# hmmscan :: search sequence(s) against a profile database
# HMMER 3.2.1 (June 2018); http://hmmer.org/
# Copyright (C) 2018 Howard Hughes Medical Institute.
# Freely distributed under the BSD open source license.
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query sequence file:             /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Schizosaccharomyces_octosporus_yFS286-SO6/GCA_000150505.2_SO6_protein.faa
# target HMM database:             /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm
# output directed to file:         /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Schizosaccharomyces_octosporus_yFS286-SO6/GCA_000150505.2_SO6_protein.PFam32-A
# per-seq hits tabular output:     /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Schizosaccharomyces_octosporus_yFS286-SO6/GCA_000150505.2_SO6_protein.PFam32-A.tblout
# number of worker threads:        20
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query:       EPX70414.1  [L=2088]
Description: hypothetical protein SOCG_06266 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.8e-18   66.9   0.0    4.7e-18   65.6   0.0    1.7  1  Helicase_C      Helicase conserved C-terminal domain
    3.9e-10   39.8   0.1    1.4e-09   38.0   0.0    1.9  2  DEAD            DEAD/DEAH box helicase
      1e-05   25.6   4.0    2.5e-05   24.4   0.0    3.4  4  ResIII          Type III restriction enzyme, res subunit
    0.00063   20.2   0.6      0.002   18.6   0.1    2.2  2  OrsD            Orsellinic acid/F9775 biosynthesis cluster pr
  ------ inclusion threshold ------
      0.074   12.6   0.0       0.15   11.5   0.0    1.4  1  PS_Dcarbxylase  Phosphatidylserine decarboxylase
       0.41   10.3   2.2         26    4.5   0.8    2.8  2  zf-C2H2_12      Zinc-finger C2H2-type


Domain annotation for each model (and alignments):
>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.6   0.0   1.6e-21   4.7e-18      11     110 ..    1527    1632 ..    1514    1633 .. 0.87

  Alignments for each domain:
  == domain 1  score: 65.6 bits;  conditional E-value: 1.6e-21
                  HHTTTTSEEEEEESSHHHHHHHHHHHHHT.......TSTEEEESTTSTHHHHHHHHHHHH..TTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHH CS
  Helicase_C   11 kleeeggkilifvntidrlekvklllekk.......gikvavlhgelpqnereeileqfn..kgesdvLiatdvaerGidipkvnlVinfdlprnvt 98  
                  +  e +g++++f++++ ++   ++l++k           +++++g+l   er++++e+f+  +g++++++at++ + Gid  +v+lV++++lp +  
  EPX70414.1 1527 NVYEGDGRVIVFCQKKHEV---EYLQRKIqrsdlfpCTDATIYTGDLDEAERKKSFEKFRnpNGRTRIMVATKAFGLGIDYGEVRLVVHYGLPNSCM 1620
                  4567899************...566333344567888999*******************9888********************************** PP

                  HHHHHHTTSSST CS
  Helicase_C   99 syiqriGRtgRa 110 
                  +y q  GR+gR 
  EPX70414.1 1621 QYAQETGRAGRD 1632
                  ***********6 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1       1.3   3.9e+03     138     169 ..    1234    1271 ..    1226    1277 .. 0.36
   2 !   38.0   0.0   4.6e-13   1.4e-09      12     172 ..    1326    1477 ..    1316    1481 .. 0.75

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 1.3
                  THHHHHHHHHHSHHHCTTSTTT......SEEEEEESSB CS
                  xxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxx RF
        DEAD  138 fsdfinrilnqlpqitcdgklq......rqvivlSATl 169 
                    + +++i +++++ ++  ++       + +   +AT+
  EPX70414.1 1234 CNPILKEIRESTKELKSMLHSAkqaveeEATATATATA 1271
                  44444444444443333333211222211133333333 PP

  == domain 2  score: 38.0 bits;  conditional E-value: 4.6e-13
                  HTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCSEEEEEHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   12 lgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvdivvgtpgrl 108 
                   g++++++  +T+sGK+l fl+p+l  + +++ ++++ +l+v+P  +L e++++++++ +    +++  + ++ + +     l + +d+++ t +  
  EPX70414.1 1326 QGQKNLIIVLPTASGKSLSFLLPAL--I-DKTIRPNNTTLVVVPAISLREDMMRRVNETGL---VECTNTWTQYRNQPVTPSL-KLPDLFILTYESA 1415
                  4678*********************..3.445778889******************99999...4555666777777777777.77********999 PP

                  HHHH......HCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHH CS
                  xxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  109 ddll......stgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkd 172 
                  ++        s g     ++  +V+DEa+ ll +  s + n+ l q p+ ++       + +lS T+p+ 
  EPX70414.1 1416 LSNSalaffeSLG--VAGRLARVVVDEAHSLLTD--STWRNT-LLQAPRLSALFA---PIHLLSGTFPRP 1477
                  9965566543323..3889999**********98..444444.444433333322...377777777755 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.3       1.2   3.4e+03      97     122 ..     603     637 ..     569     651 .. 0.65
   2 ?   -2.4   0.3       1.4   4.1e+03      56      96 ..     926     967 ..     912     983 .. 0.57
   3 !   24.4   0.0   8.3e-09   2.5e-05      21     154 ..    1320    1454 ..    1260    1473 .. 0.80
   4 ?   -0.6   0.1      0.39   1.2e+03      89     127 ..    1750    1792 ..    1727    1799 .. 0.72

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 1.2
                 .......-SEEEEEHHHHHHTH............. CS
      ResIII  97 kekdstnkkilvttiqsldadseee.........e 122
                    ++++++i+++++++ld+++e e         e
  EPX70414.1 603 DDDNDNDNDIIMMEEEALDESEEIEreralqlelE 637
                 4455679999******9999996655555443331 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.4
                 -EEEEESSHHHHHHHHHHGGGGTGG.....GEEEESSS-B-- CS
      ResIII  56 kflflvprkslleqtleefkkflseayke.igkkvsgdkkka 96 
                 +fl lv r + ++  +e ++  +++ ++  +++++++++k++
  EPX70414.1 926 RFLPLVSRDDFYDYFEELVQANKKKSQNGtQEQDWTDKEKEK 967
                 677777777777666655555555554445555555555555 PP

  == domain 3  score: 24.4 bits;  conditional E-value: 8.3e-09
                  .......TTSEEEEEESTTSTHHHHH..HHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--.......-SEEEEE CS
      ResIII   21 s.....krdkrglikmaTGtGKTlva..aklierllkkgkeekflflvprkslleqtleefkkflseaykeigkkvsgdkkkakekdstnkkilvtt 110 
                  s     +++k+++i+++T +GK+l     +li++  +  +++ +l++vp +sl e ++++++++   +    ++ +++ ++++   + +  ++++ t
  EPX70414.1 1320 SvyfsvQGQKNLIIVLPTASGKSLSFllPALIDKTIR--PNNTTLVVVPAISLREDMMRRVNETGLVEC---TNTWTQYRNQPVTPSLKLPDLFILT 1411
                  266666899*************987622456666665..567*******************99999884...55566666666566888889***** PP

                  HHHHHHTH........HHHTTT-SEEEEETGGGTTS.TTTHHHH CS
      ResIII  111 iqsldadseeeeeeseellrdrfdviiiDEaHrlgakkswreil 154 
                  ++s+ ++s      +     +r   +++DEaH l  +++wr+ l
  EPX70414.1 1412 YESALSNSAL-AFFESLGVAGRLARVVVDEAHSLLTDSTWRNTL 1454
                  ***9999933.344444455555699**********99***943 PP

  == domain 4  score: -0.6 bits;  conditional E-value: 0.39
                  ESSS-B--...........-SEEEEEHHHHHHTH........H CS
      ResIII   89 vsgdkkka....kekdstnkkilvttiqsldadseeeeeesee 127 
                   +g++k++    +++  ++k+i v  +qs+++++e+e+e+++ 
  EPX70414.1 1750 GNGNGKDErnflESSTPKSKSIKVGHTQSFSSEKEKEKEMTTP 1792
                  4455555566777889999***************777666655 PP

>> OrsD  Orsellinic acid/F9775 biosynthesis cluster protein D
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.1   6.7e-07     0.002      13     114 .]     236     337 ..     228     337 .. 0.83
   2 ?   -3.7   0.0       5.6   1.7e+04      42      72 ..    1252    1282 ..    1232    1294 .. 0.44

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 6.7e-07
        OrsD  13 iCreCkyavlpselerHLrkrhrqlk.rektqelletvehemslrqldelareaeavslpsaesepipgLpvy.eGyrC..rakakCkyltrslktlrk 107
                  C eC   + ++++++H+++ h+  + ++++++l ++++h + +++ + +  ++   s+     + i gLpv  +Gy+C  + + +  ++    +t  +
  EPX70414.1 236 SCVECGGLLDVEHVKSHMQNVHHVFRfEDEVENLFKQMNHIDLKSPST-V-SNERSSSWE--TYPCIFGLPVLlNGYECtiCFDSGGGFVHGIADTFYR 330
                 599********************9973456788999998888888888.4.455555555..556799****99*****988899999*********** PP

        OrsD 108 Hlqkkhg 114
                 H++++hg
  EPX70414.1 331 HVRRHHG 337
                 ***9995 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 5.6
        OrsD   42 tqelletvehemslrqldelareaeavslps 72  
                   ++ +++ve+e +    +  ++++e+ s+ +
  EPX70414.1 1252 LHSAKQAVEEEATATATATATATKEQPSWSD 1282
                  2233333333322222222334444444444 PP

>> PS_Dcarbxylase  Phosphatidylserine decarboxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   5.2e-05      0.15      42     157 ..     990    1127 ..     970    1136 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 5.2e-05
  PS_Dcarbxylase   42 viqvKgityslrdLlgeasessadsfkngyfvviyLspgdyHryhaPvsgkveerrhipGells.......vnpsalkel............. 114 
                      v+  K  ++s +++l+ +++  a++f+++ f+ +y s g   r    v +++++ ++ + el+                +             
      EPX70414.1  990 VF-KKDLKWSKTSILNYETK--ATKFNELLFCLVYISAGQPARAKEMVHWTLKNSKYKARELYLmfgrlmiY-------Srydktrnmkfaek 1072
                      33.49999*********999..88***********************************9987733333321.......22233334566666 PP

  PS_Dcarbxylase  115 .......rglftlneRvvlview.kGkvavvpvGatnvgsivln....vlkgdel 157 
                             ++l tl  R + +++  + + + v+ G  ++  + +n    v++g++l
      EPX70414.1 1073 piprflpESLSTLALRYYALVRPfQAFLSSVKTGNKQAAAVYTNamfvVNGGKRL 1127
                      6777777677777777777777523467777777777777777666665555555 PP

>> zf-C2H2_12  Zinc-finger C2H2-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.8    0.0085        26      22      48 ..     234     257 ..     230     272 .. 0.83
   2 ?    3.9   0.0     0.013        40      37      64 ..     325     352 ..     306     356 .. 0.77

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.0085
  zf-C2H2_12  22 glvCmvCgeslaslklstikrHIrqvH 48 
                  + C+ Cg+ l    ++++k+H ++vH
  EPX70414.1 234 AVSCVECGGLL---DVEHVKSHMQNVH 257
                 67799999986...79**********9 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.013
  zf-C2H2_12  37 lstikrHIrqvHPeslslseeekeaile 64 
                  +t+ rH+r++H  +++ +e  +++ l+
  EPX70414.1 325 ADTFYRHVRRHHGRTVNVNECMRRVSLQ 352
                 58999***********999988887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2088 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1754  (0.0978303); expected 358.6 (0.02)
Passed bias filter:                      591  (0.0329634); expected 358.6 (0.02)
Passed Vit filter:                        86  (0.0047967); expected 17.9 (0.001)
Passed Fwd filter:                        29  (0.00161749); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.48u 0.38s 00:00:01.86 Elapsed: 00:00:00.62
# Mc/sec: 10159.11
//
Query:       EPX70415.1  [L=261]
Description: versicolorin reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.9e-55  187.0   0.2    4.7e-55  186.7   0.2    1.0  1  adh_short_C2   Enoyl-(Acyl carrier protein) reductase
    1.7e-47  161.4   0.7      2e-47  161.2   0.7    1.1  1  adh_short      short chain dehydrogenase
      7e-14   52.1   0.1    1.2e-13   51.4   0.1    1.2  1  KR             KR domain
     0.0019   17.7   0.2     0.0052   16.3   0.2    1.8  1  Epimerase      NAD dependent epimerase/dehydratase family
     0.0042   16.5   0.1      0.047   13.1   0.1    2.0  2  GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
  ------ inclusion threshold ------
      0.011   15.7   2.0      0.025   14.5   2.0    1.6  1  3HCDH_N        3-hydroxyacyl-CoA dehydrogenase, NAD binding d
      0.023   14.1   0.1      0.052   12.9   0.1    1.5  1  2-Hacid_dh_C   D-isomer specific 2-hydroxyacid dehydrogenase,


Domain annotation for each model (and alignments):
>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  186.7   0.2   1.8e-58   4.7e-55       3     233 ..      19     258 ..      15     259 .. 0.92

  Alignments for each domain:
  == domain 1  score: 186.7 bits;  conditional E-value: 1.8e-58
                   TTSHHHHHHHHHHHTT-EEEEEESSGGHHHHHHHHHHHTT.....SEE..EE--TTSHHHHHHHHHHHHHHH.SSEEEEEE-----EGCSS-GGGH- CS
  adh_short_C2   3 asgIGraiAkalaeeGaevvltdlneeakkrveelaeelg.....aev..lecDVtdeeqvealveevvekf.gklDilvnnagiapklkgpflets 91 
                    +gIG++iA++la++Ga+v++t+ +e++k+++++l+++++     a++  +++D +d ++ e++ve++v+ f  +++ilvnnag ++   g + +++
    EPX70415.1  19 SRGIGAGIAETLASRGAKVAITYTSESSKESTQKLVNKIKgfgtsADAisIQADLRDVTSAEHIVETTVKAFgPTIHILVNNAGCSKL--GTLGTLK 113
                   59***********************************9876765433369**********************779*************..******* PP

                   HHHHHHHHHHHTHHHHHHHHHHHHHCTSC......CEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCTGGGGS CS
  adh_short_C2  92 reefdraldvnlyslfllakaalplmkeg......gsivnlssvgaervvpnynaygaaKaalealtrylAvelgpkgiRvNavspgpikTlaasgi 182
                    e+++ ++dvn+++++ +++ ++ ++ ++      g+i+n  s+g++++++++++y+a+Kaale++tr++A elgp+g +vN v pg+++T++ +++
    EPX70415.1 114 LEDYNYIFDVNVRAVLFMSETVVGHLPKKekdgcgGRIINFGSIGGRIGLSGNSIYAASKAALEGFTRCWASELGPQGHTVNQVNPGAVDTDMLKQY 210
                   ***********************976655578899************************************************************** PP

                   TTHHHHHHHHHHHSTTSS.-B-HHHHHHHHHHHCSGGGTT--SEEEEESTTG CS
  adh_short_C2 183 kgfdelleelearaplgr.lgtpeevaeaalfLasdeasyitGqtlvvDgGl 233
                    g     e++ +++p+++ ++tp+++ae++ fLa d++++itGqt+ + gGl
    EPX70415.1 211 GGG----EAFTKMTPFENrVATPSDIAEIVSFLAEDRSRWITGQTISASGGL 258
                   965....55667777765277******************************7 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  161.2   0.7   7.9e-51     2e-47       1     190 [.      11     210 ..      11     215 .. 0.93

  Alignments for each domain:
  == domain 1  score: 161.2 bits;  conditional E-value: 7.9e-51
                 SEEEEESTTSHHHHHHHHHHHHTT-EEEE...EESCHHHHHHHHHHHHHT..TSEEEEEE-TTTSHHHHHHHHHHHHHHH.SSESEEEE---SS--SSG CS
   adh_short   1 kvvlvtGassGIGraiakelakeGakvvv...vdrseekleevakelkee..gakalaiqvDvtdreevealvekavkkl.gkldvLvnNAGitgsgpf 93 
                 kv++vtG+s+GIG  ia++la++Gakv++    ++s+e  +++++++k    +a+a+ iq+D++d +++e +ve+ vk +  ++++LvnNAG ++ g+ 
  EPX70415.1  11 KVAIVTGGSRGIGAGIAETLASRGAKVAItytSESSKESTQKLVNKIKGFgtSADAISIQADLRDVTSAEHIVETTVKAFgPTIHILVNNAGCSKLGTL 109
                 89*************************9953234567788889999998888889*************************668**************** PP

                 GGCSHHHHHHHHHHHTHHHHHHHHHHHHHHH....HCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHHHH CS
   adh_short  94 selseeewervievNltgvflltravlpaml....kqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdmak 188
                   l+ e+++ +++vN+ +v+ ++++v+ ++     ++ +GrI+n +S+ g+ ++ g + Y+AsKaa++g+tr++a el p+g +vn v+PG+vdTdm k
  EPX70415.1 110 GTLKLEDYNYIFDVNVRAVLFMSETVVGHLPkkekDGCGGRIINFGSIGGRIGLSGNSIYAASKAALEGFTRCWASELGPQGHTVNQVNPGAVDTDMLK 208
                 *****************************9877667778**********************************************************98 PP

                 HH CS
   adh_short 189 el 190
                 + 
  EPX70415.1 209 QY 210
                 76 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.4   0.1   4.5e-17   1.2e-13       4     166 ..      14     186 ..      12     198 .. 0.85

  Alignments for each domain:
  == domain 1  score: 51.4 bits;  conditional E-value: 4.5e-17
                 EEETTTSHHHHHHHHHHHHHHS-.EEEEE-SS..--HHHHHHHHHHHHTT-EEEE..----TT-HHHHHHHHHHHHHHS.S---EEEE---------TT CS
          KR   4 litGGlGgLGlelarwlaekgar.hlvllsRsaaadedskaliaelealgaevev..vaaDvsdkdavealleeikaee.ppikGvihaAgvlrdklle 98 
                 ++tGG  g+G  +a++la++ga+  + ++s s  ++e+ ++l+++++  g++ ++  ++aD+ d ++ e+++e+  + + p+i+  ++ Ag ++ ++l 
  EPX70415.1  14 IVTGGSRGIGAGIAETLASRGAKvAITYTSES--SKESTQKLVNKIKGFGTSADAisIQADLRDVTSAEHIVETTVKAFgPTIHILVNNAGCSKLGTLG 110
                 8********************77145566666..7888889*******998766511689**************999999******************* PP

                 T--HHHHHHHHTTTTHHHHHHHHHTTT....S--S....EEEEEEEHHHHH--TT-HHHHHHHHHHHHHHHHHHHH CS
          KR  99 emtaedleqvlapKvkGawnLhelled....esld....ffvlfSSiagllgsagqanYaaaNaflDalaeyrrsq 166
                 +++ ed++ ++   v+++  + e++      ++ d     ++ f Si+g +g  g + Yaa  a l+++ + ++s+
  EPX70415.1 111 TLKLEDYNYIFDVNVRAVLFMSETVVGhlpkKEKDgcggRIINFGSIGGRIGLSGNSIYAASKAALEGFTRCWASE 186
                 *******************9999875545545555333369****************************9988764 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.2     2e-06    0.0052       2     158 ..      14     185 ..      13     199 .. 0.69

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 2e-06
                 EEETTTSHHHHHHHHHHHHCTSE.EEEEES-STTTTCHHCHHC..........EEEE--TT-HHHHHHHHHHHT-SEEEE--S---HHHHHHSHHHHHH CS
   Epimerase   2 lVtGatGfiGsalvkallekgye.vigldrlssasntarledl..........elveldltdrsalerlfkeeqpdavihlAavggvaassedpadfie 89 
                 +VtG++  iG+ +++ l+++g +  i+ +++ss++ t++l ++            +++dl+d ++ e +++    ++v  ++   ++ +++   ++   
  EPX70415.1  14 IVTGGSRGIGAGIAETLASRGAKvAITYTSESSKESTQKLVNKikgfgtsadaISIQADLRDVTSAEHIVE----TTVKAFGPTIHILVNNAGCSK--- 105
                 8********************99788888888888888888879**9999998889999999988888887....455555447888887777555... PP

                 HHTHHHHHHHH..HHHHHTCTEEEEEEEGGGGTSCSSSS....BSTCSTTS--......--SSHHHHHHHHHHHHHHHHHH CS
   Epimerase  90 knlqgtlnlle..aarkagvkrllflsSsevYGkdaeqp....keettltgpl......kpnspYaaaKlageklveayaa 158
                   + gtl+l +  ++++ +v r + + S +v G  +++         ++ g++        ns Yaa+K+a e  ++ +a 
  EPX70415.1 106 LGTLGTLKLEDynYIFDVNV-RAVLFMSETVVGHLPKKEkdgcGGRIINFGSIggriglSGNSIYAASKAALEGFTRCWAS 185
                 45677777755114555566.666666778888655521123433333333333333667788888888887777766665 PP

>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.1   1.8e-05     0.047       2      73 ..      15      85 ..      14     100 .. 0.82
   2 ?    1.2   0.0     0.074   1.9e+02     149     170 ..     165     186 ..     161     199 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.8e-05
                   EETTTSHHHHHHHHHHHHCT-CCEEEEEEESS.-TTHHHHHCTTT...TTGCCEEEEE--TT-HHHHHHHHHH CS
  GDP_Man_Dehyd  2 iTGiaGfiGsylaelLlekgyevhgivrrsss.fntgriehlakdpkeeleenlklhkgDltDssslerllae 73
                   +TG++  iG+ +ae L ++g +v ++   +ss  +t+++ +  k   + ++ +   +++Dl+D +s e++++ 
     EPX70415.1 15 VTGGSRGIGAGIAETLASRGAKVAITYTSESSkESTQKLVNKIK--GFGTSADAISIQADLRDVTSAEHIVET 85
                   9****9*****************998775544056666665544..5667789999************99986 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.074
                    --SHHHHHHHHHHHHHHHHHHH CS
  GDP_Man_Dehyd 149 PrsPYaaaKlyadwivvnyrea 170
                     +s Yaa+K++ + +++ +  +
     EPX70415.1 165 GNSIYAASKAALEGFTRCWASE 186
                    689*********9999987765 PP

>> 3HCDH_N  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   2.0   9.6e-06     0.025       1      85 [.      11      85 ..      11      91 .. 0.70

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 9.6e-06
                EEEEE--SC..CHHHHHHHHHHTT-EEEEE-S-HHHHHHHHHHHHHHHHCCTTTTSS-HHHHCCCHHCEEEES-HHHHHC-SEEEE- CS
     3HCDH_N  1 kvaviGaGt..mGagiaavfasagleVvlvdiseealekalekieksleklvekgklkeeeveaalarisfttdleeavdadlviEa 85
                kva++  G   +Gagia+ +as+g +V ++ +se++ e+ ++ ++k ++            + + ++ is+++dl+++++a+ ++E+
  EPX70415.1 11 KVAIVTGGSrgIGAGIAETLASRGAKVAITYTSESSKESTQKLVNK-IK-----------GFGTSADAISIQADLRDVTSAEHIVET 85
                577776665449*******************999888877777665.22...........233344556666666666666666665 PP

>> 2-Hacid_dh_C  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1     2e-05     0.052      38     125 ..      11      99 ..       4     104 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2e-05
                   EEEEES-SH..HHHHHHHHHHHTT-EEEEESSSHHHHHCHHHHTCEECSHHHHHHH-SEEEE-S--STTTT.TSBSHHHHHCSTTTE.EEEE CS
  2-Hacid_dh_C  38 tvGiiGlGr..IGqavakrlkafgmkviaydrskkkeeeeeelgvelvsleellaesDivslhlpltpetr.hlinaeelakmkkga.iliN 125
                   +v+i+  G+  IG  +a++l++ g+kv ++ +s++++e++   +  + +++ +  ++D +s+ + l + t  + i +++ +++ ++  il+N
    EPX70415.1  11 KVAIVTGGSrgIGAGIAETLASRGAKVAITYTSESSKEST---QKLVNKIKGFGTSADAISIQADLRDVTSaEHIVETTVKAFGPTIhILVN 99 
                   45555444334****************9998887755523...334679*****************99885245666666666666435666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       525  (0.0292822); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.53u 0.32s 00:00:00.85 Elapsed: 00:00:00.52
# Mc/sec: 1503.05
//
Query:       EPX70416.1  [L=225]
Description: hypothetical protein SOCG_04789 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        6.6    5.3  11.6       0.78    8.3   6.6    1.7  2  EMP70     Endomembrane protein 70


Domain annotation for each model (and alignments):
>> EMP70  Endomembrane protein 70
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.4     0.028     5e+02     328     351 ..      27      50 ..      16      64 .. 0.59
   2 ?    8.3   6.6   4.3e-05      0.78     273     354 ..      72     150 ..      51     154 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.028
       EMP70 328 kwkkntlltalllpgllflvffll 351
                 +wk+ ++ t ++++++  +vf+ +
  EPX70416.1  27 RWKTPVIGTVTIITIIYNIVFIAI 50 
                 555555555555555554444443 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 4.3e-05
       EMP70 273 qlllmalvtlllallgfls.psnrgslltvalllyvllgliaGYvsarlyktfggekwkkntlltalllpgllflvffllnli 354
                   ++++l+ +l      +    ++ ++ ++a  lyv++  + G++  ++ k + + +  +n++l a+ +  ++++vf+ ln i
  EPX70416.1  72 GSICTSLLAILYI----YPeWYRQAGFNMCAAALYVCFLNVPGFAMYYTAKKIMQFEKINNLFLYAVCFVDFVLFVFISLNPI 150
                 3333333333333....3224678889999*******************999986799*********************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       699  (0.0389871); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.28s 00:00:00.74 Elapsed: 00:00:00.50
# Mc/sec: 1362.60
//
Query:       EPX70417.1  [L=140]
Description: hypothetical protein SOCG_04788 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       256  (0.0142785); expected 358.6 (0.02)
Passed bias filter:                      244  (0.0136092); expected 358.6 (0.02)
Passed Vit filter:                         8  (0.000446204); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.44
# Mc/sec: 953.23
//
Query:       EPX70418.1  [L=297]
Description: D-tagatose 3-epimerase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.6e-32  112.0   0.0    4.5e-32  111.2   0.0    1.3  1  AP_endonuc_2    Xylose isomerase-like TIM barrel
  ------ inclusion threshold ------
      0.049   13.4   0.1        0.1   12.3   0.1    1.6  1  AP_endonuc_2_N  AP endonuclease family 2 C terminus


Domain annotation for each model (and alignments):
>> AP_endonuc_2  Xylose isomerase-like TIM barrel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.2   0.0     5e-36   4.5e-32       1     208 [.      18     211 ..      18     218 .. 0.90

  Alignments for each domain:
  == domain 1  score: 111.2 bits;  conditional E-value: 5e-36
                   HHHHHHCT-SEEEEECCTCSHHHHCHHHHHHHHHHHHHHTTSEEEEEEECCCHSTCTHCHTTCS..HHHHHHHHHHHHHHHHHHTBSEEEEEBCCGB CS
  AP_endonuc_2   1 laaaaeaGfdgvElfgrdlvpvselsdeelrelrkaldelglriaslslftrfgypdederear..reesvdalkraielaaaLGapllvlhpGtag 95 
                   l++a+e+G++++El+g + +         ++e +k+l+++ l++++  +     +++    ++   r+  v+++k+ i++aa LG+++  l p t g
    EPX70418.1  18 LKRASELGYESIELAGIPEQYP-------IEETKKLLEKYRLKCWGTVTLQMGDHDLAA--SKPeqRKMTVQYIKDVIDMAAGLGGKITSLVPVTVG 105
                   689*************999999.......59**************98777777776663..333589999************************977 PP

                   CTTTSGHH.HHHHHHHHHHHHHHHHHHHHTSEEEEE--TTTTSSSTC..HHHHHHHHHHTTTTEEEEEEHHHHHHHTTTHHHHHHHHHGGEEEEEE. CS
  AP_endonuc_2  96 agpkgsee.eawerlaeslneladyaekegvklalEtlagsgvelgd..eelarlldavdspnvgvclDtgHlliaeedvddalraladrikhvHik 189
                    +++ s +   w+ ++e+l+e+ ++a  +g+k++lE+l+++++++++  +++++l dav+ p +g++lD++Hl+i+e+++ +a++  ++ri  vH+ 
    EPX70418.1 106 KLAPTSTPeNEWNWVVEGLKEVHKHALSRGIKVGLEPLNRFETYFLNriDQALALADAVG-PEMGIALDPFHLNIEEANMFSAIKSAGKRIYDVHV- 200
                   77776665499*************************************************.66*********************************. PP

                   EESSTTTTSSTTEESTTSS CS
  AP_endonuc_2 190 DakgdlgagrdrhvpigeG 208
                           ++++++pig+G
    EPX70418.1 201 --------SDNNRLPIGDG 211
                   ........56666888777 PP

>> AP_endonuc_2_N  AP endonuclease family 2 C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   1.2e-05       0.1       1      21 [.     214     234 ..     214     235 .. 0.96

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.2e-05
  AP_endonuc_2_N   1 dwkdifsaLrqiGYdgplSiE 21 
                     dwk+i   L++iGYdg l +E
      EPX70418.1 214 DWKRIYELLKEIGYDGGLAVE 234
                     8*******************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (297 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       428  (0.0238719); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.31s 00:00:00.83 Elapsed: 00:00:00.49
# Mc/sec: 1833.98
//
Query:       EPX70419.1  [L=83]
Description: hypothetical protein SOCG_04786 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      2e-28   98.1  10.5      3e-14   52.8   1.2    2.2  2  Con-6         Conidiation protein 6
  ------ inclusion threshold ------
      0.012   15.3   1.8      0.083   12.6   0.6    2.1  2  PLN_propep    Protealysin propeptide
       0.18   11.7   0.2         18    5.3   0.0    2.3  2  MEF2_binding  MEF2 binding


Domain annotation for each model (and alignments):
>> Con-6  Conidiation protein 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.8   1.2     5e-18     3e-14       1      34 []       3      36 ..       3      36 .. 0.94
   2 !   50.4   2.4   2.8e-17   1.7e-13       8      32 ..      50      74 ..      48      76 .. 0.94

  Alignments for each domain:
  == domain 1  score: 52.8 bits;  conditional E-value: 5e-18
       Con-6  1 dpenvirGyKAtLsNPnvSeeAKehAkeeLeklg 34
                + ++v +G+KA+L+NPnvS+e K+h +e Le+ g
  EPX70419.1  3 HSTRVNAGHKAALHNPNVSDETKQHEREYLENEG 36
                578****************************865 PP

  == domain 2  score: 50.4 bits;  conditional E-value: 2.8e-17
       Con-6  8 GyKAtLsNPnvSeeAKehAkeeLek 32
                GyKAt +NPnvSeeAK+hAk+eLe 
  EPX70419.1 50 GYKATTHNPNVSEEAKQHAKDELEH 74
                ***********************96 PP

>> PLN_propep  Protealysin propeptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0     0.039   2.3e+02      15      28 ..      19      32 ..      16      33 .. 0.81
   2 ?   12.6   0.6   1.4e-05     0.083      15      34 ..      59      78 ..      56      82 .. 0.88

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.039
  PLN_propep 15 ngdeeqRacArrtL 28
                n+++e++++ r+ L
  EPX70419.1 19 NVSDETKQHEREYL 32
                699****9988766 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 1.4e-05
  PLN_propep 15 ngdeeqRacArrtLeHVqsl 34
                n++ee +++A++ LeH + l
  EPX70419.1 59 NVSEEAKQHAKDELEHNEKL 78
                69**************7765 PP

>> MEF2_binding  MEF2 binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0    0.0062        37       9      15 ..      20      26 ..      18      30 .. 0.88
   2 ?    5.3   0.0     0.003        18       9      18 ..      60      69 ..      58      72 .. 0.86

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.0062
  MEF2_binding  9 ISEETKQ 15
                  +S+ETKQ
    EPX70419.1 20 VSDETKQ 26
                  79***** PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.003
  MEF2_binding  9 ISEETKQKLK 18
                  +SEE KQ  K
    EPX70419.1 60 VSEEAKQHAK 69
                  7******877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       968  (0.0539907); expected 358.6 (0.02)
Passed bias filter:                      261  (0.0145574); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.27s 00:00:00.68 Elapsed: 00:00:00.44
# Mc/sec: 565.69
//
Query:       EPX70420.1  [L=539]
Description: catalase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   1.2e-190  633.6   1.3   1.3e-190  633.5   0.7    1.3  2  Catalase      Catalase
    1.4e-15   57.2   1.2    4.7e-15   55.6   0.1    2.5  3  Catalase-rel  Catalase-related immune-responsive
  ------ inclusion threshold ------
       0.16   12.8   0.5       0.44   11.3   0.2    1.8  2  Glyoxalase_6  Glyoxalase-like domain


Domain annotation for each model (and alignments):
>> Catalase  Catalase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  633.5   0.7  2.1e-194  1.3e-190       2     379 ..      43     421 ..      42     424 .. 0.99
   2 ?   -3.6   0.0      0.75   4.5e+03     197     229 ..     492     524 ..     479     528 .. 0.82

  Alignments for each domain:
  == domain 1  score: 633.5 bits;  conditional E-value: 2.1e-194
                 -TTS-B-S-SSS-EEESTTS-BBTT-HHHHHHHHHHHT------SS--SEEEEEEEEEESS--TTT---GGGSSTT-EEEEEEEEE-SS--TT--SSSS CS
    Catalase   2 tseGapvsdnqnsltagerGplllqdvhlieklahfdreripeRvvhAkGagahgeFevtkdisdltkakllskvgkktpvlvRfStvagekgsadtaR 100
                 t++G+p+ ++ +s ++g+ Gp+llqd+hli+ ++hfdreripeRvvhAkG+gahg+Fe+tkdi+++tk +++skvgkktp+l+RfStv+ge+g++d+aR
  EPX70420.1  43 TNTGCPIFNPLASARIGKGGPVLLQDFHLIDIFQHFDRERIPERVVHAKGSGAHGVFECTKDITQYTKHTMFSKVGKKTPMLARFSTVGGERGTPDSAR 141
                 799************************************************************************************************ PP

                 S--EEEEEEEETTEEEEEEEESSSS-S-S-GGGHHHHHHHHSB-TTT-SB-HHHHHHHHHT-GGGHHHHHHHHSGG.GSBS-GGGS-EE--S-EEEE-T CS
    Catalase 101 dvrGfavkfyTeeGnwDlvgnntpvFfirDpikfpdlihsqkrepqtnlkdaamfwdflslnpeslhqvlilfsdr.gipksyrhmngygvhtfklvnk 198
                 d+rGfa+kfyTe+G++D+vgnntp FfirDp+kfp +ih+qkr+pqt++kd++mfwd+ls+n+es+hqv+ilfsdr g+p +yr mng+++ht+k+vn+
  EPX70420.1 142 DPRGFALKFYTEDGIFDMVGNNTPTFFIRDPAKFPVFIHTQKRNPQTDMKDPTMFWDYLSQNEESMHQVMILFSDRgGTPYGYRFMNGFSSHTYKFVNE 240
                 ***************************************************************************9459******************** PP

                 T--EEEEEEEEEETT---B--HHHHHHHHHH-TTHHHHHHHHHHHTT---EEEEEEEEEEHHHHTTTHHHHT-TT----TTTS--EEEEEEEEEE--S- CS
    Catalase 199 egevvyvkfhfktkqgvknltaeeaeklagedpdyatrdLyeaiekgeypewelyvqvmteeeaeklrfnilDlTkvwpekevplrevGkltLnrnpen 297
                 +g++ y+k+hf ++qg+k lt+e+a++l g++pd+a++dL++aie+g+yp+w+lyvqvmt+eeaek+r+ni+DlTkvwp+k+vp++evG++tLn+np+n
  EPX70420.1 241 KGDFYYCKWHFVSDQGTKGLTDEQAKSLDGSNPDHARKDLFDAIERGDYPSWTLYVQVMTPEEAEKYRYNIFDLTKVWPHKDVPMQEVGRFTLNQNPKN 339
                 *************************************************************************************************** PP

                 HHHHTTT----TT---TTEE--S-HHHHHHHHHHHHHHHHHT-TTGGGSGGG---..---S----TT-.....S-S---SS- CS
    Catalase 298 yFaevEqvafspsnlvpGiepseDklLqgRlfsYadtqryRlGvnyqqlpvNrpkakvanyqrdGamrveankgkepnYepn 379
                 +Fae+Eq+af+ps++vpGie+s+D++Lq R+fsY+dt+r+RlG+n++q+pvN+pk++v ny+rdG+m+v++n+g+ pnY ++
  EPX70420.1 340 FFAEIEQAAFAPSHMVPGIEISADPVLQVRTFSYPDTHRHRLGANFEQIPVNSPKCPVFNYSRDGPMNVTDNQGSMPNYPSS 421
                 *******************************************************************************776 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 0.75
                 -TT--EEEEEEEEEETT---B--HHHHHHHHHH CS
    Catalase 197 nkegevvyvkfhfktkqgvknltaeeaeklage 229
                  +++  v+ ++h+   q v++ t++ a+++a++
  EPX70420.1 492 RERQYKVFSRVHVDLGQRVREATEKVAKQVAES 524
                 566778899999999999999999999999876 PP

>> Catalase-rel  Catalase-related immune-responsive
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.1       2.1   1.3e+04       9      22 ..     191     204 ..     187     205 .. 0.77
   2 ?   -1.9   0.0      0.65   3.9e+03      14      30 ..     294     311 ..     293     328 .. 0.78
   3 !   55.6   0.1   7.8e-19   4.7e-15       7      64 ..     454     513 ..     449     514 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 2.1
                   HHHHHHHHHS-HHH CS
  Catalase-rel   9 sQagllyrsmseee 22 
                   + +++++  +s+ e
    EPX70420.1 191 KDPTMFWDYLSQNE 204
                   67999**9887765 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.65
                   HHH.HS-HHHHHHHHHHH CS
  Catalase-rel  14 lyr.smseeekerlvnni 30 
                   ly  +m++ee e    ni
    EPX70420.1 294 LYVqVMTPEEAEKYRYNI 311
                   67559****998877777 PP

  == domain 3  score: 55.6 bits;  conditional E-value: 7.8e-19
                   SSHHHHHHHH.HS..-HHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHHHH-HHHHHHHHHH CS
  Catalase-rel   7 hfsQagllyr.sm..seeekerlvnniafelskvedeeiqerqlehfakvDpdlgqrVaea 64 
                   +f+Q++++++ ++   + +++++vnn+a++ls++  +e++erq ++f++v+ dlgqrV+ea
    EPX70420.1 454 DFEQPRAFWErVLgkQPGQQDNFVNNVAGHLSGAV-PEVRERQYKVFSRVHVDLGQRVREA 513
                   8********779955578****************9.**********************997 PP

>> Glyoxalase_6  Glyoxalase-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       1.7     1e+04      44      90 ..      94     141 ..      78     149 .. 0.55
   2 ?   11.3   0.2   7.4e-05      0.44       8      75 ..     454     519 ..     447     533 .. 0.63

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.7
  Glyoxalase_6  44 aatllfqrvpe.paknrvHldl.avedldaevarlvalGArvlreprdg 90 
                   +a+ +f+ +++ + +   H+ + +v +     ar   +G+++ +++ ++
    EPX70420.1  94 GAHGVFECTKDiT-QYTKHTMFsKVGKKTPMLARFSTVGGERGTPDSAR 141
                   4455555555532.33355555555555566666667777666655554 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 7.4e-05
  Glyoxalase_6   8 dpaalaaFwaaalgwevereeaaledpegvgpaaedaatllfqrvpe......paknrvHldl..avedldaevar 75 
                   d ++  aFw+++lg +  +++   ++  +           l + vpe      ++  rvH+dl  +v ++ ++va+
    EPX70420.1 454 DFEQPRAFWERVLGKQPGQQD-NFVNNVA---------GHLSGAVPEvrerqyKVFSRVHVDLgqRVREATEKVAK 519
                   5567789**********9999.2222222.........23333344433344455569*****4444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (539 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       542  (0.0302304); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.34s 00:00:00.87 Elapsed: 00:00:00.47
# Mc/sec: 3449.54
//
Query:       EPX70421.1  [L=67]
Description: hypothetical protein SOCG_04784 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00018   21.3   0.0    0.00026   20.8   0.0    1.3  1  COX14     Cytochrome oxidase c assembly


Domain annotation for each model (and alignments):
>> COX14  Cytochrome oxidase c assembly
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.0   1.4e-08   0.00026       9      56 ..       6      50 ..       3      59 .. 0.77

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 1.4e-08
       COX14  9 laDkaHrltVltLiGvTlyaggllvytvysygkynrkqkaelierekl 56
                +++ + r+ V  L+++T+ ++++l++++  +    r++ a+l+e ek 
  EPX70421.1  6 IYNLIQRGSVSILLFGTVGGTVMLGQSYFAHK---RRRLAALKEHEKN 50
                79999*********************876544...3333335566665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       488  (0.0272185); expected 358.6 (0.02)
Passed bias filter:                      302  (0.0168442); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 467.37
//
Query:       EPX70422.1  [L=291]
Description: exosome subunit Rrp45 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-22   79.0   0.1    9.7e-22   77.9   0.0    1.6  2  RNase_PH    3' exoribonuclease family, domain 1
      3e-13   49.6   0.0    6.1e-13   48.6   0.0    1.6  1  RNase_PH_C  3' exoribonuclease family, domain 2


Domain annotation for each model (and alignments):
>> RNase_PH  3' exoribonuclease family, domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.9   0.0   1.1e-25   9.7e-22       1     132 []      32     164 ..      32     164 .. 0.94
   2 ?   -2.0   0.0      0.53   4.8e+03      17      32 ..     220     235 ..     201     272 .. 0.65

  Alignments for each domain:
  == domain 1  score: 77.9 bits;  conditional E-value: 1.1e-25
                 EEEEEEEEESSSSTTSEEEEEEECCEEEEEEEEEEEEEE-TCCG--CCEEEECCCCECCCCEC-C...S...HHHHHHHHHHHHHHCCTC-C....... CS
    RNase_PH   1 elRslsietgvlsqanGSaylelGdtkvlasvtgpieerpseerddaegaldveveyapfasgerrregrpsdeeielsrlleralrpsill....... 92 
                 ++R+l+i++g   +  G + ++lG+t v+a ++++i++ p  +  +++g + +  e++p+as++++  gr s++e+ +srl+e+a+r+s  l       
  EPX70422.1  32 DFRDLKIQFG---EDYGQVDVSLGSTRVMARISAEITK-PYSD-RPFDGIFAITTELTPLASPAFET-GRVSEQEVIISRLIEQAIRRSNALdteslci 124
                 59********...999********************99.7777.556799***************65.***********************99999999 PP

                 .CGCCTCEEEEEEEEEECCCS-CHHHCHHHHHHHHHCTCEE CS
    RNase_PH  93 .ekkpkstididitvlssdggslldalinaaslALadagip 132
                  ++++++ ++ +i+ +++dg +l da+++a++ AL++++ p
  EPX70422.1 125 vSGQKCWNVRASIHFINHDG-NLVDAACIAVITALCHFRRP 164
                 99******************.***************99876 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.53
                 EEEEEEECCEEEEEEE CS
    RNase_PH  17 GSaylelGdtkvlasv 32 
                 GS  ++l+++  ++ +
  EPX70422.1 220 GSMTVTLNKNREICQI 235
                 5555555554444444 PP

>> RNase_PH_C  3' exoribonuclease family, domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.6   0.0   6.8e-17   6.1e-13       1      65 [.     190     256 ..     190     258 .. 0.95

  Alignments for each domain:
  == domain 1  score: 48.6 bits;  conditional E-value: 6.8e-17
                 S--EEEEEEEETTE..EEES--HHHHHHSSEEEEEEEETTSEEEEEEEECSSCEEHHHHHHHHHHHH CS
  RNase_PH_C   1 apviavtvgkvddq..fvlDptkeEedlsegdltlavagtkevvtlmkeggsqldeetlleaielAk 65 
                 + +i+vt++++ d   + +D+++eEe+l++g++t+++++++e++++ k+gg  +d+ +++++ ++A 
  EPX70422.1 190 HTPICVTFSFFEDGslSAIDASLEEEELRTGSMTVTLNKNREICQIFKAGGVTIDASSVVACAHTAF 256
                 579********8877999*********************************************9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (291 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       426  (0.0237604); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 1975.52
//
Query:       EPX70423.1  [L=436]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.4e-43  143.9   4.0    2.8e-17   62.3   0.3    3.3  3  KH_1       KH domain
    5.2e-12   45.4   2.7     0.0034   17.2   0.0    3.4  3  KH_2       KH domain
    2.3e-07   30.6   1.0       0.13   12.2   0.1    3.4  3  KH_4       KH domain
    1.2e-05   25.3   1.5      0.029   14.5   0.1    3.1  3  KH_5       NusA-like KH domain
  ------ inclusion threshold ------
        0.1   12.6   0.2       0.17   11.9   0.2    1.4  1  Smg4_UPF3  Smg-4/UPF3 family


Domain annotation for each model (and alignments):
>> KH_1  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.5   0.0   7.7e-12   2.8e-08       5      64 ..     138     196 ..     134     198 .. 0.89
   2 !   48.2   0.1   1.9e-16   6.9e-13       2      64 ..     220     282 ..     219     284 .. 0.92
   3 !   62.3   0.3   7.8e-21   2.8e-17       1      65 [.     360     424 ..     360     425 .. 0.92

  Alignments for each domain:
  == domain 1  score: 33.5 bits;  conditional E-value: 7.7e-12
                 EEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEES.STT...T.-EEEEEESHHHHHHHHHHH CS
        KH_1   5 lvPsslvgriIGkgGsnIkeIreetgakIkvpk.sedegsderevtisGspeavekAkeli 64 
                 l+ ++ +g +IGk G+n+ e+r  t++k  v k  ++   ++r++t+sGs e+v +A + i
  EPX70423.1 138 LLSTREAGIVIGKAGKNVAELRTSTNVKAGVTKaVPNV--HDRVLTVSGSLENVVRAYRFI 196
                 677889*****************89*****99877776..****************98877 PP

  == domain 2  score: 48.2 bits;  conditional E-value: 1.9e-16
                 EEEEEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEESSTT....T.-EEEEEESHHHHHHHHHHH CS
        KH_1   2 lrilvPsslvgriIGkgGsnIkeIreetgakIkvpksedeg.sderevtisGspeavekAkeli 64 
                 lr+l+ +sl+g+iIGk+G +Ik+I++++++++     ++ + s+er+v++ G+ e+ ++A+ +i
  EPX70423.1 220 LRLLIAHSLMGSIIGKNGLRIKHIQDKCNCRMIAS-KDMLPqSTERTVEVHGTVENLHAAIWEI 282
                 6899**********************99***9966.777779******************9988 PP

  == domain 3  score: 62.3 bits;  conditional E-value: 7.8e-21
                 EEEEEEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEESSTT....T.-EEEEEESHHHHHHHHHHHH CS
        KH_1   1 tlrilvPsslvgriIGkgGsnIkeIreetgakIkvpksedeg.sderevtisGspeavekAkelie 65 
                 t+ i++P+++vg+iIG+gGs+I eIr+ +g kI +   e+++ ++er++ti+G+ e  ekA+ l++
  EPX70423.1 360 TQNISIPADMVGCIIGRGGSKISEIRRTSGSKISIA-KEPHDeTGERMFTITGTHEENEKALFLLY 424
                 5779***********************77*****99.777888**********9999****99986 PP

>> KH_2  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   0.1   2.3e-05     0.083      32      54 ..     140     162 ..     130     173 .. 0.84
   2 !   17.2   0.0   9.4e-07    0.0034      15      58 ..     207     251 ..     195     289 .. 0.85
   3 !   13.8   0.2   1.1e-05     0.039      35      59 ..     369     393 ..     356     398 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 2.3e-05
                 EESCHHHHHTGGGHHHHHHHHHH CS
        KH_2  32 resqpgivIGkgGsnikkigkel 54 
                  + + givIGk G+n+ ++++  
  EPX70423.1 140 STREAGIVIGKAGKNVAELRTST 162
                 56789**************9876 PP

  == domain 2  score: 17.2 bits;  conditional E-value: 9.4e-07
                 EEEEEEECCS.CEEEEEEEESCHHHHHTGGGHHHHHHHHHHHHHH CS
        KH_2  15 vskveIerta.nrviiviresqpgivIGkgGsnikkigkelrkdi 58 
                 +++  Ie +a +++++ i  s +g +IGk+G +ik i+ + + ++
  EPX70423.1 207 ADGTPIEPAApRKLRLLIAHSLMGSIIGKNGLRIKHIQDKCNCRM 251
                 567778885559*************************99877666 PP

  == domain 3  score: 13.8 bits;  conditional E-value: 1.1e-05
                 CHHHHHTGGGHHHHHHHHHHHHHHH CS
        KH_2  35 qpgivIGkgGsnikkigkelrkdie 59 
                   g +IG+gGs+i +i+ + + +i 
  EPX70423.1 369 MVGCIIGRGGSKISEIRRTSGSKIS 393
                 5799****************99995 PP

>> KH_4  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.1   3.6e-05      0.13      27      59 ..     131     163 ..     122     171 .. 0.83
   2 !    8.9   0.0   0.00038       1.4      27      55 ..     216     244 ..     194     249 .. 0.83
   3 !    6.2   0.1    0.0026       9.4      29      52 ..     359     382 ..     354     386 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 3.6e-05
        KH_4  27 eeveielnvegedlGrvIGkrGrtldAlqylvs 59 
                 ++ +++  +++ + G+vIGk G+++  l++ ++
  EPX70423.1 131 QQLTLRALLSTREAGIVIGKAGKNVAELRTSTN 163
                 56677888899*************999998666 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00038
        KH_4  27 eeveielnvegedlGrvIGkrGrtldAlq 55 
                   ++++l ++ + +G +IGk+G  ++ +q
  EPX70423.1 216 APRKLRLLIAHSLMGSIIGKNGLRIKHIQ 244
                 5678999***************9888776 PP

  == domain 3  score: 6.2 bits;  conditional E-value: 0.0026
        KH_4  29 veielnvegedlGrvIGkrGrtld 52 
                 v+ ++++  + +G +IG+ G  ++
  EPX70423.1 359 VTQNISIPADMVGCIIGRGGSKIS 382
                 56689999999*********9876 PP

>> KH_5  NusA-like KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1      0.46   1.6e+03      19      34 ..     144     159 ..     140     183 .. 0.84
   2 !    8.2   0.0   0.00072       2.6      19      37 ..     229     247 ..     224     280 .. 0.85
   3 !   14.5   0.1   8.1e-06     0.029      17      50 ..     368     400 ..     360     407 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.46
        KH_5  19 vGaivgkkGsrikavs 34 
                 +G ++gk G+++ ++ 
  EPX70423.1 144 AGIVIGKAGKNVAELR 159
                 7889999999998765 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.00072
        KH_5  19 vGaivgkkGsrikavsseL 37 
                 +G+i+gk+G rik + ++ 
  EPX70423.1 229 MGSIIGKNGLRIKHIQDKC 247
                 79*************9986 PP

  == domain 3  score: 14.5 bits;  conditional E-value: 8.1e-06
        KH_5  17 dpvGaivgkkGsrikavsseLkgekidvvewseD 50 
                 d vG i+g++Gs+i+++ +   g ki + ++  D
  EPX70423.1 368 DMVGCIIGRGGSKISEIRRTS-GSKISIAKEPHD 400
                 88*****************98.*****9998766 PP

>> Smg4_UPF3  Smg-4/UPF3 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.2   4.6e-05      0.17      48      99 ..       8      59 ..       4     133 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 4.6e-05
   Smg4_UPF3 48 lkeskysrayinfkdpedlvqfakkfdghvFvDskgnespaivefApyqkvp 99
                +  ++ s ay +f  p+++ + +++f +++F+D+ +++s + v  ++ +  p
  EPX70423.1  8 NSVPVSSMAYNHFAIPKSIEEKENSFFDVTFQDEPEDASAPAVTASLSKVPP 59
                566789*************************************998876544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (436 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       807  (0.0450109); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 3052.25
//
Query:       EPX70424.1  [L=520]
Description: membrane transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-44  152.2  24.8    8.3e-44  149.9  24.5    1.8  2  MFS_1     Major Facilitator Superfamily
    8.9e-06   25.2   4.9    8.9e-06   25.2   4.9    2.2  2  MFS_4     Uncharacterised MFS-type transporter YbfB
    0.00056   19.9   0.6       0.69    9.9   0.0    3.0  3  LRR19-TM  Leucine-rich repeat family 19 TM domain


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.9  24.5   1.4e-47   8.3e-44       2     353 .]      80     443 ..      79     443 .. 0.88
   2 ?    0.2   0.0     0.047   2.8e+02     151     174 ..     459     482 ..     446     496 .. 0.64

  Alignments for each domain:
  == domain 1  score: 149.9 bits;  conditional E-value: 1.4e-47
       MFS_1   2 llaaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrr.vlllglllfalglllllfa.sslwlllvlrvlqGlg 98 
                 ++++++ +l+ ++l+ a+   +++d +is+++++ ++tl+++g++va++p++++++++ + + ++l+ ++l++++ ++l+ a ++   ll+lr+l+G++
  EPX70424.1  80 CITYMIQYLDKTALSYAALYGMKNDTHISGHTYSSMTTLFYVGYLVAQYPAAYIMQKV-PLSlFILVNVILWSAM-VCLMAAcHNGSSLLALRFLAGVF 176
                 799***************99**************************************.6665999999999999.444423455446*********** PP

       MFS_1  99 agalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslg....Wravfyilaivsllafvlfllllpeepperkrkspkeee..... 188
                 +++++pa + ++a w+++ee+++ + +++a+++ + i+g +l+  l +       Wr++f++++++sl+++++ ++++p +p++ +  s++e++     
  EPX70424.1 177 EASITPAFINITAMWYKREEQPMRTLCWYAFNGTAQIVGSILSYGLGHIHQkissWRYIFIVIGLLSLVWGLI-FIFIPSNPTKARFLSHRERRialer 274
                 ********************************************99966669999***************995.4777777777777777777799999 PP

       MFS_1 189 .......kgtgpaplvpawkallkdpvlwillialllfffgfsglltllplylqevlglsglllaglllallalvgailallagrlsdrlgrrrrllla 280
                           + +++++aw+a++ ++v+  +++ + +++++++g+ ++++l+    lg++  l +++l + l+++ +++++++g l + ++  r l+ a
  EPX70424.1 275 vrenrtgLENKTFKVSQAWEAFRDPQVI--MITLFTGICMITNGIGVFSTLI-INGLGYN-ELKSTVLNMPLGAIEIAAMVVSGILCKIFKEGRLLIGA 369
                 88877665555555555***********..9999999999***********7.*******.788888888888888888******************** PP

       MFS_1 281 llllllaalglallavtssavllllvlvliGfglgfvfpsllalasdlappeeagtasglfn.tagslggalgp 353
                 +  +l ++ +++++  + +++ + lv v +++ +   +++ll+l+s+++      +++ ++  +++s+g +++p
  EPX70424.1 370 FCNCLNLVGCIMIWKIPATNPYGRLVGVWFTMWVPAGSALLLSLISSNVAGYTKKSVTNATVfVFYSIGNIVAP 443
                 *****************9***********99*999999999999999997766667777776588889999987 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.047
       MFS_1 151 ravfyilaivsllafvlfllllpe 174
                 +a+ ++l+++ ++af+l + +l+e
  EPX70424.1 459 QAMIVALCLIIFIAFLLTGYYLYE 482
                 444444555555555554444444 PP

>> MFS_4  Uncharacterised MFS-type transporter YbfB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   4.9   1.5e-09   8.9e-06      18     173 ..     100     257 ..      94     276 .. 0.80
   2 ?    0.9   0.4     0.038   2.3e+02     291     348 ..     401     462 ..     358     476 .. 0.60

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 1.5e-09
       MFS_4  18 allaegqlslsqagllaaaNylGYLvGallaafalsagaeRlrllagllatvllllamaltesfaaflliRflaGvasAvv...lvfgsslvlahaaaa 113
                  + +++++s    + + +  y+GYLv    aa+ +++ +  l +l+ +++  +++  ma+ ++ + +l++RflaGv  A +   ++ ++++  ++    
  EPX70424.1 100 GMKNDTHISGHTYSSMTTLFYVGYLVAQYPAAYIMQKVPLSLFILVNVILWSAMVCLMAACHNGSSLLALRFLAGVFEASItpaFINITAMWYKR---E 195
                 68899999********************************************************************9887532256555555555...3 PP

       MFS_4 114 rrervgallfaGvGlGiavsgllvllllqlglsassl...Wlalavlsavllllvalllpraa 173
                 +++    + +a  G   +v+++l + l + +++ ss+    +++++ls+v  l+ ++ +p ++
  EPX70424.1 196 EQPMRTLCWYAFNGTAQIVGSILSYGLGHIHQKISSWryiFIVIGLLSLVWGLI-FIFIPSNP 257
                 444444456888889999********9999999999877788899999987665.44445333 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.038
       MFS_4 291 ltflaitalvlqlarelappatrrllglmT..asfgigQilGplla..sllaeatgslalal 348
                 +   a  al l l+  +++  t++ +  +T  + + ig i++p l+  +   e+  ++++ +
  EPX70424.1 401 MWVPAGSALLLSLISSNVAGYTKKSVTNATvfVFYSIGNIVAPQLFksGQTPEYIEGIQAMI 462
                 33334445566666666666666655555522679999999998872233444555555444 PP

>> LRR19-TM  Leucine-rich repeat family 19 TM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.3       1.1   6.8e+03      18      38 ..     144     160 ..     133     165 .. 0.61
   2 !    9.9   0.0   0.00012      0.69      13      74 ..     230     291 ..     224     299 .. 0.85
   3 !    6.9   0.0     0.001         6       6      37 ..     443     474 ..     439     513 .. 0.77

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.1
    LRR19-TM  18 lvgvvvlalvtsllillaikc 38 
                 lv     +++ s ++ l++ c
  EPX70424.1 144 LVN----VILWSAMVCLMAAC 160
                 344....44445555555544 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00012
    LRR19-TM  13 ksWaylvgvvvlalvtsllillaikckllykfllsYrHrrLeeseaetyeegltenrnslse 74 
                  sW y+  v+ l  ++  li++ i  +  +  +ls r rr+  +++ +  +gl +++ ++s+
  EPX70424.1 230 SSWRYIFIVIGLLSLVWGLIFIFIPSNPTKARFLSHRERRIALERVRENRTGLENKTFKVSQ 291
                 69**************************************9999988777777666655555 PP

  == domain 3  score: 6.9 bits;  conditional E-value: 0.001
    LRR19-TM   6 aekeksgksWaylvgvvvlalvtsllillaik 37 
                 ++  ksg++ +y+ g+ ++++ ++l+i++a  
  EPX70424.1 443 PQLFKSGQTPEYIEGIQAMIVALCLIIFIAFL 474
                 566789***********************965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (520 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1091  (0.0608511); expected 358.6 (0.02)
Passed bias filter:                      567  (0.0316247); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.72u 0.35s 00:00:01.06 Elapsed: 00:00:00.53
# Mc/sec: 2944.06
//
Query:       EPX70425.1  [L=606]
Description: alpha-amylase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.5e-48  163.6   2.4    1.7e-47  162.6   2.4    1.5  1  Alpha-amylase  Alpha amylase, catalytic domain
    7.5e-12   45.4   0.2    7.5e-12   45.4   0.2    2.0  2  DUF1966        Domain of unknown function (DUF1966)
     0.0077   15.4   0.4      0.015   14.4   0.4    1.4  1  GHL10          Glycosyl hydrolase-like 10


Domain annotation for each model (and alignments):
>> Alpha-amylase  Alpha amylase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  162.6   2.4   2.9e-51   1.7e-47       1     334 [.      61     363 ..      61     369 .. 0.85

  Alignments for each domain:
  == domain 1  score: 162.6 bits;  conditional E-value: 2.9e-51
                    --CHHHHCTCCCCCCCT-SCEEE-B-CE........-S-TTTTSS-SCECCE-CCC--CCCCCCHHHHHHCTT-EEEEEE--SC--TTSCCCHCCH CS
  Alpha-amylase   1 GDLkGiiekLdYlkeLGvtaiwlsPifk........spqadhgYdiadytkidpefGtnedlkeLiskahekgikvilDlVvNHtsdehewfkesl 88 
                    G++kGi +kLdY++e+G++aiwlsPi k          +++hgY+ +d+t +++++G  +dl  Li+++h++++ v++D+ +N ++     ++  +
     EPX70425.1  61 GTWKGIQSKLDYIQEMGFNAIWLSPIDKnvegtygeDGESYHGYWNSDFTRLNEHWGSEDDLIDLINDMHNRDMWVMFDALANSMAIPGPPDNITY 156
                    99*********************************9888********************************************9999988766666 PP

                    HSTTSGGGCCC-E......ESS-STTC-TTTTCSCEE.CTTTTCEEESSS-TTS-BB-TTTCCCCCCCCC.CCCCCCTTT-SEEEETTCCCTTTCC CS
  Alpha-amylase  89 kkkgepkrdyyiwkegkeekeppnnwkslfdgsawey.dekaqeyylhlflkklpdLnteneevrkelkd.vvkfwlekgidGfRlDvvkhvskve 182
                    ++ ++ ++  y+         +p +w  + + ++ e  d++a++     +   l+dLn e+++v ++l++ +  ++ + gidG+R+D++k+++   
     EPX70425.1 157 SNLHPFNSSEYF---------HPFCWIDYASTNNTEIqDCWAGD-----DEIILADLNLESKQVSNYLNEhIHDVVRRYGIDGIRVDAIKQMNP-- 236
                    655555554444.........89***976666666554566654.....999******************8888999999**************.. PP

                    CCHCCHCCHHHHHHHHHHHTCCGTT-EEEEE-TT-SCCCHCCCC-CGG-SICECCITTCGGGCC-CTSTTSB-SS-HHHHHHHHHHHHHHS-C.CC CS
  Alpha-amylase 183 alesngeflheftqalnetvasrkevmtvgEvssdasedlrvyttearlelemvldfphldvaqkakikeqlksisakklkellkkwlkalee.aa 277
                          +f  ++ + +         v+ vgE++s + +  + ++ ++  ++     ++ + ++q++++  + +   ++ l+++ ++ ++a++    
     EPX70425.1 237 ------NFFPDYLNSAG--------VFSVGEMFSYNPD-IACSVRNQ-IDS-----ITTYPIRQGIEFAFNNTGAAFQYLQQIDMQFQQACSGqDM 311
                    ......9*****99988........899******8886.33333333.332.....3455566666665666666788888888888888888556 PP

                    TTCEEES--TTS--HHHHTTSSTTTTHHHHHHHHHCCCTSSSEEEEETTCCCT---- CS
  Alpha-amylase 278 eeavtflgnHDqeRilsrlgddsaeaekklklaaillltlrGvpviYyGeEigmtgg 334
                    +  ++fl+nHD +R    + d+s     + k a ++ll+ +G+p+iYyG+E+++tgg
     EPX70425.1 312 SIVANFLENHDLPRYPYITDDES-----QNKGAIVFLLLHTGIPIIYYGQEQHLTGG 363
                    67789**********99999999.....89*************************98 PP

>> DUF1966  Domain of unknown function (DUF1966)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.4   0.2   1.3e-15   7.5e-12      11      85 ..     422     491 ..     413     494 .. 0.92
   2 ?   -2.9   0.6       1.4   8.6e+03      41      46 ..     545     550 ..     518     567 .. 0.47

  Alignments for each domain:
  == domain 1  score: 45.4 bits;  conditional E-value: 1.3e-15
     DUF1966  11 lrKgpegsqvvtvlsnkGssgssytlslkssgyaagtevvdvlsCksvtvdssgeltvtmekGePrvlvpkskle 85 
                 ++Kg     v+ v sn  s+++++  ++  s +++gt v +vls ++ tv+ssg l+vt+++G+P+v++p++ l 
  EPX70425.1 422 VQKGD----VLGVYSNFESNSDKVAYDVG-SNFEEGTVVREVLSNTTATVGSSGTLQVTITTGMPQVYYPEASLT 491
                 56666....9******************7.****************************************99876 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.4
     DUF1966  41 sgyaag 46 
                 + y++g
  EPX70425.1 545 RTYTSG 550
                 233333 PP

>> GHL10  Glycosyl hydrolase-like 10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.4   2.4e-06     0.015      55     162 ..     105     230 ..      64     246 .. 0.66

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 2.4e-06
       GHL10  55 wselktgkkgedpGrDvLaevideahkrnlkvlaWF.evglnak............elselvkahPa.sltvqkrdevktsesaage.rlw...lnPli 135
                 w+   t  + +   +D L ++i++ h+r++ v+      ++  +            + ++    hP  ++   + ++++   + ag+ ++    ln   
  EPX70425.1 105 WNSDFTRLNEHWGSEDDLIDLINDMHNRDMWVMFDAlANSMAIPgppdnitysnlhPFNSSEYFHPFcWIDYASTNNTEIQDCWAGDdEIIladLNLES 203
                 554444444444457888899999999998886333433333335566666666667777777788546767777777777766665245512245556 PP

       GHL10 136 PevqdfitklvvevvkrYdvDgvqlDD 162
                  +v +++ + + +vv+rY +Dg+++D 
  EPX70425.1 204 KQVSNYLNEHIHDVVRRYGIDGIRVDA 230
                 78999*******************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (606 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       935  (0.0521501); expected 358.6 (0.02)
Passed bias filter:                      527  (0.0293937); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.33s 00:00:00.99 Elapsed: 00:00:00.49
# Mc/sec: 3733.47
//
Query:       EPX70426.1  [L=213]
Description: endoplasmic reticulum membrane protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-15   57.1   0.0    2.6e-15   56.7   0.0    1.2  1  Vma12     Endoplasmic reticulum-based factor for assembly of 


Domain annotation for each model (and alignments):
>> Vma12  Endoplasmic reticulum-based factor for assembly of V-ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.7   0.0   1.5e-19   2.6e-15      60     132 ..      68     166 ..      16     168 .. 0.75

  Alignments for each domain:
  == domain 1  score: 56.7 bits;  conditional E-value: 1.5e-19
       Vma12  60 s...........................sd.delt.aqelkevnrqlilvlNiliSvvavffavwialrsartpslpvrvllslvvallVgvAEvvvya 129
                 s                           s+ ++l  + e+k++++ql++++Ni+++vv+++favw+ ++s+   + + rv l+ + +llV++A++++y+
  EPX70426.1  68 SqdkigihelrekslydgiqllpsmagiSPdSQLLeKAENKKAKNQLSAIINIFFTVVGSTFAVWYCTSSF---QIEKRVALCGISSLLVLIADTFLYI 163
                 145555555666666666666666555522355557999********************************...9***********************9 PP

       Vma12 130 kyl 132
                 + l
  EPX70426.1 164 RFL 166
                 865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       658  (0.0367003); expected 358.6 (0.02)
Passed bias filter:                      499  (0.027832); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.30s 00:00:00.83 Elapsed: 00:00:00.50
# Mc/sec: 1284.23
//
Query:       EPX70427.1  [L=518]
Description: catalase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   2.1e-183  609.8   0.3   2.1e-183  609.8   0.3    1.8  2  Catalase      Catalase
    8.2e-15   54.8   0.1    4.7e-14   52.4   0.1    2.2  2  Catalase-rel  Catalase-related immune-responsive


Domain annotation for each model (and alignments):
>> Catalase  Catalase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  609.8   0.3  2.3e-187  2.1e-183       2     379 ..      19     397 ..      18     400 .. 0.99
   2 ?   -0.4   0.2     0.052   4.6e+02     188     231 ..     459     502 ..     448     514 .. 0.82

  Alignments for each domain:
  == domain 1  score: 609.8 bits;  conditional E-value: 2.3e-187
                 -TTS-B-S-SSS-EEESTTS-BBTT-HHHHHHHHHHHT------SS--SEEEEEEEEEESS--TTT---GGGSSTT-EEEEEEEEE-SS--TT--SSSS CS
    Catalase   2 tseGapvsdnqnsltagerGplllqdvhlieklahfdreripeRvvhAkGagahgeFevtkdisdltkakllskvgkktpvlvRfStvagekgsadtaR 100
                 ts+G+p+ ++ +s ++ge Gp+llqd+hli+  ++fdreripeRvvhAkG+ga+g+Fevt+di+++tk +++skvgkktp+l+RfS+v ge+g +d+ R
  EPX70427.1  19 TSTGCPIYNPLASARIGEGGPVLLQDFHLIDLYQKFDRERIPERVVHAKGSGAFGTFEVTNDITKYTKLNMFSKVGKKTPMLARFSQVSGEQGFPDMYR 117
                 789************************************************************************************************ PP

                 S--EEEEEEEETTEEEEEEEESSSS-S-S-GGGHHHHHHHHSB-TTT-SB-HHHHHHHHHT-GGGHHHHHHHHSGG.GSBS-GGGS-EE--S-EEEE-T CS
    Catalase 101 dvrGfavkfyTeeGnwDlvgnntpvFfirDpikfpdlihsqkrepqtnlkdaamfwdflslnpeslhqvlilfsdr.gipksyrhmngygvhtfklvnk 198
                 d+rGfa+kfyTe+G++D+vgnntp Ff+rDp+kfp +ihsqkr+pq+ l+d++ +wd+ls+n es+hqv+ilfsd  g+p +yr m+g+++ht+k+vn+
  EPX70427.1 118 DPRGFALKFYTEDGIFDMVGNNTPTFFLRDPAKFPVFIHSQKRDPQSSLRDNTVYWDYLSQNSESIHQVMILFSDLgGTPYGYRFMDGFSSHTYKFVND 216
                 ***************************************************************************736********************* PP

                 T--EEEEEEEEEETT---B--HHHHHHHHHH-TTHHHHHHHHHHHTT---EEEEEEEEEEHHHHTTTHHHHT-TT----TTTS--EEEEEEEEEE--S- CS
    Catalase 199 egevvyvkfhfktkqgvknltaeeaeklagedpdyatrdLyeaiekgeypewelyvqvmteeeaeklrfnilDlTkvwpekevplrevGkltLnrnpen 297
                 +ge+ y+k+hf ++qg+k +t+eea++++g++pd+a++dL++aie+g+yp+w+lyvqvmt+eeaek+r+ni+DlTkv+p+++vp++evG++tLn+np+n
  EPX70427.1 217 KGEFYYCKWHFLSDQGTKGMTNEEATETNGTNPDFARQDLFDAIERGDYPSWTLYVQVMTPEEAEKYRYNIFDLTKVIPHADVPMQEVGRFTLNQNPKN 315
                 *************************************************************************************************** PP

                 HHHHTTT----TT---TTEE--S-HHHHHHHHHHHHHHHHHT-TTGGGSGGG---..---S----TT-.....S-S---SS- CS
    Catalase 298 yFaevEqvafspsnlvpGiepseDklLqgRlfsYadtqryRlGvnyqqlpvNrpkakvanyqrdGamrveankgkepnYepn 379
                 +F+++Eq+afsps++ pG+++s+D++Lq R+fsY+dt+r+RlG+n++q+pvN+p+++v ny+rdG+m+v++n+g+ pnY ++
  EPX70427.1 316 FFTDIEQAAFSPSHMLPGMDISPDPVLQVRTFSYPDTHRHRLGANFEQIPVNKPRCPVFNYSRDGPMNVTDNQGSMPNYPSS 397
                 *******************************************************************************776 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.052
                 E--S-EEEE-TT--EEEEEEEEEETT---B--HHHHHHHHHH-T CS
    Catalase 188 ygvhtfklvnkegevvyvkfhfktkqgvknltaeeaeklagedp 231
                 + +++  +v +++  v+ ++h +  + +++ t++eaek+a++++
  EPX70427.1 459 HLSKAVPVVRQRQYKVFTRVHPELGSRIQEATEKEAEKVAKTQN 502
                 5566667788999999**********************998765 PP

>> Catalase-rel  Catalase-related immune-responsive
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.33   2.9e+03      14      32 ..     270     289 ..     269     307 .. 0.75
   2 !   52.4   0.1   5.2e-18   4.7e-14       5      64 ..     428     489 ..     425     490 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.33
                   HHH.HS-HHHHHHHHHHHHH CS
  Catalase-rel  14 lyr.smseeekerlvnniaf 32 
                   ly  +m++ee e    ni +
    EPX70427.1 270 LYVqVMTPEEAEKYRYNIFD 289
                   67559****99988888755 PP

  == domain 2  score: 52.4 bits;  conditional E-value: 5.2e-18
                   --SSHHHHHHHH.HS..-HHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHHHH-HHHHHHHHHH CS
  Catalase-rel   5 ddhfsQagllyr.sm..seeekerlvnniafelskvedeeiqerqlehfakvDpdlgqrVaea 64 
                   d +f+Q++++++ ++   + +++++v+n+a +lsk+  + +++rq ++f++v+p+lg+r++ea
    EPX70427.1 428 DVDFEQPRAFWErVLgkQPGQQDNFVKNVASHLSKAV-PVVRQRQYKVFTRVHPELGSRIQEA 489
                   569********779955578****************9.**********************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (518 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       609  (0.0339673); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.27s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 3543.06
//
Query:       EPX70428.1  [L=509]
Description: membrane transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.9e-23   80.9  24.4    7.9e-23   80.9  24.4    1.8  2  MFS_1     Major Facilitator Superfamily
  ------ inclusion threshold ------
      0.088   12.7   0.1       0.34   10.9   0.1    2.0  1  UPF0542   Uncharacterised protein family UPF0542
       0.85    9.3   0.0       0.85    9.3   0.0    3.5  3  DUF21     Cyclin M transmembrane N-terminal domain
        3.7    7.6   4.3        2.8    8.0   0.1    2.4  2  SNARE     SNARE domain


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.9  24.4   1.8e-26   7.9e-23       2     352 ..     102     467 ..     101     468 .. 0.83
   2 ?    0.5   4.7     0.051   2.3e+02     125     167 ..     455     497 ..     451     503 .. 0.77

  Alignments for each domain:
  == domain 1  score: 80.9 bits;  conditional E-value: 1.8e-26
       MFS_1   2 llaaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsd.......rfGrrrvlllglllfalg.lllllfa..sslw.lll 89 
                 l+  ++s +++++++p+ p  +++ lg + ++ gl++++ +l ++++ +p+  +++        +   r +l+++++ ++g ll+++ a  +++  l+l
  EPX70428.1 102 LVNSIMSDMSFGVALPTSP-SYTQKLGGTDAFSGLVVGIPTLISLLMLYPMLLFATpksakgyTL-YYRPMLVSVFAHSVGhLLYCM-AdqANWLyLIL 197
                 567789999**********.9*********************99999999999988777755422.678************777777.77899999*** PP

       MFS_1  90 vlrvlqGlgagalfpagaaliad..wfpkeergraigllsagfslGailgpllggllasslg.........Wravfyilaivsllafvlfllllpeepp 177
                 ++r++ G+g  ++f     +++d  ++ +++r++   l  ++  lG++ gp lgg+la             +++  +++  + +l++v+ ++++ e +p
  EPX70428.1 198 IGRMFNGIGF-TMFLYHKKYTTDklLVGQNRRTFLATLNILAQTLGFMAGPFLGGILAKGTRnlenrvfnqYTGGSWFMMYIWILFGVFLVIFYKEVYP 295
                 *********8.666666666666335566899999999999****************944448999999997777777777777777754455544444 PP

       MFS_1 178 erkrkspkeeekgtgpaplvpawkallkdpvlwillialllfffgfsglltllplylqevlglsglllaglllallalvgailallagrlsdrlgrrrr 276
                 +      ++    +++++ ++ ++++    +l   l+a+++  f +sg+ t +p+y+++ ++++ ++++g +++l+alv+ ++ +++++ls+ l  r +
  EPX70428.1 296 KDDHTVLEKPVDVDENSGPLS-LRHIYLLSFL--GLAAFVSY-FNISGYQTSIPIYANKLYNYN-AYQSGNFISLAALVISPFVFFSTFLSRWLEDRHI 389
                 444444444435667777777.7777777755..55555555.5********************.8********************************* PP

       MFS_1 277 lllallllllaalglallavtssavllll.vlvliGf.glgfvfpsllalasdlappeeagtasglfntagslggalg 352
                 +l++++++++a+++ ++l + ++ ++ ++ vl+ i + g+++ +++l +las+ + p+++   s lf++  sl+  +g
  EPX70428.1 390 MLIGFIIGIIALVLHLVLDTLHKIPVQAYfVLYSIMMyGFSIGSAPLVSLASKQMQPKYHVLSSVLFQVGLSLSNTVG 467
                 *********************6666666647777999999999**************************999999888 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.051
       MFS_1 125 llsagfslGailgpllggllasslgWravfyilaivsllafv.l 167
                 l+++g sl+  +g++ gg+++ s+   +   ++ ++s+++f+ +
  EPX70428.1 455 LFQVGLSLSNTVGAICGGAIY-SITTVGFIGLCIGLSVVSFIqF 497
                 78999****************.5556677788888888888732 PP

>> UPF0542  Uncharacterised protein family UPF0542
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   7.7e-05      0.34      11      44 ..     350     383 ..     344     389 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 7.7e-05
     UPF0542  11 qlvlyvakdPweFlttvlliltPllllsaflsyK 44 
                 +l  y a + ++F+    l+++P+++ s fls  
  EPX70428.1 350 KLYNYNAYQSGNFISLAALVISPFVFFSTFLSRW 383
                 678999*************************965 PP

>> DUF21  Cyclin M transmembrane N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.0   0.00019      0.85      47     106 ..     225     296 ..     212     297 .. 0.71
   2 ?    0.5   0.4     0.094   4.2e+02     124     145 ..     363     384 ..     356     413 .. 0.64
   3 ?   -0.9   1.3      0.26   1.2e+03      57      96 ..     457     495 ..     437     500 .. 0.58

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00019
       DUF21  47 knperlLstlligntlvnillsalatalfvellae...........galavviatviv.tllilvfgEilPk 106
                 +n+  +L+tl i+ +   ++++ +++ ++++   +           g++ ++ + +++ ++l+++  E+ Pk
  EPX70428.1 225 QNRRTFLATLNILAQTLGFMAGPFLGGILAKGTRNlenrvfnqytgGSWFMMYIWILFgVFLVIFYKEVYPK 296
                 67777888887777777666666666665555444899999999985555555557777************9 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.094
       DUF21 124 lrvlmvllyPlvwllskllnli 145
                 ++++  +++P+v++ + l++++
  EPX70428.1 363 ISLAALVISPFVFFSTFLSRWL 384
                 5555666666666666655554 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.26
       DUF21  57 ligntlvnillsalatalfvellaegalavviatvivtll 96 
                 ++g +l+n++ +++++a+ +++ + g +++ i + +v+++
  EPX70428.1 457 QVGLSLSNTVGAICGGAI-YSITTVGFIGLCIGLSVVSFI 495
                 566666666666666665.222222444555555555444 PP

>> SNARE  SNARE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.1   0.00061       2.8      34      52 ..     271     289 ..     262     290 .. 0.87
   2 ?   -0.0   1.0       0.2   8.9e+02      36      51 ..     388     403 ..     386     405 .. 0.77

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.00061
                 XXXXXXXXXXXXXXXXXXX CS
       SNARE  34 nRklkciillilviillvv 52 
                  ++++++i+++++++l+++
  EPX70428.1 271 GSWFMMYIWILFGVFLVIF 289
                 579***************9 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.2
                 XXXXXXXXXXXXXXXX CS
       SNARE  36 klkciillilviillv 51 
                   + i ++i +i l++
  EPX70428.1 388 HIMLIGFIIGIIALVL 403
                 5688889998888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (509 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       967  (0.053935); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.70u 0.34s 00:00:01.04 Elapsed: 00:00:00.53
# Mc/sec: 2907.17
//
Query:       EPX70429.1  [L=422]
Description: hypothetical protein SOCG_04776 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0018   18.0   8.1     0.0055   16.4   7.6    2.1  1  Pombe_5TM  Pombe specific 5TM protein
  ------ inclusion threshold ------
       0.03   14.4  11.5       0.38   10.8   9.8    3.1  2  MARVEL     Membrane-associating domain


Domain annotation for each model (and alignments):
>> Pombe_5TM  Pombe specific 5TM protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   7.6   6.2e-07    0.0055      29     134 ..     134     244 ..     110     356 .. 0.73

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 6.2e-07
   Pombe_5TM  29 enitsirktllinetgsycvaarpmtmdgaefnldlmgysvsedqin..ndeigiwnyisvae..mggvllflsy.wiwtclhfskiifpaqkviclyi 122
                  n t+    l ine+g yc a+rp+t  g+ ++  +  y    d ++   +e  +   +  a   + g+l+f++  wi+  l     i+p q  + +yi
  EPX70429.1 134 FNGTYKEDNLKINESGTYCYAVRPLTSLGSAIDSWVYYYDYDYDYVDflANESTLMLILRSAPliFTGLLFFVACiWIYLLLSQPAKILPIQYGLLVYI 232
                 4557888899********************9999999888887766433455555555555441157888887642555555556689*********** PP

   Pombe_5TM 123 flfalnqtlqek 134
                 +  a   t+++ 
  EPX70429.1 233 IAKAIGITVEDH 244
                 888887777765 PP

>> MARVEL  Membrane-associating domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.13   1.2e+03      86      99 ..       8      21 ..       2      73 .. 0.59
   2 ?   10.8   9.8   4.2e-05      0.38      44     132 ..     286     365 ..     187     367 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.13
      MARVEL 86 aallwlvafialaa 99
                ++llwl++ + + +
  EPX70429.1  8 NWLLWLISVYCILQ 21
                44555555444443 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 4.2e-05
      MARVEL  44 favfvavfsflyalfllvlylfknsaftsilwplidlivdalaallwlvafialaaglrdiscafesnqysasltvrcgqaqaavafgf 132
                 +++++++fs+l++l +l   +   + f   + +l +++++ +   +wl +  ++ + + +       n++s+s+ ++c+++ + ++  f
  EPX70429.1 286 LFMAIGGFSILVFLNILSSLT---DIFSIHIEQLSLWLITSVSNAFWLSSILVFYKEWKQ------LNTKSESSAKVCKRSLVYCIAVF 365
                 589999999998888887744...799*********************************......7999**********999887666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (422 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       787  (0.0438954); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.30s 00:00:00.86 Elapsed: 00:00:00.46
# Mc/sec: 2746.94
//
Query:       EPX70430.1  [L=156]
Description: thioredoxin peroxidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-31  108.9   0.1    1.9e-31  108.7   0.1    1.0  1  Redoxin   Redoxin
      1e-09   38.4   0.0    1.2e-09   38.1   0.0    1.1  1  AhpC-TSA  AhpC/TSA family


Domain annotation for each model (and alignments):
>> Redoxin  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.7   0.1   2.1e-35   1.9e-31       2     147 .]       4     153 ..       3     153 .. 0.95

  Alignments for each domain:
  == domain 1  score: 108.7 bits;  conditional E-value: 2.1e-35
                 TTSBB---ECCEETTCEEEEEHHHHTTSEEEEEEESTTT-HHHHHTHH.HHHTHHHHHHCSTTTEEEEEESSSHHHHHHHHH.....TT-TSEEEE-TT CS
     Redoxin   2 agdkaPdftlplaatdgnsvslsefkgkkvvvnfvpgafcPtCsaehp.yleklaellkekgvdvvavvadndafvkefwgk.....eglkfpvlsDgs 94 
                 +g+++P++tl + ++ +++v+l     +k+vv++vpgaf+P+Cs  +p y+++ + + ++kgv  ++v+a+nd f +++w+k     e+ k+++l+D +
  EPX70430.1   4 VGMPLPKVTLWE-DKPNQNVDLPT--QGKIVVVGVPGAFTPPCSSHVPgYVANEKGF-EAKGVAGIYVIAVNDVFCTAAWKKaleggEQSKVHFLADWN 98 
                 89*******977.89999999999..5778***********************9888.*****************************999********* PP

                 SHHHHHTT-TTEEE.GGG.EEE-EEEEEEETTEEEEEEESSSCHT.STTSHHHHH CS
     Redoxin  95 aaftkalGlrleedaseg.lrtpryavidedgkvvylevepepet.eesnaeavl 147
                 ++ftk +++++++    g lr++rya+i+edgkv++ +ve+e ++ ++s+a++vl
  EPX70430.1  99 GQFTKGFDATFDASGLLGpLRSKRYAAIVEDGKVTKAFVENEVTDvNVSSADNVL 153
                 **********99999999*************************88********98 PP

>> AhpC-TSA  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.1   0.0   1.4e-13   1.2e-09       4     122 ..       7     133 ..       4     135 .. 0.78

  Alignments for each domain:
  == domain 1  score: 38.1 bits;  conditional E-value: 1.4e-13
                 B----EEE.STTCEEEECHHHTTSEEEEEEESTST-CCHHHHHHHHHHCHHHCCCTTE.EEEEEESSSCHHHHHHHHH-H.....SSEEEE-TTSHHHH CS
    AhpC-TSA   4 kapdfelk.nadgetvslsdykgkpvvlffypkdwcpvCttelpalaklyeefkergv.evigvsvdspeshkkfiekes....lnfpllsDeegkvak 96 
                 + p+++l  ++  ++v+l + +g ++v++ +p++++p+C  ++p + ++ + f+++gv  ++ + v++++  ++++++ +     ++  l+D +g++ k
  EPX70430.1   7 PLPKVTLWeDKPNQNVDLPT-QG-KIVVVGVPGAFTPPCSSHVPGYVANEKGFEAKGVaGIYVIAVNDVFCTAAWKKALEggeqSKVHFLADWNGQFTK 103
                 55555555223344555555.46.6888899999***********************945777777********************************* PP

                 HTT-EETT....TTECSCEEEEE-TTSBEE CS
    AhpC-TSA  97 aygvlkee....kglalratfvidkegkir 122
                  +++ +++      l+ +    i ++gk++
  EPX70430.1 104 GFDATFDAsgllGPLRSKRYAAIVEDGKVT 133
                 *****9997766555555556666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       337  (0.0187964); expected 358.6 (0.02)
Passed bias filter:                      296  (0.0165096); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.27s 00:00:00.69 Elapsed: 00:00:00.46
# Mc/sec: 1021.30
//
Query:       EPX70431.1  [L=81]
Description: hypothetical protein SOCG_05835 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0024   17.6   0.0     0.0035   17.0   0.0    1.3  1  SAP       SAP domain


Domain annotation for each model (and alignments):
>> SAP  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0     2e-07    0.0035       1      34 [.      40      73 ..      40      74 .. 0.94

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 2e-07
                HTT--HHHHHHHHHHTT--TTS-HHHHHHHHHHH CS
         SAP  1 lskltVaeLKeeLkkrGLptsGkKaeLieRLkey 34
                l++++  +L  ++++++L+tsG   +L  R++++
  EPX70431.1 40 LKSWSKRQLILYCERNSLSTSGSYIDLLTRVEQH 73
                689********************99999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       643  (0.0358637); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.25s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 624.04
//
Query:       EPX70432.1  [L=264]
Description: orotidine 5'-phosphate decarboxylase Ura4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.8e-78  261.1   0.0      9e-78  260.9   0.0    1.0  1  OMPdecase  Orotidine 5'-phosphate decarboxylase / HUMPS famil


Domain annotation for each model (and alignments):
>> OMPdecase  Orotidine 5'-phosphate decarboxylase / HUMPS family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  260.9   0.0     5e-82     9e-78       1     225 []      33     249 ..      33     249 .. 0.98

  Alignments for each domain:
  == domain 1  score: 260.9 bits;  conditional E-value: 5e-82
                 SEEEEEE-SSSHHHHHHHHHHHGGGSSEEEEEHHHHHHHTHH.HHTHHHHHHHHHTSEEEEEEEE-S-HHHHHHHHHSTCHHHHTTESEEEEEGTGHHH CS
   OMPdecase   1 snLclalDvatarelleladkvgpsivvlKthydlvegwgfegtgaklaalarkhgflifeDrKfaDIGntvekqatagsarikewadivtvhavaGka 99 
                 snL +a+D++++ ++l+l++k+gp ++v+Kth+d++e+++ + ++++l al +kh f ifeDrKfaDIGntv++q+ +g+++i++wa+i+++h v+G++
  EPX70432.1  33 SNLSVAVDLTKKADILALIEKIGPFVCVIKTHVDVIEDFD-QDFVQQLTALSEKHRFFIFEDRKFADIGNTVKLQYSSGVYKIASWAHITNCHTVPGEG 130
                 79**************************************.55******************************************************** PP

                 HHHHHHHHHHHTTS.EEEEEESTSSGGHHHHHHHSHHHHHHHHHHHHHHHTTESEEECCCHTHHHHHHTTCSCEEEHHHTTEEEEECTTCCGGGHHHHH CS
   OMPdecase 100 svkalaeaaekwgnrgllilaqmsskgnlmlqekgytqacveaarehkaedfvmGfvaqetlnateedaddfihltpgigleqggdgkgqqyntpekli 198
                 +v++l+e+    g rgll+la+msskg+l++++  yt+ ++e a++h+  df++Gf+a+++ +  +  + dfi++ pgigl+++gdg gqqy+tp+++i
  EPX70432.1 131 IVQGLKEVGLPLG-RGLLLLAEMSSKGSLATGS--YTETTLEWAEKHS--DFCIGFIAGRRFP--NL-QHDFITMSPGIGLDVKGDGMGQQYRTPHEVI 221
                 ************7.*******************..*************..***********99..22.369**************************** PP

                 HHTTCSEEEESHHHHTSS.SHHHHHHHH CS
   OMPdecase 199 giagadiiivGRgIlkag.dpveeaery 225
                   +g+diiivGRgI++ag dpv ea+ry
  EPX70432.1 222 VNCGSDIIIVGRGIYGAGrDPVVEAQRY 249
                 **************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       544  (0.0303419); expected 358.6 (0.02)
Passed bias filter:                      518  (0.0288917); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.29s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 1796.42
//
Query:       EPX70433.1  [L=66]
Description: hypothetical protein SOCG_04773 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-09   38.3   0.2    1.2e-09   38.1   0.2    1.1  1  RAMP4     Ribosome associated membrane protein RAMP4


Domain annotation for each model (and alignments):
>> RAMP4  Ribosome associated membrane protein RAMP4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.1   0.2   6.6e-14   1.2e-09       2      58 ..       5      63 ..       4      65 .. 0.88

  Alignments for each domain:
  == domain 1  score: 38.1 bits;  conditional E-value: 6.6e-14
       RAMP4  2 qkremrrknekfaknitkrGkvpkslk..kkekkspvgpwlLglfiFVViGSaifqiir 58
                q++ +rr+n++f+kn+t+r k +++ +   k   s +   +  +f+ V++G+ai+ ++r
  EPX70433.1  5 QTPAQRRANAQFQKNVTRRVKTNSKENgaAKHPPSKIPRNIALFFLIVMCGGAILTFLR 63
                89******************999988888777888888888888888*******98887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       537  (0.0299515); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.26s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 494.27
//
Query:       EPX70434.1  [L=471]
Description: alpha-1,2-mannosyltransferase Alg11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.5e-78  262.1   0.6    2.2e-77  259.8   0.8    2.0  2  ALG11_N          ALG11 mannosyltransferase N-terminus
    1.1e-19   70.6   0.0    1.7e-19   70.0   0.0    1.2  1  Glycos_transf_1  Glycosyl transferases group 1
    4.2e-11   43.4   0.0    1.1e-10   42.0   0.0    1.7  1  Glyco_trans_1_4  Glycosyl transferases group 1
    5.3e-06   26.5   0.1    2.2e-05   24.5   0.0    2.0  2  Glyco_transf_4   Glycosyltransferase Family 4


Domain annotation for each model (and alignments):
>> ALG11_N  ALG11 mannosyltransferase N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  259.8   0.8   4.9e-81   2.2e-77       2     209 .]      55     248 ..      54     248 .. 0.98
   2 ?   -2.4   0.0      0.92   4.1e+03      82     122 ..     421     462 ..     416     469 .. 0.76

  Alignments for each domain:
  == domain 1  score: 259.8 bits;  conditional E-value: 4.9e-81
     ALG11_N   2 kivgffHPycnaggGGErVLwaavkalqkekkkvkivvYtgdlevskeeilekvkerfnieldkkrikfvaLkkrklveaktyprfTLlgqslgsvlla 100
                 ++vgffHPycnaggGGErVLw+avk++q++ ++v+ ++Ytgd  vs+ee l +vk++f+ield++++ fv+Lk r lv+++ +prfTLlgqslgs++l+
  EPX70434.1  55 RTVGFFHPYCNAGGGGERVLWTAVKSVQTDFPNVISLIYTGD-AVSSEEALGRVKTTFEIELDASKVIFVPLKLRFLVSPSVWPRFTLLGQSLGSMVLG 152
                 689***************************************.9******************************************************* PP

     ALG11_N 101 leallklvpdvfidtmGyaftyplvkllagvkvvaYvHYPtistdmlkrvkereakynnkeavakskllsllkllYyklfallYslvgsladvvmvnss 199
                 lea++++ pd+fidtmGyaft+++vk + +++v+aYvHYPtis+dmlk++             +k +l+ ++k +Y+k fa++Ys +g++a++vm+nss
  EPX70434.1 153 LEAICRFAPDIFIDTMGYAFTFVVVKEFLNIPVGAYVHYPTISSDMLKSL-------------KKVSLVGKVKGAYWKWFAKIYSQAGRHANFVMTNSS 238
                 ************************************************99.............4578999***************************** PP

     ALG11_N 200 WTknhikslw 209
                 WT+nhi slw
  EPX70434.1 239 WTQNHIASLW 248
                 ********** PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.92
     ALG11_N  82 ktyprfTLlgqslgsvllaleal.lklvpdvfidtmGyafty 122
                 ++++ +TL  q   ++ + +++  +++  +vf+   G  f+ 
  EPX70434.1 421 AYHKALTLSPQEQQEMRVNARSAcARFGEHVFMRDFGDVFAK 462
                 578899999999999988776553789999998888877765 PP

>> Glycos_transf_1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.0   0.0   3.8e-23   1.7e-19      12     170 ..     273     441 ..     263     443 .. 0.91

  Alignments for each domain:
  == domain 1  score: 70.0 bits;  conditional E-value: 3.8e-23
                      TTT-EEEEEESS-TTTTTHHHHHHHHHCCCCC.HCSCEEEEEES.......STTHHHHHHHHHHHCTTCGGGEEECCHSSSHHHHHHCESEEEE CS
  Glycos_transf_1  12 nekkkiilsvgrlekeKgvdllikafallkkq.lnpnvklviaG......ngeeekelkklaeelelsdnviflgevsredleellknadifvl 98 
                        +++ +l++++ ++eK+++ l+++fal  +q  ++++kl+++G      + +  ++lk la+ l++ ++++f+   ++ ++ e+l  +++ v 
       EPX70434.1 273 HPREPNLLYLAQYRPEKNHEDLLRSFALYVQQhPESPAKLLLVGsvrnetDIKLVESLKGLAQDLKVFEKIEFIVDAPWPKVVEYLGTCSVGVN 366
                      4678889**********************99977889*************9******************************************* PP

                      EESSBSS-HHHHHHHHTT--EEEETTTTHC.HHCHTTT...SEEEE-TT-HHHHHHHHHHHHHSH.HHHHHHHHHHH CS
  Glycos_transf_1  99 psisEgfGivllEAmaaglpviasnaggpa.evvkdge...tGllvkpnnaealaeairkllede.elrerlgenar 170
                       + +E+fGi ++E+maagl+ ++ n+ggp+ ++v ++    tG++  ++  +++aea  k+l+ + +++++++ nar
       EPX70434.1 367 YMWNEHFGIGVVEYMAAGLIPVVNNSGGPKfDIVIPWIgkpTGFHASTV--AEYAEAYHKALTLSpQEQQEMRVNAR 441
                      9999*********************8888769*************9999..88888888888877677788877776 PP

>> Glyco_trans_1_4  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.0   0.0   2.5e-14   1.1e-10       2     131 ..     277     425 ..     276     427 .. 0.75

  Alignments for each domain:
  == domain 1  score: 42.0 bits;  conditional E-value: 2.5e-14
                      EEEEEES---GG.GTHHHHHHHHHHHH.H.H...EEEEEES---........HHHHHHHT..T-T.TEEEE---..THHHHHHHH-SEEEE--. CS
  Glyco_trans_1_4   2 pvilfvGrleenvkgvdllleavpllrkk.d...vrlvivGdgprp......eeleelaa..gleerveftGfv..edlaellaaadvfvaPs. 80 
                      p++l++ ++ +++k+++ ll+ ++l  ++ +   ++l++vG+  ++      e+l+ la+  ++ e++ef      +++ e+l  ++v v+ + 
       EPX70434.1 277 PNLLYLAQY-RPEKNHEDLLRSFALYVQQhPespAKLLLVGSVRNEtdiklvESLKGLAQdlKVFEKIEFIVDApwPKVVEYLGTCSVGVNYMw 369
                      899*****9.566**********88887743578*******6542234434444443443333346677766668888**************** PP

                      .---SHHHHHHHHTT-EEEE-TGGGT.TT--....T.TSSEE--TT-HHHHHHHHHHH CS
  Glyco_trans_1_4  81 .egfglkllEamaaglpvVatdvggi.aevv....g.engllvppgdpealaeailrL 131
                       e fg+ ++E+maagl  V+ + gg+  ++v    g  +g+ ++   ++++aea  + 
       EPX70434.1 370 nEHFGIGVVEYMAAGLIPVVNNSGGPkFDIVipwiGkPTGFHAS--TVAEYAEAYHKA 425
                      99********************9985344556877436788887..788888887665 PP

>> Glyco_transf_4  Glycosyltransferase Family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1      0.39   1.7e+03     136     153 ..      12      29 ..       5      42 .. 0.83
   2 !   24.5   0.0   4.9e-09   2.2e-05      49     168 ..     137     263 ..      68     265 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.39
  Glyco_transf_4 136 rviavSeatadelreryg 153
                     ++iav +++++ l++ +g
      EPX70434.1  12 AFIAVYREIRRALCQAFG 29 
                     789999999999999888 PP

  == domain 2  score: 24.5 bits;  conditional E-value: 4.9e-09
  Glyco_transf_4  49 pllkrllrslaflrrlrrllkrekpDvv.HahspaalgaallalrrrlgiplVltvHglye..........krllkarlkplsrllralerrllr 132
                     p +  l++sl ++    +++ r+ pD+   + ++a+ ++++      l+ip+ ++vH +             +l+++ ++ +++++ +++ ++ r
      EPX70434.1 137 PRFTLLGQSLGSMVLGLEAICRFAPDIFiDTMGYAFTFVVVKEF---LNIPVGAYVHYPTIssdmlkslkkVSLVGKVKGAYWKWFAKIYSQAGR 228
                     3444555566666666788899******5555555555544443...6*********************99889999****************** PP

  Glyco_transf_4 133 radrviavSeatadelrerygvppekitVipnGvDl 168
                     +a+ v ++S +t++++++++g +  ++ V+ ++ ++
      EPX70434.1 229 HANFVMTNSSWTQNHIASLWGKD-INLSVVFPPCNT 263
                     ******************99955.788888777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (471 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       426  (0.0237604); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.45
# Mc/sec: 3119.86
//
Query:       EPX70435.1  [L=189]
Description: 60S ribosomal protein L9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.7e-33  115.1   2.3    4.5e-18   65.7   0.2    2.1  2  Ribosomal_L6  Ribosomal protein L6
  ------ inclusion threshold ------
       0.02   15.0   0.3      0.034   14.2   0.3    1.3  1  DUF5432       Family of unknown function (DUF5432)
      0.023   15.2   0.1        7.5    7.1   0.0    2.3  2  HMA           Heavy-metal-associated domain


Domain annotation for each model (and alignments):
>> Ribosomal_L6  Ribosomal protein L6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.7   0.2   7.6e-22   4.5e-18       1      76 []      13      85 ..      13      85 .. 0.98
   2 !   49.7   0.1   7.2e-17   4.3e-13       1      76 []      97     176 ..      97     176 .. 0.97

  Alignments for each domain:
  == domain 1  score: 65.7 bits;  conditional E-value: 7.6e-22
                  CSTTEEEEEETTTEEEEEESSEEEEEE-CTTSEEEEEECSTEEEEEECSESCHHHHHHHHHHHHHHHHHHHHHHTC CS
  Ribosomal_L6  1 iPvgvrvsikggqlvlvlGpkgeltreipegvtvevkvegnkvtvivvsgidkekvAligtvrslinnmikGVteg 76
                  iP+gv+v ik  + v+v+Gp+g+l+ ++++  ++e+k++gn++++iv++g++ +++ +++tv s+innmi GVt+g
    EPX70435.1 13 IPKGVNVDIKA-RQVTVTGPRGSLSKSLRHI-DLEMKKQGNVIKFIVWHGSRLHNA-CLRTVYSIINNMIIGVTQG 85
                  8*********7.******************7.************************.*****************98 PP

  == domain 2  score: 49.7 bits;  conditional E-value: 7.2e-17
                   CSTTEEEEEET..TTEEEEEESSEEEEEE-CTTSEEEEEECSTEEEEEECSESCHHHH....HHHHHHHHHHHHHHHHHHTC CS
  Ribosomal_L6   1 iPvgvrvsikg..gqlvlvlGpkgeltreipegvtvevkvegnkvtvivvsgidkekv....AligtvrslinnmikGVteg 76 
                   +P++ + s +g  ++++++lG++ ++ +++ +gvtv   +  n++++ +++g++ e+v    A+i++++ + n++i+++ +g
    EPX70435.1  97 FPININLSENGsvVEIRNFLGERITRVIKCLPGVTVS--MSSNVKDELIIEGNSLENVsqsaANIKQICNVRNKDIRKFLDG 176
                   89***********************************..55**************************************998 PP

>> DUF5432  Family of unknown function (DUF5432)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.3   5.7e-06     0.034      10      55 ..      52      96 ..      46     104 .. 0.92

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 5.7e-06
     DUF5432 10 llkfrvescssihllslhPlyvimsPmdiiGfnkyfrsdtkilfvd 55
                ++kf v   s +h   l  +y i+  m iiG  + fr++ ++ +  
  EPX70435.1 52 VIKFIVWHGSRLHNACLRTVYSIINNM-IIGVTQGFRYKMRLVYAH 96
                689***********************9.9**********9999976 PP

>> HMA  Heavy-metal-associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.0    0.0029        17      29      43 ..      17      34 ..      15      53 .. 0.74
   2 ?    7.1   0.0    0.0012       7.5      15      46 ..     119     150 ..     117     164 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0029
         HMA 29 vkvdlatktvtVeg...d 43
                v+vd ++++vtV+g   +
  EPX70435.1 17 VNVDIKARQVTVTGprgS 34
                89***********96553 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0012
         HMA  15 kvekvLselpgVesvkvdlatktvtVegdaes 46 
                 ++++v++ lpgV+    +++++++ +eg+  +
  EPX70435.1 119 RITRVIKCLPGVTVSMSSNVKDELIIEGNSLE 150
                 8***********99999999999999997654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       548  (0.030565); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1360.32
//
Query:       EPX70436.1  [L=191]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0018   18.7   1.9     0.0037   17.7   1.9    1.6  1  EF-hand_7  EF-hand domain pair


Domain annotation for each model (and alignments):
>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   1.9   2.1e-07    0.0037       7      69 ..      41     102 ..      34     104 .. 0.85

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 2.1e-07
   EF-hand_7   7 aFkelDtdgdgyldkeellrllrkifqgagegsklsdeelellfkefDtdkdGvisfdEFlkl 69 
                  F+++D  + g+ + +++l  l  i+++ +  +++  e l +++k+ D ++d+ ++++EFl++
  EPX70436.1  41 FFRLHDLAKKGFWTDRDIL-TLYGIYENDEVPFSKKNEILVDVLKKTDASQDRIVTLTEFLNF 102
                 4****************99.777888866666665556699*******************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       500  (0.0278878); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.44
# Mc/sec: 1318.03
//
Query:       EPX70437.1  [L=122]
Description: 60S ribosomal protein L35 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.2e-18   65.9   2.1    2.2e-18   65.9   2.1    2.1  2  Ribosomal_L29    Ribosomal L29 protein
  ------ inclusion threshold ------
      0.021   14.9   0.1      0.046   13.8   0.1    1.5  1  Annexin          Annexin
      0.038   14.4   1.6      0.038   14.4   1.6    2.0  2  Snapin_Pallidin  Snapin/Pallidin
      0.039   13.8   1.6      0.053   13.4   1.6    1.3  1  NOP19            Nucleolar protein 19
      0.048   13.7   1.0      0.048   13.7   1.0    2.0  2  DUF1013          Protein of unknown function (DUF1013)
      0.065   12.6  11.3      0.051   12.9   3.1    2.0  2  GAS              Growth-arrest specific micro-tubule binding
      0.087   13.5   1.4        1.8    9.3   0.1    2.2  2  SRP_SPB          Signal peptide binding domain
       0.53   10.5   5.0        4.7    7.5   1.1    2.1  2  DUF1319          Protein of unknown function (DUF1319)
       0.83   10.6   9.9         61    4.6   9.9    2.1  1  PRKG1_interact   cGMP-dependent protein kinase interacting do
        1.5    8.7   6.2        3.4    7.6   0.1    2.6  3  Prefoldin        Prefoldin subunit


Domain annotation for each model (and alignments):
>> Ribosomal_L29  Ribosomal L29 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.9   2.1   1.2e-21   2.2e-18       2      56 ..       7      62 ..       6      62 .. 0.97
   2 ?   -0.8   0.6      0.89   1.6e+03      36      36 ..     100     100 ..      80     111 .. 0.50

  Alignments for each domain:
  == domain 1  score: 65.9 bits;  conditional E-value: 1.2e-21
                   HHHHS-HHHHHHHHHHHHHHHHHHHHHHHHT.SSS-CHHHHHHHHHHHHHHHHHHH CS
  Ribosomal_L29  2 elrelsdeeLkeklkelkkeLfnLrfqkatg.qlenpsrirkvRkdIARikTvlre 56
                   elr+ s e L e+l el++eL  Lr+qk +g + +++s+i+++RkdIARi+Tv+++
     EPX70437.1  7 ELRKQSQEKLGEQLHELRQELASLRVQKIAGgSGSKLSKIKTTRKDIARILTVINQ 62
                   9*****************************98889*******************98 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.89
                    - CS
  Ribosomal_L29  36 n 36 
                     
     EPX70437.1 100 S 100
                    2 PP

>> Annexin  Annexin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.1   2.6e-05     0.046      11      42 ..      44      75 ..      40      81 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 2.6e-05
                SSSSSCHHHHHHHHHHSTHHHHHHHHHHHHHH CS
     Annexin 11 kglGtdektlieIlatRsnaqlqaifeeYkkk 42
                +++ t  k++ +Il+  ++  + a++e+Yk+k
  EPX70437.1 44 SKIKTTRKDIARILTVINQSNRLAVREAYKNK 75
                678899************************97 PP

>> Snapin_Pallidin  Snapin/Pallidin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   1.6   2.1e-05     0.038      26      82 ..      10      63 ..       4      69 .. 0.84
   2 ?    1.3   0.6      0.27   4.8e+02      40      83 ..      63     105 ..      56     110 .. 0.68

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 2.1e-05
  Snapin_Pallidin 26 rqsQeeLleqldrlnekLkeleeaqeaevlpdlkeyakKLvnikkrmsslnerlqkl 82
                     +qsQe+L eql++l+++L+   ++q+  +     + + K+++ +k++ ++ +++++ 
       EPX70437.1 10 KQSQEKLGEQLHELRQELA-SLRVQK--IAGGSGSKLSKIKTTRKDIARILTVINQS 63
                     69****************9.556677..78899999999999999999998877665 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.27
  Snapin_Pallidin  40 nekLkeleeaqeaevlpdlkeyakKLvnikkrmsslnerlqklk 83 
                      +++L+ ++ea +++    l+  +kK ++i++ ++  +++ ++lk
       EPX70437.1  63 SNRLA-VREAYKNKKYLPLDLRQKKTRAIRRALTPYEKSRKTLK 105
                      55554.44444445577788899999999999887776666655 PP

>> NOP19  Nucleolar protein 19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   1.6   2.9e-05     0.053      36     105 ..       7      76 ..       2     111 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 2.9e-05
       NOP19  36 eeekssssedkeeledskkaFfnLpvvqiGsGLsfseeeeesskedihtiGeFiksdkkvsslakkkkkk 105
                 e +k+s+++  e+l++ +++  +L+v +i +G + + ++ +++++di +i   i++ +++      k+kk
  EPX70437.1   7 ELRKQSQEKLGEQLHELRQELASLRVQKIAGGSGSKLSKIKTTRKDIARILTVINQSNRLAVREAYKNKK 76 
                 5566777778899*************87777777666667999*************99987665555444 PP

>> DUF1013  Protein of unknown function (DUF1013)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   1.0   2.7e-05     0.048      29      75 ..      44      91 ..      32     100 .. 0.87
   2 ?    0.6   0.1      0.29   5.3e+02      48      66 ..      99     117 ..      91     121 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 2.7e-05
     DUF1013 29 eeiercekdekaklklkksklelle.kkkkgkrytpvskRqdkpdaia 75
                  i+ + kd ++ l++ +++++l + +  k+k+y+p+  Rq+k  ai 
  EPX70437.1 44 SKIKTTRKDIARILTVINQSNRLAVrEAYKNKKYLPLDLRQKKTRAIR 91
                5799999********9999999888688899***************96 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.29
     DUF1013  48 klellekkkkgkrytpvsk 66 
                 k +++ k+ k++ry p+ k
  EPX70437.1  99 KSRKTLKQVKKERYFPLRK 117
                 4445558999999999876 PP

>> GAS  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   1.2     0.009        16      52      76 ..       9      33 ..       2      36 .. 0.62
   2 ?   12.9   3.1   2.8e-05     0.051      24      93 ..      42     110 ..      40     113 .. 0.87

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.009
         GAS 52 isqenkrlkepLkkaeeeveeLrkq 76
                 +q  ++l e+L+++++e++ Lr q
  EPX70437.1  9 RKQSQEKLGEQLHELRQELASLRVQ 33
                3556666777777777777777655 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 2.8e-05
         GAS  24 NLelIkslKeeieelkkkeernekelseisqenkrlkepLkkaeeeveeLrkqlknyekdkqslknlkar 93 
                  L++Ik+ +++i+++ +  ++ +++    + +nk++  pL   +++    r++l  yek ++ lk++k++
  EPX70437.1  42 KLSKIKTTRKDIARILTVINQSNRLAVREAYKNKKY-LPLDLRQKKTRAIRRALTPYEKSRKTLKQVKKE 110
                 699************999998877766666666665.69****************************985 PP

>> SRP_SPB  Signal peptide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.1   0.00098       1.8      67      89 ..      28      50 ..       7      60 .. 0.77
   2 ?    3.7   0.1     0.052        94      43      68 ..      83     106 ..      52     113 .. 0.73

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00098
                .HHHHHHHHHHTTS-HHHHHHHH CS
     SRP_SPB 67 kesRkrRiArGsGtsvqevnell 89
                 + R+++iA GsG + ++++   
  EPX70437.1 28 ASLRVQKIAGGSGSKLSKIKTTR 50
                257*************9998765 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.052
                 HHHHHHHHHTTSBHHHHHSGCG-..H CS
     SRP_SPB  43 klkrieaiidSMTkeErdspekllke 68 
                 + k++ ai +++T+ E+++++ l  +
  EPX70437.1  83 RQKKTRAIRRALTPYEKSRKT-LK-Q 106
                 5689999999****9998877.43.3 PP

>> DUF1319  Protein of unknown function (DUF1319)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.2     0.014        25      35      64 ..       3      32 ..       1      38 [. 0.88
   2 ?    7.5   1.1    0.0026       4.7       8      69 ..      45     111 ..      41     121 .. 0.72

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.014
     DUF1319 35 lkslkivkekrrslekqlkklkselkklre 64
                lk++ + k+ ++ l +ql++l++el+ lr 
  EPX70437.1  3 LKTFELRKQSQEKLGEQLHELRQELASLRV 32
                8889999999999*************9986 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0026
     DUF1319   8 evkitkrelahniaviadrvalgskvnlkslkiv.....kekrrslekqlkklkselkklrelyler 69 
                 + k t++++a  ++vi +   l+ +   k+ k +     + k r++ + l   +++ k+l++   er
  EPX70437.1  45 KIKTTRKDIARILTVINQSNRLAVREAYKNKKYLpldlrQKKTRAIRRALTPYEKSRKTLKQVKKER 111
                 5799**************9999999977776654222114455666777777888888887766555 PP

>> PRKG1_interact  cGMP-dependent protein kinase interacting domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   9.9     0.034        61       6      82 ..       6     110 ..       3     112 .. 0.67

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.034
  PRKG1_interact   6 YeeekeenerLkreLeelekelselkse.leklkqqrqe.............................svskrssllelekrerrslerkisele 70 
                     +e  k+ +e+L ++L+el++el++l+ + ++  + +  +                               +k+   l+l++++ r++ r ++ +e
      EPX70437.1   6 FELRKQSQEKLGEQLHELRQELASLRVQkIAGGSGS--KlskikttrkdiariltvinqsnrlavreaYKNKKYLPLDLRQKKTRAIRRALTPYE 98 
                     788899999999999999999999987422211111..112333344557888888877777777654445555556778888888888888888 PP

  PRKG1_interact  71 eelkeleeLrae 82 
                     ++ k+l+++++e
      EPX70437.1  99 KSRKTLKQVKKE 110
                     888888888876 PP

>> Prefoldin  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.6     0.031        56      90     111 ..      10      31 ..       4      34 .. 0.56
   2 ?   -1.9   0.1       1.6   2.9e+03      15      25 ..      46      56 ..      41      67 .. 0.43
   3 ?    7.6   0.1    0.0019       3.4       9      34 ..      84     109 ..      80     119 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.031
                 HHHHHHHHHHHHHHHHHHHHHH CS
   Prefoldin  90 ekqlekleeeleklkdqittle 111
                 ++++ekl e+l +l++++ +l+
  EPX70437.1  10 KQSQEKLGEQLHELRQELASLR 31 
                 4555566666666665555554 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.6
                HHHHHHHHHHH CS
   Prefoldin 15 lkeaieelekt 25
                +k++ +++ ++
  EPX70437.1 46 IKTTRKDIARI 56
                22222222222 PP

  == domain 3  score: 7.6 bits;  conditional E-value: 0.0019
                 HHHHHHHHHHHHHHHHHHHHHHHHTT CS
   Prefoldin   9 qaelaqlkeaieelektletlktlkk 34 
                 q+++++++ a++ +ek+++tlk +kk
  EPX70437.1  84 QKKTRAIRRALTPYEKSRKTLKQVKK 109
                 8999********************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1480  (0.0825478); expected 358.6 (0.02)
Passed bias filter:                      611  (0.0340789); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 853.53
//
Query:       EPX70438.1  [L=740]
Description: UCS-domain-containing protein Rng3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
     0.0042   17.1  11.2      0.033   14.2   0.9    3.6  3  UNC45-central  Myosin-binding striated muscle assembly centra
  ------ inclusion threshold ------
      0.024   14.8   0.9         22    5.6   0.0    3.8  2  HEAT           HEAT repeat
      0.041   14.0   0.1       0.31   11.2   0.0    2.3  2  V-ATPase_H_C   V-ATPase subunit H
       0.42   10.7  12.2       0.65   10.1   0.0    5.8  8  Arm            Armadillo/beta-catenin-like repeat


Domain annotation for each model (and alignments):
>> UNC45-central  Myosin-binding striated muscle assembly central
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.9   7.3e-06     0.033      99     138 ..     271     310 ..     167     320 .. 0.89
   2 !    4.5   0.1    0.0068        30     103     138 ..     553     588 ..     548     599 .. 0.80
   3 ?    3.5   0.7     0.014        61      87     152 ..     626     690 ..     620     691 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 7.3e-06
                    HHHHHHHHHHHTT--SSSSSHHHHHHHHHHHHHHHH-SSH CS
  UNC45-central  99 kvqlaalellsaAcidkkcrkaiaknyvewLeelvkssdd 138
                     +q+  + ll++ c  k+cr++i k+++e+L++ ++s+  
     EPX70438.1 271 CCQEDWISLLNIICDFKSCRAVIHKECSEFLKQQTHSRAA 310
                    56777899*************************9998765 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.0068
                    HHHHHHHTT--SSSSSHHHHHHHHHHHHHHHH-SSH CS
  UNC45-central 103 aalellsaAcidkkcrkaiaknyvewLeelvkssdd 138
                    ++l l + A++d++ r+ai ++  + + +l+ s+ +
     EPX70438.1 553 SLLALTNLASMDETSRQAIITKSWTAIDDLLISNHE 588
                    6789999*************9999888888877765 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.014
                    HHHHHHHS.S-HHHHHHHHHHHHTT--SSSSSHHHHHHHHHHHHHHHH-SSHH..HHHHHHTTSST CS
  UNC45-central  87 sllelveskkskkvqlaalellsaAcidkkcrkaiaknyvewLeelvkssddeklvkalAavvLaK 152
                    +l++l +  +++ ++laa+  l++ c+ ++ +ka  + y+++   +   +d++  v+ +A+v+++ 
     EPX70438.1 626 ILTALSDA-DDEATKLAACGTLVQVCSCEAGCKALLDIYSDFKFVIRMLTDENIGVQHRALVCICN 690
                    56666665.89999*************************99877777777777779*******995 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.3    0.0068        31       5      29 ..     626     651 ..     624     652 .. 0.82
   2 ?    5.6   0.0     0.005        22       4      28 ..     668     692 ..     666     694 .. 0.91

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.0068
                 HHHHHT-SSHH.HHHHHHHHHHHHHH CS
        HEAT   5 llkllsDpspe.VReaAakaLgalae 29 
                 +l++lsD + e    aA+ +L+++++
  EPX70438.1 626 ILTALSDADDEaTKLAACGTLVQVCS 651
                 6788999666648***********98 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.005
                 HHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAakaLgala 28 
                 +++++l+D++  V   A+ ++++l+
  EPX70438.1 668 FVIRMLTDENIGVQHRALVCICNLV 692
                 6899******************997 PP

>> V-ATPase_H_C  V-ATPase subunit H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.38   1.7e+03      40      84 ..     363     410 ..     355     432 .. 0.70
   2 ?   11.2   0.0   6.9e-05      0.31      44     114 ..     624     693 ..     614     695 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.38
  V-ATPase_H_C  40 nfkllkkLiklleeskd..k.tvlavalnDigelvkllpegkkvlekl 84 
                     k+l++Li+ l+ +++  + ++ a++l+++ ++  +  e ++ l++l
    EPX70438.1 363 YPKILRQLIDGLDPNSSliEvNSSAIILYNLCKFKVQKAENEQELQRL 410
                   567899999999544443324778899999988876666666666555 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 6.9e-05
  V-ATPase_H_C  44 lkkLiklleeskdktvlavalnDigelvkllpegkkvleklkaKekimellehedeevkyeALkavqkllv 114
                   lk L++l  + +d+ +   a+  + ++++     k++l+ ++  + ++++l++e+  v+ +AL ++ +l++
    EPX70438.1 624 LKILTALS-DADDEATKLAACGTLVQVCSCEAGCKALLDIYSDFKFVIRMLTDENIGVQHRALVCICNLVF 693
                   45555554.68889999*************************************************99986 PP

>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       2.7   1.2e+04       8      26 ..     360     378 ..     357     382 .. 0.65
   2 ?   -2.1   0.0         1   4.6e+03       4      17 ..     434     447 ..     431     450 .. 0.84
   3 ?   -0.7   0.0      0.38   1.7e+03       3      17 ..     473     487 ..     472     489 .. 0.86
   4 ?   -0.3   0.0      0.28   1.3e+03      13      25 ..     526     538 ..     521     543 .. 0.79
   5 ?   -0.6   0.1      0.35   1.6e+03      30      41 .]     551     562 ..     549     562 .. 0.84
   6 ?   -2.8   0.1       1.7   7.5e+03      20      40 ..     582     602 ..     581     602 .. 0.80
   7 ?    2.6   0.2     0.035   1.6e+02      17      40 ..     627     650 ..     624     651 .. 0.77
   8 ?   10.1   0.0   0.00015      0.65      18      40 ..     670     692 ..     668     693 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 2.7
                 HHHTTHHHHHHHHTT..TSSH CS
         Arm   8 vieaGavppLvrLLs..sede 26 
                 v+++   ++L +L++  +++ 
  EPX70438.1 360 VVSY--PKILRQLIDglDPNS 378
                 5555..678999999665555 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1
                 HHHHHHHTTHHHHH CS
         Arm   4 nkdavieaGavppL 17 
                  ++avi++ +++ L
  EPX70438.1 434 RIQAVISLQILQKL 447
                 589*****999988 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.38
                 HHHHHHHHTTHHHHH CS
         Arm   3 enkdavieaGavppL 17 
                 +n+ ++ ++Gav+ L
  EPX70438.1 473 GNRPELAQYGAVRFL 487
                 5999********866 PP

  == domain 4  score: -0.3 bits;  conditional E-value: 0.28
                 HHHHHHHHTTTSS CS
         Arm  13 avppLvrLLssed 25 
                 a++p ++LL +  
  EPX70438.1 526 AIDPICKLLLNSE 538
                 89*******9544 PP

  == domain 5  score: -0.6 bits;  conditional E-value: 0.35
                 HHHHHHHHHHTT CS
         Arm  30 eeAawALsNLaa 41 
                 +e++ AL+NLa+
  EPX70438.1 551 FESLLALTNLAS 562
                 67889*****96 PP

  == domain 6  score: -2.8 bits;  conditional E-value: 1.7
                 HTTTSSHHHHHHHHHHHHHHT CS
         Arm  20 LLssedeevqeeAawALsNLa 40 
                 LL s +e +q++ +  + NL+
  EPX70438.1 582 LLISNHELIQRATVELVNNLS 602
                 788999999999887777775 PP

  == domain 7  score: 2.6 bits;  conditional E-value: 0.035
                 HHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm  17 LvrLLssedeevqeeAawALsNLa 40 
                 L +L + +de ++ +A+++L   +
  EPX70438.1 627 LTALSDADDEATKLAACGTLVQVC 650
                 44555599************7666 PP

  == domain 8  score: 10.1 bits;  conditional E-value: 0.00015
                 HHHTTTSSHHHHHHHHHHHHHHT CS
         Arm  18 vrLLssedeevqeeAawALsNLa 40 
                 +r+L++e+ +vq+ A+ +++NL 
  EPX70438.1 670 IRMLTDENIGVQHRALVCICNLV 692
                 799******************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (740 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       576  (0.0321267); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.63u 0.25s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 5201.32
//
Query:       EPX70439.1  [L=357]
Description: snoRNA biogenesis protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-08   33.6  13.0      4e-08   33.0  13.0    1.3  1  zf-HIT    HIT zinc finger
  ------ inclusion threshold ------
       0.21   11.7  12.9       0.43   10.7  12.9    1.6  1  zf-MYND   MYND finger


Domain annotation for each model (and alignments):
>> zf-HIT  HIT zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.0  13.0   4.4e-12     4e-08       2      30 .]       6      35 ..       5      35 .. 0.95

  Alignments for each domain:
  == domain 1  score: 33.0 bits;  conditional E-value: 4.4e-12
                --B-TTT-S.B-SEE-TTT--EESSHHHHH CS
      zf-HIT  2 rklCgvCgf.pakYkCpkCntryCSLrCyk 30
                +k+C+vC+   +kY+Cp C+t yCSL C k
  EPX70439.1  6 SKICSVCTTnISKYRCPGCETSYCSLNCNK 35
                689*************************87 PP

>> zf-MYND  MYND finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7  12.9   4.8e-05      0.43       1      31 [.       9      38 ..       9      44 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 4.8e-05
                -TTT--.B-SC.E-TTTS-SEESSHHHHHHCH CS
     zf-MYND  1 CavCgkaealk.kCagCksvfYCskeCqradw 31
                C+vC + +  k +C+gC  + YCs +C + + 
  EPX70439.1  9 CSVCTT-NISKyRCPGC-ETSYCSLNCNKTHK 38
                ******.77778*****.889*******9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (357 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1354  (0.0755201); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.45
# Mc/sec: 2371.06
//
Query:       EPX70440.1  [L=280]
Description: CDK regulator [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.1e-72  243.2   0.3    2.7e-72  242.9   0.3    1.1  1  BCIP           p21-C-terminal region-binding protein
  ------ inclusion threshold ------
       0.59   10.2   2.2        1.6    8.8   0.0    2.6  3  Helicase_Sgs1  Sgs1 RecQ helicase


Domain annotation for each model (and alignments):
>> BCIP  p21-C-terminal region-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  242.9   0.3     3e-76   2.7e-72       2     206 .]      26     223 ..      25     223 .. 0.94

  Alignments for each domain:
  == domain 1  score: 242.9 bits;  conditional E-value: 3e-76
        BCIP   2 vnVdFeffdpeeedfhgiknLlrqlffldaeevdlseLadlileqktvGsvvkvdgeesDpvygllsvlnlkkhkekecikqlkeyllekakksass.k 99 
                 +n+dFeffdp++ dfh+ knLl+ql+  d++++++s+L+dlil+q+ +Gs+vk+dg++sDp y++lsv+nl++++e++++k+l++y+l+++++ + + +
  EPX70440.1  26 INIDFEFFDPQPIDFHAFKNLLKQLLGYDHTNINISALSDLILSQPLLGSTVKIDGNNSDP-YAMLSVINLNSRREEPVVKELTSYVLSRIATVNPTmE 123
                 9************************************************************.*********************************999* PP

        BCIP 100 kklkklLssskdkkvglliseRliNiPvevvpplykmLleeiewaqeeeeekesykfthylilskvykevkskedekkkkkkkkkkkkkkkseedeliy 198
                 k++++lLs +++++vgl+i+eRliN+Pv+vvpp+y+mLlee++wa + +   e+y+fthyl+ls+ y ev+sk d+++++ kkk+kk+     e++l+y
  EPX70440.1 124 KQVRELLSPESKAQVGLIINERLINMPVQVVPPMYNMLLEEMQWAIDAN---EPYNFTHYLLLSRSYVEVASKLDDEDEQPKKKGKKA----GEQDLCY 215
                 *******99999**********************************777...*********************998555555544443....4569*** PP

        BCIP 199 fhpEdeil 206
                 fhpEde +
  EPX70440.1 216 FHPEDEQF 223
                 *****976 PP

>> Helicase_Sgs1  Sgs1 RecQ helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1      0.54   4.8e+03      45      74 ..      20      50 ..      13      51 .. 0.65
   2 ?    8.8   0.0   0.00018       1.6      16      59 ..      92     135 ..      89     138 .. 0.90
   3 ?   -0.6   0.1      0.16   1.4e+03      17      42 ..     147     172 ..     142     186 .. 0.76

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.54
                   -SHHHHGGGS--.-HHHHHHGGGTHHHHHHH CS
  Helicase_Sgs1 45 atedeFislvgn.ndkarrkykyfkatladl 74
                   a + +Fi++  + +d++   +  fk+ l++l
     EPX70440.1 20 APDMDFINIDFEfFDPQPIDFHAFKNLLKQL 50
                   5667788886552466677777888777765 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00018
                    HHHHHHSSSS--S-SS-HHHHHHHHHH---SHHHHGGGS---HH CS
  Helicase_Sgs1  16 ainlgnrmnlpvdtylpdnilkkiAaiLPatedeFislvgnndk 59 
                    +inl +r   pv + l   +l +iA++ P  e++   l++ ++k
     EPX70440.1  92 VINLNSRREEPVVKELTSYVLSRIATVNPTMEKQVRELLSPESK 135
                    79****************************99998888777666 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.16
                    HHHHHSSSS--S-SS-HHHHHHHHHH CS
  Helicase_Sgs1  17 inlgnrmnlpvdtylpdnilkkiAai 42 
                    in+  ++++p+ ++l + + + i a 
     EPX70440.1 147 INMPVQVVPPMYNMLLEEMQWAIDAN 172
                    78888999***999987777766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       447  (0.0249317); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 1939.72
//
Query:       EPX70441.1  [L=386]
Description: tRNA-splicing endonuclease subunit Sen54 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      4e-26   91.0   0.1    8.2e-26   90.0   0.1    1.6  1  tRNA_int_end_N2  tRNA-splicing endonuclease subunit sen54 N-t
     0.0056   16.3   0.0      0.012   15.3   0.0    1.6  1  tRNA_int_endo_N  tRNA intron endonuclease, N-terminal domain


Domain annotation for each model (and alignments):
>> tRNA_int_end_N2  tRNA-splicing endonuclease subunit sen54 N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.0   0.1   9.1e-30   8.2e-26       1      71 [.      69     136 ..      69     137 .. 0.96

  Alignments for each domain:
  == domain 1  score: 90.0 bits;  conditional E-value: 9.1e-30
  tRNA_int_end_N2   1 hdalsyeRvhsskslvraiwfprdrvvvvespkarGkhfktmGvsra.rrgrlwLlpeEaLYLvErGsldir 71 
                      +dals eR+ s k++++++w+ ++++++ve  k++G++fktmG  +  +++r+wLlpeE+LYLvErGs++++
       EPX70441.1  69 YDALSVERLISFKHVIIGVWNCEKKMACVE--KVHGPFFKTMG--QGdSKNRVWLLPEETLYLVERGSMECW 136
                      69****************************..88*********..666************************ PP

>> tRNA_int_endo_N  tRNA intron endonuclease, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   1.3e-06     0.012      31      66 ..     112     148 ..      85     149 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 1.3e-06
                      CCTSSEEEEHHHHHHHHHTTSEEEE.TTSEEE-HHHH CS
  tRNA_int_endo_N  31 lidepLqLslvEAlYLlekGklevv.kggeplsfeel 66 
                      + +++  L ++E+lYL+e+G  e    +g p+s++ l
       EPX70441.1 112 DSKNRVWLLPEETLYLVERGSMECWtSQGVPMSLQSL 148
                      7889999****************99999999999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (386 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       426  (0.0237604); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2766.80
//
Query:       EPX70442.1  [L=432]
Description: ubiquinol-cytochrome-c reductase complex core protein Qcr2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.3e-20   71.3   0.0    1.6e-19   70.4   0.0    1.4  1  Peptidase_M16    Insulinase (Peptidase family M16)
    7.1e-09   35.9   0.0    2.8e-08   34.0   0.0    1.9  2  Peptidase_M16_C  Peptidase M16 inactive domain


Domain annotation for each model (and alignments):
>> Peptidase_M16  Insulinase (Peptidase family M16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.4   0.0   1.8e-23   1.6e-19      10     137 ..      44     170 ..      38     178 .. 0.94

  Alignments for each domain:
  == domain 1  score: 70.4 bits;  conditional E-value: 1.8e-23
                    SSEEEEEEEES-SGGGSCTTTTTHHHHHHHHTTSBBSSSCHHHHHHHHHHTTCEEEEEEESSEEEEEEEEEGGGHHHHHHHHHHHHHSBTTSHHHH CS
  Peptidase_M16  10 aktsavglvvdaGSryepkdlnGlAHllehmafkgTkkypsnklaeeleklGgslnAttsrentvYyvevlskdlekaldvladvfkaplleesev 105
                    ++t ++++vv aGSry p++  G+AHlle++afk+T+ +++ ++++e e lGg+l+ + + e+++ ++ +l++++e++  +la+v+ a++    ++
     EPX70442.1  44 SPTGSLSVVVRAGSRYQPDA--GVAHLLEKFAFKNTEDRSALRITRESELLGGQLSTQLTPEHIILTARFLNEYMEYYARLLAEVIDASQYLGFQL 137
                    567899**************..*******************************************************************9999999 PP

                    HHHHH.HHHHHHHHHCCHHHHHHHHHHHHHHTT CS
  Peptidase_M16 106 ererk.vvekeveavdaepekvveenlhaaayr 137
                    ++e++ +++ e +  + +p +v++ +lh++a+ 
     EPX70442.1 138 KEEVLpTAKLESSLWKGNPMNVALAKLHEKAFH 170
                    9999989999999999999**********9997 PP

>> Peptidase_M16_C  Peptidase M16 inactive domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.16   1.5e+03      56      99 ..      24      83 ..      11     126 .. 0.65
   2 !   34.0   0.0   3.1e-12   2.8e-08       5     178 ..     188     355 ..     184     359 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.16
                     SSSSSGGGSSEEEEEEEESSSSSEEEEEEEEEECT................CTHTTHHHH CS
  Peptidase_M16_C 56 gepltpatlkkppvvlkkldeeqahlslafegpsk................endeddlal 99
                     g+++ p++l++  +  +++  ++ +ls+  ++ s+                +n+ed  al
       EPX70442.1 24 GVSYAPQKLQGISFAGRETASPTGSLSVVVRAGSRyqpdagvahllekfafKNTEDRSAL 83
                     556667777777777777777888888888888884444444444444444444444444 PP

  == domain 2  score: 34.0 bits;  conditional E-value: 3.1e-12
                      HHHHHHHHHHSSGGGEEEEEEESS-HHHHHHHHHHHHTTSTHHSHCSGSCTSSSSSGGGSSEEEEEEEESSSSSEEEEEEEEEECTCTHTTHHH CS
  Peptidase_M16_C   5 edlkefykkfYrpenmvlaivGdvdheelvkliekyfgdlkaskappakptgepltpatlkkppvvlkkldeeqahlslafegpskendeddla 98 
                       ++ ++ k+ Y  +n++++  G  d +++ + + kyf+ +      +++ ++ p +    +++  +   ++   +h+ l+f+++s      ++ 
       EPX70442.1 188 SQIADYAKAAYVKSNFTVVSSG-PDVQKAADAVAKYFSVVRD----GSPLPTAPTK--VASGESRIYSSKP--MNHFLLGFPTNSA----PSAE 268
                      6899******************.******************5....3444444444..3444444444444..89***********....9999 PP

                      HHHHHHHHHSS.......TTSHHHHHHHTTTTSESEEEEE.EEEESSCEEEEEEEEEECT.THHHHHHHHHHHHHHHHHHTS-HHHHHH CS
  Peptidase_M16_C  99 lavlntlLggg.......mesrLytnlrekeglaysvsaf.ndsyrdsglfgisatadpe.nveevvevilkelrklkkeglteeeler 178
                      l vl+ +Lgg         +s L ++   k   ++   a  ++ y+d +l++i+++++    +  +    +++l+ l++  ++ e +++
       EPX70442.1 269 LYVLSSILGGRssvkwshGNSLLAKASE-KASGFKATAAAnLHPYTDASLLSIAVSGTCPkSIKATASESMQALKSLTSS-IPVETIKA 355
                      *****************77777777666.777777777777***************997747777888999999999988.66666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (432 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       337  (0.0187964); expected 358.6 (0.02)
Passed bias filter:                      288  (0.0160634); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.29s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 2803.45
//
Query:       EPX70443.1  [L=635]
Description: Rik1-associated factor Raf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.8e-13   49.1   4.4    3.3e-05   24.6   0.1    4.9  4  WD40             WD domain, G-beta repeat
    5.6e-07   29.8   0.0       0.87    9.9   0.0    4.6  5  ANAPC4_WD40      Anaphase-promoting complex subunit 4 WD40 do
     0.0034   16.4   0.2       0.34    9.8   0.0    3.1  3  Ge1_WD40         WD40 region of Ge1, enhancer of mRNA-decappi
  ------ inclusion threshold ------
      0.014   14.1   0.2      0.063   12.0   0.0    2.2  3  Lgl_C            Lethal giant larvae(Lgl) like, C-terminal
      0.074   13.3   0.0       0.17   12.1   0.0    1.6  1  Myb_DNA-binding  Myb-like DNA-binding domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.1   9.1e-09   3.3e-05       3      37 ..     279     324 ..     277     324 .. 0.82
   2 ?    4.1   0.1     0.027        96      13      38 .]     489     514 ..     477     514 .. 0.75
   3 !   17.0   0.1   2.2e-06    0.0078      16      38 .]     550     572 ..     529     572 .. 0.82
   4 ?    0.5   0.0      0.36   1.3e+03      15      38 .]     593     615 ..     580     615 .. 0.74

  Alignments for each domain:
  == domain 1  score: 24.6 bits;  conditional E-value: 9.1e-09
                 EEEEEESS.SS..........EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   3 clrtltGH.ss..........vtslafspdgawlasGsdDgtvriW 37 
                 +++ l+GH +           +++l+fs++g++l +G  D+tv++W
  EPX70443.1 279 TVQALEGHyKIncygenefstISDLCFSRNGQFLYTGAFDNTVKVW 324
                 5666778873344777788889***************99******* PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.027
                 EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  13 vtslafspdgawlasGsdDgtvriWd 38 
                 +++   s +g +++s++ D+   +Wd
  EPX70443.1 489 INHATISNSGFLVSSSGTDNQTFVWD 514
                 666667777777877677*******9 PP

  == domain 3  score: 17.0 bits;  conditional E-value: 2.2e-06
                 EEEETTSSEEEEEETTSEEEEEE CS
        WD40  16 lafspdgawlasGsdDgtvriWd 38 
                  ++ p+g+++++G+ Dg v++Wd
  EPX70443.1 550 AQWVPNGSLFVTGGSDGFVKVWD 572
                 3499*********88*******9 PP

  == domain 4  score: 0.5 bits;  conditional E-value: 0.36
                 EEEEETTSSEEEEEETTSEEEEEE CS
        WD40  15 slafspdgawlasGsdDgtvriWd 38 
                 ++ fspd + l+ ++  g v++++
  EPX70443.1 593 GV-FSPDTTKLSVCCNGGDVYMYN 615
                 33.9******98887688777765 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   0.0   0.00039       1.4      33      67 ..     292     326 ..     265     331 .. 0.80
   2 ?    4.1   0.0     0.016        57      36      79 ..     336     380 ..     322     398 .. 0.70
   3 ?   -0.7   0.0      0.49   1.8e+03      58      85 ..     419     445 ..     414     452 .. 0.81
   4 !    9.9   0.0   0.00024      0.87      33      68 ..     539     574 ..     519     590 .. 0.85
   5 ?   -0.9   0.0      0.57     2e+03      36      69 ..     585     618 ..     570     622 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00039
  ANAPC4_WD40  33 eedkedsevrsLaWkpdgklLavaysdgevrllda 67 
                    ++e s++++L+++ +g++L  +  d++v++  +
   EPX70443.1 292 YGENEFSTISDLCFSRNGQFLYTGAFDNTVKVWGM 326
                  45788899**********************98765 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.016
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdg..evrlldaesgkvvhslsvk 79 
                  ++  ++++L+ ++ +++Lava+++g   +  +d  sg +++s + +
   EPX70443.1 336 EPTDRIHKLSLSK-DNVLAVACKNGlgYMLQIDEVSGSILSSQKLA 380
                  5566777888765.58********9444555666677777766655 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.49
  ANAPC4_WD40  58 sdgevrlldaesgkvvhslsvksekavt 85 
                  s g + l+da +g+ ++ +++++e   t
   EPX70443.1 419 SRGCLALFDAINGDFIQRFNTTDEA-FT 445
                  678899*************998873.55 PP

  == domain 4  score: 9.9 bits;  conditional E-value: 0.00024
  ANAPC4_WD40  33 eedkedsevrsLaWkpdgklLavaysdgevrlldae 68 
                  ++++ d  v+  +W p+g+l++ + sdg v++ d  
   EPX70443.1 539 NQEEVDAGVTMAQWVPNGSLFVTGGSDGFVKVWDLR 574
                  67888999**********************999865 PP

  == domain 5  score: -0.9 bits;  conditional E-value: 0.57
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaes 69 
                  + d  +++  ++pd + L v ++ g v ++++ +
   EPX70443.1 585 ELDFAITHGVFSPDTTKLSVCCNGGDVYMYNIGN 618
                  566778888899***************9998866 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.19   6.7e+02     187     215 ..     297     325 ..     278     332 .. 0.81
   2 ?   -2.8   0.0      0.64   2.3e+03     189     216 ..     340     366 ..     325     369 .. 0.76
   3 !    9.8   0.0   9.5e-05      0.34     189     220 ..     589     620 ..     499     627 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.19
    Ge1_WD40 187 hsliveaafspdGtalatasedGevkffq 215
                  s+i++  fs +G  l t + d +vk + 
  EPX70443.1 297 FSTISDLCFSRNGQFLYTGAFDNTVKVWG 325
                 46888899999999999999999999875 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.64
    Ge1_WD40 189 liveaafspdGtalatasedGevkffqv 216
                  i + ++s d  +la+a+++G+  + q+
  EPX70443.1 340 RIHKLSLSKD-NVLAVACKNGLGYMLQI 366
                 5777788888.589*****998666665 PP

  == domain 3  score: 9.8 bits;  conditional E-value: 9.5e-05
    Ge1_WD40 189 liveaafspdGtalatasedGevkffqvyled 220
                  i++++fspd t l+++++ G v ++ +   +
  EPX70443.1 589 AITHGVFSPDTTKLSVCCNGGDVYMYNIGNDN 620
                 599**********************9996655 PP

>> Lgl_C  Lethal giant larvae(Lgl) like, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0      0.46   1.6e+03     142     166 ..     286     310 ..     278     314 .. 0.83
   2 ?   12.0   0.0   1.8e-05     0.063      92     130 ..     449     491 ..     434     525 .. 0.75
   3 ?   -2.3   0.0      0.39   1.4e+03       4      35 ..     590     621 ..     588     627 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.46
                 EEEEEE-TTSSSEEEEEEEEETTSE CS
       Lgl_C 142 eFsvmelggdgyssilllvGtnkGe 166
                 ++ + ++g++++s i  l+   +G+
  EPX70443.1 286 HYKINCYGENEFSTISDLCFSRNGQ 310
                 688999********99999887776 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 1.8e-05
                 EEE-BTSEEEEE..ETTSEEEEEETT..TTEEEEEEEGGG..T CS
       Lgl_C  92 lkvSniGFvAig..yesgslviiDlR..GPaviynenisekll 130
                 ++ SniGFvA     +sg++  iD R   Pa+++n++ ++   
  EPX70443.1 449 MHPSNIGFVASSnsSQSGKVYYIDTRiyQPAIVFNTSQRDINH 491
                 345*******8533789********9668******99888222 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 0.39
                 EEEEEEETTTTEEEEEETTS-EEEEEEEE--- CS
       Lgl_C   4 vksvslaaetlElavaletGeVvvfkfgknkn 35 
                 +++  ++ +t  l+v ++ G+V ++  g+ + 
  EPX70443.1 590 ITHGVFSPDTTKLSVCCNGGDVYMYNIGNDNH 621
                 66677889999999*******99999887655 PP

>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   4.8e-05      0.17       3      39 ..     122     167 ..     120     169 .. 0.94

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 4.8e-05
                      SSBHHHHHHHHHHHHHHT.TC........HHHHHHHHTSS-HHHHH CS
  Myb_DNA-binding   3 kWteeEdelLleavkkhG.nr........WkkIaerlggRtekqcr 39 
                       +t++E ++L e   k+G ++        +  I+ +++gRt ++c+
       EPX70443.1 122 DFTPQECQILQEMTMKYGpVNtvrfhdafPFNISPKIPGRTYEDCQ 167
                      69*****************888***********************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (635 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       471  (0.0262703); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.63u 0.24s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 4402.54
//
Query:       EPX70444.1  [L=977]
Description: DNA repair protein RAD16 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.1e-52  177.4   0.0      1e-51  175.8   0.0    1.8  1  SNF2_N        SNF2 family N-terminal domain
    9.4e-15   54.9   0.1    2.9e-14   53.3   0.0    1.9  2  Helicase_C    Helicase conserved C-terminal domain
    3.1e-07   30.2   7.5    3.1e-07   30.2   7.5    2.6  2  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
    5.6e-07   29.7   0.0    1.5e-06   28.3   0.0    1.8  1  ResIII        Type III restriction enzyme, res subunit
    3.1e-05   23.9   3.7    8.8e-05   22.5   3.7    1.8  1  zf-RING_UBOX  RING-type zinc-finger
     0.0002   21.4   7.3     0.0002   21.4   7.3    2.4  2  zf-C3HC4_4    zinc finger of C3HC4-type, RING
     0.0003   20.6   6.4     0.0003   20.6   6.4    2.1  2  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
     0.0013   19.0   7.8     0.0013   19.0   7.8    2.5  2  zf-RING_2     Ring finger domain
     0.0026   17.6   5.8     0.0026   17.6   5.8    2.3  2  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
  ------ inclusion threshold ------
       0.53   10.2   3.9        1.3    8.9   3.9    1.6  1  zf-RING_6     zf-RING of BARD1-type protein


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.8   0.0   5.6e-55     1e-51      51     350 .]     386     707 ..     378     707 .. 0.88

  Alignments for each domain:
  == domain 1  score: 175.8 bits;  conditional E-value: 5.6e-55
                 HHHTT--EEE---TTS--HHHHHHHHH...HHTTTS---.......S-EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH--------------- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  51 akqsvrGGiLaDemGLGKTvqvlalilaqrakeekdkekkrkdtlagptLivvPaslldqWeneierhvsssalrvlvyggqkkmkkkntkvapkllad 149
                  ++s+ GGiLaDemG+GKT+q++ l+la               ++ +ptL+v+P   + qW++ei+ h+++  l  + y gq+      ++++ + l +
  EPX70444.1 386 EESSFGGGILADEMGMGKTIQTIGLLLA--------------TPRGEPTLVVAPVVAIMQWKEEIDVHTNKA-LSTYLYYGQS------RNISSQDLLK 463
                 567899*********************2..............345689*********************998.7888888864......467788999* PP

                 --EEEE-HHHHHHHT...................TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHHHHHHH-TTTT CS
                 xxxxxxxxxxxxxxxxxx.............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 150 ydvvittYdvlsreaelq.............kkrsvlkqvewkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledlygLlkfLreepf 235
                 ydvv+t+Y+v+++   ++             k++s l++++  r++lDE+h +k+ t+++a av++L+t++r++l+GTP+qn   +l++Ll fLr +pf
  EPX70444.1 464 YDVVLTSYNVIESA--YRkersgfrrkgglvKEKSLLHNLQFYRIILDEAHGIKSRTCNTARAVCTLKTKRRICLSGTPLQNRIGELFSLLRFLRADPF 560
                 ***********944..444699***************************************************************************** PP

                 --HHHHHHHTHHHHH........................................HHHHHHHHHHHTT-STTEE---GGGT..--S---EEEEEEEEE- CS
                 xxxxxxxxxxxxxxx........................................xxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxx RF
      SNF2_N 236 gekqtfdkllqrpie........................................aqaekgrsrLlqllqrlmlrrakkdv..eknlPpkteeiiflkl 292
                      f  +lq + +                                           ++g ++ + ll+++mlrr+k +   +  lPp+++e+++  +
  EPX70444.1 561 A----FYYCLQCDCKslqwqfsdrsncdhcghkpmshtcyfnaemlkpiqkfgsdGPGRAGFAKVHRLLNNIMLRRTKLERadDLGLPPRVVEVRRDLF 655
                 9....5555555555555666688889999*****9************99999887889999999999***********9987889************* PP

                 -HHHHHHHH....................HHHHHH-HHH-HHHHHHHHHHHHH---XX CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 293 skverksYnrllevlrkkalakllkrseaalkssskskekilelllelrqacnhpqlv 350
                 +++e+ +Y+ l  ++  k+   l +  + +        ++i++l+++ rq+  hp+lv
  EPX70444.1 656 NEEEEDVYQSLYMDSKRKFNTYLAQGVVLNNY------ANIFQLITRMRQMADHPDLV 707
                 *********88888888888888888644333......458**************986 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.3   0.0   1.6e-17   2.9e-14       2     111 .]     807     921 ..     806     921 .. 0.89
   2 ?   -2.8   0.0       4.6   8.2e+03      33      55 ..     940     961 ..     928     967 .. 0.71

  Alignments for each domain:
  == domain 1  score: 53.3 bits;  conditional E-value: 1.6e-17
                 HHHHHHHHH...HHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH.TTSSS.EEEESGGGTSSSTSTTESEEEESSSSS CS
  Helicase_C   2 kleallell...kleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfn.kgesd.vLiatdvaerGidipkvnlVinfdlpr 95 
                 k+eal+e+l    ++ ++ k+++f++++++l+ +++ l+k g+++++l+g ++ + r +++e+f  + +++ +L++ ++++  +++++++ V+++d+++
  EPX70444.1 807 KIEALVEELyllRRKDRTIKSIVFSQFTSMLDLIHWRLRKAGFNCVKLDGGMTPKARAATIEAFSkDINITiFLVSLKAGGVALNLTEASQVFMMDPWW 905
                 677777777666788888899**********8777778899***********************844455569************************** PP

                 SHHHHHHHHTTSSSTT CS
  Helicase_C  96 nvtsyiqriGRtgRag 111
                 n +  +q+++R++R+g
  EPX70444.1 906 NGAVQWQAMDRIHRIG 921
                 **************97 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 4.6
                 HHHHHHTTSTEEEESTTSTHHHH CS
  Helicase_C  33 klllekkgikvavlhgelpqner 55 
                 k++ e ++ k+ ++h+++ q+er
  EPX70444.1 940 KII-ELQDKKAQMIHATIDQDER 961
                 333.5556888999999999988 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.4   6.5        10   1.8e+04      12      28 ..     581     598 ..     565     603 .. 0.77
   2 !   30.2   7.5   1.7e-10   3.1e-07       1      41 []     725     767 ..     725     767 .. 0.98

  Alignments for each domain:
  == domain 1  score: -4.4 bits;  conditional E-value: 10
                 E.E-TTS--.B-CHHHHH CS
    zf-C3HC4  12 nelleCkHs.fCskCirk 28 
                 +  + C+H+ + ++C+ +
  EPX70444.1 581 SNCDHCGHKpMSHTCYFN 598
                 46899***9999999976 PP

  == domain 2  score: 30.2 bits;  conditional E-value: 1.7e-10
                 -TTT-S--SS-E.E-TTS--B-CHHHHHHHHC...TSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepnelleCkHsfCskCirkilks...rkkvkCPlC 41 
                 C iC e+a+++   + C+H+fC+ Ci++ l+s   +++v CP C
  EPX70444.1 725 CRICDEVAQDAI-ESRCHHTFCRLCISEFLSSageSEEVACPAC 767
                 ************.*********************99999***** PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.3   0.0   8.4e-10   1.5e-06      22     169 ..     388     540 ..     350     542 .. 0.82

  Alignments for each domain:
  == domain 1  score: 28.3 bits;  conditional E-value: 8.4e-10
                 .TTSEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--.......-SEEEEEHHHHHHTH.. CS
      ResIII  22 krdkrglikmaTGtGKTlvaaklierllkkgkeekflflvprkslleqtleefkkflseaykeigkkvsgdkkkakekdstnkkilvttiqsldadsee 120
                      g+++ + G+GKT+  + l  +  +    e +l+++p  +++ q++ee+   +++a    +  + g++++++++d  + ++++t+++ + ++ ++
  EPX70444.1 388 SSFGGGILADEMGMGKTIQTIGLLLATPR---GEPTLVVAPVVAIM-QWKEEIDVHTNKAL--STYLYYGQSRNISSQDLLKYDVVLTSYNVIESAYRK 480
                 444478899999*****988777766665...469*********96.9*****99999987..788899999999999*******************88 PP

                 ................HHHTTT-SEEEEETGGGTTS.T..TTHHHHHT---SEEEEEESS- CS
      ResIII 121 e..........eeeseellrdrfdviiiDEaHrlgakk..swreilekfkeavllglTATp 169
                 e           +e+  l + +f  ii DEaH +++ +  + r+ +  +k + ++ l++Tp
  EPX70444.1 481 ErsgfrrkgglVKEKSLLHNLQFYRIILDEAHGIKSRTcnTARA-VCTLKTKRRICLSGTP 540
                 89********99999999999999************74525555.5666999********9 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   3.7   4.9e-08   8.8e-05       1      39 []     725     765 ..     725     765 .. 0.88

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 4.9e-08
  zf-RING_UBOX   1 CpIClelftdPlv.lpCGHtFCreCl.w.elskslegafkCP 39 
                   C IC e+ +d  +   C+HtFCr C+ +  +s +++ ++ CP
    EPX70444.1 725 CRICDEVAQDA-IeSRCHHTFCRLCIsEfLSSAGESEEVACP 765
                   99*******99.7446**********6488999999999999 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.8   5.7        10   1.8e+04      19      42 .]     563     586 ..     561     586 .. 0.63
   2 !   21.4   7.3   1.1e-07    0.0002       1      42 []     725     767 ..     725     767 .. 0.90

  Alignments for each domain:
  == domain 1  score: -5.8 bits;  conditional E-value: 10
  zf-C3HC4_4  19 sfClsCisslqkepdgeqllCplC 42 
                  +Cl+C  ++ + + +    C  C
  EPX70444.1 563 YYCLQCDCKSLQWQFSDRSNCDHC 586
                 589999665555544445677777 PP

  == domain 2  score: 21.4 bits;  conditional E-value: 1.1e-07
  zf-C3HC4_4   1 CPiCldYLekPvsleCGhsfClsCisslqkep.dgeqllCplC 42 
                 C+iC +  ++ +   C h+fC  Cis++  ++ ++e+++Cp C
  EPX70444.1 725 CRICDEVAQDAIESRCHHTFCRLCISEFLSSAgESEEVACPAC 767
                 ***************************9887624556****** PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   1.3       3.9   7.1e+03      23      30 ..     583     590 ..     576     595 .. 0.64
   2 !   20.6   6.4   1.7e-07    0.0003       2      40 .]     725     767 ..     724     767 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 3.9
  zf-C3HC4_2  23 CqkCilrs 30 
                 C  C ++ 
  EPX70444.1 583 CDHCGHKP 590
                 66666665 PP

  == domain 2  score: 20.6 bits;  conditional E-value: 1.7e-07
  zf-C3HC4_2   2 CpiCldmlkdpsvvtpCgHvfCqkCilrsLee....kn.eCPlC 40 
                 C iC ++ +d+     C H+fC+ Ci + L++    ++  CP C
  EPX70444.1 725 CRICDEVAQDA-IESRCHHTFCRLCISEFLSSagesEEvACPAC 767
                 **********8.778*************9965221134579999 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   5.7       9.8   1.8e+04      13      30 ..     578     596 ..     564     604 .. 0.65
   2 !   19.0   7.8   7.3e-07    0.0013       3      43 ..     725     767 ..     723     768 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 9.8
   zf-RING_2  13 adsvlllpCgHv.fhreCl 30 
                 +d+  +++CgH  + ++C 
  EPX70444.1 578 SDRSNCDHCGHKpMSHTCY 596
                 3444455799988888886 PP

  == domain 2  score: 19.0 bits;  conditional E-value: 7.3e-07
   zf-RING_2   3 CpICleelssadsvlllpCgHvfhreClerwlrssst.....CPlC 43 
                 C IC +e+  a++++   C H+f+r C++++l s  +     CP+C
  EPX70444.1 725 CRIC-DEV--AQDAIESRCHHTFCRLCISEFLSSAGEseevaCPAC 767
                 ****.666..45555556*999*********999988999****** PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.5   5.5        10   1.8e+04      24      45 ..     563     588 ..     561     596 .. 0.73
   2 !   17.6   5.8   1.5e-06    0.0026       4      43 ..     724     767 ..     721     772 .. 0.92

  Alignments for each domain:
  == domain 1  score: -4.5 bits;  conditional E-value: 10
                 EE-HHHHHHHHH....TT-B-TTT-- CS
  zf-C3HC4_3  24 vlCeeCaekllk....rkkkCpiCrr 45 
                 ++C +C  k l+     + +C  C  
  EPX70444.1 563 YYCLQCDCKSLQwqfsDRSNCDHCGH 588
                 57888877777777777778877754 PP

  == domain 2  score: 17.6 bits;  conditional E-value: 1.5e-06
                 B-TTTSSSBS-EEETTEEEEEE-HHHHHHHHH.....TT-B-TTT CS
  zf-C3HC4_3   4 eCviClerprnvvllpCgHlvlCeeCaekllk.....rkkkCpiC 43 
                  C iC e  ++++  +C H+ +C  C +++l+     ++  Cp C
  EPX70444.1 724 VCRICDEVAQDAIESRCHHT-FCRLCISEFLSsagesEEVACPAC 767
                 7*******************.**********999999999***** PP

>> zf-RING_6  zf-RING of BARD1-type protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   3.9   0.00075       1.3      10      52 ..     725     773 ..     720     776 .. 0.72

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00075
   zf-RING_6  10 csrctdilrepvclggcehifcsncisdcfgsg.......cpvcytpawi 52 
                 c  c ++ ++      c h fc  cis+ + s        cp c+ p  i
  EPX70444.1 725 CRICDEVAQDA-IESRCHHTFCRLCISEFLSSAgeseevaCPACFIPLSI 773
                 55555555544.4678************9987334444559999999765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (977 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       985  (0.0549389); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.77u 0.31s 00:00:01.08 Elapsed: 00:00:00.49
# Mc/sec: 6016.69
//
Query:       EPX70445.1  [L=560]
Description: Rad7 Rhp7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00049   20.4  17.0        3.8    8.1   0.1    7.6 10  LRR_4       Leucine Rich repeats (2 copies)
     0.0098   15.6   0.9      0.022   14.5   0.9    1.6  1  zf-MIZ      MIZ/SP-RING zinc finger
  ------ inclusion threshold ------
      0.078   13.2   1.2        7.4    6.9   0.1    3.3  3  SAM_Ste50p  Ste50p, sterile alpha motif
        0.2   11.9   1.2       0.56   10.4   1.2    1.7  1  FYVE_2      FYVE-type zinc finger


Domain annotation for each model (and alignments):
>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       1.4   6.2e+03      13      36 ..     206     227 ..     205     231 .. 0.74
   2 !    6.3   0.0     0.003        13       4      33 ..     241     274 ..     241     279 .. 0.81
   3 !    8.1   0.1   0.00084       3.8       1      32 [.     264     299 ..     264     313 .. 0.82
   4 ?    2.6   0.0     0.045     2e+02      20      32 ..     339     352 ..     318     358 .. 0.75
   5 ?    2.8   0.0     0.037   1.7e+02      18      30 ..     363     375 ..     359     380 .. 0.81
   6 ?    2.1   0.0     0.062   2.8e+02      23      38 ..     396     411 ..     386     416 .. 0.66
   7 !    5.6   0.2    0.0051        23       2      32 ..     397     432 ..     396     441 .. 0.70
   8 ?    3.1   0.4     0.031   1.4e+02       2      30 ..     424     459 ..     424     467 .. 0.66
   9 ?    1.6   0.9     0.093   4.2e+02       3      37 ..     454     493 ..     452     498 .. 0.60
  10 ?    3.7   0.5      0.02        92       2      30 ..     480     513 ..     479     521 .. 0.68

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 1.4
                 --E-S-HHH-TT--EEE-.-S--- CS
       LRR_4  13 ltdiplleklpnLkeLdLsgNnli 36 
                 l di+ l+ +++  ++ +s N  +
  EPX70445.1 206 LGDIGQLN-MDKISQI-ISKNRSL 227
                 67888899.9999888.8888444 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.003
                 -EEE--SS.---E-S-HH..H.-TT--EEE-.-S CS
       LRR_4   4 evLdLsnN.qltdiplle..k.lpnLkeLdLsgN 33 
                 ++L L ++ +ltd  ll+  + +p L++L+L+++
  EPX70445.1 241 TELRLYDCsRLTDGALLQiaQyCPRLHTLHLTFC 274
                 6799998889**9777777766*********766 PP

  == domain 3  score: 8.1 bits;  conditional E-value: 0.00084
                 SS--EEE--SS.---E-S-.HH..H-TT--EEE-.- CS
       LRR_4   1 pnLevLdLsnN.qltdipl.le..klpnLkeLdLsg 32 
                 p+L +L+L  + q++d  + l+  kl+ Lk L+++g
  EPX70445.1 264 PRLHTLHLTFCgQMKDEVFnLYseKLTELKDLSING 299
                 7899*****9889**9777844559********976 PP

  == domain 4  score: 2.6 bits;  conditional E-value: 0.045
                 HH.-TT--EEE-.- CS
       LRR_4  20 ek.lpnLkeLdLsg 32 
                    +pnL +L+Ls+
  EPX70445.1 339 VDyCPNLVTLTLSR 352
                 3339*******976 PP

  == domain 5  score: 2.8 bits;  conditional E-value: 0.037
                 -HHH-TT--EEE- CS
       LRR_4  18 lleklpnLkeLdL 30 
                 ll++++nL++L +
  EPX70445.1 363 LLSGCKNLTTLRI 375
                 6778*******98 PP

  == domain 6  score: 2.1 bits;  conditional E-value: 0.062
                 TT--EEE-.-S----- CS
       LRR_4  23 pnLkeLdLsgNnlitd 38 
                   L++L+L g+++++d
  EPX70445.1 396 SGLQTLSLAGCSKLSD 411
                 5688888888877654 PP

  == domain 7  score: 5.6 bits;  conditional E-value: 0.0051
                 S--EEE--SS.---E-S-...HH.H-TT--EEE-.- CS
       LRR_4   2 nLevLdLsnN.qltdipl...le.klpnLkeLdLsg 32 
                  L++L+L+++ +l+d  l   ++  +  L+ LdLsg
  EPX70445.1 397 GLQTLSLAGCsKLSDEVLkqgIGpCCGRLRNLDLSG 432
                 599999999878999777544222355599999987 PP

  == domain 8  score: 3.1 bits;  conditional E-value: 0.031
                 S--EEE--SS---E-S-HH........H.-TT--EEE- CS
       LRR_4   2 nLevLdLsnNqltdiplle........k.lpnLkeLdL 30 
                 +L++LdLs+  l+++   e        +    L++L+L
  EPX70445.1 424 RLRNLDLSG--LSELTDDEaasmfgswNiQSGLETLSL 459
                 599999998..777666322344446675555888888 PP

  == domain 9  score: 1.6 bits;  conditional E-value: 0.093
                 --EEE--SS.---E-S-...HHH.-TT--EEE-.-S---- CS
       LRR_4   3 LevLdLsnN.qltdipl...lek.lpnLkeLdLsgNnlit 37 
                 Le+L+L+ +  l d  l   l +   +L +LdL+g ++it
  EPX70445.1 454 LETLSLRRClGLGDRTLravLVNsGQSLSSLDLNGLSYIT 493
                 7888888753455444433322336779999997755554 PP

  == domain 10  score: 3.7 bits;  conditional E-value: 0.02
                 S--EEE--SS---E-S-.....HH..H-TT--EEE- CS
       LRR_4   2 nLevLdLsnNqltdipl.....le..klpnLkeLdL 30 
                 +L +LdL++  l+ i +     l+   lp L++Ld+
  EPX70445.1 480 SLSSLDLNG--LSYITSdslhyLAkfPLPRLQTLDV 513
                 677888887..6666664544422644999999998 PP

>> zf-MIZ  MIZ/SP-RING zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.9   4.8e-06     0.022      15      48 ..     116     150 ..     107     152 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 4.8e-06
                 EEEETT--SS--.EEHHHHHHHHHHS---B-TTT- CS
      zf-MIZ  15 PvrgekCkHlqC.fdlesylelnertetWnCPvCs 48 
                 + +  +C H qC f ++ y +++e+++ W C  Cs
  EPX70445.1 116 AGKLDFCVHCQCrFTITPYSKYSEKENGWLCYPCS 150
                 667889******99*****************9997 PP

>> SAM_Ste50p  Ste50p, sterile alpha motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0     0.021        93      42      57 ..     241     256 ..     235     262 .. 0.85
   2 ?    6.9   0.1    0.0016       7.4      37      61 ..     394     418 ..     367     420 .. 0.87
   3 ?   -3.5   0.0       2.8   1.3e+04      41      60 ..     454     472 ..     451     474 .. 0.81

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.021
                 HHHHHHHHHHCTTS-H CS
  SAM_Ste50p  42 seltLqDCkeLcdddl 57 
                 +el L DC  L+d+ l
  EPX70445.1 241 TELRLYDCSRLTDGAL 256
                 69***********987 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0016
                 -CCCHHHHHHHHHHHCTTS-HHHHH CS
  SAM_Ste50p  37 tGsvLseltLqDCkeLcdddlkkai 61 
                  Gs L+ l+L+ C  L+d+ lk+ i
  EPX70445.1 394 IGSGLQTLSLAGCSKLSDEVLKQGI 418
                 59*****************999766 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 2.8
                 HHHHHHHHHHHCTTS-HHHH CS
  SAM_Ste50p  41 LseltLqDCkeLcdddlkka 60 
                 L+ l+L  C  L d  l+ a
  EPX70445.1 454 LETLSLRRCLGLGDRTLR-A 472
                 788999999999999887.5 PP

>> FYVE_2  FYVE-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.2   0.00012      0.56      72     102 ..     120     151 ..     109     165 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00012
      FYVE_2  72 rqCldCkln.vCkkCsvenkkekvwlCkiCse 102
                   C+ C+   + +  s++++ke++wlC +Cs+
  EPX70445.1 120 DFCVHCQCRfTITPYSKYSEKENGWLCYPCSR 151
                 579999875155668999************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (560 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       498  (0.0277762); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.32s 00:00:00.92 Elapsed: 00:00:00.50
# Mc/sec: 3344.12
//
Query:       EPX70446.1  [L=267]
Description: hypothetical protein SOCG_04760 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0054   16.4   0.0     0.0096   15.6   0.0    1.4  1  SARAF     SOCE-associated regulatory factor of calcium homoeo


Domain annotation for each model (and alignments):
>> SARAF  SOCE-associated regulatory factor of calcium homoeostasis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   5.4e-07    0.0096     210     264 ..      23      90 ..       2      94 .. 0.68

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 5.4e-07
       SARAF 210 gseeeqddpPppy..............sltksqkpssssessqqgeqeeswrpGFWtGlatGaaaGYla 264
                   +++ d+ Pppy              s+++s ++s++++ s  + ++++ +  FW G+at  ++ Y++
  EPX70446.1  23 ADTHSADGTPPPYsasnkfidlemadgSAQNSAQESANNTMSGPS-EKNKFQCHFWRGIATTQLLLYHF 90 
                 22333489999999********99977545555544444444444.6777789********98888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (267 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1014  (0.0565564); expected 358.6 (0.02)
Passed bias filter:                      556  (0.0310112); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 1786.48
//
Query:       EPX70447.1  [L=143]
Description: hsp16-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.6e-22   77.2   0.8      1e-21   77.0   0.8    1.1  1  HSP20       Hsp20/alpha crystallin family
    2.9e-13   49.2   0.1    6.1e-13   48.1   0.0    1.6  2  ArsA_HSP20  HSP20-like domain found in ArsA
     0.0015   19.5   0.4      0.005   17.8   0.3    1.8  1  CS          CS domain
  ------ inclusion threshold ------
       0.01   16.2   0.0      0.013   15.9   0.0    1.3  1  PIH1_CS     PIH1 CS-like domain
      0.065   13.3   0.2         10    6.3   0.0    2.2  2  FKBP26_C    FKBP26_C-terminal
      0.081   13.2   0.0      0.098   12.9   0.0    1.2  1  Cohesin     Cohesin domain


Domain annotation for each model (and alignments):
>> HSP20  Hsp20/alpha crystallin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.0   0.8   3.4e-25     1e-21       1     101 [.      40     142 ..      40     143 .] 0.92

  Alignments for each domain:
  == domain 1  score: 77.0 bits;  conditional E-value: 3.4e-25
                 E--SSEEEEEEEEE-TT--CCCEEEEEETTEEEEEEE--......---TT----SS---EEEEEE--STTB-TTT-EEEEETTEEEEEEEBSS--..-- CS
       HSP20   1 dikeeeeefevkldvpglkkeelkvkvednrvlvkgehe....eeeedekglikerssrkFsrkftLPenvdadkvkaslkdGvLtvtvpkkepekkkk 95 
                 d++e ++  ev +++pg+kk++++v++++++++++ge      +e ++++  ++er+ ++Fsr++t+P+ vdad+++a++++G+L++ +pk e+   + 
  EPX70447.1  40 DVHEGKDTVEVDVELPGVKKQDVQVHYDEGKLTISGESVnerkSESDKGNQRWSERRFGSFSRTITIPNRVDADRIEAQFNNGILSIVLPKVEES--RY 136
                 67899*******************************98866656666778899**************************************9998..68 PP

                 ------ CS
       HSP20  96 erkiqi 101
                 +r+i+i
  EPX70447.1 137 KRQIAI 142
                 999988 PP

>> ArsA_HSP20  HSP20-like domain found in ArsA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.1   0.0     2e-16   6.1e-13       2      62 ..      46     127 ..      45     128 .. 0.97
   2 ?   -3.4   0.0       2.5   7.3e+03      33      39 ..     135     141 ..     131     141 .. 0.77

  Alignments for each domain:
  == domain 1  score: 48.1 bits;  conditional E-value: 2e-16
  ArsA_HSP20   2 deyvlkldLPfvdkeeidlsrsgdeLtIkig......................nfrRqitLPsvlarkevtsAkfedgvLeIr 62 
                 d ++++++LP+v+k++++++ ++  LtI+ +                      +f+R+it P++++++++  A+f++g L I 
  EPX70447.1  46 DTVEVDVELPGVKKQDVQVHYDEGKLTISGEsvnerksesdkgnqrwserrfgSFSRTITIPNRVDADRI-EAQFNNGILSIV 127
                 7899******************************************************************.**********97 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2.5
  ArsA_HSP20  33 nfrRqit 39 
                 +++Rqi+
  EPX70447.1 135 RYKRQIA 141
                 7999995 PP

>> CS  CS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.3   1.7e-06     0.005       6      76 .]      42     130 ..      37     130 .. 0.82

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 1.7e-06
                 EEETTEEEEEEE-TTCTTTTTCEEEEEETTEEEEEE...TS.CEEEEECE................BSS-BETTTEEEEEETTEEEEEEEB CS
          CS   6 yQtldeVvvtiyvkkvnikkkdvkvefkerslkvki...gk.eklliege................LfgpIdpeesswtieskkveitLkK 76 
                 ++ +d+V+v +++++v  kk+dv+v+  e +l+++    ++ +++ ++g+                  + +d +     + +  + i+L K
  EPX70447.1  42 HEGKDTVEVDVELPGV--KKQDVQVHYDEGKLTISGesvNErKSESDKGNqrwserrfgsfsrtitIPNRVDADRIEAQFNNGILSIVLPK 130
                 67789**********9..*************999987665556666666688888888888888888888888888888888888888876 PP

>> PIH1_CS  PIH1 CS-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.9   0.0   4.5e-06     0.013      32      87 ..      47     121 ..      19     132 .. 0.87

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 4.5e-06
     PIH1_CS  32 elaieielPllksikevklrvgerrlel....................eskk.akyfLslkLpYpvdedkveAkFvk 87 
                 +  +++elP++   ++v+++++e +l +                    e ++  ++  ++++p +vd d++eA+F++
  EPX70447.1  47 TVEVDVELPGV-KKQDVQVHYDEGKLTIsgesvnerksesdkgnqrwsE-RRfGSFSRTITIPNRVDADRIEAQFNN 121
                 56799******.6799999999999999***************999744.336999999****************96 PP

>> FKBP26_C  FKBP26_C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0    0.0083        25      10      32 ..      51      73 ..      44      76 .. 0.86
   2 ?    6.3   0.0    0.0034        10      15      36 ..     109     130 ..     102     142 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0083
                HHH-TT--..--EEEEETTEEEE CS
    FKBP26_C 10 kryiPnidlekfkieiedktvtI 32
                 + +P ++++++++ ++++++tI
  EPX70447.1 51 DVELPGVKKQDVQVHYDEGKLTI 73
                4557*****************99 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0034
                 T--..--EEEEETTEEEEE--T CS
    FKBP26_C  15 nidlekfkieiedktvtIelpe 36 
                 ++d++ ++ ++++++++I lp+
  EPX70447.1 109 RVDADRIEAQFNNGILSIVLPK 130
                 69*******************7 PP

>> Cohesin  Cohesin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   3.3e-05     0.098      14      59 ..      46      84 ..      39     137 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 3.3e-05
                SEEEEEEEEESECTTEEEEEEEEEE.TTTEEEEEEEE-TTS.SSGGH CS
     Cohesin 14 dtvtvpvtvsnvskkvaaaqftikYDpavlevvsvkaGsiv.knssv 59
                dtv+v v++ +v+k    ++++++YD  +l+++    G+ v + +s+
  EPX70447.1 46 DTVEVDVELPGVKK----QDVQVHYDEGKLTIS----GESVnERKSE 84
                89************....***************....5555322222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       398  (0.0221987); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 1023.95
//
Query:       EPX70448.1  [L=117]
Description: hypothetical protein SOCG_04758 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-09   38.5   0.3    1.7e-09   38.3   0.3    1.1  1  GPI-anchored  Ser-Thr-rich glycosyl-phosphatidyl-inositol-anc


Domain annotation for each model (and alignments):
>> GPI-anchored  Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.3   0.3   9.7e-14   1.7e-09       1      91 [.      22     110 ..      22     112 .. 0.92

  Alignments for each domain:
  == domain 1  score: 38.3 bits;  conditional E-value: 9.7e-14
  GPI-anchored   1 tsPssgevvtagkpvtitWkdsgtdpgtvtlvLcagssnnlksvktiasgiknsdgsytwtvpaslesggaYflqivsesne.giynySdrF 91 
                   tsP++ e+++ g+   i+W+ ++td++ v ++L +    +++  k ia +++ sdg yt +  ++ ++gg+Y ++i + + + +iy++S+ F
    EPX70448.1  22 TSPTTFEKWETGEDHRISWNFVDTDKEIVGIYLSNYFR-YPTFSKYIA-TVPVSDGCYTADT-TDWPTGGGYRINIGNPERDeEIYAQSEEF 110
                   79************************************.999999888.899999******9.899***********555555********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       356  (0.0198561); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.41
# Mc/sec: 856.62
//
Query:       EPX70449.1  [L=115]
Description: hypothetical protein SOCG_04757 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-11   44.9   1.0    1.8e-11   44.6   1.0    1.1  1  GPI-anchored  Ser-Thr-rich glycosyl-phosphatidyl-inositol-anc


Domain annotation for each model (and alignments):
>> GPI-anchored  Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.6   1.0     1e-15   1.8e-11       1      93 []      21     110 ..      21     110 .. 0.88

  Alignments for each domain:
  == domain 1  score: 44.6 bits;  conditional E-value: 1e-15
  GPI-anchored   1 tsPssgevvtagkpvtitWkdsgtdpgtvtlvLcagssnnlksvktiasgiknsdgsytwtvpaslesggaYflqivsesne.giynySdrFti 93 
                   tsPs+g+v++  ++ ti+W+ ++tdp+ v ++L ++ s  l++   +a +++  dgsyt +  +s ++g++Yf+++++ ++  +iy+ S+ Ft+
    EPX70449.1  21 TSPSKGDVWPTFENHTIKWDFVDTDPKVVGIYLTNKVS--LNQNRFVA-KVSVPDGSYTDET-NSWPTGEGYFFKLTNPDSVeEIYALSEEFTL 110
                   79************************************..55555555.6666679**9887.7799999*******777777*********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       351  (0.0195772); expected 358.6 (0.02)
Passed bias filter:                      297  (0.0165653); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.27s 00:00:00.64 Elapsed: 00:00:00.42
# Mc/sec: 821.68
//
Query:       EPX70450.1  [L=446]
Description: gamma-tubulin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.7e-68  230.7   0.0    2.8e-68  230.0   0.0    1.4  1  Tubulin          Tubulin/FtsZ family, GTPase domain
    6.3e-45  152.4   0.6    1.7e-44  151.0   0.2    1.8  2  Tubulin_C        Tubulin C-terminal domain
    2.8e-06   27.6   0.0    6.5e-06   26.4   0.0    1.7  1  Misat_Tub_SegII  Misato Segment II tubulin-like domain
  ------ inclusion threshold ------
      0.015   15.0   0.0      0.029   14.0   0.0    1.4  1  Tubulin_3        Tubulin domain


Domain annotation for each model (and alignments):
>> Tubulin  Tubulin/FtsZ family, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  230.0   0.0   6.4e-72   2.8e-68       1     196 [.       4     214 ..       4     215 .. 0.98

  Alignments for each domain:
  == domain 1  score: 230.0 bits;  conditional E-value: 6.4e-72
                 EEEEEEEHHHHHHHHHHHHH...HHHCH..............HHHT.....TTEEEEE....EEESBHHHHHTS-GS........EEEE--CCC..CTT CS
     Tubulin   1 eiivigvGqcGnqignelwellakehgiqsdg..........dslesfFsesgkveyiprsvaidtdpqvlneikags..elfnpnklllgkeg..agn 85 
                 eii+i+ GqcGnqig+++w++l+ ehgi++dg          d++++fF++s++++yipr+++id++p+v+++i  ++  +l+np+++l+ k+g  agn
  EPX70450.1   4 EIITIQAGQCGNQIGSQFWQQLCLEHGISPDGtlenyatdgvDRKDVFFYQSDDNRYIPRALLIDLEPRVVSNILGDTygNLYNPENILVTKNGggAGN 102
                 7****************************9999************************************************************999*** PP

                 C--TT-HHHHHHHHHHTHHHHHHHHTT-SE.SEEEEEEETTSSHHHHHHHHHHHHHHHTSTTSEEEEEEEE--..GG.G-HHHHHHHHHHHHHHHHT-S CS
     Tubulin  86 ngaggypevgkeaaeeileeirkevekcdslqgffitaslgGGTGSGlgpvilevlkeeypkalvvtvvvlPs..efsevvvepynailalkelieesd 182
                 n+a+gy++ ++++ e+i+++i++e++++dsl+gf +++s++GGTGSGlg+++le+l++++pk++v+t++v+P+  + s+vvv+pyn++lalk+l  ++d
  EPX70450.1 103 NWAHGYSY-ADRIFEDIMDMIDREADGSDSLEGFSLLHSIAGGTGSGLGSYLLERLNDRFPKKIVQTYSVFPNnqSVSDVVVQPYNSLLALKRLTLNAD 200
                 *******9.899*************************************************************9999********************** PP

                 EEEEEEHHHHHCCS CS
     Tubulin 183 avividNdaLlkil 196
                 av+v+dN aL +i+
  EPX70450.1 201 AVVVLDNAALAHIA 214
                 **********9986 PP

>> Tubulin_C  Tubulin C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.53   2.4e+03      29      47 ..     220     238 ..     204     249 .. 0.75
   2 !  151.0   0.2   3.8e-48   1.7e-44       1     124 [.     264     391 ..     264     393 .. 0.97

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.53
                 HHHHTCSGGGBSSSTSTTT CS
   Tubulin_C  29 vtrallepknimvkvdprk 47 
                 + +  ++++n++v++ ++ 
  EPX70450.1 220 IQNPTFHQQNQLVSTVMSA 238
                 6667788888888876654 PP

  == domain 2  score: 151.0 bits;  conditional E-value: 3.8e-48
                 TTC-EEEEEEESSSCTT...TTTCS-HHHHHHHHHTCSGGGBSSSTSTTT.SSEEEEEEEEEESSSHHHHHHHHHHHHHTTTS-BSTTSTTTEEEEEEE CS
   Tubulin_C   1 PrlhFlltsyaPlvsae...kaavektsvqdvtrallepknimvkvdprk.gkylaiallirGdvepkevnkavqrikekkkaqfveWiptgikvalnk 95 
                 Pr+hFl tsy+P+++++   +++++kt+v +v+r+ll+pkn mv+v+p+k +++++++++i+G+ +p++v+k++ ri+e+k a+f++W+p++i+val+k
  EPX70450.1 264 PRCHFLSTSYTPFTNQQveeAKTIRKTTVLEVMRRLLQPKNRMVSVNPSKqSCFISLLNIIQGEADPTDVHKSLLRIRERKLATFIPWGPASIQVALSK 362
                 9**************99998899*************************986889999****************************************** PP

                 CECT-TTTSSCEEEEEEEEGGGHHHHHHH CS
   Tubulin_C  96 kspyvkkqskvsvlmlaNttsiaelfkrl 124
                 kspy+k++++vs+lmlaN+tsia+lfkr+
  EPX70450.1 363 KSPYIKTNHRVSGLMLANHTSIASLFKRT 391
                 ***************************97 PP

>> Misat_Tub_SegII  Misato Segment II tubulin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   0.0   1.4e-09   6.5e-06       1      68 [.       3      72 ..       3     103 .. 0.75

  Alignments for each domain:
  == domain 1  score: 26.4 bits;  conditional E-value: 1.4e-09
  Misat_Tub_SegII  1 rEivtlqlGnyaNyvgtHfWNtQ..esyftydeeeee...sevdhdvlfregetkqgqvtytPRllivDlkgs 68
                     rEi+t+q G+  N +g++fW +   e+ ++ d + e+   + vd++  f+    ++ +  y+PR+l++Dl+  
       EPX70450.1  3 REIITIQAGQCGNQIGSQFWQQLclEHGISPDGTLENyatDGVDRKDVFFY---QSDDNRYIPRALLIDLEPR 72
                     8*******************7642266665555444456677765555554...577899*********9865 PP

>> Tubulin_3  Tubulin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   6.5e-06     0.029      57     152 ..     119     205 ..     100     246 .. 0.58

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 6.5e-06
   Tubulin_3  57 hdlldrdlrpfaeecdqlrglqvftgvddaWG.GfaakylerlrdeygkksilvWvlaleeklkkkkkaklerklkklnkarslkelseqaslyvPi 152
                  d++dr+    a+ +d+l+g+ ++ ++    G G ++  lerl d ++kk + ++ +  ++++ ++        ++  n+  +lk+l+ +a ++v +
  EPX70450.1 119 MDMIDRE----ADGSDSLEGFSLLHSIAGGTGsGLGSYLLERLNDRFPKKIVQTYSVFPNNQSVSDVV------VQPYNSLLALKRLTLNADAVVVL 205
                 5777776....6889***********99887768999999**********998887654444433333......33334444444444433333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (446 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       498  (0.0277762); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 3136.00
//
Query:       EPX70451.1  [L=217]
Description: complexed with Cdc5 protein Cwf12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-55  188.7   9.0    1.5e-54  185.3   9.0    1.9  1  Isy1      Isy1-like splicing family
     0.0022   18.0   2.6      0.025   14.6   0.1    2.4  2  YolD      YolD-like protein
  ------ inclusion threshold ------
       0.12   11.5   0.0       0.15   11.1   0.0    1.1  1  DUF1005   Protein of unknown function (DUF1005)
       0.16   11.3   3.8        0.1   12.0   0.7    1.9  2  GAS       Growth-arrest specific micro-tubule binding


Domain annotation for each model (and alignments):
>> Isy1  Isy1-like splicing family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  185.3   9.0   3.3e-58   1.5e-54      28     255 .]      12     215 ..       3     215 .. 0.83

  Alignments for each domain:
  == domain 1  score: 185.3 bits;  conditional E-value: 3.3e-58
        Isy1  28 kkrrRPklasevkslkeaekwrrqvirEIsrkvakIqdaglgeyqiRdlNDeiNkLlrekrhWekrIkeLgGpdykrkapkmldeegkevpgkkgyrYF 126
                 + ++RP+++++++s++ +ek r++v+++ srk++kIq a+l +yqiRdlND iN+L+rek++We++I++LgG +y  +++k++ ++g+++ + ++yrY+
  EPX70451.1  12 HVEKRPRNIKSINSVATCEKHRQSVVKDLSRKITKIQSAQLPDYQIRDLNDAINQLMREKHAWEVQIHDLGGINYLYSKAKLFADDGEKIGEVDDYRYY 110
                 3349**************************************************************************************888****** PP

        Isy1 127 GrAkeLPgVkelfekekkkeekkkkerael.fknidadYYGyrd.eedgvlleleaeaekeareeavwkeekeeeeeeeekekeeeeeeeeeeeeseee 223
                 GrA+eLPgVkelfe++ +    ++ +++e+ ++++da YYGy   ee+  l+++e+e +++  ++  +              ++ ++ e+++       
  EPX70451.1 111 GRARELPGVKELFEADMTF-VPERLRKQEMqQRQLDAWYYGYTPlEEESSLQDYEKELSNQRLDRISK--------------ERPNSLENWKP------ 188
                 ****************944.44444555552667********65155569999999998887766651..............11111222222...... PP

        Isy1 224 kkefvalhvpvpsqeeiekallekkKkeLlek 255
                     +   ++vps+ee+ek+lle++K++Ll++
  EPX70451.1 189 ----IL-IEHVPSREEVEKILLERRKNALLHR 215
                 ....22.456*******************975 PP

>> YolD  YolD-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.1   5.6e-06     0.025       9      57 ..      37      85 ..      31      98 .. 0.90
   2 ?    3.1   0.3     0.022        98      17      50 ..     160     193 ..     152     204 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 5.6e-06
        YolD  9 lrelkeeqkkvekpeLDeqqleeineklqealeeeqpvtityyedgele 57
                +++l ++ +k++  +L + q++++n ++++ ++e+++ ++++++ g + 
  EPX70451.1 37 VKDLSRKITKIQSAQLPDYQIRDLNDAINQLMREKHAWEVQIHDLGGIN 85
                578999*************************************998876 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.022
        YolD  17 kkvekpeLDeqqleeineklqealeeeqpvtity 50 
                  + + +eL++q l++i++    +le+ +p+ i++
  EPX70451.1 160 LQDYEKELSNQRLDRISKERPNSLENWKPILIEH 193
                 344589************9999999999999887 PP

>> DUF1005  Protein of unknown function (DUF1005)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   3.4e-05      0.15     194     249 ..      26      83 ..      19      88 .. 0.63

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 3.4e-05
     DUF1005 194 vFtCkFslrns.gdlrsrsvqset.stsrsllsslgsekekeskeRkgWsvtihDLsG 249
                 v tC   +++   dl+++ ++ ++ +   + +  l+   ++ ++e+ +W+v+ihDL G
  EPX70451.1  26 VATCEKHRQSVvKDLSRKITKIQSaQLPDYQIRDLNDAINQLMREKHAWEVQIHDLGG 83 
                 556644444330343333222222022356666778888999**************99 PP

>> GAS  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1      0.11   4.9e+02     170     193 ..      48      71 ..      15      81 .. 0.59
   2 ?   12.0   0.7   2.2e-05       0.1      76     157 ..     133     215 ..     123     216 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.11
         GAS 170 aaanldpaalsavsekleevlesK 193
                 ++a+l + ++  ++  +++++++K
  EPX70451.1  48 QSAQLPDYQIRDLNDAINQLMREK 71 
                 234444455555555555555555 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 2.2e-05
         GAS  76 qlknyekdkqslknlkarlkelekelkdlkwehevleqrfekvekerdelykkfe.aaiqevqqktglknllLekklkalqee 157
                 +l+++e ++ +l++    ++ le+e +   +e+e  +qr+++++ker +  ++ +   i++v  + +++++lLe++ +al ++
  EPX70451.1 133 RLRKQEMQQRQLDAWYYGYTPLEEESSLQDYEKELSNQRLDRISKERPNSLENWKpILIEHVPSREEVEKILLERRKNALLHR 215
                 678888888889999999999**************************765555551669*****************9988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       815  (0.0454571); expected 358.6 (0.02)
Passed bias filter:                      473  (0.0263818); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 1525.30
//
Query:       EPX70452.1  [L=342]
Description: P-TEFB associated cyclin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.8e-14   51.2   0.3    2.5e-13   49.9   0.3    1.7  1  Cyclin_N  Cyclin, N-terminal domain
     0.0004   20.5   0.2       0.01   15.9   0.1    2.6  2  Cyclin_C  Cyclin, C-terminal domain
     0.0088   15.0   4.6      0.013   14.5   4.6    1.1  1  CENP-T_N  Centromere kinetochore component CENP-T N-terminus
  ------ inclusion threshold ------
      0.034   14.2   0.0      0.081   13.0   0.0    1.7  1  TFIIB     Transcription factor TFIIB repeat


Domain annotation for each model (and alignments):
>> Cyclin_N  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.9   0.3   5.6e-17   2.5e-13      24     125 ..      36     154 ..      15     156 .. 0.81

  Alignments for each domain:
  == domain 1  score: 49.9 bits;  conditional E-value: 5.6e-17
                 SSS-H.HHHHHHHHHHHHHHHHTT--TTHHHHHHHHHHHHHHHS---CCCHHHHHHHHHHHHHHHHSSS---HHHHHHHT................TT. CS
    Cyclin_N  24 pelnp.emRailidwlvevaekfkltpetlflavnyldRflskksvpkdklqlvgatcLllAaKveeisppkledlvyit................de. 104
                 p +++   R+  ++++++v  ++k  + tl++a  y++Rf+ + s++ ++   ++atc++lA+Kve+    kl+d+++ +                +e 
  EPX70452.1  36 PLVQEeIQRSKGCNFIINVGLRLKSPQITLATANAYFHRFYLRFSLKDYHYYDIAATCIFLASKVEDS-NRKLRDIIINCakvaqknnnilideqtKEy 133
                 44444467999******************************************************777.7**********8888888888886655333 PP

                 SS-HHHHHHHHHHHHHHTTT- CS
    Cyclin_N 105 afteeeilemErliLetLnfd 125
                    ++ il  E+ +Le+L+fd
  EPX70452.1 134 WRWRDVILYTEEILLEALCFD 154
                 334677788888888888887 PP

>> Cyclin_C  Cyclin, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0      0.07   3.1e+02      42      58 ..      84     100 ..      71     122 .. 0.79
   2 !   15.9   0.1   2.2e-06      0.01       7      91 ..     164     253 ..     151     280 .. 0.69

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.07
                 S-HHHHHHHHHHHCCHH CS
    Cyclin_C  42 yppSliAaaalllarst 58 
                 y +  iAa++++la+++
  EPX70452.1  84 YHYYDIAATCIFLASKV 100
                 666679********998 PP

  == domain 2  score: 15.9 bits;  conditional E-value: 2.2e-06
                 HHHHHCCSSHT.-HCCHHCHHCHHHHHHCSCCHCCS-HHHHHHHHHHHCCHHH..HS--..S-HHHHHHC.---HHHHHHHHHHHHHHH.H CS
    Cyclin_C   7 lrrflkaadasedselrtlakylleltlldydflsyppSliAaaalllarstl..nspe..wtetlehyt.gyskedlkpcvelilell.s 91 
                 l r+++   ase+++l+++a + +  ++  +++l +p  +iAaaa+ + +     + p   +   l  +   +s +d+ +++ li++l+ +
  EPX70452.1 164 LMRLIQKY-ASENKNLTKVAWTYINDSTRSISCLLFPSKVIAAAAFQHGLEKTktSLPLdnAGIPLWLIDiDVSMDDIHAVMDLIHSLYrH 253
                 55665552.34466999*****************************999988643222222222222222245888888888888888842 PP

>> CENP-T_N  Centromere kinetochore component CENP-T N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   4.6   2.8e-06     0.013     216     358 ..     201     337 ..     199     341 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 2.8e-06
    CENP-T_N 216 ravdvgaflqdLrdtslalalPGdsartpvaalvadvvLeDtqpFsqplvgkspsvhhSlpspshtgaedaeravgrrtqssgsrlqnnspekpaevda 314
                 + +  +af  +L++t  +  lP d+a  p   +  dv ++D    +  +    ++++   p ++h++++   + +++ t  + s+  +++p+k  ++ a
  EPX70452.1 201 KVIAAAAFQHGLEKTKTS--LPLDNAGIPLWLIDIDVSMDDIHAVMDLIHSLYRHINSGKPFVAHSETRPDSHSTTPSTVATNSA--QSTPQK--QFGA 293
                 668899*********987..999**************************99999************9987777777666654433..445555..8899 PP

    CENP-T_N 315 lalsfseaepeghtevteaegsqeavEakepegssededtsere 358
                 ++lsf + +  + + +++++ sq++  ++e+ +++ d++++++e
  EPX70452.1 294 TSLSFETGSNVATSRAESSTTSQGEQSEQEQIATQTDKSKESQE 337
                 99999888888877888888888877777777777666655443 PP

>> TFIIB  Transcription factor TFIIB repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   1.8e-05     0.081      38      68 ..      88     119 ..      60     121 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.8e-05
                 HHHTTHHHHHHTTTTSS--HHHHH.HHSS--S CS
       TFIIB  38 giaAAclyiAcrkeevkrtqkeis.svlqVse 68 
                  iaA+c+++A++ e  +r +++i  + ++V++
  EPX70452.1  88 DIAATCIFLASKVEDSNRKLRDIIiNCAKVAQ 119
                 59********************8426666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1226  (0.0683808); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.27s 00:00:00.85 Elapsed: 00:00:00.47
# Mc/sec: 2166.10
//
Query:       EPX70453.1  [L=338]
Description: ubiquitin-protein ligase E3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.5e-07   29.0   7.7    1.9e-06   27.9   7.7    1.6  1  RINGv         RING-variant domain
    0.00058   20.1   6.9    0.00058   20.1   6.9    1.7  2  zf-RING_2     Ring finger domain
  ------ inclusion threshold ------
      0.049   13.4   9.2       0.12   12.2   8.3    2.1  2  zf-RING_4     RING/Ubox like zinc-binding domain
      0.053   13.8   0.1       0.11   12.8   0.1    1.5  1  Dpoe2NT       DNA polymerases epsilon N terminal
      0.089   12.8   2.9        0.4   10.7   3.0    2.0  2  zf-RING_UBOX  RING-type zinc-finger
       0.13   12.4   3.5       0.58   10.3   3.0    2.0  2  zf-UDP        Zinc-binding RING-finger
       0.34   10.8   6.6       0.84    9.6   6.6    1.7  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
        1.1    9.6  10.4      0.056   13.8   4.3    2.0  2  zf-RING-like  RING-like domain
        3.7    7.5   9.8       0.61   10.0   5.2    2.1  2  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)


Domain annotation for each model (and alignments):
>> RINGv  RING-variant domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   7.7   9.4e-10   1.9e-06       1      48 []      14      61 ..      14      61 .. 0.94

  Alignments for each domain:
  == domain 1  score: 27.9 bits;  conditional E-value: 9.4e-10
                ETTTTEE-SSSS....--B-SS--STCCCSB-HHHHHHHHHHTCT-SB-TTT CS
       RINGv  1 CriCleeeeese....plispCkCrGslklvHesClekWldekeantqCeiC 48
                C+iC++e + s+    p+ +pCkC+    l+He+Cl   +++ ++n++C +C
  EPX70453.1 14 CWICYDEFDGSNsaknPWRRPCKCSL---LAHENCLIAYVTS-SSNNRCPQC 61
                *****99888777889********98...9************.********* PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   6.9   2.9e-07   0.00058       2      43 ..      13      61 ..      12      62 .. 0.72
   2 ?   -4.0   0.3         9   1.8e+04      28      32 ..     173     177 ..     167     182 .. 0.46

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 2.9e-07
   zf-RING_2  2 eCpICleelssadsvl...llp..CgHvfhreClerwlrssst..CPlC 43
                 C IC++e++ ++s+    + p  C+   h++Cl  +++sss+  CP C
  EPX70453.1 13 RCWICYDEFDGSNSAKnpwRRPckCSLLAHENCLIAYVTSSSNnrCPQC 61
                6********77666443333351155558*******987777778**** PP

  == domain 2  score: -4.0 bits;  conditional E-value: 9
   zf-RING_2  28 eCler 32 
                  C+++
  EPX70453.1 173 YCVDH 177
                 24433 PP

>> zf-RING_4  RING/Ubox like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.4      0.21   4.3e+02      21      32 ..      10      21 ..       4      30 .. 0.71
   2 ?   12.2   8.3   5.9e-05      0.12       1      48 []      14      66 ..      14      66 .. 0.74

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.21
   zf-RING_4 21 gyqiClfCyhri 32
                ++  C+ Cy++ 
  EPX70453.1 10 NFSRCWICYDEF 21
                577788888765 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 5.9e-05
   zf-RING_4  1 cplCdeeldetdkd....lkpCeCgyqiClfCyhrile.eeegrCPaCreeYk 48
                c +C +e+d ++++     +pC+C       C+   ++ ++++rCP+C +eYk
  EPX70453.1 14 CWICYDEFDGSNSAknpwRRPCKCSLLAHENCLIAYVTsSSNNRCPQCLNEYK 66
                778999997777662222479***988888887765553689*********97 PP

>> Dpoe2NT  DNA polymerases epsilon N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   5.7e-05      0.11      20      59 ..     194     237 ..     184     243 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 5.7e-05
     Dpoe2NT  20 lrseaskylaevllsl....deeeledwlekiieavekQpLssn 59 
                 + +e   yl + +l+     de+   dwl ki +++e Q+L +n
  EPX70453.1 194 IHQELRSYLKKKFLPSqqedDEQSKRDWLRKIDDQIENQNLVTN 237
                 677888899999988722224556679**************987 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   3.0    0.0002       0.4       1      36 [.      14      59 ..      14      62 .. 0.72
   2 ?    0.2   0.2      0.39   7.9e+02       1       9 [.      58      66 ..      58      73 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.0002
  zf-RING_UBOX  1 CpIClelft......dP.lvl.pCGHtFCreCl.w.elskslegaf 36
                  C IC+++f+      +P   + +C+   +++Cl    +s+s+++  
    EPX70453.1 14 CWICYDEFDgsnsakNPwRRPcKCSLLAHENCLiAyVTSSSNNRCP 59
                  99*************77433335999999****5234555555544 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.39
  zf-RING_UBOX  1 CpIClelft 9 
                  Cp Cl++++
    EPX70453.1 58 CPQCLNEYK 66
                  999999996 PP

>> zf-UDP  Zinc-binding RING-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   3.0   0.00029      0.58       7      62 ..      10      67 ..       5      73 .. 0.85
   2 ?   -0.5   0.0       0.7   1.4e+03      35      55 ..     102     122 ..      94     126 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00029
      zf-UDP  7 ngqiCqiCgddvg.ltedgelFvacnecafpvcrpcy.eyerkdgnqsCPqCktrykr 62
                n   C iC d+ +  ++ ++++    +c+ +   +c+  y  +  n+ CPqC  +yk 
  EPX70453.1 10 NFSRCWICYDEFDgSNSAKNPWRRPCKCSLLAHENCLiAYVTSSSNNRCPQCLNEYKI 67
                5667*******963788899**99999****9999964899***********999985 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.7
      zf-UDP  35 fpvcrpcyeyerkdgnqsCPq 55 
                 f + + +y+  rk g  +C q
  EPX70453.1 102 FGLAKFVYSILRKTGFWACRQ 122
                 667788999999999888876 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   6.6   0.00042      0.84       1      41 []      14      61 ..      14      61 .. 0.95

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00042
                -TTT-S--SS-E........E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4  1 CpiCleeakepn.......elleCkHsfCskCirkilksrkkvkCPlC 41
                C iC +e+   n       ++ +C    +++C+  ++ s++++ CP+C
  EPX70453.1 14 CWICYDEFDGSNsaknpwrRPCKCSLLAHENCLIAYVTSSSNNRCPQC 61
                99*******99999***9999999999***********999999**** PP

>> zf-RING-like  RING-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   4.3   2.8e-05     0.056      18      43 .]      36      61 ..      33      61 .. 0.92
   2 ?   -2.7   0.3       3.9   7.7e+03      26      33 ..     173     180 ..     167     182 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 2.8e-05
  zf-RING-like 18 sCnvrlHvdCfqhyirthsskkCpkC 43
                  +C+   H++C+ +y+ ++s+++Cp+C
    EPX70453.1 36 KCSLLAHENCLIAYVTSSSNNRCPQC 61
                  49999**********99999****** PP

  == domain 2  score: -2.7 bits;  conditional E-value: 3.9
  zf-RING-like  26 dCfqhyir 33 
                   +C++h+  
    EPX70453.1 173 YCVDHFST 180
                   68888775 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   5.2   0.00031      0.61       1      40 []      13      61 ..      13      61 .. 0.70
   2 ?   -2.6   0.1       2.6   5.1e+03       5      14 ..     174     183 ..     168     185 .. 0.68

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00031
  zf-C3HC4_2  1 kCpiCldmlkdpsvvt.......pCgHvfCqkCilrsLeekn..eCPlC 40
                +C iC+d++      +       +C    +++C+  + ++++  +CP+C
  EPX70453.1 13 RCWICYDEFDGSNSAKnpwrrpcKCSLLAHENCLIAYVTSSSnnRCPQC 61
                59******985544447777745566668999*99965543336***** PP

  == domain 2  score: -2.6 bits;  conditional E-value: 2.6
  zf-C3HC4_2   5 Cldmlkdpsv 14 
                 C+d ++++ +
  EPX70453.1 174 CVDHFSTTQM 183
                 9999988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1026  (0.0572257); expected 358.6 (0.02)
Passed bias filter:                      645  (0.0359752); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 2378.67
//
Query:       EPX70454.1  [L=273]
Description: DASH complex subunit Duo1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.3e-22   78.5   3.7    3.9e-22   77.8   3.7    1.4  1  DASH_Duo1  DASH complex subunit Duo1
  ------ inclusion threshold ------
      0.066   12.9   0.1      0.066   12.9   0.1    1.9  2  RPW8       Arabidopsis broad-spectrum mildew resistance prote
       0.68   10.4  12.9          2    8.9  12.9    1.8  1  DASH_Dad2  DASH complex subunit Dad2
       0.78    8.5   7.5       0.98    8.2   7.5    1.1  1  ALMT       Aluminium activated malate transporter


Domain annotation for each model (and alignments):
>> DASH_Duo1  DASH complex subunit Duo1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.8   3.7   8.7e-26   3.9e-22       2      73 ..       5      76 ..       4      77 .. 0.98

  Alignments for each domain:
  == domain 1  score: 77.8 bits;  conditional E-value: 8.7e-26
   DASH_Duo1  2 LekEleqLrkinevienviesLkkaksniervketvestntLLdkWirIlsqtehtqrllldpeWkgasade 73
                L++El+ L+++nevie++++sL+ +++++++++++++s+n+L++ W++++sqt+htq+lll+++Wkg ++d+
  EPX70454.1  5 LRQELQLLKTFNEVIEKLTGSLRVSSEKLHSFEKSIQSANQLVNVWSSVQSQTDHTQQLLLNTDWKGPMQDL 76
                9*********************************************************************97 PP

>> RPW8  Arabidopsis broad-spectrum mildew resistance protein RPW8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   1.5e-05     0.066      36      87 ..       4      55 ..       1      67 [. 0.91
   2 ?   -1.7   0.7      0.46   2.1e+03      48      67 ..      76      95 ..      72     106 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.5e-05
        RPW8 36 rLestleritPvvkeieklnkeldrpreeieeLkklLekaekLVekcsklkr 87
                +L + l+ ++++ + iekl+  l    e++++++k +++a++LV+  s +++
  EPX70454.1  4 DLRQELQLLKTFNEVIEKLTGSLRVSSEKLHSFEKSIQSANQLVNVWSSVQS 55
                68899999***************9999******************9999985 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.46
        RPW8 48 vkeieklnkeldrpreeiee 67
                ++eie+l+k+  ++++e+e+
  EPX70454.1 76 LEEIETLQKQKIQQDQELEK 95
                57888898888666666665 PP

>> DASH_Dad2  DASH complex subunit Dad2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9  12.9   0.00045         2       8      73 ..       6      94 ..       4     125 .. 0.73

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00045
   DASH_Dad2  8 raELeaLkqlrdlsdslakqleeLeeklstladgteavasVlanWqnvlraismaslkllqkaee.......................e 73
                r+EL+ Lk ++++ ++l+  l+  +ekl+  ++  ++ ++ ++ W +v       +  ll++  +                       e
  EPX70454.1  6 RQELQLLKTFNEVIEKLTGSLRVSSEKLHSFEKSIQSANQLVNVWSSVQSQTDHTQQLLLNTDWKgpmqdleeietlqkqkiqqdqelE 94
                89***********************************************7777777777644444666666666555433322222221 PP

>> ALMT  Aluminium activated malate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   7.5   0.00022      0.98     304     409 ..      20     128 ..       3     168 .. 0.54

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00022
        ALMT 304 lesakvlrelaesvkkmkklskveellkevkvaaeeLqskldskskLlvnsekweaakkkekaeeveekkeeekeseskkeea.....eaveeaesese 397
                  +    lr  +e+++  +k+ +   + +++     ++qs+ d+ ++Ll+n++ +  +++ e++e+ +++k +++++ +k+++      ++ ee++ +++
  EPX70454.1  20 EKLTGSLRVSSEKLHSFEKSIQ---SANQLVNVWSSVQSQTDHTQQLLLNTDWKGPMQDLEEIETLQKQKIQQDQELEKQQQIqlhrqRQAEEQARREK 115
                 3334444555555555555444...3444555567889999999*******976666666666666666655555544444444554422222222222 PP

        ALMT 398 ksll.keskrslk 409
                 +++l  ++krs+ 
  EPX70454.1 116 EEALlAQKKRSSV 128
                 2222022222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (273 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2390  (0.133304); expected 358.6 (0.02)
Passed bias filter:                      568  (0.0316805); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 2041.76
//
Query:       EPX70455.1  [L=222]
Description: CDK inhibitor Rum1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       212  (0.0118244); expected 358.6 (0.02)
Passed bias filter:                      155  (0.00864521); expected 358.6 (0.02)
Passed Vit filter:                         8  (0.000446204); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1749.81
//
Query:       EPX70456.1  [L=554]
Description: phosphoglucomutase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.5e-35  121.9   0.1    2.7e-35  121.1   0.1    1.4  1  PGM_PMM_I    Phosphoglucomutase/phosphomannomutase, alpha/bet
    1.4e-21   76.9   0.0    2.3e-21   76.1   0.0    1.4  1  PGM_PMM_III  Phosphoglucomutase/phosphomannomutase, alpha/bet
    2.5e-15   56.9   0.0    6.2e-15   55.7   0.0    1.6  1  PGM_PMM_II   Phosphoglucomutase/phosphomannomutase, alpha/bet
    5.9e-08   32.8   0.0    1.6e-07   31.4   0.0    1.7  1  PGM_PMM_IV   Phosphoglucomutase/phosphomannomutase, C-termina
  ------ inclusion threshold ------
       0.13   12.8   0.0       0.27   11.8   0.0    1.4  1  DUF4810      Domain of unknown function (DUF4810)
        0.2   12.1   0.0       0.53   10.7   0.0    1.6  1  IL32         Interleukin 32


Domain annotation for each model (and alignments):
>> PGM_PMM_I  Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.1   0.1   9.1e-39   2.7e-35       2     137 ..      13     153 ..      12     154 .. 0.97

  Alignments for each domain:
  == domain 1  score: 121.1 bits;  conditional E-value: 9.1e-39
                 GGBBTTCEEEECCHCTBSCCHHHHHHHHHHHHCHHCSTS-EEEEEE-S-TTHHHHHHHHHHHHHCCT-CEEEEE...EB-HHHHHHHHHHCCECEEEEE CS
   PGM_PMM_I   2 qkfgtsGlRgkvgegeltpelveklgqaiaeylkaeakkkkvvvGrDtRvssrelaealaaglaanGvevillg...llptPavsfairklkadagimi 97 
                 q +gtsGlR+kv +++ +p ++e+++qa +++++ ++k++k+v+G+D+R+ ++ +++ +++++a nGve++++g   +l+tPa+s+ irk+k+ +gi++
  EPX70456.1  13 QRPGTSGLRKKVTVFQ-QPGYLENFVQATMDVVEPSSKGAKLVLGGDGRYLNDHAIQVICSIAAGNGVEKLVIGvngYLSTPAASHVIRKYKLHGGIIL 110
                 679**********997.********************************************************************************** PP

                 --TTS-TTCCC...EEEEETTTCE--CHHHHHHHHHHCCT-EE CS
   PGM_PMM_I  98 taSHnppeyng...iKvylsnGgpispeveekIeaiiekeeea 137
                 taSHn +++n+   iK++lsnG+p+++ v+ek+ ai+++++e+
  EPX70456.1 111 TASHNAGGPNNdfgIKYNLSNGAPAPEGVTEKMFAITKNISEY 153
                 ******99999999************************99987 PP

>> PGM_PMM_III  Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.1   0.0   7.7e-25   2.3e-21       2     111 ..     296     412 ..     295     415 .. 0.82

  Alignments for each domain:
  == domain 1  score: 76.1 bits;  conditional E-value: 7.7e-25
                  HHHHHHHHHHHHHCH.CSTTTC.EEEEETTS-THHHHHHHHTT-EEEEESSSCHHHHHHHHHTTECEEEETT.CEEEETTTBSS--HHHHHHHHHHHH CS
  PGM_PMM_III   2 gdqllallakyllee.klkpga.gvvktvmtslalervakklgiklvetkvGdkyvleemkeegavlGgEeS.ghiifldeattkDGilaallvleil 96 
                  +d++++++ ++ l     ++g  g +++++ts a++ v k +g +++e+++G+k++++++++++++++gEeS g+++ + +  +kDG++ +l +l+il
   EPX70456.1 296 SDSVAVIAHHADLIPyFREGGIhGYARSMPTSGAIDLVGKYKGKEVYEVPTGWKFFCNLFDAKRLSVCGEESfGTGSDHIR--EKDGMWGILSWLNIL 391
                  6777777776555546444455589****************************************************9977..8************** PP

                  H......HHTS-HHHHHHHHH CS
  PGM_PMM_III  97 a......etgkslselleell 111
                  a       + k++++++++++
   EPX70456.1 392 AalnaqnPKIKTIKDVMKDFY 412
                  *77653322377777777766 PP

>> PGM_PMM_II  Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.7   0.0   2.1e-18   6.2e-15       2      99 ..     184     287 ..     183     290 .. 0.93

  Alignments for each domain:
  == domain 1  score: 55.7 bits;  conditional E-value: 2.1e-18
                 HHHHHGGGTS-....HHHHHHH.T-EEEEE-TT-TTHHHHHHHHHH.TT-.EEEES-----TT-TTSS----TT-TTTTHHHHGGGGG-SEEEEE-TTS CS
  PGM_PMM_II   2 aYiealkekvd....seaikks.glkvvidplhGaggeilkellke.lgv.dvvelnaepdpdfptkapnpeekealkllielvkkegadlglafDgDa 93 
                 +Y+e +k+++d    ++ i+k+ ++++v+d+lhG++g +   ++++ lg+ +  + n++p +df++++p+p+   + k+l+e vk+e+  +g+a DgD+
  EPX70456.1 184 DYVEFMKQIFDfdliRKFISKNpDFTFVFDALHGVTGPYGLAIFHKeLGLpESSCDNCQPLKDFGGGHPDPNL-TYAKSLVERVKREKIVFGAASDGDG 281
                 7**********9999788877779*******************987699988888******************.************************* PP

                 -BEEEE CS
  PGM_PMM_II  94 DRlgvv 99 
                 DR ++ 
  EPX70456.1 282 DRNMIY 287
                 **9985 PP

>> PGM_PMM_IV  Phosphoglucomutase/phosphomannomutase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4   0.0   5.2e-11   1.6e-07      23      72 ..     455     529 ..     428     535 .. 0.79

  Alignments for each domain:
  == domain 1  score: 31.4 bits;  conditional E-value: 5.2e-11
                 H.....................HCCCCCCCCGCCEEEE.EEEETTCCE...EEEEEEES.SHHHHHHHHHHHHHH CS
  PGM_PMM_IV  23 a.....................sikeglkilledGrrlavRpSGTepl...lrvyvEak.sdeelarlaeevael 72 
                 a                     s+ +gl  ++e+G+r++ R SGT++    lr+y+E + sd+   +l+ +va +
  EPX70456.1 455 ApgfvianagdfayrdvvdgsvSEHQGLYAKFENGSRIVTRLSGTGSSgatLRLYIEKHeSDASKYELDTQVALK 529
                 1444444666666777777777899*************************************9999999999876 PP

>> DUF4810  Domain of unknown function (DUF4810)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0     9e-05      0.27      12      51 ..     423     463 ..     412     475 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 9e-05
     DUF4810  12 YeyykedeeskekqieklekiiekaeakgkkvpPGly.Ael 51 
                 Y+y + d+e  +k i+k+++ +e  +a gk+v+PG+  A+ 
  EPX70456.1 423 YDYEELDSEGASKVIQKFRSLVEAKDAVGKQVAPGFViANA 463
                 67776699***************************742555 PP

>> IL32  Interleukin 32
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00018      0.53      56      97 ..     381     420 ..     375     423 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00018
        IL32  56 lrdvlaWlkekaaacleAlvsavkavwkvledFcsslaqllr 97 
                 ++ +l Wl+  aa  l+A    +k++ +v++dF+s  ++ + 
  EPX70456.1 381 MWGILSWLNILAA--LNAQNPKIKTIKDVMKDFYSIYGRTFF 420
                 799*****98876..*********************999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (554 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       333  (0.0185733); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.55u 0.23s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 4029.50
//
Query:       EPX70457.1  [L=164]
Description: membrane protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      3e-34  117.7  15.8    3.6e-34  117.5  15.8    1.1  1  Cg6151-P         Uncharacterized conserved protein CG6151-P
  ------ inclusion threshold ------
       0.39    8.9  11.2       0.46    8.6  11.2    1.0  1  Dpy19            Q-cell neuroblast polarisation
        4.7    7.6   6.9        2.9    8.2   0.6    2.3  2  DUF3040          Protein of unknown function (DUF3040)
          5    6.5   9.3        6.3    6.1   9.3    1.2  1  DUF373           Domain of unknown function (DUF373)
        5.9    7.5   9.6       0.82   10.3   3.7    2.2  3  DUF5592          Family of unknown function (DUF5592)
        6.7    6.2  10.9    1.4e+02    1.9   0.1    2.5  2  Cytochrom_B558a  Cytochrome Cytochrome b558 alpha-subunit


Domain annotation for each model (and alignments):
>> Cg6151-P  Uncharacterized conserved protein CG6151-P
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.5  15.8   1.2e-37   3.6e-34       1     113 []      30     141 ..      30     141 .. 0.99

  Alignments for each domain:
  == domain 1  score: 117.5 bits;  conditional E-value: 1.2e-37
    Cg6151-P   1 lGilsiilcialGianiftlsvvlivfsilalvsgfvvlfiEvPlllricptsskfdefiekfetnwmraalYlvmavvqwlslivqatslivaavlll 99 
                 lGilsi+lci+lGi+n+f++++v ++fs+l++v+g++++fiE P+l ricp+s+kf++f+++f++n++r+++Y+++avv++l +i++ tsli+a v+l 
  EPX70457.1  30 LGILSIFLCIILGIVNLFHITLV-VLFSALTIVEGVLLVFIELPFLARICPVSQKFQTFTNTFASNYYRGLIYAIFAVVTFLGCIFSVTSLIAAGVVLG 127
                 69******************888.*************************************************************************** PP

    Cg6151-P 100 ltgvlYglaalkkq 113
                 ltg++Y++a++k+q
  EPX70457.1 128 LTGICYTFAGIKGQ 141
                 ************98 PP

>> Dpy19  Q-cell neuroblast polarisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6  11.2   0.00016      0.46     210     310 ..      18     117 ..       4     139 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00016
       Dpy19 210 lltWqFsqFvlltqilslfaldllglipteklalillihllslllafvlqfgnsmlllslllsvllslllilvlqrkvkskrlllklillllklllsia 308
                 l +W Fs ++  + ils+f++ +lg+++   ++l++l+ +l ++  ++l f    +l+ +++++  + ++++ + +++ ++  ++ ++ +++ l  ++ 
  EPX70457.1  18 LKSWNFSIYAQWLGILSIFLCIILGIVNLFHITLVVLFSALTIVEGVLLVFIELPFLARICPVSQKFQTFTNTFASNYYRGL-IYAIFAVVTFLGCIFS 115
                 569************************************************************9999999999977777665.3444443333222222 PP

       Dpy19 309 lt 310
                 +t
  EPX70457.1 116 VT 117
                 22 PP

>> DUF3040  Protein of unknown function (DUF3040)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.9     0.054   1.6e+02      48      79 ..      28      61 ..       9      71 .. 0.61
   2 ?    8.2   0.6   0.00098       2.9      45      81 ..     100     137 ..      81     139 .. 0.64

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.054
     DUF3040 48 avllfvaGllllvlGvaaaa..vvlgvvGfvvml 79
                 +l++++ +l+++lG+++    ++++++ +++++
  EPX70457.1 28 QWLGILSIFLCIILGIVNLFhiTLVVLFSALTIV 61
                4555555666777775544444444444444444 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.00098
     DUF3040  45 avlavllfva.GllllvlGvaaaavvlgvvGfvvmlag 81 
                 +++  +++ + G ++ v+ ++aa vvlg++G+   +ag
  EPX70457.1 100 IYAIFAVVTFlGCIFSVTSLIAAGVVLGLTGICYTFAG 137
                 23333333224888899997777799999999999887 PP

>> DUF373  Domain of unknown function (DUF373)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   9.3    0.0021       6.3     159     239 ..      39     120 ..      25     146 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0021
      DUF373 159 vplGll.lliyalllllglpelalaiillllGlylllrGfgldelleelleklkesleegritfvtyvvallllligiisgy 239
                 ++lG++ l+ ++l++l++  +++ +++l+++ l +l r   + ++++++++++ + +++g i  +++vv++l  ++++ s +
  EPX70457.1  39 IILGIVnLFHITLVVLFSALTIVEGVLLVFIELPFLARICPVSQKFQTFTNTFASNYYRGLIYAIFAVVTFLGCIFSVTSLI 120
                 4556652344555566999999**********************************************99998888887665 PP

>> DUF5592  Family of unknown function (DUF5592)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   3.7   0.00027      0.82      16      59 ..      24      67 ..      12      72 .. 0.90
   2 ?   -0.8   0.4      0.75   2.2e+03      49      54 ..     103     108 ..      80     126 .. 0.55
   3 ?   -0.2   0.2      0.52   1.6e+03      14      37 ..     114     137 ..     101     145 .. 0.61

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00027
     DUF5592 16 aiyLtDlllllvlllltmklsslvhaslvvlfyifviilviflv 59
                 iy + l++l ++l + + + +l+h +lvvlf  ++i+  ++lv
  EPX70457.1 24 SIYAQWLGILSIFLCIILGIVNLFHITLVVLFSALTIVEGVLLV 67
                699999*****************************999888877 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.75
     DUF5592  49 ifviil 54 
                 if ++ 
  EPX70457.1 103 IFAVVT 108
                 222222 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.52
     DUF5592  14 nkaiyLtDlllllvlllltmklss 37 
                 ++   L+  +++l l ++  ++  
  EPX70457.1 114 FSVTSLIAAGVVLGLTGICYTFAG 137
                 444455555666666666666665 PP

>> Cytochrom_B558a  Cytochrome Cytochrome b558 alpha-subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.1     0.047   1.4e+02      30      49 ..      16      35 ..      10      40 .. 0.78
   2 ?    1.9  11.1     0.049   1.5e+02      14     130 ..      32     143 ..      20     148 .. 0.71

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.047
  Cytochrom_B558a 30 gqfkkwefaayaiaagvfvc 49
                     g++k+w+f+ ya   g++ +
       EPX70457.1 16 GELKSWNFSIYAQWLGILSI 35
                     899*********98887544 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.049
  Cytochrom_B558a  14 lasglillaggivavagqfkkwefaayaiaagvfvclleyprgkrkkgstmercgqkyltavvkvfgpltrnyyvravlhaalavpa..gfll. 104
                      + s ++ ++ giv          f+a +i+ gv+++++e p   r        + qk+ t        ++ nyy r +++a++av +  g ++ 
       EPX70457.1  32 ILSIFLCIILGIVNLFHITLVVLFSALTIVEGVLLVFIELPFLARICP-----VSQKFQTFT-NT---FASNYY-RGLIYAIFAVVTflGCIFs 115
                      5555666777888888888888999***************99887544.....456655433.33...356777.7888888887653344441 PP

  Cytochrom_B558a 105 ..atilgtvclaiasliyllaairgeew 130
                        + i   v l+++ + y  a i+g+ +
       EPX70457.1 116 vtSLIAAGVVLGLTGICYTFAGIKGQAF 143
                      113467789****************876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1106  (0.0616878); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 1147.10
//
Query:       EPX70458.1  [L=359]
Description: glyceraldehyde-3-phosphate dehydrogenase Tdh1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.2e-71  238.1   0.0    5.3e-71  237.3   0.0    1.4  1  Gp_dh_C       Glyceraldehyde 3-phosphate dehydrogenase, C-ter
    8.5e-40  135.2   0.1    1.6e-39  134.3   0.1    1.4  1  Gp_dh_N       Glyceraldehyde 3-phosphate dehydrogenase, NAD b
  ------ inclusion threshold ------
      0.021   14.9   0.6      0.074   13.2   0.6    2.1  1  DapB_N        Dihydrodipicolinate reductase, N-terminus
       0.15   11.4   0.0       0.26   10.6   0.0    1.3  1  2-Hacid_dh_C  D-isomer specific 2-hydroxyacid dehydrogenase, 


Domain annotation for each model (and alignments):
>> Gp_dh_C  Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  237.3   0.0   1.2e-74   5.3e-71       1     158 []     180     337 ..     180     337 .. 1.00

  Alignments for each domain:
  == domain 1  score: 237.3 bits;  conditional E-value: 1.2e-74
                 HHHHHHHHHHHHEEEEEEEEEEEECTTTSBSSSS--.SSTTTTSBTTCSSEEEE-THHHHHHHHSGGGTTTEEEEEEEESSSSEEEEEEEEEESSTS-H CS
     Gp_dh_C   1 LaplakvlndkfgikkglmttvhaytndQkllDgpskkdlrraraaaeniiptstgaakavglVlpelkgkldglAvrVPtpnvsvvdlvvelekevtv 99 
                 Laplakv+nd+fgi++glmttvh+ t++Qk++Dgps+kd+r +r+a+ niip++tgaakavg+V+p+l+gkl+g+A+rVPt+nvsvvdl+ +l+k++++
  EPX70458.1 180 LAPLAKVINDAFGIEEGLMTTVHSSTATQKTVDGPSSKDWRGGRTASANIIPSTTGAAKAVGKVIPSLNGKLTGMAFRVPTTNVSVVDLTARLAKPTNY 278
                 8************************************************************************************************** PP

                 HHHHHHHHHHHHTTTTTTEEEEHSHHHGGGGTTGCSSEEEEGGGCEEETTTEEEEEEEE CS
     Gp_dh_C 100 eevnaalkeaaegalkgilsyteeelvssDlvgdphssifdaketivveenlvkvvawy 158
                 e++++a+k+aaeg+lkgil yte+ +vs+D++gd+hssifda+++i+++ ++vk+vawy
  EPX70458.1 279 EDIKKAIKAAAEGPLKGILCYTEDAVVSTDFNGDTHSSIFDASAGIQLSPQFVKLVAWY 337
                 **********************************************************9 PP

>> Gp_dh_N  Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.3   0.1   3.5e-43   1.6e-39       2     100 ..      27     126 ..      26     127 .. 0.99

  Alignments for each domain:
  == domain 1  score: 134.3 bits;  conditional E-value: 3.5e-43
                 EEEEESTSHHHHHHHHHHHHHTTCEEEEEE-.TS-HHHHHHHHHEETTTEC-SS-EEEETTEEEETTEEEEEE--SSGGGS-CHHHTSSEEEE-SSS-- CS
     Gp_dh_N   2 kvainGfGRIGrlvlralleekelevvaind.ltdletlayllkyDsvhgrfkgeveaeeealvvngkkikvlaekdpeelpwkelgvdlVvestGvft 99 
                 k++inGfGRIGr+vlr +++ k++evva+nd ++dle++ay++kyDs+hgrf+gev a++ +lv++g++i+v++ek+p++++w+ +g+++V+estGvft
  EPX70458.1  27 KIGINGFGRIGRIVLRNAIQAKTVEVVAVNDpFIDLEYMAYMFKYDSTHGRFPGEVCAKNGKLVIDGQTITVFNEKEPANIKWNTAGAEYVIESTGVFT 125
                 8******************************99*****************************************************************9 PP

                 S CS
     Gp_dh_N 100 d 100
                 +
  EPX70458.1 126 T 126
                 8 PP

>> DapB_N  Dihydrodipicolinate reductase, N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.6   1.6e-05     0.074       2      33 ..      27      57 ..      26     144 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.6e-05
                EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEE CS
      DapB_N  2 kvavvGasGrmGkevvkaveeaedlelvaavd 33
                k++++G+ Gr+G+ v++ + +a+ +e+va+ d
  EPX70458.1 27 KIGINGF-GRIGRIVLRNAIQAKTVEVVAVND 57
                89*****.********************9976 PP

>> 2-Hacid_dh_C  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   5.7e-05      0.26      38      66 ..      27      56 ..       3      75 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 5.7e-05
                  EEEEES-SHHHHHHHHHHH.HTT-EEEEES CS
  2-Hacid_dh_C 38 tvGiiGlGrIGqavakrlk.afgmkviayd 66
                  ++Gi G+GrIG+ v + +  a  ++v+a++
    EPX70458.1 27 KIGINGFGRIGRIVLRNAIqAKTVEVVAVN 56
                  79************9987536677888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (359 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       395  (0.0220313); expected 358.6 (0.02)
Passed bias filter:                      326  (0.0181828); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.46
# Mc/sec: 2337.47
//
Query:       EPX70459.1  [L=68]
Description: transcription factor TFIIH complex subunit Tfb5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-24   85.2   0.3    2.5e-24   85.0   0.3    1.0  1  Tfb5      Transcription factor TFIIH complex subunit Tfb5


Domain annotation for each model (and alignments):
>> Tfb5  Transcription factor TFIIH complex subunit Tfb5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.0   0.3   1.4e-28   2.5e-24       1      67 [.       1      66 [.       1      67 [. 0.96

  Alignments for each domain:
  == domain 1  score: 85.0 bits;  conditional E-value: 1.4e-28
        Tfb5  1 MvkaikG.vLveCDpaikqlilkldeqepsqkfiiedLDethlfvkeevveelkkeleellekntyep 67
                M++a+kG +LveCDp++kqlil++de++    ++ie++D+++l+v+e+ +e++k+ele++le+nty+ 
  EPX70459.1  1 MPRAQKGlLLVECDPTVKQLILNIDEKS--PGIVIEEIDDERLLVNEHRLEQIKAELERRLEENTYQV 66
                9******6689****************6..69**********************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       733  (0.0408835); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.28s 00:00:00.65 Elapsed: 00:00:00.43
# Mc/sec: 470.77
//
Query:       EPX70460.1  [L=1964]
Description: N-end-recognizing protein Ubr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-18   67.2  11.9    1.1e-18   67.2  11.9    2.3  2  zf-UBR     Putative zinc finger in N-recognin (UBR box)
  ------ inclusion threshold ------
      0.011   15.5   0.0      0.033   14.0   0.0    1.8  2  ClpS       ATP-dependent Clp protease adaptor protein ClpS
      0.024   14.6   0.2      0.024   14.6   0.2    4.2  3  zf-RING_5  zinc-RING finger domain
       0.11   12.0   1.9       0.11   11.9   0.1    1.9  2  ELL        RNA polymerase II elongation factor ELL
       0.17   11.8   2.0        2.4    8.1   0.1    2.9  2  STAG       STAG domain


Domain annotation for each model (and alignments):
>> zf-UBR  Putative zinc finger in N-recognin (UBR box)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.2  11.9   2.9e-22   1.1e-18       1      70 []      95     164 ..      95     164 .. 0.92
   2 ?   -5.1   3.2         5   1.8e+04      14      30 ..    1834    1851 ..    1833    1859 .. 0.75

  Alignments for each domain:
  == domain 1  score: 67.2 bits;  conditional E-value: 2.9e-22
      zf-UBR   1 kCtkvfkkgevvyrCltCsldetsviCeeCfkaskHeghelvelstkrng.gvCdCGdeeawkeegfCkkh 70 
                 +C+++fkkgev+yrC+tCs+d++s++C++Cf+a++H+ghe+ +++++ ++ g+CdCG+++aw +e  Ck h
  EPX70460.1  95 SCGRIFKKGEVFYRCKTCSIDSNSALCVKCFRATNHKGHET-SFTISAGSgGCCDCGNSSAWIREMPCKIH 164
                 5****************************************.666666555************9999*988 PP

  == domain 2  score: -5.1 bits;  conditional E-value: 5
      zf-UBR   14 rCltCslde.tsviCeeC 30  
                  +C +C +++ + +iC  C
  EPX70460.1 1834 KCSKCLTEPlEPAICLFC 1851
                  589998885245888888 PP

>> ClpS  ATP-dependent Clp protease adaptor protein ClpS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       3.4   1.2e+04      17      34 ..     191     208 ..     191     209 .. 0.87
   2 ?   14.0   0.0   9.3e-06     0.033       5      53 ..     242     291 ..     239     299 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 3.4
                 -HHHHHHHHHHHSSS-HH CS
        ClpS  17 tmefVvevLqkvfgkske 34 
                 t+e V + + +vf++s e
  EPX70460.1 191 TIECVLDFILDVFHCSPE 208
                 678999999******987 PP

  == domain 2  score: 14.0 bits;  conditional E-value: 9.3e-06
                 -EEEEEES-S-S-HHHHHHHHHHHSSS.-HHHHHHHHHHHHHHSEEEEEE CS
        ClpS   5 qYkvvLlNDdvttmefVvevLqkvfgk.skeeAteimlevhreGravvgv 53 
                  Y ++L+ND+ +++ +  e ++ +f+  + +  +++   ++ +Gra v +
  EPX70460.1 242 LYSLMLWNDEKHSFKQFYEQITIAFDApNDSFGQRLSNIINDTGRACVVT 291
                 79*************************89999**************9976 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -8.3   8.3         5   1.8e+04      25      33 ..     121     129 ..      91     151 .. 0.66
   2 ?   14.6   0.2   6.6e-06     0.024      12      43 ..    1291    1342 ..    1284    1343 .. 0.94
   3 ?    0.6   3.9      0.16   5.8e+02      25      44 .]    1835    1853 ..    1834    1857 .. 0.84

  Alignments for each domain:
  == domain 1  score: -8.3 bits;  conditional E-value: 5
   zf-RING_5  25 CekClkkll 33 
                 C kC++   
  EPX70460.1 121 CVKCFRATN 129
                 444444444 PP

  == domain 2  score: 14.6 bits;  conditional E-value: 6.6e-06
   zf-RING_5   12 eekfyltsCgHifCekClkkll....................ekeavCpiCr 43  
                  +++ y  sCgH ++ +C+k+l+                     ke+ Cp+C+
  EPX70460.1 1291 DRGLYANSCGHLMHIDCFKNLMtsvtlttrsnpyrnhphnlsMKEFLCPLCK 1342
                  5778899********************************************8 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.16
   zf-RING_5   25 CekClkkllekeavCpiCrk 44  
                  C+kCl++ l ++a C +C++
  EPX70460.1 1835 CSKCLTEPL-EPAICLFCGQ 1853
                  889999999.8999999976 PP

>> ELL  RNA polymerase II elongation factor ELL
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   3.1e-05      0.11     191     276 ..     863     952 ..     850     956 .. 0.81
   2 ?   -3.7   0.2       1.8   6.4e+03     124     157 ..    1112    1146 ..    1108    1179 .. 0.61

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 3.1e-05
         ELL 191 skrplreRliHlLaLkpykkpELllrLkkdgikdrdknelesiLkevakl.......kdntyvLkrqlykevqedwpfyseqekqllkrrkpr 276
                 ++ +++  + HlL ++p   +E++ r+ +  + +r+    e++L+e+++           t+ Lk++ ++ ++     ys ++++  + ++ r
  EPX70460.1 863 MSDNIKHEIAHLLCFQPLSYSEIIKRVCEHFLDQREF---EETLHEITNFrpaeginDTGTFALKDEYFNLIDPFNVHYSRNQREEAELILRR 952
                 56799***********************999988875...56677777776667776678************998888888776655544444 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 1.8
         ELL  124 ekmaqaeeee.kskcireikpnqsdigrkvklkkp 157 
                  +++++aee e ++  ir  k+ q++i  + +l+++
  EPX70460.1 1112 QSLSEAEESEqRQAKIRLAKERQQRIMEQFRLQQN 1146
                  56777777541455677777777777766654443 PP

>> STAG  STAG domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.1   0.00066       2.4       2      49 ..     824     871 ..     823     879 .. 0.91
   2 ?    1.9   0.3     0.058   2.1e+02      76     103 ..    1108    1135 ..    1056    1150 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00066
        STAG   2 eYpliskkkklkkfrknlveFfeklvesahekglLydeelmenlltwl 49 
                 +Y++ +k+ ++ ++ + l eF+  +++ ++++ +L d ++ +n+ + +
  EPX70460.1 824 NYFIAHKHYDIPQLSSMLEEFMLLIISLVSHTAILDDRNMSDNIKHEI 871
                 69*************************************999997655 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.058
        STAG   76 vevakelskeleklqrqleaekkkkkan 103 
                  ++va++ls++ e+ qrq +    k++++
  EPX70460.1 1108 SKVAQSLSEAEESEQRQAKIRLAKERQQ 1135
                  4677777777777777777777766633 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1964 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       860  (0.047967); expected 358.6 (0.02)
Passed bias filter:                      499  (0.027832); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.08u 0.31s 00:00:01.39 Elapsed: 00:00:00.50
# Mc/sec: 11767.26
//
Query:       EPX70461.1  [L=205]
Description: mago binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-10   41.2   0.2    2.5e-10   40.0   0.2    1.6  1  Mago-bind  Mago binding


Domain annotation for each model (and alignments):
>> Mago-bind  Mago binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.0   0.2   1.4e-14   2.5e-10       1      27 []      15      41 ..      15      41 .. 0.95

  Alignments for each domain:
  == domain 1  score: 40.0 bits;  conditional E-value: 1.4e-14
   Mago-bind  1 GeriIpaSqRpDGtvRKeirVRpGYtP 27
                G+ +Ip+S+R DG+vR   +VRpGY++
  EPX70461.1 15 GKLVIPESRRKDGSVRQKLQVRPGYIA 41
                788**********************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2070  (0.115455); expected 358.6 (0.02)
Passed bias filter:                      543  (0.0302861); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 1359.49
//
Query:       EPX70462.1  [L=203]
Description: DNA-directed RNA polymerase III complex subunit Rpc25 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.2e-40  137.3   0.0      5e-40  136.7   0.0    1.3  1  RNA_pol_Rbc25  RNA polymerase III subunit Rpc25
    1.2e-16   60.8   0.0    1.7e-16   60.3   0.0    1.2  1  SHS2_Rpb7-N    SHS2 domain found in N terminus of Rpb7p/Rpc25
     0.0042   17.4   0.0       0.01   16.2   0.0    1.7  1  S1             S1 RNA binding domain


Domain annotation for each model (and alignments):
>> RNA_pol_Rbc25  RNA polymerase III subunit Rpc25
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.7   0.0   8.3e-44     5e-40       1     129 []      79     202 ..      79     202 .. 0.96

  Alignments for each domain:
  == domain 1  score: 136.7 bits;  conditional E-value: 8.3e-44
                    -STTSEEEEEEEEEETTCEEEEBTTBSEEEEECCCCSTTEEEECCCTCEEEEES.....SSEEEEE-TTSEEEEEEEEEEE-------HHHHHCHH CS
  RNA_pol_Rbc25   1 PfvgevltgkiksstregikvslgffddifvpkelLfepsefdeeeqawvweve.....eeeelyldvgeeirfrveeeifvdvkpkspkeaelee 91 
                    Pf+gev+ g+iks++++gi+v+lgffdd+f+pk++Lf+ps +++ee+awvw++e        ely+dv+eeirf+ve+e+fvd++pk++k      
     EPX70462.1  79 PFRGEVMLGRIKSCSEDGIRVTLGFFDDLFIPKDMLFDPSVYRPEERAWVWKLEgeegqPGPELYFDVDEEIRFQVESEEFVDISPKRNK------ 168
                    9*****************************************************99998889************************9888...... PP

                    HCCTS-SS--SSTTS--S-SCEEEEEB-STTTCECGCC CS
  RNA_pol_Rbc25  92 eeaseeeaeeeeeekekkspyevlgsiqedGlGlvsWw 129
                         ++a   +e+ e+ +py++++s+++dGlG+ +Ww
     EPX70462.1 169 ----GATAVAGSEALESMAPYTIIASCARDGLGIPVWW 202
                    ....45678999999*********************** PP

>> SHS2_Rpb7-N  SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.3   0.0   2.9e-20   1.7e-16       2      70 .]       9      77 ..       8      77 .. 0.98

  Alignments for each domain:
  == domain 1  score: 60.3 bits;  conditional E-value: 2.9e-20
                 EEEEE-GGGTTSTHHHHHHHHHHHHHTTBEETTTEEEEEEEEEEEECCEEE-TTTSSEEEEEEEEEEEE CS
  SHS2_Rpb7-N  2 dtvrlePsylgstledallerllekyegkvvpslGvivavldiaeysegkvlggsGsvyvrVtfralvF 70
                 d+++++Ps + ++ ++al+e++ +ky +kv++++G+ ++v+d ++++eg++  g Gs++++Vtfr++vF
   EPX70462.1  9 DIISIHPSNFWKPTKEALAEEIHKKYANKVIQEVGLAICVYDFTKIGEGIIKYGNGSSFMNVTFRLIVF 77
                 89******************************************************************9 PP

>> S1  S1 RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   1.7e-06      0.01       2      37 ..      79     114 ..      78     158 .. 0.83

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.7e-06
                 STTTCEEEEEEEEEETTEEEEEETTTEEEEEEGGGS CS
          S1   2 pekgevveGeVtsvtkgGafVelgngvegfvpasel 37 
                 p+ gev+ G ++s++++G++V lg   + f+p+  l
  EPX70462.1  79 PFRGEVMLGRIKSCSEDGIRVTLGFFDDLFIPKDML 114
                 899*********************9999***98665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       477  (0.0266049); expected 358.6 (0.02)
Passed bias filter:                      471  (0.0262703); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 1505.50
//
Query:       EPX70463.1  [L=463]
Description: sulfide-quinone oxidoreductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-11   44.3   0.0    9.1e-06   25.1   0.0    2.2  2  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
    2.4e-07   30.3   0.2      0.002   17.4   0.1    3.1  3  Pyr_redox_3    Pyridine nucleotide-disulphide oxidoreductase
     0.0018   17.9   0.0        1.7    8.1   0.0    2.2  2  DAO            FAD dependent oxidoreductase
     0.0077   15.4   0.0       0.66    9.0   0.1    2.8  3  GIDA           Glucose inhibited division protein A
  ------ inclusion threshold ------
       0.15   11.1   0.1       0.46    9.5   0.0    1.7  2  FAD_binding_2  FAD binding domain


Domain annotation for each model (and alignments):
>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.0   2.6e-09   9.1e-06       1     119 [.      33     162 ..      33     197 .. 0.72
   2 !   17.2   0.0   6.7e-07    0.0024     195     285 ..     261     350 ..     225     361 .. 0.69

  Alignments for each domain:
  == domain 1  score: 25.1 bits;  conditional E-value: 2.6e-09
                  CSEEEE--SHHHHHHHHHHHH.................HTS-EEEEETTHCHHHCSHHHHCHHHHHHHHHHHHHHHHHCHHHHCCCCHCCTCEEEEES CS
                  xxxxxxxxxxxxxxxxxxxxx.................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2   1 kdvvviGgGpAGlaaaltlaq.................agakvtlvelegtclnggcllskallgvaedaeiasevvkklnqgielllgeevvkidpg 81 
                  ++v+++GgG AG++aa+++ +                 +++++ +v ++  +++ ++  + a +g ++ a+  ++  + + ++  +l+ e v ++ p+
   EPX70463.1  33 HKVLIVGGGSAGISAAHQIYNkfskyrfangdgkdtsiKSGEIGIV-DGAKHHYYQPGWTLAGAGLSSVAKNQRNLSDLVPSDKFKLHPEFVQSLNPK 129
                  58*******************8855666555555444445555555.999999999999887777777777666544444444444444347777777 PP

                  CEEEEETEEECTCEEEEEESEEEE---EEE-BCTCTTC CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2  82 kkkvklekkkegdeekiaydklvlAtGssprdlgipGv 119
                    k++      + +++i yd+l++A G ++    ++G+
   EPX70463.1 130 DNKIVT-----QGGHEISYDYLIMAAGIHTDFERVKGL 162
                  777777.....56789***********87755577776 PP

  == domain 2  score: 17.2 bits;  conditional E-value: 6.7e-07
                  HTTEEEEESCEEEEEEETTE.EEE.EEETTSCE..EEESEEEE-S-EEES-HHCSHCCT-EEEETTEEE--TTS..BESSTTEEE-GGGCTECCSS- CS
                  xxxxxxxxxxxxxxxxxxxx.xxx.xxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 195 keGvevklgtsvkeidgnge.kle.vvledgee..idadlvvvavGvrpstelleeklglelderggivvdefl..rtnvpgiyaiGDvaggkggpe 285
                  +++v++  +++  e++g+++       ++++++   + dl + av +  s++++  k+ l+ d++g++ v++     t+ p+++aiGD+    g p 
   EPX70463.1 261 HRNVHLNYNNNLIEVNGKERkA-VfQNTTNNTTfeRPFDL-LHAVPFMRSHDFV-AKSDLA-DKAGFVAVNPATtqSTKFPNVFAIGDCS---GLPT 350
                  3478888888888888888843.33444455544344554.5566666666676.788886.69*******99874577**********9...4443 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.5   0.0    0.0012       4.3       1      16 [.      36      51 ..      30      59 .. 0.79
   2 ?    2.6   0.0     0.018        64     219     276 ..     108     161 ..      97     178 .. 0.64
   3 !   17.4   0.1   5.7e-07     0.002     220     305 .]     258     343 ..     244     343 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0012
  Pyr_redox_3  1 iIiGaGPaGlaaaiel 16
                 +I+G+G aG++aa+++
   EPX70463.1 36 LIVGGGSAGISAAHQI 51
                 5889999999888876 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.018
  Pyr_redox_3 219 eelvkeekikvlfnaevkeikekeeeykvktedgkkvevkddvvlatGykpdlsflkk 276
                   +lv ++k+k++ +  v++++ k+++  + t+ g+++ ++d  ++a G + d++ +k 
   EPX70463.1 108 SDLVPSDKFKLHPE-FVQSLNPKDNK--IVTQGGHEI-SYDYLIMAAGIHTDFERVKG 161
                  55555555665555.56666666554..556666664.57888888888888888874 PP

  == domain 3  score: 17.4 bits;  conditional E-value: 5.7e-07
  Pyr_redox_3 220 elvke..ekikvlfnaevkeikekeeeykvk.tedgkkvevkddvvlatGykpdlsflkkslfeldedgrpvlte.eteetnvpglflaG 305
                  +   +  +++++ +n+++ e++ ke++   + t++++++e   d + a+ +  +++f++ks +++ + g++++++  t++t++p++f +G
   EPX70463.1 258 Q---TlhRNVHLNYNNNLIEVNGKERKAVFQnTTNNTTFERPFDLLHAVPFMRSHDFVAKSDLAD-KAGFVAVNPaTTQSTKFPNVFAIG 343
                  3...233569999********9777766554388889999*******************988876.9999999996789********999 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.0   0.00048       1.7       1      18 [.      34      51 ..      34      59 .. 0.91
   2 !    7.7   0.0   0.00064       2.3     170     264 ..     124     207 ..     115     261 .. 0.66

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00048
                EEEEECTSHHHHHHHHHH CS
         DAO  1 dvviiGGGiiGlstAyeL 18
                +v+i+GGG +G+s+A++ 
  EPX70463.1 34 KVLIVGGGSAGISAAHQI 51
                59*************986 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.00064
                 EEEEEEETCEEEEEEECT.EEEEEEEEEEE--GGGHH..HHHTT.CTTTSEEEEEEEEEEEEEECCTHSTGSGCSEEEEEEEETTTTEEEEEETTSEEE CS
         DAO 170 tgleeedgkvwgverttp.gendaadavVnaaGawsd..llgll.keldlpispvrgqvlvlkplseklvspaailpvpetdddgrgvyvtprkdgrvl 264
                 ++l+ +d    ++  +t+ g++ ++d++++aaG+++d   +++l + ld p +pv   + +  +       ++ ++p+ ++++ g+ ++  p  +g ++
  EPX70463.1 124 QSLNPKD---NKI--VTQgGHEISYDYLIMAAGIHTDfeRVKGLsEALDDPSVPVTTIYSAK-H-------ADSVFPLIQKTTSGTAIFTQP--SGVLK 207
                 5553333...344..466577767799**********8655555566665667755444443.1.......235566665555444444433..35444 PP

>> GIDA  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.1   0.00019      0.66       1      19 [.      34      52 ..      34      58 .. 0.89
   2 ?    0.2   0.0     0.085     3e+02     109     151 ..     114     153 ..     100     185 .. 0.79
   3 ?    2.0   0.0     0.024        86     246     367 ..     227     348 ..     211     360 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00019
                CEEEE-SSHHHHHHHHHHH CS
        GIDA  1 dviViGgGhAGceAAlaaa 19
                +v ++GgG AG+ AA ++ 
  EPX70463.1 34 KVLIVGGGSAGISAAHQIY 52
                699************9985 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.085
                 TTEEEEES-EEEEEECTTEEEEEEETTS-EEEECEEEE--TT- CS
        GIDA 109 pnleiieeeveeliveekkvkgvvtedgetikakavviatGtf 151
                 ++ ++  e v++l++++   + +vt+ g++i+ +  ++a+G  
  EPX70463.1 114 DKFKLHPEFVQSLNPKD---NKIVTQGGHEISYDYLIMAAGIH 153
                 56677888899999944...55899***************974 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.024
                 HHHCTCCC-T.T----.B--S-CCC-SSTCCCCCCST...T-S--EEEEEESSTT--EEEEET----S-HHHHHHHHTTSTT-TT--EEE--EEEEEEE CS
        GIDA 246 iikenlkksaklfegc.ieelgprycpsiedkivrla...dkeshqvfLepegleteliylvgfstslpeevqkevlrsipGLenaeivrpGyaieydy 340
                  +++nl+   ++++gc      +ry + +e +   l+   + +++   +e +g+e +++  ++ +++ ++e   ++l+ +p ++  ++v    + +   
  EPX70463.1 227 NVRNNLQV--SFYSGCpTLFSVKRYSDALERQNQTLHrnvHLNYNNNLIEVNGKERKAV-FQNTTNNTTFERPFDLLHAVPFMRSHDFVAKSDLADKAG 322
                 56777776..5799997556678999999998877776666677777778877776654.555666667777778888888888888888777776666 PP

                 E-GGGB-T.TSBBSSSBTEEE-CGGGTB CS
        GIDA 341 vdprqlln.tLetkkvkgLflAGqinGt 367
                 + +   ++ t ++ k +++f+ G+ +G 
  EPX70463.1 323 FVAV--NPaTTQSTKFPNVFAIGDCSGL 348
                 5554..3446777779999999998886 PP

>> FAD_binding_2  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.0   0.00013      0.46       2      18 ..      35      51 ..      34      57 .. 0.91
   2 ?   -2.0   0.0      0.39   1.4e+03     387     403 ..     331     347 ..     318     355 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00013
                   EEEE--SHHHHHHHHHH CS
  FAD_binding_2  2 viViGsGlAGLaAAlea 18
                   v+++G+G AG +AA+++
     EPX70463.1 35 VLIVGGGSAGISAAHQI 51
                   9*************986 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.39
                    TEEESSBTEEE-STCEE CS
  FAD_binding_2 387 adgqpipGLYAaGevaa 403
                     + +  p+ +A+G + +
     EPX70463.1 331 TQSTKFPNVFAIGDCSG 347
                    467899*******9984 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (463 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       452  (0.0252106); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 3167.68
//
Query:       EPX70464.1  [L=248]
Description: hypothetical protein SOCG_04742 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      0.006   16.3   5.8      0.009   15.7   5.8    1.2  1  DUF1404   Protein of unknown function (DUF1404)
  ------ inclusion threshold ------
       0.16   10.2   4.2        0.2    9.9   4.2    1.1  1  DUF2070   Predicted membrane protein (DUF2070)


Domain annotation for each model (and alignments):
>> DUF1404  Protein of unknown function (DUF1404)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   5.8     1e-06     0.009      30     111 ..      87     177 ..      77     195 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1e-06
     DUF1404  30 hyalviggiligykllklkkilll.........iglilavlwhlPlfFelgaaslsvrileelslllgGlllGssikalskvvkitllalw 111
                  y +v+++i+ gyk+  ++k++             ++la+l+ +P  +  ++++++v ++   sl ++G+++   +k++    k+  +a +
  EPX70464.1  87 IYNIVFIAIVFGYKVSPYSKTFYGlagssigsiCTSLLAILYIYPEWYRQAGINMCVAVICTASLNVAGFVVYFNVKKIIGFEKMNDIAFY 177
                 5999**********999955552223444444388999*********************************98888887666665555544 PP

>> DUF2070  Predicted membrane protein (DUF2070)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   4.2   2.2e-05       0.2      76     199 ..      82     215 ..      67     221 .. 0.65

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 2.2e-05
     DUF2070  76 lltelivviisllaillsall..qalvllalvlslalvfalrllvlvavsdesllkav...lpaliqpllailllvly.........fspesfllllll 160
                  ++++i+ i +++ai++ + +  ++ +++ l+ s + ++  +ll ++ +  e +++a     +a+i ++++ ++ +++         f++ + + ++ +
  EPX70464.1  82 TIITIIYNI-VFIAIVFGYKVspYSKTFYGLAGSSIGSICTSLLAILYIYPEWYRQAGinmCVAVICTASLNVAGFVVyfnvkkiigFEKMNDIAFYGV 179
                 566777777.444444454555766666666666444444444444444443333332233677777777777776667899***99989999999999 PP

     DUF2070 161 slifalavylfivvvdrplkrnlgvsaldllsaFlahil 199
                 +++ a++++lf ++ d +      v + dl ++ l++i 
  EPX70464.1 180 CIVNAAVFVLFWRYPDARQL---RVFIADLGNGMLNSIK 215
                 99999999999988876554...4668888888877776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       770  (0.0429472); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 1716.92
//
Query:       EPX70465.1  [L=682]
Description: transketolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   6.8e-141  469.0   0.0   8.7e-141  468.7   0.0    1.1  1  Transketolase_N  Transketolase, thiamine diphosphate binding 
    3.7e-45  153.8   0.0    8.2e-45  152.7   0.0    1.6  1  Transket_pyr     Transketolase, pyrimidine binding domain
    5.1e-12   45.8   0.0      1e-11   44.8   0.0    1.6  1  Transketolase_C  Transketolase, C-terminal domain
    6.9e-08   31.8   0.0    1.3e-07   30.9   0.0    1.4  1  E1_dh            Dehydrogenase E1 component
      1e-05   25.4   0.1    8.3e-05   22.4   0.1    2.2  1  TPP_enzyme_C     Thiamine pyrophosphate enzyme, C-terminal TP
     0.0031   16.8   0.0     0.0053   16.0   0.0    1.4  1  DXP_synthase_N   1-deoxy-D-xylulose-5-phosphate synthase


Domain annotation for each model (and alignments):
>> Transketolase_N  Transketolase, thiamine diphosphate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  468.7   0.0  2.9e-144  8.7e-141       1     334 []       6     340 ..       6     340 .. 0.98

  Alignments for each domain:
  == domain 1  score: 468.7 bits;  conditional E-value: 2.9e-144
                      HHHHHHHHHHHHHHHHHHHHT-S--HHHHHHHHHHHHHHHHT--B-TTBTT-TTS-EEEESSGGGHHHHHHHHHHTTSS--HHHHTTTTSTT-S CS
  Transketolase_N   1 idkkavnaiRvLavDavekaksGhPGaplgladiaevlfkkllkhnPndpkwidRDRfvLsnGhaslllYsllhLtGydlsledlksfrqlgsk 94 
                      id+ a+n+iR L++D+ ++aksGhPGap+gla++++vlf++++k nP+ pkw++RDRf+LsnGha++l+Y++ hL+Gy++s++dlk+frq+gsk
       EPX70465.1   6 IDQLAINTIRTLSIDTTSNAKSGHPGAPMGLAPASHVLFSRIMKFNPKSPKWLNRDRFILSNGHACALQYVMCHLLGYQMSIDDLKKFRQVGSK 99 
                      57899***************************************************************************************** PP

                      S-SS--TTT.STT--S---STTHHHHHHHHHHHHHHHHHHHH-BTTB-S----EEEEEEHHHHHSHHHHHHHHHHHHTT-TTEEEEEEESSEET CS
  Transketolase_N  95 tpGhPelgh.tagvevttGPLGqGianavglalaektlaatynkpgfdivdhytyvilgDgclmeGvsseasslagtlkLgkLivlyDdnkisi 187
                      tpGhPe+++ t  +e+ +GPLGqGia+avgla+ +++ aa ynkpgfdi+d+ t+++lgDgcl+eG+ssea+slag+lkLg+Li+++D+nki+i
       EPX70465.1 100 TPGHPETHDpTLNIETGAGPLGQGIAAAVGLAIGKAHSAAVYNKPGFDIFDNNTFCFLGDGCLQEGISSEACSLAGHLKLGNLIAIWDNNKITI 193
                      ******6542457899999*************************************************************************** PP

                      TEEGGGT--S-HHHHHHHTT-EEEEE.TTTT-HHHHHHHHHHHHH-TTS-EEEEEE--TTTTSTTTTTSGGGTSS---HHHHHHHHHHTTS-TT CS
  Transketolase_N 188 dGeteisftedvakrfeaygWhviev.edgedveaikaaieeakaekdkPsliklrtviGygspakagtedvhGapLgedevaalkkklGfdpe 280
                      dG+t+ sf+edv+kr+eaygW++++v ++++d+eai++a +ea a +dkP+li+l+t+iG+gs +++gt++vhG+pL+ d+  ++kk +Gf+pe
       EPX70465.1 194 DGSTDLSFDEDVEKRYEAYGWQILRVeNGDSDLEAIEKAYREAIACTDKPTLINLKTTIGFGS-QQQGTHSVHGSPLKPDDAVHVKKLFGFNPE 286
                      **************************88899********************************.****************************** PP

                      -TS---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTT--- CS
  Transketolase_N 281 ksfevpeevydaykekvaegakaeeeWeekfaaykkkapeeaaelerrlsgelP 334
                      +sf+vp+evy+ y+++v+e++++++e+++++a+y++ ++++ ++ler+l+ +lP
       EPX70465.1 287 QSFHVPAEVYQFYQKRVEENQAVQKEYDAMYAKYAQTHADLYNQLERILNRHLP 340
                      *************************************************99998 PP

>> Transket_pyr  Transketolase, pyrimidine binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.7   0.0   2.7e-48   8.2e-45       2     176 ..     356     532 ..     355     533 .. 0.98

  Alignments for each domain:
  == domain 1  score: 152.7 bits;  conditional E-value: 2.7e-48
                   EEEHHHHHHHHHHHHHCTTTTEEEEESSTHHHHTTCHCCHHEGGT........TEGEEE--S-HHHHHHHHHHHHHHCTTEEEEEEEEHHHHGGGHH CS
  Transket_pyr   2 kiawrkaeaealaellkedpevvligaDvaggtfsvrkgllhdqg........egrvidsgisEqavlgfavGaalagpllviveaqFgdFangAqi 90 
                   ++a+rk ++ +l++l+   pe+v+++aD++ ++++ ++g  ++q+        +gr+i++gi+E++++g+++G+a+ gp  ++++++F++F++    
    EPX70465.1 356 AVATRKLSEIVLDALCPVVPELVGGSADLTPSNLTRWQGAADFQHpstnigsyAGRYIRYGIREHGMAGIMNGLAVYGP-IIPYGGTFLNFVS---- 447
                   589***************************************************************************9.*************.... PP

                   GGHHHHHCHHHHHT--EE.EEESBSGGGSTTGTTTSBSSHHHHHHTSTTEEEE--SSHHHHHHHHHHHHHSSS.SEEEEEE-SSEEC CS
  Transket_pyr  91 yadqairsgeakgklkvg.vvtrlpigvgedGpehqsaeleaflrlipglkvvrPsdpaetkhllrrairredrkPvvlrlpksllr 176
                   y   a+r ++a+ + +v+ v t+++ig+gedGp+hq++e+ +++r++p+++++rP+d +et +++  a+++  + P++l+l++++l+
    EPX70465.1 448 YGAGAVR-MAALNNSRVIyVATHDSIGLGEDGPTHQPIETFSHFRAMPNIYCWRPADGNETSAAYLGALTHC-DSPSILALTRQNLP 532
                   *******.**************************************************************84.58**********98 PP

>> Transketolase_C  Transketolase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.8   0.0   3.5e-15     1e-11       1     124 []     546     657 ..     546     657 .. 0.91

  Alignments for each domain:
  == domain 1  score: 44.8 bits;  conditional E-value: 3.5e-15
                      TEEEEEETTSSEEEEEETTHHHHHHHHHHHHHTT.TTCEEEEE-SEEESHHHHHHHHHHHHHSEEEEEEEEESTTSHHHHHHHHHHHCCCTTCS CS
  Transketolase_C   1 gkaeilregkdvtlvayGsmveealeAaeeLeke.gisaeVvdlrtvkplDketilesvkktgrlvvveeavkrgGigsevaaalaeeafdgld 93 
                      g++  ++++ +vtlv++Gs+v+ +l+A ++L++e +++a+Vv+l++ + + +++ +       rl v+ ++ + +++  ev ++l         
       EPX70465.1 546 GYVLYENKNAKVTLVGTGSEVSLCLDALKTLKSEyNLEARVVSLPCWEVFEEQDES------YRLSVIPDGIPAMSV--EVYSTLGW------T 625
                      78899999***********************************************9......9*******9997766..66666665......8 PP

                      SEEEEEEE-SS.SSSSGHHHHHHHTT-SHHHH CS
  Transketolase_C  94 apvkrvggpdv.iepgsaeelekafgldaeki 124
                      ++v+   g+   +e+g+a++l++ + +++e +
       EPX70465.1 626 RYVHEAFGMTSfGESGTAKQLYEKYEFTPEGV 657
                      899998888888****************9976 PP

>> E1_dh  Dehydrogenase E1 component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.9   0.0   4.3e-11   1.3e-07      66     224 ..      73     250 ..      59     251 .. 0.73

  Alignments for each domain:
  == domain 1  score: 30.9 bits;  conditional E-value: 4.3e-11
                 HHHHHHHHTT-T........TTSSGTT-.-E..BTT..BEEE-SSTTTHHHHHHHHHHHHH................HHTS---EEEEEEGGGTT-HHH CS
       E1_dh  66 leeilaeltgkv........kgkggsrhelmyaekesrilggngivgaqvplvaGialaak................iegkkevailliGDgAanqGdv 140
                 l+ +++ l g +          + gs+ +++ ++      + n+  ga  pl++Gia a                  ++  ++ ++++ GDg   +G+ 
  EPX70465.1  73 LQYVMCHLLGYQmsiddlkkFRQVGSKTPGHPETHD---PTLNIETGAG-PLGQGIAAAVGlaigkahsaavynkpgFDIFDNNTFCFLGDGCLQEGIS 167
                 566666666666666555433455666666633333...4445555555.6666665555555556699999999998888999*************** PP

                 HHHHHHHHHTT--E.EEEEEEESEET..TEEHHHH-S---GGG..TTTTS-EEEEETTSHHHHHHHHHHHHHHHHTTT--EEEEEEE CS
       E1_dh 141 yealnlaalwklpv.ifvveNNkygi..sTeaekasaskeladrargvgipglrVdgnDplavyeAvkfAaeraregkgpllielvt 224
                  ea  la   kl   i +  NNk+ i  sT+ +  + +++ ++ a g +i  ++    D +a+ +A ++A+  ++   +p+li+l+t
  EPX70465.1 168 SEACSLAGHLKLGNlIAIWDNNKITIdgSTDLSFDEDVEKRYE-AYGWQILRVENGDSDLEAIEKAYREAIACTD---KPTLINLKT 250
                 ********99997769*********966777777788888888.67777766665567************98665...599999876 PP

>> TPP_enzyme_C  Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.1   2.8e-08   8.3e-05      23     152 ..     112     247 ..     102     248 .. 0.75

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 2.8e-08
                   C.ETTTS-TTTHHHHHHHHHH.....H....ST.....TSEEEEEEEHHHHHHT.G.GGHHHHHHTT-SEEEEEEE-SBCCCHHHHHHHHTCCTTTT CS
  TPP_enzyme_C  23 t.sgglgtmGyglpaAiGakl.....a....kp.....drevvaivGDGgflmi.l.qelatavrrnlpitvvvlnNegygmtggqqepfggkrksg 102
                   + ++g g +G g++aA+G+++     a    kp     d++ +++ GDG+++     ++ + a   +l  ++ +++N+    + g ++  ++     
    EPX70465.1 112 NiETGAGPLGQGIAAAVGLAIgkahsAavynKPgfdifDNNTFCFLGDGCLQEGiSsEACSLAGHLKLGNLIAIWDNNKI-TIDGSTDLSFD----- 202
                   34889****************8866615776553323459************9865145566666688888999999888.45555555543..... PP

                   SBB.BS----HHHHHHHTTSEEEEESSH...HHHHHHHHHHHH.CSSSEEEEE CS
  TPP_enzyme_C 103 pagkdlkpvdfaklaealGakgarveka..dveeleealkeal.ekkgpalie 152
                          + d++k  ea+G + +rve+   d+e +e+a +ea+  +++p+li+
    EPX70465.1 203 -------E-DVEKRYEAYGWQILRVENGdsDLEAIEKAYREAIaCTDKPTLIN 247
                   .......4.889999******99888651168999999999999899999997 PP

>> DXP_synthase_N  1-deoxy-D-xylulose-5-phosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   1.8e-06    0.0053      18     175 ..       6     193 ..       1     201 [. 0.65

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.8e-06
  DXP_synthase_N  18 leela.eelrefliesvsk.tggHlasnLgvveLtlalhy.v..fdt......pkDklvwDvgHqa...YvhKiltgRkdkfktlrqkgGls... 95 
                     +++la + +r+  i++ s+ ++gH ++ +g+   +  l+  +  f+       ++D+++   gH +   Yv   l g + ++++l++   +    
      EPX70465.1   6 IDQLAiNTIRTLSIDTTSNaKSGHPGAPMGLAPASHVLFSrImkFNPkspkwlNRDRFILSNGHACalqYVMCHLLGYQMSIDDLKKFRQVGskt 100
                     55555345677777666532567777777766555444421211443221112468888888887655577777778877777666665554011 PP

  DXP_synthase_N  96 .gfpkrsEseyDa.feagHsstsisaalGlavardlkge..........kkkvvaviGDgaltgGmafealnnigelkk.kllvilNdNemsi 175
                      g+p++++ +  +  +ag  +  i+aa+Gla+ + ++            ++++ + +GDg l  G++ ea   +g+lk  +l+ i  +N+ +i
      EPX70465.1 101 pGHPETHDPTLNIeTGAGPLGQGIAAAVGLAIGKAHSAAvynkpgfdifDNNTFCFLGDGCLQEGISSEACSLAGHLKLgNLIAIWDNNKITI 193
                     24555544444432567788999*******99988777666778888888***************************9626777777777666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (682 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       501  (0.0279436); expected 358.6 (0.02)
Passed bias filter:                      473  (0.0263818); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.65u 0.31s 00:00:00.96 Elapsed: 00:00:00.47
# Mc/sec: 4379.16
//
Query:       EPX70466.1  [L=331]
Description: COPII-coated vesicle component Erv41 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.8e-34  117.9   0.0      8e-34  117.4   0.0    1.2  1  COPIIcoated_ERV  Endoplasmic reticulum vesicle transporter
    3.1e-22   78.7   0.0    6.2e-22   77.8   0.0    1.5  1  ERGIC_N          Endoplasmic Reticulum-Golgi Intermediate Com


Domain annotation for each model (and alignments):
>> COPIIcoated_ERV  Endoplasmic reticulum vesicle transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.4   0.0     9e-38     8e-34      45     221 .]     142     306 ..     127     306 .. 0.91

  Alignments for each domain:
  == domain 1  score: 117.4 bits;  conditional E-value: 9e-38
  COPIIcoated_ERV  45 klkeqkkegCrikGklevnkvaGnfhi.apgksfqeekrhvhdlssyekeklnfsHtihkLsfgeelpgekknPLdgtkkeeeekalmfqYflk 137
                      k  +++   Cri+G+l+vn+v+G++h+ apg  + +++  +h         lnf+H+i++Lsfg+ +p+  +n+Ldg+   ++++a+ fqY+l+
       EPX70466.1 142 KKPSHAGGACRIYGTLTVNRVHGQLHVtAPGWGYGSSNIPFH--------ALNFTHHIEELSFGDYYPDI-VNALDGHYGFTDKEAFAFQYYLS 226
                      333444489*****************7589******999998........79****************99.6*******9999*********** PP

  COPIIcoated_ERV 138 vvptkyekldkkkietnqysvtehersleggkdesekglPGvffsYeisPlkvivkeerksflhfltslcaiiGGvltvasliD 221
                      + pt+y+++ + +++tnqys te++ + + g ++     PG+f+ Y+i Pl v++  ++ s+++ ++++++i GG + +++++D
       EPX70466.1 227 ILPTSYKSSFR-SLQTNQYSLTENSVPRQLGFQS---KPPGIFIEYDIEPLGVQIVDKYPSIMKSFLRILSISGGLYILMNWLD 306
                      ********844.6*************99998655...59******************************************998 PP

>> ERGIC_N  Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.8   0.0   6.9e-26   6.2e-22       1      88 [.      10      97 ..      10     100 .. 0.97

  Alignments for each domain:
  == domain 1  score: 77.8 bits;  conditional E-value: 6.9e-26
                XXXXXXXXXXXXXX.X.XXXXXXXXXXXXXXXXXXXXXXXXXXX.XXX-EEEEEE--S--SEEEEEEEEEE.SS-GGGEEEEEEETTEC CS
     ERGIC_N  1 lrrfDafpKvpedltq.ktlsGgiislvcillilfLllselteylttevkeelvvdksrsekleinlditfpalpCellsldvqDesge 88
                l++fDafpKv +++++  +++Gg++sl++ +++++L+l e+++y+++  +++++v +++s+ +++nldit+ a+pC ++ +d+ D++++
  EPX70466.1 10 LESFDAFPKVVNEYRKpGSSRGGVFSLAVGFFVFWLFLVECYSYIKGVREQRIMVSDKVSDLMDLNLDITL-AMPCTHVRVDAADKTND 97
                679********************************************************************.*************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       473  (0.0263818); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 2201.63
//
Query:       EPX70467.1  [L=336]
Description: cytosolic thiouridylase subunit Ctu1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.5e-19   68.4   0.0    9.9e-19   67.8   0.0    1.3  1  ATP_bind_3     PP-loop family
    6.7e-16   57.5   2.1    6.7e-16   57.5   2.1    3.4  4  zn-ribbon_14   Zinc-ribbon
     0.0042   16.6   1.3     0.0042   16.6   1.3    3.4  4  RecR           RecR protein
     0.0059   15.4   0.0     0.0083   15.0   0.0    1.2  1  tRNA_Me_trans  tRNA methyl transferase


Domain annotation for each model (and alignments):
>> ATP_bind_3  PP-loop family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.8   0.0   2.2e-22   9.9e-19       2     176 ..      54     243 ..      53     249 .. 0.86

  Alignments for each domain:
  == domain 1  score: 67.8 bits;  conditional E-value: 2.2e-22
                 EEEE--SCHHHHHHHHHHHHHCTTTTT..EEEEEEEE-SSSTCHHHHHHHHHHHHHHTT-EEEEEE--H...........HHCTTSTCCCHHHHHHHHH CS
  ATP_bind_3   2 vlvAvSgGlDSmaLllllaklkkklgi..klvaihvdhglreeskeeaelvkelckklnikleiekvdv...........akkkgknleeaARelRYev 87 
                 v ++ SgG DS++L ++++ l+++     +l +i vd g+r   ++  ++vk+  +++ +++++ + +            a+   kn  +    +R ++
  EPX70467.1  54 VGIGASGGKDSTVLAYVMKLLNERYDYgiELYLISVDEGIRGYRDDSLATVKRNQQQYALPMTVVSYEDlydgwtmdnvvARIGLKNNCTYCGVFRRQA 152
                 6799*************998887765555***********************************999988999999876656667777778889***** PP

                 HHHCHHCCT.CEEE---BHHHHHHHHHHHHCCT--CCHHH-S-SEEEETT..CCEE-CCCT--HHHHHHHHHHTT---B--CGGGCTTSHH CS
  ATP_bind_3  88 lkealkkegievlllAhhadDqaEtfllrlargsglaglagikeaseias..irlvRPlLkvskeeleeylkekkikwveDesNadekyeR 176
                 l++a+ + +i++l+++h+adD aEt+l++l rg   +   +++  ++ ++  ++   P+  ++ +e+  y++ kk++++  e  ++ +  R
  EPX70467.1 153 LDRAALNLDIHHLVTGHNADDIAETVLMNLLRGDVARLPRSTEITTQSDTspTKRSKPFKYTYEKEIVLYAHYKKLDYFSTECTYSPEAFR 243
                 **********************************99988886666666552377788*********************9887766665555 PP

>> zn-ribbon_14  Zinc-ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.2       2.6   1.2e+04       3       6 ..       6       9 ..       5      10 .. 0.78
   2 ?    0.9   0.1     0.076   3.4e+02      12      18 ..      23      29 ..      21      30 .. 0.85
   3 ?    1.2   0.2     0.058   2.6e+02       1       8 [.     140     147 ..     140     153 .. 0.81
   4 !   57.5   2.1   1.5e-19   6.7e-16       2      29 ..     286     313 ..     285     316 .. 0.92

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 2.6
  zn-ribbon_14 3 CerC 6
                 Ce C
    EPX70467.1 6 CELC 9
                 9999 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.076
  zn-ribbon_14 12 qkiCkAC 18
                  q+iCk C
    EPX70467.1 23 QRICKDC 29
                  99***99 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.058
  zn-ribbon_14   1 gkCerCGy 8  
                   ++C+ CG 
    EPX70467.1 140 NNCTYCGV 147
                   69*****7 PP

  == domain 4  score: 57.5 bits;  conditional E-value: 1.5e-19
  zn-ribbon_14   2 kCerCGylSSqkiCkACvLLegLnkgrp 29 
                   +CerCG++SS++iCkAC+LLegLn+g  
    EPX70467.1 286 QCERCGFISSNRICKACMLLEGLNTGIT 313
                   8************************975 PP

>> RecR  RecR protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.2      0.19   8.7e+02      29      37 ..       4      12 ..       2      13 .. 0.71
   2 ?    0.6   0.0     0.093   4.2e+02       9      25 ..      16      32 ..      15      38 .. 0.76
   3 ?   -2.2   0.2      0.73   3.3e+03      19      24 ..     142     147 ..     138     151 .. 0.61
   4 !   16.6   1.3   9.3e-07    0.0042       1      34 [.     269     302 ..     269     303 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.19
                SS-CCCCST CS
        RecR 29 dlCaICsdp 37
                 lC+ C  +
  EPX70467.1  4 KLCELCDTN 12
                589999765 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.093
                HHHHHHH-EE-TTT--E CS
        RecR  9 LqeakekvrhCsrCgnl 25
                L++ k++ r C+ C+ +
  EPX70467.1 16 LVRPKTGQRICKDCFYY 32
                6666777899****976 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 0.73
                 -TTT-- CS
        RecR  19 CsrCgn 24 
                 C  Cg 
  EPX70467.1 142 CTYCGV 147
                 666654 PP

  == domain 4  score: 16.6 bits;  conditional E-value: 9.3e-07
                 HHHHHHHHHHHHHHH-EE-TTT--EESSSS-CCC CS
        RecR   1 eaeeLaeaLqeakekvrhCsrCgnlteedlCaIC 34 
                 ea +L+++ qe   + ++C+rCg ++ + +C  C
  EPX70467.1 269 EAMQLSDTVQEKLPQQTQCERCGFISSNRICKAC 302
                 57899999999999999***************99 PP

>> tRNA_Me_trans  tRNA methyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   1.9e-06    0.0083       2     131 ..      53     176 ..      52     195 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 1.9e-06
  tRNA_Me_trans   2 kvvvalSgGVDSsvaaallk...eqgyevigvflklweeedeegkeccaeedlkdaervaeklgiplevvdfekeykekvfeefleeyeeGrTPnP 94 
                    kv ++ SgG DS+v a+++k   e++    g+ l l++  de   +   ++ l++++r  ++  +p++vv++e+ y    +++++     G   n 
     EPX70467.1  53 KVGIGASGGKDSTVLAYVMKllnERYD--YGIELYLISV-DEGI-RGYRDDSLATVKRNQQQYALPMTVVSYEDLYDGWTMDNVVARI--GLK-NN 141
                    8999***********998762213333..4566655555.2333.5688999*********************************975..554.77 PP

  tRNA_Me_trans  95 dvlCNkeiKfgallekakeelgadalatGHYarvsle 131
                    +  C    + +al ++a  +l+++ l+tGH a    e
     EPX70467.1 142 CTYCGVF-RRQALDRAAL-NLDIHHLVTGHNADDIAE 176
                    9999754.4455555555.5**********9976665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (336 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       720  (0.0401584); expected 358.6 (0.02)
Passed bias filter:                      526  (0.0293379); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.34s 00:00:00.92 Elapsed: 00:00:00.54
# Mc/sec: 1881.01
//
Query:       EPX70468.1  [L=253]
Description: CK2 family regulatory subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-72  242.6   0.0    3.1e-72  242.2   0.0    1.1  1  CK_II_beta  Casein kinase II regulatory subunit
  ------ inclusion threshold ------
       0.27   10.1   0.0       0.38    9.6   0.0    1.1  1  DUF3326     Protein of unknown function (DUF3326)


Domain annotation for each model (and alignments):
>> CK_II_beta  Casein kinase II regulatory subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  242.2   0.0   3.4e-76   3.1e-72       2     182 .]      39     222 ..      38     222 .. 0.97

  Alignments for each domain:
  == domain 1  score: 242.2 bits;  conditional E-value: 3.4e-76
  CK_II_beta   2 WiswflslkgneyfvevdedfiedkfnltgLseevpnykealelildveeeeeleeseksevessaelLYgliHaryiltkkglakmlekykkkefgrC 100
                 Wi+wf+s++g+eyfvev ++fied fnltgL+  vp y+eal+lild++++e+l++ +   +e+sa++LYgliH+ryi+t+ gl++m+eky+++ fg C
  EPX70468.1  39 WITWFCSQPGREYFVEVRDEFIEDLFNLTGLNLAVPFYNEALDLILDRNNSETLKKLDMGVIETSAQILYGLIHQRYIITRMGLHQMAEKYSTGIFGCC 137
                 *************************************************************************************************** PP

  CK_II_beta 101 prvlCekqkvLPvGlsdkpgektvklyCpkCedvYspkssrsrsidGafFGttfphlllltypelepkk...skekyepriyGfk 182
                 prv+C  ++vLP G+sd++g+  v l+Cp+C d+Y p+ss+ ++idG+fFGttfphl+++typel+pk+    +++y+priyGfk
  EPX70468.1 138 PRVNCCYTHVLPAGRSDVVGRMPVVLFCPNCLDLYAPSSSKYKNIDGSFFGTTFPHLFFETYPELNPKRaipCGKIYQPRIYGFK 222
                 ****************************************999***********************976222579*********8 PP

>> DUF3326  Protein of unknown function (DUF3326)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.0   4.2e-05      0.38      74     131 ..      74     132 ..      57     136 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 4.2e-05
     DUF3326  74 pvrqnrvglildkgieeelrlrhlqvada.aratlGlnitevvvtdaplevelrkaesG 131
                 p +++ + lild++ +e+l++ ++ v+++ a+  +Gl  +++++t   l+   +k ++G
  EPX70468.1  74 PFYNEALDLILDRNNSETLKKLDMGVIETsAQILYGLIHQRYIITRMGLHQMAEKYSTG 132
                 67788899*******************97367889***********9999988888777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (253 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       483  (0.0269396); expected 358.6 (0.02)
Passed bias filter:                      369  (0.0205812); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.31s 00:00:00.85 Elapsed: 00:00:00.50
# Mc/sec: 1517.47
//
Query:       EPX70469.1  [L=380]
Description: DUF1682 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-74  250.6   0.7    2.6e-74  250.4   0.7    1.0  1  DUF1682   Protein of unknown function (DUF1682)


Domain annotation for each model (and alignments):
>> DUF1682  Protein of unknown function (DUF1682)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  250.4   0.7   1.4e-78   2.6e-74       1     323 []      53     375 ..      53     375 .. 0.92

  Alignments for each domain:
  == domain 1  score: 250.4 bits;  conditional E-value: 1.4e-78
     DUF1682   1 nfklEilllvllllyvlnyfiGkrkNkkiAkkwaaahkpllesnFalvgfdaekksslllkeseseftlyatGRrnvasllvtlkLlkRqdll....sl 95 
                 +fk+E+++l++++lyv+ +++ krkN+  A++w++++++l++++F+++g    ++ s+++  s++e+++y tGR nv+ +++tl+L++Rqdl+    + 
  EPX70469.1  53 DFKVELIVLSVFALYVFSFITKKRKNADFASRWYNSLQSLFRNQFSQYGP--GRNMSPVINVSPTEYSSYLTGRINVKNVYTTLQLFPRQDLFtygiNQ 149
                 7************************************************7..89999************************************666666 PP

     DUF1682  96 llelvlslffesvaapkDrveievyledgk.amdgfVfavvkKkemkklrkdrydlesltktkdnsklpeelvvmsEsaevteallt.pellkalnkag 192
                 l+e++++ +++ v ++ Dr+++ ++l +++  +++fVfa+v+K++m+ lr+ r+dl s+t+ +++++lp+++v+msE  e+te +l+ p++l  ++++ 
  EPX70469.1 150 LVEIFMGNIMSPVLPVADRFQVLLNLGNHAkPWQPFVFAIVRKDCMRILRETRFDL-SFTRISSHPSLPDTHVLMSENLECTERILNlPQFLPSIQSCM 247
                 7777777788888899**********876679************************.************99***************6277********* PP

     DUF1682 193 klleyliitDqpskkpetke..serkrlilslrlpssss....dleelspllklvlrliDklakraklrpevlkklkktReevekklkkeaeeekaEea 285
                 ++ley+i+tDqps+ p++++   e +r+ +s+r+++ ++    +  ++++ll+ +l ++D+ a ++++rpe++kkl++ R+ + ++++++++++ka   
  EPX70469.1 248 ENLEYFIVTDQPSAAPANEKeyIEYPRIDASIRIDNVDTfnelENPKANDLLNTLLLIADNTA-KFQWRPEITKKLTSSRKLALEEIVHASAAAKA--- 342
                 ****************9976676779********9663344467778889*************.9***********************99997775... PP

     DUF1682 286 qekkeeekkkereeklaklspeeqrKyeekerkkeakK 323
                       + kk  + ++++ls+ eq+K +eker+++ kK
  EPX70469.1 343 -----TRSKKSTASEVSNLSETEQKKRLEKERQRKIKK 375
                 .....455667777799*******************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (380 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1446  (0.0806515); expected 358.6 (0.02)
Passed bias filter:                      559  (0.0311785); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.34s 00:00:00.97 Elapsed: 00:00:00.51
# Mc/sec: 2254.79
//
Query:       EPX70470.1  [L=124]
Description: cytochrome b5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.9e-22   77.8   0.1    6.3e-22   77.5   0.1    1.1  1  Cyt-b5    Cytochrome b5-like Heme/Steroid binding domain
  ------ inclusion threshold ------
       0.13   11.8   0.0        0.2   11.2   0.0    1.2  1  NapE      Periplasmic nitrate reductase protein NapE


Domain annotation for each model (and alignments):
>> Cyt-b5  Cytochrome b5-like Heme/Steroid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.5   0.1   7.1e-26   6.3e-22       2      73 ..       8      78 ..       7      79 .. 0.96

  Alignments for each domain:
  == domain 1  score: 77.5 bits;  conditional E-value: 7.1e-26
                HHHHTTTECTTEEEEEETTEEEECTTTCCCSTTCSHHHHTTTTSBBHHHHHHTTGGCHHHHHHHHGGEEEEE CS
      Cyt-b5  2 leelskhngkndlwvairgkVYDvskflskhpGgesailkyaGkDateafksvvhsekdaekllkkylvGkl 73
                +ee+ +hn+++dl+++++gkVYDv++f+++hpGg +++l+y G+D+t+a  +v hs + a +ll+++++G+l
  EPX70470.1  8 AEEVVQHNSPKDLYMVFEGKVYDVTSFAEDHPGGLDILLDYGGQDCTKAYRDVGHSAA-ADELLQEMYIGDL 78
                79***************************************************99888.8**********98 PP

>> NapE  Periplasmic nitrate reductase protein NapE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   2.2e-05       0.2      17      33 ..     101     117 ..      89     119 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 2.2e-05
        NapE  17 kaflfltvvlfPiLsVa 33 
                  +f++l+++l+P+L+V+
  EPX70470.1 101 SIFMILALILVPALAVI 117
                 57**************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       418  (0.0233142); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.36s 00:00:00.90 Elapsed: 00:00:00.54
# Mc/sec: 690.50
//
Query:       EPX70471.1  [L=152]
Description: hypothetical protein SOCG_04735 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.045   14.4   0.2       0.13   12.9   0.0    1.8  2  LAMTOR    Late endosomal/lysosomal adaptor and MAPK and MTOR 
       0.16   12.4   2.5       0.24   11.8   2.5    1.4  1  MKRN1_C   E3 ubiquitin-protein ligase makorin-1, C-terminal


Domain annotation for each model (and alignments):
>> LAMTOR  Late endosomal/lysosomal adaptor and MAPK and MTOR activator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   1.4e-05      0.13       1      59 [.      15      66 ..      15      81 .. 0.80
   2 ?   -0.7   0.1      0.25   2.2e+03      24      36 ..      93     105 ..      69     116 .. 0.51

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.4e-05
      LAMTOR  1 nErtrLLadpqnnsgnysrgydnslqqqeqespekltdeqeaLnkIvqetsdnlIDI.Sa 59
                +E t+LL  p+ + +  ++     ++ ++++s  k+++e+e  +kI +++ +n ID+ S+
  EPX70471.1 15 DEVTPLL--PNEGIQ--RT----APTAESNMSLRKRQKEEEFESKIYENAKNNFIDVfSM 66
                6889999..544444..33....67889999*****9999999**************999 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.25
      LAMTOR  24 slqqqeqespekl 36 
                 +l ++++ s + +
  EPX70471.1  93 DLAPEYETSTPTE 105
                 2333333333333 PP

>> MKRN1_C  E3 ubiquitin-protein ligase makorin-1, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   2.5   2.7e-05      0.24       9      79 ..      50     119 ..      33     122 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.7e-05
     MKRN1_C   9 ssrnrnqrrthlweileeresespfdnddeelvtfeLselLlmllaagaddEltdsedewdlfheeLedfy 79 
                 s  + n  ++++ +++  r  ++p++  ++e    eL + +  l +a + +  t +e++ +++ ++L+ f 
  EPX70471.1  50 SKIYEN-AKNNFIDVFSMRLRTEPLERTQDENTYEELMDQMNSLDLAPEYETSTPTEQDQEFIQKKLDLFL 119
                 444444.499**************************************99999**************9886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       957  (0.0533772); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.34s 00:00:00.93 Elapsed: 00:00:00.55
# Mc/sec: 830.01
//
Query:       EPX70472.1  [L=712]
Description: origin recognition complex subunit Orc1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.4e-17   62.7   0.0    1.1e-16   61.4   0.0    1.7  1  AAA            ATPase family associated with various cellular
    3.5e-11   43.0   0.2    1.1e-10   41.4   0.1    1.9  2  BAH            BAH domain
    9.6e-10   38.5   0.2      3e-09   36.9   0.2    1.8  1  AAA_lid_10     AAA lid domain
    5.2e-08   33.3   0.0    1.4e-07   31.9   0.0    1.8  1  AAA_22         AAA domain
    8.3e-08   32.8   0.0    1.1e-06   29.1   0.0    2.5  1  AAA_16         AAA ATPase domain
    6.6e-05   23.3   0.0    0.00012   22.4   0.0    1.5  1  AAA_19         AAA domain
     0.0011   19.0   0.0     0.0023   17.9   0.0    1.5  1  NACHT          NACHT domain
     0.0049   16.8   0.0      0.048   13.6   0.0    2.5  1  ATPase_2       ATPase domain predominantly from Archaea
  ------ inclusion threshold ------
      0.047   12.9   0.0      0.083   12.1   0.0    1.3  1  DUF2075        Uncharacterized conserved protein (DUF2075)
      0.054   13.3   0.6       0.13   12.1   0.0    1.8  2  AAA_11         AAA domain
       0.11   12.0   0.4       0.58    9.6   0.0    2.0  2  UvrD-helicase  UvrD/REP helicase N-terminal domain
       0.13   12.3   0.0       0.45   10.5   0.0    1.9  1  ResIII         Type III restriction enzyme, res subunit


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.4   0.0   7.4e-20   1.1e-16       2     130 ..     371     513 ..     370     515 .. 0.87

  Alignments for each domain:
  == domain 1  score: 61.4 bits;  conditional E-value: 7.4e-20
                 EEESSTTSSHHHHHHHHHHHH..........THEEEEEETTTCSSS................STTHHHHHHHHHHHHHHHTSTS.EEEEEETGGGHHHH CS
         AAA   2 llyGppGtGKTllakavakel..........gvefleisgsellsk................yvgesekkirelfkeakekakp.silfiDEidalaks 73 
                 +++G+pGtGKT++++ v+ +l          +++f+ei+g+++++                 +  ++++ + + f++ + ++ + +++++DE+d+l+++
  EPX70472.1 371 YISGTPGTGKTATVHEVVWNLqemaregqlaEFTFCEINGMKVTNAnqaysslwesltgervTPLHAMELLDNRFNHPSPNR-CsCVVLMDELDQLVTN 468
                 789*****************74444444333588**********7789********99888888888888888888876666.55************** PP

                 HTTCCCHHHHHHHHHHHHHHHHTTTSSSTEEEEEEESSGGGSTHHHHSTTSSEEEET CS
         AAA  74 rsgseseeeervvnqLlteldgvkkkeskvivigatnrpdkldpallrgRfdrkiei 130
                 +           +++L++++++ +  +s++ivi+++n++d +++ l  +R+++++ +
  EPX70472.1 469 N-----------QKVLYNFFNWPSLPHSRLIVIAVANTMDLPERILS-NRISSRLGL 513
                 *...........********************************999.9*9998766 PP

>> BAH  BAH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.4   0.1   7.5e-14   1.1e-10       2     113 ..      64     181 ..      63     188 .. 0.85
   2 ?   -3.7   0.0       7.1   1.1e+04      29      50 ..     463     481 ..     448     484 .. 0.75

  Alignments for each domain:
  == domain 1  score: 41.4 bits;  conditional E-value: 7.5e-14
                 EEETTGEEEEEETTSTTEEEEEEEEEEEEETTST.CEEEEEEEEEEECGGGS..TTTTHCCCT....TEEEEEEEEEEEEGGGEEEEEEEEEHHHHCTE CS
         BAH   2 tyavGdfVyfddtstdepyqirrIeeLkenakne.eaeatvlvdwflrpeet..ksalklrqk....rElfltrqseilplaairgkcrVvllsdleea 93 
                  y+ Gd ++++d +    ++++ I eL+ +a  + + e++ ++ w++r  +   + +++ + +    +E++l++ +++ p ++i+++c++++++++++ 
  EPX70472.1  64 IYRLGDDITVNDGD--SSFYVGVITELYDKATTKhSGEKYYEAIWYSRAVAKrmEIKPEYLLPdrhvNEVYLSCGRDENPTSSIIEHCNIYSKEEFFKR 160
                 5999*******999..9**********8887777679*********777665555555555555566******************************** PP

                 CCHCH.HCSTTEEEEEEEEET CS
         BAH  94 qnylp.kklddtFycslvydp 113
                  ++ +  k++d+F  ++++d+
  EPX70472.1 161 FPQGIpPKKKDDFARNFFVDR 181
                 999988778888988888876 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 7.1
                 EEETTSTCEEEEEEEEEEECGG CS
         BAH  29 kenakneeaeatvlvdwflrpe 50 
                  +   n+   ++vl ++f +p+
  EPX70472.1 463 DQLVTNN---QKVLYNFFNWPS 481
                 4445566...899999999996 PP

>> AAA_lid_10  AAA lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.9   0.2     2e-12     3e-09      45      80 ..     543     578 ..     524     581 .. 0.90

  Alignments for each domain:
  == domain 1  score: 36.9 bits;  conditional E-value: 2e-12
                 ------HHHHHHHHHHT-TTTTHHHHHHHHHHHHHH CS
  AAA_lid_10  45 isddaieiasrkvAsvsgdarrAlkiCkrAvEiaek 80 
                  s dai+ a+rkvA vsgdarrAl iC+r  E+ae 
  EPX70472.1 543 FSSDAIRFAARKVAAVSGDARRALDICRRSSELAES 578
                 689******************************996 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.9   0.0   9.2e-11   1.4e-07       3     115 ..     365     479 ..     362     502 .. 0.79

  Alignments for each domain:
  == domain 1  score: 31.9 bits;  conditional E-value: 9.2e-11
      AAA_22   3 ktagilvvtGesGtGKTtllrrlleqldeeakaee.erpevvfvtlpsstsskdllrellralglelkaerlsseell.ealeqalraravielliiDE 99 
                 +t g+l++ G +GtGKT ++ +++ +l+e a   + ++ ++ +++  + t+  + ++ l + l+ e+ + +l   ell +++++ + +r    +++ DE
  EPX70472.1 365 ETGGCLYISGTPGTGKTATVHEVVWNLQEMAREGQlAEFTFCEINGMKVTNANQAYSSLWESLTGERVT-PLHAMELLdNRFNHPSPNRCS-CVVLMDE 461
                 589**********************9976544444778888899999999*******************.999999999**********99.******* PP

      AAA_22 100 aqhlr..seealeeLrsl 115
                  + l   ++++l ++ ++
  EPX70472.1 462 LDQLVtnNQKVLYNFFNW 479
                 ***965434444444333 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1   0.0   7.5e-10   1.1e-06       2      86 ..     344     436 ..     343     490 .. 0.73

  Alignments for each domain:
  == domain 1  score: 29.1 bits;  conditional E-value: 7.5e-10
      AAA_16   2 lvGReeeleqLlsalervrsgrp.elvllsGesGvGKsslvrellralekd.......ggiflrgkcdql.....esaipysalaqalareellrqll 86 
                 l +R++e  ++ + le++ + ++ +++++sG +G+GK++ v e+   l++        ++ f    c+ +      ++ +ys l++ l+  e ++ l+
  EPX70472.1 344 LQCRDNEFTTIFTNLESAIEEETgGCLYISGTPGTGKTATVHEVVWNLQEMaregqlaEFTF----CEINgmkvtNANQAYSSLWESLTG-ERVTPLH 436
                 679*************88888888*****************999866666555333333333....222222223355788888888866.4444444 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.0   8.2e-08   0.00012       3     114 ..     360     465 ..     358     540 .. 0.76

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 8.2e-08
      AAA_19   3 eavealkekvllvtaGpGtGKTrvlkhivallvelggvkp........eeillvaftgrAakelrerlaalgaeatTiHrlal..............ld 79 
                 +a+e+ + ++l + + pGtGKT +++++v  l+e+ ++           + + v+ +++A + l e+l   g++ t +H++ l                
  EPX70472.1 360 SAIEEETGGCLYISGTPGTGKTATVHEVVWNLQEMAREGQlaeftfceINGMKVTNANQAYSSLWESL--TGERVTPLHAMELldnrfnhpspnrcsC- 455
                 678888999*******************9999988876556778777666677888899999999998..6777888888744333333333333330. PP

      AAA_19  80 fddlltealelleeaeeekklqeeellivDEfqdv 114
                                          +++ DE  ++
  EPX70472.1 456 -------------------------VVLMDELDQL 465
                 .........................4444444443 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   1.5e-06    0.0023       4     139 ..     371     502 ..     369     529 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 1.5e-06
                 EEEC-TTTCHHHHHHHHHHHHCTS-SCCCC-SEEEEEETTTTTTS-.....-HCHHHCCCCTS--SSS-C...CHHHHCCSCCCEEEEEE-STT-SS-T CS
       NACHT   4 ilqGeaGsGKTtLlqklalawaegklpqgafklvFflslrelsrsgna..rsladllfsqlpepaapvse...vwavllelperlLlilDglDelvtdl 97 
                  + G +G GKT+ +++++  ++e   +++  ++ F    ++  +  n    sl + l+ +   p  + +     +++   ++ + + ++D lD+lvt +
  EPX70472.1 371 YISGTPGTGKTATVHEVVWNLQEMAREGQLAEFTFCEINGMKVTNANQaySSLWESLTGERVTPLHAMELldnRFNHPSPNRCSCVVLMDELDQLVTNN 469
                 689**********************9998767776644443333333358999999999999998887553334444445555678***********88 PP

                 CH.........HHHHHCTTTTT--EEEEEEECCCHHHHCTTS CS
       NACHT  98 gqkekqpvrtlLselirkkllpeasllltvrpralrdleeql 139
                 ++        +L + ++  +lp ++l++++  ++  dl+e +
  EPX70472.1 470 QK--------VLYNFFNWPSLPHSRLIVIAVANTM-DLPERI 502
                 88........*****************99988877.655554 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.0   3.2e-05     0.048      10     148 ..     357     479 ..     353     497 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 3.2e-05
    ATPase_2  10 eleeilerepneiyfiYGpegsGKtaLlkeiienledkdk.yviyyialreesiskldefieeeeekkklekalgiavpkaeleeilkeksklvfkaie 107
                 +le+ +e+e+   ++i G  g GKta + e++ nl++      +  + + e++  k+++           ++a ++  ++ ++e++   +   + + ++
  EPX70472.1 357 NLESAIEEETGGCLYISGTPGTGKTATVHEVVWNLQEMAReGQLAEFTFCEINGMKVTNA----------NQAYSSLWESLTGERV---TPLHAMELLD 442
                 6999*******************************7755424555555555555555555..........3333333333333333...2345566677 PP

    ATPase_2 108 lllekikkkgkkiiiiiDelqklidlglngaellvkeLlnl 148
                 + ++  + ++   ++++Del +l+  +  ++++++++++n 
  EPX70472.1 443 NRFNHPSPNRCSCVVLMDELDQLV--T--NNQKVLYNFFNW 479
                 777777777777899999999998..3..357778888875 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   5.5e-05     0.083       4     102 ..     370     467 ..     368     479 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 5.5e-05
     DUF2075   4 vlVtGvaGtGKtvvllnllael.eddeeertavylsvNhplvlvlrealakkeekkkkkeafeklssfinnlsefkkaeekkeepkedvvivDEAhrll 101
                 + ++G +GtGKt    +++ +l e+ +e++ a +     + ++v   + a+++  ++ + +   +   ++ l+  ++ ++  +++  +vv++DE   l 
  EPX70472.1 370 LYISGTPGTGKTATVHEVVWNLqEMAREGQLAEFTFCEINGMKVTNANQAYSSLWESLTGERVTPLHAMELLD--NRFNHPSPNRCSCVVLMDELDQLV 466
                 679*******************666677788888887777777777777777733333333334444445555..555688999999999999977777 PP

     DUF2075 102 t 102
                 t
  EPX70472.1 467 T 467
                 6 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.4         2   2.9e+03     133     158 ..     210     249 ..     174     285 .. 0.48
   2 ?   12.1   0.0   8.5e-05      0.13      12      44 ..     360     394 ..     354     423 .. 0.76

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 2
      AAA_11 133 leklakelrafeeeeek..............eklkkskek 158
                 l + +++lr  +++ +               ++l+ ++++
  EPX70472.1 210 LVEMEETLRLPKKKTNArgrgrgrpkkrseeKNLEDNDDF 249
                 4444444444333333333333322221211111111111 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 8.5e-05
      AAA_11  12 salsese..itliqGPPGtgKTktivellsqllsr 44 
                 sa++e+      i+G PGtgKT t+ e++ +l ++
  EPX70472.1 360 SAIEEETggCLYISGTPGTGKTATVHEVVWNLQEM 394
                 556655556779**************999998544 PP

>> UvrD-helicase  UvrD/REP helicase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.2      0.42   6.3e+02     127     212 ..     130     242 ..     103     283 .. 0.64
   2 ?    9.6   0.0   0.00039      0.58       6      37 ..     359     391 ..     355     408 .. 0.79

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.42
                    H....................HCCHHHHHHHHHSC.HSHTTTTHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHCHHHHHHHHHHHTTCCTTHHCH CS
  UvrD-helicase 127 e....................dlkqqellkellek.saddslnldkkkleklikelsksrnikkeelslskskaeelrelvskakekqlspkelkk 201
                    e                    +  ++e +k+  +   ++++ +++ +++  +  +l ++++ +  + s +   +++++ l+ +++e +  pk++++
     EPX70472.1 130 EvylscgrdenptssiiehcnIYSKEEFFKRFPQGiPPKKKDDFARNFFVDRGVHLKVNKYTEPLNWSEYSHNLDKIEDLLVEMEETLRLPKKKTN 225
                    444555554455555555553444444455444446667777888888888888888888888888888888888888888888888888888888 PP

                    SS...........TSCSHHHHH CS
  UvrD-helicase 202 af...........ekasdlqkk 212
                    a            e     +k 
     EPX70472.1 226 ARgrgrgrpkkrsE-----EKN 242
                    77777777543221.....222 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00039
                    HHHHHS.-SSEEEEEE-TTSSHHHHHHHHHHHH CS
  UvrD-helicase   6 reaias.lggpilveAsAGsGKTfvlaerilrl 37 
                    ++ai+  +gg + ++  +G+GKT+++ e++ +l
     EPX70472.1 359 ESAIEEeTGGCLYISGTPGTGKTATVHEVVWNL 391
                    5778887999999************99887665 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0    0.0003      0.45      12      53 ..     355     396 ..     337     406 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.0003
                 HHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S... CS
      ResIII  12 ienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgk 53 
                  +nl+++++++    ++i  + GtGKT +  +++++l++ ++
  EPX70472.1 355 FTNLESAIEEETGGCLYISGTPGTGKTATVHEVVWNLQEMAR 396
                 34555555433444455999*****************98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (712 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       715  (0.0398795); expected 358.6 (0.02)
Passed bias filter:                      530  (0.029561); expected 358.6 (0.02)
Passed Vit filter:                        76  (0.00423894); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.83u 0.39s 00:00:01.22 Elapsed: 00:00:00.57
# Mc/sec: 3745.73
//
Query:       EPX70473.1  [L=566]
Description: meiotic cohesin complex subunit Rec8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.8e-28   97.5   0.1    8.8e-28   96.7   0.1    1.4  1  Rad21_Rec8_N  N terminus of Rad21 / Rec8 like protein
    1.6e-13   49.7   2.0    2.3e-13   49.2   0.0    2.3  3  Rad21_Rec8    Conserved region of Rad21 / Rec8 like protein
     0.0099   15.8   0.6      0.025   14.5   0.0    1.9  2  SMC_ScpA      Segregation and condensation protein ScpA
  ------ inclusion threshold ------
      0.039   13.9   0.1       0.08   12.9   0.1    1.5  1  DCP1          Dcp1-like decapping family


Domain annotation for each model (and alignments):
>> Rad21_Rec8_N  N terminus of Rad21 / Rec8 like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.7   0.1     2e-31   8.8e-28       1     102 [.       1     111 [.       1     117 [. 0.90

  Alignments for each domain:
  == domain 1  score: 96.7 bits;  conditional E-value: 2e-31
  Rad21_Rec8_N   1 Mfysqellsk.kgplakvWlaAtl.ek....klskkeilevniekaveeIlnpeaplaLrlsgqLllGvvriyskkvkyllsDceealekikkafks 91 
                   Mfy q +l+k kg+++ vWlaAtl +k    kl+kk+i++vni++a+e ++ + +plaLrls++L++Gv+r+y +++++++s++++++++++k + +
    EPX70473.1   1 MFYDQYVLTKkKGGMGVVWLAATLgSKhslrKLHKKDIMSVNIDEACEFVAYSPEPLALRLSSNLMIGVARVYAHQYSFFQSQVSSLHSRLRKELDN 97 
                   9*********9*************8889************************99***************************************9997 PP

  Rad21_Rec8_N  92 i.k.ea.kidlpee 102
                   i + ++ +id + e
    EPX70473.1  98 ItSkHSkNIDARVE 111
                   74333446766654 PP

>> Rad21_Rec8  Conserved region of Rad21 / Rec8 like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1      0.74   3.3e+03      23      34 ..       1      12 [.       1      12 [. 0.89
   2 ?   -2.7   0.1      0.82   3.7e+03       4      16 ..     158     170 ..     156     170 .. 0.82
   3 !   49.2   0.0   5.2e-17   2.3e-13       3      52 ..     515     564 ..     513     565 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.74
                HHHHHHHHHHHT CS
  Rad21_Rec8 23 lFyelLvLatkg 34
                +Fy+  vL +k+
  EPX70473.1  1 MFYDQYVLTKKK 12
                8*******9985 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.82
                 HHTT--------- CS
  Rad21_Rec8   4 ekdslsllpagkt 16 
                 +++sl++lp++++
  EPX70473.1 158 NLTSLQTLPEASN 170
                 6899*****9875 PP

  == domain 3  score: 49.2 bits;  conditional E-value: 5.2e-17
                 HHHTT----------HHHHHHHHHHHHHHHHTSEEEEESSTT--EEEEE- CS
  Rad21_Rec8   3 kekdslsllpagktRkeAArlFyelLvLatkgvIkvkQeaPYgdIlitlg 52 
                 ++ +++ llp   +R +AA++F++lL L+tk++++vkQeaPY +I+++l+
  EPX70473.1 515 GDMTFSELLPCTLQRSVAAQAFSHLLALSTKSAVSVKQEAPYHEIILSLN 564
                 677899999**************************************986 PP

>> SMC_ScpA  Segregation and condensation protein ScpA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1      0.56   2.5e+03      73     153 ..     311     340 ..     285     367 .. 0.48
   2 !   14.5   0.0   5.5e-06     0.025     187     239 ..     513     562 ..     468     564 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.56
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
    SMC_ScpA  73 elrdkLiarLleYrkykeeaklfkeleaerlksfskarsdleefikeveevavkieksvfklieafnkllkrakivalaek 153
                 ++r   ++r+                                                    ie  +k ++r+ + a ++k
  EPX70473.1 311 QWRSTYVERMK--------------------------------------------------AIE-TAKHVRRKGTSAEKKK 340
                 33333333332..................................................221.1233333333333333 PP

  == domain 2  score: 14.5 bits;  conditional E-value: 5.5e-06
                 HHTS-EEGGGSSTT...--HHHHHHHHHHHHHHHHTT-EEEEESSTTS-EEEE CS
    SMC_ScpA 187 dlrswvdlseLladnkledkkelvgvFlAlLeLiknqavaleQeeflddLqvs 239
                 + ++ + +seLl++    ++     +F  lL L+ ++av++ Qe ++ ++  s
  EPX70473.1 513 N-GGDMTFSELLPC--TLQRSVAAQAFSHLLALSTKSAVSVKQEAPYHEIILS 562
                 3.46789*******..888899999***********************99765 PP

>> DCP1  Dcp1-like decapping family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   1.8e-05      0.08      67     114 ..     458     505 ..     444     508 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.8e-05
                 SS--EEEEESSGGGEEEETTEEEEEETTTEEEEEEESSHHHHHHHHHH CS
        DCP1  67 slenliedltkelelelqgeyliyrteeeevfgiWfyeeedreriasl 114
                 +++++  +l++el ++l++++ +y++++ee +g +++ e+++ +++++
  EPX70473.1 458 ESSQYHDHLNSELSIQLDEDFSLYKNTQEENIGTFLHMERECANFYEY 505
                 566778899***********************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (566 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       737  (0.0411066); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 3869.79
//
Query:       EPX70474.1  [L=175]
Description: F0-ATPase subunit D [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.2e-16   58.9   1.0    6.6e-16   58.5   1.0    1.1  1  Mt_ATP-synt_D   ATP synthase D chain, mitochondrial (ATP5H)
     0.0048   16.7   0.3     0.0071   16.1   0.3    1.3  1  DUF4201         Domain of unknown function (DUF4201)
  ------ inclusion threshold ------
      0.023   14.8   4.9      0.079   13.1   2.8    2.1  2  DUF148          Domain of unknown function DUF148
      0.025   14.8   0.2      0.077   13.3   0.1    1.9  2  Rx_N            Rx N-terminal domain
      0.026   14.6   2.3       0.25   11.4   0.3    2.1  1  Baculo_PEP_C    Baculovirus polyhedron envelope protein, PEP,
      0.032   14.7   6.4       0.65   10.5   3.7    3.1  2  NPV_P10         Nucleopolyhedrovirus P10 protein
      0.036   13.0   2.4      0.056   12.3   1.3    1.6  2  Spc7            Spc7 kinetochore protein
      0.042   14.4   1.8       0.18   12.4   1.8    1.9  1  DUF2408         Protein of unknown function (DUF2408)
      0.076   12.9   1.9       0.15   11.9   1.4    1.7  2  CdvA            CdvA-like coiled-coil domain
      0.077   13.1   4.9          2    8.5   0.1    2.8  3  Vps51           Vps51/Vps67
      0.078   13.3   4.0        6.8    7.1   0.2    2.5  2  BLOC1_2         Biogenesis of lysosome-related organelles com
      0.078   13.1   1.2       0.14   12.3   1.1    1.4  1  MnmE_helical    MnmE helical domain
       0.15   11.7   3.2       0.24   11.1   3.2    1.4  1  YkyA            Putative cell-wall binding lipoprotein
       0.25   11.4   4.1        2.7    8.0   1.1    2.6  2  DUF1664         Protein of unknown function (DUF1664)
       0.26   11.0   3.3        1.1    8.9   0.9    2.3  2  RPW8            Arabidopsis broad-spectrum mildew resistance 
       0.33   11.0   4.7        6.1    6.9   0.5    2.2  2  TPR_MLP1_2      TPR/MLP1/MLP2-like protein
       0.49   11.0   3.1        1.6    9.4   1.3    2.1  2  HIP1_clath_bdg  Clathrin-binding domain of Huntingtin-interac
       0.57   10.6   4.8        1.7    9.1   4.7    1.8  1  NBD94           Nucleotide-Binding Domain 94 of RH
       0.85   10.0   3.5       0.73   10.2   0.7    2.0  2  CC2-LZ          Leucine zipper of domain CC2 of NEMO, NF-kapp
        1.4    9.4   6.9        1.8    9.0   0.8    3.0  5  FlaC_arch       Flagella accessory protein C (FlaC)


Domain annotation for each model (and alignments):
>> Mt_ATP-synt_D  ATP synthase D chain, mitochondrial (ATP5H)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.5   1.0   7.4e-19   6.6e-16       4     141 ..       7     147 ..       4     154 .. 0.92

  Alignments for each domain:
  == domain 1  score: 58.5 bits;  conditional E-value: 7.4e-19
                    ---SSS-HHHHHTTS-..GGGHHHHHHHHHHHHHHHHHHHHS-SS-----HHHHHHHSSSTTHHHHHHHHHHH-------.-TTTTHHHHHHHHHH CS
  Mt_ATP-synt_D   4 ialkaidwaalaervp..pnqkaqfkalkaksdeylrrvaklPeelpkIdWayYkknvakeglVdeFekkYealkipype.dkyteevdaeekevk 96 
                     a ka+dwaa   ++   + +++ ++++++++ +  +++ +l+e+l ++d+a Y++ ++++ +V++ e + +++k +  + d++ ++++a e +++
     EPX70474.1   7 SAVKAVDWAAVPSKLKldAGTASALANFRSRHAQAAAKLGSLKEQLTTVDFASYRQVLKNQEIVNRIESSVTSFKPVKINlDSQLKAINAFEGKAV 102
                    5899*******9876522668899**************************************************86655548888*********** PP

                    HHCHHHHHHHHHHHHHHHHHHHHHT-XXXXXXXXXXXXXXXXXXX CS
  Mt_ATP-synt_D  97 keikefkeeskkrieelekeleklksllpfeemtmedfaeafPet 141
                     ++k+ +e  k ++e+l  +l++++++ p +e+t+ed+  a Pe 
     EPX70474.1 103 GSAKKNVEMIKTELESLSTTLKNIEQARPTSEITIEDMKTAVPEV 147
                    *******************************************96 PP

>> DUF4201  Domain of unknown function (DUF4201)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.3     8e-06    0.0071      21     124 ..      34     147 ..      26     161 .. 0.79

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 8e-06
     DUF4201  21 qlakiqeklekkeelgegLtlidFeqlqi..enqalnkkIeernkeLkrlkkkttktvhalthlkeklh........mleselselkkelkekeerlak 109
                   +++++   k+  l e+Lt++dF + +   +nq+ +++Ie+    +k  k +  ++++a++    k+         m+++el+ l + lk++e+ +  
  EPX70474.1  34 FRSRHAQAAAKLGSLKEQLTTVDFASYRQvlKNQEIVNRIESSVTSFKPVKINLDSQLKAINAFEGKAVgsakknveMIKTELESLSTTLKNIEQARPT 132
                 56778888999999***********9986559******************************9988887766666668888888888888888887766 PP

     DUF4201 110 lrkelykvklerdkl 124
                  +  ++  k+    +
  EPX70474.1 133 SEITIEDMKTAVPEV 147
                 666666666555555 PP

>> DUF148  Domain of unknown function DUF148
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0      0.34     3e+02      46      72 ..      29      55 ..      20      56 .. 0.83
   2 ?   13.1   2.8   8.8e-05     0.079       5      92 ..      59     149 ..      57     157 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.34
      DUF148 46 aqkeevkknvtavisnLssvqekleaI 72
                 + ++++ +++++ ++L s +e+l+++
  EPX70474.1 29 SALANFRSRHAQAAAKLGSLKEQLTTV 55
                567789999999999999999999976 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 8.8e-05
      DUF148   5 effaIlknenltiaeieeqleawaeky.gvtdeykefeakvkaqkeevkknvtavisnLssvqekleaIld...nkslTrkeqkeaieelkk 92 
                 ++ ++lkn+++  + ie+ ++ +   + ++ +++k+ +a   ++  ++kknv+ +  +L+s ++ l++I +    ++ T++++k+a+ e++k
  EPX70474.1  59 SYRQVLKNQEI-VNRIESSVTSFKPVKiNLDSQLKAINAFEGKAVGSAKKNVEMIKTELESLSTTLKNIEQarpTSEITIEDMKTAVPEVEK 149
                 58888888887.6889999999999778***************************9999999999998876222567888888888877765 PP

>> Rx_N  Rx N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       2.9   2.6e+03      19      37 ..      37      55 ..      27      80 .. 0.62
   2 ?   13.3   0.1   8.6e-05     0.077      14      73 ..      96     152 ..      67     160 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 2.9
        Rx_N 19 llkgvkeeleklkdeLesi 37
                ++ +  ++l +lk++L ++
  EPX70474.1 37 RHAQAAAKLGSLKEQLTTV 55
                4444445555555555443 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 8.6e-05
        Rx_N  14 aeeakllkgvkeeleklkdeLesiqavLedaeerqikdeavkeWlkelrdlaydaeDvlD 73 
                 a e k + + k+ +e +k+eLes+   L+  e+ + ++   +  +++++ ++ ++e +++
  EPX70474.1  96 AFEGKAVGSAKKNVEMIKTELESLSTTLKNIEQARPTS---EITIEDMKTAVPEVEKIVE 152
                 5567899999**********************977544...3445566666666665555 PP

>> Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.3   0.00028      0.25      55     130 ..      28     108 ..      12     117 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00028
  Baculo_PEP_C  55 ksllaeldtrldtlltnLtdalnalq....dtlrneLtnlnsiltnLlssvtN...instLnnllqalnnldlgalsqeleda 130
                    s+la++++r ++++++L +   +l+     + r+ L+n + i++ + ssvt    ++  L + l+a+n+++  a+ ++ + +
    EPX70474.1  28 ASALANFRSRHAQAAAKLGSLKEQLTtvdfASYRQVLKN-QEIVNRIESSVTSfkpVKINLDSQLKAINAFEGKAVGSAKK-N 108
                   566777777666666555555555544448899999999.78**********83334566888899999998888877655.4 PP

>> NPV_P10  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.2      0.16   1.4e+02      40      57 ..      41      62 ..       3      79 .. 0.69
   2 ?   10.5   3.7   0.00072      0.65      16      73 ..      87     147 ..      58     157 .. 0.77

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.16
     NPV_P10 40 lnekLdaqsaqLaelet....k 57
                  +kL ++ +qL++++     +
  EPX70474.1 41 AAAKLGSLKEQLTTVDFasyrQ 62
                5678999999999988666663 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00072
     NPV_P10  16 vddkVdalqq.qvddvqenlpdvtelnekLdaqsaqLaelet.....kvenIqdiLnpdevPdl 73 
                 +d++++a+++ + + v +  ++v+ ++++L+++s++L+++e+     +  +I+d+ +   vP++
  EPX70474.1  87 LDSQLKAINAfEGKAVGSAKKNVEMIKTELESLSTTLKNIEQarptsE-ITIEDMKT--AVPEV 147
                 56666666652347788899999*****************99777652.23455544..45555 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.5    0.0039       3.5     197     278 ..      41     119 ..      22     120 .. 0.84
   2 ?   12.3   1.3   6.3e-05     0.056     166     251 ..      67     152 ..      58     157 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0039
        Spc7 197 dkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeaervleeckgwsesevsrlkeevkal 278
                   ++L +l+e+l++++       +++ + qe ++++e+++++ k  k +l +++++ + +  +  g+ +++v+ +k+e+++l
  EPX70474.1  41 AAAKLGSLKEQLTTVDFASY---RQVLKNQEIVNRIESSVTSFKPVKINLDSQLKAINAFEGKAVGSAKKNVEMIKTELESL 119
                 56789999999999998777...78888999999999999999999999999999999999999999999999999999877 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 6.3e-05
        Spc7 166 dellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeia 251
                 +e+++++e+  ++ +    +l ++ + +++ + + + +++++++ +k+e+e++++ l++ ++ + ++e +ie++k+   e+e+ ++
  EPX70474.1  67 QEIVNRIESSVTSFKPVKINLDSQLKAINAFEGKAVGSAKKNVEMIKTELESLSTTLKNIEQARPTSEITIEDMKTAVPEVEKIVE 152
                 56677777777777777777888888888899999999999999999999999999999999999999999999999888887665 PP

>> DUF2408  Protein of unknown function (DUF2408)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   1.8    0.0002      0.18      39      85 ..      73     156 ..      21     167 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.0002
     DUF2408  39 e......................................vkeelkelkeeLkkieskrdeegkFkseegkevvekgqavlngLld 85 
                                                        +k+el++l++ Lk+ie+ r +  + + e+ k++v++ ++++++++ 
  EPX70474.1  73 IessvtsfkpvkinldsqlkainafegkavgsakknvemIKTELESLSTTLKNIEQARPT-SEITIEDMKTAVPEVEKIVETMVT 156
                 044555555555555555555555555555555556777*******************99.555566666788888888877765 PP

>> CdvA  CdvA-like coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       3.2   2.8e+03      47      57 ..      43      53 ..      27      58 .. 0.56
   2 ?   11.9   1.4   0.00016      0.15       7      91 ..      67     151 ..      62     158 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 3.2
        CdvA 47 krlkeledqik 57
                ++l++l++q++
  EPX70474.1 43 AKLGSLKEQLT 53
                33444444444 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 0.00016
        CdvA   7 eeLvsegdipkstyeeikekleealkklkekakelkeklkkrlkeledqikslekalanlkisyasGEidEeaYksaieairell 91 
                 +e+v++ + +   ++ +k +l+++lk++++ + +     kk ++ ++ +++sl+++l n++    + Ei  e+ k+a  ++++  
  EPX70474.1  67 QEIVNRIESSVTSFKPVKINLDSQLKAINAFEGKAVGSAKKNVEMIKTELESLSTTLKNIEQARPTSEITIEDMKTAVPEVEKIV 151
                 58999999999*************************************************9999999998777776666666655 PP

>> Vps51  Vps51/Vps67
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.1    0.0023         2      21      84 ..      31      94 ..      23      97 .. 0.86
   2 ?    5.1   0.6     0.026        24      55      80 ..     104     129 ..     104     136 .. 0.90
   3 ?   -0.3   0.0       1.3   1.1e+03      59      77 ..     136     154 ..     132     157 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0023
       Vps51 21 lkellkveasllseiraldselkalVydnYskLisasdtIrkmksemdkldqklselkqaiski 84
                l+  + ++a+  ++   l+++l ++ + +Y++ ++  + +++++s++++ ++   +l++ ++ i
  EPX70474.1 31 LANFRSRHAQAAAKLGSLKEQLTTVDFASYRQVLKNQEIVNRIESSVTSFKPVKINLDSQLKAI 94
                677788999999999999999*9999*********************88888888887777766 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.026
       Vps51  55 sasdtIrkmksemdkldqklselkqa 80 
                 sa + ++ +k+e+++l+++l+++ qa
  EPX70474.1 104 SAKKNVEMIKTELESLSTTLKNIEQA 129
                 57899999**************9987 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 1.3
       Vps51  59 tIrkmksemdkldqklsel 77 
                 tI++mk+ + ++++ ++++
  EPX70474.1 136 TIEDMKTAVPEVEKIVETM 154
                 8999999998888877765 PP

>> BLOC1_2  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.2    0.0076       6.8      45      91 ..      47      94 ..      32      99 .. 0.59
   2 ?    6.5   0.5     0.012        10       5      53 ..     106     154 ..     103     161 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0076
     BLOC1_2 45 slekklekln.ekyeelqpylqqidqiekqvteLeeavseLDeyskeL 91
                sl+++l  ++ + y ++ ++ + +++ie +vt+++ +   LD+  k++
  EPX70474.1 47 SLKEQLTTVDfASYRQVLKNQEIVNRIESSVTSFKPVKINLDSQLKAI 94
                555555555434455666666666667777766666666666665554 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.012
     BLOC1_2   5 ekvskyleaeleatvedyklLeklNeaasekykklkdvaaslekklekl 53 
                 +k  ++++ ele+ ++ +k +e+   +++  ++++k+++ ++ek +e +
  EPX70474.1 106 KKNVEMIKTELESLSTTLKNIEQARPTSEITIEDMKTAVPEVEKIVETM 154
                 5667788888888888888888888888888888888888888877766 PP

>> MnmE_helical  MnmE helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   1.1   0.00015      0.14     123     193 ..      86     155 ..      32     158 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00015
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxx RF
  MnmE_helical 123 eLeeaikeleleeieeeplltnaRhkealekalealeeakealeag.lpldlvaedLrealeaLgeItGevv 193
                   +L +++k+  +++ e +++ + ++  e++++ le+l++ ++++e++  + ++  ed++ a+ ++++I+  +v
    EPX70474.1  86 NLDSQLKA--INAFEGKAVGSAKKNVEMIKTELESLSTTLKNIEQArPTSEITIEDMKTAVPEVEKIVETMV 155
                   23333322..22224479999*********************99996579999**************98766 PP

>> YkyA  Putative cell-wall binding lipoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   3.2   0.00027      0.24      47     112 ..      89     156 ..      46     167 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00027
        YkyA  47 defdkikklsdealenveeReellekekesieeakeefekikeeieei..edeelkkeaeelieamee 112
                 +++++i++   +a+ ++++  e++++e es++ + +++e+++++ e +  + +++  e+e+ +e+m +
  EPX70474.1  89 SQLKAINAFEGKAVGSAKKNVEMIKTELESLSTTLKNIEQARPTSEITieDMKTAVPEVEKIVETMVT 156
                 458999999********************************998766543334556666666666654 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.1     0.023        20      57     121 ..      31      95 ..      20      98 .. 0.74
   2 ?    8.0   1.1     0.003       2.7      74     115 ..      86     128 ..      80     159 .. 0.66

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.023
     DUF1664  57 laatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeaveglesklerie 121
                 la+ + + ++  +++++  ++ + +  +  ++v + +e +++i++ v+s k +  +l+s+l+ i+
  EPX70474.1  31 LANFRSRHAQAAAKLGSLKEQLTTVDFASYRQVLKNQEIVNRIESSVTSFKPVKINLDSQLKAIN 95 
                 55555555555566666666666666777788999999999999999999999999999998885 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.003
     DUF1664  74 kldeqkeiskeik.eevtevredlseigedvesvkeavegles 115
                 +ld+q +++++ + + v +++++++ i++++es++++ +++e+
  EPX70474.1  86 NLDSQLKAINAFEgKAVGSAKKNVEMIKTELESLSTTLKNIEQ 128
                 5555555444443256777777777777777777777776664 PP

>> RPW8  Arabidopsis broad-spectrum mildew resistance protein RPW8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.9    0.0012       1.1      18      74 ..      68     125 ..      39     128 .. 0.81
   2 ?    8.6   1.0    0.0016       1.4      18      62 ..     100     148 ..      98     166 .. 0.68

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0012
        RPW8  18 kaileakkksldfksilkrLestleritPvv.keieklnkeldrpreeieeLkklLek 74 
                 +++ + +  +++fk+   +L+s l++i+ +  k +++ +k+++  + e+e+L  +L++
  EPX70474.1  68 EIVNRIESSVTSFKPVKINLDSQLKAINAFEgKAVGSAKKNVEMIKTELESLSTTLKN 125
                 5677777788888888888888888888874367888888888888888888888875 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0016
        RPW8  18 kaileakkksldfksilkrLestleritPvvk....eieklnkeldrpr 62 
                 ka+  akk++ ++k  l++L  tl++i+  +      ie +++++ + +
  EPX70474.1 100 KAVGSAKKNVEMIKTELESLSTTLKNIEQARPtseiTIEDMKTAVPEVE 148
                 789999*******************998655411124555555553333 PP

>> TPR_MLP1_2  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.5    0.0068       6.1      49      84 ..      21      56 ..      18      93 .. 0.75
   2 ?    5.7   0.4     0.016        14      61      98 ..     104     141 ..      91     157 .. 0.52

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0068
  TPR_MLP1_2 49 lvkhaedvkelqalreelnelkaeiaelkaeaesak 84
                l + a ++ +l+++r++++++ a++ +lk+++ ++ 
  EPX70474.1 21 LKLDAGTASALANFRSRHAQAAAKLGSLKEQLTTVD 56
                667788899999999999999999999999987765 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.016
  TPR_MLP1_2  61 alreelnelkaeiaelkaeaesakaeleeseesweeqk 98 
                 ++++ ++ +k+e+++l + +++ +++  +se  +e  k
  EPX70474.1 104 SAKKNVEMIKTELESLSTTLKNIEQARPTSEITIEDMK 141
                 44444444444444444444444444444444444433 PP

>> HIP1_clath_bdg  Clathrin-binding domain of Huntingtin-interacting protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.1      0.59   5.3e+02       8      58 ..      24      74 ..      20      81 .. 0.65
   2 ?    9.4   1.3    0.0018       1.6      27      91 ..      82     146 ..      65     152 .. 0.81

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.59
  HIP1_clath_bdg  8 nAevtkqlsvarqaqeeverekkeleeelerlkeeaerkleeqkeelekLk 58
                    +A ++  l   r  + + +++   l+e+l  +   + r++ + +e +++++
      EPX70474.1 24 DAGTASALANFRSRHAQAAAKLGSLKEQLTTVDFASYRQVLKNQEIVNRIE 74
                    666666666667777777777777777777777777777766666666655 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.0018
  HIP1_clath_bdg  27 rekkeleeelerlkeeaerkleeqkeelekLkreleakraelarlkssLesseqsgeqlssqlaa 91 
                      +k +l+ +l+++++ + + +   k+++e +k+ele+ ++ l++++++  +se + e++++ + +
      EPX70474.1  82 PVKINLDSQLKAINAFEGKAVGSAKKNVEMIKTELESLSTTLKNIEQARPTSEITIEDMKTAVPE 146
                     56788899999999999999999999999999999999999999999988888888888777665 PP

>> NBD94  Nucleotide-Binding Domain 94 of RH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   4.7    0.0019       1.7       3      88 ..      65     154 ..      63     157 .. 0.75

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.0019
       NBD94   3 Ktknivtkidk....kkkiyeniekllnEleeiekektsl..eevknielsYgrsLikllvqkIdeekkkaenlieeiekyienideikkkl 88 
                 K+++iv++i++     k +  n++  l+ ++  e   + +  ++v+ i+ + + sL++  +++I++ +  +e++ie++++ + ++++i + +
  EPX70474.1  65 KNQEIVNRIESsvtsFKPVKINLDSQLKAINAFEGKAVGSakKNVEMIKTELE-SLST-TLKNIEQARPTSEITIEDMKTAVPEVEKIVETM 154
                 77888888887655577888899999999999998888661134555544443.4554.4689***********************997665 PP

>> CC2-LZ  Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1       1.3   1.2e+03      13      41 ..      42      70 ..      32      97 .. 0.60
   2 ?   10.2   0.7   0.00081      0.73       8      54 ..     108     154 ..     102     157 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 1.3
      CC2-LZ 13 keeieeLkaqlqaaeealaakqeeidelk 41
                 +++ +Lk+ql++ + a  ++  + +e+ 
  EPX70474.1 42 AAKLGSLKEQLTTVDFASYRQVLKNQEIV 70
                55666677777666555544444444444 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00081
      CC2-LZ   8 aekvkkeeieeLkaqlqaaeealaakqeeidelkeeikkkeeeleti 54 
                   ++ k e+e+L++ l++ e+a  +++  i+++k+ + + e+ +et+
  EPX70474.1 108 NVEMIKTELESLSTTLKNIEQARPTSEITIEDMKTAVPEVEKIVETM 154
                 3334499*******************************999999976 PP

>> FlaC_arch  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       4.1   3.6e+03       9      18 ..      45      54 ..      30      72 .. 0.61
   2 ?   -0.7   0.0       2.1   1.9e+03      24      24 ..      67      67 ..      40      83 .. 0.58
   3 ?   -0.8   0.0       2.4   2.1e+03       9      20 ..      70      81 ..      64      97 .. 0.58
   4 ?    9.0   0.8     0.002       1.8       9      35 ..     102     128 ..      86     129 .. 0.73
   5 ?    7.5   3.6    0.0059       5.3       2      45 ..     109     152 ..     108     159 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 4.1
   FlaC_arch  9 lsklstelet 18
                l++l+ +l+t
  EPX70474.1 45 LGSLKEQLTT 54
                2222222222 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 2.1
   FlaC_arch 24 e 24
                +
  EPX70474.1 67 Q 67
                3 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 2.4
   FlaC_arch  9 lsklsteletvk 20
                ++++++++++ k
  EPX70474.1 70 VNRIESSVTSFK 81
                455555555544 PP

  == domain 4  score: 9.0 bits;  conditional E-value: 0.002
   FlaC_arch   9 lsklsteletvkkeneelsksveelke 35 
                 +++ + ++e++k+e+e+ls++++++++
  EPX70474.1 102 VGSAKKNVEMIKTELESLSTTLKNIEQ 128
                 566666778888888888888888776 PP

  == domain 5  score: 7.5 bits;  conditional E-value: 0.0059
   FlaC_arch   2 idelEnklsklsteletvkkeneelsksveelkenVkdllsLYE 45 
                 ++ + ++l++lst+l+++++     + ++e++k  V ++ ++ E
  EPX70474.1 109 VEMIKTELESLSTTLKNIEQARPTSEITIEDMKTAVPEVEKIVE 152
                 56688999999999999999999999999999999988877766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1185  (0.066094); expected 358.6 (0.02)
Passed bias filter:                      656  (0.0365888); expected 358.6 (0.02)
Passed Vit filter:                        99  (0.00552178); expected 17.9 (0.001)
Passed Fwd filter:                        20  (0.00111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              20  [number of targets reported over threshold]
# CPU time: 0.55u 0.29s 00:00:00.84 Elapsed: 00:00:00.46
# Mc/sec: 1141.29
//
Query:       EPX70475.1  [L=207]
Description: HMG-box [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.8e-26   91.0  23.0    4.7e-25   88.6  23.0    2.1  1  Ccdc124        Coiled-coil domain-containing protein 124 /Oxs
  ------ inclusion threshold ------
       0.15   11.9   1.6       0.28   10.9   1.6    1.5  1  DUF4718        Domain of unknown function (DUF4718)
        2.4    6.8   7.8        2.3    6.9   7.8    1.1  1  Presenilin     Presenilin


Domain annotation for each model (and alignments):
>> Ccdc124  Coiled-coil domain-containing protein 124 /Oxs1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.6  23.0   7.8e-29   4.7e-25      11     129 .]      19     178 ..       3     178 .. 0.67

  Alignments for each domain:
  == domain 1  score: 88.6 bits;  conditional E-value: 7.8e-29
     Ccdc124  11 eekkkeeke...........kkekkkakkkeveekeleenvnrlsraeenaeeeekve......................................... 57 
                 ee + ++ke           k         + ++ke ee+  r + a+         +                                         
  EPX70475.1  19 EETELKKKEieenerwskgaK---------SNNKKEQEEEKRR-QAAQ---------Kkaertrleqeemasmpskggkgkkagarkdlsldafleepa 98 
                 222222222222222221111.........1111111111111.1111.........012233333445556667777888999999************ PP

     Ccdc124  58 ......AsgideaiaaLsvk..keekldrhpekrlkAaYkafeeeeLprlkeenpgLrlsQlkqllkkewkkspeNPlNq 129
                       A+++dea++ Ls++  +++k+drhpe+r+k a ++++e++Lp+l++e pgLrl+Q+++++ ke++k+p+NP+N+
  EPX70475.1  99 qpasysARNVDEALDLLSLDsgSKDKIDRHPERRFKPALNEYKETRLPELRKESPGLRLNQYEDIMYKEFQKHPNNPFNK 178
                 *******************54359*******************************************************6 PP

>> DUF4718  Domain of unknown function (DUF4718)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   1.6   4.7e-05      0.28      74     156 ..      39     121 ..       6     134 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 4.7e-05
     DUF4718  74 htGrlqlqeekrkkeeaeikaikdhskeefcladkkviedpeetsvaakssvatlslstlisdsyysqsveaaedwfsddslv 156
                 ++ + + qee++++++a++ka +    +e +   ++   + +++ + ++ s  ++    +   sy ++ v++a d +s ds  
  EPX70475.1  39 KSNNKKEQEEEKRRQAAQKKAERTRLEQEEMASMPSKGGKGKKAGARKDLSLDAFLEEPAQPASYSARNVDEALDLLSLDSGS 121
                 55667789*****************99999999999999999999999999988888889999*************9988854 PP

>> Presenilin  Presenilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   7.8   0.00038       2.3     235     295 ..      10      70 ..       1     157 [. 0.55

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.00038
  Presenilin 235 seeeeeaekkkeeasesskeeeseeesseksaqsseseeeseeesseaessaeesseekes 295
                 ++e+++ +k+++e ++++ ee++++++  ks++++e+eee+++++++++++ ++ ++e+ +
  EPX70475.1  10 KAEAAKGRKEETELKKKEIEENERWSKGAKSNNKKEQEEEKRRQAAQKKAERTRLEQEEMA 70 
                 2222222222222222222222222222222222222222222222222222222222221 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2615  (0.145853); expected 358.6 (0.02)
Passed bias filter:                      889  (0.0495845); expected 358.6 (0.02)
Passed Vit filter:                       166  (0.00925874); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.61u 0.29s 00:00:00.89 Elapsed: 00:00:00.46
# Mc/sec: 1359.77
//
Query:       EPX70476.1  [L=400]
Description: guanyl-nucleotide exchange factor Vps902 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.1e-24   84.0   0.2    1.6e-23   82.9   0.2    1.6  1  VPS9             Vacuolar sorting protein 9 (VPS9) domain
  ------ inclusion threshold ------
      0.037   14.1   0.0       0.09   12.9   0.0    1.7  1  Glyco_transf_8C  Glycosyl transferase family 8 C-terminal


Domain annotation for each model (and alignments):
>> VPS9  Vacuolar sorting protein 9 (VPS9) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.9   0.2   1.7e-27   1.6e-23       2     101 ..     172     269 ..     171     272 .. 0.97

  Alignments for each domain:
  == domain 1  score: 82.9 bits;  conditional E-value: 1.7e-27
        VPS9   2 eqaseeLkklseaksPreKlkcllrtieeiteavskseegeslgaDdlLPiliyviikssppnlysnvqfikrFrsktllegeegYylttleaavefie 100
                 e + e +  l+ +k+P  K+++++++ e+i+ea   + ++e+l+aD+lL+++i++i++   ++l+s+++f+ rFr++++l+ge++Y+ltt+eaa++f+ 
  EPX70476.1 172 ENIAETFFTLNRLKTPLLKMNIFMNVNEKIIEAS--NLPKEELNADNLLNLTIFCILSFHGSQLLSHLNFVLRFRNPDYLSGEQKYCLTTFEAALSFVL 268
                 789999****************************..99***********************************************************98 PP

        VPS9 101 s 101
                 +
  EPX70476.1 269 R 269
                 7 PP

>> Glyco_transf_8C  Glycosyl transferase family 8 C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0     1e-05      0.09      13      49 ..      83     119 ..      81     128 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1e-05
  Glyco_transf_8C  13 aSpWkdvpllppktakemkkkaKhlfkqgkyisgiiw 49 
                      +Sp +dvpll+p+  +  k++ +hl kq++    ii 
       EPX70476.1  83 ESPNHDVPLLSPEEMETQKMAKQHLVKQKDEWMNIIE 119
                      69**************************975544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (400 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       599  (0.0334096); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.44
# Mc/sec: 2736.18
//
Query:       EPX70477.1  [L=1912]
Description: helicase sen1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.4e-98  329.4  25.2    1.8e-52  178.6   6.5    2.5  3  SEN1_N           SEN1 N terminal
    8.8e-72  242.0   3.3    8.8e-72  242.0   3.3    3.3  2  AAA_11           AAA domain
    8.6e-62  208.3   0.0    2.2e-61  206.9   0.0    1.8  1  AAA_12           AAA domain
    2.3e-08   34.5   0.6    1.1e-07   32.3   0.6    2.1  1  AAA_19           AAA domain
    2.4e-08   33.9   0.6    1.4e-05   24.9   0.1    3.0  3  AAA_30           AAA domain
    1.4e-05   24.9   0.3        0.5   10.1   0.0    3.8  3  Viral_helicase1  Viral (Superfamily 1) RNA helicase
  ------ inclusion threshold ------
      0.058   14.2   0.1       0.24   12.2   0.1    2.1  1  RTTN_N           Rotatin, an armadillo repeat protein, centri
      0.074   12.9   0.0       0.17   11.8   0.0    1.7  1  UvrD_C_2         UvrD-like helicase C-terminal domain
      0.096   13.1   0.0       0.28   11.5   0.0    1.8  1  AAA_16           AAA ATPase domain
       0.13   12.2   0.5       0.58   10.1   0.1    2.2  2  RepA_C           Plasmid encoded RepA protein
        1.8    8.5   6.2       0.23   11.4   0.1    2.7  2  ResIII           Type III restriction enzyme, res subunit


Domain annotation for each model (and alignments):
>> SEN1_N  SEN1 N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.6   6.5   1.1e-55   1.8e-52       2     449 ..      76     481 ..      75     488 .. 0.84
   2 !  163.8   3.6   3.4e-51   5.6e-48     505     752 .]     484     733 ..     480     733 .. 0.96
   3 ?   -4.2   0.5       2.1   3.5e+03     499     552 ..    1406    1458 ..    1379    1462 .. 0.75

  Alignments for each domain:
  == domain 1  score: 178.6 bits;  conditional E-value: 1.1e-55
      SEN1_N   2 kerleasLssCdkCvrafhrakkklrqrll..erfpeekvaqffdildeweierilkgLekakellekrgivksssleaslaevllalyeaLccppllr 98 
                 k++l + L+ C++C++++h+  +++++ +l   +f+ ++++++++++ +w+++r++k+L++        +i  + ++++s++++l+a+ye+L+++++l 
  EPX70477.1  76 KKHLGERLQACPSCILSYHQLIDEFKTICLniFNFDSDTLSIVLNKILQWDVSRLKKVLQS--------NI--KVDSSSSSKPILCAFYEILYNVEFL- 163
                 789999***********************644888**************************........22..33555669*****************. PP

      SEN1_N  99 sdpelralfdkvfkslqskkkplklse.llPGltyllfdgdeeerrWAekqlerlkrsptkeefewavsdaleeaiehllrlqdpadsaierfWsglsl 196
                 +++ l+alf+k f     +  +l+ls+ l+PG++yllf  d+++r+WA  +l+  +  +  +ef ++  ++l+e+ +      d  +  +erf +g+s+
  EPX70477.1 164 KNETLFALFRKRF----LEAGFLRLSKkLVPGVIYLLFTNDDALRKWAFGILNG-SDIIPADEFLNLQAPFLQEIRTLNGSTSDEVF--LERFLNGFSV 255
                 *************....34567999889************************88.55555569***********9944444347777..********** PP

      SEN1_N 197 ilrlldkeliteslrgkevnlklesiyrlllnhlssrleeplpdvlralslLLeklgkafWdalspitpqvvldqifdnpaFaklLaeseeseedseed 295
                 +l+++++e++      ++++ + ++ + ++l+ l + + ++ p+ l++l+ LL+++ ++fW+ +s   p++++  +fdn a++ lL+++ e ++d +  
  EPX70477.1 256 LLNSVSSEYF------DTLGKHGFEPVAFVLRGLNKAPLNQYPSYLNCLHSLLRCYRTKFWQ-TSNLEPSHLIRLVFDNMAYKDLLKQVIEGNKDCS-- 345
                 **********......78888899**************************************.68899*********************88877665.. PP

      SEN1_N 296 dseesdllsWirpflrSlspsqrseackkllnfllerlqkdrfstaarearaaclragltalletlltfkdeerslltstsakfvnellnvldlvlkha 394
                     s+ ++Wi +fl+Sls  +  + ++ ll+ +   l++ +    + +  +  ++++ + l++ +++  +++++   s++a +++ + n+    +++ 
  EPX70477.1 346 ----SQTMDWIISFLKSLSLEKHMSIVELLLKKCNVSLNEAEGIAYSSNPFFDSVCEIYSLLFNEYFETVSHSDD---SQKAYVESLQSNI----CSNF 433
                 ....459*************************9999999966655666888889999999999977766666633...3343333333333....3333 PP

      SEN1_N 395 dtivdvalktkpedkanselskaareviekalalDikslaeelekLsagkqeilq 449
                 d++   +l    +d  +   +++  + +e+ l++D+ +l ++++k  ++ +  l+
  EPX70477.1 434 DIFY-SNL----KDYVSPFEQQSFKKAFEYRLNVDVYALRHTYRKYVQKHR--LD 481
                 3333.333....45678899*************************999976..44 PP

  == domain 2  score: 163.8 bits;  conditional E-value: 3.4e-51
      SEN1_N 505 akaafNkalkaireliarllerlsdfsspselkellsdpeaaqalisllfspddelyqaalnllkqafdvdsRldalralleknltatlraindalrql 603
                 + + + +a++++ ++++++l  ++  ++ s lk+ll +p   + l+ +lfsp ++++++a+++++ ++d++  +da+ +l ++ ++ +l++++  ++q+
  EPX70477.1 484 ETNDYDAAVDSFYQFLSNMLIIIQR-WNLSSLKSLLDNPYNYSCLVGFLFSPVSDISNNAWTIMNLTSDAENTADAIDKLAKRRFSDSLQSLSNIYSQW 581
                 5678899******************.88*********************************************************************** PP

      SEN1_N 604 tklktfepaprlvrvlmdildvLcdpsdGlLr..srsltseaeaaalkklWelmwqfLdmiFkrtesWaekyekseMvefcRDtlefaeaLldqyrlfa 700
                 +k+++f++++r++  ++  ++ L+dps+GlL+  s s+ +e++ +alk++W ++w+f +++F   +sW  k ek+++v+ +   l+++++Ll++++ ++
  EPX70477.1 582 IKYRNFNSVKRIIYQGKLFINYLFDPSNGLLHgySISFRDEGNCNALKAYWDNLWKFFAHFFIALPSWPVKKEKDVLVDIMHVSLDCCQMLLKSFHQVS 680
                 ********************************6555668899********************************************************* PP

      SEN1_N 701 salsgasead.steskseseagkkllkalakalkglvkWLRLrDeeLlescvs 752
                 +++sg + +   ++s+++++++k+l +++++ +  l +WL+L+D+ Ll+s+v+
  EPX70477.1 681 EFISGIDISVsFSKSEASDDSKKSLANSILNSFITLSYWLKLNDSTLLSSVVR 733
                 ***9988887767779999*******************************996 PP

  == domain 3  score: -4.2 bits;  conditional E-value: 2.1
      SEN1_N  499 kkeldaakaafNkalkaireliarllerlsdfsspselkellsdpeaaqalisl 552 
                   +e++ +k+a +++l+++r+  +++  ++   ++++   +ll+d +++ a++s+
  EPX70477.1 1406 LREVTRQKNALEQSLDEMRNRHQSANRSMDL-AKKQIQLQLLQDADVVCATLSA 1458
                  3378888999999999999998888888888.6688888999999998888776 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  242.0   3.3   5.4e-75   8.8e-72       3     261 .]    1230    1514 ..    1228    1514 .. 0.87
   2 ?   -3.5   7.6       4.3   7.1e+03     121     185 ..    1824    1893 ..    1740    1904 .. 0.55

  Alignments for each domain:
  == domain 1  score: 242.0 bits;  conditional E-value: 5.4e-75
      AAA_11    3 ndsqreaiksalseseitliqGPPGtgKTktivellsqllsr...........rkseeeksakpriLvCapSNaAvDellerllrglldsegekykp 88  
                  n+ q++ai+ a +++++tl+qGPPGtgKTkti++++ ++l++           +++  ++++k+riLvCapSNaA+De+l+rl +g++d+eg k  p
  EPX70477.1 1230 NEPQAKAIRAASNREGFTLVQGPPGTGKTKTILGMIGAILTSkgqglrfsapgQSKPVQQKQKNRILVCAPSNAAIDEILLRLKDGVYDHEGIKFMP 1326
                  99*************************************944456666666665578899************************************* PP

      AAA_11   89 kivRvgneeeriseavksvsleekvekrlekee...............kaqlakeiskeleklakelrafeeeeek..................ekl 152 
                  k++R+g  e +i+ ++k+++lee++ k++e  +               k             ++++l +++    k                  e +
  EPX70477.1 1327 KVIRIGFTE-SINVHAKEFTLEEQMAKQMEITNlkkheessdsgeirkK-------------HDATLLERN----KlresidsirqagkdsstlELK 1405
                  *********.9******************99766655544443322221.............222222222....2222355556667778888999 PP

      AAA_11  153 kkskekskskleqerrklkkerkelskeleeaeesleeevldeaeivltTlsgagsklleklakkfdvviIDEAaqavEpstliPlrlgakkvvLvG 249 
                  +++ + +k+ leq+++++++  ++ +++++ a+++++ ++l++a++v++Tls +g+++l +++  f +viIDEAaqavE+s+liPl++ +k +++vG
  EPX70477.1 1406 LREVTRQKNALEQSLDEMRNRHQSANRSMDLAKKQIQLQLLQDADVVCATLSASGHETLLNANISFPTVIIDEAAQAVELSSLIPLKFDCKSCIMVG 1502
                  99*********************************************************************************************** PP

      AAA_11  250 DpkQLpatvisk 261 
                  Dp+QLp+tv+sk
  EPX70477.1 1503 DPNQLPPTVLSK 1514
                  **********97 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 4.3
      AAA_11  121 e.....kaqlakeiskeleklakelrafeeeeekeklkkskekskskleqerrklkkerkelskeleeae 185 
                        + +  k+ ske++++ k+++  +++e  +k++ ++ +++++++ ++ k +k+ ++ +k++++ +
  EPX70477.1 1824 VnsdvvNSRTLKDQSKEKKEITKQNETVDSNELPNKREHNFGDKADRKKLKKPKEEKKPDDGHKKSKKSK 1893
                  1333332333333333333333333333333222333333333333333333333333333333333333 PP

>> AAA_12  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  206.9   0.0   1.4e-64   2.2e-61       1     198 [.    1521    1716 ..    1521    1717 .. 0.97

  Alignments for each domain:
  == domain 1  score: 206.9 bits;  conditional E-value: 1.4e-64
      AAA_12    1 lerSlferllkkekekvvlLdtqYRmhpeIsrfpsklfYkgkLkdaesvkkreleaqealeepleplvfidvekseeekekkeksyiNeeEaelvvk 97  
                  +++Sl+ r++k+++ +  lL++qYRmhpeIs+fps++fY++kL d++++++   +  ++ +  +  + f++v ++e+ +++  ks++N  Ea++v+ 
  EPX70477.1 1521 YDQSLYVRMFKRNPDSAYLLSIQYRMHPEISKFPSHYFYQSKLIDGPNMTSVADR-PWHHDALFGVYRFFNVVGKESVSRS--KSLYNADEASFVLL 1614
                  89**********************************************9999999.8999999999******998888886..8************* PP

      AAA_12   98 lvekllkkgsee.erkkigvitpYraqvellkkklkekeeeksekeievntvdgfQGrekdviilslVRsnekkeigflkderrlNValTRAkskli 193 
                  l+ekl +++++   + kig++tpYr+qv+ l+ ++++k+ +   k ++++tvdgfQG+ekd+ii+s+VRs+  + igfl+d rrlNValTRA+s+l+
  EPX70477.1 1615 LYEKLSQNFVNIdFEGKIGIVTPYRSQVQELRYQFQKKFGSIIFKYLDIHTVDGFQGQEKDIIIFSCVRSSMGNGIGFLQDIRRLNVALTRARSSLY 1711
                  **********99888**************************99999*************************************************** PP

      AAA_12  194 ivGnk 198 
                  ivG++
  EPX70477.1 1712 IVGST 1716
                  ***86 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.3   0.6   6.9e-11   1.1e-07       1     143 [.    1233    1509 ..    1233    1511 .. 0.77

  Alignments for each domain:
  == domain 1  score: 32.3 bits;  conditional E-value: 6.9e-11
      AAA_19    1 qreave..alkekvllvtaGpGtGKTrvlkhivallvelggvkp................eeillvaftgrAakelrerlaalgae........... 68  
                  q +a++    +e+  lv ++pGtGKT+++ +++  ++  +g+ +                ++il++a+ + A +e+  rl+    +           
  EPX70477.1 1233 QAKAIRaaSNREGFTLVQGPPGTGKTKTILGMIGAILTSKGQGLrfsapgqskpvqqkqkNRILVCAPSNAAIDEILLRLKDGVYDhegikfmpkvi 1329
                  667775435567899******************9999999888899*********************************966555556777766666 PP

      AAA_19   69 ......atTiHrlal.................................................................................. 77  
                                +                                                                                  
  EPX70477.1 1330 rigfteS-------Invhakeftleeqmakqmeitnlkkheessdsgeirkkhdatllernklresidsirqagkdsstlelklrevtrqknaleqs 1419
                  6666551.......0444445667777778888888889999999999999999999999999********************************** PP

      AAA_19   78 .......................ldfddlltealelle..........eaeeekklqe..ee.llivDEfqdvdelqyrLlkallgekkklllvGDp 138 
                                         l          +ll+           + +e+ l++   + ++i+DE+ +  el  +L+   + + k+ ++vGDp
  EPX70477.1 1420 ldemrnrhqsanrsmdlakkqiqL----------QLLQdadvvcatlsASGHETLLNAniSFpTVIIDEAAQAVELS-SLIPLKF-DCKSCIMVGDP 1504
                  *******99999997666655552..........333344444445543333333333114579*****98776554.5555555.44668****** PP

      AAA_19  139 dQliy 143 
                  +Ql++
  EPX70477.1 1505 NQLPP 1509
                  ***97 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.1   8.8e-09   1.4e-05       3      61 ..    1230    1307 ..    1228    1325 .. 0.82
   2 ?   -0.6   0.2      0.59   9.6e+02     148     179 ..    1403    1433 ..    1391    1446 .. 0.68
   3 !    5.7   0.0    0.0067        11      90     130 ..    1472    1509 ..    1419    1516 .. 0.67

  Alignments for each domain:
  == domain 1  score: 24.9 bits;  conditional E-value: 8.8e-09
      AAA_30    3 naeQaaavealltsgdrvavltGpAGtGKt.talkalreaweaag...................grviglAptgkaAkv 61  
                  n+ Qa+a++a+ + +  +++++Gp+GtGKt t+l+ + ++++++g                    r++++Ap+++a ++
  EPX70477.1 1230 NEPQAKAIRAASNRE-GFTLVQGPPGTGKTkTILGMIGAILTSKGqglrfsapgqskpvqqkqkNRILVCAPSNAAIDE 1307
                  788*****9877666.5*************4455666778888888899999999999998888888899998888665 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.59
      AAA_30  148 taeLtevvRqkeseeraaalalregdaeeale 179 
                    +L+ev+Rqk+ + ++  +++r+ +++++ +
  EPX70477.1 1403 ELKLREVTRQKN-ALEQSLDEMRNRHQSANRS 1433
                  57899*****76.6777777788777774433 PP

  == domain 3  score: 5.7 bits;  conditional E-value: 0.0067
      AAA_30   90 tllivDEagmvdtkqlaallkaaekagakvilvGDerQlas 130 
                    +i+DEa+ +   +l +l+    +   ++i+vGD++Ql++
  EPX70477.1 1472 PTVIIDEAAQA--VELSSLIPLKFD-CKSCIMVGDPNQLPP 1509
                  56899999875..344444444444.568**********97 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.1     0.088   1.4e+02       1      19 [.    1247    1265 ..    1247    1304 .. 0.82
   2 !   10.1   0.0   0.00031       0.5      48     110 ..    1459    1517 ..    1425    1568 .. 0.73
   3 !    8.1   0.0    0.0012         2     167     233 ..    1636    1713 ..    1586    1714 .. 0.72

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.088
  Viral_helicase1    1 ivvhGvpGcGKStlirkll 19  
                       ++v+G pG GK++ i   +
       EPX70477.1 1247 TLVQGPPGTGKTKTILGMI 1265
                       589**********997665 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00031
  Viral_helicase1   48 rtvdsflmalvkstkgkililDEylllhaGyill.laalskaklvilfGDplQipfhsrnasfl 110 
                       ++ +++l+a++   ++ ++i+DE+ ++   ++   +  +  +k +i++GDp+Q p    ++s++
       EPX70477.1 1459 SGHETLLNANI---SFPTVIIDEAAQAV--ELSSlIPLKFDCKSCIMVGDPNQLPPTVLSKSAS 1517
                       55556666655...489*******8876..5666588899*************99765444444 PP

  == domain 3  score: 8.1 bits;  conditional E-value: 0.0012
  Viral_helicase1  167 lvyltftqalkealgvr.........evttvhevqGltfdkVtlvllketdlelis..esrenllvAlTRhrkslvil 233 
                       + y  ++q+l  + + +         +++tv + qG++ d  ++ + +++  + i   ++   l vAlTR+r+sl+i+
       EPX70477.1 1636 TPYRSQVQELRYQFQKKfgsiifkylDIHTVDGFQGQEKDIIIFSCVRSSMGNGIGflQDIRRLNVALTRARSSLYIV 1713
                       44555566666666666777777788899*********99998877755543333377778999***********997 PP

>> RTTN_N  Rotatin, an armadillo repeat protein, centriole functioning
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   0.00015      0.24      25      89 ..     729     793 ..     714     800 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00015
      RTTN_N  25 vkekellkkLlewFnfepvpeeeevLaLllkllkspsaaellkkigavefLsklrknvesklqae 89 
                  +   ++ ++l++Fn  ++p +++++++++k ++ + ++++l+    ++++  +++ + ++lq++
  EPX70477.1 729 SSVVRIICAMLKLFNNLSLPINQNTVDMIQKSSTAEDGSTILALSEREDLFLAISPYLPEHLQTK 793
                 555678899**************************************************999987 PP

>> UvrD_C_2  UvrD-like helicase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0    0.0001      0.17       5      52 .]    1664    1713 ..    1660    1713 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.0001
    UvrD_C_2    5 ltihkaQGsefpaVivfdpdlaaarmgel.....rrrlLYtavTRAreklilv 52  
                   t+  +QG+e +++i+      +++++         r L +a+TRAr  l++v
  EPX70477.1 1664 HTVDGFQGQEKDIIIF--SCVRSSMGN-GigflqDIRRLNVALTRARSSLYIV 1713
                  69999**********9..444443322.246667*****************98 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00017      0.28      18      42 ..    1238    1263 ..    1233    1322 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00017
      AAA_16   18 rvrsgrpelvllsGesGvGKsslv.r 42  
                  r++s+r++ +l+ G++G+GK++ +  
  EPX70477.1 1238 RAASNREGFTLVQGPPGTGKTKTIlG 1263
                  5778889**************98734 PP

>> RepA_C  Plasmid encoded RepA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1       1.9   3.1e+03     111     150 ..     434     474 ..     410     480 .. 0.79
   2 ?   10.1   0.1   0.00036      0.58      72     146 ..     699     771 ..     675     776 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 1.9
      RepA_C 111 eaffkhlaehpvPidevalrelkktptslDiyiy.Layrly 150
                 + f+++l++   P +++ +++  +    +D+y    +yr+y
  EPX70477.1 434 DIFYSNLKDYVSPFEQQSFKKAFEYRLNVDVYALrHTYRKY 474
                 579**************999999989999999752466655 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00036
      RepA_C  72 edaeslgdektailedkilfederdseqgslfeselvlseaffkhlaehpvPidevalrelkktptslDiyiyLa 146
                 +d  s +  +++il++ i+ ++  +++ ++l+ s +++  a+ k + + ++Pi+++++  ++k++t+ D  + La
  EPX70477.1 699 DD--SKKSLANSILNSFITLSYWLKLNDSTLLSSVVRIICAMLKLFNNLSLPINQNTVDMIQKSSTAEDGSTILA 771
                 22..22466789******************************************************998777666 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   0.00014      0.23       6      84 ..    1231    1351 ..    1226    1484 .. 0.67
   2 ?   -4.3   2.1       9.9   1.6e+04      62      88 ..    1830    1856 ..    1807    1898 .. 0.48

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00014
                  HHHHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S.......................-EEEEESSHHHHHHHHHHG.......... CS
      ResIII    6 eyQeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkee..................kflflvprkslleqtleef.......... 74  
                  e Q++ai++       +r+   l++ + GtGKT +++ +i ++l+++++                   ++l+ +p+++ ++  l ++          
  EPX70477.1 1231 EPQAKAIRAAS-----NREGFTLVQGPPGTGKTKTILGMIGAILTSKGQGlrfsapgqskpvqqkqknRILVCAPSNAAIDEILLRLkdgvydhegi 1322
                  66777777775.....8899999*******************9999887677777777777777777777777777754444443333333455554 PP

                  ...................GGGTGG.... CS
      ResIII   75 ...................kkflseayke 84  
                                     k+f+ e++++
  EPX70477.1 1323 kfmpkvirigftesinvhaKEFTLEEQMA 1351
                  44444444444444444443333333333 PP

  == domain 2  score: -4.3 bits;  conditional E-value: 9.9
                  SSHHHHHHHHHHGGGGTGG....GEEE CS
      ResIII   62 prkslleqtleefkkflseaykeigkk 88  
                  ++++l +q +e+ + ++++++ + ++ 
  EPX70477.1 1830 NSRTLKDQSKEKKEITKQNETVDSNEL 1856
                  444444444433322222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1912 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1634  (0.0911373); expected 358.6 (0.02)
Passed bias filter:                      473  (0.0263818); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 1.36u 0.39s 00:00:01.75 Elapsed: 00:00:00.61
# Mc/sec: 9389.83
//
Query:       EPX70478.1  [L=458]
Description: 1,3-beta-glucanosyltransferase Gas2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   2.9e-126  421.0   8.2   3.5e-126  420.7   8.2    1.0  1  Glyco_hydro_72  Glucanosyltransferase
    1.5e-13   51.2   2.2    3.8e-13   49.9   2.2    1.8  1  X8              X8 domain


Domain annotation for each model (and alignments):
>> Glyco_hydro_72  Glucanosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  420.7   8.2    4e-130  3.5e-126       7     314 ..      18     330 ..      12     331 .. 0.96

  Alignments for each domain:
  == domain 1  score: 420.7 bits;  conditional E-value: 4e-130
                     TTS--EEEETTEEEETTT-BBE-EEEEE--BE-----.-SSB-GGG-HH..HHHHHHHHHHHHT-SEEEES---TTS--HHHHHHHHHTT-EEEE CS
  Glyco_hydro_72   7 eaveaieikgnkffdsksgeqfyikGvdyqpggseev.sslvdpladae..aCkrdikllkelgvntvrvyavdnskdhdeCmkalsdagiyvil 98 
                      a+e++++kg+kff  ++++qfyikGv+yqp+ ++e  ++++dplada   +C++d+kl+++lg+nt+rvy+v++s+dhd+Cm+a+++++iyv+l
      EPX70478.1  18 FALEPLTVKGRKFF--QNDTQFYIKGVAYQPKVNAEFtTTVIDPLADAAnkNCSEDAKLIRNLGANTIRVYSVNASLDHDKCMNAFKNESIYVFL 110
                     5789**********..999*************9996548999****985459******************************************* PP

                     ES-BTTBS--TTS-..---HHHHHHHHHHHHHHTT-TTEEEEEEEESSS-STT-GGGHHHHHHHHHHHHHHHHHSSS----EEEEE---TTTHHH CS
  Glyco_hydro_72  99 dlnepkesinradpassynedllervfkvidafkeyknvlgffaGnevvndksntaasayvkavvrdvkeyikkkkerkiPvGysaaddaelrve 193
                     d+++p++ i+r+dp  ++++++++ +++v+d f++y+n+ gf+aGnevvn++sn  ++ayv+ ++rd+k+yik+kk+r+iPvGy++ad+ ++r e
      EPX70478.1 111 DVANPSTGIDRTDP--TWTTTQYDAYKQVVDVFSKYNNTAGFLAGNEVVNNASNVPSAAYVRSAIRDLKSYIKSKKYRSIPVGYAGADIPDIRNE 203
                     **************..******************************************************************************* PP

                     HHHHTTBTT-........--S-EEEEE----SS--HHHHSHHHHHHHHTT-SS-EEEEEE---SSSS---THHHHHTSHHHHTTEEEEEES-SB- CS
  Glyco_hydro_72 194 laeylaCgded......dkadffglnmyeWCgkssfktsGydertkefenysiPlflseyGCnkvtprkftevealyseemtsvfsGGlvyeyse 282
                     la+yl+C++++       +adf+g+n+yeWCg+s+f++sGy++rt+e++n+++P+f+se+GCn ++pr+f+ev+a+ys++mt+v+sGG+vye+se
      EPX70478.1 204 LAAYLTCNATNtpqdnaTEADFLGYNNYEWCGNSNFYASGYAARTNELQNITVPIFFSEFGCNIISPRTFSEVQAIYSKNMTDVWSGGIVYEFSE 298
                     ********98888887669**************************************************************************** PP

                     -SSS--SEEE-TTS-EEE-THHHHHHHHHHH- CS
  Glyco_hydro_72 283 eannyGlvkiddddvkkllkdfenlkseykki 314
                     e n yGlv+i +++++ + +df nl+++++++
      EPX70478.1 299 EVNGYGLVNITSTGERVKNADFGNLQKQWASV 330
                     *****************************987 PP

>> X8  X8 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.9   2.2   4.3e-17   3.8e-13       2      75 ..     382     455 ..     381     456 .. 0.92

  Alignments for each domain:
  == domain 1  score: 49.9 bits;  conditional E-value: 4.3e-17
                 EEEE-TTS-HHHHHHHHHHHTTTSS..SSTT---SS.....S-SS--TTHHHHHHHHHHHHHHTSSGGG--S-SSE CS
          X8   2 wCvvkdsvdeeelgdlldyaCgead..CtaiqangttGkYGcyspcsvkqklsyalnsYYqkqgkkssaCdFsgsa 75 
                  C v+ + + +++g+ l+ +C + +  C++i+++  +G+YG++s c+ kq+ls+al++Y +++   ++aC+++g +
  EPX70478.1 382 HCSVQGEPKGSKIGQVLGELCYYDQeaCADISSDPYNGHYGKFSGCTGKQQLSFALDAYTKHH--GDEACSWGGVG 455
                 7**********************4446********************************9998..679****9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (458 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       415  (0.0231469); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.70u 0.33s 00:00:01.03 Elapsed: 00:00:00.57
# Mc/sec: 2434.81
//
Query:       EPX70479.1  [L=424]
Description: CAF1 family ribonuclease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.9e-63  213.6   3.3    4.7e-63  213.3   3.3    1.1  1  CAF1            CAF1 family ribonuclease
    0.00067   19.4   0.1       0.53   10.0   0.0    2.7  3  DNA_pol_A_exo1  3'-5' exonuclease
  ------ inclusion threshold ------
      0.068   13.3   0.1        7.4    6.6   0.2    2.3  2  ApoLp-III       Apolipophorin-III precursor (apoLp-III)


Domain annotation for each model (and alignments):
>> CAF1  CAF1 family ribonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  213.3   3.3   7.8e-67   4.7e-63       1     319 []       3     397 ..       3     397 .. 0.79

  Alignments for each domain:
  == domain 1  score: 213.3 bits;  conditional E-value: 7.8e-67
                 E-GGGHHHHHHHHHHHHHH-SEEEEEEEES-S......S-----------HHHHHHHHHHHTTTB-EEEEEEEEEEEETTTTE..EEEEEEEEEB---- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        CAF1   1 VtrsNfkellpeilkaikeasFvAiDlEftGl......segerkesladsleerYeklkqaaesfsilqlGlscfsedkekkekeykvqpynfylfpke 93 
                 V+ +Nf++ +++++++i++a ++AiD+Ef+Gl      +++++ ++++ s+  ++e l+++a ++silq+Gl+++s +k+       + py+f l p +
  EPX70479.1   3 VNGDNFAREFSSLQNEIENAAYIAIDCEFSGLlgkikdNQNSTMNENYISFIGQFEGLRESALKYSILQIGLTFISFTKDGL---ASCTPYTFNLTPLT 98 
                 889****************************9899887777778888888889**********************9999996...5899********99 PP

                 S...S---EEEEEHHHHHHHHHTT--HHHHHTT-B-B--HHHHHHHHCH----.-.....---...............-----TTC.HHHHHH...... CS
                 x...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxx...............xxxxxxxxxxxxxxx...... RF
        CAF1  94 e...dldrefsvspsslqFLakngfdfnkliseGipYlsrkeeekakerleer.keekekske...............nvkivsdedkefvee...... 167
                 +    + r++++++s+l+FL ++gfdf+k++++G+pYlsr ee+ + +  +++ k eke  +                +             +      
  EPX70479.1  99 DtnlFFRRDYCIETSTLAFLLRHGFDFQKQLDKGVPYLSRTEESYLYKLTKHKfKPEKEFISLdataqslvretkaqiE-------------Kwrselg 184
                 89999************************************99999666666564444333224544444444444440.............2555555 PP

                 ............................................................-S.HHHHHHHHHHHHHHHHHHHHHHSBTHHHHHHHHHC- CS
                 ............................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        CAF1 168 ............................................................kskeeeelkeeeklkeeeeekiakqsgfrlvfealvksr 206
                                                                                 ++  ++++++ e+  + +++++gfr++++ l+++r
  EPX70479.1 185 kegacnylnvdtsnryyqkavhnlvesqyndlqsvsknsfvqirvseshnsrtserqnpgA---DSIDSRKRTFYEKSVQLLDEAVGFRKLWDYLLSKR 280
                 5566666666666666666666677777888888888888888888877765554432210...1111234445558999999999************* PP

                 -EEEESSTHHHHHHHHHHHT----SSHHHHHHHHHHH-SSEEEHHHHHT...STTTTTT-S--SHHHHHHHTTSTTS--.......--EEE-TTS-.-- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xx RF
        CAF1 207 kpiVgHNgllDllflyqtfyaeLPesleeFkaklselFPgiiDtKylak...neelearleassLeelfeklkkenskskdassseekkesekkka.as 301
                 k iV HNgl Dl++l++ f + LPe++++Fk+ l+  F ++ DtK+l +   + +    +++s+L+ l+ek+   + +s++  s+ ++ +    +    
  EPX70479.1 281 KRIVCHNGLADLMYLFSVFEGTLPETYNDFKSLLHTSFSSVHDTKVLYSkspDLQHVIDNGSSNLQALVEKVLVLSTESSRLCSRLSSLDRGPYSImMI 379
                 ************************************************987755556777999********9777666655554444444444443366 PP

                 ------HHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxx RF
        CAF1 302 eesaHeAGyDafmTGlvf 319
                 ++++HeAG Da+ T+++f
  EPX70479.1 380 TKNSHEAGKDAYDTAIAF 397
                 777************988 PP

>> DNA_pol_A_exo1  3'-5' exonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.2   0.0    0.0012       7.4       9      32 ..      11      34 ..       8      42 .. 0.89
   2 ?   -2.0   0.0      0.43   2.6e+03     119     156 ..     159     191 ..     141     199 .. 0.63
   3 !   10.0   0.0   8.8e-05      0.53      66     154 ..     269     378 ..     233     397 .. 0.80

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0012
                    HHHHHHHHHTTSSEEEEEEEEE-S CS
  DNA_pol_A_exo1  9 eleelieelknlkvvavDtEttsl 32
                    e+++l +e++n+ ++a+D+E+++l
      EPX70479.1 11 EFSSLQNEIENAAYIAIDCEFSGL 34
                    67788999*************987 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.43
                     SSHHHHHHHHHSB---GHCCTTSSTTTSSS-HHHHHHH CS
  DNA_pol_A_exo1 119 hsLdsLaekylgdleldkeeqiakwqkarplleeqllY 156
                     +sLd  a+++++    + + qi+kw+  +   e +++Y
      EPX70479.1 159 ISLDATAQSLVR----ETKAQIEKWR-SELGKEGACNY 191
                     777777777777....4566777777.55544444444 PP

  == domain 3  score: 10.0 bits;  conditional E-value: 8.8e-05
                     GHHHHHHHT-TTSEEEESSHHHHHHHHHHH...........HTS--SSEEEHHHHHHHTTHSTT..........SSHHHHHHHHHSB---GHCCT CS
  DNA_pol_A_exo1  66 lealkrlledenitkvghnakfDlevlard...........fgielenlfdtmlaayvldyers..........hsLdsLaekylgdleldkeeq 139
                     +++l   l ++   +v hn   Dl +l  +           f+  l   f  + +++vl  ++            +L+ L+ek+l  l ++ + +
      EPX70479.1 269 FRKLWDYLLSKRKRIVCHNGLADLMYLFSVfegtlpetyndFKSLLHTSFSSVHDTKVLYSKSPdlqhvidngsSNLQALVEKVLV-LSTESSRL 362
                     55566667778889****************999999999997777777777777777776666677788*****************.******** PP

                     TSSTTT.SSS-HHHHH CS
  DNA_pol_A_exo1 140 iakwqk.arplleeql 154
                     +++ ++ +r ++  ++
      EPX70479.1 363 CSRLSSlDRGPYSIMM 378
                     ***9998777777766 PP

>> ApoLp-III  Apolipophorin-III precursor (apoLp-III)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.2    0.0012       7.4      55     114 ..     164     223 ..     141     226 .. 0.90
   2 ?    4.0   0.0     0.008        48      58     112 ..     305     368 ..     294     395 .. 0.72

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0012
   ApoLp-III  55 eleealkevkkkieetadklseenPevkkkaqelqekvQsgvqslvkesqklaeslkens 114
                 +++++++e+k++ie+ + +l +e +    +++  +   Q++v +lv++  +  +s+++ns
  EPX70479.1 164 TAQSLVRETKAQIEKWRSELGKEGACNYLNVDTSNRYYQKAVHNLVESQYNDLQSVSKNS 223
                 68899*****************999999******************99888888888876 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.008
   ApoLp-III  58 ealkevkkkieetadklse......enPevkkkaqelqekvQsgvqslv...kesqklaeslke 112
                 e+ +++k+ +   + ++        ++P+++  +++ ++++Q+ v++++   +es  l ++l++
  EPX70479.1 305 ETYNDFKSLLHTSFSSVHDtkvlysKSPDLQHVIDNGSSNLQALVEKVLvlsTESSRLCSRLSS 368
                 555555555555555554444555589***************9888754233788888777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (424 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       829  (0.0462379); expected 358.6 (0.02)
Passed bias filter:                      528  (0.0294495); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.71u 0.35s 00:00:01.06 Elapsed: 00:00:00.56
# Mc/sec: 2284.22
//
Query:       EPX70480.1  [L=1242]
Description: nucleoporin Pom152 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.056   13.8   0.5         32    4.9   0.0    3.6  3  DUF3910   Protein of unknown function (DUF3910)


Domain annotation for each model (and alignments):
>> DUF3910  Protein of unknown function (DUF3910)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.1     0.046   8.3e+02       7      71 ..     296     364 ..     292     380 .. 0.65
   2 ?    3.6   0.0    0.0047        84      35      87 ..     592     646 ..     565     650 .. 0.77
   3 ?    4.9   0.0    0.0018        32      55      86 ..     977    1008 ..     956    1014 .. 0.80

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.046
     DUF3910   7 vdwigtpk.ayiyk..ddvtydataidfslekddnryklivlkheedl.qyklvkygvkpgsqkpfpid 71 
                 +d ig p     yk  d   +++ +id  + kd   + l++  + +d+  yk ++      s+  +pi 
  EPX70480.1 296 LDVIGVPPlKLSYKtwDGKQFNTYSIDSVVPKDYRLHPLMLSSNPKDIaFYKGLDVEYAKSSEVQIPIS 364
                 57788764134466669999*******998888766666666555554146765554444555555554 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.0047
     DUF3910  35 kddnryklivlkhee.dlqyklvkygvkpgsqkpfpi.dipfkdemlpliekilq 87 
                 k   +yk ++l  e+ +  yk +        q  fp+ d  f+++++  + +i++
  EPX70480.1 592 KKSGKYKYVILGVEDaNYGYKELTGSAYNKEQTVFPLaDATFEENTNGEMSSIVK 646
                 456799*9999865427889*9999999999*****75889*9999988888776 PP

  == domain 3  score: 4.9 bits;  conditional E-value: 0.0018
     DUF3910   55 lvkygvkpgsqkpfpidipfkdemlpliekil 86  
                    + gv+   + pf +d + k+em   ++ki 
  EPX70480.1  977 EQQIGVRLNGKGPFAMDFEIKNEMTGAVNKIT 1008
                  458899999********************995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1242 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       445  (0.0248201); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.93u 0.35s 00:00:01.28 Elapsed: 00:00:00.56
# Mc/sec: 6630.48
//
Query:       EPX70481.1  [L=295]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-44  151.9   2.8    3.3e-44  151.5   2.8    1.2  1  ELYS      Nuclear pore complex assembly


Domain annotation for each model (and alignments):
>> ELYS  Nuclear pore complex assembly
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.5   2.8   1.8e-48   3.3e-44       1     218 [.      43     246 ..      43     248 .. 0.94

  Alignments for each domain:
  == domain 1  score: 151.5 bits;  conditional E-value: 1.8e-48
        ELYS   1 kLFiDrllsala.iqkdsgeaaklYPPkslqalrdlllqigsssevdllaKqslllYlLlDldasseeselaedFaaafglprklvllvqglwlLDhge 98 
                 +LF+D l+  +  +++    ++++YPP+s+++l++l+l i s s++d+l++q++ +YlL+D+        ++e++a+++ lp ++++l++g+++LDh +
  EPX70481.1  43 QLFFDVLFFFIDaMKE----PEGCYPPSSMSDLKNLFLIIDS-SNIDELKQQCFYYYLLKDW-------GKSETYADQILLPYNFRHLIDGYYALDHLN 129
                 69******98776666....99****************6666.9*****************9.......679*************************** PP

        ELYS  99 feealelLtdPslspkefadkilqvLlergdaslalaylravkpplssseavealfvllargsvteAfsfqRslsdkekreelleelvelclee.aark 196
                 feeal+++++P + p +f+dkil++++++++  ++++++  v+ppl++  ++e+++ +lar s+  Af+f +++  +    +l+e+l+ ++l++ ++++
  EPX70481.1 130 FEEALDHFLQPDVLP-NFPDKILETFYRHDKFFQMIRFIMFVNPPLDTFRKQECYTLALARVSFLSAFHFMKKSIHP---LVLWEKLLYVVLDSnDKDS 224
                 **************9.********************************************************99999...7************976688 PP

        ELYS 197 lkeLlelpldeeEekllekfLl 218
                 +k +++lpl eeE +++ ++L 
  EPX70481.1 225 CKLIVSLPLVEEEIDIMISVLN 246
                 8************999988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (295 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       370  (0.020637); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.47
# Mc/sec: 1902.59
//
Query:       EPX70482.1  [L=572]
Description: exonuclease I Exo1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.9e-31  106.2   0.0    2.1e-30  105.2   0.0    1.6  1  XPG_N     XPG N-terminal domain
    1.2e-20   73.6   0.1    3.2e-20   72.3   0.1    1.8  1  XPG_I     XPG I-region
  ------ inclusion threshold ------
      0.031   13.7   0.9      0.074   12.5   0.0    1.9  2  XPG_I_2   XPG domain containing


Domain annotation for each model (and alignments):
>> XPG_N  XPG N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.2   0.0   3.5e-34   2.1e-30       1     101 []       1      99 [.       1      99 [. 0.99

  Alignments for each domain:
  == domain 1  score: 105.2 bits;  conditional E-value: 3.5e-34
                 X--TTHHHHHHHH-GEEEEEGGGGTTEEEEEEHHHHHHHHHHHSE.ETTEE-BS-HHHHHHHHHHHHHHHTTEEEEEEE--S--GGGHHHHHHHHHHHH CS
       XPG_N   1 MGikgLlkllkevaairsvsiealegkklaiDaslwlyrfliavreqlgnalentshlmglfsrllrlldfgikPifVFdgkapdlkkeelekrserrq 99 
                 MGikgLl +lk ++   ++++e+++gk+l++D+++wl++ +++++++l+ ++ ++++++++++++l+l+++g+kPi+VFdg+++++k+ +++kr+err+
  EPX70482.1   1 MGIKGLLGFLKSSQ--TPSHVEEFSGKTLGVDGYVWLHKGVFTCAHELALQKDTDKYIKYAVHQALMLQYYGVKPIIVFDGGPLPCKAPTEQKRKERRE 97 
                 **************..**********************************************************************************9 PP

                 HH CS
       XPG_N 100 ea 101
                 ea
  EPX70482.1  98 EA 99 
                 85 PP

>> XPG_I  XPG I-region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.3   0.1   5.4e-24   3.2e-20       2      94 .]     139     226 ..     138     226 .. 0.80

  Alignments for each domain:
  == domain 1  score: 72.3 bits;  conditional E-value: 5.4e-24
                 HHT--EEE-SS-HHHHHHHHHHTTSSSEEE-SSSHHHHTT-SEEEESTT.ECECTT..EEECEEEEEEHHHHHHHHT.--HHHHHHHHHHHCET CS
       XPG_I   2 lmgipyvvApgEAEAqcayLqkkglvdaviseDsDlllFGapkvlrnlskkkskkkkekekkkvevidlekvlkelg.ltreqlidlaillgcD 94 
                   gi  +vAp+EA++q++yL+k++++d++i+eDsD+l+FGa++vl ++  ++ +  k +++   + ++ ++v   l+ l++e++++++il+gcD
  EPX70482.1 139 EHGILSIVAPYEADSQLVYLEKEKIIDGIITEDSDMLVFGAKRVLFKMD-SFGNCVKIQRE---DLFKKQEV--DLRlLSDEKFRHMSILSGCD 226
                 579999******************************************6.77665533322...23333222..233379*************9 PP

>> XPG_I_2  XPG domain containing
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.2e-05     0.074       5      60 ..     129     180 ..     125     221 .. 0.82
   2 ?   -1.2   0.2      0.19   1.2e+03     133     200 ..     411     479 ..     394     498 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.2e-05
     XPG_I_2   5 mvpavieaLknrwkakditevvpgEADkfcAvlA.rklgcaVLTsDSDLlvhdlgee 60 
                 m   vi aLk   + +   +v p EAD +  +l  +k  + + T+DSD+lv+  g++
  EPX70482.1 129 MAAKVIAALK---EHGILSIVAPYEADSQLVYLEkEKIIDGIITEDSDMLVF--GAK 180
                 6677888898...677888999***********97888999**********9..444 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.19
     XPG_I_2 133 vaeksseyvaflkeye.essevksatsanalqlldprvseLllqleqaaafnkeeeapevYlpflvedh 200
                 v+ +++e+++ ++  + + s++k +++ + ++   + vs L++++e+ + f+++   ++++ + + ++ 
  EPX70482.1 411 VQNNENEVDHVISPQKeSLSQTKTSSEPRRFEKSLSDVSHLVRKTENIPPFSAPGGTSKYFSQKKPDKV 479
                 667777777777777757778888888889999999999999999998888888887777777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (572 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       705  (0.0393218); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 4110.53
//
Query:       EPX70483.1  [L=1230]
Description: mitotic cohesin complex subunit Psm1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      4e-65  219.3   0.0    6.1e-65  218.7   0.0    1.4  1  SMC_N            RecF/RecN/SMC N terminal domain
    1.2e-30  106.2   1.9    1.7e-28   99.3   0.0    2.9  2  SMC_hinge        SMC proteins Flexible Hinge Domain
    6.4e-13   49.2  19.2    9.3e-08   32.2   0.5    4.5  2  AAA_21           AAA domain, putative AbiEii toxin, Type IV T
    6.6e-10   39.8  25.2    6.6e-10   39.8  25.2    6.5  4  AAA_23           AAA domain
    4.1e-09   36.6  11.9    4.1e-09   36.6  11.9    5.1  1  AAA_15           AAA ATPase domain
    8.3e-08   31.9   0.0    2.1e-07   30.6   0.0    1.7  1  AAA_29           P-loop containing region of AAA domain
  ------ inclusion threshold ------
      0.017   14.9   0.2      0.017   14.9   0.2    2.8  2  YqgF             Holliday-junction resolvase-like of SPT6
      0.022   15.0   0.0      0.067   13.4   0.0    1.9  1  SbcCD_C          Putative exonuclease SbcCD, C subunit
      0.063   13.6   2.0         28    5.0   0.0    4.4  3  AAA_22           AAA domain
       0.19   11.6   0.0        1.1    9.2   0.0    2.2  2  DUF1482          Protein of unknown function (DUF1482)
        0.2   12.1   0.0        0.2   12.1   0.0    6.3  2  ABC_tran         ABC transporter
       0.43   10.3   9.3        5.9    6.6   0.0    3.1  3  DEAD             DEAD/DEAH box helicase
       0.63   10.0   5.4        4.3    7.4   0.1    3.2  2  Sugarporin_N     Maltoporin periplasmic N-terminal extension


Domain annotation for each model (and alignments):
>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  218.7   0.0   4.4e-68   6.1e-65       2     218 ..       4    1216 ..       3    1218 .. 0.99

  Alignments for each domain:
  == domain 1  score: 218.7 bits;  conditional E-value: 4.4e-68
                  EEEEEEESETTEECEEEEEETTSSEEEEEESTTSSHHHHHHHHHHHCTT.TTTTTTCHCCCCCC--...........BTTCSSTTEEEEEEEEEETT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...........xxxxxxxxxxxxxxxxxxxx RF
       SMC_N    2 lkrleienFksyagktvilpfsksftaivGpNGSGKsnlldAilFvLGersakklrseklsdlihk...........skekasvkkaeveitfdned 87  
                  l rle+enFksy+g ++i+pf++ ft+++GpNGSGKsnl+dAi+FvLG +s+ +lrs+++++li++            ++++   +a+v+++++ +d
  EPX70483.1    4 LLRLEVENFKSYRGCQTIGPFED-FTSVIGPNGSGKSNLMDAISFVLGVKSS-HLRSSNIRELIYRgrvmnsqgsasFDDSETPRSAYVKLVYELDD 98  
                  5689*****************99.************************9888.************99998877766666777889999999998888 PP

                  EESSSSSSCEEEEEEEETTSEEEEEETTEEE-HHHHHHHHHCTT-STT................................................. CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................................................. RF
       SMC_N   88 kklkiekeevsisrrvkrkgeseykingkevtkkevsellesagiske................................................. 135 
                   +      e + +r +  +g +ey+in+k  +++e+ + le+++i                                                    
  EPX70483.1   99 GE------EREYKRVITPNGGTEYRINDKPTQFSEYCKSLEEQNILVRarnflvfqgdveaiasqspadlsrlieqicgsleykgdyekykqeqnya 189 
                  87......78899************************************************************************************ PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX70483.1  190 vnlsahsfnkkrginaeikqyqeqkaeaeiyesrkeqrdiaslifllwkmyhieksidsnrkdienfknsaneltkrqetssakvdslreqegaihr 286 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX70483.1  287 qlllfdrnvckqekfiaskrpelislaekasessvnlqkiqrkvgevekdyasqsstlqmlenqlaslivaeeqltrnihereeqrghklspedqkd 383 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX70483.1  384 ydnlrnqadlqnsktltqlqslnrkvkvasqaknalaeivedlktrklqfkelinslieekdaliaevnrrieelesvrqsiqqkranyshycqqer 480 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX70483.1  481 dlndelhtclqklleanadrnesnqdikkrealyalkriypgvkgrvidlcsptqkkyesaliaalgknfdaivvgsqatakecidyireqrigvmt 577 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX70483.1  578 flpmdtvavkpvnqsfrgthagarlaidvvnfepqyervivsalgntlicdnlniardlsyskhanaktvtlegtvihktglitggssntrsakrwd 674 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX70483.1  675 dreieqlkqtqnnlmaqidriqseklaslvveqdtinlhnleselslvkeslnvklrsledkqkeldyfnglygqkkpelesserelsemeesqakq 771 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX70483.1  772 lqqihivedkvfanfckrtkitnirsyeelqrsftqqysqkqiefanqkallenrigferqrtsdievrlnrlkdfirkdeqsikdyeqkhealete 868 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX70483.1  869 vataeaeldllreeysetrskndevlrtisqhkleskrflaeitklkndvtlteseierfasdwhaivrkckledislplssgslsnipiddfgtet 965 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX70483.1  966 etmdidssdqnvqatfnkfgievdydelddelkedgsesmgavlqeklreyneelekmspnmkamerleiveqrlsrlddefgdarksakdakerfn 1062
                  ************************************************************************************************* PP

                  ......................................................................CS-HHHHHHHHHHHHHHHHCCS--SEE CS
                  ......................................................................xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  136 ......................................................................lLSgGektLvalaLlfAiqkvkpaply 162 
                                                                                        +LSgGekt++alaLlfAi++++pap++
  EPX70483.1 1063 kvkeqrlkkfyeafnhiseqidpiykeltkspafplggtgyltlddsdepylggvrfhamppmkrfrdmdQLSGGEKTMAALALLFAIHSYQPAPFF 1159
                  ************************************************************************************************* PP

                  EECTTTTTS-HHHHHHHHHHHHHHCTT.SEEEEE-SSHHHCCC-SCEEEEEEEETTE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  163 llDeidaaLDeknvkkvaellkekskn.aQfivislreemlekadklvgvtkvengv 218 
                  +lDeidaaLD++nv+k+a++++++ ++ +Qf+visl++++++k+++lvg++  +++ 
  EPX70483.1 1160 VLDEIDAALDQTNVSKIANYIRQHASSgFQFVVISLKNQLFSKSEALVGIYRDQEQN 1216
                  **********************887666***********************977665 PP

>> SMC_hinge  SMC proteins Flexible Hinge Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.4     0.018        24      24     103 ..     345     425 ..     329     427 .. 0.83
   2 !   99.3   0.0   1.2e-31   1.7e-28       2     116 ..     521     636 ..     520     637 .. 0.95

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.018
   SMC_hinge  24 aalgnrlqalvvedeetakkiieflkkknagratflpldrikqknkadgandkns....gavplidlvevddelrkalryllgd 103
                 + l+n+l +l+v  e+  + i e  +++ ++   + p d+ + +n +++a+ +ns    + ++l   v+v ++ ++al +++ d
  EPX70483.1 345 QMLENQLASLIVAEEQLTRNIHEREEQR-GH--KLSPEDQKDYDNLRNQADLQNSktltQLQSLNRKVKVASQAKNALAEIVED 425
                 68999*******9999998876544444.55..599*************************************99999998876 PP

  == domain 2  score: 99.3 bits;  conditional E-value: 1.2e-31
   SMC_hinge   2 kgvlGrladlievd.egyekAveaalgnrlqalvvedeetakkiieflkkknagratflpldrikqknkadgandknsgavplidlvevddelrkalry 99 
                 +gv Gr++dl++++ ++ye A+ aalg++ +a+vv +++tak++i+++++++ g +tflp+d++  k+ + + +  ++ga+ +id+v++++++++++  
  EPX70483.1 521 PGVKGRVIDLCSPTqKKYESALIAALGKNFDAIVVGSQATAKECIDYIREQRIGVMTFLPMDTVAVKPVNQSFRGTHAGARLAIDVVNFEPQYERVIVS 619
                 689************************************************************888877777777777********************* PP

   SMC_hinge 100 llgdtlvvdsldeAeel 116
                 +lg+tl++d+l  A++l
  EPX70483.1 620 ALGNTLICDNLNIARDL 636
                 **************997 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.2   0.5   6.7e-11   9.3e-08       1      63 [.      27      82 ..      27     263 .. 0.76
   2 !   15.8  12.5   6.9e-06    0.0096     192     296 ..    1040    1194 ..     635    1194 .. 0.82

  Alignments for each domain:
  == domain 1  score: 32.2 bits;  conditional E-value: 6.7e-11
      AAA_21  1 lnvliGpNgsGKSnLLdaldllarldrdvegltdelsggggirkipslldlydpeipfefeie 63
                ++ +iGpNgsGKSnL+da++++ +        +++  ++++ir+ +++ +  +  +++ f ++
  EPX70483.1 27 FTSVIGPNGSGKSNLMDAISFVLG-------VKSSHLRSSNIRELIYRGRVMNSQGSASFDDS 82
                7889******************76.......56666666666666666666666666666666 PP

  == domain 2  score: 15.8 bits;  conditional E-value: 6.9e-06
      AAA_21  192 lklveielsdlgegeeliasvderlrer.................................................gvvflengdgqelparelSd 239 
                  l++ ++e  d ++  ++ +++++  +e                                                    ++  ++  + +++++lS 
  EPX70483.1 1040 LSRLDDEFGDARKSAKDAKERFNKVKEQrlkkfyeafnhiseqidpiykeltkspafplggtgyltlddsdepylggVRFHAMPPMKRFRDMDQLSG 1136
                  333333333333333333333333333355555555555555555555555555555555555555555566666867777777899999******* PP

      AAA_21  240 Gtkrll..alltallralkkgsllliDEpEngLHPkllrrllellkelsrngaQviltT 296 
                  G k ++  all a+++  +  +++++DE+++ L+   +++++  ++++++ g Q+++ +
  EPX70483.1 1137 GEKTMAalALLFAIHSYQPA-PFFVLDEIDAALDQTNVSKIANYIRQHASSGFQFVVIS 1194
                  *****766888888887777.***************************999****9876 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.8  25.2   4.8e-13   6.6e-10       1     186 [.       6     254 ..       6     376 .. 0.67
   2 !    6.9   6.6    0.0057       7.9      95     199 ..     652     775 ..     606     776 .. 0.65
   3 ?   -1.3  14.6       1.9   2.6e+03     109     200 .]     793     926 ..     780     926 .. 0.55
   4 ?    5.5   4.4     0.015        21     109     192 ..     965    1083 ..     947    1091 .. 0.41

  Alignments for each domain:
  == domain 1  score: 39.8 bits;  conditional E-value: 4.8e-13
      AAA_23   1 kLkienfrsfrd.qeidFskgltlItGpNGaGKTTildAiklaLygetprlsrks.grgfeksdveiese........gkvkayveltfenkdgry... 86 
                 +L++enf+s+r+ q+i     +t ++GpNG+GK+ ++dAi ++L+ +++ l++++ ++ + ++ v  +++        +  +ayv+l +e +dg++   
  EPX70483.1   6 RLEVENFKSYRGcQTIGPFEDFTSVIGPNGSGKSNLMDAISFVLGVKSSHLRSSNiRELIYRGRVMNSQGsasfddseTPRSAYVKLVYELDDGEErey 104
                 799*******87699*********************************999988874455555555444445555556666888**********99888 PP

      AAA_23  87 ........................trsiererelskkkgkttkkaklellei....................deleqfisellgskkiilnlilflgqe 141
                                          +s+e++  l                 +                    ++l ++i+++ gs +   ++  +++++
  EPX70483.1 105 krvitpnggteyrindkptqfseyCKSLEEQNIL-----------------VrarnflvfqgdveaiasqspADLSRLIEQICGSLEYKGDYEKYKQEQ 186
                 8888886666555555544444442222222222.................122222222223333333566777777777777777777777777777 PP

      AAA_23 142 rfeefelkdkkerleelekeleeledekkllekleqekekek.......................ele 186
                 + + ++ ++ +++ + ++ e+++ +++k + e  e +ke+++                        +e
  EPX70483.1 187 NYAVNLSAHSFNKKRGINAEIKQYQEQKAEAEIYESRKEQRDiaslifllwkmyhieksidsnrkDIE 254
                 75555556666655555555555555555555554444444333333333322222222222111222 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0057
      AAA_23  95 elskkkgkttkkaklelleideleqfisellgskkiilnlilflgqer................feefelkdkke...........rleelekeleele 166
                 +++ k g  t ++      +++ +++i++l + +++ + +i+ +++e+                +         +           +l++le++++el 
  EPX70483.1 652 TVIHKTGLITGGSSNTRSAKRWDDREIEQLKQTQNNLMAQIDRIQSEKlaslvveqdtinlhnlE---------SelslvkeslnvKLRSLEDKQKELD 741
                 44444444444443333444566667777666666666777777777765555554555544321.........1233344455579999999999999 PP

      AAA_23 167 dekkllekle.qekekekeleeleeeleeilkel 199
                  ++ l  +++ ++++ e el+e ee + ++l+++
  EPX70483.1 742 YFNGLYGQKKpELESSERELSEMEESQAKQLQQI 775
                 9999999987466667779******999999997 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 1.9
      AAA_23 109 lelleideleqfisellgskkiil.nlilflgqer.......................feefelkdkkerleelekeleeledekkllekl........ 175
                 +++ + +el++ +++++++k+i++ n+ ++l   r                       ++e++ kd +++ e+le+e  ++e+e +ll+++        
  EPX70483.1 793 TNIRSYEELQRSFTQQYSQKQIEFaNQKALLEN-RigferqrtsdievrlnrlkdfirKDEQSIKDYEQKHEALETEVATAEAELDLLREEysetrskn 890
                 333344445555555455454544233333322.22433333444444433333322233333456666777777777777777777777777766667 PP

      AAA_23 176 ...........eqekekekeleeleeeleeilkele 200
                            ++ k   +e+++l+++ + +++e+e
  EPX70483.1 891 devlrtisqhkLESKRFLAEITKLKNDVTLTESEIE 926
                 777777665544555555599999999998888876 PP

  == domain 4  score: 5.5 bits;  conditional E-value: 0.015
      AAA_23  109 lelleideleqfisellgskkiilnlilflgqer....feefel..kdkkerleelekeleeledekkllekl........................ 175 
                  +e ++id ++q+++  ++++ i+ ++  + ++ +    +       +  +e+l+e+++ele+ +   k +e+l                        
  EPX70483.1  965 TETMDIDSSDQNVQATFNKFGIEVDYDELDDELKedgsE----SmgAVLQEKLREYNEELEKMSPNMKAMERLeiveqrlsrlddefgdarksakda 1057
                  444555555555555555555544433333333322220....122223334444444444444333333333333333333333333333112222 PP

      AAA_23  176 .........eqekekekeleeleeel 192 
                           +++k+  ++++ + e++
  EPX70483.1 1058 kerfnkvkeQRLKKFYEAFNHISEQI 1083
                  11122223333333444444444444 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.6  11.9     3e-12   4.1e-09       5     261 ..       6     335 ..       3     364 .. 0.57

  Alignments for each domain:
  == domain 1  score: 36.6 bits;  conditional E-value: 3e-12
      AAA_15   5 kikikNFRslkd..veidlseeltvliGkNnsGKSsilealdlFlnnkekkn......................kkvikiekedleifeniseskdikI 79 
                 +++++NF+s++   +  ++++ +t +iG+N+sGKS++++a+ + l  k+++                       +           +  ++ +s  +k+
  EPX70483.1   6 RLEVENFKSYRGcqTIGPFED-FTSVIGPNGSGKSNLMDAISFVLGVKSSHLrssnireliyrgrvmnsqgsasF-----------DDSETPRSAYVKL 92 
                 689********9534448999.**************************77779999*****98655444333330...........3333334444444 PP

      AAA_15  80 dvef.................................................aekekakeyektlkskekkkadlllkkkesdlkktikdkklklkkn 129
                  +e                                                      + +++   + ++ ++ +  l+++++ +l +    +k+k ++n
  EPX70483.1  93 VYELddgeereykrvitpnggteyrindkptqfseycksleeqnilvrarnflV--FQGDVEAI-ASQSPADLS-RLIEQICGSLEYKGDYEKYKQEQN 187
                 444455556666666666666666666666666666666666665555443331..22222222.222222322.367777777777777777777777 PP

      AAA_15 130 elsdekisvekkks..kkelpkekeeklekekeelkidkedlkklikkleeslkkeeelknvlksaiiklllisakRnvsdedsekkssllgklkekil 226
                 +  + + + ++kk   + e++ ++e k+e e++e  +++ d+ +li  l +    e+              ++s+++++++     k+s+ + +k++  
  EPX70483.1 188 YAVNLSAHSFNKKRgiNAEIKQYQEQKAEAEIYESRKEQRDIASLIFLLWKMYHIEK-------------SIDSNRKDIEN----FKNSANELTKRQET 269
                 777777777777777777777778888888888888888888777774444443333.............22222222222....11111111111111 PP

      AAA_15 227 eealqekl...............................eeelteklkeiqeklkeidkklaeelk 261
                 ++a+ ++l                                ++l ek++e   +l++i+ k++e +k
  EPX70483.1 270 SSAKVDSLreqegaihrqlllfdrnvckqekfiaskrpeLISLAEKASESSVNLQKIQRKVGEVEK 335
                 111111112222333333456655555555567777777555556666666666666665544444 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.6   0.0   1.5e-10   2.1e-07       1      46 [.       4      49 ..       4      58 .. 0.88

  Alignments for each domain:
  == domain 1  score: 30.6 bits;  conditional E-value: 1.5e-10
      AAA_29  1 LkrlqlvNWgtfdg.htieidlkgatlltGpsGsGKSTllDAiqalL 46
                L rl++ N  +++g +ti    +++t ++Gp+GsGKS l+DAi+++L
  EPX70483.1  4 LLRLEVENFKSYRGcQTIGPF-EDFTSVIGPNGSGKSNLMDAISFVL 49
                67999*********9998776.569********************99 PP

>> YqgF  Holliday-junction resolvase-like of SPT6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.2   1.2e-05     0.017      55     113 ..     298     356 ..     272     368 .. 0.90
   2 ?   -2.2   0.3       2.3   3.1e+03      44      85 ..     426     467 ..     406     483 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.2e-05
                 HHHHHHHH--SEEEE--SSTHHHHHHHHHHHHHHHTTB-TTS-B--EEE---TTHHHHH CS
        YqgF  55 lkkfllskkPdvigvsGenrdaqkliedvkevlhekeqdsrlstvgvilvddevailYq 113
                  +kf+ sk+P+ i+++ +  ++   ++++++ + e e+d   ++  +++ ++ +a l  
  EPX70483.1 298 QEKFIASKRPELISLAEKASESSVNLQKIQRKVGEVEKDYASQSSTLQMLENQLASLIV 356
                 479****************************************************8865 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 2.3
                 -SS-SHHHHHHHHHHHHHH--SEEEE--SSTHHHHHHHHHHH CS
        YqgF  44 drekkakfvetlkkfllskkPdvigvsGenrdaqkliedvke 85 
                  +++k +f e ++ ++++k   +  v+    + + +++ +++
  EPX70483.1 426 LKTRKLQFKELINSLIEEKDALIAEVNRRIEELESVRQSIQQ 467
                 467888999988999998888888888887777777777776 PP

>> SbcCD_C  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   4.8e-05     0.067      28      89 ..    1129    1181 ..    1121    1182 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 4.8e-05
     SbcCD_C   28 rssgtlSGGekqflaylalaaalaalyssaegrepalrlvfLDEAFsklDeesiatllelle 89  
                  r++ +lSGGek ++a+lal++a++++            +++LDE  + lD+++++++ ++++
  EPX70483.1 1129 RDMDQLSGGEK-TMAALALLFAIHSYQPA--------PFFVLDEIDAALDQTNVSKIANYIR 1181
                  7899*******.99999998887664333........4899999999999999999988876 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0      0.02        28       7      24 ..      27      44 ..      25     146 .. 0.87
   2 ?    0.1   0.3      0.65     9e+02      35      88 ..     298     353 ..     276     371 .. 0.71
   3 ?    3.7   0.0     0.052        72      85     128 ..    1149    1193 ..    1128    1198 .. 0.70

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.02
      AAA_22  7 ilvvtGesGtGKTtllrr 24
                ++ v+G+ G+GK+ l+  
  EPX70483.1 27 FTSVIGPNGSGKSNLMDA 44
                788**********99876 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.65
      AAA_22  35 aee....erpevvfvtlpsstsskdllrellralglelkaerlsseellealeqalra 88 
                 +e+    +rpe+++   ++s+ss + l+++ r++g+  k+  +s++  l++le++l +
  EPX70483.1 298 QEKfiasKRPELISLAEKASESSVN-LQKIQRKVGEVEKD-YASQSSTLQMLENQLAS 353
                 3344544777777666666665555.5********98888.66666666777777765 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.052
      AAA_22   85 alraravielliiDEaqh.lr.s..eealeeLrsllnlsrkgvqliLv 128 
                  a+++++  +++++DE++  l+ +   ++ +++ + +  +++g+q++++
  EPX70483.1 1149 AIHSYQPAPFFVLDEIDAaLDqTnvSKIANYI-RQH--ASSGFQFVVI 1193
                  566666689*********99431334444444.333..4788888876 PP

>> DUF1482  Protein of unknown function (DUF1482)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.0   0.00079       1.1       8      38 ..     543     573 ..     541     585 .. 0.90
   2 ?   -1.5   0.0       1.8   2.4e+03      12      38 ..     950     977 ..     946     980 .. 0.76

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00079
     DUF1482   8 VcylnggcedlvvgvynteqeClaameeQki 38 
                 ++ l+ +++ +vvg   t +eC   + eQ+i
  EPX70483.1 543 IAALGKNFDAIVVGSQATAKECIDYIREQRI 573
                 678999************************9 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 1.8
     DUF1482  12 nggcedlvvgvynteqeCla.ameeQki 38 
                 +g   +++++ + te e +    ++Q++
  EPX70483.1 950 SGSLSNIPIDDFGTETETMDiDSSDQNV 977
                 677899*********9988623566666 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00015       0.2      14      35 ..      28      49 ..      25     128 .. 0.85
   2 ?    5.8   0.0     0.013        18     102     134 ..    1128    1163 ..     986    1166 .. 0.58

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00015
                EEEEESTTSSHHHHHHHHTTSS CS
                xxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 14 vaivGenGaGKStLlkllagll 35
                + ++G+nG+GKS L+ +++  l
  EPX70483.1 28 TSVIGPNGSGKSNLMDAISFVL 49
                679**************98655 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.013
                  ESTTSGGS-HHHHHHHHHHHHHH....HTSSEEEEES CS
                  xxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxx RF
    ABC_tran  102 vksspssLSgGqkqrvalarall....kkpkllllDE 134 
                    +++ +LSgG+k + ala +++    + +++++lDE
  EPX70483.1 1128 F-RDMDQLSGGEKTMAALALLFAihsyQPAPFFVLDE 1163
                  2.4569***********99887611114456666666 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   4.8     0.017        24      50     152 ..     352     468 ..      30     477 .. 0.85
   2 ?   -3.2   0.1       4.4   6.1e+03      82     126 ..     661     704 ..     643     727 .. 0.54
   3 ?    6.6   0.0    0.0043       5.9     122     152 ..    1156    1183 ..    1139    1194 .. 0.68

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.017
                 EEEEESSHHHHHHHHHHHHHHTTTST.........SEEEEEETTSSHHHHHHHHHTTCSEEEEEHHHHHHHH...HCTSSHCTTEEEEEEETHHHHHHT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  50 alivePtreLaeqtlnnlkkfkkyid.........lrvlliiggvaardqlskldngvdivvgtpgrlddll...stgklnlsqvrflVlDEadrlldq 136
                 a +++  ++L+++++++ ++++++++         lr ++ ++++++  ql+ l+++v++       l++++   +t+kl+++++    + E d l  +
  EPX70483.1 352 ASLIVAEEQLTRNIHEREEQRGHKLSpedqkdydnLRNQADLQNSKTLTQLQSLNRKVKVASQAKNALAEIVedlKTRKLQFKELINSLIEEKDALIAE 450
                 55666778888999999999988655556666777999999999**********888**************99999*********99**********99 PP

                 ..TTHHHHHHHHHHSHHH CS
                 ..xxxxxxxxxxxxxxxx RF
        DEAD 137 ..gfsdfinrilnqlpqi 152
                    + ++++++ ++++q+
  EPX70483.1 451 vnRRIEELESVRQSIQQK 468
                 444445555555555443 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 4.4
                 ETTSSHHHHHHHHH.TTCSEEEEEHHHHHHHHHCTSSHCTTEEEEE CS
                 xxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  82 iggvaardqlskld.ngvdivvgtpgrlddllstgklnlsqvrflV 126
                 +gg++ ++  ++ d ++++ +  t   l+  ++  +++ +++  lV
  EPX70483.1 661 TGGSSNTRSAKRWDdREIEQLKQTQNNLMAQID--RIQSEKLASLV 704
                 555555555554442225555555544444332..22233333333 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.0043
                  EEEEEEETHHHHHHTTTHHHHHHHHHHSHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  122 vrflVlDEadrlldqgfsdfinrilnqlpqi 152 
                    f+VlDE+d  ldq      ++i+n ++q 
  EPX70483.1 1156 APFFVLDEIDAALDQTNV---SKIANYIRQH 1183
                  5699***********444...4444444333 PP

>> Sugarporin_N  Maltoporin periplasmic N-terminal extension
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   2.2      0.16   2.2e+02      29      46 ..     859     876 ..     849     883 .. 0.92
   2 ?    7.4   0.1    0.0031       4.3      21      54 ..    1029    1062 ..    1023    1063 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.16
  Sugarporin_N  29 EaRLaaLEkrLqeAeqra 46 
                   E++ +aLE +++ Ae+++
    EPX70483.1 859 EQKHEALETEVATAEAEL 876
                   9999************98 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0031
  Sugarporin_N   21 aaaasltiEaRLaaLEkrLqeAeqraqaAearak 54  
                    a+  +  +E+RL  L  +  +A   a++A++r +
    EPX70483.1 1029 AMERLEIVEQRLSRLDDEFGDARKSAKDAKERFN 1062
                    55666669***********************977 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1230 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2396  (0.133638); expected 358.6 (0.02)
Passed bias filter:                      563  (0.0314016); expected 358.6 (0.02)
Passed Vit filter:                       116  (0.00646996); expected 17.9 (0.001)
Passed Fwd filter:                        55  (0.00306766); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 1.69u 0.36s 00:00:02.04 Elapsed: 00:00:00.62
# Mc/sec: 5961.92
//
Query:       EPX70484.1  [L=534]
Description: CAF assembly factor complex large subunit Pcf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.7e-19   67.8   8.4    6.7e-19   67.8   8.4    3.7  4  CAF1A         Chromatin assembly factor 1 subunit A
  ------ inclusion threshold ------
      0.021   14.5   0.0      0.042   13.6   0.0    1.5  1  CUE           CUE domain
        3.7    7.0  13.4        5.7    6.4  13.4    1.4  1  Exonuc_VII_L  Exonuclease VII, large subunit


Domain annotation for each model (and alignments):
>> CAF1A  Chromatin assembly factor 1 subunit A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.1       1.9   1.2e+04      37      59 ..      29      50 ..      15      56 .. 0.55
   2 ?   -4.4   4.5         3   1.8e+04      52      72 ..      91     111 ..      80     117 .. 0.52
   3 ?   -7.8  10.2         3   1.8e+04      52      74 ..     127     149 ..     107     152 .. 0.64
   4 !   67.8   8.4   1.1e-22   6.7e-19       1      74 [.     296     368 ..     296     370 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 1.9
       CAF1A 37 ldYdyDSdaEWeeeeeeegedle 59
                +   y S+++  +  + e+edl 
  EPX70484.1 29 FASAYKSENDNLKS-SIEAEDLP 50
                55556666665443.33566654 PP

  == domain 2  score: -4.4 bits;  conditional E-value: 3
       CAF1A  52 eeegedleseedeeeeeeddd 72 
                 ++e + l  e d e+ e +++
  EPX70484.1  91 KKEEDRLRRERDREQRETEKK 111
                 445666775555555443333 PP

  == domain 3  score: -7.8 bits;  conditional E-value: 3
       CAF1A  52 eeegedleseedeeeeeedddee 74 
                 e+   dle+++++ee ++++ e+
  EPX70484.1 127 EKMEKDLEQQKKKEERDQKQREK 149
                 33446777666666666555544 PP

  == domain 4  score: 67.8 bits;  conditional E-value: 1.1e-22
       CAF1A   1 KllqFyedvRPpYyGTwtkkskvvg.arnPfskdekeldYdyDSdaEWeeeeeeegedleseedeeeeeedddee 74 
                 Kl+ F+ed+RPpY+GT+tkk++      nP+ +d++ +dY yDS+aEW+ + +eegedl+se+de ++++d+ +e
  EPX70484.1 296 KLIYFSEDIRPPYFGTFTKKHTEEDiNVNPWLEDST-IDYGYDSEAEWVAD-DEEGEDLDSEDDELDNSDDNLDE 368
                 89****************9777766588***77666.***********995.66******999998887776554 PP

>> CUE  CUE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   6.9e-06     0.042       6      24 ..     490     508 ..     482     510 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 6.9e-06
                 HHHHHHSTTS-HHHHHHHH CS
         CUE   6 etLkemFPdldeevIravL 24 
                 e+L+++FP++++ vI++ L
  EPX70484.1 490 EHLRQLFPHVTKNVISDTL 508
                 89*************9988 PP

>> Exonuc_VII_L  Exonuclease VII, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4  13.4   0.00096       5.7     144     232 ..      78     168 ..      28     251 .. 0.58

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.00096
  Exonuc_VII_L 144 eleeqleelerrlekaikrlleekk.qrleklasrlkspeellerkrqrldeleerleralkkqlkkkrerleelkerl.k.ekleekkerl 232
                   +le+q  + e++ +k+ + +l++++ ++ ++++++ ++ e+l ++k+++l+++e++le++ kk+ + +++r +e + r+ + ++ +++k++l
    EPX70484.1  78 KLERQRMQ-EEKARKKEEDRLRRERdREQRETEKKQREEERLAAKKKRELEKMEKDLEQQKKKEERDQKQREKEEALRIkQeQSASKEKQQL 168
                   22222111.22222222223322220233333333345555555556666666666666444443333333333333332221111112121 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (534 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3479  (0.194043); expected 358.6 (0.02)
Passed bias filter:                      823  (0.0459033); expected 358.6 (0.02)
Passed Vit filter:                       304  (0.0169558); expected 17.9 (0.001)
Passed Fwd filter:                        55  (0.00306766); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.26u 0.39s 00:00:01.65 Elapsed: 00:00:00.56
# Mc/sec: 2893.95
//
Query:       EPX70485.1  [L=610]
Description: meiotic RNA-binding protein 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.7e-20   71.2   0.0    8.6e-09   35.1   0.0    2.4  2  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.1   0.0   4.8e-13   8.6e-09       1      59 [.     334     393 ..     334     394 .. 0.98
   2 !   33.6   0.0   1.4e-12   2.6e-08       1      64 [.     422     484 ..     422     487 .. 0.95

  Alignments for each domain:
  == domain 1  score: 35.1 bits;  conditional E-value: 4.8e-13
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHH CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAleal 59 
                 +++++Lpp++++e+L  + + fG+++s k + d +++  kgf+f  Fe   +A  +++a+
  EPX70485.1 334 VYIRGLPPTTSDETLLLYCNRFGKVTSSKAIIDvNNNMCKGFGFACFEELKSASLCISAM 393
                 8*******************************************************9987 PP

  == domain 2  score: 33.6 bits;  conditional E-value: 1.4e-12
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkkl 64 
                 l+V+nLp   +e++++ lF++   + s ++ rd++++s+g++f +++++  Ae+++e++n + +
  EPX70485.1 422 LYVSNLPLHWNEDDISNLFKPHRIV-SNRVLRDSKNQSRGVGFARMQDRYVAEEIIECFNDYCI 484
                 8********************9776.*********************************98876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (610 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       676  (0.0377043); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.28s 00:00:00.91 Elapsed: 00:00:00.47
# Mc/sec: 3938.01
//
Query:       EPX70486.1  [L=678]
Description: NADPH-cytochrome p450 reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.6e-71  240.4   0.0    2.5e-71  239.8   0.0    1.3  1  FAD_binding_1  FAD binding domain
    1.9e-30  105.9   0.5    6.2e-30  104.3   0.3    2.0  2  Flavodoxin_1   Flavodoxin
      2e-20   73.5   0.0    5.2e-20   72.1   0.0    1.8  1  NAD_binding_1  Oxidoreductase NAD-binding domain
     0.0076   16.3   0.2       0.38   10.8   0.1    2.5  2  Polbeta        Polymerase beta, Nucleotidyltransferase


Domain annotation for each model (and alignments):
>> FAD_binding_1  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  239.8   0.0   5.5e-75   2.5e-71       2     222 .]     262     481 ..     261     481 .. 0.99

  Alignments for each domain:
  == domain 1  score: 239.8 bits;  conditional E-value: 5.5e-75
                    --BTTB-EEEEEEEEEE---.-SS--EEEEEEE-TTBT----TT-EEEE-----HHHHHHHHHHHT--T..T-EEEEEESSTT..S--SSSSSEEH CS
  FAD_binding_1   2 pfdakkvflakvlknreLtkpesernvihveldisdsglkYetGdhlgvypsNneelVeellellgldpkadevvelkaldeesaekeprleptTl 97 
                    p + +++f ++ +++reL++ + +rn++h+eldi +s++kY+tGd+++++p+N++++V++ll +lgl++k++ vv +k+ ++  ++k p l+ptT+
     EPX70486.1 262 PNSPANPFHSTPSHSRELFN-NDTRNCLHMELDITGSNMKYQTGDYVSICPMNPSQAVDDLLDILGLKDKRNMVVIVKPFNP--MDKLPILSPTTY 354
                    67889***************.************************************************************7..9*********** PP

                    HHHHHHTB--SS---HHHHHHHGGG-SSHHHHHHHHHHHH-..HHHHHTTTTT--HHHHHHHHHTT---TTS-HHHHHHHS-B---EEEEB-S-TT CS
  FAD_binding_1  98 rqalkyylditgppskqlleaLaefaseeeekqkLekLssd..egakeykelklneartllevleefpsvklplefLlevlpqLkpRyYSiSsssk 191
                    + +++yy++i+g  s+ql+  +a+fa++ee k++L+kL+sd  +++ ++ +++ln a++l++v+ + p++k+pl++Lle+l +LkpRyYSiSsss 
     EPX70486.1 355 DSVFRYYYEICGIISRQLIFLIAPFAPTEEAKKELTKLGSDkdYFKTNVVDMHLNLAQVLRRVSSGVPYTKVPLSLLLENLGHLKPRYYSISSSSL 450
                    ****************************************999***************************************************** PP

                    TTTTEEEEEEE--EE---SSS--EE-HHHHH CS
  FAD_binding_1 192 vhpdevhltvvVveyetdgegrirkGvcsny 222
                    ++p++vh+t+vV+++e+ ++++i++G+++ny
     EPX70486.1 451 AYPNKVHVTAVVDKKEWVDQNHIFYGLTTNY 481
                    *****************************98 PP

>> Flavodoxin_1  Flavodoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0         1   4.6e+03      46      70 ..       5      26 ..       3      44 .. 0.68
   2 !  104.3   0.3   1.4e-33   6.2e-30       1     143 []      56     204 ..      56     204 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1
                  HSEEEEEEEEETTTBEEGGGHHHHH CS
  Flavodoxin_1 46 ealllvvtsTfgnGdppengesffq 70
                  ++++lvv++T  +G ++ n   ff+
    EPX70486.1  5 DIVVLVVILTITVGYFSYN---FFS 26
                  5789999999999999877...333 PP

  == domain 2  score: 104.3 bits;  conditional E-value: 1.4e-33
                   EEEETSSSHHHHHHHHHHHHHHH.TTTEEEEEEEEGTTSC.GGGGGTHSEEEEEEEEETTTBEEGGGHHHHHHHHHHHCHH.......GCCSTTTTE CS
  Flavodoxin_1   1 ilYgSetGnteklAkqlaeelge.hgfnadvvslsdydes.lseieeealllvvtsTfgnGdppengesffqdllelkgde.......ledgdlsgv 88 
                   +l+gS+tG++e++A +   e+++  ++  +  +l+++d + l+++++ +ll++  +T+g+G+p++n+e +f +l+e + d+       +ed +l ++
    EPX70486.1  56 VLFGSQTGTAEDFAYRFSTEAKSkYKLANTTEDLENLDFTdLDKLDSSKLLVFFLATYGEGEPTDNAE-QFLELIESE-DTifssgkgTEDRPLANL 150
                   89********************9778889999******99****************************.888888888.678999999999****** PP

                   EEEEEEEECTTSSSTTHHHHHHHHHHHHTTCEEESSSEEEETTSTHGHHHHHHHH CS
  Flavodoxin_1  89 rfavfglGdsayenFcaagkkldekleelGaerllkllegdednqegqeeafrkW 143
                   r+ +fglG+++ye+++a++k++d  l +lGa+ + +++ gd++   ++ee++ +W
    EPX70486.1 151 RYVIFGLGNHTYEHYNAMAKRVDSALNALGAKSVAPVGLGDDAA-GLLEESYLQW 204
                   ******************************************99.899**99999 PP

>> NAD_binding_1  Oxidoreductase NAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.1   0.0   1.2e-23   5.2e-20       1     107 [.     535     645 ..     535     647 .. 0.91

  Alignments for each domain:
  == domain 1  score: 72.1 bits;  conditional E-value: 1.2e-23
                    EEEEGGGGHHHHHHHHHHHHH.CT..TCSEEEEEEEESSGC.GSTTHHHHHHHHHHCTTEEEEEEEESSCTTTSSSEESSHHHHHHHHHHH...HS CS
  NAD_binding_1   1 miagGtGiaPvrsvlrailee.ak..dktkvvlvyGnrtee.dllyreeleelakklpgrlkvvavvsreeagweggkgrvqdalleells...lk 89 
                    m+++GtGiaP+r+++ ++++  a+  +  k+vl+yG+r+++ d+ly+ee++++ak+l++++++ ++ sre ++    k++vq++ll++++    l 
     EPX70486.1 535 MVGPGTGIAPFRGFVMERAHLaAQgvQVAKTVLFYGCRRSDtDFLYKEEWDTYAKSLKDSFELHTAFSREGDQ----KVYVQHRLLQQSALvneLI 626
                    9**************99999944488889***********99******************9999997776665....6*********999999977 PP

                    STTEEEEEEC.SHHHHHHH CS
  NAD_binding_1  90 keethvyvCG.ppgMikav 107
                    ++++ +y+CG ++ M+k+v
     EPX70486.1 627 NAGACFYICGdAEHMAKDV 645
                    9****************98 PP

>> Polbeta  Polymerase beta, Nucleotidyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.1   8.6e-05      0.38       3      72 ..      43     103 ..      41     115 .. 0.68
   2 ?    2.7   0.0      0.03   1.3e+02      29      88 ..     572     633 ..     561     635 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 8.6e-05
                 TTTTHHHHHHHHSTTEEEEEE-S------EEEEEEEESS---HHHHHHHHHHHHHH.SSSEEEEEETTTS CS
     Polbeta   3 ikeilekekeielaylFGSrakgkareeSDiDlavllkekldleeelelaaelediklgkkvDlvdlnea 72 
                 i + +e+e ++++++lFGS+  g+a      D+a+ ++++   + +++la+  ed++  + +Dl +l+++
  EPX70486.1  43 IADKMEEE-NLSALVLFGSQT-GTAE-----DFAYRFSTE--AKSKYKLANTTEDLENLDFTDLDKLDSS 103
                 56667777.9*********98.8888.....9******99..5666677777777732233444444433 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.03
                 ---EEEEEEEESS-...--HHHHHHHHHHHHHH.SSSEEEEEETTTS-HHHHHHHHHS-EEEE CS
     Polbeta  29 eeSDiDlavllkek...ldleeelelaaelediklgkkvDlvdlneapplllyeilkegklly 88 
                 ++SD D+ +  + +   ++l++ +el +++++    +kv +++   +++ l  e ++ g ++y
  EPX70486.1 572 RRSDTDFLYKEEWDtyaKSLKDSFELHTAFSRE-GDQKVYVQHRLLQQSALVNELINAGACFY 633
                 679999987766668888899999999999999.77888888844444788999999898887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (678 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       711  (0.0396564); expected 358.6 (0.02)
Passed bias filter:                      658  (0.0367003); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.66u 0.27s 00:00:00.93 Elapsed: 00:00:00.44
# Mc/sec: 4607.11
//
Query:       EPX70487.1  [L=278]
Description: hypothetical protein SOCG_04719 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.014   15.4   0.0      0.026   14.6   0.0    1.4  1  Adhesin_E  Surface-adhesin protein E
      0.025   13.9   1.2      0.034   13.4   0.1    1.7  2  UbiA       UbiA prenyltransferase family


Domain annotation for each model (and alignments):
>> Adhesin_E  Surface-adhesin protein E
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   2.9e-06     0.026      39      99 ..      98     155 ..      89     170 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 2.9e-06
                 EEEEEEEEEEEE--SSS.TT--EEEEEEEEEEETTTTEEEEEEEEEESSSTT-SSEE--SS- CS
   Adhesin_E  39 hfDvvinlekglyvyke.perlakslRqskvvnCenyklthvksdyysefwgkGekvapkkq 99 
                  +D++ n++ +++vyk   + ++k       v  +n  l+ +k  +++ fwg+G+  +   q
  EPX70487.1  98 TIDTIDNVRYSNPVYKAeTTGFVK----FTSVTAANSGLSILKDSFFTKFWGTGTPRPLGWQ 155
                 689***********9974666666....45688999******************98876655 PP

>> UbiA  UbiA prenyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1      0.17   1.5e+03     175     202 ..      54      84 ..      24      99 .. 0.46
   2 ?   13.4   0.1   3.8e-06     0.034     118     163 ..     164     213 ..     157     248 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.17
        UbiA 175 giktlpvvlGrkaaril...lalllavllla 202
                 g+ +l    Gr   ril   + ++  +++++
  EPX70487.1  54 GRSSLLQSVGRSFKRILsrpHSFIFSLPFAL 84 
                 4444444445555555444322222222222 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 3.8e-06
        UbiA 118 gtvvggiafglppllgwaa....vtgslsllalllalavflltwaialan 163
                 + ++++++f +pp+++ ++    vt +l  ++++ ++ ++l+ +a++++n
  EPX70487.1 164 DALTIAFSFNVPPIIASYLpgglVTAQLATPCIVQLISTPLHLMALDIYN 213
                 6799***************999999999*******************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       311  (0.0173462); expected 358.6 (0.02)
Passed bias filter:                      261  (0.0145574); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 1877.54
//
Query:       EPX70488.1  [L=777]
Description: gamma tubulin complex Spc97/GCP2 subunit Alp4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.9e-64  217.5  11.0    4.3e-64  216.9  11.0    1.3  1  GCP_C_terminal  Gamma tubulin complex component C-terminal
    1.1e-61  209.2   0.3    1.1e-61  209.2   0.3    1.7  2  GCP_N_terminal  Gamma tubulin complex component N-terminal


Domain annotation for each model (and alignments):
>> GCP_C_terminal  Gamma tubulin complex component C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  216.9  11.0   4.8e-68   4.3e-64       1     304 [.     424     776 ..     424     777 .] 0.90

  Alignments for each domain:
  == domain 1  score: 216.9 bits;  conditional E-value: 4.8e-68
  GCP_C_terminal   1 LlehLkllkrylLlgqgdFisrLldalfdelwkpasselrlaLtslLeeairssna.qqsdelkddlsfaldlpevleeldakldpds....... 87 
                     L +hL++lk+y++l+q+dF+s +ld++++el kp+      +L+s+L++++r+  +  + d++k+ l+++l+++++++ l ++++ ++       
      EPX70488.1 424 LYSHLHALKHYFFLDQSDFFSTFLDTAQQELRKPVRLISATKLQSQLDLSLRQPGTiTAVDPFKEYLTLELNQTSLIDWLMHIVSISGledsalg 518
                     789**********************************99999**********987656699***********9**9**99977777669999*** PP

  GCP_C_terminal  88 ..................................legldfltLeYkvpwplslvitpealekYqriFrfLlrvkrvefalsslw..krrkatgar 146
                                                       ++g++++++ Ykvp plsl+++++a+ +Yq +Frf l vkrve++l+++w      +++++
      EPX70488.1 519 qnekgimdhftnrmdsgsdqksqnssskgmtekeIDGFEAMQFGYKVPFPLSLILSRKAIIRYQLLFRFFLMVKRVEMQLENSWlhH---SKKPT 610
                     ********************************9999*********************************************99*652...33333 PP

  GCP_C_terminal 147 svl..........lkrarllrqemlhfvsqlqyYvldeviessWreleeklkkeatdldelieaHeafLdsilkkclLrskkkllklleeileli 231
                      ++           k+a+ +r +ml++v+++ yY ++evie++W  +++++++++t +d l++ H +fLd++lk+c+L+++ kllk   ++l+++
      EPX70488.1 611 WKNkspfprierwKKKAWFMRTRMLTLVQKIRYYSMNEVIETHWPVFMKSIEHART-VDNLMQEHVDFLDTCLKECMLTNS-KLLKVNAKLLGTC 703
                     11123457777745666**********************************99999.************************.************* PP

  GCP_C_terminal 232 leFakvldgly..lsvseltaeeaeeeeleekleerleelekeFrkkvslllkvlralkeqeededlrqLllrLd 304
                       Fa+ +++++  l+ +e+ +e+ ++ +++ k+e+ l+++e++F +++++l+++++ ++++e +  l +L++rL 
      EPX70488.1 704 GMFASYTSSFTrsLQLAETGEETYDDVRMD-KMEDILKRYEENFVHHLRVLMDACNYYASTE-TAALLNLVMRLS 776
                     *****9999886555555434444444444.599*********************9997777.99********95 PP

>> GCP_N_terminal  Gamma tubulin complex component N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  209.2   0.3   1.2e-65   1.1e-61       1     303 [.      73     418 ..      73     420 .. 0.87
   2 ?   -2.5   0.1      0.34     3e+03     105     146 ..     719     772 ..     636     776 .. 0.52

  Alignments for each domain:
  == domain 1  score: 209.2 bits;  conditional E-value: 1.2e-65
  GCP_N_terminal   1 lrdllylLqGisgklirfdekdd....ervvkdvrl...pgllppslrslverllelgtlyrrlrkfveevsrsesglvlqalaaaldeelteyy 88 
                     + +ll +++G++g++i++++ ++    +++v  +++   pg+ + +l+++v++ lelg++y ++ +f+e +s++++g v++al+aal++++++y+
      EPX70488.1  73 IDELLNIFMGMEGNYIHLQDISSlsdsQKIVSPPSFvisPGF-DLGLKDIVSETLELGSYYLSIVTFIELRSQFDYGYVNHALCAALRRFMSDYL 166
                     689*************98776664444333333333667888.**************************************************** PP

  GCP_N_terminal  89 rliaqlEsqlledsesiltLlrlevwlqetllllrvLanlveeve........................................kanlkggall 143
                      l++q E++++ d+   ++L+ l +++ +t++ +++ + ++++                                          k+ +kgg++l
      EPX70488.1 167 VLLMQCEHRCQVDPG--FSLQTLRLYILPTFRSMKLVYFIIRDLVlstehdqqeddmgldniddlleklnqgndisqimqssiskKKVCKGGRVL 259
                     **************9..*************************99999999999****************99999999999999888888****** PP

  GCP_N_terminal 144 sllhe.aaq..hgdpkvrkllsellervsrpflemlekWileGelsDpynEfFveenesvakeklkeddseklweekYtlrkemlPsflseelae 235
                     ++l +   +   gdp +r++l+ ll++ srp++++l++Wi eG+++Dpy+Ef++++ +s ++++l++d+ +++we++Y++r++++P  ls+ l +
      EPX70488.1 260 TYLTDaL-TnyAGDPIARNILTFLLRESSRPYMRFLNSWIHEGKIDDPYEEFMIKSHRSLSSQRLDDDYTDEYWEKRYVIREDQVPVQLSQ-LKD 352
                     *****63.4469*******************************************************************************.*** PP

  GCP_N_terminal 236 kIletGkslnflres......cgdsew.....iekteseekeleyiddleelssslslsleelidsayklaskrllelL 303
                     k+l++Gk+ln++ e+      +          i+  e  e + +  d      ++ + s+ + i +ay +a+++ll lL
      EPX70488.1 353 KVLLAGKYLNVVIECkqasgeN----AgqtlaIN-PE--EGNTRWPD------TFEDDSFTKNIIDAYVYANESLLLLL 418
                     **************84433221....11111122.22..23333333......344778****************9877 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.34
  GCP_N_terminal 105 i..........ltLlrlevwlqetlll.lrvLanlveeve.kanlkggallsll 146
                                + + ++e  l+++ +  ++ L  l+++++  a++  +all+l+
      EPX70488.1 719 LaetgeetyddVRMDKMEDILKRYEENfVHHLRVLMDACNyYASTETAALLNLV 772
                     033333444445555555555555555455555555555543445566666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (777 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       631  (0.0351944); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.30s 00:00:00.97 Elapsed: 00:00:00.47
# Mc/sec: 5016.81
//
Query:       EPX70489.1  [L=356]
Description: UDP-glucose 4-epimerase Gal10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.3e-56  192.4   0.0    1.7e-56  192.0   0.0    1.2  1  GDP_Man_Dehyd    GDP-mannose 4,6 dehydratase
      2e-51  174.8   0.0    2.7e-51  174.3   0.0    1.2  1  Epimerase        NAD dependent epimerase/dehydratase family
      1e-15   57.5   0.0    4.3e-15   55.4   0.0    1.8  2  3Beta_HSD        3-beta hydroxysteroid dehydrogenase/isomeras
    8.9e-14   51.3   0.0    9.9e-13   47.9   0.0    2.0  2  Polysacc_synt_2  Polysaccharide biosynthesis protein
    7.9e-09   35.7   0.0    1.6e-08   34.7   0.0    1.5  1  KR               KR domain
    1.1e-08   34.8   0.0    1.7e-08   34.2   0.0    1.3  1  adh_short        short chain dehydrogenase
    3.3e-08   33.0   0.0    4.4e-08   32.6   0.0    1.1  1  RmlD_sub_bind    RmlD substrate binding domain
    9.2e-07   28.3   0.0    0.00018   20.8   0.0    2.3  1  NAD_binding_4    Male sterility protein
    7.9e-06   25.9   0.0    1.3e-05   25.2   0.0    1.3  1  NAD_binding_10   NAD(P)H-binding
     0.0011   18.5   0.0     0.0025   17.4   0.0    1.6  1  NmrA             NmrA-like family
     0.0062   16.1   0.1      0.011   15.3   0.1    1.4  1  UDPG_MGDP_dh_N   UDP-glucose/GDP-mannose dehydrogenase family
  ------ inclusion threshold ------
      0.013   15.0   0.0       0.02   14.5   0.0    1.2  1  adh_short_C2     Enoyl-(Acyl carrier protein) reductase
      0.015   15.6   0.1      0.025   14.8   0.1    1.4  1  Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding doma
      0.031   14.2   0.0      0.049   13.5   0.0    1.3  1  3HCDH_N          3-hydroxyacyl-CoA dehydrogenase, NAD binding


Domain annotation for each model (and alignments):
>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  192.0   0.0   1.4e-59   1.7e-56       1     331 [.      10     334 ..      10     335 .. 0.84

  Alignments for each domain:
  == domain 1  score: 192.0 bits;  conditional E-value: 1.4e-59
                    EEETTTSHHHHHHHHHHHHCT-CCEEEEEEESS-TTHHHHHCTTT...TTGCCEEEEE--TT-HHHHHHHHHHHT-SEEEE--S---HHHHTTSHH CS
  GDP_Man_Dehyd   1 LiTGiaGfiGsylaelLlekgyevhgivrrsssfntgriehlakdpkeeleenlklhkgDltDssslerllaevqpdevynLAAqshVdvsfekPe 96 
                    L+TG+aG+iGs+++  Llekgy+v++++++++s + + i++++k     + ++l ++k+Dl +++ le+++a++ +  v+++A+ ++V++s++ P 
     EPX70489.1  10 LVTGGAGYIGSHTVIVLLEKGYNVVVVDNLCNSRY-EAIKRIQKL----TGRDLIFYKVDLLNEKDLEEVFAKHPISSVIHFAGLKAVGESVKIPL 100
                    9****************************999855.666666543....34689****************************************** PP

                    HHHHHHTHHHHHHHHHHHHCT..TTSEEEEEEEGGGG-S-S....SSSB-TTS-----SHHHHHHHHHHHHHHHHHHHH-.--EEEEEE-E....E CS
  GDP_Man_Dehyd  97 ytaevnvlGtlrLLeairalglekkvrfyqaStsEvYGkvq....evpqtEttpfyPrsPYaaaKlyadwivvnyreayg.lfavngilfn....h 183
                    +++++n++Gt++LLe++++++++    f+++S+++vYG+++     +p+ Et p ++++PY+ +Kl+ + ++++  +a g l a   ++fn    h
     EPX70489.1 101 TYYKNNITGTVHLLECMKRHNVR---DFVFSSSATVYGDPTrpggTIPIPETCPREATNPYGKTKLFIENLIEDESKASGsLNAALLRYFNpggaH 193
                    ********************987...699***********64444799************************99999887589********88887 PP

                    ESTTS-TT..SCCCHHHHHHHHHHTTS-C-EEC.TTTT-EEEEEEHHHHHHHHHHHHHCSS---EEE-TT-EEECHHCHHCCHHCCCHHHHHH... CS
  GDP_Man_Dehyd 184 esprrget..fvtrkitravarialgkqevlyl.GnldakRdwghvkDyveamwlmlqqdkpedyviatgethsvrefvelaflelgktiewegkg 276
                         ge+   v +++++++a++a+g++e l + Gn +++ d + ++Dy+++ +l+        +v +    +  r+ v   + +lg     +g+ 
     EPX70489.1 194 PTGELGEDplGVPNNLIPYIAQVAVGRREYLSVyGNDYPTPDGTPIRDYIHVCDLADA------HVASL--AYLQRNYVGCRAWNLGSG---TGST 278
                    7777788777899999***********9988744********************9332......23222..233344444445555542...2333 PP

                    ..........TTGGCCCEECGG--SS--SB--B-THHHHHHH----SS-HHHHHHH CS
  GDP_Man_Dehyd 277 eeevg.rakesgkvvvevdpkyfrpgevdlllgdaskakeeLgWkpkvsfeelvre 331
                    + +++ + ++   ++ +++  ++r+g+v +l +d+++a+eeL+Wk + s++e++++
     EPX70489.1 279 VLQIHhAFSKAMGTELPYKITPRRDGDVVNLTADPKRANEELDWKTNRSIDEICAD 334
                    33333133555667899************************************986 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  174.3   0.0   2.1e-54   2.7e-51       1     232 [.       9     262 ..       9     272 .. 0.90

  Alignments for each domain:
  == domain 1  score: 174.3 bits;  conditional E-value: 2.1e-54
                 EEEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC........EEEE--TT-HHHHHHHHHHHT-SEEEE--S---HHHHHHSHHHHHHHH CS
   Epimerase   1 ilVtGatGfiGsalvkallekgyevigldrlssasntarledl........elveldltdrsalerlfkeeqpdavihlAavggvaassedpadfiekn 91 
                 +lVtG++G+iGs++v  llekgy+v+++d+l +++ +a ++ +         ++++dl+++++le++f+++ +  vih+A+ + v++s++ p  ++++n
  EPX70489.1   9 VLVTGGAGYIGSHTVIVLLEKGYNVVVVDNLCNSRYEAIKR-IqkltgrdlIFYKVDLLNEKDLEEVFAKHPISSVIHFAGLKAVGESVKIPLTYYKNN 106
                 79*****************************7776655444.3478***************************************************** PP

                 THHHHHHHHHHHHHTCTEEEEEEEGGGGTSCSS....SSBSTCSTTS----SSHHHHHHHHHHHHHHHHHHHH.T-EEEEEEESEEESTT.......S- CS
   Epimerase  92 lqgtlnlleaarkagvkrllflsSsevYGkdae....qpkeettltgplkpnspYaaaKlageklveayaaqy.glnaiilrlfnlyGpr.......ng 178
                 + gt++lle++++++v+ ++f sS++vYG++++    +p  et+   p + ++pY+ +Kl +e+l+e+  ++   lna  lr+fn  G++       ++
  EPX70489.1 107 ITGTVHLLECMKRHNVRDFVFSSSATVYGDPTRpggtIPIPETC---PREATNPYGKTKLFIENLIEDESKASgSLNAALLRYFNPGGAHptgelgeDP 202
                 *****************************999977755788999...99*******************9999967****************99998444 PP

                 TTSTTSHHHHHHHHHHTTS.SSEEEET......TST-EEEEEEHHHHHHHHHHHHHHHTT- CS
   Epimerase 179 egevsrvipalirkilegk.qevtllg......dgtalRdflyveDvaeaillvlehvdag 232
                  g ++++ip +i++++ g+ + + ++g      dgt+ Rd+++v D+a+a+++ l+  +++
  EPX70489.1 203 LGVPNNLIP-YIAQVAVGRrEYLSVYGndyptpDGTPIRDYIHVCDLADAHVASLAYLQRN 262
                 455888888.77777777769999999*************************999876654 PP

>> 3Beta_HSD  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.4   0.0   3.4e-18   4.3e-15       1     157 [.      10     169 ..      10     185 .. 0.82
   2 ?   -0.5   0.0       0.4   5.1e+02     208     235 ..     235     262 ..     216     268 .. 0.79

  Alignments for each domain:
  == domain 1  score: 55.4 bits;  conditional E-value: 3.4e-18
   3Beta_HSD   1 vvtGgaGFlGralvkeLvrleelkevrvlD..lrespelleelskvnvkk..viegDvtdkdkleealeg..vdvvihlaslvdvag.kltedeimkvn 92 
                 +vtGgaG++G++ v  L++ +   +v v+D   + + e  ++++k+  ++  + ++D++++++lee+  +  ++ vih a+l  v   +    +++k n
  EPX70489.1  10 LVTGGAGYIGSHTVIVLLEKG--YNVVVVDnlCNSRYEAIKRIQKLTGRDliFYKVDLLNEKDLEEVFAKhpISSVIHFAGLKAVGEsVKIPLTYYKNN 106
                 69***************9999..5999***544445555566666666668999************876533789**********985667889***** PP

   3Beta_HSD  93 vkGTrnvleacvkagvrvlvYtSsaevvgpnslgeeilngdEeleyeslhqdaypesKalaEklv 157
                 + GT  +le  ++++vr +v+ Ssa v g+ ++    +   E+ ++e   +++y ++K   E+l+
  EPX70489.1 107 ITGTVHLLECMKRHNVRDFVFSSSATVYGDPTRPGGTIPIPETCPREA--TNPYGKTKLFIENLI 169
                 *****************************9777666666677776665..478888888888887 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.4
   3Beta_HSD 208 deevlsdrvYvgNvawahilAaralqdp 235
                 d   + d++ v  +a+ah+    +lq +
  EPX70489.1 235 DGTPIRDYIHVCDLADAHVASLAYLQRN 262
                 5566788899999999999888888865 PP

>> Polysacc_synt_2  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.9   0.0   7.7e-16   9.9e-13       1     128 [.       9     130 ..       9     138 .. 0.85
   2 ?    1.2   0.0      0.13   1.6e+02     134     167 ..     154     185 ..     151     191 .. 0.77

  Alignments for each domain:
  == domain 1  score: 47.9 bits;  conditional E-value: 7.7e-16
                      EEEETTTSHHHHHHHHHHHHHB-SEEEEEES-HHHHHHHHHH......-TTEEEE....E--TT-HHHHHHHTT..T-SEEEE------HHHHH CS
  Polysacc_synt_2   1 vlvtGagGsiGselvrqilkkkpkkiillerdElklyeiekeleeelkkkklkveivpvigdvrdkerlekaleelkvdvvfhaAAlKhVPlve 94 
                      vlvtG++G iGs+ v  +l+k  + + ++++  ++ ye  k+++ +l+ ++l ++      d+ +++ le+++ ++ +  v+h A lK V    
       EPX70489.1   9 VLVTGGAGYIGSHTVIVLLEKGYNVV-VVDNLCNSRYEAIKRIQ-KLTGRDLIFY----KVDLLNEKDLEEVFAKHPISSVIHFAGLKAVGESV 96 
                      8**************99998887655.55666666666656664.4445455444....6899******************************* PP

                      HSHHHHHHHHHHHHHHHHHHHHHTT-SEEEEEEE CS
  Polysacc_synt_2  95 enpleaiktNvlgtenvieaaieagvkkvvliSt 128
                      + pl   k+N++gt +++e+ ++++v+++v+ S+
       EPX70489.1  97 KIPLTYYKNNITGTVHLLECMKRHNVRDFVFSSS 130
                      ******************************9886 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.13
                      --SHHHHHHHHHHHHHHHGGG--SSS--EEEEEE CS
  Polysacc_synt_2 134 PtnvmGatKrlaekllqalakeseekktkfvvvR 167
                       tn +G tK++ e l+   +k s++   + ++ R
       EPX70489.1 154 ATNPYGKTKLFIENLIEDESKASGS--LNAALLR 185
                      6999***********9998888744..4444555 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.7   0.0   1.2e-11   1.6e-08       2     144 ..       8     137 ..       7     140 .. 0.82

  Alignments for each domain:
  == domain 1  score: 34.7 bits;  conditional E-value: 1.2e-11
                 EEEEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHT.T-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE---------TTT CS
          KR   2 tylitGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaeleal.gaevevvaaDvsdkdavealleeikaeeppikGvihaAgvlrdkllee 99 
                 t+l+tGG+G +G +++  l+ekg + +v+   + +++ +    i+++++l g +  ++++D+ +++++e+++++      pi+ vih Ag+ + +   +
  EPX70489.1   8 TVLVTGGAGYIGSHTVIVLLEKGYNVVVVDNLC-NSRYE---AIKRIQKLtGRDLIFYKVDLLNEKDLEEVFAKH-----PISSVIHFAGLKAVGESVK 97 
                 78*********************9998887777.44444...45555554478899****************986.....7*********998887777 PP

                 --HHHHHHHHTTTTHHHHHHHHHTTTS--SEEEEEEEHHHHH--T CS
          KR 100 mtaedleqvlapKvkGawnLhelledesldffvlfSSiagllgsa 144
                          ++  ++G+ +L e+++++++  fv fSS a+++g +
  EPX70489.1  98 IPLT----YYKNNITGTVHLLECMKRHNVRDFV-FSSSATVYGDP 137
                 6665....5666799***************998.56667777765 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   0.0   1.3e-11   1.7e-08       1     114 [.       7     112 ..       7     130 .. 0.83

  Alignments for each domain:
  == domain 1  score: 34.2 bits;  conditional E-value: 1.3e-11
                 SEEEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHT.TSEEEEEE-TTTSHHHHHHHHHHHHHHHSSESEEEE---SS--SSGGGCSH CS
   adh_short   1 kvvlvtGassGIGraiakelakeGakvvvvdrseekleevakelkee.gakalaiqvDvtdreevealvekavkklgkldvLvnNAGitgsgpfselse 98 
                 ++vlvtG+++ IG  ++  l+++G++vvvvd+  +   e++k ++++ g+++++++vD+ +++++e++++k      ++  +++ AG++ +g+  ++  
  EPX70489.1   7 NTVLVTGGAGYIGSHTVIVLLEKGYNVVVVDNLCNSRYEAIKRIQKLtGRDLIFYKVDLLNEKDLEEVFAKH-----PISSVIHFAGLKAVGESVKIPL 100
                 58******************************************************************9986.....7777777777755555444433 PP

                 HHHHHHHHHHTHHHHH CS
   adh_short  99 eewervievNltgvfl 114
                      +++ N+tg+++
  EPX70489.1 101 ----TYYKNNITGTVH 112
                 ....344445555555 PP

>> RmlD_sub_bind  RmlD substrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.6   0.0   3.5e-11   4.4e-08       2     141 ..       8     174 ..       7     185 .. 0.92

  Alignments for each domain:
  == domain 1  score: 32.6 bits;  conditional E-value: 3.5e-11
                    EEEEESTTSHHHHHHHHHCTTTSEEEEEE-TT......................T--TTSHHHHHHHHHHH--SEEEE------HHHHHHSHHHHH CS
  RmlD_sub_bind   2 kilvtGanGqlGseLakqlaeeglevlaltre......................eldltdaeavaellkeakpdvvvnaAAytavDkaEseeeaay 75 
                    ++lvtG+ G +Gs+ +  l e+g++v+ +++                       ++dl +++ ++e+++++  + v++ A  +av +  + +   y
     EPX70489.1   8 TVLVTGGAGYIGSHTVIVLLEKGYNVVVVDNLcnsryeaikriqkltgrdlifyKVDLLNEKDLEEVFAKHPISSVIHFAGLKAVGESVKIPLTYY 103
                    68**************************98878999************************************************************ PP

                    HHHTHHHHHHHHHHHHCT-E.EEEEEEGGGS-S-....TTS-B-TTS----SSHHHHHHHHHHHHHHHH-S CS
  RmlD_sub_bind  76 avnaeavealAeaaaavgal.LihvStDyVFdGe....kkrpYeeddetsPlnvYGrtKlaGEqavlaagk 141
                    + n +++ +l e  +++++  +++ S+  V+        + p  e+ + +  n YG+tKl  E+ +++++k
     EPX70489.1 104 KNNITGTVHLLECMKRHNVRdFVFSSSATVYGDPtrpgGTIPIPETCPREATNPYGKTKLFIENLIEDESK 174
                    ******************965999999999954456766778888888888999************98765 PP

>> NAD_binding_4  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.0   1.4e-07   0.00018       1     195 [.      11     177 ..      11     198 .. 0.73

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 1.4e-07
                    EE-TTSHHHHHHHHHHHHHS-.TEEEEEE-SSSHHHHHHHHHHHT-SS-HHHHHHHHHTTTEEEEE--TTSGGGG--HHHHHHH..HHH--EEEE- CS
  NAD_binding_4   1 lTGaTGFLGkvLlekLLrttpevkiyllvRaksgesaeeRleeelekkelfsallkelaerikvveGDlseprlGLseedlqel..aeevdviihs 94 
                    +TG+ G++G++ +  LL++  +  +++   ++s  +a +R+ ++l+  +            +++++ Dl      L+e+dl+e+   + ++ +ih 
     EPX70489.1  11 VTGGAGYIGSHTVIVLLEKGYN-VVVVDNLCNSRYEAIKRI-QKLTGRD------------LIFYKVDL------LNEKDLEEVfaKHPISSVIHF 86 
                    5778888888888778777776.344444455556677777.3333333............34555566......45556666632345999**** PP

                    -SS-S.STTSSE...EHHHHHHHHHHHHHHHTSSS--.-EEEEEEGGGTTS-TTT--SSS-H......HHH--EEEETTTCCCHHHHHHHHHHHHH CS
  NAD_binding_4  95 aAtvnfdepyke...llrvNveGtrevlelakklkklkvllhvSTayvngeregeveekvyeegekeekldederaklkglpntYeqsKalaEklv 187
                    a+   + e++k     ++ N++Gt+++le  k+  + + +++ S+a+v+g+ ++               +    ++  ++ +n Y ++K   E+l+
     EPX70489.1  87 AGLKAVGESVKIpltYYKNNITGTVHLLECMKRH-NVRDFVFSSSATVYGDPTRPG------------GTIPIPETCPREATNPYGKTKLFIENLI 169
                    ***9999999975558899**********88865.555*******99999998654............34556677788899************** PP

                    HHHHHHH- CS
  NAD_binding_4 188 rearrrsg 195
                    +++++ sg
     EPX70489.1 170 EDESKASG 177
                    *9997654 PP

>> NAD_binding_10  NAD(P)H-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.0   9.8e-09   1.3e-05       1     108 [.      13     140 ..      13     177 .. 0.70

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 9.8e-09
                     TTTSHHHHHHHHHHHHC-T-EEEEEETT..HHHCHHHHCTTTCE.....EEE--TT-CCHHHHHHTT-S..EEEES---TCC...........HH CS
  NAD_binding_10   1 GAtGkvGrllvkellargghevtalvRn..peklaeleaeegle.....vvegdvtdvedlaealkgad..aVvsalggggk...........de 75 
                     G+ G +G++ v  ll++g ++v+ +v n   ++ +++++ ++l+       ++d+++++dl+e+++ +    V+  +g ++            + 
      EPX70489.1  13 GGAGYIGSHTVIVLLEKG-YNVV-VVDNlcNSRYEAIKRIQKLTgrdliFYKVDLLNEKDLEEVFAKHPisSVIHFAGLKAVgesvkipltyyK- 104
                     999**************5.9985.5677664444444433333322222789**************9963336555533333223446555552. PP

                     HH....HHHHHHHHHHCT--EEEEEEETTTTSGCGCH CS
  NAD_binding_10  76 eg....aknivdaakeagvkRfvlvsaigvgdevpge 108
                           ++++++ +k+++v+ fv+ s++ v+ +  ++
      EPX70489.1 105 -NnitgTVHLLECMKRHNVRDFVFSSSATVYGDPTRP 140
                     .04567************************9754443 PP

>> NmrA  NmrA-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0     2e-06    0.0025       1     101 [.       9     129 ..       9     136 .. 0.76

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 2e-06
                 EEESSTTSHHHHHHHHHHHHHT-EEEEE..ES-S-SHHHHHHHH.STTEEE..ES-TT-HHHHHHHHTT..-SEEEE---GG.............S-HH CS
        NmrA   1 IlviGaTGrqGksvvrallkaghkvral..vRdtkselakslke.aGvelv..kgdlddkeslvealkg..vdvvfsvtgfy.............skei 79 
                 +lv+G++G++G++ v +ll++g++v ++  + +++ e++k +++  G  l+  k dl +++ l+e++ +     v+   g++             +++i
  EPX70489.1   9 VLVTGGAGYIGSHTVIVLLEKGYNVVVVdnLCNSRYEAIKRIQKlTGRDLIfyKVDLLNEKDLEEVFAKhpISSVIHFAGLKavgesvkipltyyKNNI 107
                 79**********************977533445588888888773478888779999999999999987223445555554467777777777778888 PP

                 HHHHHHHHHHHHHS-SEEEEEE CS
        NmrA  80 edgkklvdAakeaGvkhfiySs 101
                    ++l +  k+  v+ f++Ss
  EPX70489.1 108 TGTVHLLECMKRHNVRDFVFSS 129
                 8888888888888888888887 PP

>> UDPG_MGDP_dh_N  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.1   8.9e-06     0.011       7      31 ..      14      38 ..       8      79 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 8.9e-06
                    --STTHHHHHHHHHHCTSEEEEE-S CS
  UDPG_MGDP_dh_N  7 GlGYvGlvtaavlaeighevigvDi 31
                    G+GY+G  t +vl e+g +v++vD+
      EPX70489.1 14 GAGYIGSHTVIVLLEKGYNVVVVDN 38
                    9***********************7 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   1.5e-05      0.02       6      62 ..      18      77 ..      13      99 .. 0.91

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 1.5e-05
                  HHHHHHHHHHHTT-EEEEEESSGGH.HHHHHHHHHHTTSE.E.EE--TTSHHHHHHHHHH CS
  adh_short_C2  6 IGraiAkalaeeGaevvltdlneea.kkrveelaeelgae.v.lecDVtdeeqvealvee 62
                  IG +++  l e+G++vv++d   ++  ++++++++ +g++ + +++D  +e+++e+++++
    EPX70489.1 18 IGSHTVIVLLEKGYNVVVVDNLCNSrYEAIKRIQKLTGRDlIfYKVDLLNEKDLEEVFAK 77
                  99******************98888789**********99747**************986 PP

>> Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.1     2e-05     0.025       3      77 ..      11      87 ..       9      97 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 2e-05
                     EE--.SHHHHHHHHHHHCTCCT-GEEEEEES...SHHHHHHHHCHHTTTCEEEEE--TTTHHHHHHHHHTTS..SEEEE-S CS
  Sacchrp_dh_NADP  3 iiGa.GsvGqavaellarhfdvdaeitvadr...skeklealaakalgvrfeaialdaenyeavLaallkeg..dlvvnls 77
                     + G+ G++G+ ++ +l++++ +  +++v+d    s+ ++ + ++k++g +++++++d  n+++ L+++ +++    v++ +
       EPX70489.1 11 VTGGaGYIGSHTVIVLLEKG-Y--NVVVVDNlcnSRYEAIKRIQKLTGRDLIFYKVDLLNEKD-LEEVFAKHpiSSVIHFA 87
                     55555***********9997.5..7999986211444444455556*****************.*****999888888876 PP

>> 3HCDH_N  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   3.8e-05     0.049       6      48 ..      14      56 ..       8     100 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 3.8e-05
                --SCCHHHHHHHHHHTT-EEEEE-S-HHHHHHHHHHHHHHHHC CS
     3HCDH_N  6 GaGtmGagiaavfasagleVvlvdiseealekalekiekslek 48
                GaG +G+    v++++g++Vv+vd   ++  +a ++i+k + +
  EPX70489.1 14 GAGYIGSHTVIVLLEKGYNVVVVDNLCNSRYEAIKRIQKLTGR 56
                89***********************888888888888885444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       347  (0.0193541); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.55u 0.29s 00:00:00.84 Elapsed: 00:00:00.46
# Mc/sec: 2322.31
//
Query:       EPX70490.1  [L=390]
Description: ran GTPase binding protein Hba1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-19   70.5   0.0    3.8e-19   69.2   0.0    1.7  1  Ran_BP1   RanBP1 domain
  ------ inclusion threshold ------
      0.057   13.3   0.0       0.11   12.5   0.0    1.4  1  WH1       WH1 domain


Domain annotation for each model (and alignments):
>> Ran_BP1  RanBP1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.2   0.0   4.2e-23   3.8e-19       1     117 [.     259     380 ..     259     385 .. 0.85

  Alignments for each domain:
  == domain 1  score: 69.2 bits;  conditional E-value: 4.2e-23
                 ----SSTTEEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEETTT..TEEEEEEEETTTTEEEEEEEE-TTS-EEESTTESSEE...EEEEEE-TTSSS CS
     Ran_BP1   1 evksgEEdEevlfkqraKLfrfdaekkewkeRGvGdiKilkkkdd..ekvRllmRrdqvlkvcaNhvitkemklkplagsdrsl...vwtaadaadeea 94 
                 e+ +gEE E++l+++ra+L+  d ekk wkeRG G +K++   +   ++ Rl+mR d v +v++N  + + m  k ++ +  s          ++ e++
  EPX70490.1 259 EIITGEEKEKTLYSVRARLYVVDGEKKIWKERGHGVLKVNVPIEGseGAHRLVMRNDAVHRVIMNVPLFQGMSEKAFQIASASSggsANYVKIFVIENG 357
                 6889***********************************9865543499***********************999886544433110233467999*** PP

                 EEEEEEEEESSHHHHHHHHHHHH CS
     Ran_BP1  95 kleqlaikfkkkeeadefkkkfe 117
                 + + +a+++k +e a +++ ++ 
  EPX70490.1 358 NSVLYAVHVKDNESASQLRDHIL 380
                 *****************998875 PP

>> WH1  WH1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.2e-05      0.11       7      71 ..     266     330 ..     262     336 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.2e-05
                 .EEEEEEEEEEEEEEETTTTCEEEEC.ECEEEEEEEEETTTTEEEEEEEETTT-SEEEEEEE-SS- CS
         WH1   7 kcqtiasavaqvyladpakketWika.khagavslvkdstqnsyflrlvklqdakvvieqeiyknl 71 
                 k +t+ s +a++y++d++kk  W++  + + +v +  + ++  ++l++++   ++v+++  + +++
  EPX70490.1 266 KEKTLYSVRARLYVVDGEKKI-WKERgHGVLKVNVPIEGSEGAHRLVMRNDAVHRVIMNVPLFQGM 330
                 6699***********888888.***87778889999999999******997799*****9999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (390 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2457  (0.137041); expected 358.6 (0.02)
Passed bias filter:                      595  (0.0331865); expected 358.6 (0.02)
Passed Vit filter:                       170  (0.00948185); expected 17.9 (0.001)
Passed Fwd filter:                        71  (0.00396006); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.43u 0.39s 00:00:01.81 Elapsed: 00:00:00.57
# Mc/sec: 2072.52
//
Query:       EPX70491.1  [L=262]
Description: GRIP domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.7e-11   41.7   0.3    1.7e-10   40.6   0.3    1.7  1  GRIP             GRIP domain
  ------ inclusion threshold ------
      0.072   12.3   7.5      0.067   12.4   6.2    1.4  1  LYTB             LytB protein
       0.11   12.5  13.1        1.7    8.7   1.1    2.5  2  DUF1664          Protein of unknown function (DUF1664)
       0.12   12.5   0.5       0.35   11.1   0.5    1.8  1  APS-reductase_C  Adenosine-5'-phosphosulfate reductase beta s
       0.15   10.8  24.0       0.21   10.4  24.0    1.2  1  Mitofilin        Mitochondrial inner membrane protein
       0.19   10.2  23.4       0.22   10.1  23.4    1.1  1  Macoilin         Macoilin family
       0.22   11.9  18.2        1.2    9.5   2.3    4.4  4  TSC22            TSC-22/dip/bun family
       0.24   10.8   2.9       0.39   10.1   2.9    1.3  1  ZYG-11_interact  Interactor of ZYG-11
       0.43   10.9  23.7        1.1    9.6  11.5    2.4  2  THOC7            Tho complex subunit 7
       0.76   10.1   5.2        0.9    9.9   0.5    2.8  3  kleA_kleC        Uncharacterized KorC regulated protein A
       0.85    9.6  27.7       0.48   10.5  20.8    2.4  2  DUF1640          Protein of unknown function (DUF1640)
          1    9.6  29.1       0.25   11.6  14.1    3.0  3  TMF_TATA_bd      TATA element modulatory factor 1 TATA bindin
        1.8    7.9  28.5       0.79    9.1  25.8    1.6  1  Golgin_A5        Golgin subfamily A member 5
        2.2    8.5   7.8        8.5    6.6   4.1    3.2  3  DUF4145          Domain of unknown function (DUF4145)
        4.2    7.7  17.0        4.5    7.6  12.5    3.0  2  Syntaxin-18_N    SNARE-complex protein Syntaxin-18 N-terminus
        6.8    6.4  13.3        2.4    7.9  10.4    1.6  1  DUF745           Protein of unknown function (DUF745)
        7.8    6.5  14.1        4.9    7.2   0.5    3.7  3  Pox_A_type_inc   Viral A-type inclusion protein repeat
        8.1    7.1  29.2        9.5    6.9  10.0    3.5  3  YabA             Initiation control protein YabA


Domain annotation for each model (and alignments):
>> GRIP  GRIP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.6   0.3   1.8e-13   1.7e-10       2      43 ..     217     256 ..     216     257 .. 0.95

  Alignments for each domain:
  == domain 1  score: 40.6 bits;  conditional E-value: 1.8e-13
        GRIP   2 anleYLKNVllqFLeskeaserkqLvpVlstlLkfspeEeqk 43 
                 ++ eY++NVl+qFLe++e  +r+q++p+l+  L++++  +q 
  EPX70491.1 217 IDKEYVRNVLIQFLENQE--HREQILPILAIALDLDEIHQQI 256
                 689***************..*****************99986 PP

>> LYTB  LytB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   6.2   6.7e-05     0.067      73     187 ..      12     142 ..       4     161 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 6.7e-05
                 HHHHHHTTEE..EEE---HHHHHHHHHHHHHHHCT-EEEEES-TT-HHHHHHHCCT--TEEEESS....CHHH.HHG.........CEEEEE-TTS-HH CS
        LYTB  73 eeelkekgle..vvDatCplVkkvqkevkklakegyeiviiGkkkHpEvegilgqaeekvvvvee....seev.ekl.........kvalvsQTTlsve 155
                 ++e +e++l+  v+D+  p V+   k+ kk +k+++ +    + +H+E e  + q++ek  +v+e    +e++ +++             ++ T  s+ 
  EPX70491.1  12 QRENHENNLKenVTDTIPPTVNSSSKKKKKNKKKKKPVTTQANGEHQENETSNNQKNEKDSLVSEllleNEDLkNEIdalkstleeTKRNYVDTNESKG 110
                 55555666666799*****************************************88775555433333444323336667778875566778999999 PP

                 HHHHHHHHHHHHSTCEEEC-S--CHHHHHHHH CS
        LYTB 156 efeeivealkkklkelevkdtiCkatqeRqea 187
                 ++ e +++lk+++++l+ +++i  + + R ++
  EPX70491.1 111 HILEEMDNLKQQIQDLKESNEIKLEEKTRAQE 142
                 99999999999999999999987666666433 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   5.5    0.0024       2.4      51     123 ..      71     144 ..      57     145 .. 0.82
   2 ?    8.7   1.1    0.0017       1.7      37      85 ..     145     189 ..     143     203 .. 0.73

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0024
     DUF1664  51 eqvseslaatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeave.glesklerieek 123
                 +++ ++l    ++L+++id + ++l+e+k+   +++e   ++ e++++++++++ +ke  e +le+k +  ee+
  EPX70491.1  71 DSLVSELLLENEDLKNEIDALKSTLEETKRNYVDTNESKGHILEEMDNLKQQIQDLKESNEiKLEEKTRAQEET 144
                 56677777888999*************************************99999987653677776666655 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0017
     DUF1664  37 rslsdavesvskqleqvseslaatkrhLssridrvdkkldeqkeiskei 85 
                 ++l+d + +v+++l +  +++++ k++L    + +dkk +   +is+  
  EPX70491.1 145 QNLQDMLRNVGNELVDSRDEVKELKEKL----QDLDKKDETAVQISEVN 189
                 79999********999999998766655....56666666666665544 PP

>> APS-reductase_C  Adenosine-5'-phosphosulfate reductase beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.5   0.00035      0.35      33      73 ..      41      83 ..      36      93 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00035
                     -EEEEEEE--SS-TT---T..TTT-----HHHHTSS--TTTTG CS
  APS-reductase_C 33 kvkrfkfpirTtpeGsaqp..ladvaepskedldselLftepk 73
                     k k+ k p++T+  G++q   + + ++++k++l selL ++++
       EPX70491.1 41 KNKKKKKPVTTQANGEHQEneTSNNQKNEKDSLVSELLLENED 83
                     5677899*********99866778888899999***9986654 PP

>> Mitofilin  Mitochondrial inner membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4  24.0   0.00022      0.21      64     259 ..      17     182 ..       4     239 .. 0.51

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00022
   Mitofilin  64 isklqvsavsevtkeskepkeekkkeksekqssassevaeeeaeatkkaaeakaqqpkseqekekaleevlke..alskaekataaakeakdeakkavk 160
                   +l+ +++ +++   + ++++kkk+k++k++ ++++  e ++ +t+  ++++  ++  ++e+  + e+ ++e  al+++ + t++    ++e+k  + 
  EPX70491.1  17 ENNLKENVTDTIPPTVNSSSKKKKKNKKKKKPVTTQANGEHQENETSNNQKNE--KDSLVSELLLENEDLKNEidALKSTLEETKRNYVDTNESKGHIL 113
                 34445555555555555555555555555555555555555555555555555..55555555544444444411344444444444455677778888 PP

   Mitofilin 161 eavdklkeasdteeksrekardtaleaaeaaaek.....................eleklkevielakqseeeaakplldaaeetlekliehlkkveek 238
                 e++d+lk+++++ ++s+e + +     ++ +a++                     e+++lke+ ++                                 
  EPX70491.1 114 EEMDNLKQQIQDLKESNEIKLE-----EKTRAQEetqnlqdmlrnvgnelvdsrdEVKELKEKLQD--------------------------------- 174
                 8888888888888777777754.....222332211222333444444444333322222222222................................. PP

   Mitofilin 239 vekaqslaklvekykelveee 259
                              + ++ e++
  EPX70491.1 175 -------------LDKKDETA 182
                 .............22222222 PP

>> Macoilin  Macoilin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1  23.4   0.00022      0.22     342     505 ..      32     184 ..       3     238 .. 0.65

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00022
    Macoilin 342 snssskkhsessksvtsssssknskkqklpaGkssaalkdaaenslpnnqlskkda........lvrLeadikkLkaeLqasrqteqelrskissltse 432
                 +nsssk             ++k++kk+k p   +++a+ ++ en  +nnq  +kd          + L ++i  Lk+ L++++++  + ++      +e
  EPX70491.1  32 VNSSSK-------------KKKKNKKKKKP--VTTQANGEHQENETSNNQKNEKDSlvsellleNEDLKNEIDALKSTLEETKRNYVDTNESKGHILEE 115
                 222222.............33333333443..3334555566666677777666663333332223466677778888877777777777777777777 PP

    Macoilin 433 erslkselqqlkkendllqtklhelvsakqkdkqtlqqlekrLkeekearaslekqLaeekkrkkeeeetaar 505
                   +lk+++q lk+ n+    kl+e +   q++ q+lq + + +++e        k L+e  +   +++eta +
  EPX70491.1 116 MDNLKQQIQDLKESNEI---KLEEKT-RAQEETQNLQDMLRNVGNELVDSRDEVKELKEKLQDLDKKDETAVQ 184
                 77888888888777764...666654.458999**********999754444456677766666566667665 PP

>> TSC22  TSC-22/dip/bun family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.1      0.73   7.2e+02      30      45 ..       8      25 ..       5      37 .. 0.76
   2 ?    2.3   0.5      0.21   2.1e+02      26      44 ..      77      95 ..      72     102 .. 0.55
   3 ?    9.5   2.3    0.0012       1.2      14      31 ..     114     131 ..     111     154 .. 0.81
   4 ?    8.4   0.2    0.0027       2.7      13      48 ..     162     197 ..     158     205 .. 0.73

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.73
       TSC22 30 nseleeEN..slLkalas 45
                ns l++EN  + Lk++++
  EPX70491.1  8 NSDLQRENheNNLKENVT 25
                778899984457888876 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.21
       TSC22 26 LeernseleeENslLkala 44
                L+ +n+ l++E   Lk+++
  EPX70491.1 77 LLLENEDLKNEIDALKSTL 95
                5555555555555555443 PP

  == domain 3  score: 9.5 bits;  conditional E-value: 0.0012
       TSC22  14 EeVevLkekIkeLeerns 31 
                 Ee ++Lk++I++L e n+
  EPX70491.1 114 EEMDNLKQQIQDLKESNE 131
                 9************99986 PP

  == domain 4  score: 8.4 bits;  conditional E-value: 0.0027
       TSC22  13 rEeVevLkekIkeLeernseleeENslLkalaspeq 48 
                 r+eV +Lkek ++L ++ ++  +  ++  + ++p++
  EPX70491.1 162 RDEVKELKEKLQDLDKKDETAVQISEVNCNEITPNV 197
                 9*************9887665555555555555555 PP

>> ZYG-11_interact  Interactor of ZYG-11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   2.9   0.00039      0.39      18     103 ..      97     188 ..      81     196 .. 0.69

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00039
  ZYG-11_interact  18 avknegseeeavirlvirtysklgrdleqavekrlkklpeegerl..leqllssi.....fsqkskdslnelvnalvdlsppeklssksivei 103
                       +k +  +++ +   +++++ +l +++++  e +  kl+e+++++   ++l+  +         s+d+++el + l+dl   +  ++ +i+e+
       EPX70491.1  97 ETKRNYVDTNESKGHILEEMDNLKQQIQDLKESNEIKLEEKTRAQeeTQNLQDMLrnvgnELVDSRDEVKELKEKLQDLD-KKDETAVQISEV 188
                      4466666677777889999*************999999887765522334444343334433456**************9.555566677776 PP

>> THOC7  Tho complex subunit 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6  11.5    0.0011       1.1      23      99 ..      53     131 ..      22     136 .. 0.83
   2 ?    5.9   5.8     0.014        14      67     121 ..     134     188 ..     129     196 .. 0.91

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.0011
       THOC7  23 llklltsla.........esteeeleqlkedllldfaafelsierlqllakanerereryeaekeeieseieavreeieelkaqLe 99 
                         +         +++++e ++l  +lll+ + ++++i+ l+  ++ ++r+    ++ k +i++e+ +++++i++lk+++e
  EPX70491.1  53 A-------NgehqenetsNNQKNEKDSLVSELLLENEDLKNEIDALKSTLEETKRNYVDTNESKGHILEEMDNLKQQIQDLKESNE 131
                 3.......133333456688899***********************************************************9987 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.014
       THOC7  67 erereryeaekeeieseieavreeieelkaqLeearatranrkeydelaekItsn 121
                  +e+ r ++e++++++ + +v +e ++ +++ +e ++ +++  + de a +I++ 
  EPX70491.1 134 LEEKTRAQEETQNLQDMLRNVGNELVDSRDEVKELKEKLQDLDKKDETAVQISEV 188
                 57999999*****************************************999985 PP

>> kleA_kleC  Uncharacterized KorC regulated protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.1      0.68   6.8e+02      22      56 ..      69      97 ..      58     120 .. 0.61
   2 ?   -0.1   0.1       1.2   1.2e+03      28      46 ..     111     129 ..      93     148 .. 0.67
   3 ?    9.9   0.5   0.00091       0.9      10      41 ..     149     180 ..     140     185 .. 0.93

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.68
   kleA_kleC 22 rRdki.AaklaeAeeLvrqaeeLRakvyeesaaLed 56
                ++d +  ++l e e+L+ ++++L+        +Le+
  EPX70491.1 69 EKDSLvSELLLENEDLKNEIDALKS-------TLEE 97
                4444313455555555555555554.......4433 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 1.2
   kleA_kleC  28 aklaeAeeLvrqaeeLRak 46 
                   l+e ++L++q+++L+  
  EPX70491.1 111 HILEEMDNLKQQIQDLKES 129
                 5677888888888888754 PP

  == domain 3  score: 9.9 bits;  conditional E-value: 0.00091
   kleA_kleC  10 DeLpevatdlvarRdkiAaklaeAeeLvrqae 41 
                 D L +v+++lv  Rd++ ++ ++ ++L ++ e
  EPX70491.1 149 DMLRNVGNELVDSRDEVKELKEKLQDLDKKDE 180
                 89*************************99976 PP

>> DUF1640  Protein of unknown function (DUF1640)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5  20.8   0.00048      0.48      18     149 ..      19     145 ..       4     156 .. 0.70
   2 ?    1.4   3.1       0.3     3e+02     112     139 ..     156     183 ..     137     193 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00048
     DUF1640  18 eqAeaimsaltevlneslekvakslvskselekseylqkaalselrkevqisersefaalrseteklqreleklkqkLreeidklkadirldlnleKgr 116
                 +  e +++++   +n+s +k +k+  +k+ +  ++   + +  e  ++ ++ ++s +++l  e+e l++e+++lk++L+e     ++   +d n+ Kg+
  EPX70491.1  19 NLKENVTDTIPPTVNSSSKKKKKNKKKKKPVTTQAN-GEHQENETSNNQKNEKDSLVSELLLENEDLKNEIDALKSTLEE-----TKRNYVDTNESKGH 111
                 555556666666666666655555544444443332.2333334445555666777899999*****************9.....666789******** PP

     DUF1640 117 ireelakleakiqelnnkidrev.salrteiEsv 149
                 i ee+ +l+++iq+l++  ++++ ++ r++ E  
  EPX70491.1 112 ILEEMDNLKQQIQDLKESNEIKLeEKTRAQEETQ 145
                 ***************9999999977777777754 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.3
     DUF1640 112 leKgrireelakleakiqelnnkidrev 139
                 +e  + r+e ++l++k+q+l++k ++ v
  EPX70491.1 156 NELVDSRDEVKELKEKLQDLDKKDETAV 183
                 4556789999999999999999977766 PP

>> TMF_TATA_bd  TATA element modulatory factor 1 TATA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   6.8         2     2e+03      55     106 ..      35      86 ..       9      87 .. 0.71
   2 ?   11.6  14.1   0.00025      0.25      32     106 ..      57     128 ..      49     136 .. 0.90
   3 ?    4.3   5.5     0.045        45      29      83 ..     138     182 ..     128     189 .. 0.47

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 2
  TMF_TATA_bd  55 eneelkelkkeleelekeleelqeryetlLellGeksEeveELraDvaDlKe 106
                  ++ ++k++kk+ + ++++ +  +++ et+     ek+  v EL  + +DlK+
   EPX70491.1  35 SSKKKKKNKKKKKPVTTQANGEHQENETSNNQKNEKDSLVSELLLENEDLKN 86 
                  3445566666677777888888888888888889999999999999999885 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 0.00025
  TMF_TATA_bd  32 keelerleaerdeareeivklmkeneelkelkkeleelekeleelqeryetlLellGeksEeveELraDvaDlKe 106
                  ++e+e+ +++++e  + + +l+ ene+l   k+e++ l++ lee ++ y  + e  G   Ee++ L++ ++DlKe
   EPX70491.1  57 HQENETSNNQKNEKDSLVSELLLENEDL---KNEIDALKSTLEETKRNYVDTNESKGHILEEMDNLKQQIQDLKE 128
                  6788999999999999999999888876...67899**************************************9 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.045
  TMF_TATA_bd  29 aslkeelerleaerdeareeivklmkeneelkelkkeleelekeleelqeryetl 83 
                  + ++ee ++l+   +++ +          el ++ +e++el+++l++l+++ et+
   EPX70491.1 138 TRAQEETQNLQDMLRNVGN----------ELVDSRDEVKELKEKLQDLDKKDETA 182
                  3333333333333333333..........34444445555555555555555554 PP

>> Golgin_A5  Golgin subfamily A member 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1  25.8   0.00079      0.79      36     152 ..      61     179 ..      44     198 .. 0.75

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00079
   Golgin_A5  36 eeglesstalsaeldelkqerdllreelqklnqqieqlrtelqdlea...qqqaeaeslreqlqeleeqleeerkakeeveaelerlkeelryleeelv 131
                 e++++ ++++   ++el  e++ l++e+ +l++++e+ + +  d+++   +  +e+++l++q+q+l+e  e + ++k ++++e ++l++ lr + +elv
  EPX70491.1  61 ETSNNQKNEKDSLVSELLLENEDLKNEIDALKSTLEETKRNYVDTNEskgHILEEMDNLKQQIQDLKESNEIKLEEKTRAQEETQNLQDMLRNVGNELV 159
                 3344445555666778888999999999999***99999887666551226799********************************************* PP

   Golgin_A5 132 rskatlqsrikdrekeieklr 152
                  s+ +++ ++k++ ++++k  
  EPX70491.1 160 DSRDEVK-ELKEKLQDLDKKD 179
                 9887653.4555555555543 PP

>> DUF4145  Domain of unknown function (DUF4145)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.2      0.28   2.8e+02      27      48 ..      75      95 ..      60     105 .. 0.73
   2 ?    6.6   4.1    0.0086       8.5      35      68 ..     108     158 ..      92     179 .. 0.72
   3 ?   -0.7   0.0       1.6   1.6e+03      33      49 ..     164     180 ..     157     189 .. 0.73

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.28
     DUF4145 27 kdkgiakgkdLknkiealvekg 48
                 ++   +++dLkn+i+al ++ 
  EPX70491.1 75 SELL-LENEDLKNEIDALKSTL 95
                4444.34559*******98875 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0086
     DUF4145  35 k.........dLknkiealvekgv........ipeklkelldairviGNdg 68 
                 +         +Lk++i++l e ++         +e++++l d +r++GN+ 
  EPX70491.1 108 SkghileemdNLKQQIQDLKESNEikleektrAQEETQNLQDMLRNVGNEL 158
                 2344555555799999999999986766666677888999999******86 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 1.6
     DUF4145  33 kgkdLknkiealvekgv 49 
                 + k+Lk+k+++l +k++
  EPX70491.1 164 EVKELKEKLQDLDKKDE 180
                 56789999999988873 PP

>> Syntaxin-18_N  SNARE-complex protein Syntaxin-18 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6  12.5    0.0046       4.5      17      75 ..      50     108 ..      18     123 .. 0.76
   2 ?   -0.7   0.2       1.7   1.7e+03      55      55 ..     144     144 ..     113     178 .. 0.62

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0046
  Syntaxin-18_N  17 sssskseekeakkrkkkrlkkskekdeFikeAkeilkhItkLrkfLleirkaYlnvrsh 75 
                     ++   e++e++++++++ +k +  +e + e  ++ + I+ L++ L e +++Y++++++
     EPX70491.1  50 TTQANGEHQENETSNNQKNEKDSLVSELLLENEDLKNEIDALKSTLEETKRNYVDTNES 108
                    22334445566677777788888888******************************543 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 1.7
  Syntaxin-18_N  55 I 55 
                     
     EPX70491.1 144 T 144
                    1 PP

>> DUF745  Protein of unknown function (DUF745)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9  10.4    0.0024       2.4      60     168 ..      70     178 ..      67     187 .. 0.86

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0024
      DUF745  60 KqqlveqleqelreaeavvqeekkslqsseanakaaakaakqaqqqlealkallkaakenlenaeqvaagaqqelaektqlleaAkkRveeLkkqlkea 158
                 K  lv +l  e ++ ++ ++  k+ l+++++n   +++++ ++ ++++ lk+ ++  ke+ e   + ++ aq+e ++ +++l +  + +   + ++ke 
  EPX70491.1  70 KDSLVSELLLENEDLKNEIDALKSTLEETKRNYVDTNESKGHILEEMDNLKQQIQDLKESNEIKLEEKTRAQEETQNLQDMLRNVGNELVDSRDEVKEL 168
                 889999*****************************************************999999999**************99988877777666666 PP

      DUF745 159 rkdlektkka 168
                 ++ l++  k+
  EPX70491.1 169 KEKLQDLDKK 178
                 6665555444 PP

>> Pox_A_type_inc  Viral A-type inclusion protein repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.6     0.054        54       6      23 .]      84     101 ..      82     101 .. 0.90
   2 ?    7.2   0.5    0.0049       4.9       1      14 [.     114     127 ..     114     129 .. 0.93
   3 ?    2.7   1.3      0.12   1.2e+02       2      15 ..     164     177 ..     162     178 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.054
  Pox_A_type_inc   6 lRsRIsDLErqLseCrrN 23 
                     l+++I  L++ L+e +rN
      EPX70491.1  84 LKNEIDALKSTLEETKRN 101
                     89************9998 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0049
  Pox_A_type_inc   1 rEmsrlRsRIsDLE 14 
                     +Em+ l+  I DL+
      EPX70491.1 114 EEMDNLKQQIQDLK 127
                     7************8 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.12
  Pox_A_type_inc   2 EmsrlRsRIsDLEr 15 
                     E+ +l+++  DL++
      EPX70491.1 164 EVKELKEKLQDLDK 177
                     89999999999987 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   4.6      0.43   4.3e+02      34      64 ..       4      46 ..       1      73 [. 0.66
   2 ?    4.8   5.8     0.043        43      15      64 ..      57     107 ..      44     114 .. 0.65
   3 ?    6.9  10.0    0.0095       9.5      13      76 ..     112     175 ..     105     179 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.43
                HHHHHHHHHHHHH..HHHHHH..............XXXXXXXXXXXX CS
        YabA 34 lleenaeLelene..klrerl..............eeeekkekekkk 64
                 l  n++L+ en+  +l+e++              +    k+++kkk
  EPX70491.1  4 SLTVNSDLQRENHenNLKENVtdtipptvnssskkK----KKNKKKK 46
                567799999998633699999999999887654221....1111111 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.043
                 HHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHHHHHHHHXXXXXXXXXXXX CS
        YabA  15 eqleelleeleelk.eelaelleenaeLeleneklrerleeeekkekekkk 64 
                 +q +e++++ ++ k + ++ell en++L+ e + l+++lee++++  ++++
  EPX70491.1  57 HQENETSNNQKNEKdSLVSELLLENEDLKNEIDALKSTLEETKRNYVDTNE 107
                 444444444444440557899******************766655444443 PP

  == domain 3  score: 6.9 bits;  conditional E-value: 0.0095
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHXXXXXXXXXXXXXXXXXXXXXXXX CS
        YabA  13 leeqleelleeleelkeelaelleenaeLeleneklrerleeeekkekekkkelsegkenLarl 76 
                 + e++++l++++++lke+ +  lee ++ + e ++l+++l++  ++  +++ e++e ke+L+ l
  EPX70491.1 112 ILEEMDNLKQQIQDLKESNEIKLEEKTRAQEETQNLQDMLRNVGNELVDSRDEVKELKEKLQDL 175
                 567899999*******************************888888888888888888888766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (262 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      4216  (0.23515); expected 358.6 (0.02)
Passed bias filter:                      918  (0.051202); expected 358.6 (0.02)
Passed Vit filter:                       199  (0.0110993); expected 17.9 (0.001)
Passed Fwd filter:                        78  (0.00435049); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 1.16u 0.36s 00:00:01.52 Elapsed: 00:00:00.55
# Mc/sec: 1422.46
//
Query:       EPX70492.1  [L=677]
Description: LEA domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.4e-32  110.1  11.5    8.1e-08   32.4   0.0    7.9  7  Ish1             Putative stress-responsive nuclear envelope 
    1.1e-05   25.4  12.7    0.00042   20.3  11.8    3.3  2  Apolipoprotein   Apolipoprotein A1/A4/E domain
    0.00064   19.4   0.4        8.4    6.2   0.2    4.7  4  HeH              HeH/LEM domain
     0.0022   18.1   0.9     0.0022   18.1   0.9    3.2  3  ApoLp-III        Apolipophorin-III precursor (apoLp-III)
  ------ inclusion threshold ------
      0.017   15.7  17.7        1.2    9.7   3.5    4.3  4  DUF883           Bacterial protein of unknown function (DUF88
       0.13   11.2   6.9       0.71    8.7   0.8    3.0  3  Spc7             Spc7 kinetochore protein
       0.46   11.0   4.7        7.1    7.2   1.0    3.3  3  Peptidase_C39_2  Peptidase_C39 like family
        0.6   10.2   9.0        5.1    7.2   0.5    3.2  3  DUF1664          Protein of unknown function (DUF1664)
       0.86   10.2  31.8       0.47   11.0   7.1    5.7  5  YtxH             YtxH-like protein
        1.8    8.5   7.1        8.6    6.3   0.2    4.2  5  ApoO             Apolipoprotein O
        5.3    7.4   7.1       0.44   10.9   0.2    2.4  2  DUF1178          Protein of unknown function (DUF1178)
        7.5    6.7   7.8         12    6.1   1.9    3.1  4  PT-VENN          Pre-toxin domain with VENN motif


Domain annotation for each model (and alignments):
>> Ish1  Putative stress-responsive nuclear envelope protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.027        40       9      19 ..      35      45 ..      31      53 .. 0.83
   2 !   16.1   0.0   6.9e-06      0.01       1      19 [.     127     145 ..     127     158 .. 0.81
   3 !   32.4   0.0   5.4e-11   8.1e-08       1      36 [.     186     220 ..     186     221 .. 0.95
   4 !   15.9   0.2   7.7e-06     0.012       4      36 ..     301     332 ..     301     333 .. 0.93
   5 !   20.7   0.0   2.5e-07   0.00037       2      37 .]     453     487 ..     452     487 .. 0.93
   6 !   11.9   0.1   0.00014      0.21       1      34 [.     500     536 ..     500     538 .. 0.93
   7 !    8.4   0.1    0.0018       2.6       4      17 ..     570     583 ..     569     604 .. 0.73

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.027
        Ish1  9 LkkWLdshGip 19
                +k WLd+h +p
  EPX70492.1 35 IKTWLDEHSVP 45
                79******998 PP

  == domain 2  score: 16.1 bits;  conditional E-value: 6.9e-06
        Ish1   1 FdtWSdsdLkkWLdshGip 19 
                 Fd W+ds+L+++L+ + ++
  EPX70492.1 127 FDAWNDSQLRAFLARYSDA 145
                 9*************99877 PP

  == domain 3  score: 32.4 bits;  conditional E-value: 5.4e-11
        Ish1   1 FdtWSdsdLkkWLdshGipvskaastRdeLlklard 36 
                 +dtWSd++L+ WL + G+p  +a  tR ++l ++++
  EPX70492.1 186 YDTWSDNELRTWLHDMGVPI-QAHETRPHILSKVKE 220
                 9******************5.9999*********97 PP

  == domain 4  score: 15.9 bits;  conditional E-value: 7.7e-06
        Ish1   4 WSdsdLkkWLdshGipvskaastRdeLlklard 36 
                 WS+s Lk++Ld  Gi   +++s  d+L + ar+
  EPX70492.1 301 WSESGLKAYLDARGINI-YQPSALDKLWASARR 332
                 ****************5.*******99999986 PP

  == domain 5  score: 20.7 bits;  conditional E-value: 2.5e-07
        Ish1   2 dtWSdsdLkkWLdshGipvskaastRdeLlklardn 37 
                 + W +s L+++L   G+pv +++s++ +L+  +r++
  EPX70492.1 453 EKWQESKLREFLYLRGVPV-PKKSNKQKLIGIVRKH 487
                 68****************8.**********999986 PP

  == domain 6  score: 11.9 bits;  conditional E-value: 0.00014
        Ish1   1 FdtWSdsdLkkWLdshGipvskaas.....tRdeLlkla 34 
                 F+t S  +L +W+ +++  + ++++     +R++L++ a
  EPX70492.1 500 FNTLSSKELSSWIQEFK--KYYHGKlhpskNREHLVQNA 536
                 9****************..78999999999******998 PP

  == domain 7  score: 8.4 bits;  conditional E-value: 0.0018
        Ish1   4 WSdsdLkkWLdshG 17 
                 WS++d+k+ L+++G
  EPX70492.1 570 WSNEDIKSALSEYG 583
                 ************** PP

>> Apolipoprotein  Apolipoprotein A1/A4/E domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0         1   1.5e+03      57      97 ..      90     104 ..      82     144 .. 0.56
   2 !   20.3  11.8   2.8e-07   0.00042      21     188 ..     230     439 ..     209     441 .. 0.66

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 1
                     HHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCHHCCHHCH CS
  Apolipoprotein  57 rdevqeqlgqnleelrqrlapyteelrerlaadaeelqeql 97 
                      d ++e                          +++++ +++
      EPX70492.1  90 FDSAKE--------------------------KMNKASQHI 104
                     222222..........................333333333 PP

  == domain 2  score: 20.3 bits;  conditional E-value: 2.8e-07
                     HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCHHCCHHCHCCHCHH............ CS
  Apolipoprotein  21 aplaqelrdrlskeleelrarlraeleevrarlepyrdevqeqlgqnleelrqrlapyteelrerlaadaeelqeqlavyaee............ 103
                     +p    ++d + k           +++e  +++  y+d++ ++ ++ +e   ++l+++ e++ + l+++a++l e+ + +++             
      EPX70492.1 230 KP----VVDSIKK-----------DTTEKADKVGKYADDASKKAEDYAEYASKKLTEAGENVGDDLQKKADKLHEASQGKGRVatwwsesglkay 309
                     22....3555555...........55555555555555555555555555555555555555555555555555555544444555555777777 PP

                     .............................................HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH-----..-----SS CS
  Apolipoprotein 104 .............................................lrerlerhvealkarlapyveelrqklaerleelkeslaphaeeveerls 153
                                                                  + ++++ +v+++ +  +  + ++ ++   ++ ++k++++ ++ +   ++s
      EPX70492.1 310 ldarginiyqpsaldklwasarrqyylrtngyeslkatvkehvssATDSASGAVSDVASDASTAATDVYHGATTNANQIKDEIKHAKSSNARAVS 404
                     777778888888888888888888888888888855554444444555555556666666666666666999999*******999988888999* PP

                     SHHHHHHHTS-TTSHHHHHS--XXXXXXXXXXXXX CS
  Apolipoprotein 154 srveelrekleeqaeelrerleanleelkaqleal 188
                     s+  +l+++++ +a+   ++l++ +e++kaq ea+
      EPX70492.1 405 SKTGDLKHRASNAASYASDKLDQGSEKIKAQKEAA 439
                     *******************************9876 PP

>> HeH  HeH/LEM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0     0.034        51       6      20 ..      32      46 ..      32      50 .. 0.88
   2 ?    3.2   0.0      0.05        74       8      23 ..     193     208 ..     192     209 .. 0.90
   3 !    6.2   0.2    0.0056       8.4       8      35 .]     459     486 ..     458     486 .. 0.92
   4 ?   -0.9   0.0      0.91   1.4e+03      20      26 ..     667     673 ..     666     675 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.034
         HeH  6 VaqLRriLvehgvey 20
                V+ ++++L eh v+y
  EPX70492.1 32 VSAIKTWLDEHSVPY 46
                6779*********99 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.05
         HeH   8 qLRriLvehgveyPsn 23 
                 +LR++L+  gv++ ++
  EPX70492.1 193 ELRTWLHDMGVPIQAH 208
                 8**********99886 PP

  == domain 3  score: 6.2 bits;  conditional E-value: 0.0056
         HeH   8 qLRriLvehgveyPsnaKKadLveLfnd 35 
                 +LR+ L   gv++P ++ K +L+ ++++
  EPX70492.1 459 KLREFLYLRGVPVPKKSNKQKLIGIVRK 486
                 89999999***************99975 PP

  == domain 4  score: -0.9 bits;  conditional E-value: 0.91
         HeH  20 yPsnaKK 26 
                 ++snaKK
  EPX70492.1 667 VDSNAKK 673
                 69***** PP

>> ApoLp-III  Apolipophorin-III precursor (apoLp-III)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       3.1   4.6e+03     107     128 ..      83     104 ..      76     120 .. 0.56
   2 !   18.1   0.9   1.5e-06    0.0022       6      77 ..     217     290 ..     208     299 .. 0.81
   3 ?    0.4   5.6      0.44   6.5e+02      27     127 ..     344     449 ..     338     459 .. 0.65

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 3.1
   ApoLp-III 107 aeslkensqeakeklakaikqa 128
                 +++ ++    akek++ka + +
  EPX70492.1  83 GKKTSPYFDSAKEKMNKASQHI 104
                 5555555555555555554433 PP

  == domain 2  score: 18.1 bits;  conditional E-value: 1.5e-06
   ApoLp-III   6 elqksvkkqlnlpsqeevvetiKensenlvdqlkqvikslqeelkk....ksdeleealkevkkkieetadklsee 77 
                  +++++ +q  l s + vv  iK+ +++ +d++ ++++ ++ ++ +    +s +l+ea ++v +++++ adkl e+
  EPX70492.1 217 KVKETMSEQ--LESGKPVVDSIKKDTTEKADKVGKYADDASKKAEDyaeyASKKLTEAGENVGDDLQKKADKLHEA 290
                 556667777..56********************99987776555442224899999*****************995 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.44
   ApoLp-III  27 iKensenlvdqlkqv.ikslqeelkkksdeleealkevkkkieetadklseenPevkkkaqelqekvQsgvqslvke.sqkla...eslkensqeakek 120
                 +K  +++ v+++ +  ++ +++ + ++s +++ +   + ++ +++ d+++ +++  +++++     +  + ++ ++  s+kl+   e++k+++++a+ k
  EPX70492.1 344 LKATVKEHVSSATDSaSGAVSDVASDASTAATDVYHGATTNANQIKDEIKHAKSSNARAVSSKTGDLKHRASNAASYaSDKLDqgsEKIKAQKEAASSK 442
                 555555555555443044555555567778888888889999999999999888888888888888877777777641445532226777777777777 PP

   ApoLp-III 121 lakaikq 127
                 +++++ +
  EPX70492.1 443 IRDLVDE 449
                 7776654 PP

>> DUF883  Bacterial protein of unknown function (DUF883)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0         2     3e+03      34      65 ..      84     115 ..      53     125 .. 0.65
   2 ?    8.5   1.4    0.0021       3.1      10      62 ..     232     284 ..     208     294 .. 0.60
   3 ?    4.3   0.3     0.042        63      27      65 ..     339     377 ..     322     385 .. 0.81
   4 ?    9.7   3.5   0.00083       1.2       6      72 ..     384     450 ..     379     454 .. 0.92

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 2
      DUF883  34 erleerlerarerlrdaeeavaerakeaaeaa 65 
                 ++ + ++++a+e++++a++++ + a+ a  ++
  EPX70492.1  84 KKTSPYFDSAKEKMNKASQHIGNVASGAKGTT 115
                 55555666777777777776665555555554 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0021
      DUF883  10 lladleellkeaadeageeaeelRerleerlerarerlrdaeeavaerakeaa 62 
                 +++++++ + e+ad+ g++a+++ +++e+++e a ++l++a e+v +  ++ a
  EPX70492.1 232 VVDSIKKDTTEKADKVGKYADDASKKAEDYAEYASKKLTEAGENVGDDLQKKA 284
                 34444444455566666666666666666666666666666666555555555 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.042
      DUF883  27 eeaeelRerleerlerarerlrdaeeavaerakeaaeaa 65 
                 + +e+l++ ++e++++a ++++ a  +va  a+ aa ++
  EPX70492.1 339 NGYESLKATVKEHVSSATDSASGAVSDVASDASTAATDV 377
                 678899999999999999999999999988888887655 PP

  == domain 4  score: 9.7 bits;  conditional E-value: 0.00083
      DUF883   6 eleslladleellkeaadeageeaeelRerleerlerarerlrdaeeavaerakeaaeaaddyVren 72 
                 + +++ +++++  ++ a+   +++ +l+ r++++++ a ++l++ +e+++++ ++a+ + +d V en
  EPX70492.1 384 NANQIKDEIKHAKSSNARAVSSKTGDLKHRASNAASYASDKLDQGSEKIKAQKEAASSKIRDLVDEN 450
                 56889999999999999***********************************************998 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.4     0.012        18     155     219 ..     223     287 ..     212     303 .. 0.68
   2 ?    8.7   0.8   0.00048      0.71     163     236 ..     386     460 ..     334     464 .. 0.85
   3 ?   -0.7   0.0      0.36   5.3e+02      64      81 ..     502     519 ..     489     521 .. 0.81

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.012
        Spc7 155 kelLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekk 219
                 +e+Le+ +  +d+++++++e+ +++ + +++  ++ae+ +++ +++L e+ e++ +  ++ + k 
  EPX70492.1 223 SEQLESGKPVVDSIKKDTTEKADKVGKYADDASKKAEDYAEYASKKLTEAGENVGDDLQKKADKL 287
                 46777777778888888888888888888888888888888888888877776654444443333 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00048
        Spc7 163 eel.dellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleeki 236
                 +++ de++++ +++  +++++  +l+ +a + +s+ +++L +  e+++++k+  ++k ++l + +   +++e+k+
  EPX70492.1 386 NQIkDEIKHAKSSNARAVSSKTGDLKHRASNAASYASDKLDQGSEKIKAQKEAASSKIRDLVDENVLEKWQESKL 460
                 34437777888888889999999******************************9999999988766666666555 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.36
        Spc7  64 qhscreLkkyisegrkii 81 
                 + s++eL+++i+e +k +
  EPX70492.1 502 TLSSKELSSWIQEFKKYY 519
                 6799*********99875 PP

>> Peptidase_C39_2  Peptidase_C39 like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0     0.069     1e+02      83     110 ..     213     238 ..     165     266 .. 0.68
   2 ?    7.2   1.0    0.0048       7.1      19      98 ..     370     449 ..     366     452 .. 0.62
   3 ?   -2.7   0.0       5.3   7.9e+03      61      82 ..     566     587 ..     538     601 .. 0.69

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.069
  Peptidase_C39_2  83 dtrgssieevkkeidagkPvvvsvttfk 110
                      ++ ++  e++ +++++gkPvv s++  k
       EPX70492.1 213 HILSKVKETMSEQLESGKPVVDSIK--K 238
                      3445555667777888*****9997..3 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0048
  Peptidase_C39_2  19 tslamvlsylgkkvtqnelakelktnssgdpntgfvgnit...dksglgvynepivklaekyglkvsdtrgssieevkkeida 98 
                      +s+a +  y+g + + n++ +e+k+ +s++ +   v++ t   ++  + + +++ +kl +    k++ ++++  +++ + +d+
       EPX70492.1 370 ASTAATDVYHGATTNANQIKDEIKHAKSSNARA--VSSKTgdlKHRASNAASYASDKLDQGSE-KIKAQKEAASSKIRDLVDE 449
                      899***********************9443333..3322222334444444444444333333.4666666666666666665 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 5.3
  Peptidase_C39_2  61 sglgvynepivklaekyglkvs 82 
                       + g +ne i+++ ++yg+++ 
       EPX70492.1 566 EYAGWSNEDIKSALSEYGEAIN 587
                      4567788888888888887433 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.5    0.0034       5.1      39     104 ..     215     281 ..     210     294 .. 0.70
   2 ?   -1.7   0.1       1.8   2.8e+03      60     105 ..     348     394 ..     338     401 .. 0.59
   3 ?    6.9   0.4     0.004         6      39      75 ..     414     451 ..     410     462 .. 0.80

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0034
     DUF1664  39 lsdavesvskqleqvseslaatkrhLssridrvdkkldeqkeiskeike.evtevredlseigedve 104
                 ls++ e++s+qle+ +  + + k++ +++ d+v+k  d+ ++ +++ +e   +++ e  +++g+d++
  EPX70492.1 215 LSKVKETMSEQLESGKPVVDSIKKDTTEKADKVGKYADDASKKAEDYAEyASKKLTEAGENVGDDLQ 281
                 788999***************************9998877665554433122334444444444443 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.8
     DUF1664  60 tkrhLssridrvdkkldeqkeiskeikeev.tevredlseigedves 105
                 +k+h ss  d+    + +++  ++  + +v + +  + ++i++++++
  EPX70492.1 348 VKEHVSSATDSASGAVSDVASDASTAATDVyHGATTNANQIKDEIKH 394
                 46677777777666666655544444444424566777777777665 PP

  == domain 3  score: 6.9 bits;  conditional E-value: 0.004
     DUF1664  39 lsdavesvskqleqvseslaatkrhLssridrv.dkkl 75 
                  s+a +  s +l+q se+++a+k+  ss+i  + d+++
  EPX70492.1 414 ASNAASYASDKLDQGSEKIKAQKEAASSKIRDLvDENV 451
                 58999999**********************76515554 PP

>> YtxH  YtxH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0       1.1   1.7e+03      30      41 ..      93     104 ..      54     128 .. 0.60
   2 ?    3.4   0.1     0.075   1.1e+02      35      69 ..     216     246 ..     161     248 .. 0.67
   3 ?   11.0   7.1   0.00032      0.47      28      72 ..     245     289 ..     238     291 .. 0.92
   4 ?    3.8   1.6     0.057        85      35      64 ..     353     393 ..     339     407 .. 0.51
   5 ?    6.4   2.2    0.0086        13      30      71 ..     403     447 ..     397     450 .. 0.61

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 1.1
        YtxH  30 lkekaddlkeka 41 
                 +kek++++++++
  EPX70492.1  93 AKEKMNKASQHI 104
                 223333333333 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.075
        YtxH  35 ddlkekakelleeakekakekaedlkekvkekade 69 
                 +++ke + e l    e +k  ++ +k++ +ekad+
  EPX70492.1 216 SKVKETMSEQL----ESGKPVVDSIKKDTTEKADK 246
                 23333333332....22256666666666666665 PP

  == domain 3  score: 11.0 bits;  conditional E-value: 0.00032
        YtxH  28 kdlkekaddlkekakelleeakekakekaedlkekvkekadelke 72 
                 +++ ++add+++ka++++e a++k +e +e++ +++++kad+l e
  EPX70492.1 245 DKVGKYADDASKKAEDYAEYASKKLTEAGENVGDDLQKKADKLHE 289
                 689999***********************************9976 PP

  == domain 4  score: 3.8 bits;  conditional E-value: 0.057
        YtxH  35 ddlkekakelleeakeka...........kekaedlkekvk 64 
                 + + ++a  ++ ++++ a           + +a+++k+++k
  EPX70492.1 353 SSATDSASGAVSDVASDAstaatdvyhgaTTNANQIKDEIK 393
                 44444444444444444411112222222555555555554 PP

  == domain 5  score: 6.4 bits;  conditional E-value: 0.0086
        YtxH  30 lkekaddlkekakelleeakeka...kekaedlkekvkekadelk 71 
                 ++ k+ dlk +a +++  a++k    +ek+++ ke++++k+ +l+
  EPX70492.1 403 VSSKTGDLKHRASNAASYASDKLdqgSEKIKAQKEAASSKIRDLV 447
                 456666777777777666655555556666666666666655555 PP

>> ApoO  Apolipoprotein O
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0       1.1   1.6e+03      25      57 ..      84     116 ..      77     126 .. 0.75
   2 ?   -3.4   0.0       5.8   8.7e+03      21      49 ..     161     189 ..     150     191 .. 0.82
   3 ?   -0.9   0.1      0.98   1.5e+03      10      36 ..     241     267 ..     210     291 .. 0.53
   4 ?    2.2   0.0      0.11   1.6e+02      13      63 ..     320     370 ..     314     383 .. 0.81
   5 ?    6.3   0.2    0.0058       8.6       9      67 ..     396     452 ..     384     455 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 1.1
        ApoO  25 kslepytsavqdelnkvkskvetaeqsvtdtia 57 
                 k ++py++ +++++nk+++ + +  +  + t +
  EPX70492.1  84 KKTSPYFDSAKEKMNKASQHIGNVASGAKGTTS 116
                 667899999999999999988887776666655 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 5.8
        ApoO  21 rslRkslepytsavqdelnkvkskvetae 49 
                 +slRk + ++++ +  +l ++ ++v++++
  EPX70492.1 161 SSLRKLAVKEYKLLVTKLGETGDWVYDTW 189
                 68999999999999999999999988876 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.98
        ApoO  10 eeptdrLeegvrslRkslepytsavqd 36 
                 +e++d++ ++   + k +e+y++ +++
  EPX70492.1 241 TEKADKVGKYADDASKKAEDYAEYASK 267
                 233333333333333333444433333 PP

  == domain 4  score: 2.2 bits;  conditional E-value: 0.11
        ApoO  13 tdrLeegvrslRkslepytsavqdelnkvkskvetaeqsvtdtiasLkepp 63 
                 +++L +  +s+R++ +  t+ +++   +vk+ v +a  s + +++ ++++ 
  EPX70492.1 320 PSALDKLWASARRQYYLRTNGYESLKATVKEHVSSATDSASGAVSDVASDA 370
                 458888899999999999999999999999999999999999998888765 PP

  == domain 5  score: 6.3 bits;  conditional E-value: 0.0058
        ApoO   9 seeptdrLeegvrslRkslepytsavqdelnkvkskvetaeqsvtdtiasLkeppedll 67 
                 ++++++++ ++ + l + +++ +s ++d+l++ ++k++  ++  +++i  L +  e++l
  EPX70492.1 396 KSSNARAVSSKTGDLKHRASNAASYASDKLDQGSEKIKAQKEAASSKIRDLVD--ENVL 452
                 466788899999999************************************99..5655 PP

>> DUF1178  Protein of unknown function (DUF1178)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.2    0.0003      0.44      45     119 ..     219     293 ..     214     320 .. 0.79
   2 ?   -2.2   2.2       3.3   4.9e+03      48      67 ..     399     418 ..     347     453 .. 0.50

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.0003
     DUF1178  45 kalmaprvakskkkaaeaaeaeaaaaaakaaaaaekekeleaalaelrrkveknsedVGerFaeeArkihygeae 119
                 k+ m+ +++++k   ++ +++++++a++  + a++++k++e+ ++ +++k+++  e+VG++  ++A k+h+  + 
  EPX70492.1 219 KETMSEQLESGKPVVDSIKKDTTEKADKVGKYADDASKKAEDYAEYASKKLTEAGENVGDDLQKKADKLHEASQG 293
                 55667777777777666666666666666666688899999999999***********************97765 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 3.3
     DUF1178  48 maprvakskkkaaeaaeaea 67 
                  a +v++++ + +++a+++a
  EPX70492.1 399 NARAVSSKTGDLKHRASNAA 418
                 22222222222222222222 PP

>> PT-VENN  Pre-toxin domain with VENN motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.2       8.2   1.2e+04      10      20 ..       4      14 ..       4      16 .. 0.77
   2 ?    2.5   0.1       0.1   1.5e+02       9      33 ..      94     117 ..      91     119 .. 0.80
   3 ?    6.1   1.9    0.0081        12       4      34 ..     344     374 ..     342     387 .. 0.75
   4 ?   -2.7   0.0       4.5   6.7e+03      44      51 ..     497     504 ..     493     505 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 8.2
     PT-VENN 10 qtvsalstlaa 20
                q++  lstlaa
  EPX70492.1  4 QQLFILSTLAA 14
                66778999998 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.1
     PT-VENN   9 KqtvsalstlaaGlaGgvvggtlad 33 
                 K++   +s+ ++ +a+g+ g t++d
  EPX70492.1  94 KEKMNKASQHIGNVASGAKG-TTSD 117
                 6777789**********999.6565 PP

  == domain 3  score: 6.1 bits;  conditional E-value: 0.0081
     PT-VENN   4 LteeEKqtvsalstlaaGlaGgvvggtlada 34 
                 L +  K++vs++   a+G+++ v+++ ++ a
  EPX70492.1 344 LKATVKEHVSSATDSASGAVSDVASDASTAA 374
                 666679999999999******9999544332 PP

  == domain 4  score: -2.7 bits;  conditional E-value: 4.5
     PT-VENN  44 AVeNNfLs 51 
                 AV +N Ls
  EPX70492.1 497 AVYFNTLS 504
                 9******8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (677 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1583  (0.0882927); expected 358.6 (0.02)
Passed bias filter:                      632  (0.0352502); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.79u 0.33s 00:00:01.12 Elapsed: 00:00:00.50
# Mc/sec: 4073.20
//
Query:       EPX70493.1  [L=725]
Description: actin-like protein Arp5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.3e-65  221.6   0.0    1.2e-37  129.5   0.0    2.4  2  Actin            Actin
  ------ inclusion threshold ------
       0.08   13.1   7.1       0.17   12.1   7.1    1.5  1  Cob_adeno_trans  Cobalamin adenosyltransferase
      0.095   12.7   1.5        6.7    6.7   0.8    2.7  2  DUF3793          Protein of unknown function (DUF3793)


Domain annotation for each model (and alignments):
>> Actin  Actin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.5   0.0   2.1e-41   1.2e-37       6     200 ..      28     224 ..      23     259 .. 0.88
   2 !   89.8   0.0   2.3e-29   1.4e-25     269     403 ..     592     716 ..     478     720 .. 0.91

  Alignments for each domain:
  == domain 1  score: 129.5 bits;  conditional E-value: 2.1e-41
       Actin   6 avVlDnGssttraGyagedaPkavipslvgkprgrkvea.klyvgdealtkrpelev.rspvedGvvedwdaveelwehvlkeelkvdpeehpllltep 102
                  +V+DnGs  +raG++ge+ P++ + +l+ ++r+rk +    +vg++ l +++  ++ rsp e+ v+++wd++e ++++++ + l +++++hp+ +tep
  EPX70493.1  28 PIVIDNGSWQLRAGWGGEKDPRLQFDNLMSRYRDRKLSRtSTLVGNDTLIEVGARSIaRSPFEQNVINNWDVMESVLDYTFLK-LGIEHQDHPICMTEP 125
                 79********************************997665899****888766555527899*******************98.*************** PP

       Actin 103 plnppkqrekalEivfEkfkvpalylaksavlsafasgks..tglvvDsGasvtsvvpVldGyvLkkairrsdlgGkaLteqlkellssknvevtpryl 199
                  +np+  r  ++E++fE ++vp++  + +   s + ++ +  +g+ +++G+s+++v pVldG+ L ++ +r++ gG   +++l +l+++k   + p  +
  EPX70493.1 126 FMNPTYSRSTMTELLFELYQVPSVAYGVDGLYSFYHNAGKesSGIAINLGYSSSHVLPVLDGQKLAHEAKRVSWGGASSSSYLLRLFQMK-YPFFPIKM 223
                 ***********************************875332499*********************************************6.44444444 PP

       Actin 200 i 200
                 +
  EPX70493.1 224 L 224
                 3 PP

  == domain 2  score: 89.8 bits;  conditional E-value: 2.3e-29
       Actin 269 eiklgeeRfkvpEiLFdpsligsesaleeekskllgiselivaainacdvdlrpeLlanivvtGGnsllpglteRlekelaqlaskgvkvkiiapeeer 367
                 ++ ++ eR +vpE+LF+ps++g ++a         gi e+++  +++   +   +L++niv+tGG s +pg+++R+e+el+ +++ g+ +++++++ ++
  EPX70493.1 592 QLHFNIERLRVPEVLFTPSIVGLDQA---------GIVEIVRGILQRHTQEESDKLIKNIVLTGGLSKFPGISKRVENELMSVLPVGSPLNVYSAS-DP 680
                 678999********************.........*************************************************************.** PP

       Actin 368 kysaWiGGSiLAslgtfqqlwvskqEYeEqGssvve 403
                    aW G+S ++ +++f+++ +s++EY+E+G+++ +
  EPX70493.1 681 LLDAWKGASEWSVTEEFKKISISRAEYQEKGPDYLK 716
                 ********************************9876 PP

>> Cob_adeno_trans  Cobalamin adenosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   7.1   2.8e-05      0.17      50     142 ..     272     372 ..     243     391 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.8e-05
                      THHHHHHHHHHHHHHHHHHHHHHT......-BTCCG-S--HHHHHHHHHHHHHHH.HHS-.-EESEEES-SSHHHHHHHHHHHHHHHHHHHHHH CS
  Cob_adeno_trans  50 eeelkeaLeeiqneLfdlgaelatp.....ekkkekkkiteeeveelekeidele.aelp.plksfilpggspaaaalhvaRtvcRraERavve 136
                      +e+ +e+Le+i ++  + g  l ++     ++k ++++ + +++++l+++  +l+  e++  l++  +  + ++ a+l+ + + +RraER +++
       EPX70493.1 272 QEKSQEELEQIAERKRESGRRLQAQaaikrKEKAAEREKELNTLQRLQEQSGTLSkREYQrALQEAGFSDEAQLKAQLKNVQSRIRRAERDALR 365
                      67889999999999999999997766654322222222222346777777777774333324899999999*********************99 PP

                      HHHHS.. CS
  Cob_adeno_trans 137 laeee.v 142
                       ++++ +
       EPX70493.1 366 QQQNQqE 372
                      9886542 PP

>> DUF3793  Protein of unknown function (DUF3793)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.8    0.0011       6.7      30      94 ..     293     358 ..     264     388 .. 0.80
   2 ?    3.7   0.0    0.0096        57     128     155 ..     517     544 ..     505     554 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0011
     DUF3793  30 lleekgislkvlkekekkalilvyreekLeeylsdeevrefLkklgY.esesleelleeLkkrlee 94 
                 l ++  i+ k  + +++k l  + r ++ + +ls++e +++L+++g+ ++ +l++ l++ ++r+++
  EPX70493.1 293 LQAQAAIKRKEKAAEREKELNTLQRLQEQSGTLSKREYQRALQEAGFsDEAQLKAQLKNVQSRIRR 358
                 44455666666666677777777788888899***************9889************986 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.0096
     DUF3793 128 yWkvYgneeeakklfekykkckeellel 155
                  WkvY+++ +a++l ++ ++  ee+++l
  EPX70493.1 517 DWKVYHDVLNAEQLEDEGNRLVEEIYAL 544
                 5***********9998888777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (725 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1722  (0.0960455); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.76u 0.32s 00:00:01.08 Elapsed: 00:00:00.47
# Mc/sec: 4622.06
//
Query:       EPX70494.1  [L=309]
Description: hypothetical protein SOCG_04712 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.1e-49  167.5   3.4    2.6e-49  166.3   3.4    1.7  1  Kin17_mid    Domain of Kin17 curved DNA-binding protein
    0.00011   22.4   2.4    0.00028   21.1   2.4    1.8  1  zf-met       Zinc-finger of C2H2 type
    0.00056   20.1   1.1     0.0015   18.7   1.1    1.9  1  zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
     0.0016   18.4   0.7     0.0022   17.8   0.7    1.3  1  MCPVI        Minor capsid protein VI
  ------ inclusion threshold ------
        1.3    9.4  12.8      0.091   13.1   1.1    3.0  3  zf-C2H2_2    C2H2 type zinc-finger (2 copies)
        2.3    8.7   7.5        1.6    9.2   2.6    2.3  2  SIT          SHP2-interacting transmembrane adaptor protein, 
        2.7    8.9  14.4       0.15   12.9   7.3    2.4  2  PAPA-1       PAPA-1-like conserved region


Domain annotation for each model (and alignments):
>> Kin17_mid  Domain of Kin17 curved DNA-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.3   3.4     1e-52   2.6e-49       1     126 []      52     177 ..      52     177 .. 0.99

  Alignments for each domain:
  == domain 1  score: 166.3 bits;  conditional E-value: 1e-52
   Kin17_mid   1 rqleliaentkkvieeyskeFekdFlklLrtrhgekkveankvYqeyiqdkdHvhmNaTkwtsLteFvkyLgkegkvkveetekgllisyidrspeale 99 
                 r+++liae++ k+i+++s++F +dF++lLrt+hgekk++ nk+Yqeyi+dk+HvhmNaT+w++L+eF+k+Lg++++++veetekg++isyid++peal+
  EPX70494.1  52 RRISLIAEDPGKHIRDFSNQFLQDFVSLLRTTHGEKKIQFNKFYQEYIRDKNHVHMNATRWHTLSEFCKFLGRQSICRVEETEKGFFISYIDKNPEALR 150
                 67899********************************************************************************************** PP

   Kin17_mid 100 rkeklekkekaekedeereekllekqi 126
                 r+e+++k+e +ek++ee++ +ll++qi
  EPX70494.1 151 RSEANRKREIQEKSEEETHLRLLNEQI 177
                 *************************98 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   2.4   1.1e-07   0.00028       1      23 [.      26      48 ..      26      50 .. 0.94

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 1.1e-07
      zf-met  1 fyCelCnvtfnsesqlksHlqGK 23
                +yC +C++++ +e+ +k+H q+ 
  EPX70494.1 26 WYCTACQKQMRDENGFKCHTQSE 48
                9********************95 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   1.1     6e-07    0.0015       2      26 ..      26      50 ..      25      51 .. 0.93

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 6e-07
                 CBBTTTTBBBSSHHHHHCCTTSHHH CS
  zf-C2H2_jaz  2 fYCvlCdKyFksenaldnHlkSKkH 26
                 +YC +C+K++ +en ++ H  S  H
   EPX70494.1 26 WYCTACQKQMRDENGFKCHTQSEGH 50
                 8******************999888 PP

>> MCPVI  Minor capsid protein VI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.7   8.8e-07    0.0022     110     198 ..     161     258 ..      95     267 .. 0.76

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 8.8e-07
                 XXXXXXXXX.XXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXX......XXXXXXXXXXXXXX CS
       MCPVI 110 eerpatqeeleaLiaald.pkdeeavkqgeptvePiaPeaksvl.vPvtldlpesvd.evkkPvlssesavvvsrPsr......lelrraaskrrrkR 198
                 +e+   + +l+ L ++++ +k+   v+q e+  +P+  e + +    + l+l  + + + +kP++ss+s+ v s+P +        l   +sk+r+k 
  EPX70494.1 161 QEKSEEETHLRLLNEQIQrAKEAYNVQQKEEEKRPVNHELQRPEnQGIHLHLSSAHSsTTEKPSISSSSSSVSSKPQTptvppsTALFSMPSKPRSKN 258
                 344445667888999**98888889************9988776588888887754438999***999999998887611111134555567777775 PP

>> zf-C2H2_2  C2H2 type zinc-finger (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   1.1   3.6e-05     0.091      50      78 ..      25      53 ..       9      75 .. 0.79
   2 ?    4.0   0.7     0.025        64      64      95 ..      93     121 ..      71     126 .. 0.79
   3 ?   -2.6   0.2       2.7     7e+03      66      95 ..     160     186 ..     152     192 .. 0.53

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 3.6e-05
   zf-C2H2_2 50 kleClyCekefkslealreHmkkkgHcki 78
                ++ C  C+k+ ++ + ++ H +++gH + 
  EPX70494.1 25 RWYCTACQKQMRDENGFKCHTQSEGHVRR 53
                689***********************986 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.025
   zf-C2H2_2  64 ealreHmkkkgHckineeeeeekkeiekfydf 95 
                 + ++e +++k+H  +n +   +++++++f +f
  EPX70494.1  93 KFYQEYIRDKNHVHMNAT---RWHTLSEFCKF 121
                 5578999*******9764...58888888777 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 2.7
   zf-C2H2_2  66 lreHmkkkgHckineeeeeekkeiekfydf 95 
                 ++e  +++ H ++ +   e+ +  ++ y++
  EPX70494.1 160 IQEKSEEETHLRLLN---EQIQRAKEAYNV 186
                 555555666666643...334444555555 PP

>> SIT  SHP2-interacting transmembrane adaptor protein, SIT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   2.6   0.00062       1.6      25     109 ..     177     264 ..     172     270 .. 0.86
   2 ?    4.2   0.3     0.022        56      56     102 ..     260     303 ..     253     305 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00062
         SIT  25 kkrqkkaaeysseq.isredeevlqPieddicYanLnlqqtgtspesseekcyeqmkssaqrsqneve..yvtmaplpreqisYAsLd 109
                  +r k+a+++++++  +r+ +++lq +e++    +L+  +++t++++s  + +++++s++q  +       ++m + pr +  +AsL+
  EPX70494.1 177 IQRAKEAYNVQQKEeEKRPVNHELQRPENQGIHLHLSSAHSSTTEKPSISSSSSSVSSKPQTPTVPPStaLFSMPSKPRSKNVFASLN 264
                 68999999998888789999999**556777799**************************9999877767889999999999999997 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.022
         SIT  56 YanLnlqqtgtspesseekcyeqmkssaqrsqneveyvtmaplpreq 102
                 +a Ln  q+  ++++++e+  ++  ++++r +  +e ++m++++re+
  EPX70494.1 260 FASLNRPQK--KHSDISENSPKK-DNNTKRPRSAMEEIIMQETAREK 303
                 788888776..666777777777.66888999999*******99985 PP

>> PAPA-1  PAPA-1-like conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   7.3   5.7e-05      0.15       3      66 ..     148     204 ..     147     226 .. 0.72
   2 ?   -0.8   0.6       1.1   2.9e+03      54      68 ..     276     291 ..     252     308 .. 0.53

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 5.7e-05
                 XXHHHHHHHHHHHHHHHHHHHHHHXHHHHHHXXXXXXXXXX..XXXXXXXXXXXXXXXXXXX-- CS
      PAPA-1   3 alrraEmarrRknqsekrleeekaeTInkLLkkqagkkkkkkkakaaaeaeeeeeeaeeaerpa 66 
                 alrr+E+ r+R  q ek     + eT  +LL++q +++k+  + ++++e++ + +  +e +rp+
  EPX70494.1 148 ALRRSEANRKREIQ-EKS----EEETHLRLLNEQIQRAKEAYNVQQKEEEKRPVN--HELQRPE 204
                 89*******99876.444....446888*************77666555555555..3444443 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 1.1
                 XXXXXXXXXXX--S.- CS
      PAPA-1  54 eeeeeaeeaerpap.l 68 
                 ++ +++++++rp+  +
  EPX70494.1 276 NSPKKDNNTKRPRSaM 291
                 3333333333433332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (309 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2127  (0.118635); expected 358.6 (0.02)
Passed bias filter:                      621  (0.0346366); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.53u 0.32s 00:00:00.85 Elapsed: 00:00:00.48
# Mc/sec: 1922.70
//
Query:       EPX70495.1  [L=229]
Description: Der1-like family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-35  122.7   6.7      2e-35  122.4   6.7    1.0  1  DER1      Der1-like family
    0.00097   19.2   4.9    0.00097   19.2   4.9    1.4  2  Rhomboid  Rhomboid family
     0.0099   15.4   1.9      0.015   14.8   1.9    1.3  1  NMT_C     Myristoyl-CoA:protein N-myristoyltransferase, C-ter
  ------ inclusion threshold ------
        0.3   10.9   3.5        1.9    8.3   0.1    3.0  3  UPF0640   Uncharacterised protein family UPF0640


Domain annotation for each model (and alignments):
>> DER1  Der1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.4   6.7   4.5e-39     2e-35       1     175 [.      16     192 ..      16     208 .. 0.94

  Alignments for each domain:
  == domain 1  score: 122.4 bits;  conditional E-value: 4.5e-39
        DER1   1 iPavTRllltatvvltllgrlelispaklvlsyelvvkkvQiwRlltsllyfsstgfsflinlyfiyqysskLEegsfrgrsadyvylllflavlitll 99 
                 iP+vTR+ l++   +t+l   +l sp+  +l+ + v+kk  ++Rl+t++++  +t ++f++n +++yq  s LE+++++ ++++y+y+ll++a++i+++
  EPX70495.1  16 IPPVTRYGLITMSTITALYLGQLFSPQNYLLDLDSVIKKRELFRLITNFFF-IGTKLEFIFNALSFYQNGSFLENHVYQANTKNYIYYLLKVALIIDVF 113
                 9***********************************************998.6789******************************************* PP

        DER1 100 glladl.vvLgqalilaivYvwskknkdvqvsFfgvlrvkakylPlvllafsfllge..svvvsligilvghiyyfled 175
                 +l + + ++L ++l  a++Y+ws  n++ +v+ f+v+++ +kylP+ ++++sfl+g+  s+++s++g++ g+++  le 
  EPX70495.1 114 SLVSGIgSALFSSLSCAMAYTWSLYNAHQKVRLFFVFELPGKYLPYSMIVMSFLMGGpySLIESIFGLIAGFLVSKLES 192
                 **665669************************************************998889***********998864 PP

>> Rhomboid  Rhomboid family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       2.5   1.1e+04      45      60 ..      21      36 ..      13      43 .. 0.55
   2 !   19.2   4.9   2.2e-07   0.00097       2     144 ..      52     190 ..      51     196 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 2.5
                HHHHHHHHHHHHHHHH CS
    Rhomboid 45 rflllyllsglagsll 60
                r++l+++++ +a  l+
  EPX70495.1 21 RYGLITMSTITALYLG 36
                5555555544444333 PP

  == domain 2  score: 19.2 bits;  conditional E-value: 2.2e-07
                 GGCC-TTHHHHGGG--SSHHHHHHHHHHHHHHHHHHHHHH..HHHHHHHHHHHHHHHHHHHHHHHH-S...-EESSHHHHHHHHHHHHHHHHCCCCGS- CS
    Rhomboid   2 lkrgelwrlltsmflHagwlHllfNmlallvfGsplerrl..GslrflllyllsglagsllsllfsaesesplvGaSGaifgllgallvlvprnrkllr 98 
                 +k++el+rl+t  f+ +  l ++fN+l+++  Gs le+ +    ++  ++yll + +   +++l+s  +   ++ +S   +++   +++   +++ +l+
  EPX70495.1  52 IKKRELFRLITNFFFIGTKLEFIFNALSFYQNGSFLENHVyqANTKNYIYYLLKVALIIDVFSLVSGIG---SALFSSLSCAMAYTWSLYNAHQKVRLF 147
                 6899**********************************9977556666777775555555555555554...334799999999999999999999999 PP

                 ---HC...CCCCCCCCCCHHHCTSSSTTTHHHHHHHHHHHHHHHHH CS
    Rhomboid  99 kliiallllllfillnlvlgllpraggvsnlAHlgGllaGlllgll 144
                 +++  +  +l++ ++ + + + +++   s +  ++Gl+aG+l++ l
  EPX70495.1 148 FVFELPGKYLPYSMIVMSFLMGGPY---SLIESIFGLIAGFLVSKL 190
                 9999999999999999999888887...*************98765 PP

>> NMT_C  Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   1.9   3.4e-06     0.015     130     182 ..      52     103 ..      24     110 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 3.4e-06
                 THHHHHHHHHHHHHHHHHHCTESEEEEESSTTGGGCTTTTT-EEEEEEEEEEE CS
       NMT_C 130 klkkrlkeLvkdalilakkakfDvfnaltlmdnklfleelkFgagdgkLnYYL 182
                  +k++l +L+++   +  k +f +fnal+  +n +fle+  ++a  ++  YYL
  EPX70495.1  52 IKKRELFRLITNFFFIGTKLEF-IFNALSFYQNGSFLENHVYQANTKNYIYYL 103
                 4567999*************99.9****************************9 PP

>> UPF0640  Uncharacterised protein family UPF0640
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.13   5.7e+02       4      21 ..       7      24 ..       4      27 .. 0.85
   2 ?    8.3   0.1   0.00043       1.9      21      39 ..      57      75 ..      45      99 .. 0.83
   3 ?    0.6   0.5      0.11   4.9e+02      11      33 ..     150     170 ..     140     180 .. 0.61

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.13
     UPF0640  4 klvkklldkvPGkrrlGv 21
                ++v++ll+++P   r+G+
  EPX70495.1  7 NQVQELLERIPPVTRYGL 24
                789********8888885 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00043
     UPF0640 21 vYrflPlFFvlGaalEfsm 39
                ++r++  FF +G+ lEf+ 
  EPX70495.1 57 LFRLITNFFFIGTKLEFIF 75
                6899999**********96 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.11
     UPF0640  11 dkvPGkrrlGvYrflPlFFvlGa 33 
                  ++PGk    +Y ++ + F++G+
  EPX70495.1 150 FELPGKY--LPYSMIVMSFLMGG 170
                 3455554..35666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       497  (0.0277205); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1646.15
//
Query:       EPX70496.1  [L=113]
Description: SUMO protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-23   82.8   0.2    1.5e-23   82.4   0.2    1.2  1  Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like
    5.8e-13   48.4   0.1    7.3e-13   48.1   0.1    1.1  1  ubiquitin  Ubiquitin family


Domain annotation for each model (and alignments):
>> Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.4   0.2   1.6e-27   1.5e-23       1      72 []      36     106 ..      36     106 .. 0.98

  Alignments for each domain:
  == domain 1  score: 82.4 bits;  conditional E-value: 1.6e-27
                 EEEEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEEETTEE--TTSBGGGSS--TTEEEEEEX CS
   Rad60-SLD   1 ikiilkgkdgkevkikVkptttvskLieayrkkkgipeeqkvrLiFDGeeLdpnstvedldiedgdtidvvi 72 
                 i+++++g+d++ev++k+k+tt +skL++ y+ ++g    ++ r++ DGe+++p++t+++ld+edgd+i++v+
  EPX70496.1  36 INLKVVGQDNNEVFFKIKKTTEFSKLMKIYCARQGKTM-NSLRFLVDGERIRPDQTPAELDMEDGDQIEAVL 106
                 89************************************.******************************996 PP

>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.1   0.1   8.1e-17   7.3e-13       1      71 [.      36     108 ..      36     109 .. 0.97

  Alignments for each domain:
  == domain 1  score: 48.1 bits;  conditional E-value: 8.1e-17
                 EEEEE..TTSEEEEEEEETTSBHHHHHHHHHHHHTSSGGGEEEEETTEEE-TTSBHGGHTTSTTEEEEEEESS CS
   ubiquitin   1 itvkt..ldgkkitleveesdtveelKekiaekegipaeqqrLiysGkvLedertleeygiqdgstlhlvlrl 71 
                 i++k+  +d++++ ++++++++ ++l++ +++++g  ++++r++ +G++++ ++t++e++++dg++++ vl++
  EPX70496.1  36 INLKVvgQDNNEVFFKIKKTTEFSKLMKIYCARQGKTMNSLRFLVDGERIRPDQTPAELDMEDGDQIEAVLEQ 108
                 7788888***************************************************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       500  (0.0278878); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 829.53
//
Query:       EPX70497.1  [L=547]
Description: TATA element modulatory factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.6e-26   91.0  49.6    5.6e-25   87.8  13.3    4.0  4  TMF_TATA_bd   TATA element modulatory factor 1 TATA binding
      3e-10   40.0   9.0      3e-10   40.0   9.0    6.1  6  TMF_DNA_bd    TATA element modulatory factor 1 DNA binding
      0.006   15.5  12.1      0.006   15.5  12.1    3.0  2  DUF812        Protein of unknown function (DUF812)
  ------ inclusion threshold ------
      0.011   15.9   7.0      0.011   15.9   7.0    4.0  2  UPF0242       Uncharacterised protein family (UPF0242) N-term
       0.04   14.0  54.4        1.6    8.8  17.2    5.4  4  TPR_MLP1_2    TPR/MLP1/MLP2-like protein
      0.049   13.0  30.9      0.052   12.9   4.4    3.3  3  DUF4407       Domain of unknown function (DUF4407)
       0.59    9.0  49.9       0.11   11.4   9.4    3.4  3  Spc7          Spc7 kinetochore protein
        4.3    7.5  46.1      0.075   13.3  14.3    3.7  3  ATG16         Autophagy protein 16 (ATG16)
        9.5    6.6  13.6          1    9.7   2.0    4.1  4  MADF_DNA_bdg  Alcohol dehydrogenase transcription factor Myb/
        9.8    4.2  48.2       0.89    7.6  11.5    2.1  2  HOOK          HOOK protein


Domain annotation for each model (and alignments):
>> TMF_TATA_bd  TATA element modulatory factor 1 TATA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   6.6       3.5   6.2e+03      42      77 ..      92     128 ..      41     137 .. 0.45
   2 ?    1.5   6.0      0.19   3.4e+02       9      65 ..      98     157 ..      90     167 .. 0.66
   3 !   16.6  10.7   3.8e-06    0.0069      13      92 ..     165     248 ..     153     251 .. 0.86
   4 !   87.8  13.3   3.1e-28   5.6e-25       6     114 ..     435     543 ..     430     544 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 3.5
  TMF_TATA_bd  42 rdeareeivklmkeneelke.lkkeleelekeleelq 77 
                   +++ e  v++ ++ +++++ ++++++ leke e l+
   EPX70497.1  92 PNTTDESKVDVQERLDSVRKdYENRIALLEKENELLK 128
                  3333333333333333322112233333333333333 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.19
  TMF_TATA_bd   9 psvqlverlsseirrlEgElaslkeelerleaerdear...eeivklmkeneelkelkke 65 
                  ++v + erl s  +  E+ +a l++e+e l+++ +e++    e+v+l++++e+l+++++ 
   EPX70497.1  98 SKVDVQERLDSVRKDYENRIALLEKENELLKRKVEEVTvdsMEVVRLTRQVETLSTQQSI 157
                  566666777777777777777777777777776666642225777888888777776654 PP

  == domain 3  score: 16.6 bits;  conditional E-value: 3.8e-06
  TMF_TATA_bd  13 lverlsseirrlEgElaslkeelerleaerdeareeivklmkene....elkelkkeleelekeleelqeryetlLellGeksE 92 
                    e+l++ei  l g++++l e+++  ++  ++++e +   m++ e    +l+++++e+e+l+k++++lq++y+t  ++l++  E
   EPX70497.1 165 SEEKLKAEIEYLSGQCHKLAENNQLAQKDSSAVNEKLFGFMQREEafkkQLESKNDEIEKLSKSFTDLQQEYQTKTQMLQQTIE 248
                  5599*************************************99983333466788999*********************99877 PP

  == domain 4  score: 87.8 bits;  conditional E-value: 3.1e-28
  TMF_TATA_bd   6 sagpsvqlverlsseirrlEgElaslkeelerleaerdeareeivklmkeneelkelkkeleelekeleelqeryetlLellGeksEeveELraDvaD 103
                  ++gp+++l+e+lss+irrlE+El+++k+++ +l ++rd+ar+eiv+ + e e+++++++el+el++++++l++++ ++  +l  ++++v EL+ D+++
   EPX70497.1 435 NTGPDMSLLEQLSSTIRRLEAELQTTKQQVVQLINQRDQARQEIVNSYVEKETKDTSERELTELREQYDSLRKELTEAQAILRRRTDRVYELELDIKE 532
                  7899********************************************************************************************** PP

  TMF_TATA_bd 104 lKemykeqveq 114
                  ++++y++q++ 
   EPX70497.1 533 MRQLYQSQIDL 543
                  *********96 PP

>> TMF_DNA_bd  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.0   9.0   1.7e-13     3e-10       8      53 ..      39      84 ..      34     107 .. 0.87
   2 ?    1.3   3.6       0.2   3.6e+02      40      71 ..     100     132 ..      87     135 .. 0.72
   3 ?   -2.0   1.4         2   3.7e+03      37      52 ..     168     183 ..     143     202 .. 0.54
   4 ?    4.0   3.5     0.028        50      45      72 ..     211     238 ..     205     246 .. 0.70
   5 ?    3.0   2.4     0.059   1.1e+02      30      66 ..     445     481 ..     442     489 .. 0.84
   6 !    5.4   3.6    0.0099        18      19      70 ..     485     537 ..     482     540 .. 0.84

  Alignments for each domain:
  == domain 1  score: 40.0 bits;  conditional E-value: 1.7e-13
  TMF_DNA_bd  8 keKDeqIaqLmeEGekLskkelklnntikkLrkknkelekeikelk 53
                k+KD+ I +L eEG++Lsk el+lnntik+Lrk + e+e+++k+++
  EPX70497.1 39 KSKDDVIRKLVEEGQALSKHELQLNNTIKNLRKNLIETESKLKRQE 84
                79*****************************************997 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.2
  TMF_DNA_bd  40 kknkele.keikelkkkleklekeleeleerlk 71 
                  +++e   +  k+++++++ leke e l+++ +
  EPX70497.1 100 VDVQERLdSVRKDYENRIALLEKENELLKRKVE 132
                 555555414456789************999876 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 2
  TMF_DNA_bd  37 kLrkknkelekeikel 52 
                 kL+++++ l  +  +l
  EPX70497.1 168 KLKAEIEYLSGQCHKL 183
                 2333333333222222 PP

  == domain 4  score: 4.0 bits;  conditional E-value: 0.028
  TMF_DNA_bd  45 lekeikelkkkleklekeleeleerlke 72 
                   k++++ ++++ekl+k+++ l++++++
  EPX70497.1 211 FKKQLESKNDEIEKLSKSFTDLQQEYQT 238
                 4567777777777777777777777665 PP

  == domain 5  score: 3.0 bits;  conditional E-value: 0.059
  TMF_DNA_bd  30 klnntikkLrkknkelekeikelkkkleklekeleel 66 
                 +l+ ti +L ++++ + +++ +l ++ ++  +e+ + 
  EPX70497.1 445 QLSSTIRRLEAELQTTKQQVVQLINQRDQARQEIVNS 481
                 6889999999999999999999999999999998875 PP

  == domain 6  score: 5.4 bits;  conditional E-value: 0.0099
  TMF_DNA_bd  19 eEGekLskkel.klnntikkLrkknkelekeikelkkkleklekeleeleerl 70 
                 +E ++ s  el +l+++ ++Lrk++ e+   +++ ++++ +le +++e+++++
  EPX70497.1 485 KETKDTSERELtELREQYDSLRKELTEAQAILRRRTDRVYELELDIKEMRQLY 537
                 566667777763579999******************************99987 PP

>> DUF812  Protein of unknown function (DUF812)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9  19.9      0.66   1.2e+03     319     468 ..      39     190 ..       9     207 .. 0.65
   2 !   15.5  12.1   3.3e-06     0.006     388     484 ..     440     535 ..     419     540 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.66
      DUF812 319 eteeelkkkreeeleelqeqieeleskieeleeeikklessikqveeeleeekeeneelekevklkkktlellpdaeeniekLqalveasaqrlvela. 416
                 ++++++  k  ee ++l+++  +l+++i++l++++ + es++k+ e   + e++ n++ e++v++++++ +  +d e+ i+ L+++ e  ++++ e+  
  EPX70497.1  39 KSKDDVIRKLVEEGQALSKHELQLNNTIKNLRKNLIETESKLKRQEV-GKSEDAPNTTDESKVDVQERLDSVRKDYENRIALLEKENELLKRKVEEVTv 136
                 55556666666666666666677777777777777777776666444.455667788888889999998888899999999999998888888888862 PP

      DUF812 417 kqWekhRvplieeyrelkesksekek...eaerkl.eeikklrekmkevaeelrqk 468
                 + +e  R  l+++ ++l++++s +++   ++e+kl +ei+ l  +++++ae+ +  
  EPX70497.1 137 DSMEVVR--LTRQVETLSTQQSIQKSqwlRSEEKLkAEIEYLSGQCHKLAENNQLA 190
                 5677766..55555566555555554222444443157777777777777655443 PP

  == domain 2  score: 15.5 bits;  conditional E-value: 3.3e-06
      DUF812 388 lellpdaeeniekLqalveasaqrlvelakqWekhRvplieeyrelkesksekekeaerkleeikklrekmkevaeelrqkeellkqLvaeleklpk 484
                 ++ll++  + i++L+a++++++q++v+l +q +++R+ +++ y e ke k++ e e  +  e+  +lr+++ e+++ lr+  + + +L+ +++++ +
  EPX70497.1 440 MSLLEQLSSTIRRLEAELQTTKQQVVQLINQRDQARQEIVNSYVE-KETKDTSERELTELREQYDSLRKELTEAQAILRRRTDRVYELELDIKEMRQ 535
                 67999999***********************************87.677788899999999***************************999999876 PP

>> UPF0242  Uncharacterised protein family (UPF0242) N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?  -10.7  33.0        10   1.8e+04      81     171 ..     138     242 ..      10     251 .. 0.78
   2 ?   15.9   7.0   6.1e-06     0.011      92     182 ..     444     533 ..     410     537 .. 0.77

  Alignments for each domain:
  == domain 1  score: -10.7 bits;  conditional E-value: 10
     UPF0242  81 d..........eglktkeealeelq..eeeeeLkeeldakeeelerlkeenqqLqekleaiae...dfeelkleleeqLaekqellqeyqetieeqrsv 164
                 +          e l+t +++++++q    ee+Lk e+++ + + ++l e+nq  q+  +a+ e    f +   + ++qL+ k+  ++++ +++++++++
  EPX70497.1 138 SmevvrltrqvETLST-QQSIQKSQwlRSEEKLKAEIEYLSGQCHKLAENNQLAQKDSSAVNEklfGFMQREEAFKKQLESKNDEIEKLSKSFTDLQQE 235
                 2333333333244443.4567776644567788888999999999998888877766666666777777778888888888888888888888888888 PP

     UPF0242 165 lekrqdq 171
                  + + + 
  EPX70497.1 236 YQTKTQM 242
                 8777665 PP

  == domain 2  score: 15.9 bits;  conditional E-value: 6.1e-06
     UPF0242  92 eelqeeeeeLkeeldakeeelerlkeenqqLqekleaiae......dfeelkleleeqLaekqellqeyqetieeqrsvlekrqdqieqLeskVrDl 182
                 e       +L   +   e el+  k++  qL  +  ++ +        +e k  +e +L e +e+ + ++++++e ++ l +r d++++Le  ++ +
  EPX70497.1 444 E-------QLSSTIRRLEAELQTTKQQVVQLINQRDQARQeivnsyVEKETKDTSERELTELREQYDSLRKELTEAQAILRRRTDRVYELELDIKEM 533
                 3.......4444455555666666666666666666666633333334788999*************************************988866 PP

>> TPR_MLP1_2  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   9.2      0.56     1e+03      59     128 ..      66     133 ..      45     134 .. 0.54
   2 ?    8.8  17.2   0.00087       1.6       6     121 ..      74     189 ..      70     192 .. 0.91
   3 ?    5.7   4.4     0.008        14       7      55 ..     198     246 ..     191     253 .. 0.60
   4 ?    8.7  13.7   0.00095       1.7      12     108 ..     445     544 ..     441     547 .] 0.64

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.56
  TPR_MLP1_2  59 lqalreelnelkaeiaelkaeaesakaeleeseesweeqkeelekelselekriedlneqNklLhdQlEs 128
                 +++lr+ l e++++++   +e+ + + + ++  es    +e+l++  ++ e+ri  l++ N+lL  + E+
  EPX70497.1  66 IKNLRKNLIETESKLKR--QEVGKSEDAPNTTDESKVDVQERLDSVRKDYENRIALLEKENELLKRKVEE 133
                 44455555444444432..222333333333333333444556666666777777777777777666665 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00087
  TPR_MLP1_2   6 leeeikslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeeleke 104
                  e+e k +++e  ++e++ ++  e     +e++    ++Ye+ + + +++ + l++  ee+     e+  l+ ++e+++++ + ++++w + +e+l+ e
  EPX70497.1  74 IETESKLKRQEVGKSEDAPNTTDESKVDVQERLDSVRKDYENRIALLEKENELLKRKVEEVTVDSMEVVRLTRQVETLSTQQSIQKSQWLRSEEKLKAE 172
                 5667777777777788888888888888999******************************************************************** PP

  TPR_MLP1_2 105 lselekriedlneqNkl 121
                 ++ l  ++  l e N+l
  EPX70497.1 173 IEYLSGQCHKLAENNQL 189
                 ***************97 PP

  == domain 3  score: 5.7 bits;  conditional E-value: 0.008
  TPR_MLP1_2   7 eeeikslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaed 55 
                 +e++    +++e+ +++l++  +++ek +++ ++ qq Y++  +   ++
  EPX70497.1 198 NEKLFGFMQREEAFKKQLESKNDEIEKLSKSFTDLQQEYQTKTQMLQQT 246
                 4455555666666677777777777777777777777776655544444 PP

  == domain 4  score: 8.7 bits;  conditional E-value: 0.00095
  TPR_MLP1_2  12 slkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkha...edvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeelekelse 107
                 +l++ + ++ea+lq+ ++++ +  ++  +a q   +  v+++   +  +el++lre++++l++e++e++a + + +  + e e  ++e ++ ++++++ 
  EPX70497.1 445 QLSSTIRRLEAELQTTKQQVVQLINQRDQARQEIVNSYVEKEtkdTSERELTELREQYDSLRKELTEAQAILRRRTDRVYELELDIKEMRQLYQSQIDL 543
                 444455555555555555555555554444444444444332100233689999999999999999999999999999999999999999999998876 PP

  TPR_MLP1_2 108 l 108
                 l
  EPX70497.1 544 L 544
                 5 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2  11.9   0.00078       1.4     131     254 ..      55     215 ..      18     220 .. 0.73
   2 ?    3.2   1.1     0.026        47     133     170 ..     213     250 ..     211     320 .. 0.71
   3 ?   12.9   4.4   2.9e-05     0.052     129     224 ..     444     535 ..     416     547 .] 0.76

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00078
     DUF4407 131 ltaelaeleaqiaalqaeidaaearldalraeaqkeldgtk....gtgttgvaGkgpaakekkaqldaaqaelaelkakld.................. 207
                 l++   +l++ i++l++++        +++ +++++  g++    +t+   ++ k ++ ++ ++  +++++++a l+++ +                  
  EPX70497.1  55 LSKHELQLNNTIKNLRKNL-------IETESKLKRQEVGKSedapNTT---DESKVDVQERLDSVRKDYENRIALLEKENEllkrkveevtvdsmevvr 143
                 3333334444444444444.......4444444444444443322222...344566666777777777777777777777888888888888888888 PP

     DUF4407 208 .........................atarlaalraelaeleaerakeraasqaaaaaddGllarlealdrlt 254
                                           +a+++ l  +  +l+++ + ++++s a +++  G+++r+ea+++  
  EPX70497.1 144 ltrqvetlstqqsiqksqwlrseekLKAEIEYLSGQCHKLAENNQLAQKDSSAVNEKLFGFMQREEAFKKQL 215
                 8888889999999********9999******************************************87654 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.026
     DUF4407 133 aelaeleaqiaalqaeidaaearldalraeaqkeldgt 170
                 ++l+  +++i++l++ ++ ++++++++++ +q+ ++  
  EPX70497.1 213 KQLESKNDEIEKLSKSFTDLQQEYQTKTQMLQQTIESS 250
                 56666677777777777777777777777777776654 PP

  == domain 3  score: 12.9 bits;  conditional E-value: 2.9e-05
     DUF4407 129 aaltaelaeleaqiaalqaeidaaearldalraeaqkeldgtkgtgttgvaGkgpaakekkaqldaaqaelaelkakld.atarlaalraelaelea 224
                 ++l++++++lea+++  ++++ ++ +++d++r+e  + +  + ++ t+     + + +e ++q+d +++el+e++a l+ +t+r+ +l+  ++e+++
  EPX70497.1 444 EQLSSTIRRLEAELQTTKQQVVQLINQRDQARQEIVNSYVEKETKDTS-----ERELTELREQYDSLRKELTEAQAILRrRTDRVYELELDIKEMRQ 535
                 4589999***************************99999986665544.....68888999999999999999998866644444444444444433 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8  17.8     0.025        45     146     261 ..      43     159 ..      39     179 .. 0.71
   2 ?    2.9  20.2     0.023        41     122     260 ..     105     246 ..     105     258 .. 0.73
   3 ?   11.4   9.4     6e-05      0.11     155     242 ..     440     536 ..     429     545 .. 0.52

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.025
        Spc7 146 enlegleedkelLekqeeeldellpeleeekaeleeeleklqe.aaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqk 243
                 + + +l e+ + L+k+e +l++  ++l+++  e e++l++++  ++e+  + + e+   ++e+l+++ +++e++ + l++ +e l+++ e+++  + + 
  EPX70497.1  43 DVIRKLVEEGQALSKHELQLNNTIKNLRKNLIETESKLKRQEVgKSEDAPNTTDESKVDVQERLDSVRKDYENRIALLEKENELLKRKVEEVTVDSMEV 141
                 6678999********************************9998655666666677777899***********666666666666666666655555555 PP

        Spc7 244 seleeeiaeaervleeck 261
                  +l  +++     +  +k
  EPX70497.1 142 VRLTRQVETLSTQQSIQK 159
                 555555554444443333 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.023
        Spc7 122 rlqakkdWYeWRmqllegLkegleenlegleedkelLekqeeeldellpeleeekaeleeeleklqeaaeeles.id..keeLeelreelaelkaeiee 217
                 rl + ++ Ye R+ lle+  e l++++e+++ d+ ++ +   ++++l  + + +k++  +  ekl+++ e l+  +    e+ + ++++ +++++++  
  EPX70497.1 105 RLDSVRKDYENRIALLEKENELLKRKVEEVTVDSMEVVRLTRQVETLSTQQSIQKSQWLRSEEKLKAEIEYLSGqCHklAENNQLAQKDSSAVNEKLFG 203
                 566667778888888888888888888888888888888888888888777777777666677777766655543443223334466777888888888 PP

        Spc7 218 kkkelaelqeqleeleekieelkeqkseleeeiaeaervleec 260
                 ++++ +  ++qle+++++ie+l+++ ++l++e + + ++l+++
  EPX70497.1 204 FMQREEAFKKQLESKNDEIEKLSKSFTDLQQEYQTKTQMLQQT 246
                 8888888888888888888888888888888888888877765 PP

  == domain 3  score: 11.4 bits;  conditional E-value: 6e-05
        Spc7 155 kelLekqeeeldellpeleeekaeleeeleklqe.........aaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeq 242
                  +lLe+  + + +l  el++ k+++ + +++  +          ++e ++  + eL elre+ ++l +e+ e ++ l ++++++ ele +i+e+++ 
  EPX70497.1 440 MSLLEQLSSTIRRLEAELQTTKQQVVQLINQRDQarqeivnsyVEKETKDTSERELTELREQYDSLRKELTEAQAILRRRTDRVYELELDIKEMRQL 536
                 4555555555555555555555555555555555222222222222233344555555555555555555555555555555555555555555443 PP

>> ATG16  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   3.0     0.049        87      72     122 ..      34      84 ..      11     114 .. 0.80
   2 ?   13.3  14.3   4.2e-05     0.075      29     147 ..     115     244 ..      96     248 .. 0.88
   3 ?    1.2  14.1      0.21   3.7e+02      68     140 ..     456     531 ..     417     545 .. 0.41

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.049
       ATG16  72 qsakiqsleqklaqlreelaelyksrgelaqrllelneelqkleeklkede 122
                 + +  +s ++ + +l ee ++l k   +l++ +++l + l + e+klk++e
  EPX70497.1  34 SPDAPKSKDDVIRKLVEEGQALSKHELQLNNTIKNLRKNLIETESKLKRQE 84 
                 456667889999999999999999999999999999999999999998875 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 4.2e-05
       ATG16  29 drtsaleaenaklekaaasaks........sksskksakekeasasq...snskqsakiqsleqklaqlreelaelyksrgelaqrllelneelqklee 116
                 +r+++le+en+ l+++ ++++         + + ++ +++++ ++sq   s++k +a+i+ l+ ++++l e  + ++k  +  +++l   ++  ++ ++
  EPX70497.1 115 NRIALLEKENELLKRKVEEVTVdsmevvrlTRQVETLSTQQSIQKSQwlrSEEKLKAEIEYLSGQCHKLAENNQLAQKDSSAVNEKLFGFMQREEAFKK 213
                 799***************999999888766444445555555555559999999********************************************* PP

       ATG16 117 klkedeerlaeleaeraaletklkdreeelr 147
                 +l++++ ++++l+++ ++l+++++ +++ l+
  EPX70497.1 214 QLESKNDEIEKLSKSFTDLQQEYQTKTQMLQ 244
                 **********************999888765 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.21
       ATG16  68 snskqsakiqsleqklaqlreelaely...ksrgelaqrllelneelqkleeklkedeerlaeleaeraaletklk 140
                 + +++++++ +l +++ q r+e  ++y    ++ +++  l+el e+ + l+++l+e ++ l++ ++++ +le  +k
  EPX70497.1 456 ELQTTKQQVVQLINQRDQARQEIVNSYvekETKDTSERELTELREQYDSLRKELTEAQAILRRRTDRVYELELDIK 531
                 1112233333333333333333333331111222223333333333333333333333333333333333333333 PP

>> MADF_DNA_bdg  Alcohol dehydrogenase transcription factor Myb/SANT-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.2      0.41   7.4e+02      25      64 ..      41      81 ..      36      99 .. 0.61
   2 ?   -0.4   0.1       0.8   1.4e+03      42      64 ..      99     121 ..      83     139 .. 0.73
   3 ?    0.9   0.1      0.32   5.8e+02      31      65 ..     213     245 ..     197     259 .. 0.69
   4 ?    9.7   2.0   0.00057         1      23      64 ..     469     510 ..     459     541 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.41
  MADF_DNA_bdg 25 rekaweeiaeelnekvdvee..ckkkwknLRdryrrelrkkk 64
                  ++++ ++++ee +  ++++e  + +++knLR++      k k
    EPX70497.1 41 KDDVIRKLVEEGQ-ALSKHElqLNNTIKNLRKNLIETESKLK 81
                  5555666666654.444444448899*****88755444444 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.8
  MADF_DNA_bdg  42 veeckkkwknLRdryrrelrkkk 64 
                   + ++++++ + R+ y++ +   +
    EPX70497.1  99 KVDVQERLDSVRKDYENRIALLE 121
                   34589999999999999987777 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.32
  MADF_DNA_bdg  31 eiaeelnekvdveeckkkwknLRdryrrelrkkks 65 
                   +  e+ n   + e++ k ++ L ++y+ + ++ ++
    EPX70497.1 213 KQLESKN--DEIEKLSKSFTDLQQEYQTKTQMLQQ 245
                   4333444..34666999999999999999988882 PP

  == domain 4  score: 9.7 bits;  conditional E-value: 0.00057
  MADF_DNA_bdg  23 ekrekaweeiaeelnekvdveeckkkwknLRdryrrelrkkk 64 
                    +r++a +ei++++ ek ++++ ++ +++LR++y + +++  
    EPX70497.1 469 NQRDQARQEIVNSYVEKETKDTSERELTELREQYDSLRKELT 510
                   579***********999*****************88777666 PP

>> HOOK  HOOK protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3  28.6      0.02        36     392     580 ..      50     246 ..      36     252 .. 0.60
   2 ?    7.6  11.5   0.00049      0.89     295     394 ..     441     537 ..     438     542 .. 0.78

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.02
        HOOK 392 eklealqkekerllae....rdaLketneELkcaqlqqkelsqadalaskssssgenl.aaellpaevreklirLqhENKmLklkqegseeeklt..el 483
                 e  +al k   +l +     r +L et   Lk +++ ++e    da +++ +s++++    + + +++ +++  L++EN  Lk k+e+ + + ++  +l
  EPX70497.1  50 EEGQALSKHELQLNNTiknlRKNLIETESKLKRQEVGKSE----DAPNTTDESKVDVQeRLDSVRKDYENRIALLEKENELLKRKVEEVTVDSMEvvRL 144
                 4444444444444433000044444555555555544444....3333333333443303468999******************999876554331133 PP

        HOOK 484 qelle.....danrrkneLetenrlanqrileLeaqveelqkalqeqgskaedssllkkkleehleklkevqeelqkkkeqleelepklssnk....qk 573
                  ++ e     ++ ++ + L++e++l+   i+ L+ q   l+++ q     ++dss++++kl   +++ +  +++l++k+  +e+l+++++  +    +k
  EPX70497.1 145 TRQVEtlstqQSIQKSQWLRSEEKLKA-EIEYLSGQCHKLAENNQ---LAQKDSSAVNEKLFGFMQREEAFKKQLESKNDEIEKLSKSFTDLQqeyqTK 239
                 333331111134456666888887765.58888888766655544...456678999999999999999999999999999999988755433001355 PP

        HOOK 574 ieeleea 580
                 ++ l+++
  EPX70497.1 240 TQMLQQT 246
                 5555554 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.00049
        HOOK 295 DvLresadkvkkleatvetykkkledlndLrrqvklleernaeYlqktveleeelkkanalrsqlelykkqvqelhkklseeskkadklefelkkleek 393
                   L + +  + +lea+++t k+++ +l + r q +  +e    Y++k+++   e +  ++lr q ++++k+++e+++ l   + +   le ++k++++ 
  EPX70497.1 441 SLLEQLSSTIRRLEAELQTTKQQVVQLINQRDQAR--QEIVNSYVEKETKDTSE-RELTELREQYDSLRKELTEAQAILRRRTDRVYELELDIKEMRQL 536
                 56777788888999999999999999999888885..45555688877765554.77888999999999999999999999999999999999988765 PP

        HOOK 394 l 394
                 +
  EPX70497.1 537 Y 537
                 5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (547 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2487  (0.138714); expected 358.6 (0.02)
Passed bias filter:                      493  (0.0274974); expected 358.6 (0.02)
Passed Vit filter:                        99  (0.00552178); expected 17.9 (0.001)
Passed Fwd filter:                        61  (0.00340231); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 1.30u 0.37s 00:00:01.67 Elapsed: 00:00:00.58
# Mc/sec: 2830.60
//
Query:       EPX70498.1  [L=392]
Description: splicing factor Slu7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-42  146.1  16.2      4e-41  141.6  16.2    2.3  1  Slu7      Pre-mRNA splicing Prp18-interacting factor
  ------ inclusion threshold ------
       0.24   11.5   1.3       0.43   10.8   1.3    1.4  1  zf-CCHC   Zinc knuckle


Domain annotation for each model (and alignments):
>> Slu7  Pre-mRNA splicing Prp18-interacting factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.6  16.2   4.4e-45     4e-41       2     262 ..     154     384 ..     153     389 .. 0.80

  Alignments for each domain:
  == domain 1  score: 141.6 bits;  conditional E-value: 4.4e-45
        Slu7   2 dydakRDrwngYdpeeykkvveeyekieeerkklkeeelkkkaaeekekakkkeeeaedsdsdedeeedkddededky.aeeadmagekldeksritvr 99 
                 ++dakRDrwng+d+++ykkv+e+yeki++++kk  ++e++ +             +   sd+ +      ++   +++ +e ++       ++s++++ 
  EPX70498.1 154 SWDAKRDRWNGFDSSDYKKVIERYEKIDALQKKHADTENQTE-------------D--VSDTGK------NT--PSSTkEEGFNG-----GSNSSVSTP 224
                 8********************************999998811.............1..111111......11..11110223333.....3689***** PP

        Slu7 100 nLRiReDtAkYLlnldlnsakYDPKtRsmrdnplketskkekklfagdnfvras.geakefaklqlfAweaeekGedvhlqAnPtkaellakefkekke 197
                 +LR+ReD+  YL+  d    +Y+PK+Rsmrd   ++  +++    ++  fv+as g+  +f+klq+fAweae+ G+++h+ AnPt++e+ +++ ++ k+
  EPX70498.1 225 SLRMREDVVGYLRT-DNKGLQYEPKSRSMRDTTGSHLLSDS---TNESGFVKASgGDKDDFEKLQTFAWEAEKFGNRMHVVANPTAGEMEYRKNRQSKA 319
                 ************98.9999*************777666555...57999**77626899**************************************** PP

        Slu7 198 klkeekkksilekYggeehlkakpkelllaqteayveysesgrvikgkekakakSkYeeDvlinn 262
                 + +++ ++silekYg+ +  +++p    + +  +    s+++   k+++    +Sk e  +  +n
  EPX70498.1 320 ASQKQIEQSILEKYGDGTAKRKRPAGPSFPSDRSLDSASNHQAASKEEDASQSESKREKSISAEN 384
                 ****************9988777776677777777777777777777766666776665555554 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   1.3   4.8e-05      0.43       2      17 ..     112     127 ..     111     128 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 4.8e-05
                 CTSSSSSSSSTTTTST CS
     zf-CCHC   2 kCynCGepGHiardCp 17 
                 +C nCG + H  +dC 
  EPX70498.1 112 ACENCGAMSHKLKDCM 127
                 7**************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (392 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1206  (0.0672653); expected 358.6 (0.02)
Passed bias filter:                      511  (0.0285013); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.45
# Mc/sec: 2613.78
//
Query:       EPX70499.1  [L=239]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.9e-14   50.9   0.0    2.3e-13   49.8   0.0    1.7  1  RRM_1       RNA recognition motif. (a.k.a. RRM, RBD, or RNP d


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.8   0.0   1.3e-17   2.3e-13       1      69 [.     100     170 ..     100     171 .. 0.94

  Alignments for each domain:
  == domain 1  score: 49.8 bits;  conditional E-value: 1.3e-17
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSH..HHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFesk..edAekAlealngkklggrel 69 
                 lfVgnLp+d + e+L e+F+  G++ +++++++  tg+ +g+afVe+ ++  e A kAl+ ++++++++r++
  EPX70499.1 100 LFVGNLPKDSDVETLQEHFKRAGQMPRVRIPTEkGTGRQRGYAFVEYINPhyEVASKALK-FHHTMYKNRKI 170
                 8**********************************************8753388******.*********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2745  (0.153104); expected 358.6 (0.02)
Passed bias filter:                      673  (0.037537); expected 358.6 (0.02)
Passed Vit filter:                       131  (0.0073066); expected 17.9 (0.001)
Passed Fwd filter:                        43  (0.00239835); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.86u 0.33s 00:00:01.19 Elapsed: 00:00:00.54
# Mc/sec: 1341.27
//
Query:       EPX70500.1  [L=160]
Description: 60S ribosomal protein L21 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.4e-47  158.4   5.6    5.3e-47  157.8   5.6    1.3  1  Ribosomal_L21e  Ribosomal protein L21e


Domain annotation for each model (and alignments):
>> Ribosomal_L21e  Ribosomal protein L21e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.8   5.6     3e-51   5.3e-47       1     101 []       1     101 [.       1     101 [. 0.99

  Alignments for each domain:
  == domain 1  score: 157.8 bits;  conditional E-value: 3e-51
                     X--S-STTTT-TTTTS--GGG-SS--SHHHH----TT-EEEE---TT--SS---GGGTT-EEEE..EEEETTEEEEEEEETTE..EEEEEE-GGG CS
  Ribosomal_L21e   1 mknskglrrgtrklfskkfrkkgvpplstylreykkGdkVdikidpsvqkgmphkryhGktgrvynvtkravgvivnkkvggkileKriivrieh 95 
                     m++s glr++tr++f++ fr++g ++lstyl++yk+Gd+Vdik++++vqkgmphk+yhGktg vynvt+++vgv+++k vg++++eKr++vrieh
      EPX70500.1   1 MPHSFGLRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGKTGIVYNVTQSSVGVLIYKIVGNRYMEKRVNVRIEH 95 
                     89********************************************************************************************* PP

                     EEE--. CS
  Ribosomal_L21e  96 lkksks 101
                     +k+sk+
      EPX70500.1  96 VKHSKC 101
                     ****98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       951  (0.0530426); expected 358.6 (0.02)
Passed bias filter:                      576  (0.0321267); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.28s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 1128.69
//
Query:       EPX70501.1  [L=376]
Description: protoheme I Xfarnesyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.7e-54  182.8  17.2    9.2e-54  182.4  17.2    1.1  1  UbiA      UbiA prenyltransferase family


Domain annotation for each model (and alignments):
>> UbiA  UbiA prenyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  182.4  17.2   5.1e-58   9.2e-54       2     250 ..      94     341 ..      93     344 .. 0.84

  Alignments for each domain:
  == domain 1  score: 182.4 bits;  conditional E-value: 5.1e-58
        UbiA   2 lipalvglalaaggspdlllllllllgtllaaaaanalNdyfDreiDadmertpnRPlvsGrispkealifaivllilgllllalllnpltallgllal 100
                 +++++ ++ala ++ +++ +l++l++gt+l++++ana+N+  +   D +m+rt+ RP+++G++ p+ +++fa  ++ilg +++ +l+np++ +lgl+++
  EPX70501.1  94 VLTTMSSYALAPYPGLSFGTLVWLTMGTALCSVSANAFNQCMEPTLDCQMARTRGRPIPRGAVRPEYGWLFASTTGILGTSMS-FLVNPTVGWLGLANI 191
                 78999******************************************************************************.*************** PP

        UbiA 101 lly.vvYtglrlKrrtllgtvvggiafglppllgwaa.vtgsl.....sllalllalavflltwaialandlrdregD.rkagiktlpvvlGrkaaril 191
                 +ly  vYt  +lKr+++l+t+vg+++++lppl+gwaa  +g+l      ++a++l++++f+++ a+ ++     + +D ++ g+++ + +  + +ar+ 
  EPX70501.1 192 VLYmGVYT--PLKRISILNTWVGSVVGALPPLMGWAAcSGGDLshagaFFTAAILFAWQFPHFNAFSTM-----VADDyKRCGYQMASWKRPALNARVA 283
                 ********..***************************88888874444444444444444444444444.....55557*******7777744444444 PP

        UbiA 192 .lalllavlllallllllalllllylllalllaalallraarlvrrrdakkaakfflfls 250
                   ++ll+++l + ++++ + +++ y++ a+++ +++++++++++r+ ++  a+++f f s
  EPX70501.1 284 lRYSLLFLPLSY-GFVWSGIVNPSYMVGASAANLYLIAKSWQFYRNPHKTNARSLF-FAS 341
                 337788888776.8899999999999999999999999988888887777776666.655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (376 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       390  (0.0217525); expected 358.6 (0.02)
Passed bias filter:                      270  (0.0150594); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.45
# Mc/sec: 2503.32
//
Query:       EPX70502.1  [L=355]
Description: sec14 cytosolic factor family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      4e-23   81.9   0.0    5.7e-23   81.4   0.0    1.2  1  CRAL_TRIO    CRAL/TRIO domain
    5.7e-06   26.4   0.1    1.6e-05   25.0   0.1    1.8  1  CRAL_TRIO_N  CRAL/TRIO, N-terminal domain
     0.0018   18.4   0.0     0.0033   17.6   0.0    1.4  1  CRAL_TRIO_2  Divergent CRAL/TRIO domain
  ------ inclusion threshold ------
       0.13   12.7   0.4       0.24   11.8   0.4    1.4  1  DUF4208      Domain of unknown function (DUF4208)


Domain annotation for each model (and alignments):
>> CRAL_TRIO  CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.4   0.0   1.3e-26   5.7e-23       7     158 ..     104     254 ..      98     255 .. 0.91

  Alignments for each domain:
  == domain 1  score: 81.4 bits;  conditional E-value: 1.3e-26
   CRAL_TRIO   7 gkvgihgrDkegrpvlylrlgrfdpk.kls.leelvralvlvlerllkelee.dgqvegvtvviDlkglslskmlwkpisllkkilkilqdnyperlgk 102
                  +++i g+Dk grp+++l+l++f p  + + ++el  ++++ +e + + l+  +++  gv  ++Dl+ +s ++++   ++++k +++++q++ype+lg+
  EPX70502.1 104 SMYFIWGQDKTGRPIVFLNLHNFIPPkDAKnMDELKALILYAMENARLFLDSeQNPSKGVLGLVDLTYFSRKNID---LEFAKVFAETFQNYYPEILGQ 199
                 578999***************88777677779***************9888888999******************...********************* PP

   CRAL_TRIO 103 ilivnaPk...lfkfafklvkpfldektreKikfvspsnteatlekyidpeqlpkelGG 158
                 +l+v + +   lf  ++++ k fld+++r+Ki+f++p +    +++y d +++p ++ G
  EPX70502.1 200 ALVVGSGFrmaLFEGVWSIGKYFLDPEVRKKIVFCKPYQ----VKDYLDNKYIPLSMQG 254
                 ******964448999********************9955....7999999999977766 PP

>> CRAL_TRIO_N  CRAL/TRIO, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.1   3.6e-09   1.6e-05       4      54 .]      27      75 ..      16      75 .. 0.64

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 3.6e-09
  CRAL_TRIO_N  4 ellahlqeseyklteeekfWltre.......dhddaclLRfLRArkwdvekAikrLed 54
                 e++++++++++    +       +       d  d +lLRfL+Ark++v++   +L++
   EPX70502.1 27 EFKSAFESEDQV---YT------SffeqcafDDFDLTLLRFLKARKYNVNDGASMLTN 75
                 444445444444...11......1222233344455****************999986 PP

>> CRAL_TRIO_2  Divergent CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   7.4e-07    0.0033       1     110 [.     115     235 ..     115     253 .. 0.76

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 7.4e-07
  CRAL_TRIO_2   1 grpVfvfi.aafl.lsskadldkllryvlhtladk....ivgke.....yvlVyfhtglssenkpslswlkkvystlprrykknlkklyivhps...t 84 
                  grp+++++  +f+ +++++++d+l   +l  + ++    + +++        +++ t +s+ ++++l ++k + +t+++ y++ l    +v ++   +
   EPX70502.1 115 GRPIVFLNlHNFIpPKDAKNMDELKALILYAM-ENarlfLDSEQnpskgVLGLVDLTYFSR-KNIDLEFAKVFAETFQNYYPEILGQALVVGSGfrmA 210
                  89******777777444455555555555555.3335553333356788888999999997.99******************************5533 PP

  CRAL_TRIO_2  85 fvktllktvlsafvsskfrkkveyvs 110
                   ++  +++++++f+ +++rkk++++ 
   EPX70502.1 211 LFEG-VWSIGKYFLDPEVRKKIVFCK 235
                  3333.55****************996 PP

>> DUF4208  Domain of unknown function (DUF4208)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.4   5.5e-05      0.24      20      75 ..     276     327 ..     272     328 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 5.5e-05
     DUF4208  20 ksLkrLkkltkekllskkerakilkkeLlkiGdfIdellkekkeekkeklkkhlWe 75 
                 ++L  L+      +  +ke ++i+++ L++ G+ I++ l+ek+ +++++  k++W+
  EPX70502.1 276 EQLAALDAK---YVEASKEFINITREWLYSAGKPIEKDLEEKR-AQIKSKCKQFWR 327
                 555566544...44799***********************975.777788888885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (355 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       451  (0.0251548); expected 358.6 (0.02)
Passed bias filter:                      369  (0.0205812); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2579.06
//
Query:       EPX70503.1  [L=222]
Description: nicotinamidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.4e-23   83.2   0.0    3.1e-23   82.8   0.0    1.2  1  Isochorismatase  Isochorismatase family
  ------ inclusion threshold ------
       0.12   12.4   0.0       0.25   11.4   0.0    1.5  1  CbiG_N           Cobalamin synthesis G N-terminal


Domain annotation for each model (and alignments):
>> Isochorismatase  Isochorismatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.8   0.0   3.5e-27   3.1e-23       2     174 ..       6     210 ..       5     211 .. 0.95

  Alignments for each domain:
  == domain 1  score: 82.8 bits;  conditional E-value: 3.5e-27
  Isochorismatase   2 alvviDmqndfv.eegvkeseeisavveninkllkaarkagipviftrdvhe......................leevkgdlderkaaphfkpg 72 
                      al+v+D+qndfv ++++ +++++++v++ in+ll +  k ++ +++t+d h+                      ++  ++ ++++ ++ h+++g
       EPX70503.1   6 ALIVVDVQNDFVtPGFAGHIPGATKVIPFINQLLGEDYKWDY-IVATKDLHPadhvsfrashgpkgmpkgtvldINAYGKTYKQQLWSTHCVEG 98 
                      9*********************************98776776.*******************************9******************* PP

  Isochorismatase  73 ttgaelvpelaplegdvvvdKt......rfsaf.....agtdldeiLkelgiktivlaGiatdvCVeatardaldlGyevvvvsDAvaalspel 155
                      t gae++pel+ ++ d+++ K        +s+f      +++l++iL+ ++i+++ ++G+a d+CV+ ta++a +  y+++vv D++  +++e+
       EPX70503.1  99 TVGAEFHPELKMDKVDYILPKGmdtlveSYSGFydavgRDNGLKKILDDRNITHVFVVGVAGDMCVRDTALHAKEY-YDTYVVNDGIYMSTEEA 191
                      **********************999999999999999999*********************************876.**************999 PP

  Isochorismatase 156 hdaalkrlkqafatvitte 174
                       +  l+ + +a   vit +
       EPX70503.1 192 GQLTLRDFDDAKISVITIN 210
                      9999999988888888765 PP

>> CbiG_N  Cobalamin synthesis G N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   2.8e-05      0.25      37      71 ..       5      39 ..       2      43 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 2.8e-05
                -EEEEE-TT--EEEEEE-TT.TTHHHHHHHHHHHT CS
      CbiG_N 37 paVvvvdeagrfvisllsGhlggAnelAeeiaall 71
                pa +vvd +  fv +  +Gh+ gA ++   i +ll
  EPX70503.1  5 PALIVVDVQNDFVTPGFAGHIPGATKVIPFINQLL 39
                9***********************98876666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       287  (0.0160076); expected 358.6 (0.02)
Passed bias filter:                      264  (0.0147247); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 1680.66
//
Query:       EPX70504.1  [L=433]
Description: arrestin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-05   25.4   0.1    0.00014   22.3   0.1    2.2  2  Arrestin_C  Arrestin (or S-antigen), C-terminal domain


Domain annotation for each model (and alignments):
>> Arrestin_C  Arrestin (or S-antigen), C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0     0.044   7.9e+02      96     112 ..     128     173 ..      16     190 .. 0.69
   2 !   22.3   0.1   7.9e-09   0.00014       7     129 ..     228     373 ..     223     376 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.044
                 -.............................S---EEEEEEEEEEEE CS
  Arrestin_C  96 a.............................rnvelikvsYklkvkl 112
                 +                             ++++++kv+Y++  ++
  EPX70504.1 128 SdysiaiqhtqgipvafemdlygqgggpgrQSTSQYKVNYYIYANA 173
                 1344445555555555555556666666667888889999886655 PP

  == domain 2  score: 22.3 bits;  conditional E-value: 7.9e-09
                 EEEEES-SEEETT--EEEEEEEEE-SSSEEEEEEEEEEEEEEEESS...................SEEEEEEEEEEEEE---...........B-TTEE CS
  Arrestin_C   7 leaslpkkgyvpGetipvtvkidndskkkvkkikvslvqhvdvcafnr.................snkkeknvvaksdsvkv...........tsaakd 77 
                 l+++lp++ +  Ge+i+v++k++n    +++++ + l ++++ +                      +k++++ v+k++ ++            +  +++
  EPX70504.1 228 LSVKLPRSEWLGGESISVNIKVENYGYCEINQLIMLLFKRITLFNGPLgkkyqldassrakkhnsIRKDFWKCVQKEEICEKrkneyckwqgvSTLETH 326
                 899**************************************998875589999***9888888876677777777755555535555555533333333 PP

                 .EEEEEEE.----B-----S---EEEEEEEEEEEEEEES.SEEEEEEEEEEEE CS
  Arrestin_C  78 kletevelqiPeeltpssarnvelikvsYklkvkltlsg.sggelslelPivl 129
                   +++++++iP e   s +  ++  +v+Y l++ + ++  +    ++++P ++
  EPX70504.1 327 --TMDCHIRIP-EKEVSIN-VGSDFQVEYVLQILVGTKWrT--LNCIKMPLQI 373
                 ..333666999.6666776.99**************99645..4455666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (433 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       418  (0.0233142); expected 358.6 (0.02)
Passed bias filter:                      311  (0.0173462); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.44
# Mc/sec: 2973.74
//
Query:       EPX70505.1  [L=830]
Description: NAK protein kinase Ppk29 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.8e-36  125.9   0.0      3e-36  125.1   0.0    1.3  1  Pkinase      Protein kinase domain
    5.6e-28   97.9   0.0      8e-28   97.4   0.0    1.2  1  Pkinase_Tyr  Protein tyrosine kinase
      0.008   15.5   0.0      0.013   14.9   0.0    1.3  1  Kinase-like  Kinase-like
  ------ inclusion threshold ------
      0.031   13.6   0.0      0.054   12.8   0.0    1.3  1  Kdo          Lipopolysaccharide kinase (Kdo/WaaP) family
      0.046   13.6   0.0        3.6    7.4   0.0    2.2  2  APH          Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.1   0.0   8.4e-40     3e-36       4     259 ..      29     297 ..      26     300 .. 0.83

  Alignments for each domain:
  == domain 1  score: 125.1 bits;  conditional E-value: 8.4e-40
                 EEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH..HHHHHHHHHHHHHS.CTTB--EEEEEEE.......SSEEEEEEE--TTEBHHHHHH.. CS
     Pkinase   4 leklGeGsfGkVykaveketgkivAvKkikkekakkkke..kkvlrEikilkklk.hpnivrlyevfee.......kdelylvleyveggeladlle.. 90 
                 ++ l eG+f+ Vy +  +++ +   +  + k+    +++  k++  Ei  +k lk +pniv++y++          + e++l++ey++gg l d+++  
  EPX70505.1  29 EKYLSEGGFSHVYAVQTSSKTDGSPLPAVLKRMYAADEHalKSIKLEIDTMKLLKsSPNIVTYYDCSFIplneekkDYEVLLLMEYCSGGGLIDFMNqr 127
                 667889******9998887777655555555554444444567**********************8644466777677899***************954 PP

                 HHSS--HHHHHHHHHHHHHHHHHHHHTT..EE-SS-SGGGEEEE.TTTEEEE-SGTTSEESSSSCS..........BCTTTSCGGGS-HHHH...TTSC CS
     Pkinase  91 rkgslseeeakkiakqilegleylHskg..iiHrDlKpeNiLid.ekgelKitDFGlakelesssk..........ltsfvgtseYlAPEvl...kene 173
                  ++ lse e+ ki++ + +g++ +H+ +  ++HrDlK eNiL+  +   +K++DFG ++e  +  +                t +Y+APE++    +  
  EPX70505.1 128 LQTRLSEVEVLKIISDVTQGVAAMHRLRppLVHRDLKVENILLTsSFSSFKLCDFGSVTEPIHAAEnsteihllekNLATFTTYQYRAPEMInlyAGLA 226
                 34559********************88888**************55566********9987666666889***98766677899********9888899 PP

                 BSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHH CS
     Pkinase 174 yskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeell 259
                 +++k+D+W+lGv+ly+l +  +pf+ +  +     +l+            + ++p   + s+++k+++  ll+ +p  R+ + +l+
  EPX70505.1 227 IDEKSDMWALGVLLYKLCYYITPFETQGPNA----ILNS-----------TYAFPPFPQYSHSLKNIIIALLQPNPCLRPNVFQLM 297
                 9************************333332....4444...........7899**************************988876 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.4   0.0   2.2e-31     8e-28       2     256 ..      27     297 ..      26     300 .. 0.84

  Alignments for each domain:
  == domain 1  score: 97.4 bits;  conditional E-value: 2.2e-31
                  EEEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS.-BTTB--EEEEEE.....SSSS....EEEEEE--TTEBHH CS
  Pkinase_Tyr   2 elgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkkl.khpnivkllgvct.....keep....llivteyvkgGdLl 89 
                  +++k l eG f++V+  + +++++ + +  ++K +   a+e+  +++  e+++mk l + pniv ++ +       +  +    +l+++ey++gG L 
   EPX70505.1  27 TVEKYLSEGGFSHVYAVQTSSKTDGSPLPAVLKRM-YAADEHALKSIKLEIDTMKLLkSSPNIVTYYDCSFiplneE--KkdyeVLLLMEYCSGGGLI 121
                  67899***************99999*********9.5566777999***********99*********998888641..235669************* PP

                  HHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT..EEEST-SGGGEEEEETT.EEEE-STTTHEE.TTTSSEE......EETTSSTSGGGGS-HHHH CS
  Pkinase_Tyr  90 kfLrkkekekltlkdllsfalqvAkGmeyLeskk..lvHrdlaarNvLlsenk.vvkisDfGLard.iekddey......vkkeeaklpvkWmapEsl 177
                  +f++++ +++l+  ++l+++ +v +G++ +++ +  lvHrdl   N+Ll+++    k++DfG   + i+  ++       +k+  + + +++ apE++
   EPX70505.1 122 DFMNQRLQTRLSEVEVLKIISDVTQGVAAMHRLRppLVHRDLKVENILLTSSFsSFKLCDFGSVTEpIHAAENSteihllEKNLATFTTYQYRAPEMI 219
                  *******************************87666*************986549*******6654144444333456656677788999******** PP

                  HHSE...EEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHH CS
  Pkinase_Tyr 178 kekk...ftsksDvWsfGvllwEiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfselv 256
                  +      + +ksD+W+ Gvll+ ++ +  +p+++  ++ +   l++ +  +   + +++l++++   ++ +p  Rp+  +l+
   EPX70505.1 220 NLYAglaIDEKSDMWALGVLLYKLCYY-ITPFETQGPNAI---LNSTYAFPPFPQYSHSLKNIIIALLQPNPCLRPNVFQLM 297
                  9988888*****************995.578887777665...466777777778889999999999999999999987775 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   3.5e-06     0.013     129     284 ..     122     286 ..      63     290 .. 0.72

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 3.5e-06
  Kinase-like 129 kvlqkrsethkkletiarlllTlqlirlaanLqak..glvhgkftvdnllldekg.glmlggftaLvragtkvvlseve.............kgfaPp 210
                  + +++r +t+ +++++ + +   ++ + +a ++ +   lvh +++v+n+ll   +  ++l +f++     + +  +++e               +  p
   EPX70505.1 122 DFMNQRLQTRLSEVEVLKIIS--DVTQGVAAMHRLrpPLVHRDLKVENILLTSSFsSFKLCDFGSVTEPIHAAE-NSTEihlleknlatfttYQYRAP 216
                  445555555555555544443..3344444455441259**************994599****99988777777.66665677777744433333445 PP

  Kinase-like 211 EllgsrggytrknktkmthkldaWqlGlviyriwclklPltlateea..keewkfklckkipekvkaLlkkfLqls 284
                  E+++        + + +  k d W+lG+  y +     P++ + ++a  ++ + f +  + +  +k +++ +Lq++
   EPX70505.1 217 EMINL------YAGLAIDEKSDMWALGVLLYKLCYYITPFETQGPNAilNSTYAFPPFPQYSHSLKNIIIALLQPN 286
                  55544......3458899999************9999***999888622678999999***************987 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   1.5e-05     0.054      88     166 ..     104     182 ..      58     212 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.5e-05
         Kdo  88 leyrAlllterlegaqdLedllakwae.laeelkrallkavgrliaklhrag..vnHadlyaknillqqeeeeeaeiwliDl 166
                   y  lll+e   g   ++ + ++ ++ l+e    +++ +v + +a +hr+   + H+dl + nill         + l D+
  EPX70505.1 104 KDYEVLLLMEYCSGGGLIDFMNQRLQTrLSEVEVLKIISDVTQGVAAMHRLRppLVHRDLKVENILLTSSF---SSFKLCDF 182
                 4477888888888877777777777777888888899************9975589***********9998...66666676 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0    0.0023       8.2       7     110 ..      35     156 ..      30     159 .. 0.80
   2 ?    7.4   0.0     0.001       3.6     152     181 ..     144     171 ..     119     176 .. 0.62

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0023
                 -.SSCEEEEEEETT.-.....-EEEEEE-TT..S-HHHHHHHHHHHHHHHHTT-B--B-CTTBS-EEETTE........EEEEEE----EE-SS..... CS
         APH   7 ggasnrtylvttpa.g.....ryvlrrnppa..raaeeirrevallrlLakagvpvPevlagdtddeeigl........lfalieyvpgrsllr..... 84 
                 gg+s  +y v+t++ +     + vl+r  +a  +a  +i  e + ++lL  +  p  + ++   d+ +i+l        + +l+ey+ g  l +     
  EPX70505.1  35 GGFSH-VYAVQTSSkTdgsplPAVLKRMYAAdeHALKSIKLEIDTMKLLKSS--PNIVTYY---DCSFIPLneekkdyeVLLLMEYCSGGGLIDfmnqr 127
                 44555.*****9996589*********777768*****************99..3345566...899999999999999*********99999977777 PP

                 ...HHHHHHHHHHHHHHHHHHCCHHCH.- CS
         APH  85 ...klsaaqlpellealgeflaalhqvdp 110
                    +ls+ +  +++ ++ +  aa+h+++p
  EPX70505.1 128 lqtRLSEVEVLKIISDVTQGVAAMHRLRP 156
                 77777777777777777777777777765 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.001
                 HHHHHHHH--SSS-EEEE-SS-SGGGEEEC CS
         APH 152 vlaalaallpgelptvllHgDlhpgNllvd 181
                 v + +aa  +  l++ l+H+Dl+  N+l++
  EPX70505.1 144 VTQGVAAMHR--LRPPLVHRDLKVENILLT 171
                 3333333333..5667************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (830 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       752  (0.0419432); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.69u 0.32s 00:00:01.01 Elapsed: 00:00:00.47
# Mc/sec: 5254.50
//
Query:       EPX70506.1  [L=550]
Description: ran GDP/GTP exchange factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.8e-73  242.9   4.1    5.7e-13   49.3   0.0    7.7  8  RCC1          Regulator of chromosome condensation (RCC1) rep
    1.3e-38  130.0  33.0    4.7e-08   32.6   0.8    6.8  7  RCC1_2        Regulator of chromosome condensation (RCC1) rep
    5.3e-05   23.4   0.5       0.18   12.0   0.1    3.8  4  DUF4213       Putative heavy-metal chelation
  ------ inclusion threshold ------
      0.032   14.2   0.0        5.8    7.1   0.0    3.7  4  Kelch_2       Kelch motif
      0.052   13.5   0.2         13    5.7   0.0    2.4  2  DUF3748       Protein of unknown function (DUF3748)
        5.9    6.5   9.8        7.4    6.2   0.0    4.0  5  Hira          TUP1-like enhancer of split


Domain annotation for each model (and alignments):
>> RCC1  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       2.6   7.7e+03      20      43 ..      24      47 ..      18      48 .. 0.63
   2 !   18.8   0.0   6.1e-07    0.0018       3      50 .]      70     121 ..      70     121 .. 0.91
   3 !   35.8   0.0     3e-12   8.9e-09       1      49 [.     124     186 ..     124     187 .. 0.81
   4 !   26.1   0.0   3.3e-09   9.9e-06       1      50 []     190     239 ..     190     239 .. 0.92
   5 !   38.8   0.0   3.5e-13     1e-09       2      50 .]     243     292 ..     242     292 .. 0.85
   6 !   39.1   0.0   2.8e-13   8.3e-10       1      50 []     295     349 ..     295     349 .. 0.91
   7 !   49.3   0.0   1.9e-16   5.7e-13       1      50 []     352     413 ..     352     413 .. 0.81
   8 !   28.7   0.0   4.9e-10   1.5e-06       1      49 [.     416     467 ..     416     468 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 2.6
                -..--EEEEEE-GGGTTS-EEEEEEE CS
        RCC1 20 t..esvlvPtkveglsgnrvvkvacG 43
                +  e++  P+  ++++  + vkv++G
  EPX70506.1 24 RelEDHEAPVSTKPSK--KRVKVSSG 47
                3455666688888877..66777766 PP

  == domain 2  score: 18.8 bits;  conditional E-value: 6.1e-07
                 EEEEEE--GGGTTSSSS-.--EEE.EEE-GGGTTS..-EEEEEEETTEEEEE CS
        RCC1   3 rVysWGrndyGqLGlgtt.esvlv.Ptkveglsgn..rvvkvacGddhtval 50 
                 +V+ +G ++++ LG g+  ++v + P++ ++l+++   vv+ a G+ h+++l
  EPX70506.1  70 DVFVFGTGSMNELGMGDLeVDVAYrPRLNPNLPRDkiGVVDLAVGGMHSAVL 121
                 59****************8666556********999*************986 PP

  == domain 3  score: 35.8 bits;  conditional E-value: 3e-12
                 TTEEEEEE--GGGTTSSSS---E.............EEEEE-GGGTTS.-EEEEEEETTEEEE CS
        RCC1   1 dGrVysWGrndyGqLGlgttesv.............lvPtkveglsgn.rvvkvacGddhtva 49 
                 dGrV++WG nd+  LG+ t+++               +P +v+g  ++ +v+kv+c d+ t +
  EPX70506.1 124 DGRVFTWGVNDDFALGRATKNQTdaegnaidndlleGTPNQVTGAIERlKVTKVCCSDNLTTV 186
                 9****************777444344555666665556********99***********9977 PP

  == domain 4  score: 26.1 bits;  conditional E-value: 3.3e-09
                 TTEEEEEE..--GGGTTSSSS-.--EEEEEE-GGGTTS-EEEEEEETTEEEEE CS
        RCC1   1 dGrVysWG..rndyGqLGlgtt.esvlvPtkveglsgnrvvkvacGddhtval 50 
                 +G+ +sWG  r ++G LG   t ++ + P++++++   +v +va+G dh +al
  EPX70506.1 190 NGSCFSWGtfRCSDGVLGFNATtKRAPEPVQMPLP---EVAQVAAGTDHILAL 239
                 699*******99*******9996777******999...7**********9997 PP

  == domain 5  score: 38.8 bits;  conditional E-value: 3.5e-13
                 TEEEEEE--GGGTTSSSS---E....EEEEE-GGGTTS-EEEEEEETTEEEEE CS
        RCC1   2 GrVysWGrndyGqLGlgttesv....lvPtkveglsgnrvvkvacGddhtval 50 
                 GrVy+WG++++ qLG+   +++    l+P  +++    ++v+v +G++h++a+
  EPX70506.1 243 GRVYTWGNGQQCQLGRRMMDRRrlqgLKPEPLALK---NIVAVGAGAYHSFAI 292
                 9***************6665554566889999774...9*************8 PP

  == domain 6  score: 39.1 bits;  conditional E-value: 2.8e-13
                 TTEEEEEE--GGGTTSSSS---E.....EEEEE-GGGTTS-EEEEEEETTEEEEE CS
        RCC1   1 dGrVysWGrndyGqLGlgttesv.....lvPtkveglsgnrvvkvacGddhtval 50 
                 +G+Vy+WG n   q+G+ ++e++     ++Pt+ve l+  +v++++ G +ht+al
  EPX70506.1 295 KGKVYAWGLNMTKQCGIVDEEEEeegivTKPTLVEALEPYKVKAITGGEHHTLAL 349
                 59***************9995554688888********99*************97 PP

  == domain 7  score: 49.3 bits;  conditional E-value: 1.9e-16
                 TTEEEEEE--GGGTTSSSS-........--E.......EEEEE-GGGTTS-EEEEEEETTEEEEE CS
        RCC1   1 dGrVysWGrndyGqLGlgtt........esv.......lvPtkveglsgnrvvkvacGddhtval 50 
                 dGrV++WGr+d++qLG++++        + +       ++Pt ++g s  +v++++cG +h++a+
  EPX70506.1 352 DGRVLAWGRHDRHQLGIPDDalpesltkD-EkgynytvSTPTIIPGIS--NVIQICCGTHHSLAV 413
                 9****************666666444421.2455555588********..*************96 PP

  == domain 8  score: 28.7 bits;  conditional E-value: 4.9e-10
                 TTEEEEEE--GGGTTSSSS-.--EEEEEE-GGGTTS..-EEEEEEETTEEEE CS
        RCC1   1 dGrVysWGrndyGqLGlgtt.esvlvPtkveglsgn..rvvkvacGddhtva 49 
                 dG++ysWG+++++  G+g+t e+  vPt+v++   +   v  + +G++++va
  EPX70506.1 416 DGKLYSWGSSENYEVGQGDTdEEIQVPTLVRSKAIKtaSVRVAGAGGQFSVA 467
                 9*******************7777****996544336688889999999998 PP

>> RCC1_2  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   1.1   6.9e-08   0.00021       1      28 [.     108     135 ..     108     136 .. 0.95
   2 !    8.9   1.4   0.00043       1.3       1      24 [.     174     197 ..     174     204 .. 0.92
   3 !   30.9   0.1   5.5e-11   1.7e-07       1      26 [.     226     251 ..     226     254 .. 0.94
   4 !   30.5   0.2   7.2e-11   2.2e-07       1      26 [.     279     304 ..     279     310 .. 0.91
   5 !   26.3   0.0   1.5e-09   4.4e-06       1      26 [.     336     361 ..     336     365 .. 0.89
   6 !   32.6   0.8   1.6e-11   4.7e-08       1      27 [.     400     426 ..     400     432 .. 0.86
   7 ?   -3.0   0.1       2.4   7.3e+03       4      13 ..     457     467 ..     455     467 .. 0.81

  Alignments for each domain:
  == domain 1  score: 21.0 bits;  conditional E-value: 6.9e-08
      RCC1_2   1 VksvsaGdyHscaLtedGeVlcWGsNsd 28 
                 V++++ G+ Hs +L+ dG+V++WG N+d
  EPX70506.1 108 VVDLAVGGMHSAVLSHDGRVFTWGVNDD 135
                 899*********************9976 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00043
      RCC1_2   1 VksvsaGdyHscaLtedGeVlcWG 24 
                 V++v++ d+ + ++te+G  ++WG
  EPX70506.1 174 VTKVCCSDNLTTVVTENGSCFSWG 197
                 78999******************* PP

  == domain 3  score: 30.9 bits;  conditional E-value: 5.5e-11
      RCC1_2   1 VksvsaGdyHscaLtedGeVlcWGsN 26 
                 V++v+aG +H +aLt++G+V++WG+ 
  EPX70506.1 226 VAQVAAGTDHILALTTTGRVYTWGNG 251
                 89**********************95 PP

  == domain 4  score: 30.5 bits;  conditional E-value: 7.2e-11
      RCC1_2   1 VksvsaGdyHscaLtedGeVlcWGsN 26 
                 +++v aG+yHs+a+ + G+V++WG N
  EPX70506.1 279 IVAVGAGAYHSFAINNKGKVYAWGLN 304
                 7899********************99 PP

  == domain 5  score: 26.3 bits;  conditional E-value: 1.5e-09
      RCC1_2   1 VksvsaGdyHscaLtedGeVlcWGsN 26 
                 Vk++  G  H++aL+edG+Vl+WG+ 
  EPX70506.1 336 VKAITGGEHHTLALLEDGRVLAWGRH 361
                 899999******************85 PP

  == domain 6  score: 32.6 bits;  conditional E-value: 1.6e-11
      RCC1_2   1 VksvsaGdyHscaLtedGeVlcWGsNs 27 
                 V+++++G  Hs+a+t+dG++++WGs +
  EPX70506.1 400 VIQICCGTHHSLAVTNDGKLYSWGSSE 426
                 89**********************954 PP

  == domain 7  score: -3.0 bits;  conditional E-value: 2.4
      RCC1_2   4 vs.aGdyHsca 13 
                 v+ aG+ +s+a
  EPX70506.1 457 VAgAGGQFSVA 467
                 7779**99987 PP

>> DUF4213  Putative heavy-metal chelation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       4.4   1.3e+04      11      32 ..     105     126 ..      97     127 .. 0.77
   2 !   12.0   0.1   6.1e-05      0.18       7      58 ..     168     233 ..     163     239 .. 0.72
   3 ?    4.2   0.0     0.017        50       4      33 ..     327     355 ..     325     364 .. 0.91
   4 ?    2.3   0.0     0.068     2e+02      14      32 ..     400     418 ..     393     458 .. 0.82

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 4.4
     DUF4213  11 dltVedvviGlnwtlVelsdgg 32 
                 ++ V d+ +G   ++V + dg+
  EPX70506.1 105 KIGVVDLAVGGMHSAVLSHDGR 126
                 5568889999999999999987 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 6.1e-05
     DUF4213   7 aapedltVedvviGlnwtlVelsdggaGlAyt..................eagklvgkparelaelllsw 58 
                 a+ e l+V++v++  n t V++++   G +++                  +a ++v++p+ e+a+ +  +
  EPX70506.1 168 AI-ERLKVTKVCCSDNLTTVVTEN---GSCFSwgtfrcsdgvlgfnattkRAPEPVQMPLPEVAQVAAGT 233
                 45.889*****************9...444444444444444444444777777899*******998744 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.017
     DUF4213   4 lieaapedltVedvviGlnwtlVelsdgga 33 
                 l ea+ e  +V+ ++ G + tl+ l+dg++
  EPX70506.1 327 LVEAL-EPYKVKAITGGEHHTLALLEDGRV 355
                 56788.999******************975 PP

  == domain 4  score: 2.3 bits;  conditional E-value: 0.068
     DUF4213  14 VedvviGlnwtlVelsdgg 32 
                 V ++++G++ +l++++dg 
  EPX70506.1 400 VIQICCGTHHSLAVTNDGK 418
                 889*************983 PP

>> Kelch_2  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.12   3.7e+02       4      20 ..     117     133 ..     115     145 .. 0.75
   2 ?   -0.7   0.0      0.56   1.7e+03       4      18 ..     288     302 ..     286     308 .. 0.79
   3 ?   -1.4   0.0      0.93   2.8e+03       7      20 ..     348     361 ..     344     373 .. 0.75
   4 ?    7.1   0.0    0.0019       5.8       3      20 ..     408     425 ..     406     438 .. 0.80

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.12
     Kelch_2   4 ghsssvpggkiyvvGGa 20 
                 ++++ + +g+++ +G  
  EPX70506.1 117 HSAVLSHDGRVFTWGVN 133
                 3444589********87 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.56
     Kelch_2   4 ghsssvpggkiyvvG 18 
                 ++++    gk+y +G
  EPX70506.1 288 HSFAINNKGKVYAWG 302
                 45556889******9 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 0.93
     Kelch_2   7 ssvpggkiyvvGGa 20 
                 +   +g+++ +G +
  EPX70506.1 348 ALLEDGRVLAWGRH 361
                 44669*******98 PP

  == domain 4  score: 7.1 bits;  conditional E-value: 0.0019
     Kelch_2   3 gghsssvpggkiyvvGGa 20 
                 +++ +++ +gk+y++G +
  EPX70506.1 408 HHSLAVTNDGKLYSWGSS 425
                 5677889*********98 PP

>> DUF3748  Protein of unknown function (DUF3748)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.1    0.0066        20      67     100 ..     114     147 ..     110     159 .. 0.84
   2 ?    5.7   0.0    0.0044        13      27      87 ..     300     362 ..     287     371 .. 0.74

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.0066
     DUF3748  67 GGshvhvfsgdgewvsftynDhvlkeldteeald 100
                 GG h  v s dg+  ++ +nD+    + t++++d
  EPX70506.1 114 GGMHSAVLSHDGRVFTWGVNDDFALGRATKNQTD 147
                 9********************9877777666655 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0044
     DUF3748  27 qWkydfsrrrGviveeae.pekastldalditpPytpGaLrGGshvh.vfsgdgewvsftynD 87 
                  W  ++ ++ G++ ee+e ++ +++   ++  +Py+  a+ GG h      +dg+ +++   D
  EPX70506.1 300 AWGLNMTKQCGIVDEEEEeEGIVTKPTLVEALEPYKVKAITGGEHHTlALLEDGRVLAWGRHD 362
                 688888888898877766234445555677889**********98531566788888776655 PP

>> Hira  TUP1-like enhancer of split
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.2      0.11   3.2e+02      17      37 ..     177     197 ..     171     202 .. 0.86
   2 ?    3.1   0.0     0.022        67      17      38 ..     229     250 ..     221     261 .. 0.81
   3 ?   -2.9   0.0       1.6   4.6e+03      25      39 ..     290     304 ..     278     312 .. 0.77
   4 ?    6.2   0.0    0.0025       7.4      13      37 ..     399     423 ..     389     459 .. 0.81
   5 ?   -4.7   1.6       5.5   1.6e+04     151     177 ..     507     533 ..     475     548 .. 0.41

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.11
        Hira  17 LessgsyLlavtsvgllyvWn 37 
                 +++s++   +vt++g+++ W 
  EPX70506.1 177 VCCSDNLTTVVTENGSCFSWG 197
                 68999999************6 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.022
        Hira  17 LessgsyLlavtsvgllyvWnv 38 
                 +++ ++++la+t++g++y W  
  EPX70506.1 229 VAAGTDHILALTTTGRVYTWGN 250
                 5667799*************65 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 1.6
        Hira  25 lavtsvgllyvWnvk 39 
                 +a+ ++g +y W ++
  EPX70506.1 290 FAINNKGKVYAWGLN 304
                 689999******884 PP

  == domain 4  score: 6.2 bits;  conditional E-value: 0.0025
        Hira  13 pasfLessgsyLlavtsvgllyvWn 37 
                 ++  +++ +++ lavt++g ly W 
  EPX70506.1 399 NVIQICCGTHHSLAVTNDGKLYSWG 423
                 444456667***************5 PP

  == domain 5  score: -4.7 bits;  conditional E-value: 5.5
        Hira 151 akllqrlaktllekegfenleesvtla 177
                 +k + + + ++   ++    e + t++
  EPX70506.1 507 SKPVTTESTEMQIDQQPPTAEDQTTIQ 533
                 222222333333333333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (550 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1044  (0.0582297); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.64u 0.30s 00:00:00.94 Elapsed: 00:00:00.48
# Mc/sec: 3475.46
//
Query:       EPX70507.1  [L=207]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.9e-30  103.8   9.3    2.1e-29  102.4   0.6    2.6  3  DUF2458   Protein of unknown function (DUF2458)
     0.0001   22.0   0.8    0.00018   21.2   0.8    1.3  1  DGCR6     DiGeorge syndrome critical region 6 (DGCR6) protein
  ------ inclusion threshold ------
      0.021   14.7   3.5      0.036   13.9   2.5    1.9  1  EssA      WXG100 protein secretion system (Wss), protein EssA
      0.026   13.8   0.1      0.037   13.3   0.1    1.3  1  MipZ      ATPase MipZ


Domain annotation for each model (and alignments):
>> DUF2458  Protein of unknown function (DUF2458)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.2      0.41   1.8e+03      66      86 ..       7      27 ..       2      49 .. 0.47
   2 !  102.4   0.6   4.7e-33   2.1e-29       4     125 ..      57     186 ..      55     188 .. 0.88
   3 !    7.7   0.2   0.00058       2.6     153     171 ..     187     205 ..     186     206 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.41
     DUF2458 66 evlkslggavtekkessteee 86
                ++l+ l g++++ +++++ ++
  EPX70507.1  7 KLLRELEGSSNSFSTTKETSN 27
                555555553332211111111 PP

  == domain 2  score: 102.4 bits;  conditional E-value: 4.7e-33
     DUF2458   4 tIttwpaalryVmklvaqneelqrkirkliksqheherqWwkgReaLikkqkareekkkkldevlkslgg........avtekkesst........... 83 
                 +I ++paalryV++l+a+n+e +rk++kl+ +q+++er+W+++R++Li++++++    +k++++l++l++        +                    
  EPX70507.1  57 SIQSYPAALRYVFSLQAKNPERLRKVKKLKAMQERQERDWFMERQRLIHHHQSK----NKIKSLLTPLSTsrnhassvD--------Lppstdvntlse 143
                 799************************************************999....899999999999444444330........244445555777 PP

     DUF2458  84 .eeekeaeLeeyDkkvykaskeMskaleseLreLgiPfFaike 125
                  ++e ++ L+e+Dkk++  +++M+++++++L+++ iP+F+i++
  EPX70507.1 144 gDRELQEALSEFDKKIVLLTERMYSDQRKALSDMHIPLFLIPS 186
                 79999***********************************986 PP

  == domain 3  score: 7.7 bits;  conditional E-value: 0.00058
     DUF2458 153 eeeLkelqrrmlelLeDLc 171
                 +e L+e q+++++lL+DL+
  EPX70507.1 187 SEPLTEEQSKLIQLLQDLF 205
                 789***************8 PP

>> DGCR6  DiGeorge syndrome critical region 6 (DGCR6) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.8     4e-08   0.00018      63     169 ..      82     188 ..      79     206 .. 0.80

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 4e-08
       DGCR6  63 vkgLleiqhltekhLykqRlklenehkvekkelekkikeaeeackah..nlallkakqsrelealekrikeeqkemDkkivlelDqkvaDqqstLekAG 159
                 vk L  +q+ +e++ +  R++l + h+ ++k   k    +  + ++h   ++l   +  ++l   ++ ++e   e Dkkivl  +++  Dq   L    
  EPX70507.1  82 VKKLKAMQERQERDWFMERQRLIHHHQSKNK--IKSLLTPLSTSRNHasSVDLPPSTDVNTLSEGDRELQEALSEFDKKIVLLTERMYSDQRKALSDMH 178
                 89999*****************988876544..344566666676662257888899999999999******************************999 PP

       DGCR6 160 vpGFYvtenp 169
                 +p F + +  
  EPX70507.1 179 IPLFLIPSSE 188
                 9999886655 PP

>> EssA  WXG100 protein secretion system (Wss), protein EssA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   2.5   8.1e-06     0.036      32      70 ..      20      59 ..       7      93 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 8.1e-06
        EssA 32 kelkEtELdkaaieLFteeveeeinkkkkaEk.keieelk 70
                  +kEt  dk++ + Ft+e+e  in++k+a + + ie+++
  EPX70507.1 20 STTKETSNDKNSSKTFTTELESSINNQKAAQElAFIESIQ 59
                5689********************9988775415566665 PP

>> MipZ  ATPase MipZ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.1   8.2e-06     0.037     157     202 ..      77     121 ..      32     125 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 8.2e-06
                 HHHHHHHHTTTTT-SS--EEEEEEESB-S--HHHHHHHHHHHHHHH CS
        MipZ 157 elvwearkkrakaerkevdWvvlrnrlsalearnkkkveealeeLs 202
                 e +++++k +a++er+e dW + r rl +   + k+k+++ l+ Ls
  EPX70507.1  77 ERLRKVKKLKAMQERQERDWFMERQRLIHH-HQSKNKIKSLLTPLS 121
                 668899********************9765.455667888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1737  (0.0968821); expected 358.6 (0.02)
Passed bias filter:                      625  (0.0348597); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 1422.15
//
Query:       EPX70508.1  [L=338]
Description: rho-type GTPase activating protein Rga5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.3e-36  125.7   0.0    2.1e-36  125.1   0.0    1.2  1  RhoGAP           RhoGAP domain
  ------ inclusion threshold ------
      0.013   14.5   2.1      0.017   14.2   2.1    1.1  1  CytochromB561_N  Cytochrome B561, N terminal
      0.041   13.4   2.3      0.061   12.9   0.7    2.0  2  Plasmo_rep       Plasmodium repeat family


Domain annotation for each model (and alignments):
>> RhoGAP  RhoGAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.1   0.0   3.5e-40   2.1e-36       1     149 [.      55     207 ..      55     210 .. 0.97

  Alignments for each domain:
  == domain 1  score: 125.1 bits;  conditional E-value: 3.5e-40
                 BHHHHHHHHHHHHHTTTSTTTTTS-S-HHHHHHHHHHHHHTGGGCT..TTTTSCHHHHHHHHHHHHHHSSSTTTTGGHHHHHHH..HHTSSSHHHHHHH CS
      RhoGAP   1 PiivekcvefiekrgldtegiyRvsgskarvkelreafdkgkavds..dleeedvhavaslLKrfLrelpepLltkelyeelie..aaksedeeerlea 95 
                 P++v+kc  f+++++  ++gi+Rv+gs++r++ l++af++g++  +   ++ ++vh+ a++++rf++ +p+++++ e+ye + e  + ++ ++ er+e 
  EPX70508.1  55 PAVVAKCGFFLKEKATLSKGIFRVNGSSKRIQLLQKAFSSGPDYGRslIWDGYTVHDAANVFRRFINLMPDHVIPLEYYELFREpmTISNLTDMERVEL 153
                 99******************************************9999***********************************8788899********* PP

                 HHHHHTTS-HHHHHHHHHHHHHHHHHHHTHHHH---HHHHHHHHHHHHHT-TSS CS
      RhoGAP  96 lkellekLPkenrdtLryLlehLkrvaenskenkMtaknLaivfaPtLlrpkse 149
                 +++ +++LP +nr++L yLl++L  +a+ns+ n M a+nLa +f+P +l+++++
  EPX70508.1 154 YRQRIDNLPIPNRQLLLYLLDLLAVFASNSHINLMPAENLAAIFQPGILSHPNH 207
                 *************************************************99875 PP

>> CytochromB561_N  Cytochrome B561, N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   2.1   2.8e-06     0.017     108     218 ..     218     321 ..     163     334 .. 0.70

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.8e-06
  CytochromB561_N 108 qlkllglksndssvvtesrkkpPksksslqasssevl..vplhqsvsssssesrkgsdkssagsgkkleSistsskssasp.svylrss.lvdl 197
                      q +ll l +++ s++++     P s+   ++ +s++   +  ++ v++s ++sr++  +s++g  k  +S++ +s++  s+ +++ ++   ++l
       EPX70508.1 218 QNALLFLINHQGSFIKT----IPLSSLP-PLVPSPTSpdASSSTLVAQSDHNSRVQVYSSKSGTIKRWRSFNRQSRKNFSTaDILDHGTdDQKL 306
                      55666666666667766....5554433.22222222124458899***********************************9***888875555 PP

  CytochromB561_N 198 sssplssnlsaensvqsSeei 218
                      s sp +      ns++sS+ +
       EPX70508.1 307 SGSPRK------NSPRSSSLT 321
                      555555......555555433 PP

>> Plasmo_rep  Plasmodium repeat family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.7     1e-05     0.061       2      16 ..     205     219 ..     204     220 .. 0.96
   2 ?   -1.4   0.0       0.3   1.8e+03       5      10 ..     268     273 ..     268     274 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1e-05
  Plasmo_rep   2 sDnEvYspkqEieqN 16 
                 ++ EvYs ++Ei+qN
  EPX70508.1 205 PNHEVYSKDYEISQN 219
                 89************* PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.3
  Plasmo_rep   5 EvYspk 10 
                 +vYs+k
  EPX70508.1 268 QVYSSK 273
                 8****8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       570  (0.0317921); expected 358.6 (0.02)
Passed bias filter:                      484  (0.0269954); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2387.33
//
Query:       EPX70509.1  [L=461]
Description: thiamine-repressible acid phosphatase Pho4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-54  185.1   0.0      3e-54  184.9   0.0    1.1  1  His_Phos_2  Histidine phosphatase superfamily (branch 2)


Domain annotation for each model (and alignments):
>> His_Phos_2  Histidine phosphatase superfamily (branch 2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  184.9   0.0   1.6e-58     3e-54       1     383 []      61     403 ..      61     403 .. 0.92

  Alignments for each domain:
  == domain 1  score: 184.9 bits;  conditional E-value: 1.6e-58
                 EEEEEEEEEE--SBB-SHHHHHHHHHHHHHHHH.........HHCHHTGCCGGGGT..........--SSSTTS.B-HHHHHHHHHHHHHHHHHCHTCC CS
  His_Phos_2   1 eLksvvvviRHGdRtPkqkvkksvtspiflsllkkhkeKlkqlktalekkghfpgtyrkv.eveklqlilkwggelthaGrkqaeelGrqfrqrYplgL 98 
                 e+++v+++ RHG+R+P ++  +s    +   +        k+l+++l  ++  p++   + +++    ++   ++l++ Gr++++e+Gr + +rY+ +L
  EPX70509.1  61 EIRQVHILQRHGSRNPASDDGLSSAIKLVEMQD-------KLLNGSLPINYTIPNNPFRFvRSWVPVINIRNTDQLSSMGRVELFEMGREVFTRYR-EL 151
                 79******************9655554444444.......789***********998666766655555555556*********************.** PP

                 HTTSS--TTEEEEEESSHHHHHHHHHHHHHHCHCCC---S-TTSTTGGG-TTTTCCCEEEHHHHCCCCHHCTTSHHTCHHHCHHHTGGHCHHHHCHCCC CS
  His_Phos_2  99 lrlhltykdlkirassegRviaSAaafakGllglegeltdllskdkdllddsnaakdlldeakkklkelltegaeacpafewpikvakrvdelvkylke 197
                 +++    ++++i ++ ++Rv +SA+++ +G++g+e                +++++++l e +++ ++++++++++cp +++ +   k+v+e+   +++
  EPX70509.1 152 FDA----DVYYINTAAQQRVKESAEWYSYGMFGEEM--------------ANKTKFTYLAE-DESPGSNSLSNYNSCPVYAENNIDLKEVNEAGLAWRN 231
                 **9....89***********************8888..............88999999999.6677778889**********9**************** PP

                 CCHHHHHHHCHHHCTTEEEE-HHHHHHHHHHHHHHHHHHCT-TTGGGCTH..HCHHHHHHHHHHHH.HHHC........TTTCCCCHHHHHHHHHHHHH CS
  His_Phos_2 198 dmdeniakrleqlcpgesnllakerwdklercfyeknkfdiskicdlydemkydalhnrylkdlee.lyklakvipqEygigpeeklkiGllllnpllk 295
                 ++ ++i++rl+ +++++ nl+++++ + + +c+ye   +d s++c l++   +d  +++y  d+e+ ly+         g+++++  + G+++++ l++
  EPX70509.1 232 VFLPSIVNRLNPYFSNY-NLTNEDVTSFFYLCAYELTLKDESDFCSLFNP--SDIMNFEYSYDVEYsLYG---------GPSSKWVNVLGGPYVQSLAN 318
                 *************8887.********************************..*************97777.........7******************* PP

                 HHCTSSSEECCSCCCECS-SEEEEEE-HHHHHHHHHHCTTTTTBTTB.SSS......TTT..HCCCS-CT-EEEEEEEEETCTTTEEEEEEEC CS
  His_Phos_2 296 kilndlqrtreeatperhvrlrlyfthdshiysllnaLglpeelagedslaa.....ldrlsaspelpymsqivfelyedssekkfyvrllls 383
                 ++++  ++         +++++l fthd +i+++ +aLg++ ++++e+ l +       ++++s+++p+++++++el+ ++++k +yvr+l++
  EPX70509.1 319 SLRSVYNESD-------YQKVFLAFTHDGQIIPVETALGFFPDITPEHPLPVthnpySYSMKTSSFVPFAGNLITELFHCQDQK-YYVRHLVN 403
                 ********99.......*********************************99***99999********************5555.*****997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (461 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       370  (0.020637); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.28s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 3197.24
//
Query:       EPX70510.1  [L=625]
Description: STE/STE20/YSK protein kinase Nak1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.1e-65  220.2   0.0    4.2e-65  219.7   0.0    1.2  1  Pkinase         Protein kinase domain
    6.4e-45  153.5   0.0    9.7e-45  152.9   0.0    1.2  1  Pkinase_Tyr     Protein tyrosine kinase
      2e-07   30.2   2.2    1.2e-06   27.6   0.0    2.7  3  Pkinase_fungal  Fungal protein kinase
     0.0012   18.2   0.0      0.003   16.9   0.0    1.7  1  Kinase-like     Kinase-like
  ------ inclusion threshold ------
      0.028   14.0   0.0      0.067   12.8   0.0    1.6  1  RIO1            RIO1 family
      0.046   13.1   0.0      0.085   12.2   0.0    1.4  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
        0.1   12.2   0.1       0.27   10.9   0.0    1.8  2  FTA2            Kinetochore Sim4 complex subunit FTA2
       0.11   11.5   0.0       0.88    8.6   0.0    2.1  2  Seadorna_VP7    Seadornavirus VP7
        9.2    5.1  11.0          1    8.3   0.1    2.8  3  Haspin_kinase   Haspin like kinase domain


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  219.7   0.0   2.1e-68   4.2e-65       1     264 []      10     264 ..      10     264 .. 0.93

  Alignments for each domain:
  == domain 1  score: 219.7 bits;  conditional E-value: 2.1e-68
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS...CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS-- CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklk...hpnivrlyevfeekdelylvleyveggeladllerkgsls 96 
                 y+kle +G+Gs+G Vyk+++++t++ivA+K+++ + a+++  +++++Ei++l +lk   ++niv++ +++   ++l+++++y++gg++ +l+e  g+++
  EPX70510.1  10 YTKLEIVGRGSYGAVYKGFRNATKEIVAIKVLNLDTAEDEV-SDIQKEITVLSELKqreSENIVKYHGSYLVGTDLWIIMDYCQGGSVRTLME-AGQIT 106
                 7899*********************************9988.59***********99999*****************************9997.699** PP

                 HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.BCTTTSCGGGS-HHHH.TTSCBSHHHHHHHHHHHHHHHHHS CS
     Pkinase  97 eeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.ltsfvgtseYlAPEvl.keneyskkvDvWslGvilyelltg 193
                 e  ++ i++++l++l+++H++giiHrD+K +NiL++ +g++K++DFG+a+e++ +s+  t+f+gt++++APEv+ +++ey   +D+WslG++ ye+ tg
  EPX70510.1 107 EPYISIILRETLQALKFIHHAGIIHRDIKAANILVSVSGKVKLCDFGVAAEININSRkRTTFIGTPYWMAPEVIrDGQEYNVMADIWSLGITAYEIATG 205
                 ****************************************************9877779***************778********************** PP

                 S-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 194 kppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 +pp ++e          d +++++ i +  +   + + ++s+ +kd++ ++l++ p+kRl a+el++++++
  EPX70510.1 206 SPPHAKE----------DPFQAVFLIAH--TPPPKLEGNFSSLLKDFIASCLNVVPEKRLDASELIKSKFI 264
                 *****22..........23334555554..3566777899***************************9986 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.9   0.0   4.9e-48   9.7e-45       5     257 ..      14     260 ..      10     261 .. 0.94

  Alignments for each domain:
  == domain 1  score: 152.9 bits;  conditional E-value: 4.9e-48
                  EEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS...-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTT CS
  Pkinase_Tyr   5 kklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkkl...khpnivkllgvctkeepllivteyvkgGdLlkfLrkkekek 99 
                  + +G+G++G V++g  +     +++ Va+K+l+ ++ e+e +++ +e++++++l   + +nivk++g ++ +  l+i+++y++gG++++ +++    +
   EPX70510.1  14 EIVGRGSYGAVYKGFRN----ATKEIVAIKVLNLDTAEDEVSDIQKEITVLSELkqrESENIVKYHGSYLVGTDLWIIMDYCQGGSVRTLMEAG---Q 104
                  779***********999....8999**************************999644568*****************************99987...9 PP

                  SBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE.EEHHHHHHHHHHHHH CS
  Pkinase_Tyr 100 ltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk.ftsksDvWsfGvllw 196
                  +t   +  +  +  ++++++++  ++Hrd+ a N+L+s + +vk++DfG+a +i  + + +k+++      WmapE++++++ +++ +D+Ws G++ +
   EPX70510.1 105 ITEPYISIILRETLQALKFIHHAGIIHRDIKAANILVSVSGKVKLCDFGVAAEI--NINSRKRTTFIGTPYWMAPEVIRDGQeYNVMADIWSLGITAY 200
                  99999999999*******************************************..667778888888999********9877*************** PP

                  HHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 197 EiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfselve 257
                  Ei+t g+ p+++ ++ +++  + +    +   + ++ l++++ +c++  pe+R + sel++
   EPX70510.1 201 EIAT-GSPPHAKEDPFQAVFLIAHTPPPKLEGNFSSLLKDFIASCLNVVPEKRLDASELIK 260
                  ****.*************************************************9999875 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0     0.078   1.5e+02     183     211 ..      52      80 ..       9      97 .. 0.68
   2 !   27.6   0.0   6.1e-10   1.2e-06     312     397 ..     114     192 ..      95     195 .. 0.85
   3 ?   -0.9   0.3      0.28   5.5e+02     213     264 ..     307     391 ..     251     478 .. 0.58

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.078
  Pkinase_fungal 183 erksEaelLkkaeergvegvarlvahedv 211
                     + ++E ++L + ++r+ e+++++ ++  v
      EPX70510.1  52 DIQKEITVLSELKQRESENIVKYHGSYLV 80 
                     345899****************9887765 PP

  == domain 2  score: 27.6 bits;  conditional E-value: 6.1e-10
  Pkinase_fungal 312 lrDaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlkgee.HsyrhDL 397
                     lr+ +++++  + +agi+HrDi + Nil+       + k  L D+ +a e++ +s+++   + +GT+++ma ev+++++  +++ D+
      EPX70510.1 114 LRETLQALKFIH-HAGIIHRDIKAANILVS-----VSGKVKLCDFGVAAEININSRKR--TTFIGTPYWMAPEVIRDGQeYNVMADI 192
                     788899999999.****************9.....789999***********755544..689*************75448887776 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.28
  Pkinase_fungal 213 ekdddi.aeiRkgldvtkaekfrskrkvvsssssqe................................lsskaevklkksesskk 264
                     +++d+  + + +g+++ + ++  ++++ +ss s ++                                 ss+ +   +++ess++
      EPX70510.1 307 QENDTSeTAFDDGWEFGTIKQSPQQNSPLSSGSATPtskhfssmsnsgaendshpllqlfqnssisneDSSHMSEGVTDQESSTE 391
                     4455555667777777777333333222222222223444444444444444444444433333333322222223333333333 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   1.5e-06     0.003     159     253 ..     123     212 ..      81     243 .. 0.78

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 1.5e-06
  Kinase-like 159 nLqakglvhgkftvdnllldekgglmlggftaLvragtkvvlseve....kgfaPpEllgsrggytrknktkmthkldaWqlGlviyriwclklPltl 252
                   +++ g++h ++++ n+l    g+++l +f+       + +   +       +  pE++            ++    d W lG+++y i+    P  +
   EPX70510.1 123 FIHHAGIIHRDIKAANILVSVSGKVKLCDFGVAAEININSRK-RTTfigtPYWMAPEVIRD--------GQEYNVMADIWSLGITAYEIATGSPPHAK 211
                  4689**************************977666555552.222122233455676666........34677799************998888766 PP

  Kinase-like 253 a 253
                   
   EPX70510.1 212 E 212
                  5 PP

>> RIO1  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   3.4e-05     0.067      83     154 ..      86     157 ..      49     166 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3.4e-05
                 EEEE--EETTEEGGBHHHCG-..HHHHHHHHHHHHHHHHHHHHTSTEEESS-STTSEEEETT.EEEE--GTTEEE CS
        RIO1  83 lvmefigedgvaapklkdvee..eeeaeelyeevleemrklykeaglvHaDLSeyNvlvded.kvviIDvsQave 154
                 ++m++++  g  + +l ++ +  e  ++ +++e+l++  k++++ag++H D+   N+lv+   kv + D++ a e
  EPX70510.1  86 IIMDYCQ--GGSVRTLMEAGQitEPYISIILRETLQA-LKFIHHAGIIHRDIKAANILVSVSgKVKLCDFGVAAE 157
                 899**99..8999999998844466777888888885.56667****************9888**9*99987665 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   4.3e-05     0.085     129     177 ..     119     163 ..     105     167 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 4.3e-05
         Kdo 129 rliaklhragvnHadlyaknillqqeeeeeaeiwliDldkarlrlradr 177
                 ++ + +h ag+ H+d+ a nil+   +    ++ l D+  a++   + r
  EPX70510.1 119 QALKFIHHAGIIHRDIKAANILVSVSG----KVKLCDFGVAAEININSR 163
                 566779********************9....999999987777665555 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00013      0.27     170     214 ..     106     155 ..      32     156 .. 0.81
   2 ?   -3.4   0.0         3   5.9e+03     144     180 ..     436     471 ..     406     480 .. 0.61

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00013
        FTA2 170 qeelevsqlpkllrdlkklhklgIvvrDlkeenyi.....dgkLvDlsaa 214
                  e+ +  +l++ l+ lk +h +gI++rD+k+ n++     + kL+D++ a
  EPX70510.1 106 TEPYISIILRETLQALKFIHHAGIIHRDIKAANILvsvsgKVKLCDFGVA 155
                 566667789999*********************98444333479999865 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 3
        FTA2 144 sralgeedgkkrpiraIVKelellkeqeelevsqlpk 180
                 + + +++++ krp+  +V+  ++ +++  +++s ++ 
  EPX70510.1 436 NIRGSTDQNMKRPLPRVVQR-QMNMGKRGISMSPMKS 471
                 23344566778888888888.7777777777776665 PP

>> Seadorna_VP7  Seadornavirus VP7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.0   0.00044      0.88     149     188 ..     116     153 ..      99     168 .. 0.84
   2 ?   -0.2   0.0       0.2     4e+02     212     252 ..     238     276 ..     234     288 .. 0.72

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00044
  Seadorna_VP7 149 aglkdLmdfhsestnllhGDcnpenlmcDknGylklvDPv 188
                     l++L+ +h  + +++h D++  n++    G +kl D +
    EPX70510.1 116 ETLQALKFIH--HAGIIHRDIKAANILVSVSGKVKLCDFG 153
                   4689999999..9************************976 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.2
  Seadorna_VP7 212 kvfvlsllelveklrkieleeifikdlYldLdevasdfnve 252
                   k f+ s+l++v ++r ++ +e+ ik  +++ +  +++ ++ 
    EPX70510.1 238 KDFIASCLNVVPEKR-LDASEL-IKSKFIKQHARQPENELC 276
                   67999****998876.677777.788888766666666554 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0      0.01        20     109     159 ..      17      77 ..       2      97 .. 0.70
   2 ?    8.3   0.1    0.0005         1     230     254 ..     131     155 ..     110     169 .. 0.89
   3 ?   -5.2   4.4       6.2   1.2e+04      20      52 ..     355     387 ..     336     426 .. 0.67

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.01
  Haspin_kinase 109 seklssevyqtke..kdkevvlKvipl........evledvtiskelslkelkslklvkgt 159
                    ++++++ vy+     +++ v++Kv+ l        ++++++t+  el+  e++++   +g+
     EPX70510.1  17 GRGSYGAVYKGFRnaTKEIVAIKVLNLdtaedevsDIQKEITVLSELKQRESENIVKYHGS 77 
                    7889999999766456778999*****6666555555555555555555666666555555 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.0005
  Haspin_kinase 230 HRdLhldniLvdknlnvtlidlkls 254
                    HRd++  niLv  +++v l+d+ ++
     EPX70510.1 131 HRDIKAANILVSVSGKVKLCDFGVA 155
                    *********************9876 PP

  == domain 3  score: -5.2 bits;  conditional E-value: 6.2
  Haspin_kinase  20 khktshssLqkfsssssessssnkislPvkdqv 52 
                     +  sh  Lq f++ss +++ s ++s  v dq 
     EPX70510.1 355 AENDSHPLLQLFQNSSISNEDSSHMSEGVTDQE 387
                    345588888888888888888888888888873 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (625 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       616  (0.0343577); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.68u 0.29s 00:00:00.97 Elapsed: 00:00:00.48
# Mc/sec: 3905.34
//
Query:       EPX70511.1  [L=348]
Description: hypothetical protein SOCG_04695 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (348 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       592  (0.0330191); expected 358.6 (0.02)
Passed bias filter:                      291  (0.0162307); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 2242.61
//
Query:       EPX70512.1  [L=1291]
Description: rictor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-88  295.9   4.2      1e-87  294.6   1.7    2.3  2  RICTOR_N    Rapamycin-insensitive companion of mTOR, N-term
    3.6e-39  132.7   2.5    1.6e-33  114.6   0.8    5.0  4  RICTOR_M    Rapamycin-insensitive companion of mTOR, middle d
    2.8e-33  114.5   0.2    2.8e-31  108.1   0.1    3.1  2  RasGEF_N_2  Rapamycin-insensitive companion of mTOR RasGEF_N 
    9.4e-28   96.3   0.1    7.3e-26   90.2   0.0    3.6  3  RICTOR_V    Rapamycin-insensitive companion of mTOR, domain 5
  ------ inclusion threshold ------
      0.024   15.1   0.0        5.2    7.7   0.0    3.4  3  HEAT_EZ     HEAT-like repeat
      0.046   13.7   3.0        7.1    6.7   0.9    2.8  2  Laminin_II  Laminin Domain II
      0.053   13.8   0.1         34    5.0   0.1    4.3  4  HEAT        HEAT repeat
      0.067   13.9   1.8        2.5    8.9   1.8    2.7  1  FliD_N      Flagellar hook-associated protein 2 N-terminus


Domain annotation for each model (and alignments):
>> RICTOR_N  Rapamycin-insensitive companion of mTOR, N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  294.6   1.7   4.6e-91     1e-87       2     373 .]     221     599 ..     220     599 .. 0.90
   2 ?    0.9   0.0      0.08   1.8e+02     191     250 ..     736     793 ..     715     808 .. 0.69

  Alignments for each domain:
  == domain 1  score: 294.6 bits;  conditional E-value: 4.6e-91
    RICTOR_N   2 ekandLvkllkrhpelkydl.sleellkriqfmLldeskevraagyRilRylisdseslklllklkldiliirSLek.dsksevEReqALkLiraflei 98 
                  +an+++++l++hpe +  l  +  +l+++q+mL+ +  +v a+ yRi+R l +d++ + ++++l+l +l+ +S+      +e+E+ qA++Lir+++  
  EPX70512.1 221 HNANNICQYLHEHPEKD-CLpRAYYMLPTLQIMLTLNIPDVSACVYRIIRNLFTDPSAFVIFQSLNLTWLLSKSIISaGPTYEAEKAQAFRLIRTLYAF 318
                 689***********844.445*****************************************************98615569****************9 PP

    RICTOR_N  99 kkgake..lsksvvralvavaehedDrlrricletLaElllldpelvveagGlrvllnalld..gsselaesllvallylLdspetrkylrkgldleil 193
                 ++++++  +  +++++l+a++eh+ D  r i+ etL+El++l+p+++++a+Glrvl+++l+d   s +la + ++al+ylLd+pet +yl   +d+ il
  EPX70512.1 319 SCTEEHerMLLGITHTLIAICEHSSDANRGIASETLIELMILKPQILLRANGLRVLISSLVDgsVSEDLAATSALALIYLLDNPETCRYLSLPYDIGIL 417
                 99887789******************************************************6556789****************************** PP

    RICTOR_N 194 lspftd........slekekkkesneeklqnsakaisslLksWsGlialsmnnfrplksLvsaLripslevrkaildllfdllrikppewses.flagr 283
                 lspft+        +  +  + e+++  +++sak+is+lL sW+Gl+a+s ++f++l+sLv++Lr+p +  r+ i+dl++ +++++  +++e+  +ag+
  EPX70512.1 418 LSPFTSpslydlysP--SGGQPEQTSRAIRSSAKIISVLLNSWPGLLAFSTEDFQALRSLVDSLRVPTFTARNDIIDLFLLIFKVDRSTVHETcIIAGK 514
                 **********98543..44555556666*****************************************************************999**9 PP

    RICTOR_N 284 rlttransksqkkqeeneaeesaelkkkeserkrenlvdhylallllvlieaglleaLvevieeesdsslsrkatlLlgellklanrlLP 373
                 +   +     + ++  +e e+s+ ++ + s rk+  l +h++alll++++e gl+e++v+vi++++d++l +kat+Llge+l+l+++lLP
  EPX70512.1 515 KHFPA-----KGQNIIEEIEASTLNLCDGSYRKFLALNHHFTALLLFIFLELGLVESIVCVIRANDDQTLCKKATYLLGEVLRLSDQLLP 599
                 66663.....23333333334444455666667888*****************************************************9 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.08
    RICTOR_N 191 eillspftdslekekkkesneeklqnsakaisslLksWsGlialsmnnfrplksLvsaLr 250
                  +   pf+d+ ++ k+ ++n++ ++  + ++ +lL + +G+ +ls ++   +k++ +aL+
  EPX70512.1 736 LSFYKPFSDRFSSIKNTTANHKYINVGCLVFKTLLANPEGVKYLSESK--LIKQIAEALS 793
                 3445788887777777888888888888899999***********777..5555555553 PP

>> RICTOR_M  Rapamycin-insensitive companion of mTOR, middle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.21   4.7e+02      28      54 ..     767     793 ..     751     802 .. 0.81
   2 !  114.6   0.8   6.9e-37   1.6e-33       5     103 ..     802     900 ..     797     901 .. 0.96
   3 !    6.5   0.0    0.0032       7.1      25      62 ..    1037    1075 ..    1035    1081 .. 0.87
   4 !    5.6   0.0    0.0058        13      18      53 ..    1120    1155 ..    1110    1171 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.21
    RICTOR_M  28 GvlsssknGlklLekwkiftllyklve 54 
                  +l ++++G+k L+++k+++ + + ++
  EPX70512.1 767 KTLLANPEGVKYLSESKLIKQIAEALS 793
                 578999************999877654 PP

  == domain 2  score: 114.6 bits;  conditional E-value: 6.9e-37
    RICTOR_M   5 agepllskerleetlsrgYfkfiGvlsssknGlklLekwkiftllyklvelksrddllklilssldysvdghiRiilskaLtnssekiRlyatkhLrkl 103
                   +p++sk+rl++tl++gYf+++ vlss+k+G ++Le+w+ift+ly+l+e ++rddll+ +l+++dy+++gh+Rii+skaL ++++++Rl at+hL +l
  EPX70512.1 802 VANPIFSKQRLQTTLVHGYFSMLKVLSSQKEGHAILERWRIFTTLYHLAEIRNRDDLLICFLTNVDYRLEGHSRIIFSKALSTAQQSVRLRATRHLLTL 900
                 4589********************************************************************************************876 PP

  == domain 3  score: 6.5 bits;  conditional E-value: 0.0032
    RICTOR_M   25 kfiGvlsssknGlklLekwkiftllyklvelks.rddll 62  
                   f G l +s++G ++Le ++ f  +++++++ + + dll
  EPX70512.1 1037 HFYGELVKSPEGCSVLESSGHFASFMDILKQYDgSTDLL 1075
                  68899***********************99887666655 PP

  == domain 4  score: 5.6 bits;  conditional E-value: 0.0058
    RICTOR_M   18 tlsrgYfkfiGvlsssknGlklLekwkiftllyklv 53  
                  t+  + f  +G++s++ +G+++L++ + ++l+  + 
  EPX70512.1 1120 TVRGTAFFVLGLISRTGRGVQILSNLHWYSLMSLMG 1155
                  556667889*******************99988774 PP

>> RasGEF_N_2  Rapamycin-insensitive companion of mTOR RasGEF_N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0     0.069   1.5e+02      54      81 ..     760     787 ..     722     793 .. 0.80
   2 !  108.1   0.1   1.2e-34   2.8e-31       2     100 ..     910    1009 ..     909    1011 .. 0.98

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.069
  RasGEF_N_2  54 eigslLllkllstssGfkylqelnfvee 81 
                 ++g l++ +ll+ ++G+kyl+e++ +++
  EPX70512.1 760 NVGCLVFKTLLANPEGVKYLSESKLIKQ 787
                 56777888899************99987 PP

  == domain 2  score: 108.1 bits;  conditional E-value: 1.2e-34
  RasGEF_N_2    2 fekWgiellvnqLydqsrevvaaaleiLeeacddk.eslevlvelkpslqhlgeigslLllkllstssGfkylqelnfveeeldkWiekkneeYvkl 97  
                  +++W+i+ll+ qLyd+s ev++ a+++L+++c ++ + l ++v+l+psl hlg+igs+Lll++l+t+ Gf+yl+e++f+e+eld+W +++ne Yv+l
  EPX70512.1  910 LNHWAISLLIFQLYDPSLEVCQIAVKALDDVCAKNeSLLAQVVQLQPSLAHLGDIGSPLLLRFLATTIGFHYLSEISFIEHELDNWYHHRNEVYVDL 1006
                  799******************************998999********************************************************** PP

  RasGEF_N_2   98 vEe 100 
                  +E+
  EPX70512.1 1007 IEQ 1009
                  **7 PP

>> RICTOR_V  Rapamycin-insensitive companion of mTOR, domain 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0       0.4   9.1e+02      16      36 ..     772     792 ..     769     797 .. 0.86
   2 ?   -0.3   0.0      0.59   1.3e+03      49      67 ..     821     839 ..     818     841 .. 0.89
   3 !   90.2   0.0   3.3e-29   7.3e-26       2      70 ..    1079    1147 ..    1078    1148 .. 0.98

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.4
    RICTOR_V  16 selGielldeydivedivela 36 
                  ++G+++l+e++++++i+e  
  EPX70512.1 772 NPEGVKYLSESKLIKQIAEAL 792
                 689**************9875 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.59
    RICTOR_V  49 fyvLglissteegaeiLde 67 
                 f +L ++ss +eg+ iL++
  EPX70512.1 821 FSMLKVLSSQKEGHAILER 839
                 778999***********85 PP

  == domain 3  score: 90.2 bits;  conditional E-value: 3.3e-29
    RICTOR_V    2 klKaaLWaiGhigsselGielldeydivedivelaeespvlslRGtafyvLglissteegaeiLdelgW 70  
                  +lK+aLWaiG+ig++e G+++l+e+d v+ iv+ aees++ ++RGtaf+vLglis+t +g++iL++l+W
  EPX70512.1 1079 RLKSALWAIGNIGKAETGAYFLEEHDSVPLIVKFAEESSIPTVRGTAFFVLGLISRTGRGVQILSNLHW 1147
                  79******************************************************************* PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       2.4   5.5e+03      15      53 ..     317     355 ..     305     357 .. 0.77
   2 ?    3.1   0.0     0.061   1.4e+02      18      52 ..     907     937 ..     887     937 .. 0.84
   3 ?    7.7   0.0    0.0023       5.2       5      54 ..    1081    1131 ..    1076    1132 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 2.4
     HEAT_EZ  15 aggepellqplvpeilpaLlalLnddsdeVRaaAagaLg 53 
                 a+ + e  + ++  i   L+a  +++sd+ R+ A  +L 
  EPX70512.1 317 AFSCTEEHERMLLGITHTLIAICEHSSDANRGIASETLI 355
                 566666667777778899999999999999999988886 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.061
     HEAT_EZ  18 epellqplvpeilpaLlalLnddsdeVRaaAagaL 52 
                 +++l +    +++ +L+  L d+s eV + A+ aL
  EPX70512.1 907 NDNLNH----WAISLLIFQLYDPSLEVCQIAVKAL 937
                 555555....7899******************998 PP

  == domain 3  score: 7.7 bits;  conditional E-value: 0.0023
     HEAT_EZ    5 raAawaLGrlaggepellqplvpeilpaLlalLnddsd.eVRaaAagaLgn 54  
                   +A+wa+G++   e  +  ++  + +p+ +++ + +s  +VR++A   Lg 
  EPX70512.1 1081 KSALWAIGNIGKAETGAYFLEEHDSVPLIVKFAEESSIpTVRGTAFFVLGL 1131
                  58*******999999999999************99999899****999986 PP

>> Laminin_II  Laminin Domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.9    0.0032       7.1      24     103 ..      13     101 ..       2     106 .. 0.77
   2 ?    6.3   0.1    0.0039       8.8      22      85 ..     109     173 ..      99     180 .. 0.75

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0032
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTTTTGGGHH..HHHHHHHH..........HHHHHHHHHHHHHHHH CS
  Laminin_II  24 qnlentkeklseinrsveetnekvkdankairdArrsvkkLeklapqLldklk..elkqleeasss.......lsdniseikelIaqAR 103
                 +n ++ ++ + ++ + v++ +ekv+++++ ++  r + +k e+l+++   ++k  +++ + + + +         ++i eik  I   R
  EPX70512.1  13 ANCQESSSRMDKVPGIVKNYDEKVDQLKEKLDNKRAAYRKTERLLNNFSTRFKhePIERRASLKDNlesdlesCRRSIREIKLSIGNFR 101
                 57788899999999999999****************************99996436887766666644455555666666666666555 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0039
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XX--TTTTTGGGHHHHHHHHHH. CS
  Laminin_II  22 lsqnlentkeklseinrsveetnekvkdankairdArrsvk...kLeklapqLldklkelkqleeas 85 
                  +  +  ++ +l e++++  etn+k+++++    d+ +s k   ++   ++ ++ ++  +++ e++ 
  EPX70512.1 109 AESGITGWNPSLPEVQNT--ETNAKIQSSTSLQTDVADSGKeglNISSRLDPIVTQFVAINKAEDED 173
                 566788999999******..*******66665555544444222788999**********9998875 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0         3   6.8e+03       4      16 ..     267     279 ..     264     282 .. 0.74
   2 ?    5.0   0.1     0.015        34       4      28 ..     917     941 ..     914     943 .. 0.84
   3 ?   -1.3   0.0       1.7   3.8e+03      19      29 ..    1082    1092 ..    1081    1093 .. 0.85
   4 ?    2.7   0.0     0.085   1.9e+02       2      28 ..    1106    1133 ..    1106    1135 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 3
                 HHHHHHT-SSHHH CS
        HEAT   4 lllkllsDpspeV 16 
                 ++ +l +Dps++V
  EPX70512.1 267 IIRNLFTDPSAFV 279
                 445555****998 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.015
                 HHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAakaLgala 28 
                 ll+  l Dps eV + A+kaL +++
  EPX70512.1 917 LLIFQLYDPSLEVCQIAVKALDDVC 941
                 5666689**************9988 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 1.7
                  HHHHHHHHHHH CS
        HEAT   19 aAakaLgalae 29  
                  +A++a+g++ +
  EPX70512.1 1082 SALWAIGNIGK 1092
                  89******976 PP

  == domain 4  score: 2.7 bits;  conditional E-value: 0.085
                  HHHHHHHH.T-SSHHHHHHHHHHHHHHH CS
        HEAT    2 lPlllkll.sDpspeVReaAakaLgala 28  
                  +Pl++k   +++ p VR +A+  Lg ++
  EPX70512.1 1106 VPLIVKFAeESSIPTVRGTAFFVLGLIS 1133
                  5899999889999************886 PP

>> FliD_N  Flagellar hook-associated protein 2 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   1.8    0.0011       2.5      21      52 ..      34      71 ..      28     154 .. 0.77

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0011
                XXXXXXXXXXXXXHHHHHHHHHHHHHHHHHH......H CS
      FliD_N 21 dkleqkktklewkqsayrelnsklsnlksal......s 52
                +k++q k+kl++k++ayr+ +  l+n+++ +       
  EPX70512.1 34 EKVDQLKEKLDNKRAAYRKTERLLNNFSTRFkhepieR 71
                578999***********************874433330 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1291 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       867  (0.0483574); expected 358.6 (0.02)
Passed bias filter:                      695  (0.038764); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.96u 0.34s 00:00:01.30 Elapsed: 00:00:00.50
# Mc/sec: 7740.62
//
Query:       EPX70513.1  [L=579]
Description: FAD binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-63  214.6   0.0    1.8e-63  214.1   0.0    1.2  1  FAD_binding_1  FAD binding domain
    9.1e-13   48.8   0.0    2.6e-11   44.1   0.0    2.3  1  NAD_binding_1  Oxidoreductase NAD-binding domain


Domain annotation for each model (and alignments):
>> FAD_binding_1  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  214.1   0.0     2e-67   1.8e-63       6     222 .]     143     368 ..     138     368 .. 0.98

  Alignments for each domain:
  == domain 1  score: 214.1 bits;  conditional E-value: 2e-67
                    TB-EEEEEEEEEE---.-SS--EEEEEEE-TTB....T----TT-EEEE-----HHHHHHHHHHHT--T...T-EEEEEESSTT......S--SSS CS
  FAD_binding_1   6 kkvflakvlknreLtkpesernvihveldisds....glkYetGdhlgvypsNneelVeellellgldpk.adevvelkaldee....saekeprl 92 
                     +vf+++v + reLtkp++ ++v+h+e+d+s +    g ++++G+++g +++N+++ V++ll+ll++ ++ ad+++ lk+ +++    +ae+ pr+
     EPX70513.1 143 FHVFPSPVINIRELTKPNAYKRVFHFEIDVSHYplpeGEEWMVGGSFGLMAPNDDAVVNHLLHLLQIPDDvADAPILLKTNGGRwptiWAEDVPRE 238
                    479****************************************************************99989***********9************ PP

                    SSEEHHHHHHHTB--SS.---HHHHHHHGGG-SSHHHHHHHHHHHH-HHHHHTTTTT--HHHHHHHHHTT---TTS-HHHHHHHS-B---EEEEB- CS
  FAD_binding_1  93 eptTlrqalkyylditg.ppskqlleaLaefaseeeekqkLekLssdegakeykelklneartllevleefpsvklplefLlevlpqLkpRyYSiS 187
                     ptT+r++lk+  d+++ pp+kql++ Lae+a++++ek+ L +L+s+ g++++++l++n++ tll++le+fps++lpl++Ll+vlpqL+pR+YS+S
     EPX70513.1 239 LPTTRRELLKWSSDFMSaPPKKQLIRLLAEYAQNPTEKKILLFLVSRLGQRAFCDLRVNNNVTLLTLLEAFPSIRLPLDHLLSVLPQLMPRWYSLS 334
                    *****************99***************************************************************************** PP

                    S-TTTTTTEEEEEEE--EE---SSS--EE-HHHHH CS
  FAD_binding_1 188 ssskvhpdevhltvvVveyetdgegrirkGvcsny 222
                    +++  h+  ++++v++ve+e+   g  ++G++s +
     EPX70513.1 335 NDPAQHNGVLEFAVALVEIEK-VGGGVHYGIGSGF 368
                    ********************8.**********986 PP

>> NAD_binding_1  Oxidoreductase NAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.1   0.0   2.9e-15   2.6e-11       1     107 [.     408     540 ..     408     542 .. 0.80

  Alignments for each domain:
  == domain 1  score: 44.1 bits;  conditional E-value: 2.9e-15
                    EEEEGGGGHHHHHHHHHHHHHCTTCSEEEEEEEESSGC.GSTTHHHHHHHHHHCTT.......EEEEEEE.............ESSCTTTSSSEES CS
  NAD_binding_1   1 miagGtGiaPvrsvlraileeakdktkvvlvyGnrtee.dllyreeleelakklpg.......rlkvvav.............vsreeagweggkg 75 
                    +i++G+GiaP+r++++++l++a+  +kv++++G+r +e d ly  e+e+ + + ++       + + ++v                  ++ + +k+
     EPX70513.1 408 LIGTGVGIAPFRGFVQRRLMNASCAGKVWIFHGCRDSElDELYHGEWENPSDNSRSnsprpqdKQNNTEVdtlefhndaregpHHMVVESRSRRKV 503
                    79*********************************************9987655544554655223333366788888877775555667778999 PP

                    SHHHHHHHHHHH....HSSTTEEEEEEC.SHHHHHHH CS
  NAD_binding_1  76 rvqdalleells....lkkeethvyvCG.ppgMikav 107
                    +vqd+l+ + +     l+ ++  +y+CG  +g+ ++v
     EPX70513.1 504 YVQDELRMKGDIvwnvLNHPNGKIYLCGgKQGLLRGV 540
                    999999776666889999**********777777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (579 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       477  (0.0266049); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.29s 00:00:00.85 Elapsed: 00:00:00.46
# Mc/sec: 3761.88
//
Query:       EPX70514.1  [L=396]
Description: NAD binding dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-70  235.3   0.0    2.2e-70  234.8   0.0    1.2  1  ox_reductase_C  Putative oxidoreductase C terminal domain
    6.2e-18   65.8   0.0    9.9e-18   65.1   0.0    1.3  1  GFO_IDH_MocA    Oxidoreductase family, NAD-binding Rossmann f
     0.0015   18.5   0.0      0.004   17.2   0.0    1.7  2  GFO_IDH_MocA_C  Oxidoreductase family, C-terminal alpha/beta 


Domain annotation for each model (and alignments):
>> ox_reductase_C  Putative oxidoreductase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  234.8   0.0   3.7e-74   2.2e-70       1     142 []     181     322 ..     181     322 .. 1.00

  Alignments for each domain:
  == domain 1  score: 234.8 bits;  conditional E-value: 3.7e-74
  ox_reductase_C   1 rylkvvqkmkkiikennlkvvatnaryvsayehaakkawweksisaGpvveqathfcdlsryfgGdvdldtvkaksvewyekaGklskipvdesk 95 
                     rylkvv+++kk+i++nnl++v+t+ary+s+y+h++k +ww+ s+s+Gpvveq+thfcdlsryfgGdvd++tvk+++v   ++ Gkls++p+de++
      EPX70514.1 181 RYLKVVEAAKKYIQDNNLNIVCTIARYNSSYIHNSKAFWWYVSKSGGPVVEQGTHFCDLSRYFGGDVDISTVKVNRVLSSDPVGKLSALPIDEEA 275
                     9********************************************************************************************** PP

  ox_reductase_C  96 ipederiprltsaswkyksGavGslehavalqGtkystelevladGy 142
                     ipe+er+pr+t+aswkyksGavG+l+h+++lqGt+y+t+le++adG+
      EPX70514.1 276 IPEQERVPRFTAASWKYKSGAVGILAHSIILQGTQYDTCLELQADGH 322
                     **********************************************7 PP

>> GFO_IDH_MocA  Oxidoreductase family, NAD-binding Rossmann fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.1   0.0   1.7e-21   9.9e-18       1     120 []      26     178 ..      26     178 .. 0.93

  Alignments for each domain:
  == domain 1  score: 65.1 bits;  conditional E-value: 1.7e-21
                   EEEEEETTSHH..HHHHHHHHHHTTTTE.......EEEEEECSSHHHHHHH....HHHTTHEEESS..........HHHHHTCT..TESEEEE-S-G CS
  GFO_IDH_MocA   1 lrvaiiGaGki..gskhlrplnesqrle.......evvalldpdaeraeav....aesfgveaysd..........leelladp..eidavivatpn 72 
                   ++vai+GaG i  gs+++ p+n++qr e       +v al++p +++  ++    ++s ++ ay++          l++l+++p  e++a ++++p+
    EPX70514.1  26 FKVAIVGAGGInfGSPEG-PWNNAQRIEqnlgqrlRVSALINPIPSETNRIldakRDSKVAYAYDEtrmftsmteyLDYLSRHPeeEPNAFVIGIPP 121
                   79****************.*****9999******************99999998666666668888999999************989********** PP

                   ......GGHHHHHHHHHHTT-..EEEEESSS-S.SHHHHHHHHHHHHHHTS-EEEE- CS
  GFO_IDH_MocA  73 ......gtheelakaaleagk..hvllEKPlat.tveeakelvelaekkgklvsvgy 120
                         + +++++++++++++  ++++EKP+++  ve+ +++v+ +e+++ ++s+gy
    EPX70514.1 122 dfhgsnKIGADMELQIVRQFPkaAIFIEKPISAaAVEDTFDVVRQLEQHQAIISIGY 178
                   88876555***********************999*******************9997 PP

>> GFO_IDH_MocA_C  Oxidoreductase family, C-terminal alpha/beta domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   6.7e-07     0.004       4      71 ..     193     257 ..     190     271 .. 0.74
   2 ?   -3.5   0.0       1.6   9.8e+03      25      47 ..     283     301 ..     278     302 .. 0.69

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 6.7e-07
                     HHTTTTSSEEEEEEEEECBEEECHHHHCCGGSHHCSTSHHHHTCHHHHHHHHHHHTSEEEEEEEEE.S CS
  GFO_IDH_MocA_C   4 IengklGevvsvdvwtldtragaeakkrwkrrkkksgGvlgdlgiHdiDllqwLfGqppsvvaalgrm 71 
                     I ++ l+ v ++   +   + ++++ ++w     ksgG +++ g+H+ Dl +++ G + +++++  r+
      EPX70514.1 193 IQDNNLNIVCTIA-RYNSSYIHNSKAFWWYV--SKSGGPVVEQGTHFCDLSRYFGGDVDISTVKVNRV 257
                     5566666666664.55555555666666654..59*************************99988765 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 1.6
                     ECHHHHCCGGSHHCSTSHHHHTC CS
  GFO_IDH_MocA_C  25 gaeakkrwkrrkkksgGvlgdlg 47 
                     ++++  +wk     ++G++g+l+
      EPX70514.1 283 PRFTAASWK----YKSGAVGILA 301
                     567778888....5788888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (396 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       455  (0.0253779); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.29s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 2655.14
//
Query:       EPX70515.1  [L=649]
Description: diacylglycerol binding protein Bzz1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.3e-21   76.7   2.0    1.3e-21   76.7   2.0    2.7  3  FCH              Fes/CIP4, and EFC/F-BAR homology domain
    5.9e-21   74.1   0.1    3.6e-11   42.8   0.0    2.6  2  SH3_9            Variant SH3 domain
    4.7e-17   61.3   0.0    3.6e-09   36.1   0.0    2.4  2  SH3_1            SH3 domain
    1.2e-15   56.9   0.0    4.3e-10   39.1   0.0    2.5  2  SH3_2            Variant SH3 domain
    2.6e-09   36.8   7.9    7.5e-09   35.4   7.9    1.8  1  C1_1             Phorbol esters/diacylglycerol binding domain
  ------ inclusion threshold ------
       0.22   11.4   4.5        2.5    8.1   0.4    3.1  3  DUF3198          Protein of unknown function (DUF3198)
       0.34   10.6   3.3       0.22   11.2   0.4    2.3  2  Nbl1_Borealin_N  Nbl1 / Borealin N terminal
       0.51   10.7   6.6        1.1    9.6   6.6    1.5  1  C1_2             C1 domain
       0.81    9.7   4.0         16    5.5   0.5    2.7  3  Baculo_PEP_C     Baculovirus polyhedron envelope protein, PEP
        8.1    6.7   8.1        2.6    8.3   3.7    2.4  2  MRP-S23          Mitochondrial ribosomal protein S23


Domain annotation for each model (and alignments):
>> FCH  Fes/CIP4, and EFC/F-BAR homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.7   2.0   7.1e-25   1.3e-21       2      77 .]      16     106 ..      15     106 .. 0.95
   2 ?   -2.0   0.2       2.6   4.7e+03      39      70 ..     135     164 ..     120     173 .. 0.51
   3 ?   -1.5   0.1       1.8   3.3e+03      36      63 ..     331     356 ..     329     367 .. 0.61

  Alignments for each domain:
  == domain 1  score: 76.7 bits;  conditional E-value: 7.1e-25
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT----TT.-...................HHHHHHHHHHHHHHHHHHHHHHH CS
         FCH   2 fkvlqkrleqgialledlqeflkeRaeiEkeYakkLqkLakkylkrr.kkks..............eestlvtawtvlleeteklaqshla 77 
                 fk +++++++g +++ed+q+++keR++iE+eY++kL+ L++k+ +++ kk s               e++++t+w+++l+e+e+ ++ h++
  EPX70515.1  16 FKIVDSWVHNGSKWIEDIQQYYKERSSIEREYSQKLSSLSRKFVEKKnKKSSllsvgenptksagsLECASLTTWSKILDELEQSSKIHQK 106
                 899******************************************8855555*************************************85 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 2.6
                 HHCT----TT-.....HHHHHHHHHHHHHHHH CS
         FCH  39 kLakkylkrrkkkseestlvtawtvlleetek 70 
                  L +k+l++  k+s    +++a +++ e +e+
  EPX70515.1 135 HLYEKFLEQ--KESLLTMVKRAKSSYHEACES 164
                 445555552..222223333444444444444 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 1.8
                 HHHHHCT----TT.-.....HHHHHHHHH CS
         FCH  36 kLqkLakkylkrr.kkkseestlvtawtv 63 
                  Lq L+k+ +++r        +l +++++
  EPX70515.1 331 ELQSLSKQLEGSRiDD---TTALEQSYES 356
                 5899999998876443...3444444444 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.8   0.0   4.4e-10   7.9e-07       2      49 .]     527     575 ..     527     575 .. 0.94
   2 !   42.8   0.0     2e-14   3.6e-11       1      49 []     598     647 ..     598     647 .. 0.94

  Alignments for each domain:
  == domain 1  score: 28.8 bits;  conditional E-value: 4.4e-10
       SH3_9   2 lypyepreddeLsLqrGDvitvieese.dgWlegsltGrtGlvPanyve 49 
                 ly+++ +++  Ls ++G+++t++e ++ +gW+ ++ +G  Gl+P++yve
  EPX70515.1 527 LYDFTGTQEGVLSASQGQTFTLLEPDNgSGWISARIGGLDGLLPSTYVE 575
                 7**********************77655********************7 PP

  == domain 2  score: 42.8 bits;  conditional E-value: 2e-14
       SH3_9   1 AlypyepreddeLsLqrGDvitvi.eesedgWlegsltGrtGlvPanyve 49 
                 A ++ye++++ e+ +++GDvi+v  +++ +gW eg+l+G tG +Panyve
  EPX70515.1 598 AAFDYEAQSELEITIREGDVIRVTqRDAGNGWSEGTLHGITGQFPANYVE 647
                 679*********************66689********************7 PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.0   2.7e-08   4.8e-05       3      48 .]     527     571 ..     527     571 .. 0.94
   2 !   36.1   0.0     2e-12   3.6e-09       1      48 []     597     643 ..     597     643 .. 0.97

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 2.7e-08
                 SSSBEXSSTTBXEBSTTEEEEEEEECSS.SEEEEEETTSTEEEEEEG CS
       SH3_1   3 lYDYeaeesdELsfkkGDviivleksed.gWwkgrlkgtgkeGliPs 48 
                 lYD+++++++ Ls  +G ++++le +++ gW  +r  g    Gl Ps
  EPX70515.1 527 LYDFTGTQEGVLSASQGQTFTLLEPDNGsGWISARIGG--LDGLLPS 571
                 8***********************9999*******994..6899987 PP

  == domain 2  score: 36.1 bits;  conditional E-value: 2e-12
                 EESSSBEXSSTTBXEBSTTEEEEEEEECSS.SEEEEEETTSTEEEEEEG CS
       SH3_1   1 iAlYDYeaeesdELsfkkGDviivleksed.gWwkgrlkgtgkeGliPs 48 
                 +A +DYea+++ E+++++GDvi v +++ + gW +g l+  g +G +P+
  EPX70515.1 597 KAAFDYEAQSELEITIREGDVIRVTQRDAGnGWSEGTLH--GITGQFPA 643
                 699************************************..69*****6 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   6.5e-06     0.012       7      55 ..     529     575 ..     525     577 .. 0.83
   2 !   39.1   0.0   2.4e-13   4.3e-10       1      55 [.     595     647 ..     595     649 .] 0.93

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 6.5e-06
                 -B-SCGCCB--B-TTEEEEEE..EEEECT.TEEEEEECCCEEEEEGCGEE CS
       SH3_2   7 dyvgedkseLsfkkGdvikvlslgskdsd.gwwegevgGrvGlfPsslve 55 
                 d++g+ ++ Ls  +G+++ +l   + d++ gw+ ++ gG +Gl Ps++ve
  EPX70515.1 529 DFTGTQEGVLSASQGQTFTLL---EPDNGsGWISARIGGLDGLLPSTYVE 575
                 788999999************...6666655555566************8 PP

  == domain 2  score: 39.1 bits;  conditional E-value: 2.4e-13
                 EEEESS-B-SCGCCB--B-TTEEEEEE..EEEECT.TEEEEEECCCEEEEEGCGEE CS
       SH3_2   1 yvraiedyvgedkseLsfkkGdvikvlslgskdsd.gwwegevgGrvGlfPsslve 55 
                 yv+a +dy+++++ e+++++Gdvi+v+    +d + gw eg+ +G  G fP ++ve
  EPX70515.1 595 YVKAAFDYEAQSELEITIREGDVIRVT---QRDAGnGWSEGTLHGITGQFPANYVE 647
                 89*************************...66666599*****************8 PP

>> C1_1  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.4   7.9   4.2e-12   7.5e-09       1      52 [.     398     446 ..     398     447 .. 0.97

  Alignments for each domain:
  == domain 1  score: 35.4 bits;  conditional E-value: 4.2e-12
                 --EEEE--SS--B-TTT-SB--SSSS-EEEETTT--EE-CCCCTTS-SBTTC CS
        C1_1   1 HhwvhrnfkqptfCkhCgeflwgkekqglkCswCkllvHkkChekvpkecgc 52 
                 H +++ +fk p +C++C + +   + +gl+C++C++++H +C   vp +cg+
  EPX70515.1 398 HTFKVASFKIPVKCSYCHSKV---WGRGLSCEDCGYKCHPRCQLYVPANCGQ 446
                 9********************...889***********************96 PP

>> DUF3198  Protein of unknown function (DUF3198)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.2     0.038        68      23      44 ..     124     145 ..     121     149 .. 0.88
   2 ?    8.1   0.4    0.0014       2.5       4      34 ..     311     341 ..     309     343 .. 0.92
   3 ?   -4.0   0.0       7.8   1.4e+04      13      21 ..     364     372 ..     361     373 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.038
                 HHHHHHHHHH-SHHHHHHHHHH CS
     DUF3198  23 keLekiarklGssYqqrLeeak 44 
                 ++ e++ + ++  Y++ Le++ 
  EPX70515.1 124 TNVENLTKSYDHLYEKFLEQKE 145
                 567999**************96 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.0014
                 HHHHHHHHS--HHHHHHHHHHHHHHHHHH-S CS
     DUF3198   4 rkFeelInSdSKstFvknlkeLekiarklGs 34 
                 r+F +++  +SKs+  k + eL+ ++++l +
  EPX70515.1 311 RNFLRNTLVNSKSEIQKAEEELQSLSKQLEG 341
                 899************************9976 PP

  == domain 3  score: -4.0 bits;  conditional E-value: 7.8
                 --HHHHHHH CS
     DUF3198  13 dSKstFvkn 21 
                 +SK++ +kn
  EPX70515.1 364 ESKEVLIKN 372
                 89*999998 PP

>> Nbl1_Borealin_N  Nbl1 / Borealin N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.4   0.00013      0.22       7      36 ..     109     138 ..     105     143 .. 0.89
   2 ?   -3.8   0.2       5.7     1e+04      18      31 ..     326     339 ..     323     340 .. 0.63

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00013
  Nbl1_Borealin_N   7 enfdlEveeRirrlraelelllktlrnrfe 36 
                      ++f lE +e+++rl++++e+l k+ +  +e
       EPX70515.1 109 DDFVLETNEQAKRLETNVENLTKSYDHLYE 138
                      79*********************9887776 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 5.7
  Nbl1_Borealin_N  18 rrlraelelllktl 31 
                      ++ ++el++l k+l
       EPX70515.1 326 QKAEEELQSLSKQL 339
                      55667777776665 PP

>> C1_2  C1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   6.6   0.00061       1.1      16      46 ..     406     436 ..     395     437 .. 0.87

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00061
        C1_2  16 sesfnCsaCgrkidgffYsCseCdfslhvrC 46 
                 ++  +Cs C  k+ g   sC+ C ++ h rC
  EPX70515.1 406 KIPVKCSYCHSKVWGRGLSCEDCGYKCHPRC 436
                 56789*******98999***99********* PP

>> Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.1     0.021        37      48      93 ..     105     150 ..      84     167 .. 0.68
   2 ?   -2.6   0.0       2.9   5.1e+03     106     125 ..     215     234 ..     212     242 .. 0.61
   3 ?    5.5   0.5    0.0089        16      38     109 ..     316     396 ..     309     406 .. 0.79

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.021
  Baculo_PEP_C  48 nalsedlksllaeldtrldtlltnLtdalnalqdtlrneLtnlnsi 93 
                   ++l++d+    +e+++rl+t+++nLt++  +l +++ ++ ++l + 
    EPX70515.1 105 QKLADDFVLETNEQAKRLETNVENLTKSYDHLYEKFLEQKESLLTM 150
                   3455566666678888999999999999999988777666655554 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 2.9
  Baculo_PEP_C 106 stLnnllqalnnldlgalsq 125
                   +tL nll  ++ l++  +++
    EPX70515.1 215 ETLPNLLDHMQRLNEYRVKN 234
                   57777777766666555544 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.0089
  Baculo_PEP_C  38 tlldaietqLnalsedlksllaeldt....rldtlltnLtdalnalq.....dtlrneLtnlnsiltnLlssvtNinstLn 109
                   ++l + ++++++ +e+l+sl+++l+     + ++l +  +++++a++       ++n+   ln  +  ++ + +Ni++ +n
    EPX70515.1 316 NTLVNSKSEIQKAEEELQSLSKQLEGsridDTTALEQSYESKIAAVEleskeVLIKNRVHDLNVRVGKITEKAGNIEEGMN 396
                   55566677788888899999888887655555555667778888888888755689********************99887 PP

>> MRP-S23  Mitochondrial ribosomal protein S23
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.3      0.91   1.6e+03      89     103 ..      50      64 ..      30     120 .. 0.54
   2 ?    8.3   3.7    0.0015       2.6      48     126 ..     116     194 ..     109     196 .. 0.92

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.91
     MRP-S23  89 kkkstcqrfvekyqe 103
                 k +s + +fvek ++
  EPX70515.1  50 KLSSLSRKFVEKKNK 64 
                 444555555555433 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.0015
     MRP-S23  48 erpapkledkvreilYeeDevrakfykqygkgseavdllkekkkstcqrfvekyqelkkkeeldeeelfeeaekalkee 126
                 +++a++le++v+++  + D + +kf +q+++  ++v+ +k++++ +c+ + +  q+  k+++ +  +lf++++ +++++
  EPX70515.1 116 NEQAKRLETNVENLTKSYDHLYEKFLEQKESLLTMVKRAKSSYHEACESLESARQKRDKHNDEKTGKLFRNSQSDMLDK 194
                 567778899*****************************************999999999*************9999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (649 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2078  (0.115902); expected 358.6 (0.02)
Passed bias filter:                      680  (0.0379274); expected 358.6 (0.02)
Passed Vit filter:                        78  (0.00435049); expected 17.9 (0.001)
Passed Fwd filter:                        26  (0.00145016); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.82u 0.30s 00:00:01.11 Elapsed: 00:00:00.49
# Mc/sec: 4018.42
//
Query:       EPX70516.1  [L=507]
Description: ATP-dependent RNA helicase Dbp5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      5e-37  127.4   0.3    8.7e-37  126.6   0.3    1.4  1  DEAD           DEAD/DEAH box helicase
    2.8e-27   95.3   0.0    7.6e-27   93.9   0.0    1.8  1  Helicase_C     Helicase conserved C-terminal domain
     0.0022   17.8   0.1     0.0045   16.7   0.1    1.5  1  AAA_30         AAA domain
  ------ inclusion threshold ------
       0.15   11.7   0.0       0.37   10.4   0.0    1.6  1  Abhydrolase_8  Alpha/beta hydrolase
       0.23   11.7   1.5       0.75   10.0   1.5    1.8  1  SPT16          FACT complex subunit (SPT16/CDC68)


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.6   0.3   2.4e-40   8.7e-37       2     173 ..     143     304 ..     142     307 .. 0.90

  Alignments for each domain:
  == domain 1  score: 126.6 bits;  conditional E-value: 2.4e-40
                 HHHHHHHHHHH..TTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTC CS
                 xxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   2 diQaeaiplil..gggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngv 98 
                 +iQ++a+pl+l    ++++++ + G+GKT+af++ +l++v   ++  +p+a++++P+reLa+q+++ +++++ky+++++   i++  a  + ++l  ++
  EPX70516.1 143 KIQEKALPLLLadPPRNMIGQSQSGTGKTAAFALTMLSRVD--TTVAKPQAICLAPSRELARQIMDVVEEMGKYTGVQTAFAIKD--AVPKGQVL--NA 235
                 79*********55559************************4..699******************************999977774..44567777..89 PP

                 SEEEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHT.TTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  99 divvgtpgrlddllstgklnlsqvrflVlDEadrlldq.gfsdfinrilnqlpqitcdgklqrqvivlSATlpkdv 173
                 +iv+gtpg ++dl ++++l+l+++r +VlDEad++ldq g  d+  r+ + l       +++ qv+++SAT++++v
  EPX70516.1 236 QIVIGTPGTVMDLAKRRQLDLKHIRAFVLDEADNMLDQqGLADQSMRVKRLL-------PKNTQVVLFSATFSEQV 304
                 **************************************89999999977777.......56778********9776 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.9   0.0   2.1e-30   7.6e-27       6     111 .]     347     457 ..     342     457 .. 0.87

  Alignments for each domain:
  == domain 1  score: 93.9 bits;  conditional E-value: 2.1e-30
                 HHHHHHHTTTTSEEEEEESSHHHHHH..HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSS......SS CS
  Helicase_C   6 llellkleeeggkilifvntidrlek..vklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlp......rn 96 
                 l+el+      g+++if++++d++e+   +++  + g +v +l+g+l   +r++i+++f++g+s+vLi+t+v++rGid+ +vn+V+n+d+p       +
  EPX70516.1 347 LVELY-GLLTIGQSIIFCRKKDTAEEiaRRMV--QDGHTVSCLTGNLDGTQRDHIMDSFRAGTSKVLITTNVIARGIDVLQVNMVVNYDMPldsagkPD 442
                 55554.445789************87644444..77*******************************************************88777777 PP

                 HHHHHHHHTTSSSTT CS
  Helicase_C  97 vtsyiqriGRtgRag 111
                 +++y +riGRtgR+g
  EPX70516.1 443 PQTYLHRIGRTGRFG 457
                 9************86 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.1   1.3e-06    0.0045       5     106 ..     144     277 ..     141     297 .. 0.69

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 1.3e-06
      AAA_30   5 eQaaavealltsgdrvavltGpAGtGKtta..lkalreaweaa.ggrviglAptgkaAkvLa...eelg....i.eastiakllkrlk........... 81 
                  Q++a+  ll+++ r ++ +   GtGKt a  l+ l ++ ++  + + i lAp+ + A+++    ee+g    + +a  i+                  
  EPX70516.1 144 IQEKALPLLLADPPRNMIGQSQSGTGKTAAfaLTMLSRVDTTVaKPQAICLAPSRELARQIMdvvEEMGkytgVqTAFAIKDA----Vpkgqvlnaqiv 238
                 59999***********************751166778998888789**************77344344421112233334444....144458888888 PP

      AAA_30  82 .............grarlepgtllivDEag.mvdtkqla 106
                              ++ +l++ + ++ DEa  m+d++ la
  EPX70516.1 239 igtpgtvmdlakrRQLDLKHIRAFVLDEADnMLDQQGLA 277
                 888888888886644555666889999985266666655 PP

>> Abhydrolase_8  Alpha/beta hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0    0.0001      0.37     118     171 ..     214     272 ..     206     277 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.0001
  Abhydrolase_8 118 YGSlvaslAldd...aaseVsdvvlyGSPGl..eaesaakLgledarvfvmrgadDlie 171
                    Y  + ++ A++d    ++  +  +++G PG+  ++ +  +L+l++ r+fv  +ad ++ 
     EPX70516.1 214 YTGVQTAFAIKDavpKGQVLNAQIVIGTPGTvmDLAKRRQLDLKHIRAFVLDEADNMLD 272
                    77788999999977656667777999****7225667789************9998765 PP

>> SPT16  FACT complex subunit (SPT16/CDC68)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   1.5   0.00021      0.75      92     132 ..      71     111 ..      63     121 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00021
       SPT16  92 kkvkkreaekkekedlveqekLilskskrkprLkdlyirpn 132
                 k+  ++++e++ek +  e+ +Li++k++ +++L dl   pn
  EPX70516.1  71 KENATKNEEENEKVKAEEESNLIQNKNEVRVKLADLQADPN 111
                 6667888889999999********************99997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (507 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1667  (0.0929779); expected 358.6 (0.02)
Passed bias filter:                      813  (0.0453455); expected 358.6 (0.02)
Passed Vit filter:                        67  (0.00373696); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.69u 0.31s 00:00:01.00 Elapsed: 00:00:00.48
# Mc/sec: 3156.95
//
Query:       EPX70517.1  [L=298]
Description: spermidine synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-73  246.6   0.0    1.7e-73  246.1   0.0    1.2  1  Spermine_synth   Spermine/spermidine synthase domain
    7.8e-26   89.7   0.0    1.4e-25   88.9   0.0    1.4  1  Spermine_synt_N  Spermidine synthase tetramerisation domain
      9e-06   26.3   0.0    1.9e-05   25.3   0.0    1.6  1  Methyltransf_25  Methyltransferase domain
     0.0008   20.1   0.1     0.0021   18.8   0.0    1.7  2  Methyltransf_12  Methyltransferase domain
     0.0011   18.9   0.0     0.0018   18.2   0.0    1.2  1  Methyltransf_18  Methyltransferase domain
  ------ inclusion threshold ------
      0.038   13.2   0.0      0.061   12.5   0.0    1.2  1  DUF43            Branched-chain polyamine synthase A C-termin
       0.04   15.0   0.0      0.091   13.8   0.0    1.6  1  Methyltransf_24  Methyltransferase domain
      0.066   12.5   0.1       0.42    9.9   0.0    2.1  2  Methyltransf_2   O-methyltransferase domain


Domain annotation for each model (and alignments):
>> Spermine_synth  Spermine/spermidine synthase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  246.1   0.0   7.5e-77   1.7e-73       1     186 [.      71     254 ..      71     256 .. 0.98

  Alignments for each domain:
  == domain 1  score: 246.1 bits;  conditional E-value: 7.5e-77
                     THHHHHHHHHHHHCCSSST-EEEEESSTTSHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHSHHHHTTCGGCTTEEEEESTCHHHHCTCSS-EEE CS
  Spermine_synth   1 efaykemiahvplmlhknpkevLiiGGgDGgvlrevvkhntvekitlvdiDqkvidfskkflpslaisafndarvklvlgdgfkflkayekkfdv 95 
                     ef+y+emiah++l++h++pk+vL+iGGgDGgvlrevvkh+++e+++l+diD++v+++s++ lp++a++ +n+++vk+++gdgf+flk+y+++fdv
      EPX70517.1  71 EFSYQEMIAHLALNSHPSPKKVLVIGGGDGGVLREVVKHDCIEEAVLCDIDEDVLKVSREHLPEMAEG-LNHPKVKVHIGDGFQFLKDYKNTFDV 164
                     799*****************************************************************.************************** PP

                     EEEECCSTTCSSCGCSSHHHHHHHHHTEEEEEEEEEEEEETTTCHHHHHHHHHHHHTTSSCEEEEEEEETTTSCSCEEEEEEEESSTT..T CS
  Spermine_synth  96 vivdsldpvgpaenlFskeffdllkkvlkedGviilqaekpelekelvinvdksgkqvfalqvepsavlvPtylsgminfvveskknlvtl 186
                     +i+ds+dp gpae+lF+k++f+ll ++l+++Gvi++qae+++l++ ++ +v+k++k++f+ +v+++++++Pty+sg+i+fvv+sk++ ++l
      EPX70517.1 165 IITDSSDPDGPAEALFQKPYFELLSDALRDGGVITTQAECIWLHLGVIGDVLKAVKSAFP-NVRYAYTTIPTYPSGQIGFVVASKNPVIDL 254
                     ************************************************************.*************************87776 PP

>> Spermine_synt_N  Spermidine synthase tetramerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.9   0.0   6.1e-29   1.4e-25       1      53 []      14      68 ..      14      68 .. 0.99

  Alignments for each domain:
  == domain 1  score: 88.9 bits;  conditional E-value: 6.1e-29
                     EEEEEEEE..TTEEEEEEEEEEEEEEEESSSEEEEEEETTTEEEEEETTEEEEET CS
  Spermine_synt_N  1 gWfteisd..pglalelkVekvLyeekSeyQdieifesktfGkvLvLDgvvqltE 53
                     gWf+ei+   pg+a++l+V+kvLy +kS+yQd+++fes+t+G+vLvLDg++q+tE
       EPX70517.1 14 GWFREINHmwPGQAMTLQVKKVLYAGKSKYQDVLVFESETYGRVLVLDGAIQCTE 68
                     7*****************************************************9 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3   0.0   8.3e-09   1.9e-05       1      70 [.      92     167 ..      92     196 .. 0.81

  Alignments for each domain:
  == domain 1  score: 25.3 bits;  conditional E-value: 8.3e-09
                      EEEET-TTSHHHHHHHCTST.SSEEEEEESSHHHHHHHHHHHHH.....TTTTEEEEESBCCG.BSSSTTTEEEEEE CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlg.kakvtgvDiseemleaareraee.....eglnvefvqgdaed.lpfedgsfDlvvs 70 
                      vL +G G G +++++ k+    ++ + +Di+e+ l+  re++ e     ++++v+++ gd  + l+  +++fD+++ 
       EPX70517.1  92 VLVIGGGDGGVLREVVKH-DcIEEAVLCDIDEDVLKVSREHLPEmaeglNHPKVKVHIGDGFQfLKDYKNTFDVIIT 167
                      899*************99.4489*******************9988554444*********664899999*****98 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   9.4e-07    0.0021       1      71 [.      93     166 ..      93     170 .. 0.81
   2 ?   -3.5   0.0         8   1.8e+04       8      26 ..     213     231 ..     212     233 .. 0.78

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 9.4e-07
  Methyltransf_12   1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakr.ennnnnnvelealdlldldgg...ssfDlvv 71 
                      L iG+G+G +lr++ ++    e + +Di++++++  +e+l +  e++n+ +v++   d + ++ +   ++fD+++
       EPX70517.1  93 LVIGGGDGGVLREVVKHDCIEEAVLCDIDEDVLKVSREHLPEMaEGLNHPKVKVHIGDGF-QFLKdykNTFDVII 166
                      569**************999999**********999999988615566666777766654.4444699*****98 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 8
  Methyltransf_12   8 Gsllralleklpdieytgv 26 
                      G++l+a+  ++p+++y ++
       EPX70517.1 213 GDVLKAVKSAFPNVRYAYT 231
                      7888889999999888776 PP

>> Methyltransf_18  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   8.2e-07    0.0018      16      87 ..      90     166 ..      80     167 .. 0.81

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 8.2e-07
  Methyltransf_18  16 srvaDiGtDHgylpiylvkegkakkviasDinegplekakeniek..agl.edkievrlsdGleklkeee..vdtvv 87 
                      ++v+ iG   g +  ++vk++ +++++ +Di e  l+ ++e++ +  +gl + k++v+++dG++ lk+ +  +d+++
       EPX70517.1  90 KKVLVIGGGDGGVLREVVKHDCIEEAVLCDIDEDVLKVSREHLPEmaEGLnHPKVKVHIGDGFQFLKDYKntFDVII 166
                      5677788888888899***************************88555664569************95543355554 PP

>> DUF43  Branched-chain polyamine synthase A C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   2.7e-05     0.061      46     120 ..      90     169 ..      83     179 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 2.7e-05
                 -EEEEES-TT-HHHHHHH.HT--SEEEEE-S-HHHHHHHHH....HHHHHT--.EEEE---TTS---TTTSS-BSEEEE-- CS
       DUF43  46 keilvlGdDDLtslalaL.tglpkkvvvvDiDeRlikfier....vakelglk.ieaivyDlrkplpeelkekFdvfitDP 120
                 k++lv+G  D   l   +  +  ++ v+ DiDe ++k+  +    +a+ l+ + +++++ D  + + +++k+ Fdv+itD 
  EPX70517.1  90 KKVLVIGGGDGGVLREVVkHDCIEEAVLCDIDEDVLKVSREhlpeMAEGLNHPkVKVHIGDGFQ-FLKDYKNTFDVIITDS 169
                 78999998887777665515677999999*******9976511115555555568888888766.55789*********96 PP

>> Methyltransf_24  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   4.1e-05     0.091      25     101 ..     114     198 ..      91     200 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 4.1e-05
  Methyltransf_24  25 rlvavdhdpgaeeaaalare......agldd.rvrlikadseealaslaagsiDllfiDg.....ghaaeavledleallprlapggvv 101
                      + v +d d+   ++ ++ re      +gl++  v+++ +d ++ l++ +  ++D+++ D      +++a   ++++e+l + l++ggv+
       EPX70517.1 114 EAVLCDIDE---DVLKVSREhlpemaEGLNHpKVKVHIGDGFQFLKDYK-NTFDVIITDSsdpdgPAEALFQKPYFELLSDALRDGGVI 198
                      556667777...666666665555665666536****************.99******97321113333468999************98 PP

>> Methyltransf_2  O-methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0   0.00019      0.42      65     121 ..      91     152 ..      58     198 .. 0.84
   2 ?    0.3   0.0      0.16   3.7e+02      71      94 ..     210     233 ..     209     239 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00019
                     EEEEET-TTSHHHHHHHHH-TT-EEEEEE-H.HHHHHHHHHS.----...-TTEEEEES-TT CS
  Methyltransf_2  65 slvDvGGGtGalakaivsayPtikvivfDlp.eVveaAkehl.sage...eervefvgGdff 121
                     +++ +GGG G +++++v++    ++++ D+  +V +  +ehl +++e   +++v+++ Gd f
      EPX70517.1  91 KVLVIGGGDGGVLREVVKHDCIEEAVLCDIDeDVLKVSREHLpEMAEglnHPKVKVHIGDGF 152
                     55669*************************7359999999*975543223799999999988 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.16
                     -TTSHHHHHHHHH-TT-EEEEEE- CS
  Methyltransf_2  71 GGtGalakaivsayPtikvivfDl 94 
                     G +G ++ka+ sa+P+++     +
      EPX70517.1 210 GVIGDVLKAVKSAFPNVRYAYTTI 233
                     558999**********99876555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (298 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       394  (0.0219756); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 2052.05
//
Query:       EPX70518.1  [L=383]
Description: inner membrane translocase Oxa101 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.1e-30  104.9   3.0    5.9e-30  104.4   3.0    1.2  1  60KD_IMP  60Kd inner membrane protein


Domain annotation for each model (and alignments):
>> 60KD_IMP  60Kd inner membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.4   3.0   3.3e-34   5.9e-30       1     166 []      92     288 ..      92     288 .. 0.83

  Alignments for each domain:
  == domain 1  score: 104.4 bits;  conditional E-value: 3.3e-34
    60KD_IMP   1 yglaIilltiivrlillpltlkqlkssakmqelqPelke....iqe.kykkdkqklqqemm...klYkkegvnplaGclplLiqlpifialyrvlrsla 91 
                 ++++Ii  t+ vr++llpl+lk++++s k+  lqPe+k+    i++ k ++d+++l+q+ m   +lY k++v+pl+ ++  L q ++f+++++++r++a
  EPX70518.1  92 WWVSIIATTVGVRFALLPLMLKSFRTSSKLTVLQPEMKKeldaIKSaKLENDQMRLSQHSMalrALYIKHEVSPLSIFMLPLTQSVVFFSFFYAIRQMA 190
                 899*********************************985333255336668898888877622268*******************************99 PP

    60KD_IMP  92 .....sf......wikdLsapd....lpillavttflqqklsksk.........kmqkmmlyvmplmilffslsfpaglvlYwlvsnllsiaqqliink 166
                       f      w++dLsapd    lp++ a+++f  ++l++s+         ++ +++ ++  l+  +f+l++pa++ lYw+ s++++i+q +i+++
  EPX70518.1 191 rvpveGFkeggiaWFQDLSAPDpyfiLPVINAAFMFTGMQLNRSNtastignspNW-STFFFLCCLLSPLFTLKLPAAIFLYWIPSSIFNIVQGFILKR 288
                 7766622566667***********************99999955334556655433.4555788899999************************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (383 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       683  (0.0380947); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.29s 00:00:00.80 Elapsed: 00:00:00.47
# Mc/sec: 2453.86
//
Query:       EPX70519.1  [L=594]
Description: actin cortical patch component Aip1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.5e-29  101.6  19.6    3.3e-07   30.9   0.1   10.7 11  WD40         WD domain, G-beta repeat
    8.8e-21   74.0   1.7    3.9e-06   27.1   0.0    5.9  6  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
      4e-07   30.1   0.5        0.1   12.5   0.0    3.9  4  eIF2A        Eukaryotic translation initiation factor eIF2A
    7.5e-05   21.8   0.5         16    4.3   0.0    5.3  6  Ge1_WD40     WD40 region of Ge1, enhancer of mRNA-decapping p
     0.0067   16.0   0.2       0.76    9.3   0.0    3.1  3  HPS3_N       Hermansky-Pudlak syndrome 3
  ------ inclusion threshold ------
       0.01   15.7   0.2        5.9    6.9   0.1    3.6  4  PD40         WD40-like Beta Propeller Repeat
      0.013   16.1   0.7        3.5    8.2   0.0    3.3  3  WAK          Wall-associated kinase
      0.013   14.9   0.1      0.077   12.3   0.1    2.3  3  CPSF_A       CPSF A subunit region
      0.067   11.2   0.4        7.3    4.4   0.0    2.6  3  IKI3         IKI3 family
      0.072   13.1   0.3        2.5    8.2   0.0    3.2  3  PQQ          PQQ enzyme repeat
       0.12   11.7   0.3         23    4.2   0.0    3.0  3  WD40_like    WD40-like domain
       0.13   12.3   0.1        2.9    7.9   0.0    3.3  3  WD40_3       WD domain, G-beta repeat
       0.68   10.5   5.2         16    6.2   0.1    4.5  4  PQQ_3        PQQ-like domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   1.1e-05     0.015       7      38 .]      54      86 ..      49      86 .. 0.87
   2 ?    1.7   0.0       0.4   5.5e+02      12      28 ..     103     120 ..      92     129 .. 0.76
   3 ?    4.7   0.0     0.046        64       5      36 ..     140     173 ..     136     175 .. 0.71
   4 !    7.7   0.0     0.005       6.9       6      36 ..     184     215 ..     180     217 .. 0.86
   5 !   30.9   0.1   2.4e-10   3.3e-07       2      38 .]     222     259 ..     221     259 .. 0.90
   6 !   10.7   0.0   0.00056      0.77       7      38 .]     310     342 ..     305     342 .. 0.87
   7 ?   -1.6   0.1       4.5   6.3e+03      16      35 ..     366     380 ..     348     380 .. 0.56
   8 ?    1.9   0.0      0.35   4.9e+02      14      36 ..     438     460 ..     423     462 .. 0.85
   9 !   18.3   0.0   2.3e-06    0.0032       6      38 .]     473     506 ..     469     506 .. 0.90
  10 !    9.8   0.4    0.0011       1.5      10      37 ..     520     548 ..     511     549 .. 0.88
  11 ?    2.4   0.0      0.25   3.4e+02      14      37 ..     568     590 ..     555     591 .. 0.78

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.1e-05
                EESSSSEEEEE.EETTSSEEEEEETTSEEEEEE CS
        WD40  7 ltGHssvtsla.fspdgawlasGsdDgtvriWd 38
                +  H+  ts+a fsp+g ++asG+  g+vr+Wd
  EPX70519.1 54 YNEHTAPTSVAkFSPSGFYVASGDVHGNVRVWD 86
                567856699999********************9 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.4
                 S.EEEEEEETTSSEEEEE CS
        WD40  12 s.vtslafspdgawlasG 28 
                 + +++++++ d++ +++ 
  EPX70519.1 103 GrINDIDWDGDSQRIIAV 120
                 249*********998754 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.046
                 EEEESSSS.EEEEEEETTSSE.EEEEETTSEEEE CS
        WD40   5 rtltGHss.vtslafspdgaw.lasGsdDgtvri 36 
                 +++ GHs  v+s+a  +  ++  a++sdD +v +
  EPX70519.1 140 GEIFGHSAiVNSVAMRKQRPLrAATASDDSSVNF 173
                 55559*6657***766666666678999999976 PP

  == domain 4  score: 7.7 bits;  conditional E-value: 0.005
                 EEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS
        WD40   6 tltGH.ssvtslafspdgawlasGsdDgtvri 36 
                 +++ H + v+++++ p+   +as + Dg+v +
  EPX70519.1 184 SIRCHdKYVYDVRYAPNDEKFASVGADGKVFL 215
                 6789*888*************98788**9965 PP

  == domain 5  score: 30.9 bits;  conditional E-value: 2.4e-10
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +++ ++ +H + + sl++spd++ l+++s D++v++W+
  EPX70519.1 222 EKILEFNAHkGTIFSLSWSPDSKKLVTSSADRSVKVWN 259
                 6678899**555*************************8 PP

  == domain 6  score: 10.7 bits;  conditional E-value: 0.00056
                 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                   GH  s+ts   +pd++ l ++s+Dg   +Wd
  EPX70519.1 310 VYGHqRSITSSFLCPDSKSLYTASYDGVALVWD 342
                 4599777988889*******************9 PP

  == domain 7  score: -1.6 bits;  conditional E-value: 4.5
                 EEEETTSSEEEEEETTSEEE CS
        WD40  16 lafspdgawlasGsdDgtvr 35 
                 l     g+ ++s ++D t+r
  EPX70519.1 366 L-----GDKVISVGMDDTLR 380
                 3.....55566555588887 PP

  == domain 8  score: 1.9 bits;  conditional E-value: 0.35
                 EEEEEETTSSEEEEEETTSEEEE CS
        WD40  14 tslafspdgawlasGsdDgtvri 36 
                 +++a +p+++ +a G++D  v++
  EPX70519.1 438 SCMAAHPSKQEFAVGGEDSCVYV 460
                 5899999***********99986 PP

  == domain 9  score: 18.3 bits;  conditional E-value: 2.3e-06
                 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  l+ H s+vts+ +s+dg++la+G+  g+v ++d
  EPX70519.1 473 QLKNHtSPVTSMVYSHDGKYLACGDASGKVVLYD 506
                 6889*899**************9999****9998 PP

  == domain 10  score: 9.8 bits;  conditional E-value: 0.0011
                 S.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  10 H.ssvtslafspdgawlasGsdDgtvriW 37 
                 H + + +++++++++ la++s D +v+++
  EPX70519.1 520 HtGRILGMSWNSNSTHLATASLDTNVHVY 548
                 855599*********************98 PP

  == domain 11  score: 2.4 bits;  conditional E-value: 0.25
                 EEEEEETTSSEEEEEETTSEEEEE CS
        WD40  14 tslafspdgawlasGsdDgtvriW 37 
                 t + + ++   l++Gs D  ++ W
  EPX70519.1 568 TQVHWLSEDEILSTGS-DAAIKTW 590
                 6777888888899***.*999999 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0      0.12   1.7e+02       8      89 ..      30     110 ..      23     113 .. 0.71
   2 !   10.9   0.0   0.00032      0.44      37      81 ..     188     232 ..     180     236 .. 0.91
   3 !   17.9   0.1     2e-06    0.0028      32      84 ..     227     277 ..     222     284 .. 0.88
   4 ?   -2.4   0.0       4.5   6.2e+03      29      48 ..     340     358 ..     329     393 .. 0.68
   5 !   27.1   0.0   2.8e-09   3.9e-06      10      75 ..     449     515 ..     440     521 .. 0.90
   6 !   12.0   0.1   0.00014      0.19      38      90 ..     521     573 ..     516     575 .. 0.86

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.12
  ANAPC4_WD40   8 DLiAlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldae.sgkvvhslsvksekavtclgW 89 
                  D iA+at++  +l +  n ++ ++   +++    +  +++p+g   a +   g+vr+ d   + k++++  ++ + +++ ++W
   EPX70519.1  30 DRIAYATNKAIILRNISNPEESYQY--NEHTAPTSVAKFSPSGFYVASGDVHGNVRVWDCVgEDKILKNNVAAISGRINDIDW 110
                  6678888777777777788888888..4555555666899******************9761445555444444446777777 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00032
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  +d+ v ++++ p+++ +a + +dg+v lld ++g+ + ++++++ 
   EPX70519.1 188 HDKYVYDVRYAPNDEKFASVGADGKVFLLDGKTGEKILEFNAHKG 232
                  6788999********************************999986 PP

  == domain 3  score: 17.9 bits;  conditional E-value: 2e-06
  ANAPC4_WD40  32 leedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekav 84 
                  +  +++++++ sL+W+pd k L+ + +d +v++ +a +g +++++s  +e++v
   EPX70519.1 227 F--NAHKGTIFSLSWSPDSKKLVTSSADRSVKVWNADDGSLIREWSSMKEQQV 277
                  4..678999***********************************999888766 PP

  == domain 4  score: -2.4 bits;  conditional E-value: 4.5
  ANAPC4_WD40  29 vwtleedkedsevrsLaWkp 48 
                  vw++ +++++s+v++++ ++
   EPX70519.1 340 VWDI-KTQNGSSVQGVSHSN 358
                  6666.566666666665543 PP

  == domain 5  score: 27.1 bits;  conditional E-value: 2.8e-09
  ANAPC4_WD40  10 iAlatedgellvfRlngqrvwtl.eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhs 75 
                  +A++ ed+ ++v+ ++  ++ ++ + +++ s v+s+ +++dgk La + + g+v l+dae+ +v+ s
   EPX70519.1 449 FAVGGEDSCVYVHSFEKDELCEIaQLKNHTSPVTSMVYSHDGKYLACGDASGKVVLYDAETRQVITS 515
                  688899999999999999999996678999*********************************9976 PP

  == domain 6  score: 12.0 bits;  conditional E-value: 0.00014
  ANAPC4_WD40  38 dsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                   +++ +++W+ + + La a  d++v+++++e      +++ ++    t ++W 
   EPX70519.1 521 TGRILGMSWNSNSTHLATASLDTNVHVYSVERPMKYVAVKNAHALGATQVHWL 573
                  678999*************************9877777777777789999996 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.019        26     102     158 ..      60     117 ..      44     125 .. 0.70
   2 !    8.2   0.0    0.0015       2.1      92     171 ..     181     259 ..     164     276 .. 0.70
   3 !   12.5   0.0   7.4e-05       0.1      69     167 ..     444     545 ..     427     554 .. 0.76
   4 ?   -1.7   0.0       1.6   2.2e+03     128     161 ..     546     582 ..     541     586 .. 0.74

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.019
                 S--EEEE-TTSSEEEEE-TTSSS-EEEEEETT.TTEEEEEEE-TT-...-EEEE-TTSSEE CS
       eIF2A 102 krNtiffspkgklvllaGfgnlaGeleiwdvk.kkkkiakaeaana...tlvewspdgryv 158
                 +    +fsp+g +v+    g+++G++ +wd   + k +++  aa +    +++w+ d++ +
  EPX70519.1  60 PTSVAKFSPSGFYVAS---GDVHGNVRVWDCVgEDKILKNNVAAISgriNDIDWDGDSQRI 117
                 5556789999999887...688999*****9955555555555444122467787777655 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.0015
                 CEEEEEEEEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-TT--EE..EE-TTSSEEEEEE-TTT-SSS- CS
       eIF2A  92 vkviskleeqkrNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakaeaanatlv..ewspdgryvlTattaprlrvdn 171
                  +   + + ++   + + p+++ ++  G     G++ ++d k+ +ki +++a + t +   wspd++ ++T++   +++v n
  EPX70519.1 181 YNTSIRCHDKYVYDVRYAPNDEKFASVG---ADGKVFLLDGKTGEKILEFNAHKGTIFslSWSPDSKKLVTSSADRSVKVWN 259
                 5555556666666666666666554444...368899999999999999999888865227999999999998877766655 PP

  == domain 3  score: 12.5 bits;  conditional E-value: 7.4e-05
                 TTSS-EEEEESSSSCEEEEEECS...CEEEEEEEEE..S--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-TT--...EEEE-TTSSEEE CS
       eIF2A  69 pkskefaviyGkmpakvslfdlk...vkviskleeq..krNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakaeaanat...lvewspdgryvl 159
                 p+++efav  G  +++v++++ +   +  i++l+++  +  ++++s  gk+++    g+ +G++ ++d ++++ i++  a+++     + w+ ++++++
  EPX70519.1 444 PSKQEFAV--GGEDSCVYVHSFEkdeLCEIAQLKNHtsPVTSMVYSHDGKYLAC---GDASGKVVLYDAETRQVITSRWAFHTGrilGMSWNSNSTHLA 537
                 67778877..666676766666523455566665541156789********987...689****************99888886222579********* PP

                 EEE-TTT- CS
       eIF2A 160 Tattaprl 167
                 Ta+    +
  EPX70519.1 538 TASLDTNV 545
                 **976554 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 1.6
                 EEEETT...TTEEEEEEE-TT--EEEE-TTSSEEEEE CS
       eIF2A 128 eiwdvk...kkkkiakaeaanatlvewspdgryvlTa 161
                  ++ v+   k+  +++a+a  at+v w  +++ + T 
  EPX70519.1 546 HVYSVErpmKYVAVKNAHALGATQVHWLSEDEILSTG 582
                 5555554445667889999999999999999988875 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.12   1.7e+02     185     217 ..      56      88 ..      35      97 .. 0.79
   2 ?   -1.4   0.0      0.65   8.9e+02     202     226 ..     162     187 ..     126     192 .. 0.71
   3 ?    4.3   0.0     0.012        16     179     215 ..     222     259 ..     210     267 .. 0.88
   4 ?    3.9   0.0     0.016        22     186     221 ..     313     348 ..     289     360 .. 0.84
   5 ?    2.6   0.0     0.038        53     183     235 ..     473     522 ..     458     527 .. 0.69
   6 ?    2.0   0.0     0.058        80     189     216 ..     523     550 ..     518     557 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.12
    Ge1_WD40 185 eehsliveaafspdGtalatasedGevkffqvy 217
                 e+++  + a fsp G  +a     G v+ +   
  EPX70519.1  56 EHTAPTSVAKFSPSGFYVASGDVHGNVRVWDCV 88 
                 344578899*******************99765 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.65
    Ge1_WD40 202 latasedGevkffq.vyledeeeprC 226
                  atas d  v ff  v    +++ rC
  EPX70519.1 162 AATASDDSSVNFFHgVPYRYNTSIRC 187
                 599********996355556667777 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.012
    Ge1_WD40 179 egllkieehs.liveaafspdGtalatasedGevkffq 215
                 e +l+++ h  +i + ++spd   l t+s+d  vk + 
  EPX70519.1 222 EKILEFNAHKgTIFSLSWSPDSKKLVTSSADRSVKVWN 259
                 567899999779***********************985 PP

  == domain 4  score: 3.9 bits;  conditional E-value: 0.016
    Ge1_WD40 186 ehsliveaafspdGtalatasedGevkffqvylede 221
                 ++  i+++ + pd  +l tas dG+   + +  ++ 
  EPX70519.1 313 HQRSITSSFLCPDSKSLYTASYDGVALVWDIKTQNG 348
                 4458999*******************9999988765 PP

  == domain 5  score: 2.6 bits;  conditional E-value: 0.038
    Ge1_WD40 183 kieehs.liveaafspdGtalatasedGevkffqvyledeeeprCLheWkPhdG 235
                 ++++h+  +++ ++s dG  la   + G+v ++     +        +W  h G
  EPX70519.1 473 QLKNHTsPVTSMVYSHDGKYLACGDASGKVVLYDAETRQ----VITSRWAFHTG 522
                 455664389999999999999999999999887654333....33334555555 PP

  == domain 6  score: 2.0 bits;  conditional E-value: 0.058
    Ge1_WD40 189 liveaafspdGtalatasedGevkffqv 216
                  i   ++ ++ t latas d  v+ + v
  EPX70519.1 523 RILGMSWNSNSTHLATASLDTNVHVYSV 550
                 67777889999*************9987 PP

>> HPS3_N  Hermansky-Pudlak syndrome 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.55   7.6e+02      23      65 ..     322     364 ..     312     378 .. 0.74
   2 ?    2.8   0.0     0.054        75       4      40 ..     385     421 ..     382     439 .. 0.82
   3 !    9.3   0.0   0.00055      0.76      22      74 ..     441     494 ..     424     503 .. 0.78

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.55
      HPS3_N  23 vcaagdkLlvatesgcvevydleeeeckvlcrfstvdkvlkia 65 
                 +c  + +L+ a+ +g+  v+d+++++ + ++ +s  ++v+ ++
  EPX70519.1 322 LCPDSKSLYTASYDGVALVWDIKTQNGSSVQGVSHSNQVMDMT 364
                 3444445888999999999999988888889999888887764 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.054
      HPS3_N   4 svHnFksqevvsveqeptavcaagdkLlvatesgcve 40 
                 +   F s  v ++  +p+ vca gd + +at s++  
  EPX70519.1 385 KANAFISESVYTTGYQPVGVCAVGDCIVLATVSDIQV 421
                 56679999**********************9987633 PP

  == domain 3  score: 9.3 bits;  conditional E-value: 0.00055
      HPS3_N  22 avcaagdkLlvatesgcvevyd.leeeeckvlcrfstvdkvlkiaysesGdyva 74 
                 a + +++++ v+ e+ cv v +  + e c+  +  +  + v++++ys+ G+y+a
  EPX70519.1 441 AAHPSKQEFAVGGEDSCVYVHSfEKDELCEIAQLKNHTSPVTSMVYSHDGKYLA 494
                 34445566999***********55557888877778899*************98 PP

>> PD40  WD40-like Beta Propeller Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       2.5   3.5e+03      19      29 ..      28      38 ..      28      41 .. 0.86
   2 ?    6.9   0.1    0.0043       5.9       9      24 ..     232     247 ..     228     250 .. 0.82
   3 ?   -2.6   0.0       4.2   5.8e+03      18      24 ..     324     330 ..     316     341 .. 0.77
   4 ?    4.2   0.0     0.031        43       3      24 ..     473     494 ..     471     494 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 2.5
                TSSEEEEEEEC CS
        PD40 19 DGkrlaFsSdR 29
                +G r+a++ ++
  EPX70519.1 28 NGDRIAYATNK 38
                699****9885 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0043
                 S.EEEEEE-TTSSEEE CS
        PD40   9 gnegaPsfSPDGkrla 24 
                 g +++ s+SPD k+l+
  EPX70519.1 232 GTIFSLSWSPDSKKLV 247
                 6677889*******97 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 4.2
                 TTSSEEE CS
        PD40  18 PDGkrla 24 
                 PD k+l+
  EPX70519.1 324 PDSKSLY 330
                 9999999 PP

  == domain 4  score: 4.2 bits;  conditional E-value: 0.031
                 E--SSSS.EEEEEE-TTSSEEE CS
        PD40   3 rltntpgnegaPsfSPDGkrla 24 
                 +l n++++ ++  +S DGk+la
  EPX70519.1 473 QLKNHTSPVTSMVYSHDGKYLA 494
                 6789999999999*******97 PP

>> WAK  Wall-associated kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0     0.045        62      34      60 ..      25      51 ..      16      59 .. 0.82
   2 ?    8.2   0.0    0.0025       3.5      55      89 ..     324     358 ..     311     369 .. 0.84
   3 ?   -2.0   0.1       3.9   5.4e+03      83     100 ..     423     440 ..     407     483 .. 0.62

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.045
         WAK 34 ttkegCkvaFltdekyslsnvtepekl 60
                t+++g ++a+ t+++  l n+++pe+ 
  EPX70519.1 25 TNRNGDRIAYATNKAIILRNISNPEES 51
                5668899*****************974 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.0025
         WAK  55 tepeklhakgyatveLgWvldtsdssflnslgCkn 89 
                  +++ l++  y+ v L W ++t++ s ++ ++  n
  EPX70519.1 324 PDSKSLYTASYDGVALVWDIKTQNGSSVQGVSHSN 358
                 577899*******************9999887554 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 3.9
         WAK  83 nslgCknlkeyesekkCi 100
                 + l+C ++ +   + +C+
  EPX70519.1 423 RDLKCVSTAKTIYQPSCM 440
                 555555555544444443 PP

>> CPSF_A  CPSF A subunit region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       1.5   2.1e+03      92     117 ..      59      88 ..      25     119 .. 0.61
   2 ?   -0.8   0.0      0.53   7.3e+02      94     147 ..     361     414 ..     357     422 .. 0.82
   3 ?   12.3   0.1   5.6e-05     0.077      72     166 ..     416     513 ..     393     558 .. 0.71

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1.5
                 ----EEEE..TTEEEEE..-SSEEEEEEE- CS
      CPSF_A  92 avtalaef..qGrllvg..vgqkvrvydlg 117
                 a+t++a+f  +G+ +++  v+ +vrv+d+ 
  EPX70519.1  59 APTSVAKFspSGFYVASgdVHGNVRVWDCV 88 
                 455555554445544443445555555544 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.53
                 --EEEETTE.EEEE-SSEEEEEEE-TTS-EEEEEEEE-SS-EEEEEEETTEEEEE CS
      CPSF_A  94 talaefqGr.llvgvgqkvrvydlgedktLlrkafldtqlyvvslkvlgnriivg 147
                   ++ + ++ + vg+  ++r  d++ +  ++ ++ + t++ +v + ++g+ i+++
  EPX70519.1 361 MDMTRLGDKvISVGMDDTLRTVDIKANA-FISESVYTTGYQPVGVCAVGDCIVLA 414
                 55666667745589999**********9.99999999999999999999988876 PP

  == domain 3  score: 12.3 bits;  conditional E-value: 5.6e-05
                 EE-SS--EEEEEEEEEEEES----EEEE...TTEEEEE-SSEEEEEEE-TTS-EEEEEEEE-SS..-EEEEEEE.TTEEEEEESSS-EEEEEE-SSS-- CS
      CPSF_A  72 ievpetnrkLklvhkeevkgavtalaef...qGrllvgvgqkvrvydlgedktLlrkafldtql..yvvslkvl.gnriivgDlmkSvtfveydeenyk 164
                  ++ +  r+Lk v   ++  +++++a     q++ + g  ++v+v+ +++d+ L + a+l++++  +++ ++++ g+++++gD+   v+   yd+e ++
  EPX70519.1 416 VSDIQVLRDLKCVSTAKTIYQPSCMAAHpskQEFAVGGEDSCVYVHSFEKDE-LCEIAQLKNHTspVTSMVYSHdGKYLACGDASGKVV--LYDAETRQ 511
                 3334557899999999998888888887777888888999************.***********7633333333377******976554..46666665 PP

                 EE CS
      CPSF_A 165 li 166
                  i
  EPX70519.1 512 VI 513
                 54 PP

>> IKI3  IKI3 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0    0.0053       7.3     294     331 ..     221     259 ..     187     263 .. 0.91
   2 ?    3.3   0.2     0.012        16      28     143 ..     439     544 ..     415     549 .. 0.66
   3 ?    2.1   0.1     0.028        38     304     333 ..     521     551 ..     510     580 .. 0.80

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.0053
                 XXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXX.XXXXX CS
        IKI3 294 gefslrlekeeeevqsLaWsadSevLavrledr.vqlwt 331
                 ge  l+++ ++ ++ sL Ws dS+ L  +  dr v++w 
  EPX70519.1 221 GEKILEFNAHKGTIFSLSWSPDSKKLVTSSADRsVKVWN 259
                 55567888999999**************999988***96 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.012
                 XXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        IKI3  28 vfdtesdsilivlssteseaaievqrfekdsevevlasleaeeleekkdkivsveyladkeelvlalasGdillvtvdsdaeekeveivGsiesGieaa 126
                 ++ ++ +++ ++++ ++s   + v++fekd+ +  +a     +l+++++ ++s+ y +d + l +  asG+++l+  d ++ +  ++        i  +
  EPX70519.1 439 CMAAHPSKQEFAVGGEDS--CVYVHSFEKDELC-EIA-----QLKNHTSPVTSMVYSHDGKYLACGDASGKVVLY--DAETRQVITSRWAFHTGRILGM 527
                 455555555555555555..4566666666622.333.....335567788888888888888888888888888..6677777777777777777777 PP

                 XXXXXXXXXXXXXXXXX CS
        IKI3 127 awspdeellalvtgeek 143
                 +w+ +   la ++ + +
  EPX70519.1 528 SWNSNSTHLATASLDTN 544
                 77777666666555544 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.028
                 XXXXXXXXXXXXXXXXXX.XXXXXXXXXXXX CS
        IKI3 304 eeevqsLaWsadSevLav.rledrvqlwtis 333
                 + ++  + W+++S+ La  +l  +v ++ ++
  EPX70519.1 521 TGRILGMSWNSNSTHLATaSLDTNVHVYSVE 551
                 5678899**********95556669999875 PP

>> PQQ  PQQ enzyme repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.0    0.0018       2.5       7      26 ..     208     227 ..     204     229 .. 0.84
   2 ?   -3.3   0.0       7.7   1.1e+04       7      22 ..     250     265 ..     247     266 .. 0.71
   3 ?    0.8   0.0      0.39   5.3e+02       5      19 ..     494     509 ..     490     509 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0018
                 ETTSEEEEEETTTCCEEEEE CS
         PQQ   7 sadGylyAlDadTGkvlWrf 26 
                  adG+++ lD +TG+++ +f
  EPX70519.1 208 GADGKVFLLDGKTGEKILEF 227
                 58*************98555 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 7.7
                 ETTSEEEEEETTTCCE CS
         PQQ   7 sadGylyAlDadTGkv 22 
                 sad  +   +ad+G +
  EPX70519.1 250 SADRSVKVWNADDGSL 265
                 6667777779999976 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.39
                 EE.ETTSEEEEEETTT CS
         PQQ   5 lg.sadGylyAlDadT 19 
                 ++ +a G+++ +Da+T
  EPX70519.1 494 ACgDASGKVVLYDAET 509
                 45599*********99 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.77   1.1e+03     122     138 ..     222     238 ..     209     249 .. 0.84
   2 ?    3.5   0.1     0.026        36       3     215 ..     234     455 ..     232     467 .. 0.65
   3 ?    4.2   0.0     0.017        23       3      44 ..     481     522 ..     479     564 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.77
   WD40_like 122 seIkeikiennkiysLs 138
                  +I+e + ++++i+sLs
  EPX70519.1 222 EKILEFNAHKGTIFSLS 238
                 46999999999999998 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.026
   WD40_like   3 iYsidiskkgslilyGgkddkctvlkleslesvsivesfedSvifvklldddlilvvtlDGtillsllenee...evenekieedistvkviddklliG 98 
                 i+s+  s++++ ++  + d  ++v + + + ++    s+++  +     ++dli+ v + G ++    ++++    v  +++    s+ + + + l+  
  EPX70519.1 234 IFSLSWSPDSKKLVTSSADRSVKVWNADDGSLIREWSSMKEQQVGNVWASEDLIISVDVKGVLIYLNPTKDDperFVYGHQRSITSSFLCPDSKSLYTA 332
                 566666666666666666666677777777777766666666666666667777777777776555444444555566666666667777777777777 PP

   WD40_like  99 tnkGsiyvfskdlql..eevllgqsseIkeikiennkiysLs.esafivfdlfsqn.ieykisvkdiktfeiienkdilligtegeililkknvilqki 193
                 ++ G   v++   q+      +++s ++ +++   +k+ s   ++++   d++++  i   +   + + + +    d ++++t ++i +l++ + +   
  EPX70519.1 333 SYDGVALVWDIKTQNgsSVQGVSHSNQVMDMTRLGDKVISVGmDDTLRTVDIKANAfISESVYTTGYQPVGVCAVGDCIVLATVSDIQVLRDLKCVSTA 431
                 777766665544443102334667777777777777777775134455566655441333444456777777788899999999999999999999999 PP

   WD40_like 194 dvegkPecill..vddylivGgsf 215
                 ++ ++P c++   +++ + vGg+ 
  EPX70519.1 432 KTIYQPSCMAAhpSKQEFAVGGED 455
                 999999999973357788888875 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.017
   WD40_like   3 iYsidiskkgslilyGgkddkctvlkleslesvsivesfedS 44 
                 + s+ +s++g++++ G  + k+ +++ e+ +++++   f+  
  EPX70519.1 481 VTSMVYSHDGKYLACGDASGKVVLYDAETRQVITSRWAFHTG 522
                 6678899***************************98888654 PP

>> WD40_3  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       1.9   2.6e+03      23      39 ..     288     304 ..     286     306 .. 0.85
   2 ?   -1.5   0.0       1.9   2.6e+03      27      50 ..     454     477 ..     450     479 .. 0.80
   3 ?    7.9   0.0    0.0021       2.9       6      42 ..     477     513 ..     476     515 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.9
      WD40_3  23 vfiDekgdgfvynPvse 39 
                 + +D kg+++ +nP ++
  EPX70519.1 288 ISVDVKGVLIYLNPTKD 304
                 67999*********987 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 1.9
      WD40_3  27 ekgdgfvynPvseelleipdfpst 50 
                 e++ ++v++  ++el+ei +++++
  EPX70519.1 454 EDSCVYVHSFEKDELCEIAQLKNH 477
                 567789999999999999988776 PP

  == domain 3  score: 7.9 bits;  conditional E-value: 0.0021
      WD40_3   6 HsvgIkklfpnpsGtrlvfiDekgdgfvynPvseell 42 
                 H+ ++++ +   +G +l++ D+ g++ +y + +++++
  EPX70519.1 477 HTSPVTSMVYSHDGKYLACGDASGKVVLYDAETRQVI 513
                 9999**************************9998876 PP

>> PQQ_3  PQQ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0         2   2.7e+03      17      17 ..     199     199 ..     175     221 .. 0.47
   2 ?    2.9   0.0      0.12   1.7e+02      23      40 .]     328     345 ..     316     345 .. 0.86
   3 ?   -2.5   0.0         6   8.3e+03      21      38 ..     367     384 ..     359     385 .. 0.81
   4 ?    6.2   0.1     0.011        16      12      40 .]     480     509 ..     474     509 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 2
       PQQ_3  17 p 17 
                 p
  EPX70519.1 199 P 199
                 1 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.12
       PQQ_3  23 lvyvgtgdGtlyAlDaet 40 
                  +y++++dG     D +t
  EPX70519.1 328 SLYTASYDGVALVWDIKT 345
                 59********99999887 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 6
       PQQ_3  21 gglvyvgtgdGtlyAlDa 38 
                 g++v  +++d tl+ +D 
  EPX70519.1 367 GDKVISVGMDDTLRTVDI 384
                 788899999999988775 PP

  == domain 4  score: 6.2 bits;  conditional E-value: 0.011
       PQQ_3  12 pvnsspavd..gglvyvgtgdGtlyAlDaet 40 
                 pv +s++++  g ++ +g+  G+++ +Daet
  EPX70519.1 480 PV-TSMVYShdGKYLACGDASGKVVLYDAET 509
                 66.67888533779***************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (594 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       444  (0.0247643); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.67u 0.32s 00:00:00.99 Elapsed: 00:00:00.50
# Mc/sec: 3546.83
//
Query:       EPX70520.1  [L=857]
Description: cytokinesis protein Cyk3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.6e-09   36.5   0.1    4.8e-09   35.7   0.1    1.5  1  SH3_1           SH3 domain
    1.4e-07   31.1   0.1    2.6e-07   30.2   0.1    1.5  1  SH3_2           Variant SH3 domain
    2.8e-07   31.0   0.0    6.2e-07   29.9   0.0    1.5  1  Transglut_core  Transglutaminase-like superfamily
     0.0036   17.1   0.0     0.0074   16.1   0.0    1.6  1  SH3_9           Variant SH3 domain


Domain annotation for each model (and alignments):
>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.7   0.1   1.1e-12   4.8e-09       1      48 []      12      59 ..      12      59 .. 0.97

  Alignments for each domain:
  == domain 1  score: 35.7 bits;  conditional E-value: 1.1e-12
                EESSSBEXSSTTBXEBSTTEEEEEEEECSSSEEEEEETTSTEEEEEEG CS
       SH3_1  1 iAlYDYeaeesdELsfkkGDviivleksedgWwkgrlkgtgkeGliPs 48
                +AlY  ++e++++Lsf kG+ i+  +  ++ Ww gr ++t+ +G++Ps
  EPX70520.1 12 RALYAWPGEREGDLSFGKGELIECQSLGDGKWWIGRHINTNTQGIFPS 59
                7***********************999999*****************8 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   0.1   5.8e-11   2.6e-07       4      56 ..      13      64 ..      10      65 .. 0.86

  Alignments for each domain:
  == domain 1  score: 30.2 bits;  conditional E-value: 5.8e-11
                ESS-B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEE..CCCEEEEEGCGEEE CS
       SH3_2  4 aiedyvgedkseLsfkkGdvikvlslgskdsdgwwegev..gGrvGlfPsslvee 56
                a+  + ge ++ Lsf kG++i ++   s ++++ww+g+    +++G+fPs++v++
  EPX70520.1 13 ALYAWPGEREGDLSFGKGELIECQ---SLGDGKWWIGRHinTNTQGIFPSNFVQV 64
                555566788899************...77899*****88879***********97 PP

>> Transglut_core  Transglutaminase-like superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.9   0.0   1.4e-10   6.2e-07       7     102 ..     460     556 ..     455     561 .. 0.87

  Alignments for each domain:
  == domain 1  score: 29.9 bits;  conditional E-value: 1.4e-10
  Transglut_core   7 ltagakdplekakaiyewvrknveys.aprrtpgsrdaeavletgkGncedfaslfvallRalGipaRvvtgylsgeeekeqsvasedaHawvev 100
                     l +ga++pl++++a+y +v+++v+y+ ++ ++++ r++ +v+ +g+G+  ++a l   +l  l i + v+ gyl+++++   + + + +Haw+ v
      EPX70520.1 460 LAKGAESPLQQLRAVYIYVSEHVSYTdHSANGKSFRSPLEVFLSGRGTPFEVALLVKEMLQGLDIWCEVIEGYLKSPDDIYYTRDIKVNHAWNVV 554
                     67899*********************77777777788**************************************98654446666667***988 PP

  Transglut_core 101 yl 102
                      l
      EPX70520.1 555 TL 556
                     76 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   1.7e-06    0.0074       1      49 []      13      63 ..      13      63 .. 0.87

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.7e-06
       SH3_9  1 AlypyepreddeLsLqrGDvitvieesedgWlegs..ltGrtGlvPanyve 49
                Aly+     +  Ls+ +G+ i   +  ++ W+ g+  +t + G +P+n+v+
  EPX70520.1 13 ALYAWPGEREGDLSFGKGELIECQSLGDGKWWIGRhiNTNTQGIFPSNFVQ 63
                667777777788*********9998889******8667***********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (857 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       639  (0.0356406); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.67u 0.29s 00:00:00.96 Elapsed: 00:00:00.45
# Mc/sec: 5708.68
//
Query:       EPX70521.1  [L=369]
Description: hypothetical protein SOCG_04685 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        3.7    8.0   0.0        3.7    8.0   0.0    2.8  2  DUF4124   Domain of unknown function (DUF4124)


Domain annotation for each model (and alignments):
>> DUF4124  Domain of unknown function (DUF4124)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.0   0.00021       3.7       7      20 ..      37      50 ..      35      51 .. 0.84
   2 ?   -1.9   3.3      0.25   4.4e+03      29      47 ..     271     292 ..     237     298 .. 0.67

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.00021
     DUF4124  7 asaaaaevYkWvDa 20
                +  aa+e+Y W+D+
  EPX70521.1 37 SKLAASEIYSWKDN 50
                668**********7 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.25
     DUF4124  29 qPppdgkqa...eqvetappps 47 
                 +P p++k++   e++e +p+ +
  EPX70521.1 271 TPEPQDKNQaiaENIELSPSRQ 292
                 4434444443447777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (369 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       495  (0.0276089); expected 358.6 (0.02)
Passed bias filter:                      267  (0.0148921); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2645.34
//
Query:       EPX70522.1  [L=239]
Description: phospholipase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.8e-45  154.0   0.0    5.4e-45  153.8   0.0    1.0  1  Abhydrolase_2  Phospholipase/Carboxylesterase


Domain annotation for each model (and alignments):
>> Abhydrolase_2  Phospholipase/Carboxylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.8   0.0     3e-49   5.4e-45       3     216 ..      13     228 ..      11     229 .. 0.96

  Alignments for each domain:
  == domain 1  score: 153.8 bits;  conditional E-value: 3e-49
                    EEEEE--SS---EEEEEE--TT--SHHHHHHHH.TT--TTEEEEEE---E.EE-GGGTT-EEE-SS-B--SSTTS.-B-HHHHHHHHHHHHHHHHH CS
  Abhydrolase_2   3 iaevvspkdkaqavviflHGlGdsghawaeaakteaalpnikfifphgpe.lpvtlnggmrmpaWfdlvglspek.kedeagikksaekleelida 96 
                    + +vv++k+   +v+i++HGlGds  ++a aak +++lpn+++i+++g + lp+++  +  +++W+++v+++ +   e+ea+++k ++ l+eli+ 
     EPX70522.1  13 HGQVVAAKEHTYNVIIMMHGLGDSEYSFAHAAK-NIPLPNTSYISLRGVYrLPLDFGTPEGNWMWGEDVHFDTNGdLESEADFSKCLSVLKELIKG 107
                    678999***************************.***************999******************************************** PP

                    HHHTT--GGGEEEEEETHHHHHHHHHHHT-SS..--SEEEEES---TTGGGTTTTS-GGGGG-EEEEEEETT-SSS-HHHHHHHHHHHHTTS-GEE CS
  Abhydrolase_2  97 elkkgipssriiigGFSqGaalalylaltlpk..klggivafsgalplsqklessatavtkklpilqiHgeeDpvvplalgkaakevlkkllkkve 190
                     +++gi s ri+++GF+qG++ aly + +l    + gg+++f+g lpl+++l+ss++ + ++ ++++   + D +++ +l+k++  v + +++++e
     EPX70522.1 108 IIDQGILSTRIFFFGFGQGGMAALYCVSQLASiyQFGGVFSFGGKLPLAMTLPSSPFMTSVYFFEKRKNSSIDDYEEGRLKKTFRSVQRICWNRDE 203
                    *************************876666656************************************************************** PP

                    EEEETT--SS--HHHHHHHHHHHHHH CS
  Abhydrolase_2 191 lksyeglaHsideeemqdikeflkkl 216
                    +++++ ++++++ +++++i++ l+ +
     EPX70522.1 204 KTDMP-SSPNEWFVFVEAISKKLYVH 228
                    *****.***************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       403  (0.0224776); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1659.60
//
Query:       EPX70523.1  [L=481]
Description: STE/STE20/YSK protein kinase Sid1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.1e-66  225.0   0.0    2.1e-66  224.0   0.0    1.5  2  Pkinase         Protein kinase domain
    1.1e-48  165.8   0.0    1.8e-48  165.1   0.0    1.3  1  Pkinase_Tyr     Protein tyrosine kinase
    7.7e-07   28.2   0.4    3.3e-06   26.2   0.0    1.9  2  Pkinase_fungal  Fungal protein kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  224.0   0.0   3.6e-70   2.1e-66       2     264 .]      10     260 ..       9     260 .. 0.94
   2 ?   -2.8   0.0      0.54   3.2e+03     216     264 .]     417     465 ..     401     465 .. 0.71

  Alignments for each domain:
  == domain 1  score: 224.0 bits;  conditional E-value: 3.6e-70
                 EEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHHH CS
     Pkinase   2 ekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseeea 100
                   +ek+G+GsfG V +a+ek++g + AvK+i+ e   +++ +++ +E+++l +++hpn++++y++f + + l++++e+++gg++  ll+ k+ l+e+++
  EPX70523.1  10 ILKEKIGSGSFGIVWRAIEKSSGATLAVKQIDLEASVDDT-SEIEQEVHMLSNCSHPNVIKYYGCFVQGHVLWILMEHMDGGSVSGLLK-KQGLEEKTI 106
                 6789******************************999977.59*********************************************7.688****** PP

                 HHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEE.TTTEEEE-SGTTSEESSSSCS.BCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-ST CS
     Pkinase 101 kkiakqilegleylHskgiiHrDlKpeNiLid.ekgelKitDFGlakelesssk.ltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgkppf 197
                 + i++++l+gl ylH+++ iHrD+K +NiL++ ++ge+K++DFG+a++l++  +   +fvgt+ ++APEv+++++y++++D+WslG++ +e+    pp 
  EPX70523.1 107 SIILRETLKGLTYLHDQNKIHRDIKAANILLSsTTGEVKLADFGVAAQLSNAASrRYTFVGTPFWMAPEVIQQTSYGTAADIWSLGITAIEMAEAAPPR 205
                 ********************************999****************998899*************************************99999 PP

                 TTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 198 sgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 +           ++ +  i++i   ++e  +  s+ s e++d+++++lk  p +R + ++ll+hp++
  EPX70523.1 206 A----------TMHPMRVIFEIP--QSEPPKLSSNYSLEFRDFVSRCLKLHPASRRSSSSLLDHPFI 260
                 9..........455555566664..45677788899*****************************97 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.54
                 HHHHCTSHH...HHHTTS-HHHHHHH.HHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 216 ilkilgetkeklpeaseiseeakdll.kkllkkdpkkRltaeellqhpyl 264
                 +lk+lg  ++++  +++ s+ +k+++ ++ l+ ++kkR  +++ll +++l
  EPX70523.1 417 SLKLLGS-TFDSLDEDTSSRLMKSFMfDSKLNPKKKKRGPIAQLLFSRWL 465
                 4455544.555666666788888887467799999999999999888886 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.1   0.0   2.9e-52   1.8e-48       3     255 ..      11     254 ..       9     257 .. 0.94

  Alignments for each domain:
  == domain 1  score: 165.1 bits;  conditional E-value: 2.9e-52
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTS CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekekl 100
                  l++k+G+G+fG V+++  k    ++  + avK+++ ea+ ++++e+ +e++++++++hpn++k++g+ ++++ l+i++e ++gG+++  L+k+    l
   EPX70523.1  11 LKEKIGSGSFGIVWRAIEK----SSGATLAVKQIDLEASVDDTSEIEQEVHMLSNCSHPNVIKYYGCFVQGHVLWILMEHMDGGSVSGLLKKQ---GL 101
                  689**************99....8999***************************************************************998...99 PP

                  BHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETT.EEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHHHH CS
  Pkinase_Tyr 101 tlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenk.vvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfGvllwE 197
                  + k++  +  +  kG+ yL++++ +Hrd+ a N+Lls+++  vk++DfG+a ++  ++  +++ +      WmapE+++++++ +++D+Ws G++ +E
   EPX70523.1 102 EEKTISIILRETLKGLTYLHDQNKIHRDIKAANILLSSTTgEVKLADFGVAAQL--SNAASRRYTFVGTPFWMAPEVIQQTSYGTAADIWSLGITAIE 197
                  999999999***************************98655*************..455556666677889*************************** PP

                  HHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHH CS
  Pkinase_Tyr 198 iftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfsel 255
                  +++ ++ p +++++++v+  + +++  +  ++ + e+ +++++c++ +p++R + s+l
   EPX70523.1 198 MAE-AAPPRATMHPMRVIFEIPQSEPPKLSSNYSLEFRDFVSRCLKLHPASRRSSSSL 254
                  *99.99**********************************************987776 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   0.0   5.5e-10   3.3e-06     312     390 ..     110     181 ..     100     191 .. 0.87
   2 ?   -0.5   0.4     0.069   4.2e+02     187     273 ..     275     359 ..     274     419 .. 0.56

  Alignments for each domain:
  == domain 1  score: 26.2 bits;  conditional E-value: 5.5e-10
  Pkinase_fungal 312 lrDaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlkgee 390
                     lr+ +kg+  L+ +++ +HrDi + Nil+       + +  L+D+ +a +ls  +++s + + +GT+ +ma ev+++++
      EPX70523.1 110 LRETLKGLTYLH-DQNKIHRDIKAANILLS----STTGEVKLADFGVAAQLS--NAASRRYTFVGTPFWMAPEVIQQTS 181
                     88999*******.9999*************....4466789***********..67888899************99755 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.069
  Pkinase_fungal 187 EaelLkkaeergvegvarlvahedveekdddiaeiRkgldvtkaekfrskrkvvsssssqe.lsskaevklkksesskkvekrsvdss 273
                     E ++L+++e+++  ++      ++++ + ++++++++++      +f+++ ++ s   +++ ls ++  ++k ++s+++ + +s + +
      EPX70523.1 275 ENKILNEVEQNSEDDLDP-GTTNTIK-QPNSTTHLKNSTIDDGW-NFEETVRISSPHETKKnLSVETTKPQKTETSNSDFTFSSLHPN 359
                     566777776666666666.3444443.55555665555443333.4444433222222222344444444444555555554444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (481 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       521  (0.0290591); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3345.61
//
Query:       EPX70524.1  [L=1197]
Description: inositol polyphosphate phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.1e-12   45.8   0.1    1.1e-11   44.7   0.0    1.7  2  Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family
  ------ inclusion threshold ------
        0.7   10.5   9.5         15    6.2   0.0    4.5  5  PQQ_3          PQQ-like domain


Domain annotation for each model (and alignments):
>> Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.0      0.92   8.2e+03      67      88 ..     666     687 ..     657     704 .. 0.77
   2 !   44.7   0.0   1.3e-15   1.1e-11       2     233 .]     803    1121 ..     802    1121 .. 0.74

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 0.92
                    SSSTTSSEEEEEECSTEEEEEE CS
                    xxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos  67 ggggggnggavlsrfpltslfr 88 
                    ++g+ +++ +++s+ + + ++ 
     EPX70524.1 666 FYGHVDGKISIYSKTQYRFVEL 687
                    6789999*******99977744 PP

  == domain 2  score: 44.7 bits;  conditional E-value: 1.3e-15
                     EEEESTG.CHHHHTHHHHHHHHHHHHHHC.TT..SEEEEEEEBSCTCHHHHHHHHH.........TTCEEEEECCH.................. CS
                     xxxxxxx.xxxxxxxxxxxxxxxxxxxxx.xx..xxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxx.................. RF
  Exo_endo_phos    2 twNvngq.aspalgssrrsdrladlltay.da..DvlgLQEvdddelsriplllal.........ggflgasstsp.................. 64  
                     +wN +   +s++ + ++ sd +++ll+++ ++   v g+QE+ d e   + + ++l                   +                  
     EPX70524.1  803 SWNAGASkPSDFKSQDAGSDFIKALLKENgYPdiVVFGFQELVDLENKKLTAKSLLssstknnasN---------Sdnisrqyrlwrerlesem 887 
                     899999995566666667********999855336888***7777766666666557766433330.........0334467777777777888 PP

                     ...........................................ECSSSTTSSEEEEEECSTE..EEEEEEEEEETSSSSGCEEEEEEEEEEEEE CS
                     ...........................................xxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos   65 ...........................................tgggggggnggavlsrfpl..tslfrrtfiefndlvaalrreplaakleql 113 
                                                                tg gg +gn+ga+++rf +  ts+        n++ aa+ +   a+++   
     EPX70524.1  888 arsdpkseyqvlvcenlvglfscvfvksalknkirmlqtttvkTGLGGLHGNKGAIVIRFLIddTSF-----CIVNCHLAAGQTSKAARNNDLA 976 
                     8888888888888888888999999999**********************************77777.....3333333333333333333333 PP

                     EE..CCCHHGHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-SSSTSGGGBSCGHHHHHHCTTTHHSSCESCETTTTTTTTTTTEB-B...... CS
                     xx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...... RF
  Exo_endo_phos  114 ni..ashrdhdlvrdlqllalllqvealnadrgapvivaGDfNarpsdddsrvlrtrglalapapvglyllgggptptyvtraggsrl...... 199 
                     +i       +d+  + +l      ++  +   ++ +i+ GD+N+                                          r+      
     EPX70524.1  977 TIldSAALTPDSNEMDRLNSFEAGGDGSQILDHEVCILHGDLNY------------------------------------------RInllrpk 1028
                     33544455555555555555555555556666666666******..........................................99999999 PP

                     ..................................................................EEEEEECHHHCCEEEEEEECCHHEECTS CS
                     ..................................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos  200 ..................................................................Drilaspalalfrsgvlppplalvrrea 227 
                                                                                       Dri +++        +   ++  +rr +
     EPX70524.1 1029 vndllkkkdlktllesdqltqerkrnagfrlrtfsepeiafaptykydvnsdrydssekkrvpawcDRICFRG-------DTDYVYAENYRRHE 1115
                     9999999999999999999999999999999999999999999999999*****************8888887.......33333333333348 PP

                     SCSSSB CS
                     xxxxxx RF
  Exo_endo_phos  228 ltlSDH 233 
                     + +SDH
     EPX70524.1 1116 VRASDH 1121
                     889**9 PP

>> PQQ_3  PQQ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.1      0.18   1.6e+03      18      37 ..     477     495 ..     466     498 .. 0.72
   2 ?    5.1   0.3    0.0038        34       5      33 ..     503     540 ..     501     541 .. 0.75
   3 ?    6.2   0.0    0.0017        15      16      39 ..     609     631 ..     593     632 .. 0.87
   4 ?   -3.0   0.0       1.3   1.2e+04      22      33 ..     663     674 ..     650     675 .. 0.70
   5 ?    1.1   0.1     0.069   6.2e+02      15      39 ..     697     721 ..     689     722 .. 0.79

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.18
       PQQ_3  18 avdgglvyvgtgdGtlyAlD 37 
                 +v+g  ++v++ +G ++ +D
  EPX70524.1 477 VVSGECLVVAG-NGAFRVYD 495
                 66666666665.69999988 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.0038
       PQQ_3   5 Wsvqlpg.pvnssp.........avdgglvyvgtgdGtl 33 
                 W v+l++ +v +++         a dg+ v +gt dG l
  EPX70524.1 503 WHVPLGDvKV-TAMsfkpsgdkvADDGRFVWIGTRDGVL 540
                 8899987665.445778899993445567********87 PP

  == domain 3  score: 6.2 bits;  conditional E-value: 0.0017
       PQQ_3  16 spavdgglvyvgtgdGtlyAlDae 39 
                 +++vd+ l+ v+ g  ++y +D++
  EPX70524.1 609 AMVVDDSLLWVVVG-KSIYVYDPD 631
                 469**********9.*******97 PP

  == domain 4  score: -3.0 bits;  conditional E-value: 1.3
       PQQ_3  22 glvyvgtgdGtl 33 
                 +lv+ g  dG++
  EPX70524.1 663 DLVFYGHVDGKI 674
                 899**9999987 PP

  == domain 5  score: 1.1 bits;  conditional E-value: 0.069
       PQQ_3  15 sspavdgglvyvgtgdGtlyAlDae 39 
                 ss++ + +++ ++ + G +y +Da 
  EPX70524.1 697 SSLVGVSNTIWAAYTTGMIYVFDAS 721
                 6666667788888889*******96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1197 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1001  (0.0558313); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.82u 0.31s 00:00:01.12 Elapsed: 00:00:00.46
# Mc/sec: 7814.82
//
Query:       EPX70525.1  [L=380]
Description: septin Spn4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   2.2e-105  352.0   0.2   3.5e-105  351.3   0.2    1.3  1  Septin           Septin
    3.1e-06   26.9   0.6    0.00021   20.9   0.1    2.5  2  GTP_EFTU         Elongation factor Tu GTP binding domain
    2.2e-05   24.4   0.1    0.00021   21.2   0.0    2.5  2  RsgA_GTPase      RsgA GTPase
    9.3e-05   22.5   0.0    0.00023   21.2   0.0    1.7  1  MMR_HSR1         50S ribosome-binding GTPase
     0.0023   18.2   2.3     0.0026   18.0   0.1    2.2  2  AAA_22           AAA domain
     0.0064   16.7   0.0      0.015   15.5   0.0    1.6  1  Roc              Ras of Complex, Roc, domain of DAPkinase
  ------ inclusion threshold ------
      0.013   16.0   1.2      0.078   13.5   0.0    2.2  2  ABC_tran         ABC transporter
      0.018   14.7   0.0      0.033   13.9   0.0    1.5  1  AAA_24           AAA domain
      0.033   14.6   0.2       0.22   11.9   0.1    2.4  3  RNA_helicase     RNA helicase
      0.041   13.2   1.5      0.061   12.6   0.0    1.9  2  AIG1             AIG1 family
      0.045   13.5   1.0       0.84    9.4   0.2    2.9  2  PduV-EutP        Ethanolamine utilisation - propanediol utili
      0.068   13.5   0.1       0.24   11.8   0.0    1.9  2  AAA_16           AAA ATPase domain
      0.091   12.5   0.1       0.27   10.9   0.0    1.7  2  IstB_IS21        IstB-like ATP binding protein
      0.098   12.4   0.0       0.18   11.5   0.0    1.4  1  Sigma54_activat  Sigma-54 interaction domain
       0.23   11.4   1.3          1    9.4   0.0    2.3  2  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
        1.6    8.8   4.2         19    5.2   0.0    3.0  3  Dynamin_N        Dynamin family


Domain annotation for each model (and alignments):
>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  351.3   0.2  3.1e-108  3.5e-105       1     276 [.      25     300 ..      25     305 .. 0.97

  Alignments for each domain:
  == domain 1  score: 351.3 bits;  conditional E-value: 3.1e-108
                 XEEEEEEEEEEBTTSSCCCCCCTTSSSS------------.------S-EEEEEEEEETTCEEEEEEEE---BSSSSSHHCCCHHHHHHHHHHHHHHHH CS
      Septin   1 kgieftlmvvGesglGkttlintlfetdlieeekleease.kkkktveikkkkvvieedgvklnltviDtpgfGdavdnskswepiveyideqfeeylr 98 
                 +g  +tlm++GesglGktt+ ntlf+t+++++  +e++++ +++k+vei+ +k+++ee++++l+lt+iDtpgfGd+++n+ +we i+e+i++q+e+y+r
  EPX70525.1  25 NGAALTLMLCGESGLGKTTFCNTLFSTSIKPHMDIETRRSkHMEKSVEIEITKAELEEKNFHLRLTMIDTPGFGDFINNTGCWESILEFIEDQHESYMR 123
                 6899****************************8888776648999****************************************************** PP

                 HCTSS--SS-----EEEEEEEE-TTSSSS-HHHHHHHHHHTTTS-EEEEESSGGGS-HHHHHHHHHHHHHHHHHTT--------SSSS-SCCHHHHHHH CS
      Septin  99 eesklkRkkivDkRvHaclyfisPtghglkpldvelmkklsekvnliPviaKaDtltkeElkefKkkireeleeeeikiyklpdeeededeeakelsek 197
                 ++++ +R+ki+D R+Haclyf++P+ +gl+p+d+e+mk+l ++vnliPviaK+D+ t+++l   K++i + l+ ++++iyk p+++e +   ++++ + 
  EPX70525.1 124 QDQQPDRTKIIDMRIHACLYFLRPVRNGLRPMDLEAMKRLCKRVNLIPVIAKSDMYTRRDLAMYKTRIAQVLDYHQVNIYK-PSIDEGD-PVFQRQIQG 220
                 *********************************************************************************.8888877.7889***** PP

                 HHHC-SEEB-SSSSEEEE.SSSEEEEEEETTEEEETT-TTT-SCCHHHHHHHHHCHHHHHHHHHHTHHHHHHHHHH-XXX CS
      Septin 198 lkeslPfaivgsneliek.kgkkvrgRkypWGvvevenekhsdFlkLrklllkthledLkevteellYetyRseklsklk 276
                 + +++Pfaiv+s++ i++ +g+ v+gRkypWG+veve e+h+dF++Lr+ll+++ + dL+++te+++Ye+yR+e+++ ++
  EPX70525.1 221 IISAMPFAIVSSEDDIRTtDGRVVKGRKYPWGIVEVESEEHCDFKQLRNLLIRSCMLDLIQRTEDIIYEEYRQEQMQVRQ 300
                 *****************99********************************************************99776 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.1   1.9e-07   0.00021       5      87 ..      30     104 ..      27     109 .. 0.79
   2 ?    3.6   0.0     0.038        43     121     174 ..     165     231 ..     149     281 .. 0.73

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 1.9e-07
                 EEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHHHHHSTHCHSHHHHHHTSCSSCEEEEEETTCSSEEEEEEEESSSGGGHHHH CS
    GTP_EFTU   5 nigiighvDhGKtTLtdrLlyktgaiskkgekaeeervlDtlkeErergiTiksaaisleketkkylinliDtPGHvdFskev 87 
                 +++++g    GKtT++ +L  ++ + +++    e      ++++  e+ + i+++ ++le++  + ++++iDtPG  dF++++
  EPX70525.1  30 TLMLCGESGLGKTTFCNTLFSTSIKPHMD---IE-----TRRSKHMEKSVEIEITKAELEEKNFHLRLTMIDTPGFGDFINNT 104
                 5678999999*********9666555542...22.....356777888888999999999667777899***********996 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.038
                 TTTEEEEEEESCGST.HHHHHHHHHHHHHHHHHHHHHHHHHHHTTT................TTEEEEEEB CS
    GTP_EFTU 121 egvpiivfiNKmDrl.kaelkeiveevkqklsrkeeklekygekge................kevpvvfgS 174
                 ++v++i +i K D+  + +l + ++ + q l+ ++ ++ k     +                + +p++ +S
  EPX70525.1 165 KRVNLIPVIAKSDMYtRRDLAMYKTRIAQVLDYHQVNIYKP----SidegdpvfqrqiqgiiSAMPFAIVS 231
                 5899**********999999999999999995443333222....12222444444444444444555554 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   1.9e-07   0.00021      98     163 ..      27      99 ..       9     102 .. 0.62
   2 ?   -0.7   0.0       1.1   1.2e+03      46      75 ..     166     194 ..     161     219 .. 0.71

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 1.9e-07
                  TTSEEEEECSTTSSHHHHHHHHCTT-----S--------------SEEEEEETT.........TEEEESS-SSSS CS
  RsgA_GTPase  98 kdktsvlvGqSGvGKStLinallpelelktgevseklgrGkhTTtavellelae.........gglliDtPGfre 163
                  +  t +l+G+SG GK+t+ n+l ++      ++ ++  r kh  ++ve+   ++           ++iDtPGf  
   EPX70525.1  27 AALTLMLCGESGLGKTTFCNTLFSTSIKPHMDIETR--RSKHMEKSVEIEITKAeleeknfhlRLTMIDTPGFGD 99 
                  456889***************998754444444443..33333333332111111122333336889*****976 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 1.1
                  T-EEEEEEE-GGG--HHHHHHHHHHHHHHT CS
  RsgA_GTPase  46 giepvivlnKiDlleeeeeleelkeeleal 75 
                  +++++ v+ K D++++++ l  +k++++++
   EPX70525.1 166 RVNLIPVIAKSDMYTRRD-LAMYKTRIAQV 194
                  677888999*****9999.55555555443 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0     2e-07   0.00023       3      68 ..      32     125 ..      30     175 .. 0.52

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 2e-07
                 EEEESTTSSHHHHHHHHHT.......S.TEEESSSTTSSSSEEEEEEEETTEE....EEEEECGGC................SSHHHHHHHHHH CS
    MMR_HSR1   3 aivGrpNvGKStLinaltg.......e.kaivsdkpgtTrdinegrvklkgke....ielvDtpGl................iegaseekglgk 68 
                 ++ G +  GK+t+ n+l+        + + + s++  +  +i+  + +l++k+    ++++DtpG+                ie+++e+ + ++
  EPX70525.1  32 MLCGESGLGKTTFCNTLFStsikphmDiETRRSKHMEKSVEIEITKAELEEKNfhlrLTMIDTPGFgdfinntgcwesilefIEDQHESYMRQD 125
                 789**************97444343312334444444444444444443322233339*******77766766666665444343333332222 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.1   2.3e-06    0.0026       6      38 ..      29      66 ..      24     139 .. 0.67
   2 ?   -1.1   0.3       1.8   2.1e+03      74      87 ..     317     330 ..     253     372 .. 0.63

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 2.3e-06
      AAA_22  6 gilvvtGesGtGKTtllrrlleqldeeakaee......e 38
                  l+++GesG GKTt +++l+++  + ++ +       +
  EPX70525.1 29 LTLMLCGESGLGKTTFCNTLFSTS-IKPHMDIetrrskH 66
                5689*****************985.33333336665653 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 1.8
      AAA_22  74 sseellealeqalr 87 
                 ++e l++++++++r
  EPX70525.1 317 EEENLRRRFTEQVR 330
                 33333333333333 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   1.3e-05     0.015       2      65 ..      31      96 ..      30     107 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.3e-05
                EEEESSTTSSHHHHHHCHCT-CCC-EEE.TTTTEEEEEEECGGSG..GCTTBTTTTCEEEEEEEE-S CS
         Roc  2 vvlvGdsgvGKtsllkrfvedkfsekek.stigvdfltkevtkik..gvendkkvkkvklniWDtaG 65
                ++l+G+sg GKt++++ + + +++++ + +t   + ++k+v +i+  + e ++k  +++l + Dt G
  EPX70525.1 31 LMLCGESGLGKTTFCNTLFSTSIKPHMDiETRRSKHMEKSV-EIEitKAELEEKNFHLRLTMIDTPG 96
                79********************9988651666666777766.5551144444444456667777766 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   6.9e-05     0.078      13      63 ..      30      77 ..      25     141 .. 0.70
   2 ?    0.5   0.8      0.72   8.1e+02      31      74 ..     287     339 ..     273     377 .. 0.57

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 6.9e-05
                EEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEE CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 13 kvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigv 63
                ++ + Ge+G GK+t++++l   + +   +i  + + +k+  ++s++ ei  
  EPX70525.1 30 TLMLCGESGLGKTTFCNTLFSTSIKPHMDI--ETRRSKH-MEKSVEIEITK 77
                57899*************999887655555..5555555.33444444443 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.72
                 HTTSS--SEEEE.........EETTCEGGGB-HHHCCHCEEEE-SS--S-TTS CS
                 xxxxxxxxxxxx.........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  31 lagllkpteGei.........lldgkdlkeqeleslrkeigvlpqepqlfpel 74 
                 +++++++++ ++         ++d++++ke+e++  r+  + + qe+  f++ 
  EPX70525.1 287 IYEEYRQEQMQVrqygepklrTIDNTKFKEEEENLRRRFTEQVRQEEARFRQW 339
                 45555555555566666666677888888877777777777777774444333 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0     3e-05     0.033       3      24 ..      29      52 ..      27     135 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 3e-05
      AAA_24  3 lkiliyGpsgiGKTtlakel..gp 24
                l +++ G+sg GKTt++++l  + 
  EPX70525.1 29 LTLMLCGESGLGKTTFCNTLfsTS 52
                6789***************96633 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   0.00019      0.22       2      23 ..      32      53 ..      31      70 .. 0.75
   2 ?   -1.8   0.0       3.5   3.9e+03      78      96 ..      69      87 ..      52      92 .. 0.79
   3 ?   -2.7   0.0       6.7   7.5e+03      67      89 ..     154     176 ..     145     187 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00019
  RNA_helicase  2 wlyGpsgeGKStlakeLakall 23
                  +l+G+sg GK+t++++L ++  
    EPX70525.1 32 MLCGESGLGKTTFCNTLFSTSI 53
                  79**************866544 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 3.5
  RNA_helicase 78 sstpyplnmasleekgtlf 96
                  +s+++++ +a+leek+ + 
    EPX70525.1 69 KSVEIEITKAELEEKNFHL 87
                  6778889999999998665 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 6.7
  RNA_helicase  67 psdlaelirlvsstpyplnmasl 89 
                   p+dl+ + rl++ +++++  a+ 
    EPX70525.1 154 PMDLEAMKRLCKRVNLIPVIAKS 176
                   55667777777777777766654 PP

>> AIG1  AIG1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   5.4e-05     0.061       1      63 [.      29     101 ..      29     116 .. 0.79
   2 ?   -1.7   0.8       1.3   1.5e+03     150     184 ..     336     371 ..     277     378 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 5.4e-05
                 EEEEEESSTTSSHHHHHHHHHTS--........SS--TTTS---SS-EEEEEEETTEE..EEEEE--SCCCTT CS
        AIG1   1 ltivlvGktgnGkSaTgNsilgkka........Fesklsaqsvtkkcqkksrtwdgkk..inViDTPglfdls 63 
                 lt++l G +g Gk +  N++  +++         +sk  ++sv  + +k++ ++++++  +  iDTPg  d  
  EPX70525.1  29 LTLMLCGESGLGKTTFCNTLFSTSIkphmdietRRSKHMEKSVEIEITKAELEEKNFHlrLTMIDTPGFGDFI 101
                 5899****************55555455455558999999***99999999988886511689*****87765 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.3
                 HHHTTTSEEEE.ETTHHHHHHHHHHHHHHHHHHHHH CS
        AIG1 150 lkecgnRvvlf.nnktaskeekeeQvkellelveai 184
                 +++ ++R ++  +n +++ e ++ Q k+l   +e++
  EPX70525.1 336 FRQWEQRLIAErDNLNKDLEAQHVQIKQLELEIERL 371
                 345556665531555677777777777775556655 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.2   0.00075      0.84       4      27 ..      31      54 ..      29     128 .. 0.86
   2 ?   -1.4   0.0       1.6   1.8e+03      85     100 ..     211     226 ..     173     246 .. 0.69

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00075
   PduV-EutP  4 illiGkvgsGKttLtqalkgeelk 27
                ++l G++g GKtt +++l   ++k
  EPX70525.1 31 LMLCGESGLGKTTFCNTLFSTSIK 54
                79**************99886665 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1.6
   PduV-EutP  85 asvfnkeviGiitkid 100
                   vf++++ Gii  + 
  EPX70525.1 211 DPVFQRQIQGIISAMP 226
                 3578999999987765 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00021      0.24      21      50 ..      25      55 ..      13     132 .. 0.81
   2 ?   -1.4   0.2       2.3   2.6e+03     117     127 ..     323     333 ..     258     374 .. 0.59

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00021
      AAA_16 21 sgrpelvllsGesGvGKsslvrellr.alek 50
                 g    ++l GesG GK++  ++l+  +++ 
  EPX70525.1 25 NGAALTLMLCGESGLGKTTFCNTLFStSIKP 55
                45558999*************9999624443 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 2.3
      AAA_16 117 srllellkrll 127
                 +r+ e++++  
  EPX70525.1 323 RRFTEQVRQEE 333
                 23333322222 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00024      0.27      49     122 ..      30     100 ..      23     121 .. 0.79
   2 ?   -2.4   0.1         3   3.3e+03       6      36 ..     296     326 ..     291     333 .. 0.65

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00024
   IstB_IS21  49 nivllGpsGvGKshlaialgveavraglsvlfvrvedLveelkrarrdgklaralkrllkvdllilDdlgllpl 122
                  ++l+G sG GK+ +  +l    ++  + +   r + + ++++++ ++ +l+++     + +l ++D  g+ ++
  EPX70525.1  30 TLMLCGESGLGKTTFCNTLFSTSIKPHMDIETRRSKHMEKSVEIEITKAELEEK---NFHLRLTMIDTPGFGDF 100
                 589************************************999999888887765...34556666666666555 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 3
   IstB_IS21   6 trlrlaklpaqktledidfraarsldkrkvk 36 
                 +++r+   p+ +t+++ +f+++++  +r+++
  EPX70525.1 296 MQVRQYGEPKLRTIDNTKFKEEEENLRRRFT 326
                 5555555677788888999887766665544 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00016      0.18      17      48 ..      23      54 ..       9      79 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00016
                     HHCTSSS-EEEECSTTSSHHHHHHHHHHHSTT CS
  Sigma54_activat 17 kvaktdlsvlitGesGtGKellaraiheaskr 48
                     +     l++++ GesG GK+++ ++++++s +
       EPX70525.1 23 SRNGAALTLMLCGESGLGKTTFCNTLFSTSIK 54
                     333445999*****************997754 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.0   0.00092         1      19      41 ..      28      50 ..      11      60 .. 0.76
   2 ?   -0.4   0.8      0.95   1.1e+03      65     106 ..     297     347 ..     285     371 .. 0.63

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00092
                TEEEEEEESTTSSHHHHHHHHHH CS
        TsaE 19 gdvilLeGdLGaGKTtlvrglak 41
                + +++L G+ G GKTt++  l +
  EPX70525.1 28 ALTLMLCGESGLGKTTFCNTLFS 50
                34699*************98875 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.95
                 S........EEEEE-TT-SSTHHHHHCTTCCCCSTSCEEEEETGGGG.CCC CS
        TsaE  65 g........lyHfDlYRledeeeleelgleeyleeeavvlvEWpekl.eel 106
                 +        l  +D  ++++eee  +  ++e +++e+  +  W ++l +e 
  EPX70525.1 297 QvrqygepkLRTIDNTKFKEEEENLRRRFTEQVRQEEARFRQWEQRLiAER 347
                 455555555888899999999998899999999877799999999942222 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0     0.019        22       2      35 ..      32      64 ..      31      85 .. 0.76
   2 ?    5.2   0.0     0.017        19      83     113 ..      68      99 ..      53     126 .. 0.58
   3 ?   -1.5   1.0       2.1   2.3e+03      52      80 ..     322     351 ..     280     377 .. 0.55

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.019
                EEEEBTTTTHHHHHHHHHTS--S---SSS---S- CS
   Dynamin_N  2 avvGsqSsGKSSvlnaLlgedilprgpnptTrrp 35
                +++G+   GK+++ n L    i p    + Trr 
  EPX70525.1 32 MLCGESGLGKTTFCNTLFSTSIKPH-MDIETRRS 64
                689****************998885.44556655 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.017
                 SSS--SS-EEEEEEETT.S-SEEEEE---B-S CS
   Dynamin_N  83 nkgiskkvillkilsll.vkgltlvDlPGlds 113
                  k++  ++++ +  + +   +lt++D+PG+ +
  EPX70525.1  68 EKSVEIEITKAELEEKNfHLRLTMIDTPGFGD 99 
                 3444333333333322214689*******987 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 2.1
                 .SSEEEE.T-EB--CHHHHHHHHHHHHHHH CS
   Dynamin_N  52 keelkek.ekkledfsevreeieketekia 80 
                 + ++ e+ ++++  f + ++ + +e+++++
  EPX70525.1 322 RRRFTEQvRQEEARFRQWEQRLIAERDNLN 351
                 222223344444444444444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (380 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1277  (0.0712254); expected 358.6 (0.02)
Passed bias filter:                      527  (0.0293937); expected 358.6 (0.02)
Passed Vit filter:                        78  (0.00435049); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.57u 0.30s 00:00:00.86 Elapsed: 00:00:00.46
# Mc/sec: 2508.19
//
Query:       EPX70526.1  [L=367]
Description: tRNA methyltransferase complex catalytic subunit Cpd1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.6e-100  335.9   0.0     2e-100  335.6   0.0    1.1  1  GCD14            tRNA methyltransferase complex GCD14 subunit
    0.00091   19.0   0.0      0.002   17.9   0.0    1.7  2  PCMT             Protein-L-isoaspartate(D-aspartate) O-methyl
     0.0015   18.3   0.0     0.0031   17.3   0.0    1.4  1  GCD14_N          tRNA methyltransferase complex GCD14 subunit
  ------ inclusion threshold ------
      0.055   13.3   0.0      0.099   12.4   0.0    1.5  1  Methyltransf_31  Methyltransferase domain
       0.17   12.6   3.7       0.41   11.4   3.7    1.6  1  MAGE_N           Melanoma associated antigen family N termina


Domain annotation for each model (and alignments):
>> GCD14  tRNA methyltransferase complex GCD14 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  335.6   0.0  5.5e-104    2e-100       1     247 []      64     354 ..      64     354 .. 0.94

  Alignments for each domain:
  == domain 1  score: 335.6 bits;  conditional E-value: 5.5e-104
       GCD14   1 gfvyvlaptPeLWtlaLphrtqilytaDisliimkLelkpGsvvvesGtGsgslshaiartvaPtGhlftfefheqraekareefrehel....sqlvt 95 
                 gf+y+l+ptPeLWtlaLphrtqi+yt+Dis+i  kL++ +G++v+e+GtGs+s+sha++rtv+P G+l+++e+h++r+e+a++efr+h++    ++++ 
  EPX70526.1  64 GFIYLLQPTPELWTLALPHRTQIVYTPDISIIFEKLRIVHGTRVIEAGTGSASMSHALSRTVGPSGKLYSYEYHASRYETALQEFRDHNMldevNGNTR 162
                 8****************************************************************************************98775669** PP

       GCD14  96 vthrDvckeGf.deevsgkvDavfLDlPaPweaiphaakal.kkeggrlCsfsPCieqvqrtceaLrelgfteietlevllrtyevrkskleeidlaek 192
                 +thrDvck+Gf  +e s +vDa+fLDlPaPweaiph++k++ ++ ++r+C+fsPC+eq+qr++ aL+++g+++ie+lev ++++++rk+++  +d +++
  EPX70526.1 163 LTHRDVCKDGFeIAESSLEVDAIFLDLPAPWEAIPHLIKHVnRNGSTRICCFSPCMEQIQRSATALQASGWCDIEMLEVSYKQWAARKTRVIRVDDSIE 261
                 ***********7788889***********************777789**************************************************** PP

       GCD14 193 rleenerkriekakrrkaskdakvedkss.ksstevllkPv.....................................selkghtgyLtfatk 247
                 rl+e++r+r+e+++rrk ++  ++e  +s +  +e+   P+                                     s+lk ht+yL+fa++
  EPX70526.1 262 RLKEVKRHRTEGFERRKERQRLEKELAESaENGEETTDSPIsvpseppskapatternhkriregdedyewtdvaridSNLKNHTSYLLFAVH 354
                 *****************97776666544404466777778788889999******************************************86 PP

>> PCMT  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   5.7e-07     0.002      64     124 ..      94     154 ..      82     225 .. 0.85
   2 ?   -2.6   0.1       1.1   3.9e+03      10      31 ..     248     269 ..     242     277 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 5.7e-07
                 HHHHHTT--TT-EEEEES-TTSHHHHHHHHHHCTTCEEEEEESBHHHHHHHHHHHHHCTTC CS
        PCMT  64 lalellelkkgarvLevGsGsGyltavlarlvgekgrvvsierikelveeakrnlkkldle 124
                 ++ e l++ +g+rv+e G+Gs   +  l+r vg++g++ s e+ ++ +e+a ++ + +++ 
  EPX70526.1  94 IIFEKLRIVHGTRVIEAGTGSASMSHALSRTVGPSGKLYSYEYHASRYETALQEFRDHNML 154
                 678999*******************************************999999887764 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.1
                 HHHTTS---HHHHHHHHHS-GG CS
        PCMT  10 lkkkgviksdkvaealeevdRe 31 
                  +k++vi+ d  +e l+ev+R+
  EPX70526.1 248 ARKTRVIRVDDSIERLKEVKRH 269
                 5778888888888888888886 PP

>> GCD14_N  tRNA methyltransferase complex GCD14 subunit N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   8.7e-07    0.0031      20      48 ..      26      54 ..      12      56 .. 0.86

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 8.7e-07
     GCD14_N 20 htitLepGgefhthrGaieHDdlIGrpeG 48
                  +  e+G++fh + Ga+ H ++IG+  G
  EPX70526.1 26 LPLKIEDGQTFHNQYGAFPHSEMIGKRYG 54
                5567899******************9766 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   2.8e-05     0.099       4      53 ..     104     153 ..     101     251 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 2.8e-05
  Methyltransf_31   4 glrvlDlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaqklgl 53 
                      g+rv+++G+G+   +++l +++gp +++++ ++ +   e A ++ ++++ 
       EPX70526.1 104 GTRVIEAGTGSASMSHALSRTVGPSGKLYSYEYHASRYETALQEFRDHNM 153
                      789*********************************99999998888765 PP

>> MAGE_N  Melanoma associated antigen family N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   3.7   0.00011      0.41       5      58 ..     267     320 ..     264     326 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00011
      MAGE_N   5 lrarEkrrqaraetqglegaQataaeeee.stssssplsedtpesspaagtpsap 58 
                  r r ++ + r+e q le + a  ae  e +t s+ +++++ p+++pa+ t +++
  EPX70526.1 267 KRHRTEGFERRKERQRLEKELAESAENGEeTTDSPISVPSEPPSKAPAT-TERNH 320
                 578899999***********99988765548999999999999999988.55554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (367 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       809  (0.0451224); expected 358.6 (0.02)
Passed bias filter:                      524  (0.0292264); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 2543.02
//
Query:       EPX70527.1  [L=444]
Description: Swr1 complex subunit Swc4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.4e-30  103.7   6.9    1.1e-29  102.4   6.9    1.7  1  SANT_DAMP1_like  SANT/Myb-like domain of DAMP1
    6.5e-07   29.4   2.1    6.8e-06   26.1   2.1    2.2  1  DMAP1            DNA methyltransferase 1-associated protein 1
     0.0014   18.8   0.1     0.0051   17.0   0.1    2.1  1  Myb_DNA-bind_6   Myb-like DNA-binding domain
     0.0038   17.4   0.0     0.0038   17.4   0.0    2.1  2  Myb_DNA-binding  Myb-like DNA-binding domain


Domain annotation for each model (and alignments):
>> SANT_DAMP1_like  SANT/Myb-like domain of DAMP1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.4   6.9   2.5e-33   1.1e-29       1      79 [.     100     177 ..     100     178 .. 0.97

  Alignments for each domain:
  == domain 1  score: 102.4 bits;  conditional E-value: 2.5e-33
  SANT_DAMP1_like   1 yaFakfnkkvevpeytdeeYeellkeedWtkeetdyLfdlckeydlrfvviaDryelekkkkrsledlkeryYsvarkl 79 
                      y+F+kfn+ + + +ytd+eY+ell++ dW+keetdyLf+lc+e+dlrf+viaDry++  +k+r+ledlk+r+Y+v+rk+
       EPX70527.1 100 YKFEKFNTVLFIQDYTDDEYRELLEDVDWSKEETDYLFKLCREFDLRFFVIADRYQWV-GKNRTLEDLKDRFYTVSRKI 177
                      89*******************************************************5.99***************997 PP

>> DMAP1  DNA methyltransferase 1-associated protein 1 (DMAP1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   2.1   1.5e-09   6.8e-06       1     146 [.     225     406 ..     225     416 .. 0.71

  Alignments for each domain:
  == domain 1  score: 26.1 bits;  conditional E-value: 1.5e-09
       DMAP1   1 EEemLlaElrkiearkkeRekktqdLqkLitaadkqaea...................rrsekkskkkkleqkkekeksvesetae............. 67 
                 EEe L  El++ie  +       +++ kL+  + ++++                    rr +k +    + +             +             
  EPX70527.1 225 EEEALFIELKRIESLQSKLLSDREEVLKLLDEQKSTEDLrsfhtssgvsgliqdmvnaRRVTKPEDPATNYS-------------Apssgvsssvstpg 310
                 899**********99988888889999999999998777455555555555555544422222221111111.............01112222333456 PP

       DMAP1  68 ...................sagikFpdfkssGvslRsqrmklPasvgqkKlKaieqlleelkvdln.pvpteeivqafNelrsdlvllyelksalatce 146
                                    ++gi + +   sG ++Rsq++  P +v    ++++  +++el+v+ +  +pt ++ +++ el++ +v+l elk  l+   
  EPX70527.1 311 rpfalnalkirygpspndaKSGISWHEKLHSGCFVRSQKV--P-AVKASLVQKVHATMNELGVSSRlIMPTAKVTEKYVELQNTIVVLLELKRQLDRFS 406
                 67888888889999999999******************86..3.3444445558888999999876369***********************9988654 PP

>> Myb_DNA-bind_6  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.1   1.1e-06    0.0051       1      46 [.     128     176 ..     128     205 .. 0.90

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 1.1e-06
  Myb_DNA-bind_6   1 WteeEdeiLlklvekygndWknIaealn....rRtpkqcfdrwknkLrpk 46 
                     W++eE++ L kl++++   +  Ia+ +     +Rt ++++dr+ + ++ k
      EPX70527.1 128 WSKEETDYLFKLCREFDLRFFVIADRYQwvgkNRTLEDLKDRFYT-VSRK 176
                     **************************99999************99.6555 PP

>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   8.5e-07    0.0038       3      44 ..     127     172 ..     125     173 .. 0.94
   2 ?   -3.5   0.6       2.9   1.3e+04       7      15 ..     225     233 ..     224     233 .. 0.84

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 8.5e-07
                      SSBHHHHHHHHHHHHHHTTCHHHHHHHHT....SS-HHHHHHHHHH CS
  Myb_DNA-binding   3 kWteeEdelLleavkkhGnrWkkIaerlg....gRtekqcrsrwrn 44 
                       W++eE + L ++++++  r+  Ia+r++    +Rt ++ ++r+++
       EPX70527.1 127 DWSKEETDYLFKLCREFDLRFFVIADRYQwvgkNRTLEDLKDRFYT 172
                      6****************************88888**********97 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 2.9
                      HHHHHHHHH CS
  Myb_DNA-binding   7 eEdelLlea 15 
                      eE+ l++e+
       EPX70527.1 225 EEEALFIEL 233
                      999999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (444 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       599  (0.0334096); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 3216.08
//
Query:       EPX70528.1  [L=680]
Description: dynamin family protein Vps1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     3e-103  345.0   0.2   1.9e-102  342.3   0.0    2.1  2  Dynamin_M  Dynamin central region
    2.5e-56  190.3   0.1    5.1e-56  189.3   0.1    1.5  1  Dynamin_N  Dynamin family
    3.6e-28   97.5   5.7    9.1e-28   96.3   5.7    1.7  1  GED        Dynamin GTPase effector domain
    4.6e-05   23.5   0.1    0.00015   21.8   0.1    1.9  1  MMR_HSR1   50S ribosome-binding GTPase


Domain annotation for each model (and alignments):
>> Dynamin_M  Dynamin central region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  342.3   0.0  4.3e-106  1.9e-102       1     284 [.     235     519 ..     235     520 .. 0.98
   2 ?   -1.0   1.0      0.18   8.1e+02     194     263 ..     606     672 ..     593     678 .. 0.59

  Alignments for each domain:
  == domain 1  score: 342.3 bits;  conditional E-value: 4.3e-106
   Dynamin_M   1 vvdilenkvipLklGYvgVvnRsqkdInkkksieealkkEkaFFeshpayrkladkaGtpyLakkLnqiLvehIrkslPelkkkineklqklekeleel 99 
                 vvdil+++vipL+lGYv V+nR+qkdI++kksi+ al++E++FFeshp+y++ a+++Gtp+La+kLn iL++hIr++lPe+k +in  l+k+++el++l
  EPX70528.1 235 VVDILAGRVIPLRLGYVPVINRGQKDIEGKKSIRLALDAEREFFESHPSYSTKAQYCGTPFLARKLNMILMHHIRNTLPEIKVRINAALAKYQAELQSL 333
                 79************************************************************************************************* PP

   Dynamin_M 100 geskpsdeektklllqlitkfkedfkklieGese.vstkelsggarireiFnetlekslekidpleelsdeeirtairnsrGrelplfvpekaFealvk 197
                 g+s     + ++++l+lit+f+++f+++++G+se +s  elsggari  +F+e++++ ++ +dp++e++d++irt+++ns+G++++lf+ ++aFe +vk
  EPX70528.1 334 GDSLVG--DSSSIVLNLITDFCNEFRTVLDGNSEdLSITELSGGARIAFVFHEIYSNGIQAVDPFDEVKDTDIRTILYNSSGPSPSLFMGTQAFELIVK 430
                 *97755..89**********************88577************************************************************** PP

   Dynamin_M 198 kqikkleepalkcvelVyeelekivek.lek.elkrFpnLreeikevvedllreqeeptkemienliemelayintnhpdfigalkair 284
                 +qik+le+p++kcv l+++el +i+++ l+k  +krFp+L++e+ +v   +++++++pt  ++++l++me +yint hpdf+++++a++
  EPX70528.1 431 QQIKRLEDPSQKCVSLIFDELVRILNHlLQKpVFKRFPQLKDEFFKVGMGFFKKCMKPTATLVSDLVAMEGSYINTVHPDFLSGHQAMA 519
                 ***************************8888*******************************************************985 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.18
   Dynamin_M 194 alvkkqikkleep..alkcv....elVyeelekiveklekelkrFpnLreeikevvedllreqeeptkemienlie 263
                 ++vk+ ++++ +   +lk++    e +++el + + k     +++ +L ee     +d+  ++++++++m+e+l++
  EPX70528.1 606 NIVKRTLADMVPKsvSLKMIryskEHIQHELLEQIYK----NNSYEKLLEE-----SDITVQRRKECEHMVESLLQ 672
                 5566666665443003444455555555555555555....3456666655.....45666777778888887776 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  189.3   0.1   1.1e-59   5.1e-56       1     168 []      30     226 ..      30     226 .. 0.95

  Alignments for each domain:
  == domain 1  score: 189.3 bits;  conditional E-value: 1.1e-59
                 EEEEEBTTTTHHHHHHHHHTS--S---SSS---S-EEEEECCT---C...............CS...SSEEEE....T-EB--CHHHHHHHHHHHHHHH CS
   Dynamin_N   1 iavvGsqSsGKSSvlnaLlgedilprgpnptTrrplelqlgeeeeas...............eravkeelkek....ekkledfsevreeieketekia 80 
                 i+vvGsqSsGKSSvl++++g+d+lprg++++Trrpl+lql + ++++               +++++ e++e+     +k+++f+++r+ei +ete+++
  EPX70528.1  30 ITVVGSQSSGKSSVLENIVGRDFLPRGTGIVTRRPLVLQLINRPSSEtskgedannslnegaNENNSSEWGEFlhlpGQKIYNFERIRDEIVRETEEKT 128
                 89**************************************555555555666666778888888999999999************************** PP

                 TSSSS--SS-EEEEEEETTS-SEEEEE---B-SSSGTTS.........HHHHHHH.STTEEEEEEEETTS-CCC-CHHHHHHHHSTTBTTEEEEEE-C CS
   Dynamin_N  81 gankgiskkvillkilsllvkgltlvDlPGldsvnkrdq.........elvkeyi.kkadiilavtsanhdlsnsealflarevdpkgkrtivvltkl 168
                 g+n gis+++i l+i+s++v +ltlvDlPGl++v+++dq         e+v +y+ k+++iilav +an+dl+ns+ l+larevdp+g rti+vltk+
  EPX70528.1 129 GKNVGISSVPIYLRIYSPHVLTLTLVDLPGLTKVPVGDQprdiekqirEMVLKYMsKNNAIILAVNAANTDLANSDGLKLAREVDPEGLRTIGVLTKV 226
                 ************************************************************************************************96 PP

>> GED  Dynamin GTPase effector domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.3   5.7     2e-31   9.1e-28       1      91 [.     589     679 ..     589     680 .] 0.98

  Alignments for each domain:
  == domain 1  score: 96.3 bits;  conditional E-value: 2e-31
                 XXXXXTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCCCCHHHCCTTSGGGHHHHT---SCHCCCCHHHHHHHHHHHHHCCCCCH CS
         GED   1 reeseveeirslvksYfnivrktiadqiPkaimhllvneakeslqkellakLykkedldeLLkEdeeiaekRkelkkrlealkkAreilse 91 
                 re++++e+i+ l++sYfniv++t+ad++Pk + + +++++ke++q+ell+++yk++++++LL+E++ ++++Rke+++++e+l +A+ei+s+
  EPX70528.1 589 REKTDTEVIKLLITSYFNIVKRTLADMVPKSVSLKMIRYSKEHIQHELLEQIYKNNSYEKLLEESDITVQRRKECEHMVESLLQASEIVSS 679
                 68999***********************************************************************************986 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.1   3.3e-08   0.00015       2      90 ..      30     200 ..      29     225 .. 0.76

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 3.3e-08
                 EEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEETTEE..................................................... CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvklkgke..................................................... 47 
                 + +vG   +GKS+++  ++g+      +  +Tr +   ++   +++                                                     
  EPX70528.1  30 ITVVGSQSSGKSSVLENIVGRDFLPRGTGIVTRRPLVLQLI--NRPssetskgedannslneganennssewgeflhlpgqkiynferirdeivretee 126
                 889*****************999888899999999777775..2222455666778889999999999******************************* PP

                 ........................EEEEECGGCSS......HHHHHHHHHHHHHH.HHCTSEEEEEEETTTTCS CS
    MMR_HSR1  48 ........................ielvDtpGlie......gaseekglgkafla.leeadlillvvdaseekl 90 
                                         ++lvD+pGl +        + ek++++ +l+ + + ++i+l v+a++++l
  EPX70528.1 127 ktgknvgissvpiylriysphvltLTLVDLPGLTKvpvgdqPRDIEKQIREMVLKyMSKNNAIILAVNAANTDL 200
                 ********************************843333222222222333333332334578888888763433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (680 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       826  (0.0460706); expected 358.6 (0.02)
Passed bias filter:                      619  (0.0345251); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.84u 0.37s 00:00:01.21 Elapsed: 00:00:00.59
# Mc/sec: 3460.93
//
Query:       EPX70529.1  [L=1132]
Description: poly(A) polymerase Cid16 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.3e-09   35.5   3.4      4e-08   33.4   0.0    3.7  4  NTP_transf_2     Nucleotidyltransferase domain
    1.1e-08   35.2   0.1    3.8e-08   33.4   0.1    2.1  1  PAP_assoc        Cid1 family poly A polymerase
  ------ inclusion threshold ------
      0.013   14.5   0.5          5    6.0   0.0    3.1  3  PAP_central      Poly(A) polymerase central domain
      0.014   15.5   0.0      0.056   13.5   0.0    2.1  1  Polbeta          Polymerase beta, Nucleotidyltransferase
      0.024   14.4   0.0        1.7    8.5   0.0    3.0  3  HTH_IclR         IclR helix-turn-helix domain
      0.034   14.4   0.0      0.088   13.1   0.0    1.6  1  tRNA_NucTransf2  tRNA nucleotidyltransferase, second domain
        0.2   11.2   1.3        0.3   10.7   0.1    2.0  2  HTH_24           Winged helix-turn-helix DNA-binding


Domain annotation for each model (and alignments):
>> NTP_transf_2  Nucleotidyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       1.5   3.9e+03      48      74 ..     101     127 ..      84     148 .. 0.70
   2 ?   -1.6   0.1       1.3   3.4e+03      56      87 ..     451     482 ..     436     486 .. 0.80
   3 !   33.4   0.0   1.6e-11     4e-08      13      48 ..     844     895 ..     832     954 .. 0.71
   4 ?   -1.1   0.0      0.94   2.4e+03      67      92 ..    1056    1080 ..    1029    1083 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.5
                   HHHEHHHHHHHHCCCEEECTTEEEEEE CS
  NTP_transf_2  48 kkeegleklaeiikfleellglevdlv 74 
                   + +++++k+++ +kf++e++    dl 
    EPX70529.1 101 ISYVSEQKKKRKPKFWKEINRKLSDLC 127
                   567788899999999999888888876 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.3
                   HHHHCCCEEECTTEEEEEECEEECCCCTEEEE CS
  NTP_transf_2  56 laeiikfleellglevdlvtrekledpllvks 87 
                    +++    + ll++  d+v++ + ed++++k+
    EPX70529.1 451 AVFHGNLRNDLLKYVEDIVFKIPAEDLSRKKK 482
                   5677888899999999***9999998766665 PP

  == domain 3  score: 33.4 bits;  conditional E-value: 1.6e-11
                   T.....TSEEEEEHHHHCTTSCTTSSEEEEEEESTTCHHH...........H CS
  NTP_transf_2  13 p.....vakvvlfGSyarGtalkgSDiDllvvlpeevsre...........k 48 
                   +     +++v++ GS+ +G+++k SD+Dl+v+++++  +             
    EPX70529.1 844 SkklalPVQVHTLGSFKTGLMTKHSDVDLVVTSKKPLIKKynfilklireeY 895
                   223346******************************4322333333222220 PP

  == domain 4  score: -1.1 bits;  conditional E-value: 0.94
                    TTEEEEEECEEECCCCTEEEEEECEE CS
  NTP_transf_2   67 lglevdlvtrekledpllvksileer 92  
                    +++ vd++ +++++ ++ +k + ++r
    EPX70529.1 1056 NQHIVDISYNYPIQ-KKTIKHAIQSR 1080
                    5899*********9.55555555544 PP

>> PAP_assoc  Cid1 family poly A polymerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.4   0.1   1.5e-11   3.8e-08       3      61 ..    1035    1090 ..    1033    1091 .. 0.92

  Alignments for each domain:
  == domain 1  score: 33.4 bits;  conditional E-value: 1.5e-11
                  HHHHHHHHHHHHH....T--TTTEEEECSST-EEEHHHHCGCS-SSEECESSSSEBEETTCCC CS
   PAP_assoc    3 GeLLigFFeyYgr....eFdyenvvisirtggiltkkekgwesaeskernrfllaIeDPfeld 61  
                   +LL+gFF+yYg+     Fd++++++ i+    ++kk++++    +    +++l++ DPf  +
  EPX70529.1 1035 HDLLVGFFRYYGSkendSFDWNQHIVDISYNYPIQKKTIKHA---I----QSRLMVIDPFLKN 1090
                  58****************************************...4....79********765 PP

>> PAP_central  Poly(A) polymerase central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.28   7.2e+02      82      98 ..     726     742 ..     530     777 .. 0.72
   2 ?    6.0   0.0     0.002         5      95     146 ..     936     988 ..     917     996 .. 0.77
   3 ?    4.8   0.1    0.0048        12     189     234 ..    1073    1118 ..    1051    1127 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.28
                  xxxxxxxxxxxxxxxxx RF
  PAP_central  82 vrslnGvRvtdeilrlv 98 
                   +s+nG++ +++il+ +
   EPX70529.1 726 RKSVNGIKSSQQILSFL 742
                  35888888888888765 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.002
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxx RF
  PAP_central  95 lrlvpnketFrlaLraiklWAkrraiysnvlgflgGvawAllva.riCqlyPn 146
                  ++ +   e  ++ + +ik WA+ r+i    + f++  +w ++    + ql P 
   EPX70529.1 936 KTYLDIDERVKVFVSTIKNWASLRMIDKSYFNFPSSYTWCIMALfYVQQLSPP 988
                  5555556666777889************************9964156666665 PP

  == domain 3  score: 4.8 bits;  conditional E-value: 0.0048
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PAP_central  189 nksdrahlmpiitpaypsmnstynvsrstlevlkeelkrgleitee 234 
                    k+  ++++ +i p   ++n t  +s++++++++ e++r+ +i+++
   EPX70529.1 1073 IKHAIQSRLMVIDPFLKNRNLTSVLSSASRKLVQYEMERAYRILTN 1118
                   44555667789*******************************9876 PP

>> Polbeta  Polymerase beta, Nucleotidyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   2.2e-05     0.056      18      51 ..     855     890 ..     837     912 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 2.2e-05
                 EEEEEE-S------EEEEEEEESS-..--HHHHHHH CS
     Polbeta  18 lFGSrakgkareeSDiDlavllkek..ldleeelel 51 
                   GS+ +g ++++SD+Dl v  k+   ++++  l+l
  EPX70529.1 855 TLGSFKTGLMTKHSDVDLVVTSKKPliKKYNFILKL 890
                 45*******************999955444444444 PP

>> HTH_IclR  IclR helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.67   1.7e+03       6      31 ..     679     706 ..     676     707 .. 0.86
   2 ?    8.5   0.0   0.00065       1.7      29      49 ..     749     769 ..     747     771 .. 0.90
   3 ?    2.0   0.0     0.071   1.8e+02      29      40 ..    1028    1039 ..    1026    1043 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.67
                 HHHHCT-CTTBSS..-BHHHHHHHHTS- CS
    HTH_IclR   6 laiLdalaeapqe..ltlselArrtglp 31 
                 l +L++l ++ +e  +++  l ++t+lp
  EPX70529.1 679 LKLLNLLKAEKREkqMSNMPLIKATHLP 706
                 889****999999999999999999988 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.00065
                 TS-HHHHHHHHHHHHHTTSEE CS
    HTH_IclR  29 glpkStvhRlLqtLvelGyve 49 
                  + kS+v R+L  L++lG+++
  EPX70529.1 749 KMEKSSVNRYLEKLEKLGLIT 769
                 588***************986 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.071
                  TS-HHHHHHHHH CS
    HTH_IclR   29 glpkStvhRlLq 40  
                   l+kS+vh lL 
  EPX70529.1 1028 KLNKSSVHDLLV 1039
                  699*******96 PP

>> tRNA_NucTransf2  tRNA nucleotidyltransferase, second domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   3.4e-05     0.088      59      95 ..    1068    1104 ..    1030    1119 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 3.4e-05
                       .....EEE..-SS-EEEETTEEEEETTTTS-HHHHHH CS
  tRNA_NucTransf2   59 eekeallkkfdeplvviDPvDpkRNvaaalsleklae 95  
                        +k+++++++++ l+viDP  ++RN +++ls  +   
       EPX70529.1 1068 IQKKTIKHAIQSRLMVIDPFLKNRNLTSVLSSASRKL 1104
                       233345667799******************9876554 PP

>> HTH_24  Winged helix-turn-helix DNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.3   0.2       5.4   1.4e+04       5      15 ..     678     688 ..     677     690 .. 0.79
   2 ?   10.7   0.1   0.00012       0.3      31      48 .]     752     769 ..     748     769 .. 0.90

  Alignments for each domain:
  == domain 1  score: -4.3 bits;  conditional E-value: 5.4
      HTH_24   5 drkILelLqkn 15 
                  +k+L+lL+++
  EPX70529.1 678 SLKLLNLLKAE 688
                 6899***9876 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00012
      HTH_24  31 pstvnrrlkrLeeeGlIk 48 
                 +s vnr+l++Le+ GlI+
  EPX70529.1 752 KSSVNRYLEKLEKLGLIT 769
                 699*************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1132 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       668  (0.0372581); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.75u 0.29s 00:00:01.04 Elapsed: 00:00:00.46
# Mc/sec: 7446.82
//
Query:       EPX70530.1  [L=1033]
Description: TRAMP complex ATP-dependent RNA helicase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.9e-59  200.2   3.1    5.9e-59  200.2   3.1    1.8  2  rRNA_proc-arch  rRNA-processing arch domain
    2.4e-46  157.4   0.1    6.7e-46  156.0   0.0    1.7  2  DSHCT           DSHCT (NUC185) domain
    6.9e-20   71.5   0.1    7.5e-18   64.9   0.0    2.5  2  DEAD            DEAD/DEAH box helicase
    5.7e-06   26.4   0.1    4.6e-05   23.5   0.0    2.5  3  ResIII          Type III restriction enzyme, res subunit
    2.9e-05   24.4   0.0    0.00029   21.2   0.0    2.7  1  Helicase_C      Helicase conserved C-terminal domain
  ------ inclusion threshold ------
      0.089   11.8   0.0       0.22   10.5   0.0    1.6  1  T2SSE           Type II/IV secretion system protein


Domain annotation for each model (and alignments):
>> rRNA_proc-arch  rRNA-processing arch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.1       2.5   7.6e+03     115     132 ..     335     352 ..     322     374 .. 0.53
   2 !  200.2   3.1     2e-62   5.9e-59       1     269 [.     570     830 ..     570     831 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 2.5
                     EEEEEEEEEEETTS-GGG CS
  rRNA_proc-arch 115 yvVdvllvlsenskrkde 132
                      vV+vl + +e++++ ++
      EPX70530.1 335 KVVEVLQNNVESRENHQS 352
                     455555555555433322 PP

  == domain 2  score: 200.2 bits;  conditional E-value: 2e-62
                     HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHTC--TTHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHGGG--TTEEEEEEETTTEEEEEEEEE CS
  rRNA_proc-arch   1 EyMlerSFsqfqnqkslpelekklkeleeelksitiedeedieeyyklrqqleelreeirkiltkpknilpfLqpGRlvrvksnddldfgwGivl 95 
                     E++l+rSF+qfq+ +s+p l +kl+e + e ksi+i+dee+++ +++l+ qle+++++i + +++p+n+lp+LqpGRl +vk   ++ f wGi++
      EPX70530.1 570 EDLLRRSFYQFQKMESIPLLHRKLDEYKLEEKSIEIKDEESLKRFHELKLQLERYGRDIKHTILEPENSLPYLQPGRLAQVK-IRETLFPWGIIV 663
                     99********************************************************************************.9999******** PP

                     EEEE-SSST.TB-.--TCTTEEEEEEEEEEETTS-GGG--TT--S--TT--B-TT..S-EEEEEEEEEGGGEEEEEEEEE---SSTTSTTHHHHH CS
  rRNA_proc-arch  96 nfkkrnknskeee.asdeesyvVdvllvlsenskrkdedgekseesaeelkPkagdrekgevevvpvplkcieaiSsvrlklpkdlrkseareev 189
                     n +kr    ++++ ++++++yv+d+ll+ls  s       +++ +sa+ + P   ++ek   ev+ v l++ie +S +r+ lpkdl++ e+r+++
      EPX70530.1 664 NSTKR--VVPSSQrVNPQDMYVIDILLPLSSRSTS-----NSNIRSAQLFAP--LPNEKPVYEVIAVFLSSIENFSCLRVLLPKDLSSHESRRST 749
                     *9744..3344455899999*********999754.....345568999999..45788888************************999****** PP

                     HHHHHHHHHHSS.---B--TTTTS----HHHHHHHHHHHHHHHHHHTSGG.GSSSHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  rRNA_proc-arch 190 akavqelkrrfp.giplldpikdmkikdeefkkllkkiealesrlaknpllhspnleelyalyekkvalqeeikelkkeis 269
                      ++v e+++r++  iplldpi++m+ik++++k  ++k+e le ++ ++p +++ +   +y++y++k  l++ ik+l  +is
      EPX70530.1 750 YQNVLEVQKRLNdDIPLLDPIEHMNIKESTLKLHMRKVEILEPKFLESPYYKDASCRTEYHRYTNKLGLKNTIKDLSTKIS 830
                     **************************************************999************************9997 PP

>> DSHCT  DSHCT (NUC185) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.0       3.6   1.1e+04      60      83 ..     405     429 ..     391     444 .. 0.71
   2 !  156.0   0.0   2.2e-49   6.7e-46       2     163 ..     858    1027 ..     857    1028 .. 0.94

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 3.6
       DSHCT  60 pkl.seeleealeelkeiaeriakv 83 
                 + l +e ++ al +l+e++++i ++
  EPX70530.1 405 KDLiNEIIDSALLQLNEEDRKIPQF 429
                 3555777778889999999999866 PP

  == domain 2  score: 156.0 bits;  conditional E-value: 2.2e-49
       DSHCT    2 ntvtlkGrvaaeirsedeLlltellfsgvlddlepeelaAllsalvfeekredeeekepklseeleealeelkeiaeriakvs............ve 86  
                  n++ +kGrva+ei+++deLl+te++f+g++++l+p   aA ls++v++ek++ ++    +l+e  +e+++ + +ia+ri +vs            ++
  EPX70530.1  858 NVIDIKGRVACEISTGDELLITEMIFQGIFNSLSPDIFAATLSCFVYQEKSDVSSL---NLKEPYSETYKAILDIARRIVTVSvesrldvdedeyIN 951 
                  7899**********************************************766544...69999999999999******999999999999999555 PP

       DSHCT   87 srldlglvevvyaWakgasfaellektdldeGdiVRllrrleellrqlakaakvigneeLkkkaeeaielikRdiVf 163 
                   +++++++e+v +W++ga+f e++e+t l+eG+iVR++rrl ell+q ++aa v+gn eL++k     +l+ Rdi+ 
  EPX70530.1  952 -QFKPDMMEAVSKWINGATFLEICEMTRLYEGSIVRTFRRLSELLKQFRNAAAVLGNYELQEKSVVTEQLLYRDIIS 1027
                  .69************************************************************************95 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.9   0.0   2.5e-21   7.5e-18       2     172 ..     132     279 ..     131     282 .. 0.88
   2 ?    4.0   0.0     0.013        39     124     157 ..     319     352 ..     315     370 .. 0.84

  Alignments for each domain:
  == domain 1  score: 64.9 bits;  conditional E-value: 2.5e-21
                 HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCSE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   2 diQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvdi 100
                 + Qa a+ +i + ++vlv+a+T +GKT ++  ++ q++     k++ ++++ +P ++L +q +++l + +      v l++g+v+ +   s        
  EPX70530.1 132 PFQATAVACIERSESVLVSAHTSAGKTVIAEYAIAQSL-----KNKQRVVYTSPIKSLSNQKYRELLSEFGD----VGLLTGDVSINPSASC------- 214
                 68***********************************9.....78999*****************9777774....5577899988655555....... PP

                 EEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 101 vvgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkd 172
                 +v+t++ l ++l +++  +++v ++++DE++ ++d++++  +++ l  l       +   + ++lSATlp+ 
  EPX70530.1 215 LVMTTEILRSMLYKNSELMHEVAWVIFDEIHYMQDKDRGVVWEETLILL-------PDAIRYVFLSATLPNA 279
                 5*********995444459*************************99999.......455779*******954 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.013
                 EEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTST CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 124 flVlDEadrlldqgfsdfinrilnqlpqitcdgk 157
                 ++++DE  r+ +++fs+ ++ + n++++ +++++
  EPX70530.1 319 YMIVDEKNRFKSESFSKVVEVLQNNVESRENHQS 352
                 89*******************9999976666554 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       1.2   3.4e+03     123     157 ..      74     117 ..      24     136 .. 0.58
   2 !   23.5   0.0   1.6e-08   4.6e-05       9     169 ..     135     276 ..     110     278 .. 0.82
   3 ?   -1.4   0.0       0.7   2.1e+03     135     160 ..     319     343 ..     306     347 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 1.2
                 ....HHHTTT-SEEEEETGGGTTS..T........TTHHHHHT- CS
      ResIII 123 eeseellrdrfdviiiDEaHrlgak.k........swreilekf 157
                  +++  +++ +  i+ DE H  + + +        ++r+i e++
  EPX70530.1  74 LQTNFEEEGVQRGIFHDERHDRSFAlHkvvvppdyNYRSIEEHV 117
                 23333333444478899999776654145555566777777766 PP

  == domain 2  score: 23.5 bits;  conditional E-value: 1.6e-08
                 HHHHHHHT......TTSEEEEEESTTSTHHHHH.HHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--.......-SE CS
      ResIII   9 eeaienlleklkskrdkrglikmaTGtGKTlva.aklierllkkgkeekflflvprkslleqtleefkkflseaykeigkkvsgdkkkakekdstnkki 106
                 ++a+  +      +r + +l+ + T +GKT++a ++++++l++k   ++++   p ksl +q ++e+ + + +      + ++gd  ++      +++ 
  EPX70530.1 135 ATAVACI------ERSESVLVSAHTSAGKTVIAeYAIAQSLKNK---QRVVYTSPIKSLSNQKYRELLSEFGDV-----GLLTGDVSIN-----PSASC 214
                 3333333......68899***************77777777776...589999********9999999999875.....7899999888.....8999* PP

                 EEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS.T...TTHH.HHHT---SEEEEEESS- CS
      ResIII 107 lvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgakk...swre.ilekfkeavllglTATp 169
                 lv+t++ l + +     ++++ l ++   +i+DE H +++k+    w+e ++   ++   + l+AT+
  EPX70530.1 215 LVMTTEILRSML-----YKNSELMHEVAWVIFDEIHYMQDKDrgvVWEEtLILLPDAIRYVFLSATL 276
                 ************.....99999999999************757789999434444667778888887 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 0.7
                 EEEEETGGGTTS.TTTHHHHHT---S CS
      ResIII 135 viiiDEaHrlgakkswreilekfkea 160
                 ++i+DE  r+++ +s+ +++e ++++
  EPX70530.1 319 YMIVDEKNRFKS-ESFSKVVEVLQNN 343
                 89**********.8888888877765 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   9.6e-08   0.00029      43     111 .]     440     516 ..     360     516 .. 0.72

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 9.6e-08
                 EEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSS.........SSHHHHHHHHTTSSSTT CS
  Helicase_C  43 vavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlp.........rnvtsyiqriGRtgRag 111
                 +  +h+ l    +e +   f++g +++L at   + G+++p +++V + +++          +  +y+q++GR+gR g
  EPX70530.1 440 IGFHHSGLLPIMKELVEILFQEGLVRILFATETFAIGLNMP-ARTVLFTNAQkfsgtnfrwLSSGEYMQMSGRAGRRG 516
                 334566666666667777789999****************9.8889988888776655554446************75 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   7.5e-05      0.22     124     161 ..     139     176 ..     113     179 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 7.5e-05
       T2SSE 124 kavrerglilvsGgTgsGKttll.yallkeinksderiv 161
                 + +++  ++lvs  T+ GKt+++ ya+ + ++++ +r+v
  EPX70530.1 139 ACIERSESVLVSAHTSAGKTVIAeYAIAQSLKNK-QRVV 176
                 45677899**************978888888888.6665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1033 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       810  (0.0451782); expected 358.6 (0.02)
Passed bias filter:                      532  (0.0296726); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.73u 0.31s 00:00:01.04 Elapsed: 00:00:00.44
# Mc/sec: 7058.70
//
Query:       EPX70531.1  [L=212]
Description: RAD51D-like protein 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       447  (0.0249317); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1530.30
//
Query:       EPX70532.1  [L=593]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      5e-19   67.3  27.5    4.1e-09   35.6   1.0    4.3  4  zf-RanBP  Zn-finger in Ran binding protein and others
    6.9e-07   29.0   0.0    1.4e-06   28.0   0.0    1.6  1  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom


Domain annotation for each model (and alignments):
>> zf-RanBP  Zn-finger in Ran binding protein and others
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.2     0.041   3.6e+02      17      24 ..      47      54 ..      46      56 .. 0.80
   2 !   35.6   1.0   4.6e-13   4.1e-09       1      29 [.     335     363 ..     335     364 .. 0.95
   3 !   28.1   4.3   9.9e-11   8.8e-07       1      28 [.     436     465 ..     436     466 .. 0.97
   4 !   16.7   2.3   3.7e-07    0.0033       3      28 ..     551     575 ..     550     577 .. 0.91

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.041
                SSSB-TTT CS
    zf-RanBP 17 wstkCvaC 24
                ++++C++C
  EPX70532.1 47 EKQHCESC 54
                67899999 PP

  == domain 2  score: 35.6 bits;  conditional E-value: 4.6e-13
                 GSSSEE-SSS--EEESSSSB-TTT--BTS CS
    zf-RanBP   1 regdWdCskClvqNfawstkCvaCqapkp 29 
                 r gdW+C+ C+++Nf+ ++ C++C++p p
  EPX70532.1 335 RPGDWNCPMCGFSNFQRRVSCFRCSFPGP 363
                 78************************987 PP

  == domain 3  score: 28.1 bits;  conditional E-value: 9.9e-11
                 GSSSEE-..SSS--EEESSSSB-TTT--BT CS
    zf-RanBP   1 regdWdC..skClvqNfawstkCvaCqapk 28 
                 r+gdW+C    C+++Nfa+++ C++C+a++
  EPX70532.1 436 RAGDWKCgsEGCGYHNFAKNVCCLRCGASR 465
                 89**************************87 PP

  == domain 4  score: 16.7 bits;  conditional E-value: 3.7e-07
                 SSEE-SSS--EEESSSSB-TTT--BT CS
    zf-RanBP   3 gdWdCskClvqNfawstkCvaCqapk 28 
                 gdW C  C++ Nf  ++ C++C ap 
  EPX70532.1 551 GDWLC-ECGFTNFRRRNNCLRCNAPH 575
                 89***.6*****************95 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   0.0   1.6e-10   1.4e-06       3      67 ..     240     305 ..     238     308 .. 0.92

  Alignments for each domain:
  == domain 1  score: 28.0 bits;  conditional E-value: 1.6e-10
                 EESETTTSSHHHHHHHHHTTSCE.EEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTE CS
       RRM_1   3 VgnLppdvteeeLkelFskfGpi.ksiklvrd.etgkskgfafVeFeskedAekAlealngkklggr 67 
                 +++L++dvt++eL+ +F + G     +   ++ e  ks+g++++ F ++edA +Al  lng  +g+r
  EPX70532.1 240 ISGLTNDVTQSELEGWFTNHGIHpIALWTLKTpEPYKSTGTGYILFGNHEDASDALG-LNGSCIGDR 305
                 89******************9886788888889************************.******998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (593 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       539  (0.030063); expected 358.6 (0.02)
Passed bias filter:                      326  (0.0181828); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 4176.22
//
Query:       EPX70533.1  [L=356]
Description: rRNA processing protein Ebp2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-79  267.3  23.1    1.6e-79  267.3  23.1    2.0  2  Ebp2      Eukaryotic rRNA processing protein EBP2


Domain annotation for each model (and alignments):
>> Ebp2  Eukaryotic rRNA processing protein EBP2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -9.8  18.7         1   1.8e+04     135     213 ..       6      85 ..       2      98 .. 0.48
   2 !  267.3  23.1   8.8e-84   1.6e-79       1     268 []      98     351 ..      96     351 .. 0.93

  Alignments for each domain:
  == domain 1  score: -9.8 bits;  conditional E-value: 1
        Ebp2 135 arkqRelkkfgKqvqveklqeRqkeKketlekikklkkkrkkldfle....eeeedefdvaleealkkkkkkkkkkkkgkknk 213
                 a+  + +kk  K  q  k++  +++K+e+++++ +    + +l++ +    e+ e++ + +++e+l k ++ +++++k k n+
  EPX70533.1   6 AKGRKSQKKNMKAAQ--KKKAVAENKQEAVSNVDTKENSSASLKN-SieseEKPEEQDETEVQEQLPKVNEPNQQDEKPKDNQ 85 
                 555666777777766..4444456667777777654443322222.1234333444445666666633333333333333332 PP

  == domain 2  score: 267.3 bits;  conditional E-value: 8.8e-84
        Ebp2   1 eedeelsalekgelkegedvvpekkkkltinnkeaLkekleeikl.kklpwvetldltsk.paeiedvedDlkRElaFykqaleavkearkrlkklgvp 97 
                 e+++els+le  el+e++d+v +  +kl+ nn+ aL++++e+ik  +++++ve++++t++ p+ +e+vedDl+RElaFykq++e+vk+a  +l+k++vp
  EPX70533.1  98 EDEVELSDLEGVELEEDADLVRK--RKLALNNTIALESIYEKIKYpDNISFVENQAITTNePVVVENVEDDLTRELAFYKQGVESVKAAFVQLEKHKVP 194
                 57899**************9999..999*******************************9899999********************************* PP

        Ebp2  98 fkRPeDYFAEMvKsDehMekvkekLleeqaakkaseearkqRelkkfgKqvqveklqeRqkeKketlekikklkkkrkkldfleeeeedefdvaleeal 196
                 ++RP+DYFAEM+KsD+hMekv+++L++e+++kk se+a+kqRelkkfgKqvq +k++eRq++Kk+tleki+ lk+k++ +d    ++ed+fdv+l +a+
  EPX70533.1 195 ITRPSDYFAEMLKSDAHMEKVRQELIKEATSKKLSEQAKKQRELKKFGKQVQLAKQEERQRSKKDTLEKINLLKRKSSGSDL---TTEDDFDVTLANAE 290
                 ***************************************************************************9999875...567*******9998 PP

        Ebp2 197 kkkkkkkkkkkkgkknkkrkakdkKfGfGGkkrgsKsndaessadvsgfsakkkkkkkgkkkkkkRpgksrR 268
                          k++++k++ +k k++KfGfGG+k+g Ksnda+s a  ++f +k+  k+  kk++k+Rpgk+rR
  EPX70533.1 291 ---------KEEKSKQSTKKTKNEKFGFGGRKHGRKSNDADSLA-ATEFGKKG-LKALYKKGNKSRPGKARR 351
                 .........122223345789**********************8.56788888.46788999*********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3043  (0.169725); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                       135  (0.0075297); expected 17.9 (0.001)
Passed Fwd filter:                        45  (0.0025099); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.99u 0.35s 00:00:01.34 Elapsed: 00:00:00.50
# Mc/sec: 2139.01
//
Query:       EPX70534.1  [L=590]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.6e-31  108.2   0.5    3.4e-29  101.8   0.1    3.0  2  DUF4211   Domain of unknown function (DUF4211)


Domain annotation for each model (and alignments):
>> DUF4211  Domain of unknown function (DUF4211)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.8   0.1   1.9e-33   3.4e-29       1     144 []     353     486 ..     353     486 .. 0.92
   2 !    3.2   0.0    0.0046        82      65      93 ..     538     566 ..     517     575 .. 0.83

  Alignments for each domain:
  == domain 1  score: 101.8 bits;  conditional E-value: 1.9e-33
     DUF4211   1 dFivededeelgapdeeeeedelplefsskahkdlkehFkdvvewlvsnaldpdfllafeerkdelylvalkklddevegladslvsssaWkpefkkaL 99 
                 +Fiv++e+e    ++ + ++  lp efs+++h+ l+ hF +++ + +++ ++ +    +e + d+++l ++k++++++ +  +s+v+ss Wkp f++ L
  EPX70534.1 353 SFIVDEEEE----EEVMGARALLPPEFSMTSHQGLRAHFANFLRYHIKQLMNLQ----TEINIDDHLLFSCKTIRRRLFSSVESNVISSIWKPSFISIL 443
                 59*888763....333444578*******************************9....556779*********************************** PP

     DUF4211 100 earPelditeleaseekkCdAcnrskhpatysvrlsGkpYnkktl 144
                 ++rP+++ +++ea+   +CdAcn +++ +t  vr++G++Y+++t+
  EPX70534.1 444 KNRPSMTNRRCEAT--YGCDACNIHSRLSTQLVRFKGHLYDRDTY 486
                 *************9..8*************************996 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.0046
     DUF4211  65 elylvalkklddevegladslvsssaWkp 93 
                  +++ +++ ld+++++l ++++  s W++
  EPX70534.1 538 GYFEAPVQFLDQMYHALEENNYPESSWQE 566
                 799************************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (590 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1773  (0.0988901); expected 358.6 (0.02)
Passed bias filter:                      347  (0.0193541); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.75u 0.29s 00:00:01.04 Elapsed: 00:00:00.49
# Mc/sec: 3618.09
//
Query:       EPX70535.1  [L=121]
Description: signal recognition particle subunit Srp21 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-19   70.2   0.2    1.5e-19   70.2   0.2    2.5  2  SRP9-21   Signal recognition particle 9 kDa protein (SRP9)


Domain annotation for each model (and alignments):
>> SRP9-21  Signal recognition particle 9 kDa protein (SRP9)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.2   0.2   8.3e-24   1.5e-19       2      95 ..       5      76 ..       4      78 .. 0.93
   2 ?   -1.8   0.7      0.23   4.2e+03      44      47 ..     111     114 ..      95     121 .] 0.44

  Alignments for each domain:
  == domain 1  score: 70.2 bits;  conditional E-value: 8.3e-24
     SRP9-21  2 ktsqefleqsslLlearPsttrittkYsikakkkkkkkkkkkaksekkaskaspprgtltlKtydpvsGvclkYkTnkaaevsRlisalgrlgr 95
                +++++f+eq+ lL+ea+P+tt+itt+Y+i++                      ++++ l+ K+y+ +sG+clk++T+kaae+sRl+ + ++lg+
  EPX70535.1  5 SNVNDFFEQARLLIEAYPDTTKITTRYRIDE----------------------DQQSYLVAKAYETTSGICLKFRTDKAAELSRLMLIASKLGH 76
                7899**************************2......................24789******************************999996 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.23
     SRP9-21  44 akse 47 
                 ++s+
  EPX70535.1 111 KSSK 114
                 1111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       661  (0.0368676); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.37s 00:00:00.92 Elapsed: 00:00:00.56
# Mc/sec: 650.91
//
Query:       EPX70536.1  [L=326]
Description: coenzyme A transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.3e-58  194.9   3.0    4.1e-22   77.9   0.1    3.2  3  Mito_carr        Mitochondrial carrier protein
    0.00063   19.8   0.1       0.15   12.2   0.0    2.4  2  PT-VENN          Pre-toxin domain with VENN motif
  ------ inclusion threshold ------
      0.012   14.8   0.0        4.2    6.4   0.0    2.5  2  Serine_protease  Gammaproteobacterial serine protease


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.9   0.1   6.8e-26   4.1e-22       5      95 ..      17     109 ..      13     111 .. 0.94
   2 !   54.7   0.0   1.2e-18   6.9e-15       6      94 ..     117     217 ..     113     219 .. 0.94
   3 !   61.1   0.4   1.2e-20   7.1e-17       2      93 ..     233     323 ..     232     325 .. 0.95

  Alignments for each domain:
  == domain 1  score: 77.9 bits;  conditional E-value: 6.8e-26
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS..HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   5 vlkellaGglagavatlvttPldvvKtrlqtqkksskksksaa..ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                 ++k+ +aGg+ag+va++ ++Pld+vK+  qt+ + ++   +++  + + +k+iy+  G+rgl++G +++l rv+p++++kfv+ye+++rll +
  EPX70536.1  17 LIKSGIAGGFAGCVAKTTIAPLDRVKILYQTNHEAYRGYAFSRhgLTKSIKRIYRISGVRGLFQGHTATLYRVFPYAGIKFVAYEQVRRLLIR 109
                 56889******************************9998887789*********************************************986 PP

  == domain 2  score: 54.7 bits;  conditional E-value: 1.2e-18
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHG...............GGTTHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   6 lkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrg...............lyrGllpnllrvapasalkfvlyetl 89 
                  +++l+G+lag++++++t+Pl+++++rl    +s++k k   +l+v ++i++e  + +               +yrG++++l++++p++++ f++ +  
  EPX70536.1 117 GRRFLSGSLAGICSVCFTYPLELIRVRLAYITGSNNKPK---LLNVTGQILHERDFGSlkenpiitsirrlsnFYRGFSVTLMGIFPYAGMSFLAHDLA 212
                 589********************************9988...*********9999999999**********************************9999 PP

                 HHHHC CS
   Mito_carr  90 krlll 94 
                  +++ 
  EPX70536.1 213 TDFFH 217
                 88876 PP

  == domain 3  score: 61.1 bits;  conditional E-value: 1.2e-20
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   2 elsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                 +ls++++l aG+lag++++++ +P++v + ++q+ + +s+++  + + +v+k++y++ Glrg+y Gl++  l+++p  +  f++y   k +l
  EPX70536.1 233 HLSTWSQLTAGALAGVCGQTISYPFEVCRRKMQIGGVESRSRFLK-LQNVVKSTYRDAGLRGFYVGLTIGYLKMIPMVSTSFFIYTRSKAYL 323
                 5789**********************************9998766.***************************************9999876 PP

>> PT-VENN  Pre-toxin domain with VENN motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.1   0.0    0.0039        23      16      32 ..      20      36 ..      14      38 .. 0.88
   2 !   12.2   0.0   2.5e-05      0.15       5      31 ..     227     253 ..     227     255 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0039
     PT-VENN 16 stlaaGlaGgvvggtla 32
                s +a+G aG v++ t+a
  EPX70536.1 20 SGIAGGFAGCVAKTTIA 36
                89**********98876 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 2.5e-05
     PT-VENN   5 teeEKqtvsalstlaaGlaGgvvggtl 31 
                 +e++ +++s+ s+l aG+ +gv g t+
  EPX70536.1 227 SEKDERHLSTWSQLTAGALAGVCGQTI 253
                 5777789*****************875 PP

>> Serine_protease  Gammaproteobacterial serine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0   0.00095       5.7     172     202 ..     115     145 ..      91     187 .. 0.77
   2 ?    6.4   0.0    0.0007       4.2     175     196 ..     238     259 ..     231     300 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.00095
  Serine_protease 172 elynkllaGalsGviAtvlttifnsykDkkl 202
                      ++ +++l+G l+G+   ++t+++ + + +  
       EPX70536.1 115 TNGRRFLSGSLAGICSVCFTYPLELIRVRLA 145
                      45689*****************998776654 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0007
  Serine_protease 175 nkllaGalsGviAtvlttifns 196
                       +l+aGal+Gv   +++++f  
       EPX70536.1 238 SQLTAGALAGVCGQTISYPFEV 259
                      689****************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (326 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       369  (0.0205812); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.28s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 2206.07
//
Query:       EPX70537.1  [L=218]
Description: GTPase Ras1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.9e-59  199.3   0.1    3.4e-59  199.0   0.1    1.1  1  Ras          Ras family
    8.3e-22   77.7   0.0    1.2e-21   77.1   0.0    1.3  1  Roc          Ras of Complex, Roc, domain of DAPkinase
    3.9e-09   36.2   0.0    4.5e-09   36.0   0.0    1.1  1  Arf          ADP-ribosylation factor family
    1.9e-06   27.6   0.1    1.4e-05   24.7   0.1    2.0  1  GTP_EFTU     Elongation factor Tu GTP binding domain
     0.0001   22.3   0.0    0.00017   21.7   0.0    1.3  1  MMR_HSR1     50S ribosome-binding GTPase
    0.00049   20.0   0.1       0.25   11.2   0.0    2.6  2  RsgA_GTPase  RsgA GTPase
  ------ inclusion threshold ------
      0.054   12.8   0.0        0.1   11.9   0.0    1.4  1  Septin       Septin


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  199.0   0.1   1.3e-62   3.4e-59       1     161 [.      10     170 ..      10     171 .. 0.99

  Alignments for each domain:
  == domain 1  score: 199.0 bits;  conditional E-value: 1.3e-62
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeikr 99 
                 Klv+vGd++vGK++l+++ ++++F +ey++Ti +d+y+k++e+dg+ + l+++DTAGqee++++re+y+r++eg+llvy+itsr+sf+++++++++i r
  EPX70537.1  10 KLVVVGDGGVGKSALTIQLIQSHFVDEYDPTI-EDSYRKKCEIDGEGALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEINTFYQQILR 107
                 99******************************.****************************************************************** PP

                 HST.TTSEEEEEEETTTGGGG-SS-HHHHHHHHHHHTSEEEEEBTTTTCTHHHHHHHHHHHHH CS
         Ras 100 vae.envpivLvGnKvDleekravsteegeelakelglkfletSAktnenveeafeellreil 161
                 v++ +++p+vLv+nK+Dle++r+vs++ege+la+++++ ++etSAk + nveeaf++l+r+i+
  EPX70537.1 108 VKDkDSFPVVLVANKCDLESERVVSRAEGEALARSMKCIYVETSAKLRLNVEEAFYSLVRTIR 170
                 **9889******************************************************986 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.1   0.0   4.8e-25   1.2e-21       1     120 []      10     125 ..      10     125 .. 0.88

  Alignments for each domain:
  == domain 1  score: 77.1 bits;  conditional E-value: 4.8e-25
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE..GH.HHHCHH CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd..sr.ssenlk 96 
                 K+v+vGd+gvGK+ l  ++++++f +++++ti  ++ + ++ +i+g       +   l++ DtaGqe+++++++ y+r  + ++lvy+  sr s+++++
  EPX70537.1  10 KLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRK-KC-EIDG-------EGALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYNitSRsSFDEIN 99 
                 99*******************************99865.56.5666.......3468******************************96633256899* PP

                 HHHHHHHHHCSSS..-EEEEEE-TTT CS
         Roc  97 eWlkelkkvagks..pvilvgnkiDl 120
                 + ++++ +v +k+  pv+lv+nk+Dl
  EPX70537.1 100 TFYQQILRVKDKDsfPVVLVANKCDL 125
                 ******9998876579********95 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.0   0.0   1.8e-12   4.5e-09      12     172 ..       6     166 ..       1     169 [. 0.79

  Alignments for each domain:
  == domain 1  score: 36.0 bits;  conditional E-value: 1.8e-12
                 TTEEEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSSEEEE...EEEETTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHHHHH CS
         Arf  12 kkelrilllGLDnaGKtTilkklkleelvt.tvPTigfnve...eleiknlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLka 106
                  +e++++++G  + GK+ +  +l + ++v+   PTi    +   e+  ++  + v D  Gqe+   + ++Y+++ ++ + v   + r+ ++e ++  ++
  EPX70537.1   6 LREYKLVVVGDGGVGKSALTIQLIQSHFVDeYDPTIEDSYRkkcEIDGEGALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEINTFYQQ 104
                 589****************99998888765389***8765422246668999*********************************************** PP

                 HCTSGCCTTSEEEEEEE-TTSTTSS-HHHHHHHTTGGGSSSSSSEEEEEEBTTTTBTHHHHHHHHH CS
         Arf 107 lleeeelkevallvlaNKqDlpealseeelrellgleelkgkrkleiqkcsavkgeglkeglewls 172
                 +l+ ++  + +++++aNK Dl++    +  +     e l  + k   +++sa  + +++e++  l+
  EPX70537.1 105 ILRVKDKDSFPVVLVANKCDLESERVVSRAE----GEALARSMKCIYVETSAKLRLNVEEAFYSLV 166
                 ********************98654333332....2233333444445566666666666666555 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.1   5.6e-09   1.4e-05      65     140 ..      51     131 ..       7     198 .. 0.80

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 5.6e-09
                 TTCSSEEEEEEEESSSGGGHHHHHHHHHT-SEEEEEEETT.....TBSTHHHHHHHHHHHHTTTEEEEEEESCGSTHHHHH CS
    GTP_EFTU  65 ketkkylinliDtPGHvdFskevirglrvlDgavlvvdav.....eGvepqteevlrlalkegvpiivfiNKmDrlkaelk 140
                  +++  l+ ++Dt G +++s   ++ +r+ +g +lv  ++     + +++  +++lr+  k   p++++ NK+D   +++ 
  EPX70537.1  51 IDGEGALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYNITsrssfDEINTFYQQILRVKDKDSFPVVLVANKCDLESERVV 131
                 3689999*******************************99666666699999**********************9844433 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   6.5e-08   0.00017       2     114 .]      11     122 ..      10     122 .. 0.72

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 6.5e-08
                 EEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEETT..EEEEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEETT.....TTCSHHH CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvklkg..keielvDtpGliegaseekglgkaflaleeadlillvvdas.....eeklkpl 93 
                  ++vG   vGKS L  +l+++   v ++  t  d  +++ +++g    + ++Dt+G  e   e   +++++ +  e   +llv +++     + +++  
  EPX70537.1  11 LVVVGDGGVGKSALTIQLIQS-HFVDEYDPTIEDSYRKKCEIDGegALLDVLDTAG-QE---EYSAMREQYMRTGE--GFLLVYNITsrssfD-EINTF 101
                 689****************97.558888888888888888866644789*******.55...44489999998777..455555444333322.34444 PP

                 HHHHHHHHHHTTSEEEEEEES CS
    MMR_HSR1  94 deeleelleeakkplilvlnk 114
                  +++ ++++++  p++lv+nk
  EPX70537.1 102 YQQILRVKDKDSFPVVLVANK 122
                 466666666677789999998 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0   9.7e-05      0.25      96     122 ..       5      31 ..       3      47 .. 0.84
   2 !    6.1   0.0    0.0037       9.5      36      85 ..     103     151 ..      84     172 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 9.7e-05
                  HCTTSEEEEECSTTSSHHHHHHHHCTT CS
  RsgA_GTPase  96 llkdktsvlvGqSGvGKStLinallpe 122
                  +l++   v+vG  GvGKS+L  +l+++
   EPX70537.1   5 YLREYKLVVVGDGGVGKSALTIQLIQS 31 
                  67788899************9888764 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0037
                  HHHHHHHHHTT-EEEEEEE-GGG--HHHHHHHHHHHHHHTTSEEEE--TT CS
  RsgA_GTPase  36 drfLvlaeekgiepvivlnKiDlleeeeeleelkeelealgyevllvsak 85 
                  +++L +  +   ++v+v nK+Dl +e+  +++ + e  a  +++++v+++
   EPX70537.1 103 QQILRVKDKDSFPVVLVANKCDLESERV-VSRAEGEALARSMKCIYVETS 151
                  5666677778889*************99.555544444444555544433 PP

>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   3.9e-05       0.1       5      52 ..       9      55 ..       7      69 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 3.9e-05
                EEEEEEEBTTSSCCCCCCTTSSSS------------------S-EEEE CS
      Septin  5 ftlmvvGesglGkttlintlfetdlieeekleeasekkkktveikkkk 52
                + l+vvG+ g+Gk++l   l++++ ++e   ++ +++ +k+ ei+ + 
  EPX70537.1  9 YKLVVVGDGGVGKSALTIQLIQSHFVDEY-DPTIEDSYRKKCEIDGEG 55
                689*********************99995.555667888888887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       694  (0.0387082); expected 358.6 (0.02)
Passed bias filter:                      488  (0.0272185); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 1552.10
//
Query:       EPX70538.1  [L=1078]
Description: damaged DNA binding protein Ddb1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.8e-78  262.1   2.7    8.8e-78  262.1   2.7    1.8  2  MMS1_N    Mono-functional DNA-alkylating methyl methanesulfon
      9e-60  202.7   1.9    1.4e-57  195.5   0.1    3.2  3  CPSF_A    CPSF A subunit region


Domain annotation for each model (and alignments):
>> MMS1_N  Mono-functional DNA-alkylating methyl methanesulfonate N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  262.1   2.7   9.8e-82   8.8e-78       1     488 [.      74     538 ..      74     539 .. 0.88
   2 ?   -2.9   0.1      0.22     2e+03     377     421 ..     553     597 ..     542     604 .. 0.68

  Alignments for each domain:
  == domain 1  score: 262.1 bits;  conditional E-value: 9.8e-82
      MMS1_N   1 DlLvvgsdsgelvflsynpeknqfetvhshetlgksgsrrsqpGqylavDPkgraiavsayekvflvyslkk..keilnrealll.ssplearksegvi 96 
                 D++++++ds++++++ +++e++ + +  + ++ + ++ r+sq+G  l+vDP +r++ +++y++ ++++++ +  k+ ln + + + ++ +++r+ e+++
  EPX70538.1  74 DHIIIATDSFHYFTIFWDSENQTIANGMKIQDCSVRSLRESQSGPLLLVDPFQRVVCLHIYQGLLTIIPIINskKRRLN-STDGFlHDNFNVRIKELDV 171
                 9*******************999999888****************************************9995544455.555555899********** PP

      MMS1_N  97 lsmvFldpgykeednpiialleqdrrgkteltlyewdlglnlvrkisktsepkknldsganlLiplpkpggvlVcgetiitykdildqedirkk..... 190
                 ++++ l++++     p++a+l+ d++  ++l +y+++  +  ++ ++ +       d +   Li+  + ggv+V ge ++ y  + +  + +k+     
  EPX70538.1 172 VDICMLHTPS----VPTLAVLYRDSKSVVHLSTYTINVRECEIDEDNLY--C---HDIEEGKLIAHSN-GGVFVFGEMYVYYISK-E-LKASKSllsyp 258
                 **********....6***********************99988886665..3...5667779******.*************888.3.22344434444 PP

      MMS1_N 191 .......swarPrrekatnfvawekldsfffllatedGdLylleiekdedsgkvvtsislkyfdtvsvasalvilksgfLfvasefGdgqlyqiearge 282
                         ++ P++          k+d  +f++ +e G +y    e+++d      ++ l+++++ s+a+++v l  + +f++s++Gd+ ++q+++ g 
  EPX70538.1 259 isaftgvLVSDPLEDL-----FSIKYDPNHFFVTDESGLIYHFYSEFSQD----GLKMDLEKLGESSIATCMVSLPHNKVFLGSHYGDSAVLQLDNPGL 348
                 4444444333444443.....4459999*****************99877....689**************************************9876 PP

      MMS1_N 283 dd..knleliqtldNlaPilDfkvvkesdlasegqdqiytcsGagkrgsLrelRsGieveelavseepgspitgvWtlklssedeyddylvlSfvneTl 379
                  +   n++++q ++N+aPi Df +v    +++++   i tcsGa+k+gsLr+l++ +++++++++e +  +i+ v++++     +yd+y+++Sf++eT+
  EPX70538.1 349 ANqgLNIQTLQVFPNIAPISDF-IV----EHESSGSSIITCSGAYKDGSLRVLKNTVPIQDVGIIEMD--SIKEVFSVSF--HADYDNYIIISFPSETR 438
                 55779*****************.55....4667788***************************99544..589****995..678************** PP

      MMS1_N 380 vlsidgdgeveevtedsglllsvpTLaagnlgd.gslvQVtpngirliradkrvsewkppngksiiaaaangeqllvalsgrelvyfeldlieevekkd 477
                 vl+++++ge+   +    l+ +++TL +g +++ ++++QVt +g rl+++ k + +w+p+   +i++  +++++++val+g++l+ +++  +ee+++ +
  EPX70538.1 439 VLHVSSEGEFSICD---ELSCDSSTLSVGIVDEgNQILQVTASGLRLFDGMKLM-SWSPEA--NITSGNMYKNLVCVALTGGTLIFLRM--LEEIARFQ 529
                 *****997755555...9**************6488***************877.8****7..8*************************..9999**** PP

      MMS1_N 478 leslsevscls 488
                 ++   e+scl+
  EPX70538.1 530 CN--AEISCLD 538
                 **..*****98 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.22
      MMS1_N 377 eTlvlsidgdgeveevtedsglllsvpTLaagnlgdgs..lvQVtpn 421
                 + lvl+i g++++++++ +  l    ++La+ + ++++  ++ Vt+n
  EPX70538.1 553 SILVLRI-GQENIQQLC-QFELKDVPRSLACFSFSNQVndFLYVTTN 597
                 3468888.775677776.44777777899999999844448888876 PP

>> CPSF_A  CPSF A subunit region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0     0.022     2e+02      96     163 ..      22      95 ..       9     110 .. 0.77
   2 !    3.4   0.0    0.0044        39     165     260 ..     522     601 ..     517     606 .. 0.79
   3 !  195.5   0.1   1.5e-61   1.4e-57       1     319 [.     740    1037 ..     740    1040 .. 0.94

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.022
                 EEEETTEEEEE-SSEEEEEEE-TTS-EEEEEEEE-SS-EEEEEEE.......TTEEEEEESSS-EEEEEE-SSS- CS
      CPSF_A  96 laefqGrllvgvgqkvrvydlgedktLlrkafldtqlyvvslkvl.......gnriivgDlmkSvtfveydeeny 163
                 +  ++  ++++  ++v +y++ ++++L    f+++   +v lk++        ++ii+ D+++ +t + +d+en+
  EPX70538.1  22 VDSVSCNVIIAKTNCVEIYEYSDENNLQLITFTNIFGRIVGLKAFrpalsstDHIIIATDSFHYFT-IFWDSENQ 95 
                 5556667899999999******99999999999666699999999666655444999999998666.45777777 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.0044
                 EEEEEEESS---EEEEEEE--SSSEEEEEETTSEEEEEE--TTSGGGTTTT.EEEEEEEEE-SS----E...EEEE.SSS--S-EEEEEE-TTS-E CS
      CPSF_A 165 lilfardtqkrwvtaaeflvdgedtvlvaDkfgnlfvlrydpeasessdgdprleeraefhlgeivtslrkgslvpgeaesssspqllyatldGsi 260
                 l ++ar   + ++ +++fl d+ +t  ++  + +++vlr+ +e          +++ ++f l +++ sl  +s+  +      +  l ++t+dG++
  EPX70538.1 522 LEEIARFQCNAEISCLDFL-DD-STCFIGLWSSSILVLRIGQE---------NIQQLCQFELKDVPRSLACFSFSNQV-----NDFLYVTTNDGQF 601
                 56677777788999*****.99.799999999********963.........6889999*****99999555554443.....3458888999986 PP

  == domain 3  score: 195.5 bits;  conditional E-value: 1.5e-61
                  B-EEEEE-T..TT-EEEEE--TTEEEEEEEE--B-SSTTT---B--EEEEEEE---SSS--E.EEEEEEEEEE-SS--EEEEEEEEEEEES----EE CS
      CPSF_A    1 assiklvdpiskeeidsleLeenEavlsvksvelessettkekkellvVGtafnlgedpaarsGrilvfeiievpetnrkLklvhkeevkgavtala 97  
                  +ss++++d+ + eei ++ +++nE+v+s++++e +         + +vVGt++n++++ ++ sGr+l+f+i+++     +L lv+  +v+g+v+ l 
  EPX70538.1  740 KSSLRVFDKLTLEEICHFVFDQNEMVESIIYLETS---------SNVVVGTGYNYPDQDTPDSGRLLMFTIDKD-----NLDLVTTYKVQGSVNTLR 822 
                  699****************************9964.........349**************************6.....9***************** PP

                  EETTEEEEE-SSEEEEEEE-TTS-EEEEEEEE-SS-EEEEEEETTEEEEEESSS-EEEEEE-SSS--EEEEEEESS---EEEEEEE--SSSEEEEEE CS
      CPSF_A   98 efqGrllvgvgqkvrvydlgedktLlrkafldtqlyvvslkvlgnriivgDlmkSvtfveydeenyklilfardtqkrwvtaaeflvdgedtvlvaD 194 
                   ++G +++g++ +v v+ + e + +  +  l+t++y+++l v  n i+vgDlmkS+++++y+e  + l+++ard+++ wv ++e l +  + + v+D
  EPX70538.1  823 SYNGLIIAGINATVSVFVVREGS-FHVEGCLRTPTYTIDLCVDDNDIVVGDLMKSISVINYSE-SQ-LSELARDFKPIWVSSVEKL-ER-HKYFVCD 914 
                  ***********************.*************************************77.56.9******************.77.89***** PP

                  TTSEEEEEE--TTSGGGTTTT.EEEEEEEEE-SS----E...EEEE.SSS--S-EEEEEE-TTS-EEEEEE.--HHHHHHHHHHHHHHHHHS--SSS CS
      CPSF_A  195 kfgnlfvlrydpeasessdgdprleeraefhlgeivtslrkgslvpgeaesssspqllyatldGsigllvPliseeeyrrlqaLqqqLrkelkhlgG 291 
                  ++gn f+l +d + ++ +d + rl++  +++lge+v++ r   l    + s++ p+l+ +t+dG+i+ lv+    +  + l +Lq++ r+ l++ gG
  EPX70538.1  915 ADGNAFILLRDVHSPQIADRK-RLRRLDQYFLGEFVNKTRVAALRNPLEGSFVHPKLISVTVDGAIM-LVG-DAHDYADILLQLQDNVRRALPSTGG 1008
                  ***********8888888888.*****************888887765666679*************.***.99*********************** PP

                  --HHHHS---..----..---EEHHHHHH CS
      CPSF_A  292 ldhrafRsyyspksee.vkgviDgdller 319 
                  l+h+ +R+++s+++e+ +  +iDg+lle 
  EPX70538.1 1009 LSHEVWRKCHSEVAEDlPSKLIDGNLLEG 1037
                  **********9866667**********95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1078 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       483  (0.0269396); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.74u 0.29s 00:00:01.03 Elapsed: 00:00:00.46
# Mc/sec: 7074.31
//
Query:       EPX70539.1  [L=141]
Description: cofilin/tropomyosin family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-20   73.5   0.4    1.5e-20   73.2   0.4    1.1  1  Cofilin_ADF    Cofilin/tropomyosin-type actin-binding protein
  ------ inclusion threshold ------
      0.019   15.1   0.0      0.035   14.3   0.0    1.5  1  Ribosomal_L50  Ribosomal subunit 39S


Domain annotation for each model (and alignments):
>> Cofilin_ADF  Cofilin/tropomyosin-type actin-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.2   0.4   1.7e-24   1.5e-20      15     120 ..      31     138 ..      14     138 .. 0.89

  Alignments for each domain:
  == domain 1  score: 73.2 bits;  conditional E-value: 1.7e-24
                  SEEEEEEECTTTEEEEEESS-...HHHHHHHHHHTTT-EEEEEEEEEECCSECCEEEEEEEEE--TTS-HHHHHHHHHHHHHHHHHCTTSEEEEEE-C CS
  Cofilin_ADF  15 kyilfkidddkeeivveeege...tyeelreelpeseprYavydveyehddeskrsklvfIswvPdsapikqkmlyasskdalkkelkgisveieatd 109
                   + +fkid+ ++e+v++ e     ++ee+++el+e++prY+++++  ++ d++ +++l++I+w P s+p    m+yas k  ++++  ++++ +e+++
   EPX70539.1  31 FAYIFKIDKSTKEVVPDGEIMqieSVEEIADELSETQPRYILVSYPTKTTDGRLNTPLFMIYWRPTSSPHDLSMIYASAKVWFQDKS-QVHKVMEVRE 127
                  4679*************933356699*****************************************9******************9.89988***** PP

                  GGCCSHHHHHH CS
  Cofilin_ADF 110 ldelteeelke 120
                   +++t ++++e
   EPX70539.1 128 IEDITTDAVEE 138
                  ******99875 PP

>> Ribosomal_L50  Ribosomal subunit 39S
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   3.9e-06     0.035      39      80 ..      28      68 ..       4      83 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 3.9e-06
  Ribosomal_L50 39 elKFaflkrlqqllgheipDykltklhtvkdlveyleevvnp 80
                   +l Fa++ ++ ++++  +pD+++ ++++v+++ ++l   ++p
     EPX70539.1 28 SLLFAYIFKIDKSTKEVVPDGEIMQIESVEEIADEL-SETQP 68
                   667*********************************.44444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       512  (0.0285571); expected 358.6 (0.02)
Passed bias filter:                      348  (0.0194099); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1092.42
//
Query:       EPX70540.1  [L=265]
Description: NADH-cytochrome reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.2e-09   36.1   0.0      1e-08   35.4   0.0    1.3  1  FAD_binding_6  Oxidoreductase FAD-binding domain
     0.0015   19.2   0.0       0.05   14.3   0.0    2.3  1  NAD_binding_1  Oxidoreductase NAD-binding domain


Domain annotation for each model (and alignments):
>> FAD_binding_6  Oxidoreductase FAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.4   0.0   1.2e-12     1e-08       2      95 ..      44     134 ..      43     137 .. 0.83

  Alignments for each domain:
  == domain 1  score: 35.4 bits;  conditional E-value: 1.2e-12
                    EEEEEEEECCTTEEEEEEEESTTTS----.-TT-EEEEEECETTCCEEEEEE.BSSTTECCEEEEEEE--TT-HHHHHHHCS-TT-EEEEEEEE- CS
  FAD_binding_6   2 lkltekeevsedtrifrfklpsekqklgl.pvGqhvflrlkikgeaviRsYtpissenekGelellvkvypgGkmsqaLdelkigdtleikGPlG 95 
                    +++++ ++v++d +if+++ + + ++++   + +   ++++ ++ +v R+Ytp+  +++  ++++ +++y++G +s+++++ k gdt+e++GP+ 
     EPX70540.1  44 FTISQITKVTPDASIFTLTPQGSLENMKNmDPIS--KVTIRNPDMQVQRPYTPLYINED--NFKFYIRNYEDGPVSSHIHSKKEGDTVELRGPFK 134
                    678999************9998888776413333..4666666999******9987665..6889****************************85 PP

>> NAD_binding_1  Oxidoreductase NAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   5.5e-06      0.05       3     105 ..     150     234 ..     149     238 .. 0.65

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 5.5e-06
                    EEGGGGHHHHHHHHHHHHHCTTCSEEEEEEEESSGCGSTTHHHHHHHHHHCTTEEEEEEEESSCTTTSSSEESSHHHHHHHHHHHHSSTTEEEEEE CS
  NAD_binding_1   3 agGtGiaPvrsvlraileeakdktkvvlvyGnrteedllyreeleelakklpgrlkvvavvsreeagweggkgrvqdalleellslkkeethvyvC 98 
                     +GtGiaP++++ ++       k +v +vy+ r  ++ +++e+le+   + p+ ++v ++++r  a         +d l  + ++++++et+ ++C
     EPX70540.1 150 VAGTGIAPIYQLAQN------SKVPVDIVYCERPGQEPALKEQLEK---ECPN-VRVRTIQDRLIAA--------DDILKWDGVDVPLSETLCIIC 227
                    58********98764......456899**********999988765...4555.4444443333332........233333444556666666667 PP

                    CSHHHHH CS
  NAD_binding_1  99 GppgMik 105
                    G+p++++
     EPX70540.1 228 GNPKFVA 234
                    6666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (265 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       516  (0.0287802); expected 358.6 (0.02)
Passed bias filter:                      497  (0.0277205); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.22s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 2021.49
//
Query:       EPX70541.1  [L=394]
Description: glutamate 5-kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.8e-38  132.5   0.7    3.1e-38  131.7   0.6    1.4  1  AA_kinase  Amino acid kinase family
    8.3e-15   54.5   0.4    2.3e-14   53.1   0.1    1.9  2  PUA        PUA domain


Domain annotation for each model (and alignments):
>> AA_kinase  Amino acid kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.7   0.6   3.5e-42   3.1e-38       2     239 ..      13     240 ..      12     242 .. 0.93

  Alignments for each domain:
  == domain 1  score: 131.7 bits;  conditional E-value: 3.5e-42
                 EEEEEE-TTCCCCTCC.....HHHHHHHHHHHHHHHHTTEEEEEE--HHHHHHHHHHTCCCCCHHHC....E..HHHHHHHHHHHHHHHHHHHHHHHHH CS
   AA_kinase   2 rvVvKlGGssltdkee.....aslrrlaeqiaalkesgnklvvVhGggsftdgllalksglssgelaaglrstleeagevatrdalaslgerlvaalla 95 
                 ++V+KlG ss+ d+++     ++l  ++e + +l++ g+++v+V++g +++ gl +l  +l++++++            +   +a+a++g+  + +l++
  EPX70541.1  13 TIVIKLGTSSICDEKThepliSNLSLIVETVVKLRKLGHNVVLVSSG-GIAMGLRRL--DLPKRPSK------------LSAVQAIAAVGQGRLISLWD 96 
                 69**********88888******************************.999999999..99999998............5666**************** PP

                 TTHGEEEE-GGGTCEECCCE..HHHTTTCEEECCHHHHHHHTT-EEEEESEEEEETTTEEEEE-HHHHHHHHHHHCTSSEEEEEESSSSCESSTTTTCC CS
   AA_kinase  96 aglpavglsaaaldateagrdegsdgnvesvdaeaieelleagvvpvltgfigldeegelgrgssDtiaallAealgAdkliiltdVdGVydadpkkvp 194
                 +++++   + a++++t++++     ++ + + a++i ell+ gvvp+++++++l++++   +g++Dt++a+ A +++Ad+l +ltdV+  ++a+p+ +p
  EPX70541.1  97 NLFSQLRQPIAQILITRNDI---AERTQYVNAANTISELLHLGVVPIVNENDTLSVQEIR-FGDNDTLSAITAGMINADYLFLLTDVECMFTANPRTNP 191
                 ********************...9999******************************997.9************************************* PP

                 TTCECCEE.EHHHCHH....CSSS.TTTHHHHCHHHHHHHHHCTT-EEEE CS
   AA_kinase 195 darllpei.svdeaee....saselatgGmkvkhpaalaaarrggipvvI 239
                 da++++ + + +++ +      s+ +tgGmk+k+ aa     +g ++vvI
  EPX70541.1 192 DAKPIRMVqDTSSVIAdvssPGSNVGTGGMKTKLIAAELGTSSG-VNVVI 240
                 ********86666666799999************9997777766.77776 PP

>> PUA  PUA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.55   4.9e+03      54      65 ..     258     269 ..     256     270 .. 0.82
   2 !   53.1   0.1   2.6e-18   2.3e-14       1      73 [.     298     371 ..     298     372 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.55
                 S-HHHHHHHCTS CS
         PUA  54 ysseelakikgg 65 
                  s+e+l+ki+g+
  EPX70541.1 258 SSAEDLEKIEGL 269
                 589******986 PP

  == domain 2  score: 53.1 bits;  conditional E-value: 2.6e-18
                 CEEEE-HHHHHHHHT..T-EEEGGGEEEEETT--TTSEEEEEETTSCEEEEEEESS-HHHHHHHCTSEEEEEEEE CS
         PUA   1 grvvvddgAvkalls..gasLlapGvvevegdfeegdvVaivdedgelvavGlanysseelakikggksveierv 73 
                 g + +d+gA  a+++  +a Ll+ Gv++v+g+f + + V i  + + +++++l+nyss e++ ikg++s ei ++
  EPX70541.1 298 GSLEIDEGAHVAITRtnRAGLLPVGVTNVNGHFAAHQAVNITFK-DAVIGRALVNYSSTEIELIKGKRSNEIGNI 371
                 5789************9***********************9988.*************************99776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (394 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       417  (0.0232584); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2917.40
//
Query:       EPX70542.1  [L=363]
Description: protein disulfide isomerase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.2e-57  190.5   0.0    1.5e-29  102.0   0.1    2.3  2  Thioredoxin     Thioredoxin
    6.5e-21   75.0   1.9    7.2e-21   74.9   0.5    1.8  1  ERp29           Endoplasmic reticulum protein ERp29, C-termin
    4.5e-13   49.2   0.0    1.8e-05   24.3   0.0    2.1  2  OST3_OST6       OST3 / OST6 family, transporter family
    5.7e-11   42.8   1.2    0.00036   20.9   0.1    3.6  2  Thioredoxin_2   Thioredoxin-like domain
    2.5e-10   40.3   0.2    6.1e-05   22.9   0.0    2.7  3  AhpC-TSA        AhpC/TSA family
    2.1e-09   37.6   0.7     0.0016   18.7   0.1    3.9  4  Thioredoxin_8   Thioredoxin-like
    7.1e-07   29.3   0.0      0.013   15.7   0.0    2.7  2  Thioredoxin_7   Thioredoxin-like
    3.6e-06   27.0   2.1     0.0063   16.4   0.1    3.4  3  Thioredoxin_6   Thioredoxin-like domain
    1.6e-05   24.7   0.0       0.02   14.6   0.1    2.4  2  Redoxin         Redoxin
    8.9e-05   23.1   0.1      0.019   15.7   0.0    3.4  3  DnaI_N          Primosomal protein DnaI N-terminus
    0.00025   21.0   0.0       0.28   11.0   0.0    2.5  2  TraF            F plasmid transfer operon protein
     0.0043   17.1   0.0       0.42   10.7   0.0    2.8  2  Thioredoxin_3   Thioredoxin domain
  ------ inclusion threshold ------
      0.035   13.9   0.2        3.4    7.5   0.0    2.7  3  Thioredoxin_9   Thioredoxin
      0.041   13.7   0.1       0.08   12.8   0.1    1.4  1  Activator-TraM  Transcriptional activator TraM
      0.064   13.6   0.0         17    5.9   0.0    2.4  2  DDE_Tnp_1_2     Transposase DDE domain
      0.092   12.5   0.3        6.2    6.5   0.0    3.1  3  DSBA            DSBA-like thioredoxin domain
       0.11   12.5   0.0        3.7    7.5   0.0    2.8  3  HyaE            Hydrogenase-1 expression protein HyaE
       0.13   12.4   2.2        2.9    8.0   0.1    2.9  3  Thioredoxin_4   Thioredoxin


Domain annotation for each model (and alignments):
>> Thioredoxin  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.3   0.0   1.2e-27   1.2e-24      11     102 ..      32     126 ..      24     127 .. 0.92
   2 !  102.0   0.1   1.5e-32   1.5e-29       2     102 ..     143     247 ..     142     248 .. 0.97

  Alignments for each domain:
  == domain 1  score: 86.3 bits;  conditional E-value: 1.2e-27
                  HHHHTTTSSEEEEEEE-TTSHHHHCHHHHHHHHHHHCTT..TSEEEEEETTTSHHHHHHTT-SSSSEEEEEE.TTEEEEEEESS-HHHHHHHHHH CS
  Thioredoxin  11 eeevakekklvlveFyApwCghCkalaPeleklaeelkd..kvklakvdvdenedlakkyevegiPtlklfk.ngkevkkyegarekeklaaflk 102
                  e+ ++++kk  l+eFyA+wCghCk+laP++e+l +++ d  ++ + kvd+d+  ++ kky+++g+Ptl+ f+ +g  + +y+ ar+ ++l +f++
   EPX70542.1  32 EDGIRSAKKGALIEFYATWCGHCKNLAPVYEELGQTFDDnkDILIGKVDADTFGEVGKKYQIRGFPTLIWFPpDGSDPVQYSHARDLNSLTQFVS 126
                  66788899******************************999**************************997762677***************9986 PP

  == domain 2  score: 102.0 bits;  conditional E-value: 1.5e-32
                  EEESSHHHHHHHHTTTSSEEEEEEE-TTSHHHHCHHHHHHHHHHHCTT..TSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTE..EEEEEESS-HHH CS
  Thioredoxin   2 vlvltkenFeeevakekklvlveFyApwCghCkalaPeleklaeelkd..kvklakvdvdenedlakkyevegiPtlklfkngk..evkkyegareke 95 
                  v++l+++nF+e v+++ k+vlveFyA+wCg Ck+l+P++ekla+ +k+  +vk+ k+++d  +d+  k++v ++Pt+klf++g+  e++ y+g r+ e
   EPX70542.1 143 VIELESANFDEIVMDDTKDVLVEFYADWCGYCKRLTPTYEKLAKVFKNepNVKVTKINADVYADVGMKHQVASFPTIKLFRKGHkdEPDAYNGDRSLE 240
                  78899******************************************************************************98999********** PP

                  HHHHHHH CS
  Thioredoxin  96 klaaflk 102
                  +l ++l+
   EPX70542.1 241 SLTDYLN 247
                  **99987 PP

>> ERp29  Endoplasmic reticulum protein ERp29, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.9   0.5   7.2e-24   7.2e-21       1      96 []     265     355 ..     265     355 .. 0.98

  Alignments for each domain:
  == domain 1  score: 74.9 bits;  conditional E-value: 7.2e-24
       ERp29   1 GrieeldelaaefvaaakaereelleeakkaaeklksekekkaaeyYvkvmekiaekgeeyvekElkRLekllkkgklaaekkdelkkrlNILsaF 96 
                 Gri+ lde+a+ef+++++a+re +le++k+   + +    +++ +yY +v+ek ++++ ++v+kE kRL+k+l+++++a +++d++k rlNIL++F
  EPX70542.1 265 GRIPILDEFASEFMDNSRAAREVVLEKVKQFTLENS----SRWTQYYRNVFEKTLKDE-NWVTKEAKRLSKILRQKSIALANADDFKARLNILRSF 355
                 99***************************9998888....9*****************.************************************9 PP

>> OST3_OST6  OST3 / OST6 family, transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.3   0.0   1.8e-08   1.8e-05      46     140 ..      51     132 ..      46     136 .. 0.89
   2 !   23.7   0.0   2.6e-08   2.6e-05       5     138 ..     133     251 ..     131     259 .. 0.83

  Alignments for each domain:
  == domain 1  score: 24.3 bits;  conditional E-value: 1.8e-08
   OST3_OST6  46 CelCrefepefelvakswrkdekskskklfFakvdfdegkdvFqklglnsaPhlllfppkkgpkeskkkdtydfsrggfdaealakfisertgvk 140
                 C  C++++p +e + + ++ +     k+++ +kvd d   +v +k++++  P l+ fpp +  +   ++ +y       d ++l +f+se+tgvk
  EPX70542.1  51 CGHCKNLAPVYEELGQTFDDN-----KDILIGKVDADTFGEVGKKYQIRGFPTLIWFPPDG--S---DPVQYSHA---RDLNSLTQFVSEKTGVK 132
                 99*****************99.....69*******************************44..3...67888765...48999*********954 PP

  == domain 2  score: 23.7 bits;  conditional E-value: 2.6e-08
   OST3_OST6   5 klakks..ngviklndenykellkgprdysvvvllTatspqfkCelCrefepefelvakswrkdekskskklfFakvdfdegkdvFqklglnsaPhlll 101
                 kl+k+   n vi+l+++n++e++  +    v+v + a      C  C+ + p +e++ak +++++     ++   k++ d   dv +k ++ s P + l
  EPX70542.1 133 KLKKSAvpNDVIELESANFDEIVM-DDTKDVLVEFYAD----WCGYCKRLTPTYEKLAKVFKNEP-----NVKVTKINADVYADVGMKHQVASFPTIKL 221
                 4444445679*************6.6777899999998....7********************93.....88889999999****************** PP

   OST3_OST6 102 fppkkgpkeskkkdtydfsrggfdaealakfisertg 138
                 f   + ++   ++d y+   g+ + e+l ++++e+tg
  EPX70542.1 222 FRKGH-KD---EPDAYN---GDRSLESLTDYLNEKTG 251
                 *9933.33...455555...56799999999999998 PP

>> Thioredoxin_2  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.1   2.7e-06    0.0026       3      89 ..      37     104 ..      35     113 .. 0.81
   2 !   20.9   0.1   3.6e-07   0.00036       4     107 ..     158     244 ..     155     246 .. 0.71

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 2.7e-06
  Thioredoxin_2   3 gngkpvlvvftdpdCpyCkklkkelkelddvtvrvllfplkpsfepkavaiwcakekkkafkdieenvelarkygvrgtPtivfldg 89 
                    + +k  l+ f++++C+ Ck l  + +el    ++     ++++ ++ + +++ ++             e+++ky++rg+Pt++ +++
     EPX70542.1  37 SAKKGALIEFYATWCGHCKNLAPVYEEL---GQT-----FDDNKDILIGKVDADTFG-----------EVGKKYQIRGFPTLIWFPP 104
                    6789999********************9...444.....788877777777777776...........6************774444 PP

  == domain 2  score: 20.9 bits;  conditional E-value: 3.6e-07
  Thioredoxin_2   4 ngkpvlvvftdpdCpyCkklkkelkelddvtvrvllfplkpsfepkavaiwcakekkkafkdieenvelarkygvrgtPtiv.fldgk.eivarlp 97 
                    + k vlv f++++C+yCk+l  + ++l +v        +k++ + k+++i  +            + +++ k++v ++Pti  f  g   + + + 
     EPX70542.1 158 DTKDVLVEFYADWCGYCKRLTPTYEKLAKV--------FKNEPNVKVTKINADV-----------YADVGMKHQVASFPTIKlFRKGHkDEPDAYN 234
                    5799***********************666........5666333333333333...........45689999*******9845555577777777 PP

  Thioredoxin_2  98 Gyvpaeelea 107
                    G  + e l++
     EPX70542.1 235 GDRSLESLTD 244
                    7766666665 PP

>> AhpC-TSA  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.0   3.5e-05     0.035      25      59 ..      39      72 ..      25      84 .. 0.83
   2 ?   -2.1   0.0       3.3   3.3e+03      22      52 ..      92     122 ..      79     131 .. 0.68
   3 !   22.9   0.0   6.1e-08   6.1e-05       8      71 ..     144     205 ..     137     218 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 3.5e-05
                TSEEEEEEESTST-CCHHHHHHHHHHCHHHCCCTT CS
    AhpC-TSA 25 gkpvvlffypkdwcpvCttelpalaklyeefkerg 59
                +k +++ fy++ wc +C++ +p +++l + f++++
  EPX70542.1 39 KKGALIEFYAT-WCGHCKNLAPVYEELGQTFDDNK 72
                4789*******.*******************9653 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 3.3
                 HHTTSEEEEEEESTST-CCHHHHHHHHHHCH CS
    AhpC-TSA  22 dykgkpvvlffypkdwcpvCttelpalakly 52 
                 +++g p+++ f p  + pv + ++++l+ l 
  EPX70542.1  92 QIRGFPTLIWFPPDGSDPVQYSHARDLNSLT 122
                 3477777888888777777777777777765 PP

  == domain 3  score: 22.9 bits;  conditional E-value: 6.1e-08
                 -EEESTTCEEEECHHHTTSEEEEEEESTST-CCHHHHHHHHHHCHHHCC.CTTEEEEEEESSSCH CS
    AhpC-TSA   8 felknadgetvslsdykgkpvvlffypkdwcpvCttelpalaklyeefk.ergvevigvsvdspe 71 
                 +el+ a+++++ ++d k+  v++ fy+  wc +C++  p ++kl++ fk e +v+v  +++d  +
  EPX70542.1 144 IELESANFDEIVMDDTKD--VLVEFYAD-WCGYCKRLTPTYEKLAKVFKnEPNVKVTKINADVYA 205
                 577888899999999999..9999**99.********************555********99755 PP

>> Thioredoxin_8  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.0   0.00088      0.88       5      35 ..      43      73 ..      40      83 .. 0.84
   2 ?    5.7   0.0     0.019        19      59      93 ..      72     106 ..      67     107 .. 0.80
   3 !   18.7   0.1   1.6e-06    0.0016       4      48 ..     162     206 ..     159     228 .. 0.88
   4 ?   -2.2   0.0       5.3   5.3e+03      60      63 ..     302     305 ..     273     331 .. 0.58

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00088
                   EEEE--SSSHHHHHHHHHHHHHHHHHHHTTS CS
  Thioredoxin_8  5 lLyfgaswcppckaftpklkelyeklkkkkk 35
                   l+ f+a+wc +ck+  p   el +++ ++k+
     EPX70542.1 43 LIEFYATWCGHCKNLAPVYEELGQTFDDNKD 73
                   5679******************999986544 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.019
                    TTSEE.EE-TT-HHHHTT-S--TT-SEEEEE-TT- CS
  Thioredoxin_8  59 kpwlsvpfddkkrnklkkkynvkaiPtlvvldkng 93 
                    k+ l   +d +   ++ kky++ ++Ptl++  ++g
     EPX70542.1  72 KDILIGKVDADTFGEVGKKYQIRGFPTLIWFPPDG 106
                    55566667778889999*************99988 PP

  == domain 3  score: 18.7 bits;  conditional E-value: 1.6e-06
                    EEEEE--SSSHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-SS-HH CS
  Thioredoxin_8   4 vlLyfgaswcppckaftpklkelyeklkkkkkveivyvsldkkee 48 
                    vl+ f+a+wc  ck+ tp+  +l + +k++++v++  ++ d   +
     EPX70542.1 162 VLVEFYADWCGYCKRLTPTYEKLAKVFKNEPNVKVTKINADVYAD 206
                    8999************************9******9999997654 PP

  == domain 4  score: -2.2 bits;  conditional E-value: 5.3
                    TSEE CS
  Thioredoxin_8  60 pwls 63 
                     w+ 
     EPX70542.1 302 RWTQ 305
                    3333 PP

>> Thioredoxin_7  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   0.0   0.00039      0.39      14      36 ..      36      58 ..      28     104 .. 0.88
   2 !   15.7   0.0   1.3e-05     0.013      16      35 ..     158     177 ..     153     200 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00039
                   HHHT--EEEEE--TT-HHHHHHH CS
  Thioredoxin_7 14 aergkpvlvffgaswcftCqale 36
                   ++ +k  l+ f a+wc++C+ l+
     EPX70542.1 36 RSAKKGALIEFYATWCGHCKNLA 58
                   6778999************9875 PP

  == domain 2  score: 15.7 bits;  conditional E-value: 1.3e-05
                    HT--EEEEE--TT-HHHHHH CS
  Thioredoxin_7  16 rgkpvlvffgaswcftCqal 35 
                    + k+vlv f a+wc++C++l
     EPX70542.1 158 DTKDVLVEFYADWCGYCKRL 177
                    5799**************98 PP

>> Thioredoxin_6  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.1   6.3e-06    0.0063      31     138 ..      85     204 ..      56     213 .. 0.71
   2 !    8.3   0.2     0.002         2      10      74 ..     179     249 ..     174     250 .. 0.72
   3 ?    2.2   0.1      0.15   1.5e+02     107     145 ..     301     352 ..     282     359 .. 0.64

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 6.3e-06
                    HHHHHHTT--S.SEEEEEETTTTEEEEEETHT--HHHHHHHHHHH-.........--S.EEE-SHHHHHHHHTSS--EEEEEEE-TTSTTHHHHHH CS
  Thioredoxin_6  31 kevadklgvke.pavllfrkfdeekvkydgekitvddlkkfiekns.........lpl.vreltpenaeelfeeglppllllflkkddeeteklkk 115
                    +ev +k+++++ p++++f ++ + +v+y+++  + ++l++f++++          +p+ v el + n++e+  ++ + +l+ f+       + l  
     EPX70542.1  85 GEVGKKYQIRGfPTLIWFPPDGSDPVQYSHA-RDLNSLTQFVSEKTgvkklkksaVPNdVIELESANFDEIVMDDTKDVLVEFYADWCGYCKRLTP 179
                    457889************************9.7999999998765322222222277789999999999999888888888888532222366666 PP

                    HHHHHHHHTTT..T-EEEEEETTGG CS
  Thioredoxin_6 116 aiekvakefkd..kinfaladaksf 138
                    ++ek+ak fk+  ++++  ++a+ +
     EPX70542.1 180 TYEKLAKVFKNepNVKVTKINADVY 204
                    7888888888834477777777754 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.002
                    HHHHHHTTT-T.T..SEEEEE--HHHHHH.....TT--SSEEEEEET.TTTEEEEEETHT--HHHHHHHHHHH CS
  Thioredoxin_6  10 eiFekvakelkgd..vrfgvtkskevadk.....lgvkepavllfrk.fdeekvkydgekitvddlkkfiekn 74 
                     ++ek ak +k++  v +  + +++v+ +       +++p+++lfrk   +e+  y+g+  + ++l++ ++++
     EPX70542.1 179 PTYEKLAKVFKNEpnVKVTKI-NADVYADvgmkhQVASFPTIKLFRKgHKDEPDAYNGD-RSLESLTDYLNEK 249
                    578899999998854444444.46666666766455566*******9444589999998.7999999888765 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.15
                    STTHHHHHHHHHHHHHHT..............TTT-EEEEEETTGGHHHHHHT CS
  Thioredoxin_6 107 deeteklkkaiekvakef..............kdkinfaladaksfkrpleyl 145
                    + +t+++++++ek  k++              ++k  +ala+a++fk  l+ l
     EPX70542.1 301 SRWTQYYRNVFEKTLKDEnwvtkeakrlskilRQK-SIALANADDFKARLNIL 352
                    44555555555555555545544444444442444.89999999999988865 PP

>> Redoxin  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.0    0.0029       2.9      28      57 ..      39      68 ..      28      95 .. 0.76
   2 !   14.6   0.1     2e-05      0.02      28      70 ..     159     201 ..     135     215 .. 0.80

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0029
                TSEEEEEEESTTT-HHHHHTHHHHHTH.HHH CS
     Redoxin 28 gkkvvvnfvpgafcPtCsaehpylekl.ael 57
                +k +++ f+++ +c+ C++ +p  e+l +++
  EPX70542.1 39 KKGALIEFYAT-WCGHCKNLAPVYEELgQTF 68
                56689******.*******999555552555 PP

  == domain 2  score: 14.6 bits;  conditional E-value: 2e-05
                 TSEEEEEEESTTT-HHHHHTHHHHHTH.HHHHHCSTTTEEEEEE CS
     Redoxin  28 gkkvvvnfvpgafcPtCsaehpylekl.aellkekgvdvvavva 70 
                  k v+v f++  +c++C++ +p  ekl + +++e +v+v  ++a
  EPX70542.1 159 TKDVLVEFYAD-WCGYCKRLTPTYEKLaKVFKNEPNVKVTKINA 201
                 57899999999.**********6666626666666777665655 PP

>> DnaI_N  Primosomal protein DnaI N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0      0.21   2.1e+02      51      69 ..     115     133 ..     110     148 .. 0.81
   2 !   15.7   0.0   1.9e-05     0.019      24      69 ..     209     254 ..     180     269 .. 0.91
   3 ?    0.1   0.0       1.3   1.3e+03      12      32 ..     298     318 ..     285     357 .. 0.75

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.21
                 HHTHHHHHHHHHS-SS-TT CS
      DnaI_N  51 erslskLyeyveekkkcea 69 
                  r+l+ L ++v+ek  +++
  EPX70542.1 115 ARDLNSLTQFVSEKTGVKK 133
                 6899**********99998 PP

  == domain 2  score: 15.7 bits;  conditional E-value: 1.9e-05
                 HHHHHTTXHHHHHHHHHSTTTC-HHHHHHTHHHHHHHHHS-SS-TT CS
      DnaI_N  24 lkeevlsdpeVqaFlqehqeelteeaierslskLyeyveekkkcea 69 
                 +k++v s p ++ F + h++e +    +rsl  L +y++ek  c++
  EPX70542.1 209 MKHQVASFPTIKLFRKGHKDEPDAYNGDRSLESLTDYLNEKTGCQR 254
                 899*****************************************98 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 1.3
                 SXXXHHHHHHHHHHHHHTTXH CS
      DnaI_N  12 lkkrkfekryeklkeevlsdp 32 
                  +++++ + y++++e++l+d+
  EPX70542.1 298 ENSSRWTQYYRNVFEKTLKDE 318
                 356667777888888887776 PP

>> TraF  F plasmid transfer operon protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.0   0.00028      0.28     127     158 ..      37      68 ..      29     111 .. 0.79
   2 !    7.4   0.0    0.0035       3.5     133     200 ..     163     223 ..     155     230 .. 0.66

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00028
        TraF 127 lakeygLlfFyrgkcpyceaqapilqafadky 158
                  ak+ +L+ Fy+  c+ c+ +ap+++++ +++
  EPX70542.1  37 SAKKGALIEFYATWCGHCKNLAPVYEELGQTF 68 
                 58999********************9998875 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0035
        TraF 133 LlfFyrgkcpyceaqapilqafadky....glevraVsvdgrplpelpnarvdkgqaarlgvkrtPalvlvd 200
                 L+ Fy+  c+yc+ + p+++++a+ +    + +v  ++ d   + ++++           +v ++P++ l++
  EPX70542.1 163 LVEFYADWCGYCKRLTPTYEKLAKVFknepNVKVTKINADVYADVGMKH-----------QVASFPTIKLFR 223
                 778***************9987764421115666666665554433333...........555556555555 PP

>> Thioredoxin_3  Thioredoxin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.087        87       8      54 ..      49     100 ..      43     101 .. 0.67
   2 !   10.7   0.0   0.00042      0.42      10      53 ..     171     219 ..     160     222 .. 0.78

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.087
                    SSSTTCHHHHHHHHHHCH...CC.TCECEEECCTTHHHH.HHCT-SSSSEEE CS
  Thioredoxin_3   8 pgCakCpklekavkeaaa...ek.gikaevekvtdfeei.ekygVmsvPalv 54 
                    + C +C++l+ + +e+ +   ++ +i +  +++ +f e+ +ky+++  P+l+
     EPX70542.1  49 TWCGHCKNLAPVYEELGQtfdDNkDILIGKVDADTFGEVgKKYQIRGFPTLI 100
                    5599999666665555431103314666666779999999****99999986 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00042
                    STTCH...HHHHHHHHHCHCC.TCECEEECCTTHHHH.HHCT-SSSSEE CS
  Thioredoxin_3  10 CakCp...klekavkeaaaek.gikaevekvtdfeei.ekygVmsvPal 53 
                    C +C+    +++ ++++ +++ ++k++ +++  + ++ +k++V s P++
     EPX70542.1 171 CGYCKrltPTYEKLAKVFKNEpNVKVTKINADVYADVgMKHQVASFPTI 219
                    *****777444455555555549************************97 PP

>> Thioredoxin_9  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.046        46      45      68 ..      43      66 ..      28     111 .. 0.79
   2 ?    7.5   0.0    0.0034       3.4      48      78 ..     166     199 ..     122     226 .. 0.77
   3 ?   -2.8   0.1       4.9   4.9e+03      15      31 ..     284     300 ..     273     328 .. 0.59

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.046
                   EEEE--TT-HHHHHHHHHHHHHHH CS
  Thioredoxin_9 45 ilvltedwCgDaavnvPvlakiae 68
                   ++ + + wCg + +  Pv +++ +
     EPX70542.1 43 LIEFYATWCGHCKNLAPVYEELGQ 66
                   5557789**********9887765 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0034
                    E--TT-HHHHHHHHHHHHHH...HH-TTEEEEEE CS
  Thioredoxin_9  48 ltedwCgDaavnvPvlakia...elnpnievkil 78 
                    + +dwCg + +  P  +k+a   ++ pn++v+ +
     EPX70542.1 166 FYADWCGYCKRLTPTYEKLAkvfKNEPNVKVTKI 199
                    779***********98888822245566666554 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 4.9
                    HHHHHHHHHHHHHHH-- CS
  Thioredoxin_9  15 nkermlrvykkvelsee 31 
                     +e +l+  k+++l++ 
     EPX70542.1 284 AREVVLEKVKQFTLENS 300
                    44444444444444433 PP

>> Activator-TraM  Transcriptional activator TraM
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1     8e-05      0.08      19      83 ..     261     325 ..     254     356 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 8e-05
  Activator-TraM  19 vgrddPililqtinerllqdsakaqqelldqfkeeleaiasrWgddakekaervlnaalaaskea 83 
                     ++    i il    + ++++s++a+  +l++ k+   + +srW++  ++  e++l      +kea
      EPX70542.1 261 LSSAGRIPILDEFASEFMDNSRAAREVVLEKVKQFTLENSSRWTQYYRNVFEKTLKDENWVTKEA 325
                     55556688999999********************98889****************8877666665 PP

>> DDE_Tnp_1_2  Transposase DDE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.0     0.017        17      51      76 ..      43      68 ..      29      71 .. 0.86
   2 ?    5.1   0.0     0.029        29      51      77 ..     163     189 ..     152     200 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.017
  DDE_Tnp_1_2 51 vvErsfgwlkrrrslatryekLaens 76
                 ++E    w+ +++ la +ye+L +++
   EPX70542.1 43 LIEFYATWCGHCKNLAPVYEELGQTF 68
                 6788889***************9987 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.029
  DDE_Tnp_1_2  51 vvErsfgwlkrrrslatryekLaense 77 
                  +vE    w+  +++l   yekLa++++
   EPX70542.1 163 LVEFYADWCGYCKRLTPTYEKLAKVFK 189
                  67777779999************9986 PP

>> DSBA  DSBA-like thioredoxin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0      0.17   1.7e+02       2      27 ..      43      68 ..      42      78 .. 0.85
   2 ?   -0.7   0.0         1     1e+03     160     176 ..      88     107 ..      78     125 .. 0.79
   3 ?    6.5   0.0    0.0063       6.2       3      36 ..     164     200 ..     162     214 .. 0.81

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.17
                EEEEEBTTBHHHHHHHHHHHHHHHHC CS
        DSBA  2 vdeffDvlCPyCylgkerleklaars 27
                ++ef+   C++C+  ++++e+l +  
  EPX70542.1 43 LIEFYATWCGHCKNLAPVYEELGQTF 68
                689999************99987765 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 1
                 HHHTT-SSSSEEEE...TTC CS
        DSBA 160 aqslgvtGvPtvvv...dgk 176
                 +++++++G Pt ++   dg+
  EPX70542.1  88 GKKYQIRGFPTLIWfppDGS 107
                 6899*******998777665 PP

  == domain 3  score: 6.5 bits;  conditional E-value: 0.0063
                 EEEEBTTBHHHHHHHHHHHHHHHHC...CTEEEEEEE CS
        DSBA   3 deffDvlCPyCylgkerleklaars...pdvkvvlrp 36 
                 +ef+   C+yC+   + +ekla+     p+vkv++  
  EPX70542.1 164 VEFYADWCGYCKRLTPTYEKLAKVFknePNVKVTKIN 200
                 4455557***************999888999998765 PP

>> HyaE  Hydrogenase-1 expression protein HyaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.0    0.0038       3.7      48      90 ..      59     102 ..      51     107 .. 0.88
   2 ?    1.2   0.0      0.36   3.6e+02      53      94 ..     184     226 ..     181     228 .. 0.85
   3 ?   -2.1   0.0       3.7   3.6e+03       2      29 ..     311     338 ..     310     344 .. 0.80

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0038
                 HHHHHHHCT-TTS-EEEEEE.THHHHHHHHHCCT-TSSSEEEEE CS
        HyaE  48 VvlpEllkaFpnalraavva.dreqeealaerfgvlktPsllfl 90 
                  v  El + F + +++++ + d +   +++++++++ +P+l+ +
  EPX70542.1  59 PVYEELGQTFDDNKDILIGKvDADTFGEVGKKYQIRGFPTLIWF 102
                 57789************9998899999***************98 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.36
                 HHCT-TTS-EEEEEE.THHHHHHHHHCCT-TSSSEEEEEETTE CS
        HyaE  53 llkaFpnalraavva.dreqeealaerfgvlktPsllflrdge 94 
                 l k+F+n  +  v + + +  + ++ + +v  +P++ ++r+g+
  EPX70542.1 184 LAKVFKNEPNVKVTKiNADVYADVGMKHQVASFPTIKLFRKGH 226
                 7788999888888886777889999***********9999985 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 3.7
                 HHHHHTT.TEEEE-CCCHHHHHHHHSEE CS
        HyaE   2 iqrlltrkglaevdadtlddflkaagda 29 
                 +++ l+   + + +a++l + l+++++a
  EPX70542.1 311 FEKTLKDENWVTKEAKRLSKILRQKSIA 338
                 5677888899999999999999988765 PP

>> Thioredoxin_4  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0      0.11   1.1e+02      16      39 ..      42      65 ..      34      83 .. 0.82
   2 ?    8.0   0.1    0.0029       2.9      12      51 ..     158     197 ..     156     234 .. 0.85
   3 ?   -1.7   0.3       2.8   2.8e+03      82     121 ..     290     327 ..     274     348 .. 0.57

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.11
                   EEEEEE-TT-HHHHHHHHHHHHHH CS
  Thioredoxin_4 16 tvieyedlrCphCakfeeevekll 39
                    +ie+    C hC++++  +e+l 
     EPX70542.1 42 ALIEFYATWCGHCKNLAPVYEELG 65
                   589************998887765 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0029
                    T-SEEEEEEE-TT-HHHHHHHHHHHHHHHHHHHTTSEEEE CS
  Thioredoxin_4  12 dApvtvieyedlrCphCakfeeeveklleeyidtGkvkfi 51 
                    d + +++e+    C +C+++  ++ekl + + ++ +vk++
     EPX70542.1 158 DTKDVLVEFYADWCGYCKRLTPTYEKLAKVFKNEPNVKVT 197
                    67899********************999988666777665 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 2.8
                    HHHHHHHHTHHHHTTS-HHHHH.....HHHHHTS------ CS
  Thioredoxin_4  82 laikallysqqeewaeslkelaaealdkdekfeacleeek 121
                    +++k+++ ++ ++w+++  ++ +++l+++  + +  e ++
     EPX70542.1 290 EKVKQFTLENSSRWTQYYRNVFEKTLKDENWVTK--EAKR 327
                    5666666677777777766666555554444443..3333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (363 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       682  (0.0380389); expected 358.6 (0.02)
Passed bias filter:                      480  (0.0267723); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.53u 0.30s 00:00:00.83 Elapsed: 00:00:00.46
# Mc/sec: 2349.12
//
Query:       EPX70543.1  [L=144]
Description: TOM complex subunit Tom22 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.8e-40  137.9   1.4      2e-40  137.7   1.4    1.0  1  Tom22         Mitochondrial import receptor subunit Tom22
  ------ inclusion threshold ------
      0.069   13.6   2.4       0.11   12.9   2.4    1.4  1  Packaging_FI  DNA packaging protein FI


Domain annotation for each model (and alignments):
>> Tom22  Mitochondrial import receptor subunit Tom22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.7   1.4   2.3e-44     2e-40       1     138 []       1     134 [.       1     134 [. 0.87

  Alignments for each domain:
  == domain 1  score: 137.7 bits;  conditional E-value: 2.3e-44
       Tom22   1 mVkltevedeefqeeqegeeeelaeededeadetdsdseissdedddfd.vedEtlldRivALkDiippttRksissavstttslvkstlsfsGkllWv 98 
                 mVkl+ev de++ ++q ++     +e+e+   ++++d e s+++++df+ +edEt++dRi+ALk++ip t+R +i++ ++ + s v+ + sf+Gk+lWv
  EPX70543.1   1 MVKLEEVVDETELQTQGQNV----TEKEKY-IYAEEDVEESDSDESDFEgLEDETIFDRITALKEVIPVTWRVKIADGAKCAVSGVSRLSSFGGKSLWV 94 
                 9*********9987775544....444443.356666666656677776378*********************************************** PP

       Tom22  99 vttSaLLlGvPlaLaieeEqqlvemEkemklqksanella 138
                 ++tSaLLlGvP+++++e+E+ql e+Ek++k q++ane++a
  EPX70543.1  95 LSTSALLLGVPFMMSVEDEAQLSEYEKQLKDQRGANEVIA 134
                 *************************************985 PP

>> Packaging_FI  DNA packaging protein FI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   2.4   1.2e-05      0.11      35      79 ..       3      45 ..       1      62 [. 0.84

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.2e-05
                  XXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXX-------.... CS
  Packaging_FI 35 eleeelddvd.esaGqdaadsrdstehedevesadsDeaiveseiG 79
                   lee +d+++ ++ Gq+ ++  +    e++ve++dsDe++ e   G
    EPX70543.1  3 KLEEVVDETElQTQGQNVTEKEKYIYAEEDVEESDSDESDFE---G 45
                  79999*****9**********999****************99...3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       667  (0.0372023); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1079.04
//
Query:       EPX70544.1  [L=373]
Description: Mdm10/Mdm12/Mmm1 complex subunit Mdm10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.6e-93  312.3   2.1    5.7e-86  289.2   0.9    2.0  2  MDM10     Mitochondrial distribution and morphology protein 1


Domain annotation for each model (and alignments):
>> MDM10  Mitochondrial distribution and morphology protein 10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  289.2   0.9   3.2e-90   5.7e-86       1     328 [.       1     316 [.       1     322 [. 0.92
   2 !   24.7   0.0   5.4e-10   9.7e-06     396     464 ..     313     372 ..     308     373 .] 0.83

  Alignments for each domain:
  == domain 1  score: 289.2 bits;  conditional E-value: 3.2e-90
       MDM10   1 MlefmdYvqkaFeeatnWnrdnsYsnltatsdalldfsiPeglklqlsslstpnfatsytLstvgvidGslsYLyssvpLenlvsqsesipLqdlvrgY 99 
                 M++f dY+   + + tnWn +n Y nlt+t+d++l f+iP+g+++qlssl+tpnf++  ++s++ +++GslsY+ys+v+L+n+       +Lq+  +gY
  EPX70544.1   1 MVNFTDYICYEYLKKTNWNVHNLYCNLTQTADNILRFDIPSGINCQLSSLTTPNFVSKCEISAMPILNGSLSYIYSNVDLDNVKV-DPLTELQKFYEGY 98 
                 99********************************************************************************998.7899********* PP

       MDM10 100 rqiepllaaelkekeakeeakekkkkksLlygrlylPssaLeAlvikrlspttqlqlkavssqklenggtllallqkdtgkysqellvstdeaLlGlrg 198
                 r++  +      + + + e+ +  kk++Llyg ++lPs +L+A++ +rlsp + +++ a+++ + ++ggt+ +++q+dtgk s el++ t ea++Glr 
  EPX70544.1  99 RHVDVP----FIHYQGELEDFNLPKKSTLLYGCIFLPSKKLDAIFARRLSPWSLFSVLATNEVEDPDGGTMCFQWQHDTGKRSLELMYETTEAMIGLRA 193
                 ***886....46667788899999*************************************************************************** PP

       MDM10 199 lynfGgdaekkkasekasklnsslannsiysllSaGaElyygtlskspglStglRfaTlsastgkPltlTltlnPllGsisstYsvkasenstlssryd 297
                 l+n+     +     + +k +    +n+ +   S+G E yyg+l+k +g S+g+R  + +++   P+ lT+tlnP++G+i+st+s    +  ++s +yd
  EPX70544.1 194 LWNLNLT--E-----NGMKKRIDSCKNTSNMCWSLGFETYYGVLTKCAGASLGMRLHSGPSHLYSPFILTCTLNPIVGHITSTFSTAEPHVKAFSVQYD 285
                 ****322..2.....222222233344467899****************************************************************** PP

       MDM10 298 FNvYSyeSnlslGmeLwrksrkkksseeeee 328
                 FN+YSyeS+l +G eLwr +  +k+++e+++
  EPX70544.1 286 FNLYSYESKLQIGAELWRGKFFSKTQDENNR 316
                 ******************9988766665553 PP

  == domain 2  score: 24.7 bits;  conditional E-value: 5.4e-10
       MDM10 396 kkekkeeeefssVlKarldqdlnvkllWeGrvkslLvsaGvelslkkleksselklksfrklGleiqYs 464
                 ++++++ ++ +sVlK  l+   +++llW+ r++++L+++G+  +++k++     +l     +G++++Y+
  EPX70544.1 313 ENNRSRIQSCTSVLKSVLSTTGEISLLWQARIRNFLLTLGTTAHITKID-----PL----YFGIHLEYA 372
                 4555666889*********************************999988.....33....377777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (373 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       375  (0.0209158); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2708.51
//
Query:       EPX70545.1  [L=491]
Description: WD repeat protein Cdt2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.1e-21   75.3  18.9    5.3e-06   27.1   1.0    6.5  6  WD40         WD domain, G-beta repeat
    3.3e-07   30.5   0.2        2.1    8.7   0.0    4.9  5  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    0.00053   19.4   0.1     0.0019   17.6   0.0    1.8  2  WD40_like    WD40-like domain
     0.0034   16.4   1.2        2.1    7.2   0.1    3.7  5  Ge1_WD40     WD40 region of Ge1, enhancer of mRNA-decapping p


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.2   6.2e-06     0.028       8      38 .]     177     208 ..     171     208 .. 0.87
   2 !   15.5   0.2   5.4e-06     0.024       8      38 .]     227     257 ..     217     257 .. 0.87
   3 !   12.9   0.1   3.4e-05      0.15       9      38 .]     280     317 ..     272     317 .. 0.77
   4 !    9.1   0.0   0.00058       2.6      13      34 ..     344     365 ..     330     368 .. 0.89
   5 ?    3.7   0.0      0.03   1.3e+02      16      29 ..     395     408 ..     382     415 .. 0.85
   6 !   27.1   1.0   1.2e-09   5.3e-06       8      38 .]     435     465 ..     429     465 .. 0.88

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 6.2e-06
                 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  +H + +  + fs+d ++la++s D+t +++d
  EPX70545.1 177 LAHnNAIFNVNFSSDDSLLATSSGDQTAKVFD 208
                 589777**************9977******98 PP

  == domain 2  score: 15.5 bits;  conditional E-value: 5.4e-06
                 ESSSSEEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40   8 tGHssvtslafspdgaw.lasGsdDgtvriWd 38 
                   H sv  + f++++++ ++++s+Dg++ +Wd
  EPX70545.1 227 HSH-SVKQVNFCDNSPYnIVTCSRDGSLIFWD 257
                 456.6999999999999999***********9 PP

  == domain 3  score: 12.9 bits;  conditional E-value: 3.4e-05
                 SS..SS....EEEEEEETTSSE..EEEEETTSEEEEEE CS
        WD40   9 GH..ss....vtslafspdgaw..lasGsdDgtvriWd 38 
                 +H  ++    vts  + pd++   ++s+s + t+++Wd
  EPX70545.1 280 AHerQNrdcsVTSAIWLPDSTSqvVSSCSANSTLKLWD 317
                 66542245669999999999999677899********9 PP

  == domain 4  score: 9.1 bits;  conditional E-value: 0.00058
                 EEEEEEETTSSEEEEEETTSEE CS
        WD40  13 vtslafspdgawlasGsdDgtv 34 
                 +ts++ sp g+ + ++s+D+tv
  EPX70545.1 344 ITSVCASPRGDRVYAASRDNTV 365
                 9********************9 PP

  == domain 5  score: 3.7 bits;  conditional E-value: 0.03
                 EEEETTSSEEEEEE CS
        WD40  16 lafspdgawlasGs 29 
                 +a spdg+ la+G+
  EPX70545.1 395 IACSPDGSTLACGG 408
                 678********996 PP

  == domain 6  score: 27.1 bits;  conditional E-value: 1.2e-09
                 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  GH ++vt++++s d+++ +  sdDg+vr+W+
  EPX70545.1 435 GGHsKDVTAVDWSNDKQLASI-SDDGSVRVWN 465
                 59*999************544.67*******8 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.8   0.0    0.0039        17      43      68 ..     132     157 ..     108     163 .. 0.90
   2 !    8.7   0.0   0.00046       2.1       6      76 ..     138     218 ..     135     239 .. 0.78
   3 ?    4.2   0.0     0.012        54      33      80 ..     282     331 ..     263     336 .. 0.77
   4 ?   -0.4   0.0      0.32   1.4e+03      35      69 ..     338     372 ..     329     375 .. 0.85
   5 !    6.8   0.1    0.0018       8.1      36      76 ..     436     475 ..     422     488 .. 0.79

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0039
  ANAPC4_WD40  43 sLaWkpdgklLavaysdgevrlldae 68 
                  +L + ++++lLav ++ g+++l+d++
   EPX70545.1 132 CLGYAHNESLLAVCTETGALELFDSK 157
                  68899*****************9985 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00046
  ANAPC4_WD40   6 tmDLiAlatedgellvfRlng............qrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhsl 76 
                  +  L+A+ te+g l++f  +             +r+ +    ++++ + +++++ d++lLa +  d + +++d  +++++  l
   EPX70545.1 138 NESLLAVCTETGALELFDSKYfarqnednqpsaRRLHGW--LAHNNAIFNVNFSSDDSLLATSSGDQTAKVFDLATQQCITRL 218
                  566788888888887776666566666666665666665..68899999*************************999998765 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.012
  ANAPC4_WD40  33 eedkedsevrsLaWkpdgk..lLavaysdgevrlldaesgkvvhslsvks 80 
                  e++++d +v+s  W pd +  +     ++++++l d  + ++v+ l+ +s
   EPX70545.1 282 ERQNRDCSVTSAIWLPDSTsqVVSSCSANSTLKLWDLRNIHTVRPLPLSS 331
                  67999***********976114444556779******9999998887765 PP

  == domain 4  score: -0.4 bits;  conditional E-value: 0.32
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlldaes 69 
                  + +d  ++s++ +p g     a  d++v  +++++
   EPX70545.1 338 SRRDYGITSVCASPRGDRVYAASRDNTVYEYSSQN 372
                  567888999*****************998888776 PP

  == domain 5  score: 6.8 bits;  conditional E-value: 0.0018
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhsl 76 
                  ++++ v+++ W++d k La   +dg+vr+ +++   +  sl
   EPX70545.1 436 GHSKDVTAVDWSND-KQLASISDDGSVRVWNSSLHGTAASL 475
                  56789******976.6799999*******998766655555 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   4.1e-07    0.0019       2      88 ..     182     277 ..     181     283 .. 0.80
   2 ?   -1.5   0.0      0.28   1.3e+03      10      38 ..     427     455 ..     423     461 .. 0.82

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 4.1e-07
   WD40_like   2 eiYsidiskkgslilyGgkddkctvlkleslesvsiv..esf....edSvifvkllddd..lilvvtlDGtillsllenee.evenekieedistv 88 
                  i+++++s + sl++  + d++++v++l +++ ++ +   +f    + Sv  v++ d+    i+ ++ DG ++  +++    +v+ e+ +  + ++
  EPX70545.1 182 AIFNVNFSSDDSLLATSSGDQTAKVFDLATQQCITRLgrRGFegyhSHSVKQVNFCDNSpyNIVTCSRDGSLIFWDMRTHGiTVDGEHYQKPVLKI 277
                 599*******************************97522233111368**********9888999*******999998766577777766666555 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.28
   WD40_like  10 kkgslilyGgkddkctvlkleslesvsiv 38 
                   +s +l+Gg+++ +t ++  ++++  ++
  EPX70545.1 427 SSSSAMLVGGHSKDVTAVDWSNDKQLASI 455
                 56788999****99999999999887766 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.2   0.1   0.00047       2.1     147     221 ..     143     214 ..     133     243 .. 0.64
   2 ?    1.9   0.2     0.019        87      67     132 ..     230     301 ..     214     323 .. 0.56
   3 ?    1.3   0.1      0.03   1.3e+02     258     281 ..     302     325 ..     242     345 .. 0.64
   4 ?   -0.7   0.0      0.12   5.4e+02     165     204 ..     366     406 ..     324     420 .. 0.67
   5 ?    2.1   0.0     0.017        75     176     220 ..     426     470 ..     415     478 .. 0.67

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.00047
    Ge1_WD40 147 lvltrgdkaeiwsvdmiaskygsgelsveeieegllkieehsliveaafspdGtalatasedGevkffqvylede 221
                  v t++   e+++ +  a++ +  + s+ +  +g   + ++  i +  fs+d   lat+s d + k f +  ++ 
  EPX70545.1 143 AVCTETGALELFDSKYFARQNEDNQPSARR-LHGW--LAHNNAIFNVNFSSDDSLLATSSGDQTAKVFDLATQQC 214
                 555666666666666665554443333222.2344..4567799************************9877654 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.019
    Ge1_WD40  67 evldlafahvsskillavdekgslfvykvee....veskllvslllkveapietvvs..esdrviWCPyipe 132
                 +v+ ++f   s   +++    gsl+ +++++    v+++   + +lk+++ +e +    +++  iW P  ++
  EPX70545.1 230 SVKQVNFCDNSPYNIVTCSRDGSLIFWDMRThgitVDGEHYQKPVLKIKKAHERQNRdcSVTSAIWLPDSTS 301
                 566667777777777777777777777776411114455566667777654443333003344455443222 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.03
    Ge1_WD40 258 faitgadnnselklWscelWtClq 281
                  ++ ++++ns lklW     + ++
  EPX70545.1 302 QVVSSCSANSTLKLWDLRNIHTVR 325
                 357778888888888766555555 PP

  == domain 4  score: -0.7 bits;  conditional E-value: 0.12
    Ge1_WD40 165 skygsgelsveeiee.gllkieehsliveaafspdGtalat 204
                  +y+s++l++   ++    +++  s  v+ a spdG +la 
  EPX70545.1 366 YEYSSQNLESGPYKTyNDPRLRISSFYVKIACSPDGSTLAC 406
                 44444444443333322333444456788889999999986 PP

  == domain 5  score: 2.1 bits;  conditional E-value: 0.017
    Ge1_WD40 176 eieegllkieehs.liveaafspdGtalatasedGevkffqvyled 220
                 + +++ + +  hs  ++   +s d   la  s dG v+ +   l++
  EPX70545.1 426 NSSSSAMLVGGHSkDVTAVDWSND-KQLASISDDGSVRVWNSSLHG 470
                 444555556666635555566666.578888899999888777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (491 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       404  (0.0225333); expected 358.6 (0.02)
Passed bias filter:                      348  (0.0194099); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.30s 00:00:00.86 Elapsed: 00:00:00.47
# Mc/sec: 3152.77
//
Query:       EPX70546.1  [L=967]
Description: mitotic cohesin complex [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-32  112.0   1.7    1.3e-32  112.0   1.7    2.3  2  STAG      STAG domain


Domain annotation for each model (and alignments):
>> STAG  STAG domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.0   1.7   7.3e-37   1.3e-32       2     110 ..     162     271 ..     161     274 .. 0.98
   2 ?   -2.1   0.2       0.2   3.5e+03      41      73 ..     650     686 ..     616     687 .. 0.71

  Alignments for each domain:
  == domain 1  score: 112.0 bits;  conditional E-value: 7.3e-37
        STAG   2 eYpliskkkklkkfrknlveFfeklvesahekglLy.deelmenlltwltalSssklRpfRhtaTlialklqtaLvevakelskeleklqrqleaekkk 99 
                 eYpl+sk++k+++frk+l++F+  +v+++++k++Ly d++ +en+++w++a+Sss++Rp+RhtaT+++l +++aL+e  +e+ ++++ +++ql++e+k+
  EPX70546.1 162 EYPLNSKNAKFRNFRKKLSQFLAYFVSQLSSKKYLYnDSARFENIMSWIVAMSSSTMRPIRHTATVFCLIIMSALCEESREFLSDHAIASKQLAKEEKR 260
                 8***********************************9999*********************************************************** PP

        STAG 100 kkankkrleel 110
                  + nk+r++el
  EPX70546.1 261 ARPNKNRIQEL 271
                 ********987 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.2
        STAG  41 lmenlltwltalS....ssklRpfRhtaTlialklqt 73 
                 l + + t+l  lS    +s+  ++ h +T++ lk+q+
  EPX70546.1 650 LSKPFETLLLNLSkfflTSNYASIIHDCTVVFLKMQS 686
                 6666777777777776778888888999999999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (967 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1039  (0.0579508); expected 358.6 (0.02)
Passed bias filter:                      545  (0.0303977); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.91u 0.40s 00:00:01.31 Elapsed: 00:00:00.59
# Mc/sec: 4896.98
//
Query:       EPX70547.1  [L=232]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.11   13.0   0.1       0.26   11.9   0.1    1.6  1  SRCR_2    Scavenger receptor cysteine-rich domain


Domain annotation for each model (and alignments):
>> SRCR_2  Scavenger receptor cysteine-rich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   1.4e-05      0.26      34      80 ..      16      62 ..       8      74 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 1.4e-05
      SRCR_2 34 qqlGyssltesksvnlsdlslnsskefvklsskleklleealqsses 80
                +++G++++++sk+ +l+d + +s k+++k+++ +e++l+++ +++++
  EPX70547.1 16 KKIGFNNAPTSKEADLEDDTPKSFKRLMKMKEFSENKLKKQAEPEKK 62
                689***************************99999999999886654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1734  (0.0967148); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.34s 00:00:00.99 Elapsed: 00:00:00.55
# Mc/sec: 1275.59
//
Query:       EPX70548.1  [L=459]
Description: CLIP170 family protein Tip1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.1e-13   49.2   2.2    4.5e-13   49.0   1.1    1.7  1  CAP_GLY         CAP-Gly domain
      2e-05   23.9  13.4     0.0021   17.2   9.6    2.3  2  Atg14           Vacuolar sorting 38 and autophagy-related sub
    0.00013   22.2  10.0     0.0021   18.3   1.9    2.3  2  ATG16           Autophagy protein 16 (ATG16)
     0.0014   17.6  18.5      0.016   14.1  10.8    2.3  2  Spc7            Spc7 kinetochore protein
     0.0052   16.7   2.1      0.015   15.2   2.1    1.8  1  UCH_C           Ubiquitin carboxyl-terminal hydrolases
     0.0068   16.2   8.9     0.0068   16.2   8.9    2.3  2  DASH_Spc34      DASH complex subunit Spc34
     0.0074   16.3  24.5       0.43   10.6  13.1    3.2  2  CENP-F_leu_zip  Leucine-rich repeats of kinetochore protein C
     0.0091   16.2  21.7       0.43   10.7  12.1    2.7  2  Tropomyosin_1   Tropomyosin like
  ------ inclusion threshold ------
      0.019   15.3   2.3      0.028   14.7   0.9    1.9  2  IL5             Interleukin 5
      0.043   13.8   5.5       0.12   12.4   3.2    2.7  2  Med10           Transcription factor subunit Med10 of Mediato
      0.068   12.6  17.3       0.81    9.1  10.7    2.2  2  HMMR_N          Hyaluronan mediated motility receptor N-termi
       0.18   11.5   8.5       0.17   11.6   1.5    3.0  3  RPW8            Arabidopsis broad-spectrum mildew resistance 
       0.31   10.4  20.5      0.056   12.8  12.9    2.6  2  GAS             Growth-arrest specific micro-tubule binding
       0.35   11.3   3.7         10    6.7   2.9    3.1  3  NPV_P10         Nucleopolyhedrovirus P10 protein
       0.41   11.0  16.0        4.2    7.7   3.7    4.2  4  BLOC1_2         Biogenesis of lysosome-related organelles com
       0.49   11.0  13.9        1.1    9.9   4.7    3.4  3  Syntaxin-6_N    Syntaxin 6, N-terminal
        0.5   10.2   2.9        1.1    9.0   0.4    2.3  2  DUF501          Protein of unknown function (DUF501)
       0.67    8.4   6.3       0.53    8.8   4.9    1.4  1  FUSC            Fusaric acid resistance protein family
       0.71    9.2   9.4        3.5    6.9   1.8    2.2  2  FAM76           FAM76 protein
       0.72   10.5   7.3       0.34   11.5   4.3    2.0  1  DUF883          Bacterial protein of unknown function (DUF883
       0.74    9.3  16.2        6.1    6.3   0.3    2.1  2  Exonuc_VII_L    Exonuclease VII, large subunit
       0.75    9.8  10.7        5.2    7.1   6.0    3.4  4  DUF1664         Protein of unknown function (DUF1664)
       0.86    9.6   6.9        1.2    9.1   0.1    3.4  3  DUF4250         Domain of unknown function (DUF4250)
        1.1    9.6   8.1        4.6    7.6   7.0    2.4  2  GAT             GAT domain
        1.2    9.6  20.8        4.1    7.9   0.1    3.6  3  ZapB            Cell division protein ZapB
        1.3    7.8  22.5        4.3    6.1   1.8    3.1  3  CALCOCO1        Calcium binding and coiled-coil domain (CALCO
        1.9    8.2  19.4       0.32   10.8  10.4    2.6  2  BBP1_C          Spindle pole body component BBP1, C-terminal
          2    7.8  27.6        1.5    8.2  15.6    2.5  3  Golgin_A5       Golgin subfamily A member 5
          2    8.1   4.8        3.5    7.3   4.8    1.3  1  DUF4239         Protein of unknown function (DUF4239)
        2.3    8.4  15.2      0.056   13.5   5.4    3.2  3  Med9            RNA polymerase II transcription mediator comp
        2.4    8.5  14.9        5.6    7.4   3.0    3.4  3  TBCA            Tubulin binding cofactor A
        2.5    8.3  15.1        9.3    6.4   7.4    3.0  3  Fib_alpha       Fibrinogen alpha/beta chain family
          3    7.1  20.3       0.47    9.7  12.7    3.0  3  DUF3450         Protein of unknown function (DUF3450)
        4.8    7.3   6.1        1.5    8.9   1.0    2.5  3  Flagellin_N     Bacterial flagellin N-terminal helical region
          5    7.4   9.7        5.8    7.2   4.7    2.7  2  Seryl_tRNA_N    Seryl-tRNA synthetase N-terminal domain
          5    6.3  13.6        1.4    8.2   7.5    2.6  3  HemX            HemX, putative uroporphyrinogen-III C-methylt
        5.2    6.2  10.5        2.6    7.2   3.8    2.3  2  TMPIT           TMPIT-like protein
        5.8    7.5  13.8        3.7    8.1   8.0    2.8  3  Spectrin        Spectrin repeat
        6.4    6.0  11.0      1e+02    2.1  11.0    2.1  1  DUF4407         Domain of unknown function (DUF4407)
        6.6    7.1  20.9        4.7    7.6   1.7    2.2  2  Fez1            Fez1
        7.5    6.2  20.5        1.9    8.1   0.8    2.6  2  Lebercilin      Ciliary protein causing Leber congenital amau
          9    6.1  15.0         13    5.6   9.4    2.6  2  PCRF            PCRF domain


Domain annotation for each model (and alignments):
>> CAP_GLY  CAP-Gly domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.0   1.1     1e-15   4.5e-13       8      65 .]      11      73 ..       4      73 .. 0.83

  Alignments for each domain:
  == domain 1  score: 49.0 bits;  conditional E-value: 1e-15
     CAP_GLY  8 kegrrGvvryvGpvpfakgewvGvel..d.epnGkndGsvkgkrYFeckpn..rGvFvrpekv 65
                 +g+rG vryvG+v+++kg +vG+el  +  + Gkn G v+gk+YF+++++   G+F++ +k+
  EPX70548.1 11 ITGERGFVRYVGEVEGRKGNFVGLELfpEyAESGKNRGIVDGKEYFKTRNGdrTGIFLPIDKC 73
                46899********************95422348***************976559****99986 PP

>> Atg14  Vacuolar sorting 38 and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   9.6   4.9e-06    0.0021      37     144 ..     137     237 ..     122     268 .. 0.65
   2 !    7.7   0.1    0.0038       1.6      37     119 ..     284     397 ..     275     424 .. 0.75

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 4.9e-06
       Atg14  37 ekeslkkkiekalegkeeaeqledkiknkkakleelksliadlrerlqelkdklsqlkkeieekkkklaklsdklkkRrsdleslqneleerrkkqiak 135
                 + + l+k+ie++l ++++ +q+ +++ ++ ++l+ l +   d++++l el+++++   ++i++ +++ ++++++ k   + le  +++l e       +
  EPX70548.1 137 TEKILQKRIEDLLFERQNHQQQLEEVLSSVDQLQALVTNFTDQQDELDELRERITMKEERIQQMREEASQRRHDFKSTIEYLEDSTTRLVE-------S 228
                 5678999999999999977777777766666666666666666666666666666666666666666666666666444444444444444.......4 PP

       Atg14 136 lqdaikrie 144
                 + + i + e
  EPX70548.1 229 YEHRISELE 237
                 444444333 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.0038
       Atg14  37 ekeslkkkiekalegke........eaeqledkiknkkakleelksliadlrerlqelkdklsqlkkeieekkkklaklsdklk............... 112
                 e+ s+ +k   ++e+ +        e++++ ++ + + ++  + +++ +  + +++ l+ k+++l++  +ek+ ++++l + l+               
  EPX70548.1 284 ENGSINGKHRSMVENGSptltnvsyESHSRGKASRELPENHPQRRQTLEFYEIEIEVLRNKVESLQADCDEKSYYISELEARLSesgftpsdmkpthds 382
                 566667777777777777777777777777777788888888889999999999*****************************9999888877666654 PP

       Atg14 113 ........kRrsdle 119
                          R s+le
  EPX70548.1 383 taerekllNRISELE 397
                 444444443333333 PP

>> ATG16  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   1.9     5e-06    0.0021     122     182 ..     142     205 ..      75     243 .. 0.67
   2 !    8.7   1.3    0.0043       1.8      56     159 ..     311     412 ..     245     417 .. 0.78

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 5e-06
       ATG16 122 eerlaeleaeraaletklkdreeelrekeklvq...dlqDElsaLqlqlnqaEeklrklekENk 182
                 ++r+++l  er++ +++l++    + ++++lv    d+qDEl+ L+ + ++ Ee+ +++++E++
  EPX70548.1 142 QKRIEDLLFERQNHQQQLEEVLSSVDQLQALVTnftDQQDELDELRERITMKEERIQQMREEAS 205
                 4455555555555555555554444444444444445555555555555555555555555543 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0043
       ATG16  56 ksakekeasasq......snskqsakiqsleqklaqlreelaelyksrgelaqrllelneelqkleeklkedeerlaeleaeraaletklkdreeelre 148
                 +s+ +      +      ++++++++++  e ++  lr+ ++ l+  + e ++ + el++ l++    + +d +  ++ +aer++l  +++++e ++ e
  EPX70548.1 311 HSRGK------AsrelpeNHPQRRQTLEFYEIEIEVLRNKVESLQADCDEKSYYISELEARLSESG-FTPSDMKPTHDSTAEREKLLNRISELESTI-E 401
                 11222......1223355788999**************************************9875.6778888889999***********999887.5 PP

       ATG16 149 keklvqdlqDE 159
                 k  l++d+  E
  EPX70548.1 402 KMSLHEDFETE 412
                 67777766655 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1  10.8   3.8e-05     0.016     156     258 ..     139     241 ..     129     251 .. 0.72
   2 !    7.9   0.9    0.0028       1.2     195     262 ..     332     405 ..     297     419 .. 0.65

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 3.8e-05
        Spc7 156 elLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqk.seleeeiaea 253
                 + L+k+ e l    ++ +++ +e+ + +++lq+ ++++++ +++eL elre+++  ++ i++ ++e ++++ + ++  e +e+ +++  +++e +i+e 
  EPX70548.1 139 KILQKRIEDLLFERQNHQQQLEEVLSSVDQLQALVTNFTD-QQDELDELRERITMKEERIQQMREEASQRRHDFKSTIEYLEDSTTRLvESYEHRISEL 236
                 5555555555555555555555555555555555555444.6**********************************99999998877615577788887 PP

        Spc7 254 ervle 258
                 e  l+
  EPX70548.1 237 EFQLD 241
                 76655 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0028
        Spc7 195 sidkeeLeelreelaelkaeieekkkelaelqeqleele......ekieelkeqkseleeeiaeaervleeckg 262
                 +  + e+e lr+++++l+a+ +ek+  ++el+++l e+       +   + ++++++l ++i+e e+++e+   
  EPX70548.1 332 EFYEIEIEVLRNKVESLQADCDEKSYYISELEARLSESGftpsdmKPTHDSTAEREKLLNRISELESTIEKMSL 405
                 34456777777777777777777777777777777776411111123334456666666666666666666555 PP

>> UCH_C  Ubiquitin carboxyl-terminal hydrolases
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   2.1   3.4e-05     0.015       2      29 ..     184     211 ..     183     213 .. 0.95

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 3.4e-05
       UCH_C   2 aeleakLeeEeeKrerwkeENaRRrHNY 29 
                 +el +++ + ee+ ++ +eE + RrH++
  EPX70548.1 184 DELRERITMKEERIQQMREEASQRRHDF 211
                 68999**********************8 PP

>> DASH_Spc34  DASH complex subunit Spc34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   8.9   1.6e-05    0.0068     178     253 ..     160     241 ..     119     243 .. 0.81
   2 ?    3.1   1.7      0.16        68     176     252 ..     327     400 ..     292     413 .. 0.62

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.6e-05
  DASH_Spc34 178 e.......kieelreeYeelseeieeleaeiaeQkkqLeaqnknesessseddsesetsk..skdvdelirkEeeeIeeLerklk 253
                 e       ++++l ++++++++e++el+++i  +++++++++++ s++ ++ +s+    +  + ++++l++  e+ I eLe +l+
  EPX70548.1 160 EevlssvdQLQALVTNFTDQQDELDELRERITMKEERIQQMREEASQRRHDFKSTI---EylEDSTTRLVESYEHRISELEFQLD 241
                 145555559**********************************9988876554333...23589999**************9986 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.16
  DASH_Spc34 176 akekieelreeYeelseeieeleaeiaeQkkqLeaqnknesessseddsesetskskdvdelirkEeeeIeeLerkl 252
                  ++++e ++ e e l++++e+l+a+ +e+  ++++ + + ses  + ++ + t++    +   +k  + I eLe+ +
  EPX70548.1 327 RRQTLEFYEIEIEVLRNKVESLQADCDEKSYYISELEARLSESGFTPSDMKPTHD---STAEREKLLNRISELESTI 400
                 4455556666666677777777777777777777777666666655433333333...2222222223344444443 PP

>> CENP-F_leu_zip  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6  13.1     0.001      0.43      35     136 ..     140     241 ..     133     245 .. 0.77
   2 !    9.4   3.0    0.0023      0.98      57     105 ..     320     368 ..     302     403 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.001
  CENP-F_leu_zip  35 mseenqekvileaEtskaevetlkeeieelaeelreleldLvalrsekeeLekelqkkqervseLeslnsslenlleekEqekvqmkeeskaave 129
                     ++++  e++  e  + ++++e++ + +++l++  ++++ + ++l + +e ++ + +  q+  +e  +++ ++++++e +E+   ++ e+++++++
      EPX70548.1 140 ILQKRIEDLLFERQNHQQQLEEVLSSVDQLQALVTNFTDQQDELDELRERITMKEERIQQMREEASQRRHDFKSTIEYLEDSTTRLVESYEHRIS 234
                     5677888899999999999998887777766666666665555555555555555555555566778999************************* PP

  CENP-F_leu_zip 130 eLqtqlk 136
                     eL+ ql 
      EPX70548.1 235 ELEFQLD 241
                     ***9986 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.0023
  CENP-F_leu_zip  57 lkeeieelaeelreleldLvalrsekeeLekelqkkqervseLeslnss 105
                     l e+  + +++l+  e++++ lr+  e+L+ ++ +k   +seLe++ s+
      EPX70548.1 320 LPENHPQRRQTLEFYEIEIEVLRNKVESLQADCDEKSYYISELEARLSE 368
                     55555666899999******************************98775 PP

>> Tropomyosin_1  Tropomyosin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7  12.1     0.001      0.43      41     126 ..     156     242 ..     133     250 .. 0.82
   2 !   10.2   2.0    0.0015      0.64      14      91 ..     315     402 ..     302     417 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.001
  Tropomyosin_1  41 tkknqqleeevekleeklkeakekaeesekkktnnealtrkiqlLEeeleesdkkLkettekLretdvk.aeelERkvkaLeqerde 126
                    +++++++ + v++l++ +++ +++++e ++++      + +iq++ ee+ +  ++ k+t+e L+++  +  e +E ++ +Le + d+
     EPX70548.1 156 QQQLEEVLSSVDQLQALVTNFTDQQDELDELRERITMKEERIQQMREEASQRRHDFKSTIEYLEDSTTRlVESYEHRISELEFQLDA 242
                    3344444468999**************99999999999**************************987654899********977665 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.0015
  Tropomyosin_1  14 ekaeeleekvKeleqenlekeqeiksLtkknqqleeevekleeklkeakekaees........ekkktnne..altrkiqlLEeelee 91 
                    +   el e+  +  q+ +  e ei+ L +k++ l++++++ +  ++e ++ ++es         ++++++e  +l  +i  LE  +e+
     EPX70548.1 315 KASRELPENHPQRRQTLEFYEIEIEVLRNKVESLQADCDEKSYYISELEARLSESgftpsdmkPTHDSTAEreKLLNRISELESTIEK 402
                    55567777778888999999*******************9999999999888876222211112334444355777788888877775 PP

>> IL5  Interleukin 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.9   6.5e-05     0.028      35     100 ..     151     220 ..     129     228 .. 0.87
   2 ?   -1.9   0.0       9.5   4.1e+03      10      45 ..     397     432 ..     391     438 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 6.5e-05
                 SSS-GGGGHHHHHHHHHHHH....TTS--SSTHHHHHHHHHHHHHHHHHHHHTTTSSEEEHHHHHHHHHH CS
         IL5  35 vhknhqlcieeifqGidtlk....nqtvqgeaveklfqnlslikkyidlqkkkcgeerrrvkqfldylqe 100
                 +++nhq  +ee++  +d l+    n t q++ +++l + +++  + i++ +++ ++ r+  k  ++yl++
  EPX70548.1 151 ERQNHQQQLEEVLSSVDQLQalvtNFTDQQDELDELRERITMKEERIQQMREEASQRRHDFKSTIEYLED 220
                 679**************9973333677899************9*************************86 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 9.5
                 HHHHHHHHHTHHHHTT-SS-EEE--SSS-GGGGHHH CS
         IL5  10 ketltllsthrtllignetlrisvPvhknhqlciee 45 
                 + t+  +s h  + ++n +   ++P+  +h+    e
  EPX70548.1 397 ESTIEKMSLHEDFETENPSSLNKIPEDSDHNTVWCE 432
                 568889999999999999999999999999866555 PP

>> Med10  Transcription factor subunit Med10 of Mediator complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   3.2   0.00028      0.12       1      57 [.     156     212 ..     156     301 .. 0.93
   2 ?   -0.1   0.0         2   8.4e+02      25      50 ..     380     408 ..     333     423 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00028
                 HHHHHHHHHHHHHHHHHHHS--TT.S-TTHHHHHHHHHHHHHHHHHHHHH..HH--E CS
       Med10   1 eqqlkeviqsllelgvqvsdydenessqevlaqklktlvesLqelsktaskllqdik 57 
                 +qql+ev+ s+ +l++ v+++++++ + ++l ++++  +e++q++ ++as+  +d k
  EPX70548.1 156 QQQLEEVLSSVDQLQALVTNFTDQQDELDELRERITMKEERIQQMREEASQRRHDFK 212
                 69***********************************************98766655 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 2
                 ....S-TTHHHHHHHHHHHHHHHHHHHHH CS
       Med10  25 e...ssqevlaqklktlvesLqelsktas 50 
                 +    ++e l +++++l+++++++s +++
  EPX70548.1 380 HdstAEREKLLNRISELESTIEKMSLHED 408
                 24447788999999999999998887665 PP

>> HMMR_N  Hyaluronan mediated motility receptor N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1  10.7    0.0019      0.81     208     306 ..     141     239 ..     133     273 .. 0.79
   2 ?    7.6   0.5    0.0056       2.4     187     245 ..     341     404 ..     318     423 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.0019
      HMMR_N 208 LkeklvslekekieekseteklleyieelsnvseqlekykldiaqleellkekndeiesLkssLeekeqelskqvkdlnekckllekekeelvreeeek 306
                 L+ ++ +l  e+++ +++ e+ l  +++l+++  +    + ++++l+e +  k++ i++++++ +++ + ++ +++ l+     l ++ e+ ++e e +
  EPX70548.1 141 LQKRIEDLLFERQNHQQQLEEVLSSVDQLQALVTNFTDQQDELDELRERITMKEERIQQMREEASQRRHDFKSTIEYLEDSTTRLVESYEHRISELEFQ 239
                 677777777777788888888888888888888888888888999999999999999999998888888888888888877777777777666665544 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0056
      HMMR_N 187 meaklqvtqknLeeskakvaqLkeklvsl......ekekieekseteklleyieelsnvseqlek 245
                 +  k++++q++ +e    +++L+ +l+++      +k   +  +e ekll+ i+el++++e++  
  EPX70548.1 341 LRNKVESLQADCDEKSYYISELEARLSESgftpsdMKPTHDSTAEREKLLNRISELESTIEKM-S 404
                 557899999999999999999999998763333224555888899999***999999999998.3 PP

>> RPW8  Arabidopsis broad-spectrum mildew resistance protein RPW8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   1.5   0.00039      0.17      13      82 ..     159     229 ..     156     237 .. 0.90
   2 ?    2.0   0.0      0.35   1.5e+02      43      74 ..     337     368 ..     328     371 .. 0.88
   3 ?    0.1   0.2       1.4   5.8e+02      38      70 ..     387     419 ..     375     426 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00039
        RPW8  13 lgellkaileakkksldfksilkrLestleritPvvkeieklnkeldrpreeieeLkklLeka.ekLVekc 82 
                 l+e+l  + + +  +++f  + ++L++  erit   ++i+++++e  ++r+++++ ++ Le+   +LVe +
  EPX70548.1 159 LEEVLSSVDQLQALVTNFTDQQDELDELRERITMKEERIQQMREEASQRRHDFKSTIEYLEDStTRLVESY 229
                 788999999999999*******************************99999*********98625788877 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.35
        RPW8  43 ritPvvkeieklnkeldrpreeieeLkklLek 74 
                 +i+ +++++e+l+++ d++   i eL+ +L +
  EPX70548.1 337 EIEVLRNKVESLQADCDEKSYYISELEARLSE 368
                 5778899*************9*****999976 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 1.4
        RPW8  38 estleritPvvkeieklnkeldrpreeieeLkk 70 
                 e+ l+ri+ +   iek++ + d ++e+  +L+k
  EPX70548.1 387 EKLLNRISELESTIEKMSLHEDFETENPSSLNK 419
                 567888888888899988888888887777776 PP

>> GAS  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8  12.9   0.00013     0.056      40     133 ..     136     233 ..     130     246 .. 0.76
   2 ?    0.8   0.1      0.64   2.7e+02     146     176 ..     340     373 ..     326     385 .. 0.64

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 0.00013
         GAS  40 kkeernekelseisqenkrlkepLkkaeeeveeLrkqlknyekdkqslknlkarlkelekelkdlkwehevleqrfek....vekerdelykkfeaai 133
                   e+  +k+++++  e ++ +++L+++   v++L++ + n+  ++ +l++l++r+++ e+ ++++++e+ + ++ f++    +e++  +l +++e+ i
  EPX70548.1 136 PTEKILQKRIEDLLFERQNHQQQLEEVLSSVDQLQALVTNFTDQQDELDELRERITMKEERIQQMREEASQRRHDFKStieyLEDSTTRLVESYEHRI 233
                 56777899999999999999999999999999999999999999999999999999999999999999877666665411114445555555555544 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.64
         GAS 146 lLekklkalqeelEkke...aqleevlaaanldp 176
                 +L +k+++lq++ ++k     +le+ l+++++ p
  EPX70548.1 340 VLRNKVESLQADCDEKSyyiSELEARLSESGFTP 373
                 5777777777777777744444444455555555 PP

>> NPV_P10  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   2.9     0.023        10      12      52 ..     158     198 ..     153     207 .. 0.50
   2 ?   -1.2   0.0       6.8   2.9e+03      22      48 ..     217     244 ..     206     248 .. 0.69
   3 ?    1.0   0.0       1.4   6.1e+02      13      29 ..     338     354 ..     333     369 .. 0.63

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.023
     NPV_P10  12 dikavddkVdalqqqvddvqenlpdvtelnekLdaqsaqLa 52 
                   ++v + Vd lq+ v++ +++  +++el e++    + ++
  EPX70548.1 158 QLEEVLSSVDQLQALVTNFTDQQDELDELRERITMKEERIQ 198
                 33344444555555555555555555555554444444444 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 6.8
     NPV_P10  22 alqqqvddvqenl.pdvtelnekLdaqs 48 
                  l+++ +++ e     ++el+ +Lda s
  EPX70548.1 217 YLEDSTTRLVESYeHRISELEFQLDAHS 244
                 5566666655554156899999999987 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 1.4
     NPV_P10  13 ikavddkVdalqqqvdd 29 
                 i+ + +kV++lq+  d+
  EPX70548.1 338 IEVLRNKVESLQADCDE 354
                 66677777777765543 PP

>> BLOC1_2  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   3.7    0.0098       4.2      49      91 ..     148     190 ..     138     195 .. 0.85
   2 ?    4.0   0.3      0.15        62      24      68 ..     196     241 ..     188     268 .. 0.81
   3 ?    3.8   0.2      0.16        70      55      95 ..     326     366 ..     315     367 .. 0.89
   4 ?    1.7   0.0      0.77   3.3e+02      52      77 ..     378     403 ..     372     406 .. 0.74

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0098
     BLOC1_2  49 kleklnekyeelqpylqqidqiekqvteLeeavseLDeyskeL 91 
                  l + ++ +++l++ l+++dq+++ vt +++  +eLDe   ++
  EPX70548.1 148 LLFERQNHQQQLEEVLSSVDQLQALVTNFTDQQDELDELRERI 190
                 5556788899***************************987766 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.15
     BLOC1_2  24 lLeklNeaasekykklkdvaaslekkleklnekye.elqpylqqid 68 
                  ++++ e+as++ ++ k+ ++ le++  +l e ye  ++++  q+d
  EPX70548.1 196 RIQQMREEASQRRHDFKSTIEYLEDSTTRLVESYEhRISELEFQLD 241
                 5789999999999999999999999999999999855666555555 PP

  == domain 3  score: 3.8 bits;  conditional E-value: 0.16
     BLOC1_2  55 ekyeelqpylqqidqiekqvteLeeavseLDeyskeLEakf 95 
                 ++ ++l+ y  +i+ + ++v++L++  +e   y++eLEa++
  EPX70548.1 326 QRRQTLEFYEIEIEVLRNKVESLQADCDEKSYYISELEARL 366
                 667889999999*************************9986 PP

  == domain 4  score: 1.7 bits;  conditional E-value: 0.77
     BLOC1_2  52 klnekyeelqpylqqidqiekqvteL 77 
                  +    +e +++l++i ++e +++++
  EPX70548.1 378 PTHDSTAEREKLLNRISELESTIEKM 403
                 55566677788888888888888887 PP

>> Syntaxin-6_N  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   4.7    0.0025       1.1       8      74 ..     160     226 ..     127     245 .. 0.79
   2 ?    4.5   1.4      0.12        52       1      70 [.     250     363 ..     250     403 .. 0.63
   3 ?   -0.1   0.1       3.3   1.4e+03      51      66 ..     387     402 ..     372     424 .. 0.56

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.0025
  Syntaxin-6_N   8 eeVqkslnkaeslyrrwerlledtssstseeldetrteLrkalrsiewdledLeetvriveknpsk.f 74 
                   eeV +s++++++l++++++ +++ ++  +e +   ++ +++  +++++   d++ t++ +e + ++ +
    EPX70548.1 160 EEVLSSVDQLQALVTNFTDQQDELDE-LRERITMKEERIQQMREEASQRRHDFKSTIEYLEDSTTRlV 226
                   79999999999999999875666555.47777777788888888888888888888887777666544 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.12
  Syntaxin-6_N   1 DPFfevkeeVqkslnkaeslyrrw.erlledtsss...............................tseeldetrteLrkalrsiewdledLeetvr 65 
                   D Ff+v +e  ++l+ +e l +r  + l++ t+ +                                s el e + + r++l+  e ++e L++ v+
    EPX70548.1 250 DAFFNVCQERDEALSHIEVLEERLgKVLRSRTPVEngsingkhrsmvengsptltnvsyeshsrgkASRELPENHPQRRQTLEFYEIEIEVLRNKVE 346
                   7889999988888888888888884344444433257788888888888888888888877777776666666666666666666666666666666 PP

  Syntaxin-6_N  66 ivek............n 70 
                    +++            +
    EPX70548.1 347 SLQAdcdeksyyiselE 363
                   65553333333333330 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 3.3
  Syntaxin-6_N  51 rsiewdledLeetvri 66 
                   +++ + +++Le t++ 
    EPX70548.1 387 EKLLNRISELESTIEK 402
                   3333444455555532 PP

>> DUF501  Protein of unknown function (DUF501)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.4    0.0026       1.1      29     100 ..     131     207 ..     108     217 .. 0.75
   2 ?    0.6   0.1         1   4.5e+02      47      89 ..     354     395 ..     340     413 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.0026
      DUF501  29 ptlywLtcpelvkavsrL..Eaeglvkaleekl...aedeelaqalekahaeyaakReellteeerselekseesse 100
                  t +  t+++l+k+++ L  E++ + ++lee l   ++ ++l ++++ +++e  + Re++  +eer +  ++e s++
  EPX70548.1 131 STALTPTEKILQKRIEDLlfERQNHQQQLEEVLssvDQLQALVTNFTDQQDELDELRERITMKEERIQQMREEASQR 207
                 55556688999999998666999999999998744477888899****************97777766444444433 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 1
      DUF501  47 EaeglvkaleeklaedeelaqalekahaeyaakReellteeer 89 
                 E++ ++++le++l e   +  +++ +h+++a +Re+ll+++++
  EPX70548.1 354 EKSYYISELEARLSESGFTPSDMKPTHDSTA-EREKLLNRISE 395
                 7777999999999999999999999998765.57778766543 PP

>> FUSC  Fusaric acid resistance protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   4.9    0.0012      0.53     200     310 ..     141     272 ..     133     295 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0012
        FUSC 200 lealrsqaayesprirararalrrllsrmlallallsslarllarlraeeaaavpelaallaelaal.............eaaaaaealeaalaalrar 285
                 l++ ++ + +e ++++++ + + +   +++al++ +   +++l +lr++ ++ ++ ++++ +e+ +              + +++ e +e+++ +l+ +
  EPX70548.1 141 LQKRIEDLLFERQNHQQQLEEVLSSVDQLQALVTNFTDQQDELDELRERITMKEERIQQMREEASQRrhdfkstieyledSTTRLVESYEHRISELEFQ 239
                 677899999********************************************999**********999999988888776677777788888888888 PP

        FUSC 286 lralrrale........adadtaalllarlael 310
                 l+a++++ +        +++d a   ++ l e+
  EPX70548.1 240 LDAHSTDKQgdaffnvcQERDEALSHIEVLEER 272
                 877777777655555554444444444444444 PP

>> FAM76  FAM76 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   1.8    0.0083       3.5     209     292 ..     154     240 ..      96     248 .. 0.67
   2 ?    6.8   1.0    0.0087       3.7     197     283 ..     312     405 ..     257     420 .. 0.63

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0083
       FAM76 209 sldsnssdhlvavtqLkeeias...lkkqleqkdqellekdkkitelkaellekekelreklkelekeakekieklekkirellkev 292
                 +++++  + l  v qL+  +++    + +l++  + +  k+  i +++ e  + +++ ++ ++ le ++++ +e+ e++i+el  ++
  EPX70548.1 154 NHQQQLEEVLSSVDQLQALVTNftdQQDELDELRERITMKEERIQQMREEASQRRHDFKSTIEYLEDSTTRLVESYEHRISELEFQL 240
                 444455555555666665554411045556666678888888888888888888888888888888888888888888888887655 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0087
       FAM76 197 aeekesnetskk..sldsnssdhlvavtqLkeeiaslkkqleqkdqellekdkkitel.....kaellekekelreklkelekeakekieklek 283
                 ++ k+s+e  ++  +  ++     ++++ L+++++sl+   ++k   ++e +  ++e        + ++  +  rekl ++ +e +++iek++ 
  EPX70548.1 312 SRGKASRELPENhpQRRQTLEFYEIEIEVLRNKVESLQADCDEKSYYISELEARLSESgftpsDMKPTHDSTAEREKLLNRISELESTIEKMSL 405
                 2333333333331122223333348999***************************986222112344455666788888999999998888865 PP

>> DUF883  Bacterial protein of unknown function (DUF883)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   4.3    0.0008      0.34       3      70 ..     155     227 ..     153     230 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.0008
      DUF883   3 leaeleslladleellkeaa..deageeaeelRerl...eerlerarerlrdaeeavaerakeaaeaaddyVr 70 
                 +++ le++l+++++l        + ++e++elRer+   eer++++re++++ +++ +  ++   +++ + V+
  EPX70548.1 155 HQQQLEEVLSSVDQLQALVTnfTDQQDELDELRERItmkEERIQQMREEASQRRHDFKSTIEYLEDSTTRLVE 227
                 5666777776666665444311467899*******94445899*********************999999986 PP

>> Exonuc_VII_L  Exonuclease VII, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3  11.7     0.015       6.3     156     263 ..     141     247 ..     125     279 .. 0.36
   2 ?    6.3   0.3     0.014       6.1     138     250 ..     255     401 ..     250     420 .. 0.61

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.015
  Exonuc_VII_L 156 lekaikrll...eekkqrleklasrlkspee...llerkrqrldeleerleralkkqlkkkrerleelkerlkekleekkerlkklkerlelleekk 246
                   l+k i+ ll   ++++q+le++ s++ + ++    +++++++ldel+er++   ++++++ re+ ++ ++ +k+++e  ++++++      l+e+ +
    EPX70548.1 141 LQKRIEDLLferQNHQQQLEEVLSSVDQLQAlvtNFTDQQDELDELRERITM-KEERIQQMREEASQRRHDFKSTIEYLEDSTTR------LVESYE 230
                   3333333332222233333333333322222111233333333333333333.33333333333333333332112111111111......233333 PP

  Exonuc_VII_L 247 erleeleeklealsplk 263
                   +r++ele +l+a s +k
    EPX70548.1 231 HRISELEFQLDAHSTDK 247
                   33333333333333222 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.014
  Exonuc_VII_L 138 vvpdkaeleeqleelerrlekaikrll.............................eekkqrleklasrlkspeellerkrqrldeleerleralkk 205
                   v+++++e ++++e le+rl k ++++                              +++ +  ++l ++ ++ ++ le  + +++ l++++e+ l+ 
    EPX70548.1 255 VCQERDEALSHIEVLEERLGKVLRSRTpvengsingkhrsmvengsptltnvsyesHSRGKASRELPENHPQRRQTLEFYEIEIEVLRNKVES-LQA 350
                   567788888888888888888888777666666666666666666666665554433333334444444455666777788888888888888.888 PP

  Exonuc_VII_L 206 qlkkkrerleelkerl.k.....ekleekkerlkklkerlelleekkerle 250
                    +++k+  ++el++rl +     ++++ ++++++++++ l++++e ++++e
    EPX70548.1 351 DCDEKSYYISELEARLsEsgftpSDMKPTHDSTAEREKLLNRISELESTIE 401
                   888888888888888855777774444444444333333333333332222 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   5.1     0.021       8.8      54     121 ..     131     198 ..     125     206 .. 0.73
   2 ?    7.1   6.0     0.012       5.2      31     121 ..     148     237 ..     143     240 .. 0.73
   3 ?    1.1   0.0      0.89   3.8e+02      86     118 ..     335     367 ..     319     370 .. 0.83
   4 ?    0.2   0.0       1.7   7.1e+02      59      79 ..     384     404 ..     376     423 .. 0.80

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.021
     DUF1664  54 seslaatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeaveglesklerie 121
                 s++l+ t + L++ri+ +  + ++ ++  +e+ + v++++  ++++ ++ ++++e+ e + +k eri+
  EPX70548.1 131 STALTPTEKILQKRIEDLLFERQNHQQQLEEVLSSVDQLQALVTNFTDQQDELDELRERITMKEERIQ 198
                 5678999999*****99998888888888999999999998888887666655555555544444443 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.012
     DUF1664  31 lmfvTkrslsdavesvskqleqvseslaatkrhLssridrvdkkldeqkeiskeikeevtevredlse.igedvesvkeaveglesklerie 121
                 l+f  +++ ++ +e+v ++++q+++ +++  ++ ++++d++ +++   +e +++++ee ++ r+d ++ i+   +s  ++ve+ e++++++e
  EPX70548.1 148 LLF-ERQNHQQQLEEVLSSVDQLQALVTNFTDQ-QDELDELRERITMKEERIQQMREEASQRRHDFKStIEYLEDSTTRLVESYEHRISELE 237
                 555.47777788888888888887777666554.6788888888888888888888888888888765155555678889999999999887 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.89
     DUF1664  86 keevtevredlseigedvesvkeavegleskle 118
                 + e++ +r+++++++ d ++ +  +++le++l+
  EPX70548.1 335 EIEIEVLRNKVESLQADCDEKSYYISELEARLS 367
                 557889999999999999999999999999886 PP

  == domain 4  score: 0.2 bits;  conditional E-value: 1.7
     DUF1664  59 atkrhLssridrvdkkldeqk 79 
                 a +++L +ri ++++++++++
  EPX70548.1 384 AEREKLLNRISELESTIEKMS 404
                 567788888888888888775 PP

>> DUF4250  Domain of unknown function (DUF4250)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.2      0.35   1.5e+02      18      39 ..     178     199 ..     174     204 .. 0.90
   2 ?   -1.9   0.0         8   3.4e+03      21      43 ..     220     242 ..     217     243 .. 0.84
   3 ?    9.1   0.1    0.0028       1.2      16      47 ..     341     372 ..     339     375 .. 0.96

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.35
     DUF4250  18 Deyssldelcedldidkeelee 39 
                 D+ ++ldel e++ +++e +++
  EPX70548.1 178 DQQDELDELRERITMKEERIQQ 199
                 8999**************9976 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 8
     DUF4250  21 ssldelcedldidkeeleekLas 43 
                 +s   l+e+++   +ele +L++
  EPX70548.1 220 DSTTRLVESYEHRISELEFQLDA 242
                 67789999999999999988875 PP

  == domain 3  score: 9.1 bits;  conditional E-value: 0.0028
     DUF4250  16 LRDeyssldelcedldidkeeleekLasigYe 47 
                 LR + +sl++ c++     +ele++L++ g++
  EPX70548.1 341 LRNKVESLQADCDEKSYYISELEARLSESGFT 372
                 9*****************************96 PP

>> GAT  GAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.6     0.057        24      36      71 ..     141     176 ..     132     179 .. 0.77
   2 ?    7.6   7.0     0.011       4.6       7      72 ..     159     230 ..     153     234 .. 0.68

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.057
         GAT  36 mqpriqklieetadeedllaelLqlNDeLnnvlerY 71 
                 +q+ri +l+ e ++ ++ l+e L+  D+L+ +++ +
  EPX70548.1 141 LQKRIEDLLFERQNHQQQLEEVLSSVDQLQALVTNF 176
                 56777777766666666*************999876 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.011
         GAT   7 LsemLsste..pd...eellenellkeLyetckamqpriqklieetadeed.llaelLqlNDeLnnvlerYe 72 
                 L+e+Lss++  +    +  ++++ l+eL e++   ++riq++ ee +++      ++  l D+ ++++e Ye
  EPX70548.1 159 LEEVLSSVDqlQAlvtNFTDQQDELDELRERITMKEERIQQMREEASQRRHdFKSTIEYLEDSTTRLVESYE 230
                 6666666642211343334469***********************966554244455556788888888777 PP

>> ZapB  Cell division protein ZapB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   2.6     0.061        26      22      53 ..     140     171 ..     131     179 .. 0.86
   2 ?    6.1   7.2     0.035        15      13      58 ..     169     262 ..     167     277 .. 0.70
   3 ?    7.9   0.1    0.0096       4.1      19      65 ..     337     396 ..     336     404 .. 0.77

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.061
        ZapB  22 lLqmeieeLkeeneelkeenreleeeneqlke 53 
                  Lq++ie+L  e ++ +++ +e+ ++++ql++
  EPX70548.1 140 ILQKRIEDLLFERQNHQQQLEEVLSSVDQLQA 171
                 59***********************9999997 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.035
        ZapB  13 iqkaidtitlLqmeieeLkeeneelkeenreleeeneqlk................................................eereaw 58 
                  q+++++ t  q e++eL+e+    +e++++++ee +q +                                                +er + 
  EPX70548.1 169 LQALVTNFTDQQDELDELRERITMKEERIQQMREEASQRRhdfkstieyledsttrlvesyehriselefqldahstdkqgdaffnvcQERDEA 262
                 689999********************************99666666666655555555555555555555555555555555555555555555 PP

  == domain 3  score: 7.9 bits;  conditional E-value: 0.0096
        ZapB  19 titlLqmeieeLkeeneelkeenreleeeneqlk.............eereawqerlkkL 65 
                 +i+ L++++e L+++  e +  + ele+ +++               +ere++ +r++ L
  EPX70548.1 337 EIEVLRNKVESLQADCDEKSYYISELEARLSESGftpsdmkpthdstAEREKLLNRISEL 396
                 5899*****************999999555555555555555556668999998888776 PP

>> CALCOCO1  Calcium binding and coiled-coil domain (CALCOCO1) like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8  11.9     0.025        11      66     153 ..     150     237 ..     134     248 .. 0.82
   2 ?    2.0   0.0      0.17        73     385     405 ..     257     277 ..     254     296 .. 0.90
   3 ?    6.1   1.8      0.01       4.3      64     433 ..     327     405 ..     309     453 .. 0.60

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.025
    CALCOCO1  66 rdreeldrerkelesrveelkeelkesrekveeleekqkelerlseelaeeksalleakeesearirELEeDiktltqralekEteLe 153
                  +r++ +++ +e+ s+v++l++ +++ +++++el e ++ ++  +e +++ ++  ++ +++ ++ i  LE+    l +   ++  eLe
  EPX70548.1 150 FERQNHQQQLEEVLSSVDQLQALVTNFTDQQDELDELRERITMKEERIQQMREEASQRRHDFKSTIEYLEDSTTRLVESYEHRISELE 237
                 5788888899999999999999999999999999999999999999999999999999999999999999998888888777777776 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.17
    CALCOCO1 385 aekqElleyirqLEqrlekva 405
                 +e+ E l++i  LE+rl+kv 
  EPX70548.1 257 QERDEALSHIEVLEERLGKVL 277
                 7999**************996 PP

  == domain 3  score: 6.1 bits;  conditional E-value: 0.01
    CALCOCO1  64 ykrdreeldrerkelesrveelkeelkesrekveeleekqkelerlseelaeeksalleakeesearirELEeDiktltqralekEteLeRlkerakka 162
                 +++  e ++ e + l+++ve l+++  e    + ele++  e   +   ++  ++   +++e+  +ri ELE  i+ ++                    
  EPX70548.1 327 RRQTLEFYEIEIEVLRNKVESLQADCDEKSYYISELEARLSESGFTPSDMKPTHDST-AEREKLLNRISELESTIEKMS-------------------- 404
                 444445556666666666666666666666666666666666655555555554443.344555666666666666554.................... PP

    CALCOCO1 163 laqrkeeeaerkqlqakleqseeelrslskelqelrnslaerdtqvlqLqdtittltqkLttAqrkeaenEallkelrslqerlaaSerkvegLkeeLs 261
                                                                                                                    
  EPX70548.1   - ---------------------------------------------------------------------------------------------------   -
                 ................................................................................................... PP

    CALCOCO1 262 svaaqrdrtqaeLHqaRleaAqltlqLadasLalrEgrarWaqeretLqqsaeadkerieklsaelqkleealQeermereklevelgrekDcnrvqls 360
                                                                                                                    
  EPX70548.1   - ---------------------------------------------------------------------------------------------------   -
                 ................................................................................................... PP

    CALCOCO1 361 esrreLqElkaslrvaQkEkEqlqaekqElleyirqLEqrlekvadakWseaaltekeeaalelsaaarpdsa 433
                                                                                          
  EPX70548.1 405 ------------------------------------------------------------------------L 405
                 ........................................................................3 PP

>> BBP1_C  Spindle pole body component BBP1, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8  10.4   0.00074      0.32      74     155 ..     167     248 ..     137     317 .. 0.71
   2 ?    2.1   1.9      0.34   1.5e+02      95     155 ..     346     411 ..     308     441 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00074
      BBP1_C  74 qeLkkiskesldlqskianlekqlvdqaiekdreikkleeklldlelrnkeleekreidkikYesrikdLerqllereneik 155
                 ++L+++ ++  d q+++ +l++++  ++ + ++  ++ ++++ d + + + le    +   +Ye ri++Le ql ++++  +
  EPX70548.1 167 DQLQALVTNFTDQQDELDELRERITMKEERIQQMREEASQRRHDFKSTIEYLEDSTTRLVESYEHRISELEFQLDAHSTDKQ 248
                 55666666666999999999999954433333333444556666666666777667777779**************987755 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.34
      BBP1_C  95 kqlvdqaiekdreikkleeklldlelrnkele..ekreidkikYesrikdLe...rqllereneik 155
                 ++l +   ek   i++le +l+++  + ++++  +    ++ k   ri++Le   ++++++e +  
  EPX70548.1 346 ESLQADCDEKSYYISELEARLSESGFTPSDMKptHDSTAEREKLLNRISELEstiEKMSLHEDFET 411
                 445556677777888888888888888887762144567888888999999966655566655522 PP

>> Golgin_A5  Golgin subfamily A member 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2  15.6    0.0035       1.5      40     149 ..     136     241 ..     125     248 .. 0.78
   2 ?   -1.8   0.0         4   1.7e+03     256     275 ..     261     280 ..     247     286 .. 0.81
   3 ?    5.3   3.2     0.026        11      87     195 ..     309     415 ..     288     420 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0035
   Golgin_A5  40 esstalsaeldelkqerdllreelqklnqqieqlrtelqdleaqqqaeaeslreqlqeleeqleeerkakeeveaelerlkeelryleeelvrskatlq 138
                  ++++l++ +++l  er+  +++l+++ ++++ql++ + +  +qq  e ++lre+++  ee+++   + +ee+++  +  k  ++yle+  +r  ++++
  EPX70548.1 136 PTEKILQKRIEDLLFERQNHQQQLEEVLSSVDQLQALVTNFTDQQ-DELDELRERITMKEERIQ---QMREEASQRRHDFKSTIEYLEDSTTRLVESYE 230
                 456677888888888999999999999999999988888887766.889999999999998888...66677777777788888888888888888888 PP

   Golgin_A5 139 srikdrekeie 149
                 +ri + e +++
  EPX70548.1 231 HRISELEFQLD 241
                 88888887776 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 4
   Golgin_A5 256 kaassidkfsirlgifLrry 275
                 +a+s i+ +  rlg +Lr +
  EPX70548.1 261 EALSHIEVLEERLGKVLRSR 280
                 68899999999999999954 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.026
   Golgin_A5  87 eaeslreqlqeleeqleeerkakeeveaelerlkeelryleeelvrskatlqsrikdrekeieklrnqlttkslsssseselesRlkqLtesLiqKQtv 185
                 e++s  +  +el e+  + r++ e +e e+e l++++++l+ +   +k+ + s+++ r +e     ++++    s+++++ l +R+ +L es i+K  +
  EPX70548.1 309 ESHSRGKASRELPENHPQRRQTLEFYEIEIEVLRNKVESLQADCD-EKSYYISELEARLSESGFTPSDMKPTHDSTAEREKLLNRISEL-ESTIEKMSL 405
                 666666677888888888888899999999999999999999876.7888888888888888889999999999999999999999998.888999999 PP

   Golgin_A5 186 lEalstekns 195
                  E  +te  s
  EPX70548.1 406 HEDFETENPS 415
                 9999999865 PP

>> DUF4239  Protein of unknown function (DUF4239)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   4.8    0.0082       3.5      49     138 ..     149     240 ..     137     244 .. 0.75

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0082
     DUF4239  49 ftselerkeakali...adyvktivseerslvrasrgelslkasseltkLldllaevkgdassesaaveellseiaqltelRakRisdeaval 138
                 + +++++++  + +   +d+++ +v + ++  ++ ++el  + + + +++ ++ +e  + + +++   e l + +++l e   +Ris+++++l
  EPX70548.1 149 LFERQNHQQQLEEVlssVDQLQALVTN-FTDQQDELDELRERITMKEERIQQMREEASQRRHDFKSTIEYLEDSTTRLVESYEHRISELEFQL 240
                 445555344344330224566666665.455558888888888888899****************************************9987 PP

>> Med9  RNA polymerase II transcription mediator complex subunit 9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   5.4   0.00013     0.056      30      79 ..     154     203 ..     127     204 .. 0.84
   2 ?   -1.1   0.0       4.7     2e+03      38      67 ..     211     241 ..     207     244 .. 0.79
   3 ?   -0.8   0.1       3.8   1.6e+03      48      70 ..     327     349 ..     313     367 .. 0.60

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 0.00013
        Med9  30 elrhkLkkarelirelpgidrsveeqeaeieeleeqlakKrelLkkyknr 79 
                 + +++L+++ + +++l+ +  +  +q++e++el+e++++K+e +++ +++
  EPX70548.1 154 NHQQQLEEVLSSVDQLQALVTNFTDQQDELDELRERITMKEERIQQMREE 203
                 5578899999************************************9986 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 4.7
        Med9  38 arelirelpg.idrsveeqeaeieeleeqla 67 
                 +++ i+ l++   r ve+ e +i ele ql+
  EPX70548.1 211 FKSTIEYLEDsTTRLVESYEHRISELEFQLD 241
                 6788888888777888888999999988876 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 3.8
        Med9  48 idrsveeqeaeieeleeqlakKr 70 
                    + e  e eie l+++++  +
  EPX70548.1 327 RRQTLEFYEIEIEVLRNKVESLQ 349
                 45555555555555555555443 PP

>> TBCA  Tubulin binding cofactor A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1       6.4   2.7e+03      68      78 ..     156     166 ..     138     189 .. 0.52
   2 ?    7.4   3.0     0.013       5.6      23      66 ..     191     235 ..     180     252 .. 0.76
   3 ?    7.0   1.7     0.017       7.2      16      53 ..     332     369 ..     329     414 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 6.4
        TBCA  68 vekLeelleee 78 
                  ++Lee+l++ 
  EPX70548.1 156 QQQLEEVLSSV 166
                 33333333332 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.013
        TBCA  23 eeqearleklkadgdedeydlkkqeevleetk.amipdlkkrlek 66 
                   +e+r+++++++ ++  +d k   e le++  ++++  + r+++
  EPX70548.1 191 TMKEERIQQMREEASQRRHDFKSTIEYLEDSTtRLVESYEHRISE 235
                 5689********99888************9761566666666654 PP

  == domain 3  score: 7.0 bits;  conditional E-value: 0.017
        TBCA  16 asYekEleeqearleklkadgdedeydlkkqeevleet 53 
                 ++Ye E+e  ++++e+l+ad de  y + + e  l e+
  EPX70548.1 332 EFYEIEIEVLRNKVESLQADCDEKSYYISELEARLSES 369
                 58*******************998****9999999998 PP

>> Fib_alpha  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   7.4     0.022       9.3      58     130 ..     142     209 ..     123     214 .. 0.77
   2 ?    1.4   0.2      0.77   3.3e+02      28      96 ..     206     272 ..     199     285 .. 0.60
   3 ?    5.1   0.2     0.055        23      36      99 ..     337     402 ..     323     435 .. 0.78

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.022
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Fib_alpha  58 vkeikdslrekqkskkdndnvikksskeleeeilrlketidaqesnirvLqnvlesneqkiqkLeqdidqker 130
                  k+i+d l e+q++    ++ ++++ ++++ + + l  + ++q  ++ +L++ +  +e++iq+++++ +q+++
  EPX70548.1 142 QKRIEDLLFERQNH----QQQLEEVLSSVD-QLQALVTNFTDQQDELDELRERITMKEERIQQMREEASQRRH 209
                 34455555555544....557888888999.8999999999999********************999998876 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.77
                 CCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH..HHHHHHHHHHHHHCCCHHHHH CS
   Fib_alpha  28 kyekdvkkdlekleneleeisnstkeaeelvkeikdslrekqkskkdn..dnvikksskeleeeilrlket 96 
                 + ++d+k ++e le++ +++ +s    e+ ++e++ +l ++ + k++    nv ++  + l  +i+ l+e+
  EPX70548.1 206 QRRHDFKSTIEYLEDSTTRLVES---YEHRISELEFQLDAHSTDKQGDafFNVCQERDEALS-HIEVLEER 272
                 55667777777777765555444...344455555555544444444333667777777777.77776665 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.055
                 HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHHHHHHHCCCHHHHHHHC CS
   Fib_alpha  36 dlekleneleeisnstkeaeelvkeikdslrekqkskkdn...dnvikksskeleeeilrlketida 99 
                 ++e l+n++e+++    e + +++e++  l e   + +d       + + +k l+ +i++l+ ti +
  EPX70548.1 337 EIEVLRNKVESLQADCDEKSYYISELEARLSESGFTPSDMkptHDSTAEREKLLN-RISELESTIEK 402
                 6889999999999999999999999999998876555543232555555555555.88888888864 PP

>> DUF3450  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7  12.7    0.0011      0.47      29      99 ..     135     205 ..     116     246 .. 0.89
   2 ?   -0.1   0.6       1.1   4.8e+02      49      82 ..     334     367 ..     296     401 .. 0.69
   3 ?   -1.4   0.0       2.7   1.1e+03      42      65 ..     382     405 ..     377     412 .. 0.75

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.0011
     DUF3450  29 vaaaaqsqkkidklddekqellaeyralkeeleslevyneqlerlvasqeqeiasleeqieeieeierelv 99 
                 + +++  qk+i++l  e+q+++++++++ + +++l++   + +++++++++ +++++ + e+i+++++e +
  EPX70548.1 135 TPTEKILQKRIEDLLFERQNHQQQLEEVLSSVDQLQALVTNFTDQQDELDELRERITMKEERIQQMREEAS 205
                 5678889************************************************************9876 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 1.1
     DUF3450  49 llaeyralkeeleslevyneqlerlvasqeqeia 82 
                 ++ e++ l++++esl++  ++ + +++++e++++
  EPX70548.1 334 YEIEIEVLRNKVESLQADCDEKSYYISELEARLS 367
                 3456777777777777777777777777666665 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 2.7
     DUF3450  42 lddekqellaeyralkeeleslev 65 
                 ++ e+++ll+++ +l++ +e++++
  EPX70548.1 382 STAEREKLLNRISELESTIEKMSL 405
                 567788888888888888887765 PP

>> Flagellin_N  Bacterial flagellin N-terminal helical region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   1.0    0.0035       1.5      53     118 ..     111     175 ..     101     197 .. 0.75
   2 ?    1.4   0.6      0.75   3.2e+02      55     103 ..     167     215 ..     161     254 .. 0.59
   3 ?   -1.1   0.1       4.4   1.9e+03     100     128 ..     381     409 ..     375     413 .. 0.73

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0035
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHT-TTTS-SHHHHHHHHHHHHHHH CS
  Flagellin_N  53 qiaglsqlvrnnslgisrlqtaqgalselsdilqr.lkelavaasndsnsdedrqslqaelqqLtde 118
                  +i +l+++  nn++ i+ +  + +al+  ++ilq+ +++l+  ++n++++ e+  s  ++lq+L+ +
   EPX70548.1 111 AIPRLTAFPPNNNININSI--SSTALTPTEKILQKrIEDLLFERQNHQQQLEEVLSSVDQLQALVTN 175
                  5666777777777777766..5679************************999555555555555433 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.75
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TTTS-S CS
  Flagellin_N  55 aglsqlvrnnslgisrlqtaqgalselsdilqrlkelavaasndsnsde 103
                  ++l++lv+n ++ ++ l+  +++++  ++ +q+++e a ++  d +s++
   EPX70548.1 167 DQLQALVTNFTDQQDELDELRERITMKEERIQQMREEASQRRHDFKSTI 215
                  5555555555555555555555555555555666655555555555544 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 4.4
                  TS-SHHHHHHHHHHHHHHHHHHHHHH-EE CS
  Flagellin_N 100 nsdedrqslqaelqqLtdelnrianttsf 128
                   s+ +r++l +++++L +++++ + + +f
   EPX70548.1 381 DSTAEREKLLNRISELESTIEKMSLHEDF 409
                  56778889999999999999877655555 PP

>> Seryl_tRNA_N  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   4.7     0.014       5.8      30      98 ..     144     212 ..     135     222 .. 0.85
   2 ?    1.8   0.2      0.66   2.8e+02      42      67 ..     342     370 ..     329     408 .. 0.46

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.014
                   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCTTS-TCCCCCCCHHHHHHHHHHHHHHHHHHHHHH CS
  Seryl_tRNA_N  30 elleldekrrelqveleelqaerNelskeIgkakkkkedaeeliaevkelkeelkaleaelkeleaele 98 
                   ++ +l  +r+++q++lee+ +   +l++ + +  +++++ +el++++    e+++++ +e ++ + +++
    EPX70548.1 144 RIEDLLFERQNHQQQLEEVLSSVDQLQALVTNFTDQQDELDELRERITMKEERIQQMREEASQRRHDFK 212
                   566777799999999999999999999999999999999999999999999999999999888776665 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.66
                   HHHHHHHHHHHHHHHHHCCCCCCTT...S CS
  Seryl_tRNA_N  42 qveleelqaerNelskeIgkakkkk...e 67 
                   ++++e+lqa   e s  I+++ ++     
    EPX70548.1 342 RNKVESLQADCDEKSYYISELEARLsesG 370
                   55555555555555555555544442221 PP

>> HemX  HemX, putative uroporphyrinogen-III C-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   7.5    0.0032       1.4      32     115 ..     154     239 ..     142     273 .. 0.80
   2 ?   -0.7   0.1       1.6     7e+02      64      98 ..     334     368 ..     302     391 .. 0.61
   3 ?   -0.2   0.1       1.1   4.9e+02     173     224 ..     386     438 ..     379     444 .. 0.75

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0032
        HemX  32 eltaevaelqqqlaaleqqlaqveaekeqkqeleerlqqlaeklealekeleqlqkqleelqqqlskvsga..erkdWlLaeAdfL 115
                 +++++ +e+ + + +l++ +++++ ++ + +el er+  ++e++++ ++e +q  ++ +++ + l++   +  e+ + +++e +f 
  EPX70548.1 154 NHQQQLEEVLSSVDQLQALVTNFTDQQDELDELRERITMKEERIQQMREEASQRRHDFKSTIEYLEDSTTRlvESYEHRISELEFQ 239
                 23445567777777777777778888888899999999999999999999999999988888888876666667777777777775 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 1.6
        HemX  64 leerlqqlaeklealekeleqlqkqleelqqqlsk 98 
                  e +++ l +k+e+l++  ++++  ++el+++ls+
  EPX70548.1 334 YEIEIEVLRNKVESLQADCDEKSYYISELEARLSE 368
                 23344444555555555555555555555555554 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 1.1
        HemX 173 rdgiilrLeqLanqvdeLpladneldeapsdadn.aelsdslsdWkqnleksa 224
                 r+ ++ r+++L+ ++++++l ++   e+ps+ ++  e sd  + W +  e s 
  EPX70548.1 386 REKLLNRISELESTIEKMSLHEDFETENPSSLNKiPEDSDHNTVWCEVCENSS 438
                 56677889999999999999888888877776552578888888887777765 PP

>> TMPIT  TMPIT-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   3.8     0.006       2.6       2      84 ..     157     213 ..     126     258 .. 0.51
   2 ?    3.0   0.5      0.12        49       6      85 ..     319     403 ..     314     426 .. 0.71

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.006
       TMPIT   2 eeweelekefkeleetakeykqkleelsklqskcskeikkqkkrlkelksslkklkksvkeeeeeeveelkeelkerkkvlke 84 
                 +++ee+ +++++l++  ++++ + +el +l ++++ +++                          ++++++ee ++r++ +k+
  EPX70548.1 157 QQLEEVLSSVDQLQALVTNFTDQQDELDELRERITMKEE--------------------------RIQQMREEASQRRHDFKS 213
                 223333333333333333333333333333333333333..........................333333333333333333 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.12
       TMPIT   6 elekefkeleetakeykqkleelsklqskcskeikkqkkrlkelksslkklkksvk.....eeeeeeveelkeelkerkkvlkev 85 
                 el +++ + ++t + y+ ++e l +  ++++ + +++++ ++el+++l++   + +     +++  e e+l ++++e +++++++
  EPX70548.1 319 ELPENHPQRRQTLEFYEIEIEVLRNKVESLQADCDEKSYYISELEARLSESGFTPSdmkptHDSTAEREKLLNRISELESTIEKM 403
                 5556666666777788888888888889999999999999999999988876553344454445555666666666666666655 PP

>> Spectrin  Spectrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   8.0    0.0086       3.7      21     104 ..     156     237 ..     135     238 .. 0.76
   2 ?    1.0   0.1       1.4   5.9e+02       4      34 ..     346     377 ..     318     404 .. 0.52
   3 ?    1.2   0.2       1.2   5.3e+02       7      59 ..     349     402 ..     343     420 .. 0.52

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0086
                 HHHHCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Spectrin  21 eellssedlgkdleevqallkkhkaleaelaaqqervkalnelaeklldeghsaseeieerleelnerWeeLkelaaerkqkLe 104
                 +++l  e++ ++++++qal++ +++ ++el++ +er++  +e  +++ +e  +   + ++++e l++    L e  + r  +Le
  EPX70548.1 156 QQQL--EEVLSSVDQLQALVTNFTDQQDELDELRERITMKEERIQQMREEASQRRHDFKSTIEYLEDSTTRLVESYEHRISELE 237
                 3444..555677788888888888888888888888888889999998888999999999999999999999999999988886 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 1.4
                 HHHHHHHHHHHHHHHHHHHHHCCSSC.SSSHH CS
    Spectrin   4 qqfaqdadeleeWieekeellssedl.gkdle 34 
                 + ++ d+de    i+e e+ ls+  + ++d+ 
  EPX70548.1 346 ESLQADCDEKSYYISELEARLSESGFtPSDMK 377
                 33444444444444444444433333344443 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 1.2
                 HHHHHHHHHHHHHHHHHHCCSSC.SSSHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Spectrin   7 aqdadeleeWieekeellssedl.gkdleevqallkkhkaleaelaaqqervka 59 
                 + d+de    i+e e+ ls+  + ++d+  + +   + + l + +++ +  +++
  EPX70548.1 349 QADCDEKSYYISELEARLSESGFtPSDMKPTHDSTAEREKLLNRISELESTIEK 402
                 555555555555555555444333555554444444444444444444444443 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1  11.0      0.24     1e+02     103     171 ..     140     211 ..     135     414 .. 0.60

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.24
     DUF4407 103 iFekeIdaelaeeqqeeakelkeqlaaa.....ltaelaeleaqiaalqaeidaaearldalraeaqkeldgtk 171
                 i +k I+  l+e+q+ + ++l+e l +      l +  ++ ++++++l++ i+ +e+r+++ r+ea +  +  +
  EPX70548.1 140 ILQKRIEDLLFERQNHQ-QQLEEVLSSVdqlqaLVTNFTDQQDELDELRERITMKEERIQQMREEASQRRHD-F 211
                 55666666555554444.445455553333344445555555555566666666666666666666654443.2 PP

>> Fez1  Fez1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8  11.7     0.083        35      25     108 ..     154     245 ..     140     286 .. 0.51
   2 ?    7.6   1.7     0.011       4.7      48     141 ..     311     404 ..     290     420 .. 0.78

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.083
        Fez1  25 evtqklseivalkaqlrelrakleekeeeikeleesleektlelevcenelqrk....kseaellrekvekl....eeelkelreelselsl 108
                 +  q+l+e+++   ql+ l ++ +++++e++el+e+++ k++ ++++ +e +++    ks+ e l++ +++l    e+ ++el  +l ++s+
  EPX70548.1 154 NHQQQLEEVLSSVDQLQALVTNFTDQQDELDELRERITMKEERIQQMREEASQRrhdfKSTIEYLEDSTTRLvesyEHRISELEFQLDAHST 245
                 34566777777777777777777777777777777777777777777777666545553344444443333300002223333333322222 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.011
        Fez1  48 eekeeeikeleesleektlelevcenelqrkkseaellrekvekleeelkelreelselsleeeeaalesdeakaqrqeaeeleelkreverlr 141
                 +++ ++ +el e+  ++ + le +e e++  ++++e l+   ++ +  ++el  +lse+  + ++++ + d++ ++++  ++++el++++e++ 
  EPX70548.1 311 HSRGKASRELPENHPQRRQTLEFYEIEIEVLRNKVESLQADCDEKSYYISELEARLSESGFTPSDMKPTHDSTAEREKLLNRISELESTIEKMS 404
                 5666778888888888999999999999999999999998899999999999999998887777777677766666666778888888888875 PP

>> Lebercilin  Ciliary protein causing Leber congenital amaurosis disease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3  11.3      0.13        55     112     186 ..     155     229 ..     133     236 .. 0.80
   2 ?    8.1   0.8    0.0045       1.9      65     135 ..     334     402 ..     325     407 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.13
  Lebercilin 112 edknLaereeLqkkLeeleakleekeekikeLerkleleeksfrrqlaaekkktkeaqeevkalqeeierlkqkl 186
                  +++L+e      +L++l +++ +++ +++eL+ ++ ++e+  +++ +  +++ ++ +++++ l++  +rl ++ 
  EPX70548.1 155 HQQQLEEVLSSVDQLQALVTNFTDQQDELDELRERITMKEERIQQMREEASQRRHDFKSTIEYLEDSTTRLVESY 229
                 567888888888889999999999999999999999999999999999999999999999999888888886655 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.0045
  Lebercilin  65 hneEvrvlrerlRksqekerelekklkekeaellrlkdklkklkkLsedknLaereeLqkkLeeleaklee 135
                  + E++vlr+++  +q+ ++e +  + e ea+l +   + +++k    d + aere+L ++++ele+++e+
  EPX70548.1 334 YEIEIEVLRNKVESLQADCDEKSYYISELEARLSESGFTPSDMKPTH-D-STAEREKLLNRISELESTIEK 402
                 56799999999999999999999999999999999999999998766.4.456999999999999999986 PP

>> PCRF  PCRF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   9.4     0.031        13      18      90 ..     153     226 ..     139     288 .. 0.77
   2 ?    3.2   0.3      0.17        71       6      57 ..     360     409 ..     319     454 .. 0.63

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.031
                 TTTGGGSSSTTHHHHHTHHHHHHHHHHHHHTTTHHH...HT.....-S-..-GGGTHHHHHHHHHH..HHHHHT CS
        PCRF  18 wedqekakklskelaeleeivealeeleealedleeakelle.edeelaelaeeeleelekeleeleeelkklL 90 
                 +++q++++++ +++ +l+++v+++++ +++l++l+e  ++ e + ++++e+a++  +++++++e le++ ++l 
  EPX70548.1 153 QNHQQQLEEVLSSVDQLQALVTNFTDQQDELDELRERITMKEeRIQQMREEASQRRHDFKSTIEYLEDSTTRLV 226
                 45678888999999999999999999999999888855554223356777777778888888888865555443 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.17
                 TTTTTST.-GGGTTTGGGSSSTTHHHHHTHHHHHHHHHHHHHTTTHHH...H CS
        PCRF   6 eelekklsdpevwedqekakklskelaeleeivealeeleealedleeakel 57 
                 +ele++ls++ ++  ++++k +  + ae e+++++++ele++ e+++  +++
  EPX70548.1 360 SELEARLSESGFT--PSDMKPTHDSTAEREKLLNRISELESTIEKMSLHEDF 409
                 3444444444444..3344445555555555555555555555444443333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (459 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1848  (0.103073); expected 358.6 (0.02)
Passed bias filter:                      800  (0.0446204); expected 358.6 (0.02)
Passed Vit filter:                       168  (0.00937029); expected 17.9 (0.001)
Passed Fwd filter:                        76  (0.00423894); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              42  [number of targets reported over threshold]
# CPU time: 1.21u 0.40s 00:00:01.61 Elapsed: 00:00:00.58
# Mc/sec: 2369.30
//
Query:       EPX70549.1  [L=473]
Description: glucose-6-phosphate 1-dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      4e-80  269.1   0.0    5.9e-80  268.6   0.0    1.2  1  G6PD_C    Glucose-6-phosphate dehydrogenase, C-terminal domai
    4.8e-50  170.6   0.3    8.8e-50  169.8   0.3    1.5  1  G6PD_N    Glucose-6-phosphate dehydrogenase, NAD binding doma
  ------ inclusion threshold ------
       0.13   11.8   0.1       0.13   11.8   0.1    1.8  2  DUF4249   Domain of unknown function (DUF4249)


Domain annotation for each model (and alignments):
>> G6PD_C  Glucose-6-phosphate dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  268.6   0.0   9.9e-84   5.9e-80       2     285 ..     187     468 ..     186     471 .. 0.93

  Alignments for each domain:
  == domain 1  score: 268.6 bits;  conditional E-value: 9.9e-84
                 HHHHS-S.TTSTTSSTTTEEEEEEEEEESS--TTTHHHHTTTHHHHHTTTTHHHHHHHHHH----SSSSHHHHHHHHHHHHTTB----G...GG.EEEE CS
      G6PD_C   2 vlRfaNa.lfeplwnrnyidhvqitvketlgvegrggYydeaGalrDvvqnHllqllalvamepPasldaedirdekvkvLkslrplkleevekkvvrG 99 
                 +lRfaN   +++l+n+++i++v+i++ e+ g++gr gYyd  G++rDv+qnH+ q++++ am++P+s +++d+r ekvkvLk+ ++ +l   ++ +++G
  EPX70549.1 187 TLRFANPhSLDALLNNQHIKSVNISMWESGGCDGRVGYYDINGVVRDVLQNHMAQVFTVAAMDEPKSGSPDDVRYEKVKVLKATSHATL---KD-TLLG 281
                 59****8689****************************************************************************998...66.9*** PP

                 EE.....E--TGS-STTSTTS-TT----SEEEEEEEB-STTTTT-EEEEEEESSBSS-EEEEEEEE---SS-SS.---.--EEEEEEESS-EEEEEEEE CS
      G6PD_C 100 qYaagavkgkevkgYreeegvakdSkteTfvalkleidnerwagVPfylrtGKrLnekkteiriqfkkvpsdlf.kkkerneLviriqpdeaislklna 197
                 qY    v g+ + gY++ egv+k+Sk  T+va++l++dnerw+gVPf++ +GK L++ ++eir  +k  +s +f ++++   + +++qp++++ l+  a
  EPX70549.1 282 QY----VAGNGKGGYKDLEGVPKESKATTYVATTLFVDNERWKGVPFVFDSGKSLEQGRVEIRYYLKGKESGIFsDTDQDHYISFSVQPNQEVVLTAFA 376
                 **....778889**************************************************************65555999************99998 PP

                 E-SSS.E.....EEEEEEHHHHTT.....---HHHHHHHHHHHT-GTTSB-HHHHHHHHHHHHHHHHHHHH---EEEETTSSS-HHHHHHHHHH CS
      G6PD_C 198 kkpgl.eleleeveldlsykerfk.....lpeaYerLlldvlkgdqtlFvrsdeveaaWkivdpileaweeeklekYeagsrgPeeadellekd 285
                  kp + + ++ ++ l+l++ke+f      +++aYe L+ d++kgd t+Fvr+deve aW+i+d+il++   +++ +Y+ags+gP+ea+e+l+++
  EPX70549.1 377 NKPMSsARTCVNAALNLNFKEQFAeemkqKRDAYEILFEDAIKGDPTKFVRDDEVEYAWRIFDEILDSP--NEPLPYAAGSTGPKEAEEYLKSH 468
                 88877344566899999999888778878899*************************************..4589***************9876 PP

>> G6PD_N  Glucose-6-phosphate dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  169.8   0.3   1.5e-53   8.8e-50       1     177 []       5     184 ..       5     184 .. 0.91

  Alignments for each domain:
  == domain 1  score: 169.8 bits;  conditional E-value: 1.5e-53
      G6PD_N   1 vifGasGdLakrkllPaLyelaregllp.eevrivgvarsklsdeefrekvkealkkekekeeldeekleeflkrleyvsgdleeeeeyekLkekleel 98 
                 ++fGasG+La++k++PaL++l++++ ++ +++ ++g+arskls+ +fr+++k+++k e+     ++++++ef++r++y++g++++e++++++++ l +l
  EPX70549.1   5 IVFGASGHLAHQKTFPALFNLFAKNYVErQSFYVIGYARSKLSEPDFRNSLKDYIKPEQ----EQAKVYDEFINRVTYFTGQYDQEDSFKEFSKYLGNL 99 
                 79***********************9962679***********************5333....35689************************9999998 PP

      G6PD_N  99 ea.......nrlfYlavppslfeevaeklkkaglakeeewkrvvvEKPfGkdlesarelneelkkvfkeeqiyrIDhYLGketvqN 177
                 e+        r+fYla+pps++ +v + ++++     ++++r+++EKPfGkd++s+ +l+++l+k ++e++iyrIDhYL+k+++ N
  EPX70549.1 100 EKntdqakgLRVFYLALPPSAYVSVGNFIHDHVYL-PNGKTRMIIEKPFGKDYDSSIQLKKDLHKKWNEDEIYRIDHYLAKDMIIN 184
                 8344455569*********************8555.5899*******************************************987 PP

>> DUF4249  Domain of unknown function (DUF4249)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.5      0.53   3.1e+03     169     221 ..      50      83 ..      27     121 .. 0.48
   2 ?   11.8   0.1   2.3e-05      0.13      75     150 ..     345     417 ..     300     464 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 0.53
     DUF4249 169 efskvlnlast.psrsddsdsefldtelsgdklskykpigfipfdDskfngkey 221
                 +f++ l+   + ++++ +  +ef++  ++++                      y
  EPX70549.1  50 DFRNSLKDYIKpEQEQAKVYDEFINRVTYFTGQ--------------------Y 83 
                 334444433333333333333444443333333....................2 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 2.3e-05
     DUF4249  75 gqey.elsetkagyyssfrlkpgdtyrLeittpdgkeyvsaettvpspppeidtvsaeestedne..egyeitvdlkDp 150
                 g+e   +s+t +++y sf ++p++ + L++ + + k+ +sa t v ++   + +++ ++ +e ++  + yei +  +D+
  EPX70549.1 345 GKESgIFSDTDQDHYISFSVQPNQEVVLTAFA-N-KPMSSARTCVNAALN-L-NFKEQFAEEMKQkrDAYEILF--EDA 417
                 2222389988889*******************.5.8**********9996.5.8888887777778899***99..885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (473 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       600  (0.0334653); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.40s 00:00:01.06 Elapsed: 00:00:00.56
# Mc/sec: 2531.97
//
Query:       EPX70550.1  [L=201]
Description: ubiquitinated histone-like protein Uhp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.4e-05   23.7   0.0    4.7e-05   23.2   0.0    1.2  1  FMN_red       NADPH-dependent FMN reductase
     0.0062   16.7   0.3      0.027   14.7   0.3    2.1  1  Flavodoxin_1  Flavodoxin


Domain annotation for each model (and alignments):
>> FMN_red  NADPH-dependent FMN reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.0   5.2e-09   4.7e-05      58     144 ..      56     143 ..      12     153 .. 0.71

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 5.2e-09
                 GGSHHHHHHHHHHHH-SCEEEEEEECTTCE-HHHHHHHHCHT-.SSCHCCTT-EEEEEEE-SSTTTTHHHHHHHHHHHH.HTT-EEEE CS
     FMN_red  58 qtsddvaellekiaaadaliivtPeYngsysgllKnalDrlsrtrgkkelrgKpvalvavgggrrgglraeeqlrqvla.elgaivvp 144
                 +++    + ++ +++ da++++ P+  g++ +++ +++D ++  + + el+gK+++ +   g++ gg++++         ++g+i+vp
  EPX70550.1  56 KKPNYPVATTDILTKYDAFLFGYPTRYGTPCAQFRAFWDATGGLWARGELHGKYFGQFFSTGTQGGGQETTGLTALTSFvHHGMIYVP 143
                 355666788999*******************************************988666677777776654443333378888887 PP

>> Flavodoxin_1  Flavodoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.3     3e-06     0.027       1      44 [.       8      49 ..       8     136 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 3e-06
                  EEEETSSSHHHHHHHHHHHHHHHTTTEEEEEEEEGTTSCGGGGG CS
  Flavodoxin_1  1 ilYgSetGnteklAkqlaeelgehgfnadvvslsdydeslseie 44
                  il++S++G+  +lA++ +++++++g +a ++++ ++  +  ei 
    EPX70550.1  8 ILFYSTYGHVAQLAEAEKRGIEAAGGKAVIYQIPEILSD--EIL 49
                  89******************************9998743..554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       330  (0.0184059); expected 358.6 (0.02)
Passed bias filter:                      284  (0.0158403); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.34s 00:00:00.90 Elapsed: 00:00:00.55
# Mc/sec: 1108.57
//
Query:       EPX70551.1  [L=933]
Description: fun thirty like protein Fft3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-51  175.4   0.0    2.3e-51  174.6   0.0    1.4  1  SNF2_N         SNF2 family N-terminal domain
    2.6e-17   63.2   1.3    2.9e-15   56.5   0.1    3.1  3  Helicase_C     Helicase conserved C-terminal domain
    1.9e-10   41.0   0.0      6e-10   39.4   0.0    1.9  2  ResIII         Type III restriction enzyme, res subunit
    3.4e-05   23.2   0.3    8.1e-05   22.0   0.3    1.5  1  ERCC3_RAD25_C  ERCC3/RAD25/XPB C-terminal helicase


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  174.6   0.0   5.2e-55   2.3e-51      53     349 ..     414     705 ..     380     706 .. 0.89

  Alignments for each domain:
  == domain 1  score: 174.6 bits;  conditional E-value: 5.2e-55
                 HTT--EEE---TTS--HHHHHHHHH...HHTTTS---.......S-EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH----------------- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  53 qsvrGGiLaDemGLGKTvqvlalilaqrakeekdkekkrkdtlagptLivvPaslldqWeneierhvsssalrvlvyggqkkmkkkntkvapklladyd 151
                 +    GiLaDemGLGKT q++a+ +      +        +++ gp+L+++Pas++++W +e+++++++ +++ +++++ +  +++ ++  +     y+
  EPX70551.1 414 ELKLAGILADEMGLGKTCQTIAFFA---LLMD--------KNVNGPHLVIAPASTMENWLREFAKFCPKLKIELYYGSQVE--REEIRERINSNKDSYN 499
                 55678******************99...3222........34679***************************999999997..4444577788889*** PP

                 EEEE-HHHHHHHT......TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHHHHHHH-TTTT--.HHHHHHHTHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxx RF
      SNF2_N 152 vvittYdvlsreaelqkkrsvlkqvewkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledlygLlkfLreepfge.kqtfdkllqrpi 249
                 v++ttY   ++ +   + r  l +++ +  + DEgh lkn +s+ +  + ++ ++ r++ltGTP+qn+l++l++Ll+f+ + +f+   ++ d  ++ + 
  EPX70551.1 500 VMLTTYRLAATSK---ADRLFLRNQKFNVCIYDEGHYLKNRASERYRHLMSIPADFRVLLTGTPLQNNLKELISLLAFILPHVFDYgLKSLDVIFTMKK 595
                 ******9999777...7889999999999999*****************************************************99999999999888 PP

                 H........HHHHHHHHHHHTT-STTEE---GGGT--S---EEEEEEEEE--HHHHHHHH....................HHHHHH-HH.H-....HHH CS
                 x........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xx....xxx RF
      SNF2_N 250 e........aqaekgrsrLlqllqrlmlrrakkdveknlPpkteeiiflklskverksYnrllevlrkkalakllkrseaalksssksk.ek....ile 335
                            +e+++sr   ++++++lrr k++v   lP+kt  i f+++s++e+k Y+   e++ k+ ++ ll +++++++ +++ + +k       
  EPX70551.1 596 SpesdferaLLSEQRVSRAKMMMAPFVLRRKKSQVLDALPKKTRIIEFCEFSEEEKKRYE---EFANKQSVNNLLDENVMKTNLDTNANlAKkkstAGF 691
                 88889989888999999******************99***********************...9999999**********9999998887778998445 PP

                 HHHHHHHHHH---X CS
                 xxxxxxxxxxxxxx RF
      SNF2_N 336 lllelrqacnhpql 349
                  l +lr+   hp l
  EPX70551.1 692 VLVQLRKLADHPML 705
                 67788888888866 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0     0.012        55      14      73 ..     444     504 ..     432     511 .. 0.68
   2 ?   -3.1   0.0       2.2     1e+04      15      31 ..     636     652 ..     609     679 .. 0.58
   3 !   56.5   0.1   6.6e-19   2.9e-15       4     111 .]     775     885 ..     772     885 .. 0.91

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.012
                 TTTSEEEEEESSHHHHHHHHHHHHHT..TSTEEEESTTSTHHHHHHHHHHHH..TTSSSEEEES CS
  Helicase_C  14 eeggkilifvntidrlekvklllekk..gikvavlhgelpqnereeileqfn..kgesdvLiat 73 
                 +++g  l++++  ++ + ++ +  k+  ++k+  ++g  +q ereei e+ n  k++++v+++t
  EPX70551.1 444 NVNGPHLVIAPASTMENWLREF-AKFcpKLKIELYYG--SQVEREEIRERINsnKDSYNVMLTT 504
                 5555555555555533222333.23466899999999..9***********9777889988887 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 2.2
                 TTSEEEEEESSHHHHHH CS
  Helicase_C  15 eggkilifvntidrlek 31 
                 ++ +i+ f+++ ++ +k
  EPX70551.1 636 KKTRIIEFCEFSEEEKK 652
                 34444444444443322 PP

  == domain 3  score: 56.5 bits;  conditional E-value: 6.6e-19
                 HHHHHHH.HHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH.TTSSS.EEEESGGGTSSSTSTTESEEEESSSSSSHHH CS
  Helicase_C   4 eallell.kleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfn.kgesd.vLiatdvaerGidipkvnlVinfdlprnvts 99 
                 ++l+ +l +  ++g++i++f+++++ l+ ++l+ ++ ++k+++++g+++ + r++ ++qf  +++++ +L++t++++ Gi++ ++n+Vi +d+ +n+ +
  EPX70551.1 775 RKLKTILeNAIAKGDRIVLFSQFTQVLDILQLVMKSMNLKFLRFDGSTQVDFRQDLIDQFYaDESINvFLLSTKAGGFGINLACANMVILYDVSFNPFD 873
                 5566666666799************998889998888***********************95677889******************************* PP

                 HHHHHTTSSSTT CS
  Helicase_C 100 yiqriGRtgRag 111
                   q+ +R++R+g
  EPX70551.1 874 DLQAEDRAHRVG 885
                 **********87 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.4   0.0   1.3e-13     6e-10       3     169 ..     397     560 ..     395     562 .. 0.79
   2 ?   -3.0   0.1       1.4   6.3e+03      89     119 ..     658     668 ..     633     737 .. 0.54

  Alignments for each domain:
  == domain 1  score: 39.4 bits;  conditional E-value: 1.3e-13
                 EE-HHHHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG......GEEEESSS-B--... CS
      ResIII   3 elreyQeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkeekflflvprkslleqtleefkkflseayke..igkkvsgdkkka.ke 98 
                 +l++yQ+  i+ l   +  + +  g+++ + G GKT   +++ + l+ k+ +   l+++p  + +e +l+ef+kf ++ + e   g  v+ ++ ++  +
  EPX70551.1 397 SLQDYQIIGINWLYLLY--ELKLAGILADEMGLGKTCQTIAFFALLMDKNVNGPHLVIAPAST-MENWLREFAKFCPKLKIElyYGSQVEREEIRErIN 492
                 56677777776665444..56778999999*******************9999*******876.699**********9976677333343333333446 PP

                 .....-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS...TTTHHHHHT---SEEEEEESS- CS
      ResIII  99 kdstnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgak..kswreilekfkeavllglTATp 169
                 +++++ ++++tt+  +  ++     ++  l++++f+v i DE H l+    + +r+ l ++++ +++ lT+Tp
  EPX70551.1 493 SNKDSYNVMLTTYRLAATSK----ADRLFLRNQKFNVCIYDEGHYLKNRasERYRH-LMSIPADFRVLLTGTP 560
                 66889999999997666666....777778888999**********9985559999.677899*********9 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.4
                 ESSS-B--.......-SEEEEEHHHHHHTH. CS
      ResIII  89 vsgdkkkakekdstnkkilvttiqsldadse 119
                  +++                    s+++ ++
  EPX70551.1 658 ANKQ--------------------SVNNLLD 668
                 2222....................2222221 PP

>> ERCC3_RAD25_C  ERCC3/RAD25/XPB C-terminal helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.3   1.8e-08   8.1e-05      41     130 ..     769     864 ..     762     895 .. 0.79

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 1.8e-08
  ERCC3_RAD25_C  41 mnpnkfracefLikyhekrgDkiivfsD..nvf.aLkeyakklkkpyi..yGetseaerlkilqkfkknpkvntifls.kvgDtsiDlPeanvliq 130
                    m+++k+r ++ +++   ++gD+i++fs   +v   L+ + k+++ +++   G+t+   r++++++f +++++n+ +ls k g   i+l  an++i 
     EPX70551.1 769 MDATKVRKLKTILENAIAKGDRIVLFSQftQVLdILQLVMKSMNLKFLrfDGSTQVDFRQDLIDQFYADESINVFLLStKAGGFGINLACANMVIL 864
                    78899999999****************833233134555666666665337*************************987899**********9994 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (933 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       632  (0.0352502); expected 358.6 (0.02)
Passed bias filter:                      396  (0.0220871); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.70u 0.25s 00:00:00.95 Elapsed: 00:00:00.44
# Mc/sec: 6340.61
//
Query:       EPX70552.1  [L=387]
Description: hypothetical protein SOCG_04654 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.1e-29  102.7   9.8    2.5e-29  102.4   9.8    1.1  1  Atg14          Vacuolar sorting 38 and autophagy-related subu
     0.0052   17.0   4.6     0.0057   16.9   2.7    2.0  3  PHM7_cyt       Cytosolic domain of 10TM putative phosphate tr
     0.0076   16.3   3.1     0.0076   16.3   3.1    2.6  3  TolA_bind_tri  TolA binding protein trimerisation


Domain annotation for each model (and alignments):
>> Atg14  Vacuolar sorting 38 and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.4   9.8   4.1e-33   2.5e-29       1     303 [.       7     323 ..       7     364 .. 0.85

  Alignments for each domain:
  == domain 1  score: 102.4 bits;  conditional E-value: 4.1e-33
       Atg14   1 CplCerssrpfiCesClrngperlyelrerlak.lksekeslkkkiekalegkeeaeqledkiknkkakleelksliadlrerlqelkdklsqlkkeie 98 
                 C+lCe++  p+iCe+Cl+++  ++++ r +++k +  + e+++k+  k +  ++    + ++ + + +kl++l   ++d+ + l+ l++k++   + i+
  EPX70552.1   7 CQLCETR-PPSICEQCLCRDLTSFLTVRDQHQKeVIFRVEHIQKQQGKNILYRK----RFSEKEVLLDKLDRLCHIREDKLSALSALQQKIDDMEQNIK 100
                 *******.9**********76666666555544255556666666666666666....578888999999***9************************* PP

       Atg14  99 ekkkklaklsdklk...............kRrsdleslqneleerrkkqiaklqdaik...............rieqklsslssktles....rsslcs 163
                 e++++l+ ++++l                +  +d e lq +l e ++++i+k++++++               r+    ++ + +++++    + s++ 
  EPX70552.1 101 ERRETLELNNKSLNdcsirnrdiraesyiRSLRDSEILQLKLTELQQSLIRKVLEMYQlhwrrdvrlmsigegRKYFSENEGEVDSMDAslayQFSKLN 199
                 ***************************994445557***************************999999998844444555555555555566999999 PP

       Atg14 164 elaklyglrrtsyerg..kwvfskngeseesytIggiplpdlrdlnafpaeeIsasLsyiaqLlaLvshyLsirLPaeltlphscqpirplfiekslpk 260
                 ++++ +     ++++   + ++++  +++ s+tI+g+ +++  +++ f+++e ++ Ls+i+ +la   +yL+++LP++++lp+++q             
  EPX70552.1 200 MGVSGFASDYEENVQRrnQAFLEQAIQLNDSVTISGVDVCTKNKEKVFLNPESALPLSFICVFLA---QYLNVTLPCPIQLPSPDQ------------- 282
                 9999887776666665669**********************************************...******************............. PP

       Atg14 261 lspeteseflegvalLayniawLcrtqgvnsleleptqldtle 303
                   ++   ++++++++++yn+ wL+   g ++ ++++ ql+++e
  EPX70552.1 283 --KALPVYSNDQMLYIMYNVGWLASITGTFIIPKGMSQLQQME 323
                 ..99999*****************999***9777777555555 PP

>> PHM7_cyt  Cytosolic domain of 10TM putative phosphate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   2.7   9.5e-07    0.0057      29     140 ..      15     131 ..       7     162 .. 0.73
   2 ?   -2.3   0.0      0.75   4.5e+03      20      45 ..     174     199 ..     172     224 .. 0.80
   3 ?   -3.1   0.0       1.3   7.9e+03     108     139 ..     337     368 ..     332     381 .. 0.65

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 9.5e-07
    PHM7_cyt  29 gkvvesvqivrdvkkldklveerek.avrkleaalskykkngkklpkkr......pthklgflglkligkkvdaidyyrekleeldeeieeerekv..k 118
                  +  ++ +++rd++ +  + ++++k ++ + e++++++ kn   l +kr         kl  l +++ + k  a+  +++k+++++++i+e re+   +
  EPX70552.1  15 PSI-CEQCLCRDLTSFLTVRDQHQKeVIFRVEHIQKQQGKNI--LYRKRfsekevLLDKLDRL-CHIREDKLSALSALQQKIDDMEQNIKERRETLelN 109
                 554.5569*********9999987626788888876555554..4455677777755666655.67889*************************97556 PP

    PHM7_cyt 119 kkplgaaFvtfesersaaavak 140
                 +k l+ + +  +++r+  ++ +
  EPX70552.1 110 NKSLNDCSIRNRDIRAESYIRS 131
                 6788888888888887777754 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.75
    PHM7_cyt  20 keffeelypgkvvesvqivrdvkkld 45 
                 +++f+e+  +    + +++++++kl+
  EPX70552.1 174 RKYFSENEGEVDSMDASLAYQFSKLN 199
                 57888887777777888888888875 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 1.3
    PHM7_cyt 108 eeieeerekvkkkplgaaFvtfesersaaava 139
                  ++ e+++ v   +l++ Fvtf   + a++ +
  EPX70552.1 337 SKCIEAKNYVCCPQLQMDFVTFYRLSCAHNPY 368
                 55555555566667888899998877777654 PP

>> TolA_bind_tri  TolA binding protein trimerisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   3.1   1.3e-06    0.0076       4      60 ..      69     125 ..      64     136 .. 0.83
   2 ?   -2.4   0.3      0.89   5.3e+03      10      29 ..     210     229 ..     209     230 .. 0.75
   3 ?   -4.5   0.9         3   1.8e+04      23      30 ..     318     325 ..     315     326 .. 0.51

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 1.3e-06
  TolA_bind_tri   4 drvarLErilearsqlllelqqqlealqqelreLRGqiEelqyqleqleerQrdlYl 60 
                    d+++rL +i e + ++l  lqq++++++q ++e R  +E ++  l++   r rd+  
     EPX70552.1  69 DKLDRLCHIREDKLSALSALQQKIDDMEQNIKERRETLELNNKSLNDCSIRNRDIRA 125
                    344555555555559**************************************9865 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.89
  TolA_bind_tri  10 Erilearsqlllelqqqlea 29 
                    E+ ++ r+q+ le+  ql++
     EPX70552.1 210 EENVQRRNQAFLEQAIQLND 229
                    56677888888888888875 PP

  == domain 3  score: -4.5 bits;  conditional E-value: 3
  TolA_bind_tri  23 lqqqleal 30 
                    ++qq+e l
     EPX70552.1 318 QLQQMELL 325
                    44555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (387 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1309  (0.0730102); expected 358.6 (0.02)
Passed bias filter:                      528  (0.0294495); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.45
# Mc/sec: 2610.97
//
Query:       EPX70553.1  [L=265]
Description: F-actin capping protein beta subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.2e-94  314.3   0.0      6e-94  314.1   0.0    1.0  1  F_actin_cap_B  F-actin capping protein, beta subunit
  ------ inclusion threshold ------
      0.038   13.4   0.1        2.3    7.6   0.0    2.5  2  F-actin_cap_A  F-actin capping protein alpha subunit


Domain annotation for each model (and alignments):
>> F_actin_cap_B  F-actin capping protein, beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  314.1   0.0   6.7e-98     6e-94       2     238 .]       5     238 ..       4     238 .. 0.97

  Alignments for each domain:
  == domain 1  score: 314.1 bits;  conditional E-value: 6.7e-98
  F_actin_cap_B   2 daaldllrrlppkkveknlenlielvpdlaedllssvdqplkvakdkeegkeyllcdyNrdgdsYRSpwsnkYdpeledglvpseklrklEieane 97 
                    daaldllrrl+pk+++knl+++++++pdla+ llssvdqpl+v +++e+g++yllcd+NrdgdsYRSpw+nkYdp+ledglv+s+++rklE+++ne
     EPX70553.1   5 DAALDLLRRLNPKDISKNLDAILAVAPDLADVLLSSVDQPLQVSNCSESGNQYLLCDFNRDGDSYRSPWTNKYDPPLEDGLVSSDRVRKLESALNE 100
                    789********************************************************************************************* PP

  F_actin_cap_B  98 afdeYrelYYeggvssvYlwdlddegfagvvllkkeakeskeekkgswdsihvvevkeeesskkkaeYkltstvilslkkkkkka...gelslsgs 190
                    a+ +Y +lYYeggvssvYlwd+dd ++ag+vl+kk+++    + +  wdsihv+e+ +++ +++ + Y+ltst+il l ++++++   g+lslsg+
     EPX70553.1 101 AMRVYLDLYYEGGVSSVYLWDQDD-SYAGAVLIKKASS----SGSCGWDSIHVFECLPTS-ETDVFDYRLTSTIILYLGSDQQSSlvsGALSLSGH 190
                    ***********************9.***********96....56799***********96.556**************999977677799****** PP

  F_actin_cap_B 191 ltrqlekelkledesshianiGklvedmenklrnllqevYfgktkdiv 238
                    ltrq++++++++d++  ++niG+lve+me+++rn lqevYf+kt+di+
     EPX70553.1 191 LTRQTSQRMPASDQDGEVSNIGRLVEEMETRMRNFLQEVYFDKTRDII 238
                    **********************************************96 PP

>> F-actin_cap_A  F-actin capping protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.0   0.00025       2.3      99     136 ..      89     126 ..      17     159 .. 0.80
   2 ?    3.4   0.0    0.0049        44     191     240 ..     192     241 ..     183     254 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.00025
                    GGGHHHHHHHHHHHHHHHHHH-TT-EEEEEEEEETTEE CS
  F-actin_cap_A  99 seleelrkalekalekYvkehYpsgvasvypkeeeeek 136
                    + + +l +al++a++ Y++ +Y+ gv+svy  +++++ 
     EPX70553.1  89 DRVRKLESALNEAMRVYLDLYYEGGVSSVYLWDQDDSY 126
                    5678999***********************74443333 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.0049
                    EEEEEEEEE--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTT CS
  F-actin_cap_A 191 skevseslsvsseessakeivklikeaenkyqeeLnesyeeLsekafkaL 240
                    ++++s+ +++s+++ + ++i +l++e+e+ + + L+e y +     + + 
     EPX70553.1 192 TRQTSQRMPASDQDGEVSNIGRLVEEMETRMRNFLQEVYFDKTRDIINQT 241
                    45667778888999999999999999999999999998866555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (265 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       601  (0.0335211); expected 358.6 (0.02)
Passed bias filter:                      549  (0.0306208); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.95
# Mc/sec: 842.80
//
Query:       EPX70554.1  [L=732]
Description: bromodomain protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.9e-45  151.0   2.1    5.5e-23   80.8   0.3    2.8  3  Bromodomain  Bromodomain
    2.9e-16   59.4   0.0    7.9e-16   58.0   0.0    1.8  1  BET          Bromodomain extra-terminal - transcription regul


Domain annotation for each model (and alignments):
>> Bromodomain  Bromodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.0   0.0   3.1e-23   2.8e-19       3      79 ..     248     326 ..     246     331 .. 0.93
   2 !   80.8   0.3   6.1e-27   5.5e-23       1      80 [.     402     486 ..     402     490 .. 0.92
   3 ?   -2.8   0.1      0.79   7.1e+03      13      30 ..     506     521 ..     491     537 .. 0.61

  Alignments for each domain:
  == domain 1  score: 69.0 bits;  conditional E-value: 3.1e-23
                  HHHHHBHTTTCGGGGCSTT..-GCCSTTHHHH.SS---HHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHSHTTSHHH CS
  Bromodomain   3 kilsellehklaepFlepv..dpeefpdyyavikkPldLstIkkklesnkYksladfeadlkllfsNarkyngegsviy 79 
                  ++l++l +  ++ pF+ pv   + + pdy++++k+P+dL  I+kk  s++Y s + f +d++l+f+N+  yng +s++ 
   EPX70554.1 248 AMLRQLRRGRDSIPFRAPVdpVKQNIPDYPTIVKHPMDLGSIQKKFSSGQYASAENFIDDMNLMFDNCFLYNGTESPVG 326
                  5788999999*********99999*************************************************999985 PP

  == domain 2  score: 80.8 bits;  conditional E-value: 6.1e-27
                  HHHHHHHBHTTT...CGGGGCSTT..-GCCSTTHHHH.SS---HHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHSHTTSHHHH CS
  Bromodomain   1 lekilsellehk...laepFlepv..dpeefpdyyavikkPldLstIkkklesnkYksladfeadlkllfsNarkyngegsviye 80 
                  ++ +l+ell+++    a+pF +pv      +pdyy+vik+P+dL t+++kl++n+Y sl++fead+ l+f+N++k+n+ g++++ 
   EPX70554.1 402 CQSVLKELLKKQhesYAYPFYKPVnpIACGCPDYYKVIKHPMDLCTMQNKLNHNEYASLKAFEADMLLMFKNCYKFNPAGTPVHI 486
                  788899999888888999******777789***************************************************9975 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 0.79
                  CGGGGCSTT-GCCSTTHH CS
  Bromodomain  13 laepFlepvdpeefpdyy 30 
                  ++e+F++    +++pdyy
   EPX70554.1 506 DSETFSSL--SSVNPDYY 521
                  55556543..56666665 PP

>> BET  Bromodomain extra-terminal - transcription regulation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.0   0.0   8.8e-20   7.9e-16       1      64 []     584     646 ..     584     646 .. 0.97

  Alignments for each domain:
  == domain 1  score: 58.0 bits;  conditional E-value: 8.8e-20
         BET   1 pmtyeeKkeLseeInkLpgeklgrvveIIqerepelqsdedEiElDidaldddtLreLekyvkk 64 
                 p+tye++ eL+e++n L++++l++v eI+++  p+l    dEiE+D+ ++++d++++ ++yv+k
  EPX70554.1 584 PITYEMQNELAEQCNYLTADQLTHVAEILRSALPHL-RKTDEIEIDVSSMPPDVFFKVYYYVCK 646
                 79*********************************9.688**********************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (732 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       801  (0.0446762); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.27s 00:00:00.92 Elapsed: 00:00:00.47
# Mc/sec: 4709.98
//
Query:       EPX70555.1  [L=676]
Description: U3 snoRNP-associated protein Utp5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.5e-21   75.2   0.1    4.5e-21   75.2   0.1    2.2  3  Utp12        Dip2/Utp12 Family
  ------ inclusion threshold ------
      0.033   14.3   3.7        2.7    8.1   0.0    2.8  3  Aegerolysin  Aegerolysin
       0.13   12.5   0.0         73    3.8   0.0    3.8  3  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain


Domain annotation for each model (and alignments):
>> Utp12  Dip2/Utp12 Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1      0.67     4e+03      57      79 ..     178     201 ..     177     211 .. 0.74
   2 ?   -3.2   0.0       1.8   1.1e+04      79      94 ..     433     448 ..     411     460 .. 0.64
   3 !   75.2   0.1   7.6e-25   4.5e-21       1     106 [.     476     579 ..     476     580 .. 0.98

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.67
                 HHHHHHHHHHHHSH..HHHHHHHH CS
       Utp12  57 allrvHgsylvasps.dlvpaLrs 79 
                 a++++H+ +l a p+ + v++L++
  EPX70555.1 178 AIVTSHSVHLLALPDsNPVDTLTT 201
                 68999*****99998666667765 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.8
                 HHHHHHHHHHHHHHHH CS
       Utp12  79 slqkslrerlktlskl 94 
                 +   sl+erl+tl+kl
  EPX70555.1 433 EQEPSLAERLQTLTKL 448
                 4444555666666554 PP

  == domain 3  score: 75.2 bits;  conditional E-value: 7.6e-25
                 HHHHHHH.HHHSS-TTTHHHHHHCS-CTCHHHHHHHHHHHH.HTTTTHHHHHHHHHHHHHHHHHHHHHSH.HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       Utp12   1 ndeelleevlekippsdirltvlrLpssyvlkLLeflaerlaeksphlelllrwlkallrvHgsylvaspsdlvpaLrslqkslrerlktlskllglnl 99 
                 nd++lle+++++   + i++tv+rL++ +++ LL  +a+rla+++ ++ + l w+++ l  Hg++l+ +++ l+++L++l+++l++r ++++++l+l+ 
  EPX70555.1 476 NDQFLLESCFNNQSLEIIENTVRRLDPALAPALLDKVADRLARRPLRADTFLTWIRCALIFHGGHLSLIRD-LKDQLATLRSVLETRGSKYTSMLALQ- 572
                 89********************************************************************6.**************************. PP

                 HHHHHHH CS
       Utp12 100 grLdyll 106
                 grLd++ 
  EPX70555.1 573 GRLDMVF 579
                 *****86 PP

>> Aegerolysin  Aegerolysin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       1.3   7.9e+03      75      89 ..      58      72 ..      46      74 .. 0.71
   2 ?    8.1   0.0   0.00045       2.7      34      94 ..     244     302 ..     230     307 .. 0.81
   3 ?    6.0   0.6     0.002        12      15      46 ..     636     667 ..     630     676 .] 0.85

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.3
                 EECTT-EEEEEEEEE CS
  Aegerolysin 75 lvdgekkictlyWdc 89
                  ++++k + ++ Wd+
   EPX70555.1 58 ALEENKHVSSICWDQ 72
                 348899999999996 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.00045
                  EEEEEE-GGGTTT-EE-TT-EEEEEEE--TT-S--EEEEEEEE...CTT-EEEEEEEEE-TTSS CS
  Aegerolysin  34 dkdkeitaedveelvikpggsrevascGrenaasGteGtldlv...dgekkictlyWdcPwgsk 94 
                  +k + + ++++    + +++ +e+ +c++++ +s  +G++      dg+ +i    +d+Pw+sk
   EPX70555.1 244 EKLEDVPSKNIG-ALVCENDVQELTVCEKTEESSEKKGSILAAlsvDGTIEI----FDNPWESK 302
                  555566666666.456679999*****************9876678999999....*****996 PP

  == domain 3  score: 6.0 bits;  conditional E-value: 0.002
                  S-EEEEEEEEEESEEEETTEEEEEE-GGGTTT CS
  Aegerolysin  15 edlkirnaklesGkfykendkdkeitaedvee 46 
                  e++++++  +++G+ ++++d d+e+++edv++
   EPX70555.1 636 ENFSENEGDIANGEVHSDEDYDQELHEEDVQH 667
                  578888999*********************95 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.012        73      58      91 ..      39      72 ..      15      73 .. 0.88
   2 ?    2.4   0.0     0.032   1.9e+02      49      87 ..      88     126 ..      84     130 .. 0.88
   3 ?    0.8   0.0      0.11   6.3e+02      48      66 ..     278     296 ..     272     305 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.012
  ANAPC4_WD40 58 sdgevrlldaesgkvvhslsvksekavtclgWge 91
                 +  ++r++d+++g +  ++  +++k+v+++ W +
   EPX70555.1 39 DSQRLRIFDSQEGSLKTEYALEENKHVSSICWDQ 72
                 56689***************************75 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.032
  ANAPC4_WD40  49 dgklLavaysdgevrlldaesgkvvhslsvksekavtcl 87 
                  +g++   ++++ge+ +++   g+v +s++ ++  ++t++
   EPX70555.1  88 SGHVVLLGTEEGEILVYSDALGTVTKSYHFGQLGKITKV 126
                  699999*************99*99999999998888776 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.11
  ANAPC4_WD40  48 pdgklLavaysdgevrlld 66 
                  ++g++La    dg+++++d
   EPX70555.1 278 KKGSILAALSVDGTIEIFD 296
                  689**************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (676 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1395  (0.0778069); expected 358.6 (0.02)
Passed bias filter:                      671  (0.0374254); expected 358.6 (0.02)
Passed Vit filter:                        78  (0.00435049); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.80u 0.35s 00:00:01.14 Elapsed: 00:00:00.52
# Mc/sec: 3931.48
//
Query:       EPX70556.1  [L=250]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      6e-22   78.3   8.0    6.3e-21   75.0   8.0    2.2  1  DUF2407_C  DUF2407 C-terminal domain
    8.2e-19   68.1   0.1      2e-18   66.9   0.1    1.7  1  DUF2407    DUF2407 ubiquitin-like domain
  ------ inclusion threshold ------
      0.061   13.1   0.0       0.13   12.0   0.0    1.5  1  ubiquitin  Ubiquitin family


Domain annotation for each model (and alignments):
>> DUF2407_C  DUF2407 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.0   8.0   1.1e-24   6.3e-21       1     139 [.     135     245 ..     135     246 .. 0.84

  Alignments for each domain:
  == domain 1  score: 75.0 bits;  conditional E-value: 1.1e-24
   DUF2407_C   1 iGFDRLlsaGfseeeieaLRsqFrsiygseetpdtmpsdleeeeeeelreLEerWidstanaeeaaeaeeegeaakeeensvdseeskanedlliGlli 99 
                 +GFDRL++aGf+e ei++LRsqF++ +g  +  d+ p+d       ++re E+ Wid++a++++              ++    e     e ll G++i
  EPX70556.1 135 RGFDRLREAGFTETEISSLRSQFHQARG--TNLDSLPED-------SVREAEDDWIDNGAQTSS--------------AD----EFDMSYETLLAGVMI 206
                 7*************************99..445556655.......9*************3211..............11....12234689******* PP

   DUF2407_C 100 GfflglfalllllkeegllnkrqkmaviaGvlvnlvlglv 139
                 Gff g +a+ +l+++  +++ r+++++++G+++n++ g++
  EPX70556.1 207 GFFGGAVACYFLWQRT-MFSLRMQLSILVGIICNFAYGVL 245
                 ********88888776.******************99986 PP

>> DUF2407  DUF2407 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.9   0.1   3.4e-22     2e-18       2     103 ..      10      98 ..       9      99 .. 0.87

  Alignments for each domain:
  == domain 1  score: 66.9 bits;  conditional E-value: 3.4e-22
     DUF2407   2 llviRFsasipDleLdipdpntttvagLkqliRerlpaelasrrLrLIyaGrlLedttslasslklpeesvsdkaekskekgkapvreqeeeriYihCs 100
                  +++RF+++ipDl+Ldi++  +tt+ ++ ++iR+r+ +++++++L+LI++GrlL+   +++++++ + +          +k+++++     ++++ihC+
  EPX70556.1  10 KIIVRFASAIPDLTLDISNAGETTIREVFKTIRSRV-PDCKDKQLKLIFQGRLLSPLFTIERAVRGNWH-------YDPRKEDDES-----RKAFIHCI 95 
                 689*********************************.9****************************922.......2223333333.....589***** PP

     DUF2407 101 iGd 103
                 +G+
  EPX70556.1  96 VGP 98 
                 **7 PP

>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   2.2e-05      0.13      12      49 ..      25      63 ..      11      69 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.2e-05
                EEEEETTSBHHHHHHHHHHHH.TSSGGGEEEEETTEEE- CS
   ubiquitin 12 tleveesdtveelKekiaeke.gipaeqqrLiysGkvLe 49
                +++ + ++t++e+ + i ++  +   +q++Li++G++L+
  EPX70556.1 25 DISNAGETTIREVFKTIRSRVpDCKDKQLKLIFQGRLLS 63
                55556789999*9999*999955666677********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       652  (0.0363657); expected 358.6 (0.02)
Passed bias filter:                      552  (0.0307881); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.29s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 1731.18
//
Query:       EPX70557.1  [L=1057]
Description: AAA family ATPase ELf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.5e-58  195.3   1.1    8.5e-34  117.0   0.0    3.7  2  ABC_tran         ABC transporter
      1e-17   64.9   0.7    5.4e-07   29.7   0.5    4.0  3  AAA_21           AAA domain, putative AbiEii toxin, Type IV T
    8.9e-14   51.4   0.0    0.00075   19.0   0.0    3.6  3  SMC_N            RecF/RecN/SMC N terminal domain
      6e-11   42.1   0.1    1.3e-10   41.0   0.1    1.6  1  Chromo           Chromo (CHRromatin Organisation MOdifier) do
    8.9e-10   39.4   0.1     0.0019   18.7   0.0    3.3  3  AAA_23           AAA domain
    2.7e-07   30.2   0.1      0.014   15.1   0.1    2.6  2  AAA_29           P-loop containing region of AAA domain
    7.4e-07   29.2   0.5      0.039   14.0   0.0    3.3  3  MMR_HSR1         50S ribosome-binding GTPase
    4.8e-06   26.6   0.1      0.027   14.4   0.0    3.0  3  RsgA_GTPase      RsgA GTPase
    1.1e-05   25.9   0.2       0.22   11.9   0.0    3.5  3  AAA_16           AAA ATPase domain
    2.8e-05   24.0   0.5       0.12   12.0   0.0    3.4  3  AAA_15           AAA ATPase domain
      4e-05   23.9   0.0       0.46   10.7   0.0    3.0  2  AAA_28           AAA domain
    0.00012   22.3   0.7      0.017   15.2   0.0    3.4  3  DUF87            Helicase HerA, central domain
    0.00017   21.5   0.0       0.25   11.3   0.0    2.9  2  NACHT            NACHT domain
    0.00037   19.6   0.0       0.65    8.9   0.0    2.5  2  MeaB             Methylmalonyl Co-A mutase-associated GTPase 
    0.00042   20.7   0.0        1.8    9.0   0.0    3.0  2  RNA_helicase     RNA helicase
     0.0007   20.0   0.1        1.3    9.4   0.1    3.2  2  AAA              ATPase family associated with various cellul
    0.00084   19.0   0.5      0.024   14.2   0.0    2.8  3  CLASP_N          CLASP N terminal
      0.001   19.3   0.0          1    9.6   0.0    3.1  2  AAA_22           AAA domain
     0.0023   18.5   0.0        2.3    8.8   0.0    2.8  2  AAA_18           AAA domain
     0.0023   18.0   0.3        2.2    8.3   0.0    3.2  2  Dynamin_N        Dynamin family
     0.0025   17.5   2.3        1.5    8.5   0.0    3.9  4  AAA_30           AAA domain
     0.0031   17.7   0.0        5.3    7.2   0.0    3.1  2  AAA_33           AAA domain
     0.0038   17.6   6.5       0.11   12.9   0.0    4.4  4  HEAT_2           HEAT repeats
     0.0043   16.7   0.0        2.5    7.6   0.0    2.5  2  AAA_27           AAA domain
     0.0046   16.2   0.0       0.39    9.9   0.0    2.5  2  NB-ARC           NB-ARC domain
     0.0056   16.7   0.0        4.7    7.3   0.0    2.8  2  AAA_14           AAA domain
     0.0071   15.5   0.0        1.3    8.1   0.0    2.5  2  DUF815           Protein of unknown function (DUF815)
     0.0091   15.9   1.1        3.7    7.4   0.0    3.0  2  ATPase_2         ATPase domain predominantly from Archaea
  ------ inclusion threshold ------
      0.013   15.4   0.0        2.9    7.8   0.0    2.5  2  Rad17            Rad17 P-loop domain
       0.02   15.1   5.4       0.94    9.9   0.1    4.7  3  HEAT             HEAT repeat
      0.026   14.3   0.0        4.6    6.9   0.0    2.8  2  Viral_helicase1  Viral (Superfamily 1) RNA helicase
      0.027   14.7   0.1        7.6    6.8   0.0    2.9  2  Roc              Ras of Complex, Roc, domain of DAPkinase
      0.037   13.7   0.1        2.4    7.8   0.0    2.5  2  AAA_24           AAA domain
      0.045   13.7   0.0        3.2    7.6   0.0    2.7  2  MobB             Molybdopterin guanine dinucleotide synthesis
      0.056   13.4   0.1         10    6.0   0.0    3.0  3  NTPase_1         NTPase
       0.06   13.0   0.0       0.45   10.1   0.0    2.1  2  ATP-synt_ab      ATP synthase alpha/beta family, nucleotide-b
      0.062   13.1   0.0        8.4    6.1   0.0    2.5  2  ATP_bind_1       Conserved hypothetical ATP binding protein
        0.1   12.4   0.1         24    4.6   0.0    3.4  3  IstB_IS21        IstB-like ATP binding protein
        0.1   12.1   0.0        6.5    6.2   0.0    2.5  2  AAA_7            P-loop containing dynein motor region
       0.12   12.1   0.0         25    4.6   0.0    2.7  2  PduV-EutP        Ethanolamine utilisation - propanediol utili
       0.13   11.9   0.0         15    5.1   0.0    2.7  2  cobW             CobW/HypB/UreG, nucleotide-binding domain


Domain annotation for each model (and alignments):
>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.7   0.1   4.6e-23     2e-20       1     137 []     460     591 ..     460     591 .. 0.72
   2 !  117.0   0.0     2e-36   8.5e-34       1     137 []     709     939 ..     709     939 .. 0.96

  Alignments for each domain:
  == domain 1  score: 73.7 bits;  conditional E-value: 4.6e-23
                 EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--...SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHHHHHTCHHHHHHHSTTGG CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   1 lknvslklkegekvaivGenGaGKStLlkllagllkp...teGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvrenesdeeiekalsklglke 96 
                 l++ +l l++g+++++vG+nG+GKStLlk++a        + +++   ++ +  ++l+  + +  ++      +p l +  n  +ee+++al+++g +e
  EPX70557.1 460 LNHTNLRLYRGHRYGVVGHNGCGKSTLLKAIADYKVEnfpAPEQV---KTCFVAHSLQGEDTS-ICILDFVANDPAL-ANMNVTREEAAAALKSVGFTE 553
                 67899**************************98654433366666...222333222223222.2333334555555.555677777888888888766 PP

                 TTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  97 lkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137
                    + +k+  +sLSgG+k +++lara+l+k+++lllDEpt+
  EPX70557.1 554 ---DMQKDAVASLSGGWKMKLELARAMLQKADILLLDEPTN 591
                 ...4444557******************************8 PP

  == domain 2  score: 117.0 bits;  conditional E-value: 2e-36
                 EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEE.....................EETTCEGGG........B-HHHCCHCEEEE-SS..- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....................xxxxxxxxx........xxxxxxxxxxxxxxxx..x RF
    ABC_tran   1 lknvslklkegekvaivGenGaGKStLlkllagllkpteGei.....................lldgkdlke........qeleslrkeigvlpqe..p 68 
                 l++v+  l+ +++vai+G+nGaGKStL+k+l+g++ p+eG++                     +l+++++++        q++e+l+ke + l+ e  +
  EPX70557.1 709 LDDVTCGLSLSSRVAILGPNGAGKSTLIKVLIGEVIPQEGRVfkhpnlrvgyvaqhafhhldqHLEKTPSQYiqwrysggQDREVLEKETRKLTDEdrA 807
                 799***********************************************************9999999999**********************99999 PP

                 -S-TTSBHHHH......................................................HHHTC........HHHHHHHSTTGGTTCBGESTT CS
                 xxxxxxxxxxx......................................................xxxxx........xxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  69 qlfpeltvren......................................................esdee........iekalsklglkelkdtvvkss 105
                 ql++e+tv  +                                                      es++e        +e+++++++ ++l+ +++++s
  EPX70557.1 808 QLQREITVDGErrrvealigrqkykksfqyeikwlgkphkynswiprdlllengfqkfvqafddrESSREglgfreliPEDIRKHFEEIGLPGDIADYS 906
                 *******98878*******************************************999998887655555999999*9********************* PP

                 S.GGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 x.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 106 p.ssLSgGqkqrvalarallkkpkllllDEpta 137
                 p ssLSgGqk++v++a++l+++p+ll+lDEpt+
  EPX70557.1 907 PlSSLSGGQKVKVVIAACLWNNPQLLVLDEPTN 939
                 ********************************8 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.0   7.7e-05     0.034       3      20 ..     474     491 ..     473     506 .. 0.86
   2 !   15.9   0.0     2e-05    0.0086     254     303 .]     577     624 ..     556     624 .. 0.87
   3 !   29.7   0.5   1.2e-09   5.4e-07       3     302 ..     723     970 ..     722     971 .. 0.58

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 7.7e-05
      AAA_21   3 vliGpNgsGKSnLLdald 20 
                 +++G Ng+GKS+LL+a+ 
  EPX70557.1 474 GVVGHNGCGKSTLLKAIA 491
                 589**************6 PP

  == domain 2  score: 15.9 bits;  conditional E-value: 2e-05
      AAA_21 254 alkkgsllliDEpEngLHPkllrrllellkelsrngaQviltTHSpllld 303
                  l+k+++ll+DEp n+L+   ++ l   l + ++  + +++++H+ ++ld
  EPX70557.1 577 MLQKADILLLDEPTNHLDVTNIAWLEAYLTAQTQ--ITCLMVSHDSSFLD 624
                 46778**************888888877788888..*********99886 PP

  == domain 3  score: 29.7 bits;  conditional E-value: 1.2e-09
      AAA_21   3 vliGpNgsGKSnLLdaldllarldrdvegltdelsggggirkipslldlydpeipfefeieeflsqgvryryglrlersqveeklssvetllesgllld 101
                 ++ GpNg+GKS+L++ l         +e    e + ++++    ++    ++   +++    ++sq + +ry+  ++r+ +                  
  EPX70557.1 723 AILGPNGAGKSTLIKVL--------IGEVIPQEGRVFKHPNLRVGYVAQHAFHHLDQHLEK-TPSQYIQWRYSGGQDREVL-----------------E 795
                 799**************........334444455555555555555555555555555555.9999999999999999999.................4 PP

      AAA_21 102 krsleeedvfnpeargirggvsvfslkelsvsepndlqfgkaltditsrawsllllldglrkerigllnifadyfgfakekrllqrlvrslklveiels 200
                 k+ ++ +d++ ++ +++  +  ++++ e ++  +  +++++  ++     ++++++       + +l n f++++   + ++  ++ ++ + l+   ++
  EPX70557.1 796 KETRKLTDEDRAQLQREITVDGERRRVEALIGRQKYKKSFQYEIKWLGKPHKYNSWIPR----DLLLENGFQKFVQAFDDRESSREGLGFRELIPEDIR 890
                 44444444444444444444444444444444444444444444444444444444433....334444443333333333333333333333333333 PP

      AAA_21 201 dlgegeeliasvderlrergvvflengdgqelparelSdGtkrllalltallralkkgsllliDEpEngLHPkllrrllellkelsrngaQviltTHSp 299
                 +  e + l+ ++++ +                p+++lS G+k    +++a+l  ++   ll++DEp n+L+  +l  l++ +   +++g+ v++ +H+ 
  EPX70557.1 891 KHFEEIGLPGDIADYS----------------PLSSLSGGQKVK-VVIAACLWNNP--QLLVLDEPTNFLDRDALGGLATAI---RDWGGGVVMISHNA 967
                 3333333334444433................67888*******.77777777776..9*************8888888888...7799********98 PP

      AAA_21 300 lll 302
                 +++
  EPX70557.1 968 EFV 970
                 876 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.0   0.00031      0.14      28      44 ..     474     490 ..     460     493 .. 0.87
   2 !   16.0   0.1   1.4e-05    0.0063     113     204 ..     532     625 ..     507     638 .. 0.88
   3 !   19.0   0.0   1.7e-06   0.00075      23     203 ..     719     971 ..     705     984 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00031
                 EEEESTTSSHHHHHHHH CS
                 xxxxxxxxxxxxxxxxx RF
       SMC_N  28 aivGpNGSGKsnlldAi 44 
                  +vG+NG+GKs ll Ai
  EPX70557.1 474 GVVGHNGCGKSTLLKAI 490
                 69**************9 PP

  == domain 2  score: 16.0 bits;  conditional E-value: 1.4e-05
                 ETTEEE-HHHHHHHHHCTT-STT.......CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC CS
                 xxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 113 ingkevtkkevsellesagiske.......lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemlek 204
                 + + +vt++e +  l+s+g++++       +LSgG k    + L +A  + ++a + llDe   +LD +n++ +  +l +++ +   +++s+++ +l +
  EPX70557.1 532 LANMNVTREEAAAALKSVGFTEDmqkdavaSLSGGWK----MKLELARAMLQKADILLLDEPTNHLDVTNIAWLEAYLTAQT-QITCLMVSHDSSFLDH 625
                 67889999999*********99999999999****87....78899999******************************999.7788889998887765 PP

  == domain 3  score: 19.0 bits;  conditional E-value: 1.7e-06
                 TSSEEEEEESTTSSHHHHHHHHHHHCTT.TTTTTTCHCCC..CCC--.....BTTCSSTTEEEEEEEEEETTEESSSSSSCEEEEEEEETTSEEEEEET CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  23 sksftaivGpNGSGKsnlldAilFvLGersakklrsekls..dlihk.....skekasvkkaeveitfdnedkklkiekeevsisrrvkrkgeseykin 114
                 s s  ai+GpNG+GKs l+  +      ++ + +++ +l+   + ++      ++ +++ + +++  ++  +++++ eke  +++ +   + + e++++
  EPX70557.1 719 S-SRVAILGPNGAGKSTLIKVLIGEVIPQEGRVFKHPNLRvgYVAQHafhhlDQHLEKTPSQYIQWRYSGGQDREVLEKETRKLTDEDRAQLQREITVD 816
                 4.4579*************99844333356666655544311222224445667777888899999999999999999999999999999999999999 PP

                 TEEE-HHHHHHHHHCTT-STT...........................................................................CS- CS
                 xxxxxxxxxxxxxxxxxxxxx...........................................................................xxx RF
       SMC_N 115 gkevtkkevsellesagiske...........................................................................lLS 138
                 g++ +    + l+ +++ +k+                                                                           +LS
  EPX70557.1 817 GERRRV---EALIGRQKYKKSfqyeikwlgkphkynswiprdlllengfqkfvqafddressreglgfrelipedirkhfeeiglpgdiadysplsSLS 912
                 987665...555555555555666699************************************************************************ PP

                 HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 139 gGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemle 203
                 gG+k  v    ++A    +   l +lDe    LD      +a+ ++       +++is+++e+++
  EPX70557.1 913 GGQKVKV----VIAACLWNNPQLLVLDEPTNFLDRDALGGLATAIRDWG--GGVVMISHNAEFVS 971
                 ***9655....4454556666799*********************9988..77888888888775 PP

>> Chromo  Chromo (CHRromatin Organisation MOdifier) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.0   0.1   2.9e-13   1.3e-10       2      54 .]     821     872 ..     820     872 .. 0.92

  Alignments for each domain:
  == domain 1  score: 41.0 bits;  conditional E-value: 2.9e-13
                 EEEEEEEEEEETTEECEEEEEEETTSTGGGTEEEEGG.GCSSHSHHHHHHHHHH CS
      Chromo   2 eVerIidhrtdkdgleleYlVKWkglpysentWEpee.nlekcfqelideFkkr 54 
                  Ve +i++++ k+    +Y +KW g p+++n+W p++ +le+ fq+++++F++r
  EPX70557.1 821 RVEALIGRQKYKKSF--QYEIKWLGKPHKYNSWIPRDlLLENGFQKFVQAFDDR 872
                 59*************..********************555556********997 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   5.6e-05     0.025      24      40 ..     475     491 ..     465     506 .. 0.94
   2 !   18.7   0.0   4.4e-06    0.0019      22     130 ..     722     831 ..     707     895 .. 0.72
   3 ?    1.0   0.1       1.2   5.2e+02     156     176 ..    1003    1023 ..     939    1037 .. 0.63

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 5.6e-05
      AAA_23  24 ItGpNGaGKTTildAik 40 
                 ++G+NG+GK+T+l Ai 
  EPX70557.1 475 VVGHNGCGKSTLLKAIA 491
                 69*************96 PP

  == domain 2  score: 18.7 bits;  conditional E-value: 4.4e-06
      AAA_23  22 tlItGpNGaGKTTildAiklaLygetprlsrks...........grgfeksdveiesegkvkayveltfenkdgrytrsiererelskkkgkttkkakl 109
                 ++I GpNGaGK+T++  +    ++  p+++r             +  f + d ++e  ++ ++y++ +++  ++r   ++    ++++k +++ + +  
  EPX70557.1 722 VAILGPNGAGKSTLIKVL---IGEVIPQEGRVFkhpnlrvgyvaQHAFHHLDQHLE--KTPSQYIQWRYSGGQDR---EV--LEKETRKLTDEDRAQLQ 810
                 48************8654...45555666555544566654443333333333333..56777899999887774...23..34444455555556666 PP

      AAA_23 110 elleideleqfisellgskki 130
                 +++++d  +++++ l+g++k 
  EPX70557.1 811 REITVDGERRRVEALIGRQKY 831
                 778888888999998887754 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 1.2
      AAA_23  156 eelekeleeledekkllekle 176 
                  e+  k++e ++++kk+l ++e
  EPX70557.1 1003 EKDLKKIESKTTKKKKLTRNE 1023
                  111222333333333333322 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.0   0.00027      0.12      25      43 ..     473     491 ..     460     493 .. 0.81
   2 !   15.1   0.1   3.2e-05     0.014      14      39 ..     711     736 ..     707     748 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00027
      AAA_29  25 tlltGpsGsGKSTllDAiq 43 
                 + ++G++G GKSTll Ai+
  EPX70557.1 473 YGVVGHNGCGKSTLLKAIA 491
                 5689***********9985 PP

  == domain 2  score: 15.1 bits;  conditional E-value: 3.2e-05
      AAA_29  14 ghtieidlkgatlltGpsGsGKSTll 39 
                 + t  ++l++ + + Gp+G+GKSTl+
  EPX70557.1 711 DVTCGLSLSSRVAILGPNGAGKSTLI 736
                 5566677777899************9 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.0   0.00059      0.26       2      25 ..     473     496 ..     472     590 .. 0.79
   2 !   14.0   0.0     9e-05     0.039       1      23 [.     721     743 ..     721     765 .. 0.85
   3 ?   -0.8   0.2       3.5   1.5e+03       8      34 ..     986    1021 ..     980    1033 .. 0.61

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00059
                 EEEEESTTSSHHHHHHHHHTSTEE CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgekai 25 
                  ++vG+   GKStL++a+ + k++
  EPX70557.1 473 YGVVGHNGCGKSTLLKAIADYKVE 496
                 589***************985443 PP

  == domain 2  score: 14.0 bits;  conditional E-value: 9e-05
                 EEEEEESTTSSHHHHHHHHHTST CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltgek 23 
                 +vai+G   +GKStLi+ l+ge+
  EPX70557.1 721 RVAILGPNGAGKSTLIKVLIGEV 743
                 69******************973 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 3.5
                  TTSSHHHHHHHHHT........S.TEEESSSTTSSS CS
    MMR_HSR1    8 pNvGKStLinaltg........e.kaivsdkpgtTr 34  
                  +N GKS + n  ++        + ++++++k+  Tr
  EPX70557.1  986 TNKGKSAVDNEKFEdlsekdlkKiESKTTKKKKLTR 1021
                  899999999988873332222123344444444444 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.0    0.0044       1.9     101     121 ..     472     492 ..     462     518 .. 0.84
   2 !   14.4   0.0   6.2e-05     0.027      88     126 ..     707     746 ..     688     765 .. 0.77
   3 ?   -1.7   0.0       5.3   2.3e+03      68     142 ..     949    1021 ..     928    1024 .. 0.73

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0044
                  EEEEECSTTSSHHHHHHHHCT CS
  RsgA_GTPase 101 tsvlvGqSGvGKStLinallp 121
                     +vG+ G GKStL++a++ 
   EPX70557.1 472 RYGVVGHNGCGKSTLLKAIAD 492
                  55689************9986 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 6.2e-05
                  TTHHHHHHHCTT.SEEEEECSTTSSHHHHHHHHCTT---- CS
  RsgA_GTPase  88 egleelkellkd.ktsvlvGqSGvGKStLinallpelelk 126
                  ++l++++  l+  + ++++G+ G+GKStLi++l++e   +
   EPX70557.1 707 KSLDDVTCGLSLsSRVAILGPNGAGKSTLIKVLIGEVIPQ 746
                  5566666666654678899**************9986544 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 5.3
                   HHHHHHHTTSEEEE--TTTHTTHHHHHHHCTTSEEEEECS.TTSSHHHHHHHHCTT-.----S-------------- CS
  RsgA_GTPase   68 lkeelealgyevllvsaktkegleelkellkdktsvlvGq.SGvGKStLinallpel.elktgevseklgrGkhTTt 142 
                   l+++++++g  v+++s +    +e +++l+ ++  v++G+ +  GKS++ n+  ++l e   +++ +k+ + k  T+
   EPX70557.1  949 LATAIRDWGGGVVMISHN----AEFVSALCPEQWHVVAGKlTNKGKSAVDNEKFEDLsEKDLKKIESKTTKKKKLTR 1021
                   667788888888888766....7778888888999999985778999998865554326667777777776666666 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1       7.2   3.2e+03     103     130 ..     304     334 ..     256     364 .. 0.48
   2 !    9.7   0.0    0.0024         1      29      47 ..     475     493 ..     463     591 .. 0.86
   3 !   11.9   0.0    0.0005      0.22      26     106 ..     721     814 ..     709     913 .. 0.69

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 7.2
      AAA_16 103 eala......avpelagaeasrllellkrll.all 130
                 e++a      +     +a+as+ l +l++++ a++
  EPX70557.1 304 ERIAqgaampE----VRALASHALTTLNKAAaAQA 334
                 22223322221....11111222222222221222 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.0024
      AAA_16  29 lsGesGvGKsslvrellra 47 
                 ++G+ G+GKs+l+++++++
  EPX70557.1 475 VVGHNGCGKSTLLKAIADY 493
                 89************99964 PP

  == domain 3  score: 11.9 bits;  conditional E-value: 0.0005
      AAA_16  26 lvllsGesGvGKsslvrellralekd..........g.giflrgkcdqlesa...ipysalaqalareellrqlldeaesaeleawrekleeala 106
                  v + G+ G GKs+l++ l  ++  +          + g++++  +++l++    +p s+++q     +  r++l++++ ++ +++r++l+++++
  EPX70557.1 721 RVAILGPNGAGKSTLIKVLIGEVIPQegrvfkhpnlRvGYVAQHAFHHLDQHlekTP-SQYIQWRYSGGQDREVLEKETRKLTDEDRAQLQREIT 814
                 5899************99998887776778888877435554444444422222233.2233322222333333333344455566666666655 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   0.0   0.00028      0.12      28      43 ..     475     490 ..     473     524 .. 0.91
   2 ?    6.8   0.0     0.011       4.9      19      43 ..     716     739 ..     707     840 .. 0.90
   3 ?    0.3   0.7         1   4.6e+02     215     252 ..     987    1027 ..     978    1049 .. 0.59

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00028
      AAA_15  28 liGkNnsGKSsileal 43 
                 ++G+N++GKS++l+a+
  EPX70557.1 475 VVGHNGCGKSTLLKAI 490
                 69*************9 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.011
      AAA_15  19 idlseeltvliGkNnsGKSsileal 43 
                 ++ls+    + G+N++GKS+++++l
  EPX70557.1 716 LSLSS-RVAILGPNGAGKSTLIKVL 739
                 56666.78899***********998 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 1
      AAA_15  215 ssllgklkekileealqekl...eeelteklkeiqeklkei 252 
                  ++ +++++++++e+ +++ l   e ++t+k k + ++ k++
  EPX70557.1  987 NKGKSAVDNEKFEDLSEKDLkkiESKTTKKKKLTRNEMKNK 1027
                  44555555555555544444444444444444444444444 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.0     0.001      0.46       4      69 ..     475     542 ..     472     555 .. 0.68
   2 !    9.6   0.0    0.0023         1       1      20 [.     721     740 ..     721     811 .. 0.66

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.001
      AAA_28   4 itGgestGKTtlleaLaargypvv..pEaareileeklakgedalpwvedllafaervleeqleeeaa 69 
                 ++G  ++GK+tll+a+a+ +++ +  pE + + +  ++ +ged++    d++a   ++ ++ + +e+a
  EPX70557.1 475 VVGHNGCGKSTLLKAIADYKVENFpaPEQVKTCFVAHSLQGEDTSICILDFVANDPALANMNVTREEA 542
                 67899*************98886667888888888887666654433345555555555555544444 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.0023
      AAA_28   1 kivitGgestGKTtlleaLa 20 
                 +++i+G+ ++GK+tl++ L 
  EPX70557.1 721 RVAILGPNGAGKSTLIKVLI 740
                 79**************9887 PP

>> DUF87  Helicase HerA, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0      0.33   1.5e+02      25      44 ..     472     491 ..     467     501 .. 0.88
   2 !   15.2   0.0     4e-05     0.017      22      48 ..     718     744 ..     710     752 .. 0.87
   3 ?   -0.0   0.2       1.8   7.9e+02     140     180 ..     999    1044 ..     967    1054 .. 0.61

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.33
       DUF87  25 HlAilgsTGsGKSntvavLl 44 
                 + +++g  G GKS++ + + 
  EPX70557.1 472 RYGVVGHNGCGKSTLLKAIA 491
                 679************99986 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 4e-05
       DUF87  22 vtrHlAilgsTGsGKSntvavLleell 48 
                 ++ ++Ailg  G+GKS++++vL+ e++
  EPX70557.1 718 LSSRVAILGPNGAGKSTLIKVLIGEVI 744
                 4889*******************9988 PP

  == domain 3  score: -0.0 bits;  conditional E-value: 1.8
       DUF87  140 depveklleelk.....kekeelrklknqaiarlldkledllrkgg 180 
                  +++ ek l++++     k+k++++++kn+ +++  + l +l + +g
  EPX70557.1  999 EDLSEKDLKKIEskttkKKKLTRNEMKNKERRARDRELAWLSSPKG 1044
                  3333333333334443455557777777777777777777766655 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.3   0.0   0.00057      0.25       5      27 ..     475     497 ..     471     588 .. 0.78
   2 ?    7.2   0.0      0.01       4.4       2      21 ..     721     740 ..     720     772 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00057
                 EEC-TTTCHHHHHHHHHHHHCTS CS
       NACHT   5 lqGeaGsGKTtLlqklalawaeg 27 
                 + G +G+GK+tLl+ +a+   e+
  EPX70557.1 475 VVGHNGCGKSTLLKAIADYKVEN 497
                 78**************9865554 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.01
                 CEEEEC-TTTCHHHHHHHHH CS
       NACHT   2 lvilqGeaGsGKTtLlqkla 21 
                  v++ G++G GK+tL++ l+
  EPX70557.1 721 RVAILGPNGAGKSTLIKVLI 740
                 689************99887 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.0     0.003       1.3      18      50 ..     459     491 ..     445     497 .. 0.84
   2 !    8.9   0.0    0.0015      0.65      12      58 ..     701     748 ..     690     751 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.003
                 HHHHHGGG-S-SEEEEEEE-TTSSHHHHHHHHH CS
        MeaB  18 llerllakaGraqvvGltGvPGaGkstlvealg 50 
                 ll++   +  r ++ G+ G  G Gkstl++a++
  EPX70557.1 459 LLNHTNLRLYRGHRYGVVGHNGCGKSTLLKAIA 491
                 666667777899****************99875 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0015
                 SH.HHHHHHHHHGGG-S-SEEEEEEE-TTSSHHHHHHHHHHHHHCTT- CS
        MeaB  12 rp.eakellerllakaGraqvvGltGvPGaGkstlvealglelrrrGk 58 
                 +p ++k+ l+ ++     + +v + G  GaGkstl++ l+ e++ +  
  EPX70557.1 701 YPgSSKKSLDDVTCGLSLSSRVAILGPNGAGKSTLIKVLIGEVIPQEG 748
                 44577888888888888899******************9988876554 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0    0.0069         3       3      26 ..     475     498 ..     474     531 .. 0.82
   2 !    9.0   0.0    0.0042       1.8       2      23 ..     723     744 ..     722     776 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0069
  RNA_helicase   3 lyGpsgeGKStlakeLakallkkl 26 
                   ++G++g+GKStl k +a+   +++
    EPX70557.1 475 VVGHNGCGKSTLLKAIADYKVENF 498
                   68*************987666555 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0042
  RNA_helicase   2 wlyGpsgeGKStlakeLakall 23 
                    + Gp+g GKStl+k L+ ++ 
    EPX70557.1 723 AILGPNGAGKSTLIKVLIGEVI 744
                   689*************998887 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.1    0.0031       1.3       3      21 ..     475     493 ..     473     588 .. 0.77
   2 ?    7.1   0.0     0.016         7       3      22 ..     724     743 ..     722     779 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0031
                 EESSTTSSHHHHHHHHHHH CS
         AAA   3 lyGppGtGKTllakavake 21 
                 ++G  G+GK++l ka+a  
  EPX70557.1 475 VVGHNGCGKSTLLKAIADY 493
                 689**************87 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.016
                 EESSTTSSHHHHHHHHHHHH CS
         AAA   3 lyGppGtGKTllakavakel 22 
                 + Gp G GK++l+k ++ e+
  EPX70557.1 724 ILGPNGAGKSTLIKVLIGEV 743
                 78**************9986 PP

>> CLASP_N  CLASP N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0      0.43   1.9e+02      95     126 ..      98     129 ..      95     147 .. 0.77
   2 !   14.2   0.0   5.4e-05     0.024      73     135 ..     158     219 ..     155     223 .. 0.93
   3 ?   -2.9   0.1         9   3.9e+03     188     221 ..     311     344 ..     310     348 .. 0.75

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.43
     CLASP_N  95 llptLlkllgdtKkiisqnanqalaallsnas 126
                 +lp++l+l +d  ++++++a++a ++ll+ ++
  EPX70557.1  98 YLPVMLDLFSDRGEVVRAAAKMATDSLLNILP 129
                 68999***************999888775444 PP

  == domain 2  score: 14.2 bits;  conditional E-value: 5.4e-05
     CLASP_N  73 gchllkelaiqlkeqldpmveillptLlkllgdtKkiisqnanqalaallsnasfsprilqvl 135
                 +++ll  la+++ ++++  + +l+p++ +++ dtK  +s +a  ++ +l++ ++ +++i+ ++
  EPX70557.1 158 ALELLGSLAKTFRNAIAVAMGSLIPCIRERMHDTKGEVSRAAIKCMLDLCTVVE-NNDIIPHI 219
                 7889*************************************************9.99986665 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 9
     CLASP_N 188 anptVRetaRstfweffkvwPsrAksllssldpk 221
                 a p+VR  a +++ ++ k + ++A +  ++++ +
  EPX70557.1 311 AMPEVRALASHALTTLNKAAAAQAAKAANDAERQ 344
                 6788888888888888888888887777666655 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.6   0.0    0.0023         1      10      45 ..     475     509 ..     472     616 .. 0.70
   2 ?    6.3   0.0     0.025        11       9      25 ..     723     739 ..     719     824 .. 0.91

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.0023
      AAA_22  10 vtGesGtGKTtllrrlleqldeeakaeeerpevvfv 45 
                 v+G+ G+GK+tll+ +++ ++e ++++ e++++ fv
  EPX70557.1 475 VVGHNGCGKSTLLKAIADYKVE-NFPAPEQVKTCFV 509
                 79**************998754.4444433333333 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.025
      AAA_22   9 vvtGesGtGKTtllrrl 25 
                 ++ G+ G+GK+tl++ l
  EPX70557.1 723 AILGPNGAGKSTLIKVL 739
                 799**********9976 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.0     0.022       9.6       3      82 ..     475     589 ..     474     612 .. 0.63
   2 !    8.8   0.0    0.0053       2.3       1      19 [.     722     746 ..     722     820 .. 0.63

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.022
      AAA_18   3 ltGtpGvGKttlakeLskrl.gf..........................gvnlrdvakenglllevdpe....aldeskrldedkldklldaleenss. 69 
                 + G  G+GK+tl k++++   ++                           ++ +d a  n+ ++ ++++     +  ++ +++d +++l+ +++   + 
  EPX70557.1 475 VVGHNGCGKSTLLKAIADYKvENfpapeqvktcfvahslqgedtsicilDFVANDPALANMNVTREEAAaalkSVGFTEDMQKDAVASLSGGWKMKLEl 573
                 78999***********77643334777777777777777777777777766666666666666666666655555555555555555555555555546 PP

      AAA_18  70 ...aleegknlvidgh 82 
                     l++++ l++d  
  EPX70557.1 574 araMLQKADILLLDEP 589
                 6665666666666655 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.0053
      AAA_18   1 IlltGtpGvGKttlakeL......s 19 
                 +++ G+ G+GK+tl k L      +
  EPX70557.1 722 VAILGPNGAGKSTLIKVLigevipQ 746
                 689*************994444431 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0     0.022       9.6       3      20 ..     475     492 ..     474     511 .. 0.89
   2 !    8.3   0.0    0.0049       2.2       1      23 [.     722     744 ..     722     822 .. 0.88

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.022
                 EEEBTTTTHHHHHHHHHT CS
   Dynamin_N   3 vvGsqSsGKSSvlnaLlg 20 
                 vvG+   GKS++l a+  
  EPX70557.1 475 VVGHNGCGKSTLLKAIAD 492
                 9**************986 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.0049
                 EEEEEBTTTTHHHHHHHHHTS-- CS
   Dynamin_N   1 iavvGsqSsGKSSvlnaLlgedi 23 
                 +a++G   +GKS+++  L+ge i
  EPX70557.1 722 VAILGPNGAGKSTLIKVLIGEVI 744
                 7999****************976 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1       4.4   1.9e+03      49      81 ..     328     361 ..     309     392 .. 0.63
   2 ?    5.1   0.2     0.037        16      23      43 ..     475     495 ..     467     617 .. 0.69
   3 !    8.5   0.0    0.0035       1.5      21      46 ..     722     748 ..     714     773 .. 0.81
   4 ?   -1.6   0.0       4.3   1.9e+03      86     122 ..     926     963 ..     908     967 .. 0.78

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 4.4
      AAA_30  49 viglAptgkaAkvLae.elgieastiakllkrlk 81 
                  +++A  +kaA++ ++ ++    s+i++++++++
  EPX70557.1 328 KAAAAQAAKAANDAERqAVSGVRSRIHQFVTEHA 361
                 3456666666666554134446667888887776 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.037
      AAA_30  23 ltGpAGtGKttalkalreawe 43 
                 ++G  G GK+t+lka+++   
  EPX70557.1 475 VVGHNGCGKSTLLKAIADYKV 495
                 7999***********987654 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.0035
      AAA_30  21 avltGpAGtGKttalkal.reaweaag 46 
                 +++ Gp G+GK+t++k+l  e++ ++g
  EPX70557.1 722 VAILGPNGAGKSTLIKVLiGEVIPQEG 748
                 6789************99778888877 PP

  == domain 4  score: -1.6 bits;  conditional E-value: 4.3
      AAA_30  86 lepgtllivDEagmv.dtkqlaallkaaekagakvilv 122
                 +++ +ll+ DE     d + l  l++a+++ g  v+++
  EPX70557.1 926 WNNPQLLVLDEPTNFlDRDALGGLATAIRDWGGGVVMI 963
                 55669******765449999999999999988888776 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.0     0.012       5.3       4      20 ..     475     491 ..     474     501 .. 0.90
   2 ?    6.9   0.0     0.015       6.7       4      20 ..     724     740 ..     722     800 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.012
      AAA_33   4 lvGlpGsGKstlaerll 20 
                 +vG++G+GKstl++ ++
  EPX70557.1 475 VVGHNGCGKSTLLKAIA 491
                 69**********99765 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.015
      AAA_33   4 lvGlpGsGKstlaerll 20 
                 + G++G+GKstl++ l+
  EPX70557.1 724 ILGPNGAGKSTLIKVLI 740
                 67**********99886 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0       2.7   1.2e+03      32      51 ..      98     117 ..      57     129 .. 0.60
   2 !   12.9   0.0   0.00025      0.11       1      58 [.     138     206 ..     138     237 .. 0.74
   3 ?    3.2   0.9      0.26   1.1e+02      30      69 ..     297     337 ..     290     353 .. 0.71
   4 ?   -1.1   0.1       5.8   2.6e+03      47      69 ..     538     565 ..     532     576 .. 0.73

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 2.7
      HEAT_2  32 alpaLvellededpavRraa 51 
                 +lp +++l +d  + vR+aa
  EPX70557.1  98 YLPVMLDLFSDRGEVVRAAA 117
                 46666677766666666666 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 0.00025
      HEAT_2   1 ldaLlqalen.dpdpevrraairaLgrignp..........ealpaLvellededpavRraaaeaLgai 58 
                 ++ L+++l +    +  + aa++ Lg+++ +          +++p+++e + d++ +v raa++ +  +
  EPX70557.1 138 IPSLIEYLNSsAVKWPSKVAALELLGSLAKTfrnaiavamgSLIPCIRERMHDTKGEVSRAAIKCMLDL 206
                 5789999944356667899*******66665566688888899*********************88554 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.26
      HEAT_2  30 pealpaLvelleded.pavRraaaeaLgaigdpealpaLke 69 
                 pe++p + ++++ +  p+vR+ a +aL  +   +a++a k+
  EPX70557.1 297 PELIPEVERIAQGAAmPEVRALASHALTTLNKAAAAQAAKA 337
                 56777778888554438888888888888877777766555 PP

  == domain 4  score: -1.1 bits;  conditional E-value: 5.8
      HEAT_2  47 vRraaaeaLgaig.....dpealpaLke 69 
                 +R++aa aL  +g      ++a+++L  
  EPX70557.1 538 TREEAAAALKSVGftedmQKDAVASLSG 565
                 6888888888777655444778888765 PP

>> AAA_27  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.0    0.0057       2.5      31      49 ..     475     493 ..     462     513 .. 0.88
   2 ?    6.3   0.0     0.015       6.4      31      45 ..     724     738 ..     715     803 .. 0.86

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0057
      AAA_27  31 iyGpNEAGKstalrAisdl 49 
                 ++G N  GKst+l+Ai d 
  EPX70557.1 475 VVGHNGCGKSTLLKAIADY 493
                 89**************996 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.015
      AAA_27  31 iyGpNEAGKstalrA 45 
                 i+GpN AGKst+++ 
  EPX70557.1 724 ILGPNGAGKSTLIKV 738
                 89*********9864 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.0    0.0009      0.39      24     115 ..     474     592 ..     467     630 .. 0.61
   2 ?    3.3   0.0     0.087        38      22      39 ..     721     738 ..     706     751 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.0009
                 EEEESTTSSHHHHHHHHCCSHCCCCCCBTEEEEE...............................EEESXXHHHHHHHXXHHHHHCCCTTSSSS-STTS CS
      NB-ARC  24 alvGmgGvGKttlakqilnksdevegrFdsvawv...............................vvsktdkseeiletilkeLslseddleekeeves 91 
                 ++vG  G+GK+tl+k i        ++F+   +v                                v+++                             
  EPX70557.1 474 GVVGHNGCGKSTLLKAIADY---KVENFPAPEQVktcfvahslqgedtsicildfvandpalanmNVTREEAAA------------------------A 545
                 699************99877...556787777776676666444444444444444444433322222222222........................1 PP

                 .......................HHHHHHHHCCCTTEEEEEEEE-SH CS
      NB-ARC  92 .......................lkrklvrlLltkrfllvlDDVwee 115
                                        +k +l r++l+k  +l+lD   ++
  EPX70557.1 546 lksvgftedmqkdavaslsggwkMKLELARAMLQKADILLLDEPTNH 592
                 33444444444444444556666888888888888888888865544 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.087
                 EEEEEESTTSSHHHHHHH CS
      NB-ARC  22 vvalvGmgGvGKttlakq 39 
                  va+ G  G GK+tl+k 
  EPX70557.1 721 RVAILGPNGAGKSTLIKV 738
                 589************985 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.0     0.011       4.7       6      27 ..     474     495 ..     470     524 .. 0.84
   2 ?    6.2   0.0     0.022       9.8       5      27 ..     722     744 ..     719     781 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.011
      AAA_14   6 vitGaRrvGKTtllkqlikell 27 
                  ++G   +GK+tllk +++ + 
  EPX70557.1 474 GVVGHNGCGKSTLLKAIADYKV 495
                 689999**********998776 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.022
      AAA_14   5 lvitGaRrvGKTtllkqlikell 27 
                 ++i G+  +GK+tl+k li e +
  EPX70557.1 722 VAILGPNGAGKSTLIKVLIGEVI 744
                 6899************9998876 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.036        16      59      75 ..     476     492 ..     464     498 .. 0.87
   2 !    8.1   0.0     0.003       1.3      55      97 ..     721     771 ..     710     782 .. 0.78

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.036
      DUF815  59 wGarGtGKSslvkalln 75 
                 +G+ G+GKS+l+ka+  
  EPX70557.1 476 VGHNGCGKSTLLKAIAD 492
                 79************975 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.003
      DUF815  55 nvLLwGarGtGKSslvkallneyaeeg........Lrlievekedlkelpk 97 
                  v + G  G+GKS+l+k l+ e+  ++        Lr+  v+++  ++l++
  EPX70557.1 721 RVAILGPNGAGKSTLIKVLIGEVIPQEgrvfkhpnLRVGYVAQHAFHHLDQ 771
                 57789****************999887677777777777777776666655 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0     0.023        10      25      42 ..     475     492 ..     466     503 .. 0.86
   2 !    7.4   0.0    0.0085       3.7      24      56 ..     723     755 ..     714     825 .. 0.70

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.023
    ATPase_2  25 iYGpegsGKtaLlkeiie 42 
                 + G  g+GK++Llk i+ 
  EPX70557.1 475 VVGHNGCGKSTLLKAIAD 492
                 789***********9986 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0085
    ATPase_2  24 fiYGpegsGKtaLlkeiienledkdkyviyyia 56 
                  i Gp g GK++L+k +i +   ++ +v+   +
  EPX70557.1 723 AILGPNGAGKSTLIKVLIGEVIPQEGRVFKHPN 755
                 699*************99887655554544444 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0     0.053        23      50      70 ..     475     495 ..     469     518 .. 0.85
   2 ?    7.8   0.0    0.0066       2.9      49      72 ..     723     746 ..     707     768 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.053
       Rad17  50 isGPsGCgkstvvkvLskelg 70 
                 + G  GCgkst +k ++   +
  EPX70557.1 475 VVGHNGCGKSTLLKAIADYKV 495
                 57999*********9986554 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0066
       Rad17  49 LisGPsGCgkstvvkvLskelgik 72 
                  i GP G gkst +kvL  e  ++
  EPX70557.1 723 AILGPNGAGKSTLIKVLIGEVIPQ 746
                 588**************8877665 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0      0.34   1.5e+02       1      30 [.     137     168 ..     137     169 .. 0.83
   2 ?    9.9   0.1    0.0021      0.94       1      30 [.     180     209 ..     180     210 .. 0.95
   3 ?    0.7   0.0       1.9   8.3e+02      14      27 ..     313     326 ..     299     329 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.34
                 HHHHHHHHHT-..SSHHHHHHHHHHHHHHHHC CS
        HEAT   1 llPlllkllsD..pspeVReaAakaLgalaev 30 
                 l+P l++ l++    +    aA++ Lg la+ 
  EPX70557.1 137 LIPSLIEYLNSsaVKWPSKVAALELLGSLAKT 168
                 78999999988786666699********9985 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.0021
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalaev 30 
                 l+P++ + ++D+  eV +aA+k++ +l+ v
  EPX70557.1 180 LIPCIRERMHDTKGEVSRAAIKCMLDLCTV 209
                 79*************************986 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 1.9
                 HHHHHHHHHHHHHH CS
        HEAT  14 peVReaAakaLgal 27 
                 peVR+ A  aL++l
  EPX70557.1 313 PEVRALASHALTTL 326
                 9**********987 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.0     0.011       4.6       5      21 ..     477     493 ..     475     515 .. 0.81
   2 ?    4.1   0.0     0.077        34       4      25 ..     725     744 ..     722     780 .. 0.64

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.011
  Viral_helicase1   5 GvpGcGKStlirkllrt 21 
                      G  GcGKStl++ +++ 
       EPX70557.1 477 GHNGCGKSTLLKAIADY 493
                      667*********99976 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.077
  Viral_helicase1   4 hGvpGcGKStlirkllrtslil 25 
                       G  G+GKStli+ l+ +  ++
       EPX70557.1 725 LGPNGAGKSTLIKVLIGE--VI 744
                      5667*********99988..33 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.075        33       4      26 ..     475     497 ..     472     523 .. 0.82
   2 ?    6.8   0.0     0.017       7.6       1      22 [.     721     742 ..     721     771 .. 0.89

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.075
                 EESSTTSSHHHHHHCHCT-CCC- CS
         Roc   4 lvGdsgvGKtsllkrfvedkfse 26 
                 +vG +g GK++llk + + k+++
  EPX70557.1 475 VVGHNGCGKSTLLKAIADYKVEN 497
                 79************999877764 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.017
                 EEEEESSTTSSHHHHHHCHCT- CS
         Roc   1 KvvlvGdsgvGKtsllkrfved 22 
                 +v ++G +g+GK++l+k ++ +
  EPX70557.1 721 RVAILGPNGAGKSTLIKVLIGE 742
                 5899*************99865 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0      0.14        61       4      22 ..     472     490 ..     469     499 .. 0.85
   2 ?    7.8   0.0    0.0056       2.4       4      22 ..     721     739 ..     718     748 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.14
      AAA_24   4 kiliyGpsgiGKTtlakel 22 
                 ++ ++G +g GK+tl+k +
  EPX70557.1 472 RYGVVGHNGCGKSTLLKAI 490
                 7889***********9976 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0056
      AAA_24   4 kiliyGpsgiGKTtlakel 22 
                 +++i Gp+g+GK+tl+k l
  EPX70557.1 721 RVAILGPNGAGKSTLIKVL 739
                 89*************9865 PP

>> MobB  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0      0.23     1e+02       3      19 ..     474     490 ..     473     506 .. 0.89
   2 ?    7.6   0.0    0.0074       3.2       2      73 ..     722     804 ..     721     820 .. 0.65

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.23
        MobB   3 givgksgsGKTtLlekl 19 
                 g+vg++g+GK tLl+ +
  EPX70557.1 474 GVVGHNGCGKSTLLKAI 490
                 689***********976 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0074
        MobB   2 lgivgksgsGKTtLleklipe........lkarglrvgti.Khahhgfd..vdkpgkDsyrhrkAGAkevlvaskerlalike 73 
                 ++i g +g+GK tL++ li e        +k+ +lrvg++  ha h++d  ++k+     + r +G +   v  ke  +l+ e
  EPX70557.1 722 VAILGPNGAGKSTLIKVLIGEvipqegrvFKHPNLRVGYVaQHAFHHLDqhLEKTPSQYIQWRYSGGQDREVLEKETRKLTDE 804
                 67999*************97621112222566678888774577777763344444455566666666666666666666665 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0      0.12        53       4      21 ..     475     492 ..     472     500 .. 0.83
   2 ?   -1.9   0.0       6.3   2.8e+03      81     103 ..     566     588 ..     538     589 .. 0.77
   3 ?    6.0   0.0     0.024        10       1      22 [.     721     742 ..     721     751 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.12
                 EE--TTSSHHHHHHHHHH CS
    NTPase_1   4 iTGppGvGKtTlvkkvle 21 
                 + G+ G GK+Tl+k +++
  EPX70557.1 475 VVGHNGCGKSTLLKAIAD 492
                 789**********99987 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 6.3
                 HHHHHHHHHHHHHHHH-EEEE-- CS
    NTPase_1  81 feelalealrkalseadviviDE 103
                  +++ le  r +l++ad++++DE
  EPX70557.1 566 GWKMKLELARAMLQKADILLLDE 588
                 5677788888888*********9 PP

  == domain 3  score: 6.0 bits;  conditional E-value: 0.024
                 EEEEE--TTSSHHHHHHHHHHH CS
    NTPase_1   1 kvfiTGppGvGKtTlvkkvlel 22 
                 +v+i Gp G GK+Tl+k ++ +
  EPX70557.1 721 RVAILGPNGAGKSTLIKVLIGE 742
                 58899***********988765 PP

>> ATP-synt_ab  ATP synthase alpha/beta family, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0     0.001      0.45      11      40 ..     467     496 ..     463     553 .. 0.84
   2 ?   -0.3   0.0       1.6   7.1e+02      14      35 ..     719     740 ..     708     750 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.001
                  EBTT-EEEEEESTTSSHHHHHHHHHHHSST CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab  11 ivqGqrtlipgafgvGktvisqslskqsns 40 
                  + +G r +++g +g+Gk++++++++ ++ +
   EPX70557.1 467 LYRGHRYGVVGHNGCGKSTLLKAIADYKVE 496
                  579**********************99644 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 1.6
                  T-EEEEEESTTSSHHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab  14 GqrtlipgafgvGktvisqsls 35 
                    r++i+g +g Gk+++++ l+
   EPX70557.1 719 SSRVAILGPNGAGKSTLIKVLI 740
                  57899************98876 PP

>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0     0.073        32       1      19 [.     475     493 ..     475     500 .. 0.89
   2 ?    6.1   0.0     0.019       8.4       1      31 [.     724     755 ..     724     759 .. 0.79

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.073
  ATP_bind_1   1 vvGpaGsGKttfvgalsei 19 
                 vvG+ G GK+t+ +a++++
  EPX70557.1 475 VVGHNGCGKSTLLKAIADY 493
                 89************99987 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.019
  ATP_bind_1   1 vvGpaGsGKttfvgals.eilelrgrsvavvN 31 
                 ++Gp G+GK+t+++ l+ e+++++gr ++  N
  EPX70557.1 724 ILGPNGAGKSTLIKVLIgEVIPQEGRVFKHPN 755
                 68***********9875378888887766555 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0         1   4.4e+02      98     131 ..     263     296 ..     227     307 .. 0.79
   2 ?    2.1   0.0      0.32   1.4e+02      52      73 ..     475     496 ..     467     507 .. 0.88
   3 ?    4.6   0.0     0.055        24      49      77 ..     721     749 ..     704     779 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 1
   IstB_IS21  98 klaralkrllkvdllilDdlgllpldqaeaellf 131
                  la++ + +l+++++i D+l  l  d aea++++
  EPX70557.1 263 ALAERSQIMLRMTVIITDNLCKLVPDPAEASDFL 296
                 5677788899**********99999999988876 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.32
   IstB_IS21  52 llGpsGvGKshlaialgveavr 73 
                 ++G+ G GKs l  a++   v+
  EPX70557.1 475 VVGHNGCGKSTLLKAIADYKVE 496
                 79*************9987665 PP

  == domain 3  score: 4.6 bits;  conditional E-value: 0.055
   IstB_IS21  49 nivllGpsGvGKshlaialgveavragls 77 
                  +++lGp G+GKs l   l  e + ++ +
  EPX70557.1 721 RVAILGPNGAGKSTLIKVLIGEVIPQEGR 749
                 689**********9988777666665555 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0      0.15        67      32      53 ..     469     490 ..     461     515 .. 0.79
   2 ?    6.2   0.0     0.015       6.5      34      88 ..     720     775 ..     713     781 .. 0.77

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.15
       AAA_7  32 nkkpvllvGptGtGKtviikdl 53 
                 +++   +vG+ G+GK++++k +
  EPX70557.1 469 RGHRYGVVGHNGCGKSTLLKAI 490
                 5667779**********99875 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.015
       AAA_7  34 kpvllvGptGtGKtviikd.llkkldkekylsltinfsaqtsanqlqdiiesklek 88 
                   v + Gp G GK+++ik  + + +++e  ++++ n+     a++  + ++++lek
  EPX70557.1 720 SRVAILGPNGAGKSTLIKVlIGEVIPQEGRVFKHPNLRVGYVAQHAFHHLDQHLEK 775
                 678999************95555666777777777777777777777777777777 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.057        25       6      25 ..     475     494 ..     471     499 .. 0.87
   2 ?    4.5   0.0     0.061        27       2      26 ..     720     744 ..     719     785 .. 0.87

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.057
   PduV-EutP   6 liGkvgsGKttLtqalkgee 25 
                 ++G+ g+GK tL +a+ + +
  EPX70557.1 475 VVGHNGCGKSTLLKAIADYK 494
                 69*************98865 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.061
   PduV-EutP   2 kkilliGkvgsGKttLtqalkgeel 26 
                 +++ ++G+ g+GK tL + l ge +
  EPX70557.1 720 SRVAILGPNGAGKSTLIKVLIGEVI 744
                 58999*************9988654 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0     0.097        42       4      21 ..     474     491 ..     472     500 .. 0.84
   2 ?    5.1   0.0     0.034        15       4      21 ..     723     740 ..     720     750 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.097
                 EEEESTTCCHHHHHHHHH CS
        cobW   4 vltGflGsGKTtLlnhll 21 
                 +++G  G GK+tLl+++ 
  EPX70557.1 474 GVVGHNGCGKSTLLKAIA 491
                 689***********9987 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.034
                 EEEESTTCCHHHHHHHHH CS
        cobW   4 vltGflGsGKTtLlnhll 21 
                  + G+ G+GK+tL++ l+
  EPX70557.1 723 AILGPNGAGKSTLIKVLI 740
                 6889**********9887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1057 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1320  (0.0736237); expected 358.6 (0.02)
Passed bias filter:                      877  (0.0489152); expected 358.6 (0.02)
Passed Vit filter:                       124  (0.00691617); expected 17.9 (0.001)
Passed Fwd filter:                        41  (0.0022868); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              41  [number of targets reported over threshold]
# CPU time: 1.02u 0.32s 00:00:01.34 Elapsed: 00:00:00.48
# Mc/sec: 6687.82
//
Query:       EPX70558.1  [L=396]
Description: arginine-tRNA protein transferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.7e-50  169.2   3.3    1.2e-49  168.4   3.3    1.4  1  ATE_C     Arginine-tRNA-protein transferase, C terminus
    2.1e-24   85.7   4.4    2.4e-24   85.5   2.7    1.9  2  ATE_N     Arginine-tRNA-protein transferase, N terminus


Domain annotation for each model (and alignments):
>> ATE_C  Arginine-tRNA-protein transferase, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  168.4   3.3   1.3e-53   1.2e-49       1     133 [.     141     271 ..     141     272 .. 0.97

  Alignments for each domain:
  == domain 1  score: 168.4 bits;  conditional E-value: 1.3e-53
       ATE_C   1 ekfeLykkYqkavhgdkeeksseesfarflvdsplseeeisakekklgsyhqeyrldgkLvavgvvDvlpeglSsvYffydpdyaklslGklsiLreie 99 
                 ekfeL+kkYq++vh+++ee++++++f+rfl++spl ++   +++kk+gs+hq yr++g+Lvavgv+D+lp+++SsvY+fydp+++++slG++s+ rei 
  EPX70558.1 141 EKFELFKKYQTSVHHESEEEVTKKGFERFLCSSPLIKD--VNSNKKCGSFHQMYRINGTLVAVGVLDLLPHAVSSVYLFYDPEFSSYSLGRISACREIL 237
                 79********************************8665..678999***************************************************** PP

       ATE_C 100 larelglkyyylGYyiescpkmrYKaeykpsell 133
                 la e+++++yy+GYyi++c+kmrYK++y+ps+ll
  EPX70558.1 238 LAAEENYNFYYMGYYIHKCKKMRYKGDYSPSYLL 271
                 *******************************998 PP

>> ATE_N  Arginine-tRNA-protein transferase, N terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.5   2.7   2.7e-28   2.4e-24       2      81 .]      16      86 ..      15      86 .. 0.95
   2 ?   -1.7   0.0      0.44     4e+03      24      46 ..     146     168 ..     111     172 .. 0.61

  Alignments for each domain:
  == domain 1  score: 85.5 bits;  conditional E-value: 2.7e-28
       ATE_N  2 sCgYckgkkerkavssekesatvgvsaesltvedyqelldrGfRRsGkylYkpdckrtCcpqytiRldveefkpsksqkr 81
                +CgYc++ + ++         ++g+ +++l+++ yq+l+drG+RRsG+ylYkp+++ +Cc++ytiRl+++ef++sk qk+
  EPX70558.1 16 DCGYCRSGEPTE---------HFGLLSKELKCDAYQKLVDRGWRRSGHYLYKPNLRTSCCRLYTIRLNADEFQISKVQKK 86
                8*******9987.........47999999**************************************************8 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.44
       ATE_N  24 vgvsaesltvedyqelldrGfRR 46 
                 ++   +s++ e  +e +++Gf R
  EPX70558.1 146 FKKYQTSVHHESEEEVTKKGFER 168
                 33344556666677777777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (396 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       749  (0.0417759); expected 358.6 (0.02)
Passed bias filter:                      494  (0.0275531); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 2913.07
//
Query:       EPX70559.1  [L=651]
Description: CMGC/RCK/MAK protein kinase Pit1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.9e-61  206.4   0.0    1.2e-60  205.1   0.0    1.7  2  Pkinase      Protein kinase domain
      6e-31  107.7   0.0    1.1e-30  106.8   0.0    1.3  1  Pkinase_Tyr  Protein tyrosine kinase
     0.0095   15.3   0.0      0.018   14.4   0.0    1.4  1  Kdo          Lipopolysaccharide kinase (Kdo/WaaP) family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  205.1   0.0   2.1e-64   1.2e-60       2     264 .]      33     331 ..      32     331 .. 0.90
   2 ?   -2.8   0.1      0.53   3.2e+03     145     166 ..     408     429 ..     405     430 .. 0.82

  Alignments for each domain:
  == domain 1  score: 205.1 bits;  conditional E-value: 2.1e-64
                 EEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS.CTTB--EEEEEEESSEEE.EEEE--TTEBHHHHHH..HHSS-- CS
     Pkinase   2 ekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklk.hpnivrlyevfeekdely.lvleyveggeladlle..rkgsls 96 
                 ++++k+G G+fG+V  a++k + k vA+K +kk+ +k ++  + lrE++ l +l+ h+niv++++ + +++  + +v+e++e + l++l++  r++ +s
  EPX70559.1  33 SVVQKVGDGTFGSVHLATRKGSMKVVAIKSMKKKLMKISD-AARLREVHSLLHLSeHDNIVNIFDLYIDQSFCLhIVMEFLEFN-LFQLINsrRDKPFS 129
                 6789******************************999877.5899****9999999***********99887545*******77.999999877788** PP

                 HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEE..TTTE...EEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHH.TTSCBSHHHHHHHHHHHHHH CS
     Pkinase  97 eeeakkiakqilegleylHskgiiHrDlKpeNiLid..ekge...lKitDFGlakelessskltsfvgtseYlAPEvl.keneyskkvDvWslGvilye 189
                  + +++i++qi++g+ ++H++g++HrD+KpeNiL++  e+ +   +Ki+DFGla+e++ss ++t++v t++Y+APE+l +++ ys +vD++++G++ +e
  EPX70559.1 130 YNSVRDIMSQIFKGIGHIHANGFFHRDMKPENILVSpiENSDvykVKIADFGLAREINSSPPYTEYVSTRWYRAPELLlRDSYYSCPVDIYAAGCMAFE 228
                 ************************************644444999*********************************899999*************** PP

                 HHHSS-STTTSSHHHHHHHHHHTHHHHHHHCT.....SHH...HHHTTS......................................-HHHHHHHHHHT CS
     Pkinase 190 lltgkppfsgekgkekvekeldqlekilkilg.....etkeklpeasei......................................seeakdllkkll 245
                 + t +p+f+   g +    +ldql ki++ilg              +++                                      +  + ++l++ll
  EPX70559.1 229 IATLQPIFP---GMD----DLDQLYKICEILGspddeS--------QKMgfggggtwkqaekltkdlgiilpksaplnlrelfsppwNGAFASMLTELL 312
                 *********...666....8999999999999433320........233455677777778889999******************************** PP

                 -SSGCCSTTHHHHHTSGGG CS
     Pkinase 246 kkdpkkRltaeellqhpyl 264
                 +++p  R++a+ +l+ +++
  EPX70559.1 313 QWNPDARPSAQACLELDFF 331
                 **************98887 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.53
                 SEESSSSCSBCTTTSCGGGS-H CS
     Pkinase 145 akelessskltsfvgtseYlAP 166
                 a++ ++s+k+++ + t+ Y++P
  EPX70559.1 408 ANKSKKSTKMSQTISTPMYRPP 429
                 67777888899********999 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.8   0.0   1.8e-34   1.1e-30       3     211 ..      34     241 ..      32     259 .. 0.86

  Alignments for each domain:
  == domain 1  score: 106.8 bits;  conditional E-value: 1.8e-34
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS.-BTTB--EEEEEE.SSSSEEEEEE--TTEBHHHHHHHTCTT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkkl.khpnivkllgvct.keepllivteyvkgGdLlkfLrkkeke 98 
                  + +k+G G+fG+V+ +t k     +   Va+K++k++ ++ + ++ l+e++ + +l +h+niv++  +++ ++  l iv+e+++  +L + +++++++
   EPX70559.1  34 VVQKVGDGTFGSVHLATRK----GSMKVVAIKSMKKKLMKISDAARLREVHSLLHLsEHDNIVNIFDLYIdQSFCLHIVMEFLEF-NLFQLINSRRDK 126
                  6789**************9....77788******************************************4555599******98.6888888888** PP

                  TSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE.....TTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS.-HHHHHHSE.EEHHHHHH CS
  Pkinase_Tyr  99 kltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse.....nkvvkisDfGLardiekddeyvkkeeaklpvkWm.apEslkekk.ftsksDvW 189
                  +++++++ +++ q+ kG+ +++++ + Hrd+   N+L+s        +vki+DfGLar+i+++  y+    + ++ +W+ apE l + + ++   D++
   EPX70559.1 127 PFSYNSVRDIMSQIFKGIGHIHANGFFHRDMKPENILVSPiensdVYKVKIADFGLAREINSSPPYT----EYVSTRWYrAPELLLRDSyYSCPVDIY 220
                  **************************************9655554669************6666665....567778877***87555439999**** PP

                  HHHHHHHHHHTTSSGTTTTSHH CS
  Pkinase_Tyr 190 sfGvllwEiftlgespypglkn 211
                  + G + +Ei+tl +  +pg+++
   EPX70559.1 221 AAGCMAFEIATL-QPIFPGMDD 241
                  **********94.555677754 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   3.1e-06     0.018     114     170 ..     125     184 ..     106     189 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 3.1e-06
         Kdo 114 e..laeelkrallkavgrliaklhragvnHadlyaknillqqee.eeeaeiwliDldkar 170
                 +  ++ ++ r ++ ++ + i  +h+ g  H+d+ + nil+   e ++  ++ + D+  ar
  EPX70559.1 125 DkpFSYNSVRDIMSQIFKGIGHIHANGFFHRDMKPENILVSPIEnSDVYKVKIADFGLAR 184
                 33567778899999***************************9887999999999997665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (651 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       763  (0.0425568); expected 358.6 (0.02)
Passed bias filter:                      429  (0.0239277); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.42
# Mc/sec: 4681.71
//
Query:       EPX70560.1  [L=444]
Description: alpha-1,6- mannanase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-41  143.4  10.0    1.6e-41  143.1  10.0    1.1  1  Glyco_hydro_76  Glycosyl hydrolase family 76
     0.0067   15.7   0.5       0.11   11.7   0.1    2.4  3  GlcNAc_2-epim   N-acylglucosamine 2-epimerase (GlcNAc 2-epime
  ------ inclusion threshold ------
       0.37    9.6   2.1        0.6    9.0   0.9    1.8  2  NADase_NGA      Nicotine adenine dinucleotide glycohydrolase 


Domain annotation for each model (and alignments):
>> Glyco_hydro_76  Glycosyl hydrolase family 76
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.1  10.0   2.7e-45   1.6e-41      23     299 ..      30     321 ..      10     361 .. 0.81

  Alignments for each domain:
  == domain 1  score: 143.1 bits;  conditional E-value: 2.7e-45
                     C...TCTCBSCES....-GHHHHHHHHHHHHHHHHHCT..TCCCHHHHHHHHHCCCTCEE-.SSSTTCTCSSEHHHHHH..HHHHHHHHHHH... CS
  Glyco_hydro_76  23 g...gtpgnlpdp....yywWeagalfgalidywrltg..dstyndlitqallaqagenyd.ympanqsrtegnDDqaf..wglaamtaaernfp 105
                     g   +++g+++d     y +W+ +++++a+ d  ++t+  ++++++++ q l+ +++++y+ ++++++ +  gn D +f   +  a++ a+++++
      EPX70560.1  30 GsaeNVSGTYDDGgshiYLVWSVAVYAEAMADSLKFTNkyEKKFENVF-QCLKRYWSPEYNaCCASYYFQ--GNNDVYFddNAQVAIALATAGYY 121
                     2333666666555777799*******************4444555554.358889999988799999987..55555554444444455555554 PP

                     ....H--HHHHHHHHHHHHHHHHC.B-SCSCCS-BBSEC..ESS--SEEEHHHHHHHHHHHHHHHHHH....--CHHHHHHHHHHHHHHHHSCSB CS
  Glyco_hydro_76 106 ep..tdepswLalAqavfntqasr.wdeetcgGGlrWqiftwnsgydyknsisngplfqlaarLaryt....gnetYlewAekvwdWvedvglid 193
                     ++  ++++++L++A+a++ +++++ w++++  GG+ W++++ ++ +   n++s+++   +a+rLa++     ++++++++A+++++W+e+ +l+ 
      EPX70560.1 122 TSnsSRKKHYLDRAEAIIAFIINQgWNQQK--GGVAWHVNSGSPPHANLNACSTAMCSLAALRLAYAVddpkKKQQLVTFAWNCVQWIES-NLV- 212
                     44459******************99***96..***********************************989988999**************.899. PP

                     TTTS-B-SEEETTTCCEEEE---HHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHCEEC...TTEEEEEE-TTSTTCCTTHHHHHHHHH CS
  Glyco_hydro_76 194 dedwlvyDgasvednctdinklqwtYnqGtylsgaaylynaTgdekWldrvkgllnatlstffpd...gnilyevacepsekcnnDqrsFkgila 285
                     d ++lv+Dg+s +++ +d++ +++tYn+G +l+ +a+l  +    k l +++++ +  +++   +   ++ +y+++c+++ k+++D+++F+++l+
      EPX70560.1 213 DHTGLVCDGLSLNNGKWDLDSTKFTYNTGATLATMALLLGFNDIIKGLPNIDKIHSYLENMASAAlntSGEMYDQSCKTNFKVWKDNTFFAQHLS 307
                     ******************************************7777777777777766555555565699************************* PP

                     HHHHHHH..SHHHH CS
  Glyco_hydro_76 286 rwlaltaqlapeta 299
                     + l+ ++  +p+++
      EPX70560.1 308 EGLMGFSFAMPNSS 321
                     ***99999999654 PP

>> GlcNAc_2-epim  N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0      0.43   2.6e+03      46     120 ..       8      87 ..       4      94 .. 0.49
   2 !   11.7   0.1   1.9e-05      0.11     227     309 ..     124     206 ..     112     216 .. 0.84
   3 ?    1.3   0.0     0.027   1.6e+02     303     325 ..     333     355 ..     308     373 .. 0.58

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.43
                    HHHHHHTTTTTB...-TTTSSB-SEEE.TTEEEE--EEHHHHHHHHHHHHHHHTTT-..TTHHHHHHHHHHHHHHHTEETT CS
  GlcNAc_2-epim  46 ehGlkflekvlr...daehggyfsalr.dggvldaskdaYdhaFvllalasalaage..eeakdlldetlavlekhlweek 120
                    + Gl++l++ ++   d+ ++   sa + +g   d   ++Y    v+  + + + +++  +++++  +++++ l++ +w+++
     EPX70560.1   8 DGGLNALQRCYKsffDKLSDKMGSAENvSGTYDDGGSHIYLVWSVAVYAEAMADSLKftNKYEKKFENVFQCLKR-YWSPE 87 
                    566666666666666666666665555234445566666666544432222222222112334444555555544.36665 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 1.9e-05
                    TT----THHHHHHHHHHHHHHHHBS-SSSSB-S-B-TTS-BSS--EEHHHHHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHH CS
  GlcNAc_2-epim 227 kreraakllekArkLfetalakgwdkdrgglvytldaagkpvddakllWpqtEalkaaaalaeltgearylewyarvaeyler 309
                    + +r++++l+ A+++++ ++++gw++++gg++  ++  + p  +     + + +l+a+ +++++  ++++++    +++ +++
     EPX70560.1 124 NSSRKKHYLDRAEAIIAFIINQGWNQQKGGVAWHVNSGSPPHANLNACSTAMCSLAALRLAYAVDDPKKKQQLVTFAWNCVQW 206
                    567889999************************99999988887777778888899999999998888888888888877765 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.027
                    HHHHHHHHTB-TTTSSB-SEE-T CS
  GlcNAc_2-epim 303 vaeylerhlidpekGlWfdklda 325
                     a+++++h++dp+ Gl f+ l+ 
     EPX70560.1 333 QADFVMNHVRDPKDGLYFRDLNI 355
                    34566666666666666666554 PP

>> NADase_NGA  Nicotine adenine dinucleotide glycohydrolase (NADase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.9    0.0001       0.6     190     255 ..      63     132 ..      55     149 .. 0.83
   2 ?   -1.7   0.0      0.17     1e+03     298     356 ..     308     369 ..     292     373 .. 0.75

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.0001
  NADase_NGA 190 vtfgnierdifekkfkeikdkwvtdkqa....defietadkyadkavqmsavasraeyyrmyvsrkyhyk 255
                 + f n     fe+ f+ +k  w  + +a      f    d y d   q++   + a yy    srk hy 
  EPX70560.1  63 LKFTNKYEKKFENVFQCLKRYWSPEYNAccasYYFQGNNDVYFDDNAQVAIALATAGYYTSNSSRKKHYL 132
                 567788888899999999****98877622213577889***********999***************95 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.17
  NADase_NGA 298 nglfvtsfaedmallf..tdqgklksadqien.ikdvdsgkysdgvyqyeydseltknidkl 356
                 +gl+  sfa   + l+  ++q  +  ad + n ++d   g y   +  y+   elt+  +k+
  EPX70560.1 308 EGLMGFSFAMPNSSLVksAQQMVFDQADFVMNhVRDPKDGLYFRDLNIYKISPELTNTFNKI 369
                 67777888865544431145566788998755489999999999999999999999998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (444 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       482  (0.0268838); expected 358.6 (0.02)
Passed bias filter:                      366  (0.0204139); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.69u 0.39s 00:00:01.08 Elapsed: 00:00:00.60
# Mc/sec: 2245.70
//
Query:       EPX70561.1  [L=661]
Description: hypothetical protein SOCG_04645 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (661 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1712  (0.0954878); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.84u 0.36s 00:00:01.20 Elapsed: 00:00:00.58
# Mc/sec: 3452.49
//
Query:       EPX70562.1  [L=807]
Description: transcription factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.3e-25   88.6   0.2    7.9e-25   87.4   0.2    1.6  1  Fungal_trans  Fungal specific transcription factor domain
    3.4e-09   36.7   5.4    6.7e-09   35.7   5.4    1.5  1  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.4   0.2   8.8e-29   7.9e-25       2     236 ..     285     497 ..     284     523 .. 0.86

  Alignments for each domain:
  == domain 1  score: 87.4 bits;  conditional E-value: 8.8e-29
  Fungal_trans   2 drffsnfhpqfpilhkpsflpkt...ssenssksayaspllllailalGalfsesetkesnssltsesqefiafplraeilihedfsspssslwilq 95 
                   + f  +++  f ++h+  + +      + ++++ +  +  l+ +i+alG++f++ e ++ ++ l +   +  +f+  a+ l+ ++   + +    +q
    EPX70562.1 285 KAFYRHVQANFFFYHETLLRYRLniiMNYQNPSVDPGFLSLVMMIFALGSQFAHLEVQSASTLLDN---PGKQFFDTARLLL-PQVIQQCK-PSLVQ 376
                   567777776675555544444447888889999999999999***************999888887...6777778888888.55555555.9**** PP

  Fungal_trans  96 sLlllelyektssdralherhhgvavrlarslgLhrnpsyvgkkslwklweeeaesrrRlwwaaFylDktialklGrppllddsqinlpLPcddddl 192
                     ll+ ly++ +  +++ + ++g+a++ a+  gLhr  ++         +++++e r Rlww+++ +D+++++ +Grp  + ds+ + +LP    +l
    EPX70562.1 377 VSLLIGLYLQSTLAQKSSYTYFGLALTAAVANGLHRSCENPD------IDPKTKELRNRLWWSVYTMDRLVSIATGRPLSIADSECDAALPTVVPEL 467
                   ****************************************99......*******************************99**************** PP

  Fungal_trans 193 wesddaseetlvetklsneeksrkiasfllaLkkilskiagsll 236
                   ++  +as+++++               +++++++i++k + +l+
    EPX70562.1 468 EIEGSASNVHNII--------------SMSKIAQIMGKTMEELY 497
                   ************9..............88888888888666665 PP

>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.7   5.4   7.5e-13   6.7e-09       2      36 ..      39      71 ..      38      75 .. 0.91

  Alignments for each domain:
  == domain 1  score: 35.7 bits;  conditional E-value: 7.5e-13
                S-HHHHHCT---STSSSS-HHHHHCTHHHCCCCTC CS
     Zn_clus  2 aCdnCrkkKvKCdakkPaCsnCkklnleCtfyses 36
                aC nC+ kK++C++++P C+ C+ ++l+C+ y+ +
  EPX70562.1 39 ACLNCKTKKIRCEGGNP-CKACALNGLQCV-YPMR 71
                9****************.************.8765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (807 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       660  (0.0368119); expected 358.6 (0.02)
Passed bias filter:                      510  (0.0284455); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.31s 00:00:00.97 Elapsed: 00:00:00.48
# Mc/sec: 5036.20
//
Query:       EPX70563.1  [L=349]
Description: RecA family ATPase Rhp55 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.8e-07   28.8   0.2    2.6e-05   23.6   0.2    2.4  1  Rad51      Rad51
    0.00012   21.7   0.0     0.0032   17.1   0.0    2.3  2  AAA_25     AAA domain
    0.00043   19.7   0.3      0.064   12.6   0.0    2.2  2  ATPase     KaiC
     0.0011   18.5   0.0     0.0018   17.8   0.0    1.3  1  RecA       recA bacterial DNA recombination protein
     0.0013   18.2   1.7       0.14   11.4   0.4    2.9  2  DnaB_C     DnaB-like helicase C terminal domain
     0.0049   16.6   0.0      0.012   15.3   0.0    1.7  1  IstB_IS21  IstB-like ATP binding protein


Domain annotation for each model (and alignments):
>> Rad51  Rad51
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   0.2   8.8e-09   2.6e-05      25     221 ..      31     276 ..      24     329 .. 0.82

  Alignments for each domain:
  == domain 1  score: 23.6 bits;  conditional E-value: 8.8e-09
                 HHHHHHTS.SEESSSEEEEEESTTSSHHHHHHHHHHHTTS-TTTS--SSEEEEEESSS---GGGGHHHH.....HHTT--HHHHGGGE.EEEE--STTH CS
       Rad51  25 klDelLgG.GietgsiteifGefrsGktqlchtlcvtvqlplelgGgegkavyidtegtfrperlveia.....erykldkeevlenv.ayaRaytieh 116
                  l+e  gG G++ g ++ei+G  + Gkt l+  l+  + l         k+++i+t   +  +rl ++         + d+ ++l++  +   +y + +
  EPX70563.1  31 LLNEAFGGtGLKRGFVSEICGAPGMGKTSLSLVLTANALLS------GTKVLWIETCHPIPLSRLRTMLqsqvpSSQEEDNFSTLDEYlQLLDVYYAPS 123
                 56666665599******************998888887776......5799*****9888888887766443334445555566665414567888888 PP

                 HHHHHH...HTHHHHHHS-EEEEEEETTTGGGCH-................................................---.---THHHHHHHH CS
       Rad51 117 qeellq...qaaallaedkfallivDsvtalyRtd................................................fsg.rgelakRqqklg 163
                  +++l    +  +  ++d ++l+i+D +                                                       fs+ + +l+kR++ +g
  EPX70563.1 124 LANILVylkTFDEDSNQDDIGLIIIDNLSMPIQLAfptcpddyaylrqrrstnsrktsmeslgkenldttlekevtskelidpFSNsQTNLNKRKRVVG 222
                 888876322556788999********9887777767788999*****************************************775278********** PP

                 HHHHHHHHHHHHH--EEEEEEE-------.------------HHHHHHHH-SEEEEEE CS
       Rad51 164 kllrtLrkladefevavvitnqvvaqvdgqaalfsadpkkPigGlvlahasttRlalr 221
                  + ++L++++  +++a+++t q++++v       ++ + +P +   + ++++ Rl+l 
  EPX70563.1 223 DISSMLSRISAAYQIAILVTTQMTSKVVS----GMGAKLIPFLSTNWLDKVSSRLVLY 276
                 ***********************999766....4677788888888888888888875 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   1.1e-06    0.0032      31     152 ..      42     152 ..      36     155 .. 0.73
   2 ?    2.0   0.0     0.044   1.3e+02     148     188 ..     204     244 ..     172     248 .. 0.87

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 1.1e-06
      AAA_25  31 pagelallaGapgtGKttlaldlalava.tGkpwlgpvapeqgkVlyvsaEdsedelrrRlravgeal...........rddarllvldlagveslpLf 117
                  +g ++ ++Gapg GKt l l l +  + +G            kVl++ ++ +      Rlr +++ +           ++d+ l++ld        ++
  EPX70563.1  42 KRGFVSEICGAPGMGKTSLSLVLTANALlSGT-----------KVLWIETCHPI--PLSRLRTMLQSQvpssqeednfsTLDEYLQLLD--------VY 119
                 6899999****************999995655...........89999999997..567888888777776655555555555555555........34 PP

      AAA_25 118 akdrggtlltadvdaleaaieevegvrlvviDpls 152
                 ++ +  ++    ++  +++ ++  +++l++iD+ls
  EPX70563.1 120 YAPSLANI-LVYLKTFDEDSNQ-DDIGLIIIDNLS 152
                 43333333.3345567899999.89*******997 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.044
      AAA_25 148 iDplsralggdensnsdvgalvealeriarrtgaavllvhH 188
                 iDp+s    + +++++ vg + ++l ri++++++a+l++ +
  EPX70563.1 204 IDPFSNSQTNLNKRKRVVGDISSMLSRISAAYQIAILVTTQ 244
                 899999888888888888******************99865 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   0.0   2.1e-05     0.064       8      54 ..      32      78 ..      29     111 .. 0.89
   2 !    5.0   0.3    0.0043        13      96     166 ..     174     246 ..     164     262 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 2.1e-05
      ATPase  8 lDeil.kgGipegrvvlitGepGtGKtifalqFlikgaekygepgvfv 54
                l e +   G+ +g v  i+G pG GKt ++l  + + + + g +++ +
  EPX70563.1 32 LNEAFgGTGLKRGFVSEICGAPGMGKTSLSLVLTANALLS-GTKVLWI 78
                566775679**********************999999999.9999988 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.0043
      ATPase  96 aeekdkedleel.ieelaeaikeikakrvviDsitgl.ayeekeavaReilrqlvrvlkklgvTailvsekss 166
                 +++++k+++e+l +e+l + +++   ++ +iD+ ++  ++ +k + +   +  ++++++  ++ ailv+ + +
  EPX70563.1 174 STNSRKTSMESLgKENLDTTLEKEVTSKELIDPFSNSqTNLNKRKRVVGDISSMLSRISAAYQIAILVTTQMT 246
                 344677888888557788888888889999******9888888888999999******999999999876433 PP

>> RecA  recA bacterial DNA recombination protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0     6e-07    0.0018      34      93 ..      25      84 ..      14      92 .. 0.91

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 6e-07
                E--S-HHHHHHTSSSSEETTSEEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEESS--- CS
        RecA 34 issGslaldialGiGGlpkGriieiyGpessGkttlalhaiaeaqkkggvaafidaehal 93
                +s  s  l+ a+G  Gl +G + ei G+   Gkt+l+l + a+a  +g  + +i++ h +
  EPX70563.1 25 FSFNSKLLNEAFGGTGLKRGFVSEICGAPGMGKTSLSLVLTANALLSGTKVLWIETCHPI 84
                56678899*******************************************999999865 PP

>> DnaB_C  DnaB-like helicase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.4   4.8e-05      0.14      14      51 ..      39      75 ..      24     159 .. 0.80
   2 !    3.9   0.0    0.0095        28     146     182 ..     213     249 ..     202     262 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 4.8e-05
                TSBXTTXEEEEEEXTTSSHHHHHHHHHHHHHHCSTSEE CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      DnaB_C 14 sGlqkgdliiiAarpsmGktalalniaenaavkeklpv 51
                +Gl++g +  i + p+mGkt+l l + +na  +  ++v
  EPX70563.1 39 TGLKRGFVSEICGAPGMGKTSLSLVLTANALLSG-TKV 75
                5899999999****************99988743.344 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.0095
                 SSSCCCHHHHHHHHHHHHHHHHCTSXEEEEEEXSGGG CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      DnaB_C 146 ekenreqevseisrsLkalakelnvpvialsqLsrav 182
                 + ++r++ v +is  L  ++   ++ +++  q+  +v
  EPX70563.1 213 NLNKRKRVVGDISSMLSRISAAYQIAILVTTQMTSKV 249
                 24578889************************98877 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   4.1e-06     0.012      52      83 ..      49      80 ..      27     103 .. 0.92

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 4.1e-06
   IstB_IS21 52 llGpsGvGKshlaialgveavraglsvlfvrv 83
                ++G +G+GK+ l+  l  +a  +g++vl++ +
  EPX70563.1 49 ICGAPGMGKTSLSLVLTANALLSGTKVLWIET 80
                8****************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (349 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       522  (0.0291148); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 2325.26
//
Query:       EPX70564.1  [L=379]
Description: protein kinase inhibitor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   1.6e-104  349.1   0.1     2e-104  348.8   0.1    1.1  1  Pil1       Eisosome component PIL1
  ------ inclusion threshold ------
      0.092   12.1   0.0       0.15   11.4   0.0    1.2  1  Gtr1_RagA  Gtr1/RagA G protein conserved region


Domain annotation for each model (and alignments):
>> Pil1  Eisosome component PIL1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  348.8   0.1  2.3e-108    2e-104       3     263 ..       6     262 ..       4     264 .. 0.96

  Alignments for each domain:
  == domain 1  score: 348.8 bits;  conditional E-value: 2.3e-108
        Pil1   3 raysirsskastasesqteaspksstkskrlfslkslrsslrkqaaasfsPelarrLakLikseknlvraheaaarerksiakqlseWGedtdddvsDv 101
                 r+  i++ + +  s++  ++ p+s+t++  +f+  ++++++r++++++f+Pe+a+rLa L+k+ek+l+r++e+ a+erks+a+qls+WGed+ddd+sD+
  EPX70564.1   6 RSQTIHTLRGPPPSQQ--RQVPRSTTRR--NFKPPRMGTQVRTNHIGMFTPEMAKRLAVLVKMEKSLLRTYEVLADERKSCANQLSYWGEDCDDDISDI 100
                 6778888888888864..4555577666..9******************************************************************** PP

        Pil1 102 sDklgvllselgeledayadrldqsRatlKsirniEasvqpsRdkkekladeiaklkakepqserlvvlEqeLvraeaeslvaeaqlsnitReklkeay 200
                 sDk+gvll+++ge+ed+++d++dq+R++lKsirniEa+vqp+R++kek+ + i+++++++p+s++l+ lEq+Lvr+ea++lvaeaql+nitRe++k a+
  EPX70564.1 101 SDKIGVLLYQIGEQEDQMIDKHDQYRISLKSIRNIEANVQPARERKEKILNAIYEIRQRDPDSPKLIALEQQLVREEAACLVAEAQLTNITRENFKLAM 199
                 *************************************************************************************************** PP

        Pil1 201 taefdaliEraeKlallarygkrLlellddspvtpGetrpaYdgaeatrqiladaedaLrewr 263
                 t+++ +l E++eK+ +l++y+kr+l+lldd+p+tpGe rp+Ydg++ t++++ +ae+++++w+
  EPX70564.1 200 TINIGTLLEHSEKVSVLCGYAKRILDLLDDTPITPGEPRPIYDGYDITKDYVLEAEREISNWQ 262
                 **************************************************************8 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   1.7e-05      0.15      25     112 ..      52     139 ..      48     141 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 1.7e-05
   Gtr1_RagA  25 ardtlrlgatidveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDvesreleedletlkeilealrqyspea 112
                 ++ + rl++ +++eks +r+++ l  +   c  q ++  e +  + ++i  ++gvl+y +  +++++ +++++++ +l+ +r+++ ++
  EPX70564.1  52 PEMAKRLAVLVKMEKSLLRTYEVLADERKSCANQLSYWGEDCDDDISDISDKIGVLLYQIGEQEDQMIDKHDQYRISLKSIRNIEANV 139
                 666789999999***************************************************999***************9998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (379 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       619  (0.0345251); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2745.08
//
Query:       EPX70565.1  [L=557]
Description: inositol polyphosphate phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.1e-57  193.9   1.6    7.1e-57  193.1   1.6    1.3  1  Syja_N    SacI homology domain


Domain annotation for each model (and alignments):
>> Syja_N  SacI homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  193.1   1.6   3.9e-61   7.1e-57       3     275 ..      52     309 ..      50     310 .. 0.87

  Alignments for each domain:
  == domain 1  score: 193.1 bits;  conditional E-value: 3.9e-61
      Syja_N   3 ilGlirllsgsyllvitkreevgtlkgkkeiykitevellplsseeeaekalkslkaktekkkeekeleekllklleklfessgsfYFsydlDltrslq 101
                 ++G+irl+  +y++++tk+e+  t+ g+ +i++ +++ ++p+++ ++a  + +           ++e+e+ +l ll++ +  +g++ Fs ++Dlt+slq
  EPX70565.1  52 LYGIIRLKLFKYMILVTKCEHNSTFLGN-NIFRAKNFVIIPITRVNSAPIEPEM---------VQDEEERYYLYLLKRHL-YHGQILFSPSMDLTNSLQ 139
                 68******88************997676.9************877555555554.........34444778998996666.799*************** PP

      Syja_N 102 rqlekssesskslplweraderFvWNrhllkpli.....eaeldswllpviqGfveqsklklsksqkekekkevtltlisRrsrkraGtRylrRGidde 195
                 r+++ ss s+k+     +a+ rF+WN++  ++l+     ++++ +++ p+iqG +++++l +++       ++v+l +i+R  + + GtRy++RG+d++
  EPX70565.1 140 RSHKVSSGSNKRF----TANFRFFWNKYTNEELLslaidNDQFLEYIQPMIQGNISSTSLFVKT-------HHVQLYIITRHATDHSGTRYFSRGVDEN 227
                 ****987777777....8999***********77677766699************777766544.......78************************** PP

      Syja_N 196 GnvANfvEtEqileves..sekeskilSfvqiRGSiPlfWsqeptlkykpkirierseeenleafkkHfekllkrYg.kvvvv 275
                 G+vANf EtEq+l+v s   ++es +lS++qiRGSiP+fW ++++l+y p++ ++  +  + +af++Hfe+l ++Y+ +++vv
  EPX70565.1 228 GKVANFNETEQVLLVDSslVPEESILLSYTQIRGSIPMFWAEINDLRYLPRLVVQ-PTTYSEAAFERHFEDLASDYQnEIIVV 309
                 **************66668888899*****************************7.6667889*************9667666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (557 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       377  (0.0210274); expected 358.6 (0.02)
Passed bias filter:                      290  (0.0161749); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3921.65
//
Query:       EPX70566.1  [L=408]
Description: fructose-2,6-bisphosphate 2-phosphatase activity [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-38  132.4   1.5    2.9e-38  131.4   1.5    1.4  1  6PF2K       6-phosphofructo-2-kinase
    7.3e-30  104.1   0.0    1.2e-29  103.4   0.0    1.3  1  His_Phos_1  Histidine phosphatase superfamily (branch 1)
    9.5e-05   22.0   0.1    0.00015   21.3   0.1    1.3  1  KTI12       Chromatin associated protein KTI12
     0.0047   17.1   0.0     0.0076   16.4   0.0    1.4  1  AAA_33      AAA domain
  ------ inclusion threshold ------
      0.032   13.3   0.1       0.76    8.8   0.0    2.3  2  DUF2048     Abhydrolase domain containing 18


Domain annotation for each model (and alignments):
>> 6PF2K  6-phosphofructo-2-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.4   1.5     8e-42   2.9e-38      14     222 ..      10     206 ..       5     207 .. 0.91

  Alignments for each domain:
  == domain 1  score: 131.4 bits;  conditional E-value: 8e-42
                 EEEEEESSTTSSHHHHHHHHHHHHHHTT--EEEEEHHHHHHHHHSS---GGGGSTT-HHHHHHHHHHHHHHHHHHHHHHHTS--SEEEEES---SHHHH CS
       6PF2K  14 lvivlvGLpargKtyiskkltrylkwlgvrtkvFnvgkyrreaskalsdaeffrpdneealklreklalaalkdllaylneeegqvaifDAtNttrerR 112
                 l++ ++GLpa gKt+ + kl+ry +w++v+t v+    y +   +++++++f  p         e++    ++dl a+ + ++g+v i D     +e R
  EPX70566.1  10 LCVCFLGLPASGKTFSAGKLSRYFSWMSVKTEVYSSETYLE---TEYENSDFTVPRH-----TVEQVN-LIFNDLEAFYK-NGGHVTILDFNECHKELR 98 
                 78999*****************************9888865...4566677777654.....345554.4689*999887.89**************** PP

                 HHHHHHHHHTT-EEEEEEEE--HHHHHHHHHHHHTTTSGGGTTS-HHHHHHHHHHHHHHHHTT-----TTTTTTSEEEEEETTTTEEEEE---SHHHHH CS
       6PF2K 113 klilefveennlkvlflesicsdeeiikeNikevklsspDYkdketeeaikdflkRlenyekqyeplddeedeelsyIkvidvgkslvvnnvqgylqsr 211
                 + i++ +e++n+ ++f+e +c+d+++i+eNi+++ ++sp Yk  + + a +   + ++ y++ y pl+  e e+ +++++id  ++++v+n+++y qsr
  EPX70566.1  99 RSIVNAAEKRNILIMFVEIVCTDQKFIEENITDICTNSPSYKHIPLDVAKEKLREVIKSYRQDYAPLT--EAEDCTFVRIIDFCNEVIVHNIKNYWQSR 195
                 ********************************************************************..88899************************ PP

                 HHHHHTT---S CS
       6PF2K 212 ivyyllNihlk 222
                 ivyyl N++ k
  EPX70566.1 196 IVYYLSNLRIK 206
                 *******9865 PP

>> His_Phos_1  Histidine phosphatase superfamily (branch 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.4   0.0   3.3e-33   1.2e-29       1     182 [.     210     386 ..     210     396 .. 0.92

  Alignments for each domain:
  == domain 1  score: 103.4 bits;  conditional E-value: 3.3e-33
                 EEEEE---BTTB--....TT----B-HHHHHHHHHHHHHHTTS---EE....EE-SSHHHHHHHHHHHHCTT--EEE-GGGS----GGGTT-B.HHHHH CS
  His_Phos_1   1 lyLvRHGetewnaegrlqgrtdvpLteeGreqAealaerlagepidai....ysSplkRarqTaeliaealglpveldegLrEidfGdweglttaeiae 95 
                 ++L RHGe+e n++gr++g  ++ L+ +G++ A  l e++++  i       ++S +kR++qTa ++      +  ++++L+E+d G ++g t++ i+e
  EPX70566.1 210 IWLSRHGESEFNVQGRIGG--NSGLSTQGEKYASLLPEYVSKFVIGSKgltvWTSSMKRTIQTASHLD----YQKLEWKALDELDAGIFDGFTYDYIEE 302
                 89*************9987..689*****************95555545567************8765....68899********************** PP

                 H..HSHHHHHHHHH-GGG-BS-BHHHHHHHHHHHHHHHHHHTTTSEEEEEE-HHHHHHHHHHHHT--GGGGGGB---TT-EEEEEE- CS
  His_Phos_1  96 eypeeleawlrdpadvrppggEsledvaaRvaaaleelaarhegetvlvVsHggvirallarllglpleelrrleldnaslsvlefd 182
                 +yp+e ++++ d+ ++r+ ggEs+ dv++R+++++ el+++ +   v +++H++++r+++ ++ +++leel+ l+++ +++ +l+ +
  EPX70566.1 303 KYPHEAQKRSYDKFHYRYRGGESYMDVVRRLEPIIMELERQGD---VFIICHQAILRCIYGYYHNFSLEELPFLNVPLHTILKLTPT 386
                 **************************************99986...**************************999999999888765 PP

>> KTI12  Chromatin associated protein KTI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.1   4.1e-08   0.00015       4     117 ..      12     131 ..      10     195 .. 0.76

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 4.1e-08
                 EEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH....TTSSS--GGGHHHHHHHHHHHHHHHHTT..SEEEE-S---SHHHHHHHHHHHHHTT- CS
       KTI12   4 vvltGlPssGKstrakeLakaleeekrsvvviddeslg...iekdsykdsakekalRsslrsavkrdLsk.ekvVIvDslnyikgfRYeLyciakaakt 98 
                 v + GlP+sGK+  a +L+++++    +  v ++e++     e+++++  ++  +  + ++++ +   ++  +v+I+D     k  R+ + ++a + ++
  EPX70566.1  12 VCFLGLPASGKTFSAGKLSRYFSWMSVKTEVYSSETYLeteYENSDFTVPRHTVEQVNLIFNDLEAFYKNgGHVTILDFNECHKELRRSIVNAAEKRNI 110
                 6799********************************994333334444333333333444444444443325899************************ PP

                 EEEEEEEE--HHHHHHHH..H CS
       KTI12  99 tlcvvyvvapldvlvkwn..e 117
                   + v +v++ ++ ++ n  +
  EPX70566.1 111 LIMFVEIVCTDQKFIEENitD 131
                 **********99998888443 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   2.1e-06    0.0076       2     115 ..      12     129 ..      11     165 .. 0.70

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 2.1e-06
      AAA_33   2 vllvGlpGsGKstlaerllkklg.....avllssdtlrrrlfgtdqqsktdytrvldrlyqilnelarkalsagrn.vildatnlsrrerarflklarr 94 
                 v + Glp+sGK++ a +l +        +++ ss t++++ ++  + + t + +  ++++ i n+l +   + g++ +ild   + ++ r+ ++++a++
  EPX70566.1  12 VCFLGLPASGKTFSAGKLSRYFSwmsvkTEVYSSETYLETEYE--NSDFTVPRHTVEQVNLIFNDLEAF-YKNGGHvTILDFNECHKELRRSIVNAAEK 107
                 6799**************9888855555666666666663332..233344455666777777666654.45555549********************9 PP

      AAA_33  95 lgvpvrivv.vetdeetlkeRl 115
                  +  +  v  v td++ ++e++
  EPX70566.1 108 RNILIMFVEiVCTDQKFIEENI 129
                 9977766541455666666665 PP

>> DUF2048  Abhydrolase domain containing 18
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0     0.021        74     203     242 ..      11      51 ..       8      57 .. 0.91
   2 ?    8.8   0.0   0.00021      0.76     303     351 ..      56     106 ..      53     107 .. 0.83

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.021
     DUF2048 203 lvpclswstasavfteGvlsksiawdvLekq.ledgnyrer 242
                  v++l   +   +f+ G ls+  +w   +++ ++ ++y e+
  EPX70566.1  11 CVCFLGLPASGKTFSAGKLSRYFSWMSVKTEvYSSETYLET 51 
                 59999999999********************9999999886 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00021
     DUF2048 303 dDayvpresvaslqeiwpgsevryldgGHvsay..llkkklfrkaiveale 351
                 +D  vpr++v++++ i+ + e  y +gGHv+       +k +r++iv+a e
  EPX70566.1  56 SDFTVPRHTVEQVNLIFNDLEAFYKNGGHVTILdfNECHKELRRSIVNAAE 106
                 67789*************************975213457889999998866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (408 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       758  (0.0422779); expected 358.6 (0.02)
Passed bias filter:                      548  (0.030565); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 2894.04
//
Query:       EPX70567.1  [L=162]
Description: V-type ATPase V0 proteolipid subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-32  111.8  31.0      7e-19   67.9   9.5    2.1  2  ATP-synt_C  ATP synthase subunit C


Domain annotation for each model (and alignments):
>> ATP-synt_C  ATP synthase subunit C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.1  13.5   1.5e-17   2.6e-13       2      60 .]      17      75 ..      16      75 .. 0.98
   2 !   67.9   9.5   3.9e-23     7e-19       1      60 []      94     153 ..      94     153 .. 0.98

  Alignments for each domain:
  == domain 1  score: 50.1 bits;  conditional E-value: 1.5e-17
                HHHHHH.GGGHHHHHHHHHHHHHHHHHHHHSGHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  ATP-synt_C  2 gaglavGlsalgsGigiGkagsagiravarnpklftksliilafaeaialygLivalil 60
                g++ ++++s+lg+G+g++ ag +++   a +p++ +ksli+++++++i++ygL++++++
  EPX70567.1 17 GVCASMVFSCLGAGYGTALAGRGIAAVGAFRPEIVMKSLIPVVMSGIIGVYGLVMSVLI 75
                8999****************************************************997 PP

  == domain 2  score: 67.9 bits;  conditional E-value: 3.9e-23
                 HHHHHHH.GGGHHHHHHHHHHHHHHHHHHHHSGHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  ATP-synt_C   1 lgaglavGlsalgsGigiGkagsagiravarnpklftksliilafaeaialygLivalil 60 
                 l aglavGl+++++G++iG++g++g+++  r+ ++f+ +++il+fae+++lygLiv+lil
  EPX70567.1  94 LSAGLAVGLTGVAAGYAIGIVGDKGVQSFMRQDRIFVSMVLILIFAEVLGLYGLIVGLIL 153
                 68********************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       643  (0.0358637); expected 358.6 (0.02)
Passed bias filter:                      289  (0.0161191); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.42
# Mc/sec: 1168.37
//
Query:       EPX70568.1  [L=1005]
Description: sporulation protein Spo3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1005 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       623  (0.0347482); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.74u 0.27s 00:00:01.01 Elapsed: 00:00:00.46
# Mc/sec: 6503.76
//
Query:       EPX70569.1  [L=395]
Description: battenin CLN3 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   6.3e-114  381.1  28.2   7.8e-112  374.2  28.2    2.0  1  CLN3      CLN3 protein


Domain annotation for each model (and alignments):
>> CLN3  CLN3 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  374.2  28.2  4.3e-116  7.8e-112       3     397 ..      16     382 ..      14     383 .. 0.93

  Alignments for each domain:
  == domain 1  score: 374.2 bits;  conditional E-value: 4.3e-116
        CLN3   3 FwllGLiNNvlyvviLsAAlDlvgkstpkgvvlladilPsllikllapffi.hkvpysvrvlllvllsalgmllvalskslavkllGvvlaslssGlGE 100
                 F l+GL+NN+lyvviLsAAlDlvg +++kgvvll++i+Psl +kll++ +  h+ + s+rvl++v+ls++gm ++a+s+s++ k+lGv la++ss++GE
  EPX70569.1  16 FLLFGLLNNLLYVVILSAALDLVGANISKGVVLLSNIVPSLSCKLLTSILQaHRYSASKRVLACVFLSFFGMQWIAWSSSVWSKMLGVSLAAISSSFGE 114
                 99*********************************************99877999999***************************************** PP

        CLN3 101 ltfLqlthyykksslaawssGTGaaGlvGallyalltsllglsvkatllvslvlPlllllsyflllekkkskkeakaeeeeeeyekleeeeeeeeeese 199
                 +tfLql+++y++++l+ wssGTG aGl+Ga +y+++t++l+++v++tllvs++lPlll++ yf++l+k++ ++ +  +  +   +++            
  EPX70569.1 115 ITFLQLSSRYESTALTCWSSGTGLAGLFGASFYLVFTTWLNFTVRTTLLVSSFLPLLLIFNYFCILPKPEYQHISVPH--RVPFDAI------------ 199
                 *******************************************************************99865543322..2222222............ PP

        CLN3 200 eeelleseaasaaeeeeeeesselkkslkeklklvksLllkymlPLllVYlaeYliNqgvaptllfpleekpfkslrdqYrvyqvlYqlgvfisRssvs 298
                              ++  +++s+++ +s+k  + l+k++ll +mlPL+lVYl+eY+iN gvaptllfp e++ ++s+rd+Y++yq++YqlgvfisRss+ 
  EPX70569.1 200 -------------HQGGTSSSKNVFSSIKVFFYLAKPFLLSHMLPLFLVYLSEYTINVGVAPTLLFPPEDSGLNSFRDFYPTYQTMYQLGVFISRSSIG 285
                 .............22223344567788999**************************************9****************************** PP

        CLN3 299 llrirklyllsllQvlnlvllllealyelflpsiylvfllilyeGllGGaaYvntfaeiseevekeerefslgavsvsDslGillagllalplenalCk 397
                 +l++  +  l+++Q ++l +++l++ly +f++s+ +++l i++eGl+GG++Yvn+++++++   + + e ++++vs sDs+Gil+a+ll+l le++lC 
  EPX70569.1 286 WLKVPYVLELAVIQSAILGFTILQSLY-YFIHSYHFLLLTIFIEGLIGGTVYVNVYHTLQN-LGHIDSEMAISIVSPSDSTGILIASLLSLILEPSLCG 382
                 ***************************.55**************************99876.788999******************************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (395 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       579  (0.032294); expected 358.6 (0.02)
Passed bias filter:                      260  (0.0145016); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.29s 00:00:00.82 Elapsed: 00:00:00.47
# Mc/sec: 2552.93
//
Query:       EPX70570.1  [L=557]
Description: DUF726 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.3e-125  418.9   0.5   1.7e-125  418.5   0.5    1.1  1  DUF726    Protein of unknown function (DUF726)
  ------ inclusion threshold ------
      0.022   14.0   0.0      0.038   13.2   0.0    1.4  1  LCAT      Lecithin:cholesterol acyltransferase


Domain annotation for each model (and alignments):
>> DUF726  Protein of unknown function (DUF726)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  418.5   0.5  1.9e-129  1.7e-125       2     339 ..     168     509 ..     167     512 .. 0.97

  Alignments for each domain:
  == domain 1  score: 418.5 bits;  conditional E-value: 1.9e-129
      DUF726   2 kikrylliglAglaGgaligltggLaaPlvaagigallaglGltgsaa..fLasvggsa.vitallgaagAklsvkkmkkrvkeikdFefiplseqirl 97 
                 k+++++++glAg+aGgalig+tggLaaPlva+g+g l+aglGl++  +  +L+++  sa +it+l+g +gAk+s++++++ +  i dFefipl+++++l
  EPX70570.1 168 KVRKRITMGLAGIAGGALIGVTGGLAAPLVASGLGVLFAGLGLGTMIGasYLGTLITSApMITTLFGGFGAKMSINQVHEISRGISDFEFIPLEASSNL 266
                 89999************************************997665577*****99999*************************************98 PP

      DUF726  98 ksltvtvsislelsdeddvtapwralakae.....kdlYalkwEvelLkelGkaletilasealsvakqeilkrtvlaslvaaltWPlaLlkvakildn 191
                  s+t++v+++l  ++ +d   +w  l+  +     +d Yalk+Ev++ ++lGk +++il+++ ls++++e++krt+la+l+aal WPl+Ll++++il+n
  EPX70570.1 267 -SMTIGVAGWL--ESPQDAADTWYPLTFGDksyywGDFYALKFEVQAFVDLGKVISRILFTTSLSWVQDEVIKRTILAPLSAAL-WPLGLLRIGNILGN 361
                 .9999999998..77888899999998877778999************************************************.************** PP

      DUF726 192 pwnvsleraakaGklLAdallsraqGeRpvtLiGfslGARviyvCLlelakkkalglvenvillGaPvtteakvwlkvrsvvsgRlvnvysenDylLgf 290
                 +w+v+++ + kaG++LA+ l+ raqG+RpvtLiGfslG R+i++CLl+la++ ++g+venvi++G+P+ t++k w k+rsvvsgRlvnvys+nDy+L++
  EPX70570.1 362 SWRVVFNLSIKAGEALANGLCMRAQGKRPVTLIGFSLGSRTIFECLLKLAERYEIGIVENVIIMGTPASTDPKLWKKMRSVVSGRLVNVYSKNDYVLQL 460
                 *************************************************************************************************** PP

      DUF726 291 lyRtssaqfrvaglqrieldvekvenvdvselvegHldYrkklkkilka 339
                 +y+t+s+q r++gl++i+l+++ venvdv++l+egHl+Yr++l+kilk+
  EPX70570.1 461 VYKTNSIQTRATGLEPIALNSSCVENVDVGDLIEGHLQYRWLLPKILKE 509
                 ***********************************************96 PP

>> LCAT  Lecithin:cholesterol acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   4.2e-06     0.038     117     190 ..     385     460 ..     381     549 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 4.2e-06
        LCAT 117 klsgkkvvliaHSmGnllvlyflkwveaeaWvdqhikafislgapllGsvk...avkallsGenkgipvlseltlrv 190
                 ++++++v li+ S+G+  +++ l+++ ae +    ++  i +g+p    +k    +++++sG   ++   ++  l++
  EPX70570.1 385 AQGKRPVTLIGFSLGSRTIFECLLKL-AERYEIGIVENVIIMGTPASTDPKlwkKMRSVVSGRLVNVYSKNDYVLQL 460
                 477899******************95.55558899***********9999722256677777776665544444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (557 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       538  (0.0300073); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.42
# Mc/sec: 3965.09
//
Query:       EPX70571.1  [L=140]
Description: hypothetical protein SOCG_04385 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       601  (0.0335211); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.29s 00:00:00.68 Elapsed: 00:00:00.43
# Mc/sec: 978.36
//
Query:       EPX70572.1  [L=406]
Description: 19S proteasome regulatory subunit Rpn9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.7e-12   45.9   3.0    1.4e-11   44.8   0.1    2.8  3  PCI       PCI domain
  ------ inclusion threshold ------
      0.012   15.1   0.1      0.036   13.6   0.1    1.9  1  Rpn9_C    Rpn9 C-terminal helix


Domain annotation for each model (and alignments):
>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1      0.39   3.5e+03      17      47 ..      44      73 ..      35      78 .. 0.66
   2 ?   -0.1   0.0      0.14   1.3e+03       7      33 ..     110     140 ..      79     195 .. 0.63
   3 !   44.8   0.1   1.5e-15   1.4e-11       2     104 ..     262     364 ..     261     365 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.39
                HHHHHHHHHHHHHHHHTTHHH..HHHHHHHHHH CS
         PCI 17 gfseelkdleeelladdglaq..llesLekkvr 47
                +++e  +++   +++ ++l++  l+++L +k++
  EPX70572.1 44 RAPEQFQEY---YFIMEDLYErkLWKQLTDKLI 73
                455555666...455555555558888888876 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.14
                 HHHHHHTSHHHHHHHHHHH....HHHHHHHT CS
         PCI   7 lkalrsgnlsgfseelkdl....eeelladd 33 
                 lka++s++ +++ ++l +l     ee ++d 
  EPX70572.1 110 LKAFESCSNEEAFRNLTQLiegiDEEKFKDA 140
                 5555666656666666655555533333333 PP

  == domain 3  score: 44.8 bits;  conditional E-value: 1.5e-15
                 HHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH....CESEEEHHHHHHHHTSSHHHHHHHHHHHHHTTSSSEEEET CS
         PCI   2 sysdllkalrsgnlsgfseelkdleeelladdglaqllesLekkvrerllrqvsk....iyssislerlaklldlsvdevEkilvklIrdgeirakidq 96 
                 +++dl+ a++ g+l++++++++       + + l+  ++ L +kvr+++l+++++     +++++++++ak+  ++++evE +++++ + g+i + idq
  EPX70572.1 262 WLHDLVVAMNVGDLAKYERLMAHI----NKIPLLQSSVSLLGQKVRLMALIELVFqlppNQRTLTFHTIAKATRIPSHEVELLIMRALSVGLITGLIDQ 356
                 7899******************99....78889999*************************************************************** PP

                 TTTEEEEC CS
         PCI  97 esgivvfk 104
                 +++iv+++
  EPX70572.1 357 VAQIVNIS 364
                 *****986 PP

>> Rpn9_C  Rpn9 C-terminal helix
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   4.1e-06     0.036       1      30 []     370     399 ..     370     399 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 4.1e-06
                 -SSHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      Rpn9_C   1 IINeeQInkMKdrLVeWdeqVtkLGkkieA 30 
                 I N  Q+  M  rL +W++++ +L   +eA
  EPX70572.1 370 ILNHSQVASMETRLRDWNQNIHSLNNIVEA 399
                 88********************99776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (406 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       909  (0.0507); expected 358.6 (0.02)
Passed bias filter:                      578  (0.0322383); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.29s 00:00:00.84 Elapsed: 00:00:00.47
# Mc/sec: 2623.03
//
Query:       EPX70573.1  [L=611]
Description: metallopeptidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   4.3e-140  467.1   0.0   5.6e-140  466.7   0.0    1.1  1  Metallopep     Putative peptidase family
  ------ inclusion threshold ------
      0.022   14.7   0.3       0.62   10.0   0.2    2.6  2  Jacalin        Jacalin-like lectin domain
      0.027   14.6   0.0      0.063   13.4   0.0    1.6  1  Reprolysin_5   Metallo-peptidase family M12
      0.084   12.7   0.0       0.17   11.8   0.0    1.4  1  Peptidase_M10  Matrixin


Domain annotation for each model (and alignments):
>> Metallopep  Putative peptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  466.7   0.0  1.3e-143  5.6e-140       1     427 []       3     402 ..       3     402 .. 0.96

  Alignments for each domain:
  == domain 1  score: 466.7 bits;  conditional E-value: 1.3e-143
  Metallopep   1 sievenlqdneevsqpvvlvkGkisekksekkkgkvkvehndksfppltwpvndseFKalvhLspgenrltvekesevasseltlnykpleqnppvhlv 99 
                 +i + n+q+ne+v++++v+v+G++ +++ ++++  v+v+h  + fp+++w v+ds+FKal+h+ pgen + + +++  ++  l+lny+ l++np++++ 
  EPX70573.1   3 QIILDNIQNNETVYHRFVIVHGRVTSNN-SHTSAFVTVKHFADTFPQQYWVVTDSYFKALIHVVPGENVVLF-QTDNGSELSLRLNYQVLNDNPFYRIG 99 
                 57899*******************9999.889999*****9999****************************.9999********************** PP

  Metallopep 100 ilvakdsdgtfdapeaklekeegndldaaikklrlaarLlQaftaeklrrkglgrrtFrleeevetdtlvq..esetlrsevkvhvlrsektvaelrdl 196
                 ++v++dsd+tfdap      + +ndld+ai+klr+aa+L+Qaftae ++r+g+grrtFrlee+++ dt+++     t r ++ +hvlrs+kt +e+r++
  EPX70573.1 100 FVVGRDSDLTFDAPY-----GMKNDLDEAIRKLRCAAYLWQAFTAECMYRNGFGRRTFRLEENIQPDTMSCqsAWGTERLTASIHVLRSDKTAEEIRST 193
                 *************98.....6789***********************************************6666799*****************7765 PP

  Metallopep 197 dlAQQnskakdedeLfqiaaealkksgepesdkkvkvavllldthydkkrklitgHaALGGggseikLaiFGshglyswPssleevvpafldatrvdta 295
                             d+Lf++a +a++k g p   +++++++++ldt+yd+++k ++gH ALGGg++++kL++FGsh+l+s+Ps +e v+p+f+da+r+  +
  EPX70573.1 194 ----------PPDQLFHVAGNAVDKLGLP---EPWHYICMFLDTRYDPSSKEVRGHVALGGGTDMHKLGVFGSHSLHSFPSAIEYVIPVFSDARRIP-D 278
                 ..........9***************987...799**************************************************************.* PP

  Metallopep 296 evanDsnergtywealaitlGAflHEiGHllglpHqedGvmlrdydalnrsfttreaeskrtkskgkrkvlpkeectwsrldalrfryhpsfalpgdts 394
                 ++anD+ne++t we+++i++GA+lHE+GH+lg+pHq+dG+mlr+y  +nrsfttre e+ rt skg +++lpk+ec+w+ ld+lrf yhp f+lp+d +
  EPX70573.1 279 YLANDANESSTVWECANIGIGAILHELGHTLGCPHQPDGIMLRSYPIFNRSFTTRESECVRTGSKGLAPILPKDECSWHYLDLLRFYYHPLFRLPSD-Q 376
                 *************************************************************************************************.5 PP

  Metallopep 395 skpsdenkkklskpsvypveneevliksesgia 427
                 + psd        ++ y v ++++++++++gi+
  EPX70573.1 377 QYPSD-------VETSYYVSGDQIVFTNDTGIF 402
                 56665.......788888999999999998885 PP

>> Jacalin  Jacalin-like lectin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0     0.028   1.2e+02      92     128 ..     525     561 ..     484     566 .. 0.83
   2 ?   10.0   0.2   0.00014      0.62      88     129 ..     565     608 ..     557     611 .] 0.75

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.028
                 EEEEEC.--SEEEEEE-SSEEEEEEEEEESSSEEEEE CS
     Jacalin  92 tselfgtksgtkfsleekgkkivGFhGragnllnalG 128
                  s l g+++g+   +  +g++i GF  r+g +++ + 
  EPX70573.1 525 NSALLGNRGGSPHDFDTDGSNIAGFLIRSGAWVDGIS 561
                 46677888999999999*************9999885 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00014
                 TTS-EEEEEC.--SEEEEEE-..SSEEEEEEEEEESSSEEEEEE CS
     Jacalin  88 nkgrtselfgtksgtkfslee..kgkkivGFhGragnllnalGv 129
                   g+ts++fg+ +g   +l +  +++++vGF+G+ +  ++++G+
  EPX70573.1 565 ENGNTSPFFGNANGGGQKLYKipENSRLVGFYGTLAGFMDSVGF 608
                 6788******5555444444446*************99999997 PP

>> Reprolysin_5  Metallo-peptidase family M12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   1.4e-05     0.063     143     162 ..     298     317 ..     277     346 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1.4e-05
  Reprolysin_5 143 vqvvaHElGHnfGavHDcds 162
                   + ++ HElGH++G++H +d+
    EPX70573.1 298 IGAILHELGHTLGCPHQPDG 317
                   56789***********9886 PP

>> Peptidase_M10  Matrixin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   3.7e-05      0.17     114     142 ..     302     329 ..     286     338 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.7e-05
                    HHHHHHHTTBESXSSTTSTTSSSCT.XTTT CS
                    xxxxxxxxxxxxxxxxxxxxxxxxx.xxxx RF
  Peptidase_M10 114 aHEiGHalGLeHssdkdalmyplyk.eekk 142
                    +HE+GH+lG  H  ++d +m   y   +++
     EPX70573.1 302 LHELGHTLGCPH--QPDGIMLRSYPiFNRS 329
                    7***********..9999**9999765555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (611 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       389  (0.0216967); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.29s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 4073.90
//
Query:       EPX70574.1  [L=125]
Description: U3 snoRNP-associated protein Snu13 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.8e-26   90.7   0.0    4.6e-26   90.4   0.0    1.1  1  Ribosomal_L7Ae  Ribosomal protein L7Ae/L30e/S12e/Gadd45 famil
     0.0023   18.0   0.0     0.0024   18.0   0.0    1.1  1  RNase_P_pop3    RNase P subunit Pop3
     0.0067   16.3   0.0     0.0089   15.9   0.0    1.2  1  PELOTA_1        PELOTA RNA binding domain


Domain annotation for each model (and alignments):
>> Ribosomal_L7Ae  Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.4   0.0   7.7e-30   4.6e-26       2      92 ..      18     108 ..      17     110 .. 0.95

  Alignments for each domain:
  == domain 1  score: 90.4 bits;  conditional E-value: 7.7e-30
                     HHHHHHHHHHHHTEEEESHHHHHHHHHTTTESEEEEETTSSSGGHHHHHHHHHHHTTEEEEEESCHHHHHHHTTSSSECSEEEEEESTTTH CS
  Ribosomal_L7Ae   2 aieevlkkakkagklvlGlkevtkalergeaklvilAedvepeekkkllealckekevpyvkvkskkeLGelvgkkrpvsalaikdegdsk 92 
                     +i +++++ ++ ++l++G++e+tk+l+rg  +++++A+d+ep+e+  +l+ lc++k+vpyv+v+sk++LG+++g +rpv++++i+++++s+
      EPX70574.1  18 QILDLVQQGSHYKQLRKGANEATKTLNRGISEFIVMAADTEPIEILLHLPLLCEDKNVPYVFVPSKAALGRACGVSRPVISASITTNEASD 108
                     567788888999***************************************************************************9886 PP

>> RNase_P_pop3  RNase P subunit Pop3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0     4e-07    0.0024      32     112 ..       9      84 ..       2     123 .. 0.77

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 4e-07
  RNase_P_pop3  32 eLlqekvlkklvrlleskeneeseltvglneivelLecsesddvvllvcnkDtPsvLlsqlpllvavanltvklvqlpksa 112
                    L ++ + ++++ l + ++ + ++l  g ne  + L+  +  + ++++ + + P  +l +lpll++ +n  v+ v +p +a
    EPX70574.1   9 PLADTGLTQQILDLVQ-QGSHYKQLRKGANEATKTLN-RGISEFIVMAADTE-PIEILLHLPLLCEDKN--VPYVFVPSKA 84 
                   5777888888888888.8999999************9.66666555555555.****************..8888777654 PP

>> PELOTA_1  PELOTA RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   1.5e-06    0.0089      23      71 ..      33      83 ..      21      95 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 1.5e-06
    PELOTA_1 23 KPgigEaTRvlLRRvPekvlvrdeee..pdlahlllLakekgvpveevpdl 71
                + g  EaT+ l R + e +++++++e  + l hl lL+++k+vp++ vp++
  EPX70574.1 33 RKGANEATKTLNRGISEFIVMAADTEpiEILLHLPLLCEDKNVPYVFVPSK 83
                55789***************999988667899*************999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       479  (0.0267165); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 944.85
//
Query:       EPX70575.1  [L=277]
Description: inositol polyphosphate kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-41  142.1   0.0    2.5e-41  141.7   0.0    1.1  1  IPK       Inositol polyphosphate kinase


Domain annotation for each model (and alignments):
>> IPK  Inositol polyphosphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.7   0.0   1.4e-45   2.5e-41       3     197 .]      86     269 ..      84     269 .. 0.88

  Alignments for each domain:
  == domain 1  score: 141.7 bits;  conditional E-value: 1.4e-45
                 EEE-TTTT-SSEEEEEEEESSSSS-TTSTCHHHHHHHHHHCCSTHHHHSEEEEEEEEEETTTTEEEEEEHHHHCT-SHHHHHHHHHHCCCSSSSCCHHH CS
         IPK   3 vLedltagfkkPcvlDvKlGtrtydedaseekrekqqkkskettseslGfrilGmkvykeeedeyltvdkkygrslskeevkealkkFlsngkslrkda 101
                  Le++++++k+Pcv+D+KlG+++++ das+ekr++++ +s+ tts+slGfri G+ v ++++++y t+++ +g+++ ++++ ++l+ F+s   s + ++
  EPX70575.1  86 ILENIIHDMKRPCVMDIKLGRQLWALDASPEKRARLDVVSQLTTSGSLGFRITGILVADKASRSYATYSTAWGKRIGNDTILQGLSVFFSPC-SNHLKK 183
                 69*******************************************************9999999**************************44.333344 PP

                 HHHHCHHHHHHHHHHHHHCSHSEEESSEEEEEEEETT......................SSEEEEEE--TTEEE--TSS--HHHHHHHHHHHHHHH CS
         IPK 102 kaaskllerLqelkqvlesqeslrfyssSLLfvyegdseasekaeekeaeeeeeeeskekkvevklIDFAhvvptesggpDegyllGlksLikile 197
                  +++k+ + L+++++ ++s ++ +f ssSLL+ y+ +        + e+++++ e++ ++ +++klID Ah+ + + g+ De++l+G++sL ++++
  EPX70575.1 184 FLLEKFSSLLEDFESDVSSLSV-EFRSSSLLLAYDLE--------SLENCTQDFEKEGSQLYNMKLIDLAHSNW-TLGSVDENTLFGVRSLRECFQ 269
                 4555555666666655555555.**************........45678888899999**************9.99**************99885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (277 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       396  (0.0220871); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 2007.10
//
Query:       EPX70576.1  [L=569]
Description: calnexin Cnx1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   3.3e-151  503.3   1.3   4.4e-151  502.9   1.3    1.2  1  Calreticulin  Calreticulin family


Domain annotation for each model (and alignments):
>> Calreticulin  Calreticulin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  502.9   1.3  2.4e-155  4.4e-151       2     366 ..      43     405 ..      42     406 .. 0.98

  Alignments for each domain:
  == domain 1  score: 502.9 bits;  conditional E-value: 2.4e-155
  Calreticulin   2 veqFeeeeelekrwikskakked...eeakYkgkwsveepkklkglegdkgLvlkskakhhaisaklekpiklkkkdLvvqYevklqeglecggayi 95 
                   veqF    ++++rw++s+ak+     ee++Y+g+w+vee+k+  +++g+ gLv+k++a+hhais+++++p++  +kdLvvqYev++q+gl+cggay+
    EPX70576.1  43 VEQFLG--DWTERWTPSHAKRVVngiEEMAYNGEWAVEESKSPGAVSGELGLVMKDAAAHHAISYEFDEPVDEPQKDLVVQYEVNAQDGLNCGGAYL 137
                   688987..9**********8776899*********************************************************************** PP

  Calreticulin  96 kLlseeeekdleefsdktpytimFGpdkcgstnkvhfilrkknpktgeieekhlkkpp.klkkdklthLytLilkpdntfeiridgkvvksgnlled 191
                   kLl e+ +    e+s++ py++mFGpdkcg +++vhfi++++np+++  +ekhl+++p +l +  +t+LytL+++pd+t+e+r++g++++sg+l++d
    EPX70576.1 138 KLLAERPN---GEMSNTVPYRVMFGPDKCGINDRVHFIFKHENPISHVSSEKHLDSKPaSLIRPGITNLYTLVVHPDQTYEVRVNGDIIRSGSLFTD 231
                   *****986...79******************************************9997888999******************************** PP

  Calreticulin 192 feppvnppkeidDpedkkPedWddrekipDpeavkPedwdekapekipdpeavkPedWledepelipdpeaekPedwdeeedgeweaplikNpkCee 288
                   f ppv pp e+ Dped kP+dW+d+++ipD +avkP+dwde+ap++ipdp+a +PedWl+dep +ipdp+a+kPedw++eedg+w+ap i NpkC e
    EPX70576.1 232 FLPPVLPPLEVYDPEDIKPQDWVDEAEIPDVNAVKPDDWDEDAPRMIPDPDALQPEDWLSDEPFYIPDPKAVKPEDWNDEEDGDWVAPEIANPKCLE 328
                   ************************************************************************************************* PP

  Calreticulin 289 asgCgkwkpplikNpkYkGkwkaplienpnYkGeWkprkipnpdyfedkkplkklepigaigfelwsmskdilfdniy 366
                   +sgCg+wk+pli Np+++G+w++p+i+np+Y GeW prkipnp+yf+d++p +++ pi +igfelw+m+ +i f+niy
    EPX70576.1 329 VSGCGEWKAPLIPNPNFRGPWTPPMIPNPDYIGEWIPRKIPNPNYFDDEHP-SHFGPIYGIGFELWTMQPNIRFSNIY 405
                   ***************************************************.88***********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (569 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       522  (0.0291148); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.27s 00:00:00.85 Elapsed: 00:00:00.42
# Mc/sec: 4051.45
//
Query:       EPX70577.1  [L=305]
Description: peroxin-13 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.3e-20   72.8   1.6    3.3e-20   72.8   1.6    1.9  2  Peroxin-13_N  Peroxin 13, N-terminal region
    3.3e-12   45.9   0.0    6.1e-12   45.0   0.0    1.5  1  SH3_2         Variant SH3 domain
    1.4e-11   44.1   0.0    2.4e-11   43.3   0.0    1.4  1  SH3_9         Variant SH3 domain
    2.1e-11   43.2   0.1    3.6e-11   42.5   0.1    1.4  1  SH3_1         SH3 domain


Domain annotation for each model (and alignments):
>> Peroxin-13_N  Peroxin 13, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.8   1.6   7.5e-24   3.3e-20      12     144 ..      87     204 ..      80     205 .. 0.80
   2 ?    3.3   0.2      0.02        90      66      99 ..     199     231 ..     190     244 .. 0.74

  Alignments for each domain:
  == domain 1  score: 72.8 bits;  conditional E-value: 7.5e-24
  Peroxin-13_N  12 atfqliesivgafgsfaqmLestymAthsSFfavvsvaeqfgrLketlgsvlsifalirllkkilskllglllekkkkekskaeefwkkfessskkk 108
                   ++++ ie i++++gs+aq++es  mA h S+ + vsv+++f++L+  +gs+++i++l++ lk ++s +lg+     +++  +++e+ +   ++s   
    EPX70577.1  87 SALRTIEGIISSVGSIAQVMESALMAAHMSYNTFVSVMDNFQMLRLSIGSLFDIVSLVKRLKLFISNILGVQ----SNNPLTKDEYDSYHIEES--- 176
                   57899******************************************************************5....445555555522222222... PP

  Peroxin-13_N 109 eekeskeekkkk.kisskplllflaaviglPyllkkl 144
                            k++ k+s+    l+++ ++ +Py l k+
    EPX70577.1 177 ---------KPSsKKSKVLSGLLFTSLFVFPYALIKI 204
                   .........111124555557788889999**99986 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.02
  Peroxin-13_N  66 falirllkkilskllglllekkkkekskaeefwk 99 
                   +ali+++kki+ k   +  ++kk++++++ ef k
    EPX70577.1 199 YALIKIFKKIYDKEKIIA-KEKKSKSIQELEFCK 231
                   79*********9988885.566777777666644 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.0   0.0   1.4e-15   6.1e-12       1      54 [.     229     286 ..     229     289 .. 0.86

  Alignments for each domain:
  == domain 1  score: 45.0 bits;  conditional E-value: 1.4e-15
                 EEEESS-B-S.CGCCB--B-TTEEEEEE...EEEECT.TEEEEEE.CCCEEEEEGCGE CS
       SH3_2   1 yvraiedyvg.edkseLsfkkGdvikvls.lgskdsd.gwwegev.gGrvGlfPsslv 54 
                 +++a +d+ + e++ eL ++kGd+i++ls + s++   +ww+g++ +G +G+fPs+++
  EPX70577.1 229 FCKAEFDFASrEPTVELALRKGDIIAILSkYDSTGAKsDWWYGRKrNGEKGWFPSNYC 286
                 69********677777************6655555559*****999*********986 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.3   0.0   5.4e-15   2.4e-11       1      47 [.     232     285 ..     232     287 .. 0.90

  Alignments for each domain:
  == domain 1  score: 43.3 bits;  conditional E-value: 5.4e-15
       SH3_9   1 Alypyepredd.eLsLqrGDvitviee.....sedgWlegsl.tGrtGlvPany 47 
                 A ++++ re++ eL L++GD+i ++++     + ++W++g++ +G++G++P+ny
  EPX70577.1 232 AEFDFASREPTvELALRKGDIIAILSKydstgAKSDWWYGRKrNGEKGWFPSNY 285
                 789**********************996665556******955*********** PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.5   0.1     8e-15   3.6e-11       1      48 []     231     283 ..     231     283 .. 0.95

  Alignments for each domain:
  == domain 1  score: 42.5 bits;  conditional E-value: 8e-15
                 EESSSBEXSS.TTBXEBSTTEEEEEEEECSS.....SEEEEEETTSTEEEEEEG CS
       SH3_1   1 iAlYDYeaee.sdELsfkkGDviivleksed.....gWwkgrlkgtgkeGliPs 48 
                 +A +D++ +e + EL ++kGD+i +l+k ++     +Ww gr ++ g++G++Ps
  EPX70577.1 231 KAEFDFASREpTVELALRKGDIIAILSKYDStgaksDWWYGRKRN-GEKGWFPS 283
                 699*******999***************9999999*********9.6******8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (305 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       627  (0.0349713); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2159.53
//
Query:       EPX70578.1  [L=429]
Description: lysine methyltransferase Set8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-11   44.8   0.0    2.9e-11   44.0   0.0    1.4  1  SET       SET domain


Domain annotation for each model (and alignments):
>> SET  SET domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.0   0.0   1.6e-15   2.9e-11       1     169 []      28     231 ..      28     231 .. 0.78

  Alignments for each domain:
  == domain 1  score: 44.0 bits;  conditional E-value: 1.6e-15
                 SCEEEESSXBXTTXEEEEEEECCEECHHHHHHHHHH..........................HTEEEEEXGGXX...............GGSX.HHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..........................xxxxxxxxxxxx...............xxxx.xxxxx RF
         SET   1 GrGvfAtedIpkgeficeypeeiiltkdeadksele..........................aylfslpeapkn...............laft.kelak 57 
                 G G++++e+  +g++++e+p ++++ +++ +   ++                           y++ l e++k+               + ++ ++ + 
  EPX70578.1  28 GKGLRSLEKCDPGTVLLEVPLSKVIDENFIRDFREKdktfasiatseewdamafrkqalfiiCYFKWLHEKQKDwnlylstfpsyvgtpVQWSeNQIQD 126
                 88****************996667777777777777777788999999999999999999997777777663333355555555666667776888888 PP

                 HHTTSSHHHHHHHHHHHHHHHHHHTHHHHHHHXTTTSXXXHCCCCCHCCCHEEEETEEEEEECCC...GTTGGGCEEXSSSSEEEEEEEETTSSEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         SET  58 asastllqklakdqkqaekedtdaalkasskaesdlnaskpeagafsaiagysidaralksgnga...gplarflNHsCdpNcnltvqnvlrgprvavf 153
                 ++++ l     ++ k + +e+++ +      + s +      + +   +a     +r+l+s +g+   +p+++++NHs + N    +++  +++ + v+
  EPX70578.1 127 LQGTSLFMPVIAKRKFLTEEWEELKSTHVNLWPSEI------SLSDWIHADALYSSRCLESPSGStvlAPVVDLCNHSNEANS--KWDF--TSDSLQVY 215
                 888888888888888888888888888888777777......222245555555599999999999************98888..9999..99****** PP

                 ESSXBXTTEEEEEXTT CS
                 xxxxxxxxxxxxxxxx RF
         SET 154 AtrdIkkGeEltidYg 169
                 A +  + G+E+t++Yg
  EPX70578.1 216 AEKALSVGDEITFNYG 231
                 ***************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (429 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       381  (0.0212505); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2975.98
//
Query:       EPX70579.1  [L=297]
Description: transcription elongation factor TFIIS [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-28   99.9   2.7    1.1e-28   99.9   2.7    2.1  2  TFIIS_M   Transcription factor S-II (TFIIS), central domain
    1.7e-18   66.2   8.3    2.8e-18   65.5   8.3    1.4  1  TFIIS_C   Transcription factor S-II (TFIIS)
    2.4e-09   37.1   0.3    5.9e-09   35.8   0.3    1.7  1  Med26     TFIIS helical bundle-like domain


Domain annotation for each model (and alignments):
>> TFIIS_M  Transcription factor S-II (TFIIS), central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1      0.21   1.3e+03      26      57 ..       4      34 ..       1      45 [. 0.75
   2 !   99.9   2.7   1.8e-32   1.1e-28       1     111 [.     135     243 ..     135     244 .. 0.95

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.21
                -THHHHHHHHHHHHHHHT------HHHHHHHH CS
     TFIIS_M 26 edveelaaeiEealfekekkstdkkykqkvrs 57
                e++++  a++E+a+ +  + +t  ++ +++r+
  EPX70579.1  4 EEIRSAKASLEKAIQS-RNTETMLDIMNRLRT 34
                4677778888888877.666677778888876 PP

  == domain 2  score: 99.9 bits;  conditional E-value: 1.8e-32
                 -HHHHHHHHHHHHHTT---...-.--THHHHHHHHHHHHHHHT------HHHHHHHHHHHHHS-TT-HHHHHTSSSS--STTTTS---TTTSS-HHHHH CS
     TFIIS_M   1 dkvRdkcrelLaealeedsseaeeeedveelaaeiEealfekekkstdkkykqkvrslvfNLkdkkNpeLrrrvlsgeispeklvkmspeElaseelke 99 
                 dk+R++c+ l+++al+ d +  + ++ + + + ei +++  +  ++t+++y++++rsl++NLkdk+Np+Lr +vls++is+++l++m++ Elase++++
  EPX70579.1 135 DKIRNNCVGLIYNALALDTDA-D-SSLILKRSIEIDAQVLARASGNTGSEYRNRMRSLYMNLKDKSNPKLRASVLSEDISAQRLSNMNSAELASEDRRK 231
                 79****************963.3.69************99978899***************************************************** PP

                 HHHHHHHHHHHT CS
     TFIIS_M 100 ereklekealee 111
                 e++kle+e+l++
  EPX70579.1 232 EDAKLEQENLFH 243
                 *********987 PP

>> TFIIS_C  Transcription factor S-II (TFIIS)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.5   8.3   4.7e-22   2.8e-18       1      39 []     257     295 ..     257     295 .. 0.98

  Alignments for each domain:
  == domain 1  score: 65.5 bits;  conditional E-value: 4.7e-22
     TFIIS_C   1 akCpkCgsreayffqlQtRsaDEpmtvfykCtkCghrWr 39 
                 ++C kC++++++++q+QtRsaDEpmt+f++C+ Cg+rW+
  EPX70579.1 257 FTCGKCKQKKVSYYQMQTRSADEPMTTFCECVVCGNRWK 295
                 68************************************7 PP

>> Med26  TFIIS helical bundle-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.8   0.3   9.9e-13   5.9e-09       1      52 [.      27      77 ..      27      78 .. 0.90

  Alignments for each domain:
  == domain 1  score: 35.8 bits;  conditional E-value: 9.9e-13
                HHHHHS---....H.HHHHHSHHHHHHHHHH-TTS-HHHHHHHHHHHHHHHHH CS
       Med26  1 kiLaqLeklpitte.tLkstgIGkvVnalrkhkhetaevktlAksLvekWkka 52
                +i+++L+  ++ te +Lk+t++G v+ +lr ++  +++v + A+++v+kWk  
  EPX70579.1 27 DIMNRLRTGVVATEeLLKETRLGLVIGKLRSYP--NEKVNECAREIVKKWKTD 77
                68999**9988777699************8876..****************76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (297 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       968  (0.0539907); expected 358.6 (0.02)
Passed bias filter:                      494  (0.0275531); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2250.61
//
Query:       EPX70580.1  [L=778]
Description: ATP-dependent 3' to 5' DNA helicase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-26   92.4   0.1    2.3e-25   89.6   0.0    2.2  2  ResIII      Type III restriction enzyme, res subunit
      1e-20   74.1   0.5    3.8e-20   72.3   0.3    2.1  2  Helicase_C  Helicase conserved C-terminal domain
    6.7e-16   58.5   0.0      2e-14   53.7   0.0    2.3  2  DEAD        DEAD/DEAH box helicase
  ------ inclusion threshold ------
      0.054   14.1   0.0       0.16   12.5   0.0    1.8  1  DUF4808     Domain of unknown function (DUF4808)


Domain annotation for each model (and alignments):
>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.6   0.0     5e-29   2.3e-25      25     169 ..     130     273 ..      92     275 .. 0.83
   2 ?   -0.3   0.1      0.21   9.4e+02      46      79 ..     469     502 ..     462     544 .. 0.73

  Alignments for each domain:
  == domain 1  score: 89.6 bits;  conditional E-value: 5e-29
                 SEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG.......GEEEESSS-B--.......-SEEEEEHHHHHHTH.. CS
      ResIII  25 krglikmaTGtGKTlvaaklierllkkgkeekflflvprkslleqtleefkkflseayke...igkkvsgdkkkakekdstnkkilvttiqsldadsee 120
                 +++l++++TG GKT+++a ++ +++++++  k++f++p+k ll+q ++++ +++  ++++    ++++s +++++   + + k+i+++t q+l++d+  
  EPX70580.1 130 HNLLLALPTGLGKTFISAVVMLNFYRWFPTGKIIFIAPTKPLLQQQRTAVVEITGVPTHNtseLNGNISAENRSK---EYHAKRIFFMTPQTLNNDL-- 223
                 4788********************************************999999998887555666677777777...9******************.. PP

                 ......HHHTTT-SEEEEETGGGTTS.T....TTHHHHHT---SEEEEEESS- CS
      ResIII 121 eeeeseellrdrfdviiiDEaHrlgakk....swreilekfkeavllglTATp 169
                     s   + +++ +++iDEaH++++++     +r++l+++ ++ +l+lTATp
  EPX70580.1 224 ---RSGLVDATSIVCLVIDEAHKATGSHpyaqVIRAVLKYNTHFRVLALTATP 273
                 ...88999999999************96333366666***************9 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.21
                 HHH-S.....-EEEEESSHHHHHHHHHHGGGGTG CS
      ResIII  46 erllkkgkeekflflvprkslleqtleefkkfls 79 
                 ++ ++++++++++++   ++  eq l++f++ ++
  EPX70580.1 469 QQAAQQYSNSRVMIFTEYRNTAEQILKAFSNEKP 502
                 5666777777999999999999999999976654 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       1.7   7.6e+03      18      57 ..     161     204 ..     157     208 .. 0.60
   2 !   72.3   0.3   8.4e-24   3.8e-20      11     110 ..     472     581 ..     456     582 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.7
                 EEEEEESSHHHHHH..HHHHHHHT..TSTEEEESTTSTHHHHHH CS
  Helicase_C  18 kilifvntidrlek..vklllekk..gikvavlhgelpqneree 57 
                 ki+ +++t+  l++  + +++ +     ++  l+g++++++r +
  EPX70580.1 161 KIIFIAPTKPLLQQqrTAVVEITGvpTHNTSELNGNISAENRSK 204
                 55555555554444443333222244678888999999999876 PP

  == domain 2  score: 72.3 bits;  conditional E-value: 8.4e-24
                 HHTTTTSEEEEEESSHHHHHH.HHHHHHHT.TSTEEEESTT........STHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHH CS
  Helicase_C  11 kleeeggkilifvntidrlek.vklllekk.gikvavlhge........lpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvts 99 
                  ++ ++++++if+++++++e+ +k + ++k  i+v  + g+        ++q+ ++ei++qf++g ++vL+at ++e+G+di + ++++ +d   ++ +
  EPX70580.1 472 AQQYSNSRVMIFTEYRNTAEQiLKAFSNEKpLIRVSLFVGQassvesagMSQKIQKEIISQFKSGVINVLVATCIGEEGLDIGDTDMIVCYDTSSSPIR 570
                 4677899************977666644445677777777777777778************************************************** PP

                 HHHHHTTSSST CS
  Helicase_C 100 yiqriGRtgRa 110
                 +iqr+GRtgR 
  EPX70580.1 571 MIQRMGRTGRK 581
                 **********6 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.7   0.0   4.5e-18     2e-14       8     171 ..     124     275 ..     117     280 .. 0.81
   2 ?    2.3   0.0     0.027   1.2e+02      43     103 ..     473     543 ..     405     552 .. 0.72

  Alignments for each domain:
  == domain 1  score: 53.7 bits;  conditional E-value: 4.5e-18
                 HHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCSEEEEEHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   8 iplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvdivvgtpg 106
                 ++++   +++l+a +TG GKT + ++ +l ++y+    ++ k+++++Pt+ L +q+ + + +++   + +++ + g+ +a++  ++  +  +i+++tp+
  EPX70580.1 124 CETAF-YHNLLLALPTGLGKTFISAVVML-NFYR--WFPTGKIIFIAPTKPLLQQQRTAVVEITGVPTHNTSELNGNISAENRSKEY-HAKRIFFMTPQ 217
                 55554.4699*************999999.6665..89999***********************97554666667777887777778.889******** PP

                 HHHHHHHCTSSHCTTEEEEEEETHHHHHHT.TTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 107 rlddllstgklnlsqvrflVlDEadrlldq.gfsdfinrilnqlpqitcdgklqrqvivlSATlpk 171
                  l + l++g ++  ++ +lV+DEa++   +  + + i+++l+           + +v++l+AT+ +
  EPX70580.1 218 TLNNDLRSGLVDATSIVCLVIDEAHKATGShPYAQVIRAVLKYN--------THFRVLALTATPGS 275
                 ******99******************999845555555554444........4466*******974 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.027
                 TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEET...........TSSHHHHHHHHHTT.CSEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...........xxxxxxxxxxxxxx.xxxxxx RF
        DEAD  43 kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliig...........gvaardqlskldng.vdivvg 103
                 ++ ++ +++i +  r  aeq+l+ +++ k    +rv+l++g           ++ +++ +s++++g ++++v+
  EPX70580.1 473 QQYSNSRVMIFTEYRNTAEQILKAFSNEKPL--IRVSLFVGqassvesagmsQKIQKEIISQFKSGvINVLVA 543
                 4667789999999999********9999986..4566666622222222111233333333334445555555 PP

>> DUF4808  Domain of unknown function (DUF4808)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   3.6e-05      0.16      19      60 ..     147     191 ..     143     245 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 3.6e-05
     DUF4808  19 aaialFfnrW...GKiRmLePyqpkfkqehrsscalvdldapqvq 60 
                 a+++l f rW   GKi  + P++p  +q+ ++++ ++++ +++++
  EPX70580.1 147 AVVMLNFYRWfptGKIIFIAPTKPLLQQQRTAVVEITGVPTHNTS 191
                 7999*************************8888777766543322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (778 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       804  (0.0448435); expected 358.6 (0.02)
Passed bias filter:                      485  (0.0270511); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.67u 0.24s 00:00:00.91 Elapsed: 00:00:00.40
# Mc/sec: 5767.37
//
Query:       EPX70581.1  [L=223]
Description: 5'-methylthioribulose-1-phosphate dehydratase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.9e-41  141.0   0.0    4.6e-41  140.8   0.0    1.1  1  Aldolase_II  Class II Aldolase and Adducin N-terminal domain


Domain annotation for each model (and alignments):
>> Aldolase_II  Class II Aldolase and Adducin N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.8   0.0   2.6e-45   4.6e-41       2     186 .]      20     216 ..      19     216 .. 0.85

  Alignments for each domain:
  == domain 1  score: 140.8 bits;  conditional E-value: 2.6e-45
                  HHHHHHHHHHHTTSSCTTBCEEEEEETSTTEEEEEBTSS-GGGHTGGGEEEEETTSCEEEECECSSSTB-TTHHHHHHHHHH-TT-SEEEEE--HHHH CS
  Aldolase_II   2 elaeasrllarrglvegtgGniSvrvpeedsflitpsgvdfeeltaedlvvvdldsgevvegkekggkpssetplHlaiykarpdaravvHtHspaav 99 
                   +++++++l++ g+v+gtgG i++r+  +d ++i+psgv++e+++ e+l+v++l++ e ++ + +++kps++tpl+la+y+  +da a++HtHs++a+
   EPX70581.1  20 LICKICQDLYNSGWVTGTGGGITIRS--GDAIVIAPSGVQKERMQLEHLFVMSLKTREYLHKPLQALKPSQCTPLFLAAYTC-RDAYACIHTHSQEAI 114
                  689**********************4..68999*********************989999998999***************6.6************** PP

                  HHHTCC...............STSCHCCSSHHHHC.HSS.....SEEEEES-SSTTCHHHHHHHHHHHH.H.S-SEEEETTTEEEEEESSHHHHHHHH CS
  Aldolase_II 100 alsala...............gkeglppltqeaaklllg.....devpvipyaapgteelgealaealk.e.dakavllrnHGlltvGetleeAvala 175
                  +ls ++               +   +p    +   +  +      ++p+i+++a+++++  ++l +a+  + +a+av++r HG++++G+t+++++ ++
   EPX70581.1 115 LLSQIFpdsdyfsasgfevlqH---IPR-GSKKNGF--YsvtetVRIPFINNTAHESDLH-DSLKAAILaYpEACAVIVRDHGIYCWGDTWQDTKMNT 205
                  ***7669999999996554431...222.2222222..13355689********886655.99999999647999*********************** PP

                  HHHHHHHHHHH CS
  Aldolase_II 176 etleeaaeiql 186
                  e++e++++++l
   EPX70581.1 206 EAVEYLFQAYL 216
                  ********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (223 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       426  (0.0237604); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.27s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1624.31
//
Query:       EPX70582.1  [L=532]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.8e-31  107.2   2.0    2.8e-31  107.2   2.0    2.4  2  DUF1604    Protein of unknown function (DUF1604)
  ------ inclusion threshold ------
      0.088   12.9   0.0       0.31   11.2   0.0    2.0  1  G-patch_2  G-patch domain


Domain annotation for each model (and alignments):
>> DUF1604  Protein of unknown function (DUF1604)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.2   2.0   3.1e-35   2.8e-31       2      78 ..      36     111 ..      35     117 .. 0.93
   2 ?   -1.2   0.3       0.2   1.8e+03      38      64 ..     299     324 ..     296     357 .. 0.64

  Alignments for each domain:
  == domain 1  score: 107.2 bits;  conditional E-value: 3.1e-35
     DUF1604   2 vpvwkqevtdekgrrrlhGAftGGfsaGyfntVGskeGwtPstfkSsrkerakkakkqrvedfmDeedleeleeskk 78 
                 +pvwkq+++de++r+r+hGAftGGfsaGyfn+VGskeGw+P+ ++Ss+++r +k +  + +d mDeed +++e sk 
  EPX70582.1  36 LPVWKQTARDERNRKRFHGAFTGGFSAGYFNSVGSKEGWQPKAWSSSKTDRGQK-AGLSLDDIMDEEDKNDQEMSKV 111
                 589**************************************************9.999************9987665 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.2
     DUF1604  38 eGwtPstfkSsrkerakkakkqrvedf 64 
                 eGw  s+f+Ss ++ +++++ q+ ++ 
  EPX70582.1 299 EGWV-SRFSSSAHSPSHTSSFQKSTNA 324
                 6775.6677777776666444444433 PP

>> G-patch_2  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   3.5e-05      0.31      17      60 ..     140     182 ..     138     183 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 3.5e-05
   G-patch_2  17 FGaAlLrGMGWkegqgigknkkgrvkpeepkrRpgrlGLGakpa 60 
                  G+ +Lr  GW+ ++ i++ + ++  ++e   R ++ GLG +++
  EPX70582.1 140 IGENILRNFGWNGKDFITSPA-KDCYEREDSVRSTTHGLGYQQD 182
                 6999********888888886.56799*************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (532 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       659  (0.0367561); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.32s 00:00:00.93 Elapsed: 00:00:00.56
# Mc/sec: 2874.67
//
Query:       EPX70583.1  [L=365]
Description: RecA family ATPase Rhp57 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.6e-85  285.8   0.0      3e-85  285.5   0.0    1.0  1  Rad51         Rad51
    7.1e-09   35.5   0.1    6.7e-06   25.8   0.0    2.4  2  RecA          recA bacterial DNA recombination protein
    2.8e-06   26.8   0.9    7.2e-06   25.5   0.1    2.1  2  ATPase        KaiC
    0.00017   21.2   0.0    0.00046   19.8   0.0    1.7  1  AAA_25        AAA domain
  ------ inclusion threshold ------
      0.059   13.9   0.5       0.15   12.6   0.1    1.8  2  ABC_tran      ABC transporter
      0.065   13.5   0.2       0.45   10.8   0.2    2.4  1  AAA_22        AAA domain
      0.078   13.1   0.0       0.14   12.3   0.0    1.6  1  AAA_33        AAA domain
       0.15   12.5   0.0       0.82   10.1   0.0    2.2  2  RNA_helicase  RNA helicase


Domain annotation for each model (and alignments):
>> Rad51  Rad51
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  285.5   0.0   1.4e-88     3e-85      16     252 ..      49     351 ..      23     354 .. 0.94

  Alignments for each domain:
  == domain 1  score: 285.5 bits;  conditional E-value: 1.4e-88
                 S-E.......................E--S-HHHHHHHTSSEESSSEEEEEESTTSSHHHHHHHHHHHTTS-TTTS--SSEEEEEESSS---GGGGHHH CS
       Rad51  16 llq.......................lttGskklDelLgGGietgsiteifGefrsGktqlchtlcvtvqlplelgGgegkavyidtegtfrperlvei 91 
                 l+q                       lttG+  lD+ LgGGi++g++te++Ge++sGk+qlc++lc+++qlp   gG +++av+i+te++++++rl+e+
  EPX70583.1  49 LIQiiqqvtlllrpkrkvasqikqsfLTTGDLVLDQKLGGGIPVGQLTEVCGESGSGKSQLCMQLCIMAQLPRAFGGLNKAAVFISTESGLETKRLFEL 147
                 44455555555666666666777788************************************************************************* PP

                 H....HHT.T--HHHHGGGEEEEE--ST.....THHHHHHH.HTHHHHHHS-EEEEEEETTTGGGCH-.........------THHHHHHHHHHHHHHH CS
       Rad51  92 a....ery.kldkeevlenvayaRayti.....ehqeellq.qaaallaedkfallivDsvtalyRtd.........fsgrgelakRqqklgkllrtLr 170
                 a    +r+ ++++ +v ++++++R+yti     e+qe+++q q+++l++++ ++l+++Dsv+a+yR++         +++++++a R+++lgkl++ Lr
  EPX70583.1 148 AkyipDRFpEAEEGDVFIRNPGDRVYTIlcpdlESQEHIIQyQLPILFQRESIGLVVLDSVAANYRAElkynrskshYTDLNNIAIRGNQLGKLASILR 246
                 ****9********************************************************************************************** PP

                 HHHHHH--EEEEEEE----............---.------......------HHHHHHHH-SEEEEEEE-ST.....TEEEEEEES-SSS-S-EEEEE CS
       Rad51 171 kladefevavvitnqvvaq............vdgqaalfsa......dpkkPigGlvlahasttRlalrkgkg.....eeRivkvvdsPnlpeleavfa 246
                  l+ ++e+avvi+nqv+++            +d+q+++f++      +pk+P++Glv+++++ tRlal+k+ +      +Ri++vv+sPn ++ ++ + 
  EPX70583.1 247 DLSRQYEAAVVIANQVSDRltrdydaiglfsLDYQSQWFNGwddldpNPKIPSLGLVWTNNVNTRLALIKRADsatvkARRILRVVYSPNAARIDVPVL 345
                 *************************************************************************9999889******************* PP

                 EETTEE CS
       Rad51 247 igeeGi 252
                 ig+ Gi
  EPX70583.1 346 IGSMGI 351
                 *****9 PP

>> RecA  recA bacterial DNA recombination protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   0.0     3e-09   6.7e-06      30      96 ..      71     142 ..      52     151 .. 0.78
   2 !    7.3   0.0    0.0013       2.9     125     191 ..     193     264 ..     173     271 .. 0.71

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 3e-09
                 ---EE--S-HHHHHHTSSSSEETTSEEEEEESTTSSHHHHHHH..HHHHHHHT....T--EEEEESS----HH CS
        RecA  30 kvetissGslaldialGiGGlpkGriieiyGpessGkttlalh..aiaeaqkk....ggvaafidaehaldpk 96 
                 k + +++G l ld+ lG GG+p G+++e+ G   sGk+ l+++  ++a+  ++    ++ a+fi +e  l++k
  EPX70583.1  71 KQSFLTTGDLVLDQKLG-GGIPVGQLTEVCGESGSGKSQLCMQlcIMAQLPRAfgglNKAAVFISTESGLETK 142
                 445689***********.*******************998766115666655532223468899999888765 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0013
                 HHHTTT--SEEEEE-TTT---STT-----------HHH..HHHHHHHHHHHHHHT....TT--EEEEEEE--- CS
        RecA 125 alvrsgaidlivvdsvaalvpkaeieGemgdskvglqa..rlmsqalrkltgais....ksntvvifinqire 191
                 +l +  +i l+v+dsvaa   +ae++ + ++s+ +      +  + l kl++ ++    + +++v+  nq+ +
  EPX70583.1 193 ILFQRESIGLVVLDSVAAN-YRAELKYNRSKSHYTDLNniAIRGNQLGKLASILRdlsrQYEAAVVIANQVSD 264
                 577889***********95.699**999999998754401445667778877664211134667777788765 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1      0.71   1.6e+03      81     124 ..      23      66 ..       6      73 .. 0.76
   2 !   25.5   0.1   3.2e-09   7.2e-06       7      58 ..      81     137 ..      75     153 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.71
      ATPase  81 gklaiidasesaeesaeekdkedleelieelaeaikeikakrvv 124
                   +  id+ + + e+ e++++ + +eli+ ++++   ++ kr v
  EPX70583.1  23 ADVSTIDLLTIDVEDLEKRTNCKKDELIQIIQQVTLLLRPKRKV 66 
                 46778888888888888888888888998888887777776655 PP

  == domain 2  score: 25.5 bits;  conditional E-value: 3.2e-09
      ATPase   7 glDeilkgGipegrvvlitGepGtGKtifalqFlik.gaek....ygepgvfvtvee 58 
                  lD+ l gGip g+ + ++Ge+G+GK+ +++q  i  ++ +     +++ vf+++e+
  EPX70583.1  81 VLDQKLGGGIPVGQLTEVCGESGSGKSQLCMQLCIMaQLPRafggLNKAAVFISTES 137
                 69******************************8664133221111466777777775 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   2.1e-07   0.00046      27     189 ..      87     262 ..      79     265 .. 0.75

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 2.1e-07
      AAA_25  27 kgllpagelallaGapgtGKttlaldlalavatGkpwlgpvapeqgkVlyvsaEdsedelrrRlravgeal......rddarllvldlagv.eslpLfa 118
                 +g +p g l+ ++G +g+GK+ l+++l++   + + + g     + + +++s+E +  e+ +Rl ++ + +      ++ +++++ +  ++   +   +
  EPX70583.1  87 GGGIPVGQLTEVCGESGSGKSQLCMQLCIMAQLPRAFGG----LNKAAVFISTESGL-ET-KRLFELAKYIpdrfpeAEEGDVFIRNPGDRvYTILCPD 179
                 566799*********************997778776655....5789*********9.55.55555666668888886677777777666666666667 PP

      AAA_25 119 kdrggtlltadvdaleaaieevegvrlvviDplsralgg..densnsd................vgalvealeriarrtgaavllvhHv 189
                 +++++++++ ++       ++ e ++lvv+D++++ +++      n+                  g+l + l++++r++ aav++  +v
  EPX70583.1 180 LESQEHIIQYQL---PILFQR-ESIGLVVLDSVAANYRAelK--YNRSkshytdlnniairgnqLGKLASILRDLSRQYEAAVVIANQV 262
                 788888877664...333344.88***********9999543..443334788888888887655888888888888888888877665 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       3.1   6.8e+03      77     102 ..      41      66 ..      13      77 .. 0.56
   2 ?   12.6   0.1   6.7e-05      0.15       7      32 ..      89     114 ..      84     122 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 3.1
                 HHHHHHTCHHHHHHHSTTGGTTCBGE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  77 renesdeeiekalsklglkelkdtvv 102
                 r+n +++e+ ++++++ l   ++++v
  EPX70583.1  41 RTNCKKDELIQIIQQVTLLLRPKRKV 66 
                 22234444555555555544444444 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 6.7e-05
                 EEETTSEEEEEESTTSSHHHHHHHHT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   7 klkegekvaivGenGaGKStLlklla 32 
                  +  g+++ + Ge+G+GKS L++ l+
  EPX70583.1  89 GIPVGQLTEVCGESGSGKSQLCMQLC 114
                 57789****************98876 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.2    0.0002      0.45       7      25 ..      95     113 ..      92     262 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.0002
      AAA_22   7 ilvvtGesGtGKTtllrrl 25 
                 ++ v+GesG+GK+ l+ +l
  EPX70583.1  95 LTEVCGESGSGKSQLCMQL 113
                 6779*********999776 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   6.2e-05      0.14       1      24 [.      95     120 ..      95     246 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 6.2e-05
      AAA_33   1 lvllvGlpGsGKstlaerl..lkklg 24 
                 l++++G +GsGKs+l  +l  +++l+
  EPX70583.1  95 LTEVCGESGSGKSQLCMQLciMAQLP 120
                 6789**************95545555 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00037      0.82       3      21 ..      98     116 ..      97     139 .. 0.82
   2 ?   -2.2   0.0       2.4   5.3e+03      17      43 ..     146     172 ..     141     174 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00037
  RNA_helicase   3 lyGpsgeGKStlakeLaka 21 
                   ++G+sg GKS+l+ +L+  
    EPX70583.1  98 VCGESGSGKSQLCMQLCIM 116
                   79*************9854 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 2.4
  RNA_helicase  17 eLakallkklklkkkdsvysrnpeddf 43 
                   eLak + +++ + ++++v++rnp d +
    EPX70583.1 146 ELAKYIPDRFPEAEEGDVFIRNPGDRV 172
                   688888899999999999999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (365 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       546  (0.0304535); expected 358.6 (0.02)
Passed bias filter:                      495  (0.0276089); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.57u 0.28s 00:00:00.85 Elapsed: 00:00:00.46
# Mc/sec: 2397.88
//
Query:       EPX70584.1  [L=239]
Description: phosphatase activator [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.017   15.3   0.2      0.017   15.3   0.2    1.6  2  zf-CRD    Cysteine rich domain with multizinc binding regions
        4.8    7.0   7.4        5.1    6.9   0.1    3.5  4  DUF4219   Domain of unknown function (DUF4219)


Domain annotation for each model (and alignments):
>> zf-CRD  Cysteine rich domain with multizinc binding regions
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.2      0.55     5e+03      37      46 ..      70      79 ..      63      88 .. 0.73
   2 ?   15.3   0.2   1.9e-06     0.017      48     140 ..     124     221 ..     120     229 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 0.55
      zf-CRD 37 gvpqqCelCk 46
                + pq+C  C+
  EPX70584.1 70 STPQRCLKCH 79
                4577887775 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 1.9e-06
      zf-CRD  48 pfCnlYw......kgcsraecsglLkpi..eekliekipeevlegneveqkilkdylaekgltlqdvlkevlekldkgelkrtrkklnlseakitsdtv 138
                  fC++Y       +g++++  ++lL     +++ +e+ p++++ gn+ e++ + + l++ g++  + +++ +++ ++ +l++++ ++ +s+    ++  
  EPX70584.1 124 EFCDIYIisekvhQGVNSNVKEKLLDLYykDNNIFETSPNSLFLGNKKERSAFVQLLNKCGISKGENWSQRVKEPKRMSLSSYHVTTLCST---AKNAG 219
                 6******996666666666666666633559********************************9999999888888877766666666553...34555 PP

      zf-CRD 139 lC 140
                 lC
  EPX70584.1 220 LC 221
                 55 PP

>> DUF4219  Domain of unknown function (DUF4219)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.16   1.4e+03      12      18 ..      75      81 ..      74      82 .. 0.85
   2 ?    6.9   0.1   0.00057       5.1       3      12 ..     100     109 ..      98     109 .. 0.85
   3 ?    2.2   0.1     0.017   1.5e+02       7      14 ..     189     196 ..     189     197 .. 0.89
   4 ?   -1.1   0.1      0.19   1.7e+03      16      26 ..     224     237 ..     222     238 .. 0.70

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.16
     DUF4219 12 rMklyLi 18
                + k++Li
  EPX70584.1 75 CLKCHLI 81
                99****8 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.00057
     DUF4219   3 gtNYatWklr 12 
                 ++NY+ Wk++
  EPX70584.1 100 NSNYSPWKIK 109
                 69******97 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.017
     DUF4219   7 atWklrMk 14 
                 ++W+ r+k
  EPX70584.1 189 ENWSQRVK 196
                 69*****9 PP

  == domain 4  score: -1.1 bits;  conditional E-value: 0.19
     DUF4219  16 yLiaqd...LWevV 26 
                 +L+++    +W+++
  EPX70584.1 224 LLQFWRkpgVWHAI 237
                 67777666699987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       500  (0.0278878); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1807.31
//
Query:       EPX70585.1  [L=649]
Description: ATP-dependent RNA helicase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.7e-14   53.3   0.0    5.2e-14   52.5   0.0    1.5  1  HA2          Helicase associated domain (HA2)
    2.1e-10   40.9   0.0    6.8e-10   39.3   0.0    1.9  1  Helicase_C   Helicase conserved C-terminal domain
    6.3e-10   39.3   0.0    1.6e-09   38.0   0.0    1.7  1  OB_NTP_bind  Oligonucleotide/oligosaccharide-binding (OB)-fol
    1.3e-05   25.0   0.0    2.2e-05   24.3   0.0    1.4  1  DEAD         DEAD/DEAH box helicase
    0.00025   21.3   0.1    0.00062   20.1   0.1    1.7  1  AAA_22       AAA domain
     0.0066   16.8   0.0      0.017   15.5   0.0    1.6  1  AAA_19       AAA domain
     0.0072   16.4   0.3       0.47   10.5   0.3    2.5  1  AAA_14       AAA domain
  ------ inclusion threshold ------
      0.011   15.5   0.0      0.018   14.8   0.0    1.3  1  AAA_30       AAA domain
      0.032   14.8   0.0      0.061   13.8   0.0    1.4  1  ABC_tran     ABC transporter
       0.17   12.4   1.3       0.48   10.9   1.3    1.7  1  AAA_23       AAA domain
       0.27   11.7   1.6        1.9    8.9   1.6    2.2  1  AAA          ATPase family associated with various cellular a


Domain annotation for each model (and alignments):
>> HA2  Helicase associated domain (HA2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.5   0.0   3.2e-17   5.2e-14       1      76 [.     422     496 ..     422     543 .. 0.84

  Alignments for each domain:
  == domain 1  score: 52.5 bits;  conditional E-value: 3.2e-17
         HA2   1 AlelLvalgALdeegnlT.elGrkmaelPlsprlakmLlaaaeleegcldevitivAalsveeifleeneeekeeee 76 
                 Ale+L+ lgA+d+  nlT + G +m+elPl+ rl+k Ll +a++  +c+  ++ iv+++ ++++f +++++++e ++
  EPX70585.1 422 ALEDLYFLGAIDDYSNLTdPTGFQMVELPLDARLSKALLSSATY--DCTYAMLNIVSVVMAGDVFYRPARNHHEATA 496
                 89****************99*********************888..***********************98776554 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.3   0.0   4.2e-13   6.8e-10       8     110 ..     232     360 ..     225     361 .. 0.82

  Alignments for each domain:
  == domain 1  score: 39.3 bits;  conditional E-value: 4.2e-13
                 HHHHHTTTTSEEEEEESSHHHHHH.HHHHHHHT.........TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSS.. CS
  Helicase_C   8 ellkleeeggkilifvntidrlek.vklllekk.........gikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlp.. 94 
                 ++ +++   g+il+f++ ++++++ vk + e +          +  ++l++ l+ +e++++++ + +  ++v+ +t++ae +++i+++ +Vi+ +l+  
  EPX70585.1 232 NI-NSSYPSGDILVFLTDRREVDEcVKRI-EAFsvttpedlpMLVPLPLYSGLTMDEQLRVFDIYEQRFRKVIFCTNIAEASVTIDGIVYVIDSGLCkl 328
                 44.46778999*********998874555.222344455566788889*****************776666**************************77 PP

                 ..SSH..............HHHHHHHTTSSST CS
  Helicase_C  95 ..rnv..............tsyiqriGRtgRa 110
                   +n+              +++iqr GR+gR 
  EPX70585.1 329 riFNPysrisklirvpiskSNAIQRTGRAGRT 360
                 7755588899999999999************7 PP

>> OB_NTP_bind  Oligonucleotide/oligosaccharide-binding (OB)-fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.0   0.0   9.8e-13   1.6e-09       3      79 ..     573     644 ..     571     647 .. 0.93

  Alignments for each domain:
  == domain 1  score: 38.0 bits;  conditional E-value: 9.8e-13
                  HHHHHHHTTCEEEEEETTCCEEETTTCEEEEE-TTSTTTTT...TSSSEEEEEEEEESSS.EEEEEEEEE-HHHHHHH CS
  OB_NTP_bind   3 aillaGlypqiarkdpskkdyktartktrvfihpsSvlaknekekepewvvytelvettk.lylrdltaidpawLllf 79 
                   +ll G++ ++a+ ++ ++ ykt + + +v i   S++++    k+ +w+++t++ve     +++++t+i++ wL++f
   EPX70585.1 573 ECLLQGFFRNVAHLQDDGS-YKTIS-GSPVWIDQKSTMNN----KNIPWIMFTSMVEYEGrAFINGITKIESKWLEKF 644
                  699*********8888887.****8.*************8....*************9766***************99 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.3   0.0   1.3e-08   2.2e-05      15     173 ..      42     186 ..      19     189 .. 0.75

  Alignments for each domain:
  == domain 1  score: 24.3 bits;  conditional E-value: 1.3e-08
                 CEEEEEESTTSSHHHHHHHHHHHHHHHS.TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCSEEEEEHHHHHH.H CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.x RF
        DEAD  15 gdvlvaaeTGsGKTlaflipvlqivyet.kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvdivvgtpgrldd.l 111
                 +  l++++TG GKT+       q +yet  +k+g+ + +  P r  a+ +++++++ +k+   +v   + g + + ++++  ++++i ++t g l++ +
  EPX70585.1  42 QVTLLHGHTGCGKTTQLP----QYLYETgWTKEGKIIGCTQPRRLVARSVASRVSEELKT---EVG-KTCGYKIQFEHNVS-SETKIEYMTDGSLLKeI 131
                 456799********9743....44667655788988999****************99994...233.33356676777777.88*************45 PP

                 HHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBS.HHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxx RF
        DEAD 112 lstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlp.kdv 173
                 l++    l++ +++ +DE+++   +   d +  il+++     + + + +vi+ SA ++ +++
  EPX70585.1 132 LTDPL--LERYSVIMIDEVHERTVN--IDLLLGILKRI---LLKRP-DLRVILASASANiQKL 186
                 55555..**************9998..66666666666...55555.445******9986665 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.1   3.8e-07   0.00062       6     128 ..      42     177 ..      38     186 .. 0.66

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 3.8e-07
      AAA_22   6 gilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelka...................erlsseellealeqa 85 
                 ++++++G++G+GKTt l ++l++   +     ++ +++ +t p     +++++++ ++l+ e  +                   +  + + l e l++ 
  EPX70585.1  42 QVTLLHGHTGCGKTTQLPQYLYETG-WT----KEGKIIGCTQPRRLVARSVASRVSEELKTEVGKtcgykiqfehnvssetkieYMTDGSLLKEILTDP 135
                 6799******************973.42....2333333333333345555555555555444447777888888888888885555666666999999 PP

      AAA_22  86 lraravielliiDEaqhlr.s.eealeeL.rsllnlsrkgvqliLv 128
                 l +r+   +++iDE++  + + + +l  L r+ll+  r ++++iL+
  EPX70585.1 136 LLERYS--VIMIDEVHERTvNiDLLLGILkRILLK--RPDLRVILA 177
                 999999..********9633334444444555666..878888776 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0     1e-05     0.017      11     126 ..      42     166 ..      36     175 .. 0.68

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1e-05
      AAA_19  11 kvllvtaGpGtGKTrvlkhivallvelggvkp......eeillvaftgrAakelrerl.aalgaeatTiHrlalldfddlltealelleeaeeekklqe 102
                 +v l+ +  G+GKT+ l + + +  ++++ k       +++++ ++++r  +el++++ ++ g +++  H+++  +  +  ++  +ll+e  + ++l e
  EPX70585.1  42 QVTLLHGHTGCGKTTQLPQYLYETGWTKEGKIigctqpRRLVARSVASRVSEELKTEVgKTCGYKIQFEHNVSSETKIE-YMTDGSLLKEILT-DPLLE 138
                 678999*************999999999877666666688888888888888887766234555688888884432222.2234455565555.55558 PP

      AAA_19 103 ee.llivDEfqd..vd.elqyrLlkall 126
                 ++ ++++DE+ +  v+ +l   +lk++l
  EPX70585.1 139 RYsVIMIDEVHErtVNiDLLLGILKRIL 166
                 887******9872245555556666655 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.3   0.00029      0.47       4     103 ..      43     182 ..      40     192 .. 0.55

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00029
      AAA_14   4 ilvitGaRrvGKTtllkqlikell..........vkkesilyinldderd.................................kkladpe......... 50 
                 + ++ G   +GKTt l q+++e            +           ++r                                  +     e         
  EPX70585.1  43 VTLLHGHTGCGKTTQLPQYLYETGwtkegkiigcT-----------QPRRlvarsvasrvseelktevgktcgykiqfehnvsS-----Etkieymtdg 125
                 67788888888888888888887763333333332...........22222233333333444455555555544433322211.....1112222122 PP

      AAA_14  51 kllelileklke.......ekktylflDEiqev....pewekalkslvdegknldvivtGSnsk 103
                 +ll+       e       e+ +++++DE++e     + +  +lk+++ ++++l+vi++  ++ 
  EPX70585.1 126 SLLK-------EiltdpllERYSVIMIDEVHERtvniDLLLGILKRILLKRPDLRVILASASAN 182
                 2233.......133446666888999***99874444666777777777888999988776654 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   1.1e-05     0.018      19      97 ..      42     148 ..      33     177 .. 0.71

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.1e-05
      AAA_30  19 rvavltGpAGtGKttalkal..reaweaag........grviglAptgkaAkvLa..................eelgieastiakllkrlkgrarlepg 89 
                 +v++l+G  G GKtt l ++  +  w+++g        +r+++ +  ++++++L+                   e+ ie +t  +llk+      le+ 
  EPX70585.1  42 QVTLLHGHTGCGKTTQLPQYlyETGWTKEGkiigctqpRRLVARSVASRVSEELKtevgktcgykiqfehnvsSETKIEYMTDGSLLKEILTDPLLERY 140
                 699**************99877999****9888888888888888888888888843333333333333333324445666666666555554567777 PP

      AAA_30  90 tllivDEa 97 
                 +++++DE+
  EPX70585.1 141 SVIMIDEV 148
                 99999997 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   3.7e-05     0.061       8      43 ..      38      89 ..      33     182 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 3.7e-05
                EETTSEEEEEESTTSSHHHHH.HHHTTSS--SEEEE...............E CS
                xxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxx...............x RF
    ABC_tran  8 lkegekvaivGenGaGKStLl.kllagllkpteGei...............l 43
                ++  +++ + G++G+GK+t l + l++    +eG+i                
  EPX70585.1 38 IETFQVTLLHGHTGCGKTTQLpQYLYETGWTKEGKIigctqprrlvarsvaS 89
                6778999************662778887788999995555555333333330 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   1.3    0.0003      0.48      20      36 ..      42      58 ..      38     207 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.0003
      AAA_23 20 gltlItGpNGaGKTTil 36
                 +tl++G++G+GKTT l
  EPX70585.1 42 QVTLLHGHTGCGKTTQL 58
                58*************65 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   1.6    0.0012       1.9       2      70 ..      45     151 ..      44     200 .. 0.58

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0012
                 EEESSTTSSHHHHHHHHHHHHTHE.............EEEEETTTCSSS...........................STTHHHHHHHHHHHH.HHHTSTS CS
         AAA   2 llyGppGtGKTllakavakelgve.............fleisgsellsk...........................yvgesekkirelfke.akekakp 59 
                 ll+G  G+GKT+   +   e+g +             ++  s+++ +s+                           y+ ++ + ++e++++ + e  + 
  EPX70585.1  45 LLHGHTGCGKTTQLPQYLYETGWTkegkiigctqprrLVARSVASRVSEelktevgktcgykiqfehnvssetkieYMTDG-SLLKEILTDpLLE--RY 140
                 89**********999999997533344444444445533333333332345555555555555555444444444344444.3444444441333..35 PP

                 EEEEEETGGGH CS
         AAA  60 silfiDEidal 70 
                 s+++iDE+++ 
  EPX70585.1 141 SVIMIDEVHER 151
                 99999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (649 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       613  (0.0341904); expected 358.6 (0.02)
Passed bias filter:                      524  (0.0292264); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.64u 0.32s 00:00:00.96 Elapsed: 00:00:00.48
# Mc/sec: 4094.50
//
Query:       EPX70586.1  [L=1011]
Description: ubiquitin-protein ligase E4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   2.7e-199  663.9  22.1   3.4e-199  663.5  22.1    1.1  1  Ufd2P_core     Ubiquitin elongating factor core
    4.2e-28   97.3   0.7    1.8e-27   95.3   0.5    2.3  2  U-box          U-box domain
  ------ inclusion threshold ------
      0.014   15.4   1.0        1.7    8.7   0.0    3.4  3  SCAPER_N       S phase cyclin A-associated protein in the end
       0.02   15.4   0.0        5.5    7.6   0.0    3.3  3  FliG_N         FliG N-terminal domain
      0.056   13.6   2.1        1.2    9.3   0.0    3.2  3  Bromo_TP_like  Histone-fold protein


Domain annotation for each model (and alignments):
>> Ufd2P_core  Ubiquitin elongating factor core
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  663.5  22.1  9.4e-203  3.4e-199       1     625 []     291     916 ..     291     916 .. 0.97

  Alignments for each domain:
  == domain 1  score: 663.5 bits;  conditional E-value: 9.4e-203
                 THHHHT--TTS....HHHHHHHT..TT-TT--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHT-GGGGSSS--GGGS--HHH CS
  Ufd2P_core   1 LGpllslsvlpdenepevakkyFsepktrsksdlkstysslrqelktiqenlveiiknllkassesRervlkwlakilnlNekrakiqvdpskvssdgf 99 
                 LG++ sl+v++    +eva++yFs++k+rs +d++s++sslr  + ++qe+l++i+++l++ s+e Re+vl++la ++n+N+kr+ +qvd+   +sd+ 
  EPX70586.1 291 LGRISSLTVFT----QEVANRYFSNSKDRSMQDITSSISSLRVVITSYQEQLFQIFNALIRTSPEIRENVLDFLAMVVNVNHKRQSLQVDQFDITSDAC 385
                 8**********....679********************************************************************************* PP

                 HHHHHHHHHHHHGGGGSTT-TTGGGS-TTTTSS.-SSS--TT--BSSB-HHHHHHHH...HHCTTS---HHHHHHHHHHHHHHHTHHHHHHHHHTHHHH CS
  Ufd2P_core 100 mlNllavLlrLcepfldatfskidkidpnylllpskrldlkdetrlnadeeeveefy...eqkekekpnFiteiFfltlkalhlglkpaisefkrllqe 195
                 mlNl +vL rL+epfld +fsk+d+++++yl++ ++r+d+k+et+lnad++++eefy   ++    ++nFi++iFfl+l ++h+g+++a++ ++++l +
  EPX70586.1 386 MLNLAYVLNRLSEPFLDIKFSKLDRVQTEYLRR-HPRIDFKEETKLNADQKSSEEFYshcFEG---PNNFISDIFFLNLSYHHFGINAAVKALEQTLVS 480
                 *******************************77.*********************99544444...66******************************* PP

                 HHHHHHHHHHHTT-.........HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHHHSTT--.TTSS---S-SSHTS-TT CS
  Ufd2P_core 196 lkrlqdeleeleae.........aaqleeqlkklkkelekllseklaleavlldpellqellkFlrlvaawllrvadpknl.kpkkklklPlpeespeq 284
                 +++ ++  e+leae         a+++++q+++l ++++   s ++++e++l +p+  +++ +Fl++v+awllrva++  + +pk +l lP++e++pe 
  EPX70586.1 481 IRDSEKLRERLEAEqavnsnaflARRFSAQIDRLYQRIDLDRSFVHCYEIMLTQPSETSRSYNFLNFVMAWLLRVANNAASdYPKAPLVLPFSETAPEL 579
                 ******999999999*************************************************************888888***************** PP

                 GGGSBTHHHHHHHHHHHHHTTSTT-TTTT.-TTH..HHHHHHHHHHHH-TTS---HHHHHHHHHHHHHCCS--TT.--TTHHHHHH-HHHHCCHHHHHH CS
  Ufd2P_core 285 fkvlPeffledivdfllfllrlkpkvlesllssldldeliefiivflrsseyiknphlraklvevlfkgslplse.kgalkklleshelakkhLlkaLl 382
                 fk+lPe+f+e i +++l l++ ++++l++  +s+  d+l+ef++++l++s+yiknp+lraklve+lf+g ++ ++ ++++ ++l+++++a+k L++aL+
  EPX70586.1 580 FKNLPEYFIEAITEYVLSLFKTSSSTLTT--HSS--DTLCEFCVTLLTKSSYIKNPYLRAKLVEILFYGVQNQHGqPEVMIDVLSTSHIATKWLIPALM 674
                 **********************9999999..555..*********************************9554446779******************** PP

                 HHHHHCCCT-SSSSSTCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---....-----H CS
  Ufd2P_core 383 kfYidvEktgqssqFydKfniRyniseilkslwknesyrnqltklakeneelFvrFinlllNDvtflldealskLkeikelqeeledqeewsslseeer 481
                  fYi++E+tgqs+qFydKfniR++i+e+++++wk + y  +l ++ k+n  +Fv+F++l+lND+t+lldeal kLk+i++lqe  + q+ +  +s+++ 
  EPX70586.1 675 GFYIEIESTGQSTQFYDKFNIRFYICEVFRTIWKLPAYFGKLEQEQKTNLPFFVKFVALMLNDATYLLDEALLKLKDIHDLQERVN-QAINTGESNQNV 772
                 ***********************************************************************************887.55555677799* PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-GGGGCSHHHHHHHHHHHHHHHHHHHSHHHHT---SSGGGGT--HHHHHHHHHHHHHHCTT-HHH CS
  Ufd2P_core 482 qekeesleqlerqaksylqlanetvkllklltkeipepfltpeivdrlaamLnynLdqLvGpkcknLkVknpekynFrPkelLssiveiYlnLskeeeF 580
                 qe++++l  +er+a  y+ql+net+ +l l+t++ip++f++ eiv+rlaamLnynL++L+Gp+c+nLkV++p kynF+Pk+lLs i+++YlnL++e++F
  EPX70586.1 773 QESQQNLVATERHASVYCQLGNETILMLRLFTSSIPKAFCALEIVERLAAMLNYNLQALCGPRCRNLKVRDPTKYNFDPKSLLSTILDVYLNLCNEDNF 871
                 *************************************************************************************************** PP

                 HHHHHH-TTT--HHHHHHHHHHHTTSTSSTHHHHHHHHHHHHHHH CS
  Ufd2P_core 581 vkavakDgRsYkkelFekavrilkregllseeelekfkelaqkve 625
                 v+ava+DgRsY+ke+F++a  i+++++l+s+ ++e+++++++kve
  EPX70586.1 872 VEAVAHDGRSYSKEIFDRALGIVRKHNLKSSFDVENISDFVNKVE 916
                 *******************************************96 PP

>> U-box  U-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       2.5     9e+03      39      63 ..     612     636 ..     603     639 .. 0.77
   2 !   95.3   0.5   5.1e-31   1.8e-27       1      70 [.     932    1001 ..     932    1004 .. 0.96

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 2.5
                 SSB-TTT-SB--GGGSEE-HHHHHH CS
       U-box  39 dktdPftrepltqdqlipnlelKek 63 
                 d  + f ++ lt++  i n+ l++k
  EPX70586.1 612 DTLCEFCVTLLTKSSYIKNPYLRAK 636
                 4667788889999999999999987 PP

  == domain 2  score: 95.3 bits;  conditional E-value: 5.1e-31
                  SSGGGB-TTT-SB-SSEEEETTT.EEEEHHHHHHHHTT.SSB-TTT-SB--GGGSEE-HHHHHHHHHHHHH CS
       U-box    1 iPdefldpitlelmkdPvilpsg.vvvdrstiekhllsrdktdPftrepltqdqlipnlelKekIdeflee 70  
                  +Pd fldp+++++mkdPvilp++ +++drsti++hlls d+tdPf+r+plt ++++pn +l+e+I++++++
  EPX70586.1  932 APDHFLDPLMFTIMKDPVILPRSgMSIDRSTIKAHLLS-DNTDPFNRTPLTLEDVTPNDALREEIEAYMKS 1001
                  6********************888**************.*****************************997 PP

>> SCAPER_N  S phase cyclin A-associated protein in the endoplasmic reticulum
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.0   0.00048       1.7      15      49 ..     500     534 ..     482     569 .. 0.81
   2 ?    1.5   0.0     0.084     3e+02      20      50 ..     753     783 ..     749     808 .. 0.84
   3 ?    1.1   0.1      0.11     4e+02      53      79 ..     908     934 ..     905     938 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00048
    SCAPER_N  15 WafLfdnLkravdeiYqtcesdesvveCkevilvL 49 
                  afL       +d +Yq ++ d s v C e++l+ 
  EPX70586.1 500 NAFLARRFSAQIDRLYQRIDLDRSFVHCYEIMLTQ 534
                 57888899999*******************99875 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.084
    SCAPER_N  20 dnLkravdeiYqtcesdesvveCkevilvLd 50 
                  +L+  v++  +t es+++v+e +  ++  +
  EPX70586.1 753 HDLQERVNQAINTGESNQNVQESQQNLVATE 783
                 679999****************998777655 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.11
    SCAPER_N  53 lrdfeaLierlrlkkdyekadkkqrpt 79 
                 + df + +er+rl+++ e++d  + p 
  EPX70586.1 908 ISDFVNKVERFRLEEENEEEDMGEAPD 934
                 57999*************999888775 PP

>> FliG_N  FliG N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.0    0.0015       5.5      16      76 ..     301     361 ..     297     369 .. 0.89
   2 ?    3.1   0.0     0.039   1.4e+02      18      50 ..     574     606 ..     570     630 .. 0.86
   3 ?   -1.1   0.0      0.75   2.7e+03      53      84 ..     858     892 ..     851     902 .. 0.74

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0015
                 XHHHHHHHHTTSXHHHHHHHHHHHHCHTTXXHHHHHHHHHHHHHHHHCCCCHHCHHHHHHH CS
      FliG_N  16 geeeaaevlkhLdeeeiekltkeiaslksvskeeveaVleefleeleaqeylseggeeyar 76 
                  +e a + +++ +++ ++++t +i+sl+ v  +  e++++ f++ ++++ ++ e+  ++  
  EPX70586.1 301 TQEVANRYFSNSKDRSMQDITSSISSLRVVITSYQEQLFQIFNALIRTSPEIRENVLDFLA 361
                 689999999*************************************999998888777765 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.039
                 HHHHHHHTTSXHHHHHHHHHHHHCHTTXXHHHH CS
      FliG_N  18 eeaaevlkhLdeeeiekltkeiaslksvskeev 50 
                 e+a e++k+L+e  ie++t+ + sl + s++++
  EPX70586.1 574 ETAPELFKNLPEYFIEAITEYVLSLFKTSSSTL 606
                 7899******************99988888765 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 0.75
                 HHHHHHHHHHCC...CCHHCHHHHHHHHHHHHHHS CS
      FliG_N  53 Vleefleeleaq...eylseggeeyarelLekalg 84 
                 +l+ +l+ +++    e+++++g +y +e+  +alg
  EPX70586.1 858 ILDVYLNLCNEDnfvEAVAHDGRSYSKEIFDRALG 892
                 555555556555455778999*************9 PP

>> Bromo_TP_like  Histone-fold protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.1     0.056     2e+02      40     114 ..      90     165 ..      68     168 .. 0.79
   2 ?   -2.9   0.1         2   7.2e+03      72     103 ..     354     389 ..     326     396 .. 0.63
   3 ?    9.3   0.0   0.00034       1.2      20      81 ..     573     644 ..     571     650 .. 0.89

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.056
  Bromo_TP_like  40 lkikkevdkdlleei.likllleeslgedsYkrnELlsFLkyqlnlkkqlktkeaveedeslleiLkvlpknhlle 114
                    l+i  e +++    + + k  le+++ ++ ++++ + s L ++l+++   + k+ +++  s+ ++Lk lpk+ +l+
     EPX70586.1  90 LNITLELEQNERFYLeSFKRDLESEGHPCVFNEDNVDSALLTRLSVTGDNTFKYLLNSWSSVYNVLKRLPKDEHLQ 165
                    4555555555544444555557888899999999999999999****99999999***************998765 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2
  Bromo_TP_like  72 nELlsFLkyqlnlkkq...lkt.keaveedesllei 103
                    + +l FL + +n+ ++   l++ +  +++d  +l++
     EPX70586.1 354 ENVLDFLAMVVNVNHKrqsLQVdQFDITSDACMLNL 389
                    456777777777654311133313345666666655 PP

  == domain 3  score: 9.3 bits;  conditional E-value: 0.00034
  Bromo_TP_like  20 seqslniltdllkyyiekillkikk..........evdkdlleeilikllleeslgedsYkrnELlsFLkyq 81 
                    se + +++ +l +y+ie i++ +            +  +d+l e+ ++ll+++s+ ++ Y r  L++ L y 
     EPX70586.1 573 SETAPELFKNLPEYFIEAITEYVLSlfktssstltTHSSDTLCEFCVTLLTKSSYIKNPYLRAKLVEILFYG 644
                    56666788899999999999999999999999999999****************************988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1011 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       978  (0.0545485); expected 358.6 (0.02)
Passed bias filter:                      568  (0.0316805); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.78u 0.29s 00:00:01.07 Elapsed: 00:00:00.46
# Mc/sec: 6670.50
//
Query:       EPX70587.1  [L=200]
Description: rho family GTPase Rho5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.7e-56  188.6   0.0    6.8e-56  188.3   0.0    1.0  1  Ras         Ras family
    1.3e-21   77.0   0.0    2.1e-21   76.4   0.0    1.3  1  Roc         Ras of Complex, Roc, domain of DAPkinase
    4.5e-05   23.0   0.0    6.3e-05   22.5   0.0    1.3  1  Arf         ADP-ribosylation factor family
  ------ inclusion threshold ------
      0.039   13.4   0.0      0.052   13.0   0.0    1.3  1  SRPRB       Signal recognition particle receptor beta subunit
       0.13   12.0   0.0       0.29   10.9   0.0    1.5  1  Sigma70_r2  Sigma-70 region 2


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.3   0.0   1.9e-59   6.8e-56       1     159 [.       8     178 ..       8     181 .. 0.98

  Alignments for each domain:
  == domain 1  score: 188.3 bits;  conditional E-value: 1.9e-59
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHH.HHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvk.kwveeik 98 
                 Klv+vGd+a+GKt+ll+ f k++F+e y +T+ +++y+++++vdg++++l +wDTAGqe++++lr+l+y d++++l++++i+  es++nv+ kw++e+ 
  EPX70587.1   8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTV-FENYVADVNVDGRHIELALWDTAGQEDYDRLRPLSYPDSHVVLICFSIDAPESLDNVQeKWISEVL 105
                 9*******************************.**********************************************************9******* PP

                 HHSTTTSEEEEEEETTTGGG............G-SS-HHHHHHHHHHHT.SEEEEEBTTTTCTHHHHHHHHHHH CS
         Ras  99 rvaeenvpivLvGnKvDlee............kravsteegeelakelg.lkfletSAktnenveeafeellre 159
                 + ++ ++pi+LvG K Dl++            ++ + +e+ge++ak++g +k+le+SAk n +v+e+fe+++r+
  EPX70587.1 106 HFCS-SLPIILVGCKNDLRNdpkvieelsktsQKPIPYEDGETVAKKIGaYKYLECSAKLNDGVQEVFETAARA 178
                 ****.6*******************************************99*******************9986 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.4   0.0   5.9e-25   2.1e-21       1     119 [.       8     121 ..       8     122 .. 0.88

  Alignments for each domain:
  == domain 1  score: 76.4 bits;  conditional E-value: 5.9e-25
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE...GHHHHCH. CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd...srssenl. 95 
                 K+v+vGd++ GKt+ll  f +++f e + +t+  +++   v +++g       ++++l++WDtaGqe+++ l+pl + +++++++++     +s +n+ 
  EPX70587.1   8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVAD-V-NVDG-------RHIELALWDTAGQEDYDRLRPLSYPDSHVVLICFSidaPESLDNVq 97 
                 99*****************************99888764.4.4444.......689*****************************99754444556663 PP

                 HHHHHHHHHHCSSS-EEEEEE-TT CS
         Roc  96 keWlkelkkvagkspvilvgnkiD 119
                 ++W++e+ + +++ p+ilvg k D
  EPX70587.1  98 EKWISEVLHFCSSLPIILVGCKND 121
                 68********************99 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   1.7e-08   6.3e-05      15     135 ..       7     130 ..       1     178 [. 0.68

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 1.7e-08
                 EEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSSEE.EEEEEE..TTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHH.HHHHC CS
         Arf  15 lrilllGLDnaGKtTilkklkleelvt.tvPTigfn.veelei..knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakee.Lkall 108
                  +++++G  + GKt +l  ++++ + +  vPT+  n v ++++  +++++ +wD  Gqe   +l    +++ ++v+ +      e l++ +e+ ++++l
  EPX70587.1   7 RKLVIVGDGACGKTCLLIVFSKGTFPEvYVPTVFENyVADVNVdgRHIELALWDTAGQEDYDRLRPLSYPDSHVVLICFSIDAPESLDNVQEKwISEVL 105
                 689****999**************988589**988746666665589***********99888877777777776655555556667777665245555 PP

                 TSGCCTTSEEEEEEE-TTSTTSS-HHH CS
         Arf 109 eeeelkevallvlaNKqDlpealseee 135
                 +    ++ ++++++ K Dl+++ +  e
  EPX70587.1 106 H--FCSSLPIILVGCKNDLRNDPKVIE 130
                 4..356778888888888887755433 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   1.4e-05     0.052       3      85 ..       6      89 ..       4     130 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.4e-05
                --EEEEE-STTSSHHHHHHHHHHSS---B---S..S-EEETTG...GGTT-SEEEETT-GCC.SHHHHHHHHHHGGEEEEEEEEET CS
       SRPRB  3 kpavllvGlsdsGKTslftrLttdsvkktvtSq..essaalkvksekgskltliDfPGhekl.rqklleklkaksslkglvfvvDS 85
                ++++++vG   +GKT l+   +++++ + ++    e+ +a+   + ++ +l+l D  G+e   r + l +    s++  + f +D+
  EPX70587.1  6 RRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTvfENYVADVNVDGRHIELALWDTAGQEDYdRLRPLSY--PDSHVVLICFSIDA 89
                67899*******************9999988766577776666677888899999999986522222222..34445556666664 PP

>> Sigma70_r2  Sigma-70 region 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   8.1e-05      0.29      13      37 ..     154     178 ..     153     191 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 8.1e-05
                 HHHCT-THHHHHHHHHHHHHHHHHH CS
  Sigma70_r2  13 arrllgsgadaeDlvQeaflrlwra 37 
                 a+++l ++a   D vQe+f  + ra
  EPX70587.1 154 AYKYLECSAKLNDGVQEVFETAARA 178
                 89*****************999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       485  (0.0270511); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1453.07
//
Query:       EPX70588.1  [L=442]
Description: ICE2 family ER membrane protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.3e-79  266.2  36.1    8.4e-79  265.6  36.1    1.2  1  ICE2      ICE2


Domain annotation for each model (and alignments):
>> ICE2  ICE2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  265.6  36.1   4.7e-83   8.4e-79       3     405 ..      63     424 ..      62     425 .. 0.91

  Alignments for each domain:
  == domain 1  score: 265.6 bits;  conditional E-value: 4.7e-83
        ICE2   3 llstlyLllvvltiPlafdvGGlecGLafsltlfllYfvlttlkllarrssrlrllasllyylqhlvipsLLilfLsrfsedaskveetllevkslsey 101
                 +ls+ ++l++++ + +afdvGG+ cGL  +l+l +++  ++ lkl+  r+     +a +l +l+ l++  LLi++L+   +               ++ 
  EPX70588.1  63 FLSLSFFLVIIVLVGIAFDVGGKFCGLVLTLALEAYFCSVAFLKLFGLRK-----FAVILHFLEPLLVLQLLIIVLNISPSL--------E-----QNK 143
                 578999999************************************99888.....888999999************988221........1.....234 PP

        ICE2 102 leklvvkpWkklLsnstpvftllEGfcslLvIQaigqitrwlvnrkrsdswlilllvlsgsvitsalYfLyriyvfpeisvvdasllGvtltlvvflgl 200
                 + ++v+++W+++L ++tp+f+llEG++slLvIQa+g++ rwlv++k s+ w++++l+ ++svi+ +lY Lyr+ +f +is+ +a ++G++l+ v+++++
  EPX70588.1 144 IANYVIHAWNVILLHCTPLFNLLEGLASLLVIQALGHLGRWLVHYK-SENWMFFILLNASSVISMSLYLLYRVSSF-TISNCNAVMIGFSLAAVTVVSI 240
                 57899*****************************************.**************************997.7********************* PP

        ICE2 201 yGivsgkGsviEsSLlfaYivlciYeifpdlsesateellellkettqneqkelpklppiilasiskllkslssslpsslkeileflkaaietitpsvl 299
                 yG+ sg++s+ E+SL+f+Yi + +Y +++d+ + +          t +++++++  lpp +l+s+ +ll+s+ss +p++l++i  f++aai+t++psv+
  EPX70588.1 241 YGVSSGRASLSEASLMFSYIAYTVYMVCTDFGNPT----------TISTQKPNFDYLPPDVLQSVHHLLSSISSIFPKTLSNIALFMVAAIKTVAPSVF 329
                 ******************************98876..........4567899*********************************************** PP

        ICE2 300 isLayRilvfYaatrIiPalresgaralsqpeledsekaskilkllylyspciliavYthLllqysgelkkelklwglesivveswkfwnWvnifltll 398
                   +ayRi+v+Ya trI+Pa++++  +       e s+++++   l ++ spciliavYt+Lllq+   + +  +l   ++ +  s ++w+Wv  +lt++
  EPX70588.1 330 ATFAYRITVMYAVTRILPAIQQNIIYL------EYSRTTKQS--LWTVISPCILIAVYTNLLLQHLYPAPSFSSL---TNQILCSAEIWRWVSAILTII 417
                 *********************988772......334444444..445669***************9998887655...445788999************ PP

        ICE2 399 lYavELi 405
                 lYavEL 
  EPX70588.1 418 LYAVELA 424
                 *****96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (442 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       755  (0.0421105); expected 358.6 (0.02)
Passed bias filter:                      280  (0.0156172); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 3181.40
//
Query:       EPX70589.1  [L=143]
Description: 40S ribosomal protein S23 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-49  166.7   0.8    1.4e-49  166.5   0.8    1.1  1  Ribosom_S12_S23  Ribosomal protein S12/S23


Domain annotation for each model (and alignments):
>> Ribosom_S12_S23  Ribosomal protein S12/S23
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.5   0.8   7.8e-54   1.4e-49       2     114 .]      30     142 ..      29     142 .. 0.98

  Alignments for each domain:
  == domain 1  score: 166.5 bits;  conditional E-value: 7.8e-54
                      -------S-TSSTTSSEEEEEEEEEEEE---TT--S-EEEEEEEET.TSEEEEEEE-SSS..----TT-EEEEEE--.....BTTSTTEEEEBE CS
  Ribosom_S12_S23   2 kelrkktksdalegapqkrGvvlekvtveakkPnsAlRkvvrvrLikngkevtafipgegalnfldEhdevlvrGirrkgkavkDlpGvrykvv 95 
                      + l+++ ks+++ g+++++G+v+ek++veak+PnsA+Rk+vrv+Likngk+vtaf+p++g+lnf+dE+devl+ G++rkgka++D+pGvr+kvv
       EPX70589.1  30 RLLGTAFKSSPFGGSSHAKGIVVEKIGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLSGFGRKGKAKGDIPGVRFKVV 123
                      678899**************************************************************************************** PP

                      TS---TSSSTTTTT----T CS
  Ribosom_S12_S23  96 kvagvslkalskykkekpk 114
                      kvagv l al+++kkekp+
       EPX70589.1 124 KVAGVGLAALFHEKKEKPR 142
                      *****************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       359  (0.0200234); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.29s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 1008.21
//
Query:       EPX70590.1  [L=609]
Description: U3 snoRNP-associated protein Mpp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.4e-137  459.8  60.4   1.7e-137  459.5  60.4    1.0  1  Mpp10     Mpp10 protein


Domain annotation for each model (and alignments):
>> Mpp10  Mpp10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  459.5  60.4  9.7e-142  1.7e-137       5     605 ..      10     604 ..       7     608 .. 0.77

  Alignments for each domain:
  == domain 1  score: 459.5 bits;  conditional E-value: 9.7e-142
       Mpp10   5 kpeefLssqeelaekitslvkelydlvkkeekkssekkkspLeelvvegfDeeqiWqqlelqneavleell.kkiskllakkeklklldeeeeeesees 102
                 +p+ fL ++e+ ++++ + +  +++ vk  +       +sp+++++++++D++q+++ql++ ++ +l+el   +i++   ++   +++++e+ +++++ 
  EPX70590.1  10 EPTAFLFPDEKASNQLVEEAIGYFSAVKLPS-------SSPIQKIITKNLDAWQVYNQLAIAAKYTLDELPdLDIEEESPSD--GESYASENPQDENQL 99 
                 6999***********************9776.......568*****************************943444444333..334444444444444 PP

       Mpp10 103 eeeeeeeeeeeeeeeeeeeeeeeeeeekeeseekeeeeesekeee.....eededeeeeieeeekkskkkkkkkkkksvv...ddkFFkldemekflek 193
                 e ++ e+ +e ee+e++e            s+++ eee +++ee+     e+ e +++e+eee+++  +   +++ k+++   +dkFF++de++k++ +
  EPX70590.1 100 EVSSPENPAEGEENEDDEF--------LGFSDREGEEEGHSDEENiededEDMEADNFEVEEEDEQIPE---DQEPKKDAfglNDKFFDIDEFNKQTVA 187
                 4555555444444433333........333333333333333333000004444444444444444444...45566666678**************** PP

       Mpp10 194 eekkeerkk..eeeeddeeidyfedlssddedeeekksaedlkYeDFFdkpeekkkkkkkkkdeeeadeeeedeeee..eeeeeeeeeeeeeedleeed 288
                  e+++ +++    +e+d++id+f d+++ dedee   +a+++ YeDFF+++++k +++ kkk++++a+++++++ ++  e ee++ee+ee e+d++  d
  EPX70590.1 188 LEEQDAEQNreIGDEEDDDIDLFVDPED-DEDEEGGPRADSVLYEDFFGPRSAKGRREVKKKNKRDAEAKKKTKTKRvaEPEESDEEDEEPENDENTFD 285
                 99988777666899***********766.9999999*****************5555555555555555555444444422222222222233322222 PP

       Mpp10 289 eeeeeeeeeedeeekeekkkveeekeeeeekSsfekrqeklqekIkkLEeealaeKpWqLkGEvtAkdRPenSLLeedleFdrtarpaPviTeettetL 387
                    ++   +e+         +ee++ +++ +Ss+e+ +++++++Ik+LE e++a+K+W++ GE+t+k+RP+nSLL+ dl+F+++a+p+Pv Teett +L
  EPX70590.1 286 RVRKDLFADEE---------EEEHEGSQQLLSSYERDKARISQQIKDLETENVAKKSWTMAGEATSKSRPSNSLLDVDLDFETGAKPVPVQTEETTSEL 375
                 22222222222.........2234567899********************************************************************* PP

       Mpp10 388 EdiIkqRIkdkafDDveRkvkpkeeekeykkrleldqeKskeSLAeiYEkeYlkqte...nkqekeeeekkeHeeIkklmksLflkLDALsnfhFtPkp 483
                 Ed+Ik+RI +k+f+Dv+Rk  ++  e++ ++ +eld++K+++SLA+iYE++Y+k+++    +++++++++++HeeIk l+++++++LDALs++h++P p
  EPX70590.1 376 EDLIKNRIINKNFNDVPRKAPSSLPEFRPSELFELDENKPQQSLADIYEEQYMKKANpdnYQSAADKKTQNDHEEIKALFEDVSYTLDALSSWHYIPAP 474
                 *********************************************************9998999*********************************** PP

       Mpp10 484 akpevkivsnlpaismEEvapvavSdasllAPeEvkk...........kkkgdvkskeErtktdkkreRrkkKrkkrkklkekeeeqklkeklkpekkk 571
                 a+ +v++vsn+p+++mEE++p+a+Sda++lAP+Ev++            ++g ++sk+E+++t+k+ +Rr+ +rk+ +++k+ +e+++  +k     ++
  EPX70590.1 475 AEANVQVVSNAPTLAMEEAQPTASSDAMALAPQEVYQpsvdnrqgetiERSGIAISKAEMDHTEKQARRRRVRRKHAERRKALGEKRRGSDK-----EQ 568
                 ***********************************************9777**********************************3333332.....33 PP

       Mpp10 572 ekkeekakklkkltkaknvtvikeegkk..kalkss 605
                   ++ ++++++ +  +++ ++i +++k+   a++ss
  EPX70590.1 569 VVRQLSRADVQVIGAGGERKKISSQSKSkpAAVQSS 604
                 467777777777777777777766666655556666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (609 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1844  (0.10285); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        73  (0.00407162); expected 17.9 (0.001)
Passed Fwd filter:                        28  (0.00156172); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.90u 0.33s 00:00:01.23 Elapsed: 00:00:00.50
# Mc/sec: 3628.50
//
Query:       EPX70591.1  [L=396]
Description: DNA kinase/phosphatase Pnk1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.3e-51  172.5   0.0      1e-50  171.6   0.0    1.5  1  PNK3P         Polynucleotide kinase 3 phosphatase
    1.2e-20   74.1   0.1    3.6e-18   66.1   0.1    2.6  2  AAA_33        AAA domain
    2.2e-06   27.3   0.5     0.0058   16.1   0.2    2.3  2  KTI12         Chromatin associated protein KTI12
     0.0013   18.1   0.1       0.77    9.0   0.0    2.3  2  Zeta_toxin    Zeta toxin
     0.0025   17.9   0.0      0.021   14.9   0.0    2.2  2  Hydrolase_6   Haloacid dehalogenase-like hydrolase
      0.009   15.3   0.2       0.83    8.9   0.0    2.2  2  6PF2K         6-phosphofructo-2-kinase
  ------ inclusion threshold ------
      0.032   14.8   0.1       0.24   11.9   0.1    2.2  1  AAA_18        AAA domain
      0.051   13.7   0.0       0.11   12.6   0.0    1.6  1  MMR_HSR1      50S ribosome-binding GTPase
      0.059   12.8   0.0       0.14   11.6   0.0    1.6  2  LNS2          LNS2 (Lipin/Ned1/Smp2)
      0.087   13.2   0.1        2.3    8.7   0.0    2.4  2  IMPa_helical  Immunomodulating metalloprotease helical domain
       0.11   12.8   0.0         21    5.3   0.0    2.6  3  Hydrolase     haloacid dehalogenase-like hydrolase
       0.11   12.9   0.4        5.1    7.5   0.1    2.4  2  AAA_17        AAA domain
       0.11   12.8   0.0       0.21   11.9   0.0    1.5  1  AAA_16        AAA ATPase domain


Domain annotation for each model (and alignments):
>> PNK3P  Polynucleotide kinase 3 phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  171.6   0.0   7.5e-54     1e-50       1     162 []      57     208 ..      57     208 .. 0.99

  Alignments for each domain:
  == domain 1  score: 171.6 bits;  conditional E-value: 7.5e-54
       PNK3P   1 kiaaFDlDstliktksgkefakdaddwkllsesvlekLkklkeegykivifsNqggvvekktkkslekfkekieallkeldvpllvyaatkkdkyRKPe 99 
                 kia+FDlD+tliktksg++fakd  dw +++++v+ +L+kl++egy+i+ifsNq+g+ +  +++  ++f+ k++a+l++ld+p+++yaa+ +dkyRKP 
  EPX70591.1  57 KIATFDLDGTLIKTKSGRVFAKDGGDWLWWHPNVVPTLRKLDSEGYSIIIFSNQNGIPR--RASIGQQFQIKVQAILESLDLPVILYAALLRDKYRKPL 153
                 79*********************************************************..899999******************************** PP

       PNK3P 100 tGmweelkkdleekleidkeksfyvGDaagrklkkkkkkdfsdsDkkfAenvgikFktPeefF 162
                 +Gmw+++ ++ ++  +idk+  f+vGDaagr      +++++++D+kfAen+gikF tPe +F
  EPX70591.1 154 QGMWDHFVERWDH--PIDKSCAFFVGDAAGR------PRNHNSTDLKFAENIGIKFDTPEHYF 208
                 ***********99..****************......*************************9 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0         7   9.6e+03      68      97 ..     133     166 ..     122     172 .. 0.65
   2 !   66.1   0.1   2.6e-21   3.6e-18       1     143 []     246     367 ..     246     367 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 7
      AAA_33  68 sagrnvildatnlsrrer....arflklarrlgv 97 
                 s   +vil a +l+ + r      ++++++r++ 
  EPX70591.1 133 SLDLPVILYAALLRDKYRkplqGMWDHFVERWDH 166
                 5556788888888877773333355555555555 PP

  == domain 2  score: 66.1 bits;  conditional E-value: 2.6e-21
      AAA_33   1 lvllvGlpGsGKstlaerllkklgavllssdtlrrrlfgtdqqsktdytrvldrlyqilnelarkalsagrnvildatnlsrrerarflklarrlgvpv 99 
                 +v+lvG p+sGKstl ++ + + g++++++dtl++r +                   ++ + a +al+ +++v++d+tn + ++r+++++la+r++ p 
  EPX70591.1 246 IVVLVGYPASGKSTLCQNQIVPCGYERINQDTLKTRAR-------------------CI-KAAVEALENKKSVVVDNTNPTIEAREAWVELAKRFNIPA 324
                 599*****************************999987...................67.66779********************************** PP

      AAA_33 100 rivvvetdeetlkeRlakRaangddrsevpeealdrqkarferp 143
                 r+v+ve++e ++k+++  R+ +++    +pe a   +++rf+ p
  EPX70591.1 325 RCVYVEVPELLAKHNNTFRYIQQEI-KGLPEVAYTSFRSRFQKP 367
                 ********************98664.589999999999998876 PP

>> KTI12  Chromatin associated protein KTI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.0   0.00053      0.74       3      19 ..     246     262 ..     245     266 .. 0.89
   2 !   16.1   0.2   4.2e-06    0.0058      54     143 ..     278     370 ..     269     375 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00053
                 EEEEE--TTSSHHHHHH CS
       KTI12   3 LvvltGlPssGKstrak 19 
                 +vvl G+P+sGKst+ +
  EPX70591.1 246 IVVLVGYPASGKSTLCQ 262
                 59************876 PP

  == domain 2  score: 16.1 bits;  conditional E-value: 4.2e-06
                 HHHHHHHHHHHHHHHTT.SEEEE-S---SHHHHHHHHHHHHHTT-EEEEEEEE--HHHHHHHH...HHTT-S..S-HHHHHHHHHH---TTSS CS
       KTI12  54 kalRsslrsavkrdLskekvVIvDslnyikgfRYeLyciakaakttlcvvyvvapldvlvkwn...eereekeeyekelldaLiqRyeePdsk 143
                  ++R++ ++a+ ++L+++k V+vD++n +   R     +ak  +++   vyv +p+  + + n     ++e ++ ++  + +  +R+ +P +k
  EPX70591.1 278 LKTRARCIKAAVEALENKKSVVVDNTNPTIEAREAWVELAKRFNIPARCVYVEVPELLAKHNNtfrYIQQEIKGLPEVAYTSFRSRFQKPTTK 370
                 47899999999********************************************555555444435556666799999**********9987 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.0   0.00056      0.77      12      56 ..     240     280 ..     229     289 .. 0.79
   2 !    6.9   0.0    0.0025       3.5      88     148 ..     288     349 ..     284     379 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00056
  Zeta_toxin  12 sqerPklillgGqpGAGKselaellkdelerqgnvvrldpDdlRe 56 
                 + e+  +++l+G p++GKs+l +          ++ r+++D+l++
  EPX70591.1 240 PAEHQEIVVLVGYPASGKSTLCQNQIVPC----GYERINQDTLKT 280
                 5577889**************98877776....566777777776 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0025
  Zeta_toxin  88 lqeaiengyniivegtlrspdvvkklaealkkaGYevevvvvavkkelSrlgvldRyeee.v 148
                   ea+en+ +++v+ t  +++  +  +e +k  +   + v+v v++ l+ +    Ry ++ +
  EPX70591.1 288 AVEALENKKSVVVDNTNPTIEAREAWVELAKRFNIPARCVYVEVPELLAKHNNTFRYIQQeI 349
                 5689****************************9999999999999******99999999842 PP

>> Hydrolase_6  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   1.5e-05     0.021       3      77 ..      61     148 ..      59     182 .. 0.78
   2 ?    0.1   0.0      0.63   8.6e+02      18      58 ..     287     324 ..     276     372 .. 0.71

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.5e-05
                  EESTTTSE..........ETTE...E-TTHHHHHHHHHHTT-EEEEEE---SS-HHHHHHHHHHTT----GGGEEEHHHHHHHHHHHH CS
  Hydrolase_6   3 fDidGvLw..........rgdk...aipgaaealnalraagkpvvllTNnsskseeeyakkleklgvditeeqvvtsataaaeylkkr 77 
                  fD+dG+L+          +g++     p+++ +l+ l ++g+ +++++N+++ ++++ + +  ++ v++  e +  +    a++l+++
   EPX70591.1  61 FDLDGTLIktksgrvfakDGGDwlwWHPNVVPTLRKLDSEGYSIIIFSNQNGIPRRASIGQQFQIKVQAILESLDLPVILYAALLRDK 148
                  9*******7777777777466622247***************************9998888777777766666666666666666664 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.63
                  THHHHHHHHHHTT-EEEEEE---SS-HHHHHHHHHHTT--- CS
  Hydrolase_6  18 gaaealnalraagkpvvllTNnsskseeeyakkleklgvdi 58 
                      a++al++++  vv  TN + + +e+ ++  +++++++
   EPX70591.1 287 A---AVEALENKKSVVVDNTNPTIEAREAWVELAKRFNIPA 324
                  3...4555566666666678888888888888778888775 PP

>> 6PF2K  6-phosphofructo-2-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.0    0.0006      0.83      13      31 ..     244     262 ..     236     268 .. 0.84
   2 ?    3.9   0.1     0.021        29      70     130 ..     274     330 ..     269     332 .. 0.69

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0006
                 -EEEEEESSTTSSHHHHHH CS
       6PF2K  13 klvivlvGLpargKtyisk 31 
                 + ++vlvG pa gK+++ +
  EPX70591.1 244 QEIVVLVGYPASGKSTLCQ 262
                 5689***********9876 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.021
                 -HHHHHHHHHHHHHHHHHHHHHHHTS--SEEEEES---SHHHHHHHHHHHHHTT..-EEEEEE CS
       6PF2K  70 neealklreklalaalkdllaylneeegqvaifDAtNttrerRklilefveenn..lkvlfle 130
                 n++ lk r+++ +aa++ l    ++++ +  + D tN t+e R+  +e ++++n   +++++e
  EPX70591.1 274 NQDTLKTRARCIKAAVEAL----ENKK-S-VVVDNTNPTIEAREAWVELAKRFNipARCVYVE 330
                 5566666666655555544....3333.2.467*****************9999665677766 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   0.00018      0.24       1      17 [.     247     263 ..     247     338 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00018
      AAA_18   1 IlltGtpGvGKttlake 17 
                 ++l G+p++GK+tl+++
  EPX70591.1 247 VVLVGYPASGKSTLCQN 263
                 789************96 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0     8e-05      0.11       2      52 ..     247     301 ..     246     352 .. 0.64

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 8e-05
                 EEEEESTTSSHHHHHHHHH.TS.TEEESSSTTSSSSE.EEEEEE.ETTEEEEEEE CS
    MMR_HSR1   2 vaivGrpNvGKStLinalt.ge.kaivsdkpgtTrdi.negrvk.lkgkeielvD 52 
                 v++vG+p +GKStL +  +      ++++   +Tr   +++ v+ l++k+ ++vD
  EPX70591.1 247 VVLVGYPASGKSTLCQNQIvPCgYERINQDTLKTRARcIKAAVEaLENKKSVVVD 301
                 89************95543132333333333444443244444443445555555 PP

>> LNS2  LNS2 (Lipin/Ned1/Smp2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0    0.0001      0.14      45     100 ..      54     110 ..      32     146 .. 0.82
   2 ?   -2.9   0.0       2.8   3.9e+03      33      64 ..     282     313 ..     274     324 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.0001
        LNS2  45 sddkivisdidgtitksdvlGhilpllgkdw..thkgvaklyskikengYkilylsar 100
                 +++ki   d+dgt+ k    G+++   g dw   h +v+   +k+ ++gY i+  s++
  EPX70591.1  54 KSSKIATFDLDGTLIKTK-SGRVFAKDGGDWlwWHPNVVPTLRKLDSEGYSIIIFSNQ 110
                 56899999******9986.699999999996336******************999875 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2.8
        LNS2  33 taeveakiylwksddkivisdidgtitksdvl 64 
                  ++++a +   ++++ +v+ + + ti   +++
  EPX70591.1 282 ARCIKAAVEALENKKSVVVDNTNPTIEAREAW 313
                 45678888888999999999999999777665 PP

>> IMPa_helical  Immunomodulating metalloprotease helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0      0.21   2.9e+02      50      80 ..     123     153 ..     110     170 .. 0.83
   2 ?    8.7   0.0    0.0017       2.3      17      65 ..     259     307 ..     253     322 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.21
                   HHHTT--GGGSSS-HHHHHHHHHHHHHHHH- CS
  IMPa_helical  50 ldsskidlfaeegyrlekllvLlaDkyRqei 80 
                   ++ + + ++++ +  +   ++Ll DkyR+ +
    EPX70591.1 123 FQIKVQAILESLDLPVILYAALLRDKYRKPL 153
                   555667778888888888999*******865 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0017
                   GG-EEETEE-TTSTTH.HHHHHHHHHHHHHHHHHHHTT--GGGSSS-HH CS
  IMPa_helical  17 skCdsnvksCdeeaklkeefkkaaesirsalealdsskidlfaeegyrl 65 
                   + C+++++ C  e   ++++k++a+ i++a+eal+++k  + ++++ ++
    EPX70591.1 259 TLCQNQIVPCGYERINQDTLKTRARCIKAAVEALENKKSVVVDNTNPTI 307
                   67***99****9999999********************99999886554 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.1     0.025        35       2      16 ..      57      71 ..      56      78 .. 0.82
   2 ?    5.3   0.0     0.015        21     121     198 ..      88     178 ..      86     180 .. 0.74
   3 ?   -3.1   0.0       5.6   7.7e+03     179     195 ..     285     299 ..     272     329 .. 0.60

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.025
                SEEEEESBTTTBCHH CS
                xxxxxxxxxxxxxxx RF
   Hydrolase  2 ktvvfDkdGTLttge 16
                k   fD+dGTL++++
  EPX70591.1 57 KIATFDLDGTLIKTK 71
                5678********876 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.015
                 TTHHHHHHHHHHTTEEEEEEESSEHHHHH.HHHHHTT...GGGESEEEEHHCES...........STTTSHHHHHHHHHHHT..STGGGEEEEES CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxx...xxxxxxxxxxxxxx...........xxxxxxxxxxxxxxxxx..xxxxxxxxxxx RF
   Hydrolase 121 peaaeavasLkaagievvlltgdnpetae.raanqlG...ddyfdaviasdiet...........vakpspegkvaaireLq..gkpeevamVGD 198
                 p ++ ++++L + g+ +++ +++n  + + ++ +q+    +    a+++s +               kp++ +  + +++    ++++   +VGD
  EPX70591.1  88 PNVVPTLRKLDSEGYSIIIFSNQNGIPRRaSIGQQFQikvQ----AILESLDLPvilyaallrdkYRKPLQGMWDHFVERWDhpIDKSCAFFVGD 178
                 77899***********************9888888884432....33333333344446667777888888888888888876677777888888 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 5.6
                 HHHHHHHHTSTGGGEEE CS
                 xxxxxxxxxxxxxxxxx RF
   Hydrolase 179 kvaaireLqgkpeevam 195
                  +aa++ L  k++  ++
  EPX70591.1 285 IKAAVEALENKKS--VV 299
                 4445555543332..22 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.1    0.0037       5.1       1      14 [.     250     263 ..     250     274 .. 0.83
   2 ?    3.3   0.0     0.072     1e+02      56     112 ..     279     333 ..     267     338 .. 0.62

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0037
                 EE-TTSSHHHHHHH CS
      AAA_17   1 lGgPGsGKgtqcek 14 
                 +G P sGK+t+c++
  EPX70591.1 250 VGYPASGKSTLCQN 263
                 79**********97 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.072
                 HHHHHHHHHHHHHH.HSSEEEEEE-SEEEETTEEEESSHHHHHHHH..SEEEEEE--H CS
      AAA_17  56 elqkeaaekiaeea.kkkgvlvdghprikeqagfldglpkevleelkpdaiilleadp 112
                 +++++ +++  e+  +kk v+vd    + e ++++ +l k +  ++ p  ++++e+++
  EPX70591.1 279 KTRARCIKAAVEALeNKKSVVVDNTNPTIEAREAWVELAKRF--NI-PARCVYVEVPE 333
                 333333333333323667799998866668899999988754..33.67899999876 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00015      0.21      21      42 ..     241     262 ..     233     351 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00015
      AAA_16  21 sgrpelvllsGesGvGKsslvr 42 
                 +   e+v+l+G++++GKs+l +
  EPX70591.1 241 AEHQEIVVLVGYPASGKSTLCQ 262
                 44459***************94 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (396 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       648  (0.0361426); expected 358.6 (0.02)
Passed bias filter:                      602  (0.0335769); expected 358.6 (0.02)
Passed Vit filter:                        87  (0.00485247); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.57u 0.28s 00:00:00.85 Elapsed: 00:00:00.45
# Mc/sec: 2671.08
//
Query:       EPX70592.1  [L=289]
Description: inorganic pyrophosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.7e-56  188.5   0.1      9e-56  188.1   0.1    1.2  1  Pyrophosphatase  Inorganic pyrophosphatase


Domain annotation for each model (and alignments):
>> Pyrophosphatase  Inorganic pyrophosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.1   0.1     5e-60     9e-56       1     160 []      47     229 ..      47     229 .. 0.97

  Alignments for each domain:
  == domain 1  score: 188.1 bits;  conditional E-value: 5e-60
                      EEEEE-TTCSEEEEEETTT...........TEEEEEEE-SSSB-BSSEEEEETT--BT.......CCBEETSSSEEEEEESSS---TTEEEEEE CS
  Pyrophosphatase   1 vvvEiprgsnaKyeidkee...........gklrldrvlftskgypanYGfipqTled.......telkGDgDPlDvlvlgeeplspgevvevk 76 
                      ++vEipr+s+ K+ei+k+            gklr++r++f+++gy++nYG++pqT+ed       t++kGD DPlDv+++ge++ ++g++++vk
       EPX70592.1  47 MIVEIPRWSQGKLEITKDAtlnpikqdtkkGKLRYVRNCFPHHGYIWNYGAFPQTFEDpnvvhpeTKAKGDSDPLDVCEIGEARGYSGQIKQVK 140
                      89*******************************************************************************9999********* PP

                      EEEEEEEEETTEEEEEEEEEETTSGGGTT-SSGGG....STHHHHHHHHHHHHHTTTTSCCT-SE.EEE.EEEEHHHHHHHHHHHHHHHH CS
  Pyrophosphatase  77 vlGvlamiDegetDdKiiavpvkdprlkkindied....lpgllleeiehfFetykdlegkkknv.kve.ewkdkeeAekvieeaheryk 160
                      vlGv+a++DegetD+K+i+++v+dp   k+ndied    +pgl+ ++++++F+ yk+++gk +n  +++ e+k+ ++Ae+v++e+ e+++
       EPX70592.1 141 VLGVMALLDEGETDWKVIVIDVNDPLAPKLNDIEDverhMPGLI-RATNEWFRIYKIPDGKPENSfAFSgECKNSKYAEEVVRECNEAWE 229
                      *************************779*******999888888.**************9966778*********************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       372  (0.0207485); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2099.79
//
Query:       EPX70593.1  [L=540]
Description: hydrolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.3e-51  172.5   7.1    1.3e-50  172.1   7.1    1.2  1  DUF2417        Region of unknown function (DUF2417)
      1e-07   32.8   0.1    2.3e-07   31.7   0.1    1.6  1  Abhydrolase_6  Alpha/beta hydrolase family
    0.00022   21.0   0.4    0.00035   20.3   0.4    1.3  1  Abhydrolase_1  alpha/beta hydrolase fold
     0.0023   17.2   0.0     0.0037   16.6   0.0    1.3  1  Hydrolase_4    Serine aminopeptidase, S33
  ------ inclusion threshold ------
      0.013   15.2   0.4      0.077   12.8   0.1    2.0  2  Abhydrolase_5  Alpha/beta hydrolase family
      0.078   12.7   0.0       0.12   12.0   0.0    1.3  1  Ail_Lom        Enterobacterial Ail/Lom protein
        0.2   11.9   0.0       0.45   10.8   0.0    1.5  1  DUF2175        Uncharacterized protein conserved in archaea (


Domain annotation for each model (and alignments):
>> DUF2417  Region of unknown function (DUF2417)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  172.1   7.1     5e-54   1.3e-50       1     236 []      18     250 ..      18     250 .. 0.95

  Alignments for each domain:
  == domain 1  score: 172.1 bits;  conditional E-value: 5e-54
     DUF2417   1 ErepLLpkqkkshrtigeessegylspddpavspynlwkvrnlrwilnilllinliwlvllLisdFvslpglnnrgsgFndlalillslianllnllff 99 
                 Er+ LLp+   sh+         ++ ++  a +p  +w    +r++++ ll+++l++++llLi++F+s+p+l++ ++gF+ + ++ ls++ ++++l f+
  EPX70593.1  18 ERSALLPRFLGSHQG------AIPQYSNSYALTPLFYW----IRSTSLSLLIFTLVVHFLLLINIFISIPILSHLSTGFTPIGFTALSALLLAMQLTFV 106
                 788999988777744......3334455667999*999....9******************************************************** PP

     DUF2417 100 glpSkldrvlnivlavLllvnllllllvkytReregfvgiasvlWaaltfllgilldryvekgkkeeeerltgreet.......rhtlkewlsilvrni 191
                 + p++++r+++ + a+Ll+v++ll++l + +R+reg+ gi++v+Wa+l++l+ ++ d +++++ kee++++++ + +        ++++ +  +++++i
  EPX70593.1 107 YSPNAPERITQRINAFLLVVDVLLVVLSPILRHREGWRGIFFVFWAFLMSLWIVFSDEMLLRQYKEEHPEYASGSYEhstwsptTWPWRRFGNLTISMI 205
                 **********************************************************************99998888999999*************** PP

     DUF2417 192 ikllllvvlilltltllLralDaslespgkfywvdnhkyqlHlkC 236
                 ++++l+v++i+++ltl Lra+D +l +pgk+y+v ++k+++Hl+C
  EPX70593.1 206 FSIILTVLTIHTVLTLALRAYDGNLTAPGKLYTVTDSKAKIHLEC 250
                 ********************************************* PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.7   0.1   8.9e-11   2.3e-07       8     145 ..     287     442 ..     281     507 .. 0.68

  Alignments for each domain:
  == domain 1  score: 31.7 bits;  conditional E-value: 8.9e-11
                    C.....GCHHHHHHHHCCT.....CEEEEE--TTST..S-GGCS--HHHCHHH..HHHHCCTT..TTSEEEEEETCHHH....HHHHHHHCC...E CS
  Abhydrolase_6   8 gssassWlvapLaallaag.....vhvlapDlpGhG..rsdpppldledladl..aalldelaagggpvvlvGHSlGGa....lalaaapla.lvv 89 
                    gs+  +W  + + ++ +        +v + D+pG+G  ++ ++p +   ++dl  +al+++ +  +gp +lvGH  GG+     a++   ++  v 
     EPX70593.1 287 GSGELDWDPSVVNEKVGFNyippdTRVCVWDRPGMGwsDNIGSPSSIGMVEDLlgEALVQADV--HGPYILVGHGIGGVysnvFAAR---HLgEVK 377
                    555666732233222222222222455689******77778888999889*****99999996..9999*********965443333...556889 PP

                    E.EEES-.........----TTTS----TTHHHHHHTT-CCCCHCCH...S-HS..CCCCHHHCCCCHC CS
  Abhydrolase_6  90 g.vlldppp.......talpagllaaalelllallallrllawlsre...plpr..lfladedadaawr 145
                    g +l+d+ +       +++ +++l +++ +l +l+ ++ + + + ++   +  r  +f++ ++   +w+
     EPX70593.1 378 GmLLIDSGSvqslqrsGSFSTRFLLFIRGWLSPLGINRLFGTIFLGRdrkD--RvyGFYSWTS--DRWV 442
                    99*****55565444445555556666666666665555544443332333..2347777666..5554 PP

>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.4   1.4e-07   0.00035       5     106 ..     281     384 ..     278     412 .. 0.77

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 1.4e-07
                    EE-STTTCGGGGTTGHHHHHH.HHT....TSEEEEEEETTSTTSSSTTTGB.CHHSHHHHHHHHHHHHHHCTTSSEE.EEEETHHHHHHHHHHHHH CS
  Abhydrolase_1   5 ilhGlpgssdvwaerglapaL.akd....gfdvillDlrGvgySspapacinddygtasvaddldrildalgddklt.lvGhSmGGmialayaaey 94 
                    ++h  +gs+++ + +++++    ++    + +v++ D +G g+S+   ++  +  ++ +v+d l  +l + +++ ++ lvGh  GG  +  +aa++
     EPX70593.1 281 LHHTAGGSGELDWDPSVVNEKvGFNyippDTRVCVWDRPGMGWSDNIGSP--S--SIGMVEDLLGEALVQADVHGPYiLVGHGIGGVYSNVFAARH 372
                    78889999999777776654404448888999999999999999999998..4..45557777776655555555555****************** PP

                    GGGEEEEEEESE CS
  Abhydrolase_1  95 perVkalvllga 106
                       Vk++ l+++
     EPX70593.1 373 LGEVKGMLLIDS 384
                    999******999 PP

>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.4e-06    0.0037      32     107 ..     311     382 ..     307     448 .. 0.78

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.4e-06
  Hydrolase_4  32 favyalDhrGhGrsegkrghvpsfddyvdDlaafvekvkeehpelplfllGhSmGGliallyllrypdkvaglils 107
                    v+ +D  G G s+ +    ps   +v+Dl  + e++++   + p +l+Gh  GG+ +  +++r+  +v+g+ l+
   EPX70593.1 311 TRVCVWDRPGMGWSD-NI-GSPSSIGMVEDL--LGEALVQADVHGPYILVGHGIGGVYSNVFAARHLGEVKGMLLI 382
                  6799**********4.34.47899999***9..668899999999**************************99885 PP

>> Abhydrolase_5  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1     3e-05     0.077      58      89 ..     352     384 ..     335     398 .. 0.84
   2 ?   -0.1   0.0      0.28   7.1e+02     105     135 ..     474     507 ..     455     516 .. 0.63

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3e-05
  Abhydrolase_5  58 kfvvgGhslGGvvasrfaaee.ekiegvvflas 89 
                     +++ Gh +GGv +  faa++ ++++g++++ s
     EPX70593.1 352 PYILVGHGIGGVYSNVFAARHlGEVKGMLLIDS 384
                    5999*****************67******9877 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.28
  Abhydrolase_5 105 sivgteDg...vlnvkslekakkflpkdtkvvsi 135
                    si+++ ++   v n+++ +++  +l+++t    +
     EPX70593.1 474 SIITSGNSlknVKNWSEEQRELSKLTDNTVWDIV 507
                    5555555500055556666666666666655555 PP

>> Ail_Lom  Enterobacterial Ail/Lom protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   4.8e-05      0.12      83     192 ..     188     297 ..     175     306 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 4.8e-05
     Ail_Lom  83 sdtrwhedsvrnrwfsvmagpsvrvnewfsayalagvayarvssfagdyvrltddkrkkqevltrsddarrsntalaysagvqinptesvvvdlayeas 181
                 s t w      n  +s++    + v    +  +la  ay    +  g  +++td k k +    +s  +    t l  +  v + p ++ +++l + a 
  EPX70593.1 188 SPTTWPWRRFGNLTISMIFSIILTVLTIHTVLTLALRAYDGNLTAPGKLYTVTDSKAKIHLECFGSTTSPNRSTVLIEGGEVSVHPFKEWILNLHHTAG 286
                 556666666666667777777777777788889999999999999**********************999999**********************9999 PP

     Ail_Lom 182 grgdwrteafi 192
                 g+g+   +  +
  EPX70593.1 287 GSGELDWDPSV 297
                 99865544444 PP

>> DUF2175  Uncharacterized protein conserved in archaea (DUF2175)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00018      0.45      14      37 ..     233     257 ..     228     265 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00018
     DUF2175  14 egekFTft.kkgvvHyeClvekark 37 
                  g+++T+t +k+ +H+eC+ + ++ 
  EPX70593.1 233 PGKLYTVTdSKAKIHLECFGSTTSP 257
                 699****************988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (540 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       822  (0.0458475); expected 358.6 (0.02)
Passed bias filter:                      484  (0.0269954); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.59u 0.25s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 3999.96
//
Query:       EPX70594.1  [L=116]
Description: CCAAT-binding factor complex subunit Php3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.6e-28   98.8   0.5    2.2e-28   98.3   0.5    1.2  1  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a
    3.8e-07   30.5   1.6    4.4e-07   30.3   0.1    1.7  2  Histone        Core histone H2A/H2B/H3/H4
    0.00016   21.8   0.0     0.0002   21.5   0.0    1.3  1  CENP-T_C       Centromere kinetochore component CENP-T histon
     0.0017   18.3   0.1     0.0022   18.0   0.1    1.3  1  TFIID-18kDa    Transcription initiation factor IID, 18kD subu
  ------ inclusion threshold ------
      0.014   15.4   0.1      0.028   14.4   0.1    1.6  1  Bromo_TP       Bromodomain associated
      0.015   15.1   0.4      0.026   14.3   0.4    1.3  1  PAN_3          PAN-like domain
      0.037   14.5   0.4       0.18   12.3   0.1    1.9  2  TFIID_20kDa    Transcription initiation factor TFIID subunit 
       0.15   12.4   0.6        0.3   11.5   0.1    1.7  2  CENP-S         CENP-S protein


Domain annotation for each model (and alignments):
>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.3   0.5   9.6e-32   2.2e-28       3      65 .]      12      75 ..      10      75 .. 0.98

  Alignments for each domain:
  == domain 1  score: 98.3 bits;  conditional E-value: 9.6e-32
                   XXHHHHHHHHHCC.TTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHHH CS
  CBFD_NFYB_HMF  3 LPiarvkkImksd.pdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehiklAv 65
                   LPia+v++Imks+ p+++ki+k+Ak+++++cv+efi++++seA+e c++ekrKti++e+++lA+
     EPX70594.1 12 LPIANVARIMKSAlPENAKISKEAKDCVQDCVSEFISFITSEASEQCTQEKRKTITGEDVLLAM 75
                   9*************************************************************98 PP

>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.3   0.1   1.9e-10   4.4e-07      63     128 ..      13      75 ..       8      78 .. 0.88
   2 ?   -0.8   0.2      0.81   1.8e+03      29      42 ..      98     111 ..      85     116 .] 0.46

  Alignments for each domain:
  == domain 1  score: 30.3 bits;  conditional E-value: 1.9e-10
                 XHHHHHHHHHHHH.TTSSSXEEXHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTXSEEXHHHHHHHH CS
     Histone  63 qklpfaRvvreivksekedlrisaeavlalqealEallvelfeeAnllakhaKRvTitpkDiqlAr 128
                 + + +aR+++   +   e+ +is+ea +++q  +  ++  +++eA+  + + KR+Tit +D+ lA+
  EPX70594.1  13 PIANVARIMKSALP---ENAKISKEAKDCVQDCVSEFISFITSEASEQCTQEKRKTITGEDVLLAM 75 
                 44567777775555...8***********************************************9 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.81
                 S-SSSSB--TTT-X CS
     Histone  29 asskskkkkkrryr 42 
                 ++ + ++k+++++r
  EPX70594.1  98 QARSASMKESKQTR 111
                 22223333333333 PP

>> CENP-T_C  Centromere kinetochore component CENP-T histone fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   8.8e-08    0.0002       7      76 ..      11      77 ..       5     109 .. 0.86

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 8.8e-08
    CENP-T_C  7 slPaavvkklakrfakasgskaklekealkalekasdkffeqvgeDLeayakHagRKtidesDvilLmkr 76
                 lP a v ++ k++     ++ak++kea + ++ +  +f++ ++++        +RKti  +Dv+l m  
  EPX70594.1 11 LLPIANVARIMKSA---LPENAKISKEAKDCVQDCVSEFISFITSEASEQCTQEKRKTITGEDVLLAMNT 77
                47777777776666...4479********************************************99975 PP

>> TFIID-18kDa  Transcription initiation factor IID, 18kD subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.1   9.8e-07    0.0022      20      64 ..      31      75 ..      16     101 .. 0.89

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 9.8e-07
                 --HHHHHHHHHHHHHHHHHHHHHHHC-XXXX...XXXXXXXXXXX CS
  TFIID-18kDa 20 PlqetvqlledlvrgyliellqqaakvaklrgsrkitlEDllfli 64
                   +e+ ++++d v++++  ++ +a +   +++++ it ED+l ++
   EPX70594.1 31 ISKEAKDCVQDCVSEFISFITSEASEQCTQEKRKTITGEDVLLAM 75
                 568999***********************************9877 PP

>> Bromo_TP  Bromodomain associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.1   1.2e-05     0.028      28      75 ..      35      82 ..      14      85 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 1.2e-05
                HHHHHHHHHHHHHHHHHHHHHHHHTTSS-SS--HHHHHHHHHHTT--G CS
    Bromo_TP 28 aLEtLteiaqkYirelgeqaksfaehagRseptlkDvvltLqelginv 75
                a +  ++ + ++i+ ++ +a++ +  + R + t +Dv l+++ lg+++
  EPX70594.1 35 AKDCVQDCVSEFISFITSEASEQCTQEKRKTITGEDVLLAMNTLGFEN 82
                5567789999***********************************965 PP

>> PAN_3  PAN-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.4   1.2e-05     0.026      12      46 ..      25      59 ..      17      62 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.2e-05
       PAN_3 12 ystssttseswddCvqkCledstCilayknsenCt 46
                 +++ ++s++ +dCvq C ++   ++ ++ se+Ct
  EPX70594.1 25 LPENAKISKEAKDCVQDCVSEFISFITSEASEQCT 59
                6788999***************************7 PP

>> TFIID_20kDa  Transcription initiation factor TFIID subunit A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   8.1e-05      0.18      14      62 ..      27      75 ..      16      78 .. 0.92
   2 ?    0.3   0.0      0.46     1e+03      42      51 ..      89      98 ..      84     103 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 8.1e-05
                 SS----HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SEE-HHHHHHHH CS
  TFIID_20kDa 14 setkldedvedlLleiaddFvesvtkfacklakhRksdklevrDiqlhl 62
                  ++k+ ++ +d + + + +F++ +t+ a++   + k +++   D+ l +
   EPX70594.1 27 ENAKISKEAKDCVQDCVSEFISFITSEASEQCTQEKRKTITGEDVLLAM 75
                 5889*****************************************9976 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.46
                 HHHHHHTT-S CS
  TFIID_20kDa 42 cklakhRksd 51
                  +lak+R+ +
   EPX70594.1 89 ISLAKYREQQ 98
                 589****965 PP

>> CENP-S  CENP-S protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   0.00013       0.3      14      69 ..      20      74 ..      14      77 .. 0.82
   2 ?   -1.7   0.1       1.8     4e+03       8      29 ..      88     109 ..      84     110 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00013
      CENP-S 14 iveeeaaekeveatkqfiaaltelvykqlenlakDLeaFakHAkRstittdDvlLl 69
                i++  a+ ++ +++k++   + ++v + ++ +++     +   kR+tit +DvlL 
  EPX70594.1 20 IMKS-ALPENAKISKEAKDCVQDCVSEFISFITSEASEQCTQEKRKTITGEDVLLA 74
                5444.56778899999999999999999999999999999999***********97 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.8
      CENP-S   8 wysvgkiveeeaaekeveatkq 29 
                  +s++k  e++a + +++ +kq
  EPX70594.1  88 KISLAKYREQQARSASMKESKQ 109
                 5667778888888888888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       956  (0.0533214); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 843.93
//
Query:       EPX70595.1  [L=1019]
Description: cytoplasmic alanine-tRNA ligase Ala1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   1.2e-222  740.4   0.4   1.8e-222  739.7   0.0    1.4  2  tRNA-synt_2c  tRNA synthetases class II (A)
    9.6e-18   64.0   0.2    2.4e-17   62.8   0.2    1.7  1  tRNA_SAD      Threonyl and Alanyl tRNA synthetase second addi
    1.5e-13   51.4   3.3    2.8e-13   50.5   3.3    1.5  1  DHHA1         DHHA1 domain
  ------ inclusion threshold ------
      0.023   15.0   0.9       0.19   12.1   0.3    2.4  2  Prok-TraM     Prokaryotic Transcriptional repressor TraM


Domain annotation for each model (and alignments):
>> tRNA-synt_2c  tRNA synthetases class II (A)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  739.7   0.0  4.1e-226  1.8e-222       1     550 [.      74     656 ..      74     658 .. 0.95
   2 ?   -3.3   0.4      0.52   2.3e+03     404     447 ..     866     908 ..     852     947 .. 0.49

  Alignments for each domain:
  == domain 1  score: 739.7 bits;  conditional E-value: 4.1e-226
                   HHHHHHHHHHHCTT-EEE----SS-SSSTTCSS--SGGGGGHHHHTTSS....CGGSSSEEEEEEEEE-EETTEEGGGGTTTSSS--SEEEEEEEEE CS
  tRNA-synt_2c   1 eirekFldfFekkgHtvvksssvvpendptllfvnAgmaqfkpiflgke....akpklkravnsQkciRagGkhnDlenVGktarHhTfFeMlGnfs 93 
                   ++r++Fl+fFe++gHt+v+sssvvp +dp+llf+nAgm+qfkpiflg++    + +klkrav sQkciRagGkhnDle+VG++++HhT+FeMlGn+s
    EPX70595.1  74 KVRSTFLKFFEERGHTIVPSSSVVPYDDPSLLFANAGMNQFKPIFLGTVdpshEYSKLKRAVDSQKCIRAGGKHNDLEDVGRDNYHHTMFEMLGNWS 170
                   59***********************************************98888899**************************************** PP

                   SSSS-HHHHHHHHHHHHHTTTT--GGGEEEEEETTEH........HHHHHHHHTTTTEGGGEEEE-HHHHEEESSSSEEEEEEEEEEEECETTSHHC CS
  tRNA-synt_2c  94 fgdYfkeeaiefawelltkelgldkerlyvtvfeedd........eaveiweklvgvpeerilrfgekdnfwemgdtgpcgpcseiyydrgeeigkr 182
                   fgdYfk+eai++awellt+++gl+k++lyvt+f +++        ea+++w +++ +pe+r+l+ + kdnfwemgd+gpcgpcsei+ydr   ig+r
    EPX70595.1 171 FGDYFKKEAIQMAWELLTEVYGLEKDQLYVTYFGGHEesglgpdlEARQLWLDIG-IPESRVLPGDLKDNFWEMGDQGPCGPCSEIHYDR---IGNR 263
                   ************************************99****************6.**********************************...**** PP

                   HCCCCTTCTCCHEEEEEEEEEEEEEESTTSHEEEEEEEEEEEEEEHHHHHHHHTTHSSGGGSCCTHHHHHHHHHHHT-.-T......CSTCCHHHHH CS
  tRNA-synt_2c 183 kaaseveadddrvleiwnlvfmqfnreedgtlkpLpkksidtGmglerlvavLqevrsnydtdlfvpvieaieeisga.ty......edkdetdeal 272
                   +  + v++dd++vleiwn+vf+q+nre+d tl+pLp++++dtGmg+erlv+v+q+++snydtd+f+p++e+i+e++ga +y      ed d++d+a+
    EPX70595.1 264 SVPELVNMDDPNVLEIWNIVFIQYNREKDSTLRPLPNRHVDTGMGFERLVSVIQNKTSNYDTDVFTPLFEKIQELTGArPYtgkmgeEDVDGIDTAY 360
                   *****************************************************************************9999*****99********* PP

                   HHHHHHHHHHHHHHHTT--SSSSHHHHHHHHHHHHHHHHH.HHTT-SST.HHHHHHHHHHHHHTTTGCCHHCCHHHHHHHHHHHHHHHHCCHHHHHH CS
  tRNA-synt_2c 273 rviaDHvralafaladGvvpsnegrgYvlRrllRravrha.kkLglkek.flaklvavvvevlgdvypelkekeekveeiieeEeerFakTlerGlk 367
                   rv+aDHvr+l+fa++dG+vp+negrgYvlRr+lRr+ r++ kk+g+  + f+++l  +vve++g+++pel++k + v+e+++eEe +F+kTl+rG+k
    EPX70595.1 361 RVVADHVRTLTFAISDGGVPNNEGRGYVLRRILRRGARYVrKKFGVPIGsFFSQLSLTVVEQMGEFFPELHRKVADVRELLDEEEVSFSKTLDRGEK 457
                   ****************************************9******988*********************************************** PP

                   HHHHHHHHCCC..CSEEXHHHHHHHHHCHXXXHHHHHHHHHCTTXEEXHHHHHHHHHHHHHHHCCHHSXSS....XXXXXXXXTTSHCHH......C CS
  tRNA-synt_2c 368 lleelikklkk..kkelsgedafkLydtyGfPvdltkeiaeekglkvdiegfekameeqrerskkekkekk....likkdvealkelkkt......e 452
                   ++e++++++kk  +++l+g+d+++Ly+tyGfPvdlt+++aee g+k+d++gfe+a+++++e sk+++k ++    l+  dv+al +l k+      +
    EPX70595.1 458 MFEQYAAAAKKssSNVLQGNDVWRLYETYGFPVDLTHLMAEEAGIKIDEPGFEAAQAHSKEMSKRATKSGSsggeLLVLDVHALGDLAKMdtvpktN 554
                   *******9999999*************************************************9999887778888999999999999886666666 PP

                   CTSTTTXXXXXXTSXXXXXXSEEE...EEEEEEETTEEEESEEXXXXSSSSCSXXXE.EEEESSEEEEESEEEEETTEEEEEXSS.XSXXXTTSEEE CS
  tRNA-synt_2c 453 eflgyeeleaeakvlallkdkefv...eeveegeevgvvLdrTpfYaesGGqigDeG.liekegaefrvkdvqkakgvvlhkgkleegklkvgdkvk 545
                   ++ ++++++  +++ a+++++ f+   + +e+ge+ g++LdrT+fYae+GGq++D+G ++ +  a+frv++vq+++g+vlh+g le+g+l+vgdkv+
    EPX70595.1 555 DSYKHHDATLMSTIKAIYHRDGFQsttKVFESGEQIGILLDRTNFYAEQGGQENDTGhIVIDGIADFRVTNVQVYAGYVLHTGFLEYGNLNVGDKVT 651
                   6677777789999999998766551114567899999********************55555559******************************** PP

                   EEEXH CS
  tRNA-synt_2c 546 aevde 550
                   +e+de
    EPX70595.1 652 CEYDE 656
                   ****8 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 0.52
                   HHHCTTXEEXHHHHHHHHHHHHHHHCCHHSXSSXXXXXXXXTTS CS
  tRNA-synt_2c 404 iaeekglkvdiegfekameeqrerskkekkekklikkdvealke 447
                    +++++++ ++ +  k+ + q + +++++++++ ++  +e +ke
    EPX70595.1 866 AVRKHNMREHVAKITKQFQDQVKAANAAEQKEA-VNLVAEYFKE 908
                   444555555555555555555554443333333.3333333333 PP

>> tRNA_SAD  Threonyl and Alanyl tRNA synthetase second additional domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.8   0.2   5.2e-21   2.4e-17       1      44 []     756     815 ..     756     815 .. 0.95

  Alignments for each domain:
  == domain 1  score: 62.8 bits;  conditional E-value: 5.2e-21
                 EEEEEETT.................EEEEESS---SBGGGC-SEEEECCECCCTCEEEEE CS
    tRNA_SAD   1 vrvvsiGd................isvelCgGtHvpnTgeIgafkilseesiakglrRIy 44 
                 vr+v iG                 +s+e+CgGtHv n geI++f+il+e++iakg+rRI+
  EPX70595.1 756 VRLVCIGVdidtllknpknpewhnYSIEFCGGTHVYNSGEIKDFVILEESGIAKGIRRIV 815
                 89999*966889999999***999***********************************7 PP

>> DHHA1  DHHA1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.5   3.3   6.2e-17   2.8e-13       3     137 ..     871    1012 ..     869    1013 .. 0.90

  Alignments for each domain:
  == domain 1  score: 50.5 bits;  conditional E-value: 6.2e-17
                  HHCHHHHHHHHHHHCHHHHHHHHHHHHHHHTCEEEC....TCEEEEEECHCCHHHHHHHHHHHHHHTHGBTTCEEEEEEEECTEEEEEEEESSH... CS
       DHHA1    3 slneerkelekeleelkealaklkaeellekaeevk....gvkvlvaevgeewdagalgiaadklksklkkpvivfvakeegdkvkvsarskkd... 92  
                  +++e  +++ k+ ++  +a+++++++e+++ + e+     +  ++va+v   ++a+al  a    k++lk +++ +va+++  kv+  + ++++   
  EPX70595.1  871 NMREHVAKITKQFQDQVKAANAAEQKEAVNLVAEYFkenpEAHFVVAKVPISANAKALSFALAHTKKNLKGKSVYLVASDNV-KVAHACLVSNEalq 966 
                  567777788888888888888888888888888887888**********************9999998988*******9988.999999999889** PP

                  SS-HHHHHHHHHHHTTCCEEEE.TCEEEEEEEHCHHHHHHHHHHHH CS
       DHHA1   93 gvdagelakeaaaklgggGGGH.dlAaGagipaekleealealeea 137 
                  ++  +e+ ++++ ++gg+ GG+ d  +G g +ae++++a+e++ e+
  EPX70595.1  967 KITPQEWSQKVCLQIGGRSGGKgDTCQGVGDKAENVDAAIEEAIEF 1012
                  ******************************************9997 PP

>> Prok-TraM  Prokaryotic Transcriptional repressor TraM
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.23     1e+03      42      67 ..     450     473 ..     445     483 .. 0.70
   2 ?   12.1   0.3   4.3e-05      0.19      28      79 ..     858     909 ..     837     918 .. 0.80

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.23
                 HHHHHHHHHHHCHHHSCHHHHTTSCH CS
   Prok-TraM  42 rllaaaeavyeewvrasadekvseav 67 
                 + l++ e+++e++++  a +k+s++v
  EPX70595.1 450 KTLDRGEKMFEQYAA--AAKKSSSNV 473
                 678999******844..444444444 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 4.3e-05
                 HHHHHHHHHHHHH..HHHHHHHHHHHHCHHHSCHHHHTTSCHHSHHHHHHHHHH CS
   Prok-TraM  28 eleaLaisAIreh..RrllaaaeavyeewvrasadekvseavleelqeeYveaq 79 
                 +l +L++sA+r+h  R+ +a+  + +++ v+  a + +++++  +l  eY + +
  EPX70595.1 858 DLSKLTVSAVRKHnmREHVAKITKQFQDQVK--AANAAEQKEAVNLVAEYFKEN 909
                 899**********999************655..555555556666777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1019 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       962  (0.0536561); expected 358.6 (0.02)
Passed bias filter:                      728  (0.0406046); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.81u 0.28s 00:00:01.09 Elapsed: 00:00:00.45
# Mc/sec: 6783.34
//
Query:       EPX70596.1  [L=261]
Description: eukaryotic protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-46  158.6   4.7    2.1e-46  158.4   4.7    1.0  1  HVSL      Uncharacterised conserved protein
  ------ inclusion threshold ------
      0.044   13.6   0.2       0.15   11.9   0.0    1.9  2  S6PP_C    Sucrose-6-phosphate phosphohydrolase C-terminal
       0.19   11.8   1.3       0.43   10.7   0.1    2.2  3  Cas6b_C   Cas6b C-terminal domain


Domain annotation for each model (and alignments):
>> HVSL  Uncharacterised conserved protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.4   4.7   3.5e-50   2.1e-46       1     236 [.      25     257 ..      25     259 .. 0.88

  Alignments for each domain:
  == domain 1  score: 158.4 bits;  conditional E-value: 3.5e-50
        HVSL   1 PpLPssfhdlyastvrtsteddpslhqGrkRsiphveGnWpthvYlewkpseeekellsellkkleekleeevklhslltsdlgaplplHiSLSrplvl 99 
                 P+LP+ fhdly+++   +t d+p  h+GrkR+  h eG+W++ +Yl++++ +  k+ ++++++ +++++      +sl+ s+ g+ ++lH+SLS+ + +
  EPX70596.1  25 PKLPEFFHDLYKKKR--KTFDSPIFHEGRKRTKAHLEGQWAVQIYLDVEIHSLHKQRIKDIIA-AQQDF------KSLFISEYGVEKNLHLSLSELFRI 114
                 89**********988..8******************************************999.44444......8*********************** PP

        HVSL 100 rthqkdsfldslkkelkssakrrFevsfsglkwvsndektRsFlvlrvkspendeLkklleavnkvleefglpplykdeaFHiSiawslgepseeekee 198
                  +++++++ +++++e+++ ++r+ + ++++++++ ndektR+F+vl+ + ++++ L+kll+ ++k++++f+ ++l +d  +H+Siaw+++++++ e   
  EPX70596.1 115 PSDERKAVFATWRQECQQLQQRTIKYTLQEVRLLFNDEKTRMFFVLKATFEKSSFLRKLLSVSDKLMKKFEGKALREDFLPHVSIAWAHAKQRDFEVWT 213
                 ******************************************************************************************876666555 PP

        HVSL 199 llselekaledaek......eeelkqleikveevkvkiGnkvts 236
                  +++++ ++ + e+      +  ++ ++++ ++ k+ +Gn+v+s
  EPX70596.1 214 SRDRDNMRFIELEAlltrlqSAFVEPFSLENKNAKMLMGNRVFS 257
                 56666656666555543322222333333559999999999986 PP

>> S6PP_C  Sucrose-6-phosphate phosphohydrolase C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   2.5e-05      0.15      54     102 ..      87     135 ..      66     159 .. 0.79
   2 ?   -1.6   0.0      0.39   2.3e+03      81      95 ..     200     214 ..     190     225 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 2.5e-05
      S6PP_C  54 ilapsgvlvhpsGvekslhesidalrklyGdkkgkkfrvWvDrvlssqi 102
                 + + ++ ++  +Gvek+lh s+ +l ++  d++   f +W  + ++ q 
  EPX70596.1  87 QQDFKSLFISEYGVEKNLHLSLSELFRIPSDERKAVFATWRQECQQLQQ 135
                 3345799*********************************888776665 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.39
      S6PP_C  81 lyGdkkgkkfrvWvD 95 
                  +++ k+++f vW  
  EPX70596.1 200 AWAHAKQRDFEVWTS 214
                 567788899999974 PP

>> Cas6b_C  Cas6b C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.6   9.4e+03      60      74 ..      66      80 ..      60      95 .. 0.51
   2 ?   10.7   0.1   7.2e-05      0.43       2      44 ..     133     175 ..     132     198 .. 0.92
   3 ?   -1.2   0.0      0.36   2.1e+03      69      92 ..     237     260 ..     224     261 .] 0.77

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.6
     Cas6b_C 60 ekievkiteveekkv 74
                  ++v+i++++++++
  EPX70596.1 66 IYLDVEIHSLHKQRI 80
                444444444444433 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 7.2e-05
     Cas6b_C   2 lseelieYkfltpwlaLnqenykkykklkseeekkellekiLv 44 
                 l++++i+Y +    l +n+e+ + +  lk + ek ++l+k+L 
  EPX70596.1 133 LQQRTIKYTLQEVRLLFNDEKTRMFFVLKATFEKSSFLRKLLS 175
                 67899***********************************995 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 0.36
     Cas6b_C  69 veekkvklkeqkmlafkgeFktnf 92 
                 ve+ + + k+ kml  +  F++nf
  EPX70596.1 237 VEPFSLENKNAKMLMGNRVFSANF 260
                 677788899999999999999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       784  (0.043728); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1877.44
//
Query:       EPX70597.1  [L=334]
Description: CMGC/CK2 protein kinase Cka1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.9e-60  203.4   0.0    4.6e-60  203.2   0.0    1.0  1  Pkinase         Protein kinase domain
    1.8e-19   70.0   0.0    2.7e-19   69.5   0.0    1.2  1  Pkinase_Tyr     Protein tyrosine kinase
    7.1e-06   26.1   0.1    8.3e-05   22.6   0.1    2.3  3  APH             Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.011   14.5   0.0      0.016   14.0   0.0    1.2  1  Pkinase_fungal  Fungal protein kinase
      0.018   14.6   0.1      0.035   13.7   0.1    1.5  1  Choline_kinase  Choline/ethanolamine kinase
      0.029   13.7   0.3      0.059   12.7   0.3    1.4  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
      0.066   12.6   0.0        2.1    7.7   0.0    2.5  2  P53_tetramer    P53 tetramerisation motif


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  203.2   0.0   1.8e-63   4.6e-60       1     264 []      43     328 ..      43     328 .. 0.93

  Alignments for each domain:
  == domain 1  score: 203.2 bits;  conditional E-value: 1.8e-63
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS.CTTB--EEEEEEE..SSEEEEEEE--TTEBHHHHHHHHSS-- CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklk.hpnivrlyevfee..kdelylvleyveggeladllerkgsls 96 
                 ye l+k+G+G++++V+++++  ++ +  +K++k  k kk k     rEikil++l   pni+ l++v+++  +++  l++eyv++ ++ +l+    +ls
  EPX70597.1  43 YELLRKVGRGKYSEVFEGINVLNNSKCIIKVLKPVKYKKIK-----REIKILQNLTgGPNIIGLLDVVRDpeSKTPSLIFEYVDNIDFRTLYP---TLS 133
                 7889*******************************999866.....7***********************5455566***************8...6** PP

                 HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEE.TTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHH.TTSCBSHHHHHHHHHHHHHHHHHS CS
     Pkinase  97 eeeakkiakqilegleylHskgiiHrDlKpeNiLid.ekgelKitDFGlakelessskltsfvgtseYlAPEvl.keneyskkvDvWslGvilyelltg 193
                 + +++ + +++l++l+++Hs+gi+HrD+Kp+N++id ++++l+++D+Gla+ ++ + +++ +v+++++  PE+l + +ey+ + D+Ws Gv+++ l+++
  EPX70597.1 134 DYDIRYYSYELLKALDFCHSRGIMHRDVKPHNVMIDhQRKKLRLIDWGLAEFYHAGMEYNVRVASRYFKGPELLvDFREYDYSLDIWSFGVMFAALIFK 232
                 ************************************77777*********************************888********************** PP

                 S-STTTSSHHHHHHHHHHTHHHHHHHCT.SHH...HHHTTS..............................-HHHHHHHHHHT-SSGCCSTTHHHHHTS CS
     Pkinase 194 kppfsgekgkekvekeldqlekilkilg.etkeklpeasei..............................seeakdllkkllkkdpkkRltaeellqh 261
                 k  f   +g+     ++dql+ki+k+lg +  +++ ++++i                              +++a+d+l++ll++d+++Rlt++e+++h
  EPX70597.1 233 KDTFF--RGR----DNYDQLVKIAKVLGtDDLFAYIRKYQIvldrqydnvlgqypkrdwysfvnrenrqlaNDDAIDFLSRLLRYDHQERLTCKEAMAH 325
                 *9999..344....489***********533455555666689999999************************************************** PP

                 GGG CS
     Pkinase 262 pyl 264
                 py+
  EPX70597.1 326 PYF 328
                 **8 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.5   0.0     1e-22   2.7e-19       2     205 ..      44     236 ..      43     253 .. 0.83

  Alignments for each domain:
  == domain 1  score: 69.5 bits;  conditional E-value: 1e-22
                  EEEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS.-BTTB--EEEEEE..SSSSEEEEEE--TTEBHHHHHHHTC CS
  Pkinase_Tyr   2 elgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkkl.khpnivkllgvct..keepllivteyvkgGdLlkfLrkke 96 
                  el +k+G+G++++V+eg        ++ k+++K+lk  + +    ++ +e+ki+++l   pni+ ll v+   ++++  +++eyv++ d+++      
   EPX70597.1  44 ELLRKVGRGKYSEVFEGINV----LNNSKCIIKVLKPVKYK----KIKREIKILQNLtGGPNIIGLLDVVRdpESKTPSLIFEYVDNIDFRTLYP--- 130
                  57899************999....88999******776555....599*********99************8878889*********99987544... PP

                  TTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETT.EEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE.EEHHHHHHHHH CS
  Pkinase_Tyr  97 kekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenk.vvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk.ftsksDvWsfG 192
                    +l+  d+  +++++ k++++ +s+ ++Hrd+   Nv++++++ + ++ D GLa+  +   ey+++  +     +  pE l + + +  + D+WsfG
   EPX70597.1 131 --TLSDYDIRYYSYELLKALDFCHSRGIMHRDVKPHNVMIDHQRkKLRLIDWGLAEFYHAGMEYNVRVAS---RYFKGPELLVDFReYDYSLDIWSFG 223
                  ..47889999******************************986549**********99666666544433...34569**987654499999****** PP

                  HHHHHHHTTSSGT CS
  Pkinase_Tyr 193 vllwEiftlgesp 205
                  v+   ++ + ++ 
   EPX70597.1 224 VMFAALIFKKDTF 236
                  *987776655555 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.22   5.8e+02      25      83 ..      71     126 ..      61     148 .. 0.73
   2 !   22.6   0.1   3.2e-08   8.3e-05     165     205 ..     153     192 ..     142     214 .. 0.76
   3 ?   -2.7   0.0       1.7   4.4e+03      96     101 ..     299     304 ..     245     323 .. 0.57

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.22
                 EEEE-TTS-HHHHHHHHHHHHHHHHTT-B--B-CTTBS-EEETTEEEEEEE----EE-S CS
         APH  25 lrrnpparaaeeirrevallrlLakagvpvPevlagdtddeeigllfalieyvpgrsll 83 
                  ++  p   + +i re ++l++L + +  +  +l+    d e+ ++++++eyv+  +++
  EPX70597.1  71 IKVLKPV-KYKKIKREIKILQNLTGGPN-IIGLLDVV-RDPESKTPSLIFEYVDNIDFR 126
                 5666677.88999*********998843.44555532.355555688888888866665 PP

  == domain 2  score: 22.6 bits;  conditional E-value: 3.2e-08
                 -EEEE-SS-SGGGEEEC..TTEEEEE---TT-EEEECCHHH CS
         APH 165 ptvllHgDlhpgNllvdpddgrvtGviDfedaglgpplyDl 205
                 +++++H+D +p+N+++d +  ++  +iD+++a   ++  + 
  EPX70597.1 153 SRGIMHRDVKPHNVMIDHQRKKL-RLIDWGLAEFYHAGMEY 192
                 689**************544554.79*****9888877665 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 1.7
                 HHHHHH CS
         APH  96 ealgef 101
                 +++++f
  EPX70597.1 299 DDAIDF 304
                 333333 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   6.1e-06     0.016     325     364 ..     153     188 ..     143     222 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 6.1e-06
  Pkinase_fungal 325 kagiLHrDiSenNilitdskkegerkglLiDLDlakelsd 364
                       gi+HrD+  +N++i     ++++k  LiD  la  ++ 
      EPX70597.1 153 SRGIMHRDVKPHNVMID----HQRKKLRLIDWGLAEFYHA 188
                     789*************9....5577788888888877764 PP

>> Choline_kinase  Choline/ethanolamine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   1.4e-05     0.035     148     176 ..     157     185 ..     109     193 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.4e-05
                     E-S--SGGGEEE.-CTTEEEE--GTT-EE CS
  Choline_kinase 148 cHnDlqegNillnkeekklvlIDFEYagy 176
                      H D+ ++N++ ++++kkl lID+  a +
      EPX70597.1 157 MHRDVKPHNVMIDHQRKKLRLIDWGLAEF 185
                     478*********************77665 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.3   2.3e-05     0.059     135     165 ..     152     179 ..     145     185 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 2.3e-05
         Kdo 135 hragvnHadlyaknillqqeeeeeaeiwliD 165
                 h++g++H+d+ ++n++++ +     ++ liD
  EPX70597.1 152 HSRGIMHRDVKPHNVMIDHQR---KKLRLID 179
                 9*****************998...8999999 PP

>> P53_tetramer  P53 tetramerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.057   1.5e+02      20      28 ..      41      49 ..      40      50 .. 0.89
   2 ?    7.7   0.0   0.00082       2.1      17      29 ..     238     250 ..     237     257 .. 0.89

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.057
  P53_tetramer 20 erYEmLkKi 28
                  ++YE+L+K+
    EPX70597.1 41 DNYELLRKV 49
                  8******96 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.00082
  P53_tetramer  17 RGRerYEmLkKin 29 
                   RGR++Y  L Ki 
    EPX70597.1 238 RGRDNYDQLVKIA 250
                   9**********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (334 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       596  (0.0332422); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 2335.51
//
Query:       EPX70598.1  [L=72]
Description: anaphase-promoting complex subunit Hcn1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.1e-08   35.7   0.8    1.7e-08   35.2   0.8    1.5  1  ANAPC_CDC26  Anaphase-promoting complex APC subunit CDC26


Domain annotation for each model (and alignments):
>> ANAPC_CDC26  Anaphase-promoting complex APC subunit CDC26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.2   0.8   9.5e-13   1.7e-08       1      31 [.       1      31 [.       1      72 [] 0.68

  Alignments for each domain:
  == domain 1  score: 35.2 bits;  conditional E-value: 9.5e-13
  ANAPC_CDC26  1 MLRRkPTtItLtseDiaeyederqrqkeqaa 31
                 MLR  PT+I++t+eD+ ey+de++++ +   
   EPX70598.1  1 MLRKQPTAIQITAEDVFEYDDEKLKENHDFS 31
                 **********************877765443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       580  (0.0323498); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.27s 00:00:00.64 Elapsed: 00:00:00.43
# Mc/sec: 502.15
//
Query:       EPX70599.1  [L=210]
Description: xanthine phosphoribosyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    9.1e-07   28.5   0.0    1.5e-06   27.9   0.0    1.4  1  Pribosyltran  Phosphoribosyl transferase domain


Domain annotation for each model (and alignments):
>> Pribosyltran  Phosphoribosyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   0.0   8.2e-11   1.5e-06      16     117 ..      18     133 ..       7     175 .. 0.79

  Alignments for each domain:
  == domain 1  score: 27.9 bits;  conditional E-value: 8.2e-11
                   EETTEEEEEE--GGGEEEEEEETTTHHHHHHHHHHS......TT-EE-EEEEEE-T..TT--EE................EE----TTSEEEEE-SE CS
  Pribosyltran  16 arlaaeileeyngkpdvvvgiargGvpfakiladeL......evplayvrkvkyrp..dgseeaargssdes........rlledpagkkVliVDDi 96 
                   a+ a  il+   ++pdv+++i  gG+++a il   L      ++p+  +  + y++   +s+e ++g+++ +            ++ gk +liVD +
    EPX70599.1  18 AEQANHILQ--VFRPDVIIAIGGGGFIPARILRTFLkkkgskNIPIQAIGLSLYEEltTDSPEEVPGVEVKRtqwldfstLGMVSLVGKNILIVDEV 112
                   334444444..499****************************8898877777776422445555555555556*****887777889********** PP

                   ESSSHHHHHHHHHHHCC-BSE CS
  Pribosyltran  97 ldtGgTllaalelLkekgpee 117
                    dt +Tl++a++ L +  +++
    EPX70599.1 113 DDTRTTLHYAVRELQNDVAKQ 133
                   **************9988874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       982  (0.0547716); expected 358.6 (0.02)
Passed bias filter:                      727  (0.0405488); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.30s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 1436.80
//
Query:       EPX70600.1  [L=393]
Description: zinc ion transporter Zhf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.2e-52  175.8   3.4      1e-51  175.6   3.4    1.1  1  Cation_efflux  Cation efflux family


Domain annotation for each model (and alignments):
>> Cation_efflux  Cation efflux family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.6   3.4   5.6e-56     1e-51       2     199 .]      10     301 ..       9     301 .. 0.98

  Alignments for each domain:
  == domain 1  score: 175.6 bits;  conditional E-value: 5.6e-56
  Cation_efflux   2 ilsllanlilalvelivglltnSlalladafhslsdlvsllllllalkls.rkppderfpfGygrlevlgalvsgllllglavfllleaiqklike 96 
                    il l + ++++++e+i+g+   Slal+ad+fh+l d+vsll++l a +l+ + +   ++++G++r+e lgal +g++l++l +f+++eaiq++i e
     EPX70600.1  10 ILLLTIDITFFFIEIITGYAIDSLALIADSFHMLNDIVSLLIALWATRLAhSTDYESKYTYGWQRAEILGALANGVFLIALCMFIFMEAIQRFI-E 104
                    7888999*******************************************9999****************************************.* PP

  Cation_efflux  97 gereihaglalvvalvslvvnlalllilrragrkl............................................................. 131
                    ++ + ++ l+l+v+  +l+ n++++++++ +++++                                                             
     EPX70600.1 105 PPSVTNPTLMLFVGSMGLLSNIVGMFLFHDHSHAHghghdhhqtsnarnyefpeevddiesvlpstivnrchfqglphdhpaadiaatenspllsy 200
                    ************************************************************************************************ PP

  Cation_efflux 132 .................................rsaalkaaalhvlgDaltslgvlvsalvillfnlksgplaDpvaslligliilysalkllkes 194
                                                     r+ ++++++lhvlgDal+++gv+ +alvi ++++ +++ +Dp++s+l+ +iil sa +l+k++
     EPX70600.1 201 igsptgsnvsrkspsnhgaiqdsslqkdehkpkRNLNMHGVFLHVLGDALGNVGVISAALVIGYTDYSWRYFFDPCVSVLLTFIILLSAIPLCKSA 296
                    ****************************************************************977766************************** PP

  Cation_efflux 195 lseLl 199
                     ++Ll
     EPX70600.1 297 ALILL 301
                    ***97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (393 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       606  (0.0338); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2797.33
//
Query:       EPX70601.1  [L=1086]
Description: Clr6 histone deacetylase complex subunit Pst2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.4e-67  226.8   8.4    1.1e-66  225.5   8.4    1.6  1  Sin3a_C         C-terminal domain of Sin3a protein
    3.6e-36  123.2   1.1    1.1e-35  121.6   0.1    2.3  2  Sin3_corepress  Sin3 family co-repressor
    1.4e-10   41.1  15.7     0.0013   18.8   0.2    4.2  3  PAH             Paired amphipathic helix repeat
  ------ inclusion threshold ------
      0.017   15.5   0.0       0.38   11.2   0.0    2.7  2  MitMem_reg      Maintenance of mitochondrial structure and fu
      0.069   12.6   0.3       0.17   11.4   0.3    1.5  1  Neurexophilin   Neurexophilin
       0.36   11.1   5.9        1.1    9.5   5.9    1.7  1  MBR1            Mitochondrial biogenesis regulation protein 1


Domain annotation for each model (and alignments):
>> Sin3a_C  C-terminal domain of Sin3a protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  225.5   8.4   3.6e-70   1.1e-66       2     285 ..     761    1035 ..     761    1036 .. 0.94

  Alignments for each domain:
  == domain 1  score: 225.5 bits;  conditional E-value: 3.6e-70
     Sin3a_C    2 faNttfYvflrlfqiLyeRLlkikqaeeqvaeevkerkankvavelgldkkesealalrleseeeeeeyYsqllelveklldGeidqsqfEdslRem 98  
                  ++ + +Y+f+rlf++Ly+RLl +k++e+ v + +++ k+n+va+e++l+++++++l +      ee++yY+++  +  +l+ G +dqsqfEd +R +
  EPX70601.1  761 YGYSAIYIFFRLFNMLYDRLLLLKNLENCVGDVQRQIKPNSVAQEHNLWRSRESELPELP----EEDTYYNKTFVMSLRLIYGVLDQSQFEDYMRFY 853 
                  78899********************************************99999999777....9******************************** PP

     Sin3a_C   99 fgikaYklfTldKliqalvkqlqtivsDekcqellelfekerskeet.tsqdeisyrkkaekll.kdenlfriewkseskkltiqlldkddetlddd 193 
                  +g+kaY+l+T+dKl+ +++kq+++ivsD k +++l++ e+ +s+ +  +s de  yr++ e++l +de lfr+ w+ ++k++ti+ll++ + tld++
  EPX70601.1  854 YGNKAYELYTVDKLVWSIAKQVHHIVSDGKFKHVLSVIEEYNSRFTPkRSYDEFLYRMNLERYLnSDEMLFRFAWNFKEKQFTINLLRRANVTLDET 950 
                  *****************************************9887776999*********************************************9 PP

     Sin3a_C  194 eveaeerwkeYvesYvlveptegvereklkkvfLkRnlkaerkeeekkeeeeqekaekeeeaekeleveekleiriclnsyklvyvpgtedv 285 
                    ++++ wk+Y+e+Y+ ++ te v+ ++ + +fL R+++ e ++e  + +        +++ ++++ ++++l+ r c+ns+kl+yvp t+dv
  EPX70601.1  951 LESQRQGWKKYLEDYTAQKGTEYVSYKNYRCPFLCRTIPFEGTSEVTRMSL-------QTRLMSSVCFQSDLKARLCINSFKLLYVPCTQDV 1035
                  9889**********************************7665554444433.......33678889999*********************97 PP

>> Sin3_corepress  Sin3 family co-repressor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.6   0.1   3.7e-39   1.1e-35       2      98 .]     342     437 ..     341     437 .. 0.98
   2 ?   -1.7   0.1         1   3.1e+03      44      68 ..     893     916 ..     886     924 .. 0.82

  Alignments for each domain:
  == domain 1  score: 121.6 bits;  conditional E-value: 3.7e-39
  Sin3_corepress   2 rlgpsYrlLpksyqqpkcsgrdelekevLNdewvsvptwasedsgsfkasrknqyeealfrcEderyelDmvieanrstiklleelakkiesmse 96 
                      +gpsYrlLp +++  +c+grdel++++LNdewvs+ptwase+sg f+++rk++ye+a++++E+erye+D +iea++ ti++l++la ++e m e
      EPX70601.1 342 DYGPSYRLLPLEERMSPCTGRDELSWSILNDEWVSHPTWASEESG-FIVQRKTPYEDAMTKLEEERYEFDRHIEAINWTIRTLDNLAARLEDMPE 435
                     58******************************************8.***********************************************99 PP

  Sin3_corepress  97 ee 98 
                     ee
      EPX70601.1 436 EE 437
                     87 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1
  Sin3_corepress  44 dsgsfkasrknqyeealfrcEdery 68 
                     ++ + +++ k +y e l+r+  ery
      EPX70601.1 893 EY-NSRFTPKRSYDEFLYRMNLERY 916
                     44.356678999*******999998 PP

>> PAH  Paired amphipathic helix repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.2   4.4e-07    0.0013       5      43 ..      62     100 ..      61     102 .. 0.96
   2 !   12.2   5.0   5.2e-05      0.15       2      45 .]     164     207 ..     163     207 .. 0.96
   3 !   15.4   0.2   5.1e-06     0.015       1      41 [.     278     318 ..     278     322 .. 0.96

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 4.4e-07
         PAH   5 eFLdiLhdyqkeqidskeVyeqVskLFhdhpdLlreFnq 43 
                 +FL+i +   k+ id ++ +e+V  L+ d p Ll e n+
  EPX70601.1  62 AFLEIVKALDKQIIDFPGFIERVHVLLNDFPKLLLELNT 100
                 6***********************************998 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 5.2e-05
         PAH   2 vYkeFLdiLhdyqkeqidskeVyeqVskLFhdhpdLlreFnqFL 45 
                 ++++F  +L+ +++   +  e+ +++++L++  p L + F  FL
  EPX70601.1 164 TFQQFQSLLQQFSRSELNVDELRSKIASLLSQFPALQQQFQDFL 207
                 6899***********99**************************8 PP

  == domain 3  score: 15.4 bits;  conditional E-value: 5.1e-06
         PAH   1 evYkeFLdiLhdyqkeqidskeVyeqVskLFhdhpdLlreF 41 
                 ++Y+eFL++ + y ++ i++ ++ ++   ++++ pdL + F
  EPX70601.1 278 DIYHEFLKLINLYVQKIISRDTLLARSFAFLRSMPDLWKSF 318
                 79***********************************9998 PP

>> MitMem_reg  Maintenance of mitochondrial structure and function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.24   7.2e+02      40      83 ..     144     188 ..     121     213 .. 0.64
   2 ?   11.2   0.0   0.00013      0.38      20      54 ..     264     298 ..     249     340 .. 0.72

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.24
  MitMem_reg  40 ldlikdYlkkveegelpvnhe.ilrnlqkllnllP..hleteeleke 83 
                  +++ +Y+ kv+ g l  +h    ++ q+ll++     l+ +el+++
  EPX70601.1 144 YHRAISYVAKVK-GAL-KDHGsTFQQFQSLLQQFSrsELNVDELRSK 188
                 566778999998.766.344447777777776665444444444443 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00013
  MitMem_reg  20 stlstglnrqyyslkilqerldlikdYlkkveege 54 
                  +  ++++rq+ sl i +e l+li  Y++k+++ +
  EPX70601.1 264 AEFFKQVKRQLPSLDIYHEFLKLINLYVQKIISRD 298
                 678899*************************9765 PP

>> Neurexophilin  Neurexophilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.3   5.6e-05      0.17     123     194 ..     973    1046 ..     964    1054 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 5.6e-05
  Neurexophilin  123 lieakdski.fncr.veyekvdkakktslCnydpsklCnqedlqskvsWlCskPfkviCiyisfystdyrLvqk 194 
                     +++ k+ +  f cr + +e +++ +++sl +   s +C+q+dl+++     +k   v+C +  + s dy L+++
     EPX70601.1  973 YVSYKNYRCpFLCRtIPFEGTSEVTRMSLQTRLMSSVCFQSDLKARLCINSFKLLYVPCTQDVYLSRDYMLLNN 1046
                     56778888889998578******************************999999999*************99975 PP

>> MBR1  Mitochondrial biogenesis regulation protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   5.9   0.00036       1.1     123     190 ..     640     711 ..     627     717 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00036
        MBR1 123 fllrnsrrnSssfihqLSrqs....lrpsisssnsnttsesksnslnsgdtnnennksnatkrlssrsscya 190
                  ++r++r nS + + +LS+      +r+s+s +   +    ++nslns+dt+ +n +s +t++ +    ++a
  EPX70601.1 640 KVIRRKRSNSITQLTELSKHQkiseQRQSRSAAAARKKGDVTNNSLNSDDTPSDNASSASTSKQQLSRPAAA 711
                 679****************9988888999999999999999*************999986666554444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1086 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       919  (0.0512577); expected 358.6 (0.02)
Passed bias filter:                      507  (0.0282782); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.81u 0.31s 00:00:01.12 Elapsed: 00:00:00.47
# Mc/sec: 6914.54
//
Query:       EPX70602.1  [L=676]
Description: PLK protein kinase Plo1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.4e-75  251.4   0.0    1.5e-74  250.7   0.0    1.3  1  Pkinase         Protein kinase domain
    3.5e-41  141.2   0.0    6.7e-41  140.3   0.0    1.4  1  Pkinase_Tyr     Protein tyrosine kinase
    1.5e-34  117.9   1.0    9.7e-18   64.1   0.4    2.6  2  POLO_box        POLO box duplicated region
      1e-05   25.0   0.0    2.9e-05   23.5   0.0    1.7  2  Kinase-like     Kinase-like
    2.6e-05   23.2   0.5    5.8e-05   22.0   0.1    1.8  2  Pkinase_fungal  Fungal protein kinase
    0.00063   18.8   2.3    0.00077   18.5   0.1    1.9  2  Haspin_kinase   Haspin like kinase domain
     0.0079   16.1   0.0      0.014   15.3   0.0    1.3  1  APH             Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.061   12.7   0.1       0.11   11.8   0.1    1.3  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  250.7   0.0   6.5e-78   1.5e-74       1     264 []      41     296 ..      41     296 .. 0.93

  Alignments for each domain:
  == domain 1  score: 250.7 bits;  conditional E-value: 6.5e-78
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HH CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslsee 98 
                 y++   +GeG+f+++++++ +++g+i+A K+i+k + +++k+ +k++ Eik++++++hpn+v l+++fe+k+++ylvle++e+++l++ll++++ l+e 
  EPX70602.1  41 YTRYDCIGEGGFARCFRVR-DDNGNIYAAKVIAKASLQNDKTrQKLFGEIKVHQSMSHPNVVGLIDCFEDKTNVYLVLELCEHKSLMELLRKRKLLTEP 138
                 567788*************.6***********999887777779******************************************************* PP

                 HHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.BCTTTSCGGGS-HHHH..TTSCBSHHHHHHHHHHHHHHHHHSS CS
     Pkinase  99 eakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.ltsfvgtseYlAPEvl..keneyskkvDvWslGvilyelltgk 194
                 e+++++ qil +l+y+H+k++iHrDlK  Ni++de++++Ki+DFGla+ l  +++ +++++gt++Y+APE+l  +++++s +vD+Ws+Gv++y ll gk
  EPX70602.1 139 EVRFLMLQILGALKYMHNKRVIHRDLKLGNIMLDESNNVKIGDFGLAALLMDDEErKMTICGTPNYIAPEILfnSKEGHSFEVDLWSAGVVMYALLVGK 237
                 ************************************************999888879****************999999******************** PP

                 -STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 195 ppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 ppf++++ k+    ++++       ++ ++ ++p +  is+eak+l+ +ll++dp+ R++++++ +h ++
  EPX70602.1 238 PPFQDKEVKT----IYKK-------IKANSYSFPSNIPISSEAKNLIASLLTQDPSVRPSVDDIANHGFF 296
                 ****444333....3333.......34468899999999****************************997 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.3   0.0     3e-44   6.7e-41       6     257 ..      46     292 ..      42     293 .. 0.90

  Alignments for each domain:
  == domain 1  score: 140.3 bits;  conditional E-value: 3e-44
                  EEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHH CS
  Pkinase_Tyr   6 klGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekekltlk 103
                   +GeG f++ ++ + + + +    kV+ K   +  +++++++l+ e+k+ ++++hpn+v l+ +  ++ ++++v+e++++ +L + Lrk+  + lt  
   EPX70602.1  46 CIGEGGFARCFRVRDD-NGNIYAAKVIAKASLQ--NDKTRQKLFGEIKVHQSMSHPNVVGLIDCFEDKTNVYLVLELCEHKSLMELLRKR--KLLTEP 138
                  6899999999999888.7777788888888744..444469************************************************8..888889 PP

                  HHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE..EEHHHHHHHHHHHHHHHH CS
  Pkinase_Tyr 104 dllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk..ftsksDvWsfGvllwEif 199
                  ++  ++lq+  +++y+++k+++Hrdl   N++l+e++ vki+DfGLa  ++ dde +k  +     +++apE+l+++k   + + D Ws Gv+++ ++
   EPX70602.1 139 EVRFLMLQILGALKYMHNKRVIHRDLKLGNIMLDESNNVKIGDFGLAALLM-DDEERK-MTICGTPNYIAPEILFNSKegHSFEVDLWSAGVVMYALL 234
                  999999*******************************************94.444444.44555669*********998999***************9 PP

                  TTSSGTTTTSHHHHHHHHH.HTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 200 tlgespypglkneevlekl.kegkrlekpekcpeelyelmkkcweedpeeRptfselve 257
                    g+ p+++ + +++++k+  +++  + +  +++e ++l+ + +++dp+ Rp+  ++ +
   EPX70602.1 235 V-GKPPFQDKEVKTIYKKIkANSYSFPSNIPISSEAKNLIASLLTQDPSVRPSVDDIAN 292
                  9.*****************667899999999**********************999875 PP

>> POLO_box  POLO box duplicated region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.1   0.4   4.3e-21   9.7e-18       1      64 []     493     558 ..     493     558 .. 0.88
   2 !   51.8   0.0   3.2e-17   7.1e-14       1      64 []     597     661 ..     597     661 .. 0.98

  Alignments for each domain:
  == domain 1  score: 64.1 bits;  conditional E-value: 4.3e-21
                 CTTSEEEEEETTS-EEEEETTTEEEEEETTTTEEEEE-T....T--EEEEECCHHC--HHHHHHHHHH CS
    POLO_box   1 stkygigyqLsdgtvgVnFnDhtkiilspdgkavtyidr....qgerstytlsesgcpeelkkkltll 64 
                 s+kyg+gyqLs+ +vgV+FnD t+++ s+d++ ++yi +    + +++ +++s  ++p  lk k++ll
  EPX70602.1 493 SNKYGLGYQLSNESVGVHFNDQTSLVFSADENVIEYITHqknsEAKHTVFSTS--KVPDALKNKIYLL 558
                 79*************************************76555555555555..**********996 PP

  == domain 2  score: 51.8 bits;  conditional E-value: 3.2e-17
                 CTTSEEEEEETTS-EEEEETTTEEEEEETTTTEEEEE-TT--EEEEECCH.HC--HHHHHHHHHH CS
    POLO_box   1 stkygigyqLsdgtvgVnFnDhtkiilspdgkavtyidrqgerstytlse.sgcpeelkkkltll 64 
                 +t+++i+++Ls+gt ++nF Dh k+++sp  + + + d+++e+  +tl+e   + e+l+++l+++
  EPX70602.1 597 RTRQAIMFRLSNGTYQFNFVDHVKVVVSPGVQGIMVLDKEKEKMVFTLEEaCWFTEDLRSRLKYI 661
                 799**********************************************999999********96 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       0.7   1.6e+03      15      45 ..      42      71 ..      32      86 .. 0.73
   2 !   23.5   0.0   1.3e-08   2.9e-05     147     283 ..     141     279 ..      79     284 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.7
  Kinase-like 15 vrgellkkgdrsvvfevkdqetgeplavkvf 45
                  r + +++g++  +f+v+d + g+  a kv 
   EPX70602.1 42 TRYDCIGEGGFARCFRVRDDN-GNIYAAKVI 71
                 56788999***********98.555555554 PP

  == domain 2  score: 23.5 bits;  conditional E-value: 1.3e-08
  Kinase-like 147 lllTlqlirlaanLqakglvhgkftvdnllldekgglmlggft..aLvragtkvvl..sevekgfaPpEllgsrggytrknktkmthkldaWqlGlvi 240
                    l lq++    ++++k ++h +++  n++lde   +++g+f+  aL  + ++ ++    +++  aP  l++s+ g         ++++d W  G+v+
   EPX70602.1 141 RFLMLQILGALKYMHNKRVIHRDLKLGNIMLDESNNVKIGDFGlaALLMDDEERKMtiCGTPNYIAPEILFNSKEG--------HSFEVDLWSAGVVM 230
                  45668999999******************************96446666554444213666677788888888777........79************ PP

  Kinase-like 241 yriwclklPltlateeakeew......kfklckkipekvkaLlkkfLql 283
                  y +   k P++ ++ + + +       +f    +i+ + k L++ +L  
   EPX70602.1 231 YALLVGKPPFQDKEVKTIYKKikansySFPSNIPISSEAKNLIASLLTQ 279
                  *********9876654433222333337766668888888888888765 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.1   2.6e-08   5.8e-05     318     399 ..     150     225 ..      68     234 .. 0.85
   2 ?   -3.7   0.0       1.7   3.8e+03     188     218 ..     555     581 ..     530     606 .. 0.67

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 2.6e-08
  Pkinase_fungal 318 ghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlkgee..HsyrhDLES 399
                     +++ ++ +++++HrD   +Ni++      ++++  + D+ la  l dd+++  + +  GT++++a e+l +++  Hs+  DL S
      EPX70602.1 150 ALKYMH-NKRVIHRDLKLGNIMLD-----ESNNVKIGDFGLAALLMDDEER--KMTICGTPNYIAPEILFNSKegHSFEVDLWS 225
                     566677.9***************9.....56778999*********75444..4689************985568******966 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 1.7
  Pkinase_fungal 188 aelLkkaeergvegvarlvahedveekdddi 218
                       lLk+ ++  v+++ r v++e++     di
      EPX70602.1 555 IYLLKHFKSYMVQNLSRAVQDETLD----DI 581
                     5578888888888888888888875....22 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.1   3.4e-07   0.00077     178     261 ..     107     194 ..      75     222 .. 0.69
   2 ?   -0.4   0.2       0.2   4.4e+02     109     161 ..     548     612 ..     501     646 .. 0.65

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 3.4e-07
  Haspin_kinase 178 fyseqqlflvlllkdkGtdLeev...klkswkqalsifwqivkiLyvaEtkfeFEHRdLhldniLvdknlnvtlidlklsRle..sseg 261
                    f+++++++lvl+l ++ + +e +   kl +  ++  ++ qi+  L+   +k +  HRdL+l+ni++d++ nv + d+ l+ l   ++e 
     EPX70602.1 107 FEDKTNVYLVLELCEHKSLMELLrkrKLLTEPEVRFLMLQILGALKYMHNK-RVIHRDLKLGNIMLDESNNVKIGDFGLAALLmdDEER 194
                    445678889999888877666553335666666666777777777766666.567************************9988653333 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.2
  Haspin_kinase 109 seklssevyqtkekdkevvlKvipl.................evledvtiskelsl.........kelkslklvkgtyp 161
                      +l +++y               l                 e+l+d+ i++  s+          +  +++l +gty+
     EPX70602.1 548 PDALKNKIYL--------------LkhfksymvqnlsravqdETLDDIDIKNAGSMvfmhnylrtRQAIMFRLSNGTYQ 612
                    3333333333..............2444444444444456668899998888888778888888777788888888875 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   6.3e-06     0.014     158     196 ..     150     185 ..     112     187 .. 0.72

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 6.3e-06
                 HH--SSS-EEEE-SS-SGGGEEEC..TTEEEEE---TT- CS
         APH 158 allpgelptvllHgDlhpgNllvdpddgrvtGviDfeda 196
                 al      ++++H+Dl++gN+++d+ ++    + Df++a
  EPX70602.1 150 ALKYM-HNKRVIHRDLKLGNIMLDESNNVK--IGDFGLA 185
                 44443.5799**************776666..6677776 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   4.9e-05      0.11      99     155 ..     119     175 ..     110     192 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 4.9e-05
         Kdo  99 legaqdLedllakwae.laeelkrallkavgrliaklhragvnHadlyaknillqqee 155
                 l + ++L +ll+k +   + e++  +l+ +g + + +h+  v H+dl   ni+l++ +
  EPX70602.1 119 LCEHKSLMELLRKRKLlTEPEVRFLMLQILG-ALKYMHNKRVIHRDLKLGNIMLDESN 175
                 5567899999998666566666666666666.569********************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (676 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       799  (0.0445647); expected 358.6 (0.02)
Passed bias filter:                      558  (0.0311228); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.61u 0.30s 00:00:00.90 Elapsed: 00:00:00.43
# Mc/sec: 4702.96
//
Query:       EPX70603.1  [L=458]
Description: inner membrane protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      3e-96  321.9   0.1    3.9e-96  321.5   0.1    1.1  1  LETM1     LETM1-like protein


Domain annotation for each model (and alignments):
>> LETM1  LETM1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  321.5   0.1  2.2e-100   3.9e-96       1     268 []     103     367 ..     103     367 .. 0.97

  Alignments for each domain:
  == domain 1  score: 321.5 bits;  conditional E-value: 2.2e-100
       LETM1   1 lfpkikkelkhyvkGtkllfadvkisvkllvkllkgkeLsrrEreqlkrttaDllrlvPfsvfiivPfaelllpvllklFPnlLpstFeskkqkeeklk 99 
                 +++++k ++ h+++Gtkll+ ++kis+kl+ k++ g+e++rrE +ql+rt +D+ rlvPfs+f+ivPfaelllp+++klFPnlLpstFe++k+k+ k++
  EPX70603.1 103 MWQRLKGGVLHFWDGTKLLGVEIKISSKLVYKMAVGYEMTRRESRQLTRTLKDIGRLVPFSMFVIVPFAELLLPIAVKLFPNLLPSTFEDPKDKQAKKE 201
                 599************************************************************************************************ PP

       LETM1 100 krlkarlevakfLqetleeslkkkkkekkekaeelkeflkkvrsggepeevsneeilkvaklFkdeltLdnlsrkqlkalckllslqpfgtdnllryrl 198
                 k +k+r++v+ +L++t+++  k + +++++k++e+ +f+ kvr++g  +++s+ee+++v+++Fkd++tLdnlsr+ql alc++++l++fgtd llry++
  EPX70603.1 202 KLRKVRSDVSGVLRDTIKSG-KFTFSDETSKSKEFRDFFLKVRTSG--QSPSREELINVCQYFKDDITLDNLSRAQLIALCRYMNLNAFGTDPLLRYNI 297
                 *****************654.5555566679**************9..679************************************************ PP

       LETM1 199 rkklreikedDkaikreGvdsLseeeLqeacrsRGlraaglseeelreqLeqWlelslkkkvpsslLlLs 268
                 r+++r+i++dD+ai+ eG++sLs+ eL +ac+sRG+r++gls+++l+++++ Wle++ k+ +ps++L+Ls
  EPX70603.1 298 RSRMRQIRRDDRAIYIEGINSLSVPELFNACNSRGIRSQGLSPAKLKDEMSVWLEMRIKHGIPSVILMLS 367
                 ********************************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (458 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       503  (0.0280551); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.30s 00:00:00.82 Elapsed: 00:00:00.45
# Mc/sec: 3063.64
//
Query:       EPX70604.1  [L=933]
Description: MutS protein 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.7e-76  254.8   0.1    1.3e-75  253.5   0.1    1.7  1  MutS_V    MutS domain V
    1.6e-35  123.1   7.1    1.6e-35  123.1   7.1    2.1  2  MutS_III  MutS domain III
    2.4e-19   69.6   0.0    6.3e-19   68.3   0.0    1.8  1  MutS_I    MutS domain I
    1.7e-11   44.6   0.0    3.6e-10   40.3   0.0    2.8  2  MutS_II   MutS domain II
  ------ inclusion threshold ------
      0.055   13.5   0.0       0.24   11.5   0.0    2.3  1  AAA_14    AAA domain
      0.074   13.5   5.7       0.63   10.5   0.0    2.9  3  AAA_23    AAA domain
      0.099   12.4   0.0       0.24   11.1   0.0    1.6  1  AAA_29    P-loop containing region of AAA domain


Domain annotation for each model (and alignments):
>> MutS_V  MutS domain V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  253.5   0.1   5.2e-79   1.3e-75       1     186 [.     742     929 ..     742     931 .. 0.96

  Alignments for each domain:
  == domain 1  score: 253.5 bits;  conditional E-value: 5.2e-79
                 EEEE-STTSSHHHHHHHHHHHHHHHHHT--BSSSEEEEE--SEEEEEE--------SS-HHHHHHHHHHHHHTT--TTSEEEEESTS-SS-HHHHHHHH CS
      MutS_V   1 llitGpnmaGkstylrqvalivllaqiGsfvpaekaeisivdkiftRvgasDdlakgkstFmvEmlEtasilknatekslvilDElGRGtstydGlaia 99 
                 +l+tGpnmaGkst+lrq+a+i++laq+Gsfvpa++aei+ivd+if+R+g++D+l++++stFmvEm+Eta ilknat++s+vi+DE+GRGt++ dGlaia
  EPX70604.1 742 WLLTGPNMAGKSTFLRQNAVISILAQMGSFVPASYAEIGIVDQIFSRIGSADNLYHQQSTFMVEMMETAFILKNATKRSFVIMDEVGRGTTARDGLAIA 840
                 689************************************************************************************************ PP

                 HHHHHHHHHTT--EEEEEES-GGGGGHHHHSTTEE..EEEEEEEEETTEEEEEEEEEES--SS--HHHHHHHTT--HHHHHHHHHHHHH CS
      MutS_V 100 lavaeyllekikaktlfatHyheltklaekleevk..nlhlavkeeeedivflykvkegaaeksyGikvaklaglPesvverArevlke 186
                 + +++yl++ +ka+tlfatH hel++  +++++ k  ++++ v+e++++++f yk++eg++ +s+G+++a++aglP++v+e+A+e l++
  EPX70604.1 841 YGCLKYLCDVNKARTLFATHAHELAEKFRSYKNFKcyCTDIIVDEKTNTFTFDYKIREGVNMRSHGLRIAEVAGLPREVLEAANELLQQ 929
                 ********************************999334566677999*************************************99886 PP

>> MutS_III  MutS domain III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       1.6     4e+03      75      99 ..     231     253 ..     192     317 .. 0.58
   2 !  123.1   7.1   6.3e-39   1.6e-35       1     191 []     348     687 ..     348     687 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 1.6
                 TT---HHHHHHHHHTT---HHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx RF
    MutS_III  75 rrlpDleRllsrislgkakardlka 99 
                  + +D +Rl   ++    +++++  
  EPX70604.1 231 SQTSDSQRLAGDLAR--IQPKEIVL 253
                 344588888877755..56665322 PP

  == domain 2  score: 123.1 bits;  conditional E-value: 6.3e-39
                 HHHHHTTSSS-TTS.SSSS-HHHHH---SSHHHHHHHHHHHH--BS-HHHHHHHHHHHHH.T..TT.HHHHHHHHTT---HHHHHHHHHTT---HHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    MutS_III   1 aTlrnLeilenlrggskegsLlgvldrTvTamGaRlLrewllqPltdleeInaRldaVee.leneelreelrellrrlpDleRllsrislgkakardlk 98 
                 ++++ Lei+++l+++ ++gsLl++++r vT++G+RlL ++l++P+td++eIn+Rld+Ve  +++++lr e+r+ll+r+ D++R+l+r+  ++++a dl+
  EPX70604.1 348 SAMKGLEIRSSLQENRHTGSLLHAIKRSVTKSGTRLLTQRLCSPSTDIAEINRRLDLVEVcIHHDQLRTEIRHLLKRSNDTHRILQRLLMRRGNAYDLL 446
                 589*****9998888889*****************************************88*****************************99*****99 PP

                 HHHHHHHHHHTTTTT---SSTHHHHH...........HHHHHHHHHHB-SS--SSGGGS--B-T................................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx...........xxxxxxxxxxxxxxxxxxxxxxxxxxx................................... RF
    MutS_III  99 allealkaleelvallekeklaesee...........eslaelleeaideeplalekegedlra................................... 151
                  l + ++ ++ +  ll + +++               e la+l++ea+ e +l +++++e+++a                                   
  EPX70604.1 447 GLSNNFSIIKCIESLLTEANSK---TlkpllnafhrhEGLASLISEALNEGALVQKRDEEEKEAediaaestnlseselviagakkripvsenvfkqnf 542
                 9888888665555555444433...13347777776444889999977777777777777777799999****************************** PP

                 ................................................................................................... CS
                 ................................................................................................... RF
    MutS_III 152 ................................................................................................... 151
                                                                                                                    
  EPX70604.1 543 fdiwiikptfnetlkrlhkrierlllsyenlqnilnkkfeskatlrknpsklyyvhikasnnlmlkefmsifpkatvfsttkttanvqlpewsslglel 641
                 *************************************************************************************************** PP

                 ......HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH CS
                 ......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    MutS_III 152 ......iealeqelfqelleeveealerlrrlaealaeLDvllSlA 191
                       i ++e +++q ++++v ++  +lr++a++l+eLD+ +++A
  EPX70604.1 642 estksfIHQEEARVLQIIIDTVLAEHGKLRDTANLLDELDISTAFA 687
                 **********************7778*******************9 PP

>> MutS_I  MutS domain I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.3   0.0   2.5e-22   6.3e-19       2     112 ..      62     175 ..      61     176 .. 0.92

  Alignments for each domain:
  == domain 1  score: 68.3 bits;  conditional E-value: 2.5e-22
                 HHHHHHHCCCHH-TTCEEEEEETTEEEEECHHHHHHHHHCSSSSTT.ESSSSC.EEEEEEEHHHHHHHHHHHHHT.T-EEEEEEE-S-HHHH...S.S- CS
      MutS_I   2 plmkqylelkkkykdavlffrvGdfYelfgeDAviaareleitltkrkkssekeipmagvPehalekylrkLvek.gykVavveqtetpaek...kgvv 96 
                 pl+k ++  +kk  d+vl+ rvG+fYel++++A+    +l++ ++k+k+s+ + ++mag+P  +l++yl+ Lve   + Va+ e +  pa     k++ 
  EPX70604.1  62 PLLKEVKIQQKKFADCVLLTRVGNFYELYFDQAEDLGPVLNLRVSKKKTSHYE-VSMAGFPFFKLDRYLKVLVEDlKKCVALSEEAVRPADDfssKNMY 159
                 6677777778889********************************88877776.********************88999*******99999888889** PP

                 -EEEEEEEBTTC-TTS CS
      MutS_I  97 krevvrviTpGtltde 112
                  r v+rviTpGtl+de
  EPX70604.1 160 TRFVTRVITPGTLIDE 175
                 *************997 PP

>> MutS_II  MutS domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.3   0.0   1.4e-13   3.6e-10      10     125 ..     211     321 ..     201     332 .. 0.63
   2 ?    0.4   0.0      0.29   7.3e+02      37      57 ..     719     739 ..     714     756 .. 0.90

  Alignments for each domain:
  == domain 1  score: 40.3 bits;  conditional E-value: 1.4e-13
                 TTTSE.EEEEEEETTTTEEEEEEEEE-HHHHHHHHHH-ESEEEEESS-SCCCHHHHHHCHCTTT-EEEEE..SCCCCSHCCHHHHCHHHB--STTTTTT CS
     MutS_II  10 regrr.vGlafiDlstgefvvsefedfeeleaeLsrlsPkElllpedlsestaeeessklrelrsrvgvr..etvefesekaserleedfsvedldgfg 105
                 r+++  +Gl+++Dlstgef+ +++ d ++l+ +L+r++PkE++l++ l   +a   ++++ + + +v+++  ++++f+      +   ++++e   + +
  EPX70604.1 211 RNNNIhIGLSWLDLSTGEFFSQTS-DSQRLAGDLARIQPKEIVLDSRLQVTNAHSVLNSIDQNIYFVSYThmQDWSFQ------QWSSYLEKEVDYSYA 302
                 677777*************98866.78********************9766654445555555555544422333333......222233333322222 PP

                 TGGG-HHHHHHHHHHHHHCC CS
     MutS_II 106 lekekklalaAlgalisYle 125
                  e+ ++ + +A ++l+sY+ 
  EPX70604.1 303 -ENCSDIERKAGSTLLSYVS 321
                 .2333334445566666665 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.29
                 HHHHHHHHH-ESEEEEESS-S CS
     MutS_II  37 eleaeLsrlsPkElllpedls 57 
                  l+++L ++ P  +l++++ +
  EPX70604.1 719 GLKNKLLQFTPNDCLVGNSGK 739
                 5899*************9976 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   9.2e-05      0.24       3      83 ..     740     837 ..     738     887 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 9.2e-05
      AAA_14   3 kilvitGaRrvGKTtllkqlikell......vkkesilyinldderd........kkladpe....kllelileklke......ekktylflDEiqevp 77 
                 +i ++tG+  +GK+t+l+q +  ++        + s+ +i + d+ +                   +++ +++e   +       k++++++DE+ + +
  EPX70604.1 740 NIWLLTGPNMAGKSTFLRQNAVISIlaqmgsFVPASYAEIGIVDQIFsrigsadnL-----YhqqsTFMVEMMET--AfilknaTKRSFVIMDEVGRGT 831
                 6889**************99876667777886667777777777666444433221.....02223444444444..133345789999******9886 PP

      AAA_14  78 ewekal 83 
                 ++++ l
  EPX70604.1 832 TARDGL 837
                 665544 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.4     0.014        37     112     192 ..     405     514 ..     346     523 .. 0.66
   2 ?   -2.4   0.1       2.2   5.7e+03     115     165 ..     571     580 ..     526     656 .. 0.65
   3 ?   10.5   0.0   0.00025      0.63      18      36 ..     738     756 ..     718     777 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.014
      AAA_23 112 lei....deleqfisellgskki...ilnlilflgqer...............feefelkdkkerleelekeleeledekkllekl.......eqekek 181
                 +e+    d+l+ +i++ll+++++   il+++l+                     e +++++ ++ l+ l +++   e  ++l+ +        +++ e+
  EPX70604.1 405 VEVcihhDQLRTEIRHLLKRSNDthrILQRLLMRRGNAydllglsnnfsiikcIESLLTEANSKTLKPLLNAFHRHEGLASLISEAlnegalvQKRDEE 503
                 333445689999999999988887775566655555556666665566666654444456777788888888888888888888777778887777777 PP

      AAA_23 182 ekeleeleeel 192
                 eke e++  e 
  EPX70604.1 504 EKEAEDIAAES 514
                 77777765554 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 2.2
      AAA_23 115 deleqfisellgskkiilnlilflgqerfeefelkdkkerleelekeleel 165
                 ++l++++++                                         +
  EPX70604.1 571 ENLQNILNK-----------------------------------------K 580
                 111111111.........................................1 PP

  == domain 3  score: 10.5 bits;  conditional E-value: 0.00025
      AAA_23  18 skgltlItGpNGaGKTTil 36 
                 +k++ l+tGpN aGK+T+l
  EPX70604.1 738 GKNIWLLTGPNMAGKSTFL 756
                 78999************99 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   9.6e-05      0.24      23      39 ..     740     756 ..     727     771 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 9.6e-05
      AAA_29  23 gatlltGpsGsGKSTll 39 
                 ++ lltGp+ +GKST+l
  EPX70604.1 740 NIWLLTGPNMAGKSTFL 756
                 378************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (933 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       691  (0.0385409); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.71u 0.31s 00:00:01.02 Elapsed: 00:00:00.47
# Mc/sec: 5957.63
//
Query:       EPX70605.1  [L=397]
Description: transcription factor TFIID complex subunit Taf7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.8e-55  187.0   0.3    1.8e-55  187.0   0.3    2.0  2  TAFII55_N       TAFII55 protein conserved region
  ------ inclusion threshold ------
      0.039   14.5   2.9        0.1   13.2   2.9    1.6  1  Ribosomal_60s   60s Acidic ribosomal protein
        1.6    8.0  10.2        2.6    7.3  10.2    1.3  1  NOA36           NOA36 protein
        7.6    6.2  12.6          2    8.1   9.2    1.8  2  FAM176          FAM176 family


Domain annotation for each model (and alignments):
>> TAFII55_N  TAFII55 protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  187.0   0.3   4.1e-59   1.8e-55       1     159 [.      75     224 ..      75     225 .. 0.92
   2 ?   -3.5   2.8       1.7   7.6e+03     102     103 ..     330     335 ..     305     366 .. 0.49

  Alignments for each domain:
  == domain 1  score: 187.0 bits;  conditional E-value: 4.1e-59
   TAFII55_N   1 lEeqfiLRlpp.eeaeklreaiesgdvn.kdklsiklekderravvkidgklyaaklvDLPtiiEslKtiDkknlyKtaDisqmllvkeeeeakkeeel 97 
                 +Eeq+iLR++p e++e++r+aie+++++  +++++k+ kd+rravv+++g+ly aklvDLP+iiEs+K++Dkk ++K aD++qmllv+   ++++    
  EPX70605.1  75 IEEQIILRMMPgEDCEYVRKAIENREIGkGADVWVKF-KDQRRAVVHVNGHLYGAKLVDLPCIIESNKSFDKKVIFKAADVCQMLLVTGRIDHENDVL- 171
                 7**************************999*******.*************************************************55544433333. PP

   TAFII55_N  98 eeekskkkkkekkkekkfqyphGitpPlknvrkrRFrkrlkkkeieavekevkrLlraDaea 159
                        +++   k++++ yphG+t P+++vr++RFrkr+++++ieave+ev+rLl+ D++a
  EPX70605.1 172 -------STH--LKQSDYVYPHGLTTPMHWVRQKRFRKRVSNRTIEAVENEVDRLLTMDERA 224
                 .......233..47889*******************************************98 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 1.7
   TAFII55_N 102 s....k 103
                 +    k
  EPX70605.1 330 EtresK 335
                 122220 PP

>> Ribosomal_60s  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   2.9   2.3e-05       0.1      12      81 ..     255     329 ..     251     332 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.3e-05
                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXXXX.XX--S CS
  Ribosomal_60s  12 kaagveveaarvkllvkalegkdieellangaakla.....aaaaaaaaaaaaaaaaaaaeekkkeeeeeEeedd 81 
                    ++agv v ++   +  +++ g d ++l ++++++++      + + a ++ a +++  ++e++++eeee+ e dd
     EPX70605.1 255 QSAGVGVGDQDQRISGDMFDGMDEDDLAGQIEQGMLelsqdTRESTAEPQLAGEESVSDEEDEDEEEEEDNEADD 329
                    677888888888888888899999999999999999999876656666666666666666666666666545555 PP

>> NOA36  NOA36 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3  10.2   0.00057       2.6     217     298 ..     250     335 ..     234     342 .. 0.55

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.00057
       NOA36 217 gyetqetkdlslstrslkfgrqkqadgsddddddeedsdydaylk.alasg...ddeddegdedddddddeedddeeeddedeeee 298
                 +++t ++  + +  + ++   +  ++ ++dd   + ++++ +  + +  s+   +   +e+ +d++d+d+ee++d+e dde+ e++
  EPX70605.1 250 SFDTMQSAGVGVGDQDQRISGDMFDGMDEDDLAGQIEQGMLELSQdTRESTaepQLAGEESVSDEEDEDEEEEEDNEADDETRESK 335
                 56666666666666666666665554444444334444433222202222222244445566666666666666666666666654 PP

>> FAM176  FAM176 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1      0.67     3e+03      93     117 ..     262     286 ..     197     288 .. 0.65
   2 ?    8.1   9.2   0.00044         2      51     114 ..     296     363 ..     289     385 .. 0.51

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.67
      FAM176  93 sefertlsvnvftsaeelerAqRlE 117
                  + ++ +s ++f  ++e ++A  +E
  EPX70605.1 262 GDQDQRISGDMFDGMDEDDLAGQIE 286
                 3334444777888888888887777 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.00044
      FAM176  51 lerlkkkkkklkeesekaseded..eeeeeeeedsseseaeeel...sefertlsvnvftsaeelerAq 114
                 +++++++ +   ees +++eded  eee++e +d+++++  +++   +ef ++l++++ +   ++e A 
  EPX70605.1 296 TRESTAEPQLAGEESVSDEEDEDeeEEEDNEADDETRESK-RQTrlvREFISELETSIQKRKKDAEEAT 363
                 4444444444444444443333300333333333222222.2223446666666666666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (397 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1791  (0.099894); expected 358.6 (0.02)
Passed bias filter:                      766  (0.0427241); expected 358.6 (0.02)
Passed Vit filter:                       102  (0.00568911); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.67u 0.32s 00:00:00.99 Elapsed: 00:00:00.48
# Mc/sec: 2484.57
//
Query:       EPX70606.1  [L=449]
Description: glycerol dehydrogenase Gld1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.4e-50  171.4   0.1      3e-50  171.1   0.1    1.1  1  Fe-ADH        Iron-containing alcohol dehydrogenase
    5.6e-34  118.0   0.3      7e-34  117.6   0.3    1.1  1  Fe-ADH_2      Iron-containing alcohol dehydrogenase
    4.9e-05   22.6   0.8    0.00043   19.5   0.8    2.0  1  DHQ_synthase  3-dehydroquinate synthase


Domain annotation for each model (and alignments):
>> Fe-ADH  Iron-containing alcohol dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  171.1   0.1     5e-54     3e-50       1     364 []      68     409 ..      68     409 .. 0.85

  Alignments for each domain:
  == domain 1  score: 171.1 bits;  conditional E-value: 5e-54
                 -SEEEEETTGGGGHHHHHTTT-..EEEEEEEHHHH.HH.THHHHHHHHHCTT-EEE.E.EEE-S---HHHHHHHHTTS-TT.--EEEEEESHHHHHHHH CS
      Fe-ADH   1 Ptrivfgkgaleelgellkklgakralivtdkgslkksglldkvlesleeagievt.vfdgvepnptleeveeaaalareegadvviavGGGsviDtAK 98 
                 P+++ +g++ +++  +++k+  +++a++++d++++  +  + ++++sle++g++vt +   + ++ +l+e++++ a + +   ++vi+vGGG++iDtAK
  EPX70606.1  68 PQKYAQGRNIFNRSFTYVKNWATDSAVVLADPNIW--NICAPTIVNSLESNGMKVTkL--IFGGESSLKEIHRLQAECPSD-SQIVIGVGGGKTIDTAK 161
                 89********************9***********9..5599***************43..3579**************775.6**************** PP

                 HHHHHTT..................--EEEEESS-S-S-TT-SEEEEE.-TTS..EEEEE-..SS--SEEEEEHHHHHHS-HHHHHHHHHHHHHHHHHH CS
      Fe-ADH  99 aialllanpevedylgegkakkkkalpliaiPTtaGtGsevtplavitdeeeg..eklsifdpellPdlaivDpeltltlPkrvtaatglDalahalEa 195
                 ++a  ++                  +p+i+ PTta++++ + +l+vi+ ++eg  +k+s++  +++P+++ vD+++++++P r+++++++Dal++++E 
  EPX70606.1 162 YLANEMR------------------VPCIVAPTTASSDAATASLSVIY-TSEGefQKYSFY--PTNPNFIMVDTDVIVKAPVRFLISGIGDALSTYVET 239
                 ******9..................9**********************.555547888998..************************************ PP

                 HHHHT---TTS.............SB--HHHHHHHHHHHHHHHHHHHH.....HHHHHHHHHHHH.HHHHHHSS---HHHHHHHHHHC.CGGGGGS-HH CS
      Fe-ADH 196 yvskkanplsd.............alaleairliaknleravadgedl.....eareqmllastl.aglafsnaglgavHalahalgalfgiphglana 275
                     +++ ls              ++++e i+ +a +   +      l     ea e  ++a+tl +gl+f+n+ l+a+Ha++++l+  +g  h l+++
  EPX70606.1 240 ESILRSHSLSFaggvptiagaaiaRACKETIEKFAVAGILSN-----LrgvctEAFEHTVEANTLlSGLGFENGNLAAAHAIHNGLTTAHGNIHRLMHG 333
                 988544444442222221121111233333333333333333.....355555***********************************99999****** PP

                 HHHHHHH..........HHHHHHT.......T--HHHHHHHHHHHHHTT---SHHHHT...-TT-HHHHHHHHHT-T.SGGGGSSS---HHHH CS
      Fe-ADH 276 illpavlrfnaeaaperlaqlaralggesdeeaaeeliealrellkelglptsLselg...vdeedldklaeaalkd.rslannpreltaedv 364
                 +++++++          l ql  +       +++ e+   +  ++++++lp++L+elg   v++e+l  + +a+l++ +s++n+ +++t++d+
  EPX70606.1 334 EKVAYGT----------LTQLILE-------NRPLEEYYSMVSFMSKCHLPVTLEELGipfVTDEELLMIGRATLRPdESIHNMSKKFTPQDI 409
                 *******..........9999999.......9**************************43334569***********************9986 PP

>> Fe-ADH_2  Iron-containing alcohol dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.6   0.3   1.2e-37     7e-34       3     250 .]      74     337 ..      72     337 .. 0.83

  Alignments for each domain:
  == domain 1  score: 117.6 bits;  conditional E-value: 1.2e-37
    Fe-ADH_2   3 gegaleklgellkelelkkvllvadentkkaagekveeslkeagikvevveeveeeadleeveklvealreketdlvvavGgGtiiDiakyvsaklnvp 101
                 g+++ ++   ++k+ + + ++++ad n++++ +  + +sl+++g+kv+ +  + +e++l+e+ +l+++   ++ ++v++vGgG+ iD+aky++ + +vp
  EPX70606.1  74 GRNIFNRSFTYVKNWATDSAVVLADPNIWNICAPTIVNSLESNGMKVTKLI-FGGESSLKEIHRLQAECP-SDSQIVIGVGGGKTIDTAKYLANEMRVP 170
                 5788999999*************************************8665.89*************996.99************************** PP

    Fe-ADH_2 102 yvsvpTaaSvDGfaspgaslvvd...gkkrtvakaaaPlaviaDldvlaeAPrrllasGvGDllgkytaladwklan..........evseplaklsaa 187
                  ++ pT+aS D  +++ + +++     +k ++++ + P  +++D+dv+ +AP r+l sG+GD+l+ y+ +     ++           + + +a++  +
  EPX70606.1 171 CIVAPTTASSDAATASLSVIYTSegeFQKYSFYP-TNPNFIMVDTDVIVKAPVRFLISGIGDALSTYVETESILRSHslsfaggvptIAGAAIARACKE 268
                 ********************99874335667766.59*******************************9987766665555664443223344444444 PP

    Fe-ADH_2 188 mvqeaa.eklvedkke..tealeelleal.alsgigisrpaSGsEHliSHaldmlal..kqalHGeqVG 250
                 +++++a + ++++ +   tea e+ +ea  +lsg+g+++    + H i   l  ++   ++ +HGe+V+
  EPX70606.1 269 TIEKFAvAGILSNLRGvcTEAFEHTVEANtLLSGLGFENGNLAAAHAIHNGLTTAHGniHRLMHGEKVA 337
                 44443302233333324488888888885599****************99999998776899*****96 PP

>> DHQ_synthase  3-dehydroquinate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.8   7.2e-08   0.00043      30     245 ..     144     373 ..     129     388 .. 0.73

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 7.2e-08
                   TT-EEEEEESHHHHHHHHHHHHHBTT--EEEEEE-SHHHHHTTTSSSEEEEEETTEEEEEEEE-..--SEEEEEGGGGGGS-HHHHHHHHHHHHHHH CS
  DHQ_synthase  30 RksllialGGGvvgDlaGfvAatylRGvrfvqvPttllaqvDssvGgKtainlplgKNliGafa..qPkavlidlevLktLperelraGlaEviKya 124
                    ++++i +GGG   D a + A  + R v ++  Ptt  a  D++      i +++g     +f+  +P+++++d++v+   p r l++G+++++ + 
    EPX70606.1 144 DSQIVIGVGGGKTIDTAKYLANEM-R-VPCIVAPTT--ASSDAATASLSVIYTSEGEFQKYSFYptNPNFIMVDTDVIVKAPVRFLISGIGDALSTY 236
                   567899**************9875.5.9*******9..889****************9999**8556*************************99765 PP

                   HHT-HHHHHHHHHHHHHHHC...........TTTHHHHHHHHHHHHHHHHHHHHHCCTTTTGGGG.......GGTTH.HHHHHHHHHHTT.....TT CS
  DHQ_synthase 125 likdeelfelleenaeallk...........eeeeealeeliarsievkaevveeDekekglral.......LnlGH.tigHaiEallgy.....ek 197
                   + + e++   l++++ +++            +  +e++e++  + i    + v ++  e+ + a         + G    +Hai + l++     ++
    EPX70606.1 237 V-ETESI---LRSHSLSFAGgvptiagaaiaRACKETIEKFAVAGILSNLRGVCTEAFEHTVEANtllsglgFENGNlAAAHAIHNGLTTahgniHR 329
                   4.44444...344443333355567776666445566666666677777777777777765544333444332223224567777665554555689 PP

                   S-HHHHHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHHHTT---STTTT CS
  DHQ_synthase 198 llHGeaVaiGmvlaaelseklgllkkeeverllkllkklglpvslkel 245
                   l+HGe Va+G ++++ l ++      ee+ +++++++k++lpv+l+el
    EPX70606.1 330 LMHGEKVAYGTLTQLILENRP----LEEYYSMVSFMSKCHLPVTLEEL 373
                   9***********999998665....35678899999999999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (449 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       362  (0.0201908); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.68u 0.38s 00:00:01.06 Elapsed: 00:00:00.57
# Mc/sec: 2375.97
//
Query:       EPX70607.1  [L=317]
Description: endosomal sorting protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.4e-13   48.5   0.0    1.5e-12   47.7   0.0    1.4  1  Vta1        Vta1 like
    3.9e-11   42.4   3.4    6.4e-11   41.8   0.4    2.6  3  Vta1_C      Vta1 C-terminal domain


Domain annotation for each model (and alignments):
>> Vta1  Vta1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.7   0.0   1.7e-16   1.5e-12       1      58 [.      15      71 ..      15     105 .. 0.80

  Alignments for each domain:
  == domain 1  score: 47.7 bits;  conditional E-value: 1.7e-16
        Vta1  1 siapflkrakelekadpvvaYycrlyaveqilkkklkrkdkeakefltkLldklEqlK 58
                si++f++r +el+k +pv+aY+c ++a++ +l++     ++ +++fl++L ++lE++ 
  EPX70607.1 15 SIRNFIQRYNELNKYNPVIAYWCLYWAAQVGLSNSTG-LTNTCRDFLLNLVERLETFC 71
                599******************************6665.555**************873 PP

>> Vta1_C  Vta1 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.25   2.3e+03      27      38 .]     174     185 ..     174     185 .. 0.86
   2 ?   -0.3   0.0     0.098   8.8e+02      20      29 ..     230     239 ..     229     239 .. 0.88
   3 !   41.8   0.4   7.1e-15   6.4e-11       3      38 .]     281     316 ..     280     316 .. 0.94

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.25
      Vta1_C  27 iknLqeALklLt 38 
                 i+ Lqe+L+ Lt
  EPX70607.1 174 IDRLQESLSKLT 185
                 678*****9887 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.098
      Vta1_C  20 YeDvetAikn 29 
                 ++D  tA+++
  EPX70607.1 230 FDDSTTAVSE 239
                 9******985 PP

  == domain 3  score: 41.8 bits;  conditional E-value: 7.1e-15
      Vta1_C   3 qiaeAqKhaKfAiSALqYeDvetAiknLqeALklLt 38 
                  i+ A+ ha++A+SAL+Y+D  tAi +L+ AL lL+
  EPX70607.1 281 RIEAARGHARYAYSALDYDDSATAIFHLKSALGLLE 316
                 6889999**************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (317 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1087  (0.060628); expected 358.6 (0.02)
Passed bias filter:                      488  (0.0272185); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.34s 00:00:01.01 Elapsed: 00:00:00.56
# Mc/sec: 1691.62
//
Query:       EPX70608.1  [L=362]
Description: thioredoxin family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.1e-23   81.7   0.0    1.1e-19   70.4   0.0    2.5  2  Thioredoxin    Thioredoxin
      8e-08   32.4   2.1      6e-05   23.0   0.1    2.8  3  Thioredoxin_6  Thioredoxin-like domain
    9.8e-08   32.4   0.8    1.3e-06   28.8   0.2    2.9  2  Thioredoxin_2  Thioredoxin-like domain
    0.00025   21.0   0.0    0.00051   19.9   0.0    1.6  1  AhpC-TSA       AhpC/TSA family
     0.0012   18.8   0.0      0.011   15.5   0.0    2.3  2  TraF           F plasmid transfer operon protein
      0.002   18.3   0.2        0.1   12.8   0.1    2.4  2  Glutaredoxin   Glutaredoxin
     0.0022   17.4   0.2     0.0022   17.4   0.2    1.9  2  OST3_OST6      OST3 / OST6 family, transporter family
     0.0056   17.0   1.7       0.28   11.5   0.1    3.6  3  Thioredoxin_8  Thioredoxin-like
     0.0099   15.6   0.0      0.019   14.7   0.0    1.5  1  Redoxin        Redoxin
  ------ inclusion threshold ------
      0.024   14.8   0.1      0.063   13.5   0.1    1.8  1  Thioredoxin_7  Thioredoxin-like
      0.033   14.0   0.0       0.08   12.7   0.0    1.6  2  Thioredoxin_9  Thioredoxin


Domain annotation for each model (and alignments):
>> Thioredoxin  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.4   0.0   6.5e-23   1.1e-19       4      83 ..      32     112 ..      29     138 .. 0.77
   2 !    9.0   0.0   0.00083       1.4      68     102 ..     209     244 ..     176     245 .. 0.79

  Alignments for each domain:
  == domain 1  score: 70.4 bits;  conditional E-value: 6.5e-23
                  ESSHHHHHHHHTTTSSEEEEEEE-TTSHHHHCHHHHHHHHHHHCTTTSEEEEEETT..TSHHHHHHTT-SSSSEEEEEETTE CS
  Thioredoxin   4 vltkenFeeevakekklvlveFyApwCghCkalaPeleklaeelkdkvklakvdvd..enedlakkyevegiPtlklfkngk 83 
                  +l +++  + v + + + +v FyApwCg Ck+l P + kla++l++ v +a v++d  +n++++++y+v+g+Pt+k++  + 
   EPX70608.1  32 ELGTKTLSKYVHQ-HGPTFVVFYAPWCGYCKKLGPIFSKLANKLHNLVPFAAVNCDleSNKKVCSRYNVRGFPTIKFLFPSP 112
                  5667778889999.********************************777776666533899***************975554 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00083
                  TT-SSSSEEEEEETTE.EEEEEESS-HHHHHHHHHH CS
  Thioredoxin  68 yevegiPtlklfkngk.evkkyegarekeklaaflk 102
                   ev+ +Ptl+l + ++ ++  y g+ e++++++f++
   EPX70608.1 209 EEVTEFPTLLLQHPDQkYPTLYRGSMERDAIKTFIE 244
                  68*********9988879999************997 PP

>> Thioredoxin_6  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.0   0.00094       1.5      78     154 ..      29     104 ..      24     109 .. 0.80
   2 !   23.0   0.1   3.7e-08     6e-05      11     184 .]      66     245 ..      61     245 .. 0.80
   3 !   13.8   0.2   2.5e-05     0.041      11     104 ..     178     271 ..     170     290 .. 0.67

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00094
                    SEEE-SHHHHHHHHTSS--EEEEEEE-TTSTTHHHHHHHHHHHHHHTTTT-EEEEEETT..GGHHHHHHTT--GGG-SE CS
  Thioredoxin_6  78 lvreltpenaeelfeeglppllllflkkddeeteklkkaiekvakefkdkinfaladak..sfkrpleylglsssdlPv 154
                    +  el  +++ ++ ++  p ++++f+       +kl  +++k+a+++++ + fa ++++  s+k+++++++++    P+
     EPX70608.1  29 NTVELGTKTLSKYVHQHGP-TFVVFYAPWCGYCKKLGPIFSKLANKLHNLVPFAAVNCDleSNKKVCSRYNVR--GFPT 104
                    5678889999999999988.55666644343447777789********************999******9998..5555 PP

  == domain 2  score: 23.0 bits;  conditional E-value: 3.7e-08
                    HHHHHTTT-T.TSEEEEE-.....-HHHHHHTT--S.SEEEEEE.....TTTTEEEEEETHT--HHHHHHHHHHH-.--SEEE-SHHHHHHHHTSS CS
  Thioredoxin_6  11 iFekvakelkgdvrfgvtk.....skevadklgvke.pavllfr.....kfdeekvkydgekitvddlkkfiekns.lplvreltpenaeelfeeg 94 
                    iF+k a++l++ v f++++     +k+v++ ++v++ p++++       + +   ++y+g+  ++ ++ kf+++n  +   +  ++ ++ ++++++
     EPX70608.1  66 IFSKLANKLHNLVPFAAVNcdlesNKKVCSRYNVRGfPTIKFLFpsplqPSTVFSADYEGD-RSYGNMYKFVSQNYpVTITPIRNDPQMRKYMNSR 160
                    8*********88****995333336779999*****9***988844444456666667776.8*********988526668899999********* PP

                    --EEEEEEE-TTSTTHHHHHHHHHHHHHHTTTT-EEEEEETTGGHHHHHHTT--G...GG-SEEEEEESSSS-EEEETTSS--HHHHHHHHHH CS
  Thioredoxin_6  95 lppllllflkkddeeteklkkaiekvakefkdkinfaladaksfkrpleylglss...sdlPvivivdsashkykyppkdefspeklkeFlkd 184
                     +++ ++++    +e++k+  +++ +a+ f++ + f+++  +  k  l  lg++    ++ P++  +++ ++ky ++++++++ +++k F+++
     EPX70608.1 161 TNVTKVILI----TEKSKATITYKTLANYFSK-LPFSISSPD--KISLGTLGIDPeevTEFPTLL-LQHPDQKYPTLYRGSMERDAIKTFIEN 245
                    764444444....3456666667778866666.9******99..9999999999988899*****.8889********************986 PP

  == domain 3  score: 13.8 bits;  conditional E-value: 2.5e-05
                    HHHHHTTT-T.TSEEEEE--HHHHHH.......TT--S.SEEEEEETTTTEEEEEETHT--HHHHHHHHHHH---SEEE-S.HHHHHHHHTSS--E CS
  Thioredoxin_6  11 iFekvakelkgdvrfgvtkskevadk.......lgvke.pavllfrkfdeekvkydgekitvddlkkfieknslplvrelt.penaeelfeeglpp 97 
                    +++  a++++ ++ f +++ ++  +         +v+e p++ll +++ + ++ y g+ ++ d +k+fie++  ++    + +e+++ + + +  +
     EPX70608.1 178 TYKTLANYFS-KLPFSISSPDK-ISLgtlgidpEEVTEfPTLLLQHPDQKYPTLYRGS-MERDAIKTFIENQLKEF----SfSEYLDSFCTRQ--N 264
                    7788888887.88888776444.2233444455666666********99999999998.8**********997654....4223455554444..4 PP

                    EEEEEE- CS
  Thioredoxin_6  98 llllflk 104
                     ll f++
     EPX70608.1 265 CLLHFYD 271
                    5666665 PP

>> Thioredoxin_2  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.8   0.2     8e-10   1.3e-06       4      87 ..      44     108 ..      42     119 .. 0.81
   2 ?    0.7   0.0      0.42   6.9e+02      77     104 ..     210     238 ..     132     243 .. 0.79

  Alignments for each domain:
  == domain 1  score: 28.8 bits;  conditional E-value: 8e-10
  Thioredoxin_2   4 ngkpvlvvftdpdCpyCkklkkelkelddvtvrvllfplkpsfepkavaiwcakekkkafkdieenvelarkygvrgtPtivfl 87 
                    ++ p++vvf++p+C+yCkkl   +++l     +     l++ + ++av+ + + +k           ++  +y+vrg+Pti fl
     EPX70608.1  44 QHGPTFVVFYAPWCGYCKKLGPIFSKL---ANK-----LHNLVPFAAVNCDLESNK-----------KVCSRYNVRGFPTIKFL 108
                    688*******************99999...333.....667766666666666666...........59***********9875 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.42
  Thioredoxin_2  77 gvrgtPtivfldgk.eivarlpGyvpaee 104
                    +v+++Pt+++  ++ +  + ++G + ++ 
     EPX70608.1 210 EVTEFPTLLLQHPDqKYPTLYRGSMERDA 238
                    68899998877777666677778776665 PP

>> AhpC-TSA  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   3.1e-07   0.00051      13      81 ..      31      98 ..      19     143 .. 0.81

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 3.1e-07
                TTCEEEECHHH..TTSEEEEEEESTST-CCHHHHHHHHHHCHHHCCCTTEEEEEEESSSCHHHHHHHHH-H CS
    AhpC-TSA 13 adgetvslsdy..kgkpvvlffypkdwcpvCttelpalaklyeefkergvevigvsvdspeshkkfiekes 81
                 + +t++ls+y  +  p+ ++fy+  wc +C++  p ++kl++++++  v   +v++d +   kk + +++
  EPX70608.1 31 VELGTKTLSKYvhQHGPTFVVFYAP-WCGYCKKLGPIFSKLANKLHN-LVPFAAVNCDLES-NKKVCSRYN 98
                4668999****98557*********.*******************94.4788888887655.555555555 PP

>> TraF  F plasmid transfer operon protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   6.9e-06     0.011     122     197 ..      36     106 ..      16     118 .. 0.77
   2 ?    0.4   0.0      0.29   4.8e+02     190     217 ..     211     237 ..     191     243 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 6.9e-06
        TraF 122 aalkklakeyg..LlfFyrgkcpyceaqapilqafadkyglev..raVsvdgrplpelpnarvdkgqaarlgvkrtPalv 197
                 ++l+k  +++g  +++Fy++ c+yc+++ pi +++a+k +  v   aV++d + ++++ +         r++v+ +P++ 
  EPX70608.1  36 KTLSKYVHQHGptFVVFYAPWCGYCKKLGPIFSKLANKLHNLVpfAAVNCDLESNKKVCS---------RYNVRGFPTIK 106
                 6677777777666899**********************9855522677777777766666.........88888888875 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.29
        TraF 190 vkrtPalvlvdpksqkvvpvaaGllsld 217
                 v+++P+l+l +p+ qk+  +  G +  d
  EPX70608.1 211 VTEFPTLLLQHPD-QKYPTLYRGSMERD 237
                 799*******999.77666666666555 PP

>> Glutaredoxin  Glutaredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.1   6.3e-05       0.1       2      53 ..      50     105 ..      49     107 .. 0.81
   2 ?    2.9   0.0     0.078   1.3e+02      23      50 ..     139     166 ..     135     166 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 6.3e-05
                   EEEESTSSHHHHHHHHHHHHTT......GGEEEEEGCCSHHHHHHHHHHHTSSSSSEE CS
  Glutaredoxin   2 vlftkptCpyCkkakrlLkelg......vkfeeidvdkdeeireelkelsgvrtvPqv 53 
                   v+f  p+C+yCkk   ++ +l       v+f+ ++ d +    +++ ++ +vr +P++
    EPX70608.1  50 VVFYAPWCGYCKKLGPIFSKLAnklhnlVPFAAVNCDLE--SNKKVCSRYNVRGFPTI 105
                   78999*************888878888999******995..44444455588888887 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.078
                   TGGEEEEEGCCSHHHHHHHHHHHTSSSS CS
  Glutaredoxin  23 gvkfeeidvdkdeeireelkelsgvrtv 50 
                   + ++++  + +d+++r+++ ++++v +v
    EPX70608.1 139 NYPVTITPIRNDPQMRKYMNSRTNVTKV 166
                   667788899*************998776 PP

>> OST3_OST6  OST3 / OST6 family, transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   1.9         2   3.2e+03     266     280 ..       5      19 ..       2      25 .. 0.80
   2 !   17.4   0.2   1.3e-06    0.0022      46     173 ..      57     177 ..      43     193 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 2
   OST3_OST6 266 vivllvlifllfsll 280
                 v+++l+l+f+lfsl 
  EPX70608.1   5 VFIWLFLFFFLFSLS 19 
                 789999999999975 PP

  == domain 2  score: 17.4 bits;  conditional E-value: 1.3e-06
   OST3_OST6  46 CelCrefepefelvakswrkdekskskklfFakvdfdegkdvFqklglnsaPhl.llfppkkgpkeskkkdtydfsrggf.daealakfisertg.vki 141
                 C  C+++ p f+++a+  ++           ++ d++ +k+v ++++++  P + +lfp+  +     ++  +  + +g+ +  ++ kf+s++ + +  
  EPX70608.1  57 CGYCKKLGPIFSKLANKLHNL-----VPFAAVNCDLESNKKVCSRYNVRGFPTIkFLFPSPLQ-----PSTVFSADYEGDrSYGNMYKFVSQNYPvTIT 145
                 999***************999.....245555667788***************9445555333.....4444555555555999***********6667 PP

   OST3_OST6 142 rikrppnyskiiitallvlllvlllklrrkll 173
                 +i+ +p++ k++++ + v+ ++l+  +++  +
  EPX70608.1 146 PIRNDPQMRKYMNSRTNVTKVILITEKSKATI 177
                 89999******999999999999888877766 PP

>> Thioredoxin_8  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   0.1   0.00017      0.28       4      51 ..      48      91 ..      46     111 .. 0.81
   2 ?    0.9   0.1      0.36   5.9e+02      71      82 ..     154     165 ..     125     226 .. 0.48
   3 ?   -1.2   0.0       1.6   2.6e+03      57      88 ..     259     293 ..     228     300 .. 0.60

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00017
                   EEEEE--SSSHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-SS-HHHHH CS
  Thioredoxin_8  4 vlLyfgaswcppckaftpklkelyeklkkkkkveivyvsldkkeeefe 51
                   ++++f+a wc  ck+  p  ++l +kl+  + v + +v++d +  +++
     EPX70608.1 48 TFVVFYAPWCGYCKKLGPIFSKLANKLH--NLVPFAAVNCDLE--SNK 91
                   7899***********************9..8999999999942..333 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.36
                    HHHHTT-S--TT CS
  Thioredoxin_8  71 rnklkkkynvka 82 
                    r+ ++++ nv++
     EPX70608.1 154 RKYMNSRTNVTK 165
                    333333333332 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 1.6
                    S..-TTSEE.EE-TT-.HHHHTT-S--TT-SEEEE CS
  Thioredoxin_8  57 n..kkpwlsvpfddkk.rnklkkkynvkaiPtlvv 88 
                       ++++l + +d+++ ++++     +k++P+l +
     EPX70608.1 259 FctRQNCLLHFYDNEQeKEAFPADNITKKYPKLRL 293
                    33333555555555542555555555555666655 PP

>> Redoxin  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   1.2e-05     0.019      20      71 ..      35      86 ..      27     138 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.2e-05
                EEEHHH..HTTSEEEEEEESTTT-HHHHHTHHHHHTHHHHHHCSTTTEEEEEES CS
     Redoxin 20 svslse..fkgkkvvvnfvpgafcPtCsaehpyleklaellkekgvdvvavvad 71
                + +ls+   + ++++v+f++  +c++C++  p + kla++l++  v + av++d
  EPX70608.1 35 TKTLSKyvHQHGPTFVVFYAP-WCGYCKKLGPIFSKLANKLHNL-VPFAAVNCD 86
                66788876677889*******.*******999*****8885554.666666665 PP

>> Thioredoxin_7  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.1   3.8e-05     0.063      16      83 .]      44     110 ..      36     110 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 3.8e-05
                    HT--EEEEE--TT-HHHHHHHHHHHH-HHHHH.HHHT-EEEEESS--S-GGG.-TT---SSEEEEE-T CS
  Thioredoxin_7  16 rgkpvlvffgaswcftCqalerdflsdeevkaalaekfvllrvdvterdanileldeqgvPvvafldp 83 
                    ++ p +v+f a wc++C++l   f +   +k      f+ ++ d +++++   ++  +g+P++ fl p
     EPX70608.1  44 QHGPTFVVFYAPWCGYCKKLGPIFSKL-ANKLHNLVPFAAVNCDLESNKKVCSRYNVRGFPTIKFLFP 110
                    67799**************98777555.3444234667777777777777553333377888777765 PP

>> Thioredoxin_9  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   4.9e-05      0.08      40      70 ..      44      74 ..      29     105 .. 0.75
   2 ?   -3.1   0.0       3.8   6.2e+03      73      84 ..     163     174 ..     148     213 .. 0.54

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 4.9e-05
                   -S-EEEEEE--TT-HHHHHHHHHHHHHHHH- CS
  Thioredoxin_9 40 ekklkilvltedwCgDaavnvPvlakiaeln 70
                   +   +++v+ ++wCg +    P++ k+a+  
     EPX70608.1 44 QHGPTFVVFYAPWCGYCKKLGPIFSKLANKL 74
                   4456899********************9654 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 3.8
                    EEEEEE-HHHHH CS
  Thioredoxin_9  73 ievkillrdenl 84 
                    ++  il+ ++ +
     EPX70608.1 163 VTKVILITEKSK 174
                    222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (362 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       578  (0.0322383); expected 358.6 (0.02)
Passed bias filter:                      470  (0.0262145); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.69u 0.36s 00:00:01.04 Elapsed: 00:00:00.57
# Mc/sec: 1908.66
//
Query:       EPX70609.1  [L=810]
Description: exocyst complex subunit Sec10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   4.6e-150  501.4   6.9   6.5e-150  500.9   6.9    1.1  1  Sec10          Exocyst complex component Sec10
  ------ inclusion threshold ------
      0.015   15.8   1.4        1.5    9.3   0.1    2.4  2  T3SSipB        Type III cell invasion protein SipB
      0.025   14.3   0.8      0.058   13.2   0.8    1.6  1  Fibin          Fin bud initiation factor homologue
      0.043   14.2   1.1       0.78   10.2   0.1    3.5  4  IMPa_helical   Immunomodulating metalloprotease helical domai
      0.062   13.2   1.2       0.15   11.9   0.3    2.1  2  HEPN_Toprim_N  HEPN/Toprim N-terminal domain 1
       0.15   12.1   0.0        1.2    9.2   0.1    2.3  2  Nuc_recep-AF1  Nuclear/hormone receptor activator site AF-1
       0.62    9.4   6.8          1    8.8   2.6    2.5  2  FliD_C         Flagellar hook-associated protein 2 C-terminus


Domain annotation for each model (and alignments):
>> Sec10  Exocyst complex component Sec10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  500.9   6.9  2.5e-153  6.5e-150       2     703 ..     101     791 ..     100     798 .. 0.92

  Alignments for each domain:
  == domain 1  score: 500.9 bits;  conditional E-value: 2.5e-153
       Sec10   2 qevvdsfnqLddkisevgqtavklgeqLesadkqrqraseaaeLiefykeflssgetsklellfkkskdpekklkaAqiarkLlaiskeldelekaent 100
                  +v+d +++L+d+++++    v++g++Le a++ r+r + +a+Li++y+ef+s  + ++l++l  ++++++k+l +Aq +r+Ll +++e+ +l++a++t
  EPX70609.1 101 SQVLDLSRNLNDNVDDMKGGLVDVGKELELAENHRKRILASADLIQYYMEFRSGNS-QSLSDL-FRTNNHDKMLLCAQRTRQLLGFANEV-DLPGASET 196
                 689999********************************************777665.******.6667777*******************.******** PP

       Sec10 101 rekiekyaerlEkelLkeFdkayrkedfermkeiAkvLqefnggasvvqlfvnqhdffidkdkldeangiesseiwekladpdeapskveeslqalfse 199
                  ++iek++e lE+ +Lk F+++yrk ++++m+++ ++Lqefnggasv++ fvnqh+ffi++dkl++++g+e++++w+ l+dp +  + + +sl++lf+e
  EPX70609.1 197 LNRIEKFSEFLETSFLKFFNNEYRKPNWKGMASFGTILQEFNGGASVIREFVNQHEFFIAADKLESRKGLEEDDVWNALQDPFQPVPASIKSLSSLFNE 295
                 *************************************************************************************************** PP

       Sec10 200 iretvkeeaeiikrVFpnpekVmqtFlqrvfaqviqqrlealLdkassisqlayLraLhslysstlkLvkdLkeylsteeidgssa..lsalLdqsvee 296
                 i+++v +++ +ikrVFp+pe V+qt++qr+f q+iq+r+e++++ a+s  +layLr+L+++ ss+++L+ +Lke+l+ ++++ s++  l  +L+q++e+
  EPX70609.1 296 ICSVVDRDCVVIKRVFPKPELVLQTLCQRIFGQSIQNRIEEVMEVAHSKTNLAYLRSLQTIVSSLQELLVQLKEILTRRGFNVSDNspLILALNQYFED 394
                 ***************************************************************************9999999998889*********** PP

       Sec10 297 lFvpylegdsYlerEkksLeelyaellskFttlheqsasakslknkvkkklatsfkaslsasklaassktkqinraasstlskskkr.aelketaats. 393
                 l vpy+e ++Yl rE++sL++++   + kF        +   +k++ k  l++s ++ +    ++ + +++ i++  s++ +    r a++ ++   s 
  EPX70609.1 395 LLVPYVEPNDYLSRERHSLTSMFWLNVYKFL-------AVNPFKQRAKPGLLRSLMNPI----QQPKVQSADIQTHFSAKTEGYLLRiAGIDSSLIDSg 482
                 ******************************9.......344455566666666655555....444444555444444444444444445555555556 PP

       Sec10 394 akaaknedeleeedsllslevaesllkwaaeslgRaveLsspsevpkaveallelLlsalgkeYvetaLdaalaaltaqeiaektevpdlsflevvrsv 492
                 a++++n+ +++e++++l  +   s++ w+ae+l+Ra    s+++++k +++l++lL + + ++Y+ ++L  ++  +++ +  ++t+  dlsfl  +r++
  EPX70609.1 483 AVISENTFSISENEGHLDSKNTYSFIGWHAEALNRAFLVTSQQDLSKILFSLVKLLDELVNNRYINEGLSLVHNYIQQYD--KRTD-LDLSFLIDIREC 578
                 899*******************************************************************9999999999..8899.9*********** PP

       Sec10 493 dliisllqvyiktillpllsdspdirremvkeknsflsrlEekvnaglqktidvvvgeveyllskqkknDFrpknddla.merqpTeaCkeivefLssv 590
                 ++i+   ++yi++i++p +  + ++r+e+++  + ++++lE +vn ++   +++++++++ lls  +  ++ + +++++   +q     k + ++L ++
  EPX70609.1 579 KKIMGFYSAYITSIIIPSVGFTASSRKETINTLSLAITNLEHRVNSLFYTSVKALCSRLDLLLSPYRNISYAMSEEQIDvSPKQRQSMTKMVQTYLDQL 677
                 ******************************************************************************952344444556677789999 PP

       Sec10 591 hsalkesls.gsnlesflteiGlrlhklLleHlkkftvsseGGlmltkDlneYqdavksfkipelsekFelLrelgnlfiVqpevlkslvregalakld 688
                  s+++e    +  l ++  + +l+l ++L+e+ ++ +v ++G+l+l+ Dln ++++++s++i+ +++kF +L++l +l++V+ +vl  +++++++a+++
  EPX70609.1 678 LSSIQELDPnDPSLFALKKKTALNLAAVLIEFAFRSKVTPTGALLLQDDLNFFYSVLQSWGIDIVNNKFRTLQQLLSLLMVKTDVLPAVMQDKRKAGFT 776
                 999888755799*************************************************************************************** PP

       Sec10 689 relireyiqrReDyk 703
                  ++i+e +++R+D  
  EPX70609.1 777 DMNIHEVLRLRSDLP 791
                 *************86 PP

>> T3SSipB  Type III cell invasion protein SipB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.2     0.012        30      20      83 ..      47     110 ..      36     143 .. 0.75
   2 ?    9.3   0.1   0.00057       1.5      69     105 ..     660     696 ..     632     704 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.012
                 HHHHHHHHHHHHHHHHHTTTTT----STHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     T3SSipB  20 LsqLenrlaawkamskaqqeaasklSdelqtalseakgatddleaaiekadqaksaadaatkkv 83 
                 L  Len +  ++       +  sk+ + +++  se k ++ d++++ +++ +  s++ ++ + +
  EPX70609.1  47 LLSLENSISLFERGNSTLTDLRSKFKERIKKHDSESKHIQHDYQKKSNHLRDKFSQVLDLSRNL 110
                 6678888888888888888888888888888888888888888888888766655555554444 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00057
                 HHHHHHHHHHHHHHHHHHHHHHTT---------CHHH CS
     T3SSipB  69 adqaksaadaatkkvdeaqkrlkeLaPdePekaklea 105
                  +q +s  + ++  +d+ + +++eL+P++P   +l++
  EPX70609.1 660 PKQRQSMTKMVQTYLDQLLSSIQELDPNDPSLFALKK 696
                 58999*************************9887776 PP

>> Fibin  Fin bud initiation factor homologue
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.8   2.3e-05     0.058     110     168 ..      57     115 ..      37     128 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.3e-05
       Fibin 110 fsnsdksllelevkfkqsqeqekreekrlnddflkkvaevrellketldisaglrdkhe 168
                 f   + +l++l +kfk   +++  e k++++d+ kk ++ r+ + + ld+s  l+d+ +
  EPX70609.1  57 FERGNSTLTDLRSKFKERIKKHDSESKHIQHDYQKKSNHLRDKFSQVLDLSRNLNDNVD 115
                 6677889************************************************9865 PP

>> IMPa_helical  Immunomodulating metalloprotease helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1       1.6   4.2e+03      29      48 ..      82     101 ..      57     123 .. 0.60
   2 ?   -2.9   0.0       3.5   8.9e+03      33      49 ..     234     250 ..     230     252 .. 0.84
   3 ?    0.2   0.0      0.37   9.5e+02      38      87 ..     606     654 ..     599     660 .. 0.79
   4 ?   10.2   0.1    0.0003      0.78      24      81 ..     658     716 ..     639     747 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.6
                   STTH.HHHHHHHHHHHHHHH CS
  IMPa_helical  29 eaklkeefkkaaesirsale 48 
                   +++++++++k+ +++r++++
    EPX70609.1  82 SKHIQHDYQKKSNHLRDKFS 101
                   34444555555555554443 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 3.5
                   .HHHHHHHHHHHHHHHH CS
  IMPa_helical  33 keefkkaaesirsalea 49 
                    +ef+ +a+ ir+ +++
    EPX70609.1 234 LQEFNGGASVIREFVNQ 250
                   589*********98876 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.37
                   HHHHHHHHHHHHHHHTT--GGGSSS-HHHHHHHHHHHHHHHH--S-B-T. CS
  IMPa_helical  38 kaaesirsalealdsskidlfaeegyrlekllvLlaDkyRqeiryPmdka 87 
                   ++++++  a+++l+++  +lf ++ + l   l Ll   yR +i+y m+++
    EPX70609.1 606 ETINTLSLAITNLEHRVNSLFYTSVKALCSRLDLLLSPYR-NISYAMSEE 654
                   5677788899999999999**9997777666666667898.699999875 PP

  == domain 4  score: 10.2 bits;  conditional E-value: 0.0003
                   EE-TTSTTH.HHHHHHHHHHHHHHHHHHHTT--GGGSS.S-HHHHHHHHHHHHHHHH-- CS
  IMPa_helical  24 ksCdeeaklkeefkkaaesirsalealdsskidlfaee.gyrlekllvLlaDkyRqeir 81 
                   +s ++++++++  ++  +++ s++++ld ++ +lfa++ ++ l  ++vL+  ++R++++
    EPX70609.1 658 VSPKQRQSMTKMVQTYLDQLLSSIQELDPNDPSLFALKkKTALNLAAVLIEFAFRSKVT 716
                   5667888999999999*********************9455555567888889999997 PP

>> HEPN_Toprim_N  HEPN/Toprim N-terminal domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.3     6e-05      0.15      74     159 ..      63     151 ..      62     175 .. 0.75
   2 ?   -2.7   0.0       1.7   4.5e+03      55      71 ..     624     640 ..     615     640 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 6e-05
  HEPN_Toprim_N  74 tleaaeaeyeeyvkeaieeresfqeaede.areellsfeeflkafvlndwlsalkkaiddgiieledeereeeepegrlakialdr.....d 159
                    tl+++++ ++e +k+++ e + +q++ ++  ++ + +f ++l   +l++ l++  ++++ g ++   e +  e +++r+++ a+ +     +
     EPX70609.1  63 TLTDLRSKFKERIKKHDSESKHIQHDYQKkSNHLRDKFSQVL---DLSRNLNDNVDDMKGGLVDVGKELELAENHRKRILASADLIqyymeF 151
                    99**********************999887788888888887...66777777777778888888888888888888888776665665552 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1.7
  HEPN_Toprim_N  55 ygyrrtlktvkpRLell 71 
                     ++ +++k + +RL+ll
     EPX70609.1 624 SLFYTSVKALCSRLDLL 640
                    6799***********97 PP

>> Nuc_recep-AF1  Nuclear/hormone receptor activator site AF-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.61   1.6e+03      31      61 ..     274     304 ..     265     311 .. 0.76
   2 ?    9.2   0.1   0.00047       1.2      30      66 ..     624     660 ..     596     687 .. 0.70

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.61
  Nuc_recep-AF1  31 sLpspistlsspinglgspysVIssslgsps 61 
                    +L+ p + + ++i +l s ++ I s +   +
     EPX70609.1 274 ALQDPFQPVPASIKSLSSLFNEICSVVDRDC 304
                    5777888888888888888888888776655 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00047
  Nuc_recep-AF1  30 rsLpspistlsspinglgspysVIssslgspslslps 66 
                      + + +++l+s ++ l spy+ Is ++++ ++ ++ 
     EPX70609.1 624 SLFYTSVKALCSRLDLLLSPYRNISYAMSEEQIDVSP 660
                    34567799*********************99986644 PP

>> FliD_C  Flagellar hook-associated protein 2 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   2.6   0.00039         1     177     239 ..      50     111 ..       5     112 .. 0.70
   2 ?    1.8   0.1     0.052   1.3e+02     141     217 ..     610     677 ..     605     686 .. 0.79

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00039
                 HHHHHHHHHSTT.SHHHHHHHHXXXXHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH CS
      FliD_C 177 lenllksyvkssngtlqtasknltkqikdldkkiedldkrletleerlkkqfaalekavskln 239
                 len+++ + + +n+tl+ + ++ +++ik+ d++ ++++  ++++ + l+ +f++  ++ ++ln
  EPX70609.1  50 LENSISLF-ERGNSTLTDLRSKFKERIKKHDSESKHIQHDYQKKSNHLRDKFSQVLDLSRNLN 111
                 34444433.45558999************************************9888877776 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.052
                 HHHHHHHHHHHHHHHHHTTTSS.......SXSHHHHHHHHHHHHHSTT.SHHHHHHHHXXXXHHHHHHHHHHHHHCH CS
      FliD_C 141 kLkkalkenpssveelFsgstsqektvtsdsglatrlenllksyvkssngtlqtasknltkqikdldkkiedldkrl 217
                 +L+ a+++    v++lF           s + l +rl+ ll++y + s    +++++  +kq ++++k ++++ ++l
  EPX70609.1 610 TLSLAITNLEHRVNSLFYT---------SVKALCSRLDLLLSPYRNISYAMSEEQIDVSPKQRQSMTKMVQTYLDQL 677
                 6777888888889999987.........5899*************99988888888888888888888887765544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (810 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1224  (0.0682693); expected 358.6 (0.02)
Passed bias filter:                      691  (0.0385409); expected 358.6 (0.02)
Passed Vit filter:                        70  (0.00390429); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.95u 0.37s 00:00:01.31 Elapsed: 00:00:00.59
# Mc/sec: 4162.90
//
Query:       EPX70610.1  [L=171]
Description: hypothetical protein SOCG_04346 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-18   67.5   0.0    2.5e-18   66.7   0.0    1.4  1  zf-PARP   Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finge


Domain annotation for each model (and alignments):
>> zf-PARP  Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.7   0.0   1.4e-22   2.5e-18       1      82 []      11      96 ..      11      96 .. 0.95

  Alignments for each domain:
  == domain 1  score: 66.7 bits;  conditional E-value: 1.4e-22
                EE-S-S--B-SS..S-.-B--SSSEEEEE-...------EEEEHHHHHTSSS--S-GGG........EETTTTS-HHHHHHHHHHH CS
     zf-PARP  1 EyAksgrakCkk..Ck.kkIakgelRlgkkveieeseskrWyHvgCftekqiknkketkeieee.eeiegfeeLekedqekvrdal 82
                E+A+++r+kCk+  C   kI+ g +R+g+ v+  +++s++W+H+gC+t++++kn k++   ++  + ++g+  L +e  +k+++a+
  EPX70610.1 11 EIASNSRSKCKGslCGrAKIPAGVIRFGTFVDSGRFQSWAWKHWGCVTPRMLKNIKNRLGEDDLkNTMDGITALPDEWIDKIIRAV 96
                89************999*****************************************97666599****************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       553  (0.0308439); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.35s 00:00:00.92 Elapsed: 00:00:00.57
# Mc/sec: 907.17
//
Query:       EPX70611.1  [L=587]
Description: FAD binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-38  133.0   0.0    1.8e-38  132.3   0.0    1.3  1  FAD_binding_1  FAD binding domain
    7.8e-15   55.5   0.0    1.8e-14   54.3   0.0    1.6  2  NAD_binding_1  Oxidoreductase NAD-binding domain


Domain annotation for each model (and alignments):
>> FAD_binding_1  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.3   0.0     2e-42   1.8e-38       6     222 .]     172     391 ..     167     391 .. 0.94

  Alignments for each domain:
  == domain 1  score: 132.3 bits;  conditional E-value: 2e-42
                    TB-EEEEEEEEEE---.-SS--EEEEEEE-TTB....T----TT-EEEE-----HHHHHHHHHHHT--T..T-EEEEEESSTT.........S--S CS
  FAD_binding_1   6 kkvflakvlknreLtkpesernvihveldisds....glkYetGdhlgvypsNneelVeellellgldpkadevvelkaldee.......saekep 90 
                     +vf+a++l++r Lt+p++ +++  v ldis +    g  +++G+++gv+p+N+++++  l +ll+     +e+ + k+l ++       + e++p
     EPX70611.1 172 FHVFAAPILNVRTLTNPGAIKRTYNVTLDISKYplkeGSDWKIGGSFGVMPPNPDNEIFRLAHLLNVPL--NELYDPKTLHTSggrwptiWGEEKP 265
                    47*******************************999999****************************99..888887777766777***999**** PP

                    SSSSEEHHHHHHHTB--SS.---HHHHHHHGGG-SSHHHHHHHHHHHH-HHHHHTTTTT--HHHHHHHHHTT---TTS-HHHHHHHS-B---EEEE CS
  FAD_binding_1  91 rleptTlrqalkyylditg.ppskqlleaLaefaseeeekqkLekLssdegakeykelklneartllevleefpsvklplefLlevlpqLkpRyYS 185
                    r   +++  +lk+  d+++ ppsk +++ La++ +++ e + L  Ls+    +++++    e+ ++ +vle+fp ++++++++++ lpqL+pR+YS
     EPX70611.1 266 RSLEISIYHVLKWCSDFLSrPPSKDFYRLLAKHSKNPIEHHILLGLSNC--SQNICS----ENVSISDVLEAFPNSRPSIDEVISLLPQLMPRWYS 355
                    *******************9***************************96..677765....5699******************************* PP

                    B-S-TTTTTTEEEEEEE--EE---SSS--EE-HHHHH CS
  FAD_binding_1 186 iSssskvhpdevhltvvVveyetdgegrirkGvcsny 222
                    iS++++  +  ++++ +V+e+   ++g++r+Gvcs +
     EPX70611.1 356 ISNDPDLGKGVLEMAFTVQEFAG-PDGQMRTGVCSGF 391
                    **********************7.***********86 PP

>> NAD_binding_1  Oxidoreductase NAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       1.9   1.7e+04      11      42 ..     288     319 ..     287     323 .. 0.72
   2 !   54.3   0.0     2e-18   1.8e-14       1     101 [.     438     542 ..     438     550 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 1.9
                    HHHHHHHHHHHCTTCSEEEEEEEESSGCGSTT CS
  NAD_binding_1  11 vrsvlraileeakdktkvvlvyGnrteedlly 42 
                     + + r +++ +k++ +++++ G  +  + ++
     EPX70611.1 288 SKDFYRLLAKHSKNPIEHHILLGLSNCSQNIC 319
                    56677778888888899999999887665555 PP

  == domain 2  score: 54.3 bits;  conditional E-value: 2e-18
                    EEEEGGGGHHHHHHHHHHHHHCTTCSEEEEEEEESSGC.GSTTHHHHHHHHHHCTT.EEEEEEEESSCTTTSSSEESSHHHHHHHHHHH.....HS CS
  NAD_binding_1   1 miagGtGiaPvrsvlraileeakdktkvvlvyGnrtee.dllyreeleelakklpg.rlkvvavvsreeagweggkgrvqdalleells.....lk 89 
                    +i++G+GiaP+r++++++l++a  ++kv+++ G+r +  d ly  e++++   + + +++  + v +  +   g++ +vqda+++ + +     ++
     EPX70611.1 438 LIGAGVGIAPFRGFVQRRLANAACTGKVWIIQGCRDQTlDELYHGEWNTIPGHHTNpKCRAKKLVVESRN---GRREYVQDAVRR-HGKviwdvIN 529
                    79******************************************************99999999555444...56********55.555599999* PP

                    STTEEEEEEC.SH CS
  NAD_binding_1  90 keethvyvCG.pp 101
                     ++  +y+CG  +
     EPX70611.1 530 HKNGRIYLCGsGK 542
                    **********444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (587 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       445  (0.0248201); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 4237.86
//
Query:       EPX70612.1  [L=304]
Description: acyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0031   17.1   0.0     0.0064   16.1   0.0    1.5  1  Acyltransferase  Acyltransferase
  ------ inclusion threshold ------
      0.044   13.9   0.4       0.13   12.5   0.4    1.9  1  NiFe_hyd_3_EhaA  NiFe-hydrogenase-type-3 Eha complex subunit 


Domain annotation for each model (and alignments):
>> Acyltransferase  Acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   7.2e-07    0.0064      19     111 ..     113     203 ..      99     213 .. 0.54

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 7.2e-07
  Acyltransferase  19 vaNHqsylDvlllwlllyksngprnvviiakkellsi.pllgflmrllgfifidR..ksnaraagslenise.lleegklvviFPEGtrsrege 108
                      + N +s +Dvl+ + l+ +  +++n +      + si  ++++++r    +         ar+   l++i + ++++gk+v++FPEG +++ ++
       EPX70612.1 113 AVNSTSPVDVLTVSSLFDCIFVQANSKSSNVLPVSSItAFFSHFSR----VN--LmlPPPARDLRPLSEICKdATKNGKVVIVFPEGSTTNGRG 200
                      5555666666666666622222222222222222222222222222....22..1222334444445544444**************9998877 PP

  Acyltransferase 109 llp 111
                      l +
       EPX70612.1 201 LCQ 203
                      644 PP

>> NiFe_hyd_3_EhaA  NiFe-hydrogenase-type-3 Eha complex subunit A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.4   1.4e-05      0.13      31      73 ..      19      61 ..      14     100 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.4e-05
  NiFe_hyd_3_EhaA 31 PllpekParqsftisvifPtavlalGllalvfklgveiydGll 73
                     P+  ekP ++sf+  +i P a++ + l+ ++  + + i++G+l
       EPX70612.1 19 PIYAEKPSITSFKWLIILPVALVRIPLCVITSIFYFVIWSGIL 61
                     8999***********************9999988888887764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       479  (0.0267165); expected 358.6 (0.02)
Passed bias filter:                      326  (0.0181828); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 2100.93
//
Query:       EPX70613.1  [L=344]
Description: Sim4 and Mal2 associated protein 2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
     0.0063   15.2   0.0      0.009   14.7   0.0    1.2  1  Fibrillarin_2  Fibrillarin-like archaeal protein
  ------ inclusion threshold ------
        8.7    6.4   8.2        9.9    6.2   5.6    2.4  2  FlxA           FlxA-like protein


Domain annotation for each model (and alignments):
>> Fibrillarin_2  Fibrillarin-like archaeal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0     1e-06     0.009     414     490 ..      65     142 ..      33     148 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1e-06
  Fibrillarin_2 414 llGgrfvsWviakeldkkvdeilisdadpwvekvtvenlreeldaeiiagdgddkkaveeadksi.itstiPeiaeki 490
                    ll  r   +  ++ l++ v+++    ++p vek   e+l+e l       ++ddk++++e d+si i s +P+i++ +
     EPX70613.1  65 LLERRNQLYNQISLLEQDVERVHKHASNPNVEKQEHEMLKELLGLFFEVPQADDKQSSKENDNSIyIPSALPNINRPV 142
                    556666666677889999******************************************99996599******9865 PP

>> FlxA  FlxA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   5.6    0.0011       9.9      30      87 ..      45     105 ..      11     126 .. 0.78
   2 ?   -2.5   0.0      0.57   5.1e+03      13      27 ..     301     315 ..     298     323 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0011
        FlxA  30 qkqLkelsesdeltkeekk...kqqqliqaQIqqlqaQIaqlqqqqaekaqekqqsekeek 87 
                 ++  ++ ++s+e ++ ekk   ++++++ +QI+ l++ ++++ + +++ + ekq+ e+ ++
  EPX70613.1  45 EDTPNDEKNSSEPPAWEKKellERRNQLYNQISLLEQDVERVHKHASNPNVEKQEHEMLKE 105
                 55556666776666666666679*******************************9999776 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.57
        FlxA  13 sgsasqiasLqkQik 27 
                 ++sa+ i+ L+k ik
  EPX70613.1 301 QKSAESISLLTKNIK 315
                 688999999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (344 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1073  (0.0598472); expected 358.6 (0.02)
Passed bias filter:                      463  (0.0258241); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.29s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 2258.79
//
Query:       EPX70614.1  [L=417]
Description: Sir2 family histone deacetylase Hst4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.9e-26   91.7   0.0    2.1e-25   89.7   0.0    2.0  1  SIR2          Sir2 family
  ------ inclusion threshold ------
       0.18   11.6   0.1        2.5    7.8   0.1    2.2  2  TPP_enzyme_M  Thiamine pyrophosphate enzyme, central domain


Domain annotation for each model (and alignments):
>> SIR2  Sir2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.7   0.0   2.4e-29   2.1e-25       1     175 [.      68     281 ..      68     283 .. 0.81

  Alignments for each domain:
  == domain 1  score: 89.7 bits;  conditional E-value: 2.4e-29
                 -GGGGGGGT---SSSTTSHHHHSCHHH.HS.SHHHHHHHHHHHHH....HHHHHHHHHHCC..TSS--HHHHHHHHHHHTTCEEEEEES-SSSHHHH.T CS
        SIR2   1 GAGiStesGipdfRskeGlyaklakee.la.spealfskkllvee....vfyniarellae..eaepnaaHkalkklekkgkllrliTQNiDgLekk.a 90 
                 GAGiS  +GipdfRs++Gl++ l++e  l+ s ++lf+  + ++     +f +++++l +   +a p+  H++l+kl k +kllrl+TQNiD Le +  
  EPX70614.1  68 GAGISCGAGIPDFRSSDGLFSSLRSEYkLNcSGKELFDGAVYRDLksvnIFHEMIKKLHELsdNAVPTDFHYFLSKLAKDSKLLRLYTQNIDFLETRlE 166
                 9*********************9987655414556666555444335668999998887666699******************************8735 PP

                 T-S............SEEETTEEEEEEEETTTSBEEECCGGHCHHHCCTT.B-TTTCC................BEEEEE--CTSB-S..HHHHHHHH. CS
        SIR2  91 Gsk............kvvelHGslakakcvkcekkldkeelqeeieaekvpecekcgk................llkpdvvfFGealp..dklkklie. 158
                 G++            + + lHG+l+ a+c++c          +  e+  ++ c++c +                +l+p++v++ e  p  +++  +++ 
  EPX70614.1 167 GLQtctplpqsapwpTSIPLHGTLEVARCTRCPFVRP--FHPDLFEKDGLTACPECRTqnevrriagkrlimegCLRPRIVLYNEGHPdsEAIGAVCSq 263
                 8876666666666666789*************98544..4667777777888999988889************************99975566666665 PP

                 .HHHH-SEEEEES--STS CS
        SIR2 159 .kveeadlllviGtSlkV 175
                    ++ d l+v GtS k+
  EPX70614.1 264 dLKSRPDCLIVAGTSCKI 281
                 345678*********986 PP

>> TPP_enzyme_M  Thiamine pyrophosphate enzyme, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.1   0.00028       2.5       4      23 ..      53      72 ..      50      80 .. 0.89
   2 ?    1.2   0.0     0.032   2.9e+02      75     113 ..     266     309 ..     246     332 .. 0.54

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.00028
                  HHHHHHH-SSEEEEE-CHHC CS
  TPP_enzyme_M  4 aaellkaakrpvilvGggva 23
                  a+++l++akr+vi+ G g++
    EPX70614.1 53 AIAALRKAKRIVIVTGAGIS 72
                  8899*************987 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.032
                   HHH-SEEEEES-SSSTCCCTT...TTT.TTTTT-.EEEEEESSC CS
  TPP_enzyme_M  75 leeaDlvlalGarfddirttg...sep.efapea.kiihididp 113
                     + D++++ G+ ++   +     + +  +++++  +i ++ d+
    EPX70614.1 266 KSRPDCLIVAGTSCKIPGVKRiikEMSnSVHRQKgSVIWLNHDA 309
                   45577777777775443332233222223444444566665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (417 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       944  (0.0526521); expected 358.6 (0.02)
Passed bias filter:                      634  (0.0353617); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.30s 00:00:00.84 Elapsed: 00:00:00.46
# Mc/sec: 2742.90
//
Query:       EPX70615.1  [L=1356]
Description: ATP-dependent DNA helicase Hrp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.8e-65  221.0   0.0    2.8e-65  220.3   0.0    1.3  1  SNF2_N           SNF2 family N-terminal domain
    3.3e-26   91.0   4.2    2.7e-14   52.8   0.1    3.2  2  Chromo           Chromo (CHRromatin Organisation MOdifier) do
      1e-19   70.9   0.0    5.5e-19   68.6   0.0    2.4  1  Helicase_C       Helicase conserved C-terminal domain
      2e-10   41.0   0.0    1.1e-09   38.5   0.0    2.3  1  ResIII           Type III restriction enzyme, res subunit
    1.1e-06   29.0   0.3    1.1e-06   29.0   0.3    5.3  4  Cdh1_DBD_1       Chromodomain helicase DNA-binding domain 1
    1.6e-05   24.2   0.0    0.00022   20.5   0.0    2.6  1  HDA2-3           Class II histone deacetylase complex subunit
    3.3e-05   23.7   0.0    6.1e-05   22.9   0.0    1.5  1  DEAD             DEAD/DEAH box helicase
     0.0011   19.2   1.7      0.003   17.8   0.0    2.6  2  CHDCT2           CHDCT2 (NUC038) domain
     0.0035   18.0   0.5     0.0035   18.0   0.5    4.8  5  CDH1_2_SANT_HL1  CDH1/2 SANT-Helical linker 1


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  220.3   0.0   1.4e-68   2.8e-65      39     349 ..     388     672 ..     344     673 .. 0.83

  Alignments for each domain:
  == domain 1  score: 220.3 bits;  conditional E-value: 1.4e-68
                 ..........HHHHHTT--EEE---TTS--HHHHHHHHH...HHTTTS---.......S-EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx... RF
      SNF2_N  39 patgevveesaeakqsvrGGiLaDemGLGKTvqvlalilaqrakeekdkekkrkdtlagptLivvPaslldqWeneierhvsssalrvlvyggqkk... 134
                 +++ + ++  a + + + +GiLaDemGLGKTvq++++i    +  ++ +++       gp+LivvP s++  W++++ +++++ +  +++++ +++   
  EPX70615.1 388 DFQLTGINWMAYLWHRNENGILADEMGLGKTVQAVCFIS---YLVHSLRQH-------GPFLIVVPLSTIPAWQETLTNWAPDLNCICYTGNTESRsni 476
                 55555556667789999**********************...999999977.......**************************987777777766666 PP

                 -----------------EEEE-HHHHHHHT......TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHHHHHHH-TT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 135 mkkkntkvapklladydvvittYdvlsreaelqkkrsvlkqvewkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledlygLlkfLree 233
                 ++ +    +++   +++v++ttY+++ +++      ++l++ +w+++ +DE+h+lkns s+++e++s+++tsnr+++tGTP+qn+l++l +L++fL+++
  EPX70615.1 477 REYEFFMSSNNRKLKFNVLLTTYEYILKDK------NELNNFRWQYLAIDEAHRLKNSGSSLYETLSQFKTSNRLLITGTPLQNNLKELASLVNFLMPG 569
                 44444455678899*************999......8************************************************************** PP

                 TT--HHHHHHHTHHHHHHHHHHHHHHHHTT-STTEE---GGGT--S---EEEEEEEEE--HHHHHHHH....................HHHHHH-HHH- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 234 pfgekqtfdkllqrpieaqaekgrsrLlqllqrlmlrrakkdveknlPpkteeiiflklskverksYnrllevlrkkalakllkrseaalkssskskek 332
                 +f      +  +++p e ++e  ++ L q lq+++lrr kkdvek+lP k+e+i++++ls+++ ++Y              +l+++  al  s++ k++
  EPX70615.1 570 KFYI--KEELNFDQPNE-EQERDIRDLQQRLQPFILRRLKKDVEKSLPSKSERILRVELSDMQTQWYR------------NILTKNYRALVGSTDGKNQ 653
                 **94..45667999999.67777899******************************************............4444555555555544433 PP

                 ..HHHHHHHHHHHHH---X CS
                 ..xxxxxxxxxxxxxxxxx RF
      SNF2_N 333 ..ilelllelrqacnhpql 349
                   +l+++ el+++ nhp+l
  EPX70615.1 654 lsLLNIVVELKKTSNHPYL 672
                 459**************98 PP

>> Chromo  Chromo (CHRromatin Organisation MOdifier) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.8   1.0   6.5e-13   1.3e-09       3      39 ..     205     247 ..     203     263 .. 0.83
   2 !   52.8   0.1   1.4e-17   2.7e-14       2      54 .]     301     352 ..     300     352 .. 0.96

  Alignments for each domain:
  == domain 1  score: 37.8 bits;  conditional E-value: 6.5e-13
                 EEEEEEEEEETTEEC......EEEEEEETTSTGGGTEEEEGGG CS
      Chromo   3 VerIidhrtdkdgle......leYlVKWkglpysentWEpeen 39 
                 ++ +++hr+++d ++      ++Yl+KW++l++ +ntWE+ e 
  EPX70615.1 205 IDFVLNHRKREDAEDddpkksYQYLIKWQELSHLHNTWEDYES 247
                 799*************************************774 PP

  == domain 2  score: 52.8 bits;  conditional E-value: 1.4e-17
                 EEEEEEEEEEETTEECEEEEEEETTSTGGGTEEEEGGGCSSHSHHHHHHHHHH CS
      Chromo   2 eVerIidhrtdkdgleleYlVKWkglpysentWEpeenlekcfqelideFkkr 54 
                 +VerI++++ +++g+ +eY+VKW++lpy+ +tWE+  ++ +++++ + +F +r
  EPX70615.1 301 IVERIVASEPNEEGK-TEYFVKWRQLPYDNCTWEDGNLIYSMAPNEVFQFLQR 352
                 8**************.*****************************99999876 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.6   0.0   2.8e-22   5.5e-19       5     111 .]     704     814 ..     700     814 .. 0.88

  Alignments for each domain:
  == domain 1  score: 68.6 bits;  conditional E-value: 2.8e-22
                 HHHHHH.HHTTTTSEEEEEESSHHHHHH.HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH...TTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHH CS
  Helicase_C   5 allell.kleeeggkilifvntidrlek.vklllekkgikvavlhgelpqnereeileqfn...kgesdvLiatdvaerGidipkvnlVinfdlprnvt 98 
                  l +ll  l+++g+++lif++ +++l+   +++ + +g+++ +l+g++p++ r+ +++ fn   + ++ +L++t++++ Gi+++ +++Vi+fd ++n++
  EPX70615.1 704 LLDKLLqRLKRDGHRVLIFSQMVKMLNIlGEYM-SLRGYNYQRLDGTIPASVRRVSIDHFNapdSPDFVFLLSTRAGGLGINLNTADTVIIFDSDWNPQ 801
                 5666777789****************6544444.5559***********************766677889***************************** PP

                 HHHHHHTTSSSTT CS
  Helicase_C  99 syiqriGRtgRag 111
                    q++ R++R+g
  EPX70615.1 802 ADLQAMARAHRIG 814
                 ***********97 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.5   0.0   5.5e-13   1.1e-09      12     169 ..     394     551 ..     377     553 .. 0.81

  Alignments for each domain:
  == domain 1  score: 38.5 bits;  conditional E-value: 5.5e-13
                 HHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S......-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--............. CS
      ResIII  12 ienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkee.kflflvprkslleqtleefkkflseaykeigkkvsgdkkka...........ke 98 
                 i+ +++ l  +r+++g+++ + G GKT+ a+ +i +l ++ ++   fl++vp  ++   ++e++++++++    ++  ++g+++++           ++
  EPX70615.1 394 IN-WMAYLW-HRNENGILADEMGLGKTVQAVCFISYLVHSLRQHgPFLIVVPLSTIP-AWQETLTNWAPDL---NCICYTGNTESRsnireyeffmsSN 486
                 44.334444.899*****************888888888877776999999988775.6999999999998...4555555555555566888898888 PP

                 .....-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS..TTTHHHHHT---SEEEEEESS- CS
      ResIII  99 kdstnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgak.kswreilekfkeavllglTATp 169
                 +++ + ++l+tt++ + +d+       +el + r +++ iDEaHrl+ + +s  e l +fk + +l +T+Tp
  EPX70615.1 487 NRKLKFNVLLTTYEYILKDK-------NELNNFRWQYLAIDEAHRLKNSgSSLYETLSQFKTSNRLLITGTP 551
                 9999999***********99.......999999999***********9764666669999***********9 PP

>> Cdh1_DBD_1  Chromodomain helicase DNA-binding domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   8.6         2     4e+03      25      93 ..     935    1001 ..     923    1005 .. 0.61
   2 !   29.0   0.3   5.5e-10   1.1e-06       1      61 [.    1004    1064 ..    1004    1069 .. 0.94
   3 !    7.8   0.0     0.002         4     103     120 .]    1069    1086 ..    1064    1086 .. 0.87
   4 ?   -5.9   4.5         9   1.8e+04      73      86 ..    1263    1276 ..    1229    1305 .. 0.50

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 2
  Cdh1_DBD_1   25 eliadGtLPeknielleelyeelleeakklvkeeeekrakeleeleadaeeykeklkkgevkadeekkd 93  
                  ++  d  +Pe + e++ee  +  +  a++  +ee e++++e++e+e++ ++++ k  +++ +  +++++
  EPX70615.1  935 DFKWDDIIPEEDLERIEEEER--VLAARRAEEEERERKEEEMREAEEEQTSRASKRTTKSITKRQQRRE 1001
                  555566677777777777544..3456666677777778888888777655555544444444444444 PP

  == domain 2  score: 29.0 bits;  conditional E-value: 5.5e-10
  Cdh1_DBD_1    1 ltEreiRalYkaiLkyGdlsnkleeliadGtLPeknielleelyeelleeakklvkeeeek 61  
                  + E+e+R lY+a++k+G +++++ +++ +  L + +++++ ++ ++++++ +k v++ e++
  EPX70615.1 1004 IREKEVRQLYRAMIKFGLVEERFTDIVREAELEATDPKRILQVSSDIVKSCEKAVEQVEAE 1064
                  68*****************************************************998765 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.002
  Cdh1_DBD_1  103 rrekkAiLFeykgvknlN 120 
                  ++ +kAiL ey+gvk +N
  EPX70615.1 1069 KQPRKAILIEYRGVKHIN 1086
                  5679************99 PP

  == domain 4  score: -5.9 bits;  conditional E-value: 9
  Cdh1_DBD_1   73 aeeykeklkkgevk 86  
                  + e++e++++ e+k
  EPX70615.1 1263 VGEEEEEEEEEEKK 1276
                  22222222222222 PP

>> HDA2-3  Class II histone deacetylase complex subunits 2 and 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   1.1e-07   0.00022       8     247 ..     621     838 ..     606     856 .. 0.77

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 1.1e-07
                 EEE---HHHHHHHHHHHHHTHHHHHHHHHSTTT--HHHH.HHHHHHHH.HHHHHHH-GGGT-....-TT--S-S-STTHHHHHHHT-HHHHHHHHHHHH CS
      HDA2-3   8 lPtpltelqkelteqivslhyedllkyvetsdsqeklslsikslticlenlslvanHPsLLv....dHympkklllkelpeklaetSgKFkvlndlvnl 102
                 l + l+++q   +  i++  y  l+      d +++l    ++l+i++ +l+  +nHP+L        +  +k++++++    + +SgK+ +l +l++ 
  EPX70615.1 621 LRVELSDMQTQWYRNILTKNYRALVGST---DGKNQL----SLLNIVV-ELKKTSNHPYLFPgteeKWLSGRKMTREDTLRGVIMNSGKMVLLDKLLQR 711
                 5567777788888888888887777655...555555....5688888.899********842222367889*************************** PP

                 HTTSS....EEEEEEE-STHHHHHHHHHHTTSSSEEEESSS--S--S---S-..................-SEEEEEEESS---TTTS--TT-S-E.EE CS
      HDA2-3 103 iierkrksslnvlvvakskkeldLiEalllGkklkikrysgeklydekkkkskdtkknsrktkeklkkkihsltihllsttrqltkdksllenikf.dl 200
                 +  +       vl+ ++ +k l+++  ++  ++ +++r++g+   +  +               +  +   s ++ +l +tr       l  n +  d 
  EPX70615.1 712 LKRDG----HRVLIFSQMVKMLNILGEYMSLRGYNYQRLDGTIPASVRRVSI------------DHFNAPDSPDFVFLLSTRAGG----LGINLNTaDT 790
                 *9999....99******************************86555544444............222334567788888877763....3333333399 PP

                 EEE-SST--TTSHHHHHHH---.-------EEEEEETTSHHHHHHHHT CS
      HDA2-3 201 iiafDssvdtsspsveslrtqn.rkknklpiirlvpinSieHvkLcfk 247
                 +i fDs+ +++ +   + r ++  +kn++ ++r ++ +++e   L++ 
  EPX70615.1 791 VIIFDSDWNPQADLQAMARAHRiGQKNHVNVYRFLSRDTVEEDILERA 838
                 9999*9999999999999988635667799999999999998777766 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.0     3e-08   6.1e-05      13     170 ..     403     552 ..     387     559 .. 0.76

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 3e-08
                 TTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHH.......HTT...CSEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......xxx...xxxx RF
        DEAD  13 gggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskl.......dng...vdiv 101
                 ++++ ++a e G GKT  ++  +   v +   +++   liv+P+  +     ++l+++    dl++ + +g+++ r+++++        + +    +++
  EPX70615.1 403 RNENGILADEMGLGKTVQAVCFISYLVHS--LRQHGPFLIVVPLSTI-PAWQETLTNWAP--DLNCICYTGNTESRSNIREYeffmssnN-RklkFNVL 495
                 678889999********999999988865..7777799*****9886.445566666666..5778888999999999999977777641.25669*** PP

                 EEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 102 vgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlp 170
                 ++t + +++  ++++ln  + ++l +DEa+rl ++  +  + + l+q++        +++ ++++ T+ 
  EPX70615.1 496 LTTYEYILK--DKNELNNFRWQYLAIDEAHRLKNS--GSSLYETLSQFK--------TSNRLLITGTPL 552
                 ****99999..77898999999***********98..666777788882........223666666665 PP

>> CHDCT2  CHDCT2 (NUC038) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   1.0       2.1   4.2e+03      88     120 ..     967    1000 ..     942    1036 .. 0.51
   2 !   17.8   0.0   1.5e-06     0.003       5      49 ..    1128    1172 ..    1125    1252 .. 0.77

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 2.1
      CHDCT2   88 ekvgslaqrfaelellaeshqkllkesaa.gnkn 120 
                  ++ ++ + r ae e+++ + ++++k+ ++ +++ 
  EPX70615.1  967 RERKEEEMREAEEEQTSRASKRTTKSITKrQQRR 1000
                  3333333333333333333333333322212233 PP

  == domain 2  score: 17.8 bits;  conditional E-value: 1.5e-06
      CHDCT2    5 WhRrHDyWllagvvlhGyaRwqDiqndprfaiinepFkseaekgn 49  
                  W  + D  llag+  hG++ wq i+ dp + + n  F +ea++ +
  EPX70615.1 1128 WGIKEDSMLLAGIDRHGFGSWQAIKMDPDLGLQNKIFLEEAKNEK 1172
                  888999*******************************99998744 PP

>> CDH1_2_SANT_HL1  CDH1/2 SANT-Helical linker 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0      0.06   1.2e+02       4      48 ..     243     285 ..     240     318 .. 0.73
   2 ?   -1.8   2.3       2.6   5.3e+03      41      79 ..     946     984 ..     940     997 .. 0.46
   3 !   18.0   0.5   1.8e-06    0.0035       4      69 ..    1005    1070 ..    1002    1082 .. 0.87
   4 ?   -3.5   1.6       8.9   1.8e+04      59      70 ..    1267    1278 ..    1235    1290 .. 0.59
   5 ?   -2.5   0.1       4.4   8.8e+03      10      44 ..    1300    1336 ..    1298    1349 .. 0.67

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.06
  CDH1_2_SANT_HL1   4 tdaeiRrFvksykkfsaplkrldaiacdAeLqeKplsdLkklgel 48 
                       d e   Fv+ ykk+ + +k+  +i  d e++e p +    l  l
       EPX70615.1 243 EDYESATFVRGYKKVDNYIKQ--NIIYDREIREDPSTTYEDLEAL 285
                      6888899************95..999*******999877777554 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 2.6
  CDH1_2_SANT_HL1  41 dLkklgellkerCeealeeekeekeeeeeekeekkkrer 79 
                      dL ++ e  +   ++  eee++e++eee++++e+ +++r
       EPX70615.1 946 DLERIEEEERVLAARRAEEEERERKEEEMREAEEEQTSR 984
                      555555544444444444443344333333333333332 PP

  == domain 3  score: 18.0 bits;  conditional E-value: 1.8e-06
  CDH1_2_SANT_HL1    4 tdaeiRrFvksykkfsaplkrldaiacdAeLqeKplsdLkklgellkerCeealeeekeekeeeee 69  
                        ++e+R+  +++ kf+   +r+ +i ++AeL+    + + +++  + ++Ce+a+e+ ++e+ ++++
       EPX70615.1 1005 REKEVRQLYRAMIKFGLVEERFTDIVREAELEATDPKRILQVSSDIVKSCEKAVEQVEAEDIKSKQ 1070
                       579*****************************999999999999999********99666655544 PP

  == domain 4  score: -3.5 bits;  conditional E-value: 8.9
  CDH1_2_SANT_HL1   59 eekeekeeeeee 70  
                       ee+ee+ee++ +
       EPX70615.1 1267 EEEEEEEEKKPK 1278
                       111222222222 PP

  == domain 5  score: -2.5 bits;  conditional E-value: 4.4
  CDH1_2_SANT_HL1   10 rFvksykkfsaplkrldaiac.dAeLq.eKplsdLkk 44  
                       r  +   k +++++ l a a+ dA+L  e +++ +kk
       EPX70615.1 1300 RTTRNSSKAPSAMDTLTAAAGlDADLDiESSKKSVKK 1336
                       5566667778888888887755888853555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1356 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2299  (0.128228); expected 358.6 (0.02)
Passed bias filter:                      622  (0.0346924); expected 358.6 (0.02)
Passed Vit filter:                       113  (0.00630264); expected 17.9 (0.001)
Passed Fwd filter:                        34  (0.00189637); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 1.26u 0.32s 00:00:01.58 Elapsed: 00:00:00.52
# Mc/sec: 7915.11
//
Query:       EPX70616.1  [L=132]
Description: autophagy associated ubiquitin-like modifier Atg12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.2e-33  113.1   0.1    1.1e-32  112.2   0.0    1.4  2  APG12            Ubiquitin-like autophagy protein Apg12
    0.00044   20.4   0.0    0.00057   20.0   0.0    1.3  1  Atg8             Autophagy protein Atg8 ubiquitin like
      0.006   16.5   0.2     0.0073   16.2   0.2    1.1  1  Sec34            Sec34-like family
  ------ inclusion threshold ------
       0.14   11.9   0.1       0.26   11.1   0.0    1.5  1  Methyltransf_31  Methyltransferase domain
        1.4    8.9   4.5         14    5.7   0.3    2.7  3  DUF4083          Domain of unknown function (DUF4083)


Domain annotation for each model (and alignments):
>> APG12  Ubiquitin-like autophagy protein Apg12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       2.1   7.5e+03      30      40 ..       7      17 ..       2      37 .. 0.61
   2 !  112.2   0.0   3.1e-36   1.1e-32       1      87 []      46     132 .]      46     132 .] 0.99

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 2.1
                HHHHHHHHHCT CS
       APG12 30 kvilflkkeLk 40
                 v + l k+L+
  EPX70616.1  7 AVEDQLSKTLE 17
                55555555554 PP

  == domain 2  score: 112.2 bits;  conditional E-value: 3.1e-36
                 EEEEEEEEETTS---S--EEEEETTSBHHHHHHHHHHHCT-.SSSS-EEEETTTB---TTSBHHHHHHHH-BTTEEEEEEESSS--- CS
       APG12   1 kitirlkaigdvpilkkkklkvnasdtvakvilflkkeLklqaseslflYvnnsFaPsPdeeveeLyecfgtdkklvlnYcisvAfG 87 
                 k+++r+kaig++p+l+k+++++nas++++kvi+flkkeL ++ ++sl+lYvn  FaP+Pde++++Ly++f++d+ l+++Yc++vAfG
  EPX70616.1  46 KVNLRFKAIGRTPLLRKNVFAINASHRFDKVIRFLKKELGFKPDSSLLLYVNYCFAPAPDEIIGNLYDNFSVDGYLLIYYCVNVAFG 132
                 89************************************************************************************9 PP

>> Atg8  Autophagy protein Atg8 ubiquitin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   1.6e-07   0.00057      28     104 .]      56     132 .]      20     132 .] 0.81

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 1.6e-07
                 SS---S-SEEEEETTSBHHHHHHHHHHHTT--TTS-EEEEETTE-.SSTTSBHHHHHHHH--TTSSEEEEEESSSTB- CS
        Atg8  28 klpeldkkkylvPedltvgqlvliirkrlqlepekalfllvnetl.pstsatmsalyeeekdedgflyvvyssentfG 104
                 + p l k+ + + +     +++  ++k l ++p+ +l+l+vn  + p     +++ly++    dg+l + y+ + +fG
  EPX70616.1  56 RTPLLRKNVFAINASHRFDKVIRFLKKELGFKPDSSLLLYVNYCFaPAPDEIIGNLYDNF-SVDGYLLIYYCVNVAFG 132
                 4788899999999999999************************6615567789****875.68*********999998 PP

>> Sec34  Sec34-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.2     2e-06    0.0073      38     115 ..       7      87 ..       1     104 [. 0.80

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 2e-06
       Sec34  38 ektsslheaceqlleeqkrleelaeeieekLkyFeeldp..itrkLnspgss.lvksesFl.emLkklDeclefleehpefk 115
                 +   +l+++ e+l +e ++ ++l+e+i+e ++ ++e ++  ++ ++++ g + l +++ F+ +  ++ D+ ++fl++   fk
  EPX70616.1   7 AVEDQLSKTLESLQTE-EKSSSLQEKIDEIISSYNEKENrkVNLRFKAIGRTpLLRKNVFAiNASHRFDKVIRFLKKELGFK 87 
                 4456677777776555.66789*************998622666778999999*******989999**********999998 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   7.3e-05      0.26      61     113 ..      62     127 ..      33     130 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 7.3e-05
  Methyltransf_31  61 gdieeleklledekfDlilsn...........evl.....naladpdkileeiervlkpggilliedpr 113
                       ++++++ +    +fD ++ +           ++l     +  ++pd+i++++ ++++ +g+lli ++ 
       EPX70616.1  62 KNVFAINAS---HRFDKVIRFlkkelgfkpdsSLLlyvnyCFAPAPDEIIGNLYDNFSVDGYLLIYYCV 127
                      566666633...79*****9977777777776333789888899*********************9997 PP

>> DUF4083  Domain of unknown function (DUF4083)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.3    0.0039        14      36      52 ..      21      37 ..      12      42 .. 0.84
   2 ?    4.6   0.0    0.0087        31      44      57 .]      70      83 ..      56      83 .. 0.79
   3 ?   -2.6   0.2       1.5   5.5e+03       5      10 ..     122     127 ..     121     130 .. 0.82

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0039
     DUF4083 36 kkkkskeleqKLDkiIe 52
                 ++ks  l++K D+iI 
  EPX70616.1 21 TEEKSSSLQEKIDEIIS 37
                5679999*********5 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.0087
     DUF4083 44 eqKLDkiIeLLeKd 57
                    Dk+I+ L K+
  EPX70616.1 70 SHRFDKVIRFLKKE 83
                5678*******996 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 1.5
     DUF4083   5 liylii 10 
                 liy+++
  EPX70616.1 122 LIYYCV 127
                 799998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1852  (0.103296); expected 358.6 (0.02)
Passed bias filter:                     1268  (0.0707234); expected 358.6 (0.02)
Passed Vit filter:                       138  (0.00769703); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.49u 0.29s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 917.68
//
Query:       EPX70617.1  [L=574]
Description: transcription factor Pap1/Caf3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      5e-18   66.0   0.6      5e-18   66.0   0.6    3.6  3  PAP1             Transcription factor PAP1
    2.5e-09   37.1  10.3    2.5e-09   37.1  10.3    1.9  2  bZIP_1           bZIP transcription factor
  ------ inclusion threshold ------
      0.063   13.4  13.0       0.38   10.9   4.1    2.5  2  bZIP_2           Basic region leucine zipper
       0.22   10.8   5.5       0.36   10.0   5.5    1.2  1  Frigida          Frigida-like protein
       0.36   10.6   4.7       0.12   12.1   1.2    2.0  2  DivIC            Septum formation initiator
        1.8    8.8   6.4        6.3    7.0   4.7    2.3  2  cwf21            cwf21 domain
        5.3    7.6  13.7        1.7    9.2  10.0    2.1  2  bZIP_Maf         bZIP Maf transcription factor


Domain annotation for each model (and alignments):
>> PAP1  Transcription factor PAP1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9  14.0     0.058   1.5e+02     108     200 ..     193     287 ..      18     318 .. 0.57
   2 ?   -0.6   1.3      0.33   8.3e+02     241     261 ..     389     409 ..     379     429 .. 0.75
   3 !   66.0   0.6   1.9e-21     5e-18     299     371 .]     504     573 ..     472     573 .. 0.83

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.058
        PAP1 108 rgstassaesqsstysansgtstssdSPsssseshq......gqlSScgT.SPE.P.stqSPaakk.......sketsstieeeevah.ttidgeksfc 189
                 +++++ss++                dS s+ s++ +      +++S  gT SPE P s++SP+++           + s  +++   h +++   k+fc
  EPX70617.1 193 HNDSNSSSN---------------QDSTSANSNQYGvpglveSNSSMRGTlSPEtPiSVDSPQQQLqrpdhkrDSLSLSPYQDDFFVHrNASMDGKQFC 276
                 111111111...............2222222222212211112233345556663234566655544444322444555555555555145556799** PP

        PAP1 190 ekLglacgnik 200
                 +kL+ acg+i 
  EPX70617.1 277 QKLSSACGSIA 287
                 *********96 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.33
        PAP1 241 vLFGdyRepqdavlsqdfdgs 261
                  LF  +Rep++++ ++ f++ 
  EPX70617.1 389 DLFSTWREPTENLDKDYFNDD 409
                 69**********877777554 PP

  == domain 3  score: 66.0 bits;  conditional E-value: 1.9e-21
        PAP1 299 dekldeddevvpgedksqmltCtkiWdrlqsmekfrngeiDvDsLCseLrtKArCSegGvVvnqkdvedilkr 371
                 d + ++ddev+p + +++ ++C +iW ++ s ++f   +iD+D+LCs+L++KA+CS +GvV++q+++++ lk+
  EPX70617.1 504 DPQAKADDEVIPFK-EQKFIKCPEIWSKIMSHPNFS--QIDIDDLCSKLKQKAKCSASGVVLDQQELDQTLKK 573
                 556678******99.6889****************6..7*****************************99986 PP

>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.1  10.3   9.6e-13   2.5e-09       7      63 ..      89     145 ..      87     146 .. 0.96
   2 ?   -3.3   0.1         4     1e+04      54      63 ..     544     553 ..     542     554 .. 0.72

  Alignments for each domain:
  == domain 1  score: 37.1 bits;  conditional E-value: 9.6e-13
                 XXXX--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   7 ekrkqkNReaArrsRqRKqaeieeLerrvkaLekeNksLkseleelkkevekLkskv 63 
                  krk++NR a+r++R+RK+     Le++v +L++ N++   e+eelkk v+ L++++
  EPX70617.1  89 SKRKAQNRAAQRAFRKRKEDHLRTLESQVVTLQQLNSTTNIENEELKKRVQRLEEEL 145
                 69**************************************************99875 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 4
                 HHHHHHHHHH CS
      bZIP_1  54 kevekLkskv 63 
                 + ++kLk+k 
  EPX70617.1 544 DLCSKLKQKA 553
                 6788888875 PP

>> bZIP_2  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   4.1   0.00015      0.38       6      42 ..      88     125 ..      84     126 .. 0.90
   2 ?    7.2   1.6     0.002       5.2      26      45 ..     130     149 ..     127     151 .. 0.67

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00015
                 XXXXX.XXXXXXXX-HHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_2   6 rerRr.kNreAarrsRekkkakeeeleervkeLeeeNa 42 
                   +R+ +Nr+A r +R++k  + + le++v  L++ N+
  EPX70617.1  88 QSKRKaQNRAAQRAFRKRKEDHLRTLESQVVTLQQLNS 125
                 468888****************************9996 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.002
                 HHHHHHHHHHHHHHHHHHHH CS
      bZIP_2  26 keeeleervkeLeeeNaqLr 45 
                 ++eel++rv++Leee a+ r
  EPX70617.1 130 ENEELKKRVQRLEEELAAMR 149
                 56777777777777766654 PP

>> Frigida  Frigida-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   5.5   0.00014      0.36     216     285 ..      77     149 ..      76     151 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00014
     Frigida 216 sylkeskksakkilkegnns...aaqkeanekelaaLkavikcieehkleselplesLkkriaqLekakaekk 285
                 +y ++s ++  + +++++n+   +a  + +e +l++L + + ++++ +   +++ e+Lkkr+++Le++ a  +
  EPX70617.1  77 KYGRKSGENEPQSKRKAQNRaaqRAFRKRKEDHLRTLESQVVTLQQLNSTTNIENEELKKRVQRLEEELAAMR 149
                 6677888888888888777755566777888889999999999999999999***************988766 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1       1.6   4.1e+03      30      49 ..      50      69 ..      37      78 .. 0.57
   2 ?   12.1   1.2   4.8e-05      0.12      20      51 ..     111     142 ..     104     154 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 1.6
                HHHHHHHHHHHHHHHHHHCC CS
       DivIC 30 qaelaklkaeneeLeaevkd 49
                     + ++en++L++  +d
  EPX70617.1 50 ASLERSSSDENQSLQDLDDD 69
                44455555666666554333 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 4.8e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-X CS
       DivIC  20 kqlkqeiaalqaelaklkaeneeLeaevkdLk 51 
                 + l++++++lq+ + + + eneeL+++v++L+
  EPX70617.1 111 RTLESQVVTLQQLNSTTNIENEELKKRVQRLE 142
                 67899999999999999999999999999995 PP

>> cwf21  cwf21 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   4.7    0.0025       6.3       3      41 ..     107     145 ..     104     148 .. 0.90
   2 ?    0.6   0.0      0.25   6.3e+02      25      40 ..     537     552 ..     487     553 .. 0.87

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0025
       cwf21   3 HerrReIEvkvlelrdeLEeeglseeeIeervdelRekL 41 
                 ++  R  E++v+ l++     + + ee ++rv++l e+L
  EPX70617.1 107 EDHLRTLESQVVTLQQLNSTTNIENEELKKRVQRLEEEL 145
                 6777***********98888899*************999 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.25
       cwf21  25 lseeeIeervdelRek 40 
                  s+ +I+  +++l++k
  EPX70617.1 537 FSQIDIDDLCSKLKQK 552
                 57779********998 PP

>> bZIP_Maf  bZIP Maf transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1       2.8   7.2e+03      50      71 ..      46      67 ..      31      77 .. 0.66
   2 ?    9.2  10.0   0.00065       1.7      31      91 ..      88     148 ..      87     149 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 2.8
    bZIP_Maf 50 lqqkeelekekeeleeelerlq 71
                + +k +le++ +  +++l+ l 
  EPX70617.1 46 IADKASLERSSSDENQSLQDLD 67
                4566777777777777777665 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00065
    bZIP_Maf  31 qrRRrlKNrgyakscrkrrlqqkeelekekeeleeelerlqqelsrlrqekdalkrkneql 91 
                 q  R+ +Nr +++  rkr+ +  ++le++   l++ ++ ++ e+++l+++ ++l ++ +++
  EPX70617.1  88 QSKRKAQNRAAQRAFRKRKEDHLRTLESQVVTLQQLNSTTNIENEELKKRVQRLEEELAAM 148
                 67899*********************************************99999888766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (574 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1500  (0.0836633); expected 358.6 (0.02)
Passed bias filter:                      655  (0.036533); expected 358.6 (0.02)
Passed Vit filter:                        93  (0.00518713); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.70u 0.28s 00:00:00.98 Elapsed: 00:00:00.45
# Mc/sec: 3816.49
//
Query:       EPX70618.1  [L=201]
Description: 60S ribosomal protein L15 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      3e-88  294.5   8.6    3.7e-88  294.3   8.6    1.0  1  Ribosomal_L15e  Ribosomal L15


Domain annotation for each model (and alignments):
>> Ribosomal_L15e  Ribosomal L15
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  294.3   8.6   2.1e-92   3.7e-88       1     183 [.       2     183 ..       2     189 .. 0.98

  Alignments for each domain:
  == domain 1  score: 294.3 bits;  conditional E-value: 2.1e-92
                     -SHHHHHHHTTSTTSHHHHHHHHHHHHHHTTS-SEEEESS-SSHHHHHHHT--SSTTEEEEEEEEE-SS---..---SS---GGGG-SSS---SS CS
  Ribosomal_L15e   1 gaykylrelwkkkqsdvlrellrerlweyrqepavvrverptrldrArrLGYkakqGivvvrvrvrrGgrkkkvskgktgrkpkrqgvnklkpak 95 
                     gaykyl+el kkkqsdv  +l r+r+weyrq ++v+r++rp+r+d+ArrLGYkakqG+vv+r+rvrrGgrk++v+kg++++kp++qgvn+lk ++
      EPX70618.1   2 GAYKYLEELSKKKQSDVNLFLSRVRAWEYRQMNVVHRASRPSRPDKARRLGYKAKQGYVVYRIRVRRGGRKRPVPKGQVYGKPVHQGVNHLKYQR 96 
                     79********************************************************************************************* PP

                     -HHHHHHHHHHHHSTTSEEEEEEEEEEESSEEEEEEEEE-TTSHHHHT-TTTGGGGSGGGTTGGGGT-SHHHHHHTT-S-SS.TT-TT CS
  Ribosomal_L15e  96 slqaiaeervgrklpnlrvLnSYwvgeDgtykyyEvilvDpshkairndkkinwickkvhkhRelrGltsagkksRGlrkkglkgaek 183
                     sl+ +aeervgr++ nlrvLnSYwv++D+tyk+yEvi+vDpshkair+d++inwic++vhkhRe+rGlts gkksRG+  kg++++++
      EPX70618.1  97 SLRCTAEERVGRRCANLRVLNSYWVNQDATYKFYEVICVDPSHKAIRRDPRINWICNAVHKHREARGLTSIGKKSRGI-AKGHRFNNS 183
                     ******************************************************************************.99*999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       486  (0.0271069); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1421.28
//
Query:       EPX70619.1  [L=1003]
Description: transcription factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.3e-26   90.6   0.0    1.5e-25   89.8   0.0    1.4  1  Fungal_trans  Fungal specific transcription factor domain
    1.9e-09   37.5  13.8    1.9e-09   37.5  13.8    1.9  2  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.8   0.0   1.6e-29   1.5e-25       2     266 ..     439     704 ..     438     705 .. 0.83

  Alignments for each domain:
  == domain 1  score: 89.8 bits;  conditional E-value: 1.6e-29
  Fungal_trans   2 drffsnfh.pqfpilhkpsflpktssenssksayaspllllailalGalfsesetkesnssltsesqefiafplraeilihedfsspssslwilqsL 97 
                   ++ff  +h + ++++h+p+f+++       +++  +  l++a++a+ a+fs+  + + +++          ++ r +  + +  +  +++l  + +L
    EPX70619.1 439 EVFFHCCHgQAYNLFHRPTFFESL------NNNTIPLVLVYAMCAVSARFSSRMHDQYSPPYMAGE-----QFAREARRL-ALDNFDRPDLSLVAAL 523
                   58******9999************......9999999999**********9887766533333322.....233443333.4567778889****** PP

  Fungal_trans  98 lllelyektssdralherhhgvavrlarslgLhrnpsyvgkks......lwklweeeaesrrRlwwaaFylDktialklGrppllddsqinlpLPcd 188
                   lll+l  ++++++ + +++ g+a+r+a  l L+ ++ ++   +      +++ ++ e+e rrR++w++F +D++i++    ++l d+++i ++LP  
    EPX70619.1 524 LLLSLHDSGTGENGKSWMYGGMALRMAAALQLNCEQGSNP-LDldnidsGPRISFLERELRRRTFWSCFLMDRCISSHEHLQFL-DENDIGIQLP-- 616
                   *********************************7776655.55699******************************99988886.**********.. PP

  Fungal_trans 189 dddlwesddaseetlvetk...........lsneeksrkiasfllaLkkilskiagsllsiekqlqqrdlq..seklswveeleraldnWr 266
                    ++l ++ + +++t+  +            +s+ + ++  a +++++  i++  ++   + +++ ++rd +  ++ +s ++++++al +W+
    EPX70619.1 617 VHELLFTKQIAGVTQTLDGrilegvpsivvPSDTTENMGVAAYIVKIIVIWGRAVK---YFKHDGRRRDPHpfWHRNSDFTQISEALYKWA 704
                   45568888888888887778888888888888888888888888888888888888...66666666666666788888888888888885 PP

>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.5  13.8   2.1e-13   1.9e-09       2      39 ..      64     100 ..      63     101 .. 0.90
   2 ?   -2.1   0.3       0.5   4.5e+03      17      25 ..     809     817 ..     806     830 .. 0.66

  Alignments for each domain:
  == domain 1  score: 37.5 bits;  conditional E-value: 2.1e-13
                 S-HHHHHCT---STSSSS-HHHHHCTHHHCCCCTCCCE CS
     Zn_clus   2 aCdnCrkkKvKCdakkPaCsnCkklnleCtfysesskr 39 
                 aC++CrkkK+KC++++P+C +C k+n+ C+ y+   +r
  EPX70619.1  64 ACQTCRKKKIKCSGERPSCDQCLKHNTSCV-YKSNPRR 100
                 9*****************************.6665555 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.5
                 SSS-HHHHH CS
     Zn_clus  17 kPaCsnCkk 25 
                 ++ C +C+ 
  EPX70619.1 809 REMCLRCAN 817
                 566888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1003 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       862  (0.0480785); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.75u 0.30s 00:00:01.05 Elapsed: 00:00:00.46
# Mc/sec: 6607.06
//
Query:       EPX70620.1  [L=261]
Description: chalcone like protein family [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.9e-39  133.7   0.3      1e-38  133.2   0.3    1.2  1  Chalcone_2  Chalcone isomerase like


Domain annotation for each model (and alignments):
>> Chalcone_2  Chalcone isomerase like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.2   0.3   5.6e-43     1e-38       4     204 .]      69     248 ..      66     248 .. 0.91

  Alignments for each domain:
  == domain 1  score: 133.2 bits;  conditional E-value: 5.6e-43
  Chalcone_2   4 tLlGlGvRtVsflsiqVYvvGlYvaksdiaklqkvlqskllskkviattlvssekeelkkalldpekseelweelldegirtavrivPvrnTdfshLrD 102
                  LlG G R+Vsfl+i VY v lYv+k+d +++qkvl+++ ++            +  ++ +l++++ +++++ ell+++i++ vri P rnT+f+hL+ 
  EPX70620.1  69 FLLGSGPRYVSFLGIYVYDVELYVRKQDFRTIQKVLNEH-VD-----------PNMGVEMSLKEAQLGSRIIGELLKQKIQYSVRILPARNTNFKHLKG 155
                 69**********************************999.33...........34467777777788******************************** PP

  Chalcone_2 103 GfvraitarakkkkeeeedeefgeslkefkslFnrkgsvpkgkeLlLerdangeLsvlyedkkkkkleklGrvede..rvsrllwlnYLagkkvaseea 199
                 Gf++a+  r +++     de+ +++++ f+++F+  g++ ++++L ++++++++L + +ed+      ++G+++de   +s+l++++YL g+kv se+a
  EPX70620.1 156 GFTKAMVLRQNRD-----DEREERMIQSFQNTFPGTGTCLRSTNLSITLTDKQKLLFEHEDR------EIGSMQDEnlKLSNLFLQTYLVGNKVNSEQA 243
                 *******999888.....677789*****************************997777776......49*****955689****************** PP

  Chalcone_2 200 rksvv 204
                 r+sv+
  EPX70620.1 244 RQSVC 248
                 ***95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       779  (0.0434492); expected 358.6 (0.02)
Passed bias filter:                      544  (0.0303419); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1873.72
//
Query:       EPX70621.1  [L=400]
Description: chromodomain protein Chp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-16   60.5   1.3    2.6e-16   59.3   1.3    1.7  1  Chromo      Chromo (CHRromatin Organisation MOdifier) domain
    3.2e-05   23.7   0.0    9.3e-05   22.2   0.0    1.8  1  RRM_1       RNA recognition motif. (a.k.a. RRM, RBD, or RNP d
  ------ inclusion threshold ------
      0.056   13.6   0.1       0.11   12.6   0.1    1.5  1  Mtf2_C      Polycomb-like MTF2 factor 2
      0.084   12.7   0.2       0.24   11.2   0.2    1.8  1  DUF4909     Domain of unknown function (DUF4909)
       0.11   12.4   0.9       0.26   11.2   0.9    1.6  1  Tudor-knot  RNA binding activity-knot of a chromodomain


Domain annotation for each model (and alignments):
>> Chromo  Chromo (CHRromatin Organisation MOdifier) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.3   1.3   7.2e-20   2.6e-16       1      54 []      22      73 ..      22      73 .. 0.95

  Alignments for each domain:
  == domain 1  score: 59.3 bits;  conditional E-value: 7.2e-20
                EEEEEEEEEEEETTEECEEEEEEETTSTGGGTEEEEGGGCSSHSHHHHHHHHHH CS
      Chromo  1 yeVerIidhrtdkdgleleYlVKWkglpysentWEpeenlekcfqelideFkkr 54
                yeVerI+++r++k+g+  eY++KW g++ ++ntWEpeenl      +++ ++k+
  EPX70621.1 22 YEVERILADRVNKSGK-NEYYIKWVGYDSHDNTWEPEENLTGA-SMALKDWQKK 73
                89**************.************************88.8889999986 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.0   2.6e-08   9.3e-05       1      55 [.     265     318 ..     265     321 .. 0.95

  Alignments for each domain:
  == domain 1  score: 22.2 bits;  conditional E-value: 2.6e-08
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHH CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekA 55 
                 ++++++++++ e+++  +F  + +  +++++rd + ++  +a+V+F+s + A+ A
  EPX70621.1 265 IIISDITKSTAEKDIVSYFAYIPSNLDVRVYRD-HSSASDIAYVKFDSADYAKIA 318
                 68999***************************8.****************99977 PP

>> Mtf2_C  Polycomb-like MTF2 factor 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   3.1e-05      0.11      26      47 ..      26      47 ..      20      48 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 3.1e-05
      Mtf2_C 26 avlAkRvtpnGkvqYLieWeGa 47
                ++lA Rv  +Gk +Y i W G+
  EPX70621.1 26 RILADRVNKSGKNEYYIKWVGY 47
                69*****************997 PP

>> DUF4909  Domain of unknown function (DUF4909)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.2   6.7e-05      0.24      67     121 ..     275     330 ..     260     336 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 6.7e-05
     DUF4909  67 ykkdkvtyyvylienlddevfh.lsalqdmnripidiaddvatmgksphqndrmtl 121
                  +kd v+y+ y+  nld  v++  s+  d+  +  d ad         h n r++l
  EPX70621.1 275 AEKDIVSYFAYIPSNLDVRVYRdHSSASDIAYVKFDSADYAKIAYGKGHPNWRIAL 330
                 479*****************96368889**********987766666788888776 PP

>> Tudor-knot  RNA binding activity-knot of a chromodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.9   7.1e-05      0.26      20      52 ..      26      59 ..      13      61 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 7.1e-05
                EEEEEEE.TSSCEEEEEEETTS-CCC-EEEETTT CS
  Tudor-knot 20 eilsire.kkgkyeYYVHYeefNkRlDeWVsaer 52
                +il  r  k+gk+eYY+ +++++   + W ++e+
  EPX70621.1 26 RILADRVnKSGKNEYYIKWVGYDSHDNTWEPEEN 59
                57888888999***********987777766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (400 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1076  (0.0600145); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 3037.88
//
Query:       EPX70622.1  [L=214]
Description: GTPase Ypt3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.8e-63  213.0   0.8    2.1e-63  212.7   0.8    1.1  1  Ras          Ras family
    6.4e-35  120.0   0.2      1e-34  119.3   0.2    1.3  1  Roc          Ras of Complex, Roc, domain of DAPkinase
    1.3e-13   50.8   0.2    1.7e-13   50.4   0.2    1.1  1  Arf          ADP-ribosylation factor family
    1.5e-06   28.2   0.1       0.01   15.7   0.0    2.1  2  RsgA_GTPase  RsgA GTPase
    3.2e-06   27.2   0.1    5.5e-06   26.4   0.1    1.4  1  MMR_HSR1     50S ribosome-binding GTPase
    0.00025   20.6   0.2    0.00052   19.6   0.2    1.5  1  GTP_EFTU     Elongation factor Tu GTP binding domain
     0.0016   17.9   0.2     0.0025   17.2   0.2    1.3  1  Gtr1_RagA    Gtr1/RagA G protein conserved region
     0.0023   16.9   0.3     0.0026   16.7   0.3    1.1  1  DUF3533      Protein of unknown function (DUF3533)
  ------ inclusion threshold ------
      0.015   15.7   0.0      0.026   14.9   0.0    1.5  1  AAA_16       AAA ATPase domain
      0.018   15.3   0.1      0.081   13.2   0.1    2.2  2  AAA_22       AAA domain
      0.027   15.0   0.3      0.039   14.5   0.3    1.5  1  ABC_tran     ABC transporter
      0.028   13.9   0.0      0.042   13.3   0.0    1.4  1  SRPRB        Signal recognition particle receptor beta subuni
      0.049   13.4   0.0      0.068   13.0   0.0    1.3  1  AAA_21       AAA domain, putative AbiEii toxin, Type IV TA sy
      0.075   13.0   0.0       0.22   11.5   0.0    1.9  2  AAA_5        AAA domain (dynein-related subfamily)
       0.09   12.5   0.0       0.22   11.3   0.0    1.7  1  AAA_29       P-loop containing region of AAA domain
        0.1   12.1   0.2       0.81    9.2   0.0    1.9  2  FeoB_N       Ferrous iron transport protein B


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  212.7   0.8   1.9e-66   2.1e-63       1     160 [.      12     171 ..      12     173 .. 0.99

  Alignments for each domain:
  == domain 1  score: 212.7 bits;  conditional E-value: 1.9e-66
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeikr 99 
                 K vl+Gds+vGK++ll+rf++++F+ e++sTigv+f t++i +d+k++k +iwDTAGqe++++++++yyr+a g+l+vydit+++sf+nv +w++e+++
  EPX70622.1  12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELRE 110
                 89************************************************************************************************* PP

                 HSTTTSEEEEEEETTTGGGG-SS-HHHHHHHHHHHTSEEEEEBTTTTCTHHHHHHHHHHHH CS
         Ras 100 vaeenvpivLvGnKvDleekravsteegeelakelglkfletSAktnenveeafeellrei 160
                 +a++n++i+LvGnK+Dl + ravstee++++a e++l f+etSA ++ nveeaf+++l+ei
  EPX70622.1 111 HADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEI 171
                 *********************************************************9988 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.3   0.2   9.3e-38     1e-34       1     120 []      12     127 ..      12     127 .. 0.89

  Alignments for each domain:
  == domain 1  score: 119.3 bits;  conditional E-value: 9.3e-38
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE...GHHHHCHH CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd...srssenlk 96 
                 K vl+GdsgvGK+ ll rf++++f+ ++kstigv+f+t++++    ++n    kk+k +iWDtaGqer+r++++ y+r+a  a++vyd   ++s++n+ 
  EPX70622.1  12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIV----LDN----KKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDitkQSSFDNVG 102
                 889***********************************9983....322....5799*******************************754446799** PP

                 HHHHHHHHHCSSS.-EEEEEE-TTT CS
         Roc  97 eWlkelkkvagks.pvilvgnkiDl 120
                 +Wlkel+++a+++ +++lvgnk+Dl
  EPX70622.1 103 RWLKELREHADSNiVIMLVGNKTDL 127
                 *********997626679*****95 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.4   0.2   1.5e-16   1.7e-13      15     172 ..      11     168 ..       3     171 .. 0.82

  Alignments for each domain:
  == domain 1  score: 50.4 bits;  conditional E-value: 1.5e-16
                 EEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSSEEEEEEEE....TTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHHHHHHC CS
         Arf  15 lrilllGLDnaGKtTilkklkleelvt.tvPTigfnveelei....knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkall 108
                 ++ +l+G  + GK+ +l +++ +e++   + Tig +  + +i    k++k ++wD  Gqe+ R + + Y++   + + v D ++++ +++  + Lk+l 
  EPX70622.1  11 FKTVLIGDSGVGKSNLLMRFTRNEFNIeSKSTIGVEFATRNIvldnKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELR 109
                 688999*99**************9974389999987776444445599*************************99999*******************87 PP

                 TSGCCTTSEEEEEEE-TTST..TSS-HHHHHHHTTGGGSSSSSSEEEEEEBTTTTBTHHHHHHHHH CS
         Arf 109 eeeelkevallvlaNKqDlp..ealseeelrellgleelkgkrkleiqkcsavkgeglkeglewls 172
                 e+ + +++++++++NK Dl    a+s+ee ++  + ++l+       +++sa+  ++++e+++ + 
  EPX70622.1 110 EHAD-SNIVIMLVGNKTDLLhlRAVSTEEAQAFAAENNLS------FIETSAMDASNVEEAFQTVL 168
                 6665.67777888*****9622588888888877777776......67788888888888877665 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   9.2e-06      0.01     102     160 ..      13      68 ..       9      75 .. 0.64
   2 !   10.6   0.1   0.00035      0.39      20      95 ..      87     165 ..      83     179 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 9.2e-06
                  EEEECSTTSSHHHHHHHHCTT-----S-----------.---SEEEEEETTTEEEESS-S CS
  RsgA_GTPase 102 svlvGqSGvGKStLinallpelelktgevseklgrGkh.TTtavellelaegglliDtPG 160
                  +vl+G SGvGKS L+ +++ + e    ++ +k+  G    T++  l + + ++ + Dt G
   EPX70622.1  13 TVLIGDSGVGKSNLLMRFTRN-E---FNIESKSTIGVEfATRNIVLDNKKIKAQIWDTAG 68 
                  79************9998876.2...3344444455431444444444444566666655 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00035
                  EEEEESTTTT--HHHHHHHHHHH...HHTT-EEEEEEE-GGG--HHH.HHHHHHHHHHHTTSEEEE--TTTHTTHHHHHH CS
  RsgA_GTPase  20 livvslkepelslnlldrfLvla...eekgiepvivlnKiDlleeee.eleelkeelealgyevllvsaktkegleelke 95 
                  liv  ++ ++ s + + r L ++    +++i +++v nK+Dll+ +  ++ee ++  ++ +++++ +sa + +++ee  +
   EPX70622.1  87 LIVYDIT-KQSSFDNVGRWLKELrehADSNIVIMLVGNKTDLLHLRAvSTEEAQAFAAENNLSFIETSAMDASNVEEAFQ 165
                  5666666.56666677777665511145678888888*******999778888888899999999999998888875433 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   0.1   4.9e-09   5.5e-06       2     110 ..      13     118 ..      12     141 .. 0.65

  Alignments for each domain:
  == domain 1  score: 26.4 bits;  conditional E-value: 4.9e-09
                 EEEEESTTSSHHHHHHHHHTSTEEESSST.....TSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEETT.TTCSHHHH CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgekaivsdkp.....gtTrdinegrvklkgkeielvDtpGliegaseekglgkaflaleeadlillvvdas.eeklkpld 94 
                  +++G + vGKS L+ + t+++  +++k      ++Tr+i+  + k    + +++Dt+G  e   + + ++ a+ +   a  +l+v d++ +++++++ 
  EPX70622.1  13 TVLIGDSGVGKSNLLMRFTRNEFNIESKStigveFATRNIVLDNKK---IKAQIWDTAG-QE---RYRAITSAYYR--GAVGALIVYDITkQSSFDNVG 102
                 589*****************86555444412223666666666444...678*******.44...33356666663..467777777777333455555 PP

                 HHHHHHHHHTTSEEEE CS
    MMR_HSR1  95 eeleelleeakkplil 110
                 + l+el+e+a+ ++++
  EPX70622.1 103 RWLKELREHADSNIVI 118
                 5555554444444332 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.2   4.7e-07   0.00052      49     190 ..      38     169 ..      11     175 .. 0.75

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 4.7e-07
                 HHHHTSCSSCEEEEEETTCSSEEEEEEEESSSGGGHHHHHHHHHT-SEEEEEEETTTB.....STHHHHHHHHHHHHTTTEEEEEEESCGSTHHHHHHH CS
    GTP_EFTU  49 ErergiTiksaaisleketkkylinliDtPGHvdFskevirglrvlDgavlvvdaveG.....vepqteevlrlalkegvpiivfiNKmDrlkaelkei 142
                 E +  i ++ a+ ++  + kk + ++ Dt G + +   +++ +r + ga++v d+++      v    +e+ ++  + ++ i+++ NK D l+ +   +
  EPX70622.1  38 ESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQssfdnVGRWLKELREH-ADSNIVIMLVGNKTDLLHLR--AV 133
                 5555556666666666679*************************************774444244444444444.44677788899****99655..55 PP

                 HHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEBTTTTBTHHHHHHHHHH CS
    GTP_EFTU 143 veevkqklsrkeeklekygekgekevpvvfgSalkgegvktllealve 190
                  +e  q +          +++  ++ +++ +Sa+++ +v++ ++++ +
  EPX70622.1 134 STEEAQAF----------AAE--NNLSFIETSAMDASNVEEAFQTVLT 169
                 55555677..........222..3589999999999999988777765 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.2   2.2e-06    0.0025       2     173 ..      13     169 ..      12     180 .. 0.66

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 2.2e-06
   Gtr1_RagA   2 vLLmGksgsGKtsmrsiiFdnyla.rdtlrlgatidveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDvesreleedletlk 99 
                  +L+G sg GK+ +      n    +   ++g+   +++  v  +++++ ++wD  Gqe++ + +    +++    vg+li V D++    ++++++  
  EPX70622.1  13 TVLIGDSGVGKSNLLMRFTRNEFNiESKSTIGVEFATRN-IVLDNKKIKAQIWDTAGQERYRAIT----SAYYRGAVGALI-VYDIT---KQSSFDNVG 102
                 578999999999887665555443033344444444333.34467899***********998876....67777899**99.9****...567888888 PP

   Gtr1_RagA 100 eilealrqyspeakvfvli.hKmDliqedereeifeerkeeireeieklekeeiqffaTSiwdes.lykAfssivq 173
                 + l++lr++     v +l+ +K+Dl++   r+      +ee +  +++    +++f  TS +d s + +Af  + +
  EPX70622.1 103 RWLKELREHADSNIVIMLVgNKTDLLHL--RAVS----TEEAQAFAAEN---NLSFIETSAMDASnVEEAFQTVLT 169
                 999999998877777777658****942..2222....22222233332...377777888777634456666655 PP

>> DUF3533  Protein of unknown function (DUF3533)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.3   2.3e-06    0.0026      62     153 ..      81     177 ..      51     211 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 2.3e-06
     DUF3533  62 s....slgtwtvvnpsefkeseeeveelvhkekywgaivvkenateklyaal.sangassynstelleliyesgRdattvssyilpaltqleaaala 153
                       l+ +++ ++s+f+++   ++el  + +   +i+   n t+ l+  + s+++a+++ +++ l++i +s++da++v+++ ++ lt++ + + +
  EPX70622.1  81 RgavgALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAvSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSN 177
                 1333367779**************************************97777*********************************99998766555 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.0   2.3e-05     0.026      28     107 ..      14     151 ..      12     181 .. 0.54

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 2.3e-05
      AAA_16  28 llsGesGvGKsslvrellr...alekd.........ggiflrgkcdqlesaipy.salaqalareellrqllde.................aesaelea 96 
                 +l+G+sGvGKs l+ ++ r    +e +         +      + +    +    +++++++ + e +r++ ++                 ++ +++++
  EPX70622.1  14 VLIGDSGVGKSNLLMRFTRnefNIESKstigvefatR------NIVLD--NKKIkAQIWDTAGQ-ERYRAITSAyyrgavgalivyditkqSSFDNVGR 103
                 799***********99997655444446553333331......22222..11111224444423.4444444444444444444444444488888888 PP

      AAA_16  97 wrekleeala.....................................a 107
                 w ++l+e +                                      +
  EPX70622.1 104 WLKELREHADsnivimlvgnktdllhlravsteeaqafaaennlsfiE 151
                 888888877788888888777777755555544444444444443332 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   7.2e-05     0.081       8      50 ..      13      50 ..      12     168 .. 0.65
   2 ?   -1.0   0.0       1.8     2e+03      29      61 ..     136     172 ..     127     191 .. 0.54

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 7.2e-05
      AAA_22  8 lvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpss 50
                +v++G sG+GK+ ll r++++  +      e+++++ v+ +  
  EPX70622.1 13 TVLIGDSGVGKSNLLMRFTRNEFN-----IESKSTIGVEFATR 50
                589*********999998877521.....13444444444443 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 1.8
      AAA_22  29 ldeeakaeeerpevv...fvtlpsst.sskdllrell 61 
                  +++a+a+e++ +++    +++++ +   +++l+e++
  EPX70622.1 136 EEAQAFAAENNLSFIetsAMDASNVEeAFQTVLTEIF 172
                 3444555555555553333333333334444444444 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.3   3.5e-05     0.039      13      47 ..      12      57 ..      11     162 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 3.5e-05
                EEEEEESTTSSHHHHHHHHTTSS--SEEEE...........EETTC CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...........xxxxx RF
    ABC_tran 13 kvaivGenGaGKStLlkllagllkpteGei...........lldgk 47
                k++++G++G GKS Ll+ +++++ + e +             ld+k
  EPX70622.1 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKStigvefatrniVLDNK 57
                579*****************99887555542233333333333333 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   3.8e-05     0.042       7     126 ..      14     129 ..      10     173 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 3.8e-05
                 EEE-STTSSHHHHHHHHHHSS---B---S.S-EEETTG.....GGTT-SEEEETT-GCCSHHHHHHHHHHGGEEEEEEEEETTS-HHHHHHHHHHHHHH CS
       SRPRB   7 llvGlsdsGKTslftrLttdsvkktvtSq.essaalkv..ksekgskltliDfPGheklrqklleklkaksslkglvfvvDStidpkevkevAEllyei 102
                 +l+G s  GK  l+ r t ++++    S    ++a++    ++k+ k ++ D  G+e+ r   + +  ++  + +l  v D t ++    +v  +l e+
  EPX70622.1  14 VLIGDSGVGKSNLLMRFTRNEFNIESKSTiGVEFATRNivLDNKKIKAQIWDTAGQERYRAITSAY--YRGAVGAL-IVYDIT-KQSSFDNVGRWLKEL 108
                 789*****************8876666655555555543589999************999755544..55445444.466665.566778888888776 PP

                 HHHHHHHTT---EEEEEE-TTSTT CS
       SRPRB 103 lliteklkdavdiliACnKqelfl 126
                   +   +  ++ i++  nK +l  
  EPX70622.1 109 REH---ADSNIVIMLVGNKTDLLH 129
                 443...346777777788887765 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   6.1e-05     0.068       2      17 ..      13      28 ..      12      83 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 6.1e-05
      AAA_21  2 nvliGpNgsGKSnLLd 17
                +vliG+ g+GKSnLL 
  EPX70622.1 13 TVLIGDSGVGKSNLLM 28
                8*************96 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00019      0.22       3      21 ..      14      32 ..      12      83 .. 0.92
   2 ?   -1.0   0.0       1.4   1.6e+03      64      76 ..     159     173 ..     112     210 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00019
                EEE--SSSSHHHHHHHGGG CS
       AAA_5  3 lLvGppGtgKselaerlaa 21
                +L+G++G+gKs l +r+ +
  EPX70622.1 14 VLIGDSGVGKSNLLMRFTR 32
                8**************9976 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 1.4
                 -..G-SEEEEESGGG CS
       AAA_5  64 r..egeilvlDEver 76 
                 +  e+  +vl E++r
  EPX70622.1 159 NveEAFQTVLTEIFR 173
                 233333344444443 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0    0.0002      0.22      25      39 ..      13      27 ..       5      39 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.0002
      AAA_29 25 tlltGpsGsGKSTll 39
                t+l+G+sG+GKS ll
  EPX70622.1 13 TVLIGDSGVGKSNLL 27
                89**********997 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.0   0.00072      0.81       2      56 ..      12      68 ..      11      81 .. 0.83
   2 ?    1.0   0.1      0.24   2.7e+02     102     154 ..     112     165 ..      86     167 .. 0.75

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00072
                EEEEEESTTSSHHHHHHHHHTTSEEEEESTTSSSEEEEEEEEETTEEE..EEEE--- CS
      FeoB_N  2 tvalvGnpnvGkttlfnaltgakqkvgNwpGvtvekkegklklkgkev..eivDlPG 56
                + +l+G+  vGk+ l+ + t  + ++   + + ve ++ ++ l++k++  +i D  G
  EPX70622.1 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIkaQIWDTAG 68
                5789************************99999999888887777554226778766 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.24
                 HHTTSSEEEEEETHHHHHHTTEEE-H.HHHHHHHTS-EEEEBTTTTBTHHHHHH CS
      FeoB_N 102 lelgvpvvlalnmideaekkgieidl.kkLsekLgvpvvktsakkkegieellk 154
                 ++ ++ ++l+ n++d ++ + ++ ++ ++++++ ++  ++tsa + +++ee  +
  EPX70622.1 112 ADSNIVIMLVGNKTDLLHLRAVSTEEaQAFAAENNLSFIETSAMDASNVEEAFQ 165
                 455556666668999988888777541668888899999999999999998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       592  (0.0330191); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.47u 0.28s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 1548.23
//
Query:       EPX70623.1  [L=459]
Description: serine hydroxymethyltransferase Shm2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   3.6e-203  674.6   0.0   4.1e-203  674.3   0.0    1.0  1  SHMT             Serine hydroxymethyltransferase
  ------ inclusion threshold ------
      0.079   12.3   0.0       0.17   11.2   0.0    1.5  1  DegT_DnrJ_EryC1  DegT/DnrJ/EryC1/StrS aminotransferase family


Domain annotation for each model (and alignments):
>> SHMT  Serine hydroxymethyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  674.3   0.0  4.6e-207  4.1e-203       3     399 .]      37     433 ..      35     433 .. 0.99

  Alignments for each domain:
  == domain 1  score: 674.3 bits;  conditional E-value: 4.6e-207
                 HHTHHHHHHHHHHHHHHHHSEE-STT-----HHHHHHHTSGGGG----EETTEESSST-HHHHHHHHHHHHHHHHHCT-STTTEEEE---SSHHHHHHH CS
        SHMT   3 esdpevaeiikkekerqkeeieliasenftskavlealGsvltnkyaeGyPGkryyGGcefvdeveelaqdrakelfkldpakwgvnvqplsGsqanla 101
                 ++dpev +i+k+e++rqke+i liasenftskav+++lGsv++nky+eGyPG+ryyGG+e++d++e+l+q+ra+e+f+ldp+ wgvnvqp+sGs+anl+
  EPX70623.1  37 QYDPEVGNILKSEEKRQKESIGLIASENFTSKAVMDVLGSVMQNKYSEGYPGARYYGGNEIIDQAESLCQKRALEVFQLDPELWGVNVQPHSGSPANLQ 135
                 79************************************************************************************************* PP

                 HHHHHT-TT-EEEEESCTTTSTGGGT-BTSS-B-SHHHHHSEEEEE-B-TTTSSB-HHHHHHHHHHH--SEEEEE-SST-S---HHHHHHHHHHTT-EE CS
        SHMT 102 vytallepgdrilgldladGGhlthGakveskkisassklfesveykvdketglidydelekkakefkPklivaGtsaysrlidyarlreiadevgayl 200
                  y+a+++p+dr++gldl++GGhl+hG+++ +k isa+s++f +++y+v+++tg+idy++l k+ak+f+Pk ivaG+saysrlidy+r+r iade++ayl
  EPX70623.1 136 AYQAIMKPHDRLMGLDLPHGGHLSHGFATPQKSISAVSTYFSTMPYGVNPKTGIIDYEDLSKSAKKFRPKAIVAGASAYSRLIDYKRMRMIADECNAYL 234
                 *************************************************************************************************** PP

                 EEE-GGGHHHHHTTSS--GCCTSSEEEEESSSTT-S-S-EEEEEC-SEEEEETTTEEEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHCTSHHHH CS
        SHMT 201 lvdmahiaGlvaagvipsPfeyadvvtttthktlrGprgglillrkgvksvdktgkevleelekkinsavfPglqGGPlnhviaakavalkealepefk 299
                 l+dmahi+Glvaa vipsPfe+ad+vtttthk+lrGprg++i++r+g+++ dk+g+ v ++le+kin++vfPg+qGGP+nh+i+a+aval++a +pef 
  EPX70623.1 235 LCDMAHISGLVAARVIPSPFEFADIVTTTTHKSLRGPRGAMIFFRRGLRKHDKKGNPVYYDLEEKINFSVFPGHQGGPHNHTITALAVALGQAKTPEFV 333
                 *************************************************************************************************** PP

                 HHHHHHHHHHHHHHHHHHHTT-EEGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTSSTTTT-SEEEEESHHHHHTT--HHHHHHHHHH CS
        SHMT 300 vyqkqvlknakalaealkekgyklvsgGtdnhlvlvdlrekgldGkraekvlekvnitankntvPgdksalvtsGlrlGtpaltsrgfkeedlekvakf 398
                  yqk+v++naka+a+a+++kgy+lvsgGtd+hl+lvdl++kg+dG+r+e+vle +n++ankntvPgdksal++ Glr+Gtpa+t+rgf+e+d+ k++++
  EPX70623.1 334 DYQKNVVNNAKAMADAFVNKGYELVSGGTDTHLILVDLTNKGIDGARVERVLELINVSANKNTVPGDKSALIPHGLRIGTPACTTRGFNEQDFIKIVDL 432
                 ***********************************************************************************************9987 PP

                 H CS
        SHMT 399 i 399
                 i
  EPX70623.1 433 I 433
                 6 PP

>> DegT_DnrJ_EryC1  DegT/DnrJ/EryC1/StrS aminotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   1.9e-05      0.17      86     150 ..     177     243 ..     159     248 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 1.9e-05
                      EEEEE-B-TTTSSB-GGGCGGG--TTE.EEEEE.B-GGGB---HHHHHHHHHHCT-EEEEE-TT-TT CS
  DegT_DnrJ_EryC1  86 kpvfvDvdpdtynidpaaieaaitert.kaIlp.VhlyGqvadmdalkaiaakhglkvieDaAhAlG 150
                       +++  v+p+t  id +++ +   + + kaI++ + +y++  d ++++ ia++ + +++ D Ah  G
       EPX70623.1 177 STMPYGVNPKTGIIDYEDLSKSAKKFRpKAIVAgASAYSRLIDYKRMRMIADECNAYLLCDMAHISG 243
                      5667789***********99988887779*997589***************************9666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (459 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       352  (0.019633); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 3166.70
//
Query:       EPX70624.1  [L=2670]
Description: translation elongation regulator Gcn1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.9e-38  127.2  26.7     0.0012   18.9   0.0   19.7 20  HEAT           HEAT repeat
    2.4e-31  107.8  32.9      0.029   14.9   0.0   17.3 17  HEAT_EZ        HEAT-like repeat
    8.2e-31  107.6   1.8    8.2e-31  107.6   1.8    3.9  4  Gcn1_N         Generalcontrol nonderepressible 1 (Gcn1) N-ter
    2.7e-29  101.4  25.3    4.4e-05   23.8   0.0   12.5 14  HEAT_2         HEAT repeats
    1.8e-17   63.9  22.1       0.18   11.9   2.2   12.0 13  Cnd1           non-SMC mitotic condensation complex subunit 1
    8.6e-15   54.9   9.4    2.2e-06   27.4   0.0    9.2 10  CLASP_N        CLASP N terminal
    9.4e-12   45.4   0.0        1.1    9.9   0.0    8.0  8  Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
    1.6e-05   25.1   3.7        4.4    7.7   0.0    7.1  6  Cohesin_HEAT   HEAT repeat associated with sister chromatid c
    0.00013   22.2   8.8       0.94    9.6   0.0    7.4  8  ParcG          Parkin co-regulated protein
  ------ inclusion threshold ------
      0.076   12.5   0.4       0.18   11.3   0.4    1.5  1  Tab2_like      RNA-binding protein Tab2/Atab2
        0.1   12.9   1.0        5.1    7.4   0.0    4.1  3  RICTOR_V       Rapamycin-insensitive companion of mTOR, domai
       0.14   12.9   7.7         17    6.5   0.1    7.0  5  HEAT_PBS       PBS lyase HEAT-like repeat
       0.78   10.0  10.5      0.083   13.2   0.1    4.2  3  FANCI_S2       FANCI solenoid 2


Domain annotation for each model (and alignments):
>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0   0.00027      0.37       2      30 ..     322     350 ..     321     351 .. 0.92
   2 ?    6.2   0.0      0.01        14       3      26 ..    1066    1089 ..    1065    1090 .. 0.89
   3 ?   -2.2   0.0       5.5   7.6e+03      13      31 .]    1293    1311 ..    1291    1311 .. 0.87
   4 ?    4.8   0.1     0.031        42       2      30 ..    1322    1350 ..    1321    1351 .. 0.88
   5 ?   -3.0   0.0       9.7   1.3e+04      13      28 ..    1412    1427 ..    1407    1429 .. 0.86
   6 !   17.0   0.0   3.7e-06     0.005       1      30 [.    1441    1470 ..    1441    1471 .. 0.95
   7 ?    2.6   0.0      0.15     2e+02       1      27 [.    1479    1505 ..    1479    1507 .. 0.91
   8 ?    5.9   0.0     0.013        18       1      30 [.    1520    1549 ..    1520    1550 .. 0.90
   9 ?    0.4   0.0      0.79   1.1e+03       1      12 [.    1558    1569 ..    1558    1571 .. 0.91
  10 !   18.9   0.0   8.9e-07    0.0012       1      30 [.    1639    1668 ..    1639    1669 .. 0.96
  11 ?    5.0   0.0     0.026        37       1      30 [.    1677    1707 ..    1677    1708 .. 0.93
  12 ?    0.3   0.0      0.85   1.2e+03       1      21 [.    1716    1736 ..    1716    1740 .. 0.87
  13 ?    3.0   0.0      0.12   1.6e+02       2      23 ..    1758    1779 ..    1757    1787 .. 0.88
  14 !   13.5   0.0   4.7e-05     0.064       1      29 [.    1795    1823 ..    1795    1825 .. 0.93
  15 ?    2.7   0.0      0.15     2e+02       4      29 ..    1909    1934 ..    1906    1936 .. 0.74
  16 !   13.2   0.0   5.8e-05      0.08       5      28 ..    1990    2013 ..    1986    2016 .. 0.86
  17 ?   -0.4   0.0       1.4     2e+03       1      20 [.    2024    2044 ..    2024    2048 .. 0.77
  18 ?    1.7   0.1       0.3   4.2e+02       3      29 ..    2177    2203 ..    2176    2205 .. 0.86
  19 ?    3.5   0.0     0.081   1.1e+02       1      28 [.    2243    2270 ..    2243    2272 .. 0.94
  20 !   11.9   0.0   0.00015      0.21       3      28 ..    2329    2355 ..    2327    2357 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00027
                 HHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgalaev 30 
                  +++ ++l+++++ VR++++ ++  l+++
  EPX70624.1 322 YDTFASNLKSSNATVRQNCFHTFSVLCKH 350
                 678999*********************98 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.01
                  HHHHHHHT-SSHHHHHHHHHHHHH CS
        HEAT    3 PlllkllsDpspeVReaAakaLga 26  
                   lll+  ++++ +VR+a++++L  
  EPX70624.1 1066 KLLLEHTCHNETSVRSAVLQSLQV 1089
                  689999***************976 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 5.5
                  SHHHHHHHHHHHHHHHHCS CS
        HEAT   13 speVReaAakaLgalaevl 31  
                  + + Rea++  +g++a++l
  EPX70624.1 1293 NDRLREATVVLFGTVAQHL 1311
                  5678************986 PP

  == domain 4  score: 4.8 bits;  conditional E-value: 0.031
                  HHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT    2 lPlllkllsDpspeVReaAakaLgalaev 30  
                  l  l+++ls ps +V  a+a ++  l+++
  EPX70624.1 1322 LENLISALSTPSESVQLAVASCISPLIKK 1350
                  77899999***************988875 PP

  == domain 5  score: -3.0 bits;  conditional E-value: 9.7
                  SHHHHHHHHHHHHHHH CS
        HEAT   13 speVReaAakaLgala 28  
                  s+++R+ A+ ++ a++
  EPX70624.1 1412 SSSIRQGALFCVEAFS 1427
                  7899*******98886 PP

  == domain 6  score: 17.0 bits;  conditional E-value: 3.7e-06
                  HHHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT    1 llPlllkllsDpspeVReaAakaLgalaev 30  
                  llPlll+   D+++eVRea+++a+ +++++
  EPX70624.1 1441 LLPLLLSSFGDSASEVREATLEAVKHIMSQ 1470
                  89************************9986 PP

  == domain 7  score: 2.6 bits;  conditional E-value: 0.15
                  HHHHHHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT    1 llPlllkllsDpspeVReaAakaLgal 27  
                  llP ll  l+D +++  +a+++ Lg +
  EPX70624.1 1479 LLPSLLDGLNDYNWRSKRASVEILGLM 1505
                  89**************99999999865 PP

  == domain 8  score: 5.9 bits;  conditional E-value: 0.013
                  HHHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT    1 llPlllkllsDpspeVReaAakaLgalaev 30  
                  ++P l + l+D++++VR +A ++L ++ ev
  EPX70624.1 1520 IVPKLTEVLTDSHSQVRNTANNSLLRFGEV 1549
                  799*****************9999888776 PP

  == domain 9  score: 0.4 bits;  conditional E-value: 0.79
                  HHHHHHHHHT-S CS
        HEAT    1 llPlllkllsDp 12  
                  l+P+llk+lsD+
  EPX70624.1 1558 LVPVLLKALSDC 1569
                  79*********7 PP

  == domain 10  score: 18.9 bits;  conditional E-value: 8.9e-07
                  HHHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT    1 llPlllkllsDpspeVReaAakaLgalaev 30  
                  l+P l + l Dp p+ R++AakaLg l+e+
  EPX70624.1 1639 LMPRLREVLIDPVPDTRATAAKALGSLMEK 1668
                  89*************************997 PP

  == domain 11  score: 5.0 bits;  conditional E-value: 0.026
                  HHHHHHHHHT-SSHHH.HHHHHHHHHHHHHC CS
        HEAT    1 llPlllkllsDpspeV.ReaAakaLgalaev 30  
                  l+P l + l+++++eV R+ Aa+ L +++++
  EPX70624.1 1677 LIPELFNVLRSECSEVdRQGAAQGLSEVLSG 1707
                  7999**********************99887 PP

  == domain 12  score: 0.3 bits;  conditional E-value: 0.85
                  HHHHHHHHHT-SSHHHHHHHH CS
        HEAT    1 llPlllkllsDpspeVReaAa 21  
                  +lP +l++ s+p + +Re+ +
  EPX70624.1 1716 VLPEILQNTSSPTAYIRESFI 1736
                  69***************9855 PP

  == domain 13  score: 3.0 bits;  conditional E-value: 0.12
                  HHHHHHHHT-SSHHHHHHHHHH CS
        HEAT    2 lPlllkllsDpspeVReaAaka 23  
                  +P++l  l D+s  V  a+++a
  EPX70624.1 1758 IPPILAGLADESELVQTASLRA 1779
                  799***************9988 PP

  == domain 14  score: 13.5 bits;  conditional E-value: 4.7e-05
                  HHHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT    1 llPlllkllsDpspeVReaAakaLgalae 29  
                  llP l k l D+s+++R ++++ +g+l+ 
  EPX70624.1 1795 LLPELEKGLFDDSWRIRLSSVQLVGDLIY 1823
                  89***********************9975 PP

  == domain 15  score: 2.7 bits;  conditional E-value: 0.15
                  HHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT    4 lllkllsDpspeVReaAakaLgalae 29  
                  l++ +l++   + R++++k+Lg+l++
  EPX70624.1 1909 LIIGNLNSAGNDRRAMCVKSLGDLSK 1934
                  5677775544455***********98 PP

  == domain 16  score: 13.2 bits;  conditional E-value: 5.8e-05
                  HHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT    5 llkllsDpspeVReaAakaLgala 28  
                  + ++l+D++ eVReaAa+a+ +l 
  EPX70624.1 1990 VREALMDSDLEVREAAAEAFDTLQ 2013
                  6789****************9886 PP

  == domain 17  score: -0.4 bits;  conditional E-value: 1.4
                  HHHHHHHHH.T-SSHHHHHHH CS
        HEAT    1 llPlllkll.sDpspeVReaA 20  
                  +lP llkll sD+ +e   +A
  EPX70624.1 2024 VLPELLKLLeSDDKSEHALSA 2044
                  69*******888777665555 PP

  == domain 18  score: 1.7 bits;  conditional E-value: 0.3
                  HHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT    3 PlllkllsDpspeVReaAakaLgalae 29  
                   +l++l +D s+eV +aA+ a  al +
  EPX70624.1 2177 SHLVRLFEDRSSEVIAAAVAAQNALTS 2203
                  6899999************99877765 PP

  == domain 19  score: 3.5 bits;  conditional E-value: 0.081
                  HHHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT    1 llPlllkllsDpspeVReaAakaLgala 28  
                  +lP++l+ +++   e+Re +a+ +++++
  EPX70624.1 2243 VLPIFLHGIMHGTNEQREQSALGVADIV 2270
                  69*********************99997 PP

  == domain 20  score: 11.9 bits;  conditional E-value: 0.00015
                  HHHHHHHT-SSHHH.HHHHHHHHHHHH CS
        HEAT    3 PlllkllsDpspeV.ReaAakaLgala 28  
                   ++ k l Dps+eV R+ Aa aLg+l+
  EPX70624.1 2329 RTFAKSLGDPSSEViRSRAATALGTLI 2355
                  57999********88*********996 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.0    0.0032       4.4      14      54 ..     306     346 ..     291     347 .. 0.83
   2 ?    5.7   0.2     0.016        22       2      53 ..    1295    1345 ..    1294    1347 .. 0.85
   3 !   12.4   0.0   0.00012      0.17      22      51 ..    1434    1463 ..    1415    1467 .. 0.89
   4 !   14.6   0.0   2.7e-05     0.037       1      49 [.    1492    1540 ..    1492    1543 .. 0.93
   5 ?    2.1   0.0      0.21   2.9e+02      23      40 ..    1552    1569 ..    1548    1573 .. 0.89
   6 !   13.1   0.1   7.8e-05      0.11      18      55 .]    1628    1665 ..    1612    1665 .. 0.89
   7 !    7.7   0.0    0.0037       5.1      27      54 ..    1675    1703 ..    1668    1704 .. 0.91
   8 !    7.9   0.0    0.0032       4.4      23      51 ..    1751    1779 ..    1744    1779 .. 0.89
   9 ?    0.3   0.0      0.76     1e+03      25      49 ..    1791    1815 ..    1786    1821 .. 0.78
  10 ?    2.8   0.0      0.13   1.8e+02      16      54 ..    1935    1969 ..    1921    1970 .. 0.72
  11 !    7.7   0.0    0.0036         5      33      52 ..    1990    2009 ..    1976    2012 .. 0.79
  12 !   13.1   0.7   7.3e-05       0.1       2      42 ..    2000    2037 ..    1999    2045 .. 0.86
  13 ?    4.8   0.3     0.029        40       7      46 ..    2073    2108 ..    2071    2116 .. 0.84
  14 ?   -0.9   0.0       1.8   2.5e+03      26      49 ..    2172    2195 ..    2170    2197 .. 0.78
  15 ?    3.0   0.0      0.11   1.5e+02       3      52 ..    2258    2309 ..    2256    2312 .. 0.78
  16 !   14.9   0.0   2.1e-05     0.029      17      55 .]    2315    2354 ..    2300    2354 .. 0.86
  17 ?   -0.6   0.1       1.4     2e+03      22      52 ..    2357    2387 ..    2356    2387 .. 0.86

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0032
     HEAT_EZ  14 laggepellqplvpeilpaLlalLnddsdeVRaaAagaLgn 54 
                 l   ++++ ++l++++ + +++ L++++++VR+++ ++++ 
  EPX70624.1 306 LSDSGKDASSLLLSRLYDTFASNLKSSNATVRQNCFHTFSV 346
                 55778889999************************999986 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.016
     HEAT_EZ    2 rvRraAawaLGrlaggepellqplvpeilpaLlalLnddsdeVRaaAagaLg 53  
                  r+R+a +  +G++a++  e +q lv  +l  L+++L+++s +V+ a+a +++
  EPX70624.1 1295 RLREATVVLFGTVAQHLQENDQRLVV-VLENLISALSTPSESVQLAVASCIS 1345
                  78888888899988888888887777.9*******************99987 PP

  == domain 3  score: 12.4 bits;  conditional E-value: 0.00012
     HEAT_EZ   22 lqplvpeilpaLlalLnddsdeVRaaAaga 51  
                   +p++p++lp+Ll+   d+ +eVR+a++ a
  EPX70624.1 1434 FEPYLPDLLPLLLSSFGDSASEVREATLEA 1463
                  689************************987 PP

  == domain 4  score: 14.6 bits;  conditional E-value: 2.7e-05
     HEAT_EZ    1 wrvRraAawaLGrlaggepellqplvpeilpaLlalLnddsdeVRaaAa 49  
                  wr +ra +  LG +  ++p +l+  +p i+p L   L+d+++ VR +A 
  EPX70624.1 1492 WRSKRASVEILGLMSYMAPKQLSVSLPTIVPKLTEVLTDSHSQVRNTAN 1540
                  7889999999*9999999****************************996 PP

  == domain 5  score: 2.1 bits;  conditional E-value: 0.21
     HEAT_EZ   23 qplvpeilpaLlalLndd 40  
                  +p+++ ++p Ll++L+d+
  EPX70624.1 1552 NPEIQNLVPVLLKALSDC 1569
                  5899***********997 PP

  == domain 6  score: 13.1 bits;  conditional E-value: 7.8e-05
     HEAT_EZ   18 epellqplvpeilpaLlalLnddsdeVRaaAagaLgnl 55  
                  epe l+ +++ ++p L   L d+ +++Ra+Aa aLg l
  EPX70624.1 1628 EPENLAIYLDPLMPRLREVLIDPVPDTRATAAKALGSL 1665
                  678888999***************************86 PP

  == domain 7  score: 7.7 bits;  conditional E-value: 0.0037
     HEAT_EZ   27 peilpaLlalLnddsdeV.RaaAagaLgn 54  
                  p ++p+L + L+++++eV R+ Aa  L+ 
  EPX70624.1 1675 PTLIPELFNVLRSECSEVdRQGAAQGLSE 1703
                  789*********************99985 PP

  == domain 8  score: 7.9 bits;  conditional E-value: 0.0032
     HEAT_EZ   23 qplvpeilpaLlalLnddsdeVRaaAaga 51  
                  qp++ +++p+ la+L d+s +V++a+++a
  EPX70624.1 1751 QPYLARAIPPILAGLADESELVQTASLRA 1779
                  88999999999999999999******998 PP

  == domain 9  score: 0.3 bits;  conditional E-value: 0.76
     HEAT_EZ   25 lvpeilpaLlalLnddsdeVRaaAa 49  
                  +v+ +lp+L ++L dds ++R  ++
  EPX70624.1 1791 AVDLLLPELEKGLFDDSWRIRLSSV 1815
                  78899*********99866666555 PP

  == domain 10  score: 2.8 bits;  conditional E-value: 0.13
     HEAT_EZ   16 ggepellqplvpeilpaLlalLnddsdeV.RaaAagaLgn 54  
                    +++ l++l+p + + L      +sd+  R  +++aL  
  EPX70624.1 1935 KAGFDVLSQLLPSLKDGLE-----SSDREnRIGVCIALQE 1969
                  5567777777777777777.....899777********86 PP

  == domain 11  score: 7.7 bits;  conditional E-value: 0.0036
     HEAT_EZ   33 LlalLnddsdeVRaaAagaL 52  
                     +L+d++ eVR+aAa a+
  EPX70624.1 1990 VREALMDSDLEVREAAAEAF 2009
                  5678999999*******996 PP

  == domain 12  score: 13.1 bits;  conditional E-value: 7.3e-05
     HEAT_EZ    2 rvRraAawaLGrlaggepellqplvpeilpaLlalLnddsd 42  
                  +vR+aAa a+ +l          +v+e+lp+Ll+lL++d++
  EPX70624.1 2000 EVREAAAEAFDTLQ---TVIGDRAVDEVLPELLKLLESDDK 2037
                  69********8655...7778889************99998 PP

  == domain 13  score: 4.8 bits;  conditional E-value: 0.029
     HEAT_EZ    7 AawaLGrlaggepellqplvpeilpaLlalLnddsdeV.Ra 46  
                  +a+aL++la+ ++ +l+  +p il aL+     +s +V + 
  EPX70624.1 2073 NARALASLAQAAGSTLNRRLPSILNALM-----ESILVaKD 2108
                  799************************9.....88777555 PP

  == domain 14  score: -0.9 bits;  conditional E-value: 1.8
     HEAT_EZ   26 vpeilpaLlalLnddsdeVRaaAa 49  
                  vp+ +  L++l +d s+eV aaA+
  EPX70624.1 2172 VPDWISHLVRLFEDRSSEVIAAAV 2195
                  6777899************55554 PP

  == domain 15  score: 3.0 bits;  conditional E-value: 0.11
     HEAT_EZ    3 vRraAawaLGr.laggepellqplvpeilpaLlalLnddsd.eVRaaAagaL 52  
                  +R+  a++++  +   e++ l+p+v++i  +L++      + eV+ a +++L
  EPX70624.1 2258 QREQSALGVADiVTRAEADKLRPYVTQITGPLIRIIGERFPvEVKSAILYTL 2309
                  6778888887685566999**************9887777777777777766 PP

  == domain 16  score: 14.9 bits;  conditional E-value: 2.1e-05
     HEAT_EZ   17 gepellqplvpeilpaLlalLnddsdeV.RaaAagaLgnl 55  
                    p  l+p++p++ + +++ L d+s+eV R  Aa aLg l
  EPX70624.1 2315 KIPTFLRPFLPQLQRTFAKSLGDPSSEViRSRAATALGTL 2354
                  5577799******************************976 PP

  == domain 17  score: -0.6 bits;  conditional E-value: 1.4
     HEAT_EZ   22 lqplvpeilpaLlalLnddsdeVRaaAagaL 52  
                  lq+ +  i+ +L+++ +++++ VR+a + aL
  EPX70624.1 2357 LQTRLAPIVTELVSGARTPDAGVRKAMLNAL 2387
                  6778889*****************9977776 PP

>> Gcn1_N  Generalcontrol nonderepressible 1 (Gcn1) N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.6   1.8   5.9e-34   8.2e-31       2     357 ..     377     721 ..     376     722 .. 0.88
   2 ?   -2.0   0.0       1.2   1.7e+03     231     267 ..    1870    1905 ..    1865    1955 .. 0.81
   3 ?   -1.7   0.3         1   1.4e+03     244     327 ..    2039    2121 ..    2031    2127 .. 0.61
   4 ?   -1.2   0.0      0.68   9.4e+02     239     278 ..    2376    2415 ..    2347    2426 .. 0.69

  Alignments for each domain:
  == domain 1  score: 107.6 bits;  conditional E-value: 5.9e-34
      Gcn1_N   2 dhRvllaemLsalppsesvsskileglapllaKEtnEaalaaevsalakhltfllksgvevpkkvvdaivkGladkKppvRrlwalrvGevlwnleeel 100
                 +hR l++e Ls l+ +e  s+++l++++pl+ K   E +   ++++++++++ +l s+++++k ++d + k l    +  R  w+l++++++w+ ++  
  EPX70624.1 377 EHRNLYMECLSHLSVKEIDSTSLLKEVLPLFMKV-QESSFYHLAAVIIRNIKSILLSNSSLDKGIYDFLSKSLDKPVAYERQHWILALADLVWDSQT-- 472
                 9********************************5.69*********************************************************994.. PP

      Gcn1_N 101 lsssvaaskfaeavlpkLektlkevvanPlpaaqsglvseayvvlalllgrlsssgsskvesllkkasivkqllalepKpsfLlnpkvYsKltseedlk 199
                  +ss  + ++ + +l+ L k  + + +nP++a+q+g + +  v+l l++++ s+ g+ ++ ++    ++    l+++   s+L + k  +Klt+++   
  EPX70624.1 473 NESS--QLELNNFYLEHLNKLSQATLNNPTTALQNGSILAPVVYLCLMSKKESD-GDISKLKFTGDLQTLLDGLVNSTGESILFSNKYSNKLTTDQAKL 568
                 3333..5899999***********************************766655.56666667777778888899999********************* PP

      Gcn1_N 200 WllRAlaavasalkeesseeaaktawaqafiylivsssvspevRrealealsklyaanpelvskviiealwswlesleeaekdsaavlaktenenLslv 298
                 W +R l ++as  ++  + ++++++w q++i l   +   ++  r a eal+ ++ +np+l  k+i + lw+   ++e+a+kd   +  ++ n++L ++
  EPX70624.1 569 WWIRGLCTFASVCDKVLT-DDLASSWFQSLINLFNFT--GNQNYRIAFEALKIAVISNPSL-RKTICSQLWNLHYQAESAKKDG--KFDEEYNKKLVQL 661
                 **************9998.************987766..6778889***********9976.7889999*******98888887..5666677779999 PP

      Gcn1_N 299 lkaiclsp..aeklgkdvdeevlekqlvellVlarheliprssWIdlclragvDPgkLvre 357
                 lk+i l+     ++ +++   + +  l+ell l+   ++ + +WI+lc+ ++ DP +Lv+e
  EPX70624.1 662 LKSILLAIsaDVSTVDSTRFVDYDFYLIELLFLSF-AYVDQFNWIQLCQLSHRDPATLVTE 721
                 9999995443222334444455667899***9996.579999*****************98 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 1.2
      Gcn1_N  231 ylivsssvspevRrealealsklyaanpelvskviie 267 
                  y++ + ++ + vR +a ++ ++++++ p +v ++i+ 
  EPX70624.1 1870 YILRQ-DIAAAVRTNAQQIWKNIVVNTPRTVRDIITT 1905
                  55544.49999*********************99975 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 1
      Gcn1_N  244 realealsklyaanpelvskviieal.wswlesleeaekdsaavlaktenen.Lslvlkaiclsp.aeklgkdvdeevlekqlvell 327 
                  ++al+al++++a+++ ++  v+i  l ++ +++++++   s a +a++  ++ L ++l+a+++s  + k  +dv +++  ++ v+++
  EPX70624.1 2039 EHALSALKEIIARRSTSIFPVLIPTLiKQPITAFNARALASLAQAAGSTLNRrLPSILNALMESIlVAK--DDVLQSL--EESVDTI 2121
                  679999999999997777777776651455666666667776666666555457777777777433222..2333322..2334444 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 0.68
      Gcn1_N  239 spevRrealealsklyaanpelvskviiealwswleslee 278 
                  ++ vR++ l+al ++++++ ++++++  +++ + l+++++
  EPX70624.1 2376 DAGVRKAMLNALFAVVSKSGQNMNEASADSVDQLLKEISS 2415
                  4456777777777777777777777777777776666633 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0         4   5.5e+03      33      73 ..      60     104 ..      45     111 .. 0.72
   2 ?   -1.4   0.0       2.3   3.1e+03      33      56 ..    1065    1088 ..    1028    1117 .. 0.64
   3 ?    5.1   0.0     0.022        30      32      80 ..    1321    1375 ..    1286    1383 .. 0.73
   4 ?    6.0   0.0     0.011        16      24      87 ..    1382    1464 ..    1360    1465 .. 0.61
   5 !   23.8   0.0   3.2e-08   4.4e-05       1      76 [.    1480    1571 ..    1480    1580 .. 0.80
   6 !   19.7   0.0   5.9e-07   0.00081      32      87 ..    1639    1701 ..    1605    1702 .. 0.83
   7 !   20.2   0.0   4.1e-07   0.00057       4      58 ..    1643    1704 ..    1636    1740 .. 0.51
   8 ?    5.3   0.1     0.019        27      31      84 ..    1756    1815 ..    1716    1819 .. 0.66
   9 ?    4.0   0.1     0.049        67       2      56 ..    1759    1819 ..    1758    1848 .. 0.74
  10 ?   -0.5   0.1       1.2   1.6e+03      48      83 ..    1850    1884 ..    1796    1887 .. 0.52
  11 !   15.6   0.0   1.1e-05     0.015      15      86 ..    1920    2008 ..    1909    2010 .. 0.77
  12 !   12.3   1.1   0.00012      0.17       1      79 [.    2025    2111 ..    2025    2118 .. 0.82
  13 ?    2.1   0.0      0.19   2.6e+02       6      57 ..    2140    2200 ..    2134    2216 .. 0.66
  14 !   14.7   0.1   2.2e-05      0.03       6      71 ..    2333    2410 ..    2329    2421 .. 0.62

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 4
      HEAT_2  33 lpaLvell.ededpavRraaaeaLgaig...dpealpaLkelldd 73 
                 ++ + e+l ++ +++ R + + +L+ i     + al aL+++l++
  EPX70624.1  60 IDNIMEVLpRNVSRECRLELCATLAHITklsPSIALTALLHRLQS 104
                 667777777777888999999999877533134488888888775 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 2.3
      HEAT_2   33 lpaLvellededpavRraaaeaLg 56  
                  l++L+e   + ++ vR a+ ++L 
  EPX70624.1 1065 LKLLLEHTCHNETSVRSAVLQSLQ 1088
                  444555555555677777777764 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.022
      HEAT_2   32 alpaLvellededpavRraaaeaLgai......gdpealpaLkellddddddvvR 80  
                  +l+ L+++l+++++ v+ a+a  ++ +      ++++ +++L  +l++ ++   R
  EPX70624.1 1321 VLENLISALSTPSESVQLAVASCISPLikkllpKSKQYYDHLVSSLLNASSFAER 1375
                  58999****************9998333333446788889999988887774444 PP

  == domain 4  score: 6.0 bits;  conditional E-value: 0.011
      HEAT_2   24 Lg.........rignpealpaLvelled.edpavRraaaeaLgai....g......dpealpaLkellddddddvvReaAaeaL 87  
                  L+          +++  +++ L+e +++ +++ +R+ a     a+    g      +p+ lp+L+ ++  d+ ++vRea++ea+
  EPX70624.1 1382 LAglikglgikAFKDFNIMDQLHESMTNrQSSSIRQGALFCVEAFsrtlGiyfepyLPDLLPLLLSSFG-DSASEVREATLEAV 1464
                  554444333545555577888888885437788888888766655333314343446889999999884.67788888888876 PP

  == domain 5  score: 23.8 bits;  conditional E-value: 3.2e-08
      HEAT_2    1 ldaLlqalendpdpevrraairaLg..........rignpealpaLvellededpavRraaaeaLgaigd.......pealpaLkellddddd 76  
                  l+ Ll  l nd ++  +ra ++ Lg          +   p+++p L+e+l+d+++ vR +a ++L ++g+       +  +p+L+++l d + 
  EPX70624.1 1480 LPSLLDGL-NDYNWRSKRASVEILGlmsymapkqlSVSLPTIVPKLTEVLTDSHSQVRNTANNSLLRFGEvisnpeiQNLVPVLLKALSDCTR 1571
                  6899****.****************99865555444445599***********************9999444453445588999999987664 PP

  == domain 6  score: 19.7 bits;  conditional E-value: 5.9e-07
      HEAT_2   32 alpaLvellededpavRraaaeaLg....aigd...pealpaLkellddddddvvReaAaeaL 87  
                  ++p L+e+l d+ p++R++aa+aLg    ++g+   p  +p L   l+++ ++v R+ Aa++L
  EPX70624.1 1639 LMPRLREVLIDPVPDTRATAAKALGslmeKLGEtkfPTLIPELFNVLRSECSEVDRQGAAQGL 1701
                  5899********************955555565677999*********************998 PP

  == domain 7  score: 20.2 bits;  conditional E-value: 4.1e-07
      HEAT_2    4 LlqalendpdpevrraairaLg.......rignpealpaLvellededpav.RraaaeaLgai 58  
                  L ++l  dp p++r++a++aLg       + + p+++p L+++l++e ++v R+ aa+ L+++
  EPX70624.1 1643 LREVL-IDPVPDTRATAAKALGslmeklgETKFPTLIPELFNVLRSECSEVdRQGAAQGLSEV 1704
                  23333.266666666666666655554444444466666666666665444356666666555 PP

  == domain 8  score: 5.3 bits;  conditional E-value: 0.019
      HEAT_2   31 ealpaLvellededpavRraaaeaLgai.......gdpealpaLkellddddddvvReaAa 84  
                  +a+p ++  l de++ v+ a  +a+  i       + +  lp L++ l  dd++++R +++
  EPX70624.1 1756 RAIPPILAGLADESELVQTASLRAAKMIvnnyatrAVDLLLPELEKGL-FDDSWRIRLSSV 1815
                  788888888888888888888888876544332211233566667766.444555565555 PP

  == domain 9  score: 4.0 bits;  conditional E-value: 0.049
      HEAT_2    2 daLlqalendpdpevrraairaLg....rignpea...lpaLvellededpavRraaaeaLg 56  
                  ++ l+ l  d+++ v+ a +ra      +++++ +   lp L + l d+++++R   ++  g
  EPX70624.1 1759 PPILAGL-ADESELVQTASLRAAKmivnNYATRAVdllLPELEKGLFDDSWRIRLSSVQLVG 1819
                  6677778.788888888888888844443344333666888888888888999888777666 PP

  == domain 10  score: -0.5 bits;  conditional E-value: 1.2
      HEAT_2   48 RraaaeaLgaigdpealpaLkellddddddvvReaA 83  
                  R+a  e++g  +++++l++L   l++d  + vR+ A
  EPX70624.1 1850 RKALLETIGSERHDRVLASLYI-LRQDIAAAVRTNA 1884
                  3333345555555555555553.3444555555544 PP

  == domain 11  score: 15.6 bits;  conditional E-value: 1.1e-05
      HEAT_2   15 evrraairaLgrignp.......ealpaLvellededpavRraaaeaLgai...........gdpealpaLkellddddddvvReaAaea 86  
                  + r++ +++Lg++  +       ++lp L + le++d++ R  ++ aL ++            +++++ + +e+l  d+d +vReaAaea
  EPX70624.1 1920 DRRAMCVKSLGDLSKKagfdvlsQLLPSLKDGLESSDRENRIGVCIALQELisstsqdqleiYSDQFVYSVREAL-MDSDLEVREAAAEA 2008
                  45778889999776665666666779999999999*************955444443322226899*******98.789999******98 PP

  == domain 12  score: 12.3 bits;  conditional E-value: 0.00012
      HEAT_2    1 ldaLlqalendpdpevrraairaLgrignpealpaLvell.ededpavRraaaeaLgaig.......dpealpaLkellddddddvv 79  
                  l+ Ll++le+d   e +  a++++   ++++++p L++ l + + +a  + a  +L++ +       +p+ l+aL e+ +  +ddv 
  EPX70624.1 2025 LPELLKLLESDDKSEHALSALKEIIARRSTSIFPVLIPTLiKQPITAFNARALASLAQAAgstlnrrLPSILNALMESILVAKDDVL 2111
                  689***********************************777***************9774344333357788888887777766664 PP

  == domain 13  score: 2.1 bits;  conditional E-value: 0.19
      HEAT_2    6 qalendpdpevrraai.raLgrignp.........ealpaLvellededpavRraaaeaLga 57  
                  ++  + +d++ r  a+ + L  ++n          + +  Lv+l ed +++v +aa+ a  a
  EPX70624.1 2140 SFT-ENEDYKKRLFAAkHMLTFFQNSkldyfrfvpDWISHLVRLFEDRSSEVIAAAVAAQNA 2200
                  555.5677777775553555555555344444444669999999999999999999987555 PP

  == domain 14  score: 14.7 bits;  conditional E-value: 2.2e-05
      HEAT_2    6 qalendpdpev.rraairaLg.....rignpealpaLvellededpavRraaaeaLgai....g...dpealpaLkell 71  
                  + l  dp+ ev r +a+ aLg     + +   ++  Lv+ ++++d+ vR+a  +aL a+    g   +++++++  +ll
  EPX70624.1 2333 KSL-GDPSSEViRSRAATALGtlitlQTRLAPIVTELVSGARTPDAGVRKAMLNALFAVvsksGqnmNEASADSVDQLL 2410
                  556.7888887588*******5553333333457777777799*************54433223222233333333333 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.1     0.051        71      95     135 ..      36      73 ..      25      91 .. 0.82
   2 !   11.9   2.2   0.00013      0.18      59     160 ..     321     422 ..     314     430 .. 0.84
   3 ?    0.4   0.0      0.44   6.1e+02      23      68 ..    1322    1367 ..    1313    1373 .. 0.87
   4 ?    0.2   0.0      0.51     7e+02      38     126 ..    1375    1474 ..    1357    1477 .. 0.68
   5 ?    1.0   0.0      0.27   3.8e+02      22     103 ..    1441    1523 ..    1428    1525 .. 0.71
   6 !    9.8   0.1   0.00055      0.75      22     130 ..    1520    1630 ..    1512    1635 .. 0.64
   7 !    6.9   0.0    0.0045       6.1      59     116 ..    1639    1694 ..    1604    1708 .. 0.74
   8 !    7.0   0.0    0.0041       5.6      20     116 ..    1637    1694 ..    1630    1746 .. 0.57
   9 ?    4.6   0.0     0.022        31      14      85 ..    1749    1821 ..    1737    1838 .. 0.68
  10 !    6.0   0.0    0.0082        11      22     137 ..    1865    1981 ..    1859    1984 .. 0.80
  11 !    9.5   0.2    0.0007      0.97      20      98 ..    1984    2061 ..    1978    2104 .. 0.78
  12 ?    2.4   0.0       0.1   1.4e+02      59     103 ..    2175    2219 ..    2133    2235 .. 0.81
  13 !    7.0   0.1     0.004       5.5      30     114 ..    2335    2416 ..    2300    2532 .. 0.62

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.051
        Cnd1  95 nllpdiisklsdalnecsewgqitilefLlsyipkdkqeae 135
                 +++ di+ +++ ++n+++e++ ++i++ +++  p++ +   
  EPX70624.1  36 KVMLDILRHVN-QINDIDEKTIVVIIDNIMEVLPRNVS--R 73 
                 56789999999.89*******************99877..3 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 0.00013
        Cnd1  59 flselaklleDenprVvanalaalteisek..senaiynllpdiisklsdalnecsewgqitilefLlsyipkdkqeaeslveklcprlqhansavvla 155
                 + +++a+ l+ +n++V++n+ + ++ + +   +++ ++++  ++ s l++  +  s+++++  +e+L++   k+     sl++ + p + +++++   +
  EPX70624.1 321 LYDTFASNLKSSNATVRQNCFHTFSVLCKHakDSKVLMEVALKLTSALKT-NKVTSNEHRNLYMECLSHLSVKEID-STSLLKEVLPLFMKVQESSFYH 417
                 56889999*******************99976778889999999999994.577999999999****999999988.99******99999998888544 PP

        Cnd1 156 aikvi 160
                   +vi
  EPX70624.1 418 LAAVI 422
                 44444 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.44
        Cnd1   23 vepLrkrLkDedpyVRktaaivvakLilndmvkekgflselaklle 68  
                  +e+L ++L+ +++ V+   a +++ Li++ + k+k+  ++l + l 
  EPX70624.1 1322 LENLISALSTPSESVQLAVASCISPLIKKLLPKSKQYYDHLVSSLL 1367
                  67888999999999*************9999999999999988775 PP

  == domain 4  score: 0.2 bits;  conditional E-value: 0.51
        Cnd1   38 RktaaivvakL...ilndmvkekgflselakll.eDenprVvanalaalteiseksenaiynllpdiisklsd.......alnecsewgqitilefL 123 
                  Rk +a+++a L   +  + +k+ +++++l + + + +++++++ al++ +  s+  +  +   lpd++  l++       +  e++ ++ ++i++ L
  EPX70624.1 1375 RKGTAYGLAGLikgLGIKAFKDFNIMDQLHESMtNRQSSSIRQGALFCVEAFSRTLGIYFEPYLPDLLPLLLSsfgdsasEVREATLEAVKHIMSQL 1471
                  7888888888855555667788888888887664667788888888888888888555555666666666666444444444456666666666666 PP

        Cnd1  124 lsy 126 
                  + y
  EPX70624.1 1472 SAY 1474
                  655 PP

  == domain 5  score: 1.0 bits;  conditional E-value: 0.27
        Cnd1   22 lvepLrkrLkDedpyVRktaaivvakLiln.dmvkekgflselaklleDenprVvanalaalteiseksenaiynllpdiisk 103 
                  l++ L +++ D+ + VR+ ++ +v +++++     +k +l  l++ l+D n r    ++ +l  +s ++++++  +lp+i+ k
  EPX70624.1 1441 LLPLLLSSFGDSASEVREATLEAVKHIMSQlSAYGVKLLLPSLLDGLNDYNWRSKRASVEILGLMSYMAPKQLSVSLPTIVPK 1523
                  55566777888888999999999999855514677777888888888888877777777777777777666666666666655 PP

  == domain 6  score: 9.8 bits;  conditional E-value: 0.00055
        Cnd1   22 lvepLrkrLkDedpyVRktaaivvakL...ilndmvkekg..flselaklleDenprVvanalaalteiseksenaiynllpdiisklsdalnecse 113 
                  +v++L++ L+D++++VR+ta   +++    i+n  +++    +l+ l ++ + +++  +a  ++a+  +++      + l++ ii++   + n  ++
  EPX70624.1 1520 IVPKLTEVLTDSHSQVRNTANNSLLRFgevISNPEIQNLVpvLLKALSDCTRYTDDALSAILKTAFVHYLDSP---SLALVIPIIQYGMRERNASTK 1613
                  5667777777777777777777777777765555444433357777777777777777777777777777664...355556666666666666666 PP

        Cnd1  114 wgqitilefLlsyipkd 130 
                   +  +i+ +++s ++++
  EPX70624.1 1614 RQSAKIFGLMASLTEPE 1630
                  66666666666666655 PP

  == domain 7  score: 6.9 bits;  conditional E-value: 0.0045
        Cnd1   59 flselaklleDenprVvanalaalteisek.senaiynllpdiisklsdalnecsewgq 116 
                  ++ +l++ l D+ p  +a a  al  + ek +e+++ +l p++++ l +   ecse ++
  EPX70624.1 1639 LMPRLREVLIDPVPDTRATAAKALGSLMEKlGETKFPTLIPELFNVLRS---ECSEVDR 1694
                  6677888888888888888888888888887778888888888888873...5666555 PP

  == domain 8  score: 7.0 bits;  conditional E-value: 0.0041
        Cnd1   20 eylvepLrkrLkDedpyVRktaaivvakLilndmvkekgflselaklleDenprVvanalaalteisek.senaiynllpdiisklsdalnecsewg 115 
                  ++l+++Lr+ L D+ p  R taa ++  L                                      ek +e+++ +l p++++ l +   ecse +
  EPX70624.1 1637 DPLMPRLREVLIDPVPDTRATAAKALGSL-------------------------------------MEKlGETKFPTLIPELFNVLRS---ECSEVD 1693
                  55555555555555555555555555555.....................................5554444445555555555442...333333 PP

        Cnd1  116 q 116 
                  +
  EPX70624.1 1694 R 1694
                  3 PP

  == domain 9  score: 4.6 bits;  conditional E-value: 0.022
        Cnd1   14 rvpnlveylvepLrkrLkDedpyVRktaaivvakLilnd.mvkekg.flselaklleDenprVvanalaaltei 85  
                  r++  +   ++p+ ++L De++ V+ ta +  ak+i n+   +  + +l el+k l D++ r++ +++ +  ++
  EPX70624.1 1749 RFQPYLARAIPPILAGLADESELVQ-TASLRAAKMIVNNyATRAVDlLLPELEKGLFDDSWRIRLSSVQLVGDL 1821
                  5666666777888888888888885.555666666444414444446888888888888887777766665554 PP

  == domain 10  score: 6.0 bits;  conditional E-value: 0.0082
        Cnd1   22 lvepLrkrLkDedpyVRktaaivvakLilndmvkekgflselakll....eDenprVvanalaalteiseksenaiynllpdiisklsdalnecsew 114 
                  ++  L+   +D  + VR +a  +  +++ n+   +++++ +l +l+    +   +  +a+++ +l ++s+k+    + +l++++ +l+d l++ +++
  EPX70624.1 1865 VLASLYILRQDIAAAVRTNAQQIWKNIVVNTPRTVRDIITTLTSLIignlNSAGNDRRAMCVKSLGDLSKKA---GFDVLSQLLPSLKDGLESSDRE 1958
                  566788888999999************999999999999999999863323344555677777777777765...6889999999999999999999 PP

        Cnd1  115 gqitilefLlsyipkdkqeaesl 137 
                  ++i ++ +L + i++++q++ ++
  EPX70624.1 1959 NRIGVCIALQELISSTSQDQLEI 1981
                  99999999999999999977666 PP

  == domain 11  score: 9.5 bits;  conditional E-value: 0.0007
        Cnd1   20 eylvepLrkrLkDedpyVRktaaivvakL.ilndmvkekgflselaklleDenprVvanalaalteiseksenaiynllp 98  
                  +++v  +r++L D+d  VR+ aa ++  L    +   + ++l el+klle +++  ++ al+al+ei  + ++ i+ +l+
  EPX70624.1 1984 DQFVYSVREALMDSDLEVREAAAEAFDTLqTVIGDRAVDEVLPELLKLLESDDK--SEHALSALKEIIARRSTSIFPVLI 2061
                  677888999999999999999999999998555556667789999999966666..589999999999996666655443 PP

  == domain 12  score: 2.4 bits;  conditional E-value: 0.1
        Cnd1   59 flselaklleDenprVvanalaalteiseksenaiynllpdiisk 103 
                   +s+l +l eD +++V+a a+aa + + +   +  +++++++ +k
  EPX70624.1 2175 WISHLVRLFEDRSSEVIAAAVAAQNALTSSMRKDRIESVISVTYK 2219
                  689999****************99999988444444444444444 PP

  == domain 13  score: 7.0 bits;  conditional E-value: 0.004
        Cnd1   30 LkDedpyV.RktaaivvakLilndmvkekgflselaklleDenprVvanalaalteiseksenaiynllpdiisklsdalnecsew 114 
                  L D+++ V R  aa ++  Li+ ++ +   ++ el +  + +++ V++  l+al  + +ks++++ +   d++ +l+++   +s +
  EPX70624.1 2335 LGDPSSEViRSRAATALGTLITLQT-RLAPIVTELVSGARTPDAGVRKAMLNALFAVVSKSGQNMNEASADSVDQLLKE---ISSE 2416
                  5555443326666666666654443.23445666666666666666666666666666665555555555555555532...2222 PP

>> CLASP_N  CLASP N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1      0.93   1.3e+03     101     204 ..      78     178 ..      74     188 .. 0.67
   2 ?    4.4   0.3     0.017        23      90     136 ..     316     361 ..     299     410 .. 0.72
   3 ?    0.6   0.0      0.24   3.4e+02      37      70 ..     648     681 ..     645     694 .. 0.88
   4 ?   -3.0   0.1       3.1   4.3e+03      33      96 ..    1305    1367 ..    1288    1369 .. 0.73
   5 !   27.4   0.0   1.6e-09   2.2e-06      67     206 ..    1412    1549 ..    1391    1553 .. 0.86
   6 !    5.2   0.0    0.0099        14      92     200 ..    1555    1662 ..    1550    1675 .. 0.76
   7 ?    0.3   0.0      0.31   4.2e+02      54     162 ..    1716    1826 ..    1706    1856 .. 0.77
   8 !    8.0   0.0    0.0014         2     146     211 ..    1959    2020 ..    1875    2033 .. 0.81
   9 ?    1.4   0.1      0.14   1.9e+02      77     162 ..    2077    2165 ..    2068    2194 .. 0.82
  10 ?   -0.3   0.0      0.48   6.7e+02      88     180 ..    2320    2409 ..    2303    2446 .. 0.69

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.93
     CLASP_N 101 kllgdtKkiisqnanqalaallsnas.fsprilqvlsvalqdKnvqpReysaiwLkilltrfeshkskleasllldliekslkkgleDanpt.VRetaR 197
                 +l++   +i+  + ++al+all  ++ +s+r+ +v s+a++         ++ w++ +l++ +s+++k    + l l  + l +++ Da+p+ VR++  
  EPX70624.1  78 ELCATLAHITKLSPSIALTALLHRLQsISNRLERVPSSAIS-----VSFNALSWVNCILSNLPSNEMKYWMLEFLPLQSQFLNAVIRDAKPAiVRSALQ 171
                 56666666666666666666666665445555444444442.....23446788888999998888888888888888999999999999985687776 PP

     CLASP_N 198 stfweff 204
                 +t  ++ 
  EPX70624.1 172 NTRRCYR 178
                 6666655 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.017
     CLASP_N  90 pmveillptLlkllgdtKkiisqnanqalaallsnasfspri.lqvls 136
                  ++ +l++t+   l +    ++qn +++++ l+++a+  +++ + v  
  EPX70624.1 316 LLLSRLYDTFASNLKSSNATVRQNCFHTFSVLCKHAK-DSKVlMEV-A 361
                 4588999******************************.88874444.3 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.24
     CLASP_N  37 gnvpedaveelleclkqlleailkalssLrttls 70 
                 g+  e++ ++l+++lk++l ai+  +s + +t +
  EPX70624.1 648 GKFDEEYNKKLVQLLKSILLAISADVSTVDSTRF 681
                 667899*******************999988865 PP

  == domain 4  score: -3.0 bits;  conditional E-value: 3.1
     CLASP_N   33 slikgnvpedaveelleclkqlleailkalssLrttlsstgchllkelaiqlkeqldpmveill 96  
                    ++++  +++ + l+ +l +l+ a+++   s+  ++ s    l+k+l+   k+  d++v +ll
  EPX70624.1 1305 GTVAQH-LQENDQRLVVVLENLISALSTPSESVQLAVASCISPLIKKLLPKSKQYYDHLVSSLL 1367
                  455565.677888888999999999999999999999999999999988888888887777665 PP

  == domain 5  score: 27.4 bits;  conditional E-value: 1.6e-09
     CLASP_N   67 ttlsstgchl.lkelaiqlkeqldpmveillptLlkllgdtKkiisqnanqalaallsnas.fspri.lqvlsvalqdKnvqpReysaiwLkilltr 160 
                  ++ + +g ++ ++ ++++l+  ++p++  llp+Ll   gd    +++++  a++ ++s++s +  ++ l  l  +l+d n + +  s++ L ++   
  EPX70624.1 1412 SSSIRQGALFcVEAFSRTLGIYFEPYLPDLLPLLLSSFGDSASEVREATLEAVKHIMSQLSaYGVKLlLPSLLDGLNDYNWRSKRASVEILGLMSYM 1508
                  4444444444267788899999**************************************98999999***************************** PP

     CLASP_N  161 feshkskleasllldliekslkkgleDanptVRetaRstfweffkv 206 
                   +   ++l+ sl   +i++ l+++l+D+ ++VR+ta + + +f +v
  EPX70624.1 1509 AP---KQLSVSL--PTIVPKLTEVLTDSHSQVRNTANNSLLRFGEV 1549
                  **...7777777..88********************9999998776 PP

  == domain 6  score: 5.2 bits;  conditional E-value: 0.0099
     CLASP_N   92 veillptLlkllgdtKkiisqnanqalaallsnasfspri...lqvlsvalqdKnvqpReysaiwLkilltrfeshkskleaslll.dliekslkkg 184 
                  +++l+p+Llk l+d    +  + +++l++ + +   sp +   + +++ ++ ++n++++  sa+   ++ +  e      e+ +++ d +++ l+++
  EPX70624.1 1555 IQNLVPVLLKALSDCTRYTDDALSAILKTAFVHYLDSPSLalvIPIIQYGMRERNASTKRQSAKIFGLMASLTE-----PENLAIYlDPLMPRLREV 1646
                  66778888888888888877777777766665544333332147899*******************99999988.....3444433499******** PP

     CLASP_N  185 leDanptVRetaRstf 200 
                  l D+ p  R ta +++
  EPX70624.1 1647 LIDPVPDTRATAAKAL 1662
                  *********9987765 PP

  == domain 7  score: 0.3 bits;  conditional E-value: 0.31
     CLASP_N   54 lleailkalssLrttlsstgchllkelaiqlkeqldpmveillptLlkllgdtKkiisqnanqalaallsnas.fspri.lqvlsvalqdKnvqpRe 148 
                  +l  il+++ss    +    ++ll  l  +++ +++p++ + +p +l  l+d  +++ +++  a + +++n      ++ l  l+ +l d + ++R+
  EPX70624.1 1716 VLPEILQNTSSPTAYIRESFISLLIYLPATFGARFQPYLARAIPPILAGLADESELVQTASLRAAKMIVNNYAtRAVDLlLPELEKGLFDDSWRIRL 1812
                  55667777777777777888999999999*********999999999999*******9999999999999877233444556666666777777777 PP

     CLASP_N  149 ysaiwLkilltrfe 162 
                   s++++  l+ + +
  EPX70624.1 1813 SSVQLVGDLIYKLA 1826
                  77776666666655 PP

  == domain 8  score: 8.0 bits;  conditional E-value: 0.0014
     CLASP_N  146 pReysaiwLkilltrfeshkskleasllldliekslkkgleDanptVRetaRstfweffkvwPsrA 211 
                   R+ ++i L+ l+++ +  + +le  +  d+++ s++++l D++ +VRe+a ++f ++  v  +rA
  EPX70624.1 1959 NRIGVCIALQELISSTS--QDQLEIYS--DQFVYSVREALMDSDLEVREAAAEAFDTLQTVIGDRA 2020
                  56777788888888887..55555555..8899**********************99998888877 PP

  == domain 9  score: 1.4 bits;  conditional E-value: 0.14
     CLASP_N   77 lkelaiqlkeqldpmveillptLlkllgdtKkiisqnanqalaallsnasfspr..i.lqvlsvalqdKnvqpReysaiwLkilltrfe 162 
                  l  la+  ++ l   + ++l+ L++ +   K+ + q+ + ++++++ +++ ++   + + +l + +++  ++ R+++a+++ +++++++
  EPX70624.1 2077 LASLAQAAGSTLNRRLPSILNALMESILVAKDDVLQSLEESVDTIVLSIKDQEGlaVlMAHLYSFTENEDYKKRLFAAKHMLTFFQNSK 2165
                  7789999999999999******************************9999444333458888999999999*************99987 PP

  == domain 10  score: -0.3 bits;  conditional E-value: 0.48
     CLASP_N   88 ldpmveillptLlkllgd.tKkiisqnanqalaallsnasfsprilqvlsvalqdKnvqpReysaiwLkilltrfeshkskleasllldlieks 180 
                  l p++ +l  t+ k lgd   ++i++ a++al +l++  +    i++ l +++    +  R  +++ L  ++++++++ ++++a     +++++
  EPX70624.1 2320 LRPFLPQLQRTFAKSLGDpSSEVIRSRAATALGTLITLQTRLAPIVTELVSGARTPDAGVRKAMLNALFAVVSKSGQNMNEASAD----SVDQL 2409
                  6677777888888888883468999999999999998777334444444444444445568888888888888888444444443....34444 PP

>> Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.0    0.0008       1.1       3      59 ..    1416    1472 ..    1414    1489 .. 0.87
   2 !    7.0   0.0    0.0065         9      23      89 ..    1474    1540 ..    1460    1546 .. 0.84
   3 ?    5.9   0.0     0.014        19      19      67 ..    1511    1559 ..    1493    1576 .. 0.77
   4 ?   -1.5   0.0       2.9     4e+03      21      82 ..    1632    1694 ..    1617    1705 .. 0.77
   5 ?   -1.9   0.0       3.9   5.3e+03      19      43 ..    1748    1772 ..    1739    1811 .. 0.82
   6 !    7.6   0.0     0.004       5.6       2      64 ..    1959    2022 ..    1940    2041 .. 0.79
   7 !    8.3   0.1    0.0025       3.5      15      93 ..    2121    2199 ..    2111    2203 .. 0.87
   8 ?   -0.3   0.0       1.2   1.6e+03      12      69 ..    2348    2405 ..    2343    2420 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.0008
  Vac14_Fab1_bd    3 rkggligLaavaialekkikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvak 59  
                     r+g+l  + a + +l+   ++yl ++++ +l++f D+ s+vR  + E++  i+ ++ 
     EPX70624.1 1416 RQGALFCVEAFSRTLGIYFEPYLPDLLPLLLSSFGDSASEVREATLEAVKHIMSQLS 1472
                     99****************************************999999887776655 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0065
  Vac14_Fab1_bd   23 eyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalvklvaDsdesvksgae 89  
                       ++ +++++l+ ++D + r +  ++E l  ++ +a +++   l +i   l+++++Ds+++v+++a+
     EPX70624.1 1474 YGVKLLLPSLLDGLNDYNWRSKRASVEILGLMSYMAPKQLSVSLPTIVPKLTEVLTDSHSQVRNTAN 1540
                     4567788999999999999999999999999999999999999999999999999999999999885 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.014
  Vac14_Fab1_bd   19 kkikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlklln 67  
                     k+++  l +iv+ + ++++D+ s+vR +a  sl     v+ +  +++l 
     EPX70624.1 1511 KQLSVSLPTIVPKLTEVLTDSHSQVRNTANNSLLRFGEVISNPEIQNLV 1559
                     567778899************************9988888776666554 PP

  == domain 4  score: -1.5 bits;  conditional E-value: 2.9
  Vac14_Fab1_bd   21 ikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlk.llneifdalvklvaDsde 82  
                     ++ yl+ +++ + +++ D    +R +a+ +l  ++ ++ ++ +  l+ e+f++l + ++++d+
     EPX70624.1 1632 LAIYLDPLMPRLREVLIDPVPDTRATAAKALGSLMEKLGETKFPtLIPELFNVLRSECSEVDR 1694
                     6778888999999999999999999999999988766666555427899**999998888875 PP

  == domain 5  score: -1.9 bits;  conditional E-value: 3.9
  Vac14_Fab1_bd   19 kkikeyleeivkpvlkcfsDkdsrv 43  
                     ++ ++yl + ++p+l+ + D+++ v
     EPX70624.1 1748 ARFQPYLARAIPPILAGLADESELV 1772
                     5678899999999999999998876 PP

  == domain 6  score: 7.6 bits;  conditional E-value: 0.004
  Vac14_Fab1_bd    2 arkggligLaavaialekk.ikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlk 64  
                     +r g  i+L  +  + +++ ++ y +++v +v +++ D+d +vR  a+E++  +  v+ ++++ 
     EPX70624.1 1959 NRIGVCIALQELISSTSQDqLEIYSDQFVYSVREALMDSDLEVREAAAEAFDTLQTVIGDRAVD 2022
                     57777788876555555545999999******************99999988887777776664 PP

  == domain 7  score: 8.3 bits;  conditional E-value: 0.0025
  Vac14_Fab1_bd   15 ialekkikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalvklvaDsdesvksgaelldr 93  
                     i l+ k +e l  +++ + +  + +d + R +a+  +    + +k + ++++ +  + lv+l+ D  ++v  +a   ++
     EPX70624.1 2121 IVLSIKDQEGLAVLMAHLYSFTENEDYKKRLFAAKHMLTFFQNSKLDYFRFVPDWISHLVRLFEDRSSEVIAAAVAAQN 2199
                     5566666677778888888899999*********************************************998876655 PP

  == domain 8  score: -0.3 bits;  conditional E-value: 1.2
  Vac14_Fab1_bd   12 avaialekkikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllnei 69  
                     a+a++   ++++ l  iv+ +++  +  d+ vR     +l+ ++ ++ +++ +   + 
     EPX70624.1 2348 ATALGTLITLQTRLAPIVTELVSGARTPDAGVRKAMLNALFAVVSKSGQNMNEASADS 2405
                     4555555557788888999999999999999999999999999888777765554444 PP

>> Cohesin_HEAT  HEAT repeat associated with sister chromatid cohesion
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.68   9.4e+02      30      41 ..    1075    1086 ..    1066    1087 .. 0.87
   2 !    7.7   0.0    0.0032       4.4      17      42 .]    1439    1464 ..    1437    1464 .. 0.88
   3 ?    4.3   0.0     0.038        52      17      39 ..    1518    1540 ..    1515    1543 .. 0.76
   4 ?    4.0   0.1     0.047        65      22      38 ..    1989    2005 ..    1982    2007 .. 0.84
   5 ?   -0.1   0.0      0.91   1.2e+03      16      34 ..    2324    2342 ..    2308    2342 .. 0.73
   6 ?    0.6   0.0      0.55   7.6e+02       3      41 ..    2351    2386 ..    2349    2387 .. 0.78

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.68
                    S-HHHHHHHHHH CS
  Cohesin_HEAT   30 sspsVRdAaLel 41  
                    +++sVR A+L+ 
    EPX70624.1 1075 NETSVRSAVLQS 1086
                    579*******96 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.0032
                    HHHHHHHHHHHHSS-HHHHHHHHHHH CS
  Cohesin_HEAT   17 pevldtiarrltDsspsVRdAaLell 42  
                    p++l  + + + Ds++ VR+A+Le +
    EPX70624.1 1439 PDLLPLLLSSFGDSASEVREATLEAV 1464
                    788888999999***********976 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.038
                    HHHHHHHHHHHHSS-HHHHHHHH CS
  Cohesin_HEAT   17 pevldtiarrltDsspsVRdAaL 39  
                    p +   + + ltDs ++VR++a 
    EPX70624.1 1518 PTIVPKLTEVLTDSHSQVRNTAN 1540
                    55556666779*********996 PP

  == domain 4  score: 4.0 bits;  conditional E-value: 0.047
                    HHHHHHHSS-HHHHHHH CS
  Cohesin_HEAT   22 tiarrltDsspsVRdAa 38  
                    ++ + l Ds+  VR+Aa
    EPX70624.1 1989 SVREALMDSDLEVREAA 2005
                    56688***********8 PP

  == domain 5  score: -0.1 bits;  conditional E-value: 0.91
                    SHHHHHHHHHHHHSS-HHH CS
  Cohesin_HEAT   16 apevldtiarrltDsspsV 34  
                     p+++ t+a+ l D+s+ V
    EPX70624.1 2324 LPQLQRTFAKSLGDPSSEV 2342
                    3699************977 PP

  == domain 6  score: 0.6 bits;  conditional E-value: 0.55
                    HHHHHHH-GGGGGSHHHHHHHHHHHHSS-HHHHHHHHHH CS
  Cohesin_HEAT    3 lsslvekdpsiLsapevldtiarrltDsspsVRdAaLel 41  
                    l+ l++     + ap+v + ++  ++ +++ VR+A+L  
    EPX70624.1 2351 LGTLITLQ--TRLAPIVTELVSG-ARTPDAGVRKAMLNA 2386
                    66666777..4448999999999.8889********986 PP

>> ParcG  Parkin co-regulated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.1         8   1.1e+04      73     119 ..     238     280 ..     229     291 .. 0.74
   2 ?   -1.9   0.0       2.3   3.2e+03      29      67 ..     525     563 ..     504     568 .. 0.79
   3 ?   -2.3   0.1         3   4.1e+03      64     113 ..    1309    1357 ..    1300    1371 .. 0.56
   4 ?    1.6   0.1       0.2   2.7e+02      36     126 ..    1476    1566 ..    1453    1588 .. 0.71
   5 ?    3.3   0.0     0.056        77      36     101 ..    1636    1701 ..    1623    1712 .. 0.85
   6 ?   -1.2   0.0       1.4   1.9e+03      50     109 ..    1724    1785 ..    1715    1795 .. 0.74
   7 !    9.6   0.0   0.00068      0.94      37     118 ..    1942    2020 ..    1934    2056 .. 0.85
   8 ?    4.5   0.0     0.025        35      38     129 ..    2242    2331 ..    2236    2360 .. 0.74

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 8
       ParcG  73 kilpvlpklilplkeaLntrdeeviesaLkvlqklvkaseligeaLv 119
                  +++++p+ +l  k  L + + e ++ ++ +l  l    +  +++L 
  EPX70624.1 238 FLVKMIPQHVLTAKPLLPKLSVEGFCYSVGLLLSL----DKLSSNLL 280
                 578999****9999999999999999998888777....44444444 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 2.3
       ParcG  29 veiekLdydalLplffdGlretkhpyrflategikdlle 67 
                  +i+kL++   L +++dGl++++    +++++  ++l++
  EPX70624.1 525 GDISKLKFTGDLQTLLDGLVNSTGESILFSNKYSNKLTT 563
                 5899****************9988877777776666655 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 3
       ParcG   64 dlleaageekilpvlpklilplkeaLntrdeeviesaLkvlqklvkasel 113 
                  ++l++ ++++++ vl +li +l +  ++ + +v      +++kl+  s+ 
  EPX70624.1 1309 QHLQE-NDQRLVVVLENLISALSTPSESVQLAVASCISPLIKKLLPKSKQ 1357
                  45555.66677777777776555554444444444444444444444444 PP

  == domain 4  score: 1.6 bits;  conditional E-value: 0.2
       ParcG   36 ydalLplffdGlretkhpyrflategikdllea...ageekilpvlpklilplkeaLntrdeeviesaLkvlqklvkaselig....eaLvpyyrql 125 
                   + lLp ++dGl +    y+  ++++  ++l      + +++   lp ++  l e L+ ++++v  +a + l ++   +e+i+    ++Lvp + + 
  EPX70624.1 1476 VKLLLPSLLDGLND----YNWRSKRASVEILGLmsyMAPKQLSVSLPTIVPKLTEVLTDSHSQVRNTANNSLLRF---GEVISnpeiQNLVPVLLKA 1565
                  46789999999988....55555555555443333489999999*******************999998888766...5555411113455544444 PP

       ParcG  126 L 126 
                  L
  EPX70624.1 1566 L 1566
                  4 PP

  == domain 5  score: 3.3 bits;  conditional E-value: 0.056
       ParcG   36 ydalLplffdGlretkhpyrflategikdlleaageekilpvlpklilplkeaLntrdeeviesaL 101 
                   d+l+p + + l +   + r+ a +++  l+e+ ge+k  +++p+l   l++  +  d++  ++ L
  EPX70624.1 1636 LDPLMPRLREVLIDPVPDTRATAAKALGSLMEKLGETKFPTLIPELFNVLRSECSEVDRQGAAQGL 1701
                  4799999999*****************************************999888877666655 PP

  == domain 6  score: -1.2 bits;  conditional E-value: 1.4
       ParcG   50 tkhpyrflategikdllea...ageekilpvlpklilplkeaLntrdeeviesaLkvlqklvk 109 
                  t+ p  ++ ++ i+ l+     + + +  p l++ i p+ + L  ++e v +++L++ + +v+
  EPX70624.1 1724 TSSPTAYIRESFISLLI-YlpaTFGARFQPYLARAIPPILAGLADESELVQTASLRAAKMIVN 1785
                  55555555444443333.3355667788999************************99988875 PP

  == domain 7  score: 9.6 bits;  conditional E-value: 0.00068
       ParcG   37 dalLplffdGlretkhpyrflategikdlleaageekilpvlpklilplkeaLntrdeeviesaLkvlqklvkaseligeaL 118 
                  ++lLp + dGl  ++   r+    ++++l+++++++++     + +  ++eaL  +d ev e+a ++   l   +++ig+  
  EPX70624.1 1942 SQLLPSLKDGLESSDRENRIGVCIALQELISSTSQDQLEIYSDQFVYSVREALMDSDLEVREAAAEAFDTL---QTVIGDRA 2020
                  5799****************************99999999999*****************99999998888...66776543 PP

  == domain 8  score: 4.5 bits;  conditional E-value: 0.025
       ParcG   38 alLplffdGlretkhpyrflategikdlleaageekilpvlpklilplkeaLntrde.eviesaLkvlqklvkaseligeaLvpyyrqlLpvl 129 
                   +Lp+f+ G++  ++  r  +  g+ d++++a  +k+ p + ++  pl + +  r + ev  + L +l+ +    + i + L p++ ql  ++
  EPX70624.1 2242 SVLPIFLHGIMHGTNEQREQSALGVADIVTRAEADKLRPYVTQITGPLIRIIGERFPvEVKSAILYTLNII---LSKIPTFLRPFLPQLQRTF 2331
                  78*****************************99**************999998886614444455555443...4455555555555554443 PP

>> Tab2_like  RNA-binding protein Tab2/Atab2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.4   0.00013      0.18      39     154 ..     736     855 ..     700     904 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00013
   Tab2_like  39 sevnsswLaealeeaiak.......elPekirvFRpqmlnlitkaceelgikvepsrrtlaLkqwleereeevYpqeegyteqaaakeplaldkpppvp 130
                 ++v s+  ++ ++++          ++P  + +FR q  nl  + +++++ +v ++   +   ++le++ +++ +++++y+++     + +++++++++
  EPX70624.1 736 NNVRSEKEKAMISSISMIlfvapevATPLFVNLFRGQLVNLKLTNVSDMEYEVWKTPDGVLWDNVLEKKSNKIDKNTKDYETKL---WEAEVRAKQAQK 831
                 444444433333333222333344469*****************************************************5544...677788889999 PP

   Tab2_like 131 LPdalrgekwafvsLeaseleeak 154
                  P +l  ++  +v+L++++ ++ +
  EPX70624.1 832 KPMKLSKDQQVLVDLQLAKEAKIR 855
                 999************998766552 PP

>> RICTOR_V  Rapamycin-insensitive companion of mTOR, domain 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.56   7.7e+02      38      67 ..     330     359 ..     318     361 .. 0.89
   2 ?   -2.7   0.0       5.3   7.3e+03      53      69 ..     860     876 ..     858     876 .. 0.85
   3 ?    7.4   0.0    0.0037       5.1      18      58 ..    1389    1429 ..    1379    1432 .. 0.93

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.56
    RICTOR_V  38 espvlslRGtafyvLglissteegaeiLde 67 
                 +s++ ++R  +f  ++++++ ++ +++L e
  EPX70624.1 330 KSSNATVRQNCFHTFSVLCKHAKDSKVLME 359
                 78999***************9999998876 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 5.3
    RICTOR_V  53 glissteegaeiLdelg 69 
                 ++++s e+g ei++++g
  EPX70624.1 860 SMVASLERGLEIIQSMG 876
                 79999999999999887 PP

  == domain 3  score: 7.4 bits;  conditional E-value: 0.0037
    RICTOR_V   18 lGielldeydivedivelaeespvlslRGtafyvLglisst 58  
                  lGi+ +++ +i+++++e +++ ++ s+R  a++++  +s+t
  EPX70624.1 1389 LGIKAFKDFNIMDQLHESMTNRQSSSIRQGALFCVEAFSRT 1429
                  799999999******************************98 PP

>> HEAT_PBS  PBS lyase HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.72   9.9e+02       2      12 ..    1655    1665 ..    1654    1679 .. 0.88
   2 ?   -0.7   0.0       2.6   3.5e+03      15      27 .]    1755    1767 ..    1744    1767 .. 0.78
   3 ?    0.7   0.0      0.86   1.2e+03       2      25 ..    1922    1945 ..    1922    1945 .. 0.91
   4 ?    6.5   0.1     0.012        17       1      26 [.    2001    2033 ..    2001    2034 .. 0.96
   5 ?    0.2   0.2       1.3   1.7e+03       1      12 [.    2343    2354 ..    2343    2354 .. 0.90

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.72
                  HHHHHHHHHHC CS
    HEAT_PBS    2 RraAakaLgql 12  
                  R+ AakaLg l
  EPX70624.1 1655 RATAAKALGSL 1665
                  899******87 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 2.6
                  GGGHHHHHHHCTC CS
    HEAT_PBS   15 eeaipaLleaLqd 27  
                   +aip++l+ L+d
  EPX70624.1 1755 ARAIPPILAGLAD 1767
                  79*******9987 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.86
                  HHHHHHHHHHCTSGGGHHHHHHHC CS
    HEAT_PBS    2 RraAakaLgqlgdeeaipaLleaL 25  
                  R+ ++k+Lg l  ++  ++L ++L
  EPX70624.1 1922 RAMCVKSLGDLSKKAGFDVLSQLL 1945
                  7789**************998887 PP

  == domain 4  score: 6.5 bits;  conditional E-value: 0.012
                  HHHHHHHHHHHCTS.......GGGHHHHHHHCT CS
    HEAT_PBS    1 vRraAakaLgqlgd.......eeaipaLleaLq 26  
                  vR aAa+a  +l++       +e++p Ll++L+
  EPX70624.1 2001 VREAAAEAFDTLQTvigdravDEVLPELLKLLE 2033
                  9*****************************997 PP

  == domain 5  score: 0.2 bits;  conditional E-value: 1.3
                  HHHHHHHHHHHC CS
    HEAT_PBS    1 vRraAakaLgql 12  
                  +R +Aa aLg+l
  EPX70624.1 2343 IRSRAATALGTL 2354
                  599*******97 PP

>> FANCI_S2  FANCI solenoid 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.4      0.41   5.6e+02      86     130 ..     364     407 ..     312     422 .. 0.77
   2 ?   -2.3   0.0       3.6     5e+03      63      93 ..    1321    1351 ..    1290    1379 .. 0.69
   3 ?   13.2   0.1     6e-05     0.083      35     163 ..    1878    2009 ..    1847    2009 .. 0.73

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.41
    FANCI_S2  86 LselvksapltllesssklkelldylsflpletatallkAllPLl 130
                 L++  k++++t +e+ +   e+l +ls+ ++  +t llk +lPL+
  EPX70624.1 364 LTSALKTNKVTSNEHRNLYMECLSHLSV-KEIDSTSLLKEVLPLF 407
                 5555677777778888888888888855.4556888999999986 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 3.6
    FANCI_S2   63 iieqllsriitkseeevsqyiklLselvksa 93  
                  ++e+l+s + t se+    ++ ++s l+k+ 
  EPX70624.1 1321 VLENLISALSTPSESVQLAVASCISPLIKKL 1351
                  5666666666666666666666666666665 PP

  == domain 3  score: 13.2 bits;  conditional E-value: 6e-05
    FANCI_S2   35 ktvaqaaaklgsqiLlelfkvhesarseiieqllsriitkseeevsqyiklLselvksapltllesssklkelldylsflpletatallkAllPLlk 131 
                  + v  +a+++ ++i++++ ++ +++  ++ + ++ ++ ++ ++  + ++k L++l k+a  ++l++   l  l d l+  + e+  ++  Al+ L+ 
  EPX70624.1 1878 AAVRTNAQQIWKNIVVNTPRTVRDIITTLTSLIIGNLNSAGNDRRAMCVKSLGDLSKKAGFDVLSQL--LPSLKDGLESSDRENRIGVCIALQELIS 1972
                  334444555555666666666666666666677777777777778889**************97544..45555666677***************98 PP

    FANCI_S2  132 vs.....eslrdalilvLRKalfsreldaRkiAvaGf 163 
                   +     e   d+++  +R al+ ++l++R++A  +f
  EPX70624.1 1973 STsqdqlEIYSDQFVYSVREALMDSDLEVREAAAEAF 2009
                  7733222235688********************9988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2670 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1006  (0.0561102); expected 358.6 (0.02)
Passed bias filter:                      627  (0.0349713); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 1.49u 0.34s 00:00:01.83 Elapsed: 00:00:00.54
# Mc/sec: 14750.04
//
Query:       EPX70625.1  [L=249]
Description: U3 snoRNP-associated protein Utp11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.3e-69  232.1  30.9    1.1e-68  231.9  30.9    1.0  1  Utp11     Utp11 protein
  ------ inclusion threshold ------
      0.021   14.1   0.2      0.021   14.1   0.2    2.3  3  SLATT_5   SMODS and SLOG-associating 2TM effector domain fami
      0.052   13.8   0.3       0.11   12.7   0.3    1.5  1  Imm5      Immunity protein Imm5


Domain annotation for each model (and alignments):
>> Utp11  Utp11 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  231.9  30.9   1.8e-72   1.1e-68       1     245 []      11     249 .]      11     249 .] 0.91

  Alignments for each domain:
  == domain 1  score: 231.9 bits;  conditional E-value: 1.8e-72
       Utp11   1 rrnHkERsQpaeRaklGlLEKkKDYklRAkdyhkKqaklkaLreKAaerNpDEFyfgMiksktkkgvhvekekdrgnealsedqvkllktqDlnYvrtk 99 
                 r+nH+ER+Qp+eR+klGlLEK+KDY+ RA+dy+ Kq+k+k+LreKA+erNpDEFy+gM+++ktk+gv     ++r+++++++d++k+lktqD++++r++
  EPX70625.1  11 RQNHRERAQPNERRKLGLLEKRKDYVARAQDYKDKQKKIKRLREKAQERNPDEFYYGMTHKKTKNGVPQ---EEREDSSIDMDTIKILKTQDIGWIRHH 106
                 89****************************************************************995...5688999******************** PP

       Utp11 100 raierkkiekleeelhlleaeakseakeskkkkknkhivFvdseeeakefdaaekfetepelleeeeeeekeerkenrkkvkq.............k.. 183
                 r ier+kie+le+++h++ a++        k++ +kh++Fvd ++ea +fd+a++f+t++el++         r+enr +v+q             +  
  EPX70625.1 107 RDIERSKIEELEQKMHMVGAQRF-------KSEPRKHTLFVDGQKEAIQFDPAKHFQTSAELVN---------RAENRLRVDQigevnmrvedfssRlh 189
                 *****************986442.......234679****************************.........99999999999999999988876265 PP

       Utp11 184 ekkkeklykeLkarlerekqLkkaeqelelqralmkkgakkkvkkgkkkkaavykwkkeRkr 245
                 +k kek+ +eL  r++r+++L++ae++++l r l++kg ++k k ++   +++ykw++eRkr
  EPX70625.1 190 RKLKEKTARELLLRKKRDSKLAAAEERVQLDRLLQGKGGRQKKKTKD--GKPIYKWRNERKR 249
                 899999*****************************999655554433..348*********9 PP

>> SLATT_5  SMODS and SLOG-associating 2TM effector domain family 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.2   3.6e-06     0.021      79     117 ..      27      60 ..      26      99 .. 0.84
   2 ?    0.1   0.0     0.072   4.3e+02       2      25 ..     111     134 ..     110     138 .. 0.88
   3 ?   -2.4   0.1      0.42   2.5e+03      97      97 ..     177     177 ..     152     235 .. 0.59

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 3.6e-06
     SLATT_5  79 sllessknykerAekfhkcaleLselynelrllliseed 117
                 +lle+ k+y +rA+ +++ ++++++l ++ ++     ++
  EPX70625.1  27 GLLEKRKDYVARAQDYKDKQKKIKRLREKAQE-----RN 60 
                 689*************************9887.....33 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.072
     SLATT_5   2 keeleelkrkiwvTkkaRfnAaeR 25 
                 ++++eel++k++++   Rf+ + R
  EPX70625.1 111 RSKIEELEQKMHMVGAQRFKSEPR 134
                 6899***************99988 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 0.42
     SLATT_5  97 c 97 
                  
  EPX70625.1 177 V 177
                 1 PP

>> Imm5  Immunity protein Imm5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.3   1.9e-05      0.11      50      99 ..      16      65 ..      11      73 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1.9e-05
        Imm5 50 eevfaedqsplrlLekaedylyektdkeeiekeadklsndlendsgeeae 99
                e++ +++++ l+lLek +dy+ + +d+++ +k++++l++ +++++ +e +
  EPX70625.1 16 ERAQPNERRKLGLLEKRKDYVARAQDYKDKQKKIKRLREKAQERNPDEFY 65
                5667899***********************************99888865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1566  (0.0873445); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 1628.10
//
Query:       EPX70626.1  [L=384]
Description: ribosome biogenesis protein Mra1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.9e-80  267.1   0.0    1.1e-79  266.6   0.0    1.2  1  EMG1      EMG1/NEP1 methyltransferase
  ------ inclusion threshold ------
       0.34   10.2   0.1        0.5    9.6   0.1    1.1  1  UbiA      UbiA prenyltransferase family


Domain annotation for each model (and alignments):
>> EMG1  EMG1/NEP1 methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  266.6   0.0   1.3e-83   1.1e-79       1     194 []     177     378 ..     177     378 .. 0.96

  Alignments for each domain:
  == domain 1  score: 266.6 bits;  conditional E-value: 1.3e-83
                 EEEEEES--B--GG...SCGGSB--HHHHCGG.TTSTTGGGSS-CHHHHHHHHHHHCSCHHCTT.EEEEEEETTSEEEEE-TT----SSHHHHHHHHHH CS
        EMG1   1 ivLeeasLelvkvk...kkseqLLnsddhkkilkklkreakeaRpDIvHqcLlalldspLnkagllqvyihttknvlIevnpqtRiPrtfkrFagLmvq 96 
                 +vL++a+Le++kv+   + ++qLLn+ddh+ ilkkl+r+ ++aRpDI+HqcLl+lldspLnkag+lqvyiht+k+vl+evnp++RiPrtfkrF+gLmvq
  EPX70626.1 177 VVLDQACLEIYKVGkakDAKYQLLNCDDHQGILKKLNRNIAQARPDITHQCLLTLLDSPLNKAGRLQVYIHTAKKVLVEVNPSVRIPRTFKRFSGLMVQ 275
                 89***********777799******************************************************************************** PP

                 HHCCSEEEETTEE.SCEEEECS-HHHHCCC.SEEEEE-TTSEE-..................EEEE-SSSS......---HHEEESSSS---HHHHHHH CS
        EMG1  97 LLkklsirategeekLlkviknpitdhlppgskiillsesaekklvdleefv.....vkpvvfvigamskgsvki..dykeeeisisnypLsaavvcsk 188
                 LL+klsir+ +g+ekLlkviknp+td+lpp++++ +ls++a+  +v +++++     +++v++ igam++g +++   +++e+isis+ypLsa+++csk
  EPX70626.1 276 LLHKLSIRSVNGNEKLLKVIKNPVTDYLPPNCRKATLSFDAP--TVPTRKYLeklepNQSVCIAIGAMAHGPDDFsdGWVDEKISISDYPLSASIACSK 372
                 ******************************************..566888888888999************77666578889***************** PP

                 HHHHCH CS
        EMG1 189 iltafE 194
                 +++++E
  EPX70626.1 373 FIHSME 378
                 ***998 PP

>> UbiA  UbiA prenyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.1   5.6e-05       0.5      44      68 ..     130     154 ..     124     158 .. 0.90

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 5.6e-05
        UbiA  44 DreiDadmertpnRPlvsGrispke 68 
                 D+e+D   ++t nRPl++G +++ +
  EPX70626.1 130 DVEKDITQRNTGNRPLPAGSVHRTT 154
                 999******************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (384 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       896  (0.0499749); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.29s 00:00:00.84 Elapsed: 00:00:00.47
# Mc/sec: 2461.39
//
Query:       EPX70627.1  [L=323]
Description: hypothetical protein SOCG_04329 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.4e-08   32.7   1.9    4.4e-08   32.7   1.9    3.7  5  PNRC      Proline-rich nuclear receptor coactivator motif


Domain annotation for each model (and alignments):
>> PNRC  Proline-rich nuclear receptor coactivator motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.3      0.27   4.8e+03       8      14 ..      35      41 ..      32      41 .. 0.82
   2 ?   -1.7   1.3      0.15   2.8e+03      15      19 ..     136     140 ..     135     140 .. 0.91
   3 !   32.7   1.9   2.5e-12   4.4e-08       1      20 []     161     180 ..     161     180 .. 0.99
   4 ?   -3.0   1.0       0.4   7.2e+03       9      13 ..     213     217 ..     211     217 .. 0.81
   5 ?   -2.8   0.1      0.35   6.3e+03       4      11 ..     283     291 ..     283     291 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.27
        PNRC  8 nSPePSs 14
                +SP +Ss
  EPX70627.1 35 ESPLASS 41
                79*9998 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.15
        PNRC  15 LPlPs 19 
                 LP+P+
  EPX70627.1 136 LPKPP 140
                 9***8 PP

  == domain 3  score: 32.7 bits;  conditional E-value: 2.5e-12
        PNRC   1 YAGsaFsnSPePSsLPlPsF 20 
                 YAG++F+ SP++S+LP+P+F
  EPX70627.1 161 YAGPTFTHSPAASNLPIPTF 180
                 9******************9 PP

  == domain 4  score: -3.0 bits;  conditional E-value: 0.4
        PNRC   9 SPePS 13 
                 SP PS
  EPX70627.1 213 SPTPS 217
                 99998 PP

  == domain 5  score: -2.8 bits;  conditional E-value: 0.35
        PNRC   4 saF.snSPe 11 
                 s F snS++
  EPX70627.1 283 SRFqSNSHA 291
                 579899985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       476  (0.0265492); expected 358.6 (0.02)
Passed bias filter:                      271  (0.0151152); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:01.45
# Mc/sec: 672.67
//
Query:       EPX70628.1  [L=687]
Description: LEM domain-containing protein Heh1/Lem2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-71  242.0   0.2      2e-71  241.2   0.2    1.3  1  MSC       Man1-Src1p-C-terminal domain
      6e-10   38.7   0.0    1.7e-09   37.2   0.0    1.9  1  HeH       HeH/LEM domain
  ------ inclusion threshold ------
       0.23   11.8   2.9       0.19   12.1   0.5    2.1  2  Wzz       Chain length determinant protein


Domain annotation for each model (and alignments):
>> MSC  Man1-Src1p-C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  241.2   0.2   3.4e-75     2e-71       2     337 ..     340     677 ..     339     678 .. 0.94

  Alignments for each domain:
  == domain 1  score: 241.2 bits;  conditional E-value: 3.4e-75
         MSC   2 llvllilfglwYreekiavGyCgtgsetnsileeeeeeeeslleslkPkCtpCPehAiCysnlevkCepgyvlkphplslggllPlppsCvpdsekerk 100
                 l vl+++f+ ++r e+++vGyC+++s+ ++++++           l  +CtpCP+h++C++n++++C++gy+l+++++s +gl+P  ++C  d+++e+ 
  EPX70628.1 340 LGVLVAVFLNLWRDEVYRVGYCDVPSKGSTVVQK---------LGLGASCTPCPPHSTCFPNFQLRCDSGYILNEPWYSKFGLWP-RKNCLSDTDREES 428
                 66889999999***************88888875.........48899*************************************.************* PP

         MSC 101 vkevakkalelLreknakvecgeskdde.ek....................akksglseeeLkeslsekksksiskeefeelwkealkeLkkeeeivvr 178
                 v  + +++l++Lr++n+ ++cg+  dd  ek                    a+++ +s + L+ +l+ekks+ +s + f++l+k+al +L ++eei ++
  EPX70628.1 429 VIIFYEESLDVLRTWNSMYQCGRLPDDLiEKnktlskmdpyifngvkksktAHQPLFSITLLRHTLLEKKSPNLSLSLFNDLFKAALYQLANTEEIQMD 527
                 ************************88888335689999*********999999999****************************************333 PP

         MSC 179 edseseseksskekkkllrstslaklslkcrlrrsvretlaryrllllglllllllilylrsrlrsrraekerveelvkevlerLkkqkkkhaedpsta 277
                               ++++ s s+a+++l+crlrr+v++t+++y++++l ++ll  ++  +  ++  r+++++  +   + ++++Lk+qk++++++++++
  EPX70628.1 528 --------------EENIGSRSWANVPLRCRLRRQVYRTIWKYKFIILLFTLLNTCLYKIYTYFVLRKKTQRYLPFASRFCIDTLKRQKALYQSSRTSQ 612
                 ..............37899**********************************999999999999*****************************99887 PP

         MSC 278 pepylslvqLRDdvLqdehs.......lkernrlWkkvekvveqnsnVrtsleevhGeimrvWeWiG 337
                 p  +++l++++D++L +++         ke + lW  v+k+veq  ++rt+++ev+Ge++rvWeW+G
  EPX70628.1 613 P--VVPLIEMHDLLLHSHNVlehfgltEKEGRLLWDSVVKKVEQVGSIRTREAEVDGEWTRVWEWVG 677
                 7..************987668999988888889*********************************9 PP

>> HeH  HeH/LEM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.2   0.0   2.9e-13   1.7e-09       1      34 [.      11      44 ..      11      45 .. 0.96

  Alignments for each domain:
  == domain 1  score: 37.2 bits;  conditional E-value: 2.9e-13
         HeH  1 pksLtVaqLRriLvehgveyPsnaKKadLveLfn 34
                ++sL+Va+L+riL   +v+yP+  +Kad+++L++
  EPX70628.1 11 LRSLRVADLKRILRNANVDYPVYGRKADYLQLVE 44
                68******************************98 PP

>> Wzz  Chain length determinant protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1       1.7     1e+04      25      36 ..     336     347 ..     335     353 .. 0.71
   2 ?   12.1   0.5   3.1e-05      0.19       8      39 ..     549     581 ..     547     586 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.7
                 XXXXXXXXXXXX CS
         Wzz  25 lfallaviyafl 36 
                 l++ll+v++a++
  EPX70628.1 336 LTILLGVLVAVF 347
                 678888888754 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 3.1e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXX CS
         Wzz   8 LlsvLwkrkklIilvtllfallaviya.flatp 39 
                  ++++wk k++I+l+tll ++l  iy+ f++++
  EPX70628.1 549 VYRTIWKYKFIILLFTLLNTCLYKIYTyFVLRK 581
                 6799***********************777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (687 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       990  (0.0552178); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.80u 0.36s 00:00:01.16 Elapsed: 00:00:00.57
# Mc/sec: 3605.44
//
Query:       EPX70629.1  [L=589]
Description: ribosomal DNA transcription factor Rrn3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     9e-163  542.8   3.6     1e-162  542.6   3.6    1.0  1  RRN3      RNA polymerase I specific transcription initiation 
  ------ inclusion threshold ------
      0.043   13.7   0.1      0.099   12.5   0.1    1.5  1  NMT       Myristoyl-CoA:protein N-myristoyltransferase, N-ter
      0.049   14.0   0.6       0.51   10.7   0.6    2.4  2  FlgD      Flagellar hook capping protein - N-terminal region
       0.13   12.1   0.4       0.49   10.2   0.1    2.1  3  YniB      YniB-like protein


Domain annotation for each model (and alignments):
>> RRN3  RNA polymerase I specific transcription initiation factor RRN3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  542.6   3.6  2.3e-166    1e-162       3     557 ..      47     567 ..      45     568 .. 0.91

  Alignments for each domain:
  == domain 1  score: 542.6 bits;  conditional E-value: 2.3e-166
        RRN3   3 fskkmlkefVrnALeekekgdseqydeLleqfsekkeeseapslaelkqllkalssvvsrLershssLveailslkWlerdeafvkayieFlgeLvsaq 101
                 + ++m+++fV +AL++k++g+  +y+++ +qfs ++++++aps+ ++++ll+al+ +vsrL++s+ssL+++il   W++rde+fv+ y++Flg+L+saq
  EPX70629.1  47 LMQHMFRAFVGKALDDKSSGNVAAYEDMRRQFSIRPDSKDAPSSVQIQNLLSALTCNVSRLDSSCSSLITSILGSVWVSRDESFVRCYTKFLGHLLSAQ 145
                 6789*********************************************************************************************** PP

        RRN3 102 pkylsevlsklvqnfteqsessaalpessevtrrevyerlHelLkkllsliPtlasvlqpllakkfPhkreskkaqvtYirnllklteycpelsedile 200
                 ++y+  v+++l+q++ +qs            + + +ye++H++Lk++l+l+P ++s+l +++ ++fP+k+es  aq+tYi+n+l++ ey+p+l+  +l+
  EPX70629.1 146 STYMPLVMTMLIQHMCYQS-----------NSLAIHYEHAHMALKYVLDLVPRAHSYLYSCILEEFPYKDESILAQMTYISNVLSICEYVPSLKGPVLH 233
                 *******************...........457899*************************************************************** PP

        RRN3 201 liverlikiDVeiqvele.dlddeedeeleeeleededdedddeddeesdlddlssdeeaeedeekdeeeeslkkikelvekLDailtllfehlekkfs 298
                 ++++++i++DVeiqvel+ + d+++  + ++++++d    ++  + +   ++dl+ ++  ++d        s  ++k+++ +LD++l +lf++l+k   
  EPX70629.1 234 AVIDKIIQVDVEIQVELDiEDDEDS--DSSDDAASDVLTASALYERHAGASEDLTASTLLNDDP------LSPVDTKQTLLQLDQLLYTLFSYLSK--- 321
                 *****************74444444..3444434433344444444555666666665565553......2346889*******************... PP

        RRN3 299 sestkeeeeeeeglelfntLlslFkstiLptyksrhvqFllFhfssldpeladkflglLidialsknepaetRvaAaaYlaSfvaRAkfvskeqvrkvv 397
                  +     ++++++  ++n+L+++F +t+L+t+++r++qFl+F++s+l+pe++d flg+L++++l++++p + R++ a Yl+S+vaRAk +++++++ +v
  EPX70629.1 322 -N----LNQSRDRYVVYNSLIRSFVNTVLKTFRCRYTQFLIFWASQLNPEFTDIFLGVLTEVCLDPSQPYTLRISGAMYLGSYVARAKTLEASTIQIIV 415
                 .2....244455569************************************************************************************ PP

        RRN3 398 slLvewlekyvdereeevqgpdlkrhkvFYavaQAllYifCFRwrdLlkeeee...kekdrkwlqelkvlqrviiskLnPLkvcspnVveeFakiaqal 493
                  l+++w+e+y+d++e+e + + +++h+vFYa+ Q++lYi CFRw++L  ++e+   + k+ +wl++l+vl+r ++s+LnPL++cspn+v++Fa+ia++l
  EPX70629.1 416 GLMTRWMEAYLDQCENELSDDLISKHSVFYAINQSVLYIYCFRWQELRISDETdpmDPKPAEWLPGLEVLHRSVLSRLNPLRYCSPNIVHQFARIANHL 514
                 ***********************************************998775788889**************************************** PP

        RRN3 494 qllycysilesnkrerlsgieskstakkkqeaaeLdsyFPFDPykLprskrfieelYveWseva 557
                 +++y+ysile+n++ +++           +  +++ds+FPFDPy+L +s++++++ Y+eW++v+
  EPX70629.1 515 NFMYVYSILEQNRKGSIR-----------DGLETIDSFFPFDPYRLSKSSSIVQPFYNEWRPVP 567
                 **************7444...........44579***************************996 PP

>> NMT  Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   2.2e-05     0.099      17      80 ..     311     374 ..     296     380 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 2.2e-05
                 --STTEEEEE--TTSHHHHHHHHHHHHHHSSCTTTSTEEE---HHHHHHHCTSTT--GGGEEEE CS
         NMT  17 klpkgfewvtvdledeeelkevyelLsenYvedddamfrfkyskeflkWalkppgykkewhvgv 80 
                  l + f++ + +l+++++   vy+ L + +v+   ++fr +y++ ++ Wa +     ++  +gv
  EPX70629.1 311 LLYTLFSYLSKNLNQSRDRYVVYNSLIRSFVNTVLKTFRCRYTQFLIFWASQLNPEFTDIFLGV 374
                 467789*******************************************987665555666665 PP

>> FlgD  Flagellar hook capping protein - N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.38   1.7e+03      49      64 ..     203     218 ..     201     227 .. 0.79
   2 ?   10.7   0.6   0.00011      0.51      39      60 ..     290     311 ..     284     315 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.38
        FlgD  49 DnnqmisQlaqfStve 64 
                  ++ +++Q++ +S+v 
  EPX70629.1 203 KDESILAQMTYISNVL 218
                 5677899******985 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00011
        FlgD  39 LknQDPlnPmDnnqmisQlaqf 60 
                 L n DPl+P+D++q + Ql q+
  EPX70629.1 290 LLNDDPLSPVDTKQTLLQLDQL 311
                 7899**************9875 PP

>> YniB  YniB-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       2.3     1e+04      61      92 ..      31      62 ..      29      74 .. 0.72
   2 ?   -3.0   0.1       1.2   5.4e+03      11      45 ..     213     245 ..     208     248 .. 0.75
   3 ?   10.2   0.1   0.00011      0.49      10      71 ..     310     372 ..     304     378 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 2.3
        YniB 61 sPvPdfkellassniaFlliylliFvGlalqa 92
                s vP+ + + ++++ + +   +  FvG al  
  EPX70629.1 31 SSVPSSEGVASKHDSQLMQHMFRAFVGKALDD 62
                66777777777777777777778888888864 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.2
        YniB  11 llstlisllkllyaksekkeginavladfikvlve 45 
                  +s ++s+ ++  + s k+  ++av+++ i+v ve
  EPX70629.1 213 YISNVLSICEY--VPSLKGPVLHAVIDKIIQVDVE 245
                 57777777775..4677888999999999888776 PP

  == domain 3  score: 10.2 bits;  conditional E-value: 0.00011
        YniB  10 allstlisll.kllyaksekkeginavladfikvlvelvrfntpfLnvFWknsPvPdfkella 71 
                  ll tl+s l k l+++++++   n+ +  f++++ +  r   +   +FW     P+f++++ 
  EPX70629.1 310 QLLYTLFSYLsKNLNQSRDRYVVYNSLIRSFVNTVLKTFRCRYTQFLIFWASQLNPEFTDIFL 372
                 688999997736788999999999****************97666669********9999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (589 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       506  (0.0282224); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.62u 0.29s 00:00:00.90 Elapsed: 00:00:00.48
# Mc/sec: 3662.40
//
Query:       EPX70630.1  [L=309]
Description: hypothetical protein SOCG_04326 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.2e-64  215.8   0.0    5.5e-64  215.5   0.0    1.1  1  ThiJ_like  ThiJ/PfpI family-like


Domain annotation for each model (and alignments):
>> ThiJ_like  ThiJ/PfpI family-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  215.5   0.0   3.1e-68   5.5e-64       1     196 []      49     248 ..      49     248 .. 0.98

  Alignments for each domain:
  == domain 1  score: 215.5 bits;  conditional E-value: 3.1e-68
   ThiJ_like   1 ladeGydvtevaipwkvlkdagfsveFvtekgk....vpkadekllsgikakllgaskeakdiYkelstleeFkeplslssesFsleeydlvllpGGsd 95 
                 + d+G+dv++v++pw++++d+gf+veFv++k +    v+k+d ++ +g+k++l+g+sk+++diY+ l+tl+eF +p+ +++++Fs+ ++d+vl++GG++
  EPX70630.1  49 MTDYGFDVEQVCLPWRYFTDRGFMVEFVFPKPIdpprVAKPDPSYTTGWKGTLMGPSKDTMDIYSILCTLDEFIQPKFYKDDNFSFLDFDVVLITGGRN 147
                 89*****************************988889************************************************************** PP

   ThiJ_like  96 kavrelleserlhsllveylklvkrek........epskvlgaicqgvlalafakpeldlktttlPlwmertsillgstaeklgyyYktyliseavead 186
                 +++r++l +++lhs+l++yl l+kr +        + sk+lg+i+qg+l ++  +p + l++tt+P+wmer++++l++ +++++y Y+++l+       
  EPX70630.1 148 EPMRQMLMDPLLHSKLKPYLTLCKRIDrqkdgpnvSMSKILGTIAQGALPIYINNPGTTLHATTIPVWMERANSWLSPPPNNSSYSYAASLM------- 239
                 **************************999*************************************************************99....... PP

   ThiJ_like 187 vpeskyvagP 196
                  p+++y agP
  EPX70630.1 240 -PTDNYSAGP 248
                 .999999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (309 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       287  (0.0160076); expected 358.6 (0.02)
Passed bias filter:                      272  (0.015171); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.48
# Mc/sec: 1952.71
//
Query:       EPX70631.1  [L=129]
Description: hypothetical protein SOCG_04325 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       371  (0.0206927); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.28s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 914.91
//
Query:       EPX70632.1  [L=195]
Description: 40S ribosomal protein S7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.7e-80  269.1   0.4    1.9e-80  269.0   0.4    1.0  1  Ribosomal_S7e  Ribosomal protein S7e


Domain annotation for each model (and alignments):
>> Ribosomal_S7e  Ribosomal protein S7e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  269.0   0.4   1.1e-84   1.9e-80       1     183 [.       6     188 ..       6     189 .. 0.99

  Alignments for each domain:
  == domain 1  score: 269.0 bits;  conditional E-value: 1.1e-84
                    TTCSSS-S---HHHHHHHHHHHHHHHHTSSCHHHHTT--ECEEEEEEETSSCEEEEEEEEHHHHHHTTTCHHHHHHHHHHHC.SSEEEEEEE---- CS
  Ribosomal_S7e   1 kivkpkgeepteleeqvaqalldleanssdlkaelrelqissakevevkkkkkaivifvpvpllkafqkiqqrlvreLeKkfsgkhvvfvaqRril 96 
                    kivk+++++p+e++  vaq+l+dle++s+d+ +elr+lqi+sa+evev+++kkaiv+fvp pll+af+k+q rl+reLeKkf+++hv+f+aqRril
     EPX70632.1   6 KIVKRSSSQPSETDLLVAQCLFDLENSSKDMAKELRPLQITSAREVEVGAGKKAIVVFVPQPLLTAFHKCQARLTRELEKKFADRHVIFIAQRRIL 101
                    7999******************************************************************************************** PP

                    -SSCG.TTSTSS--TTSSHHHHHHHHHHHHCTTS-EEEEEEEE-SSS-EEEEEEEESCTCCCHHHHHHHHHHHHHHHHS-BEEEEEE CS
  Ribosomal_S7e  97 kkptrrskkkqkrprsrtltaVhdaiLedlvyPseivGkrirvrldgskllkvfLdkkdqnnveekldtfsavykkLtgkdvvFefp 183
                    +kp r+s+  qkrprsrtlt+Vh aiLed+v+P++i+Gkr+r  +dg+k++kvfLd++d+n+v++kl +fs+vy+kLtgk+v+Fefp
     EPX70632.1 102 PKPGRKSRVGQKRPRSRTLTSVHSAILEDIVFPTTIIGKRTRQGTDGHKTMKVFLDNRDANTVDYKLSSFSNVYHKLTGKTVNFEFP 188
                    **************************************************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       446  (0.0248759); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.32s 00:00:00.85 Elapsed: 00:00:00.53
# Mc/sec: 1109.70
//
Query:       EPX70633.1  [L=303]
Description: EB1 family Mal3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-16   60.5   0.2    2.5e-16   59.6   0.2    1.5  1  EB1       EB1-like C-terminal motif
     0.0032   17.6   1.7     0.0035   17.5   0.4    1.7  2  CH        Calponin homology (CH) domain
  ------ inclusion threshold ------
      0.021   15.0   0.1      0.038   14.1   0.1    1.4  1  CH_2      CH-like domain in sperm protein


Domain annotation for each model (and alignments):
>> EB1  EB1-like C-terminal motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.6   0.2   4.2e-20   2.5e-16       1      41 []     191     233 ..     191     233 .. 0.96

  Alignments for each domain:
  == domain 1  score: 59.6 bits;  conditional E-value: 4.2e-20
                 HHHHHHHHHHHHHHHHHHHHH..TT----HHHHHHHHHHHHS- CS
         EB1   1 LekERdFYFsKLRdIEilcqt..epeleedlpivkkikkILYa 41 
                 Le+ERdFYF+KLR++Eil+qt  + e  +++ ++++i++ILY+
  EPX70633.1 191 LERERDFYFNKLREVEILVQThlSAEPMSHETMLERIQAILYS 233
                 8********************998899999************7 PP

>> CH  Calponin homology (CH) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.4   5.8e-07    0.0035       2     100 ..       3      95 ..       2     105 .. 0.84
   2 ?   -3.3   0.0       1.8     1e+04      15      31 ..     165     181 ..     158     185 .. 0.66

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 5.8e-07
                 HHHHHHHHHHHHHHTTSTTSSTTSCHHHHHTTSHHHHHHHHHHSTTTSSGGGSTTT...HHHHHHHHHHHHHHHHHHTTCHTTSS-HHHHHTTSHHHHH CS
          CH   2 eqkkellrWinshleeagpkvkvedfeedlrDGvlLckLlnklapglvdkkklnks...efkkleNinlaldvaekklgvpkvlieaedlvegknksvl 97 
                 e+++ell+W+n++++   +++      ed+  G  ++ ++++++++  ++kk+n++    +++++N + +l+ +  + g++kv  ++e l   k + +l
  EPX70633.1   3 ESRQELLAWLNEVTKLGLSRI------EDCGKGYTMLVIMDSIYQDV-PLKKVNFDcnnDYQYINNWK-VLQQVFLRKGIDKVV-DPERLSRCKMQDNL 92 
                 6799**********9876665......8999*************977.9999*999999********9.5555666*******9.***99985555554 PP

                 HHH CS
          CH  98 tll 100
                 +++
  EPX70633.1  93 EFV 95 
                 443 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.8
                 HTTSTTSSTTSCHHHHH CS
          CH  15 leeagpkvkvedfeedl 31 
                 l+ ++ +++++++e +l
  EPX70633.1 165 LRAKQAQQQITNLEGQL 181
                 44555666677776655 PP

>> CH_2  CH-like domain in sperm protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.1   6.4e-06     0.038       1      70 [.       8      75 ..       8      92 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 6.4e-06
        CH_2  1 llkWlqs.ldlsrsvknlkrdfsdGvlvAeilkkyypklvdlhnys.ngsslaaklnNWetLekvlkklgik 70
                ll+Wl++  +l  s     +d+  G+ +  i+  +y+  v l++ + ++++  + +nNW++L++v+ ++gi+
  EPX70633.1  8 LLAWLNEvTKLGLSRI---EDCGKGYTMLVIMDSIYQD-VPLKKVNfDCNNDYQYINNWKVLQQVFLRKGID 75
                5789999755654444...79***************99.8777654246666788**********9888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (303 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       768  (0.0428356); expected 358.6 (0.02)
Passed bias filter:                      570  (0.0317921); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.32s 00:00:00.94 Elapsed: 00:00:00.52
# Mc/sec: 1751.70
//
Query:       EPX70634.1  [L=398]
Description: F-box protein Pof14 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.1e-21   74.4   0.4    1.7e-20   73.0   0.4    1.7  1  F-box-like_2  F-box-like domain
  ------ inclusion threshold ------
        0.3   11.4   1.3       0.41   11.0   0.1    1.8  2  FpoO          F420H2 dehydrogenase subunit FpoO


Domain annotation for each model (and alignments):
>> F-box-like_2  F-box-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.0   0.4   1.9e-24   1.7e-20      11      94 ..     129     209 ..     121     216 .. 0.92

  Alignments for each domain:
  == domain 1  score: 73.0 bits;  conditional E-value: 1.9e-24
  F-box-like_2  11 tnaapkfrsltllDlPdellelifkgCkdpayeplspslakayrrkrkhieylLaqpkqcralkklltptskplWldelrvmdt 94 
                   +      ++ ++lD+Pde+l lif +C d  y++ + ++a++yrr ++ ++ +L  p +c++++k+l p++  +W+++l  +++
    EPX70634.1 129 ETNTTDMKKTSILDCPDEILLLIFIKCFDSTYKE-KFPFAFTYRREKHALIDDL--PYTCTRFRKILNPKNDGFWKRVLDLHKR 209
                   455567899*************************.*******************..***********************99875 PP

>> FpoO  F420H2 dehydrogenase subunit FpoO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.1         2   1.8e+04       9      18 ..     228     237 ..     226     246 .. 0.78
   2 ?   11.0   0.1   4.5e-05      0.41      54     105 ..     280     329 ..     261     334 .. 0.82

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 2
        FpoO   9 vsiPtviPvr 18 
                 v iP v+Pv 
  EPX70634.1 228 VQIPNVLPVM 237
                 6799999995 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 4.5e-05
        FpoO  54 eeasgtaGkcdlcgkktrlydvevqvPsfskgsekktaklckrcleaveeay 105
                 e a  ++G+c +cg   +    +  + sf +gs    +++c +clea+ + y
  EPX70634.1 280 EFARNVVGRCTVCGLLPKYTRNQECIRSFYRGSIA--TNVCDQCLEAIIDFY 329
                 5567789*************9999*******9986..689******997765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (398 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       707  (0.0394333); expected 358.6 (0.02)
Passed bias filter:                      518  (0.0288917); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.32s 00:00:00.92 Elapsed: 00:00:00.50
# Mc/sec: 2408.23
//
Query:       EPX70635.1  [L=175]
Description: zinc finger protein Byr3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.3e-51  169.7  56.7    3.5e-08   33.2   4.2    7.1  7  zf-CCHC    Zinc knuckle
      6e-14   51.5  45.1      0.031   14.0   0.7    7.0  7  zf-CCHC_4  Zinc knuckle
    1.2e-06   28.3  47.0       0.11   12.5   0.4    7.0  7  zf-CCHC_3  Zinc knuckle
    2.6e-05   23.9  41.0     0.0026   17.4   1.5    7.0  7  zf-CCHC_5  GAG-polyprotein viral zinc-finger
    0.00057   19.7   0.2    0.00057   19.7   0.2    7.2  7  zf-CCHC_2  Zinc knuckle
     0.0023   17.8  45.5       0.51   10.2   1.0    6.7  7  zf-CCHC_6  Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.2   4.2   1.2e-11   3.5e-08       2      18 .]      17      33 ..      16      33 .. 0.94
   2 !   29.3   2.2   1.9e-10   5.8e-07       3      18 .]      37      52 ..      36      52 .. 0.95
   3 !   26.6   0.7   1.4e-09   4.1e-06       1      18 []      57      74 ..      57      74 .. 0.94
   4 !   31.0   2.4   5.6e-11   1.7e-07       3      17 ..      88     102 ..      87     103 .. 0.93
   5 !   30.1   1.6   1.1e-10   3.3e-07       2      17 ..     113     128 ..     112     129 .. 0.93
   6 !   25.9   2.2   2.4e-09   7.2e-06       2      18 .]     132     148 ..     131     148 .. 0.93
   7 !   27.5   0.5   7.1e-10   2.1e-06       3      17 ..     155     169 ..     153     170 .. 0.93

  Alignments for each domain:
  == domain 1  score: 33.2 bits;  conditional E-value: 1.2e-11
                CTSSSSSSSSTTTTSTS CS
     zf-CCHC  2 kCynCGepGHiardCpk 18
                 CynCGe GH+ardC+k
  EPX70635.1 17 RCYNCGENGHQARDCTK 33
                6**************97 PP

  == domain 2  score: 29.3 bits;  conditional E-value: 1.9e-10
                TSSSSSSSSTTTTSTS CS
     zf-CCHC  3 CynCGepGHiardCpk 18
                CynC+++GH a+dC++
  EPX70635.1 37 CYNCNQTGHKASDCTE 52
                **************96 PP

  == domain 3  score: 26.6 bits;  conditional E-value: 1.4e-09
                SCTSSSSSSSSTTTTSTS CS
     zf-CCHC  1 rkCynCGepGHiardCpk 18
                ++Cy CG  GH+ r+Cp+
  EPX70635.1 57 KTCYACGTSGHLVRECPS 74
                58***************6 PP

  == domain 4  score: 31.0 bits;  conditional E-value: 5.6e-11
                 TSSSSSSSSTTTTST CS
     zf-CCHC   3 CynCGepGHiardCp 17 
                 Cy+CG++GHiardC 
  EPX70635.1  88 CYKCGRVGHIARDCR 102
                 **************7 PP

  == domain 5  score: 30.1 bits;  conditional E-value: 1.1e-10
                 CTSSSSSSSSTTTTST CS
     zf-CCHC   2 kCynCGepGHiardCp 17 
                  Cy CG++GH+ardC+
  EPX70635.1 113 NCYACGSVGHQARDCT 128
                 7**************9 PP

  == domain 6  score: 25.9 bits;  conditional E-value: 2.4e-09
                 CTSSSSSSSSTTTTSTS CS
     zf-CCHC   2 kCynCGepGHiardCpk 18 
                 kCy CG++GH++ +C +
  EPX70635.1 132 KCYSCGKIGHRSFECQQ 148
                 8**************86 PP

  == domain 7  score: 27.5 bits;  conditional E-value: 7.1e-10
                 TSSSSSSSSTTTTST CS
     zf-CCHC   3 CynCGepGHiardCp 17 
                 Cy+C++pGHia +C+
  EPX70635.1 155 CYKCNQPGHIAINCT 169
                 **************8 PP

>> zf-CCHC_4  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.6   1.8e-05     0.053      32      48 ..      16      32 ..      10      33 .. 0.84
   2 !   13.3   0.8   1.7e-05      0.05      32      48 ..      35      51 ..      34      52 .. 0.91
   3 !   11.5   0.5   6.3e-05      0.19      33      48 ..      58      73 ..      56      74 .. 0.91
   4 !   14.0   0.7   1.1e-05     0.031      34      48 ..      88     102 ..      83     103 .. 0.89
   5 !   13.8   0.9   1.2e-05     0.035      34      48 ..     114     128 ..     111     129 .. 0.90
   6 !   11.1   1.7   8.2e-05      0.25      32      48 ..     131     147 ..     128     148 .. 0.87
   7 !    4.6   0.6    0.0087        26      32      47 ..     153     168 ..     152     170 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.8e-05
   zf-CCHC_4 32 sfCyiCgvlGHsdkrCd 48
                  Cy+Cg  GH++++C 
  EPX70635.1 16 FRCYNCGENGHQARDCT 32
                44**************7 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 1.7e-05
   zf-CCHC_4 32 sfCyiCgvlGHsdkrCd 48
                 +Cy+C+  GH++++C 
  EPX70635.1 35 AICYNCNQTGHKASDCT 51
                58**************5 PP

  == domain 3  score: 11.5 bits;  conditional E-value: 6.3e-05
   zf-CCHC_4 33 fCyiCgvlGHsdkrCd 48
                 Cy Cg  GH +++C+
  EPX70635.1 58 TCYACGTSGHLVRECP 73
                6**************8 PP

  == domain 4  score: 14.0 bits;  conditional E-value: 1.1e-05
   zf-CCHC_4  34 CyiCgvlGHsdkrCd 48 
                 Cy Cg++GH +++C+
  EPX70635.1  88 CYKCGRVGHIARDCR 102
                 **************7 PP

  == domain 5  score: 13.8 bits;  conditional E-value: 1.2e-05
   zf-CCHC_4  34 CyiCgvlGHsdkrCd 48 
                 Cy Cg +GH++++C 
  EPX70635.1 114 CYACGSVGHQARDCT 128
                 **************6 PP

  == domain 6  score: 11.1 bits;  conditional E-value: 8.2e-05
   zf-CCHC_4  32 sfCyiCgvlGHsdkrCd 48 
                  +Cy+Cg +GH   +C+
  EPX70635.1 131 VKCYSCGKIGHRSFECQ 147
                 57**********99996 PP

  == domain 7  score: 4.6 bits;  conditional E-value: 0.0087
   zf-CCHC_4  32 sfCyiCgvlGHsdkrC 47 
                 ++Cy C+  GH + +C
  EPX70635.1 153 QLCYKCNQPGHIAINC 168
                 68*********99899 PP

>> zf-CCHC_3  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.9   2.1    0.0043        13       4      21 ..      15      32 ..      13      35 .. 0.84
   2 ?    2.9   6.6     0.038   1.1e+02       4      26 ..      34      57 ..      32      61 .. 0.83
   3 !   10.7   0.3   0.00013       0.4       3      22 ..      55      74 ..      53      83 .. 0.81
   4 !   12.5   0.4   3.7e-05      0.11       3      30 ..      84     109 ..      82     113 .. 0.76
   5 ?    1.3   0.4      0.12   3.5e+02       7      21 ..     114     128 ..     112     130 .. 0.82
   6 !   12.1   4.3   4.8e-05      0.14       6      25 ..     132     149 ..     127     152 .. 0.83
   7 !   10.3   0.5   0.00018      0.54       2      21 ..     150     169 ..     149     172 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0043
   zf-CCHC_3  4 saaCQkClkkGHwtYECk 21
                + +C +C++ GH +  C+
  EPX70635.1 15 GFRCYNCGENGHQARDCT 32
                569*********998887 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.038
   zf-CCHC_3  4 saaCQkClkkGHwtYECkn.ager 26
                +a C +C ++GH +  C++ ++e+
  EPX70635.1 34 GAICYNCNQTGHKASDCTEpQQEK 57
                689**************9976665 PP

  == domain 3  score: 10.7 bits;  conditional E-value: 0.00013
   zf-CCHC_3  3 asaaCQkClkkGHwtYECkn 22
                + ++C  C++ GH+  EC+ 
  EPX70635.1 55 QEKTCYACGTSGHLVRECPS 74
                6789**************94 PP

  == domain 4  score: 12.5 bits;  conditional E-value: 3.7e-05
   zf-CCHC_3   3 asaaCQkClkkGHwtYECknagerkytk 30 
                 ++a C kC+  GH +  C+      + +
  EPX70635.1  84 QGAECYKCGRVGHIARDCRS--NGRAGS 109
                 5789***************4..333334 PP

  == domain 5  score: 1.3 bits;  conditional E-value: 0.12
   zf-CCHC_3   7 CQkClkkGHwtYECk 21 
                 C  C++ GH +  C+
  EPX70635.1 114 CYACGSVGHQARDCT 128
                 778******887775 PP

  == domain 6  score: 12.1 bits;  conditional E-value: 4.8e-05
   zf-CCHC_3   6 aCQkClkkGHwtYECknage 25 
                  C  C+k GH ++EC++  +
  EPX70635.1 132 KCYSCGKIGHRSFECQQ--S 149
                 6999************5..3 PP

  == domain 7  score: 10.3 bits;  conditional E-value: 0.00018
   zf-CCHC_3   2 nasaaCQkClkkGHwtYECk 21 
                 n +++C kC ++GH +  C+
  EPX70635.1 150 NDGQLCYKCNQPGHIAINCT 169
                 67899*********998886 PP

>> zf-CCHC_5  GAG-polyprotein viral zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   1.1   0.00049       1.5       4      19 ..      17      32 ..      15      35 .. 0.94
   2 !    5.3   0.5    0.0053        16       5      18 ..      37      50 ..      33      52 .. 0.91
   3 !    6.0   0.4    0.0033       9.8       4      23 ..      58      77 ..      55      87 .. 0.81
   4 !   17.4   1.5   8.8e-07    0.0026       5      20 ..      88     103 ..      83     107 .. 0.93
   5 !    6.2   0.3    0.0029       8.6       3      18 ..     112     127 ..     110     129 .. 0.87
   6 ?    1.7   0.7     0.073   2.2e+02       5      19 ..     133     147 ..     131     153 .. 0.85
   7 !    5.7   0.2     0.004        12       3      18 ..     153     168 ..     151     169 .. 0.92

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00049
                B-TTT-SSBS-TTT-- CS
   zf-CCHC_5  4 lCpRCkkgkHwardCh 19
                +C  C+   H ardC 
  EPX70635.1 17 RCYNCGENGHQARDCT 32
                8**************5 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.0053
                -TTT-SSBS-TTT- CS
   zf-CCHC_5  5 CpRCkkgkHwardC 18
                C  C +  H a+dC
  EPX70635.1 37 CYNCNQTGHKASDC 50
                999*********** PP

  == domain 3  score: 6.0 bits;  conditional E-value: 0.0033
                B-TTT-SSBS-TTT---SEE CS
   zf-CCHC_5  4 lCpRCkkgkHwardChskfd 23
                 C  C+   H  r+C s   
  EPX70635.1 58 TCYACGTSGHLVRECPSNPN 77
                6999***********99755 PP

  == domain 4  score: 17.4 bits;  conditional E-value: 8.8e-07
                 -TTT-SSBS-TTT--- CS
   zf-CCHC_5   5 CpRCkkgkHwardChs 20 
                 C +C++  H ardC+s
  EPX70635.1  88 CYKCGRVGHIARDCRS 103
                 ***************9 PP

  == domain 5  score: 6.2 bits;  conditional E-value: 0.0029
                 -B-TTT-SSBS-TTT- CS
   zf-CCHC_5   3 glCpRCkkgkHwardC 18 
                   C  C+   H ardC
  EPX70635.1 112 MNCYACGSVGHQARDC 127
                 56999*********** PP

  == domain 6  score: 1.7 bits;  conditional E-value: 0.073
                 -TTT-SSBS-TTT-- CS
   zf-CCHC_5   5 CpRCkkgkHwardCh 19 
                 C  C+k  H   +C+
  EPX70635.1 133 CYSCGKIGHRSFECQ 147
                 999****9*999996 PP

  == domain 7  score: 5.7 bits;  conditional E-value: 0.004
                 -B-TTT-SSBS-TTT- CS
   zf-CCHC_5   3 glCpRCkkgkHwardC 18 
                  lC +C +  H a +C
  EPX70635.1 153 QLCYKCNQPGHIAINC 168
                 59***********999 PP

>> zf-CCHC_2  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.5   1.7    0.0053        16       2      19 ..      14      31 ..      13      31 .. 0.84
   2 !    5.9   1.5    0.0038        11       5      14 ..      36      45 ..      36      50 .. 0.84
   3 !   19.7   0.2   1.9e-07   0.00057       6      20 ..      59      73 ..      58      74 .. 0.92
   4 ?    0.1   1.4      0.26   7.7e+02       9      20 ..      91     102 ..      88     103 .. 0.82
   5 ?    1.6   1.4     0.082   2.5e+02       6      19 ..     114     127 ..     113     127 .. 0.83
   6 ?   -1.1   1.9      0.57   1.7e+03       6      14 ..     133     141 ..     132     142 .. 0.81
   7 !    5.4   0.9    0.0054        16       9      14 ..     158     163 ..     154     163 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0053
   zf-CCHC_2  2 pgYvChiCgkkGHyIqdC 19
                +g+ C  Cg  GH  +dC
  EPX70635.1 14 AGFRCYNCGENGHQARDC 31
                6889*********77777 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0038
   zf-CCHC_2  5 vChiCgkkGH 14
                +C  C++ GH
  EPX70635.1 36 ICYNCNQTGH 45
                7999****** PP

  == domain 3  score: 19.7 bits;  conditional E-value: 1.9e-07
   zf-CCHC_2  6 ChiCgkkGHyIqdCP 20
                C +Cg++GH +++CP
  EPX70635.1 59 CYACGTSGHLVRECP 73
                889************ PP

  == domain 4  score: 0.1 bits;  conditional E-value: 0.26
   zf-CCHC_2   9 CgkkGHyIqdCP 20 
                 Cg  GH  +dC+
  EPX70635.1  91 CGRVGHIARDCR 102
                 999999889996 PP

  == domain 5  score: 1.6 bits;  conditional E-value: 0.082
   zf-CCHC_2   6 ChiCgkkGHyIqdC 19 
                 C +Cg+ GH  +dC
  EPX70635.1 114 CYACGSVGHQARDC 127
                 889******77777 PP

  == domain 6  score: -1.1 bits;  conditional E-value: 0.57
   zf-CCHC_2   6 ChiCgkkGH 14 
                 C  Cgk GH
  EPX70635.1 133 CYSCGKIGH 141
                 666***9*9 PP

  == domain 7  score: 5.4 bits;  conditional E-value: 0.0054
   zf-CCHC_2   9 CgkkGH 14 
                 C+++GH
  EPX70635.1 158 CNQPGH 163
                 ****** PP

>> zf-CCHC_6  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   1.5   0.00089       2.6       3      15 ..      17      29 ..      16      32 .. 0.89
   2 ?    4.3   0.3     0.012        36       4      18 ..      37      51 ..      36      58 .. 0.82
   3 !    9.1   0.3   0.00038       1.1       4      21 ..      59      74 ..      55      84 .. 0.86
   4 !    6.0   1.5    0.0036        11       4      16 ..      88     100 ..      86     103 .. 0.87
   5 !   10.2   1.0   0.00017      0.51       3      15 ..     113     125 ..     112     129 .. 0.85
   6 !    9.9   2.0   0.00021      0.64       2      13 ..     131     142 ..     130     147 .. 0.90
   7 ?   -2.1   0.3       1.2   3.7e+03       4      15 ..     155     166 ..     155     171 .. 0.72

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.00089
   zf-CCHC_6  3 KCknCGAFGHtar 15
                +C nCG  GH+ar
  EPX70635.1 17 RCYNCGENGHQAR 29
                8**********97 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.012
   zf-CCHC_6  4 CknCGAFGHtarSkr 18
                C nC   GH+a+  +
  EPX70635.1 37 CYNCNQTGHKASDCT 51
                99*********8655 PP

  == domain 3  score: 9.1 bits;  conditional E-value: 0.00038
   zf-CCHC_6  4 CknCGAFGHtarSkrCPm 21
                C +CG  GH +  + CP 
  EPX70635.1 59 CYACGTSGHLV--RECPS 74
                99*********..89996 PP

  == domain 4  score: 6.0 bits;  conditional E-value: 0.0036
   zf-CCHC_6   4 CknCGAFGHtarS 16 
                 C +CG  GH ar 
  EPX70635.1  88 CYKCGRVGHIARD 100
                 99*******9975 PP

  == domain 5  score: 10.2 bits;  conditional E-value: 0.00017
   zf-CCHC_6   3 KCknCGAFGHtar 15 
                  C +CG  GH+ar
  EPX70635.1 113 NCYACGSVGHQAR 125
                 5**********97 PP

  == domain 6  score: 9.9 bits;  conditional E-value: 0.00021
   zf-CCHC_6   2 vKCknCGAFGHt 13 
                 vKC  CG +GH+
  EPX70635.1 131 VKCYSCGKIGHR 142
                 8**********7 PP

  == domain 7  score: -2.1 bits;  conditional E-value: 1.2
   zf-CCHC_6   4 CknCGAFGHtar 15 
                 C +C   GH a 
  EPX70635.1 155 CYKCNQPGHIAI 166
                 778888888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       684  (0.0381505); expected 358.6 (0.02)
Passed bias filter:                      159  (0.00886831); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.63u 0.33s 00:00:00.96 Elapsed: 00:00:00.56
# Mc/sec: 948.88
//
Query:       EPX70636.1  [L=234]
Description: tRNA methyltransferase Trm9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.4e-10   39.6   0.0    1.1e-09   38.8   0.0    1.4  1  Methyltransf_11  Methyltransferase domain
    1.1e-06   29.3   0.0    2.9e-06   27.9   0.0    1.7  1  Methyltransf_25  Methyltransferase domain
    0.00023   21.0   0.0    0.00047   20.0   0.0    1.5  1  Methyltransf_23  Methyltransferase domain
  ------ inclusion threshold ------
       0.02   14.7   0.1       0.14   11.9   0.1    2.1  1  Methyltransf_31  Methyltransferase domain
       0.17   12.7   0.3          2    9.2   0.3    2.3  1  Methyltransf_12  Methyltransferase domain


Domain annotation for each model (and alignments):
>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.8   0.0     3e-13   1.1e-09       2      96 .]      53     141 ..      52     141 .. 0.90

  Alignments for each domain:
  == domain 1  score: 38.8 bits;  conditional E-value: 3e-13
                      EET-TTSHHHHHHHHTTSEEEEEES-HHHHHHHHHHCCHHT-EEEETTEECCCTSS-TT-EEEEEEES-CCC-...CCHHHHHHHHHHHEEEEE CS
  Methyltransf_11   2 dvGcGtGrlaealakrgarvvgvDlskemlklakekaseeglkvefvvadaeklpfednsfDlvvssevlhhv...edpekalkeiaRvLkpgG 92 
                      d+GcG+G++++   + +  ++g D +++++++  + ++       +vvad  ++p + +  D+ +s  v+hh+   e++ +a++e+ Rv+++gG
       EPX70636.1  53 DIGCGNGKYQKVNPNIY--LIGSDRCEKLVQIGYKLGP-------MVVADGLHVPHPTDRSDFALSIAVIHHFsneERRLQAVQEVLRVVRKGG 137
                      9************9665..***********77744443.......49**************************9988999************** PP

                      EEEE CS
  Methyltransf_11  93 llvi 96 
                      + ++
       EPX70636.1 138 KALF 141
                      9875 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   0.0   8.1e-10   2.9e-06       3      97 .]      53     137 ..      52     137 .. 0.87

  Alignments for each domain:
  == domain 1  score: 27.9 bits;  conditional E-value: 8.1e-10
                      EET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTTTEEEEESBCCGBSSSTTTEEEEEEESTGGGSSHHH.HHHHHHHHHHHEEE CS
  Methyltransf_25   3 dlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeeglnvefvqgdaedlpfedgsfDlvvssgalhhlsded.lekalkeiarvLkp 95 
                      d+GcG+G++ +      ++  ++g D  e+++++  +          +v++d  ++p + ++ D+ +s+ ++hh+s+e+ + +a++e+ rv+++
       EPX70636.1  53 DIGCGNGKYQKV-N---PNIYLIGSDRCEKLVQIGYKLG-------PMVVADGLHVPHPTDRSDFALSIAVIHHFSNEErRLQAVQEVLRVVRK 135
                      9******87443.3...3478*************99998.......69********************877***877661569*********** PP

                      EE CS
  Methyltransf_25  96 gG 97 
                      gG
       EPX70636.1 136 GG 137
                      *9 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   1.3e-07   0.00047      12     160 ..      37     215 ..      26     220 .. 0.63

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 1.3e-07
  Methyltransf_23  12 klerllpklraggrvLdiGcGtGil..............levlrengf...svtgvDlspeaveiaekakkaqkdqfdeqeaaepqgkfdlIvl 88 
                       +er+l  l+ g+   diGcG G                +e l + g+    +++ D               +++         p ++ d++ +
       EPX70636.1  37 VVERFLNSLPVGAVGFDIGCGNGKYqkvnpniyligsdrCEKLVQIGYklgPMVVADGL------------HVPH---------PTDRSDFALS 109
                      578888889999999********654555555555555555554555444455555553............2344.........66******** PP

  Methyltransf_23  89 revlehvpdppellrqiat...llkpgGylllseplasl..............................kedrllldwlyl..........vpa 139
                      + v++h+ + ++ l+ +++    ++ gG +l+ +++ ++                              k          +          + a
       EPX70636.1 110 IAVIHHFSNEERRLQAVQEvlrVVRKGGKALFFVWALEQrnsrrgfsengpqdvhvpwvlkrqyeypnaK----------PeelkghhpdeNVA 193
                      *********88777766662226669********988875555555555555544444444444333321..........03333333222333 PP

  Methyltransf_23 140 g.rhisffsarslkelleeaGl 160
                        r  ++f   +l el+++aG 
       EPX70636.1 194 YqRYYHLFKKGELSELVQKAGG 215
                      3355599999999999999985 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1     4e-05      0.14       9     107 ..      53     139 ..      48     214 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 4e-05
  Methyltransf_31   9 DlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaqklgldnveFeqgdieeleklledekfDlilsnevlnaladpdkile...eier 99 
                      D+GCG+G++     ++++p++ ++G D+ e+ ++   +    lg     + ++d  + +     ++ D+ ls +v++++++ +  l+   e+ r
       EPX70636.1  53 DIGCGNGKY-----QKVNPNIYLIGSDRCEKLVQIGYK----LGP----MVVADGLHVP--HPTDRSDFALSIAVIHHFSNEERRLQavqEVLR 131
                      9*****995.....6999***************98776....455....6888989988..456899999999999999999988886668888 PP

  Methyltransf_31 100 vlkpggil 107
                      v+++gg  
       EPX70636.1 132 VVRKGGKA 139
                      88888865 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.3   0.00056         2      63      98 ..     100     138 ..      52     139 .. 0.66

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00056
  Methyltransf_12  63 ggssfDlvvasnvlhhl..kdir.evldnirklLkpgGr 98 
                      + +  D  +++ v+hh+  +++r ++++++ +++++gG+
       EPX70636.1 100 PTDRSDFALSIAVIHHFsnEERRlQAVQEVLRVVRKGGK 138
                      3358899**********9955555999999999999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (234 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       476  (0.0265492); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 1582.66
//
Query:       EPX70637.1  [L=526]
Description: substrate adaptors for Cullin 3 ubiquitin ligase Btb3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.7e-25   88.7   1.2    1.5e-13   50.9   0.1    2.5  2  BTB              BTB/POZ domain
    1.7e-07   31.7   0.0    5.6e-07   30.1   0.0    1.9  1  Ank_2            Ankyrin repeats (3 copies)
    1.6e-06   28.0   1.1      0.034   14.7   0.0    3.6  4  Ank_3            Ankyrin repeat
    2.5e-06   27.9   0.0    1.9e-05   25.1   0.0    2.5  3  Ank_4            Ankyrin repeats (many copies)
    2.6e-05   24.4   0.0      0.075   13.4   0.0    2.6  2  Ank_5            Ankyrin repeats (many copies)
      0.002   18.5   0.0       0.04   14.4   0.0    2.9  2  Ank              Ankyrin repeat
     0.0046   17.0   0.0      0.018   15.1   0.0    2.1  1  BACK             BTB And C-terminal Kelch
  ------ inclusion threshold ------
       0.06   13.4   0.0       0.12   12.4   0.0    1.5  1  TetR_C_27        Tetracyclin repressor-like, C-terminal domai
      0.091   12.8   0.0        5.2    7.1   0.0    2.5  2  Coatomer_b_Cpla  Coatomer beta subunit appendage platform


Domain annotation for each model (and alignments):
>> BTB  BTB/POZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.2   0.1   2.9e-12   5.8e-09       9     101 ..     168     254 ..     160     262 .. 0.86
   2 !   50.9   0.1   7.6e-17   1.5e-13       5      97 ..     303     392 ..     299     405 .. 0.86

  Alignments for each domain:
  == domain 1  score: 36.2 bits;  conditional E-value: 2.9e-12
                 TTS-EEEEETTTEEEEE-HHHHHHH-HHHHHHHTSTTTTTCCCEEEEETTSGHHHHHHHHHHHHHSEEEC-CGGGHHHHHHHHHHHT-HHHHH CS
         BTB   9 elcDvtlvvgdgkefkahkavLaarSpyFkalftskeieessvseielddvepeafealLefiYtgeleitseenleelLaaadllqiprlkk 101
                   +Dvt+      +++ h+++La+rSpyF++ f +  ++ess   i++ + + +++e +L+f+Y +  ++ s++++ +l ++a+++ + + ++
  EPX70637.1 168 FTSDVTFSGS-SISLPGHRFYLASRSPYFREKFLKL-KDESS---IPI-KRNEKELETVLRFLYLDYHPLFSKQDASALVSIAKKFSLTDFVN 254
                 579*******.7***********************9.55655...664.457789***********9999999*************9988765 PP

  == domain 2  score: 50.9 bits;  conditional E-value: 7.6e-17
                 HHHTTTS-EEEEETTTEEEEE-HHHHHHH-HHHHHHHTST.TTTTCCCEEEEETTSGHHHHHHHHHHHHHSEEEC-CGGGHHHHHHHHHHHT-H CS
         BTB   5 resgelcDvtlvvgdgkefkahkavLaarSpyFkalftsk.eieessvseielddvepeafealLefiYtgeleitseenleelLaaadllqip 97 
                  ++ ++ D+ l+ + ++++++h+a+L+ rS+yF ++ft+   + ++s  +++l+ ++ e++e++Lef+Y+++ +i+    + +++++ad+l ++
  EPX70637.1 303 PHQCSFHDAYLQSE-THRYPVHRAILC-RSEYFMDMFTGPfLEGNQSLPTVTLP-FSNEIVEIVLEFLYSDKADIP-AFLALDVIYVADMLSLD 392
                 56679*********.7**********7.9***********64455666699865.678*****************9.89999*******99887 PP

>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.1   0.0   2.8e-10   5.6e-07       3      73 ..      61     139 ..      59     148 .. 0.55

  Alignments for each domain:
  == domain 1  score: 30.1 bits;  conditional E-value: 2.8e-10
       Ank_2   3 lAakngnlelvklLlegadpn....k.ngktaLhyAakngnleivklLleh.....ad.ndgrtpLhyAarsghleivklLl 73 
                  A++ g+le+v+ ++e++++     + ++ ++L +A   g++e+vk+Lle+      d  +g+  L+ A  ++h  i k+Ll
  EPX70637.1  61 EACRRGDLEVVRSMIENYNVPinqvDiFDYSPLVLASLCGHEEVVKYLLENgaiceRDtFQGERCLYGAL-NDH--IRKMLL 139
                 5666666667777764433322233256667777777777666677777655553333444666666666.554..666666 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.0   0.00049      0.98       8      30 ..      61      83 ..      59      84 .. 0.94
   2 !   14.7   0.0   1.7e-05     0.034       3      27 ..      90     113 ..      88     116 .. 0.91
   3 ?   -3.5   0.0         9   1.8e+04      15      29 ..     283     295 ..     280     296 .. 0.73
   4 ?   -3.6   0.0         9   1.8e+04       3      12 ..     319     328 ..     318     330 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00049
       Ank_3  8 lAarsgnleivkfLlenkgadvn 30
                +A+r g+le+v+ ++en+++++n
  EPX70637.1 61 EACRRGDLEVVRSMIENYNVPIN 83
                69*******************99 PP

  == domain 2  score: 14.7 bits;  conditional E-value: 1.7e-05
       Ank_3   3 etpLhlAarsgnleivkfLlenkga 27 
                 ++pL lA ++g+ e+vk+Lle +ga
  EPX70637.1  90 YSPLVLASLCGHEEVVKYLLE-NGA 113
                 79*******************.676 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 9
       Ank_3  15 leivkfLlenkgadv 29 
                 +  +k +++n+  ++
  EPX70637.1 283 F--IKEIIQNYKQNI 295
                 4..899999887665 PP

  == domain 4  score: -3.6 bits;  conditional E-value: 9
       Ank_3   3 etpLhlAars 12 
                 ++p h+A+++
  EPX70637.1 319 RYPVHRAILC 328
                 7899999876 PP

>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.0   9.6e-09   1.9e-05       5      55 .]      59     109 ..      57     109 .. 0.95
   2 ?   -1.5   0.0       2.2   4.3e+03      28      44 ..     312     327 ..     306     331 .. 0.74
   3 ?   -3.2   0.0       7.1   1.4e+04      17      29 ..     364     376 ..     363     377 .. 0.82

  Alignments for each domain:
  == domain 1  score: 25.1 bits;  conditional E-value: 9.6e-09
       Ank_4   5 LhyaaisgrlelvrlLlek.gadinaqdnrsGetalhiAakrgnveilklLl 55 
                 L  a+  g+le+vr+ +e+ ++ in + ++ + ++l  A + g+ e++k+Ll
  EPX70637.1  59 LCEACRRGDLEVVRSMIENyNVPINQV-DIFDYSPLVLASLCGHEEVVKYLL 109
                 667999***********988*******.***********************8 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 2.2
       Ank_4  28 naqdnrsGetalhiAak 44 
                 + q ++ ++ ++h+A++
  EPX70637.1 312 YLQ-SETHRYPVHRAIL 327
                 555.6667889***996 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 7.1
       Ank_4  17 vrlLlekgadina 29 
                 +++L++ +adi a
  EPX70637.1 364 LEFLYSDKADIPA 376
                 7899999**9975 PP

>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.0   0.00026      0.51      20      49 ..      59      89 ..      49      92 .. 0.85
   2 !   13.4   0.0   3.8e-05     0.075      12      46 ..      85     119 ..      82     124 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00026
       Ank_5 20 LhvAakygaadvvrlLl.argadlnltdsrG 49
                L+ A+++g ++vvr ++ ++++ +n+ d   
  EPX70637.1 59 LCEACRRGDLEVVRSMIeNYNVPINQVDIFD 89
                667***********************99765 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 3.8e-05
       Ank_5  12 ldgggntpLhvAakygaadvvrlLlargadlnltd 46 
                  d + ++pL +A+ +g+ +vv++Ll++ga +   +
  EPX70637.1  85 VDIFDYSPLVLASLCGHEEVVKYLLENGAICERDT 119
                 566678*******************9998665555 PP

>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.63   1.3e+03       9      31 ..      62      86 ..      59      87 .. 0.77
   2 !   14.4   0.0     2e-05      0.04       3      27 ..      90     114 ..      89     119 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.63
                HHHHTTHHHHHHHH.T.TTSTTCBT CS
         Ank  9 AatngkkriiklLL.h.GAnlnald 31
                A+++g++++++  + +    +n++d
  EPX70637.1 62 ACRRGDLEVVRSMIeNyNVPINQVD 86
                899********99964245578777 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 2e-05
                 BBHHHHHHHHTTHHHHHHHH.TTTST CS
         Ank   3 nTPLHlAatngkkriiklLL.hGAnl 27 
                 ++PL lA+ +g+++++k+LL +GA +
  EPX70637.1  90 YSPLVLASLCGHEEVVKYLLeNGA-I 114
                 79******************9998.4 PP

>> BACK  BTB And C-terminal Kelch
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0     9e-06     0.018       4      53 ..     418     467 ..     415     472 .. 0.90

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 9e-06
        BACK   4 ilefAeaysceeLaeaakefilknfeevlkseeFleLskeqllellssde 53 
                 il+ A   s  +L+++a e++ +n+e+++ + eF eL  e+   +l++ e
  EPX70637.1 418 ILRTAWDTSTLRLEQYASEYMANNLEKIIDDPEFHELVIESADRILHRQE 467
                 777888889999****************************9999999876 PP

>> TetR_C_27  Tetracyclin repressor-like, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   6.2e-05      0.12       4      39 ..     429     464 ..     426     477 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 6.2e-05
                 HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-HH CS
   TetR_C_27   4 rLrewlaalfeakrrkarddpelFatyvvlieeele 39 
                 rL++++++ ++  ++k+ ddpe+++++++ +++ l+
  EPX70637.1 429 RLEQYASEYMANNLEKIIDDPEFHELVIESADRILH 464
                 9***************************99887665 PP

>> Coatomer_b_Cpla  Coatomer beta subunit appendage platform
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0     0.049        98      27      58 ..     194     225 ..     188     235 .. 0.90
   2 ?    7.1   0.0    0.0026       5.2      16      87 ..     251     317 ..     236     319 .. 0.79

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.049
  Coatomer_b_Cpla  27 eFremWaefeWEnkiavktkltdlkeyleelv 58 
                       Fre+  +++ E  i +k + ++l+++l++l 
       EPX70637.1 194 YFREKFLKLKDESSIPIKRNEKELETVLRFLY 225
                      6*************************999875 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0026
  Coatomer_b_Cpla  16 dyikpakiseeeFremWaefeWEnkiavktkltdlkeyleelvkktnmklltpeeeleeeaeflsanlyaks 87 
                      d++++ + + e+ r+     +W +   v+t+ +d+ ++++e++++ + ++ +p e+l ++++f  a l +++
       EPX70637.1 251 DFVNCFQNNPEQMRS----PDWRKGQLVQTQ-EDMGRFIKEIIQNYKQNISEPIENLPHQCSFHDAYLQSET 317
                      555555555555554....478888788877.89****************************9988887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (526 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       790  (0.0440627); expected 358.6 (0.02)
Passed bias filter:                      627  (0.0349713); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.60u 0.28s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 3658.35
//
Query:       EPX70638.1  [L=234]
Description: tubulin specific chaperone cofactor B [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.7e-24   83.2   0.1    1.4e-23   82.6   0.1    1.2  1  CAP_GLY      CAP-Gly domain
    2.9e-10   40.5   0.1    4.7e-10   39.8   0.1    1.4  1  Ubiquitin_2  Ubiquitin-like domain


Domain annotation for each model (and alignments):
>> CAP_GLY  CAP-Gly domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.6   0.1   1.6e-27   1.4e-23       2      65 .]     155     220 ..     154     220 .. 0.90

  Alignments for each domain:
  == domain 1  score: 82.6 bits;  conditional E-value: 1.6e-27
     CAP_GLY   2 gdrvklkegrrGvvryvGpvp..fakgewvGveldepnGkndGsvkgkrYFeckpnrGvFvrpekv 65 
                 ++r+  +++r+G++ry+G vp  ++++ w+Gve+dep+GkndGs++gkrYF++++++G+F++p++v
  EPX70638.1 155 NSRCCASGERYGTIRYIGYVPeiSKNSLWIGVEFDEPVGKNDGSIQGKRYFTTRNKHGSFLKPTDV 220
                 578766799***********96666668**********************************9876 PP

>> Ubiquitin_2  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.8   0.1   5.3e-14   4.7e-10       2      85 ..       4      86 ..       3      88 .. 0.91

  Alignments for each domain:
  == domain 1  score: 39.8 bits;  conditional E-value: 5.3e-14
                 EEEEEEETTSS.SEEEEEEETTSBHHHHHHHHHHHH---TTCEEEEEE.-SSSSEEECS..SGCCSBCCCCT--TTEEEEEEE-TT CS
  Ubiquitin_2  2 vkleitssltkavsserrfsksltieelKekLelitGtspasmrLqlyddkkdnevskl..ddddalLgsYgvkdgmrihViDkdp 85
                 + +++ ss +    s+r++++++t+++lK+kL +i G++  ++++++ ++++ ++ +++  ++++  L+   +++ ++  ++D++p
   EPX70638.1  4 IYVNVRSSGI---RSDRKINLHWTLSQLKTKLVPIIGIPEIYQKIKYEPASSTSQSHTFtsEEENDILSHHDIEELSTFIIEDTRP 86
                 6688999999...8*********************************98888888888887889999****************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (234 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       605  (0.0337442); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1784.09
//
Query:       EPX70639.1  [L=321]
Description: ribonuclease H2 complex subunit Rnh201 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.2e-64  216.0   0.0    5.4e-64  215.7   0.0    1.1  1  RNase_HII  Ribonuclease HII
  ------ inclusion threshold ------
       0.12   12.6   0.0       0.21   11.8   0.0    1.4  1  DUF1874    Domain of unknown function (DUF1874)


Domain annotation for each model (and alignments):
>> RNase_HII  Ribonuclease HII
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  215.7   0.0     6e-68   5.4e-64       1     197 [.      60     270 ..      60     271 .. 0.99

  Alignments for each domain:
  == domain 1  score: 215.7 bits;  conditional E-value: 6e-68
                 EEEEEE-TT-SBS-EEEEEEEECGHHHHHHHCTTGTTGTTS-HHHHHHHHHHHH..............SEEEEEEE-HHHHH.HHTTTS-HHHHHHHHH CS
   RNase_HII   1 iGiDEaGrGpvlGplvvaavavekereeelkklgvkDSKkLskqkreeLaklik..............kkiekrklvaeeikyaseneinlneikaalt 85 
                 +G+DEaGrGpvlGp+v+a+++++ + +  l++ g++DSK+L+  kr++L + i+              ++i++++l a++++  + n++nln++++++t
  EPX70639.1  60 LGVDEAGRGPVLGPMVYAVAYCPVDFD--LTNFGFADSKTLTAVKRSQLLEDICntetelgrhvgwsvQSISAKELGAGMLR--KYNKYNLNSQAHDTT 154
                 6**************************..9*************************************************999..67************* PP

                 HHHHHHHHHTCEECCECCCE--SSHHHHHHHHHHHHC.CEEEEETTGGGT-HHHHHHHHHHHHHHHHHHHHHHHHCSH.--TTSSTTSHHHHHHHHHHH CS
   RNase_HII  86 laviklleklgvkvdeilvdgvttpeslkkkleqiik.ikvtvekkadekyllvaaASiiAkverdeelellkrkpgtldkgsGyasdektrallkkga 183
                 + +i++++ +g+++ ei+vd+v++pe +++kl+++++ +kv v+kkad+++++v++ASi+Akv+rd++lel +   +t d+gsGy+sd++t+++l++ +
  EPX70639.1 155 MSLIQKVYDSGIQIREIYVDTVGPPETYQQKLQARFPqAKVKVTKKADSLFPIVSLASICAKVTRDVQLELVRYLLQTQDWGSGYSSDARTTKWLRSSV 253
                 *************************************************************************************************** PP

                 HH...S--TTB-TTSHH CS
   RNase_HII 184 ts...klpdivrlsfkt 197
                 ++   ++ divr+s++t
  EPX70639.1 254 QPvfgWKGDIVRYSWQT 270
                 ***************98 PP

>> DUF1874  Domain of unknown function (DUF1874)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.3e-05      0.21      15      89 ..     121     196 ..     105     204 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.3e-05
                 ......EEEEEEE-HH.HHHSSTTEEE----HHHHHHHHHHHT-----------B-TT-EEEEEEE---------- CS
     DUF1874  15 glykiekitieeakel.lkenneefvsaiGHeataellselldveikvnRieiklekgdkaivlklkeRleEgkvl 89 
                   +++++i+++e+    l+++n+   ++  H+ t++l++++ d  i+   i +      + +  kl++R++  kv 
  EPX70639.1 121 VGWSVQSISAKELGAGmLRKYNKYNLNSQAHDTTMSLIQKVYDSGIQIREIYVDTVGPPETYQQKLQARFPQAKVK 196
                 5688999999998765499999999****************************99999999********9999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       507  (0.0282782); expected 358.6 (0.02)
Passed bias filter:                      445  (0.0248201); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.21s 00:00:00.65 Elapsed: 00:00:00.35
# Mc/sec: 2743.39
//
Query:       EPX70640.1  [L=220]
Description: adenylate kinase Adk1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.3e-60  201.3   0.0      1e-59  201.0   0.0    1.0  1  ADK              Adenylate kinase
    5.2e-25   88.5   0.0      9e-25   87.7   0.0    1.4  1  AAA_17           AAA domain
    2.4e-18   65.8   0.0    5.3e-18   64.7   0.0    1.6  1  ADK_lid          Adenylate kinase, active site lid
    3.8e-06   27.5   0.0    1.4e-05   25.7   0.0    1.9  2  AAA_18           AAA domain
    3.2e-05   24.1   0.0    8.2e-05   22.8   0.0    1.6  2  AAA_33           AAA domain
  ------ inclusion threshold ------
      0.014   15.6   0.1      0.032   14.5   0.0    1.6  2  Hydin_ADK        Hydin Adenylate kinase-like domain
      0.024   14.3   0.1        2.5    7.7   0.0    2.3  2  Thymidylate_kin  Thymidylate kinase
      0.027   14.2   0.0      0.034   13.9   0.0    1.4  1  Cytidylate_kin   Cytidylate kinase


Domain annotation for each model (and alignments):
>> ADK  Adenylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  201.0   0.0   4.5e-63     1e-59       1     150 [.       8     194 ..       8     195 .. 0.98

  Alignments for each domain:
  == domain 1  score: 201.0 bits;  conditional E-value: 4.5e-63
                 EEESTTSSHHHHHHHHHHHHTSEEEEHHHHHHHHHHCT-HHHHHHHHHHHTTSS--HHHHHHHHHHHHHCH.GTTTEEEEESB-SSHHHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         ADK   1 llGaPgaGKGtqaeklvkkyglahlstGdllRaevksgtelGkeakevmdkgelvpdevvvklvkeeleke.dkkkgfllDGfPRtveqaealeellee 98 
                 l+G+PgaGKGtqa++++kkyg+ahl+tGd+lR++v++gt+lGkeak++md+g lv+d++v +++++e+ ++ ++k+gf+lDGfPRtv qae+l ell++
  EPX70640.1   8 LVGPPGAGKGTQAPNIQKKYGIAHLATGDMLRSQVARGTDLGKEAKQIMDQGGLVSDDIVAGMIRDEFLNNpACKNGFILDGFPRTVVQAEKLSELLKD 106
                 79***************************************************************9977776*************************** PP

                 HTSEESEEEEEE--HHHHHHHHHT....................................GSHHHHHHHHHHHHHHHHHHHHHHHHTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxx....................................xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         ADK  99 ekvkldlvleldvpeevlveRltg....................................DneetvkkRletykkqtkplidyykkkg 150
                  k +l++vlel+v++e+lv+R+tg                                    Dn+++++kRl ty++qt+p++dy+kk++
  EPX70640.1 107 LKLELNAVLELQVDDELLVRRITGrlvhpasgrsyhtefnppkvpmkddvtgeplvqrsdDNADALRKRLVTYHSQTTPVVDYFKKEN 194
                 *************************************************************************************986 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.7   0.0     4e-28     9e-25       1     130 [.       9     142 ..       9     145 .. 0.86

  Alignments for each domain:
  == domain 1  score: 87.7 bits;  conditional E-value: 4e-28
                 EE-TTSSHHHHHHHHHHHHTEEEEEHHHHHHHHHHTT.TS.HSSHHHHCTSHHHHHHHHHHHHHHHHHHH.HHSSEEEEEE-SEEEETTEEEESSHHHH CS
      AAA_17   1 lGgPGsGKgtqceklvekygfthlsaGdllreeakrg.gl.akardemrklpleekkelqkeaaekiaee.akkkgvlvdghprikeqagfldglpkev 96 
                 +G+PG+GKgtq+ ++++kyg+ hl +Gd+lr+ ++rg  l ++a++ m+++ l+ ++ +  ++ ++  ++ a+k+g+++dg+pr+  qa+ l++l k+ 
  EPX70640.1   9 VGPPGAGKGTQAPNIQKKYGIAHLATGDMLRSQVARGtDLgKEAKQIMDQGGLVSDDIVAGMIRDEFLNNpACKNGFILDGFPRTVVQAEKLSELLKDL 107
                 7******************************98888845746666667799*************9998873599***********************87 PP

                 HHHH..SEEEEEE--HHHHHHHHHHH...TTST-TS- CS
      AAA_17  97 leelkpdaiilleadpeeilerrlkd...rtrgrddd 130
                   +l+ +a++ l++d+e +++r   +     +gr++ 
  EPX70640.1 108 --KLELNAVLELQVDDELLVRRITGRlvhPASGRSYH 142
                 ..5566***********99999877764246888765 PP

>> ADK_lid  Adenylate kinase, active site lid
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.7   0.0   2.4e-21   5.3e-18       1      36 []     131     166 ..     131     166 .. 0.99

  Alignments for each domain:
  == domain 1  score: 64.7 bits;  conditional E-value: 2.4e-21
                 EEE-TTT--EEETTTB--SSTTB-TTT--.-B--GG CS
     ADK_lid   1 RrvCpkCGrsYhvvfnpPkveglCDkCGepLvqRsD 36 
                 R+v+p++GrsYh +fnpPkv++++D++GepLvqRsD
  EPX70640.1 131 RLVHPASGRSYHTEFNPPKVPMKDDVTGEPLVQRSD 166
                 9***********99*********************9 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.0   6.1e-09   1.4e-05       1     119 [.       6     137 ..       6     146 .. 0.69
   2 ?   -2.1   0.0       2.4   5.3e+03      16      38 ..     170     196 ..     167     216 .. 0.63

  Alignments for each domain:
  == domain 1  score: 25.7 bits;  conditional E-value: 6.1e-09
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf.....gvnlrd.vakenglllevdpealdeskrldedkldklldaleenssaleegknlvidghlaeleseaakd 93 
                 I+l G+pG+GK t a +++k+ g+     g+ lr+ va+  +l  e  + + +  ++ d+ +   + d++ +n++     +  ++dg++   ++++   
  EPX70640.1   6 IILVGPPGAGKGTQAPNIQKKYGIahlatGDMLRSqVARGTDLGKEAKQIMDQGGLVSDDIVAGMIRDEFLNNPA---CKNGFILDGFPRTVVQAEKLS 101
                 9********************877966664444331333333333333335556666666666667777777765...344569***997666443332 PP

      AAA_18  94 ikk..........vvLtaspeelleRlekRgyeeak 119
                                L++++e l +R+  R  ++a 
  EPX70640.1 102 ELLkdlklelnavLELQVDDELLVRRITGRLVHPAS 137
                 22245666****99****************988765 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 2.4
      AAA_18  16 keLskrl.gf...gvnlrdvakengll 38 
                 ++L+krl  +    + + d++k+++  
  EPX70640.1 170 DALRKRLvTYhsqTTPVVDYFKKENKW 196
                 567777655566666666776666544 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.0   3.6e-08   8.2e-05       2     119 ..       6     132 ..       6     144 .. 0.74
   2 ?   -2.4   0.0       2.2     5e+03      52      52 ..     193     193 ..     167     217 .. 0.45

  Alignments for each domain:
  == domain 1  score: 22.8 bits;  conditional E-value: 3.6e-08
      AAA_33   2 vllvGlpGsGKstlaerllkklgavllssdtlrr.rlfg.....tdqqsktdytr.vldr.lyqilnelarkalsagrnvildatnlsrrerarflkla 92 
                 ++lvG+pG+GK t a ++ kk g  +l++ +++r +++      ++ +++ d+   v+d+ + +++++ +  + + ++++ild   ++  + +++ +l+
  EPX70640.1   6 IILVGPPGAGKGTQAPNIQKKYGIAHLATGDMLRsQVARgtdlgKEAKQIMDQGGlVSDDiVAGMIRDEFLNNPACKNGFILDGFPRTVVQAEKLSELL 104
                 699********************888777665552666566544333344344433555556667777777889999*****98777777777777777 PP

      AAA_33  93 rrlgvpv.rivvvetdeetlkeRlakRa 119
                 ++l+ +  +++ +++d+e+l +R+  R 
  EPX70640.1 105 KDLKLELnAVLELQVDDELLVRRITGRL 132
                 777777626689************9995 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 2.2
      AAA_33  52 l 52 
                 +
  EPX70640.1 193 E 193
                 1 PP

>> Hydin_ADK  Hydin Adenylate kinase-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   1.4e-05     0.032       2      40 ..       6      44 ..       5      60 .. 0.83
   2 ?   -2.9   0.0         3   6.7e+03     181     197 ..      73      89 ..      57      90 .. 0.70

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 1.4e-05
   Hydin_ADK  2 iivhGaPlsGKtatavtLakkYeaAlltiDsvvleAisd 40
                ii+ G+P +GK + a ++ kkY++A l+  +++   ++ 
  EPX70640.1  6 IILVGPPGAGKGTQAPNIQKKYGIAHLATGDMLRSQVAR 44
                8999***********************988887776665 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 3
   Hydin_ADK 181 sERlqlndCyrGvvfDg 197
                  E l+   C  G ++Dg
  EPX70640.1  73 DEFLNNPACKNGFILDG 89 
                 45666678999999999 PP

>> Thymidylate_kin  Thymidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.0    0.0011       2.5       3      57 ..      10      67 ..       9      73 .. 0.84
   2 ?    4.4   0.0     0.012        27     144     185 .]     171     212 ..     143     212 .. 0.72

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0011
                     ESTTSSHHHHHHHHHHHHHHTTE....EEEESSSTTSHHHHHHHHHHHTCS---HHHH CS
  Thymidylate_kin  3 GlDGaGKttqaellkerlkeegik...vvltrepggteiGekirelllkeeeleeqte 57
                     G  GaGK tqa ++ +++  ++++   +++++  +gt++G+ +++++ +   +++  +
       EPX70640.1 10 GPPGAGKGTQAPNIQKKYGIAHLAtgdMLRSQVARGTDLGKEAKQIMDQGGLVSDDIV 67
                     5669*************988777667899999*************9987777776655 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.012
                      SHHHHHHHHHHHHHHHHHHHHTTSTEEEEETTS-HHHHHHHH CS
  Thymidylate_kin 144 eeeeqldflrkvrerylelakederiliidasksieevheeI 185
                      +  ++l ++++ ++   + +k++++++ i+a+++ e+v ++I
       EPX70640.1 171 ALRKRLVTYHSQTTPVVDYFKKENKWHCIEAAQKPEQVWQQI 212
                      444555555555566778888889999999999999999987 PP

>> Cytidylate_kin  Cytidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   1.5e-05     0.034       3      35 ..       8      40 ..       6     136 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.5e-05
                    EE-STTSSHHHHHHHHHHHHT-EEEEHHHHHHH CS
  Cytidylate_kin  3 iDGPagsGKssvaralaeklglkyldtgalYRa 35
                    + GP g+GK++ a  + +k g++ l tg + R 
      EPX70640.1  8 LVGPPGAGKGTQAPNIQKKYGIAHLATGDMLRS 40
                    66****************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       527  (0.0293937); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 1714.77
//
Query:       EPX70641.1  [L=617]
Description: cleavage and polyadenylation specificity factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-05   24.1   0.0    0.00016   22.4   0.0    1.9  1  CTD_bind    RNA polymerase II-binding domain.
     0.0051   16.7   0.0      0.016   15.0   0.0    1.9  1  VHS         VHS domain
     0.0056   17.1   4.0     0.0066   16.9   0.7    2.3  2  CFIA_Pcf11  Subunit of cleavage factor IA Pcf11
  ------ inclusion threshold ------
        5.5    7.0  10.1        9.2    6.3   0.3    3.5  3  zf-C2HC_2   zinc-finger of a C2HC-type


Domain annotation for each model (and alignments):
>> CTD_bind  RNA polymerase II-binding domain.
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.0   3.5e-08   0.00016       1      60 [.      56     111 ..      56     112 .. 0.94

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 3.5e-08
    CTD_bind   1 kLnllYLaNdvlqnskrkqkdefapaFapvlpeafadaykkapekikkklkrllniWeer 60 
                 kL+ lYL++++ +n        ++  F+++l ++f +ay   +++++ kl +ll  W++r
  EPX70641.1  56 KLPALYLLDSISKNI----GYPYTLFFGRHLFTTFMNAYTVVEPSLRLKLDQLLGTWKQR 111
                 89************7....2789999**************88999**************9 PP

>> VHS  VHS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   3.6e-06     0.016      29      99 ..      24      95 ..      12     121 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 3.6e-06
                HHHHHHHCS.TCHHHHHHHHHHHHHT-SSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHHCTT CS
         VHS 29 eicDlinek.eagpkeavrlikkkinsknphvallaLklldalvkNcGskfhleiaskeflnelvklilekk 99
                  + ++ ++ e  +  +v++++k i++  p   l aL lld++ kN G++  l +++  f+  + + +  ++
  EPX70641.1 24 HTLTYVAQEnEPYALSVVNALEKHIQKCPPSSKLPALYLLDSISKNIGYPYTLFFGRHLFTTFMNAYTVVEP 95
                55556666657789999**********************************999999988876666444444 PP

>> CFIA_Pcf11  Subunit of cleavage factor IA Pcf11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.7   1.5e-06    0.0066       2      47 ..     433     478 ..     432     488 .. 0.76
   2 ?    0.5   0.1       0.2     9e+02      33      54 ..     541     562 ..     526     590 .. 0.58

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 1.5e-06
                 XXXXXXXXXXBXBXXXXXHHHHHTXXTHHCHXXXXXXXXXXXXXXX CS
  CFIA_Pcf11   2 kkttttakniQsRnWYLddsqWvkfkddeivstksssnktskkask 47 
                 k++ +++ +  +R W++ +++W++ +++e++ t+++ + +++k+++
  EPX70641.1 433 KRIRESSLHGINRCWFITEEEWIQNDEKEDLVTETAAELEEQKQKQ 478
                 667777778889***************9998888777666555544 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.2
                 XXXXXXXXXXXXXXXXXXXXXX CS
  CFIA_Pcf11  33 stksssnktskkasknaatqas 54 
                 +tk+s++++s+++s  + ++++
  EPX70641.1 541 QTKNSKDSSSTTTSHVQPSSDN 562
                 2333333333333333332222 PP

>> zf-C2HC_2  zinc-finger of a C2HC-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.2     0.025   1.1e+02      15      24 ..      42      51 ..      41      52 .. 0.89
   2 ?    6.3   0.3    0.0021       9.2       4      13 ..     403     412 ..     402     415 .. 0.85
   3 ?    2.5   0.6     0.031   1.4e+02       3      13 ..     498     508 ..     498     510 .. 0.86

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.025
   zf-C2HC_2 15 drlekHepvC 24
                 +lekH+ +C
  EPX70641.1 42 NALEKHIQKC 51
                589******* PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0021
   zf-C2HC_2   4 pCpkCgRsFn 13 
                 +C +CgR+++
  EPX70641.1 403 QCANCGRRYA 412
                 9******987 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.031
   zf-C2HC_2   3 vpCpkCgRsFn 13 
                 +pCp C  +F 
  EPX70641.1 498 QPCPVCQEKFR 508
                 59****99996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (617 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       961  (0.0536003); expected 358.6 (0.02)
Passed bias filter:                      614  (0.0342462); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.39
# Mc/sec: 4688.76
//
Query:       EPX70642.1  [L=568]
Description: meiotic PUF family protein 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-39  130.4  12.9    7.5e-07   28.5   0.2    8.4  9  PUF       Pumilio-family RNA binding repeat
    1.3e-06   28.8   1.4      0.021   15.1   0.2    3.8  4  CPL       CPL (NUC119) domain
     0.0041   17.8   3.1       0.31   11.8   0.3    3.5  3  Bcl-2     Apoptosis regulator proteins, Bcl-2 family
  ------ inclusion threshold ------
      0.016   14.9   0.0      0.044   13.5   0.0    1.7  1  UTP15_C   UTP15 C terminal
      0.064   13.6   0.8       0.32   11.3   0.4    2.4  2  YnfE      Uncharacterized YnfE-like
          1    9.9   5.3        1.1    9.7   2.1    2.5  2  DUF16     Protein of unknown function DUF16


Domain annotation for each model (and alignments):
>> PUF  Pumilio-family RNA binding repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1      0.98   2.9e+03      23      34 ..      38      49 ..      38      50 .. 0.88
   2 ?   -1.9   0.0       1.1   3.3e+03      11      29 ..     252     270 ..     252     275 .. 0.77
   3 !   28.5   0.2   2.5e-10   7.5e-07       2      31 ..     279     308 ..     279     309 .. 0.92
   4 !   23.3   0.0   1.2e-08   3.4e-05       5      33 ..     318     346 ..     315     348 .. 0.87
   5 ?    2.6   0.0     0.043   1.3e+02      13      25 ..     362     374 ..     360     378 .. 0.84
   6 !   19.3   0.0   2.1e-07   0.00064       2      35 .]     391     424 ..     390     424 .. 0.93
   7 !   25.7   0.0     2e-09   5.9e-06       1      32 [.     426     457 ..     426     460 .. 0.82
   8 !   12.1   0.0   4.2e-05      0.13       9      30 ..     470     492 ..     463     496 .. 0.76
   9 !   19.2   0.0   2.2e-07   0.00066       9      34 ..     514     539 ..     511     540 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.98
                HHHSCHHHHHHH CS
         PUF 23 lehateeqkkli 34
                le++++eq+k+i
  EPX70642.1 38 LECLVKEQQKQI 49
                799999**9998 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.1
                 TSTTHHHHHHHHHHHSCHH CS
         PUF  11 tdqyGnyvvQkllehatee 29 
                 +dq ++  +Q+ l+  + +
  EPX70642.1 252 NDQSASLYLQQKLKSDDQK 270
                 58889999***99865555 PP

  == domain 3  score: 28.5 bits;  conditional E-value: 2.5e-10
                 HGGGHHHHHTSTTHHHHHHHHHHHSCHHHH CS
         PUF   2 ikgnlvqLstdqyGnyvvQkllehateeqk 31 
                 i+++  +L+t+++Gn+++Qk+le ++e q 
  EPX70642.1 279 ILPFSYTLMTNKFGNFLIQKCLEQCDEQQL 308
                 578999*****************9999986 PP

  == domain 4  score: 23.3 bits;  conditional E-value: 1.2e-08
                 GHHHHHTSTTHHHHHHHHHHHSCHHHHHH CS
         PUF   5 nlvqLstdqyGnyvvQkllehateeqkkl 33 
                 ++ +Lst+ +G++vvQk +e  +e+  ++
  EPX70642.1 318 HISELSTNAFGSHVVQKSFEIYPENFASS 346
                 899*****************988877665 PP

  == domain 5  score: 2.6 bits;  conditional E-value: 0.043
                 TTHHHHHHHHHHH CS
         PUF  13 qyGnyvvQklleh 25 
                 ++ ++v Qk+le+
  EPX70642.1 362 RHSCHVWQKFLET 374
                 689*********8 PP

  == domain 6  score: 19.3 bits;  conditional E-value: 2.1e-07
                 HGGGHHHHHTSTTHHHHHHHHHHHSCHHHHHHHH CS
         PUF   2 ikgnlvqLstdqyGnyvvQkllehateeqkklil 35 
                 + gn++q++   +G+ vvQ+++e ++e +k+ +l
  EPX70642.1 391 LTGNWTQIAMSEMGSLVVQTIFENCKEQEKRPCL 424
                 789**************************99875 PP

  == domain 7  score: 25.7 bits;  conditional E-value: 2e-09
                 HHGGGHHHHHTSTTHHHHHHHHHHHSCHHHHH CS
         PUF   1 sikgnlvqLstdqyGnyvvQkllehateeqkk 32 
                 +i++n +++++ q+Gn+v+Q+++eh ++ +++
  EPX70642.1 426 EIIENTHSIISGQWGNWVIQHIIEHGSKDDQE 457
                 6899********************75555544 PP

  == domain 8  score: 12.1 bits;  conditional E-value: 4.2e-05
                 HHTSTTHHHHHHHHHHH.SCHHH CS
         PUF   9 LstdqyGnyvvQklleh.ateeq 30 
                 +st+qy++ vv++ l + + ++ 
  EPX70642.1 470 YSTNQYASKVVERALRMnNRTFF 492
                 79*************99444444 PP

  == domain 9  score: 19.2 bits;  conditional E-value: 2.2e-07
                 HHTSTTHHHHHHHHHHHSCHHHHHHH CS
         PUF   9 LstdqyGnyvvQkllehateeqkkli 34 
                 +++ qyGny+vQ+ll  at++qk+l+
  EPX70642.1 514 IASSQYGNYIVQHLLYAATPFQKRLL 539
                 8999***********88*****9986 PP

>> CPL  CPL (NUC119) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.2   7.2e-06     0.021      54     133 ..     270     354 ..     268     364 .. 0.91
   2 !    8.9   0.0   0.00061       1.8      45     103 ..     373     436 ..     357     457 .. 0.74
   3 !    5.7   0.0     0.006        18      59      95 ..     423     459 ..     417     493 .. 0.79
   4 ?   -2.4   0.0       1.9   5.6e+03       2      23 ..     504     525 ..     503     545 .. 0.69

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 7.2e-06
         CPL  54 aispallsaiaknaeellsdnlgsqfvaevLlsaegdkq.....eaieaiaklakgdlvaeekdeelhliekpfgsrlLKaLiqg 133
                 ++  al+++i     +l+++++g  +++++L+++++++      +++  i +l  + + ++ +++++ ++ ++f+s l+ +L+++
  EPX70642.1 270 KMKHALIQCILPFSYTLMTNKFGNFLIQKCLEQCDEQQLegfaqQLMAHISELSTNAFGSHVVQKSFEIYPENFASSLINKLMEQ 354
                 78899*****************************9987788888999999999999988888*******************9987 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00061
         CPL  45 evRrkELleaispallsaiaknaeellsdnlgsqfvaevLlsaegdkq.....eaieaiaklak 103
                 e+Rrk       + + + ++ n +++ ++++gs +v+ + ++++++++     e+ie+  ++++
  EPX70642.1 373 ETRRKSCAIGTMDTFNEKLTGNWTQIAMSEMGSLVVQTIFENCKEQEKrpclnEIIENTHSIIS 436
                 778888888889999999999*********************9998876444444433333333 PP

  == domain 3  score: 5.7 bits;  conditional E-value: 0.006
         CPL  59 llsaiaknaeellsdnlgsqfvaevLlsaegdkqeai 95 
                  l+ i +n+++++s + g  ++++++++ ++d+qe++
  EPX70642.1 423 CLNEIIENTHSIISGQWGNWVIQHIIEHGSKDDQEIV 459
                 5788999************************999544 PP

  == domain 4  score: -2.4 bits;  conditional E-value: 1.9
         CPL   2 dkygRrvllYllsgrdgryfsp 23 
                 dk+gR  l+ + s + g+y+ +
  EPX70642.1 504 DKWGRILLMDIASSQYGNYIVQ 525
                 7788877777776666666654 PP

>> Bcl-2  Apoptosis regulator proteins, Bcl-2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.1     0.047   1.4e+02      53      88 ..     278     326 ..     233     335 .. 0.60
   2 !   11.8   0.3    0.0001      0.31      28      96 ..     375     446 ..     344     447 .. 0.71
   3 ?    0.9   0.0      0.25   7.5e+02      27      56 ..     486     514 ..     457     550 .. 0.67

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.047
                 HHHHHHHHHHHH.............HHHCHHHCCHHHHHHHHHHHHSSH CS
       Bcl-2  53 alfafagalaer.............lvrdglpellrrlvellvdyleer 88 
                  ++ f ++l+ +             + +++l+++ ++l++ +++  ++ 
  EPX70642.1 278 CILPFSYTLMTNkfgnfliqkcleqCDEQQLEGFAQQLMAHISELSTNA 326
                 4555555555555555555555555888899999999999988876665 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 0.0001
                 SSHCHHHHHHHHCCTTS--SCHHHHH...HHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHSSHHHHHHHCT CS
       Bcl-2  28 ealelfakvaeelfsdgelnWgrvva...lfafagalaerlvrdglpellrrlvellvdyleerlrawieeq 96 
                 + +++    ++++ ++ + nW ++++      +++++ e++++++++ +l++++e + +++ ++  +w+ ++
  EPX70642.1 375 RRKSCAIGTMDTFNEKLTGNWTQIAMsemGSLVVQTIFENCKEQEKRPCLNEIIENTHSIISGQWGNWVIQH 446
                 4444566666666664345999999855445678899999*****************************987 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.25
                 .SSHCHHHHHHHHCCTTS--SCHHHHHHHH CS
       Bcl-2  27 eealelfakvaeelfsdgelnWgrvvalfa 56 
                  +++++f+  +  + +  + +Wgr++ +  
  EPX70642.1 486 MNNRTFFNDYIALITEP-QDKWGRILLMDI 514
                 45677788888888884.358999987655 PP

>> UTP15_C  UTP15 C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.5e-05     0.044      63     129 ..     296     361 ..     295     374 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.5e-05
     UTP15_C  63 lraALagrdeeslepiLkfllkhitdpryvsllvdvanvlldlyseklgqseeldelvkrLkrkvre 129
                 ++++L++ de++le + + l+ hi++ +   +  +v+++ +++y e++ +s  +++l+++L +++ +
  EPX70642.1 296 IQKCLEQCDEQQLEGFAQQLMAHISELSTNAFGSHVVQKSFEIYPENFASS-LINKLMEQLPETLMQ 361
                 5799********************************************877.899999999988766 PP

>> YnfE  Uncharacterized YnfE-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.4   0.00011      0.32      20      46 ..      19      45 ..      13      68 .. 0.83
   2 ?   -1.6   0.0       1.2   3.5e+03      33      48 ..     305     320 ..     299     332 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00011
        YnfE 20 pDYeGkeeDlekqkeqlelYekqLkqe 46
                pD+ GkeeD+ +   q+e  e  +k++
  EPX70642.1 19 PDFRGKEEDMSQLASQIEYLECLVKEQ 45
                9****************9988776654 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.2
        YnfE  33 keqlelYekqLkqess 48 
                 ++qle +++qL ++ s
  EPX70642.1 305 EQQLEGFAQQLMAHIS 320
                 5799******987654 PP

>> DUF16  Protein of unknown function DUF16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   2.1   0.00038       1.1      34      86 ..      19      71 ..       5      80 .. 0.81
   2 ?   -0.2   0.1      0.48   1.4e+03      35      87 ..     225     278 ..     212     293 .. 0.73

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00038
                HHHHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHH.......HHH CS
       DUF16 34 qrLkkieakvdklgeqinkleqkvekqgekikelkveqkaqgeelnkvdetle 86
                 +++  e+ +++l  qi+ le  v++q+++i     e++++g+++  +++ l 
  EPX70642.1 19 PDFRGKEEDMSQLASQIEYLECLVKEQQKQIASSAIEVQKKGDQVRDLQKRLT 71
                3778889999999999***************9999999999999997777665 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.48
                 HHHHHHH.HHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHH.......HHHH CS
       DUF16  35 rLkkiea.kvdklgeqinkleqkvekqgekikelkveqkaqgeelnkvdetlel 87 
                   k++e+ +v++++ + + + +++   +++   l  +qk ++++ +  +  ++ 
  EPX70642.1 225 SCKESETpEVSSHNYKWKSVIEQIIFRNDQSASLYLQQKLKSDDQKMKHALIQC 278
                 456666547889999999999988888888888877777666654444444555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (568 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       954  (0.0532099); expected 358.6 (0.02)
Passed bias filter:                      490  (0.02733); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.60u 0.29s 00:00:00.88 Elapsed: 00:00:00.44
# Mc/sec: 3911.12
//
Query:       EPX70643.1  [L=109]
Description: histone chaperone Chz1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.2e-10   40.7   3.3    1.5e-10   40.4   0.0    2.6  2  CHZ          Histone chaperone domain CHZ


Domain annotation for each model (and alignments):
>> CHZ  Histone chaperone domain CHZ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.5     0.038   6.9e+02       1      12 [.      28      39 ..      28      39 .. 0.87
   2 !   40.4   0.0   8.3e-15   1.5e-10       1      34 []      57      89 ..      57      89 .. 0.94

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.038
         CHZ  1 eeedeLeEIDts 12
                e+e + eE++ s
  EPX70643.1 28 EDEGDFEELSSS 39
                79999***9987 PP

  == domain 2  score: 40.4 bits;  conditional E-value: 8.3e-15
         CHZ  1 eeedeLeEIDtsNIIsgGRRTRgktiDfakaaek 34
                +e ++L +ID++NI + ++RTR k+iDf+ka ++
  EPX70643.1 57 DEPEDLTAIDPTNITC-SSRTRNKKIDFSKALQE 89
                5899************.9*************886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       444  (0.0247643); expected 358.6 (0.02)
Passed bias filter:                      208  (0.0116013); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 799.87
//
Query:       EPX70644.1  [L=530]
Description: hypothetical protein SOCG_04312 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.9e-78  261.3   0.6    7.7e-78  260.6   0.6    1.3  1  UPF0300   Uncharacterised protein family (UPF0300)


Domain annotation for each model (and alignments):
>> UPF0300  Uncharacterised protein family (UPF0300)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  260.6   0.6   4.3e-82   7.7e-78       2     210 ..     232     440 ..     231     442 .. 0.99

  Alignments for each domain:
  == domain 1  score: 260.6 bits;  conditional E-value: 4.3e-82
     UPF0300   2 lkkfeelfkelseflekgniplsvLihhvmLYdyYpeelkdalWkAvevyvseqvssgkytklhvkaaqkklgdiRlyLvkpediyvvknssdWiaisn 100
                 +++fe+ ++elsefl +g++pl+vL+hhvmLY+yYp+++kd+lWkAvevy++ ++++++y++++v+aa++klgdiRly+v p+diy+++ns+dWi+i++
  EPX70644.1 232 FNAFESHYRELSEFLLSGRAPLNVLVHHVMLYHYYPTSMKDVLWKAVEVYMDTHCTEERYSRIQVEAAKRKLGDIRLYFVCPSDIYKFTNSKDWITIAT 330
                 7899*********************************************************************************************** PP

     UPF0300 101 knFqcyiqleekleekklksekskieelasvaeseeelgWLllllsigsnasafPihaYlnakkkllesklpesllllrkeDellfqdkeeieeleell 199
                 + F +yiq +++l+  ++++++++i el+ +a+s+++++WL+ll++ gsn+s+fP+h+Y+n+k+++le k++ +++l+++eD l+f+dke i+e++ ++
  EPX70644.1 331 RGFISYIQAKKPLCLGSIPVNNKNIAELFPYASSSNCMAWLTLLVCAGSNGSRFPLHTYINVKTRILECKTSVTDFLYSDEDLLFFEDKETIDEFKPIQ 429
                 *************************************************************************************************** PP

     UPF0300 200 kelledlakce 210
                 ++ll++l++c+
  EPX70644.1 430 RQLLKELTDCD 440
                 **********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (530 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       815  (0.0454571); expected 358.6 (0.02)
Passed bias filter:                      541  (0.0301746); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.25s 00:00:00.85 Elapsed: 00:00:00.43
# Mc/sec: 3708.71
//
Query:       EPX70645.1  [L=1165]
Description: DNA-directed RNA polymerase III complex subunit Rpc2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   1.8e-126  422.4   0.1   2.9e-126  421.7   0.1    1.3  1  RNA_pol_Rpb2_6  RNA polymerase Rpb2, domain 6
    2.1e-64  216.8   0.1      3e-64  216.3   0.1    1.2  1  RNA_pol_Rpb2_1  RNA polymerase beta subunit
    1.1e-39  136.0   0.1    3.9e-39  134.2   0.0    1.9  2  RNA_pol_Rpb2_2  RNA polymerase Rpb2, domain 2
    1.2e-33  115.4   0.2    3.4e-33  113.9   0.2    1.9  1  RNA_pol_Rpb2_7  RNA polymerase Rpb2, domain 7
    3.2e-23   81.8   0.4    8.9e-23   80.4   0.3    1.8  2  RNA_pol_Rpb2_4  RNA polymerase Rpb2, domain 4
    5.5e-18   64.9   0.1    1.1e-17   63.9   0.1    1.6  1  RNA_pol_Rpb2_3  RNA polymerase Rpb2, domain 3
    2.4e-11   44.0   2.2    7.9e-11   42.4   2.2    2.0  1  RNA_pol_Rpb2_5  RNA polymerase Rpb2, domain 5
  ------ inclusion threshold ------
      0.059   13.8   0.0        1.2    9.6   0.0    2.7  2  OAM_dimer       Dimerisation domain of d-ornithine 4,5-aminom


Domain annotation for each model (and alignments):
>> RNA_pol_Rpb2_6  RNA polymerase Rpb2, domain 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  421.7   0.1  1.3e-129  2.9e-126       1     390 []     697    1072 ..     697    1072 .. 0.94

  Alignments for each domain:
  == domain 1  score: 421.7 bits;  conditional E-value: 1.3e-129
                      HHHT-SS-TTB-HHHHHHHHHHGGGB-S---TTTTT---SSEEEESS----SSB-S.TTTTTS........GGGS-SEEEEEBBBS--TTTTT CS
  RNA_pol_Rpb2_6    1 vaklapvvehvqspriiiqaamekqalgiyslnkfkrsnqktyllcinqkPlvktgdkveagqvldgpatekgelalGqnavVAvmsyeGYni 93  
                      va l+p+++h+qspr+++q+am+kqa+g + +n+ +r+++ +yl++++q+P+vkt+ ++e+++        +++l++Gqna+VA+msy+GY+i
      EPX70645.1  697 VAGLIPYPHHNQSPRNTYQCAMGKQAIGAIGYNQLQRIDTLLYLMVYPQQPMVKTK-TIELIG--------YDKLPAGQNATVAIMSYSGYDI 780 
                      6899****************************************************.******........********************** PP

                      TT-EEEBCHHHHTTTT-EEEEEE..EEE--SSSS---.-S--..-.....-SS-GGGS-TTSB--SS-EEETT-EEE---..B-----...-- CS
  RNA_pol_Rpb2_6   94 EDaiilnerlvdrdvftsihikeyeveardtklgeeeitrdipnv.....seealkkLdedGivrvgaevkegdilvgkvtkgeteltpeekl 181 
                      EDa+++n++++dr++ ++ ++++++v +r++++g+++ + d+ ++        ++k +++dG+  vg  v++g+++v+k   ++t+   ++  
      EPX70645.1  781 EDALVMNKASMDRGFGRCQVLHKHSVLIRKYPNGTHDRIGDPLKDpetgeVIWKHKIVEDDGLAAVGCPVQNGQVYVNKQ--TPTNALDNSIA 871 
                      ***********************************77777776666766566788999*********************6..55555543333 PP

                      ---------..-B---EE--TT-EEEEEEEEE.......EE-TT--EEEEEEEEEEE---TT-BEEETTS---BBEEEB-TTTSEEETTS--- CS
  RNA_pol_Rpb2_6  182 lraifgekarevkdtslrvksgeegvVdkvkvfsrekgdelkagvnklvkvyvaqkRklqvGDKfasrhGqKGvvslilpqeDmPfledGivv 274 
                      l  + ++ ++ +k t +++k  e+ +Vdkv++       +++++ ++l+kv ++q+R++++GDKf+srhGqKGv+++i++qeDmPf ++Gi++
      EPX70645.1  872 L-GQSQTVESGFKPTPMTYKAPEPSYVDKVML-------TTTDSDQTLIKVLMRQTRRPELGDKFSSRHGQKGVCGIIVQQEDMPFNDQGICP 956 
                      3.3333444459********************.......7888899*********************************************** PP

                      SEEE-GGGCHHH-BTTHHHHHHHHHCCCSSSS--B--TT-...-HHHHHHHHHTTS-TT-EE-EEETTTS-B-SS-EEB-EEEEEEBS--CCC CS
  RNA_pol_Rpb2_6  275 DivlNPlgvPSRmtigqllEtllgkaaalegkkvdatvFdgakeeeikelLeeagleasGkevlydGrtGekleaeifvGviYylkLkhlved 367 
                      Di++NP+g+PSRmt+g+++E+l gka+ ++g+  ++t+F g+k ee ++ L e+g+++sGk++l++G+tGe+lea+if+G+iYy+kLkh+v d
      EPX70645.1  957 DIIMNPHGFPSRMTVGKMIELLSGKAGVMRGSLEYGTCFGGTKVEEASRVLVERGFNYSGKDMLTSGITGEPLEAYIFFGPIYYQKLKHMVLD 1049
                      *******************************************9************************************************* PP

                      S----SS--B-TTT--B-SCGGG CS
  RNA_pol_Rpb2_6  368 KihaRstGpyslltqQPlgGkaq 390 
                      K+haR++Gp  +lt+QP++G+++
      EPX70645.1 1050 KMHARARGPRAVLTRQPTEGRSR 1072
                      *********************86 PP

>> RNA_pol_Rpb2_1  RNA polymerase beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  216.3   0.1   1.3e-67     3e-64       1     203 []      62     442 ..      62     442 .. 0.99

  Alignments for each domain:
  == domain 1  score: 216.3 bits;  conditional E-value: 1.3e-67
                     CTTHHHHHHHHHHHHTHHHHHCTTSSECCHCSSSHCSSSCEEEEEEEEEEESCSSECTTSCEEES.HHHHHHCTSBXEEEEEEEEEEEECCCCTC CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  RNA_pol_Rpb2_1   1 gLvsqqldSFnkfveqdlekiikeeaaieseeeiqssgeelelkfvsirlgkPvvdesdasereiyPkearlrnltYsaplyvklklvvyekdnk 95 
                     gLv+q+ldSFn+fv+ dl+ki++++++++s++e++     ++lk+ +ir+g Pv +++da +++i+P+e+rlr+ltY a++yv++++++     k
      EPX70645.1  62 GLVKQHLDSFNYFVDVDLKKIVQANQKVTSDVEPW-----FYLKYLDIRVGAPVRTDADAIQASITPHECRLRDLTYGANIYVDVEYTR----GK 147
                     69********************************9.....*************************************************....89 PP

                     CEEEEEEEEEEEEEXBTTSTTSSSTTS.HHHHHHTTS.TTS..SSEEETTCEEEEXEEEE................................... CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................................... RF
  RNA_pol_Rpb2_1  96 eeikeeevyiGelPlMlrskacvlseaseeelvelkEcpldqGGyFiinGtekvivaqek................................... 155
                     +  ++++v iG++P+Mlrs++cvl++++e+e++ l+Ecpld+GGyF+++Gtekvi++qe+                                   
      EPX70645.1 148 QVVRRRNVPIGRMPVMLRSNKCVLHGKTESEMATLNECPLDPGGYFVVKGTEKVILVQEQlsknriiveaepkkgmfqasvtsstherksktyvv 242
                     *********************************************************************************************** PP

                     ............................................................................................... CS
                     ............................................................................................... RF
  RNA_pol_Rpb2_1 156 ............................................................................................... 155
                                                                                                                    
      EPX70645.1 243 hkngklylkhnsvaddipivavlkamglqsdqeifelvagneasyqdlfapsveecaklnifttqqaleyigarvkvnrragaarlpsheealev 337
                     *********************************************************************************************** PP

                     ....................................................XHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTSS.....SSSHH CS
                     ....................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxx RF
  RNA_pol_Rpb2_1 156 ....................................................laGeLlaslfrvllkklerdvkerlqkslekld.....dlmlq 193
                                                                         laG+Lla lf++l+kk+++d+k +++k+l+k++     d+++q
      EPX70645.1 338 laavvlahinvsnldfrpkavyiavmtrrvlismvdpslvddrdyvgnkrleLAGQLLALLFEDLFKKFNSDMKLNIDKVLKKPHrtqefDAYNQ 432
                     *************************************************************************************9988889999 PP

                     HHSCSHHHHH CS
                     xxxxxxxxxx RF
  RNA_pol_Rpb2_1 194 llvnakpita 203
                     l v+ ++it+
      EPX70645.1 433 LSVHGDQITQ 442
                     9999999986 PP

>> RNA_pol_Rpb2_2  RNA polymerase Rpb2, domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.2   0.0   1.8e-42   3.9e-39       2     190 .]     210     389 ..     209     389 .. 0.97
   2 ?   -1.9   0.0      0.98   2.2e+03     134     152 ..     520     538 ..     517     553 .. 0.78

  Alignments for each domain:
  == domain 1  score: 134.2 bits;  conditional E-value: 1.8e-42
                     TSCEEEEE-SSSSSESSSCCEECCCEEEEECCCCSTSCEEEEECTTSSSEEEHHHHHHHTT--STTHHHHHHTSSSTTHHHHHHHHHHHHHHCTS CS
  RNA_pol_Rpb2_2   2 sngiyvekekdknkisatvtsslisqrgsvlklekdgktliwtriskkrkipivivlkAlglvsdreIlericydsedsqlleelleeleekeei 96 
                     +n+i+ve+e++k  ++a+vtss+++++++++++ k+gk +++++ s+ ++ipiv vlkA+gl+sd+eI+e + ++++++q+l++   e++ k +i
      EPX70645.1 210 KNRIIVEAEPKKGMFQASVTSSTHERKSKTYVVHKNGKLYLKHN-SVADDIPIVAVLKAMGLQSDQEIFELVAGNEASYQDLFAPSVEECAKLNI 303
                     8***************************************9998.************************************************** PP

                     SSCHHHHHHHHH.CSSTTSSSCCCCCHHHHHHHCHHHHHHHTTTTSSTTTTTSSSTCHH..HHHHHHHHHHHHHHHHTTSSSS--TTSGGGEEEE CS
  RNA_pol_Rpb2_2  97 qtqeealdyigk.vvalrrgeearlqsareilqkrydlgeigreklnkhlglseslenkrlkaqdilymidrLlslklgrrevDDiDhlgnkRvr 190
                      t+++al+yig+ v+  rr  +arl+s++e+l       e+   ++++h+++s+  ++   ka +i+ m++r+l  ++++  vDD+D++gnkR++
      EPX70645.1 304 FTTQQALEYIGArVKVNRRAGAARLPSHEEAL-------EVLAAVVLAHINVSNLDFRP--KAVYIAVMTRRVLISMVDPSLVDDRDYVGNKRLE 389
                     ************99999***************.......599999999*******9999..********************************95 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.98
                     HHHTTTTSSTTTTTSSSTC CS
  RNA_pol_Rpb2_2 134 geigreklnkhlglsesle 152
                     g + +  l++h++++e+ e
      EPX70645.1 520 GLVKNLALMTHITTDEEEE 538
                     678889999******9944 PP

>> RNA_pol_Rpb2_7  RNA polymerase Rpb2, domain 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.9   0.2   1.5e-36   3.4e-33       1      86 [.    1074    1159 ..    1074    1160 .. 0.98

  Alignments for each domain:
  == domain 1  score: 113.9 bits;  conditional E-value: 1.5e-36
                      BBEEEEHHHHHHHHHHTBHHHHHHHHTTTTTEEEEEEESSSSSCCCEEEBTTTTCSSSEEEEEEEHHHHHHHHHHHHTTBEEEEES CS
  RNA_pol_Rpb2_7    1 GGlrfGEMErdaliayGaaalLkerltikSDavevdvcgrckllaaaneCkivkseekiekveipeafklLlqeLqslgialklll 86  
                      GGlr+GEMErd+liayGa++lL erl+ +SDa++vdvcg+c+ll +  +C+ ++s++++ k++ip+a+klL+qeL s++i ++l l
      EPX70645.1 1074 GGLRLGEMERDCLIAYGASQLLLERLMLSSDACDVDVCGECGLLGYRGWCNSCQSTKNVVKMTIPYAAKLLFQELLSMNIVPRLAL 1159
                      9********************************************************************************99875 PP

>> RNA_pol_Rpb2_4  RNA polymerase Rpb2, domain 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.4   0.3     4e-26   8.9e-23       1      62 []     568     629 ..     568     629 .. 0.99
   2 ?   -3.3   0.0       5.1   1.1e+04       5      26 ..     899     921 ..     896     930 .. 0.70

  Alignments for each domain:
  == domain 1  score: 80.4 bits;  conditional E-value: 4e-26
                     EECTT-BEEE-S-HCCHHHHHHHHCCTTSS-TT-EEEE-TTT--EEEE-SSEEB-EEEEE-S CS
  RNA_pol_Rpb2_4   1 VfvNGrllGvtrdpkklvetlRelRRkgkiseevsivlnekqkevkiatDgGRvcRPliiVe 62 
                     V++NG +lG+ + p  +v+++R+lRR+gkis++v +++n +q+ v i+tDgGR+cRPliiV+
      EPX70645.1 568 VYLNGMILGISKYPTLFVSSFRRLRRSGKISPFVGVFINTHQRAVFISTDGGRICRPLIIVQ 629
                     9************************************************************6 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 5.1
                     T-BEEE-S-HCCHHHH.HHHHCC CS
  RNA_pol_Rpb2_4   5 GrllGvtrdpkklvet.lRelRR 26 
                      ++l +t++ + l++  +R+ RR
      EPX70645.1 899 KVMLTTTDSDQTLIKVlMRQTRR 921
                     56777888889999872577887 PP

>> RNA_pol_Rpb2_3  RNA polymerase Rpb2, domain 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.9   0.1   5.1e-21   1.1e-17       2      68 .]     468     531 ..     467     531 .. 0.96

  Alignments for each domain:
  == domain 1  score: 63.9 bits;  conditional E-value: 5.1e-21
  RNA_pol_Rpb2_3   2 vldrlnplselshlrrvsslrgglskerkttevRdlhpshwGriCpveTPEGencGlvksLallarv 68 
                     vl rl+++s l  ++r++s    ++k+rk + +R l+ps++G++C ++TPEGe cGlvk+Lal++++
      EPX70645.1 468 VLSRLSFISALGMMTRITSQ---FEKTRKVSGPRSLQPSQFGMLCTSDTPEGEACGLVKNLALMTHI 531
                     7899**************87...*****************************************987 PP

>> RNA_pol_Rpb2_5  RNA polymerase Rpb2, domain 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.4   2.2   3.5e-14   7.9e-11       1      58 []     650     690 ..     650     690 .. 0.94

  Alignments for each domain:
  == domain 1  score: 42.4 bits;  conditional E-value: 3.5e-14
                     HHHHHHTTSEEEEEHHHHTT--EESSTTTCSST-SSTTTSS--TTSSSST-SEEES-G CS
  RNA_pol_Rpb2_5   1 wddLlregvvEylDaeEEetamIamtpedleksreekealeekenskshtyTHcEIhP 58 
                     ++d+l+eg+vEy+D++EE++++I+++++d++ +                 +TH+EI+P
      EPX70645.1 650 FEDFLKEGLVEYVDVNEENDSLICVYEKDVTPE-----------------TTHLEIEP 690
                     89****************************776.................79999999 PP

>> OAM_dimer  Dimerisation domain of d-ornithine 4,5-aminomutase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.0   0.00054       1.2      26      60 ..     534     568 ..     514     573 .. 0.85
   2 ?    0.4   0.0       0.4     9e+02      34      62 ..     773     801 ..     761     810 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00054
                 HHHHHHHHHHHHCTTSEEEEEEEEEEEETTEEEEE CS
   OAM_dimer  26 eeAeeAAlelakkmGledpeVvhkeelheeftffv 60 
                 +e ee  ++la   G+ed++Vv+ +elh+ +t++v
  EPX70645.1 534 DEEEEPIIRLAYAFGVEDIHVVTGRELHSSGTYLV 568
                 5557777899***********************97 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.4
                 HHHHCTTSEEEEEEEEEEEETTEEEEEEE CS
   OAM_dimer  34 elakkmGledpeVvhkeelheeftffvvy 62 
                        +ed+ V++k +++++f +  v 
  EPX70645.1 773 MSYSGYDIEDALVMNKASMDRGFGRCQVL 801
                 334455689*************9988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1165 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       428  (0.0238719); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.80u 0.31s 00:00:01.11 Elapsed: 00:00:00.47
# Mc/sec: 7421.74
//
Query:       EPX70646.1  [L=885]
Description: N-acetyl-gamma-glutamyl-phosphate reductase/acetylglutamate kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.1e-37  129.3   0.1    5.3e-37  127.1   0.1    2.0  2  NAT             NAT, N-acetyltransferase, of N-acetylglutamat
    7.7e-29  100.6   0.0    1.6e-28   99.5   0.0    1.6  1  Semialdhyde_dh  Semialdehyde dehydrogenase, NAD binding domai
    6.3e-28   98.0   0.3    2.1e-27   96.3   0.1    1.8  2  AA_kinase       Amino acid kinase family
     0.0056   16.8   0.0      0.013   15.6   0.0    1.7  1  DapB_N          Dihydrodipicolinate reductase, N-terminus


Domain annotation for each model (and alignments):
>> NAT  NAT, N-acetyltransferase, of N-acetylglutamate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.22   9.8e+02      33      90 ..      60     115 ..      32     140 .. 0.69
   2 !  127.1   0.1   1.2e-40   5.3e-37       1     166 [.     326     489 ..     326     493 .. 0.97

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.22
                 XCCHHHHHHTTSTTTSSXHHHHHHHHHTSXEEEEEETTXSEEEEE.....EXSSSSXE CS
         NAT  33 dlekLksliedsfkrkldvkdYldrlkgkiakiyiaedyeglAivtwedpkeekevay 90 
                 d +++  ++++    + +v++Yl+   + +a+ +++ ++ g Ai+t e  +  +++a 
  EPX70646.1  60 DRDAIVRILSSIG-SRREVEQYLRYFTSFEAQRFAIIKV-GGAIITDELDTLAQSLAF 115
                 5566666665444.5666777776666655555555544.568888876665555554 PP

  == domain 2  score: 127.1 bits;  conditional E-value: 1.2e-40
                 GHHHHHHSSSTSSEEEE---XEEEESSCCCSSXCCHHHHHHTTST...TTSSXHHHHHHHHHTSXEEEEEETTXSEEEEE.....EXSSSSXEEEEEEE CS
         NAT   1 dlqkelftdsgagtlirrGlkvitvkslkelidlekLksliedsf...krkldvkdYldrlkgkiakiyiaedyeglAivtwedpkeekevayLdkFav 96 
                 dlqkelft+sgagt+i+rG+k+++++sl++l  +++L++li + +   +r  +++++ d+l + ++++y+++  e++A+v      +++e+++L  F +
  EPX70646.1 326 DLQKELFTESGAGTMISRGFKINQTDSLDSL-PAKALEDLILHHNalpSRYASIQEFKDSLADAKLRVYSDSYNESIAVV----DVSNPELPVLVAFGA 419
                 79*****************************.*********9999999********************************....558889********* PP

                 XHHHHHTTHHHHHHHHHHHHXSSEEEEEETTXTTHHHHHHCXSEEEEETTEEEEEESXXXHHHHHHHHHH CS
         NAT  97 lkssqgsgvsdvvfkalkkdfpkLvWrsrednpvnkWyfersdGslkksqwvlfWyGlkdlkeveelves 166
                  +++++++v d + ++l++df++L+Wr + + ++++W+fe+s+G+l  ++ ++fWyG++dl++++++++s
  EPX70646.1 420 YDRNWLNNVVDSLLSSLRTDFSSLLWRLHPSTKNLEWFFEKSEGTLFANNLYYFWYGTRDLNTISNFIKS 489
                 *******************************************************************987 PP

>> Semialdhyde_dh  Semialdehyde dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.5   0.0   3.6e-32   1.6e-28       1     115 [.     572     688 ..     572     695 .. 0.92

  Alignments for each domain:
  == domain 1  score: 99.5 bits;  conditional E-value: 3.6e-32
                     EEEEETTTSHHHHHHHHHHHCTSSEEEEEEEESTTTTTSBHHHHSGGGTTTECEBEEE.GGGGGCTT-SEEEE-SCHHHHHHHHHHH.HHTTS.E CS
  Semialdhyde_dh   1 kvaivGatGyvGqellrlLeehpevelvvllsssrsaGkklaeavkaleegkdlkved.vdeeelkevdivflalpagvskelapkl.aeagv.k 92 
                     kv ++Ga+G +G++l+ l+++hp++el++++s++  +G+kl  ++k+  ++ +l+v+d  + ee  +vd +++alp+gv+k+++++l  ++g  +
      EPX70646.1 572 KVVLLGARGHTGKNLISLINTHPHLELSHVSSREL-KGTKLPGYNKKEINYVNLSVDDvKKLEEEGAVDAWVMALPNGVCKPYVDALsSANGKsV 665
                     799***************************99999.**********************8888899**********************63444469 PP

                     EEESSSTTTTSTTSEBE-HHHHG CS
  Semialdhyde_dh  93 viDlssdfRlkddavyvlpevnr 115
                     ++Dls+d+R+++ + y+lpe+n 
      EPX70646.1 666 IVDLSADYRFENSWNYGLPELND 688
                     9********************95 PP

>> AA_kinase  Amino acid kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.3   0.1   4.6e-31   2.1e-27       3     228 ..      93     308 ..      91     314 .. 0.92
   2 ?   -1.6   0.0      0.36   1.6e+03      28      63 ..     564     607 ..     552     666 .. 0.70

  Alignments for each domain:
  == domain 1  score: 96.3 bits;  conditional E-value: 4.6e-31
                 EEEEE-TTCCCCTCCHHHHHHHHHHHHHHHHTTEEEEEE--HHHHHHHHHHTCCCCCHHHC....E..HHHHHHHHHHHHHHHHHHHHHHHHHTTHGEE CS
   AA_kinase   3 vVvKlGGssltdkeeaslrrlaeqiaalkesgnklvvVhGggsftdgllalksglssgelaaglrstleeagevatrdalaslgerlvaallaaglpav 101
                  ++K+GG+++td+    l+ la+ +a l+  g  ++vVhG+g++ +++la  +g+++++++ g+r t+ee++ va+    +  + +lv+al + g +a+
  EPX70646.1  93 AIIKVGGAIITDE----LDTLAQSLAFLNHVGLYPIVVHGAGPQLNKILAS-RGVEAEYSD-GIRITDEETLAVAR-KVFLEENAKLVEALERLGTRAR 184
                 69*********44....88********************************.*********.*************9.9999****************** PP

                 EE-GGGTCEECCCE...HHHTTTCEEECCHHHHHHHTT-EEEEESEEEEETTTEEEEE-HHHHHHHHHHHCTSSEEEEEESSSSCESSTTTTCCTTCEC CS
   AA_kinase 102 glsaaaldateagr.degsdgnvesvdaeaieelleagvvpvltgfigldeegelgrgssDtiaallAealgAdkliiltdVdGVydadpkkvpdarll 199
                 ++ +  + a+  ++ +++++g++ +v+++ ie+++ ag +p+lt ++  +  g+++++++D +a  lA al++ k+++l +  G+     kk      +
  EPX70646.1 185 PIVGGVFQAEYLDKeKYKYVGKIVNVNKAPIEHSIRAGTLPILTSMA-ETASGQCLNVNADITAGELARALKPLKVVYLNEKGGLIHGVTKKK-----I 277
                 *********************************************97.999***********************************9876655.....7 PP

                 CEEEHHHCHH..CSSS.TTTHHHHCHHHHHH CS
   AA_kinase 200 peisvdeaee..saselatgGmkvkhpaala 228
                 + i  d   +   ++ ++++G+k k+++  +
  EPX70646.1 278 SSIYLDREYNdlMKEPWVKYGTKLKIREIKE 308
                 777555444445568*********9998766 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.36
                 HHHHHHTTEEEEEE--.HHHHHHHHHH........TCCCCCHHHC CS
   AA_kinase  28 aalkesgnklvvVhGg.gsftdgllal........ksglssgela 63 
                 +a +++  k vv  G+ g+++ +l++l         s++ss+el+
  EPX70646.1 564 KAVSNQPSK-VVLLGArGHTGKNLISLinthphleLSHVSSRELK 607
                 555555556.88888889999999999777666666666666665 PP

>> DapB_N  Dihydrodipicolinate reductase, N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0     3e-06     0.013       2      49 ..     572     616 ..     571     670 .. 0.68

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 3e-06
                 EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTCSTTTTTBHHHHSS CS
      DapB_N   2 kvavvGasGrmGkevvkaveeaedlelvaavdrkeselegkdagellg 49 
                 kv+++Ga+G  Gk+++++++++++lel+ + +r+    +g+++    +
  EPX70646.1 572 KVVLLGARGHTGKNLISLINTHPHLELSHVSSREL---KGTKLPGYNK 616
                 89**************************9988864...4544443333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (885 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       384  (0.0214178); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.65u 0.30s 00:00:00.95 Elapsed: 00:00:00.45
# Mc/sec: 5904.63
//
Query:       EPX70647.1  [L=321]
Description: ornithine carbamoyltransferase Arg3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.6e-50  169.8   0.1    6.5e-50  169.3   0.1    1.2  1  OTCace    Aspartate/ornithine carbamoyltransferase, Asp/Orn b
    3.2e-44  150.5   0.0    4.9e-44  149.9   0.0    1.3  1  OTCace_N  Aspartate/ornithine carbamoyltransferase, carbamoyl


Domain annotation for each model (and alignments):
>> OTCace  Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  169.3   0.1   7.3e-54   6.5e-50       1     155 [.     160     312 ..     160     314 .. 0.97

  Alignments for each domain:
  == domain 1  score: 169.3 bits;  conditional E-value: 7.3e-54
                 CC.EEEEESSTTSHHHHHHHHHHHHCT-EEEEES-TTSSH-HHHHHHHHHHHHHHT-EEEEESSCHHHHTT-SEEEE--SSETTCCGGHHHHHHHHCCC CS
      OTCace   1 kglkiafvGdkknnvanslikllarlgmdvvlvaPkglepdkevleeakknakksggsititedleeavkgaDvvytdvwvsmgeekereerlkklkdy 99 
                 k+lk+a++Gd+ nnv+++l++++a++g++ +++ Pk+++   ++l++++++ k+s++++++ +d++ a+k+aD+v+td+w+smg+e+er+ rlk+++++
  EPX70647.1 160 KNLKLAWIGDA-NNVLHDLMIACAKVGIETSIANPKDVKIRSDILDMVHESSKESNSKFSVGNDPATAAKNADIVVTDTWISMGQEAERQVRLKQFAGF 257
                 689********.*************************************************************************************** PP

                 SB-HHHHHHS-TT-EEEE-S---BTTTB-HHHHTSTTBHHHHHHHHHHHHHHHHHH CS
      OTCace 100 qvteellklakkdaivlHcLPakrgeEvtdeVfdsprsvvfeqaeNrlhtikAllv 155
                 qvte++++lak++++++HcLP  + eEv+d Vf +p+s+vf +aeNr +t  A l 
  EPX70647.1 258 QVTEKIMQLAKPHCKFMHCLP-RHPEEVSDAVFYGPNSLVFPEAENRKWTTIAALE 312
                 *********************.678************************9988775 PP

>> OTCace_N  Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.9   0.0   5.5e-48   4.9e-44       1     148 []       8     154 ..       8     154 .. 0.94

  Alignments for each domain:
  == domain 1  score: 149.9 bits;  conditional E-value: 5.5e-48
                 S-BSSGGGS-HHHHHHHHHHHHHHHHHHHT......TT-STT....TTT-EEEEEESS--HHHHHHHHHHHHHTTSEEEEEESTTTSCTTTGGSTTSSC CS
    OTCace_N   1 rhllsledlskeeieelldlaaelkekvkk......ekkekl....lkgktlallFeepStRTrvSfevAakrlGgkvlslseaediqlssvskgrkEs 89 
                 rhlls+ dls++e+ +l++++ae+k+++k+      +         l+g+++a++F ++StRTrvS+e++++ lGg++++l+ +ediql+     ++Es
  EPX70647.1   8 RHLLSIGDLSRQELLKLITRSAEIKHESKRrfanreN----CqlggLEGQNIAMIFNKRSTRTRVSVETGVNSLGGTPMFLG-KEDIQLG-----VNES 96 
                 8************************999987765322....144669***********************************.88*****.....99** PP

                 HHHHHHHHHHHTSEEEEEESSHHHHHHHHHHHSSEEEEEEETSSB-HHHHHHHHHHHHH CS
    OTCace_N  90 leDtarvlsryvdaiviRhpgaeeleelakyasvpviNagdgdgeHPtQaLaDlltire 148
                 ++Dt +v+s++v +iv+R+++ +++ +lak+as+pviN++ +d+ HP+QaLaDllti+e
  EPX70647.1  97 FYDTSKVVSSMVAGIVARVSKYDDVASLAKHASCPVINGL-CDTFHPLQALADLLTIQE 154
                 ********************999*****************.****************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       529  (0.0295053); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 2200.67
//
Query:       EPX70648.1  [L=202]
Description: mismatch-binding protein cmb1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.8e-09   35.8   1.5    2.4e-08   34.4   0.1    2.2  2  HMG_box_2        HMG-box domain
    1.4e-08   35.0   5.5      7e-08   32.8   0.7    2.6  2  HMG_box          HMG (high mobility group) box
  ------ inclusion threshold ------
      0.069   13.6   0.5        4.6    7.7   0.1    2.3  2  ACP_PD           Acyl carrier protein phosphodiesterase
      0.079   12.9   2.1       0.98    9.4   0.1    2.4  2  Phe_tRNA-synt_N  Aminoacyl tRNA synthetase class II, N-termin
       0.09   13.0   1.2        1.3    9.2   0.1    2.1  2  Fib_alpha        Fibrinogen alpha/beta chain family
       0.15   10.5   0.2       0.23    9.9   0.2    1.2  1  Aldedh           Aldehyde dehydrogenase family


Domain annotation for each model (and alignments):
>> HMG_box_2  HMG-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1       0.5   1.5e+03      51      66 ..      71      86 ..      47      93 .. 0.68
   2 !   34.4   0.1   8.2e-12   2.4e-08       3      66 ..     123     191 ..     121     197 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.5
                HHHHHHHHHHHHHHHH CS
   HMG_box_2 51 KekYeekAkedkkryd 66
                K+++e +  ++kk++d
  EPX70648.1 71 KQEFESEYAAKKKEFD 86
                5666666666666655 PP

  == domain 2  score: 34.4 bits;  conditional E-value: 8.2e-12
                 -.-SS--HHHHHHHTTHH..HHHHH.T--..-SSHHHHTGGGHHHHHHS-HHHHHHHHHHHHHHHHHHH CS
   HMG_box_2   3 kpkaarnAYalfvqemip..elkrk.Gnp..viglaevsklcsekWkalseeeKekYeekAkedkkryd 66 
                  pk++  A++lf ++  +   l+++ G p   + l e s+ +se+Wk lse+ +++Y +kAk   k+y 
  EPX70648.1 123 LPKRPAGAFNLFLLDIMNseSLRKEmGVPtlSPYLTENSRMVSESWKKLSEQKRQEYVKKAKDALKEYH 191
                 5999**********976421466668999877889***************************9888886 PP

>> HMG_box  HMG (high mobility group) box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.4     0.023        70      45      65 ..      69      89 ..      53      93 .. 0.61
   2 !   32.8   0.7   2.4e-11     7e-08       1      65 [.     124     194 ..     124     196 .. 0.91

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.023
                HHHHHHHHHHHHHHHHHHHHH CS
     HMG_box 45 eeKkkYeekaekekaryekek 65
                + K+++e ++++ k++++   
  EPX70648.1 69 KFKQEFESEYAAKKKEFDDHL 89
                346667777777777666655 PP

  == domain 2  score: 32.8 bits;  conditional E-value: 2.4e-11
                 --SS--HHHHHHHH..HHHHHHHHS..TTS-..HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH CS
     HMG_box   1 pkRplsafflfske..qraklkaen..Pelk..naeiskklgekWkalseeeKkkYeekaekekaryekek 65 
                 pkRp  af+lf+ +  + ++l++e+  P+l+   +e s++++e Wk+lse+++++Y +ka+ + ++y+++ 
  EPX70648.1 124 PKRPAGAFNLFLLDimNSESLRKEMgvPTLSpyLTENSRMVSESWKKLSEQKRQEYVKKAKDALKEYHEAL 194
                 8**********9874457899999777****999*********************************9986 PP

>> ACP_PD  Acyl carrier protein phosphodiesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0     0.022        66      10      68 ..      60     118 ..      48     140 .. 0.76
   2 ?    7.7   0.1    0.0015       4.6       6      35 ..     165     194 ..     163     200 .. 0.90

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.022
      ACP_PD  10 seysaepLeefvqrvyaqlekneealPerlqrllprmieedwLesYaelegieralqrm 68 
                 s++ +e+ ++f q+++++ +++++++ ++l+++    i+e+  ++++el+ +   lq++
  EPX70648.1  60 SKLGPEEVNKFKQEFESEYAAKKKEFDDHLRQFSLAQIREENRRRMKELKPLGVNLQKL 118
                 44457888999999999999999999999999877777776667777777666666665 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.0015
      ACP_PD   6 arnwseysaepLeefvqrvyaqlekneeal 35 
                 +++w+++s+++ +e+v++++++l++++eal
  EPX70648.1 165 SESWKKLSEQKRQEYVKKAKDALKEYHEAL 194
                 679*********************999877 PP

>> Phe_tRNA-synt_N  Aminoacyl tRNA synthetase class II, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.1   0.00033      0.98      41      61 ..      66      86 ..      64      94 .. 0.89
   2 ?    2.7   0.3     0.041   1.2e+02      26      55 ..     167     196 ..     163     202 .] 0.80

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00033
                     CCHHHHCCCCCCCCCHHHCCH CS
  Phe_tRNA-synt_N 41 liNelKqeieealeerkeele 61
                     ++N+ Kqe+e+ ++++k+e+ 
       EPX70648.1 66 EVNKFKQEFESEYAAKKKEFD 86
                     69****************986 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.041
                      TTTTCCCCTTTHHHHCCHHHHCCCCCCCCC CS
  Phe_tRNA-synt_N  26 elgklppeeRkeaGkliNelKqeieealee 55 
                      + +kl++++R+e+ k++ ++ +e  eal++
       EPX70648.1 167 SWKKLSEQKRQEYVKKAKDALKEYHEALKA 196
                      678999999999999988888888888876 PP

>> Fib_alpha  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.1   0.00044       1.3      59     124 ..      53     111 ..      26     118 .. 0.73
   2 ?    2.7   0.1     0.044   1.3e+02      59      94 ..     162     195 ..     152     201 .. 0.69

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00044
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH CS
   Fib_alpha  59 keikdslrekqkskkdndnvikksskeleeeilrlketidaqesnirvLqnvlesneqkiqkLeqd 124
                  +i+d++ +         + ++k+++e e+e++  k++ d++ ++   L ++ e+n++++++L+  
  EPX70648.1  53 DQIRDVYSKLG------PEEVNKFKQEFESEYAAKKKEFDDHLRQF-SLAQIREENRRRMKELKPL 111
                 44444433322......45689*********************998.58999***********965 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.044
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH CS
   Fib_alpha  59 keikdslrekqkskkdndnvikksskeleeeilrlk 94 
                 + +++s+++  ++k+  ++++kk ++ l+e ++ lk
  EPX70648.1 162 RMVSESWKKLSEQKR--QEYVKKAKDALKEYHEALK 195
                 455666666655555..7888888888887777666 PP

>> Aldedh  Aldehyde dehydrogenase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.2   7.8e-05      0.23      39      72 ..     162     195 ..     156     199 .. 0.87

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 7.8e-05
                 HHHHHHHTTS-HHHHHHHHHHHHHHHHHTHHHHH CS
      Aldedh  39 keafkawaklpaeeRaeiLrkaadlleerkeela 72 
                 +   ++w+kl+ ++R+e+++ka d+l+e +e l 
  EPX70648.1 162 RMVSESWKKLSEQKRQEYVKKAKDALKEYHEALK 195
                 556789**********************999885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1639  (0.0914161); expected 358.6 (0.02)
Passed bias filter:                      849  (0.0473534); expected 358.6 (0.02)
Passed Vit filter:                        87  (0.00485247); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.64u 0.37s 00:00:01.01 Elapsed: 00:00:00.57
# Mc/sec: 1062.06
//
Query:       EPX70649.1  [L=195]
Description: gluconokinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.9e-11   43.3   0.0      6e-11   42.7   0.0    1.2  1  AAA_33           AAA domain
    6.1e-11   42.7   0.1    1.3e-10   41.6   0.1    1.5  1  SKI              Shikimate kinase
    8.2e-09   36.1   0.1    3.8e-08   33.9   0.1    2.0  1  AAA_18           AAA domain
    1.3e-06   28.9   0.3    0.00066   20.1   0.0    2.7  3  AAA_17           AAA domain
    5.1e-06   26.4   0.0    4.1e-05   23.4   0.0    2.0  2  Cytidylate_kin   Cytidylate kinase
    5.8e-05   23.4   0.0    0.00013   22.3   0.0    1.7  1  AAA_22           AAA domain
    0.00018   22.1   0.0    0.00026   21.5   0.0    1.7  1  ABC_tran         ABC transporter
    0.00026   20.9   0.0    0.00033   20.6   0.0    1.2  1  APS_kinase       Adenylylsulphate kinase
    0.00027   20.8   0.1       0.11   12.3   0.0    2.2  2  dNK              Deoxynucleoside kinase
    0.00073   19.5   0.0     0.0014   18.6   0.0    1.5  1  Rad17            Rad17 P-loop domain
    0.00091   19.7   0.0     0.0022   18.4   0.0    1.6  1  AAA              ATPase family associated with various cellul
     0.0022   17.7   0.3       0.54    9.9   0.0    2.1  2  Thymidylate_kin  Thymidylate kinase
     0.0031   17.8   0.0       0.03   14.6   0.0    2.1  2  AAA_28           AAA domain
     0.0059   16.1   0.0      0.013   14.9   0.0    1.5  1  PhoH             PhoH-like protein
     0.0064   17.0   0.1      0.034   14.7   0.0    1.9  2  AAA_23           AAA domain
     0.0068   16.8   0.0      0.016   15.6   0.0    1.6  2  AAA_16           AAA ATPase domain
     0.0076   16.0   0.0      0.015   15.0   0.0    1.4  1  AAA_29           P-loop containing region of AAA domain
      0.009   16.4   0.0      0.021   15.2   0.0    1.7  1  RNA_helicase     RNA helicase
     0.0091   15.9   0.1      0.027   14.4   0.0    1.7  2  ATPase_2         ATPase domain predominantly from Archaea
     0.0093   16.0   0.0      0.015   15.3   0.0    1.4  1  AAA_5            AAA domain (dynein-related subfamily)
       0.01   15.6   0.6      0.018   14.7   0.0    1.7  2  AAA_24           AAA domain
       0.01   16.0   0.4       0.34   11.0   0.0    2.6  2  ADK              Adenylate kinase
  ------ inclusion threshold ------
      0.013   15.4   0.0      0.025   14.5   0.0    1.4  1  NACHT            NACHT domain
      0.014   14.7   0.2       0.11   11.8   0.0    1.9  2  Zeta_toxin       Zeta toxin
      0.018   14.1   0.0       0.34    9.9   0.0    2.4  3  T2SSE            Type II/IV secretion system protein
      0.018   15.2   0.4       0.16   12.1   0.0    2.2  2  Cytidylate_kin2  Cytidylate kinase-like family
      0.022   14.3   0.0      0.045   13.3   0.0    1.5  1  AAA_7            P-loop containing dynein motor region
      0.025   14.7   0.0      0.044   13.9   0.0    1.4  1  Sigma54_activ_2  Sigma-54 interaction domain
      0.028   14.5   0.1        0.2   11.7   0.0    2.2  3  AAA_14           AAA domain
      0.029   14.1   0.0      0.053   13.2   0.0    1.3  1  IstB_IS21        IstB-like ATP binding protein
      0.033   14.1   0.0      0.092   12.6   0.0    1.7  2  NTPase_1         NTPase
      0.036   14.2   0.1      0.085   13.0   0.0    1.7  2  AAA_2            AAA domain (Cdc48 subfamily)
      0.049   13.3   0.0      0.086   12.6   0.0    1.3  1  AAA_30           AAA domain
      0.049   14.0   0.0        1.3    9.3   0.0    2.1  2  AAA_19           AAA domain
      0.051   13.2   0.1       0.22   11.1   0.0    1.8  2  AAA_25           AAA domain
      0.057   13.3   0.0       0.11   12.4   0.0    1.4  1  RsgA_GTPase      RsgA GTPase
       0.07   13.1   0.0       0.14   12.1   0.0    1.5  1  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
      0.086   12.6   0.0       0.15   11.8   0.0    1.3  1  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
      0.089   12.5   0.0        0.2   11.4   0.0    1.5  1  PduV-EutP        Ethanolamine utilisation - propanediol utili


Domain annotation for each model (and alignments):
>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.7   0.0   1.3e-13     6e-11       1     138 [.      13     152 ..      13     155 .. 0.82

  Alignments for each domain:
  == domain 1  score: 42.7 bits;  conditional E-value: 1.3e-13
      AAA_33   1 lvllvGlpGsGKstlaerllkklgavllssdtlrrrlfgtdqqskt..dytrvldrlyqilnelarkalsag.rnvildatnlsrrerarflklarrlg 96 
                 +++++G++GsGK+t a+ l++kl++  ++ d+l+ +  +++  s    +  + + +ly++  + a +    + ++++     l+ + r+ +++ +++  
  EPX70649.1  13 VFFIIGPSGSGKTTMAKFLAEKLDYDYIEGDDLHPKANVEKMSSGHplNDEDRWGWLYNCGGACALQLDDPKvKGLVMTCSALKVAYRDVLRESLKHRP 111
                 6899*******************************8888666655411555577899*99866665554444244777788999************999 PP

      AAA_33  97 vpvrivvvetdeetlkeRlakRaangddrsevpeealdrqka 138
                   v+ +++ ++ e+l eR+++R+++   ++++  ++l +++a
  EPX70649.1 112 GSVHFLYLMASKEVLVERTKARKNHYM-KADMVDSQLRDMQA 152
                 99**********************965.46888899988887 PP

>> SKI  Shikimate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.6   0.1   2.9e-13   1.3e-10       1     155 [.      20     181 ..      20     184 .. 0.74

  Alignments for each domain:
  == domain 1  score: 41.6 bits;  conditional E-value: 2.9e-13
                 TTSSHHHHHHHHHHHHTSEEEEHHHHH..HHHHTS-HHHHHHHHHHHHHHHHHHHHHHHHCCCS...SEEEEE-TTGGGSHHHHHHHH.......HHSE CS
         SKI   1 mGaGKstvGkllAkklglefiDlDeli..ekrtgksiaeifeeegeegFrelEsevlkelleee...glViatGGGavlseenrellk.......ekgi 87 
                 +G+GK+t++k lA+kl++++i+ D+l+   +++++s  + +++e+  g+  +   + +  l+     glV  +   ++l+ ++r++l+        +  
  EPX70649.1  20 SGSGKTTMAKFLAEKLDYDYIEGDDLHpkANVEKMSSGHPLNDEDRWGWLYNCGGACALQLDDPkvkGLVMTC---SALKVAYRDVLReslkhrpGSVH 115
                 59*************************6556678999999*99988888777666665555554597788888...88888888888888889877888 PP

                 EEEEE--HHHHHHHHHHTTSSGGGCSCHHHHHHHHHHHHHHHHHCCSSCEEEECTSSHH..HHHHHHHHH CS
         SKI  88 viyLdvsleellerlkadkeRPllqekskeeelleelaereplyeeaadvvvdeseesk..eevaeeile 155
                 ++yL +s e+l+er+ka+k+   +++++ + +l++ +a   p  +e ++++++ +++++  +++a  ++e
  EPX70649.1 116 FLYLMASKEVLVERTKARKN-HYMKADMVDSQLRDMQA---PKEDEKDAYTINIENSPEvsQKIAYDLVE 181
                 ********************.45555555444444444...66666666666655555222666666555 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   0.1   8.3e-11   3.8e-08       2     120 ..      15     140 ..      15     164 .. 0.61

  Alignments for each domain:
  == domain 1  score: 33.9 bits;  conditional E-value: 8.3e-11
      AAA_18   2 lltGtpGvGKttlakeLskrlgf.gvnlrdvakenglllevdpealdeskrldedkldklldaleenssaleegknlvidghlaeleseaakdikk... 96 
                 ++ G++G+GKtt+ak L+++l +  ++  d++++ + + +   +   + + +d++   ++  +  +   +  + k  ++  + a  + ++++ +     
  EPX70649.1  15 FIIGPSGSGKTTMAKFLAEKLDYdYIEGDDLHPKANVEKMSSGH---PLNDEDRWGWLYNCGGACALQLDDPKVKG-LVMTCSALKVAYRDVLRESlkh 109
                 699*****************977644444444444444444444...44444444433333333333223333333.3333333333333333333444 PP

      AAA_18  97 .......vvLtaspeelleRlekRgyeeaki 120
                         +L as+e+l eR ++R+++  k 
  EPX70649.1 110 rpgsvhfLYLMASKEVLVERTKARKNHYMKA 140
                 5555555******************987775 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   1.4e-06   0.00066       1      30 [.      17      45 ..      17      65 .. 0.84
   2 ?    5.9   0.0     0.034        16     103     130 ..     114     141 ..      85     146 .. 0.78
   3 ?   -1.1   0.1       5.2   2.4e+03      30      69 ..     147     187 ..     141     192 .. 0.51

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 1.4e-06
                EE-TTSSHHHHHHHHHHHHTEEEEEHHHHH CS
      AAA_17  1 lGgPGsGKgtqceklvekygfthlsaGdll 30
                +G+ GsGK+t+++ l+ek+++ +++ Gd l
  EPX70649.1 17 IGPSGSGKTTMAKFLAEKLDYDYIE-GDDL 45
                59**********************9.6655 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.034
                 SEEEEEE--HHHHHHHHHHHTTST-TS- CS
      AAA_17 103 daiilleadpeeilerrlkdrtrgrddd 130
                  ++++l a++e+++er + +++   + d
  EPX70649.1 114 VHFLYLMASKEVLVERTKARKNHYMKAD 141
                 689**************99988666554 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 5.2
                 HHHHHHTTTSHSSHHHHC.TSHHHHHHHHHHHHHHHHHHHH CS
      AAA_17  30 lreeakrgglakardemr.klpleekkelqkeaaekiaeea 69 
                 lr+++++++ +k+   ++ +++ e+ +++   + eki++++
  EPX70649.1 147 LRDMQAPKEDEKDAYTINiENSPEVSQKIAYDLVEKIMKDK 187
                 55555555543332222233444555555555666666654 PP

>> Cytidylate_kin  Cytidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.0     9e-08   4.1e-05       4      53 ..      17      66 ..      15      76 .. 0.84
   2 ?    0.6   0.1      0.83   3.8e+02     134     169 ..     117     152 ..     112     187 .. 0.75

  Alignments for each domain:
  == domain 1  score: 23.4 bits;  conditional E-value: 9e-08
                    E-STTSSHHHHHHHHHHHHT-EEEEHHHHHHHHHHHHHHTT--TT-HHHH CS
  Cytidylate_kin  4 DGPagsGKssvaralaeklglkyldtgalYRalalaalrrkvdlldeaal 53
                     GP+gsGK ++a+ laekl++ y++   l        + +  +l de+ +
      EPX70649.1 17 IGPSGSGKTTMAKFLAEKLDYDYIEGDDLHPKANVEKMSSGHPLNDEDRW 66
                    5***********************99888877777777777777777766 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.83
                     EEEE--HHHHHHHHHHHHHHTT----HHHHHHHHHH CS
  Cytidylate_kin 134 ifldAsveeRakRRlkqlkakgtsvsleellaeike 169
                     ++l As e+ ++R  + +++  +++ +++ l+++++
      EPX70649.1 117 LYLMASKEVLVERTKARKNHYMKADMVDSQLRDMQA 152
                     589999999998877775555555666666666654 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   2.8e-07   0.00013       4      32 ..      10      38 ..       7     108 .. 0.83

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 2.8e-07
      AAA_22  4 tagilvvtGesGtGKTtllrrlleqldee 32
                ++ + +++G+sG+GKTt ++ l+e+ld +
  EPX70649.1 10 KKAVFFIIGPSGSGKTTMAKFLAEKLDYD 38
                567889*******************9733 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   5.6e-07   0.00026       8      40 ..       8      42 ..       6     190 .. 0.87

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 5.6e-07
                EETTSEEEEEESTTSSHHHHHHHHTTSS--..SEE CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxx RF
    ABC_tran  8 lkegekvaivGenGaGKStLlkllagllkp..teG 40
                l +  +  i+G++G+GK+t++k la++l+    eG
  EPX70649.1  8 LDKKAVFFIIGPSGSGKTTMAKFLAEKLDYdyIEG 42
                56778899*****************9987633444 PP

>> APS_kinase  Adenylylsulphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   7.2e-07   0.00033       3     126 ..      12     140 ..      10     158 .. 0.79

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 7.2e-07
                 EEEEEESSTTSSHHHHHHHHHHHHHHTT--EEEEEHHHHTTTTTTT--SSHHHHHHHHHHHH.HHHHHHHHTT-EEEEE----SH.HHHHHHHHHHHCH CS
  APS_kinase   3 vvvwltGlsgsGKstianalekkLvekgisvylLdGdnvRhgLnkdLgfseedRkenirrva.evaklladaglivlvafisPyr.eeReaarelleea 99 
                 +v+++ G sgsGK+t+a+ l++kL  + i+   L      ++++++ + ++edR+  +   +   a +l d  +  lv   s  + + R+  re l++ 
  EPX70649.1  12 AVFFIIGPSGSGKTTMAKFLAEKLDYDYIEGDDLHPKANVEKMSSGHPLNDEDRWGWLYNCGgACALQLDDPKVKGLVMTCSALKvAYRDVLRESLKHR 110
                 7899******************************99999999*************99888762667788886666666666666525677778877766 PP

                 ...TEEEEEEEE--HHHHHHHTTTSHHHHH CS
  APS_kinase 100 ...lkfievfvdtplevceerDpkglYkka 126
                    ++f+ +  + ++ v +++  k  Y ka
  EPX70649.1 111 pgsVHFLYLMASKEVLVERTKARKNHYMKA 140
                 644566666655566666666778888887 PP

>> dNK  Deoxynucleoside kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.3   0.0   0.00024      0.11       3      28 ..      16      41 ..      14      62 .. 0.88
   2 ?    6.7   0.1     0.012       5.6     109     149 ..      99     139 ..      88     192 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00024
                EEESTTSSHHHHHHHHHCCSTCEEEE CS
         dNK  3 veGnIgaGKstlvklLskklgvkvfe 28
                + G+ g+GK+t++k+L++kl++  +e
  EPX70649.1 16 IIGPSGSGKTTMAKFLAEKLDYDYIE 41
                67999***************998765 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.012
                 HHHHHHHHHHHCCH-SEEEEEE--HHHHHHHHHHCTTCCCT CS
         dNK 109 ykelldnlleelakpdlliYLkasletclerikkRgreeek 149
                 y ++l   l++ +   ++ YL as e+++er k R++++ k
  EPX70649.1  99 YRDVLRESLKHRPGSVHFLYLMASKEVLVERTKARKNHYMK 139
                 777777777777778899*****************998755 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0   3.1e-06    0.0014      41      75 ..       9      41 ..       1      59 [. 0.86

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 3.1e-06
       Rad17 41 esrkkriLLisGPsGCgkstvvkvLskelgiklre 75
                +  kk +  i GPsG gk+t+ k L+ +l ++++e
  EPX70649.1  9 D--KKAVFFIIGPSGSGKTTMAKFLAEKLDYDYIE 41
                3..4579************************9987 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   4.7e-06    0.0022       3      28 ..      16      41 ..      14      60 .. 0.88

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 4.7e-06
                EESSTTSSHHHHHHHHHHHHTHEEEE CS
         AAA  3 lyGppGtGKTllakavakelgvefle 28
                ++Gp G GKT++ak +a++l+ +++e
  EPX70649.1 16 IIGPSGSGKTTMAKFLAEKLDYDYIE 41
                79*****************9888776 PP

>> Thymidylate_kin  Thymidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.0    0.0012      0.54       3      21 ..      18      36 ..      16      41 .. 0.88
   2 ?    6.0   0.1     0.019       8.8     121     183 ..     116     173 ..      94     175 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.0012
                     ESTTSSHHHHHHHHHHHHH CS
  Thymidylate_kin  3 GlDGaGKttqaellkerlk 21
                     G  G+GKtt+a++l+e+l+
       EPX70649.1 18 GPSGSGKTTMAKFLAEKLD 36
                     778**************97 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.019
                      EEEEESSHHHHHTSCCTTSSTTTSHHHHHHHHHHHHHHHHHHHH.TTSTEEEEETTS-HHHHHH CS
  Thymidylate_kin 121 tflldvdpevalkRlakrdeldeeeeeqldflrkvrerylelak.ederiliidasksieevhe 183
                      +++l  ++ev ++R ++r+  + +  +  + lr ++    +  k +++  ++i++++s e v +
       EPX70649.1 116 FLYLMASKEVLVERTKARKNHYMKADMVDSQLRDMQ----A-PKeDEKDAYTINIENSPE-VSQ 173
                      578888*************95444444444444444....4.444889999999999998.444 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   6.6e-05      0.03       3      27 ..      15      40 ..      13      59 .. 0.88
   2 ?    1.1   0.0      0.91   4.2e+02      31      70 ..     122     160 ..      99     170 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 6.6e-05
      AAA_28  3 vitGgestGKTtlleaLaar.gypvv 27
                 i+G++++GKTt+++ La++ +y ++
  EPX70649.1 15 FIIGPSGSGKTTMAKFLAEKlDYDYI 40
                69****************98777665 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.91
      AAA_28  31 areileeklakgedalpwvedllafaervleeqleeeaaa 70 
                   e+l e+++ ++++  ++ d+++ + r +++ +e+e++a
  EPX70649.1 122 SKEVLVERTKARKNHYMKA-DMVDSQLRDMQAPKEDEKDA 160
                 5677777777777777774.88888888777777777776 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   2.9e-05     0.013      15      40 ..       7      32 ..       3      37 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 2.9e-05
                HHHH-SEEEEE--TTSSTTHHHHHHH CS
        PhoH 15 alkkndivfaiGpaGtGKtylavala 40
                 l+k+ + f+iGp+G+GKt +a  la
  EPX70649.1  7 HLDKKAVFFIIGPSGSGKTTMAKFLA 32
                688999***************98776 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   7.4e-05     0.034      19      39 ..      11      31 ..       2      37 .. 0.86
   2 ?    0.3   0.1       1.9   8.5e+02     111     129 ..     146     169 ..      88     194 .. 0.47

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 7.4e-05
      AAA_23 19 kgltlItGpNGaGKTTildAi 39
                k ++ I+Gp G+GKTT   ++
  EPX70649.1 11 KAVFFIIGPSGSGKTTMAKFL 31
                5699************98776 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 1.9
      AAA_23 111 llei.....deleqfisellgskk 129
                 +l++     ++ ++  + +++++ 
  EPX70649.1 146 QLRDmqapkEDEKDAYTINIENSP 169
                 222222222222222222222222 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   3.4e-05     0.016      26      52 ..      13      39 ..       4      60 .. 0.85
   2 ?   -2.0   0.0       8.6     4e+03     100     100 ..     156     156 ..     100     190 .. 0.58

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 3.4e-05
      AAA_16 26 lvllsGesGvGKsslvrellralekdg 52
                + +++G+sG+GK+++++ l++ l  d+
  EPX70649.1 13 VFFIIGPSGSGKTTMAKFLAEKLDYDY 39
                5689****************9999883 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 8.6
      AAA_16 100 k 100
                  
  EPX70649.1 156 D 156
                 0 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   3.4e-05     0.015      19      38 ..       8      27 ..       3      28 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 3.4e-05
      AAA_29 19 idlkgatlltGpsGsGKSTl 38
                +d k +++++GpsGsGK+T+
  EPX70649.1  8 LDKKAVFFIIGPSGSGKTTM 27
                5555689************7 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   4.5e-05     0.021       2      26 ..      15      39 ..      14      75 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 4.5e-05
  RNA_helicase  2 wlyGpsgeGKStlakeLakallkkl 26
                  ++ Gpsg GK+t+ak La++l  ++
    EPX70649.1 15 FIIGPSGSGKTTMAKFLAEKLDYDY 39
                  689***************9998554 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   5.9e-05     0.027      19      48 ..      10      38 ..       6      48 .. 0.85
   2 ?   -1.1   0.1       3.2   1.5e+03      88      88 ..     157     157 ..     102     194 .. 0.46

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 5.9e-05
    ATPase_2 19 pneiyfiYGpegsGKtaLlkeiienledkd 48
                ++ + fi Gp gsGKt++ k ++e+l d+d
  EPX70649.1 10 KKAVFFIIGPSGSGKTTMAKFLAEKL-DYD 38
                57899*************99999888.444 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 3.2
    ATPase_2  88 k 88 
                 +
  EPX70649.1 157 E 157
                 1 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   3.3e-05     0.015       2      25 ..      14      37 ..      13      58 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 3.3e-05
                EEEE--SSSSHHHHHHHGGGGBS- CS
       AAA_5  2 vlLvGppGtgKselaerlaaalnr 25
                ++++Gp+G+gK+++a+ la+ l  
  EPX70649.1 14 FFIIGPSGSGKTTMAKFLAEKLDY 37
                689*****************9954 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0     4e-05     0.018       2      22 ..      11      31 ..      10      44 .. 0.86
   2 ?   -1.4   0.1       3.5   1.6e+03     146     146 ..     159     159 ..     103     194 .. 0.63

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 4e-05
      AAA_24  2 klkiliyGpsgiGKTtlakel 22
                k+ ++i+Gpsg+GKTt+ak l
  EPX70649.1 11 KAVFFIIGPSGSGKTTMAKFL 31
                78899*************976 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 3.5
      AAA_24 146 t 146
                 +
  EPX70649.1 159 D 159
                 2 PP

>> ADK  Adenylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.0   0.00075      0.34       1      38 [.      16      53 ..      16      63 .. 0.81
   2 ?    1.9   0.2      0.47   2.2e+02      48      73 ..     164     189 ..     133     195 .] 0.65

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00075
                EEESTTSSHHHHHHHHHHHHTSEEEEHHHHHHHHHHCT CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         ADK  1 llGaPgaGKGtqaeklvkkyglahlstGdllRaevksg 38
                ++G+ g+GK t a+ l++k+ +  +   dl  ++  ++
  EPX70649.1 16 IIGPSGSGKTTMAKFLAEKLDYDYIEGDDLHPKANVEK 53
                79********************9999888876555444 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.47
                 HHHTTSS--HHHHHHHHHHHHHCHGT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx RF
         ADK  48 vmdkgelvpdevvvklvkeelekedk 73 
                  ++++  v++++  +lv++ ++++d+
  EPX70649.1 164 NIENSPEVSQKIAYDLVEKIMKDKDE 189
                 46677777777777777777776643 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   5.5e-05     0.025       3      31 ..      14      42 ..      12      47 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 5.5e-05
                EEEEC-TTTCHHHHHHHHHHHHCTS-SCC CS
       NACHT  3 vilqGeaGsGKTtLlqklalawaegklpq 31
                 ++ G++GsGKTt+++ la+++  ++ ++
  EPX70649.1 14 FFIIGPSGSGKTTMAKFLAEKLDYDYIEG 42
                689*****************998777766 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00024      0.11      12      41 ..       6      36 ..       2      56 .. 0.81
   2 ?    0.9   0.1      0.51   2.3e+02     116     186 ..     106     185 ..      91     194 .. 0.66

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00024
  Zeta_toxin 12 sq.erPklillgGqpGAGKselaellkdele 41
                +  +++++ ++ G +G+GK+++a+ l+++l+
  EPX70649.1  6 QHlDKKAVFFIIGPSGSGKTTMAKFLAEKLD 36
                5557899999******************994 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.51
  Zeta_toxin 116 alkkaGYevevvvvavkkelSrlgvldRyeeevae......gR..lvpkeehdeafeglresvealeeekqldrvk.ikd 186
                 +lk++  +v+ ++++++ke+ ++++++R    +++       R   +pke  ++a++   e+  ++ ++ + d v+ i++
  EPX70649.1 106 SLKHRPGSVHFLYLMASKEVLVERTKARKNHYMKAdmvdsqLRdmQAPKEDEKDAYTINIENSPEVSQKIAYDLVEkIMK 185
                 56666667888888999999999999998777444456665342245666666677666666666666666666665544 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0   0.00074      0.34     127     153 ..       9      35 ..       4      41 .. 0.82
   2 ?    1.3   0.0      0.31   1.4e+02     179     201 ..      88     112 ..      75     116 .. 0.73
   3 ?   -2.3   0.0         4   1.8e+03      34      63 ..     163     192 ..     134     194 .. 0.68

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00074
       T2SSE 127 rerglilvsGgTgsGKttllyallkei 153
                  ++ ++ + G+ gsGKtt++  l +++
  EPX70649.1   9 DKKAVFFIIGPSGSGKTTMAKFLAEKL 35 
                 67889999**********998777665 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.31
       T2SSE 179 lnak..kakvtfadllraaLRlrPD 201
                 l+    + kv ++d+lr++L +rP 
  EPX70649.1  88 LVMTcsALKVAYRDVLRESLKHRPG 112
                 44444468999*************6 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 4
       T2SSE  34 ielreveelekaalerlisriaalakldis 63 
                 i++++ +e++++ +  l+++i+    +di+
  EPX70649.1 163 INIENSPEVSQKIAYDLVEKIMKDKDEDIK 192
                 345556666666677777777666666665 PP

>> Cytidylate_kin2  Cytidylate kinase-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00034      0.16       8      30 ..      20      42 ..      16      56 .. 0.88
   2 ?    0.8   0.2         1   4.8e+02     109     148 ..     107     149 ..     104     185 .. 0.60

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00034
  Cytidylate_kin2  8 yGsgGetigeaLAekLglpfydr 30
                      Gsg++t+++ LAekL +++++ 
       EPX70649.1 20 SGSGKTTMAKFLAEKLDYDYIEG 42
                     6******************9975 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 1
  Cytidylate_kin2 109 Lkdrpnvlrv.fltapledrvkrvaeregl..seeearekike 148
                      Lk+rp  +++ +l a++e+ v+r ++r++   +++ + +++++
       EPX70649.1 107 LKHRPGSVHFlYLMASKEVLVERTKARKNHymKADMVDSQLRD 149
                      5666666665368888888888877666443344444444443 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   9.8e-05     0.045      28      60 ..       6      38 ..       2      49 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 9.8e-05
       AAA_7 28 lllknkkpvllvGptGtGKtviikdllkkldke 60
                ++l++k  ++++Gp+G+GKt+++k l +kld +
  EPX70649.1  6 QHLDKKAVFFIIGPSGSGKTTMAKFLAEKLDYD 38
                57788889999*************999999944 PP

>> Sigma54_activ_2  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   9.6e-05     0.044      20      43 ..      10      33 ..       6      48 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 9.6e-05
                     -SS-EEEEEETT--HHHHHHCC-- CS
  Sigma54_activ_2 20 sklpvfltGekGsgkelvArlLhk 43
                     +k++ f++G+ Gsgk+++A++L++
       EPX70649.1 10 KKAVFFIIGPSGSGKTTMAKFLAE 33
                     67889*****************97 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00043       0.2       3      42 ..      12      46 ..      10      62 .. 0.75
   2 ?   -2.0   0.0       7.5   3.5e+03      95     122 ..      88     116 ..      80     126 .. 0.65
   3 ?   -0.5   0.2       2.6   1.2e+03      29      43 ..     156     170 ..     120     194 .. 0.54

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00043
      AAA_14  3 kilvitGaRrvGKTtllkqlikellvkkesilyinldder 42
                 + +i G+  +GKTt++k l+++l      + yi+ dd +
  EPX70649.1 12 AVFFIIGPSGSGKTTMAKFLAEKLD-----YDYIEGDDLH 46
                5789************877775554.....6677766654 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 7.5
      AAA_14  95 vivtGSnskllskei.atslagrvaeiel 122
                 +++t S++k+ ++++ ++sl  r  +++ 
  EPX70649.1  88 LVMTCSALKVAYRDVlRESLKHRPGSVHF 116
                 57788888888876515777777666654 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 2.6
      AAA_14  29 kkesilyinldderd 43 
                 ++++   in+++ ++
  EPX70649.1 156 DEKDAYTINIENSPE 170
                 334444444444444 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   0.00012     0.053      42      70 ..       6      34 ..       3      40 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 0.00012
   IstB_IS21 42 sfiekkenivllGpsGvGKshlaialgve 70
                ++++kk+ + ++GpsG GK+ +a  l+ +
  EPX70649.1  6 QHLDKKAVFFIIGPSGSGKTTMAKFLAEK 34
                67899******************988865 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0    0.0002     0.092       2      24 ..      14      36 ..      13      42 .. 0.89
   2 ?   -1.8   0.0       5.4   2.5e+03      65      81 ..     152     168 ..     122     189 .. 0.59

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.0002
                EEEE--TTSSHHHHHHHHHHHH. CS
    NTPase_1  2 vfiTGppGvGKtTlvkkvlellk 24
                +fi Gp+G+GKtT+ k ++e+l+
  EPX70649.1 14 FFIIGPSGSGKTTMAKFLAEKLD 36
                7999****************995 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 5.4
                 ---SSEETTEEE-HHHH CS
    NTPase_1  65 akreprvgkyvvdvesf 81 
                 a++e + + y++++e+ 
  EPX70649.1 152 APKEDEKDAYTINIENS 168
                 44444555555555552 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   0.00018     0.085       2      29 ..      10      37 ..       9      58 .. 0.85
   2 ?   -2.0   0.1       7.1   3.3e+03      39      39 ..     149     149 ..     117     188 .. 0.57

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 0.00018
                ----EEEE--TTSSHHHHHHHHHHHTT- CS
       AAA_2  2 piisilllgptgvGktelakalaellfv 29
                +++ + ++gp+g+Gkt +ak lae l+ 
  EPX70649.1 10 KKAVFFIIGPSGSGKTTMAKFLAEKLDY 37
                78999*******************9986 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 7.1
                 E CS
       AAA_2  39 d 39 
                 d
  EPX70649.1 149 D 149
                 2 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   0.00019     0.086      17      41 ..      10      34 ..       5      41 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00019
      AAA_30 17 gdrvavltGpAGtGKttalkalrea 41
                ++ v ++ Gp G+GKtt+ k l+e 
  EPX70649.1 10 KKAVFFIIGPSGSGKTTMAKFLAEK 34
                456999************9998875 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.0    0.0029       1.3       9      30 ..      10      31 ..       6      39 .. 0.82
   2 ?    2.7   0.1      0.32   1.5e+02      90     129 ..     146     187 ..      74     191 .. 0.66

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.0029
      AAA_19  9 kekvllvtaGpGtGKTrvlkhi 30
                k+ v++++++ G+GKT++ k  
  EPX70649.1 10 KKAVFFIIGPSGSGKTTMAKFL 31
                567899***********97765 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.32
      AAA_19  90 lle.eaeeekklqeeellivDEfqdvd.elqyrLlkallgek 129
                  l+  ++ +++ ++++++ +  + +v+ + +y L+++++++k
  EPX70649.1 146 QLRdMQAPKEDEKDAYTINIENSPEVSqKIAYDLVEKIMKDK 187
                 122312334444577899999999**99999*****999877 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00047      0.22      27      50 ..       5      28 ..       2      35 .. 0.88
   2 ?   -0.1   0.0       1.3   6.1e+02      54      97 ..      94     137 ..      54     180 .. 0.61

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00047
      AAA_25 27 kgllpagelallaGapgtGKttla 50
                + +l ++++  ++G++g+GKtt+a
  EPX70649.1  5 PQHLDKKAVFFIIGPSGSGKTTMA 28
                67999*****************98 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 1.3
      AAA_25  54 alavatGkpwlgpvapeqgkVlyvsaEdsedelrrRlravgeal 97 
                 al+va  + + +++++++g V ++ +  s + l +R +a   ++
  EPX70649.1  94 ALKVAYRDVLRESLKHRPGSVHFLYLMASKEVLVERTKARKNHY 137
                 44444222122244445555555444444444555555444444 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   0.00024      0.11      97     124 ..       8      36 ..       3      55 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00024
                  CTT.SEEEEECSTTSSHHHHHHHHCTT-- CS
  RsgA_GTPase  97 lkd.ktsvlvGqSGvGKStLinallpele 124
                  l++  + +++G+SG GK+t+ + l+++l+
   EPX70649.1   8 LDKkAVFFIIGPSGSGKTTMAKFLAEKLD 36 
                  5553677889************9998865 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00031      0.14      19      46 ..      11      38 ..       2      42 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00031
                TEEEEEEESTTSSHHHHHHHHHHHTT-- CS
        TsaE 19 gdvilLeGdLGaGKTtlvrglakalgve 46
                ++v+++ G+ G+GKTt+++ la++l+++
  EPX70649.1 11 KAVFFIIGPSGSGKTTMAKFLAEKLDYD 38
                5678999****************99876 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00033      0.15      37      59 ..      15      37 ..       5      44 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00033
      RuvB_N 37 llyGpPGlGkttlakiiakelgv 59
                +++Gp G Gktt+ak +a++l+ 
  EPX70649.1 15 FIIGPSGSGKTTMAKFLAEKLDY 37
                678****************9976 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00043       0.2       5      28 ..      15      37 ..      10      46 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00043
   PduV-EutP  5 lliGkvgsGKttLtqalkgeelkY 28
                ++iG++gsGKtt+++ l + +l Y
  EPX70649.1 15 FIIGPSGSGKTTMAKFLAE-KLDY 37
                579***********99964.5555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       861  (0.0480228); expected 358.6 (0.02)
Passed bias filter:                      553  (0.0308439); expected 358.6 (0.02)
Passed Vit filter:                       115  (0.00641419); expected 17.9 (0.001)
Passed Fwd filter:                        39  (0.00217525); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              39  [number of targets reported over threshold]
# CPU time: 0.71u 0.36s 00:00:01.06 Elapsed: 00:00:00.58
# Mc/sec: 1014.38
//
Query:       EPX70650.1  [L=301]
Description: retromer complex subunit Vps26 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.8e-127  424.0   4.8   2.1e-127  423.9   4.8    1.0  1  Vps26       Vacuolar protein sorting-associated protein 26
     0.0032   17.5   3.7       0.17   12.0   0.1    3.2  3  Arrestin_N  Arrestin (or S-antigen), N-terminal domain


Domain annotation for each model (and alignments):
>> Vps26  Vacuolar protein sorting-associated protein 26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  423.9   4.8  2.3e-131  2.1e-127       1     275 []       5     279 ..       5     279 .. 0.99

  Alignments for each domain:
  == domain 1  score: 423.9 bits;  conditional E-value: 2.3e-131
                 TTTSEEEEEEETTTTTS-EEEEE-GGG-EEEEEEE-TT--EEEEEEEEESST--EEESEEEEEEEEEEEETTTGGGEEEEEEEEEEEE-SEEESS-EEE CS
       Vps26   1 fkttidieikldneeerktvdvktekgkkeklkvyedgeslsGvvtirlkdskkvehqGikveliGqiellydkgnsvdfislvkdlakpGelqesksf 99 
                 f++++d++i+ldneeer +vd++ e+g+k+k++vy ++es++G v+irlkd++k++h+Gik+e++G ie++ydkgn ++f+++v++la+pGe+++++++
  EPX70650.1   5 FRSPVDVDIRLDNEEERSFVDIEFEHGRKDKAPVYGSDESVKGAVMIRLKDGRKLDHNGIKIEFVGCIENTYDKGNVHEFTRSVQELASPGEMRQAQMY 103
                 7899*********************************************************************************************** PP

                 EEEETS----S--EE-SSEEEEEEEEEEEE-SSS-EEEEEEEEE---B---S----EEEEEEETTTEEEEEEES-SEEETT-EEEEEEEEEEE-S-EEE CS
       Vps26 100 pfefkklekryesYkGknvklrYvlrvtvvRklkditkekdlivhefttaPevnksvklevGiedclhiefeyskskyhLkdvivGkiyfllvrikiks 198
                 +fefk++ek+yesY GknvklrY++rvtv+Rk+ d+++ekdl+v++++++Pe+ + +k++vGi+dclhiefeysk+kyhL+dvivGkiyf+lvrik+++
  EPX70650.1 104 EFEFKHVEKPYESYFGKNVKLRYFCRVTVTRKMADVIREKDLWVYRYENEPETSNLIKMDVGIDDCLHIEFEYSKNKYHLRDVIVGKIYFILVRIKVQR 202
                 *************************************************************************************************** PP

                 EEEEEEEEEEESSTTCEEEEEEEEEEEEEEES---TT-EEEEEEEGGGG-----EEEETTTEEEEEEEEEEEEETTS CS
       Vps26 199 melslikrestGlaenvakdsetiakyeimDGasvrgesiPirlflsgydltPtlrdvnkkfsvkyylnlvlvdedd 275
                 me+++i+re++G+ +n++++se ++++++mDG+++rge+iP+r+fl+gy ltPt+rdvnkkf+v+yyl+l+l+ded+
  EPX70650.1 203 MEVNIIRRETIGTPPNQYSNSEIVTRFQVMDGNPNRGETIPLRMFLNGYSLTPTFRDVNKKFNVRYYLSLILIDEDQ 279
                 ***************************************************************************96 PP

>> Arrestin_N  Arrestin (or S-antigen), N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   0.1   1.9e-05      0.17       7      52 ..      34      81 ..      24     101 .. 0.76
   2 !    4.4   0.1     0.004        36      94     127 ..     103     136 ..     100     149 .. 0.83
   3 ?    0.2   0.0     0.081   7.3e+02       2      28 ..     171     197 ..     170     214 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1.9e-05
                -SEEEEETT--EEEEEEE-CC..CCTT.CEEEEEEEEEEEESSSSTTT CS
  Arrestin_N  7 krdevyhpgetvdGkvllete..elkkarkvkielsgkartgweesev 52
                 + +vy ++e+v+G v+++ +  ++++ +++kie+ g ++ + ++ +v
  EPX70650.1 34 DKAPVYGSDESVKGAVMIRLKdgRKLDHNGIKIEFVGCIENTYDKGNV 81
                4678**************77622578889*******998877665554 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.004
                 EEEEE---TTS--SECSGEEEEEEEEEEEEECCC CS
  Arrestin_N  94 fpFsfelPknlpsSfeGkaggvrYevkvtldrpw 127
                 + F f+  ++   S  Gk  + rY+++vt++r+ 
  EPX70650.1 103 YEFEFKHVEKPYESYFGKNVKLRYFCRVTVTRKM 136
                 7788888888888999**************9986 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.081
                 EEEES-SEEEEETT--EEEEEEE-CCC CS
  Arrestin_N   2 tieldkrdevyhpgetvdGkvlletee 28 
                 +ie++ +++ yh  + + Gk+ +   +
  EPX70650.1 171 HIEFEYSKNKYHLRDVIVGKIYFILVR 197
                 6899999999**********9876655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (301 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       424  (0.0236488); expected 358.6 (0.02)
Passed bias filter:                      306  (0.0170673); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.35s 00:00:00.97 Elapsed: 00:00:00.56
# Mc/sec: 1616.33
//
Query:       EPX70651.1  [L=220]
Description: Mvp17/PMP22 family protein 2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.4e-21   75.7   3.3    4.2e-21   74.9   3.3    1.4  1  Mpv17_PMP22  Mpv17 / PMP22 family


Domain annotation for each model (and alignments):
>> Mpv17_PMP22  Mpv17 / PMP22 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.9   3.3   2.3e-25   4.2e-21       1      62 []     150     211 ..     150     211 .. 0.98

  Alignments for each domain:
  == domain 1  score: 74.9 bits;  conditional E-value: 2.3e-25
  Mpv17_PMP22   1 gllegksleeikeelkekfwptlkanwkvWppaqlinFyfvPlkfRvlfvnvvslgWntyLS 62 
                  g++e ks ++ik+ +k+++ ptlkan+++Wp+aq+inF f+P  f+v+fvn+++++W+tyLS
   EPX70651.1 150 GITECKSTDKIKTFFKKNYYPTLKANYVLWPAAQFINFNFIPFVFQVVFVNAMAMVWTTYLS 211
                  68999********************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       585  (0.0326287); expected 358.6 (0.02)
Passed bias filter:                      273  (0.0152267); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.32s 00:00:00.89 Elapsed: 00:00:00.54
# Mc/sec: 1228.44
//
Query:       EPX70652.1  [L=345]
Description: ketoreductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.5e-37  129.0   0.1    3.1e-37  128.0   0.0    1.5  2  adh_short        short chain dehydrogenase
    1.6e-21   76.9   0.0    2.5e-21   76.3   0.0    1.2  1  adh_short_C2     Enoyl-(Acyl carrier protein) reductase
    2.2e-06   27.7   0.1    6.6e-06   26.1   0.1    1.7  1  KR               KR domain
  ------ inclusion threshold ------
      0.028   13.5   0.2       0.04   13.1   0.2    1.2  1  Polysacc_synt_2  Polysaccharide biosynthesis protein
      0.031   14.2   0.1      0.051   13.5   0.1    1.4  1  NAD_binding_10   NAD(P)H-binding
      0.057   14.0   0.1       0.12   12.9   0.1    1.5  1  F420_oxidored    NADP oxidoreductase coenzyme F420-dependent
        0.1   12.9   0.0       0.22   11.9   0.0    1.5  1  INTAP            Intersectin and clathrin adaptor AP2 binding
       0.11   12.5   0.0       0.24   11.4   0.0    1.6  1  ADH_zinc_N       Zinc-binding dehydrogenase


Domain annotation for each model (and alignments):
>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.0   0.0   1.4e-40   3.1e-37       2     188 ..      59     255 ..      58     260 .. 0.92
   2 ?   -2.9   0.0       1.8     4e+03      48      62 ..     314     328 ..     296     341 .. 0.48

  Alignments for each domain:
  == domain 1  score: 128.0 bits;  conditional E-value: 1.4e-40
                 EEEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHT.TSEEEEEE-TTTSHHHHHHHHHHHHHHH..SSESEEEE---S..S--SSGGG CS
   adh_short   2 vvlvtGassGIGraiakelakeGakvvvvdrseekleevakelkee.gakalaiqvDvtdreevealvekavkkl..gkldvLvnNAGi..tgsgpfse 95 
                 +++vtGa++GIG+++a +la++G+++v+v+r++ekl ++a+el+   + +  +i++D +++++v   +ek+ ++l   ++ vL+nN+G     +++f+e
  EPX70652.1  59 WAVVTGATDGIGKEYAIQLATSGFNIVLVSRTQEKLTALAQELETVaKIQTRTIALDYSKANKV--SFEKVTEELkdLPITVLINNVGQshVMPTSFEE 155
                 69*******************************************9899999999999977766..488999999666899********766778899* PP

                 CSHHHHHHHHHHHTHHHHHHHHHHHHHHH.......HCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHHH CS
   adh_short  96 lseeewervievNltgvflltravlpaml.......kqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdma 187
                 + e+e+++++++N +g++++t+a+lp m        k+ +  I +++S ag+ p++ ++ Y+ sKa++  ++ s+a+e++p+gi v + +  lv + m 
  EPX70652.1 156 TPETEMDNIMHINCFGTLHTTKAILPIMTeqrrkdkKGPRCLILTMGSFAGLIPSPYLSTYAGSKAFLSNWSASMAEEVKPEGIDVWCYNSYLVVSSMS 254
                 ****************************99999776777789***********************************************9999999987 PP

                 H CS
   adh_short 188 k 188
                 k
  EPX70652.1 255 K 255
                 6 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.8
                 TSEEEEEE-TTTSHH CS
   adh_short  48 gakalaiqvDvtdre 62 
                  +++ a+++Dv++r+
  EPX70652.1 314 VNQVAAMHLDVRKRA 328
                 234444444444444 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.3   0.0   1.1e-24   2.5e-21       1     175 [.      64     250 ..      64     271 .. 0.86

  Alignments for each domain:
  == domain 1  score: 76.3 bits;  conditional E-value: 1.1e-24
                   TTTTSHHHHHHHHHHHTT-EEEEEESSGGH.HHHHHHHHHHTT..SEEEE--TTSHHHHHHHHHHHHHHH..SSEEEEEE-----EGCSS-GGGH-H CS
  adh_short_C2   1 GaasgIGraiAkalaeeGaevvltdlneea.kkrveelaeelg..aevlecDVtdeeqvealveevvekf..gklDilvnnagiapklkgpfletsr 92 
                   Ga  gIG++ A +la  G ++vl+ + +e+  + ++el++  +  ++ +++D ++ ++v   +e+v+e++    + +l+nn+g ++ + ++f+et++
    EPX70652.1  64 GATDGIGKEYAIQLATSGFNIVLVSRTQEKlTALAQELETVAKiqTRTIALDYSKANKVS--FEKVTEELkdLPITVLINNVGQSHVMPTSFEETPE 158
                   899***********************9999666666665544421446999999988774..8888888833357899******************* PP

                   HHHHHHHHHHTHHHHHHHHHHHHHCTSC.........CEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BH CS
  adh_short_C2  93 eefdraldvnlyslfllakaalplmkeg.........gsivnlssvgaervvpnynaygaaKaalealtrylAvelgpkgiRvNavspgpik 175
                    e+d+++++n+ ++++++ka+lp+m+e+           i+++ s+++ +  p  + y+ +Ka l + + ++A e+ p+gi v +    ++ 
    EPX70652.1 159 TEMDNIMHINCFGTLHTTKAILPIMTEQrrkdkkgprCLILTMGSFAGLIPSPYLSTYAGSKAFLSNWSASMAEEVKPEGIDVWCYNSYLVV 250
                   ***********************9999888888766556******************************************99876666665 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.1     3e-09   6.6e-06       3     163 ..      60     230 ..      58     239 .. 0.73

  Alignments for each domain:
  == domain 1  score: 26.1 bits;  conditional E-value: 3e-09
                 EEEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHT.T-EEEE----TT-HHHH..HHHHHHHHHHSS---EEEE---..------ CS
          KR   3 ylitGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaeleal.gaevevvaaDvsdkdav..ealleeikaeeppikGvihaAg..vlrdkl 96 
                  ++tG++ g+G+e a +la +g  ++vl+sR+   +e+ +al +ele    ++ +++a+D s++++v  e++ ee+k  + pi+  i+  g  +++ + 
  EPX70652.1  60 AVVTGATDGIGKEYAIQLATSGF-NIVLVSRT---QEKLTALAQELETVaKIQTRTIALDYSKANKVsfEKVTEELK--DLPITVLINNVGqsHVMPTS 152
                 68*******************96.7*******...445556777777755678888888888877762256666665..35788888877622445788 PP

                 TTT--HHHHHHHHTTTTHHHHHHHHHTTT...........S--SEEEEEEEHHHHH--TT-HHHHHHHHHHHHHHHHH CS
          KR  97 leemtaedleqvlapKvkGawnLhelled...........esldffvlfSSiagllgsagqanYaaaNaflDalaeyr 163
                 +ee+ + +++++++  + G+ +  +++ +            +  +++++ S agl+ s+  ++Ya   afl  + ++ 
  EPX70652.1 153 FEETPETEMDNIMHINCFGTLHTTKAILPimteqrrkdkkGPRCLILTMGSFAGLIPSPYLSTYAGSKAFLSNWSASM 230
                 999999999999999999998877776655555554444333446777889999999999999999888887766655 PP

>> Polysacc_synt_2  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.2   1.8e-05      0.04       2      90 ..      61     148 ..      60     184 .. 0.61

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.8e-05
                      EEETTTSHHHHHHHHHHHHHB-SEEEEEES-HHHHHHHHHH......-TTEEEE....E--TT-HHHHHHHTT..T-SEEEE------H CS
  Polysacc_synt_2   2 lvtGagGsiGselvrqilkkkpkkiillerdElklyeiekeleeelkkkklkveivpvigdvrdkerlekaleelkvdvvfhaAAlKhV 90 
                      +vtGa+  iG+e   q++++   +i+l++r+  kl ++++ele+ +k ++ ++ +    ++    e++++ l++l + v+++     hV
       EPX70652.1  61 VVTGATDGIGKEYAIQLATSGF-NIVLVSRTQEKLTALAQELETVAKIQTRTIALDYSKANKVSFEKVTEELKDLPITVLINNVGQSHV 148
                      69**************988776.6999999999********854333222212211222222233444444555555555555555555 PP

>> NAD_binding_10  NAD(P)H-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.1   2.3e-05     0.051       1      44 [.      64     105 ..      64     122 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 2.3e-05
                     TTTSHHHHHHHHHHHHC-T-EEEEEETTHHHCHHHHCTTTCEEE CS
  NAD_binding_10   1 GAtGkvGrllvkellargghevtalvRnpeklaeleaeeglevv 44 
                     GAt ++G++ + +l+ + g++++++ R++ekl++l++ e  +v 
      EPX70652.1  64 GATDGIGKEYAIQLATS-GFNIVLVSRTQEKLTALAQ-ELETVA 105
                     9****************.5**************9973.444444 PP

>> F420_oxidored  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   5.6e-05      0.12      10      52 ..      69     107 ..      63     128 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 5.6e-05
                    HHHHHHHHHHHTTS-GGCEEEEEESSCCCHHHHHHHHC..-EEEC CS
  F420_oxidored  10 mgealasgllaagaqpheivvansrnpekaeelaeelg..vkvta 52 
                    +g+  a +l+++g    +iv++ sr++ek+++la+el+  +  + 
     EPX70652.1  69 IGKEYAIQLATSG---FNIVLV-SRTQEKLTALAQELEtvA--KI 107
                    68888999*****...****88.**************9542..32 PP

>> INTAP  Intersectin and clathrin adaptor AP2 binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   9.7e-05      0.22      50      93 ..     221     264 ..     189     270 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 9.7e-05
       INTAP  50 dfsstwptnssekaesdnwdawaaqpsltvpsaGqlrqrsaftp 93 
                  f s+w ++ +e+ + ++ d w  +  l v s  ++r+    tp
  EPX70652.1 221 AFLSNWSASMAEEVKPEGIDVWCYNSYLVVSSMSKIRRPNFTTP 264
                 5999*****************************99996554445 PP

>> ADH_zinc_N  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00011      0.24       5      76 ..      73     153 ..      68     159 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00011
                 HHHHHHHHTT-EEEEEESSHHHH.HHHHHTTESEEEET.........TTC.HHHHHHHHHTTTSSEEEEEESSCSHHHHHHHH CS
  ADH_zinc_N   5 aavqlAkalGaeviavdsseekl.elakklGadeviny.........kea.dlverikeltggegvdvvfecvGsgatleaal 76 
                 +a+qlA  +G++++ v++++ekl +la++l   + i +          ++ ++++  +el  + ++ v ++ vG+ +++++++
  EPX70652.1  73 YAIQLA-TSGFNIVLVSRTQEKLtALAQELETVAKIQTrtialdyskANKvSFEKVTEELK-DLPITVLINNVGQSHVMPTSF 153
                 577777.58**************87888898555455557777777633335777777777.788*********999998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (345 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       596  (0.0332422); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.53u 0.29s 00:00:00.82 Elapsed: 00:00:00.47
# Mc/sec: 2185.01
//
Query:       EPX70653.1  [L=189]
Description: 60S ribosomal protein L9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.7e-34  117.7   1.8      1e-18   67.8   0.1    2.1  2  Ribosomal_L6  Ribosomal protein L6
  ------ inclusion threshold ------
      0.036   14.5   0.1        7.5    7.1   0.0    2.3  2  HMA           Heavy-metal-associated domain


Domain annotation for each model (and alignments):
>> Ribosomal_L6  Ribosomal protein L6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.8   0.1   1.1e-22     1e-18       1      76 []      13      85 ..      13      85 .. 0.98
   2 !   49.7   0.1   4.8e-17   4.3e-13       1      76 []      97     176 ..      97     176 .. 0.97

  Alignments for each domain:
  == domain 1  score: 67.8 bits;  conditional E-value: 1.1e-22
                  CSTTEEEEEETTTEEEEEESSEEEEEE-CTTSEEEEEECSTEEEEEECSESCHHHHHHHHHHHHHHHHHHHHHHTC CS
  Ribosomal_L6  1 iPvgvrvsikggqlvlvlGpkgeltreipegvtvevkvegnkvtvivvsgidkekvAligtvrslinnmikGVteg 76
                  iP+gv+v ik  ++v+v+Gp+g+l+ ++++  ++e+k++gn +++iv++g++ +++ +i+tv s+innm+ GVt+g
    EPX70653.1 13 IPKGVTVDIKA-RNVTVTGPRGSLSKSLRHI-DLEMKKQGNAIKFIVWHGSRLHNA-CIRTVYSIINNMMIGVTQG 85
                  8*********7.******************7.************************.*****************98 PP

  == domain 2  score: 49.7 bits;  conditional E-value: 4.8e-17
                   CSTTEEEEEET..TTEEEEEESSEEEEEE-CTTSEEEEEECSTEEEEEECSESCHHHH....HHHHHHHHHHHHHHHHHHTC CS
  Ribosomal_L6   1 iPvgvrvsikg..gqlvlvlGpkgeltreipegvtvevkvegnkvtvivvsgidkekv....AligtvrslinnmikGVteg 76 
                   +P++ + s +g  ++++++lG++ ++ +++ +gvtv   +  n++++ +++g++ e+v    A+i++++ + n++i+++ +g
    EPX70653.1  97 FPININLSENGsvVEIRNFLGERITRVIKCLPGVTVS--MSSNVKDELIIEGNSLENVsqsaANIKQICNVRNKDIRKFLDG 176
                   89***********************************..55**************************************998 PP

>> HMA  Heavy-metal-associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0    0.0031        27      29      43 ..      17      34 ..      11      54 .. 0.74
   2 ?    7.1   0.0   0.00083       7.5      15      46 ..     119     150 ..     117     164 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0031
         HMA 29 vkvdlatktvtVeg...d 43
                v+vd +++ vtV+g   +
  EPX70653.1 17 VTVDIKARNVTVTGprgS 34
                89***********97552 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.00083
         HMA  15 kvekvLselpgVesvkvdlatktvtVegdaes 46 
                 ++++v++ lpgV+    +++++++ +eg+  +
  EPX70653.1 119 RITRVIKCLPGVTVSMSSNVKDELIIEGNSLE 150
                 8***********99999999999999997654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       547  (0.0305092); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.28s 00:00:00.71 Elapsed: 00:00:00.44
# Mc/sec: 1294.86
//
Query:       EPX70654.1  [L=388]
Description: ribosomal protein subunit S5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.2e-23   80.6   0.0      7e-23   79.9   0.0    1.4  1  Ribosomal_S5_C  Ribosomal protein S5, C-terminal domain
    1.2e-17   63.6   0.3    2.4e-17   62.7   0.3    1.5  1  Ribosomal_S5    Ribosomal protein S5, N-terminal domain


Domain annotation for each model (and alignments):
>> Ribosomal_S5_C  Ribosomal protein S5, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.9   0.0   7.8e-27     7e-23       2      72 .]     302     372 ..     301     372 .. 0.98

  Alignments for each domain:
  == domain 1  score: 79.9 bits;  conditional E-value: 7.8e-27
                     EEETTEEEEEEE--TT--EES-HHHHHHHHHHT--SEE---BS-SSHHHHHHHHHHHHHHTTTT-.-GGGG CS
  Ribosomal_S5_C   2 gkfgavkvllkpaprGtGiiaggavravlelaGikDvlakslgsrnpinvvkAtfeALkklrspeevaalR 72 
                      kf+av+++l+++p+G+G++++   ++++++aGikD++  ++gs+n +nvvkA+feAL ++  pe++a +R
      EPX70654.1 302 KKFHAVHLTLRSRPAGFGLRCNAILFEICRCAGIKDLSGDVMGSKNGMNVVKAVFEALHEQTLPEDIALQR 372
                     69******************************************************************887 PP

>> Ribosomal_S5  Ribosomal protein S5, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.7   0.3   2.6e-21   2.4e-17       6      65 .]     230     289 ..     228     289 .. 0.98

  Alignments for each domain:
  == domain 1  score: 62.7 bits;  conditional E-value: 2.6e-21
                   EEEEEEEEEETTEEEEEEEEEEEEEETTTEEEEEEEEESSHHHHHHHHHHHHHHTEEE-- CS
  Ribosomal_S5   6 lkikrvqkvtkgGrrtsfsalvvvGdgnGlvGlGvgkakevatAirkAiekAkknlvpvp 65 
                   l+i+rv+++t++G++ s+++l+vvG++nG++G+G+gka++ + + +++  +A+k++ ++p
    EPX70654.1 230 LVIRRVVNQTRKGKIPSIYVLTVVGNRNGVIGYGEGKAANYSLSYKQSCARAVKSMKSIP 289
                   89******************************************************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (388 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       715  (0.0398795); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2705.13
//
Query:       EPX70655.1  [L=281]
Description: DNAJ domain-containing protein DNAJB family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.7e-13   48.0   0.6    3.3e-12   46.3   0.6    1.9  1  DnaJ      DnaJ domain
  ------ inclusion threshold ------
      0.093   12.6   0.0       0.24   11.3   0.0    1.6  1  COX14     Cytochrome oxidase c assembly


Domain annotation for each model (and alignments):
>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.3   0.6   3.7e-16   3.3e-12       2      63 .]      34     107 ..      33     107 .. 0.93

  Alignments for each domain:
  == domain 1  score: 46.3 bits;  conditional E-value: 3.7e-16
                 HHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTS............CCHHHHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ   2 yYeiLgvskdasedeIkkaYrklalkyHPDkn............pkdpeaeekFkeineAyevLsdpekRkqYD 63 
                 +Yei++++++++ ++Ik++Y +l++  HPDkn             ++++ +e F+ + +A + L+d ++R +YD
  EPX70655.1  34 PYEIMELPRTCTPADIKRKYIELVKLRHPDKNksgspedvalkaLDEKNRQEYFRLLVAAKSLLTDHQRRLEYD 107
                 7*******************************99998888887666778899*********************9 PP

>> COX14  Cytochrome oxidase c assembly
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   2.6e-05      0.24      20      54 ..     173     210 ..     173     212 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 2.6e-05
       COX14  20 tLiGvTlyaggllvytvysyg...kynrkqkaeliere 54 
                 ++i + ++ ++l++++vys++   k +r ++a++ie+ 
  EPX70655.1 173 GMIVFAAILSLLIIFSVYSNYrnsKFYREARAAAIEQS 210
                 67888888888888886655422289999999888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (281 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       589  (0.0328518); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.28s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 1980.30
//
Query:       EPX70656.1  [L=294]
Description: carrier with solute carrier repeats [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.9e-64  212.3   2.8    2.2e-22   78.8   0.1    3.0  3  Mito_carr  Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.8   0.1   1.2e-26   2.2e-22       5      96 ..       9      98 ..       6      99 .. 0.94
   2 !   63.4   0.0   7.8e-22   1.4e-17       4      94 ..     103     191 ..     100     194 .. 0.91
   3 !   69.4   0.2   1.1e-23   1.9e-19       3      91 ..     202     289 ..     200     293 .. 0.93

  Alignments for each domain:
  == domain 1  score: 78.8 bits;  conditional E-value: 1.2e-26
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCTT CS
   Mito_carr  5 vlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllkk 96
                 +k+++aG+++g++++lv +P+d vK+rlq+q+  s    +++++d++kki k+eGl ++y+G +  ll++    +++f++ye++kr++ ++
  EPX70656.1  9 SAKDFFAGATGGIAQVLVGQPFDCVKVRLQSQSFGSPL--YDNAIDCVKKISKNEGLGAFYKGTVTPLLGIGFCVSIQFATYEYTKRFFSRN 98
                5789****************************999766..5569********************************************9875 PP

  == domain 2  score: 63.4 bits;  conditional E-value: 7.8e-22
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlll 94 
                 sv +   aG+++g++++l++ P++ +++rlq+q + +k   +++ ld+++ki  + G++g  +G++p+ lr    s+++f++yetl++  +
  EPX70656.1 103 SVPQFYTAGAISGLANSLLVGPVEHIRIRLQIQTDANKL--YSGPLDCIRKISSQYGIKGIMKGFIPTALREGHGSGVYFLTYETLIKRSM 191
                 6667789*****************************986..455*****************************************988665 PP

  == domain 3  score: 69.4 bits;  conditional E-value: 1.1e-23
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   3 lsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkr 91 
                 ++ +k ++ G+++g   +++++P+d+vK ++qt++ ssk+  +++++++ + iy + G++g+yrG++p ++r ap +a++f +yet+ +
  EPX70656.1 202 IPGWKLCVFGAACGYSMWILAYPFDIVKSKIQTDGFSSKA-IYKNAWQCAQGIYSTSGMKGFYRGFIPVIVRAAPVNAATFYVYETVSQ 289
                 6778999******************************887.5667*****************************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (294 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       315  (0.0175693); expected 358.6 (0.02)
Passed bias filter:                      297  (0.0165653); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2092.76
//
Query:       EPX70657.1  [L=746]
Description: lanosterol synthase Erg7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.7e-47  160.8   0.1      1e-39  136.4   0.0    3.4  3  SQHop_cyclase_N  Squalene-hopene cyclase N-terminal domain
    2.1e-45  155.2   2.9    2.7e-43  148.3   0.1    3.2  3  SQHop_cyclase_C  Squalene-hopene cyclase C-terminal domain
    5.4e-32  109.2   4.5    7.9e-10   38.3   0.1    5.5  5  Prenyltrans      Prenyltransferase and squalene oxidase repea
    2.7e-05   23.6   0.0       0.52    9.6   0.0    3.6  4  Pec_lyase        Pectic acid lyase
    6.8e-05   22.0   0.6       0.15   11.1   0.1    3.6  4  TED_complement   A-macroglobulin TED domain
  ------ inclusion threshold ------
      0.087   12.7   0.8       0.66    9.9   0.1    2.4  2  Mago-bind        Mago binding


Domain annotation for each model (and alignments):
>> SQHop_cyclase_N  Squalene-hopene cyclase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.4   0.0   3.5e-43     1e-39       7     288 ..     105     394 ..     101     397 .. 0.84
   2 !   16.8   0.0   9.6e-07    0.0029       1      65 [.     580     647 ..     580     653 .. 0.78
   3 ?    3.5   0.0      0.01        31      21      66 ..     660     706 ..     655     735 .. 0.78

  Alignments for each domain:
  == domain 1  score: 136.4 bits;  conditional E-value: 3.5e-43
  SQHop_cyclase_N   7 allslqkpdGhWvgeLeanvtitaeyillreflgeddee.eeekiakylrsqqredGgWelypggpgdlsttveaYlALkllGdspdapalarA 99 
                      ++ +lq +dGhW    e  + +    ++   + ++  ++   e+i++yl ++ ++dGgW+++++g++ ++ t   Y  L++lG+++d+p  +rA
       EPX70657.1 105 FFRRLQLNDGHWASPYEGPMFLLPGIVFSFYITQTAFPRgWPEEITQYLVNHTNDDGGWGIHTEGASTVFGTSLNYAVLRILGMKKDHPIAVRA 198
                      5678999************999999999999996665543889*************************************************** PP

  SQHop_cyclase_N 100 refilarGGvakvrvfTrilLalfglvpweavpalPpelmlLPkwfpfniykfsswaRttivPllilsakkpvaklpr..evdldELfveppee 191
                      r+++++ GG+ +   + +++La++ +++w++++ +Ppel lLP+w+p++  ++ ++aR++++P+ +l+ ++ ++++++  +   +EL+v++ ++
       EPX70657.1 199 RACLHRLGGAIANPHWGKLWLATLNCYDWNGMNPIPPELWLLPDWVPVHPGRWWCHARQVYLPMGYLYGEQLSCPINAfiRELREELYVDDYDS 292
                      ****************************************************************************9887778899*****999 PP

  SQHop_cyclase_N 192 vkyelrkekk.....alswtklflaldkvlklle.rlplkplrkrAlrkaeewilerqeasg.glggifpamvnsvlaLrllgydldhpvvara 278
                      ++++ +++        +  t++++ l+ ++  +   + ++ +rk + +ka + i  + e+++    g + a++n++ ++  +g   + +++++ 
       EPX70657.1 293 IDFSKHRNTVyetdlCHPHTTVLNSLNWLMDKYFtFVRPQWIRKLGTKKAYQLIQLENENTDyACLGPVNAALNTLCVYYQEGP--SSKAFQKI 384
                      9999532222222222223444555555555544256899************99877665441455666778888888877774..55678888 PP

  SQHop_cyclase_N 279 lealekllve 288
                      ++ l+++++ 
       EPX70657.1 385 IRRLHEFMWV 394
                      8888888875 PP

  == domain 2  score: 16.8 bits;  conditional E-value: 9.6e-07
  SQHop_cyclase_N   1 ikraaeallslqkpdGhWvgeLeanvtitaeyil..lrefl.geddeeeeekiakylrsqqredGgWe 65 
                      i++a ++++++q+pdG W+g    + t  a      l ++    ++ + ++k++++l+s+qr+dGgW+
       EPX70657.1 580 IRNALSFVIKSQRPDGSWYGSWAICFTYAAMFATdsLATVGrCYENCDVQRKACEFLLSKQRPDGGWS 647
                      67788999************9999988888765421333332233456999****************7 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.01
  SQHop_cyclase_N  21 eLeanvtitaeyillrefl.geddeeeeekiakylrsqqredGgWel 66 
                      e e+++++++ + ll  +  +  +++ +ek  ++++++q ++G+W+ 
       EPX70657.1 660 ETESSLVTQTSWALLALMHaKYPHRKPIEKGIQFIMKTQASNGSWKQ 706
                      556777777777777777656667889999999************86 PP

>> SQHop_cyclase_C  Squalene-hopene cyclase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.9   0.4    0.0039        12     163     230 ..     101     167 ..      92     179 .. 0.66
   2 ?   -2.2   0.0      0.59   1.8e+03      14      49 ..     302     338 ..     296     370 .. 0.80
   3 !  148.3   0.1     9e-47   2.7e-43       4     317 ..     409     736 ..     407     738 .. 0.86

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.0039
                      HHHHHHHHHS-TTS----SS.BSSHHHHHHHHHHHHHHTT--TTSHHHHHHHHHHHTT--TTSSBB--G CS
  SQHop_cyclase_C 163 raveylkkeqepdGsWfGrW.GvnyiyGtwsvlsalaavgedleepvirkavdWlksvqnedGGWGesa 230
                      ++ e++++ q +dG W   + G  ++     ++ ++   ++   + + ++  ++l+++ n+dGGWG ++
       EPX70657.1 101 HGYEFFRRLQLNDGHWASPYeGPMFLL--PGIVFSFYITQTAFPRGWPEEITQYLVNHTNDDGGWGIHT 167
                      566677777777777666552333332..234444555555566666677789999999******9765 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.59
                      HHHHT--TT-HHHHHHHHHHHTT-B-.S--GGGGT-T CS
  SQHop_cyclase_C  14 lleagveaeeealkkaleWllekqvl.vkGdWkvkrp 49 
                      + e++  + ++++ ++l+Wl++k  + v+  W  k  
       EPX70657.1 302 VYETDLCHPHTTVLNSLNWLMDKYFTfVRPQWIRKLG 338
                      56777788899999999****9997756888877754 PP

  == domain 3  score: 148.3 bits;  conditional E-value: 9e-47
                      HHHHHHHHHHHHHHT--...TT-HHHHHHHHHHHTT-B-S--GGGGT-TTS---BB-SSSS-TT--BHHHHHHHHHHHTT---.ST..HHHHHH CS
  SQHop_cyclase_C   4 vWdtalavlalleagve...aeeealkkaleWllekqvlvkGdWkvkrpevepgGwafefaneyyPdvddtavvvlalkrvrl.ke..ekkkee 91 
                      vW++++++ al+++g       ++ + +ale+l ++q++++   k  r++ + g w f    + y   d t+  + a+ +v+   e  +  + +
       EPX70657.1 409 VWEASFTLNALVDSGLCeskMYQKDMIRALEFLDRQQIRNEYAGKGYRHN-SKGAWPFSNITQGYTVSDTTSEALRAVLKVQSlPEfgKPVSLS 501
                      9************9865111567899************987666655555.5799**********99999998888877776413321445567 PP

                      HHHHHHHHHHHTB-TTSSB-SSSSSB--SGGGGSTT-SS..S-SSB--BHHHHHHHHHHHHHH...T-....-TTSHHHHHHHHHHHHHS-TTS CS
  SQHop_cyclase_C  92 aiaraveWilglqsknGGwaafdkdntkellnkiPfadh..ealldpptadvtarvlellaql...ge....eedsealkraveylkkeqepdG 176
                      +++ av+ +l +q+k+ G+a+++   ++e l+++  a+   + +++++  + t+ v+ +l  +   +e    ee ++++++a++++ k q+pdG
       EPX70657.1 502 RLREAVDVLLLMQNKDFGFASYEPARASEWLEQLNPAEVfgKIMVEYSYPECTTSVVLALRAFtlyDEsyrrEEIEKTIRNALSFVIKSQRPDG 595
                      88899*****************************88885446799999999999988777654111321111455788999************* PP

                      ----SSBSSHHHHHHHHHHHHHHTT--.TTSHHHHHHHHHHHTT--TTSSBB--GGGGT-GGGTT-SSBBHHHHHHHHHHHHHTTGGGSHHHHH CS
  SQHop_cyclase_C 177 sWfGrWGvnyiyGtwsvlsalaavged.leepvirkavdWlksvqnedGGWGesaesykdpklagkgestasqtaWallallaageveseavkr 269
                      sW+G W + + y ++ +  +la+vg   ++ +v rka ++l s+q++dGGW es  +   ++++++ +s  +qt+Wallal+ a   +++ +++
       EPX70657.1 596 SWYGSWAICFTYAAMFATDSLATVGRCyENCDVQRKACEFLLSKQRPDGGWSESYMACLTENYTETESSLVTQTSWALLALMHAKYPHRKPIEK 689
                      *************************87366788899********************************************************** PP

                      HHHHHHHH--TTS-----S--EEEETTTEEEEETTHHHHHHHHHHHHH CS
  SQHop_cyclase_C 270 GiaylletqkedGtWeeeaytgtGfPrvfylkyhlyrkvfPllalary 317
                      Gi+++++tq ++G+W+++++ g  f +   + y +y+ +f + al+ +
       EPX70657.1 690 GIQFIMKTQASNGSWKQNSIEGI-FNKSVAIAYPNYKFYFSIHALGLF 736
                      ******************99985.********************9865 PP

>> Prenyltrans  Prenyltransferase and squalene oxidase repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.47   1.4e+03      11      26 ..     107     122 ..     103     135 .. 0.77
   2 !   32.1   0.0   2.3e-11   6.7e-08       4      44 .]     147     187 ..     145     187 .. 0.97
   3 !   27.7   0.0   5.4e-10   1.6e-06       3      44 .]     580     620 ..     578     620 .. 0.92
   4 !   38.3   0.1   2.6e-13   7.9e-10       3      41 ..     629     677 ..     627     679 .. 0.95
   5 !    7.7   0.0     0.001         3       3      21 ..     687     705 ..     687     707 .. 0.93

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.47
                  HHHSHTTS-BBSSTTS CS
  Prenyltrans  11 lscQnedGGwggrpgs 26 
                  ++ Q  dG+w++ +++
   EPX70657.1 107 RRLQLNDGHWASPYEG 122
                  678999****987776 PP

  == domain 2  score: 32.1 bits;  conditional E-value: 2.3e-11
                  HHHHHHHHHHSHTTS-BBSSTTSSBBHHHHHHHHHHHHHCT CS
  Prenyltrans   4 ekavefLlscQnedGGwggrpgsesdtyytywalaaLallG 44 
                  e+++++L ++ n+dGGwg + ++ s++++t  ++a+L +lG
   EPX70657.1 147 EEITQYLVNHTNDDGGWGIHTEGASTVFGTSLNYAVLRILG 187
                  89*************************************98 PP

  == domain 3  score: 27.7 bits;  conditional E-value: 5.4e-10
                  HHHHHHHHHHHSHTTS-BBSSTTSSBBHHHHHHHHHHHHHCT CS
  Prenyltrans   3 vekavefLlscQnedGGwggrpgsesdtyytywalaaLallG 44 
                  ++ a+ f+++ Q++dG+w+g++  + +ty++++a+ +La +G
   EPX70657.1 580 IRNALSFVIKSQRPDGSWYGSWAIC-FTYAAMFATDSLATVG 620
                  67899****************9999.*********9999876 PP

  == domain 4  score: 38.3 bits;  conditional E-value: 2.6e-13
                  HHHHHHHHHHHSHTTS-BBSSTTS..........SBBHHHHHHHHHHHH CS
  Prenyltrans   3 vekavefLlscQnedGGwggrpgs..........esdtyytywalaaLa 41 
                   +ka+efLls+Q++dGGw++++             s + +t wal+aL+
   EPX70657.1 629 QRKACEFLLSKQRPDGGWSESYMAcltenyteteSSLVTQTSWALLALM 677
                  68********************************9999*********97 PP

  == domain 5  score: 7.7 bits;  conditional E-value: 0.001
                  HHHHHHHHHHHSHTTS-BB CS
  Prenyltrans   3 vekavefLlscQnedGGwg 21 
                  +ek ++f++++Q   G+w 
   EPX70657.1 687 IEKGIQFIMKTQASNGSWK 705
                  69****************5 PP

>> Pec_lyase  Pectic acid lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.0       2.4   7.1e+03      64      89 ..     503     528 ..     501     531 .. 0.84
   2 ?    2.6   0.0     0.024        71      56      85 ..     572     601 ..     552     619 .. 0.76
   3 !    6.8   0.0    0.0013       3.8      62      86 ..     627     651 ..     616     678 .. 0.87
   4 !    9.6   0.0   0.00017      0.52      60      83 ..     683     706 ..     666     710 .. 0.86

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 2.4
   Pec_lyase  64 vrkglefllkaqYsnGgwpqfyPlkk 89 
                 +r++++ ll +q +  g+  + P++ 
  EPX70657.1 503 LREAVDVLLLMQNKDFGFASYEPARA 528
                 57899999999999999999988875 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.024
   Pec_lyase  56 kdekykdavrkglefllkaqYsnGgwpqfy 85 
                 + e+ ++++r++l f++k+q + G+w   +
  EPX70657.1 572 RREEIEKTIRNALSFVIKSQRPDGSWYGSW 601
                 456778899*****************7666 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.0013
   Pec_lyase  62 davrkglefllkaqYsnGgwpqfyP 86 
                 d  rk+ efll+ q + Ggw   y 
  EPX70657.1 627 DVQRKACEFLLSKQRPDGGWSESYM 651
                 5579****************99884 PP

  == domain 4  score: 9.6 bits;  conditional E-value: 0.00017
   Pec_lyase  60 ykdavrkglefllkaqYsnGgwpq 83 
                 +++ + kg++f++k+q snG+w+q
  EPX70657.1 683 HRKPIEKGIQFIMKTQASNGSWKQ 706
                 477899****************99 PP

>> TED_complement  A-macroglobulin TED domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       1.3     4e+03     158     194 ..     413     447 ..     401     452 .. 0.59
   2 !    4.6   0.0    0.0047        14     101     135 ..     561     597 ..     487     603 .. 0.78
   3 !   11.1   0.1   4.9e-05      0.15     116     170 ..     627     682 ..     609     701 .. 0.75
   4 ?    3.3   0.1     0.012        35     115     139 ..     684     708 ..     679     720 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 1.3
                     HHHHHHHHHHHTTCSHHHHHHHHHHHHHHHHHHHHHH CS
  TED_complement 158 AyvliaLleakeilelkkkvelsiskAleyLeekqae 194
                     ++ l aL+ +  + +++k  +  + +Ale+L+++q +
      EPX70657.1 413 SFTLNALVDS-GL-CESKMYQKDMIRALEFLDRQQIR 447
                     4455555554.22.34555666667788888774443 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.0047
                     HHHHHHCHHHST..--HHHHHHHHHHHHTTB-TTS-B CS
  TED_complement 101 lkvlaqakefif..ideeeiseslewLlseQkedGsF 135
                     l+ +  ++e +     e+ i+++l++++++Q++dGs+
      EPX70657.1 561 LRAFTLYDESYRreEIEKTIRNALSFVIKSQRPDGSW 597
                     4555555554443333689****************97 PP

  == domain 3  score: 11.1 bits;  conditional E-value: 4.9e-05
                     HHHHHHHHHHHTTB-TTS-B--SS-SS-T.TCSSSTHCHHHHHHHHHHHHHHHHTT CS
  TED_complement 116 eeiseslewLlseQkedGsFkeegsllnr.kmkggvekevtLtAyvliaLleakei 170
                     + +++++e+Lls+Q++dG + e+     + + + + +  vt t+++l+aL++ak  
      EPX70657.1 627 DVQRKACEFLLSKQRPDGGWSESYMACLTeNYTETESSLVTQTSWALLALMHAKYP 682
                     567899**************9998765541666665777************99543 PP

  == domain 4  score: 3.3 bits;  conditional E-value: 0.012
                     HHHHHHHHHHHHTTB-TTS-B--SS CS
  TED_complement 115 eeeiseslewLlseQkedGsFkeeg 139
                     ++ i++ +++++++Q  +Gs+k+++
      EPX70657.1 684 RKPIEKGIQFIMKTQASNGSWKQNS 708
                     6889*****************9875 PP

>> Mago-bind  Mago binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.1   0.00022      0.66       5      15 ..     587     597 ..     585     597 .. 0.85
   2 ?    0.5   0.1      0.19   5.8e+02       9      15 ..     640     646 ..     638     646 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00022
   Mago-bind   5 IpaSqRpDGtv 15 
                 +  SqRpDG++
  EPX70657.1 587 VIKSQRPDGSW 597
                 567*******9 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.19
   Mago-bind   9 qRpDGtv 15 
                 qRpDG +
  EPX70657.1 640 QRPDGGW 646
                 9****77 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (746 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       400  (0.0223102); expected 358.6 (0.02)
Passed bias filter:                      366  (0.0204139); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.62u 0.27s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 5095.14
//
Query:       EPX70658.1  [L=639]
Description: heat shock protein S [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   1.2e-260  865.8   6.2   1.4e-260  865.6   6.2    1.0  1  HSP70           Hsp70 protein
    2.2e-17   62.9   0.1    5.1e-16   58.4   0.1    2.1  2  MreB_Mbl        MreB/Mbl protein
    0.00025   20.9   0.0    0.00075   19.3   0.0    1.9  2  FGGY_C          FGGY family of carbohydrate kinases, C-termin
  ------ inclusion threshold ------
      0.024   14.1   0.6      0.044   13.2   0.0    1.6  2  Ppx-GppA        Ppx/GppA phosphatase family
      0.052   12.8   0.2       0.14   11.4   0.2    1.7  1  Hydantoinase_A  Hydantoinase/oxoprolinase


Domain annotation for each model (and alignments):
>> HSP70  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  865.6   6.2  3.9e-264  1.4e-260       2     599 .]       5     610 ..       4     610 .. 0.98

  Alignments for each domain:
  == domain 1  score: 865.6 bits;  conditional E-value: 3.9e-264
                 EEEEEXSSEEEEEEEETTEEEEEXXTTSXSSEESEEEEXTTSEEETHHHHHCTTTTGGGEEEXGGGTTTXBTTSHHHHHHHTTXSSEEEEETTSBEEEE CS
       HSP70   2 iGiDLGttnsvvavmeggkievianeegnrttPsvvaFtkkerlvGeaAkrqavtnpkntvfsvKrliGrkfsdpevqkeikelpykvvkkengkavve 100
                 iGiDLGtt+s+v+ + ++++e+ian++gnrttPs+vaFt++erl+G+aAk+q+++np+nt+f++KrliGr+f+d+evq+++k++p+kvv k  gk+ ++
  EPX70658.1   5 IGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRRFTDAEVQSDMKHWPFKVVDK-GGKPLLQ 102
                 9****************************************************************************************99.9****** PP

                 EEETTE..EEEHHHHHHHHHHHHHHHHHHHHTSBEEEEEEEEXTTXXHHHHHHHHHHHHHTTXEEEEEEEHHHHHHHHHHTCCSS.SCEEEEEEEEXSS CS
       HSP70 101 veaage..kftpeqisamvLkklketaeaylgkkvtdavitvPaYfndaqRqatkdAgkiAGLnvlRivNepTAaalaYGldkkd.kernvlvyDlGgg 196
                 ve++ge  +ftpe+is+mvL k++e aeay+g k+tdav+tvPaYfnd+qRqatkdAg+iAG+nvlRi+NepTAaa+aYGld++  ke nvl++DlGgg
  EPX70658.1 103 VEFKGEtkTFTPEEISSMVLLKMREVAEAYMGSKITDAVVTVPAYFNDSQRQATKDAGTIAGMNVLRIINEPTAAAIAYGLDRNTqKETNVLIFDLGGG 201
                 *****999**************************************************************************87769************ PP

                 XEEEEEEEEETTEEEEEEEEEETTXSHHHHHHHHHHHHHHHHHHHHSXXGGGSHHHHHHHHHHHHHHHHHTTTSSCSEEEEEEEEEETTTEEEEEEEEH CS
       HSP70 197 tfdvSilelekGvfevkaTagDthlGGedfDealvehlveefkkkegidlskdkkalqrlkeaaekaKkeLSsskqteinleietvdedgkdlseklsR 295
                 tfdvS+l++e+G+fevk+TagDthlGGedfD++lv+h+++efk+k++ d+s + +a++rl++a+e+aK++LSs  ++++++ei+++ e g d+ ++++R
  EPX70658.1 202 TFDVSLLTIEEGIFEVKSTAGDTHLGGEDFDSRLVNHFIQEFKRKNKKDISGNARAVRRLRTACERAKRTLSS--SSQASIEIDSMYE-GIDFYTSITR 297
                 *************************************************************************..899999*******.********** PP

                 HHHHHHHHHHHHHTHHHHHHHHHHCTEEGGGCSEEEEESGGGGSHHHHHHHHHHTT.CHHBSSSHTTTHHHHHHHHHHHHHCTC..GCSHCCEEEEBES CS
       HSP70 296 akfeelvedllertlepvekalkdaklkkeeidevvlvGGstRiPkvqelvkelfg.kepsktvnpDeavaiGAAvqagvlsge..eevkdllllDvtp 391
                 a+feel++dl+++t+epvek+l+dak++k+ +de+vlvGGstRiP++q+lv+++f  kep+k++npDeava+GAAvqa++l+g+  e+ +dllllDv p
  EPX70658.1 298 ARFEELCSDLFRNTMEPVEKVLRDAKVDKSSVDEIVLVGGSTRIPRIQKLVSDFFHgKEPCKSINPDEAVAYGAAVQAAILTGDtsEKAQDLLLLDVAP 396
                 *******************************************************88**************************977899********** PP

                 S-EEEEETTTEEEEEESTTCBSSEEEEEEEEESSTTSSSEEEEEEESSSSBGGGSEEEEEEEEECESSCSTTCSEEEEEEEEETTSCEEEEEEETTTCC CS
       HSP70 392 LslgietlggvmtkliernttiptkksqvfstaadnqtaveievlqgerelvkdnkllgsfeldgippaprGvpqieVtfdidanGiltvsakdketgk 490
                 Ls+giet+ggvmt li+rnttiptkks+vfst++dnq+ v i+v++ger+ +kd++llg+fel+gippaprGvpqieVtfd+danGil+vsa +k+tgk
  EPX70658.1 397 LSMGIETAGGVMTPLIKRNTTIPTKKSEVFSTYSDNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGK 495
                 *************************************************************************************************** PP

                 EEEEEEECCSS.SBHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH..GGGSTHHHH....HHHHHHHHHHHCHTTSSCHHHHHHH CS
       HSP70 491 eeeitieaseg.lseeeiekmvkdaeesaeedkkkkeaieakneaeelvyslekkleee..aekvseaek....ekvesaieeLkeeleeeekeeieak 582
                 +++iti++++g ls+eei++mv dae++++ed++++++i+akn++e+++ysl++++++   ++kv++++k    ++v+++ie+L++++ ++ k+e+eak
  EPX70658.1 496 TQKITITNDKGrLSKEEIDRMVADAEKYKAEDEAEAARIQAKNHLESYAYSLRNSMDDPnlKDKVDASDKesidKAVKETIEWLDNNT-TAAKDEYEAK 593
                 ***********9*********************************************99999****99998999999999****9996.7889****** PP

                 HHHHHHHHHHHHHHHHH CS
       HSP70 583 teelkkvvekiaeklye 599
                 ++el+ v+++i++k+y+
  EPX70658.1 594 QKELEGVANPIMAKVYQ 610
                 *************9986 PP

>> MreB_Mbl  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0     0.016        57       2      48 ..       3      55 ..       2      85 .. 0.64
   2 !   58.4   0.1   1.4e-19   5.1e-16      91     316 ..     135     372 ..     114     380 .. 0.79

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.016
                SEEEEEE-SSEEEE..EETTTE.EEEEE......ES-EEEETTT--EEEESHHHHT CS
    MreB_Mbl  2 kdlgiDLGtantlv..yvkgkg.ivlne......psvvAikkktkkvlavGeeAkk 48
                k++giDLGt+   v  + +++  i+ n+      ps vA++ +++    +G+ Ak+
  EPX70658.1  3 KSIGIDLGTTYSCVghFSNNRVeIIANDqgnrttPSYVAFTDTER---LIGDAAKN 55
                789*******99997555554413333222222266666654433...24555555 PP

  == domain 2  score: 58.4 bits;  conditional E-value: 1.4e-19
                 SS--EEEEEE-SS--HHHHHHHHHHHHHTT-SEEEEEEHHHHHHHHTT--..TTSSS-EEEEEE-SS-EEEEEEETT.EEEEEEE....ES-SHHHHHH CS
    MreB_Mbl  91 lskprvvicvPsgiteverrAvkeaakkaGarevllieeplaAAiGaglp..veepsgnmvvdiGggttevavislg.givtsks....vrvaGdelde 182
                  + +  v++vP   ++ +r+A k+a + aG +   +i+ep aAAi  gl+   ++ +  ++ d+Gggt +v+++++  gi + ks     +++G+++d+
  EPX70658.1 135 SKITDAVVTVPAYFNDSQRQATKDAGTIAGMNVLRIINEPTAAAIAYGLDrnTQKETNVLIFDLGGGTFDVSLLTIEeGIFEVKStagdTHLGGEDFDS 233
                 3556789**************************************777752267788889***************85378877773333589******9 PP

                 HHHHHH.....HHHHSEE--.HHHHHHHHHHH-BSS--HHHH.EEEEEEEETTTTCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHHHHH CS
    MreB_Mbl 183 aiikyi.....rkkynlliG.ertaekikieigsavkeeeee.kmeikGrdlvtglpkevevsseevrealkepvsaiveavkevLektppeLaadivd 274
                  ++++      rk+ + + G  r +++++++   a+ + +++ + +i+   + +g+   ++++ ++ +e  ++ +++ +e v++vL++++ + ++  v 
  EPX70658.1 234 RLVNHFiqefkRKNKKDISGnARAVRRLRTACERAKRTLSSSsQASIEIDSMYEGIDFYTSITRARFEELCSDLFRNTMEPVEKVLRDAKVDKSS--V- 329
                 98877522222333333344145668889998888887766669999999**************************************9999775..3. PP

                 H-EEEESGGGGSBTHHHHHHHHHSS-EEE.-SSTTTHHHHHHH CS
    MreB_Mbl 275 rgivltGGgallkgldkllseetglpvkv.aedpltcvakGtg 316
                   ivl+GG++ +  ++kl+s+ ++ +  + + +p ++va G++
  EPX70658.1 330 DEIVLVGGSTRIPRIQKLVSDFFHGKEPCkSINPDEAVAYGAA 372
                 56999***************99876654415688888888876 PP

>> FGGY_C  FGGY family of carbohydrate kinases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   2.1e-07   0.00075     123     196 ..     295     377 ..     236     379 .. 0.75
   2 ?   -3.0   0.0       1.4     5e+03      48      70 ..     573     595 ..     570     613 .. 0.56

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 2.1e-07
      FGGY_C 123 iarAaleavalqlrailealekd..................sgkpldrlavdGGgskndllmqllAdilg..vpVerpktaeatalGaAilAav 196
                 i           +ra+ e+l +d                  +++ +d+++++GG ++ + +++l  d +    p +   ++ea+a GaA+ Aa+
  EPX70658.1 295 I-----------TRARFEELCSDlfrntmepvekvlrdakvDKSSVDEIVLVGGSTRIPRIQKLVSDFFHgkEPCKSINPDEAVAYGAAVQAAI 377
                 2...........344444443335555555555567777778999************************9999*******************96 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.4
      FGGY_C  48 gslvawlldnlglreeirdagev 70 
                 +++++wl +n  ++++  +a+++
  EPX70658.1 573 KETIEWLDNNTTAAKDEYEAKQK 595
                 67889999997444433333333 PP

>> Ppx-GppA  Ppx/GppA phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.2e-05     0.044      91     230 ..     170     312 ..     155     334 .. 0.75
   2 ?   -3.3   0.1       1.3   4.6e+03      27     234 ..     503     529 ..     490     544 .. 0.61

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.2e-05
                 E-HHHHHHHHHHHHHHHT---SSEEEEEEETTEEEEEEEETTEEEEEEEES--CCHHHHHHSGCCC--HHHHHHHHHHHHHH..CTTTHHHHCCCE.HH CS
    Ppx-GppA  91 isgeeEarliylgvvssllekgrglviDiGGGStElvlgeekevsklvSlplGavrlterfltddpltkeeveaarkaveke..leevkdevkkeg.ew 186
                 i  e  a  i++g+ ++++++ ++l+ D+GGG  +++l + +e  + v    G   l  + ++++ ++  + e+ rk  + +   +++++ ++++   +
  EPX70658.1 170 IINEPTAAAIAYGLDRNTQKETNVLIFDLGGGTFDVSLLTIEEGIFEVKSTAGDTHLGGEDFDSRLVNHFIQEFKRKNKKDIsgNARAVRRLRTACeRA 268
                 344445667789999999999999*************99887777766667899999999999996665555555553333334556666666766889 PP

                 CCCCCCCHCCHHCHHHHHHCT.SSCEEEHHHHHHHHHHHCTSSC CS
    Ppx-GppA 187 trlvgtsgtisalaeltelhgekgyeitaeeleeliekllqlkk 230
                 +r++++s   s+  +++ +  +   +it++++eel+  l++ + 
  EPX70658.1 269 KRTLSSSSQASIEIDSMYEGIDFYTSITRARFEELCSDLFRNTM 312
                 9999999988888877776666699**************99875 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.3
                 HCCSSC-HHHHHHHHHHHHHHHHHCCCTTGCCEEEEEEHHHHHSTTHHHHHHHHCCCCSS-EEEE-HHHHHHHHHHHHHHHT---SSEEEEEEETTEEE CS
    Ppx-GppA  27 nesgrlqeeaiertisaLkefaellqkfkvenvrvVATsalRdavNadeFlarvkkevglkveiisgeeEarliylgvvssllekgrglviDiGGGStE 125
                 n                                                                                                  
  EPX70658.1 503 ND------------------------------------------------------------------------------------------------- 504
                 33................................................................................................. PP

                 EEEEETTEEEEEEEES--CCHHHHHHSGCCC--HHHHHHHHHHHHHHCTTTHHHHCCCEHHCCCCCCCHCCHHCHHHHHHCT.SSCEEEHHHHHHHHHH CS
    Ppx-GppA 126 lvlgeekevsklvSlplGavrlterfltddpltkeeveaarkavekeleevkdevkkegewtrlvgtsgtisalaeltelhgekgyeitaeeleeliek 224
                                                                                                     ++++++ee+  +++ 
  EPX70658.1 505 ------------------------------------------------------------------------------------KGRLSKEEIDRMVAD 519
                 ....................................................................................455555555555555 PP

                 HCTSSCHHHH CS
    Ppx-GppA 225 llqlkkeeel 234
                 + + k+e+e+
  EPX70658.1 520 AEKYKAEDEA 529
                 5555555555 PP

>> Hydantoinase_A  Hydantoinase/oxoprolinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.2   3.8e-05      0.14      55      99 ..     167     211 ..     124     230 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 3.8e-05
  Hydantoinase_A  55 vetilSGPaaGvvgaaatsklagekkvItfDmGGTstDvslikdg 99 
                     v  i+  P a ++++    ++++e++v+ fD+GG ++Dvsl+   
      EPX70658.1 167 VLRIINEPTAAAIAYGLDRNTQKETNVLIFDLGGGTFDVSLLTIE 211
                     5556667888888877778999999**************987643 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (639 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1134  (0.0632495); expected 358.6 (0.02)
Passed bias filter:                      711  (0.0396564); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.71u 0.32s 00:00:01.03 Elapsed: 00:00:00.48
# Mc/sec: 4026.73
//
Query:       EPX70659.1  [L=277]
Description: hypothetical protein SOCG_04297 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.9e-32  111.1   1.0    5.9e-32  111.1   1.0    3.2  2  Smg4_UPF3   Smg-4/UPF3 family
  ------ inclusion threshold ------
      0.034   14.3   0.0      0.081   13.1   0.0    1.7  1  RRM_7       RNA recognition motif


Domain annotation for each model (and alignments):
>> Smg4_UPF3  Smg-4/UPF3 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.1   1.0   6.6e-36   5.9e-32       4     172 ..      13     161 ..      11     163 .. 0.87
   2 ?   -7.7   8.7         2   1.8e+04     126     126 ..     209     209 ..     164     273 .. 0.59

  Alignments for each domain:
  == domain 1  score: 111.1 bits;  conditional E-value: 6.6e-36
   Smg4_UPF3   4 tKvviRrLPPnLteeefleavsdkplpetvdykyFvpGklskdslkeskysrayinfkdpedlvqfakkfdghvFvDskgnespaivefApyqkvpkkk 102
                  K+ +  LP +L+ee fl+++   ++++ +++ ++++Gk ++++ +++++s ay++fk+++ + +f + ++ghvFvD+ +n ++a + +Ap+qkvp  k
  EPX70659.1  13 CKILVHNLPETLPEEIFLKSIA--SFHPFINWHRYHQGK-RQNPPQPNIPSFAYLKFKSESHVHDFFRFYQGHVFVDKDENVYRALLLVAPFQKVPPVK 108
                 69********************..7888***********.99*****************************************************9977 PP

   Smg4_UPF3 103 kkkkdakqgtIekDpeylaFleslekeeeekeseseeeklaeeaeekekekeakkekktttpLleylkek 172
                  +k+d+ +gtIe+Dp ++aF+ + ++    +   s                 ++  ++t+tpLl yl+ek
  EPX70659.1 109 -SKPDSLNGTIEDDPVFKAFVDKWNESLIPPPPPS----------------PSHYIQNTSTPLLHYLAEK 161
                 .9********************9995433322222................2233556666666666666 PP

  == domain 2  score: -7.7 bits;  conditional E-value: 2
   Smg4_UPF3 126 l 126
                 l
  EPX70659.1 209 L 209
                 1 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0     9e-06     0.081       2      66 ..      13      75 ..      12      94 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 9e-06
       RRM_7  2 rkvFvGGlPiDiteeelkatfkefgkvlvdwPkkaeskkkaaenskaakgyvflvfedeksvkaL 66
                +k+ v  lP  + ee   +++ +f +  ++w + ++ k++++  +    ++++l f++e+ v++ 
  EPX70659.1 13 CKILVHNLPETLPEEIFLKSIASFHPF-INWHRYHQGKRQNPP-QPNIPSFAYLKFKSESHVHDF 75
                8***********************985.9**999888777764.555789***********9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (277 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1201  (0.0669864); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.32s 00:00:00.85 Elapsed: 00:00:00.47
# Mc/sec: 1759.38
//
Query:       EPX70660.1  [L=595]
Description: membrane anchored protein Mac1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.2e-14   51.7  15.9    1.4e-13   51.0  15.9    1.3  1  SUR7             SUR7/PalI family
  ------ inclusion threshold ------
      0.016   15.0   2.7      0.028   14.1   2.7    1.3  1  PhoLip_ATPase_C  Phospholipid-translocating P-type ATPase C-t
        2.9    8.0   6.7       0.19   11.8   0.9    1.8  2  P_C              P protein C-terminus


Domain annotation for each model (and alignments):
>> SUR7  SUR7/PalI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.0  15.9   2.3e-17   1.4e-13       4     191 ..       6     161 ..       3     177 .. 0.82

  Alignments for each domain:
  == domain 1  score: 51.0 bits;  conditional E-value: 2.3e-17
        SUR7   4 illflslaalilllfailgsiknstplt.....siylskfdlsgldlaqigladvysfgvwgyCdnsdvnytkCskpkagypfdpleelnsesngkvdl 97 
                 ++++++l+ li +++ i+gs+  s p t     ++ l+k++                 g++g C   ++n ++Csk+++gy +d  ++l +e       
  EPX70660.1   6 LAFLTILFLLISTALLIIGSV--SIPATfkltsKMMLAKLNGN-------------LLGIFGTC---SDNGQNCSKTSFGYSID--DSLVQEFY----Y 80 
                 455666666777777888888..88887555567777777777.............9*******...*****************..*******9....9 PP

        SUR7  98 Psnlrktlsklnnltkalfilhiialvlsfislvvgllaicvspdnsrllsflnlllsvlsflatllaalldtllfvfvrkkin.lkefgikasl 191
                  ++ r+ lsk       ++i+hii++ +sf+s ++ +l+++    + + l ++n+l+  l++l+t+ a ++ ++lf       n ++++ +   +
  EPX70660.1  81 KGDKRYILSK-------VLITHIIGCGMSFLSACLVFLSFF--VVKQS-LNIFNILFVSLTTLVTCCALGVELALFL----PHNtWQSYVVAGAV 161
                 9*********.......9**********************9..66667.99*************************9....22224444444444 PP

>> PhoLip_ATPase_C  Phospholipid-translocating P-type ATPase C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   2.7   4.8e-06     0.028      99     204 ..      77     180 ..      69     203 .. 0.70

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 4.8e-06
  PhoLip_ATPase_C  99 elYklgqknklfnlktfllwilegl.yqsliifflsylvlddssfsdgktndlqlfg.tlvftalvlvvnlkvaletktwtliliililgsill 190
                      e+Y++g k+ +++   +   i  g+ + s++++fls++v+++s     + +++ +++ t+ +t++ l v l ++l ++tw+ ++++  +gs ll
       EPX70660.1  77 EFYYKGDKRYILSKVLITHIIGCGMsFLSACLVFLSFFVVKQSL----NIFNILFVSlTTLVTCCALGVELALFLPHNTWQSYVVAGAVGSDLL 166
                      78999998887776444433333322566667777788877764....567777766256688999999**********************878 PP

  PhoLip_ATPase_C 191 yflflllyssllps 204
                       +l l++ ss+++ 
       EPX70660.1 167 ALLNLCFRSSSISR 180
                      88888777776554 PP

>> P_C  P protein C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.6      0.53   3.2e+03      33      90 ..     199     258 ..     178     271 .. 0.57
   2 ?   11.8   0.9   3.3e-05      0.19      51     102 ..     347     400 ..     320     405 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.53
         P_C  33 skakskeedd.pek.evaaaalaassprhsdgarsavvvvdpdenqpnssssaG.gGstpe 90 
                 s +  ke+d+ p   + + ++++a+ p+  d   sa+    p  ++ +ss   G + s  e
  EPX70660.1 199 SLSAYKEKDNyPLTmDDKLTNVSATLPKFNDALTSASD-LGPPSERGDSSFKKGtSASVQE 258
                 33333444432322255566678888999998888886.6666666677665551444445 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 3.3e-05
         P_C  51 alaassprhsdgarsavvvvdpde..nqpnssssaGgGstpeGpcsedatGpla 102
                 + ++ssp  sd++ s+  +v+pd   ++p  + +  +    e p se+at p+a
  EPX70660.1 347 SKSDSSPTSSDDTYSSFFDVNPDLrlAEPRGTQGQPSSPVNEHPLSEKATRPFA 400
                 5679*******************966788888877888888*********9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (595 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       741  (0.0413297); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.41
# Mc/sec: 4310.97
//
Query:       EPX70661.1  [L=537]
Description: acyl-coA-sterol acyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-52  178.9  24.3    1.8e-52  178.9  24.3    1.9  2  MBOAT     MBOAT, membrane-bound O-acyltransferase family
    1.9e-06   28.1   4.3    1.9e-06   28.1   4.3    1.9  2  MBOAT_2   Membrane bound O-acyl transferase family


Domain annotation for each model (and alignments):
>> MBOAT  MBOAT, membrane-bound O-acyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   4.5      0.79   7.1e+03     126     209 ..      88     166 ..      73     179 .. 0.62
   2 !  178.9  24.3     2e-56   1.8e-52       2     348 .]     191     536 ..     190     536 .. 0.91

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 0.79
       MBOAT 126 llyta....krnfavalyalflgltylilieyvlskicakdftifkmlssaqllmrsvimrilllllllfllifdflglwlvalgedi 209
                  + t+    k+ f+ ++  ++l+l+++i+  y+ s+   + +   + ++   ++++ ++ +   +++ lf+l f       +al ++i
  EPX70661.1  88 RVTTPqtflKNEFRGFYVLFWLSLFVWIVQLYGKSYWLRNSILGLPLAR--IVFRQFFVLFGSDFVMVLFTL-F------SFALQWCI 166
                 4444455565666666666677777777777777777777776666665..466666666666666666666.3......34444444 PP

  == domain 2  score: 178.9 bits;  conditional E-value: 2e-56
       MBOAT   2 lllsyastslltllltlalsvltlqlialvlslydgleketeltedvkellklllisyfvvgflel..............................klh 70 
                 l++ ++ ++ + ++++l ++ ++  l++++ s+ ++l++++  ++++++++ l+     ++ +  +                               + 
  EPX70661.1 191 LAVCWVIHRKFPVIQCLFFTLHCAVLVMKQHSYAHHLGYMSTVRTLHETYVDLSK----KIRSSLKdesneaesvsyeleyldhtekinaikadevVAL 285
                 67889999******************************************96654....3333333788899***********************999* PP

       MBOAT  71 slslvfrklasaallsklpslleylgYvffyplllvGPilsyseymsfvesplsrllyta...krnfavalyalflgltylilieyvlskicakdftif 166
                 +++++  +l+s+  +  +p+ ++ l+Y+++   ll+ P+l ys  ++f++ + ++l y +    ++f v++ +l+l  ++++++    ++  ++ ++++
  EPX70661.1 286 TMKYLDHSLRSEIGNVIYPNNVTLLNYIDY---LLI-PSLVYS--LEFPRVSKINLKYLSvklITMFSVLFTCLAL--VDWYFLP---AAESMQGLDFV 373
                 ******************************...999.******..9**********99976555555555555544..5555555...899******** PP

       MBOAT 167 kmlssaqllmrsvimrilllllllfllifdflglwlvalgedilsGlgvngarldrvadrniygdwenavsfsefwraWNipvhkWLlryvYkplg.sk 264
                 + ls a++lm  +++ ++ l++llf+l fd++   l+a++            + + +adr++yg+w+n+v+++ef r WN pvh +L+r+vY+++  + 
  EPX70661.1 374 TKLSHAPFLMSRILFPAVILYMLLFYLTFDVI---LNAFA------------EITKFADRDFYGPWWNTVTWDEFARLWNKPVHVFLMRHVYHSSRqV- 456
                 *****************************977...66775............457899*************************************766. PP

       MBOAT 265 kfklnkslatlatFlfsAvwHglalgyliwfvlrvllllveklimrlvalsnlkfdrrrailsnvifwlgaflgpslalllylt 348
                    lnks a ++tFl+sA++H++ + +l++++lr+++l++++l+ +l++ls +  + +r++l+n +fw+g+f+gps++++ly++
  EPX70661.1 457 ---LNKSTAIFFTFLLSALVHEFVM-FLVTGKLRCYILFFQLLQLPLYKLSKMFAFEQRELLGNLFFWVGIFTGPSFICILYIV 536
                 ...**********************.********************************************************85 PP

>> MBOAT_2  Membrane bound O-acyl transferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.2       1.1     1e+04      15      33 ..     101     119 ..      83     150 .. 0.59
   2 !   28.1   4.3   2.1e-10   1.9e-06      15      82 ..     418     493 ..     407     494 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.1
     MBOAT_2  15 rrfWgrfWHqlfrrglkst 33 
                 r+f   fW  lf ++++ +
  EPX70661.1 101 RGFYVLFWLSLFVWIVQLY 119
                 5555566666666665554 PP

  == domain 2  score: 28.1 bits;  conditional E-value: 2.1e-10
     MBOAT_2  15 rrfWgrfWHqlfrrglkstakkilrlllg.....sk...larylqllvaFllSGllHaagdytqlapestallfFl 82 
                 r+f g +W+ ++   ++++ +k++++ l      s+   l++ ++++++FllS+l+H+++ + + ++ ++ +lfF 
  EPX70661.1 418 RDFYGPWWNTVTWDEFARLWNKPVHVFLMrhvyhSSrqvLNKSTAIFFTFLLSALVHEFVMFLVTGKLRCYILFFQ 493
                 789999999999999999999998887775666522567*************************998888999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (537 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       994  (0.0554409); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.32s 00:00:00.96 Elapsed: 00:00:00.51
# Mc/sec: 3142.56
//
Query:       EPX70662.1  [L=266]
Description: phosphoadenosine phosphosulfate reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.3e-45  154.7   0.0      3e-45  154.4   0.0    1.1  1  PAPS_reduct  Phosphoadenosine phosphosulfate reductase family


Domain annotation for each model (and alignments):
>> PAPS_reduct  Phosphoadenosine phosphosulfate reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  154.4   0.0   1.7e-49     3e-45       2     174 .]      47     220 ..      46     220 .. 0.98

  Alignments for each domain:
  == domain 1  score: 154.4 bits;  conditional E-value: 1.7e-49
                  EEEE--SSCTCHHHHHHHHHHCTTHEEEEEE-STB-HHHHHHHHHHHHHT.T-EEEEEE-SCHHHHHHHHHH-S-THHHC...HHHHHHTHHHHHHHH CS
  PAPS_reduct   2 lvvsvsgGkdslVllhLalkafkpvpvvfvdtghefpetiefvdeleery.glrlkvyepeeevaekinaekhgsslyee...aaeriaKveplkkaL 95 
                  l+++ + G  +lV+l++++k+  + p++f+dt h+f+eti+++d++++ y ++ ++vy+  e  +e++ a+k g++l+e+   +++ ++Kvep+++a+
   EPX70662.1  47 LFQTSALGLSGLVILDMLSKMEIKTPMIFIDTLHHFKETIDLLDQVKKVYpEVPIHVYRCAEAASEEEFAKKFGERLWEKdenKYDFLVKVEPANRAY 144
                  5677899******************************************************************************************* PP

                  HCTTECEEE----CCCTTTTTTSSSEEECTTT-SCEEE-CCCT--HHHHHHHHHHCT--B-CCCCTT-SS--BCTTB-S CS
  PAPS_reduct  96 ekldedalltGaRrdesksraklpiveidedfekslrvfPllnWteedvwqyilrenipynpLydqgfrsiGcvpctga 174
                   +ld  a++tG Rr++  +r +l +v++d     +++++Pl+nW+ ++v++yi+++n+pyn L d+g+rs+G++++t++
   EPX70662.1 145 AELDVLAVFTGRRRSQGGERGSLDVVQVDGP---VIKINPLANWSFQQVYSYIKENNVPYNVLLDRGYRSVGDYHSTQP 220
                  ******************************9...*******************************************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       676  (0.0377043); expected 358.6 (0.02)
Passed bias filter:                      537  (0.0299515); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.28s 00:00:00.76 Elapsed: 00:00:00.45
# Mc/sec: 1790.22
//
Query:       EPX70663.1  [L=269]
Description: argonaute binding protein 2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (269 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       460  (0.0256568); expected 358.6 (0.02)
Passed bias filter:                      292  (0.0162865); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1907.26
//
Query:       EPX70664.1  [L=442]
Description: WD repeat protein Crb3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      2e-15   56.9  10.8      0.002   18.9   0.2    4.7  4  WD40           WD domain, G-beta repeat
    5.3e-05   23.4   0.1        6.3    7.2   0.0    4.1  4  ANAPC4_WD40    Anaphase-promoting complex subunit 4 WD40 doma
    8.9e-05   21.4   4.4      0.024   13.4   0.3    3.3  3  Nucleoporin_N  Nup133 N terminal like
     0.0013   17.5   0.6     0.0024   16.6   0.5    1.6  1  Nup160         Nucleoporin Nup120/160
     0.0013   18.2   0.0       0.27   10.5   0.2    2.3  2  WD40_like      WD40-like domain
  ------ inclusion threshold ------
      0.016   14.2   0.1       0.18   10.7   0.0    2.5  2  Ge1_WD40       WD40 region of Ge1, enhancer of mRNA-decapping


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.1   0.00038       1.1      17      38 .]      83     104 ..      62     104 .. 0.87
   2 !   18.9   0.2   6.5e-07     0.002       2      37 ..     109     145 ..     108     145 .. 0.92
   3 !   18.5   0.1   9.3e-07    0.0028       2      38 .]     162     202 ..     161     202 .. 0.75
   4 !   13.5   0.5   3.5e-05       0.1       5      38 .]     287     320 ..     283     320 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00038
                 EEETTSSEEEEEETTSEEEEEE CS
        WD40  17 afspdgawlasGsdDgtvriWd 38 
                 a+sp  +wl+ G+++g+++iW+
  EPX70664.1  83 AVSPCDSWLVGGTEKGSLYIWS 104
                 47*******98889*******5 PP

  == domain 2  score: 18.9 bits;  conditional E-value: 6.5e-07
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                  +++ +++H ++ t+++fs+dg ++ ++s Dg + +W
  EPX70664.1 109 ALIHAFRAHyQPLTHVSFSSDGMLIHTASNDGDINVW 145
                 57899*******************878999******* PP

  == domain 3  score: 18.5 bits;  conditional E-value: 9.3e-07
                 EEEEEEESSSS.EEEEEEETTSSE....EEEEETTSEEEEEE CS
        WD40   2 qclrtltGHss.vtslafspdgaw....lasGsdDgtvriWd 38 
                 ++ r+++GH+  + sl  + +g+     l ++s+D tvr+Wd
  EPX70664.1 162 KPFRSFSGHKRaIVSL-INGSGPSissrLYTASEDSTVRVWD 202
                 6889*****5568899.555555534445789*********9 PP

  == domain 4  score: 13.5 bits;  conditional E-value: 3.5e-05
                 EEEESSSSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGHssvtslafspdgawlasGsdDgtvriWd 38 
                 +t t  s++t +  s d +++++G++ g++ +Wd
  EPX70664.1 287 HTVTSTSPITTITLSFDASLIITGDKGGSILVWD 320
                 45555567*************************9 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.2   0.0    0.0021       6.3      46      89 ..      84     126 ..      44     129 .. 0.86
   2 ?    1.7   0.0      0.11   3.3e+02      41      64 ..     121     144 ..     117     155 .. 0.85
   3 !    5.6   0.0    0.0064        19      53      88 ..     189     222 ..     186     233 .. 0.88
   4 ?    4.8   0.0     0.012        35      36      87 ..     290     340 ..     275     345 .. 0.86

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0021
  ANAPC4_WD40  46 WkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                   +p ++ L+ ++++g++ + ++ sg ++h+++++ +   t +++
   EPX70664.1  84 VSPCDSWLVGGTEKGSLYIWSILSGALIHAFRAHYQP-LTHVSF 126
                  5788999**************************9984.666666 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.11
  ANAPC4_WD40  41 vrsLaWkpdgklLavaysdgevrl 64 
                   ++++++ dg l+  a +dg +++
   EPX70664.1 121 LTHVSFSSDGMLIHTASNDGDINV 144
                  68999***************9876 PP

  == domain 3  score: 5.6 bits;  conditional E-value: 0.0064
  ANAPC4_WD40  53 Lavaysdgevrlldaesgkvvhslsvksekavtclg 88 
                  L  a +d++vr+ d+++g+++ ++  +s    +c++
   EPX70664.1 189 LYTASEDSTVRVWDVSTGNLLTTIALSSM--PSCMT 222
                  678999******************99988..67775 PP

  == domain 4  score: 4.8 bits;  conditional E-value: 0.012
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtcl 87 
                  ++ s ++ +  + d +l+  + + g++ + d+ s +v++ l   s++ vt l
   EPX70664.1 290 TSTSPITTITLSFDASLIITGDKGGSILVWDVVSRQVLRRLIQYSTS-VTFL 340
                  56789999*******************************99888885.7766 PP

>> Nucleoporin_N  Nup133 N terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.0   0.1    0.0058        17     189     232 ..     108     149 ..      94     163 .. 0.69
   2 !   13.4   0.3     8e-06     0.024     185     233 ..     158     206 ..     148     217 .. 0.79
   3 !    4.3   0.1    0.0046        14     139     234 ..     219     325 ..     210     342 .. 0.65

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.0058
                    --SSS--G----GG-EEEEEEECCTCEEEEEETTSEEEEEEEET CS
  Nucleoporin_N 189 silpgvlsgasereeivqlridssrrilytlsskgvirvydlsa 232
                    + l +++      ++++++  +s   ++ t+s++g i+v+ +s+
     EPX70664.1 108 GALIHAFR--AHYQPLTHVSFSSDGMLIHTASNDGDINVWLMSS 149
                    55555666..44456666666666689*************9994 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 8e-06
                    -...--SSS--G----GG-EEEEEEECCT...CEEEEEETTSEEEEEEEETT CS
  Nucleoporin_N 185 ssllsilpgvlsgasereeivqlridssr...rilytlsskgvirvydlsas 233
                    +   s ++ + s +  + +iv+l  +s      +lyt+s+++++rv+d+s+ 
     EPX70664.1 158 G---STVKPFRSFSGHKRAIVSLINGSGPsisSRLYTASEDSTVRVWDVSTG 206
                    3...6677777777788899999998887788******************54 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.0046
                    EEEEETTTC-EEEEETTSSEEEEEEC-SSS-CEEEEEEEEE-SSSS-...--SSS--G...........----GG-EEEEEEECCTCEEEEEETTS CS
  Nucleoporin_N 139 qvinseptgriflagstgrlyeltyrdssgwpslkckkicltkgglssllsilpgvls...........gasereeivqlridssrrilytlsskg 223
                    ++ + +p+ r++ +g+++ l+ + +  ss+ +s+   ++    +  ss+ s + g+             +  + ++i+ ++ +    +++t + +g
     EPX70664.1 219 SCMTIDPAERVIYVGNDKGLVWIPLYTSSTAHSENNPNVSKNITIPSSVPSAIGGLGRvvdaneskdahTVTSTSPITTITLSFDASLIITGDKGG 314
                    577889999999999999555555555555544444444444444444444444444455567778888445555555555555556********* PP

                    EEEEEEEETTC CS
  Nucleoporin_N 224 virvydlsasn 234
                     i v+d+ +++
     EPX70664.1 315 SILVWDVVSRQ 325
                    ******98554 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.5   8.1e-07    0.0024     229     278 ..     185     227 ..     100     325 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 8.1e-07
                 TTTEEEEEETT-EEEEEETTTTEEEEEEE--.-SSSTTS--SSEESEEES CS
      Nup160 229 gqtylfalsrdgkLrvWnlltgkclatidllrdeeaqdessskstldpae 278
                  ++ l+++s d ++rvW+++tg +l ti l+       +  s  t+dpae
  EPX70664.1 185 ISSRLYTASEDSTVRVWDVSTGNLLTTIALS-------SMPSCMTIDPAE 227
                 56779************************99.......223333444444 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.1   0.0     0.004        12      88     179 ..      84     236 ..      69     242 .. 0.76
   2 !   10.5   0.2   9.1e-05      0.27       2      61 ..     294     353 ..     293     381 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.004
   WD40_like  88 vkviddklliGtnkGsiyvfsk.dlqleevllgqsseIkeikie....................................................... 130
                 v+  d  l+ Gt+kGs+y++s     l + +  ++ ++ +++ +                                                       
  EPX70664.1  84 VSPCDSWLVGGTEKGSLYIWSIlSGALIHAFRAHYQPLTHVSFSsdgmlihtasndgdinvwlmssltdrssmagstvkpfrsfsghkraivslingsg 182
                 455566677789999999977412345566778888888888778888888888888888888888888888888899999999999999999999999 PP

   WD40_like 131 ...nnkiysLsesafi.vfdlfsqnieykisvkdiktfeii.enkdilligteg 179
                    ++++y+ se+  + v+d+ + n+++ i +  + +  +i + + ++ +g+++
  EPX70664.1 183 psiSSRLYTASEDSTVrVWDVSTGNLLTTIALSSMPSCMTIdPAERVIYVGNDK 236
                 998999999998776548899999999999998886555554777888888765 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 9.1e-05
   WD40_like   2 eiYsidiskkgslilyGgkddkctvlkleslesvsivesfedSvifvklldddlilvvtl 61 
                 +i +i +s+++sli+ G k   + v ++ s ++   + +++ Sv f k l d++  + t 
  EPX70664.1 294 PITTITLSFDASLIITGDKGGSILVWDVVSRQVLRRLIQYSTSVTFLKCLIDKVNYIPTT 353
                 68899*******************************************999986555544 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   6.1e-05      0.18     189     288 ..     120     217 ..     103     236 .. 0.63
   2 ?    0.4   0.0     0.084   2.5e+02      45      98 ..     272     324 ..     239     356 .. 0.68

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 6.1e-05
    Ge1_WD40 189 liveaafspdGtalatasedGevkffqvyledeeepr...CLheWkPhdGkslssllfldnhkeesdeqfWrfaitgadnnselklWscelWtClqtik 284
                  +++ +fs+dG  + tas+dG +  + +    +++      +  ++   G++ + + +++    +  +      + +a+++s +++W +++ + l ti 
  EPX70664.1 120 PLTHVSFSSDGMLIHTASNDGDINVWLMSSLTDRSSMagsTVKPFRSFSGHKRAIVSLINGSGPSISS-----RLYTASEDSTVRVWDVSTGNLLTTIA 213
                 58999*******************99887665544330013444444555544333333332222222.....23345555666666666666666666 PP

    Ge1_WD40 285 faps 288
                 ++++
  EPX70664.1 214 LSSM 217
                 6555 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.084
    Ge1_WD40  45 eglvrvvnketeeraLlkglkgevldlafahvsskillavdekgslfvykveev 98 
                 +gl rvv+ + ++ a     ++ ++ +++++  s  +++ d+ gs++v++v + 
  EPX70664.1 272 GGLGRVVDANESKDAHTVTSTSPITTITLSFDAS-LIITGDKGGSILVWDVVSR 324
                 6666677666666666666666777776666443.4444577777777766543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (442 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       333  (0.0185733); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 3008.60
//
Query:       EPX70665.1  [L=143]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.14   12.9  16.8      0.028   15.2  10.7    2.0  3  DTHCT       DTHCT (NUC029) region


Domain annotation for each model (and alignments):
>> DTHCT  DTHCT (NUC029) region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.3     0.029   5.2e+02       5      21 ..      20      36 ..       6      47 .. 0.52
   2 ?    1.2   0.6     0.034   6.1e+02       4      24 ..      19      39 ..      16      62 .. 0.59
   3 ?   15.2  10.7   1.5e-06     0.028      15      98 ..      59     141 ..      48     142 .. 0.78

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.029
       DTHCT  5 kakkkaeksssDsdsda 21
                k++k  e+  s+s+s+ 
  EPX70665.1 20 KKNKLHESGESSSQSSN 36
                22333233333333333 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.034
       DTHCT  4 pkakkkaeksssDsdsdagak 24
                 k++k  e+  s+s+s+ g+k
  EPX70665.1 19 QKKNKLHESGESSSQSSNGQK 39
                343444444444444444433 PP

  == domain 3  score: 15.2 bits;  conditional E-value: 1.5e-06
       DTHCT  15 sDsdsdagakk..kaaaaKgrkarKRktssssedddsdpgkktskatakKkkKkaseddddfsvdldseedseseaasRerpgRak 98 
                 s  + +++++k  +  a+Kg+ +r+R+ s s  ++  +  + +s ++++K +K+ +ed++   + +++++  +++ +sR r +R +
  EPX70665.1  59 SNVENRTEDAKerSRRAEKGK-QRRREFSPS-PSGRLNRRRDISPPPSRKRSKS-CEDEEKSPFSQEKRQYGHEKGYSRHRVSRGR 141
                 444444555553477788888.666666555.79*******************6.888888889999999999**********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1490  (0.0831056); expected 358.6 (0.02)
Passed bias filter:                      533  (0.0297284); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.28s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 973.09
//
Query:       EPX70666.1  [L=397]
Description: myb family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.9e-23   81.8   0.2    1.8e-10   40.8   0.0    2.4  2  Myb_DNA-binding  Myb-like DNA-binding domain
    1.1e-15   57.6   0.0    1.1e-06   28.8   0.0    2.4  2  Myb_DNA-bind_6   Myb-like DNA-binding domain
     0.0015   18.6   0.2       0.45   10.6   0.0    2.6  3  SLIDE            SLIDE
  ------ inclusion threshold ------
      0.019   15.1   0.0      0.058   13.6   0.0    1.8  1  SANT_DAMP1_like  SANT/Myb-like domain of DAMP1
      0.076   13.8   0.4       0.15   12.9   0.4    1.4  1  Chorion_2        Chorion family 2


Domain annotation for each model (and alignments):
>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.8   0.1   2.1e-13   7.5e-10       1      45 [.      56     105 ..      56     106 .. 0.90
   2 !   40.8   0.0   5.1e-14   1.8e-10       1      44 [.     141     188 ..     141     190 .. 0.90

  Alignments for each domain:
  == domain 1  score: 38.8 bits;  conditional E-value: 2.1e-13
                      CSSSBHHHHHHHHHHHHHHT.TCHHHHHH....HHTSS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgkWteeEdelLleavkkhG.nrWkkIae....rlggRtekqcrsrwrny 45 
                      r kWte E + Ll++++ +G ++WkkI+     ++ +R++++ ++r+r +
       EPX70666.1  56 RVKWTEKETNDLLRGCQIYGvGNWKKILMderfHFVNRSPNDLKDRFRVI 105
                      789************************777866666***********976 PP

  == domain 2  score: 40.8 bits;  conditional E-value: 5.1e-14
                      CSSSBHHHHHHHHHHHHHHTTCHHHHHH....HHTSS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgkWteeEdelLleavkkhGnrWkkIae....rlggRtekqcrsrwrn 44 
                      r+++t+eEde+Lle++ +hG +W++I++     l++R   + r+r+rn
       EPX70666.1 141 RKQFTPEEDERLLEGFFLHGPCWTRISKdaslGLQNRRSTDLRDRFRN 188
                      789*************************8855555************9 PP

>> Myb_DNA-bind_6  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.0   1.6e-09   5.6e-06       1      50 [.      59     112 ..      59     121 .. 0.81
   2 !   28.8   0.0   3.1e-10   1.1e-06       1      46 [.     144     192 ..     144     215 .. 0.85

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 1.6e-09
  Myb_DNA-bind_6   1 WteeEdeiLlklvekyg.ndWknI..aealn..rRtpkqcfdrwknkLrpkisrk 50 
                     Wte E+  Ll++++ yg  +Wk+I   e ++  +R+p++++dr++  + p+ ++k
      EPX70666.1  59 WTEKETNDLLRGCQIYGvGNWKKIlmDERFHfvNRSPNDLKDRFRV-ILPEDYKK 112
                     *****************67*****8744466668***********9.55555544 PP

  == domain 2  score: 28.8 bits;  conditional E-value: 3.1e-10
  Myb_DNA-bind_6   1 WteeEdeiLlklvekygndWknIaealn....rRtpkqcfdrwknkLrpk 46 
                     +t+eEde+Ll++ + +g  W+ I++  +    +R++++++dr++n   p+
      EPX70666.1 144 FTPEEDERLLEGFFLHGPCWTRISKDASlglqNRRSTDLRDRFRNAF-PE 192
                     79***********************96666889************44.43 PP

>> SLIDE  SLIDE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.0   0.00012      0.45      45     105 ..      52     104 ..      26     112 .. 0.78
   2 !    5.3   0.0    0.0054        19      44      78 ..     136     169 ..     119     176 .. 0.81
   3 ?   -3.8   0.0       3.5   1.3e+04      43      61 ..     278     296 ..     269     298 .. 0.52

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00012
       SLIDE  45 snkgkkeyteeeDrfllvllakyGygnyekikkeiresplFrfDwflksrtpqelqkRcet 105
                 + k ++++te+e + ll   + yG+gn++ki +    +++F+f      r+p++l+ R ++
  EPX70666.1  52 TRKPRVKWTEKETNDLLRGCQIYGVGNWKKILM----DERFHF----VNRSPNDLKDRFRV 104
                 4555788********************998865....566666....56777777777665 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.0054
       SLIDE  44 psnkgkkeyteeeDrfllvllakyGygnyekikke 78 
                 +s k++k++t eeD+ ll     +G   + +i k+
  EPX70666.1 136 ASRKERKQFTPEEDERLLEGFFLHGPC-WTRISKD 169
                 45677788**********999999876.7777665 PP

  == domain 3  score: -3.8 bits;  conditional E-value: 3.5
       SLIDE  43 ppsnkgkkeyteeeDrfll 61 
                 +  n+++++ +   D fll
  EPX70666.1 278 SFYNTDRQQPRYASDSFLL 296
                 4444444444555666665 PP

>> SANT_DAMP1_like  SANT/Myb-like domain of DAMP1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.6e-05     0.058      27      73 ..      57     103 ..      45     108 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.6e-05
  SANT_DAMP1_like  27 edWtkeetdyLfdlckeydl.rf..vviaDryelekkkkrsledlkeryY 73 
                       +Wt++et+ L++ c+ y +  +  +++ +r+++    +rs +dlk+r+ 
       EPX70666.1  57 VKWTEKETNDLLRGCQIYGVgNWkkILMDERFHF---VNRSPNDLKDRFR 103
                      47****************764453388899***9...799********95 PP

>> Chorion_2  Chorion family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.4   4.1e-05      0.15      25      70 ..     202     243 ..     184     264 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 4.1e-05
   Chorion_2  25 grgrG.nrgYgrsvesgrrygdsspsdseaislaklalAapeagsye 70 
                 +++ G + +Y++s     +y+   ps+ ea+++a +a Aa +a + e
  EPX70666.1 202 KNNPGlRPKYDQS-----NYLMNDPSSTEAAAAAVAAVAAVAADRQE 243
                 6778888899999.....****************9999999886633 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (397 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       675  (0.0376485); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.48
# Mc/sec: 2490.19
//
Query:       EPX70667.1  [L=253]
Description: respiratory complex assembly protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.6e-41  140.8   0.8    4.6e-41  140.4   0.8    1.0  1  MBA1      MBA1-like protein
    0.00011   22.4   0.0    0.00033   20.8   0.0    1.7  2  Tim44     Tim44-like domain


Domain annotation for each model (and alignments):
>> MBA1  MBA1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.4   0.8   5.1e-45   4.6e-41       4     217 ..      38     245 ..      36     252 .. 0.92

  Alignments for each domain:
  == domain 1  score: 140.4 bits;  conditional E-value: 5.1e-45
        MBA1   4 qkkiqqlnikhlgvaaelyvptsylkspftspkvwvkllirrlyllglNtvqvalfrlqtglkpsflewknkAietyvkvNkafAareleqleelvslw 102
                 q+ i+ l+i++++++ e+ ++ s++ +p+++++ w+++l +r  ++ +  + +   r ++ + + +  ++ +A++ ++ vN a+A+++++ le++++++
  EPX70667.1  38 QQPIRMLDIPFMQCYVEPKDNYSLMTHPIKKVRQWWRSLRYRNINIYKSRYYLR--RNFPSRTFTMKSIIGEAVRLHSSVNSALASHDSQVLENNCTIR 134
                 6778899*********************************************99..******************************************* PP

        MBA1 103 vkeaLkarakqlPdnvkldwelikfnsvPKlvslqalmipgkple.lvqlvyrfdtkQklikvdkksskvekldrdvvdyiaflldattn..ellLvGs 198
                  ++ L +++kqlP   k++w+++k+ s PKl++++ ++++ ++ e ++q+v+r++t Q++  +d+ s+    l  + ++++++++ ++    +++ +G 
  EPX70667.1 135 AAQLLRKQSKQLP---KCQWKIEKYLSPPKLLNITCAQADMQGNEcFIQAVVRLHTLQSV-SLDQASPSSTHLK-EEIENVVIQQCSWIPpvRWQFWGL 228
                 *************...*******************************************9.*****99999988.88999****99**99999999996 PP

        MBA1 199 v...feskvdaklPkktetdsq 217
                 v   +e++v++klP+     +q
  EPX70667.1 229 VsstPETAVKKKLPD-----GQ 245
                 611155556666664.....44 PP

>> Tim44  Tim44-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       0.3   2.7e+03      51      77 ..      58      84 ..      56      87 .. 0.85
   2 !   20.8   0.0   3.6e-08   0.00033      14     104 ..      98     192 ..      95     207 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.3
                HHHHHHHHHHHHHHTT-EE--EEEEEE CS
       Tim44 51 vyeefkaeikerakqgltldaellgir 77
                 y+ +++ ik+ +++ + l+ ++++i 
  EPX70667.1 58 NYSLMTHPIKKVRQWWRSLRYRNINIY 84
                5788999999999***99999999985 PP

  == domain 2  score: 20.8 bits;  conditional E-value: 3.6e-08
                 T--HHHHHHHHHHTHHHHHHHHHHT-HHHHHHHB-HHHHHHHHHHHHHH..HHTT-EE--EEEEEEEEEEEEEEEE..TTEEEEEEEEEEEEE-E CS
       Tim44  14 sFdkeeFleeakeayepileayakgDletLrkllteevyeefkaeiker..akqgltldaellgirevdlkeakie..gdtavltvrfrtqqisv 104
                 +F++++ + ea ++   ++ a+a  D ++L++++t ++ + + ++ k+    ++++ +  +  ++ ++ +++a ++  +   +++vr++t q   
  EPX70667.1  98 TFTMKSIIGEAVRLHSSVNSALASHDSQVLENNCTIRAAQLLRKQSKQLpkCQWKIEKYLSPPKLLNITCAQADMQgnECFIQAVVRLHTLQSVS 192
                 78889999999999999*******************************986799**********************4444567889998877655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (253 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       510  (0.0284455); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.31s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 1666.48
//
Query:       EPX70668.1  [L=456]
Description: choline kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.7e-53  181.3   0.5    2.3e-53  180.9   0.5    1.2  1  Choline_kinase  Choline/ethanolamine kinase
    7.2e-06   25.6   0.1    1.9e-05   24.2   0.1    1.7  1  Choline_kin_N   Choline kinase N terminus
    1.2e-05   25.4   0.0    3.4e-05   23.9   0.0    1.8  1  APH             Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Choline_kinase  Choline/ethanolamine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  180.9   0.5   3.9e-57   2.3e-53       4     212 ..      87     313 ..      84     314 .. 0.85

  Alignments for each domain:
  == domain 1  score: 180.9 bits;  conditional E-value: 3.9e-57
                     EEEEEEE-TTCTTCCHHHHHHHHHHHHHHTTSSS-EEEEETTEEEEE--TCEE--TTGGGCHHHHHHHHHHHHHHTTCHH...TTSSSS-HHHHH CS
  Choline_kinase   4 kvllRiygkkteelidretElvvfallserglgpklygifenGrieefiesrtlstedlrepeiskkiAkklaelHslel..eseskespslwkt 96 
                     k+llRiyg++ e +i+r tEl+++++l+++++gp+l+g f nGr+e+++es+tl++e +r+p  s  +A+++ elH++    + e+ e p+ wk 
      EPX70668.1  87 KLLLRIYGPNAEMFINRLTELENLKRLAKHSIGPRLLGEFGNGRFEQYMESTTLTAETIRDPVRSIYVARRISELHNVIQltPTEQYELPNAWKF 181
                     89**************************************************************************9877677889999****** PP

                     HHHHHHCCS.TT..ECHHGGCCHCCCTH....HHHHHHHHTHHHHHH.CHGG-...EEEE-S--SGGGEEE...........-CTTEEEE--GTT CS
  Choline_kinase  97 mqkwllnkeaqtkakkekkkkqlklinl....edlekelekleklle.elesp...vvfcHnDlqegNill..........nkeekklvlIDFEY 173
                     + +w     a+++ +++ +  +++   l    +d+ + ++++ ++ + +++ +    vf+HnD+q+gNil+          +++++ lv +DFEY
      EPX70668.1 182 CFSW--LPLARKNLQNRRHPLSITVNFLddfgKDFYQYFQWFSNWSNdKKQWTslqNVFSHNDTQYGNILQiktkrrslkpENKHHILVPVDFEY 274
                     ****..444444444444444444444500005555555555555533333337779***********************9999999******** PP

                     -EEEEHHHHHHHHHHHTTEEHHHCSTSHEE-GGGS--HH CS
  Choline_kinase 174 agynyrgfDlanhfiEwagdyeeeeaffkldyskypsre 212
                     ag+n r++Dlan+f+Ew+++y+++++ + ++ s+yp+ e
      EPX70668.1 275 AGPNVRAYDLANYFAEWMANYHHPTHSHLMNRSRYPTFE 313
                     ************************************976 PP

>> Choline_kin_N  Choline kinase N terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.1   3.2e-09   1.9e-05       4      47 ..      12      55 ..      11      58 .. 0.96

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 3.2e-09
  Choline_kin_N  4 sdedelvpsvdavLDnskpsdyFKeeilrLlhtLalkgWrdvpl 47
                   +d++ + +++++ L   +p+ +F++++l  +h+La++ W +vp+
     EPX70668.1 12 FDHTYVSKKCKSLLHSDDPDHVFRHKVLLAIHKLAIPTWSRVPA 55
                   79999*************************************97 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.0   5.7e-09   3.4e-05       2     217 ..      63     296 ..      62     330 .. 0.66

  Alignments for each domain:
  == domain 1  score: 23.9 bits;  conditional E-value: 5.7e-09
                 EEEE--.SSCEEEEEEETT-....-EEEEEE-TTS-HHHHH..HHHHHHHHHHHTT-B--B-CTTBS-EEETTEEEEEEE----EE-SSHHHHHHHHHH CS
         APH   2 vrelsggasnrtylvttpag....ryvlrrnpparaaeeir..revallrlLakagvpvPevlagdtddeeigllfalieyvpgrsllrklsaaqlpel 94 
                 ++++sg + n +y++  p+g    +++lr++ p  a+ +i    e++ l+ Lak+ +  P++l    ++ ++   +   + + ++++++       + +
  EPX70668.1  63 IQRISGALTNAVYYIAPPEGfkaiKLLLRIYGPN-AEMFINrlTELENLKRLAKHSI-GPRLLGEFGNGRFE--QYMESTTLTAETIRD-----PVRSI 152
                 6789999************99999999*******.66666533799999********.99***932222222..344444444444444.....35555 PP

                 HHHHHHHHCCHHCH.-STTTB-SHHCHTCCHH..........HHHHCHHHCCCGCCTCCHHHHHHHH.........HHHHHHHH--SSS-EEEE-SS-S CS
         APH  95 lealgeflaalhqvdpaalpladflaqdlell..........rqlesatarllaselldlleeleeq.........vlaalaallpgelptvllHgDlh 174
                 +  +++ + +lh+v  +  p + ++ ++++ +           + +++++ ++  ++ld   ++ +           +   ++ +  +l+ v+ H+D  
  EPX70668.1 153 Y--VARRISELHNV-IQLTPTEQYELPNAWKFcfswlplarkNLQNRRHPLSITVNFLD---DFGKDfyqyfqwfsNWSNDKKQWT-SLQNVFSHNDTQ 244
                 5..89999999999.55555555553333311222221111111122222333333333...444445555554444444444444.7*********** PP

                 GGGEEEC...........TTEEEEE---TT-EEEECCHHHHCCHHHCSCHCC CS
         APH 175 pgNllvd.........pddgrvtGviDfedaglgpplyDlavllrswtseld 217
                  gN+l           ++++++   +Dfe+ag+  ++yDla   + w+ + +
  EPX70668.1 245 YGNILQIktkrrslkpENKHHILVPVDFEYAGPNVRAYDLANYFAEWMANYH 296
                 *****999*******88888888889***************99966887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (456 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       545  (0.0303977); expected 358.6 (0.02)
Passed bias filter:                      429  (0.0239277); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.31s 00:00:00.90 Elapsed: 00:00:00.50
# Mc/sec: 2743.97
//
Query:       EPX70669.1  [L=508]
Description: RNA-binding protein M [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.3e-22   77.2   0.2    1.2e-08   34.7   0.0    3.3  3  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
      6e-07   29.1   0.0      0.029   14.0   0.0    2.3  2  RRM_5     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
     0.0015   18.6   0.0       0.95    9.5   0.0    2.5  3  RRM_3     RNA binding motif
  ------ inclusion threshold ------
       0.11   12.8   0.8       0.31   11.3   0.8    1.8  1  SIC       sic protein repeat
       0.26   11.0   3.6       0.44   10.2   3.6    1.3  1  DUF2981   Protein of unknown function (DUF2981)


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.7   0.0   3.2e-12   1.2e-08       1      70 []      43     114 ..      43     114 .. 0.95
   2 !    4.6   0.0    0.0081        29       7      61 ..     132     181 ..     131     185 .. 0.80
   3 !   34.2   0.0   4.4e-12   1.6e-08       1      68 [.     338     404 ..     338     406 .. 0.89

  Alignments for each domain:
  == domain 1  score: 34.7 bits;  conditional E-value: 3.2e-12
                 EEEESETTTSSHHHH....HHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1   1 lfVgnLppdvteeeL....kelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrelk 70 
                 lfVg L+++++e++L    k++F+k+Gp  ++k+ +d     + + fV+F++  dA  Al+  ++  l++r+++
  EPX70669.1  43 LFVGSLNSSLSESQLtvsvKTFFQKYGPLLHVKVLKD--WLQRSYSFVQFANANDASTALKDAQNALLDDRRIR 114
                 8************9877779****************9..9999****************************996 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.0081
                 TTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTT CS
       RRM_1   7 ppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealng 61 
                 p++ + +++  l++++G i++    +     s g+  V+F  ++dA +A  +l +
  EPX70669.1 132 PFNFSSSDVQHLLQPYGLIEEQVKTK----DSSGY-LVRFVYRDDAISAFLNLRN 181
                 677888999999999**995544444....59999.9**********99988876 PP

  == domain 3  score: 34.2 bits;  conditional E-value: 4.4e-12
                 EEEESE.TTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEE CS
       RRM_1   1 lfVgnL.ppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggre 68 
                 +f+  L +++++++ + elFs++G++ ++kl+r+    +  faf +F+s+ +A +A+ +     +++++
  EPX70669.1 338 IFIDHLdSKNCSRNSIVELFSQYGKVLDCKLIRQ--SDKPAFAFLQFDSQQAAVNAVYHKPQPFFQKKP 404
                 788889899************************6..99999***************9987776666665 PP

>> RRM_5  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.0   7.9e-06     0.029      43     106 ..      60     125 ..      27     142 .. 0.81
   2 !   12.7   0.0     2e-05      0.07      31      98 ..     340     409 ..     326     432 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 7.9e-06
       RRM_5  43 klFnlfclYgnvervkflkt..kketalvqmgdasaveravqHLnnaklfgkrlevalSKqqavse 106
                 ++  +f  Yg + +vk+lk   ++ +++vq ++a ++ +a++  +na l ++r+++ + K +   +
  EPX70669.1  60 SVKTFFQKYGPLLHVKVLKDwlQRSYSFVQFANANDASTALKDAQNALLDDRRIRIEPAKVNRTIY 125
                 45678999***********8557899********************************99886544 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 2e-05
       RRM_5  31 VyglepdkvnldklFnlfclYgnvervkflkt..kketalvqmgdasaveravqHLnnaklfgk.rleval 98 
                 +  l+ +++  +++  lf++Yg v   k++++  k+  a++q  +++a+  av H   ++ f k +l+v++
  EPX70669.1 340 IDHLDSKNCSRNSIVELFSQYGKVLDCKLIRQsdKPAFAFLQFDSQQAAVNAVYHKP-QPFFQKkPLRVKF 409
                 667999999999******************8534889999*************9965.5555554788776 PP

>> RRM_3  RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0   0.00026      0.95      15      69 ..      58     113 ..      41     123 .. 0.75
   2 ?   -2.9   0.0         2     7e+03      35      58 ..     156     180 ..     138     196 .. 0.72
   3 !    6.2   0.0    0.0029        10      10      54 ..     345     392 ..     338     413 .. 0.69

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00026
                 HHHHHHHCHCCS-ECEEEE-TT...SSEEEEEESSHHHHHHHHHHHHHC-B-CCTSSE CS
       RRM_3  15 redikellsklgevayvdyekg...dkegevrFkedeeakkalekateaklkikdaev 69 
                   ++k++++k+g++ +v + k+    + + v+F+++++a  al+ a +a   ++d  +
  EPX70669.1  58 TVSVKTFFQKYGPLLHVKVLKDwlqRSYSFVQFANANDASTALKDAQNA--LLDDRRI 113
                 4589***************998433566889999999999999999988..4444444 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2
                 TTSSEEE.EEESSHHHHHHHHHHHH CS
       RRM_3  35 kgdkege.vrFkedeeakkalekat 58 
                   d++g+ vrF   ++a  a+ ++ 
  EPX70669.1 156 TKDSSGYlVRFVYRDDAISAFLNLR 180
                 4566665478988888877776655 PP

  == domain 3  score: 6.2 bits;  conditional E-value: 0.0029
                 SSS--HHHHHHHCHCCS-E...CEEEE-TTSSEEEEEESSHHHHHHHH CS
       RRM_3  10 nkelsredikellsklgev...ayvdyekgdkegevrFkedeeakkal 54 
                 +k+ sr++i el+s++g+v   + +  ++  + + ++F+++++a +a+
  EPX70669.1 345 SKNCSRNSIVELFSQYGKVldcKLIRQSDKPAFAFLQFDSQQAAVNAV 392
                 67889************8722245555555556667777776665554 PP

>> SIC  sic protein repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.8   8.5e-05      0.31       2      19 ..     280     297 ..     279     300 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 8.5e-05
         SIC   2 DWssdkkveTedkTRPPY 19 
                 D s +k   T ++T PPY
  EPX70669.1 280 DMSTPKNTMTSPYTSPPY 297
                 7799************** PP

>> DUF2981  Protein of unknown function (DUF2981)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   3.6   0.00012      0.44     101     218 ..     172     298 ..     149     316 .. 0.65

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00012
     DUF2981 101 kseaflrkrklpddkkllpddiskastdennlpdaklrvpqneespikqhvrsdvnspantaelatidaalrdlekakklire.............tat 186
                 + +afl+ r++p  k+l  +++s++s+ +n+lp++++r+ + ++ p k   +s  +     +++  ++ + r+l + k++ ++             ++ 
  EPX70669.1 172 AISAFLNLRNSP-YKVLWAENVSTKSVFRNKLPNSSFRHHHPNTRPSKSFSSSSSSRS---TSASLSQNSQRKLSSLKTFPNSsnvssfppstpisSSL 266
                 5679********.99*************************999999985443322222...22222333333333333333333344466777777666 PP

     DUF2981 187 kvpvgaasskipkeatlPetkekevkasslpa 218
                 ++p+ a++ +   ++++P++ +++  +s +  
  EPX70669.1 267 TTPTSATNYDESSDMSTPKNTMTSPYTSPPYS 298
                 67777777777777777766665544443333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (508 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       891  (0.049696); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.61u 0.29s 00:00:00.89 Elapsed: 00:00:00.52
# Mc/sec: 2935.97
//
Query:       EPX70670.1  [L=185]
Description: CHCH domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.9e-09   35.8  14.4    1.1e-08   35.4  14.4    1.1  1  DUF2076   Uncharacterized protein conserved in bacteria (DUF2
     0.0009   19.3   4.7     0.0016   18.6   4.4    1.5  1  CHCH      CHCH domain
  ------ inclusion threshold ------
       0.11   12.8   0.7       0.11   12.8   0.7    1.9  2  COX17     Cytochrome C oxidase copper chaperone (COX17)
        0.3   11.1   4.1        0.5   10.4   4.1    1.3  1  CX9C      CHCH-CHCH-like Cx9C, IMS import disulfide relay-sys


Domain annotation for each model (and alignments):
>> DUF2076  Uncharacterized protein conserved in bacteria (DUF2076)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.4  14.4   2.5e-12   1.1e-08     104     220 ..      20     141 ..       4     169 .. 0.51

  Alignments for each domain:
  == domain 1  score: 35.4 bits;  conditional E-value: 2.5e-12
     DUF2076 104 qpspqarpaapagqalgqeeqyaaqpgyaqqqaqpqygqpaaapq....p.ggGggFLggAlqtAAGV....aGGvllangleslfsgksgeegaasas 193
                 +++p+++ aapa+ a++   + +a p +  +q+qpq++++++a++    p +gG+gF+g+  +tAAGV    a G  ++n+l++ f+g+s+++ a +++
  EPX70670.1  20 STRPASTMAAPASMASAPSAARPAGPSA--SQQQPQQQSATPAAPptaiPsSGGTGFFGNMVSTAAGVgigsAIGHTMGNMLTGAFGGGSSNSSAPAGQ 116
                 2233333333433333333333333333..4555555544444443355279****************7555668889999999999977655444433 PP

     DUF2076 194 qsaeeeeiinnyy..ssssladdaedadn 220
                 +s++ +    +++  s    + + +da+ 
  EPX70670.1 117 ESNNATAAQAESGfgS----TTAFADANA 141
                 3322222222222221....111122221 PP

>> CHCH  CHCH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   4.4   3.5e-07    0.0016       1      33 [.     148     178 ..     148     179 .. 0.94

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 3.5e-07
                 THHHHHHHHHHHHHCTSSTTTTHHHHHHHHHHH CS
        CHCH   1 CgeefkeylkClkdnsdefskCrkefeafkeCv 33 
                 C  e k + +C+++++  f++C++++e++k+C+
  EPX70670.1 148 CNGEAKTFAECMNQHG--FDHCSYYLEQLKACQ 178
                 778999**********..7*************8 PP

>> COX17  Cytochrome C oxidase copper chaperone (COX17)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.7   2.5e-05      0.11      26      47 ..     142     165 ..     135     166 .. 0.81
   2 ?    0.1   0.2      0.23     1e+03      29      40 ..     166     177 ..     165     179 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2.5e-05
       COX17  26 eee..kCkelieahkaCmrslGFk 47 
                 ee+  +C+   + + +Cm+++GF+
  EPX70670.1 142 EESkrACNGEAKTFAECMNQHGFD 165
                 333469*****************7 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.23
       COX17  29 kCkelieahkaC 40 
                 +C+ ++e+ kaC
  EPX70670.1 166 HCSYYLEQLKAC 177
                 799999999999 PP

>> CX9C  CHCH-CHCH-like Cx9C, IMS import disulfide relay-system,
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   4.1   0.00011       0.5       5      40 ..     145     178 ..     142     179 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00011
        CX9C   5 akyCpkefeaYhkCvssnqswpekCkeqkkeLakCi 40 
                  + C  e +++  C+ ++    ++C  + ++L  C 
  EPX70670.1 145 KRACNGEAKTFAECMNQH--GFDHCSYYLEQLKACQ 178
                 689*************99..***************5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       813  (0.0453455); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 1251.49
//
Query:       EPX70671.1  [L=482]
Description: citrate synthase Cit1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.6e-99  331.6   0.0    2.3e-98  329.6   0.0    1.7  2  Citrate_synt  Citrate synthase, C-terminal domain


Domain annotation for each model (and alignments):
>> Citrate_synt  Citrate synthase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.03   5.4e+02     114     140 ..      23      49 ..       7      68 .. 0.74
   2 !  329.6   0.0  1.3e-102   2.3e-98       1     361 []      89     468 ..      89     468 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.03
                   HHHHHHHHHHHHHHHHHHHHHHHHTTS CS
  Citrate_synt 114 aalrdalkliAklptiaaaiyrarlgr 140
                   + l ++++l +klpt aaa y+  +g+
    EPX70671.1  23 SSLFSQASLRSKLPTTAAASYSTIKGG 49 
                   55667788999**********998873 PP

  == domain 2  score: 329.6 bits;  conditional E-value: 1.3e-102
                   GGTTEEEEEESSEEEETTTTEEEETTEEHHHHH........HHHS-.HHHHHHHHHHSS---HHHHHHHHHHHHCTTS--HHHHHHHHCSSTTS-HH CS
  Citrate_synt   1 glrgvaaleteisevdgekgelrYRGydieeLa........eekss.feevaylLltgelPtkeelkefkeelaearklpekvlealealpkdahpm 88 
                   g rg+ +l +e s +d+++  +r+RGy+i+e +        ++k++  e  ++lL+tge+Pt ++++++++e+a++++lp+ v e +++ p ++hpm
    EPX70671.1  89 GARGIRSLVWEGSVLDPSE-GIRFRGYSIPE-CqkllpsspNGKQPlPESLFWLLVTGEIPTLSQVQSLSAEWAARSQLPKFVEELIDRCPPSLHPM 183
                   57899999*******9444.3**********.77*******55666266678889****************************99999********* PP

                   HHHHHHHHHHHHHSTT......CTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS.-----.TTSSHHHHHHHHHHSS---HHHHHHHHHHHHH CS
  Citrate_synt  89 avlraavsalsaddee......seakeeseeaalrdalkliAklptiaaaiyrarlgreplepd.dklsyaenflymlrgkkpdeeeaklldlalvl 178
                   a+++ a++al++d+        + +k+++++++++d+++liAk + ia +iyr+ + +  ++p   +++++ nf+++l g   + e+++l++l+l l
    EPX70671.1 184 AQFSLAITALEHDSAFakayehGLSKHDYWKYTYEDCMDLIAKTVPIAGRIYRNIYRDGIVAPIqLDKDHSYNFANVL-GFANNSEFVELMRLYLSL 279
                   *********8887776655554666666****************************875555444569**********.546789************ PP

                   HS--SS.SHHHHHHHHHHTTT--HHHHHHHHHHHHTSTTTTTHHHHHHHHHHHHSSGG........GHHHHHHHHHHTTTS--TTBC-SSSSS--HH CS
  Citrate_synt 179 haDHel.naSTfaarvvaStladlysaiaagigalkGplhgganeavlkmleeigsaev.......eveeylekvlakekerlpGfGHrvykksDpR 267
                   h DHe+ n+S+++ ++v+S+l+ ++ ++aa++++l+Gplhg an++vl +l+ + ++e+       +++ yl++ l+++ +++pG+GH+v++k+DpR
    EPX70671.1 280 HSDHEGgNVSAHTGHLVGSALSSPFLSMAASLNGLAGPLHGLANQEVLSFLNTM-KEEIgddlsdeRIKGYLWDLLKSG-RVVPGYGHAVLRKTDPR 374
                   ******************************************************.77788999**************96.***************** PP

                   HHHHHHHHHHHHTCHTHHHHHHHHHHHHHHHHHHHHCHH.GCT-EB-THHHHHHHHHHTT--GGG.HHHHHHHHHHHHHHHHHHHHH.HT------E CS
  Citrate_synt 268 akilkelaeelaeekgkdpllklaeeleevapevlkeke.eknlypNvDfysgvlyralgipeel.ftvlfaisRvaGwlAhileql.adnkiiRPr 361
                   +++++e+a+e+     kdp+++l+++l+ev+p+vl+e+  +kn++pNvD +sg+l++++g++e+  +tvlf++sR++G+ +++++ +     i+RP+
    EPX70671.1 375 YTAQREFAQEYLP---KDPMFQLVSRLYEVVPSVLTEHGkTKNPFPNVDSHSGILLQYYGLKEQNfYTVLFGVSRTLGVASQLIWDRaLGFPIERPK 468
                   **********997...8*******************9999**********************9855*******************8755577***96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (482 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       372  (0.0207485); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3376.59
//
Query:       EPX70672.1  [L=271]
Description: hypothetical protein SOCG_04284 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        0.1   12.6   0.1       0.19   11.8   0.1    1.4  1  DUF627    Protein of unknown function (DUF627)


Domain annotation for each model (and alignments):
>> DUF627  Protein of unknown function (DUF627)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1     1e-05      0.19      40     106 ..     147     234 ..     135     236 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 1e-05
      DUF627  40 tifvklakktedpdvkfayllasvecfseavels.....................rfyArsLfelasqlgsklyYkkavkkakraLsv 106
                 ++f++   ++ d+  +  y++ +++ +   v +s                     + +A+ L+ l ++l+++ yY k+ ++ +  L++
  EPX70672.1 147 EMFMRKGLELVDQLYDLLYFQTTLQFAMARVPFSitglqnlnllvstlqkqaislSSTATALIPLQEELEQVNYYHKCWQRVHTVLTI 234
                 5666666666666677777777777777777777777777777777777777778999**********************99988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (271 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1031  (0.0575046); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 1891.29
//
Query:       EPX70673.1  [L=1035]
Description: P-type ATPase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.2e-48  164.6  17.3    3.2e-48  164.6  17.3    2.2  2  PhoLip_ATPase_C  Phospholipid-translocating P-type ATPase C-t
    8.6e-16   57.4   1.6    8.6e-16   57.4   1.6    2.3  3  PhoLip_ATPase_N  Phospholipid-translocating ATPase N-terminal
    3.1e-13   49.6   0.0    9.2e-13   48.1   0.0    1.8  1  E1-E2_ATPase     E1-E2 ATPase
    6.9e-11   42.8   1.2    2.9e-06   27.7   0.3    3.7  3  Hydrolase        haloacid dehalogenase-like hydrolase
    1.5e-09   37.8   0.0    1.4e-08   34.7   0.0    2.3  2  Cation_ATPase    Cation transport ATPase (P-type)
    0.00092   19.0   0.0      0.002   17.9   0.0    1.5  1  Hydrolase_3      haloacid dehalogenase-like hydrolase
  ------ inclusion threshold ------
      0.039   13.4   0.2       0.11   12.0   0.2    1.7  1  DUF4392          Domain of unknown function (DUF4392)
       0.11   12.9   0.1       0.27   11.6   0.1    1.6  1  FAM219A          Protein family FAM219A


Domain annotation for each model (and alignments):
>> PhoLip_ATPase_C  Phospholipid-translocating P-type ATPase C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.3      0.23   5.1e+02     154     174 ..     320     340 ..     248     381 .. 0.51
   2 !  164.6  17.3   1.4e-51   3.2e-48       2     249 .]     799    1028 ..     798    1028 .. 0.96

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.23
  PhoLip_ATPase_C 154 gtlvftalvlvvnlkvaletk 174
                       +++ + +++v  l v+l ++
       EPX70673.1 320 NFYSKILCMIVLALSVILTFS 340
                      222223333333333333222 PP

  == domain 2  score: 164.6 bits;  conditional E-value: 1.4e-51
  PhoLip_ATPase_C    2 raSDyaiaqFrfLkrLLlvhGrwsyrRisklilyffyKnvvftlvqfwfqfyngfsgqslyeswlltlynllftslpvivlgifdqdvsael 93  
                        a+Dy+i++F+++ rLLl+hGr sy+ +skl ++++++ ++++++q++++++++f    l++++ll+ y +++t+lpv+ + ++d+dvs++l
       EPX70673.1  799 LAADYSIKEFSHIARLLLWHGRISYKQTSKLAMFVIHRGLIISICQVVYSIISNFEPIALFQGLLLVGYSTMYTMLPVFSI-VYDRDVSEKL 889 
                       69*****************************************************************************99.********** PP

  PhoLip_ATPase_C   94 llkyPelYklgqknklfnlktfllwileglyqsliifflsylvlddssfsdgktndlqlfgtlvftalvlvvnlkvaletktwtliliilil 185 
                       +  +PelYk+ +++k f++k+f+ ++l ++yq++ii +++y++++  +          ++ +++f++l+l  +++val++++w+ +++++ +
       EPX70673.1  890 VFLFPELYKEMREDKCFSIKSFMSCVLISIYQGVIIQVITYVLVGFDVE--------GEMLAVCFSCLILNELIMVALQINRWDQTIVMSEM 973 
                       *******************************************987543........578899***************************** PP

  PhoLip_ATPase_C  186 gsillyflflllyssllpsssefygvleelfsspsfwlvlllvvvvallpdllikvlkrtffps 249 
                       +s+++y l++ +++ ++         + ++f  ++f++v +l+++++llp +  ++lk+ ++ps
       EPX70673.1  974 LSLMIYTLSVPFLTDYF---------DLKFFLGLKFYWVSALILFISLLPVWSGRALKQKLKPS 1028
                       *************9954.........6789999**************************99996 PP

>> PhoLip_ATPase_N  Phospholipid-translocating ATPase N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.4   1.6   3.8e-19   8.6e-16      15      65 ..      92     142 ..      79     144 .. 0.90
   2 ?   -3.3   0.1       3.4   7.6e+03       9      19 ..     166     176 ..     160     177 .. 0.69
   3 ?   -2.9   0.1       2.6   5.8e+03      19      31 ..     517     529 ..     516     531 .. 0.84

  Alignments for each domain:
  == domain 1  score: 57.4 bits;  conditional E-value: 3.8e-19
  PhoLip_ATPase_N  15 asNkIsTsKYtlltFlpknLfeqFrrvaNlYFLviailqliPqisplspvt 65 
                       +N+++++KY +++Flpk LfeqFr + N+YFL++++ qliP ++     t
       EPX70673.1  92 GTNAVTNTKYDAFSFLPKCLFEQFRYFYNMYFLLVSLSQLIPPLKIGYLST 142
                      58****************************************988766555 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 3.4
  PhoLip_ATPase_N   9 nekkkyasNkI 19 
                      +++ +ya+N+I
       EPX70673.1 166 RRRDSYANNEI 176
                      44459****99 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 2.6
  PhoLip_ATPase_N  19 IsTsKYtlltFlp 31 
                      I+Ts Y++l+ +p
       EPX70673.1 517 INTSSYEILQLFP 529
                      89999*9998877 PP

>> E1-E2_ATPase  E1-E2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.1   0.0   4.1e-16   9.2e-13      19     170 ..     185     373 ..     164     380 .. 0.91

  Alignments for each domain:
  == domain 1  score: 48.1 bits;  conditional E-value: 4.1e-16
                   EGGG--TTSEEEEETT-B--SEEEEEE...E-S.EEE-TTTS---S-EE-.....................................G-TTEE-TT- CS
  E1-E2_ATPase  19 dakelvpGDivllkagdrvpaDgrive...gsa.evdesaLTGEslpvek.....................................ekgdmvfsGt 74 
                    a+++++GD+vl+ + +rvpaD+++++   g++  + + +L GE  +  +                                     +  +++ + t
    EPX70673.1 185 TAQNIQVGDVVLISKDQRVPADMVLMHtsvGNEaFIRTDQLDGETDWKLRipcsnqyshgiihadspiksvhhfygtftlndnrrplTVDNTLWANT 281
                   5899***********************7775557*************999**********************************9999********* PP

                   EEEE-EEEEEEEE-TTTSTTTTTSTTS--------HHHHHHHHHHHHHHHHHHHHHHHHHHS-STTTSSTTHHHHHHHHHHHHHS-TTHHHHHHHH CS
  E1-E2_ATPase  75 vvvsgeakavVtatgedtelgkiarlveeakskktplqkkldklgkvlvpvvlliallvflialllgkslaeallralallvaaiPcaLplavpla 170
                   v  s  + +vV+ tg+dt+ +      ++ak k   l+k+++ ++k+l ++vl++++++ + + +++++   a++r l l+ ++iP+ L + + +a
    EPX70673.1 282 VLASEAVYGVVIYTGKDTRQS---LNSSKAKTKVGLLEKEINFYSKILCMIVLALSVILTFSHGIRENWY-IAIFRYLILFSSIIPINLRVNLDIA 373
                   ******************754...3455666889****************************99988887.9***************998766655 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0         1   2.3e+03     136     157 ..     193     216 ..     185     230 .. 0.73
   2 !   27.7   0.3   1.3e-09   2.9e-06       3     193 ..     406     713 ..     404     719 .. 0.65
   3 !    9.5   0.0    0.0005       1.1     160     210 .]     732     784 ..     719     784 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 1
                 EEEEEESSEHHHHH.HHHHH.TTG CS
                 xxxxxxxxxxxxxx.xxxxx.xxx RF
   Hydrolase 136 evvlltgdnpetae.raanq.lGd 157
                 +vvl++ d++ +a+  +++  +G+
  EPX70673.1 193 DVVLISKDQRVPADmVLMHTsVGN 216
                 69***********97777777773 PP

  == domain 2  score: 27.7 bits;  conditional E-value: 1.3e-09
                 EEEEESBTTTBCHHHHHHHHHHHH.............................CHHHHHHHHHH.......HHCHHHHHHHHHHHHHHHHHHHHHHETT CS
                 xxxxxxxxxxxxxxxxxxxxxxxx.............................xxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase   3 tvvfDkdGTLttgepsvedvivsa.............................alalaaaletg.......sehpigkalvaaakarsgaltgfatfig 65 
                  ++ Dk+GTLt+ e++++++   +                             +l +  +l+++       se+  g     aa   + a+ +++ + g
  EPX70673.1 406 YLLTDKTGTLTQNEMELKKLQLGVvgfsnesmdvvqacvnestahiplsddtkDLVRETVLALSlchnvtpSETTDGSVSFQAASPDEVAIVRWTSSMG 504
                 6789**********9999955555444455555555556666677777777665555555555566777664444444443333333444444444222 PP

                 TE...........................................HHHHTHHHHHHHH.HCHHHHHHHHHHHHHHCHHHHHH................. CS
                 xx...........................................xxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxx................. RF
   Hydrolase  66 rg...........................................ayaigkpewltal.dippdlgaaigsaqsqgrtvall................. 103
                                                               y++g    +++    + +                 l                 
  EPX70673.1 505 LVlthrnrtsitintssyeilqlfpfksetkrmgivvrspegqitFYLKGADSVMQQFiSPSFW-----------------Ldeecgnmareglrtlvv 586
                 2244444555544456666666666655555555555555555554444444444444333334.................255555555555555555 PP

                 ..........................................TTHHHHHHHHHHTHHBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTGGGE CS
                 ..........................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 104 ..........................................qaralavftiadplkvkpeaaeavasLkaagievvlltgdnpetaeraanqlGddyf 160
                                                           + ++l++  ++d+  + ++++ +++ L+ agi v++ltgd  eta+ +a        
  EPX70673.1 587 akkdltneeyntfatvyaeasvsfsgsrdkkmegvvskylenDMDLLGLTGVEDK--LQKDVKVTLELLRNAGIHVWMLTGDKVETARCIAISSR---- 679
                 9999999999999999999**********************999***********..*******************************8776544.... PP

                 SEEEEHHCESSTTT.SHHHHHHHHHHHTSTGGGE CS
                 xxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxx RF
   Hydrolase 161 daviasdietvakp.spegkvaaireLqgkpeev 193
                  ++ +++i+t+ak  s e+ +  +  L gkp  +
  EPX70673.1 680 LVSRGQYIHTIAKLnSREDAQSQLMILAGKPDSC 713
                 2345555666666655555555555555555555 PP

  == domain 3  score: 9.5 bits;  conditional E-value: 0.0005
                 E.SEEEEHHCESSTTTSHHHHHHHHHHHT.STGGGEEEEESSHHHHHHHHHTT CS
                 x.xxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 160 f.daviasdietvakpspegkvaaireLq.gkpeevamVGDgvnDaaalaaAg 210
                 f +a+ + + +++    p +k    r +q  k + v+ +GDg nD+ +++ A+
  EPX70673.1 732 FiEAISNLSCVVICRCTPTQKANMTRLIQkKKSASVCCIGDGGNDVGMIQVAN 784
                 44555555555567778999999999999566888*************99885 PP

>> Cation_ATPase  Cation transport ATPase (P-type)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.7   0.0   6.3e-12   1.4e-08       2      83 ..     470     558 ..     469     561 .. 0.85
   2 ?   -0.3   0.0       0.5   1.1e+03      11      29 ..     655     673 ..     647     699 .. 0.83

  Alignments for each domain:
  == domain 1  score: 34.7 bits;  conditional E-value: 6.3e-12
  Cation_ATPase   2 lcNsaafsensekdevkllGnktEsALlvlaekl........gldteelreetkkvqeipFnssrKrmsvvlklepekkvrlyvKGApei 83 
                    lc++ + se+ + ++     +++E+A+++ ++ +          +++   ++++++q +pF s+ Krm++v++  pe++++ y KGA  +
     EPX70673.1 470 LCHNVTPSETTDGSVSFQAASPDEVAIVRWTSSMglvlthrnRTSITINTSSYEILQLFPFKSETKRMGIVVRS-PEGQITFYLKGADSV 558
                    899999999999999999****************666655544444444555*********************8.9***********765 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.5
  Cation_ATPase  11 nsekdevkllGnktEsALl 29 
                    n+  +++ l+G+k E+A  
     EPX70673.1 655 NAGIHVWMLTGDKVETARC 673
                    677899**********955 PP

>> Hydrolase_3  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   8.9e-07     0.002      82     241 ..     644     803 ..     638     809 .. 0.65

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 8.9e-07
                  HHHHHHHHHHHHTTCEEEEEESSEEEESTT.THHHHHHHHHCHCTCEEEESHHHHHCHCSESEEE.....EES-HHHHHHHHHHHHHHCTTTEEEEEE CS
  Hydrolase_3  82 edvkeiikllkennveillytedkvyvlnkeksekkkkeeektkkkkeeidseeeledeeiakil.....ilkdkekldelekelksklnklltitss 174
                  +dvk  ++ll++ ++++++ t dkv + +  +  ++  ++ ++ ++  + +s e+ +++ ++        ++ d e+++ +  +lk+++ +      s
   EPX70673.1 644 KDVKVTLELLRNAGIHVWMLTGDKVETARCIAISSRLVSRGQYIHTIAKLNSREDAQSQLMILAGkpdscLIIDGESMEFCVGYLKDEFIE----AIS 737
                  6777778888888888888887777777764444444444555555555554444444444333355555667788888888888888854....233 PP

                  STTEEEEEE.TT-SHHHHHHHHHHHCT--GGGEEEEESSGGGHHHHHHSSEEEE.ETTS-HHHHHHSSE CS
  Hydrolase_3 175 skgyleimp.kgvsKgtalkklakelnisleeviafGDgeNDieMLeaaglgvA.mgnaseevkkaAdy 241
                  + +++ i +   ++K++ ++ ++k    +++ v  +GDg ND+ M+++a++gv  +g   +++  aAdy
   EPX70673.1 738 NLSCVVICRcTPTQKANMTRLIQK---KKSASVCCIGDGGNDVGMIQVANIGVGvVGKEGQQASLAADY 803
                  334444444145788888888884...567889*******************95145555666666666 PP

>> DUF4392  Domain of unknown function (DUF4392)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.2   4.7e-05      0.11     175     208 ..     758     792 ..     748     806 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 4.7e-05
     DUF4392 175 aakeig.iptigiGDgGNElGmGkvkeavkkhvpn 208
                 ++++++ +++  iGDgGN++Gm +v++    +v +
  EPX70673.1 758 LIQKKKsASVCCIGDGGNDVGMIQVANIGVGVVGK 792
                 445555588999**********9998766655554 PP

>> FAM219A  Protein family FAM219A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   0.00012      0.27      17      71 ..      26      81 ..      12      90 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00012
     FAM219A 17 lasavesqPkk.trkrsvkfnkgyaalsqepdeklvsldsdsdeelesryssGyss 71
                ++  v s+ ++  r  sv    +  + ++e  ++l+s+  ds++++++++ sG+  
  EPX70673.1 26 IPLKVLSNSRErNRGSSVSLGEARHSYDREEADSLISIHEDSQQDMDANFESGFRM 81
                45444444443256678888999999***************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1035 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       850  (0.0474092); expected 358.6 (0.02)
Passed bias filter:                      515  (0.0287244); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.83u 0.31s 00:00:01.13 Elapsed: 00:00:00.51
# Mc/sec: 6112.47
//
Query:       EPX70674.1  [L=509]
Description: hypothetical protein SOCG_04282 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (509 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1529  (0.0852808); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 3443.31
//
Query:       EPX70675.1  [L=233]
Description: proteasome regulatory particle [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.3e-31  106.4   0.0    1.1e-11   45.2   0.0    3.1  3  Ank_2     Ankyrin repeats (3 copies)
    2.8e-30  104.0   0.1    9.2e-09   35.4   0.0    4.8  5  Ank_5     Ankyrin repeats (many copies)
      3e-29  101.0   0.3    2.6e-10   40.6   0.1    4.7  6  Ank_4     Ankyrin repeats (many copies)
    6.2e-24   81.5   0.0    0.00013   22.1   0.0    5.4  5  Ank_3     Ankyrin repeat
    1.6e-23   82.1   0.0     0.0018   18.6   0.0    5.8  6  Ank       Ankyrin repeat


Domain annotation for each model (and alignments):
>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.2   0.0   1.2e-14   4.4e-11      11      81 ..      16      99 ..       5     102 .. 0.69
   2 !   45.2   0.0   2.9e-15   1.1e-11      12      82 ..      87     169 ..      81     170 .. 0.84
   3 !   20.1   0.0   2.1e-07   0.00074      22      61 ..     166     214 ..     162     226 .. 0.75

  Alignments for each domain:
  == domain 1  score: 43.2 bits;  conditional E-value: 1.2e-14
       Ank_2 11 elvklLl.egadpn.....k.ngktaLhyAakngnleivklLleh....ad...ndgrtpLhyAarsg..hleivklLlekgadinl 81
                e v+  + e    n     + +++t+ h+A++ g+l+i+++Ll++    ad   + g+tpL++A++++     +++ L+e+ +d+n+
  EPX70675.1 16 EYVQRTItED--RNtlntpDaDKRTPFHWACSMGKLDIAEYLLKQvdikADekdEAGWTPLMVAICNKaiPDSFIETLMER-SDVNI 99
                5555555322..22222332578********************9867664454477*********9964446899999976.58776 PP

  == domain 2  score: 45.2 bits;  conditional E-value: 2.9e-15
       Ank_2  12 lvklLlegadpn..k...ngktaLhyAakngnleivklLleh.......adndgrtpLhyAarsghleivklLlekgadinlk 82 
                 +++ L+e +d+n  +    g+t LhyA  +g l+iv+ L+e         d +g+ pLh Aa  g++++vk+Ll +++ +n+ 
  EPX70675.1  87 FIETLMERSDVNieTttrGGQTCLHYASGKGRLNIVQKLCERsprlirtRDLQGQQPLHRAAAVGNSNVVKYLLSQKCPLNAS 169
                 67888888899985257899********************9667787655588*********99**********767777765 PP

  == domain 3  score: 20.1 bits;  conditional E-value: 2.1e-07
       Ank_2  22 pn..k.ngktaLhyAakngnlei.vklLleh.....adndgrtpLhyAa 61 
                 +n  + +g taLh+A  +g+ +i + l+ ++     +d++g+t+L ++ 
  EPX70675.1 166 LNasDsFGFTALHFALAEGHPDIaIDLIKSNadtlrTDKEGHTALDVCM 214
                 45433599**************944555555677767799*****9886 PP

>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   0.0   1.3e-08   4.7e-05       9      54 ..      29      75 ..      24      77 .. 0.78
   2 ?    4.6   0.0     0.012        43      13      43 ..      67      98 ..      63     101 .. 0.68
   3 !   22.8   0.0   2.3e-08   8.2e-05       6      37 ..      96     127 ..      91     132 .. 0.88
   4 !   20.8   0.0     1e-07   0.00036       6      49 ..     130     173 ..     127     173 .. 0.90
   5 !   35.4   0.0   2.6e-12   9.2e-09       8      55 ..     165     212 ..     161     213 .. 0.95

  Alignments for each domain:
  == domain 1  score: 23.6 bits;  conditional E-value: 1.3e-08
       Ank_5  9 vnrldgggntpLhvAakygaadvvrlLl.argadlnltdsrGltald 54
                +n++d ++ tp+h+A++ g +d++++Ll      ++ +d+ G+t+l 
  EPX70675.1 29 LNTPDADKRTPFHWACSMGKLDIAEYLLkQVDIKADEKDEAGWTPLM 75
                466666777*******************5555555667888899985 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.012
       Ank_5 13 dgggntpLhvAak.ygaadvvrlLlargadln 43
                d+ g tpL+vA+  +  +d +++ l++++d n
  EPX70675.1 67 DEAGWTPLMVAICnKAIPDSFIETLMERSDVN 98
                556669*****974444566666666666666 PP

  == domain 3  score: 22.8 bits;  conditional E-value: 2.3e-08
       Ank_5   6 padvnrldgggntpLhvAakygaadvvrlLla 37 
                 ++++ ++ +gg+t+Lh+A+ +g++++v++L++
  EPX70675.1  96 DVNIETTTRGGQTCLHYASGKGRLNIVQKLCE 127
                 689999************************94 PP

  == domain 4  score: 20.8 bits;  conditional E-value: 1e-07
       Ank_5   6 padvnrldgggntpLhvAakygaadvvrlLlargadlnltdsrG 49 
                 p+ + ++d  g+ pLh Aa  g+++vv++Ll   + ln+ ds G
  EPX70675.1 130 PRLIRTRDLQGQQPLHRAAAVGNSNVVKYLLSQKCPLNASDSFG 173
                 77788999***********************9999999999987 PP

  == domain 5  score: 35.4 bits;  conditional E-value: 2.6e-12
       Ank_5   8 dvnrldgggntpLhvAakygaadvvrlLlargadlnltdsrGltaldl 55 
                  +n++d +g+t+Lh+A   g++d+++ L++ +ad+  td++G tald+
  EPX70675.1 165 PLNASDSFGFTALHFALAEGHPDIAIDLIKSNADTLRTDKEGHTALDV 212
                 689********************************************8 PP

>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.0   3.3e-08   0.00012      15      55 .]      16      56 ..       7      56 .. 0.79
   2 !   25.0   0.0   5.9e-09   2.1e-05       2      43 ..      37      78 ..      36      83 .. 0.89
   3 !   17.0   0.0   1.8e-06    0.0066      19      54 ..      90     125 ..      84     125 .. 0.85
   4 !   16.0   0.0   3.7e-06     0.013      30      55 .]     136     160 ..     131     160 .. 0.91
   5 !   40.6   0.1   7.3e-14   2.6e-10       3      55 .]     142     193 ..     140     193 .. 0.96
   6 ?   -0.5   0.0      0.59   2.1e+03      20      40 ..     192     211 ..     191     213 .. 0.81

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 3.3e-08
       Ank_4 15 elvrlLl.ekgadinaqdnrsGetalhiAakrgnveilklLl 55
                e+v++ + e +  +n   +++ +t++h A+++g+++i+++Ll
  EPX70675.1 16 EYVQRTItEDRNTLNTP-DADKRTPFHWACSMGKLDIAEYLL 56
                55555554555557887.***********************8 PP

  == domain 2  score: 25.0 bits;  conditional E-value: 5.9e-09
       Ank_4  2 ltaLhyaaisgrlelvrlLlek.gadinaqdnrsGetalhiAa 43
                +t++h+a+++g+l+++++Ll + ++  ++  ++ G+t+l  A+
  EPX70675.1 37 RTPFHWACSMGKLDIAEYLLKQvDIKADEK-DEAGWTPLMVAI 78
                79******************7767778897.999*****9886 PP

  == domain 3  score: 17.0 bits;  conditional E-value: 1.8e-06
       Ank_4  19 lLlek.gadinaqdnrsGetalhiAakrgnveilklL 54 
                  L e+ +++i  +  r G+t+lh+A  +g+++i++ L
  EPX70675.1  90 TLMERsDVNIETT-TRGGQTCLHYASGKGRLNIVQKL 125
                 5666657889998.9******************9965 PP

  == domain 4  score: 16.0 bits;  conditional E-value: 3.7e-06
       Ank_4  30 qdnrsGetalhiAakrgnveilklLl 55 
                 + + +G+ +lh+Aa  gn +++k+Ll
  EPX70675.1 136 R-DLQGQQPLHRAAAVGNSNVVKYLL 160
                 5.889********************8 PP

  == domain 5  score: 40.6 bits;  conditional E-value: 7.3e-14
       Ank_4   3 taLhyaaisgrlelvrlLlekgadinaqdnrsGetalhiAakrgnveilklLl 55 
                 ++Lh+aa+ g+  +v++Ll+++  +na+ ++ G+talh+A+  g+++i++ L+
  EPX70675.1 142 QPLHRAAAVGNSNVVKYLLSQKCPLNAS-DSFGFTALHFALAEGHPDIAIDLI 193
                 69*************************9.*******************99887 PP

  == domain 6  score: -0.5 bits;  conditional E-value: 0.59
       Ank_4  20 LlekgadinaqdnrsGetalh 40 
                 L+ ++ad  ++ +++G tal+
  EPX70675.1 192 LIKSNADTLRT-DKEGHTALD 211
                 67778888888.*******97 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0   3.7e-08   0.00013       2      29 ..      36      61 ..      35      63 .. 0.88
   2 !    8.6   0.0   0.00093       3.3       2      30 ..      70      98 ..      69     100 .. 0.78
   3 !   12.8   0.0   3.9e-05      0.14       2      23 ..     106     127 ..     105     132 .. 0.92
   4 !   17.8   0.0   8.9e-07    0.0032       2      31 .]     140     168 ..     139     168 .. 0.92
   5 !   13.3   0.0   2.7e-05     0.096       2      28 ..     173     198 ..     172     200 .. 0.89

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 3.7e-08
       Ank_3  2 GetpLhlAarsgnleivkfLlenkgadv 29
                 +tp+h+A++ g+l+i+++Ll+   +d+
  EPX70675.1 36 KRTPFHWACSMGKLDIAEYLLK--QVDI 61
                69*******************9..6665 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00093
       Ank_3  2 GetpLhlAarsgnle..ivkfLlenkgadvn 30
                G+tpL++A+ +  ++   ++ L e    dvn
  EPX70675.1 70 GWTPLMVAICNKAIPdsFIETLME--RSDVN 98
                9********999995468888888..45555 PP

  == domain 3  score: 12.8 bits;  conditional E-value: 3.9e-05
       Ank_3   2 GetpLhlAarsgnleivkfLle 23 
                 G+t Lh+A   g+l+iv+ L+e
  EPX70675.1 106 GQTCLHYASGKGRLNIVQKLCE 127
                 9*******************98 PP

  == domain 4  score: 17.8 bits;  conditional E-value: 8.9e-07
       Ank_3   2 GetpLhlAarsgnleivkfLlenkgadvna 31 
                 G+ pLh+Aa  gn ++vk+Ll    +++na
  EPX70675.1 140 GQQPLHRAAAVGNSNVVKYLLS-QKCPLNA 168
                 889*******************.8999885 PP

  == domain 5  score: 13.3 bits;  conditional E-value: 2.7e-05
       Ank_3   2 GetpLhlAarsgnleivkfLlenkgad 28 
                 G t+Lh+A+  g+++i++ L++  +ad
  EPX70675.1 173 GFTALHFALAEGHPDIAIDLIK-SNAD 198
                 89**************999999.6766 PP

>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   6.8e-06     0.025       2      23 ..      36      57 ..      35      65 .. 0.83
   2 !   11.7   0.0   7.8e-05      0.28       2      30 ..      70     100 ..      69     102 .. 0.75
   3 !   12.0   0.0   6.1e-05      0.22       2      21 ..     106     125 ..     105     136 .. 0.82
   4 !   18.6   0.0   5.1e-07    0.0018       4      31 ..     142     170 ..     139     171 .. 0.84
   5 !   17.1   0.0   1.6e-06    0.0056       2      31 ..     173     203 ..     172     204 .. 0.87
   6 ?   -1.4   0.0       1.1     4e+03       2      10 ..     206     213 ..     205     225 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 6.8e-06
                SBBHHHHHHHHTTHHHHHHHHT CS
         Ank  2 GnTPLHlAatngkkriiklLLh 23
                 +TP H+A++ gk++i+++LL+
  EPX70675.1 36 KRTPFHWACSMGKLDIAEYLLK 57
                58******************93 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 7.8e-05
                 SBBHHHHHHHHTT...HHHHHHHHTTTSTTCB CS
         Ank   2 GnTPLHlAatngk...kriiklLLhGAnlnal 30 
                 G+TPL++A++ +k    + i+ L  ++++n+ 
  EPX70675.1  70 GWTPLMVAIC-NKaipDSFIETLMERSDVNIE 100
                 9********5.544777777878765688875 PP

  == domain 3  score: 12.0 bits;  conditional E-value: 6.1e-05
                 SBBHHHHHHHHTTHHHHHHH CS
         Ank   2 GnTPLHlAatngkkriiklL 21 
                 G T+LH+A+  g ++i++ L
  EPX70675.1 106 GQTCLHYASGKGRLNIVQKL 125
                 99******966668899866 PP

  == domain 4  score: 18.6 bits;  conditional E-value: 5.1e-07
                 BHHHHHHHHTTHHHHHHHH.TTTSTTCBT CS
         Ank   4 TPLHlAatngkkriiklLL.hGAnlnald 31 
                  PLH+Aa  g+ +++k+LL + + lna d
  EPX70675.1 142 QPLHRAAAVGNSNVVKYLLsQKCPLNASD 170
                 5****9999**********6666679988 PP

  == domain 5  score: 17.1 bits;  conditional E-value: 1.6e-06
                 SBBHHHHHHHHTTHHHHHHHH.TTTSTTCBT CS
         Ank   2 GnTPLHlAatngkkriiklLL.hGAnlnald 31 
                 G+T+LH A  +g+++i+ +L+ + A+   +d
  EPX70675.1 173 GFTALHFALAEGHPDIAIDLIkSNADTLRTD 203
                 9******9999**********7779976665 PP

  == domain 6  score: -1.4 bits;  conditional E-value: 1.1
                 SBBHHHHHH CS
         Ank   2 GnTPLHlAa 10 
                 G+T+L + +
  EPX70675.1 206 GHTALDV-C 213
                 99*9977.4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       293  (0.0163422); expected 358.6 (0.02)
Passed bias filter:                      277  (0.0154498); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.48u 0.28s 00:00:00.76 Elapsed: 00:00:00.46
# Mc/sec: 1537.93
//
Query:       EPX70676.1  [L=342]
Description: RNase P subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.2e-21   75.2   0.0    7.1e-21   74.7   0.0    1.1  1  Ribonuc_P_40  Ribonuclease P 40kDa (Rpp40) subunit


Domain annotation for each model (and alignments):
>> Ribonuc_P_40  Ribonuclease P 40kDa (Rpp40) subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.7   0.0     4e-25   7.1e-21       3     238 ..      73     295 ..      71     298 .. 0.83

  Alignments for each domain:
  == domain 1  score: 74.7 bits;  conditional E-value: 4e-25
  Ribonuc_P_40   3 LlekeFiekyikkGsvlalSletridsdnvvallpsGtLtLsldketYerlGLeGkpsrfggrkkqryvveldLrsksfkhgkkgfeRlrwalknvl 99 
                   Ll ++++ +++ +G+ + +S ++  + d+ + + + G+L+  l+k+++ ++GL+++p+++++ ++  +  ++dL+ + +++ +kg+eRl+ al + +
    EPX70676.1  73 LLFPDLYSNLLHSGKAYVIS-QAPYGCDDRISIVN-GKLLVTLTKDSFLQTGLDANPASSKA-TNCLWNASYDLKTTFLQSHRKGYERLKSALGR-F 165
                   78899***************.**************.************************98.999***************************65.5 PP

  Ribonuc_P_40 100 klkfdllfavnpnesskgaedpssklkslkkk.peikecepsiktttlrdvlvPklekdeeeseyseek.eledsalellEwLglvslgsertnadd 194
                   +++ ++++  + +    ++   ++ ++s+    ++ + ++ +   +   +v+vP+      +s ++ +  +  ++  e+lE ++l+ l+++ +++d 
    EPX70676.1 166 NNQWTFYMGISSEYL-DESFM-NTLKNSFPVPlIQHHLHALK---KVYPSVKVPPP----INSLKKIDSmDSLETSVEILEQFSLLLLNADAIQKDY 253
                   688888885555333.33333.44555553333444444444...46889999994....555556666677888899******************* PP

  Ribonuc_P_40 195 aideylssYe.lpeseekvsevtsvswtGlitpeeiselleklrr 238
                   ++d+y++sY+ +++s+   s+++ vs+ Gli ++   ++++ lr+
    EPX70676.1 254 SVDPYICSYKpISNST---SDILAVSIVGLIDASVTIRVYNLLRN 295
                   **********788666...9************9998888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       347  (0.0193541); expected 358.6 (0.02)
Passed bias filter:                      290  (0.0161749); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 2389.37
//
Query:       EPX70677.1  [L=789]
Description: tRNA ligase Trl1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      8e-84  280.9   2.2    1.5e-83  280.0   2.2    1.4  1  RNA_lig_T4_1     RNA ligase
    3.1e-46  157.5   0.0    8.7e-46  156.1   0.0    1.8  1  tRNA_lig_kinase  tRNA ligase kinase domain
    3.2e-46  157.9   0.0    5.4e-46  157.1   0.0    1.3  1  tRNA_lig_CPD     Fungal tRNA ligase phosphodiesterase domain
     0.0091   15.9   0.0      0.043   13.7   0.0    2.1  2  dNK              Deoxynucleoside kinase
  ------ inclusion threshold ------
       0.04   14.5   0.0       0.22   12.1   0.0    2.3  2  AAA_18           AAA domain
        0.1   12.6   0.0         23    5.0   0.1    2.7  2  TBPIP            TBPIP/Hop2 winged helix domain
       0.13   12.5   0.0       0.47   10.7   0.0    1.9  2  AAA_22           AAA domain


Domain annotation for each model (and alignments):
>> RNA_lig_T4_1  RNA ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  280.0   2.2   5.8e-87   1.5e-83       2     219 ..      82     316 ..      81     316 .. 0.97

  Alignments for each domain:
  == domain 1  score: 280.0 bits;  conditional E-value: 5.8e-87
  RNA_lig_T4_1   2 aRGLfteenke...erIvvRgydKFFNinEveetkweeieqktqgpyelteKenGclilisalsdgklvvaSkhsl.....eaeshaevgerllekk 90 
                   aRGLft ++ +   ++I++RgydKFFNi+E + t+w++++++t+gpyelt KenGc+i+isals+g+l+++Skhs+     ++ sha +ger+le +
    EPX70677.1  82 ARGLFTYKDPNseeQKIAIRGYDKFFNIDEIPLTTWKSMKEHTRGPYELTVKENGCIIFISALSNGELIITSKHSFgavegQSVSHALAGERWLETH 178
                   9******99988888******************************************************************99************** PP

  RNA_lig_T4_1  91 lekegkteeeLaeelleknlTavfElcddsfeehivaypeekagLyLhglnentpefstesseevakfakefgfiktklitlesleevkkfleevae 187
                   l+k gk+++eLa+ell++++Tav+Elcdd+feehi++y  e +gLyLhgln n pef t sse+v +fak +gf kt+ ++++++ee+k+flee+a+
    EPX70677.1 179 LQKVGKSKKELAQELLKRQATAVAELCDDEFEEHILPYRAEYRGLYLHGLNLNVPEFTTASSEDVSTFAKVWGFLKTDSFHIQKFEEMKNFLEETAK 275
                   ************************************************************************************************* PP

  RNA_lig_T4_1 188 tgswegeeiEGfVvrcksk...k......dffFklKfkepy 219
                   tg+w+++ +EGfVvrc+s+   k      dffFk+Kf+epy
    EPX70677.1 276 TGKWNNRSVEGFVVRCHSTvqaKehkptnDFFFKYKFDEPY 316
                   ****************8866561567788***********8 PP

>> tRNA_lig_kinase  tRNA ligase kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.1   0.0   3.4e-49   8.7e-46       1     166 [.     401     556 ..     401     558 .. 0.95

  Alignments for each domain:
  == domain 1  score: 156.1 bits;  conditional E-value: 3.4e-49
                      EEEEE--TTSSHHHHHHHHHHH-TTSEEEEGGGS.-TT.-SS-HHHHHHHTTSSTT--EEEEES---SHHHHHHHHHHHHHHHHHH--TT-EEE CS
  tRNA_lig_kinase   1 llvpiatiGCGkttvaltlenlfgeWghvqnDni.tgk.dkkklvkealellkkdeskvvlvDrnnhqkreRkqlfeeidelkeeylsydvnvk 92 
                      llvpiatiGCGkttva++le+lf  W +vqnDni +gk  +k++++++++++ ++++++v+ Drnnh  ++R++l +++++          +v+
       EPX70677.1 401 LLVPIATIGCGKTTVAKILERLFN-WPVVQNDNIpSGKgGPKRFAHAIVNEF-QNGHSIVFSDRNNHIPNMRSALRNDVSSELG-------GVR 485
                      79*********************9.*********9899999***********.9************************998776.......9** PP

                      EEEEE-S-TT-HHHHHHHHHHHHH-------------.-HHHHHHHHHHHHHT-----TT.STTGGG-SEEEE-- CS
  tRNA_lig_kinase  93 vvalsFvdeddleevreltkdRvlkRGdnhqsikvesedekkvkkimegfikrfqpvnke.kepDnkfDlvielk 166
                      ++al F++++   + r ++++R+++RGd+hqsikv++ +++kv++i++ f+k+++p+++e  ++D+ +D+v+el+
       EPX70677.1 486 YIALPFLQNS---NTRSFVQKRIINRGDRHQSIKVSE-GVEKVDAILNMFYKQYRPFDPElFSHDQGYDDVVELD 556
                      ********77...5677********************.**********************88***********98 PP

>> tRNA_lig_CPD  Fungal tRNA ligase phosphodiesterase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.1   0.0   2.1e-49   5.4e-46       1     252 [.     560     785 ..     560     786 .. 0.90

  Alignments for each domain:
  == domain 1  score: 157.1 bits;  conditional E-value: 2.1e-49
  tRNA_lig_CPD   1 sSreNletvvneLhkkyPkLvkevPsaeeldeAieaaleeYkpeikksisksskkkkkkkkkekkekskkkkkkkleYfsvsvptaevnslleslfk 97 
                   +S+eN++ +v+++++++P+Lv++ Ps+ee ++A+e+a++eY p+++k++++ss kkk++                ++Yf+v  p+++vn++l+++++
    EPX70677.1 560 GSLENARLIVDYIREHMPDLVPQNPSEEEYQQALEYAVNEYVPTYTKNMGGSSLKKKENF-------------DGINYFGVCFPSEKVNNVLKEIIS 643
                   59************************************************9988877744.............56********************** PP

  tRNA_lig_CPD  98 eksaseekarlykqlkqsrriqpefHvTLiHraskk...eekelWekytklykealaeakskkskesaelgevkvrlerlvwddrimaivvrlleee 191
                   +k         +++++ s  +q++fHvT+iH+++ +   e  +lW++y+++++++++            +++v++++++lvwd rim++ v++ +++
    EPX70677.1 644 SKG------ISWNDMFASYTLQESFHVTMIHNSQIAfgpETANLWQQYLNQLENKHDG-----------NNQVNFTIRNLVWDGRIMCFAVDIDSKS 723
                   444......45777778888***********88777788*************999933...........3579********************9655 PP

  tRNA_lig_CPD 192 eel..ecankvpHiTvgtaseevkpkeSNdLlkrwleegsgeetgikeleiegkkvlegsVki 252
                     +  +++n+  HiT+gt s++vk++ SN +l+r    ++++e +i++l++e k+ + g+++ 
    EPX70677.1 724 -VWcgKTVNPQLHITLGTTSPSVKAYDSNLMLERLRAGKASDEPKIHVLDVEPKVNIMGTLQS 785
                   .66569****************************7777778999************9999875 PP

>> dNK  Deoxynucleoside kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.0   1.7e-05     0.043       6      29 ..     407     430 ..     406     469 .. 0.86
   2 ?   -2.8   0.0       1.8   4.6e+03     152     164 ..     682     694 ..     677     711 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.7e-05
                 STTSSHHHHHHHHHCCSTCEEEE- CS
         dNK   6 nIgaGKstlvklLskklgvkvfeE 29 
                 +Ig+GK+t++k+L++ ++++v+++
  EPX70677.1 407 TIGCGKTTVAKILERLFNWPVVQN 430
                 69******************9986 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.8
                 -HHHHHHHHHHHH CS
         dNK 152 eldYlekLhekye 164
                  ++Yl++L++k+ 
  EPX70677.1 682 WQQYLNQLENKHD 694
                 578******9997 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       4.8   1.2e+04      10      22 ..     183     197 ..     160     221 .. 0.64
   2 ?   12.1   0.0   8.4e-05      0.22       6      32 ..     407     433 ..     405     488 .. 0.67

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 4.8
      AAA_18  10 GKt..tlakeLskrl 22 
                 GK+  +la+eL kr 
  EPX70677.1 183 GKSkkELAQELLKRQ 197
                 444224566665553 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 8.4e-05
      AAA_18   6 tpGvGKttlakeLskrlgfgvnlrdva 32 
                 t+G+GKtt+ak L+++ +  v+ +d++
  EPX70677.1 407 TIGCGKTTVAKILERLFNWPVVQNDNI 433
                 89***********88865533333333 PP

>> TBPIP  TBPIP/Hop2 winged helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.013        34      30      43 ..     410     423 ..     405     428 .. 0.89
   2 ?    5.0   0.1     0.009        23       2      17 ..     523     538 ..     522     541 .. 0.88

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.013
       TBPIP  30 lgKtavqkaLdeLv 43 
                  gKt+v k+L+ L 
  EPX70677.1 410 CGKTTVAKILERLF 423
                 69*********995 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.009
       TBPIP   2 aeelvleylqeqnrPf 17 
                   +++l++ ++q+rPf
  EPX70677.1 523 KVDAILNMFYKQYRPF 538
                 5689***********9 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00018      0.47      11      71 ..     405     462 ..     396     487 .. 0.76
   2 ?   -3.7   0.0       5.2   1.3e+04      54      70 ..     679     695 ..     673     706 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00018
      AAA_22  11 tGesGtGKTtllrrlleqldeeakaeeerpevv.fvtlpsst.sskdllrellralglelka....e 71 
                 ++  G+GKTt+++ l + +         + +vv   ++ps++ ++k ++++++++++++++     +
  EPX70677.1 405 IATIGCGKTTVAKILERLF---------NWPVVqNDNIPSGKgGPKRFAHAIVNEFQNGHSIvfsdR 462
                 6788***************.........889997556666667**************8776566553 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 5.2
      AAA_22  54 kdllrellralglelka 70 
                 ++l+++ l++l++++++
  EPX70677.1 679 ANLWQQYLNQLENKHDG 695
                 67888888888887777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (789 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       734  (0.0409393); expected 358.6 (0.02)
Passed bias filter:                      556  (0.0310112); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.69u 0.27s 00:00:00.96 Elapsed: 00:00:00.44
# Mc/sec: 5406.00
//
Query:       EPX70678.1  [L=330]
Description: uridine ribohydrolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.4e-84  284.2   2.4    1.7e-84  284.0   2.4    1.0  1  IU_nuc_hydro  Inosine-uridine preferring nucleoside hydrolase


Domain annotation for each model (and alignments):
>> IU_nuc_hydro  Inosine-uridine preferring nucleoside hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  284.0   2.4   9.3e-89   1.7e-84       3     305 .]      19     318 ..      14     318 .. 0.92

  Alignments for each domain:
  == domain 1  score: 284.0 bits;  conditional E-value: 9.3e-89
                   EEEEE--SHHHHHHHHHHHCTHTTEEEEEEEE-SSSS-HHHHHHHHHHHHHHHCTTT.S-EEEE-SS-SSSS.S-SHHHHTTTSS.TSS-.--SSHC CS
  IU_nuc_hydro   3 vilDtDpGiDDalAlllalaespeiellgittvaGnvsleqatrnalrvlealggrddipvyaGaekpllre.kaaaeihGedGl.gdvllpeperk 97 
                   v++D+DpG+DD++Al++a+++ +++++lg++tv+Gn+++++at+nal+v+ +l++++ + v+ Ga+kpl+r+ k a++ihG +Gl g +llp++ +k
    EPX70678.1  19 VWIDCDPGHDDVVALMIAASA-DHCNILGLSTVHGNTTVQNATHNALSVM-ELLKKN-VDVHSGAAKPLMRPsKLATHIHGVNGLaGISLLPDQPKK 112
                   9*****************996.889*************************.888566.**************999999*******555588988888 PP

                   SCSSHHHHHHHHHHHHCHHTTTTEEEEECS-SHHHHHHHHHTCCHHHHEEEEEEE---SSS--SSSSSS-HHHHHSHHHHHHHHHTS-E....EEEE CS
  IU_nuc_hydro  98 aesesavdalidaveaareypgevtlvatGplTNiAlalrldpelakkvkrlviMGGaftarGNvtpvaEfNifvDPeAAkiVlesapv...kitlv 191
                   ++  +av  +++a+   +++p  +tlvatGplTN+Al+++++p+++++++rlv+MGG+ +  GN+t  aEfN+f+DPeAAk Vle  p+   k++++
    EPX70678.1 113 QAVPDAVTGMHQAI---SQNPVPITLVATGPLTNVALLVATYPKVTENIERLVFMGGSTG-IGNITSQAEFNMFADPEAAKLVLET-PSlagKLYMI 204
                   88889**999****...888878**********************************976.***********************85.445789**** PP

                   -HHHHTTSCHEECHHHHHHHHCSTCBHHHHHHHHHHHHHHHHHHHHH.SSEEE-HHHHHHHHHH-GGGEEEEEEEEEEESSSSTTTTEEEEETSTT. CS
  IU_nuc_hydro 192 pldvthkvqalltseeveelaalekglgafladllefyikaykeaeg.sdgaplhDplavavaldpelvttkrlavdveleggltrGrtvvdlrrl. 286
                   pldvth  ++l++s+ +++l++ ++++++++ +l++ ++++y+++ g ++g+p+hD++a+++al pel+  + ++++v l ++lt Grtv+d +++ 
    EPX70678.1 205 PLDVTH--SVLMDSSIITKLQQRGSPVTKTILELMTVFQATYETVYGfKNGVPVHDACAIVYALWPELMASRLMYATVSL-DHLTLGRTVCDVWSQq 298
                   ******..878999999998887666777999*************************************99999999977.57*************9 PP

                   .TTS--EEEEEEE-HHHHHH CS
  IU_nuc_hydro 287 .kkaknvkvatevdverfle 305
                    +  +nv+v+ + dv++f++
    EPX70678.1 299 tQYFPNVHVVLSADVAAFWK 318
                   9999***************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       496  (0.0276647); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.44
# Mc/sec: 2240.05
//
Query:       EPX70679.1  [L=228]
Description: DNA polymerase epsilon subunit Dpb3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.4e-14   53.4   1.9    2.4e-14   53.4   1.9    1.9  2  CBFD_NFYB_HMF   Histone-like transcription factor (CBF/NF-Y) 
      1e-05   25.9   0.9      1e-05   25.9   0.9    3.1  3  Histone         Core histone H2A/H2B/H3/H4
  ------ inclusion threshold ------
        0.8    8.0   3.1       0.94    7.8   3.1    1.1  1  SID-1_RNA_chan  dsRNA-gated channel SID-1
        2.1    8.1  21.4       0.37   10.6  17.7    1.7  2  Pox_Ag35        Pox virus Ag35 surface protein
        4.4    6.1  30.6       0.24   10.3  22.1    2.1  2  DUF5427         Family of unknown function (DUF5427)
        7.3    4.4   7.8        8.8    4.1   7.8    1.3  1  V_ATPase_I      V-type ATPase 116kDa subunit family


Domain annotation for each model (and alignments):
>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.4   1.9     8e-18   2.4e-14       2      65 .]      43     106 ..      42     106 .. 0.98
   2 ?   -3.2   0.3       3.7   1.1e+04      41      51 ..     164     174 ..     157     176 .. 0.68

  Alignments for each domain:
  == domain 1  score: 53.4 bits;  conditional E-value: 8e-18
                    XXXHHHHHHHHHCCTTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHHH CS
  CBFD_NFYB_HMF   2 eLPiarvkkImksdpdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehiklAv 65 
                    ++P+ar+kkIm+ d+d++k+a+  ++++++++e+f +++ +e+++ +   ++K ++  h+k+Av
     EPX70679.1  43 RFPVARIKKIMQADQDVGKVAQVTPVIMSKALEMFMQSIINESCQQARLHQAKRVTVSHLKHAV 106
                    69*************************************************************8 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 3.7
                    HHHHHHHHCCT CS
  CBFD_NFYB_HMF  41 aseAaeickke 51 
                    +++Aae +k+e
     EPX70679.1 164 SKKAAESVKEE 174
                    45667666665 PP

>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9   0.9   3.5e-09     1e-05      63     120 ..      42     100 ..       3     107 .. 0.88
   2 ?   -4.7  15.1         6   1.8e+04       5      56 ..     133     179 ..     126     194 .. 0.42
   3 ?   -0.1   3.4      0.38   1.1e+03      12      56 ..     175     221 ..     169     227 .. 0.49

  Alignments for each domain:
  == domain 1  score: 25.9 bits;  conditional E-value: 3.5e-09
                 XHHHHHHHHHHHH.TTSSSXEEXHHHHHHHHHHHHHHHHHHHHHHHHHHH..HTTXSEEX CS
     Histone  63 qklpfaRvvreivksekedlrisaeavlalqealEallvelfeeAnllak..haKRvTit 120
                  ++p+aR +++i++ +++  ++ + +++++ +alE ++ ++  e++  a+  +aKRvT+ 
  EPX70679.1  42 SRFPVAR-IKKIMQADQDVGKVAQVTPVIMSKALEMFMQSIINESCQQARlhQAKRVTVS 100
                 479****.****************************************975479999975 PP

  == domain 2  score: -4.7 bits;  conditional E-value: 6
                 SXEEEXXXXEEXXXXXXXXXXHT.TS-SSSSB--TTT-XTTHHHHHHHHHHHH CS
     Histone   5 kekarkesektapekkvsakker.kasskskkkkkrryrpgtvalkeirkyqk 56 
                 k k+++++++ + +++      +    + skk+k++ +++  +  ke+++ q+
  EPX70679.1 133 KPKRPRTRRTPQNPEN------TeNTRQASKKSKTKESKKAAESVKEEEEEQE 179
                 2222222222222222......1333333333333344444444444333333 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.38
                 XXEEXXXXXXXXXXHT..TS-SSSSB--TTT-XTTHHHHHHHHHHHH CS
     Histone  12 sektapekkvsakker..kasskskkkkkrryrpgtvalkeirkyqk 56 
                  e+++pe++ ++++e+  ++s+  ++++k+ +     a  e+ +++ 
  EPX70679.1 175 EEEQEPEPEQEQEPEEatVESEGVSETVKKEESAEADAASEKTASEN 221
                 33344444445555555555555555555555555555555554444 PP

>> SID-1_RNA_chan  dsRNA-gated channel SID-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   3.1   0.00031      0.94     109     203 ..      48     194 ..      21     224 .. 0.68

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.00031
  SID-1_RNA_chan 109 evkklikksvyvvavllvllvllsfllltllvvivekvre....................................................... 148
                     ++kk++++++ v  v+ v+ v++s +l ++++ i++++++                                                       
      EPX70679.1  48 RIKKIMQADQDVGKVAQVTPVIMSKALEMFMQSIINESCQqarlhqakrvtvshlkhavksveqfdflqdivekipdappikaerkpkrprtrrt 142
                     5777777777888888888889999999999999988777899999999999999999999999999**************99999998877544 PP

  SID-1_RNA_chan 149 ..sseekrvkessssesaseslesvssavrsesessveeesdydtleeiesdknvir 203
                       +      ++++++++as+++++ +s+   es ++ eee++++  +e e ++  + 
      EPX70679.1 143 pqN-----PENTENTRQASKKSKTKESKKAAESVKEEEEEQEPEPEQEQEPEEATVE 194
                     320.....2233333333333333333333444444445555555555544433333 PP

>> Pox_Ag35  Pox virus Ag35 surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1       1.3   3.8e+03     103     115 ..      18      30 ..       4      64 .. 0.51
   2 ?   10.6  17.7   0.00012      0.37      48     130 ..     128     217 ..      80     225 .. 0.51

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1.3
    Pox_Ag35 103 esvqaeeeksnes 115
                  +  +e+ +s+ s
  EPX70679.1  18 SNAAEESPTSAAS 30 
                 2222222222222 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00012
    Pox_Ag35  48 spkqekkkrattprkk......pakkekkkkeeekeeaaeeeeledseedeenendedeseesvqaeeeksnes.teddadeldeSdLkv 130
                  + + k kr+ t+r +        +++  kk++ ke+++ +e ++++ee++e e ++++ +e+ ++e+e + e+ ++++ +e d    k 
  EPX70679.1 128 IKAERKPKRPRTRRTPqnpentENTRQASKKSKTKESKKAAESVKEEEEEQEPEPEQEQEPEEATVESEGVSETvKKEESAEADAASEKT 217
                 333333344333332222232233333333333333333444455555555555555555555555555555554555555555544444 PP

>> DUF5427  Family of unknown function (DUF5427)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   1.3     0.049   1.5e+02     105     154 ..       6      55 ..       1      68 [. 0.56
   2 ?   10.3  22.1   8.1e-05      0.24      18     119 ..      92     203 ..      75     226 .. 0.42

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.049
     DUF5427 105 pseeeseeqeaekkeeeeeeaeeeeadpiasgsgWWgsilatasaavkqa 154
                 p++ee+++ +  ++++ee+++++++++++a+  +W + +  +   ++ qa
  EPX70679.1   6 PAHEEETKPSVPSNAAEESPTSAASTAAAAAAASWKSRFPVARIKKIMQA 55 
                 44444444444444566667777778888888899888333333334444 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 8.1e-05
     DUF5427  18 kkkktkkkkkakkkdee.diLaeLeeLakkesrpaTPrvksnkskkaspkkkksaeepakeekkkeeessedk..rksvestrsleasetpseeeseeq 113
                 +++k  + ++ k++ ++ + +++L+++ +  + p+ P +k +++ k+  ++++ ++++++e++++++++s++k  +k++es ++ e++++p+ e++  q
  EPX70679.1  92 HQAKRVTVSHLKHAVKSvEQFDFLQDIVE--KIPDAPPIKAERKPKRPRTRRTPQNPENTENTRQASKKSKTKesKKAAESVKEEEEEQEPEPEQE--Q 186
                 23333333333333333489999999988..57888989888444443333333333333333322222222223344444444444333333322..2 PP

     DUF5427 114 eaekk...........e 119
                 e+e++           +
  EPX70679.1 187 EPEEAtvesegvsetvK 203
                 22222223333322211 PP

>> V_ATPase_I  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   7.8     0.003       8.8     582     701 ..      67     191 ..      46     227 .. 0.45

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.003
  V_ATPase_I 582 psllntlinmflskgkv..keeelyegqetvqvvLlllalvcvpvlllvkPlilklkhkkkkkkkekkkeeee....eeeeeeeeeeeeeeeeaeeeee 674
                 p ++   ++mf+++  +  +++   ++ + v v  l  a+ +v  + +++ ++ k+  +   k+++k k+ ++    + + e++e++++ +++++++e+
  EPX70679.1  67 PVIMSKALEMFMQSIINesCQQARLHQAKRVTVSHLKHAVKSVEQFDFLQDIVEKIPDAPPIKAERKPKRPRTrrtpQ-NPENTENTRQASKKSKTKES 164
                 555555555555554443322223333344455555555566666666666665555554444443333333322220.11111111111111122222 PP

  V_ATPase_I 675 eeeeeeeeeeeeeeeeeeeeefdfgev 701
                 ++++e+ +eeeee+e e e+e++ +e 
  EPX70679.1 165 KKAAESVKEEEEEQEPEPEQEQEPEEA 191
                 222222222222222222223333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2685  (0.149757); expected 358.6 (0.02)
Passed bias filter:                      706  (0.0393775); expected 358.6 (0.02)
Passed Vit filter:                       167  (0.00931452); expected 17.9 (0.001)
Passed Fwd filter:                        44  (0.00245412); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.84u 0.37s 00:00:01.21 Elapsed: 00:00:00.47
# Mc/sec: 1447.94
//
Query:       EPX70680.1  [L=73]
Description: hypothetical protein SOCG_04276 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.2e-06   26.9   0.0    5.3e-06   26.6   0.0    1.1  1  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a
  ------ inclusion threshold ------
      0.025   14.6   0.1      0.036   14.1   0.1    1.2  1  DUF3895        Protein of unknown function (DUF3895)
      0.033   14.4   0.0      0.037   14.2   0.0    1.1  1  CENP-W         CENP-W protein


Domain annotation for each model (and alignments):
>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.0   8.9e-10   5.3e-06       3      62 ..       3      61 ..       1      63 [. 0.91

  Alignments for each domain:
  == domain 1  score: 26.6 bits;  conditional E-value: 8.9e-10
                   XXHHHHHHHHHCCTTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHH CS
  CBFD_NFYB_HMF  3 LPiarvkkImksdpdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehik 62
                    P+ r+k+++++  +   i ++A +li+    +f++ l++eA+ ++++++ K i++ hi+
     EPX70680.1  3 YPKPRMKRMLRQHAGRP-IDDSAVDLIYLDYCLFLQTLLKEANIEAERTGEKKIQPIHIQ 61
                   5999*********4444.*****************************************8 PP

>> DUF3895  Protein of unknown function (DUF3895)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.1   5.9e-06     0.036      45      71 ..      28      54 ..      24      56 .. 0.94

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 5.9e-06
     DUF3895 45 iYgdvCvvLdqlakegvielvkkdgkr 71
                iY d C++L+ l ke  ie  ++++k+
  EPX70680.1 28 IYLDYCLFLQTLLKEANIEAERTGEKK 54
                8***********************986 PP

>> CENP-W  CENP-W protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   6.3e-06     0.037      18      88 .]       4      73 .]       2      73 .] 0.82

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 6.3e-06
      CENP-W 18 prgflkrvlkrrkphlrleascdllvhlncllfirrlaeesrtnacenksgvikkdhvlaaakvilkksrg 88
                p+  +kr+l+++      +++ d l++l+  lf++ l +e+  +a ++  + i+  h+    + il + rg
  EPX70680.1  4 PKPRMKRMLRQHAGRPIDDSAVD-LIYLDYCLFLQTLLKEANIEAERTGEKKIQPIHIQNVKRKILARYRG 73
                56667888887766654444555.7899999***************9999999999999999999998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       426  (0.0237604); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.37u 0.27s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 532.25
//
Query:       EPX70681.1  [L=152]
Description: ARP2/3 actin-organizing complex subunit Arc5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.3e-38  132.0   0.0    2.6e-38  131.9   0.0    1.0  1  P16-Arc      ARP2/3 complex 16 kDa subunit (p16-Arc)
  ------ inclusion threshold ------
       0.14   12.3   0.0       0.17   11.9   0.0    1.2  1  Symplekin_C  Symplekin tight junction protein C terminal


Domain annotation for each model (and alignments):
>> P16-Arc  ARP2/3 complex 16 kDa subunit (p16-Arc)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.9   0.0   2.9e-42   2.6e-38       1     145 [.       2     149 ..       2     152 .] 0.95

  Alignments for each domain:
  == domain 1  score: 131.9 bits;  conditional E-value: 2.9e-42
                 XXXXXXXXXXXXXXXXXXXXXX...XXXXX---GGGGTHHHHHHHHHHS--HHHHHHHTSS---S-S-HHHHHHHHHHHHHHHHTS-GGGHHHHHHHS- CS
     P16-Arc   1 afRkidvDaldedkfkeeelap...espeeseaevqqkesevrsllrsgdaeeALkaalknppygakeqaakeralqlvlevLssikasdiekavksld 96 
                 +fR  dvDa++e  +++++l +   es+e+ +a+++q   ++rs++++g+a+e L+ +l+  pyg++ q+a++++l++++++Ls i+++di  ++k+ +
  EPX70681.1   2 SFRMQDVDAVTEPVLTQQDLFTprpESSEQVQAAISQLVPQARSTIQAGNATEGLRLLLSYVPYGDDVQEARQQYLSAFVDLLSYIRSTDIVGFLKQCS 100
                 59************9999998866666778888999999999********************************************************* PP

                 HHHHHHHHHHHHHHTT-------SHHHHHHHHHHHTT-SHHHHHHTT-- CS
     P16-Arc  97 keeldvLmkYiYkgmespsekssavLLsWhekvvevaGvgsIvrvltdr 145
                 +e  d +m++iY+++++p+  +s+vLL+Whek+v+v G+g+I+rvl++r
  EPX70681.1 101 TEDSDNIMNFIYRALANPQAYNSSVLLNWHEKIVQVNGIGCITRVLNSR 149
                 **********************************************987 PP

>> Symplekin_C  Symplekin tight junction protein C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   1.9e-05      0.17      15     110 ..      30     137 ..      16     145 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 1.9e-05
  Symplekin_C  15 eevislLpklikl.....nekvvkevfrrllaass.ekseeekekspltp.aellvalhnle.....kkkkevelkslvealdlclsekevftqevla 100
                  e+v +++ +l+ +     +    +e +r ll+  +   + +e+++++l++ ++ll ++ + +     k+ +  + +++++ +  +l++++ +++ vl 
   EPX70681.1  30 EQVQAAISQLVPQarstiQAGNATEGLRLLLSYVPyGDDVQEARQQYLSAfVDLLSYIRSTDivgflKQCSTEDSDNIMNFIYRALANPQAYNSSVLL 127
                  6666666666666554443444444444444433367788899999****9****************777888999********************** PP

  Symplekin_C 101 aalqqlveee 110
                  +  +++v+ +
   EPX70681.1 128 NWHEKIVQVN 137
                  **99999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       552  (0.0307881); expected 358.6 (0.02)
Passed bias filter:                      500  (0.0278878); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.45
# Mc/sec: 1020.81
//
Query:       EPX70682.1  [L=205]
Description: mediator complex subunit Med20 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.7e-18   65.7   0.1    5.2e-18   65.2   0.1    1.3  1  Med20     TATA-binding related factor (TRF) of subunit 20 of 


Domain annotation for each model (and alignments):
>> Med20  TATA-binding related factor (TRF) of subunit 20 of Mediator complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.2   0.1   2.9e-22   5.2e-18      33     192 ..      30     155 ..       1     173 [. 0.90

  Alignments for each domain:
  == domain 1  score: 65.2 bits;  conditional E-value: 2.9e-22
                 -EEEEEEEEESSCCSECTTC..........BSEEEEEECTTTTSEEEEESSSE...................EEEE-HSHHHHHHHCT.-SEEE-EEEE CS
       Med20  33 gatkvgrwalehklyrdtpsclpasqrpaqpkylqfLslserpnsgfiiisqqpektgtnsqqsplvmttvsllsadslfqilleklqslWcqrqtvkv 131
                 +a+ + +w +++klyr+ +           pk l +L+++ +p ++ ++ +++                   ++ a+s  + ++ +++ lW+ rqt+ +
  EPX70682.1  30 LAQYMKKWIVQYKLYRNVLF----------PKSLELLKQNIHPYMYACVDETT-------------------TVDAESTLEDIILRTK-LWTFRQTFNI 98 
                 788999**********9988..........7****************999977...................7899999999999999.********** PP

                 EEEE.BEESSEEEEEEEEECSSS---EEEEEEE-S...SS-CCCCHHHHHHCSCTTT-TSC CS
       Med20 132 egggvYelgdfrvRvgdvfqtqrvrGllvEieyrgadpdaeyeaaaalireflsklgiega 192
                 eg   Ye+gdf+v v++v q+++++G+++++ y+g   + +++ a+ +++ef+  + +++a
  EPX70682.1  99 EGAI-YEVGDFTVAVANVLQKSTWKGIVFHVTYDG---SDDVDIARPILQEFFDICFFKNA 155
                 *999.****************************66...999*************9988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       482  (0.0268838); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1473.87
//
Query:       EPX70683.1  [L=599]
Description: dihydroxy-acid dehydratase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   5.1e-213  708.4   0.2   5.9e-213  708.2   0.2    1.0  1  ILVD_EDD  Dehydratase family


Domain annotation for each model (and alignments):
>> ILVD_EDD  Dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  708.2   0.2  3.3e-217  5.9e-213       2     517 .]      71     593 ..      70     593 .. 0.98

  Alignments for each domain:
  == domain 1  score: 708.2 bits;  conditional E-value: 3.3e-217
    ILVD_EDD   2 piigiansyselvpchvhlkelaeavkegveeaggvpaefntigvsDgiamgeegmrysLpsReliadsvetmleaqllDalvlisgCDKivPgllmaa 100
                 p++gia+++ e +pc++hl +l+++vk+gv++ag ++++fntig+sDgi+mg++gmrysL+sRe+iads+e ++++q++Da+v i+gCDK++Pg+l+a+
  EPX70683.1  71 PQVGIASCWYEGNPCNMHLLDLGRRVKKGVQRAGLTGFQFNTIGISDGISMGTSGMRYSLQSREIIADSIESVMQGQWYDANVSIPGCDKNMPGCLIAM 169
                 9************************************************************************************************** PP

    ILVD_EDD 101 arlniPaifvsgGpmeagkkk.....kldlssvfeavgalaagkiseeeleeleeaacpgaGsCsgmgTAntmaclaealGlslpgsasipatsaerke 194
                  r+n+P+i+v+gG++++g+++      +dl+s+f+++g++ +g+i+ee+ +++ ++acpg G+C+gm+TAnt a++ae++G++lpgs+s+pa ++e+ +
  EPX70683.1 170 GRVNRPSIMVYGGTILPGHSScmnnaPIDLVSAFQSYGQYITGQINEETRHDIIRHACPGGGACGGMYTANTIASCAEVIGMTLPGSSSFPAGTPEKFA 268
                 *****************88555677899*********************************************************************** PP

    ILVD_EDD 195 laeeagkrivelvekdlkprdiltkeafeNAivvllalGGStNavlHllAiAreagveltlddfdelsrkvpllaklkPsgkydmedlhraGGvpavlk 293
                 ++ ++g +i +l+ +d++p+di+t++afeNA+++++alGGStN vlHl+AiA+++g++ltlddf+++s+++p++a++kPsgky m dl ++GG+pavlk
  EPX70683.1 269 ECDAVGDAIKRLLVEDIRPSDIMTRKAFENAMILTMALGGSTNVVLHLVAIAKSVGITLTLDDFQAVSNRTPCIADMKPSGKYVMADLFKIGGIPAVLK 367
                 *************99************************************************************************************ PP

    ILVD_EDD 294 eLlkagllhgdvltvtgktlaenleeaev..keqdvirplekplskegglavLkGnLapeGavvKtsaveeellkfegpArvfdseeeaveailkgkik 390
                 +L+++gl++g+++tvtgktlaenl+ea+   + q++i+p+++pl++eg+l++L+G+LapeG+v+K++++e   l+f+g+Arvfd e ++++a+++g+ k
  EPX70683.1 368 YLHAEGLIDGSTMTVTGKTLAENLREAKPlkEGQQIIKPISAPLKTEGHLRILRGSLAPEGSVAKITGKE--GLEFRGKARVFDAEADFISALERGEFK 464
                 ***99*******************996655699************************************9..9********************99**** PP

    ILVD_EDD 391 agd..vvviryeGPkGgpGmpEmlkptsallgkglgkkvalitDGRfSGaskglvighvsPEAaegGpialvedGDiieidiekrtlelevseeelaaR 487
                 +g+  vvvir+eGPkGgpGmpEmlkp+sa++g+glgk+val+tDGRfSG+s+g++ighv PEA++gGpialv+dGDiiei++ k+tl+l+v+e+e+a R
  EPX70683.1 465 KGEktVVVIRFEGPKGGPGMPEMLKPSSAIMGAGLGKDVALLTDGRFSGGSHGFLIGHVDPEAQAGGPIALVKDGDIIEINAIKNTLDLLVDEQEMACR 563
                 **999********************************************************************************************** PP

    ILVD_EDD 488 raawkpekkvktrgllakyaklvssaseGA 517
                 r+aw++ + ++++g+l ky ++vs+as+GA
  EPX70683.1 564 RQAWRAPPFKYQQGTLLKYCRNVSTASKGA 593
                 *****9444455*****************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (599 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       324  (0.0180713); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.31s 00:00:00.86 Elapsed: 00:00:00.47
# Mc/sec: 3862.30
//
Query:       EPX70684.1  [L=215]
Description: YEATS family histone acetyltransferase subunit Yaf9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-32  111.1   0.7      4e-32  110.0   0.7    1.6  1  YEATS     YEATS family


Domain annotation for each model (and alignments):
>> YEATS  YEATS family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.0   0.7   2.2e-36     4e-32       1      80 [.      38     118 ..      38     119 .. 0.98

  Alignments for each domain:
  == domain 1  score: 110.0 bits;  conditional E-value: 2.2e-36
       YEATS   1 thkWtvavrsaasddlsefikkVqFkLhetyanptrvvekpPFevtetGwGeFeiqikiffkpea.ekpltlehdLklhpe 80 
                 th W+++v++++ +d+s+++kkV+FkLh+ty+n tr++e+ PFev etGwGeF+i i+iff pe+ ek+lt++h Lklhp+
  EPX70684.1  38 THTWRIFVEGVDGEDISKWVKKVVFKLHDTYNNSTRSIESLPFEVIETGWGEFDIMIRIFFMPEThEKSLTFYHRLKLHPS 118
                 8**********99***************************************************99*************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       830  (0.0462937); expected 358.6 (0.02)
Passed bias filter:                      599  (0.0334096); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 1512.87
//
Query:       EPX70685.1  [L=288]
Description: hypothetical protein SOCG_04271 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.4e-39  132.1  19.2    1.7e-20   73.1   4.5    2.4  2  UPF0016          Uncharacterized protein family UPF0016
    2.8e-05   23.9   0.1    2.8e-05   23.9   0.1    2.8  3  Mntp             Putative manganese efflux pump
  ------ inclusion threshold ------
      0.034   13.8   3.7       0.14   11.8   2.4    2.5  2  TerC             Integral membrane protein TerC family
      0.069   12.7   0.2      0.069   12.7   0.2    2.3  3  Nitrate_red_gam  Nitrate reductase gamma subunit


Domain annotation for each model (and alignments):
>> UPF0016  Uncharacterized protein family UPF0016
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.7   6.9   1.5e-21   6.9e-18       3      75 .]      54     126 ..      52     126 .. 0.96
   2 !   73.1   4.5   3.7e-24   1.7e-20       2      75 .]     206     279 ..     205     279 .. 0.98

  Alignments for each domain:
  == domain 1  score: 64.7 bits;  conditional E-value: 1.5e-21
     UPF0016   3 aflliflaElGDkTqlaaalLaarykplpVflGavlAlalmtvlsvllGsslakrlperlielvaavlFllfG 75 
                 a+++if  ElGDkT+++aalL+ +++   VflG++ Al++mt+l+vllG++   ++p+++++l++++lF++fG
  EPX70685.1  54 AISMIFGCELGDKTFIVAALLSFENSRGMVFLGSFSALFCMTLLGVLLGHAAPMLFPKQFTDLLGGLLFVIFG 126
                 789**********************8888********************999889*****************9 PP

  == domain 2  score: 73.1 bits;  conditional E-value: 3.7e-24
     UPF0016   2 aaflliflaElGDkTqlaaalLaarykplpVflGavlAlalmtvlsvllGsslakrlperlielvaavlFllfG 75 
                 +af+l+f++E+GD++q+a++++aa  ++++VflGa l++ ++t+l+vl G++la++++++ + l +++lF++fG
  EPX70685.1 206 KAFVLTFVSEWGDRSQIATIAMAASDNMFGVFLGASLGHGFCTGLAVLSGKYLATKIQMHKVLLSGGCLFIVFG 279
                 79***********************************************************************9 PP

>> Mntp  Putative manganese efflux pump
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.61   2.7e+03      41      63 ..       3      25 ..       1      58 [. 0.50
   2 !   23.9   0.1   6.4e-09   2.8e-05      13      72 ..      84     146 ..      77     157 .. 0.81
   3 ?    1.2   1.4     0.064   2.9e+02     116     149 ..     246     280 ..     221     283 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.61
        Mntp 41 hwiafllLlllGlkmivealkee 63
                 +++ llL+++ +  + e++ ++
  EPX70685.1  3 RYLGLLLLATMSVAAMAESTPSN 25
                56677777777777666666333 PP

  == domain 2  score: 23.9 bits;  conditional E-value: 6.4e-09
        Mntp  13 ifGlfqa..lmpliGwllGkllselie.avdhwiafllLlllGlkmivealkeeeeekkekee 72 
                 ++G f a  +m+l+G+llG+++  l   +++  +++ll+++ G+kmi+e+++  +++++ +ee
  EPX70685.1  84 FLGSFSAlfCMTLLGVLLGHAAPMLFPkQFTDLLGGLLFVIFGVKMIREGIEAMNAHESIDEE 146
                 56666652269***********9976449**********************998888776554 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.064
        Mntp 116 vlsllGlllGrklgs.llgkkaeilGGliLiliGl 149
                 +++ l++l G++l + +  +k+ + GG   i++Gl
  EPX70685.1 246 FCTGLAVLSGKYLATkIQMHKVLLSGGCLFIVFGL 280
                 45567788888887734556777788888899887 PP

>> TerC  Integral membrane protein TerC family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.43   1.9e+03      67     109 ..       7      58 ..       3      63 .. 0.42
   2 ?   11.8   2.4   3.2e-05      0.14      27      99 ..      76     152 ..      67     284 .. 0.69

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.43
        TerC  67 glfLlytavkellekr........le.nklvkeekkkkkktkstllavviqi 109
                  l+L  ++v  + e+         ++ +++  +e++++++ +++l+ ++ +i
  EPX70685.1   7 LLLLATMSVAAMAESTpsnvllrrEAiENVDISEASSQNNFTRSLFFAISMI 58 
                 3444444555555554555554332222222222223333333355555555 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 3.2e-05
        TerC  27 eeqqkkalllGilgAlvlRill.illavallelf..dlilligglfLlytavkellekrle.nklvkeekkkkkktk 99 
                  e+ + +++lG + Al+   ll +ll+ a   lf  ++  l+ggl+ ++ +vk+++e +++ n +++ +++ k++++
  EPX70685.1  76 FENSRGMVFLGSFSALFCMTLLgVLLGHAAPMLFpkQFTDLLGGLLFVIFGVKMIREGIEAmNAHESIDEEFKRVED 152
                 556667889999999875554413444443344477********************988443444444444444433 PP

>> Nitrate_red_gam  Nitrate reductase gamma subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.25   1.1e+03     103     138 ..      25      61 ..       7      64 .. 0.67
   2 ?   12.7   0.2   1.5e-05     0.069      48      77 ..      89     118 ..      76     120 .. 0.88
   3 ?   -2.0   0.2      0.47   2.1e+03      84     106 ..     232     254 ..     220     277 .. 0.64

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.25
  Nitrate_red_gam 103 llLllRR.ltnkrvraatsasDkvvlllLllqillGl 138
                       +Ll R  + n  +++a+s+++++  l+ ++ +++G+
       EPX70685.1  25 NVLLRREaIENVDISEASSQNNFTRSLFFAISMIFGC 61 
                      4455444345667888888888888888888888886 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 1.5e-05
  Nitrate_red_gam  48 splFHvGilvvllgHlvGlliPksvtealg 77 
                      s lF + +l vllgH + +l+Pk++t++lg
       EPX70685.1  89 SALFCMTLLGVLLGHAAPMLFPKQFTDLLG 118
                      689***********************9987 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 0.47
  Nitrate_red_gam  84 qllalvaGliagvlalvGlllLl 106
                      +++ +++G+ +g  +++Gl++L 
       EPX70685.1 232 NMFGVFLGASLGHGFCTGLAVLS 254
                      34445566666666666666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       701  (0.0390987); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.28s 00:00:00.81 Elapsed: 00:00:00.46
# Mc/sec: 1879.42
//
Query:       EPX70686.1  [L=120]
Description: Set1C complex subunit Shg1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.1e-20   72.1   0.8    6.8e-20   71.7   0.8    1.2  1  COMPASS-Shg1  COMPASS (Complex proteins associated with Set1p
  ------ inclusion threshold ------
      0.019   14.9   0.1      0.026   14.4   0.1    1.3  1  Clathrin      Region in Clathrin and VPS


Domain annotation for each model (and alignments):
>> COMPASS-Shg1  COMPASS (Complex proteins associated with Set1p) component shg1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.7   0.8   7.6e-24   6.8e-20       1      95 [.      11     104 ..      11     112 .. 0.89

  Alignments for each domain:
  == domain 1  score: 71.7 bits;  conditional E-value: 7.6e-24
  COMPASS-Shg1   1 eLveefKkkGeFDklRkeiledfkeseaeqnlrkkveeivesevkkdpsllfknrgkaaaliegeidrsdvykkleegvdrivdqdlqeepklre 95 
                   eLv++fK++G+FD+lRk +le+fke+e+ + + +++++i+e e++kdpsl +k++  +a li g++dr++ y++++e++++ + ++ + + +++e
    EPX70686.1  11 ELVTRFKREGHFDRLRKFVLETFKEKES-EGFAEQIRTIAEMELDKDPSLKLKDHFRTAPLIAGAVDRTSLYENTMENIKNNILSKEELKLNVQE 104
                   69************************99.89******************************************9999998888766553444444 PP

>> Clathrin  Region in Clathrin and VPS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.1   2.9e-06     0.026       3      77 ..       2      71 ..       1     107 [. 0.80

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 2.9e-06
                CCCTTS-CCCCHHHHHCTT-HHHHCHHHCCHHHCHTS--HHHHHHHHHHHHHTT-HHHHHHTTSS---S-TTHHH CS
    Clathrin  3 eltdpidlsrvvklfeeaglleelleyLekvlkedskenpalqtallelyakyddpqeleeflkknnnydlekva 77
                e++++++++++v+ f+++g+++ l ++  +  k   +++++ + + + ++a+++   + +++lk  +++ ++ ++
  EPX70686.1  2 ESNKTVNVDELVTRFKREGHFDRLRKFVLETFK---EKESEGFAEQIRTIAEMEL--DKDPSLKLKDHFRTAPLI 71
                78999***************************5...5568999999999999986..788888888887665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       925  (0.0515924); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 851.72
//
Query:       EPX70687.1  [L=263]
Description: mitotic spindle checkpoint protein Dma1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.1e-18   65.9   0.1      5e-18   65.2   0.1    1.3  1  FHA           FHA domain
    1.5e-11   43.9  10.2    1.5e-11   43.9  10.2    2.3  2  zf-RING_11    RING-like zinc finger
    9.1e-07   29.1   0.0    1.5e-06   28.4   0.0    1.3  1  Yop-YscD_cpl  Inner membrane component of T3SS, cytoplasmic d
    6.6e-06   26.4  14.3    1.4e-05   25.3  13.2    2.1  2  zf-RING_2     Ring finger domain
  ------ inclusion threshold ------
      0.011   15.7   4.2      0.032   14.3   4.2    1.8  1  zf-ANAPC11    Anaphase-promoting complex subunit 11 RING-H2 f
      0.017   15.0  11.6      0.039   13.9  11.6    1.7  1  zf-RING_5     zinc-RING finger domain
      0.033   14.0  13.6        1.4    8.9  12.9    2.8  2  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
      0.069   13.4  10.0        4.5    7.6   9.9    3.2  3  zf-rbx1       RING-H2 zinc finger domain
       0.25   11.4  12.0       0.96    9.5  12.0    2.1  1  zf-RING_UBOX  RING-type zinc-finger
       0.43   10.5  10.4       0.39   10.6   8.4    1.9  2  PHD           PHD-finger
        1.2    9.1  15.2        1.3    9.0  13.2    2.2  2  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)


Domain annotation for each model (and alignments):
>> FHA  FHA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.2   0.1   3.1e-21     5e-18       3      69 .]      62     137 ..      60     137 .. 0.95

  Alignments for each domain:
  == domain 1  score: 65.2 bits;  conditional E-value: 3.1e-21
                 EESS.......TTSSEETTSTTSTTTEEEEEEETTCEEEEEEEESSSSSEEETTEEEST....TSEEEE-TTEEEEET CS
         FHA   3 iGRs.......sdcdivlddpsiSrkHalikfdkgsgkvyleDlgSknGtfvNgqrigk....gepveLksgdvielG 69 
                 iGR        + + iv+ ++++SrkHa+i+ +++  ++y++D+gS+ Gtf+N++r+++    ++p++++++d+++lG
  EPX70687.1  62 IGRYterfnggDVSAIVFRSKVVSRKHAQIYHENN--TWYIQDMGSSSGTFLNHVRLSPpsktSKPYPISNNDILQLG 137
                 888888888878899********************..***************************************98 PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.1       3.4   5.6e+03      25      29 .]     147     151 ..     147     151 .. 0.91
   2 !   43.9  10.2     9e-15   1.5e-11       1      29 []     191     219 ..     191     219 .. 0.99

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 3.4
  zf-RING_11  25 HfkCI 29 
                 H+ C+
  EPX70687.1 147 HYRCV 151
                 9***7 PP

  == domain 2  score: 43.9 bits;  conditional E-value: 9e-15
  zf-RING_11   1 eCsICLeefkpgqalfilpCsHtFHfkCI 29 
                 eC+ICL ++ p+qalf++pCsHt+H+kCI
  EPX70687.1 191 ECCICLMPVLPCQALFFAPCSHTYHYKCI 219
                 9***************************9 PP

>> Yop-YscD_cpl  Inner membrane component of T3SS, cytoplasmic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.4   0.0     9e-10   1.5e-06      28      82 ..      76     137 ..      70     139 .. 0.84

  Alignments for each domain:
  == domain 1  score: 28.4 bits;  conditional E-value: 9e-10
                   SEE---TTS-TT-EEEEEETTEEEEEE-CESS--EETTEE-S..ECC......--TTSEEEET CS
  Yop-YscD_cpl  28 DivLsDkevsrkhlkLeveeesvrledlgsrngllvngerve..ele......lrpgdvlelG 82 
                    iv + k vsrkh++++ e++ + ++d+gs  g+++n+ r +  + +      ++ +d l+lG
    EPX70687.1  76 AIVFRSKVVSRKHAQIYHENNTWYIQDMGSSSGTFLNHVRLSppS-KtskpypISNNDILQLG 137
                   699999**********************************99642.23467778888877777 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       2.9   4.7e+03      25      32 ..     146     153 ..     143     160 .. 0.71
   2 !   25.3  13.2   8.7e-09   1.4e-05       2      44 .]     191     236 ..     190     236 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 2.9
   zf-RING_2  25 fhreCler 32 
                 +h+ C++ 
  EPX70687.1 146 MHYRCVRA 153
                 89999865 PP

  == domain 2  score: 25.3 bits;  conditional E-value: 8.7e-09
   zf-RING_2   2 eCpICleelssadsvlllpCgHvfhreClerwlrssst...CPlCr 44 
                 eC+ICl+++ + + +   pC+H++h++C++  l++s+    C +Cr
  EPX70687.1 191 ECCICLMPVLPCQALFFAPCSHTYHYKCIRPTLAESHPyfsCFICR 236
                 9*********99999999*************98888778******9 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   4.2     2e-05     0.032      35      82 ..     192     240 ..     180     243 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 2e-05
                 -TTCSTTTTTS-.EEEBTTS-EEEHHHHHHHHHHHSTSSB-TTTSSB-- CS
  zf-ANAPC11  35 cpsckfpGddcp.lvlGkckhnfhlhcilkwletetskglcpmcrqtfk 82 
                 c  c +p   c  l +  c+h++h +ci   l++++    c +cr+   
  EPX70687.1 192 CCICLMPVLPCQaLFFAPCSHTYHYKCIRPTLAESHPYFSCFICRKYHD 240
                 778999*99997255677***************************9765 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9  11.6   2.4e-05     0.039       1      44 []     191     237 ..     190     237 .. 0.96

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 2.4e-05
   zf-RING_5   1 hCnkCfeklskeekfyltsCgHifCekClkkll...ekeavCpiCrk 44 
                 +C +C  ++ + ++ ++ +C+H+++ kC++  l   ++++ C iCrk
  EPX70687.1 191 ECCICLMPVLPCQALFFAPCSHTYHYKCIRPTLaesHPYFSCFICRK 237
                 599999999999*********************************97 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0     0.061        99      15      37 ..      35      57 ..      25      60 .. 0.81
   2 ?    8.9  12.9   0.00083       1.4       1      35 [.     191     227 ..     191     235 .. 0.70

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.061
  zf-C3HC4_2 15 vtpCgHvfCqkCilrsLeekneC 37
                v p  H+f  + + r++++k+ C
  EPX70687.1 35 VGPNTHSFSFDPLVRYWDKKSDC 57
                55668****************99 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00083
  zf-C3HC4_2   1 kCpiCldmlk..dpsvvtpCgHvfCqkCilrsLeekn 35 
                 +C iCl      +++  +pC H++++kCi+++L e+ 
  EPX70687.1 191 ECCICLMPVLpcQALFFAPCSHTYHYKCIRPTLAESH 227
                 699997654311455666*************998765 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0      0.19   3.2e+02      25      51 ..      31      57 ..      14      60 .. 0.75
   2 ?    7.6   9.9    0.0028       4.5      14      54 ..     192     235 ..     185     236 .. 0.68
   3 ?   -0.2   0.1      0.75   1.2e+03       2      11 ..     231     240 ..     230     251 .. 0.72

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.19
     zf-rbx1 25 cpvvlGeCgHaFHlhCiskWlktrkvC 51
                 +  +G  +H+F ++ + ++ ++++ C
  EPX70687.1 31 LTNFVGPNTHSFSFDPLVRYWDKKSDC 57
                46678999******9999988888888 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0028
     zf-rbx1  14 cieckapgdeecpvvl.GeCgHaFHlhCiskWlkt...rkvCPlc 54 
                 c  c  p    c+  +   C+H++H +Ci+  l +     +C +c
  EPX70687.1 192 CCICLMPVLP-CQALFfAPCSHTYHYKCIRPTLAEshpYFSCFIC 235
                 4555555555.65544389**********9988874444456655 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.75
     zf-rbx1   2 tCaiCrnele 11 
                 +C iCr+  +
  EPX70687.1 231 SCFICRKYHD 240
                 599**97654 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5  12.0   0.00059      0.96       1      38 [.     192     232 ..     192     233 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00059
  zf-RING_UBOX   1 CpIClelftdP...lv.lpCGHtFCreClwelskslegafkC 38 
                   C ICl +   P   l+  pC+Ht++ +C++ +   ++++f+C
    EPX70687.1 192 CCICLMPV-LPcqaLFfAPCSHTYHYKCIRPTLAESHPYFSC 232
                   99***976.5777655448**********5467778888888 PP

>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       2.1   3.5e+03      25      35 ..     146     156 ..     144     161 .. 0.75
   2 ?   10.6   8.4   0.00024      0.39       2      50 ..     192     236 ..     191     238 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 2.1
                 EETTTSSSTHS CS
         PHD  25 fHqkClkpple 35 
                 +H  C++  +e
  EPX70687.1 146 MHYRCVRARVE 156
                 69999987665 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00024
                 BTTTTSTTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSSTBSSTTTH CS
         PHD   2 CavCkkksdeeeelvqCdgCkrwfHqkClkppleseekpegewlCekCk 50 
                 C++C      + + ++   C++++H kC++p+l ++      + C  C+
  EPX70687.1 192 CCICLM-PVLPCQALFFAPCSHTYHYKCIRPTLAESHP---YFSCFICR 236
                 999999.88899999999**************994444...46776665 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       3.2   5.2e+03      21      31 ..     146     156 ..     145     160 .. 0.75
   2 ?    9.0  13.2   0.00077       1.3       1      41 []     192     235 ..     192     235 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 3.2
                 B-CHHHHHHHH CS
    zf-C3HC4  21 fCskCirkilk 31 
                 +++ C+r  ++
  EPX70687.1 146 MHYRCVRARVE 156
                 78899998776 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00077
                 -TTT-S-..-SS-E.E-TTS--B-CHHHHHHHHC.TSSB--TTT CS
    zf-C3HC4   1 CpiClee..akepnelleCkHsfCskCirkilks.rkkvkCPlC 41 
                 C iCl    ++++  + +C H++++kCir  l + + +++C +C
  EPX70687.1 192 CCICLMPvlPCQALFFAPCSHTYHYKCIRPTLAEsHPYFSCFIC 235
                 999998622566669**************999876778889999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       499  (0.027832); expected 358.6 (0.02)
Passed bias filter:                      347  (0.0193541); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.46
# Mc/sec: 1718.13
//
Query:       EPX70688.1  [L=359]
Description: mannosyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.5e-25   89.0   0.0    4.7e-25   88.1   0.0    1.5  1  Gly_transf_sug  Glycosyltransferase sugar-binding region cont
     0.0073   15.7   0.1      0.026   13.8   0.0    1.8  2  TcdA_TcdB       TcdA/TcdB catalytic glycosyltransferase domai
  ------ inclusion threshold ------
       0.02   14.3   0.0      0.031   13.7   0.0    1.3  1  Caps_synth      Capsular polysaccharide synthesis protein
      0.066   13.2   0.2       0.12   12.5   0.2    1.4  1  Phage_XkdX      Phage uncharacterised protein (Phage_XkdX)
       0.12   13.3   0.2        0.5   11.4   0.0    1.9  2  DUF4834         Domain of unknown function (DUF4834)


Domain annotation for each model (and alignments):
>> Gly_transf_sug  Glycosyltransferase sugar-binding region containing DXD motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.1   0.0   1.3e-28   4.7e-25       2      93 ..      75     157 ..      74     162 .. 0.95

  Alignments for each domain:
  == domain 1  score: 88.1 bits;  conditional E-value: 1.3e-28
  Gly_transf_sug   2 erekkaieslakahpdyqvvvlskelekvrvaildlefllsdtpwfeeakkllplfialsDllRlaiLykyGGiYlDtDvivlkslrnsiga 93 
                      ++k+a++s++k hp+y++ ++++e           ef+++++pwf+  ++++p +i+++D++R++iLy+yGGiYlD+Dv + +s+ n+++ 
      EPX70688.1  75 GKWKDAQQSCIKLHPNYEYKLWTDEAM--------REFVKENYPWFLPQYDAYPFNIERADVVRYFILYHYGGIYLDLDVGCNRSM-NPLLE 157
                     5799*********************99........99*************************************************.99885 PP

>> TcdA_TcdB  TcdA/TcdB catalytic glycosyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.1      0.24   8.5e+02       3      38 ..      64      99 ..      62     101 .. 0.66
   2 !   13.8   0.0   7.2e-06     0.026     201     221 ..     126     146 ..     124     174 .. 0.95

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.24
                EEEE--SS---HHHHHHHHHHHHHTTTSEEEEEE-T CS
   TcdA_TcdB  3 lHfvwigGkitdiqedYinvwldvnedydinlwvDs 38
                +H  w   +i+   +d  +  ++ +++y+ +lw D+
  EPX70688.1 64 IHQTWKTEDIPGKWKDAQQSCIKLHPNYEYKLWTDE 99
                566665544555555555556677899********8 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 7.2e-06
                 HHHHHHHHHHHH-EEEE-TT- CS
   TcdA_TcdB 201 sDivRllvLkelGGlyldvDm 221
                 +D+vR  +L+ +GG+yld+D+
  EPX70688.1 126 ADVVRYFILYHYGGIYLDLDV 146
                 5******************95 PP

>> Caps_synth  Capsular polysaccharide synthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   8.6e-06     0.031      40     141 ..      54     153 ..      40     185 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 8.6e-06
  Caps_synth  40 kkkeeenekk..IWvlWlqGldnaPeiVkkciksvkknaedyevvlLtkdNieeYvdlp.dfiieklekgkisaahfSDllRleLLkkyGGvWiDaTif 135
                 ++  e+      I + W    ++ P   k   +s  k +++ye+ l t++ ++e+v+    + + ++++  +++   +D++R  +L  yGG+ +D  + 
  EPX70688.1  54 HNTTESI--PrvIHQTWK--TEDIPGKWKDAQQSCIKLHPNYEYKLWTDEAMREFVKENyPWFLPQYDAYPFNI-ERADVVRYFILYHYGGIYLDLDVG 147
                 3333333..244888887..58899999999999999999***************9743245567888888865.569*****************8888 PP

  Caps_synth 136 ltkklp 141
                 ++++++
  EPX70688.1 148 CNRSMN 153
                 876655 PP

>> Phage_XkdX  Phage uncharacterised protein (Phage_XkdX)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.2   3.2e-05      0.12       7      25 ..      90     108 ..      86     112 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 3.2e-05
  Phage_XkdX   7 yYdwglwtkeqvrdaVgkg 25 
                 +Y+++lwt+e +r++V+ +
  EPX70688.1  90 NYEYKLWTDEAMREFVKEN 108
                 6***************855 PP

>> DUF4834  Domain of unknown function (DUF4834)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1      0.91   3.3e+03       9      19 ..       9      19 ..       5      70 .. 0.64
   2 ?   11.4   0.0   0.00014       0.5       2      55 ..     276     337 ..     275     358 .. 0.53

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.91
     DUF4834  9 ifiiailvigl 19
                + i+ ++++  
  EPX70688.1  9 FSILSLIIVFT 19
                33333222222 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00014
     DUF4834   2 hfLlfilifiiailviglsi.....lsvilrtvfg..lgsrkkss.ksaqkqfgnstnsnqq 55 
                 ++L+f+l+f+i+ l++g s+     +s+  r+ fg  ++s+++s  ++ ++  ++  +s+qq
  EPX70688.1 276 TILGFMLFFFIVFLFFGSSLkpaarVSRSSRRAFGspFSSKSSSPwRKFKQYVSTDESSDQQ 337
                 79****99999999999765221114555566688443333333321111111111111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (359 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       668  (0.0372581); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2507.52
//
Query:       EPX70689.1  [L=613]
Description: hypothetical protein SOCG_04267 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      1e-21   77.0   5.0    2.3e-21   75.9   5.0    1.6  1  Sec3_C_2        Sec3 exocyst complex subunit
    8.6e-13   48.2   0.0    1.7e-12   47.3   0.0    1.5  1  Sec3-PIP2_bind  Exocyst complex component SEC3 N-terminal PIP
    9.5e-06   24.3   1.5    9.5e-06   24.3   1.5    1.7  2  Sec3_C          Exocyst complex component Sec3


Domain annotation for each model (and alignments):
>> Sec3_C_2  Sec3 exocyst complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.9   5.0   3.8e-25   2.3e-21       3      85 ..     527     609 ..     525     610 .. 0.97

  Alignments for each domain:
  == domain 1  score: 75.9 bits;  conditional E-value: 3.8e-25
    Sec3_C_2   3 rlseldWseedaikdvlkelefsldeaiiesveelaeekielkevkdilqdsilGCeslfstlnlyslelstvlndvinieqq 85 
                  +s+l+Ws++ ++kd    +e  ++ ++++sv++l+ee+ +++++++ ++++++GC+sl st+nl+slels +lnd++  +qq
  EPX70689.1 527 EMSQLNWSNKATYKDYYDSMESQFNTSMKKSVQNLVEEDGKMEKIRENIDNCVAGCDSLSSTINLFSLELSEALNDIMTNNQQ 609
                 6899*************************************************************************999998 PP

>> Sec3-PIP2_bind  Exocyst complex component SEC3 N-terminal PIP2 binding PH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.3   0.0   2.9e-16   1.7e-12       1      89 [.      50     132 ..      50     133 .. 0.96

  Alignments for each domain:
  == domain 1  score: 47.3 bits;  conditional E-value: 2.9e-16
  Sec3-PIP2_bind   1 kkkprfLclsvtksgrkevrlhkvKensngssfsigktWkLkeLklvegrdpdkddpeFdltfdkpykweaesskeknaFirsLvklyk 89 
                     k kpr+++ls  ++++   ++h++K +++g+ +++ ++W+L eL+ ++++d+++     ++t++kp+ ++ +++ ++n+Fi sL k+y+
      EPX70689.1  50 KMKPRYIVLSYDEHTH-IFYIHRLKASDKGG-MTVVRSWPLFELQGITVIDDRD----VTFTINKPHLLRSNDTVARNKFIFSLAKQYM 132
                     579***********55.99************.*******************998....9***************************996 PP

>> Sec3_C  Exocyst complex component Sec3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.9   2.6       1.1   6.6e+03     261     303 ..     228     261 ..     201     295 .. 0.45
   2 !   24.3   1.5   1.6e-09   9.5e-06      18      68 ..     554     604 ..     541     612 .. 0.88

  Alignments for each domain:
  == domain 1  score: -4.9 bits;  conditional E-value: 1.1
      Sec3_C 261 ssgseeseslssssseekkteglalrksrkltlkssktganls 303
                  ++++         ++e k+ ++++ k    tl+ss +g+++ 
  EPX70689.1 228 IKDDQ---------TSERKPMSHTKLKHHARTLSSSISGKSTT 261
                 11111.........22222222333333333333333332222 PP

  == domain 2  score: 24.3 bits;  conditional E-value: 1.6e-09
      Sec3_C  18 eaanikrllesdkkveelkkdidkalkecdeldalltlysveLstlsedie 68 
                  ++++++l+e+d k+e++++ id++++ cd l+++++l+s eLs+  +di 
  EPX70689.1 554 MKKSVQNLVEEDGKMEKIRENIDNCVAGCDSLSSTINLFSLELSEALNDIM 604
                 5678******************************************99996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (613 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       950  (0.0529868); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.29s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 4151.46
//
Query:       EPX70690.1  [L=406]
Description: histone acetyltransferase Mst2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.9e-78  262.2   1.2    3.3e-78  261.5   1.2    1.4  1  MOZ_SAS         MOZ/SAS family
    1.7e-20   72.4   5.1    1.7e-20   72.4   5.1    2.0  2  zf-MYST         MYST family zinc finger domain
  ------ inclusion threshold ------
      0.053   14.0   0.0       0.11   13.0   0.0    1.5  1  Acetyltransf_7  Acetyltransferase (GNAT) domain


Domain annotation for each model (and alignments):
>> MOZ_SAS  MOZ/SAS family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  261.5   1.2   5.5e-82   3.3e-78       1     177 [.     159     334 ..     159     336 .. 0.98

  Alignments for each domain:
  == domain 1  score: 261.5 bits;  conditional E-value: 5.5e-82
     MOZ_SAS   1 ppGkeiYrkeklsvfevdGekeklycqnLcllaklFldhktlyydvepFlfYvlteadeegahivGyFskekesaeeynlaCilvlPpyqrkgyGklli 99 
                 ppG+eiYr++++svfevdG+++ +ycqnLcllak+Fl++k l+ydvepFlfY++te+d + ++i+GyFskek sa++yn++Cil+lP yqr+gyG +li
  EPX70690.1 159 PPGDEIYRDQSISVFEVDGQRQPIYCQNLCLLAKMFLQSKILCYDVEPFLFYIMTEYDGTCCKILGYFSKEKRSASNYNVSCILTLPIYQRRGYGAFLI 257
                 8************************************************************************************************** PP

     MOZ_SAS 100 efsYeLskrekkigtPekPlsdlgllsyrsywkeeilellkekekkkisieeisektgikeeDiistleelkllkyak 177
                 efsY Lsk e+k+g+PekPlsdlgllsyrsywk++++e+l  ++ +++sie+i+++t+++ +D+is+le+l++lky  
  EPX70690.1 258 EFSYLLSKAEGKYGSPEKPLSDLGLLSYRSYWKKRVAETLLGMS-STMSIENIAQATSMVCDDVISALESLSVLKYDM 334
                 ****************************************9865.99***************************9975 PP

>> zf-MYST  MYST family zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.4   5.1   2.8e-24   1.7e-20       4      55 .]     103     154 ..     101     154 .. 0.98
   2 ?   -3.5   0.1       1.4   8.1e+03      39      52 ..     330     343 ..     330     345 .. 0.65

  Alignments for each domain:
  == domain 1  score: 72.4 bits;  conditional E-value: 2.8e-24
     zf-MYST   4 iekieiGeyeiktWYfSpYPeelankekLyvCefClkYmksakelerHkkkC 55 
                 i+ + +G+y++k+WY SpYPee++ +++Ly+Ce ClkYm+s+  l+rH+ kC
  EPX70690.1 103 IRNVYFGNYRVKPWYTSPYPEEYSCSRNLYLCESCLKYMNSDYVLQRHRMKC 154
                 899************************************************* PP

  == domain 2  score: -3.5 bits;  conditional E-value: 1.4
     zf-MYST  39 lkYmksakelerHk 52 
                 lkY  ++k +  H 
  EPX70690.1 330 LKYDMKKKIYVLHV 343
                 56777777777665 PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   1.8e-05      0.11      14      49 ..     222     265 ..     201     294 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.8e-05
                     EEEEEEEEEES...TCTEEEEE-GGGTTSSHHHHHHHH.....T CS
  Acetyltransf_7  14 ivGfialslld...aeitrlaVdpeyrgkGiGraLlea.....a 49 
                     i+G+ + + ++   ++  ++ ++p y+++G+G  L+e+     +
      EPX70690.1 222 ILGYFSKEKRSasnYNVSCILTLPIYQRRGYGAFLIEFsyllsK 265
                     445443333335433444499****************8444331 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (406 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       691  (0.0385409); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 2851.52
//
Query:       EPX70691.1  [L=998]
Description: AGC/PKC protein kinase Pck1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.3e-64  216.1   0.1    1.4e-63  214.7   0.0    1.8  2  Pkinase         Protein kinase domain
    3.6e-39  134.6   0.0    6.5e-39  133.8   0.0    1.4  1  Pkinase_Tyr     Protein tyrosine kinase
      2e-19   69.2  28.7    4.5e-11   42.5   7.8    2.4  2  C1_1            Phorbol esters/diacylglycerol binding domain 
    1.8e-17   63.2   9.4    8.6e-09   35.4   1.3    2.5  2  HR1             Hr1 repeat
      2e-08   34.8   0.5      2e-08   34.8   0.5    2.3  1  Pkinase_C       Protein kinase C terminal domain
    8.1e-08   32.5   0.0    1.8e-07   31.4   0.0    1.5  1  C2              C2 domain
    6.4e-05   22.1   0.1    6.4e-05   22.1   0.1    1.6  2  Haspin_kinase   Haspin like kinase domain
    0.00016   21.1   0.0    0.00043   19.7   0.0    1.7  2  Kinase-like     Kinase-like
     0.0074   16.6  21.0      0.083   13.2   5.8    2.5  2  C1_2            C1 domain
  ------ inclusion threshold ------
        1.5    8.7  24.7      0.033   14.1   4.8    2.5  2  PHD             PHD-finger
        6.9    6.4  13.6       0.28   10.9   1.2    2.7  2  DNA_RNApol_7kD  DNA directed RNA polymerase, 7 kDa subunit


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.3       1.3   2.2e+03     194     253 ..      82     149 ..      79     155 .. 0.57
   2 !  214.7   0.0   8.6e-67   1.4e-63       2     264 .]     676     934 ..     675     934 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 1.3
                 S-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS...........-HHHHHHHHHHT-SSGCCST CS
     Pkinase 194 kppfsgekgkekvekeldqlekilkilgetkeklpeasei...........seeakdllkkllkkdpkkRl 253
                 k+p ++++g++++ +e +   + +++l  +k  +p++ +            ++++ + ++k+l+   k+R 
  EPX70691.1  82 KHPSKQQDGDNQILHESR---SAFELLSSEKPLTPQKISTmlqhlqmrlsiEQQCVSGIEKILHLYSKERK 149
                 666776666664444444...45555553333333222224555566666688888888888888888885 PP

  == domain 2  score: 214.7 bits;  conditional E-value: 8.6e-67
                 EEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHS...CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS-- CS
     Pkinase   2 ekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklk...hpnivrlyevfeekdelylvleyveggeladllerkgsls 96 
                 + +  lG+G+fGkV+ a  k t+k++AvK++kke + k++e +++++E +++   +   hp++++++ +f++++++y+v+ey++gg+l+ +++ ++++s
  EPX70691.1 676 TFIAVLGKGNFGKVMLAEYKPTKKHYAVKVLKKEFILKNEElDSLRTEKHVFDAANkekHPFLLNMFASFQTSTRVYFVMEYIQGGDLMVHVQ-RQQFS 773
                 56788*********************************9999*********99888889*********************************8.589** PP

                 HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEE.SSSSCSBCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS CS
     Pkinase  97 eeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlake.lessskltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgk 194
                  ++a+++ ++++ +l+y H++gi +rDlK +NiL+ ++g++Ki+D+Gl+ke ++ ++++++f+gt+e++APE+l e++y+k+vD+W+ Gv++y++l g+
  EPX70691.1 774 VKRARFYGAEVCLALKYFHENGIAYRDLKLDNILLCSNGHIKIADYGLCKEnMSAGNTTSTFCGTPEFMAPEILLEQQYTKNVDWWAFGVLMYQMLLGQ 872
                 *************************************************9725555669**************************************** PP

                 -STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTT.....HHHHHTSGGG CS
     Pkinase 195 ppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRlt.....aeellqhpyl 264
                  pf+ge+++e + ++l++             +   + +++ +a +ll+ ll++dp+kRl+     a e+++hp++
  EPX70691.1 873 SPFKGEDEEEIFDAILTD-------------EPLFPINMPADAVSLLRGLLNRDPEKRLGsgptdALEIMNHPFF 934
                 ****88888855555555.............56677899*********************9*99*********98 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.8   0.0     4e-42   6.5e-39       2     249 ..     676     917 ..     675     920 .. 0.89

  Alignments for each domain:
  == domain 1  score: 133.8 bits;  conditional E-value: 4e-42
                  EEEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTT..SSHHHHHHHHHHHHHHHTS...-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHH CS
  Pkinase_Tyr   2 elgkklGeGafGkVvegtlkgekekkevkVavKtlkee..ateeekeelleeakimkkl...khpnivkllgvctkeepllivteyvkgGdLlkfLrk 94 
                  ++   lG+G+fGkV+ +++k     ++ + avK+lk+e   ++ee ++l +e +++ +    khp ++++ +    + ++++v+ey++gGdL  ++++
   EPX70691.1 676 TFIAVLGKGNFGKVMLAEYK----PTKKHYAVKVLKKEfiLKNEELDSLRTEKHVFDAAnkeKHPFLLNMFASFQTSTRVYFVMEYIQGGDLMVHVQR 769
                  56789***************....677788899997762246677899999*99998765458999***************************99999 PP

                  TCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHH CS
  Pkinase_Tyr  95 kekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfG 192
                  +   ++++k+   + ++v+ +++y +++ +  rdl   N+Ll++n ++ki+D+GL+++ ++  +++  ++     ++mapE+l e+++t++ D W+fG
   EPX70691.1 770 Q---QFSVKRARFYGAEVCLALKYFHENGIAYRDLKLDNILLCSNGHIKIADYGLCKENMSAGNTT--STFCGTPEFMAPEILLEQQYTKNVDWWAFG 862
                  8...99***************************************************995555554..44556779********************** PP

                  HHHHHHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS CS
  Pkinase_Tyr 193 vllwEiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeR 249
                  vl++ ++  g+sp++g ++ee+++++ +++ l  p ++p++  +l++  +++dpe+R
   EPX70691.1 863 VLMYQMLL-GQSPFKGEDEEEIFDAILTDEPL-FPINMPADAVSLLRGLLNRDPEKR 917
                  *****997.*****************988876.578899999999999999999999 PP

>> C1_1  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.5   7.8   2.7e-14   4.5e-11       1      50 [.     414     461 ..     414     463 .. 0.95
   2 !   32.3  12.8     4e-11   6.5e-08       1      52 [.     481     532 ..     481     533 .. 0.95

  Alignments for each domain:
  == domain 1  score: 42.5 bits;  conditional E-value: 2.7e-14
                 --EEEE--SS--B-TTT-SB--SSSS-EEEETTT--EE-CCCCTTS-SBT CS
        C1_1   1 HhwvhrnfkqptfCkhCgeflwgkekqglkCswCkllvHkkChekvpkec 50 
                 H++v+++f+q ++C+ Cge++    ++gl+C++C++++HkkC+ k+   c
  EPX70691.1 414 HQFVQKQFYQIMRCAVCGELF--SYSPGLQCENCSFVCHKKCLYKILAGC 461
                 *********************..*******************99988777 PP

  == domain 2  score: 32.3 bits;  conditional E-value: 4e-11
                 --EEEE--SS--B-TTT-SB--SSSS-EEEETTT--EE-CCCCTTS-SBTTC CS
        C1_1   1 HhwvhrnfkqptfCkhCgeflwgkekqglkCswCkllvHkkChekvpkecgc 52 
                 H++++ +    ++C+hCg fl   +k +++C++C+l++H +C+++vp  cg+
  EPX70691.1 481 HRFEPLTSLGAHWCAHCGFFLPLRRKDCFRCEECNLTCHGQCAHLVPDHCGM 532
                 99999999*************66***************************97 PP

>> HR1  Hr1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.4   1.3   5.3e-12   8.6e-09       3      66 ..       9      67 ..       7      70 .. 0.93
   2 !   32.1   1.5   5.7e-11   9.2e-08       1      67 [.     119     181 ..     119     183 .. 0.93

  Alignments for each domain:
  == domain 1  score: 35.4 bits;  conditional E-value: 5.3e-12
         HR1  3 eelekklekElkireGAenllraleskktqnkkvrqeaeselsesnskielLreqLeelqasvq 66
                 + +kk+e+E  ++ GA+ ++      +t+n +v+ + e+++  s+++i +L+e+++ l+ +++
  EPX70691.1  9 HDAYKKIEREESLIMGAKAMVA-----STKNPEVKKRLETNIAVSENNITYLQERIQALKLEQH 67
                6779******************.....9*******************************99776 PP

  == domain 2  score: 32.1 bits;  conditional E-value: 5.7e-11
         HR1   1 rleelekklekElkireGAenllraleskktqnkkvrqeaeselsesnskielLreqLeelqasvqn 67 
                 +l+ l+ +l +E++   G+e++l++++    + +k   ++  +l+e ++k++lL++++++++  + +
  EPX70691.1 119 MLQHLQMRLSIEQQCVSGIEKILHLYS----KERKDTHDVSVKLREGKQKVNLLKRSMKRYNELHIP 181
                 689**********************98....7888889************************98865 PP

>> Pkinase_C  Protein kinase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.8   0.5   1.2e-11     2e-08       5      45 ..     959     994 ..     956     994 .. 0.95

  Alignments for each domain:
  == domain 1  score: 34.8 bits;  conditional E-value: 1.2e-11
   Pkinase_C   5 eDtsNFDpeFTeedprdtppddmpagspltssvqenFrGFt 45 
                  D +NFD+eFT++ p++tp++     + lt+++qe FrGF+
  EPX70691.1 959 HDLNNFDEEFTSAVPNLTPVN-----TVLTRQQQECFRGFS 994
                 599******************.....89************8 PP

>> C2  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4   0.0   1.1e-10   1.8e-07       1      92 [.     207     296 ..     207     307 .. 0.83

  Alignments for each domain:
  == domain 1  score: 31.4 bits;  conditional E-value: 1.1e-10
                 TEEEEEEEEEESSSSSST....TSSCEEEEEEEEECEEEEEE-SCSSSSSSEEEEEEEEEESCHTTSEEEEEEEEECSSSTEEEEEEEEEEGHHHH CS
          C2   1 gklevtvieAknLpnkdk....kgssdpyvkvsldgkqkakTrviknslnPvWnekftfevaeleeakLeveVfdndrlskddfiGkveiplstll 92 
                 g+l++t+++ +nL++        + + +y ++++d++q+a++r  ++    +W+e+ftf+v+   ++++++ ++d+++ + d  iG + ip s ++
  EPX70691.1 207 GRLQLTIHSVRNLEHTSLlqqnLSPTFSYTVCYVDDTQVARSRSSPTD---QWDESFTFDVHR--AKEVQLLIYDKKK-EADVPIGFLLIPASLIA 296
                 689**********999665432333667899999*********55555...9***********..*************.9999*****99988754 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.8       3.5   5.7e+03      86     121 ..     109     148 ..      76     164 .. 0.49
   2 !   22.1   0.1   3.9e-08   6.4e-05     144     266 ..     709     834 ..     696     843 .. 0.83

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 3.5
  Haspin_kinase  86 qilelckikkilneadlasllnd....seklssevyqtke 121
                    + l+ +ki+++l++ ++  ++++    +++   ++y  + 
     EPX70691.1 109 KPLTPQKISTMLQHLQMRLSIEQqcvsGIEKILHLYSKER 148
                    3333444444444443333333333333333344443333 PP

  == domain 2  score: 22.1 bits;  conditional E-value: 3.9e-08
  Haspin_kinase 144 elsl..kelkslklvkgtypglllllqdkvlkekpdfyseqqlflvlllkdkGtdLeevklkswkqalsifwqivkiLyvaE.tkfeFEHRdLhld 236
                    e  l  +el sl+  k +++      + ++l+  + f+++++++ v++  ++G+ + +v+ ++++     f+     L++    +     RdL+ld
     EPX70691.1 709 EFILknEELDSLRTEKHVFDAANKEKHPFLLNMFASFQTSTRVYFVMEYIQGGDLMVHVQRQQFSVKRARFYGAEVCLALKYfHENGIAYRDLKLD 804
                    444455899999******9999999999999999999***************************999999**877666553213345668****** PP

  Haspin_kinase 237 niLvdknlnvtlidlklsRlessegkvlyt 266
                    niL+ +n+++ + d+ l++ + s g++  t
     EPX70691.1 805 NILLCSNGHIKIADYGLCKENMSAGNTTST 834
                    ******************999887777665 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       1.5   2.5e+03      19      63 ..     680     724 ..     678     745 .. 0.78
   2 !   19.7   0.0   2.6e-07   0.00043     152     288 .]     783     917 ..     703     917 .. 0.75

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1.5
  Kinase-like  19 llkkgdrsvvfevkdqetgeplavkvfllpseaskkdlerlkeqe 63 
                  +l+kg++++v++++ + t++  avkv   +    +++l+ l+ ++
   EPX70691.1 680 VLGKGNFGKVMLAEYKPTKKHYAVKVLKKEFILKNEELDSLRTEK 724
                  789999999999999999999999998766666666777776655 PP

  == domain 2  score: 19.7 bits;  conditional E-value: 2.6e-07
  Kinase-like 152 qlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvlsevekgfaPpEllgsrggytrknktkmthkldaWqlGlviyriwclklP 249
                  ++     + +++g+   +++ dn+ll  +g +++ + + L +   ++  +++      pE+++         + ++t ++d W+ G+ +y +   + P
   EPX70691.1 783 EVCLALKYFHENGIAYRDLKLDNILLCSNGHIKIADYG-LCKENMSAG-NTTSTFCGTPEFMAPEIL----LEQQYTKNVDWWAFGVLMYQMLLGQSP 874
                  44444578999*************************97.888887777.777777789******888....5669*********************** PP

  Kinase-like 250 ltlateeakeew.....kfklckkipekvkaLlkkfLqlsqedR 288
                  +    ee + +       ++++ ++p     Ll+++L+++ e+R
   EPX70691.1 875 FKGEDEEEIFDAiltdePLFPI-NMPADAVSLLRGLLNRDPEKR 917
                  *887777666663444333343.6777777899******99998 PP

>> C1_2  C1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   5.8   5.1e-05     0.083      14      46 ..     420     453 ..     410     454 .. 0.80
   2 !    8.8   7.2    0.0012         2      11      47 .]     484     523 ..     474     523 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 5.1e-05
        C1_2  14 dssesfnCsaCgrkidgff.YsCseCdfslhvrC 46 
                 + ++ ++C +Cg+  +++    C+ C f+ h++C
  EPX70691.1 420 QFYQIMRCAVCGELFSYSPgLQCENCSFVCHKKC 453
                 5567899*******544448***99********* PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.0012
        C1_2  11 kgedssesfnCsaCgrk..idgff.YsCseCdfslhvrCa 47 
                 ++ +s + ++C  Cg       ++ ++C+eC+ + h +Ca
  EPX70691.1 484 EPLTSLGAHWCAHCGFFlpLRRKDcFRCEECNLTCHGQCA 523
                 466788999******8766444446**************8 PP

>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   4.8     2e-05     0.033       1      30 [.     426     454 ..     426     459 .. 0.94
   2 ?    0.0  11.9       0.5   8.1e+02       2      34 ..     494     527 ..     493     534 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2e-05
                 SBTTTTSTTSTTSCEEEETTTSCEEETTTS CS
         PHD   1 rCavCkkksdeeeelvqCdgCkrwfHqkCl 30 
                 rCavC++     +  +qC++C+  +H+kCl
  EPX70691.1 426 RCAVCGE-LFSYSPGLQCENCSFVCHKKCL 454
                 6******.89999****************8 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.5
                 BTTTTS.TTSTTSCEEEETTTSCEEETTTSSSTH CS
         PHD   2 CavCkk.ksdeeeelvqCdgCkrwfHqkClkppl 34 
                 Ca C+       ++   C++C+ ++H +C ++  
  EPX70691.1 494 CAHCGFfLPLRRKDCFRCEECNLTCHGQCAHLVP 527
                 8888887666789999*************98765 PP

>> DNA_RNApol_7kD  DNA directed RNA polymerase, 7 kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   5.3      0.62     1e+03       3      25 ..     427     447 ..     426     456 .. 0.87
   2 ?   10.9   1.2   0.00017      0.28       3      23 ..     494     514 ..     493     516 .. 0.97

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.62
                     -SSS--B----SSS----SSS-- CS
  DNA_RNApol_7kD   3 CgeCgaevslkkgdpiRCkeCGh 25 
                     C+ Cg+ +s ++g  ++C +C +
      EPX70691.1 427 CAVCGELFSYSPG--LQCENCSF 447
                     *************..******86 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00017
                     -SSS--B----SSS----SSS CS
  DNA_RNApol_7kD   3 CgeCgaevslkkgdpiRCkeC 23 
                     C+ Cg    l+++d  RC eC
      EPX70691.1 494 CAHCGFFLPLRRKDCFRCEEC 514
                     ********************* PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (998 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1135  (0.0633053); expected 358.6 (0.02)
Passed bias filter:                      525  (0.0292822); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.78u 0.29s 00:00:01.07 Elapsed: 00:00:00.45
# Mc/sec: 6652.77
//
Query:       EPX70692.1  [L=138]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.5e-14   53.0   3.1    4.5e-14   52.7   3.1    1.2  1  DUF4452   Domain of unknown function (DUF4452)
     0.0057   16.2   0.0     0.0078   15.8   0.0    1.2  1  PPS_PS    Phosphopantothenate/pantothenate synthetase


Domain annotation for each model (and alignments):
>> DUF4452  Domain of unknown function (DUF4452)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.7   3.1   5.1e-18   4.5e-14      36     149 ..      18     121 ..       5     135 .. 0.77

  Alignments for each domain:
  == domain 1  score: 52.7 bits;  conditional E-value: 5.1e-18
     DUF4452  36 aaltafrakfeagrsFdleDDleFCPnLLteddlvsihssssdRssLssgsPessPlqtqvqpqqvapslslssassayipasyqsqaselklhqPsat 134
                  +l +fr++fe +r+Fd+eDDleFCP L ++++l +i        s + +sP  sP+  ++ p+ + +  + + a   y p+s+q++        Ps+ 
  EPX70692.1  18 YQLHEFRSSFEKARTFDIEDDLEFCPAL-SDEELSAIYH--MTGLSPTNSSPSLSPMTPNMYPNAIPTIQTGNYAGMQYAPSSLQHN--------PSSR 105
                 57899*********************85.8999999973..333455677999***9999999777666666677778888777765........6665 PP

     DUF4452 135 Rtr.naiPivnPstgi 149
                  ++  +iPi++P t+ 
  EPX70692.1 106 QKKsSSIPIIDPVTRA 121
                 555499*******984 PP

>> PPS_PS  Phosphopantothenate/pantothenate synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   8.7e-07    0.0078     116     145 ..     100     129 ..      91     136 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 8.7e-07
      PPS_PS 116 LNPlsRtartatitivdnvvRalpnlteav 145
                  NP sR  ++++i+i+d v+Ra   lt  +
  EPX70692.1 100 HNPSSRQKKSSSIPIIDPVTRAPAVLTGPA 129
                 6*********************88887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       290  (0.0161749); expected 358.6 (0.02)
Passed bias filter:                      212  (0.0118244); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.31s 00:00:00.82 Elapsed: 00:00:00.51
# Mc/sec: 808.44
//
Query:       EPX70693.1  [L=993]
Description: karyopherin Kap14 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.4e-12   46.6   0.1    5.7e-11   42.2   0.0    3.5  3  IBN_N      Importin-beta N-terminal domain
    1.2e-05   24.1   7.6      0.045   12.3   0.0    3.8  4  Adaptin_N  Adaptin N terminal region
     0.0014   17.2   0.8     0.0042   15.6   0.3    2.1  2  CAS_CSE1   CAS/CSE protein, C-terminus
  ------ inclusion threshold ------
      0.024   14.9   3.1         11    6.6   0.0    5.9  6  HEAT       HEAT repeat
      0.026   14.6   0.1      0.026   14.6   0.1    4.8  6  Xpo1       Exportin 1-like protein
      0.058   13.7   1.5       0.12   12.7   0.2    2.1  2  YnfE       Uncharacterized YnfE-like
        0.1   12.7   0.7         13    6.0   0.1    3.9  3  Arm        Armadillo/beta-catenin-like repeat


Domain annotation for each model (and alignments):
>> IBN_N  Importin-beta N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.2   0.0   2.2e-14   5.7e-11       1      73 [.      24      99 ..      24     100 .. 0.90
   2 ?   -3.3   0.0       3.4   8.7e+03      13      36 ..     497     520 ..     496     549 .. 0.81
   3 ?   -0.9   0.0      0.62   1.6e+03      10      39 ..     769     801 ..     762     804 .. 0.75

  Alignments for each domain:
  == domain 1  score: 42.2 bits;  conditional E-value: 2.2e-14
                HHHHHHHHHCSTCHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHHHHGGSCCCHC...GSXHHHH.HHHHHHHHHHHH CS
       IBN_N  1 AekqLkqlekqpgflsallqilanseselevRqlAalyLknlitkhWsdeeekq...slpseek.eqIrnnllnllg 73
                Ae  Lk++e++p+f ++l +i+a+ +   ++R+ +++yL+++it+hWs+  e++   ++p+e+  + +r++ll  l+
  EPX70693.1 24 AELELKKFESLPEFPLYLTNIAASAAPF-PLRLGSLIYLQRFITHHWSPLFEQFkegPIPDENVkRAVRETLLRQLI 99
                8999*******************99988.*******************888888888999887669*****997665 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 3.4
                 CHHHHHHHHHHCTTSHHHHHHHHH CS
       IBN_N  13 gflsallqilanseselevRqlAa 36 
                 +f++  l+ ++n + +  v+++A+
  EPX70693.1 497 EFFQVFLNCISNADQSDLVKYAAV 520
                 578888888999666668888886 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.62
                 CSTCHHHHHHHHHHC...TTSHHHHHHHHHHHH CS
       IBN_N  10 kqpgflsallqilan...seselevRqlAalyL 39 
                 +qp f +++++++++   ++ e  + +l++++L
  EPX70693.1 769 EQPRFIQSIIYVFSKminKNVEAVLNFLSGSTL 801
                 689999999999888663555567778888887 PP

>> Adaptin_N  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.3   0.0   1.7e-05     0.045     336     408 ..      85     159 ..      81     229 .. 0.63
   2 ?    1.9   0.2     0.025        63     162     298 ..     383     530 ..     343     539 .. 0.63
   3 !   11.2   0.1   3.8e-05     0.097     162     280 ..     509     637 ..     487     701 .. 0.64
   4 ?    1.7   0.5     0.029        73     156     224 ..     720     789 ..     711     798 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.7e-05
                 THHHHHHH.HHHHTTSSXXHHHHHHHHHHHHHHHHHS.CCHHHHHHHHHHHHHTTXXHHHHHHHHHHHHHHHHHS CS
   Adaptin_N 336 Nvkeivke.LkkyvkevadedfksklvkaIgrlaekf.atdaewvldvllellslsgesvkdeivevirdliqkv 408
                 Nvk+ v+e L+ ++ ++ ++++ +++++a++ +a    ++++  v + +l+ll++++e+  +++++v+++li + 
  EPX70693.1  85 NVKRAVREtLLRQLISLENHQLNKAVAYAVSLIANVDfPDEWPEVFPCVLQLLKSDNEGSINAALDVLCELIDES 159
                 555544433555555666666666666666666543226666666666666666666666666666666666543 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.025
                 T-SSH.....HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHCS-HHHHHHHHHHHCC---SSHHHH...HHHHHHHCGGCG.....CSSCHHHH CS
   Adaptin_N 162 sdkdp.....gvvlaAvalleeikkndrlllkllpklvrrLcnllteldpwlqvkiiklltrlarqepeersk.kellesllnllq.....ssnnaVll 249
                 +++++      v +aAv++l + +++ +l  k l++ +r L  +  + +++  v    ll+ ++  + ++++  +e+le +++ ++     s  + +l+
  EPX70693.1 383 NETNYdsfvdTVRGAAVNVLSSFEQHTNL--K-LQQQIRELAAAYVSENDINWVDQEALLYTCCSIDAASDDTyDEYLEPVYKAISvriqtSNVPEILM 478
                 55554455557888888888888444444..3.444555555555555555555555566666666666665556777777777777777766678888 PP

                 HHHHHCC.HCCCCSTHHHCCHHCHHHHHHSSCCT..CHHHHHCHHHHHHHHX CS
   Adaptin_N 250 etvnliv.elapknelivlavnaLvrllsskden..lryvaLrtllkivkke 298
                 +    +v +++++++l+  + +++  ++s+ d++  ++y+a++ + ++++ +
  EPX70693.1 479 AGFFNFVgYFSESTPLAIEFFQVFLNCISNADQSdlVKYAAVKGIERLCSVS 530
                 7654444266666668788888888888866665558888888888888765 PP

  == domain 3  score: 11.2 bits;  conditional E-value: 3.8e-05
                 T-SSHHHHHHHHHHHHHHHCCCCCCC...HHHHHHHCCHHHHHHCS-HHHHHHHHHHHCC---SSHHHH....HHHHHHHCGGCG.............. CS
   Adaptin_N 162 sdkdpgvvlaAvalleeikkndrlll...kllpklvrrLcnllteldpwlqvkiiklltrlarqepeersk..kellesllnllq.............. 241
                 +d++ +v++aAv+ +e++ ++    +   ++ p   + L++++ ++++   v +++ +t+l+r + +++++  +++++ l nl++              
  EPX70693.1 509 ADQSDLVKYAAVKGIERL-CSVSQVKpssSVQPAVLKVLRDFVPNSSDESLVLLVEAITALTRLDCQKAAEpdSSFIPVLFNLIAnnpsdpylsglied 606
                 677888888888888888.55444444447888888888888888888888888888888888888877666667777777777754444333333333 PP

                 .............CSSCHHHHHHHHHCCHCCCCSTHHHCCHHCHHHHHHSSC CS
   Adaptin_N 242 .............ssnnaVlletvnlivelapknelivlavnaLvrllsskd 280
                              s                     +++  +  L + ls++d
  EPX70693.1 607 tfeditseaasyeS---------------------VCETTMPELLQVLSHPD 637
                 33332111112222.....................33333333333333333 PP

  == domain 4  score: 1.7 bits;  conditional E-value: 0.029
                 HHHHCT..T-SSHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHCS-HHHHHHHHHHHCC---SSH CS
   Adaptin_N 156 eikell..sdkdpgvvlaAvalleeikkndrlllkllpklvrrLcnllteldpwlqvkiiklltrlarqep 224
                  +++ll  +++d ++ l  + lle +++ ++ +l+l p l ++L++++    p  +  ii++++++++++ 
  EPX70693.1 720 ILQKLLlsKSDDSSCFLVGTILLELLEHANQ-ALDLQPVLLSCLQRAVVAEQPRFIQSIIYVFSKMINKNV 789
                 5778887777779999999999999944444.47**************999999999999***99999875 PP

>> CAS_CSE1  CAS/CSE protein, C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       0.6   1.5e+03      97     126 ..     562     591 ..     558     634 .. 0.79
   2 !   15.6   0.3   1.7e-06    0.0042     195     278 ..     705     788 ..     692     891 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 0.6
    CAS_CSE1  97 FEalgalvrlaakadpaavskleeaLfpvf 126
                  Ea++al rl +++ ++  s++   Lf+ +
  EPX70693.1 562 VEAITALTRLDCQKAAEPDSSFIPVLFNLI 591
                 577777777777777777777777777654 PP

  == domain 2  score: 15.6 bits;  conditional E-value: 1.7e-06
    CAS_CSE1 195 sqeivaenklepvLgiFqkLiaskandeegFdlLesvieslpaevlekylktilsllltrlqnsktekfkkrlvvflslvsakd 278
                 s+ei+    l+ +L i qkL+ sk++d+  F +   ++e l+ +  +  l+ +l   l+r       +f+++++  +s ++ k+
  EPX70693.1 705 SSEISGASGLQYILYILQKLLLSKSDDSSCFLVGTILLELLEHANQALDLQPVLLSCLQRAVVAEQPRFIQSIIYVFSKMINKN 788
                 678888899**********************9999999999*99999**************************98887777666 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0         7   1.8e+04       7      20 ..      11      24 ..      10      24 .. 0.81
   2 ?    0.1   0.1      0.54   1.4e+03       2      14 ..     130     142 ..     129     158 .. 0.69
   3 ?   -1.9   0.0       2.2   5.7e+03      15      27 ..     393     405 ..     391     408 .. 0.83
   4 ?    6.6   0.0    0.0041        11      10      30 ..     509     529 ..     498     530 .. 0.78
   5 ?    0.4   0.1      0.41   1.1e+03       2      16 ..     626     640 ..     626     653 .. 0.80
   6 ?    0.6   0.0      0.36   9.2e+02       7      20 ..     933     946 ..     930     946 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 7
                HHHT-SSHHHHHHH CS
        HEAT  7 kllsDpspeVReaA 20
                +l + p+ +VR  A
  EPX70693.1 11 ELAQYPETNVRLQA 24
                67788999***987 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.54
                 HHHHHHHHT-SSH CS
        HEAT   2 lPlllkllsDpsp 14 
                 +P++l+ll++++ 
  EPX70693.1 130 FPCVLQLLKSDNE 142
                 799*****66654 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 2.2
                 HHHHHHHHHHHHH CS
        HEAT  15 eVReaAakaLgal 27 
                  VR aA++ L  +
  EPX70693.1 393 TVRGAAVNVLSSF 405
                 69*****999875 PP

  == domain 4  score: 6.6 bits;  conditional E-value: 0.0041
                 T-SSHHHHHHHHHHHHHHHHC CS
        HEAT  10 sDpspeVReaAakaLgalaev 30 
                  D+s  V +aA+k + +l++v
  EPX70693.1 509 ADQSDLVKYAAVKGIERLCSV 529
                 479999*************97 PP

  == domain 5  score: 0.4 bits;  conditional E-value: 0.41
                 HHHHHHHHT-SSHHH CS
        HEAT   2 lPlllkllsDpspeV 16 
                 +P ll+ ls+p+p+ 
  EPX70693.1 626 MPELLQVLSHPDPNL 640
                 899*********975 PP

  == domain 6  score: 0.6 bits;  conditional E-value: 0.36
                 HHHT-SSHHHHHHH CS
        HEAT   7 kllsDpspeVReaA 20 
                 +l +D+ p++R++A
  EPX70693.1 933 ELAKDEYPSIRSSA 946
                 5779*******998 PP

>> Xpo1  Exportin 1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.1     1e-05     0.026       4      55 ..     106     158 ..     103     166 .. 0.88
   2 ?   -0.2   0.2      0.36   9.2e+02      80     134 ..     391     444 ..     359     454 .. 0.77
   3 ?   -1.6   0.0         1   2.6e+03      99     136 ..     490     527 ..     467     538 .. 0.70
   4 ?   -0.3   0.0       0.4     1e+03      87     116 ..     502     551 ..     495     576 .. 0.66
   5 ?   -1.8   0.0       1.1   2.9e+03      25      43 ..     605     623 ..     559     636 .. 0.56
   6 ?   -1.5   0.1       0.9   2.3e+03      83      83 ..     754     754 ..     683     798 .. 0.58

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1e-05
                 HHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHHCT..HHHHHHHHHHHHHHHHH CS
        Xpo1   4 lrnklaealaelflqeypnnWpsffddllsllss.spsglelllriLkvlpeE 55 
                 l + +a a++ ++  ++p++Wp++f+ +l+ll+s ++  +++ l +L  l +E
  EPX70693.1 106 LNKAVAYAVSLIANVDFPDEWPEVFPCVLQLLKSdNEGSINAALDVLCELIDE 158
                 556788899999**********************77999999****9999877 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.36
                 HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTTS-HHHHHTSCHHHHHHH CS
        Xpo1  80 vqkilelllqileqsqskkqsselveavLkclsswvswidiglivnnpllnllfq 134
                 v ++     ++l++ ++ +++ +l +++ +  +++vs+ di+ + ++ ll ++++
  EPX70693.1 391 VDTVRGAAVNVLSSFEQ-HTNLKLQQQIRELAAAYVSENDINWVDQEALLYTCCS 444
                 55555566667766665.4678899999999999999999999999989888886 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 1
                 HHHHHHHHHHHHHHHHTTTS-HHHHHTSCHHHHHHHHC CS
        Xpo1  99 qsselveavLkclsswvswidiglivnnpllnllfqlL 136
                 +s+ l+ + ++++ +++s  d + +v+   ++ + +l 
  EPX70693.1 490 ESTPLAIEFFQVFLNCISNADQSDLVKYAAVKGIERLC 527
                 35788889999999999999999998877776666655 PP

  == domain 4  score: -0.3 bits;  conditional E-value: 0.4
                 HHHHHHHHHHCC....................HHHHHHHHHHHHHHHHTT CS
        Xpo1  87 llqileqsqskk....................qsselveavLkclsswvs 116
                 +l+++++ ++++                     ss++  avLk+l+ +v+
  EPX70693.1 502 FLNCISNADQSDlvkyaavkgierlcsvsqvkPSSSVQPAVLKVLRDFVP 551
                 55555555555555555555555555555565778899999999999987 PP

  == domain 5  score: -1.8 bits;  conditional E-value: 1.1
                 TTHHHHHHHHHCT.HHHHH CS
        Xpo1  25 psffddllsllssspsgle 43 
                 ++ f+d++s   s +s++e
  EPX70693.1 605 EDTFEDITSEAASYESVCE 623
                 3344444444444455555 PP

  == domain 6  score: -1.5 bits;  conditional E-value: 0.9
                 H CS
        Xpo1  83 i 83 
                 +
  EPX70693.1 754 L 754
                 2 PP

>> YnfE  Uncharacterized YnfE-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.2   4.6e-05      0.12      32      69 ..     366     403 ..     362     410 .. 0.87
   2 ?   -1.9   0.1       1.7   4.3e+03      47      77 ..     447     461 ..     427     473 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 4.6e-05
        YnfE  32 qkeqlelYekqLkqesssdedfDevvdavvkcAagDls 69 
                  k q+e Ye  +++  + + ++D +vd+v + A + ls
  EPX70693.1 366 SKSQVEIYENDVNEYIINETNYDSFVDTVRGAAVNVLS 403
                 589*************************9988877664 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.7
        YnfE  47 sssdedfDevvdavvkcAagDlsleeLeevy 77 
                  +sd+ +De  + v                y
  EPX70693.1 447 AASDDTYDEYLEPV----------------Y 461
                 45556666555544................4 PP

>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.1     0.005        13      14      39 ..     130     155 ..     126     157 .. 0.90
   2 ?   -2.9   0.0       3.3   8.5e+03      17      33 ..     600     616 ..     598     617 .. 0.84
   3 ?    2.1   0.1     0.085   2.2e+02      14      37 ..     626     649 ..     621     653 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.005
                 HHHHHHHTTTSSHHHHHHHHHHHHHH CS
         Arm  14 vppLvrLLssedeevqeeAawALsNL 39 
                  p  ++LL+s++e+   +A+  L+ L
  EPX70693.1 130 FPCVLQLLKSDNEGSINAALDVLCEL 155
                 68899****************99987 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 3.3
                 HHHHTTTSSHHHHHHHH CS
         Arm  17 LvrLLssedeevqeeAa 33 
                 L  L++++ e+++ eAa
  EPX70693.1 600 LSGLIEDTFEDITSEAA 616
                 667999999*******9 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.085
                 HHHHHHHTTTSSHHHHHHHHHHHH CS
         Arm  14 vppLvrLLssedeevqeeAawALs 37 
                 +p L++ Ls++d++++ + ++ Ls
  EPX70693.1 626 MPELLQVLSHPDPNLVNVGCTLLS 649
                 699**********99877666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (993 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       635  (0.0354175); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.91u 0.38s 00:00:01.29 Elapsed: 00:00:00.58
# Mc/sec: 5125.96
//
Query:       EPX70694.1  [L=306]
Description: protein phosphatase type 2A [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.8e-35  121.7   0.1    7.8e-35  121.2   0.1    1.2  1  Metallophos    Calcineurin-like phosphoesterase
  ------ inclusion threshold ------
       0.15   12.3   0.0        0.2   11.8   0.0    1.2  1  Metallophos_2  Calcineurin-like phosphoesterase superfamily d
        0.2   12.1   0.4       0.62   10.6   0.4    1.9  1  STPPase_N      Serine-threonine protein phosphatase N-termina


Domain annotation for each model (and alignments):
>> Metallophos  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.2   0.1   1.3e-38   7.8e-35       2     201 ..      45     237 ..      44     240 .. 0.90

  Alignments for each domain:
  == domain 1  score: 121.2 bits;  conditional E-value: 1.3e-38
                  EEEEEESBTBTTCCTHHHHHHHHHHHH.HHHTTESEEEEESTSSSSSHHHHHHHHH.HHHHHHHTSEEEEEC-TTS........CHHHHHHHHHHHHH CS
  Metallophos   2 rilvigDlHlalgggqlddllkllddl.lreekpdlvllaGDlvdrgdlekellel.laalvkypipvylllGNHe........gfeeellnkygylg 89 
                  +i+v+gD+H     gq++dll++++   +++  ++++l  GD+vdrg ++ e++ l l+ +++yp+++ ll+GNHe        gf+ e+l+kyg+  
   EPX70694.1  45 PITVVGDIH-----GQFEDLLEIFRIGgPCPFTNYIFL--GDYVDRGYYSVETITLlLCLKLRYPKRITLLRGNHEsrgitqtyGFYSECLRKYGS-- 133
                  79*******.....**********8888888899****..*******66666666669*************************************9.. PP

                  HHHHHHEHHHCEEETSEEEEEETTEEEEEEEESE.CEEETHHHHHHHHHHHSCHHHHCC...HHHHHHHHHHTTCSEEEEEESSESSCSSSCSCCHHH CS
  Metallophos  90 ifsepwrsdaevfnnlplaslgsgslkvlllhGg.spellvsldklgslnleleapepg...dewlkdlekrekadwvivlgHsplyrgsgylfgdea 183
                    +++w++ ++ f++l la+ +++   ++++hGg sp +  ++d++  l++++e p++g   d+ ++d     +++ +  ++ sp   g+gy+fg+  
   EPX70694.1 134 --ANVWKQITDIFDFLTLAATIDD--SIFCVHGGlSPSI-QHIDQIVVLDRFREFPHEGamaDLVWSD-----PDPSIQEFSLSPR--GAGYSFGEVI 219
                  ..8899******************..********77777.****************************.....4444444444444..6********* PP

                  HHHHHHHTTESEEEEESS CS
  Metallophos 184 ledllkkygvdlvisGHt 201
                  + ++l +++ d+++++H+
   EPX70694.1 220 VSKFLHENNMDHILRAHQ 237
                  *****************7 PP

>> Metallophos_2  Calcineurin-like phosphoesterase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   3.4e-05       0.2       3      70 ..      46     127 ..      45     179 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.4e-05
  Metallophos_2   3 laiiSDlHsnldaleavlealkevgvdaiihaGDl...eeeepevleellela........pvlaVrGNnD.....eev.veedv 70 
                    + ++ D+H++++ l +++++   +     i++GD+   +     ++e++  l+        +++  rGN++     +++ + +++
     EPX70694.1  46 ITVVGDIHGQFEDLLEIFRIGGPCPFTNYIFLGDYvdrG---YYSVETITLLLclklrypkRITLLRGNHEsrgitQTYgFYSEC 127
                    5799******************************84331...2233333333333466899**********66665222333333 PP

>> STPPase_N  Serine-threonine protein phosphatase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.4    0.0001      0.62       2      47 ..       5      42 ..       4      42 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.0001
   STPPase_N  2 DdiIerLlevrgkpggkkvqLseaEIrqlCakareiFLsQPtLLeL 47
                D+i erL +       k++ + e  I +lC+ a+e+++++ +  +L
  EPX70694.1  5 DQILERLYN-------KQI-IAEPVIAYLCSLAKEVLIQESNVVRL 42
                555555555.......333.89999*************99887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (306 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       377  (0.0210274); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.35s 00:00:01.00 Elapsed: 00:00:00.58
# Mc/sec: 1602.78
//
Query:       EPX70695.1  [L=457]
Description: mRNA cleavage and polyadenylation specificity factor complex subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-35  121.6   0.0    5.5e-35  120.9   0.0    1.4  1  CLP1_P      mRNA cleavage and polyadenylation factor CLP1 P-l
    1.9e-33  114.5   0.0    5.3e-33  113.1   0.0    1.8  2  CLP1_N      N-terminal beta-sandwich domain of polyadenylatio
    7.9e-31  106.9   0.0    1.4e-30  106.1   0.0    1.4  1  Clp1        Pre-mRNA cleavage complex II protein Clp1
     0.0083   15.9   0.0      0.016   15.0   0.0    1.5  1  ATP_bind_1  Conserved hypothetical ATP binding protein
  ------ inclusion threshold ------
      0.037   13.8   0.0       0.16   11.7   0.0    1.9  2  AAA_24      AAA domain
      0.048   13.4   0.0      0.071   12.8   0.0    1.2  1  AAA_15      AAA ATPase domain
      0.061   12.8   0.1          1    8.8   0.0    2.2  2  SRPRB       Signal recognition particle receptor beta subunit
      0.072   13.3   0.0       0.15   12.3   0.0    1.5  1  AAA_28      AAA domain
        0.2   12.0   0.0       0.37   11.1   0.0    1.4  1  AAA_16      AAA ATPase domain
       0.22   12.1   0.1        7.8    7.0   0.1    2.8  2  AAA_18      AAA domain


Domain annotation for each model (and alignments):
>> CLP1_P  mRNA cleavage and polyadenylation factor CLP1 P-loop
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.9   0.0   3.1e-38   5.5e-35       1     188 []     114     317 ..     114     317 .. 0.95

  Alignments for each domain:
  == domain 1  score: 120.9 bits;  conditional E-value: 3.1e-38
      CLP1_P   1 GpkdsGKSTlarlLlNyalrkgrkpvyvDlDvGqseispPgtislalverpi.............dveegfsldaplvyffGdtspsdnpslylalvke 86 
                 Gpk sGK+++ ++L  yal+++r p+ vDlD+ q+++++Pg+is+    + +             ++++++  ++plvy +G  sp dnp+ly++++++
  EPX70695.1 114 GPKSSGKTSVLKILESYALKQSRHPICVDLDPSQPMVALPGSISAFHNATILdiqeatgfgtsmsTGPTHILAKSPLVYNYGLDSPLDNPKLYKSCCSR 212
                 9*******************************************98766655889999999999988999999************************** PP

      CLP1_P  87 lareveekleenkkakasgliIntpGwvkglg..aellleliealepdvvvvldqeellnelkrdlp.lskvkvvklpkspgvvqrsreerrelreeri 182
                 la +v++++ ++ +a  sg++++t+++ +      ++l ++i  +++++v+vl++e+l++ +kr+ +  s ++vvklp+s+g  +r++e   +++++ +
  EPX70695.1 213 LALAVNSRMTQSVDASVSGCLVDTCSLQENNEryQDTLHSIITDFRINIVLVLGSERLYSTMKRNYNnASWLSVVKLPSSGGCIEREPEWITRWQSRCL 311
                 ***************************986532259*******************************9999**************************** PP

      CLP1_P 183 reYFyg 188
                 ++YFyg
  EPX70695.1 312 KQYFYG 317
                 *****7 PP

>> CLP1_N  N-terminal beta-sandwich domain of polyadenylation factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.1   0.0   2.9e-36   5.3e-33       2      92 .]       7      95 ..       6      95 .. 0.97
   2 ?   -2.9   0.0       4.5   8.1e+03      55      89 ..     236     269 ..     214     271 .. 0.56

  Alignments for each domain:
  == domain 1  score: 113.1 bits;  conditional E-value: 2.9e-36
                E-TTEEEEEEE-SSS-EEEEEEEE--EETTEE--TT-EEEE-TT-EEEEEESS-EEEEEES-EEEEEEES--SHHHHHHHHHHHHHHHHHH CS
      CLP1_N  2 LekeselrfeveskeklkikllsGtaEifGtELaknkeytfskgtkfaiftwegcklevkgeaeseyvseetpmksylnlhlaLeklRqka 92
                ++k++e+rfeve+   ++i+l +G+aE fGtELa + +y+f+ ++k aiftw+gc+lev+ge+++eyv+eetpm +ylnlh+aLe+lR+ka
  EPX70695.1  7 VPKGCEWRFEVEEPG-IQIRLATGNAEYFGTELALGPPYNFE-QVKGAIFTWQGCTLEVEGEPSVEYVAEETPMCTYLNLHFALENLRKKA 95
                6899*********96.**************************.8********************************************986 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 4.5
                 -EEEEEES-EEEEEEES.--SHHHH.HHHHHHHHHHH CS
      CLP1_N  55 gcklevkgeaeseyvse.etpmksy.lnlhlaLeklR 89 
                  c+l+   e++  y+ + ++ ++++ +n+ l+L ++R
  EPX70695.1 236 TCSLQ---ENNERYQDTlHSIITDFrINIVLVLGSER 269
                 34444...22245666555555555567777776666 PP

>> Clp1  Pre-mRNA cleavage complex II protein Clp1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.1   0.0   7.9e-34   1.4e-30       1     117 []     323     457 .]     323     457 .] 0.95

  Alignments for each domain:
  == domain 1  score: 106.1 bits;  conditional E-value: 7.9e-34
                 ---EEEEEETTS-EEEEE-...------------.-...............-----TS-EEEE-.--.GGGTTEEEEEESSSS....TCCTT--EEEEE CS
        Clp1   1 LsPysitvdfddlsiyrvge..eeaapssalPigee...............ekeseetklekveeps.selqnsilavsqasakdseeevldssvlGFv 81 
                 LsP si vd ++l +yrv e  e+  +ss+lPig e               + + + + le++++++ + lqnsila+s+ s++++e++++ds++lG+v
  EPX70695.1 323 LSPLSIIVDSTQLVVYRVLEasESGPKSSVLPIGFEeesgqsddkgnymslALSGKGQYLERITTEAmTILQNSILAISSVSEDENETAIIDSCILGYV 421
                 8****************9988788899*******889*********999987777789999998877899***************************** PP

                 EEEEEETTTTEEEEEESSSS.-S-SEEEEEEEE--- CS
        Clp1  82 yVtevdeekkkltvLsPvpgrlpskalilgslkwpe 117
                 +Vt+vd+ k+++t+LsPvp rlps+ali+g++kw+e
  EPX70695.1 422 FVTDVDDVKNRMTLLSPVPDRLPSNALIMGTCKWQE 457
                 **********************************98 PP

>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   9.1e-06     0.016       2      40 ..     113     151 ..     112     178 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 9.1e-06
  ATP_bind_1   2 vGpaGsGKttfvgalseilelrgrsvavvNLDPAaeelp 40 
                 +Gp +sGKt+  + l +++ ++ r++ +v LDP    ++
  EPX70695.1 113 IGPKSSGKTSVLKILESYALKQSRHPICVDLDPSQPMVA 151
                 8********************************976665 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   8.9e-05      0.16       2      33 ..     107     145 ..     106     159 .. 0.90
   2 ?   -0.9   0.0      0.66   1.2e+03     124     172 ..     351     397 ..     337     415 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 8.9e-05
      AAA_24   2 klkiliyGpsgiGKTtlakel.......gpkplfidtek 33 
                 + +++++Gp  +GKT+++k l         +p+++d++ 
  EPX70695.1 107 GPRVCLIGPKSSGKTSVLKILesyalkqSRHPICVDLDP 145
                 679****************99999999999999999986 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.66
      AAA_24 124 nvifiahektrkdedpegeakytrlepklgkktanelkeevDlvlranl 172
                  v  i+ e++  + d++g+  y++l+++ + +  + +++e+ ++l+ ++
  EPX70695.1 351 SVLPIGFEEESGQSDDKGN--YMSLALSGKGQYLERITTEAMTILQNSI 397
                 5566666777777777666..9999999999999999999988887665 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   3.9e-05     0.071       9      45 ..      89     129 ..      85     173 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3.9e-05
      AAA_15   9 kNFRslkdveidlsee....ltvliGkNnsGKSsilealdl 45 
                 +N R+  +   +++++      +liG+ +sGK+s+l++l+ 
  EPX70695.1  89 ENLRKKAEENASMDPSisgpRVCLIGPKSSGKTSVLKILES 129
                 6666666666666666555567*****************75 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.0   0.00057         1       4      30 ..     108     134 ..     105     142 .. 0.85
   2 ?    1.5   0.0     0.098   1.8e+02      12      55 ..     374     414 ..     370     416 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00057
                 -EEEEE-STTSSHHHHHHHHHHSS--- CS
       SRPRB   4 pavllvGlsdsGKTslftrLttdsvkk 30 
                 p+v l+G++ sGKTs+++ L + + k+
  EPX70695.1 108 PRVCLIGPKSSGKTSVLKILESYALKQ 134
                 7899*************9998776665 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.098
                 TTSSHHHHHHHHHHSS---B---SS-EEETTG...GGTT-SEEE CS
       SRPRB  12 sdsGKTslftrLttdsvkktvtSqessaalkvksekgskltliD 55 
                   sGK   ++r+tt++++  + S+ + ++    se+++++++iD
  EPX70695.1 374 ALSGKGQYLERITTEAMTILQNSILAISSV---SEDENETAIID 414
                 569***********9999888888544433...45778888887 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   8.3e-05      0.15       1      22 [.     109     130 ..     109     141 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 8.3e-05
      AAA_28   1 kivitGgestGKTtlleaLaar 22 
                 +++++G+ s+GKT++l+ L++ 
  EPX70695.1 109 RVCLIGPKSSGKTSVLKILESY 130
                 79***************99864 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00021      0.37      24      51 ..     107     134 ..      87     189 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00021
      AAA_16  24 pelvllsGesGvGKsslvrellralekd 51 
                 ++ v l+G++ +GK+s+++ l  ++ k+
  EPX70695.1 107 GPRVCLIGPKSSGKTSVLKILESYALKQ 134
                 27788*************9998877777 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.1    0.0044       7.8       1      20 [.     110     129 ..     110     271 .. 0.87
   2 ?    2.0   0.0      0.16   2.9e+02      50      92 ..     383     426 ..     360     437 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0044
      AAA_18   1 IlltGtpGvGKttlakeLsk 20 
                 ++l G+  +GKt++ k L++
  EPX70695.1 110 VCLIGPKSSGKTSVLKILES 129
                 79***************954 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.16
      AAA_18  50 krldedkldklldaleenss.aleegknlvidghlaeleseaak 92 
                 +r+ ++ +  l++ + ++ss +++e+++ +id+++  +++  ++
  EPX70695.1 383 ERITTEAMTILQNSILAISSvSEDENETAIIDSCILGYVFVTDV 426
                 46677777777777777777888889999*****9887766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (457 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       355  (0.0198003); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.59u 0.33s 00:00:00.92 Elapsed: 00:00:00.50
# Mc/sec: 2765.57
//
Query:       EPX70696.1  [L=60]
Description: hypothetical protein SOCG_04260 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (60 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       302  (0.0168442); expected 358.6 (0.02)
Passed bias filter:                      158  (0.00881254); expected 358.6 (0.02)
Passed Vit filter:                         5  (0.000278878); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.29s 00:00:00.62 Elapsed: 00:00:00.45
# Mc/sec: 403.69
//
Query:       EPX70697.1  [L=533]
Description: scaffold protein Scd2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-28   97.9   0.0    1.1e-14   53.7   0.0    2.5  2  SH3_1     SH3 domain
    1.3e-16   60.0   0.0    1.3e-10   40.8   0.0    2.4  2  SH3_2     Variant SH3 domain
    2.1e-14   53.1   0.0    7.3e-09   35.3   0.0    2.6  2  SH3_9     Variant SH3 domain
    2.4e-11   43.6   0.0      6e-11   42.3   0.0    1.7  1  PX        PX domain
  ------ inclusion threshold ------
      0.014   15.3   0.0      0.032   14.2   0.0    1.5  1  PB1       PB1 domain
      0.039   11.8   0.0      0.054   11.4   0.0    1.1  1  DUF5396   Family of unknown function (DUF5396)
      0.053   13.6   0.0       0.22   11.6   0.0    2.0  2  SL4P      Uncharacterized Strongylid L4 protein


Domain annotation for each model (and alignments):
>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.7   0.0   4.3e-18   1.1e-14       1      48 []      30      78 ..      30      78 .. 0.98
   2 !   41.7   0.0   2.4e-14   6.1e-11       2      47 ..     131     177 ..     130     178 .. 0.96

  Alignments for each domain:
  == domain 1  score: 53.7 bits;  conditional E-value: 4.3e-18
                EESSSBEXSSTTBXEBSTTEEEEEEEECSS.SEEEEEETTSTEEEEEEG CS
       SH3_1  1 iAlYDYeaeesdELsfkkGDviivleksed.gWwkgrlkgtgkeGliPs 48
                +AlYDY+a++++E+sf+kGD ++v+ +++d  W+++ +   g  G++P+
  EPX70697.1 30 RALYDYTARKASEISFTKGDFFHVIGRENDeRWYEVCNPAAGTHGYVPV 78
                7***********************************************5 PP

  == domain 2  score: 41.7 bits;  conditional E-value: 2.4e-14
                 ESSSBEXSSTTBXEBSTTEEEEEEEECSSSEEEEEETTS.TEEEEEE CS
       SH3_1   2 AlYDYeaeesdELsfkkGDviivleksedgWwkgrlkgt.gkeGliP 47 
                 + +D+ ae++dEL+ k G++ii++++s+++W+ ++ +g+ g  GliP
  EPX70697.1 131 VQFDFVAERPDELDAKAGETIIIIARSNHEWLVAKPIGRlGGPGLIP 177
                 78**************************************99****9 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.8   0.0   4.9e-14   1.3e-10       2      56 ..      29      83 ..      28      84 .. 0.92
   2 !   16.9   0.0   1.5e-06    0.0038       1      53 [.     128     180 ..     128     183 .. 0.74

  Alignments for each domain:
  == domain 1  score: 40.8 bits;  conditional E-value: 4.9e-14
                EEESS-B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEE..CCCEEEEEGCGEEE CS
       SH3_2  2 vraiedyvgedkseLsfkkGdvikvlslgskdsdgwwegev..gGrvGlfPsslvee 56
                vra+ dy++ + se+sf+kGd+++v+  g+++++ w+e+ +   G+ G++P s+ ee
  EPX70697.1 29 VRALYDYTARKASEISFTKGDFFHVI--GRENDERWYEVCNpaAGTHGYVPVSHFEE 83
                89************************..888888*****99999*******998777 PP

  == domain 2  score: 16.9 bits;  conditional E-value: 1.5e-06
                 EEEESS-B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEE.CCCE...EEEEGCG CS
       SH3_2   1 yvraiedyvgedkseLsfkkGdvikvlslgskdsdgwwegev.gGrv...GlfPssl 53 
                 ++++ +d+v+e ++eL  k+G++i ++    +++++w  +++  Gr    Gl+P ++
  EPX70697.1 128 FGVVQFDFVAERPDELDAKAGETIIII---ARSNHEWL-VAKpIGRLggpGLIPLTF 180
                 589************************...67777774.333334433348888665 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.0   2.9e-12   7.3e-09       1      46 [.      31      79 ..      31      80 .. 0.95
   2 !   15.2   0.0   5.8e-06     0.015       2      48 ..     132     181 ..     131     182 .. 0.88

  Alignments for each domain:
  == domain 1  score: 35.3 bits;  conditional E-value: 2.9e-12
       SH3_9  1 AlypyepreddeLsLqrGDvitvi.eesedgWlegsl..tGrtGlvPan 46
                Aly+y++r++ e+s+ +GD++ vi +e ++ W+e+ +   G++G+vP++
  EPX70697.1 31 ALYDYTARKASEISFTKGDFFHVIgRENDERWYEVCNpaAGTHGYVPVS 79
                8***********************77788*******999********86 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 5.8e-06
       SH3_9   2 lypyepreddeLsLqrGDvitvieesedgWlegs...ltGrtGlvPanyv 48 
                  +++++  +deL   +G++i++i +s+  Wl ++   + G  Gl P +++
  EPX70697.1 132 QFDFVAERPDELDAKAGETIIIIARSNHEWLVAKpigRLGGPGLIPLTFI 181
                 69*********************999*******97666788888887777 PP

>> PX  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.3   0.0   2.3e-14     6e-11      16     110 ..     308     405 ..     295     408 .. 0.92

  Alignments for each domain:
  == domain 1  score: 42.3 bits;  conditional E-value: 2.3e-14
                 TSSEEEEEEEEEETTSSSEEEEEEEHHHHHHHHHHHHHHHT........TSTSTSSSTSGSSSSSCTTSHHHHHHHHHHHHHHHHHHHTSCHHHH.SHH CS
          PX  16 skkhsyylyevelktgakewtvkRrYsdFeeLhskLlrkfp........rvkiPplPkkvlfgsvrkkdeefiekrrkgLeeyLqrllnhpelrn.sev 105
                   ++ +yl++  +++g +++++ R Y+dF+ L+  Ll+ fp        r++iP++P++v+ ++     e +  +r  +L++y+++l++ p     ++ 
  EPX70697.1 308 HNDQFWYLVRAVMSDG-RHRNLCRYYEDFYYLQLTLLDSFPteagrgqgRRIIPYMPGPVDDVN-----ELVSSQRALDLDVYVKELCRLPSHLLeNDY 400
                 567899*********9.*******************************************9987.....**********************99988999 PP

                 HHHHH CS
          PX 106 lteFL 110
                 l +F+
  EPX70697.1 401 LIKFF 405
                 99998 PP

>> PB1  PB1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   1.2e-05     0.032       3      68 ..     460     523 ..     458     528 .. 0.94

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 1.2e-05
                 EEEEEETTEEEEEEEEGSSS-HHHHHHHHHHHHTSTCCSEEEEEEETTS.SEEEESSHHHHHHHHHH CS
         PB1   3 dlKlrygggirrelsvssnisfeeLrakvekrfklsdedvklkYpdedg.dlVtitsDeDLeealee 68 
                 ++K+r g+++   l+++s++++e +++k++ +++ +    kl Y+d+ + ++++  + +DL+ a+++
  EPX70697.1 460 KVKIRSGDETFA-LRMASDTPYEAFVEKLKAKLGFD--WEKLVYRDDSKnEFLPMCNADDLRIAFSQ 523
                 799999999999.**********************5..889***********************997 PP

>> DUF5396  Family of unknown function (DUF5396)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   2.1e-05     0.054     647     706 ..     190     249 ..     182     272 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 2.1e-05
     DUF5396 647 qviedlsdgllkvtlvqrlattpsasvwfnkqssplgfsywspdyngvgtwleadttiqs 706
                  vi+++s+++l+ + ++r+     a++ + k s plg  + s + n   t  e+ +t+  
  EPX70697.1 190 AVIKHISEAILRTSCIPRVEDWKRAAIDYKKSSIPLGNFHTSMEDNVSSTGFESKSTLTD 249
                 69********************************************99999999999854 PP

>> SL4P  Uncharacterized Strongylid L4 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       1.6     4e+03      39      83 ..     220     265 ..     218     270 .. 0.71
   2 ?   11.6   0.0   8.5e-05      0.22      30      72 ..     480     524 ..     476     532 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 1.6
        SL4P  39 elgipldevywvdedgd.rilirnaddLleavkdnavvklyvrdea 83 
                 + +ipl++ +   ed+   +  +   +L  av++++ +++ +++ +
  EPX70697.1 220 KSSIPLGNFHTSMEDNVsSTGFESKSTLTDAVQSSPRASISTSQIS 265
                 5667777777666555547778888899999999999998877655 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 8.5e-05
        SL4P  30 fekfkkklk.elgipldevywvd.edgdrilirnaddLleavkdn 72 
                 +e+f +klk +lg++ +++ + d ++++ + + naddL  a +++
  EPX70697.1 480 YEAFVEKLKaKLGFDWEKLVYRDdSKNEFLPMCNADDLRIAFSQK 524
                 99******768******99888857777999*******9887755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (533 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       538  (0.0300073); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.56u 0.31s 00:00:00.87 Elapsed: 00:00:00.45
# Mc/sec: 3529.72
//
Query:       EPX70698.1  [L=490]
Description: DUF2009 protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   7.6e-191  635.1   0.1   8.7e-191  634.9   0.1    1.0  1  DUF2009   Protein of unknown function (DUF2009)


Domain annotation for each model (and alignments):
>> DUF2009  Protein of unknown function (DUF2009)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  634.9   0.1  4.8e-195  8.7e-191       1     456 []      36     489 ..      36     489 .. 1.00

  Alignments for each domain:
  == domain 1  score: 634.9 bits;  conditional E-value: 4.8e-195
     DUF2009   1 rakyiplRLteeeRkllrlleaalkvseYtdkvDilsvkskekriveqlkelcsilsglvvasdlkkgqelleekefaenaeflqkvfEigRRyKilnP 99 
                 r+k+ip+RL+++eRkll+ll aal+v +Ytd+vD+l+++sk+kr+++qlk ++s+l+g+++a d+k+gqelle+k+f++ a f+q+vfEigRRyK+lnP
  EPX70698.1  36 RSKVIPVRLEYQERKLLHLLVAALDVCDYTDTVDTLRFSSKAKRTAQQLKGITSVLAGIMIAYDYKAGQELLESKDFEKYAGFFQDVFEIGRRYKVLNP 134
                 689************************************************************************************************ PP

     DUF2009 100 ekmreeygkliyllqDsvkpevkealefklvkpiktvesvleekealelledklielataeisaekksreeiqkeikekeeaieklakkysskklskee 198
                 +++ ++ygkl+y++qDs+ pev+e+l+f+l+kpi tv+++l++++al++led+ i++at ei+a ++sr++iqk+ik+ke+++e++ak+++s++++k++
  EPX70698.1 135 NRLGSTYGKLMYFVQDSMCPEVQENLGFNLFKPILTVYEYLKDRKALKVLEDPYITNATIEIVAGGRSRSAIQKDIKTKERSVETIAKRHASSSITKDQ 233
                 *************************************************************************************************** PP

     DUF2009 199 ieqvlysiednnafleanrepvekllkllekffepekeeeklslaikaGkdGarlthdHekqyqyvlqsLtlWkeilkemfklWllaeedllseeesYe 297
                 i+ +lys++d+n++l+ nr+pv kl+++++++f+p++ ++++slai+a  +G+rl+h+H kqy+yvlqsL+lW  i+ e+f+lW+l++ +l++++ +Ye
  EPX70698.1 234 IRWCLYSLADSNSYLRFNRDPVAKLIDMVKQNFSPDTVDDEFSLAIDA-ANGSRLQHNHYKQYHYVLQSLNLWLLIMGEIFSLWALSDLELTNPDVQYE 331
                 ***********************************************9.9************************************************* PP

     DUF2009 298 lantgqGlnRvqkapkvskamekilsetqkklgeWvGssvvHlGDrnvPnalvFiDKYtqvprilsPivktleeleklaedpelkeyieeefgsveelk 396
                 l+++ qG++R+q++p+++ ame+ils++q++ g+W+G s++HlGD++vPnal+FiDKY+qvpril+P+v  +eel++l+ d++l +yie++fg+ e lk
  EPX70698.1 332 LVDNNQGVHRIQACPNIRIAMERILSRAQRQAGSWIGDSTIHLGDTAVPNALLFIDKYMQVPRILTPLVLFFEELDSLH-DQALLRYIETAFGGKEYLK 429
                 ******************************************************************************9.999**************** PP

     DUF2009 397 ktiLsdffrhaFdGsGadnffdaGsCiDGrltsawnwcskiekkkyykiflltgftgFdG 456
                 k++L+df+r++FdGsGadn+fdaGsCiDGrltsawnw+++i++k+yy+++l+tgf +F+G
  EPX70698.1 430 KMVLTDFMRFGFDGSGADNWFDAGSCIDGRLTSAWNWANSIHTKDYYRVLLMTGFLSFNG 489
                 ***********************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (490 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       524  (0.0292264); expected 358.6 (0.02)
Passed bias filter:                      451  (0.0251548); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.45
# Mc/sec: 3295.63
//
Query:       EPX70699.1  [L=636]
Description: hypothetical protein SOCG_04257 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (636 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       612  (0.0341346); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 4282.59
//
Query:       EPX70700.1  [L=511]
Description: tubulin specific chaperone cofactor E [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      8e-10   38.5  13.6     0.0018   17.8   1.3    3.3  3  LRR_9     Leucine-rich repeat
    1.7e-06   27.7  24.5     0.0012   18.5   3.9    4.3  4  LRR_8     Leucine rich repeat
    4.3e-05   23.8  34.3     0.0082   16.5   0.7    6.7  8  LRR_4     Leucine Rich repeats (2 copies)
     0.0081   16.1   5.5         29    5.1   0.0    6.0  5  LRR_6     Leucine Rich repeat


Domain annotation for each model (and alignments):
>> LRR_9  Leucine-rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.4   4.1e-06     0.018      53     110 ..     107     164 ..      92     170 .. 0.81
   2 !   14.5   0.9   4.2e-06     0.019      86     154 ..     166     234 ..     162     243 .. 0.91
   3 !   17.8   1.3   4.1e-07    0.0018      60     165 ..     260     366 ..     236     377 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 4.1e-06
       LRR_9  53 dirkldgfPllkrlktlllnnnrivriaegle..evlPnleelvltnnelqeladldPla 110
                 di++l+    ++rlk+++l+n +i  + +g++   +lP++++l l++n + +++d+  l 
  EPX70700.1 107 DIKRLQA--DFQRLKIVILENSQISSVDDGVQigSILPEIQKLDLSSNLFSSMNDVLLLC 164
                 6777764..589****************98643389******************987665 PP

  == domain 2  score: 14.5 bits;  conditional E-value: 4.2e-06
       LRR_9  86 vlPnleelvltnnelqeladldPlaslkklellsllknpvtnkkeyrlyviyklkqlrlldfrkvklke 154
                  l +l+el+l +n+  +l+dl    ++++++ l l ++ + +k+  r   i+ + +   ld++ +klk+
  EPX70700.1 166 QLSKLSELILDKNKYLSLSDLTHTFTIRQVSRLFLRDCNIESKELSRIQNIFPFLKEFHLDYNEIKLKQ 234
                 6889*********************************************9999877777*******997 PP

  == domain 3  score: 17.8 bits;  conditional E-value: 4.1e-07
       LRR_9  60 fPllkrlktlllnnnrivriaegleevlPnleelvltnnelqeladldPlaslkklellsllknpvtnkk.eyrlyviyklkqlrlldfrkvklkeree 157
                    ++r k l ++   i  ++    e +  l+ l +++n + +  +++ l +lk+l+ l +  + + +k+ e r +vi +l++l  l+   + ++ere+
  EPX70700.1 260 SSVFERTKWLNISFCNISDLKVLPLEKMQDLSFLDISGNDISSWDQINLLQKLKNLRELRVSLSKLHDKTdESRMFVIARLPTLMKLNDVFISKNERED 358
                 456777777777777777766666677888999999***********************99888887765268***************99********* PP

       LRR_9 158 aeklfksk 165
                 +e +f+s 
  EPX70700.1 359 SEIYFSSF 366
                 ****9985 PP

>> LRR_8  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.78   3.5e+03       3      11 ..      89      97 ..      86     102 .. 0.66
   2 !   18.5   3.9   2.7e-07    0.0012       2      60 ..     117     179 ..     116     185 .. 0.91
   3 !    7.4   0.8   0.00083       3.7       2      60 ..     194     250 ..     193     252 .. 0.74
   4 !   13.2   3.0   1.3e-05     0.056       4      57 ..     267     321 ..     264     325 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.78
                -SEEE-TTS CS
       LRR_8  3 LtsLdLsnN 11
                L+sLdL+n 
  EPX70700.1 89 LSSLDLDNG 97
                677777765 PP

  == domain 2  score: 18.5 bits;  conditional E-value: 2.7e-07
                 T-SEEE-TTS--SEE-TTSSTT..-TT--EEE--SS---GGGGGGG..TT--S-.EEE--SS- CS
       LRR_8   2 nLtsLdLsnNrltslddeaFkg..lsnLkvLdLsnNllttlspgaf..sgLpsLrsLdLsgNr 60 
                 +L++++L n++++s+dd++  g  l+  + LdLs+Nl ++++   +  s+L++L +L L+ N+
  EPX70700.1 117 RLKIVILENSQISSVDDGVQIGsiLPEIQKLDLSSNLFSSMNDVLLlcSQLSKLSELILDKNK 179
                 89****************999989*****************9886433899********9996 PP

  == domain 3  score: 7.4 bits;  conditional E-value: 0.00083
                 T-SEEE-TTS--SEE-TTSSTT.-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS- CS
       LRR_8   2 nLtsLdLsnNrltslddeaFkg.lsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNr 60 
                 ++++L L++ +++s + +  ++ ++ Lk+++L +N+++        +++s++ + Ls+N+
  EPX70700.1 194 QVSRLFLRDCNIESKELSRIQNiFPFLKEFHLDYNEIKLKQ---STCFKSIEVISLSNNN 250
                 56778888888888888888888888999999999888885...5555556777888875 PP

  == domain 4  score: 13.2 bits;  conditional E-value: 1.3e-05
                 SEEE-TTS--SEE-TTSSTT-TT--EEE--SS---GGGG.GGGTT--S-.EEE-- CS
       LRR_8   4 tsLdLsnNrltslddeaFkglsnLkvLdLsnNllttlsp.gafsgLpsLrsLdLs 57 
                 + L++s+ ++++l+    ++++ L  Ld+s N +++ ++ + ++ L++Lr+L +s
  EPX70700.1 267 KWLNISFCNISDLKVLPLEKMQDLSFLDISGNDISSWDQiNLLQKLKNLRELRVS 321
                 79**********************************5543799********9876 PP

>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.43   1.9e+03      23      33 ..      87      96 ..      75     107 .. 0.73
   2 ?    2.2   0.2     0.059   2.7e+02      13      40 ..     105     132 ..      87     136 .. 0.62
   3 !   11.8   0.7   5.9e-05      0.26       1      37 [.     116     155 ..     116     162 .. 0.86
   4 !    7.1   5.2    0.0017       7.5       2      43 ..     143     187 ..     142     188 .. 0.81
   5 ?    4.3   0.1     0.013        59       6      36 ..     198     230 ..     195     235 .. 0.79
   6 !    8.8   0.7   0.00048       2.2       3      36 ..     220     252 ..     218     260 .. 0.86
   7 !   16.5   0.7   1.8e-06    0.0082       6      41 ..     269     302 ..     267     305 .. 0.90
   8 !   14.7   2.2   6.9e-06     0.031       4      30 ..     291     320 ..     290     328 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.43
                TT--EEE-.-S CS
       LRR_4 23 pnLkeLdLsgN 33
                p L +LdL +N
  EPX70700.1 87 PLLSSLDL-DN 96
                67999999.54 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.059
                 --E-S-HHH.-TT--EEE-.-S-----GG CS
       LRR_4  13 ltdipllek.lpnLkeLdLsgNnlitdld 40 
                  +di  l+  +  Lk + L +N++i+++d
  EPX70700.1 105 FQDIKRLQAdFQRLKIVIL-ENSQISSVD 132
                 4444446644888888877.888888886 PP

  == domain 3  score: 11.8 bits;  conditional E-value: 5.9e-05
                 SS--EEE--SS---E-S-...HHH.-TT--EEE-.-S---- CS
       LRR_4   1 pnLevLdLsnNqltdipl...lek.lpnLkeLdLsgNnlit 37 
                 ++L+++ L n q+++++    +++ lp  ++LdLs+N l +
  EPX70700.1 116 QRLKIVILENSQISSVDDgvqIGSiLPEIQKLDLSSN-LFS 155
                 58999****99*******9877799*********999.555 PP

  == domain 4  score: 7.1 bits;  conditional E-value: 0.0017
                 S--EEE--SS---E-S-....HHH-TT--EEE-.-S-----GGGGX CS
       LRR_4   2 nLevLdLsnNqltdipl....leklpnLkeLdLsgNnlitdldeLk 43 
                   ++LdLs+N  ++ +     +++l +L eL L  N ++ +l++L 
  EPX70700.1 143 EIQKLDLSSNLFSSMNDvlllCSQLSKLSELILDKNKYL-SLSDLT 187
                 679********9988888753336*******99889888.999885 PP

  == domain 5  score: 4.3 bits;  conditional E-value: 0.013
                 EE--SS---E-S-..HHH.-TT--EEE-.-S--- CS
       LRR_4   6 LdLsnNqltdipl..lek.lpnLkeLdLsgNnli 36 
                 L L+++++ + +l  +++ +p Lke++L  N  i
  EPX70700.1 198 LFLRDCNIESKELsrIQNiFPFLKEFHLDYN-EI 230
                 8999999998777555599*********777.44 PP

  == domain 6  score: 8.8 bits;  conditional E-value: 0.00048
                 --EEE--SS---E-S-HHH-TT--EEE-.-S--- CS
       LRR_4   3 LevLdLsnNqltdiplleklpnLkeLdLsgNnli 36 
                 L++ +L  N ++ +     +++ ++++Ls+Nn +
  EPX70700.1 220 LKEFHLDYNEIK-LKQSTCFKSIEVISLSNNNEL 252
                 8899999999**.889999***********9987 PP

  == domain 7  score: 16.5 bits;  conditional E-value: 1.8e-06
                 EE--SS---E-S-..HHH-TT--EEE-.-S-----GGG CS
       LRR_4   6 LdLsnNqltdipl..leklpnLkeLdLsgNnlitdlde 41 
                 L++s ++++d+    lek+ +L  Ld+sgN    d+++
  EPX70700.1 269 LNISFCNISDLKVlpLEKMQDLSFLDISGN----DISS 302
                 99***********88789************....9986 PP

  == domain 8  score: 14.7 bits;  conditional E-value: 6.9e-06
                 -EEE--SS---E-S-...HHH-TT--EEE- CS
       LRR_4   4 evLdLsnNqltdipl...leklpnLkeLdL 30 
                  +Ld+s+N +++++    l+kl+nL+eL +
  EPX70700.1 291 SFLDISGNDISSWDQinlLQKLKNLRELRV 320
                 58*************665558*******97 PP

>> LRR_6  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0     0.049   2.2e+02       6      15 ..     145     154 ..     142     156 .. 0.83
   2 ?   -0.2   0.0      0.32   1.4e+03       4      15 ..     219     230 ..     218     232 .. 0.88
   3 ?    4.1   0.2     0.013        59       8      17 ..     269     278 ..     267     279 .. 0.95
   4 !    5.1   0.0    0.0065        29       5      16 ..     290     301 ..     286     302 .. 0.83
   5 ?    0.5   0.1      0.19   8.5e+02       3      17 ..     313     327 ..     311     328 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.049
       LRR_6   6 teLdLsgNdI 15 
                 ++LdLs+N +
  EPX70700.1 145 QKLDLSSNLF 154
                 78******76 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.32
       LRR_6   4 hLteLdLsgNdI 15 
                  L+e +L +N+I
  EPX70700.1 219 FLKEFHLDYNEI 230
                 69********99 PP

  == domain 3  score: 4.1 bits;  conditional E-value: 0.013
       LRR_6   8 LdLsgNdIgD 17 
                 L++s+++I+D
  EPX70700.1 269 LNISFCNISD 278
                 9*******99 PP

  == domain 4  score: 5.1 bits;  conditional E-value: 0.0065
       LRR_6   5 LteLdLsgNdIg 16 
                 L  Ld+sgNdI+
  EPX70700.1 290 LSFLDISGNDIS 301
                 667*******97 PP

  == domain 5  score: 0.5 bits;  conditional E-value: 0.19
       LRR_6   3 thLteLdLsgNdIgD 17 
                  +L+eL +s  ++ D
  EPX70700.1 313 KNLRELRVSLSKLHD 327
                 58*******998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (511 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       697  (0.0388756); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 3636.03
//
Query:       EPX70701.1  [L=666]
Description: TOR signaling pathway transcriptional corepressor Crf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-21   76.6   2.9    7.7e-21   74.6   0.0    3.1  2  CRF1      Transcription factor CRF1


Domain annotation for each model (and alignments):
>> CRF1  Transcription factor CRF1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   1.3     0.091   1.6e+03      60     111 ..     184     233 ..     120     235 .. 0.68
   2 !   74.6   0.0   4.3e-25   7.7e-21       1     111 [.     297     516 ..     297     535 .. 0.79

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.091
        CRF1  60 tkSLqekdkedactkgentanngagaqtlnetse........sdkdelsLddlLntSeLd 111
                 + SL++++++++ t  e+ +             +        +d+de++ +dl+  S +d
  EPX70701.1 184 SASLMSSSRKESGTYAEKDTIVS----------DtaesfvtsEDEDEVAEEDLVSASWVD 233
                 34444444444444443333333..........123333333578888888888877665 PP

  == domain 2  score: 74.6 bits;  conditional E-value: 4.3e-25
        CRF1   1 destDedetL..........................................................................Ptplelsaelakeka 25 
                 d+s+De++ +                                                                          P+p +   el+++k 
  EPX70701.1 297 DDSSDELDPVnrnsrsqayrrhsfstsrpqeddgdttdeevpqlrepklgrsvslqetpfnssamldplapafsasplskissfPNPVDAGLELSQSKP 395
                 677777777777777777777777777777777777777777777777777777777777777777777777777777777777777666666666666 PP

        CRF1  26 telvssanis........................................lkPPvlGtWakednkpfgiiDGlstkSLqekdkedactkgentanngag 84 
                 t+ + +++ s                                        +kPPvlGtW +e+n+++g iDG++++SL  +dk++a++kg+ +++ ++ 
  EPX70701.1 396 TSPIETSVHSenpssdgpvlasfadsspaimlesnsvpsfaldpklnfsqPKPPVLGTWDREPNHLVGFIDGKHSHSL-YEDKFNASKKGDVETTIPT- 492
                 65555555556666788888888888899999999999999999999999****************************.788**********999888. PP

        CRF1  85 aqtlnetsesdkdelsLddlLntSeLd 111
                  q+ n++s+  ++e+sLdd+L+tS+L+
  EPX70701.1 493 -QSSNKASN--TEEPSLDDILDTSLLQ 516
                 .44444444..78*************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (666 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1013  (0.0565006); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.29s 00:00:00.90 Elapsed: 00:00:00.47
# Mc/sec: 4288.19
//
Query:       EPX70702.1  [L=440]
Description: GDP dissociation inhibitor Gdi1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
     7e-234  776.1   0.1     8e-234  775.9   0.1    1.0  1  GDI            GDP dissociation inhibitor
    6.1e-06   25.8   0.0    8.1e-06   25.4   0.0    1.1  1  Amino_oxidase  Flavin containing amine oxidoreductase


Domain annotation for each model (and alignments):
>> GDI  GDP dissociation inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  775.9   0.1  8.9e-238    8e-234       1     435 [.       1     435 [.       1     436 [. 1.00

  Alignments for each domain:
  == domain 1  score: 775.9 bits;  conditional E-value: 8.9e-238
                 XXXEECEEEE--SHHHHHHHHHHHHTT--EEEE-SSSSSCGGG-EE-HHHHHHHH-TTHHHHHHH--GGG--EESS--BEETTSHHHHHHHHTTGGGCS CS
         GDI   1 mdeeydvivlGtGlkecilsGllsvdgkkvlhldrndyyGgesasltleqlyerfkleekpeeklGkdrdwnvdlipkfllanGelvkiliktdvtryl 99 
                 m+eeydvivlGtGl+ecilsGlls+dgkkvlh+drndyyG++sasl+l+qly  f++ e+++e+lG+drdw+vdl+pkfl+anG+l++il++tdvtry+
  EPX70702.1   1 MEEEYDVIVLGTGLTECILSGLLSIDGKKVLHIDRNDYYGADSASLNLTQLYGMFRQGEERPESLGRDRDWCVDLVPKFLMANGDLTNILVYTDVTRYI 99 
                 99************************************************************************************************* PP

                 -EEE-SEEEEEETCEEEE--SSHHHHHC-TTS-HHHHHHHHHHHHHHHH-BTTBGGGSTT--TTTSBHHHHHHHCT--HHHHHHHHHHTS--SSSGGGG CS
         GDI 100 efkaveGsyvykegkiakvpanelealaspllglfekrrakkfleyvseyeeddpktyedldlkkatmkevykkfdlsedtkdfiGhalalyrdddylk 198
                 efk+++Gsyvy++g+iakvp+ne+eal+spl++lfekrrakkfle+vs+y+e+dp+t++d++l++++m+ vykkf+l++ t+dfiGha+aly+d++y+k
  EPX70702.1 100 EFKQISGSYVYRDGRIAKVPGNEMEALKSPLMSLFEKRRAKKFLEWVSNYREEDPSTHKDINLDRDSMETVYKKFGLQSGTQDFIGHAMALYLDESYIK 198
                 *************************************************************************************************** PP

                 SBCHHHHHHHHHHHHHHCCCSS-SEEEETT-TTHHHHHHHHHHHHTT-EEETS--ECEEEE-TTS-EEEEEETTEEEEECEEEE-GGG-CCCEEEEEEE CS
         GDI 199 qpaletleriklyaeslarygkspylyplyGlGelpqgfarlsaiyGGtymlnkpvdevvldedgkvvGvkseeevakakkvicdpsylpekvrkvgkv 297
                 +pa+et +ri+lya+s+a++gkspy+yp+yGlGelpqgfarlsaiyGGtyml +pvd + +d +g++vGv+s+e+vakak+v++dpsy++ekvr++g++
  EPX70702.1 199 KPARETRDRILLYASSMAKFGKSPYIYPMYGLGELPQGFARLSAIYGGTYMLGQPVDAIEYDGNGVAVGVRSGEQVAKAKQVVGDPSYFREKVRSIGRL 297
                 *************************************************************************************************** PP

                 EEEEEEESS--TTSTT-SSEEEEE-GGGCTSSS-EEEEEEEGGGTSS-TT-EEEEEEEE--SS-HHHHTHHHHHTT-SECEEEEEEEEEEEESSSSTTT CS
         GDI 298 iraicilshpipntddadsvqiiipqkqlgrksdiyvalvssahnvaakgkylaivsttvetenpevelepalellgpieekfvkisdlyepvedgskd 396
                 +raicil+hpipntd+ dsvqiiipq+q++rk+diy+a++ss+hnv++kg+ylai+st+vet+np +e++p+l+llgp+ e+f ++++lyep+edg+kd
  EPX70702.1 298 VRAICILDHPIPNTDNLDSVQIIIPQNQVKRKHDIYIACISSVHNVCPKGYYLAIISTIVETANPLSEIAPGLKLLGPVVESFSRVQELYEPMEDGTKD 396
                 *************************************************************************************************** PP

                 SEEE-----S-SBSHHHHHHHHHHHHHHHSS-------- CS
         GDI 397 nifisksydatshfettvedvkdiykrltGkkldlkeke 435
                 +++i+ks+datshfet+++dv++iykr+tG++l+lk++e
  EPX70702.1 397 QCYITKSVDATSHFETMARDVRNIYKRMTGTDLVLKKRE 435
                 ***********************************9976 PP

>> Amino_oxidase  Flavin containing amine oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.0     9e-10   8.1e-06     117     257 ..     126     281 ..      86     282 .. 0.65

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 9e-10
                    HHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHH..HHHHHHHHHHHHHHHHHHCHTSTT...TTCBHHHHTCCCCHHHHHTSCCCEE.. CS
  Amino_oxidase 117 lrlgleallqktldeldldskslaesleelgrrepgdvev..wdrliepelfaklefasglfagdp...selsaklalpllwelegfggslllp.. 205
                    l+  l +l+      ++++ k+++e+++   +  p+ +    +dr  +++ ++k+++ sg+  + +   ++l+++ +++++ ++e  ++ ll++  
     EPX70702.1 126 LKSPLMSLF------EKRRAKKFLEWVSNYREEDPSTHKDinLDRDSMETVYKKFGLQSGTQDF-IghaMALYLDESYIKKPARETRDRILLYAss 214
                    333333333......4455555555555554444444333355555555555555555555432.1344555555555555555544444444455 PP

                    ............TTHTHHHHHHHHH..TTTTEEEETSEEEEEEEEETTCEEEEETTSTEE.EESEEE CS
  Amino_oxidase 206 ............rgGlsqlpealae..elrgldirlntrVkeikregdgvtvtledgevv.eaDaVv 257
                                  Gl++lp+ +a+   + g++  l+++V  i+++g+gv+v +++ge+v +a++Vv
     EPX70702.1 215 makfgkspyiypMYGLGELPQGFARlsAIYGGTYMLGQPVDAIEYDGNGVAVGVRSGEQVaKAKQVV 281
                    55556666666699***************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (440 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       379  (0.0211389); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 3232.15
//
Query:       EPX70703.1  [L=336]
Description: nucleoporin Seh1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.8e-19   67.7   1.4    0.00012   22.8   0.3    5.3  5  WD40          WD domain, G-beta repeat
    4.7e-09   36.4   0.9       0.11   12.8   0.0    4.9  5  ANAPC4_WD40   Anaphase-promoting complex subunit 4 WD40 domai
    5.6e-08   32.1   0.2       0.63    8.9   0.0    4.4  5  Ge1_WD40      WD40 region of Ge1, enhancer of mRNA-decapping 
     0.0014   18.6   0.2        1.9    8.4   0.1    3.3  2  TFIIIC_delta  Transcription factor IIIC subunit delta N-term


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   6.4e-07    0.0029       6      38 .]       9      42 ..       5      42 .. 0.90
   2 ?    1.6   0.0      0.13   5.9e+02      22      37 ..      74      89 ..      62      90 .. 0.84
   3 ?    0.0   0.0      0.42   1.9e+03      24      37 ..     128     140 ..     112     141 .. 0.64
   4 !   18.0   0.0   8.8e-07    0.0039       1      37 [.     205     246 ..     205     247 .. 0.87
   5 !   22.8   0.3   2.6e-08   0.00012       3      38 .]     277     313 ..     275     313 .. 0.89

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 6.4e-07
                EEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  6 tltGHss.vtslafspdgawlasGsdDgtvriWd 38
                + t H++ +++++++ +g+ +as+s D+ v+++d
  EPX70703.1  9 IPTNHKDlINDVSYDFYGRRMASCSADQRVKVYD 42
                567898889***********************98 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.13
                SSEEEEEETTSEEEEE CS
        WD40 22 gawlasGsdDgtvriW 37
                g+ la +s D+ vr++
  EPX70703.1 74 GQVLAVCSLDRGVRVY 89
                666999999*****98 PP

  == domain 3  score: 0.0 bits;  conditional E-value: 0.42
                 EEEEEETTSEEEEE CS
        WD40  24 wlasGsdDgtvriW 37 
                 + a  s D t+ri+
  EPX70703.1 128 LAAI-SADATLRIY 140
                 3334.55*****98 PP

  == domain 4  score: 18.0 bits;  conditional E-value: 8.8e-07
                 TEEEEEEESSSS.EEEEEEETTSSE..........EEEEETTSEEEEE CS
        WD40   1 gqclrtltGHss.vtslafspdgaw..........lasGsdDgtvriW 37 
                 ++++ tl GH++ v+++      aw          la++s+Dg+vri+
  EPX70703.1 205 WKQIATLPGHTDlVRDI------AWapamgrlyhlLATASKDGNVRIF 246
                 57899*****7779***......88888888999889**********8 PP

  == domain 5  score: 22.8 bits;  conditional E-value: 2.6e-08
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++++++ H + v+ ++f+  g+ l++++dDg vr+W+
  EPX70703.1 277 LIGEYDNHkCQVWRCQFNVTGTILSTSGDDGCVRLWK 313
                 6788999*666*9999*********9999*******6 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.0   0.00057       2.6      35      78 ..      11      54 ..       3      71 .. 0.73
   2 ?    1.9   0.2      0.06   2.7e+02      37      70 ..      59      94 ..      47     119 .. 0.76
   3 ?    2.6   0.0     0.038   1.7e+02      23      81 ..      98     156 ..      88     177 .. 0.77
   4 !   12.8   0.0   2.4e-05      0.11      25      68 ..     204     249 ..     174     278 .. 0.77
   5 !    6.5   0.0    0.0023        10      34      77 ..     281     324 ..     273     331 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00057
  ANAPC4_WD40 35 dkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsv 78
                 ++++  ++++++   g+ +a   +d +v+++d e+++   ++s 
   EPX70703.1 11 TNHKDLINDVSYDFYGRRMASCSADQRVKVYDFEEEHENWKVSS 54
                 678899**************************998765444433 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.06
  ANAPC4_WD40 37 edsevrsLaWkpd..gklLavaysdgevrlldaesg 70
                  d +   ++W +   g++Lav   d  vr+++ ++g
   EPX70703.1 59 GDASLMRIEWAHPefGQVLAVCSLDRGVRVYQEQKG 94
                 5566667777653239************99998877 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.038
  ANAPC4_WD40  23 RlngqrvwtleedkedsevrsLaWkp..dgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  R  + +v +l   +  s v ++++ p   g  La   +d ++r+++a + + ++s++  +e
   EPX70703.1  98 RKTWVEVAKL--MDARSAVMDISFCPiqHGCKLAAISADATLRIYEALEPENLSSWTLMDE 156
                  6667777777..566777777777652267789**************99999988877655 PP

  == domain 4  score: 12.8 bits;  conditional E-value: 2.4e-05
  ANAPC4_WD40  25 ngqrvwtleedkedsevrsLaWkpd.g...klLavaysdgevrlldae 68 
                  +++++ tl  +++   vr++aW p  g   +lLa a +dg+vr+++++
   EPX70703.1 204 KWKQIATL--PGHTDLVRDIAWAPAmGrlyHLLATASKDGNVRIFKVS 249
                  78999999..8999*********974344489************9985 PP

  == domain 5  score: 6.5 bits;  conditional E-value: 0.0023
  ANAPC4_WD40  34 edkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhsls 77 
                   d+++ +v   +++  g++L  + +dg vrl +a+ +++ + +s
   EPX70703.1 281 YDNHKCQVWRCQFNVTGTILSTSGDDGCVRLWKASYANLFKCIS 324
                  57899999************************999888766555 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.4   0.0    0.0067        30     176     234 ..       3      60 ..       1      66 [. 0.84
   2 ?   -1.7   0.0      0.25   1.1e+03     199     215 ..      74      90 ..      60      98 .. 0.87
   3 !    8.9   0.0   0.00014      0.63      59     128 ..     105     178 ..      95     187 .. 0.74
   4 !    6.5   0.0   0.00075       3.4     201     223 ..     233     255 ..     182     266 .. 0.81
   5 !    7.4   0.0   0.00042       1.9     184     216 ..     281     314 ..     256     323 .. 0.77

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.0067
    Ge1_WD40 176 eieegllkieehsliveaafspdGtalatasedGevkffqvyledeeeprCLheWkPhd 234
                 ++e++++  +++ li + ++   G  +a +s+d  vk +  + e++e+ +   eW+  d
  EPX70703.1   3 KVESTTIPTNHKDLINDVSYDFYGRRMASCSADQRVKVYD-FEEEHENWKVSSEWRAGD 60 
                 56777888888889999999999****************9.567888999999999765 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.25
    Ge1_WD40 199 GtalatasedGevkffq 215
                 G +la++s d  v+ +q
  EPX70703.1  74 GQVLAVCSLDRGVRVYQ 90 
                 889***********999 PP

  == domain 3  score: 8.9 bits;  conditional E-value: 0.00014
    Ge1_WD40  59 aLlkglkgevldlafahvss.killavdekgslfvykveeve...skllvslllkveapietvvsesdrviWCP 128
                 a l + +++v+d++f  +++  +l+a+   + l +y+  e e   s  l++ +  + +p +   + s  v+WCP
  EPX70703.1 105 AKLMDARSAVMDISFCPIQHgCKLAAISADATLRIYEALEPEnlsSWTLMDEIKLLPSPPSRNEQFSFCVSWCP 178
                 5677899*********998725799***********976554131223333333347788888889999****9 PP

  == domain 4  score: 6.5 bits;  conditional E-value: 0.00075
    Ge1_WD40 201 alatasedGevkffqvyledeee 223
                  latas+dG v+ f+v +  +++
  EPX70703.1 233 LLATASKDGNVRIFKVSIPLQTN 255
                 59*************98875555 PP

  == domain 5  score: 7.4 bits;  conditional E-value: 0.00042
    Ge1_WD40 184 ieehs.liveaafspdGtalatasedGevkffqv 216
                  ++h  ++    f   Gt l+t+  dG v++++ 
  EPX70703.1 281 YDNHKcQVWRCQFNVTGTILSTSGDDGCVRLWKA 314
                 45564489999********************985 PP

>> TFIIIC_delta  Transcription factor IIIC subunit delta N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.1   0.00043       1.9      96     141 ..     112     153 ..      33     169 .. 0.81
   2 ?    3.6   0.0     0.012        56      20      80 ..     239     301 ..     233     309 .. 0.75

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00043
  TFIIIC_delta  96 sqvvaaaWSPlgLsknrrClLavLtttgeLsiyeasgnkekssWtr 141
                   s v ++++ P      + C La+ + + +L iyea +  + ssWt 
    EPX70703.1 112 SAVMDISFCPIQ----HGCKLAAISADATLRIYEALEPENLSSWTL 153
                   556666666664....999999999999999999999999999974 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.012
  TFIIIC_delta  20 tgesiyiLepklplqklklnrsgiqaseatkqavklranv...fsededpnwsqaseenysige 80 
                    + ++ i+++ +pl + ++++s+ ++s a+ ++  +++++    ++++   w+ +++ + +i  
    EPX70703.1 239 KDGNVRIFKVSIPL-QTNQATSFEYESAAETTEEPIKVELigeYDNHKCQVWRCQFNVTGTILS 301
                   5789**********.5566788888888855556788888777778888888888877777655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (336 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       561  (0.0312901); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.29s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 2354.15
//
Query:       EPX70704.1  [L=123]
Description: nuclear transport factor Nxt2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.7e-37  127.2   0.5    5.3e-37  127.1   0.5    1.0  1  NTF2      Nuclear transport factor 2 (NTF2) domain
      0.003   18.0   0.0     0.0037   17.7   0.0    1.1  1  DUF4440   Domain of unknown function (DUF4440)
     0.0076   15.5   1.2      0.037   13.2   1.2    1.9  1  DUF4518   Domain of unknown function (DUF4518)
  ------ inclusion threshold ------
       0.12   12.3   0.0       0.15   12.0   0.0    1.2  1  Mtr2      Nuclear pore RNA shuttling protein Mtr2


Domain annotation for each model (and alignments):
>> NTF2  Nuclear transport factor 2 (NTF2) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.1   0.5   1.2e-40   5.3e-37       2     120 .]       8     120 ..       7     120 .. 0.97

  Alignments for each domain:
  == domain 1  score: 127.1 bits;  conditional E-value: 1.2e-40
                 HHHHHHHHHHHHHHHGGGGGGGGEEEEEEEEEETTEEEEESHHHHHHHHHHSSCSCEEEEEEEEEEEETSEGGGCEEEEEEEEEEEETTSCCEEEEEEE CS
        NTF2   2 akafvqqYYaaldagdregllalyaadaslltpegsspvkgreaIteffrslpftrielkittvdaqpdeaslstgvlvmvtGelkvddfkkrrkfsqt 100
                 a++f+q YY+++d+ dr++l+ ly +d+s+l++eg  +++g+++I+e+++slpf+r++++i+t+daqp++a  +++v+vmvtGel +d+++ ++++sq+
  EPX70704.1   8 ATQFTQFYYQTFDT-DRSQLSSLY-RDESMLSFEGA-QLQGAKDIVEKLMSLPFQRVQHRISTLDAQPTGA--NGSVVVMVTGELLLDEEQMAQRYSQV 101
                 789***********.*********.***********.******************************9765..79****************99****** PP

                 EEEEEETTTEEEEEEEEEEE CS
        NTF2 101 filapqsnkgyfvlnDifrl 120
                 f+l++++ ++yfvlnD+frl
  EPX70704.1 102 FHLVNNG-GNYFVLNDLFRL 120
                 ******9.**********96 PP

>> DUF4440  Domain of unknown function (DUF4440)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   8.2e-07    0.0037      14     102 ..      20     108 ..       7     112 .. 0.87

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 8.2e-07
                 CT-HHHHHHCEEEEEEEE-TTS-EEEHHHHHHHHHCCHCEEEEEEEEEEEEEEETTEEEEEEEEEEEECCTTEEEEEEEEEEEEEEEET CS
     DUF4440  14 agdaealaallapdavlvgpsgtvldkeellealeagfaagrslelteeevrvlgdlAvvtgrytfegrgdgepvegrgrftsvwrkeg 102
                   d+ +l +l++++ +l   + ++++ ++++e+l++ +++  + ++++++ +++g  + v++ +t e   d+e++++r+  ++ ++ +g
  EPX70704.1  20 DTDRSQLSSLYRDESMLSFEGAQLQGAKDIVEKLMSLPFQRVQHRISTLDAQPTGANGSVVVMVTGELLLDEEQMAQRYSQVFHLVNNG 108
                 57899*******************************999999**************999999999***99**98888666665555555 PP

>> DUF4518  Domain of unknown function (DUF4518)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   1.2   8.2e-06     0.037     131     253 ..       3     106 ..       1     110 [. 0.82

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 8.2e-06
     DUF4518 131 elellaeeFtkWFfellnsqnpslgqskedlgpqhFwedaklklllsasseeqveevegaeevserLlslvkeeslllnPnleseGvkgrisphGlVlv 229
                 + + la +Ft++++++++ ++++l++         +++d ++  +       +  +++ga++++e+L+sl +++       l++      + ++G V+v
  EPX70704.1   3 DFNALATQFTQFYYQTFDTDRSQLSS---------LYRDESMLSF-------EGAQLQGAKDIVEKLMSLPFQRVQHRISTLDA----QPTGANGSVVV 81 
                 6789***************5555555.........8888766555.......57899**************9998887788887....467789***** PP

     DUF4518 230 lvaGtihr.ensclGiFEqifgLir 253
                 +v G +   e+++   + q+f L+ 
  EPX70704.1  82 MVTGELLLdEEQMAQRYSQVFHLVN 106
                 ****998626699999999999986 PP

>> Mtr2  Nuclear pore RNA shuttling protein Mtr2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   3.3e-05      0.15      24      95 ..      20      92 ..       3     115 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 3.3e-05
                CCHHHHHCCB-SSS-EEEETTEEESSHHHHHHHHHHHS-.-EEEEEEEEEEEEETTTSEEEEEEEEEEEEBTT CS
        Mtr2 24 nkleqflqlFlkpqckivfngkPlaqaaaFlkiwlqsvv.ltqHaltalDfHvipgtgtliinanckvrfdes 95
                +  ++ l    ++++ + f g  l +a+   ++ +  +   +qH +++lD     + g++++ +++   +de 
  EPX70704.1 20 DTDRSQLSSLYRDESMLSFEGAQLQGAKDIVEKLMSLPFqRVQHRISTLDAQPTGANGSVVVMVTGELLLDEE 92
                455556666677788888888888888777776666665169****************************875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       534  (0.0297841); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 926.55
//
Query:       EPX70705.1  [L=698]
Description: serine/threonine protein kinase Sck1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.6e-67  226.5   0.0    5.1e-67  226.0   0.0    1.2  1  Pkinase        Protein kinase domain
    1.6e-28   99.7   0.0    2.5e-28   99.1   0.0    1.3  1  Pkinase_Tyr    Protein tyrosine kinase
    6.4e-11   42.8   2.8    6.4e-11   42.8   2.8    2.3  3  Pkinase_C      Protein kinase C terminal domain
    2.5e-06   27.7   0.7     0.0034   17.6   0.0    3.0  3  C2             C2 domain
    2.6e-06   27.0   0.0      5e-06   26.0   0.0    1.5  1  Kinase-like    Kinase-like
  ------ inclusion threshold ------
      0.028   13.4   0.1      0.028   13.4   0.1    2.2  3  Haspin_kinase  Haspin like kinase domain


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  226.0   0.0   1.7e-70   5.1e-67       2     264 .]     317     577 ..     316     577 .. 0.92

  Alignments for each domain:
  == domain 1  score: 226.0 bits;  conditional E-value: 1.7e-70
                 EEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHS...CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS-- CS
     Pkinase   2 ekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklk...hpnivrlyevfeekdelylvleyveggeladllerkgsls 96 
                 + l+ +G+G+fG Vy + +++tg+i+A+Kki+k+ + kkke ++++ E +il +++   +p+iv l+ +f++ ++lyl+++y++ggel+ +l+++g + 
  EPX70705.1 317 TILRLIGKGTFGHVYLVQKTDTGRIYAMKKISKKLIVKKKEvTHTIGERNILVRTSldeSPFIVGLKFSFQTASDLYLITDYMSGGELFWHLQHEGRFR 415
                 67899*********************************99999********99888889**************************************** PP

                 HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.BCTTTSCGGGS-HHHH.TTSCBSHHHHHHHHHHHHHHHHHS CS
     Pkinase  97 eeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.ltsfvgtseYlAPEvl.keneyskkvDvWslGvilyelltg 193
                 e++ak+++++++ +le+lH++ ii+rDlKpeNiL+d +g++ ++DFGl+k   s ++ +++f+gt eYlAPEvl ++++y+k+vD WslGv+++e+ +g
  EPX70705.1 416 EDRAKFYIAELVLALEHLHKHDIIYRDLKPENILLDISGHIALCDFGLSKANLSFEDtTNTFCGTTEYLAPEVLlDDKGYTKQVDFWSLGVLVFEMCCG 514
                 *************************************************9765555459***************999********************** PP

                 S-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS.-HHHHHHHHHHT-SSGCCSTT....HHHHHTSGGG CS
     Pkinase 194 kppfsgekgkekvekeldqlekilkilgetkeklpeasei.seeakdllkkllkkdpkkRlt....aeellqhpyl 264
                   pf++ + ++ +++++               k++ ++ i s+ea+++++ ll+++pk+Rl+    aeel++hp++
  EPX70705.1 515 WSPFYAPDVQQMYRNIAFG-------------KVRFPKGIlSQEARSFVRGLLNRNPKHRLGaladAEELKAHPFF 577
                 *****66666644444444.............344455444*********************99999*******98 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.1   0.0   8.4e-32   2.5e-28       3     249 ..     318     561 ..     316     566 .. 0.82

  Alignments for each domain:
  == domain 1  score: 99.1 bits;  conditional E-value: 8.4e-32
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTT..SSHHHHHHHHHHHHHHHTS...-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkee..ateeekeelleeakimkkl...khpnivkllgvctkeepllivteyvkgGdLlkfLrkk 95 
                  + + +G+G+fG+V+  + +    ++    a+K+++++   +++e ++ + e +i+ ++   + p iv l      ++ l+++t+y++gG+L  +L+++
   EPX70705.1 318 ILRLIGKGTFGHVYLVQKT----DTGRIYAMKKISKKliVKKKEVTHTIGERNILVRTsldESPFIVGLKFSFQTASDLYLITDYMSGGELFWHLQHE 411
                  6788**********99888....5555566666644311456667777888888865533778889999999999999*****************997 PP

                  CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE.EEHHHHHHHHH CS
  Pkinase_Tyr  96 ekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk.ftsksDvWsfG 192
                     +++ ++   +++++  ++e+L++++++ rdl   N+Ll+ + ++ ++DfGL+++  +     ++++     +++apE+l + k +t++ D Ws G
   EPX70705.1 412 --GRFREDRAKFYIAELVLALEHLHKHDIIYRDLKPENILLDISGHIALCDFGLSKANLSF--EDTTNTFCGTTEYLAPEVLLDDKgYTKQVDFWSLG 505
                  ..999999999999******************************************98443..344455567899******988777*********** PP

                  HHHHHHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS CS
  Pkinase_Tyr 193 vllwEiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeR 249
                  vl++E+++ g sp+   + +++++++  gk        ++e  ++++  ++++p++R
   EPX70705.1 506 VLVFEMCC-GWSPFYAPDVQQMYRNIAFGKVRFPKGILSQEARSFVRGLLNRNPKHR 561
                  *******9.****************98777655555677777777777777777777 PP

>> Pkinase_C  Protein kinase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.1         6   1.8e+04      29      38 ..     125     134 ..      90     144 .. 0.63
   2 !   42.8   2.8   2.1e-14   6.4e-11       1      46 []     598     647 ..     598     647 .. 0.98
   3 ?   -2.9   0.1       3.9   1.2e+04      13      25 ..     663     675 ..     662     691 .. 0.68

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 6
   Pkinase_C  29 agspltssvq 38 
                  ++p +s+ q
  EPX70705.1 125 LKTPPSSHSQ 134
                 3334444333 PP

  == domain 2  score: 42.8 bits;  conditional E-value: 2.1e-14
   Pkinase_C   1 vesdeDtsNFDpeFTeedprdtppddm....pagspltssvqenFrGFtY 46 
                 vesd+D+sNFD eFT++++r   +++     + ++pl++  q+ FrGFt+
  EPX70705.1 598 VESDLDVSNFDQEFTNTNVRNMNLNGShdsvNGSTPLSNTIQDRFRGFTF 647
                 8******************99999999**********************9 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 3.9
   Pkinase_C  13 eFTeedprdtppd 25 
                 eF e+d++  ++ 
  EPX70705.1 663 EFNETDLPKDSVG 675
                 8999987766554 PP

>> C2  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1       3.1   9.1e+03      19      39 ..      32      51 ..      13      62 .. 0.58
   2 !    7.5   0.0    0.0017       4.9       1      39 [.     153     188 ..     153     197 .. 0.77
   3 !   17.6   0.0   1.2e-06    0.0034      46     103 .]     231     284 ..     205     284 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 3.1
                TSSCEEEEEEEEECEEEEEE- CS
          C2 19 kgssdpyvkvsldgkqkakTr 39
                + ss p v+v+   + k+ T+
  EPX70705.1 32 SLSSTPSVSVET-AEAKGMTE 51
                334555555555.55555555 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0017
                 TEEEEEEEEEESSSSSSTTSSCEEEEEEEEECEEEEEE- CS
          C2   1 gklevtvieAknLpnkdkkgssdpyvkvsldgkqkakTr 39 
                 g+l v+  +A+nL     + +++py+++++ +k+ + T 
  EPX70705.1 153 GRLVVRLRQARNLLIS--SMHVEPYAVINY-DKTEVVTP 188
                 6899*********888..789*********.55544444 PP

  == domain 3  score: 17.6 bits;  conditional E-value: 1.2e-06
                 SSEEEEEEEEEESCHTTSEEEEEEEEECSSSTEEEEEEEEEEGHHHHTTHHHHEEEEH CS
          C2  46 nPvWnekftfevaeleeakLeveVfdndrlskddfiGkveiplstllsgeeaegwypl 103
                  P+W+ + +f+v + +e+++ ++V+d  rl++d f+G v++   + +++   egwy+l
  EPX70705.1 231 APRWDFETVFDVIN-PESTVSISVYD--RLNGDCFLGSVKVAPVS-MNEYLNEGWYKL 284
                 6*************.***********..456*********98555.588888999876 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.0   1.7e-09     5e-06     139     288 .]     413     561 ..     352     561 .. 0.77

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 1.7e-09
  Kinase-like 139 kkletiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvlseve.....kgfaPpEllgsrggytrknktkmthkl 231
                  +  e+ a+ ++ ++l+    +L+++ ++  +++++n+lld  g + l +f+ L +a  +    +++       +  pE+l   +g        +t ++
   EPX70705.1 413 RFREDRAKFYI-AELVLALEHLHKHDIIYRDLKPENILLDISGHIALCDFG-LSKANLSFE-DTTNtfcgtTEYLAPEVLLDDKG--------YTKQV 499
                  34567788888.7888888*******************************7.777777766.22222335444555666666555........6779* PP

  Kinase-like 232 daWqlGlviyriwclklPltl.ateeakeewkfklck.k...ipekvkaLlkkfLqlsqedR 288
                  d W lG+ ++ + c   P+   + +++  +  f +++ +    +++ +  ++++L+++ ++R
   EPX70705.1 500 DFWSLGVLVFEMCCGWSPFYApDVQQMYRNIAFGKVRfPkgiLSQEARSFVRGLLNRNPKHR 561
                  ******************97514556666668888877423368999999999999998776 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   1.6      0.77   2.3e+03      33      91 ..      20      73 ..       5     166 .. 0.54
   2 ?   -2.1   0.0      0.48   1.4e+03     108     132 ..     314     348 ..     291     399 .. 0.67
   3 ?   13.4   0.1   9.3e-06     0.028     229     258 ..     439     470 ..     413     480 .. 0.76

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 0.77
  Haspin_kinase 33 ssssessssnkislPvkdqvsrdkikkklrnsesllslnsqeevkdfdevilsqilelc 91
                   +ss +s +s kisl    +vs + +++k      +    +q+  +++d ++l + l++ 
     EPX70705.1 20 YSSPSSDPSFKISLSSTPSVSVETAEAK-----GMTEYDNQNVSTNYDPILLPDRLKNV 73
                   3333333444444433333333333222.....22233333333445555544444433 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.48
  Haspin_kinase 108 d........seklssevyqtkekdke..vvlKvip 132
                    d        +++ +++vy ++++d+    ++K+i+
     EPX70705.1 314 DdftilrliGKGTFGHVYLVQKTDTGriYAMKKIS 348
                    23444444588889999999985554114567776 PP

  == domain 3  score: 13.4 bits;  conditional E-value: 9.3e-06
  Haspin_kinase 229 EHRdLhldniLvdknlnvtlidlklsRle..s 258
                      RdL+ +niL+d ++++ l+d+ ls+++   
     EPX70705.1 439 IYRDLKPENILLDISGHIALCDFGLSKANlsF 470
                    35************************998531 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (698 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       620  (0.0345808); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.65u 0.28s 00:00:00.93 Elapsed: 00:00:00.45
# Mc/sec: 4664.40
//
Query:       EPX70706.1  [L=398]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.2e-46  156.4   0.4    1.5e-45  155.7   0.4    1.3  1  Brix        Brix domain
  ------ inclusion threshold ------
       0.16   12.2  14.4       0.37   11.0  14.4    1.7  1  AP3D1       AP-3 complex subunit delta-1
       0.61    9.3   6.8       0.98    8.7   6.8    1.2  1  PPL5        Prim-pol family 5
        2.7    6.7   7.0          4    6.1   7.0    1.2  1  Presenilin  Presenilin


Domain annotation for each model (and alignments):
>> Brix  Brix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  155.7   0.4   3.3e-49   1.5e-45       7     193 .]      41     302 ..      36     302 .. 0.86

  Alignments for each domain:
  == domain 1  score: 155.7 bits;  conditional E-value: 3.3e-49
                 HHHHHHHHHHHHCTTSEEEEEE.ECT-TTTHHHHHHH...-HHHHHHHH.HCTCSEEEEEE..SSTTEEEEEEEEECECTGGGSTTTS......TS-TT CS
        Brix   7 rlrqllkdlrslmkphtasflk.rnsnklkdlvelag...vthlellse.kndcslfvfelskkrPngptlefkvenyslmkdlkkak......ktefg 94 
                  l+ l +dlr++m+phta +l+ r++nklkd+++++g   v+hl++ls+  ++++l+++++    P+gp l+f++++y+l kd+++ +      + ef 
  EPX70706.1  41 SLSLLTRDLRHMMEPHTAVRLReRKANKLKDYLTMTGplgVSHLLVLSRsDTNANLRIVRA----PRGPALHFRIHEYMLNKDVRNLQktpkspNAEFL 135
                 48899*****************9999***********************87788*******....*******************99999999******* PP

                 ---EEEEES.HHH...........HHHHHHHHHHH..SEEEG..-B-GG-SEEEEEEES.CCTTTECEEEEEEEEEE...............E..STTT CS
        Brix  95 srPllvfngkenf...........kllksllqdlFrvpkislkspklsglrrvvlftaaenqetdktisfRhYaikl...............kksgkkl 167
                 ++Pllv+n   +f            ll++++q++F  p++sl+s++ ++++rv+l++   + +++ +i++RhY i++               ++     
  EPX70706.1 136 TPPLLVMN---HFntkssketpheALLTTTFQNMF--PPLSLQSTNVNSVKRVLLLN---KRDDG-YIDLRHYLITTkpvgvsrpikrllkgQT----- 220
                 ********...6666778888888***********..********************...44555.9********9977777777766555533..... PP

                 TECT...............................................................T..EEEEEEESEEEEEEEEE CS
        Brix 168 pnleke.............................................................kkerveLeEiGPrfdLklrk 193
                      +                                                             k+++++L EiGPr++L+l+k
  EPX70706.1 221 -----HpsdlpdlggvrdisdfvlhgegmsgapsdseaeedatvevsrpaptkieekllsesqllkpKQQAIKLIEIGPRLTLELTK 302
                 .....13334445555777777777777888888888888888888888888888889988888866699**************986 PP

>> AP3D1  AP-3 complex subunit delta-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0  14.4   8.2e-05      0.37      63     119 ..     325     387 ..     302     398 .] 0.65

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 8.2e-05
       AP3D1  63 lkrsdkyleeeesrkakkkakeekkkkkkkkkkkkkkkk......kkkkkkeeesseseeddk 119
                 + ++dk+ ee++s k+k+k  +e++ ++k  kkkkk+kk      +++ +++e +se ee+++
  EPX70706.1 325 VRQLDKFHEENRSLKEKRKRVQEQNVQRKLDKKKKKSKKnkpsseHSGSEASEGESEGEEEEE 387
                 6789******88888887777777777666666666666446665333333333333333332 PP

>> PPL5  Prim-pol family 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   6.8   0.00022      0.98     157     231 ..     307     386 ..     287     396 .. 0.46

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00022
        PPL5 157 pskdkvsyhvharslty...leerlaaeakgveeveeksskkkskekkkklkkktsrkkkkegkk.ekese.keeedede 231
                 +  +kv yh h+        + +++++e++ ++e ++  +++++++k  k kkk++++k +++++ +++se ++e +e+e
  EPX70706.1 307 AIGGKVLYHSHVHKSEDevrQLDKFHEENRSLKEKRKRVQEQNVQRKLDKKKKKSKKNKPSSEHSgSEASEgESEGEEEE 386
                 45689999999865544011334444444444444444444444444333333322222221111011122012222222 PP

>> Presenilin  Presenilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   7.0   0.00088         4     200     291 ..     298     387 ..     289     397 .. 0.36

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.00088
  Presenilin 200 velaqerneeifpaLiYsatvvvlaaeek...kaevaeseeeeeaekkkeeasesskeeeseeesseksaqsseseeeseeesseaessaeesse 291
                 +el +  +e i   ++Y ++v  +++e +   k ++++++ +e++++ +e++ +++ ++++++++++k +++++      +e+se es+ ee++e
  EPX70706.1 298 LELTKVTEEAIGGKVLYHSHVHKSEDEVRqldKFHEENRSLKEKRKRVQEQNVQRKLDKKKKKSKKNKPSSEHS-----GSEASEGESEGEEEEE 387
                 56666667777777788887777755544332222222222222222222222222222222111111111111.....1111111111111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (398 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2225  (0.124101); expected 358.6 (0.02)
Passed bias filter:                      751  (0.0418874); expected 358.6 (0.02)
Passed Vit filter:                       119  (0.00663729); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.66u 0.27s 00:00:00.93 Elapsed: 00:00:00.43
# Mc/sec: 2774.43
//
Query:       EPX70707.1  [L=1893]
Description: DNA repair protein Mus7/Mms22 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.6e-117  394.0  17.4   2.9e-117  393.1  17.4    1.4  1  Mus7      Mus7/MMS22 family


Domain annotation for each model (and alignments):
>> Mus7  Mus7/MMS22 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  393.1  17.4  1.6e-121  2.9e-117       1     614 []     919    1543 ..     919    1543 .. 0.94

  Alignments for each domain:
  == domain 1  score: 393.1 bits;  conditional E-value: 1.6e-121
        Mus7    1 sEslWqklftllplsevdangitqagarlkenWslvkrllsrvlersdenkemaasrnrYvrillqrcyfLvsewgWrdaekilltlydfFksrkla 97  
                  +E++W+ l+t +p+++   +g++ ++++ ++ W+lv +  ++ +er++++   + + +rY+r+ll r+ +L+sew W d   il +++dfF++rk+ 
  EPX70707.1  919 MEKIWYILITVSPVFQFNDLGVAGSPTS-HSYWPLVLKTCRSTFERQKKGVDPK-ITERYLRVLLLRINLLISEWFWSDVSCILIAIFDFFSHRKFT 1013
                  79**************************.*********************9977.9***************************************** PP

        Mus7   98 dLeeEeeykspa....fleeLdrapsldieaeddcFhiFlklLalaiqeLrel.eskkkikrlvsRllPvhkrqytkedpitqsdlaaLrNhhdLll 189 
                  dL+ E++++  +    f+++Ldr+p+l+i a d+cF iFlk   ++iq+L+   +++++i+r+vsRl+P+h rqy++e p++ +d+++L ++h+Ll+
  EPX70707.1 1014 DLSYESSEDVASqfpdFVKSLDRSPDLHISALDTCFVIFLKTVIVSIQRLKCDsKNTSTIRRIVSRLQPLHARQYRREIPFSMKDYMSLEHTHTLLI 1110
                  ******9986666666**********************************65459999*************************************** PP

        Mus7  190 lLlwavptslrprleeikslvapkdshkeaclisirawgqlarvkistkedrsllepvvkwfnnvisellkeyelaeseieaaiemwksfshalaeq 286 
                   L+w++p++++p +++i++ v ++ sh +a+lis++aw+ l+r+ +  + d + l + + w+ ++i+ +l+ey+++         + +  ++  + +
  EPX70707.1 1111 SLFWVAPENCKPNINRIRDNVIFEGSHLKARLISLKAWQYLMRYILLYGSDAQ-LDACMYWLDSLIKVTLDEYLSL---------VLS-DQSLDEVE 1196
                  ***************************************************99.7799*****************7.........222.22333558 PP

        Mus7  287 laeknkrtveslLkvalrslqdvi.qtsktleaanlllskaqlkqilellksleprvnqealkviqtfl.......lqpaltteeqqqkqedddarD 375 
                  l+++++ ++e+ L v + slq +i   s ++ ++n ll+  + + i + + sl +rv  e++ +++++l        + + t+    + +++d++++
  EPX70707.1 1197 LIAYSQGQLEDFLLVVFYSLQALIpSPSVYIRRINCLLTLHSSQCIFQKSSSLPSRVVLECTYFLKKLLtyhsvcqVPREKTVTSVVSADSQDAYFE 1293
                  9***********************8889*****************************************99877764455555555889******** PP

        Mus7  376 eeslddiallleeedt...kefvelvrsllspalkqllsnilgedrctEka...vleavvdcwakiaqvLvknglrevwssqyskfgleswkrirnt 466 
                  ++  dd +l++e+e++    e ++l+r+ +sp l+q++s i+g d+   k    v  ++++c+a +a++ v++++++ ws+ y +fg esw+rirnt
  EPX70707.1 1294 NDYIDDTELMIEQEKFeriCELAKLLRKHVSPYLYQTISTIVGSDESEYKSfrpVSIPLMECMALCASFAVEAKIND-WSY-YVDFGTESWERIRNT 1388
                  ****************6666777889999****************99888633369********************9.***.*************** PP

        Mus7  467 tkrrkflllFlakllekdaaavqeieeevlsvwlqslvkrvsslkdehsltevlkkvkrkdptLknlpflaketisislatgenqrlsllsdalanl 563 
                  + +r+++ +F++ l+e +++++ + +e+v++vw++sl + ++s  +   +t +l+++++++p+L nlp++ + +  +   ++++++lsl+s++l n+
  EPX70707.1 1389 RLKRSLSSQFYSILIETNVSFLADQREKVMTVWFESLGALNDS--YAAPFTLLLLEKDKNNPLLFNLPIILDDQ-AAFFRQFKSVQLSLISSVLGNM 1482
                  *************************************777777..666************************95.56678999************** PP

        Mus7  564 r...........rslsldkdeftellqallrsmksvyekllaskttshgtyvdfvsrlvsfi 614 
                  +           +s ++++  f ++l++ll sm+s+ye+l  s  + h+ +++ ++r+v++i
  EPX70707.1 1483 AkiyddvksnymESQQYHQILFLQYLSSLLASMQSSYESLVFSG-DDHSIFISSAQRVVGDI 1543
                  ******************************************99.**************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1893 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       828  (0.0461822); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.00u 0.30s 00:00:01.30 Elapsed: 00:00:00.50
# Mc/sec: 11353.48
//
Query:       EPX70708.1  [L=308]
Description: HbrB family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-25   90.0   2.5    3.3e-25   89.0   2.5    1.5  1  HbrB      HbrB-like


Domain annotation for each model (and alignments):
>> HbrB  HbrB-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.0   2.5   1.8e-29   3.3e-25       6     168 ..     100     252 ..      96     253 .. 0.93

  Alignments for each domain:
  == domain 1  score: 89.0 bits;  conditional E-value: 1.8e-29
        HbrB   6 aWqllcvrvlplFnged..........lrvpiEdlnklvelhiqlvierakalsllvedleeLlstglltLenkLsq....leeerllkrLveiWkffy 90 
                 aW+ l++++ plF +             ++ +E+ln l+ ++i+ + +         +d+++L++t+ ++L++++s     +++++ + +L+e W++fy
  EPX70708.1 100 AWKELNLAMRPLFPQHRikktdeqnwrKHIIVEELNLLLLRCISSCEAI--------RDFDDLIETARVSLTVDISLmngiKKQSHGIIELIEEWRMFY 190
                 8************5444555667789999*****************999........*******************999*999**************** PP

        HbrB  91 tqvlpyleavfLPLetefklssllaeskekrsaspasqasssssstssssksserldvrrllLiaFRDsvvlPiyerl 168
                 ++ lpy+ea+fLP++ e ++ ++l+e+ +k+                ++ ++se++dv+ l+L+aFR  vv+P+++++
  EPX70708.1 191 SESLPYIEATFLPITFERTEIAQLFEEPMKS----------------YWLRKSEQVDVKVLCLWAFRTFVVIPKLKKI 252
                 **************************99944................899************************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (308 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       578  (0.0322383); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 2134.87
//
Query:       EPX70709.1  [L=70]
Description: EKC/KEOPS complex subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       641  (0.0357521); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.34s 00:00:00.86 Elapsed: 00:00:00.54
# Mc/sec: 388.21
//
Query:       EPX70710.1  [L=421]
Description: aminotransferase class I and II [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.5e-68  230.1   0.0    5.1e-68  229.9   0.0    1.0  1  Aminotran_1_2    Aminotransferase class I and II
    2.8e-05   23.6   0.0    5.6e-05   22.6   0.0    1.4  1  DegT_DnrJ_EryC1  DegT/DnrJ/EryC1/StrS aminotransferase family
    4.4e-05   22.9   0.0     0.0001   21.7   0.0    1.6  1  Beta_elim_lyase  Beta-eliminating lyase
     0.0005   18.7   0.1      0.001   17.7   0.1    1.4  1  Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
    0.00054   19.0   0.1     0.0055   15.7   0.1    2.0  1  Aminotran_5      Aminotransferase class-V


Domain annotation for each model (and alignments):
>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  229.9   0.0   1.4e-71   5.1e-68       4     363 .]      35     414 ..      32     414 .. 0.94

  Alignments for each domain:
  == domain 1  score: 229.9 bits;  conditional E-value: 1.4e-71
                    EESSSSSTTSTTSSHHHHHHHHHHHHHHHHHTSTTST-BTTHHHHHHHHHHHHHCTCTTCHTTGGEGEEEESHHHHHHHHHHHHHHHTTT-EEEEE CS
  Aminotran_1_2   4 inLgsneylgdsgkptlpevakaekegalaggtlneygpidglpeleealakflgrseklklkreaavvvgsGagaliealifllklnpgdeilvp 99 
                    + L+++ + +     +++ v+ a+k+   +  ++n+y++++g  +l++al k ++   + kl++++++vv+ Ga+++   ++++  lnpgde+++ 
     EPX70710.1  35 VSLSQGFFNYS----PPKFVLDAAKK-CIDDVSCNQYSHTRGRISLRNALSKAYSPLFNRKLNPDTEIVVTAGANEGFYSVFAAY-LNPGDEVILM 124
                    789********....***********.****************************777999************************.********** PP

                    ESS-THHHHHHHHTTSEEEEEEBEET..........TTTEE-HHHHHHHHTTHHCTTETEEEEEEESS-TTT--B--HHHHHHHHHHHHHTTEEEE CS
  Aminotran_1_2 100 dptyasyknilrlsggevvryplyse..........edfhldlealeealkeapegnkktkvilvesphNPtGtvatleeleklldlakkynlllf 185
                    +p++++y  +++++gg  v++p+ ++          ++++ld++ l +a+++      ktk+i++++phNP G+v+++eel +++d++ k+nll++
     EPX70710.1 125 EPFFDQYVSNVQMNGGVPVYVPMIPPkegaehpvsaKEWKLDMNRLRAAITN------KTKMIVINTPHNPLGKVFSEEELNEIADIVLKHNLLVV 214
                    **********************9999**************************......************************************** PP

                    EEETTTTCBSSSSHTHHHHGGSTTSTT..EEEEEESSSTTSSGGG-EEEEEEEHHHHHHHHHHHHHHTS..SHHHHHHHHHHHHHHHHHHHHHHHH CS
  Aminotran_1_2 186 vDeaYagfvfgsldavatranveeepn..llivgslsKafGlaGeRvGyilgnaavvsqlrklsrpfls..ssllqaavaaalsdallkqseleem 277
                    +De+Y  + +++  +v+ +a++ +e    +++vgs +K fG++G+RvG+i+g++ ++++ + +++++++   s+lq+a+a a + a+++  + +e 
     EPX70710.1 215 SDEVYDRLFYTP--FVR-LATLRPELFrhVVTVGSGGKTFGCTGWRVGWIIGDESIIKHSAAAHTRICFcvNSPLQEATAIAFEEANKVG-YWDEY 306
                    ***********4..555.7777777666799********************************************************986.***** PP

                    HHHHHHHHHHHHHHHHHSTEEEECCSCSSEEEEEETHH..............CHHHHHHH........HHHTCTEEEEEGGGGTS.......TTEE CS
  Aminotran_1_2 278 rqrlqkrrkelrdeLaelglkvlasqsgmflltdlsae..............takelskk........Lleevgvyvtpgtsftv.......pgrl 344
                     ++++kr   l +++++lg++++++++ ++++  + +               +               +l+e gv+ +p t+f++       +  l
     EPX70710.1 307 ISTYKKRFSILAKAFDQLGIPYTIPDGSYYVMANFAKVkmpenypfpehilsR------PrdfqlcfwMLKEIGVATIPPTEFYTdedafmaQDYL 396
                    **************************************777666665555551......155555566**************************** PP

                    EEECTTS-HHHHHHHHHHH CS
  Aminotran_1_2 345 RitvAglteeeleelveal 363
                    R+++ + t e+lee +++l
     EPX70710.1 397 RFSF-CKTYETLEEGAKRL 414
                    ****.*********99986 PP

>> DegT_DnrJ_EryC1  DegT/DnrJ/EryC1/StrS aminotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.0   1.6e-08   5.6e-05      53     144 ..     108     216 ..      70     217 .. 0.78

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 1.6e-08
                      HHHHHTTTTTT-EEEEESSS-THHHHHHHHTT-EEEEE-...........B-TTTSSB-GGGCGGG--TTEEEEE...EB-GGGB--...-HHH CS
  DegT_DnrJ_EryC1  53 laLralgvgpgdeVIvpsltFvatanavlelgakpvfvD...........vdpdtynidpaaieaaitertkaIl...pVhlyGqva...dmda 129
                       +  a  ++pgdeVI     F   ++ v+ +g +pv+v            v ++ + +d ++++aait++tk I+   p + +G+v+   ++++
       EPX70710.1 108 YSVFAAYLNPGDEVILMEPFFDQYVSNVQMNGGVPVYVPmippkegaehpVSAKEWKLDMNRLRAAITNKTKMIVintPHNPLGKVFseeELNE 201
                      555567789*****************************72222222223356789*******************833356789**996667888 PP

                      HHHHHHHCT-EEEEE CS
  DegT_DnrJ_EryC1 130 lkaiaakhglkvieD 144
                      + +i  kh+l v++D
       EPX70710.1 202 IADIVLKHNLLVVSD 216
                      888888******999 PP

>> Beta_elim_lyase  Beta-eliminating lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   2.9e-08    0.0001     106     167 ..     153     216 ..     109     351 .. 0.78

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 2.9e-08
                      T.........TBE-HHHHHHHS--S-TTS-EEEEEEEESSBTTTTTB---HHHHHHHHHHHHHCT-EEEEE CS
  Beta_elim_lyase 106 a.........GkmdlekleaaikevgaheekiklisltvTnntagGqvvsleelrevaaiakkygiplhlD 167
                                 k+d+++l+aai++      k+k+i++ + +n   G+v s eel+e+a+i+ k+++ ++ D
       EPX70710.1 153 GaehpvsakeWKLDMNRLRAAITN------KTKMIVINTPHNP-LGKVFSEEELNEIADIVLKHNLLVVSD 216
                      145555555589***********9......699*****99995.8***********************999 PP

>> Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.1   2.9e-07     0.001     125     175 ..     165     218 ..      91     230 .. 0.81

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 2.9e-07
                      TSHHHHHHHCCTTEEEEEEESS-TTTT---...-HHHHHHHHHHTT-EEEEEGT CS
  Cys_Met_Meta_PP 125 sdleelekaikentklvylEtptnpllkvv...DiekiaklakkagvlvvvDnt 175
                       d+++l++ai+++tk++ + tp npl kv     +++ia+++ k+++lvv D +
       EPX70710.1 165 LDMNRLRAAITNKTKMIVINTPHNPLGKVFseeELNEIADIVLKHNLLVVSDEV 218
                      57899*********************99964447999*********99998875 PP

>> Aminotran_5  Aminotransferase class-V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.1   1.5e-06    0.0055      61     176 ..      94     217 ..      47     220 .. 0.68

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1.5e-06
                  GGGEEEESSHHHHHHHHHHHCCCC-TTTSEEEEET...TSHGGGT.......HHHHHHHHHHTEEEEEEEBETTSCBEGGGHHHH--TTEEEEEEESB CS
  Aminotran_5  61 eeeiiftsGtteainlvalslarslkpgdeivvte...aehhanl.......vpwqelakrtgakvkvipldeegeldldelekllnektklvaithv 148
                  + ei++t G+ e++  v  ++   l+pgde+++ e     + +n+       v   ++  ++ga+       +e++ld+++l++++++ktk++ i+  
   EPX70710.1  94 DTEIVVTAGANEGFYSVFAAY---LNPGDEVILMEpffDQYVSNVqmnggvpVYVPMIPPKEGAEH--PVSAKEWKLDMNRLRAAITNKTKMIVINTP 186
                  468888888888888888888...888888887652222233332111111122233444444432..223468999********************* PP

                  ETTTTEB-...-HHHHHHHHHHTT-EEEEE- CS
  Aminotran_5 149 snvtGtiq...pveeigklakkkgalvlvDa 176
                   n +G ++   +++ei++++ k++ lv+ D 
   EPX70710.1 187 HNPLGKVFseeELNEIADIVLKHNLLVVSDE 217
                  *****98622256666777778899998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (421 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       563  (0.0314016); expected 358.6 (0.02)
Passed bias filter:                      544  (0.0303419); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.58u 0.28s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 2781.88
//
Query:       EPX70711.1  [L=306]
Description: Ino80 complex subunit Ies2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-25   89.3   6.2    2.1e-25   89.3   6.2    3.5  4  PAPA-1    PAPA-1-like conserved region


Domain annotation for each model (and alignments):
>> PAPA-1  PAPA-1-like conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1      0.83   1.5e+04      43      47 ..      11      15 ..       3      31 .. 0.42
   2 ?   -2.8   6.4      0.65   1.2e+04      47      64 ..      80      97 ..      64     113 .. 0.53
   3 ?   -1.0   1.3      0.18   3.3e+03       7      15 ..     109     117 ..     102     154 .. 0.52
   4 !   89.3   6.2   1.2e-29   2.1e-25       1      85 [.     208     299 ..     208     300 .. 0.79

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 0.83
                X..XX CS
      PAPA-1 43 kkkak 47
                +k+++
  EPX70711.1 11 EKPSR 15
                21111 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.65
                XXXXXXXXXXXXXXXXXX CS
      PAPA-1 47 kaaaeaeeeeeeaeeaer 64
                ++a+e+eeeeee+ee+++
  EPX70711.1 80 EEAEEDEEEEEEEEEESN 97
                223333333333333333 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 0.18
                 HHHHHHHHH CS
      PAPA-1   7 aEmarrRkn 15 
                   +a +Rk 
  EPX70711.1 109 DRNASKRKV 117
                 333333332 PP

  == domain 4  score: 89.3 bits;  conditional E-value: 1.2e-29
                 XXXXHHHHHHHHHHHHHHHHHHHHHHXHHHHHHXXXXXXXXXX.........XXXXXXXXXXXXXXXXXXX--S-EEEEE-SS-EEEE--GG CS
      PAPA-1   1 EqalrraEmarrRknqsekrleeekaeTInkLLkkqagkkkkkkk.......akaaaeaeeeeeeaeeaerpapliRwvsnkdGsvlavpee 85 
                 E+alrr E+arrRknqsek+leeek+eTIn+LLk+q++  k ++        ++  a ++  ++ + ++++p ++iRwv+nk+Gs+ ++p++
  EPX70711.1 208 EMALRRVENARRRKNQSEKKLEEEKMETINRLLKRQSNTDKPRRGraptlaqEDIGAPKKVIKKPKVSMHQPFQCIRWVNNKEGSRAIIPDS 299
                 99*************************************99998777655433333333333333444444555****************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (306 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2062  (0.115009); expected 358.6 (0.02)
Passed bias filter:                      614  (0.0342462); expected 358.6 (0.02)
Passed Vit filter:                       137  (0.00764125); expected 17.9 (0.001)
Passed Fwd filter:                        65  (0.00362541); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.30u 0.39s 00:00:01.69 Elapsed: 00:00:00.56
# Mc/sec: 1639.28
//
Query:       EPX70712.1  [L=124]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      4e-06   27.0   0.1    4.6e-06   26.8   0.1    1.2  1  Neugrin   Neugrin
     0.0013   18.9   0.3     0.0025   18.0   0.3    1.5  1  MRP-L20   Mitochondrial ribosomal protein subunit L20
  ------ inclusion threshold ------
      0.038   14.6   0.0      0.061   14.0   0.0    1.3  1  HTH_32    Homeodomain-like domain


Domain annotation for each model (and alignments):
>> Neugrin  Neugrin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.1   7.7e-10   4.6e-06       6      66 ..      63     122 ..      38     124 .] 0.88

  Alignments for each domain:
  == domain 1  score: 26.8 bits;  conditional E-value: 7.7e-10
     Neugrin   6 aPeRrLtWeaieqiRYLkeefpeeWtvprLaeGFdvstDvirRvlkskfvPtlerklkqDa 66 
                  P+++L  + +++iR Lk++ p + t   L + + vs++ irR+lk+    ++er lk  +
  EPX70712.1  63 NPKKKLPLDSMNEIRQLKKDDP-SLTCSVLGNLYGVSPESIRRILKASNRVPTERELKRKQ 122
                 69******************99.689********************665555566666543 PP

>> MRP-L20  Mitochondrial ribosomal protein subunit L20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.3   4.2e-07    0.0025      82     140 ..      65     121 ..      35     124 .] 0.78

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 4.2e-07
     MRP-L20  82 kkyhltkedieeirrLraeDPekwsrkkLakkFgcsklfvsmvteapkekkkeveaele 140
                 k  +l  +  +eir+L+++DP   + + L + +g+s+  ++ +++a++   +e+e +++
  EPX70712.1  65 K-KKLPLDSMNEIRQLKKDDPS-LTCSVLGNLYGVSPESIRRILKASNRVPTERELKRK 121
                 3.47888899***********7.69*********************9876666554443 PP

>> HTH_32  Homeodomain-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0     1e-05     0.061      16      73 .]      53     106 ..      46     106 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1e-05
      HTH_32  16 gLkdrprrg.rpr.klsdevrariiallreeprWsprqlaarlaeregvkvShstvyriL 73 
                 +Lk + ++g  p+ kl+ + + +i++l +++p ++++ l   l     + vS+++++riL
  EPX70712.1  53 ALKKKVQGGwNPKkKLPLDSMNEIRQLKKDDPSLTCSVLGN-L-----YGVSPESIRRIL 106
                 566666667877768*************8899999966666.7.....79*********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       542  (0.0302304); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.28s 00:00:00.69 Elapsed: 00:00:00.44
# Mc/sec: 845.33
//
Query:       EPX70713.1  [L=441]
Description: ubiquitin-protein ligase E3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    9.4e-47  160.7  10.1    2.3e-46  159.5  10.1    1.6  1  SPX           SPX domain
    2.7e-06   27.6   9.2    5.8e-06   26.5   9.2    1.6  1  zf-RING_2     Ring finger domain
    7.1e-06   25.8   7.8    1.4e-05   24.8   7.8    1.5  1  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
    2.1e-05   24.6  11.3    3.2e-05   24.0   9.8    2.2  2  zf-C3HC4_4    zinc finger of C3HC4-type, RING
    3.3e-05   23.6   9.0    8.4e-05   22.3   9.0    1.8  1  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
    4.1e-05   23.4   9.8    0.00011   22.0   9.8    1.8  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
    0.00034   20.4   7.7     0.0007   19.4   7.7    1.5  1  Prok-RING_4   Prokaryotic RING finger family 4
    0.00048   20.1   8.4     0.0016   18.4   8.4    2.0  1  zf-RING_UBOX  RING-type zinc-finger
     0.0019   18.1   8.8     0.0059   16.5   8.9    1.9  1  zf-RING_5     zinc-RING finger domain
  ------ inclusion threshold ------
       0.01   15.6   2.4       0.03   14.1   2.4    1.7  1  zf-RING_4     RING/Ubox like zinc-binding domain
      0.017   15.0   3.4      0.054   13.4   3.4    1.8  1  zf-RING_6     zf-RING of BARD1-type protein
       0.13   12.6   9.2       0.65   10.3   9.2    2.1  1  zf-rbx1       RING-H2 zinc finger domain
        0.2   11.8   3.9       0.13   12.3   1.7    1.9  2  zf-ANAPC11    Anaphase-promoting complex subunit 11 RING-H2 f
       0.37   11.0   5.4       0.76   10.0   3.9    2.2  2  zf-RING_10    zinc RING finger of MSL2


Domain annotation for each model (and alignments):
>> SPX  SPX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.5  10.1   1.8e-49   2.3e-46      13     384 .]       3     307 ..       1     307 [. 0.77

  Alignments for each domain:
  == domain 1  score: 159.5 bits;  conditional E-value: 1.8e-49
         SPX  13 pEWrdaYldYkqLKKlIkkvqreleslgleaetlrellnrpedskkksse...rtepstsaaadesgnsaadasssepkdeae....slprrsplsrss 104
                 p W +a+++Yk+LKK+Ik+ + el slgl+aet r+l ++++d+++ + +   + ++  ++  ++   + + ++        +    + +  ++ls ss
  EPX70713.1   3 PGWSEAAIQYKALKKCIKRFVYELSSLGLSAETIRHLISSSDDEQQRAITmtySLAKEGHVVVPKIVVNINFDKL-------KdddfAASMVKQLSASS 94 
                 88***************************************9999877665553333333333333322222111.......01111333333333444 PP

         SPX 105 rssssygglvssppsansssssddssesnpadssssssssesesssssspsllrrlfsesesreeksersyetrplraekeFferLdseLnkvetFyka 203
                 +   s+++ +s+  + n +++s+                          +++l++ f + +s + +se +  + +l+ ++eFf+ L+ eL++ve ++++
  EPX70713.1  95 NIADSFQSPTSQTFQINEQNGSN--------------------------NHILNNKFAQVHSYTKDSEVHQMELLLNFDHEFFKKLTTELQNVEHLQQQ 167
                 44444444444444444444444..........................44444444545666777777777899************************ PP

         SPX 204 keeefterlesLrkqleal.rprrikeaeerksdlyrwreifglksveaqvfessreldrgelseeardkevseelekngwikptksklekkrnerale 301
                 ++e + + +++L ++++   +p   k    + ++ly wr if l+ ++a +f ss+e +++                                +er+ e
  EPX70713.1 168 QREILHNAFDNLTHDISLTaSPVSKK----HYNSLYCWRTIFKLY-MDADIFMSSKEVEGN--------------------------------RERSPE 229
                 *******************7776555....44789**********.**************5................................899999 PP

         SPX 302 kvkpektlkafldsvrrdylrkenrvklkkakkklkkafvelYrgLelLKsYqeLNrtAFrKIlKKfDKvtaltaskrymkev 384
                  +  ++ l++f ++vr++ ++     + k+   +l ++fvel+r+L+++  +q++N++A++KIlKKfDK+t+lta+  ++k +
  EPX70713.1 230 LA--QRHLNWFDQQVRKSRCLP---SSTKHRDWILYNQFVELNRNLLKMTFFQSMNKLAVTKILKKFDKRTSLTAQPLFFKVI 307
                 99..******************...55555555*********************************************99875 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   9.2   4.5e-09   5.8e-06       2      44 .]     341     381 ..     340     381 .. 0.81

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 4.5e-09
   zf-RING_2   2 eCpICleelssadsvlllpCgHvfhreClerwlrssst..CPlCr 44 
                 eC+IC +++  a+++++l C+Hvf+ +Cl   l++++   CPlCr
  EPX70713.1 341 ECAIC-SNI--AYKPVRLGCSHVFCLHCLII-LQRQKVnlCPLCR 381
                 8****.566..57777788*********966.66666679****9 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   7.8   1.1e-08   1.4e-05       2      45 ..     339     382 ..     338     384 .. 0.94

  Alignments for each domain:
  == domain 1  score: 24.8 bits;  conditional E-value: 1.1e-08
                 GSB-TTTSSSBS-EEETTEEEEEE-HHHHHHHHH.TT-B-TTT-- CS
  zf-C3HC4_3   2 deeCviClerprnvvllpCgHlvlCeeCaekllk.rkkkCpiCrr 45 
                 d eC iC +   + v l C H+ +C +C+  l++ + + Cp+Cr+
  EPX70713.1 339 DFECAICSNIAYKPVRLGCSHV-FCLHCLIILQRqKVNLCPLCRA 382
                 679*******************.*********99999*******7 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       3.9     5e+03      23      34 ..      17      28 ..      16      32 .. 0.79
   2 !   24.0   9.8   2.5e-08   3.2e-05       1      42 []     342     380 ..     342     380 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 3.9
  zf-C3HC4_4 23 sCisslqkepdg 34
                +Ci+++  e ++
  EPX70713.1 17 KCIKRFVYELSS 28
                7****9988776 PP

  == domain 2  score: 24.0 bits;  conditional E-value: 2.5e-08
  zf-C3HC4_4   1 CPiCldYLekPvsleCGhsfClsCisslqkepdgeqllCplC 42 
                 C iC++   kPv l C h+fCl+C+  lq ++ +   lCplC
  EPX70713.1 342 CAICSNIAYKPVRLGCSHVFCLHCLIILQRQKVN---LCPLC 380
                 9****************************99966...7***9 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   9.0   6.6e-08   8.4e-05       1      40 []     341     380 ..     341     380 .. 0.85

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 6.6e-08
  zf-C3HC4_2   1 kCpiCldmlkdpsvvtpCgHvfCqkCilrsLeekn..eCPlC 40 
                 +C+iC +  ++p v   C HvfC  C+   L++++   CPlC
  EPX70713.1 341 ECAICSNIAYKP-VRLGCSHVFCLHCLII-LQRQKvnLCPLC 380
                 6***********.7779*********998.4444436***** PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   9.8   8.3e-08   0.00011       1      41 []     342     380 ..     342     380 .. 0.93

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 8.3e-08
                 -TTT-S--SS-E.E-TTS--B-CHHHHHHHHCTSSB-.-TTT CS
    zf-C3HC4   1 CpiCleeakepnelleCkHsfCskCirkilksrkkvk.CPlC 41 
                 C+iC + a +p+  l C H fC +C+  +++  +kv+ CPlC
  EPX70713.1 342 CAICSNIAYKPV-RLGCSHVFCLHCLIILQR--QKVNlCPLC 380
                 ************.*************99999..66666**** PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   7.7   5.5e-07    0.0007       1      39 [.     342     383 ..     342     388 .. 0.87

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 5.5e-07
  Prok-RING_4   1 CvlCgeqekkailepCgHlvCkeCf...dskdlssCPlCqrr 39 
                  C +C++   k++   C H++C +C+   + ++ + CPlC+ +
   EPX70713.1 342 CAICSNIAYKPVRLGCSHVFCLHCLiilQRQKVNLCPLCRAE 383
                  99**********************7333667888*****976 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   8.4   1.3e-06    0.0016       1      34 [.     342     373 ..     342     382 .. 0.78

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 1.3e-06
  zf-RING_UBOX   1 CpIClelftdPlv.lpCGHtFCreClwelsksleg 34 
                   C IC +   +P v l+C+H+FC +Cl  + +++ +
    EPX70713.1 342 CAICSNIAYKP-VrLGCSHVFCLHCL-IILQRQ-K 373
                   ******999**.758***********.333333.3 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   8.9   4.6e-06    0.0059       2      43 ..     342     381 ..     341     382 .. 0.91

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 4.6e-06
   zf-RING_5   2 CnkCfeklskeekfyltsCgHifCekClkkll.ekeavCpiCr 43 
                 C +C++      k++ + C+H+fC +Cl  l+ +k + Cp+Cr
  EPX70713.1 342 CAICSNIA---YKPVRLGCSHVFCLHCLIILQrQKVNLCPLCR 381
                 88999888...89999****************999999****9 PP

>> zf-RING_4  RING/Ubox like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   2.4   2.4e-05      0.03      20      45 ..     357     382 ..     354     383 .. 0.94

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2.4e-05
   zf-RING_4  20 CgyqiClfCyhrileeeegrCPaCre 45 
                 C + +Cl C+  +++++ + CP Cr 
  EPX70713.1 357 CSHVFCLHCLIILQRQKVNLCPLCRA 382
                 99*********9999**********7 PP

>> zf-RING_6  zf-RING of BARD1-type protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   3.4   4.2e-05     0.054       9      36 ..     341     367 ..     336     390 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 4.2e-05
   zf-RING_6   9 rcsrctdilrepvclggcehifcsncis 36 
                  c+ c++i  +pv l gc h+fc  c+ 
  EPX70713.1 341 ECAICSNIAYKPVRL-GCSHVFCLHCLI 367
                 69************9.5*********74 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   9.2   0.00051      0.65      26      55 .]     352     381 ..     338     381 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00051
     zf-rbx1  26 pvvlGeCgHaFHlhCiskWlkt.rkvCPlcr 55 
                 pv l  C+H+F lhC+    ++  + CPlcr
  EPX70713.1 352 PVRL-GCSHVFCLHCLIILQRQkVNLCPLCR 381
                 4555.6*********99888885577****8 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       7.5   9.5e+03      62      74 ..     235     247 ..     234     251 .. 0.86
   2 ?   12.3   1.7    0.0001      0.13      50      80 ..     356     383 ..     338     388 .. 0.78

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 7.5
                 HHHHHHHSTSSB- CS
  zf-ANAPC11  62 lkwletetskglc 74 
                 l+w++++  k++c
  EPX70713.1 235 LNWFDQQVRKSRC 247
                 58****9999999 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 0.0001
                 BTTS-EEEHHHHHHHHHHHSTSSB-TTTSSB CS
  zf-ANAPC11  50 Gkckhnfhlhcilkwletetskglcpmcrqt 80 
                 G c+h+f lhc++  + +++  +lcp+cr +
  EPX70713.1 356 G-CSHVFCLHCLI--ILQRQKVNLCPLCRAE 383
                 3.*********97..44566678******76 PP

>> zf-RING_10  zinc RING finger of MSL2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       1.8   2.3e+03      37      61 ..     122     146 ..     115     158 .. 0.74
   2 ?   10.0   3.9   0.00059      0.76       2      41 ..     341     381 ..     340     399 .. 0.71

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 1.8
  zf-RING_10  37 kpsCsqCkdyekyeenkqlrlllqC 61 
                 + + +q ++y+k +e +q++lll+ 
  EPX70713.1 122 NNKFAQVHSYTKDSEVHQMELLLNF 146
                 5566677889999999999999974 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00059
  zf-RING_10   2 sCvvCckLLvdPlepkekeCqHyvCrlCv....gkkkklkpsCs 41 
                  C++C+++    ++p +  C H  C  C+    ++k +l p C+
  EPX70713.1 341 ECAICSNIA---YKPVRLGCSHVFCLHCLiilqRQKVNLCPLCR 381
                 5999*9996...5666789*********7332245555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (441 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1082  (0.0603492); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.56u 0.29s 00:00:00.85 Elapsed: 00:00:00.46
# Mc/sec: 2863.54
//
Query:       EPX70714.1  [L=376]
Description: Co-chaperone for ATPase activity [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.6e-21   76.2   2.3    2.5e-21   75.6   0.3    2.2  2  DnaJ         DnaJ domain
      2e-07   31.1   7.4    4.5e-07   30.0   7.4    1.6  1  zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
    6.9e-06   26.3   1.2    6.9e-06   26.3   1.2    2.0  2  zf-C2H2_2    C2H2 type zinc-finger (2 copies)
    2.9e-05   24.3   4.1    6.2e-05   23.3   4.1    1.6  1  zf-met       Zinc-finger of C2H2 type
  ------ inclusion threshold ------
      0.055   13.5   4.0      0.063   13.3   2.6    1.8  2  zf-C2H2_6    C2H2-type zinc finger
       0.06   13.8   4.9        1.5    9.3   1.0    3.3  2  zf-C2HE      C2HE / C2H2 / C2HC zinc-binding finger
      0.079   13.8   0.6      0.079   13.8   0.6    1.9  2  zf-C2H2_4    C2H2-type zinc finger
      0.092   13.4   2.3       0.16   12.6   0.5    2.3  2  BIR          Inhibitor of Apoptosis domain
       0.14   12.7   1.8       0.41   11.2   1.8    1.9  1  zf-C2H2      Zinc finger, C2H2 type


Domain annotation for each model (and alignments):
>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.6   0.3   1.3e-24   2.5e-21       1      61 [.       9      69 ..       9      71 .. 0.97
   2 ?   -1.0   0.1      0.97   1.9e+03      29      60 ..     200     232 ..     193     234 .. 0.71

  Alignments for each domain:
  == domain 1  score: 75.6 bits;  conditional E-value: 1.3e-24
                HHHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHHHHHHHHHHHHHHHHHHTSHHHHHH CS
        DnaJ  1 dyYeiLgvskdasedeIkkaYrklalkyHPDknpkdpeaeekFkeineAyevLsdpekRkq 61
                d+YeiL+vs+d++ +e+k +Yrklal yHPD+np+++  +e F  i+ Ay++Ls+++kRk+
  EPX70714.1  9 DCYEILQVSRDSTLQEVKTSYRKLALLYHPDRNPNKEGYDEIFSAISSAYNILSNEDKRKW 69
                79*********************************************************97 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.97
                 STTTSCCHH.HHHHHHHHHHHHHHHHTSHHHHH CS
        DnaJ  29 HPDknpkdp.eaeekFkeineAyevLsdpekRk 60 
                  P +++ ++ +  e+++ +++A    s+ ++Rk
  EPX70714.1 200 DPRRQNVQKvSDPERYESLQAASRQQSERDRRK 232
                 566665566688899999999988877766664 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   7.4   2.3e-10   4.5e-07       4      27 .]     279     302 ..     278     302 .. 0.97

  Alignments for each domain:
  == domain 1  score: 30.0 bits;  conditional E-value: 2.3e-10
                  BTTTTBBBSSHHHHHCCTTSHHHH CS
  zf-C2H2_jaz   4 CvlCdKyFksenaldnHlkSKkHK 27 
                  C +C+K+F s ++l+nH++SKkHK
   EPX70714.1 279 CFICSKQFRSLQQLKNHENSKKHK 302
                  ***********************9 PP

>> zf-C2H2_2  C2H2 type zinc-finger (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1       2.9   5.7e+03      50      60 ..     174     185 ..     165     207 .. 0.66
   2 !   26.3   1.2   3.5e-09   6.9e-06      23      93 ..     250     319 ..     232     326 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 2.9
   zf-C2H2_2  50 kleCl.yCekef 60 
                 +l+C+ yC ++ 
  EPX70714.1 174 NLRCIkYCTQQY 185
                 566754676663 PP

  == domain 2  score: 26.3 bits;  conditional E-value: 3.5e-09
   zf-C2H2_2  23 hgffipereylvdleglleylrekieekleClyCekefkslealreHmkkkgHckineeeeeekkeiekfy 93 
                  +++ +e+e +v+ + +    +e   ++ +C++C+k+f+sl++l++H ++k+H++ + + ++++++ +k+ 
  EPX70714.1 250 QELNWSEDEDIVEDDDVSIDDTEAA-DNTNCFICSKQFRSLQQLKNHENSKKHKQNSRKARKQQEKEAKLA 319
                 5566666777776666544444444.459**************************8887777766666555 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   4.1   3.1e-08   6.2e-05       3      25 .]     279     301 ..     277     301 .. 0.97

  Alignments for each domain:
  == domain 1  score: 23.3 bits;  conditional E-value: 3.1e-08
      zf-met   3 CelCnvtfnsesqlksHlqGKkH 25 
                 C +C ++f s +qlk+H ++KkH
  EPX70714.1 279 CFICSKQFRSLQQLKNHENSKKH 301
                 99********************* PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       3.3   6.7e+03      10      16 ..     214     220 ..     213     220 .. 0.85
   2 ?   13.3   2.6   3.2e-05     0.063       3      22 ..     278     298 ..     277     303 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 3.3
   zf-C2H2_6  10 sFpslqa 16 
                 +++slqa
  EPX70714.1 214 RYESLQA 220
                 799***8 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 3.2e-05
   zf-C2H2_6   3 eCsvCsksFpslqaLggHk.k 22 
                 +C +Csk+F+slq L  H  +
  EPX70714.1 278 NCFICSKQFRSLQQLKNHEnS 298
                 799************999743 PP

>> zf-C2HE  C2HE / C2H2 / C2HC zinc-binding finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.1     0.022        45      23      44 ..     160     182 ..     138     192 .. 0.76
   2 ?    9.3   1.0   0.00075       1.5      36      57 ..     275     295 ..     215     301 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.022
     zf-C2HE  23 slseeqskelilktpLkCt.rCg 44 
                    ++ +k+l++k++L+C  +C 
  EPX70714.1 160 EETDPATKRLMKKENLRCIkYCT 182
                 345678899*********73566 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00075
     zf-C2HE  36 tpLkCtrCganfgnkfpkLKeH 57 
                 ++  C+ C+ ++++++++LK H
  EPX70714.1 275 DNTNCFICS-KQFRSLQQLKNH 295
                 4558*****.9*********** PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0         9   1.8e+04       5      10 ..     180     185 ..     179     186 .. 0.70
   2 ?   13.8   0.6     4e-05     0.079       2      22 ..     278     298 ..     277     300 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 9
   zf-C2H2_4   5 iCgksF 10 
                 +C++ +
  EPX70714.1 180 YCTQQY 185
                 898776 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 4e-05
   zf-C2H2_4   2 kCpiCgksFsskkaLlrHlkt 22 
                  C iC+k F+s ++L++H ++
  EPX70714.1 278 NCFICSKQFRSLQQLKNHENS 298
                 599***************876 PP

>> BIR  Inhibitor of Apoptosis domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       2.4   4.8e+03      35      48 ..     170     184 ..     148     188 .. 0.71
   2 ?   12.6   0.5     8e-05      0.16      16      67 ..     253     306 ..     231     309 .. 0.71

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 2.4
         BIR  35 eskdnvqCf.yCkla 48 
                  +k+n++C+ yC+++
  EPX70714.1 170 MKKENLRCIkYCTQQ 184
                 456778886678776 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 8e-05
         BIR  16 akpsaeeLaeaGFyytptseskdnvqCfyCklaldgwee..dDdpleeHkkhsp 67 
                 ++ + e+++e   +  + +e  dn++Cf+C++++++ ++  + +  ++Hk++s+
  EPX70714.1 253 NWSEDEDIVEDDDVSIDDTEAADNTNCFICSKQFRSLQQlkNHENSKKHKQNSR 306
                 455556666666677777899************999876214466778887765 PP

>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   1.8   0.00021      0.41       3      22 ..     279     298 ..     277     301 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00021
                 ETTTTEEESSHHHHHHHHHC CS
     zf-C2H2   3 CpdCgksFkrksnLkrHirt 22 
                 C +C+k F++  +Lk+H ++
  EPX70714.1 279 CFICSKQFRSLQQLKNHENS 298
                 9****************876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (376 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2576  (0.143678); expected 358.6 (0.02)
Passed bias filter:                      574  (0.0320152); expected 358.6 (0.02)
Passed Vit filter:                        75  (0.00418317); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 2662.77
//
Query:       EPX70715.1  [L=69]
Description: hypothetical protein SOCG_04241 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-08   34.0   0.1    2.1e-08   33.6   0.1    1.2  1  Rsa3      Ribosome-assembly protein 3


Domain annotation for each model (and alignments):
>> Rsa3  Ribosome-assembly protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.6   0.1   1.2e-12   2.1e-08      15      45 ..      38      68 ..      37      69 .] 0.97

  Alignments for each domain:
  == domain 1  score: 33.6 bits;  conditional E-value: 1.2e-12
        Rsa3 15 dDLDelRkapdFkdksLplLidaLkqGtnlF 45
                ++LD+lR+++ F +++L++Li+ L++G++++
  EPX70715.1 38 EELDTLRQKEIFDQRKLQMLIEGLRAGHKIY 68
                79****************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       316  (0.0176251); expected 358.6 (0.02)
Passed bias filter:                      240  (0.0133861); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.25s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 516.16
//
Query:       EPX70716.1  [L=327]
Description: tRNA m(1)G methyltransferase Trm10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.3e-41  141.6   0.1    3.6e-41  141.0   0.1    1.3  1  tRNA_m1G_MT  tRNA (Guanine-1)-methyltransferase


Domain annotation for each model (and alignments):
>> tRNA_m1G_MT  tRNA (Guanine-1)-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.0   0.1     2e-45   3.6e-41       1     195 []     109     278 ..     109     278 .. 0.98

  Alignments for each domain:
  == domain 1  score: 141.0 bits;  conditional E-value: 2e-45
                  GGGSHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEETSSHHHHHHHHHHHCCGHHCGG-TTEEEESSCGGHHHHCCCHHHCGGGEEEEETTTSSBECCG CS
  tRNA_m1G_MT   1 lkkasekelvslevqllrdytanrrntvddelygggagmvlkaepelealesvntekwkvilltptGkkftqelaeeLsekeklvylcgdyegvderv 98 
                  +++++eke+ sl++q +r+++anr++ ++ + +++ +g +l+a+++++ + +++  +w+++++tp+  ++ +e  e   ek+k+vyl++d+++++ ++
   EPX70716.1 109 DDLMNEKEIASLCQQFTRCHSANRTALHPVKFCATSFGGRLEARQDYVLRGQQK--NWSRYHPTPK--SYLEEFPE---EKKKMVYLSADSDETLHEL 199
                  579************************************************986..**********..*******9...******************* PP

                  GTTSSEEEEEESSSSTTCSTTHHHHHHHHHHHHTTTC.EEB-S-CCC...CHCTS..CTTSEHHTEHHHHHHHHHCCCTTTHHHHHHHHHHHSCSXS CS
  tRNA_m1G_MT  99 dddkvdeysIGdfVlkggekgalvlidavkrllaGvlntaslpedsfsnrllekpnytrpltlrglkVpeiLlsgnhakienWrlkealertvprRk 195
                  ++d   +y+IG +V+k+++k++    +  k++++G+  ta+lp+ ++   + + +  +++lt++  +V+eiL+ + +  +++W  ++a+++ +p+Rk
   EPX70716.1 200 KEDE--IYIIGALVDKNRYKNI----CDDKAKSQGIR-TAKLPIGEY---IRMSD--RKVLTVN--HVFEILSLWLE--HRDW--EKAFMEIIPKRK 278
                  ****..****************....***********.*********...99999..9******..***********..****..***********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2302  (0.128395); expected 358.6 (0.02)
Passed bias filter:                      686  (0.038262); expected 358.6 (0.02)
Passed Vit filter:                        75  (0.00418317); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.30s 00:00:00.87 Elapsed: 00:00:00.46
# Mc/sec: 2129.88
//
Query:       EPX70717.1  [L=449]
Description: DNA primase catalytic subunit Spp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.5e-68  228.5   0.0    7.5e-68  228.0   0.0    1.2  1  DNA_primase_S  DNA primase small subunit


Domain annotation for each model (and alignments):
>> DNA_primase_S  DNA primase small subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  228.0   0.0   4.2e-72   7.5e-68       1     177 []     130     362 ..     130     362 .. 0.99

  Alignments for each domain:
  == domain 1  score: 228.0 bits;  conditional E-value: 4.2e-72
                    EEEEEETTT-.....TT--HHHHHHHHHHHHHHHHHHHH-----GGGEEEEE--SEEEEEEE--TTEEES-HHHHHHHHHH............... CS
  DNA_primase_S   1 FDiDmddydd....cseatvcekcwkfvsvavkvldellredfgfkdilwvfsgrrGfHcwvsdkdarpltdeeraaivnylnly........... 81 
                    FDiDm+dydd    cs++++cekcw f++va++++d +lredfgf++ilwv+sgrrG+H+w++d++ar+++d+ r+ i+ yl+++           
     EPX70717.1 130 FDIDMTDYDDvrtcCSKTNICEKCWSFITVAAQIIDVALREDFGFNHILWVYSGRRGIHAWICDETARSMDDRSRKMIAGYLQVVtgnpqggvril 225
                    9************************************************************************************9********** PP

                    ......................................HCHHHHCT--------.......................................... CS
  DNA_primase_S  82 ....rplhpflsrsmlkivkpvveeiileeqdpf....eikkllrllpdkslre..kkkw................................eake 135
                        rplhp+l+rs l+i+k v+ + +le+qdp+    + ++ll+llp++sl++  +kkw                                 ak+
     EPX70717.1 226 nnlkRPLHPHLTRS-LDILKSVFAKVVLEDQDPWssqeGSESLLKLLPNESLASalRKKWevdpgrssikkwsdidaaiasgsfnispnviaHAKQ 320
                    **************.*****************************************************************************99** PP

                    ..........-----------------....---------.. CS
  DNA_primase_S 136 divlvllyprldeqvtkgikhllkapfcihgktgnvcvpldv 177
                    divl++lyprld++v+k+ +hllk+pfc+h++tg+vcvp+d+
     EPX70717.1 321 DIVLTYLYPRLDVEVSKHLNHLLKSPFCVHPGTGRVCVPIDI 362
                    ****************************************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (449 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       647  (0.0360868); expected 358.6 (0.02)
Passed bias filter:                      484  (0.0269954); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 3032.24
//
Query:       EPX70718.1  [L=359]
Description: DNA replication checkpoint protein Drc1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.6e-36  125.1  49.4    3.1e-23   83.0  24.9    3.5  2  Drc1-Sld2      DNA replication and checkpoint protein
  ------ inclusion threshold ------
      0.051   14.2   0.2         14    6.4   0.3    2.5  2  Fe-S_assembly  Iron-sulphur cluster assembly
       0.71   10.0   3.0        4.1    7.6   0.5    2.6  2  YojJ           Bacterial membrane-spanning protein N-terminus


Domain annotation for each model (and alignments):
>> Drc1-Sld2  DNA replication and checkpoint protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.0  24.9   5.2e-27   3.1e-23       2     196 ..      11     179 ..      10     194 .. 0.71
   2 !   42.6  22.1   9.7e-15   5.8e-11     232     450 .]     160     359 .]     152     359 .] 0.67

  Alignments for each domain:
  == domain 1  score: 83.0 bits;  conditional E-value: 5.2e-27
   Drc1-Sld2   2 sqLraelKeWEraFaakngrkpsreDIKknpeIaakYkeYskLkakesqskkdkkpsksvkleerpkkrkhesteepkeeqknnststprkskkaiaaT 100
                 ++L+ +lK+WE++F ++ +rkp+++D+K+np I+ +YkeY kLk+k           k  +  ++p+k+++ + e+p       + +tp+k  k     
  EPX70718.1  11 QKLKIRLKTWEHEFSHNQNRKPTKQDVKSNPSISLLYKEYYKLKQKV---------AKGDDKTSTPRKKNEGTLEQP-------EFRTPTKIRKI---- 89 
                 79********************************************9.........222233455666665555556.......78999999986.... PP

   Drc1-Sld2 101 PskshpsevdpydsPsvlrr.lf.sPst..kaalGPTPQrdGkvLgLFDllsespksspskskerkaslsgsav........qtpskrraldinaeedr 187
                        e++p  ++++ ++ l  +P+   k+ lGPTPQ + +v+++F+  s  p+ s ++s+  ++s+ + a         +tpskr    +n     
  EPX70718.1  90 -------EKHPFEQRTPTSKpLElTPKSadKSLLGPTPQLSRRVINIFEDISPNPSPSGKTSQIAETSVLSIAEtslqsmtpTTPSKRIRPSMN----- 176
                 .......66777666665541446**9999*********************8888877777764444444444445566556677776433333..... PP

   Drc1-Sld2 188 tpassgkkl 196
                         +
  EPX70718.1 177 ------LSS 179
                 ......333 PP

  == domain 2  score: 42.6 bits;  conditional E-value: 9.7e-15
   Drc1-Sld2 232 eseTPsflrrknsarlptvdease...........fdlspsplrkpqrlvgkglsaivqelrdieeeklddeldllremEaeeeqaelddvedsqasea 319
                 +s TP + +++ +++++ ++++s             + sp  lr ++r   k+ls+++qel+die++  +de  +l e+E+ e++++ ++  +++ s++
  EPX70718.1 160 QSMTPTTPSKRIRPSMNLSSPSSAifdtpttyrteVPSSPNFLRVSSR-CRKSLSEMIQELKDIEDDYGNDEERILAEVEENENSSSFSE--SEENSAQ 255
                 555666666666455555555555555555677667889**9*88888.67*****************************9988888887..4444567 PP

   Drc1-Sld2 320 eegrvrkkkgqkrttRrvkmkPvteeeeededekknsedeldklpetqrkaeklddelseredseededsdsdeeseseptakaksfkekakkkkkakk 418
                 e++r++k+ ++kr++R vk++               ++ +ld +pe  ++     +e  ++ +++e++++++ +  e +p    +++ +  k++ k+  
  EPX70718.1 256 ESARPFKR-KIKRQNRLVKLN--------------AEKSHLDSMPEIDEE-----EEATAGDIDHEEQEENNPNMIEGSPSN--NVDLQDSKRRLKNGL 332
                 77788876.59********99..............356788888888333.....333233333333333332222222222..333333444557777 PP

   Drc1-Sld2 419 kkvkkvstNyrrLKirnkgakgrakgRfrrRR 450
                    k+vs+Ny+++K+++   kg++   fr RR
  EPX70718.1 333 LLGKQVSQNYSSYKLNRG--KGKN---FRSRR 359
                 78899999*******999..8887...55554 PP

>> Fe-S_assembly  Iron-sulphur cluster assembly
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0    0.0064        38      23      54 ..      46      77 ..      37      78 .. 0.84
   2 ?    6.4   0.3    0.0023        14      29      55 ..     211     237 ..     208     240 .. 0.90

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.0064
  Fe-S_assembly 23 ltvrFtdLhewvleLpefdddpeksnEkiLEa 54
                   l   + +L++ v + ++ + +p k nE+ LE+
     EPX70718.1 46 LYKEYYKLKQKVAKGDDKTSTPRKKNEGTLEQ 77
                   55567899***********************7 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0023
  Fe-S_assembly  29 dLhewvleLpefdddpeksnEkiLEaI 55 
                     L e++ eL++ +dd  + +E+iL  +
     EPX70718.1 211 SLSEMIQELKDIEDDYGNDEERILAEV 237
                    599********************9665 PP

>> YojJ  Bacterial membrane-spanning protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.5   0.00069       4.1      13      45 ..     207     239 ..     200     255 .. 0.87
   2 ?    2.0   0.1     0.037   2.2e+02       4      36 ..     255     291 ..     250     304 .. 0.67

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.00069
        YojJ  13 klkeeLeqiekeleevlkaldeedeClLceles 45 
                   ++ L++ ++el+++ +   +++e++L e e+
  EPX70718.1 207 RCRKSLSEMIQELKDIEDDYGNDEERILAEVEE 239
                 56899*************************996 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.037
        YojJ   4 kcleeelkeklkeeLeqiekeleev....lkaldeed 36 
                 + ++ ++k+k+k++ + ++ ++e++    + ++dee+
  EPX70718.1 255 QESARPFKRKIKRQNRLVKLNAEKShldsMPEIDEEE 291
                 567889******9988887777654211144555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (359 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1265  (0.0705561); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.46
# Mc/sec: 2357.54
//
Query:       EPX70719.1  [L=630]
Description: TOM complex subunit Tom70 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.3e-30  102.6  18.6    8.4e-06   25.4   0.0   10.1 10  TPR_1            Tetratricopeptide repeat
    5.9e-29   97.8  18.7      5e-05   23.1   0.0   10.5 10  TPR_2            Tetratricopeptide repeat
    8.6e-18   63.0  25.1      0.039   14.2   0.0   11.3 11  TPR_8            Tetratricopeptide repeat
    1.4e-15   56.7  19.1    9.3e-06   25.2   0.4    7.3  7  TPR_11           TPR repeat
    1.8e-14   53.7  11.1     0.0046   17.2   0.8    7.1  6  TPR_12           Tetratricopeptide repeat
    1.9e-13   49.8   4.8      0.067   13.6   0.1    8.0  7  TPR_17           Tetratricopeptide repeat
    1.5e-11   44.7  13.9     0.0021   18.5   2.6    6.2  7  TPR_19           Tetratricopeptide repeat
    2.6e-11   43.3   8.1       0.81   10.7   0.0    8.1  7  TPR_14           Tetratricopeptide repeat
      1e-10   42.1  15.9      0.024   15.3   0.1    6.9  6  TPR_16           Tetratricopeptide repeat
      1e-06   28.4  17.5      0.019   15.0   0.3    7.4  7  TPR_7            Tetratricopeptide repeat
    1.6e-06   27.8   1.1    0.00026   20.5   2.7    2.8  2  TPR_MalT         MalT-like TPR region
    8.8e-06   25.1   2.2      0.021   14.3   0.1    3.9  4  SHNi-TPR         SHNi-TPR
    1.2e-05   25.5  18.8      0.029   14.6   0.3    5.6  6  ANAPC3           Anaphase-promoting complex, cyclosome, subun
    2.9e-05   23.8  12.4        0.2   11.6   0.1    6.1  7  TPR_10           Tetratricopeptide repeat
    5.8e-05   23.2   2.8      0.058   13.6   0.0    4.3  4  TPR_9            Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.022   14.7  15.6          2    8.5   0.3    6.3  6  TPR_3            Tetratricopeptide repeat
      0.033   14.8  14.7       0.68   10.7   0.0    6.9  6  TPR_6            Tetratricopeptide repeat
      0.038   14.6   0.5         42    5.2   0.0    4.5  4  TPR_4            Tetratricopeptide repeat
      0.059   13.8   4.7        5.4    7.5   0.0    3.5  3  Alkyl_sulf_dimr  Alkyl sulfatase dimerisation
        0.9    8.2   9.4        1.4    7.6   9.4    1.3  1  Presenilin       Presenilin
        2.1    7.3  16.5        3.8    6.5  16.5    1.3  1  BAF1_ABF1        BAF1 / ABF1 chromatin reorganising factor
        2.9    6.1  15.7        5.4    5.2  15.7    1.3  1  CDC45            CDC45-like protein
        3.4    6.6   9.4        5.5    5.9   9.4    1.3  1  SLC12            Solute carrier family 12
        5.6    6.7  16.2         10    5.9  16.2    1.4  1  RR_TM4-6         Ryanodine Receptor TM 4-6
        6.2    6.9  15.9         17    5.5  15.9    1.7  1  DUF2052          Coiled-coil domain containing protein (DUF20


Domain annotation for each model (and alignments):
>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.1   8.3e-06    0.0059       4      29 ..     159     184 ..     156     188 .. 0.89
   2 !   23.7   0.0   3.9e-08   2.8e-05       4      34 .]     192     222 ..     189     222 .. 0.95
   3 ?    4.0   0.0     0.067        48       2      21 ..     224     243 ..     223     245 .. 0.88
   4 ?    0.6   0.7       0.8   5.8e+02      12      29 ..     325     342 ..     321     344 .. 0.84
   5 ?    1.4   0.0      0.45   3.2e+02       1      33 [.     352     384 ..     352     385 .. 0.87
   6 !   25.4   0.0   1.2e-08   8.4e-06       2      33 ..     421     452 ..     420     453 .. 0.93
   7 ?    1.6   0.1      0.38   2.7e+02       2      27 ..     455     480 ..     454     487 .. 0.81
   8 !   14.7   0.0   2.7e-05      0.02       3      31 ..     490     518 ..     488     520 .. 0.87
   9 !    8.7   0.0    0.0022       1.6      11      34 .]     539     562 ..     537     562 .. 0.90
  10 !    8.6   0.2    0.0024       1.7       7      31 ..     569     593 ..     565     596 .. 0.87

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 8.3e-06
                 HHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_1   4 lynlGnayfklgkydeAleyyekALe 29 
                 l+ lGn  + +++y  A+++y++A++
  EPX70719.1 159 LKTLGNKAYGQKEYANAIDFYSQAIT 184
                 7789********************97 PP

  == domain 2  score: 23.7 bits;  conditional E-value: 3.9e-08
                 HHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   4 lynlGnayfklgkydeAleyyekALelnPnn 34 
                 + n++++y   g++++ +++  +AL+l+P++
  EPX70719.1 192 FSNRAACYAAIGDFEQVVKDTTEALKLDPTY 222
                 68***************************97 PP

  == domain 3  score: 4.0 bits;  conditional E-value: 0.067
                 HHHHHHHHHHHHTT-HHHHH CS
       TPR_1   2 kalynlGnayfklgkydeAl 21 
                 kal+++  ay +l+k+d+Al
  EPX70719.1 224 KALNRRSSAYEQLEKLDDAL 243
                 78888889***********8 PP

  == domain 4  score: 0.6 bits;  conditional E-value: 0.8
                 HHTT-HHHHHHHHHHHHH CS
       TPR_1  12 fklgkydeAleyyekALe 29 
                 + +g+y+ A +  +kA++
  EPX70719.1 325 LDKGDYQLAYDQAKKAVT 342
                 578*******99999986 PP

  == domain 5  score: 1.4 bits;  conditional E-value: 0.45
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1   1 akalynlGnayfklgkydeAleyyekALelnPn 33 
                 a+a++ +G   f  g+ +   + +++A+ l+ +
  EPX70719.1 352 ARAYNLIGTFKFVSGDSKGSMDEFNEAINLDSS 384
                 789999999999999999999999999999976 PP

  == domain 6  score: 25.4 bits;  conditional E-value: 1.2e-08
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALelnPn 33 
                 + +y +++++f  g++ eA+++y+k + l+ +
  EPX70719.1 421 DLYYHRAQVHFVSGEFAEAIADYNKSIALDDS 452
                 78***************************966 PP

  == domain 7  score: 1.6 bits;  conditional E-value: 0.38
                 HHHHHHHHHHHHTT-HHHHHHHHHHH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekA 27 
                 +++ +lG+a +k + +++  + +e +
  EPX70719.1 455 YSYIQLGVAQYKIQALNQSMKTFEDC 480
                 5799********99999998888765 PP

  == domain 8  score: 14.7 bits;  conditional E-value: 2.7e-05
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHS CS
       TPR_1   3 alynlGnayfklgkydeAleyyekALeln 31 
                 +++  G +++ ++k+ eA+e +++A++++
  EPX70719.1 490 VYNYFGEILLDQQKFAEAVENFDRAISIE 518
                 5666699*******************986 PP

  == domain 9  score: 8.7 bits;  conditional E-value: 0.0022
                 HHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1  11 yfklgkydeAleyyekALelnPnn 34 
                 ++ +++ ++A+  +++AL+ +P++
  EPX70719.1 539 FQWKKDIKQAESLCRQALSADPDC 562
                 67899*****************96 PP

  == domain 10  score: 8.6 bits;  conditional E-value: 0.0024
                 HHHHHHHTT-HHHHHHHHHHHHHHS CS
       TPR_1   7 lGnayfklgkydeAleyyekALeln 31 
                 +++ ++++gk +eAl y+e+  +l 
  EPX70719.1 569 MAQFLLQQGKAQEALSYFEQSAQLA 593
                 678899**************99886 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.1   0.00014     0.099       3      28 ..     158     183 ..     156     187 .. 0.90
   2 !   17.8   0.0   3.4e-06    0.0025       3      34 .]     191     222 ..     189     222 .. 0.93
   3 ?    5.5   0.0     0.031        22       2      21 ..     224     243 ..     223     243 .. 0.93
   4 ?    1.7   0.4       0.5   3.6e+02       9      28 ..     322     341 ..     320     344 .. 0.85
   5 ?    2.7   0.0      0.23   1.7e+02       1      31 [.     352     382 ..     352     385 .. 0.90
   6 !   23.1   0.0     7e-08     5e-05       2      32 ..     421     451 ..     420     453 .. 0.94
   7 ?    1.0   0.0      0.83   5.9e+02       3      33 ..     456     486 ..     454     487 .. 0.88
   8 !   17.1   0.0     6e-06    0.0043       2      31 ..     489     518 ..     488     520 .. 0.93
   9 ?    5.8   0.0     0.024        17      14      33 ..     542     561 ..     537     562 .. 0.89
  10 !   12.5   0.3   0.00017      0.12       7      32 ..     569     594 ..     565     596 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 0.00014
       TPR_2   3 alynlGlayyklgdyeeAleafekAl 28 
                  l  lG+ +y +++y+ A++++ +A+
  EPX70719.1 158 ELKTLGNKAYGQKEYANAIDFYSQAI 183
                 5789*********************8 PP

  == domain 2  score: 17.8 bits;  conditional E-value: 3.4e-06
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldPnn 34 
                    n++ +y++ gd+e+ +++  +Al+ldP++
  EPX70719.1 191 FFSNRAACYAAIGDFEQVVKDTTEALKLDPTY 222
                 5689**************************85 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.031
       TPR_2   2 ealynlGlayyklgdyeeAl 21 
                 +al+++  ay++l ++++Al
  EPX70719.1 224 KALNRRSSAYEQLEKLDDAL 243
                 79****************96 PP

  == domain 4  score: 1.7 bits;  conditional E-value: 0.5
       TPR_2   9 layyklgdyeeAleafekAl 28 
                 + ++ +gdy+ A +  +kA+
  EPX70719.1 322 YDALDKGDYQLAYDQAKKAV 341
                 667899********999997 PP

  == domain 5  score: 2.7 bits;  conditional E-value: 0.23
       TPR_2   1 aealynlGlayyklgdyeeAleafekAleld 31 
                 a+a++ +G   + +gd +   + f++A+ ld
  EPX70719.1 352 ARAYNLIGTFKFVSGDSKGSMDEFNEAINLD 382
                 67899999999999***************98 PP

  == domain 6  score: 23.1 bits;  conditional E-value: 7e-08
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleldP 32 
                 +++y ++++++ +g+++eA+++++k+++ld 
  EPX70719.1 421 DLYYHRAQVHFVSGEFAEAIADYNKSIALDD 451
                 68***************************95 PP

  == domain 7  score: 1.0 bits;  conditional E-value: 0.83
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldPn 33 
                  + +lG a yk + +++  + fe + +  P+
  EPX70719.1 456 SYIQLGVAQYKIQALNQSMKTFEDCKKKFPG 486
                 6899**********99999999999888886 PP

  == domain 8  score: 17.1 bits;  conditional E-value: 6e-06
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleld 31 
                 e++++ G++++ +++++eA+e f++A++++
  EPX70719.1 489 EVYNYFGEILLDQQKFAEAVENFDRAISIE 518
                 7899***********************986 PP

  == domain 9  score: 5.8 bits;  conditional E-value: 0.024
       TPR_2  14 lgdyeeAleafekAleldPn 33 
                 ++d ++A+ ++++Al+ dP+
  EPX70719.1 542 KKDIKQAESLCRQALSADPD 561
                 68999**************8 PP

  == domain 10  score: 12.5 bits;  conditional E-value: 0.00017
       TPR_2   7 lGlayyklgdyeeAleafekAleldP 32 
                 +++ ++++g+ +eAl +fe++ +l+ 
  EPX70719.1 569 MAQFLLQQGKAQEALSYFEQSAQLAR 594
                 68889******************986 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.1      0.19   1.3e+02      14      28 ..     169     183 ..     161     185 .. 0.88
   2 ?    5.0   0.0     0.048        34       6      33 ..     194     221 ..     192     222 .. 0.90
   3 ?    4.2   0.0     0.083        60       2      20 ..     224     242 ..     223     245 .. 0.90
   4 ?    0.9   0.2      0.96   6.9e+02      12      29 ..     325     342 ..     318     344 .. 0.84
   5 ?    6.2   0.0     0.019        14       1      32 [.     352     383 ..     352     385 .. 0.95
   6 ?    5.1   0.0     0.044        32       3      33 ..     388     418 ..     386     419 .. 0.88
   7 !   14.2   0.0   5.4e-05     0.039       2      31 ..     421     450 ..     420     453 .. 0.93
   8 ?    1.8   0.2       0.5   3.6e+02       3      27 ..     456     480 ..     454     482 .. 0.91
   9 !   11.6   0.1   0.00037      0.26       2      32 ..     489     519 ..     488     521 .. 0.90
  10 !    8.5   0.1    0.0036       2.6      14      34 .]     542     562 ..     540     562 .. 0.95
  11 !    9.8   0.2    0.0013      0.95       7      32 ..     569     594 ..     565     596 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.19
                 TT-HHHHHHHHHHHH CS
       TPR_8  14 lgdyeeAkeyyekal 28 
                 +++y +A+ +y +a+
  EPX70719.1 169 QKEYANAIDFYSQAI 183
                 789***********9 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.048
                 HHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   6 nlgsiylklgdyeeAkeyyekaleldpd 33 
                 n + +y   gd+e+ ++   +al+ldp+
  EPX70719.1 194 NRAACYAAIGDFEQVVKDTTEALKLDPT 221
                 5677899********************7 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.083
                 CHHHHHHHHHHHTT-HHHH CS
       TPR_8   2 eayynlgsiylklgdyeeA 20 
                 +a+++ +s+y++l++++ A
  EPX70719.1 224 KALNRRSSAYEQLEKLDDA 242
                 7999***********9988 PP

  == domain 4  score: 0.9 bits;  conditional E-value: 0.96
                 HHTT-HHHHHHHHHHHHH CS
       TPR_8  12 lklgdyeeAkeyyekale 29 
                 l++gdy+ A    +ka++
  EPX70719.1 325 LDKGDYQLAYDQAKKAVT 342
                 689******999999987 PP

  == domain 5  score: 6.2 bits;  conditional E-value: 0.019
                 CCHHHHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   1 aeayynlgsiylklgdyeeAkeyyekaleldp 32 
                 a+ay+++g   +  gd + ++  +++a+ ld 
  EPX70719.1 352 ARAYNLIGTFKFVSGDSKGSMDEFNEAINLDS 383
                 79****************************96 PP

  == domain 6  score: 5.1 bits;  conditional E-value: 0.044
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyekaleldpd 33 
                  y++l+ +yl+ +d++++  +++ka + + +
  EPX70719.1 388 PYVRLSAAYLDENDHDSMWNVLKKAESVNDK 418
                 5999********************9888765 PP

  == domain 7  score: 14.2 bits;  conditional E-value: 5.4e-05
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleld 31 
                 ++yy+ +++++  g++ eA++ y+k + ld
  EPX70719.1 421 DLYYHRAQVHFVSGEFAEAIADYNKSIALD 450
                 68*************************998 PP

  == domain 8  score: 1.8 bits;  conditional E-value: 0.5
                 HHHHHHHHHHHTT-HHHHHHHHHHH CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyeka 27 
                 +y +lg +  k + ++++++++e +
  EPX70719.1 456 SYIQLGVAQYKIQALNQSMKTFEDC 480
                 799********************98 PP

  == domain 9  score: 11.6 bits;  conditional E-value: 0.00037
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldp 32 
                 e+y+  g i+l+++++ eA+e + +a+++++
  EPX70719.1 489 EVYNYFGEILLDQQKFAEAVENFDRAISIEK 519
                 6777789*********************986 PP

  == domain 10  score: 8.5 bits;  conditional E-value: 0.0036
                 TT-HHHHHHHHHHHHHHHHH. CS
       TPR_8  14 lgdyeeAkeyyekaleldpdn 34 
                 ++d+++A++ +++al++dpd+
  EPX70719.1 542 KKDIKQAESLCRQALSADPDC 562
                 689****************96 PP

  == domain 11  score: 9.8 bits;  conditional E-value: 0.0013
                 HHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   7 lgsiylklgdyeeAkeyyekaleldp 32 
                 +++ +l++g+ +eA +y+e+  +l++
  EPX70719.1 569 MAQFLLQQGKAQEALSYFEQSAQLAR 594
                 7999****************999986 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.5    0.0086       6.2       1      39 [.     163     200 ..     163     203 .. 0.76
   2 !    8.8   0.1    0.0018       1.3       8      41 ..     203     236 ..     198     237 .. 0.78
   3 !    8.1   0.0    0.0028         2       8      39 ..     366     397 ..     363     400 .. 0.88
   4 ?    6.3   0.1     0.011       7.9      15      39 ..     407     431 ..     395     434 .. 0.82
   5 !   25.2   0.4   1.3e-08   9.3e-06       7      41 ..     433     467 ..     430     468 .. 0.94
   6 !   11.9   0.0   0.00019      0.14       1      24 [.     495     518 ..     495     520 .. 0.93
   7 ?   -2.7   0.3       6.7   4.8e+03       5      14 ..     574     583 ..     570     593 .. 0.76

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0086
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldPdnaeayynLGlayy 39 
                 G+  y q +y +Ai  Y++A+  +  ++ +++n+++ y+
  EPX70719.1 163 GNKAYGQKEYANAIDFYSQAITCSH-DPIFFSNRAACYA 200
                 67778899*************8554.4667777666666 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.0018
      TPR_11   8 GkyeeAieaYkkAlkldPdnaeayynLGlayykq 41 
                 G++e+ +++  +AlkldP+++ a++ +  ay ++
  EPX70719.1 203 GDFEQVVKDTTEALKLDPTYVKALNRRSSAYEQL 236
                 555555555569*************999999875 PP

  == domain 3  score: 8.1 bits;  conditional E-value: 0.0028
      TPR_11   8 GkyeeAieaYkkAlkldPdnaeayynLGlayy 39 
                 G+ ++++ ++++A++ld+++   y  L +ay+
  EPX70719.1 366 GDSKGSMDEFNEAINLDSSFIQPYVRLSAAYL 397
                 666788899***************99999996 PP

  == domain 4  score: 6.3 bits;  conditional E-value: 0.011
      TPR_11  15 eaYkkAlkldPdnaeayynLGlayy 39 
                 +++kkA   + ++ ++yy+++++++
  EPX70719.1 407 NVLKKAESVNDKDSDLYYHRAQVHF 431
                 789********************97 PP

  == domain 5  score: 25.2 bits;  conditional E-value: 1.3e-08
      TPR_11   7 qGkyeeAieaYkkAlkldPdnaeayynLGlayykq 41 
                  G++ eAi++Y+k ++ld ++   y  LG+a+yk 
  EPX70719.1 433 SGEFAEAIADYNKSIALDDSFIYSYIQLGVAQYKI 467
                 69*******************************95 PP

  == domain 6  score: 11.9 bits;  conditional E-value: 0.00019
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkld 24 
                 G ++ +q+k+ eA+e++ +A+ + 
  EPX70719.1 495 GEILLDQQKFAEAVENFDRAISIE 518
                 889******************985 PP

  == domain 7  score: -2.7 bits;  conditional E-value: 6.7
      TPR_11   5 yeqGkyeeAi 14 
                  +qGk  eA+
  EPX70719.1 574 LQQGKAQEAL 583
                 6899999998 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.1      0.13        91      48      72 ..     159     183 ..     148     187 .. 0.65
   2 ?    4.0   0.1     0.083        59       8      65 ..     194     243 ..     189     245 .. 0.68
   3 ?    1.9   0.0      0.39   2.8e+02      14      73 ..     325     380 ..     317     384 .. 0.71
   4 !   10.2   0.0     0.001      0.72       5      33 ..     422     450 ..     418     479 .. 0.87
   5 !   16.5   0.0   1.1e-05    0.0076       5      75 ..     490     559 ..     487     561 .. 0.92
   6 !   17.2   0.8   6.4e-06    0.0046       5      35 ..     567     595 ..     562     609 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.13
      TPR_12  48 lrnLgrlyralgryeeAlelleeal 72 
                 l +Lg   + +++y+ A++++ +a+
  EPX70719.1 159 LKTLGNKAYGQKEYANAIDFYSQAI 183
                 5556666666666666666666665 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.083
      TPR_12   8 nlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAl 65 
                 n+aa++++ g++++  +   +al +      p+   ++ +l+  + +y++l+++++Al
  EPX70719.1 194 NRAACYAAIGDFEQVVKDTTEALKLD-----PT---YVKALNRRSSAYEQLEKLDDAL 243
                 66666666666666666666666555.....54...5778888888888888888886 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.39
      TPR_12  14 rrlgrydeAlellekaleiarrllGpdh.pltattlrnLgrlyralgryeeAlelleeala 73 
                 +  g+y+ A +  +ka+ +a     + + p  a++++ +g+  + +g+ +   + ++ea++
  EPX70719.1 325 LDKGDYQLAYDQAKKAVTVA-----CSSpPISARAYNLIGTFKFVSGDSKGSMDEFNEAIN 380
                 56799999999999999998.....334377888888888766666666666666666665 PP

  == domain 4  score: 10.2 bits;  conditional E-value: 0.001
      TPR_12   5 alnnlaavlrrlgrydeAlellekaleia 33 
                 +++++a+v++  g+++eA++ ++k++++ 
  EPX70719.1 422 LYYHRAQVHFVSGEFAEAIADYNKSIALD 450
                 68899999999999999999999998875 PP

  == domain 5  score: 16.5 bits;  conditional E-value: 1.1e-05
      TPR_12   5 alnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyral.gryeeAlelleealaia 75 
                 ++n  +++l+ +++++eA e++++a+ i +r         a  l+n + + +++ ++ ++A++l ++al ++
  EPX70719.1 490 VYNYFGEILLDQQKFAEAVENFDRAISIEKRE--RLTIMSAMPLINKALAVFQWkKDIKQAESLCRQALSAD 559
                 78779************************999..899*************999999***********99865 PP

  == domain 6  score: 17.2 bits;  conditional E-value: 6.4e-06
      TPR_12   5 alnnlaavlrrlgrydeAlellekaleiarr 35 
                 a   +a++l+++g+ +eAl+++e++ ++ar 
  EPX70719.1 567 A--SMAQFLLQQGKAQEALSYFEQSAQLART 595
                 3..49***********************964 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0      0.43   3.1e+02      12      31 ..     188     207 ..     178     210 .. 0.85
   2 !   13.6   0.1   9.3e-05     0.067       4      33 ..     214     243 ..     213     244 .. 0.94
   3 ?    0.8   0.0       1.1     8e+02       2      30 ..     375     403 ..     374     406 .. 0.86
   4 ?    6.2   0.0     0.022        16       9      33 ..     416     440 ..     409     441 .. 0.90
   5 ?    6.3   0.0      0.02        14       2      30 ..     443     474 ..     442     478 .. 0.87
   6 ?    7.2   0.0      0.01       7.3      13      34 .]     488     509 ..     476     509 .. 0.84
   7 ?    6.5   0.1     0.017        12       1      33 [.     551     583 ..     551     584 .. 0.93

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.43
      TPR_17  12 nadaynnLAelllknGdlmt 31 
                 ++ ++ n+A +++ +Gd+++
  EPX70719.1 188 DPIFFSNRAACYAAIGDFEQ 207
                 567788**********9876 PP

  == domain 2  score: 13.6 bits;  conditional E-value: 9.3e-05
      TPR_17   4 kaleldPnnadaynnLAelllknGdlmtAr 33 
                 +al+ldP++++a+n +  +++++ +l++A+
  EPX70719.1 214 EALKLDPTYVKALNRRSSAYEQLEKLDDAL 243
                 79*************************997 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 1.1
      TPR_17   2 ylkaleldPnnadaynnLAelllknGdlm 30 
                 + +a+ ld +   +y  L  ++l  +d++
  EPX70719.1 375 FNEAINLDSSFIQPYVRLSAAYLDENDHD 403
                 789*******************9776654 PP

  == domain 4  score: 6.2 bits;  conditional E-value: 0.022
      TPR_17   9 dPnnadaynnLAelllknGdlmtAr 33 
                 + +++d+y+ +A+++   G++++A+
  EPX70719.1 416 NDKDSDLYYHRAQVHFVSGEFAEAI 440
                 6689*****************9997 PP

  == domain 5  score: 6.3 bits;  conditional E-value: 0.02
      TPR_17   2 ylkaleldPnnadaynnLAelll...knGdlm 30 
                 y k+++ld +  ++y +L+++++    ++++m
  EPX70719.1 443 YNKSIALDDSFIYSYIQLGVAQYkiqALNQSM 474
                 99*******************88577667777 PP

  == domain 6  score: 7.2 bits;  conditional E-value: 0.01
      TPR_17  13 adaynnLAelllknGdlmtArq 34 
                 +++yn+ +e+ll + ++++A++
  EPX70719.1 488 SEVYNYFGEILLDQQKFAEAVE 509
                 89***************99975 PP

  == domain 7  score: 6.5 bits;  conditional E-value: 0.017
      TPR_17   1 lylkaleldPnnadaynnLAelllknGdlmtAr 33 
                 l+++al  dP+   a   +A++ll++G+ ++A+
  EPX70719.1 551 LCRQALSADPDCDIAIASMAQFLLQQGKAQEAL 583
                 6899999999999******************96 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.0      0.01       7.2       2      43 ..     167     207 ..     166     210 .. 0.86
   2 ?    4.6   0.1     0.067        48       5      44 ..     203     242 ..     201     243 .. 0.90
   3 ?   -1.4   0.0       4.7   3.4e+03       1      18 [.     324     341 ..     324     349 .. 0.80
   4 !   11.9   0.0   0.00033      0.24       4      46 ..     399     441 ..     396     451 .. 0.87
   5 ?    6.2   0.0     0.021        15      19      51 ..     482     514 ..     467     524 .. 0.64
   6 ?    5.2   0.1     0.043        31       1      21 [.     498     518 ..     498     543 .. 0.81
   7 !   18.5   2.6   2.9e-06    0.0021       5      53 ..     543     591 ..     541     602 .. 0.86

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.01
      TPR_19   2 laegdyaeAlalleqalqedpknaearllLAeallalgqlde 43 
                 + ++ ya+A+++++qa+    +++    + A ++ a g++++
  EPX70719.1 167 YGQKEYANAIDFYSQAI-TCSHDPIFFSNRAACYAAIGDFEQ 207
                 7899***********95.458899999999999999999987 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.067
      TPR_19   5 gdyaeAlalleqalqedpknaearllLAeallalgqldeA 44 
                 gd+++ ++  ++al+ dp +  a+ +   a+ +l  ld+A
  EPX70719.1 203 GDFEQVVKDTTEALKLDPTYVKALNRRSSAYEQLEKLDDA 242
                 677777777789***************************9 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 4.7
      TPR_19   1 llaegdyaeAlalleqal 18 
                 +l+ gdy+ A +  ++a 
  EPX70719.1 324 ALDKGDYQLAYDQAKKAV 341
                 578899999988888775 PP

  == domain 4  score: 11.9 bits;  conditional E-value: 0.00033
      TPR_19   4 egdyaeAlalleqalqedpknaearllLAeallalgqldeAea 46 
                 e+d+++  + l++a + + k++++ +  A++++ +g+++eA+a
  EPX70719.1 399 ENDHDSMWNVLKKAESVNDKDSDLYYHRAQVHFVSGEFAEAIA 441
                 55555555789999999************************86 PP

  == domain 5  score: 6.2 bits;  conditional E-value: 0.021
      TPR_19  19 qedpknaearllLAeallalgqldeAealLdal 51 
                 ++ p+ +e+  +  e+ll +  ++eA +  d++
  EPX70719.1 482 KKFPGCSEVYNYFGEILLDQQKFAEAVENFDRA 514
                 556666666666666666666666666655554 PP

  == domain 6  score: 5.2 bits;  conditional E-value: 0.043
      TPR_19   1 llaegdyaeAlalleqalqed 21 
                 ll+++++aeA++ + +a++ +
  EPX70719.1 498 LLDQQKFAEAVENFDRAISIE 518
                 79**************98774 PP

  == domain 7  score: 18.5 bits;  conditional E-value: 2.9e-06
      TPR_19   5 gdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpe 53 
                 +d  +A +l +qal++dp+ + a + +A+ ll++g  +eA    ++  +
  EPX70719.1 543 KDIKQAESLCRQALSADPDCDIAIASMAQFLLQQGKAQEALSYFEQSAQ 591
                 5899***************8888888**************987776655 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0      0.34   2.5e+02       8      38 ..     196     226 ..     193     231 .. 0.86
   2 ?    0.7   0.0       1.8   1.3e+03       3      21 ..     225     243 ..     223     244 .. 0.85
   3 !    8.5   0.0    0.0056       4.1       4      43 ..     389     428 ..     386     429 .. 0.93
   4 !   10.7   0.0    0.0011      0.81       2      33 ..     421     452 ..     420     463 .. 0.86
   5 ?    6.4   0.0     0.026        18       8      33 ..     495     520 ..     472     528 .. 0.88
   6 ?    5.9   0.1      0.04        29      14      34 ..     542     562 ..     534     567 .. 0.82
   7 !    9.5   0.8    0.0027       1.9       5      36 ..     567     598 ..     563     607 .. 0.86

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.34
      TPR_14   8 aeallalGdpdeAiallrralalaPddaeaw 38 
                 a+ ++a Gd+++ ++   +al+l+P+   a+
  EPX70719.1 196 AACYAAIGDFEQVVKDTTEALKLDPTYVKAL 226
                 6778999******************998776 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 1.8
      TPR_14   3 allalaeallalGdpdeAi 21 
                 al ++ +a+++l+++d+A+
  EPX70719.1 225 ALNRRSSAYEQLEKLDDAL 243
                 7778999*********996 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.0056
      TPR_14   4 llalaeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 + +l +a+l   d+d + ++l++a + + +d +++++ aq
  EPX70719.1 389 YVRLSAAYLDENDHDSMWNVLKKAESVNDKDSDLYYHRAQ 428
                 568899*****************************99998 PP

  == domain 4  score: 10.7 bits;  conditional E-value: 0.0011
      TPR_14   2 eallalaeallalGdpdeAiallrralalaPd 33 
                 ++++ +a++++ +G+++eAia +++ +al+ +
  EPX70719.1 421 DLYYHRAQVHFVSGEFAEAIADYNKSIALDDS 452
                 5899*********************9998765 PP

  == domain 5  score: 6.4 bits;  conditional E-value: 0.026
      TPR_14   8 aeallalGdpdeAiallrralalaPd 33 
                 +e+ll +++++eA++ ++ra++    
  EPX70719.1 495 GEILLDQQKFAEAVENFDRAISIEKR 520
                 789******************98765 PP

  == domain 6  score: 5.9 bits;  conditional E-value: 0.04
      TPR_14  14 lGdpdeAiallrralalaPdd 34 
                   d ++A+ l+r+al+++Pd 
  EPX70719.1 542 KKDIKQAESLCRQALSADPDC 562
                 57899**************96 PP

  == domain 7  score: 9.5 bits;  conditional E-value: 0.0027
      TPR_14   5 lalaeallalGdpdeAiallrralalaPddae 36 
                 + +a++ll++G+ +eA+ ++++  +la ++ae
  EPX70719.1 567 ASMAQFLLQQGKAQEALSYFEQSAQLARTEAE 598
                 679*******************9998877665 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0      0.33   2.4e+02      44      62 ..     166     184 ..     162     189 .. 0.80
   2 ?    6.2   0.1     0.023        17       8      54 ..     200     243 ..     194     246 .. 0.89
   3 ?    5.8   0.0     0.031        22       4      60 ..     321     378 ..     318     384 .. 0.81
   4 !   15.3   0.1   3.4e-05     0.024       6      61 ..     395     447 ..     391     452 .. 0.77
   5 !    7.7   0.0     0.008       5.8       4      24 ..     495     515 ..     482     524 .. 0.74
   6 !    9.9   0.9    0.0016       1.2      12      63 ..     544     592 ..     533     597 .. 0.89

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.33
      TPR_16  44 alrqgrlaeAaalyraalr 62 
                 a+ q+++a A+++y  a++
  EPX70719.1 166 AYGQKEYANAIDFYSQAIT 184
                 7899**********99975 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.023
      TPR_16   8 lragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAa 54 
                 ++ gd+++ ++  ++alk+d   P  + Al+ +  a+ ++  l++A+
  EPX70719.1 200 AAIGDFEQVVKDTTEALKLD---PTYVKALNRRSSAYEQLEKLDDAL 243
                 566888888899999*****...**********************97 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.031
      TPR_16   4 araalragdyddAaaal.eaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraa 60 
                 a++al+ gdy+ A  ++ +a++ + +s+P  a+A++l g   ++ g+ ++  + +++a
  EPX70719.1 321 AYDALDKGDYQLAYDQAkKAVTVACSSPPISARAYNLIGTFKFVSGDSKGSMDEFNEA 378
                 899***********99966777777888889***999999888888888888666666 PP

  == domain 4  score: 15.3 bits;  conditional E-value: 3.4e-05
      TPR_16   6 aalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraal 61 
                 a+l+ +d d   ++l+ a   +     + + ++++++++++ g++aeA+a y++ +
  EPX70719.1 395 AYLDENDHDSMWNVLKKAESVN---DKDSDLYYHRAQVHFVSGEFAEAIADYNKSI 447
                 5666666666667777777777...55677*******************8888765 PP

  == domain 5  score: 7.7 bits;  conditional E-value: 0.008
      TPR_16   4 araalragdyddAaaaleaal 24 
                 + ++l+++++++A++ +++a+
  EPX70719.1 495 GEILLDQQKFAEAVENFDRAI 515
                 556778888888888888776 PP

  == domain 6  score: 9.9 bits;  conditional E-value: 0.0016
      TPR_16  12 dyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalra 63 
                 d  +A+ + ++al +d   Pd+  A    ++ +l+qg  +eA+ +++  ++ 
  EPX70719.1 544 DIKQAESLCRQALSAD---PDCDIAIASMAQFLLQQGKAQEALSYFEQSAQL 592
                 677999999*******...************************998877655 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0      0.38   2.7e+02      14      29 ..     171     184 ..     168     189 .. 0.84
   2 ?    2.4   0.0      0.28     2e+02       3      30 ..     193     218 ..     192     223 .. 0.78
   3 ?   -1.7   0.1       5.5   3.9e+03       1      18 [.     225     242 ..     225     243 .. 0.78
   4 ?    5.6   0.0     0.025        18       3      31 ..     424     452 ..     422     453 .. 0.84
   5 ?    6.5   0.0     0.014       9.9       2      31 ..     491     520 ..     490     523 .. 0.83
   6 ?    2.7   0.0      0.21   1.5e+02      14      32 ..     544     560 ..     534     564 .. 0.78
   7 !   15.0   0.3   2.6e-05     0.019       2      34 ..     566     598 ..     565     600 .. 0.88

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.38
       TPR_7  14 dyeeAielyeqsLalt 29 
                 +y++Ai++y q  a+t
  EPX70719.1 171 EYANAIDFYSQ--AIT 184
                 89*******99..665 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.28
       TPR_7   3 lnLarlysrlGdyeeAielyeqsLaltk 30 
                 +n a +y + Gd+e+ ++  ++  al  
  EPX70719.1 193 SNRAACYAAIGDFEQVVKDTTE--ALKL 218
                 578999*********9987777..4444 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 5.5
       TPR_7   1 aLlnLarlysrlGdyeeA 18 
                 aL++  ++y++l + ++A
  EPX70719.1 225 ALNRRSSAYEQLEKLDDA 242
                 577777899999999988 PP

  == domain 4  score: 5.6 bits;  conditional E-value: 0.025
       TPR_7   3 lnLarlysrlGdyeeAielyeqsLaltkd 31 
                 +  a++++  G+++eAi  y +s+al+++
  EPX70719.1 424 YHRAQVHFVSGEFAEAIADYNKSIALDDS 452
                 5668888889************9999875 PP

  == domain 5  score: 6.5 bits;  conditional E-value: 0.014
       TPR_7   2 LlnLarlysrlGdyeeAielyeqsLaltkd 31 
                 +++ +++  ++++++eA+e + +++ ++k+
  EPX70719.1 491 YNYFGEILLDQQKFAEAVENFDRAISIEKR 520
                 5666999****************7766665 PP

  == domain 6  score: 2.7 bits;  conditional E-value: 0.21
       TPR_7  14 dyeeAielyeqsLaltkdp 32 
                 d ++A++l++q  al  dp
  EPX70719.1 544 DIKQAESLCRQ--ALSADP 560
                 6689*******..766666 PP

  == domain 7  score: 15.0 bits;  conditional E-value: 2.6e-05
       TPR_7   2 LlnLarlysrlGdyeeAielyeqsLaltkdped 34 
                 +  +a+   ++G+ +eA++++eqs +l++ + +
  EPX70719.1 566 IASMAQFLLQQGKAQEALSYFEQSAQLARTEAE 598
                 6789*******************9999988765 PP

>> TPR_MalT  MalT-like TPR region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0      0.14     1e+02      11      85 ..     324     398 ..     320     418 .. 0.74
   2 !   20.5   2.7   3.7e-07   0.00026      85     210 ..     493     612 ..     464     625 .. 0.77

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.14
    TPR_MalT  11 aiasgdaeralelArqALallpeddllariaatavlGeasllqGdleaAlqalqeaekl.arqadslhvallallq 85 
                 a+ +gd + a ++A++A++   ++  + ++ a+ ++G+  ++ Gd + + + ++ea+ l +  ++ + +   a+l+
  EPX70719.1 324 ALDKGDYQLAYDQAKKAVTVACSSP-PISARAYNLIGTFKFVSGDSKGSMDEFNEAINLdSSFIQPYVRLSAAYLD 398
                 778999999*********9988887.5555666777*****************99998634555555555555555 PP

  == domain 2  score: 20.5 bits;  conditional E-value: 3.7e-07
    TPR_MalT  85 qqaeilvaqGrLheAletyeqalqlateqglqqlplvgfllvlladllyEw.ndLeeAeqhlqeGielleqlepeaaldayvllarialaqGdleeAet 182
                 + +eil  q ++ eA+e + +a+   ++++l+   ++ ++l+  a   + w  d ++Ae  +++++       p++ + a + +a+  l+qG+++eA++
  EPX70719.1 493 YFGEILLDQQKFAEAVENFDRAISIEKRERLTI--MSAMPLINKALAVFQWkKDIKQAESLCRQALSAD----PDCDI-AIASMAQFLLQQGKAQEALS 584
                 5689********************888888886..6666666666555555269***********5544....44444.3356888999********** PP

    TPR_MalT 183 llekaeelaresnfhvdwlanaeevrvr 210
                 ++e+  +lar++   v + + ae++r +
  EPX70719.1 585 YFEQSAQLARTEAEMVNAFSYAEATRTQ 612
                 *********9988655555444444433 PP

>> SHNi-TPR  SHNi-TPR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       5.4   3.9e+03      15      22 ..     177     184 ..     176     184 .. 0.86
   2 ?    1.2   0.0      0.35   2.5e+02      17      30 ..     205     218 ..     202     219 .. 0.94
   3 !    6.3   0.1    0.0093       6.7      14      30 ..     433     449 ..     427     450 .. 0.86
   4 !   14.3   0.1   2.9e-05     0.021       1      30 [.     488     517 ..     488     520 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 5.4
    SHNi-TPR  15 enFpqAve 22 
                 ++++qA++
  EPX70719.1 177 DFYSQAIT 184
                 69****97 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.35
    SHNi-TPR  17 FpqAveDlrkaLeL 30 
                 F+q v+D ++aL+L
  EPX70719.1 205 FEQVVKDTTEALKL 218
                 99**********98 PP

  == domain 3  score: 6.3 bits;  conditional E-value: 0.0093
    SHNi-TPR  14 nenFpqAveDlrkaLeL 30 
                 ++ F +A+ D++k+++L
  EPX70719.1 433 SGEFAEAIADYNKSIAL 449
                 6779**********987 PP

  == domain 4  score: 14.3 bits;  conditional E-value: 2.9e-05
    SHNi-TPR   1 AdvydlLGEislEnenFpqAveDlrkaLeL 30 
                 ++vy+  GEi l + +F +Ave++++a+ +
  EPX70719.1 488 SEVYNYFGEILLDQQKFAEAVENFDRAISI 517
                 79*************************987 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.1      0.65   4.6e+02      32      56 ..     165     188 ..     140     209 .. 0.74
   2 ?    4.1   0.4     0.078        56       2      76 ..     169     243 ..     168     244 .. 0.85
   3 ?    3.5   0.1      0.11        82      29      55 ..     320     347 ..     304     355 .. 0.81
   4 !   14.6   0.3     4e-05     0.029      18      81 ..     414     479 ..     398     480 .. 0.84
   5 ?    2.5   0.2      0.24   1.8e+02      34      81 ..     465     513 ..     454     514 .. 0.70
   6 !   10.5   1.3   0.00076      0.55       3      51 ..     543     592 ..     532     619 .. 0.71

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.65
                 HHHHTT-HHHHHHHHHCTSHHHC-H CS
      ANAPC3  32 clylngqykrAyellrkaklnsksl 56 
                   y +++y  A++++++a + +++ 
  EPX70719.1 165 KAYGQKEYANAIDFYSQA-ITCSHD 188
                 568899999999999999.666665 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.078
                 TT-HHHHHHHHHHHH.HHH--HHHHHHH..HHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHH CS
      ANAPC3   2 qnnyknAiflaerllaaetespedayll..AlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAi 76 
                 q+ y nAi +++ +    t s++ +++   A c+   g++++  + + +a kl+++  +++     ++ +L+k+++A+
  EPX70719.1 169 QKEYANAIDFYSQAI---TCSHDPIFFSnrAACYAAIGDFEQVVKDTTEAlKLDPTYVKALNRRSSAYEQLEKLDDAL 243
                 567888888888888...88888888866699******************999999999999999999999**99997 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.11
                 HHHHHHHTT-HHHHHHHHHCT.SHHHC- CS
      ANAPC3  29 lAlclylngqykrAyellrka.klnsks 55 
                  A+  +  g+y+ Ay+ ++ka   +++s
  EPX70719.1 320 SAYDALDKGDYQLAYDQAKKAvTVACSS 347
                 58888999************97766666 PP

  == domain 4  score: 14.6 bits;  conditional E-value: 4e-05
                 HHH--HHHHHHH.HHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH-S CS
      ANAPC3  18 aetespedayll.AlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaLek 81 
                 + ++ ++d+y++ A++++ +g++ +A+  ++k+  l+++ + + + ++ +++k++ +++  +++e 
  EPX70719.1 414 SVNDKDSDLYYHrAQVHFVSGEFAEAIADYNKSiALDDSFIYSYIQLGVAQYKIQALNQSMKTFED 479
                 6677889999999********************888888888889999999999999998888876 PP

  == domain 5  score: 2.5 bits;  conditional E-value: 0.24
                 HHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH-S CS
      ANAPC3  34 ylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaLek 81 
                 y+ +  ++ ++ ++++ k+ +   ++   f++ ll+++k+ eA+  +++
  EPX70719.1 465 YKIQALNQSMKTFEDCkKKFPGCSEVYNYFGEILLDQQKFAEAVENFDR 513
                 5555556666666666666677777777888999999999999988875 PP

  == domain 6  score: 10.5 bits;  conditional E-value: 0.00076
                 T-HHHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SH CS
      ANAPC3   3 nnyknAiflaerllaaetespedayllAlclylngqykrAyellrka.kl 51 
                 +++k A+ l+  +l+a+++ + ++   A+ l+++g+ ++A+ +++++ +l
  EPX70719.1 543 KDIKQAESLCRQALSADPDCDIAIASMAQFLLQQGKAQEALSYFEQSaQL 592
                 55666777777777666666666666788888888888888888887444 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0       1.5   1.1e+03      13      31 ..     167     185 ..     161     187 .. 0.84
   2 ?   -2.8   0.0       9.5   6.8e+03       7      23 ..     201     217 ..     196     220 .. 0.47
   3 ?   -2.5   0.1       7.2   5.2e+03       4      22 ..     225     243 ..     224     244 .. 0.83
   4 ?    1.9   0.0      0.32   2.3e+02       9      30 ..     427     448 ..     422     449 .. 0.86
   5 !   11.6   0.1   0.00027       0.2       5      34 ..     491     520 ..     489     523 .. 0.91
   6 ?    0.3   0.0      0.96   6.9e+02      16      30 ..     543     557 ..     537     558 .. 0.84
   7 !   11.5   0.5   0.00029      0.21       7      33 ..     568     594 ..     565     597 .. 0.89

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 1.5
      TPR_10  13 rqrgrydeAealleealai 31 
                 + +++y+ A +++ +a+ +
  EPX70719.1 167 YGQKEYANAIDFYSQAITC 185
                 789*************987 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 9.5
      TPR_10   7 NLanalrqrgrydeAea 23 
                  ++   + +++ +eA++
  EPX70719.1 201 AIGDFEQVVKDTTEALK 217
                 44444444444555554 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 7.2
      TPR_10   4 slnNLanalrqrgrydeAe 22 
                 +ln  + a+ q+ ++d+A+
  EPX70719.1 225 ALNRRSSAYEQLEKLDDAL 243
                 5777888999999999996 PP

  == domain 4  score: 1.9 bits;  conditional E-value: 0.32
      TPR_10   9 analrqrgrydeAealleeala 30 
                 a +++  g+++eA a++ +++a
  EPX70719.1 427 AQVHFVSGEFAEAIADYNKSIA 448
                 6778889**********99998 PP

  == domain 5  score: 11.6 bits;  conditional E-value: 0.00027
      TPR_10   5 lnNLanalrqrgrydeAealleealairrr 34 
                 +n  + +l ++++++eA++ +++a++i +r
  EPX70719.1 491 YNYFGEILLDQQKFAEAVENFDRAISIEKR 520
                 8999**********************9665 PP

  == domain 6  score: 0.3 bits;  conditional E-value: 0.96
      TPR_10  16 grydeAealleeala 30 
                 ++ ++Ae l+++al+
  EPX70719.1 543 KDIKQAESLCRQALS 557
                 67789********97 PP

  == domain 7  score: 11.5 bits;  conditional E-value: 0.00029
      TPR_10   7 NLanalrqrgrydeAealleealairr 33 
                  +a  l q+g+ +eA+ ++e++ ++ r
  EPX70719.1 568 SMAQFLLQQGKAQEALSYFEQSAQLAR 594
                 57899*****************99977 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0      0.16   1.2e+02       5      45 ..     199     239 ..     186     245 .. 0.50
   2 !   13.6   0.0     8e-05     0.058       2      59 ..     393     450 ..     392     454 .. 0.93
   3 ?   -1.2   0.0       3.3   2.3e+03      40      58 ..     499     517 ..     495     529 .. 0.57
   4 ?    3.0   0.2      0.15   1.1e+02      21      60 ..     555     594 ..     537     613 .. 0.73

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.16
       TPR_9   5 aireedweralavverllllaPddpeerrdRGlllaqlGcl 45 
                 ++   d+e+  +     l l+P  +  +  R  +++ql+ l
  EPX70719.1 199 YAAIGDFEQVVKDTTEALKLDPTYVKALNRRSSAYEQLEKL 239
                 33333444444444444555555555555555555555555 PP

  == domain 2  score: 13.6 bits;  conditional E-value: 8e-05
       TPR_9   2 kaiaireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylala 59 
                  a+++ e+d++ ++ v+     ++ +d ++++ R+++++ +G +++A+ad +  +al+
  EPX70719.1 393 SAAYLDENDHDSMWNVLKKAESVNDKDSDLYYHRAQVHFVSGEFAEAIADYNKSIALD 450
                 6899**********************************************99887776 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 3.3
       TPR_9  40 aqlGclsaAladLeaylal 58 
                   +  +++A++ +++++++
  EPX70719.1 499 LDQQKFAEAVENFDRAISI 517
                 3444555566666555544 PP

  == domain 4  score: 3.0 bits;  conditional E-value: 0.15
       TPR_9  21 llllaPddpeerrdRGlllaqlGclsaAladLeaylalap 60 
                  l  +Pd    +   ++ l q+G  ++Al  +e+ ++la 
  EPX70719.1 555 ALSADPDCDIAIASMAQFLLQQGKAQEALSYFEQSAQLAR 594
                 5555666666666678889999999999999999888775 PP

>> TPR_3  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.3    0.0028         2       4      29 ..     159     182 ..     158     185 .. 0.84
   2 ?   -0.5   0.2       1.8   1.3e+03      13      22 ..     326     335 ..     316     336 .. 0.80
   3 ?    1.6   0.0       0.4   2.9e+02      14      25 ..     372     383 ..     371     389 .. 0.80
   4 ?   -1.5   0.0       3.6   2.6e+03      14      25 ..     501     512 ..     498     513 .. 0.87
   5 ?    3.0   0.0      0.15   1.1e+02       9      23 ..     537     551 ..     537     559 .. 0.89
   6 ?    6.2   0.4     0.014        10      13      32 ..     575     592 ..     573     594 .. 0.88

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0028
                 HHHHHHHHHHTT-HHHHHHH..HHHH CS
       TPR_3   4 lysyAaefynkkkyqeArelfsYall 29 
                 l++++   y +k+y  A++++s  ++
  EPX70719.1 159 LKTLGNKAYGQKEYANAIDFYS--QA 182
                 6777888899**********88..76 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 1.8
                 HTT-HHHHHH CS
       TPR_3  13 nkkkyqeAre 22 
                 +k++yq A++
  EPX70719.1 326 DKGDYQLAYD 335
                 799**99986 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.4
                 TT-HHHHHHH.. CS
       TPR_3  14 kkkyqeArelfs 25 
                 +++++eA++l+s
  EPX70719.1 372 MDEFNEAINLDS 383
                 7899******99 PP

  == domain 4  score: -1.5 bits;  conditional E-value: 3.6
                 TT-HHHHHHH.. CS
       TPR_3  14 kkkyqeArelfs 25 
                 ++k+ eA+e f+
  EPX70719.1 501 QQKFAEAVENFD 512
                 89******9876 PP

  == domain 5  score: 3.0 bits;  conditional E-value: 0.15
                 HHHHHTT-HHHHHHH CS
       TPR_3   9 aefynkkkyqeArel 23 
                 a+f+ kk++ +A+ l
  EPX70719.1 537 AVFQWKKDIKQAESL 551
                 79**********977 PP

  == domain 6  score: 6.2 bits;  conditional E-value: 0.014
                 HTT-HHHHHHH..HHHHHHH CS
       TPR_3  13 nkkkyqeArelfsYallail 32 
                 +++k qeA+ +  ++++a l
  EPX70719.1 575 QQGKAQEALSY--FEQSAQL 592
                 79*********..7799876 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.1       1.7   1.2e+03      11      27 ..     168     183 ..     162     184 .. 0.80
   2 ?   -1.8   0.0         9   6.4e+03       7      15 ..     196     211 ..     194     218 .. 0.52
   3 ?    2.1   0.0      0.52   3.7e+02       3      25 ..     423     445 ..     421     449 .. 0.86
   4 ?   10.7   0.0   0.00094      0.68       2      31 ..     456     485 ..     455     486 .. 0.90
   5 ?    0.8   0.0       1.3   9.7e+02       8      28 ..     496     516 ..     494     517 .. 0.80
   6 ?    3.5   0.6      0.19   1.4e+02       6      25 ..     569     588 ..     565     592 .. 0.81

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 1.7
                 HHHHHHHHHHHHHHHHH CS
       TPR_6  11 rklgdtdkAlealerli 27 
                   ++++++A++ + + i
  EPX70719.1 168 G-QKEYANAIDFYSQAI 183
                 3.569********9987 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 9
                 HHHHHH.H......HH CS
       TPR_6   7 alsyrk.l......gd 15 
                 a +y + +      +d
  EPX70719.1 196 AACYAAiGdfeqvvKD 211
                 6677773344444444 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.52
                 HHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   3 lyklalsyrklgdtdkAlealer 25 
                 +y++a+ ++  g+ ++A++ +++
  EPX70719.1 423 YYHRAQVHFVSGEFAEAIADYNK 445
                 8999*****967******99987 PP

  == domain 4  score: 10.7 bits;  conditional E-value: 0.00094
                 HHHHHHHHHHH.HHHHHHHHHHHHHHHHH-T CS
       TPR_6   2 Alyklalsyrk.lgdtdkAlealerlikeYP 31 
                 ++ +l+ +++k +    ++++++e++ k++P
  EPX70719.1 456 SYIQLGVAQYKiQ-ALNQSMKTFEDCKKKFP 485
                 5679*******66.***************** PP

  == domain 5  score: 0.8 bits;  conditional E-value: 1.3
                 HHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   8 lsyrklgdtdkAlealerlik 28 
                 + ++ +++ ++A+e ++r i+
  EPX70719.1 496 EILLDQQKFAEAVENFDRAIS 516
                 566666699*******99985 PP

  == domain 6  score: 3.5 bits;  conditional E-value: 0.19
                 HHHHHHHHHHHHHHHHHHHH CS
       TPR_6   6 lalsyrklgdtdkAlealer 25 
                 +a+ ++++g++++Al ++e+
  EPX70719.1 569 MAQFLLQQGKAQEALSYFEQ 588
                 455566679*********97 PP

>> TPR_4  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       7.6   5.4e+03       5      19 ..     193     207 ..     191     208 .. 0.88
   2 ?    5.2   0.0     0.059        42       4      20 ..     423     439 ..     421     441 .. 0.90
   3 ?   -1.4   0.0       7.7   5.5e+03       8      21 ..     495     508 ..     495     509 .. 0.86
   4 ?    3.5   0.1       0.2   1.5e+02       7      21 ..     569     583 ..     567     588 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 7.6
       TPR_4   5 laLArallalGdlde 19 
                 +++A  ++a Gd+++
  EPX70719.1 193 SNRAACYAAIGDFEQ 207
                 6899999999**997 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.059
       TPR_4   4 llaLArallalGdldeA 20 
                 ++ +A++++  G+++eA
  EPX70719.1 423 YYHRAQVHFVSGEFAEA 439
                 5789************9 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 7.7
       TPR_4   8 ArallalGdldeAr 21 
                 ++ ll++  ++eA 
  EPX70719.1 495 GEILLDQQKFAEAV 508
                 57899*******97 PP

  == domain 4  score: 3.5 bits;  conditional E-value: 0.2
       TPR_4   7 LArallalGdldeAr 21 
                 +A+ ll++G + eA+
  EPX70719.1 569 MAQFLLQQGKAQEAL 583
                 799***********8 PP

>> Alkyl_sulf_dimr  Alkyl sulfatase dimerisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.3       1.9   1.4e+03      75     115 ..     195     235 ..     106     244 .. 0.63
   2 ?    7.5   0.0    0.0075       5.4      69      98 ..     314     343 ..     261     371 .. 0.78
   3 ?    5.8   0.4     0.025        18      76     123 ..     535     583 ..     515     607 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 1.9
                      HHHHHHHTT-HHHHHHHHHHHHHHSTT-HHHHHHHHHHHHH CS
  Alkyl_sulf_dimr  75 kakealkegdyrwaaellnhlvfadpenaeakelkadaleq 115
                      +a  +++ gd++ +++ +  ++  dp+  +a + + +a+eq
       EPX70719.1 195 RAACYAAIGDFEQVVKDTTEALKLDPTYVKALNRRSSAYEQ 235
                      33333445555555555555555555555555555555555 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0075
                      HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
  Alkyl_sulf_dimr  69 aekvlekakealkegdyrwaaellnhlvfa 98 
                       +++l+ a +al++gdy++a  +++++v+ 
       EPX70719.1 314 GDRILSSAYDALDKGDYQLAYDQAKKAVTV 343
                      5899*********************99986 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.025
                      HHHHH.HTT-HHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHHHHH-SSH CS
  Alkyl_sulf_dimr  76 akeal.kegdyrwaaellnhlvfadpenaeakelkadaleqlgyqaesa 123
                      a + +  ++d++ a +l+ +++ adp+ + a +  a+ l q g+++e+ 
       EPX70719.1 535 ALAVFqWKKDIKQAESLCRQALSADPDCDIAIASMAQFLLQQGKAQEAL 583
                      44444258899******************************99999875 PP

>> Presenilin  Presenilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   9.4     0.002       1.4     220     320 ..      53     152 ..      41     205 .. 0.52

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.002
  Presenilin 220 vvvlaaeekkaevaeseeeeeaekkkeeasesskeeeseeesseksaqsse..seeeseeesseaessaeesseekeseessesseeeeeeeeeeeese 316
                    +a+  k ++++++e+e+ ++kk ee+ essk+e +e e ++ +++s+    ++es +++++a+ ++++++++ ++++s +s++e+  +ee+ ++++
  EPX70719.1  53 QQKAAR--KGTKARKAEKETPEKKKVEEEPESSKTEGDEGEDEKVEDSSKGsdVTAESAAAAAAAK-KKKKNKKKLKNKKSGDSTAEKIATEESVKSMS 148
                 333322..2223333333333333333333333333333333332333222112222222222222.22223333334444455555545555555555 PP

  Presenilin 317 seer 320
                 +eer
  EPX70719.1 149 KEER 152
                 5443 PP

>> BAF1_ABF1  BAF1 / ABF1 chromatin reorganising factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5  16.5    0.0053       3.8     102     199 ..      57     151 ..      40     175 .. 0.49

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0053
   BAF1_ABF1 102 kekteeseeatkasaeaeteslkkdeseenketqkkkeadaadedddvsaaiaaAVaavadsknakeekkeekakkeedaeentnknenndasisqkk 199
                  +k  ++++a+k++ e++  +++ ++s+++ +  ++++ +++++  dv+a+ aaA aa++++k++k++ k++k+  ++ ++  +++++ ++  +s+++
  EPX70719.1  57 ARKGTKARKAEKETPEKKKVEEEPESSKTEGDEGEDEKVEDSSKGSDVTAESAAAAAAAKKKKKNKKKLKNKKSGDSTAEK-IATEESVKS--MSKEE 151
                 22222222222222222222222222222222223333444577889********99999888887777666554443333.333333333..22222 PP

>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2  15.7    0.0075       5.4     115     230 ..      65     183 ..      42     189 .. 0.36

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.0075
       CDC45 115 eleeereayealeeeeesdeedeeeeeeddddeeeeeeeeedeedeeedeeeskkkrksksdeeeesddddersrkrrrsepsakklrrq.lkkerrky 212
                 + e+e  + +++eee+es++ +   +e +d++ e++++ ++ + ++ +    +kkk+k+k++ + ++++ d +++++  +e+s k++ ++ + k+  + 
  EPX70719.1  65 KAEKETPEKKKVEEEPESSKTE--GDEGEDEKVEDSSKGSDVTAESAAAAAAAKKKKKNKKKLK-NKKSGD-STAEKIATEESVKSMSKEeRSKLATEL 159
                 3334444445555555554222..2222222112222221112222222222222222111111.122222.222222222222222222122222222 PP

       CDC45 213 ea......vlekyysqgtsygesv 230
                 ++        ++y +   +y++++
  EPX70719.1 160 KTlgnkayGQKEYANAIDFYSQAI 183
                 221111113344555555555555 PP

>> SLC12  Solute carrier family 12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   9.4    0.0076       5.5     114     228 ..      38     153 ..      20     183 .. 0.31

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0076
       SLC12 114 avaiLrlkegldvsellqeeeeeeeekekkeaeesekeeeekkkakkkklle...ekskekeekekleekdsnlslseekkeeekekkkekkkkkekke 209
                 ava++ ++ g+   + ++++++ ++++++++++ ++k+ ee+ +++k++  e   ek + +++ +++++++  +    +kk+++k+k k+kk+ +++ e
  EPX70719.1  38 AVAVFATAGGIYHVKQQKAARKGTKARKAEKETPEKKKVEEEPESSKTEGDEgedEKVEDSSKGSDVTAESAAAAAAAKKKKKNKKKLKNKKSGDSTAE 136
                 566666666665553333332222222222211111111111111111111121111111111111111111111111111111111111111111222 PP

       SLC12 210 klkkkekslllkeaskee.k 228
                 k  ++e+ +   ++skee  
  EPX70719.1 137 KIATEESVK---SMSKEErS 153
                 222111111...11111121 PP

>> RR_TM4-6  Ryanodine Receptor TM 4-6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9  16.2     0.014        10      72     166 ..      50     143 ..      23     161 .. 0.56

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.014
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXX.............XXXXXXXXXXXXXXXXXXXXXXXXX-HHH CS
    RR_TM4-6  72 Dlseteaeesptpelkkklaeeeeaeeekeeeeepeaeaeekadaengekeekeke...keeeekeseeeeeekkkkkkakskkkeeaeaeesellkk 166
                  +++++a+++   ++ +k +  +e+ e+k+ eeepe++++e  + e+++ e+++k    ++e++ ++++ +++kk kkk k+kk+  ++ae+ ++ ++
  EPX70719.1  50 HVKQQKAARKG--TKARKAE--KETPEKKKVEEEPESSKTEGDEGEDEKVEDSSKGsdvTAESAAAAAAAKKKKKNKKKLKNKKSGDSTAEKIATEES 143
                 44444444442..2333332..3444445555555555544444444444443333445444445555555555555666666666666666555554 PP

>> DUF2052  Coiled-coil domain containing protein (DUF2052)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5  15.9     0.024        17      67     154 ..      54     160 ..      43     165 .. 0.50

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.024
     DUF2052  67 eaaaaerleaqqeeleeeeeeeeeeeeeeeeeeeeeeedekekaea...................deedeeeeeekeekeeeeekeeeaeaevlseeer 146
                 ++aa++ ++a+++e+e  e+++ eee+e+++ e +e edek ++++                   ++++++ +++k  +++ e++++e+  +++s+eer
  EPX70719.1  54 QKAARKGTKARKAEKETPEKKKVEEEPESSKTEGDEGEDEKVEDSSkgsdvtaesaaaaaaakkkKKNKKKLKNKKSGDSTAEKIATEESVKSMSKEER 152
                 444444444444443222222222222222222222233333322245567777777777654433333333333366667777777777778888888 PP

     DUF2052 147 eelreeFt 154
                  +l  e++
  EPX70719.1 153 SKLATELK 160
                 87777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (630 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2428  (0.135423); expected 358.6 (0.02)
Passed bias filter:                      835  (0.0465726); expected 358.6 (0.02)
Passed Vit filter:                       162  (0.00903564); expected 17.9 (0.001)
Passed Fwd filter:                        41  (0.0022868); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              25  [number of targets reported over threshold]
# CPU time: 0.95u 0.32s 00:00:01.27 Elapsed: 00:00:00.51
# Mc/sec: 3710.09
//
Query:       EPX70720.1  [L=99]
Description: protein phosphatase inhibitor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.4e-25   87.6   5.1    5.2e-25   87.1   5.1    1.3  1  PPI_Ypi1  Protein phosphatase inhibitor


Domain annotation for each model (and alignments):
>> PPI_Ypi1  Protein phosphatase inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.1   5.1   2.9e-29   5.2e-25       1      60 []      34      86 ..      34      90 .. 0.94

  Alignments for each domain:
  == domain 1  score: 87.1 bits;  conditional E-value: 2.9e-29
    PPI_Ypi1  1 vLrLrgeekkkkkkkskrrVrWeedvvDNEgmnkkksKiCCIyhkprefdesSsesssss 60
                vLrL++       ++++rrVrW++++vDNE+mnkkksK+CCI+hk ++fdesSses+s+s
  EPX70720.1 34 VLRLQP-------ESRGRRVRWANNTVDNENMNKKKSKVCCIFHKAKRFDESSSESDSDS 86
                567766.......999****************************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       979  (0.0546043); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.28s 00:00:00.69 Elapsed: 00:00:00.45
# Mc/sec: 667.36
//
Query:       EPX70721.1  [L=145]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0027   17.5   0.2     0.0038   17.0   0.2    1.2  1  DUF4588   Domain of unknown function (DUF4588)


Domain annotation for each model (and alignments):
>> DUF4588  Domain of unknown function (DUF4588)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.2   2.1e-07    0.0038      26      71 ..       4      47 ..       1      54 [. 0.81

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 2.1e-07
     DUF4588 26 qqkLwllFqnsAkAvAqLYkaaseaqqqklslwteFqnAAkavtsL 71
                q++L  +F+++A +v+qLY+      ++ +s +  +++A k +++L
  EPX70721.1  4 QENLLSHFKQTALSVTQLYQ--ASTAESLRSQKAGYAQALKEIAEL 47
                67899999999999999999..445556778888888888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1062.14
//
Query:       EPX70722.1  [L=314]
Description: RACK1 Cpc2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.1e-50  167.0  31.4      2e-10   41.1   0.4    7.1  7  WD40          WD domain, G-beta repeat
    3.7e-11   43.2   0.5      0.062   13.6   0.0    5.0  4  ANAPC4_WD40   Anaphase-promoting complex subunit 4 WD40 domai
    0.00016   20.7   0.5        2.7    6.9   0.0    3.5  3  Ge1_WD40      WD40 region of Ge1, enhancer of mRNA-decapping 
     0.0016   17.2   6.3      0.057   12.1   0.0    3.9  4  Nup160        Nucleoporin Nup120/160
     0.0029   17.5   0.3        1.4    9.0   0.1    3.9  5  PD40          WD40-like Beta Propeller Repeat
     0.0043   15.6   0.1        1.7    7.1   0.0    2.4  2  Cytochrom_D1  Cytochrome D1 heme domain
      0.008   16.1   0.3        1.7    8.5   0.1    2.9  3  eIF2A         Eukaryotic translation initiation factor eIF2A
  ------ inclusion threshold ------
      0.023   14.0   0.0        3.5    6.8   0.0    2.4  2  WD40_like     WD40-like domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.0   3.8e-08   8.6e-05       5      38 .]       9      44 ..       6      44 .. 0.81
   2 !   30.9   1.0   1.5e-10   3.3e-07       4      38 .]      56      91 ..      53      91 .. 0.92
   3 !   41.1   0.4     9e-14     2e-10       1      38 []      95     133 ..      95     133 .. 0.96
   4 !   28.3   1.7   9.7e-10   2.2e-06       1      38 []     136     178 ..     136     178 .. 0.85
   5 !   30.8   0.3   1.6e-10   3.5e-07       6      38 .]     188     220 ..     182     220 .. 0.87
   6 !   12.8   0.0   7.6e-05      0.17       5      38 .]     228     260 ..     224     260 .. 0.81
   7 !   18.2   0.2   1.5e-06    0.0033      13      37 ..     287     310 ..     275     311 .. 0.85

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 3.8e-08
                EEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40  5 rtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38
                 tl+GH ++vtsl++ p+++  l+sGs+D+++ +W+
  EPX70722.1  9 ATLEGHsGWVTSLSTAPENPDiLLSGSRDKSIILWN 44
                5899**666*****6666666267***********8 PP

  == domain 2  score: 30.9 bits;  conditional E-value: 1.5e-10
                EEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  4 lrtltGHss.vtslafspdgawlasGsdDgtvriWd 38
                +r ltGHs+ v+++a s d+++ +s+s+D+t+r+Wd
  EPX70722.1 56 QRRLTGHSHfVSDCALSFDSHYALSASWDKTIRLWD 91
                6889***667************99***********9 PP

  == domain 3  score: 41.1 bits;  conditional E-value: 9e-14
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 g+c++ + GH s+v s++ spd++ ++sGs+D+t++iW+
  EPX70722.1  95 GECTHQFVGHnSDVLSVSISPDNRQVVSGSRDKTIKIWN 133
                 68********888*************************8 PP

  == domain 4  score: 28.3 bits;  conditional E-value: 9.7e-10
                 TEEEEEEE..SS.SSEEEEEEETTSSEE..EEEETTSEEEEEE CS
        WD40   1 gqclrtlt..GH.ssvtslafspdgawl..asGsdDgtvriWd 38 
                 g+c +t+t  GH ++v++++fsp+ + l  +s+++D+ v++Wd
  EPX70722.1 136 GNCKYTITdgGHsDWVSCVRFSPNPDNLtfVSAGWDKAVKVWD 178
                 5788888777**666************743699*********9 PP

  == domain 5  score: 30.8 bits;  conditional E-value: 1.6e-10
                 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +  GH + v+++  spdg++ asG++Dgt+++Wd
  EPX70722.1 188 H-YGHtGYVSAVTISPDGSLCASGGRDGTLMLWD 220
                 3.499666*************************9 PP

  == domain 6  score: 12.8 bits;  conditional E-value: 7.6e-05
                 EEEESSSSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGHssvtslafspdgawlasGsdDgtvriWd 38 
                 ++l++  ++++l fsp+  wl++++   ++ri+d
  EPX70722.1 228 YSLEAKANINALVFSPNRYWLCAAT-GSSIRIFD 260
                 45554445*************9888.******98 PP

  == domain 7  score: 18.2 bits;  conditional E-value: 1.5e-06
                 EEEEEEETTSSEEEEE.ETTSEEEEE CS
        WD40  13 vtslafspdgawlasG.sdDgtvriW 37 
                 v sl +spdg+ l+sG + D+ +r+W
  EPX70722.1 287 V-SLTWSPDGQTLFSGwT-DNVIRVW 310
                 3.677*********9999.******* PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.1    0.0018       3.9      41      84 ..      66     108 ..      29     159 .. 0.83
   2 !   12.4   0.0   6.7e-05      0.15      28      89 ..     175     241 ..     122     244 .. 0.89
   3 !    6.6   0.0    0.0043       9.7      36      78 ..     231     272 ..     226     279 .. 0.87
   4 !   13.6   0.0   2.8e-05     0.062      34      67 ..     279     312 ..     273     314 .] 0.85

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0018
  ANAPC4_WD40  41 vrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekav 84 
                  v++ a + d +    a  d ++rl d e+g++ h++  ++++ v
   EPX70722.1  66 VSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHNSD-V 108
                  5555666677777788889999**********9999776664.4 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 6.7e-05
  ANAPC4_WD40  28 rvwtl.......eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                  +vw+l       ++ ++ + v+++  +pdg+l a +  dg++ l d ++ + + sl++k++  ++ l +
   EPX70722.1 175 KVWDLesfslrtSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKAN--INALVF 241
                  56666777777677788999*******************************9999999987..776655 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.0043
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsv 78 
                  + + ++++L ++p+   L+ a+  +++r++d e+++ v +l+v
   EPX70722.1 231 EAKANINALVFSPNRYWLCAATG-SSIRIFDLETQEKVDELTV 272
                  567899************99986.58**********9998876 PP

  == domain 4  score: 13.6 bits;  conditional E-value: 2.8e-05
  ANAPC4_WD40  34 edkedsevrsLaWkpdgklLavaysdgevrllda 67 
                  +++++ e  sL W+pdg+ L  ++ d+ +r+ ++
   EPX70722.1 279 KKSSEPECVSLTWSPDGQTLFSGWTDNVIRVWQV 312
                  5666778889********************9887 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.3   0.3    0.0037       8.4     184     249 ..      59     120 ..      38     145 .. 0.71
   2 !    4.9   0.0    0.0047        10     187     217 ..     191     222 ..     162     230 .. 0.79
   3 !    6.9   0.0    0.0012       2.7     184     216 ..     280     312 ..     245     314 .] 0.78

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0037
    Ge1_WD40 184 ieehs.liveaafspdGtalatasedGevkffqvyledeeeprCLheWkPhdGkslssllfldnhke 249
                 ++ hs  +++ a+s d      as d +++++ +     e+  C h++  h+   ls  +  dn + 
  EPX70722.1  59 LTGHShFVSDCALSFDSHYALSASWDKTIRLWDL-----EKGECTHQFVGHNSDVLSVSISPDNRQV 120
                 5566656888888888888888888888888854.....6778888888888888887777777654 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.0047
    Ge1_WD40 187 hs.liveaafspdGtalatasedGevkffqvy 217
                 h+  ++  ++spdG   a    dG++ ++ ++
  EPX70722.1 191 HTgYVSAVTISPDGSLCASGGRDGTLMLWDLN 222
                 343789999****************9999876 PP

  == domain 3  score: 6.9 bits;  conditional E-value: 0.0012
    Ge1_WD40 184 ieehsliveaafspdGtalatasedGevkffqv 216
                  +++++ v+ ++spdG +l    +d +++ +qv
  EPX70722.1 280 KSSEPECVSLTWSPDGQTLFSGWTDNVIRVWQV 312
                 34445789999*********************9 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   0.0   2.5e-05     0.057     220     255 ..      64     100 ..      42     104 .. 0.88
   2 ?    3.5   0.0      0.01        23     224     250 ..     112     137 ..     102     145 .. 0.75
   3 ?   -1.1   0.1      0.24   5.5e+02     235     249 ..     167     181 ..     148     189 .. 0.75
   4 ?    2.5   0.1      0.02        45     238     302 ..     212     297 ..     194     306 .. 0.59

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.5e-05
                 EEET......TTTEEEEEETT-EEEEEETTTTEEEEE CS
      Nup160 220 dvavavvei.gqtylfalsrdgkLrvWnlltgkclat 255
                 +++++++ + ++ y++++s d+++r+W+l+ g c+ +
  EPX70722.1  64 HFVSDCALSfDSHYALSASWDKTIRLWDLEKGECTHQ 100
                 67778887789**********************9875 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.01
                 .....TTTEEEEEETT-EEEEEETTTT CS
      Nup160 224 avveigqtylfalsrdgkLrvWnlltg 250
                 +++  ++  +++ srd+++++Wn+  +
  EPX70722.1 112 SISP-DNRQVVSGSRDKTIKIWNIIGN 137
                 3333.88899999**********8665 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 0.24
                 EEETT-EEEEEETTT CS
      Nup160 235 alsrdgkLrvWnllt 249
                 ++  d+ ++vW+l++
  EPX70722.1 167 SAGWDKAVKVWDLES 181
                 5556999*****986 PP

  == domain 4  score: 2.5 bits;  conditional E-value: 0.02
                 TT-EEEEEETTTTEEEEEEE--..-SSSTTS--SSEESEEESSSSEEEE...............................E--GGG- CS
      Nup160 238 rdgkLrvWnlltgkclatidll.rdeeaqdessskstldpaesslirvs.....................dggqsylvvtyspssgg 302
                 rdg+L +W+l+  ++l++ + + +   a ++s  +  l  a+ s ir++                     +++ ++ ++t sp+++ 
  EPX70722.1 212 RDGTLMLWDLNESTHLYSLEAKaN-INALVFSPNRYWLCAATGSSIRIFdletqekvdeltvdfvgvgkkSSEPECVSLTWSPDGQT 297
                 899999999999999999776631.22233333333444555555555555555555555555555555555555555555555555 PP

>> PD40  WD40-like Beta Propeller Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       1.5   3.4e+03      15      21 ..     112     118 ..     110     121 .. 0.79
   2 ?   -1.5   0.0       1.2   2.6e+03      14      27 ..     154     167 ..     152     168 .. 0.81
   3 ?    3.1   0.0     0.043        96       9      21 ..     193     205 ..     191     207 .. 0.78
   4 ?   -2.0   0.0       1.7   3.8e+03      15      23 ..     240     248 ..     234     249 .. 0.69
   5 !    9.0   0.1    0.0006       1.4      15      23 ..     290     298 ..     288     299 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 1.5
                 EE-TTSS CS
        PD40  15 sfSPDGk 21 
                 s+SPD +
  EPX70722.1 112 SISPDNR 118
                 89***87 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 1.2
                 EEE-TTSSEEEEEE CS
        PD40  14 PsfSPDGkrlaFsS 27 
                  +fSP+   l+F+S
  EPX70722.1 154 VRFSPNPDNLTFVS 167
                 58999988888887 PP

  == domain 3  score: 3.1 bits;  conditional E-value: 0.043
                 S.EEEEEE-TTSS CS
        PD40   9 gnegaPsfSPDGk 21 
                 g+  a ++SPDG+
  EPX70722.1 193 GYVSAVTISPDGS 205
                 6667889*****6 PP

  == domain 4  score: -2.0 bits;  conditional E-value: 1.7
                 EE-TTSSEE CS
        PD40  15 sfSPDGkrl 23 
                  fSP+  +l
  EPX70722.1 240 VFSPNRYWL 248
                 588877666 PP

  == domain 5  score: 9.0 bits;  conditional E-value: 0.0006
                 EE-TTSSEE CS
        PD40  15 sfSPDGkrl 23 
                 ++SPDG++l
  EPX70722.1 290 TWSPDGQTL 298
                 8******98 PP

>> Cytochrom_D1  Cytochrome D1 heme domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.0   0.1    0.0016       3.7      43      95 ..      71     124 ..      46     128 .. 0.85
   2 !    7.1   0.0   0.00077       1.7      34     116 ..     191     271 ..     158     296 .. 0.62

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0016
                   -TT.SSEEEEEETTSEEEEEESSSSS.EEEEEE-SSEEEEEEE--TTSEEEEEE CS
  Cytochrom_D1  43 fasdgRyvyvigRDgkvtliDLwake.ivaevkiGlnarsvavSqddryvivgn 95 
                    + d  y++ ++ D ++ l DL + e + + v   ++  sv +S d+r v+ g+
    EPX70722.1  71 LSFDSHYALSASWDKTIRLWDLEKGEcTHQFVGHNSDVLSVSISPDNRQVVSGS 124
                   577899******************99777888889999999999******9986 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.00077
                   STTEEEEEE-TT.SSEEEEEETTSEEEEEESSSSSEEEEEE-SSEEEEEEE--TTSEEEEEEEETTEEEEEETTT--EEEEEE CS
  Cytochrom_D1  34 gyalHisrvfasdgRyvyvigRDgkvtliDLwakeivaevkiGlnarsvavSqddryvivgnYlPgqlvildaetLelvkvis 116
                   +     ++  ++dg +    gRDg++ l DL + + +  +++  n   +  S +  ++ +++     + i+d et e v ++ 
    EPX70722.1 191 HTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKANINALVFSPNRYWLCAAT--GSSIRIFDLETQEKVDELT 271
                   44444555667888888888888888888888888777777777777776666555555443..4567777777777776654 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0     0.089     2e+02      76      99 ..     120     143 ..      81     205 .. 0.59
   2 !    6.7   0.0    0.0027         6      62     163 ..     151     253 ..     141     267 .. 0.78
   3 !    8.5   0.1   0.00074       1.7      86     177 ..     217     311 ..     210     313 .. 0.58

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.089
                 EEESSSSCEEEEEECSCEEEEEEE CS
       eIF2A  76 viyGkmpakvslfdlkvkviskle 99 
                 v+ G  ++++++++  ++ ++++ 
  EPX70722.1 120 VVSGSRDKTIKIWNIIGNCKYTIT 143
                 555555666665555444444433 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0027
                 EEEEEE-TTSS-EEEEESSSSCEEEEEECS...CEEEEEEEEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-.TT--EEEE-TTSS CS
       eIF2A  62 ihdvaWspkskefaviyGkmpakvslfdlk...vkviskleeqkrNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakaea.anatlvewspdgr 156
                 + +v  sp+ ++++ +    ++ v+++dl+   ++  +  ++ +  ++  sp g l + +G     G+l +wd ++ +++ ++ea an   + +sp+  
  EPX70722.1 151 VSCVRFSPNPDNLTFVSAGWDKAVKVWDLEsfsLRTSHYGHTGYVSAVTISPDGSLCASGGR---DGTLMLWDLNESTHLYSLEAkANINALVFSPNRY 246
                 67888899999999999999999999999666577777778889999999999999888774...6889****99887777777614566777888766 PP

                 EEEEEE- CS
       eIF2A 157 yvlTatt 163
                 ++  at 
  EPX70722.1 247 WLCAATG 253
                 6666654 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.00074
                 EEEECS.CEEEEEEE.EES--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEE...........EEEE-TT--EEEE-TTSSEEEEEE-TTT-SSS- CS
       eIF2A  86 slfdlk.vkviskle.eqkrNtiffspkgklvllaGfgnlaGeleiwdvkkkkki...........akaeaanatlvewspdgryvlTattaprlrvdn 171
                  l+dl+    +++le +++ N+++fsp+   ++ a   +    + i+d ++ +k+           +k  +++++++ wspdg+ +    t      dn
  EPX70722.1 217 MLWDLNeSTHLYSLEaKANINALVFSPNRYWLCAATGSS----IRIFDLETQEKVdeltvdfvgvgKKSSEPECVSLTWSPDGQTLFSGWT------DN 305
                 566665455566665145679999999866666654333....455555544444111111222225678899**********98765544......56 PP

                 EEEEEE CS
       eIF2A 172 gfkiws 177
                  +++w+
  EPX70722.1 306 VIRVWQ 311
                 666665 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0    0.0077        17       2      45 ..     107     151 ..     106     180 .. 0.83
   2 ?    6.8   0.0    0.0016       3.5       5      78 ..     197     269 ..     194     274 .. 0.79

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.0077
   WD40_like   2 eiYsidiskkgslilyGgkddkctvlkleslesvsives.fedSv 45 
                 ++ s+ is+++  ++ G++d+++++ ++  +++ +i ++  +d v
  EPX70722.1 107 DVLSVSISPDNRQVVSGSRDKTIKIWNIIGNCKYTITDGgHSDWV 151
                 6889*************************9999999875245555 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0016
   WD40_like   5 sidiskkgslilyGgkddkctvlkleslesvsivesfedSvifvklldddlilvvtlDGtillslleneeeven 78 
                 ++ is++gsl + Gg+d ++ + +l+  +  +++e  +  +    +  +   l+++    i   +le +e+v++
  EPX70722.1 197 AVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEA-KANINALVFSPNRYWLCAATGSSIRIFDLETQEKVDE 269
                 789*************************99999986.4456556666677778877777887788888777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       362  (0.0201908); expected 358.6 (0.02)
Passed bias filter:                      326  (0.0181828); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.52u 0.32s 00:00:00.84 Elapsed: 00:00:00.46
# Mc/sec: 2065.38
//
Query:       EPX70723.1  [L=70]
Description: hypothetical protein SOCG_05905 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       622  (0.0346924); expected 358.6 (0.02)
Passed bias filter:                      307  (0.0171231); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.25s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 523.22
//
Query:       EPX70724.1  [L=345]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.7e-26   90.4   1.0    2.6e-25   89.0   1.0    1.7  1  DUF4451   Domain of unknown function (DUF4451)


Domain annotation for each model (and alignments):
>> DUF4451  Domain of unknown function (DUF4451)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.0   1.0   1.4e-29   2.6e-25       4     101 ..     240     339 ..     238     345 .] 0.93

  Alignments for each domain:
  == domain 1  score: 89.0 bits;  conditional E-value: 1.4e-29
     DUF4451   4 ndlYeprvvrgekdknekkeglCpiCeeevekkekflklknssyekhlsfeHGvlsngslvpePillrskkrrkakek....ekegiv...CpkCneii 95 
                 +d+Y pr++rg   +++kkeglCpiC+  ++k+ ++l++k+s+y++h++f HG++s+g+++++Pi +r+   rk k+     ++++iv   C++Cn++i
  EPX70724.1 240 DDYYLPRFTRG---QGKKKEGLCPICC--FQKNFVWLRTKTSAYWYHMNFLHGIHSKGRPYHPPIEFRTIPVRKVKSIiglpDRRQIVqgkCHQCNRWI 333
                 589********...99***********..588*********************************************99**98899999********** PP

     DUF4451  96 evslsk 101
                 ++++  
  EPX70724.1 334 RCQANP 339
                 *99765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (345 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       447  (0.0249317); expected 358.6 (0.02)
Passed bias filter:                      269  (0.0150036); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 2710.89
//
Query:       EPX70725.1  [L=243]
Description: translation initiation factor eIF2 beta subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.9e-41  139.3   0.1    9.1e-41  138.4   0.1    1.4  1  eIF-5_eIF-2B     Domain found in IF2B/IF5
    6.8e-05   22.3   0.2    0.00013   21.4   0.2    1.5  1  TF_Zn_Ribbon     TFIIB zinc-binding
     0.0048   16.7   0.0      0.011   15.5   0.0    1.6  1  IF2_N            Translation initiation factor IF-2, N-termin


Domain annotation for each model (and alignments):
>> eIF-5_eIF-2B  Domain found in IF2B/IF5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.4   0.1   1.5e-44   9.1e-41       7     116 ..     113     221 ..     108     222 .. 0.97

  Alignments for each domain:
  == domain 1  score: 138.4 bits;  conditional E-value: 1.5e-44
                   SSS--SSTT--EEEETT.EEEETTHHHHHHHHTTSHHHHHHHHHHHHTSEEEESETTEEEESSSSSCCHHHHHHHHHHHHHTSTSSSTSTCEEECCS CS
  eIF-5_eIF-2B   7 kkerykmpklqvkvegkkktvivNfeeiakaLnrdpehvlkyllkelgtqgsidengrlilngkfeakkleklldkyieeyVlCkeCkspeteleke 103
                   +k++y++ +++v++egk kt+++N+++iak+++r+ +hv+++l++elgt+gs+d+++rli++g+f++k++e++l++yi eyV+Ck+Cksp+t l+ke
    EPX70725.1 113 EKRKYTIVPPSVHREGK-KTIFANINDIAKRMHRSLDHVIQFLFAELGTSGSVDGSSRLIIKGRFQQKQMENVLRRYIVEYVTCKTCKSPDTILTKE 208
                   5789*************.******************************************************************************* PP

                   SSCEEEEESSSTC CS
  eIF-5_eIF-2B 104 erllvlkCkaCga 116
                   +r+++++C+aCg+
    EPX70725.1 209 NRIFFMTCEACGS 221
                   ***********97 PP

>> TF_Zn_Ribbon  TFIIB zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.2   2.2e-08   0.00013       2      37 ..     194     231 ..     193     235 .. 0.89

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 2.2e-08
                   EETTTTCEE.CHEETSTTCE.EESSSSBEEEECCCCCC CS
  TF_Zn_Ribbon   2 kCPnCgstn.lveDpergel.vCtdCGlVlednsideg 37 
                   +C+ C+s++ +++ ++r  + +C++CG+V   + i+ g
    EPX70725.1 194 TCKTCKSPDtILTKENRIFFmTCEACGSVRSVQAIKTG 231
                   7******9989999***************999888876 PP

>> IF2_N  Translation initiation factor IF-2, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   1.9e-06     0.011       6      31 ..     136     161 ..     132     167 .. 0.91

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.9e-06
       IF2_N   6 VyeLAkeLgvkskevikkLfkelGie 31 
                 ++++Ak+++ +   vi++Lf+elG +
  EPX70725.1 136 INDIAKRMHRSLDHVIQFLFAELGTS 161
                 89**********************76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (243 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1230  (0.0686039); expected 358.6 (0.02)
Passed bias filter:                      645  (0.0359752); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 1848.73
//
Query:       EPX70726.1  [L=700]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-42  145.4   8.9    2.8e-42  145.4   8.9    2.4  2  DUF1708   Domain of unknown function (DUF1708)
  ------ inclusion threshold ------
        6.3    7.6   8.7    1.5e+02    3.1   8.8    2.9  1  FliD_N    Flagellar hook-associated protein 2 N-terminus


Domain annotation for each model (and alignments):
>> DUF1708  Domain of unknown function (DUF1708)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.4   8.9   3.1e-46   2.8e-42      43     415 ..      66     423 ..      30     436 .. 0.82
   2 ?   -1.4   0.8      0.11     1e+03     287     357 ..     468     563 ..     433     598 .. 0.48

  Alignments for each domain:
  == domain 1  score: 145.4 bits;  conditional E-value: 3.1e-46
     DUF1708  43 tflrnfFpkgqeegsslkgeellqelrktdiltLisvlkylWsrlpggvvgwdaYeeFkkkEkeselprdaFltfipkslssearasivydFldLlvai 141
                 +f+r+f+++  e++++++ +e+++++r+ ++++Lis+l+++  r+pggv++w +Y+ F+ +E ++++p++ F+ f+++  +++++ +++  Fl L++++
  EPX70726.1  66 AFVREFYKN-LEKKQKIEPDEIRNQVRLLSETSLISCLRWILHRIPGGVITWATYKLFQEAELRANYPTSGFNIFMKHATKNSHHLNVLNHFLKLMMSL 163
                 79******7.455899*********************************************************************************** PP

     DUF1708 142 aahgkknglggrklsrl......aglwAFehkdkgnsfeeglkswskaadAlshLflayLrsllpekeketegsklprsLqkllqeteYPPekstllqs 234
                 +a    n  ++rk s l      a++wAFe    + s+++ l+ w+k ++A++hL+l y+rs+ +++++    s lp +Lq+ +q  +YPP++ + l++
  EPX70726.1 164 SA-KMANSTQVRKGSSLesvaqiASIWAFE--WPQMSLQDTLEYWNKCSNACFHLLLCYIRSMDKHDQSGF--SCLPYTLQTQVQRCKYPPQTINYLDE 257
                 99.67888899987776666666*******..7789****************************9966664..99*****************9888888 PP

     DUF1708 235 stlltvplvvl.ivdkvsptpfaLLrrakktlkfdnkdaFeareddalLkelfkeledivkalseeskrvlkaissanqsqssstsledaswsrfkdig 332
                 +      lv    ++ +s++p+++++ + +         +    +  +  +l + +ed++++    +  +l+++s+++ s +s  s+++  ws+f   g
  EPX70726.1 258 KA----SLVNFsLSSYFSKDPLEVIQLVFQ---------MPVPKN--ISSSLPRRFEDVQTK----CLSTLQQVSKRT-SYHSVFSIQESAWSSFITNG 336
                 77....44444146779*********9988.........333333..445666677777765....777888888333.33567889999********* PP

     DUF1708 333 feaglee.eerpttpsWadfls..sglkssqsdkkele.lkeelepgelasvsrvdiddyFiwvWlsslsseetsekkalfGrslvi 415
                 f++ + + +++ t+ s  +     s +++    ++  + +k+  ++ +  s++ v  +   +w W+ s  +e +++k+++f  + ++
  EPX70726.1 337 FNHPIAPtKTQETVCSILSGEIstSDFPHVAPLDQVSSlDKNIANECSFESITPVCSSRNLWWLWVESRCPEIPESKRTVFMNCTMM 423
                 **9996667777777776544412444444433333330334455678899******************************999875 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.11
     DUF1708 287 k..eledivkalseeskrvlkaissanqsqss.........stsledaswsrfkdigfeagleeee........rpttpsWadflssgl........k 357
                 k  ++++ +++l+++ +r  +++  + + +           + s +da +++ k +++ + +ee e          t   Wa++ +s          +
  EPX70726.1 468 KpkKFQKKTSMLTNSPRRSCQSVLYESNRA-IllhladqmnQLSSTDAYKKDVKPLNLISEHEE-EwdpeatgyVNTLLDWANKRQSMYdepiklryP 563
                 333444555555555555554444222211.122233223244445555555555555555322.134566666666777887766444444443331 PP

>> FliD_N  Flagellar hook-associated protein 2 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   8.8     0.017   1.5e+02      10      60 ..     428     478 ..     422     617 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.017
                 XXXXXXXXX.XXXXXXXXXXXXXXXHHHHHHHHHHHHHHHHHHHHHXXGGGG CS
      FliD_N  10 kqlmkaera.kldkleqkktklewkqsayrelnsklsnlksalsalsksstf 60 
                 ++l+  e++ +  kl +++ ++++k ++++ ++s+++ +++   +++k++++
  EPX70726.1 428 NKLLIFEQSvPTSKLLTQQDEYQAKTTILNRIRSSFKRVIKPK-KFQKKTSM 478
                 4555566666***************************999922.33333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (700 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       678  (0.0378158); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.74u 0.33s 00:00:01.07 Elapsed: 00:00:00.55
# Mc/sec: 3855.70
//
Query:       EPX70727.1  [L=844]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.2e-33  115.2   0.2    3.2e-33  115.2   0.2    2.8  3  DUF4449       Protein of unknown function (DUF4449)
     0.0045   16.0   1.1     0.0067   15.4   1.1    1.1  1  DUF5585       Family of unknown function (DUF5585)
  ------ inclusion threshold ------
      0.021   14.7   0.6      0.021   14.7   0.6    2.7  3  Mer2          Mer2
       0.12   12.4   0.9       0.53   10.3   0.0    2.5  2  DUF725        Protein of unknown function (DUF725)
       0.23   11.5   1.8         13    5.9   0.1    3.6  4  VPR           VPR/VPX protein
        1.1    8.8  16.5       0.92    9.0   7.1    2.7  2  Exonuc_VII_L  Exonuclease VII, large subunit


Domain annotation for each model (and alignments):
>> DUF4449  Protein of unknown function (DUF4449)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       2.2   6.5e+03      57      96 ..      55      88 ..      42     118 .. 0.54
   2 ?   -1.5   1.2      0.83   2.5e+03      44     103 ..     164     222 ..     159     262 .. 0.60
   3 !  115.2   0.2   1.1e-36   3.2e-33       1     158 [.     576     730 ..     576     733 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 2.2
     DUF4449 57 kqeaerakeeaksdpenapniysryldalkkkftkkkeka 96
                 q+++r++ ++++       ++s++ + + ++++  k+k+
  EPX70727.1 55 AQDVKRNMSKDAR------DFFSHFSEVIDDSYSVLKKKN 88
                4444444444444......444444444444444444443 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.83
     DUF4449  44 daleklDaelyevkqeaerakeeaksdpenapniysryldalkkkftkkkekaeek.ekak 103
                 ++++++D +  ++ q+  +  ++  +++++ + +   yl+ + ++ +++++++ee  +  +
  EPX70727.1 164 QKFNQWDPQQGKLGQKSPSRHQNGPNESSRHQGYDGDYLSVFPAREQRENQSNEESsK--T 222
                 5677777777777777776666666666666666666777776666666666665311..1 PP

  == domain 3  score: 115.2 bits;  conditional E-value: 1.1e-36
     DUF4449   1 vdvdnLkiklkkSkHklLfklfKPlllkvirpaiqkalekqirdaleklDaelyevkqeaerakeeaksdpena.pniysryldalkkkftkkkekaee 98 
                 vdv+n+k+k++kS+Hk L++++KP ++++ir++++++le +ir ++e+lD+++ye++ ea+++ + +++ p+++  +  + y + + ++f++ ++++++
  EPX70727.1 576 VDVHNIKLKVRKSRHKALLNFLKPSMMTYIRTTVARSLEVSIRRTVEQLDRQCYEIHREAQNELDRQSKRPTEEqDSRTKVYGKTIYNRFSSMQQRSQS 674
                 89*************************************************************9999996655526778889999******99999999 PP

     DUF4449  99 kekakkadkkvniavtkedsifpdiklpggistkateykelaakGekWeSpvFsigsase 158
                     + +++k+++a+++++s +++i lp+ + +  ++ ++ a++G +W+Spv++ + a  
  EPX70727.1 675 ----SGSNQKIRVALHEQNSELSNIVLPSHNLEEGERLRRSAHSGTAWRSPVYDSLGAMG 730
                 ....478**********************************************9877765 PP

>> DUF5585  Family of unknown function (DUF5585)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   1.1   2.2e-06    0.0067     209     295 ..     724     812 ..     709     816 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 2.2e-06
     DUF5585 209 aalatlataaqtvataantsdPmsr.tlsPsksmpsdtsasPipatraqaqGltsq.vsvdq.PvvnttdrptPpsnttlepnttksvas 295
                  +l+++   a++v + an s+P  + + s +k+    t+ +     ++ a G   q +  dq  + n t+ p Pp+nt     t +s+ s
  EPX70727.1 724 DSLGAMG-SAGAVGSLANRSRPSKKsKRSSAKNRQPATARTMNEGQQPNANGSLNQtILSDQmALGNVTEIPLPPANTQRRSLTEHSIGS 812
                 5566664.5899**********865256777777777777888999*******999445688346799******************9976 PP

>> Mer2  Mer2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.1       2.6   7.7e+03      68     120 ..      74      88 ..      46     124 .. 0.49
   2 ?   14.7   0.6   6.9e-06     0.021      53     115 ..     235     302 ..     230     360 .. 0.81
   3 ?    0.1   1.3       0.2   5.9e+02      86     169 ..     616     690 ..     587     703 .. 0.50

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 2.6
        Mer2  68 nellidlkeeesdnskekeikdlikdLsvkienqlskvskavldklkvkkhks 120
                  e +                                       d   v k+k+
  EPX70727.1  74 SEVI--------------------------------------DDSYSVLKKKN 88 
                 2222......................................22222222222 PP

  == domain 2  score: 14.7 bits;  conditional E-value: 6.9e-06
        Mer2  53 lkenskeLlkvisklnellidlkeeesdnskekeikdlikdLsvkienqlskvskavldklk.....v 115
                  ke+s+eL k++++l+ l++dl++++  +   ++i+ l+++   ++ +++ k++ + +d+++      
  EPX70727.1 235 RKETSEELRKIMDQLKRLVVDLQQDNAYQHPLQSIFGLVEKFVNELGDKKGKLQVETNDHIDralryL 302
                 5899****************************************************999998555553 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.2
        Mer2  86 eikdlikdLsvkienqlskvskavldklkvkkhksntdtksnLtellekkeakileeidkkqtkleksvdttqelllnvnkQle 169
                 +i   +++L+     q  +++++ +++l+ ++++   +++s  t++ +k+  + ++ ++++++    s+   q++ + + +Q +
  EPX70727.1 616 SIRRTVEQLDR----QCYEIHREAQNELDRQSKRPTEEQDS-RTKVYGKTIYNRFSSMQQRSQS-SGSN---QKIRVALHEQNS 690
                 44444444444....55555555555555333333332222.3444444444444444444332.2233...333333333333 PP

>> DUF725  Protein of unknown function (DUF725)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00018      0.53      38     106 ..     302     372 ..     292     380 .. 0.80
   2 ?   -1.7   0.5      0.94   2.8e+03      25      55 ..     626     656 ..     616     674 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00018
      DUF725  38 idekyeeerqqlessakeicsalqkCdsledald..afeCyakagsenskilysisanAtelaaklseeys 106
                 + e +e+++++  +   ++ +++++C +++  l+  + +Cya + +  +k  y+i+++At+ +++l e+ +
  EPX70727.1 302 LRELAENAVNHSLQPLINVFKKFHHCAQEDRELKqwFQDCYAYMRKFVLKKGYAITQDATDEYNELYERGR 372
                 556667777777778889999*****9877777633689*************************9988765 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.94
      DUF725  25 tkCistaeeekaeidekyeeerqqlessake 55 
                  +C +   e+++e+d +++ ++++ +s++k 
  EPX70727.1 626 RQCYEIHREAQNELDRQSKRPTEEQDSRTKV 656
                 5799999999999999999988888877765 PP

>> VPR  VPR/VPX protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0     0.071   2.1e+02      20      64 ..     247     291 ..     229     299 .. 0.78
   2 ?    5.9   0.1    0.0044        13      24      70 ..     300     346 ..     296     354 .. 0.86
   3 ?   -1.8   0.0       1.1   3.2e+03      46      76 ..     410     440 ..     379     444 .. 0.76
   4 ?   -1.6   0.0      0.94   2.8e+03      22      39 ..     624     641 ..     606     645 .. 0.73

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.071
         VPR  20 eWleetleeikeeAvkHfprelliavwnyiyeetgdeqeasiset 64 
                 + l++++ +++++    +p + ++ + +  ++e gd++++ + et
  EPX70727.1 247 DQLKRLVVDLQQDNAYQHPLQSIFGLVEKFVNELGDKKGKLQVET 291
                 458999999999998899******************999866665 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0044
         VPR  24 etleeikeeAvkHfprelliavwnyiyeetgdeqeasisetaykylr 70 
                 + l+e+ e+Av+H  + l++   ++    ++d++ + + + +y y+r
  EPX70727.1 300 RYLRELAENAVNHSLQPLINVFKKFHHCAQEDRELKQWFQDCYAYMR 346
                 679***************99999888888888888889999999986 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 1.1
         VPR  46 wnyiyeetgdeqeasisetaykylrllqkal 76 
                 +++ y+   +++++ +s +++ ++ +lq +l
  EPX70727.1 410 GKRLYNILVEHKGGETSLKKNTIYEILQLSL 440
                 5677777778888889999999999999776 PP

  == domain 4  score: -1.6 bits;  conditional E-value: 0.94
         VPR  22 leetleeikeeAvkHfpr 39 
                 l++   ei +eA++ ++r
  EPX70727.1 624 LDRQCYEIHREAQNELDR 641
                 556666788888777776 PP

>> Exonuc_VII_L  Exonuclease VII, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   7.1   0.00031      0.92     150     275 ..     232     360 ..      43     367 .. 0.68
   2 ?    4.5   1.9    0.0075        22     145     251 ..     613     694 ..     546     766 .. 0.51

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00031
  Exonuc_VII_L 150 eelerrlekaikrlleekkqrleklasrl..kspee....llerkrqrldeleerleralkkqlkkkrerleelkerlkekleekkerlkklkerle 240
                   +++++++++++++ +++ k+ +  l+++   ++p +    l+e+  ++l + + +l+ +++ +++++ + l+el+e+    +++  + l ++ ++++
    EPX70727.1 232 QQVRKETSEELRKIMDQLKRLVVDLQQDNayQHPLQsifgLVEKFVNELGDKKGKLQVETNDHIDRALRYLRELAEN---AVNHSLQPLINVFKKFH 325
                   11111111111111111111111111111111111111113333333333333333333333333333333333322...22222233333334444 PP

  Exonuc_VII_L 241 lleekkerleeleeklealsplkvLkrGyaivrke 275
                   + ++++++l++  +   a+  + vLk+Gyai++++
    EPX70727.1 326 HCAQEDRELKQWFQDCYAYMRKFVLKKGYAITQDA 360
                   899*****************************984 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.0075
  Exonuc_VII_L 145 leeqleelerrlekaikrlleekkqrleklasrlkspeellerkrqrldeleerleralkkqlkkkrerleelkerlkekleekkerlkklkerle. 240
                   le +++++ ++l+++  +  +                            e++++l+r+ k+ ++++ +r++ + +++ ++++++++r ++  ++ + 
    EPX70727.1 613 LEVSIRRTVEQLDRQCYEIHR----------------------------EAQNELDRQSKRPTEEQDSRTKVYGKTIYNRFSSMQQRSQSSGSNQKi 681
                   111111111111111111111............................222222222222233333333333322212333333333222111112 PP

  Exonuc_VII_L 241 ..lleekkerlee 251
                      l+e++++l++
    EPX70727.1 682 rvALHEQNSELSN 694
                   2223333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (844 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1745  (0.0973284); expected 358.6 (0.02)
Passed bias filter:                      749  (0.0417759); expected 358.6 (0.02)
Passed Vit filter:                        80  (0.00446204); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.98u 0.38s 00:00:01.36 Elapsed: 00:00:00.58
# Mc/sec: 4379.16
//
Query:       EPX70728.1  [L=780]
Description: homeobox transcription factor Phx1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.7e-17   60.6   0.6    2.3e-16   59.4   0.6    1.7  1  Homeodomain  Homeodomain
  ------ inclusion threshold ------
      0.045   13.7   0.2        0.1   12.5   0.2    1.6  1  Homeobox_KN  Homeobox KN domain


Domain annotation for each model (and alignments):
>> Homeodomain  Homeodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.4   0.6   2.6e-20   2.3e-16       3      56 ..     164     217 ..     162     218 .. 0.95

  Alignments for each domain:
  == domain 1  score: 59.4 bits;  conditional E-value: 2.6e-20
                  -SSSS-HHHHHHHHHHHHHSSS-SHHHHHHHHHHHTS-HHHHHHHHHHHHHHHH CS
  Homeodomain   3 kRttftkeqleeLeklFeenrypsaeereeLAkklgLeerqVkvWFqNrRakek 56 
                  k++++ +eql+ L + F+++ +ps + ree+A++l+L+er V++WFqNrRak k
   EPX70728.1 164 KKQRLVPEQLNYLLRQFAKDANPSPSVREEIARELNLPERSVTIWFQNRRAKAK 217
                  6788899*********************************************98 PP

>> Homeobox_KN  Homeobox KN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.2   1.1e-05       0.1      11      39 ..     186     214 ..     177     215 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.1e-05
  Homeobox_KN  11 PseedKeeLlkeTglsvkqitnWFINaRr 39 
                  Ps   +ee+++e +l  + +t WF N R+
   EPX70728.1 186 PSPSVREEIARELNLPERSVTIWFQNRRA 214
                  99999*********************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (780 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       867  (0.0483574); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.82u 0.38s 00:00:01.20 Elapsed: 00:00:00.58
# Mc/sec: 4062.45
//
Query:       EPX70729.1  [L=697]
Description: tryptophan synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-83  279.9   0.1      2e-83  279.2   0.1    1.3  1  Trp_syntA  Tryptophan synthase alpha chain
    6.6e-50  170.2   0.1    9.6e-50  169.6   0.1    1.3  1  PALP       Pyridoxal-phosphate dependent enzyme


Domain annotation for each model (and alignments):
>> Trp_syntA  Tryptophan synthase alpha chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  279.2   0.1   2.2e-87     2e-83       1     251 [.       9     260 ..       9     269 .. 0.94

  Alignments for each domain:
  == domain 1  score: 279.2 bits;  conditional E-value: 2.2e-87
                 HHHHHCTTB-EEEEEEETTSS-HHHHHHHHHHHHHCT-SSEEEE---S--TTS-HHHHHHHHCCCCTT--HHHHHHHHHHHHHHCSSS-EEEEE-CHHH CS
   Trp_syntA   1 faklkaenraafvpyvtagdpdleqsleilkalekagadviElGlpfsdPladGPvIqaanlraLakgvtlekvlelveevrkkevevPivlltylnlv 99 
                 f ++++enr+++v+++t g+p+++++++i+k+l+++ga viElG+pfsd +adGP+I + n++aL+++v+l+ v+++v+++r+++v++Pi+l++y+n++
  EPX70729.1   9 FLQARKENRNVLVTFITCGFPSVDETIDIMKGLQAGGAGVIELGVPFSDAVADGPTICKGNEVALKNNVNLSVVFDTVKRARDAGVTIPIILMGYYNPI 107
                 56789********************************************************************************************** PP

                 CCC-HHHHCHHHHHCTEEEEEETTSBCCCHHHHHHHHHHTT-EEEEEE-TTS-HHHHHHHHHH--S-EEEESTTC-SSTTS..SB-TTHHHHHHHHHHC CS
   Trp_syntA 100 lsygeerflaelkeagvdglivpDlPleeaeelveaakkkglelvflvapttsderlkevveqaegfvYvvsraGvTgaen..avaaevdelverlkkl 196
                 +syg+ + +++ ke+g++g+i++DlP+eea  ++++++k+gl++v+l+ap+t+++r+k +++ a++f+Yvvsr+G Tg ++  ++++ + e+  r++k+
  EPX70729.1 108 FSYGDKNTIQKSKEVGANGFIIVDLPPEEAVGFRAECTKEGLSFVPLIAPSTTEKRMKVLTSIADSFIYVVSRMGSTGSSAsgQINSALPEFCDRIRKY 206
                 ******************************************************************************8775589************** PP

                 T.SS-EEEESSS-SHHHHHHHHTT-SEEEE-HHHHHHHHCTTTSHHHHHHHHHHHH CS
   Trp_syntA 197 t.avPvavGFGistkeqvkqvakvadGvivGSalvkkieeeaeekeqalekleela 251
                   ++P+ vGFG++t+e+++ v +vadGv+vGS++++ + +++ +k+++   ++e++
  EPX70729.1 207 AgNTPLSVGFGVNTNEHFRYVGSVADGVVVGSKIIDVVFKAKPGKAADD--VKEYC 260
                 99************************************97665554444..44333 PP

>> PALP  Pyridoxal-phosphate dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  169.6   0.1   1.1e-53   9.6e-50       5     294 .]     347     671 ..     343     671 .. 0.87

  Alignments for each domain:
  == domain 1  score: 169.6 bits;  conditional E-value: 1.1e-53
                 SSS--EEEECCTCCCCCCE.EEEEEGGGSTTSBTTHHHHHHHHHHHHTTTTTSEEEEEBSSHHHHHHHHHHHHHT-EEEEEEETTS-...HHHHHHHHH CS
        PALP   5 igpTPlvrlprlskelgvp.lflKlEslnptgSfKdRgaeyllarlkegtgaktvveassGNhgralAaaaallGlkvtivvpadas...pekvallrl 99 
                  +p+ l  + rl++++g++ ++lK+E+ln++gS+K++     ++ +k+  ++++++e+++G+hg+a+A+aaa+lG+k+ti++ a +    + +v ++rl
  EPX70729.1 347 GRPSSLDYAGRLTEHCGGAkIWLKREDLNHGGSHKINNSIGQILIAKRLGKNRVIAETGAGQHGVATAIAAAKLGMKCTIYMGAEDCrrqSLNVFRIRL 445
                 5788888999********9*********************99999999989999999999************************99966569******* PP

                 TT-EEEEECCHHHHHHHHHHHHHHH...........STTCEE--TTTSHHHHHH.HHTHHHHHHHHTT....TTEEEEEEE-SSSHHHHHHHHHHHHHS CS
        PALP 100 lGaevvevggdydeavaaaaelaae...........gegaylvsqfdnptvieg.ygtiglEileqlg....gkpdavvvpvGgGgliaGiaaglkerr 182
                 lGa+v+ v +++++ ++a++e+++            +++a+  ++f  pt++   ++ ig E ++q++    + pdavv++vGgG++  G+  ++ke+ 
  EPX70729.1 446 LGADVIPVTSGTQTLRDAVNEALRAwvedidtthylIGSAIGPHPF--PTIVKTfQSVIGKETKAQMQekrgKLPDAVVACVGGGSNSIGLFSPFKED- 541
                 ********88888888888888888788897666666666666666..89**************77777777************************95. PP

                 TT-EEEEEEECTTCGGTTCC....S..S.SS..B........................SSS.CCSTCSCGTTCCHHHHSEEEEEEEEEEHHHHHHHHHH CS
        PALP 183 pdvrvigvepegsdalarsl....ragrrvtvpvs.......................dtiadglavgspselafelldrlvdeivtvsdeealeamrl 254
                  +v+++g e+ gs   ++ +              +                       ++i  gl+ ++++++  el + + +++++v+d+e+le+ r 
  EPX70729.1 542 KSVQLLGCEAGGSGISTDKHsatlS--------RGkigvfhgvrtyvlqredgqiqdtHSISAGLDYPAVGPELSELKETKRGDFIAVTDAECLEGFRA 632
                 559*******977777776622221........2234455677888888889999999***************************************** PP

                 HHHHHSB-B-H.HHHHHHHHHHHHHHHCCTTCEEEEEEE-B CS
        PALP 255 larregivvep.ssaaalaalklreagelkegdrvvviltg 294
                 l++ egiv+   ss+a + ++  + a++l++++++v+ ++g
  EPX70729.1 633 LCHYEGIVPALeSSHAIFGGM--ELAKSLPKDKDIVICVSG 671
                 ***********5555555555..**************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (697 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       368  (0.0205254); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.73u 0.39s 00:00:01.12 Elapsed: 00:00:00.57
# Mc/sec: 3694.06
//
Query:       EPX70730.1  [L=222]
Description: aminoacyl-tRNA hydrolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.2e-44  149.6   0.2    6.2e-44  149.0   0.2    1.3  1  PTH2      Peptidyl-tRNA hydrolase PTH2


Domain annotation for each model (and alignments):
>> PTH2  Peptidyl-tRNA hydrolase PTH2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.0   0.2   3.5e-48   6.2e-44       2     117 .]     109     222 .]     108     222 .] 0.98

  Alignments for each domain:
  == domain 1  score: 149.0 bits;  conditional E-value: 3.5e-48
                 EEEEEEESSSSS-HHHHHHHHHHHHHHHHHHHHHH.CHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTT-SEEEEEETSSSSSSTTCEEEEEEE CS
        PTH2   2 kmvlvvrkDLkmskGkiaaqcahAavalvkkllkesnekellkeWeeegqkkivlkveseeeLlelaakakalglpaalirDagrtqiepgtkTvlaig 100
                 kmvlvvr+DL+m+kGkiaaqcahAa+a++k +  + ++ ell+ We +gq+ki+l+++see+L+ l+a+a +lgl+a++i+Dagrtqi +g++Tvl+ig
  EPX70730.1 109 KMVLVVRTDLGMTKGKIAAQCAHAALACYKLAAAT-DP-ELLQLWEAAGQAKITLQAQSEEQLQILQAQAMSLGLSARIIHDAGRTQIFSGSATVLGIG 205
                 9*****************************99998.88.8*********************************************************** PP

                 EEEHHHHHHHHTTSEB- CS
        PTH2 101 PapksivdkvtgkLkll 117
                 P+p s+v++vtg+L+l+
  EPX70730.1 206 PGPVSVVNEVTGSLRLF 222
                 ***************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       700  (0.0390429); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1564.85
//
Query:       EPX70731.1  [L=264]
Description: U1 snRNP-associated protein Usp101 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.3e-26   90.5   5.5    1.2e-25   89.9   5.5    1.3  1  U1snRNP70_N  U1 small nuclear ribonucleoprotein of 70kDa MW N
      7e-18   64.2   0.0    1.1e-17   63.6   0.0    1.3  1  RRM_1        RNA recognition motif. (a.k.a. RRM, RBD, or RNP 
  ------ inclusion threshold ------
        2.6    8.1   8.8        4.4    7.4   8.8    1.3  1  Caprin-1_C   Cytoplasmic activation/proliferation-associated 


Domain annotation for each model (and alignments):
>> U1snRNP70_N  U1 small nuclear ribonucleoprotein of 70kDa MW N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.9   5.5   2.1e-29   1.2e-25       1      93 []       3      91 ..       3      91 .. 0.96

  Alignments for each domain:
  == domain 1  score: 89.9 bits;  conditional E-value: 2.1e-29
  U1snRNP70_N  1 skLPpnLlkLFaprpplpylppldydpekrktkkkitGvaaflselkedeeeqeppektetkeekkererkekkekkeekleealeeydPkeD 93
                 +kLP+ +l+LFaprppl+ylpp+d +pekr+t ++++Gva++l+    +++++++++ tet ee ++r+++e+k k+ e+l+++ ++++P++D
   EPX70731.1  3 EKLPSTVLALFAPRPPLRYLPPTDAPPEKRST-PHLSGVAKYLQLA--KTYNDDYQP-TETLEESRIRRKEERKLKQRERLRSMTRQWNPDDD 91
                 59******************************.99***********..568888888.*********************************98 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.6   0.0   1.8e-21   1.1e-17       1      69 [.     102     171 ..     102     172 .. 0.99

  Alignments for each domain:
  == domain 1  score: 63.6 bits;  conditional E-value: 1.8e-21
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrel 69 
                 lf+g L++ + e ++++ +  +Gpi+++++vrd +tgks+g+afV Fe ++d ++A +a +g  l+gr++
  EPX70731.1 102 LFIGRLSYATREGDIEKELIRYGPIERVRVVRDkSTGKSRGYAFVVFERERDLKAAYRAADGLILQGRRI 171
                 8*******************************************************************98 PP

>> Caprin-1_C  Cytoplasmic activation/proliferation-associated protein-1 C term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   8.8   0.00074       4.4     261     300 ..     202     240 ..     195     261 .. 0.73

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.00074
  Caprin-1_C 261 rngRglingYrgpsngfkgGydgYRppfsnapnggYgqlq 300
                 r +R     Yrg   gf+gGy g+R+  + + ++  + + 
  EPX70731.1 202 RPPRERGSRYRGE-SGFRGGYRGFRGGPPPTGSSLSSRMS 240
                 667777889****.9***********99988777655554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       671  (0.0374254); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 1987.85
//
Query:       EPX70732.1  [L=713]
Description: mRNA decapping complex catalytic subunit Dcp2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-31  108.8   0.9    3.2e-31  107.5   0.9    1.7  1  DCP2      Dcp2, box A domain
    5.6e-15   55.5   0.0    1.1e-14   54.5   0.0    1.5  1  NUDIX     NUDIX domain
  ------ inclusion threshold ------
       0.12   10.4   0.1       0.16    9.9   0.1    1.1  1  Bunya_G1  Bunyavirus glycoprotein G1


Domain annotation for each model (and alignments):
>> DCP2  Dcp2, box A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.5   0.9   5.3e-35   3.2e-31       2      83 .]      11      92 ..      10      92 .. 0.99

  Alignments for each domain:
  == domain 1  score: 107.5 bits;  conditional E-value: 5.3e-35
                HHHHHHHHHTTTS-HHHHTSHHHHHHHHHHHHHHHHHTHHHHTTTS----HHHHHHHHHCCSCCCHHCCCHCHHHHHHHHHH CS
        DCP2  2 iLddlavrFilnlpeeeleslerlffqleeAhWfYeDfvreknpklpslklkeFaeklfekcpllkklkedvdeileefkeY 83
                +Lddl++rFilnlp ee++s+erl+fq+e+AhWfYeDf+r +n +lpsl l+ F+++lf++cpll+k+++ ++e++++f +Y
  EPX70732.1 11 VLDDLSARFILNLPAEEQSSVERLCFQIEQAHWFYEDFIRAQNDQLPSLGLRVFSARLFAHCPLLWKWSKVHEEAFDDFLRY 92
                8******************************************9************************************99 PP

>> NUDIX  NUDIX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.5   0.0   1.9e-18   1.1e-14       5     118 ..      98     210 ..      94     221 .. 0.75

  Alignments for each domain:
  == domain 1  score: 54.5 bits;  conditional E-value: 1.9e-18
                 EEEEEEEETTSE.EEEEEESSSSTTTEESSEEECBTTS.HHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE.EEECSGCSSTS CS
       NUDIX   5 avgvvllnekge.vLlvrrskkpfpgWelPgGkvepgE.tpeeAArREleEEtGleaellellgrlhylapydgpygdeheilyvfl.eevegelepnd 100
                   g+++l++  + +Llv+   k  +gW +P+Gk++++E ++ ++A+RE+ EEtG+  +l+  +++  +++ ++++ g ++  ly+    +++   e + 
  EPX70732.1  98 VRGAIMLDKSLQrCLLVKGW-KASSGWGFPKGKIDKDEsDV-DCAVREVYEETGF--DLTGHINS--NEYIDMTIRG-QNVRLYIIPeMSLDTAFESRT 189
                 5678888888555*******.99999************777.************9..44444442..3334444555.999999999666666666669 PP

                 TTTEEEEEEEEHHHH...HHH CS
       NUDIX 101 enevsevrwvpleel...lke 118
                 ++e+s+++w+ l++l   +k 
  EPX70732.1 190 RKEISKIEWHMLTDLptyKKS 210
                 ***************544333 PP

>> Bunya_G1  Bunyavirus glycoprotein G1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.1   2.7e-05      0.16     386     455 ..     169     232 ..     152     260 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 2.7e-05
    Bunya_G1 386 ktvrypinpdvvsdcvwe.vsrksiakidvqsledieqykkaltdklttslelykyaklknlphikpvyky 455
                 + vr  i p++  d ++e  +rk i+ki+ + l d+  ykk+ td +++ + +        +p + p+ k+
  EPX70732.1 169 QNVRLYIIPEMSLDTAFEsRTRKEISKIEWHMLTDLPTYKKSKTDTVKNKFYM-------VIPFLAPLKKW 232
                 5688899999999****9889***********************998865432.......24444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (713 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       440  (0.0245412); expected 358.6 (0.02)
Passed bias filter:                      292  (0.0162865); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.41
# Mc/sec: 5195.18
//
Query:       EPX70733.1  [L=257]
Description: SUMO-targeted ubiquitin-protein ligase subunit Rfp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.4e-06   28.2   6.1    2.1e-06   27.6   6.1    1.3  1  zf-RING_5       zinc-RING finger domain
      0.002   18.1   2.8      0.004   17.1   2.8    1.6  1  zf-RING_UBOX    RING-type zinc-finger
     0.0035   17.6   5.2      0.006   16.9   5.2    1.4  1  zf-RING_2       Ring finger domain
  ------ inclusion threshold ------
      0.014   15.2   6.9      0.038   13.8   6.9    1.7  1  zf-C3HC4_3      Zinc finger, C3HC4 type (RING finger)
      0.018   14.9   1.7      0.043   13.6   1.7    1.6  1  zinc_ribbon_12  Probable zinc-ribbon domain
      0.045   13.6   4.5       0.17   11.7   4.8    1.8  2  zf-C3HC4        Zinc finger, C3HC4 type (RING finger)
       0.13   12.3   2.7       0.23   11.5   2.7    1.3  1  Cytochrome_C7   Cytochrome c7 and related cytochrome c
       0.15   12.0   6.1       0.87    9.5   2.0    2.3  2  Prok-RING_4     Prokaryotic RING finger family 4
       0.23   11.1   0.4        4.6    6.9   0.1    2.4  2  zf_UBZ          Ubiquitin-Binding Zinc Finger
       0.44   10.7   4.8       0.56   10.4   2.2    2.3  2  zf-C3HC4_4      zinc finger of C3HC4-type, RING
       0.63    9.9   6.3        2.4    8.1   6.4    1.9  1  zf-C3HC4_2      Zinc finger, C3HC4 type (RING finger)
        2.8    7.9   8.0        4.2    7.3   0.6    2.8  3  Zn_ribbon_SprT  SprT-like zinc ribbon domain


Domain annotation for each model (and alignments):
>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   6.1   1.4e-09   2.1e-06       2      41 ..     192     239 ..     191     244 .. 0.87

  Alignments for each domain:
  == domain 1  score: 27.6 bits;  conditional E-value: 1.4e-09
   zf-RING_5   2 CnkCfekl.....skeekfyltsCgHifCekClkkll...ekeavCpi 41 
                 C++C+e+l      +++ ++ t+CgH++C +C k l+    +ea+C +
  EPX70733.1 192 CPRCHEELgasksAEKSSVWATKCGHVYCGSCSKVLKssrRPEARCAA 239
                 *********987666667******************999999999977 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   2.8   2.7e-06     0.004       1      38 [.     192     237 ..     192     238 .. 0.77

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 2.7e-06
  zf-RING_UBOX   1 CpIClelft.......dPlv..lpCGHtFCreClwelskslegafkC 38 
                   Cp C e++           v  ++CGH++C +C + l++s++++ +C
    EPX70733.1 192 CPRCHEELGasksaekS-SVwaTKCGHVYCGSCSKVLKSSRRPEARC 237
                   99999999987776431.344347*********98788888888888 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   5.2     4e-06     0.006       2      40 ..     191     237 ..     190     242 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 4e-06
   zf-RING_2   2 eCpICleelssads.....vlllpCgHvfhreClerwlrssst....C 40 
                 +Cp C eel  ++s     v +++CgHv++ +C  + l+ss++    C
  EPX70733.1 191 TCPRCHEELGASKSaekssVWATKCGHVYCGSCS-KVLKSSRRpearC 237
                 7********655553445444668*********6.5598888777777 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   6.9   2.5e-05     0.038       4      42 ..     191     239 ..     188     248 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 2.5e-05
                 B-TTTSS........SBS-EEETTEEEEEE-HHHHHHHHH...TT-B-TT CS
  zf-C3HC4_3   4 eCviCle........rprnvvllpCgHlvlCeeCaekllk...rkkkCpi 42 
                 +C+ C+e        ++++v   +CgH+ +C +C++ l++    +++C  
  EPX70733.1 191 TCPRCHEelgasksaEKSSVWATKCGHV-YCGSCSKVLKSsrrPEARCAA 239
                 79999997776666557889999*****.*********987766677765 PP

>> zinc_ribbon_12  Probable zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   1.7   2.9e-05     0.043       7      42 ..     190     228 ..     189     230 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 2.9e-05
  zinc_ribbon_12   7 vvCsnCfelLqlP...kkflllkkkqqklrCGaCsevls 42 
                     ++C  C e L      +k  +   k+  + CG+Cs+vl+
      EPX70733.1 190 MTCPRCHEELGASksaEKSSVWATKCGHVYCGSCSKVLK 228
                     589999999977633356677778999**********98 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.2      0.86   1.3e+03      36      41 .]     190     195 ..     182     195 .. 0.76
   2 ?   11.7   4.8   0.00012      0.17       1      34 [.     192     232 ..     192     239 .. 0.72

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.86
                 B--TTT CS
    zf-C3HC4  36 vkCPlC 41 
                  +CP C
  EPX70733.1 190 MTCPRC 195
                 57**99 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 0.00012
                 -TTT-S--SS-E........E-TTS--B-CHHHHHHHHCTS CS
    zf-C3HC4   1 CpiCleeakepn.......elleCkHsfCskCirkilksrk 34 
                 Cp C ee+   +        +++C+H +C +C + + +sr+
  EPX70733.1 192 CPRCHEELGASKsaekssvWATKCGHVYCGSCSKVLKSSRR 232
                 7777777766666777777899**********987777643 PP

>> Cytochrome_C7  Cytochrome c7 and related cytochrome c
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   2.7   0.00016      0.23      12      69 ..     188     238 ..     178     240 .. 0.69

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00016
  Cytochrome_C7  12 tgykCtdCHskl.feskakkkmaemekgkskkaevesltCgaCHdgknafsvakkaeCa 69 
                    ++++C  CH++l +        ++ ek+++ +++  ++ Cg+C +  + + ++ +a+Ca
     EPX70733.1 188 VTMTCPRCHEELgA-------SKSAEKSSVWATKCGHVYCGSCSKVLKSS-RRPEARCA 238
                    4689********22.......334445555556667788****7766665.56777776 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.1     0.025        37      30      42 ..     189     201 ..     182     207 .. 0.76
   2 ?    9.5   2.0   0.00058      0.87      14      32 ..     213     231 ..     202     251 .. 0.77

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.025
  Prok-RING_4  30 lssCPlCqrrisk 42 
                    +CP C++++ +
   EPX70733.1 189 TMTCPRCHEELGA 201
                  449*****99865 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00058
  Prok-RING_4  14 epCgHlvCkeCfdskdlss 32 
                    CgH+ C +C +  ++s+
   EPX70733.1 213 TKCGHVYCGSCSKVLKSSR 231
                  56**********9999883 PP

>> zf_UBZ  Ubiquitin-Binding Zinc Finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.1    0.0031       4.6       2      12 ..     189     199 ..     188     206 .. 0.77
   2 ?    2.1   0.0     0.096   1.4e+02       2      19 ..     217     234 ..     216     234 .. 0.88

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0031
      zf_UBZ   2 tylCerCgkei 12 
                 t +C+rC++e+
  EPX70733.1 189 TMTCPRCHEEL 199
                 679*****987 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.096
      zf_UBZ   2 tylCerCgkeipeselqE 19 
                 ++ C  C k + +s ++E
  EPX70733.1 217 HVYCGSCSKVLKSSRRPE 234
                 578*********999998 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0         1   1.5e+03      37      42 .]     190     195 ..     185     205 .. 0.76
   2 ?   10.4   2.2   0.00038      0.56      15      39 ..     214     237 ..     211     243 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 1
  zf-C3HC4_4  37 llCplC 42 
                 ++Cp C
  EPX70733.1 190 MTCPRC 195
                 566666 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00038
  zf-C3HC4_4  15 eCGhsfClsCisslqkepdgeqllC 39 
                 +CGh++C sC + l  +   e  +C
  EPX70733.1 214 KCGHVYCGSCSKVLKSSRRPE-ARC 237
                 7*********87776655444.455 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   6.4    0.0016       2.4      13      28 ..     210     225 ..     191     237 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0016
  zf-C3HC4_2  13 svvtpCgHvfCqkCil 28 
                 +  t+CgHv+C +C +
  EPX70733.1 210 VWATKCGHVYCGSCSK 225
                 4568**********75 PP

>> Zn_ribbon_SprT  SprT-like zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.5       4.1   6.2e+03      15      23 ..      60      68 ..      56      76 .. 0.63
   2 ?    4.8   0.0     0.018        27      26      35 ..     191     200 ..     177     203 .. 0.78
   3 ?    7.3   0.6    0.0028       4.2       7      27 ..     220     237 ..     218     241 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 4.1
  Zn_ribbon_SprT 15 thhlsirrh 23
                     +++  rr 
      EPX70733.1 60 SRRRLRRRR 68
                    444444443 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.018
  Zn_ribbon_SprT  26 rCrrCkgtLr 35 
                      C+rC+++L+
      EPX70733.1 191 TCPRCHEELG 200
                     5999999997 PP

  == domain 3  score: 7.3 bits;  conditional E-value: 0.0028
  Zn_ribbon_SprT   7 CtgCgreythhlsirrhnYrC 27 
                     C++C    ++  s+rr   rC
      EPX70733.1 220 CGSCS---KVLKSSRRPEARC 237
                     66666...******9998899 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       724  (0.0403815); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        66  (0.00368119); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.48u 0.28s 00:00:00.76 Elapsed: 00:00:00.47
# Mc/sec: 1659.75
//
Query:       EPX70734.1  [L=185]
Description: recombination protein Irc6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       479  (0.0267165); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.44
# Mc/sec: 1269.30
//
Query:       EPX70735.1  [L=84]
Description: transporter Yos1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.7e-31  106.4   1.7    7.6e-31  106.2   1.7    1.0  1  Yos1      Yos1-like


Domain annotation for each model (and alignments):
>> Yos1  Yos1-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.2   1.7   4.2e-35   7.6e-31       1      80 []       7      84 .]       7      84 .] 0.95

  Alignments for each domain:
  == domain 1  score: 106.2 bits;  conditional E-value: 4.2e-35
        Yos1  1 LgslleaalLliNaiaiLsedRfLariglssssaesafgeseeasvkakiinliaavrtlmripLiviNilvivyelvlG 80
                +g++l+++lLl+Na+aiLsedRfL r+g+s+ +++ +fge +++++k++i++li+avrt+m +pLi+iN++vi+y+l+lG
  EPX70735.1  7 FGNILYIILLLLNAVAILSEDRFLGRLGWSQ-NTSYGFGE-SQDTIKSRILHLIRAVRTVMTFPLIAINTVVIIYNLILG 84
                699**************************77.56899996.888***********************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       446  (0.0248759); expected 358.6 (0.02)
Passed bias filter:                      258  (0.0143901); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.42
# Mc/sec: 597.32
//
Query:       EPX70736.1  [L=1036]
Description: hypothetical protein SOCG_04221 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-51  173.6  12.2    2.2e-23   83.0   0.7    3.5  3  MIF4G     MIF4G domain
    7.5e-23   81.8   4.7    7.5e-23   81.8   4.7    2.7  2  Upf2      Up-frameshift suppressor 2


Domain annotation for each model (and alignments):
>> MIF4G  MIF4G domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.1   2.4e-06     0.022       1     115 [.      41     174 ..      41     188 .. 0.81
   2 !   82.0   1.2   4.9e-27   4.4e-23       2     211 ..     427     613 ..     426     614 .. 0.97
   3 !   83.0   0.7   2.4e-27   2.2e-23      10     206 ..     638     829 ..     635     833 .. 0.97

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 2.4e-06
                 HHHHHHHHHCHTTTTHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCG.....GGHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHC....... CS
       MIF4G   1 lkkvkgilnklskenfevlikqllklamdddknelkevielifekaveep.....sfsplyarlcgklnsrfqqnFrikllnklqeefekry....... 87 
                 lkk++ +++++  + + ++++ ++k ++++  +  k v e+i +++++ +     +++++ +r++  l++rf+  F + ll++l+  +           
  EPX70736.1  41 LKKNTAFMKRCRTSLTADNYDLFIKEIKSL--SLEKFVPEIILSITEGLSkcrsvKDIQAAVRIVFFLYQRFSVSFIRPLLANLYSMLYPSPadsisgn 137
                 68999*************************..9**************************************************9988887556666666 PP

                 .........-S-HHHHHHHHHHHHHHHHHHHHHHHHH CS
       MIF4G  88 .........eleneleenedgnrrrrlglvrflgelf 115
                            e+ +++  ++n  ++++l+r + e++
  EPX70736.1 138 lsrsssavtVSESISNKGTSVNIAKTRALLRIFVEFW 174
                 6666666654444455555566666666666666655 PP

  == domain 2  score: 82.0 bits;  conditional E-value: 4.9e-27
                 HHHHHHHHCHTTTTHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHC-S-HHHHHHHHHH CS
       MIF4G   2 kkvkgilnklskenfevlikqllklamdddknelkevielifekaveepsfsplyarlcgklnsrfqqnFrikllnklqeefekryeleneleenedgn 100
                 + ++ + n +s e++++ + ++l l+ +    +++ vi+ +++++++++  +p+y+r+++ + +  + ++ ++l+++ + +f++      +++++++ +
  EPX70736.1 427 NLLQALPNFMSAEQVDQAALEFLFLNTKA---SRNRVIKAFCNIPRTSSFLVPYYIRFARIMTPVAP-DIASALVEHARGAFRR------MMNRKAKHE 515
                 567899999*************9999886...***********************************.****************......********* PP

                 HHHHHHHHHHHHHHHHTTSSEHHHHHHHHHHHHHGGCCCCSCCHSCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHCSSSSHHHH CS
       MIF4G 101 rrrrlglvrflgelfklkmltskilldclkellssltketaddppqdleeieilltllttigktlennekakkeldqffkriqkiledatrqelssrir 199
                 + +r+ +vr+++el k+ +++ + +++c+k +l ++t           +++e+l  ll+++g+ l++++k++ ++  f++ +qk+++    + l+s+ +
  EPX70736.1 516 YDTRTLIVRYISELTKFRLMSFSHVFECYKMCLLDFTS----------FDLEVLSLLLENCGRFLYRFPKSSLQISSFLEVVQKKKLA---AALPSQEQ 601
                 **************************************..........***************************************9...9******* PP

                 HHHHHHHHHHHT CS
       MIF4G 200 fmlkdlielkkn 211
                 + l++ ++++++
  EPX70736.1 602 LILDNALYFVNP 613
                 *****9999886 PP

  == domain 3  score: 83.0 bits;  conditional E-value: 2.4e-27
                 CHTTTTHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHC-S-HHHHHHHHHHHHHHHHHH CS
       MIF4G  10 klskenfevlikqllklamdddknelkevielifekaveepsfsplyarlcgklnsrfqqnFrikllnklqeefekryeleneleenedgnrrrrlglv 108
                 +ls +n++  i  l+k+ ++        ++++++e+++ +++ ++  a l++ l+++++ +F+i++++ ++  +        ++ + + g++++rl+ +
  EPX70736.1 638 RLSETNLSATIALLRKFDWKA---DFEILYSTFMEVWNMKYECLNSFASLIASLYKTHP-DFCIYVIDDTVDSLLT------SIDSGSFGDSQKRLAQA 726
                 68999***************8...899********************************.****************......***************** PP

                 HHHHHHHHTTSSEHHHHHHHHHHHHHGGCCCCSC........CHSCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHCSSSSHHHH CS
       MIF4G 109 rflgelfklkmltskilldclkellssltketad........dppqdleeieilltllttigktlennekakkeldqffkriqkiledatrqelssrir 199
                 +fl el++  +l+ + ++ +l+ ll+  + ++          + +++l+++++++ ll t+g  l  + k++k + +++  +q++++ +  +e++ +++
  EPX70736.1 727 KFLAELYCVRLLDVRSIIGILFYLLPPDKFQSILqfsptaatNKENELFRLRMIALLLSTCGSSLV-RSKTRKTMLTYLLAYQCYFLAQ--PEVPLDMQ 822
                 ***************************99977779*******************************.*********************7..******** PP

                 HHHHHHH CS
       MIF4G 200 fmlkdli 206
                 f  +d++
  EPX70736.1 823 FEFDDVV 829
                 **99986 PP

>> Upf2  Up-frameshift suppressor 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.3     0.084   7.5e+02      15     112 ..     370     473 ..     349     476 .. 0.62
   2 !   81.8   4.7   8.3e-27   7.5e-23      11     136 .]     922    1034 ..     901    1034 .. 0.80

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.084
        Upf2  15 peeeeeFerelakmmaesl.esrknerkkapqldvplPmnvk..kkkkka.eesesssekaaeeaeeepeaekskkvaFtLL.tk.kgnKqqtktlevP 107
                 +eee +F + +  +    l e++++e+++ ++++++  ++ +  ++k ++ ++ ++++  +a ++  ++e+ ++   +F +L tk ++n+      ++P
  EPX70736.1 370 SEEEHQFYETFPELPNLELaEKKSFETSGDQEVKAEASVEDSqkHTKPSKsVSVKIDNLLQALPNFMSAEQVDQAALEFLFLnTKaSRNRVIKAFCNIP 468
                 478888888888887655536677777776666555554444333333333444455556677777888888888888888834434444444445788 PP

        Upf2 108 sdssl 112
                 ++ss+
  EPX70736.1 469 RTSSF 473
                 88877 PP

  == domain 2  score: 81.8 bits;  conditional E-value: 8.3e-27
        Upf2   11 k.evdpeeeeeFerelakmmaeslesrknerkkapqldvplPmnvkkkkkkaeesesssekaaeeaeeepeaekskkvaFtLLtkkgnKqqtktlev 106 
                  +  +++   +e+++el++mm +sl+sr +er    ++dvplP++++          s++++ ++ ++ ++e  ++++v+FtLLtkkgnKq ++ l+v
  EPX70736.1  922 ElDEEHIHTMEIDEELSRMMNDSLSSRAHERGI--AFDVPLPLRST----------SGDTSFSDLNNLSTE--NEENVKFTLLTKKGNKQRSQVLDV 1004
                  233344788999*******************93..48*****7763..........333333444444433..4499******************** PP

        Upf2  107 PsdsslaqstreqeeaekeEkeriKrlvLn 136 
                  P  s laqst++++e+e  E++r+K++vLn
  EPX70736.1 1005 PYHSVLAQSTKSRQEEELIERKRMKEMVLN 1034
                  *****************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1036 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1243  (0.069329); expected 358.6 (0.02)
Passed bias filter:                      565  (0.0315132); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.85u 0.31s 00:00:01.15 Elapsed: 00:00:00.51
# Mc/sec: 6157.23
//
Query:       EPX70737.1  [L=501]
Description: glucosyltransferase Alg8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   7.9e-159  529.7  34.1   9.2e-159  529.5  34.1    1.0  1  Alg6_Alg8  ALG6, ALG8 glycosyltransferase family


Domain annotation for each model (and alignments):
>> Alg6_Alg8  ALG6, ALG8 glycosyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  529.5  34.1  5.2e-163  9.2e-159       2     482 ..      15     490 ..      14     492 .. 0.95

  Alignments for each domain:
  == domain 1  score: 529.5 bits;  conditional E-value: 5.2e-163
   Alg6_Alg8   2 lllklllipmyrStDFEvqRnWlaiThslplseWytedlseWtLDYPPlfAYfeyllskvakkvl.dpemlalessrgyesestklFqRltVivsdlll 99 
                 +++k+ll+p+yrStDFEv+RnWlaiThslp+s+Wyt + seWtLDYPP+fAYfe++ls++ak +  d eml+   + +y s+s+++FqR +Vivs+l+l
  EPX70737.1  15 TFMKILLFPCYRSTDFEVHRNWLAITHSLPISQWYTTAISEWTLDYPPFFAYFEFVLSWIAKLLGfDTEMLNP-YNLNYVSPSVVIFQRSSVIVSELVL 112
                 899**********************************************************77668******9.************************* PP

   Alg6_Alg8 100 fipavlllvekakkkskkkkrlvllllillspgllliDhiHFQYNgvllGllllsiaallkkkdlllgallFvllLnfKqialylApayfvylLrkycl 198
                 + + +  +v  +  ++++ +++++++ ++lspg+++iDhiHFQYNg+l+Gll++s++ +++++ l l+a++F++l++fK+i+ly+Apayfvyl+r ycl
  EPX70737.1 113 LWA-LREYV-YSYPENNRGNAVLTAIDTFLSPGFIIIDHIHFQYNGFLFGLLIWSLILAKHNRLL-LSAAVFATLICFKHIFLYVAPAYFVYLFRVYCL 208
                 ***.88887.34445578899999999**************************************.6******************************** PP

   Alg6_Alg8 199 kkskkklkvslkrllklgvvvlavfallfgPflasgeqlkqvlsRlFPfkRGLfedyvApNfWalynvvdkvlevvlk........kaevasltrglvq 289
                 + s   ++ ++++++klg++v ++f+l+fgP++++g q++q+++RlFPf+RGL+++y+ApNfWaly+++d+v+ ++l            +++ trglv+
  EPX70737.1 209 SVS--GFRPQIFNTIKLGLTVSSIFLLAFGPWIYMG-QMPQLFARLFPFSRGLCHAYWAPNFWALYSFFDRVAYAFLPrlgysfpeVPFTNAPTRGLVG 304
                 755..6999************************977.*************************************77779***99965667889****** PP

   Alg6_Alg8 290 dvsflvlpeilpkltllltllailpslvklllkpskklfllalvlcalsfFlfsfhVHEKaiLlvllpltllalesredlslvlllsvvgtfslfPLlf 388
                 d++f+vlp+++p +t+ l+l+++  +l+kl+++p+++ f+ a +lc++ +Flf++hVHEKaiL+v++p+++l l +r++l++++ l+v+g++sl+PLlf
  EPX70737.1 305 DTTFAVLPNVSPSFTFYLCLALQGCVLIKLFVRPTWRVFVGATTLCGWISFLFGWHVHEKAILIVIIPFSILSLIDRRYLEAFRPLAVAGYISLLPLLF 403
                 *************************************************************************************************** PP

   Alg6_Alg8 389 kdgellikvvltllwllllllslkklvkkslkkkkkkvlldrleklyllsllallvllv.llellvlkkpperlpflplllisvycsvgvfvlfl 482
                 +++e++ik+++t +w+ +ll+ ++k +  +    k+++ll+r++ +y+++++ +l +++ +l+ +v++    r++flpl+l s+y+++g+f++f+
  EPX70737.1 404 TSQEAPIKYLFTGAWVAVLLH-FDKSAPVP---VKRVFLLNRVNLAYVAGFV-PLFIYNsFLHNFVFG---GRYEFLPLMLLSTYSAWGIFCAFI 490
                 ***************999997.66666666...3579***************.9999999******77...8*******************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (501 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       508  (0.028334); expected 358.6 (0.02)
Passed bias filter:                      202  (0.0112667); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 3485.08
//
Query:       EPX70738.1  [L=320]
Description: endodeoxyribonuclease Pnu1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.7e-65  219.9   0.0    4.4e-65  219.7   0.0    1.1  1  Endonuclease_NS  DNA/RNA non-specific endonuclease


Domain annotation for each model (and alignments):
>> Endonuclease_NS  DNA/RNA non-specific endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  219.7   0.0   2.5e-69   4.4e-65       2     224 ..      60     289 ..      59     291 .. 0.97

  Alignments for each domain:
  == domain 1  score: 219.7 bits;  conditional E-value: 2.5e-69
                      HHCCTTCS-TTSTTSEEEE-SSEEEEEETTTTEEEEEEEEESCGGGSS-TT--GG---B--TTS-CCSG---HHHCTTS.SSEEEESS-GGG-- CS
  Endonuclease_NS   2 sseltskgfptsgddkvlfykgfsvsynkerriplwvaenldgasvnasaaerrgpsfkadpripqlsfrtqysdyagskgldRGHLaaaadfk 95 
                      ++++ ++g+p++++d  +  +g+ +++++++r+p+++ e+++ + +++++++r+ ++f++d++ip+  f+++ sdy+gs g+dRGH+++aad+k
       EPX70738.1  60 PAKFLQYGNPGPVAD-QRVAHGYMSVFDRRTRNPYYTVETITEELLEQRKGNRKFSEFRQDTNIPEM-FQAKLSDYRGS-GYDRGHQTPAADCK 150
                      67899*********9.79*********************************99**************.9999*******.9************* PP

                      SSHHHHHHTTBGGGEEEE-HH.HHCTHHHHHHHHHHHHHCTTS.EEEEEEEEES-ECC-........EEEETT.TTEE--SEEEEEEEEECCTT CS
  Endonuclease_NS  96 fsteanaatfnytNivPQvag.fNqgnWlrlEnlvrklvrkydrklyvvtGpvfvprll........yeligk.nkvavPthfwkvilsedadd 179
                      fs+ea+++tf ++N++PQv + fN+++W++lE+++r+l++ky+ +++++tGp++ p+++        y++ig+  +vavPthf+kvi+ + + +
       EPX70738.1 151 FSQEAMDDTFLLSNMCPQVGEgFNRNYWAYLEDWCRSLTKKYE-SVTIMTGPLYIPQKNekgqwevrYRMIGNpPNVAVPTHFFKVIIAKEKGK 243
                      *******************************************.********************************************999944 PP

                      T.CEECCEEEEEESSSS-TTS-GGGGB--HHHHHHHHT--TTTTS- CS
  Endonuclease_NS 180 k.gtlnaaafllpnepiaderpltayqvpvdeleeltGldffcnva 224
                      +  +    af+lpn+piad+ pl++++vpv+++e+ +Gl++ +nv+
       EPX70738.1 244 DsMKPVVGAFVLPNKPIADNFPLKNFAVPVEVIERSSGLEILHNVS 289
                      4699999************************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       481  (0.026828); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2318.51
//
Query:       EPX70739.1  [L=95]
Description: TIM22 inner membrane protein import complex subunit Tim13 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    9.5e-25   86.0   0.3    1.2e-24   85.7   0.3    1.1  1  zf-Tim10_DDP  Tim10/DDP family zinc finger
  ------ inclusion threshold ------
      0.082   13.3   0.2      0.092   13.2   0.2    1.2  1  DUF3398       Domain of unknown function (DUF3398)


Domain annotation for each model (and alignments):
>> zf-Tim10_DDP  Tim10/DDP family zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.7   0.3   1.4e-28   1.2e-24       1      63 [.      23      84 ..      23      85 .. 0.97

  Alignments for each domain:
  == domain 1  score: 85.7 bits;  conditional E-value: 1.4e-28
  zf-Tim10_DDP  1 qqleqeqqvanaqelvnkltekCfkkCigkypgssLdsseesCldnCvdryldvsnlvskrlq 63
                  +q++qe++va+a el++k++e+Cf+kC+++ pgss++ +e+ C+++C++ry+d++n+vs+++ 
    EPX70739.1 23 KQIRQELAVAQAGELISKINESCFDKCVPQ-PGSSFSDNEKGCVSKCMERYMDAWNVVSRTYI 84
                  699*************************99.******************************96 PP

>> DUF3398  Domain of unknown function (DUF3398)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.2     1e-05     0.092      51      84 ..      49      85 ..      17      94 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1e-05
     DUF3398 51 tvPe..eaekeldsl.VreciktYtsdwkvveykyek 84
                +vP+  ++ ++ ++  V +c++ Y++ w+vv++ y +
  EPX70739.1 49 CVPQpgSSFSDNEKGcVSKCMERYMDAWNVVSRTYIS 85
                5666432223333445*****************9954 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       684  (0.0381505); expected 358.6 (0.02)
Passed bias filter:                      407  (0.0227007); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 695.68
//
Query:       EPX70740.1  [L=272]
Description: G-protein coupled receptor Stm1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.5e-35  120.0  21.8      1e-18   66.9   4.8    2.9  3  PQ-loop          PQ loop repeat
      0.002   19.0   5.5       0.54   11.1   0.3    2.7  3  ER_lumen_recept  ER lumen protein retaining receptor
  ------ inclusion threshold ------
      0.012   15.6   1.7      0.012   15.6   1.7    2.9  3  MtN3_slv         Sugar efflux transporter for intercellular e
      0.061   13.2   0.2       0.15   11.9   0.2    1.6  1  COX14            Cytochrome oxidase c assembly
        1.2    8.9   6.8         30    4.4   5.0    3.2  2  DUF2157          Predicted membrane protein (DUF2157)


Domain annotation for each model (and alignments):
>> PQ-loop  PQ loop repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.9   4.8   2.8e-22     1e-18       1      57 [.      17      73 ..      17      77 .. 0.95
   2 ?   -3.4   0.3       2.5   8.9e+03      44      53 ..     150     159 ..     144     163 .. 0.50
   3 !   63.6   3.5   2.9e-21   1.1e-17       3      55 ..     178     230 ..     176     235 .. 0.94

  Alignments for each domain:
  == domain 1  score: 66.9 bits;  conditional E-value: 2.8e-22
     PQ-loop  1 lseilgyislvlwlvsyiPQiikNykrkSteGlSilflllwllGdilsllylilngf 57
                ls++lg +sl +w+v++iPQ+++Nyk++S + +S+lfl++wl+Gdi++++++i+ + 
  EPX70740.1 17 LSSFLGALSLGCWVVLLIPQLLENYKNQSSDSISPLFLIMWLVGDIFNIFGSIWGNV 73
                689*************************************************99765 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2.5
     PQ-loop  44 Gdilsllyli 53 
                   i+ +++++
  EPX70740.1 150 VLITTFIGNV 159
                 3344444443 PP

  == domain 3  score: 63.6 bits;  conditional E-value: 2.9e-21
     PQ-loop   3 eilgyislvlwlvsyiPQiikNykrkSteGlSilflllwllGdilsllyliln 55 
                 +i g +s +l++++++PQiikNyk+kSt+GlSi f++l +lG+++++l++++ 
  EPX70740.1 178 FIAGCTSSILYFFARFPQIIKNYKSKSTDGLSIIFFILSMLGNTAYTLSILVY 230
                 6899*********************************************9975 PP

>> ER_lumen_recept  ER lumen protein retaining receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.1    0.0003       1.1      94     146 ..      18      70 ..       4      71 .. 0.84
   2 !   11.1   0.3   0.00015      0.54      36     135 ..      77     218 ..      70     230 .. 0.69
   3 ?    0.7   0.3      0.24   8.7e+02       3      51 ..     206     260 ..     204     270 .. 0.40

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.0003
  ER_lumen_recept  94 levlwtfsiiLesvAilPQlillqktgevesltshyvfalglyRalyllnWiv 146
                       ++l + s+    v ++PQl+  +k+++ +s+   +++++ +  +++++ +i+
       EPX70740.1  18 SSFLGALSLGCWVVLLIPQLLENYKNQSSDSISPLFLIMWLVGDIFNIFGSIW 70 
                      4556666666666779********************************98886 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.00015
  ER_lumen_recept  36 ntlmkialillsiyiiyl.ilvkfketyekekDtfkle..................................llivpslllallfhpg...... 88 
                       +++++++i + +++++   +++ k  +++++ +  l                                   ++++ +++  +l+ +       
       EPX70740.1  77 VLVLAVYYIGADFFLLLQvYYYRWKAFRKSKQEHEPLLqsrsleeglhepldknliwwdrlsfrgqfgfmacVVLITTFIGNVLISNAssdkpd 170
                      4578899999999966552555555555444433333355688899999999999999999999998888855555555555555555688887 PP

  ER_lumen_recept  89 .ssktllevlwtfsiiLesvAilPQlillqktgevesltshyvfalgl 135
                       + ++   +  + s iL  +A +PQ+i  +k+++ + l   + ++ +l
       EPX70740.1 171 dQVNKWPFIAGCTSSILYFFARFPQIIKNYKSKSTDGLSIIFFILSML 218
                      74444445679999******************9999987766555555 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.24
  ER_lumen_recept   3 aGlSlktqilyalvfltryldlflylre.eis.lynt.....lmkialillsiyii 51 
                      +GlS+   il +l  +   l ++  ++  +++ ++ t     + ++ +i l i+i 
       EPX70740.1 206 DGLSIIFFILSMLGNTAYTLSIL-VYPAfDYTkYFRTnipwiFGAFSTIFLDIFIF 260
                      67777777776666665555552.22222222011222122222222222233332 PP

>> MtN3_slv  Sugar efflux transporter for intercellular exchange
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.9      0.39   1.4e+03      26      50 ..      41      64 ..      19     102 .. 0.59
   2 ?   -2.2   0.3       1.3   4.5e+03       3      16 ..     143     156 ..     141     163 .. 0.69
   3 ?   15.6   1.7   3.3e-06     0.012       5      51 ..     179     225 ..     178     266 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.39
    MtN3_slv 26 ikkksveelsfllflagllsallWl 50
                +k++s++ +s l  ++ l++  ++ 
  EPX70740.1 41 YKNQSSDSISPLFLIMWLVGD-IFN 64
                566777777655555444433.333 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1.3
    MtN3_slv   3 lgllcvvftvavFl 16 
                 +g++++v+ +  F 
  EPX70740.1 143 FGFMACVVLITTFI 156
                 67777777777775 PP

  == domain 3  score: 15.6 bits;  conditional E-value: 3.3e-06
    MtN3_slv   5 llcvvftvavFlsPlsilrkiikkksveelsfllflagllsallWll 51 
                 +++++++++ F++  +++ k +k ks+++ls++ f++++l+++ ++l
  EPX70740.1 179 IAGCTSSILYFFARFPQIIKNYKSKSTDGLSIIFFILSMLGNTAYTL 225
                 57899************************************998875 PP

>> COX14  Cytochrome oxidase c assembly
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.2   4.3e-05      0.15      17      44 ..     213     240 ..     212     242 .. 0.94

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 4.3e-05
       COX14  17 tVltLiGvTlyaggllvytvysygkynr 44 
                 ++l+++G T+y+   lvy + +y+ky r
  EPX70740.1 213 FILSMLGNTAYTLSILVYPAFDYTKYFR 240
                 79************************88 PP

>> DUF2157  Predicted membrane protein (DUF2157)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   5.0    0.0084        30     107     138 ..      53      83 ..       5      93 .. 0.79
   2 ?    2.4   0.0     0.034   1.2e+02      58      89 ..     134     180 ..     132     232 .. 0.60

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.0084
     DUF2157 107 gaaialvgqifqlsgdaysllllwalllllma 138
                    ++lvg+if++ g+ ++ +  + +l+l++ 
  EPX70740.1  53 FLIMWLVGDIFNIFGSIWGNVS-STVLVLAVY 83 
                 4679**************9854.444444443 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.034
     DUF2157  58 Wqglsrlvkfllllvllllslllg.avlwrdr..............r 89 
                 W++ls   +f+ ++ ++l++ ++g +++ + +               
  EPX70740.1 134 WDRLSFRGQFGFMACVVLITTFIGnVLISNASsdkpddqvnkwpfiA 180
                 99999999999888888888878845544433666666444333330 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       525  (0.0292822); expected 358.6 (0.02)
Passed bias filter:                      228  (0.0127168); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.44u 0.28s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1941.24
//
Query:       EPX70741.1  [L=245]
Description: zf-C2H2 type zinc finger protein/UBA domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.068   12.0  22.8      0.079   11.8  22.8    1.0  1  Mitofilin        Mitochondrial inner membrane protein
       0.14   11.7  17.7       0.19   11.3  17.7    1.3  1  DUF572           Family of unknown function (DUF572)
       0.19   10.8   7.5       0.21   10.6   7.5    1.3  1  DUF2252          Uncharacterized protein conserved in bacteri
       0.33    9.3   4.3       0.43    8.9   4.3    1.1  1  Herpes_pp85      Herpesvirus phosphoprotein 85 (HHV6-7 U14/HC
       0.38   11.3   7.1      0.049   14.2   2.3    1.8  2  ANXA2R           Annexin-2 receptor
        2.2    8.0   0.0        2.2    8.0   0.0    2.9  1  DUF932           Domain of unknown function (DUF932)
        3.2    4.8  15.2        3.7    4.6  15.2    1.0  1  GREB1            Gene regulated by oestrogen in breast cancer
        3.7    7.6  19.3          5    7.1  19.3    1.2  1  Asp-B-Hydro_N    Aspartyl beta-hydroxylase N-terminal region
        4.5    7.8  27.9        6.7    7.2  27.9    1.2  1  APG6_N           Apg6 coiled-coil region
        5.3    4.8  10.6        5.8    4.7  10.6    1.1  1  V_ATPase_I       V-type ATPase 116kDa subunit family
        9.7    6.7  16.0    4.7e+02    1.2  16.0    2.4  1  YABBY            YABBY protein


Domain annotation for each model (and alignments):
>> Mitofilin  Mitochondrial inner membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8  22.8   4.8e-05     0.079      56     195 ..      29     176 ..      15     228 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 4.8e-05
   Mitofilin  56 plaeklkeisklqvsavsevtkeskepkeekkkeksekqssassevaeeeaeatkkaaeakaqqpkseqekekaleevlkealskaekataaakeakde 154
                 +++e+ +ei+++++++ +++  e k+  e kkk+++  +++++++  +  +++t ++aeak     + q++ ++l++++++ l+  e+ ++ ++e +++
  EPX70741.1  29 NFEETEEEIRQRSPEEIKAALEEMKQKAEAKKKQQEVLEQEEKKKNLKILQKSTYETAEAK--RKLQDQARLRELQKMRQQKLEDQEQRKKILAEIEAD 125
                 45567799******************99999999999889999999999999999999999..889999****************************** PP

   Mitofilin 155 akkavkeavdklkeasdteeksrekardtaleaaeaaaek..........e 195
                 +k+  ++a++  k +s+te+ ++  a+++ ++a++  +++           
  EPX70741.1 126 KKRRSTTASSATKPTSSTEVPEKPPATSSSATATQSTSRAppssgrfsvrH 176
                 *********************999999999998888888766666665552 PP

>> DUF572  Family of unknown function (DUF572)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3  17.7   0.00012      0.19     102     307 ..      29     157 ..       2     206 .. 0.35

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00012
      DUF572 102 nfkaekleeeeakreekekeeeeaedamkklEkrtkdskkemealesLeeLqeln....qrqakvdfdanlelrkefreekkereeeeedeealkekis 196
                 nf++++   ee     ++++ ee + a++++ ++++ +kk++e+le+ e+ ++l+    +  ++ + ++ l+  ++ re +k r+++ ed+e  k ki 
  EPX70741.1  29 NFEETE---EE----IRQRSPEEIKAALEEMKQKAEAKKKQQEVLEQEEKKKNLKilqkSTYETAEAKRKLQDQARLRELQKMRQQKLEDQEQRK-KI- 118
                 332222...11....22233333333333333333333333332222221111110000111111222222222222222222222222222222.22. PP

      DUF572 197 lekikllpedeedekkaklle.gkteslfasseesaksakkkptkkesskekkkeslekklskltkkkadsslvvrKkkkeeekskeskekteeeskes 294
                       l e e d+k+ ++   + t+++++                                                                   ++
  EPX70741.1 119 ------LAEIEADKKRRSTTAsSATKPTSS-------------------------------------------------------------------TE 144
                 ......112121111111111111111111...................................................................11 PP

      DUF572 295 eeeskkeeetsae 307
                  +e+ +++++sa+
  EPX70741.1 145 VPEKPPATSSSAT 157
                 1111111111111 PP

>> DUF2252  Uncharacterized protein conserved in bacteria (DUF2252)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   7.5   0.00013      0.21     126     203 ..      37     114 ..      23     201 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00013
     DUF2252 126 aldewyeridvelleeatseeakgvvrkalekarkrtreklldklteleegkrrikddppkllrlseaereaieaale 203
                  +++  e+i+++l e  +++eak++ +++le+ +k+++ k+l+k t  + + +r  +d+ +l +l++  ++++e++ +
  EPX70741.1  37 IRQRSPEEIKAALEEMKQKAEAKKKQQEVLEQEEKKKNLKILQKSTYETAEAKRKLQDQARLRELQKMRQQKLEDQEQ 114
                 33444456666888999999*****************************9****************666666665433 PP

>> Herpes_pp85  Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   4.3   0.00027      0.43     424     517 ..      74     168 ..      58     174 .. 0.68

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00027
  Herpes_pp85 424 elqrlsavvieavarktGlslkrviekldraplgqesepeitegr.....dlfadvfrrpvtdaaasssassssssasPnsvslpsdrssstrtrvPa 516
                  +l+ l    +e++  k  l  +  ++ l++  + q+   e +e+r     ++ ad  rr  t + a+  +ss+ ++  P+  s  s+ ++    r P 
   EPX70741.1  74 NLKILQKSTYETAEAKRKLQDQARLRELQK--MRQQK-LEDQEQRkkilaEIEADKKRRSTTASSATKPTSSTEVPEKPPATSS-SATATQSTSRAPP 167
                  566777788999999999999999999998..33322.222333311111455888999999999999999999******9554.4444444455554 PP

  Herpes_pp85 517 s 517
                  s
   EPX70741.1 168 S 168
                  4 PP

>> ANXA2R  Annexin-2 receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   2.3     3e-05     0.049      52     136 ..       7      95 ..       2     120 .. 0.73
   2 ?   -1.7   1.4       2.1   3.5e+03      89      89 ..     139     139 ..      85     180 .. 0.56

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3e-05
      ANXA2R  52 dfgeelLssPcw.rLagvyqktdsskgvqstlePssaelaealqpgiqqkpealvgevd...laeepdrll.Lqqlplssplqpgdrqkd 136
                 d +++lLss    +++gv + +++++  +  +  +s+e  +a  ++++qk ea  ++ +   ++e+ + l+ Lq+ + +++  ++  q +
  EPX70741.1   7 D-CGKLLSSVEMaEFHGVKSGHENFEETEEEIRQRSPEEIKAALEEMKQKAEAKKKQQEvleQEEKKKNLKiLQKSTYETAEAKRKLQDQ 95 
                 4.67999987667***************************************99887651115555666665555555555555544443 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 2.1
      ANXA2R  89 l 89 
                 +
  EPX70741.1 139 P 139
                 1 PP

>> DUF932  Domain of unknown function (DUF932)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.0    0.0014       2.2      99     131 ..     168     200 ..     159     204 .. 0.87

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0014
      DUF932  99 atgevkvrHtgnvdakvieakkaLglvveefee 131
                 + g ++vrH+g+v + vi a+++L+ v++++ e
  EPX70741.1 168 SSGRFSVRHQGQVCNLVIPAEQTLRDVAQQVSE 200
                 56799*******************999998765 PP

>> GREB1  Gene regulated by oestrogen in breast cancer
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6  15.2    0.0022       3.7    1134    1260 ..      32     160 ..       8     197 .. 0.43

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.0022
       GREB1 1134 daaeessktspvkveks..eskdavesglsskasakselseasaaaasaseeakspkasvtseeeeseeskekekeslsketesqlsleaseqkeal 1228
                  +++ee  ++sp +++ +  e+k+++e +++ ++  ++e ++++ +  ++s+ ++ + +   +++   +e ++ ++++l+++++++  l + e++++ 
  EPX70741.1   32 ETEEEIRQRSPEEIKAAleEMKQKAEAKKKQQEVLEQEEKKKNLKILQKSTYETAEAKRKLQDQARLRELQKMRQQKLEDQEQRKKILAEIEADKKR 128 
                  2223333333333322200111122221222221111111111111111111112222222333333344444444444444444444444555555 PP

       GREB1 1229 dakasskssssssssssassPssscslakavk 1260
                   ++++s+ ++++ss+   ++P  ++s+a a++
  EPX70741.1  129 RSTTASSATKPTSSTEVPEKPPATSSSATATQ 160 
                  55555555555555555555543333333332 PP

>> Asp-B-Hydro_N  Aspartyl beta-hydroxylase N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1  19.3     0.003         5      91     194 ..      31     135 ..      10     205 .. 0.56

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.003
  Asp-B-Hydro_N  91 qlaeekekqkveeevkEqlkkvkeeivvkeeeeegieeepqleeekkllkedsderqeeleagkvkeevE.eslkveetvseeakkdmkekaseee 185
                    + +ee+ +q+  ee+k  l+++k+++++k++++e+ e+e+++++ k l k++ +++ ++ + + + +  E ++++  +  ++e++k++  + + ++
     EPX70741.1  31 EETEEEIRQRSPEEIKAALEEMKQKAEAKKKQQEVLEQEEKKKNLKILQKSTYETAEAKRKLQDQARLRElQKMRQQKLEDQEQRKKILAEIEADK 126
                    233455666666777777777777777777777777777777776666666666555544444444333312222222222333222222222222 PP

  Asp-B-Hydro_N 186 nekskepve 194
                    +  s  +  
     EPX70741.1 127 KRRSTTASS 135
                    222222211 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2  27.9    0.0041       6.7       3     131 ..       5     127 ..       4     129 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0041
      APG6_N   3 CeeCtdlLleeldkqleqaekerdaYeeflkklkkekkeeekqdeeleeleeeleklekeeeelleeLkelekereeleaelaaleeelealeeeeerf 101
                 C +C +lL +    +++ +++ ++++ee +++++++++e      e++++ ee+++  +++++ +e L++ ek++     + +++e  +++++ + ++ 
  EPX70741.1   5 CSDCGKLLSSVEMAEFHGVKSGHENFEETEEEIRQRSPE------EIKAALEEMKQKAEAKKKQQEVLEQEEKKKNLKILQKSTYETAEAKRKLQDQAR 97 
                 ************************************666......788888888886555555555555555555555567778888888999999999 PP

      APG6_N 102 wreynelqlelleleeeldsleaqyehaqn 131
                 +re ++ + ++le +e+++++ a++e +++
  EPX70741.1  98 LRELQKMRQQKLEDQEQRKKILAEIEADKK 127
                 *********************999998875 PP

>> V_ATPase_I  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7  10.6    0.0036       5.8      62     164 ..      33     121 ..       6     195 .. 0.43

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.0036
  V_ATPase_I  62 sleapeekeldeleeelekleee.........lkelnenleklkkelnelvelkavlekakefleeeeeeeeeeeseeeeeekeeeeeeeseeeeeeel 151
                 ++e+ ++++ +e+++ le+++++         + e++e++++lk  +++  e+ +  +k ++                        + +e ++ ++++ 
  EPX70741.1  33 TEEEIRQRSPEEIKAALEEMKQKaeakkkqqeVLEQEEKKKNLKILQKSTYETAEAKRKLQDQA----------------------RLRELQKMRQQK- 108
                 2222222222222222222222200000000022222222222221111111111111111111......................111111111111. PP

  V_ATPase_I 152 leeeeelsfvaGv 164
                 le++e+ + +   
  EPX70741.1 109 LEDQEQRKKILAE 121
                 1111111112111 PP

>> YABBY  YABBY protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2  16.0      0.29   4.7e+02      32     105 ..       2      76 ..       1     212 [. 0.69

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.29
       YABBY  32 tvrCGhCtnlls.vnlrallla.paaaelqslkkqlel..................................ksellskelassskssekskksalass 94 
                 t++C  C +lls v++++++ + + ++++++++++ ++                                  +                          
  EPX70741.1   2 TLKCSDCGKLLSsVEMAEFHGVkSGHENFEETEEEIRQrspeeikaaleemkqkaeakkkqqevleqeekkkN-------------------------- 74 
                 89******998659**999987444455555554444444554444443333333222222111111111110.......................... PP

       YABBY  95 sseqeeeeeek 105
                           k
  EPX70741.1  75 ---------LK 76 
                 .........11 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      4488  (0.250321); expected 358.6 (0.02)
Passed bias filter:                     1100  (0.0613531); expected 358.6 (0.02)
Passed Vit filter:                       209  (0.0116571); expected 17.9 (0.001)
Passed Fwd filter:                        41  (0.0022868); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.84u 0.36s 00:00:01.20 Elapsed: 00:00:00.51
# Mc/sec: 1449.18
//
Query:       EPX70742.1  [L=297]
Description: MSP domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.7e-24   84.7   0.0    6.2e-24   83.9   0.0    1.4  1  Motile_Sperm  MSP (Major sperm protein) domain
  ------ inclusion threshold ------
          1    8.5  10.2        1.2    8.2  10.2    1.2  1  SOG2          RAM signalling pathway protein


Domain annotation for each model (and alignments):
>> Motile_Sperm  MSP (Major sperm protein) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.9   0.0   6.9e-28   6.2e-24       4     107 ..       3     106 ..       1     108 [. 0.91

  Alignments for each domain:
  == domain 1  score: 83.9 bits;  conditional E-value: 6.9e-28
                   EESSSEEEEESSTSSHEEEEEEEEE-SSSSEEEEEEES-TTTEEEESSEEEETTTCEEEEEEEEESSSSSTTSTC..CEEEEEEEEES-TT-STHHH CS
  Motile_Sperm   4 idPsdllvfaaelnkqgtsklklkNtskkrvaFkvkttapkkyrvrPnvGiikpgesveitvtlkpldeepsekk..kdkfviqylevpgdekdeke 98 
                   ++ +  ++f+ +l++ ++   +l N+s+ ++ Fkvkttapk+y+vrPn G i+p++s+ i+v+l+pld+ep+++   +dkf++q+++   + + e  
    EPX70742.1   3 VECKNSIFFPRPLTQLVKRDFQLFNPSNVPIGFKVKTTAPKQYCVRPNGGRIEPQSSTSIQVILQPLDHEPAPNAkcRDKFLVQSAQL--RPELEGV 97 
                   667789*******999******************************************************9887678**********9..6666677 PP

                   HHHHHHHHC CS
  Motile_Sperm  99 afkeawkkg 107
                   + +e+w+++
    EPX70742.1  98 DISEIWNQV 106
                   888888775 PP

>> SOG2  RAM signalling pathway protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2  10.2   0.00014       1.2     212     353 ..     130     278 ..      31     289 .. 0.47

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00014
        SOG2 212 tRhagsfsaqdveqGaalt...plrsdqipfnl.........srsrrssssgnsaspaangaqsetsersasssg...vqssasstPlgegstsppgal 295
                 +Rh+ s s    +   a++   p        ++           s ++ s+++++s  a g ++++++ +  ++    + ++ ++t l+++++   + +
  EPX70742.1 130 HRHKNSLSNSAGNAAFASQnpnP-------APGrqaqpsgnvPPSVAQPSQTPRSSVDAPGLSTTAPKAAPPTKLgepLATTTNTTFLNTSAP---APA 218
                 25554444222222222222111.......111111111111111111111111111111111111111111111011111122222222222...234 PP

        SOG2 296 srqslsttgststltsssksrsssrsnt..nasastprslattpappasaesfastlt.as 353
                 +++++ +++ +s + +s+ + +ss+s++  n+   t +s +t  +p+a a+ + ++ + ++
  EPX70742.1 219 PASNPINPRFQSAVAMSPTEPKSSTSTHfgNTPLPTTKSTSTFGRPTAGAKVV-PQIHnTV 278
                 44444555555555555555555555555555555555555555544443332.2222233 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (297 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       576  (0.0321267); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 2076.02
//
Query:       EPX70743.1  [L=265]
Description: tethering factor for nuclear proteasome Cut8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.8e-48  163.9   0.6    6.2e-48  163.5   0.6    1.1  1  Cut8      Cut8, nuclear proteasome tether protein


Domain annotation for each model (and alignments):
>> Cut8  Cut8, nuclear proteasome tether protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.5   0.6   3.5e-52   6.2e-48      34     239 ..      16     215 ..       2     217 .. 0.90

  Alignments for each domain:
  == domain 1  score: 163.5 bits;  conditional E-value: 3.5e-52
        Cut8  34 ssssk.krsrtpkisgqpLplsrlLetLdkeqLqsllqslveehpeleqevskkapkpsiesllelLkekkenilkslPykgdkeddyaYlRvkphLle 131
                 s+++  k++r p   g  Lpl+rl +  +k+qL+sll + ve+hp+l   +++k+p ps+e ++ +++++ e +++s+Py+gdk+ +ya++R+++  ++
  EPX70743.1  16 SDEPIvKKAR-PLPVGNHLPLPRLFQYTEKQQLVSLLLQCVEKHPDLGRNIREKLPVPSLETCIGTMQKLSETLHSSFPYGGDKRGEYAFNRIREKYMA 113
                 2233345555.7799************************************************************************************ PP

        Cut8 132 FlncLsDfilnflppnetnlstsLkfldeatklvhkLPnfdnqshnyykdkcyeqlsnawltvikeaakdgggllkkleleeweekLkkhneesegklq 230
                  l +L D ++ +lpp+ t  ++ + fld at++vh+LP+f+n+ hn yk+++y +l+ awl v+k+ +++       +  +  +e+L++hn++s+++lq
  EPX70743.1 114 VLHALNDLVPCYLPPHSTCFEHNFAFLDAATNVVHQLPEFHNPNHNVYKSQAYYELTGAWLVVLKQLEER------PILPLLPIEELEEHNQKSQNRLQ 206
                 *****************************************************************85555......4445556889************* PP

        Cut8 231 kvlellksk 239
                 +++ +lk++
  EPX70743.1 207 EAVVYLKEL 215
                 *****9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (265 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       801  (0.0446762); expected 358.6 (0.02)
Passed bias filter:                      664  (0.037035); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 1833.20
//
Query:       EPX70744.1  [L=228]
Description: Pex19 protein family [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.1e-23   82.8   7.5      4e-23   82.5   7.5    1.0  1  Pex19     Pex19 protein family
  ------ inclusion threshold ------
      0.088   12.6   3.4        1.4    8.8   0.1    2.1  2  DUF724    Protein of unknown function (DUF724)
        2.6    7.6  10.7        9.4    5.8  10.7    1.7  1  GET2      GET complex subunit GET2
        4.6    5.7   8.0        1.1    7.8   0.8    2.0  2  FapA      Flagellar Assembly Protein A


Domain annotation for each model (and alignments):
>> Pex19  Pex19 protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.5   7.5   8.9e-27     4e-23      29     222 ..      20     217 ..       6     226 .. 0.72

  Alignments for each domain:
  == domain 1  score: 82.5 bits;  conditional E-value: 8.9e-27
       Pex19  29 aeedfeellkqlee.......aaeaaaeaksaeasssaaes....kaeeesfqdiikkTlerLkesgdkvdaaa...eseeknsdd.llaqlLkqLeag 112
                 + ++ +++l++l+         +e++ ++k++++++    s    k+++++ +  i++ +++   sg+   ++    +s   n+dd l+++++ + + +
  EPX70744.1  20 EMNELDDILDELDLppkidrrEQEKQGNTKDDDKKE----SiddlKKSDNNLDTLIEDMVNKFHGSGNPDASEKeklASMGLNNDDaLFQSIFGNSNPT 114
                 444444555555446664432222222222222222....245679999***************99986554444674445455550556666666555 PP

       Pex19 113 advegeggeeg..edlekmllgmmeqLssKevLyePlkelnekfpewLeenkeklsaedlerYekQaeivkeIvakFekedysdedkekreeilellqe 209
                 +d+++ ++     + le++l ++m+q +sKe+LyePlk+l+ +++++L+++k    + + e+Y++Q++ +++ +a+Fe+ dy+ +  ++  e+++l++e
  EPX70744.1 115 GDASNTED--InyDALENALNSLMSQVTSKEILYEPLKDLEANYTKFLQDEK----NAKDETYKNQYAKIQRCIAIFENSDYQVQ--RDSPEVAKLVEE 205
                 44444444..246************************************554....556689*********************99..************ PP

       Pex19 210 lqelGspPkeLvg 222
                 +qe   pP +L++
  EPX70744.1 206 IQEDPLPP-SLMN 217
                 ***99998.5554 PP

>> DUF724  Protein of unknown function (DUF724)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.1    0.0003       1.4     125     182 ..      21      79 ..      13      82 .. 0.70
   2 ?    4.4   0.7    0.0066        30      89     150 ..     127     193 ..     122     209 .. 0.70

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0003
      DUF724 125 krkleeeidelek..kilelerqlallkekkeaadkeiarlkseaekleeeledveqeFe 182
                 +++l++ +del+   ki + e q+++  +k ++++++i +lk++ ++l++ +ed+ ++F+
  EPX70744.1  21 MNELDDILDELDLppKIDRRE-QEKQGNTKDDDKKESIDDLKKSDNNLDTLIEDMVNKFH 79 
                 444444444444211444443.44456689999************************997 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.0066
      DUF724  89 alqsrlnkLlslkdeqtklleerkklekkie.....eeesekrkleeeidelekkilelerqlallk 150
                 al++ ln L+s  ++++ l e +k+le + +     e++++++ ++++ +++++ i+ +e+ + +++
  EPX70744.1 127 ALENALNSLMSQVTSKEILYEPLKDLEANYTkflqdEKNAKDETYKNQYAKIQRCIAIFENSDYQVQ 193
                 6788999999999999999999999999886222224555666667777777777777776665554 PP

>> GET2  GET complex subunit GET2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8  10.7    0.0021       9.4      50     183 ..      41     176 ..      17     220 .. 0.48

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0021
        GET2  50 aaekttpasttasssssas.ehddpeiediseiavkpkktasskkksplseesepeapqldqllkqllqqqqqgnsensqdaesstPdlfsqllkmmkq 147
                 ++ek+ ++++  +++s ++ +++d +++   e +v++ + + ++ +s++++ ++   ++ d+l+++++++++ +++ +++++ +   d +++ l+++++
  EPX70744.1  41 EQEKQGNTKDDDKKESIDDlKKSDNNLDTLIEDMVNKFHGSGNPDASEKEKLASMGLNNDDALFQSIFGNSNPTGDASNTEDIN--YDALENALNSLMS 137
                 222222222222222222244445444444444444444434443333333333333355789999999855555444443333..3666666666666 PP

        GET2 148 gegg..........sakseeetssspeeaeyqqqlleyhkyqvkkl 183
                 + ++                  +++  +  ++++ ++ ++y+++  
  EPX70744.1 138 QVTSkeilyeplkdL-------EANYTKFLQDEKNAKDETYKNQYA 176
                 665533333333320.......333333333333333333333322 PP

>> FapA  Flagellar Assembly Protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.8   0.00025       1.1     344     402 ..      19      79 ..      12      94 .. 0.78
   2 ?    2.0   1.2     0.014        62     341     392 ..     134     187 ..     112     209 .. 0.60

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.00025
        FapA 344 eeleeleeeleklkkk..ikklpklkaekqlesekkeqlkklletkeklkeeleeleeelk 402
                 ee++el + l++l+    i++ +++k+ +  + +kke+++ l+++ ++l + +e++ ++++
  EPX70744.1  19 EEMNELDDILDELDLPpkIDRREQEKQGNTKDDDKKESIDDLKKSDNNLDTLIEDMVNKFH 79 
                 3344444444444433669999999999999***********************9998876 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.014
        FapA 341 eleeeleel...eeeleklkkkikklpklkaekqlesekkeqlkklletkeklke 392
                  l  ++ +     e l++l+++++k+ +  ++++ +++ k+q++k++++   +++
  EPX70744.1 134 SLMSQVTSKeilYEPLKDLEANYTKFLQ-DEKNAKDETYKNQYAKIQRCIAIFEN 187
                 3333322224447777778888777777.66777788888888888777644444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1364  (0.0760779); expected 358.6 (0.02)
Passed bias filter:                      560  (0.0312343); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 1566.75
//
Query:       EPX70745.1  [L=118]
Description: hypothetical protein SOCG_04212 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0061   16.3   0.7     0.0082   15.9   0.7    1.3  1  Sclerostin  Sclerostin (SOST)
  ------ inclusion threshold ------
       0.17   11.7   2.5       0.18   11.5   2.5    1.1  1  MAJIN       Membrane-anchored junction protein


Domain annotation for each model (and alignments):
>> Sclerostin  Sclerostin (SOST)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.7   9.2e-07    0.0082     114     170 ..      32      87 ..      15     100 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 9.2e-07
                 S-SS------EEEEEEEEEEEEB-TTSSSEEEEEEEEEEEE---XXXXXXXXXXXXX CS
  Sclerostin 114 srrssqefrcvndktrtqriqlqcedGatrtykvtvvtsckckrytrqhnesshkde 170
                  r + + +rc  d trtq  +lq     ++  k +   s +  r+  q+ + +h+++
  EPX70745.1  32 ARAQRDAWRCFRDMTRTQNEKLQTTRRESKWNKQR-GGSVEMNRFIDQNTQQEHEKQ 87 
                 6888899****************998888887765.578999999999999999876 PP

>> MAJIN  Membrane-anchored junction protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   2.5   2.1e-05      0.18     140     214 ..      18      89 ..       6     113 .. 0.66

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 2.1e-05
       MAJIN 140 kkrkkveepssPsragldrakletsseaaskkkplketrrnreeksqqekqeteasdatdvqeqdskledslaGk 214
                  ++k+ + + sP++a+ +r+  +  ++++++++ + +t+r +++ ++   q+  + +++   +q++++e++ + +
  EPX70745.1  18 VNNKHNQIRISPQKARAQRDAWRCFRDMTRTQNEKLQTTRRESKWNK---QRGGSVEMNRFIDQNTQQEHEKQLE 89 
                 378999999**************999999999888888885444444...4444444445555555555554433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1541  (0.0859501); expected 358.6 (0.02)
Passed bias filter:                      507  (0.0282782); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.28s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 737.04
//
Query:       EPX70746.1  [L=522]
Description: spermine family transmembrane transporter Caf5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.5e-29  101.8  36.6    3.5e-29  101.8  36.6    1.9  2  MFS_1     Major Facilitator Superfamily
  ------ inclusion threshold ------
      0.049   12.1   0.2      0.049   12.1   0.2    2.2  3  TRI12     Fungal trichothecene efflux pump (TRI12)
      0.091   11.9   0.2       0.13   11.4   0.2    1.1  1  PAC1      Proteasome assembly chaperone 4
        1.8    9.1   7.4        4.4    7.8   0.0    4.1  4  DUF202    Domain of unknown function (DUF202)


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.8  36.6   7.9e-33   3.5e-29       1     351 [.      78     465 ..      78     467 .. 0.78
   2 ?    1.6   1.1     0.023     1e+02      11      50 ..     461     500 ..     451     505 .. 0.73

  Alignments for each domain:
  == domain 1  score: 101.8 bits;  conditional E-value: 7.9e-33
       MFS_1   1 lllaaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdr..fGrrrvlllglllfalglllll.fasslwlllvlrvlqG 96 
                 ++l++f ++++++i++p     +++  ++    i l lt++  g+av+ l++++ls+   +Gr r++l +ll+f+    +++ ++++l +ll +r+++G
  EPX70746.1  78 ICLLTFSVYIGSAIFTPGEF-EMMQVMHVGQVPITLGLTMFVCGYAVGPLLFSPLSELpqVGRLRIYLGTLLVFICL-QIPTaLGNGLGVLLPMRFFAG 174
                 57999**************9.899****99999************************6659*******999999999.77773558988********** PP

       MFS_1  97 lgagalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpeepperkrkspkeee....... 188
                 ++++ ++++g+a +ad++ +   +  i  +s+g+ +G++lgpllg++++ +  Wr+ f++l i+++++f++ ll+++ e +e+     + ++       
  EPX70746.1 175 FFGSPALATGGATLADIWQPWLLPYFICTWSIGAVAGPVLGPLLGAAMVVAKDWRWQFWFLMILCAFSFLF-LLFFMPETSESYFLYRRAKKlredrnd 272
                 ********************************************************************995.455544444444444444446776666 PP

       MFS_1 189 ..........kgtgpaplvp.......awkallkdpvl..w..illialllfffgfsg...lltllplylqevlgls....glllaglllallalvgai 259
                           +                a++ l+++ +l     i+l   +++++++++    +  +p+ +qev++++    gl ++g++++++ ++++ 
  EPX70746.1 273 pryttegeisN--------RettlsrlALETLWRPVQLsiAepIVLSLNVYIGLIYAIlylWFEAFPITFQEVYHFTlvelGLTYMGFMVGVFIALVFY 363
                 66666555532........022233446888888887754144344444444444444111666666658*******9999888888666666666544 PP

       MFS_1 260 lallagrls.dr.......lgrrrrlllallllllaalglallavtssavllll....vlvliGf.glgfvfpsllalasdlappeeagtasglfntag 345
                  +l + +++  +       l+++  l + +++++++ ++l+++++ts a+++++    + v++++ ++ ++++++++la+ +   ++ +++++ + +++
  EPX70746.1 364 -CLALYKFAmPKykatngkLPPEELLKFDFPATVCFPICLFWFGWTSRASVHWMapiaSTVFYSIgAFVMFQSTFQYLAACYP--NHVASIFAGNDLFR 459
                 .555555554777777788888************************9999999987777777999777777888888887777..88888888777777 PP

       MFS_1 346 slggal 351
                 s ++a 
  EPX70746.1 460 SGMAAA 465
                 766655 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.023
       MFS_1  11 arsilgpalplalaedlgispseigllltlyalgaavasl 50 
                 ++++++p++  a+ ++ g s + +g+ +t+ ++ ++++++
  EPX70746.1 461 GMAAAFPLFARAMFHNTGPSYAPVGWGCTILGVISCIMIP 500
                 4555666666677777788888888888888888888777 PP

>> TRI12  Fungal trichothecene efflux pump (TRI12)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1     0.051   2.3e+02     236     290 ..      99     153 ..      95     177 .. 0.76
   2 ?   12.1   0.2   1.1e-05     0.049     170     220 ..     203     252 ..     197     272 .. 0.77
   3 ?   -3.2   0.0      0.47   2.1e+03     519     548 ..     468     497 ..     457     499 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.051
       TRI12 236 lakldwigiilvivgvslfllgvswggkpnspwnsakviglissglgslvvfaly 290
                 + ++  +g + ++ g ++f+ g + g    sp      +g +   lg+l+vf   
  EPX70746.1  99 MMQVMHVGQVPITLGLTMFVCGYAVGPLLFSPLSELPQVGRLRIYLGTLLVFICL 153
                 5667778888888888888888888888888888888888888888888888654 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 1.1e-05
       TRI12 170 ivsipvvvtsglspylgqrlaiqgswrwifyiyiitsaiavllivvwyypp 220
                 + si +v+   l+p lg  + +  +wrw f+  +i+ a + l+++ +  p 
  EPX70746.1 203 TWSIGAVAGPVLGPLLGAAMVVAKDWRWQFWFLMILCAFSFLFLLFF-MPE 252
                 56889999999**************************9998766544.443 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 0.47
       TRI12 519 vvsramadsytasyanvyyfamalgvipii 548
                 + +ram      sya v + +  lgvi  i
  EPX70746.1 468 LFARAMFHNTGPSYAPVGWGCTILGVISCI 497
                 567999999999*****9999999999876 PP

>> PAC1  Proteasome assembly chaperone 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.2   2.9e-05      0.13       3      57 ..       7      62 ..       5      78 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 2.9e-05
        PAC1  3 tffGevl.svlsRAvdedeeeelee.eneedeeirreleekrevkvkwnpekselee 57
                tffG+++ s  sR  d+ +e+el++ e+++  + ++e  + + + v wn ek + e+
  EPX70746.1  7 TFFGDIIcSLNSRKKDNKDEDELTKvESQNTARNKEEDTDEKDIIVSWNGEK-DPEN 62
                9****873788******99999986444444444445555678999999884.4444 PP

>> DUF202  Domain of unknown function (DUF202)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.3      0.29   1.3e+03      42      56 ..     233     247 ..     178     265 .. 0.53
   2 ?    0.0   0.2      0.27   1.2e+03      18      33 ..     236     275 ..     232     330 .. 0.52
   3 ?    7.8   0.0   0.00097       4.4      18      63 ..     358     440 ..     350     442 .. 0.80
   4 ?    1.5   0.2     0.092   4.1e+02      25      56 ..     468     497 ..     458     504 .. 0.67

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.29
      DUF202  42 ilglilivlgiltll 56 
                 ++ +il ++++l+ll
  EPX70746.1 233 WFLMILCAFSFLFLL 247
                 333444444444444 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.27
      DUF202  18 lalialglallrffl........................t 33 
                 + l a+++++l ff                          
  EPX70746.1 236 MILCAFSFLFLLFFMpetsesyflyrrakklredrndprY 275
                 5677777777777775555555555555444444444440 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.00097
      DUF202  18 lalialglallrffl.....................................tgepsalgkilglilivlgiltllvglvryl 63 
                 +al++  lal++f                                       + ++ +++ i+++++  +g+++++ ++++yl
  EPX70746.1 358 IALVFYCLALYKFAMpkykatngklppeellkfdfpatvcfpiclfwfgwtsRASVHWMAPIASTVFYSIGAFVMFQSTFQYL 440
                 667777777777666777777777777777777777777777777777777788888899*********************97 PP

  == domain 4  score: 1.5 bits;  conditional E-value: 0.092
      DUF202  25 lallrffltgepsalgkilglilivlgiltll 56 
                 l+  + f+  +ps   +++g+++ +lg+++ +
  EPX70746.1 468 LFARAMFHNTGPSY--APVGWGCTILGVISCI 497
                 33333344555555..99*********99765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (522 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1247  (0.0695521); expected 358.6 (0.02)
Passed bias filter:                      729  (0.0406604); expected 358.6 (0.02)
Passed Vit filter:                        69  (0.00384851); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.69u 0.32s 00:00:01.01 Elapsed: 00:00:00.46
# Mc/sec: 3377.73
//
Query:       EPX70747.1  [L=1092]
Description: hypothetical protein SOCG_04210 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-11   43.3   0.0    1.3e-05   24.9   0.0    3.6  3  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.7   0.0    0.0015        27       3      58 ..     219     269 ..     217     270 .. 0.94
   2 !    9.6   0.0   4.5e-05      0.81       1      60 [.     844     897 ..     844     909 .. 0.85
   3 !   24.9   0.0   7.3e-10   1.3e-05       4      68 ..     938     997 ..     936     999 .. 0.92

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.0015
                 EESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHH CS
       RRM_1   3 VgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlea 58 
                 +++Lp+d +e  L ++    G+ + i+++++     +   ++ + s edA +++++
  EPX70747.1 219 ISGLPSDFNEAPLIQYVCSLGKAELISVCTQ-----THSIYIHYLSIEDALNCINS 269
                 899***************************7.....999************99975 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 4.5e-05
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHT CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealn 60 
                 lf++++++++++ e+  l+++f    +++  ++     k+++fV+F  + dA+  l+a  
  EPX70747.1 844 LFLSGFHRTTKQFEIGNLLKGFPLE-EVRFLSK-----KKICFVTFLESYDAKLFLDAHE 897
                 7899999999999999999999877.9999997.....**************99998644 PP

  == domain 3  score: 24.9 bits;  conditional E-value: 7.3e-10
                 ESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEE CS
       RRM_1   4 gnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggre 68 
                 +n++p+vt+++L  l++ +Gp++s+  ++     +k+++ ++++s  +  kA+++l+     +++
  EPX70747.1 938 ENIHPSVTRSDLISLLKIYGPVESFHFSK-----PKNVGLITYNSIYSTIKAMKHLQSHPTLKKT 997
                 599*************************9.....8*********************987666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1092 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       776  (0.0432818); expected 358.6 (0.02)
Passed bias filter:                      217  (0.0121033); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.71u 0.27s 00:00:00.98 Elapsed: 00:00:00.45
# Mc/sec: 7331.29
//
Query:       EPX70748.1  [L=216]
Description: CIA30 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-41  142.3   0.3    1.6e-41  142.0   0.3    1.1  1  CIA30     Complex I intermediate-associated protein 30 (CIA30
  ------ inclusion threshold ------
      0.027   14.9   0.0       0.05   14.0   0.0    1.4  1  AFT       Transcription factor AFT


Domain annotation for each model (and alignments):
>> CIA30  Complex I intermediate-associated protein 30 (CIA30)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.0   0.3   1.7e-45   1.6e-41       3     159 ..       5     176 ..       3     177 .. 0.95

  Alignments for each domain:
  == domain 1  score: 142.0 bits;  conditional E-value: 1.7e-45
       CIA30   3 Fkspe..sldkwtllsDrvmGGvStaslklskk...dktalFsGnlstelinrgGFasvrtkkrkrkldlssyegleLrvk.GDgrkYklnlktesk.. 93 
                 F +pe  + +++++++Drv+GG St++l+ +k    d++a+F G+l+t++++++GFas+ t+  +rk++l+++eg+e+++  +D+ kY++++k++++  
  EPX70748.1   5 FGQPEnwHEQDFRAVDDRVRGGQSTSHLTAEKGngsDSYARFWGTLDTKTLGGAGFASQATNIPNRKWNLREFEGIEINIAkSDNFKYTFIIKDDHQtk 103
                 77887668899*******************8767777*******************************************88*************999* PP

       CIA30  94 ...eqsglsyqadfetk.kgewetvkipfsdfvptfrGrvvedqeeldlskiksigllls...dkqegpfeLe 159
                    e+s+lsy++df    ++e +++ +pfsdf+pt+rGr+ve +++ld+s+i +++++++   d+q+g+feL 
  EPX70748.1 104 nddERSTLSYEYDFSPSfSKEDQSIYVPFSDFRPTYRGRPVEGAPPLDTSEIVQFSFMIRsffDSQSGDFELL 176
                 ***************997888***************************************9*9********96 PP

>> AFT  Transcription factor AFT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   5.6e-06      0.05      17      50 ..      77     110 ..      66     139 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 5.6e-06
                 GGT--EEEEEEETTEEEEEE---XXXXXXXX... CS
         AFT  17 pqGieiviersDslkivfkCkaakkkrkaseksk 50 
                  +Giei i++sD++k +f  k ++++++  e+s+
  EPX70748.1  77 FEGIEINIAKSDNFKYTFIIKDDHQTKNDDERST 110
                 57*********************99999887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       313  (0.0174578); expected 358.6 (0.02)
Passed bias filter:                      230  (0.0128284); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1640.80
//
Query:       EPX70749.1  [L=234]
Description: vacuolar sorting protein Vps24 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.6e-16   58.9  20.0    4.8e-16   58.8  19.4    1.3  1  Snf7      Snf7


Domain annotation for each model (and alignments):
>> Snf7  Snf7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.8  19.4   2.7e-20   4.8e-16       2     160 ..      20     188 ..      19     210 .. 0.83

  Alignments for each domain:
  == domain 1  score: 58.8 bits;  conditional E-value: 2.7e-20
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
        Snf7   2 airsLrkaerkldkkqeslekkikkleaelkklakkgnkdralllLKqkkryekqldqldnqlanleqvslaienlksnkevlnamkqgakamkamnkk 100
                 ++  Lrk++r++d++   l++  kk e ++k lak+ +    ++l+K++ r+++ +++l +++a l + s+++ +++++ ++ +amk+++++m+++++ 
  EPX70749.1  20 WQATLRKEQRNIDRQVVYLQNGKKKAETQMKALAKQRDISNMRVLAKELARTNRHRKKLAESKAMLGSLSMQLNEQMAMYKIEKAMKSSTSVMQSVSSL 118
                 7889*********************************************************************************************** PP

                 TCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTT-....GGTTHHHHHHHHHHHHHHHHHCSH........H CS
        Snf7 101 vdidkidklmdeiedqmekaeeisEalsrsldda....deedEeeleaeLdaLeqelgdeell.......d 160
                 v+++++ ++m+ ++ ++ ka++ +E+ ++ + ++      ed e+ ++e+ +++++ +  +++       +
  EPX70749.1 119 VRLPELSQTMRSLSMELTKAGIMEEMRDEMI-FPvedeGFEDLEDEDEEVKEILSQFQPTITKpsapvskE 188
                 ***********************99977666.544432223335556666666666555554344445550 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (234 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1972  (0.109989); expected 358.6 (0.02)
Passed bias filter:                      494  (0.0275531); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.28s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 1628.16
//
Query:       EPX70750.1  [L=189]
Description: p23 Wos2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00014   22.8   0.2    0.00026   21.9   0.2    1.4  1  CS        CS domain


Domain annotation for each model (and alignments):
>> CS  CS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.2   1.5e-08   0.00026      10      76 .]      23      88 ..      18      88 .. 0.80

  Alignments for each domain:
  == domain 1  score: 21.9 bits;  conditional E-value: 1.5e-08
                TEEEEEEE-TTCTTTTTCEEEEEETTEEEEEE..TS..CEEEEECEBSS-BETTTEEEEEETTEEEEEEEB CS
          CS 10 deVvvtiyvkkvnikkkdvkvefkerslkvki..gk..eklliegeLfgpIdpeesswtieskkveitLkK 76
                + V++t+ ++++     + k+++++++l +    g   ++ + + ++f++Id+e+s+++++++++ ++L K
  EPX70750.1 23 NVVYLTVVIPDA----VEPKINLTSEKLVIDSksGAaaHYAV-QIDFFKEIDTEKSKYSLTGRNIFFVLFK 88
                678899999987....78888899999888887744444454.555*******************999966 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       534  (0.0297841); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 1363.16
//
Query:       EPX70751.1  [L=1430]
Description: ATP-binding cassette transporter abc1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      1e-52  178.3   0.0    2.7e-29  102.5   0.2    2.4  2  ABC_tran         ABC transporter
    1.3e-39  136.6  31.1    8.9e-20   71.5  15.7    2.5  2  ABC_membrane     ABC transporter transmembrane region
    3.7e-15   56.0   0.3    0.00013   21.5   0.1    4.5  3  SMC_N            RecF/RecN/SMC N terminal domain
    9.9e-08   31.6   0.3     0.0046   16.7   0.0    2.5  2  AAA_29           P-loop containing region of AAA domain
    1.3e-06   27.7   0.0      0.021   13.9   0.0    2.3  2  T2SSE            Type II/IV secretion system protein
    1.8e-06   28.2   3.7     0.0088   16.2   0.2    2.7  2  DUF87            Helicase HerA, central domain
      4e-06   27.5   0.3     0.0039   17.7   0.0    2.6  2  AAA_23           AAA domain
    1.4e-05   25.4   0.5        0.3   11.3   0.0    3.3  2  AAA_22           AAA domain
      2e-05   24.6   0.1      0.028   14.3   0.0    2.7  2  RsgA_GTPase      RsgA GTPase
    6.6e-05   23.0   0.1       0.82    9.8   0.1    3.4  3  MMR_HSR1         50S ribosome-binding GTPase
    7.2e-05   22.5   0.1       0.15   11.6   0.0    2.5  2  AAA_25           AAA domain
    0.00011   22.7   0.1      0.066   13.6   0.0    2.5  2  AAA_16           AAA ATPase domain
    0.00015   21.3   0.1       0.39   10.0   0.0    2.3  2  FtsK_SpoIIIE     FtsK/SpoIIIE family
    0.00026   20.8   0.0      0.019   14.7   0.0    2.5  2  Viral_helicase1  Viral (Superfamily 1) RNA helicase
    0.00057   19.8   4.0        4.9    6.9   0.7    4.4  4  AAA_21           AAA domain, putative AbiEii toxin, Type IV T
     0.0015   18.3   0.4          1    9.1   0.0    3.1  3  IstB_IS21        IstB-like ATP binding protein
     0.0055   16.0   0.0        2.4    7.4   0.0    2.9  2  Zeta_toxin       Zeta toxin
     0.0059   15.8   1.0        2.4    7.3   0.1    3.1  2  NB-ARC           NB-ARC domain
     0.0077   15.8   0.2        5.6    6.4   0.1    2.8  2  AAA_7            P-loop containing dynein motor region
  ------ inclusion threshold ------
      0.012   14.9   2.0        2.4    7.4   0.0    2.7  3  AIG1             AIG1 family
      0.015   15.8   0.5        2.3    8.7   0.0    3.2  2  AAA              ATPase family associated with various cellul
      0.019   15.1   0.5        2.4    8.3   0.0    2.8  2  AAA_33           AAA domain
      0.019   14.7   0.0        3.3    7.4   0.0    2.4  2  Sigma54_activat  Sigma-54 interaction domain
      0.026   14.6   0.6          1    9.4   0.1    2.6  2  Dynamin_N        Dynamin family
      0.031   14.2   0.9        1.7    8.6   0.1    2.7  2  NACHT            NACHT domain
       0.05   12.9   0.4        1.5    8.1   0.0    2.5  2  ATPase           KaiC
      0.069   12.8   0.2         11    5.5   0.1    2.3  2  AAA_15           AAA ATPase domain
       0.07   13.7   0.1        6.1    7.4   0.0    2.7  2  AAA_18           AAA domain
      0.077   12.6   0.0       0.21   11.2   0.0    1.6  1  AAA_27           AAA domain
       0.11   12.5   0.4        4.6    7.2   0.0    2.9  3  ResIII           Type III restriction enzyme, res subunit
       0.11   12.1   0.0       0.26   11.0   0.0    1.5  1  Siva             Cd27 binding protein (Siva)
       0.13   11.1   0.0       0.33    9.8   0.0    1.6  1  Polyoma_lg_T_C   Polyomavirus large T antigen C-terminus
       0.16   11.6   0.0        7.4    6.2   0.0    2.3  2  AAA_24           AAA domain
       0.18   12.2   0.1         16    5.9   0.0    3.0  2  RNA_helicase     RNA helicase
       0.22   10.7   0.1        9.1    5.4   0.0    2.3  2  DUF2075          Uncharacterized conserved protein (DUF2075)
       0.24   11.4   1.9         13    5.8   0.1    3.0  2  AAA_5            AAA domain (dynein-related subfamily)
       0.27   10.9   0.6         17    5.1   0.0    2.6  2  AAA_30           AAA domain
        0.4   10.9   1.3        6.5    7.0   0.1    3.0  2  Roc              Ras of Complex, Roc, domain of DAPkinase


Domain annotation for each model (and alignments):
>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.4   0.0   5.2e-23   2.5e-20       1     134 [.     597     732 ..     597     735 .. 0.86
   2 !  102.5   0.2   5.6e-32   2.7e-29       1     137 []    1200    1356 ..    1200    1356 .. 0.96

  Alignments for each domain:
  == domain 1  score: 73.4 bits;  conditional E-value: 5.2e-23
                 EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH...............HHHTC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...............xxxxx RF
    ABC_tran   1 lknvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren...............esdee 84 
                 l+++++++ +++ + ++G +G+GKStL+++++g+l+ t+Ge+          + +  ++ +g++pq++ l +++ +r n                   e
  EPX70751.1 597 LRDLNFTIPRNQFTLVLGATGSGKSTLAAAILGELHLTSGEM----------NVPLREECVGYVPQTSWLRNDT-IRANilfgdifdehryrkvI---E 681
                 6899*************************************9..........6788999********9999999.9********98876543322...1 PP

                 ...HHHHHHHSTTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEES CS
                 ...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  85 ...iekalsklglkelkdtvvksspssLSgGqkqrvalarallkkpkllllDE 134
                    +e+  +++   +   t v+s++ssLSgGqkqr++laral ++ +++++D+
  EPX70751.1 682 ascLEADFERFHAGD--LTFVQSNGSSLSGGQKQRISLARALYSNTNVYVFDD 732
                 334666666666666..67888999***************************8 PP

  == domain 2  score: 102.5 bits;  conditional E-value: 5.6e-32
                  EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH......HHHTCHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxx RF
    ABC_tran    1 lknvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren......esdeeiekalsk 91  
                  l+n+sl + + ek+aivG++G+GKStL   l++ +++t+G+i++dg d+++ +le lr++++ +pq+p l +++ vr+n       sdee++++l+ 
  EPX70751.1 1200 LENISLMVAPKEKLAIVGRTGSGKSTLGLSLLRFTNQTSGSIRIDGVDINTVQLETLRRRVSLIPQDPVLISGT-VRSNldpfecVSDEELNDILQV 1295
                  78************************************************************************.**********889998888888 PP

                  STTGG...............TTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                  xxxxx...............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   92 lglke...............lkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137 
                   + +                  dt+v+++++++S+Gq+q +alaral++k+++++lDE ta
  EPX70751.1 1296 TSCDTlvkigsgttgssfaiQLDTPVETGGTNFSQGQRQILALARALVRKSQIIILDESTA 1356
                  887778889999999999999*************************************996 PP

>> ABC_membrane  ABC transporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.5  15.7   1.9e-22   8.9e-20       2     273 ..     263     536 ..     262     537 .. 0.89
   2 !   70.5   7.5   3.6e-22   1.7e-19      37     243 ..     901    1105 ..     865    1112 .. 0.89

  Alignments for each domain:
  == domain 1  score: 71.5 bits;  conditional E-value: 1.9e-22
                   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSTCCHH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTHHHHHH... CS
  ABC_membrane   2 iliillailagvlsplfplvlgrildtlldkgdpet.ealnvysllllllglaqfilallqsyllnvtgerlskrlrrklfkkilrqpmsffdt... 94 
                   +++++l+i++ ++ ++ p+ ++++l+ l +++d+++ + + ++++ll++ ++a++i ++ ++++    + r++  + + +++k+ +  +s       
    EPX70751.1 263 VYLVVLSIFVSLTTFISPYTIKNLLQYLQTQQDNSSiFPIHLLFMLLFGPYVASVIKEY-SVHISRRFMLRTKAGISQLIYEKVVYSKVSQLTMdgs 358
                   67899***********************9977777755555555555555555555555.34455889**********************9998777 PP

                   .SCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH.HSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT CS
  ABC_membrane  95 .nsvGellsrltndvsklrdglgeklglffqslltfvgglivmfy.lgwkltlvllailpliilvsaviakilkklkkkeqkavakassvaeEslsg 189
                     +   + ++l++dv+++ ++  e+++ f++  + + +++ ++   lgw+ + v++ +++  +l+  +i+++l +l++  + + +++ ++++E+l+ 
    EPX70751.1 359 qANIDHIYNLLASDVENIANM-REFISFFIRGPIDVGIAMFFLHQlLGWS-AYVGVLLAIGSALLPLLISSKLAELTRIANRSSDDRIRFTTEILRS 453
                   777889**************7.6888888888888888888888846775.9********************************************* PP

                   HHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSTHHHHHHHHHHHHHHHHH CS
  ABC_membrane 190 irtVkafgreeyflekfekaleeakkagikkaianglligitqllgllsyalalwfGttlvisgelsvgdlvvflslfailfga 273
                   ir+ k fg+e+ +l+++ k+++ +  + ++ +i++ ++ +++ ++++l+++++ + ++t v++ els++ +++ +slf++l ++
    EPX70751.1 454 IRVTKFFGWEQPMLQEIRKKRNIEIANIWRLNILDIIFKSCMKIAPFLCMFIT-FAAFTKVMNRELSPSIAFTSISLFSVLRNQ 536
                   ************************************************99999.99************************9876 PP

  == domain 2  score: 70.5 bits;  conditional E-value: 3.6e-22
                    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTHHHHHHSCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH CS
  ABC_membrane   37 tealnvysllllllglaqfilallqsyllnvtgerlskrlrrklfkkilrqpmsffdtnsvGellsrltndvsklrdglgeklglffqslltfvg 131 
                    +     ++  +++l+++ f++ l +  l++  g ++s+ ++ ++ ++++  p+ +f++  vG++++r+++d+++++++l+ ++  ++  l+ +++
    EPX70751.1  901 F--PMSFLQGYAFLLVIYFVVDLTRGGLFSAGGRKASRSVHERVSEHVFGSPLHWFEKIAVGRVINRFSKDIASVDNSLWVSIENISCCLMALLM 993 
                    5..556777899*********************************************************************************** PP

                    HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  ABC_membrane  132 glivmfylgwkltlvllailpliilvsaviakilkklkkkeqkavakassvaeEslsgirtVkafgreeyflekfekaleeakkagikkaiangl 226 
                    gl+ + ++ + +    + ++ +++ v++v++k  k+l+   ++++++++s++ E+lsg+ +++af +e+ f+ +    l+ ++++++ +  +n++
    EPX70751.1  994 GLGNVTIIMPIFIGPAVLVCTVVYAVAYVYSKAQKQLTACSSSQISPVFSLLGETLSGLTVIRAFKKERMFEMENMIVLDHMLQSQFVSYAINRW 1088
                    ***********999999999999************************************************************************ PP

                    HHHHHHHHHHHHHHHHH CS
  ABC_membrane  227 ligitqllgllsyalal 243 
                    l ++t+ ++ l+ +l++
    EPX70751.1 1089 LAIRTDGISGLVGFLTA 1105
                    **999999877666555 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   0.0   0.00031      0.15      24      50 ..     607     630 ..     597     646 .. 0.84
   2 !   13.4   0.0   8.2e-05     0.039     136     182 ..     706     748 ..     654     783 .. 0.79
   3 !   21.5   0.1   2.7e-07   0.00013     106     209 ..    1236    1396 ..    1201    1402 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00031
                 SSEEEEEESTTSSHHHHHHHHHHHCTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  24 ksftaivGpNGSGKsnlldAilFvLGe 50 
                 ++ft ++G+ GSGKs l  Ai   LGe
  EPX70751.1 607 NQFTLVLGATGSGKSTLAAAI---LGE 630
                 68*******************...664 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 8.2e-05
                 CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 136 lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvael 182
                 +LSgG+k+ ++la       ++ + +y++D+i +aLD +  kkv + 
  EPX70751.1 706 SLSGGQKQRISLA----RALYSNTNVYVFDDIFSALDIATSKKVYKN 748
                 8******987765....4569999***************99999765 PP

  == domain 3  score: 21.5 bits;  conditional E-value: 2.7e-07
                  TSEEEEEETTEEE-HHHHHHHHHCTT-STT.............................................................CS-HHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.............................................................xxxxxx RF
       SMC_N  106 kgeseykingkevtkkevsellesagiske.............................................................lLSgGe 141 
                  + + +++i+g +++  +++ l +++ + ++                                                             ++S G+
  EPX70751.1 1236 QTSGSIRIDGVDINTVQLETLRRRVSLIPQdpvlisgtvrsnldpfecvsdeelndilqvtscdtlvkigsgttgssfaiqldtpvetggtNFSQGQ 1332
                  33456777777777777777777777777778888888888888888888888888888888888888888888888888888888888889***** PP

                  HHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC-SCEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  142 ktLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemlekadklv 209 
                  ++++ala       v+++ + +lDe  a  D++  +++ e+l+   +na +++i++r +++ + dk++
  EPX70751.1 1333 RQILALARA----LVRKSQIIILDESTASVDDTTDRRIQEMLRGVFQNATVLCIAHRIKTVLDYDKIL 1396
                  ***998754....689999**************************************99998888765 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   9.7e-06    0.0046      17      42 ..     602     627 ..     595     631 .. 0.83
   2 !   12.3   0.1   0.00023      0.11      17      38 ..    1205    1226 ..    1200    1228 .. 0.86

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 9.7e-06
      AAA_29  17 ieidlkgatlltGpsGsGKSTllDAi 42 
                 ++i ++++tl+ G++GsGKSTl  Ai
  EPX70751.1 602 FTIPRNQFTLVLGATGSGKSTLAAAI 627
                 66777779*************97665 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 0.00023
      AAA_29   17 ieidlkgatlltGpsGsGKSTl 38  
                  +++ +k+   ++G++GsGKSTl
  EPX70751.1 1205 LMVAPKEKLAIVGRTGSGKSTL 1226
                  5667788899***********8 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.0   4.5e-05     0.021     122     155 ..     600     633 ..     573     652 .. 0.83
   2 !   11.3   0.0   0.00027      0.13     102     160 ..    1182    1241 ..    1160    1278 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 4.5e-05
       T2SSE 122 lrkavrerglilvsGgTgsGKttllyallkeink 155
                 l+  + +++  lv G+TgsGK+tl+ a+l e++ 
  EPX70751.1 600 LNFTIPRNQFTLVLGATGSGKSTLAAAILGELHL 633
                 66667778889******************99875 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 0.00027
       T2SSE  102 eltlddlgae.ealkekiaevlrkavrerglilvsGgTgsGKttllyallkeinksderi 160 
                  +l++++l ++ ++ ++ + e ++  v+ +  + + G TgsGK+tl  +ll + n+++  i
  EPX70751.1 1182 SLDVQQLTVHyGMSAKPVLENISLMVAPKEKLAIVGRTGSGKSTLGLSLLRFTNQTSGSI 1241
                  5677777654155567789999999999***********************999985554 PP

>> DUF87  Helicase HerA, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.2   1.9e-05    0.0088      27      48 ..     611     632 ..     607     641 .. 0.87
   2 !   12.3   0.1   0.00027      0.13      24      45 ..    1211    1232 ..    1201    1243 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.9e-05
       DUF87  27 AilgsTGsGKSntvavLleell 48 
                 ++lg TGsGKS+++a +l el 
  EPX70751.1 611 LVLGATGSGKSTLAAAILGELH 632
                 79****************9985 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 0.00027
       DUF87   24 rHlAilgsTGsGKSntvavLle 45  
                  + lAi+g+TGsGKS++  +Ll+
  EPX70751.1 1211 EKLAIVGRTGSGKSTLGLSLLR 1232
                  579************9877776 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   8.3e-06    0.0039      10      40 ..     595     628 ..     592     798 .. 0.84
   2 ?    7.1   0.1     0.014       6.8      23      35 ..    1214    1226 ..    1203    1230 .. 0.94

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 8.3e-06
      AAA_23  10 frdqeidF...skgltlItGpNGaGKTTildAik 40 
                 f+  +++F    + +tl+ G +G+GK+T+  Ai 
  EPX70751.1 595 FQLRDLNFtipRNQFTLVLGATGSGKSTLAAAIL 628
                 6556677777999*******************96 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.014
      AAA_23   23 lItGpNGaGKTTi 35  
                  +I+G +G+GK+T+
  EPX70751.1 1214 AIVGRTGSGKSTL 1226
                  7***********8 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.3   0.0   0.00064       0.3       5      30 ..     607     632 ..     605     667 .. 0.83
   2 !    9.7   0.3    0.0021      0.98       8      37 ..    1213    1242 ..    1209    1372 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00064
      AAA_22   5 agilvvtGesGtGKTtllrrlleqld 30 
                  ++++v G +G+GK+tl++ +l +l+
  EPX70751.1 607 NQFTLVLGATGSGKSTLAAAILGELH 632
                 5799***************9998886 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.0021
      AAA_22    8 lvvtGesGtGKTtllrrlleqldeeakaee 37  
                  l+++G +G+GK+tl   ll+  ++ +   +
  EPX70751.1 1213 LAIVGRTGSGKSTLGLSLLRFTNQTSGSIR 1242
                  78************9999998866544444 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   5.9e-05     0.028      86     130 ..     593     638 ..     545     643 .. 0.83
   2 ?    7.1   0.1      0.01       4.7      89     130 ..    1199    1241 ..    1176    1246 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 5.9e-05
                  THTTHHHHHHHCTT.SEEEEECSTTSSHHHHHHHHCTT-----S-- CS
  RsgA_GTPase  86 tkegleelkellkd.ktsvlvGqSGvGKStLinallpelelktgev 130
                   + +l++l+  +   ++++++G +G GKStL  a+l+el+l  ge+
   EPX70751.1 593 AQFQLRDLNFTIPRnQFTLVLGATGSGKSTLAAAILGELHLTSGEM 638
                  4567888888887669**********************99988876 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.01
                   THHHHHHHCTT.SEEEEECSTTSSHHHHHHHHCTT-----S-- CS
  RsgA_GTPase   89 gleelkellkd.ktsvlvGqSGvGKStLinallpelelktgev 130 
                    le+++ +++  +  ++vG +G GKStL  +ll  +++  g++
   EPX70751.1 1199 VLENISLMVAPkEKLAIVGRTGSGKSTLGLSLLRFTNQTSGSI 1241
                   5666666666657789************888877666666665 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0       1.3   6.2e+02      37      83 ..     213     267 ..     203     301 .. 0.60
   2 !    7.9   0.0    0.0066       3.1       3      26 ..     611     634 ..     609     646 .. 0.84
   3 !    9.8   0.1    0.0017      0.82       2      22 ..    1213    1233 ..    1212    1271 .. 0.74

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 1.3
                 EEEEEEETTEEEEEEECGGC.........SS..HHHHHHHHHHHHHHHHCTSEEEEEE CS
    MMR_HSR1  37 negrvklkgkeielvDtpGl.........ie..gaseekglgkaflaleeadlillvv 83 
                 +++ +k   +++ l+D+p l         ++  +++ +kgl   +l   +++++ lvv
  EPX70751.1 213 IWKAWK---NPVSLADMPALpntdqtsiwFSsfQKRGKKGLIAMILYSLRVNVVYLVV 267
                 344443...79********833333332211333344446666666666666655555 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0066
                 EEEESTTSSHHHHHHHHHTSTEEE CS
    MMR_HSR1   3 aivGrpNvGKStLinaltgekaiv 26 
                 +++G + +GKStL  a++ge   +
  EPX70751.1 611 LVLGATGSGKSTLAAAILGELHLT 634
                 689***************985444 PP

  == domain 3  score: 9.8 bits;  conditional E-value: 0.0017
                  EEEEESTTSSHHHHHHHHHTS CS
    MMR_HSR1    2 vaivGrpNvGKStLinaltge 22  
                   aivGr+ +GKStL  +l++ 
  EPX70751.1 1213 LAIVGRTGSGKSTLGLSLLRF 1233
                  79************9888874 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.0   0.00032      0.15      30      54 ..     604     628 ..     594     648 .. 0.87
   2 !    8.0   0.0    0.0042         2      27      55 ..    1204    1232 ..    1185    1242 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00032
      AAA_25  30 lpagelallaGapgtGKttlaldla 54 
                 +p++ ++l+ Ga+g+GK+tla  + 
  EPX70751.1 604 IPRNQFTLVLGATGSGKSTLAAAIL 628
                 89******************98765 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0042
      AAA_25   27 kgllpagelallaGapgtGKttlaldlal 55  
                    +++ +e  +++G++g+GK+tl l+l  
  EPX70751.1 1204 SLMVAPKEKLAIVGRTGSGKSTLGLSLLR 1232
                  556677888999*************9976 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.0   0.00014     0.066      25      63 ..     608     658 ..     595     733 .. 0.57
   2 ?    6.5   0.1     0.021        10      27     160 ..    1213    1371 ..    1204    1382 .. 0.54

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 0.00014
      AAA_16  25 elvllsGesGvGKsslvrellralekd............ggiflrgkcdql 63 
                 + +l+ G+ G+GKs+l+ ++l +l  +             g++ ++ + ++
  EPX70751.1 608 QFTLVLGATGSGKSTLAAAILGELHLTsgemnvplreecVGYVPQTSWLRN 658
                 679*****************9877666555444444443234433333333 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.021
      AAA_16   27 vllsGesGvGKsslvrellralekdggiflrgkcdqlesaipysalaqalareellrqllde......aesaeleawrekleeala........... 106 
                  + ++G  G+GKs+l  +llr ++ +    +r + ++          +q+ + ++ +  + ++      +  ++l+++    +e+l+           
  EPX70751.1 1213 LAIVGRTGSGKSTLGLSLLR-FTNQTSGSIRIDGVDI-------NTVQLETLRRRVSLIPQDpvlisgTVRSNLDPFECVSDEELNdilqvtscdtl 1301
                  6799***********99995.5555344455555555.......23333333466666666666666634445555555555555555566666666 PP

      AAA_16  107 ............avpelagaea.....srllellkrllallsrderplvlvlDdlqwadeaslql.laaLlr 160 
                              a++ +++ e      s+  +++ +l++ l r++   +++lD+     +++ +  ++++lr
  EPX70751.1 1302 vkigsgttgssfAIQLDTPVETggtnfSQGQRQILALARALVRKS--QIIILDESTASVDDTTDRrIQEMLR 1371
                  666666666666333333333355334333333333333333323..4777776654444444444555555 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.0   0.00082      0.39      41      59 ..     609     627 ..     593     636 .. 0.81
   2 !    8.8   0.0     0.002      0.94      33      55 ..    1203    1226 ..    1175    1262 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00082
                   SEEEE--TTSSHHHHHHHH CS
  FtsK_SpoIIIE  41 hllvaGatgsGKStalntL 59 
                    +lv+GatgsGKSt   ++
    EPX70751.1 609 FTLVLGATGSGKSTLAAAI 627
                   58***********987666 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.002
                    EEGGGS-..SEEEE--TTSSHHHH CS
  FtsK_SpoIIIE   33 ldlkkma.shllvaGatgsGKSta 55  
                    + l +++   l ++G+tgsGKSt 
    EPX70751.1 1203 ISLMVAPkEKLAIVGRTGSGKSTL 1226
                    444455567899**********96 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0     4e-05     0.019       1      57 [.     610     665 ..     610     679 .. 0.83
   2 ?    3.3   0.0      0.12        57       3      38 ..    1215    1245 ..    1213    1268 .. 0.73

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 4e-05
  Viral_helicase1   1 ivvhGvpGcGKStlirkllrtsliltvnrptaelltegkpklpnlsvrtvdsflmal 57 
                      ++v G+ G+GKStl   +l + l+lt++ +++ l+ e + ++p+ s+ + d++  + 
       EPX70751.1 610 TLVLGATGSGKSTLAAAILGE-LHLTSGEMNVPLREECVGYVPQTSWLRNDTIRANI 665
                      589****************99.*****************777777777666666555 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.12
  Viral_helicase1    3 vhGvpGcGKStlirkllrtsliltvnrptaellteg 38  
                       + G  G+GKStl  +llr      +n+ +  ++ +g
       EPX70751.1 1215 IVGRTGSGKSTLGLSLLRF-----TNQTSGSIRIDG 1245
                       55789************99.....455445555555 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.7      0.01       4.9       1      20 [.     609     628 ..     609     675 .. 0.75
   2 ?    3.5   0.0      0.11        53     165     301 ..     660     769 ..     631     772 .. 0.73
   3 ?    5.1   0.0     0.036        17       3      21 ..    1214    1232 ..    1213    1269 .. 0.77
   4 ?    1.9   0.0      0.33   1.6e+02     236     265 ..    1327    1353 ..    1321    1354 .. 0.92

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.01
      AAA_21   1 lnvliGpNgsGKSnLLdald 20 
                 ++++ G+ gsGKS+L  a+ 
  EPX70751.1 609 FTLVLGATGSGKSTLAAAIL 628
                 799************99994 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.11
      AAA_21 165 rigllnifadyfgfakekrllqrlvrslklveielsdlgegeeliasvderlrergvvflengdgqelparelSdGtkrllalltallralkkgsllli 263
                 +i+ + +f+d f + + ++ ++  + + +  ++++ dl+++  +                          ++lS G+k+ + l+ al++      ++++
  EPX70751.1 660 TIRANILFGDIFDEHRYRKVIEASCLEADFERFHAGDLTFVQSNG-------------------------SSLSGGQKQRISLARALYSNT---NVYVF 730
                 555555555555555555555555555555555555555444333.........................357999999988888888866...89*** PP

      AAA_21 264 DEpEngLHPkllrrll.ellkelsrngaQviltTHSpll 301
                 D++ + L+ +  ++++   +++   ++  vil TH+  l
  EPX70751.1 731 DDIFSALDIATSKKVYkNCFESGLLKDKTVILFTHNINL 769
                 ****************99999999999********9776 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.036
      AAA_21    3 vliGpNgsGKSnLLdaldl 21  
                  +++G+ gsGKS+L   l  
  EPX70751.1 1214 AIVGRTGSGKSTLGLSLLR 1232
                  79***********766633 PP

  == domain 4  score: 1.9 bits;  conditional E-value: 0.33
      AAA_21  236 elSdGtkrllalltallralkkgsllliDE 265 
                  ++S+G++++lal+ al r      ++++DE
  EPX70751.1 1327 NFSQGQRQILALARALVRKS---QIIILDE 1353
                  68***************977...99***99 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   0.0    0.0021         1      37      67 ..     596     627 ..     582     637 .. 0.83
   2 ?    5.1   0.0     0.036        17      44      67 ..    1207    1230 ..    1195    1259 .. 0.88
   3 ?   -0.6   0.1         2   9.7e+02      98     144 ..    1334    1380 ..    1327    1396 .. 0.68

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.0021
   IstB_IS21  37 eLatlsf.iekkenivllGpsGvGKshlaial 67 
                 +L+ l+f i +++  ++lG +G GKs la+a+
  EPX70751.1 596 QLRDLNFtIPRNQFTLVLGATGSGKSTLAAAI 627
                 57777774567888899*************97 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.036
   IstB_IS21   44 iekkenivllGpsGvGKshlaial 67  
                  ++ ke ++++G +G GKs l  +l
  EPX70751.1 1207 VAPKEKLAIVGRTGSGKSTLGLSL 1230
                  667999************998877 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 2
   IstB_IS21   98 klaralkrllkv.dllilDdlgllpldqaeaellfeviekryerrsii 144 
                  ++   +++l++  +++ilD+  +  +d+   + + e++   +++++++
  EPX70751.1 1334 QILALARALVRKsQIIILDES-TASVDDTTDRRIQEMLRGVFQNATVL 1380
                  444555555554399999996.56677777777778777777766655 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0    0.0051       2.4      19      41 ..     610     632 ..     598     644 .. 0.83
   2 ?    5.0   0.0     0.027        13      21      53 ..    1215    1247 ..    1200    1252 .. 0.86

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0051
  Zeta_toxin  19 illgGqpGAGKselaellkdele 41 
                  l+ G++G+GKs+la+++  el+
  EPX70751.1 610 TLVLGATGSGKSTLAAAILGELH 632
                 6788**************99986 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.027
  Zeta_toxin   21 lgGqpGAGKselaellkdelerqgnvvrldpDd 53  
                  ++G +G+GKs+l   l + ++++++ +r+d+ d
  EPX70751.1 1215 IVGRTGSGKSTLGLSLLRFTNQTSGSIRIDGVD 1247
                  78**********999999999999****99755 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.1    0.0052       2.4      22      50 ..     609     637 ..     605     770 .. 0.77
   2 ?    5.5   0.1     0.018       8.4      23      41 ..    1213    1231 ..    1199    1245 .. 0.80

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0052
                 EEEEEESTTSSHHHHHHHHCCSHCCCCCC CS
      NB-ARC  22 vvalvGmgGvGKttlakqilnksdevegr 50 
                 +  + G  G+GK+tla+ il +++ + g+
  EPX70751.1 609 FTLVLGATGSGKSTLAAAILGELHLTSGE 637
                 55688**************9987766664 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.018
                  EEEEESTTSSHHHHHHHHC CS
      NB-ARC   23 valvGmgGvGKttlakqil 41  
                  +a+vG+ G+GK+tl  + l
  EPX70751.1 1213 LAIVGRTGSGKSTLGLSLL 1231
                  89***********976655 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0     0.015       7.3      29      58 ..     603     632 ..     598     642 .. 0.83
   2 ?    6.4   0.1     0.012       5.6      26      58 ..    1203    1235 ..    1189    1244 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.015
       AAA_7  29 llknkkpvllvGptGtGKtviikdllkkld 58 
                  + +++ +l+ G tG+GK++++  +l +l+
  EPX70751.1 603 TIPRNQFTLVLGATGSGKSTLAAAILGELH 632
                 56678889**************99988876 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.012
       AAA_7   26 lelllknkkpvllvGptGtGKtviikdllkkld 58  
                  ++l+++ k ++ +vG tG+GK+++  +ll+  +
  EPX70751.1 1203 ISLMVAPKEKLAIVGRTGSGKSTLGLSLLRFTN 1235
                  5688999999*************9988887665 PP

>> AIG1  AIG1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.0    0.0051       2.4       4      39 ..     611     646 ..     609     655 .. 0.85
   2 ?   -2.8   0.0       6.7   3.1e+03     108     129 ..     747     769 ..     733     778 .. 0.73
   3 ?    6.1   0.2     0.013       6.2       3      22 ..    1213    1232 ..    1211    1255 .. 0.86

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0051
                 EEESSTTSSHHHHHHHHHTS--SS--TTTS---SS- CS
        AIG1   4 vlvGktgnGkSaTgNsilgkkaFesklsaqsvtkkc 39 
                 +++G tg+GkS+ + +ilg+   +s   + ++ ++c
  EPX70751.1 611 LVLGATGSGKSTLAAAILGELHLTSGEMNVPLREEC 646
                 789*****************9999887776666666 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 6.7
                 HHHHCGGGG.GGEEEEEEEGGGG CS
        AIG1 108 kelFGekil.kylivvftrkddl 129
                 k++F++  l ++++++ft++ +l
  EPX70751.1 747 KNCFESGLLkDKTVILFTHNINL 769
                 67899888735899****98665 PP

  == domain 3  score: 6.1 bits;  conditional E-value: 0.013
                  EEEESSTTSSHHHHHHHHHT CS
        AIG1    3 ivlvGktgnGkSaTgNsilg 22  
                  + +vG+tg+GkS+ g s+l+
  EPX70751.1 1213 LAIVGRTGSGKSTLGLSLLR 1232
                  679************99997 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.0    0.0048       2.3       2      32 ..     611     641 ..     610     669 .. 0.86
   2 ?    3.2   0.2      0.24   1.1e+02      38      95 ..    1327    1376 ..    1213    1391 .. 0.58

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0048
                 EEESSTTSSHHHHHHHHHHHHTHEEEEEETT CS
         AAA   2 llyGppGtGKTllakavakelgvefleisgs 32 
                 l+ G  G GK++la a+  el+ +  e++++
  EPX70751.1 611 LVLGATGSGKSTLAAAILGELHLTSGEMNVP 641
                 789*****************98877777665 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.24
                  STTHHHHHHHHHHHHHHHTS.TSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHH CS
         AAA   38 yvgesekkirelfkeakeka.kpsilfiDEidalaksrsgseseeeervvnqLlteldg 95  
                   ++++    r++++ a++   k  i+++DE  a + +        ++r+++ L  ++++
  EPX70751.1 1327 NFSQG---QRQILALARALVrKSQIIILDESTASVDDT------TDRRIQEMLRGVFQN 1376
                  33344...444444444444334899999988777666......666666666655554 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.0    0.0051       2.4       3      24 ..     611     632 ..     610     657 .. 0.88
   2 ?    3.9   0.0      0.12        56       4      21 ..    1215    1232 ..    1213    1286 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0051
      AAA_33   3 llvGlpGsGKstlaerllkklg 24 
                 l+ G+ GsGKstla  +l +l+
  EPX70751.1 611 LVLGATGSGKSTLAAAILGELH 632
                 678************9998775 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.12
      AAA_33    4 lvGlpGsGKstlaerllk 21  
                  +vG  GsGKstl  +ll+
  EPX70751.1 1215 IVGRTGSGKSTLGLSLLR 1232
                  79*********9888765 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.0     0.007       3.3      17      44 ..     602     629 ..     591     652 .. 0.78
   2 ?    4.6   0.0     0.049        23       8      49 ..    1196    1237 ..    1190    1255 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.007
                      HHCTSSS-EEEECSTTSSHHHHHHHHHH CS
  Sigma54_activat  17 kvaktdlsvlitGesGtGKellaraihe 44 
                       +++ +  +l++G +G+GK++la ai  
       EPX70751.1 602 FTIPRNQFTLVLGATGSGKSTLAAAILG 629
                      556677789**************99854 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.049
                       HHHHHHHHHHHCTSSS-EEEECSTTSSHHHHHHHHHHHSTTT CS
  Sigma54_activat    8 lkelleqikkvaktdlsvlitGesGtGKellaraiheaskrk 49  
                        k +le+i+ +++ + ++ i+G +G+GK++l  ++ + ++++
       EPX70751.1 1196 AKPVLENISLMVAPKEKLAIVGRTGSGKSTLGLSLLRFTNQT 1237
                       5678899999999999*************9987777666554 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.1    0.0021         1       2      28 ..     611     637 ..     610     641 .. 0.88
   2 ?    2.7   0.1      0.25   1.2e+02       1      20 [.    1213    1232 ..    1213    1258 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0021
                 EEEEBTTTTHHHHHHHHHTS--S---S CS
   Dynamin_N   2 avvGsqSsGKSSvlnaLlgedilprgp 28 
                 +v+G++ sGKS+++ a+lge  l +g+
  EPX70751.1 611 LVLGATGSGKSTLAAAILGELHLTSGE 637
                 599****************98887775 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.25
                  EEEEEBTTTTHHHHHHHHHT CS
   Dynamin_N    1 iavvGsqSsGKSSvlnaLlg 20  
                  +a+vG + sGKS++  +Ll+
  EPX70751.1 1213 LAIVGRTGSGKSTLGLSLLR 1232
                  589**********9666665 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.1    0.0036       1.7       3      24 ..     610     631 ..     608     641 .. 0.86
   2 ?    3.4   0.1      0.14        65       3      16 ..    1213    1226 ..    1211    1236 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0036
                 EEEEC-TTTCHHHHHHHHHHHH CS
       NACHT   3 vilqGeaGsGKTtLlqklalaw 24 
                  ++ G+ GsGK+tL++ +  ++
  EPX70751.1 610 TLVLGATGSGKSTLAAAILGEL 631
                 5899************998665 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.14
                  EEEEC-TTTCHHHH CS
       NACHT    3 vilqGeaGsGKTtL 16  
                  +++ G+ GsGK+tL
  EPX70751.1 1213 LAIVGRTGSGKSTL 1226
                  689**********9 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.0    0.0032       1.5      16      38 ..     604     626 ..     599     639 .. 0.89
   2 ?    2.1   0.1      0.22     1e+02      22      38 ..    1213    1229 ..    1207    1239 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0032
      ATPase  16 ipegrvvlitGepGtGKtifalq 38 
                 ip+++ +l+ G +G+GK+++a+ 
  EPX70751.1 604 IPRNQFTLVLGATGSGKSTLAAA 626
                 8******************9975 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.22
      ATPase   22 vlitGepGtGKtifalq 38  
                    i+G +G+GK++++l 
  EPX70751.1 1213 LAIVGRTGSGKSTLGLS 1229
                  689***********975 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.1     0.024        11      17      43 ..     602     627 ..     597     837 .. 0.77
   2 ?    5.0   0.0     0.035        16      25      69 ..    1212    1252 ..    1200    1357 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.024
      AAA_15  17 veidlseeltvliGkNnsGKSsileal 43 
                 ++i+ +  +t++ G+ +sGKS+++ a+
  EPX70751.1 602 FTIPRNQ-FTLVLGATGSGKSTLAAAI 627
                 6677445.*****************99 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.035
      AAA_15   25 ltvliGkNnsGKSsilealdlFlnnkekknkkvikiekedleife 69  
                     ++G+ +sGKS++   l  F n++    +  i i+  d+++ +
  EPX70751.1 1212 KLAIVGRTGSGKSTLGLSLLRFTNQT----SGSIRIDGVDINTVQ 1252
                  679************99999999988....566667766666655 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.0     0.013       6.1       2      19 ..     611     629 ..     611     732 .. 0.75
   2 ?    3.3   0.1      0.23   1.1e+02       3      18 ..    1215    1230 ..    1213    1259 .. 0.81

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.013
      AAA_18   2 lltGtpGvGKttlakeL.s 19 
                 l+ G+ G+GK+tla ++  
  EPX70751.1 611 LVLGATGSGKSTLAAAIlG 629
                 589***********98841 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.23
      AAA_18    3 ltGtpGvGKttlakeL 18  
                  + G  G+GK+tl+  L
  EPX70751.1 1215 IVGRTGSGKSTLGLSL 1230
                  8899********9877 PP

>> AAA_27  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00044      0.21      14      47 ..     595     628 ..     593     633 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00044
      AAA_27  14 ftdrsldfsaeeadlhliyGpNEAGKstalrAis 47 
                 f+ r l+f   +++++l++G+  +GKst+ +Ai 
  EPX70751.1 595 FQLRDLNFTIPRNQFTLVLGATGSGKSTLAAAIL 628
                 7778999**9*********************996 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.0    0.0098       4.6      22      54 ..     605     637 ..     580     642 .. 0.82
   2 ?   -1.9   0.1       6.1   2.9e+03      67     110 ..     770     819 ..     742     841 .. 0.47
   3 ?    1.5   0.0      0.55   2.6e+02      22      45 ..    1208    1231 ..    1189    1242 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0098
                 .TTSEEEEEESTTSTHHHHHHHHHHHH-S.... CS
      ResIII  22 krdkrglikmaTGtGKTlvaaklierllkkgke 54 
                  r++  l+  aTG+GK+ +aa++  +l+   +e
  EPX70751.1 605 PRNQFTLVLGATGSGKSTLAAAILGELHLTSGE 637
                 6777788999*************9999987666 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 6.1
                 HHHHHHHGGGGTGG.....GEEEESSS-B--............-SEEEEE CS
      ResIII  67 leqtleefkkflseayke.igkkvsgdkkka.....kekdstnkkilvtt 110
                    + +++  + + ++ +  +k+v+++  ++     +  + + ++i v++
  EPX70751.1 770 SISMVDNIILLENATARFvPSKEVKEQLSSFlsihhNDTSHEPAQINVSN 819
                 44444444333333333322222222222222222222233334444444 PP

  == domain 3  score: 1.5 bits;  conditional E-value: 0.55
                  .TTSEEEEEESTTSTHHHHHHHHH CS
      ResIII   22 krdkrglikmaTGtGKTlvaakli 45  
                    ++++ i+  TG+GK+ + ++l 
  EPX70751.1 1208 APKEKLAIVGRTGSGKSTLGLSLL 1231
                  4678899*********99887765 PP

>> Siva  Cd27 binding protein (Siva)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00055      0.26      10      59 ..     315     367 ..     311     381 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00055
        Siva  10 dvaplqlkvhvsekelsk...GvfaekysrevfektkqllfkGakavldkiwd 59 
                   +   + vh+s++ + +   G+    y++ v+ k  ql + G++a +d+i++
  EPX70751.1 315 ASVIKEYSVHISRRFMLRtkaGISQLIYEKVVYSKVSQLTMDGSQANIDHIYN 367
                 55567899*****98765456999999************************97 PP

>> Polyoma_lg_T_C  Polyomavirus large T antigen C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0    0.0007      0.33     145     190 ..     597     642 ..     589     649 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.0007
  Polyoma_lg_T_C 145 lkcivlnipkkrywlfkgpidsgkttlaaalldlcggkalnvnlpl 190
                     l+ + + ip++++ l  g   sgk+tlaaa+l      + ++n+pl
      EPX70751.1 597 LRDLNFTIPRNQFTLVLGATGSGKSTLAAAILGELHLTSGEMNVPL 642
                     5667899************************977777777777777 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0      0.17        78       5      22 ..     610     627 ..     606     635 .. 0.85
   2 ?    6.2   0.0     0.016       7.4       3      46 ..    1211    1251 ..    1209    1303 .. 0.76

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.17
      AAA_24   5 iliyGpsgiGKTtlakel 22 
                  l+ G  g+GK+tla+ +
  EPX70751.1 610 TLVLGATGSGKSTLAAAI 627
                 5899**********9876 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.016
      AAA_24    3 lkiliyGpsgiGKTtlakelgpkplfidtekGlksldadkfpdi 46  
                   k++i+G  g+GK+tl ++l     f +   G+ ++d+ +++++
  EPX70751.1 1211 EKLAIVGRTGSGKSTLGLSL---LRFTNQTSGSIRIDGVDINTV 1251
                  689**************999...677777777778888877766 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.0     0.034        16       3      23 ..     612     632 ..     610     672 .. 0.79
   2 ?    2.8   0.0      0.32   1.5e+02       2      20 ..    1214    1232 ..    1213    1249 .. 0.80

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.034
  RNA_helicase   3 lyGpsgeGKStlakeLakall 23 
                   + G++g GKStla  +  +l 
    EPX70751.1 612 VLGATGSGKSTLAAAILGELH 632
                   78***********99877776 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.32
  RNA_helicase    2 wlyGpsgeGKStlakeLak 20  
                     ++G++g GKStl  +L +
    EPX70751.1 1214 AIVGRTGSGKSTLGLSLLR 1232
                    589*********9877665 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0     0.019       9.1       3      25 ..     609     631 ..     607     658 .. 0.85
   2 ?    3.0   0.0      0.11        51       5      24 ..    1214    1233 ..    1210    1260 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.019
     DUF2075   3 vvlVtGvaGtGKtvvllnllael 25 
                   lV G++G+GK+ ++ ++l el
  EPX70751.1 609 FTLVLGATGSGKSTLAAAILGEL 631
                 5799****************999 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.11
     DUF2075    5 lVtGvaGtGKtvvllnllae 24  
                   + G++G+GK+ ++l+ll  
  EPX70751.1 1214 AIVGRTGSGKSTLGLSLLRF 1233
                  578*************9865 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.1      0.12        58       3      20 ..     611     628 ..     610     640 .. 0.85
   2 ?    5.8   0.1     0.027        13       3      26 ..    1214    1237 ..    1212    1245 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.12
                 EEE--SSSSHHHHHHHGG CS
       AAA_5   3 lLvGppGtgKselaerla 20 
                 l++G++G+gKs+la  ++
  EPX70751.1 611 LVLGATGSGKSTLAAAIL 628
                 789**********98876 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.027
                  EEE--SSSSHHHHHHHGGGGBS-- CS
       AAA_5    3 lLvGppGtgKselaerlaaalnre 26  
                   +vG +G+gKs+l  +l++++n++
  EPX70751.1 1214 AIVGRTGSGKSTLGLSLLRFTNQT 1237
                  589*****************9876 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0     0.036        17      17      41 ..     606     631 ..     596     649 .. 0.81
   2 ?    2.9   0.4      0.17        79      21      45 ..    1213    1237 ..    1203    1383 .. 0.69

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.036
      AAA_30  17 gdrvavltGpAGtGKttalkal.rea 41 
                 +++++++ G+ G+GK+t+ +a+  e+
  EPX70751.1 606 RNQFTLVLGATGSGKSTLAAAIlGEL 631
                 567999************99984455 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.17
      AAA_30   21 avltGpAGtGKttalkalreaweaa 45  
                   +++G+ G+GK+t+  +l +  ++ 
  EPX70751.1 1213 LAIVGRTGSGKSTLGLSLLRFTNQT 1237
                  5799********9976665555555 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.1      0.95   4.5e+02       3      19 ..     611     627 ..     610     635 .. 0.86
   2 ?    7.0   0.1     0.014       6.5       1      43 [.    1212    1252 ..    1212    1262 .. 0.64

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.95
                 EEESSTTSSHHHHHHCH CS
         Roc   3 vlvGdsgvGKtsllkrf 19 
                 +++G +g+GK++l+  +
  EPX70751.1 611 LVLGATGSGKSTLAAAI 627
                 689**********9876 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.014
                  EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGG CS
         Roc    1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtk 43  
                  K+ +vG +g+GK++l  ++++  f+++++  i +d ++ ++++
  EPX70751.1 1212 KLAIVGRTGSGKSTLGLSLLR--FTNQTSGSIRIDGVDINTVQ 1252
                  899************998884..44444444444443333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1430 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       726  (0.0404931); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        78  (0.00435049); expected 17.9 (0.001)
Passed Fwd filter:                        38  (0.00211947); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              38  [number of targets reported over threshold]
# CPU time: 1.00u 0.31s 00:00:01.31 Elapsed: 00:00:00.49
# Mc/sec: 8755.26
//
Query:       EPX70752.1  [L=504]
Description: aldehyde dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     6e-183  608.6   0.0   6.8e-183  608.4   0.0    1.0  1  Aldedh    Aldehyde dehydrogenase family


Domain annotation for each model (and alignments):
>> Aldedh  Aldehyde dehydrogenase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  608.4   0.0  3.8e-187  6.8e-183       6     462 .]      37     494 ..      32     494 .. 0.98

  Alignments for each domain:
  == domain 1  score: 608.4 bits;  conditional E-value: 3.8e-187
                 S.SEEEEEETTTCEEEEEEE-B-HHHHHHHHHHHHHHHH...HHTTS-HHHHHHHHHHHHHHHHHTHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH CS
      Aldedh   6 s.etievinPatgeviakvpaataedvdaavaaAkeafk...awaklpaeeRaeiLrkaadlleerkeelaeletletGkplaearaeveeaidvlryy 100
                 + ++++v++P+t++ i++v +a++edvd av+aA++af+    w+k + +eR+++L k+ad++ee+ e la +etl++Gk+++ ar++v+ a++++ryy
  EPX70752.1  37 NgGRVKVFSPSTEKLICEVVDADEEDVDVAVKAARAAFQrdaPWRKFSSAERGRCLTKLADYVEENLEYLASIETLDNGKSITLARGDVQAAANCFRYY 135
                 44789**********************************8777******************************************************** PP

                 HHHHHHHSEEEEEECTTEEEEEEEEE-SEEEEEE-SSSCCHHHHHHHHHHHHTT-EEEEEE-TTSHHHHHHHHHHHHHTTS-TTSEEE--SSTCCHHHH CS
      Aldedh 101 aelaeklegevlpssegklalvrrePlGvvgaItPWNfPlllaawklapalaaGNtvvlKPaeetplsalllaelfeeaglPkgvlnvvtgsgsevgea 199
                  ++a+k +g++++++ +++a++r+eP+Gv+g+I+PWNfP+l++awk+ pa+a+GNtv+lK ae tplsal+l++++e ag+P+gv+nv++g+g+ +g+a
  EPX70752.1 136 GGWADKDYGQTIETDVSRFAYTRHEPIGVCGQIIPWNFPFLMCAWKIGPAVACGNTVILKTAELTPLSALVLTQFVEPAGFPPGVINVLSGDGRRCGNA 234
                 **************99*********************************************************************************** PP

                 HHH-TTESEEEEES-HHHHHHHHHH.HHCTTSEEEEEE---EEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHT-- CS
      Aldedh 200 lvehpevdkvsftGstevgrkiaka.aaknlkrvtlElGGknplivledaDldkaveaivkgafgnaGQvCiaasrllvqesiydefveklveaakklk 297
                 ++ h ++dk++ftGst vgr ++++ aa+nlk+vtlElGGk+p+iv++daDl++a+ ++ +g+f+n+GQvC+a+sr++vqe++ydefv ++v++ak+lk
  EPX70752.1 235 MACHMDIDKIAFTGSTGVGRMVMRSaAASNLKKVTLELGGKSPNIVFDDADLEEAAVWVNFGIFYNSGQVCCAGSRVYVQENVYDEFVRRVVNKAKSLK 333
                 *************************677*********************************************************************** PP

                 BS-TTSTT-SB---SSHHHHHHHHHHHHHHHHTTSEEEE-TTE.SB-SSSTTEE--EEEES-TTTSHHHHS---SSEEEEEEESSHHHHHHHHHSSSEE CS
      Aldedh 298 vgdpldedtdvGPliseaqlekvekyveeakeegaklllGgereeaglekgyfvePtvlanvtpdmriaqeEiFGPVlsvikfkdeeeaieiaNdteyG 396
                 vgdp+de+t  G+++s++q+e++ +y+e+++++gakl lGg   +++   gyfvePt+l++vt+dm++ +eEiFGPVl++ikfk++eeai+  N++ +G
  EPX70752.1 334 VGDPFDEETFQGAQVSKQQYERIIGYIESGIQHGAKLELGG---KPHGHIGYFVEPTILSGVTEDMAVGKEEIFGPVLAIIKFKTVEEAIRRGNNSTFG 429
                 *****************************************...8899*************************************************** PP

                 SEEEEE-SBHHHHHHHHHHS-SSEEEESSSST--TTTSEB--CGGGEES-BSHHHHHHHTEEEEEE CS
      Aldedh 397 LaagvftkdleraervaerleaGnvyiNdsttgaaealpfgGvkqSglGreggkegleeytevktv 462
                 Laagv+t+dl++a +v+++leaG+v++N+++  +++  pfgG+k+Sg+Gre g++gl++yt++k+v
  EPX70752.1 430 LAAGVHTNDLRNAVKVSNSLEAGTVWVNCYNLLHHQI-PFGGYKESGIGRELGSYGLTNYTQTKSV 494
                 ******************************9999999.**************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (504 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       475  (0.0264934); expected 358.6 (0.02)
Passed bias filter:                      452  (0.0252106); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.29s 00:00:00.85 Elapsed: 00:00:00.48
# Mc/sec: 3131.11
//
Query:       EPX70753.1  [L=619]
Description: hypothetical protein SOCG_04204 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.4e-21   75.4   8.2    3.3e-15   55.7   3.9    3.3  3  LCD1          DNA damage checkpoint protein
      0.003   17.6   1.7     0.0096   16.0   1.7    1.9  1  SurA_N        SurA N-terminal domain
     0.0087   15.3   2.6      0.014   14.7   2.6    1.2  1  ISG65-75      Invariant surface glycoprotein
  ------ inclusion threshold ------
      0.057   13.6   7.7       0.17   12.2   7.7    1.8  1  Seryl_tRNA_N  Seryl-tRNA synthetase N-terminal domain
       0.18   12.7   6.6      0.088   13.7   4.2    1.8  2  DUF4482       Domain of unknown function (DUF4482)
       0.38    9.9   4.2       0.75    9.0   4.2    1.4  1  TMPIT         TMPIT-like protein
        0.5    9.6   9.0      0.032   13.5   1.3    2.5  3  Rh5           Rh5 coiled-coil domain
        0.8    8.0   6.1        1.1    7.6   6.1    1.2  1  WDCP          WD repeat and coiled-coil-containing protein fa
        2.3    7.1   8.6        1.5    7.7   7.1    1.4  1  DUF4639       Domain of unknown function (DUF4639)


Domain annotation for each model (and alignments):
>> LCD1  DNA damage checkpoint protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.7   3.9   1.6e-18   3.3e-15       6     127 ..      23     263 ..      21     341 .. 0.82
   2 !   10.6   0.0   7.1e-05      0.14     425     530 ..     479     585 ..     455     593 .. 0.76
   3 !   10.7   0.0   6.8e-05      0.13     580     613 .]     586     619 .]     582     619 .] 0.84

  Alignments for each domain:
  == domain 1  score: 55.7 bits;  conditional E-value: 1.6e-18
                 HHHHHHCCHHH......................................................................HHHHHHHHHHHHHHHHHH CS
        LCD1   6 LelLeqekeke......................................................................leklknskkqlkesheee 34 
                 L++Le++++++                                                                      le+l++s++q +es++++
  EPX70753.1  23 LDELEKQAQQQvlsqkpapasspsvqttlanplnsqvplsqgidygslnadelqkqllirggenailrsniakqaeqnnltLESLNRSIQQQQESYQKK 121
                 666777777777777777777777777777777777777777777777777777777777777777777777777777777****************** PP

                 HHHHHHHHHHHHHHCCCHHCHHTTTTTT..H.HHH------TT---SSS--...............................THHHHHHHHH....... CS
        LCD1  35 lekLkkevqkleDekkFlenElrslset..k.sqaskksaeedtdnsssvs...............................kKkRKieestaeda... 96 
                 le+L+ke+++++++++F+e+E++++ e+  k ++ +k+s+ + ++++ +++                               kKkRKi+  ++++    
  EPX70753.1 122 LEELQKEIEYAKTKSLFHEREAQEAVESmkKlQRDAKSSTVSLGSSQRTSTdgfpsvdhlfpsasqadpahkakvtpkagtlKKKRKISLPQHTEGtrp 220
                 **************************99866777788888888888888879************************************98876554777 PP

                 ....................HHHTSTTT--TTHHHHHHHHH---SS CS
        LCD1  97 ........slsls.......lkkkviklqketslffdslllhkilG 127
                             s       + +++   qk+++ +f s+ l  il 
  EPX70753.1 221 kessaqhdT---SfpihssnMIQELFVFQKREEILFLSRNLTNILN 263
                 766554440...1555555589999999997777776666666655 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 7.1e-05
                 HHHGGGGTHHHHHHHHHHHH..TT-SHHHHTTHHHHHHH..HHHHHHHHHHHTS--TTHHHHHHHHHHHHHHHHHHHHHT-S------...-TTTHHHH CS
        LCD1 425 wlltLklkvlsllenliivk..keisklinkellksllr..liskeQelllsgqrsknldlrielieslvkliyylwiqeseelseei...ikelesel 516
                 ++ ++++++lsl++n+++ +   ++++l n   ++s ++  l +++  ll+       +    +  ++l+++i++l+     +ls+      + l s++
  EPX70753.1 479 KWKEIHRTILSLITNFLQKNraITTEILRNCYPVISSFAlgLCWYHHRLLSA------MFDTADTADILMSIIRLLYLIAPADLSSRLmsaGNGLHSRF 571
                 56689*************9955444556666666666542279******999......666666777777777777777788888887444567***** PP

                 HHHHHHHHGGGG-- CS
        LCD1 517 vvaLsriafgstes 530
                 +++L+ + fg+ e+
  EPX70753.1 572 IYSLASCTFGDFEN 585
                 **********9876 PP

  == domain 3  score: 10.7 bits;  conditional E-value: 6.8e-05
                 HH-------HHHHHHHTTTT---HHHHHHHHH-X CS
        LCD1 580 glevkyeeetvelAreiLescvslEeaDnLYlnm 613
                  l     +et  l   +Le+c+s+Ee+++LY n+
  EPX70753.1 586 HLFGDDASETTSLGSHLLETCLSPEELEQLYNNF 619
                 55556678999999*****************997 PP

>> SurA_N  SurA N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   1.7   4.8e-06    0.0096      70     115 ..      87     132 ..      72     135 .. 0.89

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 4.8e-06
      SurA_N  70 eelnqaiaeiAkeNkltldqlraalaedGlsydefreqiRkEiiis 115
                 + l+  ia+ A++N+ltl+ l+++++++  sy++  e++ kEi  +
  EPX70753.1  87 AILRSNIAKQAEQNNLTLESLNRSIQQQQESYQKKLEELQKEIEYA 132
                 45788999**********************************9765 PP

>> ISG65-75  Invariant surface glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   2.6   6.8e-06     0.014      72     145 ..      96     168 ..      77     179 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 6.8e-06
    ISG65-75  72 kvdyyvekleslleeakekgtltesdaeklkkaceeAkaknkkarekakkalekaekaskkakeaakkAlGeel 145
                 + ++    lesl ++ ++++++++++ e+l+k++e Ak k    +++a++a+e ++k+ ++ak+++   lG+ +
  EPX70753.1  96 QAEQNNLTLESLNRSIQQQQESYQKKLEELQKEIEYAKTKSLFHEREAQEAVESMKKLQRDAKSSTV-SLGSSQ 168
                 555666678899999999*********************************************9874.577744 PP

>> Seryl_tRNA_N  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   7.7   8.3e-05      0.17      32      87 ..     102     161 ..      71     171 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 8.3e-05
                   HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCTT....S-TCCCCCCCHHHHHHHHHHH CS
  Seryl_tRNA_N  32 leldekrrelqveleelqaerNelskeIgkakkkk....edaeeliaevkelkeelkale 87 
                   l l++  r++q++ e+ q++  el+keI+ ak k      +a+e ++++k+l+ + k  +
    EPX70753.1 102 LTLESLNRSIQQQQESYQKKLEELQKEIEYAKTKSlfheREAQEAVESMKKLQRDAKSST 161
                   6788899**************************99***99*************9999876 PP

>> DUF4482  Domain of unknown function (DUF4482)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0         9   1.8e+04      70      90 ..      27      46 ..      12      59 .. 0.48
   2 ?   13.7   4.2   4.4e-05     0.088      32     108 ..     111     189 ..     103     238 .. 0.71

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 9
     DUF4482 70 ekvsqqkevesspkspksgqs 90
                ek+ qq+  +++p  p s+ s
  EPX70753.1 27 EKQAQQQVLSQKPA-PASSPS 46
                22233333222222.444433 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 4.4e-05
     DUF4482  32 wesqwkelqkkieeLqkevklrrkinmnerakviildkekvsqqkevesspkspksgqsvpeselrslsd..sdaleke 108
                   +q    qkk+eeLqke+++ ++++   +++  +  ++  + q+ ++ss  s  s+q+ ++ ++ s+++   +a + +
  EPX70753.1 111 IQQQQESYQKKLEELQKEIEYAKTKSLFHEREAQEAVESMKKLQRDAKSSTVSLGSSQRTSTDGFPSVDHlfPSASQAD 189
                 57899999************99997776666666666666666666677777788888867667777777553333333 PP

>> TMPIT  TMPIT-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   4.2   0.00038      0.75       7      63 ..     104     160 ..      94     184 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00038
       TMPIT   7 lekefkeleetakeykqkleelsklqskcskeikkqkkrlkelksslkklkksvkee 63 
                 le+  +++++++++y++kleel+k ++  +++   ++++++e  +s+kkl++++k++
  EPX70753.1 104 LESLNRSIQQQQESYQKKLEELQKEIEYAKTKSLFHEREAQEAVESMKKLQRDAKSS 160
                 566678899999999999999999999999999999999999999999999886643 PP

>> Rh5  Rh5 coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   1.3   1.6e-05     0.032     145     193 ..     113     161 ..      81     164 .. 0.88
   2 ?   -2.3   0.2       1.1   2.1e+03      89     112 ..     287     309 ..     254     314 .. 0.67
   3 ?    0.1   0.0       0.2     4e+02     111     144 ..     464     497 ..     408     502 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.6e-05
         Rh5 145 lesknlidklkFlkkeiedIinkynkhlkkikkaeslikkitkedkisk 193
                  +++++ +kl+ l+keie+ + k+ +h  + ++a + +kk++ ++k+s+
  EPX70753.1 113 QQQESYQKKLEELQKEIEYAKTKSLFHEREAQEAVESMKKLQRDAKSST 161
                 4688999************************************999865 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 1.1
         Rh5  89 scynsnkcndavykkyaelyksei 112
                 +c++++ ++++ y +y++++++ i
  EPX70753.1 287 NCIYNSDLSSE-YDDYQNSVIQAI 309
                 56666666665.666666555554 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.2
         Rh5 111 einnklskiknsainkdkeilksikslinilkke 144
                  ++  ++++  ++i k kei+ +i sli++  ++
  EPX70753.1 464 FVEPTKEENDVYSIVKWKEIHRTILSLITNFLQK 497
                 56667777888999*************9986555 PP

>> WDCP  WD repeat and coiled-coil-containing protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   6.1   0.00054       1.1     440     593 ..      96     268 ..      69     321 .. 0.77

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.00054
        WDCP 440 tssesqssasalsslln..kaekkklieslskesqkqkrellltastsiqseksgrkLieeiksleqsplssvvdlsekassessvaletldaepvnrs 536
                 ++++++ +  +l+ +++   ++ +k++e+l+ke + +k + l+ ++++++  +s +kL ++ ks++ s  ss+   ++   s   +   + +a+p+++ 
  EPX70753.1  96 QAEQNNLTLESLNRSIQqqQESYQKKLEELQKEIEYAKTKSLFHEREAQEAVESMKKLQRDAKSSTVSLGSSQRTSTDGFPSVDHLFPSASQADPAHKA 194
                 333333333333333330044568999************************************989899998888777776666666677789999999 PP

        WDCP 537 aalasasstsdessrpespkve.................kkknlekekeaeqlskelerlsekltevqqsLsel 593
                  ++++a++ +++++ + ++++e                 +++n+ +e  + q  +e+  ls++lt++ ++ s l
  EPX70753.1 195 KVTPKAGTLKKKRKISLPQHTEgtrpkessaqhdtsfpiHSSNMIQELFVFQKREEILFLSRNLTNILNCYSVL 268
                 99998887777666666666668888888888888888777777777777777788888888888887776655 PP

>> DUF4639  Domain of unknown function (DUF4639)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   7.1   0.00074       1.5     152     232 ..      95     176 ..      81     230 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.00074
     DUF4639 152 gsvdqiplgrswldrgsqeqtesseks.pelrvtpgppptpelfqeagprdpleeldgqersklssagslnaslqlsvevas 232
                 ++ +q  l    l+r  q+q+es +k  +el+   +   t  lf+e ++++++e +++ +r++ ss+ sl +s+++s++  +
  EPX70753.1  95 KQAEQNNLTLESLNRSIQQQQESYQKKlEELQKEIEYAKTKSLFHEREAQEAVESMKKLQRDAKSSTVSLGSSQRTSTDGFP 176
                 56677788888899999******98765899999***********************9999999999999888776655433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (619 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2141  (0.119415); expected 358.6 (0.02)
Passed bias filter:                      891  (0.049696); expected 358.6 (0.02)
Passed Vit filter:                       100  (0.00557756); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.81u 0.34s 00:00:01.15 Elapsed: 00:00:00.51
# Mc/sec: 3681.02
//
Query:       EPX70754.1  [L=200]
Description: GTPase Ypt2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.4e-67  224.2   0.1    8.7e-67  223.8   0.1    1.2  1  Ras          Ras family
    2.1e-34  118.3   0.0    3.4e-34  117.7   0.0    1.3  1  Roc          Ras of Complex, Roc, domain of DAPkinase
    1.3e-13   50.7   0.1    1.6e-13   50.5   0.1    1.1  1  Arf          ADP-ribosylation factor family
    8.5e-05   22.5   0.2       0.26   11.2   0.0    2.2  2  RsgA_GTPase  RsgA GTPase
    0.00021   20.7   0.0    0.00025   20.5   0.0    1.2  1  Gtr1_RagA    Gtr1/RagA G protein conserved region
    0.00047   20.2   0.0    0.00082   19.4   0.0    1.4  1  MMR_HSR1     50S ribosome-binding GTPase
    0.00058   19.5   0.1      0.002   17.7   0.0    1.8  2  GTP_EFTU     Elongation factor Tu GTP binding domain
     0.0087   15.5   0.1      0.011   15.2   0.1    1.2  1  SRPRB        Signal recognition particle receptor beta subuni
  ------ inclusion threshold ------
      0.052   13.1   0.0        2.6    7.5   0.0    2.1  2  FeoB_N       Ferrous iron transport protein B
      0.054   13.2   0.1       0.14   11.9   0.1    1.7  1  AAA_29       P-loop containing region of AAA domain
      0.056   13.8   0.0      0.073   13.4   0.0    1.5  1  AAA_16       AAA ATPase domain
      0.068   13.6   0.1        2.5    8.5   0.0    2.3  2  AAA          ATPase family associated with various cellular a
      0.069   12.2   0.0       0.26   10.4   0.0    1.8  2  MCM          MCM P-loop domain
       0.14   12.2   0.0       0.23   11.5   0.0    1.4  1  AAA_5        AAA domain (dynein-related subfamily)
       0.15   11.8   0.8       0.45   10.2   0.3    2.1  2  DUF4325      STAS-like domain of unknown function (DUF4325)


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  223.8   0.1   7.3e-70   8.7e-67       1     161 [.      11     171 ..      11     172 .. 0.99

  Alignments for each domain:
  == domain 1  score: 223.8 bits;  conditional E-value: 7.3e-70
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeikr 99 
                 Kl+l+Gds+vGK++lllrf +d+F+ ++++Tig+df++++ie+dgk++kl+iwDTAGqe+f++++++yyr+a+gill+yd+t+++sf+n++ w++++++
  EPX70754.1  11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNIRIWFSNVEQ 109
                 89************************************************************************************************* PP

                 HSTTTSEEEEEEETTTGGGG-SS-HHHHHHHHHHHTSEEEEEBTTTTCTHHHHHHHHHHHHH CS
         Ras 100 vaeenvpivLvGnKvDleekravsteegeelakelglkfletSAktnenveeafeellreil 161
                 +a+env  +LvGnK+D e++r+vs+e+g++la+elg++fle+SAktn nveeaf +l+rei+
  EPX70754.1 110 HASENVYKILVGNKCDCEDQRQVSFEQGKALADELGVRFLEASAKTNVNVEEAFFTLAREIK 171
                 ***********************************************************997 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.7   0.0   2.8e-37   3.4e-34       1     119 [.      11     125 ..      11     126 .. 0.91

  Alignments for each domain:
  == domain 1  score: 117.7 bits;  conditional E-value: 2.8e-37
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE...GHHHHCHH CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd...srssenlk 96 
                 K++l+GdsgvGK++ll rf ed+f+++  +tig+df+ +++ +++g       k++kl+iWDtaGqerfr++++ y+r+a  ++l+yd   ++s++n++
  EPX70754.1  11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTI-ELDG-------KRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDvtdKKSFDNIR 101
                 89**********************************98876.4444.......689*****************************99976566889*** PP

                 HHHHHHHHHCSSS-.EEEEEE-TT CS
         Roc  97 eWlkelkkvagksp.vilvgnkiD 119
                  W+++++++a++++  ilvgnk+D
  EPX70754.1 102 IWFSNVEQHASENVyKILVGNKCD 125
                 *********99885269******9 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.5   0.1   1.3e-16   1.6e-13      12     134 ..       7     133 ..       1     171 [. 0.80

  Alignments for each domain:
  == domain 1  score: 50.5 bits;  conditional E-value: 1.3e-16
                 TTEEEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSS..EEEEEEEE..TTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHHHH CS
         Arf  12 kkelrilllGLDnaGKtTilkklkleelvt.tvPTig..fnveelei..knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLk 105
                 +  +++ll+G  + GK+ +l ++++++++   + Tig  f+++++e   k +k+++wD  Gqe+ R +   Y++   +++ + D++d++ +++ +  ++
  EPX70754.1   7 DYLIKLLLIGDSGVGKSCLLLRFSEDSFTPsFITTIGidFKIRTIELdgKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNIRIWFS 105
                 55689*********************9987456666533788888876699*********************************************999 PP

                 HHCTSGCCTTSEEEEEEE-TTSTTSS-HH CS
         Arf 106 alleeeelkevallvlaNKqDlpealsee 134
                 ++ e++  ++v  ++++NK D +++ + +
  EPX70754.1 106 NV-EQHASENVYKILVGNKCDCEDQRQVS 133
                 97.5667789999999*****99876543 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0   0.00022      0.26     103     119 ..      13      29 ..       9      53 .. 0.88
   2 !    9.5   0.1    0.0007      0.84      43      99 ..     111     168 ..      87     173 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00022
                  EEECSTTSSHHHHHHHH CS
  RsgA_GTPase 103 vlvGqSGvGKStLinal 119
                  +l+G SGvGKS L+ ++
   EPX70754.1  13 LLIGDSGVGKSCLLLRF 29 
                  69***********8665 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.0007
                  HHTT-EEEEEEE-GGG--HHH.HHHHHHHHHHHTTSEEEE--TTTHTTHHHHHHHCTT CS
  RsgA_GTPase  43 eekgiepvivlnKiDlleeee.eleelkeelealgyevllvsaktkegleelkellkd 99 
                   ++++  ++v nK+D+ ++++ ++e+ k+   +lg+++l  sakt+ ++ee    l+ 
   EPX70754.1 111 ASENVYKILVGNKCDCEDQRQvSFEQGKALADELGVRFLEASAKTNVNVEEAFFTLAR 168
                  567888999*********99989999*******************9999987666665 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   2.1e-07   0.00025       1      87 [.      11      92 ..      11     163 .. 0.67

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 2.1e-07
   Gtr1_RagA  1 kvLLmGksgsGKtsmrsiiF.dnylardtlrlgatidveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDve 87
                k+LL+G sg GK+++      d +++  ++++g+  +++  e+   + ++l++wD  Gqe+f + +  +     +r    ++ + Dv+
  EPX70754.1 11 KLLLIGDSGVGKSCLLLRFSeDSFTPSFITTIGIDFKIRTIEL-DGKRIKLQIWDTAGQERFRTITTAY-----YRGAMGILLLYDVT 92
                89************98664314566777777777777766666.36789************98765333.....33333344455555 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   6.8e-07   0.00082       2     100 ..      12     107 ..      11     123 .. 0.66

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 6.8e-07
                 EEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEETT..EEEEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEETT.TTCSHHHHHHH CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvklkg..keielvDtpGliegaseekglgkaflaleeadlillvvdas.eeklkpldeel 97 
                  +++G + vGKS L+ + +++    s +    +d + ++++l+g   +++++Dt+G  e   + + ++ a+ +   a  ill+ d++ ++++++++  +
  EPX70754.1  12 LLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGkrIKLQIWDTAG-QE---RFRTITTAYYR--GAMGILLLYDVTdKKSFDNIRIWF 104
                 579****************9977777777777777777777666346789******.44...23355555553..478999999977534555555444 PP

                 HHH CS
    MMR_HSR1  98 eel 100
                  ++
  EPX70754.1 105 SNV 107
                 444 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       1.6   1.9e+03       5      20 ..      11      26 ..       9      33 .. 0.82
   2 !   17.7   0.0   1.6e-06     0.002      53     136 ..      43     130 ..      40     183 .. 0.71

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.6
                EEEEEESTTSSHHHHH CS
    GTP_EFTU  5 nigiighvDhGKtTLt 20
                ++ +ig+   GK++L+
  EPX70754.1 11 KLLLIGDSGVGKSCLL 26
                57789999*****997 PP

  == domain 2  score: 17.7 bits;  conditional E-value: 1.6e-06
                 TSCSSCEEEEEETTCSSEEEEEEEESSSGGGHHHHHHHHHT-SEEEEEEETTTBSTHHHHHHH....HHHHHTTTEEEEEEESCGST..H CS
    GTP_EFTU  53 giTiksaaisleketkkylinliDtPGHvdFskevirglrvlDgavlvvdaveGvepqteevl....rlalkegvpiivfiNKmDrl..k 136
                 gi  k+ +i+l+  +k+ ++++ Dt G + F   +++ +r + g +l+ d+++       +++    ++  +e+v  i++ NK+D    +
  EPX70754.1  43 GIDFKIRTIELD--GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNIRIWfsnvEQHASENVYKILVGNKCDCEdqR 130
                 555667777777..**************************************998777776652222677778888*********88432 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.1   9.1e-06     0.011       6     142 ..      12     145 ..       8     188 .. 0.72

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 9.1e-06
                 EEEE-STTSSHHHHHHHHHHSS---B---S.S-EEETTG.....GGTT-SEEEETT-GCCSHHHHHHHHHHGGEEEEEEEEETTS-HHHHHHHHHHHHH CS
       SRPRB   6 vllvGlsdsGKTslftrLttdsvkktvtSq.essaalkv..ksekgskltliDfPGheklrqklleklkaksslkglvfvvDStidpkevkevAEllye 101
                 +ll+G s  GK  l+ r ++ds++++ +      +  ++   + k  kl++ D  G+e++r+  +    + + + g++ + D t d+k   ++  ++ +
  EPX70754.1  12 LLLIGDSGVGKSCLLLRFSEDSFTPSFITTiGIDFKIRTieLDGKRIKLQIWDTAGQERFRTITTA---YYRGAMGILLLYDVT-DKKSFDNIRIWFSN 106
                 79********************999876654445555442346677889999*********85443...578899999999976.88888888888888 PP

                 HHHHHHHHTT---EEEEEE-TTSTT---HHHHH.HHHHHHHH CS
       SRPRB 102 illiteklkdavdiliACnKqelflakspklik.daLEkEln 142
                 +  +    ++  +il+  nK +    ++ +  + +aL  El+
  EPX70754.1 107 VEQHAS--ENVYKILVG-NKCDCEDQRQVSFEQgKALADELG 145
                 765544..777777774.777777666666555235666665 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0     0.035        42       2      50 ..      11      59 ..      10      77 .. 0.75
   2 ?    7.5   0.0    0.0022       2.6     106     151 ..     115     161 ..      98     166 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.035
                EEEEEESTTSSHHHHHHHHHTTSEEEEESTTSSSEEEEEEEEETTEEEE CS
      FeoB_N  2 tvalvGnpnvGkttlfnaltgakqkvgNwpGvtvekkegklklkgkeve 50
                ++ l+G+  vGk+ l+ + ++ + + +  + + ++ k  +++l+gk+++
  EPX70754.1 11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIK 59
                6789***********9999988888777777777777777777665543 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0022
                 SSEEEEEETHHHHHHTTEEE-H.HHHHHHHTS-EEEEBTTTTBTHHH CS
      FeoB_N 106 vpvvlalnmideaekkgieidl.kkLsekLgvpvvktsakkkegiee 151
                 v  +l+ n++d  ++++++ ++ k+L+++Lgv  +++sak++ ++ee
  EPX70754.1 115 VYKILVGNKCDCEDQRQVSFEQgKALADELGVRFLEASAKTNVNVEE 161
                 55688899**********9987478*****************99997 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   0.00012      0.14      25      39 ..      12      26 ..       4      27 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00012
      AAA_29 25 tlltGpsGsGKSTll 39
                 ll+G+sG+GKS ll
  EPX70754.1 12 LLLIGDSGVGKSCLL 26
                69**********997 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   6.1e-05     0.073      27      51 ..      12      36 ..      11     182 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 6.1e-05
      AAA_16 27 vllsGesGvGKsslvrellralekd 51
                +ll+G+sGvGKs l+ ++ +   + 
  EPX70754.1 12 LLLIGDSGVGKSCLLLRFSEDSFTP 36
                79*************9988744444 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.0    0.0021       2.5       1      64 [.      12      88 ..      12     121 .. 0.77
   2 ?    3.0   0.0      0.11   1.3e+02      16      35 ..     138     157 ..     136     182 .. 0.79

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0021
                EEEESSTTSSHHHHHHHHHHHH.............THEEEEEETTTCS.SSSTTHHHHHHHHHHHHHHHTSTSEEEEE CS
         AAA  1 vllyGppGtGKTllakavakel.............gvefleisgsell.skyvgesekkirelfkeakekakpsilfi 64
                +ll+G  G+GK+ l     +++             +++ +e++g+++  + +  ++++++r + ++  + a   il++
  EPX70754.1 12 LLLIGDSGVGKSCLLLRFSEDSftpsfittigidfKIRTIELDGKRIKlQIWDTAGQERFRTITTAYYRGA-MGILLL 88
                69*************99999954444445555544788999999999966677788888888887776666.666665 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.11
                 HHHHHHHTHEEEEEETTTCS CS
         AAA  16 kavakelgvefleisgsell 35 
                 ka+a elgv+fle s+++ +
  EPX70754.1 138 KALADELGVRFLEASAKTNV 157
                 89*************99877 PP

>> MCM  MCM P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00022      0.26      58      79 ..      10      31 ..       2      45 .. 0.77
   2 ?   -1.0   0.0      0.63   7.5e+02      51      71 ..      76      96 ..      58     123 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00022
                -EEEEEESSTSTHHHHHHHHHH CS
         MCM 58 invllvgdpgtaKsqlLkyvek 79
                i++ll+gd+g++Ks lL + ++
  EPX70754.1 10 IKLLLIGDSGVGKSCLLLRFSE 31
                899***********99876654 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.63
                SSBBCSS-EEEEEESSTSTHH CS
         MCM 51 ktklrgdinvllvgdpgtaKs 71
                 + +rg + +ll+ d+   Ks
  EPX70754.1 76 TAYYRGAMGILLLYDVTDKKS 96
                356899999999999988887 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00019      0.23       2      21 ..      12      31 ..      11      57 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00019
                EEEE--SSSSHHHHHHHGGG CS
       AAA_5  2 vlLvGppGtgKselaerlaa 21
                +lL+G++G+gKs l  r+++
  EPX70754.1 12 LLLIGDSGVGKSCLLLRFSE 31
                89*************99997 PP

>> DUF4325  STAS-like domain of unknown function (DUF4325)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       2.7   3.2e+03      15      28 ..      95     108 ..      88     112 .. 0.74
   2 ?   10.2   0.3   0.00038      0.45      36      64 ..     160     188 ..     159     189 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 2.7
     DUF4325  15 kegekvelDFdgve 28 
                 k+++++ + F++ve
  EPX70754.1  95 KSFDNIRIWFSNVE 108
                 56888888888887 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00038
     DUF4325  36 deaFgglirefgeeeiskklkiknlnepv 64 
                 +eaF  l+re++ ++i+ ++++ n  ++v
  EPX70754.1 160 EEAFFTLAREIKKQKIDAEHEFNNQGNNV 188
                 8***********************98876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       749  (0.0417759); expected 358.6 (0.02)
Passed bias filter:                      527  (0.0293937); expected 358.6 (0.02)
Passed Vit filter:                        68  (0.00379274); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.44u 0.30s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 1369.24
//
Query:       EPX70755.1  [L=512]
Description: threonine synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      3e-30  104.3   0.0    6.4e-30  103.2   0.0    1.6  1  Thr_synth_N  Threonine synthase N terminus
    1.4e-15   57.5   0.0    3.1e-15   56.4   0.0    1.5  1  PALP         Pyridoxal-phosphate dependent enzyme


Domain annotation for each model (and alignments):
>> Thr_synth_N  Threonine synthase N terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.2   0.0   7.1e-34   6.4e-30       1      79 []       6      85 ..       6      85 .. 0.99

  Alignments for each domain:
  == domain 1  score: 103.2 bits;  conditional E-value: 7.1e-34
  Thr_synth_N  1 kYiSTRgeaeklsfeeallkGlAeDgGLyvPeeiPklsaeeleelrklsYaelafevlklfi.edeipeedLkeliekaY 79
                 +Y+STRg++++lsfe+a+lkGlA+DgGL++P+eiP++ ++++e++++ s++e+afe+++l++ ++eip++ Lk++i+++Y
   EPX70755.1  6 TYLSTRGGSSNLSFEDAVLKGLASDGGLFIPNEIPQFPKNWVEDWKNKSFSEVAFEIMSLYVpREEIPADALKDIIKRSY 85
                 5******************************************************************************9 PP

>> PALP  Pyridoxal-phosphate dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.4   0.0   3.5e-19   3.1e-15      30     274 ..     108     430 ..      93     447 .. 0.84

  Alignments for each domain:
  == domain 1  score: 56.4 bits;  conditional E-value: 3.5e-19
                 GGS.TTSBTTHHHHHHHHHH....HHTT........TTTSEEEEEBSSHHHHHHHHHHHHH.T-EEEEEEETTS-H..HHHHHHHHTT-EEEEE..CCH CS
        PALP  30 sln.ptgSfKdRgaeyllar....lkeg........tgaktvveassGNhgralAaaaall.Glkvtivvpadasp..ekvallrllGaevvev..ggd 110
                  ++ pt +fKd ++++l       l+++        ++  tvv a+sG++g a+++  +    + v i++p++  +  + ++++  l  +v+ v  +g 
  EPX70755.1 108 LFHgPTFAFKDVALQFLGNLfeffLTRKngdkpvdqRDHLTVVGATSGDTGSAAIYGLRGKkDVSVFILFPKGRISpiQEAQMTSVLDKNVHNVivDGV 206
                 44549**********5555555584444458888888**********************7769*********9884459999999999*****999*** PP

                 HHHHHHHHHHHHHH..STTCEE--TTTSHHHHHH.HHTHHHHHH.....HHTT.TTEE..EEEEE-SSSHHHHHHHHHHHHHSTT-EEEEEEECTTCGG CS
        PALP 111 ydeavaaaaelaae..gegaylvsqfdnptvieg.ygtiglEil.....eqlg.gkpd..avvvpvGgGgliaGiaaglkerrpdvrvigvepegsdal 198
                 +d+++++++++  +   ++ +++    n+ +++   ++i + ++        + gk d   +vvp+G+ g i + + + + + p  +++++ + ++d l
  EPX70755.1 207 FDDCQDIVKQVFGDveFNKKHHIGAV-NSINWARiLSQITYYVYaylltV--KaGKADqvRFVVPTGNFGDILAGYYAKRMGVPADKLVIATN-ENDIL 301
                 *********99999887888888888.78888888999999997545332..255666445********************9**988888855.5**** PP

                 TTCCS..S.SS..B....................................................SSS.CCSTCS...CGTTCCHHHHSEEEEEEEEE CS
        PALP 199 arslragrrvtvpvs...................................................dtiadglavg...spselafelldrlvdeivtv 243
                 +r+++ gr+++v++s                                                     +++  + +   ++ ++++e ++r       v
  EPX70755.1 302 NRFFKSGRYEKVDSSvapanssasaketyspamdilvssnferylwylaltceapnhthaeaseilAKWMSEFKQNgsvAVRPEVLETARRDFI-SERV 399
                 ********************************************************99999998886666666666666666777777766555.799* PP

                 EHHHHHHHHHHHHHHHSB-B-HHHHHHHHHH CS
        PALP 244 sdeealeamrllarregivvepssaaalaal 274
                 s++e+++ ++  +++e +v++p++a+++   
  EPX70755.1 400 SNDETIASIKSIYETEQYVIDPHTAVGIETG 430
                 **************************98876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (512 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       545  (0.0303977); expected 358.6 (0.02)
Passed bias filter:                      495  (0.0276089); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.29s 00:00:00.87 Elapsed: 00:00:00.45
# Mc/sec: 3411.31
//
Query:       EPX70756.1  [L=309]
Description: hypothetical protein SOCG_04201 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.055   12.3   9.4      0.079   11.8   9.4    1.2  1  Nucleo_P87  Nucleopolyhedrovirus capsid protein P87


Domain annotation for each model (and alignments):
>> Nucleo_P87  Nucleopolyhedrovirus capsid protein P87
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   9.4   4.4e-06     0.079     288     436 ..     109     289 ..      93     304 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 4.4e-06
  Nucleo_P87 288 wrakntpmaeqslqspaqtpaperslqsPeqtparrkstkmteeslqsPaqtpawqtpattptretssdteaiksepektleeklreklp.....sdls 381
                 +++++ +  + s  sp+q p p  s ++ ++ p + + +    +s+  P+ +   ++  + p+  t+ + e   + p+ +l+++lr++ p     +dls
  EPX70756.1 109 FNVQSKHPLPLSASSPKQVPLPASSPPHFSSSPSSPIPMSSVTTSSMHPPSSSRLSSRSSFPKDATTRQLERFVPIPHGNLKKRLRQRPPrknddLDLS 207
                 34444345567899999**99999999999999888888888888888888888899999********************************9997777 PP

  Nucleo_P87 382 aqssvpdkk.......seasavlptekrkRrrarklqels......................sdededssdekevDkekerkRR 436
                    s+p+++       se+s+ l  ++ kR ++ + q  s                       ++d ++s++ke  +e+++kR 
  EPX70756.1 208 VLHSIPNSSppssaseSEESQLL-WKRSKRTKVARRQSDSsftldnenleptgddnkhssdgTSDD-EDSEKKELLDEEQQKRM 289
                 76666665411111112333333.455566555554433358888999988877777665542222.24555555555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (309 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1211  (0.0675442); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 2279.13
//
Query:       EPX70757.1  [L=188]
Description: bcap family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.4e-40  136.4   3.6      7e-40  136.0   3.6    1.1  1  Bap31          Bap31/Bap29 transmembrane region
    0.00038   20.4  11.9    0.00054   19.9  11.9    1.2  1  Bap31_Bap29_C  Bap31/Bap29 cytoplasmic coiled-coil domain
  ------ inclusion threshold ------
      0.017   15.2   1.6      0.033   14.3   1.6    1.4  1  UPF0242        Uncharacterised protein family (UPF0242) N-ter
      0.025   14.2   7.5      0.036   13.7   7.5    1.1  1  YkyA           Putative cell-wall binding lipoprotein
      0.031   13.2   4.8       0.04   12.8   4.8    1.1  1  Spc7           Spc7 kinetochore protein
      0.071   13.6   0.9       0.11   12.9   0.9    1.4  1  NPV_P10        Nucleopolyhedrovirus P10 protein


Domain annotation for each model (and alignments):
>> Bap31  Bap31/Bap29 transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.0   3.6   2.3e-43     7e-40       1     134 [.       1     136 [.       1     137 [. 0.98

  Alignments for each domain:
  == domain 1  score: 136.0 bits;  conditional E-value: 2.3e-43
       Bap31   1 msLqytlvaalLvaeivvvllLvlPlpsavrkklfksllvsklsaklqialkillifllllflDavrrvrkvseeeeea..aaklkleaesevqarkFy 97 
                 m+++y++v++lL++eiv +++L+lPlp +vrk+++++++ s+++ k++ +lki++i++l+lf D+vrrv ++++e e +  aa   ++a+  ++a +Fy
  EPX70757.1   1 MTIYYMIVFILLMLEIVSFVILSLPLPLKVRKAILNTISHSPIAGKIEHTLKIMIICILILFSDSVRRVVRMNTEFEMSgiAAGSVENARAGFKAGQFY 99 
                 9****************************************************************************9999889999************ PP

       Bap31  98 aQRNlYlsGftLfLslvlrrlvtliselakleaklea 134
                 aQRNlYl+G +LfLslv++r++  +++l+++e+klea
  EPX70757.1 100 AQRNLYLCGSALFLSLVVNRYYLSLKSLIATEEKLEA 136
                 **********************************997 PP

>> Bap31_Bap29_C  Bap31/Bap29 cytoplasmic coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9  11.9   1.8e-07   0.00054       1      49 [.     132     187 ..     132     188 .] 0.94

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 1.8e-07
  Bap31_Bap29_C   1 keiekLkkeLkkkk......kDlealKkQaeglakEYDrLadehskl.desedKKd 49 
                    +++e+L++e k++k       +l++l+++ e+  kEY  Lad++++  +  e+KKd
     EPX70757.1 132 EKLEALQTEVKASKsdskslEELDTLRSKLESRDKEYATLADKYAEAtKTLEKKKD 187
                    5799*******99999*******************************988888988 PP

>> UPF0242  Uncharacterised protein family (UPF0242) N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   1.6   1.1e-05     0.033      48     116 ..     111     186 ..      98     187 .. 0.71

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.1e-05
     UPF0242  48 Llllllllkwekalkekl......ekskleekeaklteld.eglktkeealeelqeeeeeLkeeldakeeelerlk 116
                 L+l l++ +++  lk  +      e+ ++e k +k  +++ e+l+t + +le + +e   L++++++ +++le+ k
  EPX70757.1 111 LFLSLVVNRYYLSLKSLIateeklEALQTEVKASKSDSKSlEELDTLRSKLESRDKEYATLADKYAEATKTLEKKK 186
                 333344445555555544544333666666666666666699****************************999876 PP

>> YkyA  Putative cell-wall binding lipoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   7.5   1.2e-05     0.036      75     129 ..     125     180 ..     119     185 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.2e-05
        YkyA  75 esieeakeefekikeeieeie.deelkkeaeelieameeryeaydklykaYkeale 129
                 +s+ +++e++e +++e++  + d++  +e+++l +++e+r + y +l ++Y ea++
  EPX70757.1 125 KSLIATEEKLEALQTEVKASKsDSKSLEELDTLRSKLESRDKEYATLADKYAEATK 180
                 6788999**********9996599*****************************985 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   4.8   1.3e-05      0.04     178     233 ..     129     186 ..     116     188 .] 0.66

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.3e-05
        Spc7 178 eleeeleklqeaaeeles..idkeeLeelreelaelkaeieekkkelaelqeqleele 233
                 + ee+le lq++++  +s     eeL +lr++l++ ++e++ + +++ae ++ le+++
  EPX70757.1 129 ATEEKLEALQTEVKASKSdsKSLEELDTLRSKLESRDKEYATLADKYAEATKTLEKKK 186
                 4566677777744443332133677778888888888888888888888888887765 PP

>> NPV_P10  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.9   3.8e-05      0.11      15      66 ..     129     183 ..     122     188 .] 0.77

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 3.8e-05
     NPV_P10  15 avddkVdalqqqvddvqenlpdvte...lnekLdaqsaqLaeletkvenIqdiLn 66 
                 a+++k++alq++v+  +++++ ++e   l +kL++  ++ a+l +k  + +++L 
  EPX70757.1 129 ATEEKLEALQTEVKASKSDSKSLEEldtLRSKLESRDKEYATLADKYAEATKTLE 183
                 7899*********999988887766111567999999999999888777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (188 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1529  (0.0852808); expected 358.6 (0.02)
Passed bias filter:                      678  (0.0378158); expected 358.6 (0.02)
Passed Vit filter:                        78  (0.00435049); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.44u 0.28s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 1316.03
//
Query:       EPX70758.1  [L=756]
Description: 3-isopropylmalate dehydratase Leu2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   7.5e-158  526.3   0.0   9.2e-158  526.0   0.0    1.1  1  Aconitase    Aconitase family (aconitate hydratase)
    2.3e-38  131.5   0.0    4.4e-38  130.6   0.0    1.5  1  Aconitase_C  Aconitase C-terminal domain


Domain annotation for each model (and alignments):
>> Aconitase  Aconitase family (aconitate hydratase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  526.0   0.0    1e-161  9.2e-158       1     461 []      10     467 ..      10     467 .. 0.97

  Alignments for each domain:
  == domain 1  score: 526.0 bits;  conditional E-value: 1e-161
   Aconitase   1 ekiwdahlv..eeeg..iayvpdrvllqdvtgvqalvdlaaareavrrlggtlatidhlvpvdlvidhsvgaeealeknledefernkeryefLksaak 95 
                 +k++d+h+v  +e+g  ++y+ dr+l+++vt++qa+++l++a+++ rr++ +lat+dh++p+d     s ++ + le+ ++++ +r  +++ +L+++ k
  EPX70758.1  10 DKVFDSHVVdsQEDGtcLLYI-DRHLIHEVTSPQAFEGLRTAGRKARRPELALATVDHNIPTD-----SRKDLKDLESFIHQPDSR--TQVLALEHNIK 100
                 699****99543455778888.*****************************************.....55555669999*999999..*********** PP

   Aconitase  96 afgirvvppg...qGIvHqvnlEyglalpgktvvgtDSHTtmigglGvlaiGvGgieaeavllgqplelkipkvvgvkltGklkegvtakDlvlavigk 191
                 +fg++++ +    qGIvH++++E+g++lp +t+v++DSHT+++g++G+la+G+G++e+e+vl++q++ +++ k+++++++G+l+eg+ +kDl+l++ig 
  EPX70758.1 101 EFGLSYFGMTdrrQGIVHVIGPEQGFTLPATTLVCGDSHTSTHGAFGALAFGIGTSEVEHVLATQTILQRKSKNMRIHVSGTLPEGIASKDLMLHIIGV 199
                 *****99999999************************************************************************************** PP

   Aconitase 192 lrkkgvvgkvvEffGegvesLsledraTiaNMaaEvGAttglfpvdektleYLkatgreeaavlveaydkaqalf.elaadedaeydkvleldlstlep 289
                 ++++g++g+v+Ef+Ge++e+Ls+e+r++++NM++E+GA++g++++de+t+eY+k  +r+ a+ +++++++a+a++ +l++d++a+yd ++e++++++ p
  EPX70758.1 200 IGTAGGTGCVIEFCGEAIEALSMEARMSMCNMSIEAGARAGMIAPDETTFEYVK--NRPLAP-KGDDWEQAVAYWkTLSSDKGAKYDIEVEINAADILP 295
                 ******************************************************..******.7***********88********************** PP

   Aconitase 290 svagpkrPqdavplselvk.k.efkeelekeaaekaley.klkegtklkdgkvdiaaigSCTNssnedvraaagllakavekglkvkpgv.ktsvaPGS 384
                 +v+++++Pqd+++++++v+ + ++++++++++ +++ley +l+++t+++  ++d+ +igSCTNs++ed+r+aa++++     g+k+++++ +++v+PGS
  EPX70758.1 296 TVTWGTSPQDVIAVNDTVPdPsKVTDAVRATSIQHSLEYmGLEPNTPITSYPLDKIFIGSCTNSRIEDLRLAAAVVK-----GRKIASNIkHAMVVPGS 389
                 ******************97569******************************************************.....********889****** PP

   Aconitase 385 evvkayleaeGlleiLekaGfevvgagCstCig.nsdrleegeaivsssNRNFegRqgpntrayLaSPelvvaaAlaG 461
                 + vk+ +e eGl++++ +aGf++++agCs+C+g n+d+l++ e+++s+sNRNFegRqg+++r++L+SP++++aaA++G
  EPX70758.1 390 GLVKKMAESEGLDQVFIEAGFDWREAGCSMCLGmNPDQLKPYERCASTSNRNFEGRQGAKGRTHLVSPAMAAAAAIKG 467
                 ****************************************************************************98 PP

>> Aconitase_C  Aconitase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.6   0.0   4.9e-42   4.4e-38       2     129 ..     535     655 ..     534     657 .. 0.96

  Alignments for each domain:
  == domain 1  score: 130.6 bits;  conditional E-value: 4.9e-42
                  CCCCCCTT--CHHHHSTGGGCCGHCCHHHCCCGGTTTCCCCTTTSBBSEEEETTTTEEEEHHHHHHHHHHTT--EEEE--SSBTBS---THHHHHHHH CS
  Aconitase_C   2 ekllklkGlttedeksnvdtdlkipkqfegtianiglgnelveekrankttdlddgekedvvdaaerykkegaklvviagknfGeGSSRehAAkalrl 99 
                  +k++ ++G+++++++snvdtd++ipkqf++ti+++glg+  ++e+r++++ +    e +++v++ e+y+  ga+++v+  +nfG+GSSRehA++al++
   EPX70758.1 535 PKFTVVSGIAAPLPISNVDTDKIIPKQFLKTIKRTGLGKFAFYEIRYDSDGN----ELPEFVLNREPYR--GASILVAH-ENFGCGSSREHAPWALND 625
                  689999****************************************999887....6899*********..*****999.****************** PP

                  TTEEEEEES-B-HHHHHHHHHTT-EEEEES CS
  Aconitase_C 100 lGikaviaeSFerIfennliknglLplefk 129
                  +Gi++via+SF++If nn +kng+Lp+ ++
   EPX70758.1 626 FGIRVVIAPSFADIFFNNCFKNGMLPIPLP 655
                  **************************9775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (756 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       397  (0.0221429); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.35s 00:00:00.99 Elapsed: 00:00:00.51
# Mc/sec: 4449.60
//
Query:       EPX70759.1  [L=453]
Description: transcription factor Sfp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.7e-05   22.6  17.9      0.021   15.3   1.1    3.6  3  zf-C2H2        Zinc finger, C2H2 type
    0.00099   19.3   1.8       0.51   10.7   0.2    2.6  2  zf-C2H2_jaz    Zinc-finger double-stranded RNA-binding
     0.0043   17.4  14.2       0.12   12.9   1.1    3.4  3  zf-H2C2_2      Zinc-finger double domain
  ------ inclusion threshold ------
       0.01   15.8   2.3       0.01   15.8   2.3    2.3  2  zf-C2H2_6      C2H2-type zinc finger
      0.011   16.5  19.0       0.25   12.3   2.2    3.7  3  zf-C2H2_4      C2H2-type zinc finger
      0.029   14.5  10.1        2.4    8.3   0.5    3.1  3  zf-C2H2_aberr  Aberrant zinc-finger
        2.2    8.0  11.7       0.33   10.6   0.2    3.4  3  zf_C2H2_ZHX    Zinc-fingers and homeoboxes C2H2 finger domain


Domain annotation for each model (and alignments):
>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.4     0.047   1.2e+02       6      23 .]      87     105 ..      87     105 .. 0.93
   2 !   15.3   1.1   8.2e-06     0.021       1      23 []     361     386 ..     361     386 .. 0.94
   3 !   12.6   3.8   5.9e-05      0.15       1      23 []     410     433 ..     410     433 .. 0.95

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.047
                 TTEEESSHHHHHHHHHC.C CS
     zf-C2H2   6 CgksFkrksnLkrHirt.H 23 
                 Cgk   + ++L +H+   H
  EPX70759.1  87 CGKNLDDLHQLIHHYEEqH 105
                 **************98777 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 8.2e-06
                 EEET..TTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   1 ykCp..dCgksFkrksnLkrHirt.H 23 
                 ykCp   C+k +k++  Lk H    H
  EPX70759.1 361 YKCPvpNCDKAYKNQNGLKYHKLHgH 386
                 9********************98777 PP

  == domain 3  score: 12.6 bits;  conditional E-value: 5.9e-05
                 EEETTTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                 y+C+ C+k++k+   Lk H+   H
  EPX70759.1 410 YRCDTCNKRYKNLNGLKYHRAHsH 433
                 9******************98777 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.1    0.0019       4.9       7      21 ..     368     382 ..     366     383 .. 0.91
   2 !   10.7   0.2    0.0002      0.51       2      20 ..     410     428 ..     409     430 .. 0.90

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0019
                  TTBBBSSHHHHHCCT CS
  zf-C2H2_jaz   7 CdKyFksenaldnHl 21 
                  CdK +k++n l+ H+
   EPX70759.1 368 CDKAYKNQNGLKYHK 382
                  ************995 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.0002
                  CBBTTTTBBBSSHHHHHCC CS
  zf-C2H2_jaz   2 fYCvlCdKyFksenaldnH 20 
                  + C +C+K +k+ n l+ H
   EPX70759.1 410 YRCDTCNKRYKNLNGLKYH 428
                  89**********9999998 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   1.1   4.7e-05      0.12      12      26 .]     358     374 ..     356     374 .. 0.92
   2 !   12.7   0.6   5.4e-05      0.14      13      26 .]     408     421 ..     400     421 .. 0.87
   3 ?   -1.4   0.5       1.5   3.7e+03       1      10 [.     424     434 ..     424     438 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 4.7e-05
   zf-H2C2_2  12 ekpyeCp..lCdkaFkt 26 
                 +kpy+Cp   Cdka+k+
  EPX70759.1 358 DKPYKCPvpNCDKAYKN 374
                 79******99*****97 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 5.4e-05
   zf-H2C2_2  13 kpyeCplCdkaFkt 26 
                 kpy C+ C+k++k+
  EPX70759.1 408 KPYRCDTCNKRYKN 421
                 89**********97 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 1.5
   zf-H2C2_2   1 nLrrHirk.Ht 10 
                 +L++H +  H 
  EPX70759.1 424 GLKYHRAHsHL 434
                 599**995486 PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   2.1       1.6   4.1e+03       3      21 ..     362     382 ..     361     387 .. 0.75
   2 ?   15.8   2.3   4.1e-06      0.01       2      26 ..     410     435 ..     410     436 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 1.6
   zf-C2H2_6   3 eCsv..CsksFpslqaLggHk 21 
                 +C+v  C+k ++ +  L  Hk
  EPX70759.1 362 KCPVpnCDKAYKNQNGLKYHK 382
                 555555999999999998888 PP

  == domain 2  score: 15.8 bits;  conditional E-value: 4.1e-06
   zf-C2H2_6   2 heCsvCsksFpslqaLggHkks.Hrk 26 
                 ++C++C+k+++ l  L  H+++ H +
  EPX70759.1 410 YRCDTCNKRYKNLNGLKYHRAHsHLQ 435
                 9*******************998975 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   3.0     0.075   1.9e+02       6      24 .]      87     105 ..      80     105 .. 0.81
   2 ?   10.0   0.4   0.00052       1.3       1      20 [.     361     382 ..     361     384 .. 0.92
   3 ?   12.3   2.2   9.6e-05      0.25       1      24 []     410     433 ..     410     433 .. 0.92

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.075
   zf-C2H2_4   6 CgksFsskkaLlrHlkthH 24 
                 Cgk+  + ++L +H + +H
  EPX70759.1  87 CGKNLDDLHQLIHHYEEQH 105
                 8999999999999988877 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00052
   zf-C2H2_4   1 fkCpi..CgksFsskkaLlrHl 20 
                 +kCp+  C+k ++++++L+ H 
  EPX70759.1 361 YKCPVpnCDKAYKNQNGLKYHK 382
                 89*******************5 PP

  == domain 3  score: 12.3 bits;  conditional E-value: 9.6e-05
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlkthH 24 
                 ++C+ C+k++++ ++L+ H +  H
  EPX70759.1 410 YRCDTCNKRYKNLNGLKYHRAHSH 433
                 89*****************87766 PP

>> zf-C2H2_aberr  Aberrant zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.2     0.021        54      20     101 ..      61     150 ..      52     165 .. 0.64
   2 ?    8.3   0.5   0.00093       2.4     141     162 ..     361     382 ..     351     388 .. 0.84
   3 ?    7.4   0.4    0.0017       4.3     146     163 ..     413     430 ..     409     440 .. 0.81

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.021
  zf-C2H2_aberr  20 rhlveykhslytnse.fslkCpvrkCsesivelentelleehlekeha........akllellkelei.eikkteetekvnykgkivelkke 101
                    +h    + s  +++   +  C   +C  +  +l+ +  l +h e +ha         + l+  ++ ++ +  + ++t+ ++++++i  +   
     EPX70759.1  61 QHRPSDDFSTMYPNRlEEAFCRNFNC--CGKNLDDLHQLIHHYEEQHAvlpsdvnlSSSLDNSNSATVaNHLNRNNTQALKQRERIRMHDLA 150
                    55566667766666657888999999..457999*************977777544333333333333033455556666666655555544 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00093
  zf-C2H2_aberr 141 iyCripGCgkrfkslmaYkYhc 162
                    + C++p C+k +k+  + kYh 
     EPX70759.1 361 YKCPVPNCDKAYKNQNGLKYHK 382
                    4699999999999999999994 PP

  == domain 3  score: 7.4 bits;  conditional E-value: 0.0017
  zf-C2H2_aberr 146 pGCgkrfkslmaYkYhck 163
                      C+kr+k+l + kYh  
     EPX70759.1 413 DTCNKRYKNLNGLKYHRA 430
                    67**************64 PP

>> zf_C2H2_ZHX  Zinc-fingers and homeoboxes C2H2 finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   1.4      0.19   4.9e+02      10      46 ..      87     126 ..      83     130 .. 0.84
   2 ?    2.0   0.2     0.062   1.6e+02       9      32 ..     367     390 ..     360     394 .. 0.87
   3 ?   10.6   0.2   0.00013      0.33       5      29 ..     410     434 ..     406     448 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.19
  zf_C2H2_ZHX  10 CsfsakkfegLalHNarsHp...getnftlqvvKrdnqti 46 
                  C+ +  +  +L +H  + H+   +  n++ ++   ++ t+
   EPX70759.1  87 CGKNLDDLHQLIHHYEEQHAvlpSDVNLSSSLDNSNSATV 126
                  7778888899*********988899999998888888876 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.062
  zf_C2H2_ZHX   9 eCsfsakkfegLalHNarsHpget 32 
                  +C+   k+ +gL+ H  + H + +
   EPX70759.1 367 NCDKAYKNQNGLKYHKLHGHCSPI 390
                  69999************9998865 PP

  == domain 3  score: 10.6 bits;  conditional E-value: 0.00013
  zf_C2H2_ZHX   5 FvCveCsfsakkfegLalHNarsHp 29 
                  + C  C+   k+ +gL+ H a+sH 
   EPX70759.1 410 YRCDTCNKRYKNLNGLKYHRAHSHL 434
                  89**********************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (453 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       643  (0.0358637); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.68u 0.29s 00:00:00.97 Elapsed: 00:00:00.54
# Mc/sec: 2530.70
//
Query:       EPX70760.1  [L=634]
Description: tRNA dihydrouridine synthase Dus3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.1e-36  125.6   0.0      5e-35  121.1   0.0    2.3  1  Dus              Dihydrouridine synthase (Dus)
  ------ inclusion threshold ------
      0.084   13.3   4.2        2.3    8.7   0.2    2.6  2  Lustrin_cystein  Lustrin, cysteine-rich repeated domain
       0.46   10.3   4.5       0.18   11.7   0.2    2.3  2  zf-CCCH_4        CCCH-type zinc finger
          4    7.5   6.6         17    5.4   0.3    2.6  2  zf-CCCH          Zinc finger C-x8-C-x5-C-x3-H type (and simil


Domain annotation for each model (and alignments):
>> Dus  Dihydrouridine synthase (Dus)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.1   0.0   1.1e-38     5e-35       1     253 [.     259     536 ..     259     564 .. 0.81

  Alignments for each domain:
  == domain 1  score: 121.1 bits;  conditional E-value: 1.1e-38
                 EE---TTTS-HHHHHHHHHTT-SSEEEEEEEE-SSS---HHHHHHH-GGGGGT.........SCEEEEEE-S-HHHHHHHHHHHHH..TT-SCEEEEES CS
         Dus   1 llaPmagvtdlpfRelvrefgataLvvtemvtakaivreekvrirmlseeeee.........tplavQlggsdpallaeaAklvad..lgadeIdlNvG 88 
                 +laP+  v + pfR+l+  +ga+   +tem   + +++ ++ ++  +   ++e           l +Ql+ s+  + ++ A++  +   g+d  dlN+G
  EPX70760.1 259 ILAPLTTVGNPPFRRLCGSLGAD-TFYTEMAMCHPLMQGHQPEWALVRGINTEremmpsgrkGILGIQLACSKLWQGVKTAQVISEncDGVDFLDLNCG 356
                 59*********************.9**********999988888777766666667889988899********9999999998877466777779**** PP

                 STTEEETTEEEGGGGGGSHHHHHHHHHHHHCCSS.S-EEEEEESESSTTTC.HHHHHHHHHHCT.-SEEEEESSECCCTT-CG--CHHHHHHHHH-S.. CS
         Dus  89 CPskkvtrggaGaaLlrkpdlvaqivkavvkave.iPvtvkirigiddeeenalelakiveaaG.aqaltvHgRtraqnyegtadweaIkevkqavs.. 183
                 CP++ v r+gaG++Ll+ p  + + ++ +    + iP tvk r+g ++++    +l  ++ ++    a ++HgR+r+q+y++ a+we +k+   +v+  
  EPX70760.1 357 CPIDLVFRQGAGSSLLESPSRLIRNLQGIDAISGtIPTTVKLRTGNREDHPVVNRLLSRIHQETnTSAAVLHGRSRQQRYSKLANWEYVKDCASNVRgl 455
                 **************************999877779***************999999888877764889999******************9988777554 PP

                 ................S-EEEESS--SHHHHHHHHHHH--SEEEESCHHCCSTTHHHHHHHHHHSC------HHHHHHHHHHHHHH CS
         Dus 184 ................ipviaNGdIkdaedaqaileetGadgvmigrgalgnPwlfaestavktgeaepapplaeeaeiveehlkk 253
                                   +i+NGd++++ed  + ++  G+d +m++rgal +Pw+f+e   +++ +++++ +  +++ei++e  ++
  EPX70760.1 456 negiddlpegslrtqpMAFIGNGDCYSWEDWYEGMDT-GVDTIMVARGALVKPWIFEEI-DARQ-YIDKSST--QRLEILQEYCNN 536
                 4442232222233334579****************98.******************953.3344.3333333..345555554444 PP

>> Lustrin_cystein  Lustrin, cysteine-rich repeated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.3    0.0051        23      22      41 ..      52      73 ..      41      74 .. 0.79
   2 ?    8.7   0.2   0.00052       2.3      19      34 ..      85     102 ..      71     110 .. 0.74

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0051
  Lustrin_cystein 22 s..sssCPsgysChfssttess 41
                        +++CP++  C+f+++ e +
       EPX70760.1 52 IsvGKECPFQNNCKFGHDVEVY 73
                     456799*********9987765 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00052
  Lustrin_cystein  19 Csps..sssCPsgysChf 34 
                      C ++     CP+gy+C++
       EPX70760.1  85 CVNFetYGVCPAGYKCRW 102
                      655556678*******76 PP

>> zf-CCCH_4  CCCH-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.2     4e-05      0.18       2      22 .]      48      69 ..      47      69 .. 0.95
   2 ?   -0.7   0.5      0.29   1.3e+03      11      18 ..      94     101 ..      91     103 .. 0.54

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 4e-05
   zf-CCCH_4  2 lCpyfakG.sCrfGdnCrFsHd 22
                lCp + +G  C f +nC+F Hd
  EPX70760.1 48 LCPAISVGkECPFQNNCKFGHD 69
                8********************9 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.29
   zf-CCCH_4  11 CrfGdnCr 18 
                 C  G +Cr
  EPX70760.1  94 CPAGYKCR 101
                 44455555 PP

>> zf-CCCH  Zinc finger C-x8-C-x5-C-x3-H type (and similar)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.3    0.0039        17      12      26 ..      55      69 ..      47      70 .. 0.83
   2 ?    4.0   1.5     0.011        50       5      22 ..      84     101 ..      83     101 .. 0.90

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0039
                HS--TTGGG-SSBSC CS
     zf-CCCH 12 tGyCkyGdrCkFaHg 26
                + +C++ ++CkF H+
  EPX70760.1 55 GKECPFQNNCKFGHD 69
                569*********886 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.011
                 CBCHHHHHS--TTGGG-S CS
     zf-CCCH   5 lCrffmrtGyCkyGdrCk 22 
                  C +f  +G C+ G +C+
  EPX70760.1  84 KCVNFETYGVCPAGYKCR 101
                 6899**********9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (634 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1104  (0.0615762); expected 358.6 (0.02)
Passed bias filter:                      537  (0.0299515); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.67u 0.34s 00:00:01.01 Elapsed: 00:00:00.49
# Mc/sec: 3918.28
//
Query:       EPX70761.1  [L=341]
Description: dihydroorotase Ura2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.8e-08   33.5   0.1    1.2e-07   31.4   0.1    1.8  1  Amidohydro_1  Amidohydrolase family
    1.3e-07   31.7   0.0    2.2e-07   31.0   0.0    1.4  1  Amidohydro_2  Amidohydrolase


Domain annotation for each model (and alignments):
>> Amidohydro_1  Amidohydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4   0.1   1.3e-11   1.2e-07       3     256 ..       5     261 ..       3     297 .. 0.67

  Alignments for each domain:
  == domain 1  score: 31.4 bits;  conditional E-value: 1.3e-11
                   EE-EEEEEEECETTECSSSGHHHHHSTTHHHHHHHHHHHHHHHHTTEEEEEEEEHSSTHHHHHHHHHHHTSSSEEEEEEESSEGGSGCCCSHHHHHH CS
  Amidohydro_1   3 lPGlIDaHvHleqsllrgatledwlvppetaaealesgiktalksGtttvadmgattstgiealleaaeelplglrilggkvsldrgsaetskasre 99 
                   lPGl D+HvHl++++++       +vp      ++   ++ +l  ++ttv ++ +   + ie+l   ++ l                s   s + + 
    EPX70761.1   5 LPGLADMHVHLRDGEMMKH-----VVPTVNQGGVSVAYVMPNLVPPITTVDACLKY-KEEIERLDPKTKYL---------------MSLYLSQEITP 80 
                   8*************88666.....344445556778999**************993.33555555555554...............33333333333 PP

                   HHHHHHHHHHHHCTTTCEE.EEEEECGTCCSHHH......HHHHHHHHHHHHTTEEEEEE...TSSCHHHHHHHHHHTTTEEEETTTTSTCCHHTTT CS
  Amidohydro_1 100 klkagaaetikgkadgvvk.valapheapafsde......elkealkeakkrdlpvaiHa...letkgevedaeaafgetiehgthlevaeslglld 186
                   +++  a       ++ +v  v+ +p++a+++sd+        ++ + + ++ ++ + iH    ++t+ +v++ae +f      +t+l+  +   +++
    EPX70761.1  81 EVIYDA-------SKRGVRgVKSYPKGATTNSDNgvesyePFYATFAAMEETGMILNIHGevpASTSDDVFHAEPKFL-----PTLLDLHKR--FPN 163
                   333333.......455666688999999999999665555566666677777**************************.....889999888..444 PP

                   HCCEEEHCTCEEE.........HHHHHHHHHHHHHHCEE............HH.HHHHHHSEHHHHHHHHHHHH.TSCEEEEEECT........... CS
  Amidohydro_1 187 eiklilahgvhlt.........pteaellkerlkeagva............hc.pfsnsilrsgrealrkalde.GvkvglgtDga........... 249
                     k++l+h+ +           pt a ++ ++                   hc +++  + +++r al ka ++ + k+++g+D+a           
    EPX70761.1 164 L-KIVLEHCSTEAaieavlqcgPTVAGTITAH------HmyithkdwekdpHCfCKPVAKTEKDRLALVKAATSrNPKFFFGSDSAphpqsskektp 253
                   4.666666666554333333333322222222......01223445555556647899**************************9988887555555 PP

                   .TSSCCGG CS
  Amidohydro_1 250 .asgnsln 256
                    a+g   +
    EPX70761.1 254 pAAGVFTQ 261
                   54444444 PP

>> Amidohydro_2  Amidohydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.0   0.0   2.4e-11   2.2e-07      99     192 ..      79     174 ..      73     269 .. 0.77

  Alignments for each domain:
  == domain 1  score: 31.0 bits;  conditional E-value: 2.4e-11
                   HHHHHHHHHHTTECEEEEESSTTTCCTTTCGGH....HHHHHHHHHHT-EEEEE....CHHHCHHHHHHHHHHHHHHHCCHHHHCTTSEEEESGGGT CS
  Amidohydro_2  99 aaeleraveelgfkGvrlnphvggddllgdrld....rpifealeelglpvdihtGpspewlfggpqettraiqplllsgvarkfPnlkivlaHgGg 191
                   + e +  + ++g++Gv+ +p     + ++   +    + +f+a+ee+g  + ih  +  +++  ++   +++  ++ l ++  +fPnlkivl H++ 
    EPX70761.1  79 TPEVIYDASKRGVRGVKSYPKGATTNSDNGVESyepfYATFAAMEETGMILNIH--GEVPASTSDDVFHAEPKFLPTLLDLHKRFPNLKIVLEHCST 173
                   66788889999******9999987777776666789999***************..44444444445555556669999999*************97 PP

                   T CS
  Amidohydro_2 192 p 192
                    
    EPX70761.1 174 E 174
                   7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (341 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       300  (0.0167327); expected 358.6 (0.02)
Passed bias filter:                      284  (0.0158403); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.29s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 2217.60
//
Query:       EPX70762.1  [L=348]
Description: mRNA export factor Srp2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-28   97.9   0.1      2e-13   49.9   0.1    2.2  2  RRM_1       RNA recognition motif. (a.k.a. RRM, RBD, or RNP d
     0.0026   17.8   0.0      0.097   12.7   0.0    2.2  2  RRM_3       RNA binding motif
  ------ inclusion threshold ------
       0.04   14.0   0.0      0.079   13.0   0.0    1.5  1  Limkain-b1  Limkain b1
       0.18   11.8   0.0        3.6    7.7   0.0    2.2  2  DbpA        DbpA RNA binding domain


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.9   0.1   4.5e-17     2e-13       1      69 [.       6      67 ..       6      68 .. 0.98
   2 !   46.1   0.0   7.3e-16   3.3e-12       1      69 [.     100     164 ..     100     165 .. 0.95

  Alignments for each domain:
  == domain 1  score: 49.9 bits;  conditional E-value: 4.5e-17
                EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1  1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69
                lf+g +pp + +e+++++F+++G+i ++k+++       gf+f+e e+ +dA+++++ ++gk+++g+++
  EPX70762.1  6 LFIGRIPPQAVREDVEDFFKGYGQILDCKVMN-------GFGFIELEDARDARDIVNDFQGKEFMGSQI 67
                8*******************************.......9**************************987 PP

  == domain 2  score: 46.1 bits;  conditional E-value: 7.3e-16
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 l+V+nL+++v++++Lk+++++ G+      ++d+++++ g + VeF +++d+++Al +lng++++g+ +
  EPX70762.1 100 LIVENLSEEVSWQDLKDVMRQAGEP----TFTDAHRQNPGSGVVEFSTEDDMRNALTNLNGEEIKGTAI 164
                 78***********************....7888999******************************987 PP

>> RRM_3  RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0     0.025   1.1e+02      11      57 ..      13      57 ..       6      85 .. 0.69
   2 !   12.7   0.0   2.2e-05     0.097       4      60 ..     100     157 ..      97     167 .. 0.83

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.025
                SS--HHHHHHHCHCCS-ECEEEE-TTSSEEEEEESSHHHHHHHHHHH CS
       RRM_3 11 kelsredikellsklgevayvdyekgdkegevrFkedeeakkaleka 57
                 +  red+ ++++ +g++   d +  +  g +  +++ +a+ +++  
  EPX70762.1 13 PQAVREDVEDFFKGYGQIL--DCKVMNGFGFIELEDARDARDIVNDF 57
                5667************984..66666666777777766666666655 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 2.2e-05
                 EEEEE-SSS--HHHHHHHCHCCS-ECEEEE-TTS.SEEEEEESSHHHHHHHHHHHHHC CS
       RRM_3   4 lklsGlnkelsredikellsklgevayvdyekgd.kegevrFkedeeakkalekatea 60 
                 l ++ l++e+s +d+k+++++ ge  + d ++ +  +g v F ++++ ++al ++   
  EPX70762.1 100 LIVENLSEEVSWQDLKDVMRQAGEPTFTDAHRQNpGSGVVEFSTEDDMRNALTNLNGE 157
                 56777899********************976655279*************99988765 PP

>> Limkain-b1  Limkain b1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   1.8e-05     0.079      41      79 ..     134     172 ..     100     179 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.8e-05
  Limkain-b1  41 gksavlrfanqeaaeralkrleneDvfGnritvsekprn 79 
                  +s v+ f+ ++  + al  l++e++ G  i+++e p+ 
  EPX70762.1 134 PGSGVVEFSTEDDMRNALTNLNGEEIKGTAIALREDPNA 172
                 5799*******************************9865 PP

>> DbpA  DbpA RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.0    0.0008       3.6      31      72 .]      29      71 ..      25      71 .. 0.88
   2 ?    1.8   0.0     0.054   2.4e+02      49      70 ..     145     166 ..     143     168 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0008
                GEEEEEE-SS-EEEEE-.TT-HHHHHHHHTT--SSS----EEE CS
        DbpA 31 dIGkIdildkfSfvevp.kekaeevlkalkkkkikGrkvrver 72
                +I + ++++ f f+e++ +++a+++++ +++k++ G ++ ve+
  EPX70762.1 29 QILDCKVMNGFGFIELEdARDARDIVNDFQGKEFMGSQIVVEP 71
                677778999999***963789******************9995 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.054
                 T-HHHHHHHHTT--SSS----E CS
        DbpA  49 ekaeevlkalkkkkikGrkvrv 70 
                 ++ +++l +l++++ikG  + +
  EPX70762.1 145 DDMRNALTNLNGEEIKGTAIAL 166
                 677899***********98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (348 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       310  (0.0172904); expected 358.6 (0.02)
Passed bias filter:                      189  (0.0105416); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.45
# Mc/sec: 2333.91
//
Query:       EPX70763.1  [L=200]
Description: rho family GTPase Rho2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.1e-51  172.5   0.0    5.9e-51  172.3   0.0    1.0  1  Ras        Ras family
    4.9e-23   81.6   0.0    9.7e-23   80.7   0.0    1.5  1  Roc        Ras of Complex, Roc, domain of DAPkinase
    2.6e-06   27.0   0.0      4e-06   26.4   0.0    1.3  1  Arf        ADP-ribosylation factor family
     0.0033   16.8   0.0     0.0038   16.6   0.0    1.2  1  Gtr1_RagA  Gtr1/RagA G protein conserved region
  ------ inclusion threshold ------
      0.016   14.6   0.0      0.021   14.3   0.0    1.2  1  SRPRB      Signal recognition particle receptor beta subunit
       0.12   12.2   0.0        5.3    6.8   0.0    2.4  2  PduV-EutP  Ethanolamine utilisation - propanediol utilisation


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  172.3   0.0     2e-54   5.9e-51       1     160 [.      10     181 ..      10     183 .. 0.98

  Alignments for each domain:
  == domain 1  score: 172.3 bits;  conditional E-value: 2e-54
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHH.HHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvk.kwveeik 98 
                 Klv+vGd+a+GKtsll  f+ ++F++ey +T+ +++y+++++vdgk+v+l +wDTAGqee+++lr+++y +a+ il+ ++i+s +s+env+ kw+ee++
  EPX70763.1  10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTV-FENYVSDCRVDGKSVQLALWDTAGQEEYERLRPMSYAKAHIILIGFAIDSPDSLENVStKWIEEVN 107
                 99******************************.*********************************************************99******* PP

                 HHSTTTSEEEEEEETTTGGG............G-SS-HHHHHHHHHHHT.SEEEEEBTTTTCTHHHHHHHHHHHH CS
         Ras  99 rvaeenvpivLvGnKvDlee............kravsteegeelakelg.lkfletSAktnenveeafeellrei 160
                 + ++ n+p++LvG K+Dl++            ++ v+ +++e +a+++g  k++e+S  t  +v+++fe+++r++
  EPX70763.1 108 TLCP-NIPFILVGMKADLRTdpgaieemrrrnQNFVKPQQAEIVAQRIGaRKYMECSSLTGDGVDDVFEAATRAA 181
                 ****.7*******************************************899******************99986 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.7   0.0   3.2e-26   9.7e-23       1     119 [.      10     123 ..      10     124 .. 0.87

  Alignments for each domain:
  == domain 1  score: 80.7 bits;  conditional E-value: 3.2e-26
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE...GHHHHCH. CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd...srssenl. 95 
                 K+v+vGd++ GKtsll+ f+ + f +++ +t+  ++++  + +++g       k+v+l++WDtaGqe+++ l+p+ + +a+++++ +     +s en+ 
  EPX70763.1  10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSD-C-RVDG-------KSVQLALWDTAGQEEYERLRPMSYAKAHIILIGFAidsPDSLENVs 99 
                 99******************************9999875.4.3444.......789****************************987632333446663 PP

                 HHHHHHHHHHCSSS-EEEEEE-TT CS
         Roc  96 keWlkelkkvagkspvilvgnkiD 119
                  +W++e+++ ++++p+ilvg k+D
  EPX70763.1 100 TKWIEEVNTLCPNIPFILVGMKAD 123
                 68********************99 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   0.0   1.3e-09     4e-06      12     169 ..       6     175 ..       1     180 [. 0.65

  Alignments for each domain:
  == domain 1  score: 26.4 bits;  conditional E-value: 1.3e-09
                 TTEEEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSSEEEE...EEEETTEEEEEEEE-SSGGGGGGGGGGCTTESEEE..EEEETT-CTTHHHHHHHH CS
         Arf  12 kkelrilllGLDnaGKtTilkklkleelvt.tvPTigfnve...eleiknlkftvwDvGGqeklRplWknYfektdavi..fvvDsadreRleeakeeL 104
                 +   +++++G  + GKt +l  ++l+ + t  vPT+  n     ++  k +++ +wD  Gqe+  +l    ++k + ++  f +Ds d+  le+ +++ 
  EPX70763.1   6 SIRRKLVVVGDGACGKTSLLSVFTLGYFPTeYVPTVFENYVsdcRVDGKSVQLALWDTAGQEEYERLRPMSYAKAHIILigFAIDSPDS--LENVSTKW 102
                 456789****999**************977589***988541225778**************9988887777666665447999*9987..44444333 PP

                 HHHCTSGCCTTSEEEEEEE-TTSTT...SS-HHHHHHHTTGGG....SS..SSSSEEEEEEBTTTTBTHHHHHH CS
         Arf 105 kalleeeelkevallvlaNKqDlpe...alseeelrellglee....lk..gkrkleiqkcsavkgeglkegle 169
                  + ++     ++++++++ K Dl++   a++e   r++  ++     +        + ++cs ++g+g+++ +e
  EPX70763.1 103 IEEVN-TLCPNIPFILVGMKADLRTdpgAIEEMRRRNQNFVKPqqaeIVaqRIGARKYMECSSLTGDGVDDVFE 175
                 22222.22358999999999999751114444444433322223344222211233456788888888877765 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.3e-06    0.0038       1      64 [.      10      72 ..      10     162 .. 0.74

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.3e-06
   Gtr1_RagA  1 kvLLmGksgsGKtsmrsiiFdnylardtlrlgatidveksevrflgnltlnlwDcgGqeafvee 64
                k++ +G +  GKts+ s+    y +++ +       v+  +v   + ++l lwD  Gqe++   
  EPX70763.1 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRV-DGKSVQLALWDTAGQEEYERL 72
                78999********************99888777777777777.36779***********98664 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   6.9e-06     0.021       3      86 ..       8      92 ..       6     121 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 6.9e-06
                --EEEEE-STTSSHHHHHHHHHHSS---B---S..S-EEETTG...GGTT-SEEEETT-GCCSHHHHHHHHHHGGEEEEEEEEETT CS
       SRPRB  3 kpavllvGlsdsGKTslftrLttdsvkktvtSq..essaalkvksekgskltliDfPGheklrqklleklkaksslkglvfvvDSt 86
                ++++++vG   +GKTsl+   t + + + ++    e+ +++   + k  +l+l D  G+e+   +l     ak+++  + f +DS 
  EPX70763.1  8 RRKLVVVGDGACGKTSLLSVFTLGYFPTEYVPTvfENYVSDCRVDGKSVQLALWDTAGQEEYE-RLRPMSYAKAHIILIGFAIDSP 92
                67899*******************665555444347777776667889999999****99873.4555555777788888888884 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.0    0.0018       5.3       2      19 ..       9      26 ..       8      49 .. 0.80
   2 ?    3.0   0.0     0.026        77     110     139 ..     146     175 ..     121     178 .. 0.85

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0018
   PduV-EutP  2 kkilliGkvgsGKttLtq 19
                +k++++G   +GKt+L  
  EPX70763.1  9 RKLVVVGDGACGKTSLLS 26
                6899***********965 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.026
   PduV-EutP 110 aveelLksaGaekifevsavekegieellk 139
                 ++e   +  Ga+k +e s+++ +g++++++
  EPX70763.1 146 QAEIVAQRIGARKYMECSSLTGDGVDDVFE 175
                 556667889*****************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       454  (0.0253221); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.49u 0.29s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 1256.44
//
Query:       EPX70764.1  [L=1110]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.8e-59  199.4  10.1    5.8e-59  199.4  10.1    4.5  4  NST1      Salt tolerance down-regulator


Domain annotation for each model (and alignments):
>> NST1  Salt tolerance down-regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.0   1.7    0.0026        46      29      59 ..      32      60 ..      24     103 .. 0.52
   2 !  199.4  10.1   3.2e-63   5.8e-59      29     182 ..     192     344 ..     163     357 .. 0.75
   3 ?  -25.3  51.5         1   1.8e+04      13     129 ..     584     721 ..     562     736 .. 0.41
   4 ?   -7.4  15.6         1   1.8e+04       3      55 ..     684     736 ..     676     766 .. 0.35

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.0026
        NST1 29 esskrkkkkkkkkknrsnsnnqneesstsls 59
                 ++k+++kkkk++k++++++   ++++  +s
  EPX70764.1 32 ANAKKRNKKKKRQKAKKQAE--TSAAAPGMS 60
                33333344444444433333..333333333 PP

  == domain 2  score: 199.4 bits;  conditional E-value: 3.2e-63
        NST1  29 esskrkkkkkkkkknrsnsnnqneesstslstsksvaittssarsvknnppsvssaalrsakkvskdrsiwntssqEereklkeFWlsLgEeERReLvk 127
                 +s+++kkkkkkkkk+++++  + e+ +++ + + +   + +s   ++   +++ s+ ++++   skd+ iw  s++Eere+++eFWlsL+E ERR+Lvk
  EPX70764.1 192 TSTSSKKKKKKKKKSKNANPVTTESIDSQANVQDDLPSQDQSCYDNT--DQHSFSSFSNTEFGKSKDK-IWAASNTEEREQIREFWLSLSEIERRSLVK 287
                 45666667777777766666555555555555554444333333333..2223333444555568888.****************************** PP

        NST1 128 vEKeavLkKmKeqqKhsCsCsvCGRkRvaiEEELEvlYDaYYeeLeqYanmndk..s 182
                 vEKeavL+KmKeqqK+sCsCsvCGRkR+aiEEELEvlYDaYYeeLeqYan++++   
  EPX70764.1 288 VEKEAVLQKMKEQQKYSCSCSVCGRKRLAIEEELEVLYDAYYEELEQYANIQRNraL 344
                 **************************************************9987432 PP

  == domain 3  score: -25.3 bits;  conditional E-value: 1
        NST1  13 qqqqqdknevdeksqvesskrkkkkkkkkk.......................nrsnsnnqneesstslstsksvaittssarsvknnppsvssaalrs 88 
                 +++++ k+e + ++ +e+++++ kkk+ +k                       ++++  +++++++ ++  +k    +++ ++  ++ +++ ++   ++
  EPX70764.1 584 EEENRRKQERELRKLKEKERKRDKKKQ-QKlakeeerqkreaerlaeetaqkaAEAKKAEEARKRKEEQRLKK--EEKKRLQELERQRKEERRRIEAEE 679
                 333333333333333222222222222.222333333333444444433322211111111111222222222..222222223333333333444444 PP

        NST1  89 akkvskdrsiwntssqEerek.lkeFWlsLgEeERReLvkvE 129
                  +k+++++++++++++Eer++ l+e  l+L   E  +L k E
  EPX70764.1 680 RQKQKEQEKKLKKQQEEERQNaLREQQLHLQKLEEEKLRKKE 721
                 444444444666666666665467776666655555555554 PP

  == domain 4  score: -7.4 bits;  conditional E-value: 1
        NST1   3 dqseensqeqqqqqqdknevdeksqvesskrkkkkkkkkk..nrsnsnnqneess 55 
                 +++e  ++ ++qq++++++  +++q + +k +++k +kk   ++   ++++e++ 
  EPX70764.1 684 KEQE--KKLKKQQEEERQNALREQQLHLQKLEEEKLRKKEleEEERRRSKEEQER 736
                 1111..1222222222222222222222222222222222112222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1110 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3571  (0.199175); expected 358.6 (0.02)
Passed bias filter:                      798  (0.0445089); expected 358.6 (0.02)
Passed Vit filter:                       464  (0.0258799); expected 17.9 (0.001)
Passed Fwd filter:                       121  (0.00674884); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 2.61u 0.42s 00:00:03.03 Elapsed: 00:00:00.69
# Mc/sec: 4853.96
//
Query:       EPX70765.1  [L=342]
Description: hypothetical protein SOCG_04192 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       549  (0.0306208); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 2368.75
//
Query:       EPX70766.1  [L=232]
Description: TATA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      6e-66  218.4   0.1    1.9e-32  111.0   0.0    2.1  2  TBP       Transcription factor TFIID (or TATA-binding protein
    0.00051   20.1   0.0       0.37   10.9   0.0    2.3  2  DUF3378   Domain of unknown function (DUF3378)


Domain annotation for each model (and alignments):
>> TBP  Transcription factor TFIID (or TATA-binding protein, TBP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.7   0.0     1e-34     9e-31       3      84 ..      58     137 ..      56     138 .. 0.97
   2 !  111.0   0.0   2.1e-36   1.9e-32       1      85 []     146     229 ..     146     229 .. 0.97

  Alignments for each domain:
  == domain 1  score: 105.7 bits;  conditional E-value: 1e-34
                 EEEEEEEEEE-SSCE-HHHHHHHCCTTTEEE-TTTSSSEEEEETTTTEEEEE-TTSEEEEECESSHHHHHHHHHHHHHHHHH CS
         TBP   3 kiqNvvasanlgleldLeklalkaekrnaeYeperfpglvyrlrepkvtaliFssGkvvitGakseeelreaakkiapilkk 84 
                 + qN+va++nl+++ldL+++al+a  rnaeY+p+rf ++++r+repk taliF+sGk+v++G kse++++ a +k+a+i++k
  EPX70766.1  58 TLQNIVATVNLDCRLDLKTIALHA--RNAEYNPKRFAAVIMRIREPKSTALIFASGKMVVLGGKSEDDSKLASRKYARIIQK 137
                 78*******************998..*******************************************************9 PP

  == domain 2  score: 111.0 bits;  conditional E-value: 2.1e-36
                 EEEEEEEEEEEE-SSCE-HHHHHHHCCTTTEEE-TTTSSSEEEEETTTTEEEEE-TTSEEEEECESSHHHHHHHHHHHHHHHHHC CS
         TBP   1 dfkiqNvvasanlgleldLeklalkaekrnaeYeperfpglvyrlrepkvtaliFssGkvvitGakseeelreaakkiapilkkl 85 
                 dfkiqN+v+s++++++++Le+la++ +  +++Yepe fpgl+yr+ +pkv++liF+sGk+v+tGak +ee+++a++ i+p+l+++
  EPX70766.1 146 DFKIQNIVGSCDVKFPIRLEGLAYS-HGTFSSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKVREEIYQAFEAIYPVLSEF 229
                 69********************999.79******************************************************875 PP

>> DUF3378  Domain of unknown function (DUF3378)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.0   0.00076       6.8      27      60 ..      91     124 ..      73     137 .. 0.83
   2 !   10.9   0.0   4.1e-05      0.37      24      57 ..     179     212 ..     172     218 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.00076
     DUF3378  27 ppyavfaakkndttItaYtSgKVlFQGknaeaeA 60 
                    +++++++++ t  ++ SgK ++ G + e ++
  EPX70766.1  91 FAAVIMRIREPKSTALIFASGKMVVLGGKSEDDS 124
                 556899****************999888887665 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 4.1e-05
     DUF3378  24 skkppyavfaakkndttItaYtSgKVlFQGknae 57 
                  +  p+ +++  k++++  ++ SgK+++ G++  
  EPX70766.1 179 PELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKVR 212
                 56689************************99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       373  (0.0208043); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.29s 00:00:00.74 Elapsed: 00:00:00.45
# Mc/sec: 1550.07
//
Query:       EPX70767.1  [L=758]
Description: cytoplasmic cysteine-tRNA ligase Crs1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     4e-143  476.3   0.0   7.5e-143  475.4   0.0    1.4  1  tRNA-synt_1e  tRNA synthetases class I (C) catalytic domain
    1.1e-10   40.8   1.1    1.1e-05   24.4   0.0    2.5  2  tRNA-synt_1g  tRNA synthetases class I (M)
    3.2e-05   22.4   0.0     0.0017   16.7   0.0    2.5  2  tRNA-synt_1   tRNA synthetases class I (I, L, M and V)
    0.00086   18.3   0.0      0.051   12.5   0.0    2.3  2  tRNA-synt_1f  tRNA synthetases class I (K)
  ------ inclusion threshold ------
      0.012   14.5   0.4       0.57    9.0   0.0    2.5  2  tRNA-synt_1c  tRNA synthetases class I (E and Q), catalytic d


Domain annotation for each model (and alignments):
>> tRNA-synt_1e  tRNA synthetases class I (C) catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  475.4   0.0  2.1e-146  7.5e-143       7     300 ..      38     455 ..      33     456 .. 0.98

  Alignments for each domain:
  == domain 1  score: 475.4 bits;  conditional E-value: 2.1e-146
                   TTEEEEEEEEEBTTS--BHHHHHHHHHHHHHHHHHHH.TT-EEEEEEEBB--SHHHHHHHHHTTS-............................... CS
  tRNA-synt_1e   7 ekkvtlYvCGptvydashlGhaRslvafDilrrilqa.lgYdvqfvqnvtDidDkiikrareeeks............................... 71 
                      vt+Y+CGptvydash+GhaR++v++Dilrrilq+ +gY+v+fvqnvtDidDkii+rar+++++                               
    EPX70767.1  38 GSMVTWYCCGPTVYDASHMGHARNYVTTDILRRILQSyFGYNVTFVQNVTDIDDKIILRARHQHLFeqykkqnehnfastdvkakvsdawltyakkn 134
                   4579********************************99*********************************************************** PP

                   ...................................................................................HHHHHHHHHHHHHH CS
  tRNA-synt_1e  72 ...................................................................................vkelaekfieefkk 85 
                                                                                                      +++l++++++++++
    EPX70767.1 135 lpeppqsmeewpkwlaandvttlalaapkvplyvdslnqgmeaiklaeeakledaelfwtkvqevlvpvldselgstvtdpaiFRKLSAYWENDYNQ 231
                   ************************************************************************************************* PP

                   HHHHTT----SB--BGGGGHHHHHHHHHHHHHTTSEEE-TTS-EEE-GGG-....TTTTTTTT--HHHHHHT----S-....-S-SSTT-EEEEEE- CS
  tRNA-synt_1e  86 dleaLnvlkptleprvsekvdeiielvekliekgyaYavsdgdvyfdvskk....eeYgklskqnleelelgaegevs....eekkdkkDfaLWkas 174
                   d++aLnvl+pt+ +rvse v+ei+++v+k+i++gyaY+v+dg vyfd++++    + Y+kl+++n+++++l+aege+s    ++kk++ DfaLWk+s
    EPX70767.1 232 DMRALNVLPPTTVTRVSEFVPEIVDYVQKIIDRGYAYPVTDGSVYFDTEAFskagHFYAKLEPWNKGNRDLIAEGEGSlaalTDKKRPGDFALWKSS 328
                   ***********************************************9764223388********************999***************** PP

                   -TTS--B--TTSSEEE-SSHHHHHHHHHHH-SSEEEEEEEGGGTTTHHHHHHHHHHHHSS.S--EEEEEEE--EEETTBE--TTTT---BHHHHHTT CS
  tRNA-synt_1e 175 kegepswdsPwgkGRPGWhieCsvmaskllgseidihsGGiDLafPhhenelaqseaafd.kqlvkyflhnghlkiegekmsksLknfitikdvlkk 270
                   k+gepswdsPw+kGRPGWhieCsvmas++lgs++dihsGG+DLafPhh+nelaqsea++d  q+++yflh+ghl+ieg+kmsksLknfitik++lkk
    EPX70767.1 329 KPGEPSWDSPWSKGRPGWHIECSVMASAVLGSNVDIHSGGVDLAFPHHDNELAQSEAYHDcPQWINYFLHTGHLHIEGQKMSKSLKNFITIKEILKK 425
                   ************************************************************************************************* PP

                   S-HHHHHHHHHSS-TTS-EEE-HHHHHHHH CS
  tRNA-synt_1e 271 fdprqlRllllsahyrsqldfkeelleeak 300
                   f+prqlRl +l ++++sqldfk+ ll+++ 
    EPX70767.1 426 FSPRQLRLSFLLQQWNSQLDFKDALLAHVL 455
                   *************************99875 PP

>> tRNA-synt_1g  tRNA synthetases class I (M)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.2   3.3e-06     0.012      12      83 ..      52     119 ..      43     132 .. 0.83
   2 !   24.4   0.0     3e-09   1.1e-05     316     376 ..     397     456 ..     380     468 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 3.3e-06
                   S---HHHHHHHHHHHHHHHHHHHT.T-EEEEEEEE---SHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHHTT- CS
  tRNA-synt_1g  12 gklHlGhllevisaDifaRykrlr.geevlfvcgtDehGtpielkAekegvtpeelvekvheeikelfkklni 83 
                   ++ H+Gh+++++ +Di+ R  +   g++v+fv        +i l+A+++     +l e++++++++ f++ ++
    EPX70767.1  52 DASHMGHARNYVTTDILRRILQSYfGYNVTFVQNVTDIDDKIILRARHQ-----HLFEQYKKQNEHNFASTDV 119
                   678****************988766*******99888899999999875.....5667777777777776665 PP

  == domain 2  score: 24.4 bits;  conditional E-value: 3e-09
                   EEE--EEE--------------HHHHHHHH-HHHHHHHHHHHS-TTS-EEE-HHHHHHHHH CS
  tRNA-synt_1g 316 vaheyltvegkKlSkSrgvvvkakealerldadllRYylaaeapekkDldfswedfvervN 376
                     +++l +eg+K+SkS ++++++ke+l+++++ +lR  ++ ++  ++ ldf+ + + + +N
    EPX70767.1 397 LHTGHLHIEGQKMSKSLKNFITIKEILKKFSPRQLRLSFLLQQ-WNSQLDFKDALLAHVLN 456
                   5789********************************9887654.45567777666666666 PP

>> tRNA-synt_1  tRNA synthetases class I (I, L, M and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.0   0.0    0.0068        24      31      67 ..      47      84 ..      20     137 .. 0.76
   2 !   16.7   0.0   4.7e-07    0.0017     554     596 ..     399     441 ..     361     447 .. 0.78

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.0068
  tRNA-synt_1 31 PPyvtGslHiGhalaktlkdiviry.krmkGkevlyvp 67
                  P v  + H+Gha + +  di+ r+ ++  G++v++v 
   EPX70767.1 47 GPTVYDASHMGHARNYVTTDILRRIlQSYFGYNVTFVQ 84
                 57788899****************73678899999975 PP

  == domain 2  score: 16.7 bits;  conditional E-value: 4.7e-07
  tRNA-synt_1 554 glvrdeeGrKmSKslgNvidpldvikkygadalRltlilsdvg 596
                     +  eG+KmSKsl+N i  ++++kk +   lRl  +l +  
   EPX70767.1 399 TGHLHIEGQKMSKSLKNFITIKEILKKFSPRQLRLSFLLQQWN 441
                  5556679***************************988866555 PP

>> tRNA-synt_1f  tRNA synthetases class I (K)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.3   0.0    0.0087        31      37      73 ..      54      91 ..      39     152 .. 0.85
   2 !   12.5   0.0   1.4e-05     0.051     278     339 ..     405     464 ..     390     483 .. 0.75

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.0087
  tRNA-synt_1f 37 iHiGnlrevltadlvaralrkr.geevrlilisDdmDg 73
                   H+G +r+ +t+d+++r l++  g +v ++  + d+D 
    EPX70767.1 54 SHMGHARNYVTTDILRRILQSYfGYNVTFVQNVTDIDD 91
                  7******************9986788888888888874 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 1.4e-05
  tRNA-synt_1f 278 ggekmssSkGnvltledwlevaepevlrflilrrkPkkakkldldleilrlvdeYdklerky 339
                   +g+kms+S  n++t++++l+  +p  lr+ +l ++ +++++++    +l+ v + +++ +++
    EPX70767.1 405 EGQKMSKSLKNFITIKEILKKFSPRQLRLSFLLQQWNSQLDFKD--ALLAHVLNVEQTLENF 464
                   456*************************9999977777666653..3555544444444444 PP

>> tRNA-synt_1c  tRNA synthetases class I (E and Q), catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.0   0.00016      0.57      53      96 ..     226     269 ..     214     274 .. 0.87
   2 ?    2.4   0.4     0.016        58      84     155 ..     611     692 ..     598     708 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00016
                   HHHHHHHHHHTT---SSEEEEGGGGHHHHHHHHHHHHHTTSEEE CS
  tRNA-synt_1c  53 eesiledlkwlgikwdekptyqsdrfdelkkyaeeLikkGkAYv 96 
                   e+   +d+  l++ +  ++t+ s+   e+ +y++++i +G+AY 
    EPX70767.1 226 ENDYNQDMRALNVLPPTTVTRVSEFVPEIVDYVQKIIDRGYAYP 269
                   55566789999999989**************************5 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.016
                   HHHHHHHTTSEEEE-STHHHHHHHHCCSS..........HSS-TTTTS-HHHHHHHHHHHHHTTHSTTTS-EEEESSBTTSS CS
  tRNA-synt_1c  84 yaeeLikkGkAYvcectkeeleeereeqe..........klgskerdrydeenlklfeeemkkgkaegekavvRlkideess 155
                    ++e+++   A+++++ +e   +++ +q+          +   ++rd+ + e  +  +++mk ++++++k+v R+   + s+
    EPX70767.1 611 PIQEILQACDAFRDYDMAELGVSLNDRQQgpaliklvdpQELIQARDQKIAEEQEKEAKKMKAKADQEKKYVERIMKGKVSP 692
                   5678888888888888888655555554455677777663444677777777777777999999999999998876655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (758 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1311  (0.0731218); expected 358.6 (0.02)
Passed bias filter:                      565  (0.0315132); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.73u 0.26s 00:00:00.99 Elapsed: 00:00:00.47
# Mc/sec: 4897.05
//
Query:       EPX70768.1  [L=200]
Description: kinetochore protein Nnf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-23   83.3   6.6    1.4e-23   83.3   6.6    1.7  2  Nnf1      Nnf1
  ------ inclusion threshold ------
      0.026   15.1   3.0        5.5    7.6   0.8    2.3  2  TipAS     TipAS antibiotic-recognition domain
          8    6.5   6.9        8.4    6.5   4.6    2.0  2  DUF1664   Protein of unknown function (DUF1664)


Domain annotation for each model (and alignments):
>> Nnf1  Nnf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1       1.9   1.1e+04      85      96 ..       5      16 ..       2      21 .. 0.41
   2 !   83.3   6.6   2.4e-27   1.4e-23       2     109 ..      39     141 ..      38     142 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.9
                HHHHHHHHHHHH CS
        Nnf1 85 eeLearlqelea 96
                e+L+a l+++ +
  EPX70768.1  5 EQLDASLRRTLS 16
                333333333332 PP

  == domain 2  score: 83.3 bits;  conditional E-value: 2.4e-27
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCCHH-T..........TTSSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        Nnf1   2 aLesvhkqmvefleesiraefeeIleerdvvekLneLDdlieeAkerreegeeeasrpevpphtLpPeeliaahlapakkeeqeeLearlqeleaenae 100
                 a+ ++h+q+v+f+e+ +++e ++++eer++++kL+ LD++i+eA er+e+ge +      +++  +P+e+++ahl+++k++ +++L++ ++ele en++
  EPX70768.1  39 AIAAMHQQLVSFFEDTCKQEYAKLIEERGLNQKLDFLDECIKEAMERKESGEPPI-----DIESKQPQEILKAHLYTHKQNLKNKLQEDINELELENQS 132
                 67899********************************************976665.....566666********************************* PP

                 HHHHHHHHH CS
        Nnf1 101 laeeveeqr 109
                 l  +++e +
  EPX70768.1 133 LSGKIKEDE 141
                 *****9976 PP

>> TipAS  TipAS antibiotic-recognition domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.0    0.0015       8.8      54      84 ..      32      62 ..      23      71 .. 0.82
   2 ?    7.6   0.8   0.00092       5.5      47     115 ..      85     153 ..      63     155 .. 0.69

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0015
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TipAS 54 pdseeaqelaeehralieefwgecskeilag 84
                p+ ++ +++a+ h++l++ f ++c++e+ + 
  EPX70768.1 32 PTFKKGKAIAAMHQQLVSFFEDTCKQEYAKL 62
                66678899**********77779***99875 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.00092
                 X..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TipAS  47 alaagkdpdseeaqelaeehralieefwgecskeilaglgqmYvadprftenydkkgeglaeflrdAik 115
                   ++g++p + e ++  e ++a++ +++++ +++ +  + ++ ++++ ++  +++ +++++e++++A +
  EPX70768.1  85 RKESGEPPIDIESKQPQEILKAHLYTHKQNLKNKLQEDINELELENQSLSGKIKEDERKTQEYVHEAQQ 153
                 335555554444444444444444444457999*********************999********9976 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.16   9.5e+02      62      82 ..      66      86 ..      37     103 .. 0.72
   2 ?    6.5   4.6    0.0014       8.4      61     121 ..     105     166 ..      94     171 .. 0.50

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.16
     DUF1664 62 rhLssridrvdkkldeqkeis 82
                r L++++d +d+ ++e +e +
  EPX70768.1 66 RGLNQKLDFLDECIKEAMERK 86
                567778888888777777755 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0014
     DUF1664  61 krhLssridrvdkkldeqkeiskeikeev.tevredlseigedvesvkeaveglesklerie 121
                 k hL  + +++ +kl+e ++  +  ++ +  +++ed ++++e v++ +++  +le+++++++
  EPX70768.1 105 KAHLYTHKQNLKNKLQEDINELELENQSLsGKIKEDERKTQEYVHEAQQILLQLETTVKNMD 166
                 44555555555555544433333333333134555555555555555555555555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2033  (0.113392); expected 358.6 (0.02)
Passed bias filter:                      720  (0.0401584); expected 358.6 (0.02)
Passed Vit filter:                        70  (0.00390429); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 1358.15
//
Query:       EPX70769.1  [L=170]
Description: peptide methionine sulfoxide reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-62  210.1   1.0      2e-62  209.9   1.0    1.0  1  PMSR      Peptide methionine sulfoxide reductase
  ------ inclusion threshold ------
       0.15   12.0   0.0       0.46   10.4   0.0    1.7  2  Fae       Formaldehyde-activating enzyme (Fae)


Domain annotation for each model (and alignments):
>> PMSR  Peptide methionine sulfoxide reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  209.9   1.0   2.2e-66     2e-62       1     152 [.       3     158 ..       3     159 .. 0.97

  Alignments for each domain:
  == domain 1  score: 209.9 bits;  conditional E-value: 2.2e-66
                 EEEEE-S-HHHHHHHHCTST....TEEEEEEEEESSS-SS--HHHHHTTTT--EEEEEEEEETTTS-HHHHHHHHHHTS-TT-SSEETTEESGGG--EE CS
        PMSR   1 eavlagGCFWgveklfeklk....GvlstevGYagGktenptYeevcsgktghaEavevvydpekvsleellelffeihDptqlnrqgnDvGtqYrsai 95 
                 +a++a+GCFWgv+++f +      ++l+t+vGY+gG t++ptY++vc+++tghaEa++v +d++ +s+e+++e+ff +hDpt+++rqgnDvGtqYrs+i
  EPX70769.1   3 TAIFAAGCFWGVQEVFLRKYvpaaAILKTSVGYIGGMTDHPTYKQVCTNSTGHAEALKVDFDENLTSYEKIVEFFFAMHDPTTVDRQGNDVGTQYRSVI 101
                 689************9876666879************************************************************************** PP

                 EESSCCHHHHHHHHHHHHHTTHTTSSS---EEEEG-SEEE--CCCTTHHHH-TTS-- CS
        PMSR  96 yytneeqkevaeevleelqkkkalkkkivteieplkefykaeeyHqqYleknpegyc 152
                 ++t +eq+ va++vl+e+q+k+  +kkivt+i p +++++aeeyHqqYl+knp+gy 
  EPX70769.1 102 FTTAPEQEGVAKKVLNEVQEKHFPEKKIVTQIVPSGKWWDAEEYHQQYLDKNPDGYR 158
                 *******************************************************97 PP

>> Fae  Formaldehyde-activating enzyme (Fae)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.17   1.6e+03      13      46 ..      27      60 ..      18      69 .. 0.71
   2 ?   10.4   0.0   5.2e-05      0.46      75     113 ..     103     141 ..      78     154 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.17
         Fae 13 AhidliiGekdgpvgtAfanalanqskghtplla 46
                A     +G  +g  ++   +++ ++s+gh + l 
  EPX70769.1 27 AILKTSVGYIGGMTDHPTYKQVCTNSTGHAEALK 60
                5555666777777777777777777777776665 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 5.2e-05
         Fae  75 lfGpaQaavakavadaveegiipkeeaddlviivsvfid 113
                 +  p Q +vak v++ v+e  +p++++   ++  + + d
  EPX70769.1 103 TTAPEQEGVAKKVLNEVQEKHFPEKKIVTQIVPSGKWWD 141
                 45688*******************998777777776654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       410  (0.022868); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1266.38
//
Query:       EPX70770.1  [L=1093]
Description: tethering factor Uso1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.9e-57  193.4   6.9    7.4e-57  192.8   5.6    2.1  2  Uso1_p115_head  Uso1 / p115 like vesicle tethering protein, h
    0.00016   22.0  33.8    0.00016   22.0  33.8    6.1  5  Uso1_p115_C     Uso1 / p115 like vesicle tethering protein, C
     0.0013   17.7  89.6        0.1   11.4  12.8    4.5  5  Spc7            Spc7 kinetochore protein
  ------ inclusion threshold ------
      0.018   15.6  98.8      0.052   14.1  19.4    5.6  5  APG6_N          Apg6 coiled-coil region
      0.026   14.6   5.3        1.5    9.0   0.3    4.0  3  ORF11CD3        ORF11CD3 domain
        1.1    8.8  74.8       0.05   13.2  27.8    4.4  5  Filament        Intermediate filament protein
        4.6    7.6  81.4        3.3    8.1   9.2    4.2  3  Fez1            Fez1
        4.7    6.6  82.8        4.4    6.7  30.2    4.7  5  Golgin_A5       Golgin subfamily A member 5
        5.6    7.1  84.5        2.6    8.2  13.4    5.2  7  ATG16           Autophagy protein 16 (ATG16)


Domain annotation for each model (and alignments):
>> Uso1_p115_head  Uso1 / p115 like vesicle tethering protein, head region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.0       3.4   6.8e+03      52      72 ..     175     195 ..     159     198 .. 0.83
   2 !  192.8   5.6   3.7e-60   7.4e-57      31     312 .]     355     631 ..     337     631 .. 0.91

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 3.4
  Uso1_p115_head  52 lRvAaleclkayltnneelkl 72 
                     +R Aal++lk ++ + ++l++
      EPX70770.1 175 IRNAALYFLKDLTMDCASLQK 195
                     799*******99999888886 PP

  == domain 2  score: 192.8 bits;  conditional E-value: 3.7e-60
  Uso1_p115_head  31 vlvidaLldlaLsaesvqvfdlRvAaleclkayltnneelkleflsraiegykesndetssassnllealleldaelaldpykvwFasvillhll 125
                     + ++++L++ ++   +v   + R++++ +l+a++++n++l   fl+r+i++y++++++    + nll ++l+++  +++++y+ w+ svil++l+
      EPX70770.1 355 TDILSSLINQIF--LPVISPSHRYSVVFLLRALVESNDHLAETFLQRIIDTYRNKSTS----RMNLLDQYLDISILADTEQYSHWLISVILSYLV 443
                     667788888776..34444567*********************************988....********************************* PP

  Uso1_p115_head 126 eeneeakelarsvklgd....eesgeevvsliqtiselLitslraaadaRisigylmLLivWlfedpdaVndfLsessnlqsLiqalsqsss.ed 215
                       ++e k +++ ++l +     e++ee+v++iq is++Li++lr++     ++gyl+LLi+++ ++ + V+dfLsess lq+L++ l ++ss ++
      EPX70770.1 444 AGSDERKLQLCTIPLYQdiaaDEEDEEEVTFIQCISTKLIATLRHDHALHNCVGYLTLLITLVDNNAHCVKDFLSESSVLQTLLTTLLDESStAS 538
                     **************99889956666*******************9999***********************************99986666659* PP

  Uso1_p115_head 216 vlvqGLcaflLGviyefstkdspvsRadlhslltkrigrdnyiskiaqlredelfrkfeeepklssskddtglpevyfdseFvelfkdnfsriqr 310
                     +++qG++a+lL+++y ++  ds+v++++++  +++ + rd ++++++ lr++e++r+       ++++d   l  + fd+ F+++fkdnf+r++ 
      EPX70770.1 539 SIIQGMIAVLLSLVYYYCPLDSSVPKSSVYGAINSAVTRDVFLNRLHGLRQHEQVRNHIPL---NETTD-GDLDTLLFDTMFIDFFKDNFYRLKH 629
                     ********************************************************98855...44444.99*********************99 PP

  Uso1_p115_head 311 al 312
                     ++
      EPX70770.1 630 SI 631
                     87 PP

>> Uso1_p115_C  Uso1 / p115 like vesicle tethering protein, C terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.9      0.93   1.8e+03      49      83 ..     653     691 ..     634     692 .. 0.71
   2 ?   -0.9   8.6         1   2.1e+03       8      60 ..     688     749 ..     646     781 .. 0.60
   3 ?    0.1  20.7      0.51     1e+03      17      83 ..     788     880 ..     777     890 .. 0.65
   4 ?    0.4  23.3       0.4     8e+02       6      77 ..     889     958 ..     877     970 .. 0.56
   5 !   22.0  33.8   8.2e-08   0.00016       8     120 ..     961    1093 .]     946    1093 .] 0.71

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.93
  Uso1_p115_C  49 eleaenkklekeleklraelkeekekekek....qkEld 83 
                  e++++ + +ekel ++++ l++  ++++++    ++El+
   EPX70770.1 653 EVQQKLINVEKELAETKQFLSTITSDKEKEvggfKSELE 691
                  566666777778888877777766555433677777776 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 1
  Uso1_p115_C   8 seaaslkdeneklkaelqslskalesleqk.....eakkaaesqakeleaenkklek....e 60 
                  se ++ ++  ++l+  +++ +++l sl+q+      ++  ++s+a+++e+e+k l++    e
   EPX70770.1 688 SELEEKQNFINELQVLTDEFRQELSSLRQSlydikIELDYSKSNASSMEEEMKVLREghdiE 749
                  33333333444444444444444444444444443345566666666666666666655552 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.51
  Uso1_p115_C  17 neklkaelqslskalesleqk.eakkaaesqakeleaenkklekeleklraelkeekekekek.........................qkEld 83 
                   ek+++elqsl+++  sle+k +++ + +++ +++ a++k++ +e +kl++ l+++ +k++                           +kEl+
   EPX70770.1 788 LEKTNNELQSLKSEKSSLEKKvNELTEKNQGLNKTVASMKSSLNESQKLEKSLAQQIQKKDHLlskhsdekssyenrikgldlenstiRKELE 880
                  456677777777777777777666666677777777777888888888888888877777643544444444444445555555555555555 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.4
  Uso1_p115_C   6 leseaaslkdeneklkaelqslskalesleqkeakkaaesqakeleaenkklekeleklraelkeekekeke 77 
                  l +e ++ +++ ++  +el+ ++++++s ++k  ++++++ +k  e+++++le+el+k +  +k+ +e+ + 
   EPX70770.1 889 LTEELKNTQNVLKQQSNELKLAKQKYNSCQEK--LNSNSQSSKASEKKISSLENELKKEKGIAKKLQEELDS 958
                  33334444444444445555555555555555..66666666677777777777777777666666666554 PP

  == domain 5  score: 22.0 bits;  conditional E-value: 8.2e-08
  Uso1_p115_C    8 seaaslkdeneklkaelqslskalesleqk......eakkaaesqakeleaenkklekeleklraelkeekekekek..............qkEld 83  
                   se++ lk+e ++ +++ +++++a + ++ +      + + + ++ +k+le+en k++++ e lr+++ + + k +++               kE +
   EPX70770.1  961 SEVQRLKNEITEGESSRSASQSAQNVQK-EeikklkSDLDKLQKTNKTLEEENFKSKNACEGLRKKVTDLEAKDNQTtaelqrqntelekkVKEAE 1055
                   3444444544444443332222222222.1344666666677777888899999999999999999998888888888999999999998856666 PP

  Uso1_p115_C   84 D.LLlllgDleeKvekykarLkelGeevsddedddedd 120 
                   +  Ll++  le+K++++k+ Lk+lG evs+de+++++d
   EPX70770.1 1056 EyWLLIIEELESKRSRDKKVLKQLGHEVSEDENESDED 1093
                   6369999***************************9997 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4  12.8   5.3e-05       0.1     167     279 ..     649     761 ..     645     780 .. 0.86
   2 ?    3.7  21.7     0.012        24     156     262 ..     751     856 ..     729     866 .. 0.76
   3 !   11.0  27.4   7.3e-05      0.14     150     276 ..     843     971 ..     841     977 .. 0.82
   4 !    4.9  22.4    0.0051        10     163     260 ..     950    1050 ..     948    1057 .. 0.86
   5 ?   -2.1   0.0       0.7   1.4e+03      66      91 ..    1061    1086 ..    1056    1088 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 5.3e-05
        Spc7 167 ellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeaervleeckgwse 265
                 ++++e++++  ++e+el++ +++   ++s +++e+  +++el+e ++ i+e++  ++e +++l +l++++ ++k + +  +++ ++ e+ ++  ++  +
  EPX70770.1 649 SAYEEVQQKLINVEKELAETKQFLSTITSDKEKEVGGFKSELEEKQNFINELQVLTDEFRQELSSLRQSLYDIKIELDYSKSNASSMEEEMKVLREGHD 747
                 57899*********************************************************************9999888888887777777777777 PP

        Spc7 266 sevsrlkeevkale 279
                  e++  +ee ++l 
  EPX70770.1 748 IEIKDFTEENERLR 761
                 77777777666664 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.012
        Spc7 156 elLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeae 254
                 +  ++++e l  ll++++ +++ ++ + ++l +  ++le+ +++eL++l++e ++l+++++e+ ++ + l++ +++ +++++e ++  ++l ++i++++
  EPX70770.1 751 KDFTEENERLRVLLESTKDQFKVISIKNKDLYATIQDLEK-TNNELQSLKSEKSSLEKKVNELTEKNQGLNKTVASMKSSLNESQKLEKSLAQQIQKKD 848
                 4445666677777777777777777777777777777666.5678999999999999999999999999999999999999999999999999999999 PP

        Spc7 255 rvleeckg 262
                 ++l ++ +
  EPX70770.1 849 HLLSKHSD 856
                 88887665 PP

  == domain 3  score: 11.0 bits;  conditional E-value: 7.3e-05
        Spc7 150 gleedkelLekqeeeldellpe...leeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkse 245
                 ++++ + lL+k+ +e +++ ++   l+ e +++++ele+l+e +     +  eeL+++++ l+++++e++  k++++++qe+l++ +++ ++ ++++s+
  EPX70770.1 843 QIQKKDHLLSKHSDEKSSYENRikgLDLENSTIRKELEELRESK----GSLTEELKNTQNVLKQQSNELKLAKQKYNSCQEKLNSNSQSSKASEKKISS 937
                 67777888888888887777761114568889999999999944....56788********************************************** PP

        Spc7 246 leeeiaeaerv...leeckgwsesevsrlkeevk 276
                 le+e+++++ +   l+e+ ++s+sev+rlk+e  
  EPX70770.1 938 LENELKKEKGIakkLQEELDSSTSEVQRLKNEIT 971
                 *******9977111455567999*******9976 PP

  == domain 4  score: 4.9 bits;  conditional E-value: 0.0051
        Spc7  163 eeldellpeleeekaeleeeleklqe...aaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeaerv 256 
                  ++l+e l++ ++e ++l++e+++ ++   a+++ ++++kee+++l+++l++l+++ + +++e  + ++  e l++k+++l+++ +++ +e+++++  
  EPX70770.1  950 KKLQEELDSSTSEVQRLKNEITEGESsrsASQSAQNVQKEEIKKLKSDLDKLQKTNKTLEEENFKSKNACEGLRKKVTDLEAKDNQTTAELQRQNTE 1046
                  577888888888888888888877765557777888********************************************************99888 PP

        Spc7  257 leec 260 
                  le++
  EPX70770.1 1047 LEKK 1050
                  8765 PP

  == domain 5  score: -2.1 bits;  conditional E-value: 0.7
        Spc7   66 screLkkyisegrkiireieeetlee 91  
                  +++eL+++ s+ +k+++++  e+ e+
  EPX70770.1 1061 IIEELESKRSRDKKVLKQLGHEVSED 1086
                  6899**************99999886 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7  13.7    0.0024       4.7      11     131 ..     651     769 ..     647     771 .. 0.78
   2 ?   14.1  19.4   2.6e-05     0.052       9     126 ..     741     865 ..     739     867 .. 0.87
   3 ?    3.9   7.7     0.036        72      53     106 ..     862     915 ..     861     915 .. 0.90
   4 ?    9.2  26.6   0.00085       1.7      14     123 ..     900    1009 ..     896    1012 .. 0.95
   5 ?    1.2  20.8      0.24   4.8e+02      26     104 ..     992    1060 ..     987    1092 .. 0.60

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0024
      APG6_N  11 leeldkqleqaekerdaYeeflkklkkekkeeek.qdeeleeleeeleklekeeeelleeLkelekereeleaelaaleeelealeeeeerfwreynel 108
                  ee++++l ++eke  + ++fl++++++k++e    ++elee ++ + +l+   +e  +eL  l +   +++ el   ++ ++ +eee  + +re +  
  EPX70770.1 651 YEEVQQKLINVEKELAETKQFLSTITSDKEKEVGgFKSELEEKQNFINELQVLTDEFRQELSSLRQSLYDIKIELDYSKSNASSMEEE-MKVLREGH-- 746
                 6899**********************99777544888999999999999999999999999999999999999999888888877654.55555555.. PP

      APG6_N 109 qlelleleeeldsleaqyehaqn 131
                 ++e +++ ee + l + +e +++
  EPX70770.1 747 DIEIKDFTEENERLRVLLESTKD 769
                 55555666666666555555555 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 2.6e-05
      APG6_N   9 lLleeldkqleqaekerdaYeeflkklkkekkeeek..........qdeeleeleeeleklekeeeelleeLkelekereeleaelaaleeelealeee 97 
                 +L e+ d ++++ ++e + ++  l+  k++ k              + ++le++++el+ l++e+++l+++ +el ++++ l++ +a+ ++ l++ ++ 
  EPX70770.1 741 VLREGHDIEIKDFTEENERLRVLLESTKDQFK---VisiknkdlyaTIQDLEKTNNELQSLKSEKSSLEKKVNELTEKNQGLNKTVASMKSSLNESQKL 836
                 56667777778888888888888888887733...1445778888888999************************************************ PP

      APG6_N  98 eerfwreynelqlelleleeeldsleaqy 126
                 e+   ++ +++++ l+++ +e+ s e+++
  EPX70770.1 837 EKSLAQQIQKKDHLLSKHSDEKSSYENRI 865
                 **************************997 PP

  == domain 3  score: 3.9 bits;  conditional E-value: 0.036
      APG6_N  53 eeeleklekeeeelleeLkelekereeleaelaaleeelealeeeeerfwreyn 106
                 e++++ l+ e ++  +eL+el + + +l +el++ ++ l++  +e +   ++yn
  EPX70770.1 862 ENRIKGLDLENSTIRKELEELRESKGSLTEELKNTQNVLKQQSNELKLAKQKYN 915
                 56789999999**************************99999999988888887 PP

  == domain 4  score: 9.2 bits;  conditional E-value: 0.00085
      APG6_N   14 ldkqleqaekerdaYeeflkklkkekkeeekqdeeleeleeeleklekeeeelleeLkelekereeleaelaaleeelealeeeeerfwreynelql 110 
                  l++q ++++  +++Y+++ +kl++++++++++++++ +le+el+k +   ++l+eeL+   +e ++l++e+ + e+  +a +  ++   +e ++l+ 
  EPX70770.1  900 LKQQSNELKLAKQKYNSCQEKLNSNSQSSKASEKKISSLENELKKEKGIAKKLQEELDSSTSEVQRLKNEITEGESSRSASQSAQNVQKEEIKKLKS 996 
                  899999*******************999999****************************************************************** PP

      APG6_N  111 elleleeeldsle 123 
                  +l +l++  + le
  EPX70770.1  997 DLDKLQKTNKTLE 1009
                  ******9998887 PP

  == domain 5  score: 1.2 bits;  conditional E-value: 0.24
      APG6_N   26 daYeeflkklkkekkeeekqdeeleeleeeleklekeeeelleeLkelekereeleaelaaleeelealeeeeerfwre 104 
                  +++++ l+kl+          +  + leee  k +++ e l ++  +le+++ +  ael+ +  ele++ +e e++w  
  EPX70770.1  992 KKLKSDLDKLQ----------KTNKTLEEENFKSKNACEGLRKKVTDLEAKDNQTTAELQRQNTELEKKVKEAEEYWLL 1060
                  33333333333..........3446677777777888888888888888888888888888888888888888888864 PP

>> ORF11CD3  ORF11CD3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.4     0.014        29       1      22 [.     713     734 ..     713     737 .. 0.95
   2 ?    9.0   0.3   0.00073       1.5      26      49 ..     794     817 ..     793     819 .. 0.92
   3 ?   -1.9   0.0       1.9   3.7e+03      26      44 ..     850     868 ..     849     870 .. 0.91

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.014
    ORF11CD3   1 SlmaefneaviElkkqkaiASl 22 
                 Sl++ ++ ++iEl+  k  AS+
  EPX70770.1 713 SLRQSLYDIKIELDYSKSNASS 734
                 9*******************97 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00073
    ORF11CD3  26 gLsewKqkKpqltqkveeLeeklQ 49 
                 +L+  K  K+ l++kv+eL ek Q
  EPX70770.1 794 ELQSLKSEKSSLEKKVNELTEKNQ 817
                 68889*****************99 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 1.9
    ORF11CD3  26 gLsewKqkKpqltqkveeL 44 
                 +Ls++   K+  + ++++L
  EPX70770.1 850 LLSKHSDEKSSYENRIKGL 868
                 6999************998 PP

>> Filament  Intermediate filament protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2  27.8   2.5e-05      0.05      84     289 ..     651     851 ..     617     853 .. 0.75
   2 ?    5.6  11.0    0.0051        10     196     284 ..     815     906 ..     812     909 .. 0.87
   3 ?    1.2  16.4      0.11   2.2e+02     186     278 ..     876     970 ..     869     974 .. 0.83
   4 ?    3.2  17.2     0.028        56      29     286 ..     965    1048 ..     949    1059 .. 0.44
   5 ?    0.8   1.3      0.15     3e+02     181     220 ..    1046    1085 ..    1038    1091 .. 0.66

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.5e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXX.......XXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXX CS
    Filament  84 ledlrkkyekelnkreevEaelkalr.......kdl.deatlarvdLekkvesLkeelaflkkvheeEvkelqkqvseqvlvevdaarkld..Lteilk 172
                 +e++++k         +vE+el++ +        d  +e    +++Le+k +   +el++l   + +E++ l++++  ++++e+d +++    ++e +k
  EPX70770.1 651 YEEVQQK-------LINVEKELAETKqflstitSDKeKEVGGFKSELEEK-QNFINELQVLTDEFRQELSSLRQSL-YDIKIELDYSKSNAssMEEEMK 740
                 3333333.......3344444444442222222222023334699***99.566679*******************.8888888876655456****** PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Filament 173 eiraqyeelaeknreeaeewykskleelqeaaeknsealrsakeeitelrrqiqsleieleslkkqkasleaqlaeleerleaeleklqeklseleeel 271
                  +r+ ++  +++ +ee e     +l  l e+ + + + ++  ++++  + + +++ + el+slk++k+sle++++el e+ +   +++ ++ s+l +e 
  EPX70770.1 741 VLREGHDIEIKDFTEENE-----RLRVLLESTKDQFKVISIKNKDLYATIQDLEKTNNELQSLKSEKSSLEKKVNELTEKNQGLNKTVASMKSSL-NES 833
                 **************9987.....57888888888899999999999999999**************************99988777776666666.567 PP

                 HHHHHHHHHHHHHHHHHH CS
    Filament 272 aeireemarqlreYqeLL 289
                 +++ + +a+q++  ++LL
  EPX70770.1 834 QKLEKSLAQQIQKKDHLL 851
                 899999999999888887 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.0051
                 XXXXXXXXXXXXXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Filament 196 kleelqeaaeknsealrsakeeitelrrqiqsleieleslkkqkasleaqlaele...erleaeleklqeklseleeelaeireemarqlre 284
                 k + l++++++ +++l+++++  + l +qiq++ + l+++  +k+s+e++++ l+    ++ +ele+l+e+  +l eel+++++ +++q +e
  EPX70770.1 815 KNQGLNKTVASMKSSLNESQKLEKSLAQQIQKKDHLLSKHSDEKSSYENRIKGLDlenSTIRKELEELRESKGSLTEELKNTQNVLKQQSNE 906
                 6778999999999999999999999*************************996542224678999********************9999988 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.11
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHH CS
    Filament 186 reeaeewykskleelqeaaeknsealrsakeeitelrrqiqsleieleslkkqkasleaqlaeleerleae...leklqeklseleeelaeireem 278
                 r+e+ee  +sk   l+e+ ++ ++ l++  +e++ ++++ +s + +l+s  +++++ e++++ le++l++e   ++klqe+l++  +e++++++e+
  EPX70770.1 876 RKELEELRESK-GSLTEELKNTQNVLKQQSNELKLAKQKYNSCQEKLNSNSQSSKASEKKISSLENELKKEkgiAKKLQEELDSSTSEVQRLKNEI 970
                 78888887777.5789999999999****************************************9999983334667777777777888888876 PP

  == domain 4  score: 3.2 bits;  conditional E-value: 0.028
                  XXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
    Filament   29 eLeakieeleekksaevsklkelyekeleelrkqldeltkerarlqleldnlreeledlrkkyekelnkreevEaelkalrkdldeatlarvdLekk 125 
                  +L+++i+e e  +sa++s  +++ ++e+++l++ ld+l+k ++ l+                                                   
  EPX70770.1  965 RLKNEITEGESSRSASQS-AQNVQKEEIKKLKSDLDKLQKTNKTLE--------------------------------------------------- 1009
                  233333333333222222.333333333333333333333333333................................................... PP

                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-HHHHHHHH CS
    Filament  126 vesLkeelaflkkvheeEvkelqkqvseqvlvevdaarkldLteilkeiraqyeelaeknreeaeewykskleelqeaaeknsealrsakeeitelr 222 
                                                                                                                   
  EPX70770.1    - -------------------------------------------------------------------------------------------------    -
                  ................................................................................................. PP

                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Filament  223 rqiqsleieleslkkqkasleaqlaeleerleaeleklqeklseleeelaeireemarqlreYq 286 
                                           e + + +++ e l++k+++le++ +++ +e++rq++e +
  EPX70770.1 1010 -------------------------EENFKSKNACEGLRKKVTDLEAKDNQTTAELQRQNTELE 1048
                  .........................333344455555555555555555555555555555543 PP

  == domain 5  score: 0.8 bits;  conditional E-value: 0.15
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-HHHHHH CS
    Filament  181 laeknreeaeewykskleelqeaaeknsealrsakeeite 220 
                    ek+ +eaee++   +eel+++ +++++ l++  +e++e
  EPX70770.1 1046 ELEKKVKEAEEYWLLIIEELESKRSRDKKVLKQLGHEVSE 1085
                  3455667777777777888888888888777777777776 PP

>> Fez1  Fez1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   9.2    0.0017       3.3      39     150 ..     650     770 ..     627     779 .. 0.75
   2 ?    6.5  18.2    0.0052        10      64     155 ..     784     890 ..     772     897 .. 0.72
   3 ?    1.2  39.4      0.22   4.5e+02       3     146 ..     898    1053 ..     896    1092 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0017
        Fez1  39 qlrelrakleekeeeikeleesl....eektlelevcenelqrkkseaellrekvekleeelkelreelselsleeeeaa....lesdeakaqrqe.ae 128
                    e+++kl + e+e+ e+++ l    ++k++e+   ++el++k++  + l+  ++++ +el++lr++l + + e + ++    ++ +e+k+ r+    
  EPX70770.1 650 AYEEVQQKLINVEKELAETKQFLstitSDKEKEVGGFKSELEEKQNFINELQVLTDEFRQELSSLRQSLYDIKIELDYSKsnasSMEEEMKVLREGhDI 748
                 5678889998888888887765511116788999999*******999999999999***********99998876655553332333333433332477 PP

        Fez1 129 eleelkreverlraeLkeerqk 150
                 e+++ ++e erlr  L+  +++
  EPX70770.1 749 EIKDFTEENERLRVLLESTKDQ 770
                 8999999999999999888776 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0052
        Fez1  64 ktlelevcenelqrkkseaellrekvekleeelkelreelselsleeeeaa..lesdeakaqrqe.............aeeleelkreverlraeLkee 147
                   ++le+ +nelq  kse++ l++kv++l e+ ++l +++++++++ +e++  ++s +++ q+++             +++++ l+ e   +r+eL+e 
  EPX70770.1 784 TIQDLEKTNNELQSLKSEKSSLEKKVNELTEKNQGLNKTVASMKSSLNESQklEKSLAQQIQKKDhllskhsdekssyENRIKGLDLENSTIRKELEEL 882
                 557899******************************999888776665555443333333333336666666666666777888888888888888888 PP

        Fez1 148 rqkkeeqa 155
                 r++k + +
  EPX70770.1 883 RESKGSLT 890
                 87766555 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.22
        Fez1    3 WevcQksGEislLKqQLkdsqaevtqklseivalkaqlrelrakleekeeeikeleesleektlelevcenelqrkkseaellrekvekleeelkel 99  
                    + Q+s E+ l Kq    +q  +++  +   a   ++  l+++l+++   +k+l+e+l++ t e+++++ne+ + +s+ +  +  ++  +ee+k+l
  EPX70770.1  898 NVLKQQSNELKLAKQKYNSCQEKLNSNSQSSKASEKKISSLENELKKEKGIAKKLQEELDSSTSEVQRLKNEITEGESSRSASQSAQNVQKEEIKKL 994 
                  5678************************************************************************999999999999999999999 PP

        Fez1  100 reelselsleeeeaa..........lesdeakaqrqe............aeeleelkreverlraeLke 146 
                  +++l +l++++++ +          +                       +++++el+r+  +l++++ke
  EPX70770.1  995 KSDLDKLQKTNKTLEeenfksknacE----------GlrkkvtdleakdNQTTAELQRQNTELEKKVKE 1053
                  99999977665555434443333330..........132223333222233333333333333332222 PP

>> Golgin_A5  Golgin subfamily A member 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   1.3     0.006        12     116     160 ..     651     695 ..     643     700 .. 0.87
   2 ?   -3.8  29.3       3.5     7e+03       5     194 ..     661     859 ..     657     860 .. 0.48
   3 ?    3.8  18.0     0.017        34      58     161 ..     783     885 ..     765     891 .. 0.79
   4 ?    6.7  30.2    0.0022       4.4      16     166 ..     841     981 ..     838     994 .. 0.70
   5 ?    5.6  15.4    0.0047       9.3      42     130 ..     991    1083 ..     979    1092 .. 0.73

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.006
   Golgin_A5 116 lerlkeelryleeelvrskatlqsrikdrekeieklrnqlttksl 160
                  e+++++l  +e+el ++k+ l +   d+eke+   +++l  k++
  EPX70770.1 651 YEEVQQKLINVEKELAETKQFLSTITSDKEKEVGGFKSELEEKQN 695
                 578899999999999999999999999999999999999998875 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 3.5
   Golgin_A5   5 akqeledYKqkAarILQsKekliasLkegsgeeglesstalsaeldelkqerdllreelqklnqqieqlrtelqdleaqqq.......aeaeslreqlq 96 
                 + +el++ Kq  + I  +Kek +   k++  ee+ +  ++l++  de +qe   lr++l + +++++  +++   +e++++        e++ + e+++
  EPX70770.1 661 VEKELAETKQFLSTITSDKEKEVGGFKSE-LEEKQNFINELQVLTDEFRQELSSLRQSLYDIKIELDYSKSNASSMEEEMKvlreghdIEIKDFTEENE 758
                 56899999999999999999999999955.577777778888888888888888888888888888877777666665443111111134443333333 PP

   Golgin_A5  97 eleeqleeerkake...eveaelerlkeelryleeelvrskatlqsrikdrekeieklrnqlttk.slsssseselesRlkqLtesLiqKQtvlEalst 191
                 +l+  le+ + + +     +++l  + ++l+ +++el+  k++ +s ++++ +e+ + ++ l +  +  +ss +e+++  k+L +++ +K  +l + s 
  EPX70770.1 759 RLRVLLESTKDQFKvisIKNKDLYATIQDLEKTNNELQSLKSE-KSSLEKKVNELTEKNQGLNKTvASMKSSLNESQKLEKSLAQQIQKKDHLLSKHSD 856
                 3332222222222200022233333333333333333322211.1222222222222222222211111223333333335566665566666666666 PP

   Golgin_A5 192 ekn 194
                 ek+
  EPX70770.1 857 EKS 859
                 666 PP

  == domain 3  score: 3.8 bits;  conditional E-value: 0.017
   Golgin_A5  58 llreelqklnqqieqlrtelqdleaqqqaeaeslreqlqeleeqleeerkakeeveaelerlkeelryleeelvrskatlqsrikdrekeieklrnqlt 156
                 ++ ++l+k+n+++++l++e   le+++ +e  + ++ l++    ++++ ++++++e+ l+++ ++ + l + ++ +k+++++rik  + e + +r++l 
  EPX70770.1 783 ATIQDLEKTNNELQSLKSEKSSLEKKV-NELTEKNQGLNKTVASMKSSLNESQKLEKSLAQQIQKKDHLLSKHSDEKSSYENRIKGLDLENSTIRKELE 880
                 334889999999999999988888877.77777788888888888888889999999999999999999999999999999999999999999999887 PP

   Golgin_A5 157 tksls 161
                     s
  EPX70770.1 881 ELRES 885
                 65555 PP

  == domain 4  score: 6.7 bits;  conditional E-value: 0.0022
   Golgin_A5  16 AarILQsKekliasLkegsgeeglesstalsaeldelkqerdllreelqklnqqieqlrtelqdleaqqqaeaeslreqlqeleeqleeerkakeevea 114
                 A++I Q+K++l+++  +++   ++  ++++ ++l++ + +++l  eel ++++++ +  ++ q++ +qq++e + ++++ ++ +e+l+++++++++ e+
  EPX70770.1 841 AQQI-QKKDHLLSKHSDEK---SSYENRIKGLDLENSTIRKEL--EELRESKGSLTEELKNTQNVLKQQSNELKLAKQKYNSCQEKLNSNSQSSKASEK 933
                 5555.99999988655444...333345555666665555544..455555555544333448888999****************************** PP

   Golgin_A5 115 elerlkeelryleeelvrskatlqsrikdrekeieklrnqlttkslsssses 166
                 ++++l++el+  +       ++lq+++    +e+++l+n++t  + s s  +
  EPX70770.1 934 KISSLENELKKEKGIA----KKLQEELDSSTSEVQRLKNEITEGESSRSASQ 981
                 ********98655433....467888888889*********98765554322 PP

  == domain 5  score: 5.6 bits;  conditional E-value: 0.0047
   Golgin_A5   42 stalsaeldelkqerdllreelqklnqqieqlrtelqdleaqqqaeaeslreqlqeleeqleeerkak....eeveaelerlkeelryleeel 130 
                   ++l+ +ld+l++ +++l+ee  k+++++e lr+++ dlea+ ++ + +l+ q++ele++++e ++      ee+e++ +r k+ l+ l  e+
  EPX70770.1  991 IKKLKSDLDKLQKTNKTLEEENFKSKNACEGLRKKVTDLEAKDNQTTAELQRQNTELEKKVKEAEEYWlliiEELESKRSRDKKVLKQLGHEV 1083
                  34578899***************************************************9998877651111444444445555555555555 PP

>> ATG16  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   3.7    0.0061        12      98     165 ..     652     716 ..     645     732 .. 0.90
   2 ?    2.8   8.2     0.059   1.2e+02      93     184 ..     728     819 ..     713     819 .. 0.53
   3 ?    8.2  13.4    0.0013       2.6      73     147 ..     778     852 ..     765     856 .. 0.87
   4 ?    7.3  24.7    0.0025       4.9      62     167 ..     851     963 ..     837     966 .. 0.77
   5 ?    5.2  27.8     0.011        22      70     181 ..     901    1012 ..     891    1014 .. 0.90
   6 ?    3.6  19.3     0.035        70      64     144 ..     975    1056 ..     959    1060 .. 0.72
   7 ?    0.2   7.2      0.38   7.5e+02      88     133 ..    1035    1084 ..    1015    1091 .. 0.53

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0061
       ATG16  98 gelaqrllelneelqkleeklkedeerlaeleaeraaletklkdreeelrekeklvqdlqDElsaLql 165
                 +e +q+l+++++el++ ++ l++ ++   + e+e+   + +l+++++ ++e++ l ++++ Els+L+ 
  EPX70770.1 652 EEVQQKLINVEKELAETKQFLSTITS---DKEKEVGGFKSELEEKQNFINELQVLTDEFRQELSSLRQ 716
                 689*************9999988775...7889********************************985 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.059
       ATG16  93 lyksrgelaqrllelneelqkleeklkedeerlaeleaeraaletklkdreeelrekeklvqdlqDElsaLqlqlnqaEeklrklekENkeL 184
                 +    + +++  + l e ++   +  +e++erl+ l ++ ++  + ++ +++ l    + +++   El++L+ + +++E+k ++l++ N+ L
  EPX70770.1 728 SKSNASSMEEEMKVLREGHDIEIKDFTEENERLRVLLESTKDQFKVISIKNKDLYATIQDLEKTNNELQSLKSEKSSLEKKVNELTEKNQGL 819
                 44444444444444444444444555555555554444333333333333333333333333555699999999999999999999999876 PP

  == domain 3  score: 8.2 bits;  conditional E-value: 0.0013
       ATG16  73 sakiqsleqklaqlreelaelyksrgelaqrllelneelqkleeklkedeerlaeleaeraaletklkdreeelr 147
                 ++++ ++ q l ++++el+ l  +++ l+++++el+e+ q l+++  +++++l+e ++  ++l ++++++++ l 
  EPX70770.1 778 NKDLYATIQDLEKTNNELQSLKSEKSSLEKKVNELTEKNQGLNKTVASMKSSLNESQKLEKSLAQQIQKKDHLLS 852
                 5566667788999999*************************************************9999999886 PP

  == domain 4  score: 7.3 bits;  conditional E-value: 0.0025
       ATG16  62 easasqsnskqsakiqsleqklaqlreelaelyksrgelaqrllelneelqkleeklk.......edeerlaeleaeraaletklkdreeelrekeklv 153
                 +++ s+++s+ +++i+ l+ + +++r+el+el  s+g l++ l+++++ l+++ ++lk       + +e+l++ +++ +a e+k++++e+el+  +   
  EPX70770.1 851 LSKHSDEKSSYENRIKGLDLENSTIRKELEELRESKGSLTEELKNTQNVLKQQSNELKlakqkynSCQEKLNSNSQSSKASEKKISSLENELKKEKGIA 949
                 2233336788999******************************99998888877765511111116677888888889999****************** PP

       ATG16 154 qdlqDElsaLqlql 167
                 ++lq+El++ + ++
  EPX70770.1 950 KKLQEELDSSTSEV 963
                 *******9987665 PP

  == domain 5  score: 5.2 bits;  conditional E-value: 0.011
       ATG16   70 skqsakiqsleqklaqlreelaelyksrgelaqrllelneelqkleeklkedeerlaeleaeraaletklkdreeelrekeklvqdlqDElsaLqlq 166 
                  ++qs++++  +qk  +++e l    +s   +++++ +l++el+k +  +k+ +e+l++ ++e+++l+ ++ + e      + + + +++E+  L+  
  EPX70770.1  901 KQQSNELKLAKQKYNSCQEKLNSNSQSSKASEKKISSLENELKKEKGIAKKLQEELDSSTSEVQRLKNEITEGESSRSASQSAQNVQKEEIKKLKSD 997 
                  5678889999999***********************************************************99999999999999999******** PP

       ATG16  167 lnqaEeklrklekEN 181 
                  l ++ +++++le+EN
  EPX70770.1  998 LDKLQKTNKTLEEEN 1012
                  **************9 PP

  == domain 6  score: 3.6 bits;  conditional E-value: 0.035
       ATG16   64 sasqsnskqsakiqsleqklaqlreelaelyksrgelaqrllelneelqkleeklk....edeerlaeleaeraaletklkdree 144 
                  s   s s++++  + +++++++l+++l +l+k++ +l++   + +++ + l++k +    +d+++ ael++++++le+k+k+ ee
  EPX70770.1  975 S---SRSASQSAQNVQKEEIKKLKSDLDKLQKTNKTLEEENFKSKNACEGLRKKVTdleaKDNQTTAELQRQNTELEKKVKEAEE 1056
                  1...223344555667899********************9999999988888876422226788899999999999999998876 PP

  == domain 7  score: 0.2 bits;  conditional E-value: 0.38
       ATG16   88 eelaelyksrgelaqrllelnee....lqkleeklkedeerlaeleaera 133 
                  +  ael+++++el+++++e++e     +++le+k ++d++ l++l +e++
  EPX70770.1 1035 QTTAELQRQNTELEKKVKEAEEYwlliIEELESKRSRDKKVLKQLGHEVS 1084
                  23455666666666666666664222245555555555555555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1093 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2923  (0.163032); expected 358.6 (0.02)
Passed bias filter:                      545  (0.0303977); expected 358.6 (0.02)
Passed Vit filter:                       238  (0.0132746); expected 17.9 (0.001)
Passed Fwd filter:                       121  (0.00674884); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 2.62u 0.44s 00:00:03.06 Elapsed: 00:00:00.84
# Mc/sec: 3920.98
//
Query:       EPX70771.1  [L=515]
Description: U4/U6 X U5 tri-snRNP complex subunit Prp3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.4e-67  225.8  10.5    9.6e-67  225.0  10.5    1.4  1  PRP3      pre-mRNA processing factor 3 (PRP3)
      2e-40  138.3   0.1      2e-40  138.3   0.1    2.0  3  DUF1115   Protein of unknown function (DUF1115)


Domain annotation for each model (and alignments):
>> PRP3  pre-mRNA processing factor 3 (PRP3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  225.0  10.5   1.1e-70   9.6e-67       2     223 .]     138     348 ..     137     348 .. 0.93

  Alignments for each domain:
  == domain 1  score: 225.0 bits;  conditional E-value: 1.1e-70
        PRP3   2 pyldprlkakvkkrkkralkfvekGkfikqaeqlrekaqleelkkeiaeeakkaglesdlklaekapkkeedevpndvEWWDavllkkkekkealkeee 100
                 py+dpr+k++ ++r  r l+ +  Gk+i++aeq r+++qleelkk++a +++kag++++l +++k++++    +p++vEWWD +++ ++  ++ ++++ 
  EPX70771.1 138 PYYDPRTKESRRTRAPRILSLNASGKYIEEAEQYRRQSQLEELKKRVALHSEKAGINDELLVTSKSIHR---VEPPNVEWWDLPYVANE-ATYGDQATW 232
                 7*******9999999*********************************************999888888...55669*********765.566665443 PP

        PRP3 101 kkkekeeeeesklkkitnyveHPvplkppkektkpaakplyLTkkErKklRrqrRkekekekqdkirlGLepppepKvklsNLmrvlgdeavqdPtkvE 199
                 k     e+++     it+ ++HP+p+ pp  k++p++k+l+LTkkE+Kk+Rrq+R+e++kekqd++ lGLepp++pKvklsNLm+vlgd a++dPtk+E
  EPX70771.1 233 K---IFENSD----TITSNIQHPIPVLPPYLKNQPSSKSLFLTKKEQKKIRRQTRAEARKEKQDRQLLGLEPPEPPKVKLSNLMSVLGDAAIKDPTKME 324
                 3...334444....8************************************************************************************ PP

        PRP3 200 aeVreqmaeRekkHeerNeeRklt 223
                 aeVr+q++eR+ +He++NeeRklt
  EPX70771.1 325 AEVRKQVEERRLRHEQMNEERKLT 348
                 **********************98 PP

>> DUF1115  Protein of unknown function (DUF1115)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.1       1.2   1.1e+04      75      87 ..     272     284 ..     253     293 .. 0.48
   2 ?   -4.5   0.6         2   1.8e+04      75      80 ..     338     343 ..     321     362 .. 0.43
   3 !  138.3   0.1   2.2e-44     2e-40       2     146 .]     372     505 ..     371     505 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 1.2
     DUF1115  75 keaakekkeeeek 87 
                 +++++++++ e +
  EPX70771.1 272 QKKIRRQTRAEAR 284
                 2222222222222 PP

  == domain 2  score: -4.5 bits;  conditional E-value: 2
     DUF1115  75 keaake 80 
                 +e+++e
  EPX70771.1 338 HEQMNE 343
                 222222 PP

  == domain 3  score: 138.3 bits;  conditional E-value: 2.2e-44
     DUF1115   2 vfriksLsnpkhrfkvdknAkqlsltGvvllgpkfnlvvveGgekaikkYkklmlrrikWteeeredeeeeeekeaakekkeeeekdedekeeekdlsn 100
                 vf+ik L+++ hr k+d nAkql+ltG+++l++k+nlvvveGg+k+ik++kklm++ri+Wt+++r       ++        + +k  d+++    +++
  EPX70771.1 372 VFKIKYLAHRPHRLKIDLNAKQLGLTGACILNDKINLVVVEGGRKNIKHFKKLMMNRIDWTDTSR-------NSL-----LAQGNKLADTNGIIIPYNE 458
                 9************************************************************8872.......111.....1222333445566778899 PP

     DUF1115 101 nkcelvweGevkkrnFkkwkfkeceteeearevLek.kgvehywdla 146
                 n+cel+weG + krnF+ w+f++c+te+ear  L++  + eh+w la
  EPX70771.1 459 NTCELIWEGDLSKRNFSYWTFRKCPTENEARLSLKQlGNTEHFWVLA 505
                 **********************************9955789999775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (515 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1147  (0.0639746); expected 358.6 (0.02)
Passed bias filter:                      493  (0.0274974); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 3445.52
//
Query:       EPX70772.1  [L=510]
Description: F-box protein Pof11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.3e-36  121.6  22.7    3.6e-06   27.6   0.1    6.9  7  WD40         WD domain, G-beta repeat
    1.8e-11   43.7   0.7    4.7e-11   42.4   0.7    1.8  1  F-box-like   F-box-like
    5.5e-09   36.2   0.1      0.038   14.3   0.0    4.4  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    3.1e-07   30.0   0.3    0.00051   19.5   0.0    3.1  3  WD40_like    WD40-like domain
    3.4e-07   29.3   1.6      0.022   13.4   0.0    4.0  4  Nup160       Nucleoporin Nup120/160
    3.6e-07   29.9   0.3    8.8e-07   28.7   0.3    1.7  1  F-box        F-box domain
  ------ inclusion threshold ------
      0.047   13.7   0.0       0.74    9.9   0.0    3.0  4  BBS2_Mid     Ciliary BBSome complex subunit 2, middle region
       0.13   11.8   0.1        5.7    6.4   0.0    2.6  1  PQQ_2        PQQ-like domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.7   1.1e-05     0.024      12      38 .]     227     251 ..     218     251 .. 0.88
   2 !   24.5   0.6   1.5e-08   3.4e-05       2      38 .]     256     293 ..     255     293 .. 0.94
   3 !   22.2   0.5     8e-08   0.00018       2      38 .]     298     333 ..     297     333 .. 0.89
   4 !   27.6   0.1   1.6e-09   3.6e-06       3      38 .]     343     379 ..     341     379 .. 0.89
   5 !   17.3   0.0   2.9e-06    0.0066       1      37 [.     383     418 ..     383     419 .. 0.85
   6 !   26.2   0.0   4.5e-09     1e-05       1      38 []     423     459 ..     423     459 .. 0.86
   7 ?   -2.0   0.0       3.5   7.9e+03      23      37 ..     485     499 ..     476     500 .. 0.72

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.1e-05
                 SEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  12 svtslafspdgawlasGsdDgtvriWd 38 
                 sv+++  + d ++++sGs+D+ + +Wd
  EPX70772.1 227 SVYCV--QYDDDYVVSGSKDRLISVWD 251
                 59999..889999*************9 PP

  == domain 2  score: 24.5 bits;  conditional E-value: 1.5e-08
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  +l+tl GH +sv +l+ +++ ++++sGs D ++ +W+
  EPX70772.1 256 ALLYTLHGHlGSVLCLQIDRHRDLIVSGSSDTSILVWS 293
                 5799************************99*******5 PP

  == domain 3  score: 22.2 bits;  conditional E-value: 8e-08
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  ++++ltGH ++v ++    +g++++s+s+D+t r+W+
  EPX70772.1 298 CPIKSLTGHtDNVLGV--IVSGKYIVSCSRDHTARVWK 333
                 5899*****666*999..88999**************6 PP

  == domain 4  score: 27.6 bits;  conditional E-value: 1.6e-09
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 c+++l+GH  sv+s++++  +  ++++s D+t+r+Wd
  EPX70772.1 343 CIHVLRGHlASVNSVQYDEASGVIVTASGDRTLRLWD 379
                 9**************88888888888877*******9 PP

  == domain 5  score: 17.3 bits;  conditional E-value: 2.9e-06
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 gqcl+++ +H  ++ +   + +g++++sGs D tvri+
  EPX70772.1 383 GQCLKVIYAHqRGIACS--QYNGKYIVSGSSDTTVRIF 418
                 79****9***6668444..79********99******7 PP

  == domain 6  score: 26.2 bits;  conditional E-value: 4.5e-09
                 TEEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 
                 g++lr+l GH + ++ l  + d+  ++sG++Dgt+r+W+
  EPX70772.1 423 GKLLRILQGHEDlIRTL--QFDNEKVVSGGYDGTIRVWN 459
                 6899******6679***..55666788***********8 PP

  == domain 7  score: -2.0 bits;  conditional E-value: 3.5
                 SEEEEEETTSEEEEE CS
        WD40  23 awlasGsdDgtvriW 37 
                 + +++++ +  + +W
  EPX70772.1 485 RRIIACTHNSEIFVW 499
                 445667559999999 PP

>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.4   0.7   2.1e-14   4.7e-11       5      47 ..      84     125 ..      80     126 .. 0.94

  Alignments for each domain:
  == domain 1  score: 42.4 bits;  conditional E-value: 2.1e-14
  F-box-like   5 PdEiLlqIFsyLppsdLlrlalVCrrWrrvaldtplLWrrlvl 47 
                 P+Ei l+IF +L+++dL+ +   ++rW+r+  d+ +LW++l+ 
  EPX70772.1  84 PEEIVLRIFTCLDQNDLCKCKTLSKRWKRLLEDP-SLWKTLYQ 125
                 ******************************9887.******96 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.29   6.5e+02      49      88 ..     234     272 ..     226     297 .. 0.80
   2 !   14.3   0.0   1.7e-05     0.038      16      87 ..     318     399 ..     306     402 .. 0.86
   3 !   13.9   0.0   2.2e-05      0.05      48      90 ..     401     442 ..     398     444 .. 0.90
   4 ?    3.2   0.0     0.048   1.1e+02      44      84 ..     439     477 ..     431     485 .. 0.76

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.29
  ANAPC4_WD40  49 dgklLavaysdgevrlldaesgkvvhslsvksekavtclg 88 
                  d+   + + +d  +++ d+++g ++ +l+ +  + v cl+
   EPX70772.1 234 DDDYVVSGSKDRLISVWDIHTGALLYTLHGHLGS-VLCLQ 272
                  6777788888889999999999999888877774.77765 PP

  == domain 2  score: 14.3 bits;  conditional E-value: 1.7e-05
  ANAPC4_WD40  16 dgellvfRlngqrvwtl...........eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtcl 87 
                  +  + ++R    rvw+l              ++  +v+s+++ +   +++ a  d ++rl d++sg++++ + +++   ++c 
   EPX70772.1 318 KYIVSCSRDHTARVWKLdtlpgenpcihVLRGHLASVNSVQYDEASGVIVTASGDRTLRLWDIYSGQCLKVIYAHQRG-IACS 399
                  556788899999999999999998888766788899***********************************9999984.8775 PP

  == domain 3  score: 13.9 bits;  conditional E-value: 2.2e-05
  ANAPC4_WD40  48 pdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                   +gk ++ + sd++vr+++a sgk+++ l+ +++  + +l++ 
   EPX70772.1 401 YNGKYIVSGSSDTTVRIFEAASGKLLRILQGHEDL-IRTLQFD 442
                  69***************************999995.8888875 PP

  == domain 4  score: 3.2 bits;  conditional E-value: 0.048
  ANAPC4_WD40  44 LaWkpdgklLavaysdgevrlldaesgkvvhslsvksekav 84 
                  L++  d++  + +  dg++r+ + e+g++   l+ ++ ++v
   EPX70772.1 439 LQF--DNEKVVSGGYDGTIRVWNFETGELYCVLQNDRRSRV 477
                  544..4455678889*************9988887777655 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.2   0.0    0.0049        11     192     232 ..     222     261 ..     218     282 .. 0.54
   2 ?    1.7   0.0     0.057   1.3e+02       6      63 ..     271     327 ..     266     336 .. 0.81
   3 !   19.5   0.0   2.3e-07   0.00051      10     111 ..     401     503 ..     395     510 .] 0.90

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.0049
   WD40_like 192 kidvegkPecillvddylivGgsfkyllliNiklnvntfkl 232
                 +i+++++  c+ + ddy+++G +   + +  i++    ++l
  EPX70772.1 222 RISTDSV-YCVQYDDDYVVSGSKDRLISVWDIHTGALLYTL 261
                 5555554.566666666666665555555555544444444 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.057
   WD40_like   6 idiskkgslilyGgkddkctvlkleslesvsivesfedSvifvklldddlilvvtlDG 63 
                 ++i+++ +li+ G+ d  + v + +  + + ++++ +d v+ v +++++ i+ ++ D 
  EPX70772.1 271 LQIDRHRDLIVSGSSDTSILVWSWQRRCPIKSLTGHTDNVLGV-IVSGKYIVSCSRDH 327
                 56777889999***************************99865.66777777777775 PP

  == domain 3  score: 19.5 bits;  conditional E-value: 2.3e-07
   WD40_like  10 kkgslilyGgkddkctvlkleslesvsivesfedSvifvklldddlilvvtlDGtillsllenee..evenekieedistvkviddklliGtnkGsiyv 106
                  +g++i+ G+ d ++++++  s+++  i+++ ed +    + d+++++ +  DGti    +e +e   v ++++   +   + ++ +++  t++ +i+v
  EPX70772.1 401 YNGKYIVSGSSDTTVRIFEAASGKLLRILQGHEDLIRTL-QFDNEKVVSGGYDGTIRVWNFETGElyCVLQNDRRSRVFGLQCDHRRIIACTHNSEIFV 498
                 589****************************99977655.56*********************9999999999999**********************9 PP

   WD40_like 107 fskdl 111
                 +  d 
  EPX70772.1 499 WRFDY 503
                 88775 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.1   0.0    0.0066        15     221     255 ..     227     260 ..     191     288 .. 0.83
   2 !    6.8   0.1     0.001       2.3     230     250 ..     317     337 ..     305     348 .. 0.88
   3 !   13.4   0.0   9.8e-06     0.022     229     260 ..     362     394 ..     350     450 .. 0.76
   4 ?    0.9   0.0     0.062   1.4e+02     239     252 ..     452     465 ..     436     475 .. 0.86

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.0066
                 EET.....TTTEEEEEETT-EEEEEETTTTEEEEE CS
      Nup160 221 vavavveigqtylfalsrdgkLrvWnlltgkclat 255
                  +  +v+ +++y+++ s d+ + vW++ tg +l+t
  EPX70772.1 227 SV-YCVQYDDDYVVSGSKDRLISVWDIHTGALLYT 260
                 33.48888**********************99998 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.001
                 TTEEEEEETT-EEEEEETTTT CS
      Nup160 230 qtylfalsrdgkLrvWnlltg 250
                  +y+++ srd++ rvW l+t+
  EPX70772.1 317 GKYIVSCSRDHTARVWKLDTL 337
                 579***************996 PP

  == domain 3  score: 13.4 bits;  conditional E-value: 9.8e-06
                 TTTEEEEEETT-EEEEEETTTTEEEEEEE--.. CS
      Nup160 229 gqtylfalsrdgkLrvWnlltgkclatidll.r 260
                 ++ +++++s d++Lr+W++ +g+cl +i+   r
  EPX70772.1 362 ASGVIVTASGDRTLRLWDIYSGQCLKVIYAHqR 394
                 6779***********************998742 PP

  == domain 4  score: 0.9 bits;  conditional E-value: 0.062
                 T-EEEEEETTTTEE CS
      Nup160 239 dgkLrvWnlltgkc 252
                 dg++rvWn +tg +
  EPX70772.1 452 DGTIRVWNFETGEL 465
                 9**********865 PP

>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.7   0.3   3.9e-10   8.8e-07       7      45 ..      84     122 ..      55     125 .. 0.79

  Alignments for each domain:
  == domain 1  score: 28.7 bits;  conditional E-value: 3.9e-10
                 -HHHHHHHHHTS-HHHHHHHCTT-HHHHHHHTTHHHHHH CS
       F-box   7 PsevlrhILerLplsdllalrrVSkgwrilidsdrlwck 45 
                 P+e+++ I+  L+  dl+ +   Sk+w++l+ +++lw++
  EPX70772.1  84 PEEIVLRIFTCLDQNDLCKCKTLSKRWKRLLEDPSLWKT 122
                 566**********************************87 PP

>> BBS2_Mid  Ciliary BBSome complex subunit 2, middle region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       3.5   7.9e+03      12      27 ..     235     250 ..     228     259 .. 0.77
   2 ?   -1.2   0.0      0.94   2.1e+03       5      27 ..     271     292 ..     267     297 .. 0.70
   3 ?   -2.7   0.0       2.6   5.9e+03      13      31 ..     318     336 ..     315     340 .. 0.81
   4 ?    9.9   0.0   0.00033      0.74      11      66 ..     402     459 ..     396     500 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 3.5
    BBS2_Mid  12 eneLvvgsddfeirvf 27 
                 ++++v gs+d  i v+
  EPX70772.1 235 DDYVVSGSKDRLISVW 250
                 4688999999988876 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.94
    BBS2_Mid   5 advdgdgeneLvvgsddfeirvf 27 
                 +++d++ ++ +v gs d +i v+
  EPX70772.1 271 LQIDRH-RDLIVSGSSDTSILVW 292
                 466665.5666779999999876 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 2.6
    BBS2_Mid  13 neLvvgsddfeirvfkeee 31 
                 +++v +s d + rv+k ++
  EPX70772.1 318 KYIVSCSRDHTARVWKLDT 336
                 5789999999999998776 PP

  == domain 4  score: 9.9 bits;  conditional E-value: 0.00033
    BBS2_Mid  11 geneLvvgsddfeirvfkee..elvaeitetekvvslarlekerfayaleNGtvgvye 66 
                 + +++v gs d ++r+f+    +l++ ++ +e  +   + ++e+ + +   Gt+ v++
  EPX70772.1 402 NGKYIVSGSSDTTVRIFEAAsgKLLRILQGHEDLIRTLQFDNEKVVSGGYDGTIRVWN 459
                 4579*************975448999****************************9987 PP

>> PQQ_2  PQQ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0    0.0025       5.7      35     142 ..     362     463 ..     316     500 .. 0.53

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0025
       PQQ_2  35 sggtlfvatgggrlvaldaatGkvlWettlegpvvgaplvaegrvvvvasdgqlialdaedGkrlWstqqrseepaelrssaspavagdtvvvgessgk 133
                 + g++++a+g ++l  +d  +G+ l    + ++  +    +++ +v  +sd +++ ++a++Gk+l    ++++e++     ++  ++ ++vv g+ +g 
  EPX70772.1 362 ASGVIVTASGDRTLRLWDIYSGQCLKVIYAHQRGIACSQYNGKYIVSGSSDTTVRIFEAASGKLLRI--LQGHEDLI----RTLQFDNEKVVSGGYDGT 454
                 3455555555555555555555555554443333333234444444444555555555555555433..11112222....233333333333333333 PP

       PQQ_2 134 lvaldpkdG 142
                 + + + ++G
  EPX70772.1 455 IRVWNFETG 463
                 333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (510 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       562  (0.0313459); expected 358.6 (0.02)
Passed bias filter:                      474  (0.0264376); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.63u 0.29s 00:00:00.92 Elapsed: 00:00:00.47
# Mc/sec: 3242.03
//
Query:       EPX70773.1  [L=1463]
Description: glutathione S-conjugate-exporting ATPase Abc4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.4e-47  161.7   0.5    2.2e-27   96.2   0.1    2.5  2  ABC_tran      ABC transporter
    1.9e-44  152.3  39.1    3.9e-26   92.3  11.9    2.7  2  ABC_membrane  ABC transporter transmembrane region
    2.8e-14   53.1   6.3    0.00018   21.0   0.1    4.1  2  SMC_N         RecF/RecN/SMC N terminal domain
    7.1e-07   29.9   0.1     0.0011   19.5   0.0    2.4  2  AAA_23        AAA domain
    8.3e-07   29.1  11.6       0.16   11.7   0.4    4.4  4  AAA_21        AAA domain, putative AbiEii toxin, Type IV TA s
    2.6e-06   27.4   0.1      0.002   18.0   0.0    2.5  2  RsgA_GTPase   RsgA GTPase
    2.6e-06   27.0   0.3      0.059   13.1   0.1    2.5  2  AAA_29        P-loop containing region of AAA domain
      4e-05   23.9   1.0       0.33   11.2   0.0    3.2  2  AAA_22        AAA domain
    4.3e-05   22.7   2.9      0.058   12.5   0.2    3.4  4  T2SSE         Type II/IV secretion system protein
    6.6e-05   23.4   0.2      0.053   13.9   0.0    2.5  2  AAA_16        AAA ATPase domain
    8.3e-05   22.7   1.6       0.41   10.8   0.1    2.5  2  MMR_HSR1      50S ribosome-binding GTPase
    8.7e-05   22.1   0.1       0.54    9.7   0.0    2.5  2  AAA_7         P-loop containing dynein motor region
    0.00019   21.8   0.4      0.066   13.6   0.0    3.4  2  AAA           ATPase family associated with various cellular 
    0.00079   19.0   0.4        0.5    9.9   0.0    2.8  2  AAA_25        AAA domain
     0.0014   18.0   0.0       0.46    9.8   0.0    2.3  2  FtsK_SpoIIIE  FtsK/SpoIIIE family
     0.0015   18.7   3.1       0.17   11.9   0.2    2.6  2  DUF87         Helicase HerA, central domain
     0.0036   17.0   0.0        0.3   10.8   0.0    2.4  2  AAA_24        AAA domain
     0.0047   16.7   0.3        6.7    6.4   0.0    3.1  3  IstB_IS21     IstB-like ATP binding protein
     0.0057   17.2   0.0        2.5    8.6   0.0    2.7  2  AAA_18        AAA domain
     0.0084   15.8   0.2        1.1    9.0   0.0    2.3  2  AAA_15        AAA ATPase domain
  ------ inclusion threshold ------
      0.015   15.5   0.1        1.7    8.8   0.1    2.6  2  AAA_33        AAA domain
      0.017   15.0   0.1       0.31   10.9   0.0    2.6  2  ATPase_2      ATPase domain predominantly from Archaea
      0.035   13.7   0.0      0.082   12.5   0.0    1.5  1  AAA_27        AAA domain
      0.037   14.1   2.3       0.45   10.5   0.3    2.6  2  Dynamin_N     Dynamin family
      0.038   14.0   1.9         19    5.2   0.0    3.8  3  AAA_5         AAA domain (dynein-related subfamily)
      0.043   13.5   0.6        1.4    8.6   0.0    2.5  2  AAA_30        AAA domain
       0.05   13.6   0.0         18    5.3   0.0    2.6  2  ResIII        Type III restriction enzyme, res subunit
      0.052   12.7   0.5        8.7    5.4   0.1    2.8  3  NB-ARC        NB-ARC domain
      0.057   12.7   0.1        2.3    7.5   0.0    2.3  2  Zeta_toxin    Zeta toxin
       0.09   12.4   3.3       0.85    9.2   0.6    2.4  2  cobW          CobW/HypB/UreG, nucleotide-binding domain
       0.11   12.0   0.1        3.7    7.0   0.0    2.4  2  PhoH          PhoH-like protein
       0.12   12.3   1.9        4.1    7.3   0.1    2.6  2  NACHT         NACHT domain
       0.13   12.0   0.2         27    4.5   0.0    3.0  3  DEAD          DEAD/DEAH box helicase
       0.14   11.3   0.2        3.9    6.6   0.0    2.2  2  DUF815        Protein of unknown function (DUF815)
        0.2   11.9   1.8         11    6.3   0.0    2.9  2  Roc           Ras of Complex, Roc, domain of DAPkinase
       0.21   11.3   0.9        7.3    6.3   0.1    2.5  2  PduV-EutP     Ethanolamine utilisation - propanediol utilisat
       0.27   11.0   1.4        5.6    6.7   0.3    2.4  2  ATP_bind_1    Conserved hypothetical ATP binding protein
       0.78    9.1   4.5         14    5.0   0.0    3.2  3  Pox_A32       Poxvirus A32 protein


Domain annotation for each model (and alignments):
>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.3   0.0   6.7e-20   3.2e-17       1     135 [.     631     766 ..     631     768 .. 0.86
   2 !   96.2   0.1   4.7e-30   2.2e-27       2     137 .]    1231    1385 ..    1230    1385 .. 0.87

  Alignments for each domain:
  == domain 1  score: 63.3 bits;  conditional E-value: 6.7e-20
                 EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH......HHHTCHHHHHHHST CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxx RF
    ABC_tran   1 lknvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren......esdeeiekalsklg 93 
                 l+++++k+ ++++  +vG++G+GK++L+++l+g+l+ t+G+                +k +++++q + l + + +++n       ++ + +++l+  g
  EPX70773.1 631 LRDLNFKFPKNQLSIVVGPTGSGKTSLISALLGELSLTSGSY-----------SLPRSKGVSYVSQVAWLRNAT-IKDNilfnsvFDETRYKDVLKACG 717
                 6899*************************************9...........3446899*******8887777.999999999866666777777777 PP

                 TGG.......TTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEEST CS
                 xxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  94 lke.......lkdtvvksspssLSgGqkqrvalarallkkpkllllDEp 135
                 l+         + t +++++ +LSgGqkqr+alara+   ++++l+D+ 
  EPX70773.1 718 LQSdlenlpaGDLTEIGEKGVTLSGGQKQRIALARAVYAPSSVILIDDV 766
                 77766666554456667888***************************85 PP

  == domain 2  score: 96.2 bits;  conditional E-value: 4.7e-30
                  EEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH................... CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................... RF
    ABC_tran    2 knvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren................... 79  
                  +n++l++++ ekvaivG++G+GKStL  +l++ ++   G++++++ ++++ +l+slr++i+++pq+p lf+++ vr+n                   
  EPX70773.1 1231 SNLNLHIHHAEKVAIVGRTGSGKSTLGLTLLRFTNRVGGSLRINDLEIEDVNLSSLRQRISFIPQDPILFSGT-VRSNldpfneledsllnealqts 1326
                  799**********************************************************************.******99986666655555443 PP

                  .HHHTCHHHHHHHSTTGG..............TTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                  .xxxxxxxxxxxxxxxxx..............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   80 .esdeeiekalsklglke..............lkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137 
                   +              ++                dt v+s++s++S+Gqkq +alara+++++k+++lDE+ta
  EPX70773.1 1327 gA--------------NKmaiaytedqqpihiNLDTQVSSEGSNFSQGQKQVLALARAIVRRSKIIILDECTA 1385
                  33..............334444444444555589999999*******************************96 PP

>> ABC_membrane  ABC transporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.2  14.1   4.6e-22   2.2e-19       7     273 ..     302     567 ..     290     568 .. 0.93
   2 !   92.3  11.9   8.3e-29   3.9e-26       1     269 [.     898    1159 ..     898    1164 .. 0.94

  Alignments for each domain:
  == domain 1  score: 70.2 bits;  conditional E-value: 4.6e-22
                   HHHHHHHHHHHHHHHHHHHHHHHHSSTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH..HHHHHHHHHHHHHHHHHHHHCSTHHHHHH....SCH CS
  ABC_membrane   7 lailagvlsplfplvlgrildtlldkgdpetealnvysllllllglaqfilallqsyll..nvtgerlskrlrrklfkkilrqpmsffdt....nsv 97 
                   ++++  +++++ p+ ++r+l+ l    ++++  l+ y +++lll+   + ++ +qsyl+  +    r  + l  +++kk+l    +f ++     +v
    EPX70773.1 302 ASFFISATQFISPVAMNRFLKYLEN-PKADY--LSPYVWIFLLLVGPFINSMAFQSYLFlsTRYTVRSYSVLVYQIYKKVLDF--RFVQNkneeSKV 393
                   6788889999999999999999965.77777..*************9999*********988899999999*********987..99999878889* PP

                   HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHH CS
  ABC_membrane  98 GellsrltndvsklrdglgeklglffqslltfvgglivmfylgwkltlvllailpliilvsaviakilkklkkkeqkavakassvaeEslsgirtVk 194
                   G++++++++d++++ ++    ++ +  ++ + ++++++  +lgw+ + v+l++++l   v +++++++ kl+   +ka++ +  ++ E l+ ir+ k
    EPX70773.1 394 GRVNNLISTDANDIGELRELIHVAVRAPFEIGISVYLLQKLLGWS-AYVGLVLAVLTTSVPILLGPFVAKLTLMSNKATDSRIELMSELLQSIRVTK 489
                   ********************************************8.8************************************************** PP

                   HTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSTHHHHHHHHHHHHHHHHH CS
  ABC_membrane 195 afgreeyflekfekaleeakkagikkaianglligitqllgllsyalalwfGttlvisgelsvgdlvvflslfailfga 273
                    fg+e+ +le+ +++++++ ++++k ++++ l+++  ++l+++s+++++ + ttl+  ++++++ +++ +slf+++ ++
    EPX70773.1 490 FFGWERPMLERVQEKRRYEIHRTWKLLLMEILIQVLVESLPFFSMFVTFIIFTTLMC-QKITPSIAFTSISLFNLVRNQ 567
                   ************************************************887777775.59**************98765 PP

  == domain 2  score: 92.3 bits;  conditional E-value: 8.3e-29
                    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTHHHHHHS CS
  ABC_membrane    1 liliillailagvlsplfplvlgrildtlldkgdpetealnvysllllllglaqfilallqsyllnvtgerlskrlrrklfkkilrqpmsffdtn 95  
                    +++i+ll+++++ ls+l+ l+ + ++++ +d+ d +    ++++ ++  ++++ ++l +l++y++ + +  + k ++++++++++    s+f+++
    EPX70773.1  898 VCIILLLLVVTQTLSILIDLWVAFWTNKSIDSPDMSN---TKFLFVYGTMLVLYCVLDYLRTYTYDKGSLIAAKNIHNSMLENVFGTYASWFNKT 989 
                    689***************************9766666...89999************************************************** PP

                    CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTH CS
  ABC_membrane   96 svGellsrltndvsklrdglgeklglffqslltfvgglivmfylgwkltlvllailpliilvsaviakilkklkkkeqkavakassvaeEslsgi 190 
                    ++G++++r+++d+++l+  l++ l+  +  +l++v+gl+ +    + + +  ++i+ l ++v ++++k    +k+  + ++++++ ++ Es+sg+
    EPX70773.1  990 PTGRIVNRFAKDIRSLDLNLPSWLFWSIECFLSIVAGLVSVSSAMPLFLVPAIIICSLGFYVGILYTKAQVGIKRLISVYNSPMFGLLGESISGL 1084
                    **********************************************99999******************************************** PP

                    HHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSTHHHHHHHHHHHHH CS
  ABC_membrane  191 rtVkafgreeyflekfekaleeakkagikkaianglligitqllgllsyalalwfGttlvisgelsvgdlvvflslfai 269 
                     +++af+++ +f+++f k++++  + +  + ++n+++ ++t+ ++ l+  la   G    +++ ls+g  v f++  ++
    EPX70773.1 1085 AVIRAFNMQGIFRSEFSKKIDNLMRLQTASYNLNRWVAIRTDGISGLVGGLA---GLIALKQSHLSPGL-VGFSLNQSV 1159
                    ********************************************99998888...77777778888888.444444444 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.1   3.9e-07   0.00018      23     210 ..     640     811 ..     629     818 .. 0.63
   2 !   19.6   3.2     1e-06   0.00048      26     209 ..    1242    1425 ..    1230    1432 .. 0.70

  Alignments for each domain:
  == domain 1  score: 21.0 bits;  conditional E-value: 3.9e-07
                 TSSEEEEEESTTSSHHHHHHHHHHHCTT.TTTTTTCHCCCCCC--BTTCSSTTEEEEEEEEEETTEESSSSSSCEEEEEEEETTSEEEEEETTEEE-HH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  23 sksftaivGpNGSGKsnlldAilFvLGersakklrseklsdlihkskekasvkkaeveitfdnedkklkiekeevsisrrvkrkgeseykingkevtkk 121
                 +++++++vGp GSGK++l+ A+l  L+ +s  +    + + + +  ++ a + +a+++             ++ +  +r +   +    + + ++    
  EPX70773.1 640 KNQLSIVVGPTGSGKTSLISALLGELSLTSG-SYSLPRSKGVSY-VSQVAWLRNATIKD--------NILFNSVFDETRYKDVLKACGLQSDLENLPAG 728
                 4568899999999999999999444443332.222222222222.23344444444432........22233333334444444445555566666666 PP

                 HHHHHHHCTT-STTCS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHH..HHCTTSEEEEE-SSHHHCCC-SCEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 122 evsellesagiskelLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellk..eksknaQfivislreemlekadklvg 210
                 +++e+    g +  +LSgG+k+ +ala       + p+++ l+D++ +aLD +  + + + l      +n  +i ++++ +++ +a +++ 
  EPX70773.1 729 DLTEI----GEKGVTLSGGQKQRIALA----RAVYAPSSVILIDDVMSALDIHTSNWIFRHLFqgPLMQNRTVILVTHSVNLFLDAASFIV 811
                 66554....334458******987765....56799****************999988877762456788999999999999988877664 PP

  == domain 2  score: 19.6 bits;  conditional E-value: 1e-06
                  EEEEEESTTSSHHHHHHHHHHHCTT.TTTTTTCHCC..CCCC--BTTCSSTTEEEEEEEEEETTEE...SSSSSSCEEEEEEEETTSEEEEEETTEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N   26 ftaivGpNGSGKsnlldAilFvLGersakklrsekl..sdlihkskekasvkkaeveitfdnedkk...lkiekeevsisrrvkrkgeseykingke 117 
                    aivG+ GSGKs l   +   + +r   +lr ++l  +d+  +s +++ +   +  i+f+ + ++      e e+  ++  ++++g ++++i  +e
  EPX70773.1 1242 KVAIVGRTGSGKSTLGLTL-LRFTNRVGGSLRINDLeiEDVNLSSLRQRISFIPQDPILFSGTVRSnldPFNELEDSLLNEALQTSGANKMAIAYTE 1337
                  5689999999999998777.44555555566665441145544422333333333344453322222212334456777778888888999998777 PP

                  E-HHHHHHHHHCTT-STTCS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC-SCEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  118 vtkkevsellesagiskelLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemlekadklv 209 
                   ++    +l  ++  + +++S G+k+++ala       v+++ + +lDe  a  D++  +++ + l+++  +a +++i++r +++ + +k++
  EPX70773.1 1338 DQQPIHINLDTQVSSEGSNFSQGQKQVLALAR----AIVRRSKIIILDECTASVDDTTDQQIQKTLRSAFGDATMLCIAHRLKTIVDYHKVM 1425
                  666555555566677789*********98764....4578999**************************************99988877766 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   2.3e-06    0.0011      11      39 ..     632     661 ..     627     697 .. 0.86
   2 !    7.8   0.1    0.0088       4.1      22      35 ..    1243    1256 ..    1230    1262 .. 0.89

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 2.3e-06
      AAA_23  11 rdqeidF.skgltlItGpNGaGKTTildAi 39 
                 rd ++ F ++ l +++Gp+G+GKT+++ A+
  EPX70773.1 632 RDLNFKFpKNQLSIVVGPTGSGKTSLISAL 661
                 6788888999*****************998 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0088
      AAA_23   22 tlItGpNGaGKTTi 35  
                  ++I+G +G+GK+T+
  EPX70773.1 1243 VAIVGRTGSGKSTL 1256
                  58***********8 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.4   0.00034      0.16       2      20 ..     644     662 ..     643     681 .. 0.85
   2 !   11.7   0.1   0.00036      0.17     237     302 ..     740     804 ..     680     805 .. 0.78
   3 ?    6.5   0.8     0.013       6.3       3      26 ..    1244    1270 ..    1243    1308 .. 0.67
   4 ?    3.8   0.0     0.088        42     236     265 ..    1356    1382 ..    1274    1388 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00034
      AAA_21   2 nvliGpNgsGKSnLLdald 20 
                  +++Gp gsGK++L+ al 
  EPX70773.1 644 SIVVGPTGSGKTSLISALL 662
                 689**************95 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 0.00036
      AAA_21 237 lSdGtkrllalltallralkkgsllliDEpEngLHPkllrrll.ell.kelsrngaQviltTHSpll.l 302
                 lS G+k+ +al+ a+++     s++liD++ + L+ +    ++  l+   l + +  vil+THS  l l
  EPX70773.1 740 LSGGQKQRIALARAVYAPS---SVILIDDVMSALDIHTSNWIFrHLFqGPLMQ-NRTVILVTHSVNLfL 804
                 6999999988888888766...*********************6666756666.899*******66635 PP

  == domain 3  score: 6.5 bits;  conditional E-value: 0.013
      AAA_21    3 vliGpNgsGKSnLLdaldllarl...d 26  
                  +++G+ gsGKS+L  +l  +       
  EPX70773.1 1244 AIVGRTGSGKSTLGLTLLRFTNRvggS 1270
                  79***********99995553223331 PP

  == domain 4  score: 3.8 bits;  conditional E-value: 0.088
      AAA_21  236 elSdGtkrllalltallralkkgsllliDE 265 
                  ++S+G+k++lal+ a+ r+    +++++DE
  EPX70773.1 1356 NFSQGQKQVLALARAIVRRS---KIIILDE 1382
                  45****************99...99****9 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   4.3e-06     0.002      92     137 ..     633     679 ..     619     692 .. 0.85
   2 ?    6.6   0.0     0.014       6.8      89     119 ..    1229    1260 ..    1212    1276 .. 0.79

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 4.3e-06
                  HHHHHCTT.SEEEEECSTTSSHHHHHHHHCTT-----S--------- CS
  RsgA_GTPase  92 elkellkd.ktsvlvGqSGvGKStLinallpelelktgevseklgrG 137
                  +l+ ++ + ++s++vG++G GK++Li all+el+l  g+ s   ++G
   EPX70773.1 633 DLNFKFPKnQLSIVVGPTGSGKTSLISALLGELSLTSGSYSLPRSKG 679
                  5666665559************************9999998877777 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.014
                   THHHHHHHCTT.SEEEEECSTTSSHHHHHHHH CS
  RsgA_GTPase   89 gleelkellkd.ktsvlvGqSGvGKStLinal 119 
                    +++l+ ++++ + +++vG +G GKStL  +l
   EPX70773.1 1229 VISNLNLHIHHaEKVAIVGRTGSGKSTLGLTL 1260
                   5667777777768899***********96555 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0   0.00048      0.23      17      42 ..     636     661 ..     628     666 .. 0.82
   2 !   13.1   0.1   0.00013     0.059      16      38 ..    1234    1256 ..    1229    1258 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00048
      AAA_29  17 ieidlkgatlltGpsGsGKSTllDAi 42 
                 +++  ++  +++Gp+GsGK++l+ A+
  EPX70773.1 636 FKFPKNQLSIVVGPTGSGKTSLISAL 661
                 5666556889*************886 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 0.00013
      AAA_29   16 tieidlkgatlltGpsGsGKSTl 38  
                   ++i+ ++ + ++G++GsGKSTl
  EPX70773.1 1234 NLHIHHAEKVAIVGRTGSGKSTL 1256
                  5678878899************8 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0    0.0007      0.33       6      29 ..     642     665 ..     640     782 .. 0.88
   2 !    9.1   0.6    0.0031       1.5       8      31 ..    1243    1266 ..    1237    1401 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.0007
      AAA_22   6 gilvvtGesGtGKTtllrrlleql 29 
                 ++ +v+G++G+GKT l+  ll +l
  EPX70773.1 642 QLSIVVGPTGSGKTSLISALLGEL 665
                 5679*************9999877 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0031
      AAA_22    8 lvvtGesGtGKTtllrrlleqlde 31  
                  ++++G +G+GK+tl  +ll+  ++
  EPX70773.1 1243 VAIVGRTGSGKSTLGLTLLRFTNR 1266
                  78*************999998765 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   0.2   0.00012     0.058     131     154 ..     643     666 ..     633     671 .. 0.85
   2 ?   -0.0   0.0      0.79   3.7e+02      25      79 ..     819     875 ..     800     885 .. 0.74
   3 !    7.7   0.0    0.0034       1.6     121     156 ..    1232    1267 ..    1177    1308 .. 0.81
   4 ?   -2.4   0.0         4   1.9e+03     145     198 ..    1318    1374 ..    1317    1383 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00012
       T2SSE 131 lilvsGgTgsGKttllyallkein 154
                 l +v G+TgsGKt l+ all e+ 
  EPX70773.1 643 LSIVVGPTGSGKTSLISALLGELS 666
                 55899***************9985 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.79
       T2SSE  25 vkvrervdg..ielreveelekaalerlisriaalakldiseerplqdarlpekgvr 79 
                 + ++++        +e+ +++++a++  + +  a   ++++ e++ q+++l e++ r
  EPX70773.1 819 FPIKDKSSPilQLAEEIGHPSESATQSNMPNAEAQLDSSVDAEQIAQSGKLVEEEKR 875
                 556555555322456888999999999999999******************966555 PP

  == domain 3  score: 7.7 bits;  conditional E-value: 0.0034
       T2SSE  121 vlrkavrerglilvsGgTgsGKttllyallkeinks 156 
                   l+  +++   + + G TgsGK+tl  +ll + n  
  EPX70773.1 1232 NLNLHIHHAEKVAIVGRTGSGKSTLGLTLLRFTNRV 1267
                  566667777888899***********9999998876 PP

  == domain 4  score: -2.4 bits;  conditional E-value: 4
       T2SSE  145 llyallkeinksderivtvEDpvEiqleganqvqlnak...kakvtfadllraaLRl 198 
                  ll+ +l++  +++  i   ED   i+++ + qv+ + +   +++ ++ +l ra++R+
  EPX70773.1 1318 LLNEALQTSGANKMAIAYTEDQQPIHINLDTQVSSEGSnfsQGQKQVLALARAIVRR 1374
                  578888888888889999999999999999998888777777777777888888875 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.0   0.00011     0.053      27     161 ..     644     785 ..     633     796 .. 0.49
   2 ?    6.8   0.1     0.017       8.2      27     145 ..    1243    1384 ..    1233    1408 .. 0.45

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 0.00011
      AAA_16  27 vllsGesGvGKsslvrellralekd...........ggiflrgkcdql...esaipy.salaqalareellrqlldeaesaeleawrekleeala.avp 109
                  +++G+ G+GK+sl+ +ll +l+ +             ++ +  + ++   + +i + s++ ++  + ++l++ + +   ++le  ++  +++++  + 
  EPX70773.1 644 SIVVGPTGSGKTSLISALLGELSLTsgsyslprskgVSYVSQVAWLRNatiKDNILFnSVFDETRYK-DVLKACGLQ---SDLENLPAGDLTEIGeKGV 738
                 579****************988877555555555531222222222221112223331112222222.333333333...2333333333333331233 PP

      AAA_16 110 elagaeasrllellkrllallsrderplvlvlDdlq.wadeaslql.laaLlrl 161
                  l+g   +  + +l+r++ ++++     v+++Dd+   +d ++ ++ +++L++ 
  EPX70773.1 739 TLSGG--QKQRIALARAV-YAPS----SVILIDDVMsALDIHTSNWiFRHLFQG 785
                 33333..44444444555.3333....466666654244446666656666665 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.017
      AAA_16   27 vllsGesGvGKsslvrellralekdggiflrgkcdqlesaipysa.laqalareellrqllde......aesaeleawrekleeala.......... 106 
                  v ++G  G+GKs+l  +ll +++ +    + g  + +  +++     ++ l r + +  + ++      +  ++l+++ e  ++ l+          
  EPX70773.1 1243 VAIVGRTGSGKSTLGLTLL-RFTNR----VGGSLRIN--DLEIEDvNLSSL-R-QRISFIPQDpilfsgTVRSNLDPFNELEDSLLNealqtsgank 1330
                  889************9999.57766....33333333..111111123333.2.3344444443333332222222222222222222223333344 PP

      AAA_16  107 .................avpelagaea..srllellkrllallsrderplvlvlDdlq 145 
                                      +++++++  s+   ++ +l++ + r+++  +++lD+  
  EPX70773.1 1331 maiaytedqqpihinldT--QVSSEGSnfSQGQKQVLALARAIVRRSK--IIILDECT 1384
                  444444444444443221..2222222333333333333333333243..77777766 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.2    0.0011       0.5       3      26 ..     645     668 ..     644     676 .. 0.87
   2 !   10.8   0.1   0.00086      0.41       1      21 [.    1242    1262 ..    1242    1281 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.0011
                 EEEESTTSSHHHHHHHHHTSTEEE CS
    MMR_HSR1   3 aivGrpNvGKStLinaltgekaiv 26 
                 ++vG + +GK++Li+al+ge + +
  EPX70773.1 645 IVVGPTGSGKTSLISALLGELSLT 668
                 58*****************97655 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00086
                  EEEEEESTTSSHHHHHHHHHT CS
    MMR_HSR1    1 evaivGrpNvGKStLinaltg 21  
                  +vaivGr+ +GKStL  +l++
  EPX70773.1 1242 KVAIVGRTGSGKSTLGLTLLR 1262
                  69*************888776 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.0    0.0012      0.56      34      58 ..     642     666 ..     634     675 .. 0.84
   2 !    9.7   0.0    0.0012      0.54      22      55 ..    1229    1262 ..    1207    1273 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.0012
       AAA_7  34 kpvllvGptGtGKtviikdllkkld 58 
                 +  ++vGptG+GKt++i+ ll +l+
  EPX70773.1 642 QLSIVVGPTGSGKTSLISALLGELS 666
                 55689**************998886 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.0012
       AAA_7   22 ysyllelllknkkpvllvGptGtGKtviikdllk 55  
                  +   l+l++++  +v +vG tG+GK+++  +ll+
  EPX70773.1 1229 VISNLNLHIHHAEKVAIVGRTGSGKSTLGLTLLR 1262
                  5566899*******************98776665 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.0   0.00014     0.066       2      69 ..     645     768 ..     644     807 .. 0.58
   2 ?    4.2   0.2      0.11        53      27      96 ..    1342    1406 ..    1243    1426 .. 0.67

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 0.00014
                 EEESSTTSSHHHHHHHHHHHHTHE.....EEEEETTTCSSS....................................................STTHHH CS
         AAA   2 llyGppGtGKTllakavakelgve.....fleisgsellsk....................................................yvgese 43 
                 +++Gp G GKT+l++a+  el+ +     + + +g + +s+                                                    +   + 
  EPX70773.1 645 IVVGPTGSGKTSLISALLGELSLTsgsysLPRSKGVSYVSQvawlrnatikdnilfnsvfdetrykdvlkacglqsdlenlpagdlteigekgVTLSGG 743
                 689*****************9644222233333333333224444444444444444444444444555555555555556666655555554334444 PP

                 HHHHHHHHHHHHTSTS.EEEEEETGGG CS
         AAA  44 kkirelfkeakekakp.silfiDEida 69 
                 +k r  +++a   a p s+++iD++ +
  EPX70773.1 744 QKQRIALARAV-YA-PsSVILIDDVMS 768
                 44444444432.22.447777777655 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.11
                  EEEETTTCSSS...STTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHT CS
         AAA   27 leisgsellsk...yvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgv 96  
                  + i++ + +s+    +++++k++ +l +++ + +  +i+++DE  a + +        +++++++L +++ + 
  EPX70773.1 1342 IHINLDTQVSSegsNFSQGQKQVLALARAIVRRS--KIIILDECTASVDDT------TDQQIQKTLRSAFGDA 1406
                  3344444443344455566666666666655554..9******99998888......7788888887776655 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.0    0.0011       0.5      31      58 ..     639     666 ..     630     685 .. 0.82
   2 ?    6.1   0.0     0.016       7.4      29      54 ..    1236    1261 ..    1222    1270 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.0011
      AAA_25  31 pagelallaGapgtGKttlaldlalava 58 
                 p++ l++++G++g+GKt l + l  +++
  EPX70773.1 639 PKNQLSIVVGPTGSGKTSLISALLGELS 666
                 899****************999876655 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.016
      AAA_25   29 llpagelallaGapgtGKttlaldla 54  
                  ++   e ++++G++g+GK+tl l l 
  EPX70773.1 1236 HIHHAEKVAIVGRTGSGKSTLGLTLL 1261
                  566778899************99886 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0     0.016       7.6      43      60 ..     645     662 ..     618     669 .. 0.81
   2 !    9.8   0.0   0.00097      0.46      39      57 ..    1227    1258 ..    1188    1262 .. 0.62

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.016
                   EEE--TTSSHHHHHHHHH CS
  FtsK_SpoIIIE  43 lvaGatgsGKStalntLi 60 
                   +v+G tgsGK+  + +L+
    EPX70773.1 645 IVVGPTGSGKTSLISALL 662
                   8*************9998 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00097
                    -..............SEEEE--TTSSHHHHHH CS
  FtsK_SpoIIIE   39 a.............shllvaGatgsGKStaln 57  
                    +               + ++G+tgsGKSt   
    EPX70773.1 1227 PsvisnlnlhihhaEKVAIVGRTGSGKSTLGL 1258
                    244444444444457899**********9755 PP

>> DUF87  Helicase HerA, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.3      0.02       9.3      28      48 ..     646     666 ..     642     676 .. 0.89
   2 !   11.9   0.2   0.00037      0.17      24      45 ..    1241    1262 ..    1231    1275 .. 0.85

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.02
       DUF87  28 ilgsTGsGKSntvavLleell 48 
                 ++g TGsGK+ +++ Ll el 
  EPX70773.1 646 VVGPTGSGKTSLISALLGELS 666
                 89***************9997 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 0.00037
       DUF87   24 rHlAilgsTGsGKSntvavLle 45  
                  + +Ai+g+TGsGKS++   Ll+
  EPX70773.1 1241 EKVAIVGRTGSGKSTLGLTLLR 1262
                  579************9776665 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.084        40       6      22 ..     645     661 ..     640     714 .. 0.91
   2 !   10.8   0.0   0.00063       0.3       3      60 ..    1241    1369 ..    1239    1423 .. 0.63

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.084
      AAA_24   6 liyGpsgiGKTtlakel 22 
                 +++Gp g+GKT+l++ l
  EPX70773.1 645 IVVGPTGSGKTSLISAL 661
                 689**********9987 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00063
      AAA_24    3 lkiliyGpsgiGKTtlakelgpkplfidtekGlksldadkfpdie..swedfldevvel...................................... 59  
                   k++i+G  g+GK+tl ++l     f +  +G+ ++++ +++d++  s   +++ + ++                                      
  EPX70773.1 1241 EKVAIVGRTGSGKSTLGLTL---LRFTNRVGGSLRINDLEIEDVNlsS---LRQRISFIpqdpilfsgtvrsnldpfneledsllnealqtsgankm 1331
                  699*****************...9999**************9996553...4444443322244444444444444433355555555555555555 PP

      AAA_24   60 .....................................a 60  
                                                       +
  EPX70773.1 1332 aiaytedqqpihinldtqvssegsnfsqgqkqvlalaR 1369
                  55554444555555544444444444444444444444 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0     0.014       6.7      46      67 ..     640     661 ..     618     673 .. 0.83
   2 ?    6.2   0.0     0.017         8      43      67 ..    1236    1260 ..    1224    1277 .. 0.87
   3 ?   -0.8   0.1       2.3   1.1e+03     102     144 ..    1367    1409 ..    1356    1428 .. 0.65

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.014
   IstB_IS21  46 kkenivllGpsGvGKshlaial 67 
                 k++  +++Gp+G GK+ l  al
  EPX70773.1 640 KNQLSIVVGPTGSGKTSLISAL 661
                 5666799**********99987 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.017
   IstB_IS21   43 fiekkenivllGpsGvGKshlaial 67  
                  +i+++e ++++G +G GKs l  +l
  EPX70773.1 1236 HIHHAEKVAIVGRTGSGKSTLGLTL 1260
                  58899**************998776 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 2.3
   IstB_IS21  102 alkrll.kvdllilDdlgllpldqaeaellfeviekryerrsii 144 
                   +++++ +++++ilD++    +d+   +++ + + ++++ ++++
  EPX70773.1 1367 LARAIVrRSKIIILDECT-ASVDDTTDQQIQKTLRSAFGDATML 1409
                  444444156999999975.5677777777777777777666655 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0    0.0054       2.5       2      39 ..     645     694 ..     645     776 .. 0.76
   2 ?    5.9   0.0     0.037        17       1      26 [.    1243    1271 ..    1243    1385 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0054
      AAA_18   2 lltGtpGvGKttlakeLskrlgf............gvnlrdvakenglll 39 
                 ++ G+ G+GKt+l  +L  +l +            +  +++va+ ++  +
  EPX70773.1 645 IVVGPTGSGKTSLISALLGELSLtsgsyslprskgVSYVSQVAWLRNATI 694
                 699**************444433445556666666666666666666555 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.037
      AAA_18    1 IlltGtpGvGKttlakeLskrlgf...gv 26  
                  +++ G  G+GK+tl+  L + ++    + 
  EPX70773.1 1243 VAIVGRTGSGKSTLGLTLLRFTNRvggSL 1271
                  6899**********999955433355533 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.0    0.0022       1.1      23      43 ..     640     661 ..     630     712 .. 0.76
   2 ?    4.6   0.0     0.046        22      23      90 ..    1241    1347 ..    1230    1404 .. 0.66

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.0022
      AAA_15  23 ee.ltvliGkNnsGKSsileal 43 
                 ++ l++++G+ +sGK+s++ al
  EPX70773.1 640 KNqLSIVVGPTGSGKTSLISAL 661
                 334******************9 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.046
      AAA_15   23 eeltvliGkNnsGKSsilealdlFlnnk...ekkn....................................kkvikiekedleifeniseskdikId 80  
                  e    ++G+ +sGKS++   l  F n+                                            + +  +e++ l++  ++s  +++ I+
  EPX70773.1 1241 E-KVAIVGRTGSGKSTLGLTLLRFTNRVggsL--RindleiedvnlsslrqrisfipqdpilfsgtvrsnlDPFNELEDSLLNEALQTSGANKMAIA 1334
                  4.789************999999999654333..044777777778888888888888888888888888866667777777887788888888888 PP

      AAA_15   81 vefaek...ekak 90  
                  ++++++    + +
  EPX70773.1 1335 YTEDQQpihINLD 1347
                  7773334433333 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.1    0.0036       1.7       2      23 ..     644     665 ..     643     676 .. 0.88
   2 ?    3.8   0.0      0.12        58       3      20 ..    1244    1261 ..    1243    1297 .. 0.87

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0036
      AAA_33   2 vllvGlpGsGKstlaerllkkl 23 
                  ++vG+ GsGK+ l+  ll +l
  EPX70773.1 644 SIVVGPTGSGKTSLISALLGEL 665
                 589*************999887 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.12
      AAA_33    3 llvGlpGsGKstlaerll 20  
                   +vG  GsGKstl   ll
  EPX70773.1 1244 AIVGRTGSGKSTLGLTLL 1261
                  689*********977766 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00066      0.31      20     172 ..     641     805 ..     635     815 .. 0.68
   2 ?    0.7   0.1      0.88   4.2e+02      24     127 ..    1244    1383 ..    1235    1403 .. 0.54

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00066
    ATPase_2  20 neiyfiYGpegsGKtaLlkeiienl.edkdk.......yviyyialreesiskldefie......eeeekkklekal........giavpkaeleeilk 96 
                 n+   + Gp gsGKt+L+  ++ +l + ++         v y++++   +++++++ i       e++ k+ +   l        ++++p   l ei +
  EPX70773.1 641 NQLSIVVGPTGSGKTSLISALLGELsLTSGSyslprskGVSYVSQVAWLRNATIKDNILfnsvfdETRYKD-V---LkacglqsdLENLPAGDLTEIGE 735
                 5667899***************9994343336777777788888877777777777766665553333333.3...23346777766666666666655 PP

    ATPase_2  97 eksklvfkaielllekikkkgkkiiiiiDelqklidlglngaellvkeLlnliesltkekhlcvviclsSeglfie 172
                 +  +l   + +++  +    +   +i+iD++  + d+         +++++ + + +  ++ +v++++ S  lf++
  EPX70773.1 736 KGVTLSGGQKQRIALARAVYAPSSVILIDDVMSALDIHTS------NWIFRHLFQGPLMQNRTVILVTHSVNLFLD 805
                 5555544444444444444444589999999999988777......677777777777788888888888777766 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.88
    ATPase_2   24 fiYGpegsGKtaLlkeiienl.edkdkyviyyialreesiskldefie....................eeeekkklekal...............gi 84  
                   i G+ gsGK++L   ++    +  +  +i   +++++++s+l++ i                     +e e++ l++al               ++
  EPX70773.1 1244 AIVGRTGSGKSTLGLTLLRFTnRVGGSLRINDLEIEDVNLSSLRQRISfipqdpilfsgtvrsnldpfNELEDSLLNEALqtsgankmaiaytedQQ 1340
                  5788999999988655554441222334555555555555555555555555555555554444444444444444444455555555555555544 PP

    ATPase_2   85 avpkaeleeilk..eksklvfkaielllekikkkgkkiiiiiDel 127 
                  ++  +   ++++  ++  + +k++ +l ++i ++ k  iii+De 
  EPX70773.1 1341 PIHINLDTQVSSegSNFSQGQKQVLALARAIVRRSK--IIILDEC 1383
                  444433333433344444445555555555555555..6666665 PP

>> AAA_27  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   0.00017     0.082      12      47 ..     627     662 ..     626     687 .. 0.93

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00017
      AAA_27  12 GkftdrsldfsaeeadlhliyGpNEAGKstalrAis 47 
                 G f  r l+f+  +++l +++Gp  +GK+++++A+ 
  EPX70773.1 627 GDFRLRDLNFKFPKNQLSIVVGPTGSGKTSLISALL 662
                 7888899999999********************985 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.3   0.00096      0.45       2      27 ..     645     670 ..     645     676 .. 0.89
   2 ?    2.4   0.1      0.31   1.5e+02       1      14 [.    1243    1256 ..    1243    1264 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00096
                 EEEEBTTTTHHHHHHHHHTS--S--- CS
   Dynamin_N   2 avvGsqSsGKSSvlnaLlgedilprg 27 
                 +vvG + sGK+S++ aLlge  l +g
  EPX70773.1 645 IVVGPTGSGKTSLISALLGELSLTSG 670
                 59*****************9888776 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.31
                  EEEEEBTTTTHHHH CS
   Dynamin_N    1 iavvGsqSsGKSSv 14  
                  +a+vG + sGKS++
  EPX70773.1 1243 VAIVGRTGSGKSTL 1256
                  79***********8 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.1     0.049        23       3      20 ..     645     662 ..     644     677 .. 0.85
   2 ?    5.2   0.0     0.041        19       2      25 ..    1243    1266 ..    1242    1282 .. 0.90
   3 ?    0.2   0.1       1.5     7e+02      63      83 ..    1372    1392 ..    1318    1449 .. 0.72

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.049
                 EEE--SSSSHHHHHHHGG CS
       AAA_5   3 lLvGppGtgKselaerla 20 
                 ++vGp+G+gK++l+  l+
  EPX70773.1 645 IVVGPTGSGKTSLISALL 662
                 789**********98876 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.041
                  EEEE--SSSSHHHHHHHGGGGBS- CS
       AAA_5    2 vlLvGppGtgKselaerlaaalnr 25  
                  v +vG +G+gKs+l   l++++nr
  EPX70773.1 1243 VAIVGRTGSGKSTLGLTLLRFTNR 1266
                  668****************99976 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 1.5
                  --G-SEEEEESGGG--HHHHH CS
       AAA_5   63 aregeilvlDEveraesevln 83  
                  +r+++i++lDE +   +++++
  EPX70773.1 1372 VRRSKIIILDECTASVDDTTD 1392
                  348888888887644455444 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.0     0.003       1.4      18      38 ..     641     661 ..     638     674 .. 0.87
   2 ?    2.4   0.0      0.24   1.1e+02      20      35 ..    1242    1257 ..    1233    1273 .. 0.75

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.003
      AAA_30  18 drvavltGpAGtGKttalkal 38 
                 +++++++Gp G+GKt +++al
  EPX70773.1 641 NQLSIVVGPTGSGKTSLISAL 661
                 679**************9987 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.24
      AAA_30   20 vavltGpAGtGKttal 35  
                   ++++G+ G+GK+t+ 
  EPX70773.1 1242 KVAIVGRTGSGKSTLG 1257
                  4789**********85 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0     0.037        18      22      47 ..     639     664 ..     614     672 .. 0.80
   2 ?    5.1   0.1     0.043        20      12     154 ..    1230    1396 ..    1220    1409 .. 0.54

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.037
                 .TTSEEEEEESTTSTHHHHHHHHHHH CS
      ResIII  22 krdkrglikmaTGtGKTlvaaklier 47 
                  +++  +++ +TG+GKT ++ +l  +
  EPX70773.1 639 PKNQLSIVVGPTGSGKTSLISALLGE 664
                 5666778999*******998666555 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.043
                  HHHHT......TTSEEEEEESTTSTHHHHHHHH...HHHH-S...................-EEEEESSHHHHHHHH.HHGGGGTGG.......GEE CS
      ResIII   12 ienlleklkskrdkrglikmaTGtGKTlvaakl...ierllkkgkee..............kflflvprkslleqtl.eefkkflseayke...igk 87  
                  i nl  ++  ++ +++ i+  TG+GK+ + + l   + r+  + +++              ++ f+ +  +l + t  +++  f + + ++   +  
  EPX70773.1 1230 ISNLNLHI--HHAEKVAIVGRTGSGKSTLGLTLlrfTNRVGGSLRINdleiedvnlsslrqRISFIPQDPILFSGTVrSNLDPFNELE-DSllnEAL 1323
                  55555555..689999**********97665540004444444444477777777777777777777777777777742222222222.22322333 PP

                  EESSS-B--.........-SEEEEEHHHHHHTH............HHHTTT-S....EEEEETGGGTTS.TTTHHHH CS
      ResIII   88 kvsgdkkka..kekdstnkkilvttiqsldadseee....eeeseellrdrfd....viiiDEaHrlgakkswreil 154 
                   +sg +k+a  + +d++ ++i + t  s   ++ ++      +  ++          +ii DE+  + ++++ ++i 
  EPX70773.1 1324 QTSGANKMAiaYTEDQQPIHINLDTQVSSEGSNFSQgqkqVLALARAI----VrrskIIILDECTASVDDTTDQQIQ 1396
                  455555555444444444444444433333333222222122222233....1444488888877666665555554 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0      0.04        19      24      52 ..     645     673 ..     636     778 .. 0.85
   2 ?    5.4   0.1     0.018       8.7      23      37 ..    1243    1257 ..    1229    1272 .. 0.82
   3 ?   -2.4   0.0       4.7   2.2e+03      80     113 ..    1351    1384 ..    1333    1405 .. 0.78

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.04
                 EEEESTTSSHHHHHHHHCCSHCCCCCCBT CS
      NB-ARC  24 alvGmgGvGKttlakqilnksdevegrFd 52 
                  +vG  G+GKt l++  l +++ + g + 
  EPX70773.1 645 IVVGPTGSGKTSLISALLGELSLTSGSYS 673
                 589************99999888888875 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.018
                  EEEEESTTSSHHHHH CS
      NB-ARC   23 valvGmgGvGKttla 37  
                  va+vG+ G+GK+tl 
  EPX70773.1 1243 VAIVGRTGSGKSTLG 1257
                  89***********96 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 4.7
                  CTTSSSS-STTSHHHHHHHHCCCTTEEEEEEEE- CS
      NB-ARC   80 eddleekeeveslkrklvrlLltkrfllvlDDVw 113 
                  +++ ++++++++    l r++ ++  +++lD   
  EPX70773.1 1351 SSEGSNFSQGQKQVLALARAIVRRSKIIILDECT 1384
                  3567889999989999********9999*99765 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.0    0.0049       2.3      17      41 ..     642     666 ..     631     673 .. 0.83
   2 ?    2.6   0.0      0.15        71      19      50 ..    1243    1274 ..    1236    1278 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0049
  Zeta_toxin  17 klillgGqpGAGKselaellkdele 41 
                  l +++G +G+GK++l+++l  el 
  EPX70773.1 642 QLSIVVGPTGSGKTSLISALLGELS 666
                 67899**************999986 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.15
  Zeta_toxin   19 illgGqpGAGKselaellkdelerqgnvvrld 50  
                  + ++G +G+GKs+l   l + ++r g+ +r++
  EPX70773.1 1243 VAIVGRTGSGKSTLGLTLLRFTNRVGGSLRIN 1274
                  5689*********9888888877778777776 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.6    0.0018      0.85       3      21 ..     644     662 ..     642     671 .. 0.86
   2 ?    3.0   0.1      0.14        66       4      24 ..    1244    1266 ..    1242    1288 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.0018
                 EEEEESTTCCHHHHHHHHH CS
        cobW   3 tvltGflGsGKTtLlnhll 21 
                 ++++G+ GsGKT+L+++ll
  EPX70773.1 644 SIVVGPTGSGKTSLISALL 662
                 689*************998 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.14
                  EEEESTTCCHHHHHHHHH..CT- CS
        cobW    4 vltGflGsGKTtLlnhll..enr 24  
                   ++G  GsGK+tL  +ll  +nr
  EPX70773.1 1244 AIVGRTGSGKSTLGLTLLrfTNR 1266
                  699**********9999855444 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.0    0.0078       3.7      18      36 ..     640     658 ..     631     669 .. 0.84
   2 ?    2.0   0.0      0.25   1.2e+02      16      38 ..    1237    1259 ..    1228    1261 .. 0.81

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0078
                 H-SEEEEE--TTSSTTHHH CS
        PhoH  18 kndivfaiGpaGtGKtyla 36 
                 kn++ +++Gp+G+GKt l 
  EPX70773.1 640 KNQLSIVVGPTGSGKTSLI 658
                 899*************875 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.25
                  HHH-SEEEEE--TTSSTTHHHHH CS
        PhoH   16 lkkndivfaiGpaGtGKtylava 38  
                  +++ + v ++G++G+GK+ l ++
  EPX70773.1 1237 IHHAEKVAIVGRTGSGKSTLGLT 1259
                  446677999*********99775 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.1    0.0087       4.1       2      23 ..     643     664 ..     642     674 .. 0.86
   2 ?    3.7   0.2      0.11        52       3      16 ..    1243    1256 ..    1241    1262 .. 0.89

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0087
                 CEEEEC-TTTCHHHHHHHHHHH CS
       NACHT   2 lvilqGeaGsGKTtLlqklala 23 
                 l+i+ G+ GsGKT L+  l  +
  EPX70773.1 643 LSIVVGPTGSGKTSLISALLGE 664
                 689************9988755 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.11
                  EEEEC-TTTCHHHH CS
       NACHT    3 vilqGeaGsGKTtL 16  
                  v++ G+ GsGK+tL
  EPX70773.1 1243 VAIVGRTGSGKSTL 1256
                  89***********9 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.058        27      18      33 ..     645     660 ..     637     695 .. 0.86
   2 ?    3.0   0.0      0.16        77      11      30 ..    1237    1256 ..    1230    1267 .. 0.84
   3 ?   -0.1   0.0       1.4   6.8e+02     119     148 ..    1372    1401 ..    1322    1410 .. 0.86

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.058
                 EEEESTTSSHHHHHHH CS
                 xxxxxxxxxxxxxxxx RF
        DEAD  18 lvaaeTGsGKTlafli 33 
                 +v ++TGsGKT   + 
  EPX70773.1 645 IVVGPTGSGKTSLISA 660
                 7999*******98765 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.16
                  HHTTCEEEEEESTTSSHHHH CS
                  xxxxxxxxxxxxxxxxxxxx RF
        DEAD   11 ilgggdvlvaaeTGsGKTla 30  
                  i + ++v + ++TGsGK++ 
  EPX70773.1 1237 IHHAEKVAIVGRTGSGKSTL 1256
                  5567899**********975 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 1.4
                  CTTEEEEEEETHHHHHHTTTHHHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  119 lsqvrflVlDEadrlldqgfsdfinrilnq 148 
                  +++ ++++lDE+    d+   ++i++ l++
  EPX70773.1 1372 VRRSKIIILDECTASVDDTTDQQIQKTLRS 1401
                  567899******999999999999987765 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.1      0.17        80      57      77 ..     645     665 ..     637     669 .. 0.86
   2 ?    6.6   0.0    0.0082       3.9      51     112 ..    1238    1300 ..    1226    1304 .. 0.78

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.17
      DUF815  57 LLwGarGtGKSslvkallney 77 
                 +++G  G+GK sl+ all e+
  EPX70773.1 645 IVVGPTGSGKTSLISALLGEL 665
                 5789*************9886 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0082
      DUF815   51 lpannvLLwGarGtGKSslvkallneyaeeg..Lrlievekedlkelpklvellrerperfilf 112 
                  ++a++v ++G  G+GKS+l  +ll+ +++ g  Lr+ ++e ed+ +l++l + ++  p+  ilf
  EPX70773.1 1238 HHAEKVAIVGRTGSGKSTLGLTLLRFTNRVGgsLRINDLEIEDV-NLSSLRQRISFIPQDPILF 1300
                  67999**************9999998888888899977777765.4666666666666666666 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0     0.022        11       3      20 ..     645     662 ..     644     697 .. 0.88
   2 ?    3.6   0.3      0.16        76       1      19 [.    1242    1260 ..    1242    1270 .. 0.85

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.022
                 EEESSTTSSHHHHHHCHC CS
         Roc   3 vlvGdsgvGKtsllkrfv 20 
                 ++vG +g+GKtsl++ ++
  EPX70773.1 645 IVVGPTGSGKTSLISALL 662
                 68************9987 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.16
                  EEEEESSTTSSHHHHHHCH CS
         Roc    1 KvvlvGdsgvGKtsllkrf 19  
                  Kv +vG +g+GK++l   +
  EPX70773.1 1242 KVAIVGRTGSGKSTLGLTL 1260
                  89************96554 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.1     0.015       7.3       5      24 ..     645     664 ..     641     669 .. 0.88
   2 ?    3.0   0.1      0.16        77       2      18 ..    1241    1257 ..    1240    1263 .. 0.87

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.015
   PduV-EutP   5 lliGkvgsGKttLtqalkge 24 
                 +++G++gsGKt+L  al ge
  EPX70773.1 645 IVVGPTGSGKTSLISALLGE 664
                 79************999765 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.16
   PduV-EutP    2 kkilliGkvgsGKttLt 18  
                  +k+ ++G++gsGK tL 
  EPX70773.1 1241 EKVAIVGRTGSGKSTLG 1257
                  6899***********96 PP

>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.3     0.012       5.6       1      17 [.     646     662 ..     646     672 .. 0.87
   2 ?    2.8   0.0      0.18        85       1      24 [.    1245    1268 ..    1245    1276 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.012
  ATP_bind_1   1 vvGpaGsGKttfvgals 17 
                 vvGp GsGKt++++al 
  EPX70773.1 646 VVGPTGSGKTSLISALL 662
                 89***********9986 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.18
  ATP_bind_1    1 vvGpaGsGKttfvgalseilelrg 24  
                  +vG  GsGK+t+  +l  +++  g
  EPX70773.1 1245 IVGRTGSGKSTLGLTLLRFTNRVG 1268
                  79*********9888887777665 PP

>> Pox_A32  Poxvirus A32 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.3      0.49   2.3e+02      39     103 ..     333     401 ..     322     431 .. 0.72
   2 ?    2.5   0.1      0.18        85      17      37 ..     645     665 ..     632     668 .. 0.84
   3 ?    5.0   0.0      0.03        14      15      35 ..    1242    1262 ..    1233    1266 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.49
     Pox_A32  39 kkykhifLltp...vknseYdkyvwPdhinkvtseeeleYsLsatkekieklakkeknqk.eaerfLli 103
                 + y +ifLl+    +++ ++++y++    ++v s   l Y++ +   + + + +k++++k    + L+ 
  EPX70773.1 333 SPYVWIFLLLVgpfINSMAFQSYLFLSTRYTVRSYSVLVYQIYKKVLDFRFVQNKNEESKvGRVNNLIS 401
                 5677888877556677789*********************99877766665555555555233334444 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.18
     Pox_A32  17 alvGgsGsGktvyLlsLlrtl 37 
                 ++vG +GsGkt  + +Ll +l
  EPX70773.1 645 IVVGPTGSGKTSLISALLGEL 665
                 579*********999998765 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.03
     Pox_A32   15 rlalvGgsGsGktvyLlsLlr 35  
                  ++a+vG +GsGk +  l Llr
  EPX70773.1 1242 KVAIVGRTGSGKSTLGLTLLR 1262
                  79************9999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1463 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       756  (0.0421663); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        99  (0.00552178); expected 17.9 (0.001)
Passed Fwd filter:                        39  (0.00217525); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              38  [number of targets reported over threshold]
# CPU time: 1.07u 0.34s 00:00:01.41 Elapsed: 00:00:00.51
# Mc/sec: 8704.28
//
Query:       EPX70774.1  [L=226]
Description: translin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.2e-35  121.6   2.3    4.9e-35  121.4   2.3    1.0  1  Translin     Translin family
  ------ inclusion threshold ------
      0.045   13.0   2.4      0.046   12.9   0.8    1.7  2  DUF2046      Uncharacterized conserved protein H4 (DUF2046)
       0.11   12.5   5.5        4.8    7.3   0.1    3.0  3  MCC-bdg_PDZ  PDZ domain of MCC-2 bdg protein for Usher syndro
       0.15   12.5   2.1       0.46   11.0   0.7    2.0  2  TBCC_N       Tubulin-specific chaperone C N-terminal domain


Domain annotation for each model (and alignments):
>> Translin  Translin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.4   2.3   1.1e-38   4.9e-35       3     204 ..      20     221 ..      18     222 .. 0.87

  Alignments for each domain:
  == domain 1  score: 121.4 bits;  conditional E-value: 1.1e-38
                 HHHHHHHHHHHHHHHHHHHHHHHTTGSSTTTHHHHHHH.H...HHHHHHHHHHTTSS..........GHHHHGGGTH.HHHHHHHHHHHHHHHH..... CS
    Translin   3 reriikasrditaaskkiifllhrvrsekteaqdkkakik...keakeklkeiakllasvaeelqgsnayrYqrqisgglqeliealsfahYle..... 93 
                 r+++   ++ i+++sk +  ll +++ ++   ++++ +i+   + +k k++e+ak++       +++++y+Y + + +++qe+  + ++a + +     
  EPX70774.1  20 RDELSSRVETIDQESKVLRLLLGEFEISN---NETSIDITksiEVIKVKIQELAKVA-------SEHSYYKYVNVWDRAIQEVACLTLLAAWRGalqgh 108
                 999*********************99555...3333333311134444444444444.......6678*************************999999 PP

                 ...HSS---HHHHHHHTT.---S...SSSSS---HHHHHHHHHHHHHHHHHHHHHHHCTT--S.HHHHHHHHHHHHHHHHHTS----HH...HHHHHTT CS
    Translin  94 ...tqtLitleevqkilealken...eedafhltpedYllGlfdLtgELmRfainsvalgdkeekplqilkflrelragfellnlkndsakdlrkKldv 186
                    + +L+tle+v++il+a  +    ee +fh+++e+Yl+G+++++ EL R+++n+v  g+ke  pl+ l+ +++++++f+ll+lknds   lr+ +d+
  EPX70774.1 109 edkKYQLLTLEQVGQILNATLVPvypEEVKFHISIEEYLHGVLSISTELARLSVNAVIYGNKE-VPLKSLQTIENVHSSFQLLSLKNDS---LRRHFDG 203
                 999999************87766999***********************************98.**********************998...******* PP

                 HHHHHHHHHHHHHHHHHH CS
    Translin 187 lkqsvkKvEdvvYdlsvR 204
                 lk+++k+ EdvvYd++++
  EPX70774.1 204 LKYQLKRAEDVVYDMRIH 221
                 ***************996 PP

>> DUF2046  Uncharacterized conserved protein H4 (DUF2046)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.8     1e-05     0.046      16      74 ..      13      72 ..       2      83 .. 0.78
   2 ?   -1.4   0.0      0.24   1.1e+03      20      53 ..     177     210 ..     159     219 .. 0.66

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1e-05
     DUF2046 16 lepssvkreelqkrveslqqenrvlkieldtyklrvk.alqeenrelrkasvniqakaeq 74
                +++ +  r+el++rve+++qe +vl++ l ++ +  + +  +  +++  ++v+iq  a  
  EPX70774.1 13 IDHETSLRDELSSRVETIDQESKVLRLLLGEFEISNNeTSIDITKSIEVIKVKIQELAKV 72
                445566789***********************9987614556678899999999977654 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.24
     DUF2046  20 svkreelqkrveslqqenrvlkieldtyklrvka 53 
                   + e++++  + l+ +n  l+  +d  k+++k 
  EPX70774.1 177 LQTIENVHSSFQLLSLKNDSLRRHFDGLKYQLKR 210
                 4445666666666777777777777777777664 PP

>> MCC-bdg_PDZ  PDZ domain of MCC-2 bdg protein for Usher syndrome
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.5    0.0021       9.2       2      38 ..       9      45 ..       8      49 .. 0.94
   2 ?   -1.3   0.0       0.5   2.2e+03       4      23 ..      57      76 ..      55      77 .. 0.81
   3 ?    7.3   0.1    0.0011       4.8       5      38 ..     179     212 ..     177     215 .. 0.95

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0021
  MCC-bdg_PDZ  2 LksrIeeLkaqnelLsltleerkqqseeLsldlgkaE 38
                 L+++I++ ++  + Ls   e   q+s  L l+lg  E
   EPX70774.1  9 LQAKIDHETSLRDELSSRVETIDQESKVLRLLLGEFE 45
                 99*******************************9766 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.5
  MCC-bdg_PDZ  4 srIeeLkaqnelLsltleer 23
                 ++Ie  k + + L++++ e+
   EPX70774.1 57 KSIEVIKVKIQELAKVASEH 76
                 68999999999999988776 PP

  == domain 3  score: 7.3 bits;  conditional E-value: 0.0011
  MCC-bdg_PDZ   5 rIeeLkaqnelLsltleerkqqseeLsldlgkaE 38 
                   Ie + + ++lLsl  +  + + ++L  +l++aE
   EPX70774.1 179 TIENVHSSFQLLSLKNDSLRRHFDGLKYQLKRAE 212
                  79*******************************9 PP

>> TBCC_N  Tubulin-specific chaperone C N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.7    0.0001      0.46      23      85 ..      15      79 ..       6      80 .. 0.86
   2 ?    0.2   0.0      0.22   9.8e+02      43      78 ..     178     214 ..     175     220 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.0001
      TBCC_N 23 seaveeekvdsFlkaFteekaaieellesve..esadksklkqkldeitaeiqeLqkllaessmf 85
                +e++ +++ +s  +++++e++ ++ ll ++e  +++ + + +++++ i+ +iqeL k+++e s++
  EPX70774.1 15 HETSLRDELSSRVETIDQESKVLRLLLGEFEisNNETSIDITKSIEVIKVKIQELAKVASEHSYY 79
                4555566677778999***************998889999**********************997 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.22
      TBCC_N  43 aaieellesve.esadksklkqkldeitaeiqeLqkl 78 
                 + ie+  +s++  s+++++l++++d ++ ++++ +++
  EPX70774.1 178 QTIENVHSSFQlLSLKNDSLRRHFDGLKYQLKRAEDV 214
                 5677777777777899999999999998888776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       775  (0.0432261); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1610.44
//
Query:       EPX70775.1  [L=283]
Description: elongator complex associated protein Kti2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-95  320.1   0.0    1.3e-95  320.0   0.0    1.0  1  KTI12       Chromatin associated protein KTI12
     0.0011   19.6   0.0     0.0017   18.9   0.0    1.5  1  AAA_18      AAA domain
     0.0018   18.4   0.0     0.0036   17.5   0.0    1.6  1  AAA_33      AAA domain
  ------ inclusion threshold ------
      0.055   13.7   0.0      0.085   13.1   0.0    1.4  1  AAA_28      AAA domain
      0.087   12.7   0.0       0.12   12.2   0.0    1.4  1  APS_kinase  Adenylylsulphate kinase
       0.11   12.7   0.0       0.22   11.8   0.0    1.5  1  AAA_22      AAA domain


Domain annotation for each model (and alignments):
>> KTI12  Chromatin associated protein KTI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  320.0   0.0   4.3e-99   1.3e-95       1     272 []       1     276 [.       1     276 [. 0.98

  Alignments for each domain:
  == domain 1  score: 320.0 bits;  conditional E-value: 4.3e-99
                 E.EEEEE--TTSSHHHHHHHHHHHHHH.........TT--EEEE-THHHH.TTSSS--GGGHHHHHHHHHHHHHHHHTT.SEEEE-S---SHHHHHHHH CS
       KTI12   1 MpLvvltGlPssGKstrakeLakalee.........ekrsvvviddeslgiekdsykdsakekalRsslrsavkrdLskekvVIvDslnyikgfRYeLy 90 
                 MpL++++G+P+sGK+trak+L+kalee         ++++vv+i+deslgi+k+ y++s++eka+R+ l+s+v+r+Lsk+++V +D+lnyikgfRY+L+
  EPX70775.1   1 MPLIIFSGYPCSGKTTRAKQLQKALEEriennvdgtKDYRVVLINDESLGIKKEVYRESKTEKAARGLLYSSVQRELSKSTIVLCDALNYIKGFRYQLF 99 
                 *************************************************************************************************** PP

                 HHHHHTT-EEEEEEEE--HHHHHHHHHHTT-S..S-HHHHHHHHHH---TTSS-GGGS-SEEEE.TTS---HHHHHHHHHHHHTS--SSSTT------- CS
       KTI12  91 ciakaakttlcvvyvvapldvlvkwneereekeeyekelldaLiqRyeePdsknrWDsPlftvlsaeeklpldeilkaliekkklkpnqatlskplaea 189
                 c++k++ t++cvv+v++p+d   ++n   e++  y++++ld Li RyeeP+ ++rWDsPlftv +++ + p+d i+++li++k  kpn at++k+ ae 
  EPX70775.1 100 CESKSMYTPHCVVHVAVPKDLPKQLNATSENP--YPEDVLDGLIFRYEEPNGMTRWDSPLFTVIHDDPTPPIDAIWSVLIHNKSVKPNLATMTKAPAEV 196
                 ******************************99..***************************************************************** PP

                 HHHHHHHHHHHHHHHHHHH....HTT--HHH................HHHHHHHHHHHHHHHT.TSSS--HHHHHHHHHHHHH CS
       KTI12 190 nflqeLdketseivkeileaqksavaidkltlpgsseslelpakkltlaeLsrlrrqFvklnkaklenvdeekiaklFvdyLn 272
                 n+l+eLdk+t++++  il++q+ ++ ++ l +pgs++++e+p  +++l+ L+r rrqFv++n+  +++++++ ++++FvdyLn
  EPX70775.1 197 NYLYELDKVTQDVIMLILNHQN-TEGSSSLPIPGSRLHIEMPGITVSLPLLQRFRRQFVHINR--QQSYNTNLLKDMFVDYLN 276
                 *******************665.556678899*******************************..99***************9 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   5.8e-07    0.0017       1      26 [.       4      36 ..       4     117 .. 0.73

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 5.8e-07
      AAA_18  1 IlltGtpGvGKttlakeLskrl.gf......gv 26
                I+ +G+p++GKtt ak L+k l +       g+
  EPX70775.1  4 IIFSGYPCSGKTTRAKQLQKALeERiennvdGT 36
                899***************999833344444422 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   1.2e-06    0.0036       1     141 [.       3     145 ..       3     147 .. 0.53

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 1.2e-06
      AAA_33   1 lvllvGlpGsGKstlaerllkklg............avllssdt..........lrrrlfgtdqqsktdytrvldrlyqilnelarkalsagrnvilda 77 
                 l+++ G p+sGK+t a++l k+l             +                 +++ ++   ++sk      ++ +++ l   +++ ls+   v+ da
  EPX70775.1   3 LIIFSGYPCSGKTTRAKQLQKALEeriennvdgtkdY------RvvlindeslgIKKEVY---RESK-----TEKAARGLLYSSVQRELSKSTIVLCDA 87 
                 79****************9888775443333333331......03322222333333333...2222.....223455555555566666666666666 PP

      AAA_33  78 tnlsrrerarflklarrlgvpvrivvvetdeetlkeRlakRaangddrsevpeealdrqkarfe 141
                  n  +  r +++   + +  p+ +v+v ++ ++ k+ +a  +++      +pe +ld  + r+e
  EPX70775.1  88 LNYIKGFRYQLFCESKSMYTPHCVVHVAVPKDLPKQLNATSENP------YPEDVLDGLIFRYE 145
                 66666555555555555555666666666666666655555554......55555555555555 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   2.9e-05     0.085       2      21 ..       4      27 ..       3     113 .. 0.67

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 2.9e-05
      AAA_28  2 ivitGgestGKTtlleaLa....a 21
                i+++G +++GKTt +++L+    +
  EPX70775.1  4 IIFSGYPCSGKTTRAKQLQkaleE 27
                89*************999944432 PP

>> APS_kinase  Adenylylsulphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   4.1e-05      0.12       5      31 ..       4      30 ..       2     125 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 4.1e-05
                EEEESSTTSSHHHHHHHHHHHHHHTT- CS
  APS_kinase  5 vwltGlsgsGKstianalekkLvekgi 31
                + ++G+ +sGK+t a++l+k+L+e+  
  EPX70775.1  4 IIFSGYPCSGKTTRAKQLQKALEERIE 30
                789*******************98653 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   7.3e-05      0.22       8      59 ..       4      58 ..       2      85 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 7.3e-05
      AAA_22  8 lvvtGesGtGKTtllrrlleqldeeakaee...erpevvfvtlpsstsskdllre 59
                ++  G + +GKTt +++l++ l+e+++ +    ++ +vv+++  s++  k+++re
  EPX70775.1  4 IIFSGYPCSGKTTRAKQLQKALEERIENNVdgtKDYRVVLINDESLGIKKEVYRE 58
                67788999**************988776669999999999999999977777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (283 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       540  (0.0301188); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 1926.72
//
Query:       EPX70776.1  [L=1812]
Description: Sec7 domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-73  246.3   0.4    4.5e-73  244.8   0.4    1.8  1  Sec7      Sec7 domain
    5.8e-42  143.3   4.0    5.8e-42  143.3   4.0    4.2  5  Sec7_N    Guanine nucleotide exchange factor in Golgi transpo
    1.1e-33  114.9  12.4    7.1e-30  102.7   0.3    6.6  6  DUF1981   Domain of unknown function (DUF1981)
    4.6e-10   39.4   2.2    6.1e-09   35.8   0.1    2.9  2  DCB       Dimerisation and cyclophilin-binding domain of Mon2


Domain annotation for each model (and alignments):
>> Sec7  Sec7 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  244.8   0.4     1e-76   4.5e-73       1     183 []     707     890 ..     707     890 .. 0.98

  Alignments for each domain:
  == domain 1  score: 244.8 bits;  conditional E-value: 1e-76
                 HHHHHHHHHHHHHH-HHHHHHHHHHCCCC.TSSHHHHHHHHHHTCCS-HHHHHHHHCSGGHHHHHHHHHHHCTS--TT--HHHHHHHHCCCS-B-SSHH CS
        Sec7   1 rkklleeaaekFnkkpkkgikyliekgll.eedpksiakflketpgldkkklGeylgkekefnkevlkefvdlfdfsglrldeAlRlflssfrlpgEaq 98 
                 rkkll+++++kFn kp+ g+k l e+g++  +d++s+a+fl++t+gl+k++lG+ylg  +++n++v+++fvd+f+f++ r+++AlR +l+ frlpgEaq
  EPX70776.1 707 RKKLLRHCINKFNYKPSLGVKLLSENGFVnLDDSSSVATFLFNTEGLNKTTLGDYLGAGEDYNISVMHNFVDCFSFANYRFVDALRRLLQAFRLPGEAQ 805
                 699**************************4466999*************************************************************** PP

                 HHHHHHHHHHHHHHHTTCTCG-SHHHHHHHHHHHHHHHHHHC-TTSCCS--HHHHHHCTTTTBTTB---HHHHHHHHHHHHHS-- CS
        Sec7  99 kierilekFaekyfeqnpevfenadavfvLaysiimLntdlhnpqvkkkmtledFiknnrgindgkdlpeefLeeiYdsIkeeei 183
                 ki+ri+ kF+e+y+++np++f+nad++++LaysiimLntdlh+pq+k++mt+edFiknnrgin+g dl+e++L  +Y++I ++ei
  EPX70776.1 806 KIDRIMLKFSERYMKENPSTFANADTAYILAYSIIMLNTDLHSPQIKNRMTKEDFIKNNRGINNGGDLDEDYLGFVYEDILTNEI 890
                 ***********************************************************************************98 PP

>> Sec7_N  Guanine nucleotide exchange factor in Golgi transport N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.3   4.0   1.3e-45   5.8e-42       2     156 ..     385     554 ..     384     556 .. 0.94
   2 ?    3.2   0.8     0.016        73       9     137 ..    1164    1288 ..    1159    1292 .. 0.72
   3 ?   -1.1   0.3      0.34   1.5e+03      36     136 ..    1364    1482 ..    1318    1487 .. 0.60
   4 ?   -3.0   0.2       1.3   5.9e+03      54      74 ..    1597    1617 ..    1587    1703 .. 0.55
   5 ?   -3.8   0.0       2.4   1.1e+04      27      46 ..    1789    1808 ..    1765    1810 .. 0.69

  Alignments for each domain:
  == domain 1  score: 143.3 bits;  conditional E-value: 1.3e-45
      Sec7_N   2 akDaflvfrdLcklinsaks..k.pkflslaersktfsLeLlesvlsnhgdvfr............khpellqllkqklcplLlknlsespsfpvfers 85 
                 ++Da+lvfr+Lc+l+  ++s  k  ++ s+a+rsk++sL+L++svl++++d+f+            +  +l q+ +q++c +L++n+  sp ++vfe++
  EPX70776.1 385 LQDAYLVFRTLCRLAVRHSSsdKvDNIRSQAMRSKLISLHLIYSVLDKNSDLFTeltfppqtmpalEGLTLAQASRQYICLVLSRNA-VSPIPQVFEIC 482
                 68************753443543555559**********************************************************.*********** PP

      Sec7_N  86 lrivllLlkkfrseLktEievflsllililles.dsslwqrvlaLeilrrlcsdpqllvelylnYDcdeeak 156
                 ++i++l+++++r ++k+Ei vf++++++++l+  ++s++q+   L i++r+c++p++lvely nYDcd++++
  EPX70776.1 483 CNIFWLIVSSLRIQFKQEIAVFFHEVYFPILDLkNTSYNQKLHTLLIFQRICRNPRALVELYINYDCDRNST 554
                 ********************************99999*******************************9986 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.016
      Sec7_N    9 frdLcklinsakskpkflslaersktfsLe.LlesvlsnhgdvfrkhpellqllkqklcplLlknlsespsfpvferslrivllLlkkfrseLktEi 104 
                  f++Lc ++   + + + ++ +e  ++fsL+ L+e  + n g++  + +++ ++l  k ++l+ +      +++v + +l  + +L  +f++  +  +
  EPX70776.1 1164 FEALCEVA--WD-EITSSNESESPRLFSLQkLVEISYYNMGRIRVEWSSIWNVLG-KFFNLVATR----GNKHVAVFALDSLRQLSMHFLQIEELSL 1252
                  77888883..44.333336677788888854777777777777666766666665.445554444....4778888889999999999999999999 PP

      Sec7_N  105 evflsllililles....dsslwqrvlaLeilrrlcs 137 
                    f ++++++  e     d+++  ++l+L+++r++++
  EPX70776.1 1253 FSFQKEFLKPY-EYvmssDAPVDVKELVLQCIRQMIQ 1288
                  99999999987.4444459999***********9876 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 0.34
      Sec7_N   36 sLeLlesvlsnhg.dvfrkhpellqllkqklcplLlknls...espsfpvferslrivllLlkkfrseLktE.ievflsllilill........... 116 
                  sL++++ ++ n   +   k+++  + + +  +p L+ +     + ++ +v +r+l+ ++ ++++ ++ ++++  e++ + +i++++           
  EPX70776.1 1364 SLDIIKKIYYNMIlEAKDKNNSNPEDVSKSTFPILFAYYDvvvSAEDLEVRSRALHYMFYIFHEDSDDFNQQtWEIVSRKFIFPIFstfslesddvl 1460
                  4555555554444333334444444455555555555544444555667778888888888888888887774477777777777644444433333 PP

      Sec7_N  117 ..esdsslwqrvlaLeilrrlc 136 
                    +++   wq  +++e+l++++
  EPX70776.1 1461 lrDEEVRTWQSTTLVEALKNIV 1482
                  3333444488888888887775 PP

  == domain 4  score: -3.0 bits;  conditional E-value: 1.3
      Sec7_N   54 hpellqllkqklcplLlknls 74  
                  ++e+ +++++ +++lLl ++ 
  EPX70776.1 1597 QTEFRSMIRKCILQLLLVSIV 1617
                  555555555555555544432 PP

  == domain 5  score: -3.8 bits;  conditional E-value: 2.4
      Sec7_N   27 slaersktfsLeLlesvlsn 46  
                    + r+k f+L++ + ++++
  EPX70776.1 1789 YSTARTKNFALHIQKELMKS 1808
                  56789999999998877765 PP

>> DUF1981  Domain of unknown function (DUF1981)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0     0.097   4.3e+02      23      77 ..     947     999 ..     941    1003 .. 0.72
   2 !    8.7   0.1   0.00035       1.6      34      67 ..    1045    1078 ..    1023    1087 .. 0.83
   3 ?    3.6   0.0     0.013        59      21      65 ..    1172    1216 ..    1167    1238 .. 0.85
   4 !  102.7   0.3   1.6e-33   7.1e-30       2      82 ..    1244    1324 ..    1243    1325 .. 0.98
   5 ?   -2.4   0.0         1   4.6e+03      38      63 ..    1519    1545 ..    1482    1554 .. 0.75
   6 ?   -0.2   0.2       0.2   8.8e+02      28      46 ..    1595    1613 ..    1590    1619 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.097
     DUF1981  23 eimsnnssaeirelvlecveqliqsraeniksGWktifgvltaaakeeneslvrl 77 
                  +m++++++  +e v    +++ +  + +++ GW +i+  ++   +e +e+l +l
  EPX70776.1 947 KLMKQQKHNPKKENVFYNAKHFEH-IGPMLEAGWMPILAAISNPLQE-SEHLYEL 999
                 566777777777777777777644.477899*********9999876.4556655 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00035
     DUF1981   34 relvlecveqliqsraeniksGWktifgvltaaa 67  
                    +v++ + ++  ++++n++  Wk i++ +++  
  EPX70776.1 1045 NTMVIKTLLKIACAEGNNLRFSWKDILTSISQLE 1078
                  579*************************998865 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.013
     DUF1981   21 FeeimsnnssaeirelvlecveqliqsraeniksGWktifgvlta 65  
                  + ei s+n+s+  r + l+ + ++   ++  i+  W  i++vl++
  EPX70776.1 1172 WDEITSSNESESPRLFSLQKLVEISYYNMGRIRVEWSSIWNVLGK 1216
                  67899999999999999*************************975 PP

  == domain 4  score: 102.7 bits;  conditional E-value: 1.6e-33
     DUF1981    2 flekeelsnfkfQkefLkPFeeimsnnssaeirelvlecveqliqsraeniksGWktifgvltaaakeeneslvrlafqil 82  
                  fl++eels f+fQkefLkP+e++ms+   ++++elvl+c++q+iq+r+++iksGWkt+fgv+t++ak +n++l +l+f++l
  EPX70776.1 1244 FLQIEELSLFSFQKEFLKPYEYVMSSDAPVDVKELVLQCIRQMIQARVSSIKSGWKTLFGVFTFSAKARNDTLLSLTFETL 1324
                  9*****************************************************************************985 PP

  == domain 5  score: -2.4 bits;  conditional E-value: 1
     DUF1981   38 lecveqliqsraeni.ksGWktifgvl 63  
                   +c++q++  +a+   +  W  + +++
  EPX70776.1 1519 TSCMQQVLLENASRFtEEDWDSVVELF 1545
                  579999999888887666777776665 PP

  == domain 6  score: -0.2 bits;  conditional E-value: 0.2
     DUF1981   28 nssaeirelvlecveqliq 46  
                  ++++e r ++ +c+ ql+ 
  EPX70776.1 1595 EKQTEFRSMIRKCILQLLL 1613
                  67899***********986 PP

>> DCB  Dimerisation and cyclophilin-binding domain of Mon2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.8   0.1   1.4e-12   6.1e-09      67     174 ..     189     315 ..     165     318 .. 0.84
   2 ?    2.1   0.3      0.03   1.3e+02      47     113 ..    1246    1314 ..    1218    1378 .. 0.65

  Alignments for each domain:
  == domain 1  score: 35.8 bits;  conditional E-value: 1.4e-12
         DCB  67 acetknpkivqiaLgslqrLisheviseea............iskiietlwkllelgve...ielkvLqtllllv..ttss.vvhgdtlakalvlCfrL 147
                 a e  +  + +iaL+++ +L s  + +e++            ++ i+++ +++++ +v    ++l+v+++l  ++  + ++  +hg  l++ ++  +++
  EPX70776.1 189 AFEIEQDDVLNIALNTVSKLASFAYFPENKkisasnpssksmLQCIVDMVCDCINDEVVdgtLQLNVVKALSAFIlcSEKNaLLHGAILLNSIRKLYNI 287
                 55666677899****************7777777888888889***********99654599*******99876622444469**************** PP

         DCB 148 .hfskdnvvqntAaAtlrQlvsvvFeRv 174
                   +  d  +q+ A+A+l+Q v +vFeR+
  EPX70776.1 288 fLLGDDDSIQSVAQASLTQAVGIVFERL 315
                 5566677********************8 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.03
         DCB   47 eeeeqslaeaseeilkPlllacetknp.kivqiaLgslqrLisheviseea.iskiietlwkllelgve 113 
                  + ee sl ++ +e+lkP     ++  p  + ++ L++++++i+ +v s ++  +++   ++  ++++ +
  EPX70776.1 1246 QIEELSLFSFQKEFLKPYEYVMSSDAPvDVKELVLQCIRQMIQARVSSIKSgWKTLFGVFTFSAKARND 1314
                  3346788888999999998888887762566799********999887544344444444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1812 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       770  (0.0429472); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.97u 0.33s 00:00:01.30 Elapsed: 00:00:00.49
# Mc/sec: 11207.37
//
Query:       EPX70777.1  [L=445]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.9e-20   70.9   0.1    1.2e-19   70.1   0.1    1.4  1  La        La domain
  ------ inclusion threshold ------
       0.44   10.4  10.7       0.97    9.3  10.7    1.6  1  PRR20     Proline-rich protein family 20


Domain annotation for each model (and alignments):
>> La  La domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.1   0.1   1.4e-23   1.2e-19       3      58 ..     306     359 ..     304     360 .. 0.96

  Alignments for each domain:
  == domain 1  score: 70.1 bits;  conditional E-value: 1.4e-23
                 HHHHHHHHTT-TTT-HHHHHHHTTSTTS---HHHHHTSSHHHHHHSSHHHHHHHHH CS
          La   3 kQvEfYFSdeNLpkDkFLrkkmdkdpegwVplsliasfkrmkkltkdveliaealr 58 
                  Q+++Y S eNL+kD FLrk+md+  eg+Vp++++asf+r+k+lt+d++l++ea++
  EPX70777.1 306 SQIDYYMSIENLCKDMFLRKHMDD--EGYVPVAFLASFNRIKSLTSDINLLLEACE 359
                 7**********************9..9***************************96 PP

>> PRR20  Proline-rich protein family 20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3  10.7   0.00011      0.97       3     140 ..      94     228 ..      92     271 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00011
       PRR20   3 eprrskrlralaPnqasgGdprepgcsvvdredsveadGPveP.aqPakpiayvkPlrrepParaepaePaerGrrpggsrrahtgrgrgaGagsrrda 100
                 e++++k+ r  +P      ++ e  +s   ++d+ e   P  P +q + +   ++P   +pP+++ + +P+    r+ g rr+++ r  ++ a++  + 
  EPX70777.1  94 EQKQTKQARLQDPTIWPSPKLVEQKFSEEKKQDPEEKK-PLAPkTQGKGKWVVITPEISHPPIHSSSKKPSR--SRNDGNRRSGSARR-KSNAQNFSHN 188
                 899****************************9987765.66662688888999*****************85..57777888844443.3333334444 PP

       PRR20 101 geregleellgpdlhiqlddqgePghqgeveirqtpafsf 140
                 ++++  +e + +d+   ld+ + Pg   ++  +  ++ s 
  EPX70777.1 189 QNQNRRQENVPRDVTQPLDEMNGPGAAQKTSEQSNATNSH 228
                 445566778889************9874444333333343 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (445 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1265  (0.0705561); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.33s 00:00:01.00 Elapsed: 00:00:00.50
# Mc/sec: 2680.31
//
Query:       EPX70778.1  [L=200]
Description: transporter Sft2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.4e-25   88.3  17.9      6e-25   87.9  17.9    1.2  1  Got1      Got1/Sft2-like family
  ------ inclusion threshold ------
        1.3    7.2  12.2        1.7    6.8  12.2    1.1  1  DUF2070   Predicted membrane protein (DUF2070)
        2.4    8.2   7.0        4.2    7.5   6.7    1.5  1  DUF3671   Protein of unknown function


Domain annotation for each model (and alignments):
>> Got1  Got1/Sft2-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.9  17.9     1e-28     6e-25       2     110 ..      78     186 ..      77     189 .. 0.96

  Alignments for each domain:
  == domain 1  score: 87.9 bits;  conditional E-value: 1e-28
        Got1   2 vllfllsllglpllflkprkFallytlGnilflastafLiGpkkqlkkmfskerliativyllsllltLyaalvlkstlltllfvivqllallwyllsy 100
                 +++++++++ +p+l+lkprkF+ll+t+G++l+++++a++iG+k+++++++ +erl+ t+ y++sll+t+++++++kst+l ++f ++ ++ +l yl+ +
  EPX70778.1  78 FACYAIACFMFPVLILKPRKFVLLLTMGSLLAVLGFAIIIGFKTHFEQLITRERLPITFGYFASLLATVLSTIYIKSTILSIVFGAIHIILFLAYLIAF 176
                 68999998889**************************************************************************************** PP

        Got1 101 iPggrsalkk 110
                 +P+g++++++
  EPX70778.1 177 FPFGTRTVSF 186
                 *****99986 PP

>> DUF2070  Predicted membrane protein (DUF2070)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8  12.2   0.00029       1.7      37     148 ..      60     176 ..      46     194 .. 0.51

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.00029
     DUF2070  37 k...lfgillfglpalvaflltlpvlrilggrltykrslflalltelivviisllaillsall...qalvllalvlslalvfalrllvlvavsdesllk 129
                 +   +++++lfgl +l +f+ +  +  ++   +   r+++l l++  ++++ + +ai++ + +   q ++   l +++   ++l   vl ++  +s++ 
  EPX70778.1  60 SlsrWERYMLFGLCLLGSFACYAIACFMFPVLILKPRKFVLLLTMGSLLAV-LGFAIIIGFKThfeQLITRERLPITFGYFASLLATVLSTIYIKSTIL 157
                 034477777777777777777777777776664444443333333333333.34444444333334444444444444444444444555555555555 PP

     DUF2070 130 avlpaliqpllailllvly 148
                 +++  +i+ +l++++l+++
  EPX70778.1 158 SIVFGAIHIILFLAYLIAF 176
                 5544444444444444444 PP

>> DUF3671  Protein of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   6.7   0.00071       4.2      42     110 ..      96     175 ..      87     179 .. 0.73

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.00071
     DUF3671  42 kkyglllilpvllpliglivpilfeaksk...............kslkkkelevlatsieklytiffiilvviillvliYiliK 110
                 +k+ lll + +ll ++g+ ++i f+++ +               +sl ++      ++i++ +ti++i++  i++++++  li 
  EPX70778.1  96 RKFVLLLTMGSLLAVLGFAIIIGFKTHFEqlitrerlpitfgyfASLLATV----LSTIYIKSTILSIVFGAIHIILFLAYLIA 175
                 89***************9999998877768999999988876544444444....44466677777777777776666655554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1006  (0.0561102); expected 358.6 (0.02)
Passed bias filter:                      426  (0.0237604); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.29s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 1361.75
//
Query:       EPX70779.1  [L=2382]
Description: alpha-1,3-glucan synthase Mok11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.4e-26   91.5   0.3    4.8e-21   75.7   0.2    3.0  2  Alpha-amylase    Alpha amylase, catalytic domain
    2.1e-13   50.5   0.0    3.8e-13   49.7   0.0    1.4  1  Glyco_transf_5   Starch synthase catalytic domain
    5.3e-06   26.1   0.0    1.3e-05   24.9   0.0    1.6  1  Glycos_transf_1  Glycosyl transferases group 1
  ------ inclusion threshold ------
       0.15   12.8   0.1       0.34   11.6   0.1    1.6  1  Big_5            Bacterial Ig-like domain
        2.4    8.3   5.9         12    6.1   0.3    3.6  3  Insulin_TMD      Insulin receptor trans-membrane segment


Domain annotation for each model (and alignments):
>> Alpha-amylase  Alpha amylase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.7   0.2   1.3e-24   4.8e-21       1     218 [.     107     352 ..     107     364 .. 0.80
   2 !   11.9   0.0   3.4e-05      0.12     284     331 ..     457     500 ..     422     505 .. 0.68

  Alignments for each domain:
  == domain 1  score: 75.7 bits;  conditional E-value: 1.3e-24
                    --CHHHHCTCCCCCCCT-SCEEE..-B-CE-S-TTTTSS-SCECCE-CCC--CCCCCCHHHHHHCTT-EEEEEE--SC--TTSCC........... CS
  Alpha-amylase   1 GDLkGiiekLdYlkeLGvtaiwl..sPifkspqadhgYdiadytkidpefGtnedlkeLiskahekgikvilDlVvNHtsdehew........... 83 
                    GD+ G+ + LdYl+++Gv++++l  +P+++ p     Y   d+t +dp+ Gt ed+   i+++h++++++++Dl v   sd +             
     EPX70779.1 107 GDIIGVKKTLDYLQGMGVKGVYLagTPFVNLPWGADQYSPLDFTLLDPHLGTIEDWRSTIEEIHKRNMYILVDLTVATLSDLVGFqnyvntttpfs 202
                    9**********************666******************************************************9998544444444444 PP

                    ..CHCCHHSTTSGGGCCC-E.....................................ESS-STTC-TTTTCSCEECTTTTCEEESSS-TTS-BB-T CS
  Alpha-amylase  84 ..fkeslkkkgepkrdyyiwkegk...............................eekeppnnwkslfdgsaweydekaqeyylhlflkklpdLnt 146
                                     + wk  +                                +   +++  ++ d +a+  +  + e  l +f++ ++ L  
     EPX70779.1 203 lmE------------HNALWKGEHryrdwnfqnewdfdctlpefwgedgfpvvleWKGCYDSDFDQYGDTEAFGSHPDW-ERQLSKFASVQDRLRE 285
                    443............3344433334445555555668899999998888887776334444444446666666665555.33699*********** PP

                    TTCCCCCCCCCCCCCCCTTT.-SEEEETTCCCTTTCCCCHCCHCCHHHHHHHHHHHTC..CGTT-EEEEE-TT-S CS
  Alpha-amylase 147 eneevrkelkdvvkfwlekg.idGfRlDvvkhvskvealesngeflheftqalnetva..srkevmtvgEvssda 218
                     +++v ++lk+++ +++    +dGfR+D + ++          +fl +++  +   ++  +++++++ gEv +++
     EPX70779.1 286 WKPSVSEKLKRLSCLVISMLdVDGFRVDKATQMTV--------DFLADWADSIRDCARnhNKQNFFIPGEVTGSS 352
                    ***********7766666555**********9999........9999999999988888788999999**99865 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 3.4e-05
                    S--TTS--HHHHTTSSTTTTHHHHHHHHHCCCTSSSEEEEETTCCCT- CS
  Alpha-amylase 284 lgnHDqeRilsrlgddsaeaekklklaaillltlrGvpviYyGeEigm 331
                    + n D  R  s++        + +   +i  ++++G+p iYyG+E+g+
     EPX70779.1 457 VSNYDVFRWSSVVDGPG----RLILGTMISFFLFPGIPLIYYGDEQGL 500
                    44555555555555555....2333445667899************96 PP

>> Glyco_transf_5  Starch synthase catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.7   0.0   1.1e-16   3.8e-13       2     214 ..    1155    1360 ..    1154    1365 .. 0.77

  Alignments for each domain:
  == domain 1  score: 49.7 bits;  conditional E-value: 1.1e-16
  Glyco_transf_5    2 ilfvasEv..apl....aktGGLadvvgaLpkaLaklghdvrvilPry.gaikeekkeleevaelskaaedeveve.v...ekvkvaklkkdg 83  
                      il ++ E+  +      +k GGL+ +++ + + L+++  d   ++P   + i  +            +a+d+++v      + ++v++  +++
      EPX70779.1 1155 ILLATLEYdiP-TlnirIKIGGLGVMAQLMVRNLEHQ--DLLWVIPCVgDVIYPDM-----------EADDPITVViIgqsYLINVYRYVHKN 1233
                      56666666431.124469****************986..899******55555544...........223333444313468899******** PP

  Glyco_transf_5   84 vdvyfldnpeffdreg..lYgdkgedyednaerfalfsraalelleklgwkpdvihahDWhtalvpallkelykerglfkkiktvftiHNlay 174 
                      +++++ld+p f ++++  +Y ++  d    a  ++++++ +++++e+     d+ h++D+h al+p++l            +++++++HN ++
      EPX70779.1 1234 ITYLLLDAPVFRRQTTsePY-PARVDDLSSAIFYSAWNQCIANIMEN--KSIDLYHINDYHGALAPVYLLPKV--------VPVALSLHNAEF 1315
                      **********77544478**.44788888999999999999999999..369*****************9987........9*********** PP

  Glyco_transf_5  175 qgrfp.......kdelaalglpaedfekldglefygkvnflkagivy 214 
                      qg +p       +++ + +++p + +   + ++f + +n+l+ag  y
      EPX70779.1 1316 QGLWPlrspeevEEVCSVFNIPLDVC--SKYVQFGNVFNLLHAGASY 1360
                      *****999666333336688886655..4667778888888888765 PP

>> Glycos_transf_1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.0   3.5e-09   1.3e-05      10     127 ..    1438    1556 ..    1430    1578 .. 0.86

  Alignments for each domain:
  == domain 1  score: 24.9 bits;  conditional E-value: 3.5e-09
                       TTTTT-EEEEEESS-TTTTTHHHHHHHHHCCCCCHCSCEEEEEES.......STTHHHHHHHHHHHCTTCGGGEEECCHSSSHHHHHHCESE CS
  Glycos_transf_1   10 gknekkkiilsvgrlekeKgvdllikafallkkqlnpnvklviaG......ngeeekelkklaeelelsdnviflgevsredleellknadi 95  
                       +++ +  ++++vgr + +Kg+dl+ + ++ + +  n n+++v++G      ++   +++++l++++       f   v  +    +++ ad 
       EPX70779.1 1438 EIDPNADLLIFVGRWSIQKGIDLIADIAPVILE--NFNAQIVVIGpvidlyGKFAAEKFEALMQKYPR---RLFSRPVFTHLPQYIFSGADF 1524
                       67778899***********************96..7***********998766677778888888766...455555555666667777*** PP

                       EEEEESSBSS-HHHHHHHHTT--EEEETTTTH CS
  Glycos_transf_1   96 fvlpsisEgfGivllEAmaaglpviasnaggp 127 
                       +++ps+ E+fG+v++E    g+  i  n+gg+
       EPX70779.1 1525 ALIPSRDEPFGLVAVEFGRKGTLGIGANVGGL 1556
                       **********************9999999997 PP

>> Big_5  Bacterial Ig-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   9.5e-05      0.34       4      57 ..     728     781 ..     726     809 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 9.5e-05
       Big_5   4 aPtvvstsPadgatgvav..naeitvtFseavdastvtaatvialsdsettavtgs 57 
                 +P ++ +sP++ +  v++  + ++ ++Fse++  +++t+++ ++  + ++++v g 
  EPX70779.1 728 RPMITKISPKHDSRIVNTqgKVNVIIEFSEEMSCKSITENVHVQ--SKTQNNVVGE 781
                 6999********9988663255999************9998884..4444444444 PP

>> Insulin_TMD  Insulin receptor trans-membrane segment
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.3    0.0032        12       8      42 ..    1064    1098 ..    1062    1099 .. 0.90
   2 ?   -0.7   0.1      0.43   1.5e+03      16      23 ..    1476    1483 ..    1469    1485 .. 0.80
   3 ?    2.5   0.1     0.044   1.6e+02      23      41 ..    2358    2376 ..    2348    2378 .. 0.91

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0032
  Insulin_TMD    8 yldpsnivkIvigPviciillllvigavfvvvkKr 42  
                   y+ ps+ + + +g  ic+ill lv g v v++ Kr
   EPX70779.1 1064 YTHPSGSIYVSMGIYICFILLPLVSGLVSVLLFKR 1098
                   5779999999****************999998776 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.43
  Insulin_TMD   16 kIvigPvi 23  
                    +vigPvi
   EPX70779.1 1476 IVVIGPVI 1483
                   589****9 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.044
  Insulin_TMD   23 iciillllvigavfvvvkK 41  
                   ic+i  l+++++ +++++ 
   EPX70779.1 2358 ICLICQLGIVVGYYLFFRR 2376
                   9****************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2382 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       616  (0.0343577); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.16u 0.33s 00:00:01.49 Elapsed: 00:00:00.51
# Mc/sec: 14157.76
//
Query:       EPX70780.1  [L=582]
Description: alpha-amylase Aah2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.4e-53  181.9   2.4    2.4e-53  181.9   2.4    2.0  2  Alpha-amylase  Alpha amylase, catalytic domain
    5.8e-05   23.3   0.0    0.00013   22.1   0.0    1.5  1  DUF1966        Domain of unknown function (DUF1966)
     0.0027   16.8   0.1     0.0052   15.9   0.1    1.4  1  GHL10          Glycosyl hydrolase-like 10
  ------ inclusion threshold ------
      0.064   13.4   0.4         12    6.0   0.0    2.9  3  GHL6           Hypothetical glycosyl hydrolase 6


Domain annotation for each model (and alignments):
>> Alpha-amylase  Alpha amylase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  181.9   2.4   5.3e-57   2.4e-53       1     337 []      66     369 ..      66     369 .. 0.85
   2 ?   -0.6   0.1      0.17   7.5e+02      13      40 ..     512     536 ..     510     539 .. 0.87

  Alignments for each domain:
  == domain 1  score: 181.9 bits;  conditional E-value: 5.3e-57
                    --CHHHHCTCCCCCCCT-SCEEE-B-CE.......-S-TTTTSS-SCECCE-CCC--CCCCCCHHHHHHCTT-EEEEEE--SC--TTSCCCHCCHH CS
  Alpha-amylase   1 GDLkGiiekLdYlkeLGvtaiwlsPifk.......spqadhgYdiadytkidpefGtnedlkeLiskahekgikvilDlVvNHtsdehewfkeslk 89 
                    G+++Gi ++LdY++++G++aiw+sPif+          ++hgY++++ ++++ ++Gt+ed+k+L++++h +++ ++lD+ +N  + +    +  ++
     EPX70780.1  66 GTWNGIRDHLDYIQDMGFDAIWISPIFEneegnkiDGWSYHGYWTKNLYALNHHYGTKEDFKNLVEELHRRDMWILLDVAINSIALNGPLENITFD 161
                    89**************************99999998889*******************************************99999887655555 PP

                    STTSGGGCCC-E......ESS-STTC-TTTTCSCEECTTTTCEEESSS-TTS-BB-TTTCCCCCCCCCCCCCCCTTT.-SEEEETTCCCTTTCCCC CS
  Alpha-amylase  90 kkgepkrdyyiwkegkeekeppnnwkslfdgsaweydekaqeyylhlflkklpdLnteneevrkelkdvvkfwlekg.idGfRlDvvkhvskveal 184
                    k  + +          e++ +p +w      ++ ++ e  q+ +l  +   l+dL+ten++v++ l++ ++ ++e+  idG+R D+ kh +     
     EPX70780.1 162 KVVPFND---------ESYYHPFCWVD----YELNDVEVVQNCWLGDENLVLADLDTENPTVVEILQKWLRDVVEEYdIDGIRFDATKHAPV---- 240
                    3332222.........34567999985....33444444444455557899*****************7777666656**************.... PP

                    HCCHCCHHHHHHHHHHHTCCGTT-EEEEE-TT-SCCCHCCCC-CGG-SICECCITTCGGGCC-CTSTTSB-SS-HHHHHHHHHHHHHHS-CCCTTC CS
  Alpha-amylase 185 esngeflheftqalnetvasrkevmtvgEvssdasedlrvyttearlelemvldfphldvaqkakikeqlksisakklkellkkwlkaleeaaeea 280
                        ef+ + ++a+         v+t+gE++ ++  ++  y+ +a l++   l+fp +   + a+   + +  + ++l+++++++ +++ + ++  
     EPX70780.1 241 ----EFWSKMAEAAG--------VFTIGEYFTGSPTEACDYQ-NAGLDS--FLNFPLYWPITWAF---NNTGLQCEALATVINQIHSQCRD-VNAL 317
                    ....99999998888........89*******9996544444.444444..59****99999999...6777789***************9.999* PP

                    EEES--TTS--HHHHTTSSTTTTHHHHHHHHHCCCTSSSEEEEETTCCCT----STT CS
  Alpha-amylase 281 vtflgnHDqeRilsrlgddsaeaekklklaaillltlrGvpviYyGeEigmtggkdp 337
                     tf+gnHD +Ri+ +  d++     ++ +a  ++++++G+p+iYyG+E+ +  ++dp
     EPX70780.1 318 GTFIGNHDVPRIAHNNTDQA-----RVMNAISFVMMWDGIPIIYYGTEQNFNTFHDP 369
                    *************9999999.....7999********************99888775 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.17
                    CCCCT-SCEEE-B-CE-S-TTTTSS-SC CS
  Alpha-amylase  13 lkeLGvtaiwlsPifkspqadhgYdiad 40 
                    + ++ +t  ++ P ++ p   +gYd++d
     EPX70780.1 512 IPSITITTHYVQPTYDVP---FGYDMRD 536
                    567789999*********...*****99 PP

>> DUF1966  Domain of unknown function (DUF1966)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0     3e-08   0.00013      11      83 ..     424     493 ..     414     496 .. 0.87

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 3e-08
     DUF1966  11 lrKgpegsqvvtvlsnkGs.sgssytlslkssgyaagtevvdvlsCksvtvdssgeltvtmekGePrvlvpksk 83 
                 ++K     +v++vl n G  s++  t+s   +g ++g+   d++s k++ vd++g+l+v++  G P +++pk +
  EPX70780.1 424 IQKH----KVISVLGNWGIhSQEGLTISFIPVGAHPGDVYFDIISDKTYKVDEQGKLNVEIFFGFPVIMYPKTQ 493
                 4444....5*********9445557888888***************************************9976 PP

>> GHL10  Glycosyl hydrolase-like 10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.1   1.2e-06    0.0052     131     170 ..     203     242 ..     109     258 .. 0.67

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 1.2e-06
       GHL10 131 lnPliPevqdfitklvvevvkrYdvDgvqlDDyfylpesf 170
                 l+   P v + + k + +vv+ Yd+Dg+++D     p +f
  EPX70780.1 203 LDTENPTVVEILQKWLRDVVEEYDIDGIRFDATKHAPVEF 242
                 5677899************************877666666 PP

>> GHL6  Hypothetical glycosyl hydrolase 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0    0.0027        12      25      64 ..     103     142 ..      96     150 .. 0.74
   2 ?    3.9   0.0     0.012        55     115     136 ..     212     233 ..     205     234 .. 0.82
   3 ?   -1.2   0.0      0.47   2.1e+03       8      46 ..     336     373 ..     330     376 .. 0.67

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0027
        GHL6  25 ggvvyYrtkldfvtehpklk.rdllkelvkachregikvvv 64 
                 +++  Y tk  +  +h++ + +d+ k+lv+++hr+++ ++ 
  EPX70780.1 103 WSYHGYWTKNLYALNHHYGTkEDF-KNLVEELHRRDMWILL 142
                 555569999657777777772566.**********987765 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.012
        GHL6 115 eklaeeleealkrldlDGifld 136
                 e l + l+++++++d+DGi +d
  EPX70780.1 212 EILQKWLRDVVEEYDIDGIRFD 233
                 5677889************876 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 0.47
        GHL6   8 elkeagadtlvifardagg..vvyYrtkldfvtehpklkrd 46 
                 +++ ++a ++v+     +g  ++yY t+ +f t h + +r+
  EPX70780.1 336 QARVMNAISFVM---MWDGipIIYYGTEQNFNTFHDPFNRE 373
                 555556666665...34444789999999888888877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (582 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       468  (0.026103); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.24s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 4187.99
//
Query:       EPX70781.1  [L=1610]
Description: guanyl-nucleotide exchange factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-35  121.0   1.6    2.1e-34  118.7   0.9    2.7  2  DCB       Dimerisation and cyclophilin-binding domain of Mon2
      3e-31  108.4   4.0      3e-31  108.4   4.0    6.2  5  Sec7_N    Guanine nucleotide exchange factor in Golgi transpo
    5.7e-11   41.3  11.2    1.5e-09   36.7   3.6    3.6  3  Mon2_C    C-terminal region of Mon2 protein
    5.4e-06   26.2   0.3     0.0023   17.7   0.2    3.7  2  DUF1981   Domain of unknown function (DUF1981)


Domain annotation for each model (and alignments):
>> DCB  Dimerisation and cyclophilin-binding domain of Mon2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.7   0.9   4.8e-38   2.1e-34       5     177 ..       2     175 ..       1     176 [. 0.97
   2 ?   -3.3   0.0       1.4   6.1e+03      71      96 ..     920     944 ..     918     968 .. 0.64

  Alignments for each domain:
  == domain 1  score: 118.7 bits;  conditional E-value: 4.8e-38
         DCB   5 kllealqsdlkalsseskrkhskvkeasekgilkLktikssseee.eqslaeaseeilkPlllacetknpkivqiaLgslqrLisheviseeaiskiie 102
                 +l+e+l++ l++ls +s++k++++k+ +e++i  L++i++ s+++  q+l+++   +++P++ + + k  + +  aL+s+q Li  ++++++ ++++  
  EPX70781.1   2 NLYENLITFLNSLSLDSRKKNADLKKDAESSIKLLEQIRQDSDSKlAQALKQE-ALFFRPFVCSLDRKIDRCIVPALNSIQLLIINNALPSSVLPELFR 99 
                 5899**************************************88878999888.9******************************************** PP

         DCB 103 tlwkllelgveielkvLqtllllvttss.vvhgdtlakalvlCfrLhfskdnvvqntAaAtlrQlvsvvFeRvvae 177
                  l +  +lg++++l++Lq+++++ t ++ +++  +l  al +Cf+Lh +++++v+n A+AtlrQ+v +vF+ + +e
  EPX70781.1 100 VLDDTSSLGQDVQLRILQIIPIVCTNYAeYMRIPLLVPALHTCFSLHNNRNPIVANAASATLRQVVILVFDHLDHE 175
                 ***********************************************************************98766 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.4
         DCB  71 knpkivqiaLgslqrLisheviseea 96 
                 k +k v +a ++lq Li ++ + +  
  EPX70781.1 920 KGAKTVRLAFSCLQ-LICTDFLGSLD 944
                 67899999999998.55555554433 PP

>> Sec7_N  Guanine nucleotide exchange factor in Golgi transport N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.4   4.0   6.8e-35     3e-31       3     156 ..     187     336 ..     185     338 .. 0.95
   2 ?   -0.8   0.5      0.27   1.2e+03      28      49 ..     502     523 ..     424     566 .. 0.54
   3 ?   -0.5   1.6      0.22   9.9e+02       2      37 ..     821     854 ..     820    1032 .. 0.63
   4 ?    0.3   0.5      0.13   5.9e+02       6      64 ..    1069    1127 ..    1064    1171 .. 0.78
   5 ?   -0.6   0.1      0.25   1.1e+03      44      74 ..    1506    1537 ..    1496    1577 .. 0.77

  Alignments for each domain:
  == domain 1  score: 108.4 bits;  conditional E-value: 6.8e-35
      Sec7_N   3 kDaflvfrdLcklinsakskpkflslaersktfsLeLlesvlsnhgdvfrkhpellqllkqklcplLlknlsespsfpvferslrivllLlkkfrseLk 101
                  D + vf++Lc li s++    +l+++ +s tf+LeL+es+l nh+++f +++e+++ ++++l+p ++ +l++ ++f+v +r++ri+++L++++ ++L 
  EPX70781.1 187 SDLLTVFSNLCALIRSGS--SDLLKVNGISDTFGLELIESILVNHHHLF-ERSEFQDSVRKDLLPIMTASLASMSNFSVALRVARILSILFQHHTASLS 282
                 6999**********9666..7788*************************.99*******************9999************************ PP

      Sec7_N 102 tEievflsllilillesdsslwqrvlaLeilrrlcsdpqllvelylnYDcdeeak 156
                  ++ev+l+++i  l e++   w+++l+Le+lr l+++++l+  +y+ +D  e +k
  EPX70781.1 283 LDVEVILTFIISSL-ENSEAPWKKALFLEVLRCLFNNSELIFIMYSLFDGVEGRK 336
                 **************.999999****************************877766 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.27
      Sec7_N  28 laersktfsLeLlesvlsnhgd 49 
                  + +s  +s+eLl+  ++++ +
  EPX70781.1 502 STFMSSALSMELLKFSVDSYVK 523
                 3445555555555555555555 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.22
      Sec7_N   2 akDaflvfrdLcklinsaks......kpkflslaersktfsL 37 
                 ak+  +++  Lc+ i+++k+      +++fl         s 
  EPX70781.1 821 AKCLANILVELCSCISNEKNaenktfQEQFL--------QSV 854
                 5677777777777776333233322212221........222 PP

  == domain 4  score: 0.3 bits;  conditional E-value: 0.13
      Sec7_N    6 flvfrdLcklinsaksk...pkflslaersktfsLeLlesvlsnhgdvfrkhpellqllkqk 64  
                  ++++++ +kl++s+  +   +   + ae +  + +  + +v+s ++d++ k + +l+++k+ 
  EPX70781.1 1069 LKILSSQTKLAESTL-NgdtHD--EDAEQTSALIISGIANVFSANMDMLLKVEGILNVVKET 1127
                  577888888866443.321233..6777788888888**********************985 PP

  == domain 5  score: -0.6 bits;  conditional E-value: 0.25
      Sec7_N   44 lsnhgdvfrk.hpellqllkqklcplLlknls 74  
                  l++ ++ f + ++e+l +l++++c +L ++++
  EPX70781.1 1506 LQECQSSFDQvREEVLLMLQSRICWSLKRYMA 1537
                  45556778765788899999999999988875 PP

>> Mon2_C  C-terminal region of Mon2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.3     0.043   1.9e+02     535     630 ..     782     876 ..     771     889 .. 0.85
   2 !   36.7   3.6   3.2e-13   1.5e-09       1     235 [.     937    1159 ..     937    1165 .. 0.79
   3 !    6.4   0.0   0.00045         2     466     517 ..    1295    1344 ..    1280    1360 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.043
      Mon2_C 535 kvar.aksqkfdslwdeladtledflftksvctiedlsleeivldesidvevvellrdevlpyaneipkefvgqivvllnkgsihsasdsfieaeid 630
                 ++ r ++++k + +w+ ++ +l ++l  ++v  + +l ++  +    i ve+   +++e     + + ++f+  +  l     i  +++ ++e++i 
  EPX70781.1 782 NINRlSNAKKVSEVWPLISSSLSNILKNTTV--PPELRIRAAKCLANILVELCSCISNEKNAENKTFQEQFLQSVNLLQSSVEISDTTSKNVEYDIS 876
                 5667567889999*************99999..66788999999999************************98888887788888888999998874 PP

  == domain 2  score: 36.7 bits;  conditional E-value: 3.2e-13
      Mon2_C    1 tdfltvmpwrclqlvvdvaakfglqtqelnisltaigllwnisdyffq...kee.klqskqleekavlpefpatvklpqfdklwlclyaklgelcvd 93  
                  tdfl  + +      +d+   f  q+++ n+slta+gl+w +sd +     k +     + lee  +         lp  + lw+ l  +l +lc +
  EPX70781.1  937 TDFLGSLDMDNYLDLLDTLLVFCRQEKDANVSLTAVGLFWIVSDTLKSmfsKSDcSCTYTSLEELYLFTTTKRRDILP--EVLWIMLLVHLADLCEN 1031
                  78888888887777899999************************7655443444155677888877766655545555..68*************** PP

      Mon2_C   94 lrpavrksagqtlfstisahgsllnpstwqalvwkvlfnlldrvrelsssadkekveasgnilihhsrdtaekqwaetqvltlagvarvfntkrell 190 
                     +vr  a q lf   ++  s l  ++w +    v++++l    +l+ s+ +               dt + +  +t  l ++g+a vf ++ ++l
  EPX70781.1 1032 SWASVRDGAAQILFRIFNSQCSNLGINAWASCCQLVILKILSSQTKLAESTLN--------------GDTHDEDAEQTSALIISGIANVFSANMDML 1114
                  *********************************99999999655444433322..............355555556688899999999999888777 PP

      Mon2_C  191 qmlgdferawdlllefiqsaalsknnevslaalkslqeilyivst 235 
                    +  +    +  ++f+q+      + + ++ +k+++e+ ++ s 
  EPX70781.1 1115 LKVEGILNVVKETFKFMQNFHNGNYKRICMSNFKAMRELAFHSSQ 1159
                  777666667777788999988888888999999999988888775 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.00045
      Mon2_C  466 yvpfaekslevvvdlyqktatee.svvqeqilhdivkalrvplalkykclses 517 
                  y+ f++k le v    q ta ++ s+++  +l  ++ +l vp+ lky+c+  s
  EPX70781.1 1295 YICFSKKILERV---KQITADKNlSMLRSGVLSHFFDSLLVPMKLKYRCPKPS 1344
                  888888877755...5666655438999*********************9866 PP

>> DUF1981  Domain of unknown function (DUF1981)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0      0.01        45      28      66 ..     603     642 ..     598     650 .. 0.79
   2 !   17.7   0.2   5.2e-07    0.0023       6      83 ..     839     933 ..     835     934 .. 0.86

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.01
     DUF1981  28 nssaeirelv.lecveqliqsraeniksGWktifgvltaa 66 
                 ++s  +rel+ l++++ + ++ +e +  GWk++++ + +a
  EPX70781.1 603 QKSFSLRELIfLRSLSLVARQVGELLGKGWKILLETVDKA 642
                 56667888874677777777778888********998765 PP

  == domain 2  score: 17.7 bits;  conditional E-value: 5.2e-07
     DUF1981   6 eelsnfkfQkefLkPFeeim.........snnssaeirelvlecveqliqsraeniksGWktifgvltaaa........keeneslvrlafqilk 83 
                 +  +n +fQ++fL+  + +          s+n + +i  + le +  ++++ ++n+ +GW  +f +l+++         +++  + vrlaf++l+
  EPX70781.1 839 KNAENKTFQEQFLQSVNLLQssveisdttSKNVEYDISSIGLEALALILETVGHNLFQGWIYVFDMLRFSCakcsdlfgQDKGAKTVRLAFSCLQ 933
                 5678999*****999887665556656556667777********************************9988999999999999********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1610 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       722  (0.04027); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.97u 0.31s 00:00:01.28 Elapsed: 00:00:00.50
# Mc/sec: 9745.01
//
Query:       EPX70782.1  [L=79]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.8e-06   25.7   0.0    1.1e-05   25.4   0.0    1.2  1  Inhibitor_I78   Peptidase inhibitor I78 family
  ------ inclusion threshold ------
      0.013   16.1   0.0       0.02   15.6   0.0    1.3  1  potato_inhibit  Potato inhibitor I family


Domain annotation for each model (and alignments):
>> Inhibitor_I78  Peptidase inhibitor I78 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.0   1.2e-09   1.1e-05      30      62 ..      44      76 ..      31      79 .] 0.90

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 1.2e-09
  Inhibitor_I78 30 svRvlkPGqvvtleynpaRlniivegaGkisal 62
                   s Rvl PG   t++y   R+n  ++ +G i+ +
     EPX70782.1 44 SYRVLPPGTFSTMDYHDERVNFHTDADGTITYV 76
                   78***************************9865 PP

>> potato_inhibit  Potato inhibitor I family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.6   0.0   2.2e-06      0.02      30      60 ..      46      76 ..      38      78 .. 0.87

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 2.2e-06
  potato_inhibit 30 evvpegspvtadfrcnRVrvfvdengiVaqv 60
                    +v+p+g++ t+d+  +RV   +d++g+++ v
      EPX70782.1 46 RVLPPGTFSTMDYHDERVNFHTDADGTITYV 76
                    58**********************9999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       300  (0.0167327); expected 358.6 (0.02)
Passed bias filter:                      256  (0.0142785); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.31s 00:00:00.74 Elapsed: 00:00:00.51
# Mc/sec: 467.35
//
Query:       EPX70783.1  [L=81]
Description: hypothetical protein SOCG_04174 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.15   12.0   0.1        0.3   11.0   0.1    1.7  1  LAMTOR5   Ragulator complex protein LAMTOR5


Domain annotation for each model (and alignments):
>> LAMTOR5  Ragulator complex protein LAMTOR5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   1.7e-05       0.3       1      40 [.       1      38 [.       1      77 [. 0.89

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 1.7e-05
     LAMTOR5  1 mekqleevldevmskegvvGvlcaDeqGLclgsrGtlsnk 40
                me++l + l++++ +e+ +G++   ++GL ++ +Gt+s +
  EPX70783.1  1 MEENLVQELNKCI-NEKFSGAV-LSRNGLAIAVAGTISPE 38
                9999999999965.55588875.569***********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       423  (0.0235931); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.37s 00:00:00.92 Elapsed: 00:00:00.57
# Mc/sec: 430.96
//
Query:       EPX70784.1  [L=294]
Description: 1-acyldihydroxyacetone phosphate reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.9e-38  130.1   1.9    8.6e-38  129.8   1.9    1.1  1  adh_short     short chain dehydrogenase
    5.3e-28   98.2   0.3    6.4e-28   97.9   0.3    1.1  1  adh_short_C2  Enoyl-(Acyl carrier protein) reductase
    0.00024   20.6   0.5    0.00052   19.5   0.5    1.6  1  Epimerase     NAD dependent epimerase/dehydratase family
  ------ inclusion threshold ------
      0.051   13.5   0.2        0.1   12.6   0.2    1.5  1  ADH_zinc_N    Zinc-binding dehydrogenase


Domain annotation for each model (and alignments):
>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.8   1.9   1.9e-41   8.6e-38       2     190 ..       6     189 ..       5     194 .. 0.94

  Alignments for each domain:
  == domain 1  score: 129.8 bits;  conditional E-value: 1.9e-41
                 EEEEESTTS.HHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHTTSEEEEEE-TTTSHHHHHHHHHHHHHHH.SSESEEEE---SS--SSGGGCSH CS
   adh_short   2 vvlvtGass.GIGraiakelakeGakvvvvdrseekleevakelkeegakalaiqvDvtdreevealvekavkkl.gkldvLvnNAGitgsgpfselse 98 
                  vl+tG+s+ GIG a+a e+ k+G+kv++++r+ e+++++ +e++     + +i +Dv+d ++v+++ + +++++ gkl+ L+nNAG++  +++ +l+ 
  EPX70784.1   6 YVLITGCSEgGIGNALAVEFHKQGFKVIAASRRIETMANL-AEMG-----IRTIVLDVSDTTSVSEAEKVVRSETgGKLHYLINNAGVSMIKAAVDLEI 98 
                 69*****9637*******************9999988444.4444.....99***********************99********************** PP

                 HHHHHHHHHHTHHHHHHHHHHHHHHHHCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHHHHHH CS
   adh_short  99 eewervievNltgvflltravlpamlkqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdmakel 190
                  ++ +++evNl g++ +  a+ ++++ + +G+Iv + S  +  p+   +aYsAsKaa+ +++++l+ elap g++v++v +Gl++T + ++ 
  EPX70784.1  99 PKVHKLMEVNLYGPMRMNTAFQEQLI-RAKGTIVHINSALSYGPMVFSSAYSASKAALLSYANTLRIELAPFGVQVTSVITGLISTSIFEKD 189
                 ************************99.9**********************************************************998875 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.9   0.3   1.4e-31   6.4e-28       4     180 ..      15     187 ..      11     221 .. 0.93

  Alignments for each domain:
  == domain 1  score: 97.9 bits;  conditional E-value: 1.4e-31
                   TSHHHHHHHHHHHTT-EEEEEESSGGHHHHHHHHHHHTTSEEEE--TTSHHHHHHHHHHHHHHH.SSEEEEEE-----EGCSS-GGGH-HHHHHHHH CS
  adh_short_C2   4 sgIGraiAkalaeeGaevvltdlneeakkrveelaeelgaevlecDVtdeeqvealveevvekf.gklDilvnnagiapklkgpfletsreefdral 99 
                    gIG a+A +++++G +v+++ ++ e    +++lae +g + + +DV+d+++v ++ + v++++ gkl++l+nnag++    + +++++  ++++ +
    EPX70784.1  15 GGIGNALAVEFHKQGFKVIAASRRIET---MANLAE-MGIRTIVLDVSDTTSVSEAEKVVRSETgGKLHYLINNAGVSMI--KAAVDLEIPKVHKLM 105
                   69*******************999998...777876.8999********************99999*************9..*************** PP

                   HHHTHHHHHHHHHHHH.HCTSCCEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCTGGG CS
  adh_short_C2 100 dvnlyslfllakaalp.lmkeggsivnlssvgaervvpnynaygaaKaalealtrylAvelgpkgiRvNavspgpikTlaas 180
                   +vnly+ +++  a+++ l++++g iv++ s  +   +   +ay+a+Kaal + + +l  el+p g++v +v  g+i T + +
    EPX70784.1 106 EVNLYGPMRMNTAFQEqLIRAKGTIVHINSALSYGPMVFSSAYSASKAALLSYANTLRIELAPFGVQVTSVITGLISTSIFE 187
                   ****************99999*********************************************************9854 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.5   1.2e-07   0.00052       1     122 [.       7     142 ..       7     179 .. 0.76

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 1.2e-07
                 EEEETT.TSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHCEEEE--TT-HH...HHHHHHHHH...T-SEEEE--S---HHHHHH....SHHHHH CS
   Epimerase   1 ilVtGa.tGfiGsalvkallekgyevigldrlssasntarledlelveldltdrs...alerlfkee...qpdavihlAavggvaasse....dpadfi 88 
                 +l+tG   G iG+al+ ++ ++g +vi+ +r+ ++ ++ ++  ++ + ld+ d +   + e+++++e   + ++ i+ A+v+ ++a ++    +  +++
  EPX70784.1   7 VLITGCsEGGIGNALAVEFHKQGFKVIAASRRIETMANLAEMGIRTIVLDVSDTTsvsEAEKVVRSEtggKLHYLINNAGVSMIKAAVDleipKVHKLM 105
                 68999626************************9999988888889999999999833344555555545578899999999998887662222457899 PP

                 HHHTHHHHHHHHHHHHHTCT...EEEEEEEGGGGTSC CS
   Epimerase  89 eknlqgtlnlleaarkagvk...rllflsSsevYGkd 122
                 e nl g +++  a +++ ++    ++++ S+  YG++
  EPX70784.1 106 EVNLYGPMRMNTAFQEQLIRakgTIVHINSALSYGPM 142
                 9999999999999999966666799999999999954 PP

>> ADH_zinc_N  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.2   2.3e-05       0.1      12      77 ..      27      95 ..      16     101 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 2.3e-05
                HTT-EEEEEESSHHHHHHHHHTT.ESEEEET...TTC.HHHHHHHHHTTTSSEEEEEESSCSHHHHHHHHH CS
  ADH_zinc_N 12 alGaeviavdsseeklelakklG.adeviny...kea.dlverikeltggegvdvvfecvGsgatleaalk 77
                  G++via+++  e  + ++++G  + v++    ++  + ++ +++ tgg ++++ ++ +G  ++++aa++
  EPX70784.1 27 KQGFKVIAASRRIETMANLAEMGiRTIVLDVsdtTSVsEAEKVVRSETGG-KLHYLINNAG-VSMIKAAVD 95
                5799*******************5555666677655556999******55.**********.888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (294 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       490  (0.02733); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.63u 0.30s 00:00:00.93 Elapsed: 00:00:00.53
# Mc/sec: 1668.49
//
Query:       EPX70785.1  [L=706]
Description: endo-1,3-beta-glucanase Eng2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     2e-144  481.2  11.4   2.6e-144  480.8  11.4    1.1  1  Glyco_hydro81C  Glycosyl hydrolase family 81 C-terminal domai
   1.3e-106  356.4   4.6     2e-106  355.8   4.6    1.2  1  Glyco_hydro_81  Glycosyl hydrolase family 81 N-terminal domai
     0.0079   16.1   0.1      0.017   15.0   0.1    1.5  1  Cas_APE2256     CRISPR-associated protein (Cas_APE2256)


Domain annotation for each model (and alignments):
>> Glyco_hydro81C  Glycosyl hydrolase family 81 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  480.8  11.4  4.4e-148  2.6e-144       2     349 .]     349     696 ..     348     696 .. 0.99

  Alignments for each domain:
  == domain 1  score: 480.8 bits;  conditional E-value: 4.4e-148
  Glyco_hydro81C   2 lseealkaiaeaaekelkqdlsaesnldsmYfsGKalakfatlvyvvkellkdeelakaalkkLkealerflenkqklplvYdekwkGvvssagy 96 
                     +s+++l++i++a+e+++k d++++s+++smY sGK+lak+a++++v++++lkd++la+++ +kL++al+rf++nkq++pl Yd+++kG++s+ag+
      EPX70785.1 349 YSNDTLNTIKQACENDIKFDVESASDTNSMYASGKILAKYAQVCLVAAKILKDDNLANTGREKLQKALQRFVDNKQQFPLNYDKTYKGLISTAGL 443
                     8999******************************************************************************************* PP

  Glyco_hydro81C  97 ktdsgaDFGntlyNDHhfHygYfvyaaaviakldpswlek.nkewvntLvrDvanpseedeyfpvsRsfDwyhgHSwakGlfesadGkdqEsssE 190
                     k +  aD+Gnt+yNDHhfHygY+vya+av ++l++ w+++ ++++vn L+rD+anp e+d+yfp++RsfDwy gHSw+kGlf+s+dGkd+Es+sE
      EPX70785.1 444 K-EPLADYGNTYYNDHHFHYGYHVYAMAVAGTLNSGWISDsQTDFVNDLLRDAANPVENDQYFPFFRSFDWYAGHSWSKGLFASGDGKDEESTSE 537
                     9.************************************99788**************************************************** PP

  Glyco_hydro81C 191 dvnaayalklwGkvigdasleargnlmlaiearslqkyflleednkvqpkefignkvaGilfenkvdhttyFgankeyiqgihmlPllpvselir 285
                     d+n++ya+klwG v +++++ a +nlml++ ++s+++y++++ +nk++p+++ gn vaGi+f+nkvd++tyFg +  y+qgihm+P++p+s ++r
      EPX70785.1 538 DYNFYYAMKLWGIVKNNNDIIALANLMLGVIRTSMNSYIYITPKNKIEPEKIRGNYVAGITFMNKVDYATYFGDKVYYKQGIHMIPITPISGYVR 632
                     *********************************************************************************************** PP

  Glyco_hydro81C 286 skkfvkeeweallaeraekveegWkgilyanlalvdpkaayeffsseefkeklldgGasrtWyl 349
                     ++++vke w+a+la ++++ +++W+gi+y+n+a++dp+aa++ f+s++fk++ +d+Gas+tWyl
      EPX70785.1 633 NPTYVKESWDATLAPIIDSFSNSWTGIVYSNYAITDPSAAWKEFTSSNFKDSNIDNGASKTWYL 696
                     ***************************************************************8 PP

>> Glyco_hydro_81  Glycosyl hydrolase family 81 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  355.8   4.6  3.3e-110    2e-106       1     321 [.      21     340 ..      21     343 .. 0.96

  Alignments for each domain:
  == domain 1  score: 355.8 bits;  conditional E-value: 3.3e-110
  Glyco_hydro_81   1 hpvppsgvsesdkpleTNkFYaNllLgdqtqpvythPYslkwskg..kswGlavshteasqrvfgpdksaepasyyvnPigiqslvlsaaelsss 93 
                     hp++p+g+s sdkp++TNk+Y N++Lgdq+ p + +PYsl+w ++  +  Gla+sh++a+q+++gpd s++p++yy+nP+g+ s+++sa+e+ss 
      EPX70785.1  21 HPLQPKGISVSDKPIQTNKYYGNFFLGDQKFPNFPQPYSLTWRNNddHFSGLAISHIDADQYTYGPDASKDPTEYYINPAGLFSIIISANEFSSG 115
                     9*****************************************66655699********************************************* PP

  Glyco_hydro_81  94 tsltvsslkdlsvtvelsasksssssirfpLvqGmgFvTaiysnltpviqsgvgfksveagssvkssvvtkyrvkledgqtWllYatpesssdle 188
                     ++l+ ++ +++sv+++l++s+sss si++p+v G++F++ +y++ltpv++s++++ks+++g+  +    tky+v+l+d+++Wl+Ya+p++ss++e
      EPX70785.1 116 NKLSATDSRHFSVQLTLEPSQSSSGSITIPIVTGSAFISSVYKDLTPVFNSSIFVKSLDKGNIKGG---TKYKVTLNDNKVWLIYAFPSDSSSFE 207
                     ********************999***********************************99855444...7************************* PP

  Glyco_hydro_81 189 ltlesnstiegskefsGiiqvaklp...gedseseavlDeaagvYatgaelsgsvsgeatgsYsfkykkeGkseesgkllmfalPhhlesldeet 280
                     l+++sns++++s++f+G+iq+ k+p    +++  e+v+D++agvY+tg++ls++vs++ tg+Y f+++k+G++  s+++l++alPhh++++ ++t
      EPX70785.1 208 LKKDSNSKLTASSKFNGLIQISKVPvdsVNNGAGEKVYDQYAGVYPTGITLSANVSNN-TGEYWFTFDKAGDK--SKSPLVYALPHHQNTFGSDT 299
                     *************************9986788889**********************9.9***********96..69****************** PP

  Glyco_hydro_81 281 karvtklklrsttkGemtavlgdswtleetnlpvelgfaPw 321
                     ++++t+l+l++t++G ++a+++d+w+l+e+nlp++++f+P 
      EPX70785.1 300 QKAKTSLSLQTTVMGAAVAYAADKWHLVENNLPTDVEFLPL 340
                     **************************************984 PP

>> Cas_APE2256  CRISPR-associated protein (Cas_APE2256)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.1   2.9e-06     0.017      29      93 ..     372     435 ..     353     448 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 2.9e-06
  Cas_APE2256  29 ssdTaaGklvaeilkeyleeegaevevveieklsdlgreeFreglrnLveklarevknkkregek 93 
                  +sdT+   ++++il++y + + ++ ++ +  +l++ gre+++++l+  v++ ++   n  ++ +k
   EPX70785.1 372 ASDTNSMYASGKILAKYAQVCLVAAKILKDDNLANTGREKLQKALQRFVDNKQQFPLN-YDKTYK 435
                  79***********************************************998887554.344444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (706 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       443  (0.0247086); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.30s 00:00:00.89 Elapsed: 00:00:00.45
# Mc/sec: 4745.61
//
Query:       EPX70786.1  [L=429]
Description: SWI/SNF and RSC complex subunit Arp42 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   5.5e-136  453.4   0.0   6.2e-136  453.2   0.0    1.0  1  Actin         Actin
    6.2e-08   31.8   0.0    0.00019   20.4   0.0    2.1  2  MreB_Mbl      MreB/Mbl protein
  ------ inclusion threshold ------
       0.06   13.1   0.3        4.1    7.2   0.1    2.4  2  PHF12_MRG_bd  PHD finger protein 12 MRG binding domain


Domain annotation for each model (and alignments):
>> Actin  Actin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  453.2   0.0    1e-139  6.2e-136       3     407 .]      10     429 .]       8     429 .] 0.97

  Alignments for each domain:
  == domain 1  score: 453.2 bits;  conditional E-value: 1e-139
       Actin   3 evsavVlDnGssttraGyagedaPkavipslvgkprgrkveaklyvgdealt.krpelevrspvedGvvedwdaveelwehvlkeelkvdpeehplllt 100
                 e++a+V+D+G+++tr+G+age++P++++ps +g+ +g++ e k  v++ +++ + p++e+++ ++dG+++dw+++ +lw++ lk++lkvdp+e+ +++t
  EPX70786.1  10 EIPALVIDPGTCWTRFGFAGEESPEVILPSNYGVLQGENGERKSIVDELQIHaPIPGMEITNGINDGIIQDWESTLQLWNRGLKDKLKVDPTEYAMMIT 108
                 789*************************************************88********************************************* PP

       Actin 101 epplnppkqrekalEivfEkfkvpalylaksavlsafasgkstglvvDsGasvtsvvpVldGyvLkkairrsdlgGkaLteqlkellssknvevtpryl 199
                 ep++n+++ r++++E vfE+++ pa+yl+k+av++afas k+t+l+vD+G ++t+v+pV+dG++++k+i++++++G++L+e++k+l+s+++++v p+y+
  EPX70786.1 109 EPSWNTQSVRQQTMETVFEQLHAPAFYLTKQAVCAAFASNKATALIVDLGTDNTTVTPVVDGIAMRKGIVKQKIAGNFLNENIKSLFSKMSINVLPHYR 207
                 *************************************************************************************************** PP

       Actin 200 ikkkkvveaessae..........keelekltesyktleeeevleeiKesvcevsedpegdeeksssspeksYeLPDgseiklgeeRfkvpEiLFdpsl 288
                 +++k+ v ++s +            +++  lt+sy+ ++++++lee+Kesv+e  e p+ de k+s+++ k++e+PDgs++++g +Rf+v E+LF+ps 
  EPX70786.1 208 VARKSIVIESSGPGnpeevkpavfYDSIDGLTDSYNDFQNKRILEEWKESVLETLEFPF-DELKASTKNPKHFEFPDGSNYQFGIDRFRVGEVLFNPSF 305
                 *****99877666567889999999999****************************999.99999999******************************* PP

       Actin 289 igsesaleee.kskllgiselivaainacdvdlrpeLlanivvtGGnsllpglteRlekelaqlaskgvkvkiiapee..erkysaWiGGSiLAslgtf 384
                 +  ++ +e++ ++++  +++l++++i ac+ ++r++L++ni++tGG+sl+pglteRl+ el++ + +g +v+++++++   r++++W+GGSiLAsl++f
  EPX70786.1 306 AFRDNLPENTvPENAIELHNLVYQSILACESEIRSQLFSNIILTGGTSLIPGLTERLQFELQR-LAPGNRVNVHTSGDsiYRSNASWLGGSILASLDNF 403
                 9999886666799**************************************************.8999*********999******************* PP

       Actin 385 qqlwvskqEYeEqGss...vverkck 407
                 q+lwvskqEY+E G++   +ve++ck
  EPX70786.1 404 QHLWVSKQEYDEVGVDrglFVEKRCK 429
                 ****************9999*****7 PP

>> MreB_Mbl  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0   3.2e-08   0.00019      58     189 ..      68     196 ..      64     255 .. 0.83
   2 !    9.4   0.0   6.8e-05       0.4     253     297 ..     323     366 ..     311     380 .. 0.83

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 3.2e-08
                 EEE-SEETTEESSHHHHHHHHHHHHHHHHTSS-SS--EEEEEE-SS--.HHHHHHHHHHHHHTT-SEEEEEEHHHHHHHHTT--TTSSS-EEEEEE-SS CS
    MreB_Mbl  58 kavrPlkdGviadlevaeellkyfikkvkkkkslskprvvicvPsgit.everrAvkeaakkaGarevllieeplaAAiGaglpveepsgnmvvdiGgg 155
                 +++  ++dG+i+d e + +l ++ +k+  k    ++  ++i+ Ps  t +v ++ ++ + +++ a   +l ++++ AA  ++      +  ++vd+G  
  EPX70786.1  68 EITNGINDGIIQDWESTLQLWNRGLKDKLKV-DPTEYAMMITEPSWNTqSVRQQTMETVFEQLHAPAFYLTKQAVCAAFASN-----KATALIVDLGTD 160
                 5667789************999998887765.4567889999999655279999************************9875.....5678******** PP

                 -EEEEEEETTEEEEEEEE...S-SHHHHHHHHHHHHH CS
    MreB_Mbl 156 ttevavislggivtsksv...rvaGdeldeaiikyir 189
                  t v+ + + gi + k +   ++aG+ l+e+i ++  
  EPX70786.1 161 NTTVTPV-VDGIAMRKGIvkqKIAGNFLNENIKSLFS 196
                 **99865.35555555443448**********87654 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 6.8e-05
                 HHHHHHHHHHTS-HHHHHHHHHH-EEEESGGGGSBTHHHHHHHHH CS
    MreB_Mbl 253 iveavkevLektppeLaadivdrgivltGGgallkgldkllseet 297
                 + + v + + ++  e+ + ++ + i+ltGG++l+ gl + l+ e+
  EPX70786.1 323 LHNLVYQSILACESEIRSQLFSN-IILTGGTSLIPGLTERLQFEL 366
                 56667777778999999999876.99*************998766 PP

>> PHF12_MRG_bd  PHD finger protein 12 MRG binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0    0.0098        59      29      39 ..      57      67 ..      56      68 .. 0.89
   2 ?    7.2   0.1   0.00069       4.1       8      27 ..     265     282 ..     260     288 .. 0.81

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.0098
  PHF12_MRG_bd 29 ElecttpfPGt 39
                  El+++ p PG 
    EPX70786.1 57 ELQIHAPIPGM 67
                  9*********5 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.00069
  PHF12_MRG_bd   8 PldlLirAAslmNPkQFeLP 27 
                   P+d L   As +NPk Fe P
    EPX70786.1 265 PFDEL--KASTKNPKHFEFP 282
                   66666..5899*******99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (429 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       333  (0.0185733); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.38
# Mc/sec: 3360.43
//
Query:       EPX70787.1  [L=339]
Description: U1 snRNP-associated protein Usp108 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.19   11.8   0.1       0.56   10.3   0.0    1.7  2  SBDS      Shwachman-Bodian-Diamond syndrome (SBDS) protein


Domain annotation for each model (and alignments):
>> SBDS  Shwachman-Bodian-Diamond syndrome (SBDS) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.29   5.2e+03      67      80 ..      52      65 ..      22      69 .. 0.44
   2 ?   10.3   0.0   3.1e-05      0.56      27      73 ..     280     327 ..     269     335 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.29
                HHHHHHHHHHHSEE CS
        SBDS 67 kdeiikeILkkGei 80
                ++e  k IL  G+i
  EPX70787.1 52 EEEEQKSILLDGQI 65
                33444566666665 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 3.1e-05
                 HCTT---HHHHBSSSS-EEETTTTEE--HHHHHHHHS--.-HHHHHHH CS
        SBDS  27 regkeidLsevlqsekiFtnaskGetaskselekafgte.skdeiike 73 
                   +  ++L+e+ qs ++    ++G+  sk +l ++ gt+ s++ ++ +
  EPX70787.1 280 LAEVPTKLDEISQSANVHIGIEHGDPQSKVTLLNVTGTSeSNQTALMT 327
                 5567899********************************666655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (339 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       562  (0.0313459); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.28s 00:00:00.78 Elapsed: 00:00:00.46
# Mc/sec: 2198.31
//
Query:       EPX70788.1  [L=267]
Description: 20S proteasome component beta 2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-47  162.1   0.0    1.3e-47  161.8   0.0    1.1  1  Proteasome  Proteasome subunit
    6.2e-12   44.7   0.7    6.2e-12   44.7   0.7    1.8  2  Pr_beta_C   Proteasome beta subunits C terminal


Domain annotation for each model (and alignments):
>> Proteasome  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  161.8   0.0   1.4e-51   1.3e-47       2     190 .]      33     213 ..      32     213 .. 0.97

  Alignments for each domain:
  == domain 1  score: 161.8 bits;  conditional E-value: 1.4e-51
                 HHS-EEEEEEETTEEEEEEEEEEEETTEEEESSSSTSEEEEETTEEEEEEESHHHHHHHHHHHHHHHHHHHHHHSSGTCHHHHHHHHHHHHHHHHHHCT CS
  Proteasome   2 kkGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigvafaGlaaDartlvrraraeaqlyrlrygrpipverlvarvaaklqaytqrsg 100
                 ++Gtt+vG+ +kd++vl+ad+ratag ++++k+ ++K++ i+++i++a aG+aaD++ ++++++++++l+++  +r+++v      ++ +++++ + ++
  EPX70788.1  33 STGTTIVGVIAKDCIVLGADTRATAGPIIADKN-CRKLHLISPNIWCAGAGTAADTEFVTSMISSNVELHSMYVNRKPRVV-----TSLTMLKQHLFRY 125
                 68***************************7777.***********************************************.....8999999999999 PP

                 TTTTSEEEEEEEEETTTEEEEEEEETTSEEEEESSEEEESTTHHHHHHHHHHHHSTTBSHHHHHHHHHHHHHHHHHHBTTSCSSEEEEEE CS
  Proteasome 101 rrpfgvslliagvdeeggpeLyqidpsGsyieekdavaiGsgseaaktalekeykedltleeavelavkalkealerdklsgknievavi 190
                 ++++g+ l+++g+d +g p+L++i  +Gs+ +  ++va Gsgs aa+++le +yk++l++ ea+el+++a+++++ +d  sg+n++++vi
  EPX70788.1 126 QGYIGAYLVLGGYDCKG-PHLFTIAAHGSSDKL-PYVALGSGSLAAISILETKYKPNLERHEAMELVREAIEAGIFNDLGSGSNCDLVVI 213
                 **************999.***************.6****************************************************997 PP

>> Pr_beta_C  Proteasome beta subunits C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   1.4       1.3   1.1e+04      16      20 ..      35      39 ..      34      39 .. 0.84
   2 !   44.7   0.7     7e-16   6.2e-12       1      34 [.     227     259 ..     227     260 .. 0.94

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 1.3
                TSS-E CS
   Pr_beta_C 16 GTTaV 20
                GTT V
  EPX70788.1 35 GTTIV 39
                9**88 PP

  == domain 2  score: 44.7 bits;  conditional E-value: 7e-16
                 TTS-S--SS-----TTSS-EEEEEEE-SSSS--- CS
   Pr_beta_C   1 PNekgeRqgsYkfkrGTTaVLkekVplklevvee 34 
                 PNe+ +++++Yk++rGTTaVL e++  k+  ve+
  EPX70788.1 227 PNERAKKEQNYKYERGTTAVLREDI-HKFVTVET 259
                 9************************.88888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (267 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       487  (0.0271627); expected 358.6 (0.02)
Passed bias filter:                      451  (0.0251548); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.32s 00:00:00.84 Elapsed: 00:00:00.50
# Mc/sec: 1621.62
//
Query:       EPX70789.1  [L=1300]
Description: nucleoporin Nup146 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-12   47.5   0.0    3.1e-12   46.4   0.0    1.5  1  NUP214    Nucleoporin or Nuclear pore complex subunit NUP214=
  ------ inclusion threshold ------
       0.12   12.6   1.1        1.2    9.4   0.1    2.9  2  XhlA      Haemolysin XhlA


Domain annotation for each model (and alignments):
>> NUP214  Nucleoporin or Nuclear pore complex subunit NUP214=Nup159
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.4   0.0   3.5e-16   3.1e-12      19     336 ..      62     399 ..      53     422 .. 0.61

  Alignments for each domain:
  == domain 1  score: 46.4 bits;  conditional E-value: 3.5e-16
                 EEEETTTTEEEEEETTEEEEEEHHHHHHHHHS...SS-----SEEEE-TTEE.......EEEEETTE...EEEEESS.EEEEEESSSTT...EEEEEE- CS
      NUP214  19 ldisnkkslyvaasGekvviGdlqkLrdvits..edkaelefkwekeikdvi.......avkflnde..vvlvstks.ellsldleels..eleeihkl 103
                 ++i+n  +++va   + +v+G +  L++++++   +  + +     ei ++        +v f+++   +v  s +s el+ +++ +    +++   kl
  EPX70789.1  62 FAIHNPSGRFVAGVPNGLVLGPVSFLHKFLDEapMNAGPQQLPLSSEIVQLTipnagfsFVDFTSNGtyIVAYSLSSqELIVFNTASCLlgNVNPHWKL 160
                 577777777777777777777777777777775422223333333333322211111114555444422121122221333333333221122222222 PP

                 SS-EE..EE...ETTEEEEEETTS.EEEEEETT.....EEEECSEEEEEE-S..SEEEEEETTS-EEEEEEEEEEE...EEE---HHHHTS-TTTSEEE CS
      NUP214 104 ekdlvelkl...lkstlllldsnn.qLsaldlskkel.kslaenvasfDvle..dkLvvllkdksvqvfeleneeeekskelslPselkeelkdeyepl 195
                 +++ v+l l    ++ l++l+ n  ++ ++++s++ +  ++ ++ +++   +  ++ ++ l++  +  +  ++   + +ke++ Psel+e ++      
  EPX70789.1 161 QMSNVDLILpnpEDDDLVALHLNTlEVCIFSISQSTVhPPIVKEATTVAWSRrgKQCAAGLTNGYIGQYTPDG---QCKKEIAPPSELQEYFV-----Q 251
                 2222222223333344444443321333444444444333444333333222002222222222222222222...24689999999988766.....7 PP

                 EEEESSSSEEEEEEES---SS-SS----EEEEEEEEE.TTEEEEEEESSS------S-----EEEEEEETSSSTT-EEEEEEETT-SB-EEE....-SS CS
      NUP214 196 sikvLskqeylvvfGnkvseteedvsyDhklyivkkk.deevsfqesfDitPafgsvlryPtvyniilkglieedknvnilasacsseitiw....dsk 289
                 +i  ++++e++v +  +   t++d  ++   yi++   d++v+++ + D tP+fg   r+   y   l+    +   + i++++ ss+i ++    ds+
  EPX70789.1 252 DIAWVQNREFIVYYSPTSTLTSSDPEHESVCYIISLGlDQSVTYKTATDPTPPFGADYRHDHHYFSFLQSWSPNLFSLAIVSATSSSDIGLFahlvDSN 350
                 89999*****9999999999**************9752777************************************************9863333444 PP

                 ..SEEEESSGGGS-B--B-TTTSSB--ECEEEEE-S------------- CS
      NUP214 290 ..evvePsqDseravlPisketdnDtnPiGvalDvvtsGviaePCsGvD 336
                   + +  s +++ra lP s++ ++Dt+P+ ++lD++ s  +++P s  +
  EPX70789.1 351 swKSLIISEETKRASLPYSQKKEQDTSPLALSLDLTSSERVQKPLSPAE 399
                 2245667899*******************************99987554 PP

>> XhlA  Haemolysin XhlA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.1      0.11     1e+03      12      46 ..     847     886 ..     842     888 .. 0.76
   2 ?    9.4   0.1   0.00014       1.2       4      46 ..    1175    1219 ..    1174    1221 .. 0.92

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.11
        XhlA  12 kldnlee.....rvdkleekaaeaeekiknleedlkkles 46 
                 +l ++ e     +v kl  +++ + + i++l++d ++  s
  EPX70789.1 847 DLGDHAEpentaDVPKLSSDNDQQSSYIEELNDDTDEVVS 886
                 5555555555668999****************99877665 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00014
        XhlA    4 erlerietkldnlee..rvdkleekaaeaeekiknleedlkkles 46  
                  er++++ t  +n+    r+++++++++  +++i+ ++ +++++ s
  EPX70789.1 1175 ERVQKLMTSAENMAYdvRLTDVQNRKRLSLASIEVACSRIASIVS 1219
                  78899999999999889**************************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1300 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1005  (0.0560544); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.81u 0.29s 00:00:01.10 Elapsed: 00:00:00.46
# Mc/sec: 8559.33
//
Query:       EPX70790.1  [L=373]
Description: glycerol-3-phosphate dehydrogenase Gpd2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.7e-53  178.3   0.1    3.1e-52  176.7   0.0    1.7  2  NAD_Gly3P_dh_N  NAD-dependent glycerol-3-phosphate dehydrogen
    1.1e-45  155.4   0.0      2e-45  154.6   0.0    1.5  1  NAD_Gly3P_dh_C  NAD-dependent glycerol-3-phosphate dehydrogen
     0.0032   18.0   0.1        3.4    8.3   0.0    2.5  2  F420_oxidored   NADP oxidoreductase coenzyme F420-dependent


Domain annotation for each model (and alignments):
>> NAD_Gly3P_dh_N  NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  176.7   0.0   5.2e-56   3.1e-52       1     154 [.      26     197 ..      26     200 .. 0.97
   2 ?   -1.4   0.0      0.35   2.1e+03     118     140 ..     318     338 ..     309     341 .. 0.72

  Alignments for each domain:
  == domain 1  score: 176.7 bits;  conditional E-value: 5.2e-56
                     -EEEE--SHHHHHHHHHHHTTT........--EEEE-S-H.........HHHHHHHHHSSBTTTBTT----TTEEEES-HHHHHTT--EEEE--- CS
  NAD_Gly3P_dh_N   1 kiavlGaGswGtalAkvlaeng........hevrlwvree.........elieeineehenvkyLpgiklpenlvattdlaealkgadiivlvvP 78 
                     +++v+G+G+wGta+Ak+++en+        ++v++w++ee         +l+e++n++hen kyL+g+++p+n+ a++d++++ +++d++v+v+P
      EPX70790.1  26 SVGVIGSGNWGTAIAKICGENAeahpelfhPQVHMWMYEEnveyhgenrKLTEVFNSTHENIKYLKGVQCPSNVYANPDIRDVGARSDVLVWVLP 120
                     599**************************99**************************************************************** PP

                     HHHHHHHHHHHCCC--TT-EEEE---SE..ET.TTEEHHHHHHHHH-S--EEEEESS--HHHHHTT--EEEEEEES-H CS
  NAD_Gly3P_dh_N  79 sqalrevlkklkgllkkkailvsliKGi..eegtlkllsevieeelkeekvavlsGpslAeEvakgkptavviaskdk 154
                     +q++ +v+++lkg+lkk+a+++s+iKG+  + ++++l+s++i+e ++++ ++vlsG+++A+Evak+k+++++i+++  
      EPX70790.1 121 HQFVVRVCDQLKGHLKKDAVAISCIKGVsvNSDRVRLFSDIIHERTGMY-CGVLSGANIASEVAKEKFCETTIGYDPD 197
                     ****************************888899***************.***********************99765 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.35
                     HHHHH-S--EEEEESS--HHHHH CS
  NAD_Gly3P_dh_N 118 ieeelkeekvavlsGpslAeEva 140
                     +e+el +     l G+  A+Ev 
      EPX70790.1 318 LEKELLNG--QKLQGAATAKEVH 338
                     45444444..47999*****996 PP

>> NAD_Gly3P_dh_C  NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  154.6   0.0   3.3e-49     2e-45       1     141 [.     225     370 ..     225     371 .. 0.91

  Alignments for each domain:
  == domain 1  score: 154.6 bits;  conditional E-value: 3.3e-49
                     -HHHHHHHHHHHHHHHHHHHHHHHTTH-HHHHHHHHHHHHHHHHHHHHHHTS.SGGGGG.STTTHHHHHHHHHSCT.HHHHHHHHHHC.T--HHH CS
  NAD_Gly3P_dh_C   1 DviGvelagalKNviAiaaGivdglglgdntkaalitrglaEmarlakalga.kpetfl.glaglgDlivtctsgksRNrrfGeelgk.geslee 92 
                     Dv Gv l+galKN++A+aaGi+dgl+lgdntk+a++++gl+Em++++ ++   ++ t+  +++g++Dli+tc++g  RNr+++ +++k g+ ++ 
      EPX70790.1 225 DVPGVALGGALKNIVAVAAGIIDGLELGDNTKSAIMRIGLSEMQKFGAMFFDcDRLTMSeESCGIADLITTCLGG--RNRKCAVAFVKtGKPMHI 317
                     999********************************************9996545778889***************..***********6555555 PP

                     HHH.HHC.C--HHHHHHHHHHHHHHHT.T..G.HHHHHHHHHHHS---HHHHH CS
  NAD_Gly3P_dh_C  93 iek.eln.qvleGvetakevyellkkk.gv.emplleavykilyegkspeeli 141
                     +ek  ln q+l+G+ takev+e+l+++ +v e+pl++avy+i++++++p++l+
      EPX70790.1 318 LEKeLLNgQKLQGAATAKEVHEFLEHQnKVdEFPLFKAVYDIVFKNLPPNKLL 370
                     66687888***************99984569******************9986 PP

>> F420_oxidored  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0   0.00057       3.4       2      21 ..      27      46 ..      26      53 .. 0.84
   2 !    7.2   0.0    0.0013       7.5      52      95 ..     103     145 ..      70     147 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00057
                   EEEETTSHHHHHHHHHHHHT CS
  F420_oxidored  2 igiiGaGnmgealasgllaa 21
                   +g+iG+Gn g a+a+ + ++
     EPX70790.1 27 VGVIGSGNWGTAIAKICGEN 46
                   8*************977665 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0013
                    CECHHHHHHH-SEEEE-S-HHHHHHHHHHCGHHHHTTSEEEEES CS
  F420_oxidored  52 avdneeaaeeadvvvlavkpedveevlselakdalkgklvisvl 95 
                    + d  ++ +++dv+v  ++ + v  v+++l+ +++k+ + is+ 
     EPX70790.1 103 P-DIRDVGARSDVLVWVLPHQFVVRVCDQLKGHLKKDAVAISCI 145
                    4.66788889********************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (373 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       447  (0.0249317); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2762.49
//
Query:       EPX70791.1  [L=467]
Description: GTPase activating protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.9e-29  100.5   5.3    9.9e-29  100.5   5.3    1.9  2  RabGAP-TBC  Rab-GTPase-TBC domain
    3.2e-07   29.0   0.5    4.5e-07   28.5   0.5    1.1  1  SBE2        SBE2, cell-wall formation
  ------ inclusion threshold ------
       0.38   10.4   2.0         20    4.8   0.1    3.1  3  HTH_Bact    Helix-turn-helix bacterial domain


Domain annotation for each model (and alignments):
>> RabGAP-TBC  Rab-GTPase-TBC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.6       0.2   1.2e+03      28      49 ..     168     182 ..     139     198 .. 0.52
   2 !  100.5   5.3   1.7e-32   9.9e-29       2     214 ..     214     432 ..     213     433 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.2
  RabGAP-TBC  28 qeksekeksklekseeskelsq 49 
                 + k++++++k++       ++ 
  EPX70791.1 168 KIKQMEQQRKKN-------QQL 182
                 222222222222.......332 PP

  == domain 2  score: 100.5 bits;  conditional E-value: 1.7e-32
  RabGAP-TBC   2 elRgevWklllgyep.....evkrlkksekkqeksekeksklekseeskelsqIkkDvprtfpes.esfknkqgqnqLeriLkaysiynpevgYcqGmn 94 
                 ++Rg++W+ ++g+       +   + + +kk  +s+++ + +e++  + + s+++ D++ t+p+   ++k + ++++L ++ +a+s y+ +v Y++G  
  EPX70791.1 214 RIRGKAWQKIIGNPLqldyqSFFLACECAKKIAHSNENIQTQETNMFRYDKSALEVDIECTMPQLhLFQKGEALHKDLVQLVSAFSAYRYNVRYVPGST 312
                 58***********667776522233333445566677777777777788899***********433666666*************************** PP

  RabGAP-TBC  95 divaplllvsldeeeaFwcfvsLlekyklrdlytsslpglkrklkvleellkkkdpklykhlke.egldlelfaikwfltlflrefpletvlrlwD.ll 191
                 +i a+ll ++++ ++aF+++v+Ll++  ++ +yt++ + l ++ +++   lkk +p+l++h++  +++++++++++ ++  f+   ++e+++r++D +l
  EPX70791.1 313 FIGALLL-LNMNLTSAFNAMVNLLDRPFMQAVYTQDKEALASFTNLFLSSLKKSLPELATHFQFtLQIQPDQYLYPLLQRFFIPMNSVEISSRIMDcYL 410
                 *******.8889999***********************************************6549******************************666 PP

  RabGAP-TBC 192 legekfvllrvalailklleeel 214
                 +e++ f l++v +a+++ l+ +l
  EPX70791.1 411 FEEDPF-LIKVFVALFSQLKYKL 432
                 677777.*********9988777 PP

>> SBE2  SBE2, cell-wall formation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.5   0.5   7.4e-11   4.5e-07     452     567 ..     120     238 ..     101     273 .. 0.74

  Alignments for each domain:
  == domain 1  score: 28.5 bits;  conditional E-value: 7.4e-11
        SBE2 452 senkldvvshsrpswlppkdpeekklherqisksl.svasldqleknkdreeklikdetnrqkyvllldrditrn..sslqslkkl.iwetplsaetrs 546
                 s++k  v+s  rpswlppk + e k h r+ ++   s    d+l+ +k++ +++ ++   +q+ + l dr i r    sl s k   +w   +   +r 
  EPX70791.1 120 SKEKQAVLSVGRPSWLPPKSKAEEKRHLREFEQIRkSALKHDKLN-EKEKIKQMEQQRKKNQQLIQLWDRYIFRYwpDSLTSSKVAgVWREGIPLRIRG 217
                 789999*********************998877541344555654.4666667777777889999********95336787766434999999999998 PP

        SBE2 547 siydevlqsevrliteryies 567
                 + +++++    +l  + +  +
  EPX70791.1 218 KAWQKIIGNPLQLDYQSFFLA 238
                 888888776666655555555 PP

>> HTH_Bact  Helix-turn-helix bacterial domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.1    0.0034        20      29      48 ..     235     254 ..     229     255 .. 0.80
   2 ?   -1.2   0.0      0.26   1.5e+03      30      39 ..     281     290 ..     277     293 .. 0.82
   3 ?    3.0   0.0     0.013        78      28      42 ..     444     458 ..     440     463 .. 0.89

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0034
                 HHHHHHHHHHTT--HHHHHH CS
    HTH_Bact  29 yYqkgecleklgfseeeIke 48 
                 ++   ec +k+++s+e+I+ 
  EPX70791.1 235 FFLACECAKKIAHSNENIQT 254
                 44458*************85 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.26
                 HHHHHHHHHT CS
    HTH_Bact  30 Yqkgeclekl 39 
                 +qkge l k+
  EPX70791.1 281 FQKGEALHKD 290
                 7*****9985 PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.013
                 HHHHHHHHHHHTT-- CS
    HTH_Bact  28 LyYqkgecleklgfs 42 
                 L+Yq+ e+ e+++f 
  EPX70791.1 444 LFYQRWELGEEDEFM 458
                 9*********99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (467 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1418  (0.0790897); expected 358.6 (0.02)
Passed bias filter:                      597  (0.033298); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 3271.71
//
Query:       EPX70792.1  [L=340]
Description: DNA replication factor C complex subunit Rfc2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.7e-16   58.7   0.1    1.2e-15   57.7   0.1    1.5  1  Rep_fac_C        Replication factor C C-terminal domain
      4e-15   56.4   0.0      8e-15   55.4   0.0    1.5  1  AAA              ATPase family associated with various cellul
      9e-13   48.3   0.0    9.3e-11   41.8   0.0    2.3  1  DNA_pol3_delta2  DNA polymerase III, delta subunit
    3.3e-05   24.1   0.0    8.3e-05   22.9   0.0    1.8  1  AAA_assoc_2      AAA C-terminal domain
    9.4e-05   22.3   0.0    0.00018   21.3   0.0    1.4  1  DNA_pol3_delta   DNA polymerase III, delta subunit
    0.00012   22.5   0.4       0.01   16.3   0.0    2.8  3  AAA_16           AAA ATPase domain
    0.00031   20.0   0.0    0.00092   18.4   0.0    1.6  2  DUF815           Protein of unknown function (DUF815)
    0.00036   20.5   0.1    0.00073   19.5   0.0    1.5  1  Rad17            Rad17 P-loop domain
    0.00078   19.2   0.1     0.0021   17.8   0.0    1.7  2  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    0.00083   19.6   0.1       0.09   13.0   0.1    2.4  1  AAA_22           AAA domain
     0.0015   18.4   0.1     0.0036   17.1   0.1    1.7  1  AAA_11           AAA domain
     0.0028   18.0   0.2      0.035   14.4   0.0    2.4  2  AAA_19           AAA domain
     0.0044   16.5   0.1     0.0077   15.8   0.1    1.4  1  AAA_7            P-loop containing dynein motor region
     0.0046   16.7   0.0     0.0092   15.7   0.0    1.5  1  AAA_24           AAA domain
      0.005   16.6   0.0      0.017   14.8   0.0    1.8  2  AAA_30           AAA domain
     0.0059   16.0   0.0       0.14   11.5   0.0    2.3  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
  ------ inclusion threshold ------
      0.026   13.7   0.0       0.19   10.9   0.0    2.0  1  DUF2075          Uncharacterized conserved protein (DUF2075)
      0.031   14.3   0.0      0.082   12.9   0.0    1.6  1  AAA_5            AAA domain (dynein-related subfamily)
      0.043   13.7   0.0       0.11   12.3   0.0    1.7  1  AAA_3            ATPase family associated with various cellul
       0.06   13.6   0.0      0.098   12.9   0.0    1.5  1  AAA_28           AAA domain
      0.068   13.7   0.0      0.096   13.2   0.0    1.4  1  AAA_23           AAA domain
      0.088   13.2   0.0       0.19   12.1   0.0    1.6  1  RNA_helicase     RNA helicase
       0.11   11.4   0.0       0.14   11.1   0.0    1.3  1  Kinesin          Kinesin motor domain
       0.13   12.3   0.0       0.49   10.4   0.0    1.9  2  ResIII           Type III restriction enzyme, res subunit


Domain annotation for each model (and alignments):
>> Rep_fac_C  Replication factor C C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.7   0.1   1.6e-18   1.2e-15       2      87 ..     250     334 ..     249     334 .. 0.95

  Alignments for each domain:
  == domain 1  score: 57.7 bits;  conditional E-value: 1.6e-18
                 -HHHHHHHHHHHHHT-HHHHHHHHHHHHHHC---HHHHHHHHHHHGCCS..S-HHHHHHHHHHHHHHHHHHHCTH-HHHHHHHHHH CS
   Rep_fac_C   2 hpteieeileaclngdfeeaykklrellvekGysaediltqlhrvvkeqeelpeaqkleilellgeiekrlveGasehlqlsalla 87 
                 + ++i+ +l+++  +++ ++++  r ++ ++Gys   il+qlh+v++++e+l+  +k +i  +l+e++krl++Ga+e lql++ll+
  EPX70792.1 250 PSSIIRGLLDTAYTKNIVKIEAMTR-EVEAEGYSTGIILSQLHDVLISEETLSSPAKHKIFLKLSEVDKRLTDGADESLQLLDLLS 334
                 678899999***99**********8.***********************99**********99********************985 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.4   0.0   1.1e-17     8e-15       1     129 [.      55     179 ..      55     182 .. 0.86

  Alignments for each domain:
  == domain 1  score: 55.4 bits;  conditional E-value: 1.1e-17
                 EEEESSTTSSHHHHHHHHHHHH......THEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTS......TS.EEEEEETGGGHHHHHTTCCCHHHHHHH CS
         AAA   1 vllyGppGtGKTllakavakel......gvefleisgsellskyvgesekkirelfkeakeka......kp.silfiDEidalaksrsgseseeeervv 86 
                 +l+yG pGtGKT+++ a+a+el      ++++le+++s+ +   ++   +k++ + k+  +++       p +i+++DE+d+++++            +
  EPX70792.1  55 MLFYGSPGTGKTSTILALARELfgpqlmKSRILELNASDER--GISIIRDKVKTFAKTTVSNSvdgypcPPfKIIILDEADSMTQDA-----------Q 140
                 89*******************65555559************..666667777777766666667789*8778***********9888...........* PP

                 HHHHHHHHHTTTSSSTEEEEEEESSGGGSTHHHHSTTSSEEEE CS
         AAA  87 nqLlteldgvkkkeskvivigatnrpdkldpallrgRfdrkie 129
                 ++L + ++ + k    + +++++n++ ++ ++l  +R+++  +
  EPX70792.1 141 AALRRTMEMYAK---ITRFCLICNYMTRIIDPLA-SRCSKYRF 179
                 ***********9...478****************.9*998665 PP

>> DNA_pol3_delta2  DNA polymerase III, delta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.8   0.0   1.2e-13   9.3e-11       2     162 ..      36     182 ..      35     183 .. 0.81

  Alignments for each domain:
  == domain 1  score: 41.8 bits;  conditional E-value: 1.2e-13
  DNA_pol3_delta2   2 qeealkilskalksgrlahayLfeGdegigkkelalnlakallceeknetkpcgecksckkieqgkhpDvivieteekersikldqirelieel 95 
                      qe ++++l+k l s +l h +Lf+G+ g+gk ++ l+la++l+  +  ++        + +++  +   + +i+++ k  +  + ++ +  +  
       EPX70792.1  36 QEATVQVLKKTLLSSNLPH-MLFYGSPGTGKTSTILALARELFGPQLMKS-------RILELNASDERGISIIRDKVK--TFAKTTVSNSVDGY 119
                      788999***********99.79*********************9999866.......344444444444444444444..55555555544444 PP

  DNA_pol3_delta2  96 srkpreskkkiiiiedaekmtksAaNalLktlEEPsenaifiLitsdtnklLktirSRcqelkfspl 162
                               kiii+++a+ mt+ A+ al +t+E   + + f Li +  +++++++ SRc +++f+pl
       EPX70792.1 120 PCP----PFKIIILDEADSMTQDAQAALRRTMEMYAKITRFCLICNYMTRIIDPLASRCSKYRFKPL 182
                      444....469*******************************************************97 PP

>> AAA_assoc_2  AAA C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.0   1.1e-07   8.3e-05       3      47 ..     198     238 ..     196     275 .. 0.82

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 1.1e-07
                  X.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXX CS
  AAA_assoc_2   3 kklkleddalealaeladGDaRkaLnlLElaaeaaeakegkieit 47 
                  +++++e  +++al+e+++GD+Rka++ L+ aa+ ++     + it
   EPX70792.1 198 QNVQMETGVVDALVEYSGGDMRKAITFLQSAATLHQG----TPIT 238
                  6899*************************99988764....3333 PP

>> DNA_pol3_delta  DNA polymerase III, delta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.0   2.4e-07   0.00018      59     166 ..     125     222 ..     123     227 .. 0.89

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 2.4e-07
                     EEEEEE--.....TT-S-TTHHHHHHHHTTT--SSEEEEEEES.S--HHHHHHHHHTTTEEEEEE----TTTHHHHHHHHHHHTT-EE-HHHHHH CS
  DNA_pol3_delta  59 rivvlknpklltkesklnekllkeLeeylsnlpedtlLiliapkklderkklvklLkkkatvveaktlkeeelkkwiqkraqelglkiekealel 153
                     +i++l+ +      ++ +++ +++L ++++ + + t ++li++      +++++ L+++ +  ++k+l++e++kk ++ +a+++++++e+ +++ 
      EPX70792.1 125 KIIILDEA------DSMTQDAQAALRRTMEMYAKITRFCLICN----YMTRIIDPLASRCSKYRFKPLDSENIKKRLEFIATDQNVQMETGVVDA 209
                     66777776......55889999999999999999999*99999....566899999999999********************************* PP

                     HHHHHTT-HHHHH CS
  DNA_pol3_delta 154 Llelvennlsaik 166
                     L+e+++++++ + 
      EPX70792.1 210 LVEYSGGDMRKAI 222
                     ********99775 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   1.3e-05      0.01      14      49 ..      42      77 ..      34      97 .. 0.81
   2 ?    1.2   0.0      0.58   4.3e+02     138     160 ..     126     148 ..      92     159 .. 0.79
   3 ?    1.1   0.0      0.61   4.6e+02      65     158 ..     233     333 ..     204     335 .. 0.63

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 1.3e-05
      AAA_16 14 salervrsgrpelvllsGesGvGKsslvrellrale 49
                 + +++ s+  + +l++G +G+GK+s + +l+r+l 
  EPX70792.1 42 VLKKTLLSSNLPHMLFYGSPGTGKTSTILALARELF 77
                444567777789****************99999875 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.58
      AAA_16 138 vlvlDdlqwadeaslqllaaLlr 160
                 +++lD+++   ++ +++l+ +++
  EPX70792.1 126 IIILDEADSMTQDAQAALRRTME 148
                 89999999888888888877665 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.61
      AAA_16  65 saipy....sa.laqalareellrqlldeaesaeleawrekleealaavpelagaeasrllellkrllallsrderplvlvlDdlq....wadeaslql 154
                 +++p     ++ la a   ++++r lld a +++     +  +++++a +  +g + s+l+++l +   l+s+ ++++ l l +++    +  ++slql
  EPX70792.1 233 QGTPItvasIIeLAGAV-PSSIIRGLLDTAYTKNIVKIEA-MTREVEAEGYSTGIILSQLHDVLISEETLSSPAKHKIFLKLSEVDkrltDGADESLQL 329
                 45444444433356666.4466666666655544444443.4444445555666666999999999999999988889999999997666555568888 PP

      AAA_16 155 laaL 158
                 l++L
  EPX70792.1 330 LDLL 333
                 7766 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   1.2e-06   0.00092      11     106 ..      11     108 ..       3     113 .. 0.78
   2 ?   -2.0   0.0       2.1   1.6e+03      46      88 ..     230     272 ..     207     281 .. 0.70

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 1.2e-06
      DUF815  11 keegalepveevdevklddLvgidkqkealventeqfleglpannvLLwGarGtGKSslvkallneyaeeg...Lrlievekedlkelpklvellrerp 106
                 +e++  ++v+ v+  + ++L  + +q+++++   +++l+  +  ++L++G+ GtGK s++ al +e+   +    r++e++ +d + ++ + +++++ +
  EPX70792.1  11 TEQESKKSVPWVELYRPKSLDQVSSQEATVQVLKKTLLS-SNLPHMLFYGSPGTGKTSTILALARELFGPQlmkSRILELNASDERGISIIRDKVKTFA 108
                 445557888888999999999999988887666655555.55679*********************998884445899999999888888888887655 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 2.1
      DUF815  46 qfleglpannvLLwGarGtGKSslvkallneyaeegLrlieve 88 
                 ++ +g+p   + ++   G+  Ss+++ ll ++ ++++  ie  
  EPX70792.1 230 TLHQGTPITVASIIELAGAVPSSIIRGLLDTAYTKNIVKIEAM 272
                 5555666555566666777889999999998888876666654 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   9.8e-07   0.00073       5      73 ..      17      81 ..      12     114 .. 0.88

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 9.8e-07
       Rad17  5 enelWfekykPekaeelavhkkkieevkewlkadvLesrkkriLLisGPsGCgkstvvkvLskel.gikl 73
                +  +W+e y+P+ +++++     ++ +k+ l ++ L++      L  G +G gk+ ++  L++el g++l
  EPX70792.1 17 KSVPWVELYRPKSLDQVSSQEATVQVLKKTLLSSNLPHM-----LFYGSPGTGKTSTILALARELfGPQL 81
                4568********************************998.....99****************99735555 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   2.8e-06    0.0021       2      57 ..      26      76 ..      25      90 .. 0.84
   2 ?   -3.4   0.0       9.7   7.2e+03      87     111 ..     126     150 ..     124     152 .. 0.81

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 2.8e-06
      RuvB_N  2 rPksleeyigqekvkeklkifieaakkreealdhvllyGpPGlGkttlakiiakel 57
                rPksl++   qe+  + lk ++ +     ++l h+l+yG+PG Gkt+    +a+el
  EPX70792.1 26 RPKSLDQVSSQEATVQVLKKTLLS-----SNLPHMLFYGSPGTGKTSTILALAREL 76
                899999999999888877766654.....5799**************999999997 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 9.7
      RuvB_N  87 vlfideihrlsraveevlysamedf 111
                 ++ +de   +++ ++  l  +me +
  EPX70792.1 126 IIILDEADSMTQDAQAALRRTMEMY 150
                 6788999999999999888888866 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.1   0.00012      0.09       7     110 ..      54     141 ..      50     167 .. 0.65

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 0.00012
      AAA_22   7 ilvvtGesGtGKTtllrrlleqldeeakaee.erpevvfvtlpsstsskdllrellralglelkaerlsseellealeqalrarav..ielliiDEaqh 102
                 +++ +G +GtGKT ++  l+++l    +  + +++++++ +++ + + + ++ ++  + +               ++ + ++ +     +++i+DEa+ 
  EPX70792.1  54 HMLFYGSPGTGKTSTILALAREL----FGPQlMKSRILELNASDERGISIIRDKVKTFAKT--------------TVSNSVDGYPCppFKIIILDEADS 134
                 67899****************99....2333588888888888888777777777776663..............344444444444445555555555 PP

      AAA_22 103 lrseeale 110
                 + +++a  
  EPX70792.1 135 M-TQDAQA 141
                 5.333333 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.1   4.8e-06    0.0036      16      43 ..      49      84 ..      32     194 .. 0.73

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 4.8e-06
      AAA_11 16 ese..itliqGPPGtgKTktivellsqll......s 43
                +s+    l+ G PGtgKT+ti++l ++l       s
  EPX70792.1 49 SSNlpHMLFYGSPGTGKTSTILALARELFgpqlmkS 84
                33335689******************9965444440 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   4.7e-05     0.035      11      62 ..      53     104 ..      44     161 .. 0.71
   2 ?    0.4   0.0      0.99   7.4e+02      27      76 ..     187     235 ..     180     318 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 4.7e-05
      AAA_19  11 kvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAakelrerl 62 
                 +++l  + pGtGKT ++ +  ++l   + +k + + l a  +r  + +r+++
  EPX70792.1  53 PHMLFYGSPGTGKTSTILALARELFGPQLMKSRILELNASDERGISIIRDKV 104
                 689999*************999998888777666666677777777777777 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.99
      AAA_19  27 lkhivallvelggvkpeeillvaftgrAakelrerlaalgaeatTiHrla 76 
                 +k++++ +   ++v++e+ ++ a+ + +   +r+++ +++++a T+H+ +
  EPX70792.1 187 IKKRLEFIATDQNVQMETGVVDALVEYSGGDMRKAI-TFLQSAATLHQGT 235
                 566666666666677777777777777778899888.7888899999754 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.1     1e-05    0.0077      21      70 ..      39      90 ..      33     113 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1e-05
       AAA_7 21 rysyllelllknkk.pvllvGptGtGKtviikdllkkld.kekylsltinfs 70
                 +++l ++ll+++  ++l++G+ GtGKt++i  l ++l  ++ ++s +++++
  EPX70792.1 39 TVQVLKKTLLSSNLpHMLFYGSPGTGKTSTILALARELFgPQLMKSRILELN 90
                5666777777666526899*************98888763555555555555 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   1.2e-05    0.0092       5      89 ..      55     147 ..      52     169 .. 0.70

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1.2e-05
      AAA_24   5 iliyGpsgiGKTtlakel..........gpkplfidtekGlksldadkfpdieswedfldevvel...aaeladyktlviDtideleelclaevirqn 89 
                 +l yG++g+GKT++++ l          + ++l +  +++  +   +  +   ++++f ++ v++       +++k++++D +d + + + a ++r  
  EPX70792.1  55 MLFYGSPGTGKTSTILALarelfgpqlmKSRILEL--NASDERGISIIRD---KVKTFAKTTVSNsvdGYPCPPFKIIILDEADSMTQDAQAALRRTM 147
                 789***************77777666444444444..3333322222223...4556666666665445566789**********9999999887755 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   2.3e-05     0.017      12     113 ..      46     148 ..      35     156 .. 0.67
   2 ?   -2.2   0.0       3.7   2.8e+03     160     190 ..     204     234 ..     194     236 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 2.3e-05
      AAA_30  12 alltsgdrvavltGpAGtGKttalkal.reaweaa..ggrvi.glAptgkaAkvLaeelgieastiakllkrlk.grarlepgtllivDEagmvdtkql 105
                 +ll+s+   ++  G +GtGKt ++ al re++  +  + r++ + A+ ++    +++++     t ak + ++  +   + p +++i DEa  + ++  
  EPX70792.1  46 TLLSSNLPHMLFYGSPGTGKTSTILALaRELFGPQlmKSRILeLNASDERGISIIRDKVK----TFAKTTVSNSvDGYPCPPFKIIILDEADSMTQDAQ 140
                 4566666678899*******9776666499998874334444255666666666676655....4444444444433456677********99988777 PP

      AAA_30 106 aallkaae 113
                 aal + +e
  EPX70792.1 141 AALRRTME 148
                 77776665 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 3.7
      AAA_30 160 seeraaalalregdaeealealadrgriheg 190
                 +   +a  + + gd+++a+ +l++   +h+g
  EPX70792.1 204 TGVVDALVEYSGGDMRKAITFLQSAATLHQG 234
                 5566777888889999999999999888876 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   0.0   0.00019      0.14      22      59 ..      52      91 ..      29     112 .. 0.66
   2 ?    2.2   0.0      0.13     1e+02     109     139 ..     126     155 ..     124     175 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00019
  Mg_chelatase 22 gHnlllvGppGsGKtmlakrl..psllpplseeealevak 59
                    ++l++G+pG+GKt  + +l  +   p+l ++ +le ++
    EPX70792.1 52 LPHMLFYGSPGTGKTSTILALarELFGPQLMKSRILELNA 91
                  459***********85544441044457888888888765 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.13
  Mg_chelatase 109 vLfLDElpefkrkvlevLRePledgevtisr 139
                   +++LDE+  +++++  +LR+ +e    +i+r
    EPX70792.1 126 IIILDEADSMTQDAQAALRRTMEMY-AKITR 155
                   6899****************99964.35555 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00026      0.19       7     108 ..      58     143 ..      54     157 .. 0.65

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00026
     DUF2075   7 tGvaGtGKtvvllnllaeleddeeertavylsvNhplvl..vlrealakkeekkkkkeafeklssfinnlsefkkaeekkeepkedvvivDEAhrlltk 103
                  G +GtGKt   l+l+ el   ++ +++++ +   +++   ++r +++  +            +++ n+++         + p+++++i DEA  +++ 
  EPX70792.1  58 YGSPGTGKTSTILALARELFGPQLMKSRILELNASDERGisIIRDKVKTFA-----------KTTVSNSVD-------GYPCPPFKIIILDEADSMTQD 138
                 79*****************66666666666555555543115555553332...........344445555.......566899999999999999885 PP

     DUF2075 104 sdqae 108
                 +++a 
  EPX70792.1 139 AQAAL 143
                 55433 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   0.00011     0.082       1      89 [.      54     147 ..      54     149 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.00011
                 EEEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------.....G-SEEEEESGGG--HHHHHHHHHHH CS
       AAA_5   1 dvlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar.....egeilvlDEveraesevlnsLlsll 89 
                 ++l  G pGtgK++ +  la+ l  + +++     ++++d +g   i+++ + + +  + +++        +i++lDE + + ++++++L + +
  EPX70792.1  54 HMLFYGSPGTGKTSTILALARELFGPQLMKSRILELNASDERGISIIRDKVKTFAKTTVSNSVDgypcpPFKIIILDEADSMTQDAQAALRRTM 147
                 6899*******************7788888777788888888888888888899999999888899998999********99999999997655 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   0.00015      0.11       1      87 [.      54     148 ..      54     156 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00015
       AAA_3   1 hvllegvPGlaktllvkalakal.dlefkriqftpdllPsdilGtevfeekekefefk.........kGpvfanllladeinrappktqsalleame 87 
                 h+l+ g PG++kt ++ ala+ l + ++ +     +l  sd  G++++++k k+f  +         + p f ++++ de +  +  +q+al  +me
  EPX70792.1  54 HMLFYGSPGTGKTSTILALARELfGPQLMKS-RILELNASDERGISIIRDKVKTFAKTtvsnsvdgyPCPPF-KIIILDEADSMTQDAQAALRRTME 148
                 99******************98833333333.3357889999999999988866653311111111133445.567779999999999999998887 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   0.00013     0.098       3      25 ..      56      80 ..      54     152 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.00013
      AAA_28  3 vitGgestGKTtlleaLaar..gyp 25
                 + G ++tGKT+++ aLa++  g +
  EPX70792.1 56 LFYGSPGTGKTSTILALARElfGPQ 80
                689***************7656443 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   0.00013     0.096      21     156 ..      54     192 ..      44     321 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 0.00013
      AAA_23  21 ltlItGpNGaGKTTildAiklaLygetprlsrks..grgfe.ksdveiesegkvkayveltfenkdgrytrsiererelskkkgkttkkaklelleide 116
                   l++G  G+GKT+ + A+   L+g  p+l +++  + ++  ++ ++i  ++kvk++++ t++n  ++y  +  +++   ++  + t++a+  l ++ e
  EPX70792.1  54 HMLFYGSPGTGKTSTILALARELFG--PQLMKSRilELNASdERGISI-IRDKVKTFAKTTVSNSVDGY-PCPPFKIIILDEADSMTQDAQAALRRTME 148
                 5699*********************..455554423322221222223.33799999999999877776.55556666666666777777777777777 PP

      AAA_23 117 leqfise...llg..skkiilnlilflgqerfeefelkdkkerle 156
                    +i++   + +   + ii +l + + + rf++++ ++ k+rle
  EPX70792.1 149 MYAKITRfclI-CnyMTRIIDPLASRCSKYRFKPLDSENIKKRLE 192
                 77777765431.222233355777777777777777777777554 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00026      0.19       2      64 ..      56     138 ..      55     163 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00026
  RNA_helicase   2 wlyGpsgeGKStlakeLakallkkl..................klkkkdsvysrnpeddfwdgYtgq..evvvidDfgqvkde 64 
                   ++yG++g+GK++++  La++l +                        k +++++++ ++ +dgY  +  ++++ d+  +++++
    EPX70792.1  56 LFYGSPGTGKTSTILALARELFGPQlmksrilelnasdergisIIRDKVKTFAKTTVSNSVDGYPCPpfKIIILDEADSMTQD 138
                   79******************996554566677777777777653344445556777777777777441145566666666554 PP

>> Kinesin  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00018      0.14      32      95 ..       8      72 ..       3     233 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00018
                EEEECTTSCEEEEESEEEETTS-.HHHHHHHHHHHHHHHHHTTSEEEEEEEESTTSSHHHHHTBC CS
     Kinesin 32 kkenkeeeekkfkFdkvfdeeat.qeevyeetakplvesvleGynatifaYGqtgsGKTyTmegk 95
                +k++++e++k+  + +++ +++  q + +e t++ l +++l+     ++ YG  g+GKT T+   
  EPX70792.1  8 SKQTEQESKKSVPWVELYRPKSLdQVSSQEATVQVLKKTLLSSNLPHMLFYGSPGTGKTSTILAL 72
                5667777777888888888876636666666666666666666667899************9875 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00066      0.49       8      50 ..      36      78 ..      29      90 .. 0.79
   2 ?   -1.4   0.0       2.8   2.1e+03     133     147 ..     124     138 ..      84     159 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00066
                HHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S CS
      ResIII  8 QeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllk 50
                Qe  ++ l+++l s +  ++l+    GtGKT ++++l+++l+ 
  EPX70792.1 36 QEATVQVLKKTLLSSNLPHMLFYGSPGTGKTSTILALARELFG 78
                5555555555555588889*******************99985 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 2.8
                 -SEEEEETGGGTTS. CS
      ResIII 133 fdviiiDEaHrlgak 147
                 f++ii DEa  ++++
  EPX70792.1 124 FKIIILDEADSMTQD 138
                 568999998777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (340 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       513  (0.0286129); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        73  (0.00407162); expected 17.9 (0.001)
Passed Fwd filter:                        24  (0.00133861); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              24  [number of targets reported over threshold]
# CPU time: 0.63u 0.29s 00:00:00.92 Elapsed: 00:00:00.48
# Mc/sec: 2112.45
//
Query:       EPX70793.1  [L=403]
Description: PWWP domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-09   38.5   0.1    9.5e-09   35.6   0.0    2.3  2  PWWP      PWWP domain


Domain annotation for each model (and alignments):
>> PWWP  PWWP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.6   0.0   5.3e-13   9.5e-09       1      78 [.      71     147 ..      71     162 .. 0.82
   2 ?   -0.6   0.1     0.098   1.8e+03      37      77 ..     211     252 ..     192     277 .. 0.62

  Alignments for each domain:
  == domain 1  score: 35.6 bits;  conditional E-value: 5.3e-13
                 SSTTEEEEEEESSSEEEEEEEEECCCCCCCCHCT---SSSEEEEEETTTTEEEEE-GGGEEE-SHHHHHHHHHTTSS- CS
        PWWP   1 fqpgdlvwakvkgypwWPavvidpeevpekvlkkkekskelylVkFfgdkeyawvkekdlkpfteedeeeylkkkkkk 78 
                 +++g+ +++k++ ypwWP++++  e++p+++lk+ +k k+ + V+F+++++ya ++ +++  ++  ++ + l++++  
  EPX70793.1  71 YKIGKYILVKYSHYPWWPSRIVRREDIPSDILKRLPKYKG-LAVQFLPSRDYAIIPVSNVGCLDLYECLYVLESNRFT 147
                 6899*****************************9988887.*******9999***99998887777776666666654 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.098
                 -SSS...EEEEEETTTTEEEEE-GGGEEE-SHHHHHHHHHTTSS CS
        PWWP  37 kske...lylVkFfgdkeyawvkekdlkpfteedeeeylkkkkk 77 
                 k k+     + +F+ +k++   +++  + +++++++e+l++++k
  EPX70793.1 211 KAKTstrDSHGRFIRKKSQTIAPTH--TLLEKQEIKEELNEGEK 252
                 2222334566677776666666666..44555666666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (403 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1437  (0.0801495); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.29s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 2654.72
//
Query:       EPX70794.1  [L=1181]
Description: U2 snRNP-associated protein Sap155 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.2e-16   60.0   0.3      0.027   15.0   0.0    7.8  8  HEAT_EZ        HEAT-like repeat
    1.2e-13   51.2   6.9       0.03   14.7   0.0    8.1  8  HEAT_2         HEAT repeats
      2e-13   49.3   6.4        0.3   11.5   0.0    9.6  9  HEAT           HEAT repeat
    8.2e-11   42.4   4.2    3.2e-10   40.5   4.2    2.4  1  SF3b1          Splicing factor 3B subunit 1
    3.9e-08   33.4   5.8      0.013   15.4   0.1    5.6  5  DUF3385        Domain of unknown function (DUF3385)
    6.4e-07   29.6   8.0       0.69    9.9   0.0    6.3  6  Cnd1           non-SMC mitotic condensation complex subunit 1
    2.6e-06   27.3   0.7      0.059   13.0   0.0    4.7  5  NUC173         NUC173 domain
    6.4e-06   26.7   0.6        1.7    9.3   0.0    5.7  6  Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
    5.4e-05   22.5   2.8       0.15   11.1   0.0    4.9  5  Dopey_N        Dopey, N-terminal
    0.00015   20.5   0.3     0.0058   15.2   0.2    3.2  1  Adaptin_N      Adaptin N terminal region
    0.00062   19.7   0.2     0.0036   17.3   0.0    2.3  2  UNC45-central  Myosin-binding striated muscle assembly centra
     0.0077   16.1   2.5        5.3    7.0   0.0    5.3  6  UME            UME (NUC010) domain
  ------ inclusion threshold ------
      0.021   13.1   2.9       0.38    9.0   0.0    3.9  5  DRIM           Down-regulated in metastasis
      0.023   13.8   1.0        3.7    6.6   0.0    4.0  4  MMS19_C        RNAPII transcription regulator C-terminal
       0.11   11.6   0.1       0.29   10.3   0.1    1.6  1  CRM1_C         CRM1 C terminal
       0.19   11.8   0.5    2.3e+02    2.0   0.0    4.9  5  Arm            Armadillo/beta-catenin-like repeat


Domain annotation for each model (and alignments):
>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       3.4   3.8e+03      44      53 ..     501     510 ..     498     532 .. 0.64
   2 !   11.0   0.0   0.00042      0.47      22      55 .]     556     589 ..     535     589 .. 0.88
   3 ?   -2.5   0.0       7.4   8.3e+03      28      54 ..     725     751 ..     722     752 .. 0.85
   4 !   13.3   0.0   7.9e-05     0.088       9      55 .]     789     835 ..     781     835 .. 0.88
   5 !   15.0   0.0   2.5e-05     0.027      13      55 .]     873     919 ..     866     919 .. 0.87
   6 ?   -0.3   0.0       1.5   1.7e+03       3      14 ..     950     962 ..     947     982 .. 0.70
   7 !    8.1   0.0    0.0034       3.8      20      49 ..    1037    1066 ..    1020    1069 .. 0.86
   8 ?   -0.3   0.0       1.4   1.6e+03      29      46 ..    1123    1140 ..    1120    1141 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 3.4
     HEAT_EZ  44 VRaaAagaLg 53 
                 VR ++a+a++
  EPX70794.1 501 VRNTTARAFS 510
                 4555555554 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00042
     HEAT_EZ  22 lqplvpeilpaLlalLnddsdeVRaaAagaLgnl 55 
                 + p+++ ++ + + +L+d++++VR+ +a aL++l
  EPX70794.1 556 VLPHLKSLVECIGHGLEDEQQKVRTMTALALSAL 589
                 568999*************************986 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 7.4
     HEAT_EZ  28 eilpaLlalLnddsdeVRaaAagaLgn 54 
                 +i++  ++  +d+s + R+ +a + g+
  EPX70794.1 725 QIVDRIVNNFKDESEPYRKMTAETVGK 751
                 89999999999999999*999998876 PP

  == domain 4  score: 13.3 bits;  conditional E-value: 7.9e-05
     HEAT_EZ   9 waLGrlaggepellqplvpeilpaLlalLnddsdeVRaaAagaLgnl 55 
                 ++++++ +  +  ++p++p+i+   l +Ln++s++VR++Aa   +++
  EPX70794.1 789 NCFSTVVNSLGVRCKPYLPQIVSTILYRLNNKSANVREQAADLVSRI 835
                 47888888888999***************************988876 PP

  == domain 5  score: 15.0 bits;  conditional E-value: 2.5e-05
     HEAT_EZ  13 r....laggepellqplvpeilpaLlalLnddsdeVRaaAagaLgnl 55 
                 +    + ++++  +qp ++++lp L + L++ + +V+++++   g++
  EPX70794.1 873 SlkaiVSVVGMSSMQPPIKDLLPRLTPILRNRHEKVQENTIDLVGRI 919
                 4555678999******************************9988886 PP

  == domain 6  score: -0.3 bits;  conditional E-value: 1.5
     HEAT_EZ   3 vRraAawaLGr.l 14 
                 +RraA++++G   
  EPX70794.1 950 IRRAAINTFGYiS 962
                 7999999998743 PP

  == domain 7  score: 8.1 bits;  conditional E-value: 0.0034
     HEAT_EZ   20 ellqplvpeilpaLlalLnddsdeV.RaaAa 49  
                  e+ +++v +i p+L+++L+d  d+V R++Aa
  EPX70794.1 1037 EQARDYVYAITPLLANALMD-RDAVhRQTAA 1066
                  56778899***********6.9999999997 PP

  == domain 8  score: -0.3 bits;  conditional E-value: 1.4
     HEAT_EZ   29 ilpaLlalLnddsdeVRa 46  
                  +l++L+++L ++s +VR 
  EPX70794.1 1123 VLAYLMQGLFHPSRKVRN 1140
                  899*************96 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.1      0.96   1.1e+03      11      51 ..     383     432 ..     374     469 .. 0.63
   2 !    9.8   0.1   0.00094       1.1      11      81 ..     461     539 ..     452     544 .. 0.72
   3 !    6.8   0.1    0.0076       8.5      30      61 ..     561     592 ..     542     614 .. 0.78
   4 ?    2.1   0.0      0.24   2.6e+02      24      58 ..     717     752 ..     703     771 .. 0.83
   5 ?    3.4   0.0     0.092     1e+02      20      58 ..     794     835 ..     792     851 .. 0.78
   6 !    7.9   0.0    0.0035       3.9      12      61 ..     862     922 ..     853     931 .. 0.72
   7 !   14.7   0.0   2.7e-05      0.03       2      74 ..     895     981 ..     894     995 .. 0.82
   8 !    6.5   0.0    0.0095        11      31      86 ..    1004    1068 ..     990    1070 .. 0.78

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.96
      HEAT_2  11 dpdpevrraairaLgrignp........ealpaLve.llededpavRraa 51 
                    p  r+ a+r+L +++ +        ++lp+L e  led++++    +
  EPX70794.1 383 NGTPPMRKSALRQLTDQARDfgaaalfnQILPLLMErTLEDQERHLLVKV 432
                 55677888888888865555555556666677777734476666655555 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00094
      HEAT_2  11 dpdpevrraairaLgrignpea....lpaLvellededpavRraaaeaLg....aigdpealpaLkellddddddvvRe 81 
                 d+d++ r++  + + +++  +     ++++++ +++ d++vR + a+a +    a+g p+ lp+Lk+ +++++++  R 
  EPX70794.1 461 DEDYYARAEGREIISNLAKASGlahmIATMRPDIDHVDEYVRNTTARAFSvvasALGVPALLPFLKAVCRSKKSWQARH 539
                 77777776555555555555551111556666667779*********99655559999*************99998875 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.0076
      HEAT_2  30 pealpaLvellededpavRraaaeaLgaigdp 61 
                 +++++++   lede   vR + a aL+a+++ 
  EPX70794.1 561 KSLVECIGHGLEDEQQKVRTMTALALSALAEA 592
                 4679999999*****************99764 PP

  == domain 4  score: 2.1 bits;  conditional E-value: 0.24
      HEAT_2  24 Lg.rignpealpaLvellededpavRraaaeaLgai 58 
                 L+ + g  ++++ +v+  +de++  R++ ae+ g++
  EPX70794.1 717 LAgQVGVLQIVDRIVNNFKDESEPYRKMTAETVGKV 752
                 5547888899***********************986 PP

  == domain 5  score: 3.4 bits;  conditional E-value: 0.092
      HEAT_2  20 airaLg.rign..pealpaLvellededpavRraaaeaLgai 58 
                 ++ +Lg r+++  p+++ +++  l++++++vR++aa+  ++i
  EPX70794.1 794 VVNSLGvRCKPylPQIVSTILYRLNNKSANVREQAADLVSRI 835
                 5667776555444699999999999**********9988776 PP

  == domain 6  score: 7.9 bits;  conditional E-value: 0.0035
      HEAT_2  12 pdpevrraairaLg.........rignp..ealpaLvellededpavRraaaeaLgaigdp 61 
                 + pev   ++ +L          ++++p  ++lp L+++l++ ++ v+++ ++  g+i+d 
  EPX70794.1 862 EYPEVLGSILGSLKaivsvvgmsSMQPPikDLLPRLTPILRNRHEKVQENTIDLVGRIADR 922
                 55555555555555555555466566656699*************************9874 PP

  == domain 7  score: 14.7 bits;  conditional E-value: 2.7e-05
      HEAT_2   2 daLlqalendpdpevrraairaLgrignp...........ealpaLvellededpavRraaaeaLg....aigdpealpaLkellddd 74 
                 + L  +l +  +++v+ ++i+  gri+++           ++   L+++l+ +   +Rraa+++ g    aig +++l+ L+  l+  
  EPX70794.1 895 PRLTPIL-RNRHEKVQENTIDLVGRIADRgsefvsarewmRICFELIDMLKAHRKSIRRAAINTFGyiskAIGPQDVLATLLNNLKVQ 981
                 6788999.8999************999998889988855566666777779999***********977777799*9**9999988654 PP

  == domain 8  score: 6.5 bits;  conditional E-value: 0.0095
      HEAT_2   31 ealpaLvellededpavRraaaeaLgai....gdpe.....alpaLkellddddddvvReaAaea 86  
                  +++paL    ++++++v+  + ++L+ +    g+++     a+  L++ ++ d+d+v R+ Aa+ 
  EPX70794.1 1004 TVIPALMADYRTPEMNVQNGVLKSLAFMfeyiGEQArdyvyAITPLLANALMDRDAVHRQTAASV 1068
                  567888888899999**********9665555665556777999999999999****99999875 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0       1.5   1.7e+03      13      29 ..     498     514 ..     494     516 .. 0.82
   2 ?    0.1   0.0       1.2   1.3e+03       1      28 [.     521     549 ..     521     551 .. 0.86
   3 !   11.5   0.0   0.00026       0.3       3      29 ..     565     591 ..     563     593 .. 0.87
   4 ?    4.7   0.0      0.04        45       1      27 [.     726     752 ..     726     755 .. 0.91
   5 !    7.0   0.0    0.0071         8       2      27 ..     810     835 ..     809     838 .. 0.86
   6 ?    2.3   0.0      0.24   2.7e+02       1      29 [.     893     921 ..     893     922 .. 0.94
   7 ?    5.7   0.0     0.019        21       5      29 ..     939     963 ..     938     965 .. 0.90
   8 !    8.8   0.1     0.002       2.2       2      30 ..    1047    1075 ..    1046    1076 .. 0.88
   9 ?   -1.7   0.0       4.6   5.2e+03       2      17 ..    1124    1139 ..    1123    1141 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 1.5
                 SHHHHHHHHHHHHHHHH CS
        HEAT  13 speVReaAakaLgalae 29 
                 +  VR ++a+a+  +a+
  EPX70794.1 498 DEYVRNTTARAFSVVAS 514
                 678*********99887 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 1.2
                 HHHHHHHHHT-.SSHHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsD.pspeVReaAakaLgala 28 
                 llP+l   +++ +s++ R + ++ + ++a
  EPX70794.1 521 LLPFLKAVCRSkKSWQARHTGVRIIQQIA 549
                 79999998966699999**9999999987 PP

  == domain 3  score: 11.5 bits;  conditional E-value: 0.00026
                 HHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   3 PlllkllsDpspeVReaAakaLgalae 29 
                  ++ + l+D+  +VR ++a+aL alae
  EPX70794.1 565 ECIGHGLEDEQQKVRTMTALALSALAE 591
                 5666789******************98 PP

  == domain 4  score: 4.7 bits;  conditional E-value: 0.04
                 HHHHHHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgal 27 
                 +++ ++++ +D+s   R+++a+++g++
  EPX70794.1 726 IVDRIVNNFKDESEPYRKMTAETVGKV 752
                 678899*****************9975 PP

  == domain 5  score: 7.0 bits;  conditional E-value: 0.0071
                 HHHHHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgal 27 
                 + ++l  l+ +s++VRe Aa  + ++
  EPX70794.1 810 VSTILYRLNNKSANVREQAADLVSRI 835
                 66788889************999887 PP

  == domain 6  score: 2.3 bits;  conditional E-value: 0.24
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalae 29 
                 llP l   l+  + +V e+++  +g++a 
  EPX70794.1 893 LLPRLTPILRNRHEKVQENTIDLVGRIAD 921
                 7999**********************985 PP

  == domain 7  score: 5.7 bits;  conditional E-value: 0.019
                 HHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAakaLgalae 29 
                 l+ +l+    ++R+aA++++g +++
  EPX70794.1 939 LIDMLKAHRKSIRRAAINTFGYISK 963
                 68899999*************9987 PP

  == domain 8  score: 8.8 bits;  conditional E-value: 0.002
                  HHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT    2 lPlllkllsDpspeVReaAakaLgalaev 30  
                   Pll ++l+D ++  R++Aa  + +l+ +
  EPX70794.1 1047 TPLLANALMDRDAVHRQTAASVVKHLSLG 1075
                  599*****************999988765 PP

  == domain 9  score: -1.7 bits;  conditional E-value: 4.6
                  HHHHHHHHT-SSHHHH CS
        HEAT    2 lPlllkllsDpspeVR 17  
                  l  l++ l +ps +VR
  EPX70794.1 1124 LAYLMQGLFHPSRKVR 1139
                  5679999********9 PP

>> SF3b1  Splicing factor 3B subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.5   4.2   2.9e-13   3.2e-10       2     115 ..     209     318 ..     208     321 .. 0.69

  Alignments for each domain:
  == domain 1  score: 40.5 bits;  conditional E-value: 2.9e-13
       SF3b1   2 sakkkrSrWdetpatp.e.atpkgetpvgamgmatPpgala.amtPeqlqalrlekeidernrpltDeeLdallPkeGYkilepPagYepirtparkll 97 
                 ++k krSrWd+ p +  e ++p  +   +++  a P +  + +   ++l++++ e+++  + r +tDeeL++llP+eGY +lepPagY    +p+   +
  EPX70794.1 209 TPKPKRSRWDQGPPKVgEtMAPARRSRWDKAPEASPISDYVaENGIKKLESISHEQQVPIQ-RRITDEELNSLLPSEGYVVLEPPAGYIESIHPE---V 303
                 6688*******99955232344444444556667885544425555889999999998775.669***********************8777776...3 PP

       SF3b1  98 atptplagtaegfaiqee 115
                 ++  p++ t   ++i+ee
  EPX70794.1 304 NEKEPIVDT---YHIPEE 318
                 344444443...556655 PP

>> DUF3385  Domain of unknown function (DUF3385)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0      0.17   1.9e+02      70     130 ..     391     452 ..     365     460 .. 0.84
   2 ?    1.7   0.1      0.19   2.1e+02      22     135 ..     532     569 ..     511     714 .. 0.58
   3 !   15.4   0.1   1.2e-05     0.013      85     155 ..     767     834 ..     717     840 .. 0.72
   4 ?   -2.1   0.0       2.8   3.1e+03     114     150 ..     877     913 ..     862     919 .. 0.60
   5 !   11.0   0.1   0.00026      0.29      15     146 ..     939    1063 ..     932    1073 .. 0.77

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.17
     DUF3385  70 llmvglspsneeyyptvvinaLlrilkdpsls.shhaavveaimnifktlglkcvpfLdqii 130
                 +++ +l+ +  ++ ++  +n++l +l +++l+ + ++  v++i  i+ +l+  + pf ++i+
  EPX70794.1 391 SALRQLTDQARDFGAAALFNQILPLLMERTLEdQERHLLVKVIDRILYKLDELVRPFTHKIL 452
                 44577788889999999**************9777888999999***999999999999886 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.19
     DUF3385  22 eqsqsirrevikllGilGALDPykhkqveeraedkkrreeaaretdlsllmvglspsneeyyptvvinaLlrilkdpslsshhaavveaimnifktlgl 120
                 ++s++ r   +++                                                                            i +i   +g+
  EPX70794.1 532 KKSWQARHTGVRI----------------------------------------------------------------------------IQQIALLMGC 554
                 4444444444443............................................................................3333333333 PP

     DUF3385 121 kcvpfLdqiipalls 135
                 +++p L+ ++  + +
  EPX70794.1 555 SVLPHLKSLVECIGH 569
                 333333333333333 PP

  == domain 3  score: 15.4 bits;  conditional E-value: 1.2e-05
     DUF3385  85 tvvinaLlrilkdpslsshhaavveaimnifktlglkcvpfLdqiipallsvirtteesnlrefllqqLat 155
                    +  +l  ++++s++   + +++   +++++lg++c p+L+qi++++l  +++ ++ n+re   + ++ 
  EPX70794.1 767 ELLLDGVLFAFQEQSVE--ENVILNCFSTVVNSLGVRCKPYLPQIVSTILYRLNNKSA-NVREQAADLVSR 834
                 55555555555666655..4556677789999**********************9887.888877665555 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 2.8
     DUF3385 114 ifktlglkc.vpfLdqiipallsvirtteesnlrefll 150
                 i++ +g+++  p ++ ++p+l  ++r+ +e +++e  +
  EPX70794.1 877 IVSVVGMSSmQPPIKDLLPRLTPILRNRHE-KVQENTI 913
                 444445555455666666666666666665.5555544 PP

  == domain 5  score: 11.0 bits;  conditional E-value: 0.00026
     DUF3385   15 LlnilkteqsqsirrevikllGilG.ALDPykhkqveeraedkkrreeaaretdlsllmvglspsneeyyptvvinaLlrilkdpslsshhaavvea 110 
                  L+++lk+  ++sirr +i ++G +  A+ P  +       ++ k  +++ ++     ++v +    e   p +vi aL++  + p ++  +++v+++
  EPX70794.1  939 LIDMLKAH-RKSIRRAAINTFGYISkAIGPQDVLATLL--NNLK--VQERQNR--VCTTVAIAIVAETCMPFTVIPALMADYRTPEMN-VQNGVLKS 1027
                  56677755.89999999999999966999999843332..2212..2222222..22245556677999*****************76.899***** PP

     DUF3385  111 imnifktlglkcvpfLdqiipallsvirtteesnlr 146 
                  + ++f+ +g +   ++  i p l +++ + ++ +++
  EPX70794.1 1028 LAFMFEYIGEQARDYVYAITPLLANALMDRDAVHRQ 1063
                  ***********************9999877765554 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       1.8     2e+03     115     146 ..     408     437 ..     362     444 .. 0.80
   2 ?   -2.0   0.0       2.8   3.2e+03      23      45 ..     487     509 ..     483     516 .. 0.75
   3 !    9.9   0.0   0.00062      0.69      20      97 ..     561     601 ..     538     702 .. 0.48
   4 ?    5.1   0.1     0.019        21      79     161 ..     774     855 ..     723     856 .. 0.74
   5 !    6.2   0.0    0.0086       9.6      15     115 ..     886     992 ..     875    1013 .. 0.74
   6 !    6.3   0.0    0.0079       8.8      19      49 ..    1043    1074 ..    1038    1107 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 1.8
        Cnd1 115 gqitilefLlsyipkdkqeaeslveklcprlq 146
                  +++il +L++ + +d++   +l+ k+++r+ 
  EPX70794.1 408 LFNQILPLLMERTLEDQE--RHLLVKVIDRIL 437
                 478899999999999999..999999999875 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 2.8
        Cnd1  23 vepLrkrLkDedpyVRktaaivv 45 
                 +  +r  +   d+yVR+t+a ++
  EPX70794.1 487 IATMRPDIDHVDEYVRNTTARAF 509
                 5566666777899*****99765 PP

  == domain 3  score: 9.9 bits;  conditional E-value: 0.00062
        Cnd1  20 eylvepLrkrLkDedpyVRktaaivvakLilndmvkekgflselaklleDenprVvanalaalteiseksenaiynll 97 
                   lve + ++L+De++ VR  +a++++ L ++ +                                        ++ +
  EPX70794.1 561 KSLVECIGHGLEDEQQKVRTMTALALSALAEAAT-------------------------------------PYGIEAF 601
                 5667777777777777777777777777744433.....................................2222222 PP

  == domain 4  score: 5.1 bits;  conditional E-value: 0.019
        Cnd1  79 laalteiseksenaiynllpdiisklsdalnecsewgqitilefLlsyipkdkqeaeslveklcprlqhansavvlaaikviL 161
                 l+a++e s ++ n i+n +++++++l  + +    +   til  L +  ++ +++a +lv +++  ++++ ++  ++++ v+L
  EPX70794.1 774 LFAFQEQSVEE-NVILNCFSTVVNSLGVRCKPYLPQIVSTILYRLNNKSANVREQAADLVSRITVVMRACGEEALMRKLGVVL 855
                 66777777776.78888888888888776666666666666666666666666777778888877777777777777777766 PP

  == domain 5  score: 6.2 bits;  conditional E-value: 0.0086
        Cnd1  15 vpnlveylvepLrkrLkDedpyVRktaaivvakLilnd..mvkekg...flselaklleDenprVvanalaalteisek.senaiynllpdiisklsda 107
                 ++  +  l+++L+  L+ +++ V+++++ +v ++ +++  +v  ++   + +el ++l+ + ++++  a++ +  is+  +++ ++  l + ++    +
  EPX70794.1 886 MQPPIKDLLPRLTPILRNRHEKVQENTIDLVGRIADRGseFVSAREwmrICFELIDMLKAHRKSIRRAAINTFGYISKAiGPQDVLATLLNNLKVQERQ 984
                 555577889999999999999999999999999955543366554444499***************************987777776666666555545 PP

        Cnd1 108 lnecsewg 115
                    c+  +
  EPX70794.1 985 NRVCTTVA 992
                 44565555 PP

  == domain 6  score: 6.3 bits;  conditional E-value: 0.0079
        Cnd1   19 veylvepLrkrLkDedpyVRktaaivvakL.i 49  
                  v ++++ L ++L D+d+  R+taa vv +L +
  EPX70794.1 1043 VYAITPLLANALMDRDAVHRQTAASVVKHLsL 1074
                  66788899*********************943 PP

>> NUC173  NUC173 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       1.7   1.9e+03      16      55 ..     496     536 ..     483     608 .. 0.63
   2 ?    0.9   0.0      0.27     3e+02      40      76 ..     723     759 ..     696     761 .. 0.78
   3 !   13.0   0.0   5.3e-05     0.059      20      82 ..     786     851 ..     771     863 .. 0.81
   4 !    6.6   0.0    0.0048       5.4      13      89 ..     904     981 ..     892     989 .. 0.69
   5 ?   -1.7   0.0       1.7   1.9e+03      18      51 ..    1021    1054 ..    1014    1077 .. 0.64

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 1.7
      NUC173  16 aawkevlevlsalfeklgkrs.spllkkilktlgelresee 55 
                 ++ ++v ++++++f+++ ++   p+l + lk ++  ++s +
  EPX70794.1 496 HVDEYVRNTTARAFSVVASALgVPALLPFLKAVCRSKKSWQ 536
                 55555666666666666666555566666666665555443 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.27
      NUC173  40 lkkilktlgelreseefelkkeadevigaairamGpe 76 
                 + +i+ ++ +  ++e+ +++k   e++g+ i ++G  
  EPX70794.1 723 VLQIVDRIVNNFKDESEPYRKMTAETVGKVIGSLGVS 759
                 567777777777777779*************999976 PP

  == domain 3  score: 13.0 bits;  conditional E-value: 5.3e-05
      NUC173  20 evlevlsalfeklgkrsspllkkilktlgelreseefelkkeadev...igaairamGpevvLevl 82 
                  +l+++s++++ lg r++p+l +i+ t+    ++++++ +++a +    i   +ra+G e++++ l
  EPX70794.1 786 VILNCFSTVVNSLGVRCKPYLPQIVSTILYRLNNKSANVREQAADLvsrITVVMRACGEEALMRKL 851
                 489************************9998888877666665554122667899****9998766 PP

  == domain 4  score: 6.6 bits;  conditional E-value: 0.0048
      NUC173  13 kyqaawkevlevlsalfeklgkrs.spllkkilktlgelreseefelkkeadevigaairamGpevvLevlPLnleee 89 
                 +++++ ++++ ++ ++ ++  + + +   ++i  +l ++ ++++++ +++a +++g + +a+Gp+ vL++l  nl+ +
  EPX70794.1 904 RHEKVQENTIDLVGRIADRGSEFVsAREWMRICFELIDMLKAHRKSIRRAAINTFGYISKAIGPQDVLATLLNNLKVQ 981
                 55555555566666555555444433335555556666666776689***********************98888754 PP

  == domain 5  score: -1.7 bits;  conditional E-value: 1.7
      NUC173   18 wkevlevlsalfeklgkrsspllkkilktlgelr 51  
                   + vl+ l+ +fe +g++++ ++  i   l++  
  EPX70794.1 1021 QNGVLKSLAFMFEYIGEQARDYVYAITPLLANAL 1054
                  6779999999999999999555444433333333 PP

>> Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       2.2   2.5e+03      17      59 ..     440     482 ..     432     491 .. 0.84
   2 !    9.3   0.0    0.0015       1.7       2      74 ..     537     609 ..     536     616 .. 0.91
   3 ?   -0.0   0.0       1.2   1.4e+03      21      43 ..     639     661 ..     621     672 .. 0.84
   4 ?   -0.7   0.0         2   2.2e+03      27      50 ..     725     748 ..     720     758 .. 0.85
   5 ?    5.1   0.1     0.031        34      12      58 ..     793     839 ..     784     856 .. 0.82
   6 ?    2.8   0.0      0.16   1.7e+02       2      48 ..    1020    1066 ..    1019    1111 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 2.2
  Vac14_Fab1_bd  17 lekkikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvak 59 
                    l++ +++++++i+ ++   + D+d   R    E + n+ak++ 
     EPX70794.1 440 LDELVRPFTHKILVVIEPLLIDEDYYARAEGREIISNLAKASG 482
                    6666889999999999999*****9999999999999999865 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.0015
  Vac14_Fab1_bd   2 arkggligLaavaialekkikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalv 74 
                    ar+ g+  +  +a+ ++ ++ ++l+++v+ + + ++D++++vR  ++ +l  +a +a    ++ + +i++ l+
     EPX70794.1 537 ARHTGVRIIQQIALLMGCSVLPHLKSLVECIGHGLEDEQQKVRTMTALALSALAEAATPYGIEAFDSILKPLW 609
                    688899999999999999************************************9999999999999988776 PP

  == domain 3  score: -0.0 bits;  conditional E-value: 1.2
  Vac14_Fab1_bd  21 ikeyleeivkpvlkcfsDkdsrv 43 
                    +++++++i+k+vl+ fs  d+++
     EPX70794.1 639 ASHFTKRIMKIVLREFSSPDEEM 661
                    778999**********9998875 PP

  == domain 4  score: -0.7 bits;  conditional E-value: 2
  Vac14_Fab1_bd  27 eivkpvlkcfsDkdsrvRyyacEs 50 
                    +iv+ +++ f+D+++  R  ++E+
     EPX70794.1 725 QIVDRIVNNFKDESEPYRKMTAET 748
                    799**********99999887776 PP

  == domain 5  score: 5.1 bits;  conditional E-value: 0.031
  Vac14_Fab1_bd  12 avaialekkikeyleeivkpvlkcfsDkdsrvRyyacEslyniakva 58 
                    +v  +l+ + k+yl +iv+++l  ++ k++ vR  a++ +  i+ v+
     EPX70794.1 793 TVVNSLGVRCKPYLPQIVSTILYRLNNKSANVREQAADLVSRITVVM 839
                    5556788999***********************99988776665554 PP

  == domain 6  score: 2.8 bits;  conditional E-value: 0.16
  Vac14_Fab1_bd    2 arkggligLaavaialekkikeyleeivkpvlkcfsDkdsrvRyyac 48  
                      ++g l +La++   +++++++y+  i + + +++ D+d+  R +a+
     EPX70794.1 1020 VQNGVLKSLAFMFEYIGEQARDYVYAITPLLANALMDRDAVHRQTAA 1066
                     5789999********************************98887775 PP

>> Dopey_N  Dopey, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.1      0.11   1.2e+02     113     169 ..     426     482 ..     412     490 .. 0.84
   2 !   11.1   0.0   0.00014      0.15     107     180 ..     532     611 ..     514     676 .. 0.81
   3 ?    3.6   0.0     0.026        29     115     169 ..     786     840 ..     747     859 .. 0.84
   4 ?    1.0   0.0      0.16   1.8e+02     124     190 ..     878     949 ..     866    1034 .. 0.76
   5 ?   -1.1   0.0      0.72   8.1e+02      94     179 ..    1039    1133 ..    1017    1148 .. 0.76

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.11
     Dopey_N 113 kpqlleliekyllpLgekLrpalkglilslLpGLeeensevfertlklleklkekvg 169
                 +  l+++i++ l +L+e +rp+++ +++ + p L +e+     +  +++ +l ++ g
  EPX70794.1 426 RHLLVKVIDRILYKLDELVRPFTHKILVVIEPLLIDEDYYARAEGREIISNLAKASG 482
                 77899**************************99999988888888888888877666 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.00014
     Dopey_N 107 yaslsvkpqlleliekyllpLgekLrpalkglilslLpGLeeensevfertlklleklkekvge......kyfyqclwla 180
                 + s + + + +++i++  l +g ++ p lk+l+ ++  GLe+e++ v   t   l  l e+  +      +   + lw  
  EPX70794.1 532 KKSWQARHTGVRIIQQIALLMGCSVLPHLKSLVECIGHGLEDEQQKVRTMTALALSALAEAATPygieafDSILKPLWSG 611
                 45789999999****************************************99999999988877776664455555554 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.026
     Dopey_N 115 qlleliekyllpLgekLrpalkglilslLpGLeeensevfertlklleklkekvg 169
                  +l+ + + + +Lg + +p l+ +++ +L  L++++ +v e++ +l+ ++   ++
  EPX70794.1 786 VILNCFSTVVNSLGVRCKPYLPQIVSTILYRLNNKSANVREQAADLVSRITVVMR 840
                 47899999999*******************************9999999876654 PP

  == domain 4  score: 1.0 bits;  conditional E-value: 0.16
     Dopey_N 124 llpLg.ekLrpalkglilslLpGLeeensevfertlklleklkekvge....kyfyqclwlaiirspsrRlg 190
                 +  +g ++++p +k l+  l p L + ++ v+e+t++l+ ++ ++ +e    +  ++ ++ +i   + +R +
  EPX70794.1 878 VSVVGmSSMQPPIKDLLPRLTPILRNRHEKVQENTIDLVGRIADRGSEfvsaREWMRICFELIDMLKAHRKS 949
                 446677889999999999999***999999999999999999887666666655555555555544444444 PP

  == domain 5  score: -1.1 bits;  conditional E-value: 0.72
     Dopey_N   94 lslylpGLlpllsyasls...v.kpqlleliekyll.pLgekLrpalkglilslLpGLeeensevfertlklleklkekvge....kyfyqclwl 179 
                   + y+++++pll++a ++   v + +  +++++  l  +g  ++ a+  l+  l p + ee+  v + + + ++ ++++vg     +y++q l+ 
  EPX70794.1 1039 ARDYVYAITPLLANALMDrdaVhRQTAASVVKHLSLgCVGLGVEDAMIHLLNLLWPNILEESPHVINAVREGIDGIRNCVGVgvvlAYLMQGLFH 1133
                  45588888888888887533341444445555555577778889999999999999999999999999999999999999998888888887775 PP

>> Adaptin_N  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.2   5.2e-06    0.0058      81     331 ..     487     999 ..     473    1005 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 5.2e-06
                 CHHHHHHCCSSSHHHHHHHHHHHCCC--CCCHHHHHHHHHHHHT-SSH.HHHHHHHHHHHHCCCC.....CHHCCCCCHHHHHHHCTT-SSHHHHHHHH CS
   Adaptin_N  81 tnslqkDlkdpnqlirglALrvLssirvpelaedlapaikkllkdrsp.yvrkkAalailklykk.....dpdllrkqlveeikellsdkdpgvvlaAv 173
                 + +++ D  + ++++r+ + r+ s + ++  +++l+p +k++ +++++ + r + + +i ++  +      p+l  k lve+i + l+d++++v + + 
  EPX70794.1 487 IATMRPDIDHVDEYVRNTTARAFSVVASALGVPALLPFLKAVCRSKKSwQARHTGVRIIQQIALLmgcsvLPHL--KSLVECIGHGLEDEQQKVRTMTA 583
                 678899999********************99*************999998888888888887776644434444..337999*****999998888877 PP

                 HHHHHHHCCCCCCCHHHHHHHCCHHHHH.................................................HCS-HHHHHHHHHHHCC---SS CS
   Adaptin_N 174 alleeikkndrlllkllpklvrrLcnll.................................................teldpwlqvkiiklltrlarqe 223
                  +l  +         + p+ ++ ++ +l                                                 +++d+ ++ +++k+++++a ++
  EPX70794.1 584 LALSALAEA------ATPYGIEAFDSILkplwsgvqrhrgkslaaflkatgfiiplmepeyashftkrimkivlrefSSPDEEMKKIVLKVVSQCASTD 676
                 777777222......233333333333333344447777888888888888888888888888888888888899999999999999999999999999 PP

                 HHHH............................................................................................... CS
   Adaptin_N 224 peer............................................................................................... 227
                   ++                                                                                               
  EPX70794.1 677 GVSSeylktevlpeffhcfwsrrmasdrrsykqvvettfvlagqvgvlqivdrivnnfkdesepyrkmtaetvgkvigslgvseiderteellldgvlf 775
                 99999********************************************************************************************** PP

                 ................................................................................................... CS
   Adaptin_N 228 ................................................................................................... 227
                                                                                                                    
  EPX70794.1 776 afqeqsveenvilncfstvvnslgvrckpylpqivstilyrlnnksanvreqaadlvsritvvmracgeealmrklgvvlyeylgeeypevlgsilgsl 874
                 **************************************************************************************************9 PP

                 ................HHHHHHHCGGCGCSSCHHHHHHHHHCCHCCCCST......HHHCCHHCHHHHHHSSCCTCHHHHHCHHHHHHHHX.XTTTTTT CS
   Adaptin_N 228 ..........sk....kellesllnllqssnnaVlletvnlivelapkne......livlavnaLvrllsskdenlryvaLrtllkivkke.pkavqhl 305
                           s     k+ll++l++ l+++++ V  +t+ l+ ++a++ +        ++++  L+++l+ +++++r +a++t+  i+k   p+ v   
  EPX70794.1 875 kaivsvvgmsSMqppiKDLLPRLTPILRNRHEKVQENTIDLVGRIADRGSefvsarEWMRICFELIDMLKAHRKSIRRAAINTFGYISKAIgPQDVLAT 973
                 999988887611566789*************************9999888888888789****************************998778888888 PP

                 TCCCCSXXTTSXHHHHHHHHHHHCCC CS
   Adaptin_N 306 dlkifllktdddvsirlkaldlllkl 331
                  l+   ++  +++   + a+ ++ ++
  EPX70794.1 974 LLNNLKVQERQNRVCTTVAIAIVAET 999
                 88888888788888778888777665 PP

>> UNC45-central  Myosin-binding striated muscle assembly central
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   3.2e-06    0.0036       4     113 ..     561     674 ..     546     686 .. 0.89
   2 ?   -2.2   0.0       3.1   3.5e+03       2      29 ..     809     835 ..     764     853 .. 0.65

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 3.2e-06
                    HHHHHHC-T...---TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH...SCCTHHHHHHHHHHHHHHHHSSHHHHHHHHTSTTHHHHHHHHHH CS
  UNC45-central   4 dlllkfldm...rqpesvrslallilsklldaakeefeeaiseflesll...ekgdeddllnalsvltalFpvvpdvasalflsegflesllelve 93 
                    + l++++++   +++++vr++  l+ls+l +aa+  ++ea++ +l+ l    +++++++l ++l++   + p++    ++ f++ ++++++l   +
     EPX70794.1 561 KSLVECIGHgleDEQQKVRTMTALALSALAEAATPYGIEAFDSILKPLWsgvQRHRGKSLAAFLKATGFIIPLMEPEYASHFTK-RIMKIVLREFS 655
                    444455555777899*******************************999999**********************9999999998.9********** PP

                    S.S-HHHHHHHHHHHHTT-- CS
  UNC45-central  94 skkskkvqlaalellsaAci 113
                    s  ++++++ +l+++s+ ++
     EPX70794.1 656 S-PDEEMKKIVLKVVSQCAS 674
                    9.************998665 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 3.1
                    HHHHHHHHC-T---TTHHHHHHHHHHHH CS
  UNC45-central   2 hldlllkfldmrqpesvrslallilskl 29 
                    +++++l  l+ +++++vr +a  ++s++
     EPX70794.1 809 IVSTILYRLN-NKSANVREQAADLVSRI 835
                    2333333443.46666666665555555 PP

>> UME  UME (NUC010) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0       1.4   1.5e+03      54      94 ..     477     528 ..     409     535 .. 0.60
   2 ?   -0.5   0.1       1.1   1.2e+03      21      75 ..     530     589 ..     518     616 .. 0.74
   3 ?    2.3   0.0      0.14   1.5e+02      28      64 ..     783     819 ..     773     855 .. 0.77
   4 ?   -2.4   0.0         4   4.5e+03      31      64 ..     869     907 ..     846     914 .. 0.71
   5 ?   -0.1   0.0      0.77   8.6e+02      74      97 ..     970     993 ..     930     997 .. 0.85
   6 !    7.0   0.0    0.0047       5.3      25      65 ..    1017    1058 ..    1003    1073 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 1.4
         UME  54 i.........macLqsalei..delrsaalsvWatllsnlededleplleqt 94 
                 +         +a+++  +++  + +r+ + +++++ +s l + +l p+l+++
  EPX70794.1 477 LakasglahmIATMRPDIDHvdEYVRNTTARAFSVVASALGVPALLPFLKAV 528
                 0333333333777777777776678888888888888888888888887765 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 1.1
         UME  21 hgkkslaekkraikaleeliklagssissalpqimacLqsaleid.....elrsaalsvW 75 
                 ++kks + +   ++ ++++  l+g s+ + l  ++ c  ++le++      ++  als+ 
  EPX70794.1 530 RSKKSWQARHTGVRIIQQIALLMGCSVLPHLKSLVECIGHGLEDEqqkvrTMTALALSAL 589
                 466788899999999999999999999999999999999999996333334444444444 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.14
         UME  28 ekkraikaleeliklagssissalpqimacLqsalei 64 
                 e   ++++ + +++ +g + +++lpqi+++    l++
  EPX70794.1 783 EENVILNCFSTVVNSLGVRCKPYLPQIVSTILYRLNN 819
                 5666788888888888888888888888887777766 PP

  == domain 4  score: -2.4 bits;  conditional E-value: 4
         UME  31 raikaleeliklagss.....issalpqimacLqsalei 64 
                  ++ +l+++++++g s     i+  lp+++ +L++  e+
  EPX70794.1 869 SILGSLKAIVSVVGMSsmqppIKDLLPRLTPILRNRHEK 907
                 677888888888888777788888999888888876554 PP

  == domain 5  score: -0.1 bits;  conditional E-value: 0.77
         UME  74 vWatllsnlededleplleqtfal 97 
                 v atll+nl++++ +  +++t+a+
  EPX70794.1 970 VLATLLNNLKVQERQNRVCTTVAI 993
                 678889999999999999988887 PP

  == domain 6  score: 7.0 bits;  conditional E-value: 0.0047
         UME   25 slaekkraikaleeliklagssissalpqimacLqsalei.d 65  
                  +++ +  ++k+l ++++++g++++ ++  i+ +L +al + d
  EPX70794.1 1017 EMNVQNGVLKSLAFMFEYIGEQARDYVYAITPLLANALMDrD 1058
                  66778899****************************998744 PP

>> DRIM  Down-regulated in metastasis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.1      0.24   2.7e+02      89     108 ..     419     438 ..     350     488 .. 0.64
   2 ?   -2.1   0.0      0.77   8.6e+02     424     464 ..     635     675 ..     554     733 .. 0.50
   3 ?   -1.8   0.0      0.62     7e+02     178     218 ..     708     747 ..     655     768 .. 0.75
   4 ?    9.0   0.0   0.00034      0.38     194     237 ..     787     830 ..     781     854 .. 0.83
   5 ?   -0.7   0.0       0.3   3.4e+02     181     222 ..    1011    1052 ..     968    1079 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.24
        DRIM  89 esieeehraelmpvllRiLy 108
                  ++e+++r+ l+ v+ RiLy
  EPX70794.1 419 RTLEDQERHLLVKVIDRILY 438
                 22333333333333333333 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.77
        DRIM 424 dseqassLldlllplLrkpsrrvsektkvelLkilenllrl 464
                 + e as++++ ++++  ++ ++ +e+ k  +Lk++++    
  EPX70794.1 635 EPEYASHFTKRIMKIVLREFSSPDEEMKKIVLKVVSQCAST 675
                 33344455555555555555555555555555555555555 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 0.62
        DRIM 178 devdleevlplrrqlgflnlledvlkelgsklapflpkllk 218
                 ++v +e+++ l  q+g+l++++ ++++++ + +p+ + + +
  EPX70794.1 708 KQV-VETTFVLAGQVGVLQIVDRIVNNFKDESEPYRKMTAE 747
                 344.7888889999999999999999999999988666555 PP

  == domain 4  score: 9.0 bits;  conditional E-value: 0.00034
        DRIM 194 flnlledvlkelgsklapflpkllklllyclaaaqrrlksssee 237
                 +ln  ++v++ lg + +p+lp++++++ly l++ ++++++++++
  EPX70794.1 787 ILNCFSTVVNSLGVRCKPYLPQIVSTILYRLNNKSANVREQAAD 830
                 6999*****************************99888877654 PP

  == domain 5  score: -0.7 bits;  conditional E-value: 0.3
        DRIM  181 dleevlplrrqlgflnlledvlkelgsklapflpkllkllly 222 
                   + ++ +++ q g+l+ l+ +++++g++  +++  +  ll  
  EPX70794.1 1011 ADYRTPEMNVQNGVLKSLAFMFEYIGEQARDYVYAITPLLAN 1052
                  566788888899999999999999999999998877666554 PP

>> MMS19_C  RNAPII transcription regulator C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       1.2   1.3e+03      77     104 ..     397     424 ..     359     480 .. 0.70
   2 ?    6.6   0.0    0.0033       3.7     330     413 ..     601     683 ..     599     689 .. 0.92
   3 ?    1.0   0.1      0.16   1.8e+02      25      95 ..     776     834 ..     729     887 .. 0.67
   4 ?    0.7   0.0      0.19   2.1e+02     332     391 ..    1004    1062 ..    1003    1104 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 1.2
     MMS19_C  77 tdlekeellnsyydrivprlltlvvsaa 104
                 td+  ++ ++ ++++i+p l++++++  
  EPX70794.1 397 TDQARDFGAAALFNQILPLLMERTLEDQ 424
                 4555566666666666666666655433 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0033
     MMS19_C 330 FstvlpklvegfkssdsetkenyLvALshllkhvPkslllpeLptLlPlLlqaLdlpdaevkastLetlksileespslvsehl 413
                 F+++l+ l +g+++   ++ +++L A   ++  + +++  ++ + ++ ++l+  + pd+e+k+ +L++++  + + + + se+l
  EPX70794.1 601 FDSILKPLWSGVQRHRGKSLAAFLKATGFIIPLMEPEYASHFTKRIMKIVLREFSSPDEEMKKIVLKVVSQCAST-DGVSSEYL 683
                 999******************************************************************998874.55555555 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.16
     MMS19_C  25 aLaelssekqlfetlvirllnkldlvlksnessaayahailstllkllekkqtdlekeellnsyydrivpr 95 
                 a++e s+e++++      ++n l + +k+      y   i+st+l+ l++k  ++      ++ + ++v r
  EPX70794.1 776 AFQEQSVEENVILNCFSTVVNSLGVRCKP------YLPQIVSTILYRLNNKSANV------REQAADLVSR 834
                 44444443333333333444444443333......44477777777777777333......3333333333 PP

  == domain 4  score: 0.7 bits;  conditional E-value: 0.19
     MMS19_C  332 tvlpklvegfkssdsetkenyLvALshllkhvPkslllpeLptLlPlLlqaLdlpdaevk 391 
                  tv+p l++ +++ +++ ++ +L +L+ + + + ++    +   + PlL +aL   da  +
  EPX70794.1 1004 TVIPALMADYRTPEMNVQNGVLKSLAFMFEYIGEQA-RDYVYAITPLLANALMDRDAVHR 1062
                  689***************************999986.68999999999999976666644 PP

>> CRM1_C  CRM1 C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.1   0.00025      0.29      64     119 ..     761     814 ..     721     816 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00025
      CRM1_C  64 vlnnlveplleavLvdYkknvpeardaevLsllttlveklenlisdevpkileavf 119
                 + +   e ll+ vL+ ++    ++ +  +L++++t+v++l+  +++ +p+i++ ++
  EPX70794.1 761 IDERTEELLLDGVLFAFQ--EQSVEENVILNCFSTVVNSLGVRCKPYLPQIVSTIL 814
                 5556667899*******9..56778999************************9987 PP

>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1       5.2   5.9e+03      13      22 ..     517     526 ..     511     532 .. 0.81
   2 ?   -1.7   0.1       3.1   3.5e+03       4      22 ..     547     565 ..     546     590 .. 0.68
   3 ?    1.2   0.0      0.37   4.1e+02      21      40 ..     817     836 ..     807     837 .. 0.84
   4 ?    2.0   0.0      0.21   2.3e+02      14      39 ..     894     919 ..     890     921 .. 0.83
   5 ?    1.5   0.0       0.3   3.4e+02      17      40 ..     939     962 ..     938     963 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 5.2
                 HHHHHHHHTT CS
         Arm  13 avppLvrLLs 22 
                 +vp+L+ +L+
  EPX70794.1 517 GVPALLPFLK 526
                 89****9998 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 3.1
                 HHHHHHHTTHHHHHHHHTT CS
         Arm   4 nkdavieaGavppLvrLLs 22 
                 ++ ++  + ++p+L +L +
  EPX70794.1 547 QIALLMGCSVLPHLKSLVE 565
                 7777888899999988876 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.37
                 TTTSSHHHHHHHHHHHHHHT CS
         Arm  21 LssedeevqeeAawALsNLa 40 
                 L++++ +v+e+Aa  +s ++
  EPX70794.1 817 LNNKSANVREQAADLVSRIT 836
                 7799*********9988776 PP

  == domain 4  score: 2.0 bits;  conditional E-value: 0.21
                 HHHHHHHTTTSSHHHHHHHHHHHHHH CS
         Arm  14 vppLvrLLssedeevqeeAawALsNL 39 
                 +p+L   L++ +e+vqe+    ++ +
  EPX70794.1 894 LPRLTPILRNRHEKVQENTIDLVGRI 919
                 899999************87766666 PP

  == domain 5  score: 1.5 bits;  conditional E-value: 0.3
                 HHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm  17 LvrLLssedeevqeeAawALsNLa 40 
                 L+++L+    +++++A  + ++++
  EPX70794.1 939 LIDMLKAHRKSIRRAAINTFGYIS 962
                 99*******************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1181 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       749  (0.0417759); expected 358.6 (0.02)
Passed bias filter:                      529  (0.0295053); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.99u 0.33s 00:00:01.32 Elapsed: 00:00:00.49
# Mc/sec: 7266.45
//
Query:       EPX70795.1  [L=518]
Description: nramp family manganese ion transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-91  306.5  18.9    3.6e-91  305.8  18.9    1.3  1  Nramp     Natural resistance-associated macrophage protein


Domain annotation for each model (and alignments):
>> Nramp  Natural resistance-associated macrophage protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  305.8  18.9     2e-95   3.6e-91       3     354 ..      90     466 ..      88     469 .. 0.95

  Alignments for each domain:
  == domain 1  score: 305.8 bits;  conditional E-value: 2e-95
       Nramp   3 tdlqaGaqfGykLlwvlllstllaillqelsarLGlvTgkglaelirerlpkkvsillwilaelaiiatdlaeviGaAialnllfgipllvgvlitavl 101
                 tdl aGa+f ykLl ++++++l+a+ lq+l+ rLG vTg +la+++re++ k v+i ++ilae+ai+atd+aeviG+A+al++l++ipl++gv+it+++
  EPX70795.1  90 TDLDAGARFQYKLLFIVFIANLFAVYLQSLCCRLGSVTGFDLARNCREQYHKYVCITFYILAEIAIVATDIAEVIGTAVALKILMKIPLVAGVVITILD 188
                 99************************************************************************************************* PP

       Nramp 102 vllllfl.....ekggyrklEaliialvlvialsFiaelflvkpdw.gevlkglvvPslpg..keslllavgilGatvmphnlflhsslvqerkitidr 192
                 vll+l+      +  g+r +Ea++++lvlv+a+sF++ l  v++   g v+kg++ Ps     +e l+  +gilGatvmph lfl s lvq+r ++ d 
  EPX70795.1 189 VLLVLIAwrpegSMLGVRIFEAAVAMLVLVVAISFAVVLGRVHIGGaGHVFKGFL-PSSTVfsREGLYSSIGILGATVMPHSLFLGSGLVQTRLRDFDV 286
                 *****97333223468****************************75389****99.99988999******************************99877 PP

       Nramp 193 ................seke..ealkyeriDtiial.ivaflinlailivaAavly.sggkdvesledaaeaLepllGskaasvlFaigLlaaGlsSti 271
                                 s ++  + l y+ ++++++l ++a++ n++iliva av+y + ++d+++l++++e+L+++++      lFa++Ll +G+s+  
  EPX70795.1 287 rsgnyvpvgdcsdyrpSIQTirHSLTYSVVEVVLSLfTFALFTNSSILIVAGAVFYnTSNADTSDLFSIYELLTKYVSL-SCGKLFAVALLFSGMSAGY 384
                 99*******999888745557789************999*****************99999*****************6.******************* PP

       Nramp 272 tgtlagqyvmegflglrislwlrrlitralafvpalivilligaelelvkllvlsqvllslllPfaliplllltsskklMGef 354
                 ++t+agq+v eg++++++++w rr +tr++a++p l+v++++g+++  + +l +sqv ls+llP++++pl+++t s+k+M  +
  EPX70795.1 385 VCTIAGQMVSEGYINWNLRPWIRRTLTRSIAIIPCLVVAAAVGQSGL-NAVLNASQVCLSILLPILTFPLVMFTCSRKVMSIY 466
                 *********************************************99.********************************765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (518 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1011  (0.0563891); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.71u 0.35s 00:00:01.06 Elapsed: 00:00:00.56
# Mc/sec: 2779.68
//
Query:       EPX70796.1  [L=445]
Description: dolichyl-diphospho-oligosaccharide-protein glycosyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   2.8e-106  356.4   9.3   3.1e-106  356.2   9.3    1.0  1  Ribophorin_I  Ribophorin I
  ------ inclusion threshold ------
      0.059   12.1   0.0      0.089   11.6   0.0    1.2  1  UDPGT         UDP-glucoronosyl and UDP-glucosyl transferase
      0.062   13.3   0.5       0.31   11.0   0.1    2.3  3  DUF2808       Protein of unknown function (DUF2808)


Domain annotation for each model (and alignments):
>> Ribophorin_I  Ribophorin I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  356.2   9.3  5.2e-110  3.1e-106       1     440 [.      22     442 ..      22     443 .. 0.95

  Alignments for each domain:
  == domain 1  score: 356.2 bits;  conditional E-value: 5.2e-110
                   -EEEEEEEEEE-SSSS-EEEEEEEEE--SSS----EEEEE-TTTTTSEEEEEEE-SS..S.......EE---------------EEEEEE-SS---S CS
  Ribophorin_I   1 lenenvertidlkksyvketikitvkntgsepvseyylalpkeeaeklslleaslkdkkkkkktkkveaelkdtskeedlesdvqvyevkLpkplep 97 
                   ++n+n+ r+idl +++++et ++ + n+g+ep+s y +  + +e ek++ ++a +k+ +kk       + l  +        d + +++ L++p++p
    EPX70796.1  22 WKNSNAIRSIDLRSTFIRETNSLIIVNEGNEPESVYRYHQHLNENEKVAEIQAVIKELSKK-------KALITK-------VDDESFDIFLETPVQP 104
                   9****************************************************99865442.......222222.......245679********** PP

                   S-EEEEEEEEEES---EESSSB--TTS-EEEEEEEESS---SS-E.CE-EEEEESSS-EEESS....CCC-ETTEEEE---EEE-SS--S-.EEEEE CS
  Ribophorin_I  98 gekvtlevsyvlthalrPlPaeikqaekQlllfktsayvlspYktkkqktkvklpsskiesytkle.epeksgstltyGpfenvapfslsp.vsvhy 192
                   g+++t++v++ l+h +rPlPa+i+q++ Q+l++kts+++ s Y+t++q+t++ lpss+ies+t+ e +p+++g+tl+y+  + v p+ +++ ++v++
    EPX70796.1 105 GQSLTITVQASLIHGFRPLPAAIDQDDAQYLVYKTSRFLDSVYPTEQQRTRFILPSSEIESFTTFEeSPARKGNTLVYETRSLVVPGDSEEeIQVRF 201
                   ****************************************************************9966666**********98878875555***** PP

                   EE-S--EEEEEEEEEEEEETTTTEEEEEEEEEEEE-S-B-TT---HHHHHH.HHHCS.--SS-SSBS-EEEE--SS----EEE-SSSB---EEEETT CS
  Ribophorin_I 193 ennkplltveklerdievShwggniaveeeyelrNdGAklkgsFsRldyqkseyeknksnkpssalksleaklpagakdvyytDeiGnvstsrlren 289
                   e+++pl+ + +++ ++e+ +  ++i v e++ ++N++Aklk+ F+R  + +++++    n+ s+a++ + ++lp++++dv ytDe+Gn++ts++r++
    EPX70796.1 202 EHTNPLPNALDFKMQVELHEYRQKIDVSERIIVENRSAKLKNPFDRARWYMKNFY----NPVSTAINRFLITLPKDVSDVSYTDEVGNITTSHMRTE 294
                   ***************************************************9999....7889********************************** PP

                   ...E...EEE--SS-B-TT-EEEEEEEEEEEGGGTEEE-TTTEEEEEEES----SSEEECEEEEEEEE-TT-EEEEEE-SS--SEEEEEEE--TT-- CS
  Ribophorin_I 290 ekkketelelkPRfPlfGGWkysFtigynlplseflrkekgdkyvlkvpllesikdvvveevelriiLPegAenvkvsspfpvessevslhktyLDt 386
                    k+  t lel PR+P+fGGW+y + + +++p s+f ++e +++ v+++pl   + ++  e++ +++++PegA+nv+v++p+ v+s++v++ +++LDt
    EPX70796.1 295 PKQ--TVLELLPRYPVFGGWNYLYNLAWSMPYSTFAKQE-DEQTVIRLPLTWVPGELLFEKAVWSYVFPEGATNVSVKMPVTVDSTRVETVHKFLDT 388
                   655..9*******************************55.9999***************************************************** PP

                   S-EEEEEEEE-SEETTTS--EEEEEEE--HHHHTCHHHHHHHHHHHHHHHHHHC CS
  Ribophorin_I 387 tgRpvvtlkkknlvdeeheqkvlvkYdypklallrkpllialavfllfllaivl 440
                   +gR+v+t++ +n++d + +q v ++Y+++++ ++ ++++i+++v++l ++++++
    EPX70796.1 389 KGRQVYTFESTNVIDGSPSQFVEISYNFDSSIMYMRVAIITVLVLVLATAIYLI 442
                   *************************************************99987 PP

>> UDPGT  UDP-glucoronosyl and UDP-glucosyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   1.5e-05     0.089      76     153 ..      48     127 ..      20     143 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 1.5e-05
       UDPGT  76 eease.ktvlkllealk..easdlleklCkevvsnkkllkklqeskfdvvladpvlpcgellAellkiptvyllrdvpgqa 153
                 +e +e ++v ++ ++l+  e ++ ++ + ke+ + k+l++k+++ +fd+ l  pv+p g++l   ++  ++  +r +p+ +
  EPX70796.1  48 NEGNEpESVYRYHQHLNenEKVAEIQAVIKELSKKKALITKVDDESFDIFLETPVQP-GQSLTITVQASLIHGFRPLPAAI 127
                 333445677777777774444445567889***************************.88888777777776666666555 PP

>> DUF2808  Protein of unknown function (DUF2808)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   5.3e-05      0.31      83     109 ..      87     113 ..      58     115 .. 0.71
   2 ?   -3.1   0.0       1.2   6.9e+03       4      33 ..     201     228 ..     188     232 .. 0.64
   3 ?   -1.2   0.0      0.31   1.8e+03      25      58 ..     248     280 ..     233     301 .. 0.66

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 5.3e-05
     DUF2808  83 wdkenrtieitfdePippgktvtvvlk 109
                  + ++++ +i++++P++pg+++t+ ++
  EPX70796.1  87 TKVDDESFDIFLETPVQPGQSLTITVQ 113
                 4458999*************9999875 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 1.2
     DUF2808   4 fsrsprLvyalttgksvnrwgarYyltiev 33 
                 f++ + L +al+++ +v+    +Y+ +i+v
  EPX70796.1 201 FEHTNPLPNALDFKMQVEL--HEYRQKIDV 228
                 5566666666666666655..566655555 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 0.31
     DUF2808  25 arYyltievpkdagealakltisqpdfvedikfd 58 
                 ar+y++   +  + +a++++ i++p+ v+d+++ 
  EPX70796.1 248 ARWYMKNFYNPVS-TAINRFLITLPKDVSDVSYT 280
                 5555555555555.77888888888866666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (445 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       800  (0.0446204); expected 358.6 (0.02)
Passed bias filter:                      548  (0.030565); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.76u 0.37s 00:00:01.12 Elapsed: 00:00:00.60
# Mc/sec: 2232.33
//
Query:       EPX70797.1  [L=348]
Description: FKBP-type peptidyl-prolyl cis-trans isomerase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-27   96.1   0.0    3.6e-27   94.5   0.0    1.8  1  FKBP_C          FKBP-type peptidyl-prolyl cis-trans isomerase
    5.2e-21   75.2   0.1    5.2e-21   75.2   0.1    2.3  1  NPL             Nucleoplasmin-like domain
  ------ inclusion threshold ------
      0.067   12.0   6.4      0.091   11.5   6.4    1.2  1  Presenilin      Presenilin
       0.32   11.0   1.8       0.38   10.8   1.8    1.2  1  Neur_chan_memb  Neurotransmitter-gated ion-channel transmembr
       0.44   10.6   4.9       0.78    9.8   3.1    2.0  2  Dynamin_N       Dynamin family
       0.53   10.3   7.7       0.82    9.6   7.7    1.3  1  DUF4614         Domain of unknown function (DUF4614)
       0.59    8.2   8.6       0.76    7.8   8.6    1.1  1  Hid1            High-temperature-induced dauer-formation prot
        1.5    7.6   9.2        2.1    7.1   9.2    1.1  1  Apt1            Golgi-body localisation protein domain
        1.5    8.6  20.4        1.2    8.9  17.0    2.0  2  RR_TM4-6        Ryanodine Receptor TM 4-6
        2.3    8.9  11.0        3.8    8.2  11.0    1.2  1  Pex14_N         Peroxisomal membrane anchor protein (Pex14p) 
        2.6    8.5  12.9       0.54   10.7   9.3    1.8  2  RNA_pol_Rpc4    RNA polymerase III RPC4
        3.7    6.2  10.7        4.3    6.0  10.7    1.2  1  SAPS            SIT4 phosphatase-associated protein
        3.7    6.5   9.3        5.1    6.0   9.3    1.1  1  SLC12           Solute carrier family 12
        7.5    5.4   7.5         12    4.7   7.5    1.4  1  DUF913          Domain of Unknown Function (DUF913)
        8.2    6.5  10.8         13    5.9  10.8    1.3  1  TP53IP5         Cellular tumour antigen p53-inducible 5


Domain annotation for each model (and alignments):
>> FKBP_C  FKBP-type peptidyl-prolyl cis-trans isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.5   0.0     3e-30   3.6e-27       3      94 .]     258     345 ..     256     345 .. 0.96

  Alignments for each domain:
  == domain 1  score: 94.5 bits;  conditional E-value: 3e-30
                 CBB-TTCEEEEEEEEEETTSSEEEEHCCHTSEEEEETTSSSSCHHHHHHHTTSBTT-EEEEEEEGGGTTTTTTBCTTTB.TTSEEEEEEEEE CS
      FKBP_C   3 eeakegdtVtvhykgkledgkvfdssrsrakplefkvGsgqvikGfeealegmkvGekrtltippelaYgekglaggvippnatLvFeveLl 94 
                   ak+g++V++ y g+l++gkvfd++   +kp+ f++G ++vi+G++ ++ gm+vG++rtl ip+ +aYg+k l g  ip+n++L+F+v+Ll
  EPX70797.1 258 A-AKKGKRVSMRYIGRLKNGKVFDKN-ISGKPFAFNLGLEEVIRGWDLGIAGMQVGGERTLNIPSLMAYGAKRLPG--IPANSDLIFDVKLL 345
                 5.9***********************.69*********************************************66..************97 PP

>> NPL  Nucleoplasmin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.2   0.1   4.4e-24   5.2e-21      17     103 ..      31     118 ..       7     120 .. 0.78

  Alignments for each domain:
  == domain 1  score: 75.2 bits;  conditional E-value: 4.4e-24
                 TSSEEEEEEEE-TT....-BT-EEEEEEEEG....GGT..........EEEEEEEEEBTTBSEE---EEEESS-EEEEEEES---EEEEEE CS
         NPL  17 padlritmaaldpsaekekekgrvtlkvkve....kkkekekeeeeeleefvlctLdpeknyqqpldltfsegeevffkvtGthtVhLtGn 103
                 + +++ tmaaldp     k++++vt+kv ++    +++ + +e+e+e e+fvlctL+++ +yqqp+dl+fs+geev+f+ tG  tV+L+G 
  EPX70797.1  31 EMTVQFTMAALDPA---GKSNEPVTVKVITRlqhsEDEGEGEEKEDEEEQFVLCTLKKGVVYQQPIDLVFSPGEEVYFEKTGGATVYLSGS 118
                 445899*******6...45677766666555211155555556999********************************************6 PP

>> Presenilin  Presenilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   6.4   7.6e-05     0.091     249     306 ..     174     232 ..     144     294 .. 0.49

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 7.6e-05
  Presenilin 249 sesskeeeseeesseksaqsseseeeseeesseaessaeesseeke.seessesseeee 306
                 +e ++++e+ ee++e+++++ +++++++e+++e+++s++++se++   ee+++++++e+
  EPX70797.1 174 EELRSDDEEPEEKQETKSETPQKQDNQNEKKQEKTDSKKRPSEQAPePEEKEKKQKSEK 232
                 22222222222222222122112222211111111111111111110111111111111 PP

>> Neur_chan_memb  Neurotransmitter-gated ion-channel transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   1.8   0.00032      0.38     127     196 ..     183     250 ..      44     270 .. 0.55

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00032
                     ----------------------------------SS---TTGGG--..........-----TTTTTHHHHHHHHH CS
  Neur_chan_memb 127 sseaeelilskskseskkaklseeqgsekastckckckegeeaspstqlsk.....eelspelkkavegvkyiad 196
                     ++e++e++++     +++++ ++++++++++++k   +e+++  ++++  k     ++++   kk++eg  +i+d
      EPX70797.1 183 PEEKQETKSE-----TPQKQDNQNEKKQEKTDSKKRPSEQAPEPEEKE--KkqkseKPAKTYAKKTLEGNVVIQD 250
                     1111111111.....111111111111111111111111111111111..1112235555555666666655555 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.61   7.3e+02      27      56 ..      47      75 ..      42      96 .. 0.65
   2 ?    9.8   3.1   0.00065      0.78      46     107 ..     184     250 ..     149     272 .. 0.78

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.61
                -SSS---S.-EEEEECCT---CCS...SSEE CS
   Dynamin_N 27 gpnptTrr.plelqlgeeeeaseravkeelk 56
                +++p+T + ++ lq++e+e +   ++ke+ +
  EPX70797.1 47 SNEPVTVKvITRLQHSEDEGEG--EEKEDEE 75
                5677776515678888888833..3333332 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00065
                 -C.....CS...SSEEEE.....T-EB--CHHHHHHHHHHHHHHHTSSSS--SS-EEEEEEETTS-SEEEEE CS
   Dynamin_N  46 as.....eravkeelkek.....ekkledfsevreeieketekiagankgiskkvillkilsllvkgltlvD 107
                 ++     +++ +     k     ekk+e+ +  ++  e++ e  ++++k+ s+k+ +++ ++ l+ ++++ D
  EPX70797.1 184 EEkqetkSETPQ-----KqdnqnEKKQEKTDSKKRPSEQAPEPEEKEKKQKSEKPAKTYAKKTLEGNVVIQD 250
                 231211122222.....123456899999999999999999999999*********************9987 PP

>> DUF4614  Domain of unknown function (DUF4614)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   7.7   0.00069      0.82      16      86 ..     181     249 ..     152     271 .. 0.40

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00069
     DUF4614  16 sessssssessssr..slssssesslssksssstdsksssqssestkkrsktktrttvketavqTsdpalayq 86 
                 +e++++ +e++s+    ++++ e++ ++++s+++    s+q +e+++k++k+k+++  k  a +T + ++ +q
  EPX70797.1 181 EEPEEK-QETKSETpqKQDNQNEKKQEKTDSKKR---PSEQAPEPEEKEKKQKSEKPAKTYAKKTLEGNVVIQ 249
                 111111.111111100111111111111222222...223334444444444555555555555555555555 PP

>> Hid1  High-temperature-induced dauer-formation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   8.6   0.00064      0.76     553     679 ..      74     232 ..      69     251 .. 0.43

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.00064
        Hid1 553 gnrnLvYsilrkrkvfealrnltlesaseeiersne...........................................sarldsideeeeenssessr 608
                 + +++v   l+k  v+++  +l ++ ++e   +++                                            + +  +id +e+e ++   r
  EPX70797.1  74 EEEQFVLCTLKKGVVYQQPIDLVFSPGEEVYFEKTGgatvylsgsctvtnvpedsedsdmddyesgddedfifnddglsEDEDFDIDASEDEDEEGGAR 172
                 566777777888888888888888877765555555677888887777777766655555555555444444444333322333333344444444444 PP

        Hid1 609 ieesrsesrspslsevpelksslaitddeskaereksatessssqavsqlremsekarakesaesteesrq 679
                 iee rs+ ++p++++  e+ks+  +++d++++++++++ +++         ++se+a++ e++e++++s++
  EPX70797.1 173 IEELRSDDEEPEEKQ--ETKSETPQKQDNQNEKKQEKTDSKK---------RPSEQAPEPEEKEKKQKSEK 232
                 444333333332111..1111111111111111111111111.........11111111111111111111 PP

>> Apt1  Golgi-body localisation protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   9.2    0.0018       2.1     293     370 ..     143     232 ..     140     276 .. 0.40

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0018
        Apt1 293 eYiFPkrdsdaqea.....smvkessseeddesdeesessssss.........ssssssassssssssrssslelrlkpt.....sstssssssess 370
                 ++iF +++ ++ e+     s      ++ed+e    +e+  +s          ++s++ +++++++++++++ +++++p+      +++++++++++
  EPX70797.1 143 DFIFNDDGLSEDEDfdidaS------EDEDEEGGARIEEL-RSDdeepeekqeTKSETPQKQDNQNEKKQEKTDSKKRPSeqapePEEKEKKQKSEK 232
                 68887777777666433321......11111111111111.11111111111111111112222222221111111112111111111111111111 PP

>> RR_TM4-6  Ryanodine Receptor TM 4-6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.1      0.36   4.3e+02     223     241 ..      64      82 ..      35      93 .. 0.54
   2 ?    8.9  17.0   0.00098       1.2      88     156 ..     171     239 ..     121     251 .. 0.68

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.36
                 ------------------- CS
    RR_TM4-6 223 esaneeeeedeeegtvyfv 241
                 ++ ++ee+edeee+ v   
  EPX70797.1  64 DEGEGEEKEDEEEQFVLCT 82 
                 2223333344444444444 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00098
                 XXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXX..........XXXXXXXXXXXXXXXXXXX CS
    RR_TM4-6  88 kklaeeeeaeeekeeeeepeaeaeekadaengekeekekekeeeekeseeeeeekkkkkkakskkkeea 156
                  + +e  + +ee ee++e+++e+ +k+d++n++k+ek+ +k++ +++++e ee++kk+k +k +k  ++
  EPX70797.1 171 ARIEELRSDDEEPEEKQETKSETPQKQDNQNEKKQEKTDSKKRPSEQAPEPEEKEKKQKSEKPAKTYAK 239
                 334455667777788888888888888888888888877766666666666666665555555444433 PP

>> Pex14_N  Peroxisomal membrane anchor protein (Pex14p) conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2  11.0    0.0031       3.8      39     111 ..     173     238 ..     169     251 .. 0.47

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0031
     Pex14_N  39 IeeaLkraereeeasesa..vaassaseqaqeesasssatpqpqaasqtsqsspspsppaqqqqqqyrpPivtyp 111
                 Iee+ +++e++ee++e++  ++++      q++ +++++++++ +++ +s+++p+p+   ++++q++ +P  ty 
  EPX70797.1 173 IEELRSDDEEPEEKQETKseTPQK------QDN-QNEKKQEKTDSKKRPSEQAPEPE--EKEKKQKSEKPAKTYA 238
                 999999988888877643111111......111.11222222222222222222222..2222333346777774 PP

>> RNA_pol_Rpc4  RNA polymerase III RPC4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1       7.7   9.2e+03      56      56 ..      68      68 ..      42      82 .. 0.50
   2 ?   10.7   9.3   0.00045      0.54      26      75 ..     184     233 ..     128     275 .. 0.57

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 7.7
  RNA_pol_Rpc4 56 e 56
                   
    EPX70797.1 68 G 68
                  1 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00045
  RNA_pol_Rpc4  26 ddkseaesqsaekakaeeeskaekasgaeaeekkskkksskkkkkkkska 75 
                   ++k+e++s++ +k+++++e+k+ek+++++  +++ +++++k+kk+k++k+
    EPX70797.1 184 EEKQETKSETPQKQDNQNEKKQEKTDSKKRPSEQAPEPEEKEKKQKSEKP 233
                   22222222222222222222222222222222222211111111111111 PP

>> SAPS  SIT4 phosphatase-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0  10.7    0.0036       4.3     272     329 ..     155     234 ..      46     255 .. 0.51

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0036
        SAPS 272 s.......................deaskeesaesedltdkdedvsleesksakdenkesdesesdtaeesseededdass 329
                 +                       d++++ee++e+++ t +++d ++e++++++d++k ++e++ + +e++ +++++++++
  EPX70797.1 155 EdfdidasededeeggarieelrsDDEEPEEKQETKSETPQKQDNQNEKKQEKTDSKKRPSEQAPEPEEKE-KKQKSEKPA 234
                 03333222222333334443322222222222222222222222222222222222222222222211111.111112222 PP

>> SLC12  Solute carrier family 12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   9.3    0.0043       5.1     147     207 ..     178     235 ..     131     270 .. 0.39

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0043
       SLC12 147 esekeeeekkkakkkklleekskekeekekleekdsnlslseekkeeekekkkekkkkkek 207
                 + ++e eek+++k+++ +++++++++++ek+++k+  +++ +e +   +++kk+k++k  k
  EPX70797.1 178 SDDEEPEEKQETKSETPQKQDNQNEKKQEKTDSKKRPSEQAPEPE---EKEKKQKSEKPAK 235
                 111111111111111111111111111111111111111111111...1111111111111 PP

>> DUF913  Domain of Unknown Function (DUF913)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   7.5      0.01        12     267     324 ..     182     235 ..     101     248 .. 0.59

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.01
      DUF913 267 sasskseasssssssetkeeekssededvemeda.eeetesesdeseeseeekeknsll 324
                 + ++k+e++s++ +++++++ek     ++e++d+ ++++e+ ++++e+++++k+++++ 
  EPX70797.1 182 EPEEKQETKSETPQKQDNQNEK-----KQEKTDSkKRPSEQAPEPEEKEKKQKSEKPAK 235
                 1222222222222222222211.....12222221122222222222222223333333 PP

>> TP53IP5  Cellular tumour antigen p53-inducible 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9  10.8     0.011        13      70     139 ..     170     239 ..     158     272 .. 0.69

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.011
     TP53IP5  70 neelqearalekkleskklestkepkelkskewkeeskvrnkakgspaavpkkeeqaeaevpktsrgegl 139
                   +++e r+ ++++e k+ ++++ p++ ++++ k++ k+ +k++ s +a +  e++++++ +k+ ++  +
  EPX70797.1 170 GARIEELRSDDEEPEEKQETKSETPQKQDNQNEKKQEKTDSKKRPSEQAPEPEEKEKKQKSEKPAKTYAK 239
                 5678999999999999999999999998877776666666666666666555455555555555444333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (348 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2024  (0.11289); expected 358.6 (0.02)
Passed bias filter:                      819  (0.0456802); expected 358.6 (0.02)
Passed Vit filter:                       234  (0.0130515); expected 17.9 (0.001)
Passed Fwd filter:                        50  (0.00278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.93u 0.38s 00:00:01.31 Elapsed: 00:00:00.53
# Mc/sec: 1986.12
//
Query:       EPX70798.1  [L=98]
Description: acetylornithine aminotransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.4e-11   43.7   0.0    3.1e-09   36.0   0.0    1.9  2  Aminotran_3  Aminotransferase class-III


Domain annotation for each model (and alignments):
>> Aminotran_3  Aminotransferase class-III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.9   0.2   0.00024       4.3      89     130 ..      12      51 ..       3      52 .. 0.84
   2 !   36.0   0.0   1.7e-13   3.1e-09     200     243 ..      54      97 ..      52      98 .] 0.96

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.00024
                  EEEEESSHHHHHHHHHHHHHHHHHHTSHCTT-EEEEETTT-- CS
  Aminotran_3  89 kvflansGseAvetAlKlarkyarekkatektkiiafkgafH 130
                  + ++a++  +A+e+A+K +     ++++ +k+++++  ++fH
   EPX70798.1  12 HKLTATCVVKANESAVKSSGL--AARHKLNKERFLSTINSFH 51 
                  6678888899*******9988..6667899***********9 PP

  == domain 2  score: 36.0 bits;  conditional E-value: 1.7e-13
                  SCETTTTSEB--CCHHHHHHHHHHHHT-EEEEE-TTTTTTTTSS CS
  Aminotran_3 200 piqgegGvvvaspeflaklrelckkhdvllivDEvqtGfGrTGk 243
                  piqgeg ++v++ ++la++relc+++ + l+  E+qt  GrT k
   EPX70798.1  54 PIQGEGWFIVPPFSYLANIRELCTRNKIYLVLNEIQTRYGRTDK 97 
                  9*****************************************76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       409  (0.0228122); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 707.79
//
Query:       EPX70799.1  [L=440]
Description: spindle pole body protein Nuf2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.6e-41  139.5   3.1    7.6e-41  139.5   3.1    2.9  3  Nuf2            Nuf2 family
    3.8e-23   81.8  22.6    3.8e-23   81.8  22.6    5.0  5  DHR10           Designed helical repeat protein 10 domain


Domain annotation for each model (and alignments):
>> Nuf2  Nuf2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.5   3.1   8.5e-45   7.6e-41       2     137 ..       5     140 ..       4     142 .. 0.98
   2 ?    0.4   0.3      0.07   6.3e+02      34      88 ..     181     224 ..     150     257 .. 0.60
   3 ?   -3.1   2.5      0.88   7.9e+03      73      73 ..     365     365 ..     283     423 .. 0.66

  Alignments for each domain:
  == domain 1  score: 139.5 bits;  conditional E-value: 8.5e-45
        Nuf2   2 dsfplldvreIvaclqelgfevteedlakPtpefvqklyeqfleilmgiseedieqaaraaleeleepelyedslpllillrslkrflkacgvedFsls 100
                 ++fpll+ +eI++c+  lg+++++++la+Pt++ v +l+e+fl+ +mg++++d+e +a+++++++e+ e+ ++sl+++ +++  ++f++++ v+dFs++
  EPX70799.1   5 YIFPLLESEEILECIAGLGITFSKKELAQPTSQAVISLCEEFLDMFMGLTSQDLEDKANSLQDTIENFEILRESLRFMFFYKMASQFMQSICVDDFSIQ 103
                 89************************************************************************************************* PP

        Nuf2 101 DllkPdpkRtrriLSaliNFirFreerseifeellee 137
                 Dl+kP+++R++riLS++iNF+++re+++ +fe  +++
  EPX70799.1 104 DLIKPTTNRLKRILSGVINFAKLREQQLLLFEPDIQK 140
                 ****************************999988876 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.07
        Nuf2  34 efvqklyeqflei..lmgiseedieqaaraale....eleepelyedslpllillrslkrf 88 
                 e   +ly+++lei  ++  ++ +++q +++ale    +                   l+ +
  EPX70799.1 181 ERNDQLYQNLLEIkrICSQTKAEYDQIKQEALElkvkH-----------------LELETL 224
                 44445555555432233444444555555555544441.................333332 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 0.88
        Nuf2  73 e 73 
                  
  EPX70799.1 365 M 365
                 1 PP

>> DHR10  Designed helical repeat protein 10 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.1     0.014   1.3e+02      12      36 ..      56      80 ..      53      83 .. 0.85
   2 ?   -3.3   4.8         1   9.1e+03      54      94 ..     146     186 ..     138     190 .. 0.69
   3 ?    2.1   9.0     0.021   1.9e+02      52     101 ..     190     239 ..     176     250 .. 0.88
   4 !   81.8  22.6   4.2e-27   3.8e-23       1     117 []     254     370 ..     254     370 .. 0.98
   5 ?   -3.2   9.5      0.93   8.3e+03      64     109 ..     377     422 ..     369     428 .. 0.63

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.014
       DHR10 12 aelErkarelqakidalqvvekdlr 36
                ++lE ka+ lq +i+ ++ + + lr
  EPX70799.1 56 QDLEDKANSLQDTIENFEILRESLR 80
                68999**********9999888776 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1
       DHR10  54 eakkklkelrdaleekeielrelerkeerlqrqlenaeekl 94 
                 e  + l+ +r++le+    ++e   + + + +q e  +++l
  EPX70799.1 146 ENYSLLNTQRQTLEQEVLLSQEKRGQNQVIIKQNEERNDQL 186
                 55556777777777777777777777777777776666655 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.021
       DHR10  52 leeakkklkelrdaleekeielrelerkeerlqrqlenaeeklerlreqa 101
                 l e k+  +++++++++ ++e+ el+ k+  l+  ++n  +++e+l+ + 
  EPX70799.1 190 LLEIKRICSQTKAEYDQIKQEALELKVKHLELETLISNTLQETEQLQSSI 239
                 567789999*************************************9865 PP

  == domain 4  score: 81.8 bits;  conditional E-value: 4.2e-27
       DHR10   1 seslaeekeelaelErkarelqakidalqvvekdlrsciklleeieaelakleeakkklkelrdaleekeielrelerkeerlqrqlenaeeklerlre 99 
                 s++++ ++++  el++k++ lq k++ l+  e+dl++c+k+lee+ +e+ kle a+  l+++++ +e+  i++r+l+ ++e+l +ql+na+ekl++ ++
  EPX70799.1 254 SDRVQLDRTQQFELDKKSKYLQSKLNELTLTETDLSACVKILEECLVEVDKLEHASNLLSSNQELCEQVDINKRKLDFRKEQLLKQLSNAQEKLQHEQQ 352
                 578999********************************************************************************************* PP

       DHR10 100 qaeekreaakarleelre 117
                 ++++k eaak+r+++++e
  EPX70799.1 353 SRNQKLEAAKQRMDQIKE 370
                 ***************986 PP

  == domain 5  score: -3.2 bits;  conditional E-value: 0.93
       DHR10  64 daleekeielrelerkeerlqrqlenaeeklerlreqaeekreaak 109
                 +  ++k +e+ + ++ +e+ ++q + ++++le +  q + + e+ k
  EPX70799.1 377 QVKSQKAQEADQKQTIIEMTEKQMADMKRELESQSSQISIEFEKLK 422
                 3334555555555555678888888888888888888776655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (440 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3692  (0.205923); expected 358.6 (0.02)
Passed bias filter:                      528  (0.0294495); expected 358.6 (0.02)
Passed Vit filter:                       140  (0.00780858); expected 17.9 (0.001)
Passed Fwd filter:                        25  (0.00139439); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.93u 0.35s 00:00:01.28 Elapsed: 00:00:00.51
# Mc/sec: 2594.84
//
Query:       EPX70800.1  [L=226]
Description: ubiquitin carboxy terminal hydrolase Uch1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      5e-43  147.3   0.0    5.7e-43  147.1   0.0    1.0  1  Peptidase_C12    Ubiquitin carboxyl-terminal hydrolase, famil
  ------ inclusion threshold ------
      0.014   14.7   0.0       0.02   14.3   0.0    1.1  1  Rtf2             Rtf2 RING-finger
      0.026   15.3   0.0      0.045   14.5   0.0    1.4  1  Methyltransf_12  Methyltransferase domain


Domain annotation for each model (and alignments):
>> Peptidase_C12  Ubiquitin carboxyl-terminal hydrolase, family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.1   0.0   9.5e-47   5.7e-43       1     210 [.       2     207 ..       2     208 .. 0.82

  Alignments for each domain:
  == domain 1  score: 147.1 bits;  conditional E-value: 9.5e-47
                    ---EE--HHHHHHHHHHHT--S..EEEE--S.SHHHTTS-..--EEEEEEE.----------.-----..----..T...TS------STTGHHHH CS
  Peptidase_C12   1 wlplEsdPevftelleklGvkgvqfeevyslddellaslp..vyglillfkyieeeeeeeerekeeee..kdeeeeevsekvfFakQtiqnaCgti 92 
                    w plE++Pe+++ +l+klG++++ + ++++l de+ +++p  v +l+l+ +  ++ + +++++++  +         + ++v+++ Q ++naCgt+
     EPX70800.1   2 WKPLENNPEILEPYLQKLGIPNAGVFDLFTL-DEIPEYIPrpVGALLLVLP--SPGKFDKSQNES--KllP-----ADCKEVVWFPQLVSNACGTV 87 
                    99*****************************.6799999555*********..444355554222..2222.....23457*************** PP

                    HHHHHHHH..STS--.-TTSHHHHHHHHHTTS-HHHHHHHHHT-HHHHHHHTTSC...---SSTHHHHS--EEEEEEEEE....TTEEEEE-TTS. CS
  Peptidase_C12  93 AlLhvllNlekeaeeielgseLkkfkeftkelspeergealenseeireahnsfa.segqteapeeeedvafHFiafvpv....ngklyeLDGlke 183
                    Al+h+++N + +++     +  ++f+++++e ++++r+++l+ns+ei+++h++fa +++++e+ +ee+++++H+ +fv+     + + yeLDG++e
     EPX70800.1  88 ALMHAIANGDLSKKS-YYSDFTSNFLKKAREEKADQRANMLKNSKEIATLHAEFAgAPDDEEEGDEEDETDLHYLCFVRGteanDRHFYELDGRRE 182
                    ********8755555.8899999********************************533334444447788********96444469********** PP

                    S-EEEEE--T..TTH.HHH.HHHHHHHT CS
  Peptidase_C12 184 gPidlgeveeeeedl.edavrkviqeri 210
                    gPi++ e+e   +dl + +v +vi+ +i
     EPX70800.1 183 GPIQHPEIE---KDLlDPKVFSVIKGYI 207
                    ********4...3554889999999876 PP

>> Rtf2  Rtf2 RING-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   3.4e-06      0.02      65     128 ..     110     173 ..     103     177 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 3.4e-06
        Rtf2  65 aLldkskekslskaashikglkdvvelkltknpafeeskkdatkdtkeapfiCpltglemngkt 128
                 ++l+k+ e+++ ++a+ +k+ k++ +l+ +   a + +++  ++d++  +++C + g e n+++
  EPX70800.1 110 NFLKKAREEKADQRANMLKNSKEIATLHAEFAGAPDDEEEGDEEDETDLHYLCFVRGTEANDRH 173
                 78999999*******************9998888888888899***************999875 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   7.5e-06     0.045       5      51 ..      84     130 ..      82     164 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 7.5e-06
  Methyltransf_12   5 cGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnv 51 
                      cGt +l++a+++    ++ +++D+ ++++++a+e+ a++++n  +n 
       EPX70800.1  84 CGTVALMHAIANGDLSKKSYYSDFTSNFLKKAREEKADQRANMLKNS 130
                      9*******************************999999998665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       577  (0.0321825); expected 358.6 (0.02)
Passed bias filter:                      463  (0.0258241); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.45
# Mc/sec: 1499.84
//
Query:       EPX70801.1  [L=161]
Description: tropomyosin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-36  126.1  33.0    1.4e-36  125.8  33.0    1.1  1  Tropomyosin_1    Tropomyosin like
    3.3e-12   46.3  37.4    1.6e-06   27.7   7.1    3.0  3  Tropomyosin      Tropomyosin
    2.2e-05   23.9  30.0     0.0054   16.1  21.5    2.3  2  GAS              Growth-arrest specific micro-tubule binding
    8.1e-05   22.8  15.0     0.0041   17.4   6.3    2.8  2  BLOC1_2          Biogenesis of lysosome-related organelles co
    0.00066   19.1  24.1      0.043   13.1   6.7    2.0  2  DUF3450          Protein of unknown function (DUF3450)
     0.0019   18.4  37.2       0.14   12.4   3.8    4.4  4  ABC_tran_CTD     ABC transporter C-terminal domain
     0.0034   17.4  16.5      0.011   15.7   3.4    2.8  3  DUF1664          Protein of unknown function (DUF1664)
     0.0049   16.9   6.5     0.0049   16.9   6.5    2.7  2  CENP-F_leu_zip   Leucine-rich repeats of kinetochore protein 
     0.0064   16.5  17.1      0.012   15.6   5.1    2.6  2  Laminin_II       Laminin Domain II
  ------ inclusion threshold ------
      0.011   16.2   6.3       0.15   12.5   0.2    3.2  2  NPV_P10          Nucleopolyhedrovirus P10 protein
      0.013   15.5   0.4      0.013   15.5   0.4    4.2  3  bZIP_1           bZIP transcription factor
      0.014   15.7  21.8       0.24   11.8   0.5    4.1  4  FlaC_arch        Flagella accessory protein C (FlaC)
      0.016   15.6   3.8      0.016   15.6   3.8    3.6  4  CLZ              C-terminal leucine zipper domain of cyclic n
      0.019   13.9  31.1      0.017   14.0  11.6    2.2  2  Spc7             Spc7 kinetochore protein
       0.02   15.3  13.0       0.02   15.3  13.0    2.1  2  DUF4200          Domain of unknown function (DUF4200)
      0.021   15.1  33.5       0.24   11.6  13.7    2.1  2  ATG16            Autophagy protein 16 (ATG16)
      0.022   15.0  10.5      0.022   15.0  10.5    3.0  2  DUF4164          Domain of unknown function (DUF4164)
      0.024   14.7  34.6      0.095   12.8  13.8    3.1  3  DHR10            Designed helical repeat protein 10 domain
       0.03   14.8   2.7       0.03   14.8   2.7    3.6  3  KELK             KELK-motif containing domain of MRCK Ser/Thr
       0.04   13.6  22.5      0.044   13.5   5.9    2.6  3  Laminin_I        Laminin Domain I
      0.055   13.2  23.2        4.3    7.0  23.2    2.2  1  SHE3             SWI5-dependent HO expression protein 3
      0.066   12.3  18.9       0.49    9.4   3.1    2.8  2  APG17            Autophagy protein Apg17
      0.066   13.3  33.0        1.2    9.2  14.3    2.7  3  TPR_MLP1_2       TPR/MLP1/MLP2-like protein
      0.073   12.6  27.7       0.62    9.6  10.4    2.6  3  Filament         Intermediate filament protein
      0.075   13.3  21.2        1.3    9.3   7.6    2.5  2  KLRAQ            Predicted coiled-coil domain-containing prot
      0.094   13.2  39.1       0.55   10.8  15.6    2.2  2  APG6_N           Apg6 coiled-coil region
       0.11   12.7  31.1       0.28   11.3   7.1    3.7  3  Cep57_CLD_2      Centrosome localisation domain of PPC89
       0.11   12.5   1.3       0.71    9.9   0.5    2.3  2  Baculo_PEP_C     Baculovirus polyhedron envelope protein, PEP
       0.12   12.4  32.8       0.95    9.5   7.4    4.0  3  TMF_DNA_bd       TATA element modulatory factor 1 DNA binding
       0.16   12.2  33.0       0.99    9.6  12.6    2.4  3  TMF_TATA_bd      TATA element modulatory factor 1 TATA bindin
       0.16   12.2  11.0         10    6.4   0.1    3.8  3  WXG100           Proteins of 100 residues with WXG
       0.26   11.7  27.8        2.2    8.7  27.8    1.9  1  Fez1             Fez1
       0.27   11.1  15.6       0.85    9.5   4.7    2.6  2  Sec34            Sec34-like family
       0.28    9.3  28.0       0.69    8.0  25.7    1.9  2  FPP              Filament-like plant protein, long coiled-coi
       0.29   11.2  26.1        0.8    9.8   2.1    2.8  3  ADIP             Afadin- and alpha -actinin-Binding
       0.35   11.1  32.4       0.15   12.3  22.0    2.2  2  Jnk-SapK_ap_N    JNK_SAPK-associated protein-1
       0.38   10.8   2.3        0.4   10.7   0.1    2.2  1  HJURP_C          Holliday junction regulator protein family C
       0.39    9.3  24.8      0.083   11.5   8.0    2.0  2  FapA             Flagellar Assembly Protein A
       0.43   10.7  15.3       0.29   11.2   0.8    3.5  3  ORF6C            ORF6C domain
       0.44   10.2  32.0        1.5    8.4  27.1    2.6  2  Lebercilin       Ciliary protein causing Leber congenital ama
       0.62    9.9  17.9        2.3    8.1   1.6    2.9  3  rRNA_proc-arch   rRNA-processing arch domain
       0.74    9.2  28.9        1.1    8.6  28.9    1.3  1  HMMR_N           Hyaluronan mediated motility receptor N-term
       0.75    9.6  27.9       0.47   10.3  24.8    2.0  2  KASH_CCD         Coiled-coil region of CCDC155 or KASH
       0.79   10.5  24.3       0.68   10.7   7.5    2.2  2  DUF4472          Domain of unknown function (DUF4472)
       0.82    9.6  26.3       0.27   11.2   4.2    2.3  2  Ax_dynein_light  Axonemal dynein light chain
          1    7.4  28.6        1.3    7.0  28.6    1.1  1  HOOK             HOOK protein
        1.2    9.2  30.7       0.26   11.4  12.3    2.1  2  UPF0242          Uncharacterised protein family (UPF0242) N-t
        1.4    6.4  28.5        1.9    5.9  28.5    1.2  1  DUF3584          Protein of unknown function (DUF3584)
        1.4    8.7  11.1        1.2    9.0   5.9    2.1  2  Exo84_C          Exocyst component 84 C-terminal
        1.6    6.8  24.7        6.4    4.8   7.7    2.2  2  EzrA             Septation ring formation regulator, EzrA
        1.6    6.6  20.9       0.09   10.7   6.9    2.0  2  V_ATPase_I       V-type ATPase 116kDa subunit family
        1.7    7.4  32.1        2.6    6.8  32.1    1.3  1  CALCOCO1         Calcium binding and coiled-coil domain (CALC
        1.7    8.4  28.3        1.4    8.7   8.3    2.1  2  DUF724           Protein of unknown function (DUF724)
        1.7    8.3  18.2        0.2   11.4   2.9    2.4  2  DUF745           Protein of unknown function (DUF745)
        2.1    8.5  28.2        1.7    8.8   9.5    2.4  2  BRE1             BRE1 E3 ubiquitin ligase
        2.3    7.1  22.7        1.8    7.4  10.5    2.1  2  IFT57            Intra-flagellar transport protein 57
        2.6    8.3  27.9        5.2    7.4   1.9    3.8  3  Seryl_tRNA_N     Seryl-tRNA synthetase N-terminal domain
        2.8    7.5  17.6        3.4    7.2   4.5    2.5  2  Fzo_mitofusin    fzo-like conserved region
        3.1    8.1  20.7          6    7.2   5.9    2.7  2  DUF5082          Domain of unknown function (DUF5082)
        4.4    7.0  27.5        3.5    7.3  14.6    2.3  2  DUF4201          Domain of unknown function (DUF4201)
        4.7    6.4  21.2       0.59    9.3   6.7    2.0  2  TMPIT            TMPIT-like protein
        5.3    6.8  38.8        3.9    7.2  12.6    2.1  2  ERM              Ezrin/radixin/moesin family
        5.6    7.2  30.9        3.4    7.9   1.1    3.7  4  JIP_LZII         JNK-interacting protein  leucine zipper II
        5.7    5.3  10.0        7.8    4.9  10.0    1.3  1  FUSC             Fusaric acid resistance protein family
          6    6.0  19.0        3.6    6.8   5.5    2.1  2  HemX             HemX, putative uroporphyrinogen-III C-methyl
        6.2    6.8  31.9       0.74    9.8   1.8    4.3  4  Prefoldin_2      Prefoldin subunit
        6.2    7.0  17.5        5.3    7.2   1.9    3.4  2  DUF2730          Protein of unknown function (DUF2730)
        6.8    7.4  21.5        3.3    8.4   3.7    3.8  4  SlyX             SlyX
          7    7.2  19.3    1.5e+04   -3.5  18.5    2.8  0  DUF16            Protein of unknown function DUF16
        7.1    5.1  23.6         14    4.1  10.7    2.0  1  AAA_13           AAA domain
        7.2    5.6  12.6        6.7    5.7   2.6    2.0  2  DUF2009          Protein of unknown function (DUF2009)
        7.5    6.0  26.3        3.7    7.1   9.0    2.0  2  HAUS-augmin3     HAUS augmin-like complex subunit 3
        7.5    6.0  18.2         28    4.1  18.2    1.8  1  Exonuc_VII_L     Exonuclease VII, large subunit
          8    7.6  19.4         15    6.7   1.0    3.4  3  DUF5320          Family of unknown function (DUF5320)
        8.2    7.1  28.1        6.5    7.4  19.6    3.1  3  HIP1_clath_bdg   Clathrin-binding domain of Huntingtin-intera
        8.8    7.1  17.0         44    4.9   5.4    3.1  2  Occludin_ELL     Occludin homology domain
        8.8    5.3  22.9         17    4.3  15.7    2.1  2  Atg14            Vacuolar sorting 38 and autophagy-related su
          9    5.5  15.2         22    4.2  15.2    1.8  1  CorA             CorA-like Mg2+ transporter protein
          9    6.6  27.7        8.7    6.7   9.4    2.2  2  OmpH             Outer membrane protein (OmpH-like)
        9.4    6.2  18.2        2.9    7.9   0.8    3.1  3  DUF4446          Protein of unknown function (DUF4446)
        9.5    5.5  21.2         45    3.3  21.2    1.8  1  DUF4407          Domain of unknown function (DUF4407)
        9.7    7.1  30.2       0.38   11.6   1.3    3.9  3  Rho_Binding      Rho Binding


Domain annotation for each model (and alignments):
>> Tropomyosin_1  Tropomyosin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.8  33.0   6.5e-39   1.4e-36       1     142 [.       7     148 ..       7     149 .. 0.99

  Alignments for each domain:
  == domain 1  score: 125.8 bits;  conditional E-value: 6.5e-39
  Tropomyosin_1   1 klnsLkleaeeaqekaeeleekvKeleqenlekeqeiksLtkknqqleeevekleeklkeakekaeesekkktnnealtrkiqlLEeeleesdkkL 96 
                    k+n+ ++e++ea+ +ae++e+k+Kele++   keqe +sL++k ++ e+ +e++ee++k+ + ka++++ +k + e+l+rki+lLEeele +dk L
     EPX70801.1   7 KINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIKADDETGQKGEVEQLSRKIELLEEELETNDKLL 102
                    89999******************************************************************************************* PP

  Tropomyosin_1  97 kettekLretdvkaeelERkvkaLeqerdewekkyeeleekykeak 142
                    ++ttek+r+tdvkae++ER+v++Le+erd+ e+k+e +++ky++ k
     EPX70801.1 103 RDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIK 148
                    *******************************************988 PP

>> Tropomyosin  Tropomyosin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3  14.9   1.1e-05    0.0024      92     151 ..       6      65 ..       2      70 .. 0.81
   2 !   19.3   5.3   2.6e-06   0.00058      22      74 ..      65     117 ..      64     118 .. 0.90
   3 !   27.7   7.1   7.4e-09   1.6e-06     178     234 ..     102     158 ..      98     161 .] 0.90

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 1.1e-05
  Tropomyosin  92 ekleeleaqlkeakeiaeeadrkyeEvarklvvvesdLeraeeraeaaeskiveLeeeLk 151
                  ek++   a+ +ea ++ae a+ k++E + ++ v e++ e    + ea+es+ +e+eee+k
   EPX70801.1   6 EKINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMK 65 
                  778888888888888888888888888888888888888888888888888888888887 PP

  == domain 2  score: 19.3 bits;  conditional E-value: 2.6e-06
  Tropomyosin  22 kkleeaekkaekaeaEvaalnrriqlleeelerteerleealekLeeaekaad 74 
                  k l+ + + ++ ++ Ev++l r+i+lleeele  ++ l +++ek+ +   +a+
   EPX70801.1  65 KDLRIKADDETGQKGEVEQLSRKIELLEEELETNDKLLRDTTEKMRQTDVKAE 117
                  56777778888999*********************************999987 PP

  == domain 3  score: 27.7 bits;  conditional E-value: 7.4e-09
  Tropomyosin 178 irtLeekLkeaeeRaeeAErsvqkLekevdrledeleaekekykaiseeLdqtlaeL 234
                  +r+ +ek++++  +ae+ Er+vq Le+e d+le++le    ky +i++eLd+  + L
   EPX70801.1 102 LRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQAL 158
                  78999*********************************************9765544 PP

>> GAS  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1  21.5   2.5e-05    0.0054      58     172 ..       3     109 ..       1     118 [. 0.86
   2 !   11.2  11.2   0.00077      0.17      70     136 ..      81     144 ..      78     161 .] 0.49

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 2.5e-05
         GAS  58 rlkepLkkaeeeveeLrkqlknyekdkqslknlkarlkelekelkdlkwehevleqrfekvekerdelykkfeaaiqevqqktglknllLekklkalqe 156
                 +l+e++++a++e +e    + + e   ++lk+l+ ++++ e+e+++l+ +he  e r+e++e+e ++l+ k ++   e+ qk ++++  L +k++ l+e
  EPX70801.1   3 KLREKINAARAETDEA---VSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIKADD---ETGQKGEVEQ--LSRKIELLEE 93 
                 6777888887777765...5666666779*****************************************9999...9999999998..79******** PP

         GAS 157 elEkkeaqleevlaaa 172
                 elE +++ l+++ +++
  EPX70801.1  94 ELETNDKLLRDTTEKM 109
                 ********99988664 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00077
         GAS  70 veeLrkqlknyekdkqslknlkarlkelekelkdlkwehevleqrfekvekerdelykkfeaaiqev 136
                 ve+L ++++  e+   +l+   + l++++++++++ +++e  e r++++e erd+l++k e + +++
  EPX70801.1  81 VEQLSRKIELLEE---ELETNDKLLRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKY 144
                 4444444444444...455555555555555555555555555555555555555555555554433 PP

>> BLOC1_2  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   6.3   1.9e-05    0.0041      11      75 ..      32      96 ..      22     103 .. 0.94
   2 !   10.5   1.0    0.0027      0.59      31      69 ..     118     156 ..      99     161 .] 0.81

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 1.9e-05
     BLOC1_2 11 leaeleatvedyklLeklNeaasekykklkdvaaslekkleklnekyeelqpylqqidqiekqvt 75
                le+++++  ++y+ L + +ea++++ +++++++++l+ k+++   ++ e++++ ++i+ +e++++
  EPX70801.1 32 LEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIKADDETGQKGEVEQLSRKIELLEEELE 96
                899**********************************************************9987 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.0027
     BLOC1_2  31 aasekykklkdvaaslekkleklnekyeelqpylqqidq 69 
                 + ++++++l+++ ++le+kle +  ky++++  l+++ q
  EPX70801.1 118 HFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQ 156
                 556789999999999999999999999999999988876 PP

>> DUF3450  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.3  12.7   0.00035     0.077      16     101 ..       6      91 ..       1      97 [. 0.94
   2 !   13.1   6.7    0.0002     0.043      36     111 ..      85     160 ..      83     161 .] 0.92

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00035
     DUF3450  16 atldqalkeaekavaaaaqsqkkidklddekqellaeyralkeeleslevyneqlerlvasqeqeiasleeqieeieeierelvpl 101
                 +++++a++e+ +av+ a+++++k ++l+ + +  ++ey++l+++ e+ e   e+ e+ +++++ + ++ + q+ e+e+++r+++ l
  EPX70801.1   6 EKINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIKADDETGQKGEVEQLSRKIELL 91 
                 67899****************************************************************************99865 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 0.0002
     DUF3450  36 qkkidklddekqellaeyralkeeleslevyneqlerlvasqeqeiasleeqieeieeierelvpllekmidrLeq 111
                 ++ki+ l++e ++  + +r+ +e+  +++v+ e+ er v+s+e+e+++le+++e ++   ++++  l+++ ++Le+
  EPX70801.1  85 SRKIELLEEELETNDKLLRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQALED 160
                 67899999999999999****************************************9999999999999999986 PP

>> ABC_tran_CTD  ABC transporter C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0  15.1      0.28        61      15      63 ..      20      63 ..       1      67 [. 0.80
   2 !    9.0  13.5    0.0074       1.6       7      59 ..      40      97 ..      37      97 .. 0.85
   3 !    9.9   4.0    0.0039      0.85       6      35 ..      77     106 ..      74     120 .. 0.83
   4 !   12.4   3.8   0.00064      0.14      10      59 ..     116     160 ..     107     161 .] 0.90

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.28
  ABC_tran_CTD 15 aeIeaLEeeiaeleaeladpelysdpeklaelsaeleeleaeLeelyer 63
                  ++ ea E++++ele +++  e     ++   ls++ e+ e+ Lee +e+
    EPX70801.1 20 SRAEAAEAKLKELEHQMSVKE-----QEYESLSRKHEASESRLEEIEEE 63
                  56699*************888.....77788888888888888887775 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0074
  ABC_tran_CTD  7 qreleeleaeIeaLEeeiaeleaeladpelysdpek.....laelsaeleeleaeLee 59
                  ++e+e l ++ ea E +++e+e+e+ d  + +d+e+     + +ls+++e le+eLe+
    EPX70801.1 40 EQEYESLSRKHEASESRLEEIEEEMKDLRIKADDETgqkgeVEQLSRKIELLEEELET 97
                  57899999999999999999999999999988885555677***************96 PP

  == domain 3  score: 9.9 bits;  conditional E-value: 0.0039
  ABC_tran_CTD   6 eqreleeleaeIeaLEeeiaeleaeladpe 35 
                   ++ e e+l ++Ie LEee+++ ++ l d +
    EPX70801.1  77 QKGEVEQLSRKIELLEEELETNDKLLRDTT 106
                   5779*****************999999875 PP

  == domain 4  score: 12.4 bits;  conditional E-value: 0.00064
  ABC_tran_CTD  10 leeleaeIeaLEeeiaeleaeladpelysdpeklaelsaeleeleaeLee 59 
                    e+ e++ ++LE e  +le++l+  +     +k a++ ael+e+ ++Le 
    EPX70801.1 116 AEHFERRVQSLEHERDDLEQKLEGMT-----DKYAKIKAELDEVHQALED 160
                   5889*******************665.....889*************997 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   3.5     0.018       3.9      63     122 ..       3      62 ..       1      64 [. 0.95
   2 !   15.7   3.4   5.2e-05     0.011      62     123 ..      82     143 ..      75     144 .. 0.95
   3 ?    5.1   0.1       0.1        22      86     113 ..     134     161 .]     132     161 .] 0.70

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.018
     DUF1664  63 hLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeavegleskleriee 122
                 +L ++i+   ++ de    +++ +++++e+++++s  +++ es+++  e  es+le+iee
  EPX70801.1   3 KLREKINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEE 62 
                 7999******************************************************97 PP

  == domain 2  score: 15.7 bits;  conditional E-value: 5.2e-05
     DUF1664  62 rhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeaveglesklerieek 123
                 ++Ls++i+ ++++l+ + ++ ++++e++ +   + +++++ v+s+++   +le+kle + +k
  EPX70801.1  82 EQLSRKIELLEEELETNDKLLRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDK 143
                 689*****************************************************998765 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.1
     DUF1664  86 keevtevredlseigedvesvkeavegl 113
                 +++++ + ++ ++i+ ++++v++a e+l
  EPX70801.1 134 EQKLEGMTDKYAKIKAELDEVHQALEDL 161
                 5667777777888888888888777665 PP

>> CENP-F_leu_zip  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3  18.0      0.17        38       7      76 ..      24      96 ..      16      99 .. 0.73
   2 !   16.9   6.5   2.2e-05    0.0049       6      64 ..     103     161 .]      98     161 .] 0.93

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.17
  CENP-F_leu_zip  7 hvlekLKeserkadsLkdkvenLerelemseenqekvileaEtskaevet...lkeeieelaeelreleldLv 76
                     ++ kLKe e++ +  ++  e+L r +e se+ +e+++ e+ + + ++      k e+e+l+++ + le +L+
      EPX70801.1 24 AAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIKADDetgQKGEVEQLSRKIELLEEELE 96
                    5677899999999999999999999999999999988888887655554333566677777777777777776 PP

  == domain 2  score: 16.9 bits;  conditional E-value: 2.2e-05
  CENP-F_leu_zip   6 lhvlekLKeserkadsLkdkvenLerelemseenqekvileaEtskaevetlkeeieel 64 
                     + ++ek++++  ka++++ +v++Le e  ++e+++e ++    + kae+ ++++ +e l
      EPX70801.1 103 RDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQALEDL 161
                     5689************************************************9998865 PP

>> Laminin_II  Laminin Domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   7.5     0.076        17       2      84 ..      12      87 ..      11      96 .. 0.64
   2 !   15.6   5.1   5.5e-05     0.012      18      97 ..      80     156 ..      71     160 .. 0.91

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.076
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTTTTGGGHHHHHHHHHH CS
  Laminin_II  2 kelaaeanetakevleqlaplsqnlentkeklseinrsveetnekvkdankairdArrsvkkLeklapqLldklkelkqleea 84
                ++  +ea + a++ +++l++l+ +++  +++++++ r+        +++   +++ ++++k+L  +a++   +  e++ql+ +
  EPX70801.1 12 RAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKH-------EASESRLEEIEEEMKDLRIKADDETGQKGEVEQLSRK 87
                566788999999999999999999999999999999983.......3444455555666666666665555444444444433 PP

  == domain 2  score: 15.6 bits;  conditional E-value: 5.5e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTTTTGGGHHHHHHHHHH...HHHHHHHHHH CS
  Laminin_II  18 qlaplsqnlentkeklseinrsveetnekvkdankairdArrsvkkLeklapqLldklkelkqleeassslsdniseike 97 
                  +++ls ++e ++e+l++ ++ ++ t+ek+++     +  +r v+ Le++ ++L++kl+ +  +  +   ++++++e+ +
  EPX70801.1  80 EVEQLSRKIELLEEELETNDKLLRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAK---IKAELDEVHQ 156
                 5889999**************************************************9999999988...9999999865 PP

>> NPV_P10  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   1.9      0.47     1e+02      21      34 ..      58      71 ..       1     107 [. 0.58
   2 ?   12.5   0.2    0.0007      0.15      14      66 ..     110     159 ..     106     161 .] 0.86

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.47
     NPV_P10 21 dalqqqvddvqenl 34
                + ++++++d++ + 
  EPX70801.1 58 EEIEEEMKDLRIKA 71
                22333333333333 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 0.0007
     NPV_P10  14 kavddkVdalqqqvddvqenlpdvtelnekLdaqsaqLaeletkvenIqdiLn 66 
                 +++d k +  + +v++++++  d   l++kL++++++ a+++++++++++ L 
  EPX70801.1 110 RQTDVKAEHFERRVQSLEHERDD---LEQKLEGMTDKYAKIKAELDEVHQALE 159
                 67788888999999999999888...889********9999999999998875 PP

>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   5.5       1.2   2.5e+02      32      48 ..      54      70 ..      11      75 .. 0.70
   2 ?    5.3   3.5     0.094        21      25      61 ..      78     111 ..      77     115 .. 0.77
   3 ?   15.5   0.4   6.1e-05     0.013      29      63 ..     117     151 ..     113     152 .. 0.92

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 1.2
                HHHHHHHHHHHHHHHHH CS
      bZIP_1 32 errvkaLekeNksLkse 48
                e+r +++e+e+k+L+ +
  EPX70801.1 54 ESRLEEIEEEMKDLRIK 70
                45556666666666655 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.094
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  25 qaeieeLerrvkaLekeNksLkseleelkkevekLks 61 
                 + e+e+L+r+ + Le+e +      + l+++ ek+++
  EPX70801.1  78 KGEVEQLSRKIELLEEELE---TNDKLLRDTTEKMRQ 111
                 5689***********9987...455556777777765 PP

  == domain 3  score: 15.5 bits;  conditional E-value: 6.1e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  29 eeLerrvkaLekeNksLkseleelkkevekLkskv 63 
                 e  errv+ Le e  +L ++le ++++++k k ++
  EPX70801.1 117 EHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAEL 151
                 6789***************************9875 PP

>> FlaC_arch  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0       5.9   1.3e+03       9      26 ..       1      18 [.       1      27 [. 0.77
   2 ?   10.3   5.3    0.0033      0.72       1      40 [.      28      67 ..      21      70 .. 0.97
   3 ?    5.8   6.8     0.084        18       1      37 [.      56      95 ..      56     126 .. 0.88
   4 ?   11.8   0.5    0.0011      0.24       1      40 [.     122     161 .]     115     161 .] 0.80

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 5.9
   FlaC_arch  9 lsklsteletvkkeneel 26
                ++kl  +++ +++e +e 
  EPX70801.1  1 MDKLREKINAARAETDEA 18
                678888899999988775 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.0033
   FlaC_arch  1 ridelEnklsklsteletvkkeneelsksveelkenVkdl 40
                +++elE ++s  + e e++ ++ e  ++ +ee++e+ kdl
  EPX70801.1 28 KLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDL 67
                799**********************************997 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.084
   FlaC_arch  1 ridelEnklsklst...eletvkkeneelsksveelkenV 37
                r++e+E+++++l +     +  k e e+ls ++e l+e+ 
  EPX70801.1 56 RLEEIEEEMKDLRIkadDETGQKGEVEQLSRKIELLEEEL 95
                89************5544457999************9987 PP

  == domain 4  score: 11.8 bits;  conditional E-value: 0.0011
   FlaC_arch   1 ridelEnklsklsteletvkkeneelsksveelkenVkdl 40 
                 r+++lE + ++l+ +le + ++  +++ +++e+ +  +dl
  EPX70801.1 122 RVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQALEDL 161
                 7788888888888888888888888888888888877665 PP

>> CLZ  C-terminal leucine zipper domain of cyclic nucleotide-gated channels
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   6.5      0.22        47      20      62 ..      16      58 ..       1      63 [. 0.63
   2 ?    2.0   6.1       1.2   2.7e+02      19      70 ..      43      93 ..      37      94 .. 0.80
   3 ?    4.3   5.9      0.24        53      21      70 ..      76     128 ..      64     129 .. 0.68
   4 ?   15.6   3.8   7.3e-05     0.016      11      62 ..     108     159 ..      99     160 .. 0.83

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.22
         CLZ 20 akagaeqkeleekverLessLeaLqtrlarLlaeyessqrkLk 62
                 +a + ++ +e k+++Le ++ + ++ ++ L +++e+s+++L+
  EPX70801.1 16 DEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLE 58
                3344566677777777777777777777777777777776664 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 1.2
         CLZ 19 aakagaeqkeleekverLessLeaLqtrlarLlaeyessqrkLkqRitkLEk 70
                 ++ + +++  e+++e++e++++ L  +     ++  +++ +L ++i+ LE+
  EPX70801.1 43 YESLSRKHEASESRLEEIEEEMKDLRIKADDETGQKGEVE-QLSRKIELLEE 93
                55667889999***************99988777766664.68888888887 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.24
         CLZ  21 kagaeqkeleekverLessLeaLqtrlarLlaeyess...qrkLkqRitkLEk 70 
                  ++ e ++l +k+e Le++Le+ ++ l+ + +++ ++   +++ ++R++ LE+
  EPX70801.1  76 GQKGEVEQLSRKIELLEEELETNDKLLRDTTEKMRQTdvkAEHFERRVQSLEH 128
                 34478899999999999999986666666665555541115668899999997 PP

  == domain 4  score: 15.6 bits;  conditional E-value: 7.3e-05
         CLZ  11 KdglLDeeaakagaeqkeleekverLessLeaLqtrlarLlaeyessqrkLk 62 
                 K+   D +a+  +   ++le+  + Le++Le +++++a++ ae++++++ L+
  EPX70801.1 108 KMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQALE 159
                 5556677766777888999999999999999999999999999999999885 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6  18.2      0.24        53     199     282 ..      13      95 ..       1      98 [. 0.48
   2 ?   14.0  11.6   7.7e-05     0.017     175     258 ..      80     159 ..      74     161 .] 0.88

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.24
        Spc7 199 eeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeaervleeckgwsesevsrlkeevkaleelt 282
                 +e  e+ ++ ++++a+++e++ +++ ++++ e+l+ k e+ +++ +e+eee++   r++   +  ++ ev++l  + + lee++
  EPX70801.1  13 AETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMK-DLRIKADDETGQKGEVEQLSRKIELLEEEL 95 
                 22233333334444444444444444444444444444444444444444444.334555566666777777777777777765 PP

  == domain 2  score: 14.0 bits;  conditional E-value: 7.7e-05
        Spc7 175 ekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeaervle 258
                 e ++l++++e l+e   ele+ + + L+ + e++++ +++ e++++++++l+ ++++le+k+e ++++++++++e+ e  + le
  EPX70801.1  80 EVEQLSRKIELLEE---ELET-NDKLLRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQALE 159
                 66788888888888...5555.6678**************************************************99888776 PP

>> DUF4200  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2  20.8      0.12        26       8     104 ..       1      96 [.       1      97 [. 0.89
   2 ?   15.3  13.0   9.1e-05      0.02      29     107 ..      77     155 ..      70     158 .. 0.94

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.12
     DUF4200   8 mfevqealeakkeeiqrleealkqreeelekkeqeleedllkfdkflkendakraralkkaeeerklkkekeaeikklkaeietlkseiekleekle 104
                 m+++ e+++a+++e  +   +++ +e++l++ e+++  + ++++   ++++a  +r ++  ee ++l+ + + e    k e+e+l  +ie lee+le
  EPX70801.1   1 MDKLREKINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIKADDE-TGQKGEVEQLSRKIELLEEELE 96 
                 788999**********************************************9999887766666666666666.6669***************997 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 9.1e-05
     DUF4200  29 lkqreeelekkeqeleedllkfdkflkendakraralkkaeeerklkkekeaeikklkaeietlkseiekleekleeyk 107
                 +k + e+l +k + lee+l+  dk l++  +k ++   kae  +++ ++ e e  +l++++e +  + +k +++l+e+ 
  EPX70801.1  77 QKGEVEQLSRKIELLEEELETNDKLLRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVH 155
                 677889*********************************************************************9975 PP

>> ATG16  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0  12.4    0.0067       1.5      79     142 ..       4      67 ..       1      75 [. 0.50
   2 ?   11.6  13.7    0.0011      0.24      98     176 ..      82     160 ..      69     161 .] 0.89

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.0067
       ATG16  79 leqklaqlreelaelyksrgelaqrllelneelqkleeklkedeerlaeleaeraaletklkdr 142
                 l +k+ + r+e  e+  + +  + +l+el+ +++++e++ ++ ++++++ e++ +++e+++kd+
  EPX70801.1   4 LREKINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDL 67 
                 4444555555555555555555555555555555555555555555555555555555555554 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 0.0011
       ATG16  98 gelaqrllelneelqkleeklkedeerlaeleaeraaletklkdreeelrekeklvqdlqDElsaLqlqlnqaEeklrk 176
                 ++l+ ++  l+eel++ ++ l+  +e++++   + ++ e++++++e+e  ++e+ ++ + D ++  + +l  + ++l++
  EPX70801.1  82 EQLSRKIELLEEELETNDKLLRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQALED 160
                 688899999****************************************************999999999999888776 PP

>> DUF4164  Domain of unknown function (DUF4164)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   6.1       7.7   1.7e+03       7      47 ..      54      94 ..      45     103 .. 0.71
   2 ?   15.0  10.5    0.0001     0.022       6      77 ..      88     159 ..      80     161 .] 0.85

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 7.7
     DUF4164  7 eaaltrLeaaldsLEkavdrrleaerkrdeleaeiealged 47
                e+ l+++e+ ++ L    d  + ++++ ++l ++ie+l+e+
  EPX70801.1 54 ESRLEEIEEEMKDLRIKADDETGQKGEVEQLSRKIELLEEE 94
                44566667777777777777777777777777777777765 PP

  == domain 2  score: 15.0 bits;  conditional E-value: 0.0001
     DUF4164   6 leaaltrLeaaldsLEkavdrrleaerkrdeleaeiealgedrsRLaeeLdqaearaarleevnrEvsrrLk 77 
                 +e   ++Le+  + L +  +++++++ k + +e++++ l+ +r  L+++L + +++ a++++  +Ev ++L+
  EPX70801.1  88 IELLEEELETNDKLLRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQALE 159
                 45555666666677777888888888888****************************************996 PP

>> DHR10  Designed helical repeat protein 10 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8  13.8   0.00043     0.095      44     104 ..      14      74 ..       4      78 .. 0.91
   2 ?    2.7   4.9      0.56   1.2e+02      70     107 ..      78     115 ..      74     118 .. 0.71
   3 ?    5.6  10.0     0.075        16      44     108 ..      93     158 ..      88     160 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 0.00043
       DHR10  44 eieaelakleeakkklkelrdaleekeielrelerkeerlqrqlenaeeklerlreqaeek 104
                 e  + + + e a++klkel+ +++ ke+e + l+rk+e  + +le  ee++  lr +a+++
  EPX70801.1  14 ETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIKADDE 74 
                 566778999*********************************************9998875 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.56
       DHR10  70 eielrelerkeerlqrqlenaeeklerlreqaeekrea 107
                 + e+++l+rk+e+l+  le   + l   +e++++ + +
  EPX70801.1  78 KGEVEQLSRKIELLEEELETNDKLLRDTTEKMRQTDVK 115
                 56788888888888888888777777777777766555 PP

  == domain 3  score: 5.6 bits;  conditional E-value: 0.075
       DHR10  44 e.ieaelakleeakkklkelrdaleekeielrelerkeerlqrqlenaeeklerlreqaeekreaa 108
                 e +e++ + l+++ +k  ++  + e+ e++++ le++++ l+++le +++k+++ + + +e  +a 
  EPX70801.1  93 EeLETNDKLLRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQAL 158
                 437777777777777777777788888888899999999999999999999999888887776665 PP

>> KELK  KELK-motif containing domain of MRCK Ser/Thr protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   7.0    0.0018       0.4       1      40 [.      28      67 ..      28      75 .. 0.95
   2 ?    4.7   3.2      0.19        41       3      34 ..      82     113 ..      80     118 .. 0.88
   3 ?   14.8   2.7   0.00014      0.03       4      42 ..     118     156 ..     115     159 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.0018
        KELK  1 klkeLekqlrllkqEkeelqkelaeaqErlksqkkeLkda 40
                klkeLe+q+ + +qE e+l+++++ ++ rl + ++e+kd 
  EPX70801.1 28 KLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDL 67
                79************************************95 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.19
        KELK   3 keLekqlrllkqEkeelqkelaeaqErlksqk 34 
                  +L ++++ll++E e   k l ++ E++++ +
  EPX70801.1  82 EQLSRKIELLEEELETNDKLLRDTTEKMRQTD 113
                 5799999********************99876 PP

  == domain 3  score: 14.8 bits;  conditional E-value: 0.00014
        KELK   4 eLekqlrllkqEkeelqkelaeaqErlksqkkeLkdais 42 
                 ++e+++++l++E+++l+++l+ + +++ + k eL + ++
  EPX70801.1 118 HFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQ 156
                 789*******************************98775 PP

>> Laminin_I  Laminin Domain I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   3.4     0.053        12     191     225 ..       3      37 ..       1      49 [. 0.80
   2 ?    6.9   6.8     0.021       4.6      17      75 ..      25      83 ..      18      89 .. 0.86
   3 ?   13.5   5.9    0.0002     0.044      12      86 ..      86     160 ..      80     161 .] 0.89

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.053
   Laminin_I 191 DlrelleeAaaktrdanrlnlanqanlreiekkke 225
                  lre +++A a+t +a  +  a +a+l+e+e+++ 
  EPX70801.1   3 KLREKINAARAETDEAVSRAEAAEAKLKELEHQMS 37 
                 58999999999999999999999999999999885 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.021
   Laminin_I 17 inanledltkeLqeklskesakkskieilekelesLaqeteeLqkkatqvlakaqkvna 75
                 +a+l++l+ +++ k++++++ ++k e +e  le++++e++ L  ka   + +  +v++
  EPX70801.1 25 AEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIKADDETGQKGEVEQ 83
                57899**************************************9999887776666655 PP

  == domain 3  score: 13.5 bits;  conditional E-value: 0.0002
   Laminin_I  12 eapykinanledltkeLqeklskesakkskieilekelesLaqeteeLqkkatqvlakaqkvnaesertlnnake 86 
                 ++++ ++++le   k L+   +k +++ +k+e  e+ ++sL+ e + L +k++ +++k  k++ae ++  +  ++
  EPX70801.1  86 RKIELLEEELETNDKLLRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQALED 160
                 556667888888889999999********************************************9998877665 PP

>> SHE3  SWI5-dependent HO expression protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0  23.2      0.02       4.3      41     201 ..       2     146 ..       1     161 [] 0.80

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.02
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        SHE3  41 skflenlaslkhENdnLsslLkRKerrlkdlekelselkesveelklekkqlkkrlenssaseteleeelerlkvqYdalvdsqkeYkehYqqeieeLk 139
                 +k+ e+++ ++ E d  +s  +  e +lk+le+++s  ++++e+l+ ++++       s+++ +e eee++ l+++ d             + e+e+L+
  EPX70801.1   2 DKLREKINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEA-------SESRLEEIEEEMKDLRIKADDE--------TGQKGEVEQLS 85 
                 577788999999999999999999999999999999888888887776655.......5555567789999999987742........233579999** PP

                 HHHHHHHHHHHSSSXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        SHE3 140 esleklklenekqleelqerissndkdidtkldsynnkkknlesieeeknkkllkkleslas 201
                 +++e l++e e ++++l ++++++ ++ d k ++++ ++++le+   + ++kl+ + ++ a+
  EPX70801.1  86 RKIELLEEELE-TNDKLLRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAK 146
                 ***99999999.89999999999999999999999999999999999999999888777654 PP

>> APG17  Autophagy protein Apg17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   3.1    0.0023      0.49      22      82 ..       6      66 ..       4      74 .. 0.94
   2 ?    6.5   8.3     0.017       3.8      24      88 ..      95     159 ..      67     161 .] 0.61

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0023
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHIIIIIIIIIIIIIIIIIHHHHHHHH CS
       APG17 22 elltsarqeleeavkllakteflrdglkqQlkllekirkslerklekgkeefkdlikelda 82
                e +++ar e +eav  ++ +e   + l++Q+ + e+  +sl+rk e ++++++++++e+++
  EPX70801.1  6 EKINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKD 66
                56899*****************************************************987 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.017
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHIIIIIIIIIIIIIIIIIHHHHHHHHHHHHHH CS
       APG17  24 ltsarqeleeavkllakteflrdglkqQlkllekirkslerklekgkeefkdlikeldaanerLe 88 
                 l++  ++l ++ +++ +t    ++ ++ ++ le+ r+ le+kle + ++++++ +eld+++++Le
  EPX70801.1  95 LETNDKLLRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQALE 159
                 34444555555666666666666666666666666666666666666666666666666666665 PP

>> TPR_MLP1_2  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2  14.3    0.0055       1.2      60     117 ..       2      62 ..       1      65 [. 0.75
   2 ?    3.3   3.3      0.37        81      85     114 ..      44      73 ..      40      79 .. 0.57
   3 ?    8.0  10.5     0.013       2.9      14      95 ..      78     159 ..      71     161 .] 0.91

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.0055
  TPR_MLP1_2  60 qalreelnelkaeiaelkaeaesakaeleeseesweeqkeele...kelselekriedlne 117
                  +lre++n ++ae  e+ ++ae+a+a+l+e e +++ +++e+e   ++ + +e+r+e+++e
  EPX70801.1   2 DKLREKINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYEslsRKHEASESRLEEIEE 62 
                 5789999999999999999999999999999988877777766222466667777777765 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.37
  TPR_MLP1_2  85 aeleeseesweeqkeelekelselekried 114
                 ++l+++ e+ e++ ee+e+e+++l+ + +d
  EPX70801.1  44 ESLSRKHEASESRLEEIEEEMKDLRIKADD 73 
                 445555555666666666666666655555 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.013
  TPR_MLP1_2  14 keekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesakaeleeseeswe 95 
                 k e e++ +k++ l+e+le+  +++++  +k  +  vk +   + +q+l  e ++l+++++ ++++  + kael+e  +++e
  EPX70801.1  78 KGEVEQLSRKIELLEEELETNDKLLRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQALE 159
                 557899999******************************9999*******************************99988776 PP

>> Filament  Intermediate filament protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   9.8     0.018         4     195     278 ..       6      64 ..       1      68 [. 0.48
   2 ?    5.3  11.9     0.057        12      82     144 ..      41     106 ..      39     117 .. 0.81
   3 ?    9.6  10.4    0.0028      0.62     190     268 ..      82     159 ..      66     161 .] 0.83

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.018
                 XXXXXXXXXXXXXXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Filament 195 skleelqeaaeknsealrsakeeitelrrqiqsleieleslkkqkasleaqlaeleerleaeleklqeklseleeelaeireem 278
                 +k++ ++ + ++  + +++a+  ++el +q+  +e e esl  ++++ e++l+e+ee                         em
  EPX70801.1   6 EKINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEE-------------------------EM 64 
                 344444444444445555555555555555555555555555555555555555555.........................44 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.057
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXX CS
    Filament  82 eeledlrkkyekelnkreevEaelkalrkdldeatlarvdLe...kkvesLkeelaflkkvheeEv 144
                 +e+e l  k e   ++ ee+E+e+k+lr + d++t ++ ++e   +k+e L+eel+   k+  +  
  EPX70801.1  41 QEYESLSRKHEASESRLEEIEEEMKDLRIKADDETGQKGEVEqlsRKIELLEEELETNDKLLRDTT 106
                 67899999999999999*********************88663337*********98777655544 PP

  == domain 3  score: 9.6 bits;  conditional E-value: 0.0028
                 XXXXXXXXXXXXXXXXXXXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Filament 190 eewykskleelqeaaeknsealrsakeeitelrrqiqsleieleslkkqkasleaqlaeleerleaeleklqeklsele 268
                 e + ++k+e l+e+ e+n++ lr + e + ++  + ++ e  ++sl+++++ le++l+ + +++++  ++l e  ++le
  EPX70801.1  82 E-QLSRKIELLEEELETNDKLLRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQALE 159
                 3.45889999999999999999999999999999999999999999999999999999999998877666666666655 PP

>> KLRAQ  Predicted coiled-coil domain-containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   7.6    0.0061       1.3      26      76 ..      20      70 ..       2      88 .. 0.76
   2 ?    8.3   8.5     0.012       2.7      18      88 ..      77     148 ..      68     160 .. 0.73

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.0061
       KLRAQ 26 skeaslkeelkekeqslrkseqEvdsLtFrNkqLekrvellqeeleveekk 76
                s+ ++ + +lke e+++   eqE +sL+ + +  e+r+e + ee++    k
  EPX70801.1 20 SRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIK 70
                455667789***********************************9976633 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.012
       KLRAQ  18 kkavleEqs.keaslkeelkekeqslrkseqEvdsLtFrNkqLekrvellqeeleveekkvksksknkseaq 88 
                 +k+ +e  s k + l+eel ++++ lr +++ +   + + ++ e+rv++l +e +  e+k+++   +  +++
  EPX70801.1  77 QKGEVEQLSrKIELLEEELETNDKLLRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIK 148
                 56656554415667899**********************************999998888555544333333 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8  16.4     0.021       4.5      57     128 ..       2      73 ..       1      78 [. 0.80
   2 ?   10.8  15.6    0.0025      0.55      11      94 ..      81     161 .]      72     161 .] 0.79

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.021
      APG6_N  57 eklekeeeelleeLkelekereeleaelaaleeelealeeeeerfwreynelqlelleleeeldsleaqyeh 128
                 +kl+++ +++ +e +e+ +  e+ ea+l++le + + +e+e e   r++ + +  l+e eee++ l  + ++
  EPX70801.1   2 DKLREKINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIKADD 73 
                 578888888888888888888888888888888888888888888888888888888888888888777665 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.0025
      APG6_N  11 leeldkqleqaekerdaYeeflkklkkekkeeekqdeeleeleeeleklekeeeelleeLkelekereeleaelaaleeeleal 94 
                 +e+l +++e +e+e ++  + l+  +++ +++   d + e+ e++++ le e+++l+++L+ + ++ ++++ael + ++ le+l
  EPX70801.1  81 VEQLSRKIELLEEELETNDKLLRDTTEKMRQT---DVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQALEDL 161
                 57788888888888888888888888776664...4588888888888888888888888888888888888888888877765 PP

>> Cep57_CLD_2  Centrosome localisation domain of PPC89
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   7.1    0.0013      0.28      11      53 ..      28      70 ..      24      77 .. 0.92
   2 ?    2.7   2.7      0.64   1.4e+02      47      63 ..      81      97 ..      78     111 .. 0.58
   3 ?   11.2   4.2    0.0014       0.3      12      61 ..     109     158 ..     102     161 .] 0.89

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.0013
  Cep57_CLD_2 11 rLdsltrklqvheeelkrLnkERdsalrqLgvAyeelneLkae 53
                 +L+ l+++ +v e e+++L++ ++ ++++L +  ee  +L+ +
   EPX70801.1 28 KLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIK 70
                 89**********************************9999865 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.64
  Cep57_CLD_2 47 lneLkaevealrkELke 63
                 +++L+++ e l++EL++
   EPX70801.1 81 VEQLSRKIELLEEELET 97
                 44444444444444443 PP

  == domain 3  score: 11.2 bits;  conditional E-value: 0.0014
  Cep57_CLD_2  12 LdsltrklqvheeelkrLnkERdsalrqLgvAyeelneLkaevealrkEL 61 
                    +++ k+++ e   ++L +ERd  +++L    +   + kae++   + L
   EPX70801.1 109 MRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQAL 158
                  56778899999********************************9988766 PP

>> Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.1       1.7   3.7e+02      35      55 ..      45      65 ..       1      70 [. 0.49
   2 ?    9.9   0.5    0.0032      0.71      31     111 ..      80     161 .]      37     161 .] 0.80

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 1.7
  Baculo_PEP_C 35 qlatlldaietqLnalsedlk 55
                   l++  +a e++L++++e++k
    EPX70801.1 45 SLSRKHEASESRLEEIEEEMK 65
                  233334444444444444444 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.0032
  Baculo_PEP_C  31 qilaqlatlldaietqLnalsedlksllaeldtrldtlltnLtdalnalq...dtlrneLtnlnsiltnLlssvtNinstLnnl 111
                   ++  ql++ ++ +e++L++ ++ l++  +e  ++ d  +++ ++ +++l+   d+l+++L++++ + + + +++  + ++L+ l
    EPX70801.1  80 EV-EQLSRKIELLEEELETNDKLLRD-TTEKMRQTDVKAEHFERRVQSLEherDDLEQKLEGMTDKYAKIKAELDEVHQALEDL 161
                   45.68888888888888885555555.444555667778888888888888889999999999999999999998888888765 PP

>> TMF_DNA_bd  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9  13.2     0.057        13      13      72 ..       7      66 ..       6      68 .. 0.82
   2 ?    5.1   4.5       0.1        23      36      71 ..      65     103 ..      62     106 .. 0.71
   3 ?    9.5   7.4    0.0043      0.95      13      72 ..      87     146 ..      85     148 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.057
  TMF_DNA_bd 13 qIaqLmeEGekLskkelklnntikkLrkknkelekeikelkkkleklekeleeleerlke 72
                +I++ ++E  +  +   + ++++k+L  +++  e+e ++l++k e +e+ lee+ee++k 
  EPX70801.1  7 KINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKD 66
                666666666666666677889999999999999999999999999999999999999886 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.1
  TMF_DNA_bd  36 kkLrkknkele...keikelkkkleklekeleeleerlk 71 
                 k Lr k+ + +    e+++l++k+e le+ele+  ++l+
  EPX70801.1  65 KDLRIKADDETgqkGEVEQLSRKIELLEEELETNDKLLR 103
                 556655555444447899999999999999998777665 PP

  == domain 3  score: 9.5 bits;  conditional E-value: 0.0043
  TMF_DNA_bd  13 qIaqLmeEGekLskkelklnntikkLrkknkelekeikelkkkleklekeleeleerlke 72 
                 +I+ L eE+e   k  ++  +++ + + k+++ e  +++l+ + ++le++le +++++++
  EPX70801.1  87 KIELLEEELETNDKLLRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAK 146
                 7999999999888888888888999999999999*********************99876 PP

>> TMF_TATA_bd  TATA element modulatory factor 1 TATA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6  12.6    0.0045      0.99      36      99 ..       6      69 ..       1      75 [. 0.92
   2 ?    2.9   8.5      0.55   1.2e+02      45      95 ..      60     110 ..      59     115 .. 0.90
   3 ?    7.9  12.9     0.016       3.5      14      97 ..      81     161 .]      72     161 .] 0.85

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.0045
  TMF_TATA_bd 36 erleaerdeareeivklmkeneelkelkkeleelekeleelqeryetlLellGeksEeveELra 99
                 e+++a r e+ e + +  +   +lkel+++++  e+e+e+l++++e++   l e +Ee+++Lr 
   EPX70801.1  6 EKINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRI 69
                 678899999999999999********************************************95 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.55
  TMF_TATA_bd  45 areeivklmkeneelkelkkeleelekeleelqeryetlLellGeksEeve 95 
                  ++ee+ +l  + ++ + +k+e+e+l++++e l+e++et  +ll   +E++ 
   EPX70801.1  60 IEEEMKDLRIKADDETGQKGEVEQLSRKIELLEEELETNDKLLRDTTEKMR 110
                  67889999999999999**************************99999875 PP

  == domain 3  score: 7.9 bits;  conditional E-value: 0.016
  TMF_TATA_bd  14 verlsseirrlEgElaslkeelerleaerdeareeivklmkeneelkelkkeleelekeleelqeryetlLellGeksEeveEL 97 
                  ve+ls +i  lE El++  + l       +++r+  vk  +   ++++l++e ++le++le ++++y ++   l e     e+L
   EPX70801.1  81 VEQLSRKIELLEEELETNDKLLRDT---TEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQALEDL 161
                  89************99876655544...456778889999999999***********************999999998888876 PP

>> WXG100  Proteins of 100 residues with WXG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   1.2      0.16        35      46      86 .]      22      62 ..       2      62 .. 0.92
   2 ?    6.0   0.3     0.062        14      51      85 ..      79     113 ..      70     114 .. 0.91
   3 ?    6.4   0.1     0.048        10      54      82 ..     131     159 ..     114     161 .] 0.52

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.16
                CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
      WXG100 46 adafqaefeewkqaaqklvdaLeeisealkqaanafedaDe 86
                a+a +a ++e+  ++    +++e++s++++++ +++e+ +e
  EPX70801.1 22 AEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEE 62
                7889999999999999999**************99999885 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.062
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      WXG100  51 aefeewkqaaqklvdaLeeisealkqaanafedaD 85 
                 +e e++ ++++ l ++Le+  + l+ ++++++++D
  EPX70801.1  79 GEVEQLSRKIELLEEELETNDKLLRDTTEKMRQTD 113
                 6789999999***********************99 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.048
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      WXG100  54 eewkqaaqklvdaLeeisealkqaanafe 82 
                 + + q+++ + d++++i  +l+++++a+e
  EPX70801.1 131 DDLEQKLEGMTDKYAKIKAELDEVHQALE 159
                 34445555555555555555555555555 PP

>> Fez1  Fez1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7  27.8      0.01       2.2      23     150 ..      12     157 ..       1     161 [] 0.71

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.01
        Fez1  23 qaevtqklseivalkaqlrelrakleekeeeikeleesleektlelevcenelqrk..........kseaellrekvekleeelkelreelselsleee 111
                 +ae  + +s   a  a+l+el+++++ ke+e ++l+ + e  +  le++e+e++            k e+e l+ k+e leeel+   + l++++++ +
  EPX70801.1  12 RAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLrikaddetgqKGEVEQLSRKIELLEEELETNDKLLRDTTEKMR 110
                 44555555555567899*********************9999999999999999988889999998888888888888888888888777777666655 PP

        Fez1 112 eaalesdeakaqrqe........aeeleelkreverlraeLkeerqk 150
                 ++ +++++ + + q+        +++le ++ + ++++aeL e +q+
  EPX70801.1 111 QTDVKAEHFERRVQSleherddlEQKLEGMTDKYAKIKAELDEVHQA 157
                 55533333322222244555555667777777777777777777766 PP

>> Sec34  Sec34-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   3.1      0.03       6.5       3      60 ..       6      60 ..       4      72 .. 0.70
   2 ?    9.5   4.7    0.0039      0.85       7      82 ..      83     159 ..      77     161 .] 0.71

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.03
       Sec34  3 dqLeskeeecdelleqtdealeqLeeleekfksvsektsslheaceqlleeqkrleel 60
                +++++ ++e+de ++++++a+ +L+ele++++  +++ +sl+++ e   +   rlee+
  EPX70801.1  6 EKINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASES---RLEEI 60
                56777888888888888888889999888888888888888776664333...33333 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.0039
       Sec34   7 skeeecdelleqtdealeqLeeleekfksvsektsslheaceqlleeqkrleelaeeieekL.kyFeeldpitrkLn 82 
                 + +++++ l e++++  ++L++ +ek+++ + k + ++++ ++l +e+++le+  e +++k  k+ +eld++++ L+
  EPX70801.1  83 QLSRKIELLEEELETNDKLLRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYaKIKAELDEVHQALE 159
                 55566777777888888888888888888888888888888888888888888887776654144556777766664 PP

>> FPP  Filament-like plant protein, long coiled-coil
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0  25.7    0.0032      0.69     707     826 ..      11     134 ..       1     138 [. 0.81
   2 ?    5.7   1.5     0.016       3.4     691     735 ..     117     161 .]     109     161 .] 0.74

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0032
         FPP 707 levelksatenleslkaqlqesEqllaelkseLeslkeskslaetqlkcmkesyesletrate...leaelnelkqkieaLeveLeeekksheeleakc 802
                   +e  +a ++ e++ a+l+e E +++  ++e esl + ++  e+ l++ +e  ++l  +a +    + e+++l +kie Le+eLe++ k  +++  k+
  EPX70801.1  11 ARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIKADDetgQKGEVEQLSRKIELLEEELETNDKLLRDTTEKM 109
                 456677888899999999999999999999999999999999999999999999999998754222689****************************** PP

         FPP 803 kelqeqlervekkevs.kssaeeed 826
                 ++ + + e  e++  s +++ ++ +
  EPX70801.1 110 RQTDVKAEHFERRVQSlEHERDDLE 134
                 *********9865555334444333 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.016
         FPP 691 kllkeeleelksekenlevelksatenleslkaqlqesEqllael 735
                 ++ +  +++l+ e+++le +l+ +t++  ++ka l e  q l++l
  EPX70801.1 117 EHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQALEDL 161
                 455667778888888888888888888888888888888887765 PP

>> ADIP  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   9.3     0.036         8      58     126 ..       4      72 ..       2      77 .. 0.78
   2 ?    4.4   1.9      0.17        38      82     113 ..      80     111 ..      77     116 .. 0.72
   3 ?    9.8   2.1    0.0037       0.8      56      97 ..     117     158 ..     108     161 .] 0.54

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.036
        ADIP  58 lnetirkleaeierlqskierlktqleqlerelalvqakerqlekklktleqklknekeelqrlknalq 126
                 l e+i+  +ae +   s+ e  +++l++le ++++ +++  +l +k ++ e+ l +  ee++ l+ +++
  EPX70801.1   4 LREKINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIKAD 72 
                 567888888888888888888888888888888888888888888888888888888888877776665 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.17
        ADIP  82 qleqlerelalvqakerqlekklktleqklkn 113
                 ++eql r+++l+++++ ++ k l+++++k+++
  EPX70801.1  80 EVEQLSRKIELLEEELETNDKLLRDTTEKMRQ 111
                 57788888888888888888888887777765 PP

  == domain 3  score: 9.8 bits;  conditional E-value: 0.0037
        ADIP  56 eslnetirkleaeierlqskierlktqleqlerelalvqake 97 
                 e +++++++le+e + l++k e +++++++ + el+ v++++
  EPX70801.1 117 EHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQAL 158
                 455566666666666666666666666666666666555544 PP

>> Jnk-SapK_ap_N  JNK_SAPK-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6  11.1      0.16        36      39      87 ..      16      64 ..       1      66 [. 0.67
   2 ?   12.3  22.0   0.00068      0.15      39     150 ..      44     154 ..      42     161 .] 0.88

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.16
  Jnk-SapK_ap_N 39 eslasrneeeeaeleelreeleqLeteyerekelrkraeeeleeiedqw 87
                   ++++sr e+ ea+l+el+ +++  e+eye    +++++e +leeie+++
     EPX70801.1 16 DEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEM 64
                   5666777777777777777777777777777777777777777777665 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 0.00068
  Jnk-SapK_ap_N  39 eslasrneeeeaeleelreeleqLeteyerekelrkraeeeleeiedqweeerkelqekveqleeenrelelkaknaadqlsrleekeaelkkeys 134
                    esl  ++e+ e++lee +ee+++L+ + ++e+ ++ + e +l ++ + +eee ++ ++ + +++e++r+ ++ka+ ++ ++++le++ ++l+++ +
     EPX70801.1  44 ESLSRKHEASESRLEEIEEEMKDLRIKADDETGQKGEVE-QLSRKIELLEEELETNDKLLRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLE 138
                    7889999*******************9999986665555.67777778999999999999*********************************999 PP

  Jnk-SapK_ap_N 135 klheretellkklkel 150
                      ++++ ++  +l e+
     EPX70801.1 139 GMTDKYAKIKAELDEV 154
                    9999999887777776 PP

>> HJURP_C  Holliday junction regulator protein family C-terminal repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1    0.0018       0.4      21      37 ..     141     157 ..     130     159 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.0018
     HJURP_C  21 enkYreIkeeFDkLhqk 37 
                  +kY +Ik e D  hq 
  EPX70801.1 141 TDKYAKIKAELDEVHQA 157
                 69*************95 PP

>> FapA  Flagellar Assembly Protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   9.6      0.06        13     334     411 ..       3      74 ..       1      82 [. 0.64
   2 ?   11.5   8.0   0.00038     0.083     337     411 ..      79     154 ..      71     159 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.06
        FapA 334 elkeklkeleeeleeleeeleklkkkikklpklkaekqlesekkeqlkklletkeklkeeleeleeelkelkeelesk 411
                 +l+ek+++ + e  e  ++ e  ++k+k+l+       + s k++++++l ++ e+ +++lee+eee+k+l  + ++ 
  EPX70801.1   3 KLREKINAARAETDEAVSRAEAAEAKLKELEH------QMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIKADDE 74 
                 34444555555555555555555555555554......5677889999999999999999999999999887766665 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 0.00038
        FapA 337 eklkeleeeleeleeeleklkkkikklpklkaekqlesek.keqlkklletkeklkeeleeleeelkelkeelesk 411
                  ++++l +++e leeele+ +k ++   ++  + ++++e+ +  +++l++++  l+++le ++++++++k+el++ 
  EPX70801.1  79 GEVEQLSRKIELLEEELETNDKLLRDTTEKMRQTDVKAEHfERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEV 154
                 46799******************77777766666666665155789999999*******************99886 PP

>> ORF6C  ORF6C domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.8    0.0013      0.29       8      45 ..      14      51 ..       7      53 .. 0.85
   2 ?    4.5   1.1      0.16        35      11      45 ..      52      86 ..      49      92 .. 0.80
   3 ?    4.2   0.9       0.2        43       5      30 ..     105     130 ..     101     157 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.0013
       ORF6C  8 alkehdekieeidervkkLeenmpldesekeeiqkkvk 45
                ++ e+ ++ e+ + ++k+Le +m ++e+e+e++++k +
  EPX70801.1 14 ETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHE 51
                56677889999***********************9865 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.16
       ORF6C 11 ehdekieeidervkkLeenmpldesekeeiqkkvk 45
                  ++++eei+e++k+L+ ++  ++ +k+e++++ +
  EPX70801.1 52 ASESRLEEIEEEMKDLRIKADDETGQKGEVEQLSR 86
                56899***********9888777777777777655 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.2
       ORF6C   5 llealkehdekieeidervkkLeenm 30 
                 + e+  ++d k e+ + rv++Le + 
  EPX70801.1 105 TTEKMRQTDVKAEHFERRVQSLEHER 130
                 568889999999999****9999764 PP

>> Lebercilin  Ciliary protein causing Leber congenital amaurosis disease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   2.7      0.17        38     164     193 .]       7      36 ..       1      42 [. 0.42
   2 ?    8.4  27.1     0.007       1.5      72     188 ..      32     153 ..      30     161 .] 0.85

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.17
  Lebercilin 164 ktkeaqeevkalqeeierlkqklkeKereL 193
                 k+++a++e++++ ++ e  + klke e+++
  EPX70801.1   7 KINAARAETDEAVSRAEAAEAKLKELEHQM 36 
                 334444444444444444444444444332 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.007
  Lebercilin  72 lrerlRksqekerelekklkekeaellrlkdklkklkkLsedk..nLaereeLqkkLeeleakleekeekikeLerkle...leeksfrrqlaaekkkt 165
                 l  ++  +++++++l++k+  +e++l+++++++k+l+  ++d   +  e e+L++k+e le++le++++ +++   k++   ++ + f+r++++ +   
  EPX70801.1  32 LEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIKADDEtgQKGEVEQLSRKIELLEEELETNDKLLRDTTEKMRqtdVKAEHFERRVQSLEHER 130
                 677888899999*************************999987225689*******************9999887655511166788999999999999 PP

  Lebercilin 166 keaqeevkalqeeierlkqklke 188
                  +++++++ +++++ ++k +l e
  EPX70801.1 131 DDLEQKLEGMTDKYAKIKAELDE 153
                 99999999999999999998877 PP

>> rRNA_proc-arch  rRNA-processing arch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   7.5      0.03       6.5     184     268 ..      10      95 ..       1      97 [. 0.66
   2 ?    3.6   1.5      0.25        54     217     251 ..      79     112 ..      62     118 .. 0.70
   3 ?    8.1   1.6      0.01       2.3      12      59 ..     111     158 ..     109     161 .] 0.87

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.03
                     THHHHHHHHHHHHHHHSS---B--TTTTS----HHHHHHHHHHHHHHHHHHTSGG.GS....SSHHHHHHHHHHHHHHHHHHHHHHHHH CS
  rRNA_proc-arch 184 eareevakavqelkrrfpgiplldpikdmkikdeefkkllkkiealesrlaknpllhs....pnleelyalyekkvalqeeikelkkei 268
                     +ar+e+ +av +++    + +l    ++m +k++e+++l +k ea esrl++ +         + +++  +  + ++l ++i+ l++e+
      EPX70801.1  10 AARAETDEAVSRAEAA--EAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEE-EMkdlrIKADDETGQKGEVEQLSRKIELLEEEL 95 
                     4556666666666665..455555588***********************99443.221233446666666666677777777777666 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.25
                     HHHHHHHHHHHHHHHHHHTSGG.GSSSHHHHHHHH CS
  rRNA_proc-arch 217 eefkkllkkiealesrlaknpllhspnleelyaly 251
                      e+++l +kie le++l++n  l  ++ +e++ + 
      EPX70801.1  79 GEVEQLSRKIELLEEELETNDKL-LRDTTEKMRQT 112
                     46778999999999999997642.45555555555 PP

  == domain 3  score: 8.1 bits;  conditional E-value: 0.01
                     HHHHHHHHHHHHHHHHHHHHHTC--TTHHHHHHHHHHHHHHHHHHHHH CS
  rRNA_proc-arch  12 qnqkslpelekklkeleeelksitiedeedieeyyklrqqleelreei 59 
                     q++ ++   e++++ le+e++ ++ + e   ++y k++ +l+e+++ +
      EPX70801.1 111 QTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQAL 158
                     667778889999**********9988999999*********9998765 PP

>> HMMR_N  Hyaluronan mediated motility receptor N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6  28.9    0.0051       1.1     171     322 ..       9     159 ..       1     160 [. 0.78

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0051
      HMMR_N 171 nkleakekevsvkQedmeaklqvtqknLeeskakvaqLkeklvslekekieekseteklleyieelsnvseqlekykldiaqleellkekndeiesLks 269
                 n   a + e++ + e  eakl+++++++    ++   L  k  ++e   +e  +e++ l    +     + ++e+ + +i+ lee l+++++ + +  +
  EPX70801.1   9 NAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIKADDETGQKGEVEQLSRKIELLEEELETNDKLLRDTTE 107
                 34455667889999**************9999*******9999998887777777788877777777777888999*************9999988888 PP

      HMMR_N 270 sLeekeqelskqvkdlnekckllekek...eelvreeeekeqtlsaEleelkeklk 322
                 ++++ ++    +++  + +++ le+e+   e++++    k  +++aEl+e++++l+
  EPX70801.1 108 KMRQTDV----KAEHFERRVQSLEHERddlEQKLEGMTDKYAKIKAELDEVHQALE 159
                 8777666....7777788888888665111444556667888999*****999885 PP

>> KASH_CCD  Coiled-coil region of CCDC155 or KASH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   7.8       2.8   6.2e+02     107     163 ..       4      64 ..       1      71 [. 0.30
   2 ?   10.3  24.8    0.0021      0.47      13     129 ..      32     155 ..      27     161 .] 0.77

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 2.8
    KASH_CCD 107 Lqeenikllaekdelkkklk....eLlkekaeLkkqlheleellaekealleektkqieeL 163
                 L e++   +ae+de  ++ +    +L + + ++  + +e+e+l  + ea+ +  ++  ee+
  EPX70801.1   4 LREKINAARAETDEAVSRAEaaeaKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEM 64 
                 3333333333333333332211112223333333333334444333333222222222222 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.0021
    KASH_CCD  13 LqlnNkkLaeenskLkkavetaeetnakLteeieeLkkklk..stQ.....qalqkaklleeEleelkalvkeleEkrarlkaqnkqlekenqsLiaki 104
                 L++     ++e+++L ++ e++e   + + ee+++L+ k+    +Q     q++ k +lleeEle   +l++++ Ek ++   ++++ e+  qsL+ + 
  EPX70801.1  32 LEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIKADdeTGQkgeveQLSRKIELLEEELETNDKLLRDTTEKMRQTDVKAEHFERRVQSLEHER 130
                 555555556899*************************988522334233338999******************************99999999999999 PP

    KASH_CCD 105 esLqeenikllaekdelkkklkeLl 129
                 ++L+++++ ++    + k  l e  
  EPX70801.1 131 DDLEQKLEGMTDKYAKIKAELDEVH 155
                 9998887766655555555555444 PP

>> DUF4472  Domain of unknown function (DUF4472)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   7.5    0.0031      0.68      54     106 ..      11      63 ..       2      64 .. 0.88
   2 ?    5.9   8.7     0.098        21      28      94 ..      92     159 ..      77     161 .] 0.67

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.0031
     DUF4472  54 aaeeiqslrerlaeleeekkeleeeyvvlkknyqalekefekekkkqqelsle 106
                 a+ e +++ +r +++e++ kele +++v +++y +l++++e+ +++ +e+++e
  EPX70801.1  11 ARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEE 63 
                 6667788899999***********************************99887 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.098
     DUF4472  28 aekfelknkvlalenr.vlelelerekaaeeiqslrerlaeleeekkeleeeyvvlkknyqalekefe 94 
                 +e+ e + k+l+   + + +++++ e+ ++  qsl+++ + le++ + ++++y+ +k ++ ++ +++e
  EPX70801.1  92 EEELETNDKLLRDTTEkMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQALE 159
                 56667777777765443777777777777777777777777777777777777777777776666655 PP

>> Ax_dynein_light  Axonemal dynein light chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4  14.2      0.15        33     113     186 ..      21      96 ..       1      97 [. 0.82
   2 ?   11.2   4.2    0.0012      0.27     113     162 ..     108     157 ..      98     160 .. 0.86

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.15
  Ax_dynein_light 113 kalqaeqgkselekkikeLeeekeelekqvaelkaklealekrekerr..qeeekkheeeieflkksnqqlkeqle 186
                      +a  ae + +ele +++  e+e e+l ++ +  +++le++e++ k+ r  + +e  ++ e+e l ++ + l+e+le
       EPX70801.1  21 RAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRikADDETGQKGEVEQLSRKIELLEEELE 96 
                      5557889999999999999**********************999986522667889999**************998 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.0012
  Ax_dynein_light 113 kalqaeqgkselekkikeLeeekeelekqvaelkaklealekrekerrqe 162
                      k+ q++ + +++e+++++Le+e+++le++++ ++ k+++++++  e  q+
       EPX70801.1 108 KMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQA 157
                      55678888999999*************************99998887776 PP

>> HOOK  HOOK protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0  28.6    0.0061       1.3     454     598 ..       4     147 ..       2     160 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0061
        HOOK 454 vreklirLqhENKmLklkqegseeekltelqelledanrrkneLetenrlanqrileLeaqveelqkalqeqgskaedssllkkkleehleklkevqee 552
                 +rek+   ++E     ++  +  e kl+el++++  ++++ ++L  ++ +++ r++e+e+++ +l+ + +++ +++ +  +l +k+e + e+l+  ++ 
  EPX70801.1   4 LREKINAARAETDEA-VSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIKADDETGQKGEVEQLSRKIELLEEELETNDKL 101
                 566776666666666.3444455899999999999999999****9999999******99999999888877777777799999999999999999999 PP

        HOOK 553 lqkkkeqleelepklssnkqkieeleeaLkkkdedlkameerYkky 598
                 l+  +e + +++ k+++  +++++le+     ++ l+ m ++Y k 
  EPX70801.1 102 LRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKI 147
                 9999999999999999999999999999999999999999999775 PP

>> UPF0242  Uncharacterised protein family (UPF0242) N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5  13.8      0.31        68      85     149 ..      16      80 ..       1      87 [. 0.74
   2 ?   11.4  12.3    0.0012      0.26      65     143 ..      76     154 ..      67     160 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.31
     UPF0242  85 ktkeealeelqeeeeeLkeeldakeeelerlkeenqqLqekleaiaedfeelkleleeqLaekqe 149
                 ++     e ++++ +eL+++++ ke+e e l ++ +  +++le+i e++++l+ +++++  +k e
  EPX70801.1  16 DEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIKADDETGQKGE 80 
                 44444567777888888889999999999999999999999999999999999999988777755 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.0012
     UPF0242  65 lekskleekeaklteldeglktkeealeelqeeeeeLkeeldakeeelerlkeenqqLqekleaiaedfeelkleleeq 143
                  +k ++e+  +k+  l+e+l+t+++ l++ +e+ ++   + ++ e+ ++ l++e   L++kle +   +++ k el+e 
  EPX70801.1  76 GQKGEVEQLSRKIELLEEELETNDKLLRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEV 154
                 37788888888999999999***********************************************999999999884 PP

>> DUF3584  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9  28.5    0.0087       1.9     602     757 ..       2     157 ..       1     160 [. 0.76

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0087
     DUF3584 602 eeLrerlqaleealqsaeakqkqaeeelkqlnaeleeakravaeaatalknardtlerlqnekesekdklekaiae..rkqqaeeqlqkldaqlkqlee 698
                 ++Lre+++a+  + ++a +++++ae++lk+l+ ++  ++++ +   ++ + ++ +le +++e++ ++ k +  + +  + +q  ++++ l+++l+ +++
  EPX70801.1   2 DKLREKINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIKADDETGQkgEVEQLSRKIELLEEELETNDK 100
                 578999999999999999999999999999999999888888888889999999999999999998888877765411556777888888888888888 PP

     DUF3584 699 qqkaaleelkedlseerlekkakwqevvgeldeqlaelkkaieaartqakarlkeleea 757
                   ++  e+++++  ++  +++  +q ++ e+d+ +++l+  +  ++++ ka+l+e+ +a
  EPX70801.1 101 LLRDTTEKMRQTDVKAE-HFERRVQSLEHERDDLEQKLE-GMTDKYAKIKAELDEVHQA 157
                 88888888776555554.677778888888888777775.4566777888888877665 PP

>> Exo84_C  Exocyst component 84 C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   5.9    0.0053       1.2      12      88 ..       8      86 ..       1     112 [. 0.76
   2 ?    3.1   0.4      0.33        71      13      53 ..     113     149 ..     100     161 .] 0.72

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.0053
     Exo84_C 12 ieiarrkFeeAVdlleklesklkklskklkdeea..vlqdlislkveqrreelasklsrellsknevkklksnvslLir 88
                i+ ar + +eAV++ e +e klk+l+++++ +e      ++ +   e+r ee+ +++++  ++ ++ + +k +v++L r
  EPX70801.1  8 INAARAETDEAVSRAEAAEAKLKELEHQMSVKEQeyESLSRKHEASESRLEEIEEEMKDLRIKADDETGQKGEVEQLSR 86
                7789999*******************99985443003334444556778888888888888888888888888999876 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.33
     Exo84_C  13 eiarrkFeeAVdlleklesklkklskklkdeeavlqdlisl 53 
                 ++   +Fe  V++le+ ++ l++  ++++d+ a     i++
  EPX70801.1 113 DVKAEHFERRVQSLEHERDDLEQKLEGMTDKYA----KIKA 149
                 677889********9999999988888887644....3333 PP

>> EzrA  Septation ring formation regulator, EzrA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   7.7     0.029       6.4     101     396 ..       6      65 ..       1      68 [. 0.50
   2 ?    4.8  21.5      0.03       6.5     252     390 ..      27     160 ..      25     161 .] 0.79

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.029
                 HHHHHHHHHHHHHHHHHHHHHHHHTHHHHTTTTTHHHHHHHHHHHHHHHHT--TTTTHHHHHHHHHHHHHHHH----------------HHHHHHHHHH CS
        EzrA 101 kklaeleeeldeveekikkileelkelteseeknreeieklkekYrelrkkllanrfsygealeelekqleniekefsefeeltengdyveakeilkkl 199
                 +k++++++e de+ +++++  ++lkel ++ + +++e+e+l  k +  + +l+                                              
  EPX70801.1   6 EKINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLE---------------------------------------------- 58 
                 55555555555555555555555555555555555555555555555555544.............................................. PP

                 HHHHHHHHHHHHHHHHHHTTTTTTSHHHHHHHHHHHHHSTTS--SGGGSSSSSHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHHHHHHH CS
        EzrA 200 eeeideleevieeiPelleelkkelpkqleelkegykemkeegYaleelniekeieelekkieeilerlkeleledveeelktieeeidsLyddlekEv 298
                                                                                                                    
  EPX70801.1   - ---------------------------------------------------------------------------------------------------   -
                 ................................................................................................... PP

                 HHHHHHTTTSSSSSHHHHT--HHHHTTGGG-TTTS-GGGSSTTTSTTHHHHHHHHHHHHHHHHHHHHHHS-SS---STTGGGTHHHHHHHHHHHHHHH CS
        EzrA 299 eAkkeveknlkelkeklehlekqnkelkeeldrlkqsYeLseeeleklrelekelkelekdyeeleekleekkvaYSelqeeleeleekleeieekqe 396
                                                                                                            eiee+ +
  EPX70801.1  59 -------------------------------------------------------------------------------------------EIEEEMK 65 
                 ...........................................................................................4444444 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.03
                 SHHHHHHHHHHHHHHHHTT-..-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSSHHHHT--HHHHTTGGG-TTTS-GGGSSTTTSTTHHH CS
        EzrA 252 keieelekkieeilerlkel..eledveeelktieeeidsLyddlekEveAkkeveknlkelkeklehlekqnkelkeeldrlkqsYeLseeeleklre 348
                  +++ele++++   ++ ++l  + e++e+ l++ieee+++L    + E   k eve+ +++++   e+le++ k l++ +++++q+         k++ 
  EPX70801.1  27 AKLKELEHQMSVKEQEYESLsrKHEASESRLEEIEEEMKDLRIKADDETGQKGEVEQLSRKIELLEEELETNDKLLRDTTEKMRQT-------DVKAEH 118
                 67888888888888888888556778888899999999999999999999999999988888888888888888888888888775.......236777 PP

                 HHHHHHHHHHHHHHHHHHHS-SS---STTGGGTHHHHHHHHH CS
        EzrA 349 lekelkelekdyeeleekleekkvaYSelqeeleeleeklee 390
                 +e+++++le++ ++le+kle  +  Y +++ el+e+ + le+
  EPX70801.1 119 FERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQALED 160
                 888888888888888888888888888888888888888875 PP

>> V_ATPase_I  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   6.2      0.16        35      26     105 ..      16      63 ..       1      80 [. 0.37
   2 ?   10.7   6.9   0.00041      0.09      32     104 ..      81     156 ..      75     159 .. 0.85

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.16
  V_ATPase_I  26 vkevrrcdemerklrfleeeieklekavikeeeaeesleapeekeldeleeelekleeelkelnenleklkkelnelvel 105
                  + v r +  e kl+ le++++                                 +e+e ++l++++e+ +++l+e++e+
  EPX70801.1  16 DEAVSRAEAAEAKLKELEHQMSV--------------------------------KEQEYESLSRKHEASESRLEEIEEE 63 
                 23333333333333333333333................................3333333333333333333332222 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00041
  V_ATPase_I  32 cdemerklrfleeeieklekavikeeea...eesleapeekeldeleeelekleeelkelnenleklkkelnelve 104
                 +++++rk+++leee+e ++k  + ++e+   ++ ++++ e+++++le+e ++le++l+ +++++ k+k+el e+++
  EPX70801.1  81 VEQLSRKIELLEEELETNDKLLRDTTEKmrqTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQ 156
                 6899*************88877776666665777778889999*************************99998765 PP

>> CALCOCO1  Calcium binding and coiled-coil domain (CALCOCO1) like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8  32.1     0.012       2.6      77     228 ..       3     157 ..       1     161 [] 0.86

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.012
    CALCOCO1  77 elesrveelkeelkesrekveeleekqkelerlseelaeeksalleakeesearirELEeDiktltqralekEteLeRlkerakkalaqrkeeeaer.. 173
                 +l+++++ +++e  e+    e  e+k kele+   +  +e + l++++e+se+r+ E+Ee++k l  +a +   +   + +  +k+  +  e e++   
  EPX70801.1   3 KLREKINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIKADDETGQKGEVEQLSRKIELLEEELETNDkl 101
                 6999*************************************************************9998776666666666666666666665555412 PP

    CALCOCO1 174 .kqlqakleqseeelrslskelqelrnslaerdtqvlqLqdtittltqkLttAqrk 228
                  ++   k++q++   +++ + +q+l   +++ + ++  + d+ ++++ +L++ ++ 
  EPX70801.1 102 lRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQA 157
                 2566789*********************************************9985 PP

>> DUF724  Protein of unknown function (DUF724)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7  12.3     0.054        12     106     176 ..       3      73 ..       1      81 [. 0.86
   2 ?    8.7   8.3    0.0064       1.4     104     182 ..      81     159 ..      77     161 .] 0.59

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.054
      DUF724 106 klleerkklekkieeeesekrkleeeidelekkilelerqlallkekkeaadkeiarlkseaekleeeled 176
                 kl+e+++++  ++ e+ s+ + +e++++ele++++  e++ ++l +k+ea+++++ +++ e+++l+ + +d
  EPX70801.1   3 KLREKINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIKADD 73 
                 77888888999999999999999999999999999999999999999999999999999999998776665 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0064
      DUF724 104 qtklleerkklekkieeeesekrkleeeidelekkilelerqlallkekkeaadkeiarlkseaekleeeledveqeFe 182
                  ++l ++++ le+++e++++  r   e++++++ k  ++er+ ++l +++++ ++++  +  + +k++ el++v+q  e
  EPX70801.1  81 VEQLSRKIELLEEELETNDKLLRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQALE 159
                 4555566666666666666666666666666666666666666666666666666666666666666666666665544 PP

>> DUF745  Protein of unknown function (DUF745)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   5.4      0.28        60     124     165 ..       5      46 ..       1      57 [. 0.78
   2 ?   11.4   2.9   0.00089       0.2      64     135 ..      88     159 ..      75     160 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.28
      DUF745 124 eqvaagaqqelaektqlleaAkkRveeLkkqlkearkdlekt 165
                 ++  + a +e +e  +  eaA+++++eL++q++   +++e+ 
  EPX70801.1   5 REKINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESL 46 
                 556677888888888889999999999999999999999975 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00089
      DUF745  64 veqleqelreaeavvqeekkslqsseanakaaakaakqaqqqlealkallkaakenlenaeqvaagaqqela 135
                 +e le+el+  ++ +++ +++++++  +a+  ++ +++ +++ + l++ l+ ++++++++++  +++ q l+
  EPX70801.1  88 IELLEEELETNDKLLRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQALE 159
                 567888999999999999999999999999999999999999999999999999999999888888888776 PP

>> BRE1  BRE1 E3 ubiquitin ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   9.5    0.0077       1.7       5      64 ..       1      60 [.       1      72 [. 0.90
   2 ?    5.5  10.7      0.08        18       2      80 ..      78     156 ..      77     161 .] 0.89

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0077
        BRE1  5 LvklekafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdalenelkkL 64
                ++kl + ++++++++++ v+  ++ e k++ le +++  +q+y ++ r+ +a e  l  +
  EPX70801.1  1 MDKLREKINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEI 60
                57899999*****************************************99988776655 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.08
        BRE1   2 qkELvklekafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdalenelkkLnkllsKsselieqLke 80 
                 + E+++l++ +e l+e+l++  k l + +ek+ +++++ +  ++   ++++++d+le++l  ++ +++K +   ++ ++
  EPX70801.1  78 KGEVEQLSRKIELLEEELETNDKLLRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQ 156
                 6799*****************************************************9999999998888877777776 PP

>> IFT57  Intra-flagellar transport protein 57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2  15.0       1.8   3.9e+02     244     332 ..      12     106 ..       2     113 .. 0.43
   2 ?    7.4  10.5    0.0082       1.8     228     323 ..      63     160 ..      62     161 .] 0.73

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 1.8
       IFT57 244 ksqlkklhedisktlekiesrEkyl...nsqleellqeyreaqeelsevkekykqlsegvse...ltrelaeiseelekvkqemeergssmtDgs 332
                 + + ++  +  + +  k+++ E ++   ++++e+l +++++ + +l+e++e++k+l  +  +   ++ e +++s ++e +++e+e   + + D++
  EPX70801.1  12 RAETDEAVSRAEAAEAKLKELEHQMsvkEQEYESLSRKHEASESRLEEIEEEMKDLRIKADDetgQKGEVEQLSRKIELLEEELETNDKLLRDTT 106
                 33333333333333333333333333334555555555555555555555555555443333000333444555555555555555555555555 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0082
       IFT57 228 qmkkhkksieeslpetksqlkklhedisktlekiesrEkylnsqleellqe...yreaqeelsevkekykqlsegvseltrelaeiseelekvkqemee 323
                 +mk+++ + ++++ + k ++++l+++i+   e++e+ +k l    e++ q     ++ ++++++++ + ++l+++++ +t+++a+i+ el++v q +e+
  EPX70801.1  63 EMKDLRIKADDETGQ-KGEVEQLSRKIELLEEELETNDKLLRDTTEKMRQTdvkAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQALED 160
                 677777777777777.88899999999999999999999997777777665322455567777777777777778888888888888888888777765 PP

>> Seryl_tRNA_N  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   4.0      0.28        62      67      97 ..       6      36 ..       1      42 [. 0.77
   2 ?    5.0   9.3      0.13        27      36     100 ..      41     105 ..      38     112 .. 0.87
   3 ?    7.4   1.9     0.024       5.2      68     104 ..     122     158 ..     104     161 .] 0.57

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.28
                  S-TCCCCCCCHHHHHHHHHHHHHHHHHHHHH CS
  Seryl_tRNA_N 67 edaeeliaevkelkeelkaleaelkeleael 97
                  e++++ +ae++e   + +a+ea+lkele ++
    EPX70801.1  6 EKINAARAETDEAVSRAEAAEAKLKELEHQM 36
                  6788888888888888888899988888887 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.13
                   HHHHHHHHHHHHHHHHHHHHHHHCCCCCCTTS-TCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH CS
  Seryl_tRNA_N  36 ekrrelqveleelqaerNelskeIgkakkkkedaeeliaevkelkeelkaleaelkeleaelekl 100
                   ++ ++l  + e+  ++  e+ +e++ +  k +d +  + ev++l+ +++ le+el++ ++ l + 
    EPX70801.1  41 QEYESLSRKHEASESRLEEIEEEMKDLRIKADDETGQKGEVEQLSRKIELLEEELETNDKLLRDT 105
                   67778888889999999999999999999999999********************9999888765 PP

  == domain 3  score: 7.4 bits;  conditional E-value: 0.024
                   -TCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCTS CS
  Seryl_tRNA_N  68 daeeliaevkelkeelkaleaelkeleaeleklllai 104
                     ++l +e ++l ++l+ ++++ ++++ael+++ +a+
    EPX70801.1 122 RVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQAL 158
                   4455555566666666666666666666666555544 PP

>> Fzo_mitofusin  fzo-like conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   4.8      0.03       6.6      78     146 ..       2      72 ..       1      78 [. 0.86
   2 ?    7.2   4.5     0.016       3.4      98     159 ..      83     144 ..      77     146 .. 0.53

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.03
  Fzo_mitofusin  78 ekLrlivsltsancshqvqq..elsstfarlcqqvdetekeleeeikelekeiekleevqkkakllrnkas 146
                    +kLr  +++  a+ ++ v +    +  +++l++q    e+e e+  ++ e++ ++lee+++++k lr ka 
     EPX70801.1   2 DKLREKINAARAETDEAVSRaeAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIKAD 72 
                    578888888888888888774235567899*************************************9996 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.016
  Fzo_mitofusin  98 elsstfarlcqqvdetekeleeeikelekeiekleevqkkakllrnkaslleseLekfeeqy 159
                    +ls  ++ l+++ ++++k l++ +++++++  k e+ +++ + l ++   le++Le  +++y
     EPX70801.1  83 QLSRKIELLEEELETNDKLLRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKY 144
                    34444455555555555555555555555555555555555555566666666666555555 PP

>> DUF5082  Domain of unknown function (DUF5082)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   7.0     0.066        14       1      52 [.       4      55 ..       4      77 .. 0.70
   2 ?    7.2   5.9     0.028         6      16      95 ..      78     160 ..      75     161 .] 0.69

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.066
     DUF5082  1 lktkisklqaqiaelrseiaaleekIerLkeaktklsdekeslkqkkkklek 52
                l++ki++++a+ +e+ s+++a e k+++L+   +  ++e esl+ k +++e 
  EPX70801.1  4 LREKINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASES 55
                6789**************************5555545555555544443333 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.028
     DUF5082  16 rseiaaleekIerLkeaktklsdekeslkqkkkklekplnsse.......sWkGkeennydgirsnlessyqtyvdkldelidaiee 95 
                 ++e+++l+ kIe L+e   +l++ ++ l ++ +k+++++++ e       s+   e+++ +++++ + ++y +++ +lde+ +a+e+
  EPX70801.1  78 KGEVEQLSRKIELLEE---ELETNDKLLRDTTEKMRQTDVKAEhferrvqSLE-HERDDLEQKLEGMTDKYAKIKAELDEVHQALED 160
                 6899999999999984...5666666666666666666666663322221443.355666666779999999999999999999985 PP

>> DUF4201  Domain of unknown function (DUF4201)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3  14.6     0.016       3.5      81     176 ..       3      96 ..       1      97 [. 0.93
   2 ?    6.9  10.5     0.022       4.7      44     121 ..      81     158 ..      77     161 .] 0.77

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.016
     DUF4201  81 hlkeklhmleselselkkelkekeerlaklrkelykvklerdklrkqneklkqqggllrvPaLlkDYdktkekveekrksvkkLrrkvkilemrlk 176
                  l+ek ++ ++e  e+ ++ +  e++l++l+++++  ++e + l +++e  ++++++++ +  +kD   + ++    + +v++L rk++ le+ l+
  EPX70801.1   3 KLREKINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEE--MKDLRIKADDETGQKGEVEQLSRKIELLEEELE 96 
                 79******************************************************96555..9***************************99875 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.022
     DUF4201  44 FeqlqienqalnkkIeernkeLkrlkkkttktvhalthlkeklhmleselselkkelkekeerlaklrkelykvkler 121
                  eql ++++ l++++e  +k L    +k+ +t  + +h   + + le+e  +l+++l+ ++++ ak+++el +v++  
  EPX70801.1  81 VEQLSRKIELLEEELETNDKLLRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQAL 158
                 578888888888888888888888888888888888888888888888888888888888888888888888887764 PP

>> TMPIT  TMPIT-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   6.8      0.18        39      28      89 ..       4      64 ..       1      77 [. 0.48
   2 ?    9.3   6.7    0.0027      0.59       9      89 ..      79     158 ..      71     161 .] 0.70

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.18
       TMPIT 28 lsklqskcskeikkqkkrlkelksslkklkksvkeeeeeeveelkeelkerkkvlkevesll 89
                l + +++ + e+++   r+++ +++lk+l++++ + +e+e+e+l+++ +  ++ l+e+e+ +
  EPX70801.1  4 LREKINAARAETDEAVSRAEAAEAKLKELEHQM-SVKEQEYESLSRKHEASESRLEEIEEEM 64
                334444444444444555555555555555543.3444444555555554444444444432 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.0027
       TMPIT   9 kefkeleetakeykqkleelsklqskcskeikkqkkrlkelksslkklkksvkeeeeeeveelkeelkerkkvlkevesll 89 
                  e+++l+ + + ++++le+  kl  ++++++++   +++++++++++l+++  ++ e+++e ++++ +++k+ l+ev++ l
  EPX70801.1  79 GEVEQLSRKIELLEEELETNDKLLRDTTEKMRQTDVKAEHFERRVQSLEHER-DDLEQKLEGMTDKYAKIKAELDEVHQAL 158
                 5677777777777777777777777777777777777777777777777764.5666677777777777777777777665 PP

>> ERM  Ezrin/radixin/moesin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5  18.6      0.12        27      36     100 ..       2      66 ..       1      78 [. 0.78
   2 ?    7.2  12.6     0.018       3.9       8      84 ..      82     158 ..      78     161 .] 0.83

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.12
         ERM  36 elLaekarraeeeaelLeqkaaeaeeeiqrlkesaekeeeekeklerklreaeleaarleeeser 100
                 ++L ek   a+ e ++   +a++ae++ ++l+++ + +e+e e+l rk ++ e++++++eee++ 
  EPX70801.1   2 DKLREKINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKD 66 
                 57888888888888888888888888888888888888888888888888888888888888764 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.018
         ERM   8 releerLkqlqeeaekaqeaLreseetaelLaekarraeeeaelLeqkaaeaeeeiqrlkesaekeeeekeklerkl 84 
                 ++l ++++ l+ee e + + Lr+ +e++++ + ka+  e+  + Le+++ ++e++ + +  + +k ++e +++ + l
  EPX70801.1  82 EQLSRKIELLEEELETNDKLLRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQAL 158
                 67888889999999999999999999999999999999999999999999999999999988888888888777665 PP

>> JIP_LZII  JNK-interacting protein  leucine zipper II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.5      0.31        69      36      70 ..       2      36 ..       1      37 [. 0.84
   2 ?    7.8   8.0     0.017       3.7      33      71 .]      27      65 ..      26      65 .. 0.96
   3 ?    4.0   4.5      0.25        55      34      67 ..      80     113 ..      79     117 .. 0.90
   4 ?    7.9   1.1     0.016       3.4      34      69 ..     122     157 ..     113     159 .. 0.68

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.31
    JIP_LZII 36 deLtsereiLreEleslqkakerlesrikelEeel 70
                d+L +  ++ r E ++  +  e+ e ++kelE+++
  EPX70801.1  2 DKLREKINAARAETDEAVSRAEAAEAKLKELEHQM 36
                67777788889999999999999999999999986 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.017
    JIP_LZII 33 arvdeLtsereiLreEleslqkakerlesrikelEeelk 71
                a++ eL  + ++ ++E esl   +e+ esr++e+Eee+k
  EPX70801.1 27 AKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMK 65
                6899*********************************98 PP

  == domain 3  score: 4.0 bits;  conditional E-value: 0.25
    JIP_LZII  34 rvdeLtsereiLreEleslqkakerlesrikelE 67 
                 +v++L+   e L+eEle+  k ++   +++++++
  EPX70801.1  80 EVEQLSRKIELLEEELETNDKLLRDTTEKMRQTD 113
                 69*****************999999999998765 PP

  == domain 4  score: 7.9 bits;  conditional E-value: 0.016
    JIP_LZII  34 rvdeLtsereiLreEleslqkakerlesrikelEee 69 
                 rv  L  er+ L++ le +++  ++++ ++ e+ + 
  EPX70801.1 122 RVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQA 157
                 677777777777777777777777777777776665 PP

>> FUSC  Fusaric acid resistance protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9  10.0     0.035       7.8     201     329 ..       2     131 ..       1     160 [. 0.70

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.035
        FUSC 201 ealrsqaayesprirararalrrllsrmlallallsslarllarlraeeaaavpelaallaelaal.eaaaaaealeaalaalrarlralrrale.... 294
                 ++lr+   +  +++ +++ ++ ++ +++ +l  ++s  +++ + l+++++a++  l+++ +e+++l  +a+++ ++++++++l ++++ l+++le    
  EPX70801.1   2 DKLREKINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLrIKADDETGQKGEVEQLSRKIELLEEELEtndk 100
                 566666677777777799999999999999999999999999999999999988899999999999978899999999999999999999999995555 PP

        FUSC 295 ......adadtaalllarlaellaelaqllaslraleaaia 329
                       +           ++++  ++ +  + +++le+++ 
  EPX70801.1 101 llrdttE----------KMRQTDVKAEHFERRVQSLEHERD 131
                 4433331..........222222233333333333333333 PP

>> HemX  HemX, putative uroporphyrinogen-III C-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   6.2      0.06        13      39      99 ..       7      67 ..       1      75 [. 0.64
   2 ?    6.8   5.5     0.017       3.6      36     100 ..      80     141 ..      68     161 .] 0.51

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.06
        HemX 39 elqqqlaaleqqlaqveaekeqkqeleerlqqlaeklealekeleqlqkqleelqqqlskv 99
                +++ + a+ +++++++ea +++ +ele+++  ++++ e+l+++ e+ +++lee++++++++
  EPX70801.1  7 KINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDL 67
                3444444455555556777777777777777777777777777777777777777777665 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.017
        HemX  36 evaelqqqlaaleqqlaqveaekeqkqeleerlqqlaeklealekeleqlqkqleelqqqlskvs 100
                 ev++l+ +++ le++l++   +++   +++e+++q++ k e+ e+++++l+++ + l+q+l+ + 
  EPX70801.1  80 EVEQLSRKIELLEEELET---NDKLLRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMT 141
                 344555555555555554...44444444555555555555555555555555555555555443 PP

>> Prefoldin_2  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   4.0      0.04       8.7      69      99 ..      20      50 ..       2      53 .. 0.87
   2 ?    4.8   3.9      0.12        27      69      98 ..      41      70 ..      40      78 .. 0.72
   3 ?    3.4   4.4      0.34        74      64      94 ..      81     111 ..      74     119 .. 0.77
   4 ?    9.8   1.8    0.0034      0.74      65      99 ..     124     158 ..     112     161 .] 0.66

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.04
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Prefoldin_2 69 erketlekeiktlekqleklekeleelkeel 99
                  r+e +e+++k+le q++ +e+e+e l  ++
   EPX70801.1 20 SRAEAAEAKLKELEHQMSVKEQEYESLSRKH 50
                 58999*******************9998776 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.12
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Prefoldin_2 69 erketlekeiktlekqleklekeleelkee 98
                 ++ e+l+ + ++ e++le++e+e+++l+ +
   EPX70801.1 41 QEYESLSRKHEASESRLEEIEEEMKDLRIK 70
                 556777777888888888888888887755 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.34
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Prefoldin_2  64 keeLeerketlekeiktlekqleklekelee 94 
                   e+L  ++e le+e++t  k l++  +++++
   EPX70801.1  81 VEQLSRKIELLEEELETNDKLLRDTTEKMRQ 111
                  4788888888888888888888888888876 PP

  == domain 4  score: 9.8 bits;  conditional E-value: 0.0034
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Prefoldin_2  65 eeLeerketlekeiktlekqleklekeleelkeel 99 
                  + Le + ++le++++ +++++ k+++el+e+ + l
   EPX70801.1 124 QSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQAL 158
                  45666666677777777777777777776666655 PP

>> DUF2730  Protein of unknown function (DUF2730)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   7.8      0.64   1.4e+02      43      96 ..      30      91 ..       4      98 .. 0.53
   2 ?    7.2   1.9     0.024       5.3      37      88 ..     111     160 ..     101     161 .] 0.73

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.64
     DUF2730 43 eendkrlteletkvenLP.....takdlekLkllladlrgelka...leaevrqlshqvdLL 96
                +e +++++  e++ e+L      +++ le+++ +++dlr + ++    + ev+qls++++LL
  EPX70801.1 30 KELEHQMSVKEQEYESLSrkheaSESRLEEIEEEMKDLRIKADDetgQKGEVEQLSRKIELL 91
                44444444444444555411111334466666666666554433111233566666666654 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.024
     DUF2730  37 klaekveendkrlteletkvenLPtakdlekLkllladlrgelkaleaevrq 88 
                 +   k+e+ ++r+++le + ++L  ++ le +  + a++++el+++++ ++ 
  EPX70801.1 111 QTDVKAEHFERRVQSLEHERDDL--EQKLEGMTDKYAKIKAELDEVHQALED 160
                 33346778888888888888888..677888888888888888888887765 PP

>> SlyX  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       9.9   2.2e+03      41      56 ..       2      17 ..       1      26 [. 0.49
   2 ?    8.4   3.7     0.015       3.3       2      46 ..      26      70 ..      20      79 .. 0.60
   3 ?    6.2   0.9     0.072        16      28      52 ..      76     100 ..      74     118 .. 0.73
   4 ?    2.4   3.3       1.1   2.4e+02       3      36 ..     121     154 ..      95     161 .] 0.55

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 9.9
                HHHHHT-XXXXXXXXX CS
        SlyX 41 rllaerlkeleessga 56
                ++l+e+++++++++ +
  EPX70801.1  2 DKLREKINAARAETDE 17
                4555555555444433 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.015
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT CS
        SlyX  2 eerleeLEiklafqedtieeLndvvaeqqqqidrlqrqlrllaer 46
                e++l+eLE +++  e+  e+L++   + + ++++++++++ l+ +
  EPX70801.1 26 EAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIK 70
                455566666666666666666666666666666666666655544 PP

  == domain 3  score: 6.2 bits;  conditional E-value: 0.072
                 HHHHHHHHHHHHHHHHHHT-XXXXX CS
        SlyX  28 eqqqqidrlqrqlrllaerlkelee 52 
                  q  ++++l r+++ll+e+l++ ++
  EPX70801.1  76 GQKGEVEQLSRKIELLEEELETNDK 100
                 5788899999999999999865544 PP

  == domain 4  score: 2.4 bits;  conditional E-value: 1.1
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        SlyX   3 erleeLEiklafqedtieeLndvvaeqqqqidrl 36 
                  r++ LE +   +e+ +e + d  a+   ++d+ 
  EPX70801.1 121 RRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEV 154
                 3344444444444444444444444444444444 PP

>> DUF16  Protein of unknown function DUF16
   [No individual domains that satisfy reporting thresholds (although complete target did)]

>> AAA_13  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1  10.7     0.065        14     389     457 ..       5      75 ..       1      84 [. 0.76

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.065
      AAA_13 389 eeekeeakkklelhl..veeleseldeykkkykklekaieklekelkeeeaelkkleeeikeLekqlrdek 457
                  e+ ++a+ +    +  +e +e++l+e++++++  e++ e+l ++ +++e++l+++eee+k+L+ +  de+
  EPX70801.1   5 REKINAARAETDEAVsrAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIKADDET 75 
                 455555554444433215777889999999***99***************************998877765 PP

>> DUF2009  Protein of unknown function (DUF2009)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   5.0     0.034       7.4     155     234 ..      16      98 ..       3     101 .. 0.76
   2 ?    5.7   2.6     0.031       6.7     134     203 ..      89     158 ..      77     161 .] 0.50

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.034
     DUF2009 155 elataeisaekksreeiqkeikekeeaieklakkysskklskeeieqvlysie...dnnafleanrepvekllkllekffepe 234
                 + a+++ +a + + +e+++++  ke+  e+l++k++ ++ + eeie+ ++ ++   d ++  + ++e +++ ++lle++ e +
  EPX70801.1  16 DEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRikaDDETGQKGEVEQLSRKIELLEEELETN 98 
                 5577777777778889*****************************99988875222666666666666777777777666554 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.031
     DUF2009 134 ktvesvleekealelledklielataeisaekksr..eeiqkeikekeeaieklakkysskklskeeieqvl 203
                 + +e+ le+++  +ll+d++ ++  ++++ae+ +r  +++++e  + e+ +e +++ky++ k++ +e++q+l
  EPX70801.1  89 ELLEEELETND--KLLRDTTEKMRQTDVKAEHFERrvQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQAL 158
                 33333333333..34666555555555554443331134445555555566666666666666666666655 PP

>> HAUS-augmin3  HAUS augmin-like complex subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7  11.5     0.091        20      76     150 ..       4      78 ..       1      86 [. 0.75
   2 ?    7.1   9.0     0.017       3.7      65     150 ..      73     158 ..      68     161 .] 0.79

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.091
  HAUS-augmin3  76 eeesleaLeqelqeLqkekalklkrlnkLqvqaaslqqelrkleeeekeakkklkeaqeelraenaetnavLqql 150
                   ++e+++a ++e +e+ +  +  + +l++L+ q++  +qe ++l++++++ + +l+e++ee++    +++ +  q 
    EPX70801.1   4 LREKINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIKADDETGQK 78 
                   567777888888888888888888888888888888888888888888888888888888888777777665555 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.017
  HAUS-augmin3  65 dvellevileeeeesleaLeqelqeLqkekalklkrlnkLqvqaaslqqelrkleeeekeakkklkeaqeelraenaetnavLqql 150
                   d++  + ++e++  ++e Le+el++  k  +  ++++ + +v a   +++ ++le e +  ++kl+   ++ ++  ae+++v q l
    EPX70801.1  73 DETGQKGEVEQLSRKIELLEEELETNDKLLRDTTEKMRQTDVKAEHFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQAL 158
                   55556667888888888999999999999999999999999999999999999999999888888888888888888887777766 PP

>> Exonuc_VII_L  Exonuclease VII, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1  18.2      0.13        28     148     249 ..      21     133 ..       1     161 [] 0.35

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.13
  Exonuc_VII_L 148 qleelerrlekaikrlleekkqrleklasrlkspeellerkrqrldeleerleralkkq..lkkkrerleelkerl.k.........ekleekkerl 232
                   + e++e++l+ +++++++ k+q+ e+l+++ + +e++le+ ++++++l+ + + ++ ++  +++ ++++e l+e+l +         ek+++++ + 
    EPX70801.1  21 RAEAAEAKLK-ELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIKADDETGQKgeVEQLSRKIELLEEELeTndkllrdttEKMRQTDVKA 116
                   2222222222.22333333444444444444333344444444444433333332222233444444444444444223322222221111111111 PP

  Exonuc_VII_L 233 kklkerlelleekkerl 249
                   ++ ++r+++le+++++l
    EPX70801.1 117 EHFERRVQSLEHERDDL 133
                   22222222222222222 PP

>> DUF5320  Family of unknown function (DUF5320)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   4.4      0.36        78      63      99 .]      31      67 ..       5      67 .. 0.83
   2 ?    6.7   1.0      0.07        15      66      96 ..      72     102 ..      68     105 .. 0.86
   3 ?    6.4   0.9     0.084        18      63      98 ..     118     153 ..     100     160 .. 0.67

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.36
     DUF5320 63 aaetaeaskeeekelLeeqaeaLeeeleaikkrlkel 99
                + e++ + ke+e e L ++ ea e++le+i++++k+l
  EPX70801.1 31 ELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDL 67
                5567888899999******************999876 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.07
     DUF5320  66 taeaskeeekelLeeqaeaLeeeleaikkrl 96 
                  +e+ ++ e e L +++e+Leeele+ +k l
  EPX70801.1  72 DDETGQKGEVEQLSRKIELLEEELETNDKLL 102
                 57889999*****************988876 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.084
     DUF5320  63 aaetaeaskeeekelLeeqaeaLeeeleaikkrlke 98 
                   e + +s e e++ Le++ e + ++ ++ik++l+e
  EPX70801.1 118 HFERRVQSLEHERDDLEQKLEGMTDKYAKIKAELDE 153
                 345556666777777777777777777777777765 PP

>> HIP1_clath_bdg  Clathrin-binding domain of Huntingtin-interacting protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   2.4      0.34        74      54      99 .]       1      46 [.       1      46 [. 0.79
   2 ?    7.4  19.6      0.03       6.5      10      99 .]      31     133 ..      27     133 .. 0.66
   3 ?    5.5   3.5      0.12        25      19      69 ..     108     159 ..     105     161 .] 0.65

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.34
  HIP1_clath_bdg 54 lekLkreleakraelarlkssLesseqsgeqlssqlaaLqaEkesL 99
                    ++kL++ ++a rae +++ s  e  e + ++l+ q++  ++E esL
      EPX70801.1  1 MDKLREKINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESL 46
                    6788888888888888888888888888888888888888887766 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.03
  HIP1_clath_bdg  10 evtkqlsvarqaqeeverekkeleeelerlkeeaer.kle.....eqkeelekLkreleakraelar.......lkssLesseqsgeqlssqlaa 91 
                     e+  q+sv  q+ e++ r+ +  e +le+++ee +  +++      qk e+e+L r +e  ++el++         + ++++  + e+ + ++++
      EPX70801.1  31 ELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDlRIKaddetGQKGEVEQLSRKIELLEEELETndkllrdTTEKMRQTDVKAEHFERRVQS 125
                     67789***********9999988888888887754313334455567777777766655555555551111000555555566667788999*** PP

  HIP1_clath_bdg  92 LqaEkesL 99 
                     L++E++ L
      EPX70801.1 126 LEHERDDL 133
                     *****987 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.12
  HIP1_clath_bdg  19 rqaqeeverekke.leeelerlkeeaerkleeqkeelekLkreleakraela 69 
                     +  q +v++e  e   ++le+ +++ e+kle  + +  k+k+el + ++ l+
      EPX70801.1 108 KMRQTDVKAEHFErRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQALE 159
                     5566676666533134567777777788888888888888888877776665 PP

>> Occludin_ELL  Occludin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   7.5      0.39        85      35      92 ..      33      91 ..       1     100 [. 0.56
   2 ?    4.9   5.4       0.2        44      26      96 ..     104     151 ..      77     161 .] 0.42

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.39
  Occludin_ELL 35 skkfseLerelkelkegskeykkieeeilqeykklkk.dpeyqekkkrceyLkekLshi 92
                  ++++s  e+e ++l+++++  +++ eei +e k+l+    +   +k ++e+L++k + +
    EPX70801.1 33 EHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIkADDETGQKGEVEQLSRKIELL 91
                  33333333444444444445555555555555555432333344455555555555554 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.2
  Occludin_ELL  26 elhaeleevskkfseLerelkelkegskeykkieeeilqeykklkkdpeyqekkkrceyLkekLshiKkli 96 
                   +  ++++++  k +++er++++l+++++                         ++++e + +k + iK+ +
    EPX70801.1 104 DTTEKMRQTDVKAEHFERRVQSLEHERDDL-----------------------EQKLEGMTDKYAKIKAEL 151
                   222333333333333333333333333333.......................344444444444444433 PP

>> Atg14  Vacuolar sorting 38 and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5  12.9      0.14        31      27      99 ..       4      73 ..       1      98 [. 0.66
   2 ?    4.3  15.7      0.08        17      29     152 ..      41     156 ..      39     161 .] 0.69

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.14
       Atg14 27 lrerlaklksekeslkkkiekalegkeeaeqledkiknkkakleelksliadlrerlqelkdklsqlkkeiee 99
                lre++   ++e ++  ++ e+a+++ +   +le +   k +  e+l  +++ +++rl+e+++ ++ l+ + ++
  EPX70801.1  4 LREKINAARAETDEAVSRAEAAEAKLK---ELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIKADD 73
                566677777777777777777777666...7888888888888888888888888888888888877766554 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.08
       Atg14  29 erlaklksekeslkkkiekalegkeeaeqledkiknkkakleelksliadlrerlqelkdklsqlkkeieekkkklaklsdklk..kRrsdleslqnel 125
                 +++ +l  ++e+ ++++e+++e+ +       +++ k+++   +k ++++l++++++l++ l++++k ++++ +k+++ + k    +  ++ +sl+ e 
  EPX70801.1  41 QEYESLSRKHEASESRLEEIEEEMK-------DLRIKADDETGQKGEVEQLSRKIELLEEELETNDKLLRDTTEKMRQTDVKAEhfE--RRVQSLEHER 130
                 4555566666666666666666666.......9999999999999999999999999999999999999999999999988877552..3333555554 PP

       Atg14 126 eerrkkqiaklqdaikrieqklsslss 152
                    ++k +++++d++ +i+  l+++++
  EPX70801.1 131 DDLEQK-LEGMTDKYAKIKAELDEVHQ 156
                 444443.55666666677776666665 PP

>> CorA  CorA-like Mg2+ transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2  15.2       0.1        22      89     225 ..      20     147 ..      10     161 .] 0.62

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.1
        CorA  89 ealdevikrlkdeggkpkspgellyrlldeivdrlfellekleeeldeledel.edstkkeilrelaqlrrrlvklrralapnrevlkrllakaddkll 186
                  +++++ ++lk e +++ s++e  y+ l +  +  +  le++eee+++l     ++  +k++   + ql r++  l++ l +n ++l +  +k ++  +
  EPX70801.1  20 SRAEAAEAKLK-ELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKDLRIKAdDETGQKGE---VEQLSRKIELLEEELETNDKLLRDTTEKMRQTDV 114
                 44566666677.77999999999999999999999999999999999999999633334444...4444446777777777777777555552222222 PP

        CorA 187 ddedkeylrdlldelerllemlealrerleslqdtyssl 225
                 +       ++ + ++++l+ + + l ++le + d y+ +
  EPX70801.1 115 K------AEHFERRVQSLEHERDDLEQKLEGMTDKYAKI 147
                 2......33344444444445555555555555555433 PP

>> OmpH  Outer membrane protein (OmpH-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5  12.7      0.19        42       7      80 ..       1      75 [.       1      84 [. 0.77
   2 ?    6.7   9.4      0.04       8.7      21     101 ..      81     157 ..      73     161 .] 0.39

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.19
                HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS..-HHHHHHHHHHHHHHHHHHHHHH CS
        OmpH  7 vqkileespegkaaqeqlekkfkklqaeleakekelqklqeelqkkakkl.ekeekeqelqkkeqelqqkqqqka 80
                ++k+ e+ ++++a  ++  + +++ +a+l+++e ++  +++e++  ++k  ++e + +e+++++++l+ k++ + 
  EPX70801.1  1 MDKLREKINAARAETDEAVSRAEAAEAKLKELEHQMSVKEQEYESLSRKHeASESRLEEIEEEMKDLRIKADDET 75
                567778888888888888888899999999999999999999986666665588888889999999988555544 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.04
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS.-HHHHHH..HHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHHHHHH CS
        OmpH  21 qeqlekkfkklqaeleakekelqklqeelqkkakklekeekeqe..lqkkeqelqqkqqqkaqelqkkqqe...llkpildkinka 101
                  eql +k++ l++ele+  k l++  e++         +++ ++  +++++q l+ +++  +q+l+    +   + ++ ld++++a
  EPX70801.1  81 VEQLSRKIELLEEELETNDKLLRDTTEKMR--------QTDVKAehFERRVQSLEHERDDLEQKLEGMTDKyakIKAE-LDEVHQA 157
                 334444444444444444444444444443........2222222355555555553333333333333220002222.4444444 PP

>> DUF4446  Protein of unknown function (DUF4446)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   4.1     0.076        17      37      77 ..      26      66 ..       5      72 .. 0.85
   2 ?    2.1   1.1      0.82   1.8e+02      46      78 ..      80     112 ..      68     118 .. 0.68
   3 ?    7.9   0.8     0.013       2.9      23      70 ..     115     160 ..     111     161 .] 0.82

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.076
     DUF4446 37 gkdgksleellkekleeveelkeeseelekeieeleeklkk 77
                +++ k+le++++ k +e+e+l++++e+ e+++ee+ee++k 
  EPX70801.1 26 EAKLKELEHQMSVKEQEYESLSRKHEASESRLEEIEEEMKD 66
                4577999******************************9986 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.82
     DUF4446  46 llkekleeveelkeeseelekeieeleeklkks 78 
                  +++  +++e l+ee e+++k +++ +ek++++
  EPX70801.1  80 EVEQLSRKIELLEEELETNDKLLRDTTEKMRQT 112
                 455666677777777777777777777777665 PP

  == domain 3  score: 7.9 bits;  conditional E-value: 0.013
     DUF4446  23 klkklkkkykklmkgkdgksleellkekleeveelkeeseelekeiee 70 
                 k +++++++++l +  ++++le++l+  ++++ ++k+e +e+++ +e+
  EPX70801.1 115 KAEHFERRVQSLEH--ERDDLEQKLEGMTDKYAKIKAELDEVHQALED 160
                 66777888888865..78899999999999999999999999998876 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3  21.2      0.21        45     110     235 ..       6     153 ..       1     161 [] 0.39

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.21
     DUF4407 110 aelaeeqqeeakelkeqlaaaltaelaeleaqiaalqaeidaaearldalraeaqkeldgtk......gtgttgvaGkgpaakekkaqldaaqaelael 202
                 +++++ ++e+ +++++   +a++a+l+ele q +  ++e+++++++ +a +  ++ e++ +        + +tg +G+ +   +k + l++  ++ ++l
  EPX70801.1   6 EKINAARAETDEAVSRA--EAAEAKLKELEHQMSVKEQEYESLSRKHEASESRLE-EIEEEMkdlrikADDETGQKGEVEQLSRKIELLEEELETNDKL 101
                 33333333333333222..225566666666666555555555554444444444.2222222444432232333344333333333333222222222 PP

     DUF4407 203 kakld......................atarlaalraelaeleaerakeraasqa 235
                     +                       ++++++l+++l+++++++ak++a+ ++
  EPX70801.1 102 L---RdttekmrqtdvkaehferrvqsLEHERDDLEQKLEGMTDKYAKIKAELDE 153
                 2...132233335444444444444444444444444444444444444444444 PP

>> Rho_Binding  Rho Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4  10.6       5.5   1.2e+03       1      39 [.      32      67 ..       1      78 [. 0.76
   2 ?    4.2   4.2      0.34        75       9      48 ..      78     115 ..      71     120 .. 0.78
   3 ?   11.6   1.3    0.0017      0.38       3      38 ..     121     156 ..     119     160 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 5.5
  Rho_Binding  1 Ltkdvenlakekeelnkklkkleeelekakeeeeeiekl 39
                 L+ ++  +++e e l++k++  e++le+ +   ee++ l
   EPX70801.1 32 LEHQMSVKEQEYESLSRKHEASESRLEEIE---EEMKDL 67
                 566777777777777777777777777765...444444 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.34
  Rho_Binding   9 akekeelnkklkkleeelekake.eeeeieklkasyekqLk 48 
                  + e e+l++k++ leeele++ +   + +ek++   ++ +k
   EPX70801.1  78 KGEVEQLSRKIELLEEELETNDKlLRDTTEKMR---QTDVK 115
                  56899*************999844778888888...44444 PP

  == domain 3  score: 11.6 bits;  conditional E-value: 0.0017
  Rho_Binding   3 kdvenlakekeelnkklkkleeelekakeeeeeiek 38 
                   +v+ l+ e+++l++kl+ + ++++k k+e +e+++
   EPX70801.1 121 RRVQSLEHERDDLEQKLEGMTDKYAKIKAELDEVHQ 156
                  67999***********************76666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3136  (0.174912); expected 358.6 (0.02)
Passed bias filter:                      851  (0.047465); expected 358.6 (0.02)
Passed Vit filter:                       231  (0.0128842); expected 17.9 (0.001)
Passed Fwd filter:                       146  (0.00814323); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              82  [number of targets reported over threshold]
# CPU time: 1.43u 0.40s 00:00:01.83 Elapsed: 00:00:00.64
# Mc/sec: 756.00
//
Query:       EPX70802.1  [L=1718]
Description: actin cortical patch component, with EF hand and WH2 domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      2e-30  105.0 390.6    2.4e-06   27.9  38.1   14.3  7  DUF1720       Domain of unknown function (DUF1720)
    7.8e-26   90.0   0.0    3.5e-14   52.6   0.0    2.5  2  EF-hand_4     Cytoskeletal-regulatory complex EF hand
    6.2e-06   25.9   0.2    1.3e-05   24.9   0.2    1.6  1  WH2           WH2 motif
    0.00041   20.7   0.1     0.0036   17.7   0.1    2.2  2  EF-hand_7     EF-hand domain pair
     0.0064   16.3   0.0        2.3    8.4   0.0    2.8  3  EF-hand_6     EF-hand domain
  ------ inclusion threshold ------
      0.055   13.4  10.9      0.027   14.4   3.8    2.4  2  Prefoldin_2   Prefoldin subunit
        0.1   10.5   7.4       0.16    9.9   7.4    1.2  1  Prominin      Prominin
       0.37   10.8  13.7       0.21   11.6   7.7    2.6  2  Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C
       0.45    9.8   7.4        1.5    8.1   7.0    1.9  2  DUF4407       Domain of unknown function (DUF4407)
        2.5    8.5   4.4        3.3    8.1   0.2    2.9  2  CLZ           C-terminal leucine zipper domain of cyclic nucl
        6.5    7.2   9.3         10    6.6   1.3    3.6  3  FlaC_arch     Flagella accessory protein C (FlaC)


Domain annotation for each model (and alignments):
>> DUF1720  Domain of unknown function (DUF1720)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3  34.5   9.2e-09   1.5e-05       3      74 ..      96     171 ..      80     172 .. 0.92
   2 !   14.7  28.8   1.9e-05     0.031       1      62 [.     132     186 ..     132     194 .. 0.74
   3 !   12.7  45.5   7.8e-05      0.13       3      75 .]     159     261 ..     157     261 .. 0.68
   4 !   20.0  21.7   4.3e-07    0.0007      20      74 ..     245     294 ..     239     299 .. 0.83
   5 !   18.4  32.5   1.4e-06    0.0022       2      74 ..     418     481 ..     415     482 .. 0.76
   6 !   27.9  38.1   1.5e-09   2.4e-06       1      74 [.     679     742 ..     679     772 .. 0.92
   7 ?   -1.0   0.8       1.5   2.5e+03      16      33 ..    1501    1519 ..    1481    1539 .. 0.57

  Alignments for each domain:
  == domain 1  score: 25.3 bits;  conditional E-value: 9.2e-09
     DUF1720   3 pqqtGfqppqqqqpqqqqplqpqpTGfmpqqqtgqglqpqpTGggqfap...glqpqqTGf.qeqaqqglqPqaTG 74 
                  q tG++ ++++++++++ +qpq+TG  p ++ g  +qpq+TG ++f p    +qpqqTG   +qa + +qPq+TG
  EPX70802.1  96 SQMTGYNGMMNTGMPPMGYVQPQRTGSAPVPPMGGFMQPQKTGSQPFNPmsnFVQPQQTGSvLPQASGFVQPQRTG 171
                 488*******************************9********666666899*********99************9 PP

  == domain 2  score: 14.7 bits;  conditional E-value: 1.9e-05
     DUF1720   1 lqpqqtGfqppqqqqpqqqqplqpqpTGfmpqqqtgqglqpqpTGggqfapglqpqqTGfqe 62 
                 +qpq+tG qp ++  +     +qpq+TG + +q +g  +qpq+TG  + ++g+ pqqTG+++
  EPX70802.1 132 MQPQKTGSQPFNPMSN----FVQPQQTGSVLPQASG-FVQPQRTG--TAPQGFFPQQTGGFM 186
                 7999999987777644....4569999999888888.99999999..444478899999833 PP

  == domain 3  score: 12.7 bits;  conditional E-value: 7.8e-05
     DUF1720   3 pqqtGfqppqqqqpqqqqplqpqpTGfmpqqqtgq............glqpqpTG.ggqfap...........glqpqqTGf.......qeqaqqglqP 70 
                 pq+ Gf +pq +++++q ++ pq+TG ++q +++             + qpq+TG +g+f++            lqpq+TG         +++++g++P
  EPX70802.1 159 PQASGFVQPQRTGTAPQ-GFFPQQTGGFMQYPGTNgqsfnnlmngymQPQPQKTGgFGSFIQpqktgtvfpqpTLQPQRTGTyvnqigfTQPQAMGMAP 256
                 67777777777777777.666666666665555446677777777665555566655555555555555555689999999999999988889999999 PP

     DUF1720  71 qaTGf 75 
                 q+TGf
  EPX70802.1 257 QSTGF 261
                 99998 PP

  == domain 4  score: 20.0 bits;  conditional E-value: 4.3e-07
     DUF1720  20 qplqpqpTGfmpqqqtgqglqpqpTGggqfapglqpqqTGfqeqaqqglqPqaTG 74 
                 +  qpq+ G+ pq ++   +qpqpTG  +fa+ +qpq+T + +++ ++l+Pq+TG
  EPX70802.1 245 GFTQPQAMGMAPQSTG--FIQPQPTG--PFASFVQPQPTSM-QTPVAPLKPQKTG 294
                 3459999999997776..89******..5555589******.9999********9 PP

  == domain 5  score: 18.4 bits;  conditional E-value: 1.4e-06
     DUF1720   2 qpqq.tGfqppqqqqpqqq...qplqpqpTGfmpqqqtgqglqpqpTGggqfapglqpqqTGfqeqaqqglqPqaTG 74 
                 qp + +G q++  q++      +++ +q TG++pqq+   g+qpq TG   f+++++pq+TG+       + Pq+TG
  EPX70802.1 418 QPVSqGGAQQMAAQMFNGFqqaAGIPSQITGMFPQQT---GIQPQLTG---FQQPMMPQRTGG-------MPPQKTG 481
                 66442343333333332224459***********998...9*******...9999********.......9999999 PP

  == domain 6  score: 27.9 bits;  conditional E-value: 1.5e-09
     DUF1720   1 lqpqqtGfqppqqqqpqqqqplqpqpTGfmpqqqtgq..glqpqpTGggqfapglqpqqTGfqeqaqqglqPqaTG 74 
                 ++pq+tG +ppq+++ +++  ++pq+TG mp+q+tg   +++pq+TG    +p+++pq+TG        l+ q+TG
  EPX70802.1 679 MMPQRTGGMPPQMTGGMPP--MMPQRTGGMPPQMTGGmpPMMPQRTG---GMPPMMPQRTGN-------LTAQPTG 742
                 79************99998..**************99**********...666699999999.......8888888 PP

  == domain 7  score: -1.0 bits;  conditional E-value: 1.5
     DUF1720   16 pqqq.qplqpqpTGfmpqq 33  
                  p+++ +p  p++ Gf+p+ 
  EPX70802.1 1501 PPPSaPPAPPTSSGFNPFS 1519
                  4444445555556655543 PP

>> EF-hand_4  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.7   0.0   7.8e-12   1.3e-08       6      94 ..     311     397 ..     306     405 .. 0.87
   2 !   52.6   0.0   2.1e-17   3.5e-14       5      98 ..     791     883 ..     787     889 .. 0.91

  Alignments for each domain:
  == domain 1  score: 34.7 bits;  conditional E-value: 7.8e-12
   EF-hand_4   6 eleikkyweifsglkpednkltgdkvapvlknskleedklekiwdladidedgkldfeefciamrlifdlvngeikdvPselPewlvpe 94 
                 +++ +k+ ++f++   +++ ++ d + ++l  skl++  l+kiw+l+d    g+l f +f++am l       + k +P+++Pe ++ e
  EPX70802.1 311 ASDQEKFEKLFRSAVGNEEAMSADIAKAILVRSKLPTPTLSKIWSLSDTTRSGHLMFPQFVLAMYLCNL--GLTGKPIPDKVPENILGE 397
                 56789999********************************************************99753..444567899999887665 PP

  == domain 2  score: 52.6 bits;  conditional E-value: 2.1e-17
   EF-hand_4   5 eeleikkyweifsglkpe.dnkltgdkvapvlknskleedklekiwdladidedgkldfeefciamrlifdlvngeikdvPselPewlvpeskah 98 
                  + e++ y +if + ++e + +l g+ v  ++ +skl+ ++le++w+l+d  + g+ld +ef +a++li+  +ng+  +vPselP  l+p s ++
  EPX70802.1 791 SKEEKRIYDQIFDAWDKEkKGTLGGNAVLEIFGQSKLSRSELEHLWNLCDHGDKGCLDRDEFSVALHLIYRKLNGN--AVPSELPPELIPPSTRN 883
                 5678899*******976515689***************************************************97..6***********99876 PP

>> WH2  WH2 motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.2   7.8e-09   1.3e-05       2      30 .]    1669    1694 ..    1668    1694 .. 0.87

  Alignments for each domain:
  == domain 1  score: 24.9 bits;  conditional E-value: 7.8e-09
                  -TCCHHHHHHHHHH..HTTBSS--XEEXX CS
         WH2    2 gggRgALLadIraGskaqLKKveetndrs 30  
                  +g+R+ALL +I+aG+k  L+K   tnd+s
  EPX70802.1 1669 PGERSALLNQIQAGTK--LRKS-ITNDKS 1694
                  799***********88..***7.777776 PP

>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.83   1.4e+03      37      70 ..     341     374 ..     308     375 .. 0.68
   2 !   17.7   0.1   2.2e-06    0.0036       2      67 ..     795     853 ..     794     856 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.83
   EF-hand_7  37 egsklsdeelellfkefDtdkdGvisfdEFlkly 70 
                   skl+   l +++   Dt+++G + f  F+ ++
  EPX70802.1 341 VRSKLPTPTLSKIWSLSDTTRSGHLMFPQFVLAM 374
                 34444555688999999********999998766 PP

  == domain 2  score: 17.7 bits;  conditional E-value: 2.2e-06
   EF-hand_7   2 eklkea.FkelDtdgdgyldkeellrllrkifqgagegsklsdeelellfkefDtdkdGvisfdEFl 67 
                 +++++  F++ D+ + g l  + +l   ++       +skls+ ele+l++  D+ + G++++dEF 
  EPX70802.1 795 KRIYDQiFDAWDKEKKGTLGGNAVL---EI-----FGQSKLSRSELEHLWNLCDHGDKGCLDRDEFS 853
                 56777779999***********955...54.....45688899***********************6 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0         5   8.2e+03       5      26 ..     353     374 ..     350     375 .. 0.78
   2 ?    4.6   0.0     0.022        36       4      23 ..     800     819 ..     797     828 .. 0.81
   3 !    8.4   0.0    0.0014       2.3       1      26 [.     831     856 ..     831     862 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 5
   EF-hand_6   5 aFklfDkdgdGkidaeElrkal 26 
                 ++ l D++++G++ + +++ a+
  EPX70802.1 353 IWSLSDTTRSGHLMFPQFVLAM 374
                 566679*****99888887665 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.022
   EF-hand_6   4 eaFklfDkdgdGkidaeElr 23 
                 ++F+++Dk++ G++  + + 
  EPX70802.1 800 QIFDAWDKEKKGTLGGNAVL 819
                 79***********9877555 PP

  == domain 3  score: 8.4 bits;  conditional E-value: 0.0014
   EF-hand_6   1 elreaFklfDkdgdGkidaeElrkal 26 
                 el+++++l D+ + G++d++E+  al
  EPX70802.1 831 ELEHLWNLCDHGDKGCLDRDEFSVAL 856
                 68899*****************7766 PP

>> Prefoldin_2  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   3.8   1.6e-05     0.027       9     101 ..     976    1067 ..     970    1071 .. 0.92
   2 ?    2.8   0.7     0.067   1.1e+02       8      87 ..    1082    1104 ..    1074    1120 .. 0.44

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 1.6e-05
                   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-TT--EEEEETTEEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
  Prefoldin_2    9 qlqqqlqqlaqqikqletqlkelelvleelelldedtkvyklvGdvlvkqdkeevkeeLeerketlekeiktlekqleklekeleelkeelqk 101 
                    l++ +++ +  ++ le+++  + +v+++ +l+d  + v   + ++lvkq+ +e+ + L +r++ l+ ++++l ++ ++  ++l++l +++q 
   EPX70802.1  976 HLKKNIREKEILLNALEEKKAAHSDVSNNASLIDRIKSVHNEINEILVKQKSPEA-DSLRTRLNALSSKVTQLVSEVTTADNKLADLSSSIQT 1067
                   577888888888999***************************************8.57****************************9999885 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.067
                   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-TT--EEEEETTEEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Prefoldin_2    8 qqlqqqlqqlaqqikqletqlkelelvleelelldedtkvyklvGdvlvkqdkeevkeeLeerketlekeiktlekqlek 87  
                   ++++                                                         ++ +t e+ +k+l+ ++++
   EPX70802.1 1082 NNIE---------------------------------------------------------QQRNTSEASLKQLKTSIDS 1104
                   2222.........................................................2222222222222222222 PP

>> Prominin  Prominin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   7.4   9.8e-05      0.16     294     414 ..     985    1101 ..     964    1110 .. 0.86

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 9.8e-05
    Prominin  294 eeCskilssleiekldtskcldqlpnvdevlealeevletnlssivkeglarlneipekvknqtaevvpdlkkalakgreqikklakkiprealdav 390 
                  e   ++l+++++ + d+s++ + ++ +++v ++++e+l ++ s  + +  +rln++++kv++ ++ev+    ++la+ ++ i++   +i    l  v
  EPX70802.1  985 EILLNALEEKKAAHSDVSNNASLIDRIKSVHNEINEILVKQKSPEADSLRTRLNALSSKVTQLVSEVT-TADNKLADLSSSIQTSNGDI---DLRGV 1077
                  555677888999999*********************************************98887765.67899***************...89999 PP

    Prominin  391 isdlenterssktfddvvekyeky 414 
                  +s+++n+e++ +t +  ++++ + 
  EPX70802.1 1078 SSEMNNIEQQRNTSEASLKQLKTS 1101
                  999999999999999999887765 PP

>> Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   7.7   0.00013      0.21      53     120 ..    1000    1070 ..     965    1086 .. 0.72
   2 ?    1.9   1.7      0.13   2.1e+02      18      69 ..    1074    1117 ..    1064    1139 .. 0.65

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00013
  Baculo_PEP_C   53 dlksllaeldtrldtlltnLtdalnalq....dtlrneLtnlnsiltnLlssvtNinstLnnllqalnnldl 120 
                    d+++  a+l +r++++ +++++ l + +    d+lr++L++l s++t+L+s+vt   + L+ l ++++  + 
    EPX70802.1 1000 DVSN-NASLIDRIKSVHNEINEILVKQKspeaDSLRTRLNALSSKVTQLVSEVTTADNKLADLSSSIQTSNG 1070
                    3333.233444666677777776666669999******************************9999987644 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.13
  Baculo_PEP_C   18 LtnvLnairlqnvqilaqlatlldaietqLnalsedlksllaeldtrldtll 69  
                    L  v + +        ++++++ ++ e +L++l++++ s   e +++ld+l 
    EPX70802.1 1074 LRGVSSEM--------NNIEQQRNTSEASLKQLKTSIDSIELETRKQLDSLR 1117
                    43333333........667777777777777777777776666666666654 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.2      0.24     4e+02     196     249 ..     964    1013 ..     920    1020 .. 0.71
   2 ?    8.1   7.0   0.00091       1.5     130     220 ..    1012    1121 ..     978    1139 .. 0.68

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.24
     DUF4407  196 qaelaelkakldatarlaalraelaeleaerakeraasqaaaaaddGllarlea 249 
                  +  l+ l++   +++ l+++ +e++ l +++++++aa+ +  ++++ l++r++ 
  EPX70802.1  964 TDSLNGLND---ESEHLKKNIREKEILLNALEEKKAAHSD-VSNNASLIDRIKS 1013
                  333333333...5888888888888888888888888877.6667888888875 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.00091
     DUF4407  130 a....................ltaelaeleaqiaalqaeidaaearldalraeaqkeldgtkgtgttgvaGkgpaakekkaqldaaqaelaelkakl 206 
                  +                    l+++l++l +++++l +e+++a+++l++l    q      +++g    +G   ++ + ++q ++ +a l++lk+++
  EPX70802.1 1012 KsvhneineilvkqkspeadsLRTRLNALSSKVTQLVSEVTTADNKLADLSSSIQ------TSNGDIDLRGVSSEMNNIEQQRNTSEASLKQLKTSI 1102
                  0444444444444433333346777777777777777777777777777777776......256777799**************************8 PP

     DUF4407  207 d.....atarlaalraela 220 
                  d      +++l++lr+  +
  EPX70802.1 1103 DsieleTRKQLDSLRNMDD 1121
                  8887776666666666555 PP

>> CLZ  C-terminal leucine zipper domain of cyclic nucleotide-gated channels
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.2     0.002       3.3      32      62 ..    1029    1059 ..    1006    1061 .. 0.89
   2 ?    0.3   0.4      0.57   9.4e+02      19      49 ..    1081    1111 ..    1070    1122 .. 0.69

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.002
         CLZ   32 kverLessLeaLqtrlarLlaeyessqrkLk 62  
                   +++L ++L+aL  ++ +L++e++++++kL 
  EPX70802.1 1029 EADSLRTRLNALSSKVTQLVSEVTTADNKLA 1059
                  5789*************************96 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.57
         CLZ   19 aakagaeqkeleekverLessLeaLqtrlar 49  
                  +++ ++++++ e  +++L++s+++++   ++
  EPX70802.1 1081 MNNIEQQRNTSEASLKQLKTSIDSIELETRK 1111
                  4566677778888888888888876655555 PP

>> FlaC_arch  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       2.7   4.3e+03      15      31 ..     966     982 ..     959     985 .. 0.64
   2 ?    3.7   0.3     0.049        80       1      31 [.    1036    1066 ..    1007    1073 .. 0.76
   3 ?    6.6   1.3    0.0062        10       7      35 ..    1079    1107 ..    1074    1115 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 2.7
   FlaC_arch  15 eletvkkeneelsksve 31 
                 +l+ + +e e+l+k++ 
  EPX70802.1 966 SLNGLNDESEHLKKNIR 982
                 56666666666666664 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.049
   FlaC_arch    1 ridelEnklsklsteletvkkeneelsksve 31  
                  r++ l +k+ +l +e++t+ +++ +ls+s++
  EPX70802.1 1036 RLNALSSKVTQLVSEVTTADNKLADLSSSIQ 1066
                  5667777777777777777777777777776 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.0062
   FlaC_arch    7 nklsklsteletvkkeneelsksveelke 35  
                  +++++++ + +t ++++++l++s++ ++ 
  EPX70802.1 1079 SEMNNIEQQRNTSEASLKQLKTSIDSIEL 1107
                  79***********************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1718 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1345  (0.0750181); expected 358.6 (0.02)
Passed bias filter:                      586  (0.0326845); expected 358.6 (0.02)
Passed Vit filter:                        99  (0.00552178); expected 17.9 (0.001)
Passed Fwd filter:                        28  (0.00156172); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 1.48u 0.39s 00:00:01.87 Elapsed: 00:00:00.58
# Mc/sec: 8972.41
//
Query:       EPX70803.1  [L=725]
Description: translation initiation factor eIF3b [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.3e-40  136.9   2.2    4.5e-38  131.1   0.5    3.0  3  eIF2A           Eukaryotic translation initiation factor eIF2
    0.00026   20.8   0.1    0.00075   19.3   0.1    1.8  1  RRM_1           RNA recognition motif. (a.k.a. RRM, RBD, or R
  ------ inclusion threshold ------
       0.06   14.2   0.6         73    4.5   0.0    4.7  5  WD40            WD domain, G-beta repeat
       0.12   12.8   0.1        1.1    9.6   0.1    2.2  2  HAD             haloacid dehalogenase-like hydrolase
       0.74   10.8   3.2         71    4.5   0.1    3.7  3  Myb_DNA-bind_3  Myb/SANT-like DNA-binding domain


Domain annotation for each model (and alignments):
>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0     0.028     1e+02     130     159 ..     178     209 ..     170     214 .. 0.78
   2 ?    3.2   0.0     0.019        69     104     162 ..     197     251 ..     185     256 .. 0.70
   3 !  131.1   0.5   1.3e-41   4.5e-38       1     192 [.     400     617 ..     400     619 .. 0.86

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.028
                 EETT..TTEEEEEEE-TT--EEEE-TTSSEEE CS
       eIF2A 130 wdvk..kkkkiakaeaanatlvewspdgryvl 159
                 w++k    ++i + e+ + t+v+wsp g+y++
  EPX70803.1 178 WNRKsdIPEQIVNRENWTETYVQWSPLGTYLV 209
                 6666533578888999999***********98 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.019
                 -EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-TT--EEEE-TTSSEEEEEE CS
       eIF2A 104 NtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakaeaanatlvewspdgryvlTat 162
                   + +sp g++++   ++ +    ++w  ++ +  a++ ++    +++sp+ +y++  +
  EPX70803.1 197 TYVQWSPLGTYLVSLHLRGI----QLWGGESWNMCARFLHPYVKFIDFSPNEKYLVSWS 251
                 45677777777777777665....77888888888888888888888888888877655 PP

  == domain 3  score: 131.1 bits;  conditional E-value: 1.3e-41
                 EEESSECEEEEEE-TTTTEEEEEEE.E--TT-CEEEEEEEEEESSSTT--EEECCEESSS.EEEEEE-TTSS-EEEEES........SSSCEEEEEEC. CS
       eIF2A   1 ksffkadkvklkWnkkGtsllvlvstevdktnksyygetelyliklkkkksevvelkkegpihdvaWspkskefaviyG........kmpakvslfdl. 90 
                 k++f+++++kl+W+++G+ l v+v+ +++kt+ks+ ++ e+++i++k++++evvelk    i  +aW+pks++fa+i          ++  + s++   
  EPX70803.1 400 KNLFNVSDCKLYWQSNGDFLSVKVD-RHTKTKKSTFSNLEIFRIREKNIPVEVVELKDV--ILNFAWEPKSDRFAIISAndqilsstNVKTTLSFYGFd 495
                 89***********************.89****************************665..****************9866666533344456676552 PP

                 .S......CEEEEEEEEES--EEEE-TTSSEEEEE-TTS.SS-EEEEEETT............TTEEEEEEE-TT--EEEE-TTSSEEEEEE-TTT-SS CS
       eIF2A  91 .k......vkviskleeqkrNtiffspkgklvllaGfgn.laGeleiwdvk............kkkkiakaeaanatlvewspdgryvlTattaprlrv 169
                  k       + i+++++++ N+iff p+g++++ a +g+ ++ +le++d++            ++++i ++e++  t +ew+p+gryv+T++t++r+++
  EPX70803.1 496 hKknttstFRHIASFDKKSLNSIFFAPNGRFLIGATLGSaTQYDLEFYDMDfdtdkkepdalaNVQQIGSTEHFGMTELEWDPSGRYVTTSSTVWRHKL 594
                 23677777999***************************835699***99866543333333345678999***************************** PP

                 S-EEEEEETTTEEEEEEE-TTEE CS
       eIF2A 170 dngfkiwsysGklvykkefdely 192
                 +ng++i  + G+l+ ++++  + 
  EPX70803.1 595 ENGYRISDFRGTLLREEMIPDFK 617
                 ****************9987765 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.1   2.1e-07   0.00075      17      66 ..      64     118 ..      63     121 .. 0.79

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 2.1e-07
                 HHHHTTSCEEE..EEEEEE...TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETT CS
       RRM_1  17 elFskfGpiks..iklvrd...etgkskgfafVeFeskedAekAlealngkklgg 66 
                 +lF k+G++k+  + ++ +    ++ s+g+ f +Fe+ e A+ ++++l+gk++ +
  EPX70803.1  64 RLFAKIGKVKEngLHMPLEdkdGKKVSNGIVFADFETVEFADLCVQELDGKQILK 118
                 68999999955114444446788999************************88755 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       2.9     1e+04      16      27 ..     199     210 ..     197     221 .. 0.84
   2 ?    1.0   0.0      0.26   9.4e+02      13      27 ..     235     249 ..     227     283 .. 0.78
   3 ?   -1.4   0.0       1.5   5.3e+03      13      26 ..     405     420 ..     395     428 .. 0.72
   4 ?    2.0   0.0      0.13   4.5e+02      12      28 ..     510     529 ..     498     542 .. 0.71
   5 ?    4.5   0.0      0.02        73       9      29 ..     567     587 ..     559     592 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 2.9
                 EEEETTSSEEEE CS
        WD40  16 lafspdgawlas 27 
                 +++sp g++l+s
  EPX70803.1 199 VQWSPLGTYLVS 210
                 789999999986 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.26
                 EEEEEEETTSSEEEE CS
        WD40  13 vtslafspdgawlas 27 
                 v  ++fsp+ ++l+s
  EPX70803.1 235 VKFIDFSPNEKYLVS 249
                 666899****99986 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 1.5
                 EEEEE..EETTSSEEE CS
        WD40  13 vtsla..fspdgawla 26 
                 v++++  ++++g++l+
  EPX70803.1 405 VSDCKlyWQSNGDFLS 420
                 66666779******84 PP

  == domain 4  score: 2.0 bits;  conditional E-value: 0.13
                 S....EEEEEEETTSSEEEEE CS
        WD40  12 s....vtslafspdgawlasG 28 
                 +     +s+ f p+g++l+ G
  EPX70803.1 510 FdkksLNSIFFAPNGRFLI-G 529
                 1344478888*******97.5 PP

  == domain 5  score: 4.5 bits;  conditional E-value: 0.02
                 SSSSEEEEEEETTSSEEEEEE CS
        WD40   9 GHssvtslafspdgawlasGs 29 
                  H++ t l ++p+g++++++s
  EPX70803.1 567 EHFGMTELEWDPSGRYVTTSS 587
                 6777899**********9886 PP

>> HAD  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0      0.28     1e+03      96     130 ..     462     500 ..     449     521 .. 0.77
   2 ?    9.6   0.1    0.0003       1.1       3      97 ..     601     688 ..     600     719 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.28
         HAD  96 ahraaGdrvvvvSgg....lrplvepllaelgadevlat 130
                 a+  + dr++++S++     + +v+ +l ++g+d+  +t
  EPX70803.1 462 AWEPKSDRFAIISANdqilSSTNVKTTLSFYGFDHKKNT 500
                 56678899*******888778889999999998886666 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.0003
         HAD   3 fDfDgTLldgdslelllrfllrrgaprlwralreklllalfrellrldraglaelleallaglseelaaelerfvaevirpklldpgalellaah 97 
                 +Df gTLl++++++ + + +l+r++p+   + +e  ++++ r+l ++ ++ ++e   a  +  + elaa+ + ++ e++r   +++++ +++++ 
  EPX70803.1 601 SDFRGTLLREEMIPDFKQ-FLWRPRPP-TLLSKEDMKNIR-RKLKDY-NRLFDEEDIAETSTANRELAARRRTLISEWQR---YREEVTARVSEE 688
                 7999***********999.99998877.344444444444.444444.55566666666777777888888888888876...778888888854 PP

>> Myb_DNA-bind_3  Myb/SANT-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.1     0.022        81       8      58 ..     101     151 ..      96     197 .. 0.89
   2 ?    4.5   0.1      0.02        71      74      94 ..     571     591 ..     565     593 .. 0.88
   3 ?   -0.6   0.0      0.76   2.7e+03      30      73 ..     630     649 ..     610     682 .. 0.58

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.022
  Myb_DNA-bind_3   8 kilvdllveqvkkgnriekktfkkeawkeileefnaktgakytkkqlknrl 58 
                       + dl+v++ + +   +++ f  +  +++ +++n+  +  +++++ k+r 
      EPX70803.1 101 VEFADLCVQELDGKQILKNHVFVVRKLSQLEKALNTPEEFTFEEREFKERE 151
                     5699*****998888889******************999999999999885 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.02
  Myb_DNA-bind_3  74 rsgfsWDpttktvtAddevWk 94 
                     + +++WDp+ + vt++  vW+
      EPX70803.1 571 MTELEWDPSGRYVTTSSTVWR 591
                     56799***************8 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.76
  Myb_DNA-bind_3  30 kkeawkeileefnaktgakytkkqlknrlkklrkeyklvkelle 73 
                     +ke +k+i ++++++                        ++l++
      EPX70803.1 630 SKEDMKNIRRKLKDY------------------------NRLFD 649
                     444444444444443........................33322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (725 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       562  (0.0313459); expected 358.6 (0.02)
Passed bias filter:                      396  (0.0220871); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.65u 0.33s 00:00:00.98 Elapsed: 00:00:00.48
# Mc/sec: 4501.33
//
Query:       EPX70804.1  [L=1090]
Description: kinesin-like protein Cut7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   9.1e-109  363.4   0.7   9.1e-109  363.4   0.7    3.2  3  Kinesin          Kinesin motor domain
    6.7e-25   87.8   5.9      6e-24   84.7   0.0    3.8  3  Microtub_bd      Microtubule binding
  ------ inclusion threshold ------
        0.2   11.3   5.2      0.084   12.5   1.0    2.3  2  Methyltr_RsmB-F  16S rRNA methyltransferase RsmB/F


Domain annotation for each model (and alignments):
>> Kinesin  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  363.4   0.7  1.5e-112  9.1e-109       1     333 []      74     419 ..      74     419 .. 0.95
   2 ?   -3.4   4.1      0.58   3.5e+03     135     194 ..     534     590 ..     473     598 .. 0.72
   3 ?    0.4   1.6     0.042   2.5e+02      23      78 ..     760     814 ..     734     817 .. 0.75

  Alignments for each domain:
  == domain 1  score: 363.4 bits;  conditional E-value: 1.5e-112
                 EE-SSSHHHHTTTTEBCEEEECTCTCEEEEEEEEECTTSCEEEEESEEEETTS-HHHHHHHHHHHHHHHHHTTSEEEEEEEESTTSSHHHHHTBC.... CS
     Kinesin   1 RvRplnekekeeeeeeeveveeekkeeekkskkenkeeeekkfkFdkvfdeeatqeevyeetakplvesvleGynatifaYGqtgsGKTyTmegk.... 95 
                 RvR ++++e +++++ +v+++ +  +e + +++ ++    k+++Fdkvf++ea+q  ++e++++p++++vl+Gyn+t+faYGqtg+GKTyTm+g+    
  EPX70804.1  74 RVRGRSDREIRDNSALAVSTSGAVGAELAIQSDPSSMLVAKTYAFDKVFGPEADQLMLFEHAVSPILTQVLNGYNCTVFAYGQTGTGKTYTMSGDlsdf 172
                 99************************************************************************************************* PP

                 ...TTTSBSHHHHHHHHHHHHHHHCTTTHEEEEEEEEEEEEEETTEEEETTSTTTTSTSSEBEEEECTTSC.CEEETTS--EEESSHHHHHHHHHHHHH CS
     Kinesin  96 ...eeeeeGiipraleelFesikkekeekekefsvkvsylEiYneeiyDLLeskkskkkkklkiredskkg.evyvkgltevevksaeevlellekgek 190
                     +e +G+ipral +lF++++++ +    e+ vk+sy+E+Yneei+DLL +++   +k+ ++ ed++++ +v+v+g++e  +k+a e l+ll++g+ 
  EPX70804.1 173 ngiLSEGAGLIPRALYTLFSTLDNTGQ----EYAVKCSYYELYNEEIRDLLVPDD--LRKRAQVFEDTSRQgNVVVTGMEEFYIKNAAEGLRLLREGSY 265
                 ***8889***************88654....69********************94..5666899998876669************************** PP

                 HHTSTTSSCTSHHCCSEEEEEEEEEEEETTTTTCEE..............EEEEEEEEEEEEECCCHHHHSSTCHHHHHHHHHHHHHHHHHHHHHHHHH CS
     Kinesin 191 nrkvaetklneeSSRSHavftitleqknlkeeteek..............vkisklnLvDLAGsErasktgaaegerlkEaaniNkSLlaLgrvisaLa 275
                 +r+va+tk+n+ SSRSH++ftit+  k ++++++e               +++skl++vDLAGsE++ ++g a+++r +E++ iN+SLl+Lgrvi+aL+
  EPX70804.1 266 RRHVAATKCNDLSSRSHSIFTITICTKVTSSSSHEPgftnmssnnspddyMRVSKLHMVDLAGSENIGRSG-AGNKRARETGMINQSLLTLGRVINALV 363
                 **************************99988777336778999****************************.58999********************** PP

                 HTCCTSTSCGGGSHHHHHTGGGHSSSSEEEEEEEE-TBGGGHHHHHHHHHHHHHHCTT CS
     Kinesin 276 ekkkskhipYRdSkLTrlLqdsLgGnsktlmivtvspssenleetlstlkfaerakei 333
                 ek  s+hipYR+SkLTrlLqdsLgG++kt mivtvs +++n+eetlstl++a+rak+i
  EPX70804.1 364 EK--SHHIPYRESKLTRLLQDSLGGKTKTSMIVTVSSTNSNMEETLSTLEYASRAKSI 419
                 **..****************************************************97 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 0.58
                 ETTEEEETTSTTTTSTSSEBEEEECTTSCCEEETTS--EEESSHHHHHHHHHHHHHHHTS CS
     Kinesin 135 YneeiyDLLeskkskkkkklkiredskkgevyvkgltevevksaeevlellekgeknrkv 194
                  ne++++ L+s+  +k+k+++  e++   +++ ++l++   +s e +++l ek ++  k+
  EPX70804.1 534 ENEKLREQLNSE-MEKRKEYETSEQKI--TTVASDLSQYYRESKEYIIRLYEKLSRTEKT 590
                 388888888888.46666677666666..3677889999999988888888776655555 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.042
                 TCTCEEEEEEEEECTTSCEEEEESEEEETTS-HHHHHHHHHHHHHHHHHTTSEEEE CS
     Kinesin  23 ekkeeekkskkenkeeeekkfkFdkvfdeeatqeevyeetakplvesvleGynati 78 
                 ++  ++ +++ ++++++ ++f  ++ ++ee +q+e+++++ + +v ++l+ +n ++
  EPX70804.1 760 TTILQSCTTSLSENNSTVEQFLNEHKVQEEIKQKELMNRI-NTVVGQFLQEQNQLL 814
                 33455667777888889999*******************5.9*********99876 PP

>> Microtub_bd  Microtubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.7   0.0     1e-27     6e-24      19     149 .]      66     219 ..      62     219 .. 0.82
   2 ?    1.2   0.2     0.053   3.2e+02      22      89 ..     578     659 ..     572     690 .. 0.71
   3 ?    0.6   1.7      0.08   4.8e+02      25      84 ..     744     812 ..     724     836 .. 0.77

  Alignments for each domain:
  == domain 1  score: 84.7 bits;  conditional E-value: 1e-27
                  CTB-EEEEEEECCCS-T...........EEEETTT...............TTTEEEE-SEEEECTTHCCCCCCC.CHHHHHHHHTT--EEEEEEES.. CS
  Microtub_bd  19 kGniRvfarvrpelesek..........akikfpe............eekkkkkefsFdrvfeseseqeevfee.isqlvqsaldgynvcifaygqTG 93 
                    ni v +rvr ++++e                              +    +k++ Fd+vf +e+ q ++fe  +s +++ +l+gyn+++faygqTG
   EPX70804.1  66 ETNINVAVRVRGRSDREIrdnsalavstS-----GavgaelaiqsdpSSMLVAKTYAFDKVFGPEADQLMLFEHaVSPILTQVLNGYNCTVFAYGQTG 158
                  56777777777777776555656433330.....1333445555566777899***************9999863799******************** PP

                  ......................ST-HCHHHHHHHHHHCCTSCCCCEEEEEEEEEEESS-EEETT CS
  Microtub_bd  94 sGKtyTmeg........eeeeagmipraveeifetiselkekgwkyeielqfveiynekvqDlL 149
                   GKtyTm+g         +e ag ipra+ ++f+t+ ++   g++y++++++ e+yne+++DlL
   EPX70804.1 159 TGKTYTMSGdlsdfngiLSEGAGLIPRALYTLFSTLDNT---GQEYAVKCSYYELYNEEIRDLL 219
                  *********99988877788999**********999998...99*******************8 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.053
                  -EEEEEEECCCS-.T.EEEETTT.................TTTEEEE-SEEEECTTHCCCCCCCCHHHHHHHHTT--EEEEEE CS
  Microtub_bd  22 iRvfarvrpeles.ekakikfpe..............eekkkkkefsFdrvfeseseqeevfeeisqlvqsaldgynvcifay 89 
                  iR + ++++++++ e+ + kf +              +  ++  +  F+ + + +++ e+++++ s+l++ ++++ n   + +
   EPX70804.1 578 IRLYEKLSRTEKTsEENETKFLNlkqellamltsfqgN-ITNGTNGYFNLLNTFNASMEDIINNHSVLLNTSVQQVNAHFINL 659
                  77777777666663444555543334555666667642.333333346666666778999**************999887765 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.08
                  EEEEECCCS-T........EEEETTT..........TTTEEEE-SEEEECTTHCCCCCCCCHHHHHHHHTT--E CS
  Microtub_bd  25 farvrpelesek.......akikfpe.......eekkkkkefsFdrvfeseseqeevfeeisqlvqsaldgynv 84 
                  f++ ++el s +       +     +       e++++ ++f  ++ +++e +q+e+++ i+ +v   l++ n 
   EPX70804.1 744 FCKSQKELISTAkdeittiL-----QscttslsENNSTVEQFLNEHKVQEEIKQKELMNRINTVVGQFLQEQNQ 812
                  78888777774333433321.....1334456688899999999999999999999999999999999988886 PP

>> Methyltr_RsmB-F  16S rRNA methyltransferase RsmB/F
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   1.0   1.4e-05     0.084     103     166 ..     727     793 ..     712     826 .. 0.75
   2 ?   -0.5   0.2      0.13     8e+02     113     179 ..     867     932 ..     856     945 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.4e-05
                      HH--HHHHHHHHHHHHHHHHHHCCCE...EEEEEEEEEES--STTTTHHHHHHHHHH-TTEEEESSB CS
  Methyltr_RsmB-F 103 lrrkekdiaqlaklqkellsaaidll...kkgGvlvYsTCsvlveEneevieeaLkkredvelvete 166
                      +r+  +d+ +l + q+   ++  +l+   k + + +   C+  + En+  +e++L++++  e ++ +
       EPX70804.1 727 YRKVVQDLRTLFNSQQSFCKSQKELIstaKDEITTILQSCTTSLSENNSTVEQFLNEHKVQEEIKQK 793
                      56667899999999999998877777666899999999********************877655543 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.13
                      HHHHHHHHHHHHCCCEEEEEEEEEEES--STTTTHHHHHHHHHH-TTEEEESSBSTTSTTSSECEEC CS
  Methyltr_RsmB-F 113 laklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkredvelvetelsepkglklgeea 179
                        ++ + ll+a  ++++++   vY  C  l e ++e + +  ++  d  l+++++++ ++l+ ++e+
       EPX70804.1 867 TISQSSGLLDAKGKSIHSNSRSVYDECMTLAESQKENVYSEVRTL-DRLLQSLQAHSDDHLQEKHEK 932
                      5556678999999**************999999999998888777.566777777777777766666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1090 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2084  (0.116236); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        78  (0.00435049); expected 17.9 (0.001)
Passed Fwd filter:                        26  (0.00145016); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.27u 0.31s 00:00:01.58 Elapsed: 00:00:00.54
# Mc/sec: 6087.45
//
Query:       EPX70805.1  [L=68]
Description: 40S ribosomal protein S28 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.7e-33  113.0   1.6    5.2e-33  112.8   1.6    1.0  1  Ribosomal_S28e  Ribosomal protein S28e


Domain annotation for each model (and alignments):
>> Ribosomal_S28e  Ribosomal protein S28e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.8   1.6   2.9e-37   5.2e-33       2      64 .]       7      67 ..       6      67 .. 0.98

  Alignments for each domain:
  == domain 1  score: 112.8 bits;  conditional E-value: 2.9e-37
                    --EEEEEEEEEE---SSSSEEEEEEEE-S-SS-S-EEEEEEES---TT-EEEES--S--TT-- CS
  Ribosomal_S28e  2 eaklAeVikvlgrtGsrGevtqVrvellegkdkgriiiRnVkGPvreGDiLtLlEterEArrL 64
                    ++klA+VikvlgrtGsrG+vtqVrve+++++  +r+iiRnVkGPvre+DiL+LlE+erEArrL
      EPX70805.1  7 PVKLAKVIKVLGRTGSRGGVTQVRVEFMDDT--SRSIIRNVKGPVREDDILVLLESEREARRL 67
                    589***************************8..*****************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       254  (0.014167); expected 358.6 (0.02)
Passed bias filter:                      211  (0.0117686); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.28s 00:00:00.63 Elapsed: 00:00:00.42
# Mc/sec: 482.20
//
Query:       EPX70806.1  [L=310]
Description: ATP phosphoribosyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      7e-51  172.4   0.1    9.8e-51  171.9   0.1    1.2  1  HisG      ATP phosphoribosyltransferase
    1.4e-26   92.4   0.4    3.2e-26   91.3   0.4    1.6  1  HisG_C    HisG, C-terminal domain
     0.0075   16.2   0.0      0.011   15.7   0.0    1.3  1  NMT1      NMT1/THI5 like


Domain annotation for each model (and alignments):
>> HisG  ATP phosphoribosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  171.9   0.1   1.6e-54   9.8e-51       1     160 []      58     231 ..      58     231 .. 0.92

  Alignments for each domain:
  == domain 1  score: 171.9 bits;  conditional E-value: 1.6e-54
                 -GGGHHHHHHTTSSSEEEEEHHHHHHC....T...TEEEEEEESESEEEEEEEEETTSS--SGCGG.TT-.EEEEES-HHHHHHHHHHT.......... CS
        HisG   1 raadiptyVeegavdlGitGkDvveEs....keeeeveelldLgfgkcklvvavpeesevkslkdlvedkgkriaTsypnlakkyfeek.......... 85 
                 +aadip++V+ g+v+lGitG+D+++E+    +e+ +veel+dL+fg ckl+v+vpe+ +++++k+l   +g+ri+Ts++ l+ +yf+++          
  EPX70806.1  58 PAADIPRFVGTGRVHLGITGQDQIAEArlriGEKLKVEELVDLQFGGCKLQVQVPESGPIQTVKQL---AGQRIVTSFEYLVGDYFKKLdaqmkkdgel 153
                 699***********************7678878889*************************99988...788*****************8888888888 PP

                 ..T-EEEEEE-SS-CTHHHHTTS-SEEEEEESSSHHHHHTTEEEEEEEEEEEEEEEEEHHHHHS.HHHHHHHHHHHHH CS
        HisG  86 ..glkveiiklsGsvEaapalglaDaIvDlvetGeTLrangLkaietilessavLiankkslkk.kekieellerlrg 160
                   + k+ei  +sGsvEa++alg+a+a+vDlve+GeT+ra gLkaie+++++savL+ ++++  + + +++++++r+rg
  EPX70806.1 154 seEAKTEISFVSGSVEASCALGIAEAVVDLVESGETMRASGLKAIENVMSTSAVLVRSTNCSPElEPLLQTIITRIRG 231
                 87779***************************************************666666543559*******986 PP

>> HisG_C  HisG, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.3   0.4   5.4e-30   3.2e-26       1      73 []     235     307 ..     235     307 .. 0.99

  Alignments for each domain:
  == domain 1  score: 91.3 bits;  conditional E-value: 5.4e-30
                 TTTEEEEEEEEEGGGHHHHHHH---SSS-EEEE-.SS-EEEEEEEEECCCHHHHHHHHHCTT-EEEEEEE-S- CS
      HisG_C   1 ArkyvllmynvpkesleevlkilPGlrsPTvspladegwvaVsavveekevaevideLkaaGAsdIlvlpiek 73 
                 A++yvl++ynv +e+l +vlki+PG+r+PT+++l++++wvaVs++v +k+va+v+deL +  A dIlvl+i++
  EPX70806.1 235 AQQYVLVNYNVAREHLTDVLKITPGKRAPTITTLDEPNWVAVSSMVLKKNVAKVMDELSQNHAADILVLSIDN 307
                 9*********************************************************************986 PP

>> NMT1  NMT1/THI5 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   1.8e-06     0.011      31     114 ..      59     142 ..      51     223 .. 0.64

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1.8e-06
                 TTHHHHHHHCTS-SEEEE-HHHHHHHHH...TT--EEEEEEEE-S-.-EEEEEECCC--SSGGGGTTSEEEE-S-TTHHHHHHHHHHH CS
        NMT1  31 psdatelvasgkadfgvsyqesllaara...kglpvvsvaallqep.lsglivlkdsgikspkDLkGkrigyvgspfekallkallak 114
                  +d ++ v++g +++g++ q++++ ar    ++l+v  +  l       +++v ++++i+++k L+G+ri ++     ++l+ +  +k
  EPX70806.1  59 AADIPRFVGTGRVHLGITGQDQIAEARLrigEKLKVEELVDLQFGGcKLQVQVPESGPIQTVKQLAGQRIVTSF----EYLVGDYFKK 142
                 4688999*****************8887322455555555554333135789999999************9776....3333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       532  (0.0296726); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2218.78
//
Query:       EPX70807.1  [L=793]
Description: meiotic recombination protein Rec10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   8.6e-177  589.7  36.9   9.7e-177  589.5  36.9    1.0  1  Red1      Rec10 / Red1


Domain annotation for each model (and alignments):
>> Red1  Rec10 / Red1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  589.5  36.9  5.4e-181  9.7e-177       1     754 []       4     792 ..       4     792 .. 0.94

  Alignments for each domain:
  == domain 1  score: 589.5 bits;  conditional E-value: 5.4e-181
        Red1   1 LsellnelpkskqlitslirstyakklGelldsiqdfQqanylvellSnvFerkstnkpgvisppklweeeeKnklfFnsklypfrGkhgdeqvtkliw 99 
                 L+e+ln l k++ql+++l+++t++++l+ ++++++++Q++++++ ++S+++e++++ +p++is++k++     + l+F  k +p++G+ ++e++t+l +
  EPX70807.1   4 LNEFLNLLTKGRQLTKALLERTLNAVLSLDASEVREKQTISNISSAFSVIGEKEQYSEPKIISCLKIL-----LYLCFVGK-HPDLGDIFIETFTGLDP 96 
                 79******************************************************************.....********.***************** PP

        Red1 100 elfgsvkknigsiklvkyitelgesellnlslssleydesiyiqviyeklyLwlgegfflkiernkveivknLkkklklkligkplkh...avrslsgl 195
                 +l+ s+kk+ig+++l+ +++ l+e+e  +++++ + yde +y+++++e+++L+++++f++k+e+nk+++++n +k+l+l +ig++l+h   a+r+l+gl
  EPX70807.1  97 SLKNSLKKTIGPLTLSLGCQYLNETEYFSVTTNLELYDETEYQMIVFERVVLQIMSLFIAKCEDNKLYLINN-RKELNLYAIGERLTHrdfACRFLCGL 194
                 ************************************************************************.************************** PP

        Red1 196 flsrfskvksfelefhdnairlelfvnatkipkisevQmflalk.FptsvadeikesegsfssgedsssnatltleprdvivyrkgeeLlqqswtsvkq 293
                 f+srfs+++ +e+++++nairl+lf+  ++++ ++++Qm++a++ F+ts a+++k+++g+fs++ ++++nat+++eprdvi+yrkg +Llq sw s+k+
  EPX70807.1 195 FISRFSVSGIDEESNRQNAIRLSLFYANDSSKPTLTMQMLKADRiFQTSAANSTKVFSGTFSVNLETPTNATMIIEPRDVIIYRKGCTLLQLSWGSIKD 293
                 *************************************************************************************************** PP

        Red1 294 vskktkkeksllfttdksdlkeft......dewdllsSslqeekpkltpl.lvsskvtleksssiqeveseeeeqsplvsaqkrklaretsktleklke 385
                 + +++++ ++++fttd+++lk+++       ++ +l+S+lq ++++ltp+ +vs+k+++++s++ +      +++ ++ s +  ++ +e ++t+ek+++
  EPX70807.1 294 IMMTSDESYKFCFTTDIPHLKDCIfecqdnLSFTDLNSTLQYVGDSLTPKlFVSPKIAVNESNNNF------KDTLTEESEHFIRDPLEYDSTYEKFEN 386
                 ****************************8779*********************************9......555555566777999************ PP

        Red1 386 efddksvcdke.qepseettdsesvasekkilepkedknvkkaakeltknsnknkdkvsklkekksigkkdlnilddifakPvskrkk.tkkklksskq 482
                 e+ dks+c ++ +e+s+e+ +++  ++ek+ +++++  n+ ++++ l  n+++ k+  +++ e   + + + ++++d   +P++kr++ +k++ k +++
  EPX70807.1 387 EVLDKSICAESiDEASQEEENENAEVKEKNPENASAGDNISNSENTL--NEETAKE--TETTETMKEYTNQAALENDSTTTPLRKRTRgGKASSKTTRP 481
                 ********99999999999999999999*************999999..5599999..99999999999*******************99********* PP

        Red1 483 kklknlkpvkevkssdvknkksk.pktpsckvknkqlkvplkseekegekqt.ekdse.......eltigeekekkqeeklaeetnetkaeinkkvkkk 572
                 +k+k+++ +++ k+ d++ ++sk ++tp c++++kq k+ l+ ee ++ +q+ ++d+e       ++  g  +++k+e+++ e++++   +i   +k+k
  EPX70807.1 482 PKVKKPRRDEKYKEVDNPLEGSKeEETP-CPKNKKQAKELLRTEEGNNSEQLlSNDKEnqnsnnfQENNGLNDNVKKEKNTVEPMSNIHPPIETMEKVK 579
                 ***********************66676.**************95555444314444433322336666666666666666666666555558899999 PP

        Red1 573 petakkvldtshkakrslkksiwkellkekswkeellepqptgrsrqidlatfeksttsissptpsils................dkqddltesTlisn 655
                 pe ++ +l   +  +++++ksiwk++lk+kswk+ l  ++p++r+rqidlatf+k++ s+ + tps+l+                +  +d ++sTl+s+
  EPX70807.1 580 PEPSNHLLNAWDHPQQPDHKSIWKQMLKDKSWKKDL-FTPPQNRKRQIDLATFTKQGYSTLGSTPSLLNtcssppteasslgpsvNRMEDGSSSTLLSD 677
                 999999999999999********************9.8899********************************************999*********** PP

        Red1 656 tselesslenlfTvklqeqiyssiskfsneltk...........kisiinselnkkIvkeLseKyqkLfsdLqvsFqndtnemleF.......vgeIkd 736
                 t++  ++ enl  vk++e++ ++     +e++k           ++++++s ++k+I++++++++++L+++L+v++ n+tn ++eF       +++I++
  EPX70807.1 678 TTDH-MKEENLRLVKQEEKVSKP-CGLGKEQSKsvgqvdlpnahGVERCVSLIGKQIYSIIIKREERLKEQLNVFHSNSTNLVEEFqerqkarYTSIEK 774
                 **75.*************98665.5666677777***************************************************************** PP

        Red1 737 lLnlpeeeLvkqIrnkkF 754
                 +L++++++L+++I+++ +
  EPX70807.1 775 MLTSVDNSLIHRIKKLVY 792
                 **************9965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (793 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1792  (0.0999498); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.77u 0.36s 00:00:01.12 Elapsed: 00:00:00.49
# Mc/sec: 4899.66
//
Query:       EPX70808.1  [L=318]
Description: transcription factor Zip1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-11   44.5  11.6    2.3e-11   43.6  11.6    1.5  1  bZIP_2    Basic region leucine zipper
    0.00039   20.6   0.7      0.001   19.2   0.7    1.7  1  XhlA      Haemolysin XhlA
    0.00064   19.8   8.8     0.0013   18.8   8.8    1.5  1  bZIP_1    bZIP transcription factor
  ------ inclusion threshold ------
      0.018   15.3   0.1      0.044   14.1   0.1    1.6  1  TSC22     TSC-22/dip/bun family
        1.9    8.7   9.7       0.59   10.4   5.6    2.0  2  DUF4629   Domain of unknown function (DUF4629)


Domain annotation for each model (and alignments):
>> bZIP_2  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.6  11.6   6.4e-15   2.3e-11       4      54 .]     254     304 ..     251     304 .. 0.96

  Alignments for each domain:
  == domain 1  score: 43.6 bits;  conditional E-value: 6.4e-15
                 XXXXXXXXXXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_2   4 eyrerRrkNreAarrsRekkkakeeeleervkeLeeeNaqLrqkveqLeke 54 
                 +++++Rr+N++A++r+R kkk+ke++le++++eL+e+   L+ ++ +Le e
  EPX70808.1 254 AEEDKRRRNTAASARFRIKKKQKEQQLERTANELSEKVISLESRIGELEME 304
                 789*********************************************987 PP

>> XhlA  Haemolysin XhlA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.7   2.9e-07     0.001      21      55 ..     278     312 ..     269     315 .. 0.87

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 2.9e-07
        XhlA  21 dkleekaaeaeekiknleedlkklesnqkWlirti 55 
                 ++le+ a+e  ek+++le ++ +le  ++Wl+++i
  EPX70808.1 278 QQLERTANELSEKVISLESRIGELEMENNWLKGLI 312
                 579*****************************998 PP

>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   8.8   3.5e-07    0.0013       7      61 ..     256     310 ..     251     313 .. 0.92

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 3.5e-07
                 XXXX--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   7 ekrkqkNReaArrsRqRKqaeieeLerrvkaLekeNksLkseleelkkevekLks 61 
                 e ++ +N  a +r+R +K+++ ++Ler + +L+++  sL s+++el+ e++ Lk 
  EPX70808.1 256 EDKRRRNTAASARFRIKKKQKEQQLERTANELSEKVISLESRIGELEMENNWLKG 310
                 56889******************************************99998885 PP

>> TSC22  TSC-22/dip/bun family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.1   1.2e-05     0.044      18      46 ..     286     314 ..     282     316 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 1.2e-05
       TSC22  18 vLkekIkeLeernseleeENslLkalasp 46 
                 +L ek+  Le+r+ ele EN+ Lk l+ p
  EPX70808.1 286 ELSEKVISLESRIGELEMENNWLKGLIRP 314
                 6899********************99877 PP

>> DUF4629  Domain of unknown function (DUF4629)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1      0.46   1.6e+03      10      72 ..     159     221 ..     157     226 .. 0.71
   2 ?   10.4   5.6   0.00017      0.59      42      90 ..     243     291 ..     227     304 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.46
     DUF4629  10 hkasekisgaPkakiqpkdpevllegevvvasaaasdrapentakhseskaqkaassrksktk 72 
                  kase+ ++ P +   p +  + ++ +  ++sa + +   + t+ + +s++ + +  +++k++
  EPX70808.1 159 SKASENQQKIPTPPSFPYKRPSDSSLDLPISSAGNEELITSATTGKRTSTSARLPDLQQHKEQ 221
                 578888888888877777777777777777777777777777777777777777766666654 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00017
     DUF4629  42 aaasdrapentakhseskaqkaassrksktkshgqektkrtrennskka 90 
                 +  sd a+ n a++ ++++++aas+r + +k++++++ +rt ++ s+k+
  EPX70808.1 243 TDSSDAAIRNAAEEDKRRRNTAASARFRIKKKQKEQQLERTANELSEKV 291
                 6789*************************************99999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (318 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1533  (0.0855039); expected 358.6 (0.02)
Passed bias filter:                      683  (0.0380947); expected 358.6 (0.02)
Passed Vit filter:                        75  (0.00418317); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 2207.49
//
Query:       EPX70809.1  [L=265]
Description: cruciform cutting endonuclease Cce1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.4e-34  117.6   1.5    1.4e-29  103.7   0.0    2.3  2  Ydc2-catalyt  Mitochondrial resolvase Ydc2 / RNA splicing MRS
    0.00025   21.2   0.2       0.19   11.9   0.0    3.0  2  Pox_A22       Poxvirus A22 protein
     0.0014   18.7   0.1     0.0029   17.7   0.1    1.4  1  Terminase_6C  Terminase RNaseH-like domain
     0.0015   18.2   0.9     0.0041   16.8   0.9    1.7  1  SAP           SAP domain
  ------ inclusion threshold ------
      0.015   15.6   0.0      0.027   14.7   0.0    1.4  1  OrfB_IS605    Probable transposase


Domain annotation for each model (and alignments):
>> Ydc2-catalyt  Mitochondrial resolvase Ydc2 / RNA splicing MRS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.7   0.0     4e-33   1.4e-29       1     198 [.      42     207 ..      42     225 .. 0.92
   2 !   12.7   0.4   2.1e-05     0.077     254     277 ..     227     250 ..     221     253 .. 0.90

  Alignments for each domain:
  == domain 1  score: 103.7 bits;  conditional E-value: 4e-33
                   EEEEEE-STTEEEEEEEE.......-TTS-EEEEEEEEE-TT...................SS-TT--------SHHHHHHHHHHHHHHHHHHH--S CS
  Ydc2-catalyt   1 IlSIDmGikNlAfaklkvekkskkakekelptlnawkklnlsellstsaeeskseeeeeskskektkekekesfspdalaelAykLvselllaykPt 97 
                   + SID+GikN+A++  +        +e  ++ +++w + +l+                  + ++    k+ e+++p++la+lA ++ ++l+++ +P+
    EPX70809.1  42 VISIDLGIKNFAYCLASR-------TEGAKVNIHEWAREDLT------------------SPTNGLGIKWIEDYQPQYLARLAFQIYTTLTSRFRPS 113
                   68************9999.......99***************..................799999******************************* PP

                   EEEEEE----T.TT--HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---..EEEEE-CCHHHHHHH...........HHH-----------HHHHHH CS
  Ydc2-catalyt  98 hvlIErQRfRsgggsavlewtlrvnvLEgmLyAvlytlkqesegkkaks..vvigvePkrvvnYWleeessesstkekkkkkksskekKkvkidlvg 192
                   ++l+E QR Rs g +++ ewtlrvn +E mL+  + + ++++  +++ s   +++  P++v++Y     +          + +s++++K+ +++l+ 
    EPX70809.1 114 IILLEHQRYRS-GIKTIPEWTLRVNAIEAMLHCLHVNSQSQDPSESNPSplSLLSLAPRTVYSYVSALPE--------FVNLNSNTKTKATRVKLLN 201
                   ***********.9*************************9999999988899*************998554........4678899999999999999 PP

                   HHHHTT CS
  Ydc2-catalyt 193 swLsae 198
                   ++L+ +
    EPX70809.1 202 EMLNLG 207
                   999765 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 2.1e-05
                   ..HHHHHHHHHHHHHHHHHHHHHH CS
  Ydc2-catalyt 254 ikKlDDLaDsllqgltwlewqanr 277
                   + K DD++D    ++tw+ewq + 
    EPX70809.1 227 SSKKDDMTDAAMMAITWIEWQHKL 250
                   689******************876 PP

>> Pox_A22  Poxvirus A22 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.0   5.2e-05      0.19       3      41 ..      42      79 ..      40     156 .. 0.81
   2 !    5.9   0.1    0.0037        13     115     142 ..     219     244 ..     182     248 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 5.2e-05
     Pox_A22  3 iaaiDiGvknpartllevkdnkarikvldiekldwssdw 41
                +++iD+G+kn a+ l + ++ + ++ + + ++ d++s  
  EPX70809.1 42 VISIDLGIKNFAYCLASRTEGA-KVNIHEWAREDLTSPT 79
                78***********998876655.8999999999998754 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0037
     Pox_A22 115 lfgikdilserkKlDDvADsfnlalkyv 142
                 +f++   ++  +K DD+ D+  +a++++
  EPX70809.1 219 NFELP--VKYSSKKDDMTDAAMMAITWI 244
                 44444..3555799***********997 PP

>> Terminase_6C  Terminase RNaseH-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.1   8.2e-07    0.0029      84     152 ..     184     241 ..     169     242 .. 0.79

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 8.2e-07
                   EESSH..HHHHHHHHHHHHHHHTTSEEEETHHCECCCCCCHCC-EEHCCHHCHCSGCCTCHHHHHHHHH CS
  Terminase_6C  84 vkpepaskdkatrvskvkdliesgrlkvdkgaecaksfealegfhtdlgaerstsaehdDlvdAlsyal 152
                   v+ ++ +k+katrv+ +++++  g++ v++     + ++ +e  +  ++       ++dD+ dA ++a+
    EPX70809.1 184 VNLNSNTKTKATRVKLLNEMLNLGKVSVLND----DALKNFELPVKYSS-------KKDDMTDAAMMAI 241
                   4555556***********************6....77777777666665.......9**********98 PP

>> SAP  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.9   1.1e-06    0.0041       6      32 ..       6      32 ..       4      33 .. 0.91

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 1.1e-06
                HHHHHHHHHHTT--TTS-HHHHHHHHH CS
         SAP  6 VaeLKeeLkkrGLptsGkKaeLieRLk 32
                 + L+ ++k  GL+ +G+Ka+L +R++
  EPX70809.1  6 LQTLQHICKVSGLSRKGRKADLLQRIL 32
                56799********************96 PP

>> OrfB_IS605  Probable transposase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   7.6e-06     0.027      10      35 ..      34      59 ..      14      72 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 7.6e-06
  OrfB_IS605 10 lpkpkgnkaagiDlGinnLatvvted 35
                +p+ ++n++++iDlGi+n+a +  ++
  EPX70809.1 34 TPVYPTNNVISIDLGIKNFAYCLASR 59
                678899**************998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (265 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       598  (0.0333538); expected 358.6 (0.02)
Passed bias filter:                      445  (0.0248201); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 1819.95
//
Query:       EPX70810.1  [L=320]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.9e-18   63.7   0.0    1.9e-17   62.8   0.0    1.5  1  RRM_1      RNA recognition motif. (a.k.a. RRM, RBD, or RNP do
    1.6e-05   24.5   0.0      3e-05   23.6   0.0    1.4  1  RRM_5      RNA recognition motif. (a.k.a. RRM, RBD, or RNP do
  ------ inclusion threshold ------
       0.14   12.1   0.0       0.25   11.3   0.0    1.4  1  Nup35_RRM  Nup53/35/40-type RNA recognition motif
       0.15   12.2   3.4         44    4.5   0.0    3.7  3  PMBR       Pseudomurein-binding repeat


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.8   0.0   4.2e-21   1.9e-17       1      69 [.     106     175 ..     106     176 .. 0.98

  Alignments for each domain:
  == domain 1  score: 62.8 bits;  conditional E-value: 4.2e-21
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrel 69 
                 lfV++++p + +e+L e+Fsk+G + ++++ +d +t+ ++gf+fV   + e+A++A+e +n +++ gr+l
  EPX70810.1 106 LFVTGISPRIHDEDLIEMFSKYGTVMRANILKDpATKEPRGFGFVSLSTVEQADAAIEGMNTREFFGRVL 175
                 8*******************************************************************87 PP

>> RRM_5  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   0.0   6.7e-09     3e-05      14     100 ..      90     181 ..      77     190 .. 0.80

  Alignments for each domain:
  == domain 1  score: 23.6 bits;  conditional E-value: 6.7e-09
       RRM_5  14 atgs.pgaagvaegsVllVyglepdkvnldklFnlfclYgnvervkflk...tkk..etalvqmgdasaveravqHLnnaklfgkrlevalSK 100
                 +t++    +  ++g+ l+V+g+ p ++  + l  +f+ Yg v r  +lk   tk+  +  +v ++   +++ a++ +n  + fg+ l+v+  +
  EPX70810.1  90 DTSWrDSSECENSGTNLFVTGISP-RIHDEDLIEMFSKYGTVMRANILKdpaTKEprGFGFVSLSTVEQADAAIEGMNTREFFGRVLNVQKAR 181
                 455544556667888999****98.5777889****************8444454337899***************************98655 PP

>> Nup35_RRM  Nup53/35/40-type RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   5.6e-05      0.25       4      45 ..     100     141 ..      96     203 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 5.6e-05
                 XXXXX-EEEE-S-GGGHH.HHHHHHHTTS-BSS--CCC----- CS
   Nup35_RRM   4 etsdtsvivFGfpesian.evlehFskfGeiledvqvlklgkg 45 
                 e+s t++ v G ++ i +  ++e Fsk+G+++  + +lk+ + 
  EPX70810.1 100 ENSGTNLFVTGISPRIHDeDLIEMFSKYGTVMRAN-ILKDPAT 141
                 56778889999999887526************997.8887655 PP

>> PMBR  Pseudomurein-binding repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0    0.0098        44       2      19 ..     112     129 ..     111     134 .. 0.83
   2 ?    3.2   1.6     0.025   1.1e+02      16      29 ..     205     219 ..     202     220 .. 0.92
   3 ?    1.6   0.0     0.078   3.5e+02      15      28 ..     237     250 ..     237     251 .. 0.91

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.0098
        PMBR   2 sgkisyeeyldmasrvla 19 
                 s++i+ e++++m+s++  
  EPX70810.1 112 SPRIHDEDLIEMFSKYGT 129
                 7899***********976 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.025
        PMBR  16 rvlaf.iesngrlPn 29 
                 r+ ++ +++n r P+
  EPX70810.1 205 RIRKYpYNRNNRIPS 219
                 99************8 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.078
        PMBR  15 srvlafiesngrlP 28 
                 s++ ++++ ++r P
  EPX70810.1 237 SNIRDYHDTRSRSP 250
                 6899********99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       605  (0.0337442); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 2232.85
//
Query:       EPX70811.1  [L=805]
Description: MS ion channel protein 2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-35  121.9   1.0    5.3e-35  120.9   1.0    1.4  1  MS_channel  Mechanosensitive ion channel
  ------ inclusion threshold ------
      0.078   13.0   0.1       0.24   11.5   0.1    1.8  1  EF-hand_6   EF-hand domain
       0.15   11.7   0.1       0.42   10.3   0.1    1.9  1  EF-hand_1   EF hand
        0.2   11.1   0.0       0.34   10.3   0.0    1.3  1  ROK         ROK family


Domain annotation for each model (and alignments):
>> MS_channel  Mechanosensitive ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.9   1.0   1.2e-38   5.3e-35       7     199 ..     453     641 ..     446     646 .. 0.97

  Alignments for each domain:
  == domain 1  score: 120.9 bits;  conditional E-value: 1.2e-38
                 HHHHHHHHHHHHTTT--SCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTT-.SS-TT-EEESSSEEEEEEEE-SSEEEEEETTSEEEEEEHHHHHTS CS
  MS_channel   7 liivvgilivlsllgvnvsallavlGalglalglalkdlisnlvaGiillfek.pfkiGDlveigdieGtVediglrttkirtfdgrivtiPnsslvts 104
                  + ++gili++s+l  +++++la+ G++ l+l++ + ++ ++l+++i++lf+k pf+i D+v i++ +++V+ ++l+ t +rt++g++v  Pns l t 
  EPX70811.1 453 AVGIIGILIFISFLDTSFATILAAYGTTLLSLSFIFATTAQELMSSIVFLFSKhPFDISDVVVINGTKYEVVTLSLLYTVFRTMSGSTVQAPNSLLNTL 551
                 57899***********************************************99********************************************* PP

                 -EEESSS.SSEEEEEEEEEE-TTS-...HHHHHHHHHHHHHH-TTB-TTS-EEEEEEEE-SSSEEEEEEEEEET...TTHHHHHHHHHHHHHHHH CS
  MS_channel 105 nieNlsresgtrrikvsigvtyssdvkklekvleelkealkekpevlkdkellvvldefgdsslnfevrvfvktvvpeeylsvqseinlrikkil 199
                  ieNl+r s  ++  v+ + ++s+d+k+le++++ l+e++ke+ ++ +    l vld  +++sl+f+v++++k+    +++++  ++++r k ++
  EPX70811.1 552 FIENLRR-SLPQSESVTLSAPFSTDFKQLERLRSLLLEFVKENDRDFRPLLDLSVLDFSALDSLKFTVTFYYKS----NWQNTALQAIRRNKFMC 641
                 *******.****************************************9*************************....99999999999999887 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   5.3e-05      0.24       2      25 ..     398     421 ..     397     427 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 5.3e-05
   EF-hand_6   2 lreaFklfDkdgdGkidaeElrka 25 
                 + ++F+++D+d + +i+ +El ++
  EPX70811.1 398 IISIFEILDRDYSRSITLDELEQF 421
                 789******************997 PP

>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.1   9.3e-05      0.42       2      26 ..     398     422 ..     397     425 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 9.3e-05
                 HHHHHHHHTTTSSSEEEHHHHHHHH CS
   EF-hand_1   2 lkeiFrefDkDgdGkIdfeEfkell 26 
                 +  iF+++D+D +  I+++E+ ++ 
  EPX70811.1 398 IISIFEILDRDYSRSITLDELEQFS 422
                 6689*****************9875 PP

>> ROK  ROK family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   7.6e-05      0.34      37     120 ..     580     664 ..     563     668 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 7.6e-05
                 CHHHHHHHHHHCCCHCCHTEEEEEEEEESSEEETTCCEBSSGGCGCCCCTTHHHHHHHHHTS-E.EEEEHHHHHHHHHHHHCTTT CS
         ROK  37 etlvdaiaelvdeaerkadeliavgigspGlisdksgkivstpnitwenfdlvekleerlnvpv.evenDvnaaalaEavfgask 120
                 e l++ + e+v+e +r ++ l  +++  +  +++ + ++++  +++w+n+ l++   +++ + +  + +Dvn  a++  v+g s 
  EPX70811.1 580 ERLRSLLLEFVKENDRDFRPLLDLSVLDFSALDSLKFTVTFYYKSNWQNTALQAIRRNKFMCGLiNAVRDVNLPAVSDPVLGSSD 664
                 678888999*****************************************************8615889********99998775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (805 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       983  (0.0548274); expected 358.6 (0.02)
Passed bias filter:                      516  (0.0287802); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.71u 0.28s 00:00:00.99 Elapsed: 00:00:00.46
# Mc/sec: 5262.81
//
Query:       EPX70812.1  [L=200]
Description: 40S ribosomal protein S8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      1e-57  194.2   0.7    1.1e-57  194.0   0.7    1.0  1  Ribosomal_S8e  Ribosomal protein S8e


Domain annotation for each model (and alignments):
>> Ribosomal_S8e  Ribosomal protein S8e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  194.0   0.7   6.4e-62   1.1e-57       1     137 []       1     184 [.       1     184 [. 1.00

  Alignments for each domain:
  == domain 1  score: 194.0 bits;  conditional E-value: 6.4e-62
                    XXXBXXCCCSEESSTEEXXXSSXXXCCSBXXXXXXXEESSHEEEEEEETTCEEEEEEESESEEEEEETTTTEEEEEEEEEEECSSSTCHHHHTTC- CS
  Ribosomal_S8e   1 mgisrdskhkrkltGgkakllrkkrkielgrkekatklgaervkvvrvrgGkrkkralrlkkanvthpeekvtkklkIlgVkknpsnneyvrlgvl 96 
                    mgi+rds+hkr+++G+k++++rkkrk+elgr++++t++ga+r+++vrvrgG++k+ralrl+++n+++++e+v+kk++I++V ++psnne+vr+++l
     EPX70812.1   1 MGITRDSRHKRSASGAKRAQYRKKRKFELGRQAANTRIGAKRIHEVRVRGGNQKFRALRLESGNFSWGSEGVAKKTRIIQVAYHPSNNELVRTNTL 96 
                    99********************************************************************************************** PP

                    -TTEEEEEESHH...............................................HHHHHHTTEEEEEEESEHHHHSSEEEEEE CS
  Ribosomal_S8e  97 tKgaiievdvse...............................................LgevtqsgkvvAqvtsrPgqdGcvnavlL 137
                    tK+ai++vd+++                                               +++++++g+++A+v+srPgq+G++++++L
     EPX70812.1  97 TKSAIVQVDAAPfrvwyethygilmggkgkkatptatpkskhvqrklgarvgsskvdpaMESQFAAGRLYACVSSRPGQSGRCDGYIL 184
                    ***************************************************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       418  (0.0233142); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.43
# Mc/sec: 1412.07
//
Query:       EPX70813.1  [L=437]
Description: UB Xdomain protein Ubx2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.5e-18   64.5   0.0    1.4e-17   63.6   0.0    1.4  1  Thioredoxin_7   Thioredoxin-like
    2.6e-16   59.6   0.0    6.5e-16   58.3   0.0    1.7  1  UBX             UBX domain
    4.3e-13   48.8   0.0    7.9e-13   48.0   0.0    1.5  1  UBA_4           UBA-like domain
    4.1e-06   27.2   0.0    1.7e-05   25.2   0.0    2.0  2  Thioredoxin_2   Thioredoxin-like domain
  ------ inclusion threshold ------
      0.024   14.6   0.0      0.047   13.7   0.0    1.4  1  Thioredox_DsbH  Protein of unknown function, DUF255


Domain annotation for each model (and alignments):
>> Thioredoxin_7  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.6   0.0     4e-21   1.4e-17       5      83 .]     163     243 ..     158     243 .. 0.94

  Alignments for each domain:
  == domain 1  score: 63.6 bits;  conditional E-value: 4e-21
                    SHHHHHHHHHHHT--EEEEE--TT-HHHHHHHHHHHH-HHHHH.HHHT-EEEEESS--S-GGG.-TT---....SSEEEEE-T CS
  Thioredoxin_7   5 dldealakaaergkpvlvffgaswcftCqalerdflsdeevkaalaekfvllrvdvterdanileldeqg....vPvvafldp 83 
                    +ld+a+ ka  +++++l++++ s +f+Cq+l+rd++++e+vk++++ +f +l++ ++e+ + + e+++ +    +P+va+ldp
     EPX70813.1 163 TLDQAKMKATYEKRWILINLQTSSSFECQVLNRDLWKSESVKEVIRAHFLFLQLLDDEEPG-M-EFKRFYpvssTPHVAILDP 243
                    689********************************************************99.4.9999777777********9 PP

>> UBX  UBX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.3   0.0   1.8e-19   6.5e-16       5      80 ..     362     435 ..     358     436 .. 0.92

  Alignments for each domain:
  == domain 1  score: 58.3 bits;  conditional E-value: 1.8e-19
                 SEEEEEEEETTSTEEEEEEESSSBHHHHHHHHHHHCCCCCTS.EEEEETTTTEEGGCCCCSBCCCCTTTSCEEEEEE CS
         UBX   5 datrlqiRlpdGsrlvrrFkksdtlesvyeyVdsklfekeep.FqLltsfPrreltksdkktLsdlgllpnstlvle 80 
                  +tr+qiRlp+G r+ rrF ++d +++vy+yV+ +++++e++ F+L t ++ +++  +d kt++d+ +++n++l +e
  EPX70813.1 362 GVTRIQIRLPNGARFIRRFYETDLVRKVYAYVKGNAEGAESQpFSL-TFQRTSLWNLLD-KTIKDA-GIQNTALQFE 435
                 689**********************************999555***.999********9.******.99***99887 PP

>> UBA_4  UBA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.0   0.0   2.2e-16   7.9e-13       2      41 ..       7      46 ..       6      48 .. 0.96

  Alignments for each domain:
  == domain 1  score: 48.0 bits;  conditional E-value: 2.2e-16
       UBA_4  2 eliaqFqaiTGadeekArqlLeannWdLerAislyFdsge 41
                +l+a+F++iT++++ekA+++L ++++dL +A++l+F+sg+
  EPX70813.1  7 NLVATFCSITNSTPEKAQEYLGVADGDLSTAVTLFFESGG 46
                69************************************97 PP

>> Thioredoxin_2  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.0   4.9e-09   1.7e-05       4     105 ..     174     261 ..     171     265 .. 0.91
   2 ?   -1.5   0.1      0.97   3.5e+03      42      67 ..     284     314 ..     273     344 .. 0.66

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 4.9e-09
  Thioredoxin_2   4 ngkpvlvvftdpdCpyCkklkkelkelddvtvrvllfplkpsfepkavaiwcakekkkafkdieenvelarkygvrgtPtivfldgk..eivarlp 97 
                    +++ +l+  +++++  C+ l+++l++ ++v++      ++++  + + ++  ++e+          +e+ r y+v++tP + +ld++  e+v ++ 
     EPX70813.1 174 EKRWILINLQTSSSFECQVLNRDLWKSESVKEV-----IRAH--FLFLQLLDDEEPG---------MEFKRFYPVSSTPHVAILDPRtgERVKQWN 253
                    6889999**************************.....*999..************8.........9***************99999998888888 PP

  Thioredoxin_2  98 Gyvpaeel 105
                      ++++++
     EPX70813.1 254 SGITPTDF 261
                    88777776 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.97
  Thioredoxin_2  42 lkpsfepkavaiwcakekkkafkd.....ie 67 
                    l+p++++ a+a+  +++ +ka+ +      e
     EPX70813.1 284 LGPKSHKPAEAMTEEEQMSKAIAAslgveQE 314
                    6777777777777777777776666555422 PP

>> Thioredox_DsbH  Protein of unknown function, DUF255
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   1.3e-05     0.047      28      86 ..     166     224 ..     157     234 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.3e-05
  Thioredox_DsbH  28 ealekakeedkpillsiGysachWChvmekesfedeevaallnesfvsvkvDreerPdl 86 
                     +a  ka  e++ il+++  s++  C+v++++ ++ e+v +++ ++f+ +++  +e P +
      EPX70813.1 166 QAKMKATYEKRWILINLQTSSSFECQVLNRDLWKSESVKEVIRAHFLFLQLLDDEEPGM 224
                     66778999*****************************************9988998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (437 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       835  (0.0465726); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.41
# Mc/sec: 3177.91
//
Query:       EPX70814.1  [L=314]
Description: STE/STE20/YSK protein kinase Ppk11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.9e-68  228.5   0.0    1.1e-67  228.2   0.0    1.1  1  Pkinase         Protein kinase domain
    2.1e-44  151.8   0.0    2.9e-44  151.3   0.0    1.1  1  Pkinase_Tyr     Protein tyrosine kinase
    8.1e-06   25.4   0.1       0.01   15.2   0.1    2.7  2  Kinase-like     Kinase-like
      0.001   18.0   0.0     0.0013   17.5   0.0    1.1  1  Pkinase_fungal  Fungal protein kinase
  ------ inclusion threshold ------
      0.055   12.4   0.0        3.5    6.5   0.0    2.1  2  Haspin_kinase   Haspin like kinase domain
      0.058   12.7   0.0        0.1   12.0   0.0    1.3  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
       0.12   12.3   0.0       0.78    9.6   0.0    2.1  2  APH             Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  228.2   0.0   4.3e-71   1.1e-67       3     264 .]       8     258 ..       6     258 .. 0.93

  Alignments for each domain:
  == domain 1  score: 228.2 bits;  conditional E-value: 4.3e-71
                 EEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHHHH CS
     Pkinase   3 kleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseeeak 101
                 +le +G+GsfG+V+ka++ et+k vA+K+++ + ++++  ++++rEi++l  l++p+i r++e+f + ++l++ +ey++gg+ ++ll++ g+++e+ + 
  EPX70814.1   8 DLELIGQGSFGSVFKAINVETSKPVALKVVDLDATTDQI-ESLTREINFLIGLNSPYITRYFESFLDGTRLWISMEYCDGGSCTELLKTVGKFPEQVIA 105
                 6799*****************************999988.59********************************************************* PP

                 HHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.BCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-STTT CS
     Pkinase 102 kiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.ltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgkppfsg 199
                 +i++++le+l ylH +g +HrD+K +NiL  ++ge+K++DFG++ +l++  +  ++fvgt+ ++APEv+k+++y +k+D+WslG++ +el +g+pp+s 
  EPX70814.1 106 EILRNMLEALVYLHGQGKMHRDIKAANILTTQDGEVKLADFGVSGQLQNFYDkNDDFVGTPFWMAPEVVKQTGYNAKADIWSLGITAFELANGEPPYS- 203
                 *************************************************988799*******************************************. PP

                 SSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 200 ekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                           ++ ++ +l i  +    +  +s++s+ + d+++ +lkk+p++R++  +ll+h+++
  EPX70814.1 204 ---------GIHPMKVLLLIP-KHAPPSLDRSSFSPAFCDFVDLCLKKNPQERPSPLKLLEHKFI 258
                 .........455533333333.446677788999*****************************96 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.3   0.0   1.1e-47   2.9e-44       5     255 ..      10     252 ..       8     256 .. 0.95

  Alignments for each domain:
  == domain 1  score: 151.3 bits;  conditional E-value: 1.1e-47
                  EEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBH CS
  Pkinase_Tyr   5 kklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekekltl 102
                  + +G+G+fG+V+++       +++  Va+K+++ +at ++ e+l++e++++  l+ p i ++    +++ +l+i +ey++gG+  + L++    k+  
   EPX70814.1  10 ELIGQGSFGSVFKAINV----ETSKPVALKVVDLDATTDQIESLTREINFLIGLNSPYITRYFESFLDGTRLWISMEYCDGGSCTELLKTV--GKFPE 101
                  579************99....8999****************************************************************98..99*** PP

                  HHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHHHHHHT CS
  Pkinase_Tyr 103 kdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEift 200
                  + + ++  ++ +++ yL+ +  +Hrd+ a N+L +++  vk++DfG++ ++  ++ y k+++      WmapE++k++ ++ k+D+Ws G++ +E+++
   EPX70814.1 102 QVIAEILRNMLEALVYLHGQGKMHRDIKAANILTTQDGEVKLADFGVSGQL--QNFYDKNDDFVGTPFWMAPEVVKQTGYNAKADIWSLGITAFELAN 197
                  ***************************************************..88888899999999*****************************99 PP

                  TSSGTTTTSHHHHHHHHH.HTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHH CS
  Pkinase_Tyr 201 lgespypglkneevlekl.kegkrlekpekcpeelyelmkkcweedpeeRptfsel 255
                   ge py+g+++++vl  + k+       ++ ++++ +++  c++++p+eRp+  +l
   EPX70814.1 198 -GEPPYSGIHPMKVLLLIpKHAPPSLDRSSFSPAFCDFVDLCLKKNPQERPSPLKL 252
                  .*****************76677777888899*******************86655 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.0    0.0013       3.3      12      61 ..       4      51 ..       1      72 [. 0.78
   2 !   15.2   0.1     4e-06      0.01     155     254 ..     113     206 ..      90     211 .. 0.72

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0013
  Kinase-like 12 rtlvrgellkkgdrsvvfevkdqetgeplavkvfllpseaskkdlerlke 61
                 + +   el+++g ++ vf++ ++et +p+a+kv  l  +a   ++e l +
   EPX70814.1  4 QHYCDLELIGQGSFGSVFKAINVETSKPVALKVVDL--DATTDQIESLTR 51
                 55666799************************9866..556666666654 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 4e-06
  Kinase-like 155 rlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvl..sevekg.faPpEllgsrggytrknktkmthkldaWqlGlviyriwclklP 249
                      +L+ +g +h ++++ n+l  ++g ++l +f+   +  + +      v    +  pE++ +         t +  k d W lG++++ ++  + P
   EPX70814.1 113 EALVYLHGQGKMHRDIKAANILTTQDGEVKLADFGVSGQLQNFYDKndDFVGTPfWMAPEVVKQ---------TGYNAKADIWSLGITAFELANGEPP 201
                  45569*****************************865555555553103333321355666655.........6677799**********99988777 PP

  Kinase-like 250 ltlat 254
                     + 
   EPX70814.1 202 YSGIH 206
                  76665 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   5.3e-07    0.0013     310     397 ..     106     185 ..      94     188 .. 0.85

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 5.3e-07
  Pkinase_fungal 310 ealrDaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlkgeeHsyrhDL 397
                     e lr+ ++++  L+  +g +HrDi + Nil t     ++ +  L+D+ +  +l++    +++ + +GT+ +ma ev+k++  +   D+
      EPX70814.1 106 EILRNMLEALVYLH-GQGKMHRDIKAANILTT-----QDGEVKLADFGVSGQLQN--FYDKNDDFVGTPFWMAPEVVKQTGYNAKADI 185
                     568999999999**.9999************9.....788999***********5..5555679*************98766666665 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.0    0.0014       3.5     109     142 ..      13      48 ..       1      69 [. 0.77
   2 ?    3.9   0.0    0.0083        21     230     254 ..     125     149 ..     106     162 .. 0.92

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0014
  Haspin_kinase 109 seklssevyqtke..kdkevvlKviplevledvtis 142
                    ++++++ v+++ +  ++k+v+lKv+ l++  d + s
     EPX70814.1  13 GQGSFGSVFKAINveTSKPVALKVVDLDATTDQIES 48 
                    8999*******999899**********988876655 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.0083
  Haspin_kinase 230 HRdLhldniLvdknlnvtlidlkls 254
                    HRd++  niL  + ++v l d+ +s
     EPX70814.1 125 HRDIKAANILTTQDGEVKLADFGVS 149
                    *********************9876 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   3.9e-05       0.1     109     167 ..      93     147 ..      85     163 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 3.9e-05
         Kdo 109 lakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDld 167
                 l++  +++e++ +++l++   +   lh  g +H+d+ a nil  q++    e+ l D+ 
  EPX70814.1  93 LKTVGKFPEQVIAEILRNMLEALVYLHGQGKMHRDIKAANILTTQDG----EVKLADFG 147
                 5555557788888888888899999********************99....88888885 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.0   0.00031      0.78     130     187 ..      81     141 ..      68     150 .. 0.74
   2 ?   -1.1   0.0      0.58   1.5e+03     194     211 ..     223     240 ..     222     256 .. 0.73

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00031
                 HCHHHCCCGCCTCCHHHHHHHHHHHHHHHH--S....SS-EEEE-SS-SGGGEEEC..TTEE CS
         APH 130 esatarllaselldlleeleeqvlaalaallpg....elptvllHgDlhpgNllvdpddgrv 187
                 ++++ ++   ell+ + ++ eqv+a+++++++        ++ +H+D++  N+l + +dg+v
  EPX70814.1  81 MEYCDGGSCTELLKTVGKFPEQVIAEILRNMLEalvyLHGQGKMHRDIKAANILTT-QDGEV 141
                 55666344444555589999999999999999888888899999************.54554 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.58
                 TT-EEEECCHHHHCCHHH CS
         APH 194 edaglgpplyDlavllrs 211
                 ++++ +p+ +D+++l+  
  EPX70814.1 223 DRSSFSPAFCDFVDLCLK 240
                 77899*********9943 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       489  (0.0272742); expected 358.6 (0.02)
Passed bias filter:                      463  (0.0258241); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.48u 0.29s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2198.74
//
Query:       EPX70815.1  [L=199]
Description: V-type ATPase V0 subunit C [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-25   87.9  29.5    4.9e-13   49.2  12.7    2.5  2  ATP-synt_C  ATP synthase subunit C
  ------ inclusion threshold ------
       0.74    9.1   2.7       0.44    9.9   0.4    1.8  2  SLATT_5     SMODS and SLOG-associating 2TM effector domain fa


Domain annotation for each model (and alignments):
>> ATP-synt_C  ATP synthase subunit C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.2  12.7   5.5e-17   4.9e-13       1      59 [.      48     106 ..      48     107 .. 0.98
   2 !   44.3   8.8   1.8e-15   1.6e-11       3      59 ..     134     190 ..     132     191 .. 0.97

  Alignments for each domain:
  == domain 1  score: 49.2 bits;  conditional E-value: 5.5e-17
                 HHHHHHH.GGGHHHHHHHHHHHHHHHHHHHHSGHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  ATP-synt_C   1 lgaglavGlsalgsGigiGkagsagiravarnpklftksliilafaeaialygLivali 59 
                 lg++ +v+++ +g+++gi ++gs+++++ ++ p++ tk li ++f+e++a+y Li+a++
  EPX70815.1  48 LGIASCVAFGIIGAAWGIFICGSSILGGAVKAPRIKTKNLISIIFCEVVAIYSLIIAIV 106
                 799******************************************************97 PP

  == domain 2  score: 44.3 bits;  conditional E-value: 1.8e-15
                 HHHHH.GGGHHHHHHHHHHHHHHHHHHHHSGHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  ATP-synt_C   3 aglavGlsalgsGigiGkagsagiravarnpklftksliilafaeaialygLivali 59 
                  gl vGl+ l +Gi++G++gs+++ a a++++lf+k+l++ +f  +++l+gLiv+l+
  EPX70815.1 134 GGLTVGLCNLICGICVGITGSSAALADAQDASLFVKVLVVEIFGSVLGLFGLIVGLL 190
                 59*****************************************************98 PP

>> SLATT_5  SMODS and SLOG-associating 2TM effector domain family 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.4   4.9e-05      0.44      23      61 ..      79     123 ..      76     144 .. 0.74
   2 ?   -1.7   0.1      0.17   1.5e+03      64      85 ..     173     194 ..     157     196 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 4.9e-05
     SLATT_5  23 aeRlrrknklstfslsllSvylivlslls......nkssestine 61 
                 a R+++kn +s++++ ++++y+++++++       ++ s+  +++
  EPX70815.1  79 APRIKTKNLISIIFCEVVAIYSLIIAIVFsgklnaVSASHLYSKS 123
                 679***********************9985555444444444444 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.17
     SLATT_5  64 ldflsiilSilvlvisllessk 85 
                 +++++ +l+ + l+++ll+++k
  EPX70815.1 173 VEIFGSVLGLFGLIVGLLVGGK 194
                 5667788888888888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       763  (0.0425568); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 1251.39
//
Query:       EPX70816.1  [L=360]
Description: tRNA 2'-phosphotransferase Tpt1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.9e-64  214.7   0.1    1.5e-63  214.1   0.1    1.2  1  PTS_2-RNA  RNA 2'-phosphotransferase, Tpt1 / KptA family
    1.3e-08   34.4   6.4    2.5e-08   33.5   6.4    1.5  1  Yae1_N     Essential protein Yae1, N terminal
  ------ inclusion threshold ------
       0.81    9.9   5.9       0.13   12.4   0.7    2.1  2  DUF5636    Family of unknown function (DUF5636)


Domain annotation for each model (and alignments):
>> PTS_2-RNA  RNA 2'-phosphotransferase, Tpt1 / KptA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  214.1   0.1   2.5e-67   1.5e-63       4     181 .]      26     197 ..      23     197 .. 0.96

  Alignments for each domain:
  == domain 1  score: 214.1 bits;  conditional E-value: 2.5e-67
   PTS_2-RNA   4 vqlskaLsyiLRhgaekegLkiredGyvkvedlLelpklkslkvtleeikevVesndKqRFelvelee.lliranqghsikkvesselllepiesaeel 101
                 +++skaLs++LRh+a++ gL++r+dG+v+v+dlL+lp++k+  ++l+ +k++V++n+K+RF+l+e+e+ lliranqgh+i +v   e  +++ie+a+ l
  EPX70816.1  26 IRFSKALSKVLRHTAQSNGLQLRPDGFVSVDDLLRLPQFKN--LSLQMLKKIVDENEKKRFSLIEMEGkLLIRANQGHTIRTV---EVPMTRIEDASLL 119
                 689*************************************9..*********************99888**********8654...5569*****9999 PP

   PTS_2-RNA 102 pevvvHgTylkawesilasggLkrmsrnhihlatglpgekevisgmrksaevliyidvekaladgikfyvsengviLteG 181
                 p+ vvHgT  + w++i  ++gL+rm+rnhih+atgl+ge +v+sg+rks++++iyidv ka++++++fy sengviLteG
  EPX70816.1 120 PK-VVHGTRKELWKTIS-KEGLSRMKRNHIHCATGLFGEPGVVSGIRKSCTLYIYIDVLKAMQHNVEFYQSENGVILTEG 197
                 99.**************.99***********************************************************9 PP

>> Yae1_N  Essential protein Yae1, N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.5   6.4   4.3e-12   2.5e-08       1      37 [.     272     308 ..     272     310 .. 0.97

  Alignments for each domain:
  == domain 1  score: 33.5 bits;  conditional E-value: 4.3e-12
      Yae1_N   1 GYreGiaeGkeqglqeGfdeGyqeGaqlGlelGqilG 37 
                 GY eGi +Gk + +q+Gfd+Gy +Ga  G+e+G+ lG
  EPX70816.1 272 GYSEGIVKGKMEVAQSGFDDGYAQGAIYGYEVGKKLG 308
                 9********************************9988 PP

>> DUF5636  Family of unknown function (DUF5636)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.7   2.2e-05      0.13      37      86 ..      12      67 ..       1      82 [. 0.76
   2 ?   -0.7   0.4      0.24   1.4e+03      46      67 ..     320     341 ..     304     357 .. 0.64

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 2.2e-05
                HHCT--TTSHHH.....HHHHHHHHHHHHHHTT--S.S-EEECCG----HHHHHHH CS
     DUF5636 37 kefnkkpkekkk.....sklLrtfleeweaaagfnk.gtsktiskdflskedFqel 86
                k  n k+k+++      sk+L+++l   ++++g++  ++     +d l+ ++F++l
  EPX70816.1 12 KTHNGKKKQEQDpmirfSKALSKVLRHTAQSNGLQLrPDGFVSVDDLLRLPQFKNL 67
                33333333333359999*****************9999999989*********985 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.24
                 HHHHHHHHHHHHHHHHHTT--S CS
     DUF5636  46 kkksklLrtfleeweaaagfnk 67 
                 +k++ lL++ lee+e++  f k
  EPX70816.1 320 EKEQVLLQNQLEELEQQSEFSK 341
                 3345666666666666666644 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       725  (0.0404373); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 2479.67
//
Query:       EPX70817.1  [L=242]
Description: RNA-binding protein Rbp28 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.5e-05   23.0   0.0    0.00017   21.6   0.0    1.6  2  KH_8      Krr1 KH1 domain
  ------ inclusion threshold ------
        0.4   10.5   1.9       0.47   10.3   0.2    1.9  2  KH_1      KH domain


Domain annotation for each model (and alignments):
>> KH_8  Krr1 KH1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.2       1.4   1.3e+04      39      50 ..      17      28 ..      16      30 .. 0.76
   2 !   21.6   0.0   1.9e-08   0.00017       7      79 ..      70     143 ..      66     145 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 1.4
        KH_8 39 erslkvsTtekT 50
                e  +++ Tt +T
  EPX70817.1 17 EDDVMIDTTGNT 28
                566889999988 PP

  == domain 2  score: 21.6 bits;  conditional E-value: 1.9e-08
        KH_8   7 fpkyrekylkeveekikkll.eekklklevdlkerslkvsTtekTrDPyiilkardlikLisrgvpleeakkvl 79 
                  p +r + l++v++k+   l e+  l++++++k r ++++  + T DP  + k+ d+++  + g +++ a  +l
  EPX70817.1  70 IPPHRMTPLRNVWPKLYPPLvEHLFLQVRMNVKARAVELRESKATSDPGALQKGMDFVQAFALGFDVDDAIALL 143
                 689999********99987758889************************************9999999997665 PP

>> KH_1  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1      0.35   3.2e+03      43      55 ..      15      30 ..       8      34 .. 0.57
   2 ?   10.3   0.2   5.3e-05      0.47       9      64 ..     168     215 ..     165     217 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.35
                .T.-EEEE..EE.SHH CS
        KH_1 43 sderevti..sG.spe 55
                ++e+ v+i  +G + e
  EPX70817.1 15 GNEDDVMIdtTGnTTE 30
                3555555554886665 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 5.3e-05
                 GHHHHHHTGGGHHHHHHHHHHT-EEEEESSTT...T.-EEEEEESHHHHHHHHHHH CS
        KH_1   9 slvgriIGkgGsnIkeIreetgakIkvpksedegsderevtisGspeavekAkeli 64 
                 + +gri G  G++   I++ + ++I++  +       + ++i G   +   Ak+++
  EPX70817.1 168 RAIGRIAGQAGKTKFAIENASRTRIVLA-D-------SKIHILGGYSNLRIAKDAV 215
                 679****************99*****65.3.......4699999666698888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       314  (0.0175135); expected 358.6 (0.02)
Passed bias filter:                      290  (0.0161749); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1685.05
//
Query:       EPX70818.1  [L=168]
Description: hypothetical protein SOCG_04139 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    0.00043   20.7   4.8    0.00048   20.5   4.8    1.1  1  MMR1            Mitochondrial Myo2 receptor-related protein
  ------ inclusion threshold ------
      0.026   14.8   0.5      0.068   13.5   0.2    1.8  2  DUF4164         Domain of unknown function (DUF4164)
       0.05   13.8   5.6        1.1    9.4   0.1    2.1  2  GCN5L1          GCN5-like protein 1 (GCN5L1)
      0.064   13.2   0.1       0.15   12.0   0.1    1.5  1  DUF4024         Protein of unknown function (DUF4024)
      0.078   12.9   6.5        0.8    9.5   6.5    2.1  1  Apolipoprotein  Apolipoprotein A1/A4/E domain
       0.12   11.4   9.9      0.066   12.3   0.6    2.1  2  TelA            Toxic anion resistance protein (TelA)
       0.13   12.5   6.4        1.3    9.3   0.5    2.8  3  BLOC1_2         Biogenesis of lysosome-related organelles com
       0.14   12.1   3.0        1.3    8.9   0.1    3.0  2  DUF919          Nucleopolyhedrovirus protein of unknown funct
       0.16   12.1  12.8        5.8    7.1   2.1    2.9  3  Cor1            Cor1/Xlr/Xmr conserved region
       0.18   12.3  10.5       0.88   10.1   0.6    2.7  2  ZapB            Cell division protein ZapB
       0.32   11.2  10.6        6.1    7.1  10.5    2.1  1  Jnk-SapK_ap_N   JNK_SAPK-associated protein-1
       0.38   11.2   3.9        1.6    9.2   0.5    2.5  2  H-kinase_dim    Signal transducing histidine kinase, homodime
       0.46   10.6   3.7       0.85    9.7   1.0    2.5  2  Exonuc_VII_S    Exonuclease VII small subunit
       0.47   10.3   8.8       0.44   10.4   1.8    2.0  2  STAT_alpha      STAT protein, all-alpha domain
       0.65   10.4   4.4       0.47   10.8   1.1    2.1  2  LPP20           LPP20 lipoprotein
       0.67    9.7   9.4        1.4    8.7   2.4    2.0  2  FAM184          Family with sequence similarity 184, A and B
       0.74    9.8   5.7          1    9.3   0.5    2.2  2  DUF4446         Protein of unknown function (DUF4446)
       0.96    9.3  12.5       0.46   10.4   2.4    2.1  2  CortBP2         Cortactin-binding protein-2
        2.5    7.4  13.2        2.9    7.2   2.4    2.1  2  GAS             Growth-arrest specific micro-tubule binding
        2.7    8.3   9.1        1.2    9.4   1.7    2.3  2  Spc24           Spc24 subunit of Ndc80
        3.3    8.4   9.4        1.7    9.3   0.7    3.0  2  YabA            Initiation control protein YabA
        3.6    7.4   5.9        1.8    8.4   0.6    2.3  2  CHD5            CHD5-like protein
          4    8.2   8.8        6.4    7.6   2.1    2.7  2  Occludin_ELL    Occludin homology domain
        9.1    6.5   8.1        8.5    6.6   1.3    2.1  2  Fib_alpha       Fibrinogen alpha/beta chain family


Domain annotation for each model (and alignments):
>> MMR1  Mitochondrial Myo2 receptor-related protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   4.8   6.4e-07   0.00048     101     220 ..       8     127 ..       1     151 [. 0.72

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 6.4e-07
        MMR1 101 etleqlre.eksqqksksaekekqkrsvaakseqesekveeleksksereisetssaiSestlleledle..tteaetlnpnnsveekkpavektksps 196
                 e+l  l+  +k q++  s++++++ +s+++k+ qe + +++++ks++    s++  ++S+ tll++ +l   + e++tl++     +++++++++ +  
  EPX70818.1   8 EQLAFLECmGKLQKELDSSFQRYERLSRTTKDLQE-QLNQAKSKSQQSIRGSSSGASYSDETLLPSMELIelRAENATLKQD--ARNFEQISNNYAKGM 103
                 5555553358889999******************9.4444444444444566666679******998765255555555555..555556999999999 PP

        MMR1 197 krivStssvassleevelnelpkd 220
                 + +v   s++++ ++++l+ ++++
  EPX70818.1 104 EEMVGFVSSYTEKMNMKLKTVHDE 127
                 99999999999*9***99999877 PP

>> DUF4164  Domain of unknown function (DUF4164)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.2     9e-05     0.068      50      81 ..      18      49 ..      13      55 .. 0.93
   2 ?   -2.3   0.0       7.3   5.5e+03      36      36 ..     145     145 ..     113     165 .. 0.63

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 9e-05
     DUF4164 50 RLaeeLdqaearaarleevnrEvsrrLkaaie 81
                +L +eLd++  r +rl++++++++++L+ a  
  EPX70818.1 18 KLQKELDSSFQRYERLSRTTKDLQEQLNQAKS 49
                799*************************9975 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 7.3
     DUF4164  36 e 36 
                 +
  EPX70818.1 145 K 145
                 2 PP

>> GCN5L1  GCN5-like protein 1 (GCN5L1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.1    0.0015       1.1      35      73 ..      16      54 ..       9      63 .. 0.90
   2 ?    6.1   1.8     0.016        12      11      94 ..      77     160 ..      72     166 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0015
      GCN5L1 35 vdklnsgvaeayanqkklekeakalqanvakfakqtdqW 73
                + kl+++++ ++++ ++l   +k+lq+++++ + +++q 
  EPX70818.1 16 MGKLQKELDSSFQRYERLSRTTKDLQEQLNQAKSKSQQS 54
                7799****************************9999985 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.016
      GCN5L1  11 erreeqekakkeaiesaaaltealvdklnsgvaeayanqkklekeakalqanvakfakq.tdqWlalvesfnsalkeiGDvenWa 94 
                 e+r+e+ ++k++a ++ ++++++  + +++ v  + +  +k+++++k ++ +  k++ + +++ l+  ++ +++++ +  v+ W 
  EPX70818.1  77 ELRAENATLKQDA-RNFEQISNNYAKGMEEMVGFVSSYTEKMNMKLKTVHDEYLKMYDTlAAERLSFSKKNQRDVQALEKVKGWL 160
                 6789999999999.69999999999999999999999999999999999999888776525678888888888899998888885 PP

>> DUF4024  Protein of unknown function (DUF4024)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1    0.0002      0.15      11      28 ..       4      21 ..       3      23 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.0002
     DUF4024 11 LFRDEnvnFLFCiGFmqK 28
                L RDE   FL C+G +qK
  EPX70818.1  4 LNRDEQLAFLECMGKLQK 21
                77***************9 PP

>> Apolipoprotein  Apolipoprotein A1/A4/E domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   6.5    0.0011       0.8      70     149 ..      18     104 ..      14     165 .. 0.59

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0011
                     HHHHHCCHHHHHHHHHHHHCHHCCHHCHCCHCHHHHHHHHHH...HHHHHHHHCHHHHHHH.....HHHHHHHHHHHH-----..--- CS
  Apolipoprotein  70 elrqrlapyteelrerlaadaeelqeqlavyaeelrerlerh...vealkarlapyveelr.....qklaerleelkeslaphaeeve 149
                     +l+++l++  +++ erl++ +++lqeql + + + +++++ +   ++   ++l p +e +      + l++ + ++++  +++a+ +e
      EPX70818.1  18 KLQKELDSSFQRY-ERLSRTTKDLQEQLNQAKSKSQQSIRGSssgASYSDETLLPSMELIElraenATLKQDARNFEQISNNYAKGME 104
                     6899999999999.9***************9999666666553332233333333333222333332333333333333333333333 PP

>> TelA  Toxic anion resistance protein (TelA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.6   8.8e-05     0.066      65     116 ..       4      55 ..       1      60 [. 0.88
   2 ?    3.2   3.1     0.049        37     104     173 ..      77     155 ..      73     165 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 8.8e-05
        TelA  65 lkeekklgllplfkkaknkieklfakYekaeeqidkIvkeLekgqdellkdn 116
                 l+ +++l +l+ ++k+++++++ f++Ye++++   ++ ++L++++++ ++++
  EPX70818.1   4 LNRDEQLAFLECMGKLQKELDSSFQRYERLSRTTKDLQEQLNQAKSKSQQSI 55 
                 444456799*************************************999887 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.049
        TelA 104 eLekgqdellkdnaaLdqlyeknleyfkeL....ekyiaaGekkleeldekllpeleakaeas.....gdpedaqalrd 173
                 eL+++  +l++d ++++q  ++  + ++e+    + y    ++kl+ + +++l+ ++  a++      +++ d+qal++
  EPX70818.1  77 ELRAENATLKQDARNFEQISNNYAKGMEEMvgfvSSYTEKMNMKLKTVHDEYLKMYDTLAAERlsfskKNQRDVQALEK 155
                 7889999999999999999999999999874444678888888899999999998888888532222244455555544 PP

>> BLOC1_2  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.5    0.0018       1.3      22      59 ..      16      53 ..       1      56 [. 0.81
   2 ?    5.5   0.1     0.028        21      50      96 .]      75     122 ..      65     122 .. 0.86
   3 ?    0.7   0.2      0.86   6.4e+02      30      59 ..     122     151 ..     114     159 .. 0.70

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.0018
     BLOC1_2 22 yklLeklNeaasekykklkdvaaslekkleklnekyee 59
                +  L+k   ++ ++y+ l++ +++l+++l++ ++k+++
  EPX70818.1 16 MGKLQKELDSSFQRYERLSRTTKDLQEQLNQAKSKSQQ 53
                5567777788999********************99875 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.028
     BLOC1_2  50 leklnekyeelqpylqqidqiekqvte.LeeavseLDeyskeLEakfk 96 
                 l +l++++++l++  ++ +qi ++ ++ +ee+v  + +y+ ++  k+k
  EPX70818.1  75 LIELRAENATLKQDARNFEQISNNYAKgMEEMVGFVSSYTEKMNMKLK 122
                 6688999999999999999999987644*****999999999998886 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.86
     BLOC1_2  30 eaasekykklkdvaaslekkleklnekyee 59 
                 ++++ +y k+ d +a  + +++k n+++ +
  EPX70818.1 122 KTVHDEYLKMYDTLAAERLSFSKKNQRDVQ 151
                 567788889988888888888888887765 PP

>> DUF919  Nucleopolyhedrovirus protein of unknown function (DUF919)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.1    0.0017       1.3      18      43 ..      21      46 ..       9      54 .. 0.81
   2 ?    1.8   0.4      0.29   2.2e+02      28      44 ..     138     154 ..     112     156 .. 0.63

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0017
      DUF919 18 rkltiksqHfErlkkitKnpkElqdl 43
                ++l    q +Erl + tK+ +E  ++
  EPX70818.1 21 KELDSSFQRYERLSRTTKDLQEQLNQ 46
                667777899***********996554 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.29
      DUF919  28 ErlkkitKnpkElqdle 44 
                 Erl    Kn++ +q le
  EPX70818.1 138 ERLSFSKKNQRDVQALE 154
                 55666666666666666 PP

>> Cor1  Cor1/Xlr/Xmr conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   4.0    0.0089       6.6      39      91 ..       4      56 ..       1      89 [. 0.89
   2 ?    2.8   0.0      0.17   1.3e+02      87     107 ..      86     106 ..      78     108 .. 0.85
   3 ?    7.1   2.1    0.0078       5.8      84     123 ..     112     151 ..      86     157 .. 0.68

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0089
        Cor1 39 lkeeysqqfltlfqqwetdvqkvkeqeeklsnlfqqqqkllqqarvvqeqrlk 91
                l+++ +  fl+ + +++++++   + +e+ls+ +++ q+ l+qa++  +q ++
  EPX70818.1  4 LNRDEQLAFLECMGKLQKELDSSFQRYERLSRTTKDLQEQLNQAKSKSQQSIR 56
                666667889*************************************9999886 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.17
        Cor1  87 eqrlkeikqlydqFlksledL 107
                 +q  +++ q+++++ k++e++
  EPX70818.1  86 KQDARNFEQISNNYAKGMEEM 106
                 56778999**********997 PP

  == domain 3  score: 7.1 bits;  conditional E-value: 0.0078
        Cor1  84 vvqeqrlkeikqlydqFlksledLekehekllsdeqselk 123
                 +  e++  ++k+++d++lk  ++L  e+ ++ ++ q +++
  EPX70818.1 112 SYTEKMNMKLKTVHDEYLKMYDTLAAERLSFSKKNQRDVQ 151
                 344444457899999****999999999999888887765 PP

>> ZapB  Cell division protein ZapB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.6    0.0012      0.88       4      43 ..      14      53 ..      11      59 .. 0.64
   2 ?    5.9   3.5     0.023        17      24      46 ..      72     101 ..      66     166 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.0012
        ZapB  4 elLeqLEskiqkaidtitlLqmeieeLkeeneelkeenre 43
                e + +L++  ++  +++++L+   ++L+e+ ++ k++ ++
  EPX70818.1 14 ECMGKLQKELDSSFQRYERLSRTTKDLQEQLNQAKSKSQQ 53
                5556666666666666666666666666666666666554 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.023
        ZapB  24 qmeieeLkeeneelkeenrele.......e 46 
                 +me+ eL++en++lk+ +r+ e       +
  EPX70818.1  72 SMELIELRAENATLKQDARNFEqisnnyaK 101
                 589999999999999999998865544440 PP

>> Jnk-SapK_ap_N  JNK_SAPK-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1  10.5    0.0081       6.1      34     149 ..      12     158 ..       9     162 .. 0.90

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0081
  Jnk-SapK_ap_N  34 vLElLeslasrneeeeaeleelreeleqLeteyerekelrkrae...............................eeleeiedqweeerkelqekv 98 
                     LE++ +l ++ ++  ++ e+l++++++L++++++ k++++++                                ++  ++e+  ++ +k ++e+v
     EPX70818.1  12 FLECMGKLQKELDSSFQRYERLSRTTKDLQEQLNQAKSKSQQSIrgsssgasysdetllpsmelielraenatlkQDARNFEQISNNYAKGMEEMV 107
                    699999999999999999*************999999999888899999********************999999888888888888888888888 PP

  Jnk-SapK_ap_N  99 eqleeenrelelkaknaadqlsrleekeaelkkeysklheretellkklke 149
                      + + ++++++k+k ++d+  ++ ++ a ++ + sk+++r+ + l+k k 
     EPX70818.1 108 GFVSSYTEKMNMKLKTVHDEYLKMYDTLAAERLSFSKKNQRDVQALEKVKG 158
                    88888888999999****************999999999999999999875 PP

>> H-kinase_dim  Signal transducing histidine kinase, homodimeric domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.5    0.0022       1.6      34      65 ..       9      43 ..       4      47 .. 0.78
   2 ?    2.9   0.4      0.19   1.4e+02      41      60 ..      78      97 ..      43     112 .. 0.66

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.0022
  H-kinase_dim 34 efrfenglkasvtelksslqnlgr...isgeLQeg 65
                  +++f +++ ++ +el ss+q+ +r    +++LQe+
    EPX70818.1  9 QLAFLECMGKLQKELDSSFQRYERlsrTTKDLQEQ 43
                  566778899999999999998775333889***97 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.19
  H-kinase_dim 41 lkasvtelksslqnlgrisg 60
                  l+a +  lk+ ++n+++is+
    EPX70818.1 78 LRAENATLKQDARNFEQISN 97
                  33444445555555555554 PP

>> Exonuc_VII_S  Exonuclease VII small subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   1.0    0.0011      0.85      21      49 ..      22      50 ..      14      53 .. 0.92
   2 ?    0.3   0.1         1   7.7e+02      15      34 ..      85     104 ..      75     106 .. 0.75

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.0011
  Exonuc_VII_S 21 sLeeslklyeeGvkLlkeCekkLdeaeqk 49
                  +L+ s++ ye+  +  k ++++L++a+ k
    EPX70818.1 22 ELDSSFQRYERLSRTTKDLQEQLNQAKSK 50
                  69************************988 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 1
  Exonuc_VII_S  15 LEsgelsLeeslklyeeGvk 34 
                   L ++    e++ + y +G++
    EPX70818.1  85 LKQDARNFEQISNNYAKGME 104
                   55666667899999999998 PP

>> STAT_alpha  STAT protein, all-alpha domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.8     0.044        33      23      65 ..      14      55 ..       7      66 .. 0.75
   2 ?   10.4   1.8   0.00059      0.44       7      98 ..      74     164 ..      69     166 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.044
  STAT_alpha 23 rkLedeqeeFdfqyqelqkleqeraesekkelkkqkellqqml 65
                +++ ++q e+d  +q +++l + +++  +++l+++k + qq++
  EPX70818.1 14 ECMGKLQKELDSSFQRYERL-SRTTKDLQEQLNQAKSKSQQSI 55
                56777888888888888888.4445555555888888888875 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00059
  STAT_alpha   7 rleelrskvqeteqdirkLedeqeeFdfqyqelqkleqeraesekkelkkqkellqqmlnaLdqkRkelvdklkellnlleslqeklldeeL 98 
                 +l elr+++  ++qd r+ e+    ++  ++e+    ++ +e+ + +lk  ++++ +m  +L  +R ++ +k ++ ++ le++   ll + L
  EPX70818.1  74 ELIELRAENATLKQDARNFEQISNNYAKGMEEMVGFVSSYTEKMNMKLKTVHDEYLKMYDTLAAERLSFSKKNQRDVQALEKVKGWLL-QAL 164
                 67799***************************99994444555555577777777779999**********************99998.666 PP

>> LPP20  LPP20 lipoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   1.1   0.00063      0.47      33      85 ..      13      66 ..       8      75 .. 0.87
   2 ?    0.7   0.1      0.94   7.1e+02      56      79 ..     111     134 ..      73     156 .. 0.58

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00063
       LPP20 33 rdiaeqiqvqvksssstqets.aavqnsettnesvsqvvesvlrgieiveveel 85
                 +   ++q++ +ss++++e++  ++ + +++ ++ ++++++++rg+   +++++
  EPX70818.1 13 LECMGKLQKELDSSFQRYERLsRTTKDLQEQLNQAKSKSQQSIRGSSSGASYSD 66
                566789*************998899999****************9987777765 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.94
       LPP20  56 vqnsettnesvsqvvesvlrgiei 79 
                  +  e+ n+++++v + +l+ +  
  EPX70818.1 111 SSYTEKMNMKLKTVHDEYLKMYDT 134
                 344456666666666666665544 PP

>> FAM184  Family with sequence similarity 184, A and B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.7     0.016        12      92     138 ..      10      56 ..       1      63 [. 0.76
   2 ?    8.7   2.4    0.0018       1.4      46     123 ..      80     157 ..      72     166 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.016
      FAM184  92 aehsqkvvelsreveevkrkFeeklrqfaqlqeqleqekekaLeelr 138
                  ++ + + +l++e+    + +e  +r+ ++lqeql+q k+k+++++r
  EPX70818.1  10 LAFLECMGKLQKELDSSFQRYERLSRTTKDLQEQLNQAKSKSQQSIR 56 
                 56667777888888888888888888888888888888888888776 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0018
      FAM184  46 eeeldlkqkiaeleesleqhekekrqalaefeqykrrveerelkleaehsqkvvelsreveevkrkFeeklrqfaqlq 123
                 +e++ lkq + + e+  ++++k  ++++  +++y ++++ +    + e+ + + +l++e +   +k +  ++++++++
  EPX70818.1  80 AENATLKQDARNFEQISNNYAKGMEEMVGFVSSYTEKMNMKLKTVHDEYLKMYDTLAAERLSFSKKNQRDVQALEKVK 157
                 467789999999999999999999999999999999999999999999999999999999999999999999988765 PP

>> DUF4446  Protein of unknown function (DUF4446)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.5    0.0014         1      40      80 ..      16      56 ..       4      59 .. 0.89
   2 ?    3.2   0.6      0.11        80      35      76 ..      84     125 ..      68     156 .. 0.55

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.0014
     DUF4446 40 gksleellkekleeveelkeeseelekeieeleeklkkslq 80
                  +l++ l + ++++e+l++++++l++++++ ++k ++s++
  EPX70818.1 16 MGKLQKELDSSFQRYERLSRTTKDLQEQLNQAKSKSQQSIR 56
                568999******************************99986 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.11
     DUF4446  35 mkgkdgksleellkekleeveelkeeseelekeieeleeklk 76 
                 + ++d+++ e++ +++ + +ee+   +++ +++++   ++++
  EPX70818.1  84 TLKQDARNFEQISNNYAKGMEEMVGFVSSYTEKMNMKLKTVH 125
                 334455555655555555555554444433333332222222 PP

>> CortBP2  Cortactin-binding protein-2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   2.7     0.039        29     144     180 ..      17      53 ..       4      56 .. 0.89
   2 ?   10.4   2.4   0.00062      0.46      67     151 ..      84     165 ..      72     167 .. 0.83

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.039
     CortBP2 144 erLkqeleqekaqkkklekelkkllekleeerkkqkq 180
                  +L++el+   ++ ++l++  k l+e+l++ ++k +q
  EPX70818.1  17 GKLQKELDSSFQRYERLSRTTKDLQEQLNQAKSKSQQ 53 
                 589***************************9999887 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00062
     CortBP2  67 sketsesevkklyekqlaeLekliekqreaqermleqLaaaekrhrkvleeLeeekrkheedtaqgddvtylLekererLkqele 151
                 + ++++ ++++++++  + +e+++       e+m  +L+++ +++ k+ + L  e+   ++  +++ dv   Lek +  L q le
  EPX70818.1  84 TLKQDARNFEQISNNYAKGMEEMVGFVSSYTEKMNMKLKTVHDEYLKMYDTLAAERLSFSK--KNQRDVQ-ALEKVKGWLLQALE 165
                 55677889999999*****************************************988773..3344555.77887777777776 PP

>> GAS  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   2.4    0.0039       2.9     102     140 ..      17      55 ..       8      60 .. 0.87
   2 ?    5.4   3.5     0.014        10      63     143 ..      75     149 ..      63     167 .. 0.46

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0039
         GAS 102 kdlkwehevleqrfekvekerdelykkfeaaiqevqqkt 140
                  +l+ e ++  qr+e++++  ++l+++ ++a  + qq +
  EPX70818.1  17 GKLQKELDSSFQRYERLSRTTKDLQEQLNQAKSKSQQSI 55 
                 578999999999999999999999999999998888865 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.014
         GAS  63 LkkaeeeveeLrkqlknyekdkqslknlkarlkelekelkdlkwehevleqrfekvekerdelykkfeaaiqevqqktglk 143
                 L ++++e++ L+++++n+e+  + +++       +e+ +  ++   e +++++++v++e+ ++y++  a     ++k +  
  EPX70818.1  75 LIELRAENATLKQDARNFEQISNNYAK------GMEEMVGFVSSYTEKMNMKLKTVHDEYLKMYDTLAAERLSFSKKNQRD 149
                 344444455555555555444333332......234444444444444444444444444444444444333333333322 PP

>> Spc24  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   1.7    0.0016       1.2       9      54 ..      19      69 ..      16      75 .. 0.77
   2 ?    3.1   1.2      0.15   1.1e+02      18      49 ..      73     114 ..      70     155 .. 0.68

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0016
       Spc24  9 iakelsdleselesleselaelkeeleeleeesee....keser..ve.detl 54
                ++kel++  +  e+l+ + ++l+e+l++ +++s++    ++     +  detl
  EPX70818.1 19 LQKELDSSFQRYERLSRTTKDLQEQLNQAKSKSQQsirgSS--SgaSYsDETL 69
                78999999999**********************99665422..1232236655 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.15
       Spc24  18 selesleselaelkeeleeleeesee...keser..........v 49 
                 +el +l++e a lk+  ++ e+ s++       +          +
  EPX70818.1  73 MELIELRAENATLKQDARNFEQISNNyakG---MeemvgfvssyT 114
                 688899999999999999999999995541...222244444331 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.7    0.0023       1.7      20      68 ..      12      60 ..       2      70 .. 0.81
   2 ?    1.9   2.4      0.47   3.5e+02      13      13 ..     103     103 ..      69     167 .. 0.51

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.0023
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHXXXXXXXXXXXXXXXX CS
        YabA 20 lleeleelkeelaelleenaeLeleneklrerleeeekkekekkkelse 68
                +le +++l++el + +++ ++L+   + l+e+l+++++k++++ + +s+
  EPX70818.1 12 FLECMGKLQKELDSSFQRYERLSRTTKDLQEQLNQAKSKSQQSIRGSSS 60
                567899***************************7777766666555444 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.47
                 H CS
        YabA  13 l 13 
                 +
  EPX70818.1 103 M 103
                 1 PP

>> CHD5  CHD5-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.6    0.0024       1.8      64      94 ..      27      57 ..      21      70 .. 0.86
   2 ?    1.5   0.5      0.31   2.3e+02      22      98 ..     116     145 ..      64     164 .. 0.64

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0024
        CHD5 64 fAkWaKlnRkldkleeeleklkkelsaskss 94
                f ++ +l R+ ++l+e+l+++k++ ++s   
  EPX70818.1 27 FQRYERLSRTTKDLQEQLNQAKSKSQQSIRG 57
                889******************9999887655 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.31
        CHD5  22 knllwllylkkvssksakeqrklkkellklkeelnsisaqDefAkWaKlnRkldkleeeleklkkelsaskssfkkk 98 
                 k+ +    lk+v+++ +k + +l +e+l+                                             +kk
  EPX70818.1 116 KMNM---KLKTVHDEYLKMYDTLAAERLSF--------------------------------------------SKK 145
                 3222...22344444444444444444444............................................333 PP

>> Occludin_ELL  Occludin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   2.1    0.0085       6.4      14      54 ..      20      60 ..      14      94 .. 0.80
   2 ?    2.2   2.4      0.41   3.1e+02      35      50 ..     111     126 ..      62     157 .. 0.51

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0085
  Occludin_ELL 14 kaeFnkeYkeYkelhaeleevskkfseLerelkelkegske 54
                  ++e ++ +++Y +l +  +++++++++ +++ +++ +gs+ 
    EPX70818.1 20 QKELDSSFQRYERLSRTTKDLQEQLNQAKSKSQQSIRGSSS 60
                  56778899999999999999999999999999988887773 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.41
  Occludin_ELL  35 skkfseLerelkelke 50 
                   s+  ++++ +lk+ ++
    EPX70818.1 111 SSYTEKMNMKLKTVHD 126
                   2222222222222222 PP

>> Fib_alpha  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   1.3     0.011       8.5      35      74 ..      14      53 ..       1      68 [. 0.79
   2 ?    4.1   0.9     0.065        48      39     109 ..      87     158 ..      74     166 .. 0.59

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.011
                HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Fib_alpha 35 kdlekleneleeisnstkeaeelvkeikdslrekqkskkd 74
                + + kl++el++  ++++  ++++k+++++l+++++++++
  EPX70818.1 14 ECMGKLQKELDSSFQRYERLSRTTKDLQEQLNQAKSKSQQ 53
                5667899999999999999999999999999998888875 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.065
                 CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHH CS
   Fib_alpha  39 kleneleeisnstkeaeelvkeikdslrekqkskkdn.dnvikksskeleeeilrlketidaqesnirvLqn 109
                 +  +++e+isn++ +  e ++   +s++ek + k ++    + k+ ++l  e l + ++ ++ ++ +++ ++
  EPX70818.1  87 QDARNFEQISNNYAKGMEEMVGFVSSYTEKMNMKLKTvHDEYLKMYDTLAAERLSFSKKNQRDVQALEKVKG 158
                 445567777777655444444444444444444433334555555566666788888777777777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2307  (0.128674); expected 358.6 (0.02)
Passed bias filter:                      926  (0.0516482); expected 358.6 (0.02)
Passed Vit filter:                        94  (0.0052429); expected 17.9 (0.001)
Passed Fwd filter:                        27  (0.00150594); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              24  [number of targets reported over threshold]
# CPU time: 0.60u 0.32s 00:00:00.92 Elapsed: 00:00:00.46
# Mc/sec: 1108.35
//
Query:       EPX70819.1  [L=223]
Description: DUF1640 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.5e-40  137.5   4.5    5.2e-40  137.4   4.5    1.0  1  DUF1640       Protein of unknown function (DUF1640)
     0.0012   19.0   0.3     0.0016   18.6   0.3    1.1  1  Nucleoporin2  Nucleoporin autopeptidase
  ------ inclusion threshold ------
       0.11   12.9   0.2         20    5.7   0.0    2.8  3  FlaC_arch     Flagella accessory protein C (FlaC)
       0.19   11.9   2.9       0.38   11.0   0.2    2.3  2  Pepsin-I3     Pepsin inhibitor-3-like repeated domain
       0.27   11.7   1.3       0.88   10.0   1.1    1.9  2  DUF2939       Protein of unknown function (DUF2939)


Domain annotation for each model (and alignments):
>> DUF1640  Protein of unknown function (DUF1640)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.4   4.5   1.4e-43   5.2e-40       1     174 [.      46     221 ..      46     222 .. 0.98

  Alignments for each domain:
  == domain 1  score: 137.4 bits;  conditional E-value: 1.4e-43
     DUF1640   1 fDThalvrrLeekG..ftkeqAeaimsaltevlneslekvakslvskselekseylqkaalselrkevqisersefaalrseteklqreleklkqkLre 97 
                 f+T+ ++r L+e G   +k++Ae+ +++++++ ++s +k++  lv+k+++++ +y+qk+++++lr+e+q+ er+e+a+l+++  +l +++e+l++++r+
  EPX70819.1  46 FNTLGFIRGLQEVGigTQKRNAEIFTNTISKIYADSHKKMSGYLVTKEQQDRVMYQQKVDFAHLRSELQSIERQEMASLHAQAGQLYSDIERLRTSFRD 144
                 89**********873367889****************************************************************************** PP

     DUF1640  98 eidklkadirldlnleKgrireelakleakiqelnnkidrevsalrteiEsvKldvikyliglvvgilavglavvRl 174
                 ++++ +a+ rl+l+ e+ +  +e + +e k++el++ id+e+s+ rt++   K++++++l+g+v+g  a++la++Rl
  EPX70819.1 145 QLNNSTAEARLQLSIERLNHYDEASLQELKLRELSAEIDTEMSNFRTQLATYKTQTLQWLLGIVTGSGALLLAYARL 221
                 ****************************************************************************9 PP

>> Nucleoporin2  Nucleoporin autopeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.3   4.4e-07    0.0016      12     138 ..      73     204 ..      68     208 .. 0.80

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 4.4e-07
                   HHHTS-HHHHTSBSS-EEEETTTEEEEESS-B--GGG..-HHHHB.TTTEEEETTEEEESSSCCC.---TTSTT-S.-EEEEESS---B-TT.T--B CS
  Nucleoporin2  12 eLkkmseeelsavkdFtvgrkgvGsveFlepvdlssl..dldeia.gkivklekkevtVYpdeekekppvGegLNk.paeitLenvwpkdka.tkee 103
                   +++k+  ++ ++++++ v++++  +v+++++vd  +l  +l++i  +++  l+ ++ ++Y+d e+ + +   +LN+ +ae  L+ ++++ ++ ++++
    EPX70819.1  73 TISKIYADSHKKMSGYLVTKEQQDRVMYQQKVDFAHLrsELQSIErQEMASLHAQAGQLYSDIERLRTSFRDQLNNsTAEARLQLSIERLNHyDEAS 169
                   6788889999***************************7779999634599*************8989999999975279999999888844314445 PP

                   ---TT-HHHHHHHHHHHH-SSSEEEEEETTTTEEE CS
  Nucleoporin2 104 ikdkskarvkkhieklkkvegteFvsydpetgtwt 138
                    ++ + ++++  i+   +   t+  +y+++t +w 
    EPX70819.1 170 LQELKLRELSAEIDTEMSNFRTQLATYKTQTLQWL 204
                   55555556666666666668899999999999996 PP

>> FlaC_arch  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       1.9     7e+03      14      33 ..      58      77 ..      56      80 .. 0.76
   2 ?    5.7   0.0    0.0055        20       5      39 ..     109     144 ..     106     147 .. 0.89
   3 ?    4.1   0.0     0.017        61       4      22 ..     181     199 ..     179     202 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1.9
   FlaC_arch 14 teletvkkeneelsksveel 33
                + ++t k++ e   +++ ++
  EPX70819.1 58 VGIGTQKRNAEIFTNTISKI 77
                67888888888888888776 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0055
   FlaC_arch   5 lEnklsklst.eletvkkeneelsksveelkenVkd 39 
                 l ++l++++  e++++ ++  +l +++e+l  +++d
  EPX70819.1 109 LRSELQSIERqEMASLHAQAGQLYSDIERLRTSFRD 144
                 66899999998*******************999877 PP

  == domain 3  score: 4.1 bits;  conditional E-value: 0.017
   FlaC_arch   4 elEnklsklsteletvkke 22 
                 e+++++s++ t+l+t k++
  EPX70819.1 181 EIDTEMSNFRTQLATYKTQ 199
                 8999***********9987 PP

>> Pepsin-I3  Pepsin inhibitor-3-like repeated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.2      0.16   5.8e+02      35      56 ..     108     130 ..      82     150 .. 0.66
   2 ?   11.0   0.2   0.00011      0.38      35      60 ..     174     199 ..     170     206 .. 0.90

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.16
   Pepsin-I3  35 ylR.dLtseEqsELktydaevtk 56 
                 +lR +L s E +E++  +a+  +
  EPX70819.1 108 HLRsELQSIERQEMASLHAQAGQ 130
                 55546888888888887777654 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00011
   Pepsin-I3  35 ylRdLtseEqsELktydaevtkYkee 60 
                  lR+L++e   E+  + ++   Yk++
  EPX70819.1 174 KLRELSAEIDTEMSNFRTQLATYKTQ 199
                 69**********************97 PP

>> DUF2939  Protein of unknown function (DUF2939)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   1.1   0.00025      0.88      24      85 ..      93     155 ..      90     159 .. 0.85
   2 ?    4.2   0.2     0.016        57      35      55 ..     133     153 ..     117     195 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00025
     DUF2939  24 rarDaaalselVdfpalraslkaqlnaellraaapdke.ddplgalgaalaaalvdaavdalv 85 
                 +++D+   ++ Vdf +lr  l++   +e+++  a++ +  +++++l +++ ++l +++ +a +
  EPX70819.1  93 EQQDRVMYQQKVDFAHLRSELQSIERQEMASLHAQAGQlYSDIERLRTSFRDQLNNSTAEARL 155
                 578999999*********999999989987776777778899999999999999999888766 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.016
     DUF2939  35 Vdfpalraslkaqlnaellra 55 
                  d ++lr+s ++qln+  ++a
  EPX70819.1 133 SDIERLRTSFRDQLNNSTAEA 153
                 58999*********9987543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (223 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1048  (0.0584528); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.47u 0.28s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 1470.33
//
Query:       EPX70820.1  [L=225]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       422  (0.0235373); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.45
# Mc/sec: 1493.46
//
Query:       EPX70821.1  [L=974]
Description: ribonuclease II family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   4.3e-102  341.8   1.3   9.8e-102  340.6   0.0    2.3  3  RNB            RNB domain
    2.7e-20   72.2   0.4    2.7e-19   69.0   0.0    2.6  2  OB_Dis3        Dis3-like cold-shock domain 2 (CSD2)
  ------ inclusion threshold ------
      0.015   15.6   0.1      0.015   15.6   0.1    2.6  2  Dis3l2_C_term  DIS3-like exonuclease 2 C terminal
      0.064   12.9   0.1       0.18   11.5   0.1    1.7  1  OB_RNB         Ribonuclease B OB domain


Domain annotation for each model (and alignments):
>> RNB  RNB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.8         1   4.6e+03     228     271 ..     176     220 ..     154     230 .. 0.61
   2 !  340.6   0.0  2.2e-105  9.8e-102       1     325 [.     488     833 ..     488     834 .. 0.95
   3 ?   -1.9   0.0      0.36   1.6e+03     251     295 ..     848     892 ..     840     897 .. 0.82

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 1
                 xxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxx RF
         RNB 228 epsnekledliklakklglk.lednsskknlqeslekleeeeaeq 271
                 +p+++k +++ k+  + ++  +++++++++++  ++k  +++ ++
  EPX70821.1 176 KPKKSKKKSFKKSKDDKKIVpEKQEDKEHQVSAPINKSSKNMRRK 220
                 566677777777777666664333334444555555555555333 PP

  == domain 2  score: 340.6 bits;  conditional E-value: 2.2e-105
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RNB   1 RkdlrdllvitIdpedakdlDdAisieklpngnyelgVhIADvshyvkegspldkearkratsvyLpekvvpMLPqelsedlcSLnpgedrlalsvlid 99 
                 R+d+r+ +v+tIdp++akdlDdA+s++ l ng ye+gVhIADvsh++k+++pldkea+ rat+vyL +k +pMLP+ l+e+lcSLnp+ +rla+sv+++
  EPX70821.1 488 RRDFRNDIVLTIDPDTAKDLDDAVSCKYLGNGTYEVGVHIADVSHFMKPDTPLDKEAASRATTVYLVQKAIPMLPSLLCERLCSLNPQVERLAFSVTWK 586
                 9************************************************************************************************** PP

                 xxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxx..........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RNB 100 vdek.gevlsveiylsvIkskarltydevqdlleqkdeke.ekk..........taedLellyelakalrkkRlkkgalefdspeikllldedkgnrie 186
                 ++++  ev + ++++svIk   rl y e+q+++e+k  +e  +k          ++e +  l+e++++lr++R +kga+e++s e k++l+e  g + +
  EPX70821.1 587 MNKDgKEVGKRWFGKSVIKTCSRLAYGEAQNIIEGKSWAEgVGKpiggnhsakdVEETIMVLFEISRKLRARRFAKGAVEINSTELKFQLNE-YGLPDM 684
                 ****6669**************************9999988877******9999999999********************************.999999 PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxx RF
         RNB 187 lkveeetkahslveelmllANelvArfl.seleipailriheepsnekledliklakklglklednsskknlqeslekleeee...aeqllselllrll 281
                  +v+e+++a++l+ee+mllAN+ vA+++ + ++ +a+lr+h  p++ +++++ k+ + l++ ++ +ss  ++++s+++l+++      +l++ + +r+l
  EPX70821.1 685 CEVYEQKEANHLIEEFMLLANRSVAEKIsNSFPANALLRRHASPKERQINEFCKFMEGLKFHFDASSSF-SFNDSMNRLRSSFnpdLVELFENMAVRSL 782
                 ****************************999**************************777776666666.7777777766655555999********** PP

                 xxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RNB 282 keakyssep.......vgHfgLaleeYthfTSPirRYpDlvvhrllkalla 325
                 ++a+y+++        ++H++L+++ YthfTSPirRYpD++vhrll+ +l+
  EPX70821.1 783 NRAEYFCTGdfpersdWHHYALSFDYYTHFTSPIRRYPDVIVHRLLENALK 833
                 ******999999999********************************9997 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 0.36
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RNB 251 nsskknlqeslekleeeeaeqllselllrllkeakyssepvgHfg 295
                 +++ ++++e  ++++e+ ++ +ls ++ ++ k+  +ss pv+ f+
  EPX70821.1 848 AEHSNEQREKANTIQEDSQQLFLSVFISEYCKKRGVSSMPVTAFA 892
                 455567889999999999999***********9999999987776 PP

>> OB_Dis3  Dis3-like cold-shock domain 2 (CSD2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.2      0.21   9.4e+02       9      37 ..     157     185 ..     155     188 .. 0.89
   2 !   69.0   0.0   5.9e-23   2.7e-19       1      77 []     379     459 ..     379     459 .. 0.98

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.21
                 TTS--EEEETTSSTTTHHHHTTTTTT--E CS
     OB_Dis3   9 krlPriliptkelpeeflenpeelegklf 37 
                 ++ P+  +p++ + e+ l++p++ ++k f
  EPX70821.1 157 EKTPKAQVPSTVMDEKALTKPKKSKKKSF 185
                 689*******************9998865 PP

  == domain 2  score: 69.0 bits;  conditional E-value: 5.9e-23
                 EEEE--SSTTS--EEEETTSST....TTHHHHTTTTTT--EEEEE----TT-SS-EEEEEEE-HHHHHHHHHHHHHHHHTT CS
     OB_Dis3   1 yvlfkPldkrlPriliptkelp....eeflenpeelegklfvvkidsWsetsryPlGeivksLGeagdieaeteaiLleng 77 
                 y++f+P+dkr+P+i+i++++l     ++++en+ ++ +klf+++i +Ws++sryP+G + ++LG + ++e  t+a++leng
  EPX70821.1 379 YAIFIPKDKRMPFITIHKNDLGilkvHDWIENILNHHSKLFAAEISKWSTYSRYPMGVLKEELGSVTNVEDYTNALILENG 459
                 799*****************999999*****************************************************96 PP

>> Dis3l2_C_term  DIS3-like exonuclease 2 C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.7       1.4   6.4e+03      53      73 ..     186     206 ..     161     218 .. 0.60
   2 ?   15.6   0.1   3.3e-06     0.015       6      39 ..     889     923 ..     885     953 .. 0.76

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 1.4
  Dis3l2_C_term  53 kkdvpeaevvqeeekfssvvk 73 
                    kk ++ +++v+e+++++++++
     EPX70821.1 186 KKSKDDKKIVPEKQEDKEHQV 206
                    333334455555555555544 PP

  == domain 2  score: 15.6 bits;  conditional E-value: 3.3e-06
  Dis3l2_C_term   6 kavVvnVldssfDVlileyGlekRVyldklp.lke 39 
                    +a  + + d+s+DV++ +yG+  RV l + + +k+
     EPX70821.1 889 TAFATRIQDRSIDVYVSQYGISSRVELLNDDnVKT 923
                    56778899*****************8755443555 PP

>> OB_RNB  Ribonuclease B OB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   4.1e-05      0.18      11      49 ..     255     294 ..     252     300 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 4.1e-05
                 EEEEECT.TEEEEE-.HHHHTTS-TT-EEEEEEEE.SSSEE CS
      OB_RNB  11 GFlipdegkeDifip.peqmkkamhGDrVlvritk.gdrrg 49 
                 +F+  ++  +D++i  p   ++a+h D+V+v++ + + + g
  EPX70821.1 255 AFVCMED-RPDFYIDgPIARNRALHNDIVVVKPIEdKNDNG 294
                 7999997.9*****6378999************99644444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (974 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1449  (0.0808188); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.80u 0.33s 00:00:01.13 Elapsed: 00:00:00.47
# Mc/sec: 6174.78
//
Query:       EPX70822.1  [L=475]
Description: rRNA methyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-28   99.7   0.9    2.6e-28   99.0   0.0    1.8  2  Methyltr_RsmB-F  16S rRNA methyltransferase RsmB/F
    0.00061   19.3   0.4     0.0013   18.2   0.0    1.7  2  Methyltransf_4   Putative methyltransferase
     0.0036   16.9   0.4        0.2   11.2   0.0    2.5  2  Methyltransf_15  RNA cap guanine-N2 methyltransferase
     0.0069   16.2   0.0      0.015   15.1   0.0    1.7  1  Methyltransf_31  Methyltransferase domain
  ------ inclusion threshold ------
      0.013   15.6   0.5      0.031   14.4   0.1    2.0  2  FtsJ             FtsJ-like methyltransferase
      0.027   15.1   0.0        0.1   13.3   0.0    2.0  2  Methyltransf_25  Methyltransferase domain


Domain annotation for each model (and alignments):
>> Methyltr_RsmB-F  16S rRNA methyltransferase RsmB/F
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.0   0.0   8.8e-32   2.6e-28      11     199 ..     219     421 ..     207     422 .. 0.88
   2 ?   -2.8   0.4       1.3     4e+03     100     124 ..     442     466 ..     438     471 .. 0.75

  Alignments for each domain:
  == domain 1  score: 99.0 bits;  conditional E-value: 8.8e-32
                      EEEESS-TTSHHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CTCCHHHHCC...EEEEEEEE--CCGGGTTT-TCHHH CS
  Methyltr_RsmB-F  11 tilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.elfDriLlDaPCsgtgvirrdpdvkl 103
                       i+D caaPG KTth+a+l  + ++++A +++++R+k +++ +   g +n+ ++++D ++ d +  + + + +iLlD  Csg g+++r+  + l
       EPX70822.1 219 NIIDGCAAPGNKTTHLAAL-FPDSKIFAFERDSQRVKTLQKMVDISGAQNVEIIHGDFTHSDPMDPKfANVTHILLDPSCSGSGIVSRQDFL-L 310
                      59*****************.67789***********************************99887777899****************97666.9 PP

                      H--HHHHHHHHHHHHHHHHHHCCCE......EEEEEEEEEES--STTTTHHHHHHHHHH-TTEEEESSBSTTSTTSSECEEC.........TSE CS
  Methyltr_RsmB-F 104 rrkekdiaqlaklqkellsaaidll......kkgGvlvYsTCsvlveEneevieeaLkkredvelvetelsepkglklgeea.........gtl 182
                      + +e+d+ + +++ ++l s   + l       +  ++ YsTCsv+  Ene+v+ ++L++  +++  ++e + p+  + g  +         +++
       EPX70822.1 311 EDSEQDVVEDVNRLENLCSFQSTILkhalqfPESRYVTYSTCSVHRLENEQVVCDVLSQDSQWKCNSLENTLPQWEDRGIPEyctdptmakSMI 404
                      999999998888877777777776622333345679*******************************9999988888887778899999999** PP

                      EE-TTTTSS-SEEEEEE CS
  Methyltr_RsmB-F 183 rllPhtenkdgffiakl 199
                      r +P++  + gff+ +l
       EPX70822.1 405 RCVPGKFGTIGFFVCNL 421
                      **************987 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.3
                      CHHHH--HHHHHHHHHHHHHHHHHH CS
  Methyltr_RsmB-F 100 dvklrrkekdiaqlaklqkellsaa 124
                      ++k +rk+k ++++++++++ l+aa
       EPX70822.1 442 NAKRKRKNKKMKSIKRKKEKKLEAA 466
                      6778888888888888888877776 PP

>> Methyltransf_4  Putative methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   4.4e-07    0.0013       6      60 ..     221     275 ..     218     289 .. 0.91
   2 ?   -4.0   0.4         3   8.9e+03     147     162 ..     447     462 ..     431     470 .. 0.45

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 4.4e-07
                     EEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHHHHHCTTSSEEEEES-C CS
  Methyltransf_4   6 leiGcGkGeflvalAkknPdknflGiEirvkvvakvlkkiealelkNlrilrgda 60 
                     ++ + + G+ + +lA  +Pd ++++ E  +++v+++ k ++ ++++N++i++gd 
      EPX70822.1 221 IDGCAAPGNKTTHLAALFPDSKIFAFERDSQRVKTLQKMVDISGAQNVEIIHGDF 275
                     56677889********************************************995 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 3
                     TCHCHHCCCSSTTCCC CS
  Methyltransf_4 147 eeplsvlriatkyeqk 162
                      + ++++ i  k e+k
      EPX70822.1 447 RKNKKMKSIKRKKEKK 462
                     2222333444444444 PP

>> Methyltransf_15  RNA cap guanine-N2 methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.1     0.018        53      99     157 ..     108     166 ..      92     169 .. 0.80
   2 !   11.2   0.0   6.6e-05       0.2       4     101 ..     220     317 ..     217     382 .. 0.75

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.018
  Methyltransf_15  99 kplkleqllkeslklskniilfLPrnsdlnqlaaltaevlekaakvkvveikenglvka 157
                       +lk+ + +k+  +l  +  + LPr + +n ++a+ +ev+++ a  +v ++ke g   +
       EPX70822.1 108 VKLKIRKRVKSHEELALKNPVTLPRWVRINTVKATQEEVIKQLALTRVFSLKEVGPKTY 166
                      5666667777766666666788********************99999999998876655 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 6.6e-05
  Methyltransf_15   4 ilDlfsGaGGnviqfalvfe..kviaieinleklacaqhNaevYgvsdkitlvlgdvfellaklklekikvdlvflSpPwGGpsYkkqekfdlk 95 
                      i+D ++  G ++ ++a  f+  k++a e + ++++  q+   + g ++++ +++gd+++    +  + ++v  ++l p + G +   +++f l+
       EPX70822.1 220 IIDGCAAPGNKTTHLAALFPdsKIFAFERDSQRVKTLQKMVDISG-AQNVEIIHGDFTHS-DPMDPKFANVTHILLDPSCSGSGIVSRQDFLLE 311
                      89999999999*******95338*******************996.678*******9763.333333334467777777777777777777776 PP

  Methyltransf_15  96 kklkpl 101
                      ++++++
       EPX70822.1 312 DSEQDV 317
                      665554 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   4.9e-06     0.015       6      66 ..     219     279 ..     214     370 .. 0.91

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 4.9e-06
  Methyltransf_31   6 rvlDlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaqklgldnveFeqgdiee.l 66 
                      +++D  ++ G++t  la  l+p+++++ ++++ + ++  +++ +  g +nve  +gd+++  
       EPX70822.1 219 NIIDGCAAPGNKTTHLA-ALFPDSKIFAFERDSQRVKTLQKMVDISGAQNVEIIHGDFTHsD 279
                      788988899********.99**************************************9844 PP

>> FtsJ  FtsJ-like methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       1.7     5e+03      83      97 ..      66      80 ..      40     120 .. 0.52
   2 ?   14.4   0.1     1e-05     0.031      21      97 ..     216     315 ..     175     454 .. 0.70

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 1.7
                HHHSSEEEEEE--S- CS
        FtsJ 83 lserkvdlvvsDgap 97
                ++++ + + v+D+ +
  EPX70822.1 66 IKKNLARVLVHDLLM 80
                222334444444433 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 1e-05
                 TT-EEEECT-TTSHHHHHHCCT.T.-SEEEEEESSSS........HHH...TTEEEECS-CCCSSHHH....HHCHCHHH.............SSEEEE CS
        FtsJ  21 pgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm........apl...pgvttiqgditdpetie....kikealse.............rkvdlv 91 
                 ++++++D +aaPG+ +  l+  +   +k++a+   +           +   ++v++i+gd+t+ + ++    +    + +             ++ d+ 
  EPX70822.1 216 KVGNIIDGCAAPGNKTTHLAALFPD-SKIFAFERDSQrvktlqkmVDIsgaQNVEIIHGDFTHSDPMDpkfaN----VTHilldpscsgsgivSRQDFL 309
                 5578*****************9975.99999865444446664332225668***********9999932221....2223444555556666444555 PP

                 EE--S- CS
        FtsJ  92 vsDgap 97 
                 + D   
  EPX70822.1 310 LEDSEQ 315
                 544443 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0         6   1.8e+04      30      55 ..      88     112 ..      84     119 .. 0.63
   2 ?   13.3   0.0   3.4e-05       0.1       1      68 [.     220     288 ..     220     295 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 6
                      SHHHHHHHHHHHHHTTTTEEEEESBC CS
  Methyltransf_25  30 seemleaareraeeeglnvefvqgda 55 
                      s +++++a  r++  +ln+efv+ ++
       EPX70822.1  88 STGLIKEAILRHK-TRLNAEFVKLKI 112
                      5666666666663.446888877666 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 3.4e-05
                      EEEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTT.TEEEEESBCCGBSSSTTTEEEE CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeegl.nvefvqgdaedlpfedgsfDlv 68 
                      ++d ++ +G+ t +la+ ++++k+ +++ +++ +++ ++ ++ +g+ nve+++gd+++ +  d +f  v
       EPX70822.1 220 IIDGCAAPGNKTTHLAALFPDSKIFAFERDSQRVKTLQKMVDISGAqNVEIIHGDFTHSDPMDPKFANV 288
                      67888999***********99********************99999**********9988777777555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (475 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1361  (0.0759105); expected 358.6 (0.02)
Passed bias filter:                      547  (0.0305092); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.60u 0.28s 00:00:00.88 Elapsed: 00:00:00.45
# Mc/sec: 3193.62
//
Query:       EPX70823.1  [L=133]
Description: cornichon family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-39  135.3  12.5    1.5e-39  135.1  12.5    1.0  1  Cornichon  Cornichon protein


Domain annotation for each model (and alignments):
>> Cornichon  Cornichon protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.1  12.5   8.4e-44   1.5e-39       2     122 .]       5     125 ..       4     125 .. 0.99

  Alignments for each domain:
  == domain 1  score: 135.1 bits;  conditional E-value: 8.4e-44
   Cornichon   2 llfilaliltaallflsvyfiialsDleadyinpidlcsklNplvlpelilhafltllfllsgewilfllnlpllayniyrvmskqglydpteifnqlk 100
                 ++++++l++t+a ++l +yf++++sDl++d+inpidl++klN++v+pe++lha+ ++l+l+sg w++f++nlp++++n++ ++++++l d t+if+ ++
  EPX70823.1   5 WIYFTSLMMTCASIMLHMYFTVMYSDLKDDFINPIDLSRKLNYYVIPEMMLHAISSVLLLFSGAWVCFIFNLPMMLWNVQLYLTHNHLHDSTTIFKDVS 103
                 799************************************************************************************************ PP

   Cornichon 101 khkkesmiklafylllffiyLY 122
                 + +k+s+ikla+  +lff+yL+
  EPX70823.1 104 NRQKRSFIKLAWFSILFFTYLF 125
                 *********************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       660  (0.0368119); expected 358.6 (0.02)
Passed bias filter:                      215  (0.0119917); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 923.89
//
Query:       EPX70824.1  [L=123]
Description: eukaryotic protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.8e-48  164.0   3.7      2e-48  163.8   3.7    1.0  1  DUF2340      Uncharacterized conserved protein (DUF2340)
     0.0075   16.2   0.2      0.012   15.6   0.2    1.3  1  DUF1247      Protein of unknown function (DUF1247)
  ------ inclusion threshold ------
      0.013   15.5   0.9        1.3    9.1   0.9    2.7  1  Ubiquitin_4  Ubiquitin-like domain
      0.021   15.2   0.2      0.025   14.9   0.2    1.2  1  Blt1         Blt1 N-terminal domain
      0.021   14.5   2.3        3.2    7.6   0.3    2.4  2  ubiquitin    Ubiquitin family
       0.11   12.3   1.7       0.26   11.1   0.8    1.9  2  Rad60-SLD    Ubiquitin-2 like Rad60 SUMO-like


Domain annotation for each model (and alignments):
>> DUF2340  Uncharacterized conserved protein (DUF2340)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.8   3.7   6.6e-52     2e-48       1     120 []       4     122 ..       4     122 .. 1.00

  Alignments for each domain:
  == domain 1  score: 163.8 bits;  conditional E-value: 6.6e-52
     DUF2340   1 ltvRviksfeyRnvknlvlknvdlktttvkdllelvkeeiktesglkpfrnvkydtlKiytkahgsKttnlvinlddddelilkdeektLaelgvenEt 99 
                 ltvRvi++feyR++kn+v++++dl+tttv +l++ ++++i+t+s+lk +r++++dtlKiy ka+++Kt+nl inld+dd +il+d+++tLa  g+enEt
  EPX70824.1   4 LTVRVIRNFEYRTLKNVVFHDIDLSTTTVGQLKKIIQDRIQTDSALKIYRTTQFDTLKIYVKAQQHKTQNLAINLDHDD-WILTDDHQTLAFSGIENET 101
                 7******************************************************************************.******************* PP

     DUF2340 100 elslfnredYeefkanpeekW 120
                 els+fn ++Y++++anp +kW
  EPX70824.1 102 ELSYFNLQAYRAYQANPVQKW 122
                 ********************* PP

>> DUF1247  Protein of unknown function (DUF1247)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.2     4e-06     0.012       6      83 ..      30     105 ..      25     111 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 4e-06
     DUF1247   6 dtmgqqgkllpeiieadddfkvnqtrnlscktveylnflendklfrcrlcythadwlwcdfhrnhayrgtrditcnny 83 
                  t+gq  k++ + i++d  +k+ +t ++   t++     ++ k     +   h dw+  d h+  a+ g  + t   y
  EPX70824.1  30 TTVGQLKKIIQDRIQTDSALKIYRTTQFD--TLKIYVKAQQHKTQNLAINLDHDDWILTDDHQTLAFSGIENETELSY 105
                 589*******************9998875..55555567788999999999*****************9988776555 PP

>> Ubiquitin_4  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.9   0.00045       1.3      19      85 ..      28     105 ..       4     108 .. 0.56

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00045
  Ubiquitin_4  19 qnatvkdLkkaierkvel......klkrekekkkisWk.yvWktycLsf....egekLkddkaklkeygirnkselsF 85 
                  +++tv +Lkk i+  ++       ++ ++  + ki  k    kt  L++    ++  L+dd+++l+  gi+n+ els+
   EPX70824.1  28 STTTVGQLKKIIQDRIQTdsalkiYRTTQFDTLKIYVKaQQHKTQNLAInldhDDWILTDDHQTLAFSGIENETELSY 105
                  467888888888887755221111111122222222211123333333311114556888888888888888888887 PP

>> Blt1  Blt1 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.2   8.3e-06     0.025      71     118 ..      16      68 ..       2      95 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 8.3e-06
        Blt1  71 palelsldnvalattsvkdlkeavqervkeae.....tkvpldkikiLykkkP 118
                 +  ++++++++l+tt+v +lk+ +q+r+++ +      +   d +ki  k + 
  EPX70824.1  16 TLKNVVFHDIDLSTTTVGQLKKIIQDRIQTDSalkiyRTTQFDTLKIYVKAQQ 68 
                 33468999*******************99877777876778888998877655 PP

>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.1    0.0011       3.4      17      33 ..      28      44 ..       4      49 .. 0.82
   2 ?    7.6   0.3    0.0011       3.2      11      65 ..      47     103 ..      43     106 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0011
                TTSBHHHHHHHHHHHHT CS
   ubiquitin 17 esdtveelKekiaekeg 33
                +++tv +lK+ i+++ +
  EPX70824.1 28 STTTVGQLKKIIQDRIQ 44
                5799*********9875 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0011
                 EEEEEETTSBHHHHHHHHHHHHTSSGGGE.EEEETTEEE.-TTSBHGGHTTSTTEEE CS
   ubiquitin  11 itleveesdtveelKekiaekegipaeqq.rLiysGkvL.edertleeygiqdgstl 65 
                   l++ ++++ ++lK  + ++++   +    L ++  +L +d++tl+  gi++++ l
  EPX70824.1  47 SALKIYRTTQFDTLKIYVKAQQHKTQNLAiNLDHDDWILtDDHQTLAFSGIENETEL 103
                 568999999******9999999655555449********9*******9999998765 PP

>> Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.21   6.2e+02      19      37 ..      28      46 ..      15      49 .. 0.79
   2 ?   11.1   0.8   8.9e-05      0.26      14      68 ..      48     103 ..      38     105 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.21
                TTSBHHHHHHHHHHHHT-- CS
   Rad60-SLD 19 ptttvskLieayrkkkgip 37
                +tttv +L++  +++ +++
  EPX70824.1 28 STTTVGQLKKIIQDRIQTD 46
                5899999999988887765 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 8.9e-05
                 EEEEETTSBHHHHHHHHHHHHT----TT-EEEETTEE-.-TTSBGGGSS--TTEEE CS
   Rad60-SLD  14 kikVkptttvskLieayrkkkgipeeqkvrLiFDGeeL.dpnstvedldiedgdti 68 
                  +k+++tt++ +L+ + + +++  ++  ++L  D+  L d+++t++  +ie++ ++
  EPX70824.1  48 ALKIYRTTQFDTLKIYVKAQQHKTQNLAINLDHDDWILtDDHQTLAFSGIENETEL 103
                 689**********9999999999999999999999999556789999999988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       868  (0.0484132); expected 358.6 (0.02)
Passed bias filter:                      366  (0.0204139); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 984.07
//
Query:       EPX70825.1  [L=1045]
Description: translation elongation factor eEF3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.9e-45  152.7   0.0    1.9e-22   80.3   0.0    4.1  2  ABC_tran        ABC transporter
      1e-17   63.9   0.1    3.7e-17   62.1   0.1    2.0  1  4HB             Four helical bundle domain
      2e-15   57.4   0.1     0.0022   17.9   0.0    4.4  4  AAA_21          AAA domain, putative AbiEii toxin, Type IV TA
    6.7e-13   48.6   0.3       0.01   15.3   0.0    4.3  4  SMC_N           RecF/RecN/SMC N terminal domain
    1.2e-08   34.5   0.1     0.0066   16.2   0.0    2.4  2  AAA_29          P-loop containing region of AAA domain
    1.4e-08   35.5   0.7     0.0035   17.9   0.0    3.1  2  AAA_23          AAA domain
    8.8e-08   32.5   0.0      0.084   13.1   0.0    4.6  4  AAA_22          AAA domain
    1.2e-06   28.5   0.0     0.0037   17.2   0.0    2.5  2  RsgA_GTPase     RsgA GTPase
    1.3e-06   28.5   0.0      0.018   15.1   0.0    2.9  2  MMR_HSR1        50S ribosome-binding GTPase
    7.3e-06   25.9   0.0       0.22   11.2   0.0    3.0  2  AAA_15          AAA ATPase domain
    9.3e-06   26.2   0.0       0.11   13.0   0.0    3.0  2  AAA_18          AAA domain
    3.6e-05   23.9   0.0       0.33   11.1   0.0    2.9  2  AAA_33          AAA domain
    3.9e-05   23.8   0.6      0.043   13.9   0.0    3.2  2  DUF87           Helicase HerA, central domain
    5.9e-05   23.5   0.0       0.31   11.4   0.0    3.3  2  AAA_16          AAA ATPase domain
    0.00014   22.3   0.1       0.93    9.9   0.0    3.9  2  AAA             ATPase family associated with various cellula
    0.00014   22.2   0.0       0.57   10.6   0.0    2.6  2  RNA_helicase    RNA helicase
    0.00014   20.9   0.1       0.45    9.5   0.0    2.5  2  MeaB            Methylmalonyl Co-A mutase-associated GTPase M
    0.00016   21.6   0.0      0.029   14.2   0.0    2.9  2  CLP1_P          mRNA cleavage and polyadenylation factor CLP1
    0.00016   22.0   0.0       0.32   11.2   0.0    2.5  2  AAA_28          AAA domain
     0.0002   21.4   0.0      0.019   15.0   0.0    2.6  2  Dynamin_N       Dynamin family
    0.00026   20.6   0.0      0.087   12.4   0.1    3.5  4  MMS19_N         Dos2-interacting transcription regulator of R
     0.0009   19.0   0.1       0.99    9.1   0.1    3.1  3  AAA_24          AAA domain
    0.00099   19.1   0.1       0.34   10.8   0.0    3.1  2  ATPase_2        ATPase domain predominantly from Archaea
      0.001   19.0   0.0       0.98    9.3   0.0    2.8  2  NACHT           NACHT domain
     0.0013   18.5   0.0        2.6    7.7   0.0    3.0  2  AAA_30          AAA domain
      0.003   17.2   0.0        2.9    7.4   0.0    2.5  2  AAA_27          AAA domain
     0.0043   17.3   0.2        6.7    7.0   0.0    3.6  2  Roc             Ras of Complex, Roc, domain of DAPkinase
     0.0046   16.6   0.2        1.3    8.6   0.0    3.1  2  cobW            CobW/HypB/UreG, nucleotide-binding domain
     0.0052   16.8   0.0          6    6.9   0.0    3.0  2  AAA_14          AAA domain
     0.0058   16.6   0.0       0.82    9.6   0.0    2.4  2  Rad17           Rad17 P-loop domain
  ------ inclusion threshold ------
      0.016   15.0   0.0          2    8.1   0.0    2.6  2  Cytidylate_kin  Cytidylate kinase
      0.021   14.6   0.3        8.7    6.0   0.0    2.7  2  ATP_bind_1      Conserved hypothetical ATP binding protein
      0.024   13.8   4.2        1.3    8.0   0.2    3.1  4  MMS19_C         RNAPII transcription regulator C-terminal
      0.026   13.7   0.1       0.91    8.6   0.0    2.4  2  NB-ARC          NB-ARC domain
      0.031   13.8   0.0        7.4    6.0   0.0    2.4  2  AAA_7           P-loop containing dynein motor region
      0.035   13.3   0.0        7.1    5.7   0.0    2.5  2  DUF815          Protein of unknown function (DUF815)
      0.036   13.4   0.4        1.1    8.6   0.0    2.6  2  Mg_chelatase    Magnesium chelatase, subunit ChlI
       0.04   13.2   0.1         32    3.7   0.0    3.4  3  Zeta_toxin      Zeta toxin
      0.049   13.4   0.0          3    7.6   0.0    2.7  2  PduV-EutP       Ethanolamine utilisation - propanediol utilis
      0.053   13.4   0.3         15    5.5   0.1    2.8  2  NTPase_1        NTPase
      0.057   13.2   0.4        1.7    8.5   0.1    2.7  2  HTH_ParB        HTH domain found in ParB protein
      0.064   13.9   0.0       0.66   10.6   0.0    2.3  2  PIN7            PIN domain
       0.09   12.8   0.1         19    5.2   0.1    2.4  2  MutS_V          MutS domain V
      0.097   13.2   1.2        7.3    7.2   0.1    3.9  3  HEAT_EZ         HEAT-like repeat
       0.11   12.5   0.1         25    4.9   0.0    2.5  2  TsaE            Threonylcarbamoyl adenosine biosynthesis prot
       0.11   11.2   0.1        7.4    5.3   0.0    2.2  2  Adeno_IVa2      Adenovirus IVa2 protein
       0.12   11.4   0.0         16    4.4   0.0    2.4  2  T2SSE           Type II/IV secretion system protein
       0.15   10.7   0.0         10    4.6   0.0    2.3  2  AAA_13          AAA domain
       0.17   11.6   0.0         28    4.4   0.0    2.7  2  IstB_IS21       IstB-like ATP binding protein


Domain annotation for each model (and alignments):
>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.1   0.0   1.2e-20   4.5e-18       1     137 []     448     575 ..     448     575 .. 0.77
   2 !   80.3   0.0   5.2e-25   1.9e-22       3     137 .]     690     930 ..     688     930 .. 0.78

  Alignments for each domain:
  == domain 1  score: 66.1 bits;  conditional E-value: 1.2e-20
                 EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--...SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHHHHHTCHHHHHHHSTTGG CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   1 lknvslklkegekvaivGenGaGKStLlkllagllkp...teGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvrenesdeeiekalsklglke 96 
                 l++  l lk+g+++++ G+nG+GKStL++++ +       t  +  + ++d++e   e    ++ ++  +    p++t+      ++ e++++ l+ + 
  EPX70825.1 448 LNRTRLRLKRGRRYGLCGPNGSGKSTLMRAIVNGQVEgfpTHLRTVYVEHDIDE--SEADTPSVDFIMSD----PNVTI------KNSEDVVKALKENS 534
                 5778899***********************986544322222222233444444..77777788888888....55554......33577888888888 PP

                 TTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  97 lkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137
                 ++d+ + +    LSgG+k ++al ra++k+p++lllDEpt+
  EPX70825.1 535 FTDELIAKPIGALSGGWKMKLALTRAMFKNPDILLLDEPTN 575
                 8889998888******************************8 PP

  == domain 2  score: 80.3 bits;  conditional E-value: 5.2e-25
                 EEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEE.....................EETTCEGGG........B-HHHCCHCEEEE-SS--S-T CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....................xxxxxxxxx........xxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   3 nvslklkegekvaivGenGaGKStLlkllagllkpteGei.....................lldgkdlke........qeleslrkeigvlpqepqlfp 72 
                 ++s++++ ++++a++G+nGaGKStL+k+l+g+l pt G+i                     + d+ ++++        ++le ++k ++v+ + ++   
  EPX70825.1 690 DISFQVSLSSRIAVIGPNGAGKSTLIKVLTGELLPTTGDIyqhencriayvaqaafahlglHPDKSPSEYiqwrfqsgEDLEAMDKASRVINEADEE-- 786
                 89**************************************888888888777777777777444444444544444455555555555555555332.. PP

                 TSBHHHH...........................................................................HHHTC............ CS
                 xxxxxxx...........................................................................xxxxx............ RF
    ABC_tran  73 eltvren...........................................................................esdee............ 84 
                                                                                                                    
  EPX70825.1 787 ------AmknkifkiegtprkilgihsrrklknsyeyecsftvgenigmkserwvpmmssdnawlprgelmeshakmvaevdR---Aealksgqfrplv 876
                 ......0233333336778888888888889999999999999999***9999999999999999999998777776665440...1455666678888 PP

                 HHHHHHHSTTGGTTCBGESTTS.GGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  85 iekalsklglkelkdtvvkssp.ssLSgGqkqrvalarallkkpkllllDEpta 137
                  +++ ++ gl +l+ + v++s  + LSgGqk++++la++ + +p +++lDEpt+
  EPX70825.1 877 RKEIEEHCGLLGLEPELVSHSRiKGLSGGQKVKLVLAACTWLRPHVIVLDEPTN 930
                 88899999999999999987778******************************8 PP

>> 4HB  Four helical bundle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.1   0.1     1e-19   3.7e-17       4      77 ..     341     412 ..     339     413 .. 0.95

  Alignments for each domain:
  == domain 1  score: 62.1 bits;  conditional E-value: 1e-19
         4HB   4 etvlailkeilkskkkkvaekfepvleYiaAiAgqLiDekeidsaaWvenlkpyvtvivgekeakeivdelRkr 77 
                 e++ ++lk++l +  kkv ++ e++++Y aA+A+qL++ek++ds++W++n+ p+v+++v e++   +v++lR r
  EPX70825.1 341 EVCGETLKAVLGD--KKVPHHEEVIAKYAAAVAAQLVEEKDSDSESWMQNVAPFVAAFVPEANVAVVVEDLRAR 412
                 678899*******..8999999**************************************************88 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   5.9e-06    0.0022       3      20 ..     462     479 ..     461     517 .. 0.86
   2 !   12.5   0.0   0.00025     0.093     243     303 .]     553     608 ..     528     608 .. 0.72
   3 !   16.3   0.0   1.8e-05    0.0067       3      19 ..     702     718 ..     701     733 .. 0.88
   4 ?    5.0   0.0     0.049        18     237     299 ..     902     958 ..     875     962 .. 0.80

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 5.9e-06
      AAA_21   3 vliGpNgsGKSnLLdald 20 
                 +l GpNgsGKS+L++a+ 
  EPX70825.1 462 GLCGPNGSGKSTLMRAIV 479
                 699*************95 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 0.00025
      AAA_21 243 rllalltallralkkgsllliDEpEngLHP...kllrrllellkelsrngaQviltTHSpllld 303
                   lal  a++  +   ++ll+DEp n+L+    ++l+ +l+  k+ s+     i+++H+  +ld
  EPX70825.1 553 MKLALTRAMFKNP---DILLLDEPTNHLDVvnvAWLENFLTSQKNVSS-----IIVSHDSGFLD 608
                 5555555555555...9*************555666665544455555.....99999987775 PP

  == domain 3  score: 16.3 bits;  conditional E-value: 1.8e-05
      AAA_21   3 vliGpNgsGKSnLLdal 19 
                 ++iGpNg+GKS+L++ l
  EPX70825.1 702 AVIGPNGAGKSTLIKVL 718
                 79*************99 PP

  == domain 4  score: 5.0 bits;  conditional E-value: 0.049
      AAA_21 237 lSdGtkrllalltallralkkgsllliDEpEngLHPkllrrllellkelsrngaQviltTHSp 299
                 lS G+k  l l++  + ++    ++++DEp n L+   l  l + lk+    g+ v+l+THS 
  EPX70825.1 902 LSGGQKVKLVLAACTWLRP---HVIVLDEPTNYLDRDSLGALSKGLKSF---GGGVVLVTHSR 958
                 6777777754444444444...89***********99999999888777...66999999995 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.1   0.00011      0.04      29      49 ..     463     481 ..     448     534 .. 0.65
   2 !   15.3   0.0   2.7e-05      0.01     120     205 ..     523     610 ..     497     620 .. 0.78
   3 !    9.2   0.1    0.0021      0.76      27      42 ..     701     716 ..     689     722 .. 0.83
   4 ?    5.8   0.0     0.022       8.2     136     205 ..     901     964 ..     742     977 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 0.00011
                 EEESTTSSHHHHHHHHHHHCT CS
                 xxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  29 ivGpNGSGKsnlldAilFvLG 49 
                 + GpNGSGKs l+ Ai  v G
  EPX70825.1 463 LCGPNGSGKSTLMRAI--VNG 481
                 78**************..555 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 2.7e-05
                 HHHHHHHHHCTT-STT.......CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC- CS
                 xxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 120 kkevsellesagiske.......lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemleka 205
                 +++v + l++  ++ e       +LSgG k    laL     ++k   + llDe   +LD  nv+ + ++l +++ n+  i++s+++++l ++
  EPX70825.1 523 SEDVVKALKENSFTDEliakpigALSGGWKM--KLAL--TRAMFKNPDILLLDEPTNHLDVVNVAWLENFLTSQK-NVSSIIVSHDSGFLDHV 610
                 4566666666666666777777789999883..4444..4667888889**********************9988.88899999*99988766 PP

  == domain 3  score: 9.2 bits;  conditional E-value: 0.0021
                 EEEEESTTSSHHHHHH CS
                 xxxxxxxxxxxxxxxx RF
       SMC_N  27 taivGpNGSGKsnlld 42 
                  a++GpNG+GKs l+ 
  EPX70825.1 701 IAVIGPNGAGKSTLIK 716
                 689*********9986 PP

  == domain 4  score: 5.8 bits;  conditional E-value: 0.022
                 CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 136 lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemleka 205
                  LSgG+k    + L++A     +  + +lDe    LD     ++++ lk+      ++ +++++e++e  
  EPX70825.1 901 GLSGGQK----VKLVLAACTWLRPHVIVLDEPTNYLDRDSLGALSKGLKSFG--GGVVLVTHSREFTEGL 964
                 79****9....56666655555555779********************9998..7788888888887765 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   1.8e-05    0.0066      17      42 ..     453     478 ..     447     480 .. 0.77
   2 !   15.7   0.1   2.6e-05    0.0095      18      44 ..     694     720 ..     688     730 .. 0.76

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.8e-05
      AAA_29  17 ieidlkgatlltGpsGsGKSTllDAi 42 
                 +++++   + l Gp+GsGKSTl+ Ai
  EPX70825.1 453 LRLKRGRRYGLCGPNGSGKSTLMRAI 478
                 56664447889************887 PP

  == domain 2  score: 15.7 bits;  conditional E-value: 2.6e-05
      AAA_29  18 eidlkgatlltGpsGsGKSTllDAiqa 44 
                 +++l++ + ++Gp+G+GKSTl+  ++ 
  EPX70825.1 694 QVSLSSRIAVIGPNGAGKSTLIKVLTG 720
                 555566789************965555 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   9.7e-06    0.0035      24      39 ..     463     478 ..     459     543 .. 0.80
   2 !   14.5   0.0   0.00011     0.039      23      41 ..     702     720 ..     677     820 .. 0.67

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 9.7e-06
      AAA_23  24 ItGpNGaGKTTildAi 39 
                 ++GpNG+GK+T+++Ai
  EPX70825.1 463 LCGPNGSGKSTLMRAI 478
                 79*************9 PP

  == domain 2  score: 14.5 bits;  conditional E-value: 0.00011
      AAA_23  23 lItGpNGaGKTTildAikl 41 
                 +++GpNGaGK+T++  ++ 
  EPX70825.1 702 AVIGPNGAGKSTLIKVLTG 720
                 567***********98774 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0      0.67   2.4e+02      72     104 ..     244     280 ..     195     302 .. 0.82
   2 !   13.1   0.0   0.00023     0.084      10      38 ..     463     497 ..     456     603 .. 0.66
   3 !   10.5   0.0    0.0015      0.55       8      29 ..     701     722 ..     698     769 .. 0.83
   4 ?   -0.8   0.0       4.7   1.7e+03      87     128 ..     916     954 ..     847     962 .. 0.70

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.67
      AAA_22  72 rlsseellealeqalrarav....ielliiDEaqhlr 104
                   +++ ++ +l++ l++ra+    ++++iiD++ +l 
  EPX70825.1 244 APTLSIMVPLLARGLNERATpikrKAAVIIDNMSKLV 280
                 467889999999*******9**999********9874 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 0.00023
      AAA_22  10 vtGesGtGKTtllrrlleqldeeakaee.......e 38 
                 ++G+ G+GK+tl+r +++  +e  ++++       +
  EPX70825.1 463 LCGPNGSGKSTLMRAIVNGQVEG-FPTHlrtvyveH 497
                 8****************998643.333234444440 PP

  == domain 3  score: 10.5 bits;  conditional E-value: 0.0015
      AAA_22   8 lvvtGesGtGKTtllrrlleql 29 
                 ++v+G+ G+GK+tl++ l+ +l
  EPX70825.1 701 IAVIGPNGAGKSTLIKVLTGEL 722
                 79**************988776 PP

  == domain 4  score: -0.8 bits;  conditional E-value: 4.7
      AAA_22  87 raravielliiDEaqh.lrseealeeLrsllnlsrkgvqliLv 128
                    + ++++++DE  + l   + l  L++ l+  ++g  ++Lv
  EPX70825.1 916 TWLR-PHVIVLDEPTNyL-DRDSLGALSKGLK--SFGGGVVLV 954
                 3333.4788888887777.6777777777777..777777776 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0    0.0045       1.6     100     122 ..     459     481 ..     437     518 .. 0.81
   2 !   17.2   0.0     1e-05    0.0037      92     133 ..     690     732 ..     661     735 .. 0.75

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0045
                  SEEEEECSTTSSHHHHHHHHCTT CS
  RsgA_GTPase 100 ktsvlvGqSGvGKStLinallpe 122
                  +   l+G+ G GKStL+ a+++ 
   EPX70825.1 459 RRYGLCGPNGSGKSTLMRAIVNG 481
                  66779*************99886 PP

  == domain 2  score: 17.2 bits;  conditional E-value: 1e-05
                  HHHHHCTT.SEEEEECSTTSSHHHHHHHHCTT-----S----- CS
  RsgA_GTPase  92 elkellkd.ktsvlvGqSGvGKStLinallpelelktgevsek 133
                  +++ +++  + ++++G+ G+GKStLi++l++el   tg++ ++
   EPX70825.1 690 DISFQVSLsSRIAVIGPNGAGKSTLIKVLTGELLPTTGDIYQH 732
                  555554443567789******************9999999876 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.0    0.0016       0.6       3      26 ..     462     485 ..     460     541 .. 0.74
   2 !   15.1   0.0   4.9e-05     0.018       1      23 [.     700     723 ..     700     744 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.0016
                 EEEESTTSSHHHHHHHHHTSTEEE CS
    MMR_HSR1   3 aivGrpNvGKStLinaltgekaiv 26 
                 ++ G   +GKStL++a+++ +++ 
  EPX70825.1 462 GLCGPNGSGKSTLMRAIVNGQVEG 485
                 789999************976544 PP

  == domain 2  score: 15.1 bits;  conditional E-value: 4.9e-05
                 EEEEEESTTSSHHHHHHHHHTS.T CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltge.k 23 
                 ++a++G   +GKStLi+ ltge  
  EPX70825.1 700 RIAVIGPNGAGKSTLIKVLTGElL 723
                 69******************9843 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0    0.0006      0.22      28      48 ..     463     480 ..     461     544 .. 0.73
   2 !   11.2   0.0   0.00061      0.22      17      43 ..     693     718 ..     690     819 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.0006
      AAA_15  28 liGkNnsGKSsilealdlFln 48 
                 l+G+N+sGKS++++a+    n
  EPX70825.1 463 LCGPNGSGKSTLMRAI---VN 480
                 8**************9...44 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00061
      AAA_15  17 veidlseeltvliGkNnsGKSsileal 43 
                 ++++ls+    +iG+N++GKS+++++l
  EPX70825.1 693 FQVSLSS-RIAVIGPNGAGKSTLIKVL 718
                 6788888.899**************98 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0    0.0031       1.1       3      21 ..     463     481 ..     462     542 .. 0.71
   2 !   13.0   0.0   0.00031      0.11       1      75 [.     701     791 ..     701     812 .. 0.65

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.0031
      AAA_18   3 ltGtpGvGKttlakeLskr 21 
                 l+G+ G+GK+tl +++ + 
  EPX70825.1 463 LCGPNGSGKSTLMRAIVNG 481
                 8*************99654 PP

  == domain 2  score: 13.0 bits;  conditional E-value: 0.00031
      AAA_18   1 IlltGtpGvGKttlakeLskrl.gf............gvnlrdvakenglllevdpe...aldeskrldedkldklldaleenssaleegk 75 
                 I++ G+ G+GK+tl k L  +l                ++ +  +++ gl  +  p    +++ +  +d + +dk+++ ++e+++  +++k
  EPX70825.1 701 IAVIGPNGAGKSTLIKVLTGELlPTtgdiyqhencriAYVAQAAFAHLGLHPDKSPSeyiQWRFQSGEDLEAMDKASRVINEADEEAMKNK 791
                 89****************5444111333333333355555555555555555555557788888888888888888888888776444444 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   0.0   0.00089      0.33       4      20 ..     463     479 ..     462     544 .. 0.83
   2 !    9.5   0.0    0.0029         1       3      23 ..     702     722 ..     701     778 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00089
      AAA_33   4 lvGlpGsGKstlaerll 20 
                 l+G++GsGKstl + ++
  EPX70825.1 463 LCGPNGSGKSTLMRAIV 479
                 7************9987 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.0029
      AAA_33   3 llvGlpGsGKstlaerllkkl 23 
                  ++G++G+GKstl++ l  +l
  EPX70825.1 702 AVIGPNGAGKSTLIKVLTGEL 722
                 589***********9987665 PP

>> DUF87  Helicase HerA, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0     0.025       9.3      24      48 ..     459     483 ..     451     493 .. 0.83
   2 !   13.9   0.0   0.00012     0.043      13      48 ..     690     723 ..     680     729 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.025
       DUF87  24 rHlAilgsTGsGKSntvavLleell 48 
                 r+ +  g  GsGKS++++ +++  +
  EPX70825.1 459 RRYGLCGPNGSGKSTLMRAIVNGQV 483
                 666777888***********99876 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 0.00012
       DUF87  13 pvyldlnklvtrHlAilgsTGsGKSntvavLleell 48 
                 ++++ +   ++ ++A++g  G+GKS++++vL  ell
  EPX70825.1 690 DISFQV--SLSSRIAVIGPNGAGKSTLIKVLTGELL 723
                 444444..5699*******************99997 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.0    0.0091       3.3      28      69 ..     462     508 ..     446     594 .. 0.72
   2 !   11.4   0.0   0.00086      0.31      26     106 ..     700     771 ..     691     803 .. 0.64

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0091
      AAA_16  28 llsGesGvGKsslvrellralekd.....ggiflrgkcdqlesaipy 69 
                  l G+ G+GKs+l+r++ +   +      + ++++ + d++e+++p 
  EPX70825.1 462 GLCGPNGSGKSTLMRAIVNGQVEGfpthlRTVYVEHDIDESEADTPS 508
                 478************99862222245544444556666665555554 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00086
      AAA_16  26 lvllsGesGvGKsslvrellralekdggiflrgkcdqlesa..ipysalaqalareellrqlldeaesaeleawrekleeala 106
                  + ++G+ G GKs+l++ l  +l  +     +g+  q+ ++  i+y  +aqa+ +   l    d+ + +e  +wr +  e l+
  EPX70825.1 700 RIAVIGPNGAGKSTLIKVLTGELLPT-----TGDIYQH-ENcrIAY--VAQAA-F-AHLGLHPDK-SPSEYIQWRFQSGEDLE 771
                 578*************9999888777.....3333333.2211333..55555.3.333444444.33366666666666666 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.0    0.0025      0.93       3      22 ..     463     482 ..     461     576 .. 0.62
   2 ?    7.5   0.0     0.014       5.3       3      22 ..     703     722 ..     701     764 .. 0.84

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.0025
                 EESSTTSSHHHHHHHHHHHH CS
         AAA   3 lyGppGtGKTllakavakel 22 
                 l+Gp G GK++l++a+++  
  EPX70825.1 463 LCGPNGSGKSTLMRAIVNGQ 482
                 89**************9973 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.014
                 EESSTTSSHHHHHHHHHHHH CS
         AAA   3 lyGppGtGKTllakavakel 22 
                 ++Gp G GK++l+k +  el
  EPX70825.1 703 VIGPNGAGKSTLIKVLTGEL 722
                 89*************99986 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.0    0.0059       2.2       3      21 ..     463     481 ..     462     502 .. 0.80
   2 !   10.6   0.0    0.0016      0.57       2      36 ..     702     731 ..     701     743 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0059
  RNA_helicase   3 lyGpsgeGKStlakeLaka 21 
                   l+Gp+g GKStl++ +++ 
    EPX70825.1 463 LCGPNGSGKSTLMRAIVNG 481
                   79************98765 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.0016
  RNA_helicase   2 wlyGpsgeGKStlakeLakallkklklkkkdsvys 36 
                    + Gp+g GKStl+k L+ +ll     ++++++y 
    EPX70825.1 702 AVIGPNGAGKSTLIKVLTGELL-----PTTGDIYQ 731
                   689*************999999.....44455554 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.0    0.0021      0.77      15      50 ..     444     479 ..     433     485 .. 0.87
   2 !    9.5   0.0    0.0012      0.45       5      53 ..     670     722 ..     667     728 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0021
                 HHHHHHHHGGG-S-SEEEEEEE-TTSSHHHHHHHHH CS
        MeaB  15 akellerllakaGraqvvGltGvPGaGkstlvealg 50 
                 ak ll+r + +  r ++ Gl G  G+Gkstl+ a++
  EPX70825.1 444 AKILLNRTRLRLKRGRRYGLCGPNGSGKSTLMRAIV 479
                 7889999999999******************99876 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.0012
                 HHHHH--SH....HHHHHHHHHGGG-S-SEEEEEEE-TTSSHHHHHHHHHHHH CS
        MeaB   5 itlveserp....eakellerllakaGraqvvGltGvPGaGkstlvealglel 53 
                 i  v++       +++  l  ++ +   + ++ + G  GaGkstl++ l+ el
  EPX70825.1 670 IVKVNNMSFqypgTSQPQLVDISFQVSLSSRIAVIGPNGAGKSTLIKVLTGEL 722
                 55555543333367888888999999999******************999887 PP

>> CLP1_P  mRNA cleavage and polyadenylation factor CLP1 P-loop
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.0     8e-05     0.029       1      40 [.     465     507 ..     465     509 .. 0.86
   2 ?    4.1   0.0     0.095        35       1      19 [.     705     723 ..     705     729 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 8e-05
      CLP1_P   1 GpkdsGKSTlarlLlNyal...rkgrkpvyvDlDvGqseispP 40 
                 Gp+ sGKSTl+r ++N  +     + ++vyv+ D+  se  +P
  EPX70825.1 465 GPNGSGKSTLMRAIVNGQVegfPTHLRTVYVEHDIDESEADTP 507
                 899**************9944347789********99997766 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.095
      CLP1_P   1 GpkdsGKSTlarlLlNyal 19 
                 Gp+ +GKSTl+++L  ++l
  EPX70825.1 705 GPNGAGKSTLIKVLTGELL 723
                 899***********99987 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0    0.0076       2.8       4      40 ..     463     500 ..     460     524 .. 0.78
   2 !   11.2   0.0   0.00087      0.32       1      39 [.     700     743 ..     700     788 .. 0.70

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0076
      AAA_28   4 itGgestGKTtlleaLaargypvvpEaareileekl.a 40 
                 + G+ ++GK+tl++a+ + +++ +p   r+++ e+  +
  EPX70825.1 463 LCGPNGSGKSTLMRAIVNGQVEGFPTHLRTVYVEHDiD 500
                 78***************998888888888877777643 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00087
      AAA_28   1 kivitGgestGKTtlleaLaar.....gypvvpEaareileekl 39 
                 +i+++G+ ++GK+tl++ L+ +     g  + +E  r  +  ++
  EPX70825.1 700 RIAVIGPNGAGKSTLIKVLTGEllpttGDIYQHENCRIAYVAQA 743
                 79***************998443332233333666655555555 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0      0.15        54       3      23 ..     463     483 ..     462     542 .. 0.82
   2 !   15.0   0.0   5.2e-05     0.019       1      80 [.     701     788 ..     701     928 .. 0.69

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.15
                 EEEBTTTTHHHHHHHHHTS-- CS
   Dynamin_N   3 vvGsqSsGKSSvlnaLlgedi 23 
                 ++G   sGKS+++ a++  ++
  EPX70825.1 463 LCGPNGSGKSTLMRAIVNGQV 483
                 68999***********98775 PP

  == domain 2  score: 15.0 bits;  conditional E-value: 5.2e-05
                 EEEEEBTTTTHHHHHHHHHTS--S---SSS---S-EEEEE.............CCT---CCS...SSEEEE.T-EB--CHHHHHHHHHHHHHHH CS
   Dynamin_N   1 iavvGsqSsGKSSvlnaLlgedilprgpnptTrrplelql.............geeeeaseravkeelkek.ekkledfsevreeieketekia 80 
                 iav+G   +GKS+++  L+ge  lp+   +     + + +             +++++     + ++++ +  ++le +++  + i+++ e++ 
  EPX70825.1 701 IAVIGPNGAGKSTLIKVLTGEL-LPTTGDIYQHENCRIAYvaqaafahlglhpDKSPS-----EYIQWRFQsGEDLEAMDKASRVINEADEEAM 788
                 89******************98.99999999999999999555555555444422222.....2222222244444444444444443333333 PP

>> MMS19_N  Dos2-interacting transcription regulator of RNA-Pol-II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.1   0.00024     0.087       6     101 ..      19     112 ..      11     132 .. 0.71
   2 ?    1.9   0.0      0.37   1.3e+02     199     237 ..     121     161 ..     110     169 .. 0.79
   3 ?    1.8   0.0      0.41   1.5e+02     207     254 ..     172     219 ..     165     222 .. 0.89
   4 ?   -2.3   0.0       7.1   2.6e+03     224     260 ..     932     969 ..     925     970 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00024
     MMS19_N   6 eyLtseddkvRakavslLaevlsrlpkkklseeev.evLvqFflsrledfavlkealkgllaLlrlkkfsaee...avevlralfeevhvqslaqadRk 100
                 + Lt  d ++ a a s La++++     +++e+++ +++++ + ++l+d+++++ +lkg++a++++ +++a+     ve+l a++e+v    ++ ++R+
  EPX70825.1  19 NNLTVCDAAQEADAASALASFVNG----PIEEQDApSLVFKHIQKQLKDKKIVERVLKGIEAVANFPNIAADVepyLVELLPAVVEKVA--DKQLNVRE 111
                 456667888999999999999773....4555555166789**************************9988875666666666666554..44444454 PP

     MMS19_N 101 l 101
                 +
  EPX70825.1 112 A 112
                 4 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.37
     MMS19_N 199 laasplfa.plalplllekLds.tsvsakldaLqtlaacve 237
                   +++++a + ++p++le++ s  + + k  +Lq+l   ve
  EPX70825.1 121 VRSTSAYAvKATVPIVLESIHStGKWTEKMNSLQLLDLLVE 161
                 4577777735689*********667789*******998877 PP

  == domain 3  score: 1.8 bits;  conditional E-value: 0.41
     MMS19_N 207 plalplllekLdstsvsakldaLqtlaacveaygaeavaehlralwsa 254
                 p ++p++ e++  t+ ++k+++ +t++++++   ++++ +++ +l++ 
  EPX70825.1 172 PSIIPVVSESMWDTKGEIKKQSRETMTKVCTLIANADIDRFIPELINC 219
                 6789**************************999999999998888775 PP

  == domain 4  score: -2.3 bits;  conditional E-value: 7.1
     MMS19_N 224 akldaLqtlaacveay.gaeavaehlralwsalkkeil 260
                   +d+L +l + ++++ g   +  h+r++ + l +e++
  EPX70825.1 932 LDRDSLGALSKGLKSFgGGVVLVTHSREFTEGLTEEVW 969
                 568*************4455667999999999999986 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0     0.021       7.6       2      22 ..     458     478 ..     457     540 .. 0.83
   2 !    9.1   0.1    0.0027      0.99       3      22 ..     699     718 ..     697     726 .. 0.86
   3 ?   -2.4   0.0       8.8   3.2e+03     113     141 ..     939     967 ..     934     979 .. 0.76

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.021
      AAA_24   2 klkiliyGpsgiGKTtlakel 22 
                 ++++ + Gp+g+GK+tl++ +
  EPX70825.1 458 GRRYGLCGPNGSGKSTLMRAI 478
                 578899***********9977 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0027
      AAA_24   3 lkiliyGpsgiGKTtlakel 22 
                  +i+++Gp+g+GK+tl+k l
  EPX70825.1 699 SRIAVIGPNGAGKSTLIKVL 718
                 589*************9976 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 8.8
      AAA_24 113 rllkklqelrknvifiahektrkdedpeg 141
                  l k l+++++ v+++ h+++ + + +e+
  EPX70825.1 939 ALSKGLKSFGGGVVLVTHSREFTEGLTEE 967
                 56677999999********9988887755 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.0   0.00092      0.34      26      55 ..     464     496 ..     452     637 .. 0.62
   2 ?    4.4   0.0     0.081        30      24      43 ..     702     721 ..     695     741 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00092
    ATPase_2  26 YGpegsGKtaLlkeiienl.edkdk..yviyyi 55 
                  Gp gsGK++L++ i++ + e      + +y+ 
  EPX70825.1 464 CGPNGSGKSTLMRAIVNGQvEGFPThlRTVYVE 496
                 6***************98833322233444443 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.081
    ATPase_2  24 fiYGpegsGKtaLlkeiien 43 
                  + Gp g GK++L+k +  +
  EPX70825.1 702 AVIGPNGAGKSTLIKVLTGE 721
                 577***********987655 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   0.0    0.0027      0.98       5      26 ..     463     484 ..     459     524 .. 0.86
   2 ?    6.5   0.0      0.02       7.3       2      22 ..     700     720 ..     699     760 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.0027
                 EEC-TTTCHHHHHHHHHHHHCT CS
       NACHT   5 lqGeaGsGKTtLlqklalawae 26 
                 l G++GsGK+tL++ ++    e
  EPX70825.1 463 LCGPNGSGKSTLMRAIVNGQVE 484
                 679*************986555 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.02
                 CEEEEC-TTTCHHHHHHHHHH CS
       NACHT   2 lvilqGeaGsGKTtLlqklal 22 
                  +++ G++G GK+tL++ l  
  EPX70825.1 700 RIAVIGPNGAGKSTLIKVLTG 720
                 5899***********998765 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.0     0.011         4      22      40 ..     462     480 ..     452     488 .. 0.85
   2 !    7.7   0.0    0.0072       2.6      21      44 ..     701     725 ..     689     783 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.011
      AAA_30  22 vltGpAGtGKttalkalre 40 
                  l Gp G+GK+t+++a+++
  EPX70825.1 462 GLCGPNGSGKSTLMRAIVN 480
                 578*************975 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.0072
      AAA_30  21 avltGpAGtGKttalkal.reawea 44 
                  ++ Gp G+GK+t++k+l  e++ +
  EPX70825.1 701 IAVIGPNGAGKSTLIKVLtGELLPT 725
                 5689************994455544 PP

>> AAA_27  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0    0.0081       2.9      32      47 ..     464     479 ..     450     497 .. 0.88
   2 ?    6.9   0.0     0.011       4.1      30      46 ..     702     718 ..     687     724 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0081
      AAA_27  32 yGpNEAGKstalrAis 47 
                  GpN +GKst++rAi 
  EPX70825.1 464 CGPNGSGKSTLMRAIV 479
                 7*************96 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.011
      AAA_27  30 liyGpNEAGKstalrAi 46 
                  ++GpN AGKst+++ +
  EPX70825.1 702 AVIGPNGAGKSTLIKVL 718
                 589*********98765 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.0     0.018       6.7       4      26 ..     463     485 ..     460     529 .. 0.82
   2 ?    6.0   0.0     0.036        13       1      20 [.     700     719 ..     700     742 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.018
                 EESSTTSSHHHHHHCHCT-CCC- CS
         Roc   4 lvGdsgvGKtsllkrfvedkfse 26 
                 l+G +g+GK++l++ +v+++++ 
  EPX70825.1 463 LCGPNGSGKSTLMRAIVNGQVEG 485
                 79****************99874 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.036
                 EEEEESSTTSSHHHHHHCHC CS
         Roc   1 KvvlvGdsgvGKtsllkrfv 20 
                 ++ ++G +g+GK++l+k ++
  EPX70825.1 700 RIAVIGPNGAGKSTLIKVLT 719
                 5899************9886 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0    0.0035       1.3       4      38 ..     462     501 ..     460     522 .. 0.71
   2 ?    4.3   0.0     0.073        27       4      21 ..     702     719 ..     699     736 .. 0.87

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0035
                 EEEESTTCCHHHHHHHHH.....CT--SS-EEEEESS-SS CS
        cobW   4 vltGflGsGKTtLlnhll.....enraglklavivNefge 38 
                 +l+G+ GsGK+tL+++++         +l++  ++ ++ e
  EPX70825.1 462 GLCGPNGSGKSTLMRAIVngqveGFPTHLRTVYVEHDIDE 501
                 689**************95443333345555555555555 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.073
                 EEEESTTCCHHHHHHHHH CS
        cobW   4 vltGflGsGKTtLlnhll 21 
                  + G+ G+GK+tL++ l+
  EPX70825.1 702 AVIGPNGAGKSTLIKVLT 719
                 6889**********9775 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.0     0.016         6       6      43 ..     462     502 ..     458     622 .. 0.79
   2 ?    6.4   0.0     0.023       8.5       5      28 ..     701     732 ..     698     785 .. 0.75

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.016
      AAA_14   6 vitGaRrvGKTtllkqlikell...vkkesilyinldderd 43 
                  + G+  +GK+tl++ +++ +     ++ +++y++ d ++ 
  EPX70825.1 462 GLCGPNGSGKSTLMRAIVNGQVegfPTHLRTVYVEHDIDES 502
                 5789**************99988765555666666554443 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.023
      AAA_14   5 lvitGaRrvGKTtllkqlikell........v 28 
                 +++ G+  +GK+tl+k l  ell         
  EPX70825.1 701 IAVIGPNGAGKSTLIKVLTGELLpttgdiyqH 732
                 6799**************99999766665333 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0     0.089        33      49      66 ..     462     479 ..     445     514 .. 0.80
   2 !    9.6   0.0    0.0022      0.82      50      73 ..     703     726 ..     690     812 .. 0.78

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.089
       Rad17  49 LisGPsGCgkstvvkvLs 66 
                  ++GP G gkst ++ + 
  EPX70825.1 462 GLCGPNGSGKSTLMRAIV 479
                 58**********998765 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.0022
       Rad17  50 isGPsGCgkstvvkvLskelgikl 73 
                 + GP G gkst +kvL+ el +  
  EPX70825.1 703 VIGPNGAGKSTLIKVLTGELLPTT 726
                 67***************9987765 PP

>> Cytidylate_kin  Cytidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0     0.093        34       4      18 ..     464     478 ..     462     484 .. 0.87
   2 ?    8.1   0.0    0.0054         2       1      33 [.     701     730 ..     701     795 .. 0.80

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.093
                     E-STTSSHHHHHHHH CS
  Cytidylate_kin   4 DGPagsGKssvaral 18 
                      GP gsGKs++ ra+
      EPX70825.1 464 CGPNGSGKSTLMRAI 478
                     59*********9987 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.0054
                     EEEE-STTSSHHHHHHHHHHHHT-EEEEHHHHH CS
  Cytidylate_kin   1 iaiDGPagsGKssvaralaeklglkyldtgalY 33 
                     ia+ GP g+GKs++ + l+ +l      tg +Y
      EPX70825.1 701 IAVIGPNGAGKSTLIKVLTGELL---PTTGDIY 730
                     8999*************998873...3456666 PP

>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.0     0.027       9.9       2      17 ..     464     479 ..     463     489 .. 0.90
   2 ?    6.0   0.0     0.024       8.7       1      17 [.     703     719 ..     703     731 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.027
  ATP_bind_1   2 vGpaGsGKttfvgals 17 
                 +Gp GsGK+t+++a++
  EPX70825.1 464 CGPNGSGKSTLMRAIV 479
                 7***********9986 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.024
  ATP_bind_1   1 vvGpaGsGKttfvgals 17 
                 v+Gp G+GK+t+++ l+
  EPX70825.1 703 VIGPNGAGKSTLIKVLT 719
                 89**********99875 PP

>> MMS19_C  RNAPII transcription regulator C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       3.4   1.2e+03     189     247 ..      13      62 ..       6      78 .. 0.60
   2 ?   -1.9   0.0       3.7   1.4e+03      18      57 ..      65     113 ..      53     132 .. 0.63
   3 ?    8.0   0.2    0.0037       1.3     333     420 ..     132     216 ..     128     219 .. 0.80
   4 ?    5.6   0.1      0.02       7.3     366     420 ..     241     297 ..     237     300 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 3.4
     MMS19_C 189 dlsellnellellaseaespflrlaylrllallvNKflkdedlselldellesieesli 247
                 +l+elln+l+       ++  +   +  +la++vN  ++++d ++l   + + i+++l+
  EPX70825.1  13 TLDELLNNLTV------CDAAQEADAASALASFVNGPIEEQDAPSL---VFKHIQKQLK 62 
                 33444444444......66666666677777777777766666665...5555555444 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 3.7
     MMS19_C  18 a.yervLeaLaelssekqlfetlvirllnkldlvlksnes........s 57 
                 + +ervL+ ++++++ +++   + + l++ l +v+++ ++        +
  EPX70825.1  65 KiVERVLKGIEAVANFPNIAADVEPYLVELLPAVVEKVADkqlnvreaA 113
                 2478888888888888888888888888888887777777555555552 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.0037
     MMS19_C 333 vlpklvegfks.sdsetkenyLvALshllkhvPkslllpeLptLlPlLlqaLdlpdaevkastLetlksile.espslvsehlssLvprL 420
                  +p ++e+++s  + ++k n L  L +l+++ P++l    Lp+++P++ +++  ++ e+k+ + et + +++       +  ++  +p L
  EPX70825.1 132 TVPIVLESIHStGKWTEKMNSLQLLDLLVETSPSQLSY-SLPSIIPVVSESMWDTKGEIKKQSRETMTKVCTlI----ANADIDRFIPEL 216
                 799********888999**************9999865.6************9999999999999988888732....223444444444 PP

  == domain 4  score: 5.6 bits;  conditional E-value: 0.02
     MMS19_C 366 slllpeLptLlPlLlqaLdlpdaevkastLetlksile..espslvsehlssLvprL 420
                 ++  p L+ ++PlL ++L+   + +k+ +  ++ ++ +  e+p++v+++l +L p L
  EPX70825.1 241 EVQAPTLSIMVPLLARGLNERATPIKRKAAVIIDNMSKlvEDPQVVAPFLPKLLPGL 297
                 67789999999*******999999998887777777777788999999999999987 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.0    0.0025      0.91      24      49 ..     462     485 ..     452     600 .. 0.77
   2 ?    2.4   0.1      0.21        76      23      38 ..     701     716 ..     694     728 .. 0.87

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0025
                 EEEESTTSSHHHHHHHHCCSHCCCCC CS
      NB-ARC  24 alvGmgGvGKttlakqilnksdeveg 49 
                 +l G  G+GK+tl++ i+n   +veg
  EPX70825.1 462 GLCGPNGSGKSTLMRAIVNG--QVEG 485
                 689***************98..5554 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.21
                 EEEEESTTSSHHHHHH CS
      NB-ARC  23 valvGmgGvGKttlak 38 
                 +a+ G  G GK+tl+k
  EPX70825.1 701 IAVIGPNGAGKSTLIK 716
                 899***********97 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0      0.02       7.4      30      56 ..     455     481 ..     449     491 .. 0.84
   2 ?    5.0   0.0     0.041        15      33      57 ..     698     722 ..     689     735 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.02
       AAA_7  30 lknkkpvllvGptGtGKtviikdllkk 56 
                 lk+++   l+Gp G+GK+++++ +++ 
  EPX70825.1 455 LKRGRRYGLCGPNGSGKSTLMRAIVNG 481
                 678888899************997664 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.041
       AAA_7  33 kkpvllvGptGtGKtviikdllkkl 57 
                 +  + ++Gp G GK+++ik l+ +l
  EPX70825.1 698 SSRIAVIGPNGAGKSTLIKVLTGEL 722
                 567889************9877665 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.0      0.02       7.1      58      88 ..     463     496 ..     448     503 .. 0.80
   2 ?    4.7   0.0     0.039        14      56      77 ..     701     722 ..     692     746 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.02
      DUF815  58 LwGarGtGKSslvkallneyaeeg...Lrlieve 88 
                 L G  G+GKS+l++a++n   e     Lr + ve
  EPX70825.1 463 LCGPNGSGKSTLMRAIVNGQVEGFpthLRTVYVE 496
                 889*************997655434447766665 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.039
      DUF815  56 vLLwGarGtGKSslvkallney 77 
                 + ++G  G+GKS+l+k l+ e+
  EPX70825.1 701 IAVIGPNGAGKSTLIKVLTGEL 722
                 6679************999876 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.1      0.37   1.4e+02      27      42 ..     463     478 ..     458     481 .. 0.88
   2 ?    8.6   0.0    0.0029       1.1      25      65 ..     701     742 ..     692     757 .. 0.83

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.37
  Mg_chelatase  27 lvGppGsGKtmlakrl 42 
                   l+Gp GsGK+ l +++
    EPX70825.1 463 LCGPNGSGKSTLMRAI 478
                   79*********99876 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0029
  Mg_chelatase  25 lllvGppGsGKtmlakrlps.llpplseeealevakiasvag 65 
                   + ++Gp G+GK+ l+k l++ llp   +  ++e  +ia va+
    EPX70825.1 701 IAVIGPNGAGKSTLIKVLTGeLLPTTGDIYQHENCRIAYVAQ 742
                   6789**************864899888888888888887776 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0      0.21        77      57     112 ..      94     149 ..      90     154 .. 0.86
   2 ?    2.0   0.0      0.29     1e+02      21      38 ..     463     480 ..     450     500 .. 0.86
   3 ?    3.7   0.0     0.086        32      22      40 ..     704     722 ..     699     730 .. 0.82

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.21
  Zeta_toxin  57 lhPeyeeilkadpkkaseltqkdaselvekllqeaiengyniivegtlrspdvvkk 112
                 l P + e  ++++ ++ e ++k+++ +v+++ ++a+++ + i++e+  ++  +++k
  EPX70825.1  94 LLPAVVEKVADKQLNVREAASKASRAIVRSTSAYAVKATVPIVLESIHSTGKWTEK 149
                 66777787888888999999*************************98888877776 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.29
  Zeta_toxin  21 lgGqpGAGKselaellkd 38 
                 l G  G+GKs+l++++ +
  EPX70825.1 463 LCGPNGSGKSTLMRAIVN 480
                 77999********99865 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.086
  Zeta_toxin  22 gGqpGAGKselaellkdel 40 
                  G  GAGKs+l++ l+ el
  EPX70825.1 704 IGPNGAGKSTLIKVLTGEL 722
                 5889*********999887 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0      0.27        97       6      27 ..     463     484 ..     459     511 .. 0.78
   2 ?    7.6   0.0    0.0082         3       2      26 ..     699     723 ..     698     732 .. 0.91

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.27
   PduV-EutP   6 liGkvgsGKttLtqalkgeelk 27 
                 l G+ gsGK tL++a+ + +++
  EPX70825.1 463 LCGPNGSGKSTLMRAIVNGQVE 484
                 789************9887765 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0082
   PduV-EutP   2 kkilliGkvgsGKttLtqalkgeel 26 
                 ++i +iG+ g+GK tL + l+ge l
  EPX70825.1 699 SRIAVIGPNGAGKSTLIKVLTGELL 723
                 6899****************99866 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.055        20       3      21 ..     462     480 ..     460     490 .. 0.83
   2 ?    5.5   0.1     0.041        15       1      23 [.     700     722 ..     700     730 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.055
                 EEE--TTSSHHHHHHHHHH CS
    NTPase_1   3 fiTGppGvGKtTlvkkvle 21 
                  + Gp G+GK+Tl++ +++
  EPX70825.1 462 GLCGPNGSGKSTLMRAIVN 480
                 689***********99886 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.041
                 EEEEE--TTSSHHHHHHHHHHHH CS
    NTPase_1   1 kvfiTGppGvGKtTlvkkvlell 23 
                 ++++ Gp G GK+Tl+k ++ +l
  EPX70825.1 700 RIAVIGPNGAGKSTLIKVLTGEL 722
                 58899***********9877665 PP

>> HTH_ParB  HTH domain found in ParB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.1    0.0047       1.7      30      46 ..      96     112 ..      91     118 .. 0.84
   2 ?    1.8   0.0      0.59   2.1e+02       9      27 ..     847     865 ..     843     869 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0047
    HTH_ParB  30 lqlaekiieegLsVRet 46 
                  +++ek+++++L+VRe+
  EPX70825.1  96 PAVVEKVADKQLNVREA 112
                 589*************8 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.59
    HTH_ParB   9 egkiseGHARaLlslkdee 27 
                 +g++ e+HA+  + ++  e
  EPX70825.1 847 RGELMESHAKMVAEVDRAE 865
                 799********99999876 PP

>> PIN7  PIN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0    0.0018      0.66      59      97 ..     573     612 ..     552     616 .. 0.88
   2 ?   -0.1   0.0       4.1   1.5e+03      40      92 ..     792     844 ..     763     852 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.0018
        PIN7  59 gknalDFhlasylGyliaeekeaefviiskDkGf.dplie 97 
                  +n lD   + +l  +++++k+++ +i+s+D+Gf d++++
  EPX70825.1 573 PTNHLDVVNVAWLENFLTSQKNVSSIIVSHDSGFlDHVVQ 612
                 5799*****************************9667765 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 4.1
        PIN7  40 vkklaelgkkielikikkkgknalDFhlasylGyliaeekeaefviiskDkGf 92 
                 + k++ + +ki  i+ ++k kn+  ++ ++ +G+ i  ++e  +  +s D+ +
  EPX70825.1 792 IFKIEGTPRKILGIHSRRKLKNSYEYECSFTVGENIGMKSERWVPMMSSDNAW 844
                 44555566788888999999*******************99999999999866 PP

>> MutS_V  MutS domain V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.1     0.052        19       4      18 ..     464     478 ..     462     482 .. 0.90
   2 ?    5.0   0.0     0.061        22       3      41 ..     703     740 ..     701     758 .. 0.72

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.052
                 E-STTSSHHHHHHHH CS
      MutS_V   4 tGpnmaGkstylrqv 18 
                  Gpn +Gkst++r +
  EPX70825.1 464 CGPNGSGKSTLMRAI 478
                 7************86 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.061
                 EE-STTSSHHHHHHHHHHHHHHHHHT--BSSSEEEEE-- CS
      MutS_V   3 itGpnmaGkstylrqvalivllaqiGsfvpaekaeisiv 41 
                 + Gpn aGkst+++      ll  +G     e+++i+ v
  EPX70825.1 703 VIGPNGAGKSTLIKVL-TGELLPTTGDIYQHENCRIAYV 740
                 78**********9865.4566666666666666666655 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.1      0.02       7.3      20      50 ..      85     115 ..      73     116 .. 0.78
   2 ?    0.1   0.0       3.5   1.3e+03      22      49 ..     243     271 ..     239     273 .. 0.77
   3 ?    0.7   0.0       2.2   8.2e+02      17      33 ..     281     297 ..     278     322 .. 0.86

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.02
     HEAT_EZ  20 ellqplvpeilpaLlalLnddsdeVRaaAag 50 
                  +++p++ e+lpa +    d++ +VR+aA  
  EPX70825.1  85 ADVEPYLVELLPAVVEKVADKQLNVREAASK 115
                 57889999999999999999999*****975 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 3.5
     HEAT_EZ  22 lqplvpeilpaLlalLnddsdeV.RaaAa 49 
                 ++p ++ ++p+L+++Ln    ++ R+aA+
  EPX70825.1 243 QAPTLSIMVPLLARGLNERATPIkRKAAV 271
                 66777789999999998777788888887 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 2.2
     HEAT_EZ  17 gepellqplvpeilpaL 33 
                 + p+ ++p++p++lp L
  EPX70825.1 281 EDPQVVAPFLPKLLPGL 297
                 67899999999999988 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0     0.067        25      21      42 ..     460     481 ..     440     489 .. 0.81
   2 ?    4.7   0.0     0.078        29      19      42 ..     698     721 ..     683     729 .. 0.79

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.067
                 EEEEEESTTSSHHHHHHHHHHH CS
        TsaE  21 vilLeGdLGaGKTtlvrglaka 42 
                    L G+ G+GK+tl+r+++++
  EPX70825.1 460 RYGLCGPNGSGKSTLMRAIVNG 481
                 467999*************986 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.078
                 TEEEEEEESTTSSHHHHHHHHHHH CS
        TsaE  19 gdvilLeGdLGaGKTtlvrglaka 42 
                 ++ i+  G+ GaGK+tl++ l  +
  EPX70825.1 698 SSRIAVIGPNGAGKSTLIKVLTGE 721
                 5569999************98765 PP

>> Adeno_IVa2  Adenovirus IVa2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0      0.02       7.4      93     111 ..     464     482 ..     461     494 .. 0.88
   2 ?    3.5   0.0     0.068        25      83     108 ..     695     719 ..     633     727 .. 0.77

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.02
  Adeno_IVa2  93 yGPtGsGksqllrnlissk 111
                  GP GsGks l+r+++  +
  EPX70825.1 464 CGPNGSGKSTLMRAIVNGQ 482
                 69************99876 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.068
  Adeno_IVa2  83 yglqPviGviyGPtGsGksqllrnli 108
                 + l   i vi GP G+Gks l++ l 
  EPX70825.1 695 VSLSSRIAVI-GPNGAGKSTLIKVLT 719
                 4455667766.***********9875 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0     0.045        16     135     152 ..     464     481 ..     451     530 .. 0.72
   2 ?    4.2   0.0     0.051        19     126     160 ..     695     729 ..     662     746 .. 0.77

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.045
       T2SSE 135 sGgTgsGKttllyallke 152
                  G+ gsGK+tl+ a+++ 
  EPX70825.1 464 CGPNGSGKSTLMRAIVNG 481
                 7***********888753 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.051
       T2SSE 126 vrerglilvsGgTgsGKttllyallkeinksderi 160
                 v+    i v G+ g GK+tl+ +l  e+  ++  i
  EPX70825.1 695 VSLSSRIAVIGPNGAGKSTLIKVLTGELLPTTGDI 729
                 4556778999***********99998876665555 PP

>> AAA_13  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.029        10      23      42 ..     465     484 ..     456     530 .. 0.85
   2 ?    3.4   0.0     0.067        24      22      38 ..     704     720 ..     695     748 .. 0.77

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.029
      AAA_13  23 GwNGaGKTtLSrllrslelg 42 
                 G NG+GK+tL r++ + + +
  EPX70825.1 465 GPNGSGKSTLMRAIVNGQVE 484
                 99**********99887654 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.067
      AAA_13  22 YGwNGaGKTtLSrllrs 38 
                  G NGaGK+tL ++l  
  EPX70825.1 704 IGPNGAGKSTLIKVLTG 720
                 49*********999876 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0       0.1        37      51      71 ..     462     482 ..     450     497 .. 0.81
   2 ?    4.4   0.0     0.075        28      45      67 ..     696     718 ..     672     730 .. 0.80

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.1
   IstB_IS21  51 vllGpsGvGKshlaialgvea 71 
                  l+Gp G GKs l  a+    
  EPX70825.1 462 GLCGPNGSGKSTLMRAIVNGQ 482
                 59***********99987655 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.075
   IstB_IS21  45 ekkenivllGpsGvGKshlaial 67 
                 + +  i+++Gp G+GKs l   l
  EPX70825.1 696 SLSSRIAVIGPNGAGKSTLIKVL 718
                 5567899**********997665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1045 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       797  (0.0444531); expected 358.6 (0.02)
Passed bias filter:                      701  (0.0390987); expected 358.6 (0.02)
Passed Vit filter:                       102  (0.00568911); expected 17.9 (0.001)
Passed Fwd filter:                        49  (0.002733); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              49  [number of targets reported over threshold]
# CPU time: 0.97u 0.30s 00:00:01.27 Elapsed: 00:00:00.45
# Mc/sec: 7037.68
//
Query:       EPX70826.1  [L=1103]
Description: hypothetical protein SOCG_04131 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-19   70.3   2.3    1.1e-19   70.3   2.3   13.2 14  Cnn_1N        Centrosomin N-terminal motif 1
    6.8e-19   67.9   5.1    6.8e-19   67.9   5.1    6.2  6  Mto2_bdg      Micro-tubular organiser Mto1 C-term Mto2-bindin
     0.0023   16.9  17.6     0.0023   16.9  17.6    6.8  8  Spc7          Spc7 kinetochore protein
     0.0029   17.3  30.9     0.0029   17.3  30.9    8.3  7  Lebercilin    Ciliary protein causing Leber congenital amauro
     0.0075   16.5  10.3     0.0075   16.5  10.3    9.0 10  Fib_alpha     Fibrinogen alpha/beta chain family
     0.0081   16.2   3.5     0.0081   16.2   3.5    9.3 11  DUF1664       Protein of unknown function (DUF1664)
  ------ inclusion threshold ------
       0.42   11.1   2.1          9    6.9   0.1    3.7  2  DALR_2        DALR domain
        2.7    8.3  26.3       0.28   11.5   0.3    6.4  5  DUF948        Bacterial protein of unknown function (DUF948)
        4.6    7.4  18.2       0.23   11.5   0.8    6.4  7  DUF1192       Protein of unknown function (DUF1192)


Domain annotation for each model (and alignments):
>> Cnn_1N  Centrosomin N-terminal motif 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.4       2.1   4.1e+03       2      15 ..     226     239 ..     225     240 .. 0.92
   2 !   70.3   2.3   5.5e-23   1.1e-19       1      71 [.     250     320 ..     250     322 .. 0.98
   3 ?    3.3   0.6     0.048        95      34      71 ..     323     360 ..     320     362 .. 0.89
   4 ?    0.2   0.1      0.44   8.7e+02      49      69 ..     389     409 ..     366     412 .. 0.77
   5 ?   -0.3   0.4      0.59   1.2e+03      36      60 ..     448     465 ..     423     477 .. 0.60
   6 !    8.3   2.8    0.0013       2.6      13      72 ..     479     549 ..     473     550 .. 0.86
   7 ?    5.2   2.1     0.012        24      36      72 ..     587     623 ..     558     624 .. 0.69
   8 !    9.2   1.8   0.00065       1.3      22      69 ..     640     686 ..     629     691 .. 0.87
   9 ?   -1.4  13.3       1.4   2.8e+03      15      72 ..     661     717 ..     659     770 .. 0.89
  10 ?    0.5   1.8      0.34   6.8e+02      36      69 ..     785     818 ..     763     822 .. 0.62
  11 ?   -3.5   7.2         6   1.2e+04      28      60 ..     812     844 ..     789     856 .. 0.53
  12 ?   -3.2   0.3       4.8   9.6e+03      53      63 ..     885     895 ..     871     905 .. 0.53
  13 ?    5.4   0.4      0.01        21      30      71 ..     940     981 ..     933     983 .. 0.81
  14 ?    0.6   0.6      0.32   6.4e+02      21      51 ..    1043    1083 ..    1039    1094 .. 0.65

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 2.1
      Cnn_1N   2 lrEqeeqidkLkKE 15 
                 ++E+ee+ + L+KE
  EPX70826.1 226 MKEMEEKKSVLSKE 239
                 89**********99 PP

  == domain 2  score: 70.3 bits;  conditional E-value: 5.5e-23
      Cnn_1N   1 TlrEqeeqidkLkKENFdLKLriyfLeerleklseeqkeellkenielkveveslqkelkekkkllreaek 71 
                 Tl+Eq ++id+L+KE F+LKL+++fL ++l+k +++++++++k+ni+lk+   +lq+ + +++k++ + ek
  EPX70826.1 250 TLKEQANVIDNLRKEAFGLKLKCFFLYDQLNKFHDSEVQDIMKQNIDLKTVTLQLQRAVATYEKKIASYEK 320
                 9******************************************************************9998 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.048
      Cnn_1N  34 seeqkeellkenielkveveslqkelkekkkllreaek 71 
                 s++++++l ++   lk++  +   el++ kk l +ae+
  EPX70826.1 323 STDSSDALQSKFFHLKQKYSETLSELQSTKKALIKAEN 360
                 5688999999999**********************997 PP

  == domain 4  score: 0.2 bits;  conditional E-value: 0.44
      Cnn_1N  49 kveveslqkelkekkkllrea 69 
                 + e e+l +e+++++ ll + 
  EPX70826.1 389 RREKETLLQEVDSLRSLLAQK 409
                 568999999999999999885 PP

  == domain 5  score: -0.3 bits;  conditional E-value: 0.59
      Cnn_1N  36 eqkeellkenielkveveslqkelk 60 
                 e+k++       l +e+e+l+ el+
  EPX70826.1 448 EEKNK-------LIQEMEELRSELD 465
                 33333.......4444444444444 PP

  == domain 6  score: 8.3 bits;  conditional E-value: 0.0013
      Cnn_1N  13 kKENFdLKLri...........yfLeerleklseeqkeellkenielkveveslqkelkekkkllreaeka 72 
                 k+E +dL + +             L ++le+++ +  ++l+k   + k++v +lq+ ++e+++ l+ a+++
  EPX70826.1 479 KNEIWDLMMTCkmktqeqavelSQLYKQLEEIEYDCENKLVKMEQQWKDDVDQLQQYVEELTQDLHTAKSE 549
                 6788888777777778888777889999999999*******************************999765 PP

  == domain 7  score: 5.2 bits;  conditional E-value: 0.012
      Cnn_1N  36 eqkeellkenielkveveslqkelkekkkllreaeka 72 
                 e++    +e  +l +e+ +l k+ +ek ++l+e+e++
  EPX70826.1 587 ESIGLFKEEVEKLTDELSNLSKSYHEKSDRLKESESK 623
                 4444455666679999999999999999999999875 PP

  == domain 8  score: 9.2 bits;  conditional E-value: 0.00065
      Cnn_1N  22 riyfLeerleklseeqkeellkenielkveveslqkelkekkkllrea 69 
                 +i+ L+++le++++   +++ +en  lk+++es+  e++++k++  e+
  EPX70826.1 640 EINSLNSQLENSNK-LWQSATDENGSLKEKIESMYTEIESLKNHNLES 686
                 68999999999888.9************************99875555 PP

  == domain 9  score: -1.4 bits;  conditional E-value: 1.4
      Cnn_1N  15 ENFdLKLriyfLeerleklseeqkeellkenielkveveslqkelkekkkllreaeka 72 
                 EN +LK +i  +  ++e l++ ++ e  ++  el+ +ve+l+ e++++k + ++ +ka
  EPX70826.1 661 ENGSLKEKIESMYTEIESLKN-HNLESSQKESELQKRVEELTTEINRLKHSQEDESKA 717
                 888999999999999999999.555555557899999999999999999988887776 PP

  == domain 10  score: 0.5 bits;  conditional E-value: 0.34
      Cnn_1N  36 eqkeellkenielkveveslqkelkekkkllrea 69 
                 +q+++l +e   l  e+e+ +++ ++ ++ ++e 
  EPX70826.1 785 RQVQKLKDEGNRLNSEMEKSTRQFNRNEQIIKER 818
                 5666666666666666666666666666666665 PP

  == domain 11  score: -3.5 bits;  conditional E-value: 6
      Cnn_1N  28 erleklseeqkeellkenielkveveslqkelk 60 
                 e++ k +e ++e++  e  elk  +es ++++k
  EPX70826.1 812 EQIIKEREASMESIQLEKKELKALLESERRSKK 844
                 222233334555555555555555555555555 PP

  == domain 12  score: -3.2 bits;  conditional E-value: 4.8
      Cnn_1N  53 eslqkelkekk 63 
                 + l+++++e++
  EPX70826.1 885 KRLKDQIEERN 895
                 33333333333 PP

  == domain 13  score: 5.4 bits;  conditional E-value: 0.01
      Cnn_1N  30 leklseeqkeellkenielkveveslqkelkekkkllreaek 71 
                 lek  +  k+++     + kve+ +l  +l+++ k+l ++e+
  EPX70826.1 940 LEKFVQGFKRKCKTMERDFKVEIGKLDTSLEARSKKLSQLEE 981
                 4555556667777777899********************997 PP

  == domain 14  score: 0.6 bits;  conditional E-value: 0.32
      Cnn_1N   21 LriyfLeerleklse..........eqkeellkenielkve 51  
                  Lr+ ++e +l++ +e          e  ++l+k+n  l ++
  EPX70826.1 1043 LRLREMEFQLKAEQEgrkrdkvgarERLQDLVKQNRSLSQQ 1083
                  55556666666655555666666666667777777666655 PP

>> Mto2_bdg  Micro-tubular organiser Mto1 C-term Mto2-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.3       4.4   8.7e+03      31      46 ..     422     437 ..     419     441 .. 0.81
   2 ?   -1.8   0.7         2     4e+03      18      48 ..     614     644 ..     611     647 .. 0.78
   3 ?    1.7   0.6      0.17   3.3e+02      32      51 ..     691     710 ..     680     711 .. 0.85
   4 ?   -3.6   1.7       7.6   1.5e+04      12      33 ..     831     852 ..     826     860 .. 0.52
   5 ?   -1.9   0.6       2.2   4.4e+03      28      46 ..     884     903 ..     875     909 .. 0.64
   6 !   67.9   5.1   3.4e-22   6.8e-19       1      51 [.    1040    1090 ..    1040    1091 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 4.4
    Mto2_bdg  31 LeelkaeNrlLkaeLe 46 
                 ++ l++ N lL+  L 
  EPX70826.1 422 IQSLQRTNDLLRKDLG 437
                 6789999999998885 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 2
    Mto2_bdg  18 eaRlldrsgarerLeelkaeNrlLkaeLerd 48 
                   Rl   ++  ++L ++ +    L++e++ +
  EPX70826.1 614 SDRLKESESKVAELCQKLEDSNTLSTEINSL 644
                 5677777888899999999999999999976 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.17
    Mto2_bdg  32 eelkaeNrlLkaeLerdrsh 51 
                 +el+++ ++L++e++r++ +
  EPX70826.1 691 SELQKRVEELTTEINRLKHS 710
                 578888899*******9976 PP

  == domain 4  score: -3.6 bits;  conditional E-value: 7.6
    Mto2_bdg  12 qLkaereaRlldrsgarerLee 33 
                  Lka  e  ++ ++  + +L+ 
  EPX70826.1 831 ELKALLESERRSKKVMQSELDA 852
                 3444444444555555555555 PP

  == domain 5  score: -1.9 bits;  conditional E-value: 2.2
    Mto2_bdg  28 rerLeelkae.NrlLkaeLe 46 
                  +rL+++++e N l k+ ++
  EPX70826.1 884 EKRLKDQIEErNNLIKTVIS 903
                 46676665442666666555 PP

  == domain 6  score: 67.9 bits;  conditional E-value: 3.4e-22
    Mto2_bdg    1 kwleRLreLerqLkaereaRlldrsgarerLeelkaeNrlLkaeLerdrsh 51  
                  +w+ RLre+e+qLkae+e+R++d+ garerL++l ++Nr+L+ ++  d+ +
  EPX70826.1 1040 IWQLRLREMEFQLKAEQEGRKRDKVGARERLQDLVKQNRSLSQQITFDKNS 1090
                  6********************************************998876 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   4.9      0.25     5e+02     154     226 ..     286     359 ..     250     365 .. 0.54
   2 ?   -4.4  10.5       3.6   7.1e+03     153     271 ..     285     405 ..     275     417 .. 0.62
   3 ?   -4.5  19.0       3.6   7.2e+03     163     291 ..     379     523 ..     375     527 .. 0.54
   4 !   16.9  17.6   1.2e-06    0.0023     137     254 ..     529     649 ..     524     662 .. 0.79
   5 !   10.8  22.6   7.9e-05      0.16     142     280 ..     663     799 ..     655     801 .. 0.89
   6 ?    1.5  19.3     0.056   1.1e+02     139     250 ..     789     905 ..     784     912 .. 0.69
   7 ?    1.5   0.1     0.057   1.1e+02     178     229 ..     932     983 ..     921     990 .. 0.73
   8 ?   -2.9   1.3       1.2   2.5e+03     177     234 ..    1021    1082 ..    1001    1097 .. 0.60

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.25
        Spc7 154 dkelLekqeeeldellpeleeekaeleeeleklqeaaeelesid..keeLeelreelaelkaeieekkkelaelq 226
                 + + ++kq+  l+++  +l++  a+ e+++++ +++    +s+d  + +   l+++ +e  +e+++ kk l + +
  EPX70826.1 286 EVQDIMKQNIDLKTVTLQLQRAVATYEKKIASYEKKPS-TDSSDalQSKFFHLKQKYSETLSELQSTKKALIKAE 359
                 34445555555555555555555555555555544333.233333445555555555555555555555544444 PP

  == domain 2  score: -4.4 bits;  conditional E-value: 3.6
        Spc7 153 edkelLekqeeeldellpeleeekaeleeeleklqeaaeelesid..keeLeelreelaelkaeieekkkelaelqeqlee.leekieelkeqkselee 248
                 ++ + ++kq+  l+++  +l++  a+ e+++++ +++    +s+d  + +   l+++ +e  +e+++ kk l + ++++ + ++ + +  + + +++ +
  EPX70826.1 285 SEVQDIMKQNIDLKTVTLQLQRAVATYEKKIASYEKKPS-TDSSDalQSKFFHLKQKYSETLSELQSTKKALIKAENERRTpSNPTYDPYHGNEKDTLS 382
                 456777788888888888888888888888887777554.35555567777888888888888887776666665555443144455555555566666 PP

        Spc7 249 eiaeaervleeckgwsesevsrl 271
                  + e+er  +e+   + + +++l
  EPX70826.1 383 SLLESERREKETLLQEVDSLRSL 405
                 66666655555544444444444 PP

  == domain 3  score: -4.5 bits;  conditional E-value: 3.6
        Spc7 163 eeldellpeleeekaeleeeleklqe.............aaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelk....eqks 244
                 + l++ll++ ++ek++l +e+++l++              ++ ++s+ +     lr++l ++++    +++e ++l +++eel+++++++k    ++ +
  EPX70826.1 379 DTLSSLLESERREKETLLQEVDSLRSllaqksqiqprtpDERVIQSL-QRTNDLLRKDLGAQNEAFLFQMEEKNKLIQEMEELRSELDAAKlntiAEAE 476
                 56667777777777777777777777444332233333222222222.333345788888888766666666666666666666666655530004444 PP

        Spc7 245 eleeeiaeaervleeckgwsesevsrlkeevkaleeltgwkivslsg 291
                   ++ei     +++++ + ++ e+s+l ++++++e   + k+v++++
  EPX70826.1 477 ASKNEIWDLMMTCKMKTQEQAVELSQLYKQLEEIEYDCENKLVKMEQ 523
                 44455555555555555555557777777777777777777777765 PP

  == domain 4  score: 16.9 bits;  conditional E-value: 1.2e-06
        Spc7 137 legLkegleenlegleedkelLekqeeeldellpeleeekaeleeeleklqeaaeeles...idkeeLeelreelaelkaeieekkkelaelqeqleel 232
                 +++L++ +ee  ++l + k++L+k+ +  +++ ++l+  k + e+e+++  +  +e e+   + kee+e+l +el++l++ ++ek+++l+e +++++el
  EPX70826.1 529 VDQLQQYVEELTQDLHTAKSELTKSVNDSHAYEQALNDLKRDTEAEINHFDKTIRENEEsigLFKEEVEKLTDELSNLSKSYHEKSDRLKESESKVAEL 627
                 678999999999999999999999999999999999999999999999999966555554445599999999999999999999999999999999999 PP

        Spc7 233 eekieelkeqkseleeeiaeae 254
                  +k+e+ ++  +e+++  ++ e
  EPX70826.1 628 CQKLEDSNTLSTEINSLNSQLE 649
                 9999887766655544333332 PP

  == domain 5  score: 10.8 bits;  conditional E-value: 7.9e-05
        Spc7 142 egleenlegleedkelLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelk 240
                  +l+e++e++ ++ e L++++ e ++   el+++ +el+ e+++l+  +e+    +++ +++l  +l+e k e++   +e a++ ++le+le++ + l+
  EPX70826.1 663 GSLKEKIESMYTEIESLKNHNLESSQKESELQKRVEELTTEINRLKHSQED----ESKAIHTLSTQLEEKKRELSTVAQEKATVLKNLEALENRYTVLQ 757
                 5799*******************************************6665....799***************************************** PP

        Spc7 241 eqkseleeeiaea..ervleeckgwsesevsrlkeevkalee 280
                 +++s+l+++i e   ++v +   +    +v++lk+e ++l +
  EPX70826.1 758 NSYSSLQSAILETfdKKVEHCSAELLVRQVQKLKDEGNRLNS 799
                 **********98543555555667888999999998887765 PP

  == domain 6  score: 1.5 bits;  conditional E-value: 0.056
        Spc7 139 gLkegleenlegleedkelLekqeeelde...llpeleeekaeleeeleklqeaaeeles.idkeeLeelreelaelkaeiee.kkkelaelqeqleel 232
                 +Lk++ ++  +++e+  ++ +++e+ ++e    +++++ ek+el++ le++++ ++ ++s +d  +L+++r++l++ ++  ++ +++e + lq+  ++l
  EPX70826.1 789 KLKDEGNRLNSEMEKSTRQFNRNEQIIKEreaSMESIQLEKKELKALLESERRSKKVMQSeLDALSLQNTRRSLSNSSSPSDRsQSREFKLLQNSEKRL 887
                 5555555555666666666655555554311134445556666666666666655555554999***********998877651678999********* PP

        Spc7 233 eekieelkeqkseleeei 250
                 +++iee ++ ++++ +++
  EPX70826.1 888 KDQIEERNNLIKTVISRL 905
                 *********999987765 PP

  == domain 7  score: 1.5 bits;  conditional E-value: 0.057
        Spc7 178 eleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeql 229
                  ++ +l++l+++++ ++   k+  + ++ e+ +l++ +e+++k+l++l+e+ 
  EPX70826.1 932 VMHGQLKELEKFVQGFKRKCKTMERDFKVEIGKLDTSLEARSKKLSQLEERF 983
                 5556777777777777776666667888888888888888888888888765 PP

  == domain 8  score: -2.9 bits;  conditional E-value: 1.2
        Spc7  177 aeleeeleklqeaaeelesidkeeLeelreelaelkaeieekk....kelaelqeqleelee 234 
                  +++++ ++ l++ ae ++ i + +L+e+  +l++ ++  ++ k    ++l++l +q  +l++
  EPX70826.1 1021 SAVQRGITALKRDAEGMSHIWQLRLREMEFQLKAEQEGRKRDKvgarERLQDLVKQNRSLSQ 1082
                  56677777777777777777777777777777655543332220000233333333333333 PP

>> Lebercilin  Ciliary protein causing Leber congenital amaurosis disease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -8.3  11.7         9   1.8e+04      28     144 ..     288     403 ..     275     426 .. 0.59
   2 ?   -7.5   9.9         9   1.8e+04     133     175 ..     422     464 ..     378     476 .. 0.59
   3 ?   -5.3  16.2         9   1.8e+04      92     191 ..     452     548 ..     420     550 .. 0.57
   4 !   17.3  30.9   1.5e-06    0.0029      14     188 ..     537     713 ..     530     718 .. 0.85
   5 ?  -13.7  32.6         9   1.8e+04       8     176 ..     727     895 ..     716     908 .. 0.63
   6 !    5.3   0.5     0.007        14     124     172 ..     935     983 ..     928     989 .. 0.85
   7 ?    0.1   1.4      0.28   5.5e+02     146     186 ..    1042    1084 ..    1004    1093 .. 0.66

  Alignments for each domain:
  == domain 1  score: -8.3 bits;  conditional E-value: 9
  Lebercilin  28 eelrkEnklLkrlqkrqekaLskyedteaeLpqllarhneEvrvlrerlRksqekerelekklkekeaellrlkdklkklkk.LsedknLaereeLqkk 125
                 +++ k n  Lk++    ++a   ye++ a+  +     ++   +l+ ++ ++++k++e+ ++l+++ ++l +++++ ++ ++   +  + +e+++L++ 
  EPX70826.1 288 QDIMKQNIDLKTVTLQLQRAVATYEKKIASYEKK--PSTDSSDALQSKFFHLKQKYSETLSELQSTKKALIKAENERRTPSNpTYDPYHGNEKDTLSSL 384
                 4444444445555555455554444444444332..233334456666666677777777777777777777777776666655555666666666666 PP

  Lebercilin 126 LeeleakleekeekikeLe 144
                 Le+ + + e+  +++++L+
  EPX70826.1 385 LESERREKETLLQEVDSLR 403
                 6666666666666666665 PP

  == domain 2  score: -7.5 bits;  conditional E-value: 9
  Lebercilin 133 leekeekikeLerkleleeksfrrqlaaekkktkeaqeevkal 175
                 +++ +++++ L++ l  ++++f  q++ ++k ++e++e  ++l
  EPX70826.1 422 IQSLQRTNDLLRKDLGAQNEAFLFQMEEKNKLIQEMEELRSEL 464
                 3444455555555555555555555555555555555444333 PP

  == domain 3  score: -5.3 bits;  conditional E-value: 9
  Lebercilin  92 ekeaellrlkdklk..klkkLsedknLaereeLqkkLeeleakleekeekikeLerkleleeksfrrqlaaekkktkeaqeevkalqeeierlkqklke 188
                 +  +e+++l+++l+  kl+ ++e+   a ++e+   + + + k +e+  ++++L ++le  e   + +l    k++++ +++v++lq+ +e+l+q+l+ 
  EPX70826.1 452 KLIQEMEELRSELDaaKLNTIAEAE--ASKNEIWDLMMTCKMKTQEQAVELSQLYKQLEEIEYDCENKL---VKMEQQWKDDVDQLQQYVEELTQDLHT 545
                 2333333333333300233333222..234455555667777777777788888887776666665554...567777888888888888888888887 PP

  Lebercilin 189 Ker 191
                    
  EPX70826.1 546 AKS 548
                 655 PP

  == domain 4  score: 17.3 bits;  conditional E-value: 1.5e-06
  Lebercilin  14 keLqnelaelqskleelrkE....nklLkrlqkrqekaLskyedteaeLpqllarhneEvrvlrerlRksqekerelekklkekeaellrlkdklkklk 108
                 +eL++ l++++s+l +  ++     ++L++l++  e++++++++t  e  + +   +eEv+ l ++l ++ ++++e + +lke+e+++ +l +kl++ +
  EPX70826.1 537 EELTQDLHTAKSELTKSVNDshayEQALNDLKRDTEAEINHFDKTIRENEESIGLFKEEVEKLTDELSNLSKSYHEKSDRLKESESKVAELCQKLEDSN 635
                 667777776666666666652222799**************************************************************9999999999 PP

  Lebercilin 109 kLsedknLaereeLqkkLeeleakleekeekikeLerklelee...ksfrrqlaaekkktkeaqeevkalqeeierlkqklke 188
                  Ls      e + L+++Le+ ++  ++++ ++ +L+ k+e +    +s + +   +++k++e+q++v++l++ei+rlk++ ++
  EPX70826.1 636 TLS-----TEINSLNSQLENSNKLWQSATDENGSLKEKIESMYteiESLKNHNLESSQKESELQKRVEELTTEINRLKHSQED 713
                 999.....89999**************************9876112567778888899*******************997665 PP

  == domain 5  score: -13.7 bits;  conditional E-value: 9
  Lebercilin   8 arllkikeLqnelaelqskleelrkEnklLkr.lqkrqekaLskyedteae.....LpqllarhneEvrvlrerlRksqekerelekklkekeaellrl 100
                 ++++++  + +e a++ ++le+l++   +L++     q++ L+ ++++ ++     L + +++ ++E   l+ ++ ks  + ++ e+ +ke+ea ++++
  EPX70826.1 727 EKKRELSTVAQEKATVLKNLEALENRYTVLQNsYSSLQSAILETFDKKVEHcsaelLVRQVQKLKDEGNRLNSEMEKSTRQFNRNEQIIKEREASMESI 825
                 455555556666666666666666666666652455677777777765443222225567788888888888888888888888888888888888888 PP

  Lebercilin 101 kdklkklkkLsedknLaereeLqkkLeeleakleekeekikeLerkleleeksfrrqlaaekkktkeaqeevkalq 176
                 + + k+lk+L       e e+ +kk+ + e  + + +++ ++L+++   +++s++r+ +  ++++k +++++++ +
  EPX70826.1 826 QLEKKELKALL------ESERRSKKVMQSELDALSLQNTRRSLSNSSSPSDRSQSREFKLLQNSEKRLKDQIEERN 895
                 88888777655......66666777777776666666666666666666666666666555555555555544443 PP

  == domain 6  score: 5.3 bits;  conditional E-value: 0.007
  Lebercilin 124 kkLeeleakleekeekikeLerkleleeksfrrqlaaekkktkeaqeev 172
                  +L+ele+ ++  ++k k++er  ++e  + ++ l+a +kk ++++e+ 
  EPX70826.1 935 GQLKELEKFVQGFKRKCKTMERDFKVEIGKLDTSLEARSKKLSQLEERF 983
                 5799999999999999999999999999999999999999999888765 PP

  == domain 7  score: 0.1 bits;  conditional E-value: 0.28
  Lebercilin  146 kleleeksfrrqlaaekkktke..aqeevkalqeeierlkqkl 186 
                  +l+l e +f+ + ++e +k  +  a+e++++l ++ ++l+q++
  EPX70826.1 1042 QLRLREMEFQLKAEQEGRKRDKvgARERLQDLVKQNRSLSQQI 1084
                  3444455555444444444433225677777777777777766 PP

>> Fib_alpha  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.6       2.1   4.2e+03      35      74 ..      31      70 ..      28     102 .. 0.55
   2 ?   -0.6   3.5      0.68   1.4e+03      42     113 ..     285     357 ..     275     364 .. 0.71
   3 ?   -0.4   1.1      0.58   1.2e+03      39     112 ..     329     407 ..     317     415 .. 0.55
   4 ?    0.2   3.5      0.38   7.6e+02      30     102 ..     450     523 ..     441     526 .. 0.73
   5 !   16.5  10.3   3.7e-06    0.0075      26     131 ..     507     616 ..     502     620 .. 0.72
   6 !   10.5  11.7   0.00025      0.51      32     124 ..     619     710 ..     614     717 .. 0.93
   7 !    7.8  12.4    0.0017       3.4      25     136 ..     664     778 ..     662     781 .. 0.83
   8 ?   -5.1  10.6         9   1.8e+04      31     120 ..     740     831 ..     733     859 .. 0.51
   9 ?    1.8   2.9      0.12   2.5e+02      53     109 ..     854     910 ..     840     915 .. 0.84
  10 ?    0.8   0.0      0.26   5.1e+02      28      62 ..     953     987 ..     924    1010 .. 0.71

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 2.1
                HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Fib_alpha 35 kdlekleneleeisnstkeaeelvkeikdslrekqkskkd 74
                ++++ l+++l   ++s+++ ++++++ ++s  e+++ +k+
  EPX70826.1 31 EEVAILRSHLPYRKSSHSSNNDHSQTESESNVEEKTLSKP 70
                5666666666666666666666665555555555555444 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.68
                 CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHH CS
   Fib_alpha  42 neleeisnstkeaeelvkeikdslrekqkskkdn.dnvikksskeleeeilrlketidaqesnirvLqnvles 113
                 +e+++i +++ + ++++ +++  ++  +k+ +   ++  ++ss+ l+++   lk++ +++ s+++  ++ l +
  EPX70826.1 285 SEVQDIMKQNIDLKTVTLQLQRAVATYEKKIASYeKKPSTDSSDALQSKFFHLKQKYSETLSELQSTKKALIK 357
                 4678888888888888888888887777777765466677788888888888888888888777776666555 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.58
                 CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH..H...HHHHHHHHHHHHHCCCHHHHHHHCCH.HHHHHHHHHHH CS
   Fib_alpha  39 kleneleeisnstkeaeelvkeikdslrekqkskkd..n...dnvikksskeleeeilrlketidaqe.snirvLqnvle 112
                  l++++ +++++++e+ +  +++k+ l +++++ +   n   d +  + +++l    l+ +++ +++  +++  L+++l 
  EPX70826.1 329 ALQSKFFHLKQKYSETLSELQSTKKALIKAENERRTpsNptyDPYHGNEKDTLS-SLLESERREKETLlQEVDSLRSLLA 407
                 566666777777766666666666555443333222112224666666666666.5555555555554566666665554 PP

  == domain 4  score: 0.2 bits;  conditional E-value: 0.38
                 CCCCCHHHCCCCCCCCCCC.CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHH CS
   Fib_alpha  30 ekdvkkdlekleneleeis.nstkeaeelvkeikdslrekqkskkdndnvikksskeleeeilrlketidaqes 102
                 ++++ +++e+l++el+ ++ n+  eae   +ei d +   + +++++   ++++ k+lee   + ++++++ e+
  EPX70826.1 450 KNKLIQEMEELRSELDAAKlNTIAEAEASKNEIWDLMMTCKMKTQEQAVELSQLYKQLEEIEYDCENKLVKMEQ 523
                 45666888999999998873455777888888888888888888878888888889998555567777776665 PP

  == domain 5  score: 16.5 bits;  conditional E-value: 3.7e-06
                 CCCCCCCCCHHHCCCCCCCC.CCCCHHHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH CS
   Fib_alpha  26 llkyekdvkkdleklenele.eisnstkeaeelvkeikdslrekqkskkdn...dnvikksskeleeeilrlketidaqesnirvLqnvlesneqkiqk 120
                 l++ e d +++l k+e++ + ++ + ++ +eel++++++   e  ks +d+   ++++++++++ e ei+ +++ti ++e++i   ++ +e++  ++++
  EPX70826.1 507 LEEIEYDCENKLVKMEQQWKdDVDQLQQYVEELTQDLHTAKSELTKSVNDShayEQALNDLKRDTEAEINHFDKTIRENEESIGLFKEEVEKLTDELSN 605
                 666667777777777666531355555555555555555544444444443334899999*************************************** PP

                 HHHHHHHHHHH CS
   Fib_alpha 121 Leqdidqkerk 131
                 L +   +k ++
  EPX70826.1 606 LSKSYHEKSDR 616
                 *9998887765 PP

  == domain 6  score: 10.5 bits;  conditional E-value: 0.00025
                 CCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH CS
   Fib_alpha  32 dvkkdlekleneleeisnstkeaeelvkeikdslrekqkskkdndnvikksskeleeeilrlketidaqesnirvLqnvlesneqkiqkLeqd 124
                 + + ++++l ++le+ +  ++e+++l +++++s +  q+ +++n ++ +k++++   ei+ lk+   +  ++  +Lq+ +e++  +i++L+  
  EPX70826.1 619 ESESKVAELCQKLEDSNTLSTEINSLNSQLENSNKLWQSATDENGSLKEKIESMYT-EIESLKNHNLESSQKESELQKRVEELTTEINRLKHS 710
                 66789**********************************99999999999999998.*********************************975 PP

  == domain 7  score: 7.8 bits;  conditional E-value: 0.0017
                 CCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCH...HHHHHHHHHHHHHHHHHHH CS
   Fib_alpha  25 lllkyekdvkkdlekleneleeisnstkeaeelvkeikdslrekqkskkdndnvikksskeleeeilrlketidaqe...snirvLqnvlesneqkiqk 120
                  l+++ +++ +++e+l+n+  e s++++e ++ v+e+++ +++ ++s++d++++i+ +s++lee+  +l    +++    +n+++L n +  ++++ + 
  EPX70826.1 664 SLKEKIESMYTEIESLKNHNLESSQKESELQKRVEELTTEINRLKHSQEDESKAIHTLSTQLEEKKRELSTVAQEKAtvlKNLEALENRYTVLQNSYSS 762
                 57777788999*******9999999************************9*************888777766655432358999999999999999999 PP

                 HHHHHHHHHHHTTSB- CS
   Fib_alpha 121 LeqdidqkerkCkepC 136
                 L+++i +  +k  e C
  EPX70826.1 763 LQSAILETFDKKVEHC 778
                 9999976555544444 PP

  == domain 8  score: -5.1 bits;  conditional E-value: 9
                 CCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH CS
   Fib_alpha  31 kdvkkdlekleneleeisnstkeaeelvkeikdslrekqkskkdndnvikkss...keleeeilrlketidaqesnirvLqnvlesneqkiqk 120
                  +v k+le len+ + ++ns+++ ++ + e+ d+  e+ + +    + ++k++   ++l++e+++  ++ +++e+ i++    +es + + ++
  EPX70826.1 740 ATVLKNLEALENRYTVLQNSYSSLQSAILETFDKKVEHCSAEL-LVRQVQKLKdegNRLNSEMEKSTRQFNRNEQIIKEREASMESIQLEKKE 831
                 5666666666666666666666666666555555444433333.2222222220002344444444444444444444444444444443333 PP

  == domain 9  score: 1.8 bits;  conditional E-value: 0.12
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHH CS
   Fib_alpha  53 eaeelvkeikdslrekqkskkdndnvikksskeleeeilrlketidaqesnirvLqn 109
                 + +++ +++++s  +  +s++ + +++++s+k+l+++i++ ++ i++ +s++ +L +
  EPX70826.1 854 SLQNTRRSLSNSSSPSDRSQSREFKLLQNSEKRLKDQIEERNNLIKTVISRLIQLSS 910
                 55677788899999999999989999*******************999999999865 PP

  == domain 10  score: 0.8 bits;  conditional E-value: 0.26
                 CCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHH CS
   Fib_alpha  28 kyekdvkkdlekleneleeisnstkeaeelvkeik 62 
                 ++e+d+k ++ kl  +le  s++ ++ ee  + ++
  EPX70826.1 953 TMERDFKVEIGKLDTSLEARSKKLSQLEERFRLMN 987
                 45666677777777777777777666666666555 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.1      0.22   4.3e+02      85     123 ..     283     321 ..     275     322 .. 0.85
   2 ?   -3.6   0.1       5.3   1.1e+04      48      64 ..     339     355 ..     324     360 .. 0.51
   3 ?    1.6   1.3      0.13   2.6e+02      50     120 ..     381     454 ..     378     459 .. 0.77
   4 ?   -0.9   5.9      0.79   1.6e+03      70     117 ..     499     543 ..     433     549 .. 0.57
   5 !   14.4   4.0   1.4e-05     0.028      40     121 ..     526     607 ..     521     609 .. 0.88
   6 !   16.2   3.5   4.1e-06    0.0081      38     122 ..     542     629 ..     540     631 .. 0.89
   7 !    8.2   0.5    0.0012       2.4      62     108 ..     635     681 ..     629     689 .. 0.92
   8 !    8.7   6.1   0.00084       1.7      54     120 ..     690     756 ..     681     760 .. 0.87
   9 ?   -0.6   4.0      0.62   1.2e+03      44     110 ..     769     836 ..     759     854 .. 0.62
  10 ?    1.2   0.2      0.18   3.7e+02      87     121 ..     921     955 ..     853     958 .. 0.59
  11 ?    2.7   0.1     0.063   1.2e+02      41      87 ..     935     981 ..     915     990 .. 0.68

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.22
     DUF1664  85 ikeevtevredlseigedvesvkeaveglesklerieek 123
                  ++ev+++ ++  ++++   ++++av + e+k+++ e+k
  EPX70826.1 283 HDSEVQDIMKQNIDLKTVTLQLQRAVATYEKKIASYEKK 321
                 567899999988899999999************999876 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 5.3
     DUF1664  48 kqleqvseslaatkrhL 64 
                 ++  +  ++l++tk+ L
  EPX70826.1 339 QKYSETLSELQSTKKAL 355
                 33333445555555555 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.13
     DUF1664  50 leqvseslaatkrhLssridrvdkkldeqkeiskeikee..vtevredlseigedvesvkea.vegleskleri 120
                 l ++ es ++ k+ L +++d++ + l + ++i+  + +e  ++++++  + +++d+ + +ea   ++e+k + i
  EPX70826.1 381 LSSLLESERREKETLLQEVDSLRSLLAQKSQIQPRTPDErvIQSLQRTNDLLRKDLGAQNEAfLFQMEEKNKLI 454
                 566677778899*********************99976554778888888899998876655146777775555 PP

  == domain 4  score: -0.9 bits;  conditional E-value: 0.79
     DUF1664  70 rvdkkldeqkeiskeikeevtevredlseigedvesvkeavegleskl 117
                 ++ +  ++ +ei  + ++++ ++++   + ++dv+++++ ve+l + l
  EPX70826.1 499 ELSQLYKQLEEIEYDCENKLVKMEQ---QWKDDVDQLQQYVEELTQDL 543
                 3333333333333333333333332...34455555555555555544 PP

  == domain 5  score: 14.4 bits;  conditional E-value: 1.4e-05
     DUF1664  40 sdavesvskqleqvseslaatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeaveglesklerie 121
                 +d v+++ + +e++ ++l+++k +L++ ++   +  ++ +++++++++e+++  + ++e +e +   ke ve+l  +l++++
  EPX70826.1 526 KDDVDQLQQYVEELTQDLHTAKSELTKSVNDSHAYEQALNDLKRDTEAEINHFDKTIRENEESIGLFKEEVEKLTDELSNLS 607
                 6778999999999999999999999999999999999999999999999999999999999999999999999999998876 PP

  == domain 6  score: 16.2 bits;  conditional E-value: 4.1e-06
     DUF1664  38 slsdavesvskqleqvs...eslaatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeavegleskleriee 122
                  l+ a ++++k++++     ++l++ kr+ +++i++ dk++ e++e +   keev+++ ++ls++++  ++ ++  ++ esk++++ +
  EPX70826.1 542 DLHTAKSELTKSVNDSHayeQALNDLKRDTEAEINHFDKTIRENEESIGLFKEEVEKLTDELSNLSKSYHEKSDRLKESESKVAELCQ 629
                 6778888888888776544489*************************************************99999999999998865 PP

  == domain 7  score: 8.2 bits;  conditional E-value: 0.0012
     DUF1664  62 rhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvke 108
                 + Ls +i++++++l++++++ ++ ++e  +++e+++++ +++es+k+
  EPX70826.1 635 NTLSTEINSLNSQLENSNKLWQSATDENGSLKEKIESMYTEIESLKN 681
                 5799***************************************9986 PP

  == domain 8  score: 8.7 bits;  conditional E-value: 0.00084
     DUF1664  54 seslaatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeavegleskleri 120
                  ++l++  ++L+ +i+r+ +++++ +++++ ++ +++e +++ls++ ++  +v +  e le++ + +
  EPX70826.1 690 ESELQKRVEELTTEINRLKHSQEDESKAIHTLSTQLEEKKRELSTVAQEKATVLKNLEALENRYTVL 756
                 467888889**********************************************999999987665 PP

  == domain 9  score: -0.6 bits;  conditional E-value: 0.62
     DUF1664  44 esvskqleqvsesl.aatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeav 110
                 e+  k++e+ s++l  ++ ++L+++ +r++++++++++  +  ++ ++e +  +++i+ + +++k++ 
  EPX70826.1 769 ETFDKKVEHCSAELlVRQVQKLKDEGNRLNSEMEKSTRQFNRNEQIIKEREASMESIQLEKKELKALL 836
                 55566666666554134456666666666666666666666666666666666666666666665554 PP

  == domain 10  score: 1.2 bits;  conditional E-value: 0.18
     DUF1664  87 eevtevredlseigedvesvkeaveglesklerie 121
                 + +t+ ++  + ++ +++++++ v+g++ k +++e
  EPX70826.1 921 DALTTFSGMSQVMHGQLKELEKFVQGFKRKCKTME 955
                 45666667777788888888888888888888887 PP

  == domain 11  score: 2.7 bits;  conditional E-value: 0.063
     DUF1664  41 davesvskqleqvseslaatkrhLssridrvdkkldeqkeiskeike 87 
                   ++++ k ++ ++ + ++  r+++ +i ++d++l++ ++  ++++e
  EPX70826.1 935 GQLKELEKFVQGFKRKCKTMERDFKVEIGKLDTSLEARSKKLSQLEE 981
                 33444555555566777778888888888888888887777666665 PP

>> DALR_2  DALR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.1    0.0045         9      24      61 ..     552     598 ..     544     600 .. 0.78
   2 ?    1.3   0.2      0.24   4.9e+02      21      44 ..     699     721 ..     695     743 .. 0.62

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0045
                 HHHHH.........HHHTT-HHHHHHHHHHHHHHHGGGT-S-S-HHH CS
      DALR_2  24 keiNr.........alkeedkaaasalkallrelaevLGllqeepea 61 
                 k +N          +lk++++a+ + +++++re +e  Gl++ee e+
  EPX70826.1 552 KSVNDshayeqalnDLKRDTEAEINHFDKTIRENEESIGLFKEEVEK 598
                 555555555444445888899999999****************9997 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.24
                 HHHHHHHHHHHTT-HHHHHHHHHH CS
      DALR_2  21 elakeiNralkeedkaaasalkal 44 
                 el  eiNr lk++++++ +a ++l
  EPX70826.1 699 ELTTEINR-LKHSQEDESKAIHTL 721
                 8999****.444444444433322 PP

>> DUF948  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   1.0     0.044        87      25      58 ..     526     559 ..     494     573 .. 0.69
   2 ?   11.5   0.3   0.00014      0.28      28      86 ..     575     633 ..     566     646 .. 0.70
   3 ?    1.3   6.9      0.21   4.2e+02      29      87 ..     691     749 ..     635     751 .. 0.85
   4 ?   -0.5   0.2      0.75   1.5e+03      34      58 ..     786     810 ..     773     848 .. 0.53
   5 ?   -0.4   0.0       0.7   1.4e+03      37      75 ..     932     970 ..     921     983 .. 0.60

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.044
      DUF948  25 kktldeaaatieelekqvdpilkevedllakvne 58 
                 k+ +d++++ +eel+++++    e+++ ++ + +
  EPX70826.1 526 KDDVDQLQQYVEELTQDLHTAKSELTKSVNDSHA 559
                 4556667777777777777777776666665554 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 0.00014
      DUF948  28 ldeaaatieelekqvdpilkevedllakvnelledvneklekvdplteavadlgesvse 86 
                 ++++ +ti+e e+ ++   +eve+l+++  +l +  +ek++++++  ++va+l +++++
  EPX70826.1 575 INHFDKTIRENEESIGLFKEEVEKLTDELSNLSKSYHEKSDRLKESESKVAELCQKLED 633
                 56667777777777777777777777777777777777777777777777777666554 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.21
      DUF948  29 deaaatieelekqvdpilkevedllakvnelledvneklekvdplteavadlgesvsel 87 
                 +e+++++eel+ +++ + +  ed  + + +l  +++ek  ++ ++ ++ a++ +++++l
  EPX70826.1 691 SELQKRVEELTTEINRLKHSQEDESKAIHTLSTQLEEKKRELSTVAQEKATVLKNLEAL 749
                 46677777777777777777777777777799999999999999999999999998877 PP

  == domain 4  score: -0.5 bits;  conditional E-value: 0.75
      DUF948  34 tieelekqvdpilkevedllakvne 58 
                 ++++l+++ + +  e+e+ +++ n+
  EPX70826.1 786 QVQKLKDEGNRLNSEMEKSTRQFNR 810
                 3333333333333333333333333 PP

  == domain 5  score: -0.4 bits;  conditional E-value: 0.7
      DUF948  37 elekqvdpilkevedllakvnelledvneklekvdplte 75 
                 ++  q++++ k v++  +k +++  d + ++ k+d+  e
  EPX70826.1 932 VMHGQLKELEKFVQGFKRKCKTMERDFKVEIGKLDTSLE 970
                 445555555555555555566666666666666665544 PP

>> DUF1192  Protein of unknown function (DUF1192)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0      0.17   3.5e+02      22      48 ..     529     555 ..     528     561 .. 0.86
   2 ?    0.3   0.1      0.37   7.4e+02      26      44 ..     586     604 ..     572     611 .. 0.83
   3 ?    0.8   0.1      0.26   5.3e+02      25      42 ..     665     682 ..     663     691 .. 0.84
   4 ?   11.5   0.8   0.00012      0.23      23      43 ..     691     711 ..     686     717 .. 0.87
   5 ?   -2.0   0.1         2     4e+03      25      46 ..     783     804 ..     774     807 .. 0.79
   6 ?   -2.9   0.1       3.8   7.5e+03       5      23 ..     840     856 ..     837     857 .. 0.70
   7 ?   -4.0   0.0       7.9   1.6e+04      33      49 ..     959     975 ..     957     978 .. 0.79

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.17
     DUF1192  22 veELeerIalLeaEIaRleaaiakkka 48 
                 v+ L++++++L++    ++ +++k  +
  EPX70826.1 529 VDQLQQYVEELTQDLHTAKSELTKSVN 555
                 899**********99999999998766 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.37
     DUF1192  26 eerIalLeaEIaRleaaia 44 
                 ee I l+++E+++l ++++
  EPX70826.1 586 EESIGLFKEEVEKLTDELS 604
                 7889999999999999886 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.26
     DUF1192  25 LeerIalLeaEIaRleaa 42 
                 L+e I+ +  EI+ l+++
  EPX70826.1 665 LKEKIESMYTEIESLKNH 682
                 89***********99876 PP

  == domain 4  score: 11.5 bits;  conditional E-value: 0.00012
     DUF1192  23 eELeerIalLeaEIaRleaai 43 
                 +EL++r+++L+ EI Rl+   
  EPX70826.1 691 SELQKRVEELTTEINRLKHSQ 711
                 6****************9765 PP

  == domain 5  score: -2.0 bits;  conditional E-value: 2
     DUF1192  25 LeerIalLeaEIaRleaaiakk 46 
                 L   +++L++E  Rl  +++k 
  EPX70826.1 783 LVRQVQKLKDEGNRLNSEMEKS 804
                 6667899********9999886 PP

  == domain 6  score: -2.9 bits;  conditional E-value: 3.8
     DUF1192   5 prkkptheigqDLslLSve 23 
                  r+k+   ++ +L++LS++
  EPX70826.1 840 RRSKK--VMQSELDALSLQ 856
                 44455..78999****975 PP

  == domain 7  score: -4.0 bits;  conditional E-value: 7.9
     DUF1192  33 eaEIaRleaaiakkkas 49 
                 + EI +l++ +++++++
  EPX70826.1 959 KVEIGKLDTSLEARSKK 975
                 67999999999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1103 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2925  (0.163144); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                       184  (0.0102627); expected 17.9 (0.001)
Passed Fwd filter:                        99  (0.00552178); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 2.96u 0.36s 00:00:03.32 Elapsed: 00:00:00.73
# Mc/sec: 4557.21
//
Query:       EPX70827.1  [L=671]
Description: AGC/NDR protein kinase Mug27 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.7e-60  203.5   0.0    1.1e-59  202.0   0.0    1.8  1  Pkinase      Protein kinase domain
    1.1e-28  100.3   0.5    2.2e-20   73.1   0.0    2.3  2  Pkinase_Tyr  Protein tyrosine kinase
    1.6e-05   25.5   0.2    4.2e-05   24.2   0.2    1.8  1  Pkinase_C    Protein kinase C terminal domain
  ------ inclusion threshold ------
       0.12   12.3   0.6          2    8.3   0.1    2.2  2  APH          Phosphotransferase enzyme family
       0.64    9.0   9.1      0.086   11.8   0.8    2.1  2  Perilipin    Perilipin family
          5    7.0  10.0        8.1    6.4   6.3    2.7  3  Ferlin_C     Ferlin C-terminus


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  202.0   0.0   3.7e-63   1.1e-59       3     264 .]     202     503 ..     200     503 .. 0.91

  Alignments for each domain:
  == domain 1  score: 202.0 bits;  conditional E-value: 3.7e-63
                 EEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHHH CS
     Pkinase   3 kleklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseeea 100
                  l klG+G++G+V  a++k+t++ vA+K++kk   +++ e +++l+E  +l +++++ +++l+++f++++ +yl +eyv+gg++ ++l  +g l e+++
  EPX70827.1 202 LLVKLGQGGYGSVWLAKKKDTHEFVALKMMKKAVLQQMGEvRHILTERDVLTNTNSEWLIKLFYAFQDQSFVYLAMEYVPGGDFRTYLAMHGLLRERQT 300
                 5679*****************************99999999********************************************************** PP

                 HHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS......................................BCTTTSCG CS
     Pkinase 101 kkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk......................................ltsfvgts 161
                 ++++++++ +++ +H+ g  HrDlKpeN+Lid++g+lK++DFGl++ + +s +                                      ++s+vg++
  EPX70827.1 301 RFYLAEMFMAVNEVHKLGYTHRDLKPENFLIDRNGHLKLGDFGLSTGIVNSAQirklrknlasaeapqsgyltqkqrrniyraflerngyrANSIVGSP 399
                 **************************************************999********************************************** PP

                 GGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCT...SHH...HHHTTS....-HHHHHHHHHHT-SSGCCST CS
     Pkinase 162 eYlAPEvlkeneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilg...etkeklpeasei....seeakdllkkllkkdpkkRl 253
                 eY+APEv+ + +y+k+vD+WslG+ilye   g ppfsg++++e ++++   l    ++l+   ++k++  e+       s++a +++ ++l + +++  
  EPX70827.1 400 EYMAPEVIYGDGYDKTVDYWSLGCILYECAVGYPPFSGTTTQE-TWTN---LYFWKDVLQrpeKNKNDEYEQ--SavciSDDAWSFILRCLGEPEMRFQ 492
                 *************************************666655.4444...444556666432222222222..13467************99888888 PP

                 THHHHHTSGGG CS
     Pkinase 254 taeellqhpyl 264
                 ++ e+ +hpy+
  EPX70827.1 493 SMGEIQKHPYF 503
                 9*********8 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.1   0.0   7.3e-24   2.2e-20       4     161 ..     203     356 ..     200     367 .. 0.91
   2 !   25.3   0.1   2.7e-09     8e-06     165     243 ..     395     473 ..     380     478 .. 0.82

  Alignments for each domain:
  == domain 1  score: 73.1 bits;  conditional E-value: 7.3e-24
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHH..HHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTT CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkeeateee..keelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekek 99 
                    klG+G +G+V+ ++ k    ++++ Va+K++k+   ++    +++l+e +++++++ + ++kl  +  +++ +++ +eyv+gGd++++L  +    
   EPX70827.1 203 LVKLGQGGYGSVWLAKKK----DTHEFVALKMMKKAVLQQMgeVRHILTERDVLTNTNSEWLIKLFYAFQDQSFVYLAMEYVPGGDFRTYLAMH--GL 294
                  568************999....89999******9987766444899***********************************************9..89 PP

                  SBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEE CS
  Pkinase_Tyr 100 ltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvk 161
                  l+ +++  + +++  +++ +++  + Hrdl   N L+++n + k++DfGL+  i ++ + +k
   EPX70827.1 295 LRERQTRFYLAEMFMAVNEVHKLGYTHRDLKPENFLIDRNGHLKLGDFGLSTGIVNSAQIRK 356
                  9999999999******************************************9977766654 PP

  == domain 2  score: 25.3 bits;  conditional E-value: 2.7e-09
                  STSGGGGS-HHHHHHSEEEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHH.HTTEES-BBTTSBHHHHHHHHHHT- CS
  Pkinase_Tyr 165 aklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglkneevlekl.kegkrlekpekcpeelyelmkkcwe 243
                     + ++mapE++    + +  D Ws G +l+E +  g  p++g +++e+ ++l   +  l++pek +++ ye    c +
   EPX70827.1 395 IVGSPEYMAPEVIYGDGYDKTVDYWSLGCILYECAV-GYPPFSGTTTQETWTNLyFWKDVLQRPEKNKNDEYEQSAVCIS 473
                  555679***************************887.********77777766647888899999999888887777765 PP

>> Pkinase_C  Protein kinase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.2   1.4e-08   4.2e-05       2      46 .]     524     575 ..     523     575 .. 0.87

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 1.4e-08
   Pkinase_C   2 esdeDtsNFDpeFTeedprdtppddm........pagspltssvqenFrGFtY 46 
                 ++++Dts+FD +F +e +++++ d +         +  + +  +q +F+GFtY
  EPX70827.1 524 SDPLDTSHFD-DFSNEAVMEAYRDVYdkkrimeeKMYKRHEVVNQRPFQGFTY 575
                 6799******.**************98888777777777777777*******9 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0     0.037   1.1e+02      64      94 ..     267     303 ..     209     320 .. 0.74
   2 ?    8.3   0.1   0.00067         2     167     187 ..     318     337 ..     306     346 .. 0.85

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.037
                 EEETTEEEEEEE----EE-SS......HHHHHHHHHH CS
         APH  64 deeigllfalieyvpgrsllr......klsaaqlpel 94 
                  +++ ++++++eyvpg ++++       l ++q++ +
  EPX70827.1 267 FQDQSFVYLAMEYVPGGDFRTylamhgLLRERQTRFY 303
                 4667789************998855444444444444 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00067
                 EEE-SS-SGGGEEEC..TTEE CS
         APH 167 vllHgDlhpgNllvdpddgrv 187
                 + +H+Dl+p N+l+d ++g++
  EPX70827.1 318 GYTHRDLKPENFLID-RNGHL 337
                 679************.88876 PP

>> Perilipin  Perilipin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.8   2.9e-05     0.086     194     287 ..      88     180 ..      75     244 .. 0.75
   2 ?    1.3   1.9     0.045   1.4e+02     272     314 ..     590     631 ..     542     639 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.9e-05
                 TT--HHHHHHHHHTT-EEEEGGGS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--...------------------------ CS
   Perilipin 194 egseeasveeqkkkpsyfvRLGsLSaklrerAyqhsleklrqakqraqealaqlsstldLielakkglsaanqklseaqekllqswlewkkkqq 287
                 +++++a  e+ k+ ++ +vRLG++  +l + +  + l++ + a++r    l+ l++ ++Li++ k   + +nq ++ + e+l+ s +++  k++
  EPX70827.1  88 HDKSNAPDEKRKAYSKRTVRLGTIRYQLLRPSQVEVLSRPEVARKRVACQLFFLNHYISLIDYYKLRKERFNQFVHFS-EELKASKQKKLWKEH 180
                 455667778888899999*******************************************************99984.444333333222222 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.045
                 -------------------------....SHHHHHHHHHHHHHHH CS
   Perilipin 272 qekllqswlewkkkqqeeseeeeeeee..eeqvEsrtLsllrslt 314
                 + + +  w+++kkk++ees     +++  +++v+ + L+ l + t
  EPX70827.1 590 EGEEEPEWKKKKKKKKEESS---RKKKmaKNRVDRNELAALSNST 631
                 22222345555555544444...3333448999999998776655 PP

>> Ferlin_C  Ferlin C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.3       3.8   1.1e+04      35      52 ..      50      67 ..      38      76 .. 0.54
   2 ?    0.8   0.0      0.14   4.1e+02      39      84 ..     458     502 ..     439     520 .. 0.67
   3 ?    6.4   6.3    0.0027       8.1      20      87 ..     585     650 ..     564     666 .. 0.60

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 3.8
    Ferlin_C 35 kkkKkkkkrsekkpedle 52
                 +kKk++ ++e++++ + 
  EPX70827.1 50 VRKKKREYQNEIQENPFS 67
                345555555555555444 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.14
    Ferlin_C  39 kkkkrsekkpedlefkdssgntflllgkveaelelltkeeAekepv 84 
                 +k+k+ e ++  +  +d + + f+l+   e e+++ +  e +k+p 
  EPX70827.1 458 EKNKNDEYEQSAVCISDDAWS-FILRCLGEPEMRFQSMGEIQKHPY 502
                 566666666777776666554.566655566666667777788875 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.0027
    Ferlin_C  20 lkeqediereereakkkkKkkkkrsekkpedlefkdssgntflllgkveaelelltkeeAekepvGkg 87 
                  k+qe+ e+e  e kkkkKkkk++s+ k++  + + +  n +  l++    + l  + +Aek+  G +
  EPX70827.1 585 AKQQEEGEEEP-EWKKKKKKKKEESSRKKKMAK-NRVDRNELAALSNSTDTTPLYHELKAEKKRHGGK 650
                 46677755544.445544444444444444433.4555555555555555667777777777665433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (671 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2047  (0.114173); expected 358.6 (0.02)
Passed bias filter:                      583  (0.0325172); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.71u 0.29s 00:00:01.00 Elapsed: 00:00:00.46
# Mc/sec: 4396.79
//
Query:       EPX70828.1  [L=99]
Description: DASH complex subunit Dad5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-16   60.8   8.4    1.8e-16   60.2   8.4    1.2  1  DASH_Hsk3        DASH complex subunit Hsk3 like
  ------ inclusion threshold ------
      0.012   15.6   0.1      0.014   15.4   0.1    1.0  1  Methyltransf_17  S-adenosyl-L-methionine methyltransferase
      0.081   13.3   0.6       0.14   12.6   0.6    1.3  1  LPP              Lipoprotein leucine-zipper
      0.083   12.7   0.3       0.15   11.8   0.3    1.4  1  DASH_Dam1        DASH complex subunit Dam1
       0.09   13.4   0.0       0.14   12.8   0.0    1.4  1  Mannosidase_ig   Mannosidase Ig/CBM-like domain


Domain annotation for each model (and alignments):
>> DASH_Hsk3  DASH complex subunit Hsk3 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.2   8.4     5e-20   1.8e-16       3      45 .]      37      79 ..      36      79 .. 0.98

  Alignments for each domain:
  == domain 1  score: 60.2 bits;  conditional E-value: 5e-20
   DASH_Hsk3  3 qyshLasqLaqLqaNLadteellevtseQaesirkLGklhasl 45
                q++hLa qL+qLqaNL+++e++l+vt++Qae+ir+ G+l+asl
  EPX70828.1 37 QMNHLADQLSQLQANLSHLENHLHVTAIQAEAIRRMGALQASL 79
                9*****************************************6 PP

>> Methyltransf_17  S-adenosyl-L-methionine methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   0.1   3.9e-06     0.014      62     139 ..      20      95 ..      18      99 .] 0.90

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 3.9e-06
                      --S-GGG---GGGEEES-HHHHHHHHHHH-S-EEEEEE----S-HHHHHHHHHHHHHHHGGGEEEEEEEEESS----S CS
  Methyltransf_17  62 laahpssvPeeedlllGeieetlealakigakaalvhaDlGtgykekdavtatrlsdliagllapgGlavsgqpldhe 139
                      +++h++  P  +++   ++++ +++l     +a l h +   +++  +a+  +r+  l a+ll+  G ++s+ ++++ 
       EPX70828.1  20 VNSHNNFAPSPNQVKAVQMNHLADQL--SQLQANLSHLENHLHVTAIQAEAIRRMGALQASLLMASGRVLSESNMTFF 95 
                      68999999999999999999999995..56788999**************************************9975 PP

>> LPP  Lipoprotein leucine-zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.6   3.9e-05      0.14       1      32 [.      37      68 ..      35      71 .. 0.62

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 3.9e-05
         LPP  1 kldeLssqVsqLkskvdqlssdvnsakaaaqa 32
                +++ L++q+sqL+++ + l++ +  ++ +a+a
  EPX70828.1 37 QMNHLADQLSQLQANLSHLENHLHVTAIQAEA 68
                56777777777777777777775555444444 PP

>> DASH_Dam1  DASH complex subunit Dam1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.3   4.3e-05      0.15       4      24 ..      37      57 ..      35      63 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 4.3e-05
   DASH_Dam1  4 afaeLaDsletLdknledLqq 24
                +++ LaD+l++L++nl++L++
  EPX70828.1 37 QMNHLADQLSQLQANLSHLEN 57
                7999***************75 PP

>> Mannosidase_ig  Mannosidase Ig/CBM-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   3.9e-05      0.14      22      90 ..       9      94 ..       2      99 .] 0.84

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3.9e-05
  Mannosidase_ig 22 rlidltgkllaetsttpvtvgansstevaeidvdellaat.................ggadpravvlvarledatgevlatnvywp 90
                    ++ ++tg++ +++s+ ++  ++n+ + v   ++++ l++                   +a +r + l a+l+ a+g+vl++   ++
      EPX70828.1  9 TVTNTTGNVPFVNSHNNFAPSPNQVKAVQMNHLADQLSQLqanlshlenhlhvtaiqAEAIRRMGALQASLLMASGRVLSESNMTF 94
                    5678899999999999999999999999999987777777778888888888888888899*******************876654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1194  (0.066596); expected 358.6 (0.02)
Passed bias filter:                      681  (0.0379832); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.44
# Mc/sec: 670.67
//
Query:       EPX70829.1  [L=848]
Description: transcription factor Gaf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      7e-16   57.6   2.2    1.6e-15   56.4   2.2    1.6  1  GATA      GATA zinc finger
    4.2e-11   42.5   1.8    8.2e-11   41.6   1.8    1.5  1  DUF1752   Fungal protein of unknown function (DUF1752)


Domain annotation for each model (and alignments):
>> GATA  GATA zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.4   2.2   1.7e-19   1.6e-15       1      35 [.     623     656 ..     623     657 .. 0.96

  Alignments for each domain:
  == domain 1  score: 56.4 bits;  conditional E-value: 1.7e-19
        GATA   1 CsnCgttkTplWRrgpdgnksLCnaCGlyykkkgl 35 
                 C+nC+t +TplWRr pdg++ LCnaCGl++k +g+
  EPX70829.1 623 CTNCQTHTTPLWRRSPDGQP-LCNACGLFMKINGV 656
                 ********************.**********9886 PP

>> DUF1752  Fungal protein of unknown function (DUF1752)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.6   1.8   9.1e-15   8.2e-11       1      27 [.      42      68 ..      42      69 .. 0.97

  Alignments for each domain:
  == domain 1  score: 41.6 bits;  conditional E-value: 9.1e-15
     DUF1752  1 lWkyytkkkkdlpngeRLENlSWRlWn 27
                lWk+++k+k+d+ ng+R ENlSWRl++
  EPX70829.1 42 LWKMMSKAKSDIQNGRRVENLSWRLMS 68
                8************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (848 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       714  (0.0398237); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.25s 00:00:00.91 Elapsed: 00:00:00.42
# Mc/sec: 6016.96
//
Query:       EPX70830.1  [L=579]
Description: oxidoreductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.7e-24   85.1   0.0    5.6e-24   84.5   0.0    1.2  1  ApbA      Ketopantoate reductase PanE/ApbA
    1.8e-19   70.2   0.0      3e-19   69.5   0.0    1.4  1  ApbA_C    Ketopantoate reductase PanE/ApbA C terminal


Domain annotation for each model (and alignments):
>> ApbA  Ketopantoate reductase PanE/ApbA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.5   0.0   6.3e-28   5.6e-24       2     144 ..      12     160 ..      11     167 .. 0.95

  Alignments for each domain:
  == domain 1  score: 84.5 bits;  conditional E-value: 6.3e-28
                 EEES-SHHHHHHHHHHHH.HTHCEEEE-SCHHHHHHHHHCEEEEETT.CEEEEEECEEECCH..SCCCCS-ESEEEE-SSGGGHHHHHHH.HGGGECTC CS
        ApbA   2 ailGaGaiGsllaakLak.agadvtlilrsrrlealkknGlrltseg.geeilrppealsae..ekselepidlvivtvKayqteealee.ikplldpn 95 
                 + +G++ai+ +++++L++ ++++  li+r+r  e++ ++G+r++s+  g+++++p++++++      ++ep+d+v+v++K ++ ++ l + ik++++p 
  EPX70830.1  12 LSVGSNAISAFMGWRLSEsQACHTSLIWRNR-SESVMSEGIRIRSSVfGSTKWKPDVVVPTIeqLVTNDEPFDYVFVCLKILPSVYDLGTaIKDVVTPG 109
                 679****************************.*****************************99878899********************99*******9 PP

                 EEEEEESSS...SCHHHHHTTTSTTSEEEEEEEE-EEEEEETTEEEECS--E CS
        ApbA  96 tvvlllqNG...lgheeelrealpkprvlggvtthgatregpgevhhagkge 144
                  ++++++N+   +g+e+ l+e +p++ +++ v+  +++++gp +++h++ ++
  EPX70830.1 110 -HTCVVLNTtgiVGAEKSLQETFPNNSIISFVIQDQFVQRGPLQFEHTAFAA 160
                 .999999998999**********************************98544 PP

>> ApbA_C  Ketopantoate reductase PanE/ApbA C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.5   0.0   3.3e-23     3e-19       2     124 ..     207     332 ..     206     333 .. 0.92

  Alignments for each domain:
  == domain 1  score: 69.5 bits;  conditional E-value: 3.3e-23
      ApbA_C   2 irlarweKllinaainpltalldckn.gellespelralvrallkEalavaeaegvelseerleeaveavlek...taanrsSMlqDveagrktEidyi 96 
                 i++++we  +  +a+ p++ l + +n   +++++ + ++++ +++Ea+ +a  +g+ ++ +  +e +++++++   +a++ s + qD++a+r++E++++
  EPX70830.1 207 IQQKQWETGIGHMAFFPISILNEEPNlSLIYRAKPFVKIINGIMNEAFSIAVMQGCDFPID-KQESLKRFIANrmlAAPRPSYIFQDYLAHRPLEVEVL 304
                 89************************77777**************************9999.777888887776656667999**************** PP

      ApbA_C  97 nGavvklAeklgvetPvnellyellkal 124
                 +G++v+lA++++v +P++e++y+l  a+
  EPX70830.1 305 LGYPVELANRYKVLVPYMETIYALFEAK 332
                 ***********************98775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (579 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       340  (0.0189637); expected 358.6 (0.02)
Passed bias filter:                      266  (0.0148363); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.29s 00:00:00.84 Elapsed: 00:00:00.47
# Mc/sec: 3689.68
//
Query:       EPX70831.1  [L=658]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.7e-70  237.1   4.5    2.8e-54  184.4   0.1    3.0  3  DUF3818    Domain of unknown function in PX-proteins (DUF3818
    1.8e-19   70.0   0.0    3.8e-19   69.0   0.0    1.5  1  PXB        PX-associated
  ------ inclusion threshold ------
        0.1   12.3   1.3       0.15   11.8   0.0    1.9  2  DUF2326    Uncharacterised protein conserved in bacteria (DUF
       0.24   11.6   2.1        1.1    9.5   0.4    2.6  2  UCR_hinge  Ubiquinol-cytochrome C reductase hinge protein


Domain annotation for each model (and alignments):
>> DUF3818  Domain of unknown function in PX-proteins (DUF3818)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  184.4   0.1   6.3e-58   2.8e-54       1     237 [.     210     475 ..     210     478 .. 0.87
   2 !   51.8   0.1   1.4e-17   6.1e-14     269     336 ..     478     535 ..     472     538 .. 0.91
   3 ?    1.9   0.2      0.02        92     167     216 ..     552     601 ..     545     607 .. 0.81

  Alignments for each domain:
  == domain 1  score: 184.4 bits;  conditional E-value: 6.3e-58
     DUF3818   1 gLsklfeeikekesieelspelkkliewarielAstlyqvFvgsd..........nsselfaqlkrlhklmPYfllkqiLritNpmaimkglldLfLaq 89 
                 gL++ ++ ++e+e+i++++++lk+l+e++r+++As+l++vFv  d          n+++  + ++r+++ +P+fl++q+Lr++N++++m+gl++LfL++
  EPX70831.1 210 GLDEFIRLLGESEDISTWDEPLKSLAENVRYTIASLLHFVFVIVDripqsphlenNGKGPEGIVERIYNRVPWFLTRQVLRVGNAGLLMSGLTRLFLMK 308
                 799999***************************************99999999989******************************************* PP

     DUF3818  90 Pfgg....rsLlqrifstilnedlkelekeikelekkidk...seelieklkkfveaseeeqeeireeseeekldllvvilrseel.pklske...... 174
                 P+++    r+Llq+++s+i+n+dl+++++ +ke+++k+d+   + +++e+++++ + ++ +q+e+r++s ++kl+++v++l++++  +kl+++      
  EPX70831.1 309 PLSWfaesRNLLQTMLSGIFNADLEHTDNLLKEIDTKFDDdpeWTQMREAIQWYAQLPRIRQDEVRDQSIQKKLNITVAVLKEHQNeKKLKTDvtgsae 407
                 ***99999*************************************************************************988887788877666544 PP

     DUF3818 175 ...qleeviesykaykeakkeeksasekeenedae......lfedlkellklylrerDkellikll.qepels 237
                    + e+ ++s++ y+ + +++ ++++ +             ++ ++++l+++l++rD+e+li+ l + ++l+
  EPX70831.1 408 ekvTSESNVDSSEVYTVSLSSDGEKDSRK-----FdpfsdvGVQTAMKYLDAVLTHRDRECLIHDLcEGDQLT 475
                 44444444555555544444444444444.....2555555589*******************9995656666 PP

  == domain 2  score: 51.8 bits;  conditional E-value: 1.4e-17
     DUF3818 269 kFlndliklveklkneeqesdpanvvqafidLvdrhedsfykFvhevyvkdeelfdelikWiekilkf 336
                 +F+ dli+l+++ +  +          +f++Lv++++++f++Fvh+++v++++l+ ++++W++++l+ 
  EPX70831.1 478 CFMYDLIQLSKAASPLS----------SFVELVEKYQSCFLRFVHRLVVNAPDLCAQWCVWYRHCLDE 535
                 8**********666666..........**************************************985 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.02
     DUF3818 167 elpklskeqleeviesykaykeakkeeksasekeenedaelfedlkellk 216
                  l+ l++++ ++v  + +ay++  k++++ s ++++  +e++ +l +l+ 
  EPX70831.1 552 ALNSLDDDTKQKVLHEIQAYSNDLKKQQEVSIEKNECTSEWYFHLAKLFG 601
                 447889999999999999**999999999988888888888899988875 PP

>> PXB  PX-associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.0   0.0   8.4e-23   3.8e-19      13     128 ..       4     124 ..       2     126 .. 0.90

  Alignments for each domain:
  == domain 1  score: 69.0 bits;  conditional E-value: 8.4e-23
         PXB  13 LkkiLihlelykElealk.........dpdalsklGyPFkseekekkekkeaesselPllrfllrefvlt..fPflkalpkefWqdkvqpfleslaean 100
                 L  iL+ lel++E++ lk            +l k+G+PFk +e+        + + +P++ f++++ + t  +P+++++p efW+ ++qp+le++ + n
  EPX70831.1   4 LTSILLLLELQHEFSGLKipgkskwfcIRGRLAKFGPPFKLKEEF------LDADVSPVMTFIVQNCIFTptLPGVNKAPDEFWSGQLQPLLEKIGKHN 96 
                 7789*****************9999998999*********85522......445689*********998666*************************** PP

         PXB 101 lSesydkgeltkrkklatklskllellv 128
                 lS+syd+g ++krk++  ++  ++ +l+
  EPX70831.1  97 LSDSYDHGRVSKRKMIGFAVIVVMHVLA 124
                 *****************99999888876 PP

>> DUF2326  Uncharacterised protein conserved in bacteria (DUF2326)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.2       0.9     4e+03     112     129 ..     406     428 ..     375     437 .. 0.60
   2 ?   11.8   0.0   3.4e-05      0.15      65     105 ..     550     589 ..     535     617 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.9
     DUF2326 112 s....klekdveknev.klsltD 129
                      + e++v+++ev ++sl+ 
  EPX70831.1 406 AeekvTSESNVDSSEVyTVSLSS 428
                 12234456667777666666554 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 3.4e-05
     DUF2326  65 HDslfegvderqlaklleliaevaeklgiQyivtlnkdklp 105
                 +D  ++++d+++++k+l+ i+ ++++l++Q  v++ k++  
  EPX70831.1 550 QD-ALNSLDDDTKQKVLHEIQAYSNDLKKQQEVSIEKNECT 589
                 78.89********************************9982 PP

>> UCR_hinge  Ubiquinol-cytochrome C reductase hinge protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.4   0.00025       1.1      17      56 ..     497     536 ..     484     540 .. 0.90
   2 ?    0.3   0.1      0.19   8.4e+02      30      51 ..     575     598 ..     558     603 .. 0.69

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00025
   UCR_hinge  17 kklkkhyeeCveRVksrseaeteedCveelfdlvhcvdhC 56 
                  +l+++y+ C  R  +r  ++ +  C +  + + hc+d+C
  EPX70831.1 497 VELVEKYQSCFLRFVHRLVVNAPDLCAQWCVWYRHCLDEC 536
                 6789************999999****************** PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.19
   UCR_hinge  30 Vksrse.aeteedCv.eelfdlvh 51 
                 +k+++e + ++ +C+ e +f+l++
  EPX70831.1 575 LKKQQEvSIEKNECTsEWYFHLAK 598
                 455666656788998356899976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (658 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1223  (0.0682135); expected 358.6 (0.02)
Passed bias filter:                      636  (0.0354733); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.68u 0.29s 00:00:00.97 Elapsed: 00:00:00.46
# Mc/sec: 4304.72
//
Query:       EPX70832.1  [L=694]
Description: Trp-like ion channel [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.1e-59  200.1  28.3    8.8e-59  199.3  28.3    1.3  1  TRP              Transient receptor potential (TRP) ion chann
      3e-36  124.8   0.5    1.2e-35  122.9   0.1    2.1  2  TRP_N            ML-like domain
  ------ inclusion threshold ------
       0.15   12.0   0.9       0.87    9.6   0.9    2.3  1  Phage_holin_2_1  Bacteriophage P21 holin S


Domain annotation for each model (and alignments):
>> TRP  Transient receptor potential (TRP) ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  199.3  28.3   1.5e-62   8.8e-59      34     417 ..     217     593 ..     182     603 .. 0.86

  Alignments for each domain:
  == domain 1  score: 199.3 bits;  conditional E-value: 1.5e-62
         TRP  34 vaas...vlslflyfQsvafigmlsvnyPpvlaawtqnfaWsmglirvsfmqkiinwyvqstgGtatlvlsssstssvsvkralkrgeskslpessskl 129
                 ++ s   ++ ++ +++ ++++++++v+ P++l +w +nfaW +gli+ +++ ++in++ + +gG       ++++ s+  +r ++    +  ++++s +
  EPX70832.1 217 ITNSmpsIQYIVDFLHCIVLTSAVGVEQPKILVSWSSNFAWIIGLIPDKKLKNSINSFLKHSGG-------DRNSRSIDIQRRTT----TAFKSEDSII 304
                 33334448889999**************************************************.......45566677766542....2344455666 PP

         TRP 130 .v.rGikrvaekagiestnafmtgllffliliallvvlvllfKlllellarkklikedrlk.efrknwlgilkgallrlilifffqllvlclfeftqrd 225
                  +  G+ ++a+k++i+s ++f  +l++f+i i+++  +++ f ++  l+++  + +  + + +  + w+++l+ al ++++++ ++l+++++f+ft rd
  EPX70832.1 305 gTySGLVGLANKLHIPSNDLFTLSLIWFVISIGIIGGIMFGFLCINTLFQKLYFKHLPSCNnNAVECWKRLLCNALMKWVFLCLPILIMFSCFQFTLRD 403
                 6656*********************************999999999999988655534443377889******************************** PP

         TRP 226 saavvvlAvillalflgvllffafrvlitarkskrlhknpaylLysdkkvlnkyGflyeqyrasrywffvpllvylfvkalfialaqgsGkvQvialli 324
                 + ++v+lA+illal++g+ ++ ++    t+r+ +   kn +     d++vl   +++y + ++++++ff++ + ++++ +lf al+q++Gk+Q+i+l+i
  EPX70832.1 404 AYGPVILAAILLALLVGIFAWCFISLAKTIRNNQYVNKNSKEESLPDQNVLPWLSWMYMSLKERYWYFFLIRFTVVLLSGLFFALLQNHGKAQAIVLFI 502
                 ********************************9998888888899****************************************************** PP

         TRP 325 iEllylvlliwlrPyedkrtnvlniiisvvkvlnvilllaFseefglseivktvvGvvlivinavlalvlliliivnaiiallsknpdrryrp 417
                 +E+l+++ li +rPy +  + + + ++s+v++l+++ll+++   f+ + i k v+G+v+i+++++   +l+i  ++n+++ l      ++y+p
  EPX70832.1 503 FEVLATASLIGFRPYFGLYSMMCALLVSIVRLLSMALLIPMA--FNSNIIFKVVIGIVIIIVQGLAFSALTIWGFLNFLSLLGTLCSATKYQP 593
                 ****************************************85..9****************************99999999888888788887 PP

>> TRP_N  ML-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.9   0.1     2e-39   1.2e-35       1     139 []      33     178 ..      33     178 .. 0.96
   2 ?   -1.0   0.0      0.36   2.2e+03      62     110 ..     635     676 ..     621     680 .. 0.65

  Alignments for each domain:
  == domain 1  score: 122.9 bits;  conditional E-value: 2e-39
       TRP_N   1 lvtssfenClensqftaskfdvtftpdnktvvfnvtgtssienkavtlelkveaygyevvnetvdpCdanvkglCPlgpgfkinasgvlkvseevvsei 99 
                 l+t ++++C+++s +++++fd+t++++n ++v +++g s+ + + vt+++ v+ayg ++ + t+dpCd+n++++CP+++   i+a+gvl++s ++v+++
  EPX70832.1  33 LYTAEYTSCMQDSLVSFDRFDATYYSRNLSIVLDIHGRSNLDAN-VTFDIVVDAYGSQRARFTFDPCDMNLGNVCPIKKDSIIEAQGVLPISYQDVKMV 130
                 6899****************************************.***********************************9****************** PP

       TRP_N 100 psiaYsipdldatvrvriys.....tg...eateiaCvsatitngktv 139
                 p++a++ipd+++ v++r+y+     ++   ea+++aC+sa+++ng+t+
  EPX70832.1 131 PNLAWTIPDFEGFVKFRMYRtedleNSsinEAQSLACISASLKNGHTF 178
                 ********************988872246699**************96 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.36
       TRP_N  62 etvdpCdanvkglCPlgpgfkinasgvlkvseevvseipsiaYsipdld 110
                 e+  pC  + ++ CP++   +++a  ++      +   p+ + s++d++
  EPX70832.1 635 EKEAPC-LHYENNCPITREESFTAIPMS------MHPSPKSSHSFSDFS 676
                 555666.457889999998655554222......233366666666665 PP

>> Phage_holin_2_1  Bacteriophage P21 holin S
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.9   0.00015      0.87      35      55 ..     336     359 ..     329     362 .. 0.87

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00015
  Phage_holin_2_1  35 igvlgglvigll...TyltnlYFK 55 
                      ig++gg+++g+l   T++  lYFK
       EPX70832.1 336 IGIIGGIMFGFLcinTLFQKLYFK 359
                      8*********876669999****9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (694 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       900  (0.050198); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.68u 0.30s 00:00:00.98 Elapsed: 00:00:00.46
# Mc/sec: 4549.35
//
Query:       EPX70833.1  [L=145]
Description: N-acetyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.9e-12   47.5   0.0    2.3e-12   47.2   0.0    1.1  1  Acetyltransf_1   Acetyltransferase (GNAT) family
    1.4e-06   28.3   0.0    1.8e-06   27.9   0.0    1.1  1  Acetyltransf_10  Acetyltransferase (GNAT) domain
    2.2e-06   28.0   0.1    2.9e-06   27.6   0.1    1.2  1  Acetyltransf_7   Acetyltransferase (GNAT) domain
     0.0015   18.3   0.0     0.0016   18.1   0.0    1.2  1  PanZ             Acetyltransferase (GNAT) domain, PanZ
     0.0035   17.5   0.0      0.006   16.7   0.0    1.5  1  Acetyltransf_CG  GCN5-related N-acetyl-transferase
  ------ inclusion threshold ------
      0.091   12.2   0.0      0.091   12.2   0.0    1.2  1  Acetyltransf_15  Putative acetyl-transferase
      0.098   12.8   0.0       0.15   12.2   0.0    1.2  1  Acetyltransf_6   Acetyltransferase (GNAT) domain


Domain annotation for each model (and alignments):
>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.2   0.0   8.9e-16   2.3e-12      34      99 ..      42     109 ..      10     122 .. 0.79

  Alignments for each domain:
  == domain 1  score: 47.2 bits;  conditional E-value: 8.9e-16
                     EEEE..EEETTEEEEEEEEEEEETTSTTEEEEEEEEESGGGTTSSHHHHHHHHHHHHHHHTTESEEEE CS
  Acetyltransf_1  34 gllv..aeedgeliGfisllkipdekggvayieslaVspeyrgkGlGsaLlealeerareegikkivl 99 
                     g l+  a++++  +G ++++k +++k ++  i sl V p+yr+ G+Gs+Lle+++  a+e g k++++
      EPX70833.1  42 GPLAqyAYFNNVCVGAVRCKKETHNKSNKLQILSLGVLPAYRKYGVGSQLLEHVINSAKEIGSKEVYV 109
                     333345899******************************************************99876 PP

>> Acetyltransf_10  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   0.0   6.8e-10   1.8e-06       8     113 ..      25     133 ..      15     144 .. 0.76

  Alignments for each domain:
  == domain 1  score: 27.9 bits;  conditional E-value: 6.8e-10
  Acetyltransf_10   8 egietfkefispealrerieegealllvaeeggkivGviel.rdgs......hisllfVdpeyrgqGigkaLleaveeeaekdgikl.eltvna 93 
                      e+i+ f    sp+ ++e ++ g    ++++ ++  vG+++  ++++      +i  l V p+yr+ G+g++Lle+v++ a++ g+k+  + +  
       EPX70833.1  25 EEIRSF----SPQYYKETLQIGPLAQYAYF-NNVCVGAVRCkKETHnksnklQILSLGVLPAYRKYGVGSQLLEHVINSAKEIGSKEvYVQLPL 113
                      555555....34556666666777667776.5599****99555558899999999************************99999977777777 PP

  Acetyltransf_10  94 spyavpfYeklGFkavgeeq 113
                      +   ++ +   GF+++++  
       EPX70833.1 114 ALDSKNWFLGRGFTELSDSG 133
                      77888888888888884443 PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   0.1   1.1e-09   2.9e-06      11      75 ..      51     127 ..      34     128 .. 0.66

  Alignments for each domain:
  == domain 1  score: 27.6 bits;  conditional E-value: 1.1e-09
                     TTEEEEEEEEEEES......TCTEEEEE-GGGTTSSHHHHHHHH......TTSEEEEE.EEEETHH...HHHHHHHHTTEE CS
  Acetyltransf_7  11 dgkivGfialslld......aeitrlaVdpeyrgkGiGraLlea......aekgiile.qlelnae...kaikfYeklGFe 75 
                     ++  vG ++++ +        +i  l V+p+yr+ G+G++Lle+      +  g   e +++l  +    + +++   GF+
      EPX70833.1  51 NNVCVGAVRCKKEThnksnkLQILSLGVLPAYRKYGVGSQLLEHvinsakE-IG-SKEvYVQL--PlalDSKNWFLGRGFT 127
                     455589888888777666545555599****************95443321.22.12222333..1223457788888887 PP

>> PanZ  Acetyltransferase (GNAT) domain, PanZ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   6.3e-07    0.0016      42      99 ..      47     108 ..       3     128 .. 0.80

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 6.3e-07
        PanZ  42 aarFNdRlLgAvkveledk....eaelsdlcVRevTRrRGVgsyLleearrqaPevkswvla 99 
                  a FN+   gAv+ + e +    + ++ +l V    R+ GVgs Lle++ ++a e+ s  + 
  EPX70833.1  47 YAYFNNVCVGAVRCKKETHnksnKLQILSLGVLPAYRKYGVGSQLLEHVINSAKEIGSKEVY 108
                 589**********988755333355677899******************9999888776665 PP

>> Acetyltransf_CG  GCN5-related N-acetyl-transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   2.3e-06     0.006      20      59 ..      66     105 ..      36     109 .. 0.86

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 2.3e-06
  Acetyltransf_CG  20 rkegvldfthTeVpeelrGkGiAkkLvkaalddareeglk 59 
                      +k+++l++    V +++r  G++++L +++++ a+e g k
       EPX70833.1  66 NKSNKLQILSLGVLPAYRKYGVGSQLLEHVINSAKEIGSK 105
                      4566999999*************************98876 PP

>> Acetyltransf_15  Putative acetyl-transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   3.6e-05     0.091      64     103 ..      54     101 ..       7     137 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 3.6e-05
  Acetyltransf_15  64 s........silieknvleiYtlyvsekyrgkGlakklLeeslkelkk 103
                                +  ++n l+i +l v + yr+ G+  +lLe+ +++ k 
       EPX70833.1  54 CvgavrckkETHNKSNKLQILSLGVLPAYRKYGVGSQLLEHVINSAKE 101
                      14444444467789999************************9998765 PP

>> Acetyltransf_6  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   5.9e-05      0.15      99     129 ..      75     105 ..      66     109 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 5.9e-05
  Acetyltransf_6  99 lggydpelaklspgllllweliedaaeeGlr 129
                       g+ p+++k+++g  ll ++i  a+e G +
      EPX70833.1  75 SLGVLPAYRKYGVGSQLLEHVINSAKEIGSK 105
                     56899*********************98855 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       417  (0.0232584); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.41u 0.27s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1038.68
//
Query:       EPX70834.1  [L=330]
Description: poly(A) polymerase Cid12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-12   47.9   0.1    2.5e-12   46.8   0.1    1.6  1  PAP_assoc  Cid1 family poly A polymerase
  ------ inclusion threshold ------
      0.035   13.7   0.0      0.068   12.8   0.0    1.4  1  zf-SCNM1   Zinc-finger of sodium channel modifier 1


Domain annotation for each model (and alignments):
>> PAP_assoc  Cid1 family poly A polymerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.8   0.1   2.8e-16   2.5e-12       2      62 .]     207     263 ..     206     263 .. 0.96

  Alignments for each domain:
  == domain 1  score: 46.8 bits;  conditional E-value: 2.8e-16
                 HHHHHHHHHHHHHHT--TTTEEEECSST-EEEHHHHCGCS-SSEECESSSSEBEETTCCCC CS
   PAP_assoc   2 LGeLLigFFeyYgreFdyenvvisirtggiltkkekgwesaeskernrfllaIeDPfeldn 62 
                 L +LL +FF+++g e++ye  v++  tg+i++k +kgw      e  ++ll+IeDP e +n
  EPX70834.1 207 LRSLLQDFFHFWGVEWSYELFVLRPLTGQIVPKLQKGWF----HEAVPNLLSIEDPLEKNN 263
                 679************************************....589************998 PP

>> zf-SCNM1  Zinc-finger of sodium channel modifier 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   7.6e-06     0.068       4      19 ..     148     163 ..     146     164 .. 0.96

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 7.6e-06
    zf-SCNM1   4 CshrPVfDTilmLsvH 19 
                 C ++PV  T+lmL+ H
  EPX70834.1 148 CKKNPVYGTLLMLLKH 163
                 **************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       577  (0.0321825); expected 358.6 (0.02)
Passed bias filter:                      511  (0.0285013); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 2270.15
//
Query:       EPX70835.1  [L=280]
Description: ww domain binding protein 11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-17   64.0  11.8    1.3e-17   64.0  11.8    2.9  2  Wbp11     WW domain binding protein 11
      1e-14   55.0   6.3      1e-14   55.0   6.3    2.8  2  NpwBP     mRNA biogenesis factor
  ------ inclusion threshold ------
      0.022   14.4   4.4       0.85    9.2   0.1    2.6  2  SipA      SipA N-terminal domain


Domain annotation for each model (and alignments):
>> Wbp11  WW domain binding protein 11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.0  11.8   2.2e-21   1.3e-17       1      78 []       4      81 ..       4      81 .. 0.98
   2 ?   -3.3   5.7         2   1.2e+04      13      41 ..     165     193 ..     164     234 .. 0.67

  Alignments for each domain:
  == domain 1  score: 64.0 bits;  conditional E-value: 2.2e-21
       Wbp11  1 gKslnPadaaRKaqrkkelkKnKkerqkareaklakkdpdeleeeiekLeelessgkldaadkkklekLekelkavkk 78
                ++ +nP++a  K+++k+e++K ++er+k+ e+kl++k++ +le++i++L +le s+ l+a+dk+ l++Lek+l+ ++k
  EPX70835.1  4 KRGYNPVQAETKKKKKREQNKLREERAKRYEEKLSHKNVGQLERQIAELSALEGSQGLNAHDKQILQNLEKDLAVIRK 81
                5889*********************************************************************99976 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 2
       Wbp11  13 aqrkkelkKnKkerqkareaklakkdpde 41 
                 +q+kk+ +K ++  +++ + kla   p++
  EPX70835.1 165 EQKKKDNRKPRNVARRRDDIKLAEVTPNS 193
                 68888888877766666666777655555 PP

>> NpwBP  mRNA biogenesis factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.0   6.3   1.7e-18     1e-14       1      49 []     115     157 ..     115     157 .. 0.87
   2 ?   -2.0   2.3       1.1   6.3e+03      18      29 ..     195     206 ..     160     263 .. 0.72

  Alignments for each domain:
  == domain 1  score: 55.0 bits;  conditional E-value: 1.7e-18
       NpwBP   1 PekSiYYdPvlNPlGkpPpgmPylektlkyeppseeesd.dpeiadiplP 49 
                 P+kSiYYdPv+NP+G+pPpgm y+ek+ +       +s+ d+++ dip+P
  EPX70835.1 115 PKKSIYYDPVFNPYGVPPPGMSYREKEEE-------SSEtDESVIDIPIP 157
                 99*************************44.......444477777***99 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 1.1
       NpwBP  18 PpgmPylektlk 29 
                 P++ P +e +++
  EPX70835.1 195 PSDAPGMEEKQE 206
                 333344444433 PP

>> SipA  SipA N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   1.1    0.0015       9.2      85     121 ..      51      87 ..      12      95 .. 0.78
   2 ?    9.2   0.1   0.00014      0.85      59     100 ..     203     245 ..     164     251 .. 0.80

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0015
                 SS-SSSTTS--SHHHHHHHHHHHHHHHHHHHH--HHH CS
        SipA  85 eksafGPWlaktkkaeqlrenlekkLaeiakrhtsGe 121
                 e sa       +   +q ++nlek La i k++  G 
  EPX70835.1  51 ELSALEGSQGLNAHDKQILQNLEKDLAVIRKKNIHGH 87 
                 55555555566777899****************9996 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00014
                 T-HHHHHHHHHHHHHHHHH.HHHH---SS-SSSTTS--SHHHH CS
        SipA  59 ldpeaeklLqkvaaqYaar.iikDgLkeksafGPWlaktkkae 100
                 ++ e+++  ++v+ +Y+a+ i++D  ke   f P + +++k +
  EPX70835.1 203 EKQETDTQEKDVVTEYSAQpIVRDLRKEATQFLPATVRNQKRK 245
                 4567778889*******9879999999************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1554  (0.0866752); expected 358.6 (0.02)
Passed bias filter:                      396  (0.0220871); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 1984.78
//
Query:       EPX70836.1  [L=496]
Description: tRNA methyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.3e-50  169.6   0.2    4.5e-50  168.7   0.2    1.5  1  AdoMet_MTase     Predicted AdoMet-dependent methyltransferase
     0.0002   21.4   0.0      0.042   13.8   0.0    2.5  2  Methyltransf_32  Methyltransferase domain
  ------ inclusion threshold ------
       0.02   14.5   0.0      0.042   13.5   0.0    1.5  1  Methyltransf_28  Putative S-adenosyl-L-methionine-dependent m


Domain annotation for each model (and alignments):
>> AdoMet_MTase  Predicted AdoMet-dependent methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  168.7   0.2   7.6e-54   4.5e-50       1     112 []     216     327 ..     216     327 .. 0.99

  Alignments for each domain:
  == domain 1  score: 168.7 bits;  conditional E-value: 7.6e-54
  AdoMet_MTase   1 lvnlekyndlykelkqkyakrlvenwvestdplkfvfedlaiaaylivlwkktrseeketsfvdvgcgngllvyvlaaegykgygidlrkrklwely 97 
                   +v+++k++d+y+elk+kyak+l+e wve+tdp+k+vfedl ia++li+lwk+ + +++ + fvd+gcgngllv++l++egy gyg+d+r rk+w++y
    EPX70836.1 216 VVERNKFQDTYVELKKKYAKQLIEGWVEKTDPKKHVFEDLGIATFLIELWKQMYPSKQSFNFVDIGCGNGLLVHILLSEGYLGYGFDARERKSWKIY 312
                   69*********************************************************************************************** PP

  AdoMet_MTase  98 paevkvdliekvvvp 112
                   p  v+++l ekv+vp
    EPX70836.1 313 PEFVQRNLSEKVLVP 327
                   *************98 PP

>> Methyltransf_32  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.0     7e-06     0.042      10      61 ..     258     305 ..     248     318 .. 0.83
   2 !    4.8   0.0    0.0042        25     124     156 ..     363     394 ..     351     396 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 7e-06
  Methyltransf_32  10 aelvakllkelakesgaltvvDvGaGkgYLsfvlalkekeyklkvvgidake 61 
                      a+++ +l k++  ++++++ vD+G+G+g L  +l +   e ++  +g+da+e
       EPX70836.1 258 ATFLIELWKQMYPSKQSFNFVDIGCGNGLLVHILLS---E-GYLGYGFDARE 305
                      56777788888999********************99...4.66667777776 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.0042
  Methyltransf_32 124 HaCdtltdtalrlalekeakllvlvpCCyhela 156
                      Ha d+lt+ +  la  ++    +++pCC h+l+
       EPX70836.1 363 HA-DELTPYIPILARLNKKSSFISIPCCVHDLT 394
                      55.666666555555566677889******997 PP

>> Methyltransf_28  Putative S-adenosyl-L-methionine-dependent methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0     7e-06     0.042       2      38 ..     257     293 ..     256     296 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 7e-06
  Methyltransf_28   2 laiwlleewqalgrpskklrliElGpGkGtLmadvLr 38 
                      +a +l+e w+++   +++++++++G G+G L++ +L+
       EPX70836.1 257 IATFLIELWKQMYPSKQSFNFVDIGCGNGLLVHILLS 293
                      7999********766688*************998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (496 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       567  (0.0316247); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.44
# Mc/sec: 3369.47
//
Query:       EPX70837.1  [L=118]
Description: ribosomal protein Mrp49 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.5e-06   27.3   0.0    3.9e-06   26.7   0.0    1.5  1  L51_S25_CI-B8  Mitochondrial ribosomal protein L51 / S25 / CI
  ------ inclusion threshold ------
      0.054   13.1   0.0      0.058   13.0   0.0    1.1  1  Abhydrolase_1  alpha/beta hydrolase fold


Domain annotation for each model (and alignments):
>> L51_S25_CI-B8  Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   0.0   4.4e-10   3.9e-06       1      25 [.      46      70 ..      46      99 .. 0.90

  Alignments for each domain:
  == domain 1  score: 26.7 bits;  conditional E-value: 4.4e-10
                   HHHHHTTTTHHHHTT-TTSEEEEEE CS
  L51_S25_CI-B8  1 aRkFwrknLprlkykNPavpivvrr 25
                   a+kF++++Lp+lky+N +++++v  
     EPX70837.1 46 AKKFVKEYLPSLKYHNEHIKFNVEH 70
                   79********************975 PP

>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   6.5e-06     0.058     164     239 ..      25     104 ..       4     116 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 6.5e-06
                    HCHHHCCHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHC......THHHHSEEEEEEETTCSSSCHHHHHHHHHCHTS CS
  Abhydrolase_1 164 pdkskrfpssgsdnasslatgalksieqwpttdsaklllrlre......lknvlaptlvisgtsDplvppkaledlaqllpk 239
                    p+ +   + ++s n++++ +ga+k+++++   +s k+ ++  +      l nv+apt+ +++++ pl++++++ +  + +++
     EPX70837.1  25 PKNVVEVRVQYSLNNKNGHMGAKKFVKEYL--PSLKYHNEHIKfnvehkLPNVKAPTFSVHTSEGPLFSYGMKLKHSETISN 104
                    666777778899999999999999998753..33333444444556999*********************999888777666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       434  (0.0242066); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.28s 00:00:00.71 Elapsed: 00:00:00.46
# Mc/sec: 777.46
//
Query:       EPX70838.1  [L=297]
Description: RNA polymerase II subunit 3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.5e-32  112.3   0.0    3.3e-32  111.2   0.0    1.6  1  RNA_pol_A_bac  RNA polymerase Rpb3/RpoA insert domain
    3.6e-19   68.0   0.0    4.6e-19   67.6   0.0    1.1  1  RNA_pol_L      RNA polymerase Rpb3/Rpb11 dimerisation domain


Domain annotation for each model (and alignments):
>> RNA_pol_A_bac  RNA polymerase Rpb3/RpoA insert domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.2   0.0   3.7e-36   3.3e-32       1     112 []      48     172 ..      48     172 .. 0.92

  Alignments for each domain:
  == domain 1  score: 111.2 bits;  conditional E-value: 3.7e-36
                    EEEEECTSSS.HHHHHCHHHCSTCBSSCHHH....HHHHHCTT-ETSSSSTTCSEEEEEEEEESSEC....EEGGGCBES.......SSSCEES.. CS
  RNA_pol_A_bac   1 VeieentsvlqDEvvaHrlgliplvsedvle....illnlkelveeeeegeeeksvelkLnvkgpge....vtagdlkle.......dadveiv.. 79 
                    Vei+ ntsv+ DE++aHrlg+ipl+s +++e     l++++++  ++++++ ++sve++Ln+k+ ge    v+a+dl+++       +     +  
     EPX70838.1  48 VEINVNTSVMPDEFLAHRLGMIPLNSTNIDEpppvGLEYTRNC--DCDQYCAKCSVEMNLNAKCLGEgtmeVYARDLVVSsnstlgqP-----Ila 136
                    8999***************************99999*******..9********************999*********9755444333.....266 PP

                    ...STTSEEEEEETT-EEEEEEEEEEESSEECTTT- CS
  RNA_pol_A_bac  80 ...npdilIakLrkgqeleleakvkkGiGkehakfs 112
                        ++ lI+kLrk+qe++l++++kkGi+kehak+s
     EPX70838.1 137 dpkARGPLICKLRKEQEISLRCIAKKGIAKEHAKWS 172
                    6669*******************************8 PP

>> RNA_pol_L  RNA polymerase Rpb3/Rpb11 dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.6   0.0   5.2e-23   4.6e-19       2      69 .]      19     256 ..      18     256 .. 0.79

  Alignments for each domain:
  == domain 1  score: 67.6 bits;  conditional E-value: 5.2e-23
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxx...................................................................... RF
   RNA_pol_L   2 fllrgvdhtlgNaLRrillsevpgvaiea...................................................................... 30 
                 f+l ++d++++N+LRr+ l+e+p+vai+                                                                       
  EPX70838.1  19 FVLTNTDLSIANSLRRVVLAEIPTVAIDLveinvntsvmpdeflahrlgmiplnstnidepppvgleytrncdcdqycakcsvemnlnakclgegtmev 117
                 999************************************************999999999998888888888888888888888888888888888888 PP

                 .......................................................xx.......................................... RF
   RNA_pol_L  31 .......................................................pv.......................................... 32 
                                                                        p+                                          
  EPX70838.1 118 yardlvvssnstlgqpiladpkargplicklrkeqeislrciakkgiakehakwsPTaavafeydpwnklrhtdywfendadaewpksknadweeppre 216
                 888888888877777777776666666666666666666666666665555555511555666666666666666666666666666777777777777 PP

                 ...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   RNA_pol_L  33 ...vkvntdkdklilevetdgslkPeealkeAlkiLkekl 69 
                    +++++++ ++++eve +gs++P e++ ++l++L+ekl
  EPX70838.1 217 geaINYQEEPRRFYMEVEGVGSIPPNEIMVQGLRVLQEKL 256
                 7778999*******************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (297 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       479  (0.0267165); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 2015.16
//
Query:       EPX70839.1  [L=487]
Description: anthranilate synthase component I [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.7e-92  309.7   0.0    2.2e-92  309.3   0.0    1.1  1  Chorismate_bind  chorismate binding enzyme
    4.5e-26   91.8   0.2    2.6e-22   79.6   0.2    4.0  3  Anth_synt_I_N    Anthranilate synthase component I, N termina


Domain annotation for each model (and alignments):
>> Chorismate_bind  chorismate binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  309.3   0.0   2.4e-96   2.2e-92       2     258 .]     212     466 ..     211     466 .. 0.98

  Alignments for each domain:
  == domain 1  score: 309.3 bits;  conditional E-value: 2.4e-96
                      HCHHHHHHHHHHHHHHTTS-SEEEEEEEEEECESS-B-HHHHHHHHHCTBSSSEEEEEEETTEEEEEEESSEEEEEETTSEEEEECEEEEEEHS CS
  Chorismate_bind   2 redYaeavekvkeeiragdlykvvlsrrlkaeleaavdplalyralrarnpapysflleledsellgaSPElllkveggrrietepiaGTrarg 95 
                      +e Y++ v+++k++i++gd++++v+s+rl+ +  ++++p++lyr+lr+ np+py+f+l++++++++gaSPEll+k e+g ri  +piaGT +rg
       EPX70839.1 212 EEGYKNYVSTLKKHIHQGDIFQAVPSQRLSRP--TDLHPFNLYRHLRTVNPSPYMFYLNCDEFDIIGASPELLVKSEDG-RIINHPIAGTVPRG 302
                      689*****************************..99*****************************************66.************** PP

                      SSHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCBSCCEEEEECCEEEEEETTEEEEEEEEEEEESTT--HHHHHHHCSS-CCCSEESHHH CS
  Chorismate_bind  96 ktpeedealeeelledeKeraEhlmivdlirndLgkvakpgsvkvpelfkverysevlhlvstiegelkedvslldllkalfPtgavtGaPkkr 189
                      kt+eedeal++ell++ K+raEh+m+vdl+rnd+++v+  ++ +v++l+++e++s+v+hlvs+++g l+e+++ +d+++++fP+g+v+G Pk r
       EPX70839.1 303 KTQEEDEALANELLSSVKDRAEHVMLVDLARNDVNRVCDLDTTRVDRLMTIEKFSHVQHLVSQVSGVLREGKTRFDAFRSIFPAGTVSGSPKVR 396
                      ********************************************************************************************** PP

                      HHHHHHHHSSS--TTTTSEEEEEET.TS-EEEEEE-SEEEEETTEEEEEEEEEEETT--HHHHHHHHHHH CS
  Chorismate_bind 190 ameiidelEearRgvYaGavgylda.dgeaelavvIRtavvkdkelrlgaGaGIvadSdpeaEyeEtlaK 258
                      a+++++ lE+++Rg+YaGavg ++  +++++++++IRt+v+k++ l+l+aG+GIv dSd +aEy Et +K
       EPX70839.1 397 AIQLVAGLENEKRGIYAGAVGHWGYkEDQMDTCIAIRTMVYKNGVLYLQAGGGIVFDSDEQAEYIETINK 466
                      ************************96778**************************************988 PP

>> Anth_synt_I_N  Anthranilate synthase component I, N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.6   0.2   2.8e-26   2.6e-22       1     141 [.      31     156 ..      31     157 .. 0.88
   2 !    4.4   0.0    0.0044        39      31      65 ..     270     309 ..     244     333 .. 0.64
   3 ?    0.5   0.0      0.07   6.3e+02      87     100 ..     408     421 ..     348     428 .. 0.77

  Alignments for each domain:
  == domain 1  score: 79.6 bits;  conditional E-value: 2.8e-26
  Anth_synt_I_N   1 ddltplsvylklaeee.hkflLeSaeneggegrySfigldpflelkskngevevegpegeeleeeepldalrellerfrsaedseptelpfvgGlv 95 
                    d ltp  +ylkl++ + ++++LeS+++ ++ +rySfig +         + +  +g       +e+pl+ l++ l+++++a++  ++ ++f+gG+v
     EPX70839.1  31 DLLTPSIAYLKLSQGKrYSYILESVSQGENVSRYSFIGSPY--------RVLMANG-------SEDPLARLERELKEVKIAPV--QGLPSFSGGAV 109
                    6789999*******999********977777*******998........3333444.......568*************7754..78999****** PP

  Anth_synt_I_N  96 GylgYDlvreie.klpksakddlnlpdarlilydtlivfDhkerrly 141
                    Gy++YD+++++e   +  ++d+l lp+a ++++d+li+fDh ++++ 
     EPX70839.1 110 GYVSYDCIKYFEpTTDVPTQDSLGLPEALFFMTDDLIAFDHAYQTVK 156
                    ************777788999999******************99886 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.0044
  Anth_synt_I_N  31 grySfigldpflelkskngeveveg.....pegeeleeee 65 
                    +++ +ig++p l +ks++g++  +      p g+ +ee e
     EPX70839.1 270 DEFDIIGASPELLVKSEDGRIINHPiagtvPRGKTQEEDE 309
                    469*******999999999987666777764344433333 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.07
  Anth_synt_I_N  87 elpfvgGlvGylgY 100
                    +  ++ G+vG +gY
     EPX70839.1 408 KRGIYAGAVGHWGY 421
                    444899*******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (487 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       518  (0.0288917); expected 358.6 (0.02)
Passed bias filter:                      457  (0.0254894); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.30s 00:00:00.85 Elapsed: 00:00:00.46
# Mc/sec: 3211.32
//
Query:       EPX70840.1  [L=86]
Description: cytochrome c oxidase subunit VIb [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-19   69.9   5.2      2e-19   69.6   5.2    1.1  1  COX6B     Cytochrome oxidase c subunit VIb
  ------ inclusion threshold ------
      0.075   12.8   1.2      0.095   12.4   1.2    1.2  1  NDUF_B7   NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7)
      0.078   13.0   1.3       0.15   12.1   1.3    1.4  1  CX9C      CHCH-CHCH-like Cx9C, IMS import disulfide relay-sys


Domain annotation for each model (and alignments):
>> COX6B  Cytochrome oxidase c subunit VIb
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.6   5.2   3.3e-23     2e-19       1      65 [.      22      77 ..      22      83 .. 0.95

  Alignments for each domain:
  == domain 1  score: 69.6 bits;  conditional E-value: 3.3e-23
       COX6B  1 araPnknqrkaCwearddyfkCldkkgeekaekkeeqdekkCkaekkeyesnCaksWveyfkekr 65
                ar+Pn+nq+k+C++++ dy++C+++kge         d  +Ck++ + ++s+C+++Wve+++e+r
  EPX70840.1 22 ARFPNTNQTKHCFQSYIDYHRCINAKGE---------DFVPCKQFWHAFQSLCPSEWVERWDEQR 77
                69**************************.........***************************6 PP

>> NDUF_B7  NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   1.2   1.6e-05     0.095      19      61 ..      32      74 ..      22      76 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.6e-05
     NDUF_B7 19 yCAhlLiplnkCrrenfplpwkCehekhayekCqyedyvrRmk 61
                +C + +i++++C + +   ++ C++  ha+++   +++v+R  
  EPX70840.1 32 HCFQSYIDYHRCINAKGEDFVPCKQFWHAFQSLCPSEWVERWD 74
                6999**************************9877888888865 PP

>> CX9C  CHCH-CHCH-like Cx9C, IMS import disulfide relay-system,
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.3   2.5e-05      0.15       6      31 ..      31      56 ..      29      58 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.5e-05
        CX9C  6 kyCpkefeaYhkCvssnqswpekCke 31
                k+C +    Yh+C+ ++ ++   Ck+
  EPX70840.1 31 KHCFQSYIDYHRCINAKGEDFVPCKQ 56
                9***************9998888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       374  (0.0208601); expected 358.6 (0.02)
Passed bias filter:                      269  (0.0150036); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 623.75
//
Query:       EPX70841.1  [L=279]
Description: ubiquitin/metalloprotease fusion protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      7e-42  143.7   3.9    1.3e-41  142.8   3.0    1.8  1  WLM             WLM domain
    1.1e-07   31.5   0.2      2e-07   30.7   0.2    1.5  1  ubiquitin       Ubiquitin family
     0.0033   17.5   3.4      0.014   15.4   3.4    2.3  1  DUF45           Protein of unknown function DUF45
  ------ inclusion threshold ------
      0.023   15.1   0.9        2.6    8.4   0.2    2.3  2  Minor_capsid_3  Minor capsid protein from bacteriophage
      0.052   13.4   0.1      0.087   12.7   0.1    1.5  1  SprT-like       SprT-like family


Domain annotation for each model (and alignments):
>> WLM  WLM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.8   3.0   3.7e-45   1.3e-41       6     154 ..     115     262 ..     110     273 .. 0.91

  Alignments for each domain:
  == domain 1  score: 142.8 bits;  conditional E-value: 3.7e-45
         WLM   6 ikvlkkkpekeaalellkriakd..vqpimkkhkfkVglLtElaPkean.....lLGlNvnkGekieLrLRtdkddkeflpyesimgtllHELaHnvyg 97 
                 ++vl+  p ke+al++l+r+++d  +q im+ h+++V lL+E++P+e++     +LGlN n+G++ieLrLRtd + ++f++y++++ tl+HEL Hnv+g
  EPX70841.1 115 FEVLN-YPFKERALQYLERLRDDagIQRIMNTHRWTVPLLSEMDPAEHTqhdskTLGLNHNHGAHIELRLRTDRY-DGFRDYKTVKSTLIHELSHNVHG 211
                 55666.89****************************************99*************************.9********************** PP

         WLM  98 pHdakFyallkeLekeveelkakGlkegflkeGkrlggkevrnksaeeeeekealek 154
                 +Hda+F++l  +L+ke+e+++         k+G  +++++ +  +++e+++++++++
  EPX70841.1 212 EHDASFWELFRQLTKEAEAADL------LSKPGSYVSEQATYVPQNNETTDEDQRDH 262
                 **********************......79999999999999887766666655554 PP

>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.7   0.2   5.5e-11     2e-07       8      70 ..       9      69 ..       3      71 .. 0.91

  Alignments for each domain:
  == domain 1  score: 30.7 bits;  conditional E-value: 5.5e-11
                SEEEEEEEETTSBHHHHHHHHHHHHTSSGGGEEEEETTEEE-TTSBHGGHTTSTTEEEEEEES CS
   ubiquitin  8 gkkitleveesdtveelKekiaekegipaeqqrLiysGkvLedertleeygiqdgstlhlvlr 70
                g+ i++ + e++tv++ Kek+ ++ g+ a+q++L+y+G + ++e++l+++ ++d+++++  ++
  EPX70841.1  9 GNVISIYFHEEETVRSAKEKLGQEIGFSADQIKLLYKGSL-SNESKLQDV-VKDKAKVMTIVN 69
                778899999*****************************97.*********.999999987765 PP

>> DUF45  Protein of unknown function DUF45
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   3.4   3.9e-06     0.014     170     198 ..     201     229 ..      50     234 .. 0.96

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 3.9e-06
       DUF45 170 vvHElaHlleknHskrFwalvekllPdwk 198
                 ++HEl H ++ +H + Fw+l  +l+ +++
  EPX70841.1 201 LIHELSHNVHGEHDASFWELFRQLTKEAE 229
                 79*******************99987766 PP

>> Minor_capsid_3  Minor capsid protein from bacteriophage
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.2   0.00073       2.6      42     108 ..      49     123 ..      30     126 .. 0.84
   2 ?    5.0   0.0    0.0082        29      79     115 ..     223     258 ..     191     263 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00073
  Minor_capsid_3  42 snkkeymDGtkevelnyeiaakskdeqkasqvleelselldeleie..........lpslngsYtfesleitskPfl 108
                     sn+++ +D  k++   ++i+ k++  + +++ +++l++   +   +           p + +sYtf++ e+ + Pf+
      EPX70841.1  49 SNESKLQDVVKDKAKVMTIVNKNA--NVVDETMSQLNSPRKNAASSyalkpkkprsTPKEASSYTFNRFEVLNYPFK 123
                     678888888888888899998888..7789999999999988886688999999999****************9996 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.0082
  Minor_capsid_3  79 elldeleie.lpslngsYtfesleitskPflieidedg 115
                     +l  e e++ l s++gsY  e+ +   +P+ +e ++++
      EPX70841.1 223 QLTKEAEAAdLLSKPGSYVSEQATY--VPQNNETTDED 258
                     3444444445***********9999..99999998875 PP

>> SprT-like  SprT-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   2.4e-05     0.087      27     101 ..     131     226 ..      75     253 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 2.4e-05
   SprT-like  27 krlnttaGranlkr..........................atvrhhasIeLsekllds...rsedrllntLaHElcHlalfvisgvrnnpHGaeFkawa 96 
                 +rl+  aG  ++ +                           +++h a+IeL  +  ++   r+ + +++tL+HEl H +     g     H+a+F ++ 
  EPX70841.1 131 ERLRDDAGIQRIMNthrwtvpllsemdpaehtqhdsktlgLNHNHGAHIELRLRTDRYdgfRDYKTVKSTLIHELSHNVH----G----EHDASFWELF 221
                 566666666655557777778888888888888888888855566666666555444444788999***********764....3....5777776666 PP

   SprT-like  97 akvek 101
                 +++ k
  EPX70841.1 222 RQLTK 226
                 66655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (279 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       772  (0.0430587); expected 358.6 (0.02)
Passed bias filter:                      407  (0.0227007); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1977.46
//
Query:       EPX70842.1  [L=245]
Description: 20S proteasome component alpha 2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.4e-59  200.0   0.1    3.2e-59  199.6   0.1    1.2  1  Proteasome      Proteasome subunit
    1.1e-09   37.7   0.3    3.1e-09   36.4   0.0    1.9  2  Proteasome_A_N  Proteasome subunit A N-terminal signature


Domain annotation for each model (and alignments):
>> Proteasome  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  199.6   0.1   3.6e-63   3.2e-59       1     189 [.      28     212 ..      28     213 .. 0.96

  Alignments for each domain:
  == domain 1  score: 199.6 bits;  conditional E-value: 3.6e-63
                 HHHS-EEEEEEETTEEEEEEEEEEEETTEEEESSSSTSEEEEETTEEEEEEESHHHHHHHHHHHHHHHHH.HHHHHSSGTCHHHHHHHHHHHHHHHHHH CS
  Proteasome   1 vkkGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigvafaGlaaDartlvrraraeaql.yrlrygrpipverlvarvaaklqaytqr 98 
                 v+ G t+vGik+++gvvla++k+    s+l+  s++eK++ki++ ig++++G+ +D+r+lv++ r+ aq+ y+  y+  +p+++lv+++a+ +q+ tq+
  EPX70842.1  28 VNAGVTSVGIKATNGVVLATEKKPA--SELAVGSSLEKVCKITPDIGMVYSGMGPDFRVLVDKSRKVAQTaYKNVYNAYPPTKILVQEIASVMQESTQS 124
                 67899******************99..99999999**********************************637788************************ PP

                 CTTTTTSEEEEEEEEETTTEEEEEEEETTSEEEEESSEEEESTTHHHHHHHHHHHHSTTBSHHHHHHHHHHHHHHHHHHBTTSCSSEEEEE CS
  Proteasome  99 sgrrpfgvslliagvdeeggpeLyqidpsGsyieekdavaiGsgseaaktalekeykedltleeavelavkalkealerdklsgknievav 189
                 +g+rpfgvsll+ag+de+g p Lyq+dpsG+y+++k a+aiG+ s+aakt+lek+y+ +++l++a+++a+ alke++e++ l+++ i++a+
  EPX70842.1 125 GGVRPFGVSLLVAGMDENG-PVLYQVDPSGTYFAWK-ATAIGKSSTAAKTFLEKRYNNEIELDDAIHTAILALKETFEGE-LTEDSIDIAI 212
                 ****************998.***************8.*****99**********************************77.*******998 PP

>> Proteasome_A_N  Proteasome subunit A N-terminal signature
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.4   0.0   3.4e-13   3.1e-09       3      23 .]       7      27 ..       5      27 .. 0.94
   2 ?   -1.6   0.1      0.25   2.3e+03      14      18 ..     146     150 ..     146     150 .. 0.90

  Alignments for each domain:
  == domain 1  score: 36.4 bits;  conditional E-value: 3.4e-13
  Proteasome_A_N  3 rslttFSPdGRLfQVEYAmkA 23
                    +slttFSP G+L Q+EYA++A
      EPX70842.1  7 FSLTTFSPNGKLVQIEYALNA 27
                    79*****************98 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.25
  Proteasome_A_N  14 LfQVE 18 
                     L+QV+
      EPX70842.1 146 LYQVD 150
                     8***7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       491  (0.0273858); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1751.00
//
Query:       EPX70843.1  [L=84]
Description: hypothetical protein SOCG_05940 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       349  (0.0194657); expected 358.6 (0.02)
Passed bias filter:                      175  (0.00976072); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.24s 00:00:00.60 Elapsed: 00:00:00.41
# Mc/sec: 614.21
//
Query:       EPX70844.1  [L=268]
Description: hypothetical protein SOCG_04114 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
        0.3   10.3   1.2       0.44    9.7   1.2    1.4  1  Herpes_LMP1  Herpesvirus latent membrane protein 1 (LMP1)


Domain annotation for each model (and alignments):
>> Herpes_LMP1  Herpesvirus latent membrane protein 1 (LMP1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   1.2   2.4e-05      0.44      66     124 ..      74     136 ..      39     182 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 2.4e-05
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXX.XXXXXXXXXXXXXXXX CS
  Herpes_LMP1  66 iliififrrdllcplgalcllllmitlllial.....wnlhgqalylg.ivlfifgcllvlglwi 124
                  i+ii++f    l  +ga c+ll+m   + + +     w l+g   ++g i lf++   l+   w 
   EPX70844.1  74 IIIIYLFFFASLGYIGAYCILLVMFFYFKVPVraqdfWGLFGG--FIGaISLFLYSMSLIPKEWF 136
                  67888888899*************9888775411111666664..33327788888877776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (268 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       923  (0.0514808); expected 358.6 (0.02)
Passed bias filter:                      473  (0.0263818); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 1924.13
//
Query:       EPX70845.1  [L=177]
Description: hypothetical protein SOCG_04113 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-13   50.2   1.2    2.1e-12   47.2   0.0    2.1  2  ApoO        Apolipoprotein O
  ------ inclusion threshold ------
      0.042   12.9   0.0      0.054   12.6   0.0    1.2  1  Ca_hom_mod  Calcium homeostasis modulator


Domain annotation for each model (and alignments):
>> ApoO  Apolipoprotein O
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.2   0.0   2.3e-16   2.1e-12      15     116 ..      22     124 ..       5     134 .. 0.79
   2 ?    2.3   0.7     0.017   1.5e+02      26      58 ..     137     169 ..     124     177 .] 0.39

  Alignments for each domain:
  == domain 1  score: 47.2 bits;  conditional E-value: 2.3e-16
        ApoO  15 rLeegvrslRkslepytsavqdelnkvkskvetaeqsvtdti.asLkeppedllPrlgyilvagLaGsilarrrsilkRvlyPlalgglaaslfyPqta 112
                  L+  +++ R +++  +  +  +l+++  ++ ++e+ + +   +++  + e+ lP+++y++v+g+aG i+ar+r  ++R l++ +  ++++ ++ P+t 
  EPX70845.1  22 WLADRIHHGRSTVYCALGFAGLKLENAFGWLLSKERATVSVAkQEIFCSDERKLPGIAYVAVGGMAGNIFARNRIAPARWLVTSLATAGTFVYCFPKTS 120
                 677778888888888888888888888887777776655544144555559***********************************************7 PP

        ApoO 113 kntg 116
                 k   
  EPX70845.1 121 KKFA 124
                 7665 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.017
        ApoO  26 slepytsavqdelnkvkskvetaeqsvtdtias 58 
                   e+ + ++ ++l++++s+v    +  +  +++
  EPX70845.1 137 RREQLSRQTRETLQNTESSVSRYTSLAQIHYQQ 169
                 333333333333333333333333333333332 PP

>> Ca_hom_mod  Calcium homeostasis modulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0     6e-06     0.054      96     166 ..      82     154 ..      40     170 .. 0.60

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 6e-06
  Ca_hom_mod  96 l.lavllsillralvaPvtWiavaLLd.gkfyeCaasgsesvdlekllckeke..esceeelakvpckesklaev 166
                 +   +  +i++r  +aP+ W++ +L + g+f  C   +s  ++++++++++    ++ +e+l++ + ++ +++e 
  EPX70845.1  82 AvGGMAGNIFARNRIAPARWLVTSLATaGTFVYCFPKTS--KKFATFTETRFPalRERREQLSRQTRETLQNTES 154
                 24678999*****************86267778995555..5555555422222233344555544444333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       732  (0.0408277); expected 358.6 (0.02)
Passed bias filter:                      494  (0.0275531); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1338.10
//
Query:       EPX70846.1  [L=613]
Description: Swr1 complex bromodomain subunit Brf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.9e-48  162.5   0.5    2.3e-23   82.0   0.0    2.9  3  Bromodomain  Bromodomain
    2.2e-16   59.7   0.0      1e-15   57.7   0.0    2.2  2  BET          Bromodomain extra-terminal - transcription regul


Domain annotation for each model (and alignments):
>> Bromodomain  Bromodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.0   0.0   2.6e-27   2.3e-23       1      78 [.     112     191 ..     112     197 .. 0.96
   2 !   77.4   0.1   7.2e-26   6.4e-22       1      79 [.     293     376 ..     293     381 .. 0.92
   3 ?   -1.6   0.0      0.32   2.9e+03       8      39 ..     413     442 ..     411     448 .. 0.87

  Alignments for each domain:
  == domain 1  score: 82.0 bits;  conditional E-value: 2.6e-27
                  HHHHHHHBHTTTCGGGGCSTT..-GCCSTTHHHH.SS---HHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHSHTTSHH CS
  Bromodomain   1 lekilsellehklaepFlepv..dpeefpdyyavikkPldLstIkkklesnkYksladfeadlkllfsNarkyngegsvi 78 
                  + +i+++l+++k+++pF+ pv   + + pdy++++k+P+dL tI+kkl ++ Y+s+++f +d++l+fsN+  yng +s++
   EPX70846.1 112 CAAIVRQLKRTKDSAPFRAPVdpVKQNIPDYPTIVKQPMDLGTIEKKLSNRIYSSPQEFIDDMNLMFSNCFLYNGTNSPV 191
                  789******************99999****************************************************98 PP

  == domain 2  score: 77.4 bits;  conditional E-value: 7.2e-26
                  HHHHHHHBHTTT...CGGGGCSTT..-GCCSTTHHHH.SS---HHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHSHTTSHHH CS
  Bromodomain   1 lekilsellehk...laepFlepv..dpeefpdyyavikkPldLstIkkklesnkYksladfeadlkllfsNarkyngegsviy 79 
                  + +il+e+++++   +  pF +pv      +pdy++vik+P+dLstI++kl +n+Y+ +++fe d++l+++N+ +yn++g++++
   EPX70846.1 293 CTTILKEIYKRQyepFVFPFYQPVdpVACDCPDYFDVIKHPMDLSTIQAKLSKNEYEIPDEFESDIRLMLENCFTYNPPGTPVH 376
                  67888889998888899*******7666789**************************************************986 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 0.32
                  BHTTTCGGGGCSTT-GCCSTTHHHH.SS---H CS
  Bromodomain   8 llehklaepFlepvdpeefpdyyavikkPldL 39 
                  l+e+ + e+F++  ++e++ d +a++ k++++
   EPX70846.1 413 LYENGDEEAFMS--EEEVNGDKFAAVDKQISM 442
                  678889999996..899999999999999997 PP

>> BET  Bromodomain extra-terminal - transcription regulation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.48   4.3e+03       8      20 ..     157     169 ..     156     174 .. 0.84
   2 !   57.7   0.0   1.1e-19     1e-15       1      64 []     472     534 ..     472     534 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.48
         BET   8 keLseeInkLpge 20 
                 k+Ls++I + p+e
  EPX70846.1 157 KKLSNRIYSSPQE 169
                 69******99987 PP

  == domain 2  score: 57.7 bits;  conditional E-value: 1.1e-19
         BET   1 pmtyeeKkeLseeInkLpgeklgrvveIIqerepelqsdedEiElDidaldddtLreLekyvkk 64 
                 p+ty++++eL+e++n L++e+l +v eI++e +p l  d dEiE+D+ +++++t+++++++v+k
  EPX70846.1 472 PVTYAMQTELAERCNYLTAEQLATVAEILREEMPWL-RDTDEIEIDVGNMKPETFHRIYRFVCK 534
                 79********************************99.799**********************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (613 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1382  (0.0770818); expected 358.6 (0.02)
Passed bias filter:                      468  (0.026103); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.28s 00:00:00.92 Elapsed: 00:00:00.43
# Mc/sec: 4264.62
//
Query:       EPX70847.1  [L=261]
Description: ribonucleoprotein complex [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-10   40.0   0.0    5.5e-10   39.5   0.0    1.2  1  Utp12     Dip2/Utp12 Family
  ------ inclusion threshold ------
       0.36   10.1  20.4        0.4   10.0  20.4    1.1  1  BUD22     BUD22


Domain annotation for each model (and alignments):
>> Utp12  Dip2/Utp12 Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.5   0.0   6.1e-14   5.5e-10       3     106 ..      18     117 ..      16     118 .. 0.92

  Alignments for each domain:
  == domain 1  score: 39.5 bits;  conditional E-value: 6.1e-14
                 HHHHH.HHHSS-TTTHHHHHHCS-CTCHHHHHHHHHHHH.HTTTTHHHHHHHHHHHHHHHHHHHHHSH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       Utp12   3 eelleevlekippsdirltvlrLpssyvlkLLeflaerlaeksphlelllrwlkallrvHgsylvaspsdlvpaLrslqkslrerlktlskllglnlgr 101
                 +el e++l  +++  ++ tv++++ +++ +L +  ++ +  +     ++  wl++++++Hg+yl++ ++ l++ L++l+ +l ++ ++l k+++l+ gr
  EPX70847.1  18 NELFEKCLGCSDVGIVSGTVRNMDGTMAAELVRKFVTEM--SLEMRPTMAIWLHWIIVTHGGYLASVQD-LQEPLNELHGKLIHGGDLLMKISALS-GR 112
                 6899****************************9999966..334557999******************6.**************************.** PP

                 HHHHH CS
       Utp12 102 Ldyll 106
                 L ++l
  EPX70847.1 113 LSMVL 117
                 **986 PP

>> BUD22  BUD22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0  20.4   4.5e-05       0.4     157     263 ..     126     254 ..      86     261 .] 0.44

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 4.5e-05
       BUD22 157 kkkkkeeeeeeesdkeeesedsed....eekeeseddeeeeeededdedaee...................deedeeaeerelaqydgllasddeded. 231
                 +  ++ee++ee+sd e+e++++ d    +   e+ed+ +e+ee+e  +   +                    +++ + ++r++++ d+l  s++ed+d 
  EPX70847.1 126 RRLDQEESSEEDSDYEDEQNSDYDieivD---ENEDEVDENEEEEAAAA--AaeimkhnnvdkdtahaylsPDAELSPRRRQMENKDHL--SEEEDDDa 217
                 22222223333344444444444432221...22222221122221111..12244444444444556666445555666666666664..55555553 PP

       BUD22 232 .....eyneetdeesseesdssdssesasesesesse 263
                      ++  e+ +es+ee++ s + +  ++ +ses+ 
  EPX70847.1 218 ralqeNATGESGSESEEEAEASRPVSVRKNLRSESPR 254
                 4554433333333333333333333333333333322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1698  (0.0947069); expected 358.6 (0.02)
Passed bias filter:                      654  (0.0364772); expected 358.6 (0.02)
Passed Vit filter:                        87  (0.00485247); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.33s 00:00:00.93 Elapsed: 00:00:00.47
# Mc/sec: 1680.26
//
Query:       EPX70848.1  [L=213]
Description: translation elongation factor EF-1 beta subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-30  105.6   0.2    1.9e-30  104.9   0.2    1.4  1  EF1_GNE         EF-1 guanine nucleotide exchange domain
      3e-11   43.6   4.3    8.9e-11   42.0   4.3    1.9  1  EF-1_beta_acid  Eukaryotic elongation factor 1 beta central a
    0.00076   19.6   0.6     0.0017   18.5   0.0    1.8  2  GST_C_3         Glutathione S-transferase, C-terminal domain
     0.0029   17.6   1.0      0.027   14.5   0.4    2.5  2  GST_C_2         Glutathione S-transferase, C-terminal domain
  ------ inclusion threshold ------
        0.1   12.4   0.0       0.23   11.3   0.0    1.5  1  GST_C_6         Glutathione S-transferase, C-terminal domain
       0.53   10.5   3.4       0.82    9.9   0.1    2.8  3  GST_C           Glutathione S-transferase, C-terminal domain


Domain annotation for each model (and alignments):
>> EF1_GNE  EF-1 guanine nucleotide exchange domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.9   0.2   6.4e-34   1.9e-30       2      90 .]     130     213 .]     129     213 .] 0.97

  Alignments for each domain:
  == domain 1  score: 104.9 bits;  conditional E-value: 6.4e-34
                 EEEEEEESSS---HHHHHHHHHH.HS-TSEE--.--EEE-SSS-EEEEEEEEESSS-GGGGHHHHHHTTS-S.....SEEEEEEEEEE- CS
     EF1_GNE   2 vvlevkPeddetdleelekkvksikleglvwgeasklepiafGlkkLqiscvieddkvstdeleekieeiegeledlVqsveivsfnkl 90 
                 v+++vkP+ddet ++elek+v+ i+++gl wg  s+l+p++fG++k qi++v+eddkvs+++l+e++e    +led+Vqs+++++++kl
  EPX70848.1 130 VTMDVKPWDDETPMDELEKAVRGIQMDGLLWG-VSRLVPVGFGVNKFQINLVVEDDKVSLEALQEELE----GLEDYVQSTDVAAMSKL 213
                 89******************************.6**********************************....6899***********97 PP

>> EF-1_beta_acid  Eukaryotic elongation factor 1 beta central acidic region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.0   4.3     3e-14   8.9e-11       1      28 []      93     118 ..      93     118 .. 0.98

  Alignments for each domain:
  == domain 1  score: 42.0 bits;  conditional E-value: 3e-14
  EF-1_beta_acid   1 LFGSDDEEEDeEaerlreeRLaaYaaKK 28 
                     LFGSD+E+  +Eaer+++eR+a+Y++KK
      EPX70848.1  93 LFGSDEED--PEAERVKAERVAEYEKKK 118
                     9****999..*****************9 PP

>> GST_C_3  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   5.5e-07    0.0017      33      89 ..      12      63 ..       3      65 .. 0.90
   2 ?   -2.4   0.1       1.9   5.7e+03      88      98 ..     108     117 ..      98     129 .. 0.64

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 5.5e-07
                HHHHHHHHHCHGTSSSSTTS--HHHHHHHHHHHHHHHHTCCCC-HHHHHHHHHHHTS CS
     GST_C_3 33 lkyfekvlkkkgggylvgdklTyADlalfqvldgleeaealkkfpklkalyervear 89
                lk+++ +l+   + ++ g++ + AD ++f+++     a   +kfp+++++y++++ +
  EPX70848.1 12 LKQLNDYLT--DKSFIEGHSASQADAVVFKAVGSAPDA---EKFPNAARWYKQIATH 63
                889999999..788*********************999...89***********976 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.9
                 TSHHHHHHHCT CS
     GST_C_3  88 arpkikaYles 98 
                 a +++++Y ++
  EPX70848.1 108 A-ERVAEYEKK 117
                 3.455555543 PP

>> GST_C_2  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.4   8.9e-06     0.027      12      67 ..       9      57 ..       7      59 .. 0.78
   2 ?   -3.1   0.0       2.7   8.1e+03      16      23 ..     189     196 ..     180     203 .. 0.59

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 8.9e-06
                CHCHHHCTTT---SS.CTTCS--HHHHHHHHHHHHHHHHHHS----TT-HHHHHHH CS
     GST_C_2 12 daaldaleahLadspflfGdqptlaDialapflvrlraagpgfdireaypnlraWl 67
                da l++l+++L+d++f+ G   + aD++++  ++ +  a        ++pn ++W+
  EPX70848.1  9 DAGLKQLNDYLTDKSFIEGHSASQADAVVFKAVGSAPDAE-------KFPNAARWY 57
                789*************************986665543333.......566666666 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 2.7
                 HHCTTT-- CS
     GST_C_2  16 daleahLa 23 
                 +al+++L+
  EPX70848.1 189 EALQEELE 196
                 44444443 PP

>> GST_C_6  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   7.6e-05      0.23       5      31 ..      12      38 ..       9      52 .. 0.94

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 7.6e-05
     GST_C_6  5 leaLselLgdkkyFfGdkPtslDAlvF 31
                l+ L ++L dk ++ G++ + +DA+vF
  EPX70848.1 12 LKQLNDYLTDKSFIEGHSASQADAVVF 38
                78899***********99********9 PP

>> GST_C  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.1   0.00027      0.82      35      92 ..      12      63 ..       8      64 .. 0.81
   2 ?   -0.8   0.2       0.6   1.8e+03      21      43 ..      98     119 ..      72     130 .. 0.64
   3 ?   -2.0   0.0       1.4   4.2e+03      32      46 ..     185     200 ..     174     205 .. 0.59

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00027
                HHHHHHHHHTSSSSSTTSSCHHHHHHHHHHHHHHHHTTTTTTTTSHHHHHHHHHHHTS CS
       GST_C 35 lsaleeelkkqdylvGdkltlADialvpilnwlqrlglafgqekfpnlkawlerimar 92
                l++l+ +l ++ ++ G   + AD++++ ++      g a++ ekfpn  +w++ i+ +
  EPX70848.1 12 LKQLNDYLTDKSFIEGHSASQADAVVFKAV------GSAPDAEKFPNAARWYKQIATH 63
                778888899999999999999999988775......4555579**********99876 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.6
                 HHHHHHHHHHHHHHHHHHHHHHH CS
       GST_C  21 eelvdealekvaevlsaleeelk 43 
                 e +  ea++ +ae ++ +e++ +
  EPX70848.1  98 E-EDPEAERVKAERVAEYEKKKS 119
                 3.555555556666666665544 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 1.4
                 HHHHHHHHHHHH.TSS CS
       GST_C  32 aevlsaleeelk.kqd 46 
                 +++l+al eel+  +d
  EPX70848.1 185 KVSLEALQEELEgLED 200
                 4555555555554333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       702  (0.0391544); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1635.53
//
Query:       EPX70849.1  [L=140]
Description: mediator complex subunit Med19/Rox3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-15   57.4   0.0    6.5e-14   52.7   0.0    2.0  1  Rox3      Rox3 mediator complex subunit
  ------ inclusion threshold ------
       0.13   12.1   0.1       0.17   11.7   0.1    1.2  1  NDUF_B4   NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4)


Domain annotation for each model (and alignments):
>> Rox3  Rox3 mediator complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.7   0.0   7.2e-18   6.5e-14       3      70 ..      19      80 ..      17     140 .] 0.71

  Alignments for each domain:
  == domain 1  score: 52.7 bits;  conditional E-value: 7.2e-18
        Rox3  3 rPnpsedLielYgLteiaaeVARtdpvtGeKinkLRKsYkgkikklglsGkfkavkkkeegkegelle 70
                +P+p+e+L elYgL+e+a++V R d   G+K  k+R+sYk +i++l   G+++ + k++   +++l++
  EPX70849.1 19 KPSPHENLTELYGLSELAKKVGRIDE-HGNK-RKMRRSYKAYIQDL--PGHNEII-KDD-TLKQWLAN 80
                7*************************.7***.**************..*******.555.33333333 PP

>> NDUF_B4  NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1     2e-05      0.17      16      65 ..      27      78 ..      13      90 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 2e-05
                GGGTS--HHHHHH.HHHHHHHHHHHHHHHHHHHH-.TTT-S----HHHHHHH CS
     NDUF_B4 16 PaeYdlspeerra.elerlalrarLKreYllqlnd.PkrkgliedPallrWv 65
                 + Y+ls+  +++  ++    + +++r Y +  +d P ++++i+d +l +W+
  EPX70849.1 27 TELYGLSELAKKVgRIDEHGNKRKMRRSYKAYIQDlPGHNEIIKDDTLKQWL 78
                4669999988886367888999*********99988999************4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       331  (0.0184617); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 995.94
//
Query:       EPX70850.1  [L=173]
Description: monothiol glutaredoxin Grx3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.2e-13   48.6   0.0    1.1e-12   47.9   0.0    1.3  1  Glutaredoxin  Glutaredoxin


Domain annotation for each model (and alignments):
>> Glutaredoxin  Glutaredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.9   0.0   6.4e-17   1.1e-12       1      60 []      73     138 ..      73     138 .. 0.92

  Alignments for each domain:
  == domain 1  score: 47.9 bits;  conditional E-value: 6.4e-17
                   EEEEESTSSHHHHHHHHHH.HHTTGG..EEEEEGCCSH...HHHHHHHHHHTSSSSSEEEETTEEE CS
  Glutaredoxin   1 vvlftkptCpyCkkakrlL.kelgvk..feeidvdkde...eireelkelsgvrtvPqvfidgkhv 60 
                   v++f+kp+Cp++k+a+  L ++l+++    +++v++     e+r +l ++s+v+t+P++f++g+ +
    EPX70850.1  73 VMVFSKPGCPFSKAARSMLtETLNMEpaPVIVEVTEYThttELRTWLSSISDVSTLPNIFFGGHSI 138
                   89*****************8778877668999999998899**********************876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       373  (0.0208043); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.44
# Mc/sec: 1175.30
//
Query:       EPX70851.1  [L=347]
Description: D-amino acid oxidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.9e-30  106.7   0.0    2.4e-30  106.3   0.0    1.1  1  DAO            FAD dependent oxidoreductase
  ------ inclusion threshold ------
      0.011   15.0   0.0      0.025   13.8   0.0    1.6  2  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
      0.027   14.7   0.3      0.081   13.2   0.2    1.9  2  NAD_binding_8  NAD(P)-binding Rossmann-like domain
      0.079   12.2   0.0       0.19   10.9   0.0    1.6  1  Thi4           Thi4 family
       0.12   11.6   0.0       0.18   11.0   0.0    1.2  1  FAD_binding_3  FAD binding domain
       0.13   12.8   0.1       0.29   11.7   0.1    1.6  1  Pyr_redox      Pyridine nucleotide-disulphide oxidoreductase


Domain annotation for each model (and alignments):
>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.3   0.0   8.1e-34   2.4e-30       1     346 [.       8     333 ..       8     335 .. 0.74

  Alignments for each domain:
  == domain 1  score: 106.3 bits;  conditional E-value: 8.1e-34
                 EEEEECTSHHHHHHHHHHHHTT....EEEEESSSSTTSSGGGSSEEEEESSS....STHHSTHHHHHHHHHHHHHHHHHHHHHSSTTSEEEEEEEEEES CS
         DAO   1 dvviiGGGiiGlstAyeLarrg....VtllekgdiagsgaSgrnsgllhsgl....rylpeaselarlslealeelreleeelgididyrrtGllslaa 91 
                 d++i+G+G+iGl+tA+ L   g    V ++ k+  +    S   +  ++++     +   e+ ++ r+ + ++++l+ l++++      +++G+++   
  EPX70851.1   8 DIAIVGAGVIGLTTAWILCDFGlgprVKIIAKH-TPE-DRSVDYTSPWAGANfcsiSGGDEK-AI-RWDRITYNRLAYLANTR------KESGVVFANL 96 
                 8*****************7666669********.888.666666666655554654322322.33.99999999998888662......3444444431 PP

                 ......SHHHHHHHHHHHHHHHHTTTTEEEEEHHHHHHHSTTSTTTSEEEEETTEEEEEHHHHHHHHHHHHHHTT-EEEESECEEEEEEEETCEEEEEE CS
         DAO  92 ......deeelealdkllallleagldaelldaeevrelepalpgllgalfypdtgqvdpakltaalaraaealGveilegtevtgleeedgkvwgver 184
                       d++ +e++    ++++++  d e l +ee+ e +     l g  ++ +t  ++  ++++++++ +++ Gv+++++ e++++++    ++ v  
  EPX70851.1  97 relwefDPN-FEKI----RSWTSYVKDFEALPKEELPENC-----LYG--HTGTTFLINVPQYLNFIYSILKDSGVTFVKE-EIKHIND---VLHYV-- 177
                 111111443.5555....4444344466889998555444.....567..999999************************9.****944...36666.. PP

                 ECTEEEEEEEEEEE--GGGHH.HHHTTCTTTSEEEEEEEEEEEEEECCTHSTGSGCSEEEEEEEETTTTEEEEEE.TTSEEEEEESSEEETTCSSTSCS CS
         DAO 185 ttpgendaadavVnaaGawsd.llgllkeldlpispvrgqvlvlkplseklvspaailpvpetdddgrgvyvtpr.kdgrvlvGgtadeesgdddpevd 281
                      n   + v n+ G+w++ l    +  d+ ++p+rg+v+ ++ ++ k+ +         ++  + ++y++pr  +g+v++Gg   + +++d+ e+ 
  EPX70851.1 178 ----PN-P-TVVFNCPGVWAStLG---GVEDKDVYPTRGHVVCVDAPHVKETRL--------RHGTNSDTYIIPRpFNGGVVLGGFM-QKGNWDR-EIH 257
                 ....22.4.78********99444...4347789**********6655544444........78888999****956889******9.8888888.*** PP

                 HHHHHHHHHHHHHHSGGG........CGEEEEEEEEEEETTSSEEEEEEE..TEE.EEEEEEECTTTHHHHHHHHH CS
         DAO 282 eedidellealrklfPql........gdvlrkwaGlrplpdglpligetp..gvk.glylatGhsghGltlapatG 346
                 +ed +++l++ ++l+P+l        +++ ++ +G+rp ++g+  +   +  g+k  l++ +G+sg G++ + +++
  EPX70851.1 258 PEDTQDILKRTAELMPELfhhqgpeaAKIIYEAVGFRPSRNGGARVELDSlpGTKfPLVHDYGASGTGYQAGYGMA 333
                 *****************6566766667799********8777555544224555569***************9987 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   8.4e-06     0.025     142     171 ..       6      37 ..       1      48 [. 0.81
   2 ?   -3.3   0.0       1.3     4e+03     227     243 ..     283     299 ..     275     308 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 8.4e-06
                  TSEEEEES-SHHHHHHHHHHHHHT-..EEEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxx..xxxxx RF
  Pyr_redox_2 142 pkrivvvGgGyiGvElAaalaklgk..evtlv 171
                   ++i++vG+G+iG+ +A  l+++g   +v ++
   EPX70851.1   6 TQDIAIVGAGVIGLTTAWILCDFGLgpRVKII 37 
                  479*****************999764466666 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.3
                  EESEEEE-S-EEES-HH CS
                  xxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 227 dadlvvvavGvrpstel 243
                  +a+ +  avG+rps+++
   EPX70851.1 283 AAKIIYEAVGFRPSRNG 299
                  56677779999999866 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.2   2.7e-05     0.081       1      27 [.      11      39 ..      11      41 .. 0.78
   2 ?   -3.1   0.0       3.2   9.6e+03      42      50 ..     310     322 ..     300     324 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.7e-05
                   EE--SHHHHHHHHHHHCC..TEEEEEE-S CS
  NAD_binding_8  1 IvGaGlsGlvaAylLaka..gfdvlllek 27
                   IvGaG+ Gl++A+ L +   g +v ++ k
     EPX70851.1 11 IVGAGVIGLTTAWILCDFglGPRVKIIAK 39
                   9**************98622447777655 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 3.2
                    T....CEECTS-- CS
  NAD_binding_8  42 g....vrvdygah 50 
                    g     ++dyga+
     EPX70851.1 310 GtkfpLVHDYGAS 322
                    4455578999986 PP

>> Thi4  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   6.4e-05      0.19      18      46 ..       7      36 ..       3      42 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 6.4e-05
                EEEEEE--SHHHHHHHHHHHHC.TTS-EEE CS
        Thi4 18 sDvvivGaGssGLtaayylakk.pdlkvai 46
                +D++ivGaG  GLt+a +l     + +v i
  EPX70851.1  7 QDIAIVGAGVIGLTTAWILCDFgLGPRVKI 36
                7*****************987643334444 PP

>> FAD_binding_3  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   6.2e-05      0.18       3      34 ..       8      41 ..       6      47 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 6.2e-05
                   EEEEE--SHHHHHHHHHHHHTTHH..EEEEESSS CS
  FAD_binding_3  3 dVlIVGaGpaGlmlallLseaGvr..vvlvekrs 34
                   d++IVGaG  Gl++a +L+  G    v ++ k++
     EPX70851.1  8 DIAIVGAGVIGLTTAWILCDFGLGprVKIIAKHT 41
                   789****************998754488888886 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   9.8e-05      0.29       2      29 ..       9      38 ..       8      43 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 9.8e-05
                EEEECSSHHHHHHHHHHHHTT..SEEEEEE CS
   Pyr_redox  2 vvvvGgGyiglElAgalaelg..kkVtvve 29
                +++vG+G+igl  A +l ++g   +V+++ 
  EPX70851.1  9 IAIVGAGVIGLTTAWILCDFGlgPRVKIIA 38
                89***************9977335888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (347 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       303  (0.0169); expected 358.6 (0.02)
Passed bias filter:                      300  (0.0167327); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.52u 0.29s 00:00:00.81 Elapsed: 00:00:00.48
# Mc/sec: 2185.39
//
Query:       EPX70852.1  [L=533]
Description: iron hydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.8e-62  209.1   0.0    2.8e-60  204.0   0.0    2.2  1  Fe_hyd_lg_C  Iron only hydrogenase large subunit, C-terminal 
  ------ inclusion threshold ------
      0.074   13.4   0.1       0.71   10.2   0.0    2.4  2  DUF3677      Protein of unknown function (DUF3677)
       0.21   11.5   0.5       0.63    9.9   0.1    2.1  2  EF-hand_8    EF-hand domain pair


Domain annotation for each model (and alignments):
>> Fe_hyd_lg_C  Iron only hydrogenase large subunit, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  204.0   0.0   4.7e-64   2.8e-60       3     243 .]     104     456 ..     102     456 .. 0.89

  Alignments for each domain:
  == domain 1  score: 204.0 bits;  conditional E-value: 4.7e-64
                  EEEEE-HHHHHHGGGGGT--T-S-HHHHHHHHHH.TT-SEEEETHHHHHHHHHHHHHHHHHHH.................................HH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxx.................................xx RF
  Fe_hyd_lg_C   3 vvvqvAPavrvalgeefglsvaattgklvaalrk.lGfdkVfdtafgadltimeeasellerl.................................ee 66 
                  ++v+ +P+vr++l+ ++g+s +++++ l  ++   lGf  V+dt+ ++++++++ a+e++e                                   + 
   EPX70852.1 104 FYVSSSPQVRANLAAYYGVSLEEMQEVLEMVFVGkLGFCTVLDTNAAREIVLQQCAEEFCESWkqrrrekesgndgaidinvsemqkdskdvaaslKA 201
                  6899*****************99999998776544**************************999999****************999998888766611 PP

                  ..TS-SSEE----HHHHHHHHHH-GGGGGGB--B--HHHHHHHHHHTHHHHH.....GGEEEEEEES-SSHHHHHTSTT-BBTB.BSS-EEEEHHHHH CS
                  ..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxx RF
  Fe_hyd_lg_C  67 ..eeklpmitScCPgwvkyvekkypellpnlssvkSPqqilgaliKkylaek.....ekivvVsimPCtaKklEaareefksag.rdvDavlTtrEla 156
                    ++klp+++S+CPgw++yvek++++l+p+ls+v+SPqq++g+liK+   ++     +++ ++s+mPC++KklEa+reef+++g rdvDavlT++E++
   EPX70852.1 202 npTAKLPILSSSCPGWICYVEKTHSALIPHLSQVRSPQQACGRLIKDWASKQfsisrKQVWHLSLMPCFDKKLEASREEFSEDGvRDVDAVLTPKEIV 299
                  5799******************************************987777****************************99889************* PP

                  HHHHHTT--GGGS-------TTSSSSSTSS-............................................TTEEEEE...EEE-TSEEEEEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............................................xxxxxxx...xxxxxxxxxxxxx RF
  Fe_hyd_lg_C 157 ellkeagidlakleeeeldnplgessgagki............................................egvkeae...velegktlkvavv 207
                  e++k+ ++d++++ ++++  ++++++  +                                               +++e +    + ++  l++a++
   EPX70852.1 300 EMFKHFDLDPKSILKNRISYQISDETLPAWYprltyveqmgsssggymnyvmsyaaemlfgihdanefvtkvdqnGDLTEYTlrePQSDEVLLTMATC 397
                  ************9888877766665555555888999999999999999*************9998888888888444444421133334466***** PP

                  ESHHHHHHHHHHH.......................HTTSS--SEEEEESSTTSGGG-T CS
                  xxxxxxxxxxxxx.......................xxxxxxxxxxxxxxxxxxxxxxx RF
  Fe_hyd_lg_C 208 nGlknikkllekl.......................kageakydfiEvmaCpgGCigGg 243
                  +G++ni++l++k+                       ++++ +yd++EvmaCpgGCi+Gg
   EPX70852.1 398 YGFRNIQNLVRKVngnssrrgqvllkrrmktdaqkaQQKSRQYDYVEVMACPGGCINGG 456
                  **********************************99899999****************9 PP

>> DUF3677  Protein of unknown function (DUF3677)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.21   1.2e+03      59      71 ..     419     431 ..     392     440 .. 0.82
   2 ?   10.2   0.0   0.00012      0.71      14      36 ..     490     512 ..     482     517 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.21
     DUF3677  59 srLlklrlKtkal 71 
                 + Llk+r+Kt a 
  EPX70852.1 419 QVLLKRRMKTDAQ 431
                 6799999999875 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00012
     DUF3677  14 vrllaasrleiwlqnpKLsreaq 36 
                 +r+++ + le w+q pKL+r+  
  EPX70852.1 490 DRSFVNKTLEHWIQDPKLVRHYL 512
                 689****************9865 PP

>> EF-hand_8  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1       1.1   6.5e+03      46      54 ..     160     168 ..     160     169 .. 0.84
   2 ?    9.9   0.1   0.00011      0.63       7      38 ..     278     308 ..     277     314 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.1
   EF-hand_8  46 eEFcvller 54 
                 eEFc+ ++ 
  EPX70852.1 160 EEFCESWKQ 168
                 7****9986 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00011
   EF-hand_8   7 reelrrilrilglkk...glseeevdilfrefDtd 38 
                 ree+++     g ++    l+++e+ ++f++fD+d
  EPX70852.1 278 REEFSED----GVRDvdaVLTPKEIVEMFKHFDLD 308
                 6666662....333344459*************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (533 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       900  (0.050198); expected 358.6 (0.02)
Passed bias filter:                      673  (0.037537); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.71u 0.36s 00:00:01.06 Elapsed: 00:00:00.53
# Mc/sec: 3018.80
//
Query:       EPX70853.1  [L=1156]
Description: AGC protein kinase Cek1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.4e-58  196.2   0.0      2e-36  125.7   0.0    2.3  2  Pkinase         Protein kinase domain
    8.3e-27   94.1   0.0    2.1e-21   76.4   0.0    2.3  2  Pkinase_Tyr     Protein tyrosine kinase
    9.8e-06   25.1   0.0     0.0018   17.6   0.0    2.4  2  Kinase-like     Kinase-like
     0.0015   17.5   0.0     0.0044   16.0   0.0    1.7  1  Haspin_kinase   Haspin like kinase domain
     0.0039   16.0   0.2      0.011   14.6   0.0    1.8  2  Pkinase_fungal  Fungal protein kinase
     0.0093   15.1   0.2        4.1    6.4   0.0    2.4  2  Seadorna_VP7    Seadornavirus VP7
  ------ inclusion threshold ------
      0.016   15.1   0.0       0.31   10.9   0.0    2.2  2  APH             Phosphotransferase enzyme family
      0.021   15.1   0.0      0.053   13.8   0.0    1.6  1  PAS_4           PAS fold
       0.15   12.1   0.0       0.31   11.1   0.0    1.4  1  PAS             PAS fold


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.7   0.0     1e-39     2e-36       1     149 [.     599     749 ..     599     765 .. 0.93
   2 !   68.1   0.0   3.8e-22   7.6e-19     149     264 .]     860     969 ..     852     969 .. 0.88

  Alignments for each domain:
  == domain 1  score: 125.7 bits;  conditional E-value: 1e-39
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHS.CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--H CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklk.hpnivrlyevfeekdelylvleyveggeladllerkgslse 97 
                 y+ l+ + +G+fG+Vy a +++tg+ +AvK++kk+++  k++  +v++E +il      p++ +ly++f++ d+lylv+ey++gg+  +ll++ g+l+ 
  EPX70853.1 599 YKILKPISKGAFGSVYLAQKRTTGDYFAVKILKKSDMIAKNQvVNVRSERAILMAQGeIPFVAKLYYTFQSRDYLYLVMEYLNGGDCGSLLKTMGILEL 697
                 67789999*****************************9999999*******9877766***************************************** PP

                 HHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESS CS
     Pkinase  98 eeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakele 149
                 + + k++++i+  l  lHs++i+HrD+Kp+N+Li ++g+lK+tDFGl++   
  EPX70853.1 698 DWIHKYLAEIVLCLGALHSREIVHRDIKPDNLLIAQSGHLKLTDFGLSRVGY 749
                 ************************************************9755 PP

  == domain 2  score: 68.1 bits;  conditional E-value: 3.8e-22
                 SSSCSBCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-H..HHHHHHHHHT CS
     Pkinase 149 essskltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseise..eakdllkkll 245
                 e++ +++ f+gt++Y+APEv+ +n+  k++D+Ws+G++l+e+l+g ppf++e+ +e ++++l +           k ++pe++++ e  +a dl+++ll
  EPX70853.1 860 ENRDSFKRFIGTPDYIAPEVILGNPGIKASDWWSVGCVLFEFLFGYPPFNAETPTEIFKNILAR-----------KIAWPENTDFRElgNAVDLINRLL 947
                 5666799*******************************************99998877777777...........6788888888543389******** PP

                 -SSGCCSTT...HHHHHTSGGG CS
     Pkinase 246 kkdpkkRlt...aeellqhpyl 264
                 +++p++Rl+   ++e+++hp++
  EPX70853.1 948 CMEPSERLGakgVDEVKSHPFF 969
                 *********6777899999998 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.4   0.0     1e-24   2.1e-21       3     165 ..     601     760 ..     599     786 .. 0.86
   2 !   15.3   0.0   4.5e-06    0.0089     170     221 ..     873     923 ..     861     957 .. 0.84

  Alignments for each domain:
  == domain 1  score: 76.4 bits;  conditional E-value: 1e-24
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSS..HHHHHHHHHHHHHHHTS.-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeat..eeekeelleeakimkkl.khpnivkllgvctkeepllivteyvkgGdLlkfLrkkek 97 
                  + k + +GafG+V+ ++ +    ++    avK+lk++ +  +++  ++ +e +i+++  + p + kl+    +++ l++v+ey++gGd  + L++   
   EPX70853.1 601 ILKPISKGAFGSVYLAQKR----TTGDYFAVKILKKSDMiaKNQVVNVRSERAILMAQgEIPFVAKLYYTFQSRDYLYLVMEYLNGGDCGSLLKTM-- 692
                  67899***********999....77888999*998765511445678888988877766***********************************98.. PP

                  TTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSS CS
  Pkinase_Tyr  98 ekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeea 165
                    l+l+++ ++ +++   +  L+s+++vHrd+   N L++++ + k++DfGL+r  + + + ++++e+
   EPX70853.1 693 GILELDWIHKYLAEIVLCLGALHSREIVHRDIKPDNLLIAQSGHLKLTDFGLSRVGYLKRKNRNDSES 760
                  9*****************************************************99777766555544 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 4.5e-06
                  GGS-HHHHHHSEEEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHHHTT CS
  Pkinase_Tyr 170 kWmapEslkekkftsksDvWsfGvllwEiftlgespypglkneevleklkeg 221
                   ++apE++  +   ++sD Ws G +l+E +  g  p++  +++e+++++ ++
   EPX70853.1 873 DYIAPEVILGNPGIKASDWWSVGCVLFEFLF-GYPPFNAETPTEIFKNILAR 923
                  699*************************987.*******9999999988544 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.7   0.0    0.0081        16      17      66 ..     602     651 ..     595     673 .. 0.81
   2 !   17.6   0.0   9.1e-07    0.0018     153     209 ..     707     764 ..     696     766 .. 0.77

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.0081
  Kinase-like  17 gellkkgdrsvvfevkdqetgeplavkvfllpseaskkdlerlkeqelai 66 
                   +++ kg ++ v++++   tg+++avk+    +  +k+++ +++ +   +
   EPX70853.1 602 LKPISKGAFGSVYLAQKRTTGDYFAVKILKKSDMIAKNQVVNVRSERAIL 651
                  57999***********************9999999999999998776444 PP

  == domain 2  score: 17.6 bits;  conditional E-value: 9.1e-07
  Kinase-like 153 lirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvl..sevekgfaP 209
                  ++     L+++ +vh ++++dnll  + g l+l++f+ L r+g   +   +  e +faP
   EPX70853.1 707 IVLCLGALHSREIVHRDIKPDNLLIAQSGHLKLTDFG-LSRVGYLKRKnrNDSESSFAP 764
                  5555678*****************************7.777765444312666677877 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   2.2e-06    0.0044     104     257 ..     594     748 ..     525     760 .. 0.77

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 2.2e-06
  Haspin_kinase 104 sllnd.......seklssevyqtke..kdkevvlKviplevledvtis.kelslkelkslklvkgtypglllllqdkvlkekpdfyseqqlflvll 189
                    +++nd       s++ ++ vy +++  + +  ++K++     +d++ + +++ +   + + + +g    ++++++ +++ ++      + l+lv++
     EPX70853.1 594 PSINDykilkpiSKGAFGSVYLAQKrtTGDYFAVKILKK---SDMIAKnQVVNVRSERAILMAQGE---IPFVAKLYYTFQS-----RDYLYLVME 678
                    555555666666788888888888855556667776644...455444377788777777777777...8899999998888.....555555555 PP

  Haspin_kinase 190 lk...dkGtdLeevklkswkqalsifwqivkiLyvaEtkfeFEHRdLhldniLvdknlnvtlidlklsRle 257
                         d G+ L+++ + + + + + + +iv  L +  ++ e  HRd++ dn L+ ++++  l d+ lsR+ 
     EPX70853.1 679 YLnggDCGSLLKTMGILELDWIHKYLAEIVLCLGALHSR-EIVHRDIKPDNLLIAQSGHLKLTDFGLSRVG 748
                    441223467799999999999999999999999888766.999**************************97 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   5.4e-06     0.011     312     380 ..     704     874 ..     638     888 .. 0.75
   2 ?   -2.2   0.2      0.67   1.3e+03     189     242 ..    1065    1119 ..    1062    1152 .. 0.64

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 5.4e-06
  Pkinase_fungal 312 lrDaIkghrsLflkagiLHrDiSenNilit........................dskke.....gerkglLiDLDlakelsddssesgare.... 373
                     l++ +  +  L+   +i+HrDi  +N+li                         ds++      g++ g L+DL l ++ s  + +s+a e    
      EPX70853.1 704 LAEIVLCLGALH-SREIVHRDIKPDNLLIAqsghlkltdfglsrvgylkrknrnDSESSfapnlGDCPGSLSDLSLSTTSSYMDVNSAAAEdppe 797
                     667777888999.9****************9999999999999999999887764444488889***********99988866555544333444 PP

  Pkinase_fungal 374 ......................................................................rtGTleF 380
                                                                                            +GT+ +
      EPX70853.1 798 rptlnerllsldgtsirlasqsfslengpedlllagrkshntnnndktraqvtdspkiqpflenrdsfkrFIGTPDY 874
                     55555555555555555555555555555555555555555555555555555555555555555555555555555 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.67
  Pkinase_fungal  189 elLkkaeergvegvarlvahedveekdddiaeiRkgldvtka.ekfrskrkvvss 242 
                      e+L ka+++ ++ + +   +++++++ +d ++   +l+ ++   +f s+r++  +
      EPX70853.1 1065 EILDKANRHTIQKLRKEHESQTLKDQIEDNNDYLVNLNNRRTpDSFLSTRTSRRA 1119
                      7999999999999999888888885555554444444444444666666654433 PP

>> Seadorna_VP7  Seadornavirus VP7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.2   0.1    0.0023       4.7     113     158 ..     385     429 ..     373     438 .. 0.87
   2 !    6.4   0.0     0.002       4.1     154     186 ..     711     741 ..     700     754 .. 0.87

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0023
  Seadorna_VP7 113 arvyGivkLknDnnyeyGiilekCykirvltvniivaglkdLmdfh 158
                    +v+Gi +Lkn   y+  i le  y+++ +  n++   l++L+++ 
    EPX70853.1 385 TKVFGITRLKNAVYYSERIRLEVDYHVQEVIDNVVSE-LSSLQNLN 429
                   58***************************99999887.99998765 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.002
  Seadorna_VP7 154 LmdfhsestnllhGDcnpenlmcDknGylklvD 186
                   L  +h  s +++h D++p+nl+  + G lkl D
    EPX70853.1 711 LGALH--SREIVHRDIKPDNLLIAQSGHLKLTD 741
                   45567..7889********************99 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0     0.089   1.8e+02       3      84 ..     603     687 ..     602     716 .. 0.64
   2 ?   10.9   0.0   0.00016      0.31     165     199 ..     716     748 ..     696     750 .. 0.77

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.089
                 EEE--.SSCEEEEEEETT.--EE.EEEE-TT..S-HHHHHHHHHHHHHHHHTT-..B--B-CTTBS-EEETTEEEEEEE----EE-SS CS
         APH   3 relsggasnrtylvttpa.gryv.lrrnppa..raaeeirrevallrlLakagv..pvPevlagdtddeeigllfalieyvpgrsllr 84 
                 +++s ga   +yl +  + g+y+ +++  ++   a++++ +   + + L ++g    v+++++     + + +l++++ey+ g +   
  EPX70853.1 603 KPISKGAFGSVYLAQKRTtGDYFaVKILKKSdmIAKNQVVNVRSERAILMAQGEipFVAKLYY---TFQSRDYLYLVMEYLNGGDCGS 687
                 677778777888888888776665777555556455555544444444444444444889999...6777778999****99988776 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00016
                 -EEEE-SS-SGGGEEEC..TTEEEEE---TT-EEE CS
         APH 165 ptvllHgDlhpgNllvdpddgrvtGviDfedaglg 199
                 ++ ++H+D++p+Nll+ +  g++  + Df+++++g
  EPX70853.1 716 SREIVHRDIKPDNLLIAQS-GHL-KLTDFGLSRVG 748
                 6789*************44.444.48999999988 PP

>> PAS_4  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   2.7e-05     0.053      10      74 ..      47     110 ..      40     127 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 2.7e-05
       PAS_4  10 vldpdgrvlyaNaaaaelfgappeellGktlaellpeedaarleralrrvlegeepiefleelll 74 
                  ld  g+++y+++++ +l+ ap+++++G+++ ++l +   ++++ a r +le + +++ ++ l++
  EPX70853.1  47 ELDLSGNFQYVSENSSDLLNAPQDQVVGHSVKDFLGKTGLDAFAKAARCLLEND-SHSYHIRLKH 110
                 57999********************************99999999999999985.4444444444 PP

>> PAS  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00015      0.31      13      70 ..      44     101 ..      38     132 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00015
                 EEEEEETTSBEEEECHHHHHHHSSTHHHCTTSBGGGGBSTTHHHHHHHHHHHHHHHTT CS
         PAS  13 pifvvDedgrilyvNaaaeellGlsreevlgkslldliheeddaelaelleqlleqge 70 
                   f +D +g++ yv+++  +ll+ ++++v+g s+ d++  +  + +a++ ++lle+ +
  EPX70853.1  44 VSFELDLSGNFQYVSENSSDLLNAPQDQVVGHSVKDFLGKTGLDAFAKAARCLLENDS 101
                 56899*******************************9977755566666666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1156 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       483  (0.0269396); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.94u 0.36s 00:00:01.29 Elapsed: 00:00:00.57
# Mc/sec: 6119.11
//
Query:       EPX70854.1  [L=858]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.1e-105  353.4   6.0   1.1e-105  353.4   6.0    1.6  2  DUF3818   Domain of unknown function in PX-proteins (DUF3818)
    5.6e-24   84.6   0.2    1.4e-23   83.3   0.2    1.6  1  PXB       PX-associated
    5.6e-15   55.3   0.1    1.8e-14   53.7   0.1    1.9  1  PX        PX domain


Domain annotation for each model (and alignments):
>> DUF3818  Domain of unknown function in PX-proteins (DUF3818)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  353.4   6.0  1.9e-109  1.1e-105       1     338 [.     363     699 ..     363     700 .. 0.96
   2 ?   -3.6   0.1      0.74   4.4e+03      13      29 ..     718     734 ..     716     739 .. 0.87

  Alignments for each domain:
  == domain 1  score: 353.4 bits;  conditional E-value: 1.9e-109
     DUF3818   1 gLsklfeeikekesieelspelkkliewarielAstlyqvFvgsdnsselfaqlkrlhklmPYfllkqiLritNpmaimkglldLfLaqPfggrsLlqr 99 
                 gL++lf+e+keke+i++lsp l++++ew+r++lAst+y+vF+++++s  +f+q+kr+h+++PY ++k+i+r++Np+++mk++ld +LaqPfg +sL+qr
  EPX70854.1 363 GLTSLFKELKEKERIKDLSPTLQQTLEWVRVNLASTIYDVFIAKEKSGVTFSQIKRMHSIFPYGVIKNIMRFSNPLSVMKRILDTLLAQPFGMKSLFQR 461
                 89************************************************************************************************* PP

     DUF3818 100 ifstilnedlkelekeikelekkidkseelieklkkfveas.eeeqeeireeseeekldllvvilrseel.pklskeqleeviesykaykeakkeeksa 196
                 ++s++ln+++++++k i +++++++ ++e+++k+++ ve++ +  q+ +re+   + +d l  il s+e  pkls+e++ +vi   +a+kea+ +e   
  EPX70854.1 462 LLSVSLNDNVRAIHKLISKYQSQVN-NAEVLQKIQQQVENPcKAAQDVLRENN-LSPQDYLQYILVSDEVpPKLSEESIRQVIMDGSAWKEAMGSEGYP 558
                 *************************.***************555566666555.66678999999999998**************************** PP

     DUF3818 197 sekeenedaelfedlkellklylrerDkellikllqepelsellkdiitifyeplvrvykaanisdalkdfqkFlndliklveklkneeqesdpanvvq 295
                 ++k+ +++a+ f  + +l++ly+++ +k+  i+l++e+++ e++k i+ ify+pl++vykaan++ +++df++F++d+++lve+++++  e +p++ v+
  EPX70854.1 559 EDKTIQDRARRFGFTLKLMHLYAKQFNKKRSISLISEGSTGEMMKTIVVIFYKPLMKVYKAANVYTSVGDFEAFMDDMLRLVEETQENL-EVNPTTLVE 656
                 ***********************************************************************************666665.7******** PP

     DUF3818 296 afidLvdrhedsfykFvhevyvkdeelfdelikWiekilkflr 338
                  +idLv+rhed+fy+Fvh+vy +d++lf++l++Wie+i++fl+
  EPX70854.1 657 HYIDLVKRHEDAFYDFVHRVYLHDSGLFSSLMEWIESIISFLH 699
                 *****************************************96 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 0.74
     DUF3818  13 esieelspelkkliewa 29 
                 e+i+ ls+elk+l+ew 
  EPX70854.1 718 EEIDLLSQELKELVEWN 734
                 678999*********95 PP

>> PXB  PX-associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.3   0.2   2.3e-27   1.4e-23       7     129 ..      11     131 ..       6     132 .. 0.92

  Alignments for each domain:
  == domain 1  score: 83.3 bits;  conditional E-value: 2.3e-27
         PXB   7 plqehyLkkiLihlelykElealkdpdalsklGyPFkseekekkekkeaesselPllrfllrefvltfPfl.kalpkefWqdkvqpfleslaeanlSes 104
                 +l++hyLkk+L++l +++El+ + +p++l +lG+PF ++ +      + e+s++P+lrf++++fvltfPfl  + ++++W++ +++fl+ + e+++S  
  EPX70854.1  11 ALERHYLKKELLSLLVEDELKFIGNPSNLVHLGTPFVNKGEP---PIAFEESKIPILRFIFKKFVLTFPFLdPESQTQLWNVSFRNFLSVIYENSISVL 106
                 789**********************************96532...2225678*******************9999************************ PP

         PXB 105 ydkgeltkrkklatklskllellvr 129
                  d+ ++t  +++  k++ +l+ll++
  EPX70854.1 107 PDDPDATYMHRMELKFHGMLTLLMS 131
                 *********************9985 PP

>> PX  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.7   0.1     3e-18   1.8e-14      15     112 ..     187     306 ..     171     307 .. 0.88

  Alignments for each domain:
  == domain 1  score: 53.7 bits;  conditional E-value: 3e-18
                 TTSSEEEEEEEEEETTSSSEEEEEEEHHHHHHHHHHHHHHHTTSTSTSSSTSGSSSSS........................CTTSHHHHHHHHHHHHH CS
          PX  15 gskkhsyylyevelktgakewtvkRrYsdFeeLhskLlrkfprvkiPplPkkvlfgsv........................rkkdeefiekrrkgLee 89 
                 ++kk++ y+ +v++++  +   v RrYsdF +Lh+ L +k+p+  i  lP k+l+++                         +       e+ r gL+ 
  EPX70854.1 187 RNKKTYEYILKVQNEE--SLIYVARRYSDFTKLHHALVKKYPSAAIARLPAKDLHDTHlqdgsqfstlgttqtstsvgstpeNPGLVLRQERMRIGLNY 283
                 5677777777777776..69************************************99*********************987666677889999***** PP

                 HHHHHHTSCHHHHSHHHHHHHHS CS
          PX  90 yLqrllnhpelrnsevlteFLev 112
                 y++++l++ el ns+++  FL +
  EPX70854.1 284 YINHILKQDELLNSPEVEAFLYS 306
                 ********************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (858 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1144  (0.0638072); expected 358.6 (0.02)
Passed bias filter:                      651  (0.0363099); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.88u 0.37s 00:00:01.25 Elapsed: 00:00:00.55
# Mc/sec: 4704.26
//
Query:       EPX70855.1  [L=207]
Description: riboflavin synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.6e-45  152.3   1.0    8.9e-22   76.9   0.3    2.1  2  Lum_binding     Lumazine binding domain
     0.0023   18.2   0.0     0.0048   17.1   0.0    1.5  1  Ribosomal_L21p  Ribosomal prokaryotic L21 protein


Domain annotation for each model (and alignments):
>> Lum_binding  Lumazine binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.9   0.3   9.9e-26   8.9e-22       1      87 []       3      86 ..       3      86 .. 0.86
   2 !   74.5   0.0   5.7e-25   5.1e-21       1      87 []      99     184 ..      99     184 .. 0.96

  Alignments for each domain:
  == domain 1  score: 76.9 bits;  conditional E-value: 9.9e-26
                 -S--SEEEEEEEEE.ECGCTTEETEES..GGGGG..TTT-EEEETTEEEEEEEEEE.SSEEEEEEEHHHHHHSSGGG--TTSEEEEEEE CS
  Lum_binding  1 tGiVeevgtvesiekeekledltielp..elakylvekGdsiavnGvcLTVvteeveeeeftvdvipeTlerttlgelkvgdkVNlEra 87
                 tG++e++g v+++ k+  +e +++ ++  ++ k  ++ GdsiavnG+cLTV+  +++++ f v ++peTl+ t+lg+l++gd+VNlEra
   EPX70855.1  3 TGLIEATGVVRRVVKS--SEGFSVGIEepKIIKD-CNLGDSIAVNGTCLTVT--DLNDSGFMVGIAPETLRLTNLGSLTEGDSVNLERA 86
                 8************755..4555555554355444.488*************9..899******************************96 PP

  == domain 2  score: 74.5 bits;  conditional E-value: 5.7e-25
                  -S--SEEEEEEEEE.ECGCTTEETEES..GGGGG..TTT-EEEETTEEEEEEEEEE.SSEEEEEEEHHHHHHSSGGG--TTSEEEEEEE CS
  Lum_binding   1 tGiVeevgtvesiekeekledltielp..elakylvekGdsiavnGvcLTVvteeveeeeftvdvipeTlerttlgelkvgdkVNlEra 87 
                  +G+V++v+++++ ++++++  +t++ +  ++ ky+v kG +ia++Gv+LTV+  +v+e++f++++i++T++ + + ++k+gd VN+E++
   EPX70855.1  99 QGHVDTVAEIVEKKPDQEAIVFTFRPRdpSVLKYIVYKG-YIALDGVSLTVT--HVDERTFSIMMIAYTQSCVIMPTKKIGDLVNVEVD 184
                  8************9999999999987799**********.***********9..89*******************************97 PP

>> Ribosomal_L21p  Ribosomal prokaryotic L21 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   5.4e-07    0.0048      20      83 ..      67     128 ..      62     142 .. 0.86

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 5.4e-07
                     EEEESS.SSSTTCEEEESSEEE....EE.ECTSSSESS.TCEEEEEEEEEE---EEEEEEETTTTE CS
  Ribosomal_L21p  20 lkvekl.eaevgdkveldkVllvgskddvkvGaplveg.akVeaevvehgkgkkiivfkkkrrkny 83 
                     l++ +l + ++gd+v+l++ +l    +++ +G  +v+g +   ae+ve++ +++ ivf +++r  +
      EPX70855.1  67 LRLTNLgSLTEGDSVNLERAVL----STTRMGGHFVQGhVDTVAEIVEKKPDQEAIVFTFRPRDPS 128
                     66666767789***********....899*******9878999*******************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       578  (0.0322383); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.47
# Mc/sec: 1322.70
//
Query:       EPX70856.1  [L=563]
Description: ER oxidoreductin Ero1b [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.8e-117  391.9   0.8   3.5e-117  391.6   0.8    1.1  1  ERO1      Endoplasmic Reticulum Oxidoreductin 1 (ERO1)


Domain annotation for each model (and alignments):
>> ERO1  Endoplasmic Reticulum Oxidoreductin 1 (ERO1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  391.6   0.8    2e-121  3.5e-117       2     354 .]      63     455 ..      62     455 .. 0.88

  Alignments for each domain:
  == domain 1  score: 391.6 bits;  conditional E-value: 2e-121
        ERO1   2 lrplLkeLvk.tdfFryfkvnld.keCpfweddeglCanraCaveeceeeeiPekwraeelsklertls..................eeeesavkeake 80 
                 l plLk+L++ +d++r++++nl+ keC++  dd+ +C+++aC+v  ++e+++Pe w++++l+kle  +                   + ++s++ e   
  EPX70856.1  63 LSPLLKDLTEkSDYMRFYRLNLFnKECKYKMDDNVFCGSNACNVLVTDENNVPEIWSSKALGKLEGFMPelsrqivesdqsvmenveKISQSCLLER-- 159
                 5799*****989**********99***********************************99999999996666666665444443222222222222.. PP

        ERO1  81 eeeaeeedyceledeeeeeavyvdLlenperfTgYkGesaervWkaiYeencfkeeseseese......................ekeleelclekrvf 157
                   + ++++yc++++e ++ +vyv+Ll+nperfTgY  ++a+r+W++iY+e c+ ++ e   +                       ++++e    e+rvf
  EPX70856.1 160 -LDDQDRQYCYVDNELDSGCVYVSLLDNPERFTGYGAPHATRIWEMIYNE-CLPDTFE--PTVdfptlftqgslapssisqeqvlKERMELWTHEQRVF 254
                 .2223447****************************************88.7755433..22235788899999999999999999999999******* PP

        ERO1 158 yrliSGlhasisihlaaeylnqetgewepnlelfkervgkhperlenlYfnyalvlrAvaklapyleelefstgeeeedeetkellkeelakellsals 256
                 yr++SG+h+sis+hl+++ylnq+tg w+pn+++fke+v +hper+enlYf+y l+lrA+ kl+ +l++l+f+++++ +d+e+++++++ +     ++++
  EPX70856.1 255 YRVLSGMHTSISTHLCYNYLNQSTGVWGPNINCFKEKVLSHPERIENLYFAYSLLLRAMDKLNGHLDALTFCHDSALQDTEVRHKVRDLV-----DTVN 348
                 ************************************************************************************966655.....5566 PP

        ERO1 257 skekafdesklfk.dkeeaeelkeefrerfrnisrimdCVgCekCrLwGKlqttGlgtAlkilfeeeekeeek........klkLernevvALintler 346
                 + ++ fdes lf+ + e ++++k+efre+fr +s++mdCVgCe+CrLwGK+qt+G+gtAlkilfe ++ e+e         +l+L+r+e+vAL+nt++r
  EPX70856.1 349 QYPRYFDESVLFSgEPELSSAMKKEFREHFRTVSALMDCVGCERCRLWGKIQTNGFGTALKILFEVSDVENEIdqfestsfPLQLRRSEIVALVNTFDR 447
                 7789*********77788999*********************************************998766589************************ PP

        ERO1 347 lseSieav 354
                 ls+Si+++
  EPX70856.1 448 LSRSIDYI 455
                 *****976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (563 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       543  (0.0302861); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 3801.99
//
Query:       EPX70857.1  [L=494]
Description: pig-F [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.3e-40  138.2  10.6    5.7e-40  137.4  10.6    1.5  1  PIG-F            GPI biosynthesis protein family Pig-F
    1.8e-26   92.8   0.0    2.5e-26   92.3   0.0    1.2  1  adh_short        short chain dehydrogenase
      5e-12   45.9   0.0    7.1e-12   45.4   0.0    1.1  1  adh_short_C2     Enoyl-(Acyl carrier protein) reductase
    5.2e-08   33.0   0.0    8.7e-08   32.3   0.0    1.3  1  KR               KR domain
     0.0018   17.7   0.0     0.0071   15.8   0.0    1.8  1  Epimerase        NAD dependent epimerase/dehydratase family
     0.0035   16.8   0.0     0.0061   16.0   0.0    1.3  1  DUF1776          Fungal family of unknown function (DUF1776)
     0.0041   16.8   0.0      0.009   15.8   0.0    1.5  1  Eno-Rase_NADH_b  NAD(P)H binding domain of trans-2-enoyl-CoA 
  ------ inclusion threshold ------
      0.076   12.4   0.0       0.11   11.9   0.0    1.2  1  GDP_Man_Dehyd    GDP-mannose 4,6 dehydratase


Domain annotation for each model (and alignments):
>> PIG-F  GPI biosynthesis protein family Pig-F
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.4  10.6   2.5e-43   5.7e-40       4     179 ..     319     490 ..     267     491 .. 0.92

  Alignments for each domain:
  == domain 1  score: 137.4 bits;  conditional E-value: 2.5e-43
       PIG-F   4 alllallalrfsalvadpvstLlsslivlallqvlyvvlclekkkkkskkskivlallsllltlllatlllaillvlfGApllthlleTlllalhlsll 102
                 +++++++++ +  lva+p+ tLls+l++++llq++ ++++       +   ++++++ s++ t+l +++l+a++l  fGApl+++++ ++l+a++ls+l
  EPX70857.1 319 CIQFCIFYYLIPPLVANPYGTLLSTLPLWFLLQTIQTYFQR-----PRGYFTFASIFRSICATSL-GSVLIAFILFTFGAPLVNNFQLSFLCAATLSVL 411
                 5677899999999**************************99.....3445555555555555555.********************************* PP

       PIG-F 103 tvlpllyvlgvdaeawkevvsle..epldevlggllgtvvGaWlGavPiPLDWdrpWQkwPitilvGaylGyvvgslig 179
                 +++pl+++++++++ w ++++++  ++l ++   + g ++GaW Ga+PiPLDWd+pWQ+wPit++vGa++G+++++++g
  EPX70857.1 412 IIYPLTFFFQSNYTSWGQFLAFKqyKTLGSLQCRAWGPILGAWAGAIPIPLDWDQPWQAWPITVVVGAFIGHLIATIFG 490
                 *********************997778888999999**************************************99876 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.3   0.0   1.1e-29   2.5e-26       1     188 [.      14     205 ..      14     211 .. 0.92

  Alignments for each domain:
  == domain 1  score: 92.3 bits;  conditional E-value: 1.1e-29
                 SEEEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHT....TSEEEEEE-TTTSHHHHHHHHHHHHHHHSSESEEEE---SS--SSGGG CS
   adh_short   1 kvvlvtGassGIGraiakelakeGakvvvvdrseekleevakelkee....gakalaiqvDvtdreevealvekavkklgkldvLvnNAGitgsgpfse 95 
                 k vlvtG+s+G+G+a+ak+++ +G +v++++r+e+kl+ +++el ++     + + + +vD+t++++v+ ++++ +      d L ++AG + +g f +
  EPX70857.1  14 KNVLVTGGSQGFGLALAKKFVLRGSHVTIAARTESKLKVAVEELSKLkihdDQIIQYRSVDLTNYDDVKIMIDQLE---PCPDHLAHCAGSSYPGFFVD 109
                 78*******************************************99886444488999************99994...44599*************** PP

                 CSHHHHHHHHHHHTHHHHHHHHHHHHHHH...HCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHHHH CS
   adh_short  96 lseeewervievNltgvflltravlpaml...kqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdmak 188
                 l    +e+ +  N+ + + +t+a+++ m+      s rI  +sS+ +  p+ g+ aYs +Kaav++l++ l++e   +gi+v++  P+ + ++  +
  EPX70857.1 110 LHPVVFENQMRQNYLASVYITHALIKRMKdisVPYSRRIMLTSSILSALPLVGYNAYSPTKAAVRALADGLRQECILYGIEVSIFLPATILSPGYE 205
                 *****************************776566789*************************************************999877655 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.4   0.0   3.2e-15   7.1e-12       3     175 ..      22     200 ..      20     227 .. 0.89

  Alignments for each domain:
  == domain 1  score: 45.4 bits;  conditional E-value: 3.2e-15
                   TTSHHHHHHHHHHHTT-EEEEEESSGGH.HHHHHHHHHH.TTSE.E...EE--TTSHHHHHHHHHHHHHHHSSEEEEEE-----EGCSS-GGGH-HH CS
  adh_short_C2   3 asgIGraiAkalaeeGaevvltdlneea.kkrveelaee.lgae.v...lecDVtdeeqvealveevvekfgklDilvnnagiapklkgpfletsre 93 
                    +g G a+Ak++  +G +v ++ + e++ k +veel +  +  + +     +D t+ ++v+ ++++++      D l ++ag + +  g f+++   
    EPX70857.1  22 SQGFGLALAKKFVLRGSHVTIAARTESKlKVAVEELSKLkIHDDqIiqyRSVDLTNYDDVKIMIDQLEPC---PDHLAHCAGSSYP--GFFVDLHPV 113
                   589*************************99999999884133335447799***************9965...799**********..********* PP

                   HHHHHHHHHTHHHHHHHHHHHHHCTSC.....CEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BH CS
  adh_short_C2  94 efdraldvnlyslfllakaalplmkeg.....gsivnlssvgaervvpnynaygaaKaalealtrylAvelgpkgiRvNavspgpik 175
                    f++ +  n  + +++++a+++ mk+       +i+ +ss+ +   + +ynay+ +Kaa+ al+  l  e+  +gi v    p  i 
    EPX70857.1 114 VFENQMRQNYLASVYITHALIKRMKDIsvpysRRIMLTSSILSALPLVGYNAYSPTKAAVRALADGLRQECILYGIEVSIFLPATIL 200
                   **********************9998778887889999**************************99999999999999887777765 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.3   0.0   3.9e-11   8.7e-08       3     165 ..      16     182 ..      15     193 .. 0.81

  Alignments for each domain:
  == domain 1  score: 32.3 bits;  conditional E-value: 3.9e-11
                 EEEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHT.T-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE---------TTT- CS
          KR   3 ylitGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaeleal.gaevevvaaDvsdkdavealleeikaeeppikGvihaAgvlrdklleem 100
                 +l+tGG  g+Gl+la+  + +g +h+ + +R++++ + + +++++l+ + +  ++++++D+++ d+v+ ++++++   p      h+Ag +  + + ++
  EPX70857.1  16 VLVTGGSQGFGLALAKKFVLRG-SHVTIAARTESKLKVAVEELSKLKIHdDQIIQYRSVDLTNYDDVKIMIDQLE---PCPDHLAHCAGSSYPGFFVDL 110
                 69*******************9.58999999988888989999999988566789*******************9...5568899************99 PP

                 -HHHHHHHHTTTTHHHHHHHHHTTT.......S--SEEEEEEEHHHHH--TT-HHHHHHHHHHHHHHHHHHH CS
          KR 101 taedleqvlapKvkGawnLhelled.......esldffvlfSSiagllgsagqanYaaaNaflDalaeyrrs 165
                     +e+ ++    ++  + ++l +            ++l+SSi + l   g  +Y+ + a + ala+  r+
  EPX70857.1 111 HPVVFENQMRQNYLASVYITHALIKrmkdisvPYSRRIMLTSSILSALPLVGYNAYSPTKAAVRALADGLRQ 182
                 97666666665555555555555542211332223458899********************99999987766 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   3.2e-06    0.0071       1      89 [.      16     116 ..      16     234 .. 0.67

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 3.2e-06
                 EEEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC..........EEEE--TT-HHHHHHHHHHH..T-SEEEE--S---HHHHHHSHHHH CS
   Epimerase   1 ilVtGatGfiGsalvkallekgyevigldrlssasntarledl..........elveldltdrsalerlfkee..qpdavihlAavggvaassedpadf 87 
                 +lVtG++   G al+k++  +g +v+  +r +s+ + a +e            +   +dlt+ ++++ ++++    pd+  h+A+ + ++  ++    +
  EPX70857.1  16 VLVTGGSQGFGLALAKKFVLRGSHVTIAARTESKLKVAVEELSklkihddqiiQYRSVDLTNYDDVKIMIDQLepCPDHLAHCAGSSYPGFFVDLHPVV 114
                 79********************88888888866666665554477*******9999***************997889******9988877655554444 PP

                 HH CS
   Epimerase  88 ie 89 
                 +e
  EPX70857.1 115 FE 116
                 44 PP

>> DUF1776  Fungal family of unknown function (DUF1776)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   2.7e-06    0.0061     109     193 ..     108     192 ..     100     195 .. 0.93

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 2.7e-06
     DUF1776 109 etiplsswaselnerllspiltlqallplltsrakqkakiivvnpsissslnlpfhapEalvssalsalfevLkrelrphnidvt 193
                   +++  +++++ ++ l+++ ++ al++ ++  +   ++ i+++ si+s+l l+ +   + +  a++al+  L++e+  ++i+v+
  EPX70857.1 108 VDLHPVVFENQMRQNYLASVYITHALIKRMKDISVPYSRRIMLTSSILSALPLVGYNAYSPTKAAVRALADGLRQECILYGIEVS 192
                 56788899**********************************************************************9999885 PP

>> Eno-Rase_NADH_b  NAD(P)H binding domain of trans-2-enoyl-CoA reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0     4e-06     0.009      37      56 ..      10      29 ..       5      48 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 4e-06
                     --.-SEEEEESTSSHHHHHH CS
  Eno-Rase_NADH_b 37 ekgpkkvLviGaStGYGLAs 56
                     e+  k+vLv G+S+G+GLA 
       EPX70857.1 10 ETDRKNVLVTGGSQGFGLAL 29
                     4567**************95 PP

>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   4.9e-05      0.11       1      86 [.      17     102 ..      17     110 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 4.9e-05
                    EEETTTSHHHHHHHHHHHHCT-CCEEEEEEESS-TTHHHHHCTTT...TTGCCEEEEE--TT-HHHHHHHHHHHT..-SEEEE--S-- CS
  GDP_Man_Dehyd   1 LiTGiaGfiGsylaelLlekgyevhgivrrsssfntgriehlakdpkeeleenlklhkgDltDssslerllaevq..pdevynLAAqs 86 
                    L+TG++   G  la++++ +g +v++  r +s++++  +e+l k  k + ++ ++  ++Dlt+ + ++ ++++ +  pd   + A+ s
     EPX70857.1  17 LVTGGSQGFGLALAKKFVLRGSHVTIAARTESKLKV-AVEELSKL-KIHDDQIIQYRSVDLTNYDDVKIMIDQLEpcPDHLAHCAGSS 102
                    89*998667***************999888888774.57777654.4688899*******************9972257777777666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (494 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       818  (0.0456244); expected 358.6 (0.02)
Passed bias filter:                      544  (0.0303419); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.59u 0.29s 00:00:00.87 Elapsed: 00:00:00.46
# Mc/sec: 3225.32
//
Query:       EPX70858.1  [L=528]
Description: triacylglycerol lipase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      3e-29  101.5   0.3    7.9e-29  100.1   0.1    1.7  2  DUF3336   Domain of unknown function (DUF3336)
    4.9e-08   33.4   0.4    7.6e-07   29.5   0.4    2.2  1  Patatin   Patatin-like phospholipase


Domain annotation for each model (and alignments):
>> DUF3336  Domain of unknown function (DUF3336)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.1   0.1   8.9e-33   7.9e-29      15     134 ..      51     171 ..      37     174 .. 0.94
   2 ?   -2.2   0.0      0.35   3.2e+03      89     105 ..     381     398 ..     358     405 .. 0.72

  Alignments for each domain:
  == domain 1  score: 100.1 bits;  conditional E-value: 8.9e-33
     DUF3336  15 lrkattYeeWkeaAkeLDellgndeWkendes.yYdyklvkkvlkkLrklrekedlkellellrtclkrNfagienprLYsetyiGTKklieeYideve 112
                  r++ t+e+Wke A  +D+  g  + + ++ s  Ydy+l+++ +++L+ +r+ke++  +l +lr++l rNf++i ++ LY+e y GTK lie+Y+ ev+
  EPX70858.1  51 KRDCCTWEDWKELAATVDKKSGRWKARFDPISdKYDYSLIERCTSTLKLYRTKEEAYPMLMFLRSSLLRNFGNIGDSGLYTENYSGTKILIEDYVREVN 149
                 47899*****************98888999********************************************************************* PP

     DUF3336 113 kalellaetkqlsaeekleffk 134
                 ++le+l+ t++ls+eek+ f  
  EPX70858.1 150 RCLEFLFFTNKLSIEEKHGFYS 171
                 *****************99976 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.35
     DUF3336  89 nprLYsetyiG.TKklie 105
                 + +LY +t+ G T k+i+
  EPX70858.1 381 HDELYHHTHTGyTLKMIR 398
                 6789****9995556655 PP

>> Patatin  Patatin-like phospholipase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.5   0.4   8.4e-11   7.6e-07       3      69 ..     184     247 ..     182     341 .. 0.86

  Alignments for each domain:
  == domain 1  score: 29.5 bits;  conditional E-value: 8.4e-11
     Patatin   3 lsGGGsrgafslgalkaLkkelgerfdiisGtSaGAiialllalgrdpaalvddlrnlllnkifdrd 69 
                 + GG + g++++g+ kaL +e+   +++++G+  GA+ia++++  rd +   ddl +++ nk +   
  EPX70858.1 184 FNGGTAFGLYHFGVAKAL-WERDLLPRVLAGSASGALIAAFVGVHRDEEL--DDLFQTFPNKLWEIC 247
                 7788888***********.*********************9999988777..999999999888766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (528 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       476  (0.0265492); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.44
# Mc/sec: 3617.90
//
Query:       EPX70859.1  [L=903]
Description: guanyl-nucleotide exchange factor Ste6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.1e-49  166.9   1.6    5.1e-49  166.9   1.6    2.2  2  RasGEF    RasGEF domain
    6.3e-10   38.5   0.0    1.3e-09   37.5   0.0    1.6  1  SH3_1     SH3 domain
    1.6e-09   38.0   1.3    1.6e-09   38.0   1.3    2.8  3  RasGEF_N  RasGEF N-terminal motif
    8.2e-08   32.0   0.0    1.7e-07   31.0   0.0    1.5  1  SH3_9     Variant SH3 domain
      2e-05   24.2   0.0    5.1e-05   22.9   0.0    1.6  1  SH3_2     Variant SH3 domain
  ------ inclusion threshold ------
      0.058   13.3   0.7        9.9    6.0   0.1    2.5  2  ERF       ERF superfamily
        0.1   12.4   0.1        0.7    9.7   0.0    2.3  2  Scm3      Centromere protein Scm3


Domain annotation for each model (and alignments):
>> RasGEF  RasGEF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1         1   2.7e+03     102     141 ..     288     333 ..     257     380 .. 0.51
   2 !  166.9   1.6     2e-52   5.1e-49       1     176 [.     658     833 ..     658     834 .. 0.94

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 1
      RasGEF 102 kktweavskkslktleeleelmspennfknyrealkssa......s 141
                 +   +++sk s+ t e l +++++  n  +y ++++s++      +
  EPX70859.1 288 ELILQNLSKGSRCTEEYLDNILDSFGNLLQYLKRVHSAFqkldytA 333
                 2222333333333333666666666666666666666555555442 PP

  == domain 2  score: 166.9 bits;  conditional E-value: 2e-52
      RasGEF   1 elAeqltlieaelfskikpeellgsawsked..rspnveaviarfnrlsnwvaseilseeslkkRakviekfikiakecrklnNfnslmailsaLqssp 97 
                 e+A+ql+lie++ fs+i p ++l ++ws+ +  +s++   v   +n+l+n+va++i++e++l+kR   + +fi++++ ++k+nNf+sl++i+saL+s+p
  EPX70859.1 658 EVAKQLCLIEFRTFSNIPPIHFLTKVWSNLKniSSEESGTVYYISNQLVNFVAETIVRERDLRKRTHYLGFFIQVCHCLFKYNNFASLFSIISALNSAP 756
                 79**************************88743223344567789****************************************************** PP

      RasGEF  98 vsrLkktweavskkslktleeleelmspennfknyrealkssasskpciPflglyltdltfieegnpdtlegkiNfeKr 176
                 v+rLk+tw+++s+k+  ++++l++l++ ++nf++yre l+++  s p +Pflg+y tdltf+++gn+dt ++ iNf+Kr
  EPX70859.1 757 VHRLKRTWSNLSNKYSVLFDSLTSLTNASKNFSQYRECLERC--SLPSVPFLGVYFTDLTFLKSGNKDTNKNLINFDKR 833
                 ******************************************..8888********************99999*****7 PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.5   0.0     5e-13   1.3e-09       2      48 .]       7      52 ..       6      52 .. 0.91

  Alignments for each domain:
  == domain 1  score: 37.5 bits;  conditional E-value: 5e-13
                ESSSBEXSS.TTBXEBSTTEEEEEEEECSSSEEEEEETTSTEEEEEEG CS
       SH3_1  2 AlYDYeaee.sdELsfkkGDviivleksedgWwkgrlkgtgkeGliPs 48
                A  DY  ++ ++ Lsf+ GD+iiv++  e+gW++g +    ++G++P+
  EPX70859.1  7 ARQDYLHNSkPSQLSFHTGDTIIVVNILENGWCDGICSQ--RRGWFPV 52
                6678888888****************************5..8*****5 PP

>> RasGEF_N  RasGEF N-terminal motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.0   1.3   6.1e-13   1.6e-09       1      91 [.     484     571 ..     484     585 .. 0.89
   2 ?   -2.9   0.0       3.1   7.8e+03      39      50 ..     616     627 ..     595     672 .. 0.52
   3 ?   -3.4   0.0       4.5   1.2e+04       7      29 ..     859     882 ..     858     883 .. 0.86

  Alignments for each domain:
  == domain 1  score: 38.0 bits;  conditional E-value: 6.1e-13
    RasGEF_N   1 qvkagtlekLierLtskrlldddfletFLltyrsFttpaeLlekLieryeinppnnlesdesnswnsksssnirlrvlsvlkewvenhyyd 91 
                 ++k ++l+ +++ +++ +++++ f+ +FL t+ s +++ +L++ L+++y +++++++ +d    ++ ++ ++ r +v++v+ +w+e+++ +
  EPX70859.1 484 KIKFASLASILNNIVRVDIDNTLFIRSFLSTHASIISSGDLFSILSSHYLFHSHSKTVTD---RNDASVINRSRKKVINVILTWLESCFIE 571
                 5899*********************************************98999888888...777888888999************9875 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 3.1
    RasGEF_N  39 aeLlekLierye 50 
                 ++L+  L + +e
  EPX70859.1 616 TKLVRPLTNSFE 627
                 222222333332 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 4.5
    RasGEF_N   7 lekLierLtsk.rlldddfletFL 29 
                 +++L++  +sk r  d+ ++e++L
  EPX70859.1 859 VQELVHEVVSKeRNPDIIYNESLL 882
                 6899*******9999999999887 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.0   0.0   6.7e-11   1.7e-07      12      48 ..      19      55 ..      11      56 .. 0.94

  Alignments for each domain:
  == domain 1  score: 31.0 bits;  conditional E-value: 6.7e-11
       SH3_9 12 eLsLqrGDvitvieesedgWlegsltGrtGlvPanyv 48
                 Ls+ +GD+i+v +  e+gW++g+ ++r+G++P++y+
  EPX70859.1 19 QLSFHTGDTIIVVNILENGWCDGICSQRRGWFPVSYI 55
                59**********************************9 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.0     2e-08   5.1e-05       7      53 ..      10      54 ..       5      57 .. 0.81

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 2e-08
                -B-S.CGCCB--B-TTEEEEEE..EEEECTTEEEEEECCCEEEEEGCG CS
       SH3_2  7 dyvg.edkseLsfkkGdvikvlslgskdsdgwwegevgGrvGlfPssl 53
                dy   +++s Lsf+ Gd+i v+   +   +gw+ g    r+G+fP s+
  EPX70859.1 10 DYLHnSKPSQLSFHTGDTIIVV---NILENGWCDGICSQRRGWFPVSY 54
                5555267777*******99999...5566699*************776 PP

>> ERF  ERF superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0    0.0074        19      19      50 ..     478     509 ..     453     549 .. 0.87
   2 ?    6.0   0.1    0.0039       9.9      19      45 ..     840     870 ..     824     887 .. 0.74

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0074
         ERF  19 kknqftkykYasledileaikpvlkehglilk 50 
                  +n+++k k+asl +il+ i +v +++ l++ 
  EPX70859.1 478 LYNDDGKIKFASLASILNNIVRVDIDNTLFIR 509
                 49******************999888888775 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.0039
         ERF  19 k....knqftkykYasledileaikpvlkeh 45 
                      + q ++yk+ sl+d+ e +++v++++
  EPX70859.1 840 LneiqQFQAVSYKFDSLNDVQELVHEVVSKE 870
                 2233344567*****************9986 PP

>> Scm3  Centromere protein Scm3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.79     2e+03       8      20 ..     349     361 ..     347     376 .. 0.82
   2 ?    9.7   0.0   0.00027       0.7      10      25 ..     758     773 ..     751     777 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.79
                 HHHHHHHHHHHHH CS
        Scm3   8 sderlkkrwesif 20 
                 ++e+++++ ++if
  EPX70859.1 349 TLENFSTKISDIF 361
                 789********99 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00027
                 HHHHHHHHHHHHHHHS CS
        Scm3  10 erlkkrwesifeKYer 25 
                 +rlk++w+++ +KY+ 
  EPX70859.1 758 HRLKRTWSNLSNKYSV 773
                 8*************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (903 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       766  (0.0427241); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.72u 0.29s 00:00:01.01 Elapsed: 00:00:00.47
# Mc/sec: 5723.27
//
Query:       EPX70860.1  [L=548]
Description: central kinetochore associated family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.7e-38  132.5  14.1    4.5e-24   84.9   2.7    2.1  2  Kinetochor_Ybp2  Uncharacterised protein family, YAP/Alf4/glo
     0.0049   16.9   0.8        1.5    8.8   0.1    2.6  2  DUF1804          Protein of unknown function (DUF1804)


Domain annotation for each model (and alignments):
>> Kinetochor_Ybp2  Uncharacterised protein family, YAP/Alf4/glomulin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.9   2.7     5e-28   4.5e-24       1     183 [.       1     163 [.       1     186 [. 0.88
   2 !   53.4   3.7   1.8e-18   1.6e-14     357     610 ..     302     531 ..     266     546 .. 0.84

  Alignments for each domain:
  == domain 1  score: 84.9 bits;  conditional E-value: 5e-28
                      -HHHHHHHS-------THHHHHHHHHHHHHHT..........SS-SHHHHCCCT..STHHHHHHTGGGGHHHHHHHHHTS---SSSTHHHHHHH CS
  Kinetochor_Ybp2   1 MeveeelktlveeappatDyltyltllelyleevn.ysieekeellpeLlelLq..dnkeltkeIGWDLpklLlkflpksnvedklvklvmecl 91 
                      M+++++++++ + +++++Dy +y t++e++le+    + e++ +ll  L+e Lq  +++eltkeI+WD  ++Ll+f++  +      k   ++ 
       EPX70860.1   1 MDWKKSVQKATALTIETKDYVSYCTMIEMLLEQNLtHKEEDRLDLLCGLHEELQkpEHEELTKEIAWDVLGMLLPFVSDNS-----SKEATDFA 89 
                      888899999999999*****************9999*****************7566********************9888.....78899*** PP

                      HHHHHCS-HHHHHHHHHGGGTS--C..............CHHHHHHHH.....HHHHHHHHHHHSSS-CHH..HHHHHHHHHHHHCCS-.---- CS
  Kinetochor_Ybp2  92 edlArlGNPkEllLkvcElLselsveDedseeddesikkkensvpfel.kfyvLlellssllkRiqtkyPsrFLatalsailnavtnlp.seet 183
                      + lA++GNPkE++Lk+ E L++  +                 +   +l ++ v +  ++s++ Ri t +P  FL + + ++ + +++ + ++e 
       EPX70860.1  90 HMLAEKGNPKEVFLKSNEILTSTVF-----------------K---NLsQLKVTVDSMNSAMNRIETNRPLAFLDNYIVSLCSSIARVAlVKEI 163
                      ************************9.................2...233557799************************999999998866655 PP

  == domain 2  score: 53.4 bits;  conditional E-value: 1.8e-18
                      CCS-S---HHHHHHHHHH...............HHHHHHT--.....SHHHHHHHHHHHHHHHCTS-TT-B-.......GGGGGSHHHHHHHHH CS
  Kinetochor_Ybp2 357 keiplsrsGiLlLltaryaensghllpkisfpDaielllrfvtpslesatfqnkgledvllyllwvalestst.....elkelpekvlkaflqa 445
                      +++  +++G++   t+r+ +++ ++l k+++++   ++l+ +        ++ +g +d  +++ +   +s        e ++ + + l ++lq 
       EPX70860.1 302 QKVMVDIKGCIAMITIRSYYRERNFLEKLVYESKRPITLKSI-----FTLISIEGNSDTSCFIDLALYQSLLLfkfivEHSTEDRHGLFSLLQI 390
                      5778899***********999999998888888888888877.....6677777777888876666655555567778888889********** PP

                      HHHHHHH-S-HHHHHHHHHHHHHHHHHB-HHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHCT----.........----TTTSHHHHHHHHH CS
  Kinetochor_Ybp2 446 lllitarqpspelrkitltlltrlLhlspedvrfkfIrdtLencpyesvkaaaigilKdlmlkaskssqaseleeasrtniflnperlsellsl 539
                      +   +a ++ p++r i+  ++  lL+  p d+rf+++ dtLe+cp+ +vka++++++++    ++  +           n fl++  +  + s+
       EPX70860.1 391 YQYFSAFNSEPWIRLIANDIVFHLLDPLPLDTRFEYVLDTLEECPFLNVKASILNYYQKNGVLSKPAD----------RNPFLDEGNIFKVISI 474
                      *********************************************************99988887777..........799****999999999 PP

                      HS--TTT......TTS-TTTTHHHHHHHHHHHHHHHHHS-TTTSSCCCTHHHHHHHTHHHHHHHHHHHHHH CS
  Kinetochor_Ybp2 540 vlnaleellassenktllqenldlilaaLNllvvlkkkwdlevlqlkkelekfekeyleplktllnsseae 610
                      ++  l+       n t ++ +l ++ +aL + +++k +++        +++  +  +l++++t++++ e++
       EPX70860.1 475 IIDDLS-------NPTTEPLLLIYLQQALIFIYYMKFQNR-------LDYNDQVHHFLQEIETFIQENEEK 531
                      955554.......67779*******************888.......667777777777777777655543 PP

>> DUF1804  Protein of unknown function (DUF1804)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.1   0.00016       1.5      82     156 ..      26      94 ..       6      98 .. 0.73
   2 !    5.7   0.1    0.0014        13      76     160 ..     117     203 ..     103     206 .. 0.75

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00016
     DUF1804  82 tleelrent.elsaedkveiLasLsdsfsktvaaakrldPelsklavalevlellaefvrekfpehaealleiLep 156
                 ++e+l e++  ++ ed++++L  L + ++k  +       e  + ++a +vl +l+ fv++++++ a ++  +L +
  EPX70860.1  26 MIEMLLEQNlTHKEEDRLDLLCGLHEELQKPEH-------EELTKEIAWDVLGMLLPFVSDNSSKEATDFAHMLAE 94 
                 555555555466666666666666666555322.......223458**************************9976 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0014
     DUF1804  76 vvqvqetleelrent.elsaedkveiLasLsdsfsktvaaakrldPelsklavalevlellaefvre..kfpehaealleiLepfgee 160
                 + q + t++++ +++ +++++  +  L ++  s+   +a +  l +e+++l v +  l+ + ++++   ++pe++++++++ + f e+
  EPX70860.1 117 LSQLKVTVDSMNSAMnRIETNRPLAFLDNYIVSLCSSIARV-ALVKEINRLDVWIMSLDSMEKMIQRfgRYPECHQNIVAAFTIFAEQ 203
                 45667777777777766667666777777666666666666.5689****************99997669**********99999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (548 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       648  (0.0361426); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.29s 00:00:00.85 Elapsed: 00:00:00.45
# Mc/sec: 3628.43
//
Query:       EPX70861.1  [L=338]
Description: ATP-Mg/Pi carrier [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.3e-69  228.5   2.0    5.1e-28   96.8   0.1    3.1  3  Mito_carr  Mitochondrial carrier protein
     0.0076   16.8   0.3        1.2    9.7   0.1    2.4  2  YtxH       YtxH-like protein
  ------ inclusion threshold ------
       0.05   13.0   0.0      0.076   12.4   0.0    1.2  1  TssN       Type VI secretion system, TssN


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.1   0.1   3.8e-23   2.2e-19       6      95 ..      16     103 ..      11     105 .. 0.94
   2 !   61.1   0.0   1.2e-20   7.2e-17       8      95 ..     113     205 ..     108     207 .. 0.91
   3 !   96.8   0.1   8.5e-32   5.1e-28       3      96 ..     212     331 ..     210     332 .. 0.86

  Alignments for each domain:
  == domain 1  score: 69.1 bits;  conditional E-value: 3.8e-23
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHH.HGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   6 lkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGl.rglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                 ++ l aGg++ga+a l+++ ld+vKtr q +  + k+++   +++ + +i++eeGl rgly+G+ p l+++ pa+al f++ye++kr+l++
  EPX70861.1  16 THVLTAGGIGGATADLLMHSLDTVKTRQQGALYTDKYRG---MVRSYLTIFQEEGLfRGLYSGVCPMLVGSLPATALFFSAYEFTKRHLMD 103
                 56789****************************999977...*************98*******************************987 PP

  == domain 2  score: 61.1 bits;  conditional E-value: 1.2e-20
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS.....HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   8 ellaGglagavatlvttPldvvKtrlqtqkksskksksaa.....ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                  llaG ++ ++a++v  P +v+Ktrlq+q++ ++k  ++      ++ ++k+i keeG r ++ G+ +++lr +p s+l++++ye+l++ +++
  EPX70861.1 113 FLLAGFVGDLFASVVYVPSEVLKTRLQLQGRYNNKYFKSDynypsFRGAIKQIAKEEGPRTFFFGYRATVLRDIPFSGLQLLFYEKLRQGVQR 205
                 589**************************999877554447999******************************************9987765 PP

  == domain 3  score: 96.8 bits;  conditional E-value: 8.5e-32
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH..........................CCCSSTTTSCSS........HHHHHHHHHHHHHHHGGGTT CS
   Mito_carr   3 lsvlkellaGglagavatlvttPldvvKtrlqt..........................qkksskksksaa........ildvlkkiykeeGlrglyrG 67 
                 ++v  ell+G+laga+a+++ttPld++Ktrlqt                          ++         +        i++vl+++y++eG +gl++G
  EPX70861.1 212 IGVGYELLIGSLAGAGAGFLTTPLDLAKTRLQTmvrptgvsdniksgryfygqmenslgKSA--------SvprkqttgIRKVLSTLYRNEGAMGLFKG 302
                 778899***************************99999999988888888887666654222........133444455******************** PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHHCTT CS
   Mito_carr  68 llpnllrvapasalkfvlyetlkrlllkk 96 
                 ++p++++++++s+l+fv+ye+++rl+++k
  EPX70861.1 303 VGPRVFWTSSQSSLMFVFYESIIRLFKQK 331
                 **************************876 PP

>> YtxH  YtxH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.8   0.0    0.0071        42       5      51 ..      20      66 ..      18     100 .. 0.89
   2 !    9.7   0.1    0.0002       1.2       4      21 ..     218     235 ..     216     258 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0071
        YtxH  5 liGaavGaaaglLlAPksGketRkdlkekaddlkekakelleeakek 51
                 +G++ Ga+a lL+      +tR++ + ++d+++  + ++l+ ++e 
  EPX70861.1 20 TAGGIGGATADLLMHSLDTVKTRQQGALYTDKYRGMVRSYLTIFQEE 66
                68*******************************99999998877765 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.0002
        YtxH   4 lliGaavGaaaglLlAPk 21 
                 lliG ++Ga+ag L++P 
  EPX70861.1 218 LLIGSLAGAGAGFLTTPL 235
                 89**************95 PP

>> TssN  Type VI secretion system, TssN
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   1.3e-05     0.076      97     173 ..      76     152 ..      52     171 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.3e-05
        TssN  97 illtlivillglvlfvlvfnllselqygvwaatsllvfiipllflktykallsIPveiYktwkypenkkeeevdevd 173
                 +  +l+  l + +lf+  +++++   +  + +  +l+f++  ++  ++ +++ +P e+ kt+   + + ++++ + d
  EPX70861.1  76 VCPMLVGSLPATALFFSAYEFTKRHLMDSYHVPETLSFLLAGFVGDLFASVVYVPSEVLKTRLQLQGRYNNKYFKSD 152
                 4456777788999************************************************9887774444444555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       414  (0.0230911); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2371.67
//
Query:       EPX70862.1  [L=479]
Description: meiotic recombination protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-16   59.2   0.4    8.6e-16   57.9   0.4    1.7  1  DUF2420   Protein of unknown function (DUF2420)


Domain annotation for each model (and alignments):
>> DUF2420  Protein of unknown function (DUF2420)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.9   0.4   4.8e-20   8.6e-16       5     104 ..     211     301 ..     208     305 .. 0.92

  Alignments for each domain:
  == domain 1  score: 57.9 bits;  conditional E-value: 4.8e-20
     DUF2420   5 esllnaslselfaalRsfleekegelvsaekElvLeipeLdltltEdnvynkdislndilsifkiLkenskseedvpesLsitlslqprFvskynaLve 103
                 ++l + +l++lf  +R++le+   +++  ++Elv e+ +L+l++ Ednvy+++i l dil++ +  ++         +s+s+  ++qprF+++yn+Lv+
  EPX70862.1 211 DDLNENTLEDLFGIVRARLESL--DALGSDSELVCEFSDLNLKIAEDNVYANQIHLVDILELLSVHCSHG-------KSFSVLFTTQPRFIARYNKLVQ 300
                 678899**************99..999**********************************998877776.......789*****************98 PP

     DUF2420 104 l 104
                  
  EPX70862.1 301 D 301
                 5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (479 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1184  (0.0660383); expected 358.6 (0.02)
Passed bias filter:                      378  (0.0210832); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 3557.07
//
Query:       EPX70863.1  [L=240]
Description: phosphatidylserine synthase Pps1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.2e-14   53.9   0.3    2.2e-14   53.9   0.3    2.0  2  CDP-OH_P_transf  CDP-alcohol phosphatidyltransferase


Domain annotation for each model (and alignments):
>> CDP-OH_P_transf  CDP-alcohol phosphatidyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.9   0.3   1.2e-18   2.2e-14       2      66 .]      45     117 ..      44     117 .. 0.91
   2 ?   -1.6   1.2      0.28   4.9e+03      41      41 ..     150     150 ..     124     228 .. 0.64

  Alignments for each domain:
  == domain 1  score: 53.9 bits;  conditional E-value: 1.2e-18
                      -HHHHHHHHHHHHHHHHHGGGS-H..........HHHHHHHHHHHHHTTHHHHHHHHTT---HHHHHHHHHHH CS
  CDP-OH_P_transf   2 lPnaiTllrlllsvlailllltyyp........lvlailllliasltDalDGklARrlnqvstlGkllDslaD 66 
                      l+++iTl++ +++v++i+  l y          lv a+ ++ +a ++D+lDGk+AR+++++s +G+ lDslaD
       EPX70863.1  45 LADLITLFNGFCGVMSIFSSLRYCLsgqtsskyLVRAMYFMPFALFFDFLDGKVARWRGKSSLMGQELDSLAD 117
                      789**************96655555***********************************555*********9 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.28
                      T CS
  CDP-OH_P_transf  41 D 41 
                      +
       EPX70863.1 150 G 150
                      1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       416  (0.0232026); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.29s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1705.41
//
Query:       EPX70864.1  [L=191]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.1e-14   53.1   5.2    5.1e-14   51.9   5.2    1.7  1  G-patch    G-patch domain
  ------ inclusion threshold ------
      0.024   14.7   1.7      0.078   13.1   1.7    1.9  1  G-patch_2  G-patch domain


Domain annotation for each model (and alignments):
>> G-patch  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.9   5.2   5.7e-18   5.1e-14       2      42 ..     150     190 ..     149     191 .] 0.96

  Alignments for each domain:
  == domain 1  score: 51.9 bits;  conditional E-value: 5.7e-18
     G-patch   2 sniGvkmLqkmGWkpGqGLGkkeqGiaePieakikkdraGl 42 
                 +++G k+L++mGW+ G+GLG+++qGi++P+ a +k +++Gl
  EPX70864.1 150 GGKGKKLLERMGWSGGMGLGSENQGITDPVAAVVKNNKRGL 190
                 699*************************************8 PP

>> G-patch_2  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   1.7   8.7e-06     0.078      18      55 ..     153     190 ..     150     190 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 8.7e-06
   G-patch_2  18 GaAlLrGMGWkegqgigknkkgrvkpeepkrRpgrlGL 55 
                 G  lL  MGW+ g g g++++g ++p+    +  + GL
  EPX70864.1 153 GKKLLERMGWSGGMGLGSENQGITDPVAAVVKNNKRGL 190
                 7789*******************999988877777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       745  (0.0415528); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.27s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 1360.99
//
Query:       EPX70865.1  [L=133]
Description: adenosine 5'-monophosphoramidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-23   83.7   0.1    1.4e-23   83.4   0.1    1.1  1  HIT       HIT domain
    6.3e-13   49.2   0.0    8.1e-13   48.8   0.0    1.1  1  DcpS_C    Scavenger mRNA decapping enzyme C-term binding
    0.00081   19.2   0.0      0.001   18.9   0.0    1.2  1  CwfJ_C_1  Protein similar to CwfJ C-terminus 1
  ------ inclusion threshold ------
      0.014   15.5   0.0      0.018   15.1   0.0    1.1  1  DUF2275   Predicted integral membrane protein (DUF2275)
       0.53   10.0   2.1         15    5.4   0.3    2.4  2  DUF3665   Branched-chain amino acid aminotransferase


Domain annotation for each model (and alignments):
>> HIT  HIT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.4   0.1     4e-27   1.4e-23       1      95 [.      10     100 ..      10     103 .. 0.97

  Alignments for each domain:
  == domain 1  score: 83.4 bits;  conditional E-value: 4e-27
                 TGCC-CCEEEE-SSEEEEE-SS-SSSSEEEEEESSTGCSGGGCCHHHHHHHHHHHHHHHHHHHTCTTCCCEEEEEEESGGGT-SSSS-EEEEEEC CS
         HIT   1 ekeipstvvyeddlvlafldidpkapghlLvipkkhlselhdlteeelakllsavkkvakalqkkfknkglrvvinngahagqsvahlHiHvipr 95 
                 ++eip+ ++ e+ ++l fldi+p+a+gh Lvipk+h ++l+ l++e la++l ++kkvaka+++    + ++++ nng+ a+q v h+H+H+ip+
  EPX70865.1  10 RGEIPCVKLAETAKTLSFLDISPTAKGHALVIPKEHSEKLTGLSDESLADILPVAKKVAKAIGA----ENYNFLQNNGRIAHQFVDHVHFHIIPK 100
                 589************************************************************7....89************************8 PP

>> DcpS_C  Scavenger mRNA decapping enzyme C-term binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.8   0.0   2.3e-16   8.1e-13       1     107 [.       2     105 ..       2     109 .. 0.80

  Alignments for each domain:
  == domain 1  score: 48.8 bits;  conditional E-value: 2.3e-16
                 T-HHHHHHTTSS-B-EEEE-SSEEEEE-SS-SSSEEEEEEESS---SGGG--TTTT.THHHHHHHHHHHHHHHTT-T-EEEEE--SCCCT--S-S--EE CS
      DcpS_C   1 kwvfnilakgkepervvyedekfvvlkDikpkaklhllvipkrdikslrdLtkehl.pllkemrekakkvieekynevdaeelrvgvhyqPsvyhlHlH 98 
                 +++f+++++g++p   + e+ k++ + Di p ak h lvipk++ ++l+ L++e l ++l   +++ak++  e+y        + g  +++ v+h+H+H
  EPX70865.1   2 SCIFCKIIRGEIPCVKLAETAKTLSFLDISPTAKGHALVIPKEHSEKLTGLSDESLaDILPVAKKVAKAIGAENY----NFLQNNGRIAHQFVDHVHFH 96 
                 69*************************************************766430444444444444444444....3446789999********** PP

                 EEE...... CS
      DcpS_C  99 visldfesp 107
                 +i + +e+ 
  EPX70865.1  97 IIPKPNEEF 105
                 **9988875 PP

>> CwfJ_C_1  Protein similar to CwfJ C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   2.8e-07     0.001      42     112 ..      31     103 ..       2     107 .. 0.85

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 2.8e-07
                 S-SSTT-EEEEESS--SSTTSS-HHHHHHHHHHHHHHHHHHHHTT--EEEEEE-..SSS-----EEEEE--HH CS
    CwfJ_C_1  42 gpLssgHvliipieHisallsldeevldeirkfrkalvkmykkqdkdavvfEis..sersvHlaiqvipvpks 112
                  p ++gH l+ip eH ++l+ l++e l +i    k ++k   +++ + +       ++   H++ ++ip p++
  EPX70865.1  31 SPTAKGHALVIPKEHSEKLTGLSDESLADILPVAKKVAKAIGAENYNFLQNNGRiaHQFVDHVHFHIIPKPNE 103
                 45699***********************************999999999877555488899*******98765 PP

>> DUF2275  Predicted integral membrane protein (DUF2275)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   0.0   5.1e-06     0.018      58     134 ..      23      98 ..       9     105 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 5.1e-06
     DUF2275  58 atiskmdvvrvlkkaglslkaeevqkkvkgldeegLgaiiepgstearrspaeaiksiesdpkaasqipdaanfeik 134
                  t+s  d+   +k   l + +e+  +k  gl+ e+L+ i + + + a++++ae  + ++ + + a q +d + f+i 
  EPX70865.1  23 KTLSFLDISPTAKGHALVIPKEH-SEKLTGLSDESLADILPVAKKVAKAIGAENYNFLQNNGRIAHQFVDHVHFHII 98 
                 44555555555555556677888.9*************************************************996 PP

>> DUF3665  Branched-chain amino acid aminotransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.3    0.0041        15      13      21 ..      53      61 ..      53      62 .. 0.96
   2 ?    4.0   0.1     0.011        40      11      19 ..     115     123 ..     113     124 .. 0.90

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0041
     DUF3665 13 SPErLaEIL 21
                S+E La+IL
  EPX70865.1 53 SDESLADIL 61
                9*******9 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.011
     DUF3665  11 PTSPErLaE 19 
                 PTS E LaE
  EPX70865.1 115 PTSKEDLAE 123
                 ********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       309  (0.0172346); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.46
# Mc/sec: 876.84
//
Query:       EPX70866.1  [L=219]
Description: inner membrane protein Cox18 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.4e-18   66.1   0.3    3.9e-18   65.9   0.3    1.0  1  60KD_IMP  60Kd inner membrane protein


Domain annotation for each model (and alignments):
>> 60KD_IMP  60Kd inner membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.9   0.3   2.2e-22   3.9e-18       4     165 ..      17     199 ..      14     200 .. 0.84

  Alignments for each domain:
  == domain 1  score: 65.9 bits;  conditional E-value: 2.2e-22
    60KD_IMP   4 aIilltiivr.lillpltlkqlkssakmqelqPelkeiqekykkdkqklqqemmklYkkegvnplaGclplLiqlpif.ialyrvlrsla......... 91 
                  I  + i++r +i+lpl+++++k+ ++  ++qP lke +++  +d ++ ++   k+Yk+   +p++     + qlp+f +a +++ + ++         
  EPX70866.1  17 EIPAMAIFLRsTITLPLAISSIKTARRYGQVQPLLKEAKKRCPDD-KAYKTFRSKIYKRFSCHPIKLYALPFAQLPLFaFASFQLRKAVEvspetmste 114
                 56667777774799****************************555.8999999*************9999*******9678888888877888776555 PP

    60KD_IMP  92 .sfwikdLsapd....lpillavttflqqkls..ksk.....kmqkmmlyvmplmilffslsfpaglvlYwlvsnllsiaqqliin 165
                   +w++dL+ pd    lp +la+t + ++++   + +     ++ ++  ++  +++ f++ + +++l+lYw++s ++s++q++ ++
  EPX70866.1 115 gMLWFPDLTMPDphgiLPAILACTYLTNMSILrrP-QdsrllRIFNTAGILSAFFVSFMASKTSTALSLYWTTSAIYSLVQNICLR 199
                 444********************999888888431.24455544567778999999*************************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       410  (0.022868); expected 358.6 (0.02)
Passed bias filter:                      302  (0.0168442); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.27s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1591.17
//
Query:       EPX70867.1  [L=329]
Description: NADPH quinone oxidoreductase/ARE-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.1e-22   77.8   0.0    1.1e-21   77.2   0.0    1.3  1  ADH_zinc_N    Zinc-binding dehydrogenase
    1.3e-13   52.1   0.0    2.6e-13   51.2   0.0    1.5  1  ADH_zinc_N_2  Zinc-binding dehydrogenase
    1.7e-09   37.6   0.0    1.4e-07   31.3   0.0    2.4  2  ADH_N         Alcohol dehydrogenase GroES-like domain
     0.0032   16.9   0.0     0.0057   16.1   0.0    1.4  1  adh_short     short chain dehydrogenase
     0.0043   16.0   0.0     0.0069   15.3   0.0    1.3  1  RELT          Tumour necrosis factor receptor superfamily mem
  ------ inclusion threshold ------
      0.019   14.8   0.0      0.038   13.9   0.0    1.4  1  ADH_N_2       N-terminal domain of oxidoreductase


Domain annotation for each model (and alignments):
>> ADH_zinc_N  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.2   0.0   3.6e-25   1.1e-21       1     115 [.     152     265 ..     152     279 .. 0.87

  Alignments for each domain:
  == domain 1  score: 77.2 bits;  conditional E-value: 3.6e-25
                 HHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTESEEEETTTCHHHHHHHHHTTTSSEEEEEESSCSHHHHHHHHHCEEEEEEEEECSCTSSEEEEEH CS
  ADH_zinc_N   1 gvGlaavqlAkalGaeviavdsseeklelakklGadevinykeadlverikeltggegvdvvfecvGsgatleaalkllkpgGrlvvvGggkgeeefdl 99 
                 gvGl+++q++k  G++via++s++ek++la ++Ga+ + +y+e  +v+  ++ t+g+gv+++++ vG ++t+e ++++l+ gG+ v +G ++g+ +f +
  EPX70867.1 152 GVGLILCQMLKRRGVHVIATASTPEKRKLALQNGAEIACTYEE--FVDVSRQKTDGKGVHASYDSVG-KDTFEKSMDALRNGGTYVNFGNSSGKIDFLP 247
                 9****************************************55..**********************.**********************999888777 PP

                 HHHH.HTT-EE.EEE-SS CS
  ADH_zinc_N 100 rnll.lkeksi.lGsllg 115
                 +nl+  k +++ + +l+g
  EPX70867.1 248 FNLItSKCIKVvRPTLFG 265
                 776647766662444444 PP

>> ADH_zinc_N_2  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.2   0.0   8.7e-17   2.6e-13       2     133 .]     185     320 ..     184     320 .. 0.77

  Alignments for each domain:
  == domain 1  score: 51.2 bits;  conditional E-value: 8.7e-17
                   T-SEEEETT.STTHH.HHH-TT-EEEEEES-HHHHH.HHHHHHEEEEEEEEE----......S-EEE-CHHHCTTT-EEEE--GGG...-..-HHHH CS
  ADH_zinc_N_2   2 GAdevidyr.tedfe.aatggegvDvvldtvggealleaslkvlpggGrlvsiggpp.....lsaallkpakkrkgrsvkyeflfsmkas.aqadil 90 
                   GA+ +  y+   d+  ++t+g+gv + +d+vg++++ e+s+++l++gG++v  g+++     l+++l   +   k  + ++  +++     +  +  
    EPX70867.1 185 GAEIACTYEeFVDVSrQKTDGKGVHASYDSVGKDTF-EKSMDALRNGGTYVNFGNSSgkidfLPFNLITSKC-IKVVRPTLFGYLDS--EeVFDRYT 277
                   555555677677787999******************.*******888******9755576653333333333.33333444444433..24477778 PP

                   HHHHHHHHHHH----EEEEEEGGGHHHHHHHHHSS--SSEEEE CS
  ADH_zinc_N_2  91 eelaalieeGklrpvvdrvfpleeaaeAhrylesgrarGKiVl 133
                    +l + i e+kl++ + ++++l+ea+eAh++ +s++++GK+ l
    EPX70867.1 278 SKLWKEILENKLNIAIHHTWKLAEAKEAHDKFQSRATTGKLLL 320
                   99**************************************976 PP

>> ADH_N  Alcohol dehydrogenase GroES-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.3   0.0   4.8e-11   1.4e-07       2      62 ..      30      89 ..      29     102 .. 0.90
   2 ?    3.8   0.1     0.017        50      54      97 ..     163     211 ..     127     220 .. 0.80

  Alignments for each domain:
  == domain 1  score: 31.3 bits;  conditional E-value: 4.8e-11
                TEEEEEEEEEEE-HHHHHHHTTSTTTTSSSSEE---EEEEEEEEESTT-CS.--TT-EEEE- CS
       ADH_N  2 gevlikvkaagiCgsDlhilkggkelevklplilGHEivGeveevgpevkk.lkvGdrVvve 62
                +++l+k ++ag++  D  + +g   ++v+lp++ G E +G+v evg++++k +k GdrVv  
  EPX70867.1 30 DKLLVKNAYAGLNYIDNYCRSG--LYPVPLPFVSGKEGSGIVTEVGSSCSKkFKAGDRVVYL 89
                57899************99999..8**********************99888*******974 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.017
                 -TT-EEEE-SEEE-SSSHHHHTT-GGG-TTBEETTTS.....S-SSSBS CS
       ADH_N  54 kvGdrVvvepliscgeCaaCkegeenlCeeakllgvs.....ldGgfae 97 
                 + G +V++ + ++ ++  a ++g+e +C+++++++vs      +G +a+
  EPX70867.1 163 RRGVHVIATASTPEKRKLALQNGAEIACTYEEFVDVSrqktdGKGVHAS 211
                 46889999999999999999**************999877444555555 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   1.9e-06    0.0057       3      83 ..     144     229 ..     142     257 .. 0.74

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.9e-06
                 EEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHT...TSEEEEEE-TTTSHHHHHHHHHHHHHHH..SSESEEEE CS
   adh_short   3 vlvtGassGIGraiakelakeGakvvvvdrseekleevakelkee...gakalaiqvDvtdreevealvekavkkl..gkldvLvn 83 
                 v+v  a++G+G+ +++ l ++G++v+++++++ek + ++++  e     ++++ ++   td + v a ++ + k++  +++d+L n
  EPX70867.1 144 VIVHAAAGGVGLILCQMLKRRGVHVIATASTPEKRKLALQNGAEIactYEEFVDVSRQKTDGKGVHASYDSVGKDTfeKSMDALRN 229
                 899******************************99877777555543344455555555555566666666666555555666655 PP

>> RELT  Tumour necrosis factor receptor superfamily member 19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   2.3e-06    0.0069       9      40 ..     146     177 ..     143     179 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 2.3e-06
        RELT   9 vFflmGLlGvLiChvLkkKGYrCttekeeeee 40 
                 v    G +G+++C +Lk++G ++ + + ++e+
  EPX70867.1 146 VHAAAGGVGLILCQMLKRRGVHVIATASTPEK 177
                 55567889**************9998888776 PP

>> ADH_N_2  N-terminal domain of oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   1.3e-05     0.038      19      92 ..      18      90 ..      10     103 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.3e-05
     ADH_N_2 19 eleeeelpelkdGevlvralylSvDPymRgrmndaksyve.pvelgdvmrggavgeVveSknpdfkvGdlVvgll 92
                ++ + e+p++  +++lv++ y ++  y+  + ++    v+ p+  g+   +g v eV  S +++fk+Gd Vv l+
  EPX70867.1 18 QYIQREIPKVSGDKLLVKNAYAGLN-YIDNYCRSGLYPVPlPFVSGKE-GSGIVTEVGSSCSKKFKAGDRVVYLT 90
                667899****************986.5555665555656659999987.55689*****************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (329 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       594  (0.0331307); expected 358.6 (0.02)
Passed bias filter:                      546  (0.0304535); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 2297.79
//
Query:       EPX70868.1  [L=273]
Description: MVB sorting pathway protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.3e-24   85.7   0.1    4.5e-24   85.2   0.1    1.1  1  Ist1           Regulator of Vps4 activity in the MVB pathway
  ------ inclusion threshold ------
          2    8.7   4.0        1.1    9.6   0.6    2.1  2  Chi-conotoxin  chi-Conotoxin or t superfamily


Domain annotation for each model (and alignments):
>> Ist1  Regulator of Vps4 activity in the MVB pathway
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.2   0.1     5e-28   4.5e-24       2     161 ..       6     164 ..       5     165 .. 0.92

  Alignments for each domain:
  == domain 1  score: 85.2 bits;  conditional E-value: 5e-28
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTT.--SSSSSHHHHHHHHHHHHHH- CS
        Ist1   2 tqlklaiqrlkllqkkkealakqarrdiaqlLengkeekArirveqliredillelleilelycelllarlsllek.qkeldeelkEAvssliyAaprv 99 
                  qlkla +rl++l+kk+ealakqarr ++  L++   + Ar+rve li +d+++elle+l++  e+l +r s+lek   + + + k +   ++ Aap++
  EPX70868.1   6 LQLKLAATRLEILRKKEEALAKQARRTVSFGLKTYSSTLARARVEPLIMQDVYMELLELLQVDAEILANRTSILEKrGFNSEANWKSSLYHILAAAPQL 104
                 59*************************************************************************9344689999************** PP

                 TTTTTHHHHHHHHHTTS-HHHHHHHHTT.-T.T--HHHHHHHS-----HHHHHHHHHHHHHHH CS
        Ist1 100 selkELkelrdllaekyGkefakaaven.kdngVnekvvkklsvktpskelvekylkeIAkey 161
                   +kELk + d l++ yGk+f++    + ++   + ++ + l +  ps+elv+ y++e+ ++y
  EPX70868.1 105 -PIKELKFVHDFLVRLYGKDFTQLTDPDlSK--NDVQFYQLLYPPIPSEELVNGYIEELRRTY 164
                 .********************7666655454..5568*********************98776 PP

>> Chi-conotoxin  chi-Conotoxin or t superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.2       0.2   1.8e+03      26      43 ..     190     207 ..     183     217 .. 0.56
   2 ?    9.6   0.6   0.00012       1.1      15      33 ..     232     250 ..     231     265 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.2
  Chi-conotoxin  26 tkddvplaSfhdnakrtl 43 
                     +d  + +S +d+a +t 
     EPX70868.1 190 SQDTPAPSSTQDEASKTN 207
                    344444456666666654 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00012
  Chi-conotoxin  15 aSaPsvdaqpktkddvpla 33 
                     SaPs  +qp+tk+ vp  
     EPX70868.1 232 NSAPSSHSQPTTKNTVPPK 250
                    69**************865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (273 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       973  (0.0542696); expected 358.6 (0.02)
Passed bias filter:                      421  (0.0234815); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 1905.97
//
Query:       EPX70869.1  [L=603]
Description: ATP-dependent RNA helicase Dbp6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-43  147.4   0.0      8e-43  146.2   0.0    1.7  2  DEAD        DEAD/DEAH box helicase
    4.3e-23   81.8   0.0    1.2e-22   80.3   0.0    1.8  1  Helicase_C  Helicase conserved C-terminal domain
    1.3e-11   44.8   0.3    1.1e-10   41.8   0.0    2.2  2  ResIII      Type III restriction enzyme, res subunit
    0.00085   18.1   0.2      0.019   13.7   0.0    2.1  2  SNF2_N      SNF2 family N-terminal domain
  ------ inclusion threshold ------
      0.042   14.2   0.0        0.1   12.9   0.0    1.6  1  AAA_19      AAA domain
       0.13   12.4   1.7       0.39   10.8   1.7    1.8  1  PUFD        BCORL-PCGF1-binding domain


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.1       3.1   9.4e+03      60      94 ..      38      71 ..      32      76 .. 0.55
   2 !  146.2   0.0   2.7e-46     8e-43       2     175 ..     152     371 ..     151     372 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 3.1
                HHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHH CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 60 aeqtlnnlkkfkkyidlrvlliiggvaardqlskl 94
                a  t+++lkk+ +  +  ++  i+++++++q +++
  EPX70869.1 38 ASATIERLKKSASLSQ-AAQQKIKEKSENEQEEDI 71
                4556666666666332.333445666666666555 PP

  == domain 2  score: 146.2 bits;  conditional E-value: 2.7e-46
                 HHHHHHHHHHH..........TTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHH CS
                 xxxxxxxxxxx..........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   2 diQaeaiplil..........gggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardq 90 
                 ++Q++a+pl+l           ggd++v+a+TGsGKTla+++p++q++++ +  ++ ++++++PtreL+ q+ ++++ f++ ++l v+ ++g+++ +++
  EPX70869.1 152 AVQSSALPLLLqegrdgpsysYGGDLCVSAATGSGKTLAYVLPIVQCLSR-RVVPHLRCVVIVPTRELTIQVTRTFEIFGSCMGLGVCGWTGQKNLQQE 249
                 68999*****96655555555559************************88.9*****************************************999999 PP

                 HHHH....H.TT..CSEEEEEHHHHHHHH.HCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTT...................... CS
                 xxxx....x.xx..xxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...................... RF
        DEAD  91 lskl....d.ng..vdivvgtpgrlddll.stgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklq...................... 159
                 + +l    d ng  vdi+v+tpgrl+d++ ++++++l+++r+lV+DEadrlldq+f+ + + +++++++ +     +                      
  EPX70869.1 250 QYQLlggiDgNGstVDILVTTPGRLVDHIqNDNNFSLQHLRYLVIDEADRLLDQSFQSWADVVMTEIDHPK-----Nvlmmdnepshqkqivapfflps 343
                 99997888344467*************9977889*********************************6554.....3444557999************* PP

                 ............SEEEEEESSBSHHHHH CS
                 ............xxxxxxxxxxxxxxxx RF
        DEAD 160 ............rqvivlSATlpkdvkk 175
                              q +v+SATl++d++k
  EPX70869.1 344 lptalphhldspLQKLVFSATLTRDPSK 371
                 **********9999*********99887 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.3   0.0   4.1e-26   1.2e-22       4     111 .]     424     536 ..     421     536 .. 0.86

  Alignments for each domain:
  == domain 1  score: 80.3 bits;  conditional E-value: 4.1e-26
                 HHHHHHHHHTTTTSEEEEEESSHH...HHHH.HHHHHHHT.....TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSS CS
  Helicase_C   4 eallellkleeeggkilifvntid...rlek.vklllekk.....gikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdl 93 
                   l +l+ ++++ +++l+fv++ +   rl++ ++++   +     ++ +  + g+l+ +er+++l+ f +ge ++L+++d ++rGid+ + ++Vin+d+
  EPX70869.1 424 ILLHQLI-HSNNLSNVLCFVKSNEgaaRLHRlLEII---NgiegkNYPCGLVSGNLSRDERKKMLNGFASGELKLLVCSDLMARGIDVANTEHVINYDP 518
                 5566666.899999**********766554244444...2344558***************************************************** PP

                 SSSHHHHHHHHTTSSSTT CS
  Helicase_C  94 prnvtsyiqriGRtgRag 111
                 p ++++y++riGRt+Rag
  EPX70869.1 519 PSSLRRYVHRIGRTARAG 536
                 ****************97 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   2.4       1.1   3.1e+03      86     122 ..      18      61 ..       7      82 .. 0.45
   2 !   41.8   0.0   3.7e-14   1.1e-10      26     156 ..     176     315 ..     131     326 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 1.1
                 EEEESSS-B--.......-SEEEEEHHHHHHTH............ CS
      ResIII  86 gkkvsgdkkkakekdstnkkilvttiqsldadseee........e 122
                 +kk++++k+k  e ++ +++   +ti++l+++ +          e
  EPX70869.1  18 NKKLKKRKRKD-EDKNPESDAASATIERLKKSASLSqaaqqkikE 61 
                 33444443333.333334444444444444444333223322220 PP

  == domain 2  score: 41.8 bits;  conditional E-value: 3.7e-14
                 EEEEEESTTSTHHHHHHHHHHHH-S.......-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--...............-SEEEEEHHHH CS
      ResIII  26 rglikmaTGtGKTlvaaklierllkkgkee..kflflvprkslleqtleefkkflseaykeigkkvsgdkkka........kekdstnkkilvttiqsl 114
                  +++ +aTG+GKTl ++  i ++l+ +     +++++vp+++l+ q  ++f+ f s+    +++ + +++ ++          ++ ++ +ilvtt  +l
  EPX70869.1 176 DLCVSAATGSGKTLAYVLPIVQCLSRRVVPhlRCVVIVPTRELTIQVTRTFEIFGSCMGLGVCGWTGQKNLQQeqyqllggIDGNGSTVDILVTTPGRL 274
                 689*************9999999998776689*************************988765554444444477778999899999************ PP

                 HHTH........HHHTTT-SEEEEETGGGTTS...TTTHHH.HHT CS
      ResIII 115 dadseeeeeeseellrdrfdviiiDEaHrlgak..kswrei.lek 156
                   ++    ++++ ++ ++  +++iDEa rl ++  +sw  + +  
  EPX70869.1 275 VDHI----QNDNNFSLQHLRYLVIDEADRLLDQsfQSWADVvMTE 315
                 ****....99999999****************8444888854333 PP

>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.0   6.3e-06     0.019      98     193 ..      33     306 ..      13     324 .. 0.72
   2 ?    2.5   0.0     0.016        49     233     312 ..     517     596 ..     511     603 .] 0.85

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 6.3e-06
                 -.................................................................................................. CS
                 x.................................................................................................. RF
      SNF2_N  98 p.................................................................................................. 98 
                 p                                                                                                  
  EPX70869.1  33 Pesdaasatierlkksaslsqaaqqkikekseneqeediemqdieqnmplhdltpipqpdidehleekshivpsvvsslprwlsqpilvdptatvefas 131
                 444445556666666666666666666666666666666666666666667777777777777777777777777777777777777777777777777 PP

                 .............................................................................EEEE--H.HHHHHHHHHHHHH- CS
                 .............................................................................xxxxxxx.xxxxxxxxxxxxxx RF
      SNF2_N  99 .............................................................................tLivvPa.slldqWeneierhv 119
                                                                                               +++vP+ +l  q ++++e + 
  EPX70869.1 132 lniasklveklhnqnivhgfavqssalplllqegrdgpsysyggdlcvsaatgsgktlayvlpivqclsrrvvphlrCVVIVPTrELTIQVTRTFEIFG 230
                 7777777777777777777777777777777777777777777777777777777777777777777777777777799*****9************** PP

                 TTS-EEE--SSHHHH------------...-----EEEE-HHHHHHHT......TTS-S-S-SEEEES-GGGT--T..T CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..x RF
      SNF2_N 120 sssalrvlvyggqkkmkkkntkvapkl...ladydvvittYdvlsreaelqkkrsvlkqvewkrvvlDEghtlkns..t 193
                 s + l v+ ++gqk+ ++++ +++  +     + d+++tt  +l  +    ++ + ++ ++ +++v+DE+ +l  +  +
  EPX70869.1 231 SCMGLGVCGWTGQKNLQQEQYQLLGGIdgnGSTVDILVTTPGRLVDHI---QNDNNFSLQHLRYLVIDEADRLLDQsfQ 306
                 *************998888777765541116799***********776...79999**************998665444 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.016
                 TTT--HHHHHHHTHHHHHHHHHHHHHHHHTT-STTEE---GGGT--S---EEEEEEEEE--HHHHHHHH........... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 233 epfgekqtfdkllqrpieaqaekgrsrLlqllqrlmlrrakkdveknlPpkteeiiflklskverksYnrllevlrkkal 312
                 +p ++ + +  ++ r ++a ++ +++ L+q  +    ++  k + + lP +  ++++ +l +++ ++Y ++le lr ++ 
  EPX70869.1 517 DPPSSLRRYVHRIGRTARAGRNGCAWTLVQDHEGHHFSKLVKHLGRTLPLQRLRLHLKDLPEENVELYDNALETLRREVY 596
                 555667777888899999999999999999999999999999**99***********************99998887765 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   3.4e-05       0.1      13     114 ..     177     300 ..     171     316 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 3.4e-05
      AAA_19  13 llvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAakelrerlaalgaeatTiHrlalldfddlltealelle................... 92 
                 l+v a  G+GKT   +  +  +++++ v+  +++++ +t+  + +++    ++ ++ + +   +  + ++l++e+ +ll                    
  EPX70869.1 177 LCVSAATGSGKTLAYVLPIVQCLSRRVVPHLRCVVIVPTRELTIQVTRTF-EIFGSCMGLGVCGWTGQKNLQQEQYQLLGgidgngstvdilvttpgrl 274
                 789*********99888888888888899***************999666.777775555555554444444444444445555555555555555555 PP

      AAA_19  93 ....eaeeekklqeeellivDEfqdv 114
                     +++++  lq+  +l++DE+  +
  EPX70869.1 275 vdhiQNDNNFSLQHLRYLVIDEADRL 300
                 55655566667766669999998765 PP

>> PUFD  BCORL-PCGF1-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   1.7   0.00013      0.39      38      99 ..      19      78 ..      15      85 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00013
        PUFD 38 krLklssrifrarfPhlevvslaeaefyrqvslsqllsseeeleaedepdskelveLvelep 99
                k+Lk  +r  ++++P+ + +s +   + + +slsq ++++ + ++e+  +++e +e+  +e+
  EPX70869.1 19 KKLKKRKRKDEDKNPESDAASATIERLKKSASLSQAAQQKIKEKSEN--EQEEDIEMQDIEQ 78
                8999999999*************************999887776666..5555555555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (603 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1637  (0.0913046); expected 358.6 (0.02)
Passed bias filter:                      880  (0.0490825); expected 358.6 (0.02)
Passed Vit filter:                       126  (0.00702772); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.81u 0.30s 00:00:01.11 Elapsed: 00:00:00.46
# Mc/sec: 3903.42
//
Query:       EPX70870.1  [L=118]
Description: transthyretin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.4e-37  126.2   0.1    9.3e-37  126.1   0.1    1.0  1  Transthyretin    HIUase/Transthyretin family
     0.0056   16.9   1.3       0.14   12.4   1.3    2.1  1  CarboxypepD_reg  Carboxypeptidase regulatory-like domain
  ------ inclusion threshold ------
      0.083   12.9   1.5       0.13   12.2   1.5    1.3  1  Big_1            Bacterial Ig-like domain (group 1)
       0.13   12.2   0.1          1    9.3   0.0    2.0  2  MRF_C2           Myelin gene regulatory factor C-terminal dom


Domain annotation for each model (and alignments):
>> Transthyretin  HIUase/Transthyretin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.1   0.1   2.1e-40   9.3e-37       2     110 .]       7     117 ..       6     117 .. 0.98

  Alignments for each domain:
  == domain 1  score: 126.1 bits;  conditional E-value: 2.1e-40
                    EEEEEETTTTEE-TS-EEEEEEECTTSS..EEEEEEEEE--TTSCESSSSEEGCGB-SEEEEEEEEHHHHHHHTTS..SESCEEEEEEESTTSEEE CS
  Transthyretin   2 tthvLdttaGkpaagvevelekleesee..eaellaesttdadGrvkellaekeeleagtyklrfeteeYfekegtesffpevevvfevkeeehyh 95 
                    t hvLdtt+G pa++++v+++k+++s++  ++e+la++ t+a+Grv+++    ee+e+g+yk+rf+t+ Y+++ ++e+f+p+ve+++++++++hyh
     EPX70870.1   7 TAHVLDTTRGVPAENISVSVSKINHSNTtlAQEQLATAITNANGRVSQWNVPLEEVESGIYKFRFDTGPYYDSLSMETFYPYVELTVNINKGQHYH 102
                    89*********************9999877889*************************************************************** PP

                    EEEEEETTEEEEE-B CS
  Transthyretin  96 vPlllspfgYstYrG 110
                    +Plllspfg++tYrG
     EPX70870.1 103 IPLLLSPFGFTTYRG 117
                    **************9 PP

>> CarboxypepD_reg  Carboxypeptidase regulatory-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   1.3   3.1e-05      0.14       5      55 ..       9      73 ..       6     108 .. 0.65

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 3.1e-05
  CarboxypepD_reg  5 rVtda.sgapiagatVtvtn.adtg......tvastttdadGafrlrglpp.....gtysvtv.s 55
                     +V d+  g p ++ +V+v++ + ++      + a++ t+a+G+ +  ++p      g y+ ++ +
       EPX70870.1  9 HVLDTtRGVPAENISVSVSKiNHSNttlaqeQLATAITNANGRVSQWNVPLeevesGIYKFRFdT 73
                     7999846***********98433333344334699*******98866666544555777777752 PP

>> Big_1  Bacterial Ig-like domain (group 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   1.5     3e-05      0.13       9      49 ..       6      53 ..       2      54 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 3e-05
       Big_1  9 ltatvkDan.gnpvagatVtfsvsg.gals.....assgtTdanGkat 49
                +ta+v D   g p ++++V++s  + ++++      ++++T+anG+++
  EPX70870.1  6 FTAHVLDTTrGVPAENISVSVSKINhSNTTlaqeqLATAITNANGRVS 53
                6899999652677777777777666755557999999********985 PP

>> MRF_C2  Myelin gene regulatory factor C-terminal domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.0   0.00023         1      74     108 ..      37      71 ..      11      75 .. 0.77
   2 ?    1.4   0.0     0.061   2.8e+02      27      53 ..      74     100 ..      71     105 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00023
      MRF_C2  74 lsskeskstestqgtehlwslpvasfqesaYhFRv 108
                  +++  ++ ++ +g   +w++p+ +     Y+FR+
  EPX70870.1  37 AQEQLATAITNANGRVSQWNVPLEEVESGIYKFRF 71 
                 3444455566779999******************7 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.061
      MRF_C2  27 gnytysipiskytpnvsltlelnsses 53 
                 g y  s+ ++ + p v+lt+++n  + 
  EPX70870.1  74 GPYYDSLSMETFYPYVELTVNINKGQH 100
                 667788999999**********98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       521  (0.0290591); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.39u 0.28s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 852.22
//
Query:       EPX70871.1  [L=350]
Description: purine nucleoside transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.1e-116  389.4   0.7   1.3e-116  389.3   0.7    1.0  1  NUP       Purine nucleoside permease (NUP)


Domain annotation for each model (and alignments):
>> NUP  Purine nucleoside permease (NUP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  389.3   0.7  7.1e-121  1.3e-116       1     308 [.      32     349 ..      32     350 .] 0.95

  Alignments for each domain:
  == domain 1  score: 389.3 bits;  conditional E-value: 7.1e-121
         NUP   1 kvkvvivsmFegEaqawlerlk..laenitvpglsplypevhcnadgsvcqlvtGegeinaaasimaLvlsprFdLtktYfliaGiaGvnPkaatiGsv 97 
                 k+kv++vsmF++Ea+awl+  +  +a+ni+vpgl++l+pevhcn++++vcq++tGeg++naa+s++aL+lsp+FdL++t+f+i+GiaG+nP+aa+++sv
  EPX70871.1  32 KPKVMVVSMFAPEAEAWLNPWNdlYANNISVPGLNTLFPEVHCNTEQTVCQVTTGEGKSNAASSMTALTLSPKFDLSETFFIISGIAGINPYAASLASV 130
                 69******************99***************************************************************************** PP

         NUP  98 afaryavqvdlqyeidarelpk.....dwstgylplg..tke.pneyp.keiygtevfelneaLrdwAvelakkakLkdseeaaayrakYeyaaAqkpP 187
                  +a++av+vdl ++id relpk     +w+ ++ p+g  t++ +  yp + +y+t++++ln++L ++A+e+ k++ L+dse+aa+yr+kYe++aAq++P
  EPX70871.1 131 SIAKFAVDVDLVHTIDLRELPKsyqsaGWEIDTDPYGngTSNnEVVYPkSFNYQTNIYQLNNTLIEAALEIVKDVVLQDSEKAAEYRKKYEQPAAQRAP 229
                 *********************9777776665555554104442445888889*********************************************** PP

         NUP 188 svvkcdtltsdtywsGkllseaaenltkllTngtgtycttaqEdnatleallraakaglvDfsRvivlRtasnFdrpppgvsaleslleaeqggfeaal 286
                 ++++cdt+tsd+yw+G++++++a+n+t++lTn tg+yct++qEd+a+l+a++raa ++l +f+Rv+++R++s+Fdr  ++ sal++ll+++ + +  a 
  EPX70871.1 230 FILQCDTATSDNYWAGNYMGDFASNITNVLTNYTGHYCTSQQEDSASLTAIKRAADHELTNFNRVLLMRSGSDFDRGTESISALDNLLKDNGHTLGLAA 328
                 ****************************************************************************************9999999**** PP

         NUP 287 enlylaGsevveeivknWesty 308
                 +nly+aG ++v++iv+nW s +
  EPX70871.1 329 ANLYHAGRPLVDHIVNNW-SYW 349
                 ******************.655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (350 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       544  (0.0303419); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2485.67
//
Query:       EPX70872.1  [L=346]
Description: no message in thiamine Nmt1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.8e-74  248.9   0.0      6e-74  248.6   0.0    1.1  1  NMT1            NMT1/THI5 like
  ------ inclusion threshold ------
      0.013   15.1   0.0       0.02   14.5   0.0    1.2  1  Phosphonate-bd  ABC transporter, phosphonate, periplasmic sub
      0.041   13.6   0.0       0.21   11.3   0.0    2.0  2  NMT1_2          NMT1-like family


Domain annotation for each model (and alignments):
>> NMT1  NMT1/THI5 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  248.6   0.0     1e-77     6e-74       2     216 .]      16     237 ..      15     237 .. 0.99

  Alignments for each domain:
  == domain 1  score: 248.6 bits;  conditional E-value: 1e-77
                 GGGHHHHHHHHTTHHHHTTEEEEEE--SSTTHHHHHHHCTS-SEEEE-HHHHHHHHHTT--EEEEEEEE-S--EEEEEECCC--SSGGGGTTSEEEE-S CS
        NMT1   2 pnhaglyvAkekGYFkeeGldVeivepadpsdatelvasgkadfgvsyqesllaarakglpvvsvaallqeplsglivlkdsgikspkDLkGkrigyvg 100
                 p+h ++++A+++GYFk+eG++V+i+ep+dpsd+t+l++sgk+d+g+++++++laa+a+g+pv+s+++ll+ep++gli+lk++gik++kD+k krigyvg
  EPX70872.1  16 PYHLPIFIAQTRGYFKDEGIEVAILEPTDPSDVTALIGSGKVDMGLKAMIHTLAAKARGFPVTSFGSLLNEPFTGLITLKGNGIKDFKDIKNKRIGYVG 114
                 89************************************************************************************************* PP

                 -TTHHHHHHHHHHHTT--GGG-EEEE-.TT-HHHHHHCTSSSEEECEETTTHHHHHH..........HTT--EEEE-GGGTT-----SEEEEEEHHHHH CS
        NMT1 101 spfekallkallakdggdpsdvtlvnvggtslakalltgkvDaaiggyenwegvele..........segkelrifaladlgvpdyyslvlitnekllk 189
                  +f+k++l++l++k g++psd+t+v++ g++ a+a+++g++D +i g+e++++v+le          s+ ++lri+ la+lg+++++s+++i+++++++
  EPX70872.1 115 -EFGKIQLDDLCSKFGLSPSDYTAVRC-GMNIAPAIVSGEIDGGI-GIECMQQVQLErwcisqgrprSDVEMLRIDRLAELGCCCFCSILYIAHDDFIA 210
                 .9*************************.*****************.***************9999999999**************************** PP

                 H-HHHHHHHHHHHHHHHHHHHHSHHHH CS
        NMT1 190 enpelvkkFlrAlkkGyeyalahPeea 216
                 +np+++ +FlrA++ ++  +l++P +a
  EPX70872.1 211 KNPDKIVSFLRAIRSATLSMLENPIQA 237
                 ************************876 PP

>> Phosphonate-bd  ABC transporter, phosphonate, periplasmic substrate-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   3.4e-06      0.02      28     113 ..      34     115 ..      27     174 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 3.4e-06
                     SSEEEEE--SSHHHHHHHHHTTS-SEEE--HHHHHHHHHHS.-EEEEEEEEETT--SEEEEEEEEETTSS--SHHHHGG-EEEE--T CS
  Phosphonate-bd  28 GvevelvvatdyaavvealragqvDiaflgplayvqardqa.gveplatrvrsdGsasyrsviivradsdiqsledLkgktiafvsp 113
                     G+ev +   td ++v   + +g+vD+++   +++++a+++   v+ ++   +     + ++ +i+ ++++i+ ++d+k+k+i++v  
      EPX70872.1  34 GIEVAILEPTDPSDVTALIGSGKVDMGLKAMIHTLAAKARGfPVTSFGSLLN-----EPFTGLITLKGNGIKDFKDIKNKRIGYVGE 115
                     8899888899****************************99559999999997.....6677789999****************9875 PP

>> NMT1_2  NMT1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   3.4e-05      0.21      18      62 ..      18      62 ..      11      99 .. 0.84
   2 ?   -1.0   0.0       0.2   1.2e+03     212     235 ..     204     227 ..     198     237 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 3.4e-05
      NMT1_2 18 aaplvvakekglfakeGltvelekqaswaelrdkllagelDaahv 62
                + p+++a+++g+f++eG++v + + +  + +   + +g++D+++ 
  EPX70872.1 18 HLPIFIAQTRGYFKDEGIEVAILEPTDPSDVTALIGSGKVDMGLK 62
                78*****************99988888888888888999999865 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.2
      NMT1_2 212 vredfveknpntaralvkalleAt 235
                 ++ df++knp+    +++a+  At
  EPX70872.1 204 AHDDFIAKNPDKIVSFLRAIRSAT 227
                 6889***************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (346 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       303  (0.0169); expected 358.6 (0.02)
Passed bias filter:                      275  (0.0153383); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.46
# Mc/sec: 2253.45
//
Query:       EPX70873.1  [L=381]
Description: ribosomal protein lysine methyltransferase Set11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-15   56.9   0.0    6.5e-15   55.9   0.0    1.5  1  SET       SET domain


Domain annotation for each model (and alignments):
>> SET  SET domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.9   0.0   3.6e-19   6.5e-15       2     169 .]      35     224 ..      34     224 .. 0.90

  Alignments for each domain:
  == domain 1  score: 55.9 bits;  conditional E-value: 3.6e-19
                 CEEEESSXBXTTXEEEEEEECCEECHHHHHHHHHH.........................HTEEEEEXGGXXGGSX......HHHHHHHTTSSHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........................xxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxx RF
         SET   2 rGvfAtedIpkgeficeypeeiiltkdeadksele.........................aylfslpeapknlaft......kelakasastllqklak 69 
                  ++ +  +I+ ge+++++p++ +++k+++ +   +                         +y++ lp +    +++      ++    + +  +q+l  
  EPX70873.1  35 SCITSAGRIESGEVLLSLPRNVLINKATYPNCPFSkqlssfqflawfickgkstgmekwpYYIEALPQD---FSWHpvmlssNDPLWPNVPEDVQNLIL 130
                 57778889**********************999999***********************9999999944...45545555689999999********** PP

                 HHHHHHHHHHHHTHHHHHHHXTTTSXXXHCCCCCHCCCHEEEETEEEEEECCC.........GTTGGGCEEXSSSSEEEEEEEETTSSEEEEEESSXBX CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         SET  70 dqkqaekedtdaalkasskaesdlnaskpeagafsaiagysidaralksgnga.........gplarflNHsCdpNcnltvqnvlrgprvavfAtrdIk 159
                 + kq + ed+++  k +s           ++++ +++a++++++r+l++             +p+  ++NHs d +    +q+  +   + ++A r I+
  EPX70873.1 131 ERKQSLLEDYQNVSKFES-----------FDWQLFQWAWLCVNTRCLYYEVSPssvdeqltlAPVFEYFNHSFDAQT--DLQR--GRSGISIIAKRTIE 214
                 *********999988776...........55666***************************************7666..9999..99************ PP

                 TTEEEEEXTT CS
                 xxxxxxxxxx RF
         SET 160 kGeEltidYg 169
                 k+e++++ Yg
  EPX70873.1 215 KNEQIYLRYG 224
                 *********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (381 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       509  (0.0283898); expected 358.6 (0.02)
Passed bias filter:                      378  (0.0210832); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.30s 00:00:00.84 Elapsed: 00:00:00.50
# Mc/sec: 2307.94
//
Query:       EPX70874.1  [L=152]
Description: DASH complex subunit Spc19 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.7e-34  117.9   9.9    1.8e-33  115.7   9.9    1.8  1  DASH_Spc19   Spc19
     0.0012   18.8   3.6      0.038   14.1   2.7    2.4  2  Cep57_CLD_2  Centrosome localisation domain of PPC89
     0.0021   17.3   3.7     0.0034   16.6   3.7    1.3  1  DUF4686      Domain of unknown function (DUF4686)
  ------ inclusion threshold ------
      0.023   14.2   0.3      0.031   13.7   0.3    1.2  1  AviRa        RRNA methyltransferase AviRa
      0.057   13.8   0.2        4.2    7.8   0.0    2.6  2  FlaC_arch    Flagella accessory protein C (FlaC)
      0.077   13.4   0.9       0.24   11.8   1.1    1.8  2  DUF4140      N-terminal domain of unknown function (DUF4140)
      0.081   12.7   4.0       0.57   10.0   1.5    2.7  3  DivIC        Septum formation initiator
       0.17   11.8   6.0        2.8    7.9   0.0    3.2  3  Prefoldin    Prefoldin subunit
        1.9    8.2   6.8        2.5    7.8   2.7    2.6  2  LXG          LXG domain of WXG superfamily


Domain annotation for each model (and alignments):
>> DASH_Spc19  Spc19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.7   9.9     9e-37   1.8e-33       1     156 [.       7     141 ..       7     142 .. 0.91

  Alignments for each domain:
  == domain 1  score: 115.7 bits;  conditional E-value: 9e-37
                 .HHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHH-------TTTHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  DASH_Spc19   1 LencvsSLrssvslLqssietLdsgvsdfprlkkvLkttrvFeLipesdleaakaslaeeiePqieellekaekeleklerreetLkaklelqegrlsn 99 
                 Le+cv+SL++s+ +L+ssi tLdsg++dfpr+k+++k +r+F+Li+e+ l+++++++ e+i+P +   ++k+e++++ l+r+e++L++k+elqe rl+ 
  EPX70874.1   7 LEQCVNSLQTSIDTLSSSIVTLDSGIHDFPRIKQIIKVQRHFHLISEQQLQDRRKKFDESIKPYLLRAFQKLEESISALQRQEDSLRTKYELQEARLDM 105
                 89************************************************************************************************* PP

                 ......HHHHT-XXXXXXXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  DASH_Spc19 100 aesskkeeeeseeskeeeeeeenkeeekskkkltkeelerlkkLkqkKerLkytler 156
                  +++   ++   +s++                      ++lk   +k+++L ytler
  EPX70874.1 106 LKNRPPISALPLNSDT---------------------TDQLKITIAKRQKLLYTLER 141
                 7666665555555555.....................47888888888888888887 PP

>> Cep57_CLD_2  Centrosome localisation domain of PPC89
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.046        92       1      18 [.       7      24 ..       7      32 .. 0.88
   2 !   14.1   2.7   1.9e-05     0.038       1      64 [.      78     149 ..      78     151 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.046
  Cep57_CLD_2  1 LeaevktLqnrLdsltrk 18
                 Le+ v++Lq+  d l++ 
   EPX70874.1  7 LEQCVNSLQTSIDTLSSS 24
                 8999*********99875 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 1.9e-05
  Cep57_CLD_2   1 LeaevktLqnrLdsltrklqvheeelkrLnk........ERdsalrqLgvAyeelneLkaevealrkELkeq 64 
                  Le  +++Lq + dsl++k++ +e  l++L +        +++    qL + +   ++L   +e+ + +L+ +
   EPX70874.1  78 LEESISALQRQEDSLRTKYELQEARLDMLKNrppisalpLNSDTTDQLKITIAKRQKLLYTLERYDLQLRQK 149
                  8999*************************9988999998899999999888888888888888887777766 PP

>> DUF4686  Domain of unknown function (DUF4686)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   3.7   1.7e-06    0.0034     184     269 ..       7     104 ..       5     108 .. 0.76

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.7e-06
     DUF4686 184 LdqnveeLqqqvrslrdkeaqlert.....nsqqqlriqqqeaql..kklenekrksdehl.....ksnqeLsekLsslqqekealqeelqqvLkqld 269
                 L+q v+ Lq+ + +l +   +l+         +q +++q +  ++  ++l++ ++k de +     ++ q+L+e +s+lq+  ++l+++++     ld
  EPX70874.1   7 LEQCVNSLQTSIDTLSSSIVTLDSGihdfpRIKQIIKVQRHFHLIseQQLQDRRKKFDESIkpyllRAFQKLEESISALQRQEDSLRTKYELQEARLD 104
                 677788888888888777666655411111456778999887776336799999999**999999999**********************97665555 PP

>> AviRa  RRNA methyltransferase AviRa
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.3   1.6e-05     0.031      96     163 ..      45     112 ..      36     129 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.6e-05
       AviRa  96 kkNLsLLtkeglakreeelrelaeeyekeshaealesaerleellakkgeekeievfkaditekeeea 163
                 ++ ++L++++ l++r+++  e+ + y  +++++  es++ l+++ ++  ++ e++ ++ d+++++++ 
  EPX70874.1  45 QRHFHLISEQQLQDRRKKFDESIKPYLLRAFQKLEESISALQRQEDSLRTKYELQEARLDMLKNRPPI 112
                 67789****************************************9999************9888775 PP

>> FlaC_arch  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.0    0.0021       4.2       3      31 ..       5      33 ..       3      44 .. 0.75
   2 ?    3.4   0.1     0.052     1e+02      10      31 ..      76      97 ..      73     109 .. 0.62

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0021
   FlaC_arch  3 delEnklsklsteletvkkeneelsksve 31
                d lE+ +++l+t+++t+ +++  l + ++
  EPX70874.1  5 DGLEQCVNSLQTSIDTLSSSIVTLDSGIH 33
                67899999999999998888777766665 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.052
   FlaC_arch 10 sklsteletvkkeneelsksve 31
                +kl+ +++ ++++ ++l+++ e
  EPX70874.1 76 QKLEESISALQRQEDSLRTKYE 97
                5666777777777766666543 PP

>> DUF4140  N-terminal domain of unknown function (DUF4140)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       3.4   6.9e+03      81      92 ..      11      22 ..       4      31 .. 0.47
   2 ?   11.8   1.1   0.00012      0.24      55      98 .]      55     106 ..      42     106 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 3.4
     DUF4140 81 laaledelaaae 92
                 + l+ ++++++
  EPX70874.1 11 VNSLQTSIDTLS 22
                333333333333 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 0.00012
     DUF4140  55 ervpnreaeee........elkalraeleeledelaaledelaaaearlafl 98 
                 + + +r++++e        + ++l++++ +l+++ + l+ + +  earl++l
  EPX70874.1  55 QLQDRRKKFDEsikpyllrAFQKLEESISALQRQEDSLRTKYELQEARLDML 106
                 45677888888999999977****************************9986 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.14   2.9e+02      24      45 ..       9      30 ..       4      49 .. 0.56
   2 ?    0.9   0.0       0.2   3.9e+02       9      45 ..      25      65 ..      21      70 .. 0.60
   3 ?   10.0   1.5   0.00029      0.57      16      53 ..      72     109 ..      68     112 .. 0.90

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.14
                HHHHHHHHHHHHHHHHHHHHHH CS
       DivIC 24 qeiaalqaelaklkaeneeLea 45
                q ++ lq  +++l+  +  L++
  EPX70874.1  9 QCVNSLQTSIDTLSSSIVTLDS 30
                4444555555555544444443 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.2
                XXXXXXXXXHHHHHHHHHHHHHH....HHHHHHHHHHHHHH CS
       DivIC  9 lifgkkgllaykqlkqeiaalqa....elaklkaeneeLea 45
                ++++++g++++ ++kq i+ + +      ++l++++++ ++
  EPX70874.1 25 IVTLDSGIHDFPRIKQIIKVQRHfhliSEQQLQDRRKKFDE 65
                56777777777777776665554333345666666666555 PP

  == domain 3  score: 10.0 bits;  conditional E-value: 0.00029
                 XXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-XXX CS
       DivIC  16 llaykqlkqeiaalqaelaklkaeneeLeaevkdLksd 53 
                 l+a+++l++ i alq++ ++l+ + e  ea+++ Lk+ 
  EPX70874.1  72 LRAFQKLEESISALQRQEDSLRTKYELQEARLDMLKNR 109
                 7899***************************9999875 PP

>> Prefoldin  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.0    0.0014       2.8       4      31 ..       3      30 ..       1      45 [. 0.88
   2 ?    3.7   1.1     0.029        57      82     117 ..      71     106 ..      59     109 .. 0.62
   3 ?    1.4   0.1      0.14   2.8e+02       9      34 ..     119     144 ..     113     151 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0014
                HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Prefoldin  4 eleslqaelaqlkeaieelektletlkt 31
                +l+ l++++++l+++i++l +++ tl++
  EPX70874.1  3 YLDGLEQCVNSLQTSIDTLSSSIVTLDS 30
                6888999***************999987 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.029
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Prefoldin  82 lkkkleelekqlekleeeleklkdqittleanlaql 117
                 l +  ++le+++  l+ + + l+++++  ea l++l
  EPX70874.1  71 LLRAFQKLEESISALQRQEDSLRTKYELQEARLDML 106
                 555566666666666666666666666666655554 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.14
                 HHHHHHHHHHHHHHHHHHHHHHHHTT CS
   Prefoldin   9 qaelaqlkeaieelektletlktlkk 34 
                  ++++qlk +i + +k+l tl++++ 
  EPX70874.1 119 SDTTDQLKITIAKRQKLLYTLERYDL 144
                 57899****************99875 PP

>> LXG  LXG domain of WXG superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   2.7    0.0012       2.5     128     183 ..      52     107 ..       7     109 .. 0.72
   2 ?    0.0   0.1      0.29   5.8e+02     141     169 ..     119     147 ..     113     149 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0012
         LXG 128 svsdivslpelddsevkdslqkakkkvqetiekledfdqeqksalanlesdlkalk 183
                 s +++ +  +  d+++k +l +a +k++e i +l++ + ++ ++++ +e+ l++lk
  EPX70874.1  52 SEQQLQDRRKKFDESIKPYLLRAFQKLEESISALQRQEDSLRTKYELQEARLDMLK 107
                 4455555566778999999******************************9999987 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.29
         LXG 141 sevkdslqkakkkvqetiekledfdqeqk 169
                 s+ +d+l+  + k+q+ +  le++d ++ 
  EPX70874.1 119 SDTTDQLKITIAKRQKLLYTLERYDLQLR 147
                 45689999999999999999999998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1204  (0.0671538); expected 358.6 (0.02)
Passed bias filter:                      570  (0.0317921); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1075.09
//
Query:       EPX70875.1  [L=90]
Description: 60S ribosomal protein L37 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.2e-27   93.1  13.7    8.2e-27   93.1  13.7    1.6  2  Ribosomal_L37e  Ribosomal protein L37e
  ------ inclusion threshold ------
      0.015   15.4   2.1      0.022   14.7   2.1    1.2  1  DZR             Double zinc ribbon
       0.12   12.4   1.4       0.16   12.0   1.4    1.2  1  HypA            Hydrogenase/urease nickel incorporation, meta
       0.13   11.7   2.8       0.32   10.5   2.8    1.6  1  zf-ribbon_3     zinc-ribbon domain
       0.16   11.9   3.5       0.29   11.1   3.5    1.4  1  DUF35_N         Rubredoxin-like zinc ribbon domain (DUF35_N)
       0.19   11.6   2.5       0.33   10.8   2.5    1.4  1  zf-C3HC4_2      Zinc finger, C3HC4 type (RING finger)
       0.75    9.4   5.0        2.2    7.9   0.6    2.3  2  zn-ribbon_14    Zinc-ribbon
       0.98    9.4   5.4        1.5    8.8   5.4    1.3  1  zf-C3HC4        Zinc finger, C3HC4 type (RING finger)
        1.4    8.4   5.5        3.9    7.0   2.7    2.1  2  DUF2688         Protein of unknown function (DUF2688)


Domain annotation for each model (and alignments):
>> Ribosomal_L37e  Ribosomal protein L37e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.1  13.7   4.1e-30   8.2e-27       1      54 []       2      54 ..       2      54 .. 0.98
   2 ?   -2.2   0.1       2.4   4.8e+03       4      14 ..      58      68 ..      58      72 .. 0.70

  Alignments for each domain:
  == domain 1  score: 93.1 bits;  conditional E-value: 4.1e-30
  Ribosomal_L37e  1 tkGtssfGkrqkkktHilCrrCgkrsyhvqkktCascGypsaklrkynWsaKak 54
                    tkGt+s+Gkr  +k+H+lCrrCgkrs+h qk+tCascGypsak+r++nW+aKak
      EPX70875.1  2 TKGTTSMGKR-GNKSHTLCRRCGKRSFHKQKSTCASCGYPSAKTRSFNWGAKAK 54
                    8*********.999**************************************96 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 2.4
  Ribosomal_L37e  4 tssfGkrqkkk 14
                    t+  G++q+ k
      EPX70875.1 58 TTGTGRMQHMK 68
                    56678888776 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   2.1   1.1e-05     0.022      11      43 ..      15      46 ..       9      48 .. 0.73

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.1e-05
         DZR 11 darfCseCgtklkavaaedrCpsCgekvdpear 43
                +   C +Cg++    +++ +C sCg++  ++ +
  EPX70875.1 15 SHTLCRRCGKRSF-HKQKSTCASCGYPSAKTRS 46
                5568999999964.4668999999998766655 PP

>> HypA  Hydrogenase/urease nickel incorporation, metallochaperone, hypA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   1.4   8.2e-05      0.16      69      98 ..      15      43 ..       6      48 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 8.2e-05
                -EEEETTTS-EEECHHHHHS-TTTSSS-EE CS
        HypA 69 vkvrCreCgkefeleekalrCpkCgsadve 98
                 ++ Cr+Cgk+  +++k  +C +Cg  + +
  EPX70875.1 15 SHTLCRRCGKRSFHKQK-STCASCGYPSAK 43
                6789*****99887754.68****987665 PP

>> zf-ribbon_3  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   2.8   0.00016      0.32       5      25 ..      19      40 ..      15      40 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00016
  zf-ribbon_3  5 CPnCGa.plssddnvCpyCGtk 25
                 C +CG+    ++ ++C++CG++
   EPX70875.1 19 CRRCGKrSFHKQKSTCASCGYP 40
                 779****99***********96 PP

>> DUF35_N  Rubredoxin-like zinc ribbon domain (DUF35_N)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   3.5   0.00014      0.29      14      32 ..      19      38 ..      17      39 .. 0.95

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00014
     DUF35_N 14 CpdCGtvqfPPr.avCphCg 32
                C+ CG+  f ++   C  Cg
  EPX70875.1 19 CRRCGKRSFHKQkSTCASCG 38
                *******************8 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   2.5   0.00016      0.33      20      40 .]      16      37 ..      11      41 .. 0.93

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00016
  zf-C3HC4_2 20 HvfCqkCilrsLeekn.eCPlC 40
                H+ C+ C +rs ++++  C  C
  EPX70875.1 16 HTLCRRCGKRSFHKQKsTCASC 37
                ***********9999989*888 PP

>> zn-ribbon_14  Zinc-ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.3     0.024        49       3       8 ..      19      24 ..      17      29 .. 0.79
   2 ?    7.9   0.6    0.0011       2.2       2      10 ..      33      41 ..      32      44 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.024
  zn-ribbon_14  3 CerCGy 8 
                  C+rCG 
    EPX70875.1 19 CRRCGK 24
                  ****96 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0011
  zn-ribbon_14  2 kCerCGylS 10
                  +C  CGy S
    EPX70875.1 33 TCASCGYPS 41
                  8******99 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   5.4   0.00075       1.5      19      41 .]      16      37 ..      15      37 .. 0.95

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00075
                --B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4 19 HsfCskCirkilksrkkvkCPlC 41
                H++C+ C ++    ++k +C  C
  EPX70875.1 16 HTLCRRCGKRSFH-KQKSTCASC 37
                *************.99999***9 PP

>> DUF2688  Protein of unknown function (DUF2688)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   2.7    0.0019       3.9       8      16 ..      17      25 ..      14      33 .. 0.78
   2 ?    2.4   0.1     0.053   1.1e+02       9      31 ..      33      55 ..      30      61 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0019
     DUF2688  8 TqCrRCGks 16
                T CrRCGk 
  EPX70875.1 17 TLCRRCGKR 25
                88*****95 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.053
     DUF2688  9 qCrRCGkslstlsrSLlGldeLk 31
                 C  CG +  +++    G+ + +
  EPX70875.1 33 TCASCGYPSAKTRSFNWGAKAKR 55
                6999***9999987777776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       671  (0.0374254); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.39u 0.30s 00:00:00.69 Elapsed: 00:00:00.45
# Mc/sec: 595.43
//
Query:       EPX70876.1  [L=1122]
Description: cell end marker Tea1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-46  156.5   9.0    1.7e-13   50.3   0.0    6.5  6  Kelch_4   Galactose oxidase, central domain
    3.2e-37  126.1  10.1    2.7e-09   37.1   0.0    6.8  6  Kelch_3   Galactose oxidase, central domain
    6.8e-35  118.5   9.5      2e-07   30.8   0.0    6.5  6  Kelch_5   Kelch motif
    6.6e-31  105.6  10.3    5.3e-09   36.1   0.2    6.6  6  Kelch_6   Kelch motif
    6.7e-30  102.4   0.9    1.2e-09   37.6   0.2    6.2  6  Kelch_1   Kelch motif
    1.3e-28   97.9   3.0    5.1e-06   26.3   0.1    5.7  5  Kelch_2   Kelch motif
  ------ inclusion threshold ------
      0.076   13.3   0.2      0.076   13.3   0.2    2.3  2  Imm7      Immunity protein 7
        1.3    9.2   4.1       0.98    9.6   0.3    2.9  3  MCD_N     Malonyl-CoA decarboxylase N-terminal domain


Domain annotation for each model (and alignments):
>> Kelch_4  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.0   8.5e-10   1.9e-06       1      47 [.      79     130 ..      79     132 .. 0.85
   2 !   18.9   0.0   5.1e-07    0.0011       1      45 [.     133     182 ..     133     186 .. 0.84
   3 !   17.8   0.1   1.1e-06    0.0024       2      41 ..     188     226 ..     187     241 .. 0.79
   4 !   29.0   0.0   3.4e-10   7.6e-07       1      48 [.     242     291 ..     242     292 .. 0.90
   5 !   50.3   0.0   7.8e-17   1.7e-13       1      46 [.     292     341 ..     292     343 .. 0.89
   6 !   14.8   0.0   9.4e-06     0.021       1      37 [.     343     378 ..     343     389 .. 0.92

  Alignments for each domain:
  == domain 1  score: 27.8 bits;  conditional E-value: 8.5e-10
     Kelch_4   1 pRaghsatsi..pdgtiylfGGrgedgtllndlylldlstntWrrl...gsl 47 
                 pR +hs+     ++ ++y+fGG++++  + ndl++l+l+t +++ l   g+ 
  EPX70876.1  79 PRYSHSSHHFaeGGQEVYVFGGISSNSDAKNDLWVLNLATSQFSNLrstGQI 130
                 89********76668*************************988766544555 PP

  == domain 2  score: 18.9 bits;  conditional E-value: 5.1e-07
     Kelch_4   1 pRaghsatsipdgtiylfGGrgedg...tllndlylldlstntWrrl...g 45 
                 pR gh+++  + + +++fGG +++       n lyll++s+ +W++    g
  EPX70876.1 133 PRLGHASVLAG-NAFIVFGGLTNKEdidYQDNTLYLLNTSSLRWQKAsvsG 182
                 8*********7.67777*******99*7777778**********9974444 PP

  == domain 3  score: 17.8 bits;  conditional E-value: 1.1e-06
     Kelch_4   2 RaghsatsipdgtiylfGGrgedgtllndlylldl.stntW 41 
                 R gh++  ++  +++lfGGr  d   +ndl ++dl + nt 
  EPX70876.1 188 RYGHTLSTLG-SRVWLFGGRLLD-YYFNDLVFFDLnKLNTQ 226
                 99*******6.7**********9.7********99444444 PP

  == domain 4  score: 29.0 bits;  conditional E-value: 3.4e-10
     Kelch_4   1 pRaghsatsipdgtiylfGGrgedgtllndlylldlstntWrrl....gslP 48 
                 +Ragh+a+s  ++++y++GG  ++ t +nd++ +  ++  W+++     ++P
  EPX70876.1 242 ARAGHVAISY-SDKLYIIGGTDGQ-TYYNDVWCFHPKQSAWSKVetfgHPPP 291
                 7*********.79**********9.9******************99974444 PP

  == domain 5  score: 50.3 bits;  conditional E-value: 7.8e-17
     Kelch_4   1 pRaghsatsipdgtiylfGGrgedgtllndlylldlstntWrrl.....gs 46 
                 pRaghsa  i d+ +y+fGGr++dg++lndly+l +st++W rl     ++
  EPX70876.1 292 PRAGHSASII-DDVVYVFGGRSSDGAFLNDLYALKISTKQWYRLldlpfAP 341
                 9*********.69****************************7775666544 PP

  == domain 6  score: 14.8 bits;  conditional E-value: 9.4e-06
     Kelch_4   1 pRaghsatsipdgtiylfGGrgedgtllndlylldls 37 
                 pR +h++ts++  t++l+GG ++++ + +++y ld++
  EPX70876.1 343 PRSSHTLTSTG-LTLVLIGGKQAKDVIDSNVYMLDVT 378
                 8*********6.*************999999999986 PP

>> Kelch_3  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.7   0.1   2.9e-11   6.5e-08       2      48 ..      93     141 ..      92     142 .. 0.87
   2 !   21.3   0.1     1e-07   0.00023       1      47 [.     143     194 ..     143     196 .. 0.86
   3 !    8.9   0.0   0.00086       1.9       1      44 [.     197     246 ..     197     249 .. 0.77
   4 !   37.1   0.0   1.2e-12   2.7e-09       2      48 ..     253     300 ..     252     301 .. 0.93
   5 !   26.6   0.0   2.3e-09   5.1e-06       2      47 ..     303     350 ..     302     351 .. 0.90
   6 ?   -1.0   0.0         1   2.3e+03       3      26 ..     355     377 ..     353     379 .. 0.78

  Alignments for each domain:
  == domain 1  score: 32.7 bits;  conditional E-value: 2.9e-11
     Kelch_3   2 drlyifGGlgddgqdrlndvyvydldtntWaei...aslppaRaghaata 48 
                  ++y+fGG   ++ d+ nd++v++l+t ++ ++   ++ p++R gha+++
  EPX70876.1  93 QEVYVFGGIS-SNSDAKNDLWVLNLATSQFSNLrstGQIPSPRLGHASVL 141
                 689*******.999999***********7775555599*********975 PP

  == domain 2  score: 21.3 bits;  conditional E-value: 1e-07
     Kelch_3   1 gdrlyifGGlgddgqdrl...ndvyvydldtntWaei...aslppaRaghaat 47 
                 g+ + +fGGl+ + +d +   n++y++++++  W++    +  p++R+gh+++
  EPX70876.1 143 GNAFIVFGGLT-NKEDIDyqdNTLYLLNTSSLRWQKAsvsGARPSGRYGHTLS 194
                 7899*******.33444489***************8878999*********98 PP

  == domain 3  score: 8.9 bits;  conditional E-value: 0.00086
     Kelch_3   1 gdrlyifGGlgddgqdrl.ndvyvydldtntWaei........aslppaRagh 44 
                 g r+++fGG+     d++ nd+  +dl++ + +e+         ++ppaRagh
  EPX70876.1 197 GSRVWLFGGRLL---DYYfNDLVFFDLNKLNTQESrwelasvvNDPPPARAGH 246
                 5789*******5...4446999999999997776665664556668******9 PP

  == domain 4  score: 37.1 bits;  conditional E-value: 1.2e-12
     Kelch_3   2 drlyifGGlgddgqdrlndvyvydldtntWaei...aslppaRaghaata 48 
                 d+lyi+GG +  gq+++ndv+ + +    W ++   + +pp+Ragh+a+ 
  EPX70876.1 253 DKLYIIGGTD--GQTYYNDVWCFHPKQSAWSKVetfGHPPPPRAGHSASI 300
                 89********..*************9999*98877999*********996 PP

  == domain 5  score: 26.6 bits;  conditional E-value: 2.3e-09
     Kelch_3   2 drlyifGGlgddg.qdrlndvyvydldtntWaei...aslppaRaghaat 47 
                 d +y+fGG+   + + +lnd+y++ ++t +W ++   +  p++R++h++t
  EPX70876.1 303 DVVYVFGGRS--SdGAFLNDLYALKISTKQWYRLldlPFAPSPRSSHTLT 350
                 789*******..55******************99666667********98 PP

  == domain 6  score: -1.0 bits;  conditional E-value: 1
     Kelch_3   3 rlyifGGlgddgqdrl.ndvyvydl 26 
                 +l+++GG+     d+  ++vy++d+
  EPX70876.1 355 TLVLIGGKQ--AKDVIdSNVYMLDV 377
                 689999999..65555699999997 PP

>> Kelch_5  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.1   1.5e-08   3.4e-05       4      41 ..      79     118 ..      78     119 .. 0.85
   2 !   12.3   0.0   5.9e-05      0.13       1      39 [.     130     170 ..     130     173 .. 0.78
   3 !   15.8   0.1   4.7e-06     0.011       2      39 ..     185     220 ..     185     222 .. 0.92
   4 !   26.9   0.2   1.5e-09   3.4e-06       2      35 ..     240     271 ..     239     277 .. 0.93
   5 !   30.8   0.0     9e-11     2e-07       2      37 ..     290     324 ..     289     330 .. 0.92
   6 !    9.4   0.0   0.00045         1       2      40 ..     341     378 ..     340     380 .. 0.91

  Alignments for each domain:
  == domain 1  score: 23.7 bits;  conditional E-value: 1.5e-08
     Kelch_5   4 pRaghcavtv...sekiYvyGGkvgrdgsvsddvyvLdlps 41 
                 pR++h++      ++++Yv+GG+++ ++++ +d++vL+l +
  EPX70876.1  79 PRYSHSSHHFaegGQEVYVFGGISS-NSDAKNDLWVLNLAT 118
                 89999997543445**********7.************976 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 5.9e-05
     Kelch_5   1 iPppRaghcavtvsekiYvyGGkvg.rdgsvs.ddvyvLdl 39 
                 iP+pR gh++v +++  +v+GG +  +d ++  + +y L++
  EPX70876.1 130 IPSPRLGHASVLAGNAFIVFGGLTNkEDIDYQdNTLYLLNT 170
                 7**********************944343333367777776 PP

  == domain 3  score: 15.8 bits;  conditional E-value: 4.7e-06
     Kelch_5   2 PppRaghcavtvsekiYvyGGkvgrdgsvsddvyvLdl 39 
                 P++R+gh   t+++ ++++GG+    + +++d+  +dl
  EPX70876.1 185 PSGRYGHTLSTLGSRVWLFGGRLL--DYYFNDLVFFDL 220
                 999********************7..******987777 PP

  == domain 4  score: 26.9 bits;  conditional E-value: 1.5e-09
     Kelch_5   2 PppRaghcavtvsekiYvyGGkvgrdgsvsddvy 35 
                 Pp+Ragh a+ +s+k+Y++GG +g  + +++dv+
  EPX70876.1 240 PPARAGHVAISYSDKLYIIGGTDG--QTYYNDVW 271
                 9**********************6..******** PP

  == domain 5  score: 30.8 bits;  conditional E-value: 9e-11
     Kelch_5   2 PppRaghcavtvsekiYvyGGkvgrdgsvsddvyvL 37 
                 PppRagh+a + ++ +Yv+GG+++ dg + +d+y L
  EPX70876.1 290 PPPRAGHSASIIDDVVYVFGGRSS-DGAFLNDLYAL 324
                 9**********************7.*********88 PP

  == domain 6  score: 9.4 bits;  conditional E-value: 0.00045
     Kelch_5   2 PppRaghcavtvsekiYvyGGkvgrdgsvsddvyvLdlp 40 
                 P+pR++h     +  + ++GGk++  + + ++vy Ld++
  EPX70876.1 341 PSPRSSHTLTSTGLTLVLIGGKQA-KDVIDSNVYMLDVT 378
                 899999999999999********7.9999********97 PP

>> Kelch_6  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.1     7e-06     0.016       2      49 ..      80     133 ..      79     134 .. 0.71
   2 !   16.9   0.0   2.5e-06    0.0056       1      42 [.     133     177 ..     133     181 .. 0.94
   3 !   14.4   0.0   1.6e-05     0.036       2      36 ..     188     221 ..     188     240 .. 0.85
   4 !   36.1   0.2   2.4e-12   5.3e-09       1      48 [.     242     288 ..     242     291 .. 0.92
   5 !   22.6   0.0   4.2e-08   9.4e-05       1      43 [.     292     334 ..     292     344 .. 0.86
   6 ?    2.5   0.0     0.085   1.9e+02       1      24 [.     343     371 ..     343     384 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 7e-06
     Kelch_6   2 raghslvsvg.g..kiYifGGytdsspylnkvwvydpetksWeql...pplpvp 49 
                 r++hs+     g   +Y+fGG +  s + n++wv+++ t  ++ l   +++p p
  EPX70876.1  80 RYSHSSHHFAeGgqEVYVFGGISSNSDAKNDLWVLNLATSQFSNLrstGQIPSP 133
                 677777553312236*******877**************998876222356665 PP

  == domain 2  score: 16.9 bits;  conditional E-value: 2.5e-06
     Kelch_6   1 praghslvsvggkiYifGGytds...spylnkvwvydpetksWeq 42 
                 pr+gh++v++g+ + +fGG+t+    +   n +++++ ++ +W++
  EPX70876.1 133 PRLGHASVLAGNAFIVFGGLTNKediDYQDNTLYLLNTSSLRWQK 177
                 799***********************8888*************97 PP

  == domain 3  score: 14.4 bits;  conditional E-value: 1.6e-05
     Kelch_6   2 raghslvsvggkiYifGGytdsspylnkvwvydpe 36 
                 r+gh+l + g+++++fGG+   + y+n++ ++d+ 
  EPX70876.1 188 RYGHTLSTLGSRVWLFGGRLL-DYYFNDLVFFDLN 221
                 789****************99.9**********64 PP

  == domain 4  score: 36.1 bits;  conditional E-value: 2.4e-12
     Kelch_6   1 praghslvsvggkiYifGGytdsspylnkvwvydpetksWeqlpplpv 48 
                 +ragh ++s+ +k+Yi+GG ++  +y+n+vw+++p+   W++++ + +
  EPX70876.1 242 ARAGHVAISYSDKLYIIGGTDG-QTYYNDVWCFHPKQSAWSKVETFGH 288
                 599******************9.6******************987655 PP

  == domain 5  score: 22.6 bits;  conditional E-value: 4.2e-08
     Kelch_6   1 praghslvsvggkiYifGGytdsspylnkvwvydpetksWeql 43 
                 praghs+ ++++ +Y+fGG++ ++ +ln+++ + ++tk W +l
  EPX70876.1 292 PRAGHSASIIDDVVYVFGGRSSDGAFLNDLYALKISTKQWYRL 334
                 799******************99*****************985 PP

  == domain 6  score: 2.5 bits;  conditional E-value: 0.085
     Kelch_6   1 praghslvsvggkiYifGGytds.....s 24 
                 pr +h+l+s g +++++GG  +      +
  EPX70876.1 343 PRSSHTLTSTGLTLVLIGGKQAKdvidsN 371
                 6899***************9885555544 PP

>> Kelch_1  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   2.9e-07   0.00066       5      44 ..      86     126 ..      82     128 .. 0.90
   2 ?    4.5   0.0     0.011        26       1      42 [.     133     178 ..     133     179 .. 0.87
   3 ?    1.8   0.0     0.083   1.9e+02       2      20 ..     188     206 ..     187     207 .. 0.94
   4 !   37.6   0.2   5.4e-13   1.2e-09       1      43 [.     242     284 ..     242     287 .. 0.95
   5 !   30.4   0.0   9.7e-11   2.2e-07       1      42 [.     292     334 ..     292     338 .. 0.96
   6 ?    0.9   0.0      0.15   3.3e+02       1      34 [.     343     377 ..     343     379 .. 0.90

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 2.9e-07
                 EEEEEETTEEEEEEEBCS.SSBEEEEEEEETTTTEEEEECC CS
     Kelch_1   5 agavvvggkiYviGGsdg.gnalssvevyDpetntWrelps 44 
                 + ++  g ++Yv+GG ++ + a ++++v+++ t +++ l s
  EPX70876.1  86 HHFAEGGQEVYVFGGISSnSDAKNDLWVLNLATSQFSNLRS 126
                 66778899***************************999876 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.011
                 BBBSEEEEEETTEEEEEEEBCS....SSBEEEEEEEETTTTEEEEE CS
     Kelch_1   1 aragagavvvggkiYviGGsdg....gnalssvevyDpetntWrel 42 
                 +r g+++v  g+   v+GG  +        ++++ +++ +  W ++
  EPX70876.1 133 PRLGHASVLAGNAFIVFGGLTNkediDYQDNTLYLLNTSSLRWQKA 178
                 799*****************99999988888888888888888765 PP

  == domain 3  score: 1.8 bits;  conditional E-value: 0.083
                 BBSEEEEEETTEEEEEEEB CS
     Kelch_1   2 ragagavvvggkiYviGGs 20 
                 r+g++  ++g ++  +GG+
  EPX70876.1 188 RYGHTLSTLGSRVWLFGGR 206
                 9*****************6 PP

  == domain 4  score: 37.6 bits;  conditional E-value: 5.4e-13
                 BBBSEEEEEETTEEEEEEEBCSSSBEEEEEEEETTTTEEEEEC CS
     Kelch_1   1 aragagavvvggkiYviGGsdggnalssvevyDpetntWrelp 43 
                 arag++a +  +k+Y+iGG dg+++ ++v+++ p++  W+++ 
  EPX70876.1 242 ARAGHVAISYSDKLYIIGGTDGQTYYNDVWCFHPKQSAWSKVE 284
                 69**************************************985 PP

  == domain 5  score: 30.4 bits;  conditional E-value: 9.7e-11
                 BBBSEEEEEETTEEEEEEEBCS.SSBEEEEEEEETTTTEEEEE CS
     Kelch_1   1 aragagavvvggkiYviGGsdg.gnalssvevyDpetntWrel 42 
                 +rag++a  +++ +Yv+GG+++ g +l++++++   t++W +l
  EPX70876.1 292 PRAGHSASIIDDVVYVFGGRSSdGAFLNDLYALKISTKQWYRL 334
                 7***************************************986 PP

  == domain 6  score: 0.9 bits;  conditional E-value: 0.15
                 BBBSEEEEEETTEEEEEEEBCS.SSBEEEEEEEET CS
     Kelch_1   1 aragagavvvggkiYviGGsdg.gnalssvevyDp 34 
                 +r+ ++ ++ g  +  iGG        s+v+++D+
  EPX70876.1 343 PRSSHTLTSTGLTLVLIGGKQAkDVIDSNVYMLDV 377
                 7999999************9999999999999996 PP

>> Kelch_2  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   4.1e-06    0.0092       5      45 ..      86     124 ..      79     127 .. 0.89
   2 ?    5.0   0.0     0.011        25       1      20 [.     133     152 ..     133     177 .. 0.81
   3 !   26.3   0.1   2.3e-09   5.1e-06       1      46 [.     187     234 ..     187     237 .. 0.95
   4 !   20.4   0.1   1.6e-07   0.00035       1      45 [.     242     283 ..     242     285 .. 0.96
   5 !   25.7   0.0   3.4e-09   7.5e-06       1      45 [.     292     334 ..     292     338 .. 0.95

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 4.1e-06
     Kelch_2   5 hsssvpggkiyvvGGahtdnpnlsssdvhvldlekhvWeev 45 
                 h ++ +g+ +yv+GG+  + ++++ +d++vl+l + +++++
  EPX70876.1  86 HHFAEGGQEVYVFGGI--SSNSDAKNDLWVLNLATSQFSNL 124
                 5578889*********..*******************9875 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.011
     Kelch_2   1 rrgghsssvpggkiyvvGGa 20 
                 +r gh+s+  g+  +v+GG 
  EPX70876.1 133 PRLGHASVLAGNAFIVFGGL 152
                 689****************9 PP

  == domain 3  score: 26.3 bits;  conditional E-value: 2.3e-09
     Kelch_2   1 rrgghsssvpggkiyvvGGa..htdnpnlsssdvhvldlekhvWeevt 46 
                 +r+gh+ s++g+++ ++GG+  +++ ++l+++d++ l++++ +We+ +
  EPX70876.1 187 GRYGHTLSTLGSRVWLFGGRllDYYFNDLVFFDLNKLNTQESRWELAS 234
                 69******************************************9866 PP

  == domain 4  score: 20.4 bits;  conditional E-value: 1.6e-07
     Kelch_2   1 rrgghsssvpggkiyvvGGahtdnpnlsssdvhvldlekhvWeev 45 
                 +r+gh++ +  +k+y++GG    ++  + +dv+++ ++   W++v
  EPX70876.1 242 ARAGHVAISYSDKLYIIGGT---DGQTYYNDVWCFHPKQSAWSKV 283
                 699*****************...*******************998 PP

  == domain 5  score: 25.7 bits;  conditional E-value: 3.4e-09
     Kelch_2   1 rrgghsssvpggkiyvvGGahtdnpnlsssdvhvldlekhvWeev 45 
                 +r+ghs+s +++ +yv+GG+  + ++ + +d++ l  ++++W ++
  EPX70876.1 292 PRAGHSASIIDDVVYVFGGR--SSDGAFLNDLYALKISTKQWYRL 334
                 79******************..********************986 PP

>> Imm7  Immunity protein 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.2       4.6     1e+04      22      51 ..     680     708 ..     668     728 .. 0.62
   2 ?   13.3   0.2   3.4e-05     0.076      23      80 ..     903     958 ..     893     961 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 4.6
        Imm7  22 llesivkeieskideldysselvdLraknG 51 
                  ++++ +e+ +++d+l  ss+ v ++ +n 
  EPX70876.1 680 VMRETSTELSQQLDDLS-SSKKVFIKRMND 708
                 56677778888888888.666666666654 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 3.4e-05
        Imm7  23 lesivkeieskideldysselvdLraknGeyylhlgglsnhrteeaeevidlfkeiae 80 
                 l+  ++e  +ki++ld  +++ +Lr  nG+++++l++  ++r++ a+++++l  ++a+
  EPX70876.1 903 LRLEIREASEKINALD--YHTTSLREENGQMQVQLMNALEQRNNGAKQLVNLRMQLAN 958
                 555699999*******..67789***************************99888776 PP

>> MCD_N  Malonyl-CoA decarboxylase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.1       3.3   7.4e+03      27      47 ..     691     710 ..     662     733 .. 0.63
   2 ?    9.6   0.3   0.00044      0.98      27      68 ..     923     964 ..     905    1005 .. 0.81
   3 ?   -2.1   0.0       1.9   4.3e+03      68      82 ..    1069    1083 ..    1058    1084 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 3.3
                 HHHHHCSBHHHHHHHHHTTST CS
       MCD_N  27 eLrealeprrqeLlrrlnlap 47 
                 +L   l++++  +++r+n ++
  EPX70876.1 691 QLD-DLSSSKKVFIKRMNDLE 710
                 222.23344445556665554 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00044
                 HHHHHCSBHHHHHHHHHTTSTTHHHHHHHHHHHHHHHTTT-G CS
       MCD_N  27 eLrealeprrqeLlrrlnlapgGvkfLVdmRadllallkkek 68 
                 +Lre     +++L+  l + ++G k+LV++R +l + +++ +
  EPX70876.1 923 SLREENGQMQVQLMNALEQRNNGAKQLVNLRMQLANTTSELD 964
                 566666667789*********************998877766 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 1.9
                  GCHHHHHHHHHHHHH CS
       MCD_N   68 kelraldadlehlls 82  
                  +++++l++++ hl+ 
  EPX70876.1 1069 NAIHSLEEKFSHLFD 1083
                  578999999999995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1122 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1493  (0.0832729); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                        21  (0.00117129); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.97u 0.29s 00:00:01.26 Elapsed: 00:00:00.48
# Mc/sec: 7083.25
//
Query:       EPX70877.1  [L=596]
Description: cytoplasmic aspartate-tRNA ligase Drs1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.9e-78  263.7   0.1    3.4e-78  262.9   0.1    1.3  1  tRNA-synt_2      tRNA synthetases class II (D, K and N)
    1.3e-05   25.1   0.3    2.4e-05   24.2   0.3    1.4  1  tRNA_anti-codon  OB-fold nucleic acid binding domain
  ------ inclusion threshold ------
      0.046   13.2   0.2        4.5    6.7   0.0    2.4  2  tRNA-synt_2d     tRNA synthetases class II core domain (F)
        1.5    8.0   8.4        2.9    7.0   8.4    1.5  1  DUF1682          Protein of unknown function (DUF1682)
        2.2    8.9   5.6        6.3    7.4   5.6    1.7  1  DUF3824          Domain of unknwon function (DUF3824)


Domain annotation for each model (and alignments):
>> tRNA-synt_2  tRNA synthetases class II (D, K and N)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  262.9   0.1   9.4e-82   3.4e-78       3     313 ..     250     590 ..     249     591 .. 0.95

  Alignments for each domain:
  == domain 1  score: 262.9 bits;  conditional E-value: 9.4e-82
                  CHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHTT-EE----SEESS--SSSS--EEEEETTT.TEEE....-E-S-SHHHHHHHHHCTHSEEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2   3 elrlknryldlrtekvskvlrlrstvtkavrkyleengfieietPiLsksdteegarlFkvksrekekeff....aLtqspqlylellivagidrvfq 96 
                  ++rl+nr+ldlrt+  ++++ ++s + +a+r++l  n f ei+tP ++ + +e+ga+ Fk+       ++f    +L qspqly+++li+a  +rvf+
   EPX70877.1 250 DTRLDNRVLDLRTPTNQAIFDIQSGICDAFREHLLANSFNEIHTPKMTGASSEGGANVFKI-------SYFkgagYLSQSPQLYKQMLISADRERVFE 340
                  689**********************************************************.......77778889********************** PP

                  EEEEE--S--BTTB-S-CEEEEEEEEET-SCHH.HHHHHHHHHHHHHHHHHHCSCCCCCHTTTTTS.....EE-SSS-EEEEHHHHHHHHHTS..... CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxx..... RF
  tRNA-synt_2  97 iaraFRaEdsrtdrhlaEFtqieaemsfieeed.imqvleelikslvkevlessakdiefvirrns.....kdlkkpfkrltykeaieklnei..... 183
                  ++++FRaE+s+t rh++EFt +++em+f e+ + ++++le+l+ +++k+++e+  ++i  v +  s      ++ ++  r+++kea++ l+e      
   EPX70877.1 341 VGPVFRAEESNTYRHMTEFTGLDLEMAFYEHYHeVVEFLENLFLHIFKTLKEKYSRQIALVRNVYSsedfvLPVGSERVRFHFKEAVQLLREAgyrkq 438
                  *****************************98888****************99999999999988777666555555666************99***** PP

                  ....................-SS--HHHHHHHHH....HS--SEEEEEEEBGGGSTTCBBBSTTSTTBBSEEEEEETTEEEEEEEEB--SHHHHHHHH CS
                  ....................xxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2 184 ....................gkdldkaderalvk....keknepvfvtdfPaelkpFyarkeeddkkltesyDllingvElvgGslRiedpeeleekl 257
                                       +d ++++er+l +    k +++++ + ++P++++pFy+  + +d++ ++syD++++g E+++G++Ri+dpe+l e++
   EPX70877.1 439 ltpgqeppkdeefrycedpeFDDFSTPEERVLGTivreKYNTDFYVIDKYPSSVRPFYTMPDPEDPRYSNSYDFFMKGQEIMSGAQRIHDPELLTERM 536
                  *******************9999********9877777999999***************999999********************************* PP

                  HHCCHHSSSGGGGHHHHHHHHCT--SEEEEEEEHHHHHHHHCT-SSGGGCSSS-XX CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2 258 kskgldeeaeekfswylealeyGapphgGlglGldRlvmlllgsesIrdviaFPkl 313
                  ++ g+       ++ y++ + +G+pph+G g+Gl+R++m++l++++Ir ++aFP+ 
   EPX70877.1 537 RALGIV--PDVGLQSYIDSFALGCPPHAGGGIGLERVLMFFLNLPNIRLASAFPRD 590
                  ******..8899******************************************95 PP

>> tRNA_anti-codon  OB-fold nucleic acid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.3   6.6e-09   2.4e-05       1      75 [.     122     208 ..     122     209 .. 0.91

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 6.6e-09
                      EEEEEEEEEEEEEEETTEEEEEEEETTEEEEEEEET......HHHHHHHTTS-TTSEEEEEEEEEECTTS.......SEEEEEEEEEE CS
  tRNA_anti-codon   1 VtvaGrvtsisdrsggkvifidlrDgtgriqvvlfr......eeatklaenlkeGdvvrvtGrvkrrpgg.......elelkveeiel 75 
                      V +++rv + +  +g+k++f+ lr    +iq+ +        + + k+  ++  +++v v+G+v+++p+        + e++v+++ +
       EPX70877.1 122 VLIRARVFTSR-LQGNKMCFFSLRQQYNTIQALVVVdkdtisKPMVKWCGSIGLESIVAVEGTVQKSPEViksatvqDAEIHVSNVYV 208
                      67999999998.99*****************9988888*****************************998888888888999888765 PP

>> tRNA-synt_2d  tRNA synthetases class II core domain (F)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.1    0.0084        30     100     129 ..     334     364 ..     320     397 .. 0.71
   2 ?    6.7   0.0    0.0012       4.5     215     232 ..     565     582 ..     554     587 .. 0.91

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.0084
                   SSEEEEEEEEEEBSST.-SSSB-SEEEEEEE CS
  tRNA-synt_2d 100 ppikiisigrvfRrda.vDathlaeFhqveg 129
                      +++ +g vfR ++   ++h+ eF+ ++ 
    EPX70877.1 334 DRERVFEVGPVFRAEEsNTYRHMTEFTGLDL 364
                   55699********999678899999987664 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0012
                   EEEHHHHHHHHHT-SSGH CS
  tRNA-synt_2d 215 GlGveRlamlkygieDiR 232
                   G+G+eR+ m+ +++++iR
    EPX70877.1 565 GIGLERVLMFFLNLPNIR 582
                   9****************9 PP

>> DUF1682  Protein of unknown function (DUF1682)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   8.4   0.00082       2.9     254     288 ..      47      81 ..      10      90 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.00082
     DUF1682 254 lrpevlkklkktReevekklkkeaeeekaEeaqek 288
                 l++++lkkl+k Re+++k++++ea+e++++ ++e+
  EPX70877.1  47 LSKKALKKLEKEREKEQKRIEREAREAEEKSKREA 81 
                 899******************99997775433333 PP

>> DUF3824  Domain of unknwon function (DUF3824)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   5.6    0.0018       6.3      22      68 ..      51      98 ..      48     109 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0018
     DUF3824 22 Aaheyakrrerkkaerererrreede.ardsyeeeyepepyspsPeas 68
                A ++++k re+ ++  ere r+ e++ +r+ +e +y++  y+  P + 
  EPX70877.1 51 ALKKLEKEREKEQKRIEREAREAEEKsKREASEVDYSEGRYGVLPLNR 98
                66788888888888888888888888689************9999743 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (596 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1534  (0.0855597); expected 358.6 (0.02)
Passed bias filter:                      759  (0.0423336); expected 358.6 (0.02)
Passed Vit filter:                        76  (0.00423894); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.68u 0.31s 00:00:00.99 Elapsed: 00:00:00.45
# Mc/sec: 3972.50
//
Query:       EPX70878.1  [L=457]
Description: dihydrofolate reductase Dfr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.9e-62  210.1   0.0    4.3e-62  209.5   0.0    1.3  1  FSH1           Serine hydrolase (FSH1)
    1.4e-23   83.4   0.0    1.7e-22   79.8   0.0    2.1  1  DHFR_1         Dihydrofolate reductase
  ------ inclusion threshold ------
      0.046   13.5   0.0       0.13   12.0   0.0    1.8  1  Abhydrolase_2  Phospholipase/Carboxylesterase


Domain annotation for each model (and alignments):
>> FSH1  Serine hydrolase (FSH1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  209.5   0.0   7.3e-66   4.3e-62       1     210 [.       1     212 [.       1     214 [. 0.95

  Alignments for each domain:
  == domain 1  score: 209.5 bits;  conditional E-value: 7.3e-66
        FSH1   1 mskkkkiLcLhGytqsgeiFraktsalrkllkklnvelvyldaplelaekadlpkseseeee..kseeeeesraWfrkkdekneyegleesldavkdyi 97 
                 m +++k+LcLhG++qsg + ++k++ ++k l+k  +el+++++p+e + ++d +++ ++++      ++  +++Wf+ +d kn+ye++++sl+++++y+
  EPX70878.1   1 MPQPMKVLCLHGWVQSGPTMSKKMGTVQKYLSK-FAELHFPTGPVEYKAEVDPNDEAEQKRLasMGADQGGKYGWFEVEDFKNTYESWDKSLQVINEYM 98 
                 66899***************************9.*************99999887755554488899999***************************** PP

        FSH1  98 kengpfdGiiGFSqGaalaallaslleellkea...shpslkfailvsGfkleepkyeeyyeedkiqtptLhvlGelDtvvdeerseaLaeafknsskv 193
                 ke+gpfdG+iGFSqGa ++a+la+ll+++++ +   +hp+lkfa+++ Gf++e+p+++++y e+k+++p Lh+ G++Dt+v+ +r+++L+e ++n +++
  EPX70878.1  99 KEKGPFDGLIGFSQGAGIGAMLAHLLQPGQPPNpyvQHPPLKFAVFIGGFRSEKPEFNHFY-EPKLTIPNLHITGTADTLVPLARAKELMERCEN-PNI 195
                 ******************************9999***************************.*********************************.*** PP

        FSH1 194 lkHpggHfvPnkkeyvd 210
                 l Hpg H vP+++ y++
  EPX70878.1 196 LLHPGMHVVPQQAVYKT 212
                 ************99875 PP

>> DHFR_1  Dihydrofolate reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.8   0.0   2.8e-26   1.7e-22       2     144 ..     234     413 ..     233     418 .. 0.76

  Alignments for each domain:
  == domain 1  score: 79.8 bits;  conditional E-value: 2.8e-26
                 EEEEEEEETT-.EEEBTTB-SS--HHHHHHHHHHHTT..............CEEEEEHHHHHCC-...S--TTCEEEEE-S-TT---.........TTE CS
      DHFR_1   2 islivAvaeng.vIGkdnklpwhlpeDlkrFkklTtg..............kpvimGrkTfeslg..krpLpnrkniVltrnedlkv.........egv 74 
                 ++livAv++    IGk+n++pwh++e++ +F ++T                + v+mGr  ++s++  +rpL++r n+V+tr+e++++         e+ 
  EPX70878.1 234 LTLIVAVSSPSlGIGKKNNMPWHIKEEMGYFANVTSStngielaegkskvmNVVLMGRACYDSIPkkNRPLKDRINVVITRTENYNFgltkkdkipEHL 332
                 7899999876527*******************99965222333333333334799*********97788***************777665433332234 PP

                 EEESSHHHHC.....CCCTTS...SEEEEEE-HHHHHHCG..GG-SEEEEEEESS----SEE--..---CCCEEEEEEEEE CS
      DHFR_1  75 evvssleeal.....alakee..keevfviGGaeiYkqal..pladklylTeidaefegdtffp..eideeewelvereeh 144
                   ++s+++al     ++ +++    +vfviGG+ +Y   l  +l++++  T+i +e+++d+ffp    d ++we++++ e 
  EPX70878.1 333 YAADSIDAALdtlaeKYDNTDiqVGKVFVIGGSFLYGSSLyhRLTKNILFTRIYHEYQCDSFFPfePKDAAAWEKKSHAEL 413
                 48899999996665433333355579**********8766337899******************86677899999988765 PP

>> Abhydrolase_2  Phospholipase/Carboxylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   2.2e-05      0.13     109     183 ..     107     191 ..      64     211 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.2e-05
                    EEEETHHHHHHHHHH.HT-SS..........--SEEEEES---TTGGGTTTTS-GGGGG-EEEEEEETT-SSS-HHHHHHHHHHHH CS
  Abhydrolase_2 109 igGFSqGaalalyla.ltlpk..........klggivafsgalplsqklessatavtkklpilqiHgeeDpvvplalgkaakevlk 183
                    ++GFSqGa ++  la l +p           +l+ +v ++g+ + +++++ ++ +    +p l+i g+ D +vpla +k++ e  +
     EPX70878.1 107 LIGFSQGAGIGAMLAhLLQPGqppnpyvqhpPLKFAVFIGGFRSEKPEFN-HFYEPKLTIPNLHITGTADTLVPLARAKELMERCE 191
                    79*****98865544133333556666777799****************9.68777788****************99998877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (457 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       435  (0.0242624); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3437.49
//
Query:       EPX70879.1  [L=296]
Description: uricase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-65  219.7   5.4    1.4e-34  119.2   2.5    2.0  2  Uricase         Uricase
  ------ inclusion threshold ------
      0.037   13.2   0.1       0.21   10.7   0.0    1.9  2  Glyco_hydro_57  Glycosyl hydrolase family 57
      0.066   13.8   0.5        4.5    7.9   0.1    2.2  2  FolB            Dihydroneopterin aldolase


Domain annotation for each model (and alignments):
>> Uricase  Uricase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.2   2.5   2.3e-38   1.4e-34       2     130 ..      11     136 ..      10     137 .. 0.95
   2 !  101.6   0.0   6.2e-33   3.7e-29       3     131 .]     148     290 ..     146     290 .. 0.96

  Alignments for each domain:
  == domain 1  score: 119.2 bits;  conditional E-value: 2.3e-38
                 EEEEEEEEEEEEEETTCBEBECEEEECCEEEEEESSEEECCHHH-STTT---CCHHHHHHHHHHHHH--SSHH.HHHHHHHHHHHC-TTEEEEEEEEEE CS
     Uricase   2 kyGkddvrvlkvrkstgsafhgfvedevttllegkdrilstyfagdnsdvvasdSvkntvYkmakkhgvespe.Falllakhflekyphveevsvslpn 99 
                 +yGk+ v+++k    +++++h+++e++++ +l g + ++++y+++dns vv++d++knt+Y++ak+++v+  e Fa++lakhf+++y+h++ ++v+++ 
  EPX70879.1  11 SYGKTMVKFMKKDVCPETKVHTIYEMDIQSMLSG-E-LDESYTKADNSVVVPTDTQKNTIYVFAKNNDVSVLEvFAAKLAKHFVDRYQHIHGATVDITL 107
                 7**********744567789**************.9.************************************************************** PP

                 EEEEEEEECCSSEEEEEECEEEECCCCEEEE CS
     Uricase 100 khwervdlwgtgkphahafvftpsekptgli 130
                 ++w r+++  +gkph+h+fv++pse++ +++
  EPX70879.1 108 TPWARMNV--HGKPHNHSFVRDPSETRKTHV 136
                 ********..469**************9887 PP

  == domain 2  score: 101.6 bits;  conditional E-value: 6.2e-33
                 EEEEEEEEEEEEETTCBEBECEEEECCEEEEEESSEEECC...................................HHH-STTT---CCHHHHHHHHHHH CS
     Uricase   3 yGkddvrvlkvrkstgsafhgfvedevttllegkdrilst...................................yfagdnsdvvasdSvkntvYkmak 66 
                 ++++dv+vlk   stgsaf++f+++e+ttl+e++dri+st                                   +fa d+     s+Sv++t+Ykma 
  EPX70879.1 148 SSLKDVLVLK---STGSAFNKFHKCEYTTLPEVDDRIFSTnidcnytfnqfstfdelasydfnhayksvkeitldTFALDD-----SASVQATMYKMAD 238
                 899*******...********************************************************************.....************* PP

                 HH--SSHHHHHHHHHHHHHC-TTEEEEEEEEEEEEEEEEEE.CC..SSEEEEEECEEEECCCCEEEEE CS
     Uricase  67 khgvespeFalllakhflekyphveevsvslpnkhwervdl.wg..tgkphahafvftpsekptglie 131
                 +               +++k+p v ev + lpnkh+++++l  +  + +   +  +++p++ p+g+i+
  EPX70879.1 239 Q---------------IINKFPNVAEVFYGLPNKHYFEINLtPFgiD-NLGTNCSLYQPQAYPSGYIT 290
                 *...............*************************888853.589**************995 PP

>> Glyco_hydro_57  Glycosyl hydrolase family 57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   3.6e-05      0.21     187     272 ..      30     105 ..      21     127 .. 0.84
   2 ?    0.5   0.0     0.047   2.8e+02      48     107 ..     143     201 ..     130     268 .. 0.51

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 3.6e-05
                     HHHHHHTT--EEEE-C------------TTS-EE-TTS.-EEEE--CHH-TTTSGGG-............TTSB..........-T CS
  Glyco_hydro_57 187 leilaelGfeylftdelaeiledkskespyrpyllknggiavffRdreLsddigFryseqypleavddfinwlkkvkkaksevvti 272
                     +++++e+ ++ ++++el+e   ++  +s ++p  ++++ i+vf+ + + s +  F        + ++ f+++++++    +  v i
      EPX70879.1  30 VHTIYEMDIQSMLSGELDESYTKA-DNSVVVPTDTQKNTIYVFAKNNDVSVLEVFAA------KLAKHFVDRYQHI---HGATVDI 105
                     6899************99999998.78999999999999***********9999963......3688888888888...4455555 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.047
                     ---EEEEE-HHHHHHHT-H.HHHHH............................HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH CS
  Glyco_hydro_57  48 tfeLsgsLiaqLeeylnge.kksyl............................pateellelieeglerctelkldlavlfnlaisgpl 107
                      f+++ sL ++L+  ++g   + +                                                             ++ l
      EPX70879.1 143 GFDVVSSLKDVLVLKSTGSaFNKFHkceyttlpevddrifstnidcnytfnqfS------------------------------TFDEL 201
                     588899999999999999996666635554555444444333333333332220..............................22222 PP

>> FolB  Dihydroneopterin aldolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.1   0.00076       4.5      40      94 ..      51     106 ..      27     116 .. 0.80
   2 ?    4.1   0.0     0.011        68      25      89 ..     182     250 ..     177     264 .. 0.74

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.00076
                 HHTTGGGSS-HHHHHHHHHHHHHSSEES-HHHHHHHHHHHHHCHST.ESEEEEEEE CS
        FolB  40 esddledtvdYaelakavkelvesssfkllEalaeriaealleefp.vekvevrve 94 
                 ++ d + +v  ++  +++  +++++ +  lE +a+++a++ +++++ ++ ++v ++
  EPX70879.1  51 TKADNSVVVPTDTQKNTIYVFAKNNDVSVLEVFAAKLAKHFVDRYQhIHGATVDIT 106
                 4445566777888889999999*99*******************999999888775 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.011
                 EEEEEEEEE-CHHHHHHTTGGGSS-HHHHHHHHHHH....HHSSEES-HHHHHHHHHHHHHCHST.ESEE CS
        FolB  25 vvvdleleldlskaaesddledtvdYaelakavkel....vesssfkllEalaeriaealleefp.vekv 89 
                 +  ++++++ +++ ++ d+l+ + d+ +++k vke+    ++ +   ++ a + + a++++++fp v +v
  EPX70879.1 182 FSTNIDCNYTFNQFSTFDELA-SYDFNHAYKSVKEItldtFALDDSASVQATMYKMADQIINKFPnVAEV 250
                 678889999899999888864.445555555555552111565588889999999999999999987766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (296 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       611  (0.0340789); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 2014.28
//
Query:       EPX70880.1  [L=274]
Description: RNA polymerase II transcription elongation factor SpEAF [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.5e-19   68.0   0.0    1.4e-18   67.1   0.0    1.5  1  EAF       RNA polymerase II transcription elongation factor


Domain annotation for each model (and alignments):
>> EAF  RNA polymerase II transcription elongation factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.1   0.0   7.9e-23   1.4e-18       1      99 [.       9     106 ..       9     107 .. 0.86

  Alignments for each domain:
  == domain 1  score: 67.1 bits;  conditional E-value: 7.9e-23
         EAF   1 YpiklgssllnalkssksefvairYnfkPasvdqskegtlkqsssenkevsvelsf..sdt.....FeGseqpakekdcvLvfdeetkeftLerldstv 92 
                 Ypi  gss+ln    +++ +v+++YnfkP+svd+s++g +++   ++++ +++l++  + +     FeGs q+a++ dcvLv+++++k+ft+e++d+ +
  EPX70880.1   9 YPILPGSSFLN----KSNGLVSVKYNFKPESVDRSRKGGMEK---SQDTYRLTLPStlE-HgrphvFEGSGQQARNVDCVLVYNPKNKTFTIEQMDEII 99 
                 9999*****87....689***********************9...34555666666322.145779********************************* PP

         EAF  93 rlnltrs 99 
                 r+   r+
  EPX70880.1 100 RVHALRN 106
                 *988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (274 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       274  (0.0152825); expected 358.6 (0.02)
Passed bias filter:                      221  (0.0123264); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 2078.50
//
Query:       EPX70881.1  [L=266]
Description: hypothetical protein SOCG_04077 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       751  (0.0418874); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.27s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2042.04
//
Query:       EPX70882.1  [L=585]
Description: IMPcyclohydrolase/phosphoribosylaminoimidazolecarboxamideformyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-88  297.4   0.0    1.7e-88  296.9   0.0    1.2  1  AICARFT_IMPCHas  AICARFT/IMPCHase bienzyme
    2.5e-24   85.3   0.0    4.7e-24   84.4   0.0    1.5  1  MGS              MGS-like domain


Domain annotation for each model (and alignments):
>> AICARFT_IMPCHas  AICARFT/IMPCHase bienzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  296.9   0.0   1.9e-92   1.7e-88       1     296 []     131     453 ..     131     453 .. 0.91

  Alignments for each domain:
  == domain 1  score: 296.9 bits;  conditional E-value: 1.9e-92
                      HHHTTTT-EEE-SGGGHHHHHHHHHCT.B-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSE...EEEEEEEEESSSSSTTS-E.EEEE-TTST CS
  AICARFT_IMPCHas   1 AAKNhksVtvvvdpadYeevleelkkgevsletrkklaakaFahtaaYDaaiaeylskqlpetlklslekkqkLrYGeNphQka.alyeeeeee 93 
                      AAKNh++V +++dp+dY +++e+l +++++++ r+++a+kaFa ta+YD+ai++y++kq++    + +++ ++LrYG+NphQ++ ++y    e+
       EPX70882.1 131 AAKNHARVSILTDPKDYPTFAEKLLTNSLTQDDRNQYALKAFASTASYDSAITDYFRKQYS----VGVNQ-MTLRYGANPHQSPaQAYM---ET 216
                      9*******************************************************99885....45555.9***********967885...56 PP

                      THHH-EEEESS---HHHHHHHHHHHHHHCTS....E..EEEEEETTEEEEEEE...................ESSHHHHHHHHHCCSHHHHTTE CS
  AICARFT_IMPCHas  94 glakaeqlqGkelsynNllDadaalelvkef....a..avaivKHanpcGvAv...................getlaeAyekAlaaDpvSaFGg 162
                      g   ++ l G +++y+NllD  +++ lvke+       a+a++KH++p+G+Av                    + la Ay++A+ aD++S+FG+
       EPX70882.1 217 GPLPFKVLGG-SPGYINLLDGLNSWPLVKELheniGlpAAASFKHVSPAGAAVgvplseleksvyfvgdideLTPLACAYARARGADRMSSFGD 309
                      7788999999.******************987655156888************9999999999999999887334899**************** PP

                      EEEECCEE-HHHHHHHTTS-ECEEEECEE-CCHHHCCTTS..SS-EEEE-SS-......EEEEETTEEEEEE--G..TTCCCS.EEECS.C--- CS
  AICARFT_IMPCHas 163 iialnrevdaetaeeikkefleviiApsfeeealeilkkk..knlrvlelkee......elrsvsgglLvqerdeakieeeel.kvvtk.kkpt 246
                      +ial+++vd+ ta++i++e+++++iAp+fe+ealeilkkk  +++++l+++++      e+r+v g  L+q+r++aki+ + + kvv+k k+  
       EPX70882.1 310 FIALSSKVDVCTARIISREVSDGVIAPDFEPEALEILKKKkgGKYCILQMDPNyvpaelETRQVYGINLQQHRNHAKIDYTLFdKVVSKnKELP 403
                      *************************************776477*********5567778****97777***********987789999944678 PP

                      HHHHHHHHHHHHHCCCS-SS-EEEEETTEEEEEE-SSSSHHHHHHHHHHH CS
  AICARFT_IMPCHas 247 eeeledllfawkvvkhvkSNaivlakdgqtvgiGaGqmsRvdsarlAvek 296
                      +++l dl +a++++k+++SN++++ak+g++vg+GaGq+sR+++ rlA++k
       EPX70882.1 404 KSALVDLVVATTALKFTQSNSVCYAKNGMVVGLGAGQQSRIHCNRLAGDK 453
                      999********************************************987 PP

>> MGS  MGS-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.4   0.0   5.2e-28   4.7e-24       1      95 []      12     126 ..      12     126 .. 0.98

  Alignments for each domain:
  == domain 1  score: 84.4 bits;  conditional E-value: 5.2e-28
                 THHHHHHHHHHTTCEEEEEHHHHHHHHHTT--EEECCCCHSTGSGGTHCH.................HHHHHHHTTSCC...EEEEE--THHHHHHCHH CS
         MGS   1 glvelakklkelgfellATgGTakllkeagipvtevvektgegerlggrv.................eildaikngeid...lvintlypfkatvakdg 79 
                 gl++lak+l+++g++ll +gGTak+++eag++ ++v+ +t+ +e+lggrv                 ++++++ +++i+   +v+++lypf++t+ak++
  EPX70882.1  12 GLLDLAKALVSKGIKLLGSGGTAKMIREAGMEIQDVSSITNAPEILGGRVktlhpavhggilardipSDEKDLVEQQIEkidVVVCNLYPFRETIAKPN 110
                 689************************************************************************9999999***************** PP

                 HHHHHHHHHTTSHEES CS
         MGS  80 ykirraaenidIplpt 95 
                 ++i +a+e+idI+++t
  EPX70882.1 111 VTIPEAVEEIDIGGVT 126
                 **************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (585 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       406  (0.0226449); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 4546.75
//
Query:       EPX70883.1  [L=273]
Description: tRNA (guanine-N7-)-methyltransferase catalytic subunit Trm8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      2e-52  177.2   0.0    2.7e-52  176.7   0.0    1.2  1  Methyltransf_4   Putative methyltransferase
    0.00019   22.1   0.0    0.00039   21.1   0.0    1.6  1  Methyltransf_25  Methyltransferase domain
    0.00025   20.6   0.0     0.0016   18.0   0.0    2.0  1  MTS              Methyltransferase small domain
     0.0022   18.0   0.0     0.0042   17.1   0.0    1.5  1  Methyltransf_32  Methyltransferase domain
     0.0045   17.7   0.0     0.0093   16.7   0.0    1.5  1  Methyltransf_12  Methyltransferase domain
  ------ inclusion threshold ------
      0.017   14.9   0.0      0.033   14.0   0.0    1.4  1  Methyltransf_31  Methyltransferase domain
       0.09   13.4   0.0       0.21   12.3   0.0    1.7  1  Methyltransf_11  Methyltransferase domain
       0.17   10.9   0.0       0.22   10.5   0.0    1.2  1  RrnaAD           Ribosomal RNA adenine dimethylase


Domain annotation for each model (and alignments):
>> Methyltransf_4  Putative methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  176.7   0.0   1.2e-55   2.7e-52       2     172 ..      80     262 ..      79     263 .. 0.98

  Alignments for each domain:
  == domain 1  score: 176.7 bits;  conditional E-value: 1.2e-55
                     -EEEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHHHHHC............TTSSEEEEES-CCCHHHHCS-TTSEEEEEEES---- CS
  Methyltransf_4   2 apvvleiGcGkGeflvalAkknPdknflGiEirvkvvakvlkkieal............elkNlrilrgdalkvllelledgslekifilFPDPw 84 
                     ++ +++iGcG+G+++val +++Pd ++lG+Eir +v++++ +ki+a             ++kN+ +lr + +k+l++++e+g+l+k+f++FPDP+
      EPX70883.1  80 KVEIVDIGCGYGGLTVALGPHFPDSLVLGMEIRMQVTDYLKEKIQAIryraeheepvtgGYKNISVLRMNCQKFLPNFFEKGQLTKMFFCFPDPH 174
                     6789*****************************************9999********************************************** PP

                     -SGGGGGGSTTSHHHHHHHHHHEEEEEEEEEEESHHHHHHHHHHHHHCSTTEEESSCCCSCCTCHCHHCCCSSTTCCCCCCTTSS-EE CS
  Methyltransf_4  85 fKkrhhKrRllqpellkelarvLkkgGvlelaTDveeyaeemlkvleeeplferlskeeeleeeplsvlriatkyeqkvqskgkeiye 172
                     fK+r+hK R+++ +l +e+a+ +++ G l+++TDvee++ +m++ l+++plf rls++ee ++ ++  + + t++++kv ++g++++ 
      EPX70883.1 175 FKARKHKNRIVTGTLASEYAYFIQPHGRLYTITDVEELHLWMAETLDKHPLFRRLSRDEEAKDICVALMTNETEEGKKVARNGGKKFT 262
                     ************************************************************************************9986 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0   1.7e-07   0.00039       1      64 [.      83     162 ..      83     190 .. 0.67

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 1.7e-07
                      EEEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHH.......TTT......TEEEEESBCCG.BS..SSTTT CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlgkakvtgvDiseemleaareraee.......egl......nvefvqgdaed.lp..fedgs 64 
                      ++d+GcG G lt al  +++++ v+g++i  +  ++ +e++++       e++      n++++++++++ lp  fe+g+
       EPX70883.1  83 IVDIGCGYGGLTVALGPHFPDSLVLGMEIRMQVTDYLKEKIQAiryraehEEPvtggykNISVLRMNCQKfLPnfFEKGQ 162
                      89****************97677777777666666666666543332222544666677777777777764445445555 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   7.2e-07    0.0016      31      81 ..      79     129 ..      70     227 .. 0.90

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 7.2e-07
                 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC CS
         MTS  31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle 81 
                 ++ +++D+GcG+G l++al  + p+  v  +++ ++  +  ke ++a + +
  EPX70883.1  79 KKVEIVDIGCGYGGLTVALGPHFPDSLVLGMEIRMQVTDYLKEKIQAIRYR 129
                 55679********************999999*9999999999998886655 PP

>> Methyltransf_32  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   1.9e-06    0.0042      22      81 ..      76     131 ..      68     189 .. 0.81

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 1.9e-06
  Methyltransf_32  22 kesgaltvvDvGaGkgYLsfvlalkeke.yklkvvgidakeelvekaekraeklgkkfnkr 81 
                      ++ +++++vD+G+G g L+ +l     +     v+g++++ ++++  ++  ++++  + ++
       EPX70883.1  76 NSGKKVEIVDIGCGYGGLTVALGP---HfPDSLVLGMEIRMQVTDYLKEKIQAIR--YRAE 131
                      567899*****************9...446899***********99999999998..5333 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   4.2e-06    0.0093       1      46 [.      84     129 ..      84     138 .. 0.87

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 4.2e-06
  Methyltransf_12   1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrenn 46 
                      ++iGcG G l+ al +++pd+ ++g++i  ++ +  kek+++++ +
       EPX70883.1  84 VDIGCGYGGLTVALGPHFPDSLVLGMEIRMQVTDYLKEKIQAIRYR 129
                      69*******************************7778887777654 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   1.5e-05     0.033       2      68 ..      78     156 ..      77     173 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1.5e-05
  Methyltransf_31   2 dkglrvlDlGCGtGeltfelae......elgpkaevvGiDiseeaielArenaqkl.....gldnveFeqgdiee.lek 68 
                       k+++++D+GCG G lt +l         lg+++++   D+ +e i+  r +a++      g++n+++ + + ++ l++
       EPX70883.1  78 GKKVEIVDIGCGYGGLTVALGPhfpdslVLGMEIRMQVTDYLKEKIQAIRYRAEHEepvtgGYKNISVLRMNCQKfLPN 156
                      57899***************98888888778888888889999999999999998644444678888888888887774 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   9.2e-05      0.21       1      43 [.      84     128 ..      84     173 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 9.2e-05
                      EEET-TTSHHHHHHHHTT..SEEEEEES-HHHHHHHHHHCCHHT- CS
  Methyltransf_11   1 LdvGcGtGrlaealakrg..arvvgvDlskemlklakekaseegl 43 
                      +d+GcG G l+ al  ++  + v+g+++  +++++ kek++  + 
       EPX70883.1  84 VDIGCGYGGLTVALGPHFpdSLVLGMEIRMQVTDYLKEKIQAIRY 128
                      59*************999999************999999987553 PP

>> RrnaAD  Ribosomal RNA adenine dimethylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   9.9e-05      0.22      30      73 ..      79     124 ..      67     188 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 9.9e-05
                 TTSEEEEES-TTTCCHHHHHCC-.SEEEE.E-S-HHHHHHHHCHTT CS
      RrnaAD  30 ekltvleigpGkGilTeeLakra.kqvvv.lElderLakllqkkls 73 
                 +k ++++ig G G lT+ L   + +++v+ +E++ +    l++k++
  EPX70883.1  79 KKVEIVDIGCGYGGLTVALGPHFpDSLVLgMEIRMQVTDYLKEKIQ 124
                 7889*******************98888769******999999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (273 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       431  (0.0240393); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.42u 0.28s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1990.41
//
Query:       EPX70884.1  [L=293]
Description: urease accessory protein UREG [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-33  116.2   0.0    1.5e-33  115.9   0.0    1.1  1  cobW      CobW/HypB/UreG, nucleotide-binding domain
     0.0022   17.0   1.6      0.028   13.4   1.6    2.0  1  MeaB      Methylmalonyl Co-A mutase-associated GTPase MeaB
     0.0033   17.8   0.0     0.0041   17.5   0.0    1.2  1  AAA_16    AAA ATPase domain
  ------ inclusion threshold ------
      0.014   15.4   0.0      0.039   14.0   0.0    1.9  1  MMR_HSR1  50S ribosome-binding GTPase
      0.021   14.3   0.0       0.03   13.8   0.0    1.2  1  Pox_A32   Poxvirus A32 protein
      0.023   15.3   0.0       0.04   14.5   0.0    1.5  1  AAA_18    AAA domain
       0.03   13.9   0.0      0.058   13.0   0.0    1.4  1  AAA_25    AAA domain
      0.065   13.1   0.0      0.099   12.6   0.0    1.4  1  NACHT     NACHT domain
       0.12   12.4   0.0       0.23   11.4   0.0    1.5  1  AAA_5     AAA domain (dynein-related subfamily)
        1.3    8.9   0.0        1.3    8.9   0.0    2.7  3  MobB      Molybdopterin guanine dinucleotide synthesis protei


Domain annotation for each model (and alignments):
>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.9   0.0   8.3e-37   1.5e-33       3     174 ..      97     264 ..      95     267 .. 0.92

  Alignments for each domain:
  == domain 1  score: 115.9 bits;  conditional E-value: 8.3e-37
                 EEEEESTTCCHHHHHHHHH.CT--SS-EEEEESS-SSCHCCCCCCHCCCT.....EEEETTTTECCH.CTT-HHHHHHHHHHHH..TT-SEEEEEECT. CS
        cobW   3 tvltGflGsGKTtLlnhll.enraglklavivNefgevsiDaellretgve....ivelenGciCct.lredllkelealeere..erldviliEttG. 92 
                 ++++G++GsGKT+Ll +l+ + ++++++ v++N++  + +D+e+l ++++     i  +e+G+++++ +red++++l alee++   + d++++E++G 
  EPX70884.1  97 IGVGGPVGSGKTALLLQLCrHLASKYSIGVVTNDIF-TREDQEFLIRNQALpqerIRAIETGGCPHAaIREDVSANLVALEELHaeFQTDLLFVESGGd 194
                 789****************888999***********.******997775555667***************************9977679*********7 PP

                 TTTHHHHHTTSHHHHHCCCECEEEEEEETTTH.CCHCCHHHHHHHHHHTSSEEEEE-HHHHCHC...HHHHHHHHHHHHTTS- CS
        cobW  93 laePapvafteeelksdltldavvavvDaknleaeeekieekaedqlaaadllvlnKtDlldee.allekleerlrqlnpeak 174
                 +++++ +         +  +d++++v+D+    + ++ki++k++ +++ +dllv+nKtDl+  + a+l+++++++++++++ +
  EPX70884.1 195 NLAANYS---------RELADFIIYVIDV----SGGDKIPRKGGPGITESDLLVINKTDLAALVgADLKVMDRDAKKVREDGP 264
                 7777777.........99***********....99*******************************************98765 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   1.6   1.6e-05     0.028      28     225 ..      93     283 ..      87     289 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1.6e-05
                 -SEEEEEEE-TTSSHHHHHHHHHHHHHCTT--EEEEEE------------------HCCCTSTTEEEEEE-----.....HHHHHHHHHHHHHHHHHTT CS
        MeaB  28 raqvvGltGvPGaGkstlvealglelrrrGkrvavlavDPsspftGGsilGDklRleelavdegvfiRslpsrGa.....lGGlaaktrevvllleaaG 121
                 r+  +G+ G  G+Gk  l+ +l  +l+++ + ++v+  D            D+  l + ++ ++  iR++ ++G         ++a+  ++ +l   + 
  EPX70884.1  93 RSFTIGVGGPVGSGKTALLLQLCRHLASK-YSIGVVTNDIFTRE-------DQEFLIRNQALPQERIRAIETGGCphaaiREDVSANLVALEELHAEFQ 183
                 67778888888888888888888888765.66888877765443.......555555555666666777776665111113445555555555666678 PP

                 -SEEEEEEESSTTHHHHHHTT-SEEEEEEESSTTTTTTT-.-CCCHHH-SEEEEE---HHHHHHHHHHHHHHHHHCSTTBTTB--EEEEEBCCCTBSHH CS
        MeaB 122 fDvvlietvGvGqsevdvaevvdtfvvlllpeaGDelqgi.kkGileiaDiivvnkaDkkeaekaarelraaleleeekekeWrpkvlktsavegeGid 219
                  D + +e  G   +     e++d ++ ++  ++GD++      Gi e +D++v+nk+D+++   + ++l+++ +  ++  +e  p v     ++++G+d
  EPX70884.1 184 TDLLFVESGGDNLAANYSRELADFIIYVIDVSGGDKIPRKgGPGITE-SDLLVINKTDLAA--LVGADLKVMDRDAKK-VREDGPTVFAQ-VKNNKGMD 277
                 8999999999999999999******************7651467877.8*********854..556666665544433.33445555544.45677888 PP

                 HHHHHH CS
        MeaB 220 elvdai 225
                 e+v+ i
  EPX70884.1 278 EIVELI 283
                 888766 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   2.3e-06    0.0041      27      89 ..      97     170 ..      81     259 .. 0.71

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 2.3e-06
      AAA_16  27 vllsGesGvGKsslvrellralekdg.gif....lrgkcdqlesaipysalaqalareellrqllde............a 89 
                 + + G+ G+GK++l+ +l r+l  ++ + +    + ++ dq      +++  qal + e +r++++             a
  EPX70884.1  97 IGVGGPVGSGKTALLLQLCRHLASKYsIGVvtndIFTREDQE-----FLIRNQALPQ-ERIRAIETGgcphaairedvsA 170
                 5589***************9***9954444224544444444.....7777788856.8889988885544433332222 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   2.2e-05     0.039       2      87 ..      97     219 ..      96     272 .. 0.64

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 2.2e-05
                 EEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEE........ETTEEEEEEECGGC...............SSHHHHHHH............ CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvk........lkgkeielvDtpGl...............iegaseekg............ 65 
                 +++ G   +GK+ L+ +l++  a   ++  +T di +++ +        l +++i+ + t G                +       +            
  EPX70884.1  97 IGVGGPVGSGKTALLLQLCRHLASKYSIGVVTNDIFTREDQeflirnqaLPQERIRAIETGGCphaairedvsanlvaL-------Eelhaefqtdllf 188
                 789999**************86666666666666644432223333555445789*******74444444444444431.......0333333334444 PP

                 .......HHHHHHHHHC.TSEEEEEEETT...T CS
    MMR_HSR1  66 .......lgkaflalee.adlillvvdas...e 87 
                        l+ ++ +  e ad i++v+d+s   +
  EPX70884.1 189 vesggdnLAANYSR--ElADFIIYVIDVSggdK 219
                 44333335555554..44799999999875440 PP

>> Pox_A32  Poxvirus A32 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   1.7e-05      0.03       6      42 ..      87     123 ..      83     143 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1.7e-05
     Pox_A32   6 resLlkkpFrlalvGgsGsGktvyLlsLlrtlvkkyk 42 
                  ++  ++ F + + G  GsGkt+ Ll+L r l +ky 
  EPX70884.1  87 NRDFARRSFTIGVGGPVGSGKTALLLQLCRHLASKYS 123
                 56677899999999*********************95 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   2.2e-05      0.04       1      44 [.      97     144 ..      97     204 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 2.2e-05
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf....gvnlrdvakenglllevdpe 44 
                 I++ G+ G+GKt l   L ++l++    gv+ +d+++ ++ ++   ++
  EPX70884.1  97 IGVGGPVGSGKTALLLQLCRHLASkysiGVVTNDIFTREDQEFLIRNQ 144
                 89**********998888888755668899999999988877777766 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   3.3e-05     0.058      29      60 ..      90     121 ..      82     135 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 3.3e-05
      AAA_25  29 llpagelallaGapgtGKttlaldlalavatG 60 
                 + ++  ++ + G+ g+GKt+l+l+l+ ++a+ 
  EPX70884.1  90 FARRSFTIGVGGPVGSGKTALLLQLCRHLASK 121
                 55666777799*****************9974 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   5.5e-05     0.099       5      32 ..      99     126 ..      96     204 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 5.5e-05
                 EEC-TTTCHHHHHHHHHHHHCTS-SCCC CS
       NACHT   5 lqGeaGsGKTtLlqklalawaegklpqg 32 
                 + G+ GsGKT+Ll +l++ +a+++  ++
  EPX70884.1  99 VGGPVGSGKTALLLQLCRHLASKYSIGV 126
                 7799*****************9987765 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00013      0.23       6      46 ..     101     143 ..      99     197 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00013
                 --SSSSHHHHHHHGGGGB..S--EEEEE--TT--HHHHH--B- CS
       AAA_5   6 GppGtgKselaerlaaal..nreveyvqltrdtteedlkgrre 46 
                 Gp G+gK+ l  +l++ l  + ++ +v +  +t+e++ +  r+
  EPX70884.1 101 GPVGSGKTALLLQLCRHLasKYSIGVVTNDIFTREDQEFLIRN 143
                 9*****************7777777788888888877665555 PP

>> MobB  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?  -10.0  10.0        10   1.8e+04      35      53 ..      21      39 ..       8      41 .. 0.74
   2 ?    8.9   0.0   0.00071       1.3       2      33 ..      97     127 ..      96     135 .. 0.84
   3 ?   -1.3   0.0         1   1.8e+03      72      97 ..     166     190 ..     159     192 .. 0.75

  Alignments for each domain:
  == domain 1  score: -10.0 bits;  conditional E-value: 10
        MobB 35 hahhgfdvdkpgkDsyrhr 53
                h+hhg++ ++ g D ++h+
  EPX70884.1 21 HDHHGHHDHHGGHDHHHHH 39
                6777777777788877775 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00071
        MobB   2 lgivgksgsGKTtLleklipelkarglrvgti 33 
                 +g+ g  gsGKT+Ll +l ++l++ ++++g++
  EPX70884.1  97 IGVGGPVGSGKTALLLQLCRHLAS-KYSIGVV 127
                 5677889**************975.6888887 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 1
        MobB  72 keleeaelsleellarlsevDlvlvE 97 
                 ++++++ ++leel a + ++Dl++vE
  EPX70884.1 166 EDVSANLVALEELHAEF-QTDLLFVE 190
                 44466677899999999.79**9999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       492  (0.0274416); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        86  (0.0047967); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 2195.50
//
Query:       EPX70885.1  [L=70]
Description: hypothetical protein SOCG_04073 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       662  (0.0369234); expected 358.6 (0.02)
Passed bias filter:                      267  (0.0148921); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.23s 00:00:00.57 Elapsed: 00:00:00.39
# Mc/sec: 543.12
//
Query:       EPX70886.1  [L=126]
Description: hypothetical protein SOCG_04072 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       768  (0.0428356); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.26s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 935.25
//
Query:       EPX70887.1  [L=107]
Description: hypothetical protein SOCG_04071 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.081   12.9   0.5      0.086   12.9   0.5    1.1  1  RXT2_N    RXT2-like, N-terminal
       0.26   11.1   0.6       0.43   10.4   0.6    1.3  1  DUF5113   Domain of unknown function (DUF5113)


Domain annotation for each model (and alignments):
>> RXT2_N  RXT2-like, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.5   9.6e-06     0.086      58      96 ..      25      62 ..       2      86 .. 0.64

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 9.6e-06
      RXT2_N 58 ekeekeeeeedeegdeededdddeeeaeaaeenpykkvr 96
                 + e+  +++d++++++ ed+d++ +++ ++ np k+v+
  EPX70887.1 25 VRFETPVKDDDDDEYHNFEDSDSD-DQKFEDRNPRKRVD 62
                333334455555555555555543.56788889988886 PP

>> DUF5113  Domain of unknown function (DUF5113)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.6   4.8e-05      0.43     126     159 ..      71     104 ..      64     106 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 4.8e-05
     DUF5113 126 sycrqlersaknknvllilvvlllvvllvlyyll 159
                 ++ +++ +s+kn+ ++l+++++ ++ +l++++ l
  EPX70887.1  71 HRLNRISQSSKNTFLVLLVCFVFFFFILIGFFSL 104
                 688999**********************999877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1016  (0.056668); expected 358.6 (0.02)
Passed bias filter:                      584  (0.0325729); expected 358.6 (0.02)
Passed Vit filter:                        68  (0.00379274); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 810.03
//
Query:       EPX70888.1  [L=626]
Description: ATP-dependent RNA helicase Sum3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.7e-47  160.8   0.0    4.4e-47  160.1   0.0    1.3  1  DEAD           DEAD/DEAH box helicase
    1.7e-31  108.8   0.0    3.7e-31  107.7   0.0    1.6  1  Helicase_C     Helicase conserved C-terminal domain
  ------ inclusion threshold ------
      0.033   12.9   0.0       0.11   11.3   0.0    1.8  2  UTP25          Utp25, U3 small nucleolar RNA-associated SSU p
      0.077   13.0   0.0       0.23   11.4   0.0    1.8  1  ResIII         Type III restriction enzyme, res subunit
       0.13   11.5   0.0       0.19   10.9   0.0    1.2  1  ERCC3_RAD25_C  ERCC3/RAD25/XPB C-terminal helicase


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  160.1   0.0   1.2e-50   4.4e-47       1     174 [.     184     370 ..     184     372 .. 0.94

  Alignments for each domain:
  == domain 1  score: 160.1 bits;  conditional E-value: 1.2e-50
                 -HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHS................TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEET CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   1 tdiQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyet................kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliig 83 
                 t++Q+++ip++ +g+d++++a+TGsGKT+ fl+p+l+  +++                 +k  p +li++PtreL+ q++++ +kf+    +r ++++g
  EPX70888.1 184 TPVQKNSIPIVTSGRDLMACAQTGSGKTAGFLFPILSLAFDKgpapipmdknagmgyrPRKAYPTTLILAPTRELVCQIHEESRKFCYRSWVRPCAVYG 282
                 89**********************************999998999999999999988878888*************************988******** PP

                 TSSHHHHHHHHHTTCSEEEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  84 gvaardqlskldngvdivvgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkdvk 174
                 g + r q++++d+g+d++ +tpgrl+dl+++g+++ls+++flVlDEadr+ld+gf+++i++i++   ++t+  +  rq++++SAT+p+d++
  EPX70888.1 283 GADIRAQIRTIDQGCDLLSATPGRLVDLIDRGRISLSNIKFLVLDEADRMLDMGFEPQIRQIVEGA-DMTDVAN--RQTLMFSATFPRDIQ 370
                 ****************************************************************99.4555544..77*********9986 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.7   0.0     1e-34   3.7e-31       2     111 .]     407     516 ..     406     516 .. 0.95

  Alignments for each domain:
  == domain 1  score: 107.7 bits;  conditional E-value: 1e-34
                 HHHHHHHHHHHTTTTSEEEEEESSHHHHHH.HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHH CS
  Helicase_C   2 kleallellkleeeggkilifvntidrlek.vklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvts 99 
                 k ++ll++l++  ++g +lifv+t+++++  +++ll+++ + ++ +hg+ +q+ere++l+ f++g++ +++at va+rG+dip+v++Vin+dlp+++++
  EPX70888.1 407 KRSYLLDILHTLPIEGLTLIFVETKRMADTlTDYLLTSN-FPATSIHGDRTQRERERALDLFRSGRTSIMVATAVASRGLDIPNVTHVINYDLPTDIDD 504
                 77899999999999**************99889997555.*********************************************************** PP

                 HHHHHTTSSSTT CS
  Helicase_C 100 yiqriGRtgRag 111
                 y++riGRtgRag
  EPX70888.1 505 YVHRIGRTGRAG 516
                 **********97 PP

>> UTP25  Utp25, U3 small nucleolar RNA-associated SSU processome protein 25
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.42   1.5e+03     215     258 ..     141     184 ..     139     187 .. 0.90
   2 ?   11.3   0.0     3e-05      0.11     330     413 ..     421     502 ..     392     520 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.42
       UTP25 215 lkhlnkipkeshdadfsrvrmwylddqakllRQtlvfssyetpe 258
                 +++ + ip e+ + +++ v ++      ++l Q++++s y++p+
  EPX70888.1 141 FEKYDDIPVEVSGGEVEPVHEFLSPPLNSHLLQNIFLSGYTQPT 184
                 677788999999***************************99985 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 3e-05
       UTP25 330 ssgiliyipsyfdfvrvrnylkeekvsfaaiseysskkevsraRelFfkgkkkvlLyteRlhffrRykikgvkkvilYklPenp 413
                 ++ +li++ +      +++yl ++++  ++i+   +++e +ra +lF +g++++++ t  +   r  +i +v +vi Y+lP+  
  EPX70888.1 421 EGLTLIFVETKRMADTLTDYLLTSNFPATSIHGDRTQRERERALDLFRSGRTSIMVATAVA--SRGLDIPNVTHVINYDLPTDI 502
                 66789999988888899*****************************************876..599***************975 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   6.5e-05      0.23      28     170 ..     201     366 ..     181     367 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 6.5e-05
                 EEEESTTSTHHHHH.HHHHHHH-S.......................-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--........-SE CS
      ResIII  28 likmaTGtGKTlva.aklierllkkgkee..................kflflvprkslleqtleefkkflseaykeigkkvsgdkkka.kekdstnkki 106
                 +  + TG+GKT    + +    + kg+                     +l+l+p+++l+ q  ee +kf      + + ++ g   +a  +  ++ +++
  EPX70888.1 201 MACAQTGSGKTAGFlFPILSLAFDKGPAPipmdknagmgyrprkaypTTLILAPTRELVCQIHEESRKFCYRSWVRPCAVYGGADIRAqIRTIDQGCDL 299
                 56678*******99566677777888877************************************9999888766656655555554434455777888 PP

                 EEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS....TTTHHH.....HHT---SEEEEEESS-S CS
      ResIII 107 lvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgak...kswrei.....lekfkeavllglTATpe 170
                 l +t  +l   +     ++ + + +++++++ DEa r+ ++    ++r+i     +  + +   l ++AT++
  EPX70888.1 300 LSATPGRLVDLI-----DRGRISLSNIKFLVLDEADRMLDMgfePQIRQIvegadMTDVANRQTLMFSATFP 366
                 888888888888.....7788888888899999999999986655888875664433345588888999986 PP

>> ERCC3_RAD25_C  ERCC3/RAD25/XPB C-terminal helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   5.4e-05      0.19      81     132 ..     447     497 ..     436     527 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 5.4e-05
  ERCC3_RAD25_C  81 kkpyiyGetseaerlkilqkfkknpkvntiflskvgDtsiDlPeanvliqis 132
                      + i+G+ +++er + l+ f++  +++ ++   v+   +D+P+ + +i  +
     EPX70888.1 447 PATSIHGDRTQRERERALDLFRSG-RTSIMVATAVASRGLDIPNVTHVINYD 497
                    56679****************987.567777889************999765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (626 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       419  (0.02337); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.58u 0.23s 00:00:00.81 Elapsed: 00:00:00.41
# Mc/sec: 4579.15
//
Query:       EPX70889.1  [L=232]
Description: Sed5 Vesicle protein Svp26 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.1e-67  225.7   5.1    5.9e-67  225.5   5.1    1.0  1  Erv26     Transmembrane adaptor Erv26
  ------ inclusion threshold ------
       0.18   10.7   0.0       0.23   10.4   0.0    1.1  1  DUF1509   Protein of unknown function (DUF1509)


Domain annotation for each model (and alignments):
>> Erv26  Transmembrane adaptor Erv26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  225.5   5.1   6.6e-71   5.9e-67       1     204 [.       1     208 [.       1     210 [. 0.92

  Alignments for each domain:
  == domain 1  score: 225.5 bits;  conditional E-value: 6.6e-71
       Erv26   1 mwilellsylglvlgflfltlaiasgLyYlsElvEEhtvlakrllkrliyaiiaiqvllllvdkfpltltllsivshvvylqnlrrfPvvkltdplfll 99 
                 m +l+ lsylg++lgf+ ltl+ias+LyY+sE++EEht+lak +l+rl y+i++  +ll+l+d+fp++l+++si+s+++y  n+++fP++++ +  fll
  EPX70889.1   1 MLVLNCLSYLGVILGFVGLTLSIASALYYVSEFIEEHTKLAKAFLTRLAYFIMGTLFLLALLDGFPFWLCAFSIFSNYIYKLNFDTFPFFSFRRLRFLL 99 
                 889************************************************************************************************ PP

       Erv26 100 scvlvvlnhylwfrhFskkqarlkke.ssy....ykkkkdvpsfteiasffglcvWlvPfalfvsLsAgdnvLPtmgsesasgessssssesekkkkkk 193
                 +c+l+++nh+lw+r+F+++++  +++  +y    ++ ++ +++f+++asf+g+cvW vP+ +fvs++A+dn LPt+   ++s++s    ++s++++ ++
  EPX70889.1 100 ACALIIINHLLWVRFFQTHEFPSRPRgVTYdflgQRVATYRATFSQVASFMGICVWSVPIGIFVSFTAADNALPTTIAANSSESS-PYPDTSSHHQVRA 197
                 *******************9999999888888764445559***********************************887777555.5556667888888 PP

       Erv26 194 kgllkavvdkv 204
                  ++l+++++kv
  EPX70889.1 198 PNVLRQMYKKV 208
                 99999998876 PP

>> DUF1509  Protein of unknown function (DUF1509)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   2.6e-05      0.23     100     165 ..     135     199 ..     108     211 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 2.6e-05
     DUF1509 100 rlegenhffapilglysvvmtwspiscyrefpirqnskepdpqpstssepepqpstsshrnipvar 165
                 r+      f+ +  +  + +   pi  +  f   +n+  p    + sse  p p tssh+++    
  EPX70889.1 135 RVATYRATFSQVASFMGICVWSVPIGIFVSFTAADNA-LPTTIAANSSESSPYPDTSSHHQVRAPN 199
                 555555666666666666555559*******999987.589999***************9986554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       619  (0.0345251); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 1627.49
//
Query:       EPX70890.1  [L=522]
Description: aspartic protease Yps1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-33  116.9   4.2    1.5e-33  116.5   4.2    1.1  1  Asp       Eukaryotic aspartyl protease
    2.2e-07   31.3   1.7    1.6e-06   28.5   0.1    3.0  3  TAXi_N    Xylanase inhibitor N-terminal


Domain annotation for each model (and alignments):
>> Asp  Eukaryotic aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.5   4.2   1.7e-37   1.5e-33       2     315 .]      72     417 ..      71     417 .. 0.86

  Alignments for each domain:
  == domain 1  score: 116.5 bits;  conditional E-value: 1.7e-37
                 EEEEEEETTTTEEEEEEEETT--SEEEEBTT...........................ESTSHCHHTSS-B-..GGG-TT-EEEEEEEEEECTTS.EEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...........................xxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxx.xxx RF
         Asp   2 YfgeisiGtpeqkftvifDTGSsdlWVpssk...........................ckkssackshstyd..pskSstykkngkslsisYGdg.svs 70 
                 Y +++ iG p   + v +D   +++W +  +                           c++    ks s+y+  +s S ++ ++ k+  i+Y d+ +v 
  EPX70890.1  72 YTTTLCIGQPAVPYVVAVDLDMPYTWLTYYNvlsfnptflgidvegsqwssdelryflCDI---NKSDSCYTgnSSLSFSFMTDPKTYLIKYDDNiTVA 167
                 999*************************999***************999999998888774...355666651155566777999************** PP

                 EEEEEEEEEET.TEEEEEEEEEEEEEESSHHHTTSSSSEEEE-S....-GGGSCGG....SCCH..HHHHHHTTSSSSSEEEEEE-STTSSEEEEEESS CS
                 xxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxx....xxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         Asp  71 Gflsqdtvkvg.gltvknqefgeatkepgstflaakfdGiLGlg....fkeisvee....atpv..fdnlvsqglikepvfsvylnreeeeggeivfGg 158
                 G+++qd+   +    ++n++fg   ke+++ +   + +G+LGl+    +++i+ ++    ++p+   d+lv+ +++++p fs+ ++   +  g++++G+
  EPX70890.1 168 GVNVQDSLVYShYHELNNFQFGITLKEYVP-ASLLPYKGVLGLAapseINSIDFVDsissFKPPtfLDQLVQSEILSTPTFSLSFD--ASGNGTLLLGA 263
                 ******9655505689*************7.55666********7666444444446655343345899***************96..999******** PP

                 EEGGGEEEEEEEEEESSTSSTEEEEEEEEETTEEE..EEEEEEEEEEETTCSSEEEEHHHHHHHHHHHTTEEEETTCEEEEETTGGGGSEEEEEEET.T CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.x RF
         Asp 159 vDeskykGsltyvpvtskgywqielesvtvggktv..lcssgcqailDtGTsllalptsivekiakaigakksesegeyvvdCdslsslpdisftig.g 254
                 vD +ky+G l++ + t+++ ++ +l sv+++++t+    s  ++a+l t   +++lp +i  ++++ +g+    + g+ +v C+s+ + + ++f++g +
  EPX70890.1 264 VDGTKYTGPLVTHKQTRSRHYSTTLYSVQYTNSTFsaNYSLVVDAFLQTRELFIYLPYDISYALTDLMGGF-IAY-GYLAVPCNSFDDRSGVNFQFGcN 360
                 ***********************************5444556788899999**************999995.556.8*******************725 PP

                 EEEEEEGGGGEEEESSSTTSEEEESEEECCTSSSEEEEHHHHTTEEEEEETTTTEEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         Asp 255 akitvpvselvlkeeeseesqCilglvseeegdlwiLGdvFlrsayvvfdldnnrvglAea 315
                  +i +++s lv ++ +   ++Cilg+  + ++++ +LG +F rsay+vf  +++++++A+a
  EPX70890.1 361 STIFMKTSMLVTQRID---NICILGI-RPTSSSQAVLGLTFFRSAYTVFHQKAKTISIAQA 417
                 6677777888888876...79*****.9999****************************96 PP

>> TAXi_N  Xylanase inhibitor N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.5   0.1   1.8e-10   1.6e-06       1     177 [.      72     262 ..      72     263 .. 0.76
   2 ?   -2.5   0.1      0.57   5.1e+03      70     101 ..     278     309 ..     273     315 .. 0.68
   3 ?    0.1   0.0     0.091   8.2e+02      81     123 ..     321     365 ..     317     392 .. 0.69

  Alignments for each domain:
  == domain 1  score: 28.5 bits;  conditional E-value: 1.8e-10
      TAXi_N   1 YlvsisiGtppqplklvvDtGsdltWvqCkpcka...cssqkkpvfdpsksstykavpcssslCkac.easssaksgsssstceyeisygadgssssGv 95 
                 Y++++ iG+p++p+ ++vD+   +tW++  +  +   ++   ++  ++ +s + + + c+ ++  +c + +ss + +  +++ +y i+y  d+ +++Gv
  EPX70890.1  72 YTTTLCIGQPAVPYVVAVDLDMPYTWLTYYNVLSfnpTFLGIDVEGSQWSSDELRYFLCDINKSDSCyTGNSSLSFSFMTDPKTYLIKYD-DNITVAGV 169
                 99*************************9966555444444555555666777778888888888888788888899999**********5.******** PP

      TAXi_N  96 latdtltlsstdgksvkvpnlvfGCgk.snlgglaagadGilGLGrgk................lSlvsqlaskg.slgnkFsyCLssssssssgvlff 176
                  ++d+l  s    +  +++n+ fG +  +    +    +G+lGL+  +                  +++ql +++   + +Fs+ +   ++s++g l++
  EPX70890.1 170 NVQDSLVYS----HYHELNNFQFGITLkEYVPASLLPYKGVLGLAAPSeinsidfvdsissfkpPTFLDQLVQSEiLSTPTFSLSF---DASGNGTLLL 261
                 ********4....5699*******98753333333369******987667776776666666666666666666634455677766...7777777776 PP

      TAXi_N 177 G 177
                 G
  EPX70890.1 262 G 262
                 6 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.57
      TAXi_N  70 aksgsssstceyeisygadgssssGvlatdtl 101
                 ++++++ st  y+++y++ + s++  l+ d++
  EPX70890.1 278 QTRSRHYSTTLYSVQYTNSTFSANYSLVVDAF 309
                 45666777888888887555566666666665 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.091
      TAXi_N  81 yeisyg.adgssssGvlatdtltlsstdgksvkvpnlvfGCgk...s 123
                 y+isy+ +d     G++a   l+++ ++ +  +  n+ fGC +    
  EPX70890.1 321 YDISYAlTD--LMGGFIAYGYLAVPCNSFDDRSGVNFQFGCNStifM 365
                 788887444..4778888888888777557777779*****875542 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (522 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       480  (0.0267723); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 3705.21
//
Query:       EPX70891.1  [L=972]
Description: NuA4 histone acetyltransferase complex subunit Vid21 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.5e-15   57.2   0.1    1.1e-14   54.4   0.0    2.6  2  HSA              HSA
    1.5e-11   44.4   0.1    6.2e-11   42.4   0.1    2.2  1  Myb_DNA-bind_6   Myb-like DNA-binding domain
    0.00049   20.2   0.2     0.0011   19.1   0.2    1.5  1  Myb_DNA-binding  Myb-like DNA-binding domain


Domain annotation for each model (and alignments):
>> HSA  HSA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       1.9   1.1e+04      43      58 ..     214     229 ..     213     231 .. 0.82
   2 !   54.4   0.0   1.9e-18   1.1e-14       9      67 ..     476     534 ..     469     537 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 1.9
                 HHHHHH--XXXXXXXX CS
         HSA  43 avakyhnniekeeqkr 58 
                 av++  + ++k+eq+ 
  EPX70891.1 214 AVLQLTKTQQKDEQRD 229
                 7888889999999985 PP

  == domain 2  score: 54.4 bits;  conditional E-value: 1.9e-18
                 X--HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH--XXXXXXXXXXXXXXXXX CS
         HSA   9 kthhdylLeeilwhakdfkeerkskrakakklaravakyhnniekeeqkriereekerl 67 
                 kthhdylL+e++w++ df +er++k+  ak++  +v++yhn   k  ++     +k+++
  EPX70891.1 476 KTHHDYLLDEMQWMSIDFSQERRWKIVLAKQIVDSVMNYHNTSDKSTVCTPASLSKNKR 534
                 9******************************************9998888777777765 PP

>> Myb_DNA-bind_6  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.4   0.1     1e-14   6.2e-11       1      53 [.     712     773 ..     712     779 .. 0.94

  Alignments for each domain:
  == domain 1  score: 42.4 bits;  conditional E-value: 1e-14
  Myb_DNA-bind_6   1 WteeEdeiLlklvekygndWknIaealn..........rRtpkqcfdrwknkLrpkisrkkws 53 
                     W +eEde+Ll l ++y+++W+ Ia++l           rRt+++cf+rw++ ++p+  + +++
      EPX70891.1 712 WLPEEDELLLLLLRQYSFNWEFIANQLTpsglyvpnteRRTAWDCFERWIQ-IDPQAGNVQFT 773
                     889************************66**********************.***99888887 PP

>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.2   1.8e-07    0.0011       4      44 ..     712     762 ..     711     763 .. 0.87

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 1.8e-07
                      SBHHHHHHHHHHHHHHTTCHHHHHH.......HHTS...S-HHHHHHHHHH CS
  Myb_DNA-binding   4 WteeEdelLleavkkhGnrWkkIae.......rlgg...Rtekqcrsrwrn 44 
                      W +eEdelLl +++++  +W+ Ia+       ++++   Rt+ +c +rw +
       EPX70891.1 712 WLPEEDELLLLLLRQYSFNWEFIANqltpsglYVPNterRTAWDCFERWIQ 762
                      99***********************66666666663788**********76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (972 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1239  (0.0691059); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.75u 0.30s 00:00:01.05 Elapsed: 00:00:00.49
# Mc/sec: 5992.60
//
Query:       EPX70892.1  [L=148]
Description: ribosomal protein subunit S37 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.4e-24   86.2   0.1    1.4e-22   80.4   0.1    2.1  1  Ribosomal_S13  Ribosomal protein S13/S18
      0.004   16.0   0.0     0.0043   15.9   0.0    1.1  1  FbpA           Fibronectin-binding protein A N-terminus (FbpA


Domain annotation for each model (and alignments):
>> Ribosomal_S13  Ribosomal protein S13/S18
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.4   0.1   1.6e-26   1.4e-22       2     128 .]       4     108 ..       3     108 .. 0.98

  Alignments for each domain:
  == domain 1  score: 80.4 bits;  conditional E-value: 1.6e-26
  Ribosomal_S13   2 ilgtdidgkkkveialtaikGiGrrkakiilkkadvdedkrigelteeeiekieeivenkaqykipnwinrqkdikdGkdshvvendlrrklredi 97 
                    ilg+ i++++ v++al   +GiGr  a++i++++    + +++elt+ ++  + ++++n                      +++e+dl+r++ ++i
     EPX70892.1   4 ILGVPIKDERPVKYALLGFYGIGRAVAEKICARLSFHDTLKVKELTDGQLTSLSQLLSN----------------------MTIEGDLKRQRDANI 77 
                    78999******************************************************......................89************* PP

  Ribosomal_S13  98 eRlkkirsyrGlRHkrGlkvRGQrTkttgRt 128
                     R  +irsyrGlRH  Gl+v GQ+T+t+++t
     EPX70892.1  78 SRFYTIRSYRGLRHAAGLPVHGQNTRTNAKT 108
                    ****************************987 PP

>> FbpA  Fibronectin-binding protein A N-terminus (FbpA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   4.8e-07    0.0043     189     239 ..      15      64 ..       7     122 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 4.8e-07
                 XHHHHHHHBTTXXHHHHHHHHTTXSSSH...............HHHHHHHH CS
        FbpA 189 lvkaLvkafqGlspllaeelleragldketsakelseedlerlyealqell 239
                 ++ aL+  + G+++++ae +++r+++ ++ ++kel++ +l++l + l+++ 
  EPX70892.1  15 VKYALLGFY-GIGRAVAEKICARLSFHDTLKVKELTDGQLTSLSQLLSNMT 64 
                 445566556.*********************************99998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       431  (0.0240393); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 1035.54
//
Query:       EPX70893.1  [L=213]
Description: P-factor pheromone Map2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.1e-06   26.5   0.3        3.6    7.7   0.0    4.4  4  Spectrin_like  Spectrin like domain
    0.00032   20.3  11.7        1.8    8.0   0.1    4.3  4  HPS3_N         Hermansky-Pudlak syndrome 3
    0.00045   20.3   0.2         18    5.6   0.0    4.0  4  IGR            IGR protein motif
  ------ inclusion threshold ------
      0.014   15.6   0.6         40    4.5   0.0    3.7  4  PB1-F2         Influenza A Proapoptotic protein
        1.1    9.5   2.1        1.5    9.0   2.1    1.2  1  DIM            DIM protein
        1.3    7.8   7.0         35    3.1   0.0    4.0  5  DUF4781        Domain of unknown function (DUF4781)
        1.4    9.2  29.3         11    6.4   0.6    5.1  5  PHINT_rpt      Phage-integrase repeat unit


Domain annotation for each model (and alignments):
>> Spectrin_like  Spectrin like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.0    0.0027       6.8      38      63 ..      37      62 ..      28      65 .. 0.86
   2 ?    3.0   0.0     0.041   1.1e+02      39      63 ..      72      96 ..      67     102 .. 0.87
   3 !    7.7   0.0    0.0014       3.6      39      63 ..     106     130 ..      96     134 .. 0.89
   4 ?    3.4   0.0     0.032        82      39      63 ..     140     164 ..     135     180 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0027
  Spectrin_like 38 lhyqdFlrdSqeSelFteedrkqler 63
                     y+dFlr  ++ + F++ dr  l++
     EPX70893.1 37 KTYEDFLRVYKNWQTFQNPDRPDLKK 62
                   47******************998876 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.041
  Spectrin_like 39 hyqdFlrdSqeSelFteedrkqler 63
                    y+dFlr  ++   F++ dr  l++
     EPX70893.1 72 TYEDFLRVYKNWWSFQNPDRPDLKK 96
                   7****************99998875 PP

  == domain 3  score: 7.7 bits;  conditional E-value: 0.0014
  Spectrin_like  39 hyqdFlrdSqeSelFteedrkqler 63 
                     y+dFlr  q+ e F++ dr  l++
     EPX70893.1 106 TYEDFLRVYQNWETFQNPDRPDLKK 130
                    7******************998876 PP

  == domain 4  score: 3.4 bits;  conditional E-value: 0.032
  Spectrin_like  39 hyqdFlrdSqeSelFteedrkqler 63 
                     y+dFlr  ++   F++ dr  l++
     EPX70893.1 140 TYEDFLRVYKNWWSFQNPDRPDLKK 164
                    7****************99998875 PP

>> HPS3_N  Hermansky-Pudlak syndrome 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.0   0.1     0.003       7.8      85      99 ..      40      54 ..      29      72 .. 0.80
   2 !    5.7   0.3    0.0036       9.3      85      99 ..      74      88 ..      64     102 .. 0.80
   3 !    8.0   0.1   0.00071       1.8      84      99 ..     107     122 ..      95     140 .. 0.78
   4 !    6.9   0.2    0.0016       4.1      85      99 ..     142     156 ..     133     210 .. 0.71

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.003
      HPS3_N 85 atfvRvYvNWesqsk 99
                  f+RvY NW++ ++
  EPX70893.1 40 EDFLRVYKNWQTFQN 54
                579*******98764 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0036
      HPS3_N 85 atfvRvYvNWesqsk 99
                  f+RvY NW+s ++
  EPX70893.1 74 EDFLRVYKNWWSFQN 88
                579*******99764 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.00071
      HPS3_N  84 datfvRvYvNWesqsk 99 
                    f+RvY+NWe+ ++
  EPX70893.1 107 YEDFLRVYQNWETFQN 122
                 5679********8764 PP

  == domain 4  score: 6.9 bits;  conditional E-value: 0.0016
      HPS3_N  85 atfvRvYvNWesqsk 99 
                   f+RvY NW+s ++
  EPX70893.1 142 EDFLRVYKNWWSFQN 156
                 579********9775 PP

>> IGR  IGR protein motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.6   0.0    0.0069        18      11      38 ..      39      66 ..      37      69 .. 0.89
   2 ?    2.1   0.0     0.082   2.1e+02      11      37 ..      73      99 ..      70     107 .. 0.83
   3 !    5.5   0.0    0.0069        18      11      38 ..     107     134 ..     104     137 .. 0.89
   4 ?    2.1   0.0     0.083   2.1e+02      11      37 ..     141     167 ..     138     175 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0069
         IGR 11 ceehaekfeswekLfelsskqlkelGip 38
                +e ++  +++w+ + + +  +lk+  +p
  EPX70893.1 39 YEDFLRVYKNWQTFQNPDRPDLKKRDVP 66
                677888999***************9887 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.082
         IGR 11 ceehaekfeswekLfelsskqlkelGi 37
                +e ++  +++w ++ + +  +lk+  +
  EPX70893.1 73 YEDFLRVYKNWWSFQNPDRPDLKKRDV 99
                6778889999*************9887 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.0069
         IGR  11 ceehaekfeswekLfelsskqlkelGip 38 
                 +e ++  +++we + + +  +lk+  +p
  EPX70893.1 107 YEDFLRVYQNWETFQNPDRPDLKKRDVP 134
                 677888999***************9887 PP

  == domain 4  score: 2.1 bits;  conditional E-value: 0.083
         IGR  11 ceehaekfeswekLfelsskqlkelGi 37 
                 +e ++  +++w ++ + +  +lk+  +
  EPX70893.1 141 YEDFLRVYKNWWSFQNPDRPDLKKRDV 167
                 6778889999*************9887 PP

>> PB1-F2  Influenza A Proapoptotic protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0      0.11   2.7e+02      57      75 ..      45      63 ..      38      68 .. 0.83
   2 ?    4.5   0.0     0.016        40      57      75 ..      79      97 ..      70     103 .. 0.87
   3 ?   -0.7   0.0      0.68   1.7e+03      58      75 ..     114     131 ..     108     135 .. 0.81
   4 ?    4.5   0.0     0.016        41      57      75 ..     147     165 ..     140     172 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.11
                HHHHHHTTHHHCHHHHHHH CS
      PB1-F2 57 ywkqwlslknpilvslktr 75
                 +k+w +++np +  lk r
  EPX70893.1 45 VYKNWQTFQNPDRPDLKKR 63
                4799999999999998887 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.016
                HHHHHHTTHHHCHHHHHHH CS
      PB1-F2 57 ywkqwlslknpilvslktr 75
                 +k+w s++np +  lk r
  EPX70893.1 79 VYKNWWSFQNPDRPDLKKR 97
                579**********999998 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.68
                 HHHHHTTHHHCHHHHHHH CS
      PB1-F2  58 wkqwlslknpilvslktr 75 
                 +++w +++np +  lk r
  EPX70893.1 114 YQNWETFQNPDRPDLKKR 131
                 578999999999988887 PP

  == domain 4  score: 4.5 bits;  conditional E-value: 0.016
                 HHHHHHTTHHHCHHHHHHH CS
      PB1-F2  57 ywkqwlslknpilvslktr 75 
                  +k+w s++np +  lk r
  EPX70893.1 147 VYKNWWSFQNPDRPDLKKR 165
                 579**********999998 PP

>> DIM  DIM protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   2.1    0.0006       1.5       1      23 [.       1      20 [.       1      22 [. 0.84

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.0006
         DIM  1 MkcLsLlaflllllalaaanalp 23
                Mk++sL + ll+  ala+a + p
  EPX70893.1  1 MKFFSL-VALLF--ALASAAPIP 20
                ******.66666..*****9986 PP

>> DUF4781  Domain of unknown function (DUF4781)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0     0.014        35      31      41 ..      43      53 ..      32      57 .. 0.87
   2 ?    0.5   0.3     0.082   2.1e+02      31      41 ..      77      87 ..      72      91 .. 0.84
   3 ?    2.2   2.2     0.024        63      28      41 ..     108     121 ..      77     125 .. 0.65
   4 ?    0.6   0.2     0.079     2e+02      31      41 ..     145     155 ..     139     158 .. 0.84
   5 ?   -2.7   0.0      0.78     2e+03     154     182 ..     181     209 ..     176     211 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.014
     DUF4781 31 gRVYknwedyv 41
                 RVYknw+ + 
  EPX70893.1 43 LRVYKNWQTFQ 53
                7*******996 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.082
     DUF4781 31 gRVYknwedyv 41
                 RVYknw ++ 
  EPX70893.1 77 LRVYKNWWSFQ 87
                7******9885 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.024
     DUF4781  28 DetgRVYknwedyv 41 
                 ++  RVY+nwe + 
  EPX70893.1 108 EDFLRVYQNWETFQ 121
                 44589999999985 PP

  == domain 4  score: 0.6 bits;  conditional E-value: 0.079
     DUF4781  31 gRVYknwedyv 41 
                  RVYknw ++ 
  EPX70893.1 145 LRVYKNWWSFQ 155
                 7******9885 PP

  == domain 5  score: -2.7 bits;  conditional E-value: 0.78
     DUF4781 154 tdrearnswLgvaagvvglgaagataals 182
                 +d+e   ++L +    v + +++a + +s
  EPX70893.1 181 KDKEDYYHFLEFYVMNVPFNSTVAQTNIS 209
                 79999999999999999999999998887 PP

>> PHINT_rpt  Phage-integrase repeat unit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.6    0.0042        11      12      36 ..      31      58 ..      27      63 .. 0.82
   2 ?    5.9   1.3    0.0059        15      13      35 ..      66      91 ..      61     101 .. 0.77
   3 ?    4.9   0.3     0.013        33      16      36 ..     103     126 ..      97     130 .. 0.84
   4 ?    5.9   1.3    0.0059        15      13      35 ..     134     159 ..     129     169 .. 0.77
   5 ?    4.9   0.9     0.013        33      16      33 ..     171     192 ..     167     205 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0042
   PHINT_rpt 12 LpssPekiYaedwe...gWsgFLgkerp 36
                L + P+k+Y+++ +   +W+ F   +rp
  EPX70893.1 31 LDQLPSKTYEDFLRvykNWQTFQNPDRP 58
                6678********9988899999766666 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0059
   PHINT_rpt 13 pssPekiYaedwe...gWsgFLgker 35
                p+ P+k+Y+++ +   +W +F   +r
  EPX70893.1 66 PELPSKTYEDFLRvykNWWSFQNPDR 91
                77899******996667777755555 PP

  == domain 3  score: 4.9 bits;  conditional E-value: 0.013
   PHINT_rpt  16 PekiYaedwe...gWsgFLgkerp 36 
                 P+k+Y+++ +   +W+ F   +rp
  EPX70893.1 103 PAKTYEDFLRvyqNWETFQNPDRP 126
                 99******9999999999766666 PP

  == domain 4  score: 5.9 bits;  conditional E-value: 0.0059
   PHINT_rpt  13 pssPekiYaedwe...gWsgFLgker 35 
                 p+ P+k+Y+++ +   +W +F   +r
  EPX70893.1 134 PELPSKTYEDFLRvykNWWSFQNPDR 159
                 77899******996667777755555 PP

  == domain 5  score: 4.9 bits;  conditional E-value: 0.013
   PHINT_rpt  16 PekiYaedwe....gWsgFLgk 33 
                 P+k+Y+++ +    +++ FL  
  EPX70893.1 171 PAKTYEDFEQkdkeDYYHFLEF 192
                 99999999878888*****986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       311  (0.0173462); expected 358.6 (0.02)
Passed bias filter:                      216  (0.0120475); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.44u 0.29s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 1504.47
//
Query:       EPX70894.1  [L=190]
Description: uridylate kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-38  132.8   0.0    1.2e-38  132.5   0.0    1.0  1  ADK              Adenylate kinase
    8.8e-31  107.1   0.0    1.1e-30  106.8   0.0    1.1  1  AAA_17           AAA domain
    1.1e-08   35.6   0.0    1.7e-08   35.0   0.0    1.3  1  AAA_18           AAA domain
    7.6e-05   22.5   0.0      0.017   14.8   0.0    2.1  2  Thymidylate_kin  Thymidylate kinase
     0.0053   16.9   0.0     0.0086   16.2   0.0    1.5  1  AAA_33           AAA domain
  ------ inclusion threshold ------
       0.03   14.2   0.0      0.043   13.7   0.0    1.3  1  Ploopntkinase3   P-loop Nucleotide Kinase3


Domain annotation for each model (and alignments):
>> ADK  Adenylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.5   0.0   4.1e-42   1.2e-38       1     148 [.       7     162 ..       7     165 .. 0.95

  Alignments for each domain:
  == domain 1  score: 132.5 bits;  conditional E-value: 4.1e-42
                 EEESTTSSHHHHHHHHHHHHTSEEEEHHHHHHHHH.HCT-HHHHHHHHHHHTTSS--HHHHHHHHHHHHHCH..GTTTEEEEESB-SSHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxx RF
         ADK   1 llGaPgaGKGtqaeklvkkyglahlstGdllRaev.ksgtelGkeakevmdkgelvpdevvvklvkeeleke..dkkkgfllDGfPRtveqaealeell 96 
                 +lG+PgaGKGtq+++l++k+g+ah+s+Gd lR+e+ + +++ Gk +ke++  g++vp e++++l++ ++++   +  + fl+DGfPR+++q e +e+  
  EPX70894.1   7 VLGGPGAGKGTQCDRLTTKLGCAHISAGDCLREEQaRPDSNDGKLIKEYITDGKIVPMEITLRLLEAKMKSYslQGINTFLIDGFPRKMDQFEGFEK-- 103
                 79******************************9984569*******************************985566799****************99.. PP

                 HHHTSEESEEEEEE--HHHHHHHHHT.........GSHHHHHHHHHHHHHHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxxxxxxxxxxxxxxxxx RF
         ADK  97 eeekvkldlvleldvpeevlveRltg.........DneetvkkRletykkqtkplidyykk 148
                   +++  ++ l + + +e+++ Rl++         Dn +++kkR+ t++++++p+++  k+
  EPX70894.1 104 --AICPATVALFFYCGQEIMLARLMNrgktsgrddDNVDSIKKRFVTFTETSMPVVNALKN 162
                 ..89****************************************************98776 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.8   0.0   3.7e-34   1.1e-30       1     136 []       8     143 ..       8     143 .. 0.86

  Alignments for each domain:
  == domain 1  score: 106.8 bits;  conditional E-value: 3.7e-34
                 EE-TTSSHHHHHHHHHHHHTEEEEEHHHHHHHHHHTTTS...HSSHHHHCTSHHHHHHHHHHHHHHHHHHHH..HSSEEEEEE-SEEEETTEEEESSHH CS
      AAA_17   1 lGgPGsGKgtqceklvekygfthlsaGdllreeakrggl...akardemrklpleekkelqkeaaekiaeea..kkkgvlvdghprikeqagfldglpk 94 
                 lGgPG+GKgtqc++l  k+g  h+saGd lree++r  +   +  ++++ ++++++ + +++++++k++  +  + +++l+dg+pr   ++++++g++k
  EPX70894.1   8 LGGPGAGKGTQCDRLTTKLGCAHISAGDCLREEQARPDSndgKLIKEYITDGKIVPMEITLRLLEAKMKSYSlqGINTFLIDGFPR---KMDQFEGFEK 103
                 7*********************************99964222667888999999999999999999999988545577*******8...4677899997 PP

                 HHHHHH...SEEEEEE--HHHHHHHHHHH.TTST-TS-SHHHHH CS
      AAA_17  95 evleelkp.daiilleadpeeilerrlkd.rtrgrdddneesik 136
                      ++p ++ +++++ +e +l+r++++ +t+grdddn +sik
  EPX70894.1 104 ----AICPaTVALFFYCGQEIMLARLMNRgKTSGRDDDNVDSIK 143
                 ....56663677779999***********9************97 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.0   0.0   5.8e-12   1.7e-08       1     125 [.       5     140 ..       5     145 .. 0.91

  Alignments for each domain:
  == domain 1  score: 35.0 bits;  conditional E-value: 5.8e-12
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf.gvnlrdvakenglllevdpe.....aldeskrldedkldklldaleenssaleegknlvidghlaeleseaakd 93 
                 I++ G pG+GK t +++L  +lg+ ++  +d ++e++ + + ++       + + k++ ++ + +ll+a ++++s l+  ++ +idg++ ++ + + ++
  EPX70894.1   5 IFVLGGPGAGKGTQCDRLTTKLGCaHISAGDCLREEQARPDSNDGklikeYITDGKIVPMEITLRLLEAKMKSYS-LQGINTFLIDGFPRKMDQFEGFE 102
                 89************************************99999999999999**********9999999999998.8999999*********9666666 PP

      AAA_18  94 ikk......vvLtaspeelleRlekRgyeeakikenee 125
                 +         + ++  e++l Rl +Rg+++ +  +n +
  EPX70894.1 103 KAIcpatvaLFFYCGQEIMLARLMNRGKTSGRDDDNVD 140
                 5556***99999*******************9887765 PP

>> Thymidylate_kin  Thymidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   5.6e-06     0.017       4      58 ..      10      67 ..       8      89 .. 0.75
   2 !    5.9   0.0    0.0032       9.4     122     182 ..     112     179 ..      95     182 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 5.6e-06
                     STTSSHHHHHHHHHHHHHHTTE...EEEESSS..TTSHHHHHHHHHHHTCS---HHHHH CS
  Thymidylate_kin  4 lDGaGKttqaellkerlkeegik..vvltrep..ggteiGekirelllkeeeleeqtea 58
                       GaGK tq++ l  +l +++i+   +l+ e+   +++ G++i+e+++   ++ ++ + 
       EPX70894.1 10 GPGAGKGTQCDRLTTKLGCAHISagDCLREEQarPDSNDGKLIKEYIT-DGKIVPMEIT 67
                     569********************9778888863358999*********.5555444433 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0032
                      EEEESSHHHHHTSCCTTSS.......TTTSHHHHHHHHHHHHHHHHHHHHTTSTEEEEETTS-HHHHH CS
  Thymidylate_kin 122 flldvdpevalkRlakrde.......ldeeeeeqldflrkvrerylelakederiliidasksieevh 182
                      +++ +  e+ l+Rl+ r++       + + ++++  +++++     +++k+d+r ++i+a++  + v 
       EPX70894.1 112 LFFYCGQEIMLARLMNRGKtsgrdddNVDSIKKRFVTFTETSMPVVNALKNDNRCITINAEQDPDSVF 179
                      45556789999999999998886543225566666677777777777777899999999999887765 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   2.9e-06    0.0086       1      50 [.       4      57 ..       4     149 .. 0.57

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 2.9e-06
      AAA_33  1 lvllvGlpGsGKstlaerllkklgavllssdtlrr..rlfg..tdqqsktdytr 50
                ++++ G pG+GK t  +rl  klg+ ++s  +++r  + ++  +d + +++y++
  EPX70894.1  4 VIFVLGGPGAGKGTQCDRLTTKLGCAHISAGDCLReeQARPdsNDGKLIKEYIT 57
                7999************************99886663333334444444444444 PP

>> Ploopntkinase3  P-loop Nucleotide Kinase3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   1.4e-05     0.043       3      51 ..       2      50 ..       1      69 [. 0.78

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.4e-05
  Ploopntkinase3  3 arliylvGqPGaGkstlmaeltkgfdrskveqeeetvphdvlvdrttGe 51
                    +++i+++G PGaGk t    lt+ +   ++++ + +  ++   d  +G+
      EPX70894.1  2 YKVIFVLGGPGAGKGTQCDRLTTKLGCAHISAGDCLREEQARPDSNDGK 50
                    579********************99999888666544444445555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       450  (0.025099); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1429.18
//
Query:       EPX70895.1  [L=254]
Description: 20S proteasome component alpha 7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.3e-47  160.5   0.0    3.9e-47  160.2   0.0    1.1  1  Proteasome      Proteasome subunit
      9e-09   34.9   0.4    1.6e-08   34.0   0.4    1.5  1  Proteasome_A_N  Proteasome subunit A N-terminal signature
  ------ inclusion threshold ------
       0.13   12.5   0.1       0.33   11.2   0.1    1.7  1  Annexin_like    Annexin-like domain


Domain annotation for each model (and alignments):
>> Proteasome  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  160.2   0.0   6.6e-51   3.9e-47       1     190 []      30     215 ..      30     215 .. 0.98

  Alignments for each domain:
  == domain 1  score: 160.2 bits;  conditional E-value: 6.6e-51
                 HHHS-EEEEEEETTEEEEEEEEEEEETTEEEESSSSTSEEEEETTEEEEEEESHHHHHHHHHHHHHHHHHHHHHHSSGTCHHHHHHHHHHHHHHHHHHC CS
  Proteasome   1 vkkGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigvafaGlaaDartlvrraraeaqlyrlrygrpipverlvarvaaklqaytqrs 99 
                 v++G+t++Gik+kdgv+la +k +t  skll+++   +i  + +h+g+a++G ++D+  + +rar ea+ +r +yg  ip ++++ r+ +++q  t++s
  EPX70895.1  30 VENGSTCIGIKCKDGVILALEKVVT--SKLLKPRANPRIGSVGRHVGIATTGFIPDGMHILKRARDEANAWRDNYGSAIPGSVMADRIGNYVQLFTCYS 126
                 689**********************..************************************************************************ PP

                 TTTTTSEEEEEEEEETTTEEEEEEEETTSEEEEESSEEEESTTHHHHHHHHHHHHSTTBSHHHHHHHHHHHHHHHHHHBTTSCSSEEEEEE CS
  Proteasome 100 grrpfgvslliagvdeeggpeLyqidpsGsyieekdavaiGsgseaaktalekeykedltleeavelavkalkealerdklsgknievavi 190
                 ++rpfgv+  +a +d++g p+Ly+i+p+G y+++ + +++G+g++ a++ lek+ ++ l++++av+ a ++++++++++  +  +ie++++
  EPX70895.1 127 SVRPFGVMSFVAAYDDQG-PHLYMIEPNGVYWGY-NGISAGKGRQIARNELEKLDFSTLKMKDAVKEAARVIYATHDEEHNKDHEIEMTWV 215
                 ***************887.***************.7***************************************************9986 PP

>> Proteasome_A_N  Proteasome subunit A N-terminal signature
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.0   0.4   2.7e-12   1.6e-08       1      23 []       8      29 ..       8      29 .. 0.95

  Alignments for each domain:
  == domain 1  score: 34.0 bits;  conditional E-value: 2.7e-12
  Proteasome_A_N  1 YDrslttFSPdGRLfQVEYAmkA 23
                    YD+ l  FSPdGRLfQ EYA kA
      EPX70895.1  8 YDLGL-FFSPDGRLFQAEYAYKA 29
                    88888.9***************9 PP

>> Annexin_like  Annexin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   5.6e-05      0.33      16      45 ..     155     184 ..     151     226 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 5.6e-05
  Annexin_like  16 iynlynGytsGkeqqtayntlmelgallly 45 
                   +y  ynG ++Gk +q+a n l +l  ++l+
    EPX70895.1 155 VYWGYNGISAGKGRQIARNELEKLDFSTLK 184
                   8999****************9877666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       544  (0.0303419); expected 358.6 (0.02)
Passed bias filter:                      481  (0.026828); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1798.30
//
Query:       EPX70896.1  [L=358]
Description: UDP-galactose transporter Gms1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   4.6e-122  407.1  17.5   5.7e-122  406.8  17.5    1.0  1  Nuc_sug_transp  Nucleotide-sugar transporter
      4e-06   26.2  17.4    7.9e-06   25.3  17.4    1.5  1  UAA             UAA transporter family
    8.3e-06   26.0  28.2    0.00035   20.7   2.6    2.7  2  EamA            EamA-like transporter family
    7.6e-05   21.8   4.1    7.6e-05   21.8   4.1    2.0  2  CRT-like        CRT-like, chloroquine-resistance transporter-
     0.0012   18.3  14.3     0.0035   16.7  14.3    1.8  1  TPT             Triose-phosphate Transporter family
     0.0076   15.9   2.2     0.0076   15.9   2.2    2.5  2  EmrE            Putative multidrug resistance efflux transpor
  ------ inclusion threshold ------
      0.015   14.6  19.4      0.076   12.2  19.5    2.0  1  PUNUT           Purine nucleobase transmembrane transport


Domain annotation for each model (and alignments):
>> Nuc_sug_transp  Nucleotide-sugar transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  406.8  17.5  2.2e-125  5.7e-122       4     315 .]      14     324 ..      12     324 .. 0.97

  Alignments for each domain:
  == domain 1  score: 406.8 bits;  conditional E-value: 2.2e-125
  Nuc_sug_transp   4 klkyislvvlvvqnaslvltlrYartk..edkerylsttavllaeilklvvclllllkeekskv..kkllrelkkeilakpkdtlklavPsliYt 94 
                      +kyi+l++l++qn++l+ltl+Y+r++  + ++ry+++tavll+e++kl vc+++ +++ + +v  ++ lr++  +i+    d++kl +P+++Yt
      EPX70896.1  14 PMKYIALALLTIQNSALILTLNYSRIMpgYADKRYFTSTAVLLNELIKLSVCFVVGYYQFRRNVgsEARLRTFLPQIFG--GDSWKLGIPAFLYT 106
                     69*************************9999*****************************9998667888999999999..9************* PP

  Nuc_sug_transp  95 vqnnllyvalsnLdaatyqvtyqlkilttalfsvllLkrklskkqWlslllLvaGvalvqlkqkeseesekaaaaakeensvlGliavlaaclls 189
                     +qnnl+yva+ nL  a++qvtyqlkiltta+fsv lL+rkl  ++Wlsl++L+ G+a+vql++  s++++  +   ++ n+++G++avl+acl+s
      EPX70896.1 107 CQNNLQYVAAGNLSVAIFQVTYQLKILTTAIFSVALLHRKLGLTKWLSLFILTGGIAIVQLQNLASDSKSPVS---SSMNPLTGFTAVLIACLIS 198
                     ****************************************************************997777644...457**************** PP

  Nuc_sug_transp 190 gfaGvYfekiLkdsnvslWirniqlallsiilalltvllkdgskisekGffkGydlvvwvvvllqavGGlvvavvvkyaDnilkgfatslaiils 284
                     g+aGvYfek+Lk++n slW+rn+ql+++si+ +++t+l++d+s+i++kGff+Gy+ vvw+++llqa+GG++va++v +aDni+k+f+ts++iils
      EPX70896.1 199 GLAGVYFEKVLKGTNPSLWVRNVQLSFFSIVPCIFTILVSDYSNITQKGFFYGYNPVVWLAILLQAFGGIIVALCVAFADNIMKNFSTSISIILS 293
                     *********************************************************************************************** PP

  Nuc_sug_transp 285 tvasvllldlkitllFllGallviaavflYs 315
                     +++sv+lld+kit+ F++G+ lviaa+flY+
      EPX70896.1 294 SLVSVYLLDFKITFAFVVGVGLVIAATFLYT 324
                     ******************************7 PP

>> UAA  UAA transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3  17.4   3.1e-09   7.9e-06      71     300 ..     104     325 ..      95     327 .. 0.76

  Alignments for each domain:
  == domain 1  score: 25.3 bits;  conditional E-value: 3.1e-09
         UAA  71 lffitsvlnnealkydisvPvhiifrssklipvmilGililgkrYsllqylsvllltlGviiftllsakdkkedskeslnkfllGiallvlallldavl 169
                 l +  + l++ a +  +sv +  +    k++++ i ++ +l+++  l + ls+++lt G+ i+ l + +++++  ++s ++ l+G++ +++a l++++ 
  EPX70896.1 104 LYTCQNNLQYVAAGN-LSVAIFQVTYQLKILTTAIFSVALLHRKLGLTKWLSLFILTGGIAIVQLQNLASDSKSPVSSSMNPLTGFTAVLIACLISGLA 201
                 555566666666665.77777777777899***********************************9999998888999999****************** PP

         UAA 170 glvqeklykkygkh.skeal..fyshllslplfl.llqgellsavkflsesedvallslpsklfylllnvltqyvcikgVlilisefgaltvtlvltlR 264
                 g++ ek+ k  + + +  ++   +  ++++++++ +   + +++  f+   ++v      + ++  ++  ++ ++c+ +    +++f++ + +++    
  EPX70896.1 202 GVYFEKVLKGTNPSlWVRNVqlSFFSIVPCIFTIlVSDYSNITQKGFFYGYNPVVW----LAILLQAFGGIIVALCVAFADNIMKNFSTSI-SII---- 291
                 *********87766355554004445667777663333344555555555555552....2333344445566677777777777776654.444.... PP

         UAA 265 KfvslllSillFknpltlqhlvgtllVflglllysy 300
                   +s l+S++l + ++t+  +vg+ lV+ +++ly++
  EPX70896.1 292 --LSSLVSVYLLDFKITFAFVVGVGLVIAATFLYTK 325
                 ..68899**************************986 PP

>> EamA  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   2.6   1.4e-07   0.00035      77     135 ..     107     165 ..      94     167 .. 0.90
   2 !   10.2  17.9   0.00025      0.64       3     135 ..     187     323 ..     185     325 .. 0.73

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 1.4e-07
        EamA  77 lafllffyalkktsasnaslitslePvftlilsvlllgekltlkqllgivlillGvlli 135
                 + + l++ a  ++s+++  +   l  + t+i+sv+ll+ kl+l+++l++++   G++++
  EPX70896.1 107 CQNNLQYVAAGNLSVAIFQVTYQLKILTTAIFSVALLHRKLGLTKWLSLFILTGGIAIV 165
                 45578999999*********************************************987 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00025
        EamA   3 gillallaalfwaiyfvlskillrkvspl.tltfvrfliagilllii.allkegklaklslkd.......wlll.lllgllgtvlafllffyalkktsa 91 
                 g   +l+a+l++++++v+  ++l+ ++p  ++  v++ + +i+ +i+ +l+++ ++  +++k+       + +l +ll ++g++++ l+   a + ++ 
  EPX70896.1 187 GFTAVLIACLISGLAGVYFEKVLKGTNPSlWVRNVQLSFFSIVPCIFtILVSDYSN--ITQKGffygynpVVWLaILLQAFGGIIVALCVAFADNIMKN 283
                 66789**************9999999776577778877666666555333333333..34443344434444443445558999998888888888775 PP

        EamA  92 snaslitslePvftlilsvlllgekltlkqllgivlillGvlli 135
                       ts++ +++ + sv+ll  k+t+  ++g++l++++++l 
  EPX70896.1 284 F----STSISIILSSLVSVYLLDFKITFAFVVGVGLVIAATFLY 323
                 4....466788999999***********************9985 PP

>> CRT-like  CRT-like, chloroquine-resistance transporter-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   4.1     3e-08   7.6e-05      71     206 ..      98     238 ..      55     250 .. 0.87
   2 ?    0.9   0.7     0.069   1.8e+02      76     139 ..     261     324 ..     251     338 .. 0.71

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 3e-08
    CRT-like  71 FaimgaLDavsgilvvigavstsGslqvllnqaiipitllasllllkerysliqylGAlviilgvvvvlipsllgesse.....gnklvfnllllisvi 164
                   i ++L ++   l+ ++a ++s  + ++  q+ i  t ++s+ ll+++  l++ l  +++++g+++v  ++l+ +s++      n l     +li+++
  EPX70896.1  98 LGIPAFLYTCQNNLQYVAAGNLSVAIFQVTYQLKILTTAIFSVALLHRKLGLTKWLSLFILTGGIAIVQLQNLASDSKSpvsssMNPLTGFTAVLIACL 196
                 55667888999999***********************************************************99766533221354443344567788 PP

    CRT-like 165 PvalSnvykeiafkeveldvlyLqawvalfqlligilllpvn 206
                    l+ vy e ++k ++   +  ++  ++f ++ +i+++ v 
  EPX70896.1 197 ISGLAGVYFEKVLKGTNPSLWVRNVQLSFFSIVPCIFTILVS 238
                 8899**************************999999877665 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.069
    CRT-like  76 aLDavsgilvvigavstsGslqvllnqaiipitllasllllkerysliqylGAlviilgvvvvl 139
                  L a++gi+v +        ++ + + ++i ++ l+s+ ll  +  ++ ++G  ++i++ ++  
  EPX70896.1 261 LLQAFGGIIVALCVAFADNIMKNFSTSISIILSSLVSVYLLDFKITFAFVVGVGLVIAATFLYT 324
                 4777888888887777777777788888888888888888888877777777766666655544 PP

>> TPT  Triose-phosphate Transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7  14.3   1.4e-06    0.0035      56     289 ..      79     323 ..      46     324 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 1.4e-06
         TPT  56 k.......rpkisseflkailplalvktlghvlavvslskvaVSfthtvKasePiFtvilsrlllgeklsllvylsLlpivgGvalasvtElsFn.... 143
                 +        p+i     +++ + a++ t+ + l  v+ ++ +V   ++   ++ + t+i+s  ll  kl l+++lsL ++ gG+a+  ++ l  +    
  EPX70896.1  79 SearlrtfLPQIFGGDSWKLGIPAFLYTCQNNLQYVAAGNLSVAIFQVTYQLKILTTAIFSVALLHRKLGLTKWLSLFILTGGIAIVQLQNLASDsksp 177
                 15555555677777778888899999999999999*********99**99************************************9999885442333 PP

         TPT 144 .......ligfisAlisnltfslrnifsKkllkklkdldalnlfaiitilslllllPvallvegvlktpsllkstkvs..lkevllllllsgvlfhlyn 233
                        l+gf++ li+ l++ l +++  k+lk+    ++  l+     ls++ ++P ++ +       ++++++ ++  +  v+l +ll+++      
  EPX70896.1 178 vsssmnpLTGFTAVLIACLISGLAGVYFEKVLKG----TNPSLWVRNVQLSFFSIVPCIFTILV-SDYSNITQKGFFYgyNPVVWLAILLQAFG----G 267
                 333333479*************************....68999999999999999998665544.44555555554332255555666665532....2 PP

         TPT 234 qvaymvLervspvthsvantvKrvvvIvlsvlvfknpvsllnaiGtavaivGvflY 289
                 ++   +++   ++    + ++  +++  +sv ++  ++++  ++G+ ++i+ +flY
  EPX70896.1 268 IIVALCVAFADNIMKNFSTSISIILSSLVSVYLLDFKITFAFVVGVGLVIAATFLY 323
                 3333444555566666666777889999999************************* PP

>> EmrE  Putative multidrug resistance efflux transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   2.2     3e-06    0.0076      62     128 ..     125     197 ..     101     246 .. 0.80
   2 ?    2.3   2.6     0.042   1.1e+02      23      68 ..     280     324 ..     254     325 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 3e-06
        EmrE  62 AatwqitivagllllplfkrkkiplkalllsllillGvvlvqlee.....akel.slkelllgvlpvlvaafa 128
                   t+q+ i+++++ ++++ ++k+ l ++l  +++  G+ +vql++      + + s  + l+g+ +vl+a ++
  EPX70896.1 125 QVTYQLKILTTAIFSVALLHRKLGLTKWLSLFILTGGIAIVQLQNlasdsKSPVsSSMNPLTGFTAVLIACLI 197
                 5699999**********99*********99999999********9766542233133444999999**99876 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.042
        EmrE  23 llkelkkkplfwllwgsiGfglfYallcfaaayapgWlvAatwqit 68 
                 ++k++ ++ ++ +l + + + l+   ++fa   + g ++Aat+  t
  EPX70896.1 280 IMKNF-STSISIILSSLVSVYLLDFKITFAFVVGVGLVIAATFLYT 324
                 33333.34456788899999999999*****************877 PP

>> PUNUT  Purine nucleobase transmembrane transport
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2  19.5     3e-05     0.076      83     305 ..     103     318 ..      98     330 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 3e-05
       PUNUT  83 llvavdnllyslgllylpvstfslilatqLaFtaifsalinkqkftrfiinsvvlltisaallals...sssdkpaeeskkkyvigfiltlaasllfaL 178
                 +l+ ++n l  ++  +l+v +f +++  +++ taifs  + + k+     +s+++lt ++a++ l+   s+s++p ++s  + ++gf ++l+a l+ + 
  EPX70896.1 103 FLYTCQNNLQYVAAGNLSVAIFQVTYQLKILTTAIFSVALLHRKLGLTKWLSLFILTGGIAIVQLQnlaSDSKSPVSSS-MNPLTGFTAVLIACLISG- 199
                 7899**********************************************************99872214555555555.555677776666666555. PP

       PUNUT 179 lLslvellfekvlkket.fslvlemqivlslvatvvcvvGllisGefkelkkeaeeFkkGkslYvlvlvgsavswQvlavGavgL.vflvSslfsnvis 275
                    l  + fekvlk +    +v ++q+    ++ ++    +l+  ++ ++++      kG  + +  +v+ a+  Q++   +v+L v  +  ++ n  +
  EPX70896.1 200 ---LAGVYFEKVLKGTNpSLWVRNVQLSFFSIVPCIF--TILV-SDYSNITQ------KGFFYGYNPVVWLAILLQAFGGIIVALcVAFADNIMKNFST 286
                 ...6799999*99533336667777765554545544..4455.58888874......5666668889********99888888845568899999999 PP

       PUNUT 276 tvllpvvsvlavilfrdkfsa..vkgvallla 305
                 ++++ ++s++ v l++ k++   v gv l++a
  EPX70896.1 287 SISIILSSLVSVYLLDFKITFafVVGVGLVIA 318
                 99999999999999885554400444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       740  (0.0412739); expected 358.6 (0.02)
Passed bias filter:                      299  (0.0166769); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 2473.42
//
Query:       EPX70897.1  [L=409]
Description: CaCA proton/calcium exchanger [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-40  138.6  46.6    1.6e-20   73.6  17.6    2.9  3  Na_Ca_ex  Sodium/calcium exchanger protein


Domain annotation for each model (and alignments):
>> Na_Ca_ex  Sodium/calcium exchanger protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.1     0.012   2.2e+02      58      89 ..      38      69 ..      37      80 .. 0.76
   2 !   72.2  16.7   2.4e-24   4.3e-20       5     150 ..      80     233 ..      76     234 .. 0.91
   3 !   73.6  17.6   8.7e-25   1.6e-20       2     149 ..     261     403 ..     260     405 .. 0.90

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.012
                HHHTTTHHHHHHHHHHHHHHHHHTHHHHHHHH CS
    Na_Ca_ex 58 aaltgevdlaignvlGsnifnlllviGliali 89
                +++++++ l + +vl sn +n+ll+   i+l+
  EPX70897.1 38 SMARHNAILTTKSVLTSNYVNTLLIFVPIGLF 69
                68899999*************98875444443 PP

  == domain 2  score: 72.2 bits;  conditional E-value: 2.4e-24
                 HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHBTTSSCECCHHH CS
    Na_Ca_ex   5 lfilslllisvladflvssaeeiakslgisgsvlGltllAlgnslpElissiiaaltgevdlaignvlGsnifnlllviGlialigslkvdseslkldl 103
                 +f+l +l+i++l+++l+ ++e++a    +sg ++G +l+A +++++Eli+ i a+++ge++++ +++lGs++ nlllv G++++ ++  ++++   +++
  EPX70897.1  80 VFFLNMLAIIPLSSLLSFATEQLA---FVSGPTIGGLLNASFGNAIELIVGILALKRGEIRIVQASMLGSILSNLLLVFGMCLVTAG--IRRQIARFNV 173
                 799999******************...9*********************************************************99..4444557777 PP

                 .HHHHHHHHHHHHHHHHTCHHHHH.............HTEEHHHHHHHHHHHHHHHHHHHH CS
    Na_Ca_ex 104 .gllllvallllllvlllllplfv.............pgrltvleglvllllYalylvlsl 150
                   +  +va+l+l+++++ ++p+++               ++++ ++++ l++Y+l lv++l
  EPX70897.1 174 tVAQTMVAMLALSTASI-IIPAAFhfsvpdnkisetaLLQVSRGTAVIVLVVYLLLLVFQL 233
                 55777777777776665.8899999**********************************98 PP

  == domain 3  score: 73.6 bits;  conditional E-value: 8.7e-25
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHBTTSSCECC CS
    Na_Ca_ex   2 lfvlfilslllisvladflvssaeeiakslgisgsvlGltllAlgnslpElissiiaaltgevdlaignvlGsnifnlllviGlialigslkvdseslk 100
                 ++++++l ++++s++ad+lv s++ +++ ++is++++Gl++l+ + ++ E+++++++  +g++dla+g ++Gs i++ ++  ++ +++g++  ++++  
  EPX70897.1 261 SIFVLALVTVFVSLCADYLVGSIDDLVEEINISKTFVGLIILPVVANAAEHVTAVVVSYRGQMDLALGVAIGSSIQISMFLAPFLVIVGWFISQPLT-- 357
                 678999************************************************************************************7777755.. PP

                 HHHHHHHHHHHHHHHHHHHTCHHHHHHTEEHHHHHHHHHHHHHHHHHHH CS
    Na_Ca_ex 101 ldlgllllvallllllvlllllplfvpgrltvleglvllllYalylvls 149
                 l ++ l +v+l+++++++  +l+   +g   +leg+ ll+lYa++++ +
  EPX70897.1 358 LYFESLETVILFVSVFLVN-YLIQ--DGASHWLEGVQLLALYAIVVLAF 403
                 6676678888877776666.5555..4*****************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (409 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1059  (0.0590663); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.39
# Mc/sec: 3147.45
//
Query:       EPX70898.1  [L=313]
Description: mitotic spindle checkpoint protein Mad3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.6e-45  153.4   1.0    7.6e-45  151.9   1.3    1.6  2  Mad3_BUB1_I    Mad3/BUB1 homology region 1
    3.4e-06   27.2   2.0    7.2e-06   26.1   2.0    1.5  1  Mad3_BUB1_I_2  Putative Mad3/BUB1 like region 1 protein


Domain annotation for each model (and alignments):
>> Mad3_BUB1_I  Mad3/BUB1 homology region 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.9   1.3   8.4e-49   7.6e-45       2     123 ..      53     175 ..      52     176 .. 0.98
   2 ?   -3.4   0.0      0.98   8.8e+03      10      26 ..     289     306 ..     285     307 .. 0.67

  Alignments for each domain:
  == domain 1  score: 151.9 bits;  conditional E-value: 8.4e-49
                  HHHHHHHHHHTG....-THHHHHHHHHHHHHH-TT.-T.TT-HHHHHHHHHHHTTTSGGGTT-HHHHHHHHHHHTTSS-HHHHHHHHHHHTTSTTBHH CS
  Mad3_BUB1_I   2 erqefeeeleeaeegdDpLelwlryikwieesypq.sskesgllellerclkkfkdderYknDpRylklwlkyadlveepreifkflaskkiGtklal 98 
                  er +fee+l+ a++++DpL++w++yi+w+ +sypq +++esgll+llerc ++f +++ YknD Ryl++w++ya++ve+p+e+f+fl  ++iGt+++l
   EPX70898.1  53 ERISFEEKLQIADREEDPLQVWIDYIQWTLNSYPQgNTSESGLLSLLERCSQQFVKSPIYKNDIRYLRIWMQYAKYVEDPAELFSFLSLHEIGTNFSL 150
                  7889*******99999********************999*********************************************************** PP

                  HHHHHHHHHHHTT-HHHHHHHHHHH CS
  Mad3_BUB1_I  99 fYeewAellekkgrfkeAeevyelG 123
                  +Yee+A ++e++g +k+Ae+vy++G
   EPX70898.1 151 YYEEFAGYFESNGLYKKAEDVYQKG 175
                  ************************9 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 0.98
                  HHTG.....-THHHHHHH CS
  Mad3_BUB1_I  10 leea.eegdDpLelwlry 26 
                  l+++ +++ DpL+++  y
   EPX70898.1 289 LQTHsSRKVDPLNTFSVY 306
                  555544556999998766 PP

>> Mad3_BUB1_I_2  Putative Mad3/BUB1 like region 1 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   2.0   8.1e-10   7.2e-06       5      80 ..     107     183 ..     104     207 .. 0.89

  Alignments for each domain:
  == domain 1  score: 26.1 bits;  conditional E-value: 8.1e-10
  Mad3_BUB1_I_2   5 idipyfrnnpsyiekwkelYkktkd.lkilfLmklKkIskfyyfvYlelsryFlkkgkkeaalfiLqegiknkvydk 80 
                    +  p+++n+  y++ w ++ k+ +d +++   + l +I++  + +Y e++ yF   g  ++a+ + q+g   k+ + 
     EPX70898.1 107 VKSPIYKNDIRYLRIWMQYAKYVEDpAELFSFLSLHEIGTNFSLYYEEFAGYFESNGLYKKAEDVYQKGFLRKAKPF 183
                    678*******************99956777799************************************99888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (313 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       837  (0.0466841); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 2440.64
//
Query:       EPX70899.1  [L=408]
Description: SUA5/yciO/yrdC family protein Sua5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.8e-50  169.0   0.0    3.3e-49  166.8   0.0    1.9  2  Sua5_yciO_yrdC  Telomere recombination
    5.2e-32  111.2   0.0    9.2e-32  110.4   0.0    1.4  1  SUA5            Putative GTP-binding controlling metal-bindin


Domain annotation for each model (and alignments):
>> Sua5_yciO_yrdC  Telomere recombination
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.8   0.0   3.6e-53   3.3e-49       5     179 .]      54     246 ..      50     246 .. 0.91
   2 ?   -0.6   0.0     0.089     8e+02     124     158 ..     269     303 ..     267     317 .. 0.85

  Alignments for each domain:
  == domain 1  score: 166.8 bits;  conditional E-value: 3.6e-53
                     TTSEEEEE-SSSEEEEEETTSHHHHHHHHHHHTSHCCC--EEEESSCCCCCCCC-TC-...............-HHHHHHHHCT-SSSCEEEEE. CS
  Sua5_yciO_yrdC   5 kGgivaiptetvYgLacdatneeaverlreiKgrpsdkplavlvasledlkklaesev...............eeealkllerfwPGpitlllkr 84 
                     +++ va+ptetvYgL++da++ +a   +++ K+rp+d+pl+v++asl++l++l+++++               ++    l++rfwPGp+ +ll+ 
      EPX70899.1  54 TNEPVAFPTETVYGLGADARKTDAAYSIYRTKNRPADNPLIVHIASLDQLRRLISKSQplkskdigspnesliPQVYQPLIDRFWPGPLSILLPI 148
                     6799**************************************************9333356666666655555555555***************9 PP

                     .E-T...S-HHHHTTTTEEEEEE-SSHHHHHHHHHCTS-EEEEES-STTS-S-SSHHHHHHHC-TTSECB-SS---SSS---EEEETTSSTSSEC CS
  Sua5_yciO_yrdC  85 skek...lpkevapglktvGvrlPdtplarlLlealgeplvaTSanlsgepsitdaeeveeelgeivdlildggeiavgvdstVvdltegkpkil 176
                     ++++   +++ v+ ++ t++vr+P++p+a++L+   + pl+a+San+s++ps+t+a++v+++l++++ lildgg++ vg +stVv+ + ++p +l
      EPX70899.1 149 ENHEhppVSPIVTVNQPTFAVRMPQHPVALALIALSDVPLAAPSANASTRPSPTQAKHVYNDLQGKIPLILDGGPCGVGLESTVVNGLCDPPVVL 243
                     7776668999******************************************************************************89***** PP

                     EXX CS
  Sua5_yciO_yrdC 177 RrG 179
                     R+G
      EPX70899.1 244 RPG 246
                     *98 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.089
                     EES-STTS-S-SSHHHHHHHC-TTSECB-SS---S CS
  Sua5_yciO_yrdC 124 TSanlsgepsitdaeeveeelgeivdlildggeia 158
                     TS+n +++ ++ ++   +++ +  ++++l  g  +
      EPX70899.1 269 TSVNTEKNYIPQTPGMKYRHYSPTAKVMLFSGYKE 303
                     9*************************999988333 PP

>> SUA5  Putative GTP-binding controlling metal-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.4   0.0     1e-35   9.2e-32       1     134 []     248     399 ..     248     399 .. 0.84

  Alignments for each domain:
  == domain 1  score: 110.4 bits;  conditional E-value: 1e-35
                 .-HHHHHHHS......---...........-------------S-SSEEEEE--GGGHHHH.........HHHHHTTS-EEEEEEGGGTGG...TSEEE CS
        SUA5   1 itleeleevl......davek.......keekpraPGmkyrHYaPkapvvlveaeeeeeaake....ekleekkksgkkvgvlatseskea...assvl 79 
                 ++le+++++       + v+k       k+  p++PGmkyrHY+P+a+v+l+++ +e ea        k ++ +k+++++gvl+++++k+    + s+l
  EPX70899.1 248 VSLEQIQNCGgvwvntQ-VYKptsvnteKNYIPQTPGMKYRHYSPTAKVMLFSGYKECEAMDClydqLKKQNMDKDEARIGVLCSKKWKRGvfgEFSNL 345
                 789******84444331.333445555678888**********************999988779999899999999**************998844444 PP

                 EE...E-TT-HHHHHHHHHHHHHHHHHS--SEEEEE----STTHHHHHHHHHHHTT CS
        SUA5  80 sl.slgsrsdleeaarnLFaaLrelDeegvdlilvegvpeeglglAvmnRLrkAAg 134
                 +  +lg  ++ +e+++nLFa LrelD +gvd +lvegv+e+++glA+mnRL kAA+
  EPX70899.1 346 TFlDLG--EEGSEITKNLFAHLRELDLKGVDFVLVEGVAEDNEGLAIMNRLSKAAS 399
                 442356..999***************88***************************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (408 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       427  (0.0238162); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2906.41
//
Query:       EPX70900.1  [L=322]
Description: SNARE Ufe1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.7e-06   27.1   2.1    2.7e-05   24.4   0.0    2.9  3  Syntaxin-18_N  SNARE-complex protein Syntaxin-18 N-terminus
  ------ inclusion threshold ------
      0.032   12.3   0.4      0.049   11.7   0.4    1.2  1  Lant_dehydr_N  Lantibiotic dehydratase, N terminus
      0.044   13.6   3.5       0.08   12.8   0.6    2.2  2  MCPsignal      Methyl-accepting chemotaxis protein (MCP) sign
      0.067   13.7   0.7       0.14   12.7   0.7    1.5  1  Elf-1_N        Transcription factor protein N terminal
      0.083   12.5   2.0        1.2    8.7   0.4    2.1  2  DUF3289        Protein of unknown function (DUF3289)
      0.091   12.6   0.0       0.19   11.6   0.0    1.6  1  Csm4_C         CRISPR Csm4 C-terminal domain
       0.99    9.9   7.6       0.64   10.5   0.9    2.5  2  DUF16          Protein of unknown function DUF16
        3.4    7.9   8.8          2    8.6   0.3    2.9  3  Fib_alpha      Fibrinogen alpha/beta chain family


Domain annotation for each model (and alignments):
>> Syntaxin-18_N  SNARE-complex protein Syntaxin-18 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.0   1.2e-08   2.7e-05      28      73 ..      20      65 ..       2      78 .. 0.77
   2 ?    1.1   0.3      0.22   4.9e+02      37      63 ..      91     121 ..      65     126 .. 0.60
   3 ?   -1.6   0.1       1.5   3.3e+03       6      55 ..     233     283 ..     232     285 .. 0.53

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 1.2e-08
  Syntaxin-18_N 28 kkrkkkrlkkskekdeFikeAkeilkhItkLrkfLleirkaYlnvr 73
                   ++ + +++k s  +d F+ eA+ i + I  L +fL +ir aYl  r
     EPX70900.1 20 ENLSMRKPKLSNVRDGFLAEAYLIHNTIVHLCTFLEKIRGAYLKGR 65
                   3445567888999******************************864 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.22
  Syntaxin-18_N  37 kskekdeFikeAkeilk....hItkLrkfLl 63 
                    +  ++de  +eA +i++    +I++L+++ +
     EPX70900.1  91 NDLQRDEIDREASTIINscvqKINSLQNVVK 121
                    3445667777777776522226888888765 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 1.5
  Syntaxin-18_N   6 lFkasVktvka.sssskseekeakkrkkkrlkkskekdeFikeAkeilkhI 55 
                    +F  ++++v++  +s ++  + +++ ++  + +s++ ++  + A +++ +I
     EPX70900.1 233 EFEHTMQQVQEtGKSLTEIARLQTEISTHLSIQSTAAEKLYEDAMNVADSI 283
                    666777777533233333333444455555556666666677777776666 PP

>> Lant_dehydr_N  Lantibiotic dehydratase, N terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.4   2.2e-05     0.049     209     279 ..     231     302 ..     221     305 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 2.2e-05
  Lant_dehydr_N 209 lghllerLeeipeaaellaelaalrdllarydaapegaaeaaleearrrmralsaaarrllqvDlrld.eae 279
                    l++  +++++++e+ + l e+a+l+ +++++ + +++aae+++e+a++ ++++++ +r+l+++ +r++ +a+
     EPX70900.1 231 LQEFEHTMQQVQETGKSLTEIARLQTEISTHLSIQSTAAEKLYEDAMNVADSITGGNRQLIHAKSRNSrTAR 302
                    55555566777****************************************************999986665 PP

>> MCPsignal  Methyl-accepting chemotaxis protein (MCP) signalling domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.1      0.13     3e+02      89     155 ..     100     168 ..      83     183 .. 0.58
   2 ?   12.8   0.6   3.6e-05      0.08     114     166 ..     232     284 ..     221     289 .. 0.90

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.13
                 HHHHHHH..............HHHHHHHHHHHHHHH..HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   MCPsignal  89 keiealiieiqkeindsvesleetrqrveegselve..etgealkeiveavaevadlvqeiaaaseeqs 155
                 +e +++i   +++in+  +++++ ++++ + +   +  ++ e+l +  ++va+ ++++  ++   +e s
  EPX70900.1 100 REASTIINSCVQKINSLQNVVKDKQSQIPKRTGWLQglRSPEKLTKSETMVAHGSSILWYLQNELSEVS 168
                 455666666666666666666666666654443333113344444444444444444444444444444 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 3.6e-05
                 HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   MCPsignal 114 qrveegselveetgealkeiveavaevadlvqeiaaaseeqsasieevnqave 166
                 q+ e+++++v+etg++l ei+   +e+++ ++  ++a+e++ + + +v+++++
  EPX70900.1 232 QEFEHTMQQVQETGKSLTEIARLQTEISTHLSIQSTAAEKLYEDAMNVADSIT 284
                 78899**************************9999999999999999998876 PP

>> Elf-1_N  Transcription factor protein N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.7   6.1e-05      0.14      36     104 ..     203     271 ..     186     277 .. 0.64

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 6.1e-05
     Elf-1_N  36 veevPsadllqgysglelv.yddetdlm.qdrsldvaeeqei...etedvelaveasvhgsvecsdktieAaea 104
                 vee+P  ++ + +s  +lv  ++++dlm q+++ ++++ qe     te+  l++e s+h s      +  Aae 
  EPX70900.1 203 VEEIPDSEFQNYFSQEQLVlLEQDNDLMlQEFEHTMQQVQETgksLTEIARLQTEISTHLSI-----QSTAAEK 271
                 9************9876652455566653666666666666522255555556666666532.....3445555 PP

>> DUF3289  Protein of unknown function (DUF3289)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.1      0.02        45      95     161 ..      62     129 ..      42     145 .. 0.81
   2 ?    8.7   0.4   0.00054       1.2      26     110 ..     176     258 ..     155     303 .. 0.78

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.02
     DUF3289  95 flGkyreliaklidhmqynngapfsdllldkaykekilkdksek..ssllkikkilkenidlekevlpe 161
                 ++G+  + ++kl + + + + ++ s+l+l+   +++i +++s+   s ++ki++ l++ ++ +++++p+
  EPX70900.1  62 LKGRTVSNVHKLSKPLMESSLEELSKLELNDLQRDEIDREASTIinSCVQKINS-LQNVVKDKQSQIPK 129
                 5677777788888888888889999*************9999744388999976.77788888888775 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00054
     DUF3289  26 DlteeqlkekfklekvsakvdPytlkkltafsnsqtefakvykkeekiskeevaeiLFdelrelskafsflGkyreliaklidhm 110
                 Dl  ++ +e+ ++  +s+ + P +   + + + + +ef++++ +e+ +  e+  +++ +e+ ++ ++++ +Gk+ + ia+l +++
  EPX70900.1 176 DLRLRRAQERKTI--MSDILHPQKTGDMPVEEIPDSEFQNYFSQEQLVLLEQDNDLMLQEFEHTMQQVQETGKSLTEIARLQTEI 258
                 4444444444333..599999**9999999***************************************9999877776665444 PP

>> Csm4_C  CRISPR Csm4 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   8.6e-05      0.19       6      60 ..     103     156 ..      99     175 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 8.6e-05
      Csm4_C   6 ymlLSlllpkeeeledlleeaaYelikrsGfvssessaeqlkkkdvymfaeGSvf 60 
                  + +  +++k + l+++ ++++ ++ kr+G+++  +s e +  k+ +m+a+GS +
  EPX70900.1 103 STIINSCVQKINSLQNVVKDKQSQIPKRTGWLQGLRSPE-KLTKSETMVAHGSSI 156
                 56678899999***********************99999.666777899999976 PP

>> DUF16  Protein of unknown function DUF16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.8     0.086   1.9e+02      39      66 ..     102     129 ..      75     153 .. 0.68
   2 ?   10.5   0.9   0.00028      0.64      17      76 ..     212     271 ..     196     291 .. 0.82

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.086
                 HHHHHH...HHHHHHHHHHHHHHHHHHH CS
       DUF16  39 ieakvdklgeqinkleqkvekqgekike 66 
                   + +++  ++in l++ v+ ++ +i +
  EPX70900.1 102 ASTIINSCVQKINSLQNVVKDKQSQIPK 129
                 3344556666666666666666666654 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00028
                 TTB-BHHHHHHB-..BHHHHHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       DUF16  17 teYVTrkqlnefkdsnkqrLkkieakvdklgeqinkleqkvekqgekikelkveqkaqge 76 
                 ++Y  + ql    ++n+  L+++e+++++ +e  + l+++ + q+e  ++l+ +  a ++
  EPX70900.1 212 QNYFSQEQLVLLEQDNDLMLQEFEHTMQQVQETGKSLTEIARLQTEISTHLSIQSTAAEK 271
                 47888999999999****************************999988888887777665 PP

>> Fib_alpha  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.3   0.00088         2      87     119 ..      95     128 ..      37     131 .. 0.77
   2 ?   -0.8   0.0      0.69   1.6e+03      99     123 ..     152     176 ..     139     188 .. 0.61
   3 ?    2.7   0.9     0.057   1.3e+02      24      58 ..     228     262 ..     217     295 .. 0.58

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00088
                 HHCCCHHHHHHHCCH.HHHHHHHHHHHHHHHHHH CS
   Fib_alpha  87 eeeilrlketidaqe.snirvLqnvlesneqkiq 119
                 ++ei r   ti++ + ++i+ Lqnv+++++++i 
  EPX70900.1  95 RDEIDREASTIINSCvQKINSLQNVVKDKQSQIP 128
                 3456666678888888*************99985 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.69
                 CCHHHHHHHHHHHHHHHHHHHHHHH CS
   Fib_alpha  99 aqesnirvLqnvlesneqkiqkLeq 123
                 +  s + +Lqn l++ ++++ +L+ 
  EPX70900.1 152 HGSSILWYLQNELSEVSSSLYQLQD 176
                 3345556677777776666666654 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.057
                 HCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHH CS
   Fib_alpha  24 dlllkyekdvkkdlekleneleeisnstkeaeelv 58 
                 dl+l+  +++ +++++  ++l+ei++ ++e++++ 
  EPX70900.1 228 DLMLQEFEHTMQQVQETGKSLTEIARLQTEISTHL 262
                 44555555555555555555555555555554432 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1396  (0.0778627); expected 358.6 (0.02)
Passed bias filter:                      644  (0.0359195); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 2265.50
//
Query:       EPX70901.1  [L=1419]
Description: formin For3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.6e-55  187.0   0.0    5.6e-55  187.0   0.0    2.4  3  FH2             Formin Homology 2 Domain
    3.5e-18   65.9   4.2    3.5e-18   65.9   4.2    2.3  2  Drf_FH3         Diaphanous FH3 Domain
    1.1e-05   25.1   1.8    0.00011   21.8   0.1    3.0  2  Drf_GBD         Diaphanous GTPase-binding Domain
  ------ inclusion threshold ------
      0.041   14.1   0.4       0.14   12.4   0.4    1.9  1  Metal_resist    Heavy-metal resistance
      0.075   13.4   0.5        7.9    6.9   0.0    3.6  3  REV1_C          DNA repair protein REV1 C-terminal domain
        5.7    7.5  13.1          1    9.9   0.2    4.2  4  Porph_ging      Protein of unknown function (Porph_ging)
        7.9    5.5   9.6       0.25   10.4   1.7    2.4  3  DUF3086         Protein of unknown function (DUF3086)


Domain annotation for each model (and alignments):
>> FH2  Formin Homology 2 Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.1      0.97   2.5e+03     291     339 ..     547     589 ..     521     598 .. 0.53
   2 ?   -3.8   1.4       2.1   5.4e+03     289     309 ..     780     805 ..     769     818 .. 0.36
   3 !  187.0   0.0   2.2e-58   5.6e-55       3     371 ..     823    1209 ..     821    1210 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 0.97
                 HHHHHHHHHHHCCTTSSTT-THHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         FH2 291 glkklekelessekkeepsdkflevlkeflkeaeeklkkleeelkeake 339
                 ++++l  +l+ + +        ++ lk  l+e ++++++ e++l+++++
  EPX70901.1 547 QVDALLSQLNVGPR------DPMQFLKNQLNELRREIDQRERLLTSMQR 589
                 44444444444444......22334444444444444444444444444 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 2.1
                 HHHHHHHHHHHHHCCT.....TSSTT CS
         FH2 289 ekglkklekelessek.....keeps 309
                 e+  +k e+el+++e+      ee +
  EPX70901.1 780 EQITEKSEEELKEEEErarqqREEAE 805
                 33333333333333332221111111 PP

  == domain 3  score: 187.0 bits;  conditional E-value: 2.2e-58
                  XX---SS-B------EESSGGCTTSCCCCTCCHHHHC......TSHHHHHHHHTBSC--HCCH......HCSCCTTCCESSS-HHHHHHHHHHHHHH CS
         FH2    3 kkikpkkkLkplhWdkvkpsqdrstvWdklkeesfek......eldlseleelFsakekkkkkkksekskkskkkkkkvklLdpkrsqniaIlLkkl 93  
                  + ++pk++Lk++hW++v+p + ++ ++ k   + ++       ++ l+ l+e F+ +          ++k+++k+     lL+p+ +q ++I+L+++
  EPX70901.1  823 DYYEPKHQLKRVHWERVDPPSGHN-IFVKFPVDIETIgktlldSGWLQILDEKFDNTRRI-------ETKAVAKEASPDALLSPNVKQHLEIVLRSV 911 
                  6789******************97.***99988666577777788888888888777553.......3467777777889***************** PP

                  .TS-HHHHHHHHHTTTTCCCT..........HHHHHHHH.HHCGGHHHHHHH....HCTCTSGTTB-HHH.HHHHHHTT.STTHHHHHHHHHHHHTH CS
         FH2   94 .kltaeeiveaileldeeald..........lellenLl.kmaPtkeelkkl....keykgevseLseae.qFllelvk.iprlekRleallfkstf 172 
                   ++t+ee+v+++l  d + l            ++ e Ll  +a + ++++k        k++v +L++ e  F+l +v+ ++++++R+  l +++tf
  EPX70901.1  912 sEFTPEELVRMFL-TDPNFLPpaiqffhksgFATQEGLLaPFASYWTDYSKPedkrTPPKDDVRKLGYYErFFVLFIVNlRHYFQQRMYGLRLRETF 1007
                  *************.89999999*********8888888889***999999995443345666********999999********************* PP

                  HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHSTCSTTCS-SEE-GGGGGGCCCSB-STTTSBHHHHHHHHHHTTSGGGGGHHHHTTT CS
         FH2  173 eeeveelkrslealeaaseeLknskkfkklLeliLalGNymNdgtrrgqAkGFkLssLlkLsdvKstdnkttLLHylvkiireklpevldfsseLkn 269 
                    e+e+++  ++++ ++++++ ++k f+ +++++L+lGNy Nd    ++A +F+L + ++L+++++   + tLLHy+++iir+++pe ++ + ++k+
  EPX70901.1 1008 IPEIENIEVHVKKVIDVCKSVLEDKYFSGFFQVLLNLGNYINDPL--DKARAFSLPMVYRLETLRDCTFSNTLLHYFEDIIRTQFPEYEKSEATFKK 1102
                  *******************************************88..9************************************************* PP

                  HHHCCTS-HHHHHHHHHHHHHHHHHHHHHHHHCCT....TSSTT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TT.CCHHHHHH CS
         FH2  270 vkkaakvnleslekevkklekglkklekelessek....keepsdkflevlkeflkeaeeklkkleeelkeakelvkelveYfgedkk.evspeeff 361 
                  ++++ ++ ++ l++e++  +++  +++ e+e+++     +++p+dk+++++ e+ ++a+ek+k++ +++++ ++l +++v+Y++e k+ ev ++ f 
  EPX70901.1 1103 IQSICSYGIDGLVSEMDSAYEQYLHFKNEIEKGALskreEHHPEDKVVDAIYEWYDKASEKIKSFMALKRDFLKLTEDTVKYLCEFKNvEVVRNTFL 1199
                  **********************************99999********************************************999999******** PP

                  HHHHHHHHHH CS
         FH2  362 kilreFlkef 371 
                  k+l +F+ ++
  EPX70901.1 1200 KNLTSFYIIY 1209
                  ******9887 PP

>> Drf_FH3  Diaphanous FH3 Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.9   4.2   1.4e-21   3.5e-18       2     175 ..     279     481 ..     278     493 .. 0.92
   2 ?   -2.8   0.5       1.5   3.9e+03      84     148 ..     540     609 ..     525     617 .. 0.68

  Alignments for each domain:
  == domain 1  score: 65.9 bits;  conditional E-value: 1.4e-21
                 HHHHHHHHHHHHHHCCT-SSTTHHHHHHHHH........................HSS-HHHHHHHHHHHHHHHHSSSSHHHHHHHHHHHHCTTHHHHH CS
     Drf_FH3   2 ghekvleatldfkevaeergrfrslvgaldel.......................enelveykvatmllInalvnspedlqfRlhLRseflalGLdkii 77 
                 gh+ v++a+  ++e  + ++rf++ ++al ++                       +++l++y+v t  lI+ ++++  dlq R+ +R efl++GL k +
  EPX70901.1 279 GHLFVIKALEWLVEQGASKTRFSKWMSALHDVvsgiqshadnlilpnnelanlqdTDCLIDYLVVTFNLIRGICSCTVDLQSRCNIRREFLNAGLGKTL 377
                 8999*********************************************************************************************** PP

                 HHHCTSCSHHHHHHHHHHHHHHHHHHHHHH.....HHHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXX..XXXXXXXXXXXXXXXXXXX CS
     Drf_FH3  78 dklreleneeLddqlqafeeerneDeeell.....eraedktvdlddpeelfellknkvkdteaepyl.lsilqhlllirddeeekesylklleelvsq 170
                 + ++ ++n  +++ + + ++e+n D+++ +     ++a++++ d  + +++     + + + + +++  l+++q++  +  d++++ s+++ll +l ++
  EPX70901.1 378 EIMQRWKNISVRTVVVNLLNEHNGDAQTYKkymvlNSANMEKSDVASLKSTNVATDRHMNEEDPQQVQmLNAFQKICSRLIDHDSQSSFYNLLQSLSNE 476
                 ****************************99777778888999999999999999977777666555544*************************99988 PP

                 XXXXX CS
     Drf_FH3 171 ivlqr 175
                  +l +
  EPX70901.1 477 KDLEK 481
                 77765 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.5
                 CSHHHHHHHHHHHHHHH...HHHHHHH.HHHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXX CS
     Drf_FH3  84 eneeLddqlqafeeern...eDeeell.eraedktvdlddpeelfellknkvkdteaepyl.lsilqhll 148
                 en+ L dq++a +++ n   +D  ++l +++++ + ++d+ e+l++++++++++    +++ +s lq  l
  EPX70901.1 540 ENKRLHDQVDALLSQLNvgpRDPMQFLkNQLNELRREIDQRERLLTSMQREFDGRYKAQLFaYSKLQSQL 609
                 6666777766666655522244444431445577888888888888888888888888888888888776 PP

>> Drf_GBD  Diaphanous GTPase-binding Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.1   4.5e-08   0.00011      70     187 ..     149     272 ..     145     273 .. 0.85
   2 ?    0.7   0.3      0.13   3.3e+02      25      81 ..    1218    1274 ..    1189    1286 .. 0.75

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 4.5e-08
     Drf_GBD  70 esyvkklkddslkekqlesLrVaLrtqplsWvkrFieleGlvaLlnvLskinekkaeeeedlkkeyeiikClKalmNnkvGlda.vlahk......svi 161
                  +y++k+ + + + + l  L+ +L+ qp+ W+ +F e +G+  Ll  L+++ +  ++     + e+ +i++l   +N+ v +++ +l+ k      ++i
  EPX70901.1 149 DYYIEKIVEVPTNVEHLVALNLQLQMQPIWWIDEFSERNGVESLLTSLRNLGHIPQRH-AYTDVEVLLIQSLFHSLNSGVARNRlYLSAKcavpgfNAI 246
                 58**********************************************9998887777.7889999999999999999888876245543222222678 PP

     Drf_GBD 162 kllaqsldserlktrklvlelLtalc 187
                  +la+s+ s+ l+ r   + +L+ +c
  EPX70901.1 247 GALAESMFSKSLNARRISTFILKIIC 272
                 89999999999999999999999999 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.13
     Drf_GBD   25 ekr.eallalpiekKwqlvvqdkkkkakkeeklsksksksneeespesyvkklkddsl 81  
                   kr ++  a  +e+ ++l++  kk++   + +++++  + +++ s +++++++ + ++
  EPX70901.1 1218 RKReREAQARRTEESKKLIMERKKTSIVAQ-YRKEIPDETSRSPSNQDLITDIGSSKV 1274
                  333345567778888999999999998888.899999999999999999988876655 PP

>> Metal_resist  Heavy-metal resistance
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.4   5.3e-05      0.14      17      74 ..     747     813 ..     743     817 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 5.3e-05
                   XXXXXXXXXXTTHHBH..........HHHHHHHS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Metal_resist  17 alrgpggpppggparg.........raellraalgLpaeqraelraalrdharelralrrelraarr 74 
                    l+gp++ppp +p+ +          ++ l+a ++++++ ++el++ +  ++++++++++++r+a +
    EPX70901.1 747 GLQGPPPPPPPPPGVTpggrfvtstLQPTLTATEQITEKSEEELKEEEERARQQREEAEKRAREAVE 813
                   45666666666666667889*****9************************************99865 PP

>> REV1_C  DNA repair protein REV1 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1       1.8   4.5e+03      18      54 ..     128     166 ..     124     181 .. 0.61
   2 ?    6.9   0.0    0.0031       7.9      46      88 ..     283     322 ..     259     325 .. 0.80
   3 ?    1.9   0.0      0.12   3.1e+02      30      57 ..     469     496 ..     458     509 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 1.8
      REV1_C  18 PneeDvealakyLkkvv..eeerdlekavavlkwlrvll 54 
                 P  +Dv++l + +  v+  + +  +ek+v+v   +++l+
  EPX70901.1 128 PLTKDVTVLDEDMYVVIlgRIDYYIEKIVEVPTNVEHLV 166
                 666777777665555554455566666666544444444 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0031
      REV1_C  46 vlkwlrvlleeeeeskeeeageaWekafrevkeavqeavrkrg 88 
                 v+k l++l+e+    ++++  ++W  a+++v + +q  + + +
  EPX70901.1 283 VIKALEWLVEQG---ASKTRFSKWMSALHDVVSGIQSHADNLI 322
                 789********9...899999***************9887665 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.12
      REV1_C  30 Lkkvveeerdlekavavlkwlrvlleee 57 
                 L + +++e+dlek+++ + +l + l+  
  EPX70901.1 469 LLQSLSNEKDLEKIEKSMHLLVFTLNAI 496
                 4455569************999888766 PP

>> Porph_ging  Protein of unknown function (Porph_ging)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.19   4.9e+02       3      35 ..      60      92 ..      59     124 .. 0.77
   2 ?   -2.0   0.1       2.2   5.6e+03       9      46 ..     405     442 ..     400     468 .. 0.68
   3 ?    0.9   1.9      0.27     7e+02      21      56 ..     782     817 ..     773     825 .. 0.59
   4 ?    9.9   0.2    0.0004         1      28      67 ..    1215    1254 ..    1203    1262 .. 0.78

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.19
  Porph_ging  3 ltketkqIgqYtcfkAtavkeveetdfsnlrrr 35
                l++e+ +  qY+c++ ++ ++++  d   ++ +
  EPX70901.1 60 LGHESDNSLQYMCYRTVYHHKIKVFDRLYVEAT 92
                678899999*******99998877665555544 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 2.2
  Porph_ging   9 qIgqYtcfkAtavkeveetdfsnlrrrerreeekkeke 46 
                 +  +Y++     +++ +  ++++++ +++r+ ++++ +
  EPX70901.1 405 TYKKYMVLNSANMEKSDVASLKSTNVATDRHMNEEDPQ 442
                 55678888888888777777776666555555544433 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.27
  Porph_ging  21 vkeveetdfsnlrrrerreeekkekeeeeeepkeve 56 
                 ++e +e+++++ ++r+r+++e+ ek+ +e ++k ++
  EPX70901.1 782 ITEKSEEELKEEEERARQQREEAEKRAREAVEKYTK 817
                 344455555555555555566666666666666555 PP

  == domain 4  score: 9.9 bits;  conditional E-value: 0.0004
  Porph_ging   28 dfsnlrrrerreeekkekeeeeeepkevevtAWytpqiPv 67  
                  d ++ r+re++ ++++e+++ ++e k+++++A y ++iP 
  EPX70901.1 1215 DNARKREREAQARRTEESKKLIMERKKTSIVAQYRKEIPD 1254
                  444555666667777778899******************5 PP

>> DUF3086  Protein of unknown function (DUF3086)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.35   8.9e+02     151     185 ..     369     403 ..     355     416 .. 0.80
   2 ?   -4.4   0.3       3.1     8e+03       8      39 ..     566     593 ..     563     597 .. 0.54
   3 ?   10.4   1.7   9.9e-05      0.25      84     136 ..     779     834 ..     766     850 .. 0.78

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.35
     DUF3086 151 tqggrGalrslgsrlqnilvasaiisilrelygdr 185
                  ++g G    +  r +ni v + ++ +l+e  gd 
  EPX70901.1 369 LNAGLGKTLEIMQRWKNISVRTVVVNLLNEHNGDA 403
                 4567788888889****************998885 PP

  == domain 2  score: -4.4 bits;  conditional E-value: 3.1
     DUF3086   8 leerkqalqieveqLerrkeriekelrtsfaG 39 
                 l+++ ++l+ e++q    +er+ + ++++f G
  EPX70901.1 566 LKNQLNELRREIDQ----RERLLTSMQREFDG 593
                 44444555555554....55666666666665 PP

  == domain 3  score: 10.4 bits;  conditional E-value: 9.9e-05
     DUF3086  84 dekeeeekeeeeeaepqfaeqefkeeakkirklldqyrekP...dyygppWqlrrt 136
                 +e+ +e++eee ++e++ a+q+ +e +k+ r+++++y + P   dyy p  ql+r 
  EPX70901.1 779 TEQITEKSEEELKEEEERARQQREEAEKRAREAVEKYTKIPsfrDYYEPKHQLKRV 834
                 34445566666677777999999****************9978889*******995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1419 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1616  (0.0901333); expected 358.6 (0.02)
Passed bias filter:                      528  (0.0294495); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 1.00u 0.32s 00:00:01.32 Elapsed: 00:00:00.49
# Mc/sec: 8683.75
//
Query:       EPX70902.1  [L=758]
Description: elongator complex subunit Elp2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.9e-33  113.9  17.8    0.00018   22.3   0.0   10.6 12  WD40         WD domain, G-beta repeat
    2.6e-08   34.0   4.2       0.63   10.4   0.0    7.0  7  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    5.9e-05   22.2   0.0       0.23   10.4   0.0    3.2  2  Ge1_WD40     WD40 region of Ge1, enhancer of mRNA-decapping p
  ------ inclusion threshold ------
      0.018   14.4   1.5        5.5    6.2   0.1    3.3  4  WD40_like    WD40-like domain
       0.11   12.6   1.5         16    5.6   0.1    4.4  5  BBS2_Mid     Ciliary BBSome complex subunit 2, middle region


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   4.9e-08   0.00018       8      37 ..      48      79 ..      41      80 .. 0.86
   2 ?   -2.1   0.0       2.4   8.4e+03      21      34 ..     106     119 ..     102     125 .. 0.61
   3 ?   -3.2   0.0         5   1.8e+04      21      36 ..     154     169 ..     152     170 .. 0.70
   4 !   18.5   0.0   7.4e-07    0.0027       4      38 .]     182     220 ..     179     220 .. 0.85
   5 !   15.2   0.1   8.2e-06     0.029       9      37 ..     264     293 ..     256     294 .. 0.89
   6 ?   -2.0   1.2       2.2   7.9e+03      18      37 ..     332     351 ..     312     352 .. 0.71
   7 !   18.5   0.0   7.8e-07    0.0028       3      37 ..     360     395 ..     358     395 .. 0.90
   8 !    7.7   0.0     0.002       7.1       8      30 ..     526     549 ..     520     562 .. 0.80
   9 !   20.3   0.1     2e-07   0.00071       1      36 [.     566     602 ..     566     604 .. 0.89
  10 !    9.5   0.0   0.00054       1.9       7      37 ..     618     651 ..     614     652 .. 0.79
  11 ?    2.7   0.0     0.073   2.6e+02      13      38 .]     671     700 ..     663     700 .. 0.81
  12 ?   -0.3   0.0      0.64   2.3e+03      23      36 ..     738     752 ..     719     752 .. 0.64

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 4.9e-08
                ESS.SSEEEEE.EETTSSEEEEEETTSEEEEE CS
        WD40  8 tGH.ssvtsla.fspdgawlasGsdDgtvriW 37
                 GH + ++++  f  ++++++sGs D+t+r+W
  EPX70902.1 48 AGHtDRINCIEeFTTEKTLIISGSSDKTIRLW 79
                59*666*****************99******* PP

  == domain 2  score: -2.1 bits;  conditional E-value: 2.4
                 TSSEEEEEETTSEE CS
        WD40  21 dgawlasGsdDgtv 34 
                 +g+++++G+ +  +
  EPX70902.1 106 NGDLIIAGCSNSEC 119
                 89999999533333 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 5
                 TSSEEEEEETTSEEEE CS
        WD40  21 dgawlasGsdDgtvri 36 
                 dg  l+ G+ ++ + +
  EPX70902.1 154 DGIVLVVGGSNKRINV 169
                 6777777866988877 PP

  == domain 4  score: 18.5 bits;  conditional E-value: 7.4e-07
                 EEEEESS.SSEEEEE...EETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGH.ssvtsla...fspdgawlasGsdDgtvriWd 38 
                   +ltGH ++v++la   +s + a ++sGs D+  r+W+
  EPX70902.1 182 KAVLTGHlDWVRCLAvrqTSESMATMVSGSQDRYMRLWK 220
                 5689****99*****8777777777899**********6 PP

  == domain 5  score: 15.2 bits;  conditional E-value: 8.2e-06
                 SS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   9 GH.ssvtslafspdgawlasGsdDgtvriW 37 
                 GH +++  ++++p    ++s+s D ++++W
  EPX70902.1 264 GHeDWIMNVQWHPTEEIILSSSSDSSLMVW 293
                 9*888************998877******* PP

  == domain 6  score: -2.0 bits;  conditional E-value: 2.2
                 EETTSSEEEEE.ETTSEEEEE CS
        WD40  18 fspdgawlasG.sdDgtvriW 37 
                 +spdg+ +a + ++ g  r+W
  EPX70902.1 332 WSPDGNAVA-CwGRTGGWRLW 351
                 99**99986.55555555555 PP

  == domain 7  score: 18.5 bits;  conditional E-value: 7.8e-07
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 +l + +GH ++v s+a++p g+++++ s D+t r++
  EPX70902.1 360 QLPSVSGHtKPVKSVAWDPQGQFFFTVSLDQTTRLY 395
                 667889**999**************9999***9986 PP

  == domain 8  score: 7.7 bits;  conditional E-value: 0.002
                 ESSSS.EEEEEEETTSSEEEEEET CS
        WD40   8 tGHss.vtslafspdgawlasGsd 30 
                  GH+  v+++++s+ g+++a++++
  EPX70902.1 526 YGHGYeVYACDVSHKGDYIATSCK 549
                 49*446**************9873 PP

  == domain 9  score: 20.3 bits;  conditional E-value: 2e-07
                 TEEEEEEESSSS..EEEEEEETTSSEEEEEETTSEEEE CS
        WD40   1 gqclrtltGHss..vtslafspdgawlasGsdDgtvri 36 
                 +++++ l+GH s  vt ++fs+d ++l+s+++D+ v i
  EPX70902.1 566 WKQQQMLSGH-SltVTTIKFSHDDKYLLSAGRDRLVCI 602
                 578999****.446********************9987 PP

  == domain 10  score: 9.5 bits;  conditional E-value: 0.00054
                 EESSSS.EEEEEEETTSSE........EEEEETTSEEEEE CS
        WD40   7 ltGHss.vtslafspdgaw........lasGsdDgtvriW 37 
                 +++Hs  +++       aw        +a++s+D+ v++W
  EPX70902.1 618 IKAHSRiIWDA------AWapkemgylFATASRDKMVKLW 651
                 57896656999......7777777787899********** PP

  == domain 11  score: 2.7 bits;  conditional E-value: 0.073
                 EEEEE....EETTSSEEEEEETTSEEEEEE CS
        WD40  13 vtsla....fspdgawlasGsdDgtvriWd 38 
                 vt+l+    f++d+ ++a G++ g+ ++W+
  EPX70902.1 671 VTALDiapfFHDDHLLMAVGTESGKTYVWK 700
                 8999999*7777777778999999999995 PP

  == domain 12  score: -0.3 bits;  conditional E-value: 0.64
                 SE..EEEEETTSEEEE CS
        WD40  23 aw..lasGsdDgtvri 36 
                 ++  l++G  D ++r+
  EPX70902.1 738 SYslLLAGE-DTSIRM 752
                 335478777.***995 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       3.8   1.4e+04      48      66 ..      62      80 ..      51      86 .. 0.71
   2 ?    2.9   0.1     0.037   1.3e+02      48      77 ..     153     182 ..     108     196 .. 0.86
   3 ?    3.1   0.0     0.034   1.2e+02      27      64 ..     255     292 ..     245     305 .. 0.81
   4 !   10.4   0.0   0.00018      0.63      32      70 ..     353     400 ..     332     418 .. 0.82
   5 !    8.5   0.0    0.0007       2.5      18      67 ..     554     605 ..     537     626 .. 0.78
   6 ?    0.0   0.0       0.3   1.1e+03      49      76 ..     635     662 ..     618     677 .. 0.65
   7 ?    1.5   0.0      0.11   3.8e+02       9      48 ..     686     731 ..     679     756 .. 0.66

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 3.8
  ANAPC4_WD40 48 pdgklLavaysdgevrlld 66
                  + +l+  + sd ++rl +
   EPX70902.1 62 TEKTLIISGSSDKTIRLWE 80
                 4556777788888888876 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.037
  ANAPC4_WD40  48 pdgklLavaysdgevrlldaesgkvvhsls 77 
                  +dg +L+v+ s+ +++++ + s+ +  +l+
   EPX70902.1 153 KDGIVLVVGGSNKRINVYGSDSTSIHFELK 182
                  4899***************99998877665 PP

  == domain 3  score: 3.1 bits;  conditional E-value: 0.034
  ANAPC4_WD40  27 qrvwtleedkedsevrsLaWkpdgklLavaysdgevrl 64 
                  + v+++   +++  + +++W+p ++++  + sd+++ +
   EPX70902.1 255 KIVFDALLMGHEDWIMNVQWHPTEEIILSSSSDSSLMV 292
                  6677776677888899***************9998765 PP

  == domain 4  score: 10.4 bits;  conditional E-value: 0.00018
  ANAPC4_WD40  32 l.........eedkedsevrsLaWkpdgklLavaysdgevrlldaesg 70 
                            + +++ + v+s+aW p+g+++  +  d + rl+ ++++
   EPX70902.1 353 KsgsgweqlpSVSGHTKPVKSVAWDPQGQFFFTVSLDQTTRLYASYEQ 400
                  44444444555578999*************************999875 PP

  == domain 5  score: 8.5 bits;  conditional E-value: 0.0007
  ANAPC4_WD40  18 ellvfRlngqrvwtl..eedkedsevrsLaWkpdgklLavaysdgevrllda 67 
                  e ++ Rl   +vw+     ++++ +v+ +++++d+k L  a  d  v +++ 
   EPX70902.1 554 EHAIIRLYDTNVWKQqqMLSGHSLTVTTIKFSHDDKYLLSAGRDRLVCIHQF 605
                  5678999999***995545688899****************99988777654 PP

  == domain 6  score: 0.0 bits;  conditional E-value: 0.3
  ANAPC4_WD40  49 dgklLavaysdgevrlldaesgkvvhsl 76 
                   g l+a a  d  v+l ++ + k ++ +
   EPX70902.1 635 MGYLFATASRDKMVKLWQVLDDKKIKDV 662
                  4667777777777777777666655544 PP

  == domain 7  score: 1.5 bits;  conditional E-value: 0.11
  ANAPC4_WD40   9 LiAlatedgellvfRlngqrvwtl......eedkedsevrsLaWkp 48 
                  L+A++te+g+ +v       + +       ++ +++++++++aW+p
   EPX70902.1 686 LMAVGTESGKTYVWKCPKDDLTKWtplrlpDTMSPKESINKIAWRP 731
                  6777777777777777666666656677777788899999999997 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.0    0.0002      0.72      26     101 ..     536     611 ..     521     614 .. 0.79
   2 !   10.4   0.0   6.5e-05      0.23     176     218 ..     610     655 ..     604     690 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0002
    Ge1_WD40  26 avhregkylayaikvkntgeglvrvvnket.eeraLlkglkgevldlafahvsskillavdekgslfvykveevesk 101
                  v+++g y+a + k+++  ++++r+ ++++ +++ +l g + +v+ ++f+h ++   l+      + +++ ++vesk
  EPX70902.1 536 DVSHKGDYIATSCKSQSPEHAIIRLYDTNVwKQQQMLSGHSLTVTTIKFSHDDKYL-LSAGRDRLVCIHQFSDVESK 611
                 57889************99*******988647889****************77655.55555566777777777665 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 6.5e-05
    Ge1_WD40 176 eieegllkieehs.liveaafspd..GtalatasedGevkffqvyl 218
                 +++  ++ i+ hs  i +aa++p   G   atas d +vk++qv  
  EPX70902.1 610 SKYIPYVVIKAHSrIIWDAAWAPKemGYLFATASRDKMVKLWQVLD 655
                 44557899****97899*****9655899**************964 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.1    0.0036        13     188     220 ..      89     121 ..      14     133 .. 0.70
   2 ?   -1.7   0.0      0.41   1.5e+03     201     233 ..     149     182 ..     142     192 .. 0.61
   3 ?    6.2   0.1    0.0015       5.5       2      59 ..     531     593 ..     530     613 .. 0.80
   4 ?   -1.6   0.0      0.38   1.4e+03      94     108 ..     686     700 ..     669     707 .. 0.79

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.0036
   WD40_like 188 vilqkidvegkPecillvddylivGgsfkylll 220
                 +i+q i+++++Pe + +  d++i G+s +  ++
  EPX70902.1  89 IIIQTINLDATPESLNINGDLIIAGCSNSECVV 121
                 599***********************9876655 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.41
   WD40_like 201 cillvddy.livGgsfkyllliNiklnvntfklr 233
                 +i + d++ l+vGgs k + +   ++ + +f+l+
  EPX70902.1 149 TIKFKDGIvLVVGGSNKRINVYGSDSTSIHFELK 182
                 4444444414566666666666666666666655 PP

  == domain 3  score: 6.2 bits;  conditional E-value: 0.0015
   WD40_like   2 eiYsidiskkgslilyGgkddk.....ctvlkleslesvsivesfedSvifvklldddlilvv 59 
                 e+Y+ d+s+kg++i+   k++      +++++++  ++ +++ + +  v  +k+ +dd++l  
  EPX70902.1 531 EVYACDVSHKGDYIATSCKSQSpehaiIRLYDTNVWKQQQMLSGHSLTVTTIKFSHDDKYLLS 593
                 9****************9998644444678888888888999999999999999999987754 PP

  == domain 4  score: -1.6 bits;  conditional E-value: 0.38
   WD40_like  94 klliGtnkGsiyvfs 108
                  +++Gt+ G+ yv++
  EPX70902.1 686 LMAVGTESGKTYVWK 700
                 4689********986 PP

>> BBS2_Mid  Ciliary BBSome complex subunit 2, middle region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.1    0.0044        16       3      35 ..      56      87 ..      55     116 .. 0.83
   2 ?   -0.6   0.0      0.36   1.3e+03      13      36 ..     156     179 ..     144     187 .. 0.75
   3 ?   -2.4   0.0       1.4   4.9e+03       9      28 ..     201     220 ..     194     236 .. 0.73
   4 ?   -0.9   0.1      0.47   1.7e+03      67      84 ..     646     663 ..     579     698 .. 0.69
   5 ?    1.3   0.0     0.099   3.5e+02       7      28 ..     733     754 ..     732     757 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0044
    BBS2_Mid  3 aladvdgdgeneLvvgsddfeirvfkeeelvae 35
                ++ +++++ ++ ++ gs d +ir+++++e    
  EPX70902.1 56 CIEEFTTE-KTLIISGSSDKTIRLWEKDEENDS 87
                56677776.777888***********9986555 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.36
    BBS2_Mid  13 neLvvgsddfeirvfkeeelvaei 36 
                   Lvvg  + +i v+  ++    +
  EPX70902.1 156 IVLVVGGSNKRINVYGSDSTSIHF 179
                 5699**********9998765544 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 1.4
    BBS2_Mid   9 gdgeneLvvgsddfeirvfk 28 
                  + ++ +v gs+d  +r++k
  EPX70902.1 201 SESMATMVSGSQDRYMRLWK 220
                 45567888899999888876 PP

  == domain 4  score: -0.9 bits;  conditional E-value: 0.47
    BBS2_Mid  67 kkerlWrvksknevvala 84 
                 k+ +lW+v  ++++  + 
  EPX70902.1 646 KMVKLWQVLDDKKIKDVV 663
                 556666665555432222 PP

  == domain 5  score: 1.3 bits;  conditional E-value: 0.099
    BBS2_Mid   7 vdgdgeneLvvgsddfeirvfk 28 
                 +d++g+ +L+ + +d +ir+++
  EPX70902.1 733 YDKKGSYSLLLAGEDTSIRMLR 754
                 589999*************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (758 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       472  (0.0263261); expected 358.6 (0.02)
Passed bias filter:                      415  (0.0231469); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.70u 0.31s 00:00:01.01 Elapsed: 00:00:00.48
# Mc/sec: 4734.63
//
Query:       EPX70903.1  [L=811]
Description: TOG Alp14 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.5e-07   28.7   1.4       0.12   12.7   0.0    4.7  4  HEAT            HEAT repeat
    1.4e-06   28.0   0.9    3.3e-06   26.8   0.9    1.6  1  CLASP_N         CLASP N terminal
    0.00023   21.5   0.1       0.51   10.8   0.1    3.9  3  HEAT_2          HEAT repeats
     0.0006   20.0   0.2     0.0015   18.7   0.2    1.6  1  TAN             Telomere-length maintenance and DNA damage re
     0.0026   17.8   1.2      0.075   13.1   0.8    2.5  2  Cnd1            non-SMC mitotic condensation complex subunit 
  ------ inclusion threshold ------
       0.07   13.2   0.6       0.29   11.3   0.6    2.1  1  NYD-SP28_assoc  Sperm tail C-terminal domain
       0.15   11.8   0.0          4    7.1   0.0    2.4  2  ox_reductase_C  Putative oxidoreductase C terminal domain
        1.6    9.7   6.5        0.2   12.5   0.7    2.7  3  PRKG1_interact  cGMP-dependent protein kinase interacting dom
        1.7    9.5   6.4          1   10.2   3.3    2.3  2  FliT            Flagellar protein FliT
          7    7.2  12.9        8.6    6.9   3.2    3.2  3  ZapB            Cell division protein ZapB


Domain annotation for each model (and alignments):
>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0       1.7     3e+03       2      29 ..     132     159 ..     131     161 .. 0.79
   2 !   10.1   0.1   0.00045      0.81       4      31 .]     330     358 ..     327     358 .. 0.84
   3 ?   -0.0   0.0      0.83   1.5e+03       5      26 ..     408     429 ..     406     433 .. 0.83
   4 !   12.7   0.0   6.8e-05      0.12       8      29 ..     453     474 ..     449     476 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 1.7
                 HHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgalae 29 
                 + +ll  ls  sp+V  a + a+++l+e
  EPX70903.1 132 IEPLLPSLSARSPKVITANVSAIADLIE 159
                 67899999999**998887777777776 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00045
                 HHHHHH.T-SSHHHHHHHHHHHHHHHHCS CS
        HEAT   4 lllkll.sDpspeVReaAakaLgalaevl 31 
                 ll k + +D +  V ++Aa++++ala++l
  EPX70903.1 330 LLSKSIiKDANIMVVMNAANCITALAKGL 358
                 56666559******************985 PP

  == domain 3  score: -0.0 bits;  conditional E-value: 0.83
                 HHHHHT-SSHHHHHHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAakaLga 26 
                 ++   + ++p++  a+++ L++
  EPX70903.1 408 ICAFSNNKNPQIKIACFNLLTR 429
                 6777799*********999976 PP

  == domain 4  score: 12.7 bits;  conditional E-value: 6.8e-05
                 HHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   8 llsDpspeVReaAakaLgalae 29 
                   sD+   VR++Aa+aLg+l++
  EPX70903.1 453 GVSDTFEPVRSSAAEALGTLMK 474
                 569999**************98 PP

>> CLASP_N  CLASP N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.9   1.8e-09   3.3e-06      17     218 ..     296     488 ..     284     496 .. 0.85

  Alignments for each domain:
  == domain 1  score: 26.8 bits;  conditional E-value: 1.8e-09
     CLASP_N  17 telnwdaReknilklrslikgn.vpedaveelleclkqlleailkalssLrttlsstgchllkelaiqlkeqldpmveillptLlkllgdtKkiisqna 114
                 + + w+ R++++  l   +++  +++d + +l+++l    + i+k ++ +   +++++   +  la+ l  +  +++   ++ Ll++   +K+ + ++ 
  EPX70903.1 296 SSTKWKERKEALDALVPVLSQPkIKDDDFFSLVALLS---KSIIKDANIM---VVMNAANCITALAKGLRLNYSKYAITSVQALLERSKEKKQNVVETL 388
                 6678999999999999999998666666666666666...8888888865...7999****************************************** PP

     CLASP_N 115 nqalaallsnasfsprilqvlsvalqdKnvqpReysaiwLkilltrfeshkskleasllldliekslkkgleDanptVRetaRstfweffkvwPsrAks 213
                 + a++a++  ++   ++   + + +++Kn+q+++ + ++L+  +++     ++ ++s+ ++l+ ks + g++D    VR++a +++ +++k + +r+ +
  EPX70903.1 389 SSAMDAVCDTIP-FDDVSEPICAFSNNKNPQIKIACFNLLTRCFRKVL---HHPSKSS-IELCSKSCVPGVSDTFEPVRSSAAEALGTLMKLVGERQLA 482
                 ************.7899999999************************9...3333333.6889********************9999999998888777 PP

     CLASP_N 214 ll.ssl 218
                 +  +sl
  EPX70903.1 483 VHmESL 488
                 664444 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0      0.16   2.8e+02       2      53 ..     133     192 ..     104     209 .. 0.74
   2 !   10.8   0.1   0.00029      0.51       3      75 ..     289     381 ..     287     392 .. 0.71
   3 ?    3.7   0.0     0.046        82      40      57 ..     454     471 ..     435     492 .. 0.73

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.16
      HEAT_2   2 daLlqalendpdpevrraairaLg....rignp.....ealpaLvellededpavRraaae 53 
                 ++Ll  l +  +p+v  a + a++    ++g++      ++  L +l  ++d +vR++  +
  EPX70903.1 133 EPLLPSL-SARSPKVITANVSAIAdlieQFGTKiippkPIVGQLKSLFGHADKNVRHETFR 192
                 6777777.77778877777777775555333334444355888888888888888887665 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00029
      HEAT_2   3 aLlqalendpdpevrraairaLg......rignp...ealpaLvell.ededpavRraaaeaLgaig..........dpealpaLkelldddd 75 
                   l+ + ++  ++ r++a++aL       +i+++   +++++L + + +d++ +v ++aa+ + a++             +++aL+e+ ++++
  EPX70903.1 289 SNLETVMSSTKWKERKEALDALVpvlsqpKIKDDdffSLVALLSKSIiKDANIMVVMNAANCITALAkglrlnyskyAITSVQALLERSKEKK 381
                 55666668999************8777666666677788******888*************99988533444432222335566666555544 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.046
      HEAT_2  40 lededpavRraaaeaLga 57 
                 ++d+ + vR  aaeaLg 
  EPX70903.1 454 VSDTFEPVRSSAAEALGT 471
                 455556666666666663 PP

>> TAN  Telomere-length maintenance and DNA damage repair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.2   8.5e-07    0.0015       8     123 ..     295     407 ..     289     412 .. 0.74

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 8.5e-07
         TAN   8 LssskikeRnkaldeLkhllsskrnktslsdlkdkawheifeaLfklvekEkeaylkkkkssttksaaas..RLskaasal...Rllvekavs.klk.r 99 
                 +ss+k keR++ald L  +ls++       ++kd+++ +++  L k + k+ ++++  ++ ++  +a a+  RL+ + +a+     l e++ + k +  
  EPX70903.1 295 MSSTKWKERKEALDALVPVLSQP-------KIKDDDFFSLVALLSKSIIKDANIMVVMNA-ANCITALAKglRLNYSKYAItsvQALLERSKEkKQNvV 385
                 79*********************.......78**********************977655.33344333345998877765111566676666533367 PP

         TAN 100 ktlkalldhitqllpgpdgellep 123
                 +tl + +d++ +++p +d  + ep
  EPX70903.1 386 ETLSSAMDAVCDTIPFDD--VSEP 407
                 888888888888886543..5555 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0     0.091   1.6e+02       6      75 ..     115     187 ..     110     197 .. 0.76
   2 !   13.1   0.8   4.2e-05     0.075      38     128 ..     303     393 ..     282     427 .. 0.79

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.091
        Cnd1   6 airtlgcirvpnlveylvepLrkrLkDedpyVRktaaivvakL...ilndmvkekgflselaklleDenprVv 75 
                 ai +l  +   ++  +++epL  +L+ ++p V    + ++a L   +  +++  k ++ +l++l    +++V+
  EPX70903.1 115 AIEALMLMIEVDTAAPVIEPLLPSLSARSPKVITANVSAIADLieqFGTKIIPPKPIVGQLKSLFGHADKNVR 187
                 6666663334455678999999999999999999999999999555555688888899999998888887776 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 4.2e-05
        Cnd1  38 RktaaivvakLilndmvkekgflselak....lleDenprVvanalaalteiseksenaiynllpdiisklsdalnecsewgqitilefLlsyip 128
                 Rk a+ ++  ++++  +k+ +f+s +a     +++D n +Vv na +++t +++    +  +  +++++ l+    e s+++ ++++e+L+s ++
  EPX70903.1 303 RKEALDALVPVLSQPKIKDDDFFSLVALlsksIIKDANIMVVMNAANCITALAKGLRLNYSKYAITSVQALL----ERSKEKKQNVVETLSSAMD 393
                 8888989999999999999997776653111246*******************9975666667777777777....6688888888888887765 PP

>> NYD-SP28_assoc  Sperm tail C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.6   0.00016      0.29      35      56 ..     650     671 ..     646     673 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00016
  NYD-SP28_assoc  35 RaklieetesLekqNeeLrnlL 56 
                     R   i+e+ sL +qNeeL+ lL
      EPX70903.1 650 RGGSIQEIASLNEQNEELKILL 671
                     77789**************999 PP

>> ox_reductase_C  Putative oxidoreductase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.0    0.0022         4     104     139 ..      17      52 ..       4      54 .. 0.90
   2 ?    1.9   0.0      0.09   1.6e+02       9      39 ..     332     362 ..     325     377 .. 0.81

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0022
  ox_reductase_C 104 rltsaswkyksGavGslehavalqGtkystelevla 139
                     r+t   wk + Ga  +l+++ +l G   + +++++a
      EPX70903.1  17 RITHKVWKARLGAYEELNKSFSLSGSPTDSCFDLWA 52 
                     8999*****************************998 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.09
  ox_reductase_C   9 mkkiikennlkvvatnaryvsayehaakkaw 39 
                      k iik+ n+ vv+ +a   +a  +  + ++
      EPX70903.1 332 SKSIIKDANIMVVMNAANCITALAKGLRLNY 362
                     599**************99999877666555 PP

>> PRKG1_interact  cGMP-dependent protein kinase interacting domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.1        10   1.8e+04      32      44 ..     372     384 ..     360     394 .. 0.48
   2 ?   12.5   0.7   0.00011       0.2       2      35 ..     667     700 ..     623     729 .. 0.77
   3 ?   -2.4   0.1       5.3   9.4e+03      13      25 ..     789     801 ..     780     806 .. 0.67

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 10
  PRKG1_interact  32 seleklkqqrqes 44 
                     + le++k+++q+ 
      EPX70903.1 372 ALLERSKEKKQNV 384
                     3334433333332 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 0.00011
  PRKG1_interact   2 YkkLYeeekeenerLkreLeelekelselksele 35 
                      k L + e+ee+ rL+reL +++kels+l+    
      EPX70903.1 667 LKILLSLEREEKTRLQRELADVKKELSTLRDLQP 700
                     4667777888888888888888888888776333 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 5.3
  PRKG1_interact  13 nerLkreLeelek 25 
                     + rLk++++e+++
      EPX70903.1 789 TTRLKQKINEMKQ 801
                     5677777777765 PP

>> FliT  Flagellar protein FliT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   3.3   0.00057         1      15      78 ..     645     698 ..     641     701 .. 0.91
   2 ?   -3.5   0.1        10   1.8e+04      10      30 ..     782     802 ..     780     805 .. 0.62

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00057
                 HHHHHHHHHHHHHHCS--ST--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHTHHH CS
        FliT  15 aleaerqqlverlreldaaplspaereekrellrrilandaeirallqprldelqkllgalrrq 78 
                 +le++r   ++++++l+          e+ e l+ +l +++e +++lq++l+ ++k+l++lr  
  EPX70903.1 645 DLEENRGGSIQEIASLN----------EQNEELKILLSLEREEKTRLQRELADVKKELSTLRDL 698
                 78999999999999999..........99999999*************************9975 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 10
                 HHHHHHHHHHHHHHHHHHHCS CS
        FliT  10 Wdelaaleaerqqlverlrel 30 
                 W  +++l  +  q +++ +++
  EPX70903.1 782 WNKAIDLTTRLKQKINEMKQT 802
                 666666666666666655554 PP

>> ZapB  Cell division protein ZapB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.1         8   1.4e+04      27      35 ..     374     382 ..     366     391 .. 0.42
   2 ?    6.9   3.2    0.0048       8.6      17      56 ..     654     693 ..     645     714 .. 0.63
   3 ?    6.0   0.3     0.009        16      13      33 ..     782     802 ..     780     807 .. 0.91

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 8
        ZapB  27 ieeLkeene 35 
                 +e+ ke+++
  EPX70903.1 374 LERSKEKKQ 382
                 233333332 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0048
        ZapB  17 idtitlLqmeieeLkeeneelkeenreleeeneqlkeere 56 
                 i++i++L +++eeLk   +   ee+ +l++e+   k+e +
  EPX70903.1 654 IQEIASLNEQNEELKILLSLEREEKTRLQRELADVKKELS 693
                 5666666666666665555555555555555444444433 PP

  == domain 3  score: 6.0 bits;  conditional E-value: 0.009
        ZapB  13 iqkaidtitlLqmeieeLkee 33 
                 ++kaid  t+L+++i e+k+ 
  EPX70903.1 782 WNKAIDLTTRLKQKINEMKQT 802
                 79*****************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (811 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1191  (0.0664287); expected 358.6 (0.02)
Passed bias filter:                      645  (0.0359752); expected 358.6 (0.02)
Passed Vit filter:                        76  (0.00423894); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.74u 0.30s 00:00:01.04 Elapsed: 00:00:00.47
# Mc/sec: 5229.91
//
Query:       EPX70904.1  [L=491]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.055   13.9   0.1       0.49   10.9   0.0    2.6  4  Arrestin_C  Arrestin (or S-antigen), C-terminal domain
      0.059   13.6   0.0       0.22   11.8   0.0    1.8  2  OKR_DC_1_N  Orn/Lys/Arg decarboxylase, N-terminal domain


Domain annotation for each model (and alignments):
>> Arrestin_C  Arrestin (or S-antigen), C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.48   4.3e+03     104     116 ..     109     123 ..      86     139 .. 0.66
   2 ?   -2.5   0.0      0.73   6.5e+03      55      92 ..     209     245 ..     192     262 .. 0.68
   3 ?   10.9   0.0   5.4e-05      0.49      39     117 ..     277     355 ..     269     376 .. 0.74
   4 ?   -2.6   0.0      0.76   6.8e+03     116     131 ..     424     439 ..     391     441 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.48
                 EEEEEEEEEEEE..S CS
  Arrestin_C 104 vsYklkvkltls..g 116
                 ++Y+l +++ ++  +
  EPX70904.1 109 IHYELTINIVTNdnC 123
                 677777777776441 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.73
                 SEEEEEEEEEEEEE---B-TTEE.EEEEEEE.----B- CS
  Arrestin_C  55 snkkeknvvaksdsvkvtsaakdkletevelqiPeelt 92 
                 ++++ ++ ++   ++++ts ++++l+ +    iP+ l 
  EPX70904.1 209 HSTNSERMCNALGNKTPTSRSSKSLHESSDS-IPDRLS 245
                 6777777788888888888888888854444.775554 PP

  == domain 3  score: 10.9 bits;  conditional E-value: 5.4e-05
                 EEEEEEEEEEEESS..SEEEEEEEEEEEEE---B-TTEE.EEEEEEE.--..--B-----S---EEEEEEEEEEEEEEES.S CS
  Arrestin_C  39 ikvslvqhvdvcafnrsnkkeknvvaksdsvkvtsaakdkletevelqiP..eeltpssarnvelikvsYklkvkltlsg.s 117
                 i+v+lvq+v++  fn+  +  + v+   + ++ t++++  l+  ve+ +P  + + +s +  +  + v++k+ v++++s+ s
  EPX70904.1 277 IRVCLVQKVTFLLFNGPFRVSTTVL--YEDGRWTPPTVPGLHSRVEFMVPleDTIHGSVT-GNPHLLVKHKFYVSVHTSEpS 355
                 9*************65333333333..444555567777788888999997555555775.999**********99999323 PP

  == domain 4  score: -2.6 bits;  conditional E-value: 0.76
                 SSEEEEEEEEEEEEEB CS
  Arrestin_C 116 gsggelslelPivlgs 131
                 ++ ++++ +lP+ +++
  EPX70904.1 424 HKLKKFDFKLPVFIFH 439
                 4667788888888887 PP

>> OKR_DC_1_N  Orn/Lys/Arg decarboxylase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.39   3.5e+03      80     105 ..      21      46 ..      14      48 .. 0.87
   2 ?   11.8   0.0   2.4e-05      0.22      48     103 ..     417     472 ..     378     475 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.39
  OKR_DC_1_N  80 advlreidgfielledtpefiarqie 105
                 +++lr++ ++  ++ +t  f  +qi 
  EPX70904.1  21 VEDLRSVLKYRAYFTTTDTFFCKQIG 46 
                 68899999999999999999999995 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 2.4e-05
  OKR_DC_1_N  48 deaaelldeirernedlPvFllaetrtsedvpadvlreidgfielledtpefiarq 103
                  ++++l +++++  ++lPvF++ ++ +se   +  ++++    ++led++e ++++
  EPX70904.1 417 RNSQKLHHKLKKFDFKLPVFIFHRNLSSELSHLPPYSRNRDPYFYLEDDEEVMSSN 472
                 6899*******************988888888887777777777778888776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (491 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       529  (0.0295053); expected 358.6 (0.02)
Passed bias filter:                      324  (0.0180713); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 3389.94
//
Query:       EPX70905.1  [L=1329]
Description: ATP-dependent RNA helicase Ucp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.7e-14   53.4   0.4    8.5e-14   51.8   0.4    1.9  1  Helicase_C   Helicase conserved C-terminal domain
    9.1e-14   51.6   0.0    2.4e-13   50.2   0.0    1.8  1  OB_NTP_bind  Oligonucleotide/oligosaccharide-binding (OB)-fol
    1.3e-13   51.2   0.0    4.3e-13   49.5   0.0    2.0  1  HA2          Helicase associated domain (HA2)
    9.9e-10   38.7   2.1    1.9e-09   37.8   0.7    2.4  2  RWD          RWD domain
    1.5e-07   31.4   0.1      4e-07   30.0   0.1    1.6  1  DEAD         DEAD/DEAH box helicase
    0.00035   20.9   0.1    0.00086   19.6   0.1    1.7  1  AAA_22       AAA domain
     0.0017   18.7   0.0     0.0046   17.3   0.0    1.7  1  AAA_19       AAA domain
     0.0023   17.8   0.2      0.016   15.1   0.0    2.5  2  UBA          UBA/TS-N domain
     0.0051   15.9   0.0       0.01   14.9   0.0    1.4  1  T2SSE        Type II/IV secretion system protein
  ------ inclusion threshold ------
      0.049   14.0   0.0       0.14   12.5   0.0    1.8  1  AAA_16       AAA ATPase domain
      0.056   13.1   0.0       0.13   11.9   0.0    1.6  1  Stk19        Serine-threonine protein kinase 19
      0.058   12.7   0.0       0.19   11.0   0.0    1.8  2  ATPase       KaiC
       0.16   12.1   5.0        0.4   10.9   0.1    3.8  5  SH3BGR       SH3-binding, glutamic acid-rich protein


Domain annotation for each model (and alignments):
>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.8   0.4   6.2e-17   8.5e-14       8     110 ..     805     928 ..     798     929 .. 0.83

  Alignments for each domain:
  == domain 1  score: 51.8 bits;  conditional E-value: 6.2e-17
                 HHH..HHTTTTSEEEEEESSHHHHHH.HHHHHHHT.....TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSH. CS
  Helicase_C   8 ell..kleeeggkilifvntidrlek.vklllekk.....gikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnv. 97 
                 + +  +l+ ++g ilif++ ++++++ ++ +   k     g++v++lh++l++ ++++++++++  +++v+ +t+vae++i+i++v  Vi+ +  +++ 
  EPX70905.1 805 NQIdsELSLNKGSILIFLPGVSNINRcIQEI---KrncgdGFEVLPLHASLNTIDQRKVFRSYK--KRKVICSTNVAETSITINDVVAVIDSGRVKQId 898
                 4445567899************998554555...2347999**********************5..578*********************887776656 PP

                 .................HHHHHHHTTSSST CS
  Helicase_C  98 .................tsyiqriGRtgRa 110
                                  + + qr+GR+gR+
  EPX70905.1 899 ydlnrdlvtfketwaskAACRQRRGRAGRV 928
                 66667778999999999************7 PP

>> OB_NTP_bind  Oligonucleotide/oligosaccharide-binding (OB)-fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.2   0.0   1.7e-16   2.4e-13       1      81 [.    1160    1259 ..    1160    1262 .. 0.79

  Alignments for each domain:
  == domain 1  score: 50.2 bits;  conditional E-value: 1.7e-16
                   HHHHHHHHHTTCEE.................EEEETTCCEEETT.TCEEEEE-TTSTTTT.T...TSSSEEEEEEEEESSSEEEEEEEEE-HHHHH CS
  OB_NTP_bind    1 lraillaGlypqia.................rkdpskkdyktar.tktrvfihpsSvlak.nekekepewvvytelvettklylrdltaidpawLl 77  
                   l ai++ +l p+i+                 + d++ +  k    +k r fihp+Sv++  +++ ++ ++++y+ +vettk++l+++t+i++  ++
   EPX70905.1 1160 LSAIIAGALRPNIVkcaypdkkyvssssgsiEVDQEARLTKFFDkHKNRLFIHPNSVMFTnSPNPSKATFIAYERKVETTKPFLQNCTPINTFGMA 1255
                   6799**********55555555544444444466666656666557*************9776777777************************999 PP

                   HHST CS
  OB_NTP_bind   78 lfag 81  
                   l++ 
   EPX70905.1 1256 LLGT 1259
                   9986 PP

>> HA2  Helicase associated domain (HA2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.5   0.0   3.1e-16   4.3e-13       1      78 [.    1004    1094 ..    1004    1137 .. 0.74

  Alignments for each domain:
  == domain 1  score: 49.5 bits;  conditional E-value: 3.1e-16
         HA2    1 AlelLvalgALdeegnlTelGrkmaelPlsprlakmLlaaaeleegcldevitivAalsveeifleeneeekeeeee...............e 78  
                  A+  L+++gAL+e+++lT lG+ +++lP++ +l+k+L++++ +  g ++++++i A+ls +++fl+ ++ +  ++e                +
  EPX70905.1 1004 AIDKLIQVGALTENEELTGLGEYLVALPVDLKLGKLLVLSSIF--GFIEPALSISAVLSSKSPFLHDDDTRTLRSELsggwgdvltdakvydQ 1094
                  7789************************************777..*********************998876655445666555555555440 PP

>> RWD  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.8   0.7   1.4e-12   1.9e-09       4     115 ..     408     504 ..     407     505 .. 0.91
   2 ?   -3.4   0.0       8.4   1.2e+04      80     105 ..     795     820 ..     769     821 .. 0.62

  Alignments for each domain:
  == domain 1  score: 37.8 bits;  conditional E-value: 1.4e-12
                 HHHHHHHHHHSTTTCCCCHT--EE--S-EEEEEEECECCCC....TT-CEEEEEEEEE-SS.TTSS--EEEEEECCSS-HHHHHHHHHHHHHHHHHTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RWD   4 eqEleaLesIypdefevienenysikleikikldededeedsefeekkkpslkleiklpee.YPeeaPiislsstenlpkeqvksleekleelaeenlg 101
                 ++E eaL+sIy+++  v+++   s    +kik++ ++de           ++++e+k p + YP+ +P i +sst+ +  + ++s+ ++l  +a++  g
  EPX70905.1 408 KEEAEALQSIYENKVLVHDD---S----CKIKVNAPSDE---------FGQIYIEFKPPAHpYPQNIPLIFISSTKRMASYIKLSIIRRLILYAQNYVG 490
                 58*************99994...4....67788888776.........568*********99*********************************99** PP

                 S--CHHHHHHHHHH CS
                 xxxxxxxxxxxxxx RF
         RWD 102 epvifalidwlken 115
                 ep++  l+d  +en
  EPX70905.1 491 EPMLDVLYDYFQEN 504
                 ****9999999998 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 8.4
                 S-HHHHHHHHHHHHHHHHHTTTS--C CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RWD  80 lpkeqvksleekleelaeenlgepvi 105
                 ++ + ++++ ++++++++ n+g   i
  EPX70905.1 795 VDYNLISQVVNQIDSELSLNKGSILI 820
                 44455666666666666666666555 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.1   2.9e-10     4e-07      13     170 ..     595     742 ..     583     747 .. 0.77

  Alignments for each domain:
  == domain 1  score: 30.0 bits;  conditional E-value: 2.9e-10
                 TTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTT.STSEEEEEETTSSHHHHHHHHHTTCSEEEEEHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  13 gggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkky.idlrvlliiggvaardqlskldngvdivvgtpgrldd 110
                 + +++++++eTGsGK++  +  +l++++++ + t   +++  P r  a   +++++    + ++ +v   ++g++       l++++ + + t+g l++
  EPX70905.1 595 SCQSIIISGETGSGKSTQVVQFILDHFLSEGHGTVANVVCTQPRRISAMSLAERVSYERTTsLGKEVGYSVHGDKC------LSKETLLEFCTTGLLLR 687
                 44789***********************988888899*************99999766654355555555556555......33445567899999999 PP

                 HHH.CTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTST.TTSEEEEEESSBS CS
                 xxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxx RF
        DEAD 111 lls.tgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgk.lqrqvivlSATlp 170
                  ++  g   l+ ++++V+DE+++ + +   d + ++l+++     + + l+  ++++SAT++
  EPX70905.1 688 RIQlHGLAYLRTLSCIVVDEVHERSIE--NDILLALLKAI---LPRVPnLK--IVLMSATVN 742
                 775145555*************99988..78888888888...45555445..*******98 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.1   6.2e-07   0.00086       4     128 ..     595     737 ..     591     747 .. 0.70

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 6.2e-07
      AAA_22   4 tagilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsst..sskdllrellralglelka.................erlsseell.eal 82 
                 +++++++ Ge+G+GK+t + ++   +    +  e + +v+ v ++++   s  +l++++  + + +l +                  +  +  ll +++
  EPX70905.1 595 SCQSIIISGETGSGKSTQVVQFILDH----FLSEGHGTVANVVCTQPRriSAMSLAERVSYERTTSLGKevgysvhgdkclsketlLEFCTTGLLlRRI 689
                 7899*************888887776....233335555588888888889999988888777777777889999999888877775555555555777 PP

      AAA_22  83 eqalrarav.ielliiDEaqhlrs...eealeeLrsllnlsrkgvqliLv 128
                 + +  a+ +  +++++DE++   s   + +l  L+ +l  +  +++++L+
  EPX70905.1 690 QLHGLAYLRtLSCIVVDEVHER-SienDILLALLKAILP-RVPNLKIVLM 737
                 77777777799*********97.3333444444444333.3556666665 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   3.3e-06    0.0046      12     128 ..     598     728 ..     590     736 .. 0.68

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 3.3e-06
      AAA_19  12 vllvtaGpGtGK.TrvlkhivallvelggvkpeeillvaftgrAakelrerlaalgae.......atTiHrlalldfddlltealelle.......... 92 
                  +++ +  G+GK T+v++ i+ +++++g+  ++++++  + + +a+ l+er+ ++++         + +H+   l  ++ll       e          
  EPX70905.1 598 SIIISGETGSGKsTQVVQFILDHFLSEGHGTVANVVCTQPRRISAMSLAERV-SYERTtslgkevGYSVHGDKCLSKETLL-------Efcttglllrr 688
                 5789999*****66789999******************************98.4444434444454444433333333333.......22233333456 PP

      AAA_19  93 .eaeeekklqeeellivDEfqd..vd.elqyrLlkallge 128
                  + +    l+   +++vDE+ +  ++ +   +Llka+l++
  EPX70905.1 689 iQLHGLAYLRTLSCIVVDEVHErsIEnDILLALLKAILPR 728
                 6555666774445******987224456677888888754 PP

>> UBA  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   1.2e-05     0.016       5      37 .]     284     315 ..     281     315 .. 0.94
   2 ?   -1.2   0.1       1.5   2.1e+03      23      37 .]     370     384 ..     369     384 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.2e-05
                 HHHHHHHTTS-HHHHHHHHHHTTTSHHHHHHHH CS
         UBA   5 aiqrLveMGFdreevveALratgnNeErAveyL 37 
                  + +Lv++GF + +++eA+ ++  ++E A+e+L
  EPX70905.1 284 IVKDLVSLGFRDLHAKEACQYCS-SLEEALEWL 315
                 6899*******************.********9 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 1.5
                 HHHTTTSHHHHHHHH CS
         UBA  23 LratgnNeErAveyL 37 
                 L +  nN+  A+eyL
  EPX70905.1 370 LQRFRNNLASAAEYL 384
                 566789********9 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   7.5e-06      0.01     116     146 ..     583     613 ..     542     635 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 7.5e-06
       T2SSE 116 ekiaevlrkavrerglilvsGgTgsGKttll 146
                  k +e+l + +++ ++i++sG TgsGK+t +
  EPX70905.1 583 SKSKETLLSYLQSCQSIIISGETGSGKSTQV 613
                 44555666666889**************986 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0    0.0001      0.14      23      63 ..     595     637 ..     585     731 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.0001
      AAA_16  23 rpelvllsGesGvGKsslv.rellralekdg.giflrgkcdql 63 
                 +++++++sGe G+GKs+ v + +l+++  +g g +++  c+q 
  EPX70905.1 595 SCQSIIISGETGSGKSTQVvQFILDHFLSEGhGTVANVVCTQP 637
                 4589************977699999999997688898888887 PP

>> Stk19  Serine-threonine protein kinase 19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   9.6e-05      0.13      93     156 ..     975    1031 ..     942    1043 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 9.6e-05
       Stk19   93 esseleeeekvlekFlellkenptalsisasslseeeisaLvraGfLtssaneiesaeyslslP 156 
                  ++++ +++  +++kF+++l + pt++++      +  i++L+++G Lt +++ +   ey ++lP
  EPX70905.1  975 NNKDSDKKG-SVKKFMQCLLDPPTDQAV------DTAIDKLIQVGALTENEELTGLGEYLVALP 1031
                  333333333.69****************......889*************99999********9 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       2.3   3.2e+03     171     204 ..     237     269 ..     231     289 .. 0.81
   2 ?   11.0   0.0   0.00014      0.19      19      51 ..     596     628 ..     590     641 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 2.3
      ATPase 171 aggygveefivdgvivLdlkeieeelvRtleivk 204
                 +++y+ ++ +v+ ++ L++++  e+l R+l+i+ 
  EPX70905.1 237 VSKYDFKH-AVTLNMSLNHRQSIETLLRSLNIWD 269
                 56777888.8888999999999999999999996 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00014
      ATPase  19 grvvlitGepGtGKtifalqFlikgaekygepg 51 
                  +++ i+Ge+G+GK++ + qF++    + g  +
  EPX70905.1 596 CQSIIISGETGSGKSTQVVQFILDHFLSEGHGT 628
                 57899*****************99988877655 PP

>> SH3BGR  SH3-binding, glutamic acid-rich protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       2.8   3.9e+03      46      74 ..      35      63 ..      14      76 .. 0.51
   2 ?   10.9   0.1   0.00029       0.4      30      95 ..      79     151 ..      68     155 .. 0.70
   3 ?   -3.7   0.1       9.8   1.4e+04      38      72 ..     526     559 ..     524     560 .. 0.74
   4 ?   -2.8   0.0       5.3   7.3e+03      10      40 ..     872     902 ..     868     927 .. 0.67
   5 ?    0.7   0.0      0.43     6e+02       4      29 ..    1180    1204 ..    1178    1211 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 2.8
                HHHHHHCST-CCCS-SSSS--S-EEEETT CS
      SH3BGR 46 relmrenaapeekkpengkplPPqifned 74
                 ++ re+++ + +  + ++p+  q++ ++
  EPX70905.1 35 GKEAREKVGNKAEPDTAPRPTAKQLVGGS 63
                23344555322233334455555555555 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00029
                 TT--EEEEETTT.-HHHHHHHHHCST-CCCS-SS......SS--S-EEEETTEEEEEHHHHHHHHTTT-HHHH CS
      SH3BGR  30 kkiefdevDitk.deeerelmrenaapeekkpen......gkplPPqifnedeYcGDydaffeakeentleef 95 
                 +k ++++ Di   + + ++++   +  ++++p+n       + +PP+if+e+eY  + ++ +ea++  ++++ 
  EPX70905.1  79 QKSKWEKPDIQVkQTKSKKYLFVSVRLSKRDPKNasvfdhANLVPPKIFYEKEYFPEKETLVEARNVGAVYAL 151
                 56677777877645556666666664455556551111114568********************999888765 PP

  == domain 3  score: -3.7 bits;  conditional E-value: 9.8
                 ETTT-HHHHHHHHHCST-CCCS-SSSS--S-EEEE CS
      SH3BGR  38 DitkdeeerelmrenaapeekkpengkplPPqifn 72 
                 D++k e+  + m++++ p +k  ++ + l  +i+n
  EPX70905.1 526 DVSKTEDAISNMQKDT-PRQKLFKRDSELDKKIYN 559
                 8999999999999888.787776666666666665 PP

  == domain 4  score: -2.8 bits;  conditional E-value: 5.3
                 S-SSHHHHHHHHHHHHHHHHTT--EEEEETT CS
      SH3BGR  10 ssgskeikkkqqevlriLdakkiefdevDit 40 
                 s+   e+    ++v+ ++d+ +++    D+ 
  EPX70905.1 872 STNVAETSITINDVVAVIDSGRVKQIDYDLN 902
                 4555666777889999999977665555554 PP

  == domain 5  score: 0.7 bits;  conditional E-value: 0.43
                  EEEE-SS-SSHHHHHHHHHHHHHHHH CS
      SH3BGR    4 kvyvasssgskeikkkqqevlriLda 29  
                  k yv+sssgs e+ +   + +++ d 
  EPX70905.1 1180 KKYVSSSSGSIEVDQ-EARLTKFFDK 1204
                  66**********975.4566666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1329 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1023  (0.0570584); expected 358.6 (0.02)
Passed bias filter:                      666  (0.0371465); expected 358.6 (0.02)
Passed Vit filter:                        67  (0.00373696); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.95u 0.30s 00:00:01.25 Elapsed: 00:00:00.47
# Mc/sec: 8532.70
//
Query:       EPX70906.1  [L=791]
Description: ribosome biogenesis ATPase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.9e-40  138.6   0.0      4e-21   76.0   0.0    3.9  3  ABC_tran      ABC transporter
      4e-17   63.0  14.2    7.4e-06   26.0   0.0    5.2  5  AAA_21        AAA domain, putative AbiEii toxin, Type IV TA s
    8.4e-10   38.6   6.3    8.4e-10   38.6   6.3    4.8  3  ABC_tran_Xtn  ABC transporter
    1.2e-06   28.8   0.1     0.0091   16.3   0.0    3.6  3  AAA_22        AAA domain
    1.3e-06   28.1  20.7      0.032   13.7   9.1    5.4  4  SMC_N         RecF/RecN/SMC N terminal domain
    3.5e-06   26.7   0.3      0.074   12.8   0.0    2.8  2  AAA_29        P-loop containing region of AAA domain
      7e-06   26.5   0.4      0.052   14.0   0.0    3.9  2  AAA           ATPase family associated with various cellular 
      4e-05   24.1   0.0      0.036   14.4   0.0    2.8  2  AAA_16        AAA ATPase domain
    0.00014   21.8   0.0      0.032   14.1   0.0    2.8  2  RsgA_GTPase   RsgA GTPase
    0.00041   20.1   0.7       0.15   11.8   0.0    3.1  3  AAA_30        AAA domain
      0.001   19.3   0.0      0.041   14.1   0.0    2.7  2  AAA_33        AAA domain
     0.0019   18.5   0.0       0.21   11.8   0.0    3.0  2  AAA_28        AAA domain
     0.0039   17.2   0.0      0.044   13.8   0.0    2.3  2  TsaE          Threonylcarbamoyl adenosine biosynthesis protei
      0.004   17.2   0.0       0.24   11.5   0.0    3.1  2  MMR_HSR1      50S ribosome-binding GTPase
     0.0055   16.3   0.0        4.1    6.9   0.0    3.2  3  AAA_25        AAA domain
     0.0069   16.3   0.2       0.27   11.1   0.1    2.6  2  NTPase_1      NTPase
     0.0086   16.1   0.2       0.83    9.6   0.0    3.5  3  AAA_5         AAA domain (dynein-related subfamily)
     0.0088   16.0   0.4       0.76    9.7   0.0    2.7  2  NACHT         NACHT domain
     0.0089   15.6   0.1       0.16   11.5   0.0    2.6  2  cobW          CobW/HypB/UreG, nucleotide-binding domain
  ------ inclusion threshold ------
      0.011   14.9   3.3       0.64    9.2   0.0    3.5  4  NB-ARC        NB-ARC domain
      0.012   16.1   0.2      0.012   16.1   0.2    5.5  3  AAA_23        AAA domain
      0.016   14.3   0.3       0.21   10.6   0.0    2.5  3  T2SSE         Type II/IV secretion system protein
      0.023   14.7   0.8         10    6.2   0.0    3.6  2  AAA_14        AAA domain
      0.027   12.0   0.1      0.027   12.0   0.1    3.4  3  DUF3584       Protein of unknown function (DUF3584)
      0.031   14.4   0.1      0.031   14.4   0.1    2.2  1  KapB          Kinase associated protein B
      0.032   14.8   0.0      0.032   14.8   0.0    4.9  4  AAA_18        AAA domain
      0.038   13.7  40.2       0.39   10.4   0.2    5.7  5  AAA_15        AAA ATPase domain
      0.041   13.2   0.0        0.3   10.4   0.0    2.3  2  FtsK_SpoIIIE  FtsK/SpoIIIE family
      0.043   13.3   0.0       0.59    9.6   0.0    2.3  2  AAA_7         P-loop containing dynein motor region
       0.07   12.8   0.0         26    4.5   0.0    3.1  3  IstB_IS21     IstB-like ATP binding protein
      0.072   13.5   0.0        5.3    7.5   0.0    2.8  2  RNA_helicase  RNA helicase
       0.11   12.9   0.8        8.3    6.7   0.1    3.0  2  AAA_19        AAA domain
       0.13   12.0   9.7       0.39   10.4   0.0    3.8  2  AAA_24        AAA domain
       0.31   10.6   0.0       0.31   10.6   0.0    3.5  2  AAA_27        AAA domain
        1.2    9.4   5.4         21    5.4   0.1    3.9  3  SbcCD_C       Putative exonuclease SbcCD, C subunit


Domain annotation for each model (and alignments):
>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.3   0.0   8.6e-22   4.4e-19       2     137 .]     257     414 ..     256     414 .. 0.84
   2 ?   -1.5   0.2       6.6   3.4e+03      52      85 ..     492     516 ..     444     543 .. 0.55
   3 !   76.0   0.0   7.8e-24     4e-21       2     137 .]     576     706 ..     575     706 .. 0.88

  Alignments for each domain:
  == domain 1  score: 69.3 bits;  conditional E-value: 8.6e-22
                 EEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEE.......EETTCEGGG.........B-HHHCCHCEEEE-SS--S-TTSBHHHH..... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxx.........xxxxxxxxxxxxxxxxxxxxxxxxxxxx..... RF
    ABC_tran   2 knvslklkegekvaivGenGaGKStLlkllagllkpteGei.......lldgkdlke.........qeleslrkeigvlpqepqlfpeltvren..... 79 
                 k+ +l+l +g++++++ +nG+GKStLl ++a    p+  ++       ++ g    +         +  e+ rk+++++ ++   +p++++ e      
  EPX70906.1 257 KDSELSLINGRRYGLIAPNGTGKSTLLHAIACGQIPAPQSLdfylldrEYMG----NsltcveavlDINEQERKHLETIMEDLLDDPDKNAVELdtiqt 351
                 67889999****************************9999966655443333....245558888889999999*******999999998666689999 PP

                 ........HHHTCHHHHHHHSTTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 ........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  80 ........esdeeiekalsklglkelkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137
                         +s+  ++k+l+ l+ ++   + + ++++ LSgG++ r+alar+l+ kp+l++lDEpt+
  EPX70906.1 352 rlteletdNSEHLVYKILKGLQFTD---EMIAKRTEDLSGGWRMRIALARILFIKPTLMMLDEPTN 414
                 9999975555555999999888665...8888999******************************8 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 6.6
                 B-HHHCCHCEEEE-SS--S-TTSBHHHHHHHTCH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  52 qeleslrkeigvlpqepqlfpeltvrenesdeei 85 
                 +++ +l++++ +   ++q + +          ++
  EPX70906.1 492 KDMAKLQNKLNMTGSDQQKKAKA---------KV 516
                 33333333333333332222222.........22 PP

  == domain 3  score: 76.0 bits;  conditional E-value: 7.8e-24
                 EEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS..--S-TTSBHHHH.......HHHTCHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxx.......xxxxxxxxxxxx RF
    ABC_tran   2 knvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqe..pqlfpeltvren.......esdeeiekalsk 91 
                 +n+++ l  ++++a+vG+nGaGK+tL++l++++++pt G++            ++   +++ + q+  +ql+ +l++ +        + + e+ +++ +
  EPX70906.1 576 SNLNFGLDLNSRIALVGPNGAGKTTLIRLILEKVQPTVGSV-----------VHHHGLRLALFNQHmgDQLDMRLSAVDWlrtkfgnKPEGEMRRIIGR 663
                 799**************************************...........5677888888888866666666665555788888799999******* PP

                 STTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  92 lglkelkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137
                 +gl++ k +v+   +s+LS Gq++rv  a + +++p +lllDEpt+
  EPX70906.1 664 YGLTG-KSQVI--PMSQLSDGQRRRVLFAFLGMTQPHILLLDEPTN 706
                 *****.55555..47******************************8 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   2.9       1.7   8.7e+02     123     217 ..      57     149 ..      30     197 .. 0.53
   2 !   13.2   0.0   0.00011     0.057       3      23 ..     270     290 ..     269     315 .. 0.82
   3 !   11.6   0.1   0.00036      0.18     250     297 ..     399     442 ..     384     448 .. 0.83
   4 !   16.5   0.2   1.1e-05    0.0058       3      19 ..     589     605 ..     588     616 .. 0.91
   5 !   26.0   0.0   1.4e-08   7.4e-06     222     302 ..     663     737 ..     623     738 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 1.7
      AAA_21 123 svfslkelsvsepndlqfgkaltditsrawsllllldglrkerigllnifadyfgfakekrllqrlvrslklveielsdlgegeeliasvderlr 217
                 +++++k+ s+ + +++q++k  + + ++a++ ++++++    + ++ +   +  +++++k  ++   +sl+++ +els+ +e+ee ++s +e  +
  EPX70906.1  57 DGEEEKSVSPPKKSSRQNKKPVNAFAAFADEQEDEDESES--EESVVEEYPKKKKKSDKKSSRKNAFDSLNEDMDELSLKDEKEETSTSKKEKKK 149
                 4444444444444444444444444444444444444433..33344444444444444444444444444444444444444443333333322 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 0.00011
      AAA_21   3 vliGpNgsGKSnLLdaldlla 23 
                 +li pNg+GKS+LL a+ + +
  EPX70906.1 270 GLIAPNGTGKSTLLHAIACGQ 290
                 6999*************7764 PP

  == domain 3  score: 11.6 bits;  conditional E-value: 0.00036
      AAA_21 250 allralkkgsllliDEpEngLHPkllrrllellkelsrngaQviltTH 297
                 +l+  +   +l  +DEp n+L+ ++++ l e l  + + g  v++t H
  EPX70906.1 399 ILFIKP---TLMMLDEPTNHLDLEAVAYLEEYLTHEME-GHTVLITCH 442
                 444433...9***********************99999.********9 PP

  == domain 4  score: 16.5 bits;  conditional E-value: 1.1e-05
      AAA_21   3 vliGpNgsGKSnLLdal 19 
                 +l+GpNg+GK++L++++
  EPX70906.1 589 ALVGPNGAGKTTLIRLI 605
                 79*************98 PP

  == domain 5  score: 26.0 bits;  conditional E-value: 1.4e-08
      AAA_21 222 vflengdgqelparelSdGtkrllalltallralkkgsllliDEpEngLHPkllrrllellkelsrngaQviltTHSplll 302
                 ++   g+ q +p+++lSdG++r   l++ l  + +   +ll+DEp n L+   +  l++ l++     + v++ TH+  l+
  EPX70906.1 663 RYGLTGKSQVIPMSQLSDGQRRR-VLFAFLGMTQP--HILLLDEPTNALDIDTIDALADALNNFD---GGVVFITHDFRLI 737
                 566788999*************9.55555555555..9***********************9995...5*******96665 PP

>> ABC_tran_Xtn  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   3.7     0.012       6.2      29      76 ..      83     131 ..      74     143 .. 0.81
   2 !   38.6   6.3   1.6e-12   8.4e-10       1      75 [.     455     527 ..     455     539 .. 0.89
   3 ?    2.4   0.9      0.32   1.6e+02      43      67 ..     766     790 ..     747     791 .] 0.76

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.012
  ABC_tran_Xtn  29 qqkayekqqkeikkleefIerfrakakkakqaqsrekaLekl.ekiekp 76 
                   + +++++ ++e + +e+++e + +k kk+ +  sr+ a++ l e++++ 
    EPX70906.1  83 AFADEQEDEDESESEESVVEEYPKKKKKSDKKSSRKNAFDSLnEDMDEL 131
                   678899999*******************************996555544 PP

  == domain 2  score: 38.6 bits;  conditional E-value: 1.6e-12
  ABC_tran_Xtn   1 velengklteYkGnYseyleekeerleqqqkayekqqkeikkleefIerfrakakkakqaqsrekaLeklekiek 75 
                   ++l+++kl +Y+GnY+ +l+ + er +q +k++++q+k ++kl++  +  ++   ++k+a++++ka++k  + +k
    EPX70906.1 455 IHLHHHKLDYYSGNYDVFLKVRGERDAQLAKKARQQEKDMAKLQNKLNMTGS--DQQKKAKAKVKAMDKRLEKDK 527
                   69*******************************************9999999..999999999999999833333 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.32
  ABC_tran_Xtn  43 leefIerfrakakkakqaqsrekaL 67 
                   l+e I++ r+++k+a  a+++ kaL
    EPX70906.1 766 LKEQIAKDRENEKEAELAKQKSKAL 790
                   5788888888888888888888877 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.073        37      10      26 ..     271     287 ..     268     376 .. 0.70
   2 ?    3.4   0.1      0.17        85      36      71 ..     425     486 ..     413     510 .. 0.72
   3 !   16.3   0.0   1.8e-05    0.0091       8     122 ..     588     724 ..     584     737 .. 0.70

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.073
      AAA_22  10 vtGesGtGKTtllrrll 26 
                 ++++ GtGK+tll  ++
  EPX70906.1 271 LIAPNGTGKSTLLHAIA 287
                 6899********98876 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.17
      AAA_22  36 ee.....erpevvfvtlpsstsskdllrellralglelka.....................e 71 
                 ee     ++ ++v++t+  + ++ ++++++ +  +++l++                     +
  EPX70906.1 425 EEyltheMEGHTVLITCHTQDTLNEVCTDIIHLHHHKLDYysgnydvflkvrgerdaqlakK 486
                 33344458999*********************999999987777777777766666666653 PP

  == domain 3  score: 16.3 bits;  conditional E-value: 1.8e-05
      AAA_22   8 lvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelka.........................erlsseellea 81 
                 ++++G+ G+GKTtl+r +le+          +p+v +v   ++  ++ + +++  +l+ +l+a                          ++s+   +++
  EPX70906.1 588 IALVGPNGAGKTTLIRLILEKV---------QPTVGSVVHHHGLRLALFNQHMGDQLDMRLSAvdwlrtkfgnkpegemrriigryglTGKSQVIPMSQ 677
                 789******************7.........55555666666668888888888888888888888888887777777777777777544444455566 PP

      AAA_22  82 leqalrarav........ielliiDEaqh.lrseealeeLrsllnlsrkg 122
                 l +  r+r          +++l++DE  + l   + +  L + ln   ++
  EPX70906.1 678 LSDGQRRRVLfaflgmtqPHILLLDEPTNaL-DIDTIDALADALN--NFD 724
                 6666666666777777777788888877767.5555555555555..444 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   9.1   6.3e-05     0.032     135     205 ..     180     450 ..      84     462 .. 0.62
   2 ?   -0.3   1.2       1.2     6e+02      56     128 ..     475     548 ..     470     552 .. 0.68
   3 !    7.1   0.0    0.0065       3.3      27      42 ..     588     603 ..     578     607 .. 0.84
   4 !    9.4   0.0    0.0012      0.63     129     212 ..     670     747 ..     661     754 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 6.3e-05
                 T.................................................................................................. CS
                 x.................................................................................................. RF
       SMC_N 135 e.................................................................................................. 135
                 e                                                                                                  
  EPX70906.1 180 Eknessgngplnqnqnlkdgllsgrlifayasgqkvsadgsdpsagitvtgnllsppnsrdlqveklsvsaygkhlikdselslingrrygliapngtg 278
                 255555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 PP

                 ................................................................................................... CS
                 ................................................................................................... RF
       SMC_N 136 ................................................................................................... 135
                                                                                                                    
  EPX70906.1 279 kstllhaiacgqipapqsldfylldreymgnsltcveavldineqerkhletimedllddpdknaveldtiqtrlteletdnsehlvykilkglqftde 377
                 555555555555555555555555555555555555555555555555555555555555555555555555555555555556666666777777777 PP

                 .......CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC- CS
                 .......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 136 .......lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemleka 205
                         LSgG +  +ala ++ i+      l++lDe   +LD + v+ + e+l ++ +   ++++++++++l+++
  EPX70906.1 378 miakrteDLSGGWRMRIALARILFIK----PTLMMLDEPTNHLDLEAVAYLEEYLTHEMEGHTVLITCHTQDTLNEV 450
                 88888889******999999987664....4699**************************************99986 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 1.2
                 TTCHCCCCCC--BTTCSSTTEEEEEEEE..EETTEESSSSSSCEEEEEEEETTSEEEEEETTEEE-HHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  56 lrseklsdlihkskekasvkkaeveitf..dnedkklkiekeevsisrrvkrkgeseykingkevtkkevselle 128
                 +r e+  +l +k +++++ + a+++  +  + +d++ k +++   + +r++++++s   ++++ +++k++   ++
  EPX70906.1 475 VRGERDAQLAKK-ARQQEKDMAKLQNKLnmTGSDQQKKAKAKVKAMDKRLEKDKQSGKVLDEEIIQEKQLVIRFQ 548
                 677777788887.56666666666655511555555445555556677888889999999999999998877766 PP

  == domain 3  score: 7.1 bits;  conditional E-value: 0.0065
                 EEEEESTTSSHHHHHH CS
                 xxxxxxxxxxxxxxxx RF
       SMC_N  27 taivGpNGSGKsnlld 42 
                  a+vGpNG+GK+ l+ 
  EPX70906.1 588 IALVGPNGAGKTTLIR 603
                 589*********9986 PP

  == domain 4  score: 9.4 bits;  conditional E-value: 0.0012
                 CTT-STTCS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC-SCEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 129 sagiskelLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemlekadklvgvt 212
                 s+ i +++LS G++      +lfA   + +  + llDe   aLD   + ++a+ l++      ++ i+++ +++ ++ + + v 
  EPX70906.1 670 SQVIPMSQLSDGQRRR----VLFAFLGMTQPHILLLDEPTNALDIDTIDALADALNNFD--GGVVFITHDFRLIDQVAEEIWVV 747
                 6778888999999985....56776677777799*********************9988..66777777777777665555554 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.0   0.00051      0.26      25      44 ..     269     288 ..     250     299 .. 0.79
   2 !   12.8   0.0   0.00015     0.074      13      39 ..     576     602 ..     573     606 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00051
      AAA_29  25 tlltGpsGsGKSTllDAiqa 44 
                 + l+ p+G+GKSTll Ai+ 
  EPX70906.1 269 YGLIAPNGTGKSTLLHAIAC 288
                 557779*********99975 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 0.00015
      AAA_29  13 dghtieidlkgatlltGpsGsGKSTll 39 
                 ++  + +dl++ + l+Gp+G+GK+Tl+
  EPX70906.1 576 SNLNFGLDLNSRIALVGPNGAGKTTLI 602
                 55567778888899************8 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0     0.006       3.1       3      50 ..     271     318 ..     269     383 .. 0.74
   2 !   14.0   0.0    0.0001     0.052       2      25 ..     589     612 ..     588     742 .. 0.66

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.006
                 EESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHH CS
         AAA   3 lyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelf 50 
                 l+ p GtGK++l +a+a        +++   l  +y+g+s   +++++
  EPX70906.1 271 LIAPNGTGKSTLLHAIACGQIPAPQSLDFYLLDREYMGNSLTCVEAVL 318
                 788*************97743334444444444555555555555555 PP

  == domain 2  score: 14.0 bits;  conditional E-value: 0.0001
                 EEESSTTSSHHHHHHHHHHHHTHE CS
         AAA   2 llyGppGtGKTllakavakelgve 25 
                  l+Gp G GKT+l++ + ++++ +
  EPX70906.1 589 ALVGPNGAGKTTLIRLILEKVQPT 612
                 699****************97533 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.0     0.018         9      29      91 ..     271     341 ..     238     417 .. 0.56
   2 !   14.4   0.0   7.1e-05     0.036      27      60 ..     588     621 ..     581     730 .. 0.72

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.018
      AAA_16  29 lsGesGvGKsslvrellr.alekd...............ggiflrgkcdqlesaipysalaqalareellrqlldeaes 91 
                 l+ + G+GKs+l+ +++  ++ +                   ++++  d +e++       +    e+++++lld++++
  EPX70906.1 271 LIAPNGTGKSTLLHAIACgQIPAPqsldfylldreymgnSLTCVEAVLDINEQE-------RKH-LETIMEDLLDDPDK 341
                 66799********99984344433556666666666653233344444444333.......223.23666666666333 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 7.1e-05
      AAA_16  27 vllsGesGvGKsslvrellralekdggiflrgkc 60 
                 + l+G+ G GK++l+r +l+ ++ + g ++  + 
  EPX70906.1 588 IALVGPNGAGKTTLIRLILEKVQPTVGSVVHHHG 621
                 689*****************99998443333333 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.059        30      95     120 ..     262     287 ..     236     297 .. 0.72
   2 !   14.1   0.0   6.2e-05     0.032     100     134 ..     586     620 ..     569     622 .. 0.86

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.059
                  HHCTTSEEEEECSTTSSHHHHHHHHC CS
  RsgA_GTPase  95 ellkdktsvlvGqSGvGKStLinall 120
                  +l++++   l+ + G GKStL+ a++
   EPX70906.1 262 SLINGRRYGLIAPNGTGKSTLLHAIA 287
                  3455688889999*********9986 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 6.2e-05
                  SEEEEECSTTSSHHHHHHHHCTT-----S------ CS
  RsgA_GTPase 100 ktsvlvGqSGvGKStLinallpelelktgevsekl 134
                  + ++lvG+ G+GK+tLi  +l++ +  +g+v +++
   EPX70906.1 586 SRIALVGPNGAGKTTLIRLILEKVQPTVGSVVHHH 620
                  5678*********************9999998775 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.048        24      23      39 ..     271     287 ..     261     290 .. 0.84
   2 ?   -0.9   0.3       2.3   1.2e+03     144     175 ..     476     507 ..     467     526 .. 0.70
   3 !   11.8   0.0   0.00029      0.15      22     119 ..     589     727 ..     584     735 .. 0.70

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.048
      AAA_30  23 ltGpAGtGKttalkalr 39 
                 l +p GtGK+t+l a++
  EPX70906.1 271 LIAPNGTGKSTLLHAIA 287
                 77999********9985 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 2.3
      AAA_30 144 agigtaeLtevvRqkeseeraaalalregdae 175
                 +g + a+L +  Rq+e++++++ ++l+    +
  EPX70906.1 476 RGERDAQLAKKARQQEKDMAKLQNKLNMTGSD 507
                 67788999999999999999999988844333 PP

  == domain 3  score: 11.8 bits;  conditional E-value: 0.00029
      AAA_30  22 vltGpAGtGKttalkalreaweaa.ggrviglAptgkaAkv.Laeelgieastiakllkrlk..................................... 81 
                 +l+Gp G+GKtt+++ + e ++   g  v+      +  ++ ++++l+++ s ++ l ++ +                                     
  EPX70906.1 589 ALVGPNGAGKTTLIRLILEKVQPTvGSVVHHHGLRLALFNQhMGDQLDMRLSAVDWLRTKFGnkpegemrriigrygltgksqvipmsqlsdgqrrrvl 687
                 689**************9988888676666666665555444888888887777777766667777777777777777777777777777777777777 PP

      AAA_30  82 .grarlepgtllivDEagmv.dtkqlaallkaaekagakv 119
                  +   +++ ++l+ DE   + d+++++al++a+++ +  v
  EPX70906.1 688 fAFLGMTQPHILLLDEPTNAlDIDTIDALADALNNFDGGV 727
                 7555566667777777555447777777777766655444 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0      0.38   1.9e+02       7      19 ..     274     286 ..     271     365 .. 0.82
   2 !   14.1   0.0   7.9e-05     0.041       3      41 ..     589     630 ..     588     692 .. 0.82

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.38
      AAA_33   7 lpGsGKstlaerl 19 
                 ++G+GKstl++ +
  EPX70906.1 274 PNGTGKSTLLHAI 286
                 68*******9876 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 7.9e-05
      AAA_33   3 llvGlpGsGKstlaerllkklg...avllssdtlrrrlfgtd 41 
                  lvG++G+GK+tl++ +l+k +   + ++    lr +lf+++
  EPX70906.1 589 ALVGPNGAGKTTLIRLILEKVQptvGSVVHHHGLRLALFNQH 630
                 68**************99998888888888888888888743 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0      0.19        99       8      20 ..     275     287 ..     270     361 .. 0.85
   2 !   11.8   0.0   0.00041      0.21       1      25 [.     587     616 ..     587     649 .. 0.75

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.19
      AAA_28   8 estGKTtlleaLa 20 
                  +tGK+tll a+a
  EPX70906.1 275 NGTGKSTLLHAIA 287
                 79********998 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 0.00041
      AAA_28   1 kivitGgestGKTtlleaLaar.....gyp 25 
                 +i+++G+ ++GKTtl++ + ++     g +
  EPX70906.1 587 RIALVGPNGAGKTTLIRLILEKvqptvGSV 616
                 79**************99887644444444 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0       1.4   7.4e+02      22      42 ..     269     289 ..     246     317 .. 0.73
   2 !   13.8   0.0   8.6e-05     0.044      19      44 ..     585     610 ..     572     618 .. 0.79

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 1.4
                 EEEEESTTSSHHHHHHHHHHH CS
        TsaE  22 ilLeGdLGaGKTtlvrglaka 42 
                   L  + G+GK+tl +++a +
  EPX70906.1 269 YGLIAPNGTGKSTLLHAIACG 289
                 56777789*******999876 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 8.6e-05
                 TEEEEEEESTTSSHHHHHHHHHHHTT CS
        TsaE  19 gdvilLeGdLGaGKTtlvrglakalg 44 
                 ++ i+L G+ GaGKTtl+r ++++++
  EPX70906.1 585 NSRIALVGPNGAGKTTLIRLILEKVQ 610
                 4579*****************99875 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0      0.52   2.7e+02       9      20 ..     276     287 ..     269     298 .. 0.81
   2 !   11.5   0.0   0.00047      0.24       1      23 [.     587     610 ..     587     622 .. 0.82

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.52
                 TSSHHHHHHHHH CS
    MMR_HSR1   9 NvGKStLinalt 20 
                  +GKStL+ a+ 
  EPX70906.1 276 GTGKSTLLHAIA 287
                 58******9994 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 0.00047
                 EEEEEESTTSSHHHHHHHHHTS.T CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltge.k 23 
                 ++a+vG   +GK+tLi+ ++++ +
  EPX70906.1 587 RIALVGPNGAGKTTLIRLILEKvQ 610
                 69*****************99843 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.021        11      35      55 ..     268     288 ..     253     372 .. 0.80
   2 ?   -2.2   0.1       5.2   2.7e+03      80     136 ..     478     522 ..     473     540 .. 0.45
   3 !    6.9   0.0     0.008       4.1      31      50 ..     583     602 ..     562     642 .. 0.92

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.021
      AAA_25  35 lallaGapgtGKttlaldlal 55 
                    l+++ gtGK+tl+  +a+
  EPX70906.1 268 RYGLIAPNGTGKSTLLHAIAC 288
                 55689**********998887 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 5.2
      AAA_25  80 EdsedelrrRlravgealrddarllvldlagveslpLfakdrggtl.ltadvdaleaa 136
                 E ++ +l++++r++ ++++  ++ l +++ ++            ++ ++a+v+a++++
  EPX70906.1 478 ERDA-QLAKKARQQEKDMAKLQNKLNMTGSDQ------------QKkAKAKVKAMDKR 522
                 5555.666666666666633333333332221............11122233333332 PP

  == domain 3  score: 6.9 bits;  conditional E-value: 0.008
      AAA_25  31 pagelallaGapgtGKttla 50 
                  +++ ++l+G+ g+GKttl 
  EPX70906.1 583 DLNSRIALVGPNGAGKTTLI 602
                 678899************95 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0      0.25   1.3e+02       5      20 ..     272     287 ..     268     290 .. 0.84
   2 !   11.1   0.1   0.00054      0.27       1      24 [.     587     610 ..     587     620 .. 0.88

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.25
                 E--TTSSHHHHHHHHH CS
    NTPase_1   5 TGppGvGKtTlvkkvl 20 
                  +p G+GK+Tl++ ++
  EPX70906.1 272 IAPNGTGKSTLLHAIA 287
                 5789*********987 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.00054
                 EEEEE--TTSSHHHHHHHHHHHH. CS
    NTPase_1   1 kvfiTGppGvGKtTlvkkvlellk 24 
                 ++++ Gp G GKtTl++ +le+++
  EPX70906.1 587 RIALVGPNGAGKTTLIRLILEKVQ 610
                 58999****************996 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0       2.1   1.1e+03       6      20 ..     273     287 ..     271     301 .. 0.87
   2 !    9.6   0.0    0.0016      0.83       3      30 ..     589     616 ..     587     633 .. 0.82
   3 ?    1.1   0.0      0.71   3.7e+02      49      91 ..     680     722 ..     658     724 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 2.1
                 --SSSSHHHHHHHGG CS
       AAA_5   6 GppGtgKselaerla 20 
                  p GtgKs+l   +a
  EPX70906.1 273 APNGTGKSTLLHAIA 287
                 589******987765 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.0016
                 EEE--SSSSHHHHHHHGGGGBS--EEEE CS
       AAA_5   3 lLvGppGtgKselaerlaaalnreveyv 30 
                  LvGp G gK++l++ +++ ++ +v  v
  EPX70906.1 589 ALVGPNGAGKTTLIRLILEKVQPTVGSV 616
                 59****************9987666555 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.71
                 ........--------G-SEEEEESGGG--.HHHHHHHHHHHHS CS
       AAA_5  49 ngttslvdsplvraaregeilvlDEverae.sevlnsLlsllee 91 
                 +g++++v  ++   +++++il+lDE ++a   +++++L   l++
  EPX70906.1 680 DGQRRRVLFAFL-GMTQPHILLLDEPTNALdIDTIDALADALNN 722
                 555666666666.6789********9999878999999998886 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.1      0.13        67       9      21 ..     275     287 ..     271     318 .. 0.88
   2 !    9.7   0.0    0.0015      0.76       2      24 ..     587     609 ..     586     632 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.13
                 TTTCHHHHHHHHH CS
       NACHT   9 aGsGKTtLlqkla 21 
                 +G GK+tLl+ +a
  EPX70906.1 275 NGTGKSTLLHAIA 287
                 8*********997 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.0015
                 CEEEEC-TTTCHHHHHHHHHHHH CS
       NACHT   2 lvilqGeaGsGKTtLlqklalaw 24 
                  ++l G++G GKTtL++ + ++ 
  EPX70906.1 587 RIALVGPNGAGKTTLIRLILEKV 609
                 5899************9998775 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.61   3.1e+02       5      21 ..     271     287 ..     268     297 .. 0.81
   2 !   11.5   0.0   0.00032      0.16       3      24 ..     588     609 ..     586     636 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.61
                 EEESTTCCHHHHHHHHH CS
        cobW   5 ltGflGsGKTtLlnhll 21 
                 l  + G+GK+tLl ++ 
  EPX70906.1 271 LIAPNGTGKSTLLHAIA 287
                 55678********9875 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 0.00032
                 EEEEESTTCCHHHHHHHHHCT- CS
        cobW   3 tvltGflGsGKTtLlnhllenr 24 
                 + l+G+ G+GKTtL++ +le+ 
  EPX70906.1 588 IALVGPNGAGKTTLIRLILEKV 609
                 5799************999654 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       2.9   1.5e+03      27      40 ..     273     286 ..     252     290 .. 0.82
   2 ?    3.9   0.1     0.049        25      61     148 ..     357     451 ..     330     497 .. 0.79
   3 ?   -0.4   0.1         1   5.3e+02      42      95 ..     460     519 ..     451     544 .. 0.67
   4 ?    9.2   0.0    0.0012      0.64      23      45 ..     588     610 ..     576     618 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 2.9
                 ESTTSSHHHHHHHH CS
      NB-ARC  27 GmgGvGKttlakqi 40 
                    G GK+tl++ i
  EPX70906.1 273 APNGTGKSTLLHAI 286
                 568*******9877 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.049
                 SXXHHHHHHHXXHHHHHCCCTTSSSS-STTS....HHHHHHHHCCCTTEEEEEEEE-SHHHH........HHHHCHTTSEEEEEESBCCCCCCS- CS
      NB-ARC  61 ktdkseeiletilkeLslseddleekeeves....lkrklvrlLltkrfllvlDDVweeedwdkigv...vlparenrlrvllTTRdeevanavs 148
                 +td+se+++ +ilk L+ +++ + + +e  s    +   l r+L  k +l++lD   ++ d++++      l  + ++  vl+T   ++  n+v 
  EPX70906.1 357 ETDNSEHLVYKILKGLQFTDEMIAKRTEDLSggwrMRIALARILFIKPTLMMLDEPTNHLDLEAVAYleeYLTHEMEGHTVLITCHTQDTLNEVC 451
                 578999*************999999998888999888899**************99999888887542225667777788888877766655554 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 1
                 CSHCCCCCCBTEEEEE.......EEESXXHHHHHHHXXHHHHHCCCTTSSSS-STTSHHHH CS
      NB-ARC  42 nksdevegrFdsvawv.......vvsktdkseeiletilkeLslseddleekeeveslkrk 95 
                 +k+d   g++d++  v          k  ++e+ + ++ ++L+ + +d+++k++ +  k +
  EPX70906.1 460 HKLDYYSGNYDVFLKVrgerdaqLAKKARQQEKDMAKLQNKLNMTGSDQQKKAKAK-VKAM 519
                 66677788888888888888884444455666677778888888888888777666.3333 PP

  == domain 4  score: 9.2 bits;  conditional E-value: 0.0012
                 EEEEESTTSSHHHHHHHHCCSHC CS
      NB-ARC  23 valvGmgGvGKttlakqilnksd 45 
                 +alvG  G GKttl++ il+k +
  EPX70906.1 588 IALVGPNGAGKTTLIRLILEKVQ 610
                 89****************99965 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4  14.9      0.36   1.9e+02       1     194 [.     245     525 ..     245     545 .. 0.60
   2 ?   16.1   0.2   2.3e-05     0.012      18      39 ..     585     605 ..     571     606 .. 0.75
   3 ?    0.6   0.3       1.4     7e+02     147     189 ..     748     786 ..     700     791 .] 0.55

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.36
      AAA_23   1 kLkienfrsf..rdqeidF.skgltlItGpNGaGKTTildAiklaLygetprlsrksgrgfeksdveiesegkvkayveltfenkdgrytrsiererel 96 
                 kL+++ ++++  +d e+ + +   + ++ pNG+GK+T+l Ai  +    ++ l    +  + ++++     g+  ++ve  + ++++      +++++l
  EPX70906.1 245 KLSVSAYGKHliKDSELSLiNGRRYGLIAPNGTGKSTLLHAIACGQIPAPQSL----DFYLLDREYM----GNSLTCVEAVL-DINE------QERKHL 328
                 57777788888888888887667788999*************76555433322....2245566666....34455555555.2222......233334 PP

      AAA_23  97 skkkgkttkkaklelleideleqfisellgskkiilnlilflgqerfeefelkdkke.......................................... 153
                    +++  ++ +++ +e d+ + +++el + + + l + +++g + ++e+  k++++                                          
  EPX70906.1 329 ETIMEDLLDDPDKNAVELDTIQTRLTELETDNSEHLVYKILKGLQFTDEMIAKRTEDlsggwrmrialarilfikptlmmldeptnhldleavayleey 427
                 444444444444444445444444444333333333333333333333333333333444444444444444444555555555555556666666666 PP

      AAA_23 154 ...................................................rleel.ekeleeledekkllekl.....eqekekekeleeleeelee 194
                                                                    r ++l +k+ ++++d++kl++kl      q+k+ +++ ++  ++le+
  EPX70906.1 428 lthemeghtvlitchtqdtlnevctdiihlhhhkldyysgnydvflkvrgeRDAQLaKKARQQEKDMAKLQNKLnmtgsDQQKKAKAKVKAMDKRLEK 525
                 66777777777777777788888888888999988999999999999998855555255566666777777777888886777777777777777765 PP

  == domain 2  score: 16.1 bits;  conditional E-value: 2.3e-05
      AAA_23  18 skgltlItGpNGaGKTTildAi 39 
                 ++ + +++GpNGaGKTT+++ i
  EPX70906.1 585 NSRI-ALVGPNGAGKTTLIRLI 605
                 4444.89************877 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 1.4
      AAA_23 147 elkdkke...rleelekeleeledekkllekleqekekekeleele 189
                 ++++ ke   ++++++  l+e+ +++++ ek+       +el + +
  EPX70906.1 748 KDNTVKEfdgEIRDYKMMLKEQIAKDRENEKE-------AELAKQK 786
                 33333333335555555555554444444444.......2222222 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0       0.5   2.6e+02     131     149 ..     269     286 ..     231     296 .. 0.63
   2 ?   -2.9   0.1       5.4   2.7e+03     222     236 ..     433     446 ..     420     450 .. 0.86
   3 ?   10.6   0.0   0.00041      0.21      25     156 ..     473     612 ..     463     618 .. 0.78

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.5
       T2SSE 131 lilvsGgTgsGKttllyal 149
                   l++ + g+GK+tll a+
  EPX70906.1 269 YGLIA-PNGTGKSTLLHAI 286
                 44443.88********876 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 5.4
       T2SSE 222 TGHlgslsTlHansa 236
                  GH + l T H++++
  EPX70906.1 433 EGHTV-LITCHTQDT 446
                 59***.******986 PP

  == domain 3  score: 10.6 bits;  conditional E-value: 0.00041
       T2SSE  25 vkvrervdgielreveelekaalerlisriaalakld...iseerplqdarlpekgvrlrvvllPvvagealviR......kksakeltlddlgaeeal 114
                 +kvr   d  +l++ ++ +++ ++ l +++ ++ + +    + + + +d rl++++ + +v+   ++++++lviR         + +++++d++++   
  EPX70906.1 473 LKVRGERDA-QLAKKARQQEKDMAKLQNKLNMTGSDQqkkAKAKVKAMDKRLEKDKQSGKVLDEEIIQEKQLVIRfqecggGIPSPAVKFQDVSFNYPE 570
                 567667777.777777777777888888887775544000455556778899999999999999999999*****8544432234567999****9999 PP

       T2SSE 115 kekiaevlrkavrerglilvsGgTgsGKttllyallkeinks 156
                  ++i + l+  +  +  i + G+ g GKttl+  +l++++ +
  EPX70906.1 571 GPTIFSNLNFGLDLNSRIALVGPNGAGKTTLIRLILEKVQPT 612
                 9***********************************999865 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.057        29      12      75 ..     276     351 ..     267     373 .. 0.71
   2 ?    6.2   0.0      0.02        10       5      26 ..     588     609 ..     585     637 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.057
      AAA_14  12 rvGKTtllkqlikellvkkesilyinldderd.............kkladpe.kllelilek.lkeekktylflDEiqe 75 
                  +GK+tll+ ++  ++ ++ + l + l d ++                +++e k le i+e  l +++k+ + lD iq 
  EPX70906.1 276 GTGKSTLLHAIACGQI-PAPQSLDFYLLDREYmgnsltcveavldI--NEQErKHLETIMEDlLDDPDKNAVELDTIQT 351
                 68*********99999.65666666555555546677777665431..2222356667777645557888899999985 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.02
      AAA_14   5 lvitGaRrvGKTtllkqlikel 26 
                 ++++G+  +GKTtl++ ++++ 
  EPX70906.1 588 IALVGPNGAGKTTLIRLILEKV 609
                 6899***********9998765 PP

>> DUF3584  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   5.4      0.14        74     347     467 ..     415     537 ..     410     550 .. 0.59
   2 ?   12.0   0.1   5.3e-05     0.027      14      37 ..     582     605 ..     580     605 .. 0.95
   3 ?   -4.1   0.4       3.9     2e+03     789     825 ..     752     787 ..     748     789 .. 0.64

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.14
     DUF3584 347 kadldqlpsirselee.leeeldaltekhqdvqekydrrkqkikeeleeeleklkerleaireekdrl....kaaieealealesqlrkqleaqkeeln 440
                 + dl+++  +++ l++ +e +  ++t + qd  ++  +++  +++++ +  +++ +   ++r e+d++      ++e+++ +l+++l+     q+++++
  EPX70906.1 415 HLDLEAVAYLEEYLTHeMEGHTVLITCHTQDTLNEVCTDIIHLHHHKLDYYSGNYDVFLKVRGERDAQlakkARQQEKDMAKLQNKLNMTGSDQQKKAK 513
                 666677666666665404444444555667788888888888888888888888888777777777776654445566677777777755555555555 PP

     DUF3584 441 eeekelesrlselklrldsatateEel 467
                  + k + +rl++ k+   s ++ +Ee 
  EPX70906.1 514 AKVKAMDKRLEKDKQ---SGKVLDEEI 537
                 555555555555443...333334444 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 5.3e-05
     DUF3584  14 ldldghtnieGtNaaGKTtLlrLi 37 
                 ldl+ +  ++G N+aGKTtL+rLi
  EPX70906.1 582 LDLNSRIALVGPNGAGKTTLIRLI 605
                 89999******************8 PP

  == domain 3  score: -4.1 bits;  conditional E-value: 3.9
     DUF3584 789 iekrreevreYraflqetwlkvdslaeerpalkeqve 825
                 ++++  e+r+Y+  l+e+ +k d   e+ ++l++q++
  EPX70906.1 752 VKEFDGEIRDYKMMLKEQIAK-DRENEKEAELAKQKS 787
                 556666777777777777766.666666666666655 PP

>> KapB  Kinase associated protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.1   6.1e-05     0.031      54      91 ..     742     779 ..     728     791 .] 0.78

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 6.1e-05
        KapB  54 kEktnvpkeavkpyegevpdYeeSlkealeklkekLke 91 
                 +E  +v+ ++vk+++ge+ dY+  lke ++k +e+ ke
  EPX70906.1 742 EEIWVVKDNTVKEFDGEIRDYKMMLKEQIAKDRENEKE 779
                 56778999*******************99988776433 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0      0.34   1.8e+02       5      19 ..     273     287 ..     270     382 .. 0.77
   2 ?   -0.8   0.1         4   2.1e+03      42      80 ..     480     520 ..     423     533 .. 0.70
   3 ?   14.8   0.0   6.3e-05     0.032       1      66 [.     588     651 ..     588     677 .. 0.81
   4 ?    1.0   0.1       1.1   5.7e+02      49     115 ..     705     780 ..     694     789 .. 0.75

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.34
      AAA_18   5 GtpGvGKttlakeLs 19 
                  + G+GK+tl ++++
  EPX70906.1 273 APNGTGKSTLLHAIA 287
                 578*******99884 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 4
      AAA_18  42 dpealdeskrldedkldklldaleenss...aleegknlvid 80 
                 d+ +l ++ r +e+ ++kl+++l+   s   + +++k+  +d
  EPX70906.1 480 DA-QLAKKARQQEKDMAKLQNKLNMTGSdqqKKAKAKVKAMD 520
                 22.466777777777888888887776655544455544555 PP

  == domain 3  score: 14.8 bits;  conditional E-value: 6.3e-05
      AAA_18   1 IlltGtpGvGKttlakeLskrlgfgvnlrdvakenglllevdpealdeskrldedkldklldalee 66 
                 I+l G+ G+GKttl + + ++      +++v+ ++gl+l  +++   +++ ++   +d l +++ +
  EPX70906.1 588 IALVGPNGAGKTTLIRLILEKV--QPTVGSVVHHHGLRLALFNQHMGDQLDMRLSAVDWLRTKFGN 651
                 89****************9997..999**********99999995555555555555555555555 PP

  == domain 4  score: 1.0 bits;  conditional E-value: 1.1
      AAA_18  49 skrldedkldklldaleenss............aleegknlvidghlaeleseaakdikkvvLtaspeelleRlekRgy 115
                 ++ ld+d  d+l dal++ +             ++  ++ +v+ +  ++ ++ + +d+k   + +++++ ++R ++ + 
  EPX70906.1 705 TNALDIDTIDALADALNNFDGgvvfithdfrliDQVAEEIWVVKDNTVKEFDGEIRDYK---MMLKEQIAKDRENEKEA 780
                 56788888888888888888888888888888888888888999999999999999888...55555555555555555 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.071        36      28      43 ..     271     286 ..     254     288 .. 0.79
   2 ?   -2.1   0.1       4.8   2.5e+03     211     265 ..     321     369 ..     309     386 .. 0.74
   3 ?    3.4   0.2     0.098        50     195     268 ..     467     537 ..     394     562 .. 0.66
   4 ?   10.4   0.2   0.00076      0.39      17      43 ..     580     605 ..     576     608 .. 0.88
   5 ?    6.2   0.0     0.014       7.1     273     364 ..     648     732 ..     628     737 .. 0.73

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.071
      AAA_15  28 liGkNnsGKSsileal 43 
                 li +N++GKS++l+a+
  EPX70906.1 271 LIAPNGTGKSTLLHAI 286
                 6778***********9 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 4.8
      AAA_15 211 sekkssllgklkekileealqekleeelteklkeiqeklkeidkklaeelkkilk 265
                 +e++++ l++++e++l++       +++  +l+ iq+ l+e++ + +e+l +++ 
  EPX70906.1 321 NEQERKHLETIMEDLLDD------PDKNAVELDTIQTRLTELETDNSEHLVYKIL 369
                 566667777777777777......7888888888899888888887777765443 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.098
      AAA_15 195 iklllisakRnvsdedsekkssllgklkekileealqekleeelteklkeiqeklkeidkklaeelk..kilkkki 268
                   ++++ ++R   d +  kk    +k + k+       kl+    ++ k+ + k+k +dk l+++++  k+l++ i
  EPX70906.1 467 GNYDVFLKVRGERDAQLAKKARQQEKDMAKLQN-----KLNMTGSDQQKKAKAKVKAMDKRLEKDKQsgKVLDEEI 537
                 556666666666664444333333333333322.....23444455666667777777777766666554333333 PP

  == domain 4  score: 10.4 bits;  conditional E-value: 0.00076
      AAA_15  17 veidlseeltvliGkNnsGKSsileal 43 
                 + +dl++    l+G+N++GK+++++++
  EPX70906.1 580 FGLDLNS-RIALVGPNGAGKTTLIRLI 605
                 5578888.899*************988 PP

  == domain 5  score: 6.2 bits;  conditional E-value: 0.014
      AAA_15 273 kfnykgkkneeieik......ddeelplnknGsGvqrllllillileaekkdekeeknvilliEEPEahLHpqaqkvlikllkelandnktQviitTH 364
                 kf++k++ +  + i         + +p+++ ++G++r +l+++l     +       ++ill++EP + L        i++l++++n+ ++ v++ TH
  EPX70906.1 648 KFGNKPEGEMRRIIGrygltgKSQVIPMSQLSDGQRRRVLFAFLGMT--Q-------PHILLLDEPTNAL----DIDTIDALADALNNFDGGVVFITH 732
                 5666777777777779999999999*****************99753..3.......5889999998765....444566666666666666666666 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00058       0.3      48      95 ..     275     322 ..     270     365 .. 0.84
   2 ?   -0.8   0.0       1.6     8e+02      41      58 ..     587     604 ..     568     607 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00058
                   TTSSHHHHHHHHHHHHHTT--TTTEEEEEE-TTSS..SCGGGTT-TTBSS CS
  FtsK_SpoIIIE  48 tgsGKStalntLilSlatthtPeeVqliliDykgv..elsalediphlls 95 
                    g+GKSt l+++ ++ +   +P+ + ++l+D   +   l+ +e + ++ +
    EPX70906.1 275 NGTGKSTLLHAIACGQIP--APQSLDFYLLDREYMgnSLTCVEAVLDINE 322
                   599***************..***********8766566766666666555 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 1.6
                   SEEEE--TTSSHHHHHHH CS
  FtsK_SpoIIIE  41 hllvaGatgsGKStalnt 58 
                    + ++G  g GK+t ++ 
    EPX70906.1 587 RIALVGPNGAGKTTLIRL 604
                   57899*********9875 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.62   3.2e+02      32      52 ..     265     285 ..     258     298 .. 0.78
   2 ?    9.6   0.0    0.0012      0.59      31      59 ..     583     611 ..     559     619 .. 0.87

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.62
       AAA_7  32 nkkpvllvGptGtGKtviikd 52 
                 n++   l+ p GtGK+++++ 
  EPX70906.1 265 NGRRYGLIAPNGTGKSTLLHA 285
                 566677899********9886 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.0012
       AAA_7  31 knkkpvllvGptGtGKtviikdllkkldk 59 
                 + +  + lvGp G GKt++i+ +l+k+++
  EPX70906.1 583 DLNSRIALVGPNGAGKTTLIRLILEKVQP 611
                 5577899***************9999875 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0      0.08        41      52      84 ..     271     303 ..     260     338 .. 0.79
   2 ?   -0.7   0.0       2.1   1.1e+03     106     148 ..     401     442 ..     389     453 .. 0.84
   3 ?    4.5   0.0      0.05        26      47      63 ..     585     601 ..     575     619 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.08
   IstB_IS21  52 llGpsGvGKshlaialgveavraglsvlfvrve 84 
                 l+ p G+GKs l  a++   + a  s  f+ ++
  EPX70906.1 271 LIAPNGTGKSTLLHAIACGQIPAPQSLDFYLLD 303
                 788*********999999888887777776554 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 2.1
   IstB_IS21 106 llkvdllilDdlgllpldqaeaellfeviekryerrsiiitsn 148
                 ++k++l++lD+  +++ld ++ ++l e + +  e ++++it  
  EPX70906.1 401 FIKPTLMMLDEP-TNHLDLEAVAYLEEYLTHEMEGHTVLITCH 442
                 578999***996.5789999*****************999976 PP

  == domain 3  score: 4.5 bits;  conditional E-value: 0.05
   IstB_IS21  47 kenivllGpsGvGKshl 63 
                 +  i+l+Gp G+GK+ l
  EPX70906.1 585 NSRIALVGPNGAGKTTL 601
                 6779***********87 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0      0.28   1.4e+02       5      19 ..     273     287 ..     270     350 .. 0.81
   2 ?    7.5   0.0      0.01       5.3       1      23 [.     588     610 ..     588     628 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.28
  RNA_helicase   5 GpsgeGKStlakeLa 19 
                    p+g+GKStl + +a
    EPX70906.1 273 APNGTGKSTLLHAIA 287
                   588*******99954 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.01
  RNA_helicase   1 iwlyGpsgeGKStlakeLakall 23 
                   i l+Gp+g GK+tl++ + ++++
    EPX70906.1 588 IALVGPNGAGKTTLIRLILEKVQ 610
                   5689************9888876 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0      0.19        98      11      30 ..     267     286 ..     261     292 .. 0.83
   2 ?    6.7   0.1     0.016       8.3      12      36 ..     587     611 ..     583     779 .. 0.90

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.19
      AAA_19  11 kvllvtaGpGtGKTrvlkhi 30 
                 +   ++a+ GtGK+++l++i
  EPX70906.1 267 RRYGLIAPNGTGKSTLLHAI 286
                 56679*********999876 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.016
      AAA_19  12 vllvtaGpGtGKTrvlkhivallve 36 
                  ++++++ G GKT++++ i++ ++ 
  EPX70906.1 587 RIALVGPNGAGKTTLIRLILEKVQP 611
                 57899************99998765 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.031        16       2      22 ..     266     286 ..     265     351 .. 0.77
   2 ?   10.4   0.0   0.00077      0.39       3      22 ..     586     605 ..     584     613 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.031
      AAA_24   2 klkiliyGpsgiGKTtlakel 22 
                 ++++ +++p+g+GK+tl+  +
  EPX70906.1 266 GRRYGLIAPNGTGKSTLLHAI 286
                 578899***********9877 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00077
      AAA_24   3 lkiliyGpsgiGKTtlakel 22 
                  +i+++Gp+g+GKTtl++ +
  EPX70906.1 586 SRIALVGPNGAGKTTLIRLI 605
                 69**************9876 PP

>> AAA_27  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00061      0.31       2      47 ..     242     287 ..     241     358 .. 0.91
   2 ?    5.3   0.0     0.026        13      30      46 ..     589     605 ..     572     609 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00061
      AAA_27   2 rlerLdLeryGk..ftdrsldfsaeeadlhliyGpNEAGKstalrAis 47 
                 ++e+L++++yGk  ++d++l++  + ++  li  pN +GKst+l+Ai 
  EPX70906.1 242 QVEKLSVSAYGKhlIKDSELSLI-NGRRYGLIA-PNGTGKSTLLHAIA 287
                 5799*******96679******9.688899986.************95 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.026
      AAA_27  30 liyGpNEAGKstalrAi 46 
                  ++GpN AGK+t++r i
  EPX70906.1 589 ALVGPNGAGKTTLIRLI 605
                 468*********98865 PP

>> SbcCD_C  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1       4.8   2.5e+03      21      42 ..      43      64 ..      33      67 .. 0.68
   2 ?    4.2   0.0     0.098        50      63      88 ..     403     428 ..     375     430 .. 0.87
   3 ?    5.4   0.1     0.041        21      63      89 ..     695     721 ..     675     722 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 4.8
     SbcCD_C 21 gkekelsrssgtlSGGekqfla 42
                + e+ l+++s ++S Ge ++ +
  EPX70906.1 43 KMETVLDDESDSNSDGEEEKSV 64
                3334489999999999998766 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.098
     SbcCD_C  63 alrlvfLDEAFsklDeesiatllell 88 
                 ++ l++LDE  + lD e +a l e+l
  EPX70906.1 403 KPTLMMLDEPTNHLDLEAVAYLEEYL 428
                 5789***********99999887776 PP

  == domain 3  score: 5.4 bits;  conditional E-value: 0.041
     SbcCD_C  63 alrlvfLDEAFsklDeesiatllelle 89 
                 ++ +++LDE  + lD ++i++l ++l+
  EPX70906.1 695 QPHILLLDEPTNALDIDTIDALADALN 721
                 6889*****************999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (791 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2988  (0.166657); expected 358.6 (0.02)
Passed bias filter:                      773  (0.0431145); expected 358.6 (0.02)
Passed Vit filter:                       243  (0.0135535); expected 17.9 (0.001)
Passed Fwd filter:                        98  (0.005466); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              35  [number of targets reported over threshold]
# CPU time: 1.65u 0.38s 00:00:02.02 Elapsed: 00:00:00.59
# Mc/sec: 4039.24
//
Query:       EPX70907.1  [L=491]
Description: glucosidase II Gtb1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.3e-65  219.6   8.6    2.3e-65  219.6   8.6    2.1  2  PRKCSH-like      Glucosidase II beta subunit-like
    1.8e-50  170.6   1.5    1.8e-50  170.6   1.5    2.1  2  PRKCSH_1         Glucosidase II beta subunit-like protein
     0.0037   17.5  18.9      0.051   13.8   9.0    2.9  2  Ldl_recept_a     Low-density lipoprotein receptor domain clas
  ------ inclusion threshold ------
      0.045   13.2   5.9      0.075   12.4   2.7    2.1  2  HBM              Helical bimodular sensor domain
       0.13   12.2   0.0       0.31   11.0   0.0    1.5  1  ACT_3            ACT domain
        2.4    8.7   7.9        7.6    7.1   0.2    3.1  2  Cep57_MT_bd      Centrosome microtubule-binding domain of Cep
        5.3    5.5  14.7        1.9    7.0   4.0    2.6  3  FapA             Flagellar Assembly Protein A
        6.4    7.3  10.4       0.78   10.2   0.1    3.4  3  Snapin_Pallidin  Snapin/Pallidin
        8.2    6.3  10.2         85    3.0   8.5    2.6  2  FTA4             Kinetochore complex Fta4 of Sim4 subunit, or


Domain annotation for each model (and alignments):
>> PRKCSH-like  Glucosidase II beta subunit-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  219.6   8.6   1.2e-68   2.3e-65       5     172 ..      12     176 ..       8     182 .. 0.93
   2 ?   -0.4   0.3      0.42   8.4e+02     126     169 ..     241     282 ..     219     289 .. 0.72

  Alignments for each domain:
  == domain 1  score: 219.6 bits;  conditional E-value: 1.2e-68
  PRKCSH-like   5 llaisll.vasavdelrGvapdklelykPdengnwkclnsseiklsfdqvnddycdcPdGsdePGtsacengkfycaneGyisgyiesfkvddgvcdy 101
                  l++i l+  ++a+ ++rG++ ++l+lykPd ng+wkcl+s++  ++f+q+nddycdcPdGsdePGtsac+ngkf+c+n+Gyis+yi+s+ vdd+ cd 
   EPX70907.1  12 LFSILLIpFVNAKLSIRGISENELHLYKPDSNGKWKCLGSEKT-INFEQINDDYCDCPDGSDEPGTSACKNGKFFCKNDGYISKYIPSNWVDDTKCD- 107
                  554444414688999***************************9.*****************************************************. PP

  PRKCSH-like 102 diccdGsdeelgkcenkcaeiarkfeelleeankkvkkglkikeelllaakkkldelkkklkeledslkak 172
                    ccdGsde+l+kcen+c+e a+k+++ l+e+n+ v  gl+i+++++++++k ++e  +k++ + +++   
   EPX70907.1 108 --CCDGSDESLVKCENTCKEEAKKYKRSLDEHNQLVTDGLRIRDDWIAQSAKLKEETLNKYNSVTSKIAEL 176
                  ..************************************************************999998754 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.42
  PRKCSH-like 126 feelleeankkvkkglkikeelllaakkkldelkkklkeledsl 169
                  +e  +e+ ++++k++++  e++  +  kk+    k +++l++s+
   EPX70907.1 241 YE--TEDFEATIKEAMDSWEDIRSQNVKKKVTSDKIHDDLKSSV 282
                  43..4567889999999999999888888777777777777665 PP

>> PRKCSH_1  Glucosidase II beta subunit-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.1       1.3   2.7e+03      32      35 ..     257     260 ..     202     309 .. 0.57
   2 !  170.6   1.5   8.9e-54   1.8e-50       2     142 ..     344     485 ..     343     491 .] 0.95

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 1.3
                 X.XX CS
    PRKCSH_1  32 ldDi 35 
                 ++Di
  EPX70907.1 257 WEDI 260
                 4444 PP

  == domain 2  score: 170.6 bits;  conditional E-value: 8.9e-54
                 XXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXX.XX-TTTTT-EEEEEETTEEEEEETTSEEEETTEEEEEEEEEETTEEEEEE-SB-TTSSC-EEEEEE CS
    PRKCSH_1   2 ekeldeaeedikkieseltklkeeles.eyGldDiyRalegrevkekigdYeYkvvllesvvqddisiGefkkqegnklkyekGakCWnGPvRsaivev 99 
                 + el  +e++ +++++e+ +l e+l++ +y +d++yR l+g++++  +gdY Yk+v++e+v+q++i +G+f +q gn+l y +G++CWnGP Rs  v+v
  EPX70907.1 344 QSELSVTEDELEELQKEQVILLEDLQEhHYSWDNLYRFLKGMTTELTVGDYVYKIVFFENVLQNSINLGNFVEQKGNTLRYSNGQSCWNGPDRSTKVVV 442
                 67788899***************99652789******************************************************************** PP

                 EE-SS-EEEEEEEEETTEEEEEEEEGGG--XXXXXXXXXXXXX CS
    PRKCSH_1 100 eCGdenelvsvseaekCeYllkvkspaaCsnvllkkslaeees 142
                 eCG+ene+vsv+ea+kCeY++k+kspaaCs+++++ sl+e++ 
  EPX70907.1 443 ECGTENEIVSVLEAQKCEYTIKMKSPAACSTSQFQASLLENDY 485
                 ***************************************9975 PP

>> Ldl_recept_a  Low-density lipoprotein receptor domain class A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   2.3    0.0015         3       8      35 ..      46      74 ..      42      76 .. 0.74
   2 !   13.8   9.0   2.6e-05     0.051       2      37 .]      78     119 ..      77     119 .. 0.88

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0015
                  EEETTSE.EEEGGGTTSSSTTSSSSGCCS CS
  Ldl_recept_a  8 fqCgsge.CIprswvCdgeaDCeDgSDEe 35
                   +C ++e  I+ +   d+  DC DgSDE 
    EPX70907.1 46 WKCLGSEkTINFEQINDDYCDCPDGSDEP 74
                  56666655677777778899********5 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 2.6e-05
                   SSSSSCEEETTSE....EEEGGGTTSSSTTSSSSGCC..SST CS
  Ldl_recept_a   2 tCepnefqCgsge....CIprswvCdgeaDCeDgSDE..enC 37 
                    C++ +f C++       Ip++wv d + DC DgSDE   +C
    EPX70907.1  78 ACKNGKFFCKNDGyiskYIPSNWVDDTKCDCCDGSDEslVKC 119
                   7********9976566699******************87777 PP

>> HBM  Helical bimodular sensor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.1     0.098   1.9e+02      78     113 ..     125     160 ..     118     169 .. 0.78
   2 ?   12.4   2.7   3.8e-05     0.075      14     153 ..     170     313 ..     163     315 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.098
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         HBM  78 alvqeyrksfnelraayesrnaaRqeldsaaerale 113
                 + +++y++s++e ++ +     +R  +++++++++e
  EPX70907.1 125 EEAKKYKRSLDEHNQLVTDGLRIRDDWIAQSAKLKE 160
                 567788888888888888888888888888777665 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 3.8e-05
                 HHHHHHHHHHHHHHHHHHHHHHHTTT-HHHHHHHHHHHHHHHHHHHHHHH--S.HHHHHHHHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         HBM  14 lseisqLndllkdLRiaRlqyelsngdataaavqkkldelkaqlqklkakfks.penvrlLqeqlalvq...eyrksfnelraayesrnaaRqeldsaa 108
                 +s+i++L ++ +dL  +    +ls ++++   + + l+e+k  l +l ++ ++  e +  L++ l+ ++   e ++  + +++a++s +++R++ +++ 
  EPX70907.1 170 TSKIAELEKTKQDLQNTVKAIKLSSDSDSRSILANDLEEIKIDLYNLLDERNEyTERLNALENLLDEISlmyETEDFEATIKEAMDSWEDIRSQNVKKK 268
                 5899**********999999999999888888*********9999999887662566777888877776311344455789****************** PP

                 HHHHHHHHHHHHHHHCS-S-HHHHHHHHHHHHHHHHHHHHHHHHH CS
         HBM 109 eraleaideleaevlqtpeadserlaqlqaiaelkrqvqlaryqv 153
                  ++++  d l+++v+ ++   +e+++ +  +++++++++++ ++v
  EPX70907.1 269 VTSDKIHDDLKSSVTHLARIAKEEVTYFGFLKKIEKDFMEVYWNV 313
                 ***************************************998777 PP

>> ACT_3  ACT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00016      0.31       5      51 ..     377     422 ..     375     425 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00016
                 HHHHHCST-EEEE-SS-EEEEEE-S-GGGGGGG--SEEEEETTEEEE CS
       ACT_3   5 dLskLLasltpelhpgeYVFctlpdaladlekleplalfrEaEGlTl 51 
                 +L + L+++t+el  g+YV+  +  + + l+++  l  f E+ G Tl
  EPX70907.1 377 NLYRFLKGMTTELTVGDYVYKIVFFE-NVLQNSINLGNFVEQKGNTL 422
                 78999***************999866.57888889999999999886 PP

>> Cep57_MT_bd  Centrosome microtubule-binding domain of Cep57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.2    0.0038       7.6      25      60 ..     174     209 ..     170     213 .. 0.90
   2 ?    4.4   0.7     0.026        52      20      44 ..     350     374 ..     343     380 .. 0.87

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0038
  Cep57_MT_bd  25 ehlklelqelaaqynaldpslgkrkRkdLaeeleel 60 
                  ++l +  q+l+ + +a   s+++ +R +La++lee+
   EPX70907.1 174 AELEKTKQDLQNTVKAIKLSSDSDSRSILANDLEEI 209
                  6788889999***********************986 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.026
  Cep57_MT_bd  20 LedEfehlklelqelaaqynaldps 44 
                   edE+e+l++e   l + ++++  s
   EPX70907.1 350 TEDELEELQKEQVILLEDLQEHHYS 374
                  69******************99866 PP

>> FapA  Flagellar Assembly Protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   2.0    0.0012       2.3     317     410 ..      97     189 ..      81     198 .. 0.74
   2 ?    7.0   4.0   0.00094       1.9     309     426 ..     185     297 ..     183     315 .. 0.69
   3 ?   -2.1   0.0      0.55   1.1e+03     383     410 ..     343     370 ..     332     398 .. 0.61

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0012
        FapA 317 Gselgtkteiev..gldepelkeklkeleeeleeleeeleklkkkikklpklkaekqlesekkeqlkklletkeklkeeleeleeelkelkeeles 410
                  s+ +  t+  +  g d  +l +  + ++ee ++++++l+++++ ++    ++ ++   ++  +  +++l+++++ +++++ele+ +++l++ ++ 
  EPX70907.1  97 PSNWVDDTKCDCcdGSD-ESLVKCENTCKEEAKKYKRSLDEHNQLVTDGLRIRDDWI--AQSAKLKEETLNKYNSVTSKIAELEKTKQDLQNTVKA 189
                 55556666666665666.555555599999999999999999999554444455554..666677789999999999********99999999875 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.00094
        FapA 309 kevkakklGselgtkteievgldepelkeklkeleeeleeleeeleklkkkikklpklkaekqlesekkeqlkklletkeklkeeleeleeelkelkee 407
                 ++vka kl s+++++  +   l+  e+k  l +l +e +e+ e+l+ l++ +++++ + ++++    ++ ++k++  + e ++++  + +   +++ + 
  EPX70907.1 185 NTVKAIKLSSDSDSRSILANDLE--EIKIDLYNLLDERNEYTERLNALENLLDEISLMYETED----FEATIKEAMDSWEDIRSQNVKKKVTSDKIHDD 277
                 78889999886666666665555..999999********************999999887665....55555555555555555555555555555555 PP

        FapA 408 lesk.keeakikvnkeiypg 426
                 l+s+ +  a+i+ ++  y g
  EPX70907.1 278 LKSSvTHLARIAKEEVTYFG 297
                 55552222466666666655 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 0.55
        FapA 383 lletkeklkeeleeleeelkelkeeles 410
                 ++ ++   ++eleel++e+  l e l++
  EPX70907.1 343 VQSELSVTEDELEELQKEQVILLEDLQE 370
                 3333344444444444444444444444 PP

>> Snapin_Pallidin  Snapin/Pallidin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.5      0.22   4.5e+02      16      37 ..     167     188 ..     154     196 .. 0.71
   2 ?   -0.1   0.7      0.66   1.3e+03      11      51 ..     202     242 ..     199     289 .. 0.60
   3 ?   10.2   0.1   0.00039      0.78       9      51 ..     341     383 ..     338     408 .. 0.78

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.22
  Snapin_Pallidin  16 deldeklkelrqsQeeLleqld 37 
                      + +++k++el+++ ++L+++++
       EPX70907.1 167 NSVTSKIAELEKTKQDLQNTVK 188
                      4567777777777777777775 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.66
  Snapin_Pallidin  11 lepkldeldeklkelrqsQeeLleqldrlnekLkeleeaqe 51 
                      l  +l+e++  l +l ++ +e +e+l+ l + L+e++ + e
       EPX70907.1 202 LANDLEEIKIDLYNLLDERNEYTERLNALENLLDEISLMYE 242
                      55566666666666666666666666666666666654444 PP

  == domain 3  score: 10.2 bits;  conditional E-value: 0.00039
  Snapin_Pallidin   9 ellepkldeldeklkelrqsQeeLleqldrlnekLkeleeaqe 51 
                      e ++++l  ++++l+el+++Q  Lle+l++ + + ++l +  +
       EPX70907.1 341 ENVQSELSVTEDELEELQKEQVILLEDLQEHHYSWDNLYRFLK 383
                      6678899999*******************99988777766665 PP

>> FTA4  Kinetochore complex Fta4 of Sim4 subunit, or CENP-50
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   8.5     0.042        85      99     167 ..     160     244 ..      27     290 .. 0.75
   2 ?   -2.1   0.0       1.6   3.1e+03     171     190 ..     341     359 ..     309     370 .. 0.74

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.042
        FTA4  99 k.........eelIkeLPeswe.........veekeaeeepleallerYaelrarLielserrqqlqarlarlrklkallepflgse 167
                 +          + I+eL ++++         +  ++++++    l ++ +e++ +L +l ++r++ ++rl+ l++l  +++ + ++e
  EPX70907.1 160 EetlnkynsvTSKIAELEKTKQdlqntvkaiKLSSDSDSR--SILANDLEEIKIDLYNLLDERNEYTERLNALENLLDEISLMYETE 244
                 1333334444788888888888777777655222233333..445588888999999999999999999999888888888776663 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.6
        FTA4 171 esvqenlvtrdgeleaEler 190
                 e+vq++l + ++ele El++
  EPX70907.1 341 ENVQSELSVTEDELE-ELQK 359
                 566666666666665.3333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (491 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1811  (0.10101); expected 358.6 (0.02)
Passed bias filter:                      577  (0.0321825); expected 358.6 (0.02)
Passed Vit filter:                        76  (0.00423894); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.65u 0.31s 00:00:00.96 Elapsed: 00:00:00.46
# Mc/sec: 3233.24
//
Query:       EPX70908.1  [L=287]
Description: SNARE Psy1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.1e-30  104.2  17.1    9.9e-30  103.7  17.1    1.2  1  Syntaxin      Syntaxin
    1.4e-13   50.6   0.3    1.4e-13   50.6   0.3    2.1  2  SNARE         SNARE domain
     0.0032   17.8   1.0        4.7    7.6   0.1    3.1  3  BLOC1_2       Biogenesis of lysosome-related organelles compl
     0.0095   16.4   5.5       0.22   12.0   0.8    2.5  2  NPV_P10       Nucleopolyhedrovirus P10 protein
  ------ inclusion threshold ------
      0.017   14.7   4.0       0.02   14.4   0.8    2.0  2  Allexi_40kDa  Allexivirus 40kDa protein
      0.019   14.8   6.5      0.025   14.4   0.9    2.4  2  MCPsignal     Methyl-accepting chemotaxis protein (MCP) signa
      0.026   12.5   0.3      0.026   12.5   0.3    2.0  2  Prominin      Prominin
      0.028   14.1   0.7        2.1    8.0   0.0    2.9  3  Vac_Fusion    Chordopoxvirus multifunctional envelope protein
      0.059   13.3   1.8       0.12   12.2   1.8    1.4  1  Herpes_US9    Alphaherpesvirus tegument protein US9
      0.064   13.6   0.6      0.064   13.6   0.6    3.1  3  V-SNARE       Vesicle transport v-SNARE protein N-terminus
      0.066   13.6   0.7         15    6.0   0.0    3.1  2  FlaC_arch     Flagella accessory protein C (FlaC)
       0.08   13.6   2.4        8.4    7.1   0.4    2.8  2  Plk4_PB2      Polo-like Kinase 4 Polo Box 2
       0.16   12.4   9.5       0.57   10.6   5.6    2.3  2  Syntaxin_2    Syntaxin-like protein
       0.18   12.3   1.7        1.8    9.0   0.1    3.0  3  DUF4094       Domain of unknown function (DUF4094)
        6.6    5.9   7.5        6.7    5.9   0.2    2.2  2  TMPIT         TMPIT-like protein


Domain annotation for each model (and alignments):
>> Syntaxin  Syntaxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.7  17.1   8.2e-33   9.9e-30       1     199 [.      20     217 ..      20     218 .. 0.95

  Alignments for each domain:
  == domain 1  score: 103.7 bits;  conditional E-value: 8.2e-33
    Syntaxin   1 leeffkeveeikkeiekleeevkklkkqneesktstraksvk.lkkrmesdikeikkraesvkarLeaLdksnkenekksgegsavdRirksqtaaLrk 98 
                 + eff+e+ +i++ i+++e++v +++  +++s++ ++++++  + +++e  +++ ++   sv+  +++L+ +n +          ++ +rk+qt+a++k
  EPX70908.1  20 MGEFFEEIDHIRDAIRQIEDNVGRIEMLHQQSLQEVDESNIAaTTRQLEGFTADTRRLQTSVQLAIRSLESQNMQLP-----PDNDTATRKTQTEAVKK 113
                 789***************************************9****************************999777.....334555789******** PP

    Syntaxin  99 klkevmteynelrekireeykerieRrlevtGkevseeeieelietge.sevflqkllqeq.rga.realseieeRhkevlelekslkeLhqlFldmav 194
                 k+ +++ ++ +++++ r +y +r +R+le++  +++ee+  + i++++  +vf q ll+ +  g+ r+al+e++eRh +++++e+ + eL qlF dma+
  EPX70908.1 114 KFMDQIRHFLQIEKTYRAQYEQRMRRQLEIANPRATEEDFQTAISEENgGQVFAQALLRSNrSGEaRTALREVQERHADIKKIERTIGELAQLFQDMAT 212
                 ********************************************9998678999999999867779********************************* PP

    Syntaxin 195 LVEeQ 199
                 +V+eQ
  EPX70908.1 213 MVQEQ 217
                 ****9 PP

>> SNARE  SNARE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.2       4.6   5.5e+03       3      12 ..      34      43 ..      28      45 .. 0.73
   2 !   50.6   0.3   1.2e-16   1.4e-13       3      53 .]     221     271 ..     219     271 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 4.6
                HHHHHHHHHH CS
       SNARE  3 vDrIdtnVen 12
                +  I++nV +
  EPX70908.1 34 IRQIEDNVGR 43
                4568888876 PP

  == domain 2  score: 50.6 bits;  conditional E-value: 1.2e-16
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTXXXXXXXXXXXXXXXXXXXX CS
       SNARE   3 vDrIdtnVenaqsnveraqkeLkkavkyqksnRklkciillilviillvvl 53 
                 vD I t+  n+++n+ ++++++++a k+++ +R++k+i+++++++i+++++
  EPX70908.1 221 VDKIVTDAVNVRTNMGEGTQHMDRAIKSARAARRKKWICFGVCILIICILV 271
                 9************************************************97 PP

>> BLOC1_2  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.2   0.0    0.0051       6.1      60      86 ..      20      46 ..      16      56 .. 0.84
   2 ?   -1.2   0.0       2.2   2.6e+03      59      81 ..      59      81 ..      47      95 .. 0.56
   3 !    7.6   0.1    0.0039       4.7      58      92 ..     184     218 ..     171     222 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0051
     BLOC1_2 60 lqpylqqidqiekqvteLeeavseLDe 86
                + +++++id i + ++++e++v +++ 
  EPX70908.1 20 MGEFFEEIDHIRDAIRQIEDNVGRIEM 46
                678899999999999999999988875 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 2.2
     BLOC1_2 59 elqpylqqidqiekqvteLeeav 81
                +++   +q++ + +++++L++ v
  EPX70908.1 59 NIAATTRQLEGFTADTRRLQTSV 81
                44444444444444444444444 PP

  == domain 3  score: 7.6 bits;  conditional E-value: 0.0039
     BLOC1_2  58 eelqpylqqidqiekqvteLeeavseLDeyskeLE 92 
                  e+q+    i++ie+++ eL ++ + + ++++e+E
  EPX70908.1 184 REVQERHADIKKIERTIGELAQLFQDMATMVQEQE 218
                 57889999999***********9999999999998 PP

>> NPV_P10  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   0.8   0.00019      0.22       8      59 ..      29      82 ..      27      99 .. 0.80
   2 ?    6.2   0.3     0.012        14      25      60 ..     181     216 ..     178     234 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00019
     NPV_P10  8 vIradikavddkVdal....qqqvddvqenlpdvtelnekLdaqsaqLaeletkve 59
                 Ir++i++++d V  +    qq++++v+e   ++   + +L++ +a    l+t+v+
  EPX70908.1 29 HIRDAIRQIEDNVGRIemlhQQSLQEVDE--SNIAATTRQLEGFTADTRRLQTSVQ 82
                69*********998775556788999988..5677889***************998 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.012
     NPV_P10  25 qqvddvqenlpdvtelnekLdaqsaqLaeletkven 60 
                 +++ +vqe + d+++++  + ++++  +++ t v++
  EPX70908.1 181 TALREVQERHADIKKIERTIGELAQLFQDMATMVQE 216
                 567899999999999999999999999999997765 PP

>> Allexi_40kDa  Allexivirus 40kDa protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.8   1.7e-05      0.02      79     173 ..      26     121 ..       7     139 .. 0.79
   2 ?    1.3   0.1      0.17     2e+02      83     144 ..     189     217 ..     160     256 .. 0.47

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 1.7e-05
  Allexi_40kDa  79 lLselrdalrtltklldklksvekklelsaetasdskllkklesietsleelhakldelssset.sesegPsssptkassaeaaasedLpiyqakh 173
                   ++ ++rda+r++++++ +++ +++++ ++ ++ +   ++++le    + ++l++ ++  ++s + ++ + P    t +++++++a ++  + q +h
    EPX70908.1  26 EIDHIRDAIRQIEDNVGRIEMLHQQSLQEVDESNIAATTRQLEGFTADTRRLQTSVQLAIRSLEsQNMQLPPDNDTATRKTQTEAVKKKFMDQIRH 121
                   5789************************999999999999****9999999999998766665505555577777776666777666555555555 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.17
  Allexi_40kDa  83 lrdalrtltklldklksvekklelsaetasdskllkklesietsleelhakldelsssetse 144
                    +++++++++++ +l+++ + +                                 +++++++
    EPX70908.1 189 RHADIKKIERTIGELAQLFQDM---------------------------------ATMVQEQ 217
                   2233334444444444333332.................................2222211 PP

>> MCPsignal  Methyl-accepting chemotaxis protein (MCP) signalling domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.5     0.053        63      90     145 ..      29      82 ..      19     113 .. 0.67
   2 ?   14.4   0.9   2.1e-05     0.025     114     165 ..     177     228 ..     149     235 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.053
                 HHHHHH..............HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH CS
   MCPsignal  90 eiealiieiqkeindsvesleetrqrveegselveetgealkeiveavaevadlvq 145
                  i+++i +i+ ++ +     +++ q+v+e+   ++ t+++l+  ++ + +++++vq
  EPX70908.1  29 HIRDAIRQIEDNVGRIEMLHQQSLQEVDES--NIAATTRQLEGFTADTRRLQTSVQ 82 
                 455566666666666666666666666653..456666677777776666666665 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 2.1e-05
                 HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   MCPsignal 114 qrveegselveetgealkeiveavaevadlvqeiaaaseeqsasieevnqav 165
                  ++ +++ +v+e + ++k+i  +++e+a+l q++a+ ++eq  +++++ +  
  EPX70908.1 177 GEARTALREVQERHADIKKIERTIGELAQLFQDMATMVQEQEPAVDKIVTDA 228
                 567788999************************************9986644 PP

>> Prominin  Prominin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   4.4     0.043        52     572     675 ..      30     139 ..      22     176 .. 0.61
   2 ?   12.5   0.3   2.1e-05     0.026     361     442 ..     193     278 ..     173     287 .] 0.49

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.043
    Prominin 572 iqkelenlkvdlsnlelLteeerkdLeklresglski..hsslyleqlckkltkvnletlaekleelanelsngk.........knlkqslkneaqdlr 659
                 i++ + +++ ++  +e+L++   ++L+++ es++     + + +++++++  t+v+l    ++le+   +l++ +         + +k+++  + +++ 
  EPX70908.1  30 IRDAIRQIEDNVGRIEMLHQ---QSLQEVDESNIAATtrQLEGFTADTRRLQTSVQL--AIRSLESQNMQLPPDNdtatrktqtEAVKKKFMDQIRHFL 123
                 55566666777777777754...6788888888865511567789998888777777..4555666666666666344455555556666666666665 PP

    Prominin 660 aiqqelvlplessvkk 675
                 +i++++  + e+ ++ 
  EPX70908.1 124 QIEKTYRAQYEQRMRR 139
                 5555555555554443 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 2.1e-05
    Prominin 361 vpdlkkalakgreqikklakkip..realdavisdlenterssktfddvvekyekyrwli..glivcsllllivvililgLlcGil 442
                 ++++ +++ +  + ++++a+++   + a+d+++ d  n+ +++ + ++ ++++ k  +++     +c+ + + +++ +++ lcG+l
  EPX70908.1 193 IKKIERTIGELAQLFQDMATMVQeqEPAVDKIVTDAVNVRTNMGEGTQHMDRAIKSARAArrKKWICFGVCILIICILVAVLCGVL 278
                 45555666666666666666665433355555555545555544444444444333222211234444444444445555555543 PP

>> Vac_Fusion  Chordopoxvirus multifunctional envelope protein A27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.054        65       2      26 ..      34      58 ..      33      68 .. 0.87
   2 ?   -2.5   0.1       3.4     4e+03      14      25 ..     120     131 ..     109     140 .. 0.54
   3 ?    8.0   0.0    0.0018       2.1       1      44 [.     192     235 ..     192     240 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.054
                HHHHHHHHHHHHHHHHHHHHHHHHH CS
  Vac_Fusion  2 lkdleerllvlekdfqlvikcckrv 26
                ++++e+ + ++e ++q++ ++  ++
  EPX70908.1 34 IRQIEDNVGRIEMLHQQSLQEVDES 58
                899**************99887665 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 3.4
                 HHHHHHHHHHHH CS
  Vac_Fusion  14 kdfqlvikcckr 25 
                   f +++k ++ 
  EPX70908.1 120 RHFLQIEKTYRA 131
                 445555555554 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.0018
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-XXXXXXXXX CS
  Vac_Fusion   1 dlkdleerllvlekdfqlvikcckrvnealkRlEnHleTlRkam 44 
                 d+k++e+ +  l+++fq+++   ++++ a++ +   +  +R +m
  EPX70908.1 192 DIKKIERTIGELAQLFQDMATMVQEQEPAVDKIVTDAVNVRTNM 235
                 69**********************99999998877777777776 PP

>> Herpes_US9  Alphaherpesvirus tegument protein US9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   1.8    0.0001      0.12      28      49 ..     253     276 ..     241     280 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.0001
  Herpes_US9  28 RkkrtfCvi..tliivllvAvlsa 49 
                 R+k+  C++  +lii++lvAvl +
  EPX70908.1 253 RRKKWICFGvcILIICILVAVLCG 276
                 44446675522799*******987 PP

>> V-SNARE  Vesicle transport v-SNARE protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1       3.8   4.5e+03      26      35 ..      33      42 ..      25      66 .. 0.56
   2 ?   -0.6   0.8       1.5   1.8e+03      66      66 ..     122     122 ..      81     142 .. 0.56
   3 ?   13.6   0.6   5.3e-05     0.064      20      55 ..     186     222 ..     168     237 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 3.8
     V-SNARE 26 alreiekkld 35
                a+r+ie  + 
  EPX70908.1 33 AIRQIEDNVG 42
                3333333333 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 1.5
     V-SNARE  66 y 66 
                 +
  EPX70908.1 122 F 122
                 1 PP

  == domain 3  score: 13.6 bits;  conditional E-value: 5.3e-05
     V-SNARE  20 geerkaalreiekkldeaeelldqMelEvrnl.psse 55 
                  +er+a +++ie+ + e+ +l++ M   v++  p+ +
  EPX70908.1 186 VQERHADIKKIERTIGELAQLFQDMATMVQEQePAVD 222
                 26************************99999866654 PP

>> FlaC_arch  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0     0.013        15      16      39 ..      20      43 ..      12      50 .. 0.76
   2 ?    4.3   0.0     0.044        53      13      44 ..     176     207 ..     172     214 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.013
   FlaC_arch 16 letvkkeneelsksveelkenVkd 39
                ++   +e++++++ + ++++nV +
  EPX70908.1 20 MGEFFEEIDHIRDAIRQIEDNVGR 43
                555667999999999999999954 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.044
   FlaC_arch  13 steletvkkeneelsksveelkenVkdllsLY 44 
                 s e  t+ +e +e   +++++++++ +l +L+
  EPX70908.1 176 SGEARTALREVQERHADIKKIERTIGELAQLF 207
                 66778999999**************9987775 PP

>> Plk4_PB2  Polo-like Kinase 4 Polo Box 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.4    0.0071       8.4      31      92 ..      72     132 ..      62     142 .. 0.80
   2 ?    5.3   0.0     0.025        30      42      93 ..     154     204 ..     142     214 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0071
    Plk4_PB2  31 dgakvtkssgekvkiieksgksltleseeeleslsselkkllehaeeclkqclklesalssl 92 
                  +++  ++s  ++ i + + ++++l+ ++++++ +++++++ +++ +  ++ l++e++  + 
  EPX70908.1  72 ADTRRLQTSV-QLAIRSLESQNMQLPPDNDTATRKTQTEAVKKKFMDQIRHFLQIEKTYRAQ 132
                 4544444444.577777788899999999****************************98765 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.025
    Plk4_PB2  42 kvkiieksgksltleseeeleslsselkkllehaeeclkqclklesalssle 93 
                 ++ i e++g ++  ++    ++ s e++  l+ ++e +  + k+e+++ +l+
  EPX70908.1 154 QTAISEENGGQVFAQAL-LRSNRSGEARTALREVQERHADIKKIERTIGELA 204
                 47788888877777666.8899999*********************998776 PP

>> Syntaxin_2  Syntaxin-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   5.6   0.00048      0.57       2      95 ..      31     131 ..      29     137 .. 0.87
   2 ?    3.3   0.1     0.087     1e+02      36      76 ..     190     225 ..     166     254 .. 0.66

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00048
  Syntaxin_2   2 ssnlqkinsnvstleklvkq.Lgtk..kdteelreklhelieeinelikktnellkklsqldnsssds....qqklqkekLkkdfkealqeFqkiqrqy 93 
                  + + +i  nv  +e l +q L+     +   + ++l+  + ++++l + ++  +++l++   +++ +    ++k+q e  kk+f + +++F +i + y
  EPX70908.1  31 RDAIRQIEDNVGRIEMLHQQsLQEVdeSNIAATTRQLEGFTADTRRLQTSVQLAIRSLESQNMQLPPDndtaTRKTQTEAVKKKFMDQIRHFLQIEKTY 129
                 67899**************9777663234677779***********************99999988778999***********************9999 PP

  Syntaxin_2  94 ae 95 
                 + 
  EPX70908.1 130 RA 131
                 75 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.087
  Syntaxin_2  36 helieeinelikktnellkklsqldnsssdsqqklqkekLk 76 
                 h  i++i ++i +  +l+++++++ + ++      + +k++
  EPX70908.1 190 HADIKKIERTIGELAQLFQDMATMVQEQEP-----AVDKIV 225
                 555666666666666666666666665543.....444444 PP

>> DUF4094  Domain of unknown function (DUF4094)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0       1.6   1.9e+03      58      80 ..      24      46 ..      17      53 .. 0.85
   2 ?    0.1   0.1      0.91   1.1e+03      28      61 ..      80     119 ..      70     124 .. 0.61
   3 ?    9.0   0.1    0.0015       1.8      48      78 ..     173     203 ..     133     208 .. 0.72

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 1.6
     DUF4094 58 lgevskthkaiqtLdktissLem 80
                ++e+++ ++ai++++  +  +em
  EPX70908.1 24 FEEIDHIRDAIRQIEDNVGRIEM 46
                67889999999999999999999 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.91
     DUF4094  28 s.diirqs.k.eelkl.vsedcdskdaesr..skdilgev 61 
                 s +++ +s + ++++l   +d ++++ +++  +k+ ++++
  EPX70908.1  80 SvQLAIRSlEsQNMQLpPDNDTATRKTQTEavKKKFMDQI 119
                 2344444443477777666777776666666788888876 PP

  == domain 3  score: 9.0 bits;  conditional E-value: 0.0015
     DUF4094  48 kdaesrskdilgevskthkaiqtLdktissL 78 
                 ++  ++ ++ l+ev+++h +i+++++ti +L
  EPX70908.1 173 SNRSGEARTALREVQERHADIKKIERTIGEL 203
                 555666899*******************988 PP

>> TMPIT  TMPIT-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   3.5     0.095   1.1e+02       8      87 ..      31     127 ..      24     160 .. 0.53
   2 ?    5.9   0.2    0.0056       6.7      54     108 ..     184     233 ..     148     281 .. 0.69

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.095
       TMPIT   8 ekefkeleetakeykqkleelsklqskcskeikkqkkrlkelksslkklkksvk...................eeeeeeveelkeelkerkkvlkeves 87 
                 ++ ++++e++  +++   +  ++lq+   ++i+  +++l+ ++++ ++l++sv+                   + +++++e +k++++++ + + ++e+
  EPX70908.1  31 RDAIRQIEDNVGRIEMLHQ--QSLQEVDESNIAATTRQLEGFTADTRRLQTSVQlairslesqnmqlppdndtATRKTQTEAVKKKFMDQIRHFLQIEK 127
                 5555555555533333222..233444444555555555555555555555544444432222234444444444444555555555555555555554 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0056
       TMPIT  54 kklkksvkeeeeeeveelkeelkerkkvlkevesllpkknglylklvlGnvnvsl 108
                 +++     +e++  ++++++++ e  + +++++ +  +++    k+v   vnv+ 
  EPX70908.1 184 REV-----QERHADIKKIERTIGELAQLFQDMATMVQEQEPAVDKIVTDAVNVRT 233
                 222.....45566777777777777777777777777777777777777777764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (287 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1899  (0.105918); expected 358.6 (0.02)
Passed bias filter:                      857  (0.0477997); expected 358.6 (0.02)
Passed Vit filter:                       104  (0.00580066); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.61u 0.30s 00:00:00.90 Elapsed: 00:00:00.46
# Mc/sec: 1883.26
//
Query:       EPX70909.1  [L=186]
Description: histone N-acetyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.6e-12   47.0   0.0    3.6e-12   46.6   0.0    1.2  1  Acetyltransf_1   Acetyltransferase (GNAT) family
    4.5e-09   36.3   0.0      8e-09   35.5   0.0    1.4  1  Acetyltransf_10  Acetyltransferase (GNAT) domain
    2.4e-06   27.9   0.0    4.6e-06   27.0   0.0    1.4  1  Acetyltransf_7   Acetyltransferase (GNAT) domain
    1.2e-05   25.2   0.0      2e-05   24.5   0.0    1.3  1  FR47             FR47-like protein
     0.0025   18.0   0.2     0.0041   17.3   0.2    1.4  1  Acetyltransf_4   Acetyltransferase (GNAT) domain
  ------ inclusion threshold ------
      0.075   13.2   0.0       0.15   12.2   0.0    1.4  1  Acetyltransf_CG  GCN5-related N-acetyl-transferase
        0.1   12.6   0.0       0.16   12.1   0.0    1.4  1  Acetyltransf_9   Acetyltransferase (GNAT) domain


Domain annotation for each model (and alignments):
>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.6   0.0   1.4e-15   3.6e-12      22     117 .]      58     157 ..      36     157 .. 0.78

  Alignments for each domain:
  == domain 1  score: 46.6 bits;  conditional E-value: 1.4e-15
                     HHHHHH..HHSTTCEEEE...EEETTEEEEEEEEEEEETTSTTEEEEEEEEESGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTEHHHHHH CS
  Acetyltransf_1  22 eefees..fsleaegllv...aeedgeliGfisllkipdekggvayieslaVspeyrgkGlGsaLlealeerareegikkivlaveedndaairl 111
                     +e e++   s ++ ++++   +e+  +liGf+s+    + + ++ y+++l + ++ r+kG Gs L+++l ++a+++ i +++l+v+  n++a  +
      EPX70909.1  58 DEEEKWkeMSMDTLHYVClytIEH-HKLIGFMSFEETIEADLPCLYLYELQITKDMRRKGCGSWLMKQLTRIAEQRRIPYLFLTVFGKNEQALQF 151
                     332222222223333333221444.58************999***************************************************** PP

                     HHHTTE CS
  Acetyltransf_1 112 YeklGF 117
                     Y ++ F
      EPX70909.1 152 YHRFHF 157
                     *99988 PP

>> Acetyltransf_10  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.5   0.0   3.1e-12     8e-09      19     112 ..      60     164 ..      40     170 .. 0.86

  Alignments for each domain:
  == domain 1  score: 35.5 bits;  conditional E-value: 3.1e-12
  Acetyltransf_10  19 pealreri.eegealllvaeeggkivGvielrdgs.......hisllfVdpeyrgqGigkaLleaveeeaekdgikl.eltvnasp.yavpfYe 102
                      +e+++e+  ++ ++++l   e  k++G+ + +++        +++ l + ++ r++G g+ L++++ + ae+++i    ltv  ++ +a +fY+
       EPX70909.1  60 EEKWKEMSmDTLHYVCLYTIEHHKLIGFMSFEETIeadlpclYLYELQITKDMRRKGCGSWLMKQLTRIAEQRRIPYlFLTVFGKNeQALQFYH 153
                      47788877456677777777889******9977766999**********************************9999********99******* PP

  Acetyltransf_10 103 klGFkav.gee 112
                      ++ F ++ +++
       EPX70909.1 154 RFHFSPHaTSP 164
                      ****9885555 PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.0   0.0   1.8e-09   4.6e-06       6      75 ..      77     158 ..      69     159 .. 0.66

  Alignments for each domain:
  == domain 1  score: 27.0 bits;  conditional E-value: 1.8e-09
                     EEEEETTEEEEEEEEEEES......TCTEEEEE-GGGTTSSHHHHHHHH....TT.SEEEEE.EEEE....THHHHHHHHHHTTEE CS
  Acetyltransf_7   6 fVaeddgkivGfialslld......aeitrlaVdpeyrgkGiGraLlea....ae.kgiile.qlel....naekaikfYeklGFe 75 
                     + +e+  k +Gf++++++        ++ +l + ++ r+kG G+ L++     ae +    + +l l    ++e+a++fY ++ F 
      EPX70909.1  77 YTIEH-HKLIGFMSFEETIeadlpcLYLYELQITKDMRRKGCGSWLMKQltriAEqRR---IpYLFLtvfgKNEQALQFYHRFHFS 158
                     33333.7888**99999988665544444467***************96454311222...222233335544499*********7 PP

>> FR47  FR47-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   0.0   7.8e-09     2e-05      23      78 ..     102     158 ..      91     163 .. 0.84

  Alignments for each domain:
  == domain 1  score: 24.5 bits;  conditional E-value: 7.8e-09
                 SEEEEEE-GGG-SSSHHHHHHHHHHHHHHH.S-S-EEEEEETT-HHHHHHHHHHT-E CS
        FR47  23 elgalqvlpehrrrGlgsrlvkalakeiae.rgktvllvvvasNtpsirlyeklGfe 78 
                 +l+ lq+ +++rr+G gs l k+l++   + r   ++l v  +N+++ ++y +  f 
  EPX70909.1 102 YLYELQITKDMRRKGCGSWLMKQLTRIAEQrRIPYLFLTVFGKNEQALQFYHRFHFS 158
                 799*********************985555333456788889**********99885 PP

>> Acetyltransf_4  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.2   1.6e-06    0.0041      24     134 ..      47     157 ..      29     163 .. 0.75

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 1.6e-06
  Acetyltransf_4  24 aitfeyevssveefekfleal.dsekeyvflvaesdrivGyaylgqfkkrakdwkaelsvyla.erdnnkeglgrelidaleqvlkeqnienlla 116
                     +   e  v s +e ek+ e+  d++    +  +e  +++G +  ++      d  ++  + l+  +d++ +g g++l++ l  ++ +  i +l+ 
      EPX70909.1  47 QTLYENSVLSWDEEEKWKEMSmDTLHYVCLYTIEHHKLIGFMSFEETIE--ADLPCLYLYELQiTKDMRRKGCGSWLMKQLTRIAEQRRIPYLFL 139
                     4445566677777778877775566666666677888899888885555..3444444444444599**************************** PP

  Acetyltransf_4 117 eiaspnensiqfhkalGF 134
                      ++ +ne++ qf+ ++ F
      EPX70909.1 140 TVFGKNEQALQFYHRFHF 157
                     *************99876 PP

>> Acetyltransf_CG  GCN5-related N-acetyl-transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   5.8e-05      0.15       7      56 ..      80     132 ..      73     135 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 5.8e-05
  Acetyltransf_CG   7 degeevafleYevrkeg...vldfthTeVpeelrGkGiAkkLvkaalddaree 56 
                      ++++ ++f+++e++ e     l ++   + + +r+kG ++ L+k+    a+++
       EPX70909.1  80 EHHKLIGFMSFEETIEAdlpCLYLYELQITKDMRRKGCGSWLMKQLTRIAEQR 132
                      356789*****84444346699***********************99888876 PP

>> Acetyltransf_9  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   6.1e-05      0.16      69     125 ..      96     157 ..      31     159 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 6.1e-05
                     EEEEEEEEEEEEE-CCGTTS-HHHHHHHHHHHHHHHTT--EEEE--.....SSHHHHHTTT- CS
  Acetyltransf_9  69 ktlkaagvtgVavapehrgrgvlskLlaraleemreegqplsllfP.....ssipiYrrfGy 125
                     + l++ +++      + r++g  s L++++ + ++++++p  +l+       + ++Y+rf +
      EPX70909.1  96 ADLPCLYLYELQITKDMRRKGCGSWLMKQLTRIAEQRRIPYLFLTVfgkneQALQFYHRFHF 157
                     6789999999999*******************************997776656799999977 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       550  (0.0306766); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.46u 0.28s 00:00:00.74 Elapsed: 00:00:00.45
# Mc/sec: 1247.28
//
Query:       EPX70910.1  [L=291]
Description: splicing coactivator SRRM1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-27   94.4   0.1    6.3e-27   93.7   0.1    1.4  1  PWI       PWI domain
  ------ inclusion threshold ------
       0.42   11.3   2.0         12    6.6   0.1    3.1  3  CdiI_2    CdiI immunity protein


Domain annotation for each model (and alignments):
>> PWI  PWI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.7   0.1     7e-31   6.3e-27       1      71 [.      45     127 ..      45     128 .. 0.90

  Alignments for each domain:
  == domain 1  score: 93.7 bits;  conditional E-value: 7e-31
         PWI   1 dvlkpWIakkitellgfeDdvvieyvlnlLeee............keldpkklqinltgfLekeaekFvkeLWelllsaqsse 71 
                 +vlkpWIa++++el+gfeD+vvi++v+++Lee+             +ldpkk+q nltgfLe++a++F +eLW l+lsa++++
  EPX70910.1  45 EVLKPWIANRLIELIGFEDEVVIDFVYSMLEEAveaskntdshneSTLDPKKVQLNLTGFLESKAPEFAEELWLLILSASQNP 127
                 69****************************54455556666667799*********************************997 PP

>> CdiI_2  CdiI immunity protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.17   1.5e+03      59      85 ..      80     106 ..      63     109 .. 0.72
   2 ?    1.9   0.1     0.041   3.7e+02      39      81 ..     134     173 ..     129     175 .. 0.74
   3 ?    6.6   0.1    0.0013        12      24      63 ..     231     270 ..     223     287 .. 0.79

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.17
      CdiI_2  59 leeaflaelgaefdpeawgltarefLe 85 
                   + ++++ ++  dp++ +l+   fLe
  EPX70910.1  80 ASKNTDSHNESTLDPKKVQLNLTGFLE 106
                 556677788899999999999999998 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.041
      CdiI_2  39 evaelideieellassldeeleeaflaelgaefdpeawgltar 81 
                  +++  +e+ +l ++++    e+++++e+++   p+ +++t r
  EPX70910.1 134 FIQQKKEELSKLRSQRDV--SESEVKKEIDRSLHPA-EERTSR 173
                 566777788888886663..7999999999999999.666655 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.0013
      CdiI_2  24 ieeiledYvssespeevaelideieellassldeeleeaf 63 
                  ++  ++Y+ss +p  ++   de++e+ +s+++e  e++ 
  EPX70910.1 231 DNNNTRSYRSSRHPRSIRNRHDEFDEFGRSRPSERRETDY 270
                 5677799************************988755554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (291 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1079  (0.0601818); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2044.93
//
Query:       EPX70911.1  [L=152]
Description: 40S ribosomal protein S18 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.4e-53  178.8   4.1    6.2e-53  178.6   4.1    1.0  1  Ribosomal_S13  Ribosomal protein S13/S18
     0.0037   16.1   0.0     0.0041   15.9   0.0    1.2  1  FbpA           Fibronectin-binding protein A N-terminus (FbpA
     0.0085   16.3   0.3      0.033   14.4   0.1    2.0  2  HHH_6          Helix-hairpin-helix motif
  ------ inclusion threshold ------
      0.061   12.9   0.1      0.086   12.4   0.1    1.2  1  Period_C       Period protein 2/3C-terminal region


Domain annotation for each model (and alignments):
>> Ribosomal_S13  Ribosomal protein S13/S18
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.6   4.1   1.4e-56   6.2e-53       1     128 []      14     142 ..      14     142 .. 0.99

  Alignments for each domain:
  == domain 1  score: 178.6 bits;  conditional E-value: 1.4e-56
  Ribosomal_S13   1 RilgtdidgkkkveialtaikGiGrrkakiilkkadvdedkrigelteeeiekieeivenkaqykipnwi.nrqkdikdGkdshvvendlrrklre 95 
                    R+l+t++dgk+kv++a+t+ikG+Grr+a+i++kkadvd++kr+gelt ee+e++++iv+n++q+kip+w+ nrqkdi+dGk++++++n+++ klre
     EPX70911.1  14 RLLNTNVDGKQKVMYAMTQIKGVGRRYANIVCKKADVDMSKRAGELTTEELERLVTIVQNPTQFKIPTWFlNRQKDINDGKSHQLLSNNVEGKLRE 109
                    89********************************************************************************************** PP

  Ribosomal_S13  96 dieRlkkirsyrGlRHkrGlkvRGQrTkttgRt 128
                    d+eRlkki+++rGlRH   l+vRGQ+TkttgR+
     EPX70911.1 110 DLERLKKIQAHRGLRHALDLRVRGQHTKTTGRR 142
                    ********************************7 PP

>> FbpA  Fibronectin-binding protein A N-terminus (FbpA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   9.2e-07    0.0041     187     237 ..      23      73 ..       4     119 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 9.2e-07
                 XXXHHHHHHHBTTXXHHHHHHHHTTXSSSH...............HHHHHH CS
        FbpA 187 kdlvkaLvkafqGlspllaeelleragldketsakelseedlerlyealqe 237
                 k+ v   +++++G+++ +a+ ++++a +d  ++a el++e+lerl + +q+
  EPX70911.1  23 KQKVMYAMTQIKGVGRRYANIVCKKADVDMSKRAGELTTEELERLVTIVQN 73 
                 44444557899**********************************988876 PP

>> HHH_6  Helix-hairpin-helix motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.1   7.4e-06     0.033      21      76 ..      22      69 ..      10      71 .. 0.82
   2 ?   -1.5   0.0      0.71   3.2e+03      68      81 ..     108     121 ..      86     132 .. 0.62

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 7.4e-06
       HHH_6 21 edgairlGLaaikglgeaaaerivaeRekegpfksledlarrvdslnkrqleaLak 76
                 ++++++++++ikg+g++ a+ + ++ +         d+++r+++l++++le+L++
  EPX70911.1 22 GKQKVMYAMTQIKGVGRRYANIVCKKAD--------VDMSKRAGELTTEELERLVT 69
                3455**************9988887443........799999999*******9997 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.71
       HHH_6  68 krqleaLakaGald 81 
                 +++le+L k+ a +
  EPX70911.1 108 REDLERLKKIQAHR 121
                 45555555555544 PP

>> Period_C  Period protein 2/3C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   1.9e-05     0.086      95     137 ..      77     119 ..      46     122 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.9e-05
    Period_C  95 lqdPiWllmantdeevmmtYQlpsrdleeVLkeDrekLkalqk 137
                 ++ P W l+ + d +   + Ql s ++e  L+eD e+Lk++q 
  EPX70911.1  77 FKIPTWFLNRQKDINDGKSHQLLSNNVEGKLREDLERLKKIQA 119
                 45699********999*************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       646  (0.036031); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 1055.58
//
Query:       EPX70912.1  [L=821]
Description: peptidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.8e-35  120.8   0.0      1e-34  120.0   0.0    1.4  1  Peptidase_M28  Peptidase family M28
  ------ inclusion threshold ------
      0.019   14.9   0.2      0.046   13.6   0.2    1.6  1  rpo30_N        Poxvirus DNA dependent RNA polymerase 30kDa su
      0.026   14.2   0.0      0.031   14.0   0.0    1.3  1  Peptidase_M20  Peptidase family M20/M25/M40


Domain annotation for each model (and alignments):
>> Peptidase_M28  Peptidase family M28
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.0   0.0   1.7e-38     1e-34       1     196 [.     139     330 ..     139     332 .. 0.94

  Alignments for each domain:
  == domain 1  score: 120.0 bits;  conditional E-value: 1.7e-38
                    EEEEEESTTCE...SEEEEEEEE--B-TTTTCCT---TTTTHHHHHHHHHHHHHCHHGGCCSSEEEEEEEESSCSGSSHHHHHHHHHHCCCTTEEE CS
  Peptidase_M28   1 Nviatlegkat...devlllgAHyDsvgvgrgpifvGAdDnAsgvaalLelarvlaasgsrpkrgvrflffdaEEagllGSkafakakpelkkiaa 93 
                    N+ ++l++++    +e +l++AH+Ds+    +p   GA+D+A  v++lLe +rvl +++  ++++v+flf+daEE     S+ f++++  ++ +++
     EPX70912.1 139 NIAVRLSNGTDaskEEAVLVNAHVDSTLP--SP---GATDDALAVGILLENLRVLSSQPIPLTHSVVFLFNDAEESLQDASHMFITQSVIKDSVKC 229
                    7888886555557678************9..**...*********************99888*************99999999996767******* PP

                    EEEECS-SSSS--EEEHHHHHHCHHHHHHHHHHHHHTT-TTSCCEEEEESSTT-STTHHHHTTT.--EEEECTSSS-TTTTSTTSSGGGB-HHHHH CS
  Peptidase_M28  94 vlnlDmvgsggkellfesgdkssselekelkalakpvgraaaedpfdersgrgrsDhspflkag.vpvldlaetgfpevyHtprDtldnidkdtla 188
                    v+nl+++g++g e+lf   +++s+e+ k ++++ +p+g+  a d+f  + + +++D+++f+++g   +ld+a  ++ + yHt++D + +i+++t++
     EPX70912.1 230 VINLEACGTTGAEILF---QATSNEMIKAYSHAPRPFGTVLADDVFRTGIIISDTDFRQFVQYGnLTGLDMAVVQNSYLYHTKKDSPPYISPGTAQ 322
                    ***************9...99999************************************************************************ PP

                    HHHHHHHH CS
  Peptidase_M28 189 riaelvle 196
                    +++e+vl+
     EPX70912.1 323 QFGENVLA 330
                    ****9987 PP

>> rpo30_N  Poxvirus DNA dependent RNA polymerase 30kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.2   7.6e-06     0.046      23      94 ..      80     150 ..      57     158 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 7.6e-06
     rpo30_N  23 aldkaekyylknivntksnieetkfepknniGieysk.daknklsyrnkplietneeykdlcdl.ikatnGaek 94 
                  +d a++y + +i   + n+e++ f+ ++ i i y   d  + + + nk +i+   +y+ l+++ ++ +nG++ 
  EPX70912.1  80 EEDLAREYIMNEILAIQKNLEDSPFSNTHQIEIYYETgDGAHLFDFMNKHVIK---KYHGLRNIaVRLSNGTDA 150
                 5688999****************************8626667779*******7...577776643788888874 PP

>> Peptidase_M20  Peptidase family M20/M25/M40
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   5.1e-06     0.031      33      96 ..     169     232 ..     157     640 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 5.1e-06
                    TTTTTTHHHHHHHHHHHHHHHHHTTT-SSEEEEEEESTTSSTTTHHHHHHH.HHHTTTCESEEEE CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxx RF
  Peptidase_M20  33 rGaddmkggvlaalealralkdegikpkgtivllfqpdEEggrgGakalle.gleerekvdavfe 96 
                    +Ga+d+   v ++le lr l  + i + +++v+lf  +EE+  + +  ++  ++  ++ v++v+ 
     EPX70912.1 169 PGATDDALAVGILLENLRVLSSQPIPLTHSVVFLFNDAEESLQDASHMFITqSVI-KDSVKCVIN 232
                    7***************************************753333333333333.445555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (821 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       713  (0.039768); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.68u 0.30s 00:00:00.98 Elapsed: 00:00:00.48
# Mc/sec: 5172.37
//
Query:       EPX70913.1  [L=119]
Description: DNA-directed RNA polymerase complex I subunit Rpa12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.7e-17   63.0   8.6    3.4e-13   49.2   0.7    3.0  2  RNA_POL_M_15KD   RNA polymerases M/15 Kd subunit
    4.1e-17   61.7   1.1    4.1e-17   61.7   1.1    3.0  3  TFIIS_C          Transcription factor S-II (TFIIS)
      2e-06   27.0  10.8       0.01   15.2   0.9    3.6  3  zf-ribbon_3      zinc-ribbon domain
    3.3e-06   27.0   8.2     0.0026   17.7   0.9    2.6  2  DZR              Double zinc ribbon
    0.00028   20.7   4.9     0.0011   18.9   0.5    2.4  2  C1_1             Phorbol esters/diacylglycerol binding domain
    0.00082   19.2   8.6        7.6    6.6   0.2    4.2  4  zinc_ribbon_4    zinc-ribbon domain
     0.0023   17.9   7.9       0.37   10.8   0.4    3.0  2  HypA             Hydrogenase/urease nickel incorporation, met
     0.0028   17.0   1.1     0.0028   17.0   1.1    2.3  2  zf-TFIIB         Transcription factor zinc-finger
     0.0039   16.8  13.7        2.4    7.8   0.1    4.3  4  zf_UBZ           Ubiquitin-Binding Zinc Finger
     0.0087   15.7  16.6        1.6    8.5   1.6    3.5  3  zinc_ribbon_2    zinc-ribbon domain
  ------ inclusion threshold ------
      0.011   15.8   5.4        8.7    6.6   0.0    4.1  4  zf-RING_7        C4-type zinc ribbon domain
      0.012   15.6   8.3       0.15   12.1   2.9    3.1  2  Zn_Tnp_IS1595    Transposase zinc-ribbon domain
      0.015   15.2   0.9      0.015   15.2   0.9    2.6  2  Ogr_Delta        Ogr/Delta-like zinc finger
      0.023   14.2  12.7       0.16   11.5   3.2    3.3  3  TF_Zn_Ribbon     TFIIB zinc-binding
      0.026   14.1   0.6      0.026   14.1   0.6    3.3  3  RecR             RecR protein
      0.037   13.7   6.5       0.84    9.4   0.0    3.3  3  Baculo_LEF5_C    Baculoviridae late expression factor 5 C-ter
      0.039   12.5   0.2      0.039   12.5   0.2    1.5  2  Terminase_GpA    Phage terminase large subunit (GpA)
      0.046   13.6   9.6        1.6    8.7   0.8    2.7  2  OrfB_Zn_ribbon   Putative transposase DNA-binding domain
      0.048   13.5  12.3        1.7    8.6   1.2    3.3  3  zf-FPG_IleRS     Zinc finger found in FPG and IleRS
      0.058   13.9   0.1      0.058   13.9   0.1    3.6  4  zf-H2C2_2        Zinc-finger double domain
       0.07   13.0   3.2        1.2    9.1   0.2    2.9  3  zf-C3HC4_3       Zinc finger, C3HC4 type (RING finger)
       0.07   12.8   8.1        0.1   12.3   0.1    3.3  4  Ribosomal_S27e   Ribosomal protein S27
      0.074   13.0   0.0        0.1   12.6   0.0    1.3  1  CNP1             CNP1-like family
       0.11   13.1   8.0        0.2   12.2   0.7    2.2  2  Stc1             Stc1 domain
       0.13   12.2  11.3        5.9    6.9   2.9    3.9  2  Nudix_N_2        Nudix N-terminal
       0.14   12.3   7.0        1.2    9.2   1.5    2.8  2  zf-MYND          MYND finger
       0.15   12.0   8.6        1.2    9.1   0.5    3.7  4  DUF3797          Domain of unknown function (DUF3797)
       0.18   12.2  10.7        0.7   10.3   2.4    2.9  2  Lar_restr_allev  Restriction alleviation protein Lar
        0.2   11.7   5.3          5    7.2   3.4    2.8  2  RNHCP            RNHCP domain
       0.21   10.4   0.7       0.38    9.6   0.7    1.6  1  tRNA-synt_1f     tRNA synthetases class I (K)
       0.29   11.4   9.6        7.4    6.8   1.2    3.4  3  zf-AN1           AN1-like Zinc finger
       0.39   10.9  16.5        4.6    7.4   0.7    3.5  3  Zn-ribbon_8      Zinc ribbon domain
       0.46   10.6  11.5       0.14   12.3   3.2    3.0  3  zf-Mss51         Zinc-finger of mitochondrial splicing suppre
       0.77   10.5  11.5      4e+02    1.8  11.6    3.2  1  zinc_ribbon_15   zinc-ribbon family
       0.83    9.9   6.3        3.7    7.8   0.1    3.0  3  DUF2072          Zn-ribbon containing protein
       0.89    9.4  12.7        1.4    8.8   0.1    3.9  4  PADR1            PADR1 (NUC008) domain
       0.94    9.8   7.1          1    9.7   2.1    2.8  2  Rpr2             RNAse P Rpr2/Rpp21/SNM1 subunit domain
       0.95   10.2   8.0         14    6.5   0.1    3.8  4  zf-ISL3          zinc-finger of transposase IS204/IS1001/IS10
       0.97    9.5   5.9        3.2    7.8   0.6    2.9  3  zf-C2HC5         Putative zinc finger motif, C2HC5-type
       0.98   10.0   7.0        7.3    7.2   0.4    2.9  2  Zn_ribbon_recom  Recombinase zinc beta ribbon domain
          1    9.7  11.5        1.3    9.3   0.3    3.5  3  C1_4             TFIIH C1-like domain
        1.2    9.2  11.9         16    5.6   2.5    3.4  3  YhfH             YhfH-like protein
        1.4    9.5  13.3        0.9   10.1   1.2    4.0  4  zf-C2H2          Zinc finger, C2H2 type
        1.5    8.6  10.2        7.4    6.3   0.0    4.1  4  zf-RRN7          Zinc-finger of RNA-polymerase I-specific TFI
        1.6    8.4   9.3          4    7.0   0.1    3.0  3  zf_C2H2_10       C2H2 type zinc-finger
        1.8    8.9  10.0        9.3    6.6   0.1    3.7  3  zinc_ribbon_9    zinc-ribbon
        1.8    8.4  15.1         36    4.3   8.0    4.0  4  zf-C4_Topoisom   Topoisomerase DNA binding C4 zinc finger
        2.2    8.3   8.2         11    6.1   1.6    3.1  3  zf-RING_5        zinc-RING finger domain
        2.7    8.0  10.0        5.9    6.9   1.3    3.4  3  HalOD2           Halobacterial output domain 2
        2.8    9.0  13.9        4.9    8.2   0.8    4.2  4  zf-C2H2_4        C2H2-type zinc finger
        3.6    7.7  18.1        3.7    7.7   0.5    4.1  4  zf-ACC           Acetyl-coA carboxylase zinc finger domain
        4.2    7.5  19.1       0.38   10.9   0.7    3.8  3  UPF0547          Uncharacterised protein family UPF0547
        4.3    7.6  13.3        5.1    7.3   0.2    3.7  4  NOB1_Zn_bind     Nin one binding (NOB1) Zn-ribbon like
        4.9    6.8   9.5        8.5    6.1   1.0    3.3  3  zf-tcix          Putative treble-clef, zinc-finger, Zn-bindin
          5    6.7  11.6        2.1    7.8   0.5    3.1  3  Mu-like_Com      Mu-like prophage protein Com
        5.3    7.1  12.4        9.4    6.3   2.5    3.5  3  CpXC             CpXC protein
        5.6    7.0  11.5         88    3.2   3.4    4.0  3  PhnA_Zn_Ribbon   PhnA Zinc-Ribbon
        6.5    7.2  13.4         14    6.1   0.1    3.4  3  Opy2             Opy2 protein
        7.8    6.5  10.1         14    5.6   0.1    3.8  4  DUF35_N          Rubredoxin-like zinc ribbon domain (DUF35_N)
        8.5    6.5   8.5        1.6    8.8   0.2    3.1  3  Nop10p           Nucleolar RNA-binding protein, Nop10p family


Domain annotation for each model (and alignments):
>> RNA_POL_M_15KD  RNA polymerases M/15 Kd subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.2   0.7   1.1e-15   3.4e-13       2      36 .]       8      39 ..       7      39 .. 0.96
   2 !   15.6   1.9   3.7e-05     0.011       4      31 ..      80     115 ..      80     118 .. 0.88

  Alignments for each domain:
  == domain 1  score: 49.2 bits;  conditional E-value: 1.1e-15
                    EBESTTTSBEEEEECSCCCEEEESSSS-EEESSCS CS
  RNA_POL_M_15KD  2 kFCpkCgNlLlpkedkegknfeCrqCgYeepadqf 36
                     FC++CgNlL+++++++++   C+qC++++p++qf
      EPX70913.1  8 VFCSECGNLLESTTAQWTT---CDQCQSVYPSSQF 39
                    6*****************9...***********98 PP

  == domain 2  score: 15.6 bits;  conditional E-value: 3.7e-05
                     ESTTTS......BEEEEECSCCCE..EEESSSS-EE CS
  RNA_POL_M_15KD   4 CpkCgN......lLlpkedkegkn..feCrqCgYee 31 
                     CpkCgN       L  ++++eg+   +eC  CgY++
      EPX70913.1  80 CPKCGNdqmtfhTLQLRSADEGSTvfYECPRCGYKF 115
                     *****9886666599999***9999*********98 PP

>> TFIIS_C  Transcription factor S-II (TFIIS)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.1      0.99   2.9e+02      31      36 ..      10      15 ..       7      16 .. 0.62
   2 ?    1.5   0.2      0.92   2.7e+02      30      36 ..      26      32 ..      18      34 .. 0.69
   3 !   61.7   1.1   1.4e-19   4.1e-17       2      38 ..      79     115 ..      78     116 .. 0.97

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.99
     TFIIS_C 31 CtkCgh 36
                C +Cg+
  EPX70913.1 10 CSECGN 15
                666654 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.92
     TFIIS_C 30 kCtkCgh 36
                +C +C+ 
  EPX70913.1 26 TCDQCQS 32
                5666665 PP

  == domain 3  score: 61.7 bits;  conditional E-value: 1.4e-19
     TFIIS_C   2 kCpkCgsreayffqlQtRsaDEpmtvfykCtkCghrW 38 
                 kCpkCg+++++f +lQ+RsaDE++tvfy+C  Cg+++
  EPX70913.1  79 KCPKCGNDQMTFHTLQLRSADEGSTVFYECPRCGYKF 115
                 8**********************************98 PP

>> zf-ribbon_3  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.9   3.4e-05      0.01       3      24 ..       8      32 ..       6      33 .. 0.84
   2 !    9.8   0.3    0.0018      0.53      17      25 ..      78      86 ..      75      87 .. 0.67
   3 ?    7.0   0.2     0.013         4       3       9 ..     106     112 ..     104     116 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 3.4e-05
  zf-ribbon_3  3 vrCPnCGa.p..lssddnvCpyCGt 24
                 v+C++CG+ +   ++++++C  C++
   EPX70913.1  8 VFCSECGNlLesTTAQWTTCDQCQS 32
                 89******77777889*******86 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.0018
  zf-ribbon_3 17 nvCpyCGtk 25
                  +Cp+CG +
   EPX70913.1 78 EKCPKCGND 86
                 567777765 PP

  == domain 3  score: 7.0 bits;  conditional E-value: 0.013
  zf-ribbon_3   3 vrCPnCG 9  
                  ++CP+CG
   EPX70913.1 106 YECPRCG 112
                  5677777 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.9   8.8e-06    0.0026      14      40 ..       9      36 ..       5      41 .. 0.85
   2 !   12.6   1.2   0.00035      0.11      13      41 ..      78     118 ..      69     119 .] 0.78

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 8.8e-06
         DZR 14 fCseCgtklkavaa.edrCpsCgekvdp 40
                fCseCg+ l++++a  ++C++C++  ++
  EPX70913.1  9 FCSECGNLLESTTAqWTTCDQCQSVYPS 36
                9********9888889******997654 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 0.00035
         DZR  13 rfCseCgtklkavaa............edrCpsCgekvdpe 41 
                 + C++Cg++     +             + Cp+Cg+k + +
  EPX70913.1  78 EKCPKCGNDQMTFHTlqlrsadegstvFYECPRCGYKFSTN 118
                 67******965444467777799*************97655 PP

>> C1_1  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.5   3.5e-06    0.0011      12      38 ..       8      34 ..       3      42 .. 0.90
   2 ?    3.5   0.4      0.22        66      13      38 ..      79     115 ..      70     117 .. 0.72

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 3.5e-06
                -B-TTT-SB--SSSS-EEEETTT--EE CS
        C1_1 12 tfCkhCgeflwgkekqglkCswCkllv 38
                 fC++Cg++l+    q+ +C++C+ ++
  EPX70913.1  8 VFCSECGNLLESTTAQWTTCDQCQSVY 34
                79********77***********9876 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.22
                 B-TTT-SB-...........-SSSS-EEEETTT--EE CS
        C1_1  13 fCkhCgefl...........wgkekqglkCswCkllv 38 
                 +C +Cg+              +++++ + C  C++++
  EPX70913.1  79 KCPKCGNDQmtfhtlqlrsaDEGSTVFYECPRCGYKF 115
                 6777766555667777776444788889999999875 PP

>> zinc_ribbon_4  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0      0.16        47      23      34 ..       5      16 ..       1      18 [. 0.80
   2 ?    6.6   0.2     0.025       7.6       3      12 ..      25      34 ..      24      35 .. 0.90
   3 ?    5.5   0.1     0.056        17      27      33 ..      79      85 ..      65      86 .. 0.82
   4 ?    6.1   0.3     0.035        11       4      12 ..     107     115 ..     103     117 .. 0.69

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.16
  zinc_ribbon_4 23 gvkvrCskCghv 34
                   g+ v Cs Cg++
     EPX70913.1  5 GSLVFCSECGNL 16
                   67788****986 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.025
  zinc_ribbon_4  3 itCpsCkaky 12
                   +tC +C+++y
     EPX70913.1 25 TTCDQCQSVY 34
                   59*****999 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.056
  zinc_ribbon_4 27 rCskCgh 33
                   +C+kCg+
     EPX70913.1 79 KCPKCGN 85
                   8999996 PP

  == domain 4  score: 6.1 bits;  conditional E-value: 0.035
  zinc_ribbon_4   4 tCpsCkaky 12 
                    +Cp+C+ k+
     EPX70913.1 107 ECPRCGYKF 115
                    466666655 PP

>> HypA  Hydrogenase/urease nickel incorporation, metallochaperone, hypA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.4    0.0012      0.37      71      95 ..       8      33 ..       2      49 .. 0.83
   2 ?    7.6   2.1     0.012       3.7      68      99 ..      75      90 ..      55     118 .. 0.53

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.0012
                EEETTTS-EEECHH.HHHS-TTTSSS CS
        HypA 71 vrCreCgkefelee.kalrCpkCgsa 95
                v C+eCg+  e+++ + ++C +C+s 
  EPX70913.1  8 VFCSECGNLLESTTaQWTTCDQCQSV 33
                78********977634678****985 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.012
                --EEEETTTS-EEECHHHHHS-TTTSSS-EEE CS
        HypA 68 pvkvrCreCgkefeleekalrCpkCgsadvei 99
                 +  +C +Cg                + ++++
  EPX70913.1 75 TIDEKCPKCG----------------NDQMTF 90
                2333455555................544443 PP

>> zf-TFIIB  Transcription factor zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   1.4       0.1        30       2      23 ..      10      31 ..      10      32 .. 0.92
   2 !   17.0   1.1   9.3e-06    0.0028       1      26 [.      79     112 ..      79     112 .. 0.79

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.1
    zf-TFIIB  2 CPkCqdeleeserggveidyCp 23
                C  C++ le +  +  ++d+C 
  EPX70913.1 10 CSECGNLLESTTAQWTTCDQCQ 31
                999*****************96 PP

  == domain 2  score: 17.0 bits;  conditional E-value: 9.3e-06
    zf-TFIIB   1 kCPkCqd.ele..eser.....ggveidyCpqCr 26 
                 kCPkC++ +++  ++++     g   ++ Cp+C+
  EPX70913.1  79 KCPKCGNdQMTfhTLQLrsadeGSTVFYECPRCG 112
                 8****864899874444668868899999****7 PP

>> zf_UBZ  Ubiquitin-Binding Zinc Finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.1     0.023       6.8       3      15 ..       8      20 ..       6      23 .. 0.79
   2 !    7.8   0.3    0.0085       2.5       3      17 ..      25      39 ..      23      40 .. 0.86
   3 ?    2.3   0.7      0.44   1.3e+02       4       9 ..      79      84 ..      77      86 .. 0.85
   4 !    7.8   0.1    0.0079       2.4       3      14 ..     106     117 ..     104     119 .] 0.84

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.023
      zf_UBZ  3 ylCerCgkeipes 15
                ++C++Cg  ++++
  EPX70913.1  8 VFCSECGNLLEST 20
                79*****987765 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0085
      zf_UBZ  3 ylCerCgkeipesel 17
                 +C++C++  p+s++
  EPX70913.1 25 TTCDQCQSVYPSSQF 39
                59*********9986 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.44
      zf_UBZ  4 lCerCg 9 
                 C++Cg
  EPX70913.1 79 KCPKCG 84
                6****9 PP

  == domain 4  score: 7.8 bits;  conditional E-value: 0.0079
      zf_UBZ   3 ylCerCgkeipe 14 
                 y C+rCg ++++
  EPX70913.1 106 YECPRCGYKFST 117
                 89*****88875 PP

>> zinc_ribbon_2  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   1.6    0.0054       1.6       1      13 [.       9      21 ..       9      30 .. 0.71
   2 !    8.0   1.6    0.0083       2.5       1       7 [.      79      85 ..      79      86 .. 0.84
   3 !    8.1   0.5    0.0075       2.3      16      22 ..     108     114 ..     100     115 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0054
  zinc_ribbon_2  1 fCpnCGaelqdna 13
                   fC++CG+ l+ + 
     EPX70913.1  9 FCSECGNLLESTT 21
                   8999999998765 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0083
  zinc_ribbon_2  1 fCpnCGa 7 
                   +Cp+CG+
     EPX70913.1 79 KCPKCGN 85
                   7999998 PP

  == domain 3  score: 8.1 bits;  conditional E-value: 0.0075
  zinc_ribbon_2  16 CpyCGtp 22 
                    Cp+CG++
     EPX70913.1 108 CPRCGYK 114
                    8888876 PP

>> zf-RING_7  C4-type zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.0     0.029       8.7      21      30 ..       5      14 ..       2      17 .. 0.83
   2 ?    4.3   0.1      0.16        48      24      30 ..      25      31 ..      20      33 .. 0.86
   3 ?    1.8   0.1      0.91   2.7e+02      25      30 ..      79      84 ..      61      84 .. 0.80
   4 ?    3.1   0.0      0.38   1.1e+02      18      30 ..      96     112 ..      92     112 .. 0.66

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.029
                TB-EE-TTT- CS
   zf-RING_7 21 devvtCpeCG 30
                + +v+C eCG
  EPX70913.1  5 GSLVFCSECG 14
                569******9 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.16
                EE-TTT- CS
   zf-RING_7 24 vtCpeCG 30
                 tC++C+
  EPX70913.1 25 TTCDQCQ 31
                59****8 PP

  == domain 3  score: 1.8 bits;  conditional E-value: 0.91
                E-TTT- CS
   zf-RING_7 25 tCpeCG 30
                +Cp CG
  EPX70913.1 79 KCPKCG 84
                7****9 PP

  == domain 4  score: 3.1 bits;  conditional E-value: 0.38
                 CCSTB....-EE-TTT- CS
   zf-RING_7  18 ragde....vvtCpeCG 30 
                 r +de       Cp CG
  EPX70913.1  96 RSADEgstvFYECPRCG 112
                 555444443689****9 PP

>> Zn_Tnp_IS1595  Transposase zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.3      0.11        34      20      44 ..       9      31 ..       5      33 .. 0.64
   2 ?   12.1   2.9    0.0005      0.15      20      45 ..      79     113 ..      73     114 .. 0.79

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.11
  Zn_Tnp_IS1595 20 vCPhCgsrkayriktrglfqCkeCr 44
                    C  Cg+    + +t++   C  C+
     EPX70913.1  9 FCSECGNL--LESTTAQWTTCDQCQ 31
                   499***55..444443445677776 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 0.0005
  Zn_Tnp_IS1595  20 vCPhCgsr....kayrikt.........rglfqCkeCrk 45 
                     CP+Cg++    +    +             ++C +C++
     EPX70913.1  79 KCPKCGNDqmtfH----TLqlrsadegsTVFYECPRCGY 113
                    5*******65333....3344669*999999******97 PP

>> Ogr_Delta  Ogr/Delta-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   1.7         5   1.5e+03       2      13 ..      10      21 ..       9      34 .. 0.59
   2 ?   15.2   0.9   5.1e-05     0.015       1      40 [.      79     118 ..      79     119 .] 0.83

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 5
   Ogr_Delta  2 CPhCgapaaart 13
                C +Cg+    +t
  EPX70913.1 10 CSECGNLLESTT 21
                777776544444 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 5.1e-05
   Ogr_Delta   1 rCPhCgapaaartsrnlsk..dvreryyqCsnfeCgatfvaa 40 
                 +CP+Cg+   + ++ +l     +  ++y+C    Cg++f ++
  EPX70913.1  79 KCPKCGNDQMTFHTLQLRSadEGSTVFYECPR--CGYKFSTN 118
                 6*******99999999865113555*******..*****997 PP

>> TF_Zn_Ribbon  TFIIB zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.1    0.0069       2.1      21      31 ..       9      19 ..       5      23 .. 0.86
   2 ?   -1.8   0.2         8   2.4e+03      21      26 ..      26      31 ..      25      35 .. 0.56
   3 ?   11.5   3.2   0.00054      0.16       2      29 ..      79     115 ..      78     119 .] 0.76

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0069
                  EESSSSBEEEE CS
  TF_Zn_Ribbon 21 vCtdCGlVled 31
                  +C++CG++le 
    EPX70913.1  9 FCSECGNLLES 19
                  7*******995 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 8
                  EESSSS CS
  TF_Zn_Ribbon 21 vCtdCG 26
                  +C  C 
    EPX70913.1 26 TCDQCQ 31
                  566663 PP

  == domain 3  score: 11.5 bits;  conditional E-value: 0.00054
                   EETTTTCEE.C.....HEETSTTCEE...ESSSSBEE CS
  TF_Zn_Ribbon   2 kCPnCgstn.l.....veDpergelv...CtdCGlVl 29 
                   kCP+Cg+++ +     ++ +++g +v   C++CG+  
    EPX70913.1  79 KCPKCGNDQmTfhtlqLRSADEGSTVfyeCPRCGYKF 115
                   8******9955999996666666665556*****875 PP

>> RecR  RecR protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.6   8.6e-05     0.026      16      36 ..       7      32 ..       2      33 .. 0.80
   2 ?    2.6   0.1      0.35     1e+02      18      24 ..      79      85 ..      75      87 .. 0.86
   3 ?    0.7   0.2       1.3   3.9e+02      18      23 ..     107     112 ..     105     114 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 8.6e-05
                -EE-TTT--EESSS.....S-CCCCS CS
        RecR 16 vrhCsrCgnlteed.....lCaICsd 36
                + +Cs+Cgnl e++      C+ C++
  EPX70913.1  7 LVFCSECGNLLESTtaqwtTCDQCQS 32
                679*******7777566778****86 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.35
                E-TTT-- CS
        RecR 18 hCsrCgn 24
                 C++Cgn
  EPX70913.1 79 KCPKCGN 85
                6999998 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 1.3
                 E-TTT- CS
        RecR  18 hCsrCg 23 
                  C+rCg
  EPX70913.1 107 ECPRCG 112
                 6****8 PP

>> Baculo_LEF5_C  Baculoviridae late expression factor 5 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.2       3.3   9.8e+02      36      41 ..       9      14 ..       4      15 .. 0.84
   2 ?    6.3   0.1     0.026       7.8      15      41 ..      61      84 ..      58      85 .. 0.85
   3 ?    9.4   0.0    0.0028      0.84      23      41 ..      94     112 ..      90     113 .. 0.94

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 3.3
  Baculo_LEF5_C 36 yCskCg 41
                    Cs Cg
     EPX70913.1  9 FCSECG 14
                   6****9 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.026
  Baculo_LEF5_C 15 HdfvtiEiQnRagDEivsfvryCskCg 41
                   H  v +E Q     E++ +   C kCg
     EPX70913.1 61 HSIVQVETQK---EEAATIDEKCPKCG 84
                   7777888886...7************9 PP

  == domain 3  score: 9.4 bits;  conditional E-value: 0.0028
  Baculo_LEF5_C  23 QnRagDEivsfvryCskCg 41 
                    Q+R+ DE   +   C +Cg
     EPX70913.1  94 QLRSADEGSTVFYECPRCG 112
                    9*****************9 PP

>> Terminase_GpA  Phage terminase large subunit (GpA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1       2.8   8.5e+02     207     211 ..      16      20 ..       7      53 .. 0.55
   2 ?   12.5   0.2   0.00013     0.039     200     236 ..      79     114 ..      54     119 .] 0.88

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 2.8
  Terminase_GpA 207 lqels 211
                    l e +
     EPX70913.1  16 LLEST 20 
                    33322 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 0.00013
  Terminase_GpA 200 pCphCgelqelsferlkwpegeaeekaryvCphcgsl 236
                    +Cp+Cg+ q ++f++l+  + ++ +++ y Cp cg  
     EPX70913.1  79 KCPKCGNDQ-MTFHTLQLRSADEGSTVFYECPRCGYK 114
                    7*****976.7899999977779***********975 PP

>> OrfB_Zn_ribbon  Putative transposase DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.8    0.0052       1.6      31      55 ..      10      33 ..       6      38 .. 0.91
   2 ?    8.4   2.4    0.0067         2      29      56 ..      78     115 ..      53     118 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0052
  OrfB_Zn_ribbon 31 CseCgsknkealsgrtfkCpnCgfe 55
                    CseCg  ++   + ++ +C++C+ +
      EPX70913.1 10 CSECGNLLES-TTAQWTTCDQCQSV 33
                    **********.999999*****876 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.0067
  OrfB_Zn_ribbon  29 ktCseCgsknke..........alsgrtfkCpnCgfea 56 
                      +C++Cg  + +          + s+  ++Cp+Cg+++
      EPX70913.1  78 EKCPKCGNDQMTfhtlqlrsadEGSTVFYECPRCGYKF 115
                     68*****99999999999886555555689*****986 PP

>> zf-FPG_IleRS  Zinc finger found in FPG and IleRS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   1.2    0.0058       1.7       4      30 .]      10      33 ..       9      33 .. 0.94
   2 ?    7.1   0.5     0.017       5.1       2       9 ..      78      85 ..      77      86 .. 0.91
   3 ?    4.7   0.2     0.093        28       4       8 ..     108     112 ..     107     117 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0058
                  -TTT--BBEEEECTTEEEEE-TTTT.. CS
  zf-FPG_IleRS  4 CpRCwryiervgqagrstyfCprCqkv 30
                  C  C++ +e++       + C++Cq+v
    EPX70913.1 10 CSECGNLLESTTA---QWTTCDQCQSV 33
                  999**********...*********86 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.017
                  SB-TTT-- CS
  zf-FPG_IleRS  2 epCpRCwr 9 
                  e+Cp C++
    EPX70913.1 78 EKCPKCGN 85
                  9******8 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.093
                   -TTT- CS
  zf-FPG_IleRS   4 CpRCw 8  
                   CpRC+
    EPX70913.1 108 CPRCG 112
                   88987 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.1       7.3   2.2e+03      16      21 ..       9      14 ..       6      15 .. 0.81
   2 ?   -0.7   0.2       7.9   2.4e+03      16      22 ..      26      32 ..      26      34 .. 0.76
   3 ?    3.6   0.0      0.35     1e+02      16      21 ..      79      84 ..      57      86 .. 0.84
   4 ?   13.9   0.1   0.00019     0.058      14      26 .]     105     117 ..      88     117 .. 0.73

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 7.3
   zf-H2C2_2 16 eCplCd 21
                 C++C+
  EPX70913.1  9 FCSECG 14
                599996 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 7.9
   zf-H2C2_2 16 eCplCdk 22
                +C+ C  
  EPX70913.1 26 TCDQCQS 32
                6****75 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.35
   zf-H2C2_2 16 eCplCd 21
                +Cp+C+
  EPX70913.1 79 KCPKCG 84
                8****7 PP

  == domain 4  score: 13.9 bits;  conditional E-value: 0.00019
   zf-H2C2_2  14 pyeCplCdkaFkt 26 
                 +yeCp C+++F+t
  EPX70913.1 105 FYECPRCGYKFST 117
                 49*********86 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.2    0.0039       1.2      21      47 ..       5      34 ..       1      37 [. 0.85
   2 ?    2.8   0.1      0.37   1.1e+02      37      45 ..      77      85 ..      69      90 .. 0.77
   3 ?    0.2   0.0       2.3     7e+02      39      44 ..     107     112 ..      99     117 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.0039
                EEEEE-HHHHHHHHH...TT-B-TTT--B- CS
  zf-C3HC4_3 21 gHlvlCeeCaekllk...rkkkCpiCrrpi 47
                g lv+C+eC + l++   + ++C  C++ +
  EPX70913.1  5 GSLVFCSECGNLLESttaQWTTCDQCQSVY 34
                6689*********98999999999999866 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.37
                T-B-TTT-- CS
  zf-C3HC4_3 37 kkkCpiCrr 45
                ++kCp C  
  EPX70913.1 77 DEKCPKCGN 85
                678999965 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 2.3
                 B-TTT- CS
  zf-C3HC4_3  39 kCpiCr 44 
                 +Cp C 
  EPX70913.1 107 ECPRCG 112
                 677775 PP

>> Ribosomal_S27e  Ribosomal protein S27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.1      0.18        53      25      36 ..       6      17 ..       2      22 .. 0.81
   2 ?    1.4   2.0       0.9   2.7e+02      27      36 ..       8      17 ..       7      38 .. 0.66
   3 ?   12.3   0.1   0.00035       0.1       8      21 ..      78      91 ..      73      97 .. 0.87
   4 ?   -1.0   0.0       4.8   1.4e+03       9      14 ..     107     112 ..      99     116 .. 0.72

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.18
                    S-EEESSSTCEE CS
  Ribosomal_S27e 25 tvvkCisCgkvL 36
                    + v C  Cg+ L
      EPX70913.1  6 SLVFCSECGNLL 17
                    579999999987 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.9
                    EEESSSTCEE CS
  Ribosomal_S27e 27 vkCisCgkvL 36
                    v C  Cg+ L
      EPX70913.1  8 VFCSECGNLL 17
                    5566666655 PP

  == domain 3  score: 12.3 bits;  conditional E-value: 0.00035
                    EE-TTTS-EEEEES CS
  Ribosomal_S27e  8 vkCpdCenetvvFs 21
                     kCp+C+n +++F 
      EPX70913.1 78 EKCPKCGNDQMTFH 91
                    59***********7 PP

  == domain 4  score: -1.0 bits;  conditional E-value: 4.8
                     E-TTTS CS
  Ribosomal_S27e   9 kCpdCe 14 
                      Cp C+
      EPX70913.1 107 ECPRCG 112
                     466665 PP

>> CNP1  CNP1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   0.00034       0.1      24      73 ..      63     112 ..      37     117 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00034
        CNP1  24 efdvsaasqlkfavDaksisvgkdgvvRYtlvitsksGarnvsyeGirCa 73 
                  ++v+++++    +D+k  + g+d++  +tl  +s++  + v ye  rC 
  EPX70913.1  63 IVQVETQKEEAATIDEKCPKCGNDQMTFHTLQLRSADEGSTVFYECPRCG 112
                 36777899999**************************************6 PP

>> Stc1  Stc1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.7   0.00067       0.2      39      74 ..       7      46 ..       1      53 [. 0.73
   2 ?    5.2   1.2       0.1        31      22      59 ..      59     112 ..      49     118 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00067
                ----TTTS-----E....EE-SSS--EEESTTS-HHHHHS CS
        Stc1 39 kikCkectakqate....leCsaCqktkpldeFsksqrrk 74
                 + C+ec +          +C+ Cq + p ++F++   ++
  EPX70913.1  7 LVFCSECGNLLESTtaqwTTCDQCQSVYPSSQFANLAVET 46
                5779999764222234449***************976655 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.1
                 TTTEEEE-.S-.......----TTTS-----E...............EE-SSS- CS
        Stc1  22 lekklaee.kakvkkakskikCkectakqate...............leCsaCq 59 
                 l++++ +   +k ++a+   kC +c ++q t                 eC  C+
  EPX70913.1  59 LKHSIVQVeTQKEEAATIDEKCPKCGNDQMTFhtlqlrsadegstvfYECPRCG 112
                 455555554566667777999****99999887888888888888888888885 PP

>> Nudix_N_2  Nudix N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   2.9      0.02       5.9       2      14 ..       9      21 ..       9      34 .. 0.71
   2 ?    5.6   1.3     0.052        15       3      30 ..      80     113 ..      80     115 .. 0.67

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.02
                B-TTT--B-EEE- CS
   Nudix_N_2  2 FCsqCGtpvelri 14
                FCs+CG+ +e  +
  EPX70913.1  9 FCSECGNLLESTT 21
                9******998766 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.052
                 -TTT--B.-E.....EE--TT-SS-EEEETTTTE CS
   Nudix_N_2   3 CsqCGtp.ve.....lripdgDnreRlvCpaCgt 30 
                 C++CG+  ++     lr  d+++   + Cp+Cg+
  EPX70913.1  80 CPKCGNDqMTfhtlqLRSADEGSTVFYECPRCGY 113
                 9999964333333337777788888888888886 PP

>> zf-MYND  MYND finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   1.5    0.0041       1.2       1      20 [.      10      34 ..      10      37 .. 0.81
   2 ?    5.2   0.3     0.078        23       1      16 [.      80     111 ..      66     115 .. 0.52

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.0041
                -TTT--....B-SC..E-TTTS-SE CS
     zf-MYND  1 CavCgk...aealk..kCagCksvf 20
                C+ Cg+   +  ++   C +C+sv+
  EPX70913.1 10 CSECGNlleSTTAQwtTCDQCQSVY 34
                99****9974444467******996 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.078
                 -TTT--.................B-SC...E-TTT CS
     zf-MYND   1 CavCgk................aealk...kCagC 16 
                 C +Cg+                +   +    C++C
  EPX70913.1  80 CPKCGNdqmtfhtlqlrsadegS---TvfyECPRC 111
                 44555555555555554442111...123455555 PP

>> DUF3797  Domain of unknown function (DUF3797)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0      0.66     2e+02      14      21 ..       8      15 ..       5      17 .. 0.87
   2 ?   -0.5   0.0       3.9   1.2e+03      12      34 ..      23      45 ..      19      48 .. 0.72
   3 ?    9.1   0.5    0.0041       1.2      15      24 ..      79      88 ..      72     100 .. 0.89
   4 ?    3.6   0.4       0.2        61      13      22 ..     105     114 ..      91     119 .] 0.76

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.66
     DUF3797 14 vqCPeCgN 21
                v C eCgN
  EPX70913.1  8 VFCSECGN 15
                78*****9 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 3.9
     DUF3797 12 kYvqCPeCgNnkvlNsegkviie 34
                ++  C +C+  +     +++ +e
  EPX70913.1 23 QWTTCDQCQSVYPSSQFANLAVE 45
                67889999887766666666665 PP

  == domain 3  score: 9.1 bits;  conditional E-value: 0.0041
     DUF3797 15 qCPeCgNnkv 24
                +CP+CgN+++
  EPX70913.1 79 KCPKCGNDQM 88
                6******986 PP

  == domain 4  score: 3.6 bits;  conditional E-value: 0.2
     DUF3797  13 YvqCPeCgNn 22 
                 +  CP Cg +
  EPX70913.1 105 FYECPRCGYK 114
                 678****965 PP

>> Lar_restr_allev  Restriction alleviation protein Lar
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   1.3     0.062        18       8      38 ..       9      34 ..       3      49 .. 0.76
   2 ?   10.3   2.4    0.0024       0.7       5      36 ..      79     113 ..      78     119 .] 0.74

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.062
  Lar_restr_allev  8 fCggravlersqrvvaeigqcvyCadCgast 38
                     fC + + l +s+  +     + +C++C  + 
       EPX70913.1  9 FCSECGNLLESTTAQ-----WTTCDQCQSVY 34
                     888888888887777.....99999999833 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.0024
  Lar_restr_allev   5 pCPfCggravlersqrvvaeigq...cvyCadCga 36 
                       CP Cg+++  +++ + ++  +    + +C  Cg+
       EPX70913.1  79 KCPKCGNDQMTFHTLQLRSADEGstvFYECPRCGY 113
                      6******9988887665554444688999*****9 PP

>> RNHCP  RNHCP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   3.4     0.017         5       5      75 ..       9      86 ..       6      92 .. 0.66
   2 ?    3.2   0.0       0.3        89      59      74 ..      98     113 ..      87     119 .] 0.70

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.017
       RNHCP  5 tCeeCgkeveklaagsakrnHCpsCLlskH.....vdeepgdraseCkglme..piavevkkkkewvivhrCekCgel 75
                 C+eCg+ +e ++a+ ++ + C s   s       v+++ g  a     +++   ++ve++k++  +i  +C kCg+ 
  EPX70913.1  9 FCSECGNLLESTTAQWTTCDQCQSVYPSSQfanlaVETKSGPNAFPSALKLKhsIVQVETQKEEAATIDEKCPKCGND 86
                5999999999888888888888877766551111133444444433333343115889999999999********975 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.3
       RNHCP  59 kkkewvivhrCekCge 74 
                 ++++ ++ ++C +Cg 
  EPX70913.1  98 ADEGSTVFYECPRCGY 113
                 4566788999999985 PP

>> tRNA-synt_1f  tRNA synthetases class I (K)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.7    0.0013      0.38     159     209 ..      64     115 ..       9     118 .. 0.73

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.0013
  tRNA-synt_1f 159 ekyrgeereetyspylpvcekcgrvdttevvevd....aeeeeieYkceecGeee 209
                    ++  e ++e+   +   c+kcg  d+++   ++    +e++++ Y+c +cG++ 
    EPX70913.1  64 VQV--ETQKEEAATIDEKCPKCGN-DQMTFHTLQlrsaDEGSTVFYECPRCGYKF 115
                   444..3455667778888999998.55554433211114999**********986 PP

>> zf-AN1  AN1-like Zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   1.2     0.025       7.4       1      23 [.      10      34 ..      10      36 .. 0.78
   2 ?    2.5   0.1      0.56   1.7e+02      14      21 ..      78      85 ..      67      87 .. 0.75
   3 ?    5.9   0.1      0.05        15      12      23 ..     104     115 ..      96     116 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.025
      zf-AN1  1 CsfksCkkkd..flp...fkCryCgkvF 23
                Cs  +C++++  +      +C++C+ v+
  EPX70913.1 10 CS--ECGNLLesT-TaqwTTCDQCQSVY 34
                77..699999542.25789******998 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.56
      zf-AN1 14 fkCryCgk 21
                 kC++Cg+
  EPX70913.1 78 EKCPKCGN 85
                59****97 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.05
      zf-AN1  12 lpfkCryCgkvF 23 
                 + ++C++Cg +F
  EPX70913.1 104 VFYECPRCGYKF 115
                 449******998 PP

>> Zn-ribbon_8  Zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   1.7     0.039        12       8      34 ..      10      32 ..       8      38 .. 0.78
   2 ?    7.4   0.7     0.015       4.6      26      34 ..      77      85 ..      64      89 .. 0.68
   3 ?    6.3   0.9     0.034        10       6      16 ..     106     116 ..     105     118 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.039
  Zn-ribbon_8  8 CeeCghefevlqsisdapltaCPeCgs 34
                 C eCg+  e       a  t+C +C+s
   EPX70913.1 10 CSECGNLLEST----TAQWTTCDQCQS 32
                 9****888833....345788****87 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.015
  Zn-ribbon_8 26 ltaCPeCgs 34
                 +++CP+Cg 
   EPX70913.1 77 DEKCPKCGN 85
                 456****97 PP

  == domain 3  score: 6.3 bits;  conditional E-value: 0.034
  Zn-ribbon_8   6 YrCeeCghefe 16 
                  Y+C +Cg +f 
   EPX70913.1 106 YECPRCGYKFS 116
                  99999999985 PP

>> zf-Mss51  Zinc-finger of mitochondrial splicing suppressor 51
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   1.1       3.5   1.1e+03      19      34 ..      10      25 ..       7      35 .. 0.73
   2 ?    5.6   0.4     0.056        17       8      23 ..      69      84 ..      55      91 .. 0.84
   3 ?   12.3   3.2   0.00045      0.14       1      24 [.      79     113 ..      79     118 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 3.5
    zf-Mss51 19 CpdCGiptycseehwe 34
                C +CG     + ++w 
  EPX70913.1 10 CSECGNLLESTTAQWT 25
                8888877777777775 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.056
    zf-Mss51  8 kqtapkhvdfeCpdCG 23
                ++++ + +d +Cp+CG
  EPX70913.1 69 QKEEAATIDEKCPKCG 84
                4457899999*****9 PP

  == domain 3  score: 12.3 bits;  conditional E-value: 0.00045
    zf-Mss51   1 lCPvpkhkqt...........apkhvdfeCpdCGi 24 
                 +CP + ++q            + + v +eCp+CG+
  EPX70913.1  79 KCPKCGNDQMtfhtlqlrsadEGSTVFYECPRCGY 113
                 59999998889999*****999************8 PP

>> zinc_ribbon_15  zinc-ribbon family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8  11.6       1.3     4e+02      35      74 ..      22      86 ..       5     119 .] 0.81

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 1.3
  zinc_ribbon_15 35 kpylacskCkslleaskelgkeiekkesse.........................kkeCknCgke 74
                     +  +c++C+s++++s+  + ++e+k+  +                          ++C++Cg+ 
      EPX70913.1 22 AQWTTCDQCQSVYPSSQFANLAVETKSGPNafpsalklkhsivqvetqkeeaatiDEKCPKCGND 86
                    56778999999999998777777777776689999999999999999999999998888888864 PP

>> DUF2072  Zn-ribbon containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.3      0.66     2e+02       4      25 ..      10      30 ..       9      53 .. 0.83
   2 ?    7.8   0.1     0.012       3.7       7      32 ..      66      90 ..      60     102 .. 0.72
   3 ?    2.7   0.1      0.49   1.4e+02      13      28 ..     100     114 ..      94     117 .. 0.75

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.66
     DUF2072  4 CtkCekvfedgskeilkGCpsC 25
                C +C++++e+ ++   + C +C
  EPX70913.1 10 CSECGNLLESTTA-QWTTCDQC 30
                9999999998887.45668777 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.012
     DUF2072  7 CekvfedgskeilkGCpsCGgkkFly 32
                 e+  e++++ i + Cp+CG  + ++
  EPX70913.1 66 VETQKEEAAT-IDEKCPKCGNDQMTF 90
                5555566665.*********999887 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.49
     DUF2072  13 dgskeilkGCpsCGgk 28 
                 +gs+ +   Cp CG k
  EPX70913.1 100 EGST-VFYECPRCGYK 114
                 4555.7778*****86 PP

>> PADR1  PADR1 (NUC008) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   3.7       0.9   2.7e+02       9      21 ..       3      15 ..       1      34 [. 0.75
   2 ?    0.7   0.5       1.5   4.6e+02      15      20 ..      26      31 ..      22      40 .. 0.61
   3 ?    8.8   0.1    0.0047       1.4      14      27 ..      78      91 ..      77      95 .. 0.89
   4 ?    1.9   0.1      0.67     2e+02      15      23 ..     107     114 ..     104     119 .] 0.69

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.9
       PADR1  9 lfGalekCpeCke 21
                + G+l  C+eC++
  EPX70913.1  3 AIGSLVFCSECGN 15
                6799999999994 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 1.5
       PADR1 15 kCpeCk 20
                 C +C+
  EPX70913.1 26 TCDQCQ 31
                466665 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.0047
       PADR1 14 ekCpeCkegqlvfd 27
                ekCp+C++ q+ f+
  EPX70913.1 78 EKCPKCGNDQMTFH 91
                79*******99997 PP

  == domain 4  score: 1.9 bits;  conditional E-value: 0.67
       PADR1  15 kCpeCkegq 23 
                 +Cp C+  +
  EPX70913.1 107 ECPRCG-YK 114
                 8****9.43 PP

>> Rpr2  RNAse P Rpr2/Rpp21/SNM1 subunit domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.2       1.6   4.6e+02      47      55 ..       9      17 ..       6      21 .. 0.85
   2 ?    9.7   2.1    0.0034         1      44      90 .]      23     112 ..      17     112 .. 0.76

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 1.6
                B-TTT--B- CS
        Rpr2 47 vCkkCgsvl 55
                +C++Cg++l
  EPX70913.1  9 FCSECGNLL 17
                8*****998 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.0034
                 CCTB-TTT--B--CTTTEEEEEE-SSS-E......................................................EEEEETTTT CS
        Rpr2  44 krtvCkkCgsvlipgvtcsvrvenkskkkkkkkkka.............................................dvlvvtClaCg 90 
                 + t+C +C+sv+ + + +++ ve ks ++    ++a                                              ++ ++C +Cg
  EPX70913.1  23 QWTTCDQCQSVYPSSQFANLAVETKSGPNA--FPSAlklkhsivqvetqkeeaatidekcpkcgndqmtfhtlqlrsadegSTVFYECPRCG 112
                 5689***********999999988777654..333355888888888888888787777777788777787777777777766678888885 PP

>> zf-ISL3  zinc-finger of transposase IS204/IS1001/IS1096/IS1165
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0       1.8   5.3e+02       4      10 ..       9      15 ..       7      21 .. 0.80
   2 ?    0.4   0.1       3.5   1.1e+03       3      11 ..      25      33 ..      23      38 .. 0.83
   3 ?    6.5   0.1     0.046        14       4      16 ..      79      91 ..      77      96 .. 0.83
   4 ?    3.8   0.2       0.3        90       5      11 ..     108     114 ..     106     118 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 1.8
     zf-ISL3  4 rCPnCgs 10
                 C +Cg+
  EPX70913.1  9 FCSECGN 15
                6899986 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 3.5
     zf-ISL3  3 hrCPnCgsk 11
                ++C +C+s+
  EPX70913.1 25 TTCDQCQSV 33
                5899**986 PP

  == domain 3  score: 6.5 bits;  conditional E-value: 0.046
     zf-ISL3  4 rCPnCgsktvvkh 16
                +CP+Cg+  ++ h
  EPX70913.1 79 KCPKCGNDQMTFH 91
                6*****9977665 PP

  == domain 4  score: 3.8 bits;  conditional E-value: 0.3
     zf-ISL3   5 CPnCgsk 11 
                 CP+Cg k
  EPX70913.1 108 CPRCGYK 114
                 ****976 PP

>> zf-C2HC5  Putative zinc finger motif, C2HC5-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.6     0.011       3.2      19      43 ..       9      33 ..       4      43 .. 0.82
   2 ?    2.7   0.1      0.42   1.3e+02      34      44 ..      77      87 ..      68      95 .. 0.69
   3 ?    0.4   0.1       2.2   6.5e+02      35      43 ..     106     114 ..      98     119 .] 0.68

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.011
    zf-C2HC5 19 nClnCGkiiCakeglskpCsfCgsp 43
                 C +CG+ + +  +   +C  C+s 
  EPX70913.1  9 FCSECGNLLESTTAQWTTCDQCQSV 33
                7********9999999******975 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.42
    zf-C2HC5 34 skpCsfCgspl 44
                 ++C+ Cg++ 
  EPX70913.1 77 DEKCPKCGNDQ 87
                37899998765 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 2.2
    zf-C2HC5  35 kpCsfCgsp 43 
                  +C+ Cg +
  EPX70913.1 106 YECPRCGYK 114
                 578888765 PP

>> Zn_ribbon_recom  Recombinase zinc beta ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.4     0.024       7.3       5      18 ..       7      20 ..       5      34 .. 0.78
   2 ?    4.6   1.3      0.15        46       7      32 ..      79     111 ..      79     118 .. 0.69

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.024
  Zn_ribbon_recom  5 llrCgeCGspmtrr 18
                     l++C eCG+ +  +
       EPX70913.1  7 LVFCSECGNLLEST 20
                     89******977665 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.15
  Zn_ribbon_recom   7 rCgeCGsp.mtrrk...rk...gkrhyYrCsty 32 
                      +C +CG+  mt ++   r+   g++  Y C ++
       EPX70913.1  79 KCPKCGNDqMTFHTlqlRSadeGSTVFYECPRC 111
                      599999877888664443345777788888765 PP

>> C1_4  TFIIH C1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   2.4      0.92   2.8e+02      20      35 ..      19      34 ..       8      36 .. 0.78
   2 ?    3.6   0.2      0.27        79      11      34 ..      63      86 ..      55      88 .. 0.73
   3 ?    9.3   0.3    0.0042       1.3       6      35 ..      87     115 ..      83     118 .. 0.76

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.92
        C1_4 20 eltssryrCekCkndF 35
                ++t    +C++C++++
  EPX70913.1 19 STTAQWTTCDQCQSVY 34
                46677789****9987 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.27
        C1_4 11 klakkkkdeeltssryrCekCknd 34
                 ++ ++++ee++++  +C+kC nd
  EPX70913.1 63 IVQVETQKEEAATIDEKCPKCGND 86
                4455566777899999*****875 PP

  == domain 3  score: 9.3 bits;  conditional E-value: 0.0042
        C1_4   6 qkkfpklakkkkdeeltssryrCekCkndF 35 
                 q++f +l+ +++ +e ++++y+C++C  +F
  EPX70913.1  87 QMTFHTLQLRSA-DEGSTVFYECPRCGYKF 115
                 667777777755.578899*******9888 PP

>> YhfH  YhfH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   2.5     0.053        16      16      37 .]      10      30 ..       9      30 .. 0.84
   2 ?    5.3   0.4     0.066        20      15      22 ..      79      86 ..      76      89 .. 0.85
   3 ?    3.3   0.1      0.28        84      15      23 ..     107     115 ..     106     118 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.053
        YhfH 16 CteCGkeieEqaecYgneCekC 37
                C+eCG+ + E   +  ++C++C
  EPX70913.1 10 CSECGNLL-ESTTAQWTTCDQC 30
                *****866.6777888999999 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.066
        YhfH 15 kCteCGke 22
                kC++CG++
  EPX70913.1 79 KCPKCGND 86
                8*****86 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.28
        YhfH  15 kCteCGkei 23 
                 +C+ CG ++
  EPX70913.1 107 ECPRCGYKF 115
                 7*****775 PP

>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.1       4.8   1.4e+03       3       7 ..      10      14 ..       9      23 .. 0.79
   2 ?    1.6   0.1       1.6   4.7e+02       2      12 ..      26      36 ..      25      42 .. 0.81
   3 ?    3.7   0.2      0.32        95       2      10 ..      79      90 ..      79      96 .. 0.76
   4 ?   10.1   1.2     0.003       0.9       1      13 [.     106     118 ..     106     119 .] 0.92

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 4.8
                ETTTT CS
     zf-C2H2  3 CpdCg 7 
                C++Cg
  EPX70913.1 10 CSECG 14
                99998 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 1.6
                EETTTTEEESS CS
     zf-C2H2  2 kCpdCgksFkr 12
                +C+ C  ++++
  EPX70913.1 26 TCDQCQSVYPS 36
                7****988766 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.32
                EETTTT...EEE CS
     zf-C2H2  2 kCpdCg...ksF 10
                kCp+Cg   ++F
  EPX70913.1 79 KCPKCGndqMTF 90
                79***9666666 PP

  == domain 4  score: 10.1 bits;  conditional E-value: 0.003
                 EEETTTTEEESSH CS
     zf-C2H2   1 ykCpdCgksFkrk 13 
                 y+Cp Cg++F+++
  EPX70913.1 106 YECPRCGYKFSTN 118
                 99********996 PP

>> zf-RRN7  Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0      0.15        46      23      30 ..       9      16 ..       7      18 .. 0.76
   2 ?    1.8   0.4      0.68     2e+02       7      12 ..      27      32 ..      25      34 .. 0.64
   3 ?    6.3   0.0     0.025       7.4       5      16 ..      78      89 ..      74      92 .. 0.79
   4 ?   -0.0   0.8       2.4   7.3e+02      24      28 ..     108     112 ..      95     113 .. 0.76

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.15
     zf-RRN7 23 yCrrChtq 30
                +C +C++ 
  EPX70913.1  9 FCSECGNL 16
                89999985 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.68
     zf-RRN7  7 CgvCgc 12
                C++C +
  EPX70913.1 27 CDQCQS 32
                777766 PP

  == domain 3  score: 6.3 bits;  conditional E-value: 0.025
     zf-RRN7  5 ppCgvCgcrsft 16
                + C+ Cg++  t
  EPX70913.1 78 EKCPKCGNDQMT 89
                79******7654 PP

  == domain 4  score: -0.0 bits;  conditional E-value: 2.4
     zf-RRN7  24 CrrCh 28 
                 C rC+
  EPX70913.1 108 CPRCG 112
                 77776 PP

>> zf_C2H2_10  C2H2 type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.2       4.7   1.4e+03       5      13 ..      27      35 ..      26      36 .. 0.83
   2 ?    7.0   0.1     0.014         4       5      19 ..      80      94 ..      78      96 .. 0.74
   3 ?    5.7   0.8     0.036        11       4      11 ..     107     114 ..     105     115 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 4.7
  zf_C2H2_10  5 CPKCqeklP 13
                C  Cq + P
  EPX70913.1 27 CDQCQSVYP 35
                999*99887 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.014
  zf_C2H2_10  5 CPKCqeklPDiDtLQ 19
                CPKC+       tLQ
  EPX70913.1 80 CPKCGNDQMTFHTLQ 94
                ****98666666665 PP

  == domain 3  score: 5.7 bits;  conditional E-value: 0.036
  zf_C2H2_10   4 sCPKCqek 11 
                  CP+C++k
  EPX70913.1 107 ECPRCGYK 114
                 6******7 PP

>> zinc_ribbon_9  zinc-ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   3.3       5.5   1.6e+03       4      28 ..       9      31 ..       6      34 .. 0.48
   2 ?    6.6   0.1     0.031       9.3      20      29 ..      77      85 ..      63      86 .. 0.61
   3 ?    4.7   0.1      0.12        36      23      31 ..     107     115 ..      91     115 .. 0.71

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 5.5
  zinc_ribbon_9  4 WChqCdrfVsvspdedsd.vlCPhCg 28
                   +C +C + ++   +++++ ++C +C+
     EPX70913.1  9 FCSECGNLLE---STTAQwTTCDQCQ 31
                   4445543333...2233324577776 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.031
  zinc_ribbon_9 20 sdvlCPhCgg 29
                   +++ CP Cg+
     EPX70913.1 77 DEK-CPKCGN 85
                   335.****98 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.12
  zinc_ribbon_9  23 lCPhCgggF 31 
                     CP+Cg  F
     EPX70913.1 107 ECPRCGYKF 115
                    4****9777 PP

>> zf-C4_Topoisom  Topoisomerase DNA binding C4 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.1       1.2   3.5e+02       4      11 ..      10      17 ..       8      20 .. 0.86
   2 ?    1.0   0.1       1.2   3.7e+02       3       9 ..      26      32 ..      25      34 .. 0.84
   3 ?    4.3   8.0      0.12        36       1      11 [.      77      88 ..      77     111 .. 0.71
   4 ?    3.1   0.8      0.27        81       3       9 ..     107     113 ..     105     117 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 1.2
                    -SSS--EE CS
  zf-C4_Topoisom  4 CPkCggdL 11
                    C +Cg+ L
      EPX70913.1 10 CSECGNLL 17
                    99***987 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 1.2
                    E-SSS-- CS
  zf-C4_Topoisom  3 kCPkCgg 9 
                    +C++C +
      EPX70913.1 26 TCDQCQS 32
                    7****75 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.12
                    -EE-SSS-.-EE CS
  zf-C4_Topoisom  1 vekCPkCg.gdL 11
                    +ekCPkCg +++
      EPX70913.1 77 DEKCPKCGnDQM 88
                    58******6655 PP

  == domain 4  score: 3.1 bits;  conditional E-value: 0.27
                     E-SSS-- CS
  zf-C4_Topoisom   3 kCPkCgg 9  
                     +CP Cg 
      EPX70913.1 107 ECPRCGY 113
                     7****94 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   1.6     0.036        11      23      43 ..       8      31 ..       8      32 .. 0.87
   2 ?    3.9   0.1      0.18        54      33      43 ..      72      84 ..      60      85 .. 0.71
   3 ?    0.9   0.0       1.6   4.7e+02      38      43 ..     107     112 ..      91     118 .. 0.78

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.036
   zf-RING_5 23 ifCekClkkll...ekeavCpiCr 43
                +fC++C + l    ++  +C +C+
  EPX70913.1  8 VFCSECGNLLEsttAQWTTCDQCQ 31
                69****999999998889999997 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.18
   zf-RING_5 33 l..ekeavCpiCr 43
                   + + +Cp C+
  EPX70913.1 72 EaaTIDEKCPKCG 84
                25567899****7 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 1.6
   zf-RING_5  38 vCpiCr 43 
                 +Cp C+
  EPX70913.1 107 ECPRCG 112
                 566664 PP

>> HalOD2  Halobacterial output domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.2     0.079        23      28      46 ..       5      22 ..       1      26 [. 0.80
   2 ?   -1.0   0.5       5.5   1.7e+03      34      37 ..      27      30 ..      19      41 .. 0.53
   3 ?    6.9   1.3      0.02       5.9       3      38 ..      78     112 ..      76     118 .. 0.71

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.079
      HalOD2 28 GayvWkCtrCGevqaaAdp 46
                G+ v+ C++CG+ + + ++
  EPX70913.1  5 GSLVF-CSECGNLLESTTA 22
                66665.*******999886 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 5.5
      HalOD2 34 CtrC 37
                C +C
  EPX70913.1 27 CDQC 30
                3333 PP

  == domain 3  score: 6.9 bits;  conditional E-value: 0.02
      HalOD2   3 ekCseCsldWttrhGdglGeGyrqLGayv.WkCtrCG 38 
                 ekC++C+ d  t h   l       G+ v + C rCG
  EPX70913.1  78 EKCPKCGNDQMTFHTLQLRS--ADEGSTVfYECPRCG 112
                 79999999999999766643..233554425788887 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.1       5.1   1.5e+03       3       8 ..      10      15 ..       8      22 .. 0.75
   2 ?    4.4   0.4      0.29        88       2      13 ..      26      37 ..      25      40 .. 0.86
   3 ?    2.6   0.1       1.1   3.1e+02       2       7 ..      79      84 ..      79      95 .. 0.73
   4 ?    8.2   0.8     0.017       4.9       1      13 [.     106     118 ..     106     119 .] 0.89

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 5.1
   zf-C2H2_4  3 CpiCgk 8 
                C+ Cg 
  EPX70913.1 10 CSECGN 15
                999975 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.29
   zf-C2H2_4  2 kCpiCgksFssk 13
                +C++C+ +++s+
  EPX70913.1 26 TCDQCQSVYPSS 37
                6*****999986 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 1.1
   zf-C2H2_4  2 kCpiCg 7 
                kCp Cg
  EPX70913.1 79 KCPKCG 84
                7****5 PP

  == domain 4  score: 8.2 bits;  conditional E-value: 0.017
   zf-C2H2_4   1 fkCpiCgksFssk 13 
                 ++Cp Cg  Fs++
  EPX70913.1 106 YECPRCGYKFSTN 118
                 89********986 PP

>> zf-ACC  Acetyl-coA carboxylase zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.1      0.72   2.1e+02       4      11 ..      10      17 ..       8      18 .. 0.88
   2 ?    7.7   0.5     0.012       3.7       1       9 [.      24      32 ..      24      34 .. 0.90
   3 ?    4.1   2.9      0.17        51       3       9 ..      79      85 ..      79      85 .. 0.89
   4 ?    3.1   0.1      0.35     1e+02       3       8 ..     107     112 ..     105     113 .. 0.82

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.72
      zf-ACC  4 CpsCgeml 11
                C +Cg++l
  EPX70913.1 10 CSECGNLL 17
                99***976 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.012
      zf-ACC  1 WtKCpsCge 9 
                Wt C++C +
  EPX70913.1 24 WTTCDQCQS 32
                *******87 PP

  == domain 3  score: 4.1 bits;  conditional E-value: 0.17
      zf-ACC  3 KCpsCge 9 
                KCp+Cg+
  EPX70913.1 79 KCPKCGN 85
                9****96 PP

  == domain 4  score: 3.1 bits;  conditional E-value: 0.35
      zf-ACC   3 KCpsCg 8  
                  Cp+Cg
  EPX70913.1 107 ECPRCG 112
                 599998 PP

>> UPF0547  Uncharacterised protein family UPF0547
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.2      0.07        21      15      21 ..       8      14 ..       6      14 .. 0.88
   2 ?    3.5   0.9      0.26        79      16      21 ..      79      84 ..      78      85 .. 0.68
   3 ?   10.9   0.7    0.0013      0.38      16      25 ..     107     116 ..     106     117 .. 0.91

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.07
     UPF0547 15 qfCphCG 21
                +fC++CG
  EPX70913.1  8 VFCSECG 14
                69****9 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.26
     UPF0547 16 fCphCG 21
                +Cp CG
  EPX70913.1 79 KCPKCG 84
                577776 PP

  == domain 3  score: 10.9 bits;  conditional E-value: 0.0013
     UPF0547  16 fCphCGyvFq 25 
                 +Cp CGy F+
  EPX70913.1 107 ECPRCGYKFS 116
                 7********7 PP

>> NOB1_Zn_bind  Nin one binding (NOB1) Zn-ribbon like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.4     0.038        11      23      31 ..       7      15 ..       2      22 .. 0.86
   2 ?   -0.3   0.1       4.2   1.3e+03       9      19 ..      25      35 ..      18      41 .. 0.74
   3 ?    7.3   0.2     0.017       5.1      26      36 ..      80      90 ..      68     106 .. 0.77
   4 ?    1.2   0.3       1.4   4.2e+02      26      32 ..     108     114 ..      99     116 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.038
  NOB1_Zn_bind 23 kkFCpkCGn 31
                   +FC++CGn
    EPX70913.1  7 LVFCSECGN 15
                  68******9 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 4.2
  NOB1_Zn_bind  9 lrChaCfkvtk 19
                  + C  C +v++
    EPX70913.1 25 TTCDQCQSVYP 35
                  56888888875 PP

  == domain 3  score: 7.3 bits;  conditional E-value: 0.017
  NOB1_Zn_bind 26 CpkCGnktLkr 36
                  CpkCGn++++ 
    EPX70913.1 80 CPKCGNDQMTF 90
                  ******98764 PP

  == domain 4  score: 1.2 bits;  conditional E-value: 1.4
  NOB1_Zn_bind  26 CpkCGnk 32 
                   Cp+CG k
    EPX70913.1 108 CPRCGYK 114
                   *****75 PP

>> zf-tcix  Putative treble-clef, zinc-finger, Zn-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.1       1.4   4.1e+02      13      17 ..      10      14 ..       8      16 .. 0.90
   2 ?    6.1   1.0     0.028       8.5      12      17 ..      79      84 ..      78      86 .. 0.90
   3 ?    3.7   0.2      0.16        49      12      17 ..     107     112 ..     106     117 .. 0.87

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 1.4
     zf-tcix 13 CpkCG 17
                C++CG
  EPX70913.1 10 CSECG 14
                ****9 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.028
     zf-tcix 12 kCpkCG 17
                kCpkCG
  EPX70913.1 79 KCPKCG 84
                9***** PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.16
     zf-tcix  12 kCpkCG 17 
                  Cp+CG
  EPX70913.1 107 ECPRCG 112
                 5***** PP

>> Mu-like_Com  Mu-like prophage protein Com
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.2       1.2   3.4e+02       7      16 ..      10      19 ..       7      32 .. 0.72
   2 ?    7.8   0.5    0.0071       2.1      17      31 ..      71      84 ..      68     100 .. 0.82
   3 ?    4.3   1.1      0.09        27      26      31 ..     107     112 ..      96     114 .. 0.88

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 1.2
  Mu-like_Com  7 CGeCaRLLaK 16
                 C eC  LL  
   EPX70913.1 10 CSECGNLLES 19
                 7888877755 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0071
  Mu-like_Com 17 aeAlDeltiKCPRCG 31
                  eA   +  KCP+CG
   EPX70913.1 71 EEAAT-IDEKCPKCG 84
                 56666.788****** PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.09
  Mu-like_Com  26 KCPRCG 31 
                   CPRCG
   EPX70913.1 107 ECPRCG 112
                  6****9 PP

>> CpXC  CpXC protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   2.6       2.1   6.2e+02      33      45 ..      20      32 ..      10      79 .. 0.75
   2 ?    5.8   0.2     0.046        14      39      55 ..      79      95 ..      61     106 .. 0.74
   3 ?    6.3   2.5     0.031       9.4      32      49 ..     100     117 ..      79     119 .] 0.64

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 2.1
        CpXC 33 gslfeatCpkCga 45
                 + + +tC++C+ 
  EPX70913.1 20 TTAQWTTCDQCQS 32
                4555678888865 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.046
        CpXC 39 tCpkCgatakleaplly 55
                +CpkCg++ +  + l  
  EPX70913.1 79 KCPKCGNDQMTFHTLQL 95
                68888888776665554 PP

  == domain 3  score: 6.3 bits;  conditional E-value: 0.031
        CpXC  32 dgslfeatCpkCgatakl 49 
                 +gs   ++Cp+Cg++++ 
  EPX70913.1 100 EGSTVFYECPRCGYKFST 117
                 577778899999998875 PP

>> PhnA_Zn_Ribbon  PhnA Zinc-Ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.1      0.44   1.3e+02      19      27 ..       7      15 ..       5      15 .. 0.75
   2 ?    2.6   0.1      0.44   1.3e+02       5      10 ..      27      32 ..      23      35 .. 0.79
   3 ?    3.2   3.4      0.29        88       4      27 ..      79     113 ..      79     116 .. 0.52

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.44
  PhnA_Zn_Ribbon 19 llvCpeCah 27
                    l  C+eC++
      EPX70913.1  7 LVFCSECGN 15
                    556****85 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.44
  PhnA_Zn_Ribbon  5 CplCaS 10
                    C +C+S
      EPX70913.1 27 CDQCQS 32
                    899998 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.29
  PhnA_Zn_Ribbon   4 kCplCaSeytY..........edgallv.CpeCah 27 
                     kCp+C+ +             e+ +++  Cp C++
      EPX70913.1  79 KCPKCGNDQMTfhtlqlrsadEGSTVFYeCPRCGY 113
                     78888766322233366665544444323666665 PP

>> Opy2  Opy2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   5.8      0.33        99      21      34 ..      21      34 ..       7      34 .. 0.63
   2 ?    6.1   0.1     0.047        14      10      19 ..      79      88 ..      75      95 .. 0.83
   3 ?    0.7   0.1       2.2   6.6e+02      10      15 ..     107     112 ..     103     114 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.33
        Opy2 21 vltaqtCtsCakty 34
                + +  tC++C+++y
  EPX70913.1 21 TAQWTTCDQCQSVY 34
                33445******986 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.047
        Opy2 10 sCPsCpsgee 19
                +CP+C +++ 
  EPX70913.1 79 KCPKCGNDQM 88
                8*****9985 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 2.2
        Opy2  10 sCPsCp 15 
                 +CP C 
  EPX70913.1 107 ECPRCG 112
                 699995 PP

>> DUF35_N  Rubredoxin-like zinc ribbon domain (DUF35_N)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.1       1.7     5e+02      27      32 ..       9      14 ..       7      16 .. 0.65
   2 ?    0.2   0.6       2.4   7.1e+02      13      21 ..      26      34 ..      25      36 .. 0.80
   3 ?    5.6   0.1     0.048        14      27      36 ..      79      88 ..      77      89 .. 0.76
   4 ?    3.4   0.1      0.23        70       5      18 ..      99     112 ..      97     113 .. 0.69

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 1.7
     DUF35_N 27 vCphCg 32
                +C+ Cg
  EPX70913.1  9 FCSECG 14
                566666 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 2.4
     DUF35_N 13 rCpdCGtvq 21
                 C+ C++v+
  EPX70913.1 26 TCDQCQSVY 34
                6999*9994 PP

  == domain 3  score: 5.6 bits;  conditional E-value: 0.048
     DUF35_N 27 vCphCgsddl 36
                 Cp+Cg d++
  EPX70913.1 79 KCPKCGNDQM 88
                5999998876 PP

  == domain 4  score: 3.4 bits;  conditional E-value: 0.23
     DUF35_N   5 aegrLvgqrCpdCG 18 
                 +eg  v+  Cp CG
  EPX70913.1  99 DEGSTVFYECPRCG 112
                 56666777788887 PP

>> Nop10p  Nucleolar RNA-binding protein, Nop10p family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.8       5.2   1.5e+03      31      31 ..      21      21 ..       9      40 .. 0.57
   2 ?    8.8   0.2    0.0055       1.6      15      28 ..      75      88 ..      65      99 .. 0.80
   3 ?    1.8   0.1      0.86   2.6e+02      15      25 ..     103     113 ..      92     118 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 5.2
                S CS
      Nop10p 31 h 31
                 
  EPX70913.1 21 T 21
                1 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.0055
                ESSSB-TTT-SB-B CS
      Nop10p 15 TLkkvcpecggptk 28
                T+ ++cp+cg++  
  EPX70913.1 75 TIDEKCPKCGNDQM 88
                999*******9654 PP

  == domain 3  score: 1.8 bits;  conditional E-value: 0.86
                 ESSSB-TTT-S CS
      Nop10p  15 TLkkvcpecgg 25 
                 T  ++cp+cg 
  EPX70913.1 103 TVFYECPRCGY 113
                 55679****96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       823  (0.0459033); expected 358.6 (0.02)
Passed bias filter:                      492  (0.0274416); expected 358.6 (0.02)
Passed Vit filter:                       107  (0.00596798); expected 17.9 (0.001)
Passed Fwd filter:                        76  (0.00423894); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              60  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.49
# Mc/sec: 733.26
//
Query:       EPX70914.1  [L=174]
Description: Ino80 complex subunit Iec3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.7e-11   43.3   0.2    1.2e-10   42.5   0.2    1.4  1  Ino80_Iec3  IEC3 subunit of the Ino80 complex, chromatin re-m
  ------ inclusion threshold ------
      0.083   12.6   0.0        0.1   12.3   0.0    1.2  1  CCDC85      CCDC85 family
       0.11   12.7   0.3       0.24   11.7   0.3    1.5  1  Osmo_CC     Osmosensory transporter coiled coil


Domain annotation for each model (and alignments):
>> Ino80_Iec3  IEC3 subunit of the Ino80 complex, chromatin re-modelling
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.5   0.2     2e-14   1.2e-10       1      55 [.       5      59 ..       5      65 .. 0.95

  Alignments for each domain:
  == domain 1  score: 42.5 bits;  conditional E-value: 2e-14
  Ino80_Iec3  1 kSfkkKYrKlrvkFeekmkesesLikeeqkiedlskRLaeenDqLLdlLldlNns 55
                kSfk+KY Klr +F+  ++e +++ ++   i ++ +R+  en +L dlLld+N++
  EPX70914.1  5 KSFKRKYLKLRKSFDVVLQETDNIEQKIADISQVYRRILMENTHLTDLLLDMNKT 59
                8***********************99999999999******************87 PP

>> CCDC85  CCDC85 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   1.7e-05       0.1      99     146 ..      15      62 ..       4     103 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.7e-05
      CCDC85  99 ryaakvlrkevalylqklkeLearqeellrenleLkelvllLdeekaa 146
                 r + +v+ +e   + qk++++ +  + +l en++L +l+l +++ +  
  EPX70914.1  15 RKSFDVVLQETDNIEQKIADISQVYRRILMENTHLTDLLLDMNKTTLP 62 
                 567789999****************************99988876655 PP

>> Osmo_CC  Osmosensory transporter coiled coil
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.3     4e-05      0.24      10      26 ..      22      37 ..      19      48 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 4e-05
                XXXXXTHHHHHHHHHHH CS
     Osmo_CC 10 LqehYdnIEqkvedide 26
                Lqe  dnIEqk+ di +
  EPX70914.1 22 LQE-TDNIEQKIADISQ 37
                444.4**********75 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       621  (0.0346366); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.28s 00:00:00.72 Elapsed: 00:00:00.46
# Mc/sec: 1148.73
//
Query:       EPX70915.1  [L=58]
Description: cytochrome c oxidase subunit VIIa [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (58 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       331  (0.0184617); expected 358.6 (0.02)
Passed bias filter:                      256  (0.0142785); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.24s 00:00:00.60 Elapsed: 00:00:00.40
# Mc/sec: 433.61
//
Query:       EPX70916.1  [L=222]
Description: transcription factor TFIID complex subunit 8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.5e-18   64.8   1.4    1.3e-17   64.1   1.4    1.4  1  TAF8_C     Transcription factor TFIID complex subunit 8 C-ter
  ------ inclusion threshold ------
      0.066   12.3   0.0       0.11   11.6   0.0    1.3  1  RE_HaeIII  HaeIII restriction endonuclease


Domain annotation for each model (and alignments):
>> TAF8_C  Transcription factor TFIID complex subunit 8 C-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.1   1.4   1.4e-21   1.3e-17       1      48 [.     129     176 ..     129     177 .. 0.98

  Alignments for each domain:
  == domain 1  score: 64.1 bits;  conditional E-value: 1.4e-21
      TAF8_C   1 yiPshlPpfPppHTYkrTpvyneretdpkkirekaaeqsrlaekaLrk 48 
                 y+  hlPpfP  HTY+ +pvy+ r t+p++ire a+++srlae+aLrk
  EPX70916.1 129 YVANHLPPFPASHTYLASPVYPVRPTSPRRIRELATKESRLAENALRK 176
                 8999*******************************************9 PP

>> RE_HaeIII  HaeIII restriction endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   1.2e-05      0.11     160     195 ..      69     104 ..      51     119 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 1.2e-05
   RE_HaeIII 160 seledkeedvyvPllkafidelerayekdkdipekl 195
                 s l++  ++vy Pl k fi++le + +k++dip+++
  EPX70916.1  69 SSLHKELHKVYKPLSKEFIENLEETIHKSADIPDRF 104
                 667777899************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       564  (0.0314574); expected 358.6 (0.02)
Passed bias filter:                      407  (0.0227007); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.27s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1623.52
//
Query:       EPX70917.1  [L=72]
Description: hypothetical protein SOCG_05956 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.1e-05   23.9   0.1    3.3e-05   23.8   0.1    1.1  1  Mitochondr_Som1  Mitochondrial export protein Som1


Domain annotation for each model (and alignments):
>> Mitochondr_Som1  Mitochondrial export protein Som1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.1   1.8e-09   3.3e-05      32      77 ..      19      64 ..       2      72 .] 0.64

  Alignments for each domain:
  == domain 1  score: 23.8 bits;  conditional E-value: 1.8e-09
  Mitochondr_Som1 32 veLkkCeLkelvQyeCtfkeskkeekekkiiClpvkRlfrrC.......keke 77
                     +   + + k + Qy C+      e++++k++Cl+v+R+fr+        + ++
       EPX70917.1 19 T---NLQYKCMKQYMCEKA----EDDSNKVVCLTVHRFFRKMqggleevQPTN 64
                     3...345566899999932....345667***********9866655554445 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       585  (0.0326287); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.41
# Mc/sec: 522.77
//
Query:       EPX70918.1  [L=359]
Description: transcriptional regulatory protein Rxt3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-16   61.7  10.5    4.1e-12   47.0   0.1    3.8  4  Rxt3        Histone deacetylation protein Rxt3
     0.0007   19.7   0.0      0.002   18.2   0.0    1.7  2  LCCL        LCCL domain
  ------ inclusion threshold ------
       0.15   12.1   0.0       0.27   11.3   0.0    1.3  1  PgaD        PgaD-like protein


Domain annotation for each model (and alignments):
>> Rxt3  Histone deacetylation protein Rxt3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       1.4   8.4e+03      86      90 ..      17      21 ..       2      59 .. 0.56
   2 ?   -1.7   3.9       0.8   4.8e+03      61      80 ..      95     114 ..      47     141 .. 0.51
   3 !   47.0   0.1   6.9e-16   4.1e-12       3      45 ..     231     272 ..     229     281 .. 0.83
   4 !   18.2   0.0   5.3e-07    0.0032     102     127 .]     283     308 ..     275     308 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1.4
        Rxt3 86 kkkkr 90
                +++++
  EPX70918.1 17 EPSHE 21
                11111 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.8
        Rxt3  61 akkkakkkskeekskdesea 80 
                 +++k+ k +kee++++e+++
  EPX70918.1  95 HSEKKPKVEKEEENQRENQQ 114
                 22222222222222333333 PP

  == domain 3  score: 47.0 bits;  conditional E-value: 6.9e-16
        Rxt3   3 kvprerlkeskreeivarrelWGtdvYtdDSDvvaaliHsGfi 45 
                 ++  + l+++  + ++ +relWGtdvYtdDSD+v++l+H+G++
  EPX70918.1 231 EIDAKWLNAAI-NPRLGKRELWGTDVYTDDSDIVTMLAHCGYF 272
                 55666666554.68899************************99 PP

  == domain 4  score: 18.2 bits;  conditional E-value: 5.3e-07
        Rxt3 102 hvtlliLpkLekYastvrygikSRew 127
                  v+l iLp+L  Y++t +++i+SR+w
  EPX70918.1 283 VVDLFILPPLLGYKGTRKNQIESRSW 308
                 699*********************** PP

>> LCCL  LCCL domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       1.8   1.1e+04      63      91 ..      34      63 ..      23      68 .. 0.52
   2 !   18.2   0.0   3.3e-07     0.002      33      92 ..     247     311 ..     238     315 .. 0.91

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 1.8
                EEEEEEEE--B-S---EE.-SS-EEE--S- CS
        LCCL 63 glvvvtiveelkeykgsk.qngieSeslsk 91
                g+ v++i + l++ ++ k   gieS + ++
  EPX70918.1 34 GFSVLSIGSILENPQSPKsPEGIESRQNDT 63
                555555555555444444356777755443 PP

  == domain 2  score: 18.2 bits;  conditional E-value: 3.3e-07
                 S--EESSSSEETTSBHHHHHHHHTSS.....-TT-EEEEEEEE--B-S---EE-SS-EEE--S-B CS
        LCCL  33 kasvvGskvYssdSsICkAAihaGvi.....dnkgglvvvtiveelkeykgskqngieSeslskk 92 
                 k +++G++vY++dS I +   h G        +k  +v++ i   l  ykg+++n ieS s+++ 
  EPX70918.1 247 KRELWGTDVYTDDSDIVTMLAHCGYFslfkpITKIAVVDLFILPPLLGYKGTRKNQIESRSWTSR 311
                 5689**********************999888899999999******************999876 PP

>> PgaD  PgaD-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   4.4e-05      0.27      17      37 ..     260     280 ..     253     306 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 4.4e-05
        PgaD  17 dsilTllaWagwiyLfvpllv 37 
                 ++i+T+la++g++ Lf+p+  
  EPX70918.1 260 SDIVTMLAHCGYFSLFKPITK 280
                 789***************533 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (359 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1104  (0.0615762); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 2500.14
//
Query:       EPX70919.1  [L=393]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      9e-18   64.7   6.6      9e-18   64.7   6.6    3.7  4  DUF2457   Protein of unknown function (DUF2457)
  ------ inclusion threshold ------
        2.4    7.4  10.6        4.8    6.4  10.6    1.4  1  NOA36     NOA36 protein


Domain annotation for each model (and alignments):
>> DUF2457  Protein of unknown function (DUF2457)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.9   5.8       1.2   1.1e+04     297     336 ..      71     110 ..      34     154 .. 0.54
   2 ?    0.3   2.7     0.033     3e+02      98     125 ..     157     182 ..     134     218 .. 0.75
   3 ?  -15.3  26.8         2   1.8e+04      58      86 ..     220     249 ..     159     255 .. 0.51
   4 !   64.7   6.6     1e-21     9e-18     161     299 ..     256     380 ..     249     392 .. 0.62

  Alignments for each domain:
  == domain 1  score: -4.9 bits;  conditional E-value: 1.2
     DUF2457 297 lrSppPrrrgksPpkkrlrsPpprklfdrksprrlrspap 336
                  +SppP   ++ P+ + ++s      ++ + p+ lr p  
  EPX70919.1  71 GKSPPPISSKNQPSSRPQKSHVGDAKIKGENPNLLRKPLG 110
                 2455554444444333333333333333333444444443 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.033
     DUF2457  98 eeasdGyetDnEaGFAdSdeeddedddl 125
                 +  +d  + DnE    +Sdeedd+d  +
  EPX70919.1 157 DVLEDVLKKDNELKVESSDEEDDDD--F 182
                 5556777889999999999766644..3 PP

  == domain 3  score: -15.3 bits;  conditional E-value: 2
     DUF2457  58 eddeedeedddddd.ddedddedddeeded 86 
                 edd e+e+d++++d d +d+d d d +de 
  EPX70919.1 220 EDDTEEEDDEEENDsDFSDEDIDSDINDES 249
                 333333333222221333333333333333 PP

  == domain 4  score: 64.7 bits;  conditional E-value: 1e-21
     DUF2457 161 sslesakkseksrkkkarelkskkskirpetpeL.PDSTDFVCGTlDEDrplEeaYlsclearrrekhkviPQDiDPsFPtsdpededdddevakkkae 258
                 ssl+++     +r+++++  +s  ++  p + +L PD TDFV GT+DED+p   a+ s l++   +   ++PQDiDP+FP s+ +de  + e  +++++
  EPX70919.1 256 SSLSNN---VGERRSPSKFPSSPIQTAAPPSENLiPDDTDFVPGTFDEDQPACLAFASSLANHSPRYFLMVPQDIDPTFPDSESDDEFTE-EKSSRAQR 350
                 444432...22222222222222223444555544****************************************************966.55555566 PP

     DUF2457 259 esddevwlhgeledldeelrdrrkersrkksekaspkrlrS 299
                 +s +++w  ++ ++  e+++            +  +k  rS
  EPX70919.1 351 SSAKAKWNPKHSSNNVEKKSS-----------SGMSKNSRS 380
                 666666755544444333222...........222222222 PP

>> NOA36  NOA36 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4  10.6   0.00053       4.8     239     302 ..     171     248 ..     131     253 .. 0.64

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.00053
       NOA36 239 kqadgsddddddeedsdydaylkalasg............ddeddegd..edddddddeedddeeeddedeeeeeeee 302
                  ++++++dddd ++  ++++  ++++ g            +++ + ++  +d +++ddee++d++  ded +++ ++e
  EPX70919.1 171 VESSDEEDDDDFAYPVKFQKDSSNIGKGktyrpirspkppAKKLNVSSfeDDTEEEDDEEENDSDFSDEDIDSDINDE 248
                 4455667777788888888888888877999****9998844444333002223333333333333344444443333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (393 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1010  (0.0563333); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.30s 00:00:00.94 Elapsed: 00:00:00.48
# Mc/sec: 2456.65
//
Query:       EPX70920.1  [L=426]
Description: pyruvate dehydrogenase X component [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-21   75.9   0.7    3.2e-21   74.9   0.7    1.5  1  Biotin_lipoyl    Biotin-requiring enzyme
    1.4e-06   28.6   0.0    4.3e-06   27.0   0.0    1.8  1  E3_binding       e3 binding domain
     0.0023   17.7   0.5      0.037   13.8   0.0    2.8  3  Biotin_lipoyl_2  Biotin-lipoyl like
  ------ inclusion threshold ------
       0.18   11.9   0.1       0.91    9.6   0.0    2.1  2  QRPTase_N        Quinolinate phosphoribosyl transferase, N-te


Domain annotation for each model (and alignments):
>> Biotin_lipoyl  Biotin-requiring enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.9   0.7   7.2e-25   3.2e-21       3      71 ..      36     105 ..      34     107 .. 0.96

  Alignments for each domain:
  == domain 1  score: 74.9 bits;  conditional E-value: 7.2e-25
                    EEESSSEEEEEE..ECSESSSTTCEE-TTSEEEEEECTTEEEEEEBSSSEEEEEESSTTTEEE-TTCEEE CS
  Biotin_lipoyl   3 iksPmiGesveeg.vvevlvkvGdkVkagqvlaeveamKmemeieapkaGvvkeilvkeGdtvevgdlla 71 
                    + +P++++++eeg ++++  k+Gd+ kag+v++eve++K++m++ea+++G++++ilv++G+++ vg+ + 
     EPX70920.1  36 FCMPALSPTMEEGnIAKWVLKEGDSFKAGDVILEVETDKATMDVEAQDDGILAKILVNSGTKIAVGKEIG 105
                    779***************************************************************9986 PP

>> E3_binding  e3 binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.0   0.0   9.5e-10   4.3e-06       5      36 .]     160     192 ..     158     192 .. 0.97

  Alignments for each domain:
  == domain 1  score: 27.0 bits;  conditional E-value: 9.5e-10
                 HHHHHHHHHCT-.-TTTS---CTTTBE-HHHHC CS
  E3_binding   5 PaaRklAkelGi.dLsdvkGtGpgGRItkeDVl 36 
                 P++ +l + + i d+s +++tGp+GR++k+DVl
  EPX70920.1 160 PSVAHLLHLHKIqDPSVITATGPRGRLLKGDVL 192
                 9*******************************7 PP

>> Biotin_lipoyl_2  Biotin-lipoyl like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.0   8.4e-06     0.037      10      36 ..      47      73 ..      41      82 .. 0.88
   2 ?    0.2   0.0      0.15   6.8e+02       5      24 ..      79      98 ..      75     102 .. 0.79
   3 ?   -1.2   0.0      0.41   1.8e+03      26      33 ..     188     195 ..     188     202 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 8.4e-06
  Biotin_lipoyl_2 10 sGrVaqlnVkdGqrVkaGdvLaelDsr 36
                      G +a++  k+G+  kaGdv++e +++
       EPX70920.1 47 EGNIAKWVLKEGDSFKAGDVILEVETD 73
                     699*******************99876 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.15
  Biotin_lipoyl_2  5 IaapvsGrVaqlnVkdGqrV 24
                     + a+ +G +a+++V  G  +
       EPX70920.1 79 VEAQDDGILAKILVNSGTKI 98
                     566669********999766 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 0.41
  Biotin_lipoyl_2  26 aGdvLael 33 
                      +GdvLa +
       EPX70920.1 188 KGDVLAFI 195
                      8****987 PP

>> QRPTase_N  Quinolinate phosphoribosyl transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.0    0.0002      0.91      48      69 ..      51      72 ..      37      77 .. 0.86
   2 ?   -1.2   0.0      0.48   2.2e+03      44      65 ..      84     105 ..      74     116 .. 0.67

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.0002
                EEESS-TT-EEETTEEEEEEEE CS
   QRPTase_N 48 vellvkDGervekgdvlleieG 69
                +++  k+G+++++gdv+le+e 
  EPX70920.1 51 AKWVLKEGDSFKAGDVILEVET 72
                5799***************986 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.48
                 TTTEEEESS-TT-EEETTEEEE CS
   QRPTase_N  44 pglevellvkDGervekgdvll 65 
                 +g+ +++lv++G++++ g+ + 
  EPX70920.1  84 DGILAKILVNSGTKIAVGKEIG 105
                 5666777777777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (426 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       838  (0.0467399); expected 358.6 (0.02)
Passed bias filter:                      570  (0.0317921); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 2955.31
//
Query:       EPX70921.1  [L=393]
Description: hypothetical protein SOCG_04038 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-69  235.1   0.0    1.3e-69  234.9   0.0    1.1  1  Peptidase_M22  Glycoprotease family
  ------ inclusion threshold ------
      0.043   12.9   0.0      0.074   12.1   0.0    1.4  1  AnmK           Anhydro-N-acetylmuramic acid kinase


Domain annotation for each model (and alignments):
>> Peptidase_M22  Glycoprotease family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  234.9   0.0   1.5e-73   1.3e-69       6     271 .]      59     357 ..      54     357 .. 0.88

  Alignments for each domain:
  == domain 1  score: 234.9 bits;  conditional E-value: 1.5e-73
                    EEEEEEEE....SSSSHHHHHHHHHHHHHHHHHHHHHHH.TSTGGGEEEEEEEEESS-HHHHHHHHHHHHHHHHHCT--EEEEEHHHHHHHCCHCT CS
  Peptidase_M22   6 vvasqkelhakyGGvvPelasraHserllplieealaea.glsledldaIavtkgPGlftgLrvGvsfAkglalalnkPlvgVnhleahalaarle 100
                    +++   + ++kyGG++P+++ ++H+++l  ++ e+++++  l +++ d Iavt+gPG++++L +G++fAkgla++++kPl++V+h++ahal+a+le
     EPX70921.1  59 NTHRTLSKYEKYGGIHPSVVIQEHQKNLANVVYETINQSrSLGVSKYDLIAVTRGPGMIGPLAIGLNFAKGLAVGIDKPLLAVHHMQAHALTAQLE 154
                    5555666789***************************99789999*************************************************** PP

                    SECSSC.EEEEESSSTEEEEEECT.TEEEEEEEESSSEHHHHHHHHHHHHT..SSCCH...HHHHHHCTC...S...........EET......TE CS
  Peptidase_M22 101 ekeefP.vvllvsGghtqvylvke.gryeilgetlddaagealdkvarllglpypggp...kieklakeg...kk....iefprplkg......ld 178
                    ++  fP +++lvsGght ++l+++   +eil++t d+a+g+ ldk+a++l++p++++    ++ek+   +   ++     + p p+         +
     EPX70921.1 155 SQVPFPfLSILVSGGHTLLILSNSvISHEILASTTDIAIGDYLDKCAKYLEIPWNNQMpaaALEKFS--IppiNDlnmdCNPPNPMSTgdkahnPN 248
                    7669**************************************************7666244555444..24453334456688888879*****9* PP

                    EE.CHHHHHHHHHHST.T.....HHHHHHHHHHHHHHHHHHHHHHHHHH...CTBSEEEEESGGGGXHHHHH.......CHCCHHHHTTSEEEXXX CS
  Peptidase_M22 179 fsfsGlktavlkelek.e.....vedlaasfqeavvdhlvekteralkl...pkakelvilGGvaankrLre.......aleeeaeelglkliiPp 258
                    fsfsGl++++++ +++       ++ la+++qea+++h+++k+++a++     +++ lv++GGva n++L++        l +  +++++kl++P+
     EPX70921.1 249 FSFSGLESYARRIITSrTwtnseKKILAYKLQEAAFKHICQKLAKAIEPidlSRVRFLVCSGGVARNSLLKKmleeqliSLYNKGSAPKMKLVYPS 344
                    **************443245689999********************999888999999**************77776666666677789******* PP

                    HHHHSSXCHHHHH CS
  Peptidase_M22 259 lkyctdnaamiaw 271
                    l++c+dnaamia+
     EPX70921.1 345 LELCSDNAAMIAY 357
                    ***********97 PP

>> AnmK  Anhydro-N-acetylmuramic acid kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   8.2e-06     0.074     260     312 ..     274     328 ..     233     362 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 8.2e-06
                 ...HHHHHHHHHHHHHHHHHHHHHH-TT--EEEEESGG.GG-HHHHHHHHHHSTT CS
        AnmK 260 l.peDvqatLveltavtiadallkaqadaerllvcGGG.aknpvlmarlaallpe 312
                 + ++ +q    +   + +a a++ ++ +  r+lvc GG a+n++l ++l+++l +
  EPX70921.1 274 IlAYKLQEAAFKHICQKLAKAIEPIDLSRVRFLVCSGGvARNSLLKKMLEEQLIS 328
                 23666666667777778888888888888999999777479*********99976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (393 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       492  (0.0274416); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 2642.81
//
Query:       EPX70922.1  [L=725]
Description: GTPase activating protein Gyp2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-43  148.4   2.7    2.3e-43  148.4   2.7    2.2  2  RabGAP-TBC  Rab-GTPase-TBC domain
    5.3e-12   45.6   1.2    1.4e-11   44.2   1.2    1.7  1  GRAM        GRAM domain


Domain annotation for each model (and alignments):
>> RabGAP-TBC  Rab-GTPase-TBC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.4   2.7   2.6e-47   2.3e-43       1     215 []     224     429 ..     224     429 .. 0.90
   2 ?   -1.5   0.1      0.18   1.6e+03      47      80 ..     558     591 ..     540     608 .. 0.52

  Alignments for each domain:
  == domain 1  score: 148.4 bits;  conditional E-value: 2.6e-47
  RabGAP-TBC   1 delRgevWklllgyepevkrlkksekkqeksekeksklekseeskelsqIkkDvprtfpesesfknkqgqnqLeriLkaysiynpevgYcqGmndivap 99 
                 d+lR++vW++++g++  ++ +    +k++++++ ++ l+++   ++ + I++D++r++p+    ++k+g ++L+r+L+ ys  n ++gYcq +n +va 
  EPX70922.1 224 DNLRADVWETCSGSLY-WRWK----SKDYYNNNVHKVLTEAC--EYGEEIERDLSRSLPSYPAYQSKIGIDALRRVLRFYSGENADMGYCQAINIVVAA 315
                 589***********63.3222....24444444444444444..5689***********88999*********************************** PP

  RabGAP-TBC 100 lllvsldeeeaFwcfvsLlekyklrdlytsslpglkrklkvleellkkkdpklykhlkeegldlelfaikwfltlflrefpletvlrlwD.lllegekf 197
                 ll +++ ee+a+++f+++  + +++ +y +  +gl  +l v+e +l++++p ly++l e ++dl l++i+wf  lf+++f l++++ ++D ++++g+++
  EPX70922.1 316 LL-IYCTEEQAYFLFSQIS-QLYVPGYYGKLIHGLLLDLTVFEYVLQQTLPHLYQKLSEMKMDLRLITINWFFSLFIKDFRLDYAMQIFDwFIVNGPNV 412
                 **.9999999*********.9*********************************************************************9999**966 PP

  RabGAP-TBC 198 vllrvalailklleeell 215
                  l+++ala++k + + +l
  EPX70922.1 413 -LFQIALALFKINAQGIL 429
                 .***********999876 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.18
  RabGAP-TBC  47 lsqIkkDvprtfpesesfknkqgqnqLeriLkay 80 
                 ++ Ikk +pr +  ++   +++ +++L++ L+++
  EPX70922.1 558 EKLIKKSIPRQIFFEKAAHYQKSERKLFKRLYTW 591
                 3444444444444333334444444444444444 PP

>> GRAM  GRAM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.2   1.2   1.6e-15   1.4e-11       7     106 ..      26     121 ..      24     127 .. 0.89

  Alignments for each domain:
  == domain 1  score: 44.2 bits;  conditional E-value: 1.6e-15
                 S----TT--EEEEEEEEEESS.SEEEEEEEEESSEEEEEE-STT---EEEEEGGGEEEEEE....-TT-TT-EEEEESS-...EEEEE--TTHHHHHHH CS
        GRAM   7 fkellpeEkllatykCyllrdggpvqGrlyltnyrlcFrskplgsskkvvlpladikriekstsaanllengiqvetsskdl.elaFagfvtrdeaief 104
                 f+ l+++E+++   +C++  d  +  G++++++++lcF+s+   +++++++pl++i+++e+  s++  +     ++t ++++ +l+ +g+++++e++++
  EPX70922.1  26 FR-LTKQEEIIIGSSCEIKYDDSLIFGSIFISTSFLCFHSLD--YKTRFTFPLSTIRQVERTVSETDVFVF--DLITLQNQIlHLTIKGTRQQSELFCD 119
                 78.99***********************************98..6666*************8888888865..5678888888**************98 PP

                 HH CS
        GRAM 105 ie 106
                 ++
  EPX70922.1 120 RL 121
                 64 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (725 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       609  (0.0339673); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.29s 00:00:00.92 Elapsed: 00:00:00.46
# Mc/sec: 4704.11
//
Query:       EPX70923.1  [L=482]
Description: ran GTPase binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.6e-31  106.9   1.1    1.1e-30  106.2   1.1    1.4  1  SPRY        SPRY domain
    2.8e-16   59.7   2.9    2.8e-16   59.7   2.9    1.7  2  CLTH        CTLH/CRA C-terminal to LisH motif domain
    0.00074   19.4   0.0     0.0019   18.1   0.0    1.7  1  LisH        LisH
  ------ inclusion threshold ------
      0.073   13.0   1.0       0.69    9.9   0.3    2.2  2  Blo-t-5     Mite allergen Blo t 5
       0.14   12.1   0.0       0.26   11.3   0.0    1.4  1  Neuralized  Neuralized


Domain annotation for each model (and alignments):
>> SPRY  SPRY domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.2   1.1     3e-34   1.1e-30       2     119 ..     114     230 ..     113     231 .. 0.96

  Alignments for each domain:
  == domain 1  score: 106.2 bits;  conditional E-value: 3e-34
                 EEEEEEET.CCTSSEEEEEEEETTSSSSSTSSSTSSTTEEEEETETTEEE.EETESCEEEESSSSTTSEEEEEEETTTTEEEEEETTEEEEEEEESTTT CS
        SPRY   2 hyfevkiq.saeggsisvGlateqtdlsdksgegddrgswglcgdngtrt.saeqskaygkqparegdviGvalDleegelsFtkngknlgvaFrnvrg 98 
                 +yfe++++   ++g i+vG+++++t+  + +  g++++swg++g+ng+++  ++++++yg+  +++gdv+G++l+l++++++Ftkng +lgvaF+nv++
  EPX70923.1 114 YYFEIQVLsCGKEGRICVGFCKKNTQ--TGRLPGTTPESWGYHGHNGEIYhGSKTGERYGP-QFQTGDVVGCGLNLINKTIFFTKNGAYLGVAFTNVND 209
                 9*******99999*************..77777*****************89999999999.************************************* PP

                 SSEEEEEEE..STCEEEEESSE CS
        SPRY  99 aelfPvvslg.ngaslkinlgl 119
                   l+P+v l+ +g+ ++ n+g+
  EPX70923.1 210 -SLYPTVGLKsQGEHIRANFGQ 230
                 .*********9*********97 PP

>> CLTH  CTLH/CRA C-terminal to LisH motif domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1      0.99   3.6e+03     104     127 ..     258     281 ..     237     286 .. 0.73
   2 !   59.7   2.9   7.8e-20   2.8e-16       3     143 ..     299     458 ..     297     462 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.99
        CLTH 104 lldpsrrekvakefnsailkllgl 127
                   ++++r+++ k + s +l ++g+
  EPX70923.1 258 ADEQNERKSLLKDLVSSFLINQGY 281
                 445677888888888888887776 PP

  == domain 2  score: 59.7 bits;  conditional E-value: 7.8e-20
        CLTH   3 kerqkIiklilegdlseaiewinenkpellesnsnLeFkLkllqfielirg.........kt..........kdieealeyarenlefend....ehlk 78 
                 + r+kI +l+ +gdl +a+++i   +p+  +  ++L   L+ lqfi+l+r+         ++          k +e +++y+++ ++ + +      ++
  EPX70923.1 299 EIRKKINQLLCNGDLASAVQEITVQYPRAIQDCQDLSLSLRFLQFIQLMRNmqqvrscsaSFsgviseqeemKILEPVMNYSQQFFNDYEKaesqDLKT 397
                 679***********************************************665555555500555554444366999*******9964444477799** PP

        CLTH  79 elekamsLLafsdpeskelssplknlldpsrrekvakefnsailkllglskespLeillsaglsa 143
                 +++  m+LLa+ dp+s    spl+ +l+++  + +a+ +n  +lk  g + es+L+++l++++  
  EPX70923.1 398 MIKLSMGLLAYYDPSS----SPLSFFLENEFQKYIASRINGLLLKFSGSPPESKLQQFLQHTIAF 458
                 *************988....8****************************************9865 PP

>> LisH  LisH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   5.4e-07    0.0019       6      26 ..     271     291 ..     271     291 .. 0.96

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 5.4e-07
                 HHHHHHHHCT-HHHHHHHHHH CS
        LisH   6 LIydYLvkeGyeetAeaFekE 26 
                 L++ +L++ Gy+etA++F+ E
  EPX70923.1 271 LVSSFLINQGYVETAQEFCPE 291
                 89*****************98 PP

>> Blo-t-5  Mite allergen Blo t 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.3   0.00019      0.69      21      91 ..     234     305 ..     216     315 .. 0.77
   2 ?    1.2   0.0     0.095   3.4e+02      25      57 ..     367     399 ..     362     413 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00019
                 X-HHHHHHHHHHHHHHHHHHHHHHH.HHH--SSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS---HHHHHH CS
     Blo-t-5  21 ieeleekleklekallklseqvkel.ektkskelkeqilreltialnfiegakgflerelkRtDLnllekfn 91 
                 + e+++++++  + ll  s ++    e+++ k l + ++    i + ++e+a++f    +kR+D+++  k n
  EPX70923.1 234 LYEIDHAVQEEKELLLSKSLNIASAdEQNERKSLLKDLVSSFLINQGYVETAQEFCPEKVKRSDVEIRKKIN 305
                 455666666655666666666655425677899999999999************************999987 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.095
                 HHHHHHHHHHHHHHHHHHHHHHHH--SSHHHHH CS
     Blo-t-5  25 eekleklekallklseqvkelektkskelkeqi 57 
                 +e+++ le  + + ++ ++++ek++s++lk  i
  EPX70923.1 367 QEEMKILEPVMNYSQQFFNDYEKAESQDLKTMI 399
                 6778888888888888899**********9887 PP

>> Neuralized  Neuralized
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   7.3e-05      0.26      43     147 ..     116     225 ..      94     227 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 7.3e-05
  Neuralized  43 vriekledkwsgsLevGvtsvdPatlepeslPdlatkllreywvvaldeklas...............kegdvlgflvts.egelhfsvNgedqgvals 125
                  +i+ l+   +g + vG+ + + +t     lP ++ +     w   ++ +  +               + gdv+g+ ++  + +++f  Ng   gva++
  EPX70923.1 116 FEIQVLSCGKEGRICVGFCKKNTQTG---RLPGTTPES----WG--YHGHNGEiyhgsktgerygpqfQTGDVVGCGLNLiNKTIFFTKNGAYLGVAFT 205
                 45555666677889999999988888...488877755....44..22222224445677889999999*******999735566779*********** PP

  Neuralized 126 gvpdsqplwavvdlyGqtkqvs 147
                 +v+ds  l+  v l  q ++++
  EPX70923.1 206 NVNDS--LYPTVGLKSQGEHIR 225
                 **889..*****9999888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (482 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       614  (0.0342462); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 2912.58
//
Query:       EPX70924.1  [L=178]
Description: ubiquitin conjugating enzyme E2-C [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-48  163.9   0.0    2.2e-48  163.4   0.0    1.2  1  UQ_con    Ubiquitin-conjugating enzyme
    4.9e-05   23.2   0.1    8.3e-05   22.4   0.1    1.4  1  UEV       UEV domain
     0.0018   18.5   0.0     0.0025   18.1   0.0    1.3  1  RWD       RWD domain
  ------ inclusion threshold ------
       0.12   12.0   0.0       0.23   11.1   0.0    1.6  1  UFC1      Ubiquitin-fold modifier-conjugating enzyme 1


Domain annotation for each model (and alignments):
>> UQ_con  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.4   0.0     5e-52   2.2e-48       1     136 [.      34     168 ..      34     172 .. 0.97

  Alignments for each domain:
  == domain 1  score: 163.4 bits;  conditional E-value: 5e-52
                 HHHHHHHHHHHSTTTTEEEEEEETTEECEEEEEEEB.TTSTTTTEEEEEEEE--TTTTTS--EEEESST-SCTTBETTSBB-CGGGSTTT--TTSHHHH CS
      UQ_con   1 rlqkelkelakkkpsgisaklvddenlfewkvlikgpedtpYeggvFklelefpedYPlkpPkvkfvtkifHPnvdksGevcldiLkeekWspaltles 99 
                 rl++el++l+ ++ +gisa + +d+nl +w ++i+gp dt+Yeg  Fk++++fp +YP+++P++ f+++++HPnvd sG++cldiLk++ Ws+++++++
  EPX70924.1  34 RLRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPVDTYYEGLKFKISMNFPANYPFSAPTIVFTSPMWHPNVDMSGNICLDILKDK-WSAVYNVQT 131
                 7999***********************************************************************************55.********* PP

                 HHHHHHHHHHS--TTS-SSHHHHHHHHHTHHHHHHHH CS
      UQ_con 100 vllsiqsLlaepnpesplnkeaakllkkdreeykkkv 136
                 +lls+qsLl epn+ spln++aa+l+ kd+ eyk+  
  EPX70924.1 132 ILLSLQSLLGEPNNASPLNAQAAELWGKDPVEYKRLL 168
                 *********************************9876 PP

>> UEV  UEV domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.1   1.8e-08   8.3e-05      29     120 ..      57     148 ..      38     149 .. 0.69

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 1.8e-08
                 EEEEEEEEEEE..E-SSSTTS-EEEEEEE--TTTTTS--EEEE-GCC--TSGGGGGB-TTSBB--HHHHS.--TTT--HHHHHHHHHH...-----XX CS
         UEV  29 sklllnlkGti..pvkykgatyniPiliwvlesyPveaPivyvkptksmvikknenvdaqGlvylpyLee.Wkreksnlvslvqelaq...afeeesP 120
                 + +ll+ +Gti  pv      +++ i +  + +yP++aP+++ ++        + nvd +G++ l++L++ W+   +n+ +++ +l++     ++ sP
  EPX70924.1  57 DSNLLHWAGTItgPVDTYYEGLKFKISMNFPANYPFSAPTIVFTSPMW-----HPNVDMSGNICLDILKDkWSA-VYNVQTILLSLQSllgEPNNASP 148
                 456777777763333333335788999************987655444.....579************852666.66655554444442226666665 PP

>> RWD  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   5.5e-07    0.0025      46      98 ..      59     125 ..       3     142 .. 0.69

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 5.5e-07
                 ...............TT-CEEEEEEEEE-SSTTSS--EEEEEECCSS-HHHHHH..HHHHHHHHHHH CS
                 x............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxx RF
         RWD  46 e............feekkkpslkleiklpeeYPeeaPiislsstenlpkeqvks..leekleelaee 98 
                 +            ++  +  ++k+ + +p +YP +aP i ++s+ + p+ +++   + + l+++++ 
  EPX70924.1  59 NllhwagtitgpvDTYYEGLKFKISMNFPANYPFSAPTIVFTSPMWHPNVDMSGniCLDILKDKWSA 125
                 0555666666665566677899*********************998888888776555666666665 PP

>> UFC1  Ubiquitin-fold modifier-conjugating enzyme 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   5.1e-05      0.23      52     114 ..      55     118 ..      12     137 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 5.1e-05
        UFC1  52 esnkegtkwkGkcwyvhel..kkyefdlefdipvtypataleialpeldgktakmyrgGkiclti 114
                 +s+++  +w G+     ++  +  +f+++++ p++yp +a+ i + +       +   G+icl+i
  EPX70924.1  55 DSDSNLLHWAGTITGPVDTyyEGLKFKISMNFPANYPFSAPTIVFTSPMW-HPNVDMSGNICLDI 118
                 566677778887655444311456899***************99876443.34455578888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (178 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       447  (0.0249317); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.28s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 1105.18
//
Query:       EPX70925.1  [L=494]
Description: CAMK/CAMKL/CHK1 protein kinase Chk1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      8e-68  228.6   0.0    1.1e-67  228.2   0.0    1.2  1  Pkinase      Protein kinase domain
    2.3e-25   89.4   0.0    3.6e-25   88.7   0.0    1.2  1  Pkinase_Tyr  Protein tyrosine kinase
    1.7e-07   30.9   0.0    2.7e-07   30.2   0.0    1.2  1  Kinase-like  Kinase-like
     0.0017   17.8   0.0     0.0029   17.0   0.0    1.3  1  Kdo          Lipopolysaccharide kinase (Kdo/WaaP) family
  ------ inclusion threshold ------
       0.16   11.9   0.0       0.33   10.8   0.0    1.5  1  APH          Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  228.2   0.0   3.1e-71   1.1e-67       1     264 []      10     272 ..      10     272 .. 0.94

  Alignments for each domain:
  == domain 1  score: 228.2 bits;  conditional E-value: 3.1e-71
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.....HHHHHHHHHHHHHS.CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHS CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.....kkvlrEikilkklk.hpnivrlyevfeekdelylvleyveggeladllerkg 93 
                 y+  +++G+G+f++V  ++ +e+ ki+AvK i+k+ a+k +      +++++E+++++ ++ h+ni+++y++ e+ ++++l le+++gg+l+d +e ++
  EPX70925.1  10 YHIGREIGTGAFASVRICY-DENAKIYAVKFINKKFATKCMGsnvwaRRIASEVQLHRLCNgHKNIIHFYDTAENLHWRWLTLEFAQGGDLFDKIEPDV 107
                 7899***************.69*****************9998999999************************************************** PP

                 S--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS...BCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHH CS
     Pkinase  94 slseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk...ltsfvgtseYlAPEvlkeneyskkvDvWslGvilye 189
                  ++e+ a+++++q++eg++++Hskg+ HrDlKpeNiL+d +g+lK++DFG+a+ +  + k   l+s vg++ Y APE+  ++  ++k+D+Ws+G+il+ 
  EPX70925.1 108 GVDEDVAQFYFAQLMEGISFMHSKGVAHRDLKPENILLDYNGNLKLSDFGFASLYAYKGKtrlLNSPVGSPPYAAPEIT-GQYDGAKADIWSCGIILFA 205
                 *******************************************************9999999***************98.5555*************** PP

                 HHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 190 lltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 ll+g++p+ +  +++  +  +++        + ++ ++  ++ +s+ a ++++ ll+ dp+kR++++ +lqhp+l
  EPX70925.1 206 LLSGNTPWDEAISNTGDYLVYRK--------QGERPSSYPWNRLSPGAYSVITGLLRTDPSKRFSIKRILQHPWL 272
                 *********66665555555555........355789999**********************************7 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.7   0.0     1e-28   3.6e-25       2     257 ..      11     268 ..      10     269 .. 0.83

  Alignments for each domain:
  == domain 1  score: 88.7 bits;  conditional E-value: 1e-28
                  EEEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHH..HHHHHHHHHHHHTS.-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTC CS
  Pkinase_Tyr   2 elgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateee..keelleeakimkkl.khpnivkllgvctkeepllivteyvkgGdLlkfLrkke 96 
                  ++g+++G Gaf++V  ++ + + +   vk + K++  +++ ++   +++ +e+++ + +  h+ni++++    + +  ++ +e+++gGdL + ++ + 
   EPX70925.1  11 HIGREIGTGAFASVRICYDE-NAKIYAVKFINKKFATKCMGSNvwARRIASEVQLHRLCnGHKNIIHFYDTAENLHWRWLTLEFAQGGDLFDKIEPD- 106
                  5789**********999888.44444455555555555555555578999*****999999*************9*******************997. PP

                  TTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHH CS
  Pkinase_Tyr  97 kekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfGvl 194
                     ++ +    + +q+ +G+++++sk + Hrdl   N+Ll+ n   k+sDfG a+    + +++  ++   +  + apE+  +     k+D+Ws G++
   EPX70925.1 107 -VGVDEDVAQFYFAQLMEGISFMHSKGVAHRDLKPENILLDYNGNLKLSDFGFASLYAYKGKTRLLNSPVGSPPYAAPEITGQYD-GAKADIWSCGII 202
                  .5666666666789*******************************************8999999999999999******876665.679********* PP

                  HHHHHTTSSGTTTTS.HHHH.HHHHHHTTEES-BB..TTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 195 lwEiftlgespypgl.knee.vleklkegkrlekp..ekcpeelyelmkkcweedpeeRptfselve 257
                  l+ +++ g++p+ +  +n+   l + k+g+r +    +  ++  y++++  +++dp++R +++++++
   EPX70925.1 203 LFALLS-GNTPWDEAiSNTGdYLVYRKQGERPSSYpwNRLSPGAYSVITGLLRTDPSKRFSIKRILQ 268
                  ******.*****99865544144455777775543125688999****************9999976 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   0.0   7.5e-11   2.7e-07     142     259 ..     111     222 ..     100     235 .. 0.84

  Alignments for each domain:
  == domain 1  score: 30.2 bits;  conditional E-value: 7.5e-11
  Kinase-like 142 etiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggf..taLvragtkvvl..seve.kgfaPpEllgsrggytrknktkmthkldaW 234
                  e++a+ +  +ql+  +  +++kg+ h +++++n+lld +g l+l +f   +L+ ++ k +l  s v    +a pE++g+  g           k d W
   EPX70925.1 111 EDVAQFYF-AQLMEGISFMHSKGVAHRDLKPENILLDYNGNLKLSDFgfASLYAYKGKTRLlnSPVGsPPYAAPEITGQYDG----------AKADIW 197
                  56666676.7888888899*************************9752279*******999655555567999****99444..........688*** PP

  Kinase-like 235 qlGlviyriwclklPltlateeake 259
                    G+  + + + + P ++a ++ + 
   EPX70925.1 198 SCGIILFALLSGNTPWDEAISNTGD 222
                  *****************99887765 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0     8e-07    0.0029     115     155 ..     109     149 ..      71     162 .. 0.79

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 8e-07
         Kdo 115 laeelkrallkavgrliaklhragvnHadlyaknillqqee 155
                 ++e + +  + ++   i+ +h+ gv H+dl + nill+ ++
  EPX70925.1 109 VDEDVAQFYFAQLMEGISFMHSKGVAHRDLKPENILLDYNG 149
                 677788888888889999*******************9987 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   9.3e-05      0.33     163     197 ..     128     160 ..      63     163 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 9.3e-05
                 SS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-E CS
         APH 163 elptvllHgDlhpgNllvdpddgrvtGviDfedag 197
                   ++++ H+Dl+p N+l+d +++    + Df++a+
  EPX70925.1 128 MHSKGVAHRDLKPENILLDYNGNLK--LSDFGFAS 160
                 6678999************444433..77888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (494 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       372  (0.0207485); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.45
# Mc/sec: 3307.09
//
Query:       EPX70926.1  [L=310]
Description: phosphopantothenate-cysteine ligase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-20   74.3   0.0    1.1e-12   48.2   0.0    2.1  2  DFP       DNA / pantothenate metabolism flavoprotein


Domain annotation for each model (and alignments):
>> DFP  DNA / pantothenate metabolism flavoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.0   1.6e-09   2.9e-05       4      53 ..      38      89 ..      35     100 .. 0.87
   2 !   48.2   0.0   6.1e-17   1.1e-12      80     174 ..     168     266 ..     158     278 .. 0.88

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 1.6e-09
                -EEEEEES-EEEECCT..TEEEEE----HHHHHHHHHHHHTT-EEEEEE-S- CS
         DFP  4 kkvlvtaGpTrEaiDp..VRfisNrSSGkmGyalAeaaaarGaeVtlvsgpv 53
                + vlvt+G+T  ++ +  VR+i N S G  G+a Ae ++++G  V +   + 
  EPX70926.1 38 NVVLVTSGGTLVPMEKnmVRYIDNFSAGNRGAASAEYFCKAGYAVIFLYRNY 89
                569*********997555***************************9887665 PP

  == domain 2  score: 48.2 bits;  conditional E-value: 6.1e-17
                 HTT-SEEEE---S--EEE..S-------------..----EEE---HHHHHHHC-S.S-EEEEEEE-S.S.-HHHHHHHHHHHTT-SEEEEEEGGGTTG CS
         DFP  80 lkeadivimaAAvaDyrp..keaaeeKikkeeeeeeltleleknpdilaelaekkkkkqllvGFaaet.e.ellenareklerkgldlivaNdvskeea 174
                 l++  ++  aAAv+D+++  ++ +e+Ki+  +++++l+l++++ p+ l+ l ++ +++ l++ F++et e  l+++ar+ l+r + +l++aN ++++++
  EPX70926.1 168 LRSRALFYLAAAVSDFHIpaQDMSEHKIQSGAGKDKLELSMRPVPKFLRYLVDSWAPEALIISFKLETdEnILIQKARAALHRYNHQLVIANLLTTRKK 266
                 556678899*******98778899***************************999999999********645789******************9988754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       492  (0.0274416); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.29s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 1936.81
//
Query:       EPX70927.1  [L=89]
Description: hypothetical protein SOCG_01148 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.8e-13   48.3   4.4    1.1e-12   47.8   4.4    1.3  1  Cmc1      Cytochrome c oxidase biogenesis protein Cmc1 like
  ------ inclusion threshold ------
      0.018   15.1   3.1      0.036   14.1   3.1    1.6  1  CX9C      CHCH-CHCH-like Cx9C, IMS import disulfide relay-sys
        0.2   12.1   8.5        3.9    7.9   8.5    2.0  1  DUF3128   Protein of unknown function (DUF3128)


Domain annotation for each model (and alignments):
>> Cmc1  Cytochrome c oxidase biogenesis protein Cmc1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.8   4.4   1.9e-16   1.1e-12       2      66 ..      14      84 ..      13      87 .. 0.81

  Alignments for each domain:
  == domain 1  score: 47.8 bits;  conditional E-value: 1.9e-16
        Cmc1  2 hkklkkkarkeCaelikalaeChkdrllkvvgkCneekeamkkClkeyrtderl......kdaekdriiek 66
                + +++++ +k+C+++i+++++C+ +r+++v++kC+e+ + mk Cl ++  + ++      ++ ek++ +++
  EPX70927.1 14 RSIYQQEVKKNCQKEIEDFVQCATGRTISVLWKCREQSHIMKGCLQKTIDQTSEwrlrsqQEGEKQKAYKE 84
                67889999*************************************99866655555555555555555555 PP

>> CX9C  CHCH-CHCH-like Cx9C, IMS import disulfide relay-system,
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   3.1   6.1e-06     0.036       4      41 ..      21      59 ..      19      62 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 6.1e-06
        CX9C  4 vakyCpkefeaYhkCvssn.qswpekCkeqkkeLakCik 41
                v k+C+ke e + +C +    s   kC eq   +  C +
  EPX70927.1 21 VKKNCQKEIEDFVQCATGRtISVLWKCREQSHIMKGCLQ 59
                89**************99978888899999888888876 PP

>> DUF3128  Protein of unknown function (DUF3128)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   8.5   0.00065       3.9      21      62 ..      13      73 ..       8      89 .] 0.67

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.00065
     DUF3128 21 fkqyYryGeldnCsekwedfkfClklk...................tkksekiqeilkkre 62
                ++++Y   + +nC+++ edf++C + +                   +k+ ++  e+  +++
  EPX70927.1 13 LRSIYQQEVKKNCQKEIEDFVQCATGRtisvlwkcreqshimkgclQKTIDQTSEWRLRSQ 73
                688999999***************9998888887766666666555333333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1080  (0.0602376); expected 358.6 (0.02)
Passed bias filter:                      366  (0.0204139); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.43
# Mc/sec: 622.23
//
Query:       EPX70928.1  [L=280]
Description: ubiquinol cytochrome-c reductase assembly protein Cbp3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.6e-33  115.1   0.2    3.5e-33  114.6   0.2    1.1  1  Ubiq_cyt_C_chap  Ubiquinol-cytochrome C chaperone


Domain annotation for each model (and alignments):
>> Ubiq_cyt_C_chap  Ubiquinol-cytochrome C chaperone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.6   0.2     2e-37   3.5e-33       2     136 ..     126     263 ..     125     267 .. 0.97

  Alignments for each domain:
  == domain 1  score: 114.6 bits;  conditional E-value: 2e-37
  Ubiq_cyt_C_chap   2 elgvpdtfagrfqllvlhtwlllrRlkaeg.pegreieqelldkffedvdeklreegvgdlsv..pkrmkklaeafygrllaydealgsddaaL 92 
                      ++ vp tf+++fq++ lh+w+l  R+++ + +e+++++q+l+ +ffed++ ++++  + ++ +  + ++k+l+++  g+++ yd+++   da+L
       EPX70928.1 126 RCEVPMTFQSWFQITQLHLWILQTRIRGLQpQEKQALSQALVTRFFEDMEFRIHKDYRINSDRitGMYLKDLFQQQTGAIFGYDQSMLGNDAVL 219
                      799***************************8888**************************9999****************************** PP

  Ubiq_cyt_C_chap  93 aaalwrnvykaslevdleklaglvgyvraqlatlsalageallv 136
                      a+a+wrn++ +s++vdl++l ++v++vr  + +ls+++ e++++
       EPX70928.1 220 ATAIWRNLFAGSQNVDLSILSEIVAFVRLNVFELSNISNEEFMS 263
                      ******************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       400  (0.0223102); expected 358.6 (0.02)
Passed bias filter:                      293  (0.0163422); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2036.30
//
Query:       EPX70929.1  [L=255]
Description: TIP41-like type 2a phosphatase regulator Tip41 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-49  168.3   0.0    1.3e-49  168.0   0.0    1.1  1  TIP41     TIP41-like family


Domain annotation for each model (and alignments):
>> TIP41  TIP41-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  168.0   0.0     7e-54   1.3e-49       1     171 [.      42     217 ..      42     218 .. 0.95

  Alignments for each domain:
  == domain 1  score: 168.0 bits;  conditional E-value: 7e-54
       TIP41   1 mvFgnnlleleheksgvklefnaldaLkavkkeeee..kvayakewkksrkkk...kevvkpyDwtytteYkGtl.eeklkveeteeeiplekLkrkdp 93 
                 m+Fg+nl+++  ++s + + f ++daL++v k + e  +v++a+ew ksr+k+     vv+pyDwty teY+Gt+ + +l +++ +++ip +++ +   
  EPX70929.1  42 MTFGKNLITVFYKDSPI-YGFFTKDALEMVGKGSGElmQVSFAEEWIKSRTKTgesFPVVSPYDWTYYTEYQGTIlDGNLCFKDVQDQIPAAEILQAGS 139
                 9*********9997775.9**************9999*************9995545567**************97778999***************** PP

       TIP41  94 ilfydevvLyedeLadnGisllsvkvrvmpeclllLlRfflRvDnvlvrvrdtrvyvefeseevlrevkekeakyeev 171
                  l+y+e++L+edeLadnG ++++v+vrv++ +l+lL+R+++R+Dnv+vrv++tr+y++++ +++l+++++ke++ye+v
  EPX70929.1 140 NLWYSELILFEDELADNGKAMFDVRVRVVKGHLILLARLVMRLDNVIVRVNETRIYIDLNGNRILKDFRKKESNYESV 217
                 ***************************************************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       416  (0.0232026); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1792.79
//
Query:       EPX70930.1  [L=884]
Description: medial ring protein Mid1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.5e-05   23.4   0.1    0.00028   21.4   0.0    2.1  2  PH        PH domain


Domain annotation for each model (and alignments):
>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1      0.38   6.8e+03      32      65 ..     141     177 ..     136     190 .. 0.74
   2 !   21.4   0.0   1.5e-08   0.00028       2     102 ..     767     862 ..     766     864 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.38
                 EESST......TCTTESSEEEEEESTTEEEEEEECTTSSS CS
          PH  32 yyknd......ksekdkepkgsislsncevvevvatedpk 65 
                 +yk+d      ++e +  p+++i  +++ ++++    ++k
  EPX70930.1 141 VYKDDavsdiqDDEYADIPQRIIYSNGAASQDDS---SEK 177
                 6888888888888899999999999999999743...333 PP

  == domain 2  score: 21.4 bits;  conditional E-value: 1.5e-08
                 EEEEEEEEETSSSSCSEEEEEEEEETTEEEEESSTTCTTESSEEEEEESTTEEEEEEECTTSSSSTSEEEEEESTSSSTEEEEEEESSHHHHHHHHHHH CS
          PH   2 vkeGwLlkkgsgkkkswkkrwfvLkdsellyykndksekdkepkgsislsncevvevvatedpkrkfcfelriverngsrtyllqasseeerkeWikai 100
                 +keG+++  +++   s ++r++vL+++++++y ++ ++    +k + +++++++ +++ +e+ +   +  + + +++g  ++ ++ +se e+++Wi+a+
  EPX70930.1 767 YKEGYIYILEGT---SVRRRFAVLSSKKISLYTDKGGDFLLGLKAVGNVRSLSIADCD-KEMLNLGITMGILMITDKG-VRVKFYSDSEKECTKWIEAL 860
                 799999999988...88******************33333333444444444444443.6699999999999999999.******************** PP

                 HH CS
          PH 101 qs 102
                 ++
  EPX70930.1 861 NA 862
                 96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (884 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       490  (0.02733); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.27s 00:00:00.91 Elapsed: 00:00:00.45
# Mc/sec: 5839.89
//
Query:       EPX70931.1  [L=289]
Description: complexed with Cdc5 protein Cwf20 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.4e-11   44.0   2.7    4.4e-11   44.0   2.7    1.9  2  PRCC      Mitotic checkpoint regulator, MAD2B-interacting


Domain annotation for each model (and alignments):
>> PRCC  Mitotic checkpoint regulator, MAD2B-interacting
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.1      0.07   1.3e+03      78      78 ..      84      84 ..       4     147 .. 0.51
   2 !   44.0   2.7   2.5e-15   4.4e-11      34     214 .]     103     289 .]      97     289 .] 0.72

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.07
        PRCC 78 t 78
                 
  EPX70931.1 84 V 84
                0 PP

  == domain 2  score: 44.0 bits;  conditional E-value: 2.5e-15
        PRCC  34 eaeeseeedppetepepasqpeaenadleakkaakssea..mvpepteqdpvkensknypgyyllpsg.......sqqpqedasdlnlddealrqLlGr 123
                 +++ s+ e++    +e ++ ++++ adl+++ ++ ++ +          ++  ++ ++ +gy+ +++        +q ++++ s ++l +  +  L+  
  EPX70931.1 103 KSKRSDIEAEVVYGSEKPNVDDTSAADLQFDANNVNTDSisL------FNVSAPYKESREGYTSDEQNyepvfvkPQRKKQRVSTQSLKEGDITSLQPF 195
                 445555566666677789999999999999988877655542......333445555666666666666668776555666888889999888888854 PP

        PRCC 124 rgg.nrkreeikeakiieinedeelkaneqwlakalteekaekk..gnpvrgqakrKHQltyLahqAkeneeeLeeswAenrrnRkqaqaKYGF 214
                 + + ++ +   +ea+iie   +e+       + +  t+ ++e    +  ++++a+++HQl++L+ +A +++e  e  + ++r+n+k +++ YGF
  EPX70931.1 196 SHTrDTEKPPSSEADIIEGRRKEKVRLIDVDMNQLPTVDPQEATsvTPSIKSVAPGRHQLSSLVGMAVSQKESFETYFEQQRANKKASSKSYGF 289
                 4334455555666777777777777555555555555555544478999********************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       528  (0.0294495); expected 358.6 (0.02)
Passed bias filter:                      276  (0.0153941); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.31s 00:00:00.76 Elapsed: 00:00:00.45
# Mc/sec: 1946.43
//
Query:       EPX70932.1  [L=546]
Description: MatE family transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      3e-61  205.8  36.8    1.5e-32  112.4   7.3    2.7  4  MatE           MatE
  ------ inclusion threshold ------
        5.3    7.4   8.4        2.5    8.5   0.1    3.0  3  DUF3446        Early growth response N-terminal domain


Domain annotation for each model (and alignments):
>> MatE  MatE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.4   7.3   1.7e-36   1.5e-32       1     161 []     110     270 ..     110     270 .. 0.99
   2 ?   -3.5   0.2      0.81   7.3e+03      74      92 ..     288     306 ..     282     316 .. 0.57
   3 !  107.5  12.6   5.9e-35   5.3e-31       1     160 [.     332     492 ..     332     493 .. 0.98
   4 ?   -3.5   0.1      0.78     7e+03      77      93 ..     506     518 ..     502     537 .. 0.54

  Alignments for each domain:
  == domain 1  score: 112.4 bits;  conditional E-value: 1.7e-36
        MatE   1 PialenllesllslidtllvgrlgskalAavsialsilsllfv.fllglstalttlvgqalGaknfkrakealrqglilllllsliiallvllfseqil 98 
                 P++l++l ++   +i+++ +g+lg+++l+a+s++++++ ++ + +  g+ +al+tl +q++G++n++ ++  l+++l +l ll ++i+++ ++++e+il
  EPX70932.1 110 PVVLTSLRQYGEVIITVFSLGHLGKTELSAASLSNMTATITAFaIYQGIVSALDTLGTQCFGSGNYELVGLHLQRILSVLCLLQIPIIFV-WWNIEPIL 207
                 999**************************************999**********************************************.******** PP

        MatE  99 slftqdeevlelakrylrililgipalalqlvlsgilrgagktkvplyislislllniplnyl 161
                  +f+qd++ ++la ry+++l+l  pa+al++ l+++l+ +g++ +++ i+++ ++lni+lnyl
  EPX70932.1 208 LFFKQDPTTCYLAGRYMKVLLLASPAYALFESLKRFLQVQGIFQPVTNILAFIVPLNILLNYL 270
                 **************************************************************7 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 0.81
        MatE  74 qglilllllsliiallvll 92 
                 +++ l +++++++  +v++
  EPX70932.1 288 VTITLWMACAILLWYIVYV 306
                 4444555555555555555 PP

  == domain 3  score: 107.5 bits;  conditional E-value: 5.9e-35
        MatE   1 PialenllesllslidtllvgrlgskalAavsialsilsllfvfllglstalttlvgqalGaknfkrakealrqglilllllsliiallvllfseqils 99 
                 P +++ + e++ + ++t+++g lg+++lA++s+ ++++s+ +++++g+++a++t+vg+ +Ga+n+k ak ++++++ +++l++l i+ ++++f++++++
  EPX70932.1 332 PGVVMICSEYWAFELLTFVAGVLGTTDLASMSVLSTTSSVSYTIAFGVAAAAATRVGNLIGAGNTKLAKLSTYVAVSVAALIGLCITSMMVIFRNHWAY 430
                 557899********************************************************************************************* PP

        MatE 100 lftqdeevlelakrylrililgipalalqlvlsgilrgagktkvplyislisl.llniplny 160
                 lft+d++v++l+++++++ +l  +a+  q+v+ g+lrg+g+++++ +++++++ +l +p++ 
  EPX70932.1 431 LFTSDKDVVQLVAKLVPLCALMNIADNTQCVAGGVLRGQGRQRIGGIVNFVAYyILALPIAI 492
                 **********************************************************9986 PP

  == domain 4  score: -3.5 bits;  conditional E-value: 0.78
        MatE  77 illlllsliiallvllf 93 
                 ++++ ++++++    + 
  EPX70932.1 506 WVGITVAVFVI----AA 518
                 33333333333....33 PP

>> DUF3446  Early growth response N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   1.5     0.037   3.3e+02      40      56 ..      73      89 ..      35     101 .. 0.64
   2 ?   -1.3   0.0      0.31   2.8e+03      16      42 ..     119     146 ..     110     156 .. 0.65
   3 ?    8.5   0.1   0.00027       2.5      12      47 ..     338     372 ..     329     388 .. 0.71

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.037
     DUF3446 40 sssssssssssssspsl 56
                 +   ssss+s+ss ++
  EPX70932.1 73 EAGRESSSSASASSEEI 89
                44445555555555544 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.31
     DUF3446  16 waeellslvs.glvgvanppsspsssss 42 
                 + e ++ ++s g +g ++ ++++ s  +
  EPX70932.1 119 YGEVIITVFSlGHLGKTELSAASLSNMT 146
                 5556999999999988664444444322 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.00027
     DUF3446  12 snslwaeellslvsglvgvanppsspssssssssss 47 
                 ++  wa ell  v+g++g++  +s  s  s++ss+s
  EPX70932.1 338 CSEYWAFELLTFVAGVLGTTDLASM-SVLSTTSSVS 372
                 4778***************754322.2233333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (546 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       759  (0.0423336); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.27s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 3732.67
//
Query:       EPX70933.1  [L=437]
Description: histone lysine methyltransferase Set9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.3e-10   41.1   1.7    3.5e-08   34.0   0.0    3.0  4  SET             SET domain
  ------ inclusion threshold ------
      0.046   13.7   0.8      0.046   13.7   0.8    3.1  4  zinc-ribbons_6  zinc-ribbons
      0.053   13.6   3.7       0.19   11.9   3.7    2.0  1  Zn-ribbon_8     Zinc ribbon domain


Domain annotation for each model (and alignments):
>> SET  SET domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.1     0.012        70     144     164 ..     115     140 ..      84     142 .. 0.64
   2 !    4.4   0.0    0.0074        44       3      21 ..     127     145 ..     125     173 .. 0.73
   3 !   34.0   0.0   5.9e-12   3.5e-08     126     168 ..     182     220 ..     154     221 .. 0.88
   4 ?   -0.4   0.1      0.22   1.3e+03      65      84 ..     333     345 ..     236     424 .. 0.61

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.012
                 E.....TTSSEEEEEESSXBXTTEEE CS
                 x.....xxxxxxxxxxxxxxxxxxxx RF
         SET 144 v.....lrgprvavfAtrdIkkGeEl 164
                       ++  +++v+A+ +I++G+ +
  EPX70933.1 115 TnryftSTKHEACVIAREPIPAGDDI 140
                 23333456788888888888888766 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.0074
                 EEEESSXBXTTXEEEEEEE CS
                 xxxxxxxxxxxxxxxxxxx RF
         SET   3 GvfAtedIpkgeficeype 21 
                 +v+A+e+Ip+g+ i+ +  
  EPX70933.1 127 CVIAREPIPAGDDILDLSG 145
                 79**********9987664 PP

  == domain 3  score: 34.0 bits;  conditional E-value: 5.9e-12
                 GGGCEEXSSSSEEEEEEEETTSSEEEEEESSXBXTTEEEEEXT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         SET 126 arflNHsCdpNcnltvqnvlrgprvavfAtrdIkkGeEltidY 168
                 arf+NH+Cd Nc  ++    +g+r+ + + ++I +G+E+t  Y
  EPX70933.1 182 ARFVNHDCDANC--RFNT--SGRRIWLKSVKPILPGQEITTFY 220
                 5***********..6666..69******************999 PP

  == domain 4  score: -0.4 bits;  conditional E-value: 0.22
                 HHHHHHHHHHHHHHHHHTHH CS
                 xxxxxxxxxxxxxxxxxxxx RF
         SET  65 qklakdqkqaekedtdaalk 84 
                 +       +a+k++++++  
  EPX70933.1 333 E-------EAMKSKRKKDFD 345
                 2.......222222222222 PP

>> zinc-ribbons_6  zinc-ribbons
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.6       2.1   1.3e+04      43      56 ..     111     124 ..     107     127 .. 0.70
   2 ?   -6.3   4.0         3   1.8e+04      30      37 ..     232     239 ..     226     243 .. 0.58
   3 ?   13.7   0.8   7.6e-06     0.046      35      61 ..     347     373 ..     335     378 .. 0.84
   4 ?    1.6   0.4     0.048   2.8e+02      13      27 ..     377     391 ..     372     395 .. 0.72

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 2.1
                     EETTEEEE--TTTT CS
  zinc-ribbons_6  43 kaCgavdyfCnkcn 56 
                     + C++  yf ++ +
      EPX70933.1 111 EICSTNRYFTSTKH 124
                     56888888876655 PP

  == domain 2  score: -6.3 bits;  conditional E-value: 3
                     EE-SSS-S CS
  zinc-ribbons_6  30 alCpeCeq 37 
                      lC +Ce+
      EPX70933.1 232 CLCFTCEK 239
                     44555554 PP

  == domain 3  score: 13.7 bits;  conditional E-value: 7.6e-06
                     S-S---EEEETTEEEE--TTTT----T CS
  zinc-ribbons_6  35 CeqelevlkaCgavdyfCnkcneLiSk 61 
                      ++el++ + Cg+v+y C++c++L   
      EPX70933.1 347 FQKELKRRRLCGKVEYACSDCQGLFNE 373
                     578999*****************9755 PP

  == domain 4  score: 1.6 bits;  conditional E-value: 0.048
                     -SSEEE-TTT--EEE CS
  zinc-ribbons_6  13 rgeqyhCeaCqedlk 27 
                     +   ++C++C++++ 
      EPX70933.1 377 QAPDTRCQKCSRHFY 391
                     556789999999875 PP

>> Zn-ribbon_8  Zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   3.7   3.1e-05      0.19       5      33 ..     361     387 ..     361     390 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 3.1e-05
  Zn-ribbon_8   5 eYrCeeCghefevlqsisdapltaCPeCg 33 
                  eY C +C+  f++    ++ap+t C +C 
   EPX70933.1 361 EYACSDCQGLFNESS--TQAPDTRCQKCS 387
                  8***********654..5999*******6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (437 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       822  (0.0458475); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 2985.17
//
Query:       EPX70934.1  [L=120]
Description: eukaryotic protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-12   46.5   0.0    8.1e-12   45.2   0.0    1.7  1  BolA      BolA-like protein


Domain annotation for each model (and alignments):
>> BolA  BolA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.2   0.0   4.5e-16   8.1e-12       2      75 ..      44     108 ..      43     109 .. 0.84

  Alignments for each domain:
  == domain 1  score: 45.2 bits;  conditional E-value: 4.5e-16
        BolA   2 tealkpehlevedeShkhaghaeaggetHFkvvivseaFegkslvarhRlvyalLkeelakgiHALslktktpe 75 
                 +e+l p++l v+d S        +g+++ +++vi s+ F+gk+++a+hRlv+++Lkee+++ +H L+l t   e
  EPX70934.1  44 NERLCPSSLRVIDVS--------GGCGSMYQIVIKSKLFKGKNTLAQHRLVNSILKEEIKG-MHGLNLLTEVDE 108
                 566666666666666........578999******************************99.****99887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       343  (0.019131); expected 358.6 (0.02)
Passed bias filter:                      298  (0.0166211); expected 358.6 (0.02)
Passed Vit filter:                         9  (0.00050198); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.45
# Mc/sec: 803.18
//
Query:       EPX70935.1  [L=626]
Description: inositol 1,3,4,5,6-pentakisphosphate kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-22   80.9   2.8      2e-19   70.2   2.8    3.3  1  Ins_P5_2-kin  Inositol-pentakisphosphate 2-kinase


Domain annotation for each model (and alignments):
>> Ins_P5_2-kin  Inositol-pentakisphosphate 2-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.2   2.8   1.1e-23     2e-19       1     331 [.     380     603 ..     380     604 .. 0.85

  Alignments for each domain:
  == domain 1  score: 70.2 bits;  conditional E-value: 1.1e-23
                   EEEE-SSEEEEEE-SS-TTTTTEEEEEEEEESTSHHHHT-SSHHHHHHHHHHHTTHHHHT..STSB---EEEEE-HHHHHHHHHHHGGGS-HHHHHH CS
  Ins_P5_2-kin   1 YlgEGaaniVfsytgsspsalgkvLRlrKapksekdseskaeseeeslsfvrkvispllg..seylvdqelvrldrefleelnekleaerpaaRrrk 95 
                   +l+ G an+Vf+y g++p + +kvLRlr+  +        + s+e+++++++++i pl++  ++yl +  l  ++++fl   +++            
    EPX70935.1 380 FLASGTANVVFEYIGKNPFFQDKVLRLRRRGQ--------TISTEQVYDYYQNTIYPLFSgfEQYLIEIYLQPVTKDFLLGTQNASGIF-------- 460
                   5789************9999999*********........999************************************6555554333........ PP

                   EEE-TT-SEEEEEE-TTSSSSSTS-EEEEEE-----S..---STTS-GGGGGGGTS-HHHHHHHHHHHTTSSSS--S--HHHHTSS-HHHHHHHHHH CS
  Ins_P5_2-kin  96 aevdvakecallleDltllpgsksktitvEiKPKwGflqspsaplsaetkeikkrvcrfcahqalklkegkieeiskycPldLfsgdearvrralea 192
                     +++++++++l++Dl+ +          E+KPKw ++qsp ap ++        vcr+ca+++++      + i ++cPl+L   d +   + l+ 
    EPX70935.1 461 --LNLNESFCILMQDLKEG---------MEMKPKW-LTQSPAAPDDW-------VVCRTCAMSRMR-----GKPI-SFCPLQL---DYNNWPKFLSV 529
                   ..345667********864.........69*****.***********.......************.....3555.9******...55555555555 PP

                   HHHS-TTTEEEEETTEEHHHHHHHHHHHHHTHHHHHHHHHTT-SSHHHHHHHHHH.HHHH.....HHHTS-HHHHHHHHHHHHHHHHHHH-EEEEEE CS
  Ins_P5_2-kin 193 llktpqNnlkvflngklkfvellleaLlessvLerLlqlQkldrlDiegllklykkeeekkeessleesesleealelldkyllaatlkDCSimirl 289
                    +                +   ++ +L +s +L+rL++lQ  ++++                                 ++  la+tl+D +++i  
    EPX70935.1 530 FQG--------------MVGPEIALTLFQSGILKRLRDLQ--EEYS--------------------------------RKDVALAMTLRDVTLYIGK 578
                   555..............445678888888***********..3444................................256789**********996 PP

                   SS--SEEEEETTTTEEEEEEEEEE------TT.HHHHHHHHHH CS
  Ins_P5_2-kin 290 sssaesrelsqsrgrafsyevkviDLDpKsak.klekwvkldr 331
                                      +++++DLDpK ++ kl+kw++ +r
    EPX70935.1 579 ------------------DKITLLDLDPKDIHtKLAKWERDER 603
                   ..................5899********999*****99887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (626 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1138  (0.0634726); expected 358.6 (0.02)
Passed bias filter:                      741  (0.0413297); expected 358.6 (0.02)
Passed Vit filter:                        69  (0.00384851); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.71u 0.28s 00:00:00.99 Elapsed: 00:00:00.47
# Mc/sec: 3997.25
//
Query:       EPX70936.1  [L=171]
Description: ribosomal protein subunit L12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.6e-23   80.5   9.5    2.6e-21   75.7   5.0    2.2  2  Ribosomal_L12    Ribosomal protein L7/L12 C-terminal domain
    1.1e-16   60.3   3.5    1.1e-16   60.3   3.5    2.3  2  Ribosomal_L12_N  Ribosomal protein L7/L12 dimerisation domain
  ------ inclusion threshold ------
       0.89   10.2   9.3      0.084   13.5   4.0    2.0  2  Ribosomal_60s    60s Acidic ribosomal protein
        1.4    9.1   5.5         14    5.8   0.1    2.4  2  Myc-LZ           Myc leucine zipper domain


Domain annotation for each model (and alignments):
>> Ribosomal_L12  Ribosomal protein L7/L12 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.1   0.1    0.0016         7      18      41 ..      44      67 ..      37      77 .. 0.88
   2 !   75.7   5.0   5.7e-25   2.6e-21       2      66 ..     105     170 ..     104     171 .] 0.96

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0016
                   HHHHHH---HHHHHHHHTTTTSTE CS
  Ribosomal_L12 18 aVreitglgLkeaKdlVeaapkvv 41
                    V ei  l+L e  +lVe++ +++
     EPX70936.1 44 LVEEISKLSLLETSKLVEQLKQKL 67
                   5889***************98875 PP

  == domain 2  score: 75.7 bits;  conditional E-value: 5.7e-25
                    EEEEEE-TT-.HHHHHHHHHHHH---HHHHHHHHTTTTSTEEEEE-HHHHHHHHHHHHCTT-EEEE CS
  Ribosomal_L12   2 dViLksagak.KiaVIKaVreitglgLkeaKdlVeaapkvvkegvskeeAeeikkkLeeaGAevel 66 
                    ++ L+s++a  K +VIK+V+++ gl+L++aK++Ve+apkv+ke+v ke+Ae+ik kLe+  ++v+l
     EPX70936.1 105 NLKLESFDAGsKAKVIKEVKSLLGLSLVDAKKFVESAPKVLKENVLKEDAEAIKSKLEQLTCKVTL 170
                    678*****988*****************************************************98 PP

>> Ribosomal_L12_N  Ribosomal protein L7/L12 dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.3   3.5   2.4e-20   1.1e-16       1      47 [.      40      88 ..      40      90 .. 0.88
   2 ?    0.2   0.1      0.14   6.3e+02       6      22 ..     123     139 ..     116     141 .. 0.79

  Alignments for each domain:
  == domain 1  score: 60.3 bits;  conditional E-value: 2.4e-20
                     HHHHHHHHHHTSBHHHHHHHHHHHHHHTTHHHHHHHHHH.H..HHHHHH CS
  Ribosomal_L12_N  1 kieeiieaikeltvLElseLvkalEekFGVsAAAPvavaaa..aaaaaa 47
                     kie+++e+i++l++LE+s Lv++l+ k+++s++AP+a+ +a  +aaa+a
       EPX70936.1 40 KIENLVEEISKLSLLETSKLVEQLKQKLNISDIAPMAAPMAvpGAAAGA 88
                     89*********************************88887775555555 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.14
                      HHHHHTSBHHHHHHHHH CS
  Ribosomal_L12_N   6 ieaikeltvLElseLvk 22 
                      ++++ +l++ +++ +v+
       EPX70936.1 123 VKSLLGLSLVDAKKFVE 139
                      46677899999999886 PP

>> Ribosomal_60s  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   4.0   1.9e-05     0.084      23      69 ..      56     101 ..      34     125 .. 0.58
   2 ?   -0.9   0.2      0.59   2.6e+03      12      32 ..     139     159 ..     130     168 .. 0.52

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.9e-05
                    XXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Ribosomal_60s  23 vkllvkalegk.dieellangaaklaaaaaaaaaaaaaaaaaaaaeek 69 
                    ++ lv+ l++k +i ++   +a    a+++aaa aa++a+ +++ eek
     EPX70936.1  56 TSKLVEQLKQKlNISDIAPMAAPM--AVPGAAAGAAEEANDEPKPEEK 101
                    344444444443555555444433..4444444444444444444444 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.59
                    XXXXXXXXXXXXXXXXXXXXX CS
  Ribosomal_60s  12 kaagveveaarvkllvkaleg 32 
                    ++a + +++  +k +++a++ 
     EPX70936.1 139 ESAPKVLKENVLKEDAEAIKS 159
                    444444444444444444433 PP

>> Myc-LZ  Myc leucine zipper domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   1.5    0.0075        34      18      24 ..      61      67 ..      58      68 .. 0.87
   2 ?    5.8   0.1    0.0032        14      13      27 ..     150     164 ..     145     166 .. 0.80

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.0075
      Myc-LZ 18 EqLKhkL 24
                EqLK+kL
  EPX70936.1 61 EQLKQKL 67
                9*****9 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0032
      Myc-LZ  13 LRkrrEqLKhkLeQL 27 
                 L+   E  K kLeQL
  EPX70936.1 150 LKEDAEAIKSKLEQL 164
                 55557899******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       747  (0.0416643); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 1181.31
//
Query:       EPX70937.1  [L=219]
Description: domain kinase I gamma subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.3e-46  156.8   0.0    4.2e-46  156.0   0.0    1.4  1  CTK3           CTD kinase subunit gamma CTK3
    6.4e-17   61.5   3.0    1.6e-16   60.2   3.0    1.7  1  CTK3_C         CTD kinase subunit gamma CTK3 C-terminus
  ------ inclusion threshold ------
       0.16   11.9   0.1       0.51   10.3   0.0    1.8  2  Ribosomal_L30  Ribosomal protein L30p/L7e


Domain annotation for each model (and alignments):
>> CTK3  CTD kinase subunit gamma CTK3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.0   0.0     7e-50   4.2e-46       1     123 []       1     123 [.       1     123 [. 0.98

  Alignments for each domain:
  == domain 1  score: 156.0 bits;  conditional E-value: 7e-50
                 --HHHHHHHHHHHHTT--SSGGGTHHHHHHHHHTGGGHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHTT--S..THHHHHHHTHHHHHHHHS- CS
        CTK3   1 mDpFEvrsqFsqlLrkLtasvqslqkaaqfAlknkdkeedlfscileqlesadlNtranilyfidllleeslkegqsekspYveslkrdilklvdsvvP 99 
                 mDpFE+r+ F+qlL+kL+as+ s+ k+aqfAlkn++ eedl+sci+e+les+++Ntr+ni+yf+d+l+e slk+g +  s+Y+++++rdilklv+ vvP
  EPX70937.1   1 MDPFEGRMAFLQLLNKLSASQLSQLKPAQFALKNRELEEDLYSCIWEELESGSFNTRVNIIYFVDTLCELSLKNGIN--SGYITMITRDILKLVEYVVP 97 
                 9**************************************************************************99..69****************** PP

                 ..HHHHHHHHHHHHHHHHHHHTTSS- CS
        CTK3 100 ..gsgaaNlksvrkilkslklksllt 123
                    +gaaN+ +vrk+l+sl+lk++++
  EPX70937.1  98 igTAGAANAPEVRKVLHSLRLKNIID 123
                 *99********************986 PP

>> CTK3_C  CTD kinase subunit gamma CTK3 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.2   3.0   2.6e-20   1.6e-16       1      68 [.     153     213 ..     153     214 .. 0.96

  Alignments for each domain:
  == domain 1  score: 60.2 bits;  conditional E-value: 2.6e-20
      CTK3_C   1 skkqilkRiEeDRErhKRlrEniWvvprskekslateaEfenlWeetsdlneddeeealeeleelnea 68 
                 s+ +ilkR+EeDRErhK +rEniW++p+++        E e +W+++++++e d e+  +++e++ne+
  EPX70937.1 153 SRADILKRLEEDRERHKLMRENIWAIPKPE-------LEHEIAWNTIEPITECDLEALNDDFEKFNEC 213
                 6789*************************5.......9***************************997 PP

>> Ribosomal_L30  Ribosomal protein L30p/L7e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1      0.55   3.3e+03      41      51 .]      86      96 ..      82      96 .. 0.76
   2 ?   10.3   0.0   8.5e-05      0.51      13      31 ..     106     125 ..     102     130 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.55
                   HHHHHHCCCGE CS
  Ribosomal_L30 41 rGmLkkVkhlV 51
                   r +Lk+V++ V
     EPX70937.1 86 RDILKLVEYVV 96
                   66899999876 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 8.5e-05
                    -HHHHHHHHHTT-SSTT.EE CS
  Ribosomal_L30  13 ppkvrktLqlLgLrkin.gt 31 
                     p vrk+L++L+L+ i  ++
     EPX70937.1 106 APEVRKVLHSLRLKNIIdDV 125
                    699***********986565 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       515  (0.0287244); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.46
# Mc/sec: 1442.68
//
Query:       EPX70938.1  [L=389]
Description: nuclear pore complex associated protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      5e-18   65.3   0.2      5e-18   65.3   0.2    2.4  2  Nro1      Nuclear pore complex subunit Nro1


Domain annotation for each model (and alignments):
>> Nro1  Nuclear pore complex subunit Nro1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.3   0.2   2.8e-22     5e-18       2     166 ..       3     180 ..       1     214 [. 0.72
   2 ?    0.4   0.3     0.014   2.5e+02     365     406 ..     288     326 ..     276     329 .. 0.83

  Alignments for each domain:
  == domain 1  score: 65.3 bits;  conditional E-value: 2.8e-22
        Nro1   2 akRaLGlgkaakekkqkkeeseeeekestpeaanqltveldeevd..........addelaqLkaLwktylks....dkd.nelvlnGivHECDRllRe 85 
                  kR+ Gl  aa +kkq+ e++ +e++++   a++q + ++++++            +d++ qL +L++   +     d + +  ++ G +HE DR+lR+
  EPX70938.1   3 GKRPQGLRAAASQKKQQLEKQRQEAAANGIDASEQGNGDVNKGEGdedetmlvytEEDNIDQLWGLYEMSREKleggDIEgSINLVFGTIHEADRILRN 101
                 49****************977777777766678887777765443001112222235677788888765443211113331335778***********4 PP

        Nro1  86 seeeekkkeLsdeFhaiYAlALseLa.ifkaeeeekkkkkkvkefFdaAlervdlGlskfpdsellklakakillqripLqy 166
                 +e   + + L+++Fha Y +AL  ++ ++++++   k++++ ++f daAler++lGl+++ d+++l+la  +  l+++ +  
  EPX70938.1 102 TE---DYSGLPKDFHAAYSMALLAVSeLYEPAKGRLKETNDEESFIDAALERAQLGLEASGDQSRLNLAFGRAYLEKVRITL 180
                 43...3457***********99776536888888888999999*******************************99987654 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.014
        Nro1 365 vAEalisLGnlydveskeqEelYkeAEeilkkAnkatnGkye 406
                  AE +i+   l+dv+ ++ E++ k+A e l++   a n  ye
  EPX70938.1 288 FAEYYID---LMDVDEENAEKWAKKASEWLSHSVDAWNALYE 326
                 5777777...5899999*************999888777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (389 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       861  (0.0480228); expected 358.6 (0.02)
Passed bias filter:                      545  (0.0303977); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.28s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 2691.76
//
Query:       EPX70939.1  [L=359]
Description: uroporphyrinogen decarboxylase Hem12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   5.1e-137  456.6   0.0   5.8e-137  456.5   0.0    1.0  1  URO-D     Uroporphyrinogen decarboxylase (URO-D)


Domain annotation for each model (and alignments):
>> URO-D  Uroporphyrinogen decarboxylase (URO-D)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  456.5   0.0  3.2e-141  5.8e-137       1     346 []       5     355 ..       5     355 .. 0.98

  Alignments for each domain:
  == domain 1  score: 456.5 bits;  conditional E-value: 3.2e-141
                 ----HHHHHHTT---SS--B--TT-SSTTSHHHHHHHTSSSHHHHHH-HHHHHHHHHHHHHHH-..-S-EE-S--TTGGGGGGT-EEEEETTTEEEEE- CS
       URO-D   1 tknerllralrgekvdrvPvwlmRqaGrylpeyraeragvsflelcknpelaaevtlqpvrrfg..lDaailfsdilveaealGlevefeegegPvvek 97 
                 +kn+++lra+rge+v+r+Pvw+mRqaGrylpey+++r++  f+e+c++pe  +e+tlqp++rf+  lDaai+fsdilv+++alG++v + e++gP++++
  EPX70939.1   5 MKNDLILRAARGETVERPPVWIMRQAGRYLPEYHRVRSKQGFFEMCQTPETSCELTLQPINRFDglLDAAIIFSDILVIPQALGMQVVMLEQKGPHFPE 103
                 58************************************************************************************************* PP

                 -S-....GGGS----GGG.G..HHHHHHHHHHHHH.--SS-EEEEEE-HHHHHHHHHCTT.-SS-HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH CS
       URO-D  98 pvrtaedveklevpddveegrlpyvleaikllkkelggevpligfvgaPftlasylveGg.skgfekllkllykdpeevhklldkltdvvieylkaqie 195
                 p+ t+ed+ekle+  ++   +l+yv++ai+l+++ l+g+vpl+gf+gaP+t+ +y++eGg sk+f+k++++l+++pe+ h+ll+++t+++i yl +q+ 
  EPX70939.1 104 PLATPEDLEKLEKVPNIP-AKLGYVMDAISLTRENLDGRVPLLGFSGAPWTIVAYMIEGGgSKTFTKAKSWLFRYPEASHRLLNMVTEATIVYLTQQVY 201
                 ***********9887764.68****************************************************************************** PP

                 TT-SEEEEEETTGGGS-HHHHHHHTHHHHHHHHHHHHH.H-....-S-EEEEESSHH.HHHHHHTTS--SEEE--TTS-HHHHHHSS.....EEE--B- CS
       URO-D 196 agAdaiqifDswagllspedfeefvlpylkrivdevkaegp....kvpvilfikgagaeiledlaelgadvlsldwtvdlkeaarevg.dkvalqGnld 289
                 agA+++qifDswag lsp+df ef++pyl ri+++vk+e +     vp+i+f+kga+ + l++l+++g+dv++ldwtvd+kea+r  g ++v+ qGnld
  EPX70939.1 202 AGAQMLQIFDSWAGELSPKDFFEFSYPYLVRICEGVKKELSkskrAVPMIVFPKGAW-YALDKLCDSGYDVIGLDWTVDPKEAVRIRGdRRVTFQGNLD 299
                 ***************************************999999************.9**************************999899******** PP

                 G.GGGGS-HHHHHHHHHHHHT.T---SSSEEB-BSS---TTS-HHHHHHHHHHHHT- CS
       URO-D 290 PialLlgspeeiekevkeilekgaggkkgyilnlGhgippetppenvkalveavkey 346
                 P  +L+g++e ie+++ke++e+ +ggk+gyi+nlGhg++p+++p+ v+ ++e +++y
  EPX70939.1 300 P-NILYGGREIIEARTKEMIEGFNGGKQGYIINLGHGVTPGVNPDDVRFFLEQCHKY 355
                 *.8******************999*******************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (359 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       265  (0.0147805); expected 358.6 (0.02)
Passed bias filter:                      265  (0.0147805); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 2515.36
//
Query:       EPX70940.1  [L=1325]
Description: lysophospholipase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.1e-27   95.0   0.0    2.6e-14   53.0   0.0    4.1  4  cNMP_binding  Cyclic nucleotide-binding domain
      1e-17   65.0   6.2    1.2e-16   61.5   6.2    2.4  1  Patatin       Patatin-like phospholipase


Domain annotation for each model (and alignments):
>> cNMP_binding  Cyclic nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.27   2.4e+03      15      34 ..     162     181 ..     160     189 .. 0.81
   2 ?    2.4   0.0     0.019   1.7e+02      66      88 ..     275     297 ..     264     298 .. 0.83
   3 !   34.2   0.0   2.3e-12     2e-08       3      88 ..     544     636 ..     542     637 .. 0.90
   4 !   53.0   0.0   2.9e-18   2.6e-14       3      85 ..     667     750 ..     665     754 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.27
                   SB-SEEEEEEES-EEEEEEE CS
  cNMP_binding  15 dpadslyivlsGevrvyrls 34 
                   d+  s+ +v+ G ++vy+ +
    EPX70940.1 162 DEQSSFILVVDGCFQVYTAA 181
                   566799**********9554 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.019
                   EEESSTEEEEEEEHHHHHHHHHH CS
  cNMP_binding  66 vvAltdsellalprddflellqq 88 
                   + A+ d++++++p ++f+ l+++
    EPX70940.1 275 AKAKCDTTIAVIPGSAFHHLVRK 297
                   778899*************9976 PP

  == domain 3  score: 34.2 bits;  conditional E-value: 2.3e-12
                   EE-TT-EEE-TTSB-SEEEEEEES-EEEE......EEETTS.EEEEE.EE-TTEEESHHHHHHTS--SSEEEESSTEEEEEEEHHHHHHHHHH CS
  cNMP_binding   3 sfkagevifrqGdpadslyivlsGevrvy......rlsedgkevvla.vlgpGdlfGelalltgeprtatvvAltdsellalprddflellqq 88 
                    +k+ +vi+rqGd+ad++++++ G +  +       + ++g++      ++pG l+   a++ + ++  +v+A+td+ +  lpr +++++ +q
    EPX70940.1 544 FYKKETVIVRQGDHADGVFYIIDGFLDATcpskiaIYGNQGQTEEHCfMIKPGGLVNYQACVSNYRSFVNVTARTDVLVGYLPRTALERITEQ 636
                   69***********************8887788777788899888888455************999***********************99887 PP

  == domain 4  score: 53.0 bits;  conditional E-value: 2.9e-18
                   EE-TT-EEE-TTSB-SEEEEEEES-EEEEEEETTS.E..EEEEEE-TTEEESHHHHHHTS--SSEEEESSTEEEEEEEHHHHHHH CS
  cNMP_binding   3 sfkagevifrqGdpadslyivlsGevrvyrlsedgke..vvlavlgpGdlfGelalltgeprtatvvAltdsellalprddflel 85 
                   ++ +++v+f +Gdp ds+yiv+ G++r    ++d k+    ++++g+Gd  Gel++l ++pr+ t+ A+ dsel+++p+  f++l
    EPX70940.1 667 HLNPDQVLFNKGDPSDSIYIVQNGRLRSI-DDSDSKSnsDYFDEYGKGDSAGELEMLIDAPRSSTLFAIRDSELAKIPQTLFNAL 750
                   7889************************7.4444433125999**************88********************999887 PP

>> Patatin  Patatin-like phospholipase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.5   6.2   1.4e-20   1.2e-16       1     200 [.    1017    1178 ..    1017    1181 .. 0.89

  Alignments for each domain:
  == domain 1  score: 61.5 bits;  conditional E-value: 1.4e-20
     Patatin    1 LvlsGGGsrgafslgalkaLkkelgerfdiisGtSaGAiialllalgrdpaalvddlrnlllnkifdrdllirelaanlaarlsgllgkgglfdaea 97  
                  Lvl+GGG+rg++++gal aL +e+g+ fdii+GtS+GA+++ l+a +       d +  + ++k f        +a+ + + l+ ++   ++ +++ 
  EPX70940.1 1017 LVLGGGGARGISQIGALYAL-EEAGIPFDIIGGTSIGAFNGGLYAREA------DLVPMFGRAKKFCGR-----MANLWRFVLDLTYPQAAYTTGHE 1101
                  8*******************.********************7777764......444455555555555.....5666669999************* PP

     Patatin   98 lrellrkvladktlkrlsarlgklpllkslftanqavpaittataatastanranglytedddddvdladavraSsafPglfppvsldge.lyvDGG 193 
                  + + + k++++  ++++  ++                              +++   +++d    +  ++ +raS+++ gl pp+  d    ++DGG
  EPX70940.1 1102 FNRGIWKTFGESHIEDFWLPFYVN---------------------------TTNITHSRMDVHSSGYAWRYIRASMSLAGLVPPMLSDNGdMLLDGG 1171
                  *****************9999888...........................99*****************************99999766699**** PP

     Patatin  194 ilsNvPi 200 
                    +N+ +
  EPX70940.1 1172 YMDNLTV 1178
                  ****865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1325 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       698  (0.0389313); expected 358.6 (0.02)
Passed bias filter:                      487  (0.0271627); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.87u 0.30s 00:00:01.17 Elapsed: 00:00:00.48
# Mc/sec: 8243.35
//
Query:       EPX70941.1  [L=696]
Description: morphology protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-33  115.2   0.0    4.5e-33  114.4   0.0    1.4  1  DUF21     Cyclin M transmembrane N-terminal domain


Domain annotation for each model (and alignments):
>> DUF21  Cyclin M transmembrane N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.4   0.0   2.5e-37   4.5e-33       1     170 [.      65     231 ..      65     239 .. 0.93

  Alignments for each domain:
  == domain 1  score: 114.4 bits;  conditional E-value: 2.5e-37
       DUF21   1 liivlllllsaffsgaEtAlvslsrlrleelaekgk....kkakrllkllknp.erlLstlligntlvnillsalatalfvellaegalavviatviv. 93 
                 li  +l+ll ++f+g++++l+  +++ l+ l ++g+    k+a+++l+ll++  +++L+tll+gn +vn  l+++++++++  +         a v++ 
  EPX70941.1  65 LISAFLVLLGGVFAGLTIGLMGCDEVYLQVLEQSGDeyerKHANKVLRLLNRGkHWVLVTLLLGNVIVNETLPIVFDSIIGGGWP--------A-VLIs 154
                 67899***********************88888888777799999*******99*************************999884........3.6666 PP

       DUF21  94 tllilvfgEilPkslalkyaekialalapplrvlmvllyPlvwllskllnlilesesepavseeelkklveeseeeg 170
                 t +i++fgE++P++l+++y ++i ++l p++ + m+ll+P++++  +ll+++l++++++ ++++ lk+lv+++++ g
  EPX70941.1 155 TAAIVIFGEVIPQALCVRYGLSIGAKLEPLVLFMMYLLMPIAYPTALLLDACLGEDHGTMYRKAGLKTLVTLHRDLG 231
                 *************************************************************************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (696 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1105  (0.061632); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.29s 00:00:00.94 Elapsed: 00:00:00.45
# Mc/sec: 4628.09
//
Query:       EPX70942.1  [L=129]
Description: transporter Got1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.1e-15   56.6  12.5    3.5e-15   56.4  12.5    1.1  1  Got1       Got1/Sft2-like family
  ------ inclusion threshold ------
        8.1    6.2   5.8         14    5.3   5.8    1.6  1  Neurensin  Neurensin


Domain annotation for each model (and alignments):
>> Got1  Got1/Sft2-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.4  12.5   3.9e-19   3.5e-15       5     112 ..      18     112 ..      10     113 .. 0.93

  Alignments for each domain:
  == domain 1  score: 56.4 bits;  conditional E-value: 3.9e-19
        Got1   5 fllsllglpllflkprkFallytlGnilflastafLiGpkkqlkkmfskerliativyllsllltLyaalvlkstlltllfvivqllallwyllsyiPg 103
                 +l+++lg+++lf+     + l++lGnil+++++++++Gp k  +++++k+r+++ti +++++llt++ +++       +l++++++l++++++  + P+
  EPX70942.1  18 LLFMILGVIMLFD-----GPLLSLGNILSVSGVFMIVGPAKSANFFLRKDRMVGTISFISGFLLTIL-RFP-------ILGFFLECLGFFNLFRVFYPI 103
                 455699*******.....67***********************************************.***.......********************* PP

        Got1 104 grsalkkvl 112
                 + s+l++++
  EPX70942.1 104 IISFLRSLP 112
                 *****9875 PP

>> Neurensin  Neurensin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   5.8    0.0016        14      38     110 ..       4      77 ..       1     105 [. 0.79

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0016
   Neurensin  38 sllwkv...slvvgtlvlllGvtallvGylvprrlelvksegelvvvDkqaiefnnaLdtlklaGavllclGglll 110
                 s++ k+    +++g+l+++lGv++l  G l++    l    + ++++   a + n  L+  +++G++ +  G ll 
  EPX70942.1   4 SEVQKIgigITSLGLLFMILGVIMLFDGPLLSLGNILS--VSGVFMIVGPAKSANFFLRKDRMVGTISFISGFLLT 77 
                 5666666667899************9999988754443..577777778888889999999999998776665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       565  (0.0315132); expected 358.6 (0.02)
Passed bias filter:                      292  (0.0162865); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1011.13
//
Query:       EPX70943.1  [L=298]
Description: thiosulfate sulfurtransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      1e-24   87.1   0.0    2.8e-12   47.1   0.0    2.1  2  Rhodanese  Rhodanese-like domain


Domain annotation for each model (and alignments):
>> Rhodanese  Rhodanese-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.1   0.0     1e-13   1.8e-09       9     107 .]      25     135 ..      14     135 .. 0.86
   2 !   47.1   0.0   1.5e-16   2.8e-12       9     104 ..     176     283 ..     165     286 .. 0.81

  Alignments for each domain:
  == domain 1  score: 38.1 bits;  conditional E-value: 1e-13
   Rhodanese   9 lekgkvallDvR.........ppeeYekghIpgAvnv...skdtlsrakkseapllelpeellel.gidnkktvvvycdgggr.aaaaaallkklGykn 93 
                   +++ +llD+           ++e+++ ++pgA  +   +++  ++a +++ p +e ++ +    gid+++ v+vy+++g   + ++++++k  G+kn
  EPX70943.1  25 A-QKS-VLLDATwylpteskdGRQEFSQNRLPGAQYFgidEAKDHRNALPHMLPPAEEFATYVGNlGIDRNTNVIVYDRKGFFsSPRVYWTFKVFGHKN 121
                 2.222.3999999987766666667**************9999999999**********************************99999********888 PP

   Rhodanese  94 vsvldGGfkawkea 107
                 v++  + f +wk+a
  EPX70943.1 122 VFLFPNAFAEWKAA 135
                 ***********985 PP

  == domain 2  score: 47.1 bits;  conditional E-value: 1.5e-16
   Rhodanese   9 lekgkvallDvRppeeY...........ekghIpgAvnvskdtlsrakkseapllelpeellel..gidnkktvvvycdgggraaaaaallkklGyknv 94 
                   + +++++D+Rp++++           + ghIp ++n++++ l ++  +e +  e +e++ ++    d+ +++++ c +g  a+ +  +l+  G+++v
  EPX70943.1 176 S-SSNTRIIDARPQPRFtgaaaeirpgiASGHIPTSINIPFTDLVKPGITEPKPVEELEKIFAEhgLHDKSTPIITSCGSGVTASVLFVALELCGFTDV 273
                 3.34456**********9999999999888*********777777777777777777777777777789999******999995555667778**999* PP

   Rhodanese  95 svldGGfkaw 104
                 +v+d +++++
  EPX70943.1 274 RVYDESWTGY 283
                 *******998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (298 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       352  (0.019633); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 2147.46
//
Query:       EPX70944.1  [L=717]
Description: THO complex subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-84  284.8   0.1    1.2e-84  284.8   0.1    1.9  2  efThoc1          THO complex subunit 1 transcription elongati
  ------ inclusion threshold ------
      0.081   12.9   0.2         14    5.7   0.0    2.7  2  Phage_sheath_1C  Phage tail sheath C-terminal domain


Domain annotation for each model (and alignments):
>> efThoc1  THO complex subunit 1 transcription elongation factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  284.8   0.1   1.3e-88   1.2e-84       3     471 ..      83     542 ..      81     559 .. 0.87
   2 ?  -10.8   9.8         2   1.8e+04     398     398 ..     649     649 ..     573     708 .. 0.53

  Alignments for each domain:
  == domain 1  score: 284.8 bits;  conditional E-value: 1.3e-88
     efThoc1   3 alLdlcvhlse..nelleatlpfeLledlldlltvdgcrkffdYlesriewfkekgfsykapklelLrscNelLrrlsrpedtvfcgriliFLSklfPl 99 
                  +Ldl+v l+e   + ++a  pf ++e+l+d++++ +crk+++Y+e+r   +   +   ++ + +lLr+ NelLrrls + d  +cgri+i LSk+f+ 
  EPX70944.1  83 LILDLLVVLNEidASYCDAVFPFLIIEELMDIHSLMECRKLYEYFETRSVLLDGLVS-NRGRGPVLLRISNELLRRLSGQVDPALCGRIHILLSKAFAP 180
                 589******777799*************************************99888.***************************************** PP

     efThoc1 100 sekSglNlrgefnlenvtefeees......eeekeeeeakkkkiddnlYkkfWslqkffrnPlqllnsp.kfktfekslesvldaflsleeefyreski 191
                 +e+Sg N+rg++nlen  +  + s      +   e +ea+   +  +lY+ fW+lq+++ +P+++++ +  +++f +s++ +l++f+ +++++   +  
  EPX70944.1 181 EERSGSNIRGDYNLENPVVTTKISspnipvS---EGNEASYSRKVHDLYQVFWELQDLLVQPPKIAQDAgSMQKFLNSTNVILESFEAIQKNTFFIE-- 274
                 ****************988667768886552...444444566899*******************************************99988773.. PP

     efThoc1 192 kkkkkkrralkeklnknskaieekkqeswkefsessfnakyltspkllelqlsDsnFRrqvLlQllilfqfllsltesk.eiknf..akvkkksetqvL 287
                  + k + + ++++l         +k+     +++ +  ++y+ s  l+++ql D++FR q++lQ++ l++fll ++++  + +++   ++k  ++++ L
  EPX70944.1 275 -NPKPTINPTSSAL-------LPEKYT----VINDNICPNYIRSLPLFDFQLIDETFRLQFMLQVIVLCDFLLDFSKKRlDLRRTrpFTNKAVTPNTSL 361
                 .3333333333333.......335555....5888899***********************************9988832333335556666666699* PP

     efThoc1 288 sdedakwiketekkvyellkefyppkgkkFseivehllsreenwvkwKnegcpefekpavseeelseapekaekfkkkrlrgfikmGnkeltrlwki.. 384
                 sded+k ++ + +++y llke    k+  + e+v ++++ e+nw +wK  gc +fekp +++  l+ea +  +k++ ++++ ++ mGn+ lt++w+   
  EPX70944.1 362 SDEDEKNVSAILNRIYALLKE---IKNGDYVETVTSVMNVENNWKNWKGFGCLSFEKPLLDKSVLDEAVAGLKKVASTPPKIRYAMGNAPLTKIWQNag 457
                 *********************...5566699******************************************************************** PP

     efThoc1 385 etglealkkkerntlpslesylekikleekdeeaekeee..eeaeekkivkqWraLRllrrqslfeFdkvdektglkglfdeleseekk 471
                 e+ le+lkk+er+ +p+++s+l ++k+++ + e+ ++e+  e+  ++k++k+W a+R++ +++l  F+     tgl +l+  +++ e +
  EPX70944.1 458 ENSLEDLKKEERYKIPTPQSFLPGVKRDSDEMEESVKEDeqEYYRQAKASKTWLAFRSAINSHLEAFE----YTGLGDLELLTQAIEGN 542
                 *************************98877777777777899*************************9....77888887666665555 PP

  == domain 2  score: -10.8 bits;  conditional E-value: 2
     efThoc1 398 t 398
                  
  EPX70944.1 649 L 649
                 0 PP

>> Phage_sheath_1C  Phage tail sheath C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.1    0.0046        41      36      73 ..     364     401 ..     348     411 .. 0.85
   2 ?    5.7   0.0    0.0016        14      15      57 ..     486     526 ..     482     544 .. 0.87

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.0046
                      TSHHHHHHHHHHHHHHHHHHHHTTSB-S--STTSEEEE CS
  Phage_sheath_1C  36 nnddgralvksalnaylkelqregaienfdnksdleve 73 
                       ++ +++++++ + a+lke+++ +++e +++  ++e++
       EPX70944.1 364 EDEKNVSAILNRIYALLKEIKNGDYVETVTSVMNVENN 401
                      4679***********************99987777766 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0016
                      HHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHH CS
  Phage_sheath_1C  15 ldllrddirstfkkkylgkklnnddgralvksalnaylkelqr 57 
                       d +++++++  +++y+++  +++ ++ +++sa+n++l+  + 
       EPX70944.1 486 SDEMEESVKED-EQEYYRQAKASK-TWLAFRSAINSHLEAFEY 526
                      58899999999.666999999999.*************98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (717 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1151  (0.0641977); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.70u 0.29s 00:00:00.99 Elapsed: 00:00:00.46
# Mc/sec: 4725.35
//
Query:       EPX70945.1  [L=989]
Description: SNF2 family helicase Rhp26 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.6e-69  232.1   0.0    1.3e-68  231.3   0.0    1.4  1  SNF2_N        SNF2 family N-terminal domain
    3.6e-18   65.9   0.0    9.4e-18   64.6   0.0    1.8  1  Helicase_C    Helicase conserved C-terminal domain
    1.9e-08   34.5   0.0    1.1e-07   32.0   0.0    2.4  2  ResIII        Type III restriction enzyme, res subunit
  ------ inclusion threshold ------
       0.25   11.6  14.6      0.073   13.3   1.9    3.6  3  Seryl_tRNA_N  Seryl-tRNA synthetase N-terminal domain


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  231.3   0.0   2.9e-72   1.3e-68      40     350 .]     294     615 ..     223     615 .. 0.90

  Alignments for each domain:
  == domain 1  score: 231.3 bits;  conditional E-value: 2.9e-72
                 .........HHHHHTT--EEE---TTS--HHHHHHHHH...HHTTTS---.......S-EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH.... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.... RF
      SNF2_N  40 atgevveesaeakqsvrGGiLaDemGLGKTvqvlalilaqrakeekdkekkrkdtlagptLivvPaslldqWeneierhvsssalrvlvyggqkk.... 134
                 ++ ++v+  +e++++  GGi+ DemGLGKT+q++++i    + ++++         ++p+Liv+Pa+l++qW+ne+++++ + ++ vl+ +g+      
  EPX70945.1 294 YQVTCVQWLWELYSQEAGGIIGDEMGLGKTIQIVSFIS---SLHHSRM-------YEKPALIVCPATLMKQWVNEFHQWWGPLRVVVLHATGSGAvatr 382
                 455677888999**************************...5555555.......459******************************99998889*** PP

                 .........................-----------------EEEE-HHHHHHHT......TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-E CS
                 .........................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 135 .........................mkkkntkvapklladydvvittYdvlsreaelqkkrsvlkqvewkrvvlDEghtlknstskaaeavskLstsnr 208
                                           ++  + + + ++++ +v+ittY  l+  +      + l  +ew + vlDEgh+++n +s+++  +++ +t +r
  EPX70945.1 383 ekrqyqsleeednaedvinpnasksFHSYAKALVDSVFTKGHVLITTYAGLRLYS------DLLLPREWGYCVLDEGHKIRNPDSEMSVNCKQVKTPHR 475
                 **********************999556667899******************888......9************************************* PP

                 EEE-S--SSS-HHHHHHHHHHH-TTTT--HHHHHHHTHHHHH............HHHHHHHHHHHTT-STTEE---GGGT--S---EEEEEEEEE--HH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 209 wiltGTPiqnsledlygLlkfLreepfgekqtfdkllqrpie............aqaekgrsrLlqllqrlmlrrakkdveknlPpkteeiiflklskv 295
                 +il+GTPiqn+l++l+ L++f+ ++ +g+  +f++++  pi+            ++a+k++  L++l+++++lrr+k dv  +lP+k+e+++f+kl++ 
  EPX70945.1 476 IILSGTPIQNNLIELWNLFDFVFPGRLGTLPVFQNQFALPINiggyanasnvqvQTAYKCACMLRDLISPYLLRRMKLDVASDLPKKSEQVLFCKLTPL 574
                 *************************************************************************************************** PP

                 HHHHHH....................HHHHHH-HHH-HHHHHHHHHHHHH---XX CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 296 erksYnrllevlrkkalakllkrseaalkssskskekilelllelrqacnhpqlv 350
                 +rk+Y+   ++l +  ++k+l+      k       ++l+ +  lr++cnhp+lv
  EPX70945.1 575 QRKAYQ---DFLNGSDMQKILNG-----K------RQMLYGIDILRKICNHPDLV 615
                 ******...44444444444444.....3......3479*************986 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.6   0.0   2.1e-21   9.4e-18       2     111 .]     636     749 ..     635     749 .. 0.89

  Alignments for each domain:
  == domain 1  score: 64.6 bits;  conditional E-value: 2.1e-21
                 HHHHHHHHH.HHTTTTSEEEEEESSHHHHHH.HHHHHHHT..TSTEEEESTTSTHHHHHHHHHHHH.TTSSS.EEEESGGGTSSSTSTTESEEEESSSS CS
  Helicase_C   2 kleallell.kleeeggkilifvntidrlek.vklllekk..gikvavlhgelpqnereeileqfn.kgesd.vLiatdvaerGidipkvnlVinfdlp 94 
                 kl+ ++ ll   +++++++l+f++t+++l+   + ++     g+++++++g ++   r   +++fn +g +d +L++t+v++ Gi++++++ Vi fd++
  EPX70945.1 636 KLKVVISLLkLWKKQKHRTLLFSQTRQMLDIlETSIK--DipGLRYCRMDGGTSIGLRHGLVDNFNkNGIYDvFLLTTRVGGLGINLTGADRVILFDPD 732
                 5667777775568999*************76544444..256************************7899***************************** PP

                 SSHHHHHHHHTTSSSTT CS
  Helicase_C  95 rnvtsyiqriGRtgRag 111
                 +n+++  q++ R++R g
  EPX70945.1 733 WNPSTDAQARERAWRLG 749
                 ***************86 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.0   0.0   2.5e-11   1.1e-07       4     170 ..     291     483 ..     288     484 .. 0.76
   2 ?   -3.2   0.0       1.6   7.1e+03      35      65 ..     634     662 ..     570     673 .. 0.64

  Alignments for each domain:
  == domain 1  score: 32.0 bits;  conditional E-value: 2.5e-11
                 E-HHHHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSHHHHHHHHHHG.........................GGG CS
      ResIII   4 lreyQeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkeekflflvprkslleqtleef.........................kkf 77 
                 l  yQ ++++ l e +   ++  g+i  + G GKT+ ++++i +l++++ +ek  ++v   +l++q+ +ef                         +++
  EPX70945.1 291 LFRYQVTCVQWLWELY--SQEAGGIIGDEMGLGKTIQIVSFISSLHHSRMYEKPALIVCPATLMKQWVNEFhqwwgplrvvvlhatgsgavatrekRQY 387
                 6789999999888777..5999***************************9998888888899*********8888888888888888888776665222 PP

                 TGG.....GEEEESSS-B--...............-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS.TTTHHH.HHT---SEEEEEE CS
      ResIII  78 lseayke.igkkvsgdkkka........kekdstnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgakkswrei.lekfkeavllglT 166
                 +s + ++ ++ +++ +  k+          +  t+ ++l+tt+  l   s       + ll+ +  + + DE H+++  +s  ++  +++k   ++ l+
  EPX70945.1 388 QSLEEEDnAEDVINPNASKSfhsyakalVDSVFTKGHVLITTYAGLRLYS-------DLLLPREWGYCVLDEGHKIRNPDSEMSVnCKQVKTPHRIILS 479
                 22222223333344443333655555555666778888888888777666.......8899999**************8655555467779999999** PP

                 SS-S CS
      ResIII 167 ATpe 170
                 +Tp 
  EPX70945.1 480 GTPI 483
                 **95 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.6
                 STHHHHHHHHHHHH-S.....-EEEEESSHH CS
      ResIII  35 tGKTlvaaklierllkkgkeekflflvprks 65 
                 +GK  v ++l +  +k+++  ++l++ ++++
  EPX70945.1 634 SGKLKVVISLLKLWKKQKH--RTLLFSQTRQ 662
                 4555566666555555544..5666555555 PP

>> Seryl_tRNA_N  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.9    0.0071        32      66     104 ..      34      72 ..      21      75 .. 0.87
   2 ?   -1.4   0.1       0.6   2.7e+03       7      55 ..      78      99 ..      76     106 .. 0.52
   3 ?   13.3   1.9   1.6e-05     0.073      31      71 ..     222     264 ..     208     269 .. 0.87

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0071
                   TS-TCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCTS CS
  Seryl_tRNA_N  66 kedaeeliaevkelkeelkaleaelkeleaeleklllai 104
                   +e +e  +++ +++ +e+ a+e++ ++le+++++ l++i
    EPX70945.1  34 GETREIERKRLEKVRKEIHAVEQKSRQLENRIDSRLTQI 72 
                   57778889999*********************9999887 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.6
                  HHH-HHHHHHHHCCCTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Seryl_tRNA_N  7 irenpeavkeklkkRgedkadvdelleldekrrelqveleelqaerNel 55
                  +r+++++++                             l++l++  N +
    EPX70945.1 78 LRKQLDKFRST---------------------------LQNLKSDENDI 99
                  34444444444...........................44444444443 PP

  == domain 3  score: 13.3 bits;  conditional E-value: 1.6e-05
                   HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCTT..S-TCC CS
  Seryl_tRNA_N  31 lleldekrrelqveleelqaerNelskeIgkakkkk..edaee 71 
                   l +  ++r +l++++e+ ++e+Ne+s e+g+a+++   ed+ee
    EPX70945.1 222 LHSWCTERSQLRQKTEKRKQEKNEASSEMGSAIQSSliEDTEE 264
                   5566689**************************9987777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (989 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1454  (0.0810977); expected 358.6 (0.02)
Passed bias filter:                      541  (0.0301746); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.82u 0.34s 00:00:01.15 Elapsed: 00:00:00.51
# Mc/sec: 5815.54
//
Query:       EPX70946.1  [L=80]
Description: respiratory chain complex assembly protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-06   28.3   7.2    2.1e-06   27.7   7.2    1.3  1  CHCH      CHCH domain
    0.00072   19.5   1.8     0.0074   16.3   0.4    2.2  2  CX9C      CHCH-CHCH-like Cx9C, IMS import disulfide relay-sys


Domain annotation for each model (and alignments):
>> CHCH  CHCH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   7.2   2.4e-10   2.1e-06       1      34 [.      29      61 ..      29      62 .. 0.96

  Alignments for each domain:
  == domain 1  score: 27.7 bits;  conditional E-value: 2.4e-10
                THHHHHHHHHHHHHCTSSTTTTHHHHHHHHHHHC CS
        CHCH  1 CgeefkeylkClkdnsdefskCrkefeafkeCvk 34
                C ee+  + +C++d+ d ++kC+ke+e+f++C++
  EPX70946.1 29 CVEEHMRLNDCYWDKHD-WRKCSKEMEEFRKCWE 61
                9999999**********.**************97 PP

>> CX9C  CHCH-CHCH-like Cx9C, IMS import disulfide relay-system,
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0     0.016   1.4e+02      28      39 ..      28      39 ..      21      43 .. 0.84
   2 !   16.3   0.4   8.2e-07    0.0074       6      29 ..      47      70 ..      46      76 .. 0.85

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.016
        CX9C 28 kCkeqkkeLakC 39
                 C e+ + L+ C
  EPX70946.1 28 GCVEEHMRLNDC 39
                699999999999 PP

  == domain 2  score: 16.3 bits;  conditional E-value: 8.2e-07
        CX9C  6 kyCpkefeaYhkCvssnqswpekC 29
                ++C ke+e++ kC +s++   ++C
  EPX70946.1 47 RKCSKEMEEFRKCWESKHGPLTSC 70
                89***********99987666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       672  (0.0374812); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.31s 00:00:00.72 Elapsed: 00:00:00.49
# Mc/sec: 493.44
//
Query:       EPX70947.1  [L=355]
Description: RNA-binding protein Cwf5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.5e-05   24.0   0.0    4.4e-05   23.2   0.0    1.4  1  RRM_1         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
    0.00026   20.9   0.0    0.00049   20.1   0.0    1.4  1  Nup35_RRM_2   Nup53/35/40-type RNA recognition motif
     0.0011   18.7   0.0     0.0023   17.8   0.0    1.4  1  RRM_occluded  Occluded RNA-recognition motif


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.0   7.3e-09   4.4e-05       1      61 [.     214     269 ..     214     280 .. 0.87

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 7.3e-09
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTT CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealng 61 
                 lf+ ++  ++ + +++++F++fGp ks+  ++       ++afV+++s+ +Ae A +++ +
  EPX70947.1 214 LFIMGVEDELPDYKIRKHFEQFGPLKSVVCSH-----RAKCAFVNYKSRLSAEIAAASCPN 269
                 67778888888899***********9999999.....5***************99998876 PP

>> Nup35_RRM_2  Nup53/35/40-type RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   8.1e-08   0.00049       6      52 ..     216     263 ..     213     264 .. 0.91

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 8.1e-08
  Nup35_RRM_2   6 VsGydteli.elVlehFasfGeIvkhyvpkevsvmyvkfesekdaekA 52 
                  + G++ el  ++++ hF++fG+     ++ +   ++v ++s+ +ae+A
   EPX70947.1 216 IMGVEDELPdYKIRKHFEQFGPLKSVVCSHRAKCAFVNYKSRLSAEIA 263
                  567777777689999*******************************98 PP

>> RRM_occluded  Occluded RNA-recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   3.8e-07    0.0023       4      51 ..     214     260 ..     211     267 .. 0.91

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 3.8e-07
  RRM_occluded   4 isllplsDtvnkariralveekegeikkivLvpdheGAivefkdekia 51 
                   + ++++ D   + +ir+++e+  g++k +v+    ++A+v +k++ +a
    EPX70947.1 214 LFIMGVEDELPDYKIRKHFEQF-GPLKSVVCSHRAKCAFVNYKSRLSA 260
                   679*******************.*******************997665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (355 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       946  (0.0527637); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 2477.77
//
Query:       EPX70948.1  [L=1212]
Description: ski complex RNA helicase Ski2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.8e-48  162.9   0.4    1.2e-47  161.6   0.4    1.8  1  DSHCT           DSHCT (NUC185) domain
    9.2e-34  116.2   0.1    2.1e-33  115.0   0.1    1.6  1  Ski2_N          Ski2 N-terminal region
    2.1e-19   70.5   0.1    6.9e-19   68.8   0.0    2.0  2  rRNA_proc-arch  rRNA-processing arch domain
    4.4e-19   68.9   0.2    1.3e-18   67.4   0.0    1.9  2  DEAD            DEAD/DEAH box helicase
    4.3e-06   27.0   0.0    4.1e-05   23.9   0.0    2.6  1  Helicase_C      Helicase conserved C-terminal domain
  ------ inclusion threshold ------
      0.016   14.9   2.8       0.48   10.1   0.0    2.4  2  Med4            Vitamin-D-receptor interacting Mediator subun
       0.32   10.8   4.7      0.096   12.5   0.2    2.3  3  Pox_Ag35        Pox virus Ag35 surface protein


Domain annotation for each model (and alignments):
>> DSHCT  DSHCT (NUC185) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  161.6   0.4   4.9e-51   1.2e-47       2     164 .]    1036    1207 ..    1035    1207 .. 0.96

  Alignments for each domain:
  == domain 1  score: 161.6 bits;  conditional E-value: 4.9e-51
       DSHCT    2 ntvtlkGrvaaeirsedeLlltellfsgvlddlepeelaAllsalvfeekredeeekepklseeleealeelkeiaeriakvs.............v 85  
                   tv lkGrva+ei+s +eL+ltel++++ l +++ ee +Allsa+vf+ek++   ++ p++s++l+e  e + ++aer+++++             +
  EPX70948.1 1036 RTVLLKGRVACEINSTSELVLTELILENSLGEFSCEETIALLSAFVFDEKTD---VE-PNISSHLQEGKEMILQVAERVNRIQekhqvlyfnegndF 1128
                  6899*********************************************954...44.88999******9999*******9999************* PP

       DSHCT   86 esrldlglvevvyaWakgasfaellektdldeGdiVRllrrleellrqlakaakvigneeLkkkaeeaielikRdiVfa 164 
                  es++++gl+ev+y+Wa+g+sf+++++ td+ eG+iVR++ rl+e+lr+ + aa+v+g++++++k+ee+++li+R+iVf+
  EPX70948.1 1129 ESQPRFGLMEVCYEWARGMSFNRITDLTDILEGSIVRTIIRLDEVLRECRGAARVVGDASMYSKMEECQNLIRRNIVFC 1207
                  **99*************************************************************************95 PP

>> Ski2_N  Ski2 N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.0   0.1   8.2e-37   2.1e-33       2     130 ..      60     183 ..      59     186 .. 0.91

  Alignments for each domain:
  == domain 1  score: 115.0 bits;  conditional E-value: 8.2e-37
      Ski2_N   2 klqthwdrkkdyksllkippsasrtslefkRkgleGkivgykevslveasnataknSlSlsRkpgpksdfvrGsssnlpFaPGGleee.vlkdsekase 99 
                 klq++w+++ d++ l+  p+s srt+l+f+R+gleG+i++ykev   ++++++aknS+S+ Rkp++ks+fvrGs++n+pF+  + ++  +++       
  EPX70948.1  60 KLQKQWENEVDSSVLFDFPKSISRTNLQFRRQGLEGHIIDYKEV-SEDIADLNAKNSSSFLRKPASKSEFVRGSTNNIPFLTDDPDNPqEIA-----AP 152
                 89******************************************.8999*************************************751444.....34 PP

      Ski2_N 100 seekllhrdekglltippGfsrGldfkedee 130
                 +  ++ +++e+gl ++ppGfsrGl ++++ e
  EPX70948.1 153 KPVQMPLKGEDGLYQVPPGFSRGLVMNKSVE 183
                 45778899*****************998765 PP

>> rRNA_proc-arch  rRNA-processing arch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1         2     5e+03     170     212 ..     572     612 ..     566     620 .. 0.67
   2 !   68.8   0.0   2.7e-22   6.9e-19       1     269 [.     748    1009 ..     748    1010 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 2
                     EEEEE---SSTTSTTHHHHHHHHHHHHHHHSS.---B--TTTTS CS
  rRNA_proc-arch 170 Ssvrlklpkdlrkseareevakavqelkrrfp.giplldpikdm 212
                     S+  l+  ++  kse  + + kav++lk+ +   +p++  +++m
      EPX70948.1 572 SNRDLNNHQE--KSEVHIVIEKAVARLKK-EDrTLPQIGRMREM 612
                     5555553333..46666677799999998.46688988888777 PP

  == domain 2  score: 68.8 bits;  conditional E-value: 2.7e-22
                      HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHTC--TT....HHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHGGG--TTEEEEEEETTTEEE CS
  rRNA_proc-arch    1 EyMlerSFsqfqnqkslpelekklkeleeelksitied....eedieeyyklrqqleelreeirkiltkpknilpfLqpGRlvrvksnddldf 89  
                      E+M++rSFs+++nq+ lp++e+++k  ee+l+ ++ e      + ++e+   ++ ++  +++++  + +   + +++  GRl++ + + d   
      EPX70948.1  748 EDMIKRSFSENANQSLLPQHEAEIKSNEEKLSLLKKELndidIQMMKECIYQSESYKAFTRKLHLKAISTATGRRVFRDGRLIVYQ-QPDSTR 839 
                      9******************************99887734555346****************************************9.555666 PP

                      EEEEEEEEEE-SSST.TB---TCTTEEEEEEEEEEETTS-GGG--TT--S--TT--B...........-TT..S-EEEEEEEEEGGGEEEEEE CS
  rRNA_proc-arch   90 gwGivlnfkkrnknskeeeasdeesyvVdvllvlsenskrkdedgekseesaeelkP...........kagdrekgevevvpvplkcieaiSs 171 
                       +G++l + +r  +              d+ l ++  +++      ++ +++++l P           +     +++ +   v+l+++e++++
      EPX70948.1  840 SIGVLLGTVTR--T-----------TSADCTLEVAYLTPQ------NAMKRPSDLLPftepfigtidaS---LFDSQFKFGLVSLSSVERVCA 910 
                      8******9744..2...........124888888877654......24445566666555666644321...233456*************** PP

                      EEE---SS...TTSTTHHHHHHHHHHHHHHHSS---B--TTTTS----HHHHHHHHHHHHHHHHHHTSGG.GSSSHHHHHHHHHHHHHHHHHH CS
  rRNA_proc-arch  172 vrlklpkd...lrkseareevakavqelkrrfpgiplldpikdmkikdeefkkllkkiealesrlaknpllhspnleelyalyekkvalqeei 261 
                       +l+++      r+  a +++  +++ +k+ f + pl d  +  k+kd +f ++ +k++ +  +l + + l   n+  +yal+ ++ +l+++i
      EPX70948.1  911 TVLRIDCGgirDRRGGAFRRLSDQLASVKG-F-NDPLFDEADWSKVKDFDFCEAQEKRTFVSHKLMSYEPLLQNNFVTQYALCFQEYDLENNI 1001
                      *****9997532244677777777777777.3.89*****9999*****************99987743324689****************** PP

                      HHHHHHHH CS
  rRNA_proc-arch  262 kelkkeis 269 
                      ++l++ is
      EPX70948.1 1002 SNLREFIS 1009
                      ***98776 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.4   0.0   5.1e-22   1.3e-18       3     173 ..     285     431 ..     283     434 .. 0.87
   2 ?   -4.0   0.0       4.3   1.1e+04      46      73 ..     712     739 ..     699     763 .. 0.65

  Alignments for each domain:
  == domain 1  score: 67.4 bits;  conditional E-value: 5.1e-22
                 HHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCSEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   3 iQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvdiv 101
                  Q+ea+ ++  g++v+vaa+T +GKT ++  ++   +    +k+ +ka++ +P ++L +q ++++k+ ++ ++     ++g+v+ + +       + ++
  EPX70948.1 285 FQKEAVYHLEMGDSVFVAAHTSAGKTVVAEYAIA--L---AQKHMTKAIYTSPIKALSNQKFRDFKQKFEDVG----ILTGDVQVNPE-------ASCL 367
                 69**************************999999..5...368899************************644....44666666555.......5556 PP

                 EEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 102 vgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkdv 173
                 ++t++ l ++l +g   +++v+f+V+DE++ + d +++  +++++  l       + + +vi+lSAT+p + 
  EPX70948.1 368 IMTTEILRSMLYRGADLIRDVEFVVFDEVHYVNDLERGVVWEEVIIML-------PPHITVILLSATVP-NT 431
                 99*******998888779******************************.......56677********9.43 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 4.3
                 TS-EEEEEESSHHHHHHHHHHHHHHTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  46 tgpkalivePtreLaeqtlnnlkkfkky 73 
                    + +i+ P+++L+ q   +++ +++ 
  EPX70948.1 712 ASLRHMILGPSTKLISQFRLTYNMVLNL 739
                 5566778888888888866555555554 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.0   1.6e-08   4.1e-05      20     111 .]     587     693 ..     540     693 .. 0.65

  Alignments for each domain:
  == domain 1  score: 23.9 bits;  conditional E-value: 1.6e-08
                 EEEESSHHHHHH.......HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSS.......SS..HHHHHH CS
  Helicase_C  20 lifvntidrlek.......vklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlp.......rn..vtsyiq 102
                 +++ + + rl+k       +  ++e  +   av+hg l    +e +   f++g +++L at   ++G+++p  + V++ +++       r+  + +y q
  EPX70948.1 587 IVIEKAVARLKKedrtlpqIGRMREMLSRGLAVHHGGLLPIVKEIVELLFQRGLVKILYATETFAMGVNMPA-RSVVFSGIQkhdgrsfREllPGEYTQ 684
                 222233335544422222222223333677788888888888888889999********************5.555556666455544322557***** PP

                 HHTTSSSTT CS
  Helicase_C 103 riGRtgRag 111
                  +GR+gR g
  EPX70948.1 685 CSGRAGRRG 693
                 *******75 PP

>> Med4  Vitamin-D-receptor interacting Mediator subunit 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00019      0.48      72     102 ..      58     131 ..      10     227 .. 0.73
   2 ?    4.1   0.9     0.013        33      15      68 ..     748     803 ..     735     824 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00019
        Med4  72 tasiklaekrevdseeLLdYArrISkytsv...........................................p 102
                  ++ +++ ++evds+ L+d+ + IS+++++                                            
  EPX70948.1  58 VKKLQKQWENEVDSSVLFDFPKSISRTNLQfrrqgleghiidykevsediadlnaknsssflrkpasksefvrG 131
                 677888899********************988888888888888777777776666666666655555555550 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.013
        Med4  15 skslkeleehqknearilqLraeveslDekikeivksLkeyekeLkavp..dqens 68 
                 + ++k+    ++n+  + q +ae++s +ek++ + k+L+++  ++ +++  + e  
  EPX70948.1 748 EDMIKRSFSENANQSLLPQHEAEIKSNEEKLSLLKKELNDIDIQMMKECiyQSESY 803
                 556666666678999999************************99999996433333 PP

>> Pox_Ag35  Pox virus Ag35 surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.2   3.7e-05     0.096       3      56 ..     196     251 ..     195     265 .. 0.81
   2 ?   -3.2   0.0       2.4   6.3e+03      42      66 ..     494     518 ..     484     536 .. 0.73
   3 ?   -1.4   0.1      0.68   1.7e+03     111     141 ..     569     598 ..     558     601 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 3.7e-05
    Pox_Ag35   3 WsinlssgsgdsfktleeiRahlrseaedadkkeddifpe...DieiPspkqekkkr 56 
                 W  ++   s + f+tl+e+ +hl++  ++  +  dd++p+    + +Ps   +  kr
  EPX70948.1 196 WETKQVRPSMQKFTTLNELNEHLKNINSKHTE-IDDLLPDkstIVALPSSSGSVSKR 251
                 888888889999*************9988555.9*****977556799877666666 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 2.4
    Pox_Ag35  42 eDieiPspkqekkkrattprkkpak 66 
                 + i  Ps+ ++++ r  tpr + ++
  EPX70948.1 494 DKILPPSNNNNARGRGGTPRGRGTQ 518
                 334446999999*******988654 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 0.68
    Pox_Ag35 111 ksnesteddadeldeSdLkvatenIikdlkk 141
                 ++ ++  d  ++ ++S+ +++ e+ ++ lkk
  EPX70948.1 569 DTLSN-RDLNNHQEKSEVHIVIEKAVARLKK 598
                 44433.77888999************99997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1212 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       828  (0.0461822); expected 358.6 (0.02)
Passed bias filter:                      550  (0.0306766); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.83u 0.31s 00:00:01.13 Elapsed: 00:00:00.49
# Mc/sec: 7485.79
//
Query:       EPX70949.1  [L=324]
Description: pig-C [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.5e-93  311.2  23.7    7.4e-93  311.0  23.7    1.0  1  GPI2      Phosphatidylinositol N-acetylglucosaminyltransferas


Domain annotation for each model (and alignments):
>> GPI2  Phosphatidylinositol N-acetylglucosaminyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  311.0  23.7   4.1e-97   7.4e-93       1     280 []      38     313 ..      38     313 .. 0.97

  Alignments for each domain:
  == domain 1  score: 311.0 bits;  conditional E-value: 4.1e-97
        GPI2   1 WkKlLwvkqsypDnYtdetFleeLqrnprvkpydfwplvadstvivqhvcsviifvlvFvgiyqervspvsvvllssiltvlgwllwelwaskeesrss 99 
                 WkK+Lw+kq ypDnY+d++Fl+ Lqrn++++  dfw+lvads+ i+qh++sv+if++vFv+i+++r+s   v ++s + +v+ +llw+l+ sk   +s+
  EPX70949.1  38 WKKVLWRKQHYPDNYIDRSFLSGLQRNVNIQVSDFWSLVADSLPISQHLSSVVIFAAVFVAIHRKRLSCGIVGITSNVSAVCAFLLWDLVLSK-PCQSR 135
                 ****************************************************************************************99865.56888 PP

        GPI2 100 raqqrlktiksalliyftllglSPiLksLTkstssDSIwalsfwlllinifffdysiekkkskekeeklvaslStnaalmastvLASRLpstlqVFsll 198
                    +    iks++li++tl+glSPiL sLTksts+DS+wa+++wl+l+niff++y +++ + +    +l++slStnaal+as+vLASRL+ +++VF+++
  EPX70949.1 136 CFLNYAGLIKSCILIVLTLVGLSPILMSLTKSTSEDSVWAIAVWLFLANIFFHEYATDSIQPH---VRLHNSLSTNAALSASVVLASRLDRSIDVFFFV 231
                 8889999*************************************************6666655...3479***************************** PP

        GPI2 199 lfsievfglfPvfrrslrhrswrlhvvltvllvllagagvgiilklllavvlllllalimgvcpwwliglqkykneiyGpWD 280
                 l ++++f+lfP+fr++++ +s+ + +++t++l+++a++ ++ + ++++a+v+l  +++i++vcp+w+i+lq++knei+GpWD
  EPX70949.1 232 LYAVHWFALFPIFRKYIHFYSFYADMLMTLVLIMTAYLSLYLVASVIIAFVFLSSIFFISFVCPIWFIKLQRFKNEIHGPWD 313
                 *********************************************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (324 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1114  (0.062134); expected 358.6 (0.02)
Passed bias filter:                      369  (0.0205812); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.28s 00:00:00.81 Elapsed: 00:00:00.46
# Mc/sec: 2101.77
//
Query:       EPX70950.1  [L=233]
Description: Smc5-6 complex non-SMC subunit 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.1e-17   63.1   0.0    2.4e-15   56.9   0.0    2.1  1  SMC_Nse1      Nse1 non-SMC component of SMC5-6 complex
     0.0048   17.5   0.1     0.0093   16.5   0.1    1.5  1  Mga           Mga helix-turn-helix domain
  ------ inclusion threshold ------
      0.021   15.1  17.7       0.04   14.2  17.7    1.4  1  zf-RING-like  RING-like domain
       0.09   12.3   0.0       0.15   11.6   0.0    1.3  1  AHJR-like     REase_AHJR-like
       0.11   12.7   0.2        0.2   11.8   0.2    1.6  1  Maf1          Maf1 regulator


Domain annotation for each model (and alignments):
>> SMC_Nse1  Nse1 non-SMC component of SMC5-6 complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.9   0.0   6.8e-19   2.4e-15       2     193 ..      15     169 ..      14     170 .. 0.80

  Alignments for each domain:
  == domain 1  score: 56.9 bits;  conditional E-value: 6.8e-19
    SMC_Nse1   2 ralLQallargi.lteeelkkvlaailsaeeevspeditqedleeyiakinealspldyeirsvrhqlgkervyyalVNttsdeetklATtfsaeeiaf 99 
                 ++ LQ+++ r + ++e+ l+ +++++++ +          + l++++++in++++  d+++ ++++ql+ +r  + + N + d+ +++AT +s+ +i+ 
  EPX70950.1  15 KFVLQYVMNRTFgVDEDVLQGLIQDLFGES----------ASLSHIMNEINKNIHNYDFKLQKIQDQLD-GRPTWHFQNVSGDPVSQMATPYSTSQIEL 102
                 678999997775478888888888997555..........89***************************.5555************************* PP

    SMC_Nse1 100 iKrlldamfetsntrrlevmaitesqavvlelarilaaaraerrstelsqeeaaadkgLtaseaeklLkrLveegWleksreGfysLdlRallE 193
                 ++r++d +++ ++ +     +i + q+  ++ ar           ++l         +L  s +e+ L+ + ++gWl++ reG  +++  al++
  EPX70950.1 103 MRRIIDWIMRADEYQ----YSIGTLQI--HKYAR-----------RDL---------SLAPSVVEAYLSAFERDGWLNH-REGVWTFTNHALVD 169
                 **********97444....34555555..44444...........123.........3888888888888888888876.57888877777776 PP

>> Mga  Mga helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.1   2.6e-06    0.0093      32      74 ..      32      74 ..      11      76 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 2.6e-06
                EHHHHHHHCT--HHHHHHHHHHHHHHCHCCT-EEETTCCEEES CS
         Mga 32 sieelaqelyiSestlkrkikelnklLkefdleltkknlklrG 74
                 ++ l+q l+  +++l ++++e+nk ++++d++l+k + +l G
  EPX70950.1 32 VLQGLIQDLFGESASLSHIMNEINKNIHNYDFKLQKIQDQLDG 74
                57889999999***********************877777777 PP

>> zf-RING-like  RING-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2  17.7   1.1e-05      0.04       1      43 []     185     220 ..     185     220 .. 0.93

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 1.1e-05
  zf-RING-like   1 CeaCkeivtqGvrCsnesCnvrlHvdCfqhyirthsskkCpkC 43 
                   C+aC+ ivt G+ C+   C   lHv+C +h     +s  Cp+C
    EPX70950.1 185 CNACRGIVTAGYVCE---CGYCLHVYCCKHLA--YVS--CPNC 220
                   **************9...9999********98..566..*999 PP

>> AHJR-like  REase_AHJR-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   4.2e-05      0.15      69     110 ..      62     104 ..      43     115 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 4.2e-05
   AHJR-like  69 eqyLqelakaveqhpgWrfelvmtndedatvsika.eeslass 110
                 + +Lq+++ +++ +p W+f+ v  +++ ++ ++ + ++  + +
  EPX70950.1  62 DFKLQKIQDQLDGRPTWHFQNVSGDPVSQMATPYStSQIELMR 104
                 568**********************998877655404444444 PP

>> Maf1  Maf1 regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.2   5.7e-05       0.2      61     120 ..      10      70 ..       4     173 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 5.7e-05
        Maf1  61 ssrktlayLiatLnasf.pdYDFss.lrsseFkkekslksvinnidstLsslveekyeelre 120
                 + +k+ + L  ++n +f  d D  + l ++ F +  sl++++n+i++++ + +  k +++++
  EPX70950.1  10 TAEKQKFVLQYVMNRTFgVDEDVLQgLIQDLFGESASLSHIMNEINKNIHN-YDFKLQKIQD 70 
                 4456667899*************999***********************99.6666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       993  (0.0553851); expected 358.6 (0.02)
Passed bias filter:                      542  (0.0302304); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.47u 0.31s 00:00:00.78 Elapsed: 00:00:00.46
# Mc/sec: 1535.84
//
Query:       EPX70951.1  [L=104]
Description: hsp10-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-25   88.7   0.0    2.3e-25   88.5   0.0    1.0  1  Cpn10     Chaperonin 10 Kd subunit


Domain annotation for each model (and alignments):
>> Cpn10  Chaperonin 10 Kd subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.5   0.0   1.3e-29   2.3e-25       2      93 .]      11     102 ..      10     102 .. 0.98

  Alignments for each domain:
  == domain 1  score: 88.5 bits;  conditional E-value: 1.3e-29
                 -EE-TTEEEEEESGG-TTS-TT----HHHHHSEEEEEEEEE-T........TS-TTS--T-EEEEEGGGTSS-GG---.EEEEEGGG--EE- CS
       Cpn10   2 ikplgdrVlvkraeeeekteggiilpdsakekpeqGvVvaVGegarnekgedvplevkvgdkVlfpkyagtkvkvdgkeylilkekdIlavi 93 
                 i pl dr+lv+r++++ kt++gi+lp+++ ek ++G V+a G+g +n++g+ +p++v  gd+Vl+p ++g+++kv ++ey +++++++lavi
  EPX70951.1  11 IVPLLDRILVQRVKADPKTASGIFLPEKSLEKLSEGRVIATGKGLMNKTGTLTPPSVAPGDRVLLPAFGGSNIKVGEQEYSLYRDHELLAVI 102
                 88****************************************************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       288  (0.0160634); expected 358.6 (0.02)
Passed bias filter:                      284  (0.0158403); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.27s 00:00:00.65 Elapsed: 00:00:00.43
# Mc/sec: 730.00
//
Query:       EPX70952.1  [L=533]
Description: acetamidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     1e-112  377.4   0.0   1.4e-112  376.9   0.0    1.2  1  Amidase   Amidase


Domain annotation for each model (and alignments):
>> Amidase  Amidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  376.9   0.0    8e-117  1.4e-112       1     451 []      76     523 ..      76     523 .. 0.96

  Alignments for each domain:
  == domain 1  score: 376.9 bits;  conditional E-value: 8e-117
                 HHHHHHHHHHHHHHHHH--EEEEEHCCCCHHHHT---TTT.......TTTT-EEEEETTB--TTSB--TTSGGGTT-B-SS--HHHHHHHHTT-EEEEE CS
     Amidase   1 elveaflkrieavneklnalvtvfieealaqAakldkkra.rgkekgpLhGvPisvKDnidvkgvpttaGskalenypaekDatvverLkkaGavilgk 98 
                 elv af+kr++ +++ ln++ +++ +eal+qA kld+++a +g+  gpLhGvPisvK++i+ kg+ +ta++ a+ + +ae+Da +v+ ++kaG v++++
  EPX70952.1  76 ELVVAFCKRAAIAQQLLNCVTELLLDEALEQATKLDEHYAtTGELVGPLHGVPISVKEHISLKGHTATASFLAKVDVVAEEDADIVHTIRKAGGVFFCR 174
                 7899************************************9********************************************************** PP

                 E--SGGG-SSSSTT-TT---BBTTCTCCB--SSSHHHHHHHHTTSSSCEEEEESSSTTHHHHHHCTSEEEE--TTSC--TTB-....-SSTTT-EEEEE CS
     Amidase  99 TnmdefamgsstensvfgptrNPwdksrtpGGSSGGsAAavAaglvplaiGtDtGGSiRiPAsfcglvGlKPtygrvSragvv....alessldvvGpl 193
                 T+ ++++m ++t++ ++g+t+NP++++ t+GGSSGG++A+++++ ++++iG+D+GGSiR PA+ +g +G++P++ r+Sr+g+     ++es+l vvGpl
  EPX70952.1 175 TTQPQSLMQLETSSRLTGTTVNPFNRKLTAGGSSGGEGALLGIRASVMGIGSDIGGSIRSPAANNGFYGFRPSTLRLSRKGCQgavkGQESILGVVGPL 273
                 *************************************************************************************************** PP

                 ESSHHHHHHHHHHHBS--TT-TTS----HHHHHHHHCTT---TT-EEEEEGGGCSS---CCHHHHHHHHHHHHHCTT.-EEEEEE-CCGGGHHHHHHHH CS
     Amidase 194 arsvedlalllrvilgedpkdstssvipeesedlaeelkkslkglriGvvkedgvasldpevqravekalkaLeeaG.hevvevelpsleealslyyli 291
                 ++s++dl+l+++++++e p+  + sv+p     l +++ + + +++iGv+++dgv++++p++qra++ +l++L++    e+++ve++++++ ++l+ ++
  EPX70952.1 274 TQSARDLNLFMKACMEEKPWLEDASVVP-----LPWRTPNLPAKIKIGVMRNDGVVTPQPPLQRAFDIVLDKLRNSSdYELIDVEPYKHKYSWDLISEL 367
                 *************************976.....9999**************************************999********************* PP

                 HHHHHHHHTTT-SSSSS---SS-SCCCCCCCHHHHCCS-HHHHHHHHHHHHHCSCCCCCCCHHHHHHHHHHHHHHHHHHCCC..BSEEEEESSSSS--B CS
     Amidase 292 lvaeassnlarylgvryerlsetkvlsellpksraellgeevkrrielgnyalsaeasskyylkaqkvrrllrrefakafee..lDvllsPtaptpapr 388
                 ++++++++                  +  l+++  e+l++ +++ +++ + + ++    + ++k  ++r+++r+++ k++++  +D+ll+P+ p pap+
  EPX70952.1 368 YWLDGGKA------------------NYDLFAKVGEPLEPMTEWIMKQPTVKDHDV---AGVWKLVAERDEYRNQYIKHLQTygVDFLLCPAGPGPAPK 445
                 ******66..................679999***********9999999766666...45************************************** PP

                 CCCCCHHHCSHHHHHGCCTTT...HHHHHTT--EEE.....EECCCCT.............TECEEEEEEESTT-HHHHH CS
     Amidase 389 lgekdktidsytvlynlldftavvvpvnlaglpals.....vpagksed............glPvGvqvigkafqeetlL 451
                 lge+++  ++yt+++nlld++++v+pv+ +++  +       p+++++             ++PvG+q++g ++++e lL
  EPX70952.1 446 LGEAKY--WTYTSVWNLLDLPSAVFPVTKVDTTLDVkdesyKPMNDDDAfqyhtykpedykDAPVGLQLVGARWEDENLL 523
                 ****87..78******************9998887766666677766559***************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (533 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       492  (0.0274416); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 3806.33
//
Query:       EPX70953.1  [L=244]
Description: N-acetyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.4e-06   27.0   0.0    5.9e-06   26.2   0.0    1.4  1  Acetyltransf_10  Acetyltransferase (GNAT) domain
     0.0013   18.8   0.0      0.005   16.9   0.0    1.8  2  Acetyltransf_9   Acetyltransferase (GNAT) domain
     0.0025   18.0   0.0     0.0042   17.3   0.0    1.4  1  Acetyltransf_1   Acetyltransferase (GNAT) family
  ------ inclusion threshold ------
      0.019   15.4   0.0      0.033   14.6   0.0    1.4  1  Acetyltransf_7   Acetyltransferase (GNAT) domain


Domain annotation for each model (and alignments):
>> Acetyltransf_10  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   0.0   1.3e-09   5.9e-06      53     126 ..     131     203 ..     119     204 .. 0.85

  Alignments for each domain:
  == domain 1  score: 26.2 bits;  conditional E-value: 1.3e-09
  Acetyltransf_10  53 hisllfVdpeyrgqGigkaLleaveeeaekdgikleltvnasp.yavpfYeklGFkavgeeqeenGirfvpMeke 126
                      ++  + + p+ +g+G  ++L++ + + ++++ +   + +++s+ + +++Ye++GF+  +  + +    ++p+e++
       EPX70953.1 131 YLVYIGILPNKQGKGCFRRLVQPIMDLCNQQ-NL-PIYLESSHpHNRAIYEHFGFRLQKTIFLKRETNHIPLEIM 203
                      45555689********************666.44.899999998***************************9986 PP

>> Acetyltransf_9  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.45     2e+03       6      41 ..       7      46 ..       3      55 .. 0.64
   2 !   16.9   0.0   1.1e-06     0.005      75     126 ..     131     184 ..     128     186 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.45
                    -GGGHHHHHHHHHHHTT----H......HHHHHHHHHHTT CS
  Acetyltransf_9  6 teedldevlellkyaFqdeespl...e.eireyfrkllee 41
                      +d++ ++++l +aF d++  l   +   ++++rkll++
      EPX70953.1  7 AAKDYKRAASVLVEAFYDDPVSLylcHcSNDKEYRKLLQD 46
                    5677888888888888887776667744445555665554 PP

  == domain 2  score: 16.9 bits;  conditional E-value: 1.1e-06
                     EEEEEEE-CCGTTS-HHHHHHHHHHHHHHHTT--EEE..E--SSHHHHHTTT-E CS
  Acetyltransf_9  75 gvtgVavapehrgrgvlskLlaraleemreegqplsl..lfPssipiYrrfGye 126
                     +++ ++  p+++g+g +++L++  ++ +++++ p+ l   +P +++iY++fG++
      EPX70953.1 131 YLVYIGILPNKQGKGCFRRLVQPIMDLCNQQNLPIYLesSHPHNRAIYEHFGFR 184
                     67789999***********************9999872246699********97 PP

>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   9.3e-07    0.0042      59     117 .]     128     183 ..     104     183 .. 0.86

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 9.3e-07
                     TEEEEEEEEESGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTEHHHHHHHHHTTE CS
  Acetyltransf_1  59 gvayieslaVspeyrgkGlGsaLlealeerareegikkivlaveedndaairlYeklGF 117
                       +y+  + + p+ +gkG  ++L++ +++ + ++++   +l+ + +  + ++ Ye +GF
      EPX70953.1 128 SSWYLVYIGILPNKQGKGCFRRLVQPIMDLCNQQNLPI-YLESSHP--HNRAIYEHFGF 183
                     568999****************************9965.9955555..45999*99**9 PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   7.4e-06     0.033      25      75 ..     130     184 ..     105     185 .. 0.68

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 7.4e-06
                     TCTEEEEE-GGGTTSSHHHHHHH.H....TTSEEEEEEEEE..THHHHHHHHHHTTEE CS
  Acetyltransf_7  25 aeitrlaVdpeyrgkGiGraLle.a....aekgiileqlel..naekaikfYeklGFe 75 
                      ++ ++ ++p+ +gkG  r+L++ +    +++++     +l  +++++++ Ye++GF+
      EPX70953.1 130 WYLVYIGILPNKQGKGCFRRLVQpImdlcNQQNL---PIYLesSHPHNRAIYEHFGFR 184
                     4566689***************974332211332...2234322236677*******7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       520  (0.0290033); expected 358.6 (0.02)
Passed bias filter:                      471  (0.0262703); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1880.42
//
Query:       EPX70954.1  [L=545]
Description: peroxin Pex32 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-39  136.2   0.5    6.7e-30  104.3   0.6    2.1  2  Pex24p    Integral peroxisomal membrane peroxin


Domain annotation for each model (and alignments):
>> Pex24p  Integral peroxisomal membrane peroxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.1   0.0   1.4e-11   2.4e-07      24     112 ..      25     115 ..       3     204 .. 0.83
   2 !  104.3   0.6   3.7e-34   6.7e-30     134     366 .]     235     470 ..     224     470 .. 0.78

  Alignments for each domain:
  == domain 1  score: 30.1 bits;  conditional E-value: 1.4e-11
      Pex24p  24 plllildkvlkiltWtnpdktlsfllvytficlvpylelvvlplllllfvvmvpaylyrhplrksslik.......keesknestsegptldeask 112
                 +l   ld vl++l W  p++t+  +l++ ++++++   ++++ +  +lf+++ +  +   ++ +s + +       + +++++s+se+pt d++++
  EPX70954.1  25 EL---LDDVLRVLLWIAPWYTCLSTLFFAWLTVLYPRPTLACSISAWLFWFTSMRNINH-SQGTSFS-QeyekeakNVSNEDTSESEHPTTDPEEQ 115
                 44...5********************************************999988876.3333333.2366677767777788889999887633 PP

  == domain 2  score: 104.3 bits;  conditional E-value: 3.7e-34
      Pex24p 134 alekflkelag...fkdenlstllfltllltpililllsrlipwrlillvlgailltyHpsvkkvllrllwrlki.vrlvvkyltgkelkka....... 221
                  l++++++ ++   +++ + + ++ ++ l+t+i+i++l    p+++++++l++++l++H++++k++   + r+++   l  k+++gk   ++       
  EPX70954.1 235 LLDAYFEPVQNlyrYSQMSNTLFFSYLPLVTAIFIFFL----PTQALFIFLSSVVLAWHSPPMKAVSLAVARISVfSSLSEKFVFGKIENEKeeeegql 329
                 56667777777655788888888888888888888888....************************999999999634444455544433334568999 PP

      Pex24p 222 .................kskekkeelikelekketadiildespetr.......kpkrftveifEnqrrwllgkgWtsslfsserydwtdetrkalkes 296
                                           ++ l k+ ++   +++++ t        +++++ +++ E+qr+w +g+gW +++++++ +++t++ r    + 
  EPX70954.1 330 eeppsipgdasereskdG-------ATTSLLKVFKNGTAPVKQEGTPnevnsneNVTEKSLHLVEHQRYW-VGVGWLNRTLPTDHPNFTSSDRNIPVAE 420
                 ****99999965544441.......4444444444422222222221344456588899***********.********************99999996 PP

      Pex24p 297 psgvdhledvkpPedWkWdekkkWrlDlepdewvkeeeekkGWvYddnkwkepstedslsketRRRrwiR 366
                 p+     +++ pP++ +W++ +kW++                W+Y+d++w +ps ++  + +tR R+w+R
  EPX70954.1 421 PT-----AQFLPPDGIAWID-DKWSIGP--------------WTYTDTFWRQPSLTQYKTAFTRFREWKR 470
                 66.....*************.*******..............***************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (545 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       791  (0.0441185); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.40
# Mc/sec: 4044.61
//
Query:       EPX70955.1  [L=502]
Description: aldehyde dehydrogenase Meu8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     1e-156  522.1   0.0   1.3e-156  521.8   0.0    1.0  1  Aldedh    Aldehyde dehydrogenase family


Domain annotation for each model (and alignments):
>> Aldedh  Aldehyde dehydrogenase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  521.8   0.0    7e-161  1.3e-156       6     462 .]      37     495 ..      32     495 .. 0.98

  Alignments for each domain:
  == domain 1  score: 521.8 bits;  conditional E-value: 7e-161
                 SSEEEEEETTTCEEEEEEE-B-HHHHHHHHHHHHHHHH..HHTTS-HHHHHHHHHHHHHHHHHTHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH CS
      Aldedh   6 setievinPatgeviakvpaataedvdaavaaAkeafk..awaklpaeeRaeiLrkaadlleerkeelaeletletGkplaearaeveeaidvlryyae 102
                 ++ i+ inPat+evi+++++a+aedv++av++A+eaf+   w+k + +eR+++Lrk+ +l++e+++ la l +l++Gkp++ a  +v++++d l+yyae
  EPX70955.1  37 ANAIPLINPATEEVIGTCANASAEDVNKAVENAHEAFEsgVWSKRNGNERGAVLRKIGQLMRENRDLLAGLDVLNCGKPTSYALFDVDSSADLLDYYAE 135
                 3669**********************************777********************************************************** PP

                 HHHHHSE.EEEEE.C.TTEEEEEEEEE-SEEEEEE-SSSCCHHHHHHHHHHHHTT-EEEEEE-TTSHHHHHHHHHHHHHTTS-TTSEEE--SSTCCHHH CS
      Aldedh 103 laekleg.evlps.s.egklalvrrePlGvvgaItPWNfPlllaawklapalaaGNtvvlKPaeetplsalllaelfeeaglPkgvlnvvtgsgsevge 198
                  ae+ e  +v+p  + +g+    +r P Gvvg+ItPWNfPl +a+wk +pala GNtvvlKP+e +p+s+l +a l++e glP+gv+nvv gsg+++g 
  EPX70955.1 136 IAENDEVtRVVPLtNaPGYVGKEKRFPRGVVGVITPWNFPLKMALWKSIPALASGNTVVLKPSEVAPWSCLEFALLCKEGGLPDGVFNVVIGSGKDTGV 234
                 ****8877999995489********************************************************************************** PP

                 HHHH-TTESEEEEES-HHHHHHHHHHHHCTTSEEEEEE---EEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHT-- CS
      Aldedh 199 alvehpevdkvsftGstevgrkiakaaaknlkrvtlElGGknplivledaDldkaveaivkgafgnaGQvCiaasrllvqesiydefveklveaakklk 297
                 al +h+++  ++ftGs  +g+ki++aa++++ +vtlElGGk+pliv++daDl  a +++++g+f+n+G+ C+aasrll++e++y+e+++ ++e+akk+ 
  EPX70955.1 235 ALSHHDKISYLAFTGSLFTGKKIMHAASDHVIPVTLELGGKSPLIVCKDADLSLACKSAAFGIFFNQGEACTAASRLLIEEDVYEEVLKGVIEEAKKIV 333
                 *************************************************************************************************** PP

                 BS-TTSTT-SB---SSHHHHHHHHHHHHHHHHTTSEEEE-TTE.SB-SSSTTEE--EEEES-TTTSHHHHS---SSEEEEEEESSHHHHHHHHHSSSEE CS
      Aldedh 298 vgdpldedtdvGPliseaqlekvekyveeakeegaklllGgereeaglekgyfvePtvlanvtpdmriaqeEiFGPVlsvikfkdeeeaieiaNdteyG 396
                  g++l+e++++GPl+s+ q+ekv ++++++ +eg +++ Gg    ++  kgyfv Pt+++n ++ +++++eE+FGPVl   +f++ eea+++aN+teyG
  EPX70955.1 334 SGNGLQENVNMGPLVSKPQYEKVLQLIQTGFDEGLNCVFGG--LPKETGKGYFVPPTIFTNAETTNTLWKEEVFGPVLITKTFRTKEEALALANATEYG 430
                 *****************************************..68999*************************************************** PP

                 SEEEEE-SBHHHHHHHHHHS-SSEEEESSSST--TTTSEB--CGGGEES-BSHHHHHHHTEEEEEE CS
      Aldedh 397 LaagvftkdleraervaerleaGnvyiNdsttgaaealpfgGvkqSglGreggkegleeytevktv 462
                 L++gvf+++ +++ ++a+++eaG++ +N+++ +++e  p+ G+k+SglG     +g+ eyt++k+v
  EPX70955.1 431 LGSGVFSTNRDTLDYFADNIEAGMCSLNTYHFSSHEL-PWIGWKHSGLGIGLATHGYYEYTRLKQV 495
                 ******************************9999998.*************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (502 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       389  (0.0216967); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3781.52
//
Query:       EPX70956.1  [L=1031]
Description: karyopherin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.2e-19   69.1   1.3    1.3e-18   66.6   0.4    2.7  2  IBN_N            Importin-beta N-terminal domain
    6.9e-09   35.0   0.0    1.6e-07   30.5   0.0    2.6  2  Cse1             Cse1
     0.0088   15.8   0.9        1.6    8.4   0.0    3.8  3  RIX1             rRNA processing/ribosome biogenesis
  ------ inclusion threshold ------
      0.042   14.1   1.1       0.33   11.3   0.1    3.3  3  HEAT             HEAT repeat
      0.065   13.2   1.0       0.18   11.8   0.0    2.3  2  Vps55            Vacuolar protein sorting 55
      0.073   11.4   3.2        1.2    7.3   0.1    3.1  3  DRIM             Down-regulated in metastasis
      0.076   12.7   2.1       0.11   12.2   0.7    2.0  2  FANCI_S3         FANCI solenoid 3
       0.15   11.9   3.5       0.87    9.4   0.3    3.2  4  MOR2-PAG1_C      Cell morphogenesis C-terminal
       0.15   12.2   0.7        1.1    9.5   0.2    2.9  2  RTP1_C1          Required for nuclear transport of RNA pol II
       0.26   11.1   1.2       0.58    9.9   0.1    2.2  3  Methyltransf_31  Methyltransferase domain
       0.35   10.8   3.7       0.29   11.1   1.2    2.2  3  DUF2150          Uncharacterized protein conserved in archaea


Domain annotation for each model (and alignments):
>> IBN_N  Importin-beta N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.6   0.4   8.1e-22   1.3e-18       1      74 []      21      97 ..      21      97 .. 0.94
   2 ?   -0.9   0.0      0.99   1.6e+03      25      40 ..     515     530 ..     505     535 .. 0.74

  Alignments for each domain:
  == domain 1  score: 66.6 bits;  conditional E-value: 8.1e-22
                HHHHHHHHHCSTCHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHHHHGGSCCCHC...GSXHHHHHHHHHHHHHHHHH CS
       IBN_N  1 AekqLkqlekqpgflsallqilanseselevRqlAalyLknlitkhWsdeeekq...slpseekeqIrnnllnllgs 74
                Ae +Lkqlek p+f++a+lq+l+++++ l+++q+A++yLkn i ++W + ++++    +p+e+k+++r+nll  l++
  EPX70956.1 21 AELSLKQLEKDPNFVLAVLQLLSDQSNALPTQQAAVIYLKNRIARSWATIDDAPsplDIPAEQKALFRQNLLPILLQ 97
                899*********************************************66666688****************99975 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.99
                 TTSHHHHHHHHHHHHH CS
       IBN_N  25 seselevRqlAalyLk 40 
                 ++s+l+vR+ Aal L+
  EPX70956.1 515 QDSDLPVRVQAALALQ 530
                 455666**99999986 PP

>> Cse1  Cse1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.5   0.0   9.6e-11   1.6e-07     184     369 ..     346     528 ..     277     529 .. 0.80
   2 ?    1.3   0.0     0.074   1.2e+02     114     149 ..     754     789 ..     732     805 .. 0.82

  Alignments for each domain:
  == domain 1  score: 30.5 bits;  conditional E-value: 9.6e-11
                 HHHHHHHHTHHHHHS--HHHHHHHHHSHHHHHHHHSCS.S---SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-.T.TT-HHHHHHHHHHH CS
        Cse1 184 vlkeiiekvvlpnvtlResDeElFEdepieyirrDlEG.sdvdtRrraatdllkeLkekfeakvtevvleyvekllekyken.p.sanWkkkdlaiyLv 279
                  l+ +i   v p +++ e+DeEl+E +p+e+i++ ++   d+++   aa  +l +L++k ++  +  +l+  ++ l++y+++ p ++n ++k+ a+ +v
  EPX70956.1 346 HLRLLIGDFVFPQLCMSEEDEELWELDPVEFIHKYIDIyDDFNSADVAASRFLVRLASKRKKDTFMGILTFASDALNQYAASnPnEKNPRQKEGALRMV 444
                 577789999*************************99962689*************************************865232678999*******9 PP

                 HHHHBSS--BTTB-S-B-TTS-HHHHHHHHTCHHHH-SS-S-HHHHHHHHHHHHHHGGGS..-HHHHHHHHHHHHHHTTSS-HHHHHHHHHH CS
        Cse1 280 tslavkgevtksGvtstnelvdvvdFfakeiapdLeadvneepilkvdaiKyivtFRsql..skeqlievlpllikfLksesvvvytYaaia 369
                  +++    +++s v  +     ++dF+  +++p+     +    l+  a   i  F ++    k ql+ v  ++++ L++++  v   aa+a
  EPX70956.1 445 AAVSNSILSKNSPVAGM-----MQDFIVAHVMPEFS---SPVGYLRSRACEMINRFSEITwnDKSQLLIVYHSVLNCLQDSDLPVRVQAALA 528
                 99988877777776654.....57999999999998...66777999999999999876533577888888899999998888777777765 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.074
                 HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTC- CS
        Cse1 114 asicelvqlyvekyeeefepyleefveavWnllvsv 149
                  + c l++l +  y   +++y++ f+e+  nll   
  EPX70956.1 754 IAACKLMELLMLNYRGLLDQYVPTFIEIAGNLLLVS 789
                 466999************************998644 PP

>> RIX1  rRNA processing/ribosome biogenesis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.46   7.5e+02      49      80 ..     128     159 ..      89     209 .. 0.73
   2 ?    2.8   0.0     0.054        87      86     118 ..     223     271 ..     214     312 .. 0.77
   3 !    8.4   0.0     0.001       1.6     127     178 ..     540     592 ..     534     601 .. 0.89

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.46
        RIX1  49 rilsLlqskspegrwaGvcLakvtveesgeel 80 
                  + +L+qs+++ ++ aG+  ++ ++ + +++l
  EPX70956.1 128 FTVNLVQSNDQCEVYAGLICLHELAKVYRWRL 159
                 56788888888888888877777766555554 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.054
        RIX1  86 tWlrallsiLekp........dp........pavlelaistlsriftlt 118
                  W++ ll++++kp        dp        + +++ a  +l+rif++ 
  EPX70956.1 223 AWIQLLLAVVQKPlpasvtalDPemrqshvwHKCKKWAYYSLNRIFSRY 271
                 6************988888883355556788899999999999999875 PP

  == domain 3  score: 8.4 bits;  conditional E-value: 0.001
        RIX1 127 Eiltpnlpkfitallqlleee.letvlealstllplhPttfRpfankirslll 178
                 ++ t ++p+++++ll l++e  ++   +++ + +  ++  + pfa+++ + l+
  EPX70956.1 540 DVMTAHVPTIMQNLLYLANEIdIDALSSCMEEFVSSFSHELTPFAAQLAKQLR 592
                 68999**************7799999999999**************9988776 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       9.8   1.6e+04       5      13 ..      38      46 ..      37      48 .. 0.81
   2 ?   11.3   0.1    0.0002      0.33       4      30 ..     509     535 ..     506     536 .. 0.89
   3 ?   -3.2   0.0       9.7   1.6e+04       5      16 ..     984     995 ..     981    1003 .. 0.78

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 9.8
                HHHHHT-SS CS
        HEAT  5 llkllsDps 13
                +l+llsD+s
  EPX70956.1 38 VLQLLSDQS 46
                7999***87 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 0.0002
                 HHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   4 lllkllsDpspeVReaAakaLgalaev 30 
                  +l++l+D++  VR  Aa+aL  l+++
  EPX70956.1 509 SVLNCLQDSDLPVRVQAALALQPLMRH 535
                 589******************988876 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 9.7
                 HHHHHT-SSHHH CS
        HEAT   5 llkllsDpspeV 16 
                 ++  l+D+sp V
  EPX70956.1 984 FMVHLKDNSPVV 995
                 456699*99988 PP

>> Vps55  Vacuolar protein sorting 55
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.2       2.3   3.7e+03      30      94 ..     171     229 ..     166     233 .. 0.54
   2 ?   11.8   0.0   0.00011      0.18      17      52 ..     864     899 ..     848     919 .. 0.74

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 2.3
       Vps55  30 vvlfyllaplPnliakrlsssedseessalkdlakFltgvlvvsgiaLpi.vLahagiikwgalil 94 
                 ++    + p+ + ia++l + e   ++++ + l   l ++  v ++ Lp+ +La+ +i+ w  l+l
  EPX70956.1 171 SA----IFPIILQIAHNLINME---DNDSGEMLRLILKTFKSVIALELPTeLLANDMILAWIQLLL 229
                 33....3344444444444322...23444555556677777888888874556666666666655 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 0.00011
       Vps55  17 lsCalyknwwpLlvvlfyllaplPnliakrlsssed 52 
                 ++ al++nw  ++++l+ ll  lPn++a r + +++
  EPX70956.1 864 VALALQDNWNHIMKILISLLKTLPNALAARAELEKE 899
                 67799*************************886664 PP

>> DRIM  Down-regulated in metastasis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1      0.66   1.1e+03     349     368 ..     177     208 ..     166     242 .. 0.60
   2 ?    7.3   0.1   0.00075       1.2     537     597 ..     483     543 ..     481     555 .. 0.81
   3 ?    4.7   0.1    0.0047       7.6     209     278 ..     542     616 ..     537     624 .. 0.76

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.66
        DRIM 349 vldivenllkladeeeeee............e 368
                 +l+i+ nl++++d+++ e              
  EPX70956.1 177 ILQIAHNLINMEDNDSGEMlrlilktfksviA 208
                 66677777776666544434444444444440 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.00075
        DRIM 537 lsAFkkineekyksltleqwlpllhnclffirdeeelsirsnAsellkrfieaaaskseee 597
                   A + in+  + +++ + +l+++++ ++   ++++l +r  A+ +l+ ++ +++ ++  +
  EPX70956.1 483 SRACEMINRFSEITWNDKSQLLIVYHSVLNCLQDSDLPVRVQAALALQPLMRHVEVHDVMT 543
                 56777788887789999********99999999*****************99998776555 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.0047
        DRIM 209 lapflpkllklllyclaaaqrrlksssee......eeeeeeevlasllkniRqlglkcLvdlfsnfgesedwspyl 278
                 ++ ++p++++ lly+ +  + ++ ss  e      + e +    a+l+k++R + lk +++ +++ ++ ed+++ +
  EPX70956.1 542 MTAHVPTIMQNLLYLANEIDIDALSSCMEefvssfSHELT-PFAAQLAKQLRDTFLKFMQESIEQSNTNEDFDTLV 616
                 689************9999954444433356665322232.5556********************99888998765 PP

>> FANCI_S3  FANCI solenoid 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0         5   8.2e+03     161     181 ..      29      49 ..      10      59 .. 0.70
   2 ?   12.2   0.7   6.6e-05      0.11     115     180 ..     565     639 ..     537     655 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 5
    FANCI_S3 161 sKlallLveilelLskkleps 181
                 +K++  ++ +l+lLs++ +  
  EPX70956.1  29 EKDPNFVLAVLQLLSDQSNAL 49 
                 777777888888888777654 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 6.6e-05
    FANCI_S3 115 yesklseFLkaigeeedlteklkelikqlqrvlvnflsedeedesi...........sKlallLveilelLskklep 180
                  +s ++eF++++  +++lt ++++l kql++ + +f++e+ e++++           s  a+ ++++l++++ +le 
  EPX70956.1 565 LSSCMEEFVSSF--SHELTPFAAQLAKQLRDTFLKFMQESIEQSNTnedfdtlvddkSIAAIGILNTLSTMILSLEN 639
                 678899******..9**************************999999999999997777789999999999988875 PP

>> MOR2-PAG1_C  Cell morphogenesis C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       3.1     5e+03     184     208 ..      91     115 ..      84     125 .. 0.85
   2 ?    1.3   0.0      0.16   2.5e+02     150     177 ..     281     309 ..     204     355 .. 0.76
   3 ?    9.4   0.3   0.00053      0.87     107     177 ..     529     600 ..     488     605 .. 0.76
   4 ?   -3.5   0.0       4.5   7.3e+03     148     177 ..     719     748 ..     715     763 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 3.1
  MOR2-PAG1_C 184 llgllengpewlrrktlqiLkvllq 208
                  ll +l+++p   r++++ iL+++l+
   EPX70956.1  91 LLPILLQSPIFTRSHLMAILNIILS 115
                  6778889999999999999999986 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.16
  MOR2-PAG1_C 150 akgrfr.tkddflkqvvkalreayfpehe 177
                  + +++r  +++f++++v+++ e+y+++++
   EPX70956.1 281 SANKYRnFAKNFISNIVPSILETYLQQTA 309
                  5678888899**************98875 PP

  == domain 3  score: 9.4 bits;  conditional E-value: 0.00053
  MOR2-PAG1_C 107 LPrllqaleeke.edqkvlevAenlaalaeekglenLarvltsyakgrfrtkddflkqvvkalreayfpehe 177
                  L  l++++e ++ ++ +v ++ +nl  la+e + ++L+++++++ ++   +   f +q+ k lr+++++ ++
   EPX70956.1 529 LQPLMRHVEVHDvMTAHVPTIMQNLLYLANEIDIDALSSCMEEFVSSFSHELTPFAAQLAKQLRDTFLKFMQ 600
                  33344444433358999999**************************9999*****************98765 PP

  == domain 4  score: -3.5 bits;  conditional E-value: 4.5
  MOR2-PAG1_C 148 syakgrfrtkddflkqvvkalreayfpehe 177
                  +y  ++f ++ d+++ +v  + + + +eh 
   EPX70956.1 719 TYGGKQFAARPDYIAAMVDIILQVFNSEHL 748
                  677889999999999999999999988885 PP

>> RTP1_C1  Required for nuclear transport of RNA pol II C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       2.6   4.2e+03       9      27 ..      45      63 ..      15      87 .. 0.65
   2 ?    9.5   0.2   0.00066       1.1       1      46 [.     507     554 ..     507     616 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 2.6
     RTP1_C1  9 qdpllpvrahglvlLrkli 27
                q++ lp++  +++ L++ i
  EPX70956.1 45 QSNALPTQQAAVIYLKNRI 63
                3345666666666666555 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00066
     RTP1_C1   1 lqealkdlqdpllpvrahglvlLrkliekkske..avldiekilklll 46 
                 ++++l+ lqd+ lpvr+++ + L+ l+++ + +   ++++++i++ ll
  EPX70956.1 507 YHSVLNCLQDSDLPVRVQAALALQPLMRHVEVHdvMTAHVPTIMQNLL 554
                 5678999*******************9999877555556666666554 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       3.5   5.7e+03      70      95 ..     497     522 ..     486     553 .. 0.66
   2 ?    9.9   0.1   0.00036      0.58      43     102 ..     583     645 ..     576     711 .. 0.76
   3 ?   -3.4   0.0       4.5   7.4e+03      79     114 ..     962    1004 ..     944    1023 .. 0.59

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 3.5
  Methyltransf_31  70 ledekfDlilsnevlnaladpdkile 95 
                      ++d++  li+ ++vln+l d+d   +
       EPX70956.1 497 WNDKSQLLIVYHSVLNCLQDSDLPVR 522
                      67766678999999999999887766 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00036
  Methyltransf_31  43 lArenaqklgldnveFeqgdieeleklledekfDlilsnevl......naladpdkileeiervlk 102
                      +A + a++l  + ++F q++ie+ +++   e fD ++++  +      n+l+ +   le+  +vl+
       EPX70956.1 583 FAAQLAKQLRDTFLKFMQESIEQSNTN---EDFDTLVDDKSIaaigilNTLSTMILSLENTVDVLR 645
                      78999999999************8866...78*******555333444444444444444444443 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 4.5
  Methyltransf_31   79 lsnevl....naladpdkileeiervlkpggilliedpr...l 114 
                       l+ ++l     ++ +p + ++e    lk+++ ++++d+     
       EPX70956.1  962 LDEDPLfhtsLDQIEPFSLFQEFMVHLKDNSPVVMQDMVknlN 1004
                       5555555444455555566677777788888888888873321 PP

>> DUF2150  Uncharacterized protein conserved in archaea (DUF2150)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       3.1   5.1e+03      23      63 ..      14      56 ..       7      61 .. 0.70
   2 ?   -3.9   0.0         7   1.1e+04      59      79 ..     437     457 ..     430     476 .. 0.52
   3 ?   11.1   1.2   0.00018      0.29      14      79 ..     590     657 ..     588     683 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 3.1
     DUF2150 23 eedseeleaavllnlqdD..vilavlkiikaveeeelskeeAl 63
                ++++ ++    l +l++D  ++lavl+++++  +   +++ A+
  EPX70956.1 14 DPNTRTQAELSLKQLEKDpnFVLAVLQLLSDQSNALPTQQAAV 56
                4444344466788888886679999999999888877777776 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 7
     DUF2150  59 keeAleeleevreivleevee 79 
                 ke Al  +++v + +l++ + 
  EPX70956.1 437 KEGALRMVAAVSNSILSKNSP 457
                 455555555555544444443 PP

  == domain 3  score: 11.1 bits;  conditional E-value: 0.00018
     DUF2150  14 rvkeedldle.edseele.aavllnlqdDvilavlkiikaveeeelskeeAleeleevreivleevee 79 
                 +++++ l++  e+ e+ +  + +++l dD  +a + i++++    ls e++++ l+e++ i+l  +++
  EPX70956.1 590 QLRDTFLKFMqESIEQSNtNEDFDTLVDDKSIAAIGILNTLSTMILSLENTVDVLREIEVILLPIISF 657
                 5666677777344445558999***************************************9988877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1031 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       711  (0.0396564); expected 358.6 (0.02)
Passed bias filter:                      553  (0.0308439); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.78u 0.26s 00:00:01.04 Elapsed: 00:00:00.41
# Mc/sec: 7506.67
//
Query:       EPX70957.1  [L=403]
Description: actin-like protein Arp6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-76  257.8   0.0    8.5e-76  255.2   0.0    1.8  1  Actin     Actin


Domain annotation for each model (and alignments):
>> Actin  Actin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  255.2   0.0   4.7e-80   8.5e-76       3     405 ..       6     400 ..       4     402 .. 0.93

  Alignments for each domain:
  == domain 1  score: 255.2 bits;  conditional E-value: 4.7e-80
       Actin   3 evsavVlDnGssttraGyagedaPkavipslvgkprgrkveaklyvgde..altkrpelevrspvedGvvedwdaveelwehvlkee..lkvdpeehpl 97 
                 + +++VlDnG+++++aG+ag ++    ip+++ ++++ +   +l++gde  ++++ + l++r+  e+G++++w   +++w++v+++    +   + h+l
  EPX70957.1   6 PAKTIVLDNGAYNVKAGFAGGNV--FEIPNCLTRSKDGN---RLFLGDElsNCNDFTTLQFRRAHEKGYLVNWSTETAVWDQVMRRLgiTEPSMDGHSL 99 
                 6799*****************98..569********996...9******988889******************************98434444588*** PP

       Actin  98 lltepplnppkqrekalEivfEkfkvpalylaksavlsafasgks..............tglvvDsGasvtsvvpVldGyvLkkairrsdlgGkaLteq 182
                 +lt+pp++ p+   +++++vfE+f++ a+  ++ a l ++ +                 + lv+DsG+s t+v+pV+d ++ ++a+rr d+gG++Lt++
  EPX70957.1 100 ILTQPPFTMPSIELNTIQLVFEEFGFDAYLASTPAELISWDHECFtegdeasyknahgeCVLVIDSGYSFTHVIPVIDSQIQENAVRRIDVGGRFLTNY 198
                 **********************************9999987665567788************************************************* PP

       Actin 183 lkellssknvevtprylikkkkvveaessaekeelekltesyktleeeevleeiKesvcevsedpegdeeksssspeks....YeLPDg.......... 267
                 lke++s++                                +y+++ee+++++eiKesvc+vs+++ +d + ++ +p+++    Y LPD           
  EPX70957.1 199 LKEVISYR--------------------------------KYNMMEETYLMNEIKESVCFVSQNFTKDLNLAQMKPKSKydilYALPDYssgklghvvk 265
                 *******8................................9**************************99999977777755557****99********* PP

       Actin 268 ........seiklgeeRfkvpEiLFdpsligsesaleeekskllgiselivaainacdvdlrpeLlanivvtGGnsllpglteRlekelaqlaskgvkv 358
                         +++kl +eRf  pE+LF ps++g ++a         gi+e i+++++  + ++r+ Ll n+v  GGn  +pg++eRl++el+ l++++v +
  EPX70957.1 266 dlnkvtdqQVLKLANERFASPELLFSPSDVGLQEA---------GIPEAIMQSVQGFPEEIRALLLGNVVTIGGNCKFPGFNERLNAELRSLTPEDVDL 355
                 ******988************************99.........******************************************************* PP

       Actin 359 kiiapeeerkysaWiGGSiLAslgtfqqlwvskqEYeEqGssvverk 405
                 +i +p+ +++  aW  G  + s ++ +   +sk+EY E+G+++  r+
  EPX70957.1 356 RIFQPS-NPSTYAWNRGGHMPS-EHWNANSISKSEYLEHGPNILYRR 400
                 ******.999999975555554.4566778************99887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (403 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       458  (0.0255452); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2884.63
//
Query:       EPX70958.1  [L=546]
Description: Hsk1-Dfp1 kinase complex regulatory subunit Dfp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.9e-38  130.0   0.9    1.9e-37  128.3   0.0    2.4  3  Dfp1_Him1_M  Dfp1/Him1, central region
    4.4e-21   74.7   1.0    9.2e-21   73.7   1.0    1.6  1  zf-DBF       DBF zinc finger
    2.7e-05   24.5   1.7    4.1e-05   23.9   0.2    2.1  2  BRCT_2       BRCT domain, a BRCA1 C-terminus domain
    3.2e-05   24.2   0.1    0.00011   22.5   0.1    2.0  1  BRCT         BRCA1 C Terminus (BRCT) domain
    3.6e-05   23.6   0.0    7.8e-05   22.5   0.0    1.6  1  PTCB-BRCT    twin BRCT domain
  ------ inclusion threshold ------
      0.024   15.0   0.2      0.059   13.7   0.2    1.6  1  zf-C2H2_2    C2H2 type zinc-finger (2 copies)


Domain annotation for each model (and alignments):
>> Dfp1_Him1_M  Dfp1/Him1, central region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       1.7   4.9e+03      94     116 ..     126     144 ..      97     149 .. 0.64
   2 !  128.3   0.0   6.5e-41   1.9e-37       1     126 [.     197     315 ..     197     316 .. 0.95
   3 ?   -3.4   0.1       3.7   1.1e+04      33      38 ..     339     344 ..     326     372 .. 0.55

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1.7
  Dfp1_Him1_M  94 piivreykkeakkekdgewPvlr 116
                     + e+k+++kk     +P++r
   EPX70958.1 126 KAKLLEWKRQYKK----AFPNFR 144
                  3445566444433....366665 PP

  == domain 2  score: 128.3 bits;  conditional E-value: 6.5e-41
  Dfp1_Him1_M   1 dilskArelkmkiWsleKl.qrvLknllekdsekkkakaaakskaakeeedLsqlLkneklyGpsdrdptakrkdlhyFkgpyvlveDleqelrpiiv 97 
                  d+l+kAr+l+mkiWs+eKl +rvLk+lle+d+   ++++++        +dLs lL  ek++G+++rd ++ r+d+++Fkgpy++v+D+++ ++pi++
   EPX70958.1 197 DVLTKARQLNMKIWSMEKLcNRVLKTLLEEDPFAPSSSQKQ-------GNDLSYLLYVEKVQGTNERDLSVPRQDFVHFKGPYLYVHDIASAYKPILL 287
                  9******************99**********9777766654.......89************************************************ PP

  Dfp1_Him1_M  98 reykkeakkekdgewPvlrsttegrcpFv 126
                  re++k ++++ d +wP++r+t+ grcpFv
   EPX70958.1 288 REWPKPVNDK-DVPWPTFRATSIGRCPFV 315
                  ***9999888.9****************8 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 3.7
  Dfp1_Him1_M  33 kkkaka 38 
                  ++++++
   EPX70958.1 339 SQEQQQ 344
                  111111 PP

>> zf-DBF  DBF zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.7   1.0   3.1e-24   9.2e-21       1      43 [.     495     537 ..     495     539 .. 0.96

  Alignments for each domain:
  == domain 1  score: 73.7 bits;  conditional E-value: 3.1e-24
      zf-DBF   1 kksGYCEnCrvkfedleeHlksekHrkFaenssnfeelDelis 43 
                 +k+GYCEnCr+kf+++e H++ ++HrkFaen++nf+elDel +
  EPX70958.1 495 PKPGYCENCREKFDNFEMHIRGRRHRKFAENDENFKELDELFE 537
                 59**************************************986 PP

>> BRCT_2  BRCT domain, a BRCA1 C-terminus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1       2.5   7.3e+03      47      55 ..      53      63 ..      18      82 .. 0.47
   2 !   23.9   0.2   1.4e-08   4.1e-05       3      64 ..     138     199 ..     136     202 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 2.5
      BRCT_2 47 iaesneee..l 55
                ++e+n+e+  +
  EPX70958.1 53 TVETNNENsvT 63
                22222222222 PP

  == domain 2  score: 23.9 bits;  conditional E-value: 1.4e-08
      BRCT_2   3 klFeglrFYindaepspsreklkklIeknGGevvetitsavyiviaesneee.laekrkrrvv 64 
                 k F ++rFY+ d ++s+ ++++k++I + GG+v+   + +v++v+++++ ++ +a++ k++v+
  EPX70958.1 138 KAFPNFRFYL-DGFDSNLQQRVKRQIVQLGGHVETFFSGNVTHVVTTRSIQDiAAKNSKQDVL 199
                 6799******.99***********************************988887777777766 PP

>> BRCT  BRCA1 C Terminus (BRCT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.1   3.8e-08   0.00011       4      74 ..     138     214 ..     135     217 .. 0.91

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 3.8e-08
                 TTTTTEEEEEEESTSSHHHHHHHHHHHHTTCEEESSCSTTSSEEEESSS.......HSHHHHHHHHHHTTSEEEETHH CS
        BRCT   4 llfhgckfvitgvldnftrdeleelikehGGkvttevskktthlvvgep.......esrslkylealklnipivheew 74 
                 + f ++ f++  ++d+   +  ++ i  +GG v t +s ++th+v+  +       +s++  +++a +ln +i + e 
  EPX70958.1 138 KAFPNFRFYL-DGFDSNLQQRVKRQIVQLGGHVETFFSGNVTHVVTTRSiqdiaakNSKQDVLTKARQLNMKIWSMEK 214
                 6799******.*****999999***********************88888889888899999**********999875 PP

>> PTCB-BRCT  twin BRCT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   2.6e-08   7.8e-05       2      43 ..     144     185 ..     143     213 .. 0.79

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 2.6e-08
                 EEEEECB-TTCHHHHHHHHHHTT-EEESSEETT-SEEEECSS CS
   PTCB-BRCT   2 vicvtgysgddrkslqklieamGaeyskdltksvTHLicksg 43 
                 ++++ g++++  ++++++i+++G+++ + ++ +vTH++ +++
  EPX70958.1 144 RFYLDGFDSNLQQRVKRQIVQLGGHVETFFSGNVTHVVTTRS 185
                 67999*********************************9443 PP

>> zf-C2H2_2  C2H2 type zinc-finger (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.2     2e-05     0.059      38      95 ..     482     538 ..     473     542 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 2e-05
   zf-C2H2_2  38 glleylrekieekleClyCekefkslealreHmkkkgHckineeeeeekkeiekfydf 95 
                  l +  ++ki  + +  yCe+ +++ ++++ H++ ++H+k++ e++e+ ke++++++ 
  EPX70958.1 482 MLHNANQRKIRIDPKPGYCENCREKFDNFEMHIRGRRHRKFA-ENDENFKELDELFEL 538
                 56666777888777778998888999***************6.5678889***99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (546 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1343  (0.0749066); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 3911.84
//
Query:       EPX70959.1  [L=1295]
Description: vigilin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   2.1e-105  344.6  54.4    4.8e-12   45.5   0.5   15.6 14  KH_1             KH domain
    1.9e-07   30.8  33.5      0.067   13.0   0.9   10.0 11  KH_2             KH domain
    6.9e-05   22.8   6.6        1.2    9.1   0.0    5.9  7  BMC              BMC domain
    0.00021   21.2   0.1      0.028   14.4   0.1    4.0  4  MOEP19           KH-like RNA-binding domain
     0.0029   17.5  30.2       0.13   12.1   0.1    7.6  6  SLS              Mitochondrial inner-membrane-bound regulator
     0.0041   17.5   0.0        0.2   12.1   0.0    3.1  3  FCD              FCD domain
  ------ inclusion threshold ------
      0.079   12.8   0.0       0.24   11.3   0.0    1.8  1  SLBB             SLBB domain
       0.86    9.9   9.0       0.78   10.0   0.2    4.2  4  Seryl_tRNA_N     Seryl-tRNA synthetase N-terminal domain
        1.1    9.7   3.4         13    6.2   0.0    4.3  5  Secretin_N       Bacterial type II/III secretion system short


Domain annotation for each model (and alignments):
>> KH_1  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.4   9.2e-05      0.18      22      65 ..     195     236 ..     193     237 .. 0.87
   2 !   40.8   0.5   7.3e-14   1.5e-10       1      65 [.     244     335 ..     244     336 .. 0.91
   3 !   16.2   0.0   3.4e-06    0.0068       1      61 [.     346     408 ..     346     412 .. 0.87
   4 !   26.7   0.3   1.8e-09   3.6e-06       4      63 ..     427     483 ..     425     486 .. 0.87
   5 ?    2.3   0.0     0.077   1.5e+02      36      64 ..     539     571 ..     525     573 .. 0.75
   6 !   14.9   0.0   8.8e-06     0.018       5      54 ..     587     636 ..     584     645 .. 0.73
   7 !   24.7   0.0   7.7e-09   1.5e-05       2      65 ..     667     733 ..     666     734 .. 0.85
   8 !   33.0   0.3   1.9e-11   3.9e-08       3      65 ..     751     805 ..     749     806 .. 0.88
   9 !   43.9   0.1   7.5e-15   1.5e-11       2      65 ..     817     889 ..     816     890 .. 0.91
  10 !   38.5   2.5   3.7e-13   7.4e-10       2      65 ..     902     963 ..     901     964 .. 0.85
  11 !   21.9   0.0   5.6e-08   0.00011       3      58 ..     976    1038 ..     973    1043 .. 0.74
  12 !   40.4   1.4   9.6e-14   1.9e-10       3      66 .]    1059    1121 ..    1057    1121 .. 0.92
  13 !    8.5   0.0   0.00086       1.7      21      64 ..    1146    1215 ..    1142    1217 .. 0.72
  14 !   45.5   0.5   2.4e-15   4.8e-12       4      66 .]    1230    1288 ..    1227    1288 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 9.2e-05
                 HHHHHHHHT-EEEEES.STT...T.-EEEEEESHHHHHHHHHHHH CS
        KH_1  22 IkeIreetgakIkvpk.sedegsderevtisGspeavekAkelie 65 
                 ++ I+ +t ++I+v   s+   ++++++ i+G+ +av++A ++i 
  EPX70959.1 195 VRTIMLQTSTRINVSTaSK---TKNTTFLIQGKVAAVKAAHRQII 236
                 799**99******986444...59****************99996 PP

  == domain 2  score: 40.8 bits;  conditional E-value: 7.3e-14
                 EEEEEEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEES.STT.............................T.-EEEEEESHHHHHHHHHHHH CS
        KH_1   1 tlrilvPsslvgriIGkgGsnIkeIreetgakIkvpk.sedeg..........................sderevtisGspeavekAkelie 65 
                 t+++++P   vg++IG +G+n+k I+++tg++I++pk +++                             d + vti G+ e+ve Ak++ie
  EPX70959.1 244 TITVPCPVFVVGAVIGTNGQNLKTIMDRTGTRIQIPKrNSSAAddnetsaknekssltsptsldelepqYDLTSVTIEGDFEGVELAKKEIE 335
                 67899*******************************64444447899*********************9999*****************997 PP

  == domain 3  score: 16.2 bits;  conditional E-value: 3.4e-06
                 EEEE.EEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEE.S.STT...T.-EEEEEESHHHHHHHH CS
        KH_1   1 tlri.lvPsslvgriIGkgGsnIkeIreetgakIkvp.k.sedegsderevtisGspeavekAk 61 
                 t+ri ++P++++ ++ G  GsnI e ++++  k+++p   s+++  + + +++sG++ +v +++
  EPX70959.1 346 TIRInTIPTDMYNLLRGADGSNIAEYEQDKDLKVQIPyAySDNN-LPVNPIVLSGEKSCVRECA 408
                 578889**********************99*****996444443.99**********9999986 PP

  == domain 4  score: 26.7 bits;  conditional E-value: 1.8e-09
                 EEEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEES.STT...T.-EEEEEESHHHHHHHHHH CS
        KH_1   4 ilvPsslvgriIGkgGsnIkeIreetgakIkvpk.sedegsderevtisGspeavekAkel 63 
                 i+vP++++++i G + + I++I + tg+++ +p+ ++    ++++v ++G++ ++ + +++
  EPX70959.1 427 IPVPRRQHRFINGEKSAGIQDILRSTGCSVILPPiNS----ESDIVSVRGPAMNISDGIKM 483
                 79**********************99*****998444....69*******98888887776 PP

  == domain 5  score: 2.3 bits;  conditional E-value: 0.077
                 ES.STT.......T.-EEEEEE.SHHHHHHHHHHH CS
        KH_1  36 pk.sedeg....sderevtisG.speavekAkeli 64 
                 pk +e       +++ +v+is  + e+v +A++++
  EPX70959.1 539 PKrEE--LqeltNKSVIVEISSkDGENVRNARAAL 571
                 33233..145889999***************9987 PP

  == domain 6  score: 14.9 bits;  conditional E-value: 8.8e-06
                 EEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEES.STT...T.-EEEE.EE.SH CS
        KH_1   5 lvPsslvgriIGkgGsnIkeIreetgakIkvpk.sedegsderevti.sG.sp 54 
                 +++  l +++IG +G+n++++r++ ++   + + +ed   d++++   +G s 
  EPX70959.1 587 EIDPLLQRYVIGSKGKNLQKLRADHNVELLIGDnGED---DSNVILCfTGsSD 636
                 566667789**************99***997765555...4444444477444 PP

  == domain 7  score: 24.7 bits;  conditional E-value: 7.7e-09
                 EEEEEGGGHHHHHHTGGGHHHHHHH.HHH.T-EEEEES.STT...T.-EEEEEE.SHHHHHHHHHHHH CS
        KH_1   2 lrilvPsslvgriIGkgGsnIkeIr.eet.gakIkvpk.sedegsderevtisG.speavekAkelie 65 
                 ++++vPs ++  i+G++G ++k I  + + ++ +++ k s  ++s+++ v ++G s + v++ +++i+
  EPX70959.1 667 ETFQVPSVYHKHIVGPKGTTLKAILgNSEeNVVVQLGKvSYRSDSTDDDVYVRGfSND-VQRVMNEIK 733
                 789*********************96334599999777666655**********8877.****99997 PP

  == domain 8  score: 33.0 bits;  conditional E-value: 1.9e-11
                 EEEEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEESSTT...T.-EEEEEESHHHHHHHHHHHH CS
        KH_1   3 rilvPsslvgriIGkgGsnIkeIreetgakIkvpksedegsderevtisGspeavekAkelie 65 
                 ++ +Ps++   iIGk+Gsn+  +re+ g++I+v+        e  v+i+G +++ve+ k +ie
  EPX70959.1 751 EFDFPSQYSKNIIGKNGSNVSTLREDFGVQINVE--------EGHVRIQGIKKNVEETKSRIE 805
                 78899********************99*****86........357*****7777***999997 PP

  == domain 9  score: 43.9 bits;  conditional E-value: 7.5e-15
                 EEEEEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEESSTT.............T.-EEEEEESHHHHHHHHHHHH CS
        KH_1   2 lrilvPsslvgriIGkgGsnIkeIreetgakIkvpksedeg..........sderevtisGspeavekAkelie 65 
                 +r+ +P+++++ +IG  G+ +k+++e+  +++++p +ed+           s+ +e++i+Gs++av+ Ak+++ 
  EPX70959.1 817 IRVNIPNEFHRQLIGASGKYVKRLEEKFSVRVRFP-REDDLgtsggeatkpSSVDEIVIRGSKKAVASAKQELV 889
                 799***********************99*******.554445899*************************9885 PP

  == domain 10  score: 38.5 bits;  conditional E-value: 3.7e-13
                 EEEEEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEESSTT...T.-EEEEEESHHHHHHHHHHHH CS
        KH_1   2 lrilvPsslvgriIGkgGsnIkeIreetgakIkvpksedegsderevtisGspeavekAkelie 65 
                 ++i++Ps+ ++r++G+ G+++ +Ir+++ +kI++ ++++  ++   v ++Gs+e+v+ A+++i+
  EPX70959.1 902 EVIEIPSKAASRVVGRSGATVEKIRAQYDVKIDIGDEKS--EGTISVSVRGSKENVQSAIKEIK 963
                 689***********************99*****774333..356666668***********997 PP

  == domain 11  score: 21.9 bits;  conditional E-value: 5.6e-08
                  EEEEGGGHHHHHHTGGGHHHHHHHHHH.T-EEEEESSTT.............T.-EEEEEESHHHHH CS
        KH_1    3 rilvPsslvgriIGkgGsnIkeIreet.gakIkvpksedeg..........sderevtisGspeave 58  
                  ++++++++++++IG+ Gs+++eI +e+ g+  k    e  +          +d + v+++G+++   
  EPX70959.1  976 VVKIDREYHRFLIGPSGSSLQEIIKECgGTTDK---AETARlvsfsngntdEDRNSVVLRGNKQ-LV 1038
                  579************************888632...2222246667777777777777777766.44 PP

  == domain 12  score: 40.4 bits;  conditional E-value: 9.6e-14
                  EEEEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEES.STT...T.-EEEEEESHHHHHHHHHHHHH CS
        KH_1    3 rilvPsslvgriIGkgGsnIkeIreetgakIkvpk.sedegsderevtisGspeavekAkeliee 66  
                  ++ vP++ +++iIG+ Gs+ ++I+++t ++ ++p+  ++  ++   +ti+Gs e+++kA+++i+e
  EPX70959.1 1059 TVDVPQRSISSIIGRMGSSRRDIEKKTSTSLTIPNvLDP--EQLVKITIIGSNENCDKAIQMIQE 1121
                  789*******************************76665..59999999**9999********96 PP

  == domain 13  score: 8.5 bits;  conditional E-value: 0.00086
                  HHHHHHHHHT-EEEEES.STT............................T.-EEEEEESHHHHHHHHHHH CS
        KH_1   21 nIkeIreetgakIkvpk.sedeg.........................sderevtisGspeavekAkeli 64  
                   I+++r + ++ ++vp+ s+  +                         ++  ++ti+G +e+vekA+  +
  EPX70959.1 1146 IIRRLRTDLKVFVDVPSvSKQLEgseivledneedaypwklvtkqkntDNKATLTIRGHKENVEKAISSL 1215
                  6777777557777777433333356667777777778888888888889999******9999****9765 PP

  == domain 14  score: 45.5 bits;  conditional E-value: 2.4e-15
                  EEEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEESSTT...T.-EEEEEESHHHHHHHHHHHHH CS
        KH_1    4 ilvPsslvgriIGkgGsnIkeIreetgakIkvpksedegsderevtisGspeavekAkeliee 66  
                  ++vP sl++ iIG gGs I++Ir+  ++kI+vp + +   + ++++i+Gs  + +kAk+li e
  EPX70959.1 1230 LSVPPSLHRHIIGAGGSAINKIRKAAQVKIDVP-RTP---GVDIIVIQGSHSGAAKAKDLIIE 1288
                  68**********************78******9.555...689*****************975 PP

>> KH_2  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.0   0.1    0.0013       2.5      37      59 ..     255     277 ..     253     283 .. 0.88
   2 ?   -3.4   0.1       4.4   8.7e+03      19      36 ..     328     345 ..     319     349 .. 0.58
   3 ?   -0.1   0.0      0.42   8.3e+02      42      61 ..     559     578 ..     559     589 .. 0.87
   4 ?    4.8   0.1     0.013        25      39      53 ..     596     610 ..     593     622 .. 0.84
   5 ?   -0.0   0.0       0.4   7.9e+02      39      62 ..     679     701 ..     675     718 .. 0.83
   6 !   13.0   0.9   3.4e-05     0.067      39      71 ..     762     793 ..     758     803 .. 0.84
   7 ?   -0.4   0.2       0.5     1e+03      39      57 ..     829     847 ..     792     851 .. 0.82
   8 ?    4.2   2.3      0.02        39      37      64 ..     912     939 ..     901     981 .. 0.75
   9 ?   -1.0   0.1      0.78   1.5e+03      36      57 ..     984    1005 ..     966    1013 .. 0.75
  10 ?   -2.0   0.0       1.6   3.2e+03      39      58 ..    1070    1089 ..    1051    1105 .. 0.84
  11 !   12.6   0.2   4.5e-05      0.09      39      62 ..    1240    1263 ..    1235    1273 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0013
                 HHHHTGGGHHHHHHHHHHHHHHH CS
        KH_2  37 givIGkgGsnikkigkelrkdie 59 
                 g vIG +G+n+k+i    + +i+
  EPX70959.1 255 GAVIGTNGQNLKTIMDRTGTRIQ 277
                 89************999999985 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 4.4
                 EEECCSCEEEEEEEESCH CS
        KH_2  19 eIertanrviiviresqp 36 
                 e+ +++   ii +r+s+ 
  EPX70959.1 328 ELAKKEIESIINERTSHT 345
                 444444455666666654 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.42
                 GGGHHHHHHHHHHHHHHHHH CS
        KH_2  42 kgGsnikkigkelrkdiekl 61 
                 k G+n+++ +++l k+ie++
  EPX70959.1 559 KDGENVRNARAALIKIIEQF 578
                 78***************976 PP

  == domain 4  score: 4.8 bits;  conditional E-value: 0.013
                 HHTGGGHHHHHHHHH CS
        KH_2  39 vIGkgGsnikkigke 53 
                 vIG +G+n++k++++
  EPX70959.1 596 VIGSKGKNLQKLRAD 610
                 9***********986 PP

  == domain 5  score: -0.0 bits;  conditional E-value: 0.4
                 HHTGGGHHHHHHHHHHHHHHHHHH CS
        KH_2  39 vIGkgGsnikkigkelrkdiekle 62 
                 ++G +G ++k+i  + ++++  ++
  EPX70959.1 679 IVGPKGTTLKAILGNSEENVV-VQ 701
                 89**********999888883.44 PP

  == domain 6  score: 13.0 bits;  conditional E-value: 3.4e-05
                 HHTGGGHHHHHHHHHHHHHHHHHHTTCEEEEEE CS
        KH_2  39 vIGkgGsnikkigkelrkdieklegkkVklniv 71 
                 +IGk+Gsn+ +++++++ +i ++e+++V+++ +
  EPX70959.1 762 IIGKNGSNVSTLREDFGVQI-NVEEGHVRIQGI 793
                 9*******************.599999887644 PP

  == domain 7  score: -0.4 bits;  conditional E-value: 0.5
                 HHTGGGHHHHHHHHHHHHH CS
        KH_2  39 vIGkgGsnikkigkelrkd 57 
                 +IG  G+ +k++++++  +
  EPX70959.1 829 LIGASGKYVKRLEEKFSVR 847
                 7999999999999987655 PP

  == domain 8  score: 4.2 bits;  conditional E-value: 0.02
                 HHHHTGGGHHHHHHHHHHHHHHHHHHTT CS
        KH_2  37 givIGkgGsnikkigkelrkdieklegk 64 
                  +v+G+ G++++ki+++   +i++  +k
  EPX70959.1 912 SRVVGRSGATVEKIRAQYDVKIDIGDEK 939
                 58**************999988754444 PP

  == domain 9  score: -1.0 bits;  conditional E-value: 0.78
                  HHHHHTGGGHHHHHHHHHHHHH CS
        KH_2   36 pgivIGkgGsnikkigkelrkd 57  
                     +IG  Gs +++i ke +  
  EPX70959.1  984 HRFLIGPSGSSLQEIIKECGGT 1005
                  45789*******9999987655 PP

  == domain 10  score: -2.0 bits;  conditional E-value: 1.6
                  HHTGGGHHHHHHHHHHHHHH CS
        KH_2   39 vIGkgGsnikkigkelrkdi 58  
                  +IG+ Gs  + i+k+    +
  EPX70959.1 1070 IIGRMGSSRRDIEKKTSTSL 1089
                  89999999999998876655 PP

  == domain 11  score: 12.6 bits;  conditional E-value: 4.5e-05
                  HHTGGGHHHHHHHHHHHHHHHHHH CS
        KH_2   39 vIGkgGsnikkigkelrkdiekle 62  
                  +IG gGs i+ki+k+++ +i++ +
  EPX70959.1 1240 IIGAGGSAINKIRKAAQVKIDVPR 1263
                  9****************9997554 PP

>> BMC  BMC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   0.0   0.00062       1.2      29      61 ..     209     239 ..     202     248 .. 0.72
   2 ?   -1.8   0.0       1.6   3.2e+03      38      61 ..     315     338 ..     300     349 .. 0.74
   3 ?   -0.6   0.1      0.66   1.3e+03      41      72 ..     872     905 ..     869     907 .. 0.79
   4 ?    4.7   0.2     0.015        30      36      63 ..     941     970 ..     930     980 .. 0.76
   5 ?   -3.9   0.0       7.2   1.4e+04      40      63 ..    1102    1125 ..    1096    1134 .. 0.73
   6 !    5.7   0.0    0.0072        14      28      61 ..    1186    1219 ..    1185    1232 .. 0.84
   7 ?   -1.9   0.1       1.7   3.4e+03      16      46 ..    1247    1275 ..    1241    1290 .. 0.68

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00062
                 EEEEECTTTCEEEEEEESHHHHHHHHHHHHHHH CS
         BMC  29 vgvekvgggkvtviitGdvaaVkaAveagveaa 61 
                  +++k++    t++i+G+vaaVkaA    ++ +
  EPX70959.1 209 STASKTK--NTTFLIQGKVAAVKAAHRQIIKSI 239
                 3444444..48**************88777655 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 1.6
                 CEEEEEEESHHHHHHHHHHHHHHH CS
         BMC  38 kvtviitGdvaaVkaAveagveaa 61 
                 +  v+i+Gd + V+ A +  ++ +
  EPX70959.1 315 LTSVTIEGDFEGVELAKKEIESII 338
                 56899******9999988777765 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.66
                 EEEEESHHHHHHHHHHHHHHH..CHHEEEEEEES CS
         BMC  41 viitGdvaaVkaAveagveaa..kgelvsshvip 72 
                 ++i+G+  aV +A +  ve    ++++  s+vi+
  EPX70959.1 872 IVIRGSKKAVASAKQELVELYeyEKSIAYSEVIE 905
                 7899999999999999999885446677777776 PP

  == domain 4  score: 4.7 bits;  conditional E-value: 0.015
                 TTCEEEEEEESHHHHHHHHHHHHHHH..CH CS
         BMC  36 ggkvtviitGdvaaVkaAveagveaa..kg 63 
                  g + v ++G+ ++V++A++  ++    ++
  EPX70959.1 941 EGTISVSVRGSKENVQSAIKEIKAISdeIK 970
                 467899***************999875323 PP

  == domain 5  score: -3.9 bits;  conditional E-value: 7.2
                  EEEEEESHHHHHHHHHHHHHHHCH CS
         BMC   40 tviitGdvaaVkaAveagveaakg 63  
                   ++i G+ +++  A++   e++ +
  EPX70959.1 1102 KITIIGSNENCDKAIQMIQEKVAS 1125
                  577888888999999988887744 PP

  == domain 6  score: 5.7 bits;  conditional E-value: 0.0072
                  EEEEEECTTTCEEEEEEESHHHHHHHHHHHHHHH CS
         BMC   28 lvgvekvgggkvtviitGdvaaVkaAveagveaa 61  
                  lv+ +k+++ k t++i+G  ++V+ A++  ++++
  EPX70959.1 1186 LVTKQKNTDNKATLTIRGHKENVEKAISSLEKNL 1219
                  6777888889*****************9998887 PP

  == domain 7  score: -1.9 bits;  conditional E-value: 1.7
                  HHHHHHHHSSEEEEEEEECTTTCEEEEEEES CS
         BMC   16 aaDaalKaAnVelvgvekvgggkvtviitGd 46  
                  a++++ KaA+V++   +++g    +++i+G+
  EPX70959.1 1247 AINKIRKAAQVKIDVPRTPGV--DIIVIQGS 1275
                  677788999999866666555..46777774 PP

>> MOEP19  KH-like RNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       3.7   7.4e+03      16      38 ..     668     690 ..     667     707 .. 0.82
   2 ?    0.6   0.0      0.28   5.6e+02      15      72 ..     902     960 ..     891     967 .. 0.86
   3 !   14.4   0.1   1.4e-05     0.028      16      82 ..    1059    1127 ..    1046    1130 .. 0.85
   4 ?   -0.9   0.0      0.87   1.7e+03      18      48 ..    1231    1261 ..    1228    1287 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 3.7
      MOEP19  16 vfyleawlleaiFGpdgeripei 38 
                 +f++ +   + i Gp+g+ ++ i
  EPX70959.1 668 TFQVPSVYHKHIVGPKGTTLKAI 690
                 68899999999999999999877 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.28
      MOEP19  15 lvfyleawlleaiFGpdgeripeiEqvsqtllevkaldseglaeilifGrp.rykkrvk 72 
                 +v+++ ++ + ++ G++g+ + +i     + + +   +seg + + + G+  ++++ +k
  EPX70959.1 902 EVIEIPSKAASRVVGRSGATVEKIRAQYDVKIDIGDEKSEGTISVSVRGSKeNVQSAIK 960
                 688999999999***********************************997614555555 PP

  == domain 3  score: 14.4 bits;  conditional E-value: 1.4e-05
      MOEP19   16 vfyleawlleaiFGpdgeripeiEqvsqtllev.kaldseglaeilifGrprykkrvkkmlls.lAewh 82  
                  ++ + ++ + +i G+ g+  + iE+   t l++ ++ld+e+l++i+i G+ +   ++ +m+++ +A+++
  EPX70959.1 1059 TVDVPQRSISSIIGRMGSSRRDIEKKTSTSLTIpNVLDPEQLVKITIIGSNENCDKAIQMIQEkVASQY 1127
                  67788888999**************99999998567899*********************985266655 PP

  == domain 4  score: -0.9 bits;  conditional E-value: 0.87
      MOEP19   18 yleawlleaiFGpdgeripeiEqvsqtllev 48  
                   + + l   i G  g+ i +i +  q+ + v
  EPX70959.1 1231 SVPPSLHRHIIGAGGSAINKIRKAAQVKIDV 1261
                  677888999*************999987766 PP

>> SLS  Mitochondrial inner-membrane-bound regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.6   0.8    0.0063        13      48     153 ..     200     297 ..     182     310 .. 0.76
   2 !   12.1   0.1   6.4e-05      0.13      29     170 ..     426     579 ..     410     612 .. 0.82
   3 ?    4.5   0.7     0.014        27      45     131 ..     767     849 ..     642     913 .. 0.73
   4 ?    2.6   0.4      0.05        99      43      94 ..     917     972 ..     889    1031 .. 0.77
   5 ?    1.1   7.1      0.15     3e+02      30     152 ..    1060    1206 ..     964    1222 .. 0.69
   6 ?    0.8   0.0      0.19   3.7e+02      28      90 ..    1223    1292 ..    1211    1294 .. 0.78

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0063
         SLS  48 LqnlsrihgakielnrsenklritAtkstaeyieasineilknittetvdlsellklskvdklkdl.lseelleelgrltntvievseddnnknsksel 145
                 Lq  +ri +++ + + ++ +  i+++ ++++++  +i + + + +t tv+++ ++ ++          + ++l+ ++ +t+t i+ ++++n ++ ++++
  EPX70959.1 200 LQTSTRI-NVSTASKTKNTTFLIQGKVAAVKAAHRQIIKSIGRRNTITVPCPVFVVGAV------IgTNGQNLKTIMDRTGTRIQ-IPKRN-SSAADDN 289
                 5666666.77777888888899****************************999996522......2347889*************.53333.2233344 PP

         SLS 146 kisalged 153
                 ++sa +e+
  EPX70959.1 290 ETSAKNEK 297
                 44444443 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 6.4e-05
         SLS  29 evklsprefflLltgngklLqnlsrihgakielnrsenklritAtkstaeyieasineilknittetvd...lsellkl.....skvdklkdl.lseel 118
                  + ++ r+  ++ ++++  +q++ r+ g+++ l + +++  i + +  a +i + i+ + ++++++ +d   +s++  +     s+ + l+   + +++
  EPX70959.1 426 MIPVPRRQHRFINGEKSAGIQDILRSTGCSVILPPINSESDIVSVRGPAMNISDGIKMTMERANSTIIDavnISNIFTSlkdpfSHANLLARFfIRSKF 524
                 488999***************************************************************888777776688888777778888999999 PP

         SLS 119 leelgrltntvievs....eddnnknskselkisalgedradlakRlLlwalgpsd 170
                 l++ +   ++ +       e ++ +n++ +++is+ + +++ +a+  L+ ++ +  
  EPX70959.1 525 LSQYENALKVQFH-LpkreELQELTNKSVIVEISSKDGENVRNARAALIKIIEQFP 579
                 9999999999999.444443333556778999999999999999999999995544 PP

  == domain 3  score: 4.5 bits;  conditional E-value: 0.014
         SLS  45 gklLqnlsrihgakielnrsenklritAtkstaeyieasineilknittetvdlsellkl..skvdklkdl.lseelleelgrltntvie 131
                 g+ +  l+  ++  +++n +e+ +ri++ k+++e  + +i+  ++     t+      +   ++ ++ ++   s ++ + l++ +++ ++
  EPX70959.1 767 GSNVSTLR--EDFGVQINVEEGHVRIQGIKKNVEETKSRIEAQVQALMDDTII-----RVniPNEFHRQLIgASGKYVKRLEEKFSVRVR 849
                 44444443..356677788999************9999999988888777776.....22234455556666666666666666666666 PP

  == domain 4  score: 2.6 bits;  conditional E-value: 0.05
         SLS  43 gngklLqnlsrihgakielnrs..enklrit..Atkstaeyieasineilknitte 94 
                 ++g  +++++ + ++ki++  +  e++++++  ++k++++++ ++i+ i   i+++
  EPX70959.1 917 RSGATVEKIRAQYDVKIDIGDEksEGTISVSvrGSKENVQSAIKEIKAISDEIKNQ 972
                 56667777777788888886541144454444499999999999999988888876 PP

  == domain 5  score: 1.1 bits;  conditional E-value: 0.15
         SLS   30 vklsprefflLltgngklLqnlsri..hgaki.elnrsen..klritAtkstaeyieasineilknittetvdlsellklskvdklkdllseellee 121 
                  v++++r ++ ++++ g+  +++ ++     +i  +   e+  k+ i++++++++ + + i+e +++  tet+++s+ l    +++l    +  +++ 
  EPX70959.1 1060 VDVPQRSISSIIGRMGSSRRDIEKKtsTSLTIpNVLDPEQlvKITIIGSNENCDKAIQMIQEKVASQYTETLEVSNVL----CERL---TNGPIIRR 1149
                  55555555555544444444444442323333122333441156666*****************999****9988888....5333...45588999 PP

         SLS  122 lgrltntvie...........................vseddnnknskselkisalge 152 
                  l    +++++                           v++++n +++k  l+i++  e
  EPX70959.1 1150 LRTDLKVFVDvpsvskqlegseivledneedaypwklVTKQKN-TDNKATLTIRGHKE 1206
                  9999999999888777777777666666666666554444444.45566666665555 PP

  == domain 6  score: 0.8 bits;  conditional E-value: 0.19
         SLS   28 e.....evklsprefflLltgngklLqnlsrihgakielnrse..nklritAtkstaeyieasineilkn 90  
                  e     ++ ++p    ++++  g+ +++++++ ++ki++ r+     + i+++ s a  +++ i e l+ 
  EPX70959.1 1223 EeectgYLSVPPSLHRHIIGAGGSAINKIRKAAQVKIDVPRTPgvDIIVIQGSHSGAAKAKDLIIERLSE 1292
                  3445556778888889999999*****************986511689999**99999999999888875 PP

>> FCD  FCD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.99     2e+03      85     111 ..     217     243 ..     190     246 .. 0.70
   2 ?    0.6   0.0      0.37   7.4e+02      50      65 ..     820     835 ..     795     839 .. 0.74
   3 !   12.1   0.0    0.0001       0.2      31     110 ..     960    1044 ..     946    1054 .. 0.76

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.99
         FCD  85 lalssperleeslaeHraildAirard 111
                 +++  ++  +++ a Hr+i++ i +r+
  EPX70959.1 217 TTFLIQGKVAAVKAAHRQIIKSIGRRN 243
                 444477788888999******999997 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.37
         FCD  50 eadraFHralaeaagn 65 
                  +  +FHr l++a+g 
  EPX70959.1 820 NIPNEFHRQLIGASGK 835
                 55679*********95 PP

  == domain 3  score: 12.1 bits;  conditional E-value: 0.0001
         FCD   31 ellealeeaaa..egdleefaeadraFHralaeaagnpvlaelleelrarlrrlrrlals.......sperleeslaeHraildAirar 110 
                  + ++a+    +  ++++e+++++dr++Hr l++ +g+ + +e+++e    +  ++  +l        +++r++ +l+  +++++A+++r
  EPX70959.1  960 KEIKAIS---DeiKNQVEKVVKIDREYHRFLIGPSGSSL-QEIIKECGGTTDKAETARLVsfsngntDEDRNSVVLRGNKQLVEALESR 1044
                  3333333...333578999*****************985.559999999999844444334568999********************98 PP

>> SLBB  SLBB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00012      0.24      17      38 ..     990    1011 ..     989    1021 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00012
                  ETT-BHHHHHHTTT-SBSS... CS
        SLBB   17 pigttlsdlieqaGGltddadl 38  
                  p+g++l+++i+++GG td+a  
  EPX70959.1  990 PSGSSLQEIIKECGGTTDKAET 1011
                  789****************984 PP

>> Seryl_tRNA_N  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1       4.6   9.1e+03      68      85 ..     724     741 ..     721     744 .. 0.63
   2 ?   -2.6   0.0       3.3   6.5e+03       9      95 ..     795     806 ..     784     822 .. 0.49
   3 ?   10.0   0.2   0.00039      0.78      65     101 ..     951     987 ..     937     989 .. 0.90
   4 ?    2.7   0.2     0.071   1.4e+02      67     102 ..    1196    1231 ..    1185    1236 .. 0.72

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 4.6
                   -TCCCCCCCHHHHHHHHH CS
  Seryl_tRNA_N  68 daeeliaevkelkeelka 85 
                   d +++++e+k+l ++ k+
    EPX70959.1 724 DVQRVMNEIKQLVKDAKN 741
                   556667777777666665 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 3.3
                   H-HHHHHHHHCCCTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCTTS-TCCCCCCCHHHHHHHHHHHHHHHHHHH CS
  Seryl_tRNA_N   9 enpeavkeklkkRgedkadvdelleldekrrelqveleelqaerNelskeIgkakkkkedaeeliaevkelkeelkaleaelkelea 95 
                   +n+e++k ++                                                                           ea
    EPX70959.1 795 KNVEETKSRI---------------------------------------------------------------------------EA 806
                   2222222222...........................................................................22 PP

  == domain 3  score: 10.0 bits;  conditional E-value: 0.00039
                   TTS-TCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Seryl_tRNA_N  65 kkedaeeliaevkelkeelkaleaelkeleaelekll 101
                   +ke+ ++ i+e+k++++e+k+  +++ +++ e + +l
    EPX70959.1 951 SKENVQSAIKEIKAISDEIKNQVEKVVKIDREYHRFL 987
                   5799***************************999887 PP

  == domain 4  score: 2.7 bits;  conditional E-value: 0.071
                    S-TCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC CS
  Seryl_tRNA_N   67 edaeeliaevkelkeelkaleaelkeleaeleklll 102 
                    + +  ++   +++ + ++ le++lk+le+e + +l+
    EPX70959.1 1196 KATLTIRGHKENVEKAISSLEKNLKQLEEECTGYLS 1231
                    444555667788899999999999999999988775 PP

>> Secretin_N  Bacterial type II/III secretion system short domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.2       3.7   7.5e+03      31      71 ..     149     196 ..     130     207 .. 0.59
   2 ?   -0.5   0.0      0.87   1.7e+03      17      76 ..     686     735 ..     640     739 .. 0.74
   3 ?   -0.7   0.0      0.99     2e+03      53      74 ..     942     963 ..     940     969 .. 0.82
   4 ?    6.2   0.0    0.0067        13      50      71 ..    1022    1043 ..     986    1051 .. 0.83
   5 ?   -4.1   0.0         9   1.8e+04      56      70 ..    1198    1212 ..    1197    1216 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 3.7
                 ...............SSTT-TTSEEEEETTTTEEEEEECHHHHHHHHH CS
  Secretin_N  31 s.......sgassqsgallgkggrvvadprtNsllvrgspervarirq 71 
                 +       ++++s++ +  ++++ + +d +   l  +g p  va i +
  EPX70959.1 149 NsptsssrTASTSKETDYMTDTLILGPDQQISRLSFTGKPNSVADIVR 196
                 133333455555555555555566666666666666666666666555 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.87
                 HHHHHCCTT.............SSTT-TTSEEEEETTTTEEEEEECHHHHHHHHHHHHHH CS
  Secretin_N  17 iLrellgggggesassgassqsgallgkggrvvadprtNsllvrgspervarirqlikqL 76 
                 +L+++lg          +s ++   + ++++ + d+    ++vrg   +v+r+++ ikqL
  EPX70959.1 686 TLKAILG----------NSEENVVVQLGKVSYRSDSTDDDVYVRGFSNDVQRVMNEIKQL 735
                 4555553..........3444455777777777788888888888888888888888887 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.99
                 TTTEEEEEECHHHHHHHHHHHH CS
  Secretin_N  53 rtNsllvrgspervarirqlik 74 
                 +t s+ vrgs+e+v+ + + ik
  EPX70959.1 942 GTISVSVRGSKENVQSAIKEIK 963
                 577999********99877666 PP

  == domain 4  score: 6.2 bits;  conditional E-value: 0.0067
                  EETTTTEEEEEECHHHHHHHHH CS
  Secretin_N   50 adprtNsllvrgspervarirq 71  
                   d+++Ns+++rg+++ v+ +++
  EPX70959.1 1022 TDEDRNSVVLRGNKQLVEALES 1043
                  69****************9986 PP

  == domain 5  score: -4.1 bits;  conditional E-value: 9
                  EEEEEECHHHHHHHH CS
  Secretin_N   56 sllvrgspervarir 70  
                  +l +rg +e+v+++ 
  EPX70959.1 1198 TLTIRGHKENVEKAI 1212
                  689999999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1295 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1517  (0.0846115); expected 358.6 (0.02)
Passed bias filter:                      775  (0.0432261); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 1.02u 0.31s 00:00:01.33 Elapsed: 00:00:00.51
# Mc/sec: 7612.48
//
Query:       EPX70960.1  [L=452]
Description: ribosome biogenesis protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.2e-36  122.8  13.8    1.9e-30  105.2   0.7    3.4  3  zf-C2H2_2      C2H2 type zinc-finger (2 copies)
    1.1e-11   44.7  27.0    1.2e-05   25.5   2.8    4.8  4  zf-C2H2_jaz    Zinc-finger double-stranded RNA-binding
    6.8e-08   32.7   9.5    5.6e-07   29.7   2.7    4.6  5  zf-met         Zinc-finger of C2H2 type
    5.4e-06   26.8  24.7       0.14   13.1   0.4    5.0  4  zf-C2H2_4      C2H2-type zinc finger
    0.00013   20.7  14.3     0.0047   15.5   0.1    4.0  4  DUF629         Protein of unknown function (DUF629)
     0.0002   21.6  28.0      0.022   15.2   0.8    5.3  5  zf-C2H2        Zinc finger, C2H2 type
      0.002   18.0  26.2        0.1   12.6   1.1    4.5  4  zf-C2H2_6      C2H2-type zinc finger
  ------ inclusion threshold ------
        0.1   12.8   1.5          2    8.6   0.1    2.5  2  PAC4           Proteasome assembly chaperone 4
       0.35   10.8  18.2       0.54   10.2   0.1    4.6  4  zf-LYAR        LYAR-type C2HC zinc finger
       0.75    9.7   8.7        4.3    7.3   0.6    3.6  4  C1_1           Phorbol esters/diacylglycerol binding domain (
        1.9    8.6   9.7         13    5.9   0.1    3.6  4  zf-C2H2_aberr  Aberrant zinc-finger
          2    8.1   5.9         41    3.9   0.1    3.7  3  zf_C2H2_ZHX    Zinc-fingers and homeoboxes C2H2 finger domain
        3.2    7.7  14.3       0.74    9.8   7.1    2.7  3  DUF4674        Domain of unknown function (DUF4674)
          6    6.8   8.0         59    3.6   0.1    3.8  4  HNH_5          HNH endonuclease


Domain annotation for each model (and alignments):
>> zf-C2H2_2  C2H2 type zinc-finger (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.7      0.01        13      50      77 ..       4      31 ..       1      41 [. 0.84
   2 !   19.1   0.7   9.3e-07    0.0012      37      78 ..      56      97 ..      46     112 .. 0.80
   3 !  105.2   0.7   1.4e-33   1.9e-30       2      99 ..     201     297 ..     199     299 .. 0.97

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.01
   zf-C2H2_2 50 kleClyCekefkslealreHmkkkgHck 77
                 ++C +C+  f+s ++ + H k+  H+ 
  EPX70960.1  4 AFSCTTCHVAFHSADSQKVHWKSDWHHY 31
                579******************9998865 PP

  == domain 2  score: 19.1 bits;  conditional E-value: 9.3e-07
   zf-C2H2_2 37 eglleylrekieekleClyCekefkslealreHmkkkgHcki 78
                ++  e +++k e + eC yC+k+f s  a+ +H+++k+H++ 
  EPX70960.1 56 QKHNEAVQKKAEFYRECNYCNKNFYSEGAYSSHLASKKHREN 97
                555567888888999************************874 PP

  == domain 3  score: 105.2 bits;  conditional E-value: 1.4e-33
   zf-C2H2_2   2 ClfcekkskeveellehmskkhgffipereylvdleglleylrekieekleClyCekefkslealreHmkkkgHckineeeeeekkeiekfydflskd 99 
                 Clfc+ +++++++  +hm+  h++fipere +vd  gl+eyl ek++ +++Cl+C+++fkslea+r+Hm++kgH  i+++++ee+ e+++fydf s +
  EPX70960.1 201 CLFCNSSFSSFDASKKHMKAIHSLFIPEREFVVDEPGLFEYLAEKVSIGYTCLTCNRQFKSLEAVRSHMQQKGHFSIAYDTDEEQLELSDFYDF-SAS 297
                 **********************************************************************************************.655 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   3.1   0.00015      0.19       2      26 ..       5      29 ..       4      29 .. 0.97
   2 !   25.5   2.8   9.1e-09   1.2e-05       3      27 .]      71      95 ..      70      95 .. 0.96
   3 ?    0.5   0.9      0.62   7.9e+02       4      14 ..     201     211 ..     200     219 .. 0.72
   4 !   20.3   0.3     4e-07   0.00051       2      26 ..     250     274 ..     249     275 .. 0.95

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00015
                 CBBTTTTBBBSSHHHHHCCTTSHHH CS
  zf-C2H2_jaz  2 fYCvlCdKyFksenaldnHlkSKkH 26
                 f C +C   F+s+ + + H+kS +H
   EPX70960.1  5 FSCTTCHVAFHSADSQKVHWKSDWH 29
                 88********************999 PP

  == domain 2  score: 25.5 bits;  conditional E-value: 9.1e-09
                 BBTTTTBBBSSHHHHHCCTTSHHHH CS
  zf-C2H2_jaz  3 YCvlCdKyFksenaldnHlkSKkHK 27
                 +C +C+K F se a+  Hl SKkH+
   EPX70960.1 71 ECNYCNKNFYSEGAYSSHLASKKHR 95
                 5***********************7 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.62
                  BTTTTBBBSSH CS
  zf-C2H2_jaz   4 CvlCdKyFkse 14 
                  C  C+  F+s 
   EPX70960.1 201 CLFCNSSFSSF 211
                  99999999985 PP

  == domain 4  score: 20.3 bits;  conditional E-value: 4e-07
                  CBBTTTTBBBSSHHHHHCCTTSHHH CS
  zf-C2H2_jaz   2 fYCvlCdKyFksenaldnHlkSKkH 26 
                  + C +C+++Fks +a + H+  K H
   EPX70960.1 250 YTCLTCNRQFKSLEAVRSHMQQKGH 274
                  78*********************99 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   1.1      0.54     7e+02       1      12 [.       5      16 ..       5      29 .. 0.76
   2 !   29.7   2.7   4.4e-10   5.6e-07       3      25 .]      72      94 ..      68      94 .. 0.93
   3 ?   -1.5   1.2         3   3.9e+03       3      12 ..     201     210 ..     199     210 .. 0.86
   4 ?   -3.0   0.5       8.7   1.1e+04      22      25 .]     214     217 ..     213     217 .. 0.87
   5 !   15.1   0.6   1.8e-05     0.023       1      21 [.     250     270 ..     250     270 .. 0.96

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.54
      zf-met  1 fyCelCnvtfns 12
                f C  C+v f s
  EPX70960.1  5 FSCTTCHVAFHS 16
                78*****98855 PP

  == domain 2  score: 29.7 bits;  conditional E-value: 4.4e-10
      zf-met  3 CelCnvtfnsesqlksHlqGKkH 25
                C+ Cn+ f+se+++ sHl++KkH
  EPX70960.1 72 CNYCNKNFYSEGAYSSHLASKKH 94
                888******************** PP

  == domain 3  score: -1.5 bits;  conditional E-value: 3
      zf-met   3 CelCnvtfns 12 
                 C  Cn +f+s
  EPX70960.1 201 CLFCNSSFSS 210
                 778*****98 PP

  == domain 4  score: -3.0 bits;  conditional E-value: 8.7
      zf-met  22 GKkH 25 
                 +KkH
  EPX70960.1 214 SKKH 217
                 9*** PP

  == domain 5  score: 15.1 bits;  conditional E-value: 1.8e-05
      zf-met   1 fyCelCnvtfnsesqlksHlq 21 
                 ++C  Cn++f+s  + +sH+q
  EPX70960.1 250 YTCLTCNRQFKSLEAVRSHMQ 270
                 89*****************98 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   1.2     0.008        10       1      22 [.       5      26 ..       5      28 .. 0.92
   2 !   12.6   0.2   0.00015      0.19       2      22 ..      71      91 ..      70      93 .. 0.91
   3 !    9.5   0.9    0.0016         2       3      24 .]     201     222 ..     200     222 .. 0.89
   4 !   13.1   0.4   0.00011      0.14       1      22 [.     250     271 ..     250     272 .. 0.93

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.008
   zf-C2H2_4  1 fkCpiCgksFsskkaLlrHlkt 22
                f C+ C+  F+s ++ + H+k+
  EPX70960.1  5 FSCTTCHVAFHSADSQKVHWKS 26
                79*************888**97 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 0.00015
   zf-C2H2_4  2 kCpiCgksFsskkaLlrHlkt 22
                +C +C+k+F s  a+++Hl++
  EPX70960.1 71 ECNYCNKNFYSEGAYSSHLAS 91
                7*****************986 PP

  == domain 3  score: 9.5 bits;  conditional E-value: 0.0016
   zf-C2H2_4   3 CpiCgksFsskkaLlrHlkthH 24 
                 C +C+ sFss +a ++H+k+ H
  EPX70960.1 201 CLFCNSSFSSFDASKKHMKAIH 222
                 99***********555***988 PP

  == domain 4  score: 13.1 bits;  conditional E-value: 0.00011
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlkt 22 
                 ++C  C++ F+s +a+++H+++
  EPX70960.1 250 YTCLTCNRQFKSLEAVRSHMQQ 271
                 89******************85 PP

>> DUF629  Protein of unknown function (DUF629)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.5   1.0     0.004       5.2      57     105 ..       5      53 ..       3      59 .. 0.83
   2 !   15.5   0.1   3.6e-06    0.0047      58     167 ..      71     185 ..      59     197 .. 0.66
   3 ?    1.6   0.3     0.063        81      59      81 ..     201     223 ..     197     233 .. 0.90
   4 !    5.4   0.1    0.0044       5.7      57      79 ..     250     272 ..     243     284 .. 0.90

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.004
      DUF629  57 WvCrtCsekfsdaeeckqHlvqe.Hvaklkpklqkvlpqevdkewaemil 105
                 + C tC+  f +a++ k H  ++ H  +lk+k++ +lp    + +ae+il
  EPX70960.1   5 FSCTTCHVAFHSADSQKVHWKSDwHHYNLKRKVA-SLPPLSADVFAEKIL 53 
                 68*****************986549999***999.566666667888887 PP

  == domain 2  score: 15.5 bits;  conditional E-value: 3.6e-06
      DUF629  58 vCrtCsekfsdaeeckqHlv.qeHvak...lkpklqkvlpqevdkewaemilngsWkPvDtvaAvkliknrlkdqkefveekvaedetedskdkdgw.. 150
                  C  C+++f++   + +Hl  ++H ++   ++ k++k+  ++ d++ +   + +  +PvD +a  + i+n +k   ++   +v+++  ++s+ kd    
  EPX70960.1  71 ECNYCNKNFYSEGAYSSHLAsKKHRENvrkFEIKSRKDSLKQDDTSSITSSTLSMGEPVDESAEEEEIQNLSKRLASES-VSVSDSLRNGSNLKDTSqa 168
                 5999**************97256876633366677777777777777777777789*******9999998877666655.2223333333333444401 PP

      DUF629 151 elkevdskdWPladDee 167
                 +   +++   P ++D e
  EPX70960.1 169 QASASKIPAEPTSEDFE 185
                 23333355667777766 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.063
      DUF629  59 CrtCsekfsdaeeckqHlvqeHv 81 
                 C  C+  fs+++  k+H+   H 
  EPX70960.1 201 CLFCNSSFSSFDASKKHMKAIHS 223
                 99****************99885 PP

  == domain 4  score: 5.4 bits;  conditional E-value: 0.0044
      DUF629  57 WvCrtCsekfsdaeeckqHlvqe 79 
                 ++C tC+++f++ e  ++H+ q+
  EPX70960.1 250 YTCLTCNRQFKSLEAVRSHMQQK 272
                 68******************997 PP

>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   1.8     0.011        14       1      22 [.       5      26 ..       5      29 .. 0.89
   2 !   12.2   0.5   0.00016       0.2       2      22 ..      71      91 ..      71      94 .. 0.89
   3 ?    4.9   0.9     0.032        41       3      23 .]     201     222 ..     200     222 .. 0.93
   4 !   15.2   0.8   1.8e-05     0.022       1      22 [.     250     271 ..     250     274 .. 0.92
   5 ?   -1.6   0.1       3.6   4.6e+03      18      23 .]     418     423 ..     413     424 .. 0.80

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.011
                EEETTTTEEESSHHHHHHHHHC CS
     zf-C2H2  1 ykCpdCgksFkrksnLkrHirt 22
                + C+ C+  F + ++ k+H ++
  EPX70960.1  5 FSCTTCHVAFHSADSQKVHWKS 26
                89*****************987 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 0.00016
                EETTTTEEESSHHHHHHHHHC CS
     zf-C2H2  2 kCpdCgksFkrksnLkrHirt 22
                +C++C+k F +   + +H+ +
  EPX70960.1 71 ECNYCNKNFYSEGAYSSHLAS 91
                5*****************976 PP

  == domain 3  score: 4.9 bits;  conditional E-value: 0.032
                 ETTTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   3 CpdCgksFkrksnLkrHirt.H 23 
                 C  C+ sF++ +  k+H++  H
  EPX70960.1 201 CLFCNSSFSSFDASKKHMKAiH 222
                 899***************9888 PP

  == domain 4  score: 15.2 bits;  conditional E-value: 1.8e-05
                 EEETTTTEEESSHHHHHHHHHC CS
     zf-C2H2   1 ykCpdCgksFkrksnLkrHirt 22 
                 y+C  C++ Fk+ +  ++H++ 
  EPX70960.1 250 YTCLTCNRQFKSLEAVRSHMQQ 271
                 9*******************86 PP

  == domain 5  score: -1.6 bits;  conditional E-value: 3.6
                 HHHHCC CS
     zf-C2H2  18 rHirtH 23 
                 +Hi+tH
  EPX70960.1 418 SHINTH 423
                 688888 PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.9    0.0025       3.2       2      15 ..       5      18 ..       4      19 .. 0.86
   2 !    8.0   1.9    0.0023       2.9       2      23 ..      70      91 ..      69      96 .. 0.76
   3 ?    4.9   1.5     0.022        28       7      24 ..     204     222 ..     201     223 .. 0.85
   4 !   12.6   1.1     8e-05       0.1       2      23 ..     250     271 ..     250     274 .. 0.91

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0025
   zf-C2H2_6  2 heCsvCsksFpslq 15
                + C++C+  F+s +
  EPX70960.1  5 FSCTTCHVAFHSAD 18
                88*********965 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0023
   zf-C2H2_6  2 heCsvCsksFpslqaLggHkks 23
                 eC++C+k F s  a   H++s
  EPX70960.1 70 RECNYCNKNFYSEGAYSSHLAS 91
                69********998777777755 PP

  == domain 3  score: 4.9 bits;  conditional E-value: 0.022
   zf-C2H2_6   7 CsksFpslqaLggHkks.H 24 
                 C+ sF+s++a  +H+k  H
  EPX70960.1 204 CNSSFSSFDASKKHMKAiH 222
                 **********999998756 PP

  == domain 4  score: 12.6 bits;  conditional E-value: 8e-05
   zf-C2H2_6   2 heCsvCsksFpslqaLggHkks 23 
                 + C +C+++F+sl a + H+ +
  EPX70960.1 250 YTCLTCNRQFKSLEAVRSHMQQ 271
                 78*****************965 PP

>> PAC4  Proteasome assembly chaperone 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.3      0.11   1.4e+02      42      68 ..     115     147 ..     103     156 .. 0.66
   2 ?    8.6   0.1    0.0016         2      41      72 ..     166     198 ..     149     206 .. 0.82

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.11
        PAC4  42 ktptisTtLlgdg.s.....deaserlAqrLAr 68 
                 +++++s+tL +++       +e  ++l++rLA+
  EPX70960.1 115 TSSITSSTLSMGEpVdesaeEEEIQNLSKRLAS 147
                 346778888866555233324477888999885 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0016
        PAC4  41 kktptisTtLlgdg.sdeaserlAqrLArRlgk 72 
                 ++ +++++++  ++ s+++++ lA+r +++lg 
  EPX70960.1 166 SQAQASASKIPAEPtSEDFEKELARRVSQKLGL 198
                 466778999999998899*************86 PP

>> zf-LYAR  LYAR-type C2HC zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   1.9     0.017        21       1      18 [.       5      23 ..       5      25 .. 0.84
   2 ?    2.8   0.2     0.084   1.1e+02       6      18 ..      75      88 ..      71      90 .. 0.86
   3 ?    2.3   0.6      0.13   1.6e+02       3      20 ..     201     219 ..     200     221 .. 0.89
   4 ?   10.2   0.1   0.00042      0.54       1      20 [.     250     270 ..     250     270 .. 0.94

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.017
     zf-LYAR  1 fsCiDCsktFdg.deykaH 18
                fsC  C++ F+  d+ k H
  EPX70960.1  5 FSCTTCHVAFHSaDSQKVH 23
                9**********97776666 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.084
     zf-LYAR  6 CsktFdg.deykaH 18
                C+k+F+    y +H
  EPX70960.1 75 CNKNFYSeGAYSSH 88
                ******98899999 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.13
     zf-LYAR   3 CiDCsktFdg.deykaHts 20 
                 C+ C+ +F+  d  k+H +
  EPX70960.1 201 CLFCNSSFSSfDASKKHMK 219
                 899*******999999975 PP

  == domain 4  score: 10.2 bits;  conditional E-value: 0.00042
     zf-LYAR   1 fsCiDCsktFdg.deykaHts 20 
                 ++C+ C+ +F+  + +++H +
  EPX70960.1 250 YTCLTCNRQFKSlEAVRSHMQ 270
                 8***********9******75 PP

>> C1_1  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.6    0.0033       4.3      27      47 ..       3      23 ..       1      28 [. 0.79
   2 ?    2.6   0.1     0.098   1.3e+02      10      23 ..      68      81 ..      62      91 .. 0.72
   3 ?   -2.5   0.1       3.9   4.9e+03      14      21 ..     201     208 ..     196     222 .. 0.66
   4 ?    2.8   0.0     0.084   1.1e+02      23      37 ..     244     258 ..     229     260 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0033
                -EEEETTT--EE-CCCCTTS- CS
        C1_1 27 qglkCswCkllvHkkChekvp 47
                ++++C++C++ +H    +kv+
  EPX70960.1  3 TAFSCTTCHVAFHSADSQKVH 23
                689**********87666655 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.098
                S--B-TTT-SB--S CS
        C1_1 10 qptfCkhCgeflwg 23
                    C++C++ ++ 
  EPX70960.1 68 FYRECNYCNKNFYS 81
                5568******9944 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 3.9
                 -TTT-SB- CS
        C1_1  14 CkhCgefl 21 
                 C  C++++
  EPX70960.1 201 CLFCNSSF 208
                 77788777 PP

  == domain 4  score: 2.8 bits;  conditional E-value: 0.084
                 SSSS-EEEETTT--E CS
        C1_1  23 gkekqglkCswCkll 37 
                 +k + g++C +C++ 
  EPX70960.1 244 EKVSIGYTCLTCNRQ 258
                 47889*******985 PP

>> zf-C2H2_aberr  Aberrant zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       4.1   5.3e+03       7      27 ..       9      29 ..       6      40 .. 0.73
   2 ?    4.3   0.9      0.03        39     130     167 ..      57      94 ..      33      99 .. 0.78
   3 ?    1.8   0.0      0.18   2.4e+02       8      33 ..     204     228 ..     198     236 .. 0.74
   4 ?    5.9   0.1    0.0098        13     147     168 ..     254     275 ..     243     282 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 4.1
  zf-C2H2_aberr  7 aCdlkyssvlglrrhlveykh 27
                   +C++ ++s ++ + h +   h
     EPX70960.1  9 TCHVAFHSADSQKVHWKSDWH 29
                   699999999998888877666 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.03
  zf-C2H2_aberr 130 ikiiDidkkdliyCripGCgkrfkslmaYkYhckkflh 167
                     +   ++kk  +y + + C+k+f s  aY  h    +h
     EPX70960.1  57 KHNEAVQKKAEFYRECNYCNKNFYSEGAYSSHLASKKH 94 
                    444556677889999***************99887777 PP

  == domain 3  score: 1.8 bits;  conditional E-value: 0.18
  zf-C2H2_aberr   8 Cdlkyssvlglrrhlveykhslytns 33 
                    C+  +ss ++ ++h++ + hsl++++
     EPX70960.1 204 CNSSFSSFDASKKHMK-AIHSLFIPE 228
                    7888888888888865.568888776 PP

  == domain 4  score: 5.9 bits;  conditional E-value: 0.0098
  zf-C2H2_aberr 147 GCgkrfkslmaYkYhckkflhs 168
                     C+++fksl a + h ++  h+
     EPX70960.1 254 TCNRQFKSLEAVRSHMQQKGHF 275
                    6**************9987775 PP

>> zf_C2H2_ZHX  Zinc-fingers and homeoboxes C2H2 finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.2      0.13   1.7e+02       3      19 ..       3      19 ..       1      27 [. 0.79
   2 ?    2.7   0.1     0.075        96       7      29 ..     201     223 ..     200     233 .. 0.89
   3 ?    3.9   0.1     0.032        41       5      23 ..     250     268 ..     248     276 .. 0.90

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.13
  zf_C2H2_ZHX  3 PsFvCveCsfsakkfeg 19
                 + F C+ C +   + ++
   EPX70960.1  3 TAFSCTTCHVAFHSADS 19
                 679******98777665 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.075
  zf_C2H2_ZHX   7 CveCsfsakkfegLalHNarsHp 29 
                  C+ C+ s  +f++ ++H    H+
   EPX70960.1 201 CLFCNSSFSSFDASKKHMKAIHS 223
                  9************9999888885 PP

  == domain 3  score: 3.9 bits;  conditional E-value: 0.032
  zf_C2H2_ZHX   5 FvCveCsfsakkfegLalH 23 
                  + C+ C+   k+ e+   H
   EPX70960.1 250 YTCLTCNRQFKSLEAVRSH 268
                  99*********99999888 PP

>> DUF4674  Domain of unknown function (DUF4674)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   7.1   0.00058      0.74      78     165 ..      71     163 ..      56     186 .. 0.69
   2 ?    1.9   0.0      0.16     2e+02      78      98 ..     251     271 ..     240     286 .. 0.83
   3 ?   -3.7   0.2       7.8     1e+04     124     134 ..     418     428 ..     392     443 .. 0.52

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00058
     DUF4674  78 tCkvCnkttkhkgksrsflaplkskeetpksksslktkkkktksskkktk......tsvsksnskgkspaltfrspssgqstsvssskskkkkk 165
                  C+ Cnk+   +g   s+la++k+ e+  k +++  ++  k+ + +++t+       +v++s+++++ ++l  r   s+ ++ + s ++ ++ k
  EPX70960.1  71 ECNYCNKNFYSEGAYSSHLASKKHRENVRKFEIKSRKDSLKQDDTSSITSstlsmgEPVDESAEEEEIQNLSKR-LASESVSVSDSLRNGSNLK 163
                 5**********************999999988888888888877777777564422233333333333444444.4555555444445555444 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.16
     DUF4674  78 tCkvCnkttkhkgksrsflap 98 
                 tC +Cn++ k     rs++++
  EPX70960.1 251 TCLTCNRQFKSLEAVRSHMQQ 271
                 9********998888888775 PP

  == domain 3  score: -3.7 bits;  conditional E-value: 7.8
     DUF4674 124 kktktsvsksn 134
                 ++++t +++++
  EPX70960.1 418 SHINTHQDRQK 428
                 22222222222 PP

>> HNH_5  HNH endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1       3.6   4.6e+03      35      43 ..       6      14 ..       4      23 .. 0.65
   2 ?    3.6   0.1     0.046        59       1      18 [.      72      89 ..      72      92 .. 0.86
   3 ?    2.3   0.1      0.12   1.5e+02       1      18 [.     201     218 ..     201     220 .. 0.90
   4 ?    3.3   0.1     0.059        75      32      45 ..     248     261 ..     244     271 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 3.6
       HNH_5 35 lCkkCNqkk 43
                +C +C+  +
  EPX70960.1  6 SCTTCHVAF 14
                577787665 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.046
       HNH_5  1 CiyCgkeiaekelseeHI 18
                C yC+k+++++ +   H+
  EPX70960.1 72 CNYCNKNFYSEGAYSSHL 89
                99******9999888775 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.12
       HNH_5   1 CiyCgkeiaekelseeHI 18 
                 C +C++++ + ++s+ H+
  EPX70960.1 201 CLFCNSSFSSFDASKKHM 218
                 999**9999999999996 PP

  == domain 4  score: 3.3 bits;  conditional E-value: 0.059
       HNH_5  32 lvtlCkkCNqkkgq 45 
                 ++ +C +CN ++++
  EPX70960.1 248 IGYTCLTCNRQFKS 261
                 56789999999974 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (452 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1116  (0.0622455); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                        20  (0.00111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 3059.56
//
Query:       EPX70961.1  [L=915]
Description: meiotic cohesin complex subunit Rec11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.4e-08   33.0   2.2      1e-07   31.8   0.0    2.8  3  STAG      STAG domain
  ------ inclusion threshold ------
      0.017   15.1   6.0       0.47   10.5   0.0    3.5  3  Cnd1      non-SMC mitotic condensation complex subunit 1
       0.17   12.1   0.0       0.46   10.7   0.0    1.7  1  Flu_M1_C  Influenza Matrix protein (M1) C-terminal domain


Domain annotation for each model (and alignments):
>> STAG  STAG domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.8   0.0   1.7e-11     1e-07      11      85 ..     171     245 ..     162     252 .. 0.92
   2 ?   -1.9   0.0      0.52   3.1e+03      36      49 ..     684     701 ..     649     720 .. 0.58
   3 ?   -4.3   0.1       2.8   1.7e+04      85      99 ..     854     868 ..     848     877 .. 0.59

  Alignments for each domain:
  == domain 1  score: 31.8 bits;  conditional E-value: 1.7e-11
        STAG  11 klkkfrknlveFfeklvesahekglLydeelmenlltwltalSssklRpfRhtaTlialklqtaLvevakelske 85 
                 + k+f++++  ++++l + + ek+ L  ++ me++ +w++++++s+  ++Rht++ i+  l  +L++ +++++ +
  EPX70961.1 171 TGKSFKSKIRFLIDRLTSASIEKDKLSPASYMETIKSWIICMTTSPWLSIRHTSSGISCMLYVSLANALSKIQDD 245
                 5799**********************************************************9999999988765 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.52
        STAG  36 Ly....deelmenlltwl 49 
                 Ly     ++lme+l+ +l
  EPX70961.1 684 LYitsvTDSLMEDLQDFL 701
                 334444444666666655 PP

  == domain 3  score: -4.3 bits;  conditional E-value: 2.8
        STAG  85 eleklqrqleaekkk 99 
                 +l++l++ql++ +++
  EPX70961.1 854 TLKNLSKQLKKGESN 868
                 455666666655543 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   7.9e-05      0.47      29      95 ..     276     344 ..     261     366 .. 0.78
   2 ?    6.9   0.4     0.001       6.1      17      88 ..     349     419 ..     340     456 .. 0.79
   3 ?   -1.3   0.3      0.32   1.9e+03      74     105 ..     767     798 ..     748     870 .. 0.53

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 7.9e-05
        Cnd1  29 rLkDedpyVRktaaivvakL..ilndmvkekgflselaklleDenprVvanalaalteiseksenaiyn 95 
                 r++D+ + +R  +++++ +   +l+   +++  l  l   l+D+++++++ al +++++ ++++++ ++
  EPX70961.1 276 RIRDTRSIIRLECFMAIHECclLLPSHLQDRSTLLYLGWGLSDTDAKIRKFALKIIQQLFRNEQTEGLS 344
                 789999999999999999988899999999999999999999999999999999999998885544333 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.001
        Cnd1  17 nlveylvepLrkrLkDedpyVRktaaivvakLilndmvkekgflselaklleDenprVvanalaalteisek 88 
                 n++e +++++ + ++ + + VR  a+ ++ +L+++++ k+++ +++l  ++  ++++++  +  +++ + ++
  EPX70961.1 349 NFLERFSSRIAEICRYDIESVRAVALQLCFQLLDHQLLKQED-IEMLSLCIFSKKAQIRLPVMKLIMRYCDQ 419
                 7888999999999999999*********************99.9******9999999886666555555555 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 0.32
        Cnd1  74 Vvanalaalteiseksenaiynllpdiiskls 105
                 V++  l++l+e+++  +n+++++  +++   s
  EPX70961.1 767 VRTILLCVLHELNRHCSNEVMENYFSVAMEAS 798
                 45555555666665533444443333332222 PP

>> Flu_M1_C  Influenza Matrix protein (M1) C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   7.7e-05      0.46      39      81 ..     711     755 ..     693     762 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 7.7e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXX CS
    Flu_M1_C  39 sekaeevqklaeelrqnvqvlrslGasqksseGlk..kdllevlk 81 
                 +++ e++ kl  +l+   + +rs+G+s+k++  l+   dlle  k
  EPX70961.1 711 TNHDEKIEKLVTQLKFYCGFIRSIGTSEKDATTLRlvSDLLEICK 755
                 45678899*********************9988643389999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (915 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       838  (0.0467399); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.75u 0.29s 00:00:01.04 Elapsed: 00:00:00.47
# Mc/sec: 5828.04
//
Query:       EPX70962.1  [L=412]
Description: cyclin Cig1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.7e-37  126.6   0.1    8.3e-37  125.8   0.1    1.4  1  Cyclin_N  Cyclin, N-terminal domain
    8.9e-32  109.7   0.1    2.2e-31  108.4   0.1    1.6  1  Cyclin_C  Cyclin, C-terminal domain


Domain annotation for each model (and alignments):
>> Cyclin_N  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.8   0.1   9.3e-41   8.3e-37       1     127 []     163     289 ..     163     289 .. 0.99

  Alignments for each domain:
  == domain 1  score: 125.8 bits;  conditional E-value: 9.3e-41
                 HHHHHHHHHHCHTS-STTCTTCTSSS-HHHHHHHHHHHHHHHHHTT--TTHHHHHHHHHHHHHHHS---CCCHHHHHHHHHHHHHHHHSSS---HHHHH CS
    Cyclin_N   1 dilknlieqelkflpkpdyldqqpelnpemRailidwlvevaekfkltpetlflavnyldRflskksvpkdklqlvgatcLllAaKveeisppkledlv 99 
                 di+ +++e e++  p+p+y++ q+e+++ +R+ l+dw+++v+++f+l petl+l+vn++dRfls+k v+ +k+qlvg+++Ll++ K+eei+pp++ +l 
  EPX70962.1 163 DIFGYMRELEKNLAPSPSYMSIQNEIDWPTRHLLVDWIIQVHQYFRLLPETLYLTVNLIDRFLSTKVVSFQKIQLVGLSALLISFKYEEIHPPTIYHLG 261
                 799************************************************************************************************ PP

                 HHTTTSS-HHHHHHHHHHHHHHTTT--- CS
    Cyclin_N 100 yitdeafteeeilemErliLetLnfdls 127
                  i++++++ ee++++Er++L  L+f+ls
  EPX70962.1 262 KIVEGVYEIEELIRAERYMLMLLKFELS 289
                 *************************985 PP

>> Cyclin_C  Cyclin, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.4   0.1   2.4e-35   2.2e-31       1     116 [.     291     403 ..     291     405 .. 0.96

  Alignments for each domain:
  == domain 1  score: 108.4 bits;  conditional E-value: 2.4e-35
                 --HHHHHHHHHCCSSHT.-HCCHHCHHCHHHHHHCSCCHCCS-HHHHHHHHHHHCCHHHHS--S-HHHHHHC---HHHHHHHHHHHHHHHHHHHGSS-- CS
    Cyclin_C   1 ptplsFlrrflkaadasedselrtlakylleltlldydflsyppSliAaaalllarstlnspewtetlehytgyskedlkpcvelilellssapssklq 99 
                 p p+sFlrr+++a+++  ++++r+lakyl+eltl+d  f++  pS+iAaa+++l++++l++ +wt+++ +y+g++  +l+pc+  i e++ +ap+ +++
  EPX70962.1 291 PGPMSFLRRISRADSY--QYDIRSLAKYLMELTLMDEMFVGGYPSVIAAASYYLSMQMLGYTTWTSHHIYYSGLTARQLEPCALGIMECILDAPN-HHT 386
                 88***********888..778*********************************************************************98888.888 PP

                 HHCCCCTCGGGCCCGGS CS
    Cyclin_C 100 avrrkyssskfhkvstl 116
                 ++++kys  +++++s +
  EPX70962.1 387 SIFQKYSEARMKRISVF 403
                 *************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (412 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.29s 00:00:00.82 Elapsed: 00:00:00.48
# Mc/sec: 2560.41
//
Query:       EPX70963.1  [L=211]
Description: hypothetical protein SOCG_01184 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.9e-54  181.4   0.0    1.1e-53  181.2   0.0    1.0  1  PGP_phosphatase  Mitochondrial PGP phosphatase
    0.00026   21.0   0.0    0.00041   20.4   0.0    1.3  1  Hydrolase_like   HAD-hyrolase-like


Domain annotation for each model (and alignments):
>> PGP_phosphatase  Mitochondrial PGP phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  181.2   0.0   1.3e-57   1.1e-53       2     167 ..       6     178 ..       5     179 .. 0.97

  Alignments for each domain:
  == domain 1  score: 181.2 bits;  conditional E-value: 1.3e-57
  PGP_phosphatase   2 satlavlkllknpslvlPhltvptfrqlpieig......kkkektikavvlDKDnclaapkedkvaeeikekleelrevypeksilivSNsaGs 89 
                      +++ a+++ +k+p+ +lPh+++p+f+++p++i+        + ++i+++vlDKD+c++ p+++++++e  +kl+el++++++++il+vSNs+Gs
       EPX70963.1   6 EGIRAFFHSVKRPRTLLPHAKFPSFTDVPVSISqhlsnaYGRPVDIRGIVLDKDDCITIPNKQNIPNENLKKLRELQNKFGKSNILLVSNSIGS 99 
                      57889999************************99999988999*************************************************** PP

  PGP_phosphatase  90 sd.dkdaekaealekktgipVlrhkekKPgcaeevleyfkerkvveeadeiavvgDRllTdvllanmmGslgvwlrdgv 167
                      ++ d+++++a+ +e++++ipVlrh++ KP c++ev eyf+e ++v+++++++++gDRllTd ++an+mG+++ wl  gv
       EPX70963.1 100 KKqDPTGKDAAYFEDRWEIPVLRHSKLKPLCEQEVWEYFQEFTQVQNPSQLLFIGDRLLTDSTMANRMGAWSLWLCVGV 178
                      *99***********************************************************************99888 PP

>> Hydrolase_like  HAD-hyrolase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0   4.5e-08   0.00041      19      54 ..     145     180 ..     125     193 .. 0.84

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 4.5e-08
                     --GGGEEEEES-TTTHHHHHHHCT-EEEEESSSSS- CS
  Hydrolase_like  19 sdpeevlmiGDrlatDiagAnnaGwksvLVltGvtr 54 
                      +p++ l+iGDrl tD  +An++G+ s+    Gv +
      EPX70963.1 145 QNPSQLLFIGDRLLTDSTMANRMGAWSLWLCVGVQG 180
                     46899*******************999887777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       535  (0.0298399); expected 358.6 (0.02)
Passed bias filter:                      501  (0.0279436); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.45
# Mc/sec: 1419.49
//
Query:       EPX70964.1  [L=190]
Description: iron-sulfur protein I [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.5e-20   71.6   0.0    7.7e-20   71.2   0.0    1.2  1  Fe-S_biosyn  Iron-sulphur cluster biosynthesis


Domain annotation for each model (and alignments):
>> Fe-S_biosyn  Iron-sulphur cluster biosynthesis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.2   0.0   4.3e-24   7.7e-20       3     111 .]      83     184 ..      81     184 .. 0.96

  Alignments for each domain:
  == domain 1  score: 71.2 bits;  conditional E-value: 4.3e-24
                  EEE-HHHHHHHHHHHHCTTEC...EEEEEECCTSCCGGS.TT.EEEEEEEEESSTSTTTEEEEEETTEEEEEEGGGHHHS.TTEEEEEEEETTEEEEE CS
  Fe-S_biosyn   3 itlteaAaeklkkllaedkke...lrLdvddgggpyskggCsiggkyslvlvdeedeeydevlesnggkvyvksyslvfldeglvldfvedlgtlgLk 97 
                  i+lt +A++ l+++l+e + +   lr++v+++g       C+ g+ ysl++++++ e++dev+e++g++++v +++l ++  g v+d+++d+ ++++ 
   EPX70964.1  83 IKLTSDAVNNLRSMLDEPSMKdklLRIGVKQKG-------CA-GQAYSLEYIEQP-EKFDEVVEQDGIRIIVARRALLQI-IGSVMDYRDDELQSRFV 170
                  99***************666669**********.......**.************.************************.9**************** PP

                  EETCCEEEEEEEEE CS
  Fe-S_biosyn  98 sdngilddnvglgk 111
                  ++n+++++++g+g+
   EPX70964.1 171 FTNPNIKSTCGCGE 184
                  ************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       443  (0.0247086); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.30s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 1242.43
//
Query:       EPX70965.1  [L=335]
Description: Smc5-6 complex non-SMC subunit Nse3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.1e-37  126.8   0.0    1.6e-36  126.0   0.0    1.4  1  MAGE         MAGE family
  ------ inclusion threshold ------
       0.04   14.0   0.7      0.093   12.9   0.6    1.6  1  BLOC1S3      Biogenesis of lysosome-related organelles comple
       0.15   12.6   8.0      0.078   13.6   5.1    1.9  2  SPT6_acidic  Acidic N-terminal SPT6


Domain annotation for each model (and alignments):
>> MAGE  MAGE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.0   0.0   2.7e-40   1.6e-36       1     212 [.     103     296 ..     103     297 .. 0.92

  Alignments for each domain:
  == domain 1  score: 126.0 bits;  conditional E-value: 2.7e-40
        MAGE   1 LVRlalacesqrtpIrRedikkkvlgk.qgkrafkkvfeeaqkqLrdvFGmeLvelpskeekkstessqekraaekakskkstrsksyiLvstlpeeyr 98 
                 +VRla++++s++++++R+++ ++++ + +++  f+ ++eea++qLr vFG++Lv +   +++k+++ sq +++ + ++s++s+  k+++L s+l++ey 
  EPX70965.1 103 IVRLAICSQSSHQALSRKEVIQRAFPQgSSRSLFQPALEEANHQLRTVFGFQLVLVNPSDRTKEMAISQLRKQHTSNSSSSSNLPKYWVLKSSLSPEYC 201
                 69***********************99656899*************************9999999999999888888899******************* PP

        MAGE  99 eaaaiiapskiesealeekeaaykGiltvvlslillsggsiseqeLekyLkrlgldenstskeitklklkldelLkklvkqgYlvrekeskasdeeeek 197
                 +   +++ s +++        ++ G+l++ +sl+++s+g ++e +L+++L  l  +++ t++     +l+ld+ L+ lv+ gYl+r+k+     +++++
  EPX70965.1 202 NDQRLVPDSIADT--------SFLGFLMLTVSLVAVSHGYLRELDLKSHLDTLLSSDT-TPF-----QLDLDRSLNLLVRFGYLDRVKD-----DTHNQ 281
                 7766666665554........8******************************977766.445.....79********************.....89*** PP

        MAGE 198 veyrvGpRakvEige 212
                 + y vG+R+  Eig+
  EPX70965.1 282 FVYYVGSRSDTEIGK 296
                 *************98 PP

>> BLOC1S3  Biogenesis of lysosome-related organelles complex 1 subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.6   1.6e-05     0.093      42     106 ..      84     148 ..      33     152 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.6e-05
     BLOC1S3  42 dedeaesqsaeqqqeivekdlpplvvvrds..saveevespaskqsqsgkydtLLhqKLrEsNarLr 106
                 de ++ ++  +++ +++ +++ +l ++++s  +a +++ ++++++ ++g +++L +  L+E+N +Lr
  EPX70965.1  84 DELDKGETD-SMNFQMLVRNIVRLAICSQSshQALSRK-EVIQRAFPQGSSRSLFQPALEEANHQLR 148
                 334444444.477899999******9999433555555.67777889*******************8 PP

>> SPT6_acidic  Acidic N-terminal SPT6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   5.1   1.3e-05     0.078      10      60 ..      33      86 ..      30      93 .. 0.52
   2 ?   -2.7   0.0       1.5   9.2e+03      14      27 ..     313     326 ..     310     333 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.3e-05
  SPT6_acidic 10 eeeerkvregFIvdddeeeeeeeesee....eeekkrrkkkkkrreeeedaLded 60
                 ++ee  + eg+I+dd e  +++ + ++    ++++++r+kk ++ ++ ++aLde 
   EPX70965.1 33 DDEEGSESEGYIDDDLESPNDDPSIRQesgrTSSDRNRRKK-SKPNAGSKALDEL 86
                 344455689****9854433333222123423333334443.3333444677764 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1.5
  SPT6_acidic  14 rkvregFIvdddee 27 
                   +v+ gF +d  e+
   EPX70965.1 313 DEVLSGFTDDKSEN 326
                  57888999888665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (335 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       726  (0.0404931); expected 358.6 (0.02)
Passed bias filter:                      488  (0.0272185); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.22s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2437.73
//
Query:       EPX70966.1  [L=1539]
Description: myosin II heavy chain [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   5.5e-272  904.0   5.6   5.5e-272  904.0   5.6    2.2  2  Myosin_head   Myosin head (motor domain)
    5.8e-09   35.6   0.5    1.6e-08   34.2   0.5    1.8  1  Myosin_N      Myosin N-terminal SH3-like domain
  ------ inclusion threshold ------
      0.032   14.5   4.5       0.11   12.8   0.0    3.8  4  AAA_22        AAA domain


Domain annotation for each model (and alignments):
>> Myosin_head  Myosin head (motor domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  904.0   5.6  9.2e-276  5.5e-272       1     677 []      79     744 ..      79     744 .. 0.98
   2 ?   -6.0   5.2         2   1.2e+04     514     586 ..     978    1049 ..     883    1139 .. 0.65

  Alignments for each domain:
  == domain 1  score: 904.0 bits;  conditional E-value: 9.2e-276
                  -SBGCGSSS-SHHHHHHHHHHHHHTT--EEEETTEEEEE--SS--STSSHHHHHHHTTS-GGGSSSSHHHHHHHHHHHHHHHTSEEEEEEESSTTSSH CS
  Myosin_head   1 vedlveLsllneasvlenlkkRykkdliYtysglvlvavnPykklkiysedvikaykgkkreelpPHifaiadeayrslledkenqsilisGEsGAGK 98 
                  v+d++eL+ lne+sv  nl++Ry +d+iYtysgl+lvavnPy++l+iy +d+i+ yk+k++e   PH+faiad ay++lle+kenqsil++GEsGAGK
   EPX70966.1  79 VNDMAELTNLNEPSVTYNLEQRYLSDQIYTYSGLFLVAVNPYRRLPIYGKDMIQLYKDKSQERKLPHVFAIADLAYNNLLENKENQSILVTGESGAGK 176
                  68************************************************************************************************ PP

                  HHHHHHHHHHHHHHSSSSSCTCTTHHHHHHHHHHHHHHHHHEEEESSETTEESSEEEEEEEEETTSSEEEEEEEEECE-GGGGT---TT--SBHHHHH CS
  Myosin_head  99 teatKkvlqylasvaeskekveeeeleekilqsnPilEafGnAktvrndnssRFGKfieiefdakgkiagakietYLLEksRvvkqakeERnyHiFYq 196
                  te+tK+++qyla+va++ + ++ e+lee+il++nP+lEafGnAktvrn+nssRFGKfi++ef+ +g+ia a+ie+YLLEksRvv+q++eERnyHiFYq
   EPX70966.1 177 TENTKRIIQYLAAVASNPNVISGEQLEEQILKTNPVLEAFGNAKTVRNNNSSRFGKFIKVEFSVSGEIANASIEWYLLEKSRVVHQSSEERNYHIFYQ 274
                  ************************************************************************************************** PP

                  HHHCSTHHHHHHTT--.TCCGSTTTTTTSSSSBTTS-HHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHCTSSEEEECTTSSEEESSHHHHHHHH CS
  Myosin_head 197 llagaseeekkelkle.dvkdyaylsqsgeltvdgiddseefketkkaldilglseeeqkeifrivaailhlGniefkkeakdeqavledeeklekaa 293
                  ll+ga++ ++k+l l+ +++dy+yl++ ++lt++g++d+eefk + ++++ilg++e+e+ ++f+i+++ilh+Gni++  ++++  a l++ ++++k +
   EPX70966.1 275 LLNGADPALRKKLLLSnEFNDYEYLKK-SSLTIPGVNDAEEFKGLLSSFKILGFTEKEIFDMFSIISIILHIGNIAIGADRSGV-ARLTNMDDVDKLC 370
                  ****************899********.69***************************************************996.88999999***** PP

                  HHHTS-HHHHHHHHHSEEEEETTEEEEEE-BHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS-S-SEEEEEEEEE-B---SSB-HHHHHHHHHH CS
  Myosin_head 294 ellgvdaeelekalvkrriktgkevvskalnveqaevardalakaiyerlFdwlverinkslekkkeekksfiGvLDiaGFEifeknsFEqlcinyvn 391
                  +llgv+ e +++ l+++ri++g+e+v++a + e++  +++alakaiyer F wlv+rin+++++++ ++++fiG+LDiaGFEife+nsFEqlciny+n
   EPX70966.1 371 HLLGVSPELFSQNLIRPRIRAGHEWVVSARSQEHVISSVEALAKAIYERNFGWLVKRINSAISRNT-SSNTFIGILDIAGFEIFETNSFEQLCINYTN 467
                  ****************************************************************99.99***************************** PP

                  HHHHHHHHHHHCHHHHHHHHHTTSSGCGS-GGGCCHHHHHHHHS.SSTSHHHHHHHHHTSTTS-HHHHHHHHHHHH.TTSTTEEETTSTTTTTEEEEE CS
  Myosin_head 392 EkLqqlFnelvlklEqeeYvrEgiewkfidfgldnqaiidLiek.kplGilslLdeecllpkatdetfleklvkaf.skhakfeksrlkkgeakFiik 487
                  E+Lqq+Fn+++++lEqeeY++E+i+w+f+dfg d+q++idLiek +p+Gils Ldeec++pkatd+tf++kl   + +k++k++  +     + Fi++
   EPX70966.1 468 ERLQQFFNHHMFVLEQEEYMKEEIKWDFVDFGHDLQPTIDLIEKsNPIGILSCLDEECVMPKATDTTFVSKLDALWrDKSPKYKPFK--FAGSGFILT 563
                  ********************************************99******************************99999**7766..6999***** PP

                  ETTCEEEEE-TTHHHHHH----HHHHHHHHTSSSHHHHHHCCSHCHB--.........CSSSECCCCCSBHHHHHHHHHHHHHHHHCTSEEEEEEEE- CS
  Myosin_head 488 HyAgkveYevegfleKnkDtlnedlvellksskkkllaelfkeeekeakaeakksekkkkkkkkkkkfktvgskfkeslaeLmktlestnphfvRCik 585
                  HyA +v Y++eg+leKn D+lne++ +l+ +s++k +aelf+++++        + k+ + +++k+ f+tv++++ke+l++Lm+++++t+phf+RCi+
   EPX70966.1 564 HYAADVPYSTEGWLEKNSDPLNENIAKLFAHSTNKHIAELFSDYQE-------VETKTVRGRTRKALFRTVAQRHKEQLNQLMNQFNTTQPHFIRCII 654
                  *******************************************775.......5567889999999******************************** PP

                  SSSS--TT---HHHHHHHHHHTTHHHHHHHHHHSSSEEEEHHHHHHHHGGGSTTSS-SS.SSSHHHHHHHHHHHTTS-GCGEEECSSEEEET CS
  Myosin_head 586 pnekkkakkldeslvleqlrclGvlegirirraGfpnRitfeefvqrYkllakkelkkllkedakkaveailkeleldkeeykiGktKiFfr 677
                  pne+kk+++++++lvl+qlrc+Gvlegiri+raGfpnR+ f++f+ rY+++++     +   ++++a+  il+++ l++++++iG +KiFf+
   EPX70966.1 655 PNEEKKSHSFNRALVLDQLRCNGVLEGIRITRAGFPNRMPFNDFRLRYEMMVNLPK--DNYIESRRASLLILQQMGLSEDQFRIGVSKIFFK 744
                  **************************************************998765..44589999*************************8 PP

  == domain 2  score: -6.0 bits;  conditional E-value: 2
                   HHHHTSSSHHHHHHCCSHCHB--.........CSSSECCCCCSBHHHHHHHHHHHHHHHHCTSEEEEEEEE-S CS
  Myosin_head  514 ellksskkkllaelfkeeekeakaeakksekkkkkkkkkkkfktvgskfkeslaeLmktlestnphfvRCikp 586 
                   +  k+s+++ l++l +++ek+  + ++  +k+++ +++ +kfk +++   e la+ m+t +++n   +R + +
   EPX70966.1  978 SKEKTSTDEGLTKLREDNEKKGLELSSLMDKNSTLNRELQKFKEMSKSLEERLANEMSTTKNMNFT-LRSVSS 1049
                   333455555566666665555555566666666666677777777777777777777665554432.455544 PP

>> Myosin_N  Myosin N-terminal SH3-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   0.5   2.7e-12   1.6e-08       1      33 [.      24      57 ..      24      63 .. 0.85

  Alignments for each domain:
  == domain 1  score: 34.2 bits;  conditional E-value: 2.7e-12
                SEEEEETTSTTS-EEEEEEEEES.SEEEEEETTS CS
    Myosin_N  1 KklVWVpDpkegyvkGeIkeeeG.dkvtVetedG 33
                K++VW+ +p+ ++ k++Ikee + +k++V+ ++ 
  EPX70966.1 24 KRWVWISHPETAFTKAWIKEELDdGKYVVRYNNS 57
                9******************7766599***99665 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       2.4   1.5e+04      93     117 ..      61      87 ..      51      94 .. 0.67
   2 ?   12.8   0.0   1.8e-05      0.11       4      34 ..     162     192 ..     159     270 .. 0.87
   3 ?   -1.6   0.0       0.5     3e+03     106     131 ..     632     655 ..     607     671 .. 0.65
   4 ?   -0.9   1.4      0.31   1.9e+03      38      70 ..    1345    1378 ..    1280    1396 .. 0.58

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 2.4
      AAA_22  93 elliiDEaqhlr..seealeeLrslln 117
                 +++  DE+q l+  + + +++  +l n
  EPX70966.1  61 SVVGHDEIQPLNpsRFDRVNDMAELTN 87 
                 666779*****8754666666655555 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 1.8e-05
      AAA_22   4 tagilvvtGesGtGKTtllrrlleqldeeak 34 
                 + ++++vtGesG+GKT   +r+ + l ++a+
  EPX70966.1 162 ENQSILVTGESGAGKTENTKRIIQYLAAVAS 192
                 6799***************999987766554 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 0.5
      AAA_22 106 eealeeLrsllnlsrkgvqliLvGtp 131
                 +e+l++L + +n  +++ ++i ++ p
  EPX70966.1 632 KEQLNQLMNQFN--TTQPHFIRCIIP 655
                 556666655555..655555555444 PP

  == domain 4  score: -0.9 bits;  conditional E-value: 0.31
      AAA_22   38 erpevvfvtlpsst.sskdllrellralglelka 70  
                   ++e+ + +l++s+ ++k++++el +a++l++k+
  EPX70966.1 1345 SDVEYSKNKLTESElKLKEVRKELNSAIELNKKK 1378
                  3333334445555566666666666666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1539 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2337  (0.130347); expected 358.6 (0.02)
Passed bias filter:                      532  (0.0296726); expected 358.6 (0.02)
Passed Vit filter:                       118  (0.00658152); expected 17.9 (0.001)
Passed Fwd filter:                        45  (0.0025099); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 2.03u 0.36s 00:00:02.38 Elapsed: 00:00:00.69
# Mc/sec: 6768.73
//
Query:       EPX70967.1  [L=1285]
Description: RhoGEF Rgf3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-44  151.2   0.0    7.1e-44  150.5   0.0    1.3  1  CNH       CNH domain
    2.8e-34  119.0   0.1    4.9e-34  118.2   0.1    1.4  1  RhoGEF    RhoGEF domain
    2.1e-15   57.0   0.0    6.1e-15   55.5   0.0    1.8  1  PH_5      Pleckstrin homology domain
  ------ inclusion threshold ------
      0.013   16.0   0.2       0.12   13.0   0.0    2.7  2  PH        PH domain
        0.1   12.4   0.0        9.4    6.1   0.0    2.5  2  PH_16     PH domain


Domain annotation for each model (and alignments):
>> CNH  CNH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.5   0.0     2e-47   7.1e-44       6     274 ..     955    1246 ..     951    1247 .. 0.92

  Alignments for each domain:
  == domain 1  score: 150.5 bits;  conditional E-value: 2e-47
         CNH    6 ggqrlllGteeGlyllnl...sdeskpvkieklssvtqlaVleelnlllllsdkqLyvydlsaLeekeeesqlakkksenltqklpetkgchffa.. 97  
                  g+ ++ ++t +G++l  +   s+ ++++ki++  +vtq+  lee+++ll l d++ y+y+ls + e+ + +        ++   +  +++++ff+  
  EPX70967.1  955 GKLSICISTTTGVFLGFFggnSNIREWRKISSHRRVTQIGFLEEFDCLLELRDRSMYAYRLSRVIESGTLE-------PKVAIPVGNSHNISFFKis 1044
                  566899************99999999999999999********************************9333.......3357899**********99 PP

         CNH   98 ...irngyskekfLvvavks.....kivllewneplkkfk..............kklrefqvpaevfsisvlkpklcvgvakgFelvnldegaaesl 172 
                       +  ++e++L++ ++      +i+++e++  l  ++              + l+ef v a ++si+++k++++++ +kg+++v+ld + a s+
  EPX70967.1 1045 kltEGASLKRERTLIFFKQGsgnssSIHCCEPVVGLGHHNqkaynfklknvssfRTLEEFRVLADCYSINCFKYSIAISRQKGIDIVRLDPKLAVSF 1141
                  986666778999****99999*************99999999************************************************999999* PP

         CNH  173 ldpedns.ldfaarkenlkplaviqised.efLlcydefavyvdlqGr.rsrdseleWegkPesvaclepyllafhknfieirsvetgelvqeisgk 266 
                  ++p+       ++r ++ kpl+v+++++   f +cy++ a +v+ +G   ++d +l W g P+s+ac e+yl+af+++fiei++ ++++ vq+i+g+
  EPX70967.1 1142 PSPSVLAdPLYRSRLNSSKPLGVFRVHDPaIFACCYQTGALFVNGEGSlIKKDAWLPWIGRPNSIACHEGYLMAFSDDFIEIWNSRSMKQVQIIQGN 1238
                  9888777877899**************844999***************7777********************************************* PP

         CNH  267 klrfllsg 274 
                  ++r+ +s+
  EPX70967.1 1239 NIRLHSSN 1246
                  ***98887 PP

>> RhoGEF  RhoGEF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.2   0.1   1.4e-37   4.9e-34       2     181 ..     483     666 ..     482     667 .. 0.92

  Alignments for each domain:
  == domain 1  score: 118.2 bits;  conditional E-value: 1.4e-37
                 HHHHHHHHHHHHHHHHHHHHHTHCCCHHCT.....CCHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHH.HHHTTSS-S-SHHHHHHHHSTHHH.HHHHH CS
      RhoGEF   2 ikElleTErsYvrdLkvlvevylkplsele.....vlseeeikiiFsnieeilelhrsflleeLeerlkeseeqkeaqsigdvflkfadkfkk.YseYc 94 
                 i+El+  E +Yv dL +l e +++ + +++     +  ++ i+++F+n+e+i +lh++f+l++L  r   + +    + igd++l++ +  k  Y +Y 
  EPX70967.1 483 IHELICKESDYVADLHTLAELFRDGIVQENsivpsNRVADFIQSVFGNVESIRQLHSQFILPQLIIRE--RLQGPVVSLIGDILLEWVHLAKTsYINYA 579
                 89*********************55555555666677788999*************9999**998888..689999************887756***** PP

                 HCHHHHHHHHHHHHHHHHHHHHHHHHHHTSGGGTT--HHHHTTHHHHHHHHHHHHHHHHHHTS-TTSHHHHHHHHHHHHHHHHHHHH CS
      RhoGEF  95 snypnalkllkelskknkkfkafleeaeerpecskldLeslLikPvqRlprYpLLLkellkntpeshpdyealkkaleaikevasei 181
                 +++p a +++k + ++n +f+++l +++++p+c++ld++++L +P qRl rY L ++++lk+t++++ dy+ +++a ++++  ++e+
  EPX70967.1 580 KQFPLADETYKLECQRNTYFARWLASCRSDPRCRRLDFQHFLQRPTQRLQRYTLEWDTILKHTDPTSWDYQLISQAEKELRATCEEC 666
                 *******************************************************************************99988877 PP

>> PH_5  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.5   0.0   1.7e-18   6.1e-15       3     132 ..     707     862 ..     705     865 .. 0.81

  Alignments for each domain:
  == domain 1  score: 55.5 bits;  conditional E-value: 1.7e-18
        PH_5   3 fkgtlkkketsksesadiqvyLfDhalLlvkiktvnkreqyk..vyrrPiPLeLLvvs.eaedvpkkkgl..................kkrks...... 74 
                 f+g++ +k+ s+ +  +i+++L+D+++++ k++  ++++ +k  v +rPiP+ LLv++  +e+ +++++                   +krks      
  EPX70967.1 707 FEGPVFRKSESRLDWIEIHIFLLDNYFIMAKARRDKRTNSMKylVSKRPIPMDLLVLNpLIEEWNSRSSKflgtlasnfpyegslnarSKRKSrlnldi 805
                 8899999999998888*****************9999988775589************55677777766689999999999988877656665787776 PP

        PH_5  75 sslikkkksssnlvlvpekaekkkgyaitflhlGkkgyeltLyastlaarqkwlekie 132
                 ++  ++ + ++++  ++ + ek + y++t++hlG  +++ tLy ++ + r+ w++ki+
  EPX70967.1 806 RNDYNSDRMNEDS-WNNLTPEKPHFYPFTVRHLGGLSSTYTLYTESSQLRKLWMDKIN 862
                 3333333333333.46667889999********************************7 PP

>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.92   3.3e+03       3      42 ..     707     742 ..     705     758 .. 0.78
   2 ?   13.0   0.0   3.2e-05      0.12      61     103 ..     823     864 ..     792     866 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.92
                 EEEEEEEETSSSSCSEEEEEEEEETTEEEEESSTTCTTES CS
          PH   3 keGwLlkkgsgkkkswkkrwfvLkdsellyykndksekdk 42 
                  eG +++k++ +   w + +++L d+ +++ k++   +dk
  EPX70967.1 707 FEGPVFRKSESRL-DWIEIHIFLLDNYFIMAKAR---RDK 742
                 6889899999988.99999999999999999999...332 PP

  == domain 2  score: 13.0 bits;  conditional E-value: 3.2e-05
                 TTSSSSTSEEEEEESTSSS.TEEEEEEESSHHHHHHHHHHHHHH CS
          PH  61 tedpkrkfcfelriverng.srtyllqasseeerkeWikaiqsa 103
                 t+++++ + f +r+   +g s+ty+l+++s++ rk W+  i+ a
  EPX70967.1 823 TPEKPHFYPFTVRHL--GGlSSTYTLYTESSQLRKLWMDKINFA 864
                 455666666777666..8888********************965 PP

>> PH_16  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0    0.0026       9.4       9      53 ..     695     742 ..     688     768 .. 0.79
   2 ?    3.4   0.0     0.018        63     101     121 ..     842     862 ..     832     865 .. 0.88

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0026
       PH_16   9 kldlt..krkLiheGpltwrlakg.klvdlhvvlledvlvllqkqdek 53 
                 +l+l+  +r+  +eGp+  +++++   +++h+ ll++  ++ + + +k
  EPX70967.1 695 NLELRdpEREFFFEGPVFRKSESRlDWIEIHIFLLDNYFIMAKARRDK 742
                 5667677899*******9998876578************999855444 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.018
       PH_16 101 qmyelvastkeerktWlklis 121
                   y l++++++ rk W+  i+
  EPX70967.1 842 STYTLYTESSQLRKLWMDKIN 862
                 579**************9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1285 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       604  (0.0336884); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.79u 0.32s 00:00:01.11 Elapsed: 00:00:00.47
# Mc/sec: 8221.67
//
Query:       EPX70968.1  [L=1325]
Description: RhoGEF for Rho1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-82  276.4   0.0    4.4e-82  275.8   0.0    1.3  1  CNH       CNH domain
    2.3e-36  124.8   0.6    6.6e-36  123.4   0.0    2.2  2  PH_5      Pleckstrin homology domain
    6.5e-33  114.5   0.0    1.5e-32  113.3   0.0    1.7  1  RhoGEF    RhoGEF domain
    1.3e-12   47.5   0.1    3.7e-12   46.1   0.1    1.8  2  DEP       Domain found in Dishevelled, Egl-10, and Pleckstrin


Domain annotation for each model (and alignments):
>> CNH  CNH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  275.8   0.0   9.8e-86   4.4e-82       4     274 ..     992    1277 ..     989    1278 .. 0.97

  Alignments for each domain:
  == domain 1  score: 275.8 bits;  conditional E-value: 9.8e-86
         CNH    4 itggqrlllGteeGlyllnl....sdeskpvkieklssvtqlaVleelnlllllsdkqLyvydlsaLeekeeesqlakkksenltqklpetkgchff 96  
                  +++g+rll+Gt++G+y++ +      ++kpv+  ++s+v ql+V+ee+nlllllsdk+Ly+y+l+ +e++ ++     +k+       + + +++ff
  EPX70968.1  992 YDSGRRLLYGTDYGVYVSLRksntPLQFKPVRALNMSNVFQLEVIEEFNLLLLLSDKTLYSYPLEMIEAEPNQA----PKK-----PRKICGHTTFF 1079
                  789*****************98888899*****************************************99554....454.....567799***** PP

         CNH   97 airngyskekfLvvavks.....kivllewneplkkfk................kklrefqvpaevfsisvlkpklcvgvakgFelvnldegaaesl 172 
                  +  +g + + +Lv+avks     +i+++e+++ l k k                + ++e+++p+e +s+++lk+klcvg+++gFe+v+ld+ +++sl
  EPX70968.1 1080 R--VGICLGQVLVCAVKSsvlsaTIKVFEPVPHLAKGKnlpsfkkllavnqdplRIIKELYIPTESTSVHFLKNKLCVGCTRGFEVVSLDNLETQSL 1174
                  *..********************************************************************************************** PP

         CNH  173 ldpednsldfaarkenlkplaviqisedefLlcydefavyvdlqGrrsr.dseleWegkPesvaclepyllafhknfieirsvetgelvqeisgkkl 268 
                  ldp+d+sl+f++rken+kp+a+++++ +efLlcy++fa++v++ G+rsr ++ + Weg+P+++a+++py+laf++ fie+r+vet+elv++i+++++
  EPX70968.1 1175 LDPADTSLEFVERKENVKPIAIYRMNGGEFLLCYTQFAFFVNRDGWRSRsTWFVVWEGTPQNFALSYPYILAFEPSFIEVRHVETSELVHVIPANNI 1271
                  ************************************************************************************************* PP

         CNH  269 rfllsg 274 
                  r+l++g
  EPX70968.1 1272 RLLADG 1277
                  **9876 PP

>> PH_5  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.2       2.2   9.8e+03      70     109 ..     350     388 ..     337     391 .. 0.45
   2 !  123.4   0.0   1.5e-39   6.6e-36       1     135 []     832     960 ..     832     960 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 2.2
        PH_5  70 kkrkssslikkkksssnlvlvpekaekkkgyaitflhlGk 109
                 ++ +s+s++ ++ +ss+++ + +++++++  +  f+  G+
  EPX70968.1 350 AEATSRSYTLSSYKSSESA-TISESSTHPSSPTAFTPSGR 388
                 2333444433333333332.33445556666666666665 PP

  == domain 2  score: 123.4 bits;  conditional E-value: 1.5e-39
        PH_5   1 lifkgtlkkketsksesa...diqvyLfDhalLlvkiktvnkreqykvyrrPiPLeLLvvseaedvpkkkglkkrkssslikkkksssnlvlvpekaek 96 
                 lifkg+lkk++t++s  +   d+ ++LfDhalL+vk+k++nkre ykvy+rPiPL LL+   +++  ++          +++k++ ++ +  v++ + +
  EPX70968.1 832 LIFKGPLKKRSTTSSALDsnsDVSMFLFDHALLIVKPKIINKREIYKVYQRPIPLLLLQQYLVDEAGTR--------IPYSNKSQLAAVS-KVANGKPP 921
                 89**********998655668*********************************************999........3333333333333.23455678 PP

        PH_5  97 kkgyaitflhlGkkgyeltLyastlaarqkwlekiekqq 135
                  +  +++++ lG++gye+tL+ast+++r+kwle+i++qq
  EPX70968.1 922 GRLHPFSLQLLGRRGYEITLFASTEVGRDKWLEHIDHQQ 960
                 999**********************************98 PP

>> RhoGEF  RhoGEF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.3   0.0   3.3e-36   1.5e-32       1     182 []     613     794 ..     613     794 .. 0.95

  Alignments for each domain:
  == domain 1  score: 113.3 bits;  conditional E-value: 3.3e-36
                 HHHHHHHHHHHHHHHHHHHHHHTHCCCHHCT....CCHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHH.HHHTTSS-S-SHHHHHHHHSTHHHHHHHHH CS
      RhoGEF   1 vikElleTErsYvrdLkvlvevylkplsele....vlseeeikiiFsnieeilelhrsflleeLeerlkeseeqkeaqsigdvflkfadkfkkYseYcs 95 
                 vi E++ TEr++v+dL++l ++++kpl  ++      +e+ i+++F n  e+ +++ s+l e+L  r+   +++   ++i+dvfl++ +kf+ +  Y +
  EPX70968.1 613 VICEVIYTERDFVKDLEYLRDYWIKPLWASNciheRKKEKFIRTVFLNALEVQAVN-SKLAEALTRRQ---NYKPIVDNIADVFLEHVPKFEPFIRYGA 707
                 799*********************9999888777777788888*************.*******9999...78888*********************** PP

                 CHHHHHHHHHHHHHHHHHHHHHHHHHHTSGGGTT--HHHHTTHHHHHHHHHHHHHHHHHHTS-TTSHHHHHHHHHHHHHHHHHHHHH CS
      RhoGEF  96 nypnalkllkelskknkkfkafleeaeerpecskldLeslLikPvqRlprYpLLLkellkntpeshpdyealkkaleaikevaseiN 182
                  + + +  +++++++n+ f++f+ ++e+ +e +kl+L+ +L kP  Rl rYpLLL+++lk+t+e +pd++++ k++  i+ ++s++N
  EPX70968.1 708 GQLHGKYEFEKEKANNPAFAKFVYDVERMKESRKLELNGYLTKPTTRLARYPLLLEAVLKYTEEGNPDKQDIPKVVGIIRGFLSRLN 794
                 ****************************************************************************99999998877 PP

>> DEP  Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       1.8   7.9e+03      52      71 ..     192     210 ..     186     210 .. 0.77
   2 !   46.1   0.1   8.4e-16   3.7e-12       5      72 .]     420     486 ..     416     486 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 1.8
                 CECSSSSHCC--SSSSS-EE CS
         DEP  52 iehvedkhqeFrdskqafYq 71 
                    ve +++ ++ s +a+Yq
  EPX70968.1 192 ASAVESRSNSMQSS-HAYYQ 210
                 56788888889999.9***8 PP

  == domain 2  score: 46.1 bits;  conditional E-value: 8.4e-16
                 CEEECTTEEESSE-HHHHHHHHHHHHTSSSSHHHHHHHHHHHHHCTSCECSSSSHCC--SSSSS-EEE CS
         DEP   5 kdrrkhlktypncftGseavdWLldnldiedreeAvalgqlLldqgliehvedkhqeFrdskqafYqf 72 
                  d  k++ +y+++ftG  av  L+  ++++dr  A+ +g++L +q+++++v+++h+ +rds+  +Yqf
  EPX70968.1 420 NDISKDGLIYSDAFTGDYAVALLMGIIHTSDRTLALLVGRSLDAQKFFHDVTYDHR-LRDSHREIYQF 486
                 566778899***********************************************.**********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1325 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       660  (0.0368119); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.83u 0.28s 00:00:01.10 Elapsed: 00:00:00.46
# Mc/sec: 8675.75
//
Query:       EPX70969.1  [L=873]
Description: RNA-binding protein Snd1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.3e-58  193.9   0.0    2.7e-15   56.7   0.0    5.3  5  SNase     Staphylococcal nuclease homologue
    8.7e-24   83.9   0.0    1.8e-23   82.9   0.0    1.6  1  TUDOR     Tudor domain


Domain annotation for each model (and alignments):
>> SNase  Staphylococcal nuclease homologue
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.0   0.0   7.4e-12   6.6e-08       2     108 .]      34     142 ..      33     142 .. 0.85
   2 !   44.3   0.0   2.3e-15   2.1e-11       2     108 .]     198     310 ..     197     310 .. 0.93
   3 !   39.2   0.0   8.8e-14   7.9e-10       1     107 [.     348     459 ..     348     460 .. 0.80
   4 !   56.7   0.0     3e-19   2.7e-15       5     108 .]     520     622 ..     517     622 .. 0.93
   5 !   14.0   0.0   6.1e-06     0.054      20     106 ..     769     863 ..     748     865 .. 0.73

  Alignments for each domain:
  == domain 1  score: 33.0 bits;  conditional E-value: 7.4e-12
                 EEETTEE-STSSBTTTTTSTTHHHHHHHHHHHHHHCSSEEEEE-SSBSTTSEEEEEEEETTEEHHHHHHHTTSSEE--.-BTT....STTTHHHHHHHH CS
       SNase   2 vrLvgidaPetakpkktvqpfgkeAkeflkklvlqkkvvvleldkkkDkygrllayvylnkknineeLvkeGlArvye.vyek....neekkkellkae 95 
                 ++L+ id+P+ +k +   +pf+ eA+e +++lv+++   +  ++       r  + + + + ++ e L+++GlA++   ++++    ++ + k l++a+
  EPX70969.1  34 FSLAYIDCPRFRKEGD--EPFAFEAQEHARRLVVGRPASTCTFNV-APTTKREYGCIRTADLDLTESLLRAGLAKLRPeAVRResnhENAYFKGLEEAQ 129
                 68999*******7776..**************************9.89999***********************97544444412123445567899** PP

                 HHHHHTT-GGGCT CS
       SNase  96 eeAkkkrkglWse 108
                 ++A++ ++g Ws+
  EPX70969.1 130 AAAQESKLGVWSN 142
                 ***********96 PP

  == domain 2  score: 44.3 bits;  conditional E-value: 2.3e-15
                 EEETTEE-STSSBTTT.....TTSTTHHHHHHHHHHHHHHCSSEEEEE-SSBSTTSEEEEEEEETTEEHHHHHHHTTSSEE---BTT..STTTHHHHHH CS
       SNase   2 vrLvgidaPetakpkk.....tvqpfgkeAkeflkklvlqkkvvvleldkkkDkygrllayvylnkknineeLvkeGlArvyevyek..neekkkellk 93 
                 v+L+g+++P+  ++ +     +++pfg+ A++f+++++lq++v+++ l+  + ++  ++a+v   + ni+  L+  Gl rv+  ++     e  ++l+ 
  EPX70969.1 198 VSLAGVRCPRATHTYNdqpptEEEPFGDAARQFVETRLLQRNVIIELLGV-TPSNTSFIANVLHPAGNIAHVLLSGGLGRVADLHSInlGPEAMQNLRT 295
                 89**********99999999999**************************9.99****************************9955553578999***** PP

                 HHHHHHHTT-GGGCT CS
       SNase  94 aeeeAkkkrkglWse 108
                 +e +Ak++ +g+W++
  EPX70969.1 296 IEGKAKAANLGIWKN 310
                 *************85 PP

  == domain 3  score: 39.2 bits;  conditional E-value: 8.8e-14
                 EEEETTEE-STSSBTTTTTSTTHHHHHHHHHHHHHHCSSEEEEE-S...SBSTTSEEEEEEEET.TEEHHHHHHHTTSSEE--.-BTT..STTTHHHHH CS
       SNase   1 kvrLvgidaPetakpkktvqpfgkeAkeflkklvlqkkvvvleldk...kkDkygrllayvyln.kknineeLvkeGlArvye.vyek..neekkkell 92 
                 +++L++i++P+ ++ k  ++p+  +A+ef +k++++k v v  +     +++  +    +v l+ ++n++   v++G+A+v +   ++  ++  +++l 
  EPX70969.1 348 RLQLSSIRHPRPSNEK--EAPYQLDAREFFRKKIIGKRVNVSLDFVrpaQNGLPEINACTVTLSdGRNLAMLAVENGYASVLRhRADDvdRSPIYDHLI 444
                 5789*********555..5****************999988877663433333333444555558****************9954443578899***** PP

                 HHHHHHHHTT-GGGC CS
       SNase  93 kaeeeAkkkrkglWs 107
                 +ae++A++++kg+Ws
  EPX70969.1 445 QAEKNAQEAKKGMWS 459
                 **************8 PP

  == domain 4  score: 56.7 bits;  conditional E-value: 3e-19
                 TTEE-STSSBTTT.TTSTTHHHHHHHHHHHHHHCSSEEEEE-SSBSTTSEEEEEEEET.TEEHHHHHHHTTSSEE---BTTSTTTHHHHHHHHHHHHHT CS
       SNase   5 vgidaPetakpkk.tvqpfgkeAkeflkklvlqkkvvvleldkkkDkygrllayvyln.kknineeLvkeGlArvyevyekneekkkellkaeeeAkkk 101
                 +gi++P+ta++ + +++pf+ e+ + +k+l+  ++v+v++l+   D++  +l+ + +n  +n+++ L+ eGlA+   + ++ + ++ ++  ae  A++k
  EPX70969.1 520 AGIRTPRTARNAQdKEEPFATESFNNAKSLLQ-QEVEVEVLSV--DNNSCFLGDLTVNrTSNFALDLLTEGLAWCQGYSSQSNIQYTQYHDAESSAREK 615
                 79*******9888799*********9999998.**********..*************999*************66666668899************** PP

                 T-GGGCT CS
       SNase 102 rkglWse 108
                 ++g+W++
  EPX70969.1 616 KVGIWHN 622
                 *****85 PP

  == domain 5  score: 14.0 bits;  conditional E-value: 6.1e-06
                 STTHHHHHHHHHHHHHHCSSEEEEE-SSBSTTSEEEEEEEET........TEEHHHHHHHTTSSEE---BTT.STTTHHH....HHHHHHHHHHTT-GG CS
       SNase  20 qpfgkeAkeflkklvlqkkvvvleldkkkDkygrllayvyln........kknineeLvkeGlArvyevyek.neekkke....llkaeeeAkkkrkgl 105
                  ++ ++Ak + ++l ++k  v ++++k +D+    +a+v l            in +Lv  G+A+v   ++   +ek+++    l+  +++A+ +  g+
  EPX70969.1 769 SDYYEDAKLVFRELAMNKGLVAKIDGK-TDN----VASVTLYnpsdgadfSDCINTQLVALGMASVTPRRKLaPFEKDAAslsiLQDCQQQARLNHIGM 862
                 678889999999999966666666555.554....566666557889999999************987555444444432222278899********** PP

                 G CS
       SNase 106 W 106
                 W
  EPX70969.1 863 W 863
                 * PP

>> TUDOR  Tudor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.9   0.0     2e-27   1.8e-23       3     120 ..     642     759 ..     640     760 .. 0.96

  Alignments for each domain:
  == domain 1  score: 82.9 bits;  conditional E-value: 2e-27
                 CCGEEEEEEEEEEETTEEEE.EEGGHHHHHHHHHHHHHHHHTSSCCTCSSS--TT-EEEEEETTTTEEEEEEE.EEECTTTEEEEEETTTSBEEEEEGG CS
       TUDOR   3 edktievvvsaiespskfyi.qpkeqskkleklteelqeyyaskkkaellapavgegcvavfsedgkwyRAki.teslddqkveVlfiDyGntetvpvs 99 
                 e+ + +v +s+i++++kf + + +++ ++le+l++el+++ +++++  l  ++vg +++a+ + d+  yR+ki ++++++q ++Vl+ DyG++e++p++
  EPX70969.1 642 EPTYLDVALSDIADDGKFSFqVAGPNIQQLENLMSELSDHRKAAQS--LDRYNVGMNVAAISTLDNGIYRGKIlRCNRENQSADVLLYDYGSVEQTPFK 738
                 677899****************************************..*************************************************** PP

                 GEEE--GGGCSS-BSSEEEEE CS
       TUDOR 100 dlrelpseleelppqaikcrL 120
                 +l++lp+++++l+pqa   rL
  EPX70969.1 739 NLYALPEKFSKLKPQAQLSRL 759
                 ***************986665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (873 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       399  (0.0222544); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.28s 00:00:00.92 Elapsed: 00:00:00.46
# Mc/sec: 5682.26
//
Query:       EPX70970.1  [L=123]
Description: ribosomal protein subunit L37 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.7e-17   64.0   6.9    5.7e-16   59.1   0.2    2.7  3  Ribosomal_L37  Mitochondrial ribosomal protein L37


Domain annotation for each model (and alignments):
>> Ribosomal_L37  Mitochondrial ribosomal protein L37
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1      0.11     2e+03     100     116 ..      30      46 ..      13      50 .. 0.70
   2 !   59.1   0.2   3.2e-20   5.7e-16       3      42 ..      58      97 ..      56     105 .. 0.89
   3 !    9.1   0.5   9.9e-05       1.8      98     120 .]     100     122 ..      97     122 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.11
  Ribosomal_L37 100 lkkalrkkrrakIkesN 116
                    + + ++k+r +kI+++ 
     EPX70970.1  30 RSQFIQKEREQKIEANK 46 
                    44556677777777664 PP

  == domain 2  score: 59.1 bits;  conditional E-value: 3.2e-20
  Ribosomal_L37  3 kSsvpaGtklkglnilKnkadpvaleDseYPeWLWtllds 42
                    Ssv aGt+lk+lni   + dpva+eD+eYPeWLWtlld 
     EPX70970.1 58 ASSVLAGTILKNLNIKAGGVDPVAKEDNEYPEWLWTLLDA 97
                   79*************************************4 PP

  == domain 3  score: 9.1 bits;  conditional E-value: 9.9e-05
  Ribosomal_L37  98 eelkkalrkkrrakIkesNflka 120
                    ++ + al ++r+++I+ sNflk+
     EPX70970.1 100 SDSRTALSRSRKNAIRTSNFLKK 122
                    6778999**************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       407  (0.0227007); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.28s 00:00:00.73 Elapsed: 00:00:00.45
# Mc/sec: 815.49
//
Query:       EPX70971.1  [L=489]
Description: ATP(CTP) tRNA nucleotidyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.3e-21   76.0   0.1    6.2e-21   75.1   0.1    1.5  1  PolyA_pol        Poly A polymerase head domain
    3.4e-06   26.7   0.0    1.7e-05   24.5   0.0    2.2  3  PolyA_pol_RNAbd  Probable RNA and SrmB- binding site of polym


Domain annotation for each model (and alignments):
>> PolyA_pol  Poly A polymerase head domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.1   0.1   6.9e-25   6.2e-21       2     125 ..      38     179 ..      37     180 .. 0.84

  Alignments for each domain:
  == domain 1  score: 75.1 bits;  conditional E-value: 6.9e-25
                 EEETHHHHHHHTT---CEEEEEEC.S-HHHHHHHHHHHHT-EEEE.....ETTTTCCCCEECCEE.EEECCEECEEEEEE---SSHHH........... CS
   PolyA_pol   2 ylvGGaVRDlllgkepkDvDlatd.aapeelakllrkkvkealls.....geefqtiavlekkql.levatfRlekdesdarnpesekste........ 85 
                 +l+GG+VRD+llg +++D+D++++  ++  +ak++ + v++   +     ++  +  +v  ++++ le+at+ l    +d++  ++e + +        
  EPX70971.1  38 RLAGGWVRDKLLGFSSDDLDVTLNkINGIDFAKAILEYVNVLDPKiaipyKQSIGKLTVNPDQSKhLETATLSLYGLDIDFVGLREEIYDDksripvvh 136
                 89*********************9768888888888877664322210134445555554444336*******************9999889******* PP

                 ..HHHHHHCTSSBGGGS-EEECTTTCEE-TTS.HHHHHHTTEE CS
   PolyA_pol  86 ..sleeDlkrRDftiNalaynlnkgkvlDlfg.GikdLkskvi 125
                   ++e D +rRDft+N+l+yn+ +++++D+++ G  dLk++ +
  EPX70971.1 137 qgTIETDTYRRDFTLNSLFYNIRSEQIEDITKrGFTDLKNRNL 179
                 ***************************************9976 PP

>> PolyA_pol_RNAbd  Probable RNA and SrmB- binding site of polymerase A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0      0.79   7.1e+03       4      21 ..      10      27 ..       9      28 .. 0.79
   2 ?   -2.8   0.0      0.63   5.7e+03       5      28 ..     164     189 ..     162     191 .. 0.57
   3 !   24.5   0.0   1.9e-09   1.7e-05      21      58 ..     230     268 ..     208     273 .. 0.91

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 0.79
  PolyA_pol_RNAbd  4 IepeTaaairklaplLkk 21
                     +e+++ + ++k a+ +++
       EPX70971.1 10 VEKNVVNLLKKTAEFIEQ 27
                     688888889999988876 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.63
  PolyA_pol_RNAbd   5 epeTaaairklap..lLkkispeRif 28 
                      e  T+  +++l+   l++ isp R f
       EPX70971.1 164 EDITKRGFTDLKNrnLVTPISPIRSF 189
                      55555555555555577777777766 PP

  == domain 3  score: 24.5 bits;  conditional E-value: 1.9e-09
  PolyA_pol_RNAbd  21 kispeRifeEllKlLlsghpeaglelLretgLlkylf.P 58 
                      k+s+eR+ eE++K+L +++p  +l l + +g+ +++f P
       EPX70971.1 230 KVSKERVGEEVEKMLRGPNPDLSLHLIYSSGASSFMFgP 268
                      79*****************************99999854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (489 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       529  (0.0295053); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 3351.01
//
Query:       EPX70972.1  [L=179]
Description: meiotically upregulated Mug117 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-19   70.1   9.4    3.1e-19   69.7   9.4    1.2  1  MU117     Meiotically up-regulated gene family


Domain annotation for each model (and alignments):
>> MU117  Meiotically up-regulated gene family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.7   9.4   1.7e-23   3.1e-19       1     101 []      61     160 ..      61     160 .. 0.93

  Alignments for each domain:
  == domain 1  score: 69.7 bits;  conditional E-value: 1.7e-23
       MU117   1 vdckGsslCst..vkakaCdeAleklyeddtiydkytsrteesksvegkakCtaiytc.ddye.vtgkelkekaesirkkggckkCGsktls.....ns 90 
                 +dckGs+lC++  ++++aC  A++k y+++ iy++yts+t        +++Ctaiy+c  dy  +tg+e++e+++++  +  c++CG+++++     ++
  EPX70972.1  61 NDCKGSMLCPMlrGESRACPYAYMK-YNRSLIYHGYTSYT--------ANWCTAIYKCdGDYPsRTGNEIIEQFDQLDLQ--CASCGTRHFDdkstgTR 148
                 69*********9999*********9.************88........79********755558***************9..**********9999999 PP

       MU117  91 Ckvtlnyc.tnC 101
                 C v+lnyc  +C
  EPX70972.1 149 CYVRLNYCyPDC 160
                 ********8887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       489  (0.0272742); expected 358.6 (0.02)
Passed bias filter:                      271  (0.0151152); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.28s 00:00:00.72 Elapsed: 00:00:00.45
# Mc/sec: 1203.20
//
Query:       EPX70973.1  [L=213]
Description: mediator complex subunit Med9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1797  (0.100229); expected 358.6 (0.02)
Passed bias filter:                      284  (0.0158403); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.29s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 1431.13
//
Query:       EPX70974.1  [L=723]
Description: transcription elongation regulator [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      8e-24   84.3   0.4    1.5e-23   83.4   0.4    1.5  1  TFIIS_M   Transcription factor S-II (TFIIS), central domain
    4.5e-23   81.8   0.0    7.7e-23   81.1   0.0    1.3  1  SPOC      SPOC domain
    3.4e-09   36.5  10.3    5.9e-09   35.7  10.3    1.4  1  PHD       PHD-finger
  ------ inclusion threshold ------
      0.018   15.1   6.5      0.039   14.0   6.5    1.6  1  zf-CW     CW-type Zinc Finger
      0.095   12.3   6.4       0.18   11.4   6.4    1.4  1  PHD_2     PHD-finger


Domain annotation for each model (and alignments):
>> TFIIS_M  Transcription factor S-II (TFIIS), central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.4   0.4   4.3e-27   1.5e-23       1     111 [.     215     338 ..     215     339 .. 0.90

  Alignments for each domain:
  == domain 1  score: 83.4 bits;  conditional E-value: 4.3e-27
                 -HHHHHHHHHHHHHTT---...-........--THHHHHHHHHHHHHH......HT------HHHHHHHHHHHHHS-TT-HHHHHTSSSS--STTTTS- CS
     TFIIS_M   1 dkvRdkcrelLaealeedsseaee.......eedveelaaeiEealfe......kekkstdkkykqkvrslvfNLkdkkNpeLrrrvlsgeispeklvk 86 
                 ++vR++++++  +++e++ ++a++         +++  a+++E+ +f        +  + ++ky++k+r l fNL d+kNp +r rvl++ei+++klv+
  EPX70974.1 215 NPVRKSVAKAWVSVFETILKKADQegvtgleGINPTVSALKLENTMFLelsyneTQSANPNNKYREKFRALRFNLVDDKNPAFRARVLKQEIPFSKLVH 313
                 589****************98887676666444999999999999998888888667788899************************************ PP

                 --TTTSS-HHHHHHHHHHHHHHHHT CS
     TFIIS_M  87 mspeElaseelkeereklekealee 111
                 m++eE+a+++lk++ e +++++ e+
  EPX70974.1 314 MTSEEMANPDLKSLAETIRQQSTEN 338
                 *********************9875 PP

>> SPOC  SPOC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.1   0.0   2.2e-26   7.7e-23       4     149 ..     479     627 ..     476     629 .. 0.87

  Alignments for each domain:
  == domain 1  score: 81.1 bits;  conditional E-value: 2.2e-26
                 XXXXX---EEEEEETTEEEEEEEEEE---------.....-SEEEE-EEEEHHHHHHHHHH-S.....EEEEEEEEESSGGGHHHHHHHHHHHHTTTEE CS
        SPOC   4 asklpvvWqGalslksvssfqvqahllsgdrslvs.....pslLritqRlrldqvkkyldevsrritadllavalfpsdesdesgfaelvdYLksKqra 97 
                 +++++ +W+G +++ svs+f++ a+l sg+ +l+      +s+  i++R+++    +yl++++++++++++ v +fp++++++ gf+ l++Y+ +++r+
  EPX70974.1 479 SPRTNALWRGKVKMASVSEFSAEAILSSGHIDLKFlfeilSSTALIEGRISIASTLQYLQALQKSQSKIIVSVLFFPTSSNEIDGFNVLYNYFLERNRY 577
                 678899***************************4355566999***********************9999999899*********************** PP

                 EE.....EE-TTS-EEEEE-S......STHHHHTS.......-----SSEEEEEE CS
        SPOC  98 GvvnlnksglnqngvlyifPpga...lcefaesllresapelekskddhLlivvv 149
                 Gv    +s+++++++ yi+P+++   ++e+++ l ++ +   ++ ++  Ll+v+v
  EPX70974.1 578 GV---LRSKSASVKDAYIIPIPSgeeIPEVLNLLHDSKLV--KTRESLSLLGVFV 627
                 **...999*************9977766666666655555..5677778888876 PP

>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.7  10.3   1.6e-12   5.9e-09       1      51 [.      33      79 ..      33      80 .. 0.93

  Alignments for each domain:
  == domain 1  score: 35.7 bits;  conditional E-value: 1.6e-12
                SBTTTTSTTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSSTBSSTTTHT CS
         PHD  1 rCavCkkksdeeeelvqCdgCkrwfHqkClkppleseekpegewlCekCke 51
                rC +C+++sd+++ +vqCdgC+ w+H  C+++++e   +pe +++Ce+C++
  EPX70974.1 33 RC-ICGSQSDNGDVWVQCDGCDCWQHAGCVGLSEE--TIPE-SFFCETCRR 79
                69.******************************88..7776.8******85 PP

>> zf-CW  CW-type Zinc Finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   6.5   1.1e-05     0.039       2      47 ..      46      90 ..      45      91 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1.1e-05
       zf-CW  2 wVqCdkClKWRrlptev.dkselipekWvCsmnpsdkkensCdapee 47
                wVqCd C  W      v  ++e+ipe+++C++ +  ++e++ + ++e
  EPX70974.1 46 WVQCDGCDCWQHAG-CVgLSEETIPESFFCETCR-RPAESDHENEQE 90
                **********8876.55699************99.688877777666 PP

>> PHD_2  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   6.4   5.1e-05      0.18       4      36 .]      46      78 ..      44      78 .. 0.94

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 5.1e-05
       PHD_2  4 llsCdkCsvaVHasCYGvskesdgeeWlCrrCe 36
                 ++Cd+C    Ha C G+s+e   e++ C+ C+
  EPX70974.1 46 WVQCDGCDCWQHAGCVGLSEETIPESFFCETCR 78
                599*****************************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (723 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       834  (0.0465168); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.72u 0.35s 00:00:01.06 Elapsed: 00:00:00.54
# Mc/sec: 4063.18
//
Query:       EPX70975.1  [L=584]
Description: chaperone activator Sti1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-39  132.1  28.9    1.2e-06   28.0   0.8    9.3  9  TPR_1     Tetratricopeptide repeat
    1.4e-34  117.8  11.4    2.9e-19   68.7   2.9    2.9  2  STI1      STI1 domain
    5.9e-32  107.2  28.2    2.4e-05   24.1   0.5    9.5  9  TPR_2     Tetratricopeptide repeat
      2e-18   65.0  24.7     0.0014   18.7   0.0    8.9  8  TPR_8     Tetratricopeptide repeat
    2.4e-16   59.8  19.6    1.5e-08   34.8   2.8    6.7  7  TPR_12    Tetratricopeptide repeat
    1.6e-15   57.3  14.4     0.0099   16.4   0.4    6.9  6  TPR_19    Tetratricopeptide repeat
    3.6e-14   52.2  22.8      0.003   17.2   1.2    7.4  7  TPR_11    TPR repeat
    3.8e-14   52.2   9.2       0.32   11.9   0.0    7.5  7  TPR_14    Tetratricopeptide repeat
    6.1e-12   45.1   9.6     0.0092   16.3   0.0    7.8  7  TPR_17    Tetratricopeptide repeat
    2.7e-10   39.5   6.0    1.8e-05   24.4   0.0    5.8  6  TPR_7     Tetratricopeptide repeat
    2.9e-10   40.6  22.6     0.0062   17.2   0.1    6.9  7  TPR_16    Tetratricopeptide repeat
    4.1e-08   33.3   1.2       0.27   11.4   0.0    5.3  5  TPR_9     Tetratricopeptide repeat
    3.8e-06   26.6  11.2      0.019   14.9   0.1    6.1  7  TPR_10    Tetratricopeptide repeat
    0.00013   21.7   7.7       0.25   11.0   0.3    4.7  4  RPN7      26S proteasome subunit RPN7
     0.0066   16.4   5.8       0.45   10.6   1.1    3.8  3  TPR_3     Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.023   14.1   0.6      0.092   12.1   0.0    2.3  3  TPR_MalT  MalT-like TPR region
      0.038   14.6  18.6       0.46   11.2   0.1    6.8  6  TPR_6     Tetratricopeptide repeat
      0.043   14.0  14.7        1.6    9.0   2.1    5.2  5  ANAPC3    Anaphase-promoting complex, cyclosome, subunit 3
       0.63    8.7   4.9       0.84    8.3   0.1    2.7  3  DUF3808   Protein of unknown function (DUF3808)
       0.75    9.9  18.3      0.071   13.2   1.2    5.3  5  MIT       MIT (microtubule interacting and transport) domain
        6.6    7.3  14.0        4.5    7.8   4.0    3.1  2  DUF3391   Domain of unknown function (DUF3391)


Domain annotation for each model (and alignments):
>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   0.8   1.4e-09   1.2e-06       4      34 .]       5      35 ..       2      35 .. 0.92
   2 !    9.3   0.1    0.0012         1       4      31 ..      39      66 ..      37      68 .. 0.84
   3 !   20.6   0.0   3.3e-07   0.00028       1      34 []      70     103 ..      70     103 .. 0.97
   4 ?    5.3   0.2     0.022        19       8      27 ..     265     284 ..     258     284 .. 0.89
   5 !   12.6   0.6   0.00011      0.09       4      29 ..     294     319 ..     291     323 .. 0.94
   6 !   26.4   0.0   4.6e-09     4e-06       1      29 [.     332     360 ..     332     364 .. 0.95
   7 !    6.4   0.0    0.0098       8.4       7      33 ..     398     424 ..     396     425 .. 0.89
   8 !   18.7   0.0   1.3e-06    0.0011       2      34 .]     427     459 ..     426     459 .. 0.94
   9 !   18.1   1.0   1.9e-06    0.0017       1      32 [.     460     491 ..     460     493 .. 0.93

  Alignments for each domain:
  == domain 1  score: 28.0 bits;  conditional E-value: 1.4e-09
                HHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1  4 lynlGnayfklgkydeAleyyekALelnPnn 34
                l+ +Gna f +++y+ A++y+++A++l+ nn
  EPX70975.1  5 LKAKGNAAFAQKDYKTAIDYFSQAIQLDGNN 35
                6779************************987 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.0012
                HHHHHHHHHHTT-HHHHHHHHHHHHHHS CS
       TPR_1  4 lynlGnayfklgkydeAleyyekALeln 31
                + n+ ++y + ++y+ Ale+  k+  + 
  EPX70975.1 39 YSNRSACYASVKDYKNALEDATKCTDIK 66
                667778**************99997776 PP

  == domain 3  score: 20.6 bits;  conditional E-value: 3.3e-07
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   1 akalynlGnayfklgkydeAleyyekALelnPnn 34 
                 ak + ++G+a++ lg++  A +++e+ L+ + nn
  EPX70975.1  70 AKGWSRKGAALHGLGDLTAAKAAFEEGLKFDSNN 103
                 799****************************998 PP

  == domain 4  score: 5.3 bits;  conditional E-value: 0.022
                 HHHHHHTT-HHHHHHHHHHH CS
       TPR_1   8 GnayfklgkydeAleyyekA 27 
                 Gn  +k+ ++  A+e+y+kA
  EPX70975.1 265 GNENYKKRNFPVAIEHYKKA 284
                 889999999999*******9 PP

  == domain 5  score: 12.6 bits;  conditional E-value: 0.00011
                 HHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_1   4 lynlGnayfklgkydeAleyyekALe 29 
                 l+nl++ay++  ++d ++  +++A+e
  EPX70975.1 294 LNNLAAAYYEADELDNCESTCKEAIE 319
                 8************************9 PP

  == domain 6  score: 26.4 bits;  conditional E-value: 4.6e-09
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_1   1 akalynlGnayfklgkydeAleyyekALe 29 
                 akal +lG +y+k g++  A+ey+++ L+
  EPX70975.1 332 AKALGRLGTTYQKRGDLANAIEYFQRSLT 360
                 89************************996 PP

  == domain 7  score: 6.4 bits;  conditional E-value: 0.0098
                 HHHHHHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1   7 lGnayfklgkydeAleyyekALelnPn 33 
                 +Gn +fk g++  A++ y +  +  P+
  EPX70975.1 398 KGNDLFKAGDFAGAIKEYTEMTKRAPT 424
                 799*************99998888887 PP

  == domain 8  score: 18.7 bits;  conditional E-value: 1.3e-06
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALelnPnn 34 
                 + + n+++ay+k   + e + +++ A++l+P++
  EPX70975.1 427 RGFGNRAAAYLKVMAPAESIRDCNHAIQLDPTF 459
                 5789***************************96 PP

  == domain 9  score: 18.1 bits;  conditional E-value: 1.9e-06
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHST CS
       TPR_1   1 akalynlGnayfklgkydeAleyyekALelnP 32 
                 aka+ ++++a+f l++y +++++++ A  ++ 
  EPX70975.1 460 AKAYVRKAQALFMLKDYGKCIDACNAAADVDR 491
                 89************************988876 PP

>> STI1  STI1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.7   2.9   3.4e-22   2.9e-19       1      55 []     138     192 ..     132     192 .. 0.99
   2 !   53.2   1.4   2.4e-17   2.1e-14       2      54 ..     524     576 ..     523     577 .. 0.97

  Alignments for each domain:
  == domain 1  score: 68.7 bits;  conditional E-value: 3.4e-22
        STI1   1 dpelfaklaanPetrellsDPefvakleeiqsNPqalqqymsDprimtvlsvLmg 55 
                 dp+ ++kla+nPet+ ll D +f++kl+ iq+NP ++++ ++Dpr+m+v+++Lmg
  EPX70975.1 138 DPKFIQKLASNPETASLLGDASFMSKLQNIQKNPGSIMSELNDPRMMKVIGMLMG 192
                 799***************************************************8 PP

  == domain 2  score: 53.2 bits;  conditional E-value: 2.4e-17
        STI1   2 pelfaklaanPetrellsDPefvakleeiqsNPqalqqymsDprimtvlsvLm 54 
                 +e +a+++++Pe+ ++l+DP ++a+l + ++NP+al+++m+ p +  ++ +L+
  EPX70975.1 524 EETMARIQNDPEVLAILQDPAMQAILGQARENPAALMEHMKSPAVKSKIDKLI 576
                 899***********************************************997 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.5   2.8e-08   2.4e-05       1      34 []       2      35 ..       2      35 .. 0.93
   2 !    8.2   0.0    0.0036         3       3      29 ..      38      64 ..      36      68 .. 0.89
   3 !   17.4   0.1     4e-06    0.0035       1      34 []      70     103 ..      70     103 .. 0.96
   4 !    7.4   0.1    0.0061       5.2       7      27 ..     264     284 ..     258     287 .. 0.90
   5 !    9.7   0.3    0.0012      0.99       3      29 ..     293     319 ..     291     323 .. 0.93
   6 !   19.2   0.1     1e-06   0.00086       1      28 [.     332     359 ..     332     363 .. 0.94
   7 !   14.3   0.0   3.9e-05     0.033       5      34 .]     396     425 ..     392     425 .. 0.90
   8 ?    6.4   0.0     0.013        11       6      33 ..     431     458 ..     426     459 .. 0.84
   9 !   14.0   0.5   4.8e-05     0.041       1      31 [.     460     490 ..     460     492 .. 0.92

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 2.8e-08
       TPR_2  1 aealynlGlayyklgdyeeAleafekAleldPnn 34
                ae l + G+a+++++dy+ A+++f +A++ld nn
  EPX70975.1  2 AEDLKAKGNAAFAQKDYKTAIDYFSQAIQLDGNN 35
                5678899************************987 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.0036
       TPR_2  3 alynlGlayyklgdyeeAleafekAle 29
                ++ n+  +y+  +dy+ Ale+  k+  
  EPX70975.1 38 LYSNRSACYASVKDYKNALEDATKCTD 64
                799******************999865 PP

  == domain 3  score: 17.4 bits;  conditional E-value: 4e-06
       TPR_2   1 aealynlGlayyklgdyeeAleafekAleldPnn 34 
                 a+++ + G a+  lgd+  A++afe+ l+ d nn
  EPX70975.1  70 AKGWSRKGAALHGLGDLTAAKAAFEEGLKFDSNN 103
                 789**************************99987 PP

  == domain 4  score: 7.4 bits;  conditional E-value: 0.0061
       TPR_2   7 lGlayyklgdyeeAleafekA 27 
                  G+  yk+ ++  A+e+++kA
  EPX70975.1 264 VGNENYKKRNFPVAIEHYKKA 284
                 58899***************9 PP

  == domain 5  score: 9.7 bits;  conditional E-value: 0.0012
       TPR_2   3 alynlGlayyklgdyeeAleafekAle 29 
                 +l+nl+ ayy++++++ ++  +++A+e
  EPX70975.1 293 YLNNLAAAYYEADELDNCESTCKEAIE 319
                 79***********************98 PP

  == domain 6  score: 19.2 bits;  conditional E-value: 1e-06
       TPR_2   1 aealynlGlayyklgdyeeAleafekAl 28 
                 a+al +lG  y k+gd++ A+e+f+++l
  EPX70975.1 332 AKALGRLGTTYQKRGDLANAIEYFQRSL 359
                 78999*********************98 PP

  == domain 7  score: 14.3 bits;  conditional E-value: 3.9e-05
       TPR_2   5 ynlGlayyklgdyeeAleafekAleldPnn 34 
                  + G+ ++k+gd++ A++ + +  + +P++
  EPX70975.1 396 RAKGNDLFKAGDFAGAIKEYTEMTKRAPTD 425
                 678***********************9986 PP

  == domain 8  score: 6.4 bits;  conditional E-value: 0.013
       TPR_2   6 nlGlayyklgdyeeAleafekAleldPn 33 
                 n++ ay+k   ++e +++++ A++ldP+
  EPX70975.1 431 NRAAAYLKVMAPAESIRDCNHAIQLDPT 458
                 7777777777889**************8 PP

  == domain 9  score: 14.0 bits;  conditional E-value: 4.8e-05
       TPR_2   1 aealynlGlayyklgdyeeAleafekAleld 31 
                 a+a+ + ++a++ l+dy ++++a+++A   d
  EPX70975.1 460 AKAYVRKAQALFMLKDYGKCIDACNAAADVD 490
                 799***********************98766 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.2     4e-05     0.034       7      34 .]       8      35 ..       7      35 .. 0.93
   2 ?    6.9   0.1      0.01       8.6       4      31 ..      39      66 ..      38      68 .. 0.89
   3 !   17.1   0.0   5.2e-06    0.0045       1      34 []      70     103 ..      70     103 .. 0.93
   4 ?    5.0   0.7     0.039        34       3      29 ..     293     319 ..     291     320 .. 0.94
   5 !   18.7   0.0   1.6e-06    0.0014       1      28 [.     332     359 ..     332     361 .. 0.94
   6 ?    0.7   0.0      0.97   8.3e+02      12      33 ..     403     424 ..     398     425 .. 0.87
   7 ?    1.0   0.0      0.74   6.3e+02      18      33 ..     443     458 ..     428     459 .. 0.85
   8 !   10.9   0.5    0.0005      0.43       1      33 [.     460     492 ..     460     493 .. 0.95

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 4e-05
                HHHHHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8  7 lgsiylklgdyeeAkeyyekaleldpdn 34
                +g++ + ++dy+ A+ y+ +a++ld +n
  EPX70975.1  8 KGNAAFAQKDYKTAIDYFSQAIQLDGNN 35
                7999********************9875 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.01
                HHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
       TPR_8  4 yynlgsiylklgdyeeAkeyyekaleld 31
                y n + +y + +dy++A e   k+++++
  EPX70975.1 39 YSNRSACYASVKDYKNALEDATKCTDIK 66
                66788899****************9986 PP

  == domain 3  score: 17.1 bits;  conditional E-value: 5.2e-06
                 CCHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8   1 aeayynlgsiylklgdyeeAkeyyekaleldpdn 34 
                 a+ + ++g +++ lgd+ +Ak+++e+ l+ d +n
  EPX70975.1  70 AKGWSRKGAALHGLGDLTAAKAAFEEGLKFDSNN 103
                 578999***********************99886 PP

  == domain 4  score: 5.0 bits;  conditional E-value: 0.039
                 HHHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyekale 29 
                 +++nl+ +y +  ++++ ++++++a+e
  EPX70975.1 293 YLNNLAAAYYEADELDNCESTCKEAIE 319
                 789**********************97 PP

  == domain 5  score: 18.7 bits;  conditional E-value: 1.6e-06
                 CCHHHHHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_8   1 aeayynlgsiylklgdyeeAkeyyekal 28 
                 a+a+ +lg +y+k gd+ +A+ey+++ l
  EPX70975.1 332 AKALGRLGTTYQKRGDLANAIEYFQRSL 359
                 7899*********************987 PP

  == domain 6  score: 0.7 bits;  conditional E-value: 0.97
                 HHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8  12 lklgdyeeAkeyyekaleldpd 33 
                 +k gd+  A++ y + ++ +p+
  EPX70975.1 403 FKAGDFAGAIKEYTEMTKRAPT 424
                 688**********999998886 PP

  == domain 7  score: 1.0 bits;  conditional E-value: 0.74
                 HHHHHHHHHHHHHHHH CS
       TPR_8  18 eeAkeyyekaleldpd 33 
                  e++  +++a++ldp+
  EPX70975.1 443 AESIRDCNHAIQLDPT 458
                 689999********96 PP

  == domain 8  score: 10.9 bits;  conditional E-value: 0.0005
                 CCHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   1 aeayynlgsiylklgdyeeAkeyyekaleldpd 33 
                 a+ay++++++++ l+dy + + +++ a + d++
  EPX70975.1 460 AKAYVRKAQALFMLKDYGKCIDACNAAADVDRK 492
                 79*************************999986 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.3   3.4e-06    0.0029       9      74 ..       8      65 ..       3      68 .. 0.91
   2 !    9.7   0.4    0.0012         1       5      72 ..      38      97 ..      35     102 .. 0.72
   3 ?    0.5   0.0      0.89   7.6e+02      58      75 ..     271     288 ..     262     290 .. 0.64
   4 !   34.8   2.8   1.8e-11   1.5e-08       5      72 ..     293     359 ..     289     360 .. 0.95
   5 ?   -0.2   0.0       1.5   1.3e+03       9      27 ..     398     416 ..     392     422 .. 0.74
   6 ?   -2.0   0.0       5.4   4.6e+03       8      32 ..     431     455 ..     429     456 .. 0.85
   7 !    8.6   0.0    0.0026       2.2       3      38 ..     460     495 ..     458     501 .. 0.89

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 3.4e-06
      TPR_12  9 laavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealai 74
                 +++ +++++y  A++++ +a+++     G +h    + + n + +y   ++y+ Ale  +++++i
  EPX70975.1  8 KGNAAFAQKDYKTAIDYFSQAIQLD----GNNH----ILYSNRSACYASVKDYKNALEDATKCTDI 65
                6999*****************8888....7888....57*******************99999987 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.0012
      TPR_12  5 alnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleeal 72
                +++n+ a+++  ++y  Ale   k+ +i      +d+ +        g +++ lg++ +A +++ee l
  EPX70975.1 38 LYSNRSACYASVKDYKNALEDATKCTDIK-----HDW-AKG--WSRKGAALHGLGDLTAAKAAFEEGL 97
                6789999******************9999.....555.333..3344444457777777777777766 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.89
      TPR_12  58 lgryeeAlelleealaia 75 
                   ++  A+e++++a + +
  EPX70975.1 271 KRNFPVAIEHYKKAWETY 288
                 446677777777775555 PP

  == domain 4  score: 34.8 bits;  conditional E-value: 1.8e-11
      TPR_12   5 alnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleeal 72 
                  lnnlaa+++++ ++d +++ +++a+e+ r l  + + l a +l  Lg++y+++g+++ A+e+++++l
  EPX70975.1 293 YLNNLAAAYYEADELDNCESTCKEAIEQGRDLRADFK-LIAKALGRLGTTYQKRGDLANAIEYFQRSL 359
                 4679*****************************9999.*****************************9 PP

  == domain 5  score: -0.2 bits;  conditional E-value: 1.5
      TPR_12   9 laavlrrlgrydeAlelle 27 
                  ++ l+++g+++ A++ + 
  EPX70975.1 398 KGNDLFKAGDFAGAIKEYT 416
                 5777888888888887665 PP

  == domain 6  score: -2.0 bits;  conditional E-value: 5.4
      TPR_12   8 nlaavlrrlgrydeAlellekalei 32 
                 n+aa++++    +e+++ +++a+++
  EPX70975.1 431 NRAAAYLKVMAPAESIRDCNHAIQL 455
                 7899999999999999999999876 PP

  == domain 7  score: 8.6 bits;  conditional E-value: 0.0026
      TPR_12   3 atalnnlaavlrrlgrydeAlellekaleiarrllG 38 
                 a+a+++ a++l+ l++y ++++ +++a ++ r+ ++
  EPX70975.1 460 AKAYVRKAQALFMLKDYGKCIDACNAAADVDRKEPN 495
                 78999**************************99844 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.2     9e-05     0.077       1      45 [.      12      56 ..      12      57 .. 0.88
   2 ?    6.2   0.2     0.018        15       5      31 ..      84     110 ..      80     117 .. 0.89
   3 !   16.4   0.4   1.2e-05    0.0099       5      61 ..     272     328 ..     268     335 .. 0.86
   4 ?    5.3   0.0     0.032        27       4      21 ..     345     362 ..     343     371 .. 0.85
   5 !   10.7   0.0   0.00071       0.6       1      37 [.     402     438 ..     402     446 .. 0.94
   6 !    9.2   0.2     0.002       1.7      16      59 ..     451     494 ..     441     496 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 9e-05
      TPR_19  1 llaegdyaeAlalleqalqedpknaearllLAeallalgqldeAe 45
                ++a++dy  A+++++qa+q d +n  +  +   ++ + ++++ A 
  EPX70975.1 12 AFAQKDYKTAIDYFSQAIQLDGNNHILYSNRSACYASVKDYKNAL 56
                689********************9988888888888888888775 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.018
      TPR_19   5 gdyaeAlalleqalqedpknaearllL 31 
                 gd+++A a++e+ l+ d +na ++ +L
  EPX70975.1  84 GDLTAAKAAFEEGLKFDSNNAQLLNGL 110
                 9********************999887 PP

  == domain 3  score: 16.4 bits;  conditional E-value: 1.2e-05
      TPR_19   5 gdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpdd.ary 61 
                  ++  A++++++a++ + +  ++   LA a++++ +ld  e +++++ e+ +d  a+ 
  EPX70975.1 272 RNFPVAIEHYKKAWETYKDITYLNN-LAAAYYEADELDNCESTCKEAIEQGRDLrADF 328
                 67889***********999999999.************************99943554 PP

  == domain 4  score: 5.3 bits;  conditional E-value: 0.032
      TPR_19   4 egdyaeAlalleqalqed 21 
                 +gd+a+A++++++ l+e 
  EPX70975.1 345 RGDLANAIEYFQRSLTEH 362
                 8************99884 PP

  == domain 5  score: 10.7 bits;  conditional E-value: 0.00071
      TPR_19   1 llaegdyaeAlalleqalqedpknaearllLAealla 37 
                 l+++gd+a A++ ++++ + +p +++   + A a+l+
  EPX70975.1 402 LFKAGDFAGAIKEYTEMTKRAPTDPRGFGNRAAAYLK 438
                 689***************************9999997 PP

  == domain 6  score: 9.2 bits;  conditional E-value: 0.002
      TPR_19  16 qalqedpknaearllLAeallalgqldeAealLdalpeedpdda 59 
                  a+q dp  a a  + A+al+ l+++ + +++++a+ + d++++
  EPX70975.1 451 HAIQLDPTFAKAYVRKAQALFMLKDYGKCIDACNAAADVDRKEP 494
                 6899*********************************9999865 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   1.2   3.6e-06     0.003       1      34 [.       9      42 ..       9      50 .. 0.93
   2 ?   -0.5   0.0       1.2     1e+03      13      22 ..      48      57 ..      46      58 .. 0.86
   3 !   10.3   0.1   0.00051      0.43       2      34 ..      78     110 ..      77     110 .. 0.90
   4 !    6.8   3.2    0.0064       5.5       1      40 [.     265     303 ..     265     305 .. 0.89
   5 ?    1.1   0.0      0.37   3.2e+02       3      19 ..     341     357 ..     339     360 .. 0.81
   6 !   14.4   0.0   2.7e-05     0.023       1      40 [.     399     438 ..     399     439 .. 0.97
   7 !    9.9   0.0   0.00066      0.57      18      40 ..     450     472 ..     443     474 .. 0.85

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 3.6e-06
      TPR_11  1 GdayyeqGkyeeAieaYkkAlkldPdnaeayynL 34
                G+a ++q +y+ Ai  +++A++ld +n  +y+n+
  EPX70975.1  9 GNAAFAQKDYKTAIDYFSQAIQLDGNNHILYSNR 42
                9******************************997 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 1.2
      TPR_11 13 AieaYkkAlk 22
                ++++Yk+Al+
  EPX70975.1 48 SVKDYKNALE 57
                7899****97 PP

  == domain 3  score: 10.3 bits;  conditional E-value: 0.00051
      TPR_11   2 dayyeqGkyeeAieaYkkAlkldPdnaeayynL 34 
                  a++ +G++++A +a+++ lk+d++na ++++L
  EPX70975.1  78 AALHGLGDLTAAKAAFEEGLKFDSNNAQLLNGL 110
                 577889*********************999876 PP

  == domain 4  score: 6.8 bits;  conditional E-value: 0.0064
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldPdnaeayynLGlayyk 40 
                 G++ y++ +++ Aie+YkkA + + ++ + ++nL++ayy+
  EPX70975.1 265 GNENYKKRNFPVAIEHYKKAWE-TYKDITYLNNLAAAYYE 303
                 788899999999*********9.67889**********97 PP

  == domain 5  score: 1.1 bits;  conditional E-value: 0.37
      TPR_11   3 ayyeqGkyeeAieaYkk 19 
                  y ++G++ +Aie +++
  EPX70975.1 341 TYQKRGDLANAIEYFQR 357
                 5779********98887 PP

  == domain 6  score: 14.4 bits;  conditional E-value: 2.7e-05
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldPdnaeayynLGlayyk 40 
                 G+ +++ G++ +Ai++Y +  k  P++++ + n+++ay+k
  EPX70975.1 399 GNDLFKAGDFAGAIKEYTEMTKRAPTDPRGFGNRAAAYLK 438
                 99************************************97 PP

  == domain 7  score: 9.9 bits;  conditional E-value: 0.00066
      TPR_11  18 kkAlkldPdnaeayynLGlayyk 40 
                 + A++ldP++a ay   ++a+++
  EPX70975.1 450 NHAIQLDPTFAKAYVRKAQALFM 472
                 67*************99999986 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.0   0.00083      0.71       3      34 ..       4      35 ..       2      42 .. 0.88
   2 !    7.8   0.1    0.0081       6.9       4      37 ..      73     106 ..      70     111 .. 0.86
   3 ?    4.4   0.1       0.1        87       7      33 ..     297     323 ..     293     334 .. 0.85
   4 !    9.6   0.0    0.0022       1.9       3      31 ..     334     362 ..     332     371 .. 0.83
   5 !   11.9   0.0   0.00038      0.32       8      37 ..     399     428 ..     392     437 .. 0.84
   6 ?    6.2   0.1     0.026        23       8      43 ..     433     468 ..     431     469 .. 0.87
   7 ?    4.1   0.1      0.12     1e+02       2      30 ..     461     489 ..     460     496 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00083
      TPR_14  3 allalaeallalGdpdeAiallrralalaPdd 34
                 l+a + a +a+ d+++Ai+++ +a++l+ ++
  EPX70975.1  4 DLKAKGNAAFAQKDYKTAIDYFSQAIQLDGNN 35
                5778899********************99887 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0081
      TPR_14   4 llalaeallalGdpdeAiallrralalaPddaea 37 
                 + + ++al  lGd+ +A a++++ l+ + ++a++
  EPX70975.1  73 WSRKGAALHGLGDLTAAKAAFEEGLKFDSNNAQL 106
                 778899999*****************99888776 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.1
      TPR_14   7 laeallalGdpdeAiallrralalaPd 33 
                 la+a+++++++d  +  +++a++++ d
  EPX70975.1 297 LAAAYYEADELDNCESTCKEAIEQGRD 323
                 89*********************8765 PP

  == domain 4  score: 9.6 bits;  conditional E-value: 0.0022
      TPR_14   3 allalaeallalGdpdeAiallrralala 31 
                 al +l+  +  +Gd++ Ai++++r l  +
  EPX70975.1 334 ALGRLGTTYQKRGDLANAIEYFQRSLTEH 362
                 67789999****************99865 PP

  == domain 5  score: 11.9 bits;  conditional E-value: 0.00038
      TPR_14   8 aeallalGdpdeAiallrralalaPddaea 37 
                 +  l+ +Gd+++Ai+ + ++ ++aP+d++ 
  EPX70975.1 399 GNDLFKAGDFAGAIKEYTEMTKRAPTDPRG 428
                 566899*********************985 PP

  == domain 6  score: 6.2 bits;  conditional E-value: 0.026
      TPR_14   8 aeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 a+a+l    p+e+i+ ++ a++l+P++a a+ + aq
  EPX70975.1 433 AAAYLKVMAPAESIRDCNHAIQLDPTFAKAYVRKAQ 468
                 6666666679999*********************99 PP

  == domain 7  score: 4.1 bits;  conditional E-value: 0.12
      TPR_14   2 eallalaeallalGdpdeAiallrralal 30 
                 +a+ + a+al+ l d+ + i+++++a + 
  EPX70975.1 461 KAYVRKAQALFMLKDYGKCIDACNAAADV 489
                 688899*******************9775 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   0.4    0.0019       1.6       2      34 .]      25      57 ..      24      57 .. 0.93
   2 ?    2.5   0.0      0.27   2.3e+02       3      33 ..      60      90 ..      58      91 .. 0.92
   3 ?    2.9   0.0       0.2   1.7e+02       2      18 ..      93     109 ..      92     110 .. 0.88
   4 ?    3.3   0.2      0.15   1.3e+02      15      33 ..     293     311 ..     289     312 .. 0.84
   5 !    7.1   0.0    0.0093       7.9      13      34 .]     332     353 ..     313     353 .. 0.87
   6 ?    1.3   0.0      0.67   5.7e+02       2      25 ..     415     438 ..     414     440 .. 0.88
   7 !   16.3   0.0   1.1e-05    0.0092       2      33 ..     449     480 ..     448     481 .. 0.93

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.0019
      TPR_17  2 ylkaleldPnnadaynnLAelllknGdlmtArq 34
                + +a++ld nn  +y n+  ++++ +d++ A++
  EPX70975.1 25 FSQAIQLDGNNHILYSNRSACYASVKDYKNALE 57
                679*************************99975 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.27
      TPR_17  3 lkaleldPnnadaynnLAelllknGdlmtAr 33
                +k+ ++ ++ a+ +  ++ +l+ +Gdl  A+
  EPX70975.1 60 TKCTDIKHDWAKGWSRKGAALHGLGDLTAAK 90
                79999*********************99886 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.2
      TPR_17   2 ylkaleldPnnadaynn 18 
                 +++ l+ d nna ++n 
  EPX70975.1  93 FEEGLKFDSNNAQLLNG 109
                 899**********9986 PP

  == domain 4  score: 3.3 bits;  conditional E-value: 0.15
      TPR_17  15 aynnLAelllknGdlmtAr 33 
                  +nnLA +++++ +l+ ++
  EPX70975.1 293 YLNNLAAAYYEADELDNCE 311
                 58*********99998775 PP

  == domain 5  score: 7.1 bits;  conditional E-value: 0.0093
      TPR_17  13 adaynnLAelllknGdlmtArq 34 
                 a+a+  L++++ k+Gdl+ A++
  EPX70975.1 332 AKALGRLGTTYQKRGDLANAIE 353
                 789999***********99985 PP

  == domain 6  score: 1.3 bits;  conditional E-value: 0.67
      TPR_17   2 ylkaleldPnnadaynnLAelllk 25 
                 y++  ++ P+++  + n+A ++lk
  EPX70975.1 415 YTEMTKRAPTDPRGFGNRAAAYLK 438
                 77778999*************986 PP

  == domain 7  score: 16.3 bits;  conditional E-value: 1.1e-05
      TPR_17   2 ylkaleldPnnadaynnLAelllknGdlmtAr 33 
                 +  a++ldP+ a+ay  +A++l +++d+++++
  EPX70975.1 449 CNHAIQLDPTFAKAYVRKAQALFMLKDYGKCI 480
                 5789************************9986 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0    0.0031       2.6       4      29 ..       7      32 ..       5      43 .. 0.83
   2 ?   -1.4   0.0       3.7   3.1e+03       4      20 ..      41      57 ..      38      61 .. 0.79
   3 ?   -1.1   0.0       2.9   2.5e+03      14      24 ..     273     283 ..     270     290 .. 0.77
   4 ?   -0.4   0.2       1.8   1.5e+03       2      17 ..     294     309 ..     293     324 .. 0.68
   5 !   24.4   0.0   2.1e-08   1.8e-05       1      34 [.     334     367 ..     334     369 .. 0.92
   6 ?    3.6   0.0     0.097        83      10      35 ..     403     426 ..     397     427 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0031
       TPR_7  4 nLarlysrlGdyeeAielyeqsLalt 29
                + +++ +++ dy++Ai+++ q+++l+
  EPX70975.1  7 AKGNAAFAQKDYKTAIDYFSQAIQLD 32
                568999999************65554 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 3.7
       TPR_7  4 nLarlysrlGdyeeAie 20
                n   +y ++ dy++A+e
  EPX70975.1 41 NRSACYASVKDYKNALE 57
                5556799999***9987 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 2.9
       TPR_7  14 dyeeAielyeq 24 
                 ++  Aie+y++
  EPX70975.1 273 NFPVAIEHYKK 283
                 66679999998 PP

  == domain 4  score: -0.4 bits;  conditional E-value: 1.8
       TPR_7   2 LlnLarlysrlGdyee 17 
                 L+nLa +y +  + ++
  EPX70975.1 294 LNNLAAAYYEADELDN 309
                 7899999877666665 PP

  == domain 5  score: 24.4 bits;  conditional E-value: 2.1e-08
       TPR_7   1 aLlnLarlysrlGdyeeAielyeqsLaltkdped 34 
                 aL +L+ +y+++Gd ++Aie++++sL  +++p++
  EPX70975.1 334 ALGRLGTTYQKRGDLANAIEYFQRSLTEHRSPDI 367
                 799*********************9988888876 PP

  == domain 6  score: 3.6 bits;  conditional E-value: 0.097
       TPR_7  10 srlGdyeeAielyeqsLaltkdpeda 35 
                 ++ Gd++ Ai+ y++   + ++p+d+
  EPX70975.1 403 FKAGDFAGAIKEYTE--MTKRAPTDP 426
                 688************..999999887 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.1   7.3e-06    0.0062       2      55 ..       7      58 ..       6      61 .. 0.94
   2 ?    2.8   0.2      0.22   1.9e+02       9      32 ..      82     102 ..      73     119 .. 0.58
   3 ?   -0.6   0.5       2.5   2.1e+03      14      34 ..     202     222 ..     198     223 .. 0.76
   4 ?   -1.7   0.1       5.9     5e+03      10      27 ..     271     288 ..     265     309 .. 0.50
   5 !   10.1   0.1    0.0012         1      23      61 ..     324     359 ..     315     366 .. 0.71
   6 !   17.0   0.1   8.1e-06    0.0069       2      38 ..     397     437 ..     396     441 .. 0.88
   7 ?    4.9   0.0     0.049        42      31      66 ..     457     492 ..     442     494 .. 0.85

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 7.3e-06
      TPR_16  2 alaraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAa.a 55
                a+++aa++++dy  A+ ++ +a+ +d     ++  + ++  +++  ++++ A+ +
  EPX70975.1  7 AKGNAAFAQKDYKTAIDYFSQAIQLD---GNNHILYSNRSACYASVKDYKNALeD 58
                689***********************...9**********************944 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.22
      TPR_16   9 ragdyddAaaaleaalkrdpssPd 32 
                  +gd ++A aa+e+ lk d   + 
  EPX70975.1  82 GLGDLTAAKAAFEEGLKFD---SN 102
                 3455555555555555544...44 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 2.5
      TPR_16  14 ddAaaaleaalkrdpssPdaa 34 
                 d+Aa+a eaa  + ps P++a
  EPX70975.1 202 DAAANANEAASSSEPSQPETA 222
                 566666699999999999876 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 5.9
      TPR_16  10 agdyddAaaaleaalkrd 27 
                  ++++ A++ ++ a + +
  EPX70975.1 271 KRNFPVAIEHYKKAWETY 288
                 556666666655443333 PP

  == domain 5  score: 10.1 bits;  conditional E-value: 0.0012
      TPR_16  23 alkrdpssPdaaeAllllgdaalrqgrlaeAaalyraal 61 
                 +++++    + a Al  lg  + ++g+la A++++++ l
  EPX70975.1 324 LRADF---KLIAKALGRLGTTYQKRGDLANAIEYFQRSL 359
                 44444...7788899999999999999999999999987 PP

  == domain 6  score: 17.0 bits;  conditional E-value: 8.1e-06
      TPR_16   2 alaraalragdyddAaaaleaalkrdpssPd....aaeAll 38 
                 a+++++++agd++ A++ +++ +kr+p +P+    +a+A+l
  EPX70975.1 397 AKGNDLFKAGDFAGAIKEYTEMTKRAPTDPRgfgnRAAAYL 437
                 689***************************99985555554 PP

  == domain 7  score: 4.9 bits;  conditional E-value: 0.049
      TPR_16  31 PdaaeAllllgdaalrqgrlaeAaalyraalraapd 66 
                 P  a A+  +++a++ ++++ + +++++aa++ + +
  EPX70975.1 457 PTFAKAYVRKAQALFMLKDYGKCIDACNAAADVDRK 492
                 66789****************999999999876655 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.61   5.2e+02      34      64 ..       7      37 ..       2      44 .. 0.78
   2 !    8.3   0.0     0.003       2.6       3      54 ..      44      95 ..      42     107 .. 0.91
   3 ?    3.4   0.0       0.1        85      36      58 ..     339     361 ..     334     374 .. 0.79
   4 !    9.1   0.0    0.0017       1.4      18      63 ..     381     426 ..     367     427 .. 0.89
   5 !   11.4   0.0   0.00032      0.27       8      67 ..     405     464 ..     402     475 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.61
       TPR_9 34 dRGlllaqlGclsaAladLeaylalapdapd 64
                  G + + + ++++A++ + ++++l+++++ 
  EPX70975.1  7 AKGNAAFAQKDYKTAIDYFSQAIQLDGNNHI 37
                5677778888999999999999999987765 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.003
       TPR_9  3 aiaireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLea 54
                a++++ +d+  al+ +     +++d +  +   G +l+ lG+l aA a++e 
  EPX70975.1 44 ACYASVKDYKNALEDATKCTDIKHDWAKGWSRKGAALHGLGDLTAAKAAFEE 95
                679999*******************************************996 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.1
       TPR_9  36 GlllaqlGclsaAladLeaylal 58 
                 G  ++++G+l+ A++ +++ l  
  EPX70975.1 339 GTTYQKRGDLANAIEYFQRSLTE 361
                 778999**********9998844 PP

  == domain 4  score: 9.1 bits;  conditional E-value: 0.0017
       TPR_9  18 verllllaPddpeerrdRGlllaqlGclsaAladLeaylalapdap 63 
                 ++r  +++P  ++e r  G  l++ G++++A+++   +   ap +p
  EPX70975.1 381 IDRESYIDPAKADEARAKGNDLFKAGDFAGAIKEYTEMTKRAPTDP 426
                 7777899**********************************99987 PP

  == domain 5  score: 11.4 bits;  conditional E-value: 0.00032
       TPR_9   8 eedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapdapdaea 67 
                 + d++ a++ +  +   aP dp+    R+ ++ ++ ++++ ++d +++++l+p  + a+ 
  EPX70975.1 405 AGDFAGAIKEYTEMTKRAPTDPRGFGNRAAAYLKVMAPAESIRDCNHAIQLDPTFAKAYV 464
                 67888889999999999************************************6655554 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.52   4.5e+02       9      30 ..       9      30 ..       8      31 .. 0.92
   2 ?   -1.4   0.0       2.9   2.5e+03      10      28 ..      44      62 ..      39      66 .. 0.74
   3 ?    1.0   0.0      0.49   4.2e+02       9      29 ..      77      97 ..      76      99 .. 0.90
   4 ?    0.4   0.0      0.74   6.4e+02      16      33 ..     272     289 ..     265     292 .. 0.83
   5 !    9.7   0.7   0.00092      0.78       3      29 ..     292     318 ..     291     319 .. 0.85
   6 !   14.9   0.1   2.2e-05     0.019       2      33 ..     332     363 ..     331     364 .. 0.90
   7 ?   -2.7   0.0       7.2   6.1e+03       9      25 ..     399     415 ..     399     417 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.52
      TPR_10  9 analrqrgrydeAealleeala 30
                +na +++++y+ A +++ +a++
  EPX70975.1  9 GNAAFAQKDYKTAIDYFSQAIQ 30
                79999************99998 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 2.9
      TPR_10 10 nalrqrgrydeAealleea 28
                + + ++++y+ A++++ ++
  EPX70975.1 44 ACYASVKDYKNALEDATKC 62
                5588899999999987666 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.49
      TPR_10  9 analrqrgrydeAealleeal 29
                ++al+ +g++++A a +ee l
  EPX70975.1 77 GAALHGLGDLTAAKAAFEEGL 97
                789**************9966 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.74
      TPR_10  16 grydeAealleealairr 33 
                 +++  A +++++a ++++
  EPX70975.1 272 RNFPVAIEHYKKAWETYK 289
                 67777999*********8 PP

  == domain 5  score: 9.7 bits;  conditional E-value: 0.00092
      TPR_10   3 sslnNLanalrqrgrydeAealleeal 29 
                 + lnNLa+a+++  ++d  e  ++ea+
  EPX70975.1 292 TYLNNLAAAYYEADELDNCESTCKEAI 318
                 679************999887777776 PP

  == domain 6  score: 14.9 bits;  conditional E-value: 2.2e-05
      TPR_10   2 AsslnNLanalrqrgrydeAealleealairr 33 
                 A +l  L+ ++++rg+++ A ++++++l  +r
  EPX70975.1 332 AKALGRLGTTYQKRGDLANAIEYFQRSLTEHR 363
                 778999*********************98665 PP

  == domain 7  score: -2.7 bits;  conditional E-value: 7.2
      TPR_10   9 analrqrgrydeAeall 25 
                 +n l++ g++++A + +
  EPX70975.1 399 GNDLFKAGDFAGAIKEY 415
                 788999******98765 PP

>> RPN7  26S proteasome subunit RPN7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.46     4e+02     118     158 ..       7      47 ..       5      49 .. 0.76
   2 ?    4.0   0.1     0.043        37       6      63 ..      39      97 ..      34     113 .. 0.84
   3 !    6.9   0.0    0.0055       4.7      35      65 ..     331     361 ..     329     370 .. 0.86
   4 !   11.0   0.3   0.00029      0.25      14      64 ..     372     420 ..     366     425 .. 0.93

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.46
                 HHHHHHHHTT-HHHHHHHHCTS-GGGT.TTT--HHHHHHHH CS
        RPN7 118 yeGlallairkfkeAaellldilstftskellsyedlavya 158
                 ++G a+ a++++k+A + + ++    +++ +l +++ a ya
  EPX70975.1   7 AKGNAAFAQKDYKTAIDYFSQAIQLDGNNHILYSNRSACYA 47 
                 67889999*******99999988766666666666666665 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.043
                HHHHHHHHHHHHHHHHHHHHHH.HTT-HHHHHHHHHHHHHHHHHCT-HHHHHHHHHTCC CS
        RPN7  6 eelrkknekeleeLdaelkdak.enlgkeeirrakldlaehYlkigdleeAlkaysrir 63
                 ++r +  + +++ ++ l+da   + +k + ++++ +++   +  gdl+ A +a+++ +
  EPX70975.1 39 YSNRSACYASVKDYKNALEDATkCTDIKHDWAKGWSRKGAALHGLGDLTAAKAAFEEGL 97
                56777777889999999**999789*****************************99855 PP

  == domain 3  score: 6.9 bits;  conditional E-value: 0.0055
                 HHHHHHHHHHHHHHCT-HHHHHHHHHTCCCC CS
        RPN7  35 irrakldlaehYlkigdleeAlkaysrirey 65 
                 i++a  +l+  Y k gdl++A+++++r + +
  EPX70975.1 331 IAKALGRLGTTYQKRGDLANAIEYFQRSLTE 361
                 6788999*******************97665 PP

  == domain 4  score: 11.0 bits;  conditional E-value: 0.00029
                 HHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHCT-HHHHHHHHHTCCC CS
        RPN7  14 keleeLdaelkdakenlgkeeirrakldlaehYlkigdleeAlkaysrire 64 
                 ke+e+L++++++  e +++   ++   ++++  +k+gd++ A+k y ++ +
  EPX70975.1 372 KEVEKLKEKIDR--ESYIDPAKADEARAKGNDLFKAGDFAGAIKEYTEMTK 420
                 89*********9..*********************************9865 PP

>> TPR_3  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   1.1   0.00052      0.45      12      36 .]      13      35 ..       3      35 .. 0.82
   2 ?   -2.0   0.2       4.6   3.9e+03       7      16 ..     297     306 ..     293     308 .. 0.72
   3 ?    5.7   0.0     0.018        15       7      25 ..     338     356 ..     335     360 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00052
                HHTT-HHHHHHH..HHHHHHH-TT- CS
       TPR_3 12 ynkkkyqeArelfsYallaildken 36
                + +k+y +A+++fs  ++  ld +n
  EPX70975.1 13 FAQKDYKTAIDYFS--QAIQLDGNN 35
                78**********99..998887665 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 4.6
                 HHHHHHHTT- CS
       TPR_3   7 yAaefynkkk 16 
                 +Aa++y  ++
  EPX70975.1 297 LAAAYYEADE 306
                 8999998665 PP

  == domain 3  score: 5.7 bits;  conditional E-value: 0.018
                 HHHHHHHTT-HHHHHHH.. CS
       TPR_3   7 yAaefynkkkyqeArelfs 25 
                 ++ +++  +++  A+e+f+
  EPX70975.1 338 LGTTYQKRGDLANAIEYFQ 356
                 6779*************99 PP

>> TPR_MalT  MalT-like TPR region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       4.1   3.5e+03      91     109 ..      13      31 ..       8      61 .. 0.59
   2 ?   -2.4   0.0       2.8   2.3e+03      47      65 ..      77      95 ..      74     106 .. 0.74
   3 ?   12.1   0.0   0.00011     0.092     123     187 ..     292     358 ..     270     377 .. 0.65

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 4.1
    TPR_MalT  91 vaqGrLheAletyeqalql 109
                 +aq + + A++ + qa+ql
  EPX70975.1  13 FAQKDYKTAIDYFSQAIQL 31 
                 3333333444444444443 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 2.8
    TPR_MalT 47 GeasllqGdleaAlqalqe 65
                G a +  Gdl+aA +a++e
  EPX70975.1 77 GAALHGLGDLTAAKAAFEE 95
                6677778888888888776 PP

  == domain 3  score: 12.1 bits;  conditional E-value: 0.00011
    TPR_MalT 123 fllvlladllyEwndLeeAeqhlqeGielleql.ep.eaaldayvllarialaqGdleeAetlleka 187
                  +l  la  +yE  +L+  e  ++e+ie +++l    + +++a+  l   ++ +Gdl +A +++++ 
  EPX70975.1 292 TYLNNLAAAYYEADELDNCESTCKEAIEQGRDLrADfKLIAKALGRLGTTYQKRGDLANAIEYFQRS 358
                 3455567777777777777777777777777774223555567777777777777777777777764 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.1     0.019        16       7      28 ..       9      30 ..       8      35 .. 0.87
   2 ?    0.9   0.0         1   8.9e+02      11      24 ..      81      94 ..      72      95 .. 0.74
   3 ?   -1.5   0.1       6.3   5.4e+03       6      25 ..     297     316 ..     296     320 .. 0.70
   4 ?   11.2   0.1   0.00054      0.46       5      28 ..     337     360 ..     334     363 .. 0.88
   5 ?    1.8   0.1      0.53   4.6e+02      10      32 ..     402     424 ..     390     425 .. 0.88
   6 ?    1.9   0.1      0.51   4.3e+02       2      26 ..     462     489 ..     461     496 .. 0.66

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.019
                HHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6  7 alsyrklgdtdkAlealerlik 28
                + + ++++d+ +A++++ + i+
  EPX70975.1  9 GNAAFAQKDYKTAIDYFSQAIQ 30
                66889999***********998 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 1
                HHHHHHHHHHHHHH CS
       TPR_6 11 rklgdtdkAleale 24
                  lgd ++A++a+e
  EPX70975.1 81 HGLGDLTAAKAAFE 94
                3369*********8 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 6.3
                 HHHHHHHHHHHHHHHHHHHH CS
       TPR_6   6 lalsyrklgdtdkAlealer 25 
                 la +y+++++ d+   + ++
  EPX70975.1 297 LAAAYYEADELDNCESTCKE 316
                 89999999888876665555 PP

  == domain 4  score: 11.2 bits;  conditional E-value: 0.00054
                 HHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   5 klalsyrklgdtdkAlealerlik 28 
                 +l+  y+k gd ++A+e+++r ++
  EPX70975.1 337 RLGTTYQKRGDLANAIEYFQRSLT 360
                 79******99**********9665 PP

  == domain 5  score: 1.8 bits;  conditional E-value: 0.53
                 HHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6  10 yrklgdtdkAlealerlikeYPd 32 
                 ++k+gd + A++ + +  k+ P+
  EPX70975.1 402 LFKAGDFAGAIKEYTEMTKRAPT 424
                 46779**********99999985 PP

  == domain 6  score: 1.9 bits;  conditional E-value: 0.51
                 HHHHHHHHHHHHHHHHHHHH...HHHHH CS
       TPR_6   2 AlyklalsyrklgdtdkAle...alerl 26 
                 A+ + a+++++l+d+ k ++   a  ++
  EPX70975.1 462 AYVRKAQALFMLKDYGKCIDacnAAADV 489
                 889999****998888666622255555 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   2.1    0.0019       1.6      24      76 ..       3      56 ..       1      62 [. 0.75
   2 ?    1.8   0.7      0.33   2.8e+02      24      65 ..     289     334 ..     267     340 .. 0.62
   3 ?    1.4   0.0      0.43   3.7e+02      29      55 ..     338     364 ..     332     374 .. 0.81
   4 ?   -0.1   0.0       1.3   1.1e+03      20      48 ..     389     417 ..     344     438 .. 0.64
   5 ?    5.9   0.0     0.017        14      24      49 ..     461     486 ..     445     496 .. 0.76

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.0019
                HHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHH.HTT-HHHHH CS
      ANAPC3 24 edayllAlclylngqykrAyellrka.klnskslgcrylfAqcll.kLkkyeeAi 76
                ed+ +++ + + +++yk+A++++++a +l+++++ ++y    +++   k y+ A+
  EPX70975.1  3 EDLKAKGNAAFAQKDYKTAIDYFSQAiQLDGNNH-ILYSNRSACYaSVKDYKNAL 56
                7777889999****************77777765.44444455552558888776 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.33
                 HHHHH...HHHHHHHTT-HHHHHHHHHCTSHHHC-H.HHHHHHHHH CS
      ANAPC3  24 edayl...lAlclylngqykrAyellrkaklnsksl.gcrylfAqc 65 
                 +d+ +   lA ++y++ + + +   +++a +++++l +   l+A++
  EPX70975.1 289 KDITYlnnLAAAYYEADELDNCESTCKEAIEQGRDLrADFKLIAKA 334
                 3433313368889999998888888888844444442555566665 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.43
                 HHHHHHHTT-HHHHHHHHHCTSHHHC- CS
      ANAPC3  29 lAlclylngqykrAyellrkaklnsks 55 
                 l+ ++ ++g+   A+e+++++ ++++s
  EPX70975.1 338 LGTTYQKRGDLANAIEYFQRSLTEHRS 364
                 578899999999**9999999555555 PP

  == domain 4  score: -0.1 bits;  conditional E-value: 1.3
                 H--HHHHHHHHHHHHHTT-HHHHHHHHHC CS
      ANAPC3  20 tespedayllAlclylngqykrAyellrk 48 
                 +  ++ a +++  l+++g++  A++ + +
  EPX70975.1 389 PAKADEARAKGNDLFKAGDFAGAIKEYTE 417
                 44445555566677777777777765555 PP

  == domain 5  score: 5.9 bits;  conditional E-value: 0.017
                 HHHHHHHHHHHHTT-HHHHHHHHHCT CS
      ANAPC3  24 edayllAlclylngqykrAyellrka 49 
                 ++   +A++l+ +++y ++++ ++ a
  EPX70975.1 461 KAYVRKAQALFMLKDYGKCIDACNAA 486
                 44444799999999999999998877 PP

>> DUF3808  Protein of unknown function (DUF3808)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.1   0.00099      0.84     275     341 ..       8      70 ..       5      91 .. 0.86
   2 ?    1.1   0.3      0.15   1.3e+02     279     342 ..     252     315 ..     247     318 .. 0.69
   3 ?   -1.2   0.1      0.74   6.3e+02     128     174 ..     505     580 ..     495     582 .. 0.64

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00099
     DUF3808 275 earieslkgnldeAlelleeiieesqselkqvkhlclfelaltlvylheykeaaesfleLlkls.kwS 341
                 ++ + +++++ ++A+++++++i     +l   +h+++ +++ +++  ++yk+a+e+++++ ++  +w 
  EPX70975.1   8 KGNAAFAQKDYKTAIDYFSQAI-----QLDGNNHILYSNRSACYASVKDYKNALEDATKCTDIKhDWA 70 
                 5677888999999999999877.....677779***************************99852455 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.15
     DUF3808 279 eslkgnldeAlelleeiieesqselkqvkhl.clfelaltlvylheykeaaesfleLlklskwSk 342
                 e+l ++ deA ++ +e + ++++    ++h    +e+    +yl +   a+ +++eL ++ + +k
  EPX70975.1 252 EALRKKADEAKQVGNENY-KKRNFPVAIEHYkKAWETYKDITYLNNLAAAYYEADELDNCESTCK 315
                 667777788888888777.4444444555542678888888888888888888888888777665 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 0.74
     DUF3808 128 qiykeilkeikklekkkrskt...........................eeeeesllseekn..sqaeideflesGv 174
                 + ++++++ + +  +++++++                            e++++l+++ k+  ++++id+ + sGv
  EPX70975.1 505 SQLQKCMNAMAAQRQNETEEEtmariqndpevlailqdpamqailgqaRENPAALMEHMKSpaVKSKIDKLIASGV 580
                 5567777766644433333336777888888888888888888888774555554555555667888888888887 PP

>> MIT  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   1.2   8.3e-05     0.071      12      58 ..       3      54 ..       1      59 [. 0.78
   2 ?    2.5   0.1      0.18   1.5e+02      16      32 ..     270     286 ..     265     291 .. 0.87
   3 ?    2.7   0.1      0.16   1.4e+02      21      40 ..     349     361 ..     332     387 .. 0.57
   4 ?   -2.4   0.0       6.2   5.3e+03      16      29 ..     404     417 ..     404     417 .. 0.87
   5 ?    0.1   0.0         1   8.7e+02      26      58 ..     475     512 ..     473     520 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 8.3e-05
         MIT 12 veeDnagnyeeAlelYkealelLlqalk.e.kne...errellrekieeYle 58
                 ++  +gn + A + Yk+a+++++qa++   +n    + r +  + ++ Y +
  EPX70975.1  3 EDLKAKGNAAFAQKDYKTAIDYFSQAIQlDgNNHilySNRSACYASVKDYKN 54
                55667899999*****************766665777777777777777766 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.18
         MIT  16 nagnyeeAlelYkeale 32 
                 ++ n++ A+e Yk+a e
  EPX70975.1 270 KKRNFPVAIEHYKKAWE 286
                 578999********976 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.16
         MIT  21 eeAlelYkealelLlqalke 40 
                 +        a+e+++  l+e
  EPX70975.1 349 AN-------AIEYFQRSLTE 361
                 44.......55666666654 PP

  == domain 4  score: -2.4 bits;  conditional E-value: 6.2
         MIT  16 nagnyeeAlelYke 29 
                 +ag+++ A++ Y+e
  EPX70975.1 404 KAGDFAGAIKEYTE 417
                 5899******9986 PP

  == domain 5  score: 0.1 bits;  conditional E-value: 1
         MIT  26 lYkealelLlqalk.e.kne...errellrekieeYle 58 
                  Y ++++ ++ a     k++   +    + ++++++++
  EPX70975.1 475 DYGKCIDACNAAADvDrKEPnsgKNIREIDSQLQKCMN 512
                 59999999999999866766555666666667777666 PP

>> DUF3391  Domain of unknown function (DUF3391)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   4.0    0.0052       4.5      65     124 ..     219     327 ..     198     331 .. 0.60
   2 ?    3.5   2.4      0.11        96      33      68 ..     367     402 ..     352     565 .. 0.80

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0052
     DUF3391  65 gldvpaaeaaeeakaaeesaeleeekqerperleaere.....................................................eleraekl 110
                 ++++p++e ++e++a++ +++++ e+ e+ +++    e                                                     el ++e  
  EPX70975.1 219 PETAPKEETKPEPAAQPMEEDKTPEEIEENASQ----EalrkkadeakqvgnenykkrnfpvaiehykkawetykditylnnlaaayyeadELDNCEST 313
                 222222222222222222222221111111111....12223455667789999999999998888888888888888888888888888888888888 PP

     DUF3391 111 yeeakqlvrslfsd 124
                 ++ea ++ r+l +d
  EPX70975.1 314 CKEAIEQGRDLRAD 327
                 88888877776655 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.11
     DUF3391  33 likseadierLrasgiqeVwidtdksdeeelagldv 68 
                 +++  +++e+L+++  +e +id++k de+  +g d 
  EPX70975.1 367 ILTKLKEVEKLKEKIDRESYIDPAKADEARAKGNDL 402
                 688899********99*********99999998854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (584 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1424  (0.0794244); expected 358.6 (0.02)
Passed bias filter:                      672  (0.0374812); expected 358.6 (0.02)
Passed Vit filter:                        77  (0.00429472); expected 17.9 (0.001)
Passed Fwd filter:                        25  (0.00139439); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              21  [number of targets reported over threshold]
# CPU time: 0.76u 0.33s 00:00:01.09 Elapsed: 00:00:00.52
# Mc/sec: 3380.15
//
Query:       EPX70976.1  [L=472]
Description: oxysterol binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      5e-85  285.6   0.1    1.7e-75  254.2   0.0    2.0  2  Oxysterol_BP  Oxysterol-binding protein


Domain annotation for each model (and alignments):
>> Oxysterol_BP  Oxysterol-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  254.2   0.0   9.5e-80   1.7e-75       2     272 ..      24     310 ..      23     317 .. 0.93
   2 !   27.1   2.7   9.5e-11   1.7e-06     316     356 ..     316     357 ..     312     371 .. 0.83

  Alignments for each domain:
  == domain 1  score: 254.2 bits;  conditional E-value: 9.5e-80
                   HHCCHTTSTT-BCCCS---GGGEEEEEHHHHHHHCCTTCHHHHHHHC.SSHHHHHHHHHHHHHHCCCGCTSTSSSEEE---TT-EEEEEETT..... CS
  Oxysterol_BP   2 lwsilkkciGkDLskislPvffneplSlLqrlaedleyselLdkaakeddsleRlayVaaFalSsyastikrrlkKPFNPlLGEtfelvred..... 93 
                   ++s+l+  +++DLsk++lP+f++ep S+L+r+++++ ++e L ++ +  ++ eR++ V++F+lS+++ ++   +kKP+NP+LGEtf+  ++      
    EPX70976.1  24 IVSQLR--PNMDLSKVTLPTFVLEPKSMLERITNFMSHPEFLLTVPQVPSAEERFLDVCRFYLSGWHIRP-PGVKKPLNPVLGETFTGFWKFppagp 117
                   679999..***************************************998********************.799****************5567777 PP

                   .........CEEEEEEEEEETTTTEEEEEEEE..CTEEEEEEEEEEEEE-SSEEEEEE-SEEEEEEEEESEEEEEEE--EEEEE-TTTTS-EEEEEE CS
  Oxysterol_BP  94 .........kgfrfiaEQVsHhPpvsAfhaes..egweldgeikvkskflgkslevkpeGtahlellkksgehYtwtkpttivhniivgklwvelsg 179
                             +  +i+EQVsHhPp+sA+++ +   ++++dg +k++s+flg+s+  ++eG+a++++l+ ++e+Y +t+p++++++i++gk+ +el++
    EPX70976.1 118 sspglenlnGTAVYISEQVSHHPPISAYFYYCpqYKIRVDGVLKPRSRFLGNSAASIMEGVATMKFLE-RNEEYILTQPNMYARGILFGKMRIELGD 213
                   7776666654449***************99996678999***************************65.9*************************** PP

                   EEEEEETTT--EEEEEEE---SSS---SSEEEEEEEE.TTS-EEEEEEEETTTEEEEEETTSTTS--EEEEETT-....BSXXGCGSSTTBCCCCCC CS
  Oxysterol_BP 180 eveitnhstgdkakleFkkkglfsskksnkvegkvkd.kkkevlyeisGkwdeelyikkkktekkeeeedaseks....kvkekeeqeefeseklWk 271
                   +v+++  +t+  a++eFk kg++ s+++n++ gkvk+ +++evly++sGkwd+e+ +++++t+k+++  d++e      ++++ eeq   es+klW 
    EPX70976.1 214 HVTVRCPNTDLAADIEFKVKGFI-SGTYNSIAGKVKRiSTGEVLYKLSGKWDSEIILENASTGKSSTFLDVTELPvypiTSRPLEEQAPYESQKLWY 309
                   *****999*************99.59**********99******************************99999934567*****************7 PP

                   H CS
  Oxysterol_BP 272 a 272
                   +
    EPX70976.1 310 E 310
                   6 PP

  == domain 2  score: 27.1 bits;  conditional E-value: 9.5e-11
                   HTT-HHHHHHHHHHHHHHHHHHHHHHCCTT.----SSEEEEE CS
  Oxysterol_BP 316 eegdideAeeeKkrlEekQRerrkereekk.ewkpkwFekek 356
                   +++d++ A++ K+ +E++QRe++k+re+++ +w+p++F+++ 
    EPX70976.1 316 KARDQSLATKSKTAIEDSQREKAKAREANGeKWQPRFFKQTG 357
                   67899*********************766647******8765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (472 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       382  (0.0213063); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.30s 00:00:00.86 Elapsed: 00:00:00.49
# Mc/sec: 2919.58
//
Query:       EPX70977.1  [L=115]
Description: hypothetical protein SOCG_01198 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-06   29.2  19.8    1.6e-06   28.9  19.8    1.1  1  Alb1      Alb1
  ------ inclusion threshold ------
       0.15   11.6   3.9       0.18   11.3   3.9    1.1  1  DUF1974   Domain of unknown function (DUF1974)
        1.7    8.5  10.5       0.13   12.1   4.3    2.3  3  DUF4748   Domain of unknown function (DUF4748)


Domain annotation for each model (and alignments):
>> Alb1  Alb1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.9  19.8   2.6e-10   1.6e-06       2     101 ..       8     114 ..       7     115 .] 0.66

  Alignments for each domain:
  == domain 1  score: 28.9 bits;  conditional E-value: 2.6e-10
        Alb1   2 hSRAarr...aespslnldkslkslprpektdre.....rtavlnealsagiskkkkkkkklskklrlrqekgle...raeavterlekKieksisrak 89 
                 +SR+ rr   ae++ ++  ++ ++ p++ k+ ++      +    ++ ++g+sk    kk+++k+++++++++le   +a+a  erle+K++k+ +++ 
  EPX70977.1   8 RSRNFRRsdpAEDDRIERYSTGEEKPQSVKERVSkeiatIALRSGNSGENGVSK----KKRQKKDVNKNRKEKLEaamKAQAREERLETKVSKAQKKHE 102
                 8******55444445555555555555444444344322111223335566666....66777777777777777555888888*************** PP

        Alb1  90 yvqeRkagwDei 101
                 + ++R++g De+
  EPX70977.1 103 KLKQRRKGDDEQ 114
                 ****99999986 PP

>> DUF1974  Domain of unknown function (DUF1974)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   3.9     3e-05      0.18     175     242 ..      34     103 ..      25     114 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 3e-05
     DUF1974 175 kkpsDklkhevaelllepseardrLtagvylpede..edplgrlekafkavlaaeplekklkkaikkgkl 242
                 +  ++++++e+a + l++++  ++ +++   ++++  +++ ++le+a+ka+ + e le k++ka+kk++ 
  EPX70977.1  34 QSVKERVSKEIATIALRSGNSGENGVSKKKRQKKDvnKNRKEKLEAAMKAQAREERLETKVSKAQKKHEK 103
                 567789999999999999999888777666666653357799************************8865 PP

>> DUF4748  Domain of unknown function (DUF4748)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0         1   6.2e+03      30      41 ..      21      32 ..      19      38 .. 0.63
   2 ?   12.1   4.3   2.1e-05      0.13      24      49 ..      66      91 ..      65      94 .. 0.90
   3 ?   -0.9   0.6      0.24   1.5e+03      40      43 ..      99     102 ..      85     114 .. 0.53

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 1
     DUF4748 30 dRaakleaerkr 41
                dR +++    ++
  EPX70977.1 21 DRIERYSTGEEK 32
                787777665554 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 2.1e-05
     DUF4748 24 KrsidadRaakleaerkrmrksnege 49
                K+ ++++R +klea++k +++ +++e
  EPX70977.1 66 KKDVNKNRKEKLEAAMKAQAREERLE 91
                9*************999999888877 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.24
     DUF4748  40 krmr 43 
                 k+ +
  EPX70977.1  99 KKHE 102
                 2222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2967  (0.165486); expected 358.6 (0.02)
Passed bias filter:                      628  (0.0350271); expected 358.6 (0.02)
Passed Vit filter:                        84  (0.00468515); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 780.14
//
Query:       EPX70978.1  [L=2803]
Description: ATM checkpoint kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.8e-51  174.0   0.1    1.6e-50  172.2   0.0    2.0  2  PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
    6.8e-26   91.2   1.3    1.8e-25   89.9   0.2    2.4  2  TAN             Telomere-length maintenance and DNA damage re
    3.6e-06   26.7   0.0    1.5e-05   24.7   0.0    2.2  1  FATC            FATC domain
  ------ inclusion threshold ------
      0.071   13.4   0.0       0.21   11.9   0.0    1.8  1  TPR_12          Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.4   6.4e+03      20     108 ..       3      93 ..       1     111 [. 0.68
   2 !  172.2   0.0   3.6e-54   1.6e-50       8     249 ..    2472    2711 ..    2467    2712 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.4
                     HHHHHHHHHHHHTTTTCCCT--.-----EEESSSSEEE.EE--TTEEEHHHHHHHHHHHCTTSTCHHHHHHHHHCHCHCCHHHHHCC...HHHH CS
  PI3_PI4_kinase  20 qvfklmdeelskennpkrrkla.lktysviplgrkcgi.ielvassetaaslldeklekkgvpptasveslrvaldkkklkkekklk...fekr 108
                     ++ k++de+ s++ ++++  +  l+ + +++  r+++   +++ +  ++++l + ++e+ +++ t  + s  +a  +++++k+++l    +e+ 
      EPX70978.1   3 GLAKILDEVSSQKIKTRNDAIEeLRAFIIYSRNRNELNgENCLTIQRIIERLFEVERET-NYQNTKRQVS--IAAINERFQKLSSLFrlyVESF 93 
                     68899999999999999888777888888888888887666666666666666666666.7777666666..5556666666666555555554 PP

  == domain 2  score: 172.2 bits;  conditional E-value: 3.6e-54
                      CSSCHHHHHHHHHHHHHHHHHHHHTTTTCCCT-------EEESSSSEEEEE--TTEEEHHHHHHHHHHHCTTSTCHHHHH...HHHHCHCHCC CS
  PI3_PI4_kinase    8 vgddlrqdelivqvfklmdeelskennpkrrklalktysviplgrkcgiielvassetaaslldeklekkgvpptasves...lrvaldkkkl 97  
                      ++ddlrqd ++ qvf+ ++  l++ +++ +rkl+++ty+vipl+ k g+ie+v ++ ++a  ld  ++   +p + s+++   l         
      EPX70978.1 2472 GNDDLRQDAVMEQVFEQVNGFLKNYRSTMQRKLSMRTYKVIPLALKTGVIEWVLNTVPLADYLDPAHKL-YYPKDWSLNVcrkL--------- 2554
                      579****************************************************************88.88888888884321......... PP

                      HHHHHCC.......HHHHHHTSSTTHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHT-TT--TTTEEEETTTSEEEESSTTTCCTCS CS
  PI3_PI4_kinase   98 kkekklk.......fekrtalkpksgllqeFvkkspsaeewlearkqFvrslaklsvldyilgngDRhldNilvdktsgklihIDfGlilpde 183 
                       +ek+++       ++   +  +  +  ++F +k+p++  w+e  +++ rs a+ svl+y+lg+gDRh++Nilvd tsg+++hID G+ + ++
      EPX70978.1 2555 IAEKQMEdtttrlkVFDLVCRHYHPVFRHFFFEKYPDPMVWFETQTNYSRSTAVASVLGYVLGLGDRHANNILVDVTSGQVVHIDLGITF-EQ 2646
                      2222222344444599999***********************************************************************.** PP

                      HCSSSS-.SSSSSS-THHHHHHTSTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCCSSC CS
  PI3_PI4_kinase  184 wkllpfpqekvPfrltrelvlaidpskdeglfresceealealrrdqnlltrllkkavkdglilwe 249 
                      +k+lp+p e vPfrltr++v+ ++ ++ eg fr+s+e +l++lr + + l+++l+   +d+l++w 
      EPX70978.1 2647 GKKLPVP-ECVPFRLTRDVVDGMGITGVEGVFRRSMEFTLKTLRNEVESLVSILEVLRYDPLFSWL 2711
                      *******.*******************************************************995 PP

>> TAN  Telomere-length maintenance and DNA damage repair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.9   0.2   3.9e-29   1.8e-25       1     151 []       4     151 ..       4     151 .. 0.96
   2 ?   -4.4   0.0         4   1.8e+04     112     137 ..     760     785 ..     756     787 .. 0.78

  Alignments for each domain:
  == domain 1  score: 89.9 bits;  conditional E-value: 3.9e-29
         TAN   1 lkealrlLssskikeRnkaldeLkhllsskrnktslsdlkdkawheifeaLfklvekEkeaylkkkkssttksaaasRLskaasalRllvekavsklkr 99 
                 l ++l+++ss+kik+Rn+a++eL+ ++ ++rn   +++l+++++ +i + + +l+e E+e+ ++++k + + +a ++R++k +s++Rl ve ++  + +
  EPX70978.1   4 LAKILDEVSSQKIKTRNDAIEELRAFIIYSRN---RNELNGENCLTIQRIIERLFEVERETNYQNTKRQVSIAAINERFQKLSSLFRLYVESFILIFPE 99 
                 5789**************************99...5699999999999999999999****99*999999999999*********************** PP

         TAN 100 ktlkalldhitqllpgpdgelleplaldyikaLrsllsvpphvehLskeqWe 151
                   +  ll  +++ +++p++++++p++ld+ k+L+ l+s+ phv+hL+  +W+
  EPX70978.1 100 SQIPTLLSFVRNFTFTPKDTICDPVCLDFGKSLHLLFSHSPHVQHLQFVDWQ 151
                 **************************************************96 PP

  == domain 2  score: -4.4 bits;  conditional E-value: 4
         TAN 112 llpgpdgelleplaldyikaLrslls 137
                 ++ ++++ l+ep+al ++++Lr  +s
  EPX70978.1 760 TFIKDSKVLVEPIALVLTSVLRFTIS 785
                 56667788999999999999987666 PP

>> FATC  FATC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.0   3.4e-09   1.5e-05       2      31 ..    2773    2802 ..    2772    2802 .. 0.98

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 3.4e-09
        FATC    2 LsveqQVdrLIkeATdpeNLaqmyiGWcPw 31  
                  Ls+e+ V +LI+ A dp  L+ m++GW+++
  EPX70978.1 2773 LSIEASVGELIRIAGDPGQLSLMFCGWSAF 2802
                  9****************************9 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   4.8e-05      0.21       6      73 ..    2034    2100 ..    2030    2103 .. 0.95

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 4.8e-05
      TPR_12    6 lnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleeala 73  
                  l + ++v++  g+++ Al+    +  ++++++ +d++    + +  +r++++ +++ +A+ ll+++l+
  EPX70978.1 2034 L-RNGEVYLLTGKLQLALSTAMSSESLYSEYFADDKDIRRKVDFLTSRILWEKKETSDAICLLKQSLD 2100
                  3.78**************************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2803 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       721  (0.0402142); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.27u 0.31s 00:00:01.58 Elapsed: 00:00:00.50
# Mc/sec: 16879.16
//
Query:       EPX70979.1  [L=732]
Description: sec14 cytosolic factor family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.4e-39  135.4   0.0      2e-39  134.8   0.0    1.3  1  CRAL_TRIO    CRAL/TRIO domain
    7.2e-12   45.3   0.3    1.5e-11   44.3   0.3    1.5  1  CRAL_TRIO_N  CRAL/TRIO, N-terminal domain
  ------ inclusion threshold ------
       0.19   11.9   0.0       0.33   11.1   0.0    1.3  1  CRAL_TRIO_2  Divergent CRAL/TRIO domain


Domain annotation for each model (and alignments):
>> CRAL_TRIO  CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.8   0.0   3.4e-43     2e-39       2     159 .]     443     588 ..     442     588 .. 0.96

  Alignments for each domain:
  == domain 1  score: 134.8 bits;  conditional E-value: 3.4e-43
   CRAL_TRIO   2 eileggkvgihgrDkegrpvlylrlgrfdpkklsleelvralvlvlerllkeleedgqvegvtvviDlkglslskmlwkp.isllkkilkilqdnyper 99 
                 e++ +gk++++g+Dk+grp+lyl +gr+++k++    ++r+lv+ le +++++++  +ve+++++i++k  s +  +++p +++ k++l+ilq++y er
  EPX70979.1 443 EENATGKQVLLGFDKDGRPCLYLYPGRQNTKTSP--LQIRHLVFSLECAIELMPP--GVETLALLINFKASS-N--RSNPsVGQGKEVLNILQTHYCER 534
                 78999**************************999..**************99999..***************.4..55588****************** PP

   CRAL_TRIO 100 lgkilivnaPklfkfafklvkpfldektreKikfvspsnteatlekyidpeqlpkelGGt 159
                 lgk+l++n+P+ ++ +fkl++pf+d+ treK+kf++p      le+y++ +ql  ++GG+
  EPX70979.1 535 LGKALVINIPWAVWGFFKLISPFIDPITREKLKFNEP------LERYVPMDQLDTNFGGS 588
                 ***********************************99......****************6 PP

>> CRAL_TRIO_N  CRAL/TRIO, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.3   0.3   2.5e-15   1.5e-11       2      53 ..     365     422 ..     357     423 .. 0.81

  Alignments for each domain:
  == domain 1  score: 44.3 bits;  conditional E-value: 2.5e-15
  CRAL_TRIO_N   2 ydellahlqeseyk...........lteeekfWltredhddaclLRfLRArkwdvekAikrLe 53 
                  y+e++  +q+ +             l+e ek +lt+e     c+LRfLRA+kw+ + ++kr+ 
   EPX70979.1 365 YKEVFIFCQDLKSIpvspkseekegLSEIEKYFLTKE-----CILRFLRATKWNAATTKKRIL 422
                  6666666654444455555566689************.....*******************96 PP

>> CRAL_TRIO_2  Divergent CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   5.6e-05      0.33      42     133 ..     503     589 ..     481     594 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 5.6e-05
  CRAL_TRIO_2  42 VyfhtglssenkpslswlkkvystlprrykknlkklyivhpstfvktllktvlsafvsskfrkkveyvsrleeLarkidrtqllkslPegvv 133
                  ++  +  s+ ++ps +  k v+++l+ +y ++l k  +++  + v  ++  + s+f  +  r+k+ + +    L r++  +ql ++++ g +
   EPX70979.1 503 LINFKASSNRSNPSVGQGKEVLNILQTHYCERLGKALVINIPWAVWGFF-KLISPFIDPITREKLKFNEP---LERYVPMDQLDTNFG-GSL 589
                  4555556889***************************************.89999999999***777655...577799999988888.655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (732 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       528  (0.0294495); expected 358.6 (0.02)
Passed bias filter:                      292  (0.0162865); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.64u 0.29s 00:00:00.93 Elapsed: 00:00:00.46
# Mc/sec: 4737.18
//
Query:       EPX70980.1  [L=105]
Description: DNA replication factor A subunit Ssb3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.7e-26   92.6   0.1    1.9e-26   92.4   0.1    1.0  1  Rep_fac-A_3  Replication factor A protein 3


Domain annotation for each model (and alignments):
>> Rep_fac-A_3  Replication factor A protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.4   0.1   1.1e-30   1.9e-26       1     105 []       1     103 [.       1     103 [. 0.99

  Alignments for each domain:
  == domain 1  score: 92.4 bits;  conditional E-value: 1.1e-30
                  GGS--EEE-GGGGGGGTTSEEEEEEEEEEETTSSEEEEE-TTS-EEEEEESS--SS---SEEEEEEEE-TTS-EEEEEEEE------HHHHHHHHHHH CS
  Rep_fac-A_3   1 MdsetprvnpsmLsqfvgrtvrivgkvesvpsgktlilqstdggsvtvrlsedstleiskwvEvvGkvsddlgirldsvvefgedlDldlynklvqlt 98 
                  M+++tprv+++mL ++ grtvrivgkv +v s   + ++++ g+ ++++l+ d++le  +++E+v  v+ d +++l+++v+fg+++D+d+y++lvq++
   EPX70980.1   1 MERPTPRVTSDMLGECAGRTVRIVGKVIRV-SDRAAQVDCN-GQPFEMNLTVDNNLETMHFYEFVVSVKHDSSVQLLTCVDFGTSIDMDAYKNLVQFS 96 
                  9*****************************.999******9.999***************************************************** PP

                  HHSGGGS CS
  Rep_fac-A_3  99 hkfpely 105
                  +k+++l+
   EPX70980.1  97 NKYKSLF 103
                  ****998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       384  (0.0214178); expected 358.6 (0.02)
Passed bias filter:                      284  (0.0158403); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.44
# Mc/sec: 721.40
//
Query:       EPX70981.1  [L=979]
Description: 3'-5' exonuclease for RNA 3' ss-tail [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.4e-55  187.3   0.1      2e-54  185.2   0.1    2.1  1  RNB       RNB domain


Domain annotation for each model (and alignments):
>> RNB  RNB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  185.2   0.1   1.1e-58     2e-54       1     323 [.     522     863 ..     522     866 .. 0.82

  Alignments for each domain:
  == domain 1  score: 185.2 bits;  conditional E-value: 1.1e-58
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RNB   1 RkdlrdllvitIdpedakdlDdAisieklpngnyelgVhIADvshyvkegspldkearkratsvyLpe.kvvpMLPqelsedlcSLnpgedrlalsvli 98 
                 R+dl++l ++ Id++++ ++DdAisiek  +g ++l++hIA +s++++ +spl+  a++  +++yL + +   MLP  l+++l +L     ++al++  
  EPX70981.1 522 RTDLTHLNCFAIDSSSTLEVDDAISIEKKRKG-FWLHIHIANPSSMIDLNSPLMAFAERNFQTLYLTHiEKKFMLPLGLTKQLWTLDGSDRQRALTFSA 619
                 89*************************99998.**********************************944566************************** PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxx......................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RNB  99 dvdekgevlsveiylsvIkskarltydevqdlleqkdeke.ekk......................taedLellyelakalrkkRlkkgalefdspeik 174
                 +++++gevl++++++s+I+ ++r+ty++v ++l++k++ + + +                      +        e  k++ + ++k++++ f++p+ +
  EPX70981.1 620 KLSKNGEVLDYKVQPSWISRVKRYTYSQVCAALNEKENLTvYSSvqsrnlakepeipaddrqaifsI-------LEEVKKFTRLKQKNNSFMFQQPSLS 711
                 ************************************99998777************99954444444.......4444444444555566666666666 PP

                 xxxxxxxx...................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxx RF
         RNB 175 llldedkg...................nrielkveeetkahslveelmllANelvArflseleipailriheeps...nekledliklakklglkledn 251
                 + l + ++                    +++++++ ++ a+ lv+e+m+lA ++ A+f+se++ip+i+r+++ p    n+  e + kl++        +
  EPX70981.1 712 VDLLP-EKipetmisgtnpvywssfpsISLTINHSGMNVAELLVSECMILAGHISAKFFSEHRIPGIYRGQNIPFsfdNSFNEHFDKLLR------ARD 803
                 66655.3336666666677899999877788****************************************8776555444455555555......111 PP

                 xxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxx RF
         RNB 252 sskknlqeslekleeeeaeqllsel.llrllkeakyssepvgHfgLalee.YthfTSPirRYpDlvvhrllkal 323
                 ++            + +   l +++ +  +l+++ +s++ ++Hf L+++  Y++ TSP+rRY+Dl++h++++ l
  EPX70981.1 804 EWG-----------KVP---LEQMYpISPYLTSSYMSTKGAPHFSLGINSgYMQSTSPLRRYTDLINHYQMQCL 863
                 222...........222...11222144578888888888*********99*******************9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (979 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       574  (0.0320152); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.73u 0.31s 00:00:01.04 Elapsed: 00:00:00.48
# Mc/sec: 6153.34
//
Query:       EPX70982.1  [L=364]
Description: hypothetical protein SOCG_01203 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (364 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       894  (0.0498633); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 2644.09
//
Query:       EPX70983.1  [L=847]
Description: Trp-like ion channel [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.5e-28   97.6  32.6    6.5e-28   97.6  32.6    2.0  1  TRP              Transient receptor potential (TRP) ion chann
    1.6e-05   25.3   0.0    4.1e-05   24.0   0.0    1.6  1  TRP_N            ML-like domain
  ------ inclusion threshold ------
      0.021   14.8   0.4      0.021   14.8   0.4    2.7  3  Phage_holin_3_6  Putative Actinobacterial Holin-X, holin supe


Domain annotation for each model (and alignments):
>> TRP  Transient receptor potential (TRP) ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.6  32.6   1.1e-31   6.5e-28      35     396 ..     236     565 ..     221     575 .. 0.81

  Alignments for each domain:
  == domain 1  score: 97.6 bits;  conditional E-value: 1.1e-31
         TRP  35 aasvlslflyfQsvafigmlsvnyPpvlaawtqnfaWsmglirvs.fmqkiinwyvqstgGtatlvlsssstssvsvkralkrgeskslpesssklv.. 130
                 a  + +l++y+Q+++ ++ l+v++P+++ +++  + Ws+ l+r   f q+   ++   t  +      +       v+r +           ++ ++  
  EPX70983.1 236 ALGFSDLIGYMQFAVSTSQLNVAFPKFYINLMAAVSWSTVLFRFPiFSQNANYQFADYTDLA------N-------VNRVA----------YEEFIPnk 311
                 444899***************************************99999999999998772......1.......22221..........12233221 PP

         TRP 131 rGikrvaekagiestnafmtgllffliliallvvlvllfKlllellarkklikedrlkefrknwlgilkgallrlilifffqllvlclfeftqrdsaav 229
                 +G+++++  +g  ++  ++  +l++ ++ + +++l++l+ +ll++l  ++++++d++ e r + +++++g + rl+++++f+++++ +++f+ + s  +
  EPX70983.1 312 YGMASFLDSLGTRQS--CWIPFLIVGAVYFGAALLLALLIILLKWL--MSKMFHDTIVETRWDTWSFIGGFFIRLYFLAYFPIITYMSYQFVVEPSGYE 406
                 4******99998776..56666665555555555555555555444..3458999999**********************************7777776 PP

         TRP 230 vvlAvillalflgvllffafrvlitarkskrlhknpaylLysdkkvlnkyGflyeqyrasrywffvpllvylfvkalfialaqgsGkvQvialliiEll 328
                 ++   +l+++flg+    +   ++++ +       p+++L++d+++l+ yG +y++yr++r  f v+ +v +f++++ ++++  sG++Qv++ +++E+ 
  EPX70983.1 407 IIP--VLIFIFLGIFFPGCLYLFLSFVE-------PVSKLFEDQTYLHLYGSIYNSYREKRLMFWVFPIVSQFIRGITVGVLGVSGSAQVAIYFLLEIT 496
                 654..44445666644455555555544.......5779************************************************************ PP

         TRP 329 ylvlliwlrPye.dkrtnvlniiisvvkvlnvilllaFseefglseivktvvGvvlivinavlalvlli 396
                 ++ + +++rP++ +   nvl+ ++s+++++ v+l+++ +      +     + + ++ +++++ +++++
  EPX70983.1 497 NILAYSIFRPHYpQTNMNVLSCYLSIIRLIIVALMMPLVHPRSTMNGQDKLLTYAILFVHGFVYVMFFL 565
                 **********762567899********************999999999999999999999988776654 PP

>> TRP_N  ML-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.0   6.8e-09   4.1e-05       5     134 ..      31     178 ..      28     181 .. 0.86

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 6.8e-09
       TRP_N   5 sfenClens......qftaskfdvtftpdnktvvfnvtgt..........ssienkavtlelkveaygyevvnetvdpCdan.......vkglCPlgpg 80 
                 +f++Cl+ +      +ft+  +   f+++n+  +++v g           s ++ +a t++ + +a+g  v ++++++Cda        v   CP ++g
  EPX70983.1  31 DFKDCLSTNrkhdvpSFTPYALVKHFNRRNRHYYIQVMGNlsekitvvggSGEDVHAATIYSETYALGSLVSSKSTKLCDAVmdahsfgVPIKCPWPAG 129
                 799**5543467788****************888888888888899999988888889**********************9988889999999****** PP

       TRP_N  81 fkinasgvlkvseevvseipsiaYsipdldatvrvriystgeateiaCvsatit 134
                  ++++   ++  +     +    Y++++l+ ++ + +  t e++ iaCv+ +++
  EPX70983.1 130 -NVSFMIDIPFGS---TVLDYSKYELTSLTNRLII-VDGTPERNVIACVTFDLS 178
                 .888886666655...5667889**********99.776679*******98875 PP

>> Phage_holin_3_6  Putative Actinobacterial Holin-X, holin superfamily III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.4      0.45   2.7e+03      47      67 ..     192     213 ..     178     217 .. 0.56
   2 ?   14.8   0.4   3.6e-06     0.021      65     107 ..     327     369 ..     311     372 .. 0.77
   3 ?   -4.2   0.3       2.9   1.7e+04      37      51 ..     551     565 ..     546     571 .. 0.46

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.45
  Phage_holin_3_6  47 allalllllvalalalaa..lwl 67 
                       l+ ++++++ +++al +  +w 
       EPX70983.1 192 SLICFTFVSFSIVFAL-FlnPWT 213
                      3444555555556666.223665 PP

  == domain 2  score: 14.8 bits;  conditional E-value: 3.6e-06
  Phage_holin_3_6  65 lwlaalivaavllvlagvlalvglkklkkakplpertieelke 107
                       w+ +liv+av++ +a++lal+++     +++++  ti e + 
       EPX70983.1 327 CWIPFLIVGAVYFGAALLLALLIILLKWLMSKMFHDTIVETRW 369
                      7***************999999988555566799999998875 PP

  == domain 3  score: -4.2 bits;  conditional E-value: 2.9
  Phage_holin_3_6  37 agllgaagvlallal 51 
                      a+l++ + v +++ l
       EPX70983.1 551 AILFVHGFVYVMFFL 565
                      333443333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (847 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       851  (0.047465); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.69u 0.28s 00:00:00.97 Elapsed: 00:00:00.49
# Mc/sec: 5239.48
//
Query:       EPX70984.1  [L=505]
Description: UTP-glucose-1-phosphate uridylyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   4.4e-197  654.7   1.1   5.1e-197  654.5   1.1    1.0  1  UDPGP     UTP--glucose-1-phosphate uridylyltransferase


Domain annotation for each model (and alignments):
>> UDPGP  UTP--glucose-1-phosphate uridylyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  654.5   1.1  2.9e-201  5.1e-197       1     413 []      57     470 ..      57     470 .. 0.99

  Alignments for each domain:
  == domain 1  score: 654.5 bits;  conditional E-value: 2.9e-201
       UDPGP   1 lesFkklferyleekskqekidwdkieplpeeevvdyedlkekeeekkellnklavlkLnGglGtsmGckgpKslieVrdgktfLdlivqqieelnkky 99 
                 +++F++lf+ryl+e++k ++idwd ++++++e+vv+y++l ++++ ++++lnklavlkLnGglGt+mGc+gpKs+ieVr+g++fLdl+v+qie+ln+ky
  EPX70984.1  57 MDNFFSLFNRYLQESAKGTEIDWDLVKSPKPEQVVEYDTL-NDTTLTRDYLNKLAVLKLNGGLGTTMGCVGPKSIIEVREGNSFLDLSVRQIEHLNRKY 154
                 799*************************************.889999**************************************************** PP

       UDPGP 100 nvdvPlvlmnSfnTdedtekilkkykkkkvdiltfnqsryPriskesllpvekkakkeekeewyPpGhGdlyesLknsglldkllaeGkeyiFvsniDN 198
                 nv+vP+vlmnSfnTde+t+k++kky+ +k+diltfnqsryPr++ke+llpv+++ + +  ++wyPpGhGd++e+L+nsg++dkllaeGkey+FvsniDN
  EPX70984.1 155 NVNVPFVLMNSFNTDEATAKLIKKYEAHKIDILTFNQSRYPRVHKETLLPVAESID-SPIDQWYPPGHGDVFEALTNSGIIDKLLAEGKEYLFVSNIDN 252
                 ******************************************************95.789*************************************** PP

       UDPGP 199 lgatvDlkilnllvekkaeflmevtektradvkgGtlieyegklrlleiaqvpkehveefksvkkfkifntnniwinlkalkrlveekelkleiivnkk 297
                 lga+vDl+iln++ve+kae++me+t+kt+advkgGtli+yeg++rlleiaqvp++hveefks+kkfk+fntnniw++l+a+kr+ve++el++eii n+k
  EPX70984.1 253 LGAVVDLNILNHMVETKAEYIMELTNKTKADVKGGTLIDYEGNVRLLEIAQVPSQHVEEFKSIKKFKYFNTNNIWFHLPAVKRVVENHELSMEIIPNNK 351
                 *************************************************************************************************** PP

       UDPGP 298 tld.egek..viqletavgaaiksFkkavginVpRsrflpvkttsdlLlvksdlysleegslvlnpkrsfktvplvkLgsefkkveefqkrfksipsll 393
                 t++ +ge+  ++qleta+gaai++Fk+a+g+nVpR+rflpvkt+sdlLlvksdlys+++g+l +np+r+ +++plvkLg++fkkv++f+++++sip++l
  EPX70984.1 352 TIKhKGENinILQLETAAGAAIRHFKNAHGVNVPRRRFLPVKTCSDLLLVKSDLYSINHGQLDMNPRRFGGSAPLVKLGTQFKKVADFTSHIPSIPKIL 450
                 ***88888889**************************************************************************************** PP

       UDPGP 394 eldhltvsGdvtfgknvtLk 413
                 eldhlt++G+v +g+nvtLk
  EPX70984.1 451 ELDHLTITGNVNIGRNVTLK 470
                 *******************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (505 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       779  (0.0434492); expected 358.6 (0.02)
Passed bias filter:                      549  (0.0306208); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.30s 00:00:00.89 Elapsed: 00:00:00.47
# Mc/sec: 3245.24
//
Query:       EPX70985.1  [L=613]
Description: leukotriene A-4 hydrolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.3e-50  170.7   0.0    4.4e-50  170.3   0.0    1.2  1  Peptidase_M1     Peptidase family M1 domain
    2.1e-38  130.9   0.2    4.2e-38  129.9   0.2    1.6  1  Leuk-A4-hydro_C  Leukotriene A4 hydrolase, C-terminal
    1.1e-27   97.5   0.0    1.6e-27   96.9   0.0    1.3  1  Peptidase_M1_N   Peptidase M1 N-terminal domain
  ------ inclusion threshold ------
       0.16   11.7   0.0       0.39   10.4   0.0    1.6  2  AAA_24           AAA domain


Domain annotation for each model (and alignments):
>> Peptidase_M1  Peptidase family M1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  170.3   0.0   9.8e-54   4.4e-50       1     218 []     230     448 ..     230     448 .. 0.88

  Alignments for each domain:
  == domain 1  score: 170.3 bits;  conditional E-value: 9.8e-54
                   HHHHHHHHHHHHHHHHHTS--SSSEEEEEEE.SSTTSSEEEETTEEEEEGGGC-SSTTTS-HHHHHHHHHHHHHHHHHHHBTTTEEESSGGGGHHHH CS
  Peptidase_M1   1 yalevtkkllefleeyfkvpYplpkldlval.pdfsagAMEnwglityreelllvdpenssesdkrsvaeviaHElaHqWfGnlVtmkwWddlwLnE 96 
                   +++e+++++++ ++e +++pY+++++d+v+l p+f++g+MEn+++++++++l++ d         rs+++viaHElaH+W+GnlVt+++W+++wLnE
    EPX70985.1 230 FEFEHDMENFMKAAESLTTPYAWTRYDFVVLpPSFPYGGMENPNATFATPTLIAGD---------RSNVSVIAHELAHSWSGNLVTNESWQCFWLNE 317
                   7899***************************99***********************.........9999**************************** PP

                   HHHHHHHHHHHHHHSC.CCHCHHHHHHHCHHHHHHHHTSTTHHHSSG..G-GSHHHHHHTSSHHHHHHHHHHHHHHHHHCT.HHHHHHHHHHHHHHC CS
  Peptidase_M1  97 Gfatyleylildklep.ewevseqllleeveealsedaldeshpitq..evekpseidevFdsiaYeKGasllrmlekllg.eevFqkglksYlkef 189
                   G++++le++i++++++ +++ + + ++   e + + +  +++h++t+     + +++d++F++i+YeKG+++l  +e+++g + vF+ +l+ Y+++f
    EPX70985.1 318 GMTVFLERKIIGRVQGeKYR-QFDAIIGWGELKEAVELFGKDHEFTKliVDLDGKDPDDAFSTIPYEKGFNFLYEIERVVGgPVVFEPFLSFYFRKF 413
                   ****************5444.3333466666678888999999999521223588*************************999************** PP

                   TTEEE-HHHHHHHHHHCCC.....SCHHTH.HHHH CS
  Peptidase_M1 190 kyknaetedlwdaleealn.....kdisev.mdtw 218
                   + +++++ ++ +al+e  +     + ++++ +d w
    EPX70985.1 414 ANSTVNEVKFKNALYEYFKplglsQALDSIdWDAW 448
                   ****************6555555577777766666 PP

>> Leuk-A4-hydro_C  Leukotriene A4 hydrolase, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.9   0.2   9.4e-42   4.2e-38       1     113 []     497     608 ..     497     608 .. 0.99

  Alignments for each domain:
  == domain 1  score: 129.9 bits;  conditional E-value: 9.4e-42
                      --HHHHHHHHHHHHTT-GGG-HHHHHHHHHHTIIIT---HHHHHHHHHHHHHTT-GGGHHHHHHHTTT---HHHHHHHHHHHHTT-HHHHHHHH CS
  Leuk-A4-hydro_C   1 fssnqkvlfLekLlekekplpaekleaLdelYklseskNaeirlrwlqlalkakyeeavpevaeflgsqGrmkfvrplYraLnkvdrdlAketF 94 
                      +s+ q+ lfL+ L+e + ++p++ + a+d++Y++s+s+Naei +r+++l+lk+ky++ ++++a+ +g++Grmkfvrp+Yr Ln+ d+dlA++tF
       EPX70985.1 497 WSAAQLSLFLDVLFEAD-AFPHNYIAAMDSAYSFSNSRNAEISFRYFKLVLKSKYKPLYERIADQVGKVGRMKFVRPTYRLLNQADHDLAVKTF 589
                      99*************99.**************************************************************************** PP

                      HHHGGGS-HHHHHHHHHHT CS
  Leuk-A4-hydro_C  95 ektkdfyhpiarklvekdL 113
                       k+ +fyh+i++ lv+kdL
       EPX70985.1 590 RKYSNFYHKICAGLVKKDL 608
                      *****************98 PP

>> Peptidase_M1_N  Peptidase M1 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.9   0.0   3.6e-31   1.6e-27       2     186 .]      11     199 ..      10     199 .. 0.90

  Alignments for each domain:
  == domain 1  score: 96.9 bits;  conditional E-value: 3.6e-31
                     EEEEE.......EEEEEETTTTEEEEEEEEEEEES...S-ECEEEEEESSEEEECEEEEECTTCTCEEEEEEEECTTTTC...EEEEECCEEETT CS
  Peptidase_M1_N   2 pehYd.......ldlkidlkektfkGsvtitlqlk...eatseivldakdlkiksvslsaevksesvkidfkieqkdeel...ltiklkeslqqt 83 
                     +++Yd       ld +id+ +k + G+v+ ++q +   e+ s+i+ld+++l++      ++++ +++++ f+++++++ l   l++  +++  + 
      EPX70985.1  11 SNYYDvsihhllLDAEIDFGKKLLFGTVEYKIQSArisEPLSHIILDTSYLDV------KSASLNGTPVPFRVDERRDFLgnaLHVVPPKPIPAI 99 
                     67888888888899999999*************99999***************......77777799999999999999888888899998888* PP

                     CEEEEEEEEEEE-BSSSSEEE....EEEEEETSCEEEEEEEE-TTTTGGGTS-B--STTSEBEEEEEEEEETTSEEEESSECCCEEEETTCEEEE CS
  Peptidase_M1_N  84 skytLeieyegelndklaGly....kstYtdkgekkvvvvTqfeatdARsafPCfDePsvKAtftisikapkeetalSnmpeeeseklengqkit 174
                     + +tL i +++  ++++++++    ++t    g++ +++++q++a++ARs++PC+D+PsvK  +t+ i+++ + ++ S++p+ +++   +++ ++
      EPX70985.1 100 DIATLRISFST--TKECTAIQfldpQQT---IGGNAPYMFSQCQAIHARSMLPCQDTPSVKVPCTFHIRSKLP-VIASGIPCGTRDFR-DDSLVY 187
                     ***********..********7754444...99999*************************************.*********55555.6677** PP

                     EEEEEESBEGGG CS
  Peptidase_M1_N 175 eFeqtpkmstYL 186
                      Feq + +++YL
      EPX70985.1 188 MFEQPLGIPSYL 199
                     ***********9 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       1.7   7.5e+03      42      72 ..     338     367 ..     333     368 .. 0.64
   2 ?   10.4   0.0   8.7e-05      0.39      64     175 ..     459     569 ..     408     590 .. 0.80

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 1.7
      AAA_24  42 kfpdieswedfldevvelaaeladyktlviD 72 
                 +f+ i +w +++++v+ +  +++++  l++D
  EPX70985.1 338 QFDAIIGWGELKEAVELF-GKDHEFTKLIVD 367
                 566677777777777666.555556666666 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 8.7e-05
      AAA_24  64 adyktlviDtideleelclaevirqnekaeskedkgdgkGygela.eefrrllkklqelrknvifiahektrkdedpegeakytrlepklgkktanelk 161
                 ++++t   D+  +l + +++ +++  +   +k ++ d  G+++++   f ++l   +++++n i+ + +      +++ e ++ ++++ l++k +++ +
  EPX70985.1 459 PQFDTTLADNCYKLADVWVNSAKTSENP--DKFKQDDIEGWSAAQlSLFLDVLFEADAFPHNYIAAMDSAYSFSNSRNAEISFRYFKLVLKSKYKPLYE 555
                 5677777777777777666666555554..556677999***99835799************************************************* PP

      AAA_24 162 eevDlvlranlkre 175
                  ++D v+ +   ++
  EPX70985.1 556 RIADQVGKVGRMKF 569
                 ******99765544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (613 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       381  (0.0212505); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.46
# Mc/sec: 3976.70
//
Query:       EPX70986.1  [L=983]
Description: karyopherin Kap113 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.1e-15   54.3   0.1      4e-14   52.3   0.1    2.3  1  IBN_N          Importin-beta N-terminal domain
    7.4e-07   29.3   0.6    7.4e-07   29.3   0.6    4.3  4  Xpo1           Exportin 1-like protein
  ------ inclusion threshold ------
       0.06   13.3   2.1       0.13   12.2   0.6    2.3  3  UNC45-central  Myosin-binding striated muscle assembly centra


Domain annotation for each model (and alignments):
>> IBN_N  Importin-beta N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.3   0.1   6.8e-18     4e-14       1      70 [.      24      92 ..      24      96 .. 0.95

  Alignments for each domain:
  == domain 1  score: 52.3 bits;  conditional E-value: 6.8e-18
                HHHHHHHHHCSTCHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHHHHGGSCCCHCGSXHHHHHHHHHHHHH CS
       IBN_N  1 AekqLkqlekqpgflsallqilanseselevRqlAalyLknlitkhWsdeeekqslpseekeqIrnnlln 70
                Ae+ L++++k+pgf+ +l++i+ ++++++++R+lA+++++n+i+  W++++++ sl + ek+++rnn+l 
  EPX70986.1 24 AETYLQEWKKEPGFFAKLYSIFLDKQNDISLRWLAIIQIRNSIDVIWRKNTKS-SLLPGEKDFFRNNALA 92
                8***********************************************88888.*************996 PP

>> Xpo1  Exportin 1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.3   0.6   1.2e-10   7.4e-07       4      66 ..     101     165 ..      98     212 .. 0.85
   2 ?   -1.1   0.1      0.29   1.7e+03      27      63 ..     316     359 ..     302     373 .. 0.66
   3 ?   -2.1   0.4      0.62   3.7e+03      29      51 ..     708     730 ..     690     791 .. 0.66
   4 ?    3.0   0.1     0.016        98      56      95 ..     848     888 ..     813     897 .. 0.77

  Alignments for each domain:
  == domain 1  score: 29.3 bits;  conditional E-value: 1.2e-10
                 HHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHHCT...HHHHHHHHHHHHHHHHHHHTSHTTTSCH CS
        Xpo1   4 lrnklaealaelflqeypnnWpsffddllsllsss..psglelllriLkvlpeEiadfsrskleq 66 
                 l+ + a++l+++++q+yp++Wps+f++l+s+l+++  +++  l lr+L +l+  +  +  ++l q
  EPX70986.1 101 LVVQNALVLSRIARQDYPSEWPSLFQELISSLHQNfdAQQPHLALRLLITLHHIVKAMAGNRLLQ 165
                 677889****************************88799999********997665555555555 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.29
                 HHHHHHHHHCT........HHHHHHHHHHHHHHHHHHHTSHTTT CS
        Xpo1  27 ffddllsllsss.......psglelllriLkvlpeEiadfsrsk 63 
                  +d+l++++s+        ++ + + lr++ ++ +Ei d++ s 
  EPX70986.1 316 QVDKLFAASSNFpeslkdlEKLVLMSLRVFITVLKEIEDTKTSH 359
                 45555555444246666668888899999999999999965443 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 0.62
                 HHHHHHHCT.HHHHHHHHHHHHH CS
        Xpo1  29 ddllsllssspsglelllriLkv 51 
                 + ll +ls+  s l+++l+iL++
  EPX70986.1 708 PHLLYQLSQATSSLPFTLMILNS 730
                 55555555556666666666653 PP

  == domain 4  score: 3.0 bits;  conditional E-value: 0.016
                 HHT.SHTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        Xpo1  56 iad.fsrskleqerrndlkdllrsnvqkilelllqileqsq 95 
                 ++d + + k ++  + ++  llr+n++++le l +i+  ++
  EPX70986.1 848 LFDyITHAKDRKLTALAITSLLRTNAEEVLEALNSIMHLWF 888
                 45656667777777888888889998888888888887766 PP

>> UNC45-central  Myosin-binding striated muscle assembly central
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.63   3.8e+03      21      77 ..     104     161 ..      89     188 .. 0.71
   2 ?   12.2   0.6   2.1e-05      0.13      13      95 ..     715     804 ..     687     817 .. 0.77
   3 ?   -3.5   0.0       1.5   8.8e+03      19      49 ..     858     888 ..     847     901 .. 0.69

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.63
                    HHHHHHHHHH.HHHHHHHHHHHHHHHHHHHSCCTHHHHHHHHHHHHHHHHSSHHHHHH CS
  UNC45-central  21 lallilskll.daakeefeeaiseflesllekgdeddllnalsvltalFpvvpdvasa 77 
                    +  l+ls++  +    e    ++e ++sl +  d ++   al++l +l  +v  +a +
     EPX70986.1 104 QNALVLSRIArQDYPSEWPSLFQELISSLHQNFDAQQPHLALRLLITLHHIVKAMAGN 161
                    4456667766566888888899999999999999999999999888888887665543 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 2.1e-05
                    ---TTHHHHHHHHHHHHH....HHHHHHHHHHHHHHHHHHHSCCTHHHHHHHHHHHHHHHHS.SHHHHHHHHTSTTHHHHHHHHHHS... CS
  UNC45-central  13 rqpesvrslallilskll....daakeefeeaiseflesllekgdeddllnalsvltalFpv.vpdvasalflsegflesllelves..k 95 
                    +q  s     l+il+ +l       +e+++  + e l++ll++ ++d+ll+++++l+ lF+v + +++++ +  +++l+ +l+ + s  k
     EPX70986.1 715 SQATSSLPFTLMILNSYLllqsSVITENYSLDVLERLTNLLSDVKNDTLLALCKTLSLLFEVnASNSIHESLVHSTLLPVVLNSIISseK 804
                    4555555567889999998987778999999******************************94567888888888898888888766443 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 1.5
                    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  UNC45-central  19 rslallilsklldaakeefeeaiseflesll 49 
                    r l  l+++ ll ++ ee  ea++ +++ ++
     EPX70986.1 858 RKLTALAITSLLRTNAEEVLEALNSIMHLWF 888
                    6666777777778888888888877777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (983 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       546  (0.0304535); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.72u 0.26s 00:00:00.98 Elapsed: 00:00:00.45
# Mc/sec: 6581.75
//
Query:       EPX70987.1  [L=544]
Description: CAMK/CAMK1 protein kinase Srk1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.8e-68  230.8   0.0    2.6e-68  230.3   0.0    1.2  1  Pkinase         Protein kinase domain
    1.6e-27   96.4   0.0    3.5e-27   95.3   0.0    1.5  1  Pkinase_Tyr     Protein tyrosine kinase
    0.00024   20.5   0.4       0.62    9.3   0.1    2.4  2  Kinase-like     Kinase-like
     0.0032   16.3   0.0     0.0054   15.6   0.0    1.3  1  Pkinase_fungal  Fungal protein kinase
  ------ inclusion threshold ------
       0.14   12.1   0.0       0.27   11.1   0.0    1.4  1  APH             Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  230.3   0.0   7.2e-72   2.6e-68       1     264 []      95     391 ..      95     391 .. 0.92

  Alignments for each domain:
  == domain 1  score: 230.3 bits;  conditional E-value: 7.2e-72
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.........HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHH CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.........kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladlle 90 
                 y+ l+k G G+f++Vyka+++ tg++vA+K +++ +  + ++         +++l+Ei+++++++hpn+++l+++++++++++l+le++eggel++ + 
  EPX70987.1  95 YTLLSKTGDGAFSNVYKAIHNITGEKVAIKAVQRARPVDPTNpgrrqgvesHNILKEIQLMRRIQHPNVIQLLDFIQTPEYFFLILELAEGGELFHQIV 193
                 6778999**************************9998887778899999999**********************************************9 PP

                 HHSS--HHHHHHHHHHHHHHHHHHH.HTTEE-SS-SGGGEEEET.................................TTEEEE-SGTTSEESSSSCSBC CS
     Pkinase  91 rkgslseeeakkiakqilegleylH.skgiiHrDlKpeNiLide.................................kgelKitDFGlakelesssklt 155
                 + + +see a++++ q++++++ylH + gi+HrD+KpeN+L+d                                   g ++++DFGl+k +  s+ ++
  EPX70987.1 194 HFTYFSEELARHVILQTAHAIRYLHeECGIVHRDIKPENLLFDPidfipskvrkyragddpdkvdegefrpgvgggtIGRIRLADFGLSKVIWDSH-TQ 291
                 9899*********************5567**************779**************99999888887776655555*************988.** PP

                 TTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTT CS
     Pkinase 156 sfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRlt 254
                 + +gt  Y APE++++ +ysk+vD+W+lG++ly++l+g ppf++e+ ++ ++k ++         g++++ +p++++is++akdl++ ll++dp +R+ 
  EPX70987.1 292 TPCGTMGYTAPEIVRDGKYSKSVDMWALGCVLYTILCGFPPFYDESISSLTKKVAH---------GQYTFLSPWWDDISKSAKDLVSHLLTVDPDSRYD 381
                 *******************************************4444443333333.........48999***************************** PP

                 HHHHHTSGGG CS
     Pkinase 255 aeellqhpyl 264
                 +++ l+hp++
  EPX70987.1 382 IHQFLSHPWI 391
                 *********7 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.3   0.0   9.8e-31   3.5e-27       4     255 ..      98     385 ..      95     388 .. 0.86

  Alignments for each domain:
  == domain 1  score: 95.3 bits;  conditional E-value: 9.8e-31
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEEST..........TSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHH CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtlke..........eateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkf 91 
                   +k G Gaf++V+++  +     + +kVa+K +++          + +  e++++l+e+++m++++hpn+++ll ++   e  ++++e+++gG+L + 
   EPX70987.1  98 LSKTGDGAFSNVYKAIHN----ITGEKVAIKAVQRarpvdptnpgRRQGVESHNILKEIQLMRRIQHPNVIQLLDFIQTPEYFFLILELAEGGELFHQ 191
                  6788************99....88899****99764455554443344456999*****************************************999 PP

                  HHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT.EEEST-SGGGEEEEE.................................TTEEEE-STTTHEETTT CS
  Pkinase_Tyr  92 LrkkekekltlkdllsfalqvAkGmeyLeskk.lvHrdlaarNvLlse.................................nkvvkisDfGLardiek 155
                  + +   + ++ +   +++lq A++++yL+++  +vHrd+   N L +                                     ++++DfGL++ i  
   EPX70987.1 192 IVHF--TYFSEELARHVILQTAHAIRYLHEECgIVHRDIKPENLLFDPidfipskvrkyragddpdkvdegefrpgvgggtIGRIRLADFGLSKVIW- 286
                  9886..8999999999************98744**************999****************************988789************2. PP

                  SSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHHHTTEE.S-BB..TTSBHHHHHHHHHHT-SSGGGS- CS
  Pkinase_Tyr 156 ddeyvkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglkneevleklkegkr.lekp..ekcpeelyelmkkcweedpeeRp 250
                  d   +++++    + ++apE+++++k++++ D+W+ G +l+ i++ g  p+ + + +++++k+ +g+     p  ++++++ ++l+++ ++ dp++R 
   EPX70987.1 287 D---SHTQTPCGTMGYTAPEIVRDGKYSKSVDMWALGCVLYTILC-GFPPFYDESISSLTKKVAHGQYtFLSPwwDDISKSAKDLVSHLLTVDPDSRY 380
                  2...22333445789*****************************9.*******999999999966654244443378899999999999999999998 PP

                  -HHHH CS
  Pkinase_Tyr 251 tfsel 255
                  ++++ 
   EPX70987.1 381 DIHQF 385
                  87765 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.0   0.00023      0.81     139     179 ..     197     237 ..     174     240 .. 0.84
   2 !    9.3   0.1   0.00017      0.62     223     250 ..     306     333 ..     290     379 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00023
  Kinase-like 139 kkletiarlllTlqlirlaanLqak.glvhgkftvdnlllde 179
                     e++ar+++ lq    + +L+++ g+vh +++++nll+d+
   EPX70987.1 197 YFSEELARHVI-LQTAHAIRYLHEEcGIVHRDIKPENLLFDP 237
                  4457899**99.9999999***9865**************97 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00017
  Kinase-like 223 nktkmthkldaWqlGlviyriwclklPl 250
                  +  k++ ++d W+lG v y i c   P+
   EPX70987.1 306 RDGKYSKSVDMWALGCVLYTILCGFPPF 333
                  4568999****************88887 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   1.5e-06    0.0054     314     392 ..     209     311 ..     192     328 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 1.5e-06
  Pkinase_fungal 314 DaIkghrsLflkagiLHrDiSenNilit..................dskke............gerkglLiDLDlakelsddssesgarertGTl 378
                     +   + r L++++gi+HrDi  +N+l+                   d+                  +  L+D+ l k + d s   + ++  GT+
      EPX70987.1 209 QTAHAIRYLHEECGIVHRDIKPENLLFDpidfipskvrkyragddpDK--VdegefrpgvgggTIGRIRLADFGLSKVIWD-S---HTQTPCGTM 297
                     55567899*******************999999999999999975522..2346677888765556678899999998885.3...334579999 PP

  Pkinase_fungal 379 eFmaievlkgeeHs 392
                      + a e++++++ s
      EPX70987.1 298 GYTAPEIVRDGKYS 311
                     99999999976644 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   7.5e-05      0.27     162     181 ..     213     236 ..     143     244 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 7.5e-05
                 S....SS-EEEE-SS-SGGGEEEC CS
         APH 162 g....elptvllHgDlhpgNllvd 181
                 +    +++ +++H+D++p Nll+d
  EPX70987.1 213 AirylHEECGIVHRDIKPENLLFD 236
                 2444569999*************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (544 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       395  (0.0220313); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.67u 0.33s 00:00:01.00 Elapsed: 00:00:01.58
# Mc/sec: 1042.57
//
Query:       EPX70988.1  [L=441]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-62  212.4  24.1    9.3e-62  209.5  24.1    2.3  1  DUF5427         Family of unknown function (DUF5427)
  ------ inclusion threshold ------
       0.05   13.9   7.8        0.1   12.9   7.8    1.4  1  CD99L2          CD99 antigen like protein 2
      0.053   13.6   0.0       0.15   12.2   0.0    1.7  1  MHC_II_beta     Class II histocompatibility antigen, beta dom


Domain annotation for each model (and alignments):
>> DUF5427  Family of unknown function (DUF5427)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  209.5  24.1   1.6e-65   9.3e-62       3     464 ..      17     410 ..      15     411 .. 0.75

  Alignments for each domain:
  == domain 1  score: 209.5 bits;  conditional E-value: 1.6e-65
     DUF5427   3 fleslpedk.tvk.kkkkkkktkkkkkakkkdee.diLaeLeeLakkesrpaTPrvksnkskkaspkkkksaeepakeekkkeeessedkrksvestrs 98 
                  l++l+ ++ +++ k+++k++t+k+++a++ ++e +iL++L+eL+++ +r a         + ++p++ ++++e+++++++     +e   ks      
  EPX70988.1  17 SLDQLGAENtETDsKPDEKESTEKNEQADAPENEkEILDFLDELENE-KREA---------AYKQPSEGATTQESSQDQTE----PKE---KS------ 92 
                 68999999854445444444444444444333335*********993.3433.........22222222222222211111....111...11...... PP

     DUF5427  99 leasetpseeeseeqeaekkeeeeeeaeeeeadpiasgsgWWgsilatasaavkqaeaavkeiqtneeAkkwaeqvrg..nvgalrglgdelrtr.... 191
                     ++ps+ ++++     +  +e+e+ee++  + ++ s+W g+++++asaav +ae++v+ i++ ee  +w +qvr+  + ++l ++g+ +r++    
  EPX70988.1  93 ---RNEPSDDHTSK-----RFGSENEKEENNGTKEENKSNWLGGLWSSASAAVRSAEQHVRSIKNLEETAHWDSQVRKmmDLNKLGDIGNGIRSKalpt 183
                 ...12222221111.....11111122222334556779***************************************8878889999*******5555 PP

     DUF5427 192 alptltellktlappisshEvLqIhithDlvnypsLdplvyekFsrvmsqVeGgdllvvqrgqesterrsseesskssagwrdgpwwrqdskrdLnlvk 290
                  ++t++++++ +appi+ hEvLq+ + hDl +++ +d++vy+ F++vmsqVeGgdl v    + + ++r+s+                     ++ l +
  EPX70988.1 184 LSHTFQNVMNVVAPPIQDHEVLQVTVFHDLAGFSHVDRIVYDSFDNVMSQVEGGDLTVLLDKEAKVRSRTSDL------------------YENFALCN 264
                 55678899999***********************************************766555555555554..................489***** PP

     DUF5427 291 GlvegeKLaranaesyakeyfkarggle..eaakrakeelsesnpvrssdiFlaiqaisvkskkaaeekekeesevvdeneedesvsFaivlkDivhdi 387
                 Gl e++KLa+ n+ + ++  +k  ++ +  + +++++++++es ++r   ++l+iqa+++ksk+               +e+ e++sF + lkD+ hd+
  EPX70988.1 265 GLLEAKKLAKENLVEPIRHAKKHLEESNstKLKEENNKDKEESSSIRVTQLLLSIQAFTIKSKE--------------ISET-EQLSFLLCLKDVNHDL 348
                 *********9888777766666555544556678888899999******************988..............2334.789************* PP

     DUF5427 388 tfitvSQsfPlkWieWLdaekpktseskeeeelpeeieeiiesggvdPreWVaeWieegLsLavGvvAqrYVakRMG 464
                 +f t SQ++Pl W +W                ++++  +     ++ P+eW  +W e+ +s+a G++Aq Y  kRM 
  EPX70988.1 349 EFFTTSQPIPLEWHQWA---------------VDDRYVQLFGPTAILPNEWAIQWTENCISVAAGILAQMYTSKRMA 410
                 ****************4...............456788899999********************************6 PP

>> CD99L2  CD99 antigen like protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   7.8   1.7e-05       0.1       9     127 ..      24     137 ..      10     141 .. 0.66

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.7e-05
      CD99L2   9 dkkektkkpaltttttkaPkkttkkPakkkpkpaeaddldLsDAldkkndikkkgkkkggseggtfsdddledvaegggykPDkgkgggrsgsnd.... 103
                 +++e+++kp++++ t+k+ +    +P+      +e++ ld  D l++++   + ++ ++g+++++ s +d ++  e+   +P  ++ ++r gs++    
  EPX70988.1  24 ENTETDSKPDEKESTEKNEQ--ADAPE------NEKEILDFLDELENEKREAAYKQPSEGATTQESS-QDQTEPKEKSRNEPSDDHTSKRFGSENekee 113
                 55666666655554444444..34553......3445799999999888867766666656555555.5556677777789988888888888776655 PP

      CD99L2 104 dkgsdetaetgtiAgivsavamAl 127
                 ++g++e+++++ + g+ s+ + A+
  EPX70988.1 114 NNGTKEENKSNWLGGLWSSASAAV 137
                 555566666999999998877775 PP

>> MHC_II_beta  Class II histocompatibility antigen, beta domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   2.5e-05      0.15      16      44 ..     144     172 ..     138     194 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2.5e-05
                  EEEEETTEEEEEEETTTSSEEESSGGGHH CS
  MHC_II_beta  16 aryiyNkeelvrfDsdvgefvavtelgrp 44 
                  +r i N ee +++Ds+v +++ + +lg +
   EPX70988.1 144 VRSIKNLEETAHWDSQVRKMMDLNKLGDI 172
                  68888******************999954 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (441 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1696  (0.0945953); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.34s 00:00:01.00 Elapsed: 00:00:00.50
# Mc/sec: 2660.31
//
Query:       EPX70989.1  [L=276]
Description: cell wall protein Pwp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      2e-09   38.1   3.7      2e-09   38.1   3.7    2.6  2  GPI-anchored    Ser-Thr-rich glycosyl-phosphatidyl-inositol-a
  ------ inclusion threshold ------
       0.74    8.5   5.6       0.91    8.2   5.6    1.4  1  Presenilin      Presenilin
        3.6    7.3   6.4       0.16   11.6   0.6    1.8  2  PhrC_PhrF       Rap-phr extracellular signalling
        7.2    5.0  11.1        8.5    4.8  11.1    1.0  1  Utp14           Utp14 protein


Domain annotation for each model (and alignments):
>> GPI-anchored  Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.1   3.7   4.5e-13     2e-09       2      93 .]      25     117 ..      24     117 .. 0.89
   2 ?   -5.8   6.7         4   1.8e+04      56      56 ..     176     176 ..     133     238 .. 0.64

  Alignments for each domain:
  == domain 1  score: 38.1 bits;  conditional E-value: 4.5e-13
  GPI-anchored   2 sPssgevvtagkpvtitWkdsgtdpgtvtlvLcagssnnlksvktiasgiknsdgsytwtvpa.slesggaYflqiv.sesne.giynySdrFti 93 
                   sP++++v+++g++ t++W+ ++tdp  +++vL+++++ +++ v ++  ++++s+g+ t +++  s  + +++++ +  +++ + g +++S+ Fti
    EPX70989.1  25 SPTKDTVWKSGQTNTVSWDYVSTDPHRTKVVLVNMQN-YPNRVYDLG-TVDTSQGHLTTNIQLsSDLPHNDWQIYLNsDDQMNtGSLAQSQFFTI 117
                   8************************************.********8.788888888888854245557899999997777778*********98 PP

  == domain 2  score: -5.8 bits;  conditional E-value: 4
  GPI-anchored  56 g 56 
                   g
    EPX70989.1 176 G 176
                   1 PP

>> Presenilin  Presenilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   5.6    0.0002      0.91     247     297 ..     147     197 ..      54     258 .. 0.56

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0002
  Presenilin 247 easesskeeeseeesseksaqsseseeeseeesseaessaeesseekesee 297
                 ++s+ss++++s+++s+++sa+ss+s+++s ++s++++ss++ ss+ ++s +
  EPX70989.1 147 SSSSSSSSASSSSSSASSSASSSSSKSSSGSSSAPSSSSSAPSSSGSSSGS 197
                 111111111111111111111111111111111111111111111111111 PP

>> PhrC_PhrF  Rap-phr extracellular signalling
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.6   3.6e-05      0.16       1      29 [.       3      29 ..       3      31 .. 0.92
   2 ?   -3.9   0.7       2.5   1.1e+04       9      14 ..     266     271 ..     262     273 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 3.6e-05
   PhrC_PhrF  1 LKSKLlliCLAlaavFvAatvsANAeald 29
                LKS  +l CLA a  FvA  +  N ++ d
  EPX70989.1  3 LKSAGFLFCLASA--FVADAIQLNSPTKD 29
                89********987..9*****99***987 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 2.5
   PhrC_PhrF   9 CLAlaa 14 
                 C A+aa
  EPX70989.1 266 CVAVAA 271
                 888887 PP

>> Utp14  Utp14 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8  11.1    0.0019       8.5     450     555 ..     142     249 ..      95     265 .. 0.38

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0019
       Utp14 450 kkkkkkeskakkekreeeeedeskaaeekakkekskksekkkkkk.keesakeeeeeeeenpwlae...eekkkskkeevaaekssskakkskakakkk 544
                 +++ +++s+++++++++++++ s++a+++++k++s +s+++++++ + +s+ +++ +++++p  ++   + + +s+  ++a ++ ss+  ks++++  +
  EPX70989.1 142 SSTPSSSSSSSSSASSSSSSA-SSSASSSSSKSSSGSSSAPSSSSsAPSSSGSSSGSSSSAPSSSSvsaSGSVTSAAAKTAGGD-SSSGFKSSHRSTAS 238
                 111111111111111111111.11112222222222222222222122222222222222222222221223333333332333.33333333344444 PP

       Utp14 545 kkksskkkeaa 555
                 ++k  ++++ +
  EPX70989.1 239 NSKGGSSSKGS 249
                 44433333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (276 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1388  (0.0774165); expected 358.6 (0.02)
Passed bias filter:                      505  (0.0281667); expected 358.6 (0.02)
Passed Vit filter:                       209  (0.0116571); expected 17.9 (0.001)
Passed Fwd filter:                        72  (0.00401584); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.07u 0.37s 00:00:01.44 Elapsed: 00:00:00.54
# Mc/sec: 1545.61
//
Query:       EPX70990.1  [L=139]
Description: 60S ribosomal protein L23 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-36  125.3   0.0    1.6e-36  125.0   0.0    1.0  1  Ribosomal_L14  Ribosomal protein L14p/L23e


Domain annotation for each model (and alignments):
>> Ribosomal_L14  Ribosomal protein L14p/L23e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.0   0.0   9.1e-41   1.6e-36       4     122 .]      21     139 .]      19     139 .] 0.95

  Alignments for each domain:
  == domain 1  score: 125.0 bits;  conditional E-value: 9.1e-41
                    SS-EEE--SSSSBSEEEEEEETT-.....---EE-SSSEEEEEESSS-T...TTSSCEEEEEEEE-SS-EE-TTS-EEEESS-EEEEB-TTS-BSS CS
  Ribosomal_L14   4 lktrlkvaDNsgakevecikvlggk....krkaasvGdiivvsvkkakpkgkvkkgdvvkavvvrtkkevrrkdGsvirfddnaaVllnkkgeplG 95 
                    ++++l++aDNsgak++++++v g++    + +aas+Gd+i+++vkk+kp     +++++ a+vvr++k +rrkdG+++ f+dna V++n kge++G
     EPX70990.1  21 VQAILNCADNSGAKNLYIVSVFGTGarlnRLPAASCGDMILATVKKGKP---DLRKKIMPAIVVRQRKAWRRKDGVFLYFEDNAGVIVNPKGEMKG 113
                    789*******************999555344******************...89****************************************** PP

                    -.B-SBEEHHHHHH.-HHHHHTBSBE. CS
  Ribosomal_L14  96 trifgpvarelrekkflkivslApevl 122
                    + i+gpva+e+++  +++i+s A +v+
     EPX70990.1 114 SAITGPVAKECADL-WPRIASNAGTVV 139
                    *************9.********9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       260  (0.0145016); expected 358.6 (0.02)
Passed bias filter:                      241  (0.0134419); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.28s 00:00:00.69 Elapsed: 00:00:00.44
# Mc/sec: 957.91
//
Query:       EPX70991.1  [L=996]
Description: BUB protein kinase Bub1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.5e-28   98.1   0.4    6.7e-28   97.2   0.4    1.5  1  Mad3_BUB1_I  Mad3/BUB1 homology region 1
      1e-09   38.2   0.0    2.9e-09   36.7   0.0    1.7  1  Pkinase      Protein kinase domain
      5e-06   26.0   0.0    8.6e-06   25.2   0.0    1.3  1  Pkinase_Tyr  Protein tyrosine kinase
  ------ inclusion threshold ------
       0.13   11.8   0.5       0.76    9.3   0.1    2.3  2  Foie-gras_1  Foie gras liver health family 1


Domain annotation for each model (and alignments):
>> Mad3_BUB1_I  Mad3/BUB1 homology region 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.2   0.4   1.5e-31   6.7e-28       5     124 .]      43     167 ..      39     167 .. 0.94

  Alignments for each domain:
  == domain 1  score: 97.2 bits;  conditional E-value: 1.5e-31
                  HHHHHHHTG....-THHHHHHHHHHHHHH-TT-T.TT-HHHHHHHHHHHTTTSGGGTT-HHHHHHHHHHHTTS.......S-HHHHHHHHHHHTTSTT CS
  Mad3_BUB1_I   5 efeeeleeaeegdDpLelwlryikwieesypqsskesgllellerclkkfkdderYknDpRylklwlkyadlv.......eepreifkflaskkiGtk 95 
                   f eele  +e dDp ++w+r+++w+e+++    ke++l ++l+++l+++++++  +nD+R+l++wl  ++++       +e+++ f  la+kkiG +
   EPX70991.1  43 VFTEELEVVDELDDPVDVWYRCVEWLESTQYL--KENTLPKVLDDALTYLEKCKFAQNDVRHLRIWLVKIHQLcdspemfTEATHEFYNLARKKIGIE 138
                  6899999999*******************999..79*******************************9998555999888889999999********* PP

                  BHHHHHHHHHHHHHTT-HHHHHHHHHHH. CS
  Mad3_BUB1_I  96 lalfYeewAellekkgrfkeAeevyelGi 124
                  l+lfYee+A+ll ++gr+keA+ev+++G+
   EPX70991.1 139 LSLFYEEYASLLVRMGRWKEASEVLQTGV 167
                  ***************************96 PP

>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.7   0.0   6.4e-13   2.9e-09       4     198 ..     673     911 ..     670     949 .. 0.73

  Alignments for each domain:
  == domain 1  score: 36.7 bits;  conditional E-value: 6.4e-13
                 EEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH...........HHHHHHHHHHHHHS....CTTB--EEEEEEESSEEEEEEE--TTEBHHH CS
     Pkinase   4 leklGeGsfGkVykaveketgkivAvKkikkekakkkke...........kkvlrEikilkklk....hpnivrlyevfeekdelylvleyveggelad 87 
                 ++klG+G+f+ Vy a+e  ++ +v  K  +   ++k                +++E    k+++       i+ +y+     ++ +l+++y ++g++ d
  EPX70991.1 673 ISKLGQGAFAPVYLAKELPSESEVSKKDENGTIDSKLYAlkiespsspieYYLTQEA--RKRMSdsrdIASILPVYYLSIYRNSSHLLMDYRPQGSVLD 769
                 689**************9999999998766665555544666665555432233332..223334113455555555555599999**********888 PP

                 HHH......HHSS.--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEE.T....................TTEEEE-SGTTSEESSSSCSBCTTT CS
     Pkinase  88 lle......rkgs.lseeeakkiakqilegleylHskgiiHrDlKpeNiLid.e....................kgelKitDFGlakelessskltsfv 158
                 l++       ++  ++e  + ++  + l+ +e lHsk+iiH DlK +N L+  e                    ++ + ++DFG    ++  ++ t+f+
  EPX70991.1 770 LVNslrnssSSVPgIDEMLVFFFSIEFLRIIEGLHSKQIIHGDLKADNALLRlEavndlewdasyspegycgwsSKGIFLIDFGRGLDMSLFKPNTKFM 868
                 88877776433336888899999*****************************7778888887777776666664444*******999888877766666 PP

                 SCGGGS-HHHH...TTSCBSHHHHHHHHHHHHHHHHHSS-STT CS
     Pkinase 159 gtseYlAPEvl...keneyskkvDvWslGvilyelltgkppfs 198
                 +  e      +   ++++ + +vD+ +l+ i+ ++l+g+ +  
  EPX70991.1 869 ANWETDLQDCIemrEGEPWTYQVDYHGLAAIIHTMLFGQYIET 911
                 6555555566655588999*******************98766 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.0   1.9e-09   8.6e-06       3     137 ..     672     821 ..     670     827 .. 0.76

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 1.9e-09
                  EEEEEEEESSEEEEEEEEET.......TTTSSEEEEEEEEESTTSSHHH.HHHHHHHH.HHHHTS.-BTTB--EEEEEESSSSEEEEEE--TTE...B CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkg.......ekekkevkVavKtlkeeateee.keelleea.kimkkl.khpnivkllgvctkeepllivteyvkgG...d 87 
                  + +klG+Gaf+ V+ ++          ++e+ +++  +  lk e+ ++  +  l++ea k m++  +   i+ ++ + + +++  ++++y ++G   d
   EPX70991.1 672 IISKLGQGAFAPVYLAKELPsesevskKDENGTIDSKLYALKIESPSSPiEYYLTQEArKRMSDSrDIASILPVYYLSIYRNSSHLLMDYRPQGsvlD 769
                  5689************99888888854334444444444455555444424556667636799998999999999999999999**********7777 PP

                  HHHHHHHTCTTTSBHHHHHHH..HHHHHHHHHHHHHTTEEEST-SGGGEEEE CS
  Pkinase_Tyr  88 LlkfLrkkekekltlkdllsf..alqvAkGmeyLeskklvHrdlaarNvLls 137
                  L + Lr+++++   ++++l f  +++  + +e L+sk+++H dl a N Ll+
   EPX70991.1 770 LVNSLRNSSSSVPGIDEMLVFffSIEFLRIIEGLHSKQIIHGDLKADNALLR 821
                  889999998877778887766115566899********************97 PP

>> Foie-gras_1  Foie gras liver health family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.1   0.00017      0.76     172     215 ..     119     165 ..     111     172 .. 0.94
   2 ?   -0.8   0.1      0.21   9.2e+02     132     173 ..     703     743 ..     684     749 .. 0.73

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00017
  Foie-gras_1 172 lLekaleeFskrkqtRlaeelsl...eiAeeylrlgdwkkalellqp 215
                  ++ +a++eF +   +++  elsl   e A  ++r+g+wk+a+e+lq+
   EPX70991.1 119 MFTEATHEFYNLARKKIGIELSLfyeEYASLLVRMGRWKEASEVLQT 165
                  6889*****************************************96 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.21
  Foie-gras_1 132 ssiassayvydtylapepheeyplsgseekgvahskliidlL 173
                  + i s++y+ + +++p+   ey l+++  k++ +s +i+ +L
   EPX70991.1 703 GTIDSKLYALK-IESPSSPIEYYLTQEARKRMSDSRDIASIL 743
                  44555555543.5889999999999999*********99887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (996 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       546  (0.0304535); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.72u 0.33s 00:00:01.05 Elapsed: 00:00:00.48
# Mc/sec: 6177.01
//
Query:       EPX70992.1  [L=220]
Description: hypothetical protein SOCG_01213 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       561  (0.0312901); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.31s 00:00:00.73 Elapsed: 00:00:00.45
# Mc/sec: 1473.20
//
Query:       EPX70993.1  [L=1117]
Description: NAD-dependent glutamate dehydrogenase Gdh2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      3e-63  213.8   0.0    4.4e-63  213.2   0.0    1.3  1  ELFV_dehydrog    Glutamate/Leucine/Phenylalanine/Valine dehyd
      3e-14   51.6   0.1    1.5e-09   36.0   0.0    2.1  2  Bac_GDH          Bacterial NAD-glutamate dehydrogenase
    0.00086   19.2   0.0     0.0064   16.4   0.0    2.5  3  ELFV_dehydrog_N  Glu/Leu/Phe/Val dehydrogenase, dimerisation 


Domain annotation for each model (and alignments):
>> ELFV_dehydrog  Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  213.2   0.0   7.4e-67   4.4e-63       1     242 [.     752    1014 ..     752    1015 .. 0.88

  Alignments for each domain:
  == domain 1  score: 213.2 bits;  conditional E-value: 7.4e-67
                     T--.TTTTTHHHHHHHHHHHHHHHHTTTS-STTEEEEEE--.SHHHHHHHHHHHHCT-EEEEEEESSEEEEETTEE-HHHHHHHHHCSSSSTTH CS
  ELFV_dehydrog    1 GGs.ldrpeaTglGvvyyveemlkklkldslegkrvaisGs.GnvgsyaallltelgakvvavsDssGviydpeGldieellelkeerksvkey 92  
                     GG+ +d+ ++T+l+v+ yve +++kl+ld ++ ++++++G+ G++gs++++l+   +++++ v+D+sGv+ydp Gld+ ell+l++erk+++++
     EPX70993.1  752 GGIpHDKFGMTSLSVRRYVEGIYRKLNLDPTKLSKIQTGGPdGDLGSNEIKLS---NENYIVVIDGSGVLYDPAGLDKSELLRLANERKMIDHF 842 
                     9****************************************************...99************************************ PP

                     SHH..........STSTSEEESHHSHH...................HHSS-SEEEE-.SSTTSB-HHHHTHTH....HTT-SEEE-SSSS-B-H CS
  ELFV_dehydrog   93 kks..........sekkaeyieneeel...................lelkvdilvPc.Atqneideenakali....kngvklvvEgANlpttq 152 
                     ++s                    ++++                   l++k+d++vPc +++ +i+ +n+++li    k ++k++vEgANl++tq
     EPX70993.1  843 DTSklskegyrvlV--------RDNNVklpngevvnngttfrntahLRYKADVFVPCgGRPGAININNVDQLInengKPKIKYLVEGANLFVTQ 928 
                     99999665555542........333444444444688887777766668************************9888789************** PP

                     HHHHHHHHTT-EEE-HHHHTTHHHHHHHHHHHHHHCT----HHHHHHHHHHHHHHHHHHHHHHHHHCT-THHHHHHHHHHHHHHHHHHHC CS
  ELFV_dehydrog  153 eAkeileeagvlvvpdkaaNaGGVtvSslEmlqnlarlswteeevdeklkkimkeifkavveeaeeykqelvkganiagfekvaeamkaq 242 
                     +Ak +le+ gv+v++d++aN+GGVt+SslE+l++   ls+++ ++ e+++ + + i  ++++e+ ++ +e++++++ ++fe ++e +k+q
     EPX70993.1  929 DAKTVLEKTGVVVIRDASANKGGVTSSSLEVLAS---LSFDDSSFIENMCVR-DGIQPEFYNEYVNELKEIIQKNADMEFECLWENHKKQ 1014
                     *********************************9...677**********65.55555555555555555****************9986 PP

>> Bac_GDH  Bacterial NAD-glutamate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.0   0.0   2.5e-13   1.5e-09     605     743 ..     478     627 ..     456     689 .. 0.79
   2 !   13.5   0.0   1.6e-06    0.0095    1055    1100 ..     914     959 ..     904    1026 .. 0.93

  Alignments for each domain:
  == domain 1  score: 36.0 bits;  conditional E-value: 2.5e-13
     Bac_GDH 605 ltfsqeyieetllkhpeiarllvelFearfdpaleeeeeeeee..............ekleeeieeaLdevaslded.rilrrllelieatlRtnfyqk 688
                 l f+++ i++t++++p+++r+l++ F  + +  + ++ + +++              e  +e++ e++++    d+d  i+  ++++ +  l+tnf+ +
  EPX70993.1 478 LAFTRTKIHDTIVQYPQLVRMLFDQFYLQHSIGTGSSPRLHRAktvssesldpqalvELPNEKLVETIQKTCVNDDDvSIMEMFVKFNSHLLKTNFFLT 576
                 5788999*********************9998887776655556788899***877755566666666665444444379999***************9 PP

     Bac_GDH 689 dedgeakeyislKldpskipelPePrPlfE.ifVysprvegvHLRggkvARGGlRW 743
                      +k  +s+++dps +++     Pl+  i    +++ g HLR+ +vARGG+R 
  EPX70993.1 577 -----TKVALSFRFDPSFLDQAQFKDPLYAmIMSVGNEFRGFHLRFRDVARGGIRL 627
                 .....6889************9999998862667899******************6 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 1.6e-06
     Bac_GDH 1055 rakvvgEGgNLGltQlgRiEyalkggrintDaiDNsaGVdcSDhEV 1100
                  ++k + EG+NL +tQ ++    ++g+ +  Da  N +GV +S  EV
  EPX70993.1  914 KIKYLVEGANLFVTQDAKTVLEKTGVVVIRDASANKGGVTSSSLEV 959 
                  578899**************************************99 PP

>> ELFV_dehydrog_N  Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       1.4   8.1e+03      82     110 ..     388     416 ..     385     418 .. 0.82
   2 !   16.4   0.0   1.1e-06    0.0064      24      97 ..     610     690 ..     602     710 .. 0.85
   3 ?   -3.4   0.0       1.4   8.6e+03      64      80 ..     887     903 ..     881     910 .. 0.80

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 1.4
                      S-HHHHHHHHHHHHHHHG.GG-BTTTEEE CS
  ELFV_dehydrog_N  82 lseeeleritrrfvrelakkfiGpgiDvp 110
                       +++++e+++++ ++e++  +  p++D+ 
       EPX70993.1 388 STSTSVEELFGQITKEISLLYCMPHTDID 416
                      567789999*******9997777999985 PP

  == domain 2  score: 16.4 bits;  conditional E-value: 1.1e-06
                      EEEEEE-TTSSEEEEEEEETT--HH...........HHHHHHHHHHHHHHHTTSS-EEEEEEEES-GGGS-HHHHHHHHHHHHHH CS
  ELFV_dehydrog_N  24 yraqhssalgPakGGiRfhpsvnld...........evkaLaalmtyKnalvdlpfGGakggvkidpkklseeeleritrrfvre 97 
                      +r  h + +  a+GGiR+ +s+n +           e   La  + +Kn   d+p GGakg++ ++ k +++ +l  ++++++++
       EPX70993.1 610 FRGFHLRFRDVARGGIRLIKSANTEalnlnarglfdENYNLANTQKLKN--KDIPEGGAKGVILLNSKFQDKPAL--AFQKYIDS 690
                      566677778899*************************************..9***********999987666655..45555555 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 1.4
                      TTSS-EEEEEEEES-GG CS
  ELFV_dehydrog_N  64 vdlpfGGakggvkidpk 80 
                      v +p+GG  g+++i+  
       EPX70993.1 887 VFVPCGGRPGAININNV 903
                      5589********99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1117 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       632  (0.0352502); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.80u 0.30s 00:00:01.10 Elapsed: 00:00:00.47
# Mc/sec: 7178.25
//
Query:       EPX70994.1  [L=354]
Description: Sir2 family histone deacetylase Hst2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-55  186.4   0.0    7.9e-55  185.5   0.0    1.5  1  SIR2        Sir2 family
     0.0059   15.9   4.2      0.009   15.3   4.2    1.2  1  VSG_B       Trypanosomal VSG domain
  ------ inclusion threshold ------
       0.21   11.6   3.0       0.33   11.0   3.0    1.2  1  RP-C_C      Replication protein C C-terminal region
        5.7    7.4   8.8       0.44   11.0   1.8    2.3  2  DUF3795     Protein of unknown function (DUF3795)


Domain annotation for each model (and alignments):
>> SIR2  Sir2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  185.5   0.0   1.8e-58   7.9e-55       1     177 []      36     218 ..      36     218 .. 0.98

  Alignments for each domain:
  == domain 1  score: 185.5 bits;  conditional E-value: 1.8e-58
                 -GGGGGGGT---SSS.TTSHHHHSCHHHHSSHHHHHHHHHHHHH..HHHHHHHHHHCCTSS--HHHHHHHHHHHTTCEEEEEES-SSSHHHHTT-S..S CS
        SIR2   1 GAGiStesGipdfRs.keGlyaklakeelaspealfskkllvee..vfyniarellaeeaepnaaHkalkklekkgkllrliTQNiDgLekkaGsk..k 94 
                 GAGiSt++GipdfRs k+G+y++l++ +l   ea+f+ ++++++  +fy++a el++e++ p+ +H++++ l +kg l+r++TQNiD+Le+ aG+    
  EPX70994.1  36 GAGISTAAGIPDFRSpKTGIYNNLQRFNLPYAEAVFDLSYFRKNprPFYELAYELMPEKFRPTYTHYFIRLLHDKGLLKRCYTQNIDTLERLAGIPedL 134
                 9*******************************************99*************************************************9889 PP

                 EEETTEEEEEEEETTTSBEEECCGGHCHHHCCTT.B-TTTCCBEEEEE--CTSB-SHHHHHHHH.HHHH-SEEEEES--STSTT CS
        SIR2  95 vvelHGslakakcvkcekkldkeelqeeieaekvpecekcgkllkpdvvfFGealpdklkklie.kveeadlllviGtSlkVap 177
                 +ve+HGs++  +c++c +  d+e++++ i++++vp+c +c++ +kp ++f+Ge lp+++++ +e +++++d+ lv+GtSl V+p
  EPX70994.1 135 LVEAHGSFQYSRCIECYEMSDTEYVRSCIKQKQVPQCVHCKGFVKPMITFYGEGLPSRFFEEMEdDTTNCDMALVLGTSLLVHP 218
                 ********************************************************888888887*****************98 PP

>> VSG_B  Trypanosomal VSG domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   4.2     2e-06     0.009      23     114 ..     260     347 ..     253     354 .] 0.73

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 2e-06
       VSG_B  23 FkaLCaiiklaeaapeaikdeqevtkileeiealnlsladedwlnkfaeeeddakatktkkaakkncgalkafWkeakkaakakkkkeltrp 114
                  + LC+++ + e+  +  ++  ++++i+eei +l + + ++d ++  ++++++  +++ ++++++++ ++k++ k+ + +a++++k+e++++
  EPX70994.1 260 IRSLCEMLGWSEDLDKLATP--DIDTIAEEIAQLSVKTETDDKQKDEEKNNKT--QKEHSYSSTEQADDQKEAKKTGATSASSSSKAEKPIS 347
                 56799999999987777766..9***************999999876555544..5667777777777777777776666666666555554 PP

>> RP-C_C  Replication protein C C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   3.0   7.4e-05      0.33       6      94 ..     257     343 ..     254     353 .. 0.52

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 7.4e-05
      RP-C_C   6 eqrfralverlprkatlaeleelleelealreevenal...esalkaenssanesqnerhiqnsnpdsssese.pasekereekeaaaasaea 94 
                 e ++r+l e l  +++l++l+    ++++++ee++++    e+     +++ +e++n+ ++++s +  +++ + ++ +k+++++ a+++s+ +
  EPX70994.1 257 EVHIRSLCEMLGWSEDLDKLA--TPDIDTIAEEIAQLSvktETD---DKQKDEEKNNKTQKEHSYSS-TEQADdQKEAKKTGATSASSSSKAE 343
                 567888899999999999995..488899999999888444444...44444444444444444431.1111112222222222222222222 PP

>> DUF3795  Protein of unknown function (DUF3795)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   1.8   9.7e-05      0.44      35      78 ..     139     177 ..     114     180 .. 0.80
   2 ?   -0.5   0.8      0.38   1.7e+03      24      30 ..     309     317 ..     291     346 .. 0.43

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 9.7e-05
     DUF3795  35 llaleeikCeGCreeekkalaeeCkirkCakekglefCaeCeef 78 
                 + +++  +C  C e + + +     +r+C k+k++  C++C+ f
  EPX70994.1 139 HGSFQYSRCIECYEMSDTEY-----VRSCIKQKQVPQCVHCKGF 177
                 55677788999998888876.....89**************977 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.38
     DUF3795  24 kkkkk..ea 30 
                 k++k+   +
  EPX70994.1 309 KTQKEhsYS 317
                 111112211 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (354 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2134  (0.119025); expected 358.6 (0.02)
Passed bias filter:                      874  (0.0487478); expected 358.6 (0.02)
Passed Vit filter:                       128  (0.00713927); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.40
# Mc/sec: 2682.85
//
Query:       EPX70995.1  [L=1012]
Description: DUF814 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-33  116.5  11.9    1.3e-33  116.5  11.9    3.3  2  FbpA       Fibronectin-binding protein A N-terminus (FbpA)
    8.5e-28   97.2   0.0    4.8e-27   94.8   0.0    2.4  1  NFACT-R_1  NFACT protein RNA binding domain
    8.9e-16   57.7   0.0    8.9e-16   57.7   0.0    3.2  4  NFACT-C    NFACT protein C-terminal domain


Domain annotation for each model (and alignments):
>> FbpA  Fibronectin-binding protein A N-terminus (FbpA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.5  11.9   2.1e-37   1.3e-33       2     413 ..       7     534 ..       6     549 .. 0.78
   2 ?   -7.1   7.5         3   1.8e+04     306     357 ..     841     894 ..     806     914 .. 0.50

  Alignments for each domain:
  == domain 1  score: 116.5 bits;  conditional E-value: 2.1e-37
                 HHHHHHHHHHHHHHHTTXEEEEEEEEETTEEEEEEEETTEEEEEEEEXXTTTXEEEEXXXXXXXXSSXXHHHHHHHHHHTTXEEEEEEEXTTSSEEEEE CS
        FbpA   2 glvlaavvaELqkellggridkiyqpekdelvltlranrgrhkLllsahpsyarihltekpkenpkeppnFcmlLRkyLkgarivsieqlgfdRivels 100
                 +l+++a+ aEL++e++g r+++i+   +++  l++ ++++++ L+++    + r+hlt+ ++e +++ + F+  LRk++k  r+++++ql+ dR++ ++
  EPX70995.1   7 ALDITAIGAELREEIIGCRLNNIHDLSSRSFLLKFGKQDKKYSLVIES---GFRVHLTKFQRE-NAQLSGFVSKLRKHIKSRRLTNVSQLDTDRVLVFT 101
                 6899********************************************...********9995.567799***************************** PP

                 EEEE.XTTSXEEEEEEEEEXXGGGXEEEEEETTTEEEEESSXBXXXSSXSXXBSTTXBXXXSXXXSXBXTT........SXXH.HHHHHHHHH...... CS
        FbpA 101 iekr.dElgdeeeytLivEimgrhSNiiLvdeenkIidaikhvspkqsrvReilpgekYelPpsqdklnPl........eaeeleefkellsk...... 184
                 +    ++ +   +y L++E ++  +N++L+d + kI+ +++ v++++++      g++Y+l  s   +n          ++e+l ++ e + +      
  EPX70995.1 102 FGGGeNDQDPSWTYYLVCEFFAA-GNVLLLDGSHKILSLLRVVTFDKNQ--VYAVGQQYKLDQSRLTHNVGnhqkmpqmTFEKLTQLLEEVAEtskaek 197
                 *98824445566888********.**********************888..7888******99865555443333333655555544443222344444 PP

                 ............S.XXXHHHHHHHBTTXXHHHHHHHHTTXSSSH.................HHHHHHHHTXXX.......................... CS
        FbpA 185 ............kekdlvkaLvkafqGlspllaeelleragldketsakelseed..lerlyealqelleele.......................... 243
                             k  + +kaL  ++   +++l+e  +++ +ld+  +a++ls+++   ++l +a+qe     +                          
  EPX70995.1 198 naasqkpngkqpKPITFRKALTVRLGEYGNALVEHCIRQSNLDPLLPADQLSADEdkKKELLSAFQE----ADgilssmvkppvkgyifstqqsvladp 292
                 55555665554444567899*****99******************9999998764114445555544....3355558889*********999887766 PP

                 .........XXEE........XSSSEESSX.XTTXX..SSXXXXSXHHHHHHHHTTTXXX--SHHHHHHH....HHHHHHHHHHHHHHHHHHHHHHHHC CS
        FbpA 244 .....eekfepqlvlkee...kpeefsvvp.lksls.elekesfdslsealdeyYakkaerdrveqkrsd....lekrveneleklekklkklekelek 328
                      e   +       +     e+f++++ l+  + +   ++f s +e++de+++  +++ ++e++++d     e+r++++ + +ekk+k l++  + 
  EPX70995.1 293 sasstE--EK-------KhvlMYEDFHPFKpLQLVQaNRVCSEFHSYNECVDEFFSSLETQ-KMEKRAHDrvmtAERRIHSAKDDQEKKIKGLQEVQQV 381
                 554321..11.......1223467788886455554355559*************875544.4444444312115777999999999999999875443 PP

                 CGGH.HHHHCCHH----....-------------------.--........................................................ CS
        FbpA 329 aeka.enyrligellta....ylyaikkgmsevelenyydege........................................................ 366
                 ++ + e ++   el  a    +++ +++gm+++++e+ ++ ++                                                        
  EPX70995.1 382 SALKaEAIETNSELVEAvasyINNLLNQGMDWLDIEKLIQVQKrrnpvaacivlplklkhnsvdimlpnpialsesadddyelsdeeeleadssekpkq 480
                 332235555555555541111556679*************84469****************************************************** PP

                 ...---------------HHHHHHHHH....HHHHHHHHHHHHHHHHHHHHHHH CS
        FbpA 367 ...evtIpLdprkspsenAqkyfkkyk....Klkraveaveeqieetkeeleyl 413
                    +v +++d ++ +  nA + ++k +    K  ++ ea+ +++++t++++e  
  EPX70995.1 481 nvsNVVVEIDLSLGAYANARRHYEKRReaivKETKTLEAASKALKNTQKRIEQD 534
                 ************************98734446678899************9964 PP

  == domain 2  score: -7.1 bits;  conditional E-value: 3
                 HHHHHHHHHHHHHHHHHHHHHHCCGGH..HHHHCCHH----------------- CS
        FbpA 306 krveneleklekklkklekelekaeka..enyrligelltaylyaikkgmseve 357
                 +++e + e  e   ++l k le++ k   e+ r   ++   ++++ +k++++ +
  EPX70995.1 841 EELEIQKEESETNTEDLDKSLENTFKGskETGRNEKDITELNSQRTEKKKKQTT 894
                 223333333333333333333333222334444444443333333333333333 PP

>> NFACT-R_1  NFACT protein RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.8   0.0   8.1e-31   4.8e-27       1     109 []     557     668 ..     557     668 .. 0.97

  Alignments for each domain:
  == domain 1  score: 94.8 bits;  conditional E-value: 8.1e-31
   NFACT-R_1   1 kvfwFkssdgylvimGkDkqeneelikkyleesdvwfhvdkessahvylrlsegeleeipeelleeaaqlakanSia.gnklssvdvvyvpasnlskta 98 
                 k++wF ss+gylv++G+D+q+ne l+ +y + +dv++ +d   s+ v++++++++ +++p+++l++a+ la a S+a ++k+  +++++v+ +++skt+
  EPX70995.1 557 KFHWFFSSEGYLVMGGRDAQQNELLFTRYCNAGDVFVCADLPKSSVVIVKNRNAN-DPLPPNTLQQAGSLALASSKAwDSKT-VISAWWVQIDQVSKTG 653
                 8*************************************************77777.9********************88888.**************** PP

   NFACT-R_1  99 p....ldtGsvgfkg 109
                      l++Gs+ ++g
  EPX70995.1 654 YagdvLPAGSFAIRG 668
                 999********9986 PP

>> NFACT-C  NFACT protein C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.4      0.46   2.8e+03      56      95 ..     332     381 ..     328     391 .. 0.44
   2 ?   -3.7   0.4       1.9   1.1e+04      52      93 ..     515     542 ..     506     551 .. 0.42
   3 ?   -2.5   0.0      0.81   4.8e+03      46      77 ..     867     899 ..     849     912 .. 0.58
   4 !   57.7   0.0   1.5e-19   8.9e-16       6     105 ..     910     999 ..     905    1000 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.46
     NFACT-C  56 eilekflk..kkkkvdekeed........keklwprekelikalkeeelv 95 
                 e+++ f++  +++k++++++d         +++++ +++ ik+l+e + v
  EPX70995.1 332 ECVDEFFSslETQKMEKRAHDrvmtaerrIHSAKDDQEKKIKGLQEVQQV 381
                 55666666442233333333322222111333333334445555555444 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 1.9
     NFACT-C  52 kavkeilekflkkkkkvdekeedkeklwprekelikalkeee 93 
                 k+++ + + + +              +++r ++ +k   ++e
  EPX70995.1 515 KTLEAASKALKN--------------TQKRIEQDLKRSTNAE 542
                 333333333333..............3333222333333333 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 0.81
     NFACT-C  46 GsvKkGkavkeilekflkkk.kkvdekeedkek 77 
                 Gs   G+  k+i+e   +++ kk+++++ ++e+
  EPX70995.1 867 GSKETGRNEKDITELNSQRTeKKKKQTTIERED 899
                 455556666666665555221222222222333 PP

  == domain 4  score: 57.7 bits;  conditional E-value: 1.5e-19
     NFACT-C   6 slldsLvgtplpeDeileaipvcAPyaaLqkykYkvKlqPGsvKkGkavkeilekflkkkkkvdekeedkeklwprekelikalkeeelvntlpvgkvk 104
                  + d+L+++p +eD++++a+p +APy+++ ++  kvK++PGs K Gk+++e +++f+k             k ++ e++++ +lk+ e+v  + v++++
  EPX70995.1 910 YARDALTPSPDAEDVVVNAVPTFAPYSTMVRFNLKVKVTPGSGKVGKSARESINYFIK----------ALGKPASDEVKILENLKDGEIVAPFSVNRLR 998
                 56799*****************************************************..........3445566688888888888888888888888 PP

     NFACT-C 105 v 105
                 v
  EPX70995.1 999 V 999
                 7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1012 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2200  (0.122706); expected 358.6 (0.02)
Passed bias filter:                      566  (0.031569); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.91u 0.30s 00:00:01.21 Elapsed: 00:00:00.45
# Mc/sec: 6801.15
//
Query:       EPX70996.1  [L=286]
Description: prohibitin Phb2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.2e-20   73.4   0.4      3e-20   73.0   0.4    1.2  1  Band_7         SPFH domain / Band 7 family
  ------ inclusion threshold ------
      0.014   14.5   0.1      0.018   14.1   0.1    1.1  1  YdfA_immunity  SigmaW regulon antibacterial


Domain annotation for each model (and alignments):
>> Band_7  SPFH domain / Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.0   0.4   3.3e-24     3e-20       3     170 ..      48     214 ..      46     226 .. 0.91

  Alignments for each domain:
  == domain 1  score: 73.0 bits;  conditional E-value: 3.3e-24
      Band_7   3 ieegevgvvvr.fGklsr.vlepGlhfilPfgrsvtvvsvrvqtldvsvsltvptkDglpvtidvtviyrv.pddapklvaaveresanldnlirrvle 98 
                 ++ g++ + +   G ++  +++ G+hf +P++++ + ++vr    +vs    + tkD ++v+i+ +v  r      pk+++++  + ++ ++++ ++++
  EPX70996.1  48 VDGGHRVIKYSrIGGVKNfIYPEGTHFLIPWIETPIDYDVRAKPRNVSS--LTGTKDLQMVNINCRVLSRPdVQALPKIYRTL--GGDYDERVLPSIVN 142
                 778888888555666666899****************************..777*************9987668999999999..9************* PP

      Band_7  99 salrevisemtleellsnreelaeelknelneqlrkyGvevldvritdidpppevaqalaakqaaeaeaqae 170
                 ++l++v++++++ +l+  re +   +++ l ++++++++ + dv++t+++++pe+ +a++akq a+++aq +
  EPX70996.1 143 EVLKSVVAQFNASQLITQRERVSRLVRENLMKRAARFNILLDDVSLTHVQFSPEFTAAVEAKQIAQQDAQRA 214
                 ********************************************************************9543 PP

>> YdfA_immunity  SigmaW regulon antibacterial
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.1     2e-06     0.018     145     240 ..     114     214 ..      87     244 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2e-06
  YdfA_immunity 145 arvtvra..nierlvGgageetiiarvGegivttiGsaeshkevlenPdsisktvlekgldagtafeilsidi..advdvgenigaklqadq.aea 235
                    +r  v+a  +i r +Gg  +e ++  + + +++++ +  +  +++ + +++s+ v e+ +  ++ f+il  d+  + v+ +    a ++a+q a+ 
     EPX70996.1 114 SRPDVQAlpKIYRTLGGDYDERVLPSIVNEVLKSVVAQFNASQLITQRERVSRLVRENLMKRAARFNILLDDVslTHVQFSPEFTAAVEAKQiAQQ 209
                    33333332278899*******************************************************766511678888888888877664455 PP

  YdfA_immunity 236 dkkia 240
                    d + a
     EPX70996.1 210 DAQRA 214
                    55544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       514  (0.0286686); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 1989.75
//
Query:       EPX70997.1  [L=112]
Description: 60S ribosomal protein L34 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.4e-42  142.0   0.4    6.9e-42  141.7   0.4    1.1  1  Ribosomal_L34e  Ribosomal protein L34e


Domain annotation for each model (and alignments):
>> Ribosomal_L34e  Ribosomal protein L34e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.7   0.4   3.8e-46   6.9e-42       1      94 []       1      94 [.       1      94 [. 1.00

  Alignments for each domain:
  == domain 1  score: 141.7 bits;  conditional E-value: 3.8e-46
  Ribosomal_L34e  1 MvqrltyrrrlsYntrsnkvrvvktpggklvyqykkkkgkapkCgdckkkLqGipalrpkelsrlsktkktvsRaYGgslcakcvkerivrafl 94
                    M+qr+tyrrrl+Yntrsnk+r++ktpg+kl+y+++kk g+ p+Cgd++  LqGipalrp+e++rls++kktv+RaYGg l+a++vk+rivrafl
      EPX70997.1  1 MAQRVTYRRRLAYNTRSNKTRIIKTPGNKLRYLHIKKLGTIPRCGDTGVPLQGIPALRPREFARLSHNKKTVQRAYGGNLSANAVKDRIVRAFL 94
                    9********************************************************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       419  (0.02337); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                         8  (0.000446204); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 800.70
//
Query:       EPX70998.1  [L=718]
Description: vacuolar transporter chaperone complex subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-96  323.6   0.1      1e-96  323.6   0.1    1.5  2  VTC       VTC domain
    7.8e-19   68.8  20.9    8.6e-07   29.2   0.1    4.2  4  SPX       SPX domain
      3e-10   40.4   3.0    5.8e-10   39.5   3.0    1.5  1  DUF202    Domain of unknown function (DUF202)


Domain annotation for each model (and alignments):
>> VTC  VTC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1      0.67     4e+03      91     132 ..      27      70 ..      10     120 .. 0.53
   2 !  323.6   0.1  1.7e-100     1e-96       1     275 []     194     463 ..     194     463 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 0.67
                 EEEEEE--------EEEEE.EEE-GGGHHHHH---HHH.HHHHH CS
         VTC  91 lErktkheswtgesstker.ftlkqkfvksyllgrlpa.eerle 132
                  E+k+++++   ++ ++   ++l +k+++++ +++  + ee+le
  EPX70998.1  27 KEIKKRNDDGGWSEEDESDfVELLEKELDKVYSFQKAKsEETLE 70 
                 44444433322222222221234444444444333333223333 PP

  == domain 2  score: 323.6 bits;  conditional E-value: 1.7e-100
                 --EEEEEEE-HHHHHHHHHHHHTTS-B----------------------EEEEEEE-TT-HHHHHHHHT-TT--EEEEEEES-GGG--EEEEEEEE--- CS
         VTC   1 nrnetKywvhsdnvvevktlilkhlpvlvygaseeeiaaallrksadqtitsvYfDnndfelyenrilkmegaekiRlRwygkldnedvflErktkhes 99 
                 +r++tKywvh++nv+e+k +ilkhlpvlv++ ++e         ++d++i+s+Y+Dn+d+e+y  r++k egae iRlRwyg+++n+++f+Erkt++e+
  EPX70998.1 194 VRQTTKYWVHPSNVTELKLYILKHLPVLVFNPNKEF-------TREDSAISSIYYDNDDLEFYLGRLEKHEGAEAIRLRWYGSMENNNIFVERKTHRED 285
                 69*****************************99999.......89****************************************************** PP

                 -----EEEEEEEE-GGGHHHHH---HHHHHHHHHHHHHT-..HHHHHHHHHHHHHHHHHHHHTT-EEEEEEEEEEEEE--TT--SEEEEEEEEEEEEE- CS
         VTC 100 wtgesstkerftlkqkfvksyllgrlpaeerleklkkkee..ekevekleqlaeeiqntilrnslqPvvrtsYlRaaFqlstdnavRitiDtnlcmvre 196
                 wtge+s k+rf+lk+k+v+++l+g ++++e++ k++k+++   +e+e+le+la+e+q+t+l + ++P vr  Y+R+aFql++d +vRi++D+nl  vre
  EPX70998.1 286 WTGEKSVKARFPLKEKNVNAFLRGDYTVKEAFAKMRKEGKkpISEIENLERLAKEVQYTVLSKGMKPYVRSFYERTAFQLPGDARVRISLDSNLALVRE 384
                 ****************************************776899***************************************************** PP

                 ---SSSS-SS-TSS-SSTTSS-TTTT--GGGEEE--SEEEEEEE--...----HHHHHHHTSTT-EE-TT--HHHHHHHHHH CS
         VTC 197 dsfeerrkledtwerldedvqqpvkllrkgevvrfpyavlEvKlqt...skspewiqeLlashlvievpkfSKYqhgvaslh 275
                    +  ++  ++w+r+d+++++p++ + +++vvrfpya+lEvKlqt   +  pew+++L++shlv++vpkfSK++hgv sl+
  EPX70998.1 385 ---DGPNRAGNNWRRMDIGIDYPFNQIPDEDVVRFPYAILEVKLQTqfgQDPPEWVNNLVNSHLVEAVPKFSKFIHGVSSLF 463
                 ...778888899************************************99*****************************996 PP

>> SPX  SPX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   2.8   1.2e-09   7.1e-06       1      31 [.       1      31 [.       1      35 [. 0.97
   2 !   16.6   2.6   9.8e-07    0.0058     182     222 ..      42      82 ..      31      98 .. 0.82
   3 !   29.2   0.1   1.4e-10   8.6e-07     349     377 ..     114     142 ..     100     146 .. 0.88
   4 !    7.2   0.3   0.00068       4.1      93     197 ..     478     576 ..     322     590 .. 0.69

  Alignments for each domain:
  == domain 1  score: 26.2 bits;  conditional E-value: 1.2e-09
         SPX  1 MKFakeLeenlvpEWrdaYldYkqLKKlIkk 31
                MKF++ L+e+lv E +  Y++Y++LKK Ikk
  EPX70998.1  1 MKFGQLLKETLVREYQYSYVNYDKLKKEIKK 31
                ******************************8 PP

  == domain 2  score: 16.6 bits;  conditional E-value: 9.8e-07
         SPX 182 aekeFferLdseLnkvetFykakeeefterlesLrkqleal 222
                  e++F+e+L +eL+kv +F+kak ee +er+   ++q + +
  EPX70998.1  42 DESDFVELLEKELDKVYSFQKAKSEETLERIRYCEEQTSDA 82 
                 6899**************************98777766665 PP

  == domain 3  score: 29.2 bits;  conditional E-value: 1.4e-10
         SPX 349 lLKsYqeLNrtAFrKIlKKfDKvtaltas 377
                 +L +++eLN tAF KI KK+DK t+  ++
  EPX70998.1 114 DLAKFCELNYTAFYKIVKKHDKHTSWSLK 142
                 799********************987655 PP

  == domain 4  score: 7.2 bits;  conditional E-value: 0.00068
         SPX  93 slprrsplsrssrssssygglvssppsansssssddssesnpadssssssssesesssssspsllrrlfs......esesreeksersyetrplr.... 181
                 s + r+p ++s r+ +s+++ +ss+ s++ s+s++++s++       ++++  ++ss+ +++ +++r ++      e++s              +    
  EPX70998.1 478 SVDIRKPVNNSVRPVKSFSDAPSSSASQHVSDSENTQSSNI-----LDEEARIPSSSGVRRNGSIHRAHDqfddldEHSSLL------------Nvger 559
                 55667888888899999999999998888888888888888.....333333334444444444444422222333222222............13333 PP

         SPX 182 .aekeFferLdseLnkv 197
                  +++ F++  +  L+++
  EPX70998.1 560 kNDESFITAVTTKLKSI 576
                 45555555555555444 PP

>> DUF202  Domain of unknown function (DUF202)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.5   3.0   9.8e-14   5.8e-10       1      66 [.     619     680 ..     619     682 .. 0.90

  Alignments for each domain:
  == domain 1  score: 39.5 bits;  conditional E-value: 9.8e-14
      DUF202   1 rdglAnERTfLaWlRtslalialglallrffltgepsalgkilglilivlgiltllvglvrylrrq 66 
                 ++++A ERT+L +lR s++++++g++l++f    +++++g +++  + ++++ ++++ +  yl+r+
  EPX70998.1 619 KTYFALERTYLDYLRYSILMGSIGITLFNF----SHNRAGILAASCFTLVALSAIIYTTLLYLWRA 680
                 689**************************8....455557999999*************9999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (718 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       741  (0.0413297); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.29s 00:00:00.90 Elapsed: 00:00:00.42
# Mc/sec: 5130.32
//
Query:       EPX70999.1  [L=556]
Description: phosphoribosylaminoimidazole carboxylase Ade6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.8e-65  218.4   1.2    5.4e-65  217.5   1.2    1.5  1  AIRC             AIR carboxylase
      7e-65  217.8   0.0    1.1e-64  217.1   0.0    1.3  1  ATP-grasp        ATP-grasp domain
    6.4e-20   70.6   0.0    1.2e-19   69.7   0.0    1.5  1  PurK_C           Phosphoribosylaminoimidazole carboxylase C-t
    6.7e-05   22.5   0.0    0.00013   21.6   0.0    1.5  1  CPSase_L_D2      Carbamoyl-phosphate synthase L chain, ATP bi
    0.00044   19.8   0.0      0.001   18.6   0.0    1.6  1  Dala_Dala_lig_C  D-ala D-ala ligase C-terminus
  ------ inclusion threshold ------
      0.078   12.5   0.0        0.2   11.2   0.0    1.7  1  PrpR_N           Propionate catabolism activator
       0.12   11.6   1.5       0.14   11.4   0.1    1.8  2  AlaDh_PNT_C      Alanine dehydrogenase/PNT, C-terminal domain


Domain annotation for each model (and alignments):
>> AIRC  AIR carboxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  217.5   1.2   2.1e-68   5.4e-65       2     147 ..     392     537 ..     391     538 .. 0.99

  Alignments for each domain:
  == domain 1  score: 217.5 bits;  conditional E-value: 2.1e-68
                 EEEEESSGGGHHHHHHHHHHHHHTT-EEEEEE--TTTSHHHHHHHHHHCHTTTEEEEEEEEESS--HHHHHHHHSSS-EEEEEE--STTCCHHHHHHHH CS
        AIRC   2 VgiimGSdsDlevmkkaaeilkelgveyevrvvSahrtpeelleyaeeaeerglkviIagAGgaahLpgvvaslttlPVigvPvkskalkgldsllSiv 100
                 VgiimGSdsDl+ mk+aa il++++v+yev++vSahrtpe++++ya++a++rgl+viIagAGgaahLpg+va++t+lPVigvPvk ++l+g+dsl+Siv
  EPX70999.1 392 VGIIMGSDSDLSKMKDAAVILDQFKVPYEVTIVSAHRTPERMVSYARTAASRGLRVIIAGAGGAAHLPGMVAAMTPLPVIGVPVKGSSLDGVDSLHSIV 490
                 9************************************************************************************************** PP

                 T--TTS--EE-SSTHHHHHHHHHHHHHTTT-HHHHHHHHHHHHHHHH CS
        AIRC 101 qmPsgvpvatvaigkaknAallAaqilalkdeelaekleeyreelke 147
                 qmP+gvpvatvai++++nA+llA++ila  +++l ++leey++++++
  EPX70999.1 491 QMPRGVPVATVAINNSTNAGLLACRILASFRPDLLHALEEYMDNMRD 537
                 ******************************************99875 PP

>> ATP-grasp  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  217.1   0.0   4.5e-68   1.1e-64       2     171 .]     112     282 ..     111     282 .. 0.99

  Alignments for each domain:
  == domain 1  score: 217.1 bits;  conditional E-value: 4.5e-68
                 HTTT--B-EEEEECCHHHHHHHHHHH-SCEEEEESSS-CTTTTEEEECTCCGHHCHHHHCGTTCEEEEE----SEEEEEEEEEETTC-EEE--EEEEEE CS
   ATP-grasp   2 eklglpvprflaveskeeleeaaeelglpvvvKarrlgydGkGqsvvrseedleqalealkeekvivEefvpfekElsvlvvrsaeGetafypvvetvq 100
                 ++ ++++p+f+ + +++++e+a +++g+p+v+K+++l+ydG+G++vvr+++d+++ ++al++++++vE+fvpf++E++v+vvr+ +G++++yp++et+q
  EPX70999.1 112 QTFHIALPDFCDAPDQAAVENAGQKFGYPFVLKSKTLAYDGRGNYVVRQPQDIPDGIKALGDRPLYVEKFVPFSMEIAVMVVRTLDGKVYAYPTTETIQ 210
                 7789*********************************************************************************************** PP

                 ETTEEEEEEECEE-SCHHHHHHHHHHHHHHHHHTSSEEEEEEEEEETTCT.EEEEEEESS--GGGGGHHHHB CS
   ATP-grasp 101 edgilrlsvapaevsekaqkkaeeiakkiveeLggvGvfavElFvledge.llvnElapRpHnsGhvtldaa 171
                 +d+i++l++apa+++++ qk+a+++a ++v+++ g+G+++vE+Fvl+dge +l+nE+apRpHnsGh+t++a+
  EPX70999.1 211 RDNICHLVYAPARLPHHLQKRAQTLAMDAVRTFKGAGIYGVEMFVLQDGEsVLLNEIAPRPHNSGHYTIEAC 282
                 **********************************************************************98 PP

>> PurK_C  Phosphoribosylaminoimidazole carboxylase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.7   0.0   4.8e-23   1.2e-19       1      56 []     313     372 ..     313     372 .. 0.91

  Alignments for each domain:
  == domain 1  score: 69.7 bits;  conditional E-value: 4.8e-23
      PurK_C   1 avMvNlLGedae....ekleellaipgahlHlYgKeearpgRKmGHitvvgdsaeeleer 56 
                 a+MvNlLG ++     +  ++ l ipga+lHlYgK e+r+gRKmGHit+++ds +e+e+r
  EPX70999.1 313 ALMVNLLGGEDPcyvsRIAKRSLTIPGATLHLYGKGESRKGRKMGHITIIADSSQECERR 372
                 89*********9888555555***********************************9986 PP

>> CPSase_L_D2  Carbamoyl-phosphate synthase L chain, ATP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   4.9e-08   0.00013      19     179 ..     121     270 ..     103     307 .. 0.74

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 4.9e-08
                  EECSSBSSHHHHHHHHHHH-SSEEEEE.TTCCTTTTEEEESSHHHHHHHHHHHHHHHHHHHSTS-EEEEE--SSSEEEEEEEEEETTS-EEEEEEEEE CS
  CPSase_L_D2  19 ssaapvetleealaiakeigyPviika.afglGGkGmrvarneeelaelvkkalaeakaafgnkqvlvekslkgpkeiEvevlrDakgnvitvceren 115
                    +a   ++  + ++ +++gyP ++k+ + +  G+G  v+r+ +++ + +k        a+g++ ++vek++    ei v v+r  +g v    + e 
   EPX70999.1 121 FCDA--PDQAAVENAGQKFGYPFVLKSkTLAYDGRGNYVVRQPQDIPDGIK--------ALGDRPLYVEKFVPFSMEIAVMVVRTLDGKVYAYPTTE- 207
                  4444..445555667799********846799***************9986........367888*******************9999887777776. PP

                  CCECTCCCCEEEES-SS--HHHHHHHHHHHHHHHHHHT-EEEEEEEEEEETTTTEEEEEEEESS CS
  CPSase_L_D2 116 slqlrtqkvievAPsqtLtdeerqalreaavkvvrevgvvgagtveflldpkskeyyviEvNtR 179
                   +q+ +   ++ AP++ L ++  ++ ++ a+ +vr+ +  g   ve  + ++ ++  + E+ +R
   EPX70999.1 208 TIQRDNICHLVYAPAR-LPHHLQKRAQTLAMDAVRTFKGAGIYGVEMFVLQDGESVLLNEIAPR 270
                  56888888999***97.45555555555555555555555555566555555666666677666 PP

>> Dala_Dala_lig_C  D-ala D-ala ligase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0     4e-07     0.001      96     176 ..     186     271 ..     125     275 .. 0.86

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 4e-07
                      CEEEEEEEEE-SSSSS-HHHHH.C..TT-.E.EESS----HHHHHHHHHHHHHHHHHTT--SEEEEEEEEETTTE.EEEEEEESS- CS
  Dala_Dala_lig_C  96 levsevgeivvkkgfydyeaky.sd.dka.q.levpaklekeveekiqelalkaykaldlrGlaRvDfflteege.ivlnEvNtlP 176
                      +e+++++ +++++++y y +   ++ d++ + +  pa+l+++ +++ q+la++a ++ +++G+  v +f+ ++ge ++lnE+ + P
       EPX70999.1 186 MEIAVMVVRTLDGKVYAYPTTEtIQrDNIcHlVYAPARLPHHLQKRAQTLAMDAVRTFKGAGIYGVEMFVLQDGEsVLLNEIAPRP 271
                      566677777889999999876654434431414569**********************************7777627789998777 PP

>> PrpR_N  Propionate catabolism activator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   7.9e-05       0.2      11      58 ..     427     478 ..     418     519 .. 0.69

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 7.9e-05
      PrpR_N  11 egdleeavelakeleaegvdviiSrGgtae....llrkhvsvPVveikvsgy 58 
                 + + e+ v++a++++++g +vii++ g a+    ++ + +++PV+ ++v+g 
  EPX70999.1 427 HRTPERMVSYARTAASRGLRVIIAGAGGAAhlpgMVAAMTPLPVIGVPVKGS 478
                 4577999*****************98888723334567789******99874 PP

>> AlaDh_PNT_C  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   5.7e-05      0.14      31      98 ..       7      73 ..       3      82 .. 0.92
   2 ?   -3.8   0.1       2.5   6.3e+03     114     126 ..     401     413 ..     398     413 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 5.7e-05
                 EEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTCECEEHCHHHHHHHHHHHH-SEEEE- CS
  AlaDh_PNT_C 31 vlviGgGvaGlqAiatakglgakVtvlDvrparleqleslgakfvevlksqeellaeavkeadvvigt 98
                 v ++GgG  G   +++a++l+ + +v+D     ++q++  + + +++  ++e+++ae +k++ vv + 
   EPX70999.1  7 VGILGGGQLGRMMLEAAHRLNVRCVVVDAPNCPAKQIDGGHDH-IDASFRDENAIAELAKKSTVVTTE 73
                 679***********************************99888.*****************9999775 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 2.5
                  HHHTS-TTEEEEE CS
  AlaDh_PNT_C 114 mvksMkpgsVivD 126
                   +++Mk+ +Vi D
   EPX70999.1 401 DLSKMKDAAVILD 413
                  6899*******98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (556 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       396  (0.0220871); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.41
# Mc/sec: 4083.90
//
Query:       EPX71000.1  [L=228]
Description: hypothetical protein SOCG_01221 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       621  (0.0346366); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1621.81
//
Query:       EPX71001.1  [L=920]
Description: aconitate hydratase/ribosomal protein subunit L49 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   5.4e-143  477.3   0.0   7.5e-143  476.9   0.0    1.2  1  Aconitase       Aconitase family (aconitate hydratase)
    9.7e-39  132.7   0.0      2e-38  131.7   0.0    1.6  1  Aconitase_C     Aconitase C-terminal domain
      3e-18   65.9   0.3    6.4e-18   64.9   0.3    1.6  1  Ribosomal_L21p  Ribosomal prokaryotic L21 protein
     0.0019   17.0   0.0     0.0039   16.0   0.0    1.4  1  DUF521          Protein of unknown function (DUF521)


Domain annotation for each model (and alignments):
>> Aconitase  Aconitase family (aconitate hydratase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  476.9   0.0  1.7e-146  7.5e-143       1     457 [.      70     511 ..      70     515 .. 0.92

  Alignments for each domain:
  == domain 1  score: 476.9 bits;  conditional E-value: 1.7e-146
   Aconitase   1 ekiwdahlv..ee..........egiayv...pdrvllqdvtgvqalvdlaaareavrrlggtlatidhlvpvdlvidhsvgaeealeknledefernk 84 
                 ek+++ahl+  ee          +g +y+   pdrv++qd+++++al ++++++ +            +l+p+++++dh++  ++++++++ d++++nk
  EPX71001.1  70 EKVLYAHLTnpEEslsgvsasqiRGSLYLklnPDRVAMQDASAQMALLQFMTCGLDR-----------TLIPSSIHCDHLIVGHRGANSDIPDSIANNK 157
                 68888888865225555555555556777889*************************...........9****************************** PP

   Aconitase  85 eryefLksaakafgirvvppgqGIvHqvnlEyglalpgktvvgtDSHTtmigglGvlaiGvGgieaeavllgqplelkipkvvgvkltGklkegvtakD 183
                 e ++fL+saak++gi+++ pg+GI+Hq++lE+ +a pg +++gtDSHT+++ggl+ + + vG ++a+++++++p+elk+pkv+gv+l+G ++ ++t+kD
  EPX71001.1 158 EIFDFLQSAAKKYGIQFWGPGSGIIHQIVLEN-YAAPGGMMLGTDSHTPNAGGLCLFIVSVG-ADAVDAMTNTPWELKAPKVIGVHLKGAMSGWATPKD 254
                 ********************************.**********************9999986.8*********************************** PP

   Aconitase 184 lvlavigklrkkgvvgkvvEffGegvesLsledraTiaNMaaEvGAttglfpvdektleYLkatgreeaavlveaydkaqalfelaadedaeydkvlel 282
                 l+l+++g+l+++g++g+++E+fG+gvesLs++++aT++NM+aEvGAtt+lfp++e++ +YL+at+r+e+a + ++++++ +   laad++a+yd+++e+
  EPX71001.1 255 LILHLAGRLTVRGGTGHIIEYFGPGVESLSCTGMATVCNMGAEVGATTSLFPYTESMKRYLEATHRAEVANAAANVHQQHN--YLAADAGAKYDEIVEV 351
                 ******************************************************************999953444444444..689************* PP

   Aconitase 283 dlstlepsvagpkrPqdavplselvkkefkeelekeaaekaleyklkegtklkdgkvdiaaigSCTNssnedvraaagllakavekglkvkpgvktsva 381
                 +ls+l+ps +gp++P+ ++pl+++      +++            ++++++ k   v++++igSCTNss++d++ + +++++a+++gl  kp+v+++v+
  EPX71001.1 352 NLSELTPSFNGPFTPDLNTPLEKFS-----KAI------------ETNNWPKK---VSAGLIGSCTNSSYQDMSSVVDVVEQATKAGL--KPQVPFLVT 428
                 *********************5555.....445............56899999...*******************************5..5677***** PP

   Aconitase 382 PGSevvkayleaeGlleiLekaGfevvgagCstCignsdrle.....egeaivsssNRNFegRq..gpntrayLaSPelvvaa 457
                 PGSe+++a++e++G+++ Le+aG+ v++++C++Cig ++r +     e +ai++s+NRNF+ R+  +p+t+++L+SP +v+a 
  EPX71001.1 429 PGSEQIRATIERDGITKRLEDAGAVVLANACGPCIGMWKRDDtvsteEPNAILTSFNRNFRSRNdgNPSTMNFLTSPVIVAAK 511
                 ************************************99996566655666**************75688999*********96 PP

>> Aconitase_C  Aconitase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.7   0.0   4.5e-42     2e-38       3     130 ..     598     723 ..     596     724 .. 0.97

  Alignments for each domain:
  == domain 1  score: 131.7 bits;  conditional E-value: 4.5e-42
                  CCCCCTT--CHHHHSTGGGCCGHCCHHHCCCGGTTTCCCCTTTSBBSEEEETTTTEEEEHHHHHHHHHHTT--EEEE--SSBTBS---THHHHHHHHT CS
  Aconitase_C   3 kllklkGlttedeksnvdtdlkipkqfegtianiglgnelveekrankttdlddgekedvvdaaerykkegaklvviagknfGeGSSRehAAkalrll 100
                  + +k+kG++t+d++s+++ +lk++++++++ +n+ +g+ ++ + ++n ++d   ge +++++ + r++++g++++v+a++n+GeGS+RehAA+++r+l
   EPX71001.1 598 VAIKVKGKCTTDHISAAGKWLKYKGHLSNICNNTLIGAVNAATGEVNVAYDN--GESMSIPELMWRWNSKGQPWLVVAEHNYGEGSAREHAALQPRAL 693
                  56899*******************************************9996..89****************************************** PP

                  TEEEEEES-B-HHHHHHHHHTT-EEEEEST CS
  Aconitase_C 101 GikaviaeSFerIfennliknglLplefke 130
                   +++++++SF+rI+e+nl+k+g+Lpl+f++
   EPX71001.1 694 NGRIILTKSFARIHETNLKKQGILPLTFAN 723
                  ****************************97 PP

>> Ribosomal_L21p  Ribosomal prokaryotic L21 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.9   0.3   1.4e-21   6.4e-18       2     100 ..     814     916 ..     813     917 .. 0.93

  Alignments for each domain:
  == domain 1  score: 64.9 bits;  conditional E-value: 1.4e-21
                     EEEEECSTEEEEESSSEEEEEESS..SSSTTCEEEESSEEE....EE.ECTSSSES..STCEEEEEEEEEE---EEEEEEETTTTEEEEEEE--E CS
  Ribosomal_L21p   2 yAiietgGkqykVeegdvlkvekl..eaevgdkveldkVllvgskddvkvGaplve..gakVeaevvehgkgkkiivfkkkrrknyrrkqghRqk 92 
                     yA +++ ++++ V+egd l ++      +vgd++++dkV  +gs+d ++vG+p+++  + ++ea+v++  k+   + +k+krr+++ r ++h+q 
      EPX71001.1 814 YATVSLYNQHFIVTEGDQLSLPFQakGLQVGDTIRFDKVTRLGSRDYTIVGKPYIDisNHTIEATVLALPKSALSVRVKHKRRHRHDRVMKHKQT 908
                     9*********************5545578**************************633689********************************** PP

                     EEEEEEEE CS
  Ribosomal_L21p  93 ytklrItk 100
                     yt lrI+k
      EPX71001.1 909 YTILRINK 916
                     ******97 PP

>> DUF521  Protein of unknown function (DUF521)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   8.6e-07    0.0039     289     358 ..     386     460 ..     368     476 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 8.6e-07
      DUF521 289 ekvdlvalG.cPhlsleElrelaell...kgkkkkvkvelwvttsre.vkeeaerlglveklekaGvkvlsdtCm 358
                 +kv + ++G c   s++++ ++++++   ++ + k++v+++vt + e +++++er g++++le+aG+ vl++ C 
  EPX71001.1 386 KKVSAGLIGsCTNSSYQDMSSVVDVVeqaTKAGLKPQVPFLVTPGSEqIRATIERDGITKRLEDAGAVVLANACG 460
                 556666665466778888888888885546778899*******865449*************************4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (920 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       369  (0.0205812); expected 358.6 (0.02)
Passed bias filter:                      348  (0.0194099); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.62u 0.30s 00:00:00.92 Elapsed: 00:00:00.43
# Mc/sec: 6471.28
//
Query:       EPX71002.1  [L=294]
Description: phosphatase activator [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (294 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       340  (0.0189637); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 2031.67
//
Query:       EPX71003.1  [L=331]
Description: carboxyl methyl esterase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.9e-18   67.9   0.0    2.3e-18   67.6   0.0    1.1  1  Abhydrolase_6  Alpha/beta hydrolase family
      2e-09   37.5   0.1    5.7e-09   36.0   0.1    1.6  1  Abhydrolase_1  alpha/beta hydrolase fold
    5.3e-08   32.4   0.0    7.1e-08   32.0   0.0    1.2  1  Hydrolase_4    Serine aminopeptidase, S33
     0.0014   18.4   0.0     0.0021   17.8   0.0    1.4  1  PGAP1          PGAP1-like protein
     0.0015   18.1   0.0     0.0024   17.4   0.0    1.3  1  DUF2974        Protein of unknown function (DUF2974)
     0.0037   16.6   0.0       0.21   10.9   0.0    2.2  2  DUF915         Alpha/beta hydrolase of unknown function (DUF9
     0.0092   15.5   0.0      0.015   14.8   0.0    1.4  1  DUF676         Putative serine esterase (DUF676)
  ------ inclusion threshold ------
      0.027   14.3   0.1       0.15   11.9   0.0    2.3  2  Ser_hydrolase  Serine hydrolase
      0.057   13.2   0.0      0.092   12.5   0.0    1.3  1  Abhydrolase_5  Alpha/beta hydrolase family
       0.13   12.1   0.0       0.26   11.2   0.0    1.5  1  Lipase_3       Lipase (class 3)
       0.14   11.6   0.0       0.43   10.0   0.0    1.7  2  Peptidase_S9   Prolyl oligopeptidase family


Domain annotation for each model (and alignments):
>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.6   0.0   1.4e-21   2.3e-18       3     218 ..      68     312 ..      66     314 .. 0.68

  Alignments for each domain:
  == domain 1  score: 67.6 bits;  conditional E-value: 1.4e-21
                    EE..--GC.....GCHHHH.....HHHHCCT.CEEEEE--TTSTS-GGCS.--HHHCHHH....HHHHCCTT.....TTSEEEEEETCHHHHHHHH CS
  Abhydrolase_6   3 ll..HGagssassWlvapL.....aallaag.vhvlapDlpGhGrsdppp.ldledladl....aalldelaa...gggpvvlvGHSlGGalalaa 82 
                    ++  HGagssa s++  p+      +  ++g +  l++Dl+ hG+++  p +d + l++l    +++++ + +      + +lvGHSlGG++ ++ 
     EPX71003.1  68 FVlqHGAGSSAMSFA--PMipellSNSDNSGgF--LSLDLRAHGETSVQPeTDMS-LQTLtndfVHAVQYVQNmfhLEEKLILVGHSLGGSICTE- 157
                    4456**********6..4432113444444479..*********44333322222.2333311133333333355577889**************. PP

                    HHCC........EE.EEES-..----TTT..S----TTHHHHHHTT-C....CCCHCCH...........S-HSCCCCHHH.CCCCHCHCCCGHHH CS
  Abhydrolase_6  83 apla......lvvg.vlldppptalpagl..laaalelllallallrl....lawlsre...........plprlfladed.adaawrarlarlaa 153
                      +        v+g v++d+   + + +   ++  ++++ ++++++ +      w+ +             +p l+++ ed   + wr+ la  ++
     EPX71003.1 158 --AVfqkrlpNVSGlVIIDA---IEGSAIesFNYMRRYISTRPSSFSSieeaISWHLKTltirqhssaciTVPSLLIPSEDsSCYKWRTDLASTSP 248
                    ..5555666544559*****...555555555555555555555444455557888433444567666764444777766645899********** PP

                    HCCHHCHTTCCHHTT-TTGCEEE.CTT-CHHHHCHHCCCHSTTEEETCE...SSS-HHHHSHHHHH CS
  Abhydrolase_6 154 llaglgllpaaawadlpvpllvl.ggeDplvprllerllaqagarlpvvlpgaGHlphleepdeva 218
                    +++ +++   + + +  +  l++ +++D+l + l+   ++  +++l +v p +GH++h+++p + a
     EPX71003.1 249 FWSDWFTGLSDKFLTSACGKLLIvAAADRLDKSLIIGQMQ-GKYQL-EVSPASGHFVHEDAPVQMA 312
                    ******9999999999999955559*******99998898.*****.************9998887 PP

>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.0   0.1   3.5e-12   5.7e-09       3     256 ..      68     307 ..      67     308 .. 0.84

  Alignments for each domain:
  == domain 1  score: 36.0 bits;  conditional E-value: 3.5e-12
                    EEEE-STTTCGGGGTTGHHHHHHHHT...TSEEEEEEETTSTTSSSTTTGB.CHHSHHHHHHHHH....HHHHHCTTSSEE.EEEETHHHHHHHHH CS
  Abhydrolase_1   3 lvilhGlpgssdvwaerglapaLakd...gfdvillDlrGvgySspapacinddygtasvaddld....rildalgddklt.lvGhSmGGmialay 90 
                    +v+ hG + s+ ++a   ++p L  +      ++ lDlr +g++s  p+   +d+++ ++ +d+     ++++ + +++   lvGhS+GG i++++
     EPX71003.1  68 FVLQHGAGSSAMSFAP--MIPELLSNsdnSGGFLSLDLRAHGETSVQPE---TDMSLQTLTNDFVhavqYVQNMFHLEEKLiLVGHSLGGSICTEA 158
                    7999**9999999***..999999999**9999****************...556444444444433337788888776665*************9 PP

                    HHHH..GGGEEEEEEESECSSCCHHHHHHHHHHHHHHCHHCHHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHCHHHCCHHHHHHHCHHHHHH CS
  Abhydrolase_1  91 aaey..perVkalvllgaidpaaslieaqrqqaksfpdffdgyaadcarnpagplladelaaleqrhrlvdalkfpdkskrfpssgsdnasslatg 184
                      +   p+ V++lv ++a      ++  +  + + + ++  +    +    ++ ++  +  +++q+++++     p+     + s+ +   ++ + 
     EPX71003.1 159 VFQKrlPN-VSGLVIIDA------IEGSAIESFNYMRRYISTRPSSFSSIEEAISWHLKTLTIRQHSSACITV--PSLLIPSEDSSCYKWRTDLAS 245
                    99988555.*********......6666777777778888888889999999999999999999999999999..999999999999999999999 PP

                    HHHHHHHHHHCCHHHHHHHHHCTHHHHSEEEEEEETTCSSSCHHHHHHHHHCHTSEEEEEEETCSSSHHHHS CS
  Abhydrolase_1 185 alksieqwpttdsaklllrlrelknvlaptlvisgtsDplvppkaledlaqllpkkrlvvisdagHlafleg 256
                     + +++ w t +s+k+l +  +      + l++ ++ D+l++   + +++++    +l+v + +gH+++ + 
     EPX71003.1 246 TSPFWSDWFTGLSDKFLTSACG------KLLIV-AAADRLDKSLIIGQMQGK---YQLEVSPASGHFVHEDA 307
                    999999***********99888......77777.669999999999999988...89999999999999886 PP

>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.0   0.0   4.3e-11   7.1e-08       7     107 ..      68     173 ..      62     218 .. 0.87

  Alignments for each domain:
  == domain 1  score: 32.0 bits;  conditional E-value: 4.3e-11
  Hydrolase_4   7 vvlvHGlaehsgryaelaeaL...aaqGfavyalDhrGhGrsegkrghvpsfddyvdDlaafvekvkee.hpelplfllGhSmGGliallyl.lrypd 99 
                   vl HG ++++  +a ++ +L    ++   ++ lD r hG++  +     s++++++D+  +v+ v++  h e++l+l+GhS+GG i ++++ +++ +
   EPX71003.1  68 FVLQHGAGSSAMSFAPMIPELlsnSDNSGGFLSLDLRAHGETSVQPETDMSLQTLTNDFVHAVQYVQNMfHLEEKLILVGHSLGGSICTEAVfQKRLP 165
                  5889************999993333456789************9999999*****************6615566******************988888 PP

  Hydrolase_4 100 kvaglils 107
                  +v+gl+++
   EPX71003.1 166 NVSGLVII 173
                  8***9985 PP

>> PGAP1  PGAP1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   1.3e-06    0.0021      71     114 ..     125     164 ..      90     207 .. 0.85

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 1.3e-06
       PGAP1  71 ylndaIkyIlslysssekeptsviliGHSmGGivaraaltlkny 114
                    +a++y+++++    + ++++il+GHS+GG +   a++ k++
  EPX71003.1 125 DFVHAVQYVQNMF----HLEEKLILVGHSLGGSICTEAVFQKRL 164
                 4467899999999....999***************999998874 PP

>> DUF2974  Protein of unknown function (DUF2974)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   1.5e-06    0.0024      58     104 ..     116     161 ..     112     180 .. 0.83

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 1.5e-06
     DUF2974  58 nmafrsevpaqesAlkYlnkileesegkiylgGhSkGGnlAvyaamn 104
                  m+ +  ++   +A++Y++++++  e k++l+GhS GG++ + a+ +
  EPX71003.1 116 DMSLQTLTNDFVHAVQYVQNMFHLEE-KLILVGHSLGGSICTEAVFQ 161
                 6777778888889********76555.5***********99888766 PP

>> DUF915  Alpha/beta hydrolase of unknown function (DUF915)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.018        29      15      58 ..      69     112 ..      64     119 .. 0.87
   2 !   10.9   0.0   0.00013      0.21      79     140 ..     116     174 ..     110     177 .. 0.77

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.018
      DUF915  15 ifihGyggtaeslnemvkqlenkegkkkkvltvdvskdgevsvk 58 
                 ++ hG g++a s+  m+ +l ++ +++   l++d  + ge sv+
  EPX71003.1  69 VLQHGAGSSAMSFAPMIPELLSNSDNSGGFLSLDLRAHGETSVQ 112
                 566**********************9999999999998887776 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00013
      DUF915  79 daslkkqakwlkkvlseLkkkYnik.kfnavGhSmGglaltsYleeyaddkslPqlkklvtig 140
                 d sl++ ++ + +++++ ++ ++++ k+ +vGhS Gg+ +t        +k lP++  lv i+
  EPX71003.1 116 DMSLQTLTNDFVHAVQYVQNMFHLEeKLILVGHSLGGSICTE----AVFQKRLPNVSGLVIID 174
                 5567777788889***********64799********99873....33445588888888776 PP

>> DUF676  Putative serine esterase (DUF676)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   9.5e-06     0.015       7      99 ..      67     161 ..      62     187 .. 0.67

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 9.5e-06
      DUF676   7 LvVlvHGlqgnsaDlelikeqlekikeklpee...kieflmsennesktfkgidvlgerlaeevlevvkkkkdknkkiSfvghSlGgliaraaiak 99 
                 L+Vl HG  ++   ++ +  +l   ++++       +   +++  + +t   +++l++  ++ v ++v++  + ++k+ +vghSlGg i + a+ +
  EPX71003.1  67 LFVLQHGAGSSAMSFAPMIPELLSNSDNSGGFlslDLRAHGETSVQPETDMSLQTLTNDFVHAV-QYVQNMFHLEEKLILVGHSLGGSICTEAVFQ 161
                 6777777777777777666666663333222242244445555566666666667777777665.56666666679*****************973 PP

>> Ser_hydrolase  Serine hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   9.2e-05      0.15      36      93 ..     120     179 ..     103     238 .. 0.77
   2 ?   -1.9   0.0       1.7   2.7e+03      35      61 ..     246     273 ..     230     275 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 9.2e-05
                    S--HHHHHHHHH..HHHHC-STTEEEEEETCHHHHHHHHHHHTTSSSEEEEEEET--SGG CS
  Ser_hydrolase  36 kPdledWvaale..aaveaaeekvvlvAHSlgclavlhaaelqlakkvagalLVapadve 93 
                    +   +d v+a++  +++ ++eek++lv HSlg  ++ +a+ +++  +v g +++   + +
     EPX71003.1 120 QTLTNDFVHAVQyvQNMFHLEEKLILVGHSLGGSICTEAVFQKRLPNVSGLVIIDAIEGS 179
                    55667777777622455678999***********99999988888999998887766654 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.7
                    TS--HHHHHHHHHHH.HHC-STTEEEEE CS
  Ser_hydrolase  35 lkPdledWvaaleaa.veaaeekvvlvA 61 
                    ++P  +dW   l+ + ++ a +k+++vA
     EPX71003.1 246 TSPFWSDWFTGLSDKfLTSACGKLLIVA 273
                    6788899999998762566667777776 PP

>> Abhydrolase_5  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   5.6e-05     0.092      27      87 ..     108     173 ..      93     186 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 5.6e-05
  Abhydrolase_5  27 yevvlvklPlnlavlgknkaeeii...keapklekfvvgGhslGGvvasrfaaeee..kiegvvfl 87 
                     + v  ++ + l  l+++ ++ +    +     ek+++ GhslGG + ++ ++++   ++ g+v +
     EPX71003.1 108 ETSVQPETDMSLQTLTNDFVHAVQyvqNMFHLEEKLILVGHSLGGSICTEAVFQKRlpNVSGLVII 173
                    555555666666666666544443000333334799************999998854588888876 PP

>> Lipase_3  Lipase (class 3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00016      0.26      54      79 ..     129     155 ..      89     161 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00016
                 HHHHHHHHTT.-EEEEEEEETHHHHHH CS
    Lipase_3  54 elkrllekyp.eysivvtGHSLGgalA 79 
                  ++ + + +  e +++++GHSLGg++ 
  EPX71003.1 129 AVQYVQNMFHlEEKLILVGHSLGGSIC 155
                 45444444334779**********985 PP

>> Peptidase_S9  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   0.00026      0.43      45      83 ..     123     160 ..     115     165 .. 0.81
   2 ?   -2.0   0.0       1.2     2e+03     173     191 ..     288     306 ..     273     321 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00026
                   HHHHHHHHHHHHHTTS--GGGEEEEEETHHHHHHHHHHH CS
  Peptidase_S9  45 fdDfiaaaealakegyvdserlaitGgSyGGyltgaaln 83 
                    +Df+ a++++ +  +  +e+l++ G+S GG     a+ 
    EPX71003.1 123 TNDFVHAVQYVQNM-FHLEEKLILVGHSLGGSICTEAVF 160
                   68********9544.6669************88776665 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 1.2
                   S-SEEEEEETTS-SSTTSS CS
  Peptidase_S9 173 gknvlllifpdegHgvgkp 191
                   + +++l + p +gH v ++
    EPX71003.1 288 QGKYQLEVSPASGHFVHED 306
                   55699999******87643 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       431  (0.0240393); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 2430.94
//
Query:       EPX71004.1  [L=312]
Description: hypothetical protein SOCG_01225 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (312 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       597  (0.033298); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 2359.79
//
Query:       EPX71005.1  [L=395]
Description: calreticulin/calnexin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.4e-17   62.4   0.0    5.7e-17   61.6   0.0    1.3  1  Calreticulin  Calreticulin family


Domain annotation for each model (and alignments):
>> Calreticulin  Calreticulin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.6   0.0   3.2e-21   5.7e-17       1     195 [.      40     224 ..      40     235 .. 0.84

  Alignments for each domain:
  == domain 1  score: 61.6 bits;  conditional E-value: 3.2e-21
  Calreticulin   1 fveqFeee..eelekrwikskakkedeeakYkgkwsveepkklkglegdkgLvlkskakhhaisaklekpikl..kkkdLvvqYevklqeglecgga 93 
                   f+eqF+e+  e++++rw   +++         g++++ e+  ++ l++++gL+++   k+h + + ++ pi+   ++ ++ + +++k   +++cg a
    EPX71005.1  40 FTEQFTEKdlESWSHRWFLPSDS---A----IGSFKLVEAP-NRLLANEYGLITTAPGKRHVVFSDIDVPITResSSIPITLSFQIKPTAHWDCGHA 128
                   78999988778999999887772...2....3555555543.3369**************************9544568899*************** PP

  Calreticulin  94 yikLlseeeekdleefsdktpytimFGpdkcgstnkvhfilrkknpktgeieekhlkkpp.klkkdklthLytLilkpdntfeiridgkvvksgnll 189
                    ikLls++++  ++e ++ t   i FG  kcg  +   f + + +++       hlk+pp +  +d +t++ytLilk+d +f+ir +++v+ +gn+ 
    EPX71005.1 129 NIKLLSQKDS--TNEDNEATFPLIEFGVKKCGLYDYAYFSFGSYENQ----FVYHLKNPPrSGLTDYVTNMYTLILKND-KFTIRRNKQVLAHGNVQ 218
                   *******986..56778899999******************988764....5789999995667899*********866.7**************** PP

  Calreticulin 190 edfepp 195
                   + f+ +
    EPX71005.1 219 DAFSKS 224
                   999764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (395 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 2728.12
//
Query:       EPX71006.1  [L=304]
Description: m7G(5')pppN diphosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-29  103.0   2.0      2e-29  102.4   1.1    1.7  2  DcpS      Scavenger mRNA decapping enzyme (DcpS) N-terminal
    5.1e-28   97.8   1.8      1e-27   96.9   1.8    1.5  1  DcpS_C    Scavenger mRNA decapping enzyme C-term binding


Domain annotation for each model (and alignments):
>> DcpS  Scavenger mRNA decapping enzyme (DcpS) N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.4   1.1   2.3e-33     2e-29       2     104 .]      12     112 ..      11     112 .. 0.97
   2 ?   -2.3   0.0      0.94   8.4e+03      80      96 ..     225     241 ..     178     244 .. 0.62

  Alignments for each domain:
  == domain 1  score: 102.4 bits;  conditional E-value: 2.3e-33
        DcpS   2 llkkFklervLnedqatkrisllGtidsepAililektafeteeaaklaslkesleelknlgandiYtwllavlkqkeeelpdlkinliyPatekhikK 100
                 ll+kF++e+vL+ed+++k ++l+G i+++ A+++lektaf+ +   +l+++++ ++e++ +++nd+++w+l ++  ++++lp+lk +li+Pa e+hi+K
  EPX71006.1  12 LLQKFQYEKVLKEDTKSKIVTLYGYIENKVALVLLEKTAFDLHC-INLQEIPKYIQETRLVQNNDVFHWYLNTFL-QSNDLPSLKTTLIWPAAENHIRK 108
                 799****************************************9.599************************988.689******************** PP

        DcpS 101 YskQ 104
                 Ys+Q
  EPX71006.1 109 YSAQ 112
                 **98 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.94
        DcpS  80 eelpdlkinliyPatek 96 
                  ++++lk+ + yP +  
  EPX71006.1 225 VHKNQLKLFVHYPPSYY 241
                 34556666666666555 PP

>> DcpS_C  Scavenger mRNA decapping enzyme C-term binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.9   1.8   1.1e-31     1e-27       1     107 [.     141     255 ..     141     261 .. 0.96

  Alignments for each domain:
  == domain 1  score: 96.9 bits;  conditional E-value: 1.1e-31
                 T-HHHHHHTTSS-B-EEEE-....SSEEEEE-SS.-S...SSEEEEEEESS.---SGGG--TTTTTHHHHHHHHHHHHHHHTT-T-EEEEE--SCCCT- CS
      DcpS_C   1 kwvfnilakgkepervvyed....ekfvvlkDik.pk...aklhllvipkr.dikslrdLtkehlpllkemrekakkvieekynevdaeelrvgvhyqP 90 
                 kwv nil + +e+er+v+ed    ++f+vl+D+k ++   ++l l++i++r d++s+rdLt ehl+ll+++r  + + +++k+  v++++l+++vhy+P
  EPX71006.1 141 KWVKNILDHVAEAERIVLEDcdkkTGFLVLPDLKwDRqtmSSLNLMAIVHRdDLASIRDLTLEHLDLLENVRSRVLNDVPKKF-PVHKNQLKLFVHYPP 238
                 7**********************************88899*******************************************.68************* PP

                 -S-S--EEEEE...... CS
      DcpS_C  91 svyhlHlHvisldfesp 107
                 s+yhlH+H++++d+e+ 
  EPX71006.1 239 SYYHLHVHIMHVDHETG 255
                 **************984 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       539  (0.030063); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 2159.99
//
Query:       EPX71007.1  [L=214]
Description: GINS complex subunit Sld5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.6e-11   42.7   0.0    8.1e-11   41.9   0.0    1.4  1  SLD5_C    DNA replication complex GINS protein SLD5 C-terminu
    8.9e-05   22.9   0.2    0.00027   21.4   0.2    1.9  1  Sld5      GINS complex protein


Domain annotation for each model (and alignments):
>> SLD5_C  DNA replication complex GINS protein SLD5 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.9   0.0   9.1e-15   8.1e-11       1      56 []     161     214 .]     161     214 .] 0.95

  Alignments for each domain:
  == domain 1  score: 41.9 bits;  conditional E-value: 9.1e-15
      SLD5_C   1 PdldkfVFvrvgkdvgtvtieelgedgdvelekGdiyvvRYsvvkdlvesGkveLI 56 
                 Pd+d+ VF+ v++ +++     ++e   v+l +Gdi +++Ys++ ++v+ G+v LI
  EPX71007.1 161 PDMDSPVFCMVNETIEENLRVAENEY--VTLDRGDILLLKYSAIANYVRAGAVSLI 214
                 9**************88888888999..***************************9 PP

>> Sld5  GINS complex protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.2     3e-08   0.00027      50     108 ..      69     118 ..       4     119 .. 0.76

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 3e-08
                 HHHHHHHHHHHHT.HCHHHHHHHHHHHHHHHHHHHTHCHHHHHHHTS-TCCHCCS-HHH CS
        Sld5  50 flelavkllelardldelkrllrdllevRlakirkfaenledaagggggellsglseeE 108
                  ++  + ++el+r    +k++lr++l++Rl+ki+++ ++++++      + l +ls  E
  EPX71007.1  69 GYRSVLIQIELER----IKFVLRSYLRTRLSKIDDYGQYIQANP-----SVLLNLSSTE 118
                 4445555667777....7*********************99999.....6666888777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       463  (0.0258241); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1618.95
//
Query:       EPX71008.1  [L=216]
Description: RNase P and RNase MRP subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.4e-21   74.3   0.0    8.7e-21   73.6   0.0    1.3  1  UPF0086   Domain of unknown function UPF0086


Domain annotation for each model (and alignments):
>> UPF0086  Domain of unknown function UPF0086
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.6   0.0   4.8e-25   8.7e-21       2      84 .]     121     206 ..     120     206 .. 0.97

  Alignments for each domain:
  == domain 1  score: 73.6 bits;  conditional E-value: 4.8e-25
                 HHCCSXXSS-EEEEEECSSTTTTTEEEEEEEEETTEEEEEECTTEEEEEESTTCEEEEEE....TTEEEEEECCCCSSXHHHHHCH CS
     UPF0086   2 kLlkadlhGaeveVvrsknpslvgikGiVvkEtkntlkivtkksrvktvpKegsvFefev...kdvlevevdGsqlryrpadRaer 84 
                 k++ka++hG  ++V+r+k+ps++gi+Gi+v+E+kn+l++vt+++ v ++pK +s++++     +++l +e++ ++l+ r+ dR++r
  EPX71008.1 121 KMIKAEYHGSYMRVIRCKSPSRIGIEGICVHESKNMLSLVTRNDTVVRIPKTDSIMQVIAnmsNRRLVIELYAHHLLLRAGDRSNR 206
                 89********************************************************9999977899***************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       440  (0.0245412); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1756.21
//
Query:       EPX71009.1  [L=715]
Description: RSC complex subunit Rsc9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.024   13.2   1.5      0.036   12.6   1.5    1.2  1  Proteasom_PSMB   Proteasome non-ATPase 26S subunit
        0.1   13.2   0.0       0.67   10.6   0.0    2.2  2  RFX_DNA_binding  RFX DNA-binding domain


Domain annotation for each model (and alignments):
>> Proteasom_PSMB  Proteasome non-ATPase 26S subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   1.5     4e-06     0.036      40     134 ..     269     366 ..     227     413 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 4e-06
  Proteasom_PSMB  40 esile.leelfdclntd.kreqvtlcvellklilkalavdelaedlkvvlleglshanpnvkalvLaeleRiveekegalellk..neellllii 130
                     e i+  le++  c+nt  + e  ++c+++ + i ++l++++ +  l  +l  +l++++++v++ +L+ l+R   +      ll+   e++++ ii
      EPX71009.1 269 ELIVGvLESAIRCANTFeNVELLHYCLDISETISSHLSIQDEKIGLYLLLCSFLNSSDNAVLIGTLRTLARLALNDR-NNRLLQdlDEKVVIRII 362
                     33444677888899964378999************************************************654433.23444311355555555 PP

  Proteasom_PSMB 131 kalr 134
                        +
      EPX71009.1 363 SLTE 366
                     5443 PP

>> RFX_DNA_binding  RFX DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.26   2.3e+03      41      70 ..      87     117 ..      73     118 .. 0.81
   2 ?   10.6   0.0   7.4e-05      0.67       5      59 ..     463     520 ..     460     541 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.26
  RFX_DNA_binding  41 lna.asFgKlirsvFpnvktrRLgtrgqskY 70 
                      ln+  +F+K +r   p +  rR +   +s+Y
       EPX71009.1  87 LNKlQNFYKSVRPPSPVTLERRAEEALNSSY 117
                      554257******9999999999999999988 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 7.4e-05
  RFX_DNA_binding   5 lqwlnanfeeaedvsvprqevYaeYlsicsklkl...kplnaasFgKlirsvFpnvkt 59 
                      ++w++  fe ++d +v ++++++ Y+s +++++      +++a+F K+  + F n ++
       EPX71009.1 463 VKWMSCCFEASPDDYVLQTDIWQMYCSDMERAQGpglMAISPADFIKVSSHAFYNARA 520
                      79************************99999875322559********9999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (715 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       378  (0.0210832); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 5143.52
//
Query:       EPX71010.1  [L=670]
Description: hypothetical protein SOCG_01231 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-05   24.7   0.2    0.00024   21.0   0.1    3.1  4  Arm       Armadillo/beta-catenin-like repeat
     0.0044   17.5   0.0       0.05   14.1   0.1    3.0  3  HEAT_EZ   HEAT-like repeat


Domain annotation for each model (and alignments):
>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.1   2.7e-08   0.00024       1      40 [.      66     105 ..      66     106 .. 0.96
   2 ?   -1.8   0.0      0.42   3.8e+03      16      39 ..     238     265 ..     236     265 .. 0.83
   3 ?   -2.7   0.1      0.82   7.3e+03      15      31 ..     347     363 ..     343     363 .. 0.77
   4 ?   -3.1   0.0         1   9.4e+03       1      17 [.     408     423 ..     408     425 .. 0.85

  Alignments for each domain:
  == domain 1  score: 21.0 bits;  conditional E-value: 2.7e-08
                 SHHHHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm   1 nsenkdavieaGavppLvrLLssedeevqeeAawALsNLa 40 
                 +se + ++ + G v  L++ L++++ ev+ e+++AL+NL 
  EPX71010.1  66 SSEGRLQLLKNGLVSKLMNRLTDDSIEVVVEVTGALRNLV 105
                 689999********************************96 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.42
                 HHHHHTT....TSSHHHHHHHHHHHHHH CS
         Arm  16 pLvrLLs....sedeevqeeAawALsNL 39 
                 + ++LL+    s+++  +  ++++L N+
  EPX71010.1 238 AIIDLLHfymkSDSPLAKVYSVGCLFNI 265
                 6688888888899999999999999997 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 0.82
                 HHHHHHTTTSSHHHHHH CS
         Arm  15 ppLvrLLssedeevqee 31 
                   L +LL+s  e+ +ee
  EPX71010.1 347 SSLTSLLQSLAEGHVEE 363
                 55778999999988775 PP

  == domain 4  score: -3.1 bits;  conditional E-value: 1
                 SHHHHHHHHHTTHHHHH CS
         Arm   1 nsenkdavieaGavppL 17 
                 ns+ ++++ ++ ++p L
  EPX71010.1 408 NSKLIEYMLDS-VLPKL 423
                 68899999999.99988 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0     0.064   5.7e+02      34      55 .]      41      62 ..      33      62 .. 0.84
   2 !   14.1   0.1   5.6e-06      0.05       7      55 .]      55     104 ..      49     104 .. 0.93
   3 ?   -3.0   0.0       1.3   1.1e+04      37      52 ..     247     262 ..     231     262 .. 0.78

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.064
     HEAT_EZ 34 lalLnddsdeVRaaAagaLgnl 55
                l++L++++++ R  Aa a++ +
  EPX71010.1 41 LSRLENPEAKERSWAASAISSI 62
                569999************9976 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 5.6e-06
     HEAT_EZ   7 AawaLGr.laggepellqplvpeilpaLlalLnddsdeVRaaAagaLgnl 55 
                 Aa+a+++ + +     lq+l   ++  L+++L+dds eV   + gaL+nl
  EPX71010.1  55 AASAISSiIVSSSEGRLQLLKNGLVSKLMNRLTDDSIEVVVEVTGALRNL 104
                 8999999988889999*******************************997 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 1.3
     HEAT_EZ  37 LnddsdeVRaaAagaL 52 
                 +++ds++ + +++g+L
  EPX71010.1 247 MKSDSPLAKVYSVGCL 262
                 6788889999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (670 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       766  (0.0427241); expected 358.6 (0.02)
Passed bias filter:                      596  (0.0332422); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.29s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 4597.08
//
Query:       EPX71011.1  [L=694]
Description: MutL family protein Mlh1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.8e-70  236.8   1.8      1e-69  235.0   1.8    2.0  1  Mlh1_C          DNA mismatch repair protein Mlh1 C-terminus
    3.5e-25   88.0   0.1    6.4e-25   87.1   0.1    1.5  1  DNA_mis_repair  DNA mismatch repair protein, C-terminal domai
    1.1e-11   44.7   0.0    3.4e-11   43.1   0.0    1.8  2  HATPase_c_3     Histidine kinase-, DNA gyrase B-, and HSP90-l
    1.7e-06   28.5   0.0    5.1e-06   27.0   0.0    1.8  1  HATPase_c       Histidine kinase-, DNA gyrase B-, and HSP90-l


Domain annotation for each model (and alignments):
>> Mlh1_C  DNA mismatch repair protein Mlh1 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  235.0   1.8   2.2e-73     1e-69       1     270 []     457     694 .]     457     694 .] 0.95

  Alignments for each domain:
  == domain 1  score: 235.0 bits;  conditional E-value: 2.2e-73
                 --HHHHHHHHHHHHHB-HHHHHHHHT-EEEEEEET..TEEEEEETTEEEEEEHHHHHHHHHHHHHHHHTT--EEEE-G-.-BHHHHHTTS-SHH..... CS
      Mlh1_C   1 kltsvkelraeveesahkeLteilanltfVGlvde..rlaliQhgtkLylvdygalskelfyqllLtdFgnfgeikLeeplslkeLlelaleeeeeeee 97 
                 +l+s+++l++ev +s+h   t+il+++++VGlv +  r+a+iQh+  Lylvdyg+l++++fyq++Lt+F+n+g+i +++p++l+++l +++++e+    
  EPX71011.1 457 ELESIRQLQNEVLNSMHLLATNILSEHKYVGLVCPnkRIAAIQHNIGLYLVDYGKLAYHFFYQICLTEFANYGKIYMNPPIPLEKILAVSFTDED---- 551
                 589******************************9999**************************************************99999986.... PP

                 ............HHHHHHHHHHHTHHHHHHHH--EETT-EEEEEEEE-STT----STTHHHHHHHHHHT.S-TTSHHHHHHHHHHHHHHHHS----.-- CS
      Mlh1_C  98 eeseeedkskeelaekivelLiekaemLeeyFsieidedgellslPlllkgytpslekLPlfllrLate.VdWeeekeCfetilrelAlfyapeqlpek 195
                            el +k  +lLi +++mL+eyFsiei+++g l++lP+l kgy p +++LPlfl  + ++ VdW +e++C+e+++++lA+fy+p +l + 
  EPX71011.1 552 ----------VELYQKTRKLLIARRDMLNEYFSIEISAEGFLSALPCLSKGYKPFVNRLPLFLKGISPDyVDWLDERACLEGVMKALAKFYVPIRLLP- 639
                 ..........26899****************************************************988**********************877765. PP

                 -....-T.T-...TTS-HHHHHHHHHHHHHHHHHHHHTHHHHHHHH---BGGGGG..GEEEEEEHHHHHHHS--- CS
      Mlh1_C 196 eeseekaseeekeeeeeeeeeeeaeerreelkwvlehvlfpaikarllppksllkdgtvvevasledLYkVFERC 270
                                     +++++e+ + ++++le+ +fp +++rl++pk+l ++ ++++vasl++LY VFERC
  EPX71011.1 640 --------------------DNATSEEISYMERILEEFFFPEFRRRLICPKELFEQMAIFQVASLPRLYTVFERC 694
                 ....................3345667789********************************************* PP

>> DNA_mis_repair  DNA mismatch repair protein, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.1   0.1   1.4e-28   6.4e-25       2     118 ..     227     347 ..     226     348 .. 0.88

  Alignments for each domain:
  == domain 1  score: 87.1 bits;  conditional E-value: 1.4e-28
                     HHHHHHHHHCCEEEEEEEETT.....EEEEEEEE-CCG-BTTGGEEEEEETTEEE--HHHHHHHHHHHHCCSSSSSB-EEEEEEEESSGGEE-TS CS
  DNA_mis_repair   2 aavlgkevaenlleiekeeeq.....lkieGfiskpelsrskrdkqflfvNgRlvkskelkkaireaYkellpkgrypvvvLnleidpeevDvNv 91 
                     ++v+g+  +++l  ++  e +     ++ +G+is++++  +k +  ++f+N+Rlv+s elk+ai+e+Y+++l+kg   +v+L+l+++pe+vDvN 
      EPX71011.1 227 RHVFGTLAVKHLKALKIPEGTinvesFHADGLISSADYEDKK-SIFIVFINNRLVESIELKNAIDETYSKFLHKGASYFVYLSLSMKPEQVDVNF 320
                     67778888887755553333333666999********99987.99************************************************** PP

                     STT----EETTHHCHHHHHHHHHHHHH CS
  DNA_mis_repair  92 hPtKreVrfqdeeevieaieealkeal 118
                     hP+Kr V+f  ++e+i ai+++l e+l
      EPX71011.1 321 HPSKRIVHFLYDHEIIGAISDKLAELL 347
                     ***********************9987 PP

>> HATPase_c_3  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.1   0.0   7.7e-15   3.4e-11       3     100 ..      31     128 ..      28     147 .. 0.87
   2 ?   -3.3   0.0       1.7   7.4e+03      51      90 ..     184     222 ..     180     226 .. 0.63

  Alignments for each domain:
  == domain 1  score: 43.1 bits;  conditional E-value: 7.7e-15
  HATPase_c_3   3 lekAlaelvdNsldAdaenvkievnknrgktgeivieDdGkGmseeelkn.alrlatsskeakrkstslGkkGi.GlklAslslgkkltvitkkeges 98 
                  +e A+ el++N+ldA ++++++ +++     + ++i D+G+G+ +++l     r+ ts+ e+ ++ +++  +G+ G  lAs+s  +k+t++tk eg+ 
   EPX71011.1  31 PENAVKELLENALDAGSTSIEVLLKDG--GLKLLQISDNGAGIHYDDLPYlCQRFSTSKLEKFEDLQQIQTFGFrGEALASISHVAKVTITTKREGDL 126
                  489**********************95..5799****************94446887777777788888888888899*****************997 PP

  HATPase_c_3  99 st 100
                   +
   EPX71011.1 127 HA 128
                  64 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.7
  HATPase_c_3  51 knalrlatsskeakrkstslGkkGiGlklAslslgkkltv 90 
                  ++ l+l+++   + +++ s + k +G   As+sl+++l++
   EPX71011.1 184 RRILNLMQKYAIH-SEKVSFSCKKVGETVASISLSSRLSI 222
                  5566666665553.34444555558888888888888776 PP

>> HATPase_c  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.0   0.0   1.1e-09   5.1e-06       6      75 ..      31     103 ..      27     164 .. 0.63

  Alignments for each domain:
  == domain 1  score: 27.0 bits;  conditional E-value: 1.1e-09
                 HHHHHHHHHHHHHHHHSTTTEEEEEEEEEETEEEEEEEESSSSSTTHHHTGTCSTTCH......HCSTCHTSTSSS CS
   HATPase_c   6 LrqiisnlvdNavkfatkageieveikaseddlvisveDnGiGipkedlkklfekfsq......ddstkrggggtG 75 
                  + ++++l++Na+++   +++iev +k + + + ++++DnG Gi  +dl+ l ++fs+      +d ++++++g+ 
  EPX71011.1  31 PENAVKELLENALDA--GSTSIEVLLK-DGGLKLLQISDNGAGIHYDDLPYLCQRFSTsklekfEDLQQIQTFGFR 103
                 567899********6..7899999999.4478888***************99999999888877444444443332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (694 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       705  (0.0393218); expected 358.6 (0.02)
Passed bias filter:                      421  (0.0234815); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.62u 0.30s 00:00:00.92 Elapsed: 00:00:00.45
# Mc/sec: 4634.99
//
Query:       EPX71012.1  [L=353]
Description: atypical/RIO/RIO2 protein kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.9e-52  176.0   0.1    1.1e-51  175.1   0.1    1.4  1  RIO1      RIO1 family
      2e-31  108.0   0.1    3.8e-31  107.1   0.1    1.5  1  Rio2_N    Rio2, N-terminal
    1.9e-14   54.2   0.9    1.1e-06   28.8   0.0    2.8  2  APH       Phosphotransferase enzyme family
    2.2e-05   23.9   0.0    0.00081   18.8   0.0    2.3  1  Kdo       Lipopolysaccharide kinase (Kdo/WaaP) family
  ------ inclusion threshold ------
      0.082   12.3   0.1       0.18   11.1   0.1    1.6  1  Pkinase   Protein kinase domain


Domain annotation for each model (and alignments):
>> RIO1  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.1   0.1   3.1e-55   1.1e-51       1     181 [.     108     279 ..     108     287 .. 0.95

  Alignments for each domain:
  == domain 1  score: 175.1 bits;  conditional E-value: 3.1e-55
                 EEEEEEETTTEEEEEEEE-S---SS-HHHHCTTTSTTSTCG--GS-HHHHHHHHHHHHHHHHHHHHHTT--S--EEEEETTEEEEE--EETTEEGGBHH CS
        RIO1   1 nVyhavsedgkevaiKiyktstteFkkrkkyvsgekrfkdrksktnprklvklwaekEfrnLkrleeagvpvPkpielkrhvlvmefigedgvaapklk 99 
                 +Vy++ +++gk++++Ki+++++t+F+++k+ +++ ++    ++++++++l++l+a+kE++ +k l+e+g+p+Pkpi++ rh+++mefi+   +++  ++
  EPX71012.1 108 DVYVVSDQKGKQYILKIHRLGRTSFRSVKNNRDYLRN----RKTSSWQYLSRLAATKEYTFMKILYEHGFPIPKPIDHSRHCVIMEFID--AFPLRAIE 200
                 69********************************999....6789********************************************..9******* PP

                 HCG-HHHHHHHHHHHHHHHHHHHHTSTEEESS-STTSEEEETT.EEEE--GTTEEETTSTTHHHHHHHHHHHHHHHHHTTC-- CS
        RIO1 100 dveeeeeaeelyeevleemrklykeaglvHaDLSeyNvlvded.kvviIDvsQaveldhpnalefLerDveniikfFrrkgve 181
                 +v+   + ++ly+++++ + ++  ++gl+H+D +e+N++v+ed  +viID++Q+v+++hp+a++++erD+++i+++F++++ +
  EPX71012.1 201 EVR---DPADLYQKLIDILVRFA-RNGLIHGDYNEFNIIVHEDgTPVIIDFPQMVSTNHPDAKWYFERDLNCIVDYFKKHYLY 279
                 **9...8899*******666655.*******************9***********************************9875 PP

>> Rio2_N  Rio2, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.1   0.1   1.1e-34   3.8e-31       1      82 []       9      91 ..       9      91 .. 0.99

  Alignments for each domain:
  == domain 1  score: 107.1 bits;  conditional E-value: 1.1e-34
      Rio2_N  1 lryLskedfrvLtavEmgmrnhevVptelieeisrlkeeevkkrlsrllkaklisr.ktakydGYkLtyeGyDyLALktlvkr 82
                +ryLs+edfr LtavEmg+rnhevVpt++i++i++l+ + + k+ls l  +kli++  +++ydGY+Lt +GyDyLA+k+l+kr
  EPX71012.1  9 MRYLSAEDFRTLTAVEMGSRNHEVVPTTMINQIAKLRGGTCAKSLSVLYMTKLIAKmPHISYDGYRLTSAGYDYLAMKALSKR 91
                89*******************************************************9***********************98 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.8   0.0     3e-10   1.1e-06       4     107 ..     100     221 ..      97     223 .. 0.74
   2 !   23.1   0.5   1.7e-08     6e-05     165     201 ..     221     256 ..     220     258 .. 0.86

  Alignments for each domain:
  == domain 1  score: 28.8 bits;  conditional E-value: 3e-10
                 EE--.SSCEEEEEEETT.--EEEEE.................E-TTS-HHHHHHHHH....................HHHHHHHTT-B--B-CTTBS-E CS
         APH   4 elsggasnrtylvttpa.gryvlrr.................npparaaeeirreva....................llrlLakagvpvPevlagdtdd 64 
                 +++ g ++++y v + + ++y+l++                               +                    +++ L ++g+p+P++++    +
  EPX71012.1 100 QIGVGKESDVYVVSDQKgKQYILKIhrlgrtsfrsvknnrdyL-------------RnrktsswqylsrlaatkeytFMKILYEHGFPIPKPID----H 181
                 7899*************66******555555555555555550.............155555555555555555555*****************....4 PP

                 EETTEEEEEEE----EE-SSHHHHHHHHHHHHHHHHHHCCHHC CS
         APH  65 eeigllfalieyvpgrsllrklsaaqlpellealgeflaalhq 107
                   +   +++i   p r +++    ++  +l+++l++ l ++ +
  EPX71012.1 182 SRHCVIMEFIDAFPLRAIEE---VRDPADLYQKLIDILVRFAR 221
                 55555677777777777777...***************99976 PP

  == domain 2  score: 23.1 bits;  conditional E-value: 1.7e-08
                 -EEEE-SS-SGGGEEEC..TTEEEEE---.TT-EEEEC CS
         APH 165 ptvllHgDlhpgNllvdpddgrvtGviDf.edaglgpp 201
                 + +l+HgD++  N++v++d+++v  +iDf +++++ +p
  EPX71012.1 221 RNGLIHGDYNEFNIIVHEDGTPV--IIDFpQMVSTNHP 256
                 5689*******************..****667666665 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   2.3e-07   0.00081      47     186 ..     146     269 ..     111     287 .. 0.80

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 2.3e-07
         Kdo  47 dlyrfk.lgrtravrEfrllkrLeeagvavpkpvaagavkvgleyrAlllterlegaqdLedllakwaelaeelkrallkavgrliaklhragvnHadl 144
                    +++ l+r+ a +E+  +k L+e g+++pkp+      v +e+  +   +++e+++d +dl++k               +  +  ++ r g+ H+d 
  EPX71012.1 146 KTSSWQyLSRLAATKEYTFMKILYEHGFPIPKPIDHSRHCVIMEFIDAFPLRAIEEVRDPADLYQK---------------LIDILVRFARNGLIHGDY 229
                 44578889**************************98877777775555555777777777777775...............556677999********* PP

         Kdo 145 yaknillqqeeeeeaeiwliDldkarlrlr.adrwr.ekdLarL 186
                 +  ni +++++    + ++iD+ +        ++w  e+dL+ +
  EPX71012.1 230 NEFNIIVHEDG----TPVIIDFPQMVSTNHpDAKWYfERDLNCI 269
                 **********9....999****8876555446677436677655 PP

>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   5.2e-05      0.18       1     142 [.      95     247 ..      95     262 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 5.2e-05
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH........HHHHHHHHHHHHHSCTTB--EEEEEEE..........SSEEEEEEE--T CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkke........kkvlrEikilkklkhpnivrlyevfee..........kdelylvleyve 81 
                 y++ +++G G+ + Vy +  +++gk++ +K+ +  +++ ++         ++ ++  ++l +l   +  +++++++e          +++ ++++e+++
  EPX71012.1  95 YSVGNQIGVGKESDVYVVS-DQKGKQYILKIHRLGRTSFRSVknnrdylrNRKTSSWQYLSRLAATKEYTFMKILYEhgfpipkpidHSRHCVIMEFID 192
                 678899**********988.69999*****988766554333124445555555566666666666666666666669*******99999999****** PP

                 TEBHHHHHHHHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SG CS
     Pkinase  82 ggeladllerkgslseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDF 142
                    l  + e       ++  ++ ++++  l    ++g+iH D    Ni+++e+g   i+DF
  EPX71012.1 193 AFPLRAIEE------VRDPADLYQKLIDILVRFARNGLIHGDYNEFNIIVHEDGTPVIIDF 247
                 777766654......46677778888888888889*************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (353 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1125  (0.0627475); expected 358.6 (0.02)
Passed bias filter:                      558  (0.0311228); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 2465.30
//
Query:       EPX71013.1  [L=648]
Description: F-box protein Pof10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.2e-12   45.5   1.6    9.9e-12   44.6   1.6    1.5  1  F-box-like   F-box-like
    4.2e-08   32.9   1.0    9.9e-08   31.7   1.0    1.5  1  F-box        F-box domain
     0.0012   18.6   8.0       0.01   15.7   0.3    2.7  2  UIM          Ubiquitin interaction motif
     0.0032   18.3   2.6        0.8   10.7   0.0    4.8  6  WD40         WD domain, G-beta repeat
     0.0053   17.0   0.0         29    5.1   0.0    4.7  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
  ------ inclusion threshold ------
       0.75    9.6  11.0        3.4    7.5   0.1    3.1  3  RAP80_UIM    RAP80 N-terminal ubiquitin interaction motif


Domain annotation for each model (and alignments):
>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.6   1.6   3.3e-15   9.9e-12       1      47 [.      15      60 ..      15      61 .. 0.95

  Alignments for each domain:
  == domain 1  score: 44.6 bits;  conditional E-value: 3.3e-15
  F-box-like  1 isrLPdEiLlqIFsyLppsdLlrlalVCrrWrrvaldtplLWrrlvl 47
                i++LP EiL+ IFs+L+p++Ll++ ++C+ W+r+ +d+ l Wr+ ++
  EPX71013.1 15 IQNLPKEILIIIFSFLEPRSLLSIQCTCKFWNRLLSDD-LSWRTAFF 60
                679*********************************99.****9876 PP

>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.7   1.0   3.3e-11   9.9e-08       3      45 ..      15      57 ..      14      59 .. 0.95

  Alignments for each domain:
  == domain 1  score: 31.7 bits;  conditional E-value: 3.3e-11
                HHHS-HHHHHHHHHTS-HHHHHHHCTT-HHHHHHHTTHHHHHH CS
       F-box  3 lsrLPsevlrhILerLplsdllalrrVSkgwrilidsdrlwck 45
                + +LP e+l  I+++L++++ll++ +++k w++l+ +d  w++
  EPX71013.1 15 IQNLPKEILIIIFSFLEPRSLLSIQCTCKFWNRLLSDDLSWRT 57
                679***********************************99986 PP

>> UIM  Ubiquitin interaction motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.4   2.6    0.0065        19       1      16 [.     569     584 ..     569     584 .. 0.95
   2 !   15.7   0.3   3.4e-06      0.01       1      16 [.     632     647 ..     632     648 .] 0.93

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0065
         UIM   1 dEdedLqrAlalSlqE 16 
                 +E+e L++A  lS +E
  EPX71013.1 569 SEEELLAYATMLSEEE 584
                 7************998 PP

  == domain 2  score: 15.7 bits;  conditional E-value: 3.4e-06
         UIM   1 dEdedLqrAlalSlqE 16 
                 +E+e++++A++lSl+ 
  EPX71013.1 632 TEEEQIELAMRLSLEG 647
                 7*************96 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       4.2   1.3e+04      32      38 .]      40      46 ..      39      46 .. 0.88
   2 !   10.7   0.0   0.00027       0.8       8      38 .]     198     235 ..     190     235 .. 0.75
   3 ?   -0.8   0.0       1.1   3.4e+03       2      23 ..     240     262 ..     239     268 .. 0.76
   4 ?   -1.4   0.0       1.8   5.4e+03      11      21 ..     338     348 ..     330     350 .. 0.77
   5 ?    2.7   0.0     0.086   2.6e+02       3      36 ..     353     396 ..     351     398 .. 0.73
   6 ?   -1.6   0.0       2.1   6.3e+03       1      16 [.     447     468 ..     447     490 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 4.2
                SEEEEEE CS
        WD40 32 gtvriWd 38
                +t+++W+
  EPX71013.1 40 CTCKFWN 46
                79****8 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00027
                 ESSSS.EEEEE.....EETTSSE.EEEEETTSEEEEEE CS
        WD40   8 tGHss.vtsla.....fspdgaw.lasGsdDgtvriWd 38 
                 + H++ +t+++      +p g   +++G dDg+v  Wd
  EPX71013.1 198 DSHNDaITCMDvypgdLPPIGEIgMITGADDGSVNCWD 235
                 579556****76665555555559889**********9 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 1.1
                 EEEEEEESS.SSEEEEEEETTSS CS
        WD40   2 qclrtltGH.ssvtslafspdga 23 
                  clr+++   s + s+++ p  +
  EPX71013.1 240 VCLRSFRFStSQILSVCYRPRFK 262
                 79999998866699998776555 PP

  == domain 4  score: -1.4 bits;  conditional E-value: 1.8
                 SSEEEEEEETT CS
        WD40  11 ssvtslafspd 21 
                 + vts++f+p+
  EPX71013.1 338 NKVTSFDFDPS 348
                 359*****998 PP

  == domain 5  score: 2.7 bits;  conditional E-value: 0.086
                 EEEEEESSSSEEEEE............EETTSSEEEEEETTSEEEE CS
        WD40   3 clrtltGHssvtsla............fspdgawlasGsdDgtvri 36 
                 ++ +l G  +v +l+            +  + ++l+ G+d+g+v+i
  EPX71013.1 353 LVIHLQGN-PV-CLCldtnervinkpiVGNNARLLSVGDDNGNVYI 396
                 56677777.88.5554488888888877777777888999999988 PP

  == domain 6  score: -1.6 bits;  conditional E-value: 2.1
                 TEEEEEEESS.SS.....EEEE CS
        WD40   1 gqclrtltGH.ss.....vtsl 16 
                 g++lr l+G  ++     v+++
  EPX71013.1 447 GNLLRNLSGArNParrdaVRCI 468
                 5788999999888888999999 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.38   1.1e+03      50      80 ..     120     150 ..      99     208 .. 0.72
   2 ?    2.1   0.0      0.08   2.4e+02      54      86 ..     223     254 ..     218     264 .. 0.85
   3 ?    2.6   0.0     0.055   1.6e+02      48      74 ..     380     406 ..     331     411 .. 0.83
   4 !    5.1   0.0    0.0096        29      49      82 ..     426     459 ..     417     473 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.38
  ANAPC4_WD40  50 gklLavaysdgevrlldaesgkvvhslsvks 80 
                  g+l+a     g++++ d ++gkv +s+  +s
   EPX71013.1 120 GRLFAGNRLTGSISISDPNTGKVERSVLHAS 150
                  6666666777777777777777765553333 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.08
  ANAPC4_WD40  54 avaysdgevrlldaesgkvvhslsvksekavtc 86 
                    + +dg+v+  d+ +g +++s++ ++++ + +
   EPX71013.1 223 ITGADDGSVNCWDVRTGVCLRSFRFSTSQ-ILS 254
                  56889******************999885.655 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.055
  ANAPC4_WD40  48 pdgklLavaysdgevrlldaesgkvvh 74 
                  ++ +lL v+ ++g+v ++++  ++  h
   EPX71013.1 380 NNARLLSVGDDNGNVYIVNSRFKEFRH 406
                  677899999999999999988777666 PP

  == domain 4  score: 5.1 bits;  conditional E-value: 0.0096
  ANAPC4_WD40  49 dgklLavaysdgevrlldaesgkvvhslsvksek 82 
                  ++ +++v+ s g   ++d+ sg+++++ls +++ 
   EPX71013.1 426 NEAVIVVGSSTGFSAIYDVISGNLLRNLSGARNP 459
                  7899*********************999876654 PP

>> RAP80_UIM  RAP80 N-terminal ubiquitin interaction motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       1.2   3.6e+03      35      44 ..      81      90 ..      75      93 .. 0.84
   2 ?    3.6   5.7     0.019        56       5      41 ..     565     601 ..     559     605 .. 0.89
   3 ?    7.5   0.1    0.0011       3.4       5      21 ..     628     644 ..     626     647 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 1.2
   RAP80_UIM 35 EEeLLRkAiA 44
                 E LLR Ai 
  EPX71013.1 81 QEYLLRSAIT 90
                699*****96 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.019
   RAP80_UIM   5 iaqmtEeEqFALALkmsEqEArqvndqeEeEEeLLRk 41 
                 +a ++EeE  A A  +sE E ++       E +LLR 
  EPX71013.1 565 LADLSEEELLAYATMLSEEEEMRRLRESAAEQDLLRE 601
                 5899**************9999888888889999996 PP

  == domain 3  score: 7.5 bits;  conditional E-value: 0.0011
   RAP80_UIM   5 iaqmtEeEqFALALkms 21 
                 i+++tEeEq  LA+++s
  EPX71013.1 628 ITELTEEEQIELAMRLS 644
                 899***********998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (648 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       755  (0.0421105); expected 358.6 (0.02)
Passed bias filter:                      557  (0.031067); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.58u 0.27s 00:00:00.85 Elapsed: 00:00:00.41
# Mc/sec: 4749.60
//
Query:       EPX71014.1  [L=616]
Description: ATP citrate synthase subunit 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-15   57.6   0.0    3.9e-15   56.3   0.0    1.8  2  CoA_binding   CoA binding domain
    1.9e-15   56.8   0.0    1.6e-14   53.7   0.0    2.2  1  Citrate_synt  Citrate synthase, C-terminal domain
    5.9e-14   52.2   0.0      1e-13   51.4   0.0    1.4  1  Ligase_CoA    CoA-ligase
    1.1e-07   31.7   0.0    1.7e-06   27.9   0.0    2.3  2  Succ_CoA_lig  Succinyl-CoA ligase like flavodoxin domain


Domain annotation for each model (and alignments):
>> CoA_binding  CoA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.3   0.0   8.8e-19   3.9e-15       2      96 .]      16     121 ..      15     121 .. 0.98
   2 ?   -3.9   0.1         4   1.8e+04       2      10 ..     135     143 ..     134     148 .. 0.84

  Alignments for each domain:
  == domain 1  score: 56.3 bits;  conditional E-value: 8.8e-19
                  TTEEEEEETTTSHHHHHHHHHHHHHHECEEEEEEC-TTTTTCEET.........TEEEESCHHHHHHHC.TTTEEEEES-HHHHHHHHHHHHH.TT-S CS
  CoA_binding   2 kdtkviviGagglgiaglyhfkeklkygikavfgvnprkvgtevl.........glpvyksvdeleekt.evdvavitvPaesaqeavdelve.agik 88 
                  k+t+ +v+G++ ++ +g+++f+  +++++++v+ + ++++g+ +           lpvy sv+e+ +k+ +vdv v +++++sa  +++el++  +i+
   EPX71014.1  16 KETRSFVYGMQTKAVQGMLDFDYLCGRQVPSVAAIIYTFGGQSITkmywgtkeiLLPVYRSVEEACTKHpDVDVVVNFASSRSAFPSTMELMDyPQIR 113
                  78999****************************************************************88*************************** PP

                  EEEEESST CS
  CoA_binding  89 giviiteg 96 
                   i+ii+eg
   EPX71014.1 114 CIAIIAEG 121
                  ******97 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 4
                  TTEEEEEET CS
  CoA_binding   2 kdtkviviG 10 
                  k+++v++iG
   EPX71014.1 135 KEKNVVIIG 143
                  789999999 PP

>> Citrate_synt  Citrate synthase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.7   0.0   3.6e-18   1.6e-14     147     352 ..     386     598 ..     332     607 .. 0.76

  Alignments for each domain:
  == domain 1  score: 53.7 bits;  conditional E-value: 3.6e-18
                   TTSSHHHHHHHHHHSS---HHHHHHHHHHHHHHS--SSSHHHHHHHHHHT.TT--HHHHHHHHHHHHTSTTTTTHHHHHHHHHHHHSSGG.GHHHHH CS
  Citrate_synt 147 dklsyaenflymlrgkkpdeeeaklldlalvlhaDHelnaSTfaarvvaS.tladlysaiaagigalkGplhgganeavlkmleeigsaeveveeyl 242
                   d+l +   +  ++++++    + k+l+++l l aDH+  +S ++  +++  ++ dl+s++++g+ +  G + gga + + + + ++ ++ +  ++++
    EPX71014.1 386 DDLGIGGVISLLWFRRRLPSYATKFLEMILQLTADHGPCVSGAMNTIITTrAGKDLISSLVSGLLTI-GTRFGGALDGAAQEFSKAFDSGLSPRAFV 481
                   4566777777788777778899****************88877666554449**************9.7888888777777777776777799**** PP

                   HHHHHTTTS--TTBC-SSSS..S--HHHHHHHHHHHHHHTCHTHHHHHHHHHHHHHHHHHHHHCHHGCT-EB-THHHHHHHHHHT....T.--GGG. CS
  Citrate_synt 243 ekvlakekerlpGfGHrvyk..ksDpRakilkelaeelaeekgkdpllklaeeleevapevlkekeeknlypNvDfysgvlyral....g.ipeel. 331
                   ++  +++ + +pG+GHr+ +  + D R++++k+++++++    + +ll+ a ++e+v+ +    k+  nl  NvD   ++ +  l    g ++ e  
    EPX71014.1 482 DSCRKAN-KLIPGIGHRIKSrnNPDLRVELVKQYVKKHFP---STKLLDYALAVENVTTS----KK-DNLILNVDGCIAICFVDLlrncGeFTLEEa 569
                   **98875.**********96337788*********99987...899**************....34.89******8888766443222212222111 PP

                   ........HHHHHHHHHHHHHHHHHHHHH CS
  Citrate_synt 332 ........ftvlfaisRvaGwlAhileql 352
                              +f+++R++G + h l+q+
    EPX71014.1 570 neyinlgiLNGMFVLGRSIGLIGHHLDQK 598
                   22233344666777777777777777765 PP

>> Ligase_CoA  CoA-ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.4   0.0   2.3e-17     1e-13       1     151 [.     181     304 ..     181     306 .. 0.93

  Alignments for each domain:
  == domain 1  score: 51.4 bits;  conditional E-value: 2.3e-17
                 EESSHHHHHHHHHHHHHT..............T--BSEEEE-TSS--..........HHHHHHHHHHHHS-TT-SEEEEEEEESSSEHHHHHHHHHHHH CS
  Ligase_CoA   1 lvnGGtLayeamdlikealgdvasnkklknvlgseqheiidlGddaftkGrpHPmiDptkriealkklaadpevkvilldivlGygahedpaaellkai 99 
                 ++++G++++e++++i+++              + + +e i++G+d+++         +t++i++l ++ adp  k ++l +++G g +e+ +   ++ai
  EPX71014.1 181 VSKSGGMSNELNNIISHN--------------TDGVYEGIAIGGDRYP---------GTTFIDHLLRFEADPDCKLMVLLGEVG-GVEEYRV---IEAI 252
                 579***************..............***************9.........***************************.9999975...7788 PP

                 HHTT...--S-EEEEEECTTHH........HHHHHHHTTTSSEEE-SSHHHHHHH CS
  Ligase_CoA 100 keakaegrelpvvarvaGtead..pqels.eqakaleeagveiasskaqalraak 151
                 k+      ++p+va+ +Gt+    + e++ ++a+  +++++e+a +k++a r a+
  EPX71014.1 253 KNGT---IKKPIVAWAIGTCSSmfKTEVQfGHAGSFANSEMETAVAKNNAMRNAG 304
                 8887...899************88677778********************99886 PP

>> Succ_CoA_lig  Succinyl-CoA ligase like flavodoxin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0     0.067     3e+02      49      70 ..     106     127 ..     102     148 .. 0.72
   2 !   27.9   0.0   3.8e-10   1.7e-06       1     134 [.     175     317 ..     175     321 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.067
  Succ_CoA_lig  49 laedpetkvillylEsirdgrk 70 
                   l + p++++i++  E++ ++r+
    EPX71014.1 106 LMDYPQIRCIAIIAEGVPERRA 127
                   56789************98664 PP

  == domain 2  score: 27.9 bits;  conditional E-value: 3.8e-10
  Succ_CoA_lig   1 pGkialisqSGalalalldwaasrglgfskvvslGn..eadvdvadlleylaedpetkvillylEsird.grkflsaarraarkkpvvvlksGr..s 92 
                   pG++a +s+SG++  +l +  +++  g+ + + +G      +++ d l  +++dp++k+++l  E  +    + ++a+++ + kkp+v++  G+  s
    EPX71014.1 175 PGSVAYVSKSGGMSNELNNIISHNTDGVYEGIAIGGdrYPGTTFIDHLLRFEADPDCKLMVLLGEVGGVeEYRVIEAIKNGTIKKPIVAWAIGTcsS 271
                   79********************************9833457999*******************997665379*********************9877 PP

  Succ_CoA_lig  93 eagaraaashtgalagsd....avvdaafrqaGvlrvdsleelfda 134
                     +++    h g+ a+s+     + + a+r+aG+++ d++e l ++
    EPX71014.1 272 MFKTEVQFGHAGSFANSEmetaVAKNNAMRNAGIYVPDTFENLPAV 317
                   7788888999999999872221355789************998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (616 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       408  (0.0227564); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 4545.07
//
Query:       EPX71015.1  [L=209]
Description: 5-formyltetrahydrofolate cyclo-ligase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-40  139.4   0.0    1.3e-40  139.2   0.0    1.0  1  5-FTHF_cyc-lig  5-formyltetrahydrofolate cyclo-ligase family


Domain annotation for each model (and alignments):
>> 5-FTHF_cyc-lig  5-formyltetrahydrofolate cyclo-ligase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.2   0.0   7.4e-45   1.3e-40       1     187 []       6     197 ..       6     197 .. 0.92

  Alignments for each domain:
  == domain 1  score: 139.2 bits;  conditional E-value: 7.4e-45
                     HHHHHHHHHHHHHTS-HHHHHHHHHHHHHHHHTSHHHHH-SEEEE----.TTS---HHHHHHHHHTTEEEEEEEECSSCTEECEEEEEECCCCCC CS
  5-FTHF_cyc-lig   1 KqelRkqllaalralseeevaaesealsqrieslkesqeakrvalyvsv.kgeidtkelikklleegkevllPrvrlesgslkvvrlttlkeeds 94 
                     K+++R  ++++l  ls++ ++aes ++++++ sl+e+ ++k+v+l++s+   ei t el+ ++l++gk+v+lP+++ +      ++++++++ d+
      EPX71015.1   6 KKKIRSLMSKVLADLSDQLIEAESSSVCEKVLSLPEWIKSKNVCLFMSMpHMEIRTHELVHQALKQGKNVFLPKCEGRH----TMSMYQVYSTDQ 96 
                     899**********************************************888***************************....555577899999 PP

                     CCCHCTSSCE--TTECCBCGGG.G-SEEEE--SEEETTS-EE-SSTTHHHHHHHHHTS.T-SS-....-EEEEE--GGGEES..-----ST---- CS
  5-FTHF_cyc-lig  95 lesgkyglkePeeeeerelale.kldlvlvPgvAfdkeGaRlGkGkGyyDrflarlkg.gagdk....pltvglaldeqlve..rlPleehDvpv 181
                     l+ +k++++eP    ++    e   dl+++PgvAfd + aRlG+G+GyyD+f+ r+k+   +++     ++vg++l+eq++   ++P+++ D+ +
      EPX71015.1  97 LIINKWQIPEPDGLSPKVMDDEiYCDLIIMPGVAFDSNLARLGHGRGYYDDFIHRYKAwCSQNSsrcdIYKVGICLSEQVLPnhQIPMSPLDEFL 191
                     999**********99998887789********************************99866554222269***********999*********** PP

                     SEEE-S CS
  5-FTHF_cyc-lig 182 devvte 187
                     d ++t+
      EPX71015.1 192 DLLITP 197
                     ***997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       631  (0.0351944); expected 358.6 (0.02)
Passed bias filter:                      534  (0.0297841); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1505.83
//
Query:       EPX71016.1  [L=216]
Description: hypothetical protein SOCG_01237 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     0.0086   16.0   0.3      0.015   15.2   0.3    1.4  1  Strep_SA_rep  Streptococcal surface antigen repeat
  ------ inclusion threshold ------
      0.072   13.1   0.1       0.14   12.2   0.1    1.5  1  THEG4         Testis highly expressed protein 4


Domain annotation for each model (and alignments):
>> Strep_SA_rep  Streptococcal surface antigen repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.3   1.7e-06     0.015       4      20 ..     106     122 ..     105     126 .. 0.87

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.7e-06
                   XXHHHHHHHHHHHHHHH CS
  Strep_SA_rep   4 eaKLakYeaeLAaVQKa 20 
                   +aKL++++a L++V+ +
    EPX71016.1 106 QAKLTAMQASLERVNLE 122
                   9*************955 PP

>> THEG4  Testis highly expressed protein 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   1.5e-05      0.14     134     189 ..      38      95 ..       8     104 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.5e-05
       THEG4 134 qassPlplpifqevpfalslcnlPPllnhsvsyPlat..cpernvkfhslPtlahgdk 189
                 q  s lp+ +  +       c+l P++   +syP+ +   p+++v+  sl t+++++ 
  EPX71016.1  38 QKYSNLPCKVSPNTEEKRHTCELSPVIAEHISYPVRKidLPKKAVESLSLSTISNDEF 95 
                 55566677777777777889***************873369**********9987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       684  (0.0381505); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1606.41
//
Query:       EPX71017.1  [L=1324]
Description: transcription factor tfiiic complex b box binding subunit sfc3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.9e-17   62.2   0.1    1.1e-16   60.7   0.1    1.9  1  B-block_TFIIIC   B-block binding subunit of TFIIIC
     0.0021   18.2   0.0     0.0057   16.8   0.0    1.8  1  Myb_DNA-binding  Myb-like DNA-binding domain
     0.0044   17.2   0.0      0.017   15.4   0.0    2.1  1  Myb_DNA-bind_6   Myb-like DNA-binding domain
  ------ inclusion threshold ------
      0.045   13.5   0.1       0.39   10.4   0.0    2.4  2  ATP_bind_3       PP-loop family
      0.083   13.1   0.2        0.4   10.9   0.0    2.3  2  SelB-wing_2      Elongation factor SelB, winged helix


Domain annotation for each model (and alignments):
>> B-block_TFIIIC  B-block binding subunit of TFIIIC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.7   0.1   3.1e-20   1.1e-16       3      73 ..     120     186 ..     118     188 .. 0.96

  Alignments for each domain:
  == domain 1  score: 60.7 bits;  conditional E-value: 3.1e-20
  B-block_TFIIIC   3 dqfklLelIassRysGitqsdLakeskqdprslfyrlksLekkgLIvkqsiidsatkksistsllvlkkyf 73 
                     ++f+lL++I+++R++Gi   +L+ke++q+prs+f+r+++Le+  LI k+si      ++++t llvlk++ 
      EPX71017.1 120 LAFELLSCISRYRHEGIDRIQLCKETRQEPRSVFGRIQALEDASLISKVSI----SRSKAQTALLVLKRFE 186
                     78*************************************************....***************6 PP

>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   1.6e-06    0.0057       1      43 [.     875     926 ..     875     929 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 1.6e-06
                      CSSSBHHHHHHHHHHHHH....HT.TC....HHHHHHHHTSS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgkWteeEdelLleavkk....hG.nr....WkkIaerlggRtekqcrsrwr 43 
                      ++ +t+eEd+ L++av      +G +     W+++ + +++R   +   r+ 
       EPX71017.1 875 KSDFTAEEDDTLIRAVVIiqvqYGgVHrnikWEAVQKCFPSRDITSLSRRYI 926
                      5789**************9999776335788***********9999888886 PP

>> Myb_DNA-bind_6  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   4.7e-06     0.017       1      48 [.     878     933 ..     878     942 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 4.7e-06
  Myb_DNA-bind_6   1 WteeEdeiL........lklvekygn.....dWknIaealnrRtpkqcfdrwknkLrpkis 48 
                     +t+eEd++L        +    +yg      +W+ ++++++ R+ +++ +r+++ +r+  +
      EPX71017.1 878 FTAEEDDTLiravviiqV----QYGGvhrniKWEAVQKCFPSRDITSLSRRYIS-IRQHTK 933
                     79*******555532222....344455559*********88***********9.876554 PP

>> ATP_bind_3  PP-loop family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00011      0.39     111     175 ..     348     418 ..     345     425 .. 0.89
   2 ?   -0.5   0.0      0.25   8.8e+02      45      88 ..     811     854 ..     785     858 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00011
                 HHHHHHHCCT--CCHHH-S-SEEEETTCCEE-CCCT-......-HHHHHHHHHHTT---B--CGGGCTTSH CS
  ATP_bind_3 111 EtfllrlargsglaglagikeaseiasirlvRPlLkv......skeeleeylkekkikwveDesNadekye 175
                 E  ++   r+sgl+gl+ ++  +++++ ++  Pl+kv      +k+ + +yl++  ++ +eD++N++++y+
  EPX71017.1 348 EFQCYVAVRNSGLDGLITLRILQKLTGLKFNKPLFKVlgslveNKSSVPDYLSHLVLTRIEDKTNKSRQYR 418
                 66777889**************************987555555799**********************996 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.25
                 HHHHHHHHHHHHTT-EEEEEE--HHHCTTSTCCCHHHHHHHHHH CS
  ATP_bind_3  45 eeaelvkelckklnikleiekvdvakkkgknleeaARelRYevl 88 
                   ++l+++l+ +l+ ++++e+ +++++  ++  ++ R+ RY+ l
  EPX71017.1 811 LAQKLLESLAPTLSQPVTTEESTLESQPLSKASNKVRKDRYAPL 854
                 3567788888899999999999999999*************866 PP

>> SelB-wing_2  Elongation factor SelB, winged helix
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       4.4   1.6e+04      31      42 ..     808     819 ..     800     820 .. 0.74
   2 ?   10.9   0.0   0.00011       0.4      14      49 ..    1273    1308 ..    1272    1314 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 4.4
                  -HCCHHHHHHHH CS
  SelB-wing_2  31 paklfqalleal 42 
                  p +l+q+lle+l
   EPX71017.1 808 PMELAQKLLESL 819
                  678999999998 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00011
                   S--EEHHHHHHHCSSSS-HCCHHHHHHHHHHTTSEE CS
  SelB-wing_2   14 rpGmskeeLrsrlaprlpaklfqallealvargila 49  
                   rpG+ + eL ++l+p+l+++ +  ++e+++ +g+  
   EPX71017.1 1273 RPGIQRKELGRILSPGLDDNELREIIEYFLIAGAAI 1308
                   8**************************999888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1324 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       872  (0.0486363); expected 358.6 (0.02)
Passed bias filter:                      496  (0.0276647); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.83u 0.29s 00:00:01.11 Elapsed: 00:00:00.45
# Mc/sec: 8832.07
//
Query:       EPX71018.1  [L=387]
Description: cathepsin D [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      4e-48  164.5   3.8    4.7e-48  164.2   3.8    1.0  1  Asp              Eukaryotic aspartyl protease
    2.9e-12   47.2   2.9    9.7e-08   32.5   0.2    2.8  3  TAXi_N           Xylanase inhibitor N-terminal
    8.8e-06   26.3   0.3      0.041   14.5   0.0    3.1  2  Asp_protease_2   Aspartyl protease
    0.00094   19.7   0.0       0.33   11.6   0.0    2.6  2  gag-asp_proteas  gag-polyprotein putative aspartyl protease
  ------ inclusion threshold ------
      0.028   14.2   0.1        0.1   12.3   0.0    1.9  2  TAXi_C           Xylanase inhibitor C-terminal


Domain annotation for each model (and alignments):
>> Asp  Eukaryotic aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.2   3.8   1.3e-51   4.7e-48       2     314 ..      74     383 ..      73     384 .. 0.91

  Alignments for each domain:
  == domain 1  score: 164.2 bits;  conditional E-value: 1.3e-51
                 EEEEEEETTTTEEEEEEEETT--SEEEEBTTESTSHCHHTSS-B-GGG-TT-EEEEEEEEEECTTSEEEEEEEEEEEEETTEEEEEEEEEEEEEESSHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         Asp   2 YfgeisiGtpeqkftvifDTGSsdlWVpsskckkssackshstydpskSstykkngkslsisYGdgsvsGflsqdtvkvggltvknqefgeatkepgst 100
                 Y  ++++Gtp q+f+v++DTGS dlWVp ++c+ +s  ++ ++ydps+Sst+ ++g++ ++ Y +g+++  ++ dt  +g+l +++q fg at+++  +
  EPX71018.1  74 YSVQVGLGTPAQTFNVLLDTGSTDLWVPMKNCTGTSCEDNPELYDPSQSSTAYNHGNTNNMGYVSGAIDTEMYSDTFRFGDLEIPDQVFGAATTASLFS 172
                 999******************************5544456789******************************************************98 PP

                 HTTSSSSEEEE-S-GGGSCGGSCCHHHHHHHTTSSSSSEEEEEE-STTSSEEEEEESSEEGGGEEEEEEEEEESS..TSSTEEEEEEEEETTEEE.... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxx.... RF
         Asp 101 flaakfdGiLGlgfkeisveeatpvfdnlvsqglikepvfsvylnreeeeggeivfGgvDeskykGsltyvpvts..kgywqielesvtvggktv.... 193
                   +  ++Gi+G++  + s e+ t+ f  l++++li+    s+ +  ++ + +++++G + +   k  + + +  +     + ++++s+ v +k+     
  EPX71018.1 173 YKTYGDSGIMGMSRGTGSFESGTNAFRALFDKKLISPATASFNIT-KNPNDSSLILGETHSDLEKKGVSWHDNNNctPDGFCVTVTSICVIDKNGnetc 270
                 88889*************************************998.89999************9999999999996666799*****999766655556 PP

                 ..EEEEEEEEEEETTCSSEEEEHHHHHHHHHHHTTEEEETTCEEEEETTGGGGSEEEEEEETTEEEEEEGGGGEEEESSSTTSEEEESE...EECCTSS CS
                 ..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxx RF
         Asp 194 ..lcssgcqailDtGTsllalptsivekiakaigakksesegeyvvdCdslsslpdisftiggakitvpvselvlkeeeseesqCilgl...vseeegd 287
                    + s+++a+lDtG+++  l+t+i++++   +g + +       + Cd+    pdi+f+++g++++ +v+++  +++    + C + +    s ++++
  EPX71018.1 271 ilEKGSKYKAVLDTGATVNLLDTKIASSLSPLLGDSGDGR-----IPCDA----PDIAFELNGQRYQWSVDDYATQQD----GACWTSFihqGSLDGNN 356
                 65567899**********************9999977777.....****7....********************9988....68*****7654557788 PP

                 SEEEEHHHHTTEEEEEETTTTEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         Asp 288 lwiLGdvFlrsayvvfdldnnrvglAe 314
                 +  +Gd+F +++++ fd++nn vg+A+
  EPX71018.1 357 QLNFGDTFFNNIFTSFDYENNMVGIAP 383
                 899**********************96 PP

>> TAXi_N  Xylanase inhibitor N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.5   0.2   2.7e-11   9.7e-08       1      52 [.      74     126 ..      74     135 .. 0.83
   2 !   14.2   0.1   1.1e-05     0.039      92     151 ..     141     197 ..     128     228 .. 0.78
   3 ?   -1.5   0.0      0.73   2.6e+03      12      29 ..     276     293 ..     272     332 .. 0.78

  Alignments for each domain:
  == domain 1  score: 32.5 bits;  conditional E-value: 2.7e-11
      TAXi_N   1 YlvsisiGtppqplklvvDtGsdltWvqCkpcka.cssqkkpvfdpsksstyk 52 
                 Y v++++Gtp+q++++++DtGs  +Wv  k+c+  + + + +++dps+sst  
  EPX71018.1  74 YSVQVGLGTPAQTFNVLLDTGSTDLWVPMKNCTGtSCEDNPELYDPSQSSTAY 126
                 99***************************999974345556678888888765 PP

  == domain 2  score: 14.2 bits;  conditional E-value: 1.1e-05
      TAXi_N  92 ssGvlatdtltlsstdgksvkvpnlvfGCgk.snlgglaa..gadGilGLGrgklSlvsqlas 151
                    ++ +dt+++     +  ++p+ vfG ++   +  +++  g +Gi+G++rg  S+ s +++
  EPX71018.1 141 IDTEMYSDTFRF-----GDLEIPDQVFGAATtA-SLFSYKtyGDSGIMGMSRGTGSFESGTNA 197
                 556788999999.....889*********9942.3333334589*************998774 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 0.73
      TAXi_N  12 qplklvvDtGsdltWvqC 29 
                  ++k+v+DtG  +  ++ 
  EPX71018.1 276 SKYKAVLDTGATVNLLDT 293
                 5799999**998766665 PP

>> Asp_protease_2  Aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.0    0.0014       5.2       8      88 ..      85     184 ..      75     185 .. 0.51
   2 !   14.5   0.0   1.2e-05     0.041       7      31 ..     275     299 ..     269     311 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0014
  Asp_protease_2   8 kpvrfllDTGasttlispelaeklglkvrese.ltvrvsgagge.vka....rlvrlds......lklggltlknvpalvld.......lgeeid 83 
                     +++++llDTG++ + ++ +  +    +  ++   + ++s+a    ++       + +d+      +++g+l+++++ +  +        +  ++ 
      EPX71018.1  85 QTFNVLLDTGSTDLWVPMKNCTGTSCEDNPELyDPSQSSTAYNHgNTNnmgyVSGAIDTemysdtFRFGDLEIPDQVFGAATtaslfsyKTYGDS 179
                     689*********99999887755544333222023344444222111100012222222444444777777777776555554445544455566 PP

  Asp_protease_2  84 glLGm 88 
                     g++Gm
      EPX71018.1 180 GIMGM 184
                     66666 PP

  == domain 2  score: 14.5 bits;  conditional E-value: 1.2e-05
  Asp_protease_2   7 GkpvrfllDTGasttlispelaekl 31 
                     G +++++lDTGa+++l++++ a +l
      EPX71018.1 275 GSKYKAVLDTGATVNLLDTKIASSL 299
                     899*******************998 PP

>> gag-asp_proteas  gag-polyprotein putative aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.4   0.0    0.0077        27       8      38 ..      85     115 ..      81     185 .. 0.70
   2 !   11.6   0.0   9.1e-05      0.33       7      31 ..     275     299 ..     271     311 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0077
                      EEEEEEEETT-SS-EEEHHHHHHTTGGGGEB CS
  gag-asp_proteas   8 kpvkflvDTGAsstiiseelaerlglsrked 38 
                      +++++l+DTG ++  ++++  + +  + +++
       EPX71018.1  85 QTFNVLLDTGSTDLWVPMKNCTGTSCEDNPE 115
                      6899*********999998877666555554 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 9.1e-05
                      TEEEEEEEETT-SS-EEEHHHHHHT CS
  gag-asp_proteas   7 gkpvkflvDTGAsstiiseelaerl 31 
                      g ++k+++DTGA+  ++ +++a  l
       EPX71018.1 275 GSKYKAVLDTGATVNLLDTKIASSL 299
                      7899*****************9987 PP

>> TAXi_C  Xylanase inhibitor C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.54   1.9e+03      25      46 ..     272     293 ..     252     296 .. 0.59
   2 ?   12.3   0.0   2.9e-05       0.1      87     160 ..     310     382 ..     304     383 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.54
                 E-S----SEEE-SSSSSEEE-H CS
      TAXi_C  25 ldktgsggtvlstgtpytvlet 46 
                 l+k  + ++vl+tg ++  l t
  EPX71018.1 272 LEKGSKYKAVLDTGATVNLLDT 293
                 4566677777888777777766 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 2.9e-05
                 ..-S----EEEEESSS-EEEE-GGGGEEE-SSSEEEE-EEE--S--SSSEEE-HHHHBTS-EEEETTTTEEEEE CS
      TAXi_C  87 ragpavPtitlvleggaewtisgenllvkveggvvClafvesgvagesavviGglqlednllvFDleksrlgFs 160
                 r+  ++P+i ++l+ g++ ++s +++  +++g  +   + +++ +g+++  +G   + ++   FD e++ +g +
  EPX71018.1 310 RIPCDAPDIAFELN-GQRYQWSVDDYATQQDGACWTSFIHQGSLDGNNQLNFGDTFFNNIFTSFDYENNMVGIA 382
                 566789********.7888888999*9**9999888888888***************************99975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (387 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       387  (0.0215851); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.50u 0.28s 00:00:00.78 Elapsed: 00:00:00.44
# Mc/sec: 2634.72
//
Query:       EPX71019.1  [L=269]
Description: hypothetical protein SOCG_01240 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.031   14.0   0.0      0.075   12.8   0.0    1.7  1  DUF4538   Domain of unknown function (DUF4538)


Domain annotation for each model (and alignments):
>> DUF4538  Domain of unknown function (DUF4538)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   4.2e-06     0.075       6      29 ..      91     114 ..      86     117 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 4.2e-06
     DUF4538   6 yvllvggvvgliglalYPiiiaPl 29 
                 +  l+gg++g+i l lY+i + P+
  EPX71019.1  91 FWGLFGGFIGAISLFLYSISLIPK 114
                 6789***************98885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (269 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       569  (0.0317363); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1898.93
//
Query:       EPX71020.1  [L=198]
Description: spindle pole body protein Spc24 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-25   89.3   5.4    1.6e-25   89.3   5.4    1.9  2  Spc24           Spc24 subunit of Ndc80
     0.0089   14.9  11.6      0.013   14.4  11.6    1.2  1  Spc7            Spc7 kinetochore protein
  ------ inclusion threshold ------
      0.063   12.8   7.4      0.077   12.6   7.4    1.1  1  Exonuc_VII_L    Exonuclease VII, large subunit
      0.067   12.9   0.5      0.088   12.5   0.5    1.2  1  Herpes_UL7      Herpesvirus UL7 like
       0.07   13.2   2.1        0.1   12.7   2.1    1.2  1  Baculo_PEP_C    Baculovirus polyhedron envelope protein, PEP,
       0.13   10.1   5.5       0.14   10.0   5.5    1.1  1  V_ATPase_I      V-type ATPase 116kDa subunit family
       0.14   11.5  14.3        0.2   11.0  14.3    1.1  1  DUF4618         Domain of unknown function (DUF4618)
       0.15   10.1   5.5       0.18    9.8   5.5    1.0  1  PEPcase         Phosphoenolpyruvate carboxylase
       0.18   11.8  17.5       0.14   12.1  11.0    2.2  2  Sec2p           GDP/GTP exchange factor Sec2p
       0.22   12.0  17.1       0.37   11.3  17.1    1.4  1  APG6_N          Apg6 coiled-coil region
       0.38   11.2  10.3       0.49   10.9  10.3    1.3  1  AAA_23          AAA domain
       0.77    9.9  18.2       0.91    9.6  10.8    2.3  2  BRE1            BRE1 E3 ubiquitin ligase
       0.88    9.4   9.6        1.3    8.9   9.6    1.2  1  PCRF            PCRF domain
       0.89    9.3  11.6       0.75    9.6   5.0    2.1  2  Spc29           Spindle Pole Component 29
       0.95    9.3  13.5        2.1    8.2  10.8    2.0  1  DUF724          Protein of unknown function (DUF724)
        3.1    7.9  10.2          4    7.5   9.5    1.5  2  Spore_III_AB    Stage III sporulation protein AB (spore_III_A
          4    7.5  10.5        6.9    6.7   9.9    1.6  1  Laminin_II      Laminin Domain II
        5.3    6.8   7.3        3.3    7.5   4.8    1.9  2  SNCAIP_SNCA_bd  Synphilin-1 alpha-Synuclein-binding domain
        5.5    6.8   8.4         12    5.7   8.4    1.5  1  zf-ZPR1         ZPR1 zinc-finger domain


Domain annotation for each model (and alignments):
>> Spc24  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.4       1.1   9.9e+02      21      38 ..      36      54 ..      21      81 .. 0.46
   2 !   89.3   5.4   1.7e-28   1.6e-25       3     104 ..      84     189 ..      82     190 .. 0.88

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 1.1
       Spc24 21 eslesel.aelkeeleele 38
                e+ ++e+ ++ ++ l+ l+
  EPX71020.1 36 ERTREEKiDDSRNILKALS 54
                4443222122222222222 PP

  == domain 2  score: 89.3 bits;  conditional E-value: 1.7e-28
       Spc24   3 dnekfriakelsdleselesleselaelkeeleeleeeseekeser...vedetllklklYrsLGiel....ekdvnkvlirnkekgdvnvlnlddkls 94 
                 d+ekf++ak+l+d+e+e+++les+l+++ke++ +l++e+e++e+     ++d++ll+l++Y+sLG++l    + +  kv++++k++  + ++++ +k++
  EPX71020.1  84 DREKFQLAKQLNDTETEIMNLESQLQRMKEQILQLQKEEEKEED-FhhyEDDAALLRLRFYHSLGFDLqsfdDMEQRKVIVYTKND--LRTVQISNKYT 179
                 89***********************************9999333.235588*****************765544477888888855..9********** PP

       Spc24  95 effianyiWd 104
                 +ff++ny+Wd
  EPX71020.1 180 PFFYSNYLWD 189
                 *********9 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4  11.6   1.4e-05     0.013     154     267 ..      21     132 ..      14     147 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 1.4e-05
        Spc7 154 dkelLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiae 252
                 d ++L+k +++   +    ee+ ++ ++ l+ l + + e++s   e L+++ e+  e+ +ei +k +e  +l +ql++ e++i +l++q ++++e+i +
  EPX71020.1  21 DLKTLSKIQDLGAHIERTREEKIDDSRNILKALSR-KLEISSQVTEALKQATESP-EHAEEILQKDREKFQLAKQLNDTETEIMNLESQLQRMKEQILQ 117
                 56666666666666666666665555555666555.4456666688999998775.56678888*********************************** PP

        Spc7 253 aervleeckgwsese 267
                  ++  e+++++ ++e
  EPX71020.1 118 LQKEEEKEEDFHHYE 132
                 *********999987 PP

>> Exonuc_VII_L  Exonuclease VII, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   7.4   8.1e-05     0.077     146     259 ..      25     138 ..      16     174 .. 0.53

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 8.1e-05
  Exonuc_VII_L 146 eeqleelerrlekaikrlleekkqrleklasrl...kspeellerkrqrldeleerleralkkqlkkkrerleelkerl.k..ekleekkerlkklk 236
                   ++++++l +++e+  +++++++++ l++l+++l   ++ +e l++++++ +++ee l++  ++++ + +++l+ +++++ +  ++l+++ke++ +l 
    EPX71020.1  25 LSKIQDLGAHIERTREEKIDDSRNILKALSRKLeisSQVTEALKQATESPEHAEEILQKD-REKF-QLAKQLNDTETEImNleSQLQRMKEQILQL- 118
                   466777777777777777777777777777777443244445555555555555555542.2222.111222222212211113333333333333. PP

  Exonuc_VII_L 237 erlelleekkerleeleekleal 259
                      ++ eek+e+++++e+  ++l
    EPX71020.1 119 ---QKEEEKEEDFHHYEDDAALL 138
                   ...23344555555555544444 PP

>> Herpes_UL7  Herpesvirus UL7 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.5   9.4e-05     0.088     141     200 ..      69     129 ..      41     143 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 9.4e-05
  Herpes_UL7 141 elldleekdseivlp..ahyklykelestelelkdllkslyetkdeaesfkLpleerktvd.e 200
                 +  +  e+++ei+++    ++l+k+l++te+e+ + l+s ++ + +++ ++L+ ee+k++d +
  EPX71020.1  69 QATESPEHAEEILQKdrEKFQLAKQLNDTETEIMN-LESQLQ-RMKEQILQLQKEEEKEEDfH 129
                 566778999999994469**************865.555555.3556999*****99999952 PP

>> Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   2.1   0.00011       0.1      21     106 ..      24     113 ..      14     120 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 0.00011
  Baculo_PEP_C  21 vLnairlqnvqilaqlatlldaietqLnalsedlksllaeldtrldtlltnLtdalnalq.....dtlrneLtnlnsiltnLlssvtNins 106
                   +L+ i+ + + i    ++ +d+  + L+als +l+  +++++++l+++++  ++a   lq      +l ++L+ +++++ nL s++  +++
    EPX71020.1  24 TLSKIQDLGAHIERTREEKIDDSRNILKALSRKLEI-SSQVTEALKQATESPEHAEEILQkdrekFQLAKQLNDTETEIMNLESQLQRMKE 113
                   678888888999888899999999*********998.788********************988766899***************9987765 PP

>> V_ATPase_I  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   5.5   0.00015      0.14      68     150 ..      40     122 ..      15     173 .. 0.54

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00015
  V_ATPase_I  68 ekeldeleeelekleeelkelnenleklkkelnelvelkavlekakefleeeeeeeeeeeseeeeeekeeeeeeeseeeeeee 150
                 e+++d+  + l+ l ++l+  ++ +e+lk+ +++ ++++++l+k +e ++ +++ +++e++  + e++ ++++e++ + ++ee
  EPX71020.1  40 EEKIDDSRNILKALSRKLEISSQVTEALKQATESPEHAEEILQKDREKFQLAKQLNDTETEIMNLESQLQRMKEQILQLQKEE 122
                 44444445555555555555555555555555555555555555444444332222211111111111111112222111111 PP

>> DUF4618  Domain of unknown function (DUF4618)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0  14.3   0.00022       0.2     127     224 ..      26     123 ..      22     131 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00022
     DUF4618 127 rqlqqlkdsqqdeldeleelikevleklskkiqkkkekllkslaektlka.tqeaLlqktlenqvlkkeiekfrefieeleeeipeLkaeveqLqaqae 224
                 +++q+l ++ ++  +e  +  +++l+ ls+k++  + +++++l + t ++ + e +lqk +e+ +l+k+++    +i +le +++++k+++ qLq++ e
  EPX71020.1  26 SKIQDLGAHIERTREEKIDDSRNILKALSRKLE-ISSQVTEALKQATESPeHAEEILQKDREKFQLAKQLNDTETEIMNLESQLQRMKEQILQLQKEEE 123
                 567777777777777777778899999999975.56678888888888877999*****************************************9987 PP

>> PEPcase  Phosphoenolpyruvate carboxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   5.5   0.00019      0.18     144     245 ..      38     138 ..      31     162 .. 0.90

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00019
                 HHHHHHHHHHHHHHHHHHH---....----HHHHHTT-SSS..............TTSHHHHHHHHHHHHHHHHHHHHHHHHHT-.-----TT---SHH CS
     PEPcase 144 qrelalekylkeveeLieeLslslelvevseellesleedkekleevyeelaerykeepYRlklaelrkrLentrerleelaekeeeeleeeeayesae 242
                  re  ++   + +++L ++L +s++++e+ ++ +es e+ +e l++  e+++  ++ +   + +++l+++L++ +e++ +l+++e e+ e+ ++ye+++
  EPX71020.1  38 TREEKIDDSRNILKALSRKLEISSQVTEALKQATESPEHAEEILQKDREKFQLAKQLNDTETEIMNLESQLQRMKEQILQLQKEE-EKEEDFHHYEDDA 135
                 6777888889999**************************************9999999999*****************9999999.6788899999988 PP

                 HHH CS
     PEPcase 243 ell 245
                 +ll
  EPX71020.1 136 ALL 138
                 886 PP

>> Sec2p  GDP/GTP exchange factor Sec2p
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.4     0.064        60      55      89 ..      39      73 ..      26      76 .. 0.85
   2 ?   12.1  11.0   0.00015      0.14      49      91 ..      84     126 ..      74     127 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.064
                HHHHHTTHCHCCCHCTSSSSHHHHCTTTXXXXXXX CS
       Sec2p 55 lkeqLkeketlleslqeqLkeLkevlekmeeesee 89
                 +e++++++++l++l+ +L+   +v e +++ +e+
  EPX71020.1 39 REEKIDDSRNILKALSRKLEISSQVTEALKQATES 73
                4789***************9999999999887765 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 0.00015
                 HHHHHHHHHHHTTHCHCCCHCTSSSSHHHHCTTTXXXXXXXXX CS
       Sec2p  49 ekkneklkeqLkeketlleslqeqLkeLkevlekmeeeseeqe 91 
                 ++++ +l +qL+++et + +l++qL+ +ke + ++++e+e++e
  EPX71020.1  84 DREKFQLAKQLNDTETEIMNLESQLQRMKEQILQLQKEEEKEE 126
                 4556689****************************99998765 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3  17.1   0.00039      0.37      23     101 ..      41     125 ..      24     140 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00039
      APG6_N  23 kerdaYeeflkklkkekkeeek......qdeeleeleeeleklekeeeelleeLkelekereeleaelaaleeelealeeeeerf 101
                 +++d+ ++ lk l ++ + +++      q +e  e  ee+ + ++e+ +l ++L+++e+e  +le++l+  +e+  +l++eee++
  EPX71020.1  41 EKIDDSRNILKALSRKLEISSQvtealkQATESPEHAEEILQKDREKFQLAKQLNDTETEIMNLESQLQRMKEQILQLQKEEEKE 125
                 3456666667777666555555667777778888888889999999999999999999999999999999999999999999864 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9  10.3   0.00051      0.49      89     180 ..      34     126 ..      10     169 .. 0.66

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00051
      AAA_23  89 siererelskkkgkttkkaklellei.deleqfisellgskkiilnlilflgqerfeefelkdkkerleelekeleeledekkllekleqeke 180
                  ier+re++ ++++++ ka  ++lei ++ ++ +++  +s +   ++++   ++ +  ++l+d++ ++ +le +l+  ++++ +l+k+e+++e
  EPX71020.1  34 HIERTREEKIDDSRNILKALSRKLEIsSQVTEALKQATESPEHAEEILQKDREKFQLAKQLNDTETEIMNLESQLQRMKEQILQLQKEEEKEE 126
                 478888888888888888888888885455555555444443333333333333333333344444555555555555555555555444433 PP

>> BRE1  BRE1 E3 ubiquitin ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   1.2     0.034        32      53      87 ..      42      72 ..      33      79 .. 0.57
   2 ?    9.6  10.8   0.00096      0.91      38      81 ..      78     124 ..      75     135 .. 0.88

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.034
        BRE1 53 skdalenelkkLnkllsKsselieqLke.lekefvr 87
                ++d+ +n lk+L+++l+ ss++ e+Lk+ +     +
  EPX71020.1 42 KIDDSRNILKALSRKLEISSQVTEALKQaT-----E 72
                345555556666666666666666666633.....3 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00096
        BRE1  38 aekakadqkyfaamrskdalenelkkLnkllsKsselieqLke...l 81 
                  e+ + d++ f++ ++ ++ e+e+ +L ++l++ +e i qL+     
  EPX71020.1  78 EEILQKDREKFQLAKQLNDTETEIMNLESQLQRMKEQILQLQKeeeK 124
                 6999**************************************95433 PP

>> PCRF  PCRF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   9.6    0.0014       1.3      14      92 ..      40     121 ..      25     131 .. 0.60

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0014
                 -GGGTTTGGGSSSTTHHHHHTHHHHHHHHHHHHHTTTHHH...HT....-S-..-GG......GTHHHHHHHHHH..HHHHHT-. CS
        PCRF  14 dpevwedqekakklskelaeleeivealeeleealedleeakelleedeelaelaee......eleelekeleeleeelkklLlp 92 
                 ++++ ++++ +k+ls++   le   +  e+l++a+e+ e+a+e+l++d+e  +la++      e+ +le++l++++e++ +l   
  EPX71020.1  40 EEKIDDSRNILKALSRK---LEISSQVTEALKQATESPEHAEEILQKDREKFQLAKQlndtetEIMNLESQLQRMKEQILQLQKE 121
                 33333333333444444...44444455566666666666677999998877787666666667999999999998887776553 PP

>> Spc29  Spindle Pole Component 29
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.6     0.013        12     109     152 ..      25      69 ..      13      77 .. 0.80
   2 ?    9.6   5.0    0.0008      0.75     113     179 ..      68     133 ..      65     185 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.013
       Spc29 109 ldsiyssvkkivelek.klddqkleIkeLkreleqqrtvnseLqe 152
                 l +i++   +i+++   k+dd +  +k+L r+le +  v ++L++
  EPX71020.1  25 LSKIQDLGAHIERTREeKIDDSRNILKALSRKLEISSQVTEALKQ 69 
                 566666666777765459*******************99999986 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.0008
       Spc29 113 yssvkkivelekklddqkleIkeLkreleqqrtvnseLqekvaeleeevkrlaalehSnrkfrsyss 179
                 ++ ++++++ e +l++ +++ + L ++l++ +t + +L +++++++e++ +l+  e+ ++ f++y++
  EPX71020.1  68 KQATESPEHAEEILQKDREKFQ-LAKQLNDTETEIMNLESQLQRMKEQILQLQKEEEKEEDFHHYED 133
                 6778899999999999999986.8999**********************999999999999999984 PP

>> DUF724  Protein of unknown function (DUF724)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2  10.8    0.0022       2.1      83     174 ..      14     115 ..      12     121 .. 0.65

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0022
      DUF724  83 hGFdVkalqsrlnkLlslkdeqtklleerkklekkieeeesekrkleeeidelekkilelerqlallk..........ekkeaadkeiarlkseaekle 171
                 +GF++   ++ l+k+  l  + ++++ee+ +  ++i ++ s+k ++++++ e  k+  e  ++++ +           ++ ++ + ei++l+s+ ++++
  EPX71020.1  14 DGFEIAPDLKTLSKIQDLGAHIERTREEKIDDSRNILKALSRKLEISSQVTEALKQATESPEHAEEILqkdrekfqlaKQLNDTETEIMNLESQLQRMK 112
                 699999999999999999999999999999999999999999999999999666666655555432221332222222444444444444444444444 PP

      DUF724 172 eel 174
                 e++
  EPX71020.1 113 EQI 115
                 444 PP

>> Spore_III_AB  Stage III sporulation protein AB (spore_III_AB)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   9.5    0.0042         4      56     150 ..      36     125 ..      20     128 .. 0.86
   2 ?   -3.4   0.0       9.9   9.3e+03     113     137 ..     146     170 ..     143     172 .. 0.73

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0042
                   HHHHHCS-TTHHHHHHHHHHHHH.STSS-HHHHHHHHHHHHGGGS---HHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHT CS
  Spore_III_AB  56 eklaeksesplseffeevaerleekegesfeeaweeavekllkklaLkkedkeilkelgeslgysdregqlkalelaleeleeeieeareeakkk 150
                   e++ e+  ++ +++++ ++++le     +++ea+++a+e+ ++   + ++d+e + +l+++l   d e+++ +le  l++++e+i ++++e +k 
    EPX71020.1  36 ERTREEKIDDSRNILKALSRKLE--ISSQVTEALKQATESPEHAEEILQKDREKF-QLAKQLN--DTETEIMNLESQLQRMKEQILQLQKEEEKE 125
                   44445555578999*******98..7999*************************9.5999998..9*************************9986 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 9.9
                   HHHHHT--SHHHHHHHHHHHHHHHH CS
  Spore_III_AB 113 lgeslgysdregqlkalelaleele 137
                   lg  l + d  +q k + +++++l+
    EPX71020.1 146 LGFDLQSFDDMEQRKVIVYTKNDLR 170
                   5666777788888888888877775 PP

>> Laminin_II  Laminin Domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   9.9    0.0073       6.9      14      84 ..      51     124 ..      40     129 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0073
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXX--TTTTTGGGHHHHHHHHHH CS
  Laminin_II  14 evleqlaplsqnlentkeklseinrsveetnekvk...dankairdArrsvkkLeklapqLldklkelkqleea 84 
                 + l+ + ++s ++ +  +++ e  +++ee+ +k +   ++ k+++d ++++ +Le +++++ +++ +l++ ee+
  EPX71020.1  51 KALSRKLEISSQVTEALKQATESPEHAEEILQKDRekfQLAKQLNDTETEIMNLESQLQRMKEQILQLQKEEEK 124
                 34666778999999999999999999999988776678999***************************999887 PP

>> SNCAIP_SNCA_bd  Synphilin-1 alpha-Synuclein-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       2.4   2.3e+03       8      20 ..      60      72 ..      57      80 .. 0.80
   2 ?    7.5   4.8    0.0035       3.3      13      35 ..      89     111 ..      87     122 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 2.4
  SNCAIP_SNCA_bd  8 ASQVVKLTKQLkE 20
                     SQV    KQ  E
      EPX71020.1 60 SSQVTEALKQATE 72
                    6999888888766 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0035
  SNCAIP_SNCA_bd  13 KLTKQLkEQTaeRInlQkhlQrL 35 
                      L KQL++  +e +nl  +lQr+
      EPX71020.1  89 QLAKQLNDTETEIMNLESQLQRM 111
                     599******************97 PP

>> zf-ZPR1  ZPR1 zinc-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   8.4     0.013        12      42     147 ..      21     130 ..      18     139 .. 0.69

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.013
     zf-ZPR1  42 evksageieekGkritlkveseedlnrqvlkSetatveipeleleippgtlegrlttvEGlLeqikeele..keegdqaer...edeekekieeflekl 135
                 ++k++++i++ G +i+ + e++ d +r++lk+ + ++ei +   e  + + + +    E +L++ +e+ +  k+ +d +++    +++ ++++e + +l
  EPX71020.1  21 DLKTLSKIQDLGAHIERTREEKIDDSRNILKALSRKLEISSQVTEALK-QATESPEHAEEILQKDREKFQlaKQLNDTETEimnLESQLQRMKEQILQL 118
                 679999********************************9886666555.34445677899999999999764333344444432113445555555555 PP

     zf-ZPR1 136 eeliegeepftl 147
                 ++  e+ee f+ 
  EPX71020.1 119 QKEEEKEEDFHH 130
                 555555556655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2842  (0.158514); expected 358.6 (0.02)
Passed bias filter:                      878  (0.0489709); expected 358.6 (0.02)
Passed Vit filter:                       136  (0.00758548); expected 17.9 (0.001)
Passed Fwd filter:                        25  (0.00139439); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              19  [number of targets reported over threshold]
# CPU time: 0.63u 0.29s 00:00:00.92 Elapsed: 00:00:00.47
# Mc/sec: 1253.56
//
Query:       EPX71021.1  [L=535]
Description: RNA polymerase I upstream activation factor complex subunit Rrn7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      2e-10   40.2   4.1    3.2e-10   39.5   4.1    1.4  1  zf-RRN7    Zinc-finger of RNA-polymerase I-specific TFIIB, Rr
     0.0023   17.5   0.7     0.0023   17.5   0.7    1.7  2  Albumin_I  Albumin I chain b


Domain annotation for each model (and alignments):
>> zf-RRN7  Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.5   4.1   3.6e-14   3.2e-10       1      32 []       5      38 ..       5      38 .. 0.96

  Alignments for each domain:
  == domain 1  score: 39.5 bits;  conditional E-value: 3.6e-14
     zf-RRN7  1 wekgppCgvCgc.rsftl.ddGfyyCrrChtqeg 32
                w+ gppC++ +c + +++ ++G+++Crr+h q+g
  EPX71021.1  5 WFQGPPCPIRNCkCIWYFkNEGQTVCRRGHIQHG 38
                899*********88******************97 PP

>> Albumin_I  Albumin I chain b
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.7   2.6e-07    0.0023       8      21 ..       6      19 ..       4      26 .. 0.94
   2 ?   -3.1   0.0       0.7   6.3e+03       1      12 [.      95     106 ..      95     107 .. 0.90

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 2.6e-07
   Albumin_I  8 FevPPCgSrdCRCi 21
                F+ PPC+ r+C+Ci
  EPX71021.1  6 FQGPPCPIRNCKCI 19
                999**********9 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 0.7
   Albumin_I   1 CSGvCSPFevPP 12 
                 CS + S  + PP
  EPX71021.1  95 CSALVSDLKFPP 106
                 999999999999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (535 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       513  (0.0286129); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.41
# Mc/sec: 3911.49
//
Query:       EPX71022.1  [L=160]
Description: translation elongation factor eIF5A [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.1e-29   99.7   0.8      1e-28   99.2   0.8    1.2  1  eIF-5a    Eukaryotic elongation factor 5A hypusine, DNA-bindi
     0.0052   16.8   0.1     0.0084   16.1   0.1    1.3  1  EFP_N     Elongation factor P (EF-P) KOW-like domain


Domain annotation for each model (and alignments):
>> eIF-5a  Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.2   0.8   1.1e-32     1e-28       1      67 [.      86     151 ..      86     153 .. 0.95

  Alignments for each domain:
  == domain 1  score: 99.2 bits;  conditional E-value: 1.1e-32
                 --EEEEEEEEEE-SS.EEEEEETT--EEE.EEGG..GB-HHHHTT--TT-E..EEEEEETTEEEEEE CS
      eIF-5a   1 nVkrkeyqLidIqdDgflsLmdddgetkeDlklpegelgkqikekfeegkdvlVtVlsamGeekiia 67 
                 +Vkr +yqL+dI dDgflsLm++dg+tk+D+++pege+g+qi+e feegkd++V+V+samGee  + 
  EPX71022.1  86 VVKRDDYQLVDI-DDGFLSLMTSDGSTKDDVRIPEGEIGQQIEEGFEEGKDLIVSVVSAMGEEIPLT 151
                 69**********.8************************************************97665 PP

>> EFP_N  Elongation factor P (EF-P) KOW-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.1   9.3e-07    0.0084       3      50 ..      26      74 ..      24      81 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 9.3e-07
                GG--TT-EEEETTEEEEEEEEEEEEETT.S--EEEEEEEETTTS-EEEE CS
       EFP_N  3 selkkGlvieidgklyvVlefehvkpGk.GqafvrvklknlrtGakvek 50
                s+l+k+  + i+g +++++e   +k Gk G a v +   ++ tG+k e 
  EPX71022.1 26 SSLRKNGHVVIKGRPCKIVEMSTSKTGKhGHAKVNIVAIDIFTGRKYED 74
                7899*********************996377888888888888888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       371  (0.0206927); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.22s 00:00:00.56 Elapsed: 00:00:00.35
# Mc/sec: 1380.48
//
Query:       EPX71023.1  [L=504]
Description: GARP complex subunit Vps52 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   9.1e-132  440.4  10.2   1.1e-131  440.1  10.2    1.0  1  Vps52     Vps52 / Sac2 family


Domain annotation for each model (and alignments):
>> Vps52  Vps52 / Sac2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  440.1  10.2    6e-136  1.1e-131      21     504 ..      15     502 ..       3     504 .] 0.94

  Alignments for each domain:
  == domain 1  score: 440.1 bits;  conditional E-value: 6e-136
       Vps52  21 nqiaaidsvleqledlLeeFqsdlssissdikklqekSnelqlrLenrkaveaklsklvddlivppelidvIiegkvneesiaekleilnkkksaekdq 119
                  q +a+++vl++++ +Le+Fq++l++++ di+k++++S ++++rL+n k ve+++++++d  i+pp li++I +g+++++s+a++le+l+ +   ek  
  EPX71023.1  15 IQFDALEKVLQKVVGSLENFQVNLDVATADINKVSQRSSDIHVRLNNMKKVESAMGAEIDTGILPPTLIKTICTGDMDHPSWATALEQLEIYIGDEKSV 113
                 4789**********************************************************************************9999886555544 PP

       Vps52 120 s......vkslkalkDvkklldkLrnkalekireyivqkiktlRkpkvnvqiiqn.kLlkvkkifeFllennrklalelrqaYidTmkkiyleyfrsYi 211
                          s ++   + +l +kL  ka+e+ir+yiv++ik +R+  v+v  +++ +L+++k +++Fl ++n +l lelr+aYi+Tm+++y ++f +Y+
  EPX71023.1 114 VnneklmLLSQESSGEQMELCQKLCYKAIERIRNYIVVTIKLFRHGLVDVASMRKhRLIAKKSYYSFLSKHNPQLSLELRKAYINTMSWYYHYHFYHYS 212
                 4221244445555566669******************************************************************************** PP

       Vps52 212 rsLtklqfeeietkddLigvedtakklffs.ktaslkkrnkiftigkRlkilk.aqldapvlvphiaeknttkyyiEalfrslelalldnatsEYlFlk 308
                   L +++++++e +    + e+++k+ f + k+ ++ + +++f+++ R + ++ +++  +++++hi++++   + +E+++ s+el+ +++a+ EY Fl 
  EPX71023.1 213 LLLSRVNIHKGELI----RPEEDRKGFFMLgKGSTQIQSSRMFSLDLRSQNFDiNSVLMASTLNHIESSP---QFLERVYFSWELVFTEHASAEYSFLV 304
                 *******9988655....*****99999889999************************************...************************** PP

       Vps52 309 efFavsgdqaeeifeqifektlslatkyleqlisdcyDaigvllsIriinrlqleaerrrvPvldsylnsvlillWPRFqlvldlnveSlrkadittlv 407
                 e+F +s d++++if+ if+ tl+l+++y+  lis + D i++l++Ir+++ l l+++++ vPv+++++  ++illWPR q ++dl+ eSl+k+ +  ++
  EPX71023.1 305 EYFELSMDEQKTIFQTIFDDTLQLSQQYVSDLISTSLDSISILKCIRFTQDLILQSQKNLVPVIEPHYTAMIILLWPRLQTIMDLHSESLQKCPLPSKP 403
                 **********************************************************************************************99998 PP

       Vps52 408 e.kdtrPHeltrryaeflsslvtlsvtvkeee.verllerlqreveslilrlaklfkkkkeqlvfLinNYdlllgvLkelsldlskeqedfqeklnena 504
                 +   + PH+lt+r++e+l+sl tls +  e+e + ++++rl ++   l+ r++  +++k++  +fL+nN++l+++vL++++++l+ +q+ ++e ln++ 
  EPX71023.1 404 DdLASTPHPLTQRVSELLYSLATLSANSLEAEpLTHSVSRLSHDFTALLYRFCEGMSDKRKRNRFLSNNFTLISTVLSGAHGKLASDQKLYFEELNDKV 502
                 857789************************999***************************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (504 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       726  (0.0404931); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 3506.09
//
Query:       EPX71024.1  [L=743]
Description: MBF transcription factor complex subunit Cdc10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.3e-09   36.4   0.9     0.0043   17.6   0.0    4.4  3  Ank_4         Ankyrin repeats (many copies)
    4.2e-07   30.5   0.8     0.0057   17.2   0.2    3.2  4  Ank_2         Ankyrin repeats (3 copies)
     0.0017   18.7   3.6       0.81   10.4   0.0    4.3  4  Ank_3         Ankyrin repeat
      0.003   16.9   2.8     0.0075   15.6   2.8    1.6  1  DUF3450       Protein of unknown function (DUF3450)
  ------ inclusion threshold ------
      0.014   16.0   0.2      0.046   14.3   0.2    1.9  1  DUF5600       Domain of unknown function (DUF5600)
      0.018   15.3   0.1       0.27   11.6   0.0    2.9  2  Ank_5         Ankyrin repeats (many copies)
      0.022   15.2   2.9        1.3    9.6   0.0    3.7  3  Ank           Ankyrin repeat
      0.043   13.2   4.6       0.13   11.6   4.6    1.8  1  FAM76         FAM76 protein
       0.13   12.3   1.9       0.32   11.0   1.9    1.6  1  DUF1043       Protein of unknown function (DUF1043)
       0.51    9.7  14.0       0.65    9.3  10.8    2.6  2  GAS           Growth-arrest specific micro-tubule binding
       0.58    9.5   5.1        0.9    8.8   5.1    1.2  1  DUF4407       Domain of unknown function (DUF4407)
        2.2    7.4  12.0        0.4    9.8   7.6    1.9  2  Sec1          Sec1 family
        2.9    8.6   4.6        9.9    6.9   0.9    3.0  3  SlyX          SlyX
        3.2    7.1  10.7          9    5.7   0.1    2.3  2  DUF3552       Domain of unknown function (DUF3552)


Domain annotation for each model (and alignments):
>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.98   1.3e+03      11      27 ..     145     161 ..     137     171 .. 0.81
   2 !   12.3   0.3   0.00015      0.19       3      44 ..     343     383 ..     341     433 .. 0.90
   3 !   17.6   0.0   3.4e-06    0.0043       2      55 .]     412     489 ..     411     489 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.98
       Ank_4  11 sgrlelvrlLlekgadi 27 
                 +g +e++++L++++ d+
  EPX71024.1 145 YGVYEMLQSLISFNLDL 161
                 7889*******998884 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 0.00015
       Ank_4   3 taLhyaaisgrlelvrlLlekgad...inaqdnrsGetalhiAak 44 
                  aLh+aa+  +++l+  L++++a+    n +    Getal + ++
  EPX71024.1 343 AALHWAAALAKMPLLNVLISRKANslrGNLT----GETALMRSVM 383
                 68*****************999995445555....*****99885 PP

  == domain 3  score: 17.6 bits;  conditional E-value: 3.4e-06
       Ank_4   2 ltaLhyaai....sgrlelvrlLlekgad.....................inaqdnrsGetalhiAakrgnveilklLl 55 
                 +t+ h+ +     +gr  ++r+ le+                        +n+q +++G+ta+ iAa++gn+ ++  Ll
  EPX71024.1 412 RTVVHHICLtagiKGRGSAARYYLETLLRwadahatpsngftieefikkyLNYQ-DKNGDTAVNIAARIGNKTVVDILL 489
                 566777777777777777777777775555567777777777778888889***.****************99998776 PP

>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0         8     1e+04      29      48 ..     138     157 ..     119     169 .. 0.71
   2 !    9.4   0.2    0.0012       1.6      24      63 ..     338     384 ..     313     406 .. 0.70
   3 !    9.5   0.3    0.0011       1.5       1      60 [.     345     418 ..     345     440 .. 0.67
   4 !   17.2   0.2   4.5e-06    0.0057      48      81 ..     449     497 ..     388     499 .. 0.61

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 8
       Ank_2  29 aLhyAakngnleivklLleh 48 
                 a+ +A k+g  e+++ L+++
  EPX71024.1 138 AVSTAKKYGVYEMLQSLISF 157
                 66677777777777777764 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.0012
       Ank_2  24 k.ngktaLhyAakngnleivklLleh......adndgrtpLhyAars 63 
                 +  g+ aLh+Aa   +  ++  L++        + +g+t+L+ ++  
  EPX71024.1 338 DeLGHAALHWAAALAKMPLLNVLISRkanslrGNLTGETALMRSVMV 384
                 24789999999998866779999985544543337799999988765 PP

  == domain 3  score: 9.5 bits;  conditional E-value: 0.0011
       Ank_2   1 LhlAakn.gnlelvklLl.egadpn....k.ngktaLhyAak.ngnlei..vklLle..h.....adndgrtpLhyA 60 
                 Lh+Aa   +  +l++ L+  +a  n    + +g+taL+ +++  ++l+      Ll+  +     +d  grt+ h+ 
  EPX71024.1 345 LHWAAALaK-MPLLNVLIsRKA--NslrgNlTGETALMRSVMvTNHLNQssFHELLDllYpslncIDHAGRTVVHHI 418
                 899999635.55******5333..33445489******888854555322356666633244556668899999654 PP

  == domain 4  score: 17.2 bits;  conditional E-value: 4.5e-06
       Ank_2  48 h...............adndgrtpLhyAarsghleivklLlekgadinl 81 
                                 +d++g t+  +Aar g+  +v++Ll+ ga++ +
  EPX71024.1 449 SngftieefikkylnyQDKNGDTAVNIAARIGNKTVVDILLQAGASKSI 497
                 03333333333354447799*********99**********99998765 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.2     0.033        43       3      27 ..     342     365 ..     340     368 .. 0.86
   2 ?    0.2   0.0       1.4   1.8e+03       2      15 ..     374     387 ..     373     405 .. 0.77
   3 ?   -2.2   0.0       8.4   1.1e+04       2      11 ..     411     420 ..     410     442 .. 0.72
   4 !   10.4   0.0   0.00063      0.81       1      27 [.     468     493 ..     468     497 .. 0.91

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.033
       Ank_3   3 etpLhlAarsgnleivkfLlenkga 27 
                   +Lh+Aa  ++ +++  L+  + a
  EPX71024.1 342 HAALHWAAALAKMPLLNVLIS-RKA 365
                 569*****************9.665 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 1.4
       Ank_3   2 GetpLhlAarsgnl 15 
                 Get+L++ ++ +n+
  EPX71024.1 374 GETALMRSVMVTNH 387
                 99****99988776 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 8.4
       Ank_3   2 GetpLhlAar 11 
                 G+t  h+ ++
  EPX71024.1 411 GRTVVHHICL 420
                 7888888886 PP

  == domain 4  score: 10.4 bits;  conditional E-value: 0.00063
       Ank_3   1 nGetpLhlAarsgnleivkfLlenkga 27 
                 nG t+  +Aar gn ++v+ Ll+  ga
  EPX71024.1 468 NGDTAVNIAARIGNKTVVDILLQ-AGA 493
                 799********************.777 PP

>> DUF3450  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   2.8   5.8e-06    0.0075      40     183 ..     563     730 ..     546     739 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 5.8e-06
     DUF3450  40 dklddekqellaeyralkeeleslevyneqlerlvasqeqeiasleeqiee....ieeierelvpllekm.idrLeqfveldlPf.............. 119
                 d+++ +++ + + y +l+e + +l+ ++eql+r+ ++    +++l+++ ++    i+e ++el  l ++    +L + v +d Pf              
  EPX71024.1 563 DEMAAKQSMIDNTYAQLRESTRKLAEFREQLRRSETH-TLMLSELKQRCKNlelsIDEQKNELLALDKNFsSVSLTETVDADAPFvvnskntpsvtelk 660
                 6667777777777788888888887777777765433.3445555555554111134444444444333313468888888888888888888888888 PP

     DUF3450 120 ....lleeRqarlakLkelmdradvslaekyrrvleayq..iEaeYgrtievyqgeleldGeevqvdflr 183
                       e+ +arl+ L e ++r + + + k rrv+ +     E++ ++ +e+  + +e dG++ +vd+ r
  EPX71024.1 661 iriaAYERNEARLNALAETLHRRNANIKSKCRRVVSLCTgvEETKVDSLLESLLQAVESDGQQGEVDMGR 730
                 88866667789************************99874468999********************9755 PP

>> DUF5600  Domain of unknown function (DUF5600)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.2   3.6e-05     0.046       4      61 ..     583     640 ..     580     679 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 3.6e-05
     DUF5600   4 lrklNdlvkRaRlvkvhalllaelrkempsv.fgkekkkkeLieelpeiyekvsrkhnl 61 
                 +rkl ++    R  ++h+l+l+el+++++++ ++ +++k+eL+  l++ + +vs +  +
  EPX71024.1 583 TRKLAEFREQLRRSETHTLMLSELKQRCKNLeLSIDEQKNELL-ALDKNFSSVSLTETV 640
                 79***************************99455555566655.699999999877665 PP

>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.1       1.2   1.6e+03       2      21 ..     361     379 ..     341     388 .. 0.69
   2 ?   11.6   0.0   0.00021      0.27       9      55 ..     462     508 ..     456     508 .. 0.96

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 1.2
       Ank_5   2 lehgpadvnrldgggntpLh 21 
                 +++  a+  r +  g+t+L+
  EPX71024.1 361 ISRK-ANSLRGNLTGETALM 379
                 4444.555666777777777 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 0.00021
       Ank_5   9 vnrldgggntpLhvAakygaadvvrlLlargadlnltdsrGltaldl 55 
                 +n++d++g t+ ++Aa+ g+ +vv +Ll  ga+  + +  Glt++d+
  EPX71024.1 462 LNYQDKNGDTAVNIAARIGNKTVVDILLQAGASKSIPNRAGLTVYDF 508
                 699999999************************************96 PP

>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.3      0.23     3e+02       2      23 ..     341     362 ..     340     370 .. 0.69
   2 ?    1.0   0.1      0.53   6.8e+02       2      11 ..     374     385 ..     373     409 .. 0.63
   3 ?    9.6   0.0     0.001       1.3       1      26 [.     468     494 ..     468     500 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.23
                 SBBHHHHHHHHTTHHHHHHHHT CS
         Ank   2 GnTPLHlAatngkkriiklLLh 23 
                 G+ +LH+Aa  +k   +  L++
  EPX71024.1 341 GHAALHWAAALAKMPLLNVLIS 362
                 6779***995555557776773 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.53
                 SBBHHHHHH..H CS
         Ank   2 GnTPLHlAa..t 11 
                 G T+L++ +  t
  EPX71024.1 374 GETALMRSVmvT 385
                 99****976663 PP

  == domain 3  score: 9.6 bits;  conditional E-value: 0.001
                 TSBBHHHHHHHHTTHHHHHHHH.TTTS CS
         Ank   1 dGnTPLHlAatngkkriiklLL.hGAn 26 
                 +G+T+  +Aa++g+k ++  LL  GA+
  EPX71024.1 468 NGDTAVNIAARIGNKTVVDILLqAGAS 494
                 79********************66997 PP

>> FAM76  FAM76 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   4.6    0.0001      0.13     185     296 ..     522     635 ..     500     639 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.0001
       FAM76 185 rlevskleeeklaeekesnetskksldsnssdhlvav.tqLkeeiaslkkqleqkdqellekdkkitelkaellekeke..lreklkelekeakekiek 280
                 +++vs+++ ek +  ++++++s k + ++++d +  + +++++e+a  + ++++   +l e  +k++e++ +l ++e++  + + lk++ k+ + +i++
  EPX71024.1 522 TVNVSNTNIEKEKFVMPAQQKS-KDIITSVTDVITSLdKDFQDEMAAKQSMIDNTYAQLRESTRKLAEFREQLRRSETHtlMLSELKQRCKNLELSIDE 619
                 3444444422333344444443.346677788888874579******************************9998887633678999999********* PP

       FAM76 281 lekkirellkevaels 296
                  +++  +l k+ +++s
  EPX71024.1 620 QKNELLALDKNFSSVS 635
                 *****99999999876 PP

>> DUF1043  Protein of unknown function (DUF1043)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   1.9   0.00025      0.32      27      93 ..     573     639 ..     554     656 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00025
     DUF1043  27 kklekelekakaeleeqkqeledHfaqsaelLetlaedyqkLyqhlaksseeLlp.eleeqelfqqkk 93 
                 +++ ++l +++ +l+e +++l +  ++   +L++l++++++L   + ++++eLl  +++  ++ ++++
  EPX71024.1 573 DNTYAQLRESTRKLAEFREQLRRS-ETHTLMLSELKQRCKNLELSIDEQKNELLAlDKNFSSVSLTET 639
                 577899**************9885.666679**********************875555444444444 PP

>> GAS  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1       1.1   1.4e+03     139     179 ..     353     393 ..     350     399 .. 0.87
   2 ?    9.3  10.8   0.00051      0.65      42     120 ..     558     636 ..     545     694 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 1.1
         GAS 139 ktglknllLekklkalqeelEkkeaqleevlaaanldpaal 179
                 k+ l n+l+ +k ++l+ +l   +a +++v+ +++l++++ 
  EPX71024.1 353 KMPLLNVLISRKANSLRGNLTGETALMRSVMVTNHLNQSSF 393
                 6667899************************9999998775 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00051
         GAS  42 eernekelseisqenkrlkepLkkaeeeveeLrkqlknyekdkqslknlkarlkelekelkdlkwehevleqrfekvek 120
                 ++  + e+++ ++   +   +L++ +++++e r+ql++ e +   l +lk+r k+le  + + k e   l + f++v+ 
  EPX71024.1 558 DKDFQDEMAAKQSMIDNTYAQLRESTRKLAEFREQLRRSETHTLMLSELKQRCKNLELSIDEQKNELLALDKNFSSVSL 636
                 5567788999999999999*******************************************************99974 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   5.1   0.00071       0.9     118     225 ..     548     686 ..     519     694 .. 0.72

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00071
     DUF4407 118 eeakelkeqlaaaltaelaeleaqiaalqaeidaaearldalraeaqkeldgtkgtgttgvaGkgpaakekkaqldaaqaelaelkakld......... 207
                  +++++ ++l++++++e+a+ ++ i++  a++++  ++l++ r+++++  + t            +++k+ +  +d++++el +l+++ +         
  EPX71024.1 548 TSVTDVITSLDKDFQDEMAAKQSMIDNTYAQLRESTRKLAEFREQLRRSETHTL-----MLSELKQRCKNLELSIDEQKNELLALDKNFSsvsltetvd 641
                 334444555556688888888888888888888888888888887777766644.....35567889*********************99********* PP

     DUF4407 208 ...........................atarlaalraelaeleae 225
                                            ++arl+al ++l + +a+
  EPX71024.1 642 adapfvvnskntpsvtelkiriaayerNEARLNALAETLHRRNAN 686
                 *******99988888886665555555555555555555554444 PP

>> Sec1  Sec1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1       1.1   1.4e+03     504     505 ..     175     196 ..      78     276 .. 0.47
   2 ?    9.8   7.6   0.00031       0.4     276     414 ..     547     716 ..     540     740 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 1.1
                 -....................- CS
        Sec1 504 s....................s 505
                 +                    s
  EPX71024.1 175 DpqeaylsnrlplrnhnhnnlS 196
                 1223333332222222222220 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00031
                 HHHHHHHHHHHHHHHHHHH.HTTT...-..TTHHHHHHHHHH-GGGHHHHHHHHHHHHHHHHHHHHS-H.............................. CS
        Sec1 276 fgevgeklkkeakeyqeen.ekkrngak..esiadlkkfvaklpelqeekkklskHtnlaeellkevkk.............................. 341
                 +++v + +++  k++q e+ + k++  +  ++ a+l++  +kl e++e+ +  ++Ht +++el ++ k+                              
  EPX71024.1 547 ITSVTDVITSLDKDFQDEMaA-KQS--MidNTYAQLRESTRKLAEFREQLRRSETHTLMLSELKQRCKNlelsideqknellaldknfssvsltetvda 642
                 577888999999999999944.443..34479*************************************999999777777777766666666666666 PP

                 ........HH.HHHHHHHHHHHH.SS--.B--..-HHHHHHHH-TTS-H.HHHHHHHHHHHH...-B.-HT--GG....GGH CS
        Sec1 342 ........rkldellelEqdlat.gesdkkikekkvieeliaddeptseledklRLlllyslvegglkekelkellrelvqs 414
                         ++  ++ el   +a+ +  +++   +++ e l +++++   ++ k R ++ ++    g+ e +++ ll++l+q+
  EPX71024.1 643 dapfvvnsKNTPSVTELKIRIAAyE--RNEARLNALAETLHRRNAN---IKSKCRRVVSLCT---GVEETKVDSLLESLLQA 716
                 6666666666666666666666533..2233344455555555555...6667766666666...66566777777777774 PP

>> SlyX  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.9    0.0077       9.9      22      58 ..     561     597 ..     552     605 .. 0.89
   2 ?   -1.0   0.0       2.2   2.8e+03      22      44 ..     606     628 ..     598     642 .. 0.55
   3 ?    1.1   0.0      0.49   6.3e+02       5      46 ..     656     697 ..     654     712 .. 0.76

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0077
                 HHHHHHHHHHHHHHHHHHHHHHHHT-XXXXXXXXXXX CS
        SlyX  22 Lndvvaeqqqqidrlqrqlrllaerlkeleessgase 58 
                  +d++a+ q  id   +qlr+ +++l+e +e+ ++se
  EPX71024.1 561 FQDEMAAKQSMIDNTYAQLRESTRKLAEFREQLRRSE 597
                 57999***********************999987654 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 2.2
                 HHHHHHHHHHHHHHHHHHHHHHH CS
        SlyX  22 Lndvvaeqqqqidrlqrqlrlla 44 
                 L +   + +  id+++ +l +l 
  EPX71024.1 606 LKQRCKNLELSIDEQKNELLALD 628
                 33333344444444444444444 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.49
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT CS
        SlyX   5 leeLEiklafqedtieeLndvvaeqqqqidrlqrqlrllaer 46 
                 ++eL i++a  e+   +Ln+     +++ + ++ ++r+++  
  EPX71024.1 656 VTELKIRIAAYERNEARLNALAETLHRRNANIKSKCRRVVSL 697
                 689999999999998888888877777777777777777655 PP

>> DUF3552  Domain of unknown function (DUF3552)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   7.3     0.069        88      47     129 ..     539     624 ..     513     642 .. 0.76
   2 ?    5.7   0.1     0.007         9      72     114 ..     658     700 ..     651     735 .. 0.75

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.069
     DUF3552  47 AeakkkealleakeeihklreelekelkerrnelqrlekRllqkeetLdrkeeslekkees...leekekelkqkeqsleekeeel 129
                 A++k k +++ + + i  l +++ +e+  +++ +++   +l++   +L +  e+l++ e++   l+e +++ k+ e s++e+++el
  EPX71024.1 539 AQQKSKDIITSVTDVITSLDKDFQDEMAAKQSMIDNTYAQLRESTRKLAEFREQLRRSETHtlmLSELKQRCKNLELSIDEQKNEL 624
                 78889999999999999999999999999999999999999999999999999998888752224455555555555555555554 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.007
     DUF3552  72 elkerrnelqrlekRllqkeetLdrkeeslekkeesleekeke 114
                 elk r +  +r e Rl+   etL r+++++++k +++ +    
  EPX71024.1 658 ELKIRIAAYERNEARLNALAETLHRRNANIKSKCRRVVSLCTG 700
                 88999999999*****************999997776665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (743 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1088  (0.0606838); expected 358.6 (0.02)
Passed bias filter:                      509  (0.0283898); expected 358.6 (0.02)
Passed Vit filter:                        67  (0.00373696); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.76u 0.32s 00:00:01.08 Elapsed: 00:00:00.47
# Mc/sec: 4794.44
//
Query:       EPX71025.1  [L=419]
Description: hypothetical protein SOCG_01246 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (419 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       858  (0.0478554); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.38
# Mc/sec: 3302.32
//
Query:       EPX71026.1  [L=178]
Description: inner membrane peptidase complex catalytic subunit 2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.2e-07   29.3   0.1    1.8e-06   27.8   0.1    1.8  1  Peptidase_S24  Peptidase S24-like
    9.2e-05   22.3   0.0      0.039   13.7   0.0    2.8  2  Peptidase_S26  Signal peptidase, peptidase S26


Domain annotation for each model (and alignments):
>> Peptidase_S24  Peptidase S24-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.1     2e-10   1.8e-06       2      55 ..      42     103 ..      41     114 .. 0.83

  Alignments for each domain:
  == domain 1  score: 27.8 bits;  conditional E-value: 2e-10
                    XXSSTTCCTXXTTXEEEEECTS.......---TTSEEEEEETTCE.-EEEEEEEEETTEEEE CS
  Peptidase_S24   2 vpGdSMeptlldGdlilVdkfs.......epkrGdivvfrlpgee.eayiKrviglpgdrvl 55 
                    ++G SM+ptl++    l +  +       + +rGd+v+ r p+++ ++++Kr+   ++d v+
     EPX71026.1  42 IDGRSMKPTLNPETNFLKRDKVlvwkwnkSFERGDVVILRSPEDPqKLLVKRILAVEDDLVK 103
                    89****88888765555554445666668*****************************9988 PP

>> Peptidase_S26  Signal peptidase, peptidase S26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.4   0.0    0.0017        15      23      66 ..      73     104 ..      62     113 .. 0.67
   2 !   13.7   0.0   4.4e-06     0.039      99     137 ..     114     152 ..     105     153 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0017
  Peptidase_S26  23 evgdlvlvepPeelaalaaergylprgvpllKrVlalagqevcv 66 
                    e+gd+v++++Pe+            ++ +l+Kr+la++++ v++
     EPX71026.1  73 ERGDVVILRSPED------------PQKLLVKRILAVEDDLVKT 104
                    5555555555552............3347888888888888876 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 4.4e-06
  Peptidase_S26  99 vlaegelfllskevadSfDsRYfGpvpassvigvarpvl 137
                     ++eg++++ ++e  +S Ds  fGpv++  +++++ +v+
     EPX71026.1 114 PIPEGHVWVEGDEQFHSIDSNKFGPVSTGLITAKIIAVV 152
                    589*************************99999988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (178 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       254  (0.014167); expected 358.6 (0.02)
Passed bias filter:                      239  (0.0133304); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 1306.76
//
Query:       EPX71027.1  [L=593]
Description: serine/threonine protein kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.4e-27   95.6   0.0    4.2e-27   94.8   0.0    1.4  1  Pan3_PK      Pan3 Pseudokinase domain
    4.6e-07   29.5   0.0    8.2e-07   28.6   0.0    1.3  1  Pkinase      Protein kinase domain
     0.0013   18.1   0.0     0.0022   17.4   0.0    1.3  1  Pkinase_Tyr  Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> Pan3_PK  Pan3 Pseudokinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.8   0.0     7e-31   4.2e-27       1     136 [.     453     588 ..     453     589 .. 0.93

  Alignments for each domain:
  == domain 1  score: 94.8 bits;  conditional E-value: 7e-31
     Pan3_PK   1 ieellkaiaerlleeldsaleesdlleselskelengrlvrlllklgfinerpefek.dkkwsetgdryllkLFrdyvFhqvdeegkpvldlahvlscL 98 
                 i+++++ +a+++l  +d++  e+ ++e++l++ ++  r +++l kl++i++ ++  +  + + +  + yll+L rdy+Fhqvdee  p++dl +vl++L
  EPX71027.1 453 IDSFFRDYAAHFLPVMDASFLENAAMERRLAQTIQHKRFFQILYKLMYITDCNDRPAvLPGFRD-RKIYLLHLLRDYLFHQVDEEQCPLIDLCQVLTTL 550
                 6789999******************************************996655440566666.789******************************* PP

     Pan3_PK  99 nklDagveekilLvsrdeqsvlvvsYkelkkllesafe 136
                  klDag+ + + L+srde  +  v+Y elk +l+ +fe
  EPX71027.1 551 GKLDAGIGQSVALISRDELDCASVTYSELKAWLDDVFE 588
                 **********************************9996 PP

>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.6   0.0   1.4e-10   8.2e-07      49     146 ..     272     388 ..     263     402 .. 0.82

  Alignments for each domain:
  == domain 1  score: 28.6 bits;  conditional E-value: 1.4e-10
                 HHHHHHHSCTTB--EEEEEEE....SSEEEEEEE--TTEB.....HHHHHH.......HHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEE CS
     Pkinase  49 ikilkklkhpnivrlyevfee....kdelylvleyvegge.....ladlle.......rkgslseeeakkiakqilegleylHskgiiHrDlKpeNiLi 131
                 +k l+++ hpniv++y+ f++    +++l+lv +y +  +     ++d ++       ++ + +e+e+ +++ q++ ++++lH++g+    l p+ iL+
  EPX71027.1 272 VKCLQRIFHPNIVTFYSGFNSdtfnDQSLILVYDYHPRCStltemYFDGISavdksqtERIMPNEKELWNYMFQMAIAISHLHKNGLACNHLTPSRILV 370
                 67899999***********999999999*******9877765555444444777776455556788********************************* PP

                 ETTTEEEE...-SGTTSE CS
     Pkinase 132 dekgelKi...tDFGlak 146
                 ++++ ++i   +D+ la 
  EPX71027.1 371 NREKRIRInscADYELAV 388
                 *99999984445666665 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   3.6e-07    0.0022      51     150 ..     271     387 ..     267     404 .. 0.84

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 3.6e-07
                  HHHHHHTS-BTTB--EEEEEE....SSSSEEEEEE--TTEBHHHHHHHT..........CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGE CS
  Pkinase_Tyr  51 eakimkklkhpnivkllgvct....keepllivteyvkgGdLlkfLrkk..........ekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNv 134
                   +k+++++ hpniv ++        ++++l++v +y +  + l+ +  +          e+   + k+l ++++q+A ++++L+++ l    l+   +
   EPX71027.1 271 TVKCLQRIFHPNIVTFYSGFNsdtfNDQSLILVYDYHPRCSTLTEMYFDgisavdksqtERIMPNEKELWNYMFQMAIAISHLHKNGLACNHLTPSRI 368
                  68999***********9877668788999********9997777666667999999976666678899****************************** PP

                  EEEETTEEEE...-STTTH CS
  Pkinase_Tyr 135 Llsenkvvki...sDfGLa 150
                  L++++k ++i   +D+ La
   EPX71027.1 369 LVNREKRIRInscADYELA 387
                  ********99444566555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (593 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       410  (0.022868); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 4122.41
//
Query:       EPX71028.1  [L=993]
Description: hypothetical protein SOCG_01249 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.7e-21   74.8   3.3    2.1e-20   72.4   3.3    2.4  1  INCENP_ARK-bind  Inner centromere protein, ARK binding region


Domain annotation for each model (and alignments):
>> INCENP_ARK-bind  Inner centromere protein, ARK binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.4   3.3   1.2e-24   2.1e-20       1      55 []     896     953 ..     896     953 .. 0.91

  Alignments for each domain:
  == domain 1  score: 72.4 bits;  conditional E-value: 1.2e-24
  INCENP_ARK-bind   1 dinsDdedddede...prkkipsWAqspeLrqaLikqepiDpdeiFGpikplnleeiF 55 
                      di+sD+ d+++de   ++ ++psWA+speLr++L++q+++Dpd+iFG+ikpl+++e F
       EPX71028.1 896 DIDSDYLDESDDEerkKKINLPSWAESPELREQLKRQQKWDPDKIFGSIKPLHMDELF 953
                      78888877777776678999************************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (993 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1355  (0.0755759); expected 358.6 (0.02)
Passed bias filter:                      320  (0.0178482); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.73u 0.28s 00:00:01.01 Elapsed: 00:00:00.42
# Mc/sec: 7124.34
//
Query:       EPX71029.1  [L=410]
Description: eukaryotic protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-80  271.9   6.2    1.4e-78  265.0   6.2    2.7  1  Exo5      Exonuclease V - a 5' deoxyribonuclease
    0.00046   20.2   0.0     0.0071   16.3   0.0    2.5  2  PDDEXK_1  PD-(D/E)XK nuclease superfamily
  ------ inclusion threshold ------
      0.013   15.4   0.0      0.026   14.4   0.0    1.5  1  HlyD_D4   Long alpha hairpin domain of cation efflux system p
       0.12   12.5   1.8         11    6.1   0.0    2.8  3  Cas_Cas4  Domain of unknown function DUF83


Domain annotation for each model (and alignments):
>> Exo5  Exonuclease V - a 5' deoxyribonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  265.0   6.2   3.1e-82   1.4e-78       5     367 ..      68     398 ..      65     399 .. 0.89

  Alignments for each domain:
  == domain 1  score: 265.0 bits;  conditional E-value: 3.1e-82
        Exo5   5 rfrkkpkkklsVtdLvspaWCElqyeYtLtklgrkkrtkamkrGskvHkklEeevh...ttvevevttkedkwglriwnviqgLrtLretGltRElevw 100
                  frk+ + +l+VtdLvsp+WCE+q+eY+Ltk + kk++++m++Gs+vH++lE+e++   +++ ++ ++ke+ w+l+i+++i+gL++L  +G+tRE+++w
  EPX71029.1  68 LFRKR-RGYLNVTDLVSPLWCEVQQEYYLTK-NLKKTSPQMTKGSSVHQHLEYETTpptDRILLDKASKEEPWALKILKQIEGLHQLSMNGITREFPIW 164
                 69997.9************************.9**********************555599999*********************************** PP

        Exo5 101 GlvdgelvnGvIDelslenpdeeleeellesrkkksadvekkkaalseeqesikdylessskkkrkiyitDvKTrgskslpsssqvrptkiQlmlYrrl 199
                 G+++++l++G+IDe+sl ++ +                        s+e+++i+dy+++     ++iy+tD+KTr s++ ps sqv ++kiQ+m+Y +l
  EPX71029.1 165 GFYKDSLIMGIIDEISLGQQGK-----------------------ASNEHKDIRDYWHP---AAKDIYFTDNKTRFSNTRPSDSQVYQSKIQVMYYAHL 237
                 *******************977.......................2456789*****87...8899********************************* PP

        Exo5 200 Lselaadkld.......................iesvferydldpdepfsdaflaq.igkledevfeeldseaeseseeeeeveassssqdslsellky 274
                 + +++  +l+                       ++s+f+ ++ld ++++ ++fl+q i+++                                +e+ ++
  EPX71029.1 238 FLHYFP-SLNlqstkplyvkpnelnketertswFSSFFKCLNLDGHKDLGEKFLEQsIRTIPT---------------------------IPEDEFRNN 308
                 *****8.55544777777778888888888888888888888888888888888886666663...........................122566778 PP

        Exo5 275 ntLssllkl...lkkelaltflegasslsklltveYrsrkegevlgsksflvdeetLkeylaeelawWrgeReaegVeieeafkCrsCeFaeeCeW 367
                 n+L  l+kl   + ++l+l++       +++l + Y++ +++++l++++f  ++ +L++++++e ++Wr+ Re+ gV+++e+fkCrsCeF++eC+W
  EPX71029.1 309 NSLDGLYKLcskISRRLRLNI------SDQNLGIAYWNPQSQQLLYVEKFDHEPIVLENCYNRENSFWRTMREPIGVPPNEVFKCRSCEFRDECWW 398
                 888888888555668888888......89******************************************************************* PP

>> PDDEXK_1  PD-(D/E)XK nuclease superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0     0.098   4.4e+02      24      54 ..     100     124 ..      77     184 .. 0.70
   2 !   16.3   0.0   1.6e-06    0.0071     143     254 ..     204     396 ..     193     397 .. 0.69

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.098
    PDDEXK_1  24 glreeeeleapdlGtlvHaaleefyewkkld 54 
                 + ++++++   + G+ vH+ le  ye+++++
  EPX71029.1 100 K-KTSPQM---TKGSSVHQHLE--YETTPPT 124
                 2.224444...55999999998..5522222 PP

  == domain 2  score: 16.3 bits;  conditional E-value: 1.6e-06
    PDDEXK_1 143 elriiDyKtgsappkskelaelkegl.QlllYllalaegeelkeegepagalylrleepkvk..................................... 203
                 +++  D Kt  ++ +++++++++++  Q++ Y+ + ++    ++ +   + ly++ +e +++                                     
  EPX71029.1 204 DIYFTDNKTRFSN-TRPSDSQVYQSKiQVMYYAHLFLHYFPSLNLQ-STKPLYVKPNELNKEtertswfssffkclnldghkdlgekfleqsirtipti 300
                 58889***87777.5555566666666************6655554.9********7744446899999999999999998888877777777777777 PP

    PDDEXK_1 204 .......................................deevvkkm.......alteeeleallqeleel....aeeilag.efparpskkCeyCpyk 251
                                                        +              +++ ++   +l+ + ++    ++ ++++  +p+++  kC++C+++
  EPX71029.1 301 pedefrnnnsldglyklcskisrrlrlnisdqnlgiaywN------PqsqqllyVEKFDHEPIVLENCYNRensfWRTMREPiGVPPNEVFKCRSCEFR 393
                 7766666666666666666666666666665555555553......04444444233333333444443334666*****999999999999******* PP

    PDDEXK_1 252 svC 254
                 + C
  EPX71029.1 394 DEC 396
                 988 PP

>> HlyD_D4  Long alpha hairpin domain of cation efflux system protein, CusB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   5.9e-06     0.026       2      26 ..      79     103 ..      78     111 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 5.9e-06
                 EEEE-TTHHHHHHHHHHHHHTT--H CS
     HlyD_D4   2 adLliPeWvaaQeEYLalkelgdla 26 
                  dL+ P W ++Q+EY + k+l+++ 
  EPX71029.1  79 TDLVSPLWCEVQQEYYLTKNLKKTS 103
                 59999***************98764 PP

>> Cas_Cas4  Domain of unknown function DUF83
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0      0.86   3.9e+03      33     120 ..     108     131 ..      82     153 .. 0.48
   2 ?    6.1   0.0    0.0024        11      54      92 ..     200     237 ..     174     246 .. 0.78
   3 ?    4.7   0.2    0.0067        30     146     161 ..     382     397 ..     353     398 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.86
    Cas_Cas4  33 lGkllheesyerekkevelsesikiDvvekekeklvvvEvKkskkkeeaaklQllyYlllLekkgveikeGvleypkekkreevelte 120
                  G  +h+                                                                 ley ++  + ++ l++
  EPX71029.1 108 KGSSVHQ----------------------------------------------------------------HLEYETTPPTDRILLDK 131
                 3333333................................................................24444444444444444 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0024
    Cas_Cas4  54 sikiDvvekekeklvvvEvKkskkkeeaaklQllyYlll 92 
                  ++ D+   +++k++  +++ s+++ +++k+Q++yY+ l
  EPX71029.1 200 PAAKDIYF-TDNKTRFSNTRPSDSQVYQSKIQVMYYAHL 237
                 56667777.78999999*******************976 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.0067
    Cas_Cas4 146 kkkkiCkkCayaelCl 161
                 ++  +C++C++++ C+
  EPX71029.1 382 NEVFKCRSCEFRDECW 397
                 45558**********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (410 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       716  (0.0399353); expected 358.6 (0.02)
Passed bias filter:                      502  (0.0279993); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.29s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 2965.00
//
Query:       EPX71030.1  [L=457]
Description: hypothetical protein SOCG_01251 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (457 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       525  (0.0292822); expected 358.6 (0.02)
Passed bias filter:                      265  (0.0147805); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 3154.41
//
Query:       EPX71031.1  [L=173]
Description: acireductone dioxygenase family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.8e-48  163.0   0.1    6.8e-48  162.8   0.1    1.0  1  ARD           ARD/ARD' family
    2.4e-09   36.8   0.0    4.1e-09   36.0   0.0    1.3  1  Cupin_2       Cupin domain
    4.5e-06   26.6   0.0    6.8e-06   26.0   0.0    1.3  1  AraC_binding  AraC-like ligand binding domain
  ------ inclusion threshold ------
      0.038   13.6   0.0      0.049   13.2   0.0    1.2  1  Cupin_1       Cupin
       0.14   11.9   0.0       0.19   11.4   0.0    1.3  1  Cupin_8       Cupin-like domain


Domain annotation for each model (and alignments):
>> ARD  ARD/ARD' family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  162.8   0.1   1.9e-51   6.8e-48       1     157 []       2     151 ..       2     151 .. 0.94

  Alignments for each domain:
  == domain 1  score: 162.8 bits;  conditional E-value: 1.9e-51
         ARD   1 riyimddseegderlphhtspkekaeelelaklgvlrwkldaddeeeaeeeekilktkeeekkdidvevlkestpnfdeklekFfeEhlhedeeirliv 99 
                 r+y ++d++  d+r p+++ ++  ++e +la   v + + d d  e a+e+++ + +k ++++ +   ++ +  ++++ +++kFfeEhlhedeeirli+
  EPX71031.1   2 RAYLFQDEG--DQRMPNDSGIP--ITEAQLAAAKVISSHSDGDLYEFADELMTKYGFKSRDEVSV---SRVKLGERYNSMVQKFFEEHLHEDEEIRLIM 93 
                 578889888..9********76..67777777777799************************999...466899************************* PP

         ARD 100 eGtgyFdvrskdeawirvlvekGDLivlPagiyhrFtltednkvkalRlFvekekwva 157
                 +G gyFd+rs d++wir+lvekGDLi+lPagiyhrFt+ +d++++a+RlF+e++kw+a
  EPX71031.1  94 DGRGYFDLRSVDDKWIRILVEKGDLIILPAGIYHRFTTASDDYIHAMRLFRENPKWIA 151
                 ********************************************************96 PP

>> Cupin_2  Cupin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.0   0.0   1.1e-12   4.1e-09      11      63 ..      79     135 ..      74     142 .. 0.86

  Alignments for each domain:
  == domain 1  score: 36.0 bits;  conditional E-value: 1.1e-12
                 EEEECSSSEEEEEEEEESE..EEEE.ECTE..EEEEETTEEEEE-TT-EEEEEE-SSS CS
     Cupin_2  11 apshrHpgedeffyVleGe..gelt.vdge..eveleaGdsvyfpagtpHrfrNtgde 63 
                 +++h H++e e++ + +G+  + l+ vd++  ++ +e+Gd+++ pag  Hrf  ++d+
  EPX71031.1  79 FEEHLHEDE-EIRLIMDGRgyFDLRsVDDKwiRILVEKGDLIILPAGIYHRFTTASDD 135
                 689******.*********4445566778899999*****************999987 PP

>> AraC_binding  AraC-like ligand binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.0   1.9e-09   6.8e-06      14      67 ..      77     135 ..      67     149 .. 0.85

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 1.9e-09
                   -SEEEETT-SEEEEEEEEE-EEEEETTEE.....EEE-TT-EEEE-TTS-EEEEE-TTS CS
  AraC_binding  14 hsfpphvhdeyvihyvteGtgrlrlngrt.....ydlgpGdlfLlppgepHdyesdsed 67 
                     f++h h+  +i ++++G+g++ l+          +++Gdl++lp g  H++  +s+d
    EPX71031.1  77 KFFEEHLHEDEEIRLIMDGRGYFDLRSVDdkwirILVEKGDLIILPAGIYHRFTTASDD 135
                   45699******************88776666699********************99976 PP

>> Cupin_1  Cupin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.4e-05     0.049      49     100 ..      82     130 ..      52     150 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.4e-05
                 EEESSS-EEEEEEESEEEEEEEETTSS.EEEEEE.EETTEEEEE-TT-EEEEE CS
     Cupin_1  49 hyhpnateiayvlqGegrvgfvvpgngnrdfhkk.lreGdvfvvPaglvhfqy 100
                 h h   +ei  +++G+g++ + + ++   +  +  +++Gd++++Pag+ h + 
  EPX71031.1  82 HLH-EDEEIRLIMDGRGYFDLRSVDD---KWIRIlVEKGDLIILPAGIYHRFT 130
                 888.899***********77777776...444446*************99654 PP

>> Cupin_8  Cupin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   5.4e-05      0.19     203     239 ..      99     136 ..      40     147 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 5.4e-05
     Cupin_8 203 prlkda.kkalevtlnaGevLylPalWfHeVkslaeep 239
                   l+++  k +++ +++G+ + lPa+ +H+ ++ +++ 
  EPX71031.1  99 FDLRSVdDKWIRILVEKGDLIILPAGIYHRFTTASDDY 136
                 556666678999******************99874443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       431  (0.0240393); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.43
# Mc/sec: 1203.39
//
Query:       EPX71032.1  [L=184]
Description: peptide release factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.7e-21   76.3   7.5    2.9e-21   75.6   7.5    1.3  1  RF-1           RF-1 domain
  ------ inclusion threshold ------
       0.13   11.6   0.3       0.19   11.1   0.3    1.2  1  AAL_decarboxy  Alpha-acetolactate decarboxylase


Domain annotation for each model (and alignments):
>> RF-1  RF-1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.6   7.5   3.2e-25   2.9e-21       6     111 ..      68     170 ..      64     175 .. 0.75

  Alignments for each domain:
  == domain 1  score: 75.6 bits;  conditional E-value: 3.2e-25
                 E--GGGEEEEEE---SSSSSSGCSSSCEEEEEETTTTEEEEEEECSSSHHHHHHHHHHHHHHHHHH.HHHHHCCCCCHTTTTT-.S.-S---S--ECEE CS
        RF-1   6 eidekdleidtfrssGaGGQnVNktesaVrlthlptgvivvecqeeRsqekNrekAlerLkaklke.keleeekeeekkrrvkkekkkigtgssekiRt 103
                 +i+e+d+e  ++r sG+GGQ++Nkt+   +l hlptg i+v+cqe+Rs+e+Nr+ A++rL++k+ e ++ e++  + ++++v + kk  +  +++ +R+
  EPX71032.1  68 KINEEDIEELFVRGSGPGGQKINKTSIVSQLKHLPTG-ITVRCQETRSREQNRKIARKRLAEKVDEfRHGENSLLSLRAQKVIQ-KK--RNRQKKSRRK 162
                 79***********************************.8*************************77422222222333333222.22..1222567788 PP

                 EECGCTTE CS
        RF-1 104 ynkkpqsr 111
                 y  + +++
  EPX71032.1 163 YGRQTEGQ 170
                 77766555 PP

>> AAL_decarboxy  Alpha-acetolactate decarboxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.3   2.1e-05      0.19      58     141 ..      92     175 ..      85     183 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 2.1e-05
  AAL_decarboxy  58 vrevddeektPFavvtkfepektvklkealskeeleealeellpskNlfyairidGtfksvkvRsvpkqekpyeplaevakkqs 141
                    ++ v++ +++P  +  + +++++++ ++++ ++ l+e+++e  + +N ++++r +  +++ + R  + ++k +++     ++qs
     EPX71032.1  92 TSIVSQLKHLPTGITVRCQETRSREQNRKIARKRLAEKVDEFRHGENSLLSLRAQKVIQKKRNRQKKSRRKYGRQTEGQQSDQS 175
                    55667777899999999**********99***************************9999999888877776665555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1346  (0.0750739); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.28s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1298.02
//
Query:       EPX71033.1  [L=120]
Description: centromere-specific histone H3 CENP-A [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-42  145.3   0.3    1.3e-42  145.3   0.3    1.0  1  Histone          Core histone H2A/H2B/H3/H4
    0.00034   20.7   0.0    0.00045   20.3   0.0    1.3  1  CENP-T_C         Centromere kinetochore component CENP-T hist
     0.0023   18.2   0.9     0.0062   16.8   0.9    1.8  1  CBFD_NFYB_HMF    Histone-like transcription factor (CBF/NF-Y)
     0.0047   17.3   0.2     0.0075   16.6   0.2    1.3  1  CENP-S           CENP-S protein
  ------ inclusion threshold ------
      0.084   12.7   0.1        4.7    7.1   0.1    2.3  2  Antimicrobial12  Pleurocidin family


Domain annotation for each model (and alignments):
>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.3   0.3   3.6e-46   1.3e-42      36     131 .]      17     118 ..       1     118 [. 0.95

  Alignments for each domain:
  == domain 1  score: 145.3 bits;  conditional E-value: 3.6e-46
                 --TTT-XTTHHHHHHHHHHHHXXSXXSXHHHHHHHHHHHH.......TTSSSXEEXHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTXSEEXHHHHHHHH CS
     Histone  36 kkkrryrpgtvalkeirkyqkstdlliqklpfaRvvreivk......sekedlrisaeavlalqealEallvelfeeAnllakhaKRvTitpkDiqlAr 128
                  +++ryrpgt+al+eirkyq+ tdlliq+lpf+R+vrei +      s++ +lr++++a+++lqea+Ea+lv+lfe++nl+a+haKRvTi+++D+qlAr
  EPX71033.1  17 PRRKRYRPGTMALREIRKYQRTTDLLIQRLPFSRIVREISSefvanfSTDVGLRWQSTALQCLQEAAEAFLVHLFEDTNLCAIHAKRVTIMQRDMQLAR 115
                 4799*********************************************************************************************** PP

                 HHT CS
     Histone 129 rlr 131
                 r+r
  EPX71033.1 116 RIR 118
                 *97 PP

>> CENP-T_C  Centromere kinetochore component CENP-T histone fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   1.3e-07   0.00045      12      72 ..      51     113 ..      29     119 .. 0.81

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 1.3e-07
    CENP-T_C  12 vvkklakrfakasg..skaklekealkalekasdkffeqvgeDLeayakHagRKtidesDvil 72 
                 +v+ ++++f  + +     + +  al+ l++a + f+  + eD +  a Ha+R ti + D+ l
  EPX71033.1  51 IVREISSEFVANFStdVGLRWQSTALQCLQEAAEAFLVHLFEDTNLCAIHAKRVTIMQRDMQL 113
                 5666777776655522445667899***********************************964 PP

>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.9   1.7e-06    0.0062      23      64 ..      73     114 ..      44     114 .. 0.92

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 1.7e-06
                    HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHH CS
  CBFD_NFYB_HMF  23 kdAkeliaecveefieelaseAaeickkekrKtikaehiklA 64 
                    + A ++++e++e f+ +l + ++  + ++kr ti++ +++lA
     EPX71033.1  73 STALQCLQEAAEAFLVHLFEDTNLCAIHAKRVTIMQRDMQLA 114
                    5699***********************************998 PP

>> CENP-S  CENP-S protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.2   2.1e-06    0.0075      20      71 ..      65     116 ..      48     118 .. 0.79

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 2.1e-06
      CENP-S  20 aekeveatkqfiaaltelvykqlenlakDLeaFakHAkRstittdDvlLlaR 71 
                 ++ +++  +++++ l e   + l +l +D ++ a HAkR ti + D+ L  R
  EPX71033.1  65 TDVGLRWQSTALQCLQEAAEAFLVHLFEDTNLCAIHAKRVTIMQRDMQLARR 116
                 4555556677788899999999999**********************99766 PP

>> Antimicrobial12  Pleurocidin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.1    0.0013       4.7      15      21 ..       6      12 ..       5      16 .. 0.90
   2 ?    3.5   0.0     0.017        61      18      29 ..      81      92 ..      78     105 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0013
                     XXXXXXX CS
  Antimicrobial12 15 LMAEPGe 21
                     LMAEPG+
       EPX71033.1  6 LMAEPGD 12
                     9*****9 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.017
                     XXXXX-HHHHHH CS
  Antimicrobial12 18 EPGeaFlghlik 29
                     E  eaFl hl+ 
       EPX71033.1 81 EAAEAFLVHLFE 92
                     6679******96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       432  (0.024095); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.37u 0.22s 00:00:00.59 Elapsed: 00:00:00.37
# Mc/sec: 972.66
//
Query:       EPX71034.1  [L=112]
Description: hypothetical protein SOCG_01256 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.2e-22   77.7   1.8      7e-22   77.3   1.8    1.2  1  SPC12     Microsomal signal peptidase 12 kDa subunit (SPC12)


Domain annotation for each model (and alignments):
>> SPC12  Microsomal signal peptidase 12 kDa subunit (SPC12)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.3   1.8   3.9e-26     7e-22       1      70 [.      42     111 ..      42     112 .] 0.98

  Alignments for each domain:
  == domain 1  score: 77.3 bits;  conditional E-value: 3.9e-26
       SPC12   1 iDFeGQklaekllqvilvlsaviafivGyitqdlkltlyillagvvltllvvvPpWpfYnrnplkWlkpk 70 
                 iDF+GQ l+ k+++++ v+s+v+a+i+G+++qd  l + ++++  ++t ++++P+Wp+Yn++pl+++k k
  EPX71034.1  42 IDFHGQILCSKYMNYATVISGVAAYIAGWLAQDSFLSIKVFVVLSIITGIICIPAWPMYNQKPLQFQKTK 111
                 9******************************************************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       637  (0.035529); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.28s 00:00:00.66 Elapsed: 00:00:00.42
# Mc/sec: 797.02
//
Query:       EPX71035.1  [L=114]
Description: RNase P subunit Rpr2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-22   78.9   7.1    3.6e-22   78.5   7.1    1.2  1  Rpr2      RNAse P Rpr2/Rpp21/SNM1 subunit domain
  ------ inclusion threshold ------
       0.82    9.4   5.4        3.7    7.3   0.1    2.6  2  zf-RRN7   Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn


Domain annotation for each model (and alignments):
>> Rpr2  RNAse P Rpr2/Rpp21/SNM1 subunit domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.5   7.1     4e-26   3.6e-22       1      90 []      11      97 ..      11      97 .. 0.91

  Alignments for each domain:
  == domain 1  score: 78.5 bits;  conditional E-value: 4e-26
                HHHHHHHHHH..HHHHH-HHHHHHHHHHHHHHHHHCT---SSTCCCTB-TTT--B--CTTTEEEEEE-SSS-E.........EEEEETTTT CS
        Rpr2  1 rlnfLyqaahl.qlaeaspalsrylakqlrevskkaqlrlppsvkrtvCkkCgsvlipgvtcsvrvenkskkkkkkkkkadvlvvtClaCg 90
                r+++Lyqaah+  ++++  + s+++++++++vs+k++lrl+p++krt+CkkC+++++ g tcsvr+e++sk+    k++ d+  + C++Cg
  EPX71035.1 11 RISYLYQAAHYlLQHTEEAKFSKHYISTAKQVSQKSVLRLHPNIKRTICKKCNCLMVIGKTCSVRTEEPSKR----KPECDRSLWVCNECG 97
                89********95456777899*********************************************998764....67778888******7 PP

>> zf-RRN7  Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   1.2     0.006        54       3      12 ..      55      64 ..      53      68 .. 0.81
   2 ?    7.3   0.1   0.00042       3.7      21      29 ..      90      98 ..      90     100 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.006
     zf-RRN7  3 kgppCgvCgc 12
                k+ +C  C+c
  EPX71035.1 55 KRTICKKCNC 64
                6778999999 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.00042
     zf-RRN7 21 fyyCrrCht 29
                +++C++C+t
  EPX71035.1 90 LWVCNECGT 98
                59******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       987  (0.0550505); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 880.96
//
Query:       EPX71036.1  [L=300]
Description: 3-hydroxyacyl-ACP dehydratase Htd2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (300 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       406  (0.0226449); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.21s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 2341.70
//
Query:       EPX71037.1  [L=652]
Description: transcription factor Rsv2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.2e-07   30.9   7.6     0.0022   18.4   2.5    2.5  2  zf-C2H2    Zinc finger, C2H2 type
    0.00032   21.3   4.4       0.12   13.3   2.1    2.6  2  zf-C2H2_4  C2H2-type zinc finger
  ------ inclusion threshold ------
      0.049   13.9   1.5      0.078   13.3   1.5    1.3  1  zf-Di19    Drought induced 19 protein (Di19), zinc-binding
        5.1    7.7   5.6        9.9    6.8   0.7    2.7  2  zf-H2C2_2  Zinc-finger double domain


Domain annotation for each model (and alignments):
>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.2   5.4e-06     0.024       5      23 .]     599     618 ..     588     618 .. 0.91
   2 !   18.4   2.5   4.8e-07    0.0022       1      23 []     625     650 ..     625     650 .. 0.98

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 5.4e-06
                 TTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   5 dCgksFkrksnLkrHirt.H 23 
                  C+ +F+r ++L rH+ t H
  EPX71037.1 599 TCNTVFSRTYDLIRHQDTiH 618
                 7***************9999 PP

  == domain 2  score: 18.4 bits;  conditional E-value: 4.8e-07
                 EEETTTT..EEESSHHHHHHHHHC.C CS
     zf-C2H2   1 ykCpdCg..ksFkrksnLkrHirt.H 23 
                 ++C++Cg  + F+r + L+rH+r+ H
  EPX71037.1 625 FRCEICGdqRHFSRHDALVRHLRVkH 650
                 89*********************999 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.0    0.0018       8.1       6      24 .]     600     618 ..     596     618 .. 0.91
   2 !   13.3   2.1   2.7e-05      0.12       1      24 []     625     650 ..     625     650 .. 0.96

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0018
   zf-C2H2_4   6 CgksFsskkaLlrHlkthH 24 
                 C+++Fs+ ++L rH  t H
  EPX71037.1 600 CNTVFSRTYDLIRHQDTIH 618
                 **************98877 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 2.7e-05
   zf-C2H2_4   1 fkCpiC..gksFsskkaLlrHlkthH 24 
                 f+C+iC  ++ Fs+++aL rHl+  H
  EPX71037.1 625 FRCEICgdQRHFSRHDALVRHLRVKH 650
                 89*********************988 PP

>> zf-Di19  Drought induced 19 protein (Di19), zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   1.5   1.7e-05     0.078      14      54 .]     607     651 ..     599     651 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.7e-05
     zf-Di19  14 vkeLveHvedeHrveskevvCPvCaek....vtkdlvaHltleha 54 
                 +  L++H ++ H +++    C +C ++      + lv+Hl+++h+
  EPX71037.1 607 TYDLIRHQDTIHAKTRPVFRCEICGDQrhfsRHDALVRHLRVKHG 651
                 568*********************966565344689*******96 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.7    0.0022       9.9       2      22 ..     610     632 ..     609     639 .. 0.89
   2 ?    2.6   0.4     0.046     2e+02       1      10 [.     641     650 ..     641     652 .] 0.78

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0022
   zf-H2C2_2   2 LrrHirk.Htgekp.yeCplCdk 22 
                 L rH+ + H + +p + C+ C++
  EPX71037.1 610 LIRHQDTiHAKTRPvFRCEICGD 632
                 88***977*************85 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.046
   zf-H2C2_2   1 nLrrHirkHt 10 
                 +L+rH+r+ +
  EPX71037.1 641 ALVRHLRVKH 650
                 79*****744 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (652 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       702  (0.0391544); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.42
# Mc/sec: 4607.28
//
Query:       EPX71038.1  [L=103]
Description: histone H4 h4.2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-08   35.0   0.1    1.5e-08   34.7   0.1    1.2  1  CENP-T_C       Centromere kinetochore component CENP-T histon
      1e-05   25.7   0.1    1.7e-05   25.0   0.0    1.5  1  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a
      5e-05   23.4   0.1    6.7e-05   23.0   0.1    1.2  1  TAF            TATA box binding protein associated factor (TA
    5.6e-05   23.5   0.2    6.4e-05   23.3   0.2    1.2  1  Histone        Core histone H2A/H2B/H3/H4
     0.0002   21.7   0.1    0.00028   21.2   0.1    1.4  1  CENP-S         CENP-S protein
  ------ inclusion threshold ------
      0.015   15.4   0.0      0.017   15.2   0.0    1.1  1  TFIID-31kDa    Transcription initiation factor IID, 31kD subu
      0.063   13.3   0.0      0.087   12.8   0.0    1.3  1  Bromo_TP       Bromodomain associated
       0.13   12.8   0.0       0.25   11.9   0.0    1.4  1  TFIID_20kDa    Transcription initiation factor TFIID subunit 


Domain annotation for each model (and alignments):
>> CENP-T_C  Centromere kinetochore component CENP-T histone fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.7   0.1   6.9e-12   1.5e-08      16      79 ..      33      96 ..      18      99 .. 0.85

  Alignments for each domain:
  == domain 1  score: 34.7 bits;  conditional E-value: 6.9e-12
    CENP-T_C 16 lakrfakasgskaklekealkalekasdkffeqvgeDLeayakHagRKtidesDvilLmkrqrk 79
                 a r   ++g  +++++  ++    +++ f+e v +D  +y++Ha+RKt+ + Dv+  +krq++
  EPX71038.1 33 PAIRRLARRGGVKRISALVYEETRAVLKLFLESVIRDAVTYTEHAKRKTVTSLDVVYSLKRQGR 96
                4444444456777999999999****************************************86 PP

>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.0   7.7e-09   1.7e-05       7      61 ..      34      87 ..      28      91 .. 0.93

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 7.7e-09
                   HHHHHHHCCTTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHH CS
  CBFD_NFYB_HMF  7 rvkkImksdpdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehi 61
                   +++++ +   ++++i+  + e    ++++f+e++ + A+ +++++krKt++  ++
     EPX71038.1 34 AIRRLARRG-GVKRISALVYEETRAVLKLFLESVIRDAVTYTEHAKRKTVTSLDV 87
                   688999999.99***************************************9998 PP

>> TAF  TATA box binding protein associated factor (TAF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.1     3e-08   6.7e-05       4      66 .]      30      92 ..      27      92 .. 0.91

  Alignments for each domain:
  == domain 1  score: 23.0 bits;  conditional E-value: 3e-08
                --HHHHHHHHHHTT---B-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SSB-HHHHHHHH- CS
         TAF  4 lpkesvkviAeslGitnLsdeaaalLaedveyrlkeivqeaakfmrhskRqkLtvaDvdsALr 66
                ++k +++ +A   G++ +s+ + ++    ++  l  ++++a+ +++h+kR++ t+ Dv ++L+
  EPX71038.1 30 ITKPAIRRLARRGGVKRISALVYEETRAVLKLFLESVIRDAVTYTEHAKRKTVTSLDVVYSLK 92
                577789999999999999999999999999999*************************99997 PP

>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.2   2.9e-08   6.4e-05      77     125 ..      40      88 ..      16      94 .. 0.86

  Alignments for each domain:
  == domain 1  score: 23.3 bits;  conditional E-value: 2.9e-08
                 TTSSSXEEXHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTXSEEXHHHHH CS
     Histone  77 sekedlrisaeavlalqealEallvelfeeAnllakhaKRvTitpkDiq 125
                 +++  +risa   +   ++l+ +l+++  +A  +++haKR+T+t+ D+ 
  EPX71038.1  40 RRGGVKRISALVYEETRAVLKLFLESVIRDAVTYTEHAKRKTVTSLDVV 88 
                 477788999999999999***************************9986 PP

>> CENP-S  CENP-S protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.1   1.2e-07   0.00028      34      73 ..      47      94 ..      20      96 .. 0.81

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 1.2e-07
      CENP-S 34 ltelvykq........lenlakDLeaFakHAkRstittdDvlLlaRrn 73
                ++ lvy++        le++ +D  ++ +HAkR+t+t  Dv+  ++r+
  EPX71038.1 47 ISALVYEEtravlklfLESVIRDAVTYTEHAKRKTVTSLDVVYSLKRQ 94
                5566666655555555889999*******************9988875 PP

>> TFIID-31kDa  Transcription initiation factor IID, 31kD subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.0   7.7e-06     0.017      13      69 ..      37      93 ..      31     101 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 7.7e-06
  TFIID-31kDa 13 liLaslgvteyeerVvlqLldfayrytssvLedAkvlaehakkkevslddvrlAiqs 69
                  + +  gv+ ++  V++    +   +  sv++dA ++ ehak+k+v+  dv  +++ 
   EPX71038.1 37 RLARRGGVKRISALVYEETRAVLKLFLESVIRDAVTYTEHAKRKTVTSLDVVYSLKR 93
                 556667888888888888888888999***********************9888765 PP

>> Bromo_TP  Bromodomain associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   3.9e-05     0.087      35      70 ..      58      93 ..      37      97 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3.9e-05
                HHHHHHHHHHHHHHHHHTTSS-SS--HHHHHHHHHH CS
    Bromo_TP 35 iaqkYirelgeqaksfaehagRseptlkDvvltLqe 70
                +++ +++++ ++a  + eha R ++t  Dvv +L++
  EPX71038.1 58 VLKLFLESVIRDAVTYTEHAKRKTVTSLDVVYSLKR 93
                6777999999***********************997 PP

>> TFIID_20kDa  Transcription initiation factor TFIID subunit A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00011      0.25      33      65 ..      62      94 ..      51      95 .. 0.94

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00011
                 HHHHHHHHHHHHHHHTT-SEE-HHHHHHHHHHH CS
  TFIID_20kDa 33 FvesvtkfacklakhRksdklevrDiqlhlern 65
                 F esv+  a+    h k +++ + D+ + l+r+
   EPX71038.1 62 FLESVIRDAVTYTEHAKRKTVTSLDVVYSLKRQ 94
                 9******************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       511  (0.0285013); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 777.35
//
Query:       EPX71039.1  [L=136]
Description: histone H3 h3.1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.8e-52  175.8   1.4    5.4e-52  175.6   1.4    1.0  1  Histone        Core histone H2A/H2B/H3/H4
    1.2e-05   25.6   0.0    1.8e-05   25.0   0.0    1.2  1  CENP-S         CENP-S protein
    0.00015   21.8   0.0     0.0003   20.9   0.0    1.5  1  CENP-T_C       Centromere kinetochore component CENP-T histon
    0.00026   21.6   1.4    0.00032   21.3   1.4    1.1  1  PAF            PCNA-associated factor histone like domain
     0.0022   18.3   0.2     0.0049   17.1   0.0    1.6  2  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a


Domain annotation for each model (and alignments):
>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.6   1.4   1.5e-55   5.4e-52       1     131 []       1     132 [.       1     132 [. 0.99

  Alignments for each domain:
  == domain 1  score: 175.6 bits;  conditional E-value: 1.5e-55
                 XXEESXEEEXXXXEEXXXXXXXXXXHT.TS-SSSSB--TTT-XTTHHHHHHHHHHHHXXSXXSXHHHHHHHHHHHH.TTSSSXEEXHHHHHHHHHHHHH CS
     Histone   1 marekekarkesektapekkvsakker.kasskskkkkkrryrpgtvalkeirkyqkstdlliqklpfaRvvreivksekedlrisaeavlalqealEa 98 
                 mar+k++ark+++++ap+k++++k +r  a+++   kk++ryrpgtval+eir+yqkst+lli+klpf+R+vrei +++k+dlr++++av alqea+Ea
  EPX71039.1   1 MARTKQTARKSTGGKAPRKQLASKAARkAAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVGALQEAVEA 99 
                 9**************************9*********************************************************************** PP

                 HHHHHHHHHHHHHHHTTXSEEXHHHHHHHHHHT CS
     Histone  99 llvelfeeAnllakhaKRvTitpkDiqlArrlr 131
                 +lv+lfe++nl+a+h KRvTi+pkD+qlArrlr
  EPX71039.1 100 YLVSLFEDTNLCAIHGKRVTIQPKDMQLARRLR 132
                 *******************************97 PP

>> CENP-S  CENP-S protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.0     5e-09   1.8e-05      13      71 ..      70     130 ..      65     133 .. 0.85

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 5e-09
      CENP-S  13 kiveeeaa..ekeveatkqfiaaltelvykqlenlakDLeaFakHAkRstittdDvlLlaR 71 
                 ++v+e+a+  ++++++ +++++al e v + l +l +D ++ a H kR ti+++D+ L  R
  EPX71039.1  70 RLVREIAQdfKTDLRFQSSAVGALQEAVEAYLVSLFEDTNLCAIHGKRVTIQPKDMQLARR 130
                 5566654423667789999*************************************99766 PP

>> CENP-T_C  Centromere kinetochore component CENP-T histone fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0   8.3e-08    0.0003      11      72 ..      70     127 ..      58     135 .. 0.83

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 8.3e-08
    CENP-T_C  11 avvkklakrfakasgskaklekealkalekasdkffeqvgeDLeayakHagRKtidesDvil 72 
                  +v+ +a++f     +  + + +a+ al++a + ++  + eD +  a H++R ti+ +D+ l
  EPX71039.1  70 RLVREIAQDF----KTDLRFQSSAVGALQEAVEAYLVSLFEDTNLCAIHGKRVTIQPKDMQL 127
                 3455566666....56799****************************************975 PP

>> PAF  PCNA-associated factor histone like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   1.4   8.9e-08   0.00032       1      62 [.       1      58 [.       1      76 [. 0.90

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 8.9e-08
         PAF  1 mVRTkAdvssarkavaakAprkslgassssssssssspkkkkkkyvGGNpvcpRptPaWQKp 62
                m RTk ++   rk  ++kAprk+l+++   +++  ++  kk + y +G  v  R++   QK 
  EPX71039.1  1 MARTKQTA---RKSTGGKAPRKQLASKAARKAAPATGGVKKPHRYRPG-TVALREIRRYQKS 58
                99******...******************9999999988888888888.6888999888885 PP

>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1       1.9   6.9e+03      39      48 ..      20      29 ..      19      32 .. 0.64
   2 !   17.1   0.0   1.4e-06    0.0049       2      64 ..      65     128 ..      64     128 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 1.9
                   HHHHHHHHHH CS
  CBFD_NFYB_HMF 39 elaseAaeic 48
                   +las+Aa+++
     EPX71039.1 20 QLASKAARKA 29
                   5677777654 PP

  == domain 2  score: 17.1 bits;  conditional E-value: 1.4e-06
                    XXXHHHHHHHHHCC.TTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHH CS
  CBFD_NFYB_HMF   2 eLPiarvkkImksd.pdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehiklA 64 
                    +LP  r  + + +d + + ++ ++A   ++e+ve ++ +l + ++  + + kr ti++++++lA
     EPX71039.1  65 KLPFQRLVREIAQDfKTDLRFQSSAVGALQEAVEAYLVSLFEDTNLCAIHGKRVTIQPKDMQLA 128
                    78888888877777799999*****************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       435  (0.0242624); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 986.26
//
Query:       EPX71040.1  [L=1294]
Description: RAVE complex subunit Rav1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   5.3e-204  679.3   5.1   6.9e-204  678.9   5.1    1.1  1  Rav1p_C    RAVE protein 1 C terminal
  ------ inclusion threshold ------
      0.062   11.8   0.1      0.092   11.3   0.1    1.1  1  T6SS_TssF  Type VI secretion system, TssF


Domain annotation for each model (and alignments):
>> Rav1p_C  RAVE protein 1 C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  678.9   5.1  7.7e-208  6.9e-204       1     638 []     575    1233 ..     575    1233 .. 0.93

  Alignments for each domain:
  == domain 1  score: 678.9 bits;  conditional E-value: 7.7e-208
     Rav1p_C    1 glletwkakvdkekkklewletseletgieepslisgsslkkvavvdesrseLsiwdlksgvl....eyeeefeeedsikdldwtstpdsqsilavg 93  
                  gll+tw+a++ +  +++ ++e s+++t+i+ +++++gs+++kvavv+e+r +Lsi+d+ s+ +    e+++ f+++++i dldwtstp+s+sila+g
  EPX71040.1  575 GLLQTWMARI-SGPSNAIITEFSRVRTNIKAANMVKGSTSRKVAVVSENRLRLSIFDTGSSFFtaneEFTNVFNKYGPIIDLDWTSTPNSHSILAIG 670 
                  6899*****9.6666777999******************************************9**99***************************** PP

     Rav1p_C   94 FekkvllltqlRydylnkgpswaairkidireltpheigdsiWlkdgtLvvaaGnqlfikdkklelelkkksessikskkeksvdlfelvselngpL 190 
                  F+++v+ll+q+R +y+++ p+w++ir +++  +t++ i+ds Wl++gtLv aaGn+lf++++kl     + s    +  k++++++f+l+++lng+L
  EPX71040.1  671 FQHHVILLSQNRRSYISDAPCWVPIRLYNLGMYTDMVISDSSWLDNGTLVTAAGNNLFFFKSKLPD---DISLLFPSALKRTANNIFDLAYQLNGIL 764 
                  *****************************************************************9...45567888889999************** PP

     Rav1p_C  191 pvyHPqfLiqlilagklelvkeillkLfkklkflsedeeldsllelelekflkedekkksk.........kkeae.slae...eekeeeeeevevfd 274 
                  pv+HPqfL+ql+l ++  lv++ill ++ +lk+   d+ ++ ll++++ +f+++d++k ++            +e ++++   +e+ + +e+  ++ 
  EPX71040.1  765 PVFHPQFLQQLLLKNQEYLVRKILLLFYISLKN---DHPMHFLLNMDCLEFYEHDDEKLMSsfyealtkhA--NEiTVKKdfsDEQPSVSENPLAYV 856 
                  *******************************98...99*****************9999334666775431..222322223356667778888999 PP

     Rav1p_C  275 eevaksLaekLkkiklpqLtrheqitLvnvveaveevekerrslDenglrfllglklfllrkkeeeqkelslRdiswAlhSdsqeiLldlverqlkn 371 
                  e+++++L+  Lk++k+++Ltr++q+ L+nv+ea+ ++++ r+slD ng rf+++l++++l+k +++++ l++Rd  wA++S+++ +Lld++ +++++
  EPX71040.1  857 EAFTTDLCLLLKNKKVKTLTRSSQFYLLNVIEAFCKADQLRKSLDLNGRRFCIMLNQYVLNKYQHRSNLLPTRDALWAFYSTNKSVLLDYTVKAHGK 953 
                  9************************************************************************************************ PP

     Rav1p_C  372 kllWeaarelglfmWlkdsealrkqfeeiArneytkseerdPvkcslfYlALkKkqvlqgLWriaswhkEqkktlkfLsndFseprwktaAlKNAfa 468 
                  +llW+a++e++l +Wl++ +al+++fe++ rn++t++ +rdP+k+sl+++AL+K +vlq LW +asw kE++ t+kfLsndF+++rwk aA+KNAfa
  EPX71040.1  954 TLLWPAVEEYRLPFWLNQ-QALKNVFEDLCRNHFTNNGDRDPEKVSLYHIALGKVSVLQKLWSLASWSKESRPTVKFLSNDFTQNRWKVAASKNAFA 1049
                  ******************.****************************************************************************** PP

     Rav1p_C  469 LlskrRyeyAAaFFLLadslkdavnvllkqlkdlqLAiavarvyegddgpvLkelleeevLpeAvkegdrWlaswafwmlkrrdlavraLvtpleel 565 
                  Llsk+Ry yAAaFFLLads  da++v++++l+ l+LA+a+ rvyegd +++Lk+++ee vLp+A+  +drWla+w f+m++++ +++++L+ pl++l
  EPX71040.1 1050 LLSKHRYFYAAAFFLLADSPYDAAKVCIRNLHTLSLAVAIVRVYEGDGKECLKRIIEEFVLPSAAFYNDRWLANWGFTMINEKAKSIKSLLVPLRSL 1146
                  ************************************************************************************************* PP

     Rav1p_C  566 leek.......kkeeakse....................ksksflkdDPalvlLYkqLrkkslqtlkgalkvsekeeyefvlrvarlydrmGcdlla 635 
                  +e +       k                           ++++ ++dDPal+lLY+ Lr        + l+ ++  ey fvl++ar+y+ mGcdl+a
  EPX71040.1 1147 IEVDddliesfK------LdnheeetqgetenveenhgkTKNEHTSDDPALILLYDFLRC-------DVLQRDQMLEYLFVLNSARVYNEMGCDLIA 1230
                  **8866655441......03345566788999999999999999***************9.......44556789********************** PP

     Rav1p_C  636 LsL 638 
                  L+L
  EPX71040.1 1231 LEL 1233
                  *97 PP

>> T6SS_TssF  Type VI secretion system, TssF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1     1e-05     0.092     182     225 ..     805     848 ..     773     871 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 1e-05
   T6SS_TssF 182 ldldrLrlyLagdeelasaLyelLlahvkavvvrdpgedeervv 225
                 l +d+L +y + de+l+s++ye+L++h+++++v+++ +de++ v
  EPX71040.1 805 LNMDCLEFYEHDDEKLMSSFYEALTKHANEITVKKDFSDEQPSV 848
                 6799******************************9887754443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1294 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       555  (0.0309554); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.79u 0.31s 00:00:01.10 Elapsed: 00:00:00.46
# Mc/sec: 8530.41
//
Query:       EPX71041.1  [L=167]
Description: ubiquitin conjugating enzyme Ubc15 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-52  176.5   0.0    2.4e-52  176.3   0.0    1.0  1  UQ_con    Ubiquitin-conjugating enzyme


Domain annotation for each model (and alignments):
>> UQ_con  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  176.3   0.0   1.4e-56   2.4e-52       2     139 ..      10     159 ..       9     160 .. 0.97

  Alignments for each domain:
  == domain 1  score: 176.3 bits;  conditional E-value: 1.4e-56
                 HHHHHHHHHHSTTTTEEEEEEETTEECEEEEEEEB.TTSTTTTEEEEEEEE--TTTTTS--EEEESST-SCTTBETTSBB-CGGGS............T CS
      UQ_con   2 lqkelkelakkkpsgisaklvddenlfewkvlikgpedtpYeggvFklelefpedYPlkpPkvkfvtkifHPnvdksGevcldiLk............e 88 
                 l+k+lke++k++p+g+s++lvdd++++ew+v+i+gp+dt+Yegg+F+++l+fp+dYPl pPk+kf+t+i+HPnv+++Gevc++iL+             
  EPX71041.1  10 LRKQLKEIQKNPPQGFSVGLVDDKSIYEWEVMIIGPDDTLYEGGFFHATLTFPQDYPLMPPKMKFTTEIWHPNVHPDGEVCISILHppgddkfgyedaG 108
                 789******************************************************************************************999986 PP

                 TT--TTSHHHHHHHHHHHHHHS--TTS-SSHHHHHHHHHTHHHHHHHHHHH CS
      UQ_con  89 ekWspaltlesvllsiqsLlaepnpesplnkeaakllkkdreeykkkvkey 139
                 e+W p+++ e++l+s++s+l++pn+esp+n++aak+++++++e+kk+v++ 
  EPX71041.1 109 ERWLPVHSPETILISVVSMLSSPNDESPANIDAAKEFRENPQEFKKRVRRL 159
                 77**********************************************875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       494  (0.0275531); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 1170.21
//
Query:       EPX71042.1  [L=627]
Description: EMP70 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.4e-177  591.5  18.0   1.4e-177  591.5  18.0    1.4  2  EMP70     Endomembrane protein 70


Domain annotation for each model (and alignments):
>> EMP70  Endomembrane protein 70
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  591.5  18.0  7.9e-182  1.4e-177       2     519 .]      64     584 ..      63     584 .. 0.94
   2 ?   -5.3   2.0      0.59   1.1e+04     365     390 ..     590     615 ..     586     619 .. 0.67

  Alignments for each domain:
  == domain 1  score: 591.5 bits;  conditional E-value: 7.9e-182
       EMP70   2 ydYyd.llpfCkpeeekkkesesLgevLrGdrienspyelkfgkdeeckvlCtkkltkeelkklkelIkngYvvnwlvDnLPvatsfvs.........a 90 
                 y+Yyd  ++fC+pe+   ++ esLg+vL+Gdr++nsp el++ k+ +c  lC++ +t+ +++++k+lI+++Yvv+w +DnLP+a ++ +         +
  EPX71042.1  64 YEYYDdRFHFCRPET-VVQQPESLGSVLFGDRFYNSPLELRMLKNVSCLPLCSSYITEPDIQFFKDLISQNYVVHWNIDNLPIA-TYAEhanpgeyllT 160
                 9***99*******75.446779**************************************************************.34335778888888 PP

       EMP70  91 aGfplGfvdkeeekekyylnnhldfviryhkakeeekkrivgfevepksvkde.ee.eeCpkea.eleleeekkeeeteipftYsVkwresedvewasR 186
                 +GfplG v k    e ++l+nh+d++++yh++++ +++r+vg+ v+p s k++  +  eC++++ +  l++   + ++++  +YsV+w+ s+ ++wa+R
  EPX71042.1 161 PGFPLGRVTK----EGIHLYNHYDIIVEYHTTTQ-NQHRVVGAYVKPVSRKSKvVSdPECSTSTsPEILPD---RGDLTFVTSYSVTWKYST-TPWATR 250
                 9*******96....799*************8755.677*************98643478997663444455...6899*************7.****** PP

       EMP70 187 wdlylesvedskihwfsiinslvivlllslivavillrtlrkdiarynee..eeee.aqeesgWKlvhgdVfrpPknsllLsvlvGsGvqlllmalvtl 282
                 wd+y+ + ++++i+w+ ++ s ++ ++l++iv++il+rtl++di++yn+   ++ e +qe++gWKlvhgdVfrpP++++l+s+l+G+G+qll+m+  ++
  EPX71042.1 251 WDKYM-HGPSNQIRWMFLLYSGIFDFFLIFIVCLILFRTLNRDINKYNSAflDQ-EdVQEDFGWKLVHGDVFRPPRRPMLFSILLGTGAQLLFMTSAII 347
                 *****.67889**************************************96433.44****************************************** PP

       EMP70 283 llallgflspsnrgslltvalllyvllgliaGYvsarlyktfggekwkkntlltalllpgllflvffllnlilwakessgalpfgtlvlllllwflisv 381
                 l+a++g++ ps+rgsl+t+++ l++++g+++G+vs+  yk ++g   k+n+llt++++pg+l+l  +++n+++ +k+ss+a+pf++ +ll++l+++ +v
  EPX71042.1 348 LFAIFGIVAPSRRGSLATAIVALFIVSGFVSGFVSSISYKVMQGMLRKRNLLLTPFVVPGILLLGALFFNVLFSIKNSSSAVPFTSWLLLIFLYLVFTV 446
                 *******************************************99****************************************************** PP

       EMP70 382 PlvliGsllgfkkkaiehpvrtnqiprqipkqpwylkpllsvllgGilpFgaifielyfilsslwlekiYylfgfLflvfllliittaevtilltYfqL 480
                 Pl+++Gsl+gf+++++  pvrtnqiprqip+q+++ ++  s+++gG +pF++i ielyfil slw++ +Y++fgf f++f +li t+++++i+++Y+qL
  EPX71042.1 447 PLSFVGSLIGFRSREFVPPVRTNQIPRQIPSQSIWISTASSAFIGGAIPFVTILIELYFILDSLWFHPLYFMFGFSFFCFGILITTCVMISIITVYIQL 545
                 ************9999*********************************************************************************** PP

       EMP70 481 caedyrWwWrSflvggssalYvflysiyYyftklkisgf 519
                 c e+y+WwWrSf+++g++++Yvf++si+Y++++++ ++f
  EPX71042.1 546 CTENYNWWWRSFITPGFCGVYVFIFSIIYWINRISSTSF 584
                 *********************************998876 PP

  == domain 2  score: -5.3 bits;  conditional E-value: 0.59
       EMP70 365 pfgtlvlllllwflisvPlvliGsll 390
                  fg+ +++ +l fl++  + ++Gs+l
  EPX71042.1 590 YFGYSLMISILVFLLCGSVGFFGSFL 615
                 56777777777777777777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (627 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1003  (0.0559429); expected 358.6 (0.02)
Passed bias filter:                      347  (0.0193541); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.29s 00:00:00.94 Elapsed: 00:00:00.44
# Mc/sec: 4270.05
//
Query:       EPX71043.1  [L=242]
Description: mediator complex subunit Pmc4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.7e-14   52.9   3.9    5.3e-14   52.4   3.9    1.4  1  Med4            Vitamin-D-receptor interacting Mediator subun
     0.0047   15.8   0.6     0.0064   15.3   0.6    1.1  1  HAUS5           HAUS augmin-like complex subunit 5
  ------ inclusion threshold ------
      0.011   15.7   1.0        1.1    9.4   0.0    2.3  2  ER              Enhancer of rudimentary
      0.022   13.0   1.3      0.029   12.6   1.3    1.2  1  Exonuc_V_gamma  Exodeoxyribonuclease V, gamma subunit
      0.032   12.8   1.6      0.047   12.3   1.6    1.2  1  FapA            Flagellar Assembly Protein A
      0.046   14.0   1.7      0.046   14.0   1.7    1.6  2  His_kinase      Histidine kinase
        0.2   12.0   7.6        0.2   12.0   5.2    2.1  2  Syntaxin_2      Syntaxin-like protein
       0.24   10.7   2.4       0.18   11.1   0.7    1.6  2  DUF3810         Protein of unknown function (DUF3810)


Domain annotation for each model (and alignments):
>> Med4  Vitamin-D-receptor interacting Mediator subunit 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.4   3.9   2.3e-17   5.3e-14      11     172 ..      41     182 ..       9     216 .. 0.74

  Alignments for each domain:
  == domain 1  score: 52.4 bits;  conditional E-value: 2.3e-17
        Med4  11 ddelskslkeleehqknearilqLraeveslDekikeivksLkeyekeLkavpdqenskldtasiklaekrevdseeLLdYArrISkytsvppaepkas 109
                  ++l++ ++e +  ++ + +i++L +e  +l+e+i + +k+L +++   +++p         ++ +++ kr vd + LL+Y rr+Sk++s+pp      
  EPX71043.1  41 LKSLQNLISEHSLSNELSSQIESLIKEDHALEEEIESSMKELTSIYD--TTLP---------QNNNQKVKRTVDANTLLEYGRRLSKFSSAPP------ 122
                 46778888888888888888888888888888888888888888876..4566.........7889999**********************44...... PP

        Med4 110 vtkeptswlde..mlrga.afrPwPtEdeiRmGlLaalqlaaaegeerpgedpeeeeerkseeaeg 172
                        + +e  + + a   +PwP+Ed++R+  L++++ +  +    ++++  +e+e++s++  +
  EPX71043.1 123 ------GYNPEtgQDAKApVHYPWPSEDQMRKTSLFQYSTNLIAHPSANASQIFNEVEEASAQNHE 182
                 ......33333332222203458***************9987655555555555555444444443 PP

>> HAUS5  HAUS augmin-like complex subunit 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.6   2.9e-06    0.0064     386     475 ..      21     109 ..      10     124 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 2.9e-06
       HAUS5 386 rsevqrLeklaaerkealrsLqkkwkkIldFrarvseleeiiraLikansaakaeleqqpaevrefvqekliPafeaVveasnslkdlie 475
                  +e  + + l++++ e+ ++L++ +  I +   + +el ++i++Lik   a  +e+e++ +e+ +   ++l  + ++ v+ + +++ l+e
  EPX71043.1  21 STEKVNYHSLMENWSEMIHQLKSLQNLISEH-SLSNELSSQIESLIKEDHALEEEIESSMKELTSIYDTTLPQNNNQKVKRTVDANTLLE 109
                 45556678899******************96.6899****************************99998887777777777777766665 PP

>> ER  Enhancer of rudimentary
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.2     0.012        27      31      88 ..       6      67 ..       2      72 .. 0.71
   2 ?    9.4   0.0   0.00048       1.1      22      64 ..      73     115 ..      68     120 .. 0.90

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.012
          ER 31 icklyeeaLkea.npskksitYd..isdLfefidsladlsaLvleketks.ylprdkewike 88
                +++  e+ L+++ + s+++++Y+  +++  e i +l+ l+ L++e++ ++ + ++  + ike
  EPX71043.1  6 VISQIETCLSQHlRLSTEKVNYHslMENWSEMIHQLKSLQNLISEHSLSNeLSSQIESLIKE 67
                6666677777651457789999755789999*************998754144444555665 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00048
          ER  22 esvkealdgicklyeeaLkeanpskksitYdisdLfefidsla 64 
                 e+++++++++ ++y+++L ++n +k + t d++ L e+  +l+
  EPX71043.1  73 EEIESSMKELTSIYDTTLPQNNNQKVKRTVDANTLLEYGRRLS 115
                 6899*******************************99966665 PP

>> Exonuc_V_gamma  Exodeoxyribonuclease V, gamma subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   1.3   1.3e-05     0.029     510     609 ..      11     110 ..       1     120 [. 0.87

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.3e-05
                     T--SSS----TTS-SCTHHHHHHHHHHHHHHHHHHHHSSS-B-HHHHTTHHHHHHHHH----SHHHHHHHHHHHHHHHHHHHHHHTT--S-B-HH CS
  Exonuc_V_gamma 510 ngllegilpydevegseaellgklaellerLekwrqrlskprtleeWlerlselledffaedeeeeeelqelrealaelaeeaaaakfeqelsle 604
                     +++l++ l ++  + ++  l++++ e++++L+ +++ +s++   +e  +++++l+++  a +ee e +++el+++ +++  + ++ k++++++++
      EPX71043.1  11 ETCLSQHLRLSTEKVNYHSLMENWSEMIHQLKSLQNLISEHSLSNELSSQIESLIKEDHALEEEIESSMKELTSIYDTTLPQNNNQKVKRTVDAN 105
                     56666667777777778899***********************************************************9999999999999999 PP

                     HHHHH CS
  Exonuc_V_gamma 605 vvrel 609
                     ++ e+
      EPX71043.1 106 TLLEY 110
                     98775 PP

>> FapA  Flagellar Assembly Protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   1.6   2.1e-05     0.047     334     436 ..      22     115 ..       4     123 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 2.1e-05
        FapA 334 elkeklkeleeeleeleeeleklkkkikklpklkaekqlesekkeqlkklletkeklkeeleeleeelkelkeeleskkeeakikvnkeiypgvkikig 432
                 + k +++ l e+  e+  +l+ l++          e  l+ e ++q+++l+++  +l+ee+e+ ++el ++ +    +  +++ kv++++  ++ +++g
  EPX71043.1  22 TEKVNYHSLMENWSEMIHQLKSLQNL-------ISEHSLSNELSSQIESLIKEDHALEEEIESSMKELTSIYDTTLPQ--NNNQKVKRTVDANTLLEYG 111
                 33344444444444444444444444.......44455567888999****************999999999999988..5667888888888888887 PP

        FapA 433 kkkl 436
                 ++  
  EPX71043.1 112 RRLS 115
                 6655 PP

>> His_kinase  Histidine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       5.5   1.2e+04      39      48 ..      13      22 ..       5      32 .. 0.62
   2 ?   14.0   1.7   2.1e-05     0.046       2      53 ..      40      96 ..      39     110 .. 0.80

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 5.5
  His_kinase 39 kLskllrysl 48
                 Ls+ lr s+
  EPX71043.1 13 CLSQHLRLST 22
                4666666666 PP

  == domain 2  score: 14.0 bits;  conditional E-value: 2.1e-05
  His_kinase  2 elkaLqaqinPHFlfNtLns.iqslaee...dpeeaeemlekLskllrysl.eseee 53
                +lk Lq+ i+ H l N L+s i+sl++e    +ee+e+ +++L++++  +l +++++
  EPX71043.1 40 QLKSLQNLISEHSLSNELSSqIESLIKEdhaLEEEIESSMKELTSIYDTTLpQNNNQ 96
                89****************87489999443667889999*************765433 PP

>> Syntaxin_2  Syntaxin-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.5      0.01        23       9      51 ..       4      50 ..       2      55 .. 0.67
   2 ?   12.0   5.2   9.1e-05       0.2      10      71 ..      36      99 ..      28     119 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.01
  Syntaxin_2  9 nsnvstleklvkq...Lgtkk.dteelreklhelieeinelikktne 51
                ++ +s++e  ++q   L+t k +   l e+  e+i++++ l + ++e
  EPX71043.1  4 STVISQIETCLSQhlrLSTEKvNYHSLMENWSEMIHQLKSLQNLISE 50
                56677777777777667777766777777777777777777666654 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 9.1e-05
  Syntaxin_2 10 snvstleklvkqLgtkkdteelreklhelieeinelikktnellkklsqldnsssds..qqklq 71
                + + +l++l++ ++    + el +++++li+e   l +++++++k+l+++ ++++ +  +qk++
  EPX71043.1 36 EMIHQLKSLQNLISEHSLSNELSSQIESLIKEDHALEEEIESSMKELTSIYDTTLPQnnNQKVK 99
                557899999999999999*********************************9998765555554 PP

>> DUF3810  Protein of unknown function (DUF3810)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.7   8.1e-05      0.18      87     156 ..      14     101 ..       6     111 .. 0.83
   2 ?   -2.0   0.0      0.79   1.8e+03     225     239 ..     152     166 ..     144     202 .. 0.50

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 8.1e-05
     DUF3810  87 lserlglkkeeyseeelaelaeklveklnelreqverde................eevrkeakkaykklgeeypllsgf..ypkpKpl 156
                 ls++l l++e+++   l e  ++++ +l++l++ +++++                +++++e+++++k+l + y+   ++  ++k+K+ 
  EPX71043.1  14 LSQHLRLSTEKVNYHSLMENWSEMIHQLKSLQNLISEHSlsnelssqieslikedHALEEEIESSMKELTSIYDTTLPQnnNQKVKRT 101
                 78999999***********************999988888888888889999887779************999988555225667765 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.79
     DUF3810 225 frYSGylsalsyvln 239
                 f+YS++l a  +++ 
  EPX71043.1 152 FQYSTNLIAHPSANA 166
                 555555554443322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1626  (0.0906911); expected 358.6 (0.02)
Passed bias filter:                      714  (0.0398237); expected 358.6 (0.02)
Passed Vit filter:                        80  (0.00446204); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.57u 0.30s 00:00:00.86 Elapsed: 00:00:00.50
# Mc/sec: 1468.05
//
Query:       EPX71044.1  [L=441]
Description: nuclear pore associated protein Thp1-Sac3 complex subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.1e-14   52.7   0.0      4e-13   49.8   0.0    2.3  2  PCI       PCI domain


Domain annotation for each model (and alignments):
>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0     0.084   1.5e+03       2      25 ..      72      96 ..      71     133 .. 0.68
   2 !   49.8   0.0   2.2e-17     4e-13       3     105 .]     294     412 ..     292     412 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.084
                HHHHHHHHHHHTS.HHHHHHHHHHH CS
         PCI  2 sysdllkalrsgn.lsgfseelkdl 25
                sy d+++  +sg+ +s++s++ + +
  EPX71044.1 72 SYLDFVQKAVSGDpISCWSSLQAVY 96
                6889999999999999999988877 PP

  == domain 2  score: 49.8 bits;  conditional E-value: 2.2e-17
                 HHHHHHHHHHTSHHHHHHHHHHH.HHHHHHHTTHHH.HHHHHHHHHHHHHHHHHHHCESEEEHHHHHHHHTSSH..................HHHHHHH CS
         PCI   3 ysdllkalrsgnlsgfseelkdl.eeelladdglaq.llesLekkvrerllrqvskiyssislerlaklldlsv..................devEkil 81 
                 ++ l+++l++g+l +f+ +l+d+ +++++++ g++  l +++e +++++l+r+v++    ++++   k+ ++++                  d+vE+i+
  EPX71044.1 294 FQPLIESLKRGDLRSFQLSLEDVsRRNWFIRHGIYLtLHDRCEIVIWRNLFRKVFF----LTYQNAHKTPHVNGqflltaallsmqddtfdiDDVECIC 388
                 678********************999*********98999****************....777777777777777777778888888************ PP

                 HHHHHTTSSSEEEETTTTEEEECS CS
         PCI  82 vklIrdgeirakidqesgivvfkk 105
                 ++lI +g+i++++ + s ++v+kk
  EPX71044.1 389 ISLIDQGYIKGYMIHSSATLVLKK 412
                 *********************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (441 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       393  (0.0219198); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.33s 00:00:00.95 Elapsed: 00:00:00.53
# Mc/sec: 2501.34
//
Query:       EPX71045.1  [L=406]
Description: glucan 1,3-beta-glucosidase I/II [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      2e-17   63.6   7.7      3e-17   63.0   7.7    1.3  1  Cellulase  Cellulase (glycosyl hydrolase family 5)


Domain annotation for each model (and alignments):
>> Cellulase  Cellulase (glycosyl hydrolase family 5)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.0   7.7   1.7e-21     3e-17      10     277 ..      86     374 ..      77     378 .. 0.69

  Alignments for each domain:
  == domain 1  score: 63.0 bits;  conditional E-value: 1.7e-21
                 GEEECETTSCGGSHHHHHHHHHHHT-SEEEEEEE.CTGGTTSSTTTGCTHHHHHHHHHHHHHHHHTT-EEEEEEESSTTTCSSSSTTTTHHHHHHHHHH CS
   Cellulase  10 lkglstswgnpyttkalidevkdagfntvRlpvs.wgelvenapdykvdenslerveevvkyakenglyvildiHseegwltkadgnssedtaeeffkk 107
                  ++ls +w++   t++ ++ ++++g+n+vR+p++ w  +ve ++ y +++++   +++++++  +ng++v +d+H  +g  +++  ns ++ + ++ k+
  EPX71045.1  86 YRQLSNHWSTF-FTADEFARIASWGINAVRIPIGyWAFSVEGNEPYVQGQEY--WLDQAIQWSRDNGMKVWIDLHGAPGS-QNGFENSGKTGSIDWQKD 180
                 57788999985.68888899*************9778888888888555554..5899******************9554.344444444445555444 PP

                 ........HHHHHHHHHTTTTT...TEEEESSSS--STTCTCCTCHHHTTHHHHHHHHHHHHHHHHTTSSEEEEECHHHHTBHHHHHCT.SG.SSSSTT CS
   Cellulase 108 ........lwtqiAerykknde...vvifelmNEPhgnntgaewtseeadevkayaeeaikaIRavgpnrliivegnswsgnldgavln.dP.ndsqdn 193
                         ++  +A++y+++     v+++e++NEP gn  +        d++k+y  +++k+I +  ++   +v      + +d ++ +  P n +  n
  EPX71045.1 181 gnvertlqIMSYVANKYTQDAYkdvVIGIETVNEPLGNALN-------MDQLKDYDLQMYKMISSKSNSVATVVHD----AYVDLSEWTyGPiNGNMYN 268
                 555555558889*****74322335899*********6654.......5*****************9997777766....445554555467766789* PP

                 EEEEEEEETTTHHHTGCGSHSCTHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSTTSSH.............HHHHHHHHH.......HHHH....... CS
   Cellulase 194 liysvHfYgpsdfaqtefgkdltdktnlaqrledaakylvekgipviigEfGgsnadgd.............lakeeaekw.......ldyl....... 265
                 l++++H Y+ ++ ++ +      + ++  +++ ++ +++ ++    i gE+  + ad +              ++ + ++w       +          
  EPX71045.1 269 LVMDIHRYQLYQSNECSL-----TYNDHLNNVCNLGDQIEKNPFITITGEWSSTLADCTiwnssesgsafvgGNSGDISSWtdqyknaI--Rlfietql 360
                 *********999644333.....445566777788888888888999999998855544444444456666655555566644433331..03345555 PP

                 ..HHTTTEEEEEEE CS
   Cellulase 266 ..kekgiswiyWsl 277
                    e+g++w+yW++
  EPX71045.1 361 dqLERGAGWFYWTA 374
                 55556777777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (406 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       568  (0.0316805); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.32s 00:00:00.93 Elapsed: 00:00:00.52
# Mc/sec: 2363.60
//
Query:       EPX71046.1  [L=70]
Description: hypothetical protein SOCG_06301 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       340  (0.0189637); expected 358.6 (0.02)
Passed bias filter:                      224  (0.0124937); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.28s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 441.85
//
Query:       EPX71047.1  [L=214]
Description: ribosomal protein subunit L16 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.3e-36  122.7   0.2    1.2e-35  122.4   0.2    1.1  1  Ribosomal_L16  Ribosomal protein L16p/L10e


Domain annotation for each model (and alignments):
>> Ribosomal_L16  Ribosomal protein L16p/L10e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.4   0.2   6.5e-40   1.2e-35       1     132 []      47     183 ..      47     183 .. 0.96

  Alignments for each domain:
  == domain 1  score: 122.4 bits;  conditional E-value: 6.5e-40
                    HXSSXXBSSSX...XSSTSXXXSXXXXXESXEEEEES.SXEEEEHHHHHHHHHHHCTCCCCTSXCEEXXSXXXXEEEEE-SS-TTTSSSSXEEEEE CS
  Ribosomal_L16   1 pkrkkyrKsrk...ryirgvstkgtklefgdygLval.ekgqltaealeaariainrylkkkrgkklwirvfphhpvtkkagedRmgkGkGkpegw 92 
                    p+r+k++K +k   ++++g stkgt+le+g+yg++ +  + + +a++le+a+++i+r lk  ++  +++r+ +++pv+ k++e+RmgkGkG++e+w
     EPX71047.1  47 PRRVKFKKAQKgrvHVPTGGSTKGTQLEWGEYGMRLCdRSIRFRAKQLETAEQVIKRILKPIKNASIYTRFTCNIPVCVKGNETRMGKGKGTFEYW 142
                    6899********999*********************98889******************************************************* PP

                    EEEEXSSCEEEEE.TTXXXSHHHHHHHHHHHHTSSSXEEEE CS
  Ribosomal_L16  93 varvkigqiifei.kagvneeiakealrraasKlpiktkiv 132
                    +ar+ ig+++fe+  +g++ee a++alr+aa  lp+k ++v
     EPX71047.1 143 AARIPIGRVVFEVgGEGLREELARHALRQAAFHLPGKFELV 183
                    *************76669*******************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       299  (0.0166769); expected 358.6 (0.02)
Passed bias filter:                      277  (0.0154498); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.47
# Mc/sec: 1374.68
//
Query:       EPX71048.1  [L=461]
Description: homocitrate synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.9e-84  282.0   0.1    7.3e-84  281.4   0.1    1.3  1  HMGL-like     HMGL-like
  ------ inclusion threshold ------
      0.033   15.1   0.2        2.2    9.2   0.0    2.4  2  DUF2624       Protein of unknown function (DUF2624)
      0.091   13.0   0.0       0.58   10.4   0.0    2.2  2  PSRP-3_Ycf65  Plastid and cyanobacterial ribosomal protein (P
       0.11   11.9   0.0       0.24   10.9   0.0    1.4  1  ANAPC4        Anaphase-promoting complex, cyclosome, subunit 


Domain annotation for each model (and alignments):
>> HMGL-like  HMGL-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  281.4   0.1   1.6e-87   7.3e-84       2     264 .]      89     348 ..      88     348 .. 0.99

  Alignments for each domain:
  == domain 1  score: 281.4 bits;  conditional E-value: 1.6e-87
                 -EEEE-TTTHHHHTSSS---HHHHHHHHHHHHHHT-SEE--TSGGGT.THHHHHHHS---TT-B..--EE-SSHHHHHHHHH....TT-SEEEEEEES- CS
   HMGL-like   2 vkivdttLRDGeqalkaalsveeklaiakaLdeagvdeiEvgfpaaseddfevvraiakavkkarilalvrarekdikaavealkgagakrvhvfiats 100
                 + i+++tLR+Geq+++  +++e+k++iakaLde+gvd+iE++ p+ase+++ +++ai+k + k+++l+++r++++d ++ave    +g++ v+v+i ts
  EPX71048.1  89 FSIIESTLREGEQFANSFFDTEKKIEIAKALDEFGVDYIELTSPVASEQSRRDCEAICKLGLKSKVLTHIRCHMDDARVAVE----TGVDGVDVVIGTS 183
                 6799******************************************************************************....************* PP

                 HHHHHHHHSSTHHHHHHHHHHHHHHHHHTT-ETTT-BTTTBS--HHHHHHHHHHHHHHT-SEEEEEETTS---HHHHHHHHHHHHHHS-.GGGEEEEEB CS
   HMGL-like 101 elhlkaklkkdreevakkaeeavkaarslgkdvelsledasrtdleflaevveaaeeaGatriniaDtvGvltPneaaelisalkervkdkvilsvHcH 199
                 +  +k++++kd+ +++++a+e++++++s+g++v++s ed+ r+dl +l+ +++a++++G++r+ iaDtvG++tP+++++l+++l+ +v+  +++++H+H
  EPX71048.1 184 QYLRKYSHGKDMTYIINNATEVINYVKSKGIEVRFSSEDSFRSDLVDLLSLYKAVDKIGVNRVGIADTVGCATPRQVYDLVRTLRGVVS--CDIECHFH 280
                 *****************************************************************************************..******** PP

                 -TTS-HHHHHHHHHHTT--EEEEBTTS--SSBBB-BHHHHHHHHHHTT...-B----HHHHHHHHHHH CS
   HMGL-like 200 ndlGlAvantlaAveaGadrvdgtvnGlGeraGnaaleelvaalealg...vdtgldlqklrsiaalv 264
                 nd+G+A+an++ A+eaGa+++d++v+G+Ger+G ++l +l a ++++    v ++++l+klr++++l+
  EPX71048.1 281 NDTGMAIANAYCALEAGATHIDTSVLGIGERNGITPLGALLARMYVTDreyVTSKYNLKKLRDLENLI 348
                 **********************************************99999*************9987 PP

>> DUF2624  Protein of unknown function (DUF2624)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.037   1.6e+02      17      50 ..     183     216 ..     180     227 .. 0.82
   2 ?    9.2   0.0   0.00049       2.2      23      63 ..     415     456 ..     404     460 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.037
     DUF2624  17 aeellkyakqygveltksqAekivkilrekkidi 50 
                 ++ l ky++  ++    ++A+++++++++k i++
  EPX71048.1 183 SQYLRKYSHGKDMTYIINNATEVINYVKSKGIEV 216
                 5566788888888888899**********99887 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00049
     DUF2624  23 yakqygveltksqAekivkilre.kkidifnkeerkkllkel 63 
                  a+q +++lt++qA++  + +++  +++    ++++++l++ 
  EPX71048.1 415 RAEQLNLHLTDAQAKECTNKIKQlADVNSLAMDDVDRVLRQF 456
                 5899**************999984689999999999999986 PP

>> PSRP-3_Ycf65  Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.46   2.1e+03       8      23 ..       6      21 ..       4      22 .. 0.86
   2 ?   10.4   0.0   0.00013      0.58      29      45 ..     193     209 ..     187     212 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.46
                  TTS-HHHHHHHHHHHS CS
  PSRP-3_Ycf65  8 PredaWeeLkaeLesk 23
                  Pr+ a +eL ++L+ +
    EPX71048.1  6 PRNRACQELSRRLQIR 21
                  9********9999865 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00013
                   HHHHHHHHHHHHHHHHH CS
  PSRP-3_Ycf65  29 kerielLNqaTevInyW 45 
                   k++  ++N+aTevIny 
    EPX71048.1 193 KDMTYIINNATEVINYV 209
                   678899**********6 PP

>> ANAPC4  Anaphase-promoting complex, cyclosome, subunit 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   5.2e-05      0.24     130     189 ..     397     458 ..     395     460 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 5.2e-05
      ANAPC4 130 erlivllseLrGlakweeryeslgl..deeeidelletakslllkaeellqviseelkqfka 189
                  r +++ s+L G++  + r+e+l+l  + ++ +e++ ++k+l  + +  + ++++ l+qf+a
  EPX71048.1 397 SRYVHVGSRLTGWNAIKSRAEQLNLhlTDAQAKECTNKIKQLADVNSLAMDDVDRVLRQFHA 458
                 57788889******99999998555338888*****************************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (461 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       540  (0.0301188); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.65u 0.27s 00:00:00.92 Elapsed: 00:00:00.48
# Mc/sec: 2865.90
//
Query:       EPX71049.1  [L=1006]
Description: rRNA processing protein Rrp12-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-06   27.8   3.1     0.0025   17.5   0.0    4.0  6  NUC173    NUC173 domain
    0.00084   19.4   2.7        1.5    9.2   0.0    5.9  6  HEAT      HEAT repeat
     0.0066   16.7   0.0      0.025   14.9   0.0    2.0  1  TAF6_C    TAF6 C-terminal HEAT repeat domain
  ------ inclusion threshold ------
      0.015   15.4   7.2        4.4    7.3   0.1    4.4  4  Cnd1      non-SMC mitotic condensation complex subunit 1
       0.52   10.2   3.8        8.3    6.3   0.4    2.9  2  Urb2      Urb2/Npa2 family


Domain annotation for each model (and alignments):
>> NUC173  NUC173 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0         1   3.7e+03     174     199 ..     139     164 ..     122     169 .. 0.67
   2 ?   -2.5   0.0      0.92   3.3e+03     116     187 ..     175     245 ..     165     261 .. 0.58
   3 !    8.1   0.1   0.00054       1.9       9     125 ..     376     487 ..     366     491 .. 0.82
   4 !   17.5   0.0     7e-07    0.0025     153     200 ..     493     540 ..     486     543 .. 0.93
   5 ?   -3.6   0.0       2.1   7.5e+03       3      31 ..     617     645 ..     616     651 .. 0.82
   6 ?   -2.5   0.0      0.95   3.4e+03       4      54 ..     835     886 ..     815     903 .. 0.49

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 1
      NUC173 174 klaklLsnaLyeqpeLrltickaLrk 199
                 +l+ lL+  + ++p++r   ++aL+ 
  EPX71049.1 139 SLTVLLKYSIDSRPKIRKCAIQALQG 164
                 45556666777889999999999986 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.92
      NUC173 116 fFveellplaealeqkakeaeeakksveakiletlveqiWslLPsfce.lptDlkesfkklaklLsnaLyeqp 187
                 f +++++ l  +++++ +e+   ++     + ++ ++q+ + +  f + + tDl ++  +l ++L + +++ +
  EPX71049.1 175 FLTSRIIALCSQVFRELNESP--SSDKANVSTSIHCMQLLDEFVDFQHvSGTDLGTTTGSLVSILQSDIASSE 245
                 556666666666666666665..33333334556666777777666652346777777777766666666555 PP

  == domain 3  score: 8.1 bits;  conditional E-value: 0.00054
      NUC173   9 lLslkyqaawkevlevlsalfeklgkrsspllkkilktlgelreseefelkkeadevigaairamGpevvLevl.PLnleeeeeeklsegraWLLPlLr 106
                 +L+lk ++ ++ ++ +l+ l+++ +k+   +l ++ ++l+   ++ + + +ke+++ +    +  G e+ ++ l P+n  +  +    ++ +WL  +L 
  EPX71049.1 376 SLRLKRTSIINTCCAFLTLLVKAARKEHMDMLFNTFQDLARAINQWKTPKSKEVKQLFMVSFEKFGVETTITSLaPINELS--K---FQRYSWLKDILL 469
                 6888889999*****************98899999999999999999999******************9885543898883..3...34569**99998 PP

      NUC173 107 dnvrnaeLafFveellpla 125
                 d+ +n  L+ F + ++p++
  EPX71049.1 470 DSENNDFLE-FCNVFIPVI 487
                 887776665.667777765 PP

  == domain 4  score: 17.5 bits;  conditional E-value: 7e-07
      NUC173 153 qiWslLPsfcelptDlkesfkklaklLsnaLyeqpeLrltickaLrkL 200
                 + Ws+LP+fc++  D +   +++ k +++  y+q++ r +i+k++ +L
  EPX71049.1 493 EWWSVLPAFCSSVNDPSALSEEVLKKMASTVYQQEKYREPIVKSFISL 540
                 57**************9999***********************99876 PP

  == domain 5  score: -3.6 bits;  conditional E-value: 2.1
      NUC173   3 lkaleslLslkyqaawkevlevlsalfek 31 
                 ++a+ slL++  + +wk  l+ l +lf++
  EPX71049.1 617 VNAFPSLLNIAPSDTWKPFLPHLVKLFNQ 645
                 67788899999999999999999888875 PP

  == domain 6  score: -2.5 bits;  conditional E-value: 0.95
      NUC173   4 kaleslLslkyqaawkevlevlsalfeklgkrs.spllkkilktlgelrese 54 
                 +++e  Ls + q++++    +++ ++++  k+  + ++++++ ++  + +++
  EPX71049.1 835 ELMELNLSSSNQEVARTAVGFVKMIITVSPKETiERFMDSLMPSIFRWLKEH 886
                 2222223333333333333333333333322223444555555555555555 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.0   0.00043       1.5       4      28 ..     142     166 ..     140     168 .. 0.87
   2 ?   -2.4   0.0       2.3   8.4e+03      11      29 ..     242     260 ..     233     261 .. 0.75
   3 ?    0.9   0.0      0.21   7.5e+02       1      14 [.     497     510 ..     497     511 .. 0.90
   4 ?    0.8   0.0      0.23   8.1e+02      10      28 ..     742     760 ..     737     763 .. 0.84
   5 ?    0.1   0.0      0.37   1.3e+03       1      21 [.     833     853 ..     833     862 .. 0.77
   6 ?    0.9   0.0       0.2   7.2e+02       1      28 [.     875     902 ..     875     905 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00043
                 HHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAakaLgala 28 
                 +llk   D+ p++R+ A++aL  ++
  EPX71049.1 142 VLLKYSIDSRPKIRKCAIQALQGVS 166
                 799999***************8765 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 2.3
                 -SSHHHHHHHHHHHHHHHH CS
        HEAT  11 DpspeVReaAakaLgalae 29 
                  +s +V + A   L++l++
  EPX71049.1 242 ASSEFVVQKATSLLANLLS 260
                 3888999999999999976 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.21
                 HHHHHHHHHT-SSH CS
        HEAT   1 llPlllkllsDpsp 14 
                 +lP++++  +Dps+
  EPX71049.1 497 VLPAFCSSVNDPSA 510
                 69**********96 PP

  == domain 4  score: 0.8 bits;  conditional E-value: 0.23
                 T-SSHHHHHHHHHHHHHHH CS
        HEAT  10 sDpspeVReaAakaLgala 28 
                 +D  ++VR+ A + L+++ 
  EPX71049.1 742 KDHMADVRAKAYELLVEMG 760
                 78999********999875 PP

  == domain 5  score: 0.1 bits;  conditional E-value: 0.37
                 HHHHHHHHHT-SSHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAa 21 
                 l+ l+  +ls+++ eV ++A+
  EPX71049.1 833 LMELMELNLSSSNQEVARTAV 853
                 577777789*******77776 PP

  == domain 6  score: 0.9 bits;  conditional E-value: 0.2
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgala 28 
                 l+P + ++l+  +++V   A + L +++
  EPX71049.1 875 LMPSIFRWLKEHNAFVKIKAKQLLDRML 902
                 89**************999887777665 PP

>> TAF6_C  TAF6 C-terminal HEAT repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   7.1e-06     0.025      17      64 ..     149     196 ..     121     241 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 7.1e-06
      TAF6_C  17 edhwaLRdfAAslLakilkkysssyktLkprvtrtllkvlldpkkslg 64 
                 +   ++R+ A + L+ + kk ++s++ L++r++ ++++v+ + ++s++
  EPX71049.1 149 DSRPKIRKCAIQALQGVSKKNETSSSFLTSRIIALCSQVFRELNESPS 196
                 555789**********************************87776654 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.1    0.0012       4.4      63     119 ..     143     208 ..     114     226 .. 0.72
   2 ?   -2.4   0.0       1.2   4.4e+03      72     106 ..     382     420 ..     360     437 .. 0.62
   3 ?    5.1   0.0    0.0059        21      48      88 ..     673     714 ..     668     760 .. 0.85
   4 ?    3.9   0.2     0.014        49      20     101 ..     789     875 ..     783     934 .. 0.61

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0012
        Cnd1  63 laklleDenprVvanalaalteiseksenaiynllpdiisklsd...alne......csewgqiti 119
                 l+k   D+ p++++ a+ al+ +s+k+e+    l++ ii   s+   +lne      ++  + i+ 
  EPX71049.1 143 LLKYSIDSRPKIRKCAIQALQGVSKKNETSSSFLTSRIIALCSQvfrELNEspssdkANVSTSIHC 208
                 556668********************8877777777777666664443333322233555555555 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.2
        Cnd1  72 prVvanalaalteisekse....naiynllpdiisklsd 106
                 +++++ + a+lt + + +     ++++n ++d++  +++
  EPX71049.1 382 TSIINTCCAFLTLLVKAARkehmDMLFNTFQDLARAINQ 420
                 567777777777777664411224455555555555543 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.0059
        Cnd1  48 Lilndmvkekg.flselaklleDenprVvanalaalteisek 88 
                 L +++mv+    f+ +l + l D  ++V++n+++ l e  + 
  EPX71049.1 673 LSNPNMVETVSpFVGNLVESLVDVGASVQSNSKYTLLERFKT 714
                 678999997777************************998766 PP

  == domain 4  score: 3.9 bits;  conditional E-value: 0.014
        Cnd1  20 eylvepLrkrLkDedpyVRktaaivvakL...ilnd..mvkekgflselaklleDenprVvanalaalteiseksenaiynllpdii 101
                  ++ + + ++L  + p+   ++++ +++L   ++ +    +   +++ ++  l+ +n++V   a+ + + i + s++++++ + d++
  EPX71049.1 789 KEYFTMVSAGLFESTPTLTTCTILSLTRLyyeFRDEidQSIIDSLMELMELNLSSSNQEVARTAVGFVKMIITVSPKETIERFMDSL 875
                 566666777777777777888888888885442222113444556677777788888888888888888888887777666665543 PP

>> Urb2  Urb2/Npa2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.2     0.015        55      87     147 ..     162     221 ..     107     264 .. 0.68
   2 ?    6.3   0.4    0.0023       8.3      17      92 ..     356     428 ..     340     457 .. 0.65

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.015
        Urb2  87 tsgstelsakhAkalaRlltslceptvssv.....ssLtsetsslkkplgkhapllLvaYiklqle 147
                  +g ++ ++++ ++l+  +  lc +    v     +  + +++++  + + h++ lL +++ +q  
  EPX71049.1 162 LQGVSKKNETSSSFLTSRIIALCSQ----VfrelnE--SPSSDKANVSTSIHCMQLLDEFVDFQHV 221
                 3444555566666666666667776....3323431..4778888888888888888888888765 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0023
        Urb2  17 lfsqynveqtLslvstvlspssaeess..eifsalckllssilrhhrdklsgrfhlllavlqaLlellraeetsgste 92 
                 +   + + ++ + +s+++ ++++ + +  +i +++c+ l  +++  r++   ++ +l +++q L +++ +++t++s+e
  EPX71049.1 356 A--LHVITHVTGKISKLIGSARSLRLKrtSIINTCCAFLTLLVKAARKE---HMDMLFNTFQDLARAINQWKTPKSKE 428
                 3..2333334444444444444433337788888888888888888865...77788888888888887766555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1006 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       951  (0.0530426); expected 358.6 (0.02)
Passed bias filter:                      490  (0.02733); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.87u 0.30s 00:00:01.17 Elapsed: 00:00:00.51
# Mc/sec: 5934.36
//
Query:       EPX71050.1  [L=774]
Description: PSP1 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.6e-33  112.7   1.9    1.3e-32  112.0   1.9    1.4  1  PSP1      PSP1 C-terminal conserved region


Domain annotation for each model (and alignments):
>> PSP1  PSP1 C-terminal conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.0   1.9     7e-37   1.3e-32       1      86 []     674     759 ..     674     759 .. 0.99

  Alignments for each domain:
  == domain 1  score: 112.0 bits;  conditional E-value: 7e-37
        PSP1   1 kqvlrlatpedvstnlenkqdeekalhiaqeklkelnlnmklldaefqfdrkkltfyYvaeervDFreLvkeLfkfyktRIwLcai 86 
                 k+++rla++++v+++  + qde +al ++q+k+++ +l+m++ld e+q+drkkltfyY a++r+DFreLv++Lfk+yktRIw+ca+
  EPX71050.1 674 KHIYRLAESREVDELASKYQDESQALLVCQAKVRQRKLPMEVLDGEYQWDRKKLTFYYHAKQRIDFRELVRDLFKVYKTRIWMCAV 759
                 789*********************************************************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (774 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       587  (0.0327403); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.72u 0.33s 00:00:01.05 Elapsed: 00:00:00.53
# Mc/sec: 4400.79
//
Query:       EPX71051.1  [L=123]
Description: hypothetical protein SOCG_06306 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       440  (0.0245412); expected 358.6 (0.02)
Passed bias filter:                      271  (0.0151152); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.31s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 774.19
//
Query:       EPX71052.1  [L=131]
Description: hypothetical protein SOCG_06307 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       772  (0.0430587); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.47
# Mc/sec: 829.16
//
Query:       EPX71053.1  [L=415]
Description: hypothetical protein SOCG_01271 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-21   76.1  16.6    1.1e-11   44.3   3.5    2.3  2  zf-CCCH    Zinc finger C-x8-C-x5-C-x3-H type (and similar)
    1.6e-10   40.5  16.5    1.3e-07   31.2   2.6    2.3  2  zf-CCCH_4  CCCH-type zinc finger
    2.7e-08   33.6  21.0    2.8e-07   30.4   6.8    2.3  2  zf_CCCH_4  Zinc finger domain
  ------ inclusion threshold ------
      0.017   15.6   3.1      0.017   15.6   3.1    2.5  2  zf-CCCH_2  RNA-binding, Nab2-type zinc finger
        9.2    7.0  11.1        6.8    7.4   1.6    2.3  2  Torus      Torus domain


Domain annotation for each model (and alignments):
>> zf-CCCH  Zinc finger C-x8-C-x5-C-x3-H type (and similar)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.3   3.5   3.1e-15   1.1e-11       1      26 [.     332     357 ..     332     358 .. 0.97
   2 !   37.6   5.4     4e-13   1.4e-09       1      26 [.     370     395 ..     370     396 .. 0.96

  Alignments for each domain:
  == domain 1  score: 44.3 bits;  conditional E-value: 3.1e-15
                 -HCHCBCHHHHHS--TTGGG-SSBSC CS
     zf-CCCH   1 yktelCrffmrtGyCkyGdrCkFaHg 26 
                 ykte+C++++ tG C+yG++C+FaHg
  EPX71053.1 332 YKTEPCKNWQTTGNCRYGNKCQFAHG 357
                 9************************9 PP

  == domain 2  score: 37.6 bits;  conditional E-value: 4e-13
                 -HCHCBCHHHHHS--TTGGG-SSBSC CS
     zf-CCCH   1 yktelCrffmrtGyCkyGdrCkFaHg 26 
                 yk e+Cr fm +GyC+yG rC+F H+
  EPX71053.1 370 YKSEPCRSFMLYGYCPYGLRCCFLHD 395
                 89***********************8 PP

>> zf-CCCH_4  CCCH-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2   2.6   3.8e-11   1.3e-07       2      21 ..     336     356 ..     335     357 .. 0.95
   2 !   14.9   6.2   4.7e-06     0.017       2      22 .]     374     395 ..     373     395 .. 0.97

  Alignments for each domain:
  == domain 1  score: 31.2 bits;  conditional E-value: 3.8e-11
   zf-CCCH_4   2 lCpyfa.kGsCrfGdnCrFsH 21 
                 +C++++ +G+Cr+G++C F+H
  EPX71053.1 336 PCKNWQtTGNCRYGNKCQFAH 356
                 8******************** PP

  == domain 2  score: 14.9 bits;  conditional E-value: 4.7e-06
   zf-CCCH_4   2 lCpyfa.kGsCrfGdnCrFsHd 22 
                 +C++f+  G C +G +C F+Hd
  EPX71053.1 374 PCRSFMlYGYCPYGLRCCFLHD 395
                 8*****99*************9 PP

>> zf_CCCH_4  Zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   6.8   7.8e-11   2.8e-07       1      19 []     337     356 ..     337     356 .. 1.00
   2 !    9.1   6.3   0.00039       1.4       1      19 []     375     394 ..     375     394 .. 0.94

  Alignments for each domain:
  == domain 1  score: 30.4 bits;  conditional E-value: 7.8e-11
   zf_CCCH_4   1 Ckfflq.GtCkkGdkCrFaH 19 
                 Ck++++ G+C++G+kC+FaH
  EPX71053.1 337 CKNWQTtGNCRYGNKCQFAH 356
                 ******************** PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00039
   zf_CCCH_4   1 Ckfflq.GtCkkGdkCrFaH 19 
                 C+ f+  G+C++G +C F+H
  EPX71053.1 375 CRSFMLyGYCPYGLRCCFLH 394
                 *************9998888 PP

>> zf-CCCH_2  RNA-binding, Nab2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.6   3.1   4.8e-06     0.017       1      18 []     336     357 ..     336     357 .. 0.97
   2 ?    4.5   5.2     0.015        55       1      17 [.     374     394 ..     374     394 .. 0.97

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 4.8e-06
   zf-CCCH_2   1 pCrffpn...C.tnpkCpFaHP 18 
                 pC+++ +   C ++ kC FaH+
  EPX71053.1 336 PCKNWQTtgnCrYGNKCQFAHG 357
                 8********************6 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.015
   zf-CCCH_2   1 pCrffpn...C.tnpkCpFaH 17 
                 pCr f+    C ++ +C F H
  EPX71053.1 374 PCRSFMLygyCpYGLRCCFLH 394
                 8******************99 PP

>> Torus  Torus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   1.6    0.0019       6.8      56      91 ..     317     356 ..     294     363 .. 0.63
   2 ?    4.1   2.4      0.02        71      72      92 ..     375     395 ..     365     409 .. 0.77

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0019
                 HHH----HHH...HSTT--B-HHH.HHT--SSGGG-SSB- CS
       Torus  56 kkdsGytkad...kekesyfClfF.arGlCakGkkCeylH 91 
                   ++G t+++      ++  C  + + G C +G+kC++ H
  EPX71053.1 317 GSNNGSTTSTgkrALYKTEPCKNWqTTGNCRYGNKCQFAH 356
                 445555554411122334556655278************9 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.02
                 B-HHHHHT--SSGGG-SSB-S CS
       Torus  72 fClfFarGlCakGkkCeylHr 92 
                 +  f   G+C++G +C +lH+
  EPX71053.1 375 CRSFMLYGYCPYGLRCCFLHD 395
                 3345567*************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (415 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       452  (0.0252106); expected 358.6 (0.02)
Passed bias filter:                      265  (0.0147805); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.68u 0.33s 00:00:01.01 Elapsed: 00:00:00.57
# Mc/sec: 2180.00
//
Query:       EPX71054.1  [L=905]
Description: GTPase Msp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.6e-43  148.7   0.6    3.7e-43  147.5   0.0    2.0  2  Dynamin_N  Dynamin family
    1.9e-08   33.9   0.9    1.9e-08   33.9   0.9    3.3  2  Dynamin_M  Dynamin central region
    2.4e-05   24.4   0.0     0.0001   22.3   0.0    2.1  1  MMR_HSR1   50S ribosome-binding GTPase
  ------ inclusion threshold ------
       0.01   16.2   0.1       0.27   11.6   0.0    2.6  2  AAA_16     AAA ATPase domain
        0.1   12.8   0.0       0.24   11.6   0.0    1.7  1  Roc        Ras of Complex, Roc, domain of DAPkinase
       0.15   11.8   0.1       0.15   11.8   0.1    3.1  4  AAA_15     AAA ATPase domain


Domain annotation for each model (and alignments):
>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.2       3.9   1.2e+04      48      53 ..     232     237 ..     209     263 .. 0.46
   2 !  147.5   0.0   1.3e-46   3.7e-43       1     168 []     268     442 ..     268     442 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 3.9
                 CS...S CS
   Dynamin_N  48 eravke 53 
                 +++ ++
  EPX71054.1 232 QESKDD 237
                 122222 PP

  == domain 2  score: 147.5 bits;  conditional E-value: 1.3e-46
                 EEEEEBTTTTHHHHHHHHHTS--S---SSS---S-EEEEECCT---CCS...SSEEEE.T-EB--CHHHHHHHHHHHHHHHTSSSS--SS-EEEEEEET CS
   Dynamin_N   1 iavvGsqSsGKSSvlnaLlgedilprgpnptTrrplelqlgeeeeaseravkeelkek.ekkledfsevreeieketekiagankgiskkvillkilsl 98 
                 i+vvGsqSsGKSSvl+a++g+++lp+g+n++Trrp+el+l +++e  +++   e++ +   +++df++v++ +++ ++ i    +g+++++i l+i++ 
  EPX71054.1 268 IVVVGSQSSGKSSVLEAIVGHEFLPKGSNMVTRRPIELTLVHSKE--TTTPYCEFNGFqFGQITDFTKVQQILTDLNMAIP-PRQGVNDDPIRLTICAS 363
                 89*****************************************99..4467777777787888899999999998888888.888************** PP

                 TS-SEEEEE---B-SSSGTTS.........HHHHHHHSTTEEEEEEEETTS-CCC-CHHHHHHHHSTTBTTEEEEEE-C CS
   Dynamin_N  99 lvkgltlvDlPGldsvnkrdq.........elvkeyikkadiilavtsanhdlsnsealflarevdpkgkrtivvltkl 168
                 + ++l+l+DlPG+++++  dq         +l+++yi++ +iilav +a++dl+ns al+ +r vdp g rti+v+tk+
  EPX71054.1 364 HIPNLSLIDLPGYIQIHSSDQpvdlddkiaSLCDKYIQEPNIILAVCAADVDLANSTALKASRRVDPLGLRTIGVITKM 442
                 *****************************************************************************95 PP

>> Dynamin_M  Dynamin central region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   0.9   6.5e-12   1.9e-08       1     263 [.     450     703 ..     450     718 .. 0.79
   2 ?   -1.7   1.6      0.44   1.3e+03      61     100 ..     852     891 ..     851     903 .. 0.85

  Alignments for each domain:
  == domain 1  score: 33.9 bits;  conditional E-value: 6.5e-12
   Dynamin_M   1 vvdilenkvipLklGYvgVvnR.sqkdI.nkkksieea.lkkEkaFFeshpayrkl..adkaGtpyLakkLnqiLvehIrkslPelkkkineklqklek 94 
                 +v+il+n+ +pL+ GY+gV+ +  q    + ++++++    +E+++F+ hp +r+l    + G+++L k L ++L    +k l    + i+++l +++ 
  EPX71054.1 450 AVSILRNEHYPLHYGYIGVISKvPQLSMwSRNQNLTDIvSSRERSYFSAHPEFRELpvLPMLGIQNLRKNLIHVLEYTMSKNLQYTADSIRSELDDCSY 548
                 689******************943434324455666551578***********99987899************************************99 PP

   Dynamin_M  95 eleelgeskpsdeektklllqlitkfkedfkklieGesevstkelsggarireiFnetlekslekidpleelsdeeirtairnsrGrelplfvpekaFe 193
                 + +   +++     +++++ + +   k  fk+l +       ++ ++ a ++e +ne++   l +   ++    ++i +  ++sr    +  ++ ++  
  EPX71054.1 549 QYKVQYNDRLL--TAESYIAENLDVLKAAFKELSQKL-----DKNEVRALLKETLNEKILDLLAERYWMD----QNILDWTKQSRTVDEHWQYKLDSCV 636
                 98876665544..799999999999999999998764.....3445667788888887777777766665....6999999999987666666655555 PP

   Dynamin_M 194 alvkkqikkleepalkcvelVyeelekiveklekelkrFpnLreeikevvedllreqeeptkemienlie 263
                 +++   +   +   l++ el ++++e+i+++  + + + p   + i ++++d+lr++  +t e++en ++
  EPX71054.1 637 SMLT-RMGLGRVSTLQVTELLSKKIEEISKQ--SPFGEHPGALQYILNATQDILRRRYHNTSEQVENCVK 703
                 4444.24444455678889999999999998..7899999999999999999999999999999999887 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.44
   Dynamin_M  61 yLakkLnqiLvehIrkslPelkkkineklqklekeleelg 100
                  L++ L++ ++    ++ P+ k++i+ + +k   el+ l+
  EPX71054.1 852 RLIHSLTSDQLASLVDENPRVKSQIQLQRKKQALELALLK 891
                 588999999999999************9999999998877 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   3.5e-08    0.0001       2      72 ..     268     394 ..     267     439 .. 0.79

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 3.5e-08
                 EEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEETTEE..................................................... CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvklkgke..................................................... 47 
                 +++vG   +GKS+++ a++g +   +  + +Tr ++e ++ ++++                                                      
  EPX71054.1 268 IVVVGSQSSGKSSVLEAIVGHEFLPKGSNMVTRRPIELTLVHSKETttpycefngfqfgqitdftkvqqiltdlnmaipprqgvnddpirlticaship 366
                 89*********************************999998554336889999999999999999999999**************************** PP

                 .EEEEECGGCSS..HHHHHHHHHHHHHH CS
    MMR_HSR1  48 .ielvDtpGlie..gaseekglgkafla 72 
                  + l+D+pG i+  ++++  +l +++++
  EPX71054.1 367 nLSLIDLPGYIQihSSDQPVDLDDKIAS 394
                 *********7653233333366555555 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   8.9e-05      0.27       9      45 ..     249     286 ..     245     398 .. 0.78
   2 ?    1.4   0.1      0.13   3.8e+02      47     154 ..     574     724 ..     563     741 .. 0.58

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 8.9e-05
      AAA_16   9 leqLlsalervrsgrp.elvllsGesGvGKsslvrell 45 
                 ++ +l+ +++ +s+ + ++++++G + +GKss+++++ 
  EPX71054.1 249 IRNILHDIQDDNSHITlPSIVVVGSQSSGKSSVLEAIV 286
                 44454555555555559*****************9875 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.13
      AAA_16  47 alekdggiflrgkcdqlesaipysalaqalareellrqllde................aesaeleawrekleeala....................... 106
                 a+ k+    l++k d++         ++al +e+l +++ld                 ++ +  e+w+ kl++ ++                       
  EPX71054.1 574 AAFKE----LSQKLDKN--------EVRALLKETLNEKILDLlaerywmdqnildwtkQSRTVDEHWQYKLDSCVSmltrmglgrvstlqvtellskki 660
                 44444....77777777........33344444444444444444477666666666644446666666666666688888888777777777777755 PP

      AAA_16 107 .......avpelagaea.....srllellkrll.allsrder.........plvlvlDdlqwadeaslql 154
                        + +      +     + +l++ +++l ++++++++         ++ + +Dd +w  + s +l
  EPX71054.1 661 eeiskqsPFG------EhpgalQYILNATQDILrRRYHNTSEqvencvkpyKFEVEIDDEEWKASRSEAL 724
                 5543333222......134444333333344443333333335566777555999999999888888877 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0     8e-05      0.24       2      64 ..     268     326 ..     267     345 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 8e-05
                 EEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE- CS
         Roc   2 vvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDta 64 
                 +v+vG +++GK+s l+ +v ++f +k ++++    ++ ++++ k++    ++  +++n + ++
  EPX71054.1 268 IVVVGSQSSGKSSVLEAIVGHEFLPKGSNMVTRRPIELTLVHSKET----TTPYCEFNGFQFG 326
                 89**********************9999888777776666443332....2234555555555 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.4      0.45   1.4e+03      99     123 ..     214     238 ..     148     268 .. 0.51
   2 ?   11.8   0.1   4.9e-05      0.15      25      43 ..     267     285 ..     245     291 .. 0.81
   3 ?    4.5   0.3    0.0079        23     176     300 ..     492     645 ..     463     671 .. 0.74
   4 ?   -2.8   0.3       1.3     4e+03     132     132 ..     750     750 ..     675     882 .. 0.58

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.45
      AAA_15  99 kekkkadlllkkkesdlkktikdkk 123
                 ++++++++l ++++++l + +kd  
  EPX71054.1 214 DDENSYEKLNEDEKQRLAQESKDDR 238
                 2222222222222222222222222 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 4.9e-05
      AAA_15  25 ltvliGkNnsGKSsileal 43 
                   v++G ++sGKSs+lea+
  EPX71054.1 267 SIVVVGSQSSGKSSVLEAI 285
                 479***************9 PP

  == domain 3  score: 4.5 bits;  conditional E-value: 0.0079
      AAA_15 176 leeslkkee...........elknvlksaiiklllisakRnvsdedsekkssllgklkekileealqekl...eeelteklkeiqeklkeidkklaeel 260
                  +++++ +             ++n+ k++i  l++ ++k+   +++ ++++s l+ + ++++ ++ +++l   e  + e+l+ ++ ++ke+++kl++++
  EPX71054.1 492 ERSYFSAHPefrelpvlpmlGIQNLRKNLIHVLEYTMSKN--LQYTADSIRSELDDCSYQYKVQY-NDRLltaESYIAENLDVLKAAFKELSQKLDKNE 587
                 4445555557777777777778888888888888888875..56677777777777777777764.455569999999*****************8888 PP

      AAA_15 261 k.....kilkkkidkikkfnykgkkneeieik.............ddeelplnknGsG 300
                       ++l++ki ++  + y   +n ++ +k             d   + l+++G+G
  EPX71054.1 588 VrallkETLNEKILDLLAERYWMDQNILDWTKqsrtvdehwqyklDSCVSMLTRMGLG 645
                 7888889999999998888888877777766666666666665555555555555555 PP

  == domain 4  score: -2.8 bits;  conditional E-value: 1.3
      AAA_15 132 s 132
                  
  EPX71054.1 750 L 750
                 2 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (905 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       931  (0.051927); expected 358.6 (0.02)
Passed bias filter:                      497  (0.0277205); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.81u 0.32s 00:00:01.13 Elapsed: 00:00:00.50
# Mc/sec: 5486.42
//
Query:       EPX71055.1  [L=209]
Description: TRAPP complex subunit Trs31 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.5e-46  156.2   0.1    5.6e-46  155.9   0.1    1.1  1  TRAPP     Transport protein particle (TRAPP) component


Domain annotation for each model (and alignments):
>> TRAPP  Transport protein particle (TRAPP) component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  155.9   0.1   3.1e-50   5.6e-46       1     145 [.      46     197 ..      46     198 .. 0.95

  Alignments for each domain:
  == domain 1  score: 155.9 bits;  conditional E-value: 3.1e-50
       TRAPP   1 fafllgelvsylqrdskdveevekrLekmGyrvGlrllelllarer.p.retdilevlkfickdlWkllfgkqidnlktn..hrgeyvltdnefpltrf 95 
                 fafl++el++ +q++++ ++e+e++L+++GyrvG+rl+el++ rer p re +il++l++i+++lWk+lfg+ +d+l+++   ++ey+++dn++++++f
  EPX71055.1  46 FAFLFSELIQRIQSQVSGIQEFEEKLNEHGYRVGQRLVELVIWRERnPrREIRILNILQYIHSTLWKYLFGRHADSLEKSkeTEDEYMIVDNNPLFNKF 144
                 89******************************************9863499*****************************555566************* PP

       TRAPP  96 velpke...lsylaflcGiirGaLenlgfpakVtahelpsdelrgrttfeikv 145
                 +++pke   l+++a+l+Gi++G+L++++fp+k +ah++p  ++ +rt+++ik+
  EPX71055.1 145 ISVPKEmsqLNCCAYLAGIVEGFLDSAQFPCKASAHTVPLAQHTQRTVILIKL 197
                 ******87777****************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       764  (0.0426125); expected 358.6 (0.02)
Passed bias filter:                      600  (0.0334653); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 1427.29
//
Query:       EPX71056.1  [L=674]
Description: glycerol-3-phosphate O-acyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-12   47.4   0.0    1.6e-11   44.0   0.0    2.4  1  Acyltransferase  Acyltransferase


Domain annotation for each model (and alignments):
>> Acyltransferase  Acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.0   0.0   8.9e-16   1.6e-11       4     125 ..      27     238 ..      24     248 .. 0.89

  Alignments for each domain:
  == domain 1  score: 44.0 bits;  conditional E-value: 8.9e-16
  Acyltransferase   4 vtglenlpekgpailvaN.Hqsy.lDvlllwlllyksngprnvviiakkellsipllgflmrllgfifidR....................... 72 
                       +g  ++p+kgp+ilva  H    +D+l+l+l l ++ ++r++ ++++++  + +++g ++r++g+i+++R                       
       EPX71056.1  27 TRGAFRVPRKGPIILVAApHANQfVDPLILMLQLRRE-VNRRTSTLVAAKSHRQKIIGIFSRAFGAIPVERaqdlakrgkgkiyvvpdgdqsei 119
                      556667999***999875499989********99444.5777777777777888**************************************** PP

  Acyltransferase  73 .............................................................ksnaraagsleniselleegklvviFPEGtrsr 105
                                                                                     + ++a++ ++++++l eg  + iFPEG+   
       EPX71056.1 120 hgidteftnhrlgdtiilpnnsgsthiasiesdtlirvkrefreeaavrmlhspegctykvAPEVNQATVFDKVRQRLVEGACIAIFPEGGSHD 213
                      ************************************************************977777899999**99****************** PP

  Acyltransferase 106 egellpfkkGlvrlaakak.....k 125
                        e+lp k+G++ +a+++       
       EPX71056.1 214 RPEMLPLKAGVAIMALETLsqnpdC 238
                      ****************998444333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (674 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       665  (0.0370907); expected 358.6 (0.02)
Passed bias filter:                      537  (0.0299515); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.26s 00:00:00.90 Elapsed: 00:00:00.44
# Mc/sec: 4626.62
//
Query:       EPX71057.1  [L=146]
Description: DNA-directed RNA polymerase I complex subunit Ker1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
      0.024   13.5  11.7      0.028   13.3  11.7    1.2  1  NARP1         NMDA receptor-regulated protein 1
      0.076   13.7   6.2       0.36   11.6   0.2    3.3  2  RNA_polI_A14  Yeast RNA polymerase I subunit RPA14
      0.083   11.0   4.0      0.097   10.7   4.0    1.0  1  DUF2126       Putative amidoligase enzyme (DUF2126)
        3.9    6.1  10.5        4.2    6.0  10.5    1.1  1  Presenilin    Presenilin
        7.2    4.4   6.2        6.7    4.5   6.2    1.1  1  V_ATPase_I    V-type ATPase 116kDa subunit family
        9.3    5.4   7.3        9.6    5.3   7.3    1.1  1  Zip           ZIP Zinc transporter


Domain annotation for each model (and alignments):
>> NARP1  NMDA receptor-regulated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3  11.7   9.4e-06     0.028     388     443 ..      89     142 ..      52     146 .] 0.74

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 9.4e-06
                 H-TTGGG---HHHHHT-S-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--...... CS
       NARP1 388 dkpkakeeekeeaksaelseaerkklrkkakkaekkaekeeaekaekekekkaaek 443
                 + p++k++ +e  ++++ls++erk+l+k +kk ++++++e+ ++ +++++k+++++
  EPX71057.1  89 EAPSKKHSREE--DTSALSKEERKRLKKEQKKLARREKEESRKAGQEKEQKEDENN 142
                 44555554444..6789999999999999988888877777776665555443322 PP

>> RNA_polI_A14  Yeast RNA polymerase I subunit RPA14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.2   0.00012      0.36       4      43 ..       8      47 ..       5      60 .. 0.67
   2 ?   -0.8   1.8      0.86   2.6e+03      63      63 ..     109     109 ..      70     144 .. 0.58

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00012
  RNA_polI_A14  4 vihvkssqhvskeevekfLteFIdekEssaselageesst 43
                  +i  +++++++k++ ++fL+ ++ + E+  +e++g+es  
    EPX71057.1  8 TIALRKTTKLDKDQSLNFLEGYVRKIEQFQDEKSGSESVL 47
                  6777777888888888888888888887666666655543 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.86
  RNA_polI_A14  63 L 63 
                    
    EPX71057.1 109 R 109
                   1 PP

>> DUF2126  Putative amidoligase enzyme (DUF2126)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   4.0   3.2e-05     0.097     210     318 ..      19     127 ..       8     144 .. 0.63

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 3.2e-05
     DUF2126 210 lekglekpvgyvlPlkreeekeakwksekwklrrerlvlvpGdsplGlRlPldslplveeeeleaeveed..pleereelpe.........eaaeaeee 297
                  +++l+   gyv  +++ +++++  +s   +l r  ++l   d pl    P++ +p ++e ++e+  +++  p +++++ ++         +       
  EPX71057.1  19 KDQSLNFLEGYVRKIEQFQDEKSGSESVLSQLTRVLMYLRGEDVPLLASNPVNEIPSTKEVDEETPSKQEeaPSKKHSREEDtsalskeerK------- 110
                 467899999***********999999******************************999877655554440044444444443333322210....... PP

     DUF2126 298 eekeekekakeeeeekekeke 318
                     + +k++++ +++eke++
  EPX71057.1 111 ----RLKKEQKKLARREKEES 127
                 ....11111111111111111 PP

>> Presenilin  Presenilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0  10.5    0.0014       4.2     239     310 ..      79     139 ..      44     146 .] 0.30

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0014
  Presenilin 239 eeaekkkeeasesskeeeseeesseksaqsseseeeseeesseaessaeesseekeseessesseeeeeeee 310
                  ++e+ +++++  sk++++ee   ++sa s+e++++ ++e+++ +++++e+s+++ +e+++++        +
  EPX71057.1  79 VDEETPSKQEEAPSKKHSREE---DTSALSKEERKRLKKEQKKLARREKEESRKAGQEKEQKE--------D 139
                 111111111111111111111...111111111111111111111111111111111111111........1 PP

>> V_ATPase_I  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   6.2    0.0023       6.7     647     695 ..      86     139 ..      17     146 .] 0.47

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.0023
  V_ATPase_I 647 kkeeee.....eeeeeeeeeeeeeeeeaeeeeeeeeeeeeeeeeeeeeeeeeee 695
                 k+ee+      +ee++++ ++ee+++ ++e+++ +++e+ee++++ +e+e++e+
  EPX71057.1  86 KQEEAPskkhsREEDTSALSKEERKRLKKEQKKLARREKEESRKAGQEKEQKED 139
                 222111222211111111111111111111111111111111111111111211 PP

>> Zip  ZIP Zinc transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   7.3    0.0032       9.6     107     176 ..      77     139 ..      33     146 .] 0.52

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0032
         Zip 107 kektpkkasssssesaakksvsndkveeseekedhvaeadtdadskeelrngkqeksesekeqaseeedk 176
                 ke  +++ s++++++++k+s ++d++  s+e ++       ++++k+  r++k+e+ + ++e+++  +++
  EPX71057.1  77 KEVDEETPSKQEEAPSKKHSREEDTSALSKEERKR-----LKKEQKKLARREKEESRKAGQEKEQ--KED 139
                 33444444444444444444544444444443332.....2222222223333333333333222..221 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2690  (0.150036); expected 358.6 (0.02)
Passed bias filter:                      777  (0.0433376); expected 358.6 (0.02)
Passed Vit filter:                       163  (0.00909142); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.40
# Mc/sec: 1082.27
//
Query:       EPX71058.1  [L=526]
Description: linear element associated protein Hop1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00056   19.7  12.6    0.00099   18.9  12.6    1.4  1  PHD       PHD-finger
  ------ inclusion threshold ------
       0.26   10.9   7.4       0.53    9.9   7.4    1.5  1  PHD_2     PHD-finger


Domain annotation for each model (and alignments):
>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9  12.6   1.1e-07   0.00099       2      49 ..     335     380 ..     334     383 .. 0.93

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 1.1e-07
                 BTTTTSTTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSSTBSSTTT CS
         PHD   2 CavCkkksdeeeelvqCdgCkrwfHqkClkppleseekpegewlCekC 49 
                 C  C++ + ee ++  Cd+C+ w H  C++++ +s++++ +  lC +C
  EPX71058.1 335 C-ECGD-TSEELDMFECDSCNGWIHCCCYGFESDSDPRQPSTLLCYTC 380
                 7.8999.999************************9999999999*999 PP

>> PHD_2  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   7.4   5.9e-05      0.53       7      35 ..     349     380 ..     346     381 .. 0.91

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 5.9e-05
       PHD_2   7 CdkCsvaVHasCYGvskesdgee...WlCrrC 35 
                 Cd+C+  +H  CYG++++sd  +    lC  C
  EPX71058.1 349 CDSCNGWIHCCCYGFESDSDPRQpstLLCYTC 380
                 *******************9988888999888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (526 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       875  (0.0488036); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.39
# Mc/sec: 4067.98
//
Query:       EPX71059.1  [L=754]
Description: F-box/WD repeat protein Pop1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.5e-33  113.6  15.7      2e-05   25.3   0.1    7.7  7  WD40         WD domain, G-beta repeat
    6.6e-10   38.7   0.9    1.5e-09   37.6   0.9    1.7  1  F-box-like   F-box-like
    7.2e-09   35.3   2.1    2.2e-08   33.7   2.1    1.9  1  F-box        F-box domain
    1.1e-07   32.0   3.8       0.25   11.7   0.1    5.5  6  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    6.7e-06   25.0   6.3       0.59    8.7   0.1    5.0  5  Nup160       Nucleoporin Nup120/160
    0.00011   21.6   0.2      0.036   13.4   0.1    3.1  4  WD40_like    WD40-like domain
  ------ inclusion threshold ------
      0.028   14.3   0.1      0.082   12.8   0.1    1.8  1  F-box_4      F-box
      0.029   14.9   1.6        7.5    7.2   0.1    4.0  3  PQQ_3        PQQ-like domain
      0.032   13.7   0.1         11    5.3   0.0    3.5  2  DUF5046      Domain of unknown function (DUF5046)


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.058   1.2e+02       6      29 ..     385     410 ..     379     417 .. 0.75
   2 !   19.0   0.0   9.2e-07    0.0018       3      38 .]     423     457 ..     421     457 .. 0.81
   3 !   22.1   0.1     1e-07    0.0002       1      37 [.     461     516 ..     461     517 .. 0.79
   4 !   24.2   0.0   2.2e-08   4.4e-05       4      37 ..     548     580 ..     546     581 .. 0.87
   5 !   25.3   0.1   9.8e-09     2e-05       1      38 []     585     623 ..     585     623 .. 0.95
   6 !   16.3   0.1   6.9e-06     0.014       2      38 .]     628     665 ..     627     665 .. 0.71
   7 !    7.8   0.0    0.0032       6.4       2      38 .]     670     703 ..     669     703 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.058
                 EEESS.SS.EEEEEEETTSSEEEEEE CS
        WD40   6 tltGH.ss.vtslafspdgawlasGs 29 
                 ++  H  + +t ++f++d+  ++++s
  EPX71059.1 385 SFPVHgVDlITKVQFDDDKIVVSTCS 410
                 34578644799999******998886 PP

  == domain 2  score: 19.0 bits;  conditional E-value: 9.2e-07
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++r+l+ H + v+ +     g+ l++Gs D+t+r+Wd
  EPX71059.1 423 LIRSLEEHeGQVWTF--EYVGDTLVTGSTDRTIRVWD 457
                 689999997779988..55566699***********9 PP

  == domain 3  score: 22.1 bits;  conditional E-value: 1e-07
                 TEEEEEEESS.SSEEEEE...............EETTSSE........EEEEETTSEEEEE CS
        WD40   1 gqclrtltGH.ssvtsla...............fspdgaw........lasGsdDgtvriW 37 
                 g+c +++ GH s +++++               +              ++s+s+D+t+r+W
  EPX71059.1 461 GECKQVFHGHrSTIRCIKivcknnrnadtsdkaN-----NsdslmppyVVSSSRDCTIRLW 516
                 6899******999*****9999666665544443.....155566998999********** PP

  == domain 4  score: 24.2 bits;  conditional E-value: 2.2e-08
                 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 lrtl+GH +s++ +    +g+ ++s+s+DgtvriW
  EPX71059.1 548 LRTLRGHtDSIREV--ACEGDTIVSASYDGTVRIW 580
                 89*****8889877..55999999*********** PP

  == domain 5  score: 25.3 bits;  conditional E-value: 9.8e-09
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 g cl++l+GH + v+s+a ++ g+  +s++ D ++riWd
  EPX71059.1 585 GACLHVLRGHlGRVYSVAIDSTGKRCMSAGLDAKIRIWD 623
                 57********999************999999*******9 PP

  == domain 6  score: 16.3 bits;  conditional E-value: 6.9e-06
                 EEEEEEESSSS.EEEEEEETTSSEEEEEET..TSEEEEEE CS
        WD40   2 qclrtltGHss.vtslafspdgawlasGsd..DgtvriWd 38 
                  ++rtl GHss v+ +     +++l+s+s   D+++r+Wd
  EPX71059.1 628 ALIRTLNGHSSlVSQV--TLKNDYLVSASAspDNSLRVWD 665
                 5799*****7766555..22555676666556*******9 PP

  == domain 7  score: 7.8 bits;  conditional E-value: 0.0032
                 EEEEEEESSSSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGHssvtslafspdgawlasGsdDgtvriWd 38 
                 +cl +l+    + ++ f++d + ++sGs ++++ +Wd
  EPX71059.1 670 KCLCVLKCP--IGHIFFQHDENKIISGS-KNKLQLWD 703
                 566666654..66777999999999***.*******9 PP

>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.6   0.9   7.5e-13   1.5e-09       3      48 .]     288     333 ..     286     333 .. 0.94

  Alignments for each domain:
  == domain 1  score: 37.6 bits;  conditional E-value: 7.5e-13
  F-box-like   3 rLPdEiLlqIFsyLppsdLlrlalVCrrWrrvaldtplLWrrlvlr 48 
                 + P+Ei   ++syL++s+L++++ VCr+W r++++  ++W++l++r
  EPX71059.1 288 DFPPEISRIVLSYLDASSLCAVSKVCRSWSRMVSHSDEFWKNLFIR 333
                 56*******************************9999******986 PP

>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.7   2.1   1.1e-11   2.2e-08       3      40 ..     286     323 ..     284     330 .. 0.91

  Alignments for each domain:
  == domain 1  score: 33.7 bits;  conditional E-value: 1.1e-11
                 HHHS-HHHHHHHHHTS-HHHHHHHCTT-HHHHHHHTTH CS
       F-box   3 lsrLPsevlrhILerLplsdllalrrVSkgwrilidsd 40 
                 ls+ P+e+ r +L++L+ s+l+a ++V+++w +++ + 
  EPX71059.1 286 LSDFPPEISRIVLSYLDASSLCAVSKVCRSWSRMVSHS 323
                 89*******************************99865 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       4.9   9.7e+03      25      37 ..      76      88 ..      70      98 .. 0.66
   2 ?    1.2   0.0      0.23   4.6e+02      49      84 ..     400     434 ..     393     440 .. 0.79
   3 ?    5.1   0.0     0.014        27      47      88 ..     438     478 ..     433     482 .. 0.88
   4 !    5.7   0.0    0.0091        18      49      77 ..     564     592 ..     552     598 .. 0.88
   5 !   11.7   0.1   0.00013      0.25      10      87 ..     568     643 ..     566     648 .. 0.86
   6 !    7.4   0.1    0.0027       5.3      28      91 ..     662     727 ..     655     728 .. 0.77

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 4.9
  ANAPC4_WD40 25 ngqrvwtleedke 37
                 + ++vwt++e+ke
   EPX71059.1 76 SNEKVWTFTENKE 88
                 6789999955444 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.23
  ANAPC4_WD40  49 dgklLavaysdgevrlldaesgkvvhslsvksekav 84 
                  d+  ++v++   ++++++ ++g +++sl+ ++ + v
   EPX71059.1 400 DDDKIVVSTCSPNINVYSTKTGALIRSLEEHEGQ-V 434
                  5666778888889**************9998874.4 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.014
  ANAPC4_WD40  47 kpdgklLavaysdgevrlldaesgkvvhslsvksekavtclg 88 
                  +  g  L+ +  d ++r+ d  +g++ + ++ +++ ++ c++
   EPX71059.1 438 EYVGDTLVTGSTDRTIRVWDLRTGECKQVFHGHRS-TIRCIK 478
                  556999**********************9999988.599986 PP

  == domain 4  score: 5.7 bits;  conditional E-value: 0.0091
  ANAPC4_WD40  49 dgklLavaysdgevrlldaesgkvvhsls 77 
                  +g  ++ a  dg+vr+  a++g ++h l+
   EPX71059.1 564 EGDTIVSASYDGTVRIWRASTGACLHVLR 592
                  688999*******************9875 PP

  == domain 5  score: 11.7 bits;  conditional E-value: 0.00013
  ANAPC4_WD40  10 iAlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtcl 87 
                  i  a+ dg +++ R +     ++   ++ ++v s+a    gk  + a  d ++r+ d+e+g ++++l+ +s+  v+ +
   EPX71059.1 568 IVSASYDGTVRIWRASTGACLHV-LRGHLGRVYSVAIDSTGKRCMSAGLDAKIRIWDVETGALIRTLNGHSSL-VSQV 643
                  66678889999999998888888.5778899************************************999885.6665 PP

  == domain 6  score: 7.4 bits;  conditional E-value: 0.0027
  ANAPC4_WD40  28 rvwtl....eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWge 91 
                  rvw++      +  +  + ++ +++d++ +  + s+++++l d+ sgk+v+ l ++ ++ +  +g++e
   EPX71059.1 662 RVWDTksekCLCVLKCPIGHIFFQHDENKIISG-SKNKLQLWDIRSGKLVRDLLTELDS-IWQVGYNE 727
                  677774433334567888999999999998665.789**************99888874.88888776 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.1    0.0007       1.4     231     255 ..     442     466 ..     435     516 .. 0.84
   2 !    4.3   0.0    0.0062        12     229     254 ..     564     589 ..     550     595 .. 0.84
   3 ?    3.3   0.0     0.013        25     238     255 ..     615     632 ..     610     636 .. 0.87
   4 !    8.7   0.1   0.00029      0.59     222     258 ..     640     677 ..     634     699 .. 0.75
   5 ?   -1.9   0.0       0.5     1e+03     240     254 ..     697     711 ..     692     718 .. 0.87

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0007
                 TEEEEEETT-EEEEEETTTTEEEEE CS
      Nup160 231 tylfalsrdgkLrvWnlltgkclat 255
                 ++l++ s d+++rvW+l+tg c  +
  EPX71059.1 442 DTLVTGSTDRTIRVWDLRTGECKQV 466
                 5788899*************99665 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.0062
                 TTTEEEEEETT-EEEEEETTTTEEEE CS
      Nup160 229 gqtylfalsrdgkLrvWnlltgkcla 254
                 + ++++++s dg++r+W  +tg cl 
  EPX71059.1 564 EGDTIVSASYDGTVRIWRASTGACLH 589
                 67899*****************9986 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.013
                 TT-EEEEEETTTTEEEEE CS
      Nup160 238 rdgkLrvWnlltgkclat 255
                 +d k+r+W+++tg +++t
  EPX71059.1 615 LDAKIRIWDVETGALIRT 632
                 899**********99988 PP

  == domain 4  score: 8.7 bits;  conditional E-value: 0.00029
                 ET.....TTTEEEEEET..T-EEEEEETTTTEEEEEEE- CS
      Nup160 222 avavveigqtylfalsr..dgkLrvWnlltgkclatidl 258
                 +++v+  +++yl+++s   d+ LrvW++++ kcl +  +
  EPX71059.1 640 VSQVTL-KNDYLVSASAspDNSLRVWDTKSEKCLCVLKC 677
                 444444.888887655433**************977665 PP

  == domain 5  score: -1.9 bits;  conditional E-value: 0.5
                 -EEEEEETTTTEEEE CS
      Nup160 240 gkLrvWnlltgkcla 254
                 +kL++W++++gk+++
  EPX71059.1 697 NKLQLWDIRSGKLVR 711
                 89*********9986 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.1   1.8e-05     0.036      50     129 ..     398     479 ..     389     503 .. 0.87
   2 ?    2.1   0.0      0.05        99       3      53 ..     598     647 ..     596     655 .. 0.80
   3 ?    2.8   0.0     0.031        61     237     293 ..     638     694 ..     632     702 .. 0.81
   4 ?    0.5   0.0      0.15   3.1e+02     261     293 ..     663     694 ..     647     733 .. 0.59

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1.8e-05
   WD40_like  50 lldddlilvvtlDGtillslleneeeven.ekieedistvkviddklliGtnkGsiyvfskdl.qleevllgqsseIkeiki 129
                 + ddd+i+v t   +i  +  + +  +++ e+ e ++ t ++++d l+ G++  +i v++    ++++v+ g+ s I+ iki
  EPX71059.1 398 QFDDDKIVVSTCSPNINVYSTKTGALIRSlEEHEGQVWTFEYVGDTLVTGSTDRTIRVWDLRTgECKQVFHGHRSTIRCIKI 479
                 5699*********************88762677789*********************976543279************9987 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.05
   WD40_like   3 iYsidiskkgslilyGgkddkctvlkleslesvsivesfedSvifvklldd 53 
                 +Ys+ i+  g+  +  g d k+++ ++e++ ++  +++ +  v  v  l++
  EPX71059.1 598 VYSVAIDSTGKRCMSAGLDAKIRIWDVETGALIRTLNGHSSLVSQV-TLKN 647
                 9*******************************99998876544433.3444 PP

  == domain 3  score: 2.8 bits;  conditional E-value: 0.031
   WD40_like 237 egiskikkisefvvafsT.lcgkvgigDiRdketfkllesgvGviydmkfenntiyvg 293
                 + +s++   +++ v  s   ++ + + D ++++ + +l++ +G i+ ++  +n+i+ g
  EPX71059.1 638 SLVSQVTLKNDYLVSASAsPDNSLRVWDTKSEKCLCVLKCPIGHIF-FQHDENKIISG 694
                 66888888899999877515899**********************9.77788877665 PP

  == domain 4  score: 0.5 bits;  conditional E-value: 0.15
   WD40_like 261 igDiRdketfkllesgvGviydmkfenntiyvg 293
                 + D ++++ + +l++ +G i+ ++  +n+i+ g
  EPX71059.1 663 VWDTKSEKCLCVLKCPIGHIF-FQHDENKIISG 694
                 556666666666666666666.44444444433 PP

>> F-box_4  F-box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   4.1e-05     0.082       2      37 ..     283     318 ..     282     324 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 4.1e-05
     F-box_4   2 edsLssLPlevlqhiaslLDsfsLsqLslvskllre 37 
                 +d Ls++P e+ + ++s+LD  sL+ +s+v+++   
  EPX71059.1 283 KDFLSDFPPEISRIVLSYLDASSLCAVSKVCRSWSR 318
                 5789***************************98655 PP

>> PQQ_3  PQQ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.1    0.0038       7.5      19      40 .]     439     460 ..     384     460 .. 0.91
   2 ?    3.6   0.0      0.05        99      15      36 ..     559     580 ..     549     584 .. 0.79
   3 ?   -0.9   0.0       1.3   2.6e+03      11      39 ..     637     667 ..     620     668 .. 0.58

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0038
       PQQ_3  19 vdgglvyvgtgdGtlyAlDaet 40 
                 ++g+++++g++d t++  D +t
  EPX71059.1 439 YVGDTLVTGSTDRTIRVWDLRT 460
                 78*****************998 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.05
       PQQ_3  15 sspavdgglvyvgtgdGtlyAl 36 
                 + +a  g++++ +++dGt++  
  EPX71059.1 559 REVACEGDTIVSASYDGTVRIW 580
                 567899************9855 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 1.3
       PQQ_3  11 gpvnsspavdgglvyvgtg..dGtlyAlDae 39 
                 + ++s++++ +++++ ++   d++l+  D++
  EPX71059.1 637 SSLVSQVTLKNDYLVSASAspDNSLRVWDTK 667
                 2333444777888888887888888888765 PP

>> DUF5046  Domain of unknown function (DUF5046)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0      0.02        40      84     116 ..     394     426 ..     387     434 .. 0.88
   2 ?    5.3   0.0    0.0056        11      31     116 ..     546     632 ..     539     647 .. 0.65

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.02
     DUF5046  84 vydvdardktvavyatdgilrvydkttGalltd 116
                 + +v  +d+++ v +    + vy+ +tGal+  
  EPX71059.1 394 ITKVQFDDDKIVVSTCSPNINVYSTKTGALIRS 426
                 568999***********************9865 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.0056
     DUF5046  31 yelidlasted..sellatfdrsvstyaPGavvlwnsgedsryelidletGektpvy..dvdardktvavyatdgilrvydkttGalltd 116
                 y l+ l +  d  +e+ +  d  vs    G+v +w +  +   ++     G    vy   +d + k      +d  +r++d +tGal+  
  EPX71059.1 546 YYLRTLRGHTDsiREVACEGDTIVSASYDGTVRIWRASTGACLHVL---RGHLGRVYsvAIDSTGKRCMSAGLDAKIRIWDVETGALIRT 632
                 4555554433312567777777777778888888888776654444...35555555335677777777788888888888888888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (754 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       809  (0.0451224); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.67u 0.26s 00:00:00.93 Elapsed: 00:00:00.43
# Mc/sec: 5231.67
//
Query:       EPX71060.1  [L=305]
Description: beta-glucosidase Psu2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.6e-91  303.7  20.7    9.9e-91  303.5  20.7    1.0  1  SUN       Beta-glucosidase (SUN family)


Domain annotation for each model (and alignments):
>> SUN  Beta-glucosidase (SUN family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  303.5  20.7   5.5e-95   9.9e-91       1     245 []      45     292 ..      45     292 .. 0.95

  Alignments for each domain:
  == domain 1  score: 303.5 bits;  conditional E-value: 5.5e-95
         SUN   1 dgkikCsefps.deglvavdalglgGwagiqdvkge...sqeCkegsyCsyaCppGylktqwpsaqgatgssvGGLyCnkdGklektnkdskklCekga 95 
                 dg ++Cs+fp+ ++g+v++d+lg+gGw+g+q+++g+   +++C++++yCsyaC+pG++ktqwps+q+++g+svGGLyC k+Gkl+kt+k+s++lCe+++
  EPX71060.1  45 DGVYDCSHFPEdQDGVVKLDYLGFGGWSGVQKNDGKfgtASTCEDNTYCSYACKPGMSKTQWPSNQPSNGESVGGLYC-KNGKLYKTQKNSNNLCENSH 142
                 57899*****73679*****************9988877899************************************.7******************* PP

         SUN  96 gkvkvknklsksvavCrTdyPGtEamlipteveagssaelavpdedtyykwkgkktsaqYYvNkaGvsvedaCvWgseskpvGNwaplvlGagkdedgk 194
                 g+++vkn+l+++va+CrTdyPGtE+m +pt++ +gs+++l+v+ded+yy+w +kktsaqYYvNk+G s++daCvWg++++++GNwapl++G+g+++ gk
  EPX71060.1 143 GNAYVKNTLGSNVAICRTDYPGTENMNVPTDIGSGSQQPLSVVDEDNYYNWGNKKTSAQYYVNKSGKSAQDACVWGNQGDDYGNWAPLNFGSGYTD-GK 240
                 ***********************************************************************************************9.** PP

         SUN 195 tylsifqNp.tskeklnfnvkieaeegdsvsgkCkyesgklskg.ggadgCtv 245
                  +ls+ +Np +s+++++++++i+a+ g++ s +Ckye+g+++++ +++dgCtv
  EPX71060.1 241 MWLSMSKNPlNSQANVDYKITIKAD-GGTLSHDCKYENGSFHGSgASSDGCTV 292
                 ********8466899*******775.666*************88678*****8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (305 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       500  (0.0278878); expected 358.6 (0.02)
Passed bias filter:                      267  (0.0148921); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 2166.91
//
Query:       EPX71061.1  [L=411]
Description: mannose-6-phosphate isomerase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   2.5e-116  389.0   0.0     3e-116  388.7   0.0    1.0  1  PMI_typeI     Phosphomannose isomerase type I
    0.00039   20.1   0.0       0.24   11.1   0.0    2.3  2  Cupin_2       Cupin domain
  ------ inclusion threshold ------
      0.074   12.3   0.5       0.19   11.0   0.5    1.6  1  ATLF          Anthrax toxin lethal factor, N- and C-terminal 
       0.13   12.2   0.0         13    5.6   0.0    2.3  2  AraC_binding  AraC-like ligand binding domain


Domain annotation for each model (and alignments):
>> PMI_typeI  Phosphomannose isomerase type I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  388.7   0.0  6.6e-120    3e-116       1     368 [.       1     370 [.       1     374 [. 0.91

  Alignments for each domain:
  == domain 1  score: 388.7 bits;  conditional E-value: 6.6e-120
                 EEEEEEEEEE-TTBEECGGSHHHHHHHHH-TT...TTSCEEEEEEC--TTS-EECTTTC.CCCHCHHHHHHHTGHHHCCHHTSS-SEEEEEEEESS--- CS
   PMI_typeI   1 lfkLqcgvqnyaWGkiGsesalakllaasdPs.ieedkpyaElWmgtHpkgpskvlnkk.lkdvvlkellaelresvgkkfgeelpfLfKvLsvekvlS 97 
                 +++L+c+v +y+WG++G +s +a+++ +     ++e+kpyaElWmg+ p+ ps+v+++    d++l    +++++++ +k+g++lpfLfKvLs+ kvlS
  EPX71061.1   1 MYRLKCQVMEYDWGRVGNNSLAAQFAKNGSGFeVNEEKPYAELWMGSYPSCPSTVIQTGqSLDKILTP--ETMGQKIYEKYGNQLPFLFKVLSIDKVLS 97 
                 789**************5555555555544448*********************87765477777776..89*************************** PP

                 EEE---HHHHHHHHHH.TCCCHCCCTTTEEEEESS.EEEEEEE..HHHHHHHCCCEHCCHCCCECCHHCCHHHHHHCCHTTSHHHHCCCCHHCCHCHCC CS
   PMI_typeI  98 iqvHPdKklaeilhaadpknYpddNhkpElaiAltdFeglcgfrpleeiveflkkvselaeligeetaksleelvslieagdpealkkkkvlqklFssl 196
                 +q+HPdKkla+ lha+dp+nY+ddNhkpE+a+Alt+F+glcgfr+ e+iv+flk++++l+e +gee+a ++e+  + +e         k +l+klF  +
  EPX71061.1  98 LQAHPDKKLAKELHANDPENYKDDNHKPEMALALTQFQGLCGFRQGEQIVSFLKNIPPLREFVGEEAAVEFEKEYKKNE---------KDALRKLFDVM 187
                 ************************************************************************9998888.........34578****** PP

                 CTTTHHCCCHCCCCCCCCCCC-H.....HHCCCC-HHHHCCHCHHHSTTTTCHCH.TTEEEEEE.TT.EECCHCCHHCECCEEEEEEEEES-EEEEECC CS
   PMI_typeI 197 lnsekekikqklallveriqssd.....aevnktdlaelidrlneqyPddiGlfa.llLNlvkLnpGEAmflkandphaylsGdivecmaasdnvvRaG 289
                 +n +++k+++ + +lv+ +++ d     + +   dl+ li rln qyP+diGlf  l+LN+v L+pGE +fl+a dphay+ G+i+ecma+sdnv+R G
  EPX71061.1 188 MNNDNDKLEKYAPKLVQFAKDTDedfggKPFGGHDLSALILRLNSQYPNDIGLFItLILNHVDLKPGESIFLRALDPHAYIAGNIIECMASSDNVIRSG 286
                 *****************999998455544556677**************************************************************** PP

                 CECCEEECHCCHCH.EEEEEECCCCEE--BS.CEECE...EEEEEECCCCECCEEECCC.TTEEEEE-TTS-EEEEEEECEEEE CS
   PMI_typeI 290 lTpKfidvkelvemltYkykpsdelklqqte.sllda...svlydppieefavektklk.kgeatilplesasiliaveGtati 368
                 +T Kf+d  +l++ ltY+   +d +++ ++  ++ ++   +v+y+ppieef++ +t+l  ++++ti   +++sili+veG++ +
  EPX71061.1 287 FTSKFKDKGTLIKSLTYETGTADDQLTRPVPfPKAHGtgkTVVYKPPIEEFNILQTTLApEQSQTIRDITGPSILIVVEGNGLL 370
                 ***************************98875333336689***************999899******************9866 PP

>> Cupin_2  Cupin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.0    0.0014       6.4      38      58 ..     248     268 ..     242     272 .. 0.89
   2 !   11.1   0.0   5.3e-05      0.24      22      56 ..     360     395 ..     342     406 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0014
                 EEEEETTEEEEE-TT-EEEEE CS
     Cupin_2  38 eveleaGdsvyfpagtpHrfr 58 
                  v+l++G+s++  a  pH+++
  EPX71061.1 248 HVDLKPGESIFLRALDPHAYI 268
                 689****************97 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 5.3e-05
                 EEEEEESEEEEE.ECTEEEEEETTEEEEE-TT-EEE CS
     Cupin_2  22 ffyVleGegelt.vdgeeveleaGdsvyfpagtpHr 56 
                 +++V+eG g l+  +g +  +++G ++++ a+ p +
  EPX71061.1 360 ILIVVEGNGLLKgENGDTASISPGFVFFISANYPLT 395
                 789****************************98755 PP

>> ATLF  Anthrax toxin lethal factor, N- and C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.5   4.3e-05      0.19     163     213 ..     161     210 ..     145     213 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 4.3e-05
                 SSSSSCTCCCCTHHHHHHHHHHHHHHHHSSSHHHHHHHHSHHHHHHHHHHH CS
        ATLF 163 gsdlsveflkeneaefqevFakaFayyispdhRlvlqlyaPeaFeyinkle 213
                 g++  vef ke + + +++  k F  +++ d  ++l++yaP+  ++  + +
  EPX71061.1 161 GEEAAVEFEKEYKKNEKDALRKLFDVMMNND-NDKLEKYAPKLVQFAKDTD 210
                 566789999999888889**********988.59************98876 PP

>> AraC_binding  AraC-like ligand binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0      0.01        47      42      64 ..     248     270 ..     246     275 .. 0.91
   2 ?    5.6   0.0     0.003        13      26      66 ..     360     401 ..     356     410 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.01
                   EEEE-TT-EEEE-TTS-EEEEE- CS
  AraC_binding  42 tydlgpGdlfLlppgepHdyesd 64 
                   ++dl+pG+ ++l+  +pH y ++
    EPX71061.1 248 HVDLKPGESIFLRALDPHAYIAG 270
                   579*****************986 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.003
                   EEEEEEE-EEE.EETTEEEEE-TT-EEEE-TTS-EEEEE-TT CS
  AraC_binding  26 ihyvteGtgrl.rlngrtydlgpGdlfLlppgepHdyesdse 66 
                   i +v+eG+g l   ng t  ++pG +f++  + p ++ s+s 
    EPX71061.1 360 ILIVVEGNGLLkGENGDTASISPGFVFFISANYPLTISSSSK 401
                   89*********8889999**************9999998885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (411 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       582  (0.0324614); expected 358.6 (0.02)
Passed bias filter:                      523  (0.0291706); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.29s 00:00:00.83 Elapsed: 00:00:00.45
# Mc/sec: 2755.39
//
Query:       EPX71062.1  [L=679]
Description: NatA N-acetyltransferase complex subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-64  218.0   1.8    2.6e-64  218.0   1.8    2.0  2  NARP1       NMDA receptor-regulated protein 1
    4.3e-10   38.9  19.4     0.0053   16.8   0.1    8.2  9  TPR_2       Tetratricopeptide repeat
    1.1e-08   35.1   4.7       0.05   14.4   0.1    4.8  4  TPR_14      Tetratricopeptide repeat
    2.6e-08   33.3   4.0      0.038   14.0   0.6    4.7  4  TPR_7       Tetratricopeptide repeat
    5.5e-08   32.4   6.4     0.0004   20.0   0.7    5.0  4  TPR_11      TPR repeat
    1.2e-07   32.2   6.1      0.047   14.3   0.3    5.2  5  TPR_16      Tetratricopeptide repeat
    4.9e-07   30.2   5.7       0.33   11.5   0.2    5.5  5  TPR_19      Tetratricopeptide repeat
    9.6e-06   25.8   8.8        0.7   10.2   0.7    5.1  4  TPR_12      Tetratricopeptide repeat
    1.3e-05   24.8  18.5     0.0077   16.0   0.1    5.7  6  TPR_1       Tetratricopeptide repeat
    1.7e-05   24.5   4.0      0.051   13.5   0.4    3.8  4  TPR_10      Tetratricopeptide repeat
    2.6e-05   24.1   8.5      0.018   15.2   0.1    5.0  3  TPR_8       Tetratricopeptide repeat
    5.6e-05   23.2   0.1      0.098   12.8   0.0    3.5  3  TPR_9       Tetratricopeptide repeat
     0.0005   20.2  26.9       0.17   12.1   0.1    5.9  6  ANAPC3      Anaphase-promoting complex, cyclosome, subunit 3
    0.00094   19.4   6.5       0.49   10.9   0.0    5.8  5  TPR_17      Tetratricopeptide repeat
     0.0017   18.9   5.6       0.27   12.0   0.9    5.0  4  TPR_6       Tetratricopeptide repeat
     0.0034   16.6   3.4       0.59    9.3   0.0    3.7  5  TPR_15      Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> NARP1  NMDA receptor-regulated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.1       4.7   5.3e+03      51     219 ..      69     103 ..      60     118 .. 0.60
   2 !  218.0   1.8   2.3e-67   2.6e-64      20     482 ..     199     645 ..     182     673 .. 0.89

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 4.7
                 TT-HHHHHHHHHHHHHH-TT-CHHHHHHHHHT..SSS-HHHHHHHHHHTTTS-TT-SHHHHTHHHH--HHHHHHHHHHHHHHHHHCT-TTHHHHHGGGG CS
       NARP1  51 LgrkeeAeatyeaLlernpenskYyeglekakklskedeeallalydelaekyprsdaprRlpLdfleGeeFkelvdkYlrkaLrkgvPslfanlksLY 149
                 +g +++++  ++aL     + ++Y+++l++ k                                                                   
  EPX71062.1  69 IGLNAKSRFCWQALAITYRDRKDYHSSLNAYK------------------------------------------------------------------- 100
                 55555666666666666666666666665555................................................................... PP

                 GGSCHHHHHHHHHHHHHTTTTTSSSSTTGG.GSS----SSHHHHHHHHHHHHHHHHT-SHHHHHHHHHHH CS
       NARP1 150 edkeKvkileelvegyvkslktsgklsesdnedsekepesallwvlyflAqhydklgsrekAleyidkai 219
                                                                                    +ai
  EPX71062.1 101 -------------------------------------------------------------------NAI 103
                 ...................................................................333 PP

  == domain 2  score: 218.0 bits;  conditional E-value: 2.3e-67
                 HHHHHHHHHHHGGG---HHHHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TT-CHHHHHHHHHT.....SSS.-HHHHHHHHHHTTTS-TT-SHHHHTHH CS
       NARP1  20 leeAlehLeekekqivDklavketkaelllkLgrkeeAeatyeaLlernpenskYyeglekak...klske.deeallalydelaekyprsdaprRlpL 114
                  e+++  ++e+++ i++     e+ a+l+++ ++++eA ++y +L+ + ++  ++  ++ k++    +sk+  ++ l++ ++ l + +p+++  + + L
  EPX71062.1 199 FEDSFRIFQEYSSFILNDWLRYEQLANLYFRFQKYDEALHLYGKLIAKYKDRNDFLWRYLKSLhelIISKGlPKQVLYNKFRCLLDLLPNAMNIKIIIL 297
                 5777888899999999999999******************************999999998885443566635667889999999************** PP

                 HH--..HHHHHHHHHHHHHHHHHCT-TTHHHHHGGGGGGSCHHHHHHHHHHHHHTTTTTSSSSTTGG.GSS----SSHHHHHHHHHHHHHHHHT-SHHH CS
       NARP1 115 dfle..GeeFkelvdkYlrkaLrkgvPslfanlksLYedkeKvkileelvegyvkslktsgklsesdnedsekepesallwvlyflAqhydklgsrekA 211
                 +fl     ++   +++ l  + +kg+Ps    lksL + +        l+  +++++k    ++ ++   ++++ ++a lw  y+l+     + ++  +
  EPX71062.1 298 EFLViaNLDYDFFLQHLLIYSKNKGIPSAILLLKSLIRGN--------LL--LAHKIKDFLIFELQN---TNRDNPTACLWNFYYLSCLTYFTFDYASS 383
                 **97447788889999999999*************97754........33..334455555555444...445667777***********9******** PP

                 HHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHHHHHHHHHHHCTTT-HHHHHHHHHHHHHTT-HHHHHHHHTTTS-TTS.HHHHHHHHTT-HHHHHHH CS
       NARP1 212 leyidkaiehtptlvelyltKarilkhaGdlkkAaevmeearklDlaDRyiNskcakymLradeveeAeetvslFtreev.daledlnemqcmWfeted 309
                 l+ id+ai++ ptl +lyl K++il + G+ ++A++++     lD+ DR + s+ ak  +  de++ A + +s+F ++   +    l+e +c+Wf++ed
  EPX71062.1 384 LHWIDQAISNLPTLPDLYLLKGKILSRLGEWSEAIRTLTFCCDLDRGDRALASRLAKTYFYIDENQLAYQSLSKFCKDRFgGVPIYLAETECIWFLIED 482
                 ******************************************************************************99667789************* PP

                 HHHHHHTT-HHHHHHHHHHHHHHHHHHHHCTTTHHHHHHHHT-HHHHHHHHHHHCTTT-SHHHHHHHHHHHHHHHHHHH-TTGGG---HHHHHT-S-HH CS
       NARP1 310 geaylrqkklglALKrfhavekhFdeieeDqFDFHtyclRkmtlraYvdllrledelrshpfyvkaakgaievYlkledkpkakeeekeeaksaelsea 408
                 ge+ lrq+ +glALKrfh+ +++F+e++   F +Htyc    ++  Y+++  +  +l + p+y + a ga  +Ylkl+++p  k +e+  ++  +++e+
  EPX71062.1 483 GESLLRQQSYGLALKRFHQLYNIFKEWTSISFHYHTYCAENAQFMQYLEMDEWTKTLWDSPAYLRTALGATVIYLKLHESPYFKYGENA-TAVYSMNEN 580
                 ***********************************************************************************999888.56778**** PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHHH--.......-------------S-SSSTTTT-S-HHHHHHHHHTTTG CS
       NARP1 409 erkklrkkakkaekkaekeeaekaekekekkaaekkakkedeeakkededplgekLvkteepLeeAlkflkpLl 482
                 er ++ k + +   k++ +e+++ +k          + +ede++   d+d+lg +L++t++pL+eA+kfl p++
  EPX71062.1 581 ERLQFDKDQNQSMTKLHLQEESRIKKI---------KLDEDEDPFVIDPDLLGMELLETKDPLQEAMKFLYPVR 645
                 *********999999999999955433.........457899999*************************9875 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0      0.46   5.1e+02       3      33 ..      10      40 ..       8      41 .. 0.85
   2 ?    3.5   0.7     0.082        92       1      28 [.      42      69 ..      42      74 .. 0.82
   3 !   16.8   0.1   4.7e-06    0.0053       3      34 .]      78     109 ..      77     109 .. 0.96
   4 ?    0.5   0.0      0.77   8.6e+02      10      26 ..     153     169 ..     152     172 .. 0.84
   5 !   12.9   2.8   8.5e-05     0.096       4      32 ..     220     248 ..     217     250 .. 0.90
   6 ?   -0.7   0.0       1.9   2.1e+03      13      33 ..     376     396 ..     367     397 .. 0.77
   7 ?    6.2   0.0     0.011        13       2      22 ..     399     419 ..     398     428 .. 0.90
   8 ?   -2.8   0.1       8.7   9.7e+03       6      22 ..     437     453 ..     434     457 .. 0.74
   9 ?   -0.3   0.1       1.4   1.5e+03       8      31 ..     483     506 ..     483     509 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.46
       TPR_2  3 alynlGlayyklgdyeeAleafekAleldPn 33
                al+ ++   ++ g++ + l+     l+  P+
  EPX71062.1 10 ALFDRAVNQFEDGHFSRSLKTTLSILKKKPK 40
                899************9999988777777776 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.082
       TPR_2  1 aealynlGlayyklgdyeeAleafekAl 28
                aea    Gl + kl++y +Al  ++ A+
  EPX71062.1 42 AEAIALEGLNLCKLNNYHDALLRCQLAI 69
                6777889*************97777666 PP

  == domain 3  score: 16.8 bits;  conditional E-value: 4.7e-06
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldPnn 34 
                 ++ +l+  y+ ++dy   l+a++ A+++ P+n
  EPX71062.1  78 CWQALAITYRDRKDYHSSLNAYKNAIRISPKN 109
                 699***************************97 PP

  == domain 4  score: 0.5 bits;  conditional E-value: 0.77
       TPR_2  10 ayyklgdyeeAleafek 26 
                 +yy +g ye++l ++  
  EPX71062.1 153 SYYLSGSYERCLSYCTD 169
                 79********9999865 PP

  == domain 5  score: 12.9 bits;  conditional E-value: 8.5e-05
       TPR_2   4 lynlGlayyklgdyeeAleafekAleldP 32 
                 + +l+++y++ ++y+eAl+++ k ++ + 
  EPX71062.1 220 YEQLANLYFRFQKYDEALHLYGKLIAKYK 248
                 678*********************99876 PP

  == domain 6  score: -0.7 bits;  conditional E-value: 1.9
       TPR_2  13 klgdyeeAleafekAleldPn 33 
                    dy+  l++ ++A++  P+
  EPX71062.1 376 FTFDYASSLHWIDQAISNLPT 396
                 567999*********998776 PP

  == domain 7  score: 6.2 bits;  conditional E-value: 0.011
       TPR_2   2 ealynlGlayyklgdyeeAle 22 
                 +++   G+++ +lg++ eA++
  EPX71062.1 399 DLYLLKGKILSRLGEWSEAIR 419
                 678999*************97 PP

  == domain 8  score: -2.8 bits;  conditional E-value: 8.7
       TPR_2   6 nlGlayyklgdyeeAle 22 
                 +l++ y++ ++ + A +
  EPX71062.1 437 RLAKTYFYIDENQLAYQ 453
                 89999999887777755 PP

  == domain 9  score: -0.3 bits;  conditional E-value: 1.4
       TPR_2   8 GlayyklgdyeeAleafekAleld 31 
                 G+++++++ y  Al+ f +   + 
  EPX71062.1 483 GESLLRQQSYGLALKRFHQLYNIF 506
                 78999**********999987765 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0       1.7   1.9e+03       3      37 ..      10      44 ..       8      49 .. 0.72
   2 !   14.4   0.1   4.5e-05      0.05       4      42 ..      79     117 ..      76     120 .. 0.91
   3 !    8.9   0.3    0.0027         3       6      40 ..     222     257 ..     216     260 .. 0.81
   4 !    9.1   0.0    0.0023       2.6       1      43 [.     398     440 ..     398     441 .. 0.88

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 1.7
      TPR_14  3 allalaeallalGdpdeAiallrralalaPddaea 37
                al ++a   ++ G + ++++    +l++ P++aea
  EPX71062.1 10 ALFDRAVNQFEDGHFSRSLKTTLSILKKKPKHAEA 44
                55566666677788888888888888888888877 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 4.5e-05
      TPR_14   4 llalaeallalGdpdeAiallrralalaPddaeawllla 42 
                 ++ala  ++ + d+  ++++++ a++  P+++ +++  a
  EPX71062.1  79 WQALAITYRDRKDYHSSLNAYKNAIRISPKNEGLLYDAA 117
                 9******************************99887666 PP

  == domain 3  score: 8.9 bits;  conditional E-value: 0.0027
      TPR_14   6 alaeallalGdpdeAiallrralalaPd.daeawll 40 
                 +la ++++ +++deA+ l+ +++a++ d ++ +w++
  EPX71062.1 222 QLANLYFRFQKYDEALHLYGKLIAKYKDrNDFLWRY 257
                 89***********************99723455555 PP

  == domain 4  score: 9.1 bits;  conditional E-value: 0.0023
      TPR_14   1 peallalaeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 p+++l+ +++l +lG++ eAi+ l  +++l+ +d+++  +la+
  EPX71062.1 398 PDLYLLKGKILSRLGEWSEAIRTLTFCCDLDRGDRALASRLAK 440
                 6789999*****************9999999888888888876 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0       2.2   2.4e+03      10      23 ..      53      66 ..      47      72 .. 0.80
   2 !    7.1   0.0    0.0054         6       1      32 [.      78     107 ..      78     111 .. 0.85
   3 !   14.0   0.6   3.4e-05     0.038       3      32 ..     221     250 ..     220     252 .. 0.84
   4 !    9.0   0.0    0.0013       1.5       2      22 ..     401     421 ..     400     422 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 2.2
       TPR_7 10 srlGdyeeAielye 23
                ++l++y +A+  ++
  EPX71062.1 53 CKLNNYHDALLRCQ 66
                899*****986665 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0054
       TPR_7   1 aLlnLarlysrlGdyeeAielyeqsLaltkdp 32 
                 ++ +La +y+++ dy   +  y+   a++ +p
  EPX71062.1  78 CWQALAITYRDRKDYHSSLNAYKN--AIRISP 107
                 6789*******************9..776555 PP

  == domain 3  score: 14.0 bits;  conditional E-value: 3.4e-05
       TPR_7   3 lnLarlysrlGdyeeAielyeqsLaltkdp 32 
                  +La+ly+r ++y+eA+ ly +++a  kd 
  EPX71062.1 221 EQLANLYFRFQKYDEALHLYGKLIAKYKDR 250
                 58*******************977766665 PP

  == domain 4  score: 9.0 bits;  conditional E-value: 0.0013
       TPR_7   2 LlnLarlysrlGdyeeAiely 22 
                 +l  + + srlG+++eAi+ +
  EPX71062.1 401 YLLKGKILSRLGEWSEAIRTL 421
                 677799************976 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.7   3.6e-07    0.0004       4      39 ..      86     121 ..      85     123 .. 0.92
   2 ?    3.9   0.0     0.037        42      14      42 .]     130     158 ..     130     158 .. 0.92
   3 ?    4.5   0.4     0.026        29       2      22 ..     225     245 ..     224     252 .. 0.90
   4 ?    2.5   0.0       0.1   1.1e+02      20      42 .]     390     412 ..     381     421 .. 0.77

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 3.6e-07
      TPR_11   4 yyeqGkyeeAieaYkkAlkldPdnaeayynLGlayy 39 
                 y+++ +y  +++aYk+A++++P+n  ++y  +++++
  EPX71062.1  86 YRDRKDYHSSLNAYKNAIRISPKNEGLLYDAAYLQF 121
                 99*************************999887765 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.037
      TPR_11  14 ieaYkkAlkldPdnaeayynLGlayykqG 42 
                 ++++++ ++ld++n e  ++L l yy  G
  EPX71062.1 130 VQSWQTLVNLDSENLEYRLCLTLSYYLSG 158
                 5899*********************9766 PP

  == domain 3  score: 4.5 bits;  conditional E-value: 0.026
      TPR_11   2 dayyeqGkyeeAieaYkkAlk 22 
                 ++y+  +ky+eA+  Y k ++
  EPX71062.1 225 NLYFRFQKYDEALHLYGKLIA 245
                 899999**********99876 PP

  == domain 4  score: 2.5 bits;  conditional E-value: 0.1
      TPR_11  20 AlkldPdnaeayynLGlayykqG 42 
                 A+   P+ +++y+  G+++ ++G
  EPX71062.1 390 AISNLPTLPDLYLLKGKILSRLG 412
                 55556778888888888877776 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.75   8.4e+02       4      43 ..      15      53 ..      12      74 .. 0.71
   2 !    8.3   0.3    0.0031       3.5       2      50 ..      81     126 ..      81     128 .. 0.85
   3 !   14.3   0.3   4.2e-05     0.047       3      40 ..     223     257 ..     222     264 .. 0.90
   4 ?    5.6   0.0     0.022        25      21      54 ..     388     418 ..     379     422 .. 0.77
   5 ?    0.6   0.0       0.8     9e+02       4      23 ..     483     502 ..     482     506 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.75
      TPR_16  4 araalragdyddAaaaleaalkrdpssPdaaeAllllgda 43
                a   ++ g++ + ++     lk+ p++   a Al +l+++
  EPX71062.1 15 AVNQFEDGHFSRSLKTTLSILKKKPKHA-EAIALEGLNLC 53
                5667888999999999999999994444.34444444444 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.0031
      TPR_16   2 alaraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrl 50 
                 ala  +++++dy   ++a++ a++     P +   l+  + + +++  +
  EPX71062.1  81 ALAITYRDRKDYHSSLNAYKNAIRIS---PKNEGLLYDAAYLQFHLRLY 126
                 68999*******************99...77777888888888877665 PP

  == domain 3  score: 14.3 bits;  conditional E-value: 4.2e-05
      TPR_16   3 laraalragdyddAaaaleaalkrdpssPdaaeAllll 40 
                 la++++r ++yd+A++++  +++++    d+ ++l+ +
  EPX71062.1 223 LANLYFRFQKYDEALHLYGKLIAKY---KDRNDFLWRY 257
                 89***********************...9999999876 PP

  == domain 4  score: 5.6 bits;  conditional E-value: 0.022
      TPR_16  21 eaalkrdpssPdaaeAllllgdaalrqgrlaeAa 54 
                 ++a+ +    P  ++ +ll+g ++ r+g++ eA+
  EPX71062.1 388 DQAISNL---PTLPDLYLLKGKILSRLGEWSEAI 418
                 5666666...56677******************9 PP

  == domain 5  score: 0.6 bits;  conditional E-value: 0.8
      TPR_16   4 araalragdyddAaaaleaa 23 
                 + ++lr++ y  A+++++++
  EPX71062.1 483 GESLLRQQSYGLALKRFHQL 502
                 56899999999999999987 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0      0.34   3.8e+02      17      44 ..      34      61 ..       3      77 .. 0.71
   2 !   11.5   0.2   0.00029      0.33       3      38 ..      88     123 ..      86     126 .. 0.92
   3 !    7.3   0.0    0.0062         7      24      57 ..     215     249 ..     204     261 .. 0.80
   4 !    6.9   0.0    0.0079       8.8       6      48 ..     379     421 ..     378     443 .. 0.88
   5 ?   -0.4   0.0       1.5   1.7e+03       1      18 [.     486     503 ..     486     508 .. 0.88

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.34
      TPR_19 17 alqedpknaearllLAeallalgqldeA 44
                +l+++pk+aea +l    l +l+++ +A
  EPX71062.1 34 ILKKKPKHAEAIALEGLNLCKLNNYHDA 61
                4555777777777777777777777776 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 0.00029
      TPR_19   3 aegdyaeAlalleqalqedpknaearllLAeallal 38 
                 +++dy + l+++++a+  +pkn+ ++++ A +++ l
  EPX71062.1  88 DRKDYHSSLNAYKNAIRISPKNEGLLYDAAYLQFHL 123
                 6889999************************99976 PP

  == domain 3  score: 7.3 bits;  conditional E-value: 0.0062
      TPR_19  24 naearl.lLAeallalgqldeAealLdalpeedpd 57 
                 n+++r+ +LA++++    +deA  l  +l ++++d
  EPX71062.1 215 NDWLRYeQLANLYFRFQKYDEALHLYGKLIAKYKD 249
                 78899999**************9999999988888 PP

  == domain 4  score: 6.9 bits;  conditional E-value: 0.0079
      TPR_19   6 dyaeAlalleqalqedpknaearllLAeallalgqldeAealL 48 
                 dya+ l    qa++  p  +++ ll  ++l  lg++ eA+++L
  EPX71062.1 379 DYASSLHWIDQAISNLPTLPDLYLLKGKILSRLGEWSEAIRTL 421
                 5666666778889999999**********************99 PP

  == domain 5  score: -0.4 bits;  conditional E-value: 1.5
      TPR_19   1 llaegdyaeAlalleqal 18 
                 ll ++ y  Al+++ q++
  EPX71062.1 486 LLRQQSYGLALKRFHQLY 503
                 799***********9986 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.7   0.00062       0.7      24      75 ..      56     106 ..      42     108 .. 0.86
   2 !    9.6   0.4   0.00096       1.1       8      30 ..     222     244 ..     217     250 .. 0.60
   3 ?    2.5   0.0      0.16   1.8e+02       6      26 ..     401     421 ..     388     442 .. 0.74
   4 ?    3.8   0.0     0.064        72      10      36 ..     483     509 ..     483     513 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00062
      TPR_12  24 ellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealaia 75 
                  +++ al +++ + G + +    + ++L+++yr +++y   l++++ a++i 
  EPX71062.1  56 NNYHDALLRCQLAIGLN-AKSRFCWQALAITYRDRKDYHSSLNAYKNAIRIS 106
                 56888888888888765.5899999*********************999986 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00096
      TPR_12   8 nlaavlrrlgrydeAlellekal 30 
                 +la++++r ++ydeAl l+ k +
  EPX71062.1 222 QLANLYFRFQKYDEALHLYGKLI 244
                 46666666666666666665544 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.16
      TPR_12   6 lnnlaavlrrlgrydeAlell 26 
                 +   + +l rlg++ eA++ l
  EPX71062.1 401 YLLKGKILSRLGEWSEAIRTL 421
                 444566666666666666655 PP

  == domain 4  score: 3.8 bits;  conditional E-value: 0.064
      TPR_12  10 aavlrrlgrydeAlellekaleiarrl 36 
                 ++ l+r++ y  Al+ +++ ++i++++
  EPX71062.1 483 GESLLRQQSYGLALKRFHQLYNIFKEW 509
                 67899******************9876 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.4         1   1.2e+03       9      28 ..      50      69 ..      42      74 .. 0.73
   2 !   16.0   0.1   6.9e-06    0.0077       4      34 .]      79     109 ..      77     109 .. 0.94
   3 ?   -0.8   0.1       1.4   1.6e+03      10      24 ..     153     167 ..     152     169 .. 0.87
   4 !    9.0   2.8    0.0012       1.3       6      26 ..     222     242 ..     219     248 .. 0.90
   5 !    6.7   0.0    0.0061       6.8       2      27 ..     399     424 ..     398     431 .. 0.81
   6 ?   -2.3   0.1       4.1   4.6e+03       6      24 ..     437     455 ..     436     457 .. 0.79

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 1
                HHHHHTT-HHHHHHHHHHHH CS
       TPR_1  9 nayfklgkydeAleyyekAL 28
                + + kl++y +Al  ++ A+
  EPX71062.1 50 LNLCKLNNYHDALLRCQLAI 69
                55679*******96666665 PP

  == domain 2  score: 16.0 bits;  conditional E-value: 6.9e-06
                 HHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   4 lynlGnayfklgkydeAleyyekALelnPnn 34 
                 +  l+ +y+  ++y   l +y+ A+++ P+n
  EPX71062.1  79 WQALAITYRDRKDYHSSLNAYKNAIRISPKN 109
                 7789*************************98 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 1.4
                 HHHHTT-HHHHHHHH CS
       TPR_1  10 ayfklgkydeAleyy 24 
                  y+  g y+ +l y+
  EPX71062.1 153 SYYLSGSYERCLSYC 167
                 6999999**999998 PP

  == domain 4  score: 9.0 bits;  conditional E-value: 0.0012
                 HHHHHHHHTT-HHHHHHHHHH CS
       TPR_1   6 nlGnayfklgkydeAleyyek 26 
                 +l+n+yf+ +kydeAl  y k
  EPX71062.1 222 QLANLYFRFQKYDEALHLYGK 242
                 79***************9976 PP

  == domain 5  score: 6.7 bits;  conditional E-value: 0.0061
                 HHHHHHHHHHHHTT-HHHHHHHHHHH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekA 27 
                 + +  +G ++ +lg++ eA+     +
  EPX71062.1 399 DLYLLKGKILSRLGEWSEAIRTLTFC 424
                 78999***************866655 PP

  == domain 6  score: -2.3 bits;  conditional E-value: 4.1
                 HHHHHHHHTT-HHHHHHHH CS
       TPR_1   6 nlGnayfklgkydeAleyy 24 
                 +l+ +yf+  + + A +  
  EPX71062.1 437 RLAKTYFYIDENQLAYQSL 455
                 7999999999888887766 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       7.2   8.1e+03      12      21 ..      52      61 ..      40      66 .. 0.61
   2 !    9.6   0.1   0.00076      0.85       8      31 ..      82     105 ..      80     106 .. 0.94
   3 !   13.5   0.4   4.6e-05     0.051       6      33 ..     221     248 ..     219     250 .. 0.92
   4 ?   -1.7   0.0       2.6   2.9e+03      10      22 ..     406     418 ..     405     419 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 7.2
      TPR_10 12 lrqrgrydeA 21
                l+++++y++A
  EPX71062.1 52 LCKLNNYHDA 61
                4555555555 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00076
      TPR_10   8 LanalrqrgrydeAealleealai 31 
                 La+++r+r++y+ +++ ++ a++i
  EPX71062.1  82 LAITYRDRKDYHSSLNAYKNAIRI 105
                 9********************997 PP

  == domain 3  score: 13.5 bits;  conditional E-value: 4.6e-05
      TPR_10   6 nNLanalrqrgrydeAealleealairr 33 
                   Lan++++ ++ydeA+ l+ + +a ++
  EPX71062.1 221 EQLANLYFRFQKYDEALHLYGKLIAKYK 248
                 57********************999997 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 2.6
      TPR_10  10 nalrqrgrydeAe 22 
                  +l+++g++ eA 
  EPX71062.1 406 KILSRLGEWSEAI 418
                 5899*******96 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.1   1.6e-05     0.018       4      34 .]      79     109 ..      78     109 .. 0.96
   2 ?    5.5   0.8     0.021        24       4      28 ..     220     244 ..     219     245 .. 0.88
   3 ?    4.7   0.0     0.038        43       2      32 ..     399     429 ..     398     431 .. 0.87

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.6e-05
                 HHHHHHHHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8   4 yynlgsiylklgdyeeAkeyyekaleldpdn 34 
                 ++ l+ +y++ +dy+++  +y+ a++++p+n
  EPX71062.1  79 WQALAITYRDRKDYHSSLNAYKNAIRISPKN 109
                 899**************************97 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.021
                 HHHHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_8   4 yynlgsiylklgdyeeAkeyyekal 28 
                 y +l+++y+  ++y+eA   y k +
  EPX71062.1 220 YEQLANLYFRFQKYDEALHLYGKLI 244
                 779**************99887765 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.038
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldp 32 
                 ++y+++g+i++ lg+  eA+ ++  +++ld+
  EPX71062.1 399 DLYLLKGKILSRLGEWSEAIRTLTFCCDLDR 429
                 68*************9999999888888776 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0       0.1   1.2e+02       9      49 ..      22      62 ..      12      67 .. 0.92
   2 ?    2.9   0.0      0.11   1.2e+02       3      43 ..      84     124 ..      82     128 .. 0.91
   3 !   12.8   0.0   8.7e-05     0.098      10      68 ..     379     438 ..     377     441 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.1
       TPR_9  9 edweralavverllllaPddpeerrdRGlllaqlGclsaAl 49
                 +++r l++  ++l  +P+++e +   Gl l +l++++ Al
  EPX71062.1 22 GHFSRSLKTTLSILKKKPKHAEAIALEGLNLCKLNNYHDAL 62
                578999999999*************************9996 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.11
       TPR_9   3 aiaireedweralavverllllaPddpeerrdRGlllaqlG 43 
                  ++  ++d+   l ++   + + P+  ++++d + l+++l 
  EPX71062.1  84 ITYRDRKDYHSSLNAYKNAIRISPKNEGLLYDAAYLQFHLR 124
                 578999*******************************9985 PP

  == domain 3  score: 12.8 bits;  conditional E-value: 8.7e-05
       TPR_9  10 dweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalap.dapdaeai 68 
                 d++  l  ++  +   P  p++++  G +l +lG +s+A++ L  + +l+  d++ a ++
  EPX71062.1 379 DYASSLHWIDQAISNLPTLPDLYLLKGKILSRLGEWSEAIRTLTFCCDLDRgDRALASRL 438
                 6667777888889999********************************998666666655 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   3.1    0.0026       2.9      16      81 ..      35     101 ..       9     102 .. 0.87
   2 !    6.9   2.9    0.0065       7.3       3      72 ..      56     126 ..      54     128 .. 0.88
   3 !    8.1   0.8    0.0027         3      17      47 ..     138     168 ..     124     176 .. 0.86
   4 ?    4.8   0.4     0.029        33      29      49 ..     223     243 ..     214     259 .. 0.74
   5 !   12.1   0.1   0.00015      0.17      27      80 ..     368     422 ..     314     424 .. 0.78
   6 ?   -2.2   0.1       4.5     5e+03      36      61 ..     496     517 ..     486     520 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0026
                 H.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH-S CS
      ANAPC3  16 laaetespedayllAlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaLek 81 
                 l+++++++e++ l +l l+++++y+ A+  ++ a +ln ks  c+  +A ++ + k y+  ++a+++
  EPX71062.1  35 LKKKPKHAEAIALEGLNLCKLNNYHDALLRCQLAiGLNAKSRFCWQALAITYRDRKDYHSSLNAYKN 101
                 368999****************************************999999999999988888765 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0065
                 T-HHHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-H CS
      ANAPC3   3 nnyknAiflaerllaaetespedayllAlclylngqykrAyellrka.klnskslgcrylfAqcllkLkky 72 
                 nny++A++ + ++   +++s     +lA ++  +++y++ ++ +++a ++ +k++g +y +A  ++ L  y
  EPX71062.1  56 NNYHDALLRCQLAIGLNAKSRFCWQALAITYRDRKDYHSSLNAYKNAiRISPKNEGLLYDAAYLQFHLRLY 126
                 899***********7777777777779********************************999888887655 PP

  == domain 3  score: 8.1 bits;  conditional E-value: 0.0027
                 .HHH--HHHHHHHHHHHHHTT-HHHHHHHHH CS
      ANAPC3  17 aaetespedayllAlclylngqykrAyellr 47 
                 + ++e++e ++ l l++yl+g y+r++ ++ 
  EPX71062.1 138 NLDSENLEYRLCLTLSYYLSGSYERCLSYCT 168
                 5789999*******************99876 PP

  == domain 4  score: 4.8 bits;  conditional E-value: 0.029
                 HHHHHHHTT-HHHHHHHHHCT CS
      ANAPC3  29 lAlclylngqykrAyellrka 49 
                 lA  +++ ++y++A++l+ k+
  EPX71062.1 223 LANLYFRFQKYDEALHLYGKL 243
                 577777777777777776665 PP

  == domain 5  score: 12.1 bits;  conditional E-value: 0.00015
                 HHH.HHHHHHTT-HHHHHHHHHCTSHHHC-HHHHHHHH.HHHHHTT-HHHHHHHH- CS
      ANAPC3  27 yll.AlclylngqykrAyellrkaklnskslgcrylfA.qcllkLkkyeeAiaaLe 80 
                 y+l +l+++ + +y + ++++++a +n  +l  +yl+  + l  L+++ eAi++L 
  EPX71062.1 368 YYLsCLTYF-TFDYASSLHWIDQAISNLPTLPDLYLLKgKILSRLGEWSEAIRTLT 422
                 334255554.689***********8888888777777659999**********995 PP

  == domain 6  score: -2.2 bits;  conditional E-value: 4.5
                 TT-HHHHHHHHHCTSHHHC-HHHHHH CS
      ANAPC3  36 ngqykrAyellrkaklnskslgcryl 61 
                 ++++++ y++++++    +s+  +y 
  EPX71062.1 496 LKRFHQLYNIFKEW----TSISFHYH 517
                 67899999999999....88888775 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1         1   1.2e+03       6      32 ..      35      61 ..      32      62 .. 0.89
   2 ?    0.1   0.0       1.2   1.3e+03      16      29 ..      79      92 ..      77      95 .. 0.89
   3 ?    3.5   0.1     0.098   1.1e+02       1      22 [.      98     119 ..      98     124 .. 0.83
   4 ?    0.7   0.1      0.77   8.6e+02      16      33 ..     220     237 ..     216     238 .. 0.90
   5 !   10.9   0.0   0.00044      0.49       4      33 ..     389     418 ..     387     419 .. 0.93

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 1
      TPR_17  6 leldPnnadaynnLAelllknGdlmtA 32
                l++ P++a+a  + +  l+k++++ +A
  EPX71062.1 35 LKKKPKHAEAIALEGLNLCKLNNYHDA 61
                7889*****999999999999999988 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 1.2
      TPR_17 16 ynnLAelllknGdl 29
                ++ LA +++ ++d+
  EPX71062.1 79 WQALAITYRDRKDY 92
                999******99998 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.098
      TPR_17   1 lylkaleldPnnadaynnLAel 22 
                 +y++a+++ P+n  +++  A+l
  EPX71062.1  98 AYKNAIRISPKNEGLLYDAAYL 119
                 59**********8888877776 PP

  == domain 4  score: 0.7 bits;  conditional E-value: 0.77
      TPR_17  16 ynnLAelllknGdlmtAr 33 
                 y +LA+l+ +  ++++A+
  EPX71062.1 220 YEQLANLYFRFQKYDEAL 237
                 668************996 PP

  == domain 5  score: 10.9 bits;  conditional E-value: 0.00044
      TPR_17   4 kaleldPnnadaynnLAelllknGdlmtAr 33 
                 +a+ + P+ +d+y +++++l+++G++ +A+
  EPX71062.1 389 QAISNLPTLPDLYLLKGKILSRLGEWSEAI 418
                 79999********************99996 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       3.5   3.9e+03       2      22 ..      10      30 ..       9      41 .. 0.72
   2 ?    1.9   0.0       0.4   4.5e+02       6      32 ..      82     108 ..      81     109 .. 0.90
   3 !   12.0   0.9   0.00024      0.27       5      31 ..     222     248 ..     220     249 .. 0.92
   4 ?    2.3   0.0      0.29   3.3e+02       3      23 ..     401     421 ..     399     424 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 3.5
                HHHHHHHHHHHHHHHHHHHHH CS
       TPR_6  2 AlyklalsyrklgdtdkAlea 22
                Al+ +a  +++ g  +++l++
  EPX71062.1 10 ALFDRAVNQFEDGHFSRSLKT 30
                899999999996698888885 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.4
                 HHHHHHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6   6 lalsyrklgdtdkAlealerlikeYPd 32 
                 la  yr  +d+  +l a+++ i+  P+
  EPX71062.1  82 LAITYRDRKDYHSSLNAYKNAIRISPK 108
                 688999988*************99987 PP

  == domain 3  score: 12.0 bits;  conditional E-value: 0.00024
                 HHHHHHHH.HHHHHHHHHHHHHHHHH-T CS
       TPR_6   5 klalsyrk.lgdtdkAlealerlikeYP 31 
                 +la +y++ + ++d+Al ++ +li +Y 
  EPX71062.1 222 QLANLYFRfQ-KYDEALHLYGKLIAKYK 248
                 699*****88.***************95 PP

  == domain 4  score: 2.3 bits;  conditional E-value: 0.29
                 HHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   3 lyklalsyrklgdtdkAleal 23 
                 +++ ++ + +lg++++A+++l
  EPX71062.1 401 YLLKGKILSRLGEWSEAIRTL 421
                 677789999999*******98 PP

>> TPR_15  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   0.0   0.00053      0.59     143     182 ..      73     112 ..      20     166 .. 0.88
   2 ?    5.0   0.2     0.011        12     219     251 ..     222     256 ..     208     258 .. 0.84
   3 ?   -0.5   0.0      0.52   5.9e+02      12      38 ..     368     394 ..     356     410 .. 0.84
   4 ?   -1.6   0.0       1.1   1.2e+03     149     195 ..     401     449 ..     387     461 .. 0.79
   5 ?   -3.2   0.0       3.4   3.9e+03     184     196 ..     473     485 ..     471     490 .. 0.76

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00053
      TPR_15 143 eqsaafllaraelyrqegqtdaAlrdyreAlalapdssel 182
                 ++s + ++a+a  yr++ +   +l++y++A++ +p+++ l
  EPX71062.1  73 AKSRFCWQALAITYRDRKDYHSSLNAYKNAIRISPKNEGL 112
                 489999*****************************98866 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.011
      TPR_15 219 plaaAlllLgrpkkALeylrkqak..enrkdplwl 251
                  la  + + +++++AL+++ k  +  + r+d+lw+
  EPX71062.1 222 QLANLYFRFQKYDEALHLYGKLIAkyKDRNDFLWR 256
                 689999**************9655124789****8 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.52
      TPR_15  12 lklatllykqgdvkkAlevLkeaaqka 38 
                 + l+ l+y ++d++ +l ++++a+ + 
  EPX71062.1 368 YYLSCLTYFTFDYASSLHWIDQAISNL 394
                 557889**************9987765 PP

  == domain 4  score: -1.6 bits;  conditional E-value: 1.1
      TPR_15 149 llaraelyrqegqtdaAlrdyreAlalapdsselraal..lWlliDlgr 195
                 +l+ +++ ++ g++ +A+r +    +l+ ++ +l ++l   +++iD ++
  EPX71062.1 401 YLLKGKILSRLGEWSEAIRTLTFCCDLDRGDRALASRLakTYFYIDENQ 449
                 5677788899999999999999999999999999888733477787765 PP

  == domain 5  score: -3.2 bits;  conditional E-value: 3.4
      TPR_15 184 aallWlliDlgrr 196
                  + +W+li+ g+ 
  EPX71062.1 473 TECIWFLIEDGES 485
                 578*****99864 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (679 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       692  (0.0385967); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.66u 0.28s 00:00:00.94 Elapsed: 00:00:00.45
# Mc/sec: 4517.95
//
Query:       EPX71063.1  [L=338]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.4e-09   35.3   4.0     0.0078   16.3   0.1    4.5  4  TPR_2          Tetratricopeptide repeat
    2.8e-07   30.9   9.4      0.021   15.3   0.9    4.4  4  TPR_19         Tetratricopeptide repeat
    4.6e-07   29.5   9.4     0.0095   16.1   0.2    4.9  4  TPR_8          Tetratricopeptide repeat
    4.4e-06   26.9   9.7      0.057   13.7   0.1    4.4  6  TPR_12         Tetratricopeptide repeat
    1.1e-05   25.0   3.3       0.21   11.5   0.1    4.2  4  TPR_1          Tetratricopeptide repeat
    1.8e-05   25.2   2.5       0.34   11.8   0.1    3.7  3  TPR_14         Tetratricopeptide repeat
    5.5e-05   23.7   0.2       0.44   11.2   0.0    3.4  3  TPR_16         Tetratricopeptide repeat
     0.0003   20.9   1.3       0.86   10.1   0.1    4.0  3  TPR_17         Tetratricopeptide repeat
     0.0027   17.5   1.1        1.7    8.6   0.1    4.1  3  TPR_10         Tetratricopeptide repeat
     0.0032   16.9   7.6      0.098   12.0   7.6    2.4  1  TPR_MalT       MalT-like TPR region
     0.0033   17.2  11.1       0.25   11.0   0.1    3.3  4  TPR_21         Tetratricopeptide repeat-like domain
     0.0045   16.9   2.6        4.7    7.5   0.1    4.0  4  TPR_7          Tetratricopeptide repeat
      0.008   16.7   6.2        2.5    8.9   0.1    4.2  5  TPR_6          Tetratricopeptide repeat
     0.0092   16.1   0.8       0.15   12.3   0.1    3.1  4  TPR_9          Tetratricopeptide repeat
  ------ inclusion threshold ------
       0.12   12.2   0.0       0.23   11.3   0.0    1.4  1  DUF5594        Domain of unknown function (DUF5594)
       0.18   11.4   6.1       0.15   11.7   3.5    2.1  2  PI3K_P85_iSH2  Phosphatidylinositol 3-kinase regulatory subun
       0.25   11.7  10.2        8.6    6.8   0.7    4.0  4  TPR_20         Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.1   7.4e-06    0.0078       2      31 ..      40      69 ..      39      72 .. 0.91
   2 ?   -2.7   0.0       8.9   9.3e+03      20      31 ..     147     158 ..     139     161 .. 0.61
   3 !   15.5   0.1   1.3e-05     0.013       1      29 [.     162     190 ..     162     192 .. 0.96
   4 ?    1.3   0.1      0.47     5e+02       2      12 ..     241     251 ..     240     262 .. 0.86

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 7.4e-06
       TPR_2  2 ealynlGlayyklgdyeeAleafekAleld 31
                +a+ +lG+a ++lg+ ++A++af+++++  
  EPX71063.1 40 RAHEMLGEAFAELGEIKKAKNAFRESIRRS 69
                6899*********************99875 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 8.9
       TPR_2  20 AleafekAleld 31 
                 ++++ + Al+ d
  EPX71063.1 147 CEKYTNLALQVD 158
                 456666666655 PP

  == domain 3  score: 15.5 bits;  conditional E-value: 1.3e-05
       TPR_2   1 aealynlGlayyklgdyeeAleafekAle 29 
                 aeal  l+   + +++++eA+ea++++l+
  EPX71063.1 162 AEALQTLASMRISQQNFDEAKEALQECLK 190
                 799************************97 PP

  == domain 4  score: 1.3 bits;  conditional E-value: 0.47
       TPR_2   2 ealynlGlayy 12 
                 +++y lG+ +y
  EPX71063.1 241 DVWYLLGWNCY 251
                 68999999988 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.1     0.001       1.1       2      49 ..      15      63 ..      14      74 .. 0.86
   2 ?    2.9   0.0      0.15   1.6e+02       7      31 ..      98     122 ..      97     131 .. 0.82
   3 !   15.3   0.9     2e-05     0.021      17      51 ..     154     188 ..     141     197 .. 0.84
   4 ?    5.6   0.1     0.022        23       5      43 ..     220     259 ..     216     259 .. 0.90

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.001
      TPR_19  2 laegdyaeAlalleqa.lqedpknaearllLAeallalgqldeAealLd 49
                l+e+++ eA+ l + a  +++ ++++a   L ea  +lg++++A+++  
  EPX71063.1 15 LKENNPSEAIVLAQVAiGKASDNDGRAHEMLGEAFAELGEIKKAKNAFR 63
                688999999999999845778889*********************9876 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.15
      TPR_19   7 yaeAlalleqalqedpknaearllL 31 
                 y++ l++l++++q + ++ +++  L
  EPX71063.1  98 YDRGLNILSRLYQLNSNDVDVKKKL 122
                 677899*************998776 PP

  == domain 3  score: 15.3 bits;  conditional E-value: 2e-05
      TPR_19  17 alqedpknaearllLAeallalgqldeAealLdal 51 
                 alq d  naea+  LA   +++ ++deA+++L++ 
  EPX71063.1 154 ALQVDHTNAEALQTLASMRISQQNFDEAKEALQEC 188
                 8999****************************975 PP

  == domain 4  score: 5.6 bits;  conditional E-value: 0.022
      TPR_19   5 gdyaeAlalleqalqedpknaearllL.Aeallalgqlde 43 
                 + ++eA++ll ++ +ed +  ++++lL  ++++++ +l+e
  EPX71063.1 220 EMHQEAHDLLIYLQKEDDEIVDVWYLLgWNCYVEAQNLQE 259
                 6799********9999***********99******99986 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.0   4.5e-05     0.048       2      31 ..      40      69 ..      39      71 .. 0.90
   2 ?   -0.5   0.1       1.9     2e+03      17      31 ..     140     154 ..     125     156 .. 0.83
   3 !   16.1   0.2     9e-06    0.0095       1      29 [.     162     190 ..     162     194 .. 0.94
   4 ?    1.4   0.0      0.45   4.8e+02       2      19 ..     241     259 ..     240     263 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 4.5e-05
                CHHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
       TPR_8  2 eayynlgsiylklgdyeeAkeyyekaleld 31
                +a+ +lg +  +lg++++Ak ++++ ++ +
  EPX71063.1 40 RAHEMLGEAFAELGEIKKAKNAFRESIRRS 69
                67889********************99865 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 1.9
                 HHHHHHHHHHHHHHH CS
       TPR_8  17 yeeAkeyyekaleld 31 
                  eeA++ +ek++ l+
  EPX71063.1 140 REEAESQCEKYTNLA 154
                 599999999998876 PP

  == domain 3  score: 16.1 bits;  conditional E-value: 9e-06
                 CCHHHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_8   1 aeayynlgsiylklgdyeeAkeyyekale 29 
                 aea++ l+s  +++++++eAke+++++l+
  EPX71063.1 162 AEALQTLASMRISQQNFDEAKEALQECLK 190
                 7999************************8 PP

  == domain 4  score: 1.4 bits;  conditional E-value: 0.45
                 CHHHHHH.HHHHHTT-HHH CS
       TPR_8   2 eayynlg.siylklgdyee 19 
                 +++y+lg ++y + ++++e
  EPX71063.1 241 DVWYLLGwNCYVEAQNLQE 259
                 79*****999988777765 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.1   5.4e-05     0.057      29      74 ..      23      68 ..      21      71 .. 0.90
   2 ?    0.2   0.0      0.88   9.3e+02      17      36 ..      89     108 ..      83     115 .. 0.70
   3 !   13.6   0.9   5.7e-05      0.06      20      73 ..     141     190 ..     125     194 .. 0.84
   4 !   13.6   0.7   5.7e-05     0.061       5      67 ..     164     228 ..     160     230 .. 0.74
   5 ?    0.4   0.0      0.78   8.2e+02      24      62 ..     220     258 ..     219     259 .. 0.74
   6 ?   -1.8   0.0       3.9   4.1e+03      26      36 ..     279     289 ..     272     311 .. 0.53

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 5.4e-05
      TPR_12 29 aleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealai 74
                a+ +a+ + G+ +++  ++   Lg+++ +lg+ ++A ++++e++++
  EPX71063.1 23 AIVLAQVAIGKASDNDGRAHEMLGEAFAELGEIKKAKNAFRESIRR 68
                666788889999*******************************987 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.88
      TPR_12  17 grydeAlellekaleiarrl 36 
                 ++ +++l l+++ l+i +rl
  EPX71063.1  89 EDSEKSLMLYDRGLNILSRL 108
                 55677777777777777766 PP

  == domain 3  score: 13.6 bits;  conditional E-value: 5.7e-05
      TPR_12  20 deAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleeala 73 
                 +eA++ +ek  ++a ++   dh   a++l++L+ +   + +++eA e+l+e+l+
  EPX71063.1 141 EEAESQCEKYTNLALQV---DH-TNAEALQTLASMRISQQNFDEAKEALQECLK 190
                 78888888888888777...56.369**********9999***********996 PP

  == domain 4  score: 13.6 bits;  conditional E-value: 5.7e-05
      TPR_12   5 alnnlaavlrrlgrydeAlellekaleiarrllGpdhpltatt..lrnLgrlyralgryeeAlel 67 
                 al  la++   ++++deA e l+++l  ++++  +d+ ++ t+  +   +rl+ + + ++eA++l
  EPX71063.1 164 ALQTLASMRISQQNFDEAKEALQECLKSISKAAMEDSIDLPTYavRTSVARLLIEVEMHQEAHDL 228
                 55369999999999999999999999999999999996655540045555556677888888776 PP

  == domain 5  score: 0.4 bits;  conditional E-value: 0.78
      TPR_12  24 ellekaleiarrllGpdhpltattlrnLgrlyr.algrye 62 
                 e++++a+++   l+ +d  + + + + Lg+ ++ ++ +++
  EPX71063.1 220 EMHQEAHDLLIYLQKEDD-EIVDVWYLLGWNCYvEAQNLQ 258
                 789999999988876655.889999999998643666655 PP

  == domain 6  score: -1.8 bits;  conditional E-value: 3.9
      TPR_12  26 lekaleiarrl 36 
                 +  al+ ++++
  EPX71063.1 279 FLGALATYQKT 289
                 44555555444 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.0   0.00032      0.33       3      29 ..      41      67 ..      39      71 .. 0.88
   2 ?   -0.6   0.0       1.3   1.4e+03      19      34 .]     146     161 ..     144     161 .. 0.83
   3 !   11.5   0.1    0.0002      0.21       1      29 [.     162     190 ..     162     191 .. 0.92
   4 ?   -1.6   0.1       2.7   2.9e+03       2       9 ..     241     248 ..     240     254 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00032
                HHHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_1  3 alynlGnayfklgkydeAleyyekALe 29
                a+  lG a+ +lg+ ++A  ++++ ++
  EPX71063.1 41 AHEMLGEAFAELGEIKKAKNAFRESIR 67
                66679*******************997 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 1.3
                 HHHHHHHHHHHHSTTH CS
       TPR_1  19 eAleyyekALelnPnn 34 
                 ++++y + AL+++++n
  EPX71063.1 146 QCEKYTNLALQVDHTN 161
                 5678889999999987 PP

  == domain 3  score: 11.5 bits;  conditional E-value: 0.0002
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_1   1 akalynlGnayfklgkydeAleyyekALe 29 
                 a+al  l+ +  +++++deA e+ +++L+
  EPX71063.1 162 AEALQTLASMRISQQNFDEAKEALQECLK 190
                 788889999999***************97 PP

  == domain 4  score: -1.6 bits;  conditional E-value: 2.7
                 HHHHHHHH CS
       TPR_1   2 kalynlGn 9  
                 +++y lG 
  EPX71063.1 241 DVWYLLGW 248
                 799*9996 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   0.1   0.00033      0.34       3      31 ..      41      69 ..      39      85 .. 0.88
   2 !   11.1   0.1   0.00058      0.61       2      29 ..     163     190 ..     162     199 .. 0.93
   3 ?   -2.0   0.0       9.3   9.8e+03      14      24 ..     219     229 ..     212     248 .. 0.51

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00033
      TPR_14  3 allalaeallalGdpdeAiallrralala 31
                a+ +l+ea+++lG+ ++A +++r+ +++ 
  EPX71063.1 41 AHEMLGEAFAELGEIKKAKNAFRESIRRS 69
                7789********************99975 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.00058
      TPR_14   2 eallalaeallalGdpdeAiallrrala 29 
                 eal+ la+    ++++deA ++l+++l+
  EPX71063.1 163 EALQTLASMRISQQNFDEAKEALQECLK 190
                 899**********************986 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 9.3
      TPR_14  14 lGdpdeAiall 24 
                  + ++eA +ll
  EPX71063.1 219 VEMHQEAHDLL 229
                 44444444433 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0   0.00042      0.44       5      61 ..      12      66 ..       8      72 .. 0.83
   2 ?    3.1   0.0      0.14   1.5e+02       8      25 ..     173     190 ..     167     196 .. 0.85
   3 ?    5.3   0.0      0.03        31       4      51 ..     213     258 ..     211     266 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00042
      TPR_16  5 raalragdyddAaaaleaalkrdpssPd.aaeAllllgdaalrqgrlaeAaalyraal 61
                r+ l+ +++ +A+ +++ a+ ++   +d + +A+  lg+a++++g+ ++A  ++r+ +
  EPX71063.1 12 RDKLKENNPSEAIVLAQVAIGKA---SDnDGRAHEMLGEAFAELGEIKKAKNAFRESI 66
                67788899999999999999999...44499*****************9976666655 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.14
      TPR_16   8 lragdyddAaaaleaalk 25 
                 + ++++d+A +al++ lk
  EPX71063.1 173 ISQQNFDEAKEALQECLK 190
                 5799*********99777 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.03
      TPR_16   4 araalragdyddAaaaleaalkrdpssPdaaeAllllgdaal.rqgrla 51 
                 ar++++    ++A  +l  + k d    + ++ ++llg+ ++ ++++l+
  EPX71063.1 213 ARLLIEVEMHQEAHDLLIYLQKED---DEIVDVWYLLGWNCYvEAQNLQ 258
                 566666666788899998888888...99**********9994446655 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0     0.075        80      11      33 ..      37      59 ..      33      60 .. 0.89
   2 !   10.1   0.1   0.00081      0.86       5      34 .]     154     183 ..     152     183 .. 0.94
   3 ?    2.8   0.0      0.17   1.8e+02      13      30 ..     240     258 ..     232     262 .. 0.78

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.075
      TPR_17 11 nnadaynnLAelllknGdlmtAr 33
                n+  a+ +L+e+++++G+ ++A+
  EPX71063.1 37 NDGRAHEMLGEAFAELGEIKKAK 59
                788999************99996 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00081
      TPR_17   5 aleldPnnadaynnLAelllknGdlmtArq 34 
                 al+ d++na+a++ LA    ++ ++++A++
  EPX71063.1 154 ALQVDHTNAEALQTLASMRISQQNFDEAKE 183
                 7999*********************99986 PP

  == domain 3  score: 2.8 bits;  conditional E-value: 0.17
      TPR_17  13 adaynnLAe.lllknGdlm 30 
                 +d++++L++ ++ ++ +l+
  EPX71063.1 240 VDVWYLLGWnCYVEAQNLQ 258
                 89******97777776665 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.1     0.092        98       8      31 ..      45      68 ..      43      76 .. 0.89
   2 !    8.6   0.1    0.0016       1.7       2      30 ..     162     190 ..     162     200 .. 0.89
   3 ?    1.2   0.0      0.35   3.7e+02       7      35 ..     282     310 ..     274     317 .. 0.69

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.092
      TPR_10  8 LanalrqrgrydeAealleealai 31
                L+ a  ++g+ ++A + ++e++++
  EPX71063.1 45 LGEAFAELGEIKKAKNAFRESIRR 68
                899999***************987 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0016
      TPR_10   2 AsslnNLanalrqrgrydeAealleeala 30 
                 A +l  La +  +++++deA + l+e+l 
  EPX71063.1 162 AEALQTLASMRISQQNFDEAKEALQECLK 190
                 67899999999****************97 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.35
      TPR_10   7 NLanalrqrgrydeAealleealairrrl 35 
                  La +   + + ++ +++++e l+i  +l
  EPX71063.1 282 ALATYQKTMWDDEGILEHMKEILQILNEL 310
                 46667777777777777777777776666 PP

>> TPR_MalT  MalT-like TPR region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   7.6   9.3e-05     0.098      13     229 ..      16     233 ..      14     277 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 9.3e-05
    TPR_MalT  13 asgdaeralelArqALallpeddllariaatavlGeasllqGdleaAlqalqeaekla..rqadslhvallallqqaeilva.qGrLheAletyeqalq 108
                 +++++ +a+ lA+ A+   +++d    + a+ +lGea+   G+ ++A +a++e ++ +  +++d+    +l + q++e   +     +  l++  +  q
  EPX71063.1  16 KENNPSEAIVLAQVAIGKASDND----GRAHEMLGEAFAELGEIKKAKNAFRESIRRSdnLEEDNGYEKYLWMAQIIEDSEKsLMLYDRGLNILSRLYQ 110
                 57899999999999999999999....999************************987522344444333333333333333302245667888888777 PP

    TPR_MalT 109 lateqglqqlplvgfllvlladllyEwndL.eeAeqhlqeGielleqlepeaaldayvllarialaqGdleeAetllekaeelaresnf..hvdwlana 204
                 l       +  l g  + + a+l+     + eeAe  +++   l+ q+  ++ ++a+++la  +++q + +eA+++l++  +   ++ +  ++d ++ a
  EPX71063.1 111 LNSNDVDVKKKLQGA-YCSVAELFMTDLCMrEEAESQCEKYTNLALQV-DHTNAEALQTLASMRISQQNFDEAKEALQECLKSISKAAMedSIDLPTYA 207
                 655555555455555.5666****866655589************999.89999************************998887666652245666655 PP

    TPR_MalT 205 eevrvrlwlaqg.dlaaaerwleaae 229
                  ++ v+ +l +    ++a+++l   +
  EPX71063.1 208 VRTSVARLLIEVeMHQEAHDLLIYLQ 233
                 55554433333313445555555444 PP

>> TPR_21  Tetratricopeptide repeat-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.1   0.00024      0.25     133     179 ..      26      72 ..      12      88 .. 0.82
   2 !   10.5   1.7   0.00034      0.36      70     136 ..     123     192 ..     109     200 .. 0.70
   3 !    6.6   2.9    0.0054       5.7      81     113 ..     167     199 ..     140     235 .. 0.57
   4 ?   -0.5   0.1      0.82   8.7e+02      20      38 ..     243     261 ..     239     266 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00024
      TPR_21 133 lktLeakkeeafaalvaelrGDilvaqgkldeAraaYqaAlaaleek 179
                 l++++  k++  ++++ e+ G+++++ g++++A++a+++++++ ++ 
  EPX71063.1  26 LAQVAIGKASDNDGRAHEMLGEAFAELGEIKKAKNAFRESIRRSDNL 72 
                 56777777888899**************************9998765 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00034
      TPR_21  70 ggtaYaalaaLllAkaaveagdlaaAka..qLewvlekakdeelkalarlRLarvllae..kkydeAlktL 136
                 +g aY ++a+L+ ++  + ++   + ++  +L   +++++ e+l++la++R+ +  ++e  ++++e lk +
  EPX71063.1 123 QG-AYCSVAELFMTDLCMREEAESQCEKytNLALQVDHTNAEALQTLASMRISQQNFDEakEALQECLKSI 192
                 44.599999999999988877777776422799999**************998766654113344444444 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.0054
      TPR_21  81 llAkaaveagdlaaAkaqLewvlekakdeelka 113
                  lA   ++++++++Ak++L++ l++ +++++++
  EPX71063.1 167 TLASMRISQQNFDEAKEALQECLKSISKAAMED 199
                 245555555555555555555555555555544 PP

  == domain 4  score: -0.5 bits;  conditional E-value: 0.82
      TPR_21  20 vglaGwqgwqdyqeeqaee 38 
                   l+Gw+ + + q+ q++ 
  EPX71063.1 243 WYLLGWNCYVEAQNLQEQG 261
                 5689******999988764 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0     0.012        12       4      33 ..      44      71 ..      41      75 .. 0.85
   2 ?   -0.6   0.1       1.7   1.8e+03       3      24 ..     127     149 ..     125     160 .. 0.70
   3 !    7.5   0.1    0.0045       4.7       1      26 [.     164     189 ..     164     199 .. 0.87
   4 ?   -1.0   0.0       2.3   2.4e+03      18      34 ..     282     296 ..     279     298 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.012
       TPR_7  4 nLarlysrlGdyeeAielyeqsLaltkdpe 33
                 L++++ +lG+ ++A   +++   ++++++
  EPX71063.1 44 MLGEAFAELGEIKKAKNAFRE--SIRRSDN 71
                79******************9..7777765 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 1.7
       TPR_7   3 lnLarlysr.lGdyeeAielyeq 24 
                 +  a+l+   l  +eeA++ +e+
  EPX71063.1 127 CSVAELFMTdLCMREEAESQCEK 149
                 55566655558889999999988 PP

  == domain 3  score: 7.5 bits;  conditional E-value: 0.0045
       TPR_7   1 aLlnLarlysrlGdyeeAielyeqsL 26 
                 aL  La+++ ++++++eA e ++++L
  EPX71063.1 164 ALQTLASMRISQQNFDEAKEALQECL 189
                 6778****************999987 PP

  == domain 4  score: -1.0 bits;  conditional E-value: 2.3
       TPR_7  18 AielyeqsLaltkdped 34 
                 A+  y++   +++d+++
  EPX71063.1 282 ALATYQK--TMWDDEGI 296
                 88999**..99999986 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       8.4   8.9e+03      13      27 ..      17      31 ..      14      36 .. 0.74
   2 !    7.9   0.0     0.005       5.3       5      29 ..      44      68 ..      40      71 .. 0.87
   3 !    8.9   0.1    0.0023       2.5       5      28 ..     167     190 ..     163     191 .. 0.82
   4 ?   -0.9   0.0       3.1   3.3e+03       1      15 [.     241     256 ..     241     263 .. 0.68
   5 ?   -2.1   0.1       7.9   8.4e+03       5      13 ..     273     281 ..     271     290 .. 0.55

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 8.4
                HHHHHHHHHHHHHHH CS
       TPR_6 13 lgdtdkAlealerli 27
                 +++++A+ + +  i
  EPX71063.1 17 ENNPSEAIVLAQVAI 31
                458899999988877 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.005
                HHHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6  5 klalsyrklgdtdkAlealerlike 29
                +l++++ +lg+  kA+ a+++ i++
  EPX71063.1 44 MLGEAFAELGEIKKAKNAFRESIRR 68
                79******9**********987765 PP

  == domain 3  score: 8.9 bits;  conditional E-value: 0.0023
                 HHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   5 klalsyrklgdtdkAlealerlik 28 
                  la  ++++++ d+A+eal++++k
  EPX71063.1 167 TLASMRISQQNFDEAKEALQECLK 190
                 5777888988***********997 PP

  == domain 4  score: -0.9 bits;  conditional E-value: 3.1
                 HHHHHHH.HHHHHHHH CS
       TPR_6   1 dAlykla.lsyrklgd 15 
                 d+ y+l+  +y ++++
  EPX71063.1 241 DVWYLLGwNCYVEAQN 256
                 6789999566667434 PP

  == domain 5  score: -2.1 bits;  conditional E-value: 7.9
                 HHHHHHHHH CS
       TPR_6   5 klalsyrkl 13 
                   a+sy+ +
  EPX71063.1 273 ISAKSYFLG 281
                 556666653 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       2.2   2.4e+03      36      53 ..      46      63 ..      43      74 .. 0.83
   2 ?   -0.9   0.0       1.8   1.9e+03      11      29 ..      98     116 ..      96     117 .. 0.87
   3 !   12.3   0.1   0.00014      0.15       6      57 ..     139     190 ..     136     205 .. 0.90
   4 ?   -1.9   0.0       3.6   3.8e+03      45      61 ..     221     237 ..     212     240 .. 0.78

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 2.2
       TPR_9 36 GlllaqlGclsaAladLe 53
                G + a+lG +++A +++ 
  EPX71063.1 46 GEAFAELGEIKKAKNAFR 63
                788999****99999886 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 1.8
       TPR_9  11 weralavverllllaPddp 29 
                 ++r l ++ rl +l+++d+
  EPX71063.1  98 YDRGLNILSRLYQLNSNDV 116
                 689999999*999999986 PP

  == domain 3  score: 12.3 bits;  conditional E-value: 0.00014
       TPR_9   6 ireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeayla 57 
                 +ree  +++ ++ ++ l++++  +e +   + ++  + ++ +A ++L+ +l 
  EPX71063.1 139 MREEAESQCEKYTNLALQVDHTNAEALQTLASMRISQQNFDEAKEALQECLK 190
                 7888899999***************************************994 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 3.6
       TPR_9  45 lsaAladLeaylalapd 61 
                 +++++ dL  yl++++d
  EPX71063.1 221 MHQEAHDLLIYLQKEDD 237
                 67888888888887765 PP

>> DUF5594  Domain of unknown function (DUF5594)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00022      0.23      40      78 ..     202     241 ..     169     255 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00022
     DUF5594  40 llpt.rlrisaarigigedlrryafdlnlyltwdddeivr 78 
                  lpt  +r s ar  i  ++++ a+dl +yl  +ddeiv 
  EPX71063.1 202 DLPTyAVRTSVARLLIEVEMHQEAHDLLIYLQKEDDEIVD 241
                 567735999*****9999********************86 PP

>> PI3K_P85_iSH2  Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       1.5   1.6e+03      45      61 ..      50      66 ..      39      74 .. 0.68
   2 ?   11.7   3.5   0.00014      0.15      24     116 ..      93     194 ..      82     225 .. 0.78

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.5
  PI3K_P85_iSH2 45 eeiqlkrqaleaFneai 61
                    e+ + + a +aF+e i
     EPX71063.1 50 AELGEIKKAKNAFRESI 66
                   56666677777777755 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 0.00014
  PI3K_P85_iSH2  24 kqlqekskeydqlkeeynkiseeiqlkrqaleaFneaikmFeeqiklqekfskeaq.........ehEieklqenleqlksrlkelhsskekLeed 110
                    k l    + ++ l+  y+  s+++++k+  + a+  + ++F   + + e+ +++++         +h + +  + l+ ++   +++ ++ke L+e 
     EPX71063.1  93 KSLMLYDRGLNILSRLYQLNSNDVDVKKKLQGAYCSVAELFMTDLCMREEAESQCEkytnlalqvDHTNAEALQTLASMRISQQNFDEAKEALQEC 188
                    5555666778889999***************************************55566666667777777777888888888899999999998 PP

  PI3K_P85_iSH2 111 lkqqke 116
                    lk+  +
     EPX71063.1 189 LKSISK 194
                    886443 PP

>> TPR_20  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.1     0.026        28      17      73 ..      34      90 ..      15     105 .. 0.71
   2 ?    6.8   0.7    0.0082       8.6      14      54 ..     154     194 ..     144     201 .. 0.84
   3 ?    3.9   0.2     0.066        70      23      53 ..     207     237 ..     194     241 .. 0.88
   4 ?   -1.8   0.0       3.9   4.1e+03       8      29 ..     254     275 ..     252     281 .. 0.63

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.026
      TPR_20 17 anpddldarldlAlallaagryeeAleqLleilkrdrkweddaarkqllkifealgs 73
                a+ +d  a+  l +a ++ g+ ++A +++ e ++r  + e+d   ++ l + +++++
  EPX71063.1 34 ASDNDGRAHEMLGEAFAELGEIKKAKNAFRESIRRSDNLEEDNGYEKYLWMAQIIED 90
                566677777778888888888888888888888888888888777766666666555 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0082
      TPR_20  14 alaanpddldarldlAlallaagryeeAleqLleilkrdrk 54 
                 al+ + ++ +a   lA   +++++ +eA e+L e lk+ +k
  EPX71063.1 154 ALQVDHTNAEALQTLASMRISQQNFDEAKEALQECLKSISK 194
                 56678899999999999999999999999999999987655 PP

  == domain 3  score: 3.9 bits;  conditional E-value: 0.066
      TPR_20  23 darldlAlallaagryeeAleqLleilkrdr 53 
                 + r  +A++l++ + ++eA ++L+ + k+d 
  EPX71063.1 207 AVRTSVARLLIEVEMHQEAHDLLIYLQKEDD 237
                 56889*******************9988876 PP

  == domain 4  score: -1.8 bits;  conditional E-value: 3.9
      TPR_20   8 laeleaalaanpddldarldlA 29 
                  ++l+++ +a+ dd++  l  A
  EPX71063.1 254 AQNLQEQGNASEDDIKELLISA 275
                 5667777777777766555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1436  (0.0800937); expected 358.6 (0.02)
Passed bias filter:                      728  (0.0406046); expected 358.6 (0.02)
Passed Vit filter:                        89  (0.00496402); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.73u 0.40s 00:00:01.12 Elapsed: 00:00:00.60
# Mc/sec: 1688.64
//
Query:       EPX71064.1  [L=458]
Description: tRNA (guanine-N2-)-methyltransferase catalytic subunit Trm11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-08   34.4   0.0    4.6e-06   26.4   0.0    2.2  1  UPF0020   Putative RNA methylase family UPF0020
  ------ inclusion threshold ------
       0.02   14.2   0.0      0.031   13.6   0.0    1.2  1  N6_Mtase  N-6 DNA Methylase


Domain annotation for each model (and alignments):
>> UPF0020  Putative RNA methylase family UPF0020
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   0.0   5.2e-10   4.6e-06       3     139 ..     208     325 ..     207     331 .. 0.82

  Alignments for each domain:
  == domain 1  score: 26.4 bits;  conditional E-value: 5.2e-10
                 SS-SS---SS-HHHHHHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHH.....HHHHH CS
     UPF0020   3 yRefngpapLketLAaalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqg.....areNa 96 
                 +R++ g ++  ++L+    ++a + pg+ ++DP+ G+G++l      ga  +                          gsD+d r ++g      r+N 
  EPX71064.1 208 RRNYIGITSFDAELSLITAQMAMAMPGKLIYDPFVGTGSFLYTCSYFGAFTM--------------------------GSDIDGRQMRGkggksIRSNF 280
                 6888899999999999999*********************998888887777..........................999999988763332258999 PP

                 HHTT-GGG.EEEEE--GGG--STTS.---EEEE----------HH CS
     UPF0020  97 ekagvgdl.iefsqadaakLrlkeg.evdvivtnpPYGerlgskk 139
                  +++++++  ++ + d+++ +l+e+   d+iv++pPYG r g+kk
  EPX71064.1 281 TQYQLAGSfLDVFTGDVTNCPLRENfLLDAIVCDPPYGVRAGAKK 325
                 9999876426788888888884444489**************997 PP

>> N6_Mtase  N-6 DNA Methylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   3.4e-06     0.031      33     143 ..     220     323 ..     218     357 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 3.4e-06
    N6_Mtase  33 evsklivellepksgesvyDpacGsggllvqaekvlkeedgktkelsiyGqeknettyrLakmNlllhgieykkvkirlgdtlekpkfekdkkfdvvva 131
                 e+s + ++++   +g+ +yDp +G+g++l + + +     + t    i G ++  +  +  + N+   + + + +++ +gd  + p  e +  +d++v 
  EPX71064.1 220 ELSLITAQMAMAMPGKLIYDPFVGTGSFLYTCSYF----GAFTMGSDIDGRQMRGKGGKSIRSNFTQYQLAGSFLDVFTGDVTNCPLRE-NFLLDAIVC 313
                 56778899999999***************998876....57788888889999999999999999999999999999999999999999.9999***** PP

    N6_Mtase 132 Nppfnqkewkek 143
                  pp++ +  + +
  EPX71064.1 314 DPPYGVR--AGA 323
                 ****998..333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (458 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       280  (0.0156172); expected 358.6 (0.02)
Passed bias filter:                      267  (0.0148921); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.70u 0.34s 00:00:01.04 Elapsed: 00:00:00.57
# Mc/sec: 2440.63
//
Query:       EPX71065.1  [L=342]
Description: metallopeptidase Pgp2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.9e-88  294.5   0.0      1e-87  294.3   0.0    1.0  1  Peptidase_M22  Glycoprotease family
  ------ inclusion threshold ------
        0.2   11.3   0.0       0.38   10.4   0.0    1.4  1  NUC173         NUC173 domain


Domain annotation for each model (and alignments):
>> Peptidase_M22  Glycoprotease family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  294.3   0.0   1.2e-91     1e-87       2     270 ..      28     307 ..      27     308 .. 0.95

  Alignments for each domain:
  == domain 1  score: 294.3 bits;  conditional E-value: 1.2e-91
                    CEXEEEEEEEEE....S.SSSHHHHHHHHHHHHHHHHHHHHHHHTSTGGGEEEEEEEEESS-HHHHHHHHHHHHHHHHHCT--EEEEEHHHHHHHC CS
  Peptidase_M22   2 vlanvvasqkelhakyG.GvvPelasraHserllplieealaeaglsledldaIavtkgPGlftgLrvGvsfAkglalalnkPlvgVnhleahala 96 
                    vlanv ++++   +++G G++P++++r+H+ +++pl+++a+aea++s++++d+I++tkgPG + +L  ++ +A++l+l ++kPlv+Vnh+++h+++
     EPX71065.1  28 VLANVRHTYN---TPPGqGFLPSDTARHHRAWIIPLMKQAFAEAKISFSQIDCICFTKGPGIGAPLNSVALVARTLSLMFKKPLVAVNHCIGHIEM 120
                    6778888886...89999****************************************************************************** PP

                    CHCT.SECSSCEEEEESSSTEEEEEECTTEEEEEEEESSSEHHHHHHHHHHHHT..SSCCH..HHHHHHCTC.S.......EETTEEE.CHHHHHH CS
  Peptidase_M22  97 arle.ekeefPvvllvsGghtqvylvkegryeilgetlddaagealdkvarllglpypggp..kieklakeg.kkiefprplkgldfsfsGlktav 188
                    +r e ++ ++Pvvl+vsGg+tqv+++++++y+i+getld+a+g++ld++ar++gl++ ++p  +i + ak+g + +e+p+++kg+d+sfsGl + v
     EPX71065.1 121 GR-EiTGAQNPVVLYVSGGNTQVIAYSQRKYRIFGETLDIAIGNCLDRFARVIGLSNAPSPgyNIMQEAKRGtQFVELPYTVKGMDCSFSGLLSGV 215
                    **.55988******************99*****************************777777*********888*******************99 PP

                    HHHHST..T........HHHHHHHHHHHHHHHHHHHHHHHHHHCTBSEEEEESGGGGXHHHHHCHCCHHHHTTSEEEXXXHHHHSSXCHHHH CS
  Peptidase_M22 189 lkelek..e........vedlaasfqeavvdhlvekteralklpkakelvilGGvaankrLrealeeeaeelglkliiPplkyctdnaamia 270
                      ++++  +        ++dl++s+qe+ +++lve+tera+++ +a++++i+GGv++n rL++++ e++ ++g+k++++++++c dn++mia
     EPX71065.1 216 EAAANEamDenskrkitKQDLCYSLQENGFAMLVEITERAMAHVGADSVLIVGGVGCNDRLQQMMGEMCLDRGAKVYATDERFCIDNGIMIA 307
                    99995544257899*****************************************************************************8 PP

>> NUC173  NUC173 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   4.2e-05      0.38      92     116 ..      48      72 ..      24      78 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 4.2e-05
      NUC173  92 eklsegraWLLPlLrdnvrnaeLaf 116
                 ++ +  raW++Pl++++  +a+++f
  EPX71065.1  48 DTARHHRAWIIPLMKQAFAEAKISF 72 
                 567899***************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       290  (0.0161749); expected 358.6 (0.02)
Passed bias filter:                      273  (0.0152267); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.34s 00:00:00.98 Elapsed: 00:00:00.55
# Mc/sec: 1862.67
//
Query:       EPX71066.1  [L=1332]
Description: DNA replication endonuclease-helicase Dna2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.3e-51  172.9   0.1    7.4e-36  123.9   0.0    2.5  2  Dna2             DNA replication factor Dna2
    5.3e-50  169.8   0.0    1.2e-49  168.7   0.0    1.6  1  AAA_12           AAA domain
    1.1e-29  104.0   0.0      1e-14   55.0   0.0    2.8  2  AAA_11           AAA domain
    2.2e-10   40.6   0.0    3.7e-10   39.8   0.0    1.3  1  AAA_30           AAA domain
    3.4e-09   37.2   0.0    7.2e-09   36.1   0.0    1.6  1  AAA_19           AAA domain
    8.2e-07   29.0   0.5       0.61    9.8   0.0    4.6  4  Viral_helicase1  Viral (Superfamily 1) RNA helicase
    6.8e-06   26.3   0.1     0.0019   18.3   0.1    2.6  2  Cas_Cas4         Domain of unknown function DUF83
    7.2e-05   22.5   0.4    0.00019   21.1   0.0    1.9  2  UvrD-helicase    UvrD/REP helicase N-terminal domain
    0.00011   22.1   0.0    0.00029   20.7   0.0    1.7  1  Helicase_RecD    Helicase
     0.0021   17.7   0.1     0.0037   16.9   0.1    1.3  1  SRP54            SRP54-type protein, GTPase domain
  ------ inclusion threshold ------
      0.013   15.3   0.0      0.027   14.2   0.0    1.5  1  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
      0.027   14.9   0.0      0.063   13.7   0.0    1.5  1  AAA_16           AAA ATPase domain
       0.04   13.3   0.0      0.072   12.4   0.0    1.3  1  FtsK_SpoIIIE     FtsK/SpoIIIE family
      0.073   12.0   0.0       0.18   10.8   0.0    1.5  2  MeaB             Methylmalonyl Co-A mutase-associated GTPase 
        0.1   12.6   0.4       0.64   10.0   0.0    2.6  3  ResIII           Type III restriction enzyme, res subunit
       0.11   11.0   0.1       0.18   10.4   0.1    1.2  1  DUF853           Bacterial protein of unknown function (DUF85
       0.13   12.1   0.4       0.51   10.2   0.4    2.0  1  T6PP_N           Trehalose-6-phosphate phosphatase N-terminal
       0.15   11.6   0.1       0.55    9.7   0.0    1.9  2  AAA_7            P-loop containing dynein motor region
       0.91    9.6   6.6      0.094   12.8   0.3    2.6  3  DUF87            Helicase HerA, central domain


Domain annotation for each model (and alignments):
>> Dna2  DNA replication factor Dna2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.9   0.0   7.9e-39   7.4e-36       3     141 ..     372     511 ..     370     515 .. 0.96
   2 !   46.7   0.0   3.5e-15   3.3e-12     167     203 .]     517     553 ..     511     553 .. 0.88

  Alignments for each domain:
  == domain 1  score: 123.9 bits;  conditional E-value: 7.9e-39
        Dna2   3 kseekktvvLrddWaetsvekgdiihivgkfe.eekiiidnesnllIlhPdlLvsaTsvanslsClRravLqerlkvsgesskamliGtilHelfqkal 100
                 ++e  k+v+Lr+dW +t+v +gd + ++++f+  +++iidn+++++I+hP+lL+saT+va+s+sC+R+a L++r+   g ++k+++ G+ilH+lfq+al
  EPX71066.1 372 SDEILKQVFLREDWLDTPVYIGDLVYLEAEFNsLREAIIDNSKGFVIVHPKLLLSATAVAESFSCMRKAALSDRVVNYGLPTKPTVAGNILHDLFQSAL 470
                 5666799*************************9999***************************************999********************* PP

        Dna2 101 leeeldkekleelldklleknleelyalglteeeakeeike 141
                 +++e + ++++++l++ ++k++ ++y ++l+++e++eei++
  EPX71066.1 471 KDQENAVTNINSILEDSIKKYMIDIYFADLKVDECREEISA 511
                 **************************************986 PP

  == domain 2  score: 46.7 bits;  conditional E-value: 3.5e-15
        Dna2 167 kkekkeklsiskvldiEEniwspkyGLKGkiDatvev 203
                 ++e+ +++si+k+ld+EE+iwspkyGLKG+iDatvev
  EPX71066.1 517 SNERGKNISIQKLLDVEESIWSPKYGLKGNIDATVEV 553
                 3455569****************************97 PP

>> AAA_12  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  168.7   0.0   1.2e-52   1.2e-49       3     197 ..    1080    1286 ..    1078    1288 .. 0.95

  Alignments for each domain:
  == domain 1  score: 168.7 bits;  conditional E-value: 1.2e-52
      AAA_12    3 rSlferllkkekekvvlLdtqYRmhpeIsrfpsklfYkgkLkdaesvkkrele...................aqealeepleplvfidvekseeeke 80  
                  +Slf+ l++k++e++ +L+ qYRm+ +I ++ ++l+Y+g+L ++++  + ++                    ++++l +p + +vf++++  ++ ++
  EPX71066.1 1080 KSLFKLLSEKHPEAIATLKLQYRMNGDINSLCNNLIYGGNLLCGSNEVSVNKLylplnkvptkkpgiitnmsWIHHLLNPDSSVVFYNTDLLNNLEN 1176
                  7********************************************6666666668899999************************************ PP

      AAA_12   81 kkeksyiNeeEaelvvklvekllkkgseeerkkigvitpYraqvellkkklkekeeeksekeievntvdgfQGrekdviilslVRsnekkeig.flk 176 
                  kk+  + N++Ea+l++  v++ll+ g+ee  k+ig+i+ Y++qv+l++++lk++ee      +e+nt d++QGr+kd+i++s+VRsn +k++g +l+
  EPX71066.1 1177 KKDRILENRTEASLLACAVRSLLEMGVEE--KHIGIISIYKSQVNLIEHELKSHEE------LEINTADKYQGRDKDIIFISFVRSNLRKNVGdLLR 1265
                  *99**************************..*********************5443......79********************************* PP

      AAA_12  177 derrlNValTRAkskliivGn 197 
                  d++r+NVal+RAk k+i++G+
  EPX71066.1 1266 DWHRINVALSRAKVKCIMFGS 1286
                  *******************97 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.2   0.0     5e-15   4.8e-12       2     108 ..     902     989 ..     901     998 .. 0.95
   2 !   55.0   0.0   1.1e-17     1e-14     190     260 ..    1003    1070 ..     990    1071 .. 0.92

  Alignments for each domain:
  == domain 1  score: 46.2 bits;  conditional E-value: 5e-15
      AAA_11   2 lndsqreaiksalseseitliqGPPGtgKTktivellsqllsrrkseeeksakpriLvCapSNaAvDellerllrglldsegekykpkivRvgneeeri 100
                 ln++q  a+k++   ++ +li G PGtgKT+ti+ l+ +           ++++ iL+++ ++ AvD++l++l           ++ +i+R+g++  +i
  EPX71066.1 902 LNEDQISALKKCQAANNYALILGMPGTGKTTTIARLIISF---------LRKGASILLTSFTHSAVDNILLKLQY---------SNYDILRLGSSH-KI 981
                 8************************************999.........799********************999.........999*********.9* PP

      AAA_11 101 seavksvs 108
                 +++vk+++
  EPX71066.1 982 HPKVKEFC 989
                 *****998 PP

  == domain 2  score: 55.0 bits;  conditional E-value: 1.1e-17
      AAA_11  190 eevldeaeivltTlsgagsklleklakkfdvviIDEAaqavEpstliPlrlgakkvvLvGDpkQLpatvis 260 
                  +e+ +  +iv++   g+ ++l++    kfd++iIDEA+q   p +l Pl +  +k++LvGD+ QLp+ v++
  EPX71066.1 1003 KEFYEAPQIVACSALGVYHPLFQVR--KFDYCIIDEASQIPLPVCLGPLMHT-EKFILVGDHYQLPPLVKN 1070
                  7888899**********99999999..9***********************9.***************986 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.8   0.0   3.9e-13   3.7e-10       2     131 ..     902    1067 ..     901    1106 .. 0.91

  Alignments for each domain:
  == domain 1  score: 39.8 bits;  conditional E-value: 3.9e-13
      AAA_30    2 lnaeQaaavealltsgdrvavltGpAGtGKttalkalreaweaaggrviglAptgkaAkvLaeelgieastiakllkrlk................. 81  
                  ln++Q +a+++  + ++ +a++ G +GtGKtt+++ l   + ++g ++++ + t+ a +++  +l+   + i +l +++k                 
  EPX71066.1  902 LNEDQISALKKCQAANN-YALILGMPGTGKTTTIARLIISFLRKGASILLTSFTHSAVDNILLKLQYSNYDILRLGSSHKihpkvkefcrtaddipn 997 
                  89********9998887.*******************999999*****************99999999999999999999999999999******** PP

      AAA_30   82 ........................grarlepgtllivDEagmvdtkqlaallkaaekagakvilvGDerQlasV 131 
                                             ++++ +  i+DEa+ +        l + ek     ilvGD+ Ql++ 
  EPX71066.1  998 dlefikefyeapqivacsalgvyhPLFQVRKFDYCIIDEASQIPLPVCLGPLMHTEK----FILVGDHYQLPPL 1067
                  ***********************977788899**************99888888877....**********985 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.1   0.0   7.6e-12   7.2e-09       6     143 ..     912    1066 ..     906    1069 .. 0.72

  Alignments for each domain:
  == domain 1  score: 36.1 bits;  conditional E-value: 7.6e-12
      AAA_19    6 e.alkekvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAakelrerlaalgae......atTiHrlal........ldfddlltea 87  
                  + +++++  l+++ pGtGKT+++   +  +++ g    ++ill +ft+ A++++  +l+  + +       +                 + d++ + 
  EPX71066.1  912 KcQAANNYALILGMPGTGKTTTIARLIISFLRKG----ASILLTSFTHSAVDNILLKLQYSNYDilrlgsSH------KihpkvkefCRTADDIPND 998 
                  356788999***********************99....89**************999955444455555533......0444555673444444455 PP

      AAA_19   88 lelle................eaeeekklqeee.llivDEfqdvd.elqyrLlkallgekkklllvGDpdQliy 143 
                  le+++                + +   ++ +++ + i+DE++++  ++    l  l+ +++k++lvGD+ Ql++
  EPX71066.1  999 LEFIKefyeapqivacsalgvY-HPLFQV-RKFdYCIIDEASQIPlPVC---LGPLM-HTEKFILVGDHYQLPP 1066
                  6666666667777778877652.334456.4555**********97776...55666.4446**********97 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0      0.05        47     113     184 ..     575     644 ..     569     672 .. 0.69
   2 !    7.3   0.0    0.0037       3.5       2      21 ..     921     940 ..     920     964 .. 0.81
   3 !    9.8   0.0   0.00065      0.61      60     124 ..    1026    1088 ..    1013    1134 .. 0.78
   4 ?    2.1   0.0      0.14   1.3e+02     175     232 ..    1223    1283 ..    1162    1285 .. 0.72

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.05
  Viral_helicase1 113 hlpsslshrvgrrttyllpsdvaeilsakvgteveversgelkvetepkgqekvlvyltftqalkealgvr...e 184
                      +++ s+sh+ +   + ll sd+++i+ ++    +++e+s+ +  e +++ q   +  l  +++++++++ r    
       EPX71066.1 575 KYINSISHFAQSLLYTLLVSDRYNIRVQN-ALLCYLENSSLVDLEASMS-Q---IRGLLIARNTLAQHNIRrslP 644
                      688999***********************.9999999999993333333.3...444445555566666654552 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0037
  Viral_helicase1   2 vvhGvpGcGKStlirkllrt 21 
                      ++ G+pG GK+t i +l+ +
       EPX71066.1 921 LILGMPGTGKTTTIARLIIS 940
                      689***********999876 PP

  == domain 3  score: 9.8 bits;  conditional E-value: 0.00065
  Viral_helicase1   60 stkgkililDEylllhaGyill.laalskaklvilfGDplQipfhsrnasfllahlpsslshrvgr 124 
                         k++++i+DE+ + +   + + l  l + + +il+GD++Q p   +n+++    l++sl ++ + 
       EPX71066.1 1026 VRKFDYCIIDEASQIP---LPVcLGPLMHTEKFILVGDHYQLPPLVKNPKAAKGGLVKSLFKLLSE 1088
                       34699***********...6775667889999***********99999988877777777555444 PP

  == domain 4  score: 2.1 bits;  conditional E-value: 0.14
  Viral_helicase1  175 alkealgvrevttvhevqGltfdkVtlvllketdlelis...esrenllvAlTRhrkslvi 232 
                       ++++++ + e++t    qG   d   +   +++ ++ +    ++ +   vAl+R++ +++ 
       EPX71066.1 1223 HELKSHEELEINTADKYQGRDKDIIFISFVRSNLRKNVGdllRDWHRINVALSRAKVKCIM 1283
                       2333444447999999999999998765554444432225676799999******998875 PP

>> Cas_Cas4  Domain of unknown function DUF83
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0     0.021        20       3      73 ..     428     501 ..     426     510 .. 0.73
   2 !   18.3   0.1     2e-06    0.0019      50     161 ..     554     663 ..     525     664 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.021
    Cas_Cas4   3 tkiqyyliCkrklwlisheitleensetvelGkllhe...esyerekkevelsesikiDvvekekeklvvvEvK 73 
                 t++   + C rk++l  + +++    +   +G +lh+   ++ ++++++v+  +si  D ++k+  +++  ++K
  EPX71066.1 428 TAVAESFSCMRKAALSDRVVNYGLPTKPTVAGNILHDlfqSALKDQENAVTNINSILEDSIKKYMIDIYFADLK 501
                 67888899**********9999998888888******7642222233444434788888888777777776666 PP

  == domain 2  score: 18.3 bits;  conditional E-value: 2e-06
    Cas_Cas4  50 elsesikiDvvekekeklvvvEvKkskkkeeaa.klQllyYlllLe.kkgveikeGvleypkekkreevelteelreelekaikeiee.iissekppkv 145
                  l +s + D+++     +v+ E+K +k ++  +  +Q l Y ll+  + +++++++ l y+++   +++e +  + + l  a + + +  i+++ p   
  EPX71066.1 554 LL-KSSSEDILT----LTVPLELKTGKYINSIShFAQSLLYTLLVSdRYNIRVQNALLCYLENSSLVDLEASMSQIRGLLIARNTLAQhNIRRSLPAML 647
                 44.666667777....7788*******997765599*********99*************************999998888877765505666677778 PP

    Cas_Cas4 146 kkkkiCkkCayaelCl 161
                 k+++ Ck+C   + C+
  EPX71066.1 648 KSEHQCKRCYAVNECF 663
                 8889*****9888887 PP

>> UvrD-helicase  UvrD/REP helicase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.2       6.5   6.2e+03     136     200 ..     163     228 ..     118     276 .. 0.56
   2 !   21.1   0.0     2e-07   0.00019       4      66 ..     905     966 ..     902    1000 .. 0.82

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 6.5
                    HHHHSCHSHTTTTHHHHHHHHHHHHHHC.CCCCHHHHCCCHHHHHCHHHHHHHHHHHTTCCTTHHC CS
  UvrD-helicase 136 kelleksaddslnldkkkleklikelsk.srnikkeelslskskaeelrelvskakekqlspkelk 200
                    k++le+s  ds++l+ k  +k++  l + s n + +e+ + +s ++ +  lvs +++ + s+++ +
     EPX71066.1 163 KRILERSFSDSKKLSPKRNKKESPSLYRgSFNEDNQENYGLASPLDRIPSLVSVIQNAKSSSQSVN 228
                    233333333333333333333322222202333345555555555555555555555555555444 PP

  == domain 2  score: 21.1 bits;  conditional E-value: 2e-07
                    HHHHHHHS...-SSEEEEEE-TTSSHHHHHHHHHHHHHHTSSSTGGGEEEEESSHHHHHHHHHHHH CS
  UvrD-helicase   4 eqreaias...lggpilveAsAGsGKTfvlaerilrlikeeeiepdrilvvTFTnkAaeElkeRie 66 
                    +q +a+++    ++  l++  +G+GKT+++a +i+  ++++     +il+  FT  A + +  +++
     EPX71066.1 905 DQISALKKcqaANNYALILGMPGTGKTTTIARLIISFLRKG----ASILLTSFTHSAVDNILLKLQ 966
                    5555555444478889*************************....9***********998877766 PP

>> Helicase_RecD  Helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   3.1e-07   0.00029       2     118 ..     922    1056 ..     921    1060 .. 0.66

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 3.1e-07
  Helicase_RecD    2 ltAdRGRGKSaalGlalaaliaegksnilvtapskenvktlfefla.kglealglke.eekkkkaekaelrvr...kqrieyiapdellklkeq 90  
                     + + +G+GK+++++ ++ +++++g  +il+t+ ++++v++++  l+ ++ + l+l + + k + + k  +r+     + +e+i+    + +  +
     EPX71066.1  922 ILGMPGTGKTTTIARLIISFLRKGA-SILLTSFTHSAVDNILLKLQySNYDILRLGSsH-KIHPKVKEFCRTAddiPNDLEFIKEFYEAPQIVA 1013
                     77889******************87.9***********998877741444555554442.3222222222222467444444443333333222 PP

  Helicase_RecD   91 a...............dllvvDEAAaiplpllkkllekfkrvv 118 
                     +               d  ++DEA++iplp+    l + ++++
     EPX71066.1 1014 CsalgvyhplfqvrkfDYCIIDEASQIPLPVCLGPLMHTEKFI 1056
                     2345677888888999**************9766555666555 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.1   3.9e-06    0.0037       2      36 ..     918     952 ..     917     961 .. 0.91

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 3.9e-06
                 EEEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEE CS
       SRP54   2 nvillvGlqGaGKTttlaKLaallkkegkkvllva 36 
                 n+ l++G+ G+GKTtt+a+L   + ++g ++ll +
  EPX71066.1 918 NYALILGMPGTGKTTTIARLIISFLRKGASILLTS 952
                 6789***************************9976 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   2.9e-05     0.027      23     106 ..     907     991 ..     884    1000 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.9e-05
      RuvB_N  23 ieaakkreealdhvllyGpPGlGkt.tlakiiakelgvklkitsgPvlekagdlaalltnleekdvlfideihrlsraveevlys 106
                 i+a kk + a ++ l+ G PG Gkt t+a++i + l     i  +   + a d + l  + ++ d+l +   h+++++v+e+  +
  EPX71066.1 907 ISALKKCQAANNYALILGMPGTGKTtTIARLIISFLRKGASILLTSFTHSAVDNILLKLQYSNYDILRLGSSHKIHPKVKEFCRT 991
                 7889999999**************7368999999988877777777888888888888888899***************998655 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   6.7e-05     0.063      21      63 ..     915     956 ..     904     979 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 6.7e-05
      AAA_16  21 sgrpelvllsGesGvGKsslvrellralekdggiflrgkcdql 63 
                 +   ++ l+ G++G+GK++ + +l  ++ ++g+  l + ++++
  EPX71066.1 915 AAN-NYALILGMPGTGKTTTIARLIISFLRKGASILLTSFTHS 956
                 222.899**************9888899999877766666665 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   7.6e-05     0.072      37      64 ..     914     942 ..     882     946 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 7.6e-05
                   GS-..SEEEE--TTSSHHHHHHHHHHHHH CS
  FtsK_SpoIIIE  37 kma.shllvaGatgsGKStalntLilSla 64 
                   ++a +  l++G +g+GK+t++  Li+S +
    EPX71066.1 914 QAAnNYALILGMPGTGKTTTIARLIISFL 942
                   2334558*******************987 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       4.3     4e+03      94     121 ..      93     120 ..      88     120 .. 0.89
   2 ?   10.8   0.0   0.00019      0.18      34      60 ..     922     948 ..     902     956 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 4.3
                 EEEE-----HHHHHHHHHHHHHHHHHTT CS
        MeaB  94 iRslpsrGalGGlaaktrevvllleaaG 121
                 +R + + G+ G ++  t + ++l + +G
  EPX71066.1  93 LRNSQTMGHEGPVSFSTSKELALQDKLG 120
                 79999*************9999998776 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00019
                 EEE-TTSSHHHHHHHHHHHHHCTT--E CS
        MeaB  34 ltGvPGaGkstlvealglelrrrGkrv 60 
                 + G+PG+Gk t++ +l++++ r+G  +
  EPX71066.1 922 ILGMPGTGKTTTIARLIISFLRKGASI 948
                 679********************9865 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1       4.6   4.3e+03      62     118 ..     161     224 ..     143     247 .. 0.71
   2 ?   -2.7   0.0       5.3     5e+03      62     120 ..     420     489 ..     407     513 .. 0.54
   3 ?   10.0   0.0   0.00067      0.64       6      53 ..     904     946 ..     891    1007 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 4.6
                 SSHHHHHHHHHHGGGGTGG.........GEEEESSS-B--.........-SEEEEEHHHHHHTH CS
      ResIII  62 prkslleqtleefkkflseayke.....igkkvsgdkkka..kekdstnkkilvttiqsldads 118
                 ++k +le+  ++ kk++++ +k+       +++++d++++   ++  + +  lv+ iq ++++s
  EPX71066.1 161 NNKRILERSFSDSKKLSPKRNKKespslYRGSFNEDNQENygLASPLDRIPSLVSVIQNAKSSS 224
                 6777888888888888888777665555444455555555666666677777777777777666 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 5.3
                 SSHHHHHHHH..HHGGGGTGG.................GEEEESSS-B--........-SEEEEEHHHHHHTH.. CS
      ResIII  62 prkslleqtl..eefkkflseayke.............igkkvsgdkkka.kekdstnkkilvttiqsldadsee 120
                 + k ll+ t   e f+++ + a ++             +g++++       ++++ ++ +  vt+i+s+ +ds +
  EPX71066.1 420 HPKLLLSATAvaESFSCMRKAALSDrvvnyglptkptvAGNILH-----DlFQSALKDQENAVTNINSILEDSIK 489
                 44444444433566666666655555544444332222222222.....13444566677777777777777643 PP

  == domain 3  score: 10.0 bits;  conditional E-value: 0.00067
                 HHHHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S... CS
      ResIII   6 eyQeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgk 53 
                 e Q++a+++         ++ +li    GtGKT ++a+li ++l+kg 
  EPX71066.1 904 EDQISALKKCQ-----AANNYALILGMPGTGKTTTIARLIISFLRKGA 946
                 44444444443.....344455566667*************9999865 PP

>> DUF853  Bacterial protein of unknown function (DUF853)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.1   0.00019      0.18      12      54 ..     908     950 ..     897     955 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00019
      DUF853  12 elalalklanrhGliaGatGtGktvtLqvlaeslseaGvpvfl 54 
                     + + an + li G  GtGkt t+  l  s+ + G +++l
  EPX71066.1 908 SALKKCQAANNYALILGMPGTGKTTTIARLIISFLRKGASILL 950
                 44567899**************************999999887 PP

>> T6PP_N  Trehalose-6-phosphate phosphatase N-terminal helical bundle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.4   0.00054      0.51      51      96 ..    1217    1262 ..    1168    1266 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00054
      T6PP_N   51 gtevlelrtteeekvrldikdEieeLekDlkFLefiqsdevenveq 96  
                  + + +e + +++e+++++  d  ++ +kD+ F++f++s+  +nv  
  EPX71066.1 1217 QVNLIEHELKSHEELEINTADKYQGRDKDIIFISFVRSNLRKNVGD 1262
                  334444444599**************************99999866 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   0.00059      0.55      26      70 ..     910     954 ..     904     966 .. 0.77
   2 ?   -2.4   0.0       3.1   2.9e+03     122     153 ..    1296    1327 ..    1281    1330 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00059
       AAA_7  26 lelllknkkpvllvGptGtGKtviikdllkkldkekylsltinfs 70 
                 l+++ ++++  l+ G  GtGKt++i +l+ ++ ++  ++l  +f+
  EPX71066.1 910 LKKCQAANNYALILGMPGTGKTTTIARLIISFLRKGASILLTSFT 954
                 67777889999****************665555466666666665 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 3.1
       AAA_7  122 piellRqlldyggwYdrkklefkeikdvqlva 153 
                   +el+  l  ++ +Y+ +  ++k+i+d +l++
  EPX71066.1 1296 MNELITLLSKNEWVYNIQPNDLKDIQDENLIS 1327
                  56888888888999999999999999987776 PP

>> DUF87  Helicase HerA, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.2       5.1   4.9e+03      87     151 ..      52     113 ..      20     186 .. 0.47
   2 ?   -2.9   0.1       6.2   5.8e+03      86     107 ..     489     510 ..     461     582 .. 0.48
   3 ?   12.8   0.3   9.9e-05     0.094      27      57 ..     921     950 ..     914     951 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 5.1
       DUF87  87 dkelkinpwsldpeelldlleeddkpaaavqrsvleealdqakakeekeklssdepveklleelk 151
                 +++ k++  +++p + ++ + e++ ++ a++   +++  d +   ++ + +  + pv ++ ++  
  EPX71066.1  52 QTKSKLQSLAFNPSQTISNITEENSSKLATKAPCFQSDTDVL---RNSQTMGHEGPVSFSTSKEL 113
                 444455555555544444444423333333333333333322...23333444444444433333 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 6.2
       DUF87  86 kdkelkinpwsldpeelldlle 107
                 k++++ i +++l+++e  + + 
  EPX71066.1 489 KKYMIDIYFADLKVDECREEIS 510
                 4444444444444444433332 PP

  == domain 3  score: 12.8 bits;  conditional E-value: 9.9e-05
       DUF87  27 AilgsTGsGKSntvavLleellekkgatili 57 
                 +ilg+ G+GK++t+a L+ + l +kga+il+
  EPX71066.1 921 LILGMPGTGKTTTIARLIISFL-RKGASILL 950
                 69********************.99***997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1332 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       741  (0.0413297); expected 358.6 (0.02)
Passed bias filter:                      542  (0.0302304); expected 358.6 (0.02)
Passed Vit filter:                        75  (0.00418317); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              19  [number of targets reported over threshold]
# CPU time: 1.07u 0.37s 00:00:01.44 Elapsed: 00:00:00.58
# Mc/sec: 6961.32
//
Query:       EPX71067.1  [L=2352]
Description: alpha-1,3-glucan synthase Mok13 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.5e-24   84.6   0.1    6.7e-19   68.6   0.0    2.6  2  Alpha-amylase    Alpha amylase, catalytic domain
    4.1e-15   56.1   0.1      8e-15   55.2   0.1    1.4  1  Glyco_transf_5   Starch synthase catalytic domain
      1e-05   25.1   0.0      2e-05   24.2   0.0    1.3  1  Glycos_transf_1  Glycosyl transferases group 1
     0.0039   17.2   0.0     0.0088   16.1   0.0    1.5  1  Glyco_transf_4   Glycosyltransferase Family 4


Domain annotation for each model (and alignments):
>> Alpha-amylase  Alpha amylase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.6   0.0   1.5e-22   6.7e-19       1     219 [.     105     351 ..     105     364 .. 0.84
   2 !   13.1   0.0   1.2e-05     0.054     282     331 ..     453     498 ..     423     503 .. 0.79

  Alignments for each domain:
  == domain 1  score: 68.6 bits;  conditional E-value: 1.5e-22
                    --CHHHHCTCCCCCCCT-SCEEE..-B-CE-S-TTTTSS-SCECCE-CCC--CCCCCCHHHHHHCTT-EEEEEE--SC--TTSCCCHCCHHSTTSG CS
  Alpha-amylase   1 GDLkGiiekLdYlkeLGvtaiwl..sPifkspqadhgYdiadytkidpefGtnedlkeLiskahekgikvilDlVvNHtsdehewfkeslkkkgep 94 
                    GD+ G+ + LdYl ++G+++i++  +P+ ++p     Y   d+t +d + Gt e++   i+++h +g+++ilDl v   +d +  fk++l+ +++ 
     EPX71067.1 105 GDIVGLKDSLDYLISIGIKVIYIagTPFLNQPWGADQYSPLDFTVLDHHSGTIEQWRDTIEEIHRRGLYLILDLTVATLGDLVG-FKKYLNTTTPF 199
                    9**********************666******************************************************9998.77777766654 PP

                    ..GGCCC-E.......................................ESS-STTC-TTTTCSCEECTTTTCEEESSS-TTS-BB-TTTCCCCCCC CS
  Alpha-amylase  95 ..krdyyiwkegk.................................eekeppnnwkslfdgsaweydekaqeyylhlflkklpdLnteneevrkel 155
                       +  ++wk+ +                                 +    +++ +++ d +a+ ++  +q   l +f++ ++ L   +++v ++l
     EPX71067.1 200 slFEHEAVWKDAQyypdwdfsneydpdcelprfwgedgapvvidyvG--CYDSDFNQYGDTEAFGTHPDWQ-RQLSKFASVQDRLRDWKPSVSEKL 292
                    44566667777777777777778889999999998888888877443..3444444567777777766664.369********************* PP

                    CC.CCCCCCTTT-SEEEETTCCCTTTCCCCHCCHCCHHHHHHHHHHHTC..CGTT-EEEEE-TT-SC CS
  Alpha-amylase 156 kd.vvkfwlekgidGfRlDvvkhvskvealesngeflheftqalnetva..srkevmtvgEvssdas 219
                    k+ ++ +    +idGfR+D + ++          +fl ++++ + e +   ++k++++ gEv +++s
     EPX71067.1 293 KRfACLVISSLDIDGFRIDKATQITV--------DFLASWAASVRECAGkyNKKNFFIPGEVTGSSS 351
                    **5555555556**************........9*******9999987788999******998765 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 1.2e-05
                    EES--TTS--HHHHTTSSTTTTHHHHHHHHHCCCTSSSEEEEETTCCCT- CS
  Alpha-amylase 282 tflgnHDqeRilsrlgddsaeaekklklaaillltlrGvpviYyGeEigm 331
                    + + nHD  R    +   ++     l   ++  ++++G+p iYyG+E+g+
     EPX71067.1 453 LGVTNHDVFRWPAIYDGVER----LLLGTMVTYFLFPGIPSIYYGDEQGL 498
                    55679999999988877772....455556667899************96 PP

>> Glyco_transf_5  Starch synthase catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.2   0.1   1.8e-18     8e-15      13     214 ..    1158    1347 ..    1143    1351 .. 0.79

  Alignments for each domain:
  == domain 1  score: 55.2 bits;  conditional E-value: 1.8e-18
  Glyco_transf_5   13 aktGGLadvvgaLpkaLaklghdvrvilPrygaikeekkeleevaelskaaedeveve.v.ekvkvaklkkdgvdvyfldnpeffdreg..lY 101 
                      +k GGL+ +++ + k L++  hd   ++P  g+++      eev +l      ev v    ++vkv+ ++ +++++++l++p f ++++  +Y
      EPX71067.1 1158 IKIGGLGVMAELMGKHLQH--HDLLWVVPCVGNVEYPV--QEEVEPL------EVVVLdQiYQVKVYIHYLSNITYLLLEAPVFRKQTTsePY 1240
                      8****************76..89********9999865..2444444......3333323699********************99755568** PP

  Glyco_transf_5  102 gdkgedyednaerfalfsraalelleklgwkpdvihahDWhtalvpallkelykerglfkkiktvftiHNlayqgrfp......kdel.aalg 187 
                       +   d    a  ++++++ ++ ++++  +  d+ h++D+h al+p++l            i++v+++HN ++qg +p      k+e+ a  +
      EPX71067.1 1241 PP-RMDDLSSAIFYSAWNQCIAGIAKR--YPIDLYHINDYHGALAPLYLLPNI--------IPCVMSLHNAEFQGLWPlrtpeeKSEVcAVYN 1322
                      55.566677788888999999999999..689*****************9977........*****************888644333334455 PP

  Glyco_transf_5  188 lpaedfekldglefygkvnflkagivy 214 
                      +  + +   + ++f + +n+l+ag+ y
      EPX71067.1 1323 ISTKVC--TNYVQFGNVFNLLHAGVSY 1347
                      553333..4667777788999998876 PP

>> Glycos_transf_1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.0   4.4e-09     2e-05      10     127 ..    1429    1547 ..    1423    1588 .. 0.81

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 4.4e-09
                       TTTTT-EEEEEESS-TTTTTHHHHHHHHHCCCCCHCSCEEEEEES.......STTHHHHHHHHHHHCTTCGGGEEECCH.SSSHHHHHHCES CS
  Glycos_transf_1   10 gknekkkiilsvgrlekeKgvdllikafallkkqlnpnvklviaG......ngeeekelkklaeelelsdnviflgevs.redleellknad 94  
                       +++e+  ++++vgr + +Kg+dl+ + ++ l +  + nv+l+ +G      ++   ++l  l++++      +++ + +  +  + +++ ad
       EPX71067.1 1429 EIDETADLLVFVGRWSMQKGIDLIADIAPILLE--DYNVQLITIGpiidlyGKFAAEKLDFLMKKYPG----RVYSRPEfTHLPPCIFSGAD 1514
                       6889999************************96..7***********998777777888888888888....888888877889999999** PP

                       EEEEEESSBSS-HHHHHHHHTT--EEEETTTTH CS
  Glycos_transf_1   95 ifvlpsisEgfGivllEAmaaglpviasnaggp 127 
                        +++ps+ E+fG+v++E    g   i   +gg+
       EPX71067.1 1515 FVLIPSRDEPFGLVAVEFGRKGALGIGARVGGL 1547
                       *****************7776666666666665 PP

>> Glyco_transf_4  Glycosyltransferase Family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0     2e-06    0.0088      48     114 ..    1240    1308 ..    1198    1330 .. 0.72

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 2e-06
  Glyco_transf_4   48 lpllkrllrslaflr....rlrrllkrekpDvvHahspaalgaallalrrrlgiplVltvHglyekrllka 114 
                      +p++ + l s  f++     ++ ++kr+ +D+ H+++++ ++a l  l     ip+V ++H+ + ++l++ 
      EPX71067.1 1240 YPPRMDDLSSAIFYSawnqCIAGIAKRYPIDLYHINDYHGALAPLYLLP--NIIPCVMSLHNAEFQGLWPL 1308
                      3333333333333320111577899999************999988888..7***********96444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2352 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       682  (0.0380389); expected 358.6 (0.02)
Passed bias filter:                      415  (0.0231469); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.14u 0.33s 00:00:01.47 Elapsed: 00:00:00.51
# Mc/sec: 14006.62
//
Query:       EPX71068.1  [L=401]
Description: ZIP zinc transporter Zrt1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      8e-64  215.9   4.6    9.2e-64  215.7   4.6    1.0  1  Zip       ZIP Zinc transporter


Domain annotation for each model (and alignments):
>> Zip  ZIP Zinc transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  215.7   4.6   5.2e-68   9.2e-64       2     332 ..      61     397 ..      60     398 .. 0.88

  Alignments for each domain:
  == domain 1  score: 215.7 bits;  conditional E-value: 5.2e-68
         Zip   2 llkilaiiaililsllgllgpllvpkiskl....lsklllslllafavGvllgtaflhLlPealealeesqleeehth.plagllvllGflllllvekl 95 
                 +++i+ai++il++sl+g+++pl +++  ++       +++ +  +f++Gv+l+taf+hLl++a+++l++++l + ++   +a +++l+++++++++e +
  EPX71068.1  61 GVRIGAIFVILFTSLIGVWLPLALSHFMHDqanlVITYFYLFCRYFGSGVILATAFIHLLAPACNKLYDPCLADLFGGyDWAPGICLISCWFMFFIEVV 159
                 689************************99988888888888999****************************9974447******************** PP

         Zip  96 ltmivek...ksshkektpkkasssssesaakksvsndkveeseekedhvaeadtdadskeelrngkqeksesekeqaseeedkeklaslkvraiilll 191
                 l+ +ve+    s+ ++++ +++s++++e++a + +s d ++++ e++      ++ +d +e + +++++++ s+  +  ee++k+ l ++  + ++l+ 
  EPX71068.1 160 LSRFVEWkygMSHCHNPNLGTHSHNHEEEGAFGIHSHDHCQDDIENRP-----GSPKDIEEIKLKSVSNTENSDLVSI-EESRKSLLYQQIGAFLVLES 252
                 *******99977788888888888888888888888888888877744.....3444445555555555555555554.5888888888888999**** PP

         Zip 192 glilHsfidGLAlGvssssstgislfiAvllHelpeelglgaiLlkaglsrkkav...llnllfaltaplGiliGilvrs..isessgaeivsgillal 285
                 g+ilHs+i+GL ++   s +++ +lf +v++H+++e+ glga+L ++ +s+   +   ++  ++al++p+G++ G++ r+  ++ s+g  +++g+l+a+
  EPX71068.1 253 GIILHSVIIGLTTA--ISGEEFRTLFPVVVFHQAFEGTGLGARLSSMAWSKGFNIqpwIMGGTYALFTPIGMAAGLGAREhwNPLSHGTYATQGVLDAI 349
                 **************..**********************************97766666*******************998******************* PP

         Zip 286 saGtflYvalvellphEllnek.gssslkqsllqllglllGfalmlll 332
                 s+G+++Y +lvell++++l +  +++++ +    l++ ++G alm+ll
  EPX71068.1 350 SSGILIYAGLVELLAQDFLFDPnRERNWLKLSFLLFCAMAGTALMALL 397
                 ********************9976667777777788999*******98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       569  (0.0317363); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.45
# Mc/sec: 2677.20
//
Query:       EPX71069.1  [L=508]
Description: Sir2 family histone deacetylase Sir2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.7e-63  213.7   0.0    2.8e-63  213.0   0.0    1.3  1  SIR2          Sir2 family
    7.8e-07   29.0   0.3    1.5e-06   28.1   0.3    1.5  1  DUF592        Protein of unknown function (DUF592)
     0.0063   16.3   0.0       0.75    9.5   0.0    2.3  2  TPP_enzyme_M  Thiamine pyrophosphate enzyme, central domain


Domain annotation for each model (and alignments):
>> SIR2  Sir2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  213.0   0.0   4.6e-67   2.8e-63       1     177 []     165     383 ..     165     383 .. 0.98

  Alignments for each domain:
  == domain 1  score: 213.0 bits;  conditional E-value: 4.6e-67
                 -GGGGGGGT---SSSTTSHHHHSCHHHHSSHHHHHHHHHHHHH..HHHHHHHHHHCCTSS--HHHHHHHHHHHTTCEEEEEES-SSSHHHHTT-S..SE CS
        SIR2   1 GAGiStesGipdfRskeGlyaklakeelaspealfskkllvee..vfyniarellaeeaepnaaHkalkklekkgkllrliTQNiDgLekkaGsk..kv 95 
                 GAGiSt++Gi dfRs++G+y++la+++l++p+++f++++++ee  +fy++a+ell+e+++++++H++++ le+k+kl++l+TQNiD+Le+++G++  kv
  EPX71069.1 165 GAGISTSLGILDFRSDNGFYSRLAQHGLSEPSEMFDIHTFREEpgIFYTFAKELLPETQHYSPSHAFIRLLEQKNKLSTLFTQNIDNLERETGLTdeKV 263
                 9*********************************************************************************************999** PP

                 EETTEEEEEEEETTTSBEEECCGGHCHHHCCTT.B-TTTCC....................................BEEEEE--CTSB-S.HHHHHHH CS
        SIR2  96 velHGslakakcvkcekkldkeelqeeieaekvpecekcgk....................................llkpdvvfFGealp.dklkkli 157
                 +++HGs+a+a+c++c++k++++ l+++i+++k++ c++c++                                    ++kpd++fFGealp + ++k+ 
  EPX71069.1 264 IQCHGSFATATCIQCKHKVEGSLLYDDIRNQKISYCTECNQrpvkkrkltsssdrafsdsnedvkeeeeeadtaqagVMKPDITFFGEALPdQFFEKVG 362
                 *******************************************************************************************66677788 PP

                 H.HHHH-SEEEEES--STSTT CS
        SIR2 158 e.kveeadlllviGtSlkVap 177
                 + ++e++dll++iGtSlkVap
  EPX71069.1 363 SgDLEKTDLLICIGTSLKVAP 383
                 89*****************98 PP

>> DUF592  Protein of unknown function (DUF592)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.1   0.3   2.5e-10   1.5e-06     103     152 ..     114     163 ..      75     164 .. 0.89

  Alignments for each domain:
  == domain 1  score: 28.1 bits;  conditional E-value: 2.5e-10
      DUF592 103 pLekkeivrlikdLqkainkvlstrlrlsnfstidhfvdklkkakkilVl 152
                 +L++ e ++l+  L++++++  s rl+l++++tid+++++l+kak i+Vl
  EPX71069.1 114 ALDEFEDLDLLPLLKEVLRREASRRLKLPQYNTIDDVIEQLHKAKNIVVL 163
                 5677777899999************************************8 PP

>> TPP_enzyme_M  Thiamine pyrophosphate enzyme, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0   0.00013      0.75       1      25 [.     147     171 ..     147     176 .. 0.91
   2 !    4.2   0.0    0.0054        32      74      90 ..     365     381 ..     346     405 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00013
                   HHHHHHHHHH-SSEEEEE-CHHCHT CS
  TPP_enzyme_M   1 iekaaellkaakrpvilvGggvars 25 
                   i++++e l++ak++v+lvG g+++s
    EPX71069.1 147 IDDVIEQLHKAKNIVVLVGAGISTS 171
                   789******************9865 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.0054
                   HHHH-SEEEEES-SSST CS
  TPP_enzyme_M  74 aleeaDlvlalGarfdd 90 
                    le++Dl++++G+ ++ 
    EPX71069.1 365 DLEKTDLLICIGTSLKV 381
                   6899*********9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (508 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       938  (0.0523175); expected 358.6 (0.02)
Passed bias filter:                      623  (0.0347482); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.61u 0.27s 00:00:00.88 Elapsed: 00:00:00.45
# Mc/sec: 3415.46
//
Query:       EPX71070.1  [L=902]
Description: hsp104-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.9e-50  170.7   0.0    7.2e-49  166.2   0.0    2.7  2  AAA_2            AAA domain (Cdc48 subfamily)
    9.6e-34  115.4   2.1    9.6e-34  115.4   2.1    3.0  2  AAA_lid_9        AAA lid domain
    2.3e-27   96.0   0.0    6.9e-15   55.6   0.0    2.8  2  AAA              ATPase family associated with various cellul
    5.9e-23   80.7   0.2      2e-22   79.1   0.2    2.0  1  ClpB_D2-small    C-terminal, D2-small domain, of ClpB protein
      3e-16   59.3   0.1    2.4e-08   34.0   0.0    3.2  2  Clp_N            Clp amino terminal domain, pathogenicity isl
    2.8e-15   56.5   0.1    8.8e-10   38.7   0.0    3.1  2  AAA_5            AAA domain (dynein-related subfamily)
    1.6e-11   44.9  10.2    9.7e-06   26.1   0.1    5.7  4  AAA_16           AAA ATPase domain
    6.8e-11   42.6   0.9      0.002   18.4   0.0    4.5  3  AAA_22           AAA domain
    3.8e-10   39.7   0.0    6.7e-07   29.2   0.0    2.7  2  Sigma54_activat  Sigma-54 interaction domain
    7.1e-07   29.1   0.0      0.039   13.7   0.0    2.6  2  IstB_IS21        IstB-like ATP binding protein
      1e-06   28.3   0.1      0.021   14.2   0.1    3.3  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
    1.7e-06   27.7   0.0     0.0024   17.4   0.0    2.4  2  AAA_7            P-loop containing dynein motor region
    3.4e-05   24.4   0.6       0.14   12.7   0.0    3.5  2  AAA_18           AAA domain
    0.00013   22.2   2.0       0.14   12.3   0.0    3.7  4  AAA_33           AAA domain
    0.00014   21.7   0.0      0.056   13.3   0.0    3.0  2  AAA_3            ATPase family associated with various cellul
    0.00018   21.5   0.5       0.94    9.3   0.0    4.0  3  ATPase_2         ATPase domain predominantly from Archaea
    0.00019   22.0   0.9       0.14   12.7   0.0    3.7  3  ABC_tran         ABC transporter
    0.00021   21.7   0.0        1.3    9.5   0.0    2.7  2  RNA_helicase     RNA helicase
    0.00034   20.4   0.0       0.96    9.1   0.0    2.6  2  AAA_24           AAA domain
    0.00059   19.6   2.0        2.2    8.0   0.3    4.1  3  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    0.00062   20.0   1.6        2.1    8.6   0.0    3.8  3  AAA_28           AAA domain
    0.00097   18.8   3.1       0.12   11.9   0.0    3.3  3  AAA_25           AAA domain
     0.0018   18.5   0.0        1.3    9.3   0.0    2.5  2  Roc              Ras of Complex, Roc, domain of DAPkinase
     0.0021   17.3   1.3        3.4    6.8   0.0    3.5  3  TIP49            TIP49 P-loop domain
      0.004   17.1   0.0        4.8    7.1   0.0    2.9  2  RsgA_GTPase      RsgA GTPase
     0.0047   17.3   0.2        7.1    7.0   0.0    3.9  3  AAA_19           AAA domain
     0.0056   16.7   0.0        4.4    7.3   0.0    2.7  2  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
     0.0057   15.8   0.2      0.031   13.3   0.0    2.3  2  T2SSE            Type II/IV secretion system protein
  ------ inclusion threshold ------
      0.011   15.5   0.0         10    5.8   0.0    3.2  2  AAA_30           AAA domain
       0.02   14.8   0.2       0.92    9.4   0.0    2.8  2  NACHT            NACHT domain
      0.025   14.4   0.2        4.1    7.1   0.0    3.6  4  AAA_21           AAA domain, putative AbiEii toxin, Type IV T
      0.031   14.4   0.0       0.16   12.0   0.0    2.1  1  Torsin           Torsin
      0.041   13.2   0.8         11    5.2   0.0    3.1  4  Zeta_toxin       Zeta toxin
      0.048   13.1   0.0        1.7    8.0   0.0    2.5  2  PhoH             PhoH-like protein
      0.055   13.2   0.1         11    5.8   0.0    3.0  3  AAA_29           P-loop containing region of AAA domain
      0.061   13.5   0.0       0.11   12.6   0.0    1.4  1  DUF5368          Family of unknown function (DUF5368)
       0.11   12.5   0.1         24    5.0   0.1    3.5  2  CbiA             CobQ/CobB/MinD/ParA nucleotide binding domai
       0.12   12.8   2.8       0.44   10.9   2.8    2.0  1  YlqD             YlqD protein
       0.16   12.1   5.9       0.62   10.2   5.9    2.0  1  Nup54            Nucleoporin complex subunit 54
       0.36   11.4  10.3        1.3    9.6  10.3    2.0  1  APG6_N           Apg6 coiled-coil region
       0.38   11.2  15.9       0.55   10.7   0.0    4.1  2  AAA_23           AAA domain
       0.65    9.3  11.0        1.2    8.4  11.0    1.4  1  DUF4407          Domain of unknown function (DUF4407)
        1.4    7.8   9.6        2.6    6.9   9.6    1.4  1  Spc7             Spc7 kinetochore protein


Domain annotation for each model (and alignments):
>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0      0.66   2.8e+02       6      28 ..     205     227 ..     200     296 .. 0.75
   2 !  166.2   0.0   1.7e-51   7.2e-49       2     169 ..     612     776 ..     611     778 .. 0.97

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.66
                 EEEE--TTSSHHHHHHHHHHHTT CS
       AAA_2   6 illlgptgvGktelakalaellf 28 
                   l+g+ gvGkt +a+ la+ + 
  EPX71070.1 205 PVLIGEPGVGKTSIAEGLARRII 227
                 5689999**********998764 PP

  == domain 2  score: 166.2 bits;  conditional E-value: 1.7e-51
                 ----EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTS............EEEEETGGG--------- CS
       AAA_2   2 piisilllgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG............ivllDEidKihpkessga 88 
                 pi+s+l++gp+g+Gkt+l+kala +lf ++e+++ir+d+se++e    +h+vsrligappgyvg+e gG            ++l+DE++K++p      
  EPX71070.1 612 PIASFLFCGPSGTGKTLLTKALAGFLF-DDENAMIRIDMSEYME----KHSVSRLIGAPPGYVGHEAGGqlteqlrrrpysVILFDEVEKAAP------ 699
                 89*************************.****************....*********************************************...... PP

                 ----HHHHHHHHHHHH--EE-------EE-TT-EEEEEE--TTHHHHTTTS-S.TTTTSGGG--HHHHHHTT--HHHHTT-- CS
       AAA_2  89 dvSregVqrdLLqileggtltdkqgrkvdtknilfImtgafgsskisdesrsk.eeeeekkkeeveeelkkglipEllgRlp 169
                      +V+++LLq+l++g++t  qg+ vd kn ++Imt+++g++   ++++++  + + +++e+v + ++ +++pE+l+R+ 
  EPX71070.1 700 -----DVLTVLLQVLDEGRITSGQGQVVDAKNSVIIMTSNLGAEYLTTDQEDDtGKIDATAREMVLNTIRGFFRPEFLNRIS 776
                 .....****************************************9998877778999999*******************97 PP

>> AAA_lid_9  AAA lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.4   2.1   2.3e-36   9.6e-34       1     102 [.     345     446 ..     345     448 .. 0.98
   2 ?    2.9   0.2      0.24     1e+02      65     101 ..     469     505 ..     458     507 .. 0.86

  Alignments for each domain:
  == domain 1  score: 115.4 bits;  conditional E-value: 2.3e-36
   AAA_lid_9   1 seeetieiLrglkekyekhHgvkisdealeaavklSkrYisdrflPdkAIDllDeaaarvrlkkeskpeeleklekelaklekekealekeeekekaer 99 
                 s+e+ti+iLrglkekye hHgv+isd al+++++l++rY++ r+lPd+AIDl+Deaaa+vr+++es+pe l++le++l++l+ e +ale+e++++++er
  EPX71070.1 345 SIEDTISILRGLKEKYEVHHGVTISDRALVSSAHLASRYLTARRLPDSAIDLVDEAAAAVRVTRESQPEVLDNLERKLRQLRVEIRALEREKDEASRER 443
                 689***********************************************************************************************9 PP

   AAA_lid_9 100 lke 102
                 lk+
  EPX71070.1 444 LKA 446
                 986 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.24
   AAA_lid_9  65 eskpeeleklekelaklekekealekeeekekaerlk 101
                 +s+ ++l++++++l++l+ + + +e++++++ a++lk
  EPX71070.1 469 KSRGSDLQDAKRRLDELKAKAADAERRNDFTLAADLK 505
                 4566889**********************99998876 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.6   0.0   1.7e-17   6.9e-15       2     126 ..     206     338 ..     205     343 .. 0.78
   2 !   37.3   0.0   7.6e-12   3.2e-09       2     111 ..     617     735 ..     616     744 .. 0.85

  Alignments for each domain:
  == domain 1  score: 55.6 bits;  conditional E-value: 1.7e-17
                 EEESSTTSSHHHHHHHHHHHH..........THEEEEEETTTCS..SSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHH CS
         AAA   2 llyGppGtGKTllakavakel..........gvefleisgsell..skyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnq 88 
                 +l+G pG+GKT++a+ +a+ +          + ++l++++ +l+  sk+ ge e+++++++ke++ +++p ilf+DE++ l+++    + e +++++n 
  EPX71070.1 206 VLIGEPGVGKTSIAEGLARRIidsdvpanlaSCKLLSLDVGSLVagSKFRGEFEERVKAVLKEIEDSETPIILFVDEMHLLMGAG---SGEGSMDAANL 301
                 599*****************55544444444799*********99899****************999999***************...66667777777 PP

                 HHHHHHHTTTSSSTEEEEEEESS...GGGSTHHHHS.TTSSE CS
         AAA  89 Llteldgvkkkeskvivigatnr...pdkldpallr.gRfdr 126
                 L ++l + k       +igat+     + +++     +Rf++
  EPX71070.1 302 LKPMLARGKL-----HCIGATTLgeyKKYIEKDAAFeRRFQI 338
                 7777776655.....699999876633333333333355554 PP

  == domain 2  score: 37.3 bits;  conditional E-value: 7.6e-12
                 EEESSTTSSHHHHHHHHHHHH...THEEEEEETTTCSSS............STTHHHHHHHHHHHHHHHTSTS.EEEEEETGGGHHHHHTTCCCHHHHH CS
         AAA   2 llyGppGtGKTllakavakel...gvefleisgsellsk............yvgesekkirelfkeakekakp.silfiDEidalaksrsgseseeeer 84 
                 l++Gp GtGKTll ka+a  l   +  +++i++se ++k            yvg+ +    +l +++++   p s++++DE+++ a++           
  EPX71070.1 617 LFCGPSGTGKTLLTKALAGFLfddENAMIRIDMSEYMEKhsvsrligappgYVGHEAGG--QLTEQLRRR--PySVILFDEVEKAAPDV---------- 701
                 89******************97766889*********999****999999988877654..344444444..559**********9999.......... PP

                 HHHHHHHHHHHTTTS........SSTEEEEEEESS CS
         AAA  85 vvnqLlteldgvkkk........eskvivigatnr 111
                  + +Ll++ld+ +           ++ ++i+++n 
  EPX71070.1 702 -LTVLLQVLDEGRITsgqgqvvdAKNSVIIMTSNL 735
                 .**********999999999998555788888885 PP

>> ClpB_D2-small  C-terminal, D2-small domain, of ClpB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.1   0.2   4.7e-25     2e-22       1      81 []     784     866 ..     784     866 .. 0.94

  Alignments for each domain:
  == domain 1  score: 79.1 bits;  conditional E-value: 4.7e-25
                    SCHHHHHHHHHHHHHHHHHHSCT..TTEEEEEHHHHHHHHHHHTSBTTTBTCCHHHHHHHHTHHHHHHHHHTTSSSTTSEEEE CS
  ClpB_D2-small   1 LtkeelkkIvdlalkklekrlke..rgvelevtdealdalaekgydpeyGARpLrriiqreiedplaeeilsgelkegdtvrv 81 
                    L + ++++Iv++++ +++krl++  r +e++v++ea+d l ++gy+p+yGARpL+r+iq+++++p+a +il+g+l++++ ++v
     EPX71070.1 784 LRRTDIRSIVNNRVMEVQKRLQSnhRAIEIDVSEEAKDLLGSAGYSPAYGARPLNRVIQNQVLNPMAVLILNGQLRDKEVAHV 866
                    6789*****************776466*************************************************9988775 PP

>> Clp_N  Clp amino terminal domain, pathogenicity island component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.1   3.5e-07   0.00015       1      35 [.      17      51 ..      17      72 .. 0.78
   2 !   34.0   0.0   5.7e-11   2.4e-08       1      53 []      98     148 ..      98     148 .. 0.98

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 3.5e-07
                HHHHHHHTTCSSB-HHHHHHHHHHSCTSHHHHHHH CS
       Clp_N  1 AqelAkslghqyistEHLLlALleeddGlaarlLk 35
                A+ lA+s+gh+++st HL  +Ll+e d  +++lL+
  EPX71070.1 17 AYGLAQSYGHSQLSTVHLAAVLLSEADANGSSLLR 51
                7789********************98877777775 PP

  == domain 2  score: 34.0 bits;  conditional E-value: 5.7e-11
                 HHHHHHHTTCSSB-HHHHHHHHHHSCTSHHHHHHHHTTSSHHHHHHHHHHHHC CS
       Clp_N   1 AqelAkslghqyistEHLLlALleeddGlaarlLkkaGvdldalrkaiekllg 53 
                 A+el+k  +++yi  +H+  A++++d  ++++lL + Gv+++  + a+++++g
  EPX71070.1  98 AHELQKTQKDSYIAQDHFIAAFIKDD--IIKSLLTDVGVTPKSFEFAVNNVRG 148
                 99************************..**********************997 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   7.3e-05      0.03       3      23 ..     206     226 ..     204     243 .. 0.86
   2 !   38.7   0.0   2.1e-12   8.8e-10       2     122 ..     616     735 ..     615     748 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 7.3e-05
                 EEE--SSSSHHHHHHHGGGGB CS
       AAA_5   3 lLvGppGtgKselaerlaaal 23 
                 +L+G+pG+gK+++ae la+++
  EPX71070.1 206 VLIGEPGVGKTSIAEGLARRI 226
                 79****************998 PP

  == domain 2  score: 38.7 bits;  conditional E-value: 2.1e-12
                 EEEE--SSSSHHHHHHHGGGGB...S--EEEEE--TT--HHHHH--B--..........--------..G-SEEEEESGGG--HHHHHHHHHHHHSSEE CS
       AAA_5   2 vlLvGppGtgKselaerlaaal...nreveyvqltrdtteedlkgrreik.ngttslvdsplvraar..egeilvlDEveraesevlnsLlslleerrl 94 
                 +l  Gp+GtgK+ l++ la +l   ++ +  + +++++++  +   +    +       + l+++ r    +++++DEve+a ++vl +Ll++l+e r+
  EPX71070.1 616 FLFCGPSGTGKTLLTKALAGFLfddENAMIRIDMSEYMEKHSVSRLIGAPpGYVGHEAGGQLTEQLRrrPYSVILFDEVEKAAPDVLTVLLQVLDEGRI 714
                 6889*******************877777778999*****99999888764444444568999999988889*************************** PP

                 E..-SSSEEE---......-EEEEEESS CS
       AAA_5  95 lleeggelvkaknddllerfrviatanp 122
                    +g+++v  +++       +i+t+n 
  EPX71070.1 715 T--SGQGQVVDAKN-----SVIIMTSNL 735
                 *..77777766666.....688888885 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.1   2.3e-08   9.7e-06       2      59 ..     183     237 ..     182     311 .. 0.74
   2 ?    0.4   1.7       1.7   7.3e+02      76     135 ..     425     497 ..     392     533 .. 0.73
   3 !   13.3   0.0   0.00019     0.078       2      51 ..     585     640 ..     584     664 .. 0.79
   4 ?    1.3   0.1      0.94   3.9e+02     131     160 ..     682     710 ..     675     722 .. 0.76

  Alignments for each domain:
  == domain 1  score: 26.1 bits;  conditional E-value: 2.3e-08
      AAA_16   2 lvGReeeleqLlsalervrsgrpelvllsGesGvGKsslvrellralekdggiflrgk 59 
                 ++GRe+e+++  ++l+r    + ++ +l+Ge+GvGK+s+++ l+r++ ++++ +  + 
  EPX71070.1 183 VIGREDEIRRAIRVLSRR---TKNNPVLIGEPGVGKTSIAEGLARRIIDSDVPANLAS 237
                 78******5555555544...4466699****************99998864333333 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 1.7
      AAA_16  76 lareellrqlldeaesaeleawrekleeala...............avpelagaeasrllellkrllallsrder 135
                 l r   +r+l++e+++a++e+ +++ +ea+                 ++  + ++a+r l++lk+ +a ++r+ +
  EPX71070.1 425 L-R-VEIRALEREKDEASRERLKAARKEAADveeetrpirekyeleKSRGSDLQDAKRRLDELKAKAADAERRND 497
                 4.4.66788888877777777777777777777777776666655533444444447777777777777766544 PP

  == domain 3  score: 13.3 bits;  conditional E-value: 0.00019
      AAA_16   2 lvGReeeleqLlsale..rvrsgrp....elvllsGesGvGKsslvrellralekd 51 
                 ++G +e ++++++a++  r+  ++p     + l+ G+sG+GK+ l ++l+  l +d
  EPX71070.1 585 VIGQKEAVSAVANAIRlsRAGLSDPnqpiASFLFCGPSGTGKTLLTKALAGFLFDD 640
                 6788999999999999555555555888999***************9998766665 PP

  == domain 4  score: 1.3 bits;  conditional E-value: 0.94
      AAA_16 131 srderp.lvlvlDdlqwadeaslqllaaLlr 160
                 +r  rp  v+++D++++a ++ l++l + l+
  EPX71070.1 682 RR--RPySVILFDEVEKAAPDVLTVLLQVLD 710
                 43..4448***************99655555 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   4.7e-06     0.002       4     117 ..     201     307 ..     198     350 .. 0.72
   2 ?    1.1   0.1       1.1   4.5e+02      37     113 ..     330     420 ..     316     431 .. 0.61
   3 !   17.8   0.0   7.3e-06    0.0031       9     117 ..     617     710 ..     614     722 .. 0.81

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 4.7e-06
      AAA_22   4 tagilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvt.lpsstsskdllrellralglelkaerlsseellealeqalraravielliiDEaq 101
                 t++  v++Ge+G+GKT  ++ l+++              +  + ++++ s k l  ++ + +  ++ +  ++ ee ++a+ + +++  ++ +l +DE++
  EPX71070.1 201 TKNNPVLIGEPGVGKTSIAEGLARRI-------------IDSDvPANLASCKLLSLDVGSLVAGSKFR--GEFEERVKAVLKEIEDSETPIILFVDEMH 284
                 778889****************9996.............43330334447778888999999988888..9999999************9********* PP

      AAA_22 102 hlr.......seealeeLrslln 117
                  l+       s++a + L+ +l 
  EPX71070.1 285 LLMgagsgegSMDAANLLKPMLA 307
                 *9988865544999999977743 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 1.1
      AAA_22  37 e...erpevvfvtlpsstsskdllrellralglelka.....erlsseellealeqalrarav..ielliiDEaqh.lr....s.eealeeL.r 113
                     +r ++++v+ ps ++  ++lr l +++++ +       +  ss +l     ++l ar+    ++ ++DEa   +r    s +e+l +L r
  EPX71070.1 330 AafeRRFQIILVKEPSIEDTISILRGLKEKYEVHHGVtisdrALVSSAHL---ASRYLTARRLpdSAIDLVDEAAAaVRvtreSqPEVLDNLeR 420
                 13446777779999999999999999999999866665433322222222...23333333336568888999988666765425777777744 PP

  == domain 3  score: 17.8 bits;  conditional E-value: 7.3e-06
      AAA_22   9 vvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelkaerlsseellealeqalraravielliiDEaqhlrsee 107
                 + +G+sGtGKT+l + l+  l  +      +   +++++++ ++  ++     r +g +  +     +e   +l+++lr+r   ++++ DE+++   ++
  EPX71070.1 617 LFCGPSGTGKTLLTKALAGFLFDD------ENAMIRIDMSEYMEKHSV----SRLIGAPPGY---VGHEAGGQLTEQLRRRPY-SVILFDEVEKA-APD 700
                 78******************9532......555569999999966555....7777877778...8899999**********9.*********98.788 PP

      AAA_22 108 aleeLrslln 117
                 +l+ L + l+
  EPX71070.1 701 VLTVLLQVLD 710
                 8888776666 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.0    0.0059       2.4       2      50 ..     184     230 ..     183     287 .. 0.74
   2 !   29.2   0.0   1.6e-09   6.7e-07      22     142 ..     611     733 ..     585     748 .. 0.80

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0059
                      ---SHHHHHHHHHHHHHCTSSS-EEEECSTTSSHHHHHHHHHHHSTTTT CS
  Sigma54_activat   2 igesealkelleqikkvaktdlsvlitGesGtGKellaraiheaskrke 50 
                      ig++++++++++ +++ +k   + ++ Ge G+GK+ +a+ + ++   ++
       EPX71070.1 184 IGREDEIRRAIRVLSRRTK--NNPVLIGEPGVGKTSIAEGLARRIIDSD 230
                      6677777777777766543..344556***********98877655555 PP

  == domain 2  score: 29.2 bits;  conditional E-value: 1.6e-09
                      S..S-EEEECSTTSSHHHHHHHHHHHSTTTTS-EEEEETTTS-TTCHHHHHHEBSSSSSTTTSS-BE..HHHHHTTTSEEEEETGGGS-HHHHH CS
  Sigma54_activat  22 d..lsvlitGesGtGKellaraiheaskrkekpfvavncaaipeelleseLFGhekGaFtGAekekk..GlfekadgGtlfLDeigelplelQe 111
                      +  +s l  G sGtGK+ll +a+      +e+ +++++++++ e+   s+L G   G + G e+  +   ++++   +++++De+++  +++ +
       EPX71070.1 611 QpiASFLFCGPSGTGKTLLTKALAGFLFDDENAMIRIDMSEYMEKHSVSRLIGAPPG-YVGHEAGGQltEQLRRRPYSVILFDEVEKAAPDVLT 703
                      1457899***********************************************999.6666555443488999999***************** PP

                      HHHHHHHHSEEESBTSSSEEE--EEEEEEES CS
  Sigma54_activat 112 kLlrvlqegevervGsskeikvdvriiaatn 142
                       Ll+vl+eg+++  G+ + ++++  +i  t+
       EPX71070.1 704 VLLQVLDEGRITS-GQGQVVDAKNSVIIMTS 733
                      **********986.77777777777666665 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.0   9.3e-05     0.039      45      76 ..     200     231 ..     188     283 .. 0.86
   2 !   12.5   0.0   0.00021     0.089      49      71 ..     615     637 ..     609     663 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 9.3e-05
   IstB_IS21  45 ekkenivllGpsGvGKshlaialgveavragl 76 
                 ++k+n vl+G +GvGK+ +a  l+++ + +++
  EPX71070.1 200 RTKNNPVLIGEPGVGKTSIAEGLARRIIDSDV 231
                 568999******************99998776 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 0.00021
   IstB_IS21  49 nivllGpsGvGKshlaialgvea 71 
                 +++++GpsG+GK+ l+ al+   
  EPX71070.1 615 SFLFCGPSGTGKTLLTKALAGFL 637
                 6899***************8655 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   0.0    0.0028       1.2       5      46 ..     183     226 ..     179     255 .. 0.74
   2 !   14.2   0.1     5e-05     0.021      24      54 ..     615     644 ..     583     765 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0028
  Mg_chelatase   5 vkGqe.eakralei.aaaGgHnlllvGppGsGKtmlakrlpsll 46 
                   v+G+e e +ra+++ +   + n +l+G pG GKt +a+ l+  +
    EPX71070.1 183 VIGREdEIRRAIRVlSRRTKNNPVLIGEPGVGKTSIAEGLARRI 226
                   66655146788877245567889**************9987655 PP

  == domain 2  score: 14.2 bits;  conditional E-value: 5e-05
  Mg_chelatase  24 nlllvGppGsGKtmlakrlpsllpplseeea 54 
                   ++l++Gp+G+GKt+l k+l++ l + +++ +
    EPX71070.1 615 SFLFCGPSGTGKTLLTKALAGFLFDDENA-M 644
                   689******************99765443.2 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.0     0.006       2.5      32      60 ..     201     229 ..     189     310 .. 0.75
   2 !   17.4   0.0   5.7e-06    0.0024      35      82 ..     615     662 ..     610     665 .. 0.93

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.006
       AAA_7  32 nkkpvllvGptGtGKtviikdllkkldke 60 
                  k++ +l+G+ G+GKt+i++ l +++ ++
  EPX71070.1 201 TKNNPVLIGEPGVGKTSIAEGLARRIIDS 229
                 45667899***********9988776544 PP

  == domain 2  score: 17.4 bits;  conditional E-value: 5.7e-06
       AAA_7  35 pvllvGptGtGKtviikdllkkldkekylsltinfsaqtsanqlqdii 82 
                 ++l++Gp+GtGKt+++k l   l +++  ++ i +s +++ +++ ++i
  EPX71070.1 615 SFLFCGPSGTGKTLLTKALAGFLFDDENAMIRIDMSEYMEKHSVSRLI 662
                 689******************9999***************99999887 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   0.0   0.00033      0.14       3      41 ..     207     258 ..     206     278 .. 0.68
   2 ?    7.9   0.0      0.01       4.2       3      19 ..     618     634 ..     617     666 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 0.00033
      AAA_18   3 ltGtpGvGKttlakeLskrl.gf............gvnlrdvakenglllev 41 
                 l G pGvGKt++a+ L++r   +            +  ++++++ +  + e+
  EPX71070.1 207 LIGEPGVGKTSIAEGLARRIiDSdvpanlasckllSLDVGSLVAGSKFRGEF 258
                 8899**************9533355555555555655555555555555555 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.01
      AAA_18   3 ltGtpGvGKttlakeLs 19 
                  +G++G+GKt l+k+L+
  EPX71070.1 618 FCGPSGTGKTLLTKALA 634
                 79**************5 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.0      0.02       8.3       4      22 ..     207     225 ..     206     274 .. 0.91
   2 ?   -0.8   0.4       3.7   1.6e+03      90     123 ..     420     453 ..     346     465 .. 0.78
   3 !   12.3   0.0   0.00034      0.14       3      35 ..     617     654 ..     616     707 .. 0.79
   4 ?   -2.1   0.0       9.2   3.8e+03      85     109 ..     790     818 ..     719     819 .. 0.61

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.02
      AAA_33   4 lvGlpGsGKstlaerllkk 22 
                 l+G pG+GK+  ae+l+++
  EPX71070.1 207 LIGEPGVGKTSIAEGLARR 225
                 89**************975 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 3.7
      AAA_33  90 klarrlgvpvrivvvetdeetlkeRlakRaangd 123
                 + +r+l v++r++  e de+  ++  a+R+++ d
  EPX71070.1 420 RKLRQLRVEIRALEREKDEASRERLKAARKEAAD 453
                 4456777888888888888877777777777654 PP

  == domain 3  score: 12.3 bits;  conditional E-value: 0.00034
      AAA_33   3 llvGlpGsGKstlaerllkklg.....avllssdtlrr 35 
                 l++G++G+GK+ l + l+  l      +++++  ++++
  EPX71070.1 617 LFCGPSGTGKTLLTKALAGFLFddenaMIRIDMSEYME 654
                 89*************99755444455566666666555 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 9.2
      AAA_33  85 r....arflklarrlgvpvrivvvetdee 109
                 r     r++++ +rl +++r++ ++++ee
  EPX71070.1 790 RsivnNRVMEVQKRLQSNHRAIEIDVSEE 818
                 24444677777777777777777777776 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.065        27       4      23 ..     207     226 ..     205     269 .. 0.74
   2 !   13.3   0.0   0.00013     0.056      62     111 ..     685     734 ..     616     742 .. 0.64

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.065
       AAA_3   4 legvPGlaktllvkalakal 23 
                 l g PG++kt +++ la+ +
  EPX71070.1 207 LIGEPGVGKTSIAEGLARRI 226
                 6789*************864 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 0.00013
       AAA_3  62 fanllladeinrappktqsalleameerqvtvegethklpepflvlatqn 111
                   +++l de+++a+p + + ll++++e ++t ++ +    ++ +++ t n
  EPX71070.1 685 PYSVILFDEVEKAAPDVLTVLLQVLDEGRITSGQGQVVDAKNSVIIMTSN 734
                 4579***************************9877766666666777766 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.1     0.024        10       4      41 ..     186     223 ..     184     232 .. 0.85
   2 !    9.3   0.0    0.0022      0.94     102     208 ..     258     359 ..     243     370 .. 0.82
   3 ?    0.9   0.0      0.85   3.5e+02      27      52 ..     620     645 ..     608     713 .. 0.63

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.024
    ATPase_2   4 RekelkeleeilerepneiyfiYGpegsGKtaLlkeii 41 
                 Re e+++  ++l+r +++  ++ G  g+GKt++   ++
  EPX71070.1 186 REDEIRRAIRVLSRRTKNNPVLIGEPGVGKTSIAEGLA 223
                 9******9999999999999999********9876555 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.0022
    ATPase_2 102 vfkaielllekikkkgkkiiiiiDelqklidlglngaellvkeLlnliesltkekhlcvviclsSeglfiervyneselegrhkyilvddldketalnf 200
                  ++ ++++l++i+++ + ii+++De+  l   g+ +     ++Ll+ +      + + ++i ++  g   +++++ +  e r + ilv+    e +  +
  EPX71070.1 258 FEERVKAVLKEIEDSETPIILFVDEMHLLMGAGSGEGSMDAANLLKPMLA----RGKLHCIGATTLGEYKKYIEKDAAFERRFQIILVKEPSIEDTISI 352
                 578899************************77777655555555554444....7788999**********************9999998888888888 PP

    ATPase_2 201 lkegfkel 208
                 l+ + ke 
  EPX71070.1 353 LRGL-KEK 359
                 8776.444 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.85
    ATPase_2  27 GpegsGKtaLlkeiienledkdkyvi 52 
                 Gp g GKt L k ++  l d +   i
  EPX71070.1 620 GPSGTGKTLLTKALAGFLFDDENAMI 645
                 78888888777776665544333333 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0     0.074        31      15      34 ..     206     225 ..     197     232 .. 0.85
   2 ?   -1.1   0.3       6.1   2.5e+03      46      80 ..     436     477 ..     404     516 .. 0.53
   3 !   12.7   0.0   0.00034      0.14      16      51 ..     618     654 ..     612     767 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.074
                 EEEESTTSSHHHHHHHHTTS CS
                 xxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  15 aivGenGaGKStLlkllagl 34 
                 +++Ge G GK+++++ la+ 
  EPX71070.1 206 VLIGEPGVGKTSIAEGLARR 225
                 79***********9998876 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 6.1
                 TCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH.......H CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......x RF
    ABC_tran  46 gkdlkeqeleslrkeigvlpqepqlfpeltvren.......e 80 
                 +++ ++++l+ +rke + +++e++  +e+   e+       +
  EPX71070.1 436 KDEASRERLKAARKEAADVEEETRPIREKYELEKsrgsdlqD 477
                 222222344444444444444433333332222234433332 PP

  == domain 3  score: 12.7 bits;  conditional E-value: 0.00034
                 EEESTTSSHHHHHHHHTTSS--.SEEEEEETTCEGGG CS
                 xxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxx RF
    ABC_tran  16 ivGenGaGKStLlkllagllkp.teGeilldgkdlke 51 
                 + G++G+GK+ L k+lag l + ++  i++d+ +  e
  EPX71070.1 618 FCGPSGTGKTLLTKALAGFLFDdENAMIRIDMSEYME 654
                 78****************8765255667777555444 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   0.0    0.0039       1.6       3      24 ..     207     228 ..     206     239 .. 0.89
   2 !    9.5   0.0     0.003       1.3       2      20 ..     617     635 ..     616     657 .. 0.84

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.0039
  RNA_helicase   3 lyGpsgeGKStlakeLakallk 24 
                   l G++g+GK+++a+ La+++ +
    EPX71070.1 207 LIGEPGVGKTSIAEGLARRIID 228
                   78****************9985 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.003
  RNA_helicase   2 wlyGpsgeGKStlakeLak 20 
                   +++Gpsg+GK++l+k La 
    EPX71070.1 617 LFCGPSGTGKTLLTKALAG 635
                   69**************875 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   0.0    0.0037       1.5       3      22 ..     203     222 ..     201     247 .. 0.85
   2 !    9.1   0.0    0.0023      0.96       5      82 ..     616     702 ..     614     727 .. 0.73

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0037
      AAA_24   3 lkiliyGpsgiGKTtlakel 22 
                 ++ +++G++g+GKT++a  l
  EPX71070.1 203 NNPVLIGEPGVGKTSIAEGL 222
                 56699***********9887 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0023
      AAA_24   5 iliyGpsgiGKTtlakelgpkplfidtekGlksldadkfpdieswedfldevvel...........aaeladyktlviDtideleelcl 82 
                 +l  Gpsg+GKT l k l    +++d e+ + ++d  ++ + +s+  ++ +               +   ++y+++ +D ++++   +l
  EPX71070.1 616 FLFCGPSGTGKTLLTKAL-AG-FLFDDENAMIRIDMSEYMEKHSVSRLIGAPPGYvgheaggqlteQLRRRPYSVILFDEVEKAAPDVL 702
                 6778**************.55.5556677788888888876665555555444447777777777666777888888888888876665 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.0   0.3    0.0053       2.2      35      57 ..     204     226 ..     179     291 .. 0.62
   2 ?    6.2   0.0     0.019       7.8       9      54 ..     585     634 ..     579     657 .. 0.72
   3 ?   -1.3   0.0       3.9   1.6e+03      11      37 ..     841     867 ..     837     871 .. 0.89

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0053
      RuvB_N  35 hvllyGpPGlGkttlakiiakel 57 
                   +l+G PG+Gkt++a+ +a+ +
  EPX71070.1 204 NPVLIGEPGVGKTSIAEGLARRI 226
                 34688**********98776643 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.019
      RuvB_N   9 yigqekvkeklkifieaak....kreealdhvllyGpPGlGkttlakiia 54 
                  igq++  + ++ +i+ ++      ++++   l++Gp G Gkt l+k +a
  EPX71070.1 585 VIGQKEAVSAVANAIRLSRaglsDPNQPIASFLFCGPSGTGKTLLTKALA 634
                 67777766666555544441111567889999***********9998887 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 3.9
      RuvB_N  11 gqekvkeklkifieaakkreealdhvl 37 
                  q++v + ++++i   + r++++ hv+
  EPX71070.1 841 IQNQVLNPMAVLILNGQLRDKEVAHVI 867
                 6999999******************98 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.0    0.0092       3.8       3      22 ..     206     225 ..     204     236 .. 0.88
   2 ?   -1.7   1.0       7.5   3.1e+03      25      70 ..     405     447 ..     375     461 .. 0.55
   3 !    8.6   0.0    0.0049       2.1       3      20 ..     617     634 ..     615     662 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0092
      AAA_28   3 vitGgestGKTtlleaLaar 22 
                 v++G ++ GKT+++e La+r
  EPX71070.1 206 VLIGEPGVGKTSIAEGLARR 225
                 89****************98 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 7.5
      AAA_28  25 pvvpEaareileeklakgedalpwvedllafaervleeqleeeaaa 70 
                 +v +E+  e+l+++ +k ++ l+   ++ a++++  e+ +e+++aa
  EPX71070.1 405 RVTRESQPEVLDNLERKLRQ-LRV--EIRALEREKDEASRERLKAA 447
                 44455555555444444443.333..23333333333333333333 PP

  == domain 3  score: 8.6 bits;  conditional E-value: 0.0049
      AAA_28   3 vitGgestGKTtlleaLa 20 
                  + G+++tGKT l++aLa
  EPX71070.1 617 LFCGPSGTGKTLLTKALA 634
                 689**************9 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.0   0.00029      0.12      37     117 ..     206     286 ..     199     310 .. 0.79
   2 ?   -0.5   0.8       1.9     8e+02      65     103 ..     416     457 ..     389     500 .. 0.60
   3 ?    4.7   0.0     0.046        19      37      55 ..     617     635 ..     613     646 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00029
      AAA_25  37 llaGapgtGKttlaldlalava.tGkpwlg.pvapeqgkVlyvsaEds.edelrrRlravgealrddarllvldlagveslpLf 117
                 +l+G pg+GKt +a  la  +  ++ p    +++     V  ++a  + + e+++R++av+++++d ++  +l ++++   +L+
  EPX71070.1 206 VLIGEPGVGKTSIAEGLARRIIdSDVPANLaSCKLLSLDVGSLVAGSKfRGEFEERVKAVLKEIEDSETPIILFVDEM---HLL 286
                 699*******************98899877966666666655444444388*************99999999998654...443 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 1.9
      AAA_25  65 g..pvapeqgkVlyvsaEdsedel.rrRlravgealrddarl 103
                 +  +++ +q +V + ++E   de  r+Rl+a++++++d +++
  EPX71070.1 416 DnlERKLRQLRVEIRALEREKDEAsRERLKAARKEAADVEEE 457
                 255555577777777788776654158999999777443332 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.046
      AAA_25  37 llaGapgtGKttlaldlal 55 
                 l++G++gtGKt l+  la 
  EPX71070.1 617 LFCGPSGTGKTLLTKALAG 635
                 789**********998885 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   0.0     0.003       1.3       3      23 ..     206     226 ..     205     240 .. 0.83
   2 ?    6.5   0.0     0.023       9.6       3      38 ..     617     651 ..     615     661 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.003
                 EEESSTTSSHHHHHHCHCT-C CS
         Roc   3 vlvGdsgvGKtsllkrfvedk 23 
                 vl+G+ gvGKts+++ + ++ 
  EPX71070.1 206 VLIGEPGVGKTSIAEGLARRI 226
                 79***********99877655 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.023
                 EEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEE CS
         Roc   3 vlvGdsgvGKtsllkrfvedkfsekekstigvdflt 38 
                 +++G sg+GKt l k +    f+++ +++i +d+++
  EPX71070.1 617 LFCGPSGTGKTLLTKALAGFLFDDE-NAMIRIDMSE 651
                 689*************998888655.6788888765 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.0    0.0082       3.4      54      93 ..     206     245 ..     175     250 .. 0.74
   2 ?    0.8   0.1      0.53   2.2e+02     256     290 ..     252     286 ..     249     287 .. 0.87
   3 ?    5.7   0.1     0.018       7.3      24      72 ..     583     635 ..     564     655 .. 0.77

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0082
                 XXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXX CS
       TIP49  54 LlaGpsgtGktalaiaiskelg.edvpfvalsgsevyslev 93 
                 +l G++g Gkt++a ++++ +  +dvp + l++ ++ sl+v
  EPX71070.1 206 VLIGEPGVGKTSIAEGLARRIIdSDVP-ANLASCKLLSLDV 245
                 467***************998647777.4566667777665 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.53
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49 256 eklreeinkkvakyveegkaeivpGvlfiDevhml 290
                 +k r e ++ v+  ++e +    p +lf+De+h+l
  EPX71070.1 252 SKFRGEFEERVKAVLKEIEDSETPIILFVDEMHLL 286
                 5789999999999998888888999********98 PP

  == domain 3  score: 5.7 bits;  conditional E-value: 0.018
                 XXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  24 eglvGqkkareaagvivelikek....klaGravLlaGpsgtGktalaiaisk 72 
                 + ++Gqk+a  a++  ++l +++    +    + L+ GpsgtGkt l  a++ 
  EPX71070.1 583 KQVIGQKEAVSAVANAIRLSRAGlsdpNQPIASFLFCGPSGTGKTLLTKALAG 635
                 57899*9999999999999886522223333489***********99988875 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.0     0.012       4.8      95     120 ..     198     223 ..     162     236 .. 0.77
   2 ?    6.6   0.0     0.016       6.5     102     121 ..     616     635 ..     595     657 .. 0.87

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.012
                  HHCTTSEEEEECSTTSSHHHHHHHHC CS
  RsgA_GTPase  95 ellkdktsvlvGqSGvGKStLinall 120
                  ++ +++  vl+G+ GvGK+++ + l+
   EPX71070.1 198 SRRTKNNPVLIGEPGVGKTSIAEGLA 223
                  334456679***********998776 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.016
                  EEEECSTTSSHHHHHHHHCT CS
  RsgA_GTPase 102 svlvGqSGvGKStLinallp 121
                   +++G+SG GK+ L +al++
   EPX71070.1 616 FLFCGPSGTGKTLLTKALAG 635
                  589************99987 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0      0.31   1.3e+02      50      78 ..       6      73 ..       3     131 .. 0.66
   2 ?    7.0   0.0     0.017       7.1       9      38 ..     201     230 ..     191     244 .. 0.77
   3 ?    2.2   0.0       0.5   2.1e+02      14      33 ..     617     636 ..     610     649 .. 0.78

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.31
      AAA_19 50 ftgrAakelrerlaalgae.....atTiHrlal...................................l 78
                ft +Aak l+++  +l ++      +T+H  a+                                   +
  EPX71070.1  6 FTDKAAKTLSDAY-GLAQSyghsqLSTVHLAAVllseadangssllrtivekaggdgqkfersvtsrlV 73
                9**********99.655557888999***7766666666555555555555555555555555555550 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.017
      AAA_19   9 kekvllvtaGpGtGKTrvlkhivallvelg 38 
                 ++++ ++++ pG GKT + ++  + +++  
  EPX71070.1 201 TKNNPVLIGEPGVGKTSIAEGLARRIIDSD 230
                 4566789**********9998888777655 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.5
      AAA_19  14 lvtaGpGtGKTrvlkhival 33 
                 l  ++ GtGKT ++k+    
  EPX71070.1 617 LFCGPSGTGKTLLTKALAGF 636
                 567888*****999877655 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.0     0.011       4.4       5      43 ..     188     226 ..     184     234 .. 0.80
   2 ?    6.4   0.0     0.021       8.7      21      41 ..     611     635 ..     586     644 .. 0.70

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.011
                 HHHHHHHHHHHHCHTEEEEEEESTTSSHHHHHHHHHHHT CS
        TsaE   5 eetealgkklakalgdvilLeGdLGaGKTtlvrglakal 43 
                 +e++++ + l + +++  +L G+ G+GKT ++ gla+ +
  EPX71070.1 188 DEIRRAIRVLSRRTKNNPVLIGEPGVGKTSIAEGLARRI 226
                 5666667777776677899*****************986 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.021
                 E....EEEEESTTSSHHHHHHHHHH CS
        TsaE  21 v....ilLeGdLGaGKTtlvrglak 41 
                      +l+ G+ G+GKT l+++la 
  EPX71070.1 611 QpiasFLFCGPSGTGKTLLTKALAG 635
                 034448999************9985 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.3       4.5   1.9e+03      25      90 ..     402     464 ..     353     503 .. 0.54
   2 !   13.3   0.0   7.4e-05     0.031     129     204 ..     613     689 ..     573     698 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 4.5
       T2SSE  25 vkvrervdgielreveelekaalerlisriaalakldiseerplqdarlpekgvrlrvvllPvvag 90 
                 + v  rv + ++ ev +  +++l++l  +i al +++ + +r  + a+ + ++++++  + P+ ++
  EPX71070.1 402 AAV--RVTRESQPEVLDNLERKLRQLRVEIRALEREKDEASRERLKAARK-EAADVEEETRPIREK 464
                 222..222222344444445555555555555555555555555555555.555555555555555 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 7.4e-05
       T2SSE 129 rglilvsGgTgsGKttllyallkeinksderivtvEDpvEiqleganqvqlnak..kakvtfadllraaLRlrPDrim 204
                   ++l+ G+ g+GKt l+ al  ++ ++ e+ ++  D  E+  ++     + a    ++ ++   l + LR+rP  ++
  EPX71070.1 613 IASFLFCGPSGTGKTLLTKALAGFLFDD-ENAMIRIDMSEYMEKHSVSRLIGAPpgYVGHEAGGQLTEQLRRRPYSVI 689
                 5789**********************99.5555555999998777655544444667888888889999999996555 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.0     0.025        10       8      40 ..     192     224 ..     187     248 .. 0.80
   2 ?    5.8   0.0     0.025        10      24     112 ..     619     709 ..     613     716 .. 0.68

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.025
      AAA_30   8 aavealltsgdrvavltGpAGtGKttalkalre 40 
                 +a++ l   ++   vl G +G GKt + ++l++
  EPX71070.1 192 RAIRVLSRRTKNNPVLIGEPGVGKTSIAEGLAR 224
                 566666666667789************999954 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.025
      AAA_30  24 tGpAGtGKttalkalreaweaaggrviglAptgkaAkv.Laeelgi.eastiakllkrlkgrarlepgtllivDEagmvdtkqlaallkaa 112
                  Gp GtGKt + kal+  + +++  +i +  ++ + k  +++ +g+ +++  ++   +l+++ r +p ++++ DE+  ++ + l+ ll+ +
  EPX71070.1 619 CGPSGTGKTLLTKALAGFLFDDENAMIRIDMSEYMEKHsVSRLIGApPGYVGHEAGGQLTEQLRRRPYSVILFDEVEKAAPDVLTVLLQVL 709
                 69*************9888777655555555554444446666666556666666666666666666677777777777766666666655 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.0    0.0022      0.92       4      31 ..     206     233 ..     205     275 .. 0.88
   2 ?    2.0   0.0      0.42   1.7e+02       6      21 ..     619     634 ..     615     643 .. 0.86

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0022
                 EEEC-TTTCHHHHHHHHHHHHCTS-SCC CS
       NACHT   4 ilqGeaGsGKTtLlqklalawaegklpq 31 
                 +l Ge+G+GKT  +++la+ + +++ p+
  EPX71070.1 206 VLIGEPGVGKTSIAEGLARRIIDSDVPA 233
                 689***************9998888776 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.42
                 EC-TTTCHHHHHHHHH CS
       NACHT   6 qGeaGsGKTtLlqkla 21 
                  G++G GKT L + la
  EPX71070.1 619 CGPSGTGKTLLTKALA 634
                 69*********99887 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.89   3.7e+02       3      41 ..     206     223 ..     206     275 .. 0.76
   2 ?   -1.8   0.1       5.1   2.1e+03      94      94 ..     471     471 ..     378     547 .. 0.57
   3 ?    7.1   0.0    0.0099       4.1       3      24 ..     617     638 ..     615     660 .. 0.81
   4 ?    1.1   0.0      0.67   2.8e+02     252     288 ..     681     717 ..     676     733 .. 0.69

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.89
      AAA_21   3 vliGpNgsGKSnLLdaldllarldrdvegltdelsgggg 41 
                 vliG  g+GK+++ + l                      
  EPX71070.1 206 VLIGEPGVGKTSIAEGL---------------------A 223
                 89***********9999.....................2 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 5.1
      AAA_21  94 l 94 
                 +
  EPX71070.1 471 R 471
                 1 PP

  == domain 3  score: 7.1 bits;  conditional E-value: 0.0099
      AAA_21   3 vliGpNgsGKSnLLdaldllar 24 
                 ++ Gp g+GK+ L +al ++ +
  EPX71070.1 617 LFCGPSGTGKTLLTKALAGFLF 638
                 689**************98864 PP

  == domain 4  score: 1.1 bits;  conditional E-value: 0.67
      AAA_21 252 lralkkgsllliDEpEngLHPkllrrllellkelsr..n 288
                 lr+++  s++l+DE+E    P +l+ ll++l+e +   +
  EPX71070.1 681 LRRRPY-SVILFDEVEKA-APDVLTVLLQVLDEGRItsG 717
                 666766.*********87.77777777777755555442 PP

>> Torsin  Torsin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00039      0.16      14      80 ..     572     640 ..     565     654 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00039
                 --HHHHHHHHHHH--S-HHHHHHHHHHHH.HHHT-SS-SS-EE.EEEEE-TTSSHHHHHHHHHHHHSTT CS
      Torsin  14 anleeLekdlekklfGqhlvkklvvksvk.aylenekpkkpLv.lsfhGwtGtGknfvaeiiaenlyrd 80 
                  +l ++e+ l k+++Gq  + + v ++++ +     +p++p++ + f G +GtGk  +++ +a  l+ d
  EPX71070.1 572 ERLLKMERVLGKQVIGQKEAVSAVANAIRlSRAGLSDPNQPIAsFLFCGPSGTGKTLLTKALAGFLFDD 640
                 567789999*******************94455567999998736789**************9998875 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.039        16       6      40 ..     192     226 ..     187     235 .. 0.75
   2 ?   -2.5   0.2       6.1   2.5e+03     113     153 ..     352     388 ..     329     439 .. 0.50
   3 ?   -2.4   0.3       5.7   2.4e+03     107     156 ..     412     463 ..     407     483 .. 0.58
   4 ?    5.2   0.0     0.027        11      14      58 ..     610     656 ..     600     683 .. 0.81

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.039
  Zeta_toxin   6 kdkkypsqerPklillgGqpGAGKselaellkdel 40 
                 +++++ s++++   +l G pG GK+++ae l++++
  EPX71070.1 192 RAIRVLSRRTKNNPVLIGEPGVGKTSIAEGLARRI 226
                 55555566666667788************999876 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 6.1
  Zeta_toxin 113 laealkkaGYevevvv.vavkkelSrlgvldRyeeevaegRl 153
                 + + lk+  Yev+  v +  +  +S   +++Ry++     R 
  EPX71070.1 352 ILRGLKE-KYEVHHGVtISDRALVSSAHLASRYLTA----RR 388
                 6666666.4666543313344455666677777666....22 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 5.7
  Zeta_toxin 107 pdvvkklaealkkaGYevevvvvavkk.elSrlgvld.Ryeee.vae.gRlvpk 156
                 p+v+++l ++l++   +ve++++  +k e Sr+++++ R e+  v+e  R + +
  EPX71070.1 412 PEVLDNLERKLRQ--LRVEIRALEREKdEASRERLKAaRKEAAdVEEeTRPIRE 463
                 6666666666666..667777776655134444443213333344443355555 PP

  == domain 4  score: 5.2 bits;  conditional E-value: 0.027
  Zeta_toxin  14 erPklill.gGqpGAGKselaellkdele.rqgnvvrldpDdlRelh 58 
                 ++P++ +l  G +G GK+ l ++l+  l   ++ ++r+d  ++ e h
  EPX71070.1 610 NQPIASFLfCGPSGTGKTLLTKALAGFLFdDENAMIRIDMSEYMEKH 656
                 7788766548999*************9996777799***99998888 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0      0.27   1.1e+02      14      42 ..     195     225 ..     183     273 .. 0.81
   2 ?    8.0   0.0    0.0041       1.7      24      41 ..     618     635 ..     610     650 .. 0.82

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.27
                 HHHH..H-SEEEEE--TTSSTTHHHHHHHHH CS
        PhoH  14 ealk..kndivfaiGpaGtGKtylavalave 42 
                 ++l+  +++  + iG+ G GKt +a  la +
  EPX71070.1 195 RVLSrrTKNNPVLIGEPGVGKTSIAEGLARR 225
                 55554455566889**********9877765 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0041
                 EE--TTSSTTHHHHHHHH CS
        PhoH  24 aiGpaGtGKtylavalav 41 
                   Gp+GtGKt+l+ ala 
  EPX71070.1 618 FCGPSGTGKTLLTKALAG 635
                 57***********99985 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0      0.12        52      21      39 ..     201     219 ..     193     237 .. 0.80
   2 ?    5.8   0.0     0.027        11      24      43 ..     615     634 ..     607     643 .. 0.80
   3 ?   -2.1   0.0       8.1   3.4e+03      29      47 ..     712     730 ..     707     735 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.12
      AAA_29  21 lkgatlltGpsGsGKSTll 39 
                 +k++ +l+G+ G+GK+++ 
  EPX71070.1 201 TKNNPVLIGEPGVGKTSIA 219
                 455789**********985 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.027
      AAA_29  24 atlltGpsGsGKSTllDAiq 43 
                 ++l+ GpsG+GK+ l  A++
  EPX71070.1 615 SFLFCGPSGTGKTLLTKALA 634
                 489*********98876665 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 8.1
      AAA_29  29 GpsGsGKSTllDAiqalLv 47 
                 G++ sG   ++DA + +++
  EPX71070.1 712 GRITSGQGQVVDAKNSVII 730
                 889999999****988865 PP

>> DUF5368  Family of unknown function (DUF5368)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   0.00027      0.11      40     100 ..     570     627 ..     553     638 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00027
     DUF5368  40 irerklsskrlvraelvglvGgvlalllvaavtqsglsDiggpvDlllllliaaaglvgst 100
                  +er l+++r +  +++g   +v a++  ++++++glsD   p+  +l+ +  ++g    t
  EPX71070.1 570 EKERLLKMERVLGKQVIGQKEAVSAVANAIRLSRAGLSDPNQPIASFLFCGPSGTG---KT 627
                 699********************************************998877665...34 PP

>> CbiA  CobQ/CobB/MinD/ParA nucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0      0.14        58       9      34 ..     212     228 ..     206     601 .. 0.78
   2 ?    5.0   0.1     0.059        24       7      35 ..     621     649 ..     617     822 .. 0.81

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.14
                 TSSHHHHHHHHHHHHHHTT--EEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx RF
        CbiA   9 GvGKTtlaanLaralarrglrVllvD 34 
                 GvGKT++a +Lar           +D
  EPX71070.1 212 GVGKTSIAEGLARR---------IID 228
                 99****99999982.........444 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.059
                 STTSSHHHHHHHHHHHHHHTT--EEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        CbiA   7 kGGvGKTtlaanLaralarrglrVllvDa 35 
                  +G+GKT l+ +La  l ++++  + +D+
  EPX71070.1 621 PSGTGKTLLTKALAGFLFDDENAMIRIDM 649
                 59************999887777776665 PP

>> YlqD  YlqD protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   2.8     0.001      0.44      11      71 ..     404     471 ..     395     496 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.001
        YlqD  11 aivTeklKeelqqqlqaqieqldkelqqLefqakrlikeikkqsaq.......qieeiqeqvekekse 71 
                 ++vT +++ e++++l+++++ql  e++ Le ++ ++ +e  k   +       + + i+e++e eks+
  EPX71070.1 404 VRVTRESQPEVLDNLERKLRQLRVEIRALEREKDEASRERLKAARKeaadveeETRPIREKYELEKSR 471
                 78*********************************999998877774555555555555555555543 PP

>> Nup54  Nucleoporin complex subunit 54
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   5.9    0.0015      0.62      39     124 ..     409     490 ..     403     503 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.0015
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SS---SSHHHHHHHHHHHHHHHS CS
       Nup54  39 kaQqkevaqhrerlkeisdrleeleqkhqletsvrlekakkrhvelshRllrllrkleilrsrgyaldaeEeelrarletleaqln 124
                 + Q + +++++ +l +++ ++++le++++    +rl+ a+k+ +  ++ +  +  k e+ +srg+ l+     +++rl++l+a+  
  EPX71070.1 409 ESQPEVLDNLERKLRQLRVEIRALEREKDEASRERLKAARKEAADVEEETRPIREKYELEKSRGSDLQ----DAKRRLDELKAKAA 490
                 5799999***********************************************************99....44555555555544 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6  10.3    0.0031       1.3      50     127 ..     409     490 ..     384     495 .. 0.70

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.0031
      APG6_N  50 eeleeeleklekeeeelleeLkelekereeleaelaaleeelealeeeeerfwreyne.lql...elleleeeldsleaqye 127
                 e+  e l++le++ ++l  e+++le+e++e  +e+ +++++++a  eee+r +re  e  +    +l++ + +ld l+a+ +
  EPX71070.1 409 ESQPEVLDNLERKLRQLRVEIRALEREKDEASRERLKAARKEAADVEEETRPIREKYElEKSrgsDLQDAKRRLDELKAKAA 490
                 334444999*******************999888777777777777777777776655245411145555555566666555 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0      0.63   2.6e+02      23      39 ..     206     222 ..     201     229 .. 0.90
   2 ?   10.7   0.0    0.0013      0.55      22      63 ..     616     658 ..     608     734 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.63
      AAA_23  23 lItGpNGaGKTTildAi 39 
                 +++G+ G GKT+i + +
  EPX71070.1 206 VLIGEPGVGKTSIAEGL 222
                 67899********9987 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.0013
      AAA_23  22 tlItGpNGaGKTTildAiklaLygetprlsrks.grgfeksdv 63 
                 +l++Gp G+GKT +  A+   L+ + + + r + ++ +ek++v
  EPX71070.1 616 FLFCGPSGTGKTLLTKALAGFLFDDENAMIRIDmSEYMEKHSV 658
                 89*********************98766655554445556555 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4  11.0    0.0029       1.2     129     236 ..     409     533 ..     392     541 .. 0.63

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0029
     DUF4407 129 aa.......ltaelaeleaqiaalqaeidaaear.ldalraeaqkeldgtk..gtgttgvaGkgpaakekkaqldaaqaelaelkakld.......ata 210
                 ++       l+ +l++l+ +i+al++e d+a+++ l+a+r+ea++  + t+   ++ +  + +g   + +k+ ld+++a+ a+++++ d       +  
  EPX71070.1 409 ESqpevldnLERKLRQLRVEIRALEREKDEASRErLKAARKEAADVEEETRpiREKYELEKSRGSDLQDAKRRLDELKAKAADAERRNDftlaadlKYY 507
                 222444444888999999999999999988876514555555555444444664444555566666666666666666666666666559998888667 PP

     DUF4407 211 rlaalraelaeleaerakeraasqaa 236
                  +++l+++++ le++++++ a+  a 
  EPX71070.1 508 GIPDLQKRIEFLEQQKRAADADAMAN 533
                 77777777777777777777766654 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   9.6    0.0062       2.6     156     254 ..     402     493 ..     391     529 .. 0.57

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0062
        Spc7 156 elLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeae 254
                 + +   +e   e+l++le++  +l+ e++ l+++++e     +e+L+++r+e a++++e +  +++++  +++  +l+++   l    +el+++ a ae
  EPX71070.1 402 AAVRVTRESQPEVLDNLERKLRQLRVEIRALEREKDE---ASRERLKAARKEAADVEEETRPIREKYELEKSRGSDLQDAKRRL----DELKAKAADAE 493
                 5555556666677777777777777777777776555...56777888888777777777654444444443333333333333....33333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (902 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1150  (0.0641419); expected 358.6 (0.02)
Passed bias filter:                      643  (0.0358637); expected 358.6 (0.02)
Passed Vit filter:                       117  (0.00652574); expected 17.9 (0.001)
Passed Fwd filter:                        44  (0.00245412); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              43  [number of targets reported over threshold]
# CPU time: 0.93u 0.32s 00:00:01.25 Elapsed: 00:00:00.47
# Mc/sec: 5785.52
//
Query:       EPX71071.1  [L=261]
Description: PCNA protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.9e-60  200.8   4.3    8.1e-60  200.1   3.5    1.7  2  PCNA_N    Proliferating cell nuclear antigen, N-terminal doma
    7.6e-54  181.3   0.0    1.6e-53  180.3   0.0    1.5  2  PCNA_C    Proliferating cell nuclear antigen, C-terminal doma
    3.4e-07   29.6   0.4    4.2e-05   22.8   0.4    2.1  1  Rad1      Repair protein Rad1/Rec1/Rad17
    1.1e-05   25.0   0.1    1.3e-05   24.7   0.1    1.1  1  Rad9      Rad9
    0.00094   18.4   0.1     0.0021   17.2   0.1    1.8  1  Hus1      Hus1-like protein


Domain annotation for each model (and alignments):
>> PCNA_N  Proliferating cell nuclear antigen, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  200.1   3.5   2.2e-63   8.1e-60       1     126 [.       1     124 [.       1     125 [. 0.98
   2 ?   -2.3   0.0      0.97   3.5e+03      65      90 ..     202     227 ..     197     236 .. 0.78

  Alignments for each domain:
  == domain 1  score: 200.1 bits;  conditional E-value: 2.2e-63
                 CEEEEESSHHHHHHHHHHHTTTCSEEEEEEETTEEEEEEE-TTSSEEEEEEEEGGGSSEEEESS-EEEEEEHHHHHHHHTTSTTTSEEEEEEETTSSEE CS
      PCNA_N   1 mlearleqasllkklleaikdlvneanfdcddsGislqalDsshvaLvslelrsegfekyrCDrnlalgvnlnslskilkcannedsvtlkaedeadtl 99 
                 mlearl+qa+llkkll+aik+lv++anfdc+d+Gislqa+DsshvaLvs+ ++s+gfe yrCDrn+alg+nln+lsk+l+ca+ned vtlkaed+++tl
  EPX71071.1   1 MLEARLQQAALLKKLLDAIKELVTDANFDCNDNGISLQAMDSSHVALVSMLIKSDGFEPYRCDRNIALGINLNALSKVLRCAQNEDLVTLKAEDTPETL 99 
                 9************************************************************************************************** PP

                 EEEEEECTSSEEEEEEEEEEEBGCEEC CS
      PCNA_N 100 alvfesekkdkiaeydlklklidldse 126
                 ++vfesek+d+i++y +kl++id+  e
  EPX71071.1 100 NMVFESEKNDRISDYAVKLMDIDQ--E 124
                 *************99999999997..3 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.97
                 -EEEEEEHHHHHHHHTTSTTTSEEEE CS
      PCNA_N  65 nlalgvnlnslskilkcannedsvtl 90 
                  ++lg +l+ l++  k +   + vtl
  EPX71071.1 202 AVSLGFSLKYLAQFTKATPLANRVTL 227
                 68899999999999888877777766 PP

>> PCNA_C  Proliferating cell nuclear antigen, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       2.1   7.4e+03      56      75 ..      75      94 ..      48     103 .. 0.66
   2 !  180.3   0.0   4.4e-57   1.6e-53       1     127 [.     127     253 ..     127     254 .. 0.98

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 2.1
                E--BEESSSGGGCBEEEESS CS
      PCNA_C 56 lkqvkdvdkeeeavklelke 75
                l++v   +++e+ v+l++++
  EPX71071.1 75 LSKVLRCAQNEDLVTLKAED 94
                44455556666666666654 PP

  == domain 2  score: 180.3 bits;  conditional E-value: 4.4e-57
                 ----SS-SEEEEEEHHHHHHHHHHHTTT-SEEEEEEETTEEEEEEEETTEEEEEEE--BEESSSGGGCBEEEESS-EEEEEEHHHHHHHGGGGGC-SEE CS
      PCNA_C   1 gipdseydavvklpssefaricrdlsqlsdsvvisvtkegvkfsasGdiGsasivlkqvkdvdkeeeavklelkepvtltfalkYlaeftkatsLserv 99 
                 gipd+eyda+v++p++ef+ri+rdl +lsdsv i ++kegv+fs++GdiG++s++lkq++d+++++++++++l+++v+l f+lkYla+ftkat+L++rv
  EPX71071.1 127 GIPDIEYDATVTMPAAEFQRIIRDLLTLSDSVRIHASKEGVRFSCKGDIGAGSTTLKQHTDLADNDQSIEVSLTQAVSLGFSLKYLAQFTKATPLANRV 225
                 8************************************************************************************************** PP

                 EEEEETTSEEEEEEEETTCEEEEEEE-B CS
      PCNA_C 100 tlslssevPlvveykikdvgllayllak 127
                 tl +ssevPl+vey++++++l++yl++k
  EPX71071.1 226 TLCMSSEVPLLVEYQMESGYLRFYLAPK 253
                 *****************99988888876 PP

>> Rad1  Repair protein Rad1/Rec1/Rad17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.4   1.2e-08   4.2e-05       2     264 ..       2     230 ..       1     236 [. 0.84

  Alignments for each domain:
  == domain 1  score: 22.8 bits;  conditional E-value: 1.2e-08
        Rad1   2 fsAtlsnvseLatlLksia.fkdkalvqissdGlkfiv.ednrvlqaqafldkalFtsYtfenaqddedeedeeedsvsfevsLsallecLnifgknds 98 
                 ++A+l+++  L +lL++i  ++++a  +  ++G+++ + + ++v   +++++++ F+ Y+              +  + + ++L+al + L   +++d 
  EPX71071.1   2 LEARLQQAALLKKLLDAIKeLVTDANFDCNDNGISLQAmDSSHVALVSMLIKSDGFEPYRC-------------DRNIALGINLNALSKVLRCAQNEDL 87 
                 7899**************736779************762677888899999**********.............6789**************9999887 PP

        Rad1  99 sskessssraskvasssakatscklsYkgeGsPLvliLee..agvtttcelsTyepe.edldleldrqevvlkvilkselLhsalteLdatskklkila 194
                                       ++l+ +++ + L++++e   ++     +++ ++++ e l     + e  ++v + ++ ++ ++++L   s++++i a
  EPX71071.1  88 ----------------------VTLKAEDTPETLNMVFESekNDRISDYAVKLMDIDqEHL--GIPDIEYDATVTMPAAEFQRIIRDLLTLSDSVRIHA 162
                 ......................788999999999999999666666777777777774444..44567888999************************* PP

        Rad1 195 ssekkapvfalsakgelgssevefpneksvlekfevs..slsessessYkfallkkaakalalssKvslrmd 264
                 s+e      ++s kg++g  +  + +  ++ ++ +    sl ++++  + +++l++ +ka+ l++ v l m 
  EPX71071.1 163 SKE----GVRFSCKGDIGAGSTTLKQHTDLADNDQSIevSLTQAVSLGFSLKYLAQFTKATPLANRVTLCMS 230
                 **7....79*********999999888886554443332256777777*******************99886 PP

>> Rad9  Rad9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.1   3.7e-09   1.3e-05       3     207 ..      14     213 ..      12     242 .. 0.85

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 3.7e-09
        Rad9   3 ralqclsrigdelyleisedglelrtvnssrSayalvtlkksfFdkyekevseqirckilvKsvlsvfrslsakektvekvkisidekksrlivqllC. 100
                 ++l ++  +  + +++ +++g++l++++ss+ a +++++k++ F+ y  + + +i + i++ ++ +v+r+++    + + v+++ ++    l + +   
  EPX71071.1  14 KLLDAIKELVTDANFDCNDNGISLQAMDSSHVALVSMLIKSDGFEPY--RCDRNIALGINLNALSKVLRCAQ----NEDLVTLKAEDTPETLNMVFESe 106
                 666666677778899********************************..99******************988....66788999999999999999874 PP

        Rad9 101 khgvkkthkisledseslkavfdkettpsklriksrvLsdllehfsssleeitielakervllksyeeeekdnkkalstelsideeeFeqyqlaedvei 199
                 k++ +  + ++l d ++ ++ +       ++++++  ++ ++  +    + + i+++ke v ++   + +++++   + +   d+++  +++l++ v++
  EPX71071.1 107 KNDRISDYAVKLMDIDQEHLGIPDIEYDATVTMPAAEFQRIIRDLLTLSDSVRIHASKEGVRFSCKGDIGAGSTTLKQHTDLADNDQSIEVSLTQAVSL 205
                 678999**************999999999****************************999999888888888864444444457788889999999999 PP

        Rad9 200 tlslkefk 207
                  +slk + 
  EPX71071.1 206 GFSLKYLA 213
                 99999765 PP

>> Hus1  Hus1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.1   5.8e-07    0.0021       4     184 ..       3     166 ..       1     251 [. 0.85

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 5.8e-07
        Hus1   4 kaqltdaetlkkvlqslsklgkecilrltpeklrfiiiteaddgvqvwaqlqvdaiFeeyeieSndeneInlevdlaaLlraLksaeaaksvqlrLtkk 102
                  a+l++a++lkk+l ++++l  +     +++ + ++ +  +++ v ++  l +++ Fe y+++     +I+l ++l+aL ++L+ a++   v+l+   +
  EPX71071.1   3 EARLQQAALLKKLLDAIKELVTDANFDCNDNGISLQAM--DSSHVALVSMLIKSDGFEPYRCD----RNIALGINLNALSKVLRCAQNEDLVTLKAEDT 95 
                 588999********************************..89********************7....469******************99999886666 PP

        Hus1 103 grvplLaleisglssreretvvthdiPvkvlseseveelkePelrdpdvsilLPdllqLkklvdkfkklssdlltlsankdG 184
                  +    +l +   s    +++ + d  vk+++ ++ e l  P + ++d ++ +P+  + + ++  +  l sd++ + a+k+G
  EPX71071.1  96 PE----TLNMVFESE---KNDRISDYAVKLMDIDQ-EHLGIPDI-EYDATVTMPA-AEFQRIIRDLLTL-SDSVRIHASKEG 166
                 33....333333333...33446678888885555.68888888.7888888886.4667777777777.888888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       581  (0.0324056); expected 358.6 (0.02)
Passed bias filter:                      487  (0.0271627); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.47u 0.29s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 1792.41
//
Query:       EPX71072.1  [L=386]
Description: tRNA specific adenosine deaminase subunit Tad2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.2e-26   90.5   0.5    8.6e-26   89.8   0.5    1.3  1  dCMP_cyt_deam_1  Cytidine and deoxycytidylate deaminase zinc-
    8.7e-21   74.1   0.0    1.7e-20   73.1   0.0    1.4  1  MafB19-deam      MafB19-like deaminase
    9.3e-05   22.5   0.0     0.0002   21.5   0.0    1.5  1  SNAD4            Secreted Novel AID/APOBEC-like Deaminase 4
     0.0061   16.3   0.0      0.014   15.1   0.0    1.7  2  PRK              Phosphoribulokinase / Uridine kinase family
     0.0063   16.6   0.1      0.014   15.5   0.1    1.5  1  APOBEC3          APOBEC3
     0.0092   16.1   0.1      0.017   15.3   0.1    1.4  1  NAD1             Novel AID APOBEC clade 1
  ------ inclusion threshold ------
      0.012   15.6   0.1      0.023   14.7   0.1    1.4  1  APOBEC2          APOBEC2
      0.016   15.3   0.0      0.029   14.4   0.0    1.4  1  Bd3614-deam      Bd3614-like deaminase
       0.03   14.2   0.1      0.067   13.1   0.1    1.5  1  APOBEC4_like     APOBEC4-like -AID/APOBEC-deaminase
      0.031   14.2   0.1      0.054   13.4   0.1    1.3  1  APOBEC_N         APOBEC-like N-terminal domain
      0.033   14.0   0.0        1.7    8.5   0.1    2.4  2  Inv-AAD          Invertebrate-AID/APOBEC-deaminase
       0.19   11.8   0.0       0.35   11.0   0.0    1.4  1  NAD2             Novel AID APOBEC clade 2


Domain annotation for each model (and alignments):
>> dCMP_cyt_deam_1  Cytidine and deoxycytidylate deaminase zinc-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.8   0.5   5.8e-29   8.6e-26       4     100 ..     214     311 ..     212     312 .. 0.97

  Alignments for each domain:
  == domain 1  score: 89.8 bits;  conditional E-value: 5.8e-29
                      HHHHHHHHHHHHHHHHTTTSCSEEEEEEETTEEEEEEESBHHCCTGTTB-HHHHHHHHHHHH.TSSCETTEEEEEEE--BHHHHHHHHHHT-SE CS
  dCMP_cyt_deam_1   4 dekllelalkaakeaqkcsnfkVGavivkngeiistgyngepaggsktiHAEvnAilkaakn.ggsklegatlyvtlePCsmCakaiiqsgikk 96 
                      +ek+++la+++a+++ +  +++VG+v+v +ge+i++gyn+++++ s + HAE++Ai +++++ ++s + ++tlyvt+ePC mCa a+ q++i+ 
       EPX71072.1 214 HEKYMKLAHEMAETSLANREVPVGCVFVYKGEVIGRGYNQTNCSLSGIRHAEIIAIEEILEKyPSSVFSETTLYVTVEPCLMCAAALKQLHIEA 307
                      89************************************************************7799**************************** PP

                      EEEE CS
  dCMP_cyt_deam_1  97 vvvg 100
                      v++g
       EPX71072.1 308 VYFG 311
                      *997 PP

>> MafB19-deam  MafB19-like deaminase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.1   0.0   1.2e-23   1.7e-20       3     106 ..     214     317 ..     213     331 .. 0.95

  Alignments for each domain:
  == domain 1  score: 73.1 bits;  conditional E-value: 1.2e-23
  MafB19-deam   3 kekafrkalaevekatkikedkigavivkdkkviargsnekelnakataHaEiaalqqAakklkskrlddatlyvtlepCdmCagaivqaglkklvyg 100
                  +ek+++ a +++e  +   e+++g+v v +++vi+rg+n+++   +   HaEi a++   +k  s+  +++tlyvt+epC mCa a+ q  +  + +g
   EPX71072.1 214 HEKYMKLAHEMAETSLANREVPVGCVFVYKGEVIGRGYNQTNCSLSGIRHAEIIAIEEILEKYPSSVFSETTLYVTVEPCLMCAAALKQLHIEAVYFG 311
                  89************************************************************************************************ PP

  MafB19-deam 101 agnpks 106
                  +gn  +
   EPX71072.1 312 CGNDRF 317
                  *98765 PP

>> SNAD4  Secreted Novel AID/APOBEC-like Deaminase 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   1.3e-07    0.0002      22      63 ..     257     303 ..     242     308 .. 0.81

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 1.3e-07
       SNAD4  22 e.....haEllflekikseldpsqeyrvtwylswsPCaeCaekiaef 63 
                 +     haE++ +e+i +++ +s+  + t+y+++ PC  Ca+++ ++
  EPX71072.1 257 SlsgirHAEIIAIEEILEKYPSSVFSETTLYVTVEPCLMCAAALKQL 303
                 235567***********************************998765 PP

>> PRK  Phosphoribulokinase / Uridine kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       2.2   3.3e+03       1      24 [.      10      33 ..      10      66 .. 0.76
   2 !   15.1   0.0   9.4e-06     0.014     109     190 ..      96     177 ..      31     183 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 2.2
         PRK  1 vIgvagsSGaGkttvarklekifg 24
                +I++ag   aGk  + ++l  +++
  EPX71072.1 10 IIAIAGGPYAGKKRLCNELLTRLE 33
                899999999999888777766665 PP

  == domain 2  score: 15.1 bits;  conditional E-value: 9.4e-06
         PRK 109 gadvlviEGlhalydervaelldlkiyvdisidlelarklqRDiaeRGrsleavldsil.rrkpdyvnyikpqfseadliiqr 190
                 +  v++ EG + l  e + ++   k +v ++ d +l r ++R +      l  vld ++   kp+y+  i+p+ ++ad+i+++
  EPX71072.1  96 KDRVVFTEGYYLLLPELLPSYTS-KLFVYADGDTRLERSVIRRVCGDHEVLAEVLDDFVqNAKPAYEMSIHPTRENADIILPQ 177
                 45799999999999999888875.9999999***********99999999999**999989*******************986 PP

>> APOBEC3  APOBEC3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.1   9.4e-06     0.014      30      70 ..     261     300 ..     238     307 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 9.4e-06
     APOBEC3  30 kkHAEerfidkirslnldslkqykitcylswsPcpkCaeel 70 
                  +HAE+ +i++i +++ +s    + t+y++  Pc  Ca+ l
  EPX71072.1 261 IRHAEIIAIEEILEKYPSSVF-SETTLYVTVEPCLMCAAAL 300
                 58************7777665.899*************987 PP

>> NAD1  Novel AID APOBEC clade 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.1   1.1e-05     0.017      41      91 ..     250     302 ..     225     307 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 1.1e-05
        NAD1  41 Gvleneskc......HaEllflnkikslklldpsqkykvtwylswSPCseCasklae 91 
                 G+ +   +c      HaE++ +++i  l+ + +s   + t+y++  PC  Ca+ l +
  EPX71072.1 250 GYNQT--NCslsgirHAEIIAIEEI--LEKYPSSVFSETTLYVTVEPCLMCAAALKQ 302
                 44433..33445556**********..666689999****************99876 PP

>> APOBEC2  APOBEC2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.1   1.6e-05     0.023      46      91 ..     253     302 ..     238     307 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.6e-05
     APOBEC2  46 kekkc......HaEllflskvkkkkleekkeykvtwyvswsPCaeCaeevae 91 
                 + ++c      HaE++ ++++ + k+ ++   + t+yv+  PC  Ca+ + +
  EPX71072.1 253 Q-TNCslsgirHAEIIAIEEILE-KYPSSVFSETTLYVTVEPCLMCAAALKQ 302
                 4.333444556***********9.888888999**************99876 PP

>> Bd3614-deam  Bd3614-like deaminase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   1.9e-05     0.029      74      95 ..     280     301 ..     270     308 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 1.9e-05
  Bd3614-deam  74 leegarllvtlqcCkmCAalvv 95 
                  +  +++l+vt ++C mCAa + 
   EPX71072.1 280 VFSETTLYVTVEPCLMCAAALK 301
                  55789*************9765 PP

>> APOBEC4_like  APOBEC4-like -AID/APOBEC-deaminase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   4.5e-05     0.067      26      77 ..     253     304 ..     236     312 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 4.5e-05
  APOBEC4_like  26 yrnrteksklehaevnflekirser.kkvsctivwylsispCaecskrllefl 77 
                    +n ++ s  +hae+  +e+i ++  ++v  + ++y+ + pC  c+++l + +
    EPX71072.1 253 QTN-CSLSGIRHAEIIAIEEILEKYpSSVFSETTLYVTVEPCLMCAAALKQLH 304
                   444.4677789**********998865666677999***********998655 PP

>> APOBEC_N  APOBEC-like N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   3.6e-05     0.054      36      95 ..     250     303 ..     215     307 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 3.6e-05
                 EEEEEE-..SS..TBCHHHHHHHHHHHHT--.TTEEEEEEEEESS-S-HH....HHHHHHHH CS
    APOBEC_N  36 GvLrnqsgaaa..skHaEelflediedqelrepkkkyeitlYvswsPChessdeCaeklaaf 95 
                 G+  nq  +     +HaE + +e+i   e++  +   e tlYv++ PC      Ca +l+++
  EPX71072.1 250 GY--NQTNCSLsgIRHAEIIAIEEIL--EKYPSSVFSETTLYVTVEPCLM----CAAALKQL 303
                 55..44433224679*****888754..4442478889************....***99986 PP

>> Inv-AAD  Invertebrate-AID/APOBEC-deaminase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0     0.067     1e+02      12      54 ..     100     157 ..      90     170 .. 0.77
   2 ?    8.5   0.1    0.0011       1.7      10      64 ..     244     294 ..     237     303 .. 0.60

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.067
     Inv-AAD  12 ilatGytlel...............eGnthaeqccliklaekhevaeeklaevlpknt 54 
                 + ++Gy l l               +G+t  e++ + ++  +hev  e l +++++  
  EPX71072.1 100 VFTEGYYLLLpellpsytsklfvyaDGDTRLERSVIRRVCGDHEVLAEVLDDFVQNAK 157
                 45667777666667777777788889*******************9999998887755 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0011
     Inv-AAD  10 neilatGytlel...eGnthaeqccliklaekhevaeeklaevlpkntvlYttmepCs 64 
                 +e++ +Gy        G  hae  ++  + ek+        + + ++t lY t+epC 
  EPX71072.1 244 GEVIGRGYNQTNcslSGIRHAEIIAIEEILEKYP-------SSVFSETTLYVTVEPCL 294
                 4555555543222335555555555544444332.......23556899********6 PP

>> NAD2  Novel AID APOBEC clade 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00023      0.35      52      95 ..     260     302 ..     229     308 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00023
        NAD2  52 sklhaellfLskfvlrqlelaqeykvtwyvsWsPCpeCaaevae 95 
                    hae+  ++++  ++ + +   + t yv+  PC  Caa +++
  EPX71072.1 260 GIRHAEIIAIEEIL-EKYPSSVFSETTLYVTVEPCLMCAAALKQ 302
                 456*********96.7888899899**************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (386 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       485  (0.0270511); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 2951.24
//
Query:       EPX71073.1  [L=152]
Description: 40S ribosomal protein S18 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.4e-53  178.8   4.1    6.2e-53  178.6   4.1    1.0  1  Ribosomal_S13  Ribosomal protein S13/S18
     0.0037   16.1   0.0     0.0041   15.9   0.0    1.2  1  FbpA           Fibronectin-binding protein A N-terminus (FbpA
     0.0085   16.3   0.3      0.033   14.4   0.1    2.0  2  HHH_6          Helix-hairpin-helix motif
  ------ inclusion threshold ------
      0.061   12.9   0.1      0.086   12.4   0.1    1.2  1  Period_C       Period protein 2/3C-terminal region


Domain annotation for each model (and alignments):
>> Ribosomal_S13  Ribosomal protein S13/S18
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.6   4.1   1.4e-56   6.2e-53       1     128 []      14     142 ..      14     142 .. 0.99

  Alignments for each domain:
  == domain 1  score: 178.6 bits;  conditional E-value: 1.4e-56
  Ribosomal_S13   1 RilgtdidgkkkveialtaikGiGrrkakiilkkadvdedkrigelteeeiekieeivenkaqykipnwi.nrqkdikdGkdshvvendlrrklre 95 
                    R+l+t++dgk+kv++a+t+ikG+Grr+a+i++kkadvd++kr+gelt ee+e++++iv+n++q+kip+w+ nrqkdi+dGk++++++n+++ klre
     EPX71073.1  14 RLLNTNVDGKQKVMYAMTQIKGVGRRYANIVCKKADVDMSKRAGELTTEELERLVTIVQNPTQFKIPTWFlNRQKDINDGKSHQLLSNNVEGKLRE 109
                    89********************************************************************************************** PP

  Ribosomal_S13  96 dieRlkkirsyrGlRHkrGlkvRGQrTkttgRt 128
                    d+eRlkki+++rGlRH   l+vRGQ+TkttgR+
     EPX71073.1 110 DLERLKKIQAHRGLRHALDLRVRGQHTKTTGRR 142
                    ********************************7 PP

>> FbpA  Fibronectin-binding protein A N-terminus (FbpA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   9.2e-07    0.0041     187     237 ..      23      73 ..       4     119 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 9.2e-07
                 XXXHHHHHHHBTTXXHHHHHHHHTTXSSSH...............HHHHHH CS
        FbpA 187 kdlvkaLvkafqGlspllaeelleragldketsakelseedlerlyealqe 237
                 k+ v   +++++G+++ +a+ ++++a +d  ++a el++e+lerl + +q+
  EPX71073.1  23 KQKVMYAMTQIKGVGRRYANIVCKKADVDMSKRAGELTTEELERLVTIVQN 73 
                 44444557899**********************************988876 PP

>> HHH_6  Helix-hairpin-helix motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.1   7.4e-06     0.033      21      76 ..      22      69 ..      10      71 .. 0.82
   2 ?   -1.5   0.0      0.71   3.2e+03      68      81 ..     108     121 ..      86     132 .. 0.62

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 7.4e-06
       HHH_6 21 edgairlGLaaikglgeaaaerivaeRekegpfksledlarrvdslnkrqleaLak 76
                 ++++++++++ikg+g++ a+ + ++ +         d+++r+++l++++le+L++
  EPX71073.1 22 GKQKVMYAMTQIKGVGRRYANIVCKKAD--------VDMSKRAGELTTEELERLVT 69
                3455**************9988887443........799999999*******9997 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.71
       HHH_6  68 krqleaLakaGald 81 
                 +++le+L k+ a +
  EPX71073.1 108 REDLERLKKIQAHR 121
                 45555555555544 PP

>> Period_C  Period protein 2/3C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   1.9e-05     0.086      95     137 ..      77     119 ..      46     122 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.9e-05
    Period_C  95 lqdPiWllmantdeevmmtYQlpsrdleeVLkeDrekLkalqk 137
                 ++ P W l+ + d +   + Ql s ++e  L+eD e+Lk++q 
  EPX71073.1  77 FKIPTWFLNRQKDINDGKSHQLLSNNVEGKLREDLERLKKIQA 119
                 45699********999*************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       646  (0.036031); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1126.19
//
Query:       EPX71074.1  [L=323]
Description: MADS-box transcription factor Pvg4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0028   17.1   0.8     0.0054   16.2   0.4    1.6  1  SRF-TF    SRF-type transcription factor (DNA-binding and dime
  ------ inclusion threshold ------
       0.53   10.3   2.5        1.5    8.8   2.5    1.8  1  Zap1_zf2  Zap1 zinc finger 2


Domain annotation for each model (and alignments):
>> SRF-TF  SRF-type transcription factor (DNA-binding and dimerisation domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.4   6.1e-07    0.0054       2      17 ..      11      26 ..      10      27 .. 0.92

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 6.1e-07
      SRF-TF  2 IeneraRqvtFsKRrn 17
                I ++r+R+vtFsKR++
  EPX71074.1 11 ILDDRSRSVTFSKRKS 26
                89************96 PP

>> Zap1_zf2  Zap1 zinc finger 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   2.5   0.00017       1.5       8      24 .]      39      55 ..      38      55 .. 0.89

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00017
    Zap1_zf2  8 FegeDicSLiNHINdkH 24
                F + D    iNH+N++H
  EPX71074.1 39 FSSHDFQRTINHVNTNH 55
                778888889******** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       671  (0.0374254); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2492.75
//
Query:       EPX71075.1  [L=103]
Description: RNAseP RNAse MRP subunit Pop6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.8e-11   41.9   0.3    9.8e-07   28.8   0.0    2.0  2  Rpp20     Rpp20 subunit of nuclear RNase MRP and P
  ------ inclusion threshold ------
      0.064   13.1   0.0      0.098   12.5   0.0    1.3  1  Alba      Alba


Domain annotation for each model (and alignments):
>> Rpp20  Rpp20 subunit of nuclear RNase MRP and P
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   0.1   1.6e-05      0.14       2      27 ..      12      37 ..      11      42 .. 0.91
   2 !   28.8   0.0   1.1e-10   9.8e-07      64     111 ..      41      87 ..      36      95 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 1.6e-05
       Rpp20  2 vpktiyVssktpfmsavkRvqklLeq 27
                v+k ++V++kt++++++kRv+  Le 
  EPX71075.1 12 VRKGFIVRRKTHLIAMMKRVKHQLER 37
                57899*****************9986 PP

  == domain 2  score: 28.8 bits;  conditional E-value: 1.1e-10
       Rpp20  64 VfvkatGrAiekalsvgrwfqekeeykvrvetgsVevvDdivedeeek 111
                 V ++ tG+Ai++ + ++ ++q++ +y++  +t+++e+ D+i ++++ k
  EPX71075.1  41 VQYQSTGMAIPQLVTLADKYQHQ-GYRIALSTETIEFTDEIMTEDDFK 87 
                 78899****************88.9*****************999765 PP

>> Alba  Alba
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.1e-05     0.098       5      52 ..      18      63 ..      15      75 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.1e-05
                E-STS-HHHHHHHHHHHHTHTTESEEEEEEETTHHHHHHHHHHHHHHH CS
        Alba  5 VsskspimsyvkralklLsnkkeeeVvlkatGraIskAvsvaeilkrr 52
                V +k+ +   +kr++++L  +  + V   +tG aI  +v++a   + +
  EPX71075.1 18 VRRKTHLIAMMKRVKHQL--ERSGCVQYQSTGMAIPQLVTLADKYQHQ 63
                78999*************..9*******************99765555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       602  (0.0335769); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 797.82
//
Query:       EPX71076.1  [L=261]
Description: hypothetical protein SOCG_01294 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.014   15.4   2.4      0.014   15.4   2.4    2.8  3  TMF_DNA_bd     TATA element modulatory factor 1 DNA binding
      0.095   12.5   0.6        0.2   11.4   0.5    1.6  1  Herpes_UL92    UL92 family
       0.14   12.6   6.4        1.5    9.2   0.2    3.2  3  Bac_RepA_C     Replication initiator protein A C-terminal dom
       0.36   11.7  12.3       0.11   13.3   5.3    2.7  2  FliT           Flagellar protein FliT
       0.37   11.1   2.8       0.69   10.3   0.8    2.3  2  kleA_kleC      Uncharacterized KorC regulated protein A
       0.68    9.2   6.6        1.1    8.6   6.6    1.4  1  DUF4407        Domain of unknown function (DUF4407)
        3.7    7.7  19.6         22    5.2  19.6    2.2  1  Tropomyosin_1  Tropomyosin like
        6.8    5.5   7.8        7.5    5.3   7.8    1.2  1  LMBR1          LMBR1-like membrane protein
          9    6.8   8.7         33    5.0   0.1    2.8  2  DUF4140        N-terminal domain of unknown function (DUF4140


Domain annotation for each model (and alignments):
>> TMF_DNA_bd  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8  12.0     0.058   1.2e+02      16      64 ..      24      72 ..      22      80 .. 0.88
   2 ?   15.4   2.4   7.1e-06     0.014      11      72 ..      54     115 ..      49     117 .. 0.94
   3 ?   -3.3   0.1       4.6   9.2e+03       9       9 ..     135     135 ..     123     148 .. 0.56

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.058
  TMF_DNA_bd 16 qLmeEGekLskkelklnntikkLrkknkelekeikelkkkleklekele 64
                qL+eE e+ +k+ lk  + + + +  n+ele +i+el kk++ l  + +
  EPX71076.1 24 QLKEEEENQRKELLKYQKLLRNENDANAELEATIDELRKKTDHLRHQNQ 72
                9*************************************99987766555 PP

  == domain 2  score: 15.4 bits;  conditional E-value: 7.1e-06
  TMF_DNA_bd  11 DeqIaqLmeEGekLskkelklnntikkLrkknkelekeikelkkkleklekeleeleerlke 72 
                 +++I++L++    L+++++++ n +k+   +   +    +el +k++ le ++ +  ++lk+
  EPX71076.1  54 EATIDELRKKTDHLRHQNQQNDNFLKSFHDESGSSVHRKSELRDKIKVLEDSVLNYHASLKR 115
                 799**************************************************999999987 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 4.6
  TMF_DNA_bd   9 e 9  
                 e
  EPX71076.1 135 E 135
                 2 PP

>> Herpes_UL92  UL92 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.5   9.8e-05       0.2      50     137 ..      63     145 ..      53     160 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 9.8e-05
  Herpes_UL92  50 ltGncvvnniqesellepieeakldeqedlealeniveavkkdvysylikekeklaevseeileedglkkevedlikvtfneclkvfr 137
                  +t +   +n q++++l+  + ++   ++ +++l++ +++++  v +y  + k + a+  + il+e  l k++++ +++ +n    v++
   EPX71076.1  63 KTDHLRHQNQQNDNFLKSFHDESGSSVHRKSELRDKIKVLEDSVLNYHASLKRDQAQ-LKVILQERDLAKSISEKLQTSLN----VLH 145
                  566667788899************************************555554444.456777777**999999999888....333 PP

>> Bac_RepA_C  Replication initiator protein A C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.6     0.068   1.4e+02      21      78 ..      16      73 ..       6      84 .. 0.60
   2 ?    9.2   0.2   0.00076       1.5      26      71 ..     106     149 ..      93     160 .. 0.80
   3 ?    2.1   0.0      0.13   2.5e+02       7      50 ..     176     220 ..     172     241 .. 0.76

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.068
  Bac_RepA_C 21 eyigiilkA.kyavekaervlgvailldeeelqelitktLrrffnslri.sknkkvknve 78
                +  g++l   k + e++++ l ++  l +   +++ + +L + +  lr+ +++  ++n +
  EPX71076.1 16 RQTGLVLLQlKEEEENQRKELLKYQKLLR--NENDANAELEATIDELRKkTDHLRHQNQQ 73
                55666665557777777666665555543..34455666777777777654554444444 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00076
  Bac_RepA_C  26 ilkAkyavekaervlgvailldeeelqelitktLrrffnslriskn 71 
                 +l+ +++ ++++   +  ++l+e +l ++i ++L++++n+l  ++n
  EPX71076.1 106 VLNYHASLKRDQA--QLKVILQERDLAKSISEKLQTSLNVLHSQSN 149
                 5677777777777..556788999*****************97665 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.13
  Bac_RepA_C   7 nlLslyantpkklheyigiilkA.kyavekaervlgvailldeee 50 
                 +lL+ y++ ++++++  +++    ++      +   +++ l++ +
  EPX71076.1 176 DLLRHYSDISDRMEKMYTLLVDTsRAHRVALTDATKSYTYLFDSN 220
                 68999**9***********99884444444445555777777555 PP

>> FliT  Flagellar protein FliT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   5.3   5.6e-05      0.11      32      83 ..      22      75 ..       7      76 .. 0.89
   2 ?    1.9   0.5      0.21   4.1e+02      22      74 ..     128     180 ..      92     192 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 5.6e-05
                -ST--HHHHHHHHHHHH..HHHHHHHHHHHHHHHHHHHHHHHHCHTHHHHHHHH CS
        FliT 32 aaplspaereekrellr..rilandaeirallqprldelqkllgalrrqrkann 83
                  +l ++e+++  ell+  ++l n++   a l++  del+k+ + lr+q++ n+
  EPX71076.1 22 LLQLKEEEENQRKELLKyqKLLRNENDANAELEATIDELRKKTDHLRHQNQQND 75
                67799999*****************************************99886 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.21
                 HHHHHHHCS--ST--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH CS
        FliT  22 qlverlreldaaplspaereekrellrrilandaeirallqprldelqkllga 74 
                  l+ +++e  ++ l+   ++   +l++ ++ + +  ++++  + d+ ++ll+ 
  EPX71076.1 128 DLAKSISEKLQTSLNVLHSQSNPQLIQDLIVETKNCKSRVTDQIDHSGDLLRH 180
                 45556666667777777888888899999999999999998888888888875 PP

>> kleA_kleC  Uncharacterized KorC regulated protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.8   0.00035      0.69      17      52 ..      41      76 ..      34      84 .. 0.85
   2 ?   -0.3   0.0      0.71   1.4e+03      32      67 ..      91     127 ..      78     134 .. 0.65

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00035
   kleA_kleC 17 tdlvarRdkiAaklaeAeeLvrqaeeLRakvyeesa 52
                + l+++ d+ A++ a  +eL ++ ++LR++  ++  
  EPX71076.1 41 KLLRNENDANAELEATIDELRKKTDHLRHQNQQNDN 76
                558999***********************9877665 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.71
   kleA_kleC  32 eAeeLvrqaeeLRakvyeesaaLe.drakkrWtleev 67 
                 +  eL  +++ L   v++  a+L+ d+a+ +  l+e 
  EPX71076.1  91 RKSELRDKIKVLEDSVLNYHASLKrDQAQLKVILQER 127
                 5567777777777777777777752445555555555 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   6.6   0.00053       1.1     114     245 ..      24     186 ..      14     209 .. 0.56

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00053
     DUF4407 114 eeqqeeakelkeqlaaaltaelaeleaqiaalqaeidaaearldalraeaqkeldgtk....gtgttgvaGkgpaake..................... 187
                 + ++ee+++ ke l+  +++ l+++++ +a+l+a+id+++++ d lr + q++ +  k     +g + v++k +  ++                     
  EPX71076.1  24 QLKEEEENQRKELLK--YQKLLRNENDANAELEATIDELRKKTDHLRHQNQQNDNFLKsfhdESGSS-VHRKSELRDKikvledsvlnyhaslkrdqaq 119
                 444444444444455..9999999999999************9999999996644333555433322.3333333333444555555544444444444 PP

     DUF4407 188 ..........kkaqldaaqaelaelkakldatarlaalraelaeleaerakeraasqaaaaaddGlla 245
                           +k+  +++q+ l+ l+++ ++ + +++l  e +  +++ +++++ s +  +  +++ +
  EPX71076.1 120 lkvilqerdlAKSISEKLQTSLNVLHSQ-SNPQLIQDLIVETKNCKSRVTDQIDHSGDLLRHYSDISD 186
                 4444444444444444444444444444.344444555555555555555555555555555555555 PP

>> Tropomyosin_1  Tropomyosin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2  19.6     0.011        22       2     104 ..      22     121 ..      21     152 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.011
  Tropomyosin_1   2 lnsLkleaeeaqekaeeleekvKeleqenlekeqeiksLtkknqqleeevekleeklkeakekaeesekkktnnealtrkiqlLEeeleesdkkLk 97 
                    l +Lk e+e+  +   ++++ +++ ++ n e e  i +L kk ++l ++  + ++ lk  ++++ +s ++k+   +l  ki++LE+ + +  ++Lk
     EPX71076.1  22 LLQLKEEEENQRKELLKYQKLLRNENDANAELEATIDELRKKTDHLRHQNQQNDNFLKSFHDESGSSVHRKS---ELRDKIKVLEDSVLNYHASLK 114
                    5689*******999*******************************************999887777766665...6999*******9999999999 PP

  Tropomyosin_1  98 ettekLr 104
                        +L+
     EPX71076.1 115 RDQAQLK 121
                    8888765 PP

>> LMBR1  LMBR1-like membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   7.8    0.0038       7.5     198     321 ..      28     146 ..      10     230 .. 0.73

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0038
       LMBR1 198 ldeelkklyfeaaklntekeeaereledllkevkklrksisesdplrkyleeilkkvPeeiaeklksnenkteeslaklekqlikalqkrertekqwkr 296
                  +e  +k  ++ +kl  ++++a+ ele + +e++k ++ ++++++    +++ lk++  e  + ++  +++  ++++ le ++ +  +  +r ++q+k 
  EPX71076.1  28 EEENQRKELLKYQKLLRNENDANAELEATIDELRKKTDHLRHQNQ---QNDNFLKSFHDESGSSVH-RKSELRDKIKVLEDSVLNYHASLKRDQAQLKV 122
                 233333444667799999999999999999999999988888884...455555544443333322.23445667777778888888999999999999 PP

       LMBR1 297 llekalelediiknksskekefkss 321
                 +l++  +l + i++k +++ ++ +s
  EPX71076.1 123 ILQER-DLAKSISEKLQTSLNVLHS 146
                 99999.4333333333333333333 PP

>> DUF4140  N-terminal domain of unknown function (DUF4140)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   3.7     0.044        87      59      90 ..      44      73 ..       8      81 .. 0.68
   2 ?    5.0   0.1     0.017        33      66      97 ..      91     122 ..      76     123 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.044
     DUF4140 59 nreaeeeelkalraeleeledelaaledelaa 90
                ++  e+++ ++l+a+++el+++ ++l+ + + 
  EPX71076.1 44 RN--ENDANAELEATIDELRKKTDHLRHQNQQ 73
                22..2224788888888888888888877765 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.017
     DUF4140  66 elkalraeleeledelaaledelaaaearlaf 97 
                 + ++lr++++ led   ++ ++l++ +a+l++
  EPX71076.1  91 RKSELRDKIKVLEDSVLNYHASLKRDQAQLKV 122
                 5789*************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2341  (0.130571); expected 358.6 (0.02)
Passed bias filter:                      635  (0.0354175); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.53u 0.29s 00:00:00.82 Elapsed: 00:00:00.41
# Mc/sec: 1900.37
//
Query:       EPX71077.1  [L=363]
Description: 60S ribosomal protein L2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.1e-41  140.5   1.2    6.8e-41  140.1   1.2    1.2  1  Ribosomal_L4     Ribosomal protein L4/L1 family
      6e-28   96.7   3.4      6e-28   96.7   3.4    2.2  2  Ribos_L4_asso_C  60S ribosomal protein L4 C-terminal domain
  ------ inclusion threshold ------
      0.054   12.6   0.1      0.087   12.0   0.1    1.2  1  PIF1             PIF1-like helicase


Domain annotation for each model (and alignments):
>> Ribosomal_L4  Ribosomal protein L4/L1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.1   1.2   1.1e-44   6.8e-41       2     190 ..      23     261 ..      22     263 .. 0.93

  Alignments for each domain:
  == domain 1  score: 140.1 bits;  conditional E-value: 1.1e-44
                   EE-HHHHSS---HHHHHHHHHHHHHSS-EE-----.-TTTSS---S-SS-SSSSSS---S-TT............STTSTT---SS---S.EEHHHH CS
  Ribosomal_L4   2 eLspkvFaapirrdlihravvaylanrrqgtastk.arsevsgsgrklwkQKGtGrARvgsir............spiargGgvahgpkperdystk 85 
                   +L p vF+apir+dl++++++a  +n+rq++a +  a++++s+  +++++  G++ AR++++              +++r+G+++ ++k++r+++ k
    EPX71077.1  23 AL-PFVFKAPIRPDLVRSVHTAVAKNKRQPYAVSEkAGHQTSA--ESWGT--GRALARIPRVGgggthragqaafGNMCRSGRMFAPTKTWRKWHVK 114
                   67.99***************************9888*******..6****..********************************************* PP

                   HHHHHHHHHHHHHHHHHHHTT-EEEES....---.-S............S--HHHHHHHHHHTT-..........................TTSSEE CS
  Ribosomal_L4  86 lnkKvrrlAlrsaLsakakqglllvvd....nleple............esktkelvellkklgl..........................ksksvL 140
                   +n+ ++r+A++sa++a    +lll+++    +   +             ++ktke+v+llk+l++                          +++++L
    EPX71077.1 115 VNQNEKRYAIASAVAASGVPSLLLARGhrveE---IAevplvvedsiqtIQKTKEAVALLKELKAyrdvakvtnsrklragkgklrnrryvQRRGPL 208
                   ***************************74442...33366779999999*************99999999999999999999999999999999*** PP

                   EEESSSSCHHHHHHTT-TTEEEEESTT--CHHHHHSSE....EEEEHHHHHHHH CS
  Ribosomal_L4 141 ivvsekdenlvlaarnlpgvevieveslnvydllkadk....vvitksavekle 190
                   +v++e d ++v+a+rn+pgve+++v++ln+++l+++ +    v++tksa++ l+
    EPX71077.1 209 VVFNE-DAGIVKAFRNVPGVELVNVRRLNLLQLAPGGHlgrfVIWTKSAFDLLD 261
                   ***97.********************************************9886 PP

>> Ribos_L4_asso_C  60S ribosomal protein L4 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1      0.17     1e+03      15      46 ..     180     208 ..     170     212 .. 0.70
   2 !   96.7   3.4     1e-31     6e-28       1      70 [.     275     345 ..     275     351 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.17
  Ribos_L4_asso_C  15 lsRiinSdeiqsvlrpakkekkkkr.vqkkNPL 46 
                      ++++ nS      lr+ k++ +++r vq++ PL
       EPX71077.1 180 VAKVTNSR----KLRAGKGKLRNRRyVQRRGPL 208
                      55555553....477777777777778988888 PP

  == domain 2  score: 96.7 bits;  conditional E-value: 1e-31
  Ribos_L4_asso_C   1 kgynLPrpkmtnaDlsRiinSdeiqsvlrpakkekkkkr..vqkkNPLknkqvmlrLNPyakvlrraallaq 70 
                      k+y LP+++++naD++R+inSdeiqs+++pa ++++ kr  vqkkNPLknk+vmlrLNPyak+++++    +
       EPX71077.1 275 KDYVLPQNVISNADVTRLINSDEIQSIVKPA-GPAVVKRtnVQKKNPLKNKNVMLRLNPYAKAYKHNVKIDS 345
                      79*****************************.667777779***********************99866555 PP

>> PIF1  PIF1-like helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   1.5e-05     0.087      47     103 ..     119     174 ..     105     190 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1.5e-05
                 HCTCCCEEEEESSHHHHHCC.TSEECHHHHT-TTSSS-HHHHHHHTSCCCHHHHHC- CS
        PIF1  47 rsegkivlavAssGvAalllegGrtahsrfkiplekdeestckikrgsklaellkkt 103
                 +++  i+ avA sGv +lll +G  +   +++pl +++  +  i++ ++   llk+ 
  EPX71077.1 119 EKRYAIASAVAASGVPSLLLARGHRVEEIAEVPLVVEDSIQT-IQKTKEAVALLKEL 174
                 445678899*************************99876665.77777776666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (363 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       527  (0.0293937); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 2493.24
//
Query:       EPX71078.1  [L=805]
Description: hypothetical protein SOCG_01296 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (805 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       768  (0.0428356); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.61u 0.28s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 5508.01
//
Query:       EPX71079.1  [L=249]
Description: carbonic anhydrase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      3e-49  167.3   0.7    4.2e-49  166.8   0.1    1.5  2  Pro_CA     Carbonic anhydrase
  ------ inclusion threshold ------
      0.067   13.8   0.2         11    6.7   0.0    2.4  2  GTP-bdg_M  GTP-binding GTPase Middle Region


Domain annotation for each model (and alignments):
>> Pro_CA  Carbonic anhydrase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1      0.56     5e+03     103     138 ..      18      52 ..       4      55 .. 0.55
   2 !  166.8   0.1   4.6e-53   4.2e-49       2     156 .]      81     231 ..      80     231 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.56
                 HTTSSHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHH CS
      Pro_CA 103 esekekearerlleeenVaeqlenLlekpvvreave 138
                 +++ e+++ ++ +   nV  +  +++++p +++ +e
  EPX71079.1  18 DNQ-EQTETTDEVPPTNVIPSEGKVVQSPELKNLLE 52 
                 232.33333444477777777777777777776665 PP

  == domain 2  score: 166.8 bits;  conditional E-value: 4.6e-53
                 EEEEETTTTS-HHHHTTS-TTSEEEEEETTG---TT-HHHHHHHHHHHHTS--SEEEEEEETT-HHHHHHHSHHCCSTTSSHHHHHHHHHHHHHHHCHH CS
      Pro_CA   2 lvigCsDSRvppelitdagpGdlFvvrnvgnlvppadssvlaaleyAvevlkvkhivVlGHskCGavkaalkaekseeeagaidkwlekirealekvee 100
                 ++igCsDSRvp+++++d  pG++Fv+rn++n+vp +d + laa+ey+v++lkvkhi+V+GH++CG+v+aa+   +   +++ +d+wl++ir+++e +++
  EPX71079.1  81 MWIGCSDSRVPETTVLDLLPGEVFVHRNIANVVPRSDINALAAMEYSVTALKVKHIIVCGHYGCGGVAAAMGP-S---TNNLMDHWLRHIRDVIEDNRS 175
                 8*******************************************************************99974.2...2589***************** PP

                 HHHTTSSHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHTTS-EEEEEEEETTTTEE CS
      Pro_CA 101 elesekekearerlleeenVaeqlenLlekpvvreavekgklkvhGlvydletGev 156
                 el+++k++++r  +l+e+n ++q  ++++  +vr+a+e++ l+vhG+vyd+ tG++
  EPX71079.1 176 ELDAIKDPHERGLRLAELNTRAQAVSVTRVGFVRQAMESRGLQVHGWVYDVGTGRI 231
                 ***********999****************************************85 PP

>> GTP-bdg_M  GTP-binding GTPase Middle Region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   1.0    0.0094        85      55      75 ..       4      24 ..       2      27 .. 0.88
   2 ?    6.7   0.0    0.0012        11      12      71 ..     120     183 ..     119     189 .. 0.74

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.0094
                HHHHHHHHHHHHHHHHHHH.. CS
   GTP-bdg_M 55 reriaklkkeLekvkkkrelq 75
                ++r +kl++++e+++++++++
  EPX71079.1  4 HRRFDKLRRRIEEIDNQEQTE 24
                5899************99986 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0012
                 HHHHHHHHHHHHCXXXXXXXXX..X.....XXXXXXXXX.HHHHHHHHHHHHHHHHHHHHHHHH CS
   GTP-bdg_M  12 elAqlkyllprLeglgkelsrqgGgig...trGpGetkl.eldrrlireriaklkkeLekvkkk 71 
                 +lA ++y+ + L+ ++     + G +g    +Gp   +l +   r+ir+ i++ ++eL+++k  
  EPX71079.1 120 ALAAMEYSVTALKVKHIIVCGHYGCGGvaaAMGPSTNNLmDHWLRHIRDVIEDNRSELDAIKDP 183
                 58999999999954444444443422345788988777537889***************99975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       709  (0.0395449); expected 358.6 (0.02)
Passed bias filter:                      620  (0.0345808); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 1857.04
//
Query:       EPX71080.1  [L=109]
Description: 60S acidic ribosomal protein P2B subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.2e-27   94.0  12.8    7.1e-27   93.8  12.8    1.0  1  Ribosomal_60s  60s Acidic ribosomal protein
  ------ inclusion threshold ------
       0.04   14.8   0.2      0.057   14.3   0.2    1.2  1  TT_ORF2        TT viral ORF2


Domain annotation for each model (and alignments):
>> Ribosomal_60s  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.8  12.8   7.9e-31   7.1e-27       1      88 []      17     108 ..      17     108 .. 0.89

  Alignments for each domain:
  == domain 1  score: 93.8 bits;  conditional E-value: 7.9e-31
                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXX..XX--SS--STTT CS
  Ribosomal_60s   1 eptaenikkvlkaagveveaarvkllvkalegkdieellangaakla...aaaaaaaaaaaaaaaaaaaeekkkeeeee.EeedddmGfgLF 88 
                    +p+a++i++vl+++g+e e arv+ l+++l+gk+ieel+a+g++kla   +++aaa aaaaa++aa+aaee+kkee ++ Ee+d+dmGfgLF
     EPX71080.1  17 SPSASDIETVLSTVGIESETARVESLLSELQGKNIEELIAAGNEKLAtvpSGGAAAPAAAAAGEAAPAAEEAKKEEAKQeEESDEDMGFGLF 108
                    59***********************************************96667777777777777777777777777779*********** PP

>> TT_ORF2  TT viral ORF2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.2   6.4e-06     0.057      40      88 ..      57     105 ..      47     108 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 6.4e-06
     TT_ORF2  40 atqlsleepqgkrpkrklilrqspalpaakeekkklakwlettgedaet 88 
                 a++ +l  ++  +++ + ++ + +a paa+e+kk++ak+ e ++ed ++
  EPX71080.1  57 AGNEKLATVPSGGAAAPAAAAAGEAAPAAEEAKKEEAKQEEESDEDMGF 105
                 555556667777777777999999**********************988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       854  (0.0476323); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.43
# Mc/sec: 766.90
//
Query:       EPX71081.1  [L=480]
Description: histone lysine methyltransferase Set6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.6e-14   53.5   0.7    2.1e-13   51.0   0.7    2.2  1  SET             SET domain
      1e-10   41.5  14.6      1e-10   41.5  14.6    2.2  2  zf-MYND         MYND finger
  ------ inclusion threshold ------
        1.9    8.5  11.9        1.4    9.0   5.8    2.4  2  zinc-ribbons_6  zinc-ribbons


Domain annotation for each model (and alignments):
>> SET  SET domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.0   0.7   3.5e-17   2.1e-13       1     168 [.      14     226 ..      14     227 .. 0.62

  Alignments for each domain:
  == domain 1  score: 51.0 bits;  conditional E-value: 3.5e-17
                 SCEEEESSXBXTTXEEE.......................EEEECCEECHHHHHHHHHH........................................ CS
                 xxxxxxxxxxxxxxxxx.......................xxxxxxxxxxxxxxxxxxx........................................ RF
         SET   1 GrGvfAtedIpkgefic.......................eypeeiiltkdeadksele........................................ 36 
                 GrGv+A e+I++g++++                       e                                                          
  EPX71081.1  14 GRGVVAAERIQPGTILLskivdnfalevgilsthcsgctsE-----------------Gektkrctacktiyycskacqkadwplhklecralqasrhn 95 
                 9***************8544444444444333333333330.................12233333455555555555555555555559999999999 PP

                 ............HTEEEEEXGGXX...............GGSXHHHHHHHTTSSHHHHHHHHHHHHHHHHHHTHHHHHHHXTTTSXXXHCCCCCHCCCH CS
                 ............xxxxxxxxxxxx...............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         SET  37 ............aylfslpeapkn...............laftkelakasastllqklakdqkqaekedtdaalkasskaesdlnaskpeagafsaiag 108
                              y++sl++  k+                ++t+++  asa   ++k+ + +  +  +   a + +                      +
  EPX71081.1  96 gilpsicrllirLYAMSLKDP-KStelleshitdfpkvaASWTDAELIASAASHYTKIYQPDLFRFLFCKVAINSMNL-------------------VT 174
                 999999999998666666532.11222333333333334444455555555555555555555555555555555544...................44 PP

                 EEEETEEEEEECCCGTTGGGCEEXSSSSEEEEEEEETTSSEEEEEESSXBXTTEEEEEXT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         SET 109 ysidaralksgngagplarflNHsCdpNcnltvqnvlrgprvavfAtrdIkkGeEltidY 168
                 +s+d      ++      + +NHsC pNc  +v +  +g r++++A+r+I+k+e+l+i+Y
  EPX71081.1 175 CSFDRLGVCLDTDL----SRINHSCVPNC--HVIF--EGSRAILVASREIEKNEQLFISY 226
                 77886666666777....88*********..6666..69********************* PP

>> zf-MYND  MYND finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.5  14.6   1.7e-14     1e-10       1      38 []      48      86 ..      46      86 .. 0.92
   2 ?   -1.5   0.3      0.46   2.7e+03       1       6 [.     250     255 ..     244     267 .. 0.72

  Alignments for each domain:
  == domain 1  score: 41.5 bits;  conditional E-value: 1.7e-14
                -TTT--..B-SCE-TTTS-SEESSHHHHHHCHHHHCCCH CS
     zf-MYND  1 CavCgk.aealkkCagCksvfYCskeCqradwksHkteC 38
                C+ C    e++k+C+ Ck+++YCsk+Cq+adw+ Hk eC
  EPX71081.1 48 CSGCTSeGEKTKRCTACKTIYYCSKACQKADWPLHKLEC 86
                888988666777*************************** PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.46
                 -TTT-- CS
     zf-MYND   1 CavCgk 6  
                 C++C k
  EPX71081.1 250 CEKCTK 255
                 555555 PP

>> zinc-ribbons_6  zinc-ribbons
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   5.8   0.00023       1.4      16      50 ..      45      79 ..      35      94 .. 0.79
   2 ?    2.4   0.3     0.026   1.5e+02      17      40 ..     248     258 ..     233     273 .. 0.63

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00023
                    EEE-TTT--EEEEEEE-SSS-S---EEEETTEEEE CS
  zinc-ribbons_6 16 qyhCeaCqedlkkealCpeCeqelevlkaCgavdy 50
                    ++hC+ C+++ +k++ C  C+      kaC ++d+
      EPX71081.1 45 STHCSGCTSEGEKTKRCTACKTIYYCSKACQKADW 79
                    57999999999999999999999999999988886 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.026
                     EE-TTT--EEEEEEE-SSS-S--- CS
  zinc-ribbons_6  17 yhCeaCqedlkkealCpeCeqele 40 
                     ++Ce+C+++             l+
      EPX71081.1 248 CECEKCTKE-------------LS 258
                     444444444.............33 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (480 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       941  (0.0524848); expected 358.6 (0.02)
Passed bias filter:                      465  (0.0259356); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 3216.01
//
Query:       EPX71082.1  [L=303]
Description: leucine carboxyl methyltransferase Ppm1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.2e-28   98.0   0.0    1.7e-27   96.6   0.0    1.7  1  LCM       Leucine carboxyl methyltransferase


Domain annotation for each model (and alignments):
>> LCM  Leucine carboxyl methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.6   0.0   9.6e-32   1.7e-27       3     187 ..       4     187 ..       2     188 .. 0.93

  Alignments for each domain:
  == domain 1  score: 96.6 bits;  conditional E-value: 9.6e-32
                 HHHHHHHHHHHHH..HHTSSHTCCCCCCCHHHHHHHHCHCCCHCHHCHGCHCCCCT--HHHHHHHHHHHHHHHHHHHHHH.HCTTESEEEEET-TT--H CS
         LCM   3 gvaaaralesrra..adglidDplaeslvsaaglellerkadkelekekeeekkekkapelnrgiavRtrffddllkaal.saagirqvViLGAGlDtr 98 
                   +  +al++r +  + g+idDp++++++ +++                      +k p +nrg++vRt+ +d++lk++l + +g +q++ LGAG Dtr
  EPX71082.1   4 LETDLDALKCRMSatKMGYIDDPYIQYFLPKRSI---------------------HKPPIINRGTYVRTWSIDHVLKNFLtKIEGKKQIISLGAGTDTR 81 
                 578899*****955999***************54.....................469**********************999**************** PP

                 HHHHHHTT...TEEEEEEE-HHHHHHHHHHHHHSHHHHH................EECSEEE--TTSHHHHHHHHHHTT-TTSEEEEEEESSGGGS-HH CS
         LCM  99 ayRlpwla...glkvfEvDqpevlefKretlkelgaepk................aelryvpvDlrdddwpeaLaaagfdpekptawvaeGvlvYLtpe 178
                 a+R         +k++E+D   ++ +K + +++++a+                  ++l   p+D+r   +pea      d++ pt++++e++l+YL+p+
  EPX71082.1  82 AFRFLAKLpkeTIKFIELDLYPNCVRKVQSIAKQEALLAmlgdykldatkgmllsDSLDILPLDIR--CIPEAGLPDTADESLPTIVLSECCLCYLEPN 178
                 ***876655799*****************************************9999999******..8999988888********************* PP

                 HHHHHHHHH CS
         LCM 179 asdalleai 187
                 +++++++++
  EPX71082.1 179 EANSICQWF 187
                 *****9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (303 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       452  (0.0252106); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 2096.01
//
Query:       EPX71083.1  [L=979]
Description: karyopherin Los1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-34  119.5   1.8    1.2e-34  119.5   1.8    3.4  4  Xpo1      Exportin 1-like protein


Domain annotation for each model (and alignments):
>> Xpo1  Exportin 1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.5   1.8   6.7e-39   1.2e-34       1     149 []     101     253 ..     101     253 .. 0.95
   2 ?    1.4   0.1     0.017   3.1e+02      59      98 ..     353     392 ..     330     448 .. 0.67
   3 ?   -1.8   0.1      0.16   2.9e+03      42     129 ..     773     784 ..     736     821 .. 0.54
   4 ?   -3.4   0.0      0.52   9.3e+03      22      37 ..     961     976 ..     947     978 .. 0.76

  Alignments for each domain:
  == domain 1  score: 119.5 bits;  conditional E-value: 6.7e-39
                 THHHHHHHHHHHHHHHHHHTTTTSTTHHHHHH..HHHCT.HHHHHHHHHHHHHHHHHHHT..SHTTTSCHHHHHHHHHHHHHH.HHHHHHHHHHHHHHH CS
        Xpo1   1 pkflrnklaealaelflqeypnnWpsffddll..sllssspsglelllriLkvlpeEiad..fsrskleqerrndlkdllrsn.vqkilelllqileqs 94 
                 p+++ n ++++l+ lf+q+yp  W++ff++l   +++ss+ +  e++l++L+++ eE+ad  + +s+ ++++ +++kd++r++ +++i++++++++ ++
  EPX71083.1 101 PAYIINAIQHLLTLLFIQLYPVGWNDFFQSLQsmAASSSQVEPSEFYLKMLLSIGEEVADslIPKSTTQAQQSTAVKDAIREKdMSQIVSFVFDMMVAY 199
                 6799***************************954666667999*******************999999999**************************** PP

                 HHCCHHHHHHHHHHHHHHHHTTTS-HHHHHTSCHHHHHHHHCCSCCCHHHHHHHH CS
        Xpo1  95 qskkqsselveavLkclsswvswidiglivnnpllnllfqlLsdpelreaavecL 149
                 +++ +s + v  +L+++++wvswi+i+l+vn+p++nll+++L+ pelr+aa+e++
  EPX71083.1 200 SNA-KSYSPVVLSLQVFGQWVSWINISLVVNEPCMNLLYSFLQIPELRCAACETI 253
                 *98.59999*******************************************986 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.017
                 SHTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC CS
        Xpo1  59 fsrskleqerrndlkdllrsnvqkilelllqileqsqskk 98 
                 f ++ l++ r++   + l+++ +++l++llq l++ ++ +
  EPX71083.1 353 FLSDLLTSLRKESSSQPLDDSSKQLLTSLLQALSKKMTYD 392
                 5556667777777777788887888888888777776655 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 0.16
                 HHHHHHHHHHHHHHHHTSHTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTTS-HHHHHTSCHH CS
        Xpo1  42 lelllriLkvlpeEiadfsrskleqerrndlkdllrsnvqkilelllqileqsqskkqsselveavLkclsswvswidiglivnnpll 129
                 +e++ ++L +                                                                            ll
  EPX71083.1 773 MEVISNLLPS----------------------------------------------------------------------------LL 784
                 2222222222............................................................................22 PP

  == domain 4  score: -3.4 bits;  conditional E-value: 0.52
                 TTSTTHHHHHHHHHCT CS
        Xpo1  22 nnWpsffddllsllss 37 
                  ++++ff+++++++++
  EPX71083.1 961 RTFKQFFQKFIQAIKK 976
                 5678899999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (979 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       883  (0.0492498); expected 358.6 (0.02)
Passed bias filter:                      586  (0.0326845); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.76u 0.30s 00:00:01.06 Elapsed: 00:00:00.47
# Mc/sec: 6239.96
//
Query:       EPX71084.1  [L=211]
Description: U3 snoRNP-associated protein Utp16 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.6e-10   39.8   4.0    5.6e-10   39.8   4.0    2.8  2  U3_snoRNA_assoc  U3 snoRNA associated
  ------ inclusion threshold ------
      0.013   15.3   0.1      0.019   14.8   0.1    1.4  1  Qn_am_d_aIV      Quinohemoprotein amine dehydrogenase, alpha 
        4.4    7.3  19.7        5.2    7.1  19.7    1.2  1  Asp-B-Hydro_N    Aspartyl beta-hydroxylase N-terminal region
        9.7    5.0  10.2         12    4.6  10.2    1.2  1  PA26             PA26 p53-induced protein (sestrin)


Domain annotation for each model (and alignments):
>> U3_snoRNA_assoc  U3 snoRNA associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3  13.2       1.7   7.8e+03       9      53 ..      38      84 ..      12     101 .. 0.65
   2 !   39.8   4.0   1.3e-13   5.6e-10       2      90 .]     103     193 ..     102     193 .. 0.77

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1.7
  U3_snoRNA_assoc  9 alee.redeeeaeeekskhin......eepkkarkkkkkekllelkekrpkd 53
                     ++e+ + d++ea+    ++++      e++++ ++ + +e++l + ek+++ 
       EPX71084.1 38 QEESeS-DSDEAP----EEVSvkssslEAKERLKQLHDHERRLRENEKEKRR 84
                     333322.222222....22223344677777777777777777776666553 PP

  == domain 2  score: 39.8 bits;  conditional E-value: 1.3e-13
  U3_snoRNA_assoc   2 LPdeilealee.redeeeaeeekskhin..eepkkarkkkkkekllelkekrpkdvkkGpvsvrVlkssnssklaPkaekkirnskekwLkR 90 
                      L+ +ile+++  +e+++e++e+     +  e   +++k       + lk++++k +kkG+++v+Vl++s++ +laP +  k  ++k +wL+R
       EPX71084.1 103 LDLSILEDAAReEEAKDEEDEDDYDT-EslEHVPMNNKILFPTEEAPLKRRKNKVIKKGDFKVSVLDASKKDHLAPGSDAKLSQKKRSWLQR 193
                      78889988888533333333333222.23566666677666667777899****************************************98 PP

>> Qn_am_d_aIV  Quinohemoprotein amine dehydrogenase, alpha subunit domain IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.1   4.2e-06     0.019      52     113 ..     111     173 ..      79     195 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 4.2e-06
  Qn_am_d_aIV  52 akWsveefdeeaekdeDveyvgkl.aakglftPasaGPnpaRklstnnvGnlkVvAtvedegk 113
                  a  + e+ dee e+d D+e + ++  ++ +  P+++ P ++Rk +    G+ kV    + ++ 
   EPX71084.1 111 AAREEEAKDEEDEDDYDTESLEHVpMNNKILFPTEEAPLKRRKNKVIKKGDFKVSVLDASKKD 173
                  555678889**************999999*********************9999765444444 PP

>> Asp-B-Hydro_N  Aspartyl beta-hydroxylase N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1  19.7    0.0012       5.2      80     214 ..      23     129 ..       6     200 .. 0.44

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0012
  Asp-B-Hydro_N  80 eeaevvaeeeeqlaeekekqkveeevkEqlkkvkeeivvkeeeeegieeepqleeekkllkedsderqeeleagkvkeevEeslkveetvseeakk 175
                    +e++   + +e++++++e +   +e+ E++       ++ke+ ++                +d + r +e+e +k+  + E++ + + t +e++k 
     EPX71084.1  23 NEKKSSPKIKEEIPHQEESESDSDEAPEEVSVKSSSLEAKERLKQL---------------HDHERRLRENEKEKRRAANEKNRQRNATLQEAQKL 103
                    2222222333333333333333333333333333333333322222...............23333333333333333333333333333333322 PP

  Asp-B-Hydro_N 176 dm..kekaseeenekskepveeaekekaeakeveeedkeee 214
                    d+   e a++ee++k                e +e+d++ e
     EPX71084.1 104 DLsiLEDAAREEEAKD---------------EEDEDDYDTE 129
                    2111111111111111...............1111111111 PP

>> PA26  PA26 p53-induced protein (sestrin)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6  10.2    0.0028        12     180     262 ..      24     108 ..       9     142 .. 0.65

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.0028
        PA26 180 dlesskklksasas.anekedsseeeeeelerkaaaeaeaevealmermkklqeeedeeeeaseeelserf.ekeeseslllaaa 262
                 +++ss+k+k++ ++ +++++ds e+ ee + ++++ ea+++++ l ++ ++l+e+e+e++ a +e++ +r  + +e+++l l   
  EPX71084.1  24 EKKSSPKIKEEIPHqEESESDSDEAPEEVSVKSSSLEAKERLKQLHDHERRLRENEKEKRRAANEKNRQRNaTLQEAQKLDLSIL 108
                 33444555555554234677777888888888889999999999*9999999999988885555555444435555555554443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2686  (0.149813); expected 358.6 (0.02)
Passed bias filter:                      668  (0.0372581); expected 358.6 (0.02)
Passed Vit filter:                        98  (0.005466); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.62u 0.32s 00:00:00.94 Elapsed: 00:00:00.46
# Mc/sec: 1378.98
//
Query:       EPX71085.1  [L=418]
Description: ubiquitin protease cofactor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.6e-30  104.7   0.6    1.2e-29  103.4   0.0    1.9  2  NTF2      Nuclear transport factor 2 (NTF2) domain
    1.8e-10   40.5   0.0    3.6e-10   39.5   0.0    1.5  1  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
     0.0056   16.8   0.0      0.021   14.9   0.0    2.0  1  RRM_7     RNA recognition motif
  ------ inclusion threshold ------
      0.038   14.0   0.0      0.082   13.0   0.0    1.5  1  RRM_3     RNA binding motif
       0.94    8.6   4.1       0.23   10.6   0.1    1.9  2  DUF4518   Domain of unknown function (DUF4518)


Domain annotation for each model (and alignments):
>> NTF2  Nuclear transport factor 2 (NTF2) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.4   0.0   3.2e-33   1.2e-29       2     120 .]      19     134 ..      18     134 .. 0.97
   2 ?   -1.4   0.1      0.95   3.4e+03      39      80 ..     258     301 ..     242     304 .. 0.66

  Alignments for each domain:
  == domain 1  score: 103.4 bits;  conditional E-value: 3.2e-33
                 HHHHHHHHHHHHHHHGGGGGGGGEEEEEEEEEETTE....EEEESHHHHHHHHHHSSCSCEEEEEEEEEEEETSEGGGCEEEEEEEEEEEETTSCCEEE CS
        NTF2   2 akafvqqYYaaldagdregllalyaadaslltpegs....spvkgreaIteffrslpftrielkittvdaqpdeaslstgvlvmvtGelkvddfkkrrk 96 
                 ++ fvq+YY+ l++ +++ l+ +y +++s+l + ++    s ++g+++I++++  l+f+++++ i++vd+    as ++g++++v Ge++++++   rk
  EPX71085.1  19 GWMFVQEYYTYLNK-EPHRLHCFY-TKKSTLVHGEEgeaiSLCHGQQEIHNKILDLDFQNCKVLISNVDSL---ASCNGGIVIQVLGEMSNKGKL-SRK 111
                 789***********.*********.**********99**********************************...9*******************7.9** PP

                 EEEEEEEEEETTTEEEEEEEEEEE CS
        NTF2  97 fsqtfilapqsnkgyfvlnDifrl 120
                 f+qtf+la+q  +gyfvlnDifr+
  EPX71085.1 112 FAQTFFLAEQP-NGYFVLNDIFRF 134
                 **********9.9**********7 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.95
                 EEESHHHHHHHHHHSSCSCEEEEEEEEEEEE..TSEGGGCEEEE CS
        NTF2  39 pvkgreaIteffrslpftrielkittvdaqp..deaslstgvlv 80 
                 + k+++a+t+ + s  +++   + ++  aq+  +e++l+t+v+v
  EPX71085.1 258 ESKSQAAVTDSVPSQQQSSTIKPANVPTAQQpqTEKQLETSVFV 301
                 56777777777777777765666666666655666666666665 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.5   0.0     1e-13   3.6e-10       1      57 [.     299     350 ..     299     356 .. 0.96

  Alignments for each domain:
  == domain 1  score: 39.5 bits;  conditional E-value: 1e-13
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHH CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAle 57 
                 +fV+n+p+dv+e++Lk++++ fG++ks++  r      kg+a+V+F+++   + Al+
  EPX71085.1 299 VFVKNIPNDVSEDNLKQVLGVFGSVKSVEYARR-----KGTAYVDFNDHTCVQTALA 350
                 8*******************************5.....**************99997 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   5.8e-06     0.021       3      36 ..     298     332 ..     296     370 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 5.8e-06
       RRM_7   3 kvFvGGlPiDiteeelkatfkefgkvl.vdwPkka 36 
                  vFv  +P D++e++lk+ ++ fg+v+ v++ +++
  EPX71085.1 298 SVFVKNIPNDVSEDNLKQVLGVFGSVKsVEYARRK 332
                 59**********************99548998874 PP

>> RRM_3  RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   2.3e-05     0.082       6      56 ..     301     351 ..     298     369 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2.3e-05
                 EEE-SSS--HHHHHHHCHCCS-ECEEEE-TTSSEEEEEESSHHHHHHHHHH CS
       RRM_3   6 lsGlnkelsredikellsklgevayvdyekgdkegevrFkedeeakkalek 56 
                 ++ + +++s +++k++l  +g+v+ v+y++ + +++v F+++   + al k
  EPX71085.1 301 VKNIPNDVSEDNLKQVLGVFGSVKSVEYARRKGTAYVDFNDHTCVQTALAK 351
                 556678999********************************9887777655 PP

>> DUF4518  Domain of unknown function (DUF4518)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.1   6.3e-05      0.23     134     256 ..      17     123 ..      10     125 .. 0.83
   2 ?   -2.6   0.7       0.7   2.5e+03      93     128 ..     258     288 ..     241     303 .. 0.38

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 6.3e-05
     DUF4518 134 llaeeFtkWFfellnsqnpslgqskedlgpqhFwedaklklllsasseeqveevegaeevserLlslvkeeslllnPnleseGvkgrisphGlVlvlva 232
                 +++ +F++ ++  ln++   l+          F+   k +l+   +++e    ++g++e+ +++l l +++  +l  n++s      +s +G ++++v 
  EPX71085.1  17 EIGWMFVQEYYTYLNKEPHRLH---------CFYTK-KSTLV-HGEEGEAISLCHGQQEIHNKILDLDFQNCKVLISNVDS-----LASCNGGIVIQVL 99 
                 5677888888888888333333.........36654.44444.688888899***************************99.....7899999****** PP

     DUF4518 233 GtihrensclGiFEqifgLirdPl 256
                 G + ++++    F q+f L ++P+
  EPX71085.1 100 GEMSNKGKLSRKFAQTFFLAEQPN 123
                 ****999************99996 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.7
     DUF4518  93 lwksesqseeaskkeatssksqqeneeeskeakeee 128
                   ks     +a+ +++++s++q+++ +  + +++++
  EPX71085.1 258 ESKS-----QAAVTDSVPSQQQSSTIKPANVPTAQQ 288
                 2222.....222222222222222222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (418 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1078  (0.0601261); expected 358.6 (0.02)
Passed bias filter:                      500  (0.0278878); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.57u 0.29s 00:00:00.85 Elapsed: 00:00:00.45
# Mc/sec: 2765.61
//
Query:       EPX71086.1  [L=219]
Description: CENP-H Fta3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.1e-12   46.0   5.8    1.3e-11   44.9   5.8    1.5  1  CENP-H          Centromere protein H (CENP-H)
     0.0077   16.3   0.1      0.021   14.9   0.1    1.7  1  Sin3_corepress  Sin3 family co-repressor
  ------ inclusion threshold ------
      0.034   14.4   0.3      0.067   13.5   0.3    1.5  1  RcbX            RbcX protein
      0.046   13.7   0.8      0.086   12.8   0.8    1.4  1  Cut12           Spindle pole body formation-associated protei
       0.11   11.1   1.9       0.14   10.7   1.9    1.1  1  FapA            Flagellar Assembly Protein A
        0.3   11.2  13.1       0.13   12.3   8.5    2.5  3  Mod_r           Modifier of rudimentary (Mod(r)) protein


Domain annotation for each model (and alignments):
>> CENP-H  Centromere protein H (CENP-H)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.9   5.8   4.3e-15   1.3e-11      16     110 ..     103     207 ..      96     209 .. 0.72

  Alignments for each domain:
  == domain 1  score: 44.9 bits;  conditional E-value: 4.3e-15
      CENP-H  16 lklsqelrelqeeltevekenlrlkrknre...laaellelakekesek........eklkeelekleaelkksrqrwrvvknvasaiivgSgVdWaeD 103
                 + l qe ++l ++  +ve+e+++l+rk +e   l++++ e a++k + +        e +++++e+++ el+++r rw++++nv++ ii++Sg  +a+D
  EPX71086.1 103 ESLLQEQNHLSDQNLQVEEEIIELNRKIQEeriLLQSI-EPASQKVAGSllqhssksEVYRDSMESIQHELRTERCRWEILRNVVQVIILESGSSFADD 200
                 55666666677777777777777776666522233333.33333333335666654344889************************************* PP

      CENP-H 104 ekLrelV 110
                 e+L +++
  EPX71086.1 201 EQLLQIM 207
                 ****998 PP

>> Sin3_corepress  Sin3 family co-repressor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.1   6.9e-06     0.021      35      92 ..      91     148 ..      84     155 .. 0.91

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 6.9e-06
  Sin3_corepress  35 vsvptwasedsgsfkasrknqyeealfrcEderyelDmvieanrstiklleelakkie 92 
                      svp+ +s+ + +   +++n++ ++ +++E+e +el+  i+  r  ++++e+  +k++
      EPX71086.1  91 SSVPSNHSKAYVESLLQEQNHLSDQNLQVEEEIIELNRKIQEERILLQSIEPASQKVA 148
                     599********999999***********************************999875 PP

>> RcbX  RbcX protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.3   2.2e-05     0.067      41      97 ..      86     143 ..      80     157 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 2.2e-05
                 HHHHHHHSTTSSHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHGGG.HHHHHHHHHHHH CS
        RcbX  41 LskfsskeklqdgeayleeLlrenkeLalRiltvRehlaeevlef.lpelvrkgiqqa 97 
                 L++fss+   + + ay+e+Ll+e+++L    l+v e++ e       +++  ++i+ a
  EPX71086.1  86 LQEFSSSVPSNHSKAYVESLLQEQNHLSDQNLQVEEEIIELNRKIqEERILLQSIEPA 143
                 89*********************************99998665552233555555555 PP

>> Cut12  Spindle pole body formation-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.8   2.9e-05     0.086      79     141 ..      97     159 ..      87     162 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2.9e-05
       Cut12  79 daelEieklikyrslaksyakkKdeealrlkeklkeEeekvaemekkvselaskvvskksksd 141
                 ++++ +e+l++ ++++    ++ +ee+++l++k++eE+  +++ e   +++a ++ +++sks+
  EPX71086.1  97 HSKAYVESLLQEQNHLSDQNLQVEEEIIELNRKIQEERILLQSIEPASQKVAGSLLQHSSKSE 159
                 5667789************************************************99999887 PP

>> FapA  Flagellar Assembly Protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   1.9   4.8e-05      0.14     330     424 ..      93     186 ..      84     211 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 4.8e-05
        FapA 330 ldepelkeklkeleeeleeleeeleklkkk.ikklpklkaekqlesekkeqlkklletkeklkeeleeleeelkelkeeleskkeeakikvnkeiy 424
                 +  ++ k+ ++ l +e + l ++  +++++ i++++k+++e  l + ++   +k+  ++ +++++ e  ++ ++++++el++     ++++ + ++
  EPX71086.1  93 VPSNHSKAYVESLLQEQNHLSDQNLQVEEEiIELNRKIQEERILLQSIEPASQKVAGSLLQHSSKSEVYRDSMESIQHELRTE--RCRWEILRNVV 186
                 554556666799********99999999998999999999*****************************************99..34666666554 PP

>> Mod_r  Modifier of rudimentary (Mod(r)) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.2      0.41   1.2e+03      30      69 ..       9      49 ..       2      88 .. 0.56
   2 ?   12.3   8.5   4.5e-05      0.13      17      83 ..      85     150 ..      75     175 .. 0.82
   3 ?    2.4   0.2     0.051   1.5e+02      36      88 ..     138     190 ..     135     216 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.41
       Mod_r 30 qlkeekeellaeneslaeknlslep.eleelrselqeklee 69
                ++ +++  lla+  ++ e+  s++   l++  +++ +  +e
  EPX71086.1  9 NQCQRLVGLLASSPATSENHDSKQGfLLQQREDRTYQIWKE 49
                45555555555555555555555443333333333333333 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 4.5e-05
       Mod_r  17 klealvktlpevkqlkeekeellaeneslaeknlslepeleelrselqekleelkelekefeekeqe 83 
                 +l+++ +++p+ +  k++ e+ll+e+ +l ++nl+ e+e+ el  ++qe++  l+++e + ++    
  EPX71086.1  85 LLQEFSSSVPS-NHSKAYVESLLQEQNHLSDQNLQVEEEIIELNRKIQEERILLQSIEPASQKVAGS 150
                 67888888888.899**********************************999999988777766554 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.051
       Mod_r  36 eellaeneslaeknlslepeleelrselqekleelkelekefeekeqeldell 88 
                 ++++ + +++a + l++  + e  r+++++  +el++ ++++e + +  + ++
  EPX71086.1 138 QSIEPASQKVAGSLLQHSSKSEVYRDSMESIQHELRTERCRWEILRNVVQVII 190
                 566777888999999999999999****99999***99999998877666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1005  (0.0560544); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.46u 0.28s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 1525.54
//
Query:       EPX71087.1  [L=256]
Description: Vac7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.4e-13   49.4  15.4      1e-12   48.3  15.5    1.5  1  Vac7          Vacuolar segregation subunit 7
  ------ inclusion threshold ------
      0.086   12.8   0.1       0.17   11.9   0.1    1.5  1  IGFL          Insulin growth factor-like family
       0.58   10.2   6.4       0.22   11.6   1.8    2.0  2  Casein_kappa  Kappa casein


Domain annotation for each model (and alignments):
>> Vac7  Vacuolar segregation subunit 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.3  15.5   1.7e-16     1e-12       2     216 ..      13     221 ..      12     235 .. 0.70

  Alignments for each domain:
  == domain 1  score: 48.3 bits;  conditional E-value: 1.7e-16
        Vac7   2 vEteTVsSiPqvalgagagergangslrlkpSteTirPkkekkktsrkqssvtsgtassKADiFeakvAsavdeanssDSdETFvYeS.N.Ppdsedrr 98 
                 vEteTV  + qv+++         gs   kpS e ++ kk+  k  +k+ sv ++  +sK  +F+a+vAsavd+   ++  E FvYeS N P d     
  EPX71087.1  13 VETETVMNVSQVQIS---------GSCSKKPSFEALKSKKNSSK--KKKVSV-PNVITSKSAMFAARVASAVDQDSNDEESENFVYESvNsPFD----- 94 
                 9***********987.........57889*******99998877..455545.678*****************98888888*******542444..... PP

        Vac7  99 krrfHSRtPSatSmasqvdqrsglrsiaevld...............seksvagkksmKFsnttynssaldsdseesdegkkrsrgegsgrgtarhhhi 182
                 +   HS + S  S+++     + l  i++v +                + ++  k+s KFs+ + + +++d ++++  +++    ++g +++ + h   
  EPX71087.1  95 EDSQHSPSNSIRSLQACNLPLEMLPPINHVSHygatcsngtslgatnWSPKIVPKRSAKFSSIPAA-ASTDLKNMS-PTAT----TRGLATHFPNHIPS 187
                 334588888888887765555555555555445555556777766656789999********8854.344444422.2333....34566788885544 PP

        Vac7 183 grygrkaknghsslfdeespftqaqksrakklsr 216
                 ++    +k + +s ++++s f + + s++ ++ +
  EPX71087.1 188 TKTHLLQKDNSQSWHSHHSRFLSETLSKSDSSPT 221
                 4444446778889999999999988666655533 PP

>> IGFL  Insulin growth factor-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   2.8e-05      0.17      17      79 ..       7      68 ..       5      72 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 2.8e-05
        IGFL 17 nPleqCCdddtvlslnrtrlCGpnCtfwpCfelCCpesvgaqkkfvvklkvlgvksqCksspi 79
                +P++   + +tv+++++++  G +C+ +p fe   +++ +++kk v    v + ks   ++ +
  EPX71087.1  7 KPMQMSVETETVMNVSQVQISG-SCSKKPSFEALKSKKNSSKKKKVSVPNVITSKSAMFAARV 68
                58899999**************.9**********99999999999988889999988777766 PP

>> Casein_kappa  Kappa casein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   1.8   3.7e-05      0.22      78     146 ..      17      86 ..       6      92 .. 0.82
   2 ?    0.6   0.2     0.087   5.2e+02      88     132 ..     148     192 ..     137     207 .. 0.60

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 3.7e-05
  Casein_kappa  78 vlpniypptvvrhpalhpsfiaippkkiqdkta.iptintiatvepTpvpttepvvntvvtpeassefii 146
                   ++ n+ + ++     ++psf a+ +kk+  k   +   n i++  + + +   ++v++  + e s +f+ 
    EPX71087.1  17 TVMNVSQVQISGSCSKKPSFEALKSKKNSSKKKkVSVPNVITSKSAMFAARVASAVDQDSNDEESENFVY 86 
                   567899999999999************98776515566888888888899999***********999986 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.087
  Casein_kappa  88 vrhpalhpsfiaippkkiqd.ktaip..tintiatvepTpvpttepvv 132
                    ++    + f  ip+    d k + p  t+  +at  p  +p t++  
    EPX71087.1 148 PKR---SAKFSSIPAAASTDlKNMSPtaTTRGLATHFPNHIPSTKTHL 192
                   333...455666666555553334440045558888888888887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1273  (0.0710023); expected 358.6 (0.02)
Passed bias filter:                      618  (0.0344693); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 1638.06
//
Query:       EPX71088.1  [L=591]
Description: DNA polymerase epsilon catalytic subunit B [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.3e-53  180.7   0.7    3.3e-53  180.2   0.7    1.2  1  DNA_pol_E_B  DNA polymerase alpha/epsilon subunit B
     0.0025   17.9   0.0      0.006   16.7   0.0    1.6  1  DNA_pol_D_N  DNA polymerase delta subunit OB-fold domain


Domain annotation for each model (and alignments):
>> DNA_pol_E_B  DNA polymerase alpha/epsilon subunit B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  180.2   0.7   3.7e-57   3.3e-53       1     210 [.     329     552 ..     329     553 .. 0.97

  Alignments for each domain:
  == domain 1  score: 180.2 bits;  conditional E-value: 3.7e-57
                  EEEEES--S-TT----HHHHHHHHHHH.HTT--SEEEEES-SSBTTSHHHHHT---S--SSHHHHHHHHTHHHHTTS-TTSEEEEE--TTBTT-S... CS
  DNA_pol_E_B   1 vvivsglnldndnrsleaLrkiLqgyapeesppdvlilaGnfvdaahkaiasskvstdekkenfdalalllsilesllekttvvlvPgpnDpans... 95 
                  +v++s+++ld d r l+aL+k++q+y+  e  p +++l+G+f+++a ++++ss     ++ke f++lal+ +++ ++++++++++vPgpnDp+++   
   EPX71088.1 329 FVFLSEVHLD-DTRCLQALEKVFQKYEYAELLPACIVLCGSFTSTAFHNSGSS----LDYKEGFNKLALIFAKFTNISKNCKIIFVPGPNDPWTTygl 421
                  69********.****************99***************999999777....49*************************************** PP

                  -SBSB----TTTTT--TTT...EEE--BSEEEEETTEEEEE--S-HHHH---EEESHHHH...............HS-HHHHHHHHHHHHTBS---SS CS
  DNA_pol_E_B  96 tvlPqqPlprlllsrikrvfkelklvtNPsrielnsvevvltsddivkdlkreslkesnt...............dverlrklvktildqrhlaPlap 178
                  +++P+ ++p ++++ri+r++k++++++NP+ri+++s+e+v++++di  +++r+ lk  n+               + ++ rklvktildq+hl+P++p
   EPX71088.1 422 SLMPKRAIPLHFVNRIQRICKNAIFSSNPCRISFFSQEIVIYREDITGRFQRHDLKACNDssqsaqsdtlpleeqQLYQNRKLVKTILDQSHLSPFHP 519
                  ********************************************************999999************************************ PP

                  --B-GGGGGGGB-GGG---SEEE---.SS--EE CS
  DNA_pol_E_B 179 tlrpvswdkddalvleplPdvlvlpd.elpeFa 210
                   +rpv wd d++l+  plP++l ++d + p F 
   EPX71088.1 520 RTRPVLWDFDYTLSTFPLPNCLAIVDsQVPAFN 552
                  **************************8888885 PP

>> DNA_pol_D_N  DNA polymerase delta subunit OB-fold domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   6.7e-07     0.006      82     130 .]     235     285 ..     230     285 .. 0.86

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 6.7e-07
  DNA_pol_D_N  82 ekdellLEDesgrvrLsgs..gieseklvtGvvvavlGvetengdfeVedi 130
                  ++ +l+LED +++v+L+ s  ++  ++++ G+ v v G+  ++g f V ++
   EPX71088.1 235 PDGKLWLEDLDSQVQLDISkaTFGFGHFCAGCFVLVNGHFMDSGVFLVTEV 285
                  5779*************7733555677*********************875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (591 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       402  (0.0224218); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.24s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 4212.40
//
Query:       EPX71089.1  [L=497]
Description: ubiquitin-protein ligase E3 RBBP6 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.7e-33  113.0   0.2    9.9e-33  112.3   0.2    1.4  1  DWNN          DWNN domain
    4.1e-08   32.9   5.6    4.1e-08   32.9   5.6    2.2  2  zf-CCHC_2     Zinc knuckle
    3.9e-05   23.4  13.4    3.9e-05   23.4  13.4    1.9  2  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
    0.00043   20.1  11.2    0.00043   20.1  11.2    1.8  2  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
     0.0029   17.9  12.6     0.0063   16.8  12.6    1.6  1  zf-RING_2     Ring finger domain
  ------ inclusion threshold ------
       0.02   14.9   0.6       0.02   14.9   0.6    1.8  1  zf-CCHC       Zinc knuckle
      0.023   14.4   2.7       0.04   13.6   2.7    1.3  1  Siva          Cd27 binding protein (Siva)
      0.055   13.3  14.5       0.12   12.3  14.5    1.6  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
       0.07   13.2   8.3       0.15   12.1   8.3    1.6  1  zf-RING_UBOX  RING-type zinc-finger
       0.16   11.9   0.2       0.16   11.9   0.2    2.1  1  zf-CCHC_3     Zinc knuckle
        6.7    6.8   8.7         47    4.0   6.9    2.7  2  HypA          Hydrogenase/urease nickel incorporation, metall


Domain annotation for each model (and alignments):
>> DWNN  DWNN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.3   0.2   6.1e-36   9.9e-33       1      74 []       5      79 ..       5      79 .. 0.98

  Alignments for each domain:
  == domain 1  score: 112.3 bits;  conditional E-value: 6.1e-36
        DWNN  1 vyYkFksqkdyskitfdgt.sisvfeLKreIiekkklgkgtdfdLqiynaqtkeeydddselIprntsvivrRvP 74
                +yYkFksqkd s++tfdgt ++svf++KreIi++kklg+g dfdL +yna+t+eeyddd+ +Ipr+tsvivrRvP
  EPX71089.1  5 IYYKFKSQKDPSRVTFDGTvGMSVFDVKREIIQQKKLGSGLDFDLLLYNANTNEEYDDDTYIIPRSTSVIVRRVP 79
                8*****************66******************************************************9 PP

>> zf-CCHC_2  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.9   5.6   2.5e-11   4.1e-08       1      21 []     185     205 ..     185     205 .. 0.99
   2 ?   -2.2   1.1       2.3   3.8e+03       6      11 ..     287     292 ..     287     292 .. 0.89

  Alignments for each domain:
  == domain 1  score: 32.9 bits;  conditional E-value: 2.5e-11
   zf-CCHC_2   1 PpgYvChiCgkkGHyIqdCPt 21 
                 PpgY+C +Cg kGH+Iq CPt
  EPX71089.1 185 PPGYICYRCGLKGHWIQACPT 205
                 9*******************8 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 2.3
   zf-CCHC_2   6 ChiCgk 11 
                 C iC+k
  EPX71089.1 287 CTICKK 292
                 9***87 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.4       1.5   2.4e+03      23      38 ..     190     204 ..     188     205 .. 0.65
   2 !   23.4  13.4   2.4e-08   3.9e-05       2      40 .]     287     326 ..     286     326 .. 0.97

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.5
  zf-C3HC4_2  23 CqkCilrsLeekneCP 38 
                 C+ C l+  +  + CP
  EPX71089.1 190 CYRCGLKG-HWIQACP 204
                 99999983.3344677 PP

  == domain 2  score: 23.4 bits;  conditional E-value: 2.4e-08
  zf-C3HC4_2   2 CpiCldmlkdpsvvtpCgHvfCqkCilrsLeekn.eCPlC 40 
                 C+iC    k+++++  C+  fC++Ci+++L + + eCP C
  EPX71089.1 287 CTICKKLAKNALRTPCCNQLFCEECIQTALLDTDfECPHC 326
                 ****************************9999999***** PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.3       1.6   2.5e+03      25      32 ..     189     196 ..     187     205 .. 0.64
   2 !   20.1  11.2   2.6e-07   0.00043       3      45 ..     285     328 ..     283     330 .. 0.92

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 1.6
                 E-HHHHHH CS
  zf-C3HC4_3  25 lCeeCaek 32 
                 +C++C  k
  EPX71089.1 189 ICYRCGLK 196
                 79999765 PP

  == domain 2  score: 20.1 bits;  conditional E-value: 2.6e-07
                 SB-TTTSSSBS-EEETTEEEEEE-HHHHHHHHH.TT-B-TTT-- CS
  zf-C3HC4_3   3 eeCviClerprnvvllpCgHlvlCeeCaekllk.rkkkCpiCrr 45 
                   C iC++  +n++  pC+ + +CeeC ++ l   + +Cp C++
  EPX71089.1 285 LACTICKKLAKNALRTPCCNQLFCEECIQTALLdTDFECPHCHK 328
                 57**************************998867********97 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8  12.6   3.9e-06    0.0063       2      43 ..     286     326 ..     285     327 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 3.9e-06
   zf-RING_2   2 eCpICleelssadsvlllpCgHv.fhreClerw.lrssstCPlC 43 
                  C+IC ++l   +++l++pC+   f++eC+++  l +  +CP C
  EPX71089.1 286 ACTIC-KKLA--KNALRTPCCNQlFCEECIQTAlLDTDFECPHC 326
                 5****.5664..556666788766******8863777777**** PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.6   1.2e-05      0.02       3      17 ..     190     204 ..     189     205 .. 0.94

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.2e-05
                 TSSSSSSSSTTTTST CS
     zf-CCHC   3 CynCGepGHiardCp 17 
                 Cy+CG  GH+   Cp
  EPX71089.1 190 CYRCGLKGHWIQACP 204
                 **************9 PP

>> Siva  Cd27 binding protein (Siva)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   2.7   2.5e-05      0.04      99     156 ..     274     331 ..     254     338 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 2.5e-05
        Siva  99 qsseasptgasiacsscvrsvddkavcsqcerllckqcvrtcsscsalacslctlvdy 156
                    + +p+ +s ac+ c++  ++      c++l c++c++t    +   c  c   d 
  EPX71089.1 274 DVYKMQPPDSSLACTICKKLAKNALRTPCCNQLFCEECIQTALLDTDFECPHCHKKDI 331
                 5567889999**********999999999*************9999999999988775 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3  14.5   7.1e-05      0.12       1      41 []     287     326 ..     287     326 .. 0.94

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 7.1e-05
                 -TTT-S--SS-E.E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepnelleCkHsfCskCirkilksrkkvkCPlC 41 
                 C iC++ ak++ ++  C+  fC++Ci++ l  ++ ++CP C
  EPX71089.1 287 CTICKKLAKNALRTPCCNQLFCEECIQTALL-DTDFECPHC 326
                 ************77777888***********.********* PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   8.3     9e-05      0.15       1      39 []     287     324 ..     287     324 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 9e-05
  zf-RING_UBOX   1 CpIClelftdPlv.lp.CGHtFCreClwelskslegafkCP 39 
                   C+IC+ l ++  + +p C   FC+eC+  ++  l++ f CP
    EPX71089.1 287 CTICKKLAKNA-LrTPcCNQLFCEECI--QTALLDTDFECP 324
                   *********88.436449*********..7999*******9 PP

>> zf-CCHC_3  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.2    0.0001      0.16       6      26 ..     189     208 ..     186     222 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.0001
   zf-CCHC_3   6 aCQkClkkGHwtYECknager 26 
                  C +C+ kGHw   C+  ++ 
  EPX71089.1 189 ICYRCGLKGHWIQACPT-NSD 208
                 79**********99994.433 PP

>> HypA  Hydrogenase/urease nickel incorporation, metallochaperone, hypA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       1.3   2.1e+03      67      90 ..     184     204 ..     140     210 .. 0.67
   2 ?    4.0   6.9     0.029        47      70      97 ..     305     331 ..     247     342 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 1.3
                 E--EEEETTTS-EEECHHHHHS-T CS
        HypA  67 vpvkvrCreCgkefeleekalrCp 90 
                  p  + C +Cg +++  +    Cp
  EPX71089.1 184 PPPGYICYRCGLKGHWIQ---ACP 204
                 455667888887766432...365 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.029
                 EEEETTTS-EEECHHHHHS-TTTSSS-E CS
        HypA  70 kvrCreCgkefeleekalrCpkCgsadv 97 
                 ++ C+eC ++  l+++ ++Cp+C+++d+
  EPX71089.1 305 QLFCEECIQTALLDTD-FECPHCHKKDI 331
                 5678999888887755.89*****9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (497 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       964  (0.0537676); expected 358.6 (0.02)
Passed bias filter:                      471  (0.0262703); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.57u 0.29s 00:00:00.85 Elapsed: 00:00:00.47
# Mc/sec: 3211.67
//
Query:       EPX71090.1  [L=552]
Description: ATP-dependent RNA helicase Dbp2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.1e-49  165.9   0.0    3.4e-48  163.7   0.0    1.9  2  DEAD            DEAD/DEAH box helicase
    3.9e-30  104.4   0.0    2.7e-29  101.7   0.0    2.1  2  Helicase_C      Helicase conserved C-terminal domain
    6.3e-07   29.6   0.0    1.6e-06   28.3   0.0    1.6  1  ResIII          Type III restriction enzyme, res subunit
  ------ inclusion threshold ------
      0.056   13.8   0.0        5.1    7.4   0.0    2.3  2  AAA_19          AAA domain
      0.086   12.5   0.0       0.24   11.1   0.0    1.7  2  AAA_30          AAA domain


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.7   0.0   9.4e-52   3.4e-48       1     176 []     143     314 ..     143     314 .. 0.96
   2 ?   -0.4   0.0      0.23   8.3e+02      69     112 ..     340     383 ..     330     423 .. 0.58

  Alignments for each domain:
  == domain 1  score: 163.7 bits;  conditional E-value: 9.4e-52
                 -HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHS...TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   1 tdiQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyet...kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldn 96 
                 t+iQ++a+p +++g+d+++  +TGsGKTl +++p++ ++  +      +gp +l+++PtreLa q+ ++++kf+   ++r  +++ggv++  q+++l +
  EPX71090.1 143 TAIQQQAWPMAMSGRDMVGISATGSGKTLTYCLPAIVHINAQpllAPGDGPIVLVLAPTRELAVQIQTECTKFGRSSRIRNTCVYGGVPRGPQIRDLIR 241
                 79**********************************9998889998999***************************99*******************99 PP

                 TCSEEEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  97 gvdivvgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkdvkkl 176
                 gv+i ++tpgrl+d+l+ +k nl++v++lVlDEadr+ld+gf+++i++i+ q+       + +rq++++SAT+pk+v++l
  EPX71090.1 242 GVEICIATPGRLLDMLDANKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQI-------RPDRQTLMFSATWPKEVQRL 314
                 9***************99***********************************.......35678*********999975 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.23
                 HHTTTSTSEEEEEETTSSHHHHHHHHHTTCSEEEEEHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  69 kfkkyidlrvlliiggvaardqlskldngvdivvgtpgrlddll 112
                 ++++ +d ++++   g + ++ l++  n+v i+ gt    dd++
  EPX71090.1 340 QVIQVVDNSEKSARLGRDIEEILKDRVNKVLIFTGTKRVADDIT 383
                 44444444444333333333333333355555555555555443 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.28     1e+03      10      57 ..     291     339 ..     285     352 .. 0.63
   2 !  101.7   0.0   7.6e-33   2.7e-29       8     111 .]     360     461 ..     349     461 .. 0.93

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.28
                 HHHTTTTSEEEEEESSHH.HHHH..HHHHHHHTTSTEEEESTTSTHHHHHH CS
  Helicase_C  10 lkleeeggkilifvntid.rlek..vklllekkgikvavlhgelpqneree 57 
                 +++ + ++++l+f+ t+  ++++   ++l  +  i+++v   +l+++++++
  EPX71090.1 291 VDQIRPDRQTLMFSATWPkEVQRlaRDYL--NDYIQCTVGSLDLSASHNIK 339
                 44458899999999999876654545666..44455555555555554444 PP

  == domain 2  score: 101.7 bits;  conditional E-value: 7.6e-33
                 HHHHHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHHHHHHHTT CS
  Helicase_C   8 ellkleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvtsyiqriGR 106
                 e+  l+ + +k+lif+ t++ +++++ +l++ g  ++++hg+  q+er+ +l +f++g+s v++atdva+rGid++++++V+n+d+p n+++y++riGR
  EPX71090.1 360 EI--LKDRVNKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLGEFRSGKSPVMVATDVASRGIDVKGITHVVNYDFPGNTEDYVHRIGR 456
                 44..478999**********999967777888******************************************************************* PP

                 SSSTT CS
  Helicase_C 107 tgRag 111
                 tgRag
  EPX71090.1 457 TGRAG 461
                 ***97 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.3   0.0   4.4e-10   1.6e-06      31     169 ..     163     307 ..     143     309 .. 0.83

  Alignments for each domain:
  == domain 1  score: 28.3 bits;  conditional E-value: 4.4e-10
                 ESTTSTHHHHH.HHHHHHH-S..........-EEEEESSHHHHHHHHHHGGGGTGG........GEEEESSS-B--.......-SEEEEEHHHHHHTH. CS
      ResIII  31 maTGtGKTlva.aklierllkkgkee.....kflflvprkslleqtleefkkflseayke....igkkvsgdkkkakekdstnkkilvttiqsldadse 119
                  aTG+GKTl++ + +i ++  +          +l+l+p+++l  q ++e +kf  + + +     g++ +g +    +  +   +i+++t  +l   + 
  EPX71090.1 163 SATGSGKTLTYcLPAIVHINAQPLLApgdgpIVLVLAPTRELAVQIQTECTKFGRSSRIRntcvYGGVPRGPQI---RDLIRGVEICIATPGRLLDML- 257
                 69*********77777777776544488999************************9986654443333344433...45899****************. PP

                 .......HHHTTT-SEEEEETGGGTTS....TTTHHHHHT---.SEEEEEESS- CS
      ResIII 120 eeeeeseellrdrfdviiiDEaHrlgak...kswreilekfke.avllglTATp 169
                     + ++    r  +++ DEa r+ ++    ++r+i++++++    l ++AT 
  EPX71090.1 258 ----DANKTNLRRVTYLVLDEADRMLDMgfePQIRKIVDQIRPdRQTLMFSATW 307
                 ....88999999999************97766*****9999775888******6 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.0    0.0014       5.1       1     115 [.     146     280 ..     146     303 .. 0.55
   2 ?    4.1   0.0     0.015        54      36      75 ..     360     399 ..     339     498 .. 0.80

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0014
      AAA_19   1 qreave.alkekvllvtaGpGtGKTrv..lkhivallvelggvkp...eeillvaftgrAakelrerlaalgae..........atTiHrlal...... 77 
                 q++a   a++ + ++ +   G+GKT +  l +iv++  +   ++p     +l++a+t+  a +++++++++g++                  +      
  EPX71090.1 146 QQQAWPmAMSGRDMVGISATGSGKTLTycLPAIVHINAQPL-LAPgdgPIVLVLAPTRELAVQIQTECTKFGRSsrirntcvygG-------Vprgpqi 236
                 66676557777778888899****86532444444444433.333454678999*****99999999977777666633333330.......2555555 PP

      AAA_19  78 ..........ldfddlltealelle.eaeeekklqeeellivDEfq.dvd 115
                           +++ ++      ll+   +++++l++ ++l+ DE+  ++d
  EPX71090.1 237 rdlirgveicIATPGR------LLDmLDANKTNLRRVTYLVLDEADrMLD 280
                 5555333332222222......2222123455665666888888752444 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.015
      AAA_19  36 elggvkpeeillvaftgrAakelrerlaalgaeatTiHrl 75 
                 e+ +  ++++l+ + t+r a+ ++  l++ g +a  iH+ 
  EPX71090.1 360 EILKDRVNKVLIFTGTKRVADDITRFLRQDGWPALAIHGD 399
                 45556679*******************999999****965 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   6.8e-05      0.24       6     100 ..     146     278 ..     142     303 .. 0.66
   2 ?   -3.7   0.0       2.3   8.3e+03      39      63 ..     359     383 ..     354     402 .. 0.60

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 6.8e-05
      AAA_30   6 QaaavealltsgdrvavltGpAGtGKttalkalreaweaag........grviglAptgkaAkvLaeelg..ieastiakllkrlk............. 81 
                 Q++a   +++++d  +v   + G+GKt +    + ++ +a+          v++lApt + A ++++e+    ++s+i +     +             
  EPX71090.1 146 QQQAWPMAMSGRD--MVGISATGSGKTLTYCLPAIVHINAQpllapgdgPIVLVLAPTRELAVQIQTECTkfGRSSRIRNTCVYGGvprgpqirdlirg 242
                 7777766666665..7777889****976544444444443357888868889*************766532255555555533335666666666666 PP

      AAA_30  82 .................grarlepgtllivDEagmv 100
                                  ++++l++ t l+ DEa  +
  EPX71090.1 243 veiciatpgrlldmldaNKTNLRRVTYLVLDEADRM 278
                 667777777777777786688888899999999633 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 2.3
      AAA_30  39 reaweaaggrviglAptgkaAkvLa 63 
                 +e+++++  +v++++ t+++A++++
  EPX71090.1 359 EEILKDRVNKVLIFTGTKRVADDIT 383
                 5556666566677777777766654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (552 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       482  (0.0268838); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 3835.38
//
Query:       EPX71091.1  [L=506]
Description: TENA/THI family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.3e-75  252.0   0.4    7.2e-75  251.5   0.4    1.2  1  Phos_pyr_kin  Phosphomethylpyrimidine kinase
    5.1e-29  101.6   0.1    7.8e-29  101.0   0.1    1.3  1  TENA_THI-4    TENA/THI-4/PQQC family
     0.0033   16.8   0.3      0.033   13.5   0.0    2.3  2  PfkB          pfkB family carbohydrate kinase


Domain annotation for each model (and alignments):
>> Phos_pyr_kin  Phosphomethylpyrimidine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  251.5   0.4   1.2e-78   7.2e-75       1     245 [.      12     275 ..      12     276 .. 0.97

  Alignments for each domain:
  == domain 1  score: 251.5 bits;  conditional E-value: 1.2e-78
                   ETTSSSHHHHHHHHHHHTTEEEEEEEEEEEEEETTCEEEEEE--HHHHHHHHHHHHHTS--SEEEE-S--SHHHHHHHHHHHHHTTS.SEEEE---S CS
  Phos_pyr_kin   1 DssGGAGiqADlktfsalgvygmsvitaltaqntkgvkevhplpaelveaqleavledvkvdavKiGmlasaeiievvaeklkkykv.pvVlDPVmv 96 
                   D+sGGAGiqADlk+f+a++vygms+ita+t qnt gv++vh +pa +ve+q++a++ dvk++++K+Gml+  +i++v  + +++yk+ +vV+DP ++
    EPX71091.1  12 DCSGGAGIQADLKVFTAHSVYGMSAITAITSQNTIGVNGVHLIPAPFVEKQIDACMLDVKCNVMKTGMLFIPAILKVTLDMIDRYKLkTVVVDPLIA 108
                   9************************************************************************************************ PP

                   SCTSSSBSSHHHHHHHHHHTGGG-SEEE-BHHHHHHHHT......---SSHHHHHHHHHHHHHTT-SEEEEEEGGS-S............SSEEEEE CS
  Phos_pyr_kin  97 aksgselleeeavealkeeLlplatvitPNlpEaeaLlg......ekikteedmkeaakkllklgakaVlikGghleg............eeavvtd 175
                   +++g  l+ + ++e++ +eL+p+at++tPN++Ea+ Ll+       +i++++d+k+ + kl++ g+k+++i++  ++              ++++++
    EPX71091.1 109 TRKGVLLVLPGYLELFIKELIPRATILTPNIAEASILLKhmtqetIEIHHVDDVKTLGAKLIASGCKNIIIRCDGISFdneffvckdsltPSSWYVY 205
                   ***********************************888877767777889***********************99866789********99999*** PP

                   EEETSSEEEEEEEE----S--BTHHHHHHHHHHHHHHCTSSHHHHHHHHHHHHHHHHHCG-BSTSSS-B- CS
  Phos_pyr_kin 176 vlydgeeveeleaerietknthGtGCtlssaiaaelakgesleeAvkkAkeyvteaikealelgkgagpv 245
                   vl+++e    +++++++tk ++Gt+C+lssaiaa+la+++++++Avk++ +y+++a++++++lg+ga+++
    EPX71091.1 206 VLCTSEVQLVIPQKWLSTKIAKGTSCALSSAIAANLANEMDVQTAVKRSVAYTQHALEYSFHLGRGANSL 275
                   ******************************************************************9875 PP

>> TENA_THI-4  TENA/THI-4/PQQC family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.0   0.1   1.3e-32   7.8e-29       1     202 [.     298     493 ..     298     501 .. 0.96

  Alignments for each domain:
  == domain 1  score: 101.0 bits;  conditional E-value: 1.3e-32
                 HHHCHHHHHHHHCSHHHHHHHTT-S-HHHHHHHHHHHHHHHHHHHHHHHHHHHC-SSHHHHHHHHHHHHHHHHCHHHHHHHHHHHTT-HHHHHCTTT-- CS
  TENA_THI-4   1 haqlrpiwkeyinHpFvkalakGtlpreqfqayviqdylylknfvrvlaiilskssdlevrrelesrivdhdgeeielhlrlaealGlsreelsktkps 99 
                 h+ l + w+++++H F ++ ++ tl  + f++y++ +y++l n++++ ++++++ss+++v+ e +++i+++++ee+  hl++++++Gl +e++  +kp 
  EPX71091.1 298 HPHLSQTWNFLFEHHFLQKFKNTTLAIDEFKKYLALKYHMLMNNAQAAGLTAFSSSNIAVI-ERSANIIQIIKEENVIHLQICKQYGLAPEQFVDRKPA 395
                 678999*******************************************************.************************************9 PP

                 HHHHHHHHHHHHHHCHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHS-TSCHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHH CS
  TENA_THI-4 100 patkayvrylldlarrgslaeavaallpclfvyqeiaerlkeklralegpeyyewvkeyaseefraaveeakrllerllakvsdeqleelqeiflkale 198
                   + a+++++ d+++r  ++ +++a+lp+ +  q i+++++    +l++  ++++v +++++   ++++ + r le    ++ +e++++l +i++++  
  EPX71091.1 396 -FVNAHSSFINDVGQREGVLGIQVAMLPFSIILQDIFSKMD----ILDSGAFKPFVLHCKDSVTIEHINGLLRNLESEASTLVPEKIQQLLNILEQSIS 489
                 .9************************************999....677888************************************************ PP

                 HHHH CS
  TENA_THI-4 199 fets 202
                 fe  
  EPX71091.1 490 FEMA 493
                 *986 PP

>> PfkB  pfkB family carbohydrate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.0   5.5e-06     0.033     177     226 ..     125     180 ..      93     183 .. 0.87
   2 ?    0.8   0.1     0.042   2.5e+02     262     286 ..     234     258 ..     232     265 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 5.5e-06
                 HHHHHCTESEEEEEHHHHHHHHTSCT......HSHHHHHHHHHHHHHTTSSEEEEE CS
        PfkB 177 llellaladllkpneeElealtgekl......edieealaalhklkakgaktvvvt 226
                 ++el++ a++l+pn +E+++l+++          +++++ ++ kl+a+g k++++ 
  EPX71091.1 125 IKELIPRATILTPNIAEASILLKHMTqetieiHHVDDVKTLGAKLIASGCKNIIIR 180
                 799*******************9998888899999999999999999999999986 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.042
                 HHHHHHHHHTTHHHHHHHHHHHHHH CS
        PfkB 262 vggflaallegksleealrfanavA 286
                  ++++a+l++++++++a+++ +a  
  EPX71091.1 234 SSAIAANLANEMDVQTAVKRSVAYT 258
                 689****************998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (506 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       628  (0.0350271); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.61u 0.33s 00:00:00.94 Elapsed: 00:00:00.53
# Mc/sec: 2854.88
//
Query:       EPX71092.1  [L=554]
Description: TENA/THI family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.7e-80  268.5   0.6    7.1e-80  267.9   0.6    1.2  1  Phos_pyr_kin  Phosphomethylpyrimidine kinase
      4e-54  183.6   0.7    6.5e-54  182.9   0.7    1.3  1  TENA_THI-4    TENA/THI-4/PQQC family
    2.9e-05   23.6   4.1    0.00029   20.3   0.0    2.5  3  HK            Hydroxyethylthiazole kinase family
  ------ inclusion threshold ------
      0.049   13.1   0.5        1.3    8.5   0.0    2.2  2  Carb_kinase   Carbohydrate kinase
      0.091   12.1   0.0       0.37   10.0   0.0    1.9  2  PfkB          pfkB family carbohydrate kinase


Domain annotation for each model (and alignments):
>> Phos_pyr_kin  Phosphomethylpyrimidine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  267.9   0.6     2e-83   7.1e-80       1     239 [.      45     304 ..      45     309 .. 0.96

  Alignments for each domain:
  == domain 1  score: 267.9 bits;  conditional E-value: 2e-83
                   ETTSSSHHHHHHHHHHHTTEEEEEEEEEEEEEETTCEEEEEE--HHHHHHHHHHHHHTS--SEEEE-S--SHHHHHHHHHHHHHTTS.SEEEE---S CS
  Phos_pyr_kin   1 DssGGAGiqADlktfsalgvygmsvitaltaqntkgvkevhplpaelveaqleavledvkvdavKiGmlasaeiievvaeklkkykv.pvVlDPVmv 96 
                   D+sGGAGiqADlkt+++lgvygms+i++++a n + v++v++++a++ve+q++ +l+dv++++vK+Gml++ ei+++v++ + k+++ +v++DPVm+
    EPX71092.1  45 DCSGGAGIQADLKTMTSLGVYGMSAISCVVAENAERVDKVENMSASFVESQIDCCLQDVPCNVVKTGMLSNVEIVQAVVKSVVKHNIkEVIVDPVMI 141
                   9*********************************************************************************999999********* PP

                   SCTSSSBSSHHHHHHHHHHTGGG-SEEE-BHHHHHHHHT......---SSHHHHHHHHHHHHHTT-SEEEEEEGGS-S..............SSEEE CS
  Phos_pyr_kin  97 aksgselleeeavealkeeLlplatvitPNlpEaeaLlg......ekikteedmkeaakkllklgakaVlikGghleg..............eeavv 173
                   a+sg++l +e+ ve++ + Llp +t+itPN+pEa a+++       ++++ ++m++ a+ +++ ga++Vl+kGgh++                e +v
    EPX71092.1 142 ATSGDSLSNEDIVETIIKYLLPVTTLITPNIPEALAFAKrvngdvPEVNSISSMEKLASLIHSFGARYVLLKGGHMPLnqlglkatkeeqgeLELQV 238
                   ***********************************99998888888899**************************96678*******9999866678 PP

                   EEEEETSSEEEEEEEE----S--BTHHHHHHHHHHHHHHCTSSHHHHHHHHHHHHHHHHHCG-BST CS
  Phos_pyr_kin 174 tdvlydgeeveeleaerietknthGtGCtlssaiaaelakgesleeAvkkAkeyvteaikealelg 239
                   +d+lydg++++++++ ++++ + hGtGCtlssaia+ la  +++ ++v+ A +yv+ ai+++ +++
    EPX71092.1 239 VDILYDGKKYYHFSSTYLNQGEVHGTGCTLSSAIASFLAWDHTMLDSVQFAIDYVHGAISQSPSIN 304
                   9***********************************************************988775 PP

>> TENA_THI-4  TENA/THI-4/PQQC family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  182.9   0.7   1.8e-57   6.5e-54       1     208 [.     334     540 ..     334     542 .. 0.96

  Alignments for each domain:
  == domain 1  score: 182.9 bits;  conditional E-value: 1.8e-57
                 HHHCHHHHHHHHCSHHHHHHHTT-S-HHHHHHHHHHHHHHHHHHHHHHHHHHHC-SSHHHHHHHHHHHHHHHHCHHHHHHHHHHHTT-HHHHHCTTT-- CS
  TENA_THI-4   1 haqlrpiwkeyinHpFvkalakGtlpreqfqayviqdylylknfvrvlaiilskssdlevrrelesrivdhdgeeielhlrlaealGlsreelsktkps 99 
                 h+++ p wkey  H+F+++lakG+lp   fq y++qdylyl +f r+++++++k+s++  +   +++ v h+ +e +lh+++++++G++ e+l+++++s
  EPX71092.1 334 HPSVVPVWKEYNYHKFTNMLAKGNLPLRAFQEYLKQDYLYLLQFSRAYSLKGYKESTFLGI-FEAAQSVFHVIQEKQLHVSFCQQYGITIEDLKASEES 431
                 78999*****999************************************************.888999******************************* PP

                 HHHHHHHHHHHHHHCHS-HHHHHHHHHHHHHHHHHHH.HHHCCHHHS-TSCHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHH CS
  TENA_THI-4 100 patkayvrylldlarrgslaeavaallpclfvyqeia.erlkeklralegpeyyewvkeyaseefraaveeakrllerllakvsdeqleelqeiflkal 197
                 pa++ay+ry+ld++++++la++ +a+ pcl++y+ ia + +ke++r+ +gp y++w+++y se++ +av++++r+le+ + ++s+e++++l ++f++a+
  EPX71092.1 432 PACTAYSRYILDTGSQQDLAALEFAQAPCLIGYYLIAlRLMKEPFRDVNGP-YQRWIDNYVSEDYISAVRRGCRQLEETVCTLSPERIQQLIQVFVRAT 529
                 ***********************************99999******66666.*********************************************** PP

                 HHHHHHHHHHH CS
  TENA_THI-4 198 efetsfltmal 208
                 +fe+ f+ + +
  EPX71092.1 530 KFEILFWETPY 540
                 *******6544 PP

>> HK  Hydroxyethylthiazole kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.68   2.4e+03     182     238 ..      40      97 ..      26     104 .. 0.65
   2 !    3.8   0.4    0.0087        31      54     139 ..     107     197 ..     103     212 .. 0.66
   3 !   20.3   0.0   8.2e-08   0.00029     161     213 ..     239     291 ..     236     316 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.68
                 GSTTHHHHHHHHHHHHHTTBSSHHHHHHHHHHHHHHHH..HHHHHHHTTHHHHHHHHH CS
          HK 182 kitasGCllgsvvaaflavkkdkllaaveavllykvAg.keaaarsegsgsFqvelld 238
                  + +s C+ g+ + a l   +      ++a+++      +++ + ++ s+sF+ + +d
  EPX71092.1  40 TVAGSDCSGGAGIQADLKTMTSLGVYGMSAISCVVAENaERVDKVENMSASFVESQID 97 
                 5778888888888887777665555555555544333313444445555888777666 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.0087
                 EEE-TT--HHHHHHHHHHHHHHHHTT.--EEEE-TTBTTB...HHHHHHHHHHHHHS-..-SEEEEEHHHHHHHHTSS.CCSCSSSSSS-SHH CS
          HK  54 llNiGtleekaiealkaAvksakevn.rPvvlDPVgvgAt...elRrelalellkevk..lavikGNasEilslagle.lkvkGvDskeaata 139
                 ++ +G l++  +e+++a vks  ++n + v++DPV ++ +      ++++++++k+    + +i  N  E l+ a+   + v  v s ++ ++
  EPX71092.1 107 VVKTGMLSN--VEIVQAVVKSVVKHNiKEVIVDPVMIATSgdsLSNEDIVETIIKYLLpvTTLITPNIPEALAFAKRVnGDVPEVNSISSMEK 197
                 678999999..9999999999877762679****96543311034556777777776411467778888877777654366666666666555 PP

  == domain 3  score: 20.3 bits;  conditional E-value: 8.2e-08
                 SEEEEESSEEEEEE-S-GGGGGSTTHHHHHHHHHHHHHTTBSSHHHHHHHHHH CS
          HK 161 vDvvsdgkkvyklknGtellgkitasGCllgsvvaaflavkkdkllaaveavl 213
                 vD++ dgkk y+ ++     g++ ++GC+l+s++a+fla  +  l+++  a+ 
  EPX71092.1 239 VDILYDGKKYYHFSSTYLNQGEVHGTGCTLSSAIASFLAWDHTMLDSVQFAID 291
                 799************99999********************9998888765554 PP

>> Carb_kinase  Carbohydrate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.2     0.022        80       4     164 ..      41     216 ..      38     226 .. 0.62
   2 ?    8.5   0.0   0.00035       1.3     187     224 ..     262     300 ..     241     316 .. 0.83

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.022
                  EE-BTTCHHHHHHHHHHHHCT.T.-SEEEEEESSTTTCCCCTTTTTCEECCTTHTTTS...--SSS-SEEEE-TT-SSSHCHHHHCHHHCCCCS-.EE CS
  Carb_kinase   4 igGsedytGAallaalaalrl.g.aglvsvateseaiavlksylpevivhplledeqakileklerldavviGpGLgrdekikklleevlekdep.lv 98 
                  ++Gs+   GA++ a l ++ + g  g+  + +   + a+   +++++ ++ ++ ++    l++    ++v  G+ L + e ++++++ v +++   ++
   EPX71092.1  41 VAGSDCSGGAGIQADLKTMTSlGvYGMSAISCVVAENAERVDKVENMSASFVE-SQIDCCLQDV-PCNVVKTGM-LSNVEIVQAVVKSVVKHNIKeVI 135
                  67888888888888887776523578888888666666666666666655555.3333233333.444444444.55555556666666555444477 PP

                  EE.......GGGGGSGGGG.......TTTTSSEEEE--HHHHHHHCTTTCH......HCCSHHHHHHHHHHHHTTEEEEESTT CS
  Carb_kinase  99 iD.......AdgLnllaqkne....lserkaeviLTPhkkEfkrLlkaivk......keddrlelarelaqklnavvllkgek 164
                  +D       +d L   +        +      + +TP++ E    +k + +      + ++  +la+ +       vllkg +
   EPX71092.1 136 VDpvmiatsGDSLSNEDI--VetiiKYLLPVTTLITPNIPEALAFAKRVNGdvpevnSISSMEKLASLIHSFGARYVLLKGGH 216
                  773333333344444333..145766667778899999999988888887777777666777778888888888888888865 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.00035
                  TTHHHHHHHHHHHHHHCTSSHHHHHHHH.HHHHHHHHHH CS
  Carb_kinase 187 GGsGDvLaGligalLaqneasyeaaiaa.awlhgaasde 224
                   G+G +L+ +i+++La+ +++++++  a  ++hga+s+ 
   EPX71092.1 262 HGTGCTLSSAIASFLAWDHTMLDSVQFAiDYVHGAISQS 300
                  59*****************99998865526899999875 PP

>> PfkB  pfkB family carbohydrate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0    0.0001      0.37     156     225 ..     129     212 ..     112     218 .. 0.74
   2 ?   -1.5   0.0      0.33   1.2e+03     234     282 ..     242     289 ..     231     294 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.0001
                 HHTTE..EEEEECESSSHH......HHHHHHHHHCTESEEEEEHHHHHHHHTSCT......HSHHHHHHHHHHHHHTTSSEEEE CS
        PfkB 156 knggt..fdpnlldplgaq......fkeallellaladllkpneeElealtgekl......edieealaalhklkakgaktvvv 225
                 +n +   +dp++ +++g++      +   ++ ll+ ++l++pn  E+ a++++ +      ++i +  +++  +++ ga+ v+ 
  EPX71092.1 129 HNIKEviVDPVMIATSGDSlsnediVETIIKYLLPVTTLITPNIPEALAFAKRVNgdvpevNSISSMEKLASLIHSFGARYVLL 212
                 3444466899999999998999996666677777******************99977777755555555554444566666655 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.33
                 EEETTEEEEEEE.SSSS-SBGTTHHHHHHHHHHHHHHTTHHHHHHHHHH CS
        PfkB 234 vvekdgelkvpavpkvkvvDttGAGDsfvggflaallegksleealrfa 282
                 ++++++ +++++ +  ++  + G+G +  +++++ l+  +++ ++++fa
  EPX71092.1 242 LYDGKKYYHFSSTY-LNQGEVHGTGCTLSSAIASFLAWDHTMLDSVQFA 289
                 45577788888854.88999999999*********************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (554 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       446  (0.0248759); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.69u 0.29s 00:00:00.98 Elapsed: 00:00:00.52
# Mc/sec: 3213.06
//
Query:       EPX71093.1  [L=1017]
Description: FACT complex component Spt16 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      1e-55  188.1   0.2      1e-55  188.1   0.2    2.2  2  SPT16            FACT complex subunit (SPT16/CDC68)
    5.9e-54  182.2   0.2    1.6e-53  180.8   0.2    1.8  1  FACT-Spt16_Nlob  FACT complex subunit SPT16 N-terminal lobe d
    4.6e-30  104.9   0.0      9e-30  103.9   0.0    1.5  1  Peptidase_M24    Metallopeptidase family M24
      2e-17   63.4   0.1    6.5e-17   61.7   0.1    2.0  1  Rtt106           Histone chaperone Rttp106-like


Domain annotation for each model (and alignments):
>> SPT16  FACT complex subunit (SPT16/CDC68)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.6   0.7         4   1.8e+04      97     117 ..     474     495 ..     467     501 .. 0.50
   2 !  188.1   0.2   2.3e-59     1e-55       1     151 []     539     689 ..     539     689 .. 0.99

  Alignments for each domain:
  == domain 1  score: -4.6 bits;  conditional E-value: 4
       SPT16  97 reae.kkekedlveqekLilsk 117
                 re + ++ek+   +q++L   k
  EPX71093.1 474 REVDdSAEKRRTEHQKQLAARK 495
                 4333033555555566665444 PP

  == domain 2  score: 188.1 bits;  conditional E-value: 2.3e-59
       SPT16   1 iyvdkkketillPifGiavPFhistiknvskseegdytylrinFnvpgsavgkkeealfknpeaifikeltfrskdekklqevfreikelkkkvkkrea 99 
                 i vd k+++i+lPifG++vPFhis++knvsk++eg+ +ylr+nF +pg+  gkk+e++f+ p+a+fi++ tfrs+d+++++++f++i+++kk+++krea
  EPX71093.1 539 ILVDYKAQSIILPIFGRPVPFHISSLKNVSKNDEGSLVYLRLNFLSPGQIGGKKDEQPFEDPNAQFIRSFTFRSSDNSRMNQIFKDIQDMKKAATKREA 637
                 89*********************************************************99************************************** PP

       SPT16 100 ekkekedlveqekLilskskrkprLkdlyirpniegkklaGtleaheNGlRy 151
                 ekke +d+veqe+Li+ k++r+++L+d+y+rp+++gk+l G +e+h+NG+Ry
  EPX71093.1 638 EKKEFADVVEQENLIEIKNRRPIHLNDVYVRPALDGKRLPGFVEIHQNGIRY 689
                 ***************************************************9 PP

>> FACT-Spt16_Nlob  FACT complex subunit SPT16 N-terminal lobe domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  180.8   0.2   3.6e-57   1.6e-53       1     160 [.       6     167 ..       6     168 .. 0.96

  Alignments for each domain:
  == domain 1  score: 180.8 bits;  conditional E-value: 3.6e-57
                      --HHHHHHHHHHHHHHHHSHHHHH..STT-SEEEEEE-S--TT----HHHHHHHHHHSS--SSEEEEEESSEEEEEEEHHHHHTTGGGCTSTT- CS
  FACT-Spt16_Nlob   1 idkkafkkRlkklysawkeeeedk..fssvdallvvlGksdeenpykKstalqtWLlGyefpdtlilltkkkiviltskkKaklLeplkekkee 92 
                      id++ f+kRl++l+s+wk+ ++ +  f++++++lvv+G++d  npy+Ks a++tWLlGyefp+tl+l+ k++i++lts++Ka +L++l+e+++ 
       EPX71093.1   6 IDSNVFHKRLNTLISSWKDASDANelFQGCESILVVIGTADVPNPYQKSAAMHTWLLGYEFPSTLMLVEKERITFLTSNTKAGMLTQLSEAEN- 98 
                      89****************55555556****************************************************************996. PP

                      .SSEEEEEEE-S-HHHHHHHHHHHHHHHHTTTSEEEE-TT----SHHHHHHHHHHCCCGGG.EEEE-HH CS
  FACT-Spt16_Nlob  93 ekvevellvreKdadenkknfeklieaikeagkkvGvlaKdkseGkfveewkkalkeakke.eevDvsa 160
                      +  ev++l+r+Kd++en+++fe++++ +++++kk+G+++Kd ++Gkfv+ew+++++  k+e e vD s 
       EPX71093.1  99 KAAEVDILKRTKDPAENRALFEEIVKRVRASNKKIGIFPKDVNQGKFVNEWNEVFEPVKSEfEMVDASM 167
                      59*********************************************************999****986 PP

>> Peptidase_M24  Metallopeptidase family M24
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.9   0.0     2e-33     9e-30       3     208 ..     184     418 ..     182     419 .. 0.80

  Alignments for each domain:
  == domain 1  score: 103.9 bits;  conditional E-value: 2e-33
                    HHHHHHHHHHHHHHH.HHHHHTTC......BHHHHHHHHHHHHHHHTT................TCEESSSSEEEEGGGGGSTTT.BCSSSB--TT CS
  Peptidase_M24   3 irkaariasaaleav.leaikpgv......terelaaeieattlkrhg................arglafppivasgenaavlhy.tpndrvlkeg 74 
                    ++ a+r++ a +++  ++++ ++v      t+ + a+ +e+   ++++                + ++++ pi++sg  +++    + +dr l+ g
     EPX71093.1 184 VKDASRVSVASMTKYfADELSRFVdqgvrtTHSKFAERLERL--IDNEsffqkkdvrlgdidteQIEWCYTPIIQSGGQYDLKPSaITDDRNLH-G 276
                    678889999988877346666543333355677777777744..44444555556777788888*****************7666588999995.6 PP

                    EEEEEEEEEEETTEEEEEEEEEECSSGSHHHHHHHHHHHHHHHHHHHC-STTSBHHHHHHHHHHHHHHT..TBCCGBSSCSEEEESSSSSEEEEEE CS
  Peptidase_M24  75 dlvlidagaeydgyasDitrTvlvGkftpeqrelyeavleaqeaaikavkpGvtlseidaaarevlesa..glakffphglGHgvGlevhdegpsv 168
                    d+v++ +g++y+ y+s+i+rT+l++ ++peq+++y ++ + q ++i+ ++ G+ +++i+ ++  +++s+  +l+ +f ++lG g+G+e+++++  v
     EPX71093.1 277 DVVICSLGIRYKSYCSNIGRTYLFD-PSPEQQKNYSFLAALQGKLIDSCRDGAVIKDIYTKILGFIRSKrpELEGHFVKNLGAGIGIEFRESSLLV 371
                    ************************6.999**************************************9778789999*************994446 PP

                    SSSTTCSSB--TTBEEEEEEEEE...EET.......TTEEEEEBEEEEEE CS
  Peptidase_M24 169 sresndgrkleeGmvftiEpgiy...fap.......geggvriedtvlvt 208
                    +  ++++r+l++Gm++++  g+    + p        e++  + dt+ vt
     EPX71093.1 372 N--AKNTRTLKAGMTMNLSIGFAnlvN-PkpknshpKEYSLLLVDTIQVT 418
                    6..678**************9985441.1333333355677777777776 PP

>> Rtt106  Histone chaperone Rttp106-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.7   0.1   1.4e-20   6.5e-17       2      88 ..     814     900 ..     813     901 .. 0.95

  Alignments for each domain:
  == domain 1  score: 61.7 bits;  conditional E-value: 1.4e-20
      Rtt106   2 gVkasrkakeGlLyflekgllfgfkkPllfiplediesvsfeRvsvtsrtfdlvvelkk...eeveFsmidqeelegidefvkskgikik 88 
                 gV+++   +++lL++++++l+ +++ P+++++l++ie++++eRv++  ++fdlv+ +++    +v++++i++e+l++++e+++s++i ++
  EPX71093.1 814 GVPFR---SNVLLQPTTDCLVQLTDTPFTVVTLSEIEIAHLERVQFGLKNFDLVFIFQNfhrPPVHINTIPMEQLDNVKEWLDSCDICYS 900
                 57777...89***********************************************88998*************************886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1017 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1378  (0.0768587); expected 358.6 (0.02)
Passed bias filter:                      656  (0.0365888); expected 358.6 (0.02)
Passed Vit filter:                        77  (0.00429472); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.90u 0.31s 00:00:01.21 Elapsed: 00:00:00.48
# Mc/sec: 6397.96
//
Query:       EPX71094.1  [L=615]
Description: RNA methyltransferase Nop2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.2e-74  249.4   0.0    3.9e-74  248.6   0.0    1.4  1  Methyltr_RsmB-F  16S rRNA methyltransferase RsmB/F
    4.4e-09   36.7   0.0    1.3e-08   35.2   0.0    1.9  1  Methyltr_RsmF_N  N-terminal domain of 16S rRNA methyltransfer
    0.00082   19.2   0.0     0.0017   18.2   0.0    1.4  1  Met_10           Met-10+ like-protein


Domain annotation for each model (and alignments):
>> Methyltr_RsmB-F  16S rRNA methyltransferase RsmB/F
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  248.6   0.0   6.6e-78   3.9e-74       1     200 []     337     547 ..     337     547 .. 0.94

  Alignments for each domain:
  == domain 1  score: 248.6 bits;  conditional E-value: 6.6e-78
                      HHHH---TT-EEEESS-TTSHHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CTCCHHHHCC..EEEEEEEE--CCGGG CS
  Methyltr_RsmB-F   1 allLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlggelfDriLlDaPCsgtgv 94 
                      +++Lapq++e+ilD+++aPGgK t++a+l kn+g+++A+dank R+k++++n++rLgv+n+iv+++D+rk+++++ g  fDr++lDaPCsgtgv
       EPX71094.1 337 VMALAPQPNERILDMSSAPGGKITYVAALQKNTGVIFANDANKARTKALTANIHRLGVRNAIVCNYDGRKFPNDVLG-GFDRVMLDAPCSGTGV 429
                      589********************************************************************998876.7*************** PP

                      TTT-TCHHHH--HHHHHHHHHHHHHHHHHHCCCE....EEEEEEEEEES--STTTTHHHHHHHHHH-TTEEEESSBSTTSTTSSECEEC..... CS
  Methyltr_RsmB-F  95 irrdpdvklrrkekdiaqlaklqkellsaaidll....kkgGvlvYsTCsvlveEneevieeaLkkredvelvetelsepkglklgeea..... 179
                      i +d++vk++++e+d+ +l++lq++ll +aid++    k+gG++vYsTCs++veE+e+vi++aLkkr++v+lv+t l+ +++            
       EPX71094.1 430 IYKDQSVKTNKSERDFDTLSHLQRQLLLSAIDSVdadsKTGGYIVYSTCSITVEEDEAVIQYALKKRPNVKLVSTGLEFGRE------Gfvrfr 517
                      ***************************************************************************6654433......333333 PP

                      .........TSEEE-TTTTSS-SEEEEEEE CS
  Methyltr_RsmB-F 180 .........gtlrllPhtenkdgffiaklk 200
                                t+r++Ph +n dgff+aklk
       EPX71094.1 518 ekrfhpsmkLTRRYYPHVHNIDGFFVAKLK 547
                      4679999999******************96 PP

>> Methyltr_RsmF_N  N-terminal domain of 16S rRNA methyltransferase RsmF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.2   0.0   2.2e-12   1.3e-08      11      89 ..     250     333 ..     242     334 .. 0.87

  Alignments for each domain:
  == domain 1  score: 35.2 bits;  conditional E-value: 2.2e-12
                      HHHGG.GHHHHHHHHH-----EEE--TTS..TTHHHHHHH..-SS--B-.TT-TTEEES---....TTSHHHHTTS-EE--TTT CS
  Methyltr_RsmF_N  11 ellge.eaeaflaaleeprkkglRvNtlKisveeleklse..efelepv.pwceeGfyleeeerp.gkhplheaGlyYiQEpSa 89 
                      el++  ea +f+++ e pr++ +R+NtlK++++el+++    +++lep+  w++ G  + e++ p g +p++ aG y +Q +S+
       EPX71094.1 250 ELFPVsEAIEFFESNELPRPVTIRTNTLKTQRRELAQALInrGVNLEPIgKWSKVGLQVFESQVPiGATPEYLAGHYILQAASS 333
                      555555999***********************99998554479******77******999988778*****************8 PP

>> Met_10  Met-10+ like-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   2.8e-07    0.0017      98     179 ..     342     425 ..     336     443 .. 0.83

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 2.8e-07
                 --TT-EEEETT.-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG---..TT-EEEEEE--TTT CS
      Met_10  98 veegevVvdvf.AGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkvekvvkpileDgrevir..eqladrvvmnlpks 179
                  +++e+++d+  A  G+ + ++a   +   ++a+d n +  k l+ ni++  v + + + + Dgr++ +     +drv++++p s
  EPX71094.1 342 PQPNERILDMSsAPGGKITYVAALQKNTGVIFANDANKARTKALTANIHRLGVRNAI-VCNYDGRKFPNdvLGGFDRVMLDAPCS 425
                 689*******73566788888888789999***************************.99*******985445689999988866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (615 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1301  (0.072564); expected 358.6 (0.02)
Passed bias filter:                      512  (0.0285571); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.69u 0.33s 00:00:01.02 Elapsed: 00:00:00.47
# Mc/sec: 3916.37
//
Query:       EPX71095.1  [L=1342]
Description: leptomycin efflux transporter Pmd1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     2e-108  362.2  36.3    2.2e-55  188.3  11.8    2.2  2  ABC_membrane  ABC transporter transmembrane region
    3.2e-67  225.3   0.0    5.3e-33  114.4   0.0    2.6  2  ABC_tran      ABC transporter
    3.3e-12   46.3   6.2    3.6e-05   23.3   0.1    4.2  4  SMC_N         RecF/RecN/SMC N terminal domain
    4.4e-07   29.5   1.4     0.0064   16.2   0.2    2.6  2  AAA_29        P-loop containing region of AAA domain
    6.4e-07   28.5   1.6     0.0026   16.6   0.0    3.2  3  ABC_ATPase    Predicted ATPase of the ABC class
    1.8e-06   28.0   0.0      0.043   13.7   0.0    2.7  2  RsgA_GTPase   RsgA GTPase
    8.5e-06   25.8   0.1      0.072   12.9   0.0    3.8  4  AAA_21        AAA domain, putative AbiEii toxin, Type IV TA s
    9.5e-05   22.2   0.7       0.77    9.4   0.0    3.6  3  AAA_30        AAA domain
    0.00017   22.1   0.9       0.85   10.0   0.5    3.3  2  AAA_16        AAA ATPase domain
    0.00019   21.3   0.0       0.64    9.7   0.0    2.5  2  AAA_15        AAA ATPase domain
    0.00031   21.0   2.3          2    8.7   0.4    3.9  2  AAA_22        AAA domain
    0.00077   20.0   0.0        0.4   11.1   0.0    2.5  2  AAA_23        AAA domain
    0.00089   18.9   0.9       0.67    9.5   0.0    3.1  3  AAA_25        AAA domain
     0.0015   17.8   0.9          1    8.6   0.0    2.7  3  Zeta_toxin    Zeta toxin
      0.003   17.1   0.0          1    8.9   0.0    2.4  2  AAA_7         P-loop containing dynein motor region
  ------ inclusion threshold ------
      0.017   15.1   0.1        7.5    6.5   0.0    3.3  3  AAA_5         AAA domain (dynein-related subfamily)
      0.024   14.8   2.5         12    6.3   0.1    3.6  2  SbcCD_C       Putative exonuclease SbcCD, C subunit
      0.038   14.6   0.2         18    5.9   0.0    3.0  2  AAA_18        AAA domain
      0.045   12.9   0.0        5.2    6.1   0.0    2.4  2  G-alpha       G-protein alpha subunit
      0.054   13.7   1.0         13    5.9   0.1    2.6  2  AAA_33        AAA domain
      0.055   13.6   0.4        8.4    6.5   0.0    2.9  2  MMR_HSR1      50S ribosome-binding GTPase
      0.096   12.9   0.7        7.7    6.7   0.1    2.6  2  AAA_28        AAA domain
        0.1   11.7   0.3        8.1    5.5   0.0    2.4  2  NB-ARC        NB-ARC domain
       0.11   12.1   0.5         39    3.8   0.0    3.3  3  SRP54         SRP54-type protein, GTPase domain
       0.32   11.2   0.0       0.32   11.2   0.0    3.4  3  DPM3          Dolichol-phosphate mannosyltransferase subunit 


Domain annotation for each model (and alignments):
>> ABC_membrane  ABC transporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.3  11.8     3e-58   2.2e-55       2     273 ..      88     362 ..      87     363 .. 0.98
   2 !  179.9  16.5     1e-55   7.5e-53       3     271 ..     778    1047 ..     776    1049 .. 0.98

  Alignments for each domain:
  == domain 1  score: 188.3 bits;  conditional E-value: 3e-58
                   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSTCCHH.....HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTHHHHH CS
  ABC_membrane   2 iliillailagvlsplfplvlgrildtlldkgdpet.....ealnvysllllllglaqfilallqsyllnvtgerlskrlrrklfkkilrqpmsffd 93 
                   ++++l+ai ag+  p+ +l+ g++ ++++d+ + +      + +n++ l+++++++++f ++++++  ++v ger+s+++r+++++++l+q++++fd
    EPX71095.1  88 LIGCLTAIGAGLGLPFLALIAGKLSKVFTDYFSGQNvdnfqHSVNQFVLYFVYIAIGVFGCSFVYTVAFIVSGERISREIRKQYLHAVLSQNVGYFD 184
                   5899***************************55555568999******************************************************* PP

                   HSCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTH CS
  ABC_membrane  94 tnsvGellsrltndvsklrdglgeklglffqslltfvgglivmfylgwkltlvllailpliilvsaviakilkklkkkeqkavakassvaeEslsgi 190
                   +  +Ge+++r+t+d++ ++dglgek+gl++ s +tfv+g++++f+  wk+tl++ ++l+ i+  + +  + ++k++k +  +++ +ss++eE++s++
    EPX71095.1 185 HLGAGEITTRITSDTNYIQDGLGEKVGLVLSSASTFVSGFVIGFIRAWKFTLIISSMLLAILGGMTFGISYITKYSKPHIGQLSSSSSFVEEVFSNV 281
                   ************************************************************************************************* PP

                   HHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSTHHHHHHHHHHHHHHHHH CS
  ABC_membrane 191 rtVkafgreeyflekfekaleeakkagikkaianglligitqllgllsyalalwfGttlvisgelsvgdlvvflslfailfga 273
                   r   afg ++  +e + k l  ak+ g k+a++ g++ g+++++++  y la+w G+ l ++gel+v++   ++++fa+++ +
    EPX71095.1 282 RNALAFGTQRLLTESYAKFLSPAKRYGTKRALVMGVMTGWMFFVSYGYYGLAFWEGGRLLHAGELNVDK--LISCFFAVMTAS 362
                   *********************************************************************..*******99865 PP

  == domain 2  score: 179.9 bits;  conditional E-value: 1e-55
                    HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSTCCHH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTHHHHHH.. CS
  ABC_membrane    3 liillailagvlsplfplvlgrildtlldkgdpet.ealnvysllllllglaqfilallqsyllnvtgerlskrlrrklfkkilrqpmsffdt.. 94  
                    ++il+++++g+++p++++v + +++++   ++p++ +++n +++++l+l++a+f+   +++  +++++e +  r+rr +f  ++rq+++ffd+  
    EPX71095.1  778 VGILASMVCGAAYPVQAVVNAWYMNIFANVASPDYfHQVNTFAVYWLILAIAEFFGHSMSQIAMSYMSESILLRIRRHVFSVLIRQDIEFFDRse 872 
                    789**************************999999************************************************************ PP

                    SCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT CS
  ABC_membrane   95 nsvGellsrltndvsklrdglgeklglffqslltfvgglivmfylgwkltlvllailpliilvsaviakilkklkkkeqkavakassvaeEslsg 189 
                    nsvG+l++ l++ +++l+ ++g++lg+f+q ++++v++ i++++lgwkl+lv+la++p++i + +++   l +++++ ++a   + ++a Es s+
    EPX71095.1  873 NSVGTLTTSLSTSIQNLEGLTGTTLGTFMQIFTNIVSVSILSLILGWKLSLVILATSPVMIASGYYRVAALDRIQNNLSEACKASAAFACESTSA 967 
                    *********************************************************************************************** PP

                    HHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSTHHHHHHHHHHHHHHH CS
  ABC_membrane  190 irtVkafgreeyflekfekaleeakkagikkaianglligitqllgllsyalalwfGttlvisgelsvgdlvvflslfailf 271 
                    i+tV +++re++ +e+++ +l ++ k +  +  ++++l++++q++++l++ l +w+G+tlv +ge+++    +f++++ ++ 
    EPX71095.1  968 IKTVASLTRESKIYEHYCASLVQPGKETAFSSMVSAFLFAASQAVTFLVNGLGFWYGATLVRKGEYNLVH--FFTCYIGVVY 1047
                    **********************************************************************..9999998765 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.2   0.0     6e-34   4.3e-31       1     137 []     430     588 ..     430     588 .. 0.95
   2 !  114.4   0.0   7.4e-36   5.3e-33       1     137 []    1118    1268 ..    1118    1268 .. 0.86

  Alignments for each domain:
  == domain 1  score: 108.2 bits;  conditional E-value: 6e-34
                 EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH.................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.................... RF
    ABC_tran   1 lknvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren.................... 79 
                 l++ sl + +g+++a+vG +G+GKSt++ l+ + ++p +G++ ldg+d+ + ++ +lr++i+ ++qep lf  + v en                    
  EPX71095.1 430 LDDFSLLCPAGKITALVGASGSGKSTIIGLVERFYDPIAGQVMLDGEDIGDLNTAWLRSHISLVQQEPVLFAVS-VFENiafglidndlfkftedevre 527
                 6899999****************************************************************999.******************988888 PP

                 .....HHHTCHHHHHHHSTTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 .....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  80 .....esdeeiekalsklglkelkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137
                      ++++++++++ +l  k   dt+v++++  LSgGqkqr+a+ara++++pk+lllDE+t+
  EPX71095.1 528 rvfcaAKTANAYEFIMTLPEKF--DTNVGQQGFLLSGGQKQRIAIARAIISDPKILLLDEATS 588
                 8888877778999999999888..99999********************************96 PP

  == domain 2  score: 114.4 bits;  conditional E-value: 7.4e-36
                  EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH........HHHTC..... CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........xxxxx..... RF
    ABC_tran    1 lknvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren........esdee..... 84  
                  l+ ++l++k+g+ va+vG +G+GKSt++ l+ + ++ ++G+i++ g d++e +++ +r++i+ ++qep+l +++ +ren         +dee     
  EPX71095.1 1118 LRGLNLTIKPGQFVAFVGASGCGKSTMIGLIERFYDCQSGSIKVGGVDIREYNINDYREQIALVSQEPTLYQGT-IRENivlgasrdVRDEEiiecc 1213
                  5789*********************************************************************9.********97763333333333 PP

                  ....HHHHHHHSTTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                  ....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   85 ....iekalsklglkelkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137 
                      i++++  l +    +t  ++++ss+SgGqkqr+a+aral+++pk+lllDE+t+
  EPX71095.1 1214 kmanIHDFIMGLPN--GYETLSGRKGSSFSGGQKQRIAIARALIRNPKILLLDEATS 1268
                  32224555444444..4488888899*****************************96 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.2   0.1    0.0088       6.3      25      41 ..     441     457 ..     434     462 .. 0.88
   2 !   23.3   0.1     5e-08   3.6e-05     136     213 ..     559     632 ..     484     638 .. 0.87
   3 ?    2.8   0.1     0.094        67      25      42 ..    1129    1146 ..    1111    1161 .. 0.86
   4 !   13.7   0.0   4.2e-05      0.03     136     208 ..    1239    1307 ..    1160    1313 .. 0.78

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0088
                 SEEEEEESTTSSHHHHH CS
                 xxxxxxxxxxxxxxxxx RF
       SMC_N  25 sftaivGpNGSGKsnll 41 
                 ++ta+vG+ GSGKs ++
  EPX71095.1 441 KITALVGASGSGKSTII 457
                 699***********997 PP

  == domain 2  score: 23.3 bits;  conditional E-value: 5e-08
                 CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC-SCEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 136 lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemlekadklvgvtk 213
                 lLSgG+k+ +a+a    i  ++   + llDe  +aLD +    v + l+ +sk+   iv+++r  ++++ad++v v  
  EPX71095.1 559 LLSGGQKQRIAIARA--I--ISDPKILLLDEATSALDTNSEVSVQKALEDASKSRTTIVVAHRLSTIRNADNIVVVNA 632
                 69*****98887743..3..44556889********************************************998865 PP

  == domain 3  score: 2.8 bits;  conditional E-value: 0.094
                  SEEEEEESTTSSHHHHHH CS
                  xxxxxxxxxxxxxxxxxx RF
       SMC_N   25 sftaivGpNGSGKsnlld 42  
                  +f a vG+ G+GKs ++ 
  EPX71095.1 1129 QFVAFVGASGCGKSTMIG 1146
                  69999*********9985 PP

  == domain 4  score: 13.7 bits;  conditional E-value: 4.2e-05
                  CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC-SCE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  136 lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemlekadkl 208 
                  ++SgG+k+ +a+a       ++   + llDe  +aLD    k v e+l+++s+    + i++r   +++ad +
  EPX71095.1 1239 SFSGGQKQRIAIARA----LIRNPKILLLDEATSALDSYSEKVVQEVLNRASEGRTTVAIAHRLSSIQHADCI 1307
                  89*****98888754....356666899***********************************9999999866 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.2   8.9e-06    0.0064      22      39 ..     439     457 ..     431     460 .. 0.88
   2 !   11.6   0.1   0.00024      0.17      16      39 ..    1122    1145 ..    1116    1149 .. 0.86

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 8.9e-06
      AAA_29  22 kg.atlltGpsGsGKSTll 39 
                 +g +t l+G+sGsGKST++
  EPX71095.1 439 AGkITALVGASGSGKSTII 457
                 5779**************8 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 0.00024
      AAA_29   16 tieidlkgatlltGpsGsGKSTll 39  
                   ++i++ +++ ++G+sG GKST++
  EPX71095.1 1122 NLTIKPGQFVAFVGASGCGKSTMI 1145
                  5778888899************98 PP

>> ABC_ATPase  Predicted ATPase of the ABC class
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.49   3.5e+02     243     270 ..     438     465 ..     435     470 .. 0.76
   2 !    8.7   0.1   0.00091      0.65     300     353 ..     536     590 ..     531     637 .. 0.82
   3 !   16.6   0.0   3.7e-06    0.0026     297     375 ..    1213    1291 ..    1193    1312 .. 0.80

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.49
                 -SS.EEEEEE-TTSSHHHHHHHHHHCCSE CS
  ABC_ATPase 243 pkG.vtlIvGggfhGKsTLLeAlekGvyn 270
                 p G +t++vG    GKsT++  +e+  y+
  EPX71095.1 438 PAGkITALVGASGSGKSTIIGLVER-FYD 465
                 6677**************9865443.555 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00091
                 E--TTTB---CCC--ST.TEEESS--HHHHHHHHHHHHHHTT-SEEEEEGGGS-H CS
  ABC_ATPase 300 vDispFinnLPegkdtt.kfstedASGStsqAanimealeagakllLiDEDtsAt 353
                 ++   Fi +LPe+ dt+        SG   q  +i++a+  + k+lL+DE tsA 
  EPX71095.1 536 ANAYEFIMTLPEKFDTNvGQQGFLLSGGQKQRIAIARAIISDPKILLLDEATSAL 590
                 56678***********954555578****************************95 PP

  == domain 3  score: 16.6 bits;  conditional E-value: 3.7e-06
                  EEEE--TTTB---CCC--STTEEE.SS--HHHHHHHHHHHHHHTT-SEEEEEGGGS-HHHH---HHHHHHS-GGG--B-- CS
  ABC_ATPase  297 vkgvDispFinnLPegkdttkfst.edASGStsqAanimealeagakllLiDEDtsAtNlmirDermqelvskekepitp 375 
                   k ++i  Fi  LP+g +t +    +  SG   q  +i++al ++ k+lL+DE tsA       + +qe++++ +e+ t+
  EPX71095.1 1213 CKMANIHDFIMGLPNGYETLSGRKgSSFSGGQKQRIAIARALIRNPKILLLDEATSALDSY-SEKVVQEVLNRASEGRTT 1291
                  56789**************965551667*****************************9864.488888888887776555 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0   0.00037      0.26      98     117 ..     439     458 ..     392     470 .. 0.82
   2 !   13.7   0.0     6e-05     0.043      89     125 ..    1117    1154 ..    1080    1162 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00037
                  TTSEEEEECSTTSSHHHHHH CS
  RsgA_GTPase  98 kdktsvlvGqSGvGKStLin 117
                  ++k+++lvG SG GKSt+i 
   EPX71095.1 439 AGKITALVGASGSGKSTIIG 458
                  459**************996 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 6e-05
                   THHHHHHHCTT.SEEEEECSTTSSHHHHHHHHCTT--- CS
  RsgA_GTPase   89 gleelkellkd.ktsvlvGqSGvGKStLinallpelel 125 
                    l+ l+  +k  +++++vG SG GKSt+i  +    + 
   EPX71095.1 1117 VLRGLNLTIKPgQFVAFVGASGCGKSTMIGLIERFYDC 1154
                   45556666776699***************988765555 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.0    0.0001     0.072       1      51 [.     442     492 ..     442     506 .. 0.84
   2 ?    0.1   0.0      0.76   5.5e+02     220     270 ..     541     590 ..     495     602 .. 0.75
   3 !    6.4   0.0    0.0097         7       1      48 [.    1130    1177 ..    1130    1188 .. 0.84
   4 ?   -0.0   0.0      0.86   6.2e+02     236     272 ..    1239    1272 ..    1238    1295 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.0001
      AAA_21   1 lnvliGpNgsGKSnLLdaldllarldrdvegltdelsggggirkipslldl 51 
                 +++l+G+ gsGKS+++ + + + + ++ + +l  e+ g  ++++ +s + l
  EPX71095.1 442 ITALVGASGSGKSTIIGLVERFYDPIAGQVMLDGEDIGDLNTAWLRSHISL 492
                 79*****************99988888888888888888888888777665 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.76
      AAA_21 220 gvvflengdgqelparel..SdGtkrllalltallralkkgsllliDEpEngL 270
                 ++++l ++++ ++    +  S G+k+ +a++ a+++++   ++ll+DE  + L
  EPX71095.1 541 FIMTLPEKFDTNVGQQGFllSGGQKQRIAIARAIISDP---KILLLDEATSAL 590
                 55566666666666555555*******99999999999...9******66655 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.0097
      AAA_21    1 lnvliGpNgsGKSnLLdaldllarldrdvegltdelsggggirkipsl 48  
                  + +++G+ g+GKS+ + +++ + ++++ ++  + ++ +  +i +++  
  EPX71095.1 1130 FVAFVGASGCGKSTMIGLIERFYDCQSGSIKVGGVDIREYNINDYREQ 1177
                  6789*****************999988888888888888888777655 PP

  == domain 4  score: -0.0 bits;  conditional E-value: 0.86
      AAA_21  236 elSdGtkrllalltallralkkgsllliDEpEngLHP 272 
                  ++S G+k+ +a++ al+r +   ++ll+DE  + L+ 
  EPX71095.1 1239 SFSGGQKQRIAIARALIRNP---KILLLDEATSALDS 1272
                  67999999989999999988...9******8888876 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.0    0.0011      0.77      18      49 ..     440     471 ..     433     474 .. 0.81
   2 ?   -2.1   0.0       3.6   2.6e+03      82     115 ..     571     605 ..     522     615 .. 0.63
   3 !    8.4   0.0    0.0023       1.7      16      46 ..    1126    1157 ..    1119    1296 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0011
      AAA_30  18 drvavltGpAGtGKttalkalreaweaaggrv 49 
                  ++++l+G+ G+GK+t+++ +++ ++   g+v
  EPX71095.1 440 GKITALVGASGSGKSTIIGLVERFYDPIAGQV 471
                 45999***************999887665555 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 3.6
      AAA_30  82 grarlepgtllivDEagmv.dtkqlaallkaaeka 115
                 +ra +++ ++l+ DEa  + dt++  ++ ka+e+a
  EPX71095.1 571 ARAIISDPKILLLDEATSAlDTNSEVSVQKALEDA 605
                 44455666999999997665666665555555553 PP

  == domain 3  score: 8.4 bits;  conditional E-value: 0.0023
      AAA_30   16 sgdrvavltGpAGtGKttalkalreaweaa.g 46  
                  ++ ++++ +G+ G GK+t+++ +++ ++ + g
  EPX71095.1 1126 KPGQFVAFVGASGCGKSTMIGLIERFYDCQsG 1157
                  56679999***************999988744 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.5    0.0012      0.85      25      46 ..     441     462 ..     429     630 .. 0.82
   2 !    8.4   0.0    0.0037       2.6      25      46 ..    1129    1150 ..    1113    1208 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.0012
      AAA_16  25 elvllsGesGvGKsslvrellr 46 
                  ++ l+G+sG+GKs+++  + r
  EPX71095.1 441 KITALVGASGSGKSTIIGLVER 462
                 7899************966554 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.0037
      AAA_16   25 elvllsGesGvGKsslvrellr 46  
                  + v ++G+sG+GKs+++  + r
  EPX71095.1 1129 QFVAFVGASGCGKSTMIGLIER 1150
                  68999***********987765 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.0    0.0017       1.2      23      49 ..     441     466 ..     429     549 .. 0.85
   2 !    9.7   0.0   0.00089      0.64      25      68 ..    1130    1169 ..    1118    1276 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0017
      AAA_15  23 eeltvliGkNnsGKSsilealdlFlnn 49 
                 + +t l+G+ +sGKS+i+ + + F + 
  EPX71095.1 441 K-ITALVGASGSGKSTIIGLVERFYDP 466
                 4.9***************999999875 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00089
      AAA_15   25 ltvliGkNnsGKSsilealdlFlnnkekknkkvikiekedleif 68  
                  +  ++G+ ++GKS+ + +++ F + +    +  ik+   d++++
  EPX71095.1 1130 FVAFVGASGCGKSTMIGLIERFYDCQ----SGSIKVGGVDIREY 1169
                  899*******************9966....23333333333333 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.4    0.0028         2       6      30 ..     441     465 ..     439     617 .. 0.80
   2 !    8.6   0.1    0.0029       2.1       5     107 ..    1128    1276 ..    1124    1295 .. 0.52

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0028
      AAA_22   6 gilvvtGesGtGKTtllrrlleqld 30 
                 +i++++G sG+GK+t +  + + +d
  EPX71095.1 441 KITALVGASGSGKSTIIGLVERFYD 465
                 799************9988887775 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0029
      AAA_22    5 agilvvtGesGtGKTtllrrlleqldeeakaee................................erpevvfvtlpsstsskdllrellralglelk 69  
                   ++++ +G sG+GK+t +  + + +d ++   +                                +                   ++++    ++  
  EPX71095.1 1128 GQFVAFVGASGCGKSTMIGLIERFYDCQSGSIKvggvdireynindyreqialvsqeptlyqgtiR-------------------ENIVLGASRDVR 1205
                  689999***********9999999986655555555555555555333333333333333333220...................222222222222 PP

      AAA_22   70 a...........................erlsseellealeqalrarav...ielliiDEaqh.lr..see 107 
                  +                            r+ s+    + ++ + ara    +++l++DEa   l+  se+
  EPX71095.1 1206 DeeiiecckmanihdfimglpngyetlsGRKGSSFSGGQKQRIAIARALirnPKILLLDEATSaLDsySEK 1276
                  24444444444444444444444444322333333335555555555556666677777776666554444 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   0.0   0.00056       0.4      17      36 ..     433     457 ..     411     460 .. 0.73
   2 ?    6.2   0.0     0.019        13      14      37 ..    1122    1146 ..    1100    1176 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00056
      AAA_23  17 F.....skgltlItGpNGaGKTTil 36 
                 F       ++t+++G  G+GK+Ti+
  EPX71095.1 433 FsllcpAGKITALVGASGSGKSTII 457
                 344554568***************8 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.019
      AAA_23   14 eidFsk.gltlItGpNGaGKTTild 37  
                  ++  ++  +++++G  G+GK+T + 
  EPX71095.1 1122 NLTIKPgQFVAFVGASGCGKSTMIG 1146
                  44444425779***********985 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0   0.00093      0.67      29      49 ..     436     456 ..     416     458 .. 0.90
   2 ?   -1.2   0.0       1.8   1.3e+03      83     170 ..     522     603 ..     521     616 .. 0.61
   3 ?    6.0   0.1     0.011       8.1      30      49 ..    1125    1144 ..    1111    1146 .. 0.89

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00093
      AAA_25  29 llpagelallaGapgtGKttl 49 
                 l pag++++l+Ga+g+GK+t+
  EPX71095.1 436 LCPAGKITALVGASGSGKSTI 456
                 679****************97 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 1.8
      AAA_25  83 edelrrRlravgealrddarllvldlagveslpLfakdrggtlltadvdaleaaieevegvrlvviDplsralggdensnsdvgalve 170
                 ede+r+R+ ++ +++  +a +++++l+++ ++++ ++++  +  + +  a+++ai +  +++ + +D  ++al+   ns+  v++++e
  EPX71095.1 522 EDEVRERVFCAAKTA--NAYEFIMTLPEKFDTNVGQQGFLLSGGQKQRIAIARAIIS--DPKILLLDEATSALDT--NSEVSVQKALE 603
                 577888888777776..6889999988876666655443333322333344455444..7999999999888755..44455555555 PP

  == domain 3  score: 6.0 bits;  conditional E-value: 0.011
      AAA_25   30 lpagelallaGapgtGKttl 49  
                  +  g +++++Ga+g+GK+t+
  EPX71095.1 1125 IKPGQFVAFVGASGCGKSTM 1144
                  56799*************98 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.1     0.005       3.6      18      53 ..     442     477 ..     438     482 .. 0.84
   2 ?   -3.8   0.1       8.8   6.3e+03      81     109 ..     595     623 ..     586     630 .. 0.67
   3 !    8.6   0.0    0.0014         1      20      63 ..    1132    1176 ..    1126    1193 .. 0.85

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.005
  Zeta_toxin  18 lillgGqpGAGKselaellkdelerqgnvvrldpDd 53 
                 +  l+G++G+GKs+++ l+++  ++  + v ld+ d
  EPX71095.1 442 ITALVGASGSGKSTIIGLVERFYDPIAGQVMLDGED 477
                 66799*************999888877888887766 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 8.8
  Zeta_toxin  81 selvekllqeaiengyniivegtlrspdv 109
                  + v+k+l+ a + +  i+v   l+++ +
  EPX71095.1 595 EVSVQKALEDASKSRTTIVVAHRLSTIRN 623
                 45578888889998888888754444443 PP

  == domain 3  score: 8.6 bits;  conditional E-value: 0.0014
  Zeta_toxin   20 llgGqpGAGKselaellkdelerqgnvvrldpDdlRel.hPeyee 63  
                    +G++G+GKs+++ l+++  + q++ +++ + d+Re+ + +y+e
  EPX71095.1 1132 AFVGASGCGKSTMIGLIERFYDCQSGSIKVGGVDIREYnINDYRE 1176
                  5679*********************************93345555 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.0     0.015        11      26      50 ..     433     457 ..     416     466 .. 0.85
   2 !    8.9   0.0    0.0014         1      15      50 ..    1110    1145 ..    1102    1158 .. 0.87

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.015
       AAA_7  26 lelllknkkpvllvGptGtGKtvii 50 
                 ++ll+ ++k + lvG +G+GK++ii
  EPX71095.1 433 FSLLCPAGKITALVGASGSGKSTII 457
                 56788899999************98 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0014
       AAA_7   15 ptvdtvrysyllelllknkkpvllvGptGtGKtvii 50  
                  pt + +++   l+l +k ++ v +vG +G+GK+++i
  EPX71095.1 1110 PTRKHIQVLRGLNLTIKPGQFVAFVGASGCGKSTMI 1145
                  78888888888999********************98 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0     0.056        40       4      23 ..     445     464 ..     443     473 .. 0.85
   2 ?    6.5   0.0     0.011       7.5       4      38 ..    1133    1168 ..    1131    1190 .. 0.80
   3 ?   -1.6   0.0       3.5   2.5e+03      63      81 ..    1255    1273 ..    1240    1293 .. 0.72

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.056
                 EE--SSSSHHHHHHHGGGGB CS
       AAA_5   4 LvGppGtgKselaerlaaal 23 
                 LvG++G+gKs+++  + +++
  EPX71095.1 445 LVGASGSGKSTIIGLVERFY 464
                 9***********98887765 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.011
                  EE--SSSSHHHHHHHGGGGB.S--EEEEE--TT--H CS
       AAA_5    4 LvGppGtgKselaerlaaal.nreveyvqltrdtte 38  
                   vG++G+gKs+++  + +++ +++  ++ +  d++e
  EPX71095.1 1133 FVGASGCGKSTMIGLIERFYdCQSGSIKVGGVDIRE 1168
                  69***************9997777666666666555 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 3.5
                  --G-SEEEEESGGG--HHH CS
       AAA_5   63 aregeilvlDEveraesev 81  
                  +r+++il+lDE + a ++ 
  EPX71095.1 1255 IRNPKILLLDEATSALDSY 1273
                  45999******99886554 PP

>> SbcCD_C  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.1     0.016        12      63      87 ..     577     601 ..     537     604 .. 0.82
   2 ?    6.2   0.2     0.017        12      62      87 ..    1256    1281 ..    1219    1284 .. 0.70

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.016
     SbcCD_C  63 alrlvfLDEAFsklDeesiatllel 87 
                 ++++++LDEA s lD +s  ++ ++
  EPX71095.1 577 DPKILLLDEATSALDTNSEVSVQKA 601
                 5899***********9986666555 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.017
     SbcCD_C   62 palrlvfLDEAFsklDeesiatllel 87  
                  +++++++LDEA s lD+ s + + e+
  EPX71095.1 1256 RNPKILLLDEATSALDSYSEKVVQEV 1281
                  34899***********9877666555 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.039        28       3      18 ..     445     460 ..     444     489 .. 0.83
   2 ?    5.9   0.0     0.025        18       1      30 [.    1131    1173 ..    1131    1236 .. 0.79

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.039
      AAA_18   3 ltGtpGvGKttlakeL 18 
                 l G++G+GK+t+   +
  EPX71095.1 445 LVGASGSGKSTIIGLV 460
                 89*********98776 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.025
      AAA_18    1 IlltGtpGvGKttlakeLskrl.gf.............gvnlrd 30  
                  ++  G++G+GK+t+   ++ r   +              +n++d
  EPX71095.1 1131 VAFVGASGCGKSTMIGLIE-RFyDCqsgsikvggvdirEYNIND 1173
                  5678***********9994.443557776777755555445444 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0    0.0073       5.2      28      50 ..     445     467 ..     441     491 .. 0.88
   2 ?    4.1   0.0     0.031        22      27      48 ..    1132    1153 ..    1122    1200 .. 0.80

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0073
                 EEESTTSSHHHHHHHHHHHCS-- CS
     G-alpha  28 llGqseSGKsTilkqlkllykkg 50 
                 l+G+s+SGKsTi+  ++++y++ 
  EPX71095.1 445 LVGASGSGKSTIIGLVERFYDPI 467
                 89***********9999999875 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.031
                  EEEESTTSSHHHHHHHHHHHCS CS
     G-alpha   27 lllGqseSGKsTilkqlkllyk 48  
                   ++G+s++GKsT++  ++++y+
  EPX71095.1 1132 AFVGASGCGKSTMIGLIERFYD 1153
                  689************9999995 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.1      0.02        15       3      16 ..     444     457 ..     442     464 .. 0.86
   2 ?    5.9   0.1     0.018        13       2      15 ..    1131    1144 ..    1130    1150 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.02
      AAA_33   3 llvGlpGsGKstla 16 
                  lvG++GsGKst +
  EPX71095.1 444 ALVGASGSGKSTII 457
                 589*********75 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.018
      AAA_33    2 vllvGlpGsGKstl 15  
                  v +vG++G+GKst 
  EPX71095.1 1131 VAFVGASGCGKSTM 1144
                  689**********7 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.2      0.08        58       3      16 ..     444     457 ..     442     462 .. 0.91
   2 ?    6.5   0.0     0.012       8.4       2      19 ..    1131    1148 ..    1130    1182 .. 0.76

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.08
                 EEEESTTSSHHHHH CS
    MMR_HSR1   3 aivGrpNvGKStLi 16 
                 a+vG + +GKSt+i
  EPX71095.1 444 ALVGASGSGKSTII 457
                 89**********98 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.012
                  EEEEESTTSSHHHHHHHH CS
    MMR_HSR1    2 vaivGrpNvGKStLinal 19  
                  va+vG +  GKSt+i  +
  EPX71095.1 1131 VAFVGASGCGKSTMIGLI 1148
                  89***********99655 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.1     0.089        64       3      17 ..     444     458 ..     442     469 .. 0.87
   2 ?    6.7   0.1     0.011       7.7       2      18 ..    1131    1147 ..    1130    1160 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.089
      AAA_28   3 vitGgestGKTtlle 17 
                 +++G++++GK+t++ 
  EPX71095.1 444 ALVGASGSGKSTIIG 458
                 799*********985 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.011
      AAA_28    2 ivitGgestGKTtllea 18  
                  ++++G++++GK+t++  
  EPX71095.1 1131 VAFVGASGCGKSTMIGL 1147
                  89***********9865 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0     0.045        32      22      38 ..     442     458 ..     434     470 .. 0.82
   2 ?    5.5   0.0     0.011       8.1      21      38 ..    1129    1146 ..    1115    1156 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.045
                 EEEEEESTTSSHHHHHH CS
      NB-ARC  22 vvalvGmgGvGKttlak 38 
                 + alvG  G+GK+t++ 
  EPX71095.1 442 ITALVGASGSGKSTIIG 458
                 779***********975 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.011
                  EEEEEEESTTSSHHHHHH CS
      NB-ARC   21 lvvalvGmgGvGKttlak 38  
                   +va+vG  G+GK+t++ 
  EPX71095.1 1129 QFVAFVGASGCGKSTMIG 1146
                  599************975 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.054        39       3      27 ..     442     466 ..     440     478 .. 0.76
   2 ?    0.0   0.0      0.76   5.5e+02      30      54 ..     928     952 ..     921     980 .. 0.76
   3 ?    3.8   0.0     0.054        39       3      36 ..    1130    1163 ..    1128    1171 .. 0.81

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.054
                 EEEEEESTTSSHHHHHHHHHHHHHH CS
       SRP54   3 villvGlqGaGKTttlaKLaallkk 27 
                 +++lvG  G+GK t ++ + + +  
  EPX71095.1 442 ITALVGASGSGKSTIIGLVERFYDP 466
                 689************9977766655 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.76
                 S-EEEEEESTSSTTHHHHHHHHHHH CS
       SRP54  30 kkvllvaaDtfRaaAveQLktlaek 54 
                 ++++++a   +R+aA++ ++ + ++
  EPX71095.1 928 TSPVMIASGYYRVAALDRIQNNLSE 952
                 57899************99876544 PP

  == domain 3  score: 3.8 bits;  conditional E-value: 0.054
                  EEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEE CS
       SRP54    3 villvGlqGaGKTttlaKLaallkkegkkvllva 36  
                   +++vG  G GK t ++ + + +  +  ++ +  
  EPX71095.1 1130 FVAFVGASGCGKSTMIGLIERFYDCQSGSIKVGG 1163
                  578*************999888887766665555 PP

>> DPM3  Dolichol-phosphate mannosyltransferase subunit 3 (DPM3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.3      0.38   2.7e+02      28      59 ..     124     156 ..     102     159 .. 0.77
   2 ?   11.2   0.0   0.00044      0.32      40      79 ..     351     390 ..     317     393 .. 0.89
   3 ?   -2.1   0.6       6.3   4.5e+03      13      49 ..     794     828 ..     789     842 .. 0.67

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.38
        DPM3  28 lp.lskvqdevvpvlPlwalvlfGayslatlgy 59 
                 +  +++ ++++v+++ ++a+ +fG+  ++t+ +
  EPX71095.1 124 VDnFQHSVNQFVLYFVYIAIGVFGCSFVYTVAF 156
                 333688999****************99999876 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00044
        DPM3  40 vlPlwalvlfGayslatlgygvltfndcpeaakeLqkeik 79 
                 +++ ++ v+ ++ysla++  ++  f +c +aak++ + i+
  EPX71095.1 351 LISCFFAVMTASYSLANITPQMQAFANCASAAKKIFDTID 390
                 567788999*************************999887 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 6.3
        DPM3  13 lllalwlalllrlvslplskvqdevvpvlPlwalvlf 49 
                 +++ +w++ ++  v  p  +  ++v  ++ +w+++++
  EPX71095.1 794 AVVNAWYMNIFANVASP--DYFHQVNTFAVYWLILAI 828
                 67788999999999666..556666555555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1342 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       921  (0.0513693); expected 358.6 (0.02)
Passed bias filter:                      582  (0.0324614); expected 358.6 (0.02)
Passed Vit filter:                        69  (0.00384851); expected 17.9 (0.001)
Passed Fwd filter:                        27  (0.00150594); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              25  [number of targets reported over threshold]
# CPU time: 0.95u 0.32s 00:00:01.27 Elapsed: 00:00:00.48
# Mc/sec: 8397.54
//
Query:       EPX71096.1  [L=212]
Description: HDEL receptor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.6e-47  159.7  10.6    8.6e-47  159.7  10.6    1.4  2  ER_lumen_recept  ER lumen protein retaining receptor
  ------ inclusion threshold ------
      0.029   14.1  13.1      0.032   14.0   1.6    3.4  4  PQ-loop          PQ loop repeat


Domain annotation for each model (and alignments):
>> ER_lumen_recept  ER lumen protein retaining receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.7  10.6   9.6e-51   8.6e-47       1     147 []      28     169 ..      28     169 .. 0.97
   2 ?   -3.0   0.1       1.3   1.2e+04      48      61 ..     187     201 ..     174     209 .. 0.48

  Alignments for each domain:
  == domain 1  score: 159.7 bits;  conditional E-value: 9.6e-51
  ER_lumen_recept   1 svaGlSlktqilyalvfltryldlflylreeislyntlmkialillsiyiiylilvkfketyekekDtfklellivpslllallfhpgssktll 94 
                      s++G+Slk+ +l++lv++tryl+lf++++   sly + m+i++i++ +yi+ylil +++ ty+k+ Dtf+ ++l+ ++++lal+     +++++
       EPX71096.1  28 SCSGISLKSHLLFLLVYITRYLNLFWSFK---SLYFFSMRIIFICSESYICYLILQNLRPTYDKRLDTFRSGYLLGGCAILALIYPI--KYSVF 116
                      8***********************99997...9*************************************************87765..***** PP

  ER_lumen_recept  95 evlwtfsiiLesvAilPQlillqktgevesltshyvfalglyRalyllnWivr 147
                       +lwtfsi+LesvAilPQl++lq++ge+e++t+hy++a+ lyR ly+++Wi+r
       EPX71096.1 117 GILWTFSIWLESVAILPQLFMLQRSGEAETITAHYLLAMCLYRGLYIPHWIYR 169
                      ***************************************************97 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.3
  ER_lumen_recept  48 iyiiyl.ilvkfket 61 
                        ++y+ +++++++t
       EPX71096.1 187 QTVLYAdFAIVYRRT 201
                      223333344445555 PP

>> PQ-loop  PQ loop repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   1.6   3.6e-06     0.032      24      58 ..      23      57 ..      20      60 .. 0.90
   2 ?   -1.2   0.1       0.2   1.8e+03      39      56 ..      64      81 ..      57      85 .. 0.61
   3 ?    7.1   0.2   0.00049       4.4       4      40 ..     118     154 ..     115     157 .. 0.86
   4 ?   -2.4   0.1      0.46   4.1e+03       2      13 ..     180     191 ..     179     192 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 3.6e-06
     PQ-loop 24 NykrkSteGlSilflllwllGdilsllylilngfp 58
                  k++S++G+S+ + ll ll +i++ l+l+++  +
  EPX71096.1 23 MRKSRSCSGISLKSHLLFLLVYITRYLNLFWSFKS 57
                5699**************************99876 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.2
     PQ-loop 39 llwllGdilsllylilng 56
                 + ++++  ++ ylil++
  EPX71096.1 64 RIIFICSESYICYLILQN 81
                455566666777777776 PP

  == domain 3  score: 7.1 bits;  conditional E-value: 0.00049
     PQ-loop   4 ilgyislvlwlvsyiPQiikNykrkSteGlSilflll 40 
                 il ++s+ l++v+ +PQ+ +  ++  +e +   +ll 
  EPX71096.1 118 ILWTFSIWLESVAILPQLFMLQRSGEAETITAHYLLA 154
                 8999*****************9999999888777765 PP

  == domain 4  score: -2.4 bits;  conditional E-value: 0.46
     PQ-loop   2 seilgyislvlw 13 
                 s + g+i +vl+
  EPX71096.1 180 SVFAGIIQTVLY 191
                 778899999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       704  (0.039266); expected 358.6 (0.02)
Passed bias filter:                      303  (0.0169); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.44
# Mc/sec: 1448.49
//
Query:       EPX71097.1  [L=507]
Description: ubiquitin carboxy terminal hydrolase Ubp3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.5e-46  158.3   0.1    5.1e-46  157.2   0.0    1.5  2  UCH            Ubiquitin carboxyl-terminal hydrolase
    4.1e-08   33.2   0.2      1e-07   31.9   0.2    1.7  1  UCH_1          Ubiquitin carboxyl-terminal hydrolase
  ------ inclusion threshold ------
      0.088   12.3   0.3         26    4.2   0.1    3.3  3  Peptidase_C98  Ubiquitin-specific peptidase-like, SUMO isopep
       0.15   12.0   0.1       0.28   11.1   0.1    1.4  1  Borrelia_REV   Borrelia burgdorferi REV protein


Domain annotation for each model (and alignments):
>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0      0.79   3.6e+03      84     116 ..      94     126 ..      51     129 .. 0.67
   2 !  157.2   0.0   1.1e-49   5.1e-46       2     257 .]     135     503 ..     134     503 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 0.79
                 HHHHHSGGGTSSSTCEHHHHHHHHHHHHHHHHC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH  84 tlsklaksfsgykqqDaqEflaflLdqlhedln 116
                 + ++++ s++ ++++ a+  +a+l+++++ d++
  EPX71097.1  94 AAATTNTSIAPMEKKNANVAFAQLMESFQPDFQ 126
                 445556666666666666666666666666655 PP

  == domain 2  score: 157.2 bits;  conditional E-value: 1.1e-49
                 EES-SSSTHHHHHHHHHHHTSHHHHHHHHTCHHCCSSTCCCCC-.TT.TTS.TTHHHHHHHHHHHHHH...SH-CCEE--HHHHHHHHHHSGG..GTSS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxx..xxxx RF
         UCH   2 GlsNlGntCymnsvlQcLfsipelrdyllsleevkkesrnkkelnesnplgkkgelakalkdlfkell...kskskavsPkklkktlsklaks..fsgy 95 
                 G++N+Gn C+mns+lQ+L+ + ++ ++l+ ++++   + +k     s pl +     + +++ fk+ +   +++  ++ P+ ++++ +   +   ++++
  EPX71097.1 135 GFINTGNICFMNSILQALLYCVPFFNLLKLINKTVPYNFEK-----STPLIE---STTLFSNDFKQQWvedEEQGDSILPEVVYSSTKGNPRFeiLQSG 225
                 9*****************************65554444444.....334333...334455555555578877899****77777765554445556** PP

                 STCEHHHHHHHHHHHHHHHHCC.........................................HCCCHHHHHHCCCTTSHHHHHH-EEEEE........ CS
                 xxxxxxxxxxxxxxxxxxxxxx.........................................xxxxxxxxxxxxxxxxxxxxxxxxxxxx........ RF
         UCH  96 kqqDaqEflaflLdqlhedlnr.........................................evaeekwkkhlkrndslitdlfegqlks........ 145
                 +q+Da+Efl+  L++lhe++ +                                         ++++  + ++ + ++s+i+++f+gql+s        
  EPX71097.1 226 EQEDAEEFLNLFLNELHEEFLNeykkyqqkkgnktdeetikivngisdspennddnsgwtevgKNKKPVIARSATVERSPISQIFGGQLRStlrvpnqr 324
                 *******************9999*************************************87654555559**************************** PP

                 ..................................................EEEEEEB-SEEEEEEESEEETEE..EEE--SEEB--SEEE-GGGBSS-B CS
                 ..................................................xxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH 146 ..................................................klklkrlPeiLiihlkRfsynss..ksKlntkvefpeeldlssylaeek 192
                                                                   ++ +++lP++Li+hlkRf y+ +   +K+ ++v +p +l++ + + + +
  EPX71097.1 325 dsvtlepfqplqldiqaddihsvtdtlekmtepevlpewpsskgnvtatkQMYIESLPPVLILHLKRFFYDIAggTQKNYKPVAYPADLTIPQSVFSPS 423
                 **********************************************************************99999****************99888888 PP

                 TTS-TCS-BEEEEEEEEEES.CTTSEEEEEEEECTTTTEEEEEETTEEEEE-HH......CCCTT.........CEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxx.........xxxxxxx RF
         UCH 193 kkkteekkkYeLiavvvHsG.slssGHYvayiknekngkWykydDetvkevkee......eevls.........sayiLfY 257
                  + t   ++Y+L avv+H+G s+s+GHY++ +k+++ + W+++dD+++ +++ +       +v++          ay+LfY
  EPX71097.1 424 IRGTV-PTEYSLNAVVYHHGiSASGGHYTVDVKQHDGSGWIRIDDTHIHKIRVSdveipkAAVETgsyggsndkVAYLLFY 503
                 88766.556************************999999*************98666666344447777777789*****9 PP

>> UCH_1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.9   0.2   2.3e-11     1e-07       6     320 .]     139     470 ..     135     470 .. 0.72

  Alignments for each domain:
  == domain 1  score: 31.9 bits;  conditional E-value: 2.3e-11
                 xxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1   6 hivnsYlNslLQvlyfipplrnlal..shlakeckkehcLlcElgflf.......dmldkakglncqasnFlralssipeasalglileeeeetekssa 95 
                 + + +++Ns+LQ+l ++ p++nl++  +++   + +++  l E   lf         +d+ +g +++ +    + + +p   +++++++ e+e   +++
  EPX71097.1 139 TGNICFMNSILQALLYCVPFFNLLKliNKTVPYNFEKSTPLIESTTLFsndfkqqWVEDEEQGDSILPEVVYSSTKGNP---RFEILQSGEQE---DAE 231
                 5678*****************8765115555589999999********7755553334444455666666666666666...78887554433...343 PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxx...........................................xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1  96 islssliqsfnrflldqlekelketkkns...........................................seeesaieqllgtkaettirclkCgse 151
                 + l     ++++ +l++ +k  ++    +                                           + e s+i+q++g ++ +t+r       
  EPX71097.1 232 EFLNLFLNELHEEFLNEYKKYQQK----KgnktdeetikivngisdspennddnsgwtevgknkkpviarsaTVERSPISQIFGGQLRSTLRVP----- 321
                 334444444555555554444333....1445699************************************99999*****************9..... PP

                 xxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 152 ksrksstlvldlkyP.kpsnekkeakvtfasilksslerekttrawCekCkryqpteqrktvknlPpvLalnakle.eeeelelwktknwlpleiklsl 248
                 ++r+s+tl      P + +  +++  +++ + l++  e  +  + w +  k   + +++  +++lPpvL+l++k++  +         +  ++++k   
  EPX71097.1 322 NQRDSVTLE--PFQPlQLDI-QADDIHSVTDTLEKMTEP-EVLPEWPS-SKGNVTATKQMYIESLPPVLILHLKRFfYDI-------AGGTQKNYKPVA 408
                 666666666..233555444.344458999999998888.55666654.4777888899999************996664.......566777777766 PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 249 dedknleeklkeerekakaekeikvYeLqsvvvhigdskesghLvslvkvaekelerdppesqWylFNDflV 320
                 ++ +   ++ ++  +++   +  + Y+L++vv+h g s + gh+   vk    ++    + s W+ ++D ++
  EPX71097.1 409 YPADL--TIPQSVFSPSIRGTVPTEYSLNAVVYHHGISASGGHYTVDVK----QH----DGSGWIRIDDTHI 470
                 66654..333334444466777899***********9999****76666....22....3579999999876 PP

>> Peptidase_C98  Ubiquitin-specific peptidase-like, SUMO isopeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0     0.056   2.5e+02       6      25 ..     138     157 ..     135     204 .. 0.85
   2 ?    2.7   0.0     0.016        72     180     196 ..     373     389 ..     364     393 .. 0.87
   3 ?    4.2   0.1    0.0058        26     216     262 ..     431     480 ..     427     486 .. 0.73

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.056
  Peptidase_C98   6 nkenlCWLDsllvalvhlet 25 
                    n+ n+C+++s+l al+++  
     EPX71097.1 138 NTGNICFMNSILQALLYCVP 157
                    899************99864 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.016
  Peptidase_C98 180 rrkmvlekvpsvlmlHF 196
                    +++m +e++p+vl+lH 
     EPX71097.1 373 TKQMYIESLPPVLILHL 389
                    689*************6 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.0058
  Peptidase_C98 216 qYsvtaviqY...kkelkHFvtwirnsdgs.WlecDDLkgpvckthkrlev 262
                    +Ys++av+     +++  H+ + +++ dgs W+++DD +  +  + + +e+
     EPX71097.1 431 EYSLNAVVYHhgiSASGGHYTVDVKQHDGSgWIRIDDTHIHK-IRVSDVEI 480
                    688888886633346678*******************87443.34444555 PP

>> Borrelia_REV  Borrelia burgdorferi REV protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   6.2e-05      0.28      84     148 ..     239     307 ..     226     325 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 6.2e-05
                   .HHHHHHHHHHHHHHHHHHHHHH..HHHHHHHHHHH-SSTTSH......HHHHHHHHHHHHTT---TT.. CS
  Borrelia_REV  84 kelkekllnlqklfqeklaakla..alkavkvdieritdkdndd...leksklkirsiaklvGvntsgia 148
                   +el+e +ln  k +q+k   k +  ++k v+  i    ++++d+    e+ k k   ia+++ v+ s+i+
    EPX71097.1 239 NELHEEFLNEYKKYQQKKGNKTDeeTIKIVNG-ISDSPENNDDNsgwTEVGKNKKPVIARSATVERSPIS 307
                   59****************99985226777754.444433333332336999*****************75 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (507 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       776  (0.0432818); expected 358.6 (0.02)
Passed bias filter:                      527  (0.0293937); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.29s 00:00:00.86 Elapsed: 00:00:00.47
# Mc/sec: 3211.68
//
Query:       EPX71098.1  [L=693]
Description: ubiquitin-protein ligase E3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.6e-07   28.9   2.9    1.8e-05   24.5   3.8    2.3  2  zf-C3HC4         Zinc finger, C3HC4 type (RING finger)
    3.6e-06   26.7   6.5    1.3e-05   24.9   1.6    2.4  2  zf-C3HC4_2       Zinc finger, C3HC4 type (RING finger)
    2.2e-05   24.7   4.6    0.00025   21.3   1.0    2.4  2  zf-RING_2        Ring finger domain
    0.00013   21.9   7.5    0.00062   19.7   2.8    2.5  2  zf-RING_UBOX     RING-type zinc-finger
    0.00078   19.5   1.4    0.00078   19.5   1.4    2.5  2  zf-C3HC4_4       zinc finger of C3HC4-type, RING
     0.0014   18.4   1.6     0.0014   18.4   1.6    2.2  2  zf-C3HC4_3       Zinc finger, C3HC4 type (RING finger)
  ------ inclusion threshold ------
      0.035   14.0   9.9       0.13   12.2   9.9    2.0  1  zf-RING_5        zinc-RING finger domain
       0.45   10.3   2.6        1.3    8.9   2.6    1.8  1  PAM2             Ataxin-2 C-terminal region
          1    9.5   6.3        2.7    8.2   6.3    1.6  1  FYVE             FYVE zinc finger
        1.9    8.9   6.4       0.27   11.7   1.7    2.0  2  Lar_restr_allev  Restriction alleviation protein Lar
        2.6    8.4   5.9        9.6    6.6   5.9    2.0  1  zf-rbx1          RING-H2 zinc finger domain
        3.1    7.7  13.5         24    4.9   7.0    3.2  3  Prok-RING_4      Prokaryotic RING finger family 4
        8.6    6.2   7.4         27    4.6   2.9    2.6  2  zf-RING_11       RING-like zinc finger


Domain annotation for each model (and alignments):
>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   3.8   1.3e-08   1.8e-05       1      41 []     217     275 ..     217     275 .. 0.85
   2 ?    2.4   0.1       0.1   1.4e+02       1      10 [.     272     281 ..     272     286 .. 0.84

  Alignments for each domain:
  == domain 1  score: 24.5 bits;  conditional E-value: 1.3e-08
                 -TTT-S--SS-E.E-TTS--B-CHHHHHHHHC..................TSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepnelleCkHsfCskCirkilks..................rkkvkCPlC 41 
                 Cp Cl e   + +++ C+H fC++C+++++++                  ++ ++CP+C
  EPX71098.1 217 CPFCLGEKPVAARMSRCGHVFCYSCLLRYMETptneevkaaehsgskvpkCGIRSCPIC 275
                 ******9999999******************9988888888877776666666667777 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.1
                 -TTT-S--SS CS
    zf-C3HC4   1 CpiCleeake 10 
                 CpiCl+++ +
  EPX71098.1 272 CPICLDVIRI 281
                 ******9876 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   1.6   9.4e-09   1.3e-05       2      33 ..     217     248 ..     216     251 .. 0.93
   2 ?    3.9   0.2     0.036        50       2       9 ..     272     279 ..     271     283 .. 0.87

  Alignments for each domain:
  == domain 1  score: 24.9 bits;  conditional E-value: 9.4e-09
  zf-C3HC4_2   2 CpiCldmlkdpsvvtpCgHvfCqkCilrsLee 33 
                 Cp Cl +   + ++  CgHvfC++C+lr++e 
  EPX71098.1 217 CPFCLGEKPVAARMSRCGHVFCYSCLLRYMET 248
                 *******9999*****************9985 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.036
  zf-C3HC4_2   2 CpiCldml 9  
                 CpiCld++
  EPX71098.1 272 CPICLDVI 279
                 ******98 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   1.0   1.8e-07   0.00025       3      36 ..     217     248 ..     215     253 .. 0.73
   2 ?    4.2   0.1      0.04        55       2      11 ..     271     280 ..     270     288 .. 0.76

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 1.8e-07
   zf-RING_2   3 CpICleelssadsvlllpCgHvfhreClerwlrs 36 
                 Cp Cl e      ++   CgHvf+++Cl r++++
  EPX71098.1 217 CPFCLGEKPV--AARMSRCGHVFCYSCLLRYMET 248
                 9***933332..233337**********999865 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.04
   zf-RING_2   2 eCpICleels 11 
                 +CpICl+ + 
  EPX71098.1 271 SCPICLDVIR 280
                 7****98775 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   2.8   4.5e-07   0.00062       1      26 [.     217     247 ..     217     267 .. 0.69
   2 ?    4.1   0.2     0.034        47       1       9 [.     272     280 ..     272     289 .. 0.80

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 4.5e-07
  zf-RING_UBOX   1 CpIClelftdP....lvlpCGHtFCreCl....w 26 
                   Cp Cl +   P    +   CGH+FC +Cl    +
    EPX71098.1 217 CPFCLGEK--PvaarMS-RCGHVFCYSCLlrymE 247
                   99***866..7554333.6**********65431 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.034
  zf-RING_UBOX   1 CpIClelft 9  
                   CpICl++  
    EPX71098.1 272 CPICLDVIR 280
                   *****9875 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   1.4   5.7e-07   0.00078       1      36 [.     217     253 ..     217     258 .. 0.82
   2 ?    1.0   1.1      0.37     5e+02       1       6 [.     272     277 ..     267     280 .. 0.88

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 5.7e-07
  zf-C3HC4_4   1 CPiCldYLekPvsl...eCGhsfClsCisslqkepdgeq 36 
                 CP Cl   ekPv      CGh+fC sC+ ++++ p +e+
  EPX71098.1 217 CPFCLG--EKPVAArmsRCGHVFCYSCLLRYMETPTNEE 253
                 888987..8999753336**************9998875 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.37
  zf-C3HC4_4   1 CPiCld 6  
                 CPiCld
  EPX71098.1 272 CPICLD 277
                 999998 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   1.6     1e-06    0.0014       4      35 ..     216     247 ..     213     255 .. 0.85
   2 ?    1.3   0.4      0.23   3.2e+02      38      46 ..     270     278 ..     261     284 .. 0.71

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 1e-06
                 B-TTTSSS.BS-EEETTEEEEEE-HHHHHHHHH CS
  zf-C3HC4_3   4 eCviCler.prnvvllpCgHlvlCeeCaekllk 35 
                  C+ Cl + p  + + +CgH+ +C++C+ ++++
  EPX71098.1 216 VCPFCLGEkPVAARMSRCGHV-FCYSCLLRYME 247
                 6****98648889999*****.******99865 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.23
                 -B-TTT--B CS
  zf-C3HC4_3  38 kkCpiCrrp 46 
                 ++CpiC   
  EPX71098.1 270 RSCPICLDV 278
                 457777544 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   9.9   9.6e-05      0.13       2      42 ..     217     275 ..     208     277 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 9.6e-05
   zf-RING_5   2 CnkCfeklskeekfyltsCgHifCekClkkll....................ekeavCpiC 42 
                 C+ C  +     ++ + +CgH+fC +Cl +++                       + CpiC
  EPX71098.1 217 CPFCLGEK--PVAARMSRCGHVFCYSCLLRYMetptneevkaaehsgskvpkCGIRSCPIC 275
                 55565555..77799*****************99999888888888888877777888888 PP

>> PAM2  Ataxin-2 C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   2.6   0.00092       1.3       5      16 ..      21      32 ..      20      32 .. 0.93

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00092
                -SSTTSS----T CS
        PAM2  5 kLNPnAkEFVPs 16
                kLN+nA+ F P+
  EPX71098.1 21 KLNVNAPSFSPN 32
                8*********96 PP

>> FYVE  FYVE zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   6.3     0.002       2.7       9      65 ..     214     278 ..     207     280 .. 0.62

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.002
                 -SB-TTT--B--SSS--EE-TTT--EE-STTS-EEE.EE.......GGGTEEEEE...........EE-HHHHHH CS
        FYVE   9 vkkCeiCakkFsllrrrhhCrlCGkvvCekCssklvall.......ekeaeeksv...........rvCkeClae 65 
                 v+ C+ C  +  +  r      CG+v+C++C    ++++                           r C  Cl+ 
  EPX71098.1 214 VAVCPFCLGEKPVAARM---SRCGHVFCYSCLLRYMETPtneevkaA-------EhsgskvpkcgiRSCPICLDV 278
                 55555555555444444...369*********888877744333330.......134445555566999999875 PP

>> Lar_restr_allev  Restriction alleviation protein Lar
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   1.7   0.00019      0.27       4      51 ..     215     258 ..     213     261 .. 0.73
   2 ?   -3.4   0.2       9.7   1.3e+04       5       9 ..     271     275 ..     269     276 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00019
  Lar_restr_allev   4 kpCPfCggravlersqrvvaeigqcvyCadCgastpwfkiaedeaeae 51 
                        CPfC g++ +  + ++       v+C  C     ++++ e++++ae
       EPX71098.1 215 AVCPFCLGEKPVAARMSRCG----HVFCYSCLLRYMETPTNEEVKAAE 258
                      67****99888888888888....9******99555555555554444 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 9.7
  Lar_restr_allev   5 pCPfC 9  
                       CP C
       EPX71098.1 271 SCPIC 275
                      7**** PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   5.9     0.007       9.6       6      48 ..     208     252 ..     206     276 .. 0.68

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.007
     zf-rbx1   6 Crnele.eacieckapgdeecpvvlGeCgHaFHlhCiskWlkt...r 48 
                 C++ ++ + c+ c  ++   +   +++CgH+F   C+ ++++t   +
  EPX71098.1 208 CSSDFQvAVCPFCLGEKP--VAARMSRCGHVFCYSCLLRYMETptnE 252
                 666665456666666544..578889**************9986550 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.8     0.036        50      24      37 ..     208     221 ..     206     226 .. 0.86
   2 ?    4.9   7.0     0.017        24       1      25 [.     217     242 ..     217     247 .. 0.78
   3 ?    2.1   0.3      0.13   1.8e+02      31      38 ..     270     277 ..     261     284 .. 0.79

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.036
  Prok-RING_4  24 CfdskdlssCPlCq 37 
                  C ++ + + CP+C 
   EPX71098.1 208 CSSDFQVAVCPFCL 221
                  88999999*****5 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.017
  Prok-RING_4   1 CvlC.geqekkailepCgHlvCkeCf 25 
                  C +C ge++  a+++ CgH++C +C+
   EPX71098.1 217 CPFClGEKPVAARMSRCGHVFCYSCL 242
                  6666245567789999*********7 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.13
  Prok-RING_4  31 ssCPlCqr 38 
                   sCP+C  
   EPX71098.1 270 RSCPICLD 277
                  59****75 PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   2.9      0.02        27      14      29 .]     227     242 ..     215     242 .. 0.73
   2 ?    3.2   0.1     0.055        75       2      10 ..     272     280 ..     271     286 .. 0.86

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.02
  zf-RING_11  14 alfilpCsHtFHfkCI 29 
                 a ++  C+H+F + C+
  EPX71098.1 227 AARMSRCGHVFCYSCL 242
                 678889*****99995 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.055
  zf-RING_11   2 CsICLeefk 10 
                 C ICL+ + 
  EPX71098.1 272 CPICLDVIR 280
                 ******986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (693 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1490  (0.0831056); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        71  (0.00396006); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.75u 0.31s 00:00:01.06 Elapsed: 00:00:00.51
# Mc/sec: 4075.94
//
Query:       EPX71099.1  [L=120]
Description: autophagy associated protein Atg8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.6e-50  168.5   0.2    4.1e-50  168.3   0.2    1.0  1  Atg8      Autophagy protein Atg8 ubiquitin like
    2.5e-06   27.8   0.0      3e-06   27.5   0.0    1.1  1  APG12     Ubiquitin-like autophagy protein Apg12
  ------ inclusion threshold ------
       0.14   12.1   0.1        6.7    6.7   0.0    2.3  2  SH3_9     Variant SH3 domain


Domain annotation for each model (and alignments):
>> Atg8  Autophagy protein Atg8 ubiquitin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  168.3   0.2   6.9e-54   4.1e-50       1     104 []      13     116 ..      13     116 .. 0.99

  Alignments for each domain:
  == domain 1  score: 168.3 bits;  conditional E-value: 6.9e-54
                 HHHHHHHHHHHHSTTEEEEEEEE-TTSSS---S-SEEEEETTSBHHHHHHHHHHHTT--TTS-EEEEETTE-SSTTSBHHHHHHHH--TTSSEEEEEES CS
        Atg8   1 krkkesekirekypdriPvivekaekeklpeldkkkylvPedltvgqlvliirkrlqlepekalfllvnetlpstsatmsalyeeekdedgflyvvyss 99 
                 krk+es++irekypdriPvi+ek++k++++ +dkkkylvP+dltvgq+v++irkr++l+peka+f++++e lp+t+a ms++y+e+k edgfly++ys+
  EPX71099.1  13 KRKTESQRIREKYPDRIPVICEKVDKSDIAAIDKKKYLVPSDLTVGQFVYVIRKRIKLSPEKAIFIFIDEILPPTAALMSTIYDEHKSEDGFLYITYSG 111
                 79************************************************************************************************* PP

                 SSTB- CS
        Atg8 100 entfG 104
                 entfG
  EPX71099.1 112 ENTFG 116
                 ****9 PP

>> APG12  Ubiquitin-like autophagy protein Apg12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.5   0.0   5.1e-10     3e-06      11      87 .]      40     116 ..      29     116 .. 0.90

  Alignments for each domain:
  == domain 1  score: 27.5 bits;  conditional E-value: 5.1e-10
                 TS---S--EEEEETTSBHHHHHHHHHHHCT-.SSSS-EEEETTTB---TTSBHHHHHHHH-BTTEEE.EEEESSS--- CS
       APG12  11 dvpilkkkklkvnasdtvakvilflkkeLklqaseslflYvnnsFaPsPdeeveeLyecfgtdkklv.lnYcisvAfG 87 
                 d+  + kkk+ v +  tv +++  ++k++kl+ ++ +f+++++   P+    + ++y+ +++++ ++ ++Y+ +  fG
  EPX71099.1  40 DIAAIDKKKYLVPSDLTVGQFVYVIRKRIKLSPEKAIFIFIDEILPPT-AALMSTIYDEHKSEDGFLyITYSGENTFG 116
                 7788999************************************99887.5789********7776666****999998 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.015        91      15      26 ..      55      66 ..      54      73 .. 0.86
   2 ?    6.7   0.0    0.0011       6.7      20      39 ..      93     112 ..      93     116 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.015
       SH3_9 15 LqrGDvitviee 26
                L +G++++vi++
  EPX71099.1 55 LTVGQFVYVIRK 66
                889*******87 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0011
       SH3_9  20 vitvieesedgWlegsltGr 39 
                 +i+ +++sedg+l+ +++G+
  EPX71099.1  93 TIYDEHKSEDGFLYITYSGE 112
                 58999**********99664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       472  (0.0263261); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.29s 00:00:00.68 Elapsed: 00:00:00.43
# Mc/sec: 829.93
//
Query:       EPX71100.1  [L=201]
Description: cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.4e-47  161.9   0.1    1.7e-47  161.6   0.1    1.0  1  Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans iso


Domain annotation for each model (and alignments):
>> Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  161.6   0.1   9.7e-52   1.7e-47       3     157 ..      33     187 ..      31     188 .. 0.88

  Alignments for each domain:
  == domain 1  score: 161.6 bits;  conditional E-value: 9.7e-52
  Pro_isomerase   3 dietss..kGrivieLfadkaPktvenFlklvkeg....fYdgttFhRvikgfmvqgGdptgktsageqe.kkggesiraipdEitsklkh.krGa 90 
                    d++ ++  +Gr+++ L+++++Pkt+enF+ l+ +g     Y+g++FhRvi++fm+qgGd+t+++   ++  +  g    +++dE+ +k++h + G+
     EPX71100.1  33 DLKQGDefLGRVELGLYGKTVPKTAENFRVLA-TGekgfSYEGSSFHRVIPNFMIQGGDFTNHDG--TGGkSIYG---PRFRDEN-FKISHnRVGL 121
                    566655678***********************.5668899*******************999855..32213333...69*****.67777588** PP

  Pro_isomerase  91 lamartgkepnsagsqFfItlkeaphldgkytvFGkVveGmdvvekiekvetde.erpkknvkivsae 157
                    l+ma++g  p+++gsqFfIt++++p+ldg+++vFG+Vv+G+d+++ki+k++td+ +rp  +v+i++ +
     EPX71100.1 122 LSMANAG--PDTNGSQFFITTSKTPWLDGRHVVFGEVVSGYDIIKKISKTRTDNrDRPIVDVVIAKSG 187
                    *****98..8*****************************************************99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       279  (0.0155614); expected 358.6 (0.02)
Passed bias filter:                      266  (0.0148363); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1464.59
//
Query:       EPX71101.1  [L=232]
Description: hypothetical protein SOCG_01319 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       529  (0.0295053); expected 358.6 (0.02)
Passed bias filter:                      177  (0.00987227); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 1630.44
//
Query:       EPX71102.1  [L=135]
Description: hypothetical protein SOCG_01321 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-15   57.9  12.4    1.6e-15   57.4  12.4    1.2  1  Stc1      Stc1 domain
  ------ inclusion threshold ------
       0.17   12.4  10.3        5.4    7.6   9.9    2.7  2  zf-CHY    CHY zinc finger


Domain annotation for each model (and alignments):
>> Stc1  Stc1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.4  12.4   1.8e-19   1.6e-15       2      84 ..      24     103 ..      23     104 .. 0.91

  Alignments for each domain:
  == domain 1  score: 57.4 bits;  conditional E-value: 1.8e-19
                 -SSS--EEETTTS-HHHHHTTTTEEEE-S-.......----TTTS-----EEE-SSS--EEESTTS-HHHHHS.SS---HHHH CS
        Stc1   2 CkeckkkkplseFSkkqlkklekklaeekakvkkakskikCkectakqateleCsaCqktkpldeFsksqrrkpdaarCkdCv 84 
                 C++ck+ k +se++++q++k  ++ +  ++ ++  + k+ C++ct+kqa  l+CsaC+++kpl +F++sqr+k  a+rC++Cv
  EPX71102.1  24 CMRCKQAKGRSEYNDTQWQKGYRRWN--GKIISLPNPKAICSSCTPKQASILNCSACDEDKPLTAFTRSQRCK-MAPRCQNCV 103
                 ********************855553..456777888************************************.********8 PP

>> zf-CHY  CHY zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   9.9   0.00061       5.4      16      70 ..      18     100 ..       6     103 .. 0.65
   2 ?    4.3   0.7    0.0065        58      12      39 ..      89     116 ..      82     126 .. 0.71

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.00061
      zf-CHY  16 CkklyaCreCH.................eeledhelerlevkevlcllCeteqekavlCkkCkk........efaey.......fCp 70 
                  +++ +C +C                  +   + ++  l   + +c+ C+ +q +  +C++C++        +            C+
  EPX71102.1  18 KNNFLTCMRCKqakgrseyndtqwqkgyR-RWNGKIISLPNPKAICSSCTPKQASILNCSACDEdkpltaftR---SqrckmapRCQ 100
                 56677888888888888777665544321.234455666777889*****************88776554431...13233333344 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.0065
      zf-CHY  12 rapcCkklyaCreCHeeledhelerlev 39 
                 r + Ck +  C++C + ++++ +e +++
  EPX71102.1  89 RSQRCKMAPRCQNCVKVQRNEGVEDHDE 116
                 6778888888999986555555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       745  (0.0415528); expected 358.6 (0.02)
Passed bias filter:                      271  (0.0151152); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 992.94
//
Query:       EPX71103.1  [L=811]
Description: ubiquitin-protein ligase E3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-84  283.5   0.1    4.6e-84  282.5   0.1    1.5  1  HECT      HECT-domain (ubiquitin-transferase)


Domain annotation for each model (and alignments):
>> HECT  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  282.5   0.1   2.6e-88   4.6e-84       2     306 ..     488     810 ..     487     811 .] 0.95

  Alignments for each domain:
  == domain 1  score: 282.5 bits;  conditional E-value: 2.6e-88
                 HHHHHHT-GGGSSE.EESSTTSSSEEE-TTHHHHS....HHHHHHHHHHHHHTT--BSS-B-HHHHHHHTT-.---TCHHHHH-HHHHHHHHHHH..HS CS
                 xxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT   2 llskelldpklglf.eeesedsgtlypkpssseeellklfeflGkvlGkaiyeeilldlpfsraflkfllgeekitledleeidpelakslkellsles 99 
                 lls+e++dp++glf ++ +e+  +++++ ++++ + +++++++G+++G+a+y+++ ld++++++ +k+llg  ++tl+d++++ p+l++ l+ell++e 
  EPX71103.1 488 LLSREIFDPSFGLFeSYPDEQMDYVWFNTNNNSVN-KEYYHLVGVLMGMAVYNSVNLDVRLPPVCYKKLLGL-PLTLNDMADFRPSLTNGLRELLEFEG 584
                 89************666778888999998865555.599********************************6.**********************9966 PP

                 -GGG...GT-BSEEEEE..TTEEEEEESSTTGGGSB--TTTHHHHHHHHHHHHHTGGGHHHHHHHHHHHHTTS-HHHHTTS-HHHHHHHHBCSSS.--H CS
                 xxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT 100 nteevedlaLtFtipen..agasatieLipnGanipVtnenkkeYiklyvnyllkksvekqleaflkGfsevipskalklfdaeelellisGedelidv 196
                 +    e+++L+Fti+     g++ t+eLi++G++i+++n+n+keY+ +y +yll++sv+++++ f++Gf +v+  +al+lf+++e+e+l+ G++e i++
  EPX71103.1 585 DV--EETYGLNFTINVPtgTGYE-TVELIKDGSHISLNNKNRKEYVVAYSDYLLNTSVKSPFSTFQEGFLKVCGGNALSLFQEQEIEKLVRGNEEHINW 680
                 65..688******9977555666.*************************************************************************** PP

                 HHHHHTEEEETT--TTS........................HHHHHHHHHHHHS-HHHHHHHHHHHHSSSS--TTCGGG-B--EEEEE-S..-TTS--E CS
                 xxxxxxxxxxxxxxxxx........................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT 197 edlrrnteykggynaes........................etiewlweilkefspeekrlfLqFvTgssrlPlgGfaelhpkftierkskedetrLPt 271
                 + lr+ ++y+  yn+es                        + i wlw+++ +++++++r++L F+Tgs+r+P++G++++  ++ ++  +  d+++LP 
  EPX71103.1 681 DLLRATCTYDM-YNRESicrqsgrvherrshmlnnhsvqkiSAIAWLWDVIFSLTEDKQRKLLVFMTGSDRIPATGIQSI--QLRVSILG-PDTEKLPI 775
                 *********75.********************************************************************..99999977.99****** PP

                 EEGGGTEEEE---SSHHHHHHHHHHHHHHHH--XX CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT 272 ahTCfnlLklpdYsskeilkekLltAieetegFel 306
                 ahTCfn+L++++Ys++e+l++kL+ Ai et+gF+l
  EPX71103.1 776 AHTCFNQLCIWEYSTREKLERKLNRAIYETKGFGL 810
                 *********************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (811 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       647  (0.0360868); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.30s 00:00:00.97 Elapsed: 00:00:00.48
# Mc/sec: 5123.79
//
Query:       EPX71104.1  [L=710]
Description: para-aminobenzoate synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.7e-76  254.7   0.0    1.5e-75  254.1   0.0    1.3  1  Chorismate_bind  chorismate binding enzyme
    3.4e-31  108.5   0.0    4.8e-31  108.0   0.0    1.2  1  GATase           Glutamine amidotransferase class-I
      1e-16   61.4   0.0    2.1e-16   60.4   0.0    1.6  1  Anth_synt_I_N    Anthranilate synthase component I, N termina
    1.1e-06   28.5   0.0    2.2e-06   27.6   0.0    1.4  1  Peptidase_C26    Peptidase C26


Domain annotation for each model (and alignments):
>> Chorismate_bind  chorismate binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  254.1   0.0   3.3e-79   1.5e-75       2     258 .]     437     692 ..     436     692 .. 0.97

  Alignments for each domain:
  == domain 1  score: 254.1 bits;  conditional E-value: 3.3e-79
                      HCHHHHHHHHHHHHHHTTS-SEEEEEEEEEECESS-B-HHHHHHHHHCTBSSSEEEEEEETTEEEEEEESSEEEEEETTSEEEEECEEEEEEHS CS
  Chorismate_bind   2 redYaeavekvkeeiragdlykvvlsrrlkaeleaavdplalyralrarnpapysflleledsellgaSPElllkveggrrietepiaGTrarg 95 
                      ++dY ++v+ ++e++ agd+y+++l+ ++ a+++  ++  +ly ++r++np++++++l++++ +ll++SPE+++k e++ +++++pi+GT ++g
       EPX71104.1 437 EQDYTDRVRVCQEKLLAGDSYEMCLTDTTFASTDPYLSDYDLYLQVRSHNPSSFAGFLRFPHLTLLCCSPERFMKYENS-TCHFSPIKGTLKKG 529
                      689**************************************************************************66.**********9665 PP

                      SSHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCBSCCEEEEECCEEEEEETTEEEEEEEEEEEESTT--HHHHHHHCSS-CCCSEESHHH CS
  Chorismate_bind  96 ktpeedealeeelledeKeraEhlmivdlirndLgkvakpgsvkvpelfkverysevlhlvstiegelkedvslldllkalfPtgavtGaPkkr 189
                        p+   +++++ l ++K+ aE  mi+dlirndL+++ak gsv+vp+l++ve++++v+ l s+i g+++++v+++d+l+++fP+g++tGaPk r
       EPX71104.1 530 --PQMTYEEARSKLLNPKDTAELNMIIDLIRNDLHQLAKKGSVEVPQLYQVEEHPTVYSLLSHIYGQVDKSVTAWDVLAKCFPPGSMTGAPKLR 621
                      ..5667888899999******************************************************************************* PP

                      HHHHHHHHSSS--TTTTSEEEEEETTS-EEEEEE-SEEEE..ETTEEEEEEEEEEETT--HHHHHHHHHHH CS
  Chorismate_bind 190 ameiidelEearRgvYaGavgyldadgeaelavvIRtavv..kdkelrlgaGaGIvadSdpeaEyeEtlaK 258
                      ++++++elE++ Rg+Y+G++gy+d++g+ e++vvIR+a+   +d+ +r+gaG+++++ S+p  EyeE+l K
       EPX71104.1 622 TVRMLEELEPHGRGIYSGTLGYWDVTGSSEFNVVIRSAFKydEDNLWRIGAGGAVTVLSTPLGEYEEMLLK 692
                      ****************************************877799**********************998 PP

>> GATase  Glutamine amidotransferase class-I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.0   0.0   1.1e-34   4.8e-31       2     187 ..      13     195 ..      12     198 .. 0.88

  Alignments for each domain:
  == domain 1  score: 108.0 bits;  conditional E-value: 1.1e-34
                 EEESSTSTHHHHHHHHHHTT..-EEEEEETTSHHHHHHHTHHSTSEEEEEEESSCTT.TTTHHHHHHHHCTSTS-EEEETHHHHHHHHHTTTEEEEEEC CS
      GATase   2 liDnydsvtenlvhalvelg..vkvevvpidasaeeilellknpdgilvsgGpgspg.vegkieaikearenkiPiLGICLGmQllaiefgrkvvkeke 97 
                 l+D+yds+t n+++ + ++   ++++ v +d+     ++ l+ +d+i++ +Gpg+p+ +     + +++ ++++P LGICLG+Q la+ +g +v k+ +
  EPX71104.1  13 LVDCYDSYTFNVHDLIQRVSseCTITTVHWDTARPDLWDRLNCFDAIFIGPGPGNPSeYA---FVFEKIWNSDVPTLGICLGFQSLALYYGCSVDKMPT 108
                 89************99988844666666677777777777999*************9543...455677789*************************** PP

                 EEEEEEEEEEEETTTCGGTTTTSEEEEEEEEEEEEESGCHHHTTEEEEEEEETTEEEEEEEEETTTEEEESSBTTSTTSTTHHHHHHHHH CS
      GATase  98 kehhggtmrlgddetallyglknevierhrHryevnpkelepaglevtakseddeelmeiiekknpfvgvQFHPEststpegpellfnfl 187
                  + hg  + ++ ++ +++++l + v+ +++H++ v+   +  + l+v+aks++d+ +m+i   ++p +g+ +HPEs+ +    ++++nf+
  EPX71104.1 109 LPWHGRASSIRTTNDSIYQNL-PLVKGMRYHSLYVDS--IPTNALRVLAKSTEDQIIMAIEAVEKPHYGILYHPESIGSSDAVSIVRNFF 195
                 ************777777777.**************8..66666********************************************98 PP

>> Anth_synt_I_N  Anthranilate synthase component I, N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.4   0.0   4.7e-20   2.1e-16       3     142 .]     244     394 ..     242     394 .. 0.76

  Alignments for each domain:
  == domain 1  score: 60.4 bits;  conditional E-value: 4.7e-20
  Anth_synt_I_N   3 ltplsvylklaeee.hkflLeSaeneggegrySfigldp..fle.lkskngeveveg....pegeeleeeepldalrellerfrsaedseptelpf 90 
                    ++pl+v+  l   +   ++L+Sa   ++ g++S++g+ +  f   +++k++ ++++     +++ee+ e+++++++ ++++++++  +  + +lpf
     EPX71104.1 244 VDPLTVVDYLINVNkPICFLDSA---KKPGKFSIVGFFDgpFSHfIRYKKSISTTYIvnchNNREEKYEGDFWEIVAKFMDQHKAF-P-IDSKLPF 334
                    56777777776655579******...699********9855444244444444444468866677777777*************44.3.3679*** PP

  Anth_synt_I_N  91 vgGlvGylgYDl.......vreieklp.ksakddlnlpdarlilydtlivfDhkerrlyl 142
                     gG++G +gY++       + ei  +  +++ +++n  da+l+++d+ ivfD + ++ y+
     EPX71104.1 335 HGGIIGAIGYECsdyssrsIAEISSFAdSAERNEKNYVDAELAFVDRSIVFDLEDKKAYV 394
                    ************888866666666555455777777*******************99885 PP

>> Peptidase_C26  Peptidase C26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   0.0     5e-10   2.2e-06      98     216 .]      75     180 ..      70     180 .. 0.80

  Alignments for each domain:
  == domain 1  score: 27.6 bits;  conditional E-value: 5e-10
  Peptidase_C26  98 iraalergvPilgiCrGlqllnvalGGtlyqdieeqsgltdhreheqsaashavkvekgsllaellgseeievnslHhqaikel.aeelrveAvae 192
                    ++++ +++vP lgiC+G+q l+  +G ++ +    +++l           + +++++++s++++l     ++   +H+  ++ +  + lrv A ++
     EPX71104.1  75 FEKIWNSDVPTLGICLGFQSLALYYGCSVDK----MPTLPW------HGRASSIRTTNDSIYQNLPL---VKGMRYHSLYVDSIpTNALRVLAKST 157
                    56778999*************7777766433....223332......356789*************9...555667888888751567******99 PP

  Peptidase_C26 193 .DgviEaieseeakafvlgvQwHPE 216
                     D++i aie+ e  ++ +g+ +HPE
     EPX71104.1 158 eDQIIMAIEAVE--KPHYGILYHPE 180
                    9*********99..479*******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (710 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       376  (0.0209716); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.61u 0.26s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 4949.78
//
Query:       EPX71105.1  [L=525]
Description: hypothetical protein SOCG_01323 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    0.00069   20.0  16.2    0.00069   20.0  16.2    2.4  2  zf-C4H2        Zinc finger-containing protein
  ------ inclusion threshold ------
      0.035   13.5  15.4       0.18   11.1   2.3    2.4  2  YPEB           YpeB sporulation
       0.13   12.9  21.0      0.064   13.9   2.0    4.1  3  ING            Inhibitor of growth proteins N-terminal histon
       0.18   12.2  17.3       0.32   11.5   1.1    4.6  6  Goodbye        fungal STAND N-terminal Goodbye domain
        2.5    8.3   8.1       0.43   10.8   2.0    2.9  3  HBD            Helical bundle domain
        3.8    7.8   9.4         15    6.0   0.1    4.3  5  DUF948         Bacterial protein of unknown function (DUF948)


Domain annotation for each model (and alignments):
>> zf-C4H2  Zinc finger-containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0  16.2   2.3e-07   0.00069       7     130 ..      42     166 ..      38     220 .. 0.69
   2 ?    0.9   6.3      0.16   4.9e+02      49     123 ..     244     316 ..     216     373 .. 0.71

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 2.3e-07
     zf-C4H2   7 ektleleklknklakevealeke.ekcleeykkelelLeqEkmaHveeLrlIhaDinalEsvikeaeeekekslekakklyeeykk...lkeevnelrs 101
                 +k+++++++ ++l +e ++l++e e+ +++y++e++ L+ Ek++ +e+ r I++  + lE+ +++ +++ e++ +  +++++e ++   + +e+n+  +
  EPX71105.1  42 KKISSMSEKIEHLEAENKVLTAEvEEKIKSYQREMKSLQTEKLEISEQKRHIRERAKGLEKETFKLDSDMEEHRMLQTEILAEHENfqsITNEINQFFN 140
                 577888888888999998877654889*************************************99999988887777766655550005555555555 PP

     zf-C4H2 102 elglekledleeeeeellkeeifekqklk 130
                  lgl+      + ee l +e+ +ek++ +
  EPX71105.1 141 ILGLKDC---PTYEELLEEESQLEKEYDS 166
                 5666655...4455544444444444433 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.16
     zf-C4H2  49 aHveeLrlIhaDinalEsvikeaeeekekslekakklyeeykklkeevnelrselglekledleeeeeellkeei 123
                 + +e++  I++ i+++E+   +  ++  k  e+ k l++++  lk ++ + ++ l  ++  d++e   + +++ei
  EPX71105.1 244 QRAEQIASINQFIEHIETYSTNLSSQDIKYRESSKDLMDKILLLKANLSKSLTLL--REKADQKELSIQNISREI 316
                 4579999**********************************99998876654332..222232333333344444 PP

>> YPEB  YpeB sporulation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   5.4    0.0007       2.1      98     178 ..      22     104 ..      17     175 .. 0.66
   2 ?   11.1   2.3   5.9e-05      0.18      83     173 ..     247     334 ..     244     372 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0007
        YPEB  98 fsyslakkdldgepLteeeyktLeeLyeqakelekeLrkvqekvaegglrwgelekalas..eqekadntiidgnfktvekev 178
                 +s ++ + +++g+ L+++e k+++++ e+ + le+e + + ++v+e+  +++   k+l++   + ++++++i ++ k +eke 
  EPX71105.1  22 YSSEVPVTKTTGNDLSDDELKKISSMSEKIEHLEAENKVLTAEVEEKIKSYQREMKSLQTekLEISEQKRHIRERAKGLEKET 104
                 66666666777777777777777777777777777766666666555555555444444433334444555555555555543 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 5.9e-05
        YPEB  83 lelsktekFLsqvgdfsyslakkdldgepLteeeyktLeeLyeqakelekeLrkvqekvaegglrwgelekalaseqekadntiidgnfkt 173
                 ++++ +++F+++++ +s++l+ +d++ ++ +++ ++++  L+   ++l+k+L  ++ek  +++l+++++ +++++ ++  + ++  ++ ++
  EPX71105.1 247 EQIASINQFIEHIETYSTNLSSQDIKYRESSKDLMDKILLLK---ANLSKSLTLLREKADQKELSIQNISREIEKFSSVRKVEPKVEKYRN 334
                 678899**********************99999999999997...579************************9873333333333332333 PP

>> ING  Inhibitor of growth proteins N-terminal histone-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   4.1    0.0057        17      42      99 ..      49     112 ..      10     114 .. 0.61
   2 ?    2.2   0.1      0.09   2.7e+02      32      71 ..     126     176 ..     122     186 .. 0.78
   3 ?   13.9   2.0   2.1e-05     0.064       4      70 ..     279     343 ..     276     347 .. 0.91

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0057
                 HHHHTS..S-HHHHHHHHH.HHHHHHHHHHHHHHHHHHHHHHHHHH......HHHHHHHHHHCTX CS
         ING  42 ekflkngslqknekeeels.riqeelkeaqelldeKiqlaqqaldl......vdkhlrrLdqdle 99 
                 ek   + + +++    e++ +i++ ++e++ l+ eK+++++q  ++      ++k++ +Ld+d+e
  EPX71105.1  49 EKIE-HLEAENKVLTAEVEeKIKSYQREMKSLQTEKLEISEQKRHIrerakgLEKETFKLDSDME 112
                 2222.322233333333335888888888888888888888766542222226666677776665 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.09
                 HHHHHHHHHHHHHH...........TS..S-HHHHHHHHHHHHHHHHHHHH CS
         ING  32 ellkeidskiekfl...........kngslqknekeeelsriqeelkeaqe 71 
                 e+ ++i ++i++f+           ++  +++ + e+e+ +i+e+l+ a +
  EPX71105.1 126 ENFQSITNEINQFFnilglkdcptyEELLEEESQLEKEYDSINEALQSALP 176
                 667888899999999999988887766667777888888899999988876 PP

  == domain 3  score: 13.9 bits;  conditional E-value: 2.1e-05
                 HHHTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS..S-HHHHHHHHHHHHHHHHHHH CS
         ING   4 dyldsvenLPlelqrnltelreiDakvqellkeidskiekflkngslqknekeeelsriqeelkeaq 70 
                 d++d +  L + l++ lt+lre+  + +  +++i+++iekf+  +  + ++k e++++  ++++e++
  EPX71105.1 279 DLMDKILLLKANLSKSLTLLREKADQKELSIQNISREIEKFS--SVRKVEPKVEKYRNALRNVREVK 343
                 7899999***********************************..77889999999998888888776 PP

>> Goodbye  fungal STAND N-terminal Goodbye domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   1.1   0.00011      0.32       9      53 ..      29      74 ..      28      84 .. 0.78
   2 ?   -1.6   0.1       1.2   3.6e+03      31      51 ..     118     138 ..      75     145 .. 0.57
   3 ?   -1.5   0.0       1.1   3.2e+03      31      62 ..     157     188 ..     127     207 .. 0.59
   4 ?    8.3   0.5     0.001         3       7      65 ..     232     291 ..     229     297 .. 0.88
   5 ?    1.1   0.3      0.18   5.2e+02      17      58 ..     299     339 ..     291     345 .. 0.75
   6 ?   -3.3   0.0       4.1   1.2e+04       6      18 ..     403     415 ..     402     420 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00011
     Goodbye  9 ekeTgkdlkdealkelssvedllkqieaekdkfeefr.ekkeklke 53
                +k+Tg+dl+d++lk++ss+ + ++ +eae++  + +  ek ++ ++
  EPX71105.1 29 TKTTGNDLSDDELKKISSMSEKIEHLEAENKVLTAEVeEKIKSYQR 74
                589***************************9654333255555444 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.2
     Goodbye  31 lkqieaekdkfeefrekkekl 51 
                 + +i ae+++f++ +++ +++
  EPX71105.1 118 QTEILAEHENFQSITNEINQF 138
                 333444444444444443333 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 1.1
     Goodbye  31 lkqieaekdkfeefrekkeklkealkkilspi 62 
                 ++q+e+e+d+ +e  ++     ++l +il  +
  EPX71105.1 157 ESQLEKEYDSINEALQSALPKSKSLLNILCAV 188
                 34555555555544444444444444444444 PP

  == domain 4  score: 8.3 bits;  conditional E-value: 0.001
     Goodbye   7 eyekeTgkdlkdealkelssvedllkqieaekdkfeefr.ekkeklkealkkilspiqll 65 
                  ++ +T++d+ +++ ++++s++++++ ie  + + ++++ + +e+ k+ + kil +  +l
  EPX71105.1 232 AFHLKTQQDILEQRAEQIASINQFIEHIETYSTNLSSQDiKYRESSKDLMDKILLLKANL 291
                 69999*************************999998888788999999999999776666 PP

  == domain 5  score: 1.1 bits;  conditional E-value: 0.18
     Goodbye  17 kdealkelssvedllkqieaekdkfeefrekkeklkealkki 58 
                 +++a ++  s+++++++ie+ ++  ++ + k ek ++al ++
  EPX71105.1 299 REKADQKELSIQNISREIEKFSS-VRKVEPKVEKYRNALRNV 339
                 66677777888888888888877.677778888888877765 PP

  == domain 6  score: -3.3 bits;  conditional E-value: 4.1
     Goodbye   6 keyekeTgkdlkd 18 
                 ++y k Tg++lk+
  EPX71105.1 403 ARYLKLTGRPLKE 415
                 689*******943 PP

>> HBD  Helical bundle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   2.0   0.00014      0.43       4      69 ..      16      85 ..      13      93 .. 0.72
   2 ?   -1.4   0.1      0.86   2.6e+03      49      62 ..     255     268 ..     234     285 .. 0.64
   3 ?   -1.5   0.0      0.95   2.9e+03       7      20 ..     329     342 ..     302     353 .. 0.65

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00014
                HHHHHHHHHHHHTSSSSS-SHHHHHH....HHHHHHHHHHHT-SS--HHHHHHHHHHHHHHHTT---HHH CS
         HBD  4 rylleeYleeLekvkqkddklkstRl....svvkrlaeYLneqtelteevkekiatYvkklremqPaefE 69
                r++ ++Y +e   +k  ++ l    l    s+ +++ +   e   lt+ev+eki++Y ++++  q ++ E
  EPX71105.1 16 RSIKQTYSSEVPVTKTTGNDLSDDELkkisSMSEKIEHLEAENKVLTAEVEEKIKSYQREMKSLQTEKLE 85
                67777888888777777555555444111145555555557999******************99998877 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.86
                 HHHHHHHHHHHHHT CS
         HBD  49 vkekiatYvkklre 62 
                   e+i+tY ++l  
  EPX71105.1 255 FIEHIETYSTNLSS 268
                 44555555555544 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 0.95
                 HHHHHHHHHTSSSS CS
         HBD   7 leeYleeLekvkqk 20 
                 +e+Y ++L +v++ 
  EPX71105.1 329 VEKYRNALRNVREV 342
                 45566666666554 PP

>> DUF948  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.8     0.047   1.4e+02      40      76 ..      42      78 ..       3      94 .. 0.64
   2 ?   -2.3   0.0       1.8   5.4e+03      40      73 ..      95     131 ..      84     140 .. 0.44
   3 ?   -0.8   0.0      0.61   1.8e+03      53      84 ..     164     195 ..     148     196 .. 0.63
   4 ?    6.0   0.1    0.0049        15      53      86 ..     235     268 ..     229     269 .. 0.91
   5 ?    0.5   0.1      0.24   7.2e+02      23      80 ..     290     342 ..     284     350 .. 0.61

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.047
      DUF948 40 kqvdpilkevedllakvnelledvneklekvdpltea 76
                k++ ++++++e l a+ ++l+++v+ek+++ ++ +++
  EPX71105.1 42 KKISSMSEKIEHLEAENKVLTAEVEEKIKSYQREMKS 78
                4445555555555555555555555555554444444 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 1.8
      DUF948  40 kqvdpilkevedllakvne...lledvneklekvdpl 73 
                 ++++++ ke+ +l + ++e   l+ ++  + e+ +++
  EPX71105.1  95 ERAKGLEKETFKLDSDMEEhrmLQTEILAEHENFQSI 131
                 4444444444444444333333333333333333333 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 0.61
      DUF948  53 lakvnelledvneklekvdplteavadlgesv 84 
                  + +ne l+    k++++ ++  av ++++++
  EPX71105.1 164 YDSINEALQSALPKSKSLLNILCAVSNASQNI 195
                 34455566666667777777777777777775 PP

  == domain 4  score: 6.0 bits;  conditional E-value: 0.0049
      DUF948  53 lakvnelledvneklekvdplteavadlgesvse 86 
                 l++ +++le+  e+++++++++e++++ ++++s+
  EPX71105.1 235 LKTQQDILEQRAEQIASINQFIEHIETYSTNLSS 268
                 67788999999********************985 PP

  == domain 5  score: 0.5 bits;  conditional E-value: 0.24
      DUF948  23 klkktldeaaatieelekqvdpilkevedllakvnelledvneklekvdplteavadl 80 
                 +l+k l+ +++  ++ e  +++i++e+e+  + v++    v+ k+ek  +   +v+++
  EPX71105.1 290 NLSKSLTLLREKADQKELSIQNISREIEKFSS-VRK----VEPKVEKYRNALRNVREV 342
                 45666666666666666667777777666532.333....566666666666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (525 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2313  (0.129009); expected 358.6 (0.02)
Passed bias filter:                      659  (0.0367561); expected 358.6 (0.02)
Passed Vit filter:                        80  (0.00446204); expected 17.9 (0.001)
Passed Fwd filter:                        33  (0.00184059); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.88u 0.30s 00:00:01.18 Elapsed: 00:00:00.47
# Mc/sec: 3344.41
//
Query:       EPX71106.1  [L=811]
Description: transcription factor Thi5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.4e-09   35.3   5.7      3e-08   33.6   5.7    1.9  1  Zn_clus   Fungal Zn(2)-Cys(6) binuclear cluster domain
  ------ inclusion threshold ------
       0.01   15.9   0.0      0.027   14.5   0.0    1.6  1  ANAPC8    Anaphase promoting complex subunit 8 / Cdc23


Domain annotation for each model (and alignments):
>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.6   5.7   3.3e-12     3e-08       1      38 [.      36      71 ..      36      73 .. 0.93

  Alignments for each domain:
  == domain 1  score: 33.6 bits;  conditional E-value: 3.3e-12
                SS-HHHHHCT---STSSSS-HHHHHCTHHHCCCCTCCC CS
     Zn_clus  1 haCdnCrkkKvKCdakkPaCsnCkklnleCtfysessk 38
                haC  Cr+kKv+C +k P C +C+ l+ +C+ y+   k
  EPX71106.1 36 HACLGCRSKKVRCTGKEP-CYSCEVLGIQCV-YEVAEK 71
                8*****************.************.987766 PP

>> ANAPC8  Anaphase promoting complex subunit 8 / Cdc23
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0     3e-06     0.027      57      96 ..     139     184 ..     105     240 .. 0.65

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 3e-06
                 .......HHHHHHHHHTHHHHHHHHHHHHTT-HHHHHHH........T CS
      ANAPC8  57 aftankdpeeaaleakeldkYllAkslFDckEfdrcaav........l 96 
                  ++++ +p+e++ e++   + l  k lFDc+E  rc+++        l
  EPX71106.1 139 LYNPTLNPNEETTEKS--TNQLQMKDLFDCREHARCSSYkkssilepL 184
                 5566666666544433..445677**************9666666662 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (811 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1047  (0.058397); expected 358.6 (0.02)
Passed bias filter:                      534  (0.0297841); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.69u 0.28s 00:00:00.97 Elapsed: 00:00:00.44
# Mc/sec: 5565.43
//
Query:       EPX71107.1  [L=173]
Description: acid phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-61  206.9   0.0      2e-61  206.7   0.0    1.0  1  Acid_PPase  Acid Phosphatase
     0.0052   17.1   0.1      0.085   13.1   0.0    2.0  2  Hydrolase   haloacid dehalogenase-like hydrolase
  ------ inclusion threshold ------
      0.013   15.6   1.1      0.059   13.5   0.0    2.2  3  HAD_2       Haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> Acid_PPase  Acid Phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  206.7   0.0   3.3e-65     2e-61       2     169 .]       5     171 ..       4     171 .. 0.98

  Alignments for each domain:
  == domain 1  score: 206.7 bits;  conditional E-value: 3.3e-65
                 --SEEEE-STTTSSSS-TTTSS-S-EEE-TTS..-EEETT--EE---TTHHHHHHHHHHTT--EEEEE--S-HHHHHHHHHHTT-G..........GGE CS
  Acid_PPase   2 lpklivFDLDyTLWpfevdtlvsaplkkeskks.evvDrrgeelklypdveeileelkskevklavaSrtdepdlarelLklleindakekekklldvf 99 
                 +pk +vFDLDyTLWp+++dt+v++p+++ +++   +vDr+g+ +++y++v++il+elk+++vkl +aSrt++p+ a ++L+l+++   +++ +++  +f
  EPX71107.1   5 YPKCVVFDLDYTLWPLWIDTHVTPPFRAAKNDPqVIVDRYGTDITFYKNVTNILQELKDANVKLCIASRTHAPKFAYQVLNLMKVP-IDGELQPASRFF 102
                 8***************************999987889*************************************************.9*********** PP

                 SEEEESSS-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--HHHHHHHHHHHHHH CS
  Acid_PPase 100 ddveiykgsktkhfeklkkktgieyedmlfFDdesrnievesrlgvtfvlvpdGltreefekglkewrkk 169
                 ++++ ++++k+ hfe+l+k+tgi+y+dmlfFDdesrn+ ves lgvtf+lvpdGl+r  fe+g+++w+k+
  EPX71107.1 103 SNIKAFPATKIDHFEQLHKETGIKYKDMLFFDDESRNRVVES-LGVTFCLVPDGLNRASFEEGVRKWQKN 171
                 *****************************************9.************************985 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.1     0.035   2.1e+02       2      13 ..       7      18 ..       6      33 .. 0.87
   2 !   13.1   0.0   1.4e-05     0.085     118     199 ..      49     136 ..      31     139 .. 0.82

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.035
                SEEEEESBTTTB CS
                xxxxxxxxxxxx RF
   Hydrolase  2 ktvvfDkdGTLt 13
                k+vvfD+d TL+
  EPX71107.1  7 KCVVFDLDYTLW 18
                89********98 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 1.4e-05
                 HBHTTHHHHHHHHHHTTEEEEEEE.SSEHHHHHHHHHHTT....GGGE.SEEEEHHCESSTTTSHHHHHHHHHHHTSTGGGEEEEESS CS
                 xxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxx....xxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 118 kvkpeaaeavasLkaagievvllt.gdnpetaeraanqlG....ddyf.daviasdietvakpspegkvaaireLqgkpeevamVGDg 199
                 + ++ +   +++Lk+a++++++++    p++a  ++n +      +   +  + s i+++   + ++++++ +e ++k +++++++D 
  EPX71107.1  49 TFYKNVTNILQELKDANVKLCIASrTHAPKFAYQVLNLMKvpidGELQpASRFFSNIKAFPATKIDHFEQLHKETGIKYKDMLFFDDE 136
                 456779999***************55556777799999999996444457777778888***************************95 PP

>> HAD_2  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.2      0.13   7.7e+02       1       9 [.       9      17 ..       9      24 .. 0.91
   2 ?   13.5   0.0   9.9e-06     0.059      77     109 ..      47      79 ..      32      90 .. 0.84
   3 ?   -2.4   0.0      0.73   4.4e+03     139     162 ..     114     137 ..     103     140 .. 0.70

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.13
       HAD_2  1 iiFDlDgTl 9 
                ++FDlD Tl
  EPX71107.1  9 VVFDLDYTL 17
                79******9 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 9.9e-06
       HAD_2  77 evkpydgvkelLeeLkeagyklgivTsksreav 109
                  +++y++v ++L+eLk+a++kl i++  ++ ++
  EPX71107.1  47 DITFYKNVTNILQELKDANVKLCIASRTHAPKF 79 
                 5899*********************99877665 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 0.73
       HAD_2 139 eviekaleklklkkeeviyvGDsp 162
                 + +e++ +++++k ++++++ D++
  EPX71107.1 114 DHFEQLHKETGIKYKDMLFFDDES 137
                 445666677777777777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       419  (0.02337); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.44
# Mc/sec: 1171.06
//
Query:       EPX71108.1  [L=709]
Description: U3 snoRNP protein Utp4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.7e-10   40.7  17.4       0.17   12.8   0.1    8.3  8  WD40         WD domain, G-beta repeat
    1.1e-08   35.3   2.0       0.13   12.6   0.1    6.0  6  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
     0.0055   16.0   0.0       0.08   12.2   0.0    2.6  3  PSII_BNR     Photosynthesis system II assembly factor YCF48


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.012        74      13      37 ..      25      49 ..       8      50 .. 0.68
   2 !   12.7   0.2   3.2e-05      0.19      10      38 .]     105     138 ..      95     138 .. 0.81
   3 !   12.8   0.1   2.8e-05      0.17      11      38 .]     157     183 ..     147     183 .. 0.83
   4 ?    4.0   0.3     0.018   1.1e+02      13      38 .]     208     232 ..     198     232 .. 0.79
   5 !    7.0   0.0    0.0019        11       3      32 ..     238     268 ..     236     273 .. 0.85
   6 ?    1.0   0.0      0.16   9.4e+02       6      31 ..     289     315 ..     284     319 .. 0.62
   7 ?   -3.4   0.1         3   1.8e+04      31      37 ..     357     363 ..     356     364 .. 0.87
   8 ?    3.0   0.0     0.037   2.2e+02      12      27 ..     488     507 ..     478     514 .. 0.71

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.012
                EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40 13 vtslafspdgawlasGsdDgtvriW 37
                 +s++  p++  la G  +g++ iW
  EPX71108.1 25 LSSQDPLPSNLHLAVGRANGNIEIW 49
                334447777777999*88******* PP

  == domain 2  score: 12.7 bits;  conditional E-value: 3.2e-05
                 S.SS....EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  10 H.ss....vtslafspdgawlasGsdDgtvriWd 38 
                 H +s    ++s++ + + + la+G+dDg++ ++d
  EPX71108.1 105 HqDSnagaIWSISLHEETNTLAAGCDDGSCVLFD 138
                 54224567**********************9998 PP

  == domain 3  score: 12.8 bits;  conditional E-value: 2.8e-05
                 SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  11 ssvtslafspdgawlasGsdDgtvriWd 38 
                 s + sl+++  ++++  G+ Dg v++Wd
  EPX71108.1 157 SRILSLCWQGKNHLV-GGCADGIVKVWD 183
                 458999999999996.7789*******9 PP

  == domain 4  score: 4.0 bits;  conditional E-value: 0.018
                 EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  13 vtslafspdgawlasGsdDgtvriWd 38 
                 v++++  +d++ + +++  g v++W+
  EPX71108.1 208 VWDVKSLKDNTIV-TADSSGAVKFWN 232
                 8999999999997.5644*******8 PP

  == domain 5  score: 7.0 bits;  conditional E-value: 0.0019
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTS CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDg 32 
                 ++++++ H  +v  la+s++g+ ++s++ D+
  EPX71108.1 238 LTQSFKLHsADVLTLAVSSNGNIVFSSGIDR 268
                 56788999777**************999887 PP

  == domain 6  score: 1.0 bits;  conditional E-value: 0.16
                 EEESSSSEEEEEEETTSSE..EEEEETT CS
        WD40   6 tltGHssvtslafspdgaw..lasGsdD 31 
                  +  H +v++++    ++   l+sG+ D
  EPX71108.1 289 RFHSH-DVRCMSILECKTVdvLVSGGAD 315
                 45566.7999953333333658888877 PP

  == domain 7  score: -3.4 bits;  conditional E-value: 3
                 TSEEEEE CS
        WD40  31 DgtvriW 37 
                 D+ v +W
  EPX71108.1 357 DHQVLVW 363
                 99***** PP

  == domain 8  score: 3.0 bits;  conditional E-value: 0.037
                 S....EEEEEEETTSSEEEE CS
        WD40  12 s....vtslafspdgawlas 27 
                 s    +  +++spdg+++a 
  EPX71108.1 488 SacegIATVSVSPDGDYFAI 507
                 33445777889******975 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0     0.095   5.7e+02      29      49 ..      48      77 ..      32     112 .. 0.55
   2 !   11.1   0.0   6.4e-05      0.38      33      76 ..     105     148 ..      72     155 .. 0.79
   3 !   12.6   0.1   2.2e-05      0.13      37      82 ..     155     201 ..     150     212 .. 0.75
   4 ?   -0.5   0.0      0.27   1.6e+03      39      86 ..     202     251 ..     188     257 .. 0.72
   5 ?    1.5   0.0     0.064   3.8e+02      35      60 ..     378     403 ..     351     423 .. 0.65
   6 ?    2.2   0.0     0.039   2.3e+02      36      81 ..     529     575 ..     496     583 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.095
  ANAPC4_WD40 29 vwtl.........eedkedsevrsLaWkpd 49
                 +wt             + +++v++LaW+ +
   EPX71108.1 48 IWTPkgdwclkgvLYGGVNRSVEGLAWSVS 77
                 333333333333333344555555555544 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 6.4e-05
  ANAPC4_WD40  33 eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhsl 76 
                  ++d++ + + s++ +++ + La +++dg++ l+d++ g+ v ++
   EPX71108.1 105 HQDSNAGAIWSISLHEETNTLAAGCDDGSCVLFDISGGRGVIEY 148
                  77899999***************************999877665 PP

  == domain 3  score: 12.6 bits;  conditional E-value: 2.2e-05
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaes..gkvvhslsvksek 82 
                  + s++ sL+W+ +++ L+ +++dg v++ d+es   +++  ++v++ k
   EPX71108.1 155 QTSRILSLCWQGKNH-LVGGCADGIVKVWDVESpnSTIIARMQVDRAK 201
                  678999******988.678***********997225566666666554 PP

  == domain 4  score: -0.5 bits;  conditional E-value: 0.27
  ANAPC4_WD40  39 sevrsLaW...kpdgklLavaysdgevrlldaesgkvvhslsvksekavtc 86 
                  +  rsL W   + +++ ++ a s g+v++ + +  ++ +s++ +s + v +
   EPX71108.1 202 KGSRSLVWdvkSLKDNTIVTADSSGAVKFWNGKYFTLTQSFKLHSAD-VLT 251
                  45567777222346899999999999999999999999999888875.555 PP

  == domain 5  score: 1.5 bits;  conditional E-value: 0.064
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdg 60 
                   ++++++ + a +++g+lLav++ ++
   EPX71108.1 378 LQDEENIVHAAISQNGELLAVSTIQT 403
                  45667788888899999999987654 PP

  == domain 6  score: 2.2 bits;  conditional E-value: 0.039
  ANAPC4_WD40  36 kedsevrsLaWkpd.gklLavaysdgevrlldaesgkvvhslsvkse 81 
                    +s vr++a++ d    Lav+++ ++v  +d++s k+ + ++++s+
   EPX71108.1 529 RVNSFVRAMAFRSDiPGRLAVVTAGNQVFEFDVQSRKLTEWSKTNSN 575
                  5667799999998843579****************999988877765 PP

>> PSII_BNR  Photosynthesis system II assembly factor YCF48
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.17     1e+03     189     226 ..      82     118 ..      73     130 .. 0.74
   2 ?   -0.7   0.0      0.11   6.5e+02      37      67 ..     268     299 ..     228     322 .. 0.62
   3 !   12.2   0.0   1.3e-05      0.08     130     230 ..     475     577 ..     466     592 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.17
                 -EEEEEE-TTS-EEEEETTTEEEEEE.TTEEEEE---B CS
    PSII_BNR 189 rlqnmGfepdgelWllarGgelqfsdeeedeeefseal 226
                 rl ++Gf+   + W l+ G  l  +d +++   +s +l
  EPX71108.1  82 RLFSIGFSTSITEWNLQTGKPLVHQD-SNAGAIWSISL 118
                 78889999999999999998888777.55555666544 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.11
                 TTEEEEESSTTS.S-EE-----S--.--EEEE CS
    PSII_BNR  37 katlletlDGGk.tWeersldleeevnyrles 67 
                 ++t+  t+DGGk +W + s    ++ ++r  s
  EPX71108.1 268 RKTVQYTRDGGKrEWVSNSFRRFHSHDVRCMS 299
                 34555666666534666665555555555544 PP

  == domain 3  score: 12.2 bits;  conditional E-value: 1.3e-05
                 ESSTTSSEEEEE-S----EEEEEE-TTS-EEEEETT.SSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TT..S-EEEEETTTEEEEEE..TTEEEEE-- CS
    PSII_BNR 130 tedagknWkaqveeavGsirniersedGeYvavssr.GnfystwepgqdaWephnressrrlqnmGfepd..gelWllarGgelqfsd.eeedeeefse 224
                 t+ a ++++ +v+ a  +i++++ s+dG+Y a++   Gn +  ++    ++    r +s  +++m f+ d  g+l +++ G ++   d ++++  e+s+
  EPX71108.1 475 TKKAPSKYRGAVQSACEGIATVSVSPDGDYFAIADLhGNTF-CYSFSTLSYIELPRVNS-FVRAMAFRSDipGRLAVVTAGNQVFEFDvQSRKLTEWSK 571
                 788899999************************98527766.68888999999999988.699******9999**********965554889999**99 PP

                 -B-TTS CS
    PSII_BNR 225 alapik 230
                 + ++  
  EPX71108.1 572 TNSNNM 577
                 766654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (709 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       377  (0.0210274); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.28s 00:00:00.90 Elapsed: 00:00:00.44
# Mc/sec: 4878.22
//
Query:       EPX71109.1  [L=598]
Description: inositol polyphosphate phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.2e-84  282.0   1.3      8e-84  281.7   1.3    1.1  1  Syja_N    SacI homology domain
  ------ inclusion threshold ------
       0.02   13.1   0.9      0.029   12.6   0.9    1.1  1  YfhO      Bacterial membrane protein YfhO
      0.034   13.2   0.1      0.057   12.4   0.1    1.2  1  PHO4      Phosphate transporter family


Domain annotation for each model (and alignments):
>> Syja_N  SacI homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  281.7   1.3   1.3e-87     8e-84       2     320 .]      48     334 ..      47     334 .. 0.89

  Alignments for each domain:
  == domain 1  score: 281.7 bits;  conditional E-value: 1.3e-87
      Syja_N   2 gilGlirllsgsyllvitkreevgtlkgkkeiykitevellplsseeeaekalkslkaktekkkeekeleekllklleklfessgsfYFsydlDltrsl 100
                 +i+G i+l+++ yl++ t+r++ +++ g+ +iy+++++e++p          l             +++e  l +ll++ + ++g fYFsy++Dlt+sl
  EPX71109.1  48 TIFGSIKLKKDEYLILATERSSAAQILGH-KIYRVEKFEVIPYMGR------LA-----------TDQDELDLYNLLQNHL-KTGPFYFSYTWDLTNSL 127
                 59***********************8776.************6322......21...........2234667888996556.8**************** PP

      Syja_N 101 qrqlekssesskslplweraderFvWNrhllkpliea.....eldswllpviqGfveqsklklsksqkekekkevtltlisRrsrkraGtRylrRGidd 194
                 qr+++++    +++p ++r d+rF+WN++  k++i+a     e+ s+++p+i+Gf+ +s++        +++++vtl+lisRrs++raGtRy++RGid+
  EPX71109.1 128 QRSCAEE----TKNPNVSRSDNRFFWNEFASKNFIQAvqahpEAASFVTPMIYGFITSSST-------MVKGRSVTLALISRRSKFRAGTRYFTRGIDE 215
                 ****963....44445789****************666667899************44333.......356789************************* PP

      Syja_N 195 eGnvANfvEtEqilevessekeskilSfvqiRGSiPlfWsqeptlkykpkirierseeenleafkkHfekllkrYgkvvvvnLlekkgrEkkLgeayek 293
                 +Gn ANf E Eqi  v+ +++++ ++S+vq+RGS+P +W + ++l+y+p++   +s + +++a++kHf+++++ Yg++++vnL++ kg+E ++++ ye+
  EPX71109.1 216 NGNPANFNEVEQITIVS-DDRSEITYSHVQTRGSVPAYWAEVNDLRYRPRMIT-NSASLATRAAQKHFDEQIAIYGDQILVNLVNCKGHELPVKQVYEN 312
                 ***************76.5566789*************************777.5999999************************************** PP

      Syja_N 294 avkklnklekekkklkyveFDfhkeck 320
                 +v++l+     +++++y +FDfhkec+
  EPX71109.1 313 VVRRLD-----NPRIHYHYFDFHKECS 334
                 *****8.....8**************5 PP

>> YfhO  Bacterial membrane protein YfhO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.9   4.8e-06     0.029     239     337 ..     464     566 ..     460     568 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 4.8e-06
        YfhO 239 llsskrasaeatisltfdinpldllsklligtfdfeqmgs..lpniyvgllpllllilyFvlkkiklkeklaf..allllllilsfllpplnlvwhgfq 333
                 +++s + +  ++++    +  +dl+   +i +++f+ + +    +i+++  +ll+++++F+ + +++ +  +    +llll +l++l  +++ + hg+q
  EPX71109.1 464 FVNSAKRYILNNFYDGARQDAYDLVLGRFIPSSNFHYRLDlrPLTIRCMPYVLLTCVFLFFFSLFSRSSTAVLppHILLLLSFLGVLTSAFYCFSHGMQ 562
                 6677777777888888889999999999999*****9999854578899999999999999999998876554237888999***************** PP

        YfhO 334 aPvg 337
                 ++++
  EPX71109.1 563 YVNW 566
                 **97 PP

>> PHO4  Phosphate transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   9.6e-06     0.057     152     207 ..     507     562 ..     484     566 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 9.6e-06
        PHO4 152 nalralpvlvlvtiailalsilfkgeskkddeeteklfkflqvvsaalvsfahGan 207
                   +r +p+++l++++++ +s++ + ++ +  +++  l++fl v+++a+ +f+hG++
  EPX71109.1 507 LTIRCMPYVLLTCVFLFFFSLFSRSSTAVLPPHILLLLSFLGVLTSAFYCFSHGMQ 562
                 45788998888888888888888887779999**********************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (598 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       590  (0.0329076); expected 358.6 (0.02)
Passed bias filter:                      480  (0.0267723); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.25s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 4093.34
//
Query:       EPX71110.1  [L=518]
Description: aspartate kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-41  143.1   0.1    2.5e-41  141.9   0.0    1.6  2  AA_kinase  Amino acid kinase family
    3.9e-11   42.5   0.4    4.7e-08   32.7   0.1    3.0  3  ACT        ACT domain
    4.9e-11   42.2   1.2    1.6e-09   37.4   0.2    2.7  2  ACT_7      ACT domain


Domain annotation for each model (and alignments):
>> AA_kinase  Amino acid kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.9   0.0   4.1e-45   2.5e-41       2     241 .]      15     304 ..      14     304 .. 0.84
   2 ?   -2.2   0.0      0.42   2.5e+03      32      93 ..     437     494 ..     400     509 .. 0.58

  Alignments for each domain:
  == domain 1  score: 141.9 bits;  conditional E-value: 4.1e-45
                 EEEEEE-TTCCCCTCCHHHHHHHHHHHHHHHHTTEEEEEE--H.......HHHHHHHHH......TCCCCCHHHC...................E..HH CS
   AA_kinase   2 rvVvKlGGssltdkeeaslrrlaeqiaalkesgnklvvVhGgg.......sftdgllal......ksglssgelaa...............glrstlee 72 
                 +vV K+GG+s++    ++  ++a ++a+   +++++v+V++++       ++t++l+++      ++        +               +       
  EPX71110.1  15 WVVQKFGGTSIG----KFPLKIAVDVAKSYLENKRVVLVCSARstdtkaeGTTNRLIRAaeqalkQHST------SydivtaieqdhlqavR------- 96 
                 79**********....44457777777777************6688899999****9996443331111......12223334333333340....... PP

                 HHHHHHH........................................HHHHHHHHHHHHHHHHTTHGEEEE-GGGTCEECCCE......HHHTTTCEEE CS
   AA_kinase  73 agevatr........................................dalaslgerlvaallaaglpavglsaaaldateagr....degsdgnvesvd 127
                       +                                        d+++ +gerl+ +++a  l+++g++a+++d+          +  d+  +s+ 
  EPX71110.1  97 ------DfigdveiqerlfkeirhdcaeleqylnairilteisprtrDLVLGMGERLSCRFMAGVLQDQGVDAEYVDMCHILDehkeWKSLDASFYSYV 189
                 ......15555566666666777888888999999999****************************************999888777677788888888 PP

                 CCHHHHHHHT.T.-EEEEESEEEEETTTE...EEEE-HHHHHHHHHHHCTSSEEEEEESSSSCESSTTTTCCTTCECCEEEHHHCHHCSSS.TTTHHHH CS
   AA_kinase 128 aeaieellea.g.vvpvltgfigldeege...lgrgssDtiaallAealgAdkliiltdVdGVydadpkkvpdarllpeisvdeaeesaselatgGmkv 221
                 a++++  +   g +vpv+tgf+g+ +      +grg +D +aallA+ l Ad+l i+++VdG+++adp+kvp+arllp i+ +ea+e    l+++G +v
  EPX71110.1 190 ANQLAANVTVlGnKVPVVTGFFGMVPGSLlsqIGRGYTDFCAALLAVGLAADELQIWKEVDGIFTADPRKVPTARLLPLITPEEAAE----LTYYGSEV 284
                 ****999988855*******997776666899*******************************************************....******** PP

                 CHHHHHHHHHCTT-EEEEEE CS
   AA_kinase 222 khpaalaaarrggipvvItn 241
                 +hp ++  + +++ip++I+n
  EPX71110.1 285 IHPFTMSQVISARIPIRIKN 304
                 ******************98 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.42
                 HHTTEEEEEE--HHHHHHHHHHTCCCCCHHHC....E..HHHHHHHHHHHHHHHHHHHHHHH CS
   AA_kinase  32 esgnklvvVhGggsftdgllalksglssgelaaglrstleeagevatrdalaslgerlvaal 93 
                  ++++ +v ++g  + + l+++  +++ +++  +  s  ++   + ++ a+ +l+ ++ + l
  EPX71110.1 437 GKHMRNAVGISG-RMFNTLAEA--KINIEMIS-QGASEINISCVIDEKNAVKALNCIHKELL 494
                 333444555555.555555555..55555555.44444555555555566666665555555 PP

>> ACT  ACT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.69   4.1e+03      36      52 ..     162     174 ..     156     176 .. 0.77
   2 !    6.7   0.0     0.001       6.1      11      38 ..     371     398 ..     369     414 .. 0.90
   3 !   32.7   0.1   7.9e-12   4.7e-08       6      65 ..     439     492 ..     434     494 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.69
                 ESTTECEEEEEEEEEEH CS
         ACT  36 sedkvagivfvvivvde 52 
                 +    a++v+++++ de
  EPX71110.1 162 D----AEYVDMCHILDE 174
                 3....899*****9998 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.001
                 TTHHHHHHHHHHHTTSEEEEEEEEEEST CS
         ACT  11 PGlLarvfgaladrgiNidsieqrssed 38 
                 +G La +f+++ ++ + +d i +++++ 
  EPX71110.1 371 HGFLASIFAIFDKYKLAVDLIITSEVHV 398
                 69*********************99976 PP

  == domain 3  score: 32.7 bits;  conditional E-value: 7.9e-12
                 EEESSTTHHHHHHHHHHHTTSEEEEEEEEEESTTECEEEEEEEEEEHHHHHHHHHHHHTT CS
         ACT   6 gvpDrPGlLarvfgaladrgiNidsieqrssedkvagivfvvivvdeedleevlealkkl 65 
                 ++++ +G+ +r f++la++ iNi++i+q+ s      ++++ +v+de+++ ++l+ ++k 
  EPX71110.1 439 HMRNAVGISGRMFNTLAEAKINIEMISQGAS------EINISCVIDEKNAVKALNCIHKE 492
                 799****************************......99****************99985 PP

>> ACT_7  ACT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.1     0.017        99       2      30 ..     353     380 ..     352     399 .. 0.86
   2 !   37.4   0.2   2.6e-13   1.6e-09       5      65 .]     429     491 ..     426     491 .. 0.96

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.017
                 EEEEEEEEEE-S-.---SS--HHHHHHHH CS
       ACT_7   2 sedgwiklsvvgsglpfdvtGivaklasp 30 
                 ++d++ ++++ +++  +++ G++a++++ 
  EPX71110.1 353 IKDTIMVININSNRK-ISSHGFLASIFAI 380
                 6899*********65.56*******9975 PP

  == domain 2  score: 37.4 bits;  conditional E-value: 2.6e-13
                 EEEEEEE-S-.---SS--HHHHHHHHHHTTT---EEEE...-SS-EEEEEEGGGHHHHHHHHHH CS
       ACT_7   5 gwiklsvvgsglpfdvtGivaklaspLaeagIsifqiS...tyrtdyiLVpeedlekAveaLhe 65 
                 g++ ls+vg  ++  ++Gi  ++++ Laea+I+i +iS   +++ ++++++e+++ kA+++ h+
  EPX71110.1 429 GMAILSLVGKHMRN-AVGISGRMFNTLAEAKINIEMISqgaSEINISCVIDEKNAVKALNCIHK 491
                 6789******9999.**********************************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (518 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       667  (0.0372023); expected 358.6 (0.02)
Passed bias filter:                      579  (0.032294); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.29s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 3569.23
//
Query:       EPX71111.1  [L=608]
Description: pescadillo-family BRCT domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   1.8e-126  421.3   0.7   1.8e-126  421.3   0.7    2.2  2  Pescadillo_N  Pescadillo N-terminus
    3.7e-07   30.5   0.0    8.9e-07   29.2   0.0    1.7  1  BRCT_2        BRCT domain, a BRCA1 C-terminus domain


Domain annotation for each model (and alignments):
>> Pescadillo_N  Pescadillo N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  421.3   0.7    2e-130  1.8e-126       1     265 [.       6     270 ..       6     278 .. 0.98
   2 ?   -5.9   7.4         2   1.8e+04      46      92 ..     562     607 ..     548     608 .] 0.75

  Alignments for each domain:
  == domain 1  score: 421.3 bits;  conditional E-value: 2e-130
  Pescadillo_N   1 kkkkegeakkyitrkqalkkLqlslkdFRrLCilKGiyPrepkkkkkankgstaaktyYyakdikfLlhepilekfreikafakklkkalakkekek 97 
                   +k+k+g+a+ yitr+qalkkLq++l+dFRr+CilKG+yPrepk+kkkankgsta+ t+Yy+kdi++Llhep+++kfre+k+f++kl+ka++k+e ++
    EPX71111.1   6 QKGKTGAARVYITRNQALKKLQVTLADFRRICILKGVYPREPKNKKKANKGSTAPVTFYYSKDIQYLLHEPVVQKFREYKTFVRKLSKAIGKGELDT 102
                   6999********************************************************************************************* PP

  Pescadillo_N  98 akrleknkpkykldhiikeRYPtfidAlrdldDaLsliflfatlpktkkikekliekcerlaeefqayviksrslrkvFlSiKGiYyqaeikgqkvt 194
                   akrle+nkp y+ldhiikeRYPtf+dA++d+dDaLs++flf+t+p t+ki + ++++cerl++efq+yvi+++slrk+FlSiKGiYyqa+i g +vt
    EPX71111.1 103 AKRLENNKPVYHLDHIIKERYPTFHDAIKDIDDALSMLFLFSTMPVTDKIGAATVANCERLCAEFQQYVIRTHSLRKTFLSIKGIYYQADIFGVEVT 199
                   ************************************************************************************************* PP

  Pescadillo_N 195 WlvPykfaqklekdvdfkvmltflefYetllkfvnfkLykslnlkyppkldeekdekaaelealsleekas 265
                   W+vPykf+q++++dvdf++m tflefY++l++fvnfkL++s++l+yppkld +k+e+aa l+a+ lee++s
    EPX71111.1 200 WIVPYKFSQNVPTDVDFRIMHTFLEFYQSLMGFVNFKLFNSIGLRYPPKLDVAKSESAAGLAAYDLEESNS 270
                   *******************************************************************9876 PP

  == domain 2  score: -5.9 bits;  conditional E-value: 2
  Pescadillo_N  46 kkankgstaaktyYyakdikfLlhepilekfreikafakklkkalak 92 
                    k+   s ++++ Y + + + +++e+  +++r++k   +k kka+a+
    EPX71111.1 562 SKMMM-SNKQRKLYNKLENANIKKENYNNNLRNKKKEIQKNKKAKAN 607
                   33333.56778888888999999999999999999999999998875 PP

>> BRCT_2  BRCT domain, a BRCA1 C-terminus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.2   0.0     1e-10   8.9e-07       4      84 ..     354     441 ..     351     442 .. 0.78

  Alignments for each domain:
  == domain 1  score: 29.2 bits;  conditional E-value: 1e-10
      BRCT_2   4 lFeglrFYindaepspsreklkklIeknGGevveti..........tsavyiviaesneee...laekrkrrvvspkyIkdCikkgkllpleny 84 
                 l  +++FY+     +  r  l+ +I+++GG+v  ++          ++    vi+++ ++    ++++++r +v+p++++d+++kg+l   + y
  EPX71111.1 354 LLAPFTFYL---SREVPRFSLEFVIRAFGGKVAWDPvlgggspyaeSDP---VITHHISDRphlAQKYEGRVYVQPQWVYDSVNKGRLERTDLY 441
                 67899****...566789**************88888888888764333...3333333334559**********************9766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (608 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2488  (0.13877); expected 358.6 (0.02)
Passed bias filter:                      514  (0.0286686); expected 358.6 (0.02)
Passed Vit filter:                        77  (0.00429472); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.82u 0.30s 00:00:01.11 Elapsed: 00:00:00.48
# Mc/sec: 3816.21
//
Query:       EPX71112.1  [L=613]
Description: nucleolar protein Dnt1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.3e-14   53.9   0.4    2.6e-14   52.9   0.4    1.5  1  Cytokin_check_N  Cdc14 phosphatase binding protein N-terminus
  ------ inclusion threshold ------
        0.3   11.1   8.2       0.16   11.9   4.4    2.7  2  AT_hook          AT hook motif


Domain annotation for each model (and alignments):
>> Cytokin_check_N  Cdc14 phosphatase binding protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.9   0.4   2.9e-18   2.6e-14       3      66 ..      18      81 ..      16      84 .. 0.96

  Alignments for each domain:
  == domain 1  score: 52.9 bits;  conditional E-value: 2.9e-18
  Cytokin_check_N  3 kFLhltdpsntleelseeiverfkklYPdeeeleIlslqdenecDLDpdflvkdvFesdnlvrv 66
                     +F++l d+ + +++++++i++++k+lYPd+ ++ + +++de+++D++++++++d+F+ ++ v v
       EPX71112.1 18 QFILLCDRASFVNDVKQKIQSTYKSLYPDKGDISVINIKDEENYDIPNEYCIGDIFHGNSKVLV 81
                     79*******************************************************9997765 PP

>> AT_hook  AT hook motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1      0.42   3.7e+03       6      12 ..     137     143 ..     137     144 .. 0.79
   2 ?   11.9   4.4   1.8e-05      0.16       1      10 [.     594     603 ..     594     606 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.42
     AT_hook   6 RPrKaat 12 
                 RPr +++
  EPX71112.1 137 RPRSSSS 143
                 9*98875 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 1.8e-05
     AT_hook   1 kRkRGRPrKa 10 
                 kR+RGRPrK+
  EPX71112.1 594 KRGRGRPRKS 603
                 8********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (613 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2090  (0.116571); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                       135  (0.0075297); expected 17.9 (0.001)
Passed Fwd filter:                        58  (0.00323498); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.75u 0.40s 00:00:02.15 Elapsed: 00:00:00.58
# Mc/sec: 3206.25
//
Query:       EPX71113.1  [L=771]
Description: MCM complex subunit Mcm7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   7.7e-105  349.0   0.0   1.2e-104  348.3   0.0    1.3  1  MCM              MCM P-loop domain
    2.3e-32  111.5   0.1      4e-32  110.7   0.1    1.4  1  MCM_OB           MCM OB domain
    1.3e-19   70.7   0.4    3.6e-19   69.3   0.4    1.8  1  MCM_N            MCM N-terminal domain
    4.7e-19   68.6   0.4    1.4e-18   67.1   0.4    1.9  1  MCM_lid          MCM AAA-lid domain
    1.6e-07   30.9   0.0    1.2e-05   24.7   0.0    2.6  3  Mg_chelatase     Magnesium chelatase, subunit ChlI
    7.4e-07   29.2   0.0    1.8e-06   28.0   0.0    1.7  1  AAA_5            AAA domain (dynein-related subfamily)
  ------ inclusion threshold ------
      0.011   15.6   0.0      0.038   13.8   0.0    2.0  1  AAA_3            ATPase family associated with various cellul
      0.051   13.5   0.2        1.8    8.4   0.1    2.6  2  NTPase_1         NTPase
       0.06   13.1   0.0       0.52   10.0   0.0    2.1  2  Sigma54_activat  Sigma-54 interaction domain


Domain annotation for each model (and alignments):
>> MCM  MCM P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  348.3   0.0  6.2e-108  1.2e-104       3     224 .]     357     578 ..     355     578 .. 0.99

  Alignments for each domain:
  == domain 1  score: 348.3 bits;  conditional E-value: 6.2e-108
                 HHHHHHHTSSTHHHHHHHHSSTTSSS-HHHHHHHHHHHH---EBBBSSSSBBCSS-EEEEEESSTSTHHHHHHHHHHHSSSEEEEESSSSSSSHSSSEE CS
         MCM   3 eeikelakekdiieklvksiapsiyghedvkkaillqlfggvkkkledktklrgdinvllvgdpgtaKsqlLkyveklapravytsgkgssaagLtaav 101
                 ++i el+k  +++ekl+ksiap+iyghedvkka+ll+l+ggv+k l d++++rgdinv+l gdpg+aKsqlLky++k+apr+vyt+g+gss++gLtaav
  EPX71113.1 357 ATIAELHKGGNVYEKLAKSIAPEIYGHEDVKKALLLLLVGGVTKVLGDGMRIRGDINVCLTGDPGVAKSQLLKYISKVAPRGVYTTGRGSSGVGLTAAV 455
                 6899*********************************************************************************************** PP

                 EEESSSSSEEEEETHHHHTTTSEEEEESGGGSTCHHHHHHHHHHHHSEEEEESSSCEEEEE--EEEEEEE--SSSSCCTTS-HHHHSSSSHHHHHHSSE CS
         MCM 102 vrdeetgefvleaGalvladkGvcciDefdkmkeedrsalhEamEqqtisiaKaGivatLnartsvlaAanpkagrydkkksvaeninlsaalLsrFDl 200
                 +rd+ t+e+vle+Galvlad+G+cciDefdkm+e+dr+a+hE+mEqqtisi+KaGi++tLnarts+laAanp +gry++k   ++ninl+aalLsrFD+
  EPX71113.1 456 MRDPVTDEMVLEGGALVLADNGICCIDEFDKMDESDRTAIHEVMEQQTISISKAGITTTLNARTSILAAANPLYGRYNPKVAPIHNINLPAALLSRFDV 554
                 *************************************************************************************************** PP

                 EEEE-SSTTHHHHHHHHHHHHHHH CS
         MCM 201 ifvllDkvdeekDeelaehivslh 224
                 +f++lD++++e+De+la+h++ +h
  EPX71113.1 555 LFLILDTPSRETDEHLAQHVTYVH 578
                 ********************9876 PP

>> MCM_OB  MCM OB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.7   0.1     2e-35     4e-32       2     124 ..     185     315 ..     184     317 .. 0.92

  Alignments for each domain:
  == domain 1  score: 110.7 bits;  conditional E-value: 2e-35
                 XGG--GGGTTSEEEEEEEEEEE---EEEEEEEEEEETTT-.-EEES---....-S.B-..TTT-HHH...-EEE-GGGSEEEEEEEEEEE--------- CS
      MCM_OB   2 lRdlrsehigklvkveGivtrasevkpklkkavfeckkcgktvevelee....Pr.kCeekeCeskd...pfkletekskfvdfqklklQEspeevpaG 92 
                 +Rdlr e++g+lv+++Gi+tr+s+vkp+l   +++c++cg++v  ++++    P  +C+++eC+++d   ++ ++t+ skf  fq++k+QE +++vp G
  EPX71113.1 185 VRDLRGENLGSLVTLRGIITRTSDVKPSLIVNAYTCDRCGYEVFQQIRQktflPItECPSDECRKNDakgQLFMSTRASKFLAFQEVKIQELTNQVPIG 283
                 8****************************************8887666667787559*******5555559999************************* PP

                 ----EEEEEEEGGGTT---TT-EEEEEEEEEE CS
      MCM_OB  93 elPrslevileddlvdkvkPGdrvevtGiyra 124
                 ++Pr+++v+l++ ++++v+PGd v+v Giy  
  EPX71113.1 284 HIPRTITVHLYGAITRTVNPGDIVDVSGIYLP 315
                 *****************************975 PP

>> MCM_N  MCM N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.3   0.4   1.8e-22   3.6e-19       1     104 []      17     175 ..      17     175 .. 0.86

  Alignments for each domain:
  == domain 1  score: 69.3 bits;  conditional E-value: 1.8e-22
       MCM_N   1 qekFedFLeefk..........................ddsededge............kkYrdqlqemaerekttLevdlddLaafde...eLaeail 58 
                 q+k+ dFL++fk                          +       e             kY+d lq++a+r+++ +++dl+dL++fd+   +L  +i+
  EPX71113.1  17 QHKITDFLSHFKqevaplatsagaafqnregfdeddllM-------EdiesaengpmlrAKYMDILQDVANRKRNVITIDLNDLYEFDPsdsKLLSNIE 108
                 6899********999999999999877666655555541.......0555556678888****************************98889******* PP

       MCM_N  59 enpkeylplleealkevv..kklepsykdd...................akefpaeltrrfqvrfkn 104
                 +n+k++++l++++++ ++  ++++ +yk++                   ++ fp+eltr + ++f++
  EPX71113.1 109 RNTKRFVELFSQCVDSLMppPTVDINYKNEvldvimqqrlqrnenldpeQSGFPPELTRGYDLYFYP 175
                 ******************555566699999**********9999887644***************96 PP

>> MCM_lid  MCM AAA-lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.1   0.4     7e-22   1.4e-18       2      86 ..     595     681 ..     594     682 .. 0.93

  Alignments for each domain:
  == domain 1  score: 67.1 bits;  conditional E-value: 7e-22
                 HHHHHHHHHHHTT--BETCHHHHHHHHHHHHHHHHH...TSSTSSSST--HHHHHHHHHHHHHHHHHHTSSSE-HHHHHHHHHHHHHH CS
     MCM_lid   2 llrkYiayarekikPklseeakeklseaYvelRkee...edskrksipitvRqLesliRLseAlAklrlsevvteedveeairllkes 86 
                 ++r+Yi+ ar +++P++ +++ e+++ aYv+lR+++   e s+r+   +t+R+L  ++R+ +AlA+lr+s++v+ +dv+ea+rl+  s
  EPX71113.1 595 MIRHYISAAR-QYRPVVPKHVCEYVTGAYVQLRQNQkrdEASERQFSHTTPRTLLGILRMGQALARLRFSHTVEISDVDEALRLMAVS 681
                 689*******.***********************99755334899999*************************************876 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0      0.03        59      20      48 ..     409     437 ..     405     442 .. 0.88
   2 !   24.7   0.0   6.3e-09   1.2e-05      98     159 ..     467     528 ..     460     542 .. 0.93
   3 ?   -3.5   0.0       2.7   5.4e+03      29      71 ..     689     730 ..     670     742 .. 0.67

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.03
  Mg_chelatase  20 aGgHnlllvGppGsGKtmlakrlpsllpp 48 
                    G  n+ l+G pG  K+ l k ++++ p+
    EPX71113.1 409 RGDINVCLTGDPGVAKSQLLKYISKVAPR 437
                   58889****************99998875 PP

  == domain 2  score: 24.7 bits;  conditional E-value: 6.3e-09
  Mg_chelatase  98 kpGeislahnGvLfLDElpefkrkvlevLRePledgevtisrakakvefparfqlvaamNpc 159
                   + G++ la nG+  +DE+ +++++   ++ e +e+++++is+a  +++  ar+ ++aa+Np 
    EPX71113.1 467 EGGALVLADNGICCIDEFDKMDESDRTAIHEVMEQQTISISKAGITTTLNARTSILAAANPL 528
                   67999*******************************************************95 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 2.7
  Mg_chelatase  29 GppGsGKtmlakrlpsllpplseeealevakiasvagkkeeek 71 
                     pG   t + +++ +++ ++ ++ + + ++ +s++ +   ++
    EPX71113.1 689 LDPGYHDTTITSKIYKIIRDMLNNASTDEESGSSLSLRA-IRE 730
                   568888999999999999999988888888877777633.333 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   0.0     9e-10   1.8e-06       1     126 [.     413     531 ..     413     552 .. 0.81

  Alignments for each domain:
  == domain 1  score: 28.0 bits;  conditional E-value: 9e-10
                 EEEEE--SSSSHHHHHHHGGGGB.S--EEEEE--TT--HHHHH--B--.........--------G-SEEEEESGGG--HHHHHHHHHHHHSSEEE..- CS
       AAA_5   1 dvlLvGppGtgKselaerlaaal.nreveyvqltrdtteedlkgrreikngttslvdsplvraaregeilvlDEveraesevlnsLlslleerrlllee 98 
                 +v+L G+pG++Ks+l ++++++  +  +++  ++++   +  ++r  +  ++ +l+ ++lv       i+++DE+++++ +   + + ++e++++++ +
  EPX71113.1 413 NVCLTGDPGVAKSQLLKYISKVApRGVYTTGRGSSGVGLTAAVMRDPV-TDEMVLEGGALV--LADNGICCIDEFDKMDESDRTAIHEVMEQQTISISK 508
                 69*********************8777777788877665555555554.688889999999..77889***********99999************999 PP

                 SSSEEE---......-EEEEEESS--.- CS
       AAA_5  99 ggelvkaknddllerfrviatanpldrs 126
                  g  +  ++      ++++a+anpl+++
  EPX71113.1 509 AGITTTLNAR-----TSILAAANPLYGR 531
                 9988888775.....8********9933 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   1.9e-05     0.038       3     113 ..     415     528 ..     413     552 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1.9e-05
       AAA_3   3 llegvPGlaktllvkalakaldlefkriqftpdllPsdilGtevfeekekefefkkGpvf...anllladeinrappktqsalleameerqvtve..ge 96 
                  l+g PG+ak +l k ++k+    +             ++ + + +  + e+ ++ G+++   + +   de ++     ++a+ e+me+++++++  g 
  EPX71113.1 415 CLTGDPGVAKSQLLKYISKVAPRGVYTTGRG--SSGVGLTAAVMRDPVTDEMVLEGGALVladNGICCIDEFDKMDESDRTAIHEVMEQQTISISkaGI 511
                 6778888888888888887655433222222..223345555666667788888888865322348899*********************998862257 PP

       AAA_3  97 thklpepflvlatqnPi 113
                 t++l+    +la+ nP+
  EPX71113.1 512 TTTLNARTSILAAANPL 528
                 999*************7 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.1   0.00093       1.8       1      30 [.     413     441 ..     413     449 .. 0.80
   2 ?    2.2   0.0     0.074   1.5e+02      94     126 ..     474     509 ..     460     540 .. 0.72

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00093
                 EEEEE--TTSSHHHHHHHHHHHH...GGGE CS
    NTPase_1   1 kvfiTGppGvGKtTlvkkvlellkssgvkv 30 
                 +v++TG pGv K+ l+k ++++   +gv  
  EPX71113.1 413 NVCLTGDPGVAKSQLLKYISKVA-PRGVYT 441
                 589************99888765.555555 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.074
                 HHH-EEEE---STTGGG-HHHHHHH..HHHHT.TTS CS
    NTPase_1  94 seadviviDEiGkmElkskkfkeav..eevLk.sek 126
                  +++++ iDE  km  + ++ +++v  +++++ s+ 
  EPX71113.1 474 ADNGICCIDEFDKMDESDRTAIHEVmeQQTISiSKA 509
                 5678**********8887766666533356663443 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.29   5.9e+02      20      46 ..     409     435 ..     403     442 .. 0.84
   2 ?   10.0   0.0   0.00026      0.52      86     142 ..     468     526 ..     461     531 .. 0.90

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.29
                      TSSS-EEEECSTTSSHHHHHHHHHHHS CS
  Sigma54_activat  20 ktdlsvlitGesGtGKellaraiheas 46 
                      + d++v +tG+ G+ K+ l + i +  
       EPX71113.1 409 RGDINVCLTGDPGVAKSQLLKYISKVA 435
                      56899************9999887765 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00026
                      EHHHHHTTTSEEEEETGGGS-HHHHHHHHHHHHHSEE..ESBTSSSEEE--EEEEEEES CS
  Sigma54_activat  86 kGlfekadgGtlfLDeigelplelQekLlrvlqegev..ervGsskeikvdvriiaatn 142
                       G++  ad+G+  +De  +++ +  + + +v++++++  ++ G +++ ++ + i+aa+n
       EPX71113.1 468 GGALVLADNGICCIDEFDKMDESDRTAIHEVMEQQTIsiSKAGITTTLNARTSILAAAN 526
                      59999****************************997522799**********9999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (771 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       625  (0.0348597); expected 358.6 (0.02)
Passed bias filter:                      589  (0.0328518); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.66u 0.28s 00:00:00.94 Elapsed: 00:00:00.44
# Mc/sec: 5265.05
//
Query:       EPX71114.1  [L=389]
Description: ribonucleotide reductase small subunit Suc22 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     1e-115  386.0   0.5   1.3e-115  385.7   0.5    1.1  1  Ribonuc_red_sm  Ribonucleotide reductase, small chain


Domain annotation for each model (and alignments):
>> Ribonuc_red_sm  Ribonucleotide reductase, small chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  385.7   0.5  7.1e-120  1.3e-115       1     279 []      73     341 ..      73     341 .. 0.98

  Alignments for each domain:
  == domain 1  score: 385.7 bits;  conditional E-value: 7.1e-120
                     TT-TTS-SSHHHHHHHHHHHCT---GGGS-GHHHHHHHHSTS-HHHHHHHHHHHHHHHHHHHHHHHCHHHCHHCCBSSHHHHHHHHHHHHHHHHH CS
  Ribonuc_red_sm   1 rfvlfpikypeiwelykkleanfWtpeevdlskDlkdwkekLsedekefikkvlaflalldtivnenlverllsevqipearafygfqaamEniH 95 
                     rfvlfpi+y+eiw++ykk+ea+fWt+ee+dlskDl dw++kL+ de+ fi++vla +a++d+ivnenl+er++sevqipear++ygfq+++EniH
      EPX71114.1  73 RFVLFPIQYHEIWQFYKKAEASFWTAEEIDLSKDLIDWDTKLNADERYFISTVLAYFAASDGIVNENLLERFSSEVQIPEARCVYGFQIMIENIH 167
                     79********************************************************************************************* PP

                     HHHHHHHHHHHT.-HHHHHHHHCHHHH-HHHHHHHHHHHHHHCTTTSCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTTSSHHHHHHHHHHHHH CS
  Ribonuc_red_sm  96 aesYsllletlvkdekekdelfnaieenpalqkkaewikkwyeskkdeekfaerlvafallegilfysgFaailwlkkrgllpglaeiielilrD 190
                     +e+Yslll+t+++d+kek++ f+ai ++ ++++ka+w+ +w+++ ++  ++a rlvafa++egi+f+++Fa+i+wlkkrgl+pgl++++eli+rD
      EPX71114.1 168 SETYSLLLDTYIRDPKEKERHFDAILTMGSITAKAKWAIRWINDPDS--NYAIRLVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELICRD 260
                     *******************************************8884..699******************************************* PP

                     HHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT.BTTCHHHHHHHHHHHHHHHHHHCTT---SS-TT---C CS
  Ribonuc_red_sm 191 eglHtdfagllfkelkeenelenkeleeeveelikeavelEkefitdalpvellglnkedvkqYieyvadrllmnlgyeklYnveeenP 279
                     eglHtdfa+l+f++l  +    +++ ++ ve++i eav++Eke+ tdalp +llg+nk++++qYie+vadrll++lg ek+Ynv  +nP
      EPX71114.1 261 EGLHTDFACLMFSHL--K----HRPGRKIVEAIIVEAVDIEKEYFTDALPASLLGMNKDLMCQYIEFVADRLLVSLGNEKYYNV--TNP 341
                     ***************..5....55************************************************************..998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (389 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       437  (0.0243739); expected 358.6 (0.02)
Passed bias filter:                      369  (0.0205812); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2798.53
//
Query:       EPX71115.1  [L=554]
Description: N2,N2-dimethylguanosine tRNA methyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     1e-149  498.8   0.0   1.3e-149  498.5   0.0    1.0  1  TRM           N2,N2-dimethylguanosine tRNA methyltransferase
    1.4e-05   24.9   0.1    2.5e-05   24.1   0.1    1.3  1  Met_10        Met-10+ like-protein
  ------ inclusion threshold ------
       0.03   13.2   0.0      0.047   12.5   0.0    1.2  1  DUF917        Protein of unknown function (DUF917)
      0.067   12.9   6.9       0.35   10.6   1.1    2.4  2  Rubredoxin_2  Rubredoxin metal binding domain
       0.08   13.0   0.0        5.7    7.0   0.0    2.7  2  CpXC          CpXC protein
       0.57   10.3   2.6        3.3    7.9   0.0    2.8  3  zf-Mss51      Zinc-finger of mitochondrial splicing suppresso


Domain annotation for each model (and alignments):
>> TRM  N2,N2-dimethylguanosine tRNA methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  498.5   0.0  4.3e-153  1.3e-149       7     376 .]      29     475 ..      18     475 .. 0.95

  Alignments for each domain:
  == domain 1  score: 498.5 bits;  conditional E-value: 4.3e-153
                 E----SS--TT--SS--GGGHHHHHHHHHH....HHHHHHHH-S-...................................................... CS
         TRM   7 vedkevtvskkeeVFYNPvqefnRDlsvlvir.qlellkkklgek...................................................... 50 
                 +  +++ +++ +eVFYNPvq+fnRDls ++ir + e +++k + k                                                      
  EPX71115.1  29 EGSATILFNDPDEVFYNPVQQFNRDLSTTAIRtWAESRDEKAVLKakhrqeiiealdkknenegkgksensspsrseettapaeneknkgtktdgssnv 127
                 33344669*********************************988899**************************************************** PP

                 .EEEEESS-TTSHHHHHHHHH-S-EEEEEEE-S-HHHHHHHHHHHHHTT--GGEEEE-S-HHHHHC--SS-EEEEEE--SS--GGGHHHHHHHEEEEEE CS
         TRM  51 .ikvldaLsasGlRaiRfalEvpgvkevlaNDisekAvelikeNvklneveeivvineddAnvllaekkkrfdviDlDPfGspapfldsavqsvkekgl 148
                  +++l+aLsa+GlRaiR+a+E+p+vk++laND++ +Av+ i  Nvk n+v++ivv+n++dAn+++++ k+++dviDlDP+G+++pfldsavqsv+++gl
  EPX71115.1 128 gFNILEALSATGLRAIRYAKELPNVKKILANDLLARAVDAIDANVKRNDVAHIVVPNKGDANAVMHSFKNQYDVIDLDPYGTATPFLDSAVQSVANNGL 226
                 *************************************************************************************************** PP

                 EEEEE--HHHHTT.SSHHHHHHHHSSB---STTHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETTEEEEEEEEEE-HHHHHHHHTTEEEEEEETTT. CS
         TRM 149 LlvTaTDtavLaG.aspekclrkYgavalkselcHEvalRillkavareaakYekavepllslsadfYvrvfvkvktgaakvkkvleklglvlhCsgC. 245
                 L++T+TD+avLaG a+pekc+++Yg+++l+s++cHE+a+R+ll+a+a++aakY +a++p+lsls+dfY+rvfv+v+t++a vk++ ++++++++CsgC 
  EPX71115.1 227 LCITCTDSAVLAGnAYPEKCFSNYGGTSLRSDFCHEQAVRHLLYAIAMAAAKYGRAIKPMLSLSVDFYFRVFVQVETKPALVKDLHRQSAIIYQCSGCg 325
                 *************99***********************************************************************************9 PP

                 .................--EEEE--GGG--........SB-TTT-SBEEEEEEEE-S-S--HHHHHHHHHHHCT..-TTS..-HHHHHHHHHHHHHHS- CS
         TRM 246 .................lseekvkglakfk........aecehcgaklhlaGPlwlgplkdkefveevleeaekekeeel..kkrvkklLklikeElld 317
                                           +k+         a+cehcg+ +h++GP+w gpl+d+efve++ ++ae  +e+++  k+r++++L+++ eEl+d
  EPX71115.1 326 snalqymgktvpgripgS--------TKYTnatgppvsAKCEHCGYVHHVGGPVWGGPLHDAEFVERMRKIAEGLDEKTYgtKRRILGMLAVVAEELPD 416
                 999888777555444432........333355555555************************************99999999***************** PP

                 -SS-EEHHHHHHHHT-SS---HHHHHHH....TT-EE-TTSTTEEE-SS-HHHHHHHHH CS
         TRM 318 aplyydlsqlasvlklsvpplkkvvsalkelgfevsrtHakpkaikTnapleavvevlr 376
                 +p+y+++sq+asvl+ ++pp++++vsal+++g+++s++Hak++aikT+ap++ +++++r
  EPX71115.1 417 KPFYFVISQIASVLRAQSPPQNTFVSALLNAGYRASGSHAKSNAIKTDAPWSYIWDIMR 475
                 **********************************************************7 PP

>> Met_10  Met-10+ like-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.1   8.3e-09   2.5e-05     115     198 ..     142     228 ..     120     229 .. 0.85

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 8.3e-09
                 HHHCCH.HTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG---..TT-EEEEEE--TTTGGGGHHHHHHHEEEEEEEE CS
      Met_10 115 aipiak.yskakrvlaidlnPesvkylkeniklNkvekvvkpileDgrevir..eqladrvvmnlpksaieFldkvlaalkdggvih 198
                 ai  ak + + k++la+dl  ++v  +  n+k+N+v+++v p ++D++ v++  +++ d + ++   +a+ Fld++++ + ++g+ +
  EPX71115.1 142 AIRYAKeLPNVKKILANDLLARAVDAIDANVKRNDVAHIVVPNKGDANAVMHsfKNQYDVIDLDPYGTATPFLDSAVQSVANNGLLC 228
                 5555552456789**************************************96677777777777899**********999998877 PP

>> DUF917  Protein of unknown function (DUF917)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.6e-05     0.047      65     149 ..     152     234 ..     148     282 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.6e-05
                 TT-SS-HH....HHHHHHHHHT--.EEEEE-SSSSCCHHHHHHHHHHHHT-EEESB-SSSS--SSGGGSHHHHTT----SEEEE-S CS
      DUF917  65 eeklpsgdelleavealekllgrk.idavislEiGGlNglvallaaaklglpvvDaDgmGRAfPelqqttfavagisltPlalade 149
                 ++k++++d l +av+a+   ++r+ +++++  + G +N++   + + k +  v+D D  G A P l+    +va+  l+ ++++d+
  EPX71115.1 152 VKKILANDLLARAVDAIDANVKRNdVAHIVVPNKGDANAV---MHSFKNQYDVIDLDPYGTATPFLDSAVQSVANNGLLCITCTDS 234
                 5788899999*********999989***********9865...78899999******************99999888777776665 PP

>> Rubredoxin_2  Rubredoxin metal binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   1.1   0.00012      0.35       1      16 [.     319     334 ..     319     334 .. 0.97
   2 ?    5.3   0.5    0.0054        16       3      11 ..     358     366 ..     357     367 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00012
  Rubredoxin_2   1 YvCsqCGfesakwfGr 16 
                   Y+Cs CG+ + +++G+
    EPX71115.1 319 YQCSGCGSNALQYMGK 334
                   9**************7 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.0054
  Rubredoxin_2   3 CsqCGfesa 11 
                   C++CG++++
    EPX71115.1 358 CEHCGYVHH 366
                   ******997 PP

>> CpXC  CpXC protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.0    0.0019       5.7      17      46 ..     298     327 ..     290     332 .. 0.88
   2 ?    2.7   0.0     0.041   1.2e+02      37      53 ..     355     371 ..     349     387 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0019
        CpXC  17 sidadedpelkeklldgslfeatCpkCgat 46 
                  ++++++p l+++l  +s   ++C  Cg +
  EPX71115.1 298 FVQVETKPALVKDLHRQSAIIYQCSGCGSN 327
                 68999***********************86 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.041
        CpXC  37 eatCpkCgatakleapl 53 
                 +a+C++Cg+ +++  p+
  EPX71115.1 355 SAKCEHCGYVHHVGGPV 371
                 789******99987765 PP

>> zf-Mss51  Zinc-finger of mitochondrial splicing suppressor 51
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.3       1.4   4.2e+03      39      54 ..      75      91 ..      72      91 .. 0.80
   2 ?    0.9   0.0      0.16   4.9e+02      10      23 ..     312     325 ..     303     329 .. 0.80
   3 ?    7.9   0.0    0.0011       3.3      13      51 ..     352     389 ..     342     391 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 1.4
    zf-Mss51 39 ahle.icdtLrqvnede 54
                +h++ i+++L + ne+e
  EPX71115.1 75 KHRQeIIEALDKKNENE 91
                46666*****9999987 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.16
    zf-Mss51  10 tapkhvdfeCpdCG 23 
                 + ++ + ++C  CG
  EPX71115.1 312 HRQSAIIYQCSGCG 325
                 4678899******9 PP

  == domain 3  score: 7.9 bits;  conditional E-value: 0.0011
    zf-Mss51  13 khvdfeCpdCGiptycseehwedDyeahleicdtLrqvn 51 
                  +v+ +C +CG++ ++    w    +   e+++++r++ 
  EPX71115.1 352 PPVSAKCEHCGYVHHVGGPVWGGPLH-DAEFVERMRKIA 389
                 57899**********99999987776.777888888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (554 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       910  (0.0507558); expected 358.6 (0.02)
Passed bias filter:                      609  (0.0339673); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.61u 0.30s 00:00:00.90 Elapsed: 00:00:00.44
# Mc/sec: 3740.27
//
Query:       EPX71116.1  [L=583]
Description: RNA helicase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-08   34.5   0.0    4.1e-08   33.2   0.0    1.6  2  DEAD      DEAD/DEAH box helicase
     0.0033   17.4   0.0       0.02   14.9   0.0    2.2  2  ResIII    Type III restriction enzyme, res subunit


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.2   0.0   4.6e-12   4.1e-08       1     135 [.     118     267 ..     118     288 .. 0.77
   2 ?   -3.5   0.0      0.83   7.5e+03     141     168 ..     302     331 ..     292     333 .. 0.54

  Alignments for each domain:
  == domain 1  score: 33.2 bits;  conditional E-value: 4.6e-12
                 -HHHHHHHHHHHTTC.EEEEEESTTSSHHHHHHHHHHHHHHHS......TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTST....SEEEEEETTSSHH CS
                 xxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxx RF
        DEAD   1 tdiQaeaiplilggg.dvlvaaeTGsGKTlaflipvlqivyet......kgktgpkalivePtreLaeqtlnnlkkfkkyid....lrvlliiggvaar 88 
                 t +Q ++i + l ++  ++v+a  GsGK+  +l +v++  y+       ++++g ++liv+P + La+q    ++k+         l+  + i +v+  
  EPX71116.1 118 THVQVRIIRASLMNRfPFMVRAWNGSGKSFSALAAVMSFYYQFldkftsETEHGCQVLIVVPNKNLAQQYQAWVEKLATGGPlqepLKKISQILEVSL- 215
                 5789999999886665999*************999997666669999999****************************97441133333333333444. PP

                 HHHHHHHTT.CSEEEEEHHHHHHHH..HCTSSH..CTTEEEEEEETHHHHHH CS
                 xxxxxxxxx.xxxxxxxxxxxxxxx..xxxxxx..xxxxxxxxxxxxxxxxx RF
        DEAD  89 dqlskldng.vdivvgtpgrlddll..stgkln..lsqvrflVlDEadrlld 135
                 + l++++++ + + ++  + l +l   +   l+  l +++++++DE d +  
  EPX71116.1 216 SRLEDIKRDlPFLCIAEYEDLERLKglNHPILDhiLPNLKTIIFDESDLYIP 267
                 44555544468888899999988776544445577*************8765 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 0.83
                 HHHHHHHHSHHHCTTSTTT..SEEEEEESS CS
                 xxxxxxxxxxxxxxxxxxx..xxxxxxxxx RF
        DEAD 141 finrilnqlpqitcdgklq..rqvivlSAT 168
                  in+ l+++++ ++ ++ +   ++i+lSAT
  EPX71116.1 302 RINTELSEIEREKNMKSGSwlPNLIFLSAT 331
                 445545555433333332222349999999 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   2.2e-06      0.02      23     118 ..     131     240 ..     113     262 .. 0.61
   2 ?   -1.7   0.0      0.29   2.6e+03      55      81 ..     439     470 ..     427     504 .. 0.54

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 2.2e-06
                 TTSEEEEEESTTSTHHHHH.HHHHHHH-S.............-EEEEESSHHHHHHHHHHGGGGTGG.........GEEEESSS-B--........... CS
      ResIII  23 rdkrglikmaTGtGKTlva.aklierllkkgkee........kflflvprkslleqtleefkkflseayke.....igkkvsgdkkka....kekdstn 103
                 ++  +++ +  G+GK++ a a+++  +++  ++         ++l++vp+k+l +q +  ++k++     +     i+++++     +    + ++++ 
  EPX71116.1 131 NRFPFMVRAWNGSGKSFSAlAAVMSFYYQFLDKFtsetehgcQVLIVVPNKNLAQQYQAWVEKLATGGPLQeplkkISQILEV----SlsrlEDIKRDL 225
                 56678889999******99666666566555544888*******************998887776555443333322222222....122223344555 PP

                 -SEEEEEHHHHHHTH CS
      ResIII 104 kkilvttiqsldads 118
                   +++++++ l + +
  EPX71116.1 226 PFLCIAEYEDLERLK 240
                 566666666665555 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.29
                 ......-EEEEESSHHHHHHHHHHGGGGTGG. CS
      ResIII  55 e.....kflflvprkslleqtleefkkflsea 81 
                 +     ++l++vp++  ++   e+++++  ++
  EPX71116.1 439 KfapkkNILIVVPKEFDVSWFCERYERIGTTP 470
                 23333499999998755555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (583 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       490  (0.02733); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.45
# Mc/sec: 3872.82
//
Query:       EPX71117.1  [L=199]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-16   59.9   0.0    2.5e-16   59.2   0.0    1.3  1  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
  ------ inclusion threshold ------
      0.064   13.3   0.1       0.19   11.8   0.0    1.8  2  DUF4214   Domain of unknown function (DUF4214)


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.2   0.0   2.8e-20   2.5e-16       1      69 [.      65     134 ..      65     134 .. 0.98

  Alignments for each domain:
  == domain 1  score: 59.2 bits;  conditional E-value: 2.8e-20
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrel 69 
                 +fV+nL+++vt+e + e+F+ +G+i+si+++   + ++++gf++V++  +++A +A++++n+ +l+g el
  EPX71117.1  65 VFVENLTRNVTREHIAEIFGIYGRINSIDMPLYrKSKSNMGFCYVDYSYPDQALNAVDKMNNGELDGEEL 134
                 8*****************************************************************9876 PP

>> DUF4214  Domain of unknown function (DUF4214)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.1e-05      0.19      28      60 ..      50      81 ..      34      84 .. 0.90
   2 ?   -2.7   0.1      0.73   6.5e+03      37      44 ..     189     196 ..     186     198 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.1e-05
     DUF4214 28 YqnvldRepDsaGlnywadqLksgaetReevll 60
                Y+  + R+pD ++   ++++L   + tRe+++ 
  EPX71117.1 50 YSRSVSRSPDRSETTVFVENLTRNV-TREHIAE 81
                9999*********************.****986 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.73
     DUF4214  37 DsaGlnyw 44 
                 Ds G++y+
  EPX71117.1 189 DSMGYAYY 196
                 999***99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       539  (0.030063); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 1395.61
//
Query:       EPX71118.1  [L=330]
Description: ribosomal protein subunit S4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.2e-11   41.5   1.3    9.2e-11   41.3   0.0    1.8  2  S4        S4 domain
    0.00027   20.7   0.0    0.00046   20.0   0.0    1.3  1  S4_2      S4 domain


Domain annotation for each model (and alignments):
>> S4  S4 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.3   0.0     1e-14   9.2e-11       2      48 .]      97     143 ..      96     143 .. 0.94
   2 ?   -3.0   0.4      0.71   6.4e+03      16      22 ..     280     286 ..     276     286 .. 0.84

  Alignments for each domain:
  == domain 1  score: 41.3 bits;  conditional E-value: 1e-14
                 EHHHHHHHTTSSSSHHHHHHHHHTTTEEETTEEE--TT-EE-TTCEE CS
          S4   2 RLdkvlarlglassrreArqlIehGrVlVNGkvvkdpsyrVkpgDvi 48 
                 RLd  ++r+ +ass  +Arql+ hG+V+VNG + k     +kpgD +
  EPX71118.1  97 RLDMSIHRAMFASSALQARQLVVHGKVYVNGLPEKRSYRALKPGDLV 143
                 9**********************************888888899976 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 0.71
                 HHHHHHH CS
          S4  16 rreArql 22 
                 rr+A++l
  EPX71118.1 280 RRQAKRL 286
                 9***997 PP

>> S4_2  S4 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   5.1e-08   0.00046      21      59 ..     109     147 ..      98     151 .. 0.89

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 5.1e-08
        S4_2  21 esGgeaKafiaegeVkvNGevetrRgkKlraGdvVeidg 59 
                 +s  +a++++  g+V vNG  e+r  + l +Gd+V++d 
  EPX71118.1 109 SSALQARQLVVHGKVYVNGLPEKRSYRALKPGDLVTVDP 147
                 56669*******************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       930  (0.0518713); expected 358.6 (0.02)
Passed bias filter:                      592  (0.0330191); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 2477.88
//
Query:       EPX71119.1  [L=414]
Description: mannose-1-phosphate guanyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.8e-29  101.2   0.0      9e-29  100.8   0.0    1.2  1  NTP_transferase  Nucleotidyl transferase
    2.1e-09   36.8   4.4    6.3e-05   22.5   0.2    3.9  3  Hexapep          Bacterial transferase hexapeptide (six repea
    4.9e-08   33.5   0.0    1.4e-07   32.0   0.0    1.8  2  NTP_transf_3     MobA-like NTP transferase domain
    2.1e-07   30.3   2.3    4.8e-06   25.8   2.3    2.4  1  Fucokinase       L-fucokinase
  ------ inclusion threshold ------
      0.082   11.6   0.1        1.6    7.4   0.0    2.3  2  Oxidored_nitro   Nitrogenase component 1 type Oxidoreductase
       0.13   10.4   0.0       0.21    9.7   0.0    1.4  1  DUF4954          Domain of unknown function (DUF4954)
       0.15   11.8   0.1       0.75    9.5   0.0    2.2  3  IspD             2-C-methyl-D-erythritol 4-phosphate cytidyly
       0.15   11.8   0.5        2.4    8.0   0.0    3.1  4  Hexapep_2        Hexapeptide repeat of succinyl-transferase


Domain annotation for each model (and alignments):
>> NTP_transferase  Nucleotidyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.8   0.0     4e-32     9e-29       2     211 ..       5     214 ..       4     265 .. 0.85

  Alignments for each domain:
  == domain 1  score: 100.8 bits;  conditional E-value: 4e-32
                      EEEE--S..--GGGTTCCTTSSGGGSEETTETETTHHHHHHHHH.TT-SEEEEEEETTTHHHHHHHHTTSGGGT....SEEEEEEESS--BGGH CS
  NTP_transferase   2 avILaGG..sGtRLwPLtrtlakklvpvlgkerliqatlsrlan.sgieeiivvltqehsflveeqlkegskfg....vevlialepegkgtAd 88 
                      avIL+GG  +GtR++PL+ +++k+l+ ++g   +i++ l++l++ +++++ ++ +  +++  +++ ++e s ++     +++++ e +  gt +
       EPX71119.1   5 AVILVGGpsRGTRFRPLSFDVPKPLFKIGGR-EMIYHHLQALSKiESVKD-VFLVGFYEESVFKDFIHEVS-VEfpmfHRIKYLREYNCLGTGG 95 
                      8******888*********************.************888888.77777677777777777776.566787899999999999**** PP

                      HHHHTHHHHTTSSE..EEEEETTEEEESTTHHHHHHHHHTHSSTTSEEEEEEESS-CTTSEEEEEC.TTSBEEEEECS-SSHSHCSEECCSEEE CS
  NTP_transferase  89 AvalaaelledeksdelvlvLggDhlikdayeeavkkaiekaakgtvtfgivpveeateyGviead.eegrverfvEKPkeakaselassGiYv 181
                       ++ +++ + + +  ++v+v+ +D+ ++  ++e++++++ek+a +t++   v++e+a+++G+   d +++rv + v KP+    s+++s G+Y+
       EPX71119.1  96 GLYHFRDQILKGH-TDNVFVMHADVCCSFPLNELLQSHEEKNALVTLMATKVNKEDASNFGCLVEDpNTNRVLHYVDKPSSYL-SNIISCGVYL 187
                      **********999.69***************************66777777778999****999996777***********99.********** PP

                      EETTHHHHHHHCCHHHTTSSCHHHHHHHHH CS
  NTP_transferase 182 fnsevllflakdleelkrgedeitdilpka 211
                      f+ ++++++    + ++r+ +e+++ l+ +
       EPX71119.1 188 FDASIFDEIK---KAYERRIEEVEKQLRSL 214
                      ********94...56666666666666554 PP

>> Hexapep  Bacterial transferase hexapeptide (six repeats)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.2   2.8e-08   6.3e-05       8      34 ..     288     314 ..     282     316 .. 0.93
   2 !    7.2   0.0    0.0019       4.2       2      35 ..     323     355 ..     313     356 .. 0.81
   3 !    6.4   0.1    0.0035       7.7       2      34 ..     367     399 ..     366     401 .. 0.88

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 2.8e-08
                 EEE-TTEEEETTEEE-TTEEEETTEEE CS
     Hexapep   8 vlIgpfaviggnVkIGdnvkIgagvvi 34 
                 v+I+p a++  ++kIG+nv Iga+v++
  EPX71119.1 288 VFIHPSATVSRGAKIGPNVFIGAHVRV 314
                 89***********************98 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0019
                 EEEETTEEE-TTEEEETTEEE-TTEEEETTEEEE CS
     Hexapep   2 tvIGsnvlIgpfaviggnVkIGdnvkIgagvvig 35 
                 ++I +++ + + avi++ + + +n++Ig ++++ 
  EPX71119.1 323 SIIQEDCEVSSQAVILHSI-LSRNCRIGKWSRVE 355
                 6788889999988888888.88888888877775 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.0035
                 EEEETTEEE-TTEEEETTEEE-TTEEEETTEEE CS
     Hexapep   2 tvIGsnvlIgpfaviggnVkIGdnvkIgagvvi 34 
                 t+  ++v++ + +v g+++ ++d v++ ++ v+
  EPX71119.1 367 TIMRNHVKVQAITVMGADCNVHDEVRVQNCLVL 399
                 567799*********************998765 PP

>> NTP_transf_3  MobA-like NTP transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.0   0.0   6.4e-11   1.4e-07       1     123 [.       5     144 ..       5     219 .. 0.70
   2 ?   -2.1   0.1         2   4.5e+03      36      66 ..     372     402 ..     362     410 .. 0.75

  Alignments for each domain:
  == domain 1  score: 32.0 bits;  conditional E-value: 6.4e-11
                   EEEEEES..S-TTTT..T...THHHHCCCCCCHHHHHHHHHCTT..-CEEEEECSHCHHHHHHTTC............TS-EEE-TTSS-SHHHHHH CS
  NTP_transf_3   1 aviLAGG..rSsRmg..g...dKallplggkpllervldalraag.vdevvvvggdeevlaalarl............gvrvvededpgkgplasla 77 
                   aviL GG  r++R+   +   +K+l ++gg+ ++ ++l+al++ + v++v++vg +ee    ++++            +++++++ +   g++++l+
    EPX71119.1   5 AVILVGGpsRGTRFRplSfdvPKPLFKIGGREMIYHHLQALSKIEsVKDVFLVGFYEESV--FKDFihevsvefpmfhRIKYLRE-YNCLGTGGGLY 98 
                   79*****77778997442567***********************559*******997432..22332223333333345777776.4589******* PP

                   HHHHH.H..SSSCEEEEETT-TT--HHHHHHHHHCHHHHTSSEEEEES CS
  NTP_transf_3  78 aalra.aa.dadavlvlacDmPlltpelverllaaaaasgadvvvpty 123
                   +  ++ ++ ++d v+v+ +D+ +  +  +++ll+++++++a v+  ++
    EPX71119.1  99 HFRDQiLKgHTDNVFVMHADVCC--SFPLNELLQSHEEKNALVTLMAT 144
                   *****62269**********987..45588888888877775543333 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 2
                   TT.-CEEEEECSHCHHHHHHTTCTS-EEE-T CS
  NTP_transf_3  36 aagvdevvvvggdeevlaalarlgvrvvede 66 
                   +++v+ ++v g d +v+++++ +++ v++ +
    EPX71119.1 372 HVKVQAITVMGADCNVHDEVRVQNCLVLPHK 402
                   3478999999999999999988888887765 PP

>> Fucokinase  L-fucokinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   2.3   2.1e-09   4.8e-06      48     335 ..     108     380 ..      97     399 .. 0.68

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 2.1e-09
  Fucokinase  48 mkpGvlvtssDvlllf..dseeisfdka....gvtalavpstldigtnHGVfvlddqsseeeeleirsvkkflhKpseeelqasgavlkdekvlldsGv 140
                     v+v+ +Dv   f  +  e+  +++     vt +a++ + + ++n G  v d++         ++v +++ Kps+  l++           + +Gv
  EPX71119.1 108 HTDNVFVMHADVCCSFplN--ELLQSHEeknaLVTLMATKVNKEDASNFGCLVEDPN--------TNRVLHYVDKPSS-YLSN----------IISCGV 185
                 5666778888877766442..222222222446777777777888888888777777........5778888888875.4552..........677888 PP

  Fucokinase 141 vffdhktaekLlklyk.eskpLdcetylg......slkidlYgDfLqaLgsaateeyfknssnvtkeeeslreareel.wnlLkgtpLnvillnnskFy 231
                 ++fd +++ +  k y+  ++ +++ +  +      +  ++l  D+L++L+s++++  f    n +++  ++++a +++  n L+ ++     +++++  
  EPX71119.1 186 YLFDASIFDEIKKAYErRIEEVEKQL--RslddgmEDYLSLEDDVLAPLCSDSSKAIFA--YNTPEFWRQIKTAGSAVpANSLYLQK----AYHDGNLP 276
                 88888888888888873344444442..2468888888888888888888888888888..77777778888877555223333222....33456666 PP

  Fucokinase 232 Hlgttaeylehltkdaslkeel..sltstafsaiknkkekkkesavvinSvlessvsvgegsviehsslkgnvsigsnsivsglelesseeslelpddt 328
                    t ae ++ +  ++s  +++  ++ +++f  +   +   +++a + nS+++++++v+ ++vi hs l+ n++ig++s v g     s++s ++  ++
  EPX71119.1 277 SPDTEAEIIQPVFIHPSATVSRgaKIGPNVFIGA---HVRVDDGARIRNSIIQEDCEVSSQAVILHSILSRNCRIGKWSRVEGSPTLPSQHSTTIMRNH 372
                 6677788887777777766666445556665544...334499*****************************************999998844443333 PP

  Fucokinase 329 i.lqtlsl 335
                 + +q + +
  EPX71119.1 373 VkVQAITV 380
                 31444444 PP

>> Oxidored_nitro  Nitrogenase component 1 type Oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0     0.041        92     344     389 ..      53      98 ..      37     104 .. 0.82
   2 ?    7.4   0.0    0.0007       1.6      10      54 ..     105     151 ..     103     157 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.041
                     SEEEE-CCHHHHHHHTT--EEE-TS-ECCTTTCS.S---SHHHHHHH CS
  Oxidored_nitro 344 dlllggskeryiaeklgiplvrvgfPildrhgya.rgpyvGYeGaln 389
                     d++l g +e  +++++ i+ v v fP++ r +y  ++   G  G l 
      EPX71119.1  53 DVFLVGFYEESVFKDF-IHEVSVEFPMFHRIKYLrEYNCLGTGGGLY 98 
                     899999999*******.****************97888888777765 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0007
                     HTTBTTEEEEEES-HHHHHCCCCHHHCHHSS-H..S-EEEE--HHHH CS
  Oxidored_nitro  10 llgikdalplvhGpqGCatyaralltrhfrepi..plastdltekda 54 
                     l+g +d + ++h+ ++C++  ++ll +h+ ++    l+ t+++ +da
      EPX71119.1 105 LKGHTDNVFVMHADVCCSFPLNELLQSHEEKNAlvTLMATKVNKEDA 151
                     6788899***********************88877888898888876 PP

>> DUF4954  Domain of unknown function (DUF4954)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   9.2e-05      0.21     228     271 ..     305     348 ..     284     403 .. 0.86

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 9.2e-05
     DUF4954 228 dfiissGskikdgavisrcfvGqavklkkqfsaedsllfaNcqg 271
                 ++ i +  ++ dga i ++++ + ++++ q+ +  s+l  Nc++
  EPX71119.1 305 NVFIGAHVRVDDGARIRNSIIQEDCEVSSQAVILHSILSRNCRI 348
                 45566667889999999999999999999999999999999976 PP

>> IspD  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.0   0.00034      0.75      10      63 ..      14      69 ..       5      76 .. 0.77
   2 ?   -2.4   0.1       1.4   3.2e+03      94     119 ..     311     334 ..     305     341 .. 0.78
   3 ?   -3.5   0.0       3.1   6.9e+03      23      53 ..     352     384 ..     350     394 .. 0.69

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00034
                SSCT...T-SSS-GGGSEETTEEHHHHHHHHHHCTTTEEEEEEEE-GGGHHHHHHHH CS
        IspD 10 sGkR...mkaglpKqflelkgqtllehtvdallaskavdkivvvvseddteefeqll 63
                +G+R   +  ++pK ++++ g+ ++ h ++al + ++v+ + +v   ++ + f+++ 
  EPX71119.1 14 RGTRfrpLSFDVPKPLFKIGGREMIYHHLQALSKIESVKDVFLVGFYEE-SVFKDFI 69
                56662234679******************************99987666.6666655 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.4
                 EEEE--TT-TT--HHHHHHHHHHHHT CS
        IspD  94 fVLvHDaARpllkaadiaellaaaeq 119
                  V v D+AR  ++++ i+e +++++q
  EPX71119.1 311 HVRVDDGAR--IRNSIIQEDCEVSSQ 334
                 577999999..888888888887775 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 3.1
                 SEETTEEHH..HHHHHHHHCTTTEEEEEEEE-G CS
        IspD  23 lelkgqtll..ehtvdallaskavdkivvvvse 53 
                   ++g + l  +h+ + + ++ +v+ i v+  +
  EPX71119.1 352 SRVEGSPTLpsQHSTTIMRNHVKVQAITVMGAD 384
                 566666666445777888888888888887654 PP

>> Hexapep_2  Hexapeptide repeat of succinyl-transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.0    0.0011       2.4       8      28 ..     288     310 ..     287     316 .. 0.78
   2 ?    6.1   0.2    0.0041       9.3       3      14 ..     301     312 ..     299     333 .. 0.77
   3 ?   -1.3   0.0      0.83   1.9e+03       7      12 ..     345     350 ..     344     354 .. 0.82
   4 ?   -1.9   0.0       1.3   2.9e+03       5      11 ..     382     388 ..     379     390 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0011
                 -EE-TT-EE..SEEE-TT-EE-T CS
   Hexapep_2   8 CliGanagi..GvslGdncvvga 28 
                 ++i+++a++  G ++G n+ +ga
  EPX71119.1 288 VFIHPSATVsrGAKIGPNVFIGA 310
                 58888888888888888888877 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0041
                 EE-TT-EE-TT- CS
   Hexapep_2   3 iIGdnCliGana 14 
                 +IG n++iGa  
  EPX71119.1 301 KIGPNVFIGAHV 312
                 799999999865 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 0.83
                 T-EE-T CS
   Hexapep_2   7 nCliGa 12 
                 nC iG+
  EPX71119.1 345 NCRIGK 350
                 999996 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 1.3
                 -TT-EE- CS
   Hexapep_2   5 GdnCliG 11 
                 G++C+++
  EPX71119.1 382 GADCNVH 388
                 9999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (414 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       750  (0.0418317); expected 358.6 (0.02)
Passed bias filter:                      686  (0.038262); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 2990.17
//
Query:       EPX71120.1  [L=270]
Description: peroxisomal docking protein Pex14 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-21   77.6   1.9    1.7e-15   58.0   0.2    3.8  2  Pex14_N          Peroxisomal membrane anchor protein (Pex14p)
     0.0022   17.6   3.2     0.0024   17.5   3.2    1.2  1  Exonuc_VII_L     Exonuclease VII, large subunit
     0.0045   16.1   0.4     0.0065   15.6   0.4    1.3  1  Emaravirus_P4    P4 movement protein of Emaravirus, and the 3
     0.0075   15.2   5.5     0.0094   14.9   5.5    1.2  1  LMBR1            LMBR1-like membrane protein
     0.0088   16.0   0.9     0.0088   16.0   0.9    2.2  2  DUF1759          Protein of unknown function (DUF1759)
  ------ inclusion threshold ------
      0.016   15.0  17.1      0.028   14.3  17.1    1.3  1  ERM              Ezrin/radixin/moesin family
      0.019   12.5  13.2      0.024   12.2  13.2    1.1  1  DUF3584          Protein of unknown function (DUF3584)
      0.062   12.7   6.3      0.089   12.1   6.3    1.3  1  FAM76            FAM76 protein
       0.12   10.9   3.3       0.15   10.6   3.3    1.1  1  FUSC             Fusaric acid resistance protein family
       0.16   12.4  12.0       0.29   11.6   2.0    2.9  2  Enkurin          Calmodulin-binding
       0.17   11.3   5.7       0.24   10.8   5.7    1.2  1  ECH_2            Enoyl-CoA hydratase/isomerase
       0.17   10.8   9.3       0.35    9.8   9.1    1.5  1  Vps53_N          Vps53-like, N-terminal
        0.3    9.8   3.7       0.46    9.2   3.7    1.3  1  DUF3573          Protein of unknown function (DUF3573)
       0.31   11.1   8.0          2    8.6   2.7    2.7  2  Med9             RNA polymerase II transcription mediator com
       0.32   10.5  18.6        1.2    8.7   7.3    2.1  2  HAUS-augmin3     HAUS augmin-like complex subunit 3
       0.38   11.0   6.8         12    6.2   6.8    2.6  1  DUF948           Bacterial protein of unknown function (DUF94
       0.63   10.1  12.9        0.4   10.7   2.1    3.0  2  Ribosomal_L29    Ribosomal L29 protein
       0.65   10.0   7.9        1.2    9.2   6.9    1.9  2  DUF1664          Protein of unknown function (DUF1664)
       0.67   10.1  14.4       0.11   12.6   9.5    1.9  2  Fib_alpha        Fibrinogen alpha/beta chain family
       0.75    9.6  10.7        3.4    7.5   1.7    2.3  2  CdvA             CdvA-like coiled-coil domain
       0.81   10.4   7.0        2.8    8.6   1.4    2.5  2  DUF4665          Domain of unknown function (DUF4665)
        1.2    9.1  11.0       0.84    9.7   8.8    1.7  2  Laminin_II       Laminin Domain II
        1.5    8.8  14.1        3.3    7.7   1.1    2.9  3  Prefoldin_2      Prefoldin subunit
        1.5    7.9  12.0        3.8    6.6   4.3    2.2  2  RmuC             RmuC family
        1.6    8.7  15.2      0.081   12.9   2.2    2.6  2  DUF1043          Protein of unknown function (DUF1043)
        1.6    8.8   6.6       0.97    9.5   1.8    2.7  3  GvpK             Gas vesicle protein K
        1.9    6.3   6.8        2.9    5.7   6.8    1.3  1  Prominin         Prominin
          2    8.9   8.4        5.5    7.5   0.0    3.5  3  FlaC_arch        Flagella accessory protein C (FlaC)
        2.4    8.1  12.2         14    5.6   1.6    3.1  3  Prefoldin        Prefoldin subunit
        2.5    8.5  10.2        4.5    7.6   9.5    1.8  1  YlqD             YlqD protein
        2.8    8.0   7.9         33    4.6   7.7    2.5  1  PilJ             Type IV pili methyl-accepting chemotaxis tra
        2.9    7.4   9.5        4.8    6.7   0.8    2.3  2  Fzo_mitofusin    fzo-like conserved region
        3.1    8.1  10.9        1.6    9.0   3.1    2.8  3  DUF2951          Protein of unknown function (DUF2951)
        3.7    6.8  10.0        6.7    6.0  10.0    1.4  1  DUF4407          Domain of unknown function (DUF4407)
          4    7.8  15.4        8.3    6.8   0.9    3.2  3  DUF4164          Domain of unknown function (DUF4164)
        4.9    7.2   8.5         11    6.0   2.8    3.2  3  DUF4298          Domain of unknown function (DUF4298)
          5    7.0  11.7        1.2    9.0   1.4    2.3  2  ACCA             Acetyl co-enzyme A carboxylase carboxyltrans
          5    7.6  15.0        5.9    7.4   1.6    2.8  3  Snapin_Pallidin  Snapin/Pallidin
        5.5    6.8  12.8       0.11   12.3   2.4    2.1  2  DUF724           Protein of unknown function (DUF724)
        5.5    6.4  19.7         12    5.2  19.5    1.5  1  Golgin_A5        Golgin subfamily A member 5
        6.8    7.1  12.7        1.8    9.0   3.0    2.8  2  CLZ              C-terminal leucine zipper domain of cyclic n
          8    6.6  14.6      0.099   12.8   1.2    2.7  3  CHDCT2           CHDCT2 (NUC038) domain


Domain annotation for each model (and alignments):
>> Pex14_N  Peroxisomal membrane anchor protein (Pex14p) conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.0   0.2   3.9e-18   1.7e-15       2      54 ..       3      55 ..       2      67 .. 0.84
   2 !   26.3   0.1   2.3e-08   9.6e-06     123     157 .]      64      98 ..      51      98 .. 0.85

  Alignments for each domain:
  == domain 1  score: 58.0 bits;  conditional E-value: 3.9e-18
     Pex14_N  2 edlveqAvkFLqdpsVrsaplekkvaFLesKGLtqeEIeeaLkraereeease 54
                +dl+++Av+FL+ +s+ +ap++kk++FL sKGL+q+EI+ a++ a+++ ++s 
  EPX71120.1  3 QDLLKNAVEFLRQDSIMDAPVAKKIEFLSSKGLNQDEIQNAFALAQSPLYNSI 55
                79*****************************************9777666553 PP

  == domain 2  score: 26.3 bits;  conditional E-value: 2.3e-08
     Pex14_N 123 pPlrtwrdllitatalaglgaglyglskryiaPmi 157
                 +  r+wrd++i+ ++ +g++ ++y l+k+y++Pm+
  EPX71120.1  64 TLTRDWRDWFIMGVISGGFAWSVYTLVKKYLVPML 98 
                 4468******************************6 PP

>> Exonuc_VII_L  Exonuclease VII, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   3.2   5.6e-06    0.0024     157     251 ..     110     219 ..      37     245 .. 0.71

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 5.6e-06
  Exonuc_VII_L 157 ekaikrlleekkqrleklasrlkspeellerkrqrldeleerleralkkq...lkkkrerleelkerl.k...........ekleekkerlkklker 238
                   ++a++r++ee+++ l++l+++ ks ++++e++++ ld + ++le++l++     +++ +++ ++++ + +              ++++e+lkkl+e+
    EPX71120.1 110 KNALDRRFEEAEKTLHSLSETTKSLSQRTEKNQDDLDAALDDLEETLSTLrrdSDQRDREIARISHDVyTmsaktlpqsleMIQKSQEESLKKLAEE 206
                   6788899999999999999999999999999999988888888885554422244444444444444433444434433321122222333444444 PP

  Exonuc_VII_L 239 lelleekkerlee 251
                   +++l++ ++++++
    EPX71120.1 207 VKQLQSLQQNHST 219
                   4444444444444 PP

>> Emaravirus_P4  P4 movement protein of Emaravirus, and the 30K superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.4   1.5e-05    0.0065     199     287 ..      83     171 ..      75     227 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 1.5e-05
  Emaravirus_P4 199 qwdvftfekslpaevalmsgksnflkvksyldkkynerkeallqleeisnaliwgsdqglnkvkaklkedtssstlllidsekrveaik 287
                     w v+t+ k+    +      + +   k+ ld++++e  ++l+ l e +++l   +++  + + a l++  ++ + l +ds++r   i 
     EPX71120.1  83 AWSVYTLVKKYLVPMLEPPSPNAYEEDKNALDRRFEEAEKTLHSLSETTKSLSQRTEKNQDDLDAALDDLEETLSTLRRDSDQRDREIA 171
                    688888877655444444556889999*********************************************************98764 PP

>> LMBR1  LMBR1-like membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   5.5   2.2e-05    0.0094     194     327 ..     123     253 ..      56     268 .. 0.72

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 2.2e-05
       LMBR1 194 iksdldeelkklyfeaaklntekeeaereledllkevkklrksi.sesdp.lrkyleeilkkvPeeiaeklksnenkteeslaklekqlikalqkrert 290
                   ++l+e++k+l+ + +k +++++ a ++le++l+ +++ +++  +e ++  +++ ++  k+ P+ ++   ++++++++++la++     k+lq  +++
  EPX71120.1 123 TLHSLSETTKSLSQRTEKNQDDLDAALDDLEETLSTLRRDSDQRdREIARiSHDVYTMSAKTLPQSLEMI-QKSQEESLKKLAEEV----KQLQSLQQN 216
                 5678899999999999999999999999999999999886555404444544488888888888865544.334444555555555....445555555 PP

       LMBR1 291 ekqwkrllekalelediiknksskekefkssessrrg 327
                 + +  ++ + a ++ d i++k + +++ +++e +++ 
  EPX71120.1 217 HSTSTNNFDSANFTTDDIEQKPNPQNATNEEETTSLP 253
                 5555667777777778888888888888877664444 PP

>> DUF1759  Protein of unknown function (DUF1759)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.9   2.1e-05    0.0088      53     116 ..     103     166 ..      98     175 .. 0.91
   2 ?    2.6   0.7      0.28   1.2e+02      49      95 ..     178     224 ..     168     251 .. 0.60

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 2.1e-05
     DUF1759  53 eenYeaaveaLkkrYdnkrkiirellnelmklpslkeedasqlrrivdavneivralealgeea 116
                  ++Ye   +aL +r+++ +k +++l ++  +l + +e++++ l +  d ++e++ +l + +++ 
  EPX71120.1 103 PNAYEEDKNALDRRFEEAEKTLHSLSETTKSLSQRTEKNQDDLDAALDDLEETLSTLRRDSDQR 166
                 579***************************************************9998876655 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.28
     DUF1759  49 lalseenYeaaveaLkkrYdnkrkiirellnelmklpslkeedasql 95 
                 +++s++   + +e+++k  +++ k ++e +++l++l++ ++ ++++ 
  EPX71120.1 178 YTMSAKTLPQSLEMIQKSQEESLKKLAEEVKQLQSLQQNHSTSTNNF 224
                 56666666677777777777666666666777777766333333332 PP

>> ERM  Ezrin/radixin/moesin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3  17.1   6.5e-05     0.028      45     170 ..     106     238 ..     102     263 .. 0.69

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 6.5e-05
         ERM  45 aeeeaelLeqkaaeaeeeiqrlkes....aekeeeekeklerklreaeleaarleeeserkeeeaerLkeeleeareae........eeakeklleals 131
                  ee+++ L+++ +eae+    l e+    ++++e+++++l + l++ e+ +++l+++s+++++e  r  +++  + ++         ++ +e+      
  EPX71120.1 106 YEEDKNALDRRFEEAEKTLHSLSETtkslSQRTEKNQDDLDAALDDLEETLSTLRRDSDQRDREIARISHDVYTMSAKTlpqslemiQKSQEE------ 198
                 69999**********999999988722224689**************************************9998888733333333222222...... PP

         ERM 132 tpsks.....eseenveeseteeeeenseeesaeletdevekls 170
                     s     e+ ++ ++ ++++++++++  sa+++td++e+  
  EPX71120.1 199 ----SlkklaEEVKQLQSLQQNHSTSTNNFDSANFTTDDIEQKP 238
                 ....2333332233444555555555566677888888865532 PP

>> DUF3584  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2  13.2   5.6e-05     0.024     596     707 ..     105     221 ..      98     264 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 5.6e-05
     DUF3584 596 dyaaseeeLrerlqaleealqsaeak....qkqaeeelkqlnaeleeakravaeaatalknardtlerlqnekese.kdklekaiaerkqqaeeqlqkl 689
                 +y ++ ++L +r + +e++l s ++      +++e++ ++l a+l+++++ ++  ++   +++ ++ r+++   +  ++ l ++++  ++++ee+l+kl
  EPX71120.1 105 AYEEDKNALDRRFEEAEKTLHSLSETtkslSQRTEKNQDDLDAALDDLEETLSTLRRDSDQRDREIARISHDVYTMsAKTLPQSLEMIQKSQEESLKKL 203
                 56667779***********98766551111567889999999**************************9877666515678999999************ PP

     DUF3584 690 daqlkqleeqqkaaleel 707
                 +++ kql+  q++ +  +
  EPX71120.1 204 AEEVKQLQSLQQNHSTST 221
                 *******98777665544 PP

>> FAM76  FAM76 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   6.3   0.00021     0.089     194     286 ..     122     215 ..      94     264 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00021
       FAM76 194 eklaeekesnetskksldsnssdhlvavtqLkeeiaslkkqleqkdqellekdkkitelkaellekekelreklke.lekeakekieklekkir 286
                 ++l++ +e++++ ++ +++n+ d   a+ +L+e++ +l++  +q+d e+    + + ++ a++l +  e+ +k +e + k+  e++++l++  +
  EPX71120.1 122 KTLHSLSETTKSLSQRTEKNQDDLDAALDDLEETLSTLRRDSDQRDREIARISHDVYTMSAKTLPQSLEMIQKSQEeSLKKLAEEVKQLQSLQQ 215
                 3344444555555568888999999***********************************9999998887776654145777777777776444 PP

>> FUSC  Fusaric acid resistance protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   3.3   0.00035      0.15     214     327 ..     103     223 ..      95     260 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00035
        FUSC 214 irararalrrllsrmlallallsslarllarlraeeaaavpelaallaelaal..eaaaaaealeaalaalrarlralrrale.....adadtaallla 305
                   a  +  ++l +r+ ++  +l+sl +  + l+++ ++ +++l+a l++l++   + ++++++ + ++a++ +++   ++          +  +++ l 
  EPX71120.1 103 PNAYEEDKNALDRRFEEAEKTLHSLSETTKSLSQRTEKNQDDLDAALDDLEETlsTLRRDSDQRDREIARISHDVYTMSAKTLpqsleMIQKSQEESLK 201
                 555556667888888889999999999999999999999999999999999988856666677777777777776443333333455566666668888 PP

        FUSC 306 rlaellaelaqllaslraleaa 327
                  lae++++l+ l++ + ++++ 
  EPX71120.1 202 KLAEEVKQLQSLQQNHSTSTNN 223
                 8888888888888877776655 PP

>> Enkurin  Calmodulin-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   2.0   0.00067      0.29      48      96 ..     111     161 ..     104     163 .. 0.86
   2 ?    4.4   3.1      0.12        51      33      73 ..     196     236 ..     160     247 .. 0.62

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00067
     Enkurin  48 egLkkkweelnkeyqslpllidtlskrqrKek..lEkeLkqlEkdikllek 96 
                 + L ++ ee +k ++sl+ ++ +ls+r++K++  l++ L+ lE+ + +l +
  EPX71120.1 111 NALDRRFEEAEKTLHSLSETTKSLSQRTEKNQddLDAALDDLEETLSTLRR 161
                 57999*************99999999888864449*********9999887 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.12
     Enkurin  33 pgmrllseeerqellegLkkkweelnkeyqslpllidtlsk 73 
                 ++ +l + +e  + l++L+++++  ++++ s  +++d +++
  EPX71120.1 196 QEESLKKLAEEVKQLQSLQQNHSTSTNNFDSANFTTDDIEQ 236
                 34444455566666777777777777777777777776665 PP

>> ECH_2  Enoyl-CoA hydratase/isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   5.7   0.00057      0.24     192     295 ..     117     214 ..     101     254 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00057
                 ....--------......----SHHHHHHHHHHHT.-S-TTTHHHHHH.T..--SHHHHHHHHHHHHS-HHHHHHHHHHHHHHTTT--HHHHHHHHHHH CS
       ECH_2 192 eeaveevleelaeeaeeeeeeselaekreaidrlfsadsveeiveaLekaeaeedewakktletlkkrsPtslkvtleqlrrgrklsslaevlrmElrl 290
                  e+ e++l++l+e++++   +++++++++ +d++   d++ee ++ L+++++++d+ ++++ + + ++s  +l  +le+++++++ s l+  l++E++ 
  EPX71120.1 117 FEEAEKTLHSLSETTKSL--SQRTEKNQDDLDAAL--DDLEETLSTLRRDSDQRDREIARISHDVYTMSAKTLPQSLEMIQKSQEES-LK-KLAEEVKQ 209
                 455666677766555442..578888999****99..99*********98889999999**********************999986.43.34455544 PP

                 HHHHH CS
       ECH_2 291 alrll 295
                  ++l 
  EPX71120.1 210 LQSLQ 214
                 44443 PP

>> Vps53_N  Vps53-like, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   9.1   0.00083      0.35      30     132 ..     113     218 ..     101     222 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00083
     Vps53_N  30 lqeeikklddeiksvvraqanvgekgkealeeaqkaieelfqkikeikdkaekseemvkeitrdIkqLDiAKknlttsiTtlkr.....LkmLvtaves 123
                 l    ++ ++ ++s+ ++  + +++++++ +++++a+ +l++ +++++  +++ +  +  i++d+  +    k l +s+ ++++     Lk L++ v++
  EPX71120.1 113 LDRRFEEAEKTLHSLSETTKSLSQRTEKNQDDLDAALDDLEETLSTLRRDSDQRDREIARISHDVYTM--SAKTLPQSLEMIQKsqeesLKKLAEEVKQ 209
                 5556677888999999*************************************************886..5579*******98655555999******* PP

     Vps53_N 124 leallskrs 132
                 l+ l +++s
  EPX71120.1 210 LQSLQQNHS 218
                 *99999875 PP

>> DUF3573  Protein of unknown function (DUF3573)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   3.7    0.0011      0.46      28     100 ..     186     253 ..     166     268 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.0011
     DUF3573  28 aesneqtsksnlidkelilklqkqikelqaeinhlketknsnesaqfttysskvedsklprslldnkeskdls 100
                  +s e ++     ++e + kl +++k+lq+  ++     n+ +sa+ftt   ++e++ +p+  ++++e+  l 
  EPX71120.1 186 PQSLEMIQ---KSQEESLKKLAEEVKQLQSLQQNHSTSTNNFDSANFTTD--DIEQKPNPQNATNEEETTSLP 253
                 33344444...556789999*********96666666666699*****95..788999999999998988775 PP

>> Med9  RNA polymerase II transcription mediator complex subunit 9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.2     0.068        29       3      40 ..     124     161 ..      99     176 .. 0.72
   2 ?    8.6   2.7    0.0047         2      37      71 ..     181     215 ..     180     222 .. 0.91

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.068
        Med9   3 lPliydilksiekdpnlsskdletktgelrhkLkkare 40 
                 l ++ ++ ks+++ +++++ dl++++++l   L++ r 
  EPX71120.1 124 LHSLSETTKSLSQRTEKNQDDLDAALDDLEETLSTLRR 161
                 44555556666555567777777777777777777765 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0047
        Med9  37 karelirelpgidrsveeqeaeieeleeqlakKre 71 
                 +a++l ++l+ i++s+ee +++++e  +ql+  ++
  EPX71120.1 181 SAKTLPQSLEMIQKSQEESLKKLAEEVKQLQSLQQ 215
                 58999999***********************9998 PP

>> HAUS-augmin3  HAUS augmin-like complex subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   4.0    0.0074       3.2      73     148 ..     103     178 ..      96     185 .. 0.75
   2 ?    8.7   7.3    0.0028       1.2      66     140 ..     186     263 ..     179     267 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0074
  HAUS-augmin3  73 leeeeesleaLeqelqeLqkekalklkrlnkLqvqaaslqqelrkleeeekeakkklkeaqeelraenaetnavLq 148
                   +++ ee+++aL + ++e++k+ +++ +  + L   + ++q+ l +  +  +e+   l++  ++  +e+a++++   
    EPX71120.1 103 PNAYEEDKNALDRRFEEAEKTLHSLSETTKSLSQRTEKNQDDLDAALDDLEETLSTLRRDSDQRDREIARISHDVY 178
                   5566777888888888888888888888888888888888888888888888888888888888888888776555 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0028
  HAUS-augmin3  66 vellevileeeeesleaLeqelqeLqkeka...lklkrlnkLqvqaaslqqelrkleeeekeakkklkeaqeelraen 140
                   +++le+i + +eesl++L++e+++Lq+ ++     +++++  + ++ +++q+ +  +++++e +  l e q+++ a+ 
    EPX71120.1 186 PQSLEMIQKSQEESLKKLAEEVKQLQSLQQnhsTSTNNFDSANFTTDDIEQKPNPQNATNEEETTSLPEWQVSMHAQA 263
                   7999****************988777665511157889999999999********************99999988875 PP

>> DUF948  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   6.8     0.029        12      19      58 ..     122     161 ..     110     239 .. 0.71

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.029
      DUF948  19 vvllklkktldeaaatieelekqvdpilkevedllakvne 58 
                 ++l +l++t ++++++ e+ ++++d+ l+++e++l++ ++
  EPX71120.1 122 KTLHSLSETTKSLSQRTEKNQDDLDAALDDLEETLSTLRR 161
                 3444455555555555555555555555555555555544 PP

>> Ribosomal_L29  Ribosomal L29 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.5     0.023       9.9       5      26 ..     139     160 ..     135     165 .. 0.93
   2 ?   10.7   2.1   0.00095       0.4       3      32 ..     191     220 ..     190     227 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.023
                    HS-HHHHHHHHHHHHHHHHHHH CS
  Ribosomal_L29   5 elsdeeLkeklkelkkeLfnLr 26 
                    e++ ++L + l++l++ L +Lr
     EPX71120.1 139 EKNQDDLDAALDDLEETLSTLR 160
                    7999*****************9 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00095
                    HHHS-HHHHHHHHHHHHHHHHHHHHHHHHT CS
  Ribosomal_L29   3 lrelsdeeLkeklkelkkeLfnLrfqkatg 32 
                    + ++s ee  +kl+e+ k+L  L  +++t+
     EPX71120.1 191 MIQKSQEESLKKLAEEVKQLQSLQQNHSTS 220
                    668*************************98 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   6.9    0.0029       1.2      35     123 ..     123     213 ..     110     214 .. 0.81
   2 ?    2.0   0.9      0.48   2.1e+02      66     100 ..     187     221 ..     182     237 .. 0.43

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.0029
     DUF1664  35 TkrslsdavesvskqleqvseslaatkrhLssridrvdkkldeqkeiskeikeevtevredl..seigedvesvkeaveglesklerieek 123
                 T +sls+  +s+s++ e+ +++l a+ ++L++ + ++ +  d+  + ++ i+++v +++ ++  ++++   +s +e  ++l+++++++++ 
  EPX71120.1 123 TLHSLSETTKSLSQRTEKNQDDLDAALDDLEETLSTLRRDSDQRDREIARISHDVYTMSAKTlpQSLEMIQKSQEESLKKLAEEVKQLQSL 213
                 6688999999999999999999999999999999999999999999999999999988887644566666677777888888888887765 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.48
     DUF1664  66 sridrvdkkldeqkeiskeikeevtevredlseig 100
                 + ++ ++k+++e+ +  +e  +++++++++ s+  
  EPX71120.1 187 QSLEMIQKSQEESLKKLAEEVKQLQSLQQNHSTST 221
                 33444444444433333333333333333333333 PP

>> Fib_alpha  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   9.5   0.00027      0.11      30     129 ..     110     211 ..     104     215 .. 0.91
   2 ?    2.6   4.7      0.33   1.4e+02      30      81 ..     200     246 ..     189     262 .. 0.42

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00027
                 CCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCH.HHH.HHHHHHHHHHHHHHHHHHHHHH CS
   Fib_alpha  30 ekdvkkdlekleneleeisnstkeaeelvkeikdslrekqkskkdndnvikksskeleeeilrlketidaqe.sni.rvLqnvlesneqkiqkLeqdid 126
                 ++ ++++ e+ e++l+++s++tk+ ++ +++ +d l ++    +++ +++++ s++ ++ei+r+ + + +   +++ + L  + +s+e++++kL ++++
  EPX71120.1 110 KNALDRRFEEAEKTLHSLSETTKSLSQRTEKNQDDLDAALDDLEETLSTLRRDSDQRDREIARISHDVYTMSaKTLpQSLEMIQKSQEESLKKLAEEVK 208
                 677899999***********************************99999999999*************99887555389******************** PP

                 HHH CS
   Fib_alpha 127 qke 129
                 q++
  EPX71120.1 209 QLQ 211
                 998 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.33
                 CCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Fib_alpha  30 ekdvkkdlekleneleeisnstkeaeelvkeikdslrekqkskkdndnvikk 81 
                  k++ +++++l++  +++s st++ ++   +++d+ ++ +      +n++++
  EPX71120.1 200 LKKLAEEVKQLQSLQQNHSTSTNNFDSANFTTDDIEQKPNP-----QNATNE 246
                 22333333333333333333333333333333333333333.....333333 PP

>> CdvA  CdvA-like coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   1.7     0.008       3.4       3      54 ..     121     172 ..     119     182 .. 0.84
   2 ?    6.4   1.7     0.018       7.5      18      43 ..     187     212 ..     180     223 .. 0.86

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.008
        CdvA   3 kkALeeLvsegdipkstyeeikekleealkklkekakelkeklkkrlkeled 54 
                 +k+L+ L+++ +  ++++e+ +  l+ al++l+e+ ++l+   ++r +e+  
  EPX71120.1 121 EKTLHSLSETTKSLSQRTEKNQDDLDAALDDLEETLSTLRRDSDQRDREIAR 172
                 5788999999999999999999999999999999999999999999888765 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.018
        CdvA  18 styeeikekleealkklkekakelke 43 
                 +  e+i++  ee+lkkl e+ k+l++
  EPX71120.1 187 QSLEMIQKSQEESLKKLAEEVKQLQS 212
                 6789******************9976 PP

>> DUF4665  Domain of unknown function (DUF4665)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.4      0.14        61      48      90 ..     111     153 ..     104     161 .. 0.60
   2 ?    8.6   1.4    0.0066       2.8      48      94 ..     183     229 ..     168     236 .. 0.90

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.14
     DUF4665  48 enldkalvdiqkdlkslskklkletkkkekvkkkkekekvnvd 90 
                 + ld+ +++ +k l+sls+ +k+ +++ ek +++ +    +++
  EPX71120.1 111 NALDRRFEEAEKTLHSLSETTKSLSQRTEKNQDDLDAALDDLE 153
                 6789999999999999998665555544443344333333344 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0066
     DUF4665  48 enldkalvdiqkdlkslskklkletkkkekvkkkkekekvnvdeaae 94 
                 ++l ++l+ iqk+ +++ kkl+ e k+ + +++++ +++ n d+a+ 
  EPX71120.1 183 KTLPQSLEMIQKSQEESLKKLAEEVKQLQSLQQNHSTSTNNFDSANF 229
                 578899***********************************999875 PP

>> Laminin_II  Laminin Domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   8.8     0.002      0.84       6      95 ..     118     210 ..     114     216 .. 0.80
   2 ?    1.6   1.7      0.61   2.6e+02       7      48 ..     198     239 ..     193     251 .. 0.63

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.002
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXX.XXXXXXXX--TTTTTGGGHHHHHHHHHH....HHHHHHHH CS
  Laminin_II   6 aeanetakevleqlaplsqnlentkeklseinrsveetnekvk.dankaird.ArrsvkkLeklapqLldklkelkqleeasss.lsdnisei 95 
                 +ea++t+ +  e ++ lsq++e+ +++l  + +++eet   ++ d+ +  r+ Ar s    ++ a  L + l+ +++ +e+s   l ++++++
  EPX71120.1 118 EEAEKTLHSLSETTKSLSQRTEKNQDDLDAALDDLEETLSTLRrDSDQRDREiARISHDVYTMSAKTLPQSLEMIQKSQEESLKkLAEEVKQL 210
                 79**************************************999655555555155566666999***********998888333455555555 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.61
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Laminin_II   7 eanetakevleqlaplsqnlentkeklseinrsveetnekvk 48 
                 e +++++e  +ql+ l+qn +   ++  ++n + + +++k +
  EPX71120.1 198 ESLKKLAEEVKQLQSLQQNHSTSTNNFDSANFTTDDIEQKPN 239
                 344445555566777777777777777777776666666554 PP

>> Prefoldin_2  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   1.1    0.0078       3.3      61     103 ..     107     149 ..      85     152 .. 0.84
   2 ?    5.8   3.3      0.03        13      64     103 ..     110     149 ..     104     184 .. 0.71
   3 ?    4.9   5.2     0.059        25      47      95 ..     177     224 ..     154     228 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0078
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT CS
  Prefoldin_2  61 eevkeeLeerketlekeiktlekqleklekeleelkeelqkkl 103
                  ee k+ L+ r e++ek + +l++  ++l ++ e+ ++ l ++l
   EPX71120.1 107 EEDKNALDRRFEEAEKTLHSLSETTKSLSQRTEKNQDDLDAAL 149
                  5667889999999999999999999999999999999887765 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.03
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT CS
  Prefoldin_2  64 keeLeerketlekeiktlekqleklekeleelkeelqkkl 103
                  k+ L+ r e++ek + +l++  ++l ++ e+ ++ l ++l
   EPX71120.1 110 KNALDRRFEEAEKTLHSLSETTKSLSQRTEKNQDDLDAAL 149
                  5566666666666666666666666666666666665544 PP

  == domain 3  score: 4.9 bits;  conditional E-value: 0.059
                  EEEEETTEEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Prefoldin_2  47 vyklvGdvlvkqdkeevkeeLeerketlekeiktlekqleklekeleel 95 
                  vy +  ++l  q++e +++  ee++++l +e+k+l++ ++++ +  +++
   EPX71120.1 177 VYTMSAKTL-PQSLEMIQKSQEESLKKLAEEVKQLQSLQQNHSTSTNNF 224
                  555555554.789999999999999999999999999999998888776 PP

>> RmuC  RmuC family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   1.2     0.014       6.1     226     272 ..     115     161 ..     107     184 .. 0.61
   2 ?    6.6   4.3    0.0088       3.8      16      57 ..     184     225 ..     169     228 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.014
        RmuC 226 knaeeiaellgelydkfekfgedleklgkklekaqksydkavkkleg 272
                 ++ ee  ++l +l +  +++ ++ ek ++ l+ a ++++++ ++l +
  EPX71120.1 115 RRFEEAEKTLHSLSETTKSLSQRTEKNQDDLDAALDDLEETLSTLRR 161
                 55556666666666666666666666666666666666666665553 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0088
        RmuC  16 kfeekveeeskeeaeeleslkeqlkelqelneqlgdeaenLt 57 
                 ++ +++e  +k+++e+l++l e++k+lq+l+++ +++++n  
  EPX71120.1 184 TLPQSLEMIQKSQEESLKKLAEEVKQLQSLQQNHSTSTNNFD 225
                 4556677778999***********************999976 PP

>> DUF1043  Protein of unknown function (DUF1043)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   2.2   0.00019     0.081      38      95 ..     104     161 ..      73     186 .. 0.79
   2 ?    0.8   5.5       1.1   4.6e+02      54     101 ..     196     247 ..     181     264 .. 0.54

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.00019
     DUF1043  38 aeleeqkqeledHfaqsaelLetlaedyqkLyqhlaksseeLlpeleeqelfqqkkle 95 
                 ++ ee k+ l++ f+++ + L +l+e+++ L q  +k+++ L  +l+  e  ++   +
  EPX71120.1 104 NAYEEDKNALDRRFEEAEKTLHSLSETTKSLSQRTEKNQDDLDAALDDLEETLSTLRR 161
                 567999************************************7766655555433332 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 1.1
     DUF1043  54 saelLetlaedyqkLy...qhlaksseeLlp.eleeqelfqqkkleekkaea 101
                   e L++lae+ ++L+   q+ ++s++++ + + + +++ q+ + +++++e+
  EPX71120.1 196 QEESLKKLAEEVKQLQslqQNHSTSTNNFDSaNFTTDDIEQKPNPQNATNEE 247
                 4566777777666654110444444444433333444444433333333333 PP

>> GvpK  Gas vesicle protein K
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       8.2   3.5e+03      21      37 ..      10      28 ..       4      51 .. 0.63
   2 ?    9.5   1.8    0.0023      0.97      43      84 ..     114     155 ..     104     156 .. 0.89
   3 ?    0.4   0.1       1.6     7e+02      51      65 ..     198     212 ..     187     234 .. 0.65

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 8.2
        GvpK 21 veLlrq..llErqaiRRme 37
                ve+lrq  ++++ + +++e
  EPX71120.1 10 VEFLRQdsIMDAPVAKKIE 28
                7888876677776666666 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.0023
        GvpK  43 deeierlgetLmkleeeleelkesfgleeedLnldLgplgtl 84 
                 d   e++ +tL  l e  + l ++ + +++dL   L++l + 
  EPX71120.1 114 DRRFEEAEKTLHSLSETTKSLSQRTEKNQDDLDAALDDLEET 155
                 67789999******************************9865 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 1.6
        GvpK  51 etLmkleeeleelke 65 
                 e+L+kl+ee+++l++
  EPX71120.1 198 ESLKKLAEEVKQLQS 212
                 455566665555544 PP

>> Prominin  Prominin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   6.8    0.0068       2.9     245     360 ..     114     224 ..     105     266 .. 0.69

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0068
    Prominin 245 lenlkeakeqLeqvnklekeLrksgsqLrdglrgvkrdlnqalsnlCqseeCskilssleiekldtskcldqlpnvdevlealeevletnlssivkegl 343
                  +  +ea++ L+++++++k+L + +++ +d l ++ +dl+++ls l +  + ++  ++ ei ++  +    + + + + le +++  e++l++++ e++
  EPX71120.1 114 DRRFEEAEKTLHSLSETTKSLSQRTEKNQDDLDAALDDLEETLSTLRR--DSDQ--RDREIARISHDVYTMSAKTLPQSLEMIQKSQEESLKKLA-EEV 207
                 456677888888888888888888888888888888888888888544..3333..333333344444445556666777777888777777777.667 PP

    Prominin 344 arlneipekvknqtaev 360
                 ++l+++++   + t+++
  EPX71120.1 208 KQLQSLQQNHSTSTNNF 224
                 77777777776666654 PP

>> FlaC_arch  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.3      0.75   3.2e+02      10      35 ..     111     136 ..     104     140 .. 0.63
   2 ?    7.5   0.0     0.013       5.5       3      37 ..     143     177 ..     142     185 .. 0.90
   3 ?    2.1   1.3       0.6   2.6e+02      15      40 ..     188     210 ..     180     224 .. 0.63

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.75
   FlaC_arch  10 sklsteletvkkeneelsksveelke 35 
                 + l+ ++e ++k++ +ls++ + l +
  EPX71120.1 111 NALDRRFEEAEKTLHSLSETTKSLSQ 136
                 56666666677777777776666665 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.013
   FlaC_arch   3 delEnklsklsteletvkkeneelsksveelkenV 37 
                 d+l+  l++l+ +l+t++++ ++   ++ ++  +V
  EPX71120.1 143 DDLDAALDDLEETLSTLRRDSDQRDREIARISHDV 177
                 789999*********************99999988 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.6
   FlaC_arch  15 eletvkkeneelsksveelkenVkdl 40 
                 +le+++k++ee   s+++l e+Vk+l
  EPX71120.1 188 SLEMIQKSQEE---SLKKLAEEVKQL 210
                 55555555554...455555555555 PP

>> Prefoldin  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.9      0.11        48      79     107 ..     110     138 ..     105     143 .. 0.78
   2 ?    4.9   0.4     0.053        23      83     116 ..     139     172 ..     135     176 .. 0.60
   3 ?    5.6   1.6     0.033        14      80     116 ..     183     219 ..     178     227 .. 0.70

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.11
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Prefoldin  79 iellkkkleelekqlekleeeleklkdqi 107
                 +  l+++ ee+ek+l++l e  + l+++ 
  EPX71120.1 110 KNALDRRFEEAEKTLHSLSETTKSLSQRT 138
                 56789999999999999999988888765 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.053
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Prefoldin  83 kkkleelekqlekleeeleklkdqittleanlaq 116
                 +k+ ++l+++l++lee l  l++  ++  +++a+
  EPX71120.1 139 EKNQDDLDAALDDLEETLSTLRRDSDQRDREIAR 172
                 4555666666666666666666666665555555 PP

  == domain 3  score: 5.6 bits;  conditional E-value: 0.033
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Prefoldin  80 ellkkkleelekqlekleeeleklkdqittleanlaq 116
                 ++l + le ++k++e+  ++l++  +q+++l++n ++
  EPX71120.1 183 KTLPQSLEMIQKSQEESLKKLAEEVKQLQSLQQNHST 219
                 5566677777777777777777777777777777655 PP

>> YlqD  YlqD protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   9.5     0.011       4.5      19      98 ..     139     222 ..     103     230 .. 0.90

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.011
        YlqD  19 eelqqqlqaqieqldkelqqLefqakrlikeikkqsaq....qieeiqeqvekekserlekkkqllqqleqvqkLelgsevkqg 98 
                 e+ q++l+a+++ l++ l+ L+ +  +  +ei++ s +    +++++ +++e  ++ ++e  k+l ++++q+q+L+ +   + +
  EPX71120.1 139 EKNQDDLDAALDDLEETLSTLRRDSDQRDREIARISHDvytmSAKTLPQSLEMIQKSQEESLKKLAEEVKQLQSLQQNHSTSTN 222
                 56688999999999999999999999999999998888999999*******************************998766655 PP

>> PilJ  Type IV pili methyl-accepting chemotaxis transducer N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   7.7     0.077        33      41     103 ..     107     167 ..      87     233 .. 0.76

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.077
        PilJ  41 aearaqlretiaqfdrtlaalrlgdpapgllvpae..avraqleaveqlWqelkkpaeaalaqqd 103
                 +e++++l+++ ++ ++tl++l+++ ++ ++ + ++  +  a+l+++e+  + l++       q+d
  EPX71120.1 107 EEDKNALDRRFEEAEKTLHSLSETTKSLSQRTEKNqdDLDAALDDLEETLSTLRRDS----DQRD 167
                 567777888888888888888888777777776666666666666666555555555....3333 PP

>> Fzo_mitofusin  fzo-like conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.8     0.011       4.8      97     133 ..     125     161 ..     118     177 .. 0.87
   2 ?    4.8   2.3     0.042        18     103     140 ..     182     219 ..     169     235 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.011
  Fzo_mitofusin  97 qelsstfarlcqqvdetekeleeeikelekeieklee 133
                    + ls+t + l+q+ ++++++l++ +++le+++++l +
     EPX71120.1 125 HSLSETTKSLSQRTEKNQDDLDAALDDLEETLSTLRR 161
                    57999*************************9999865 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.042
  Fzo_mitofusin 103 farlcqqvdetekeleeeikelekeiekleevqkkakl 140
                     + l q+ ++ +k+ ee++k+l +e+++l+++q++  +
     EPX71120.1 182 AKTLPQSLEMIQKSQEESLKKLAEEVKQLQSLQQNHST 219
                    4678899999999999**************99987655 PP

>> DUF2951  Protein of unknown function (DUF2951)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       8.1   3.5e+03      69      93 ..      66      91 ..      55      94 .. 0.67
   2 ?    9.0   3.1    0.0038       1.6      14      71 ..     115     172 ..     105     183 .. 0.77
   3 ?    3.7   1.3      0.16        70      10      54 ..     167     213 ..     158     237 .. 0.62

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 8.1
     DUF2951 69 irdikmw.vlglvgtilsslviallk 93
                 rd + w ++g++   ++  v +l+k
  EPX71120.1 66 TRDWRDWfIMGVISGGFAWSVYTLVK 91
                58888775778888777777766665 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0038
     DUF2951  14 rrleendktmlekldeikdslktqekvyikldktleelrkekeideknkkkndknird 71 
                 rr+ee +kt+ +  +  k   +  ek ++ ld +l++l+       ++ ++ d++i  
  EPX71120.1 115 RRFEEAEKTLHSLSETTKSLSQRTEKNQDDLDAALDDLEETLSTLRRDSDQRDREIAR 172
                 89*******9998888876666668999999999999988777777777777766655 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.16
     DUF2951  10 ewrlrrleendktmlekl..deikdslktqekvyikldktleelrke 54 
                 +  + r+  +  tm  k   + ++  +k+qe+  +kl  ++++l+  
  EPX71120.1 167 DREIARISHDVYTMSAKTlpQSLEMIQKSQEESLKKLAEEVKQLQSL 213
                 55566777777777654323567777888888888887655555433 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0  10.0     0.016       6.7     130     241 ..     120     232 ..     101     254 .. 0.46

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.016
     DUF4407 130 a......ltaelaeleaqiaalqaeidaaearldalraeaqkeldgtkgtgttgvaGkgpaakekkaqldaaqaelaelkakld............... 207
                 a      l+++++ l                                        ++ +++ +  +a+ld+++++l +l++++d               
  EPX71120.1 120 AektlhsLSETTKSL---------------------------------------SQRTEKNQDDLDAALDDLEETLSTLRRDSDqrdreiarishdvyt 179
                 111112222222222.......................................222223333333333333333333333333333333333333333 PP

     DUF4407 208 ...................atarlaalraelaeleaerakeraasqaaaaadd 241
                                    + ++la+  ++l++l+++ +++++++++a+   d
  EPX71120.1 180 msaktlpqslemiqksqeeSLKKLAEEVKQLQSLQQNHSTSTNNFDSANFTTD 232
                 33333344444444443337777777777777777777777777777665555 PP

>> DUF4164  Domain of unknown function (DUF4164)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.9     0.019       8.3      45      75 ..     107     137 ..     104     141 .. 0.92
   2 ?    3.4   9.2      0.22        94       4      47 ..     136     176 ..     133     216 .. 0.61
   3 ?    1.2   0.2       1.1   4.6e+02       4      35 ..     194     225 ..     191     236 .. 0.64

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.019
     DUF4164  45 gedrsRLaeeLdqaearaarleevnrEvsrr 75 
                 +ed++ L+ ++ +ae  + +l+e+++ +s+r
  EPX71120.1 107 EEDKNALDRRFEEAEKTLHSLSETTKSLSQR 137
                 79************************99998 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.22
     DUF4164   4 keleaaltrLeaaldsLEkavdr.rleaerkrdeleaeiealged 47 
                 ++ e+ +++L+aald LE+ +   r+++    d++++ei+++  d
  EPX71120.1 136 QRTEKNQDDLDAALDDLEETLSTlRRDS----DQRDREIARISHD 176
                 67788999*********99886514444....4444555555444 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 1.1
     DUF4164   4 keleaaltrLeaaldsLEkavdrrleaerkrd 35 
                 k+ e+ l++L + +++L +  +++ ++ ++ d
  EPX71120.1 194 KSQEESLKKLAEEVKQLQSLQQNHSTSTNNFD 225
                 45566666666666666666666666655555 PP

>> DUF4298  Domain of unknown function (DUF4298)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.3      0.53   2.2e+02       8      31 ..     117     140 ..     110     154 .. 0.56
   2 ?    1.5   0.1      0.67   2.9e+02       4      30 ..     138     164 ..     135     168 .. 0.82
   3 ?    6.0   2.8     0.027        11       3      44 ..     188     229 ..     187     254 .. 0.78

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.53
                 HHHHHHHHHHHHHHHHHHHHTHHH CS
     DUF4298   8 ldeisallqqLeealeqwkklqkk 31 
                 ++e++++l +L+e+ +++ +  +k
  EPX71120.1 117 FEEAEKTLHSLSETTKSLSQRTEK 140
                 555555555555555555444333 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.67
                 HHHHHHHHHHHHHHHHHHHHHHHHTHH CS
     DUF4298   4 mekildeisallqqLeealeqwkklqk 30 
                  ek  d++ a+l++Lee+l ++++ ++
  EPX71120.1 138 TEKNQDDLDAALDDLEETLSTLRRDSD 164
                 688899999999999999999887765 PP

  == domain 3  score: 6.0 bits;  conditional E-value: 0.027
                 HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSHHH CS
     DUF4298   3 emekildeisallqqLeealeqwkklqkklakLdeYYqseqw 44 
                 ++e i +++++ l++L e ++q++ lq+++++  + ++s ++
  EPX71120.1 188 SLEMIQKSQEESLKKLAEEVKQLQSLQQNHSTSTNNFDSANF 229
                 67888999999*****************99876666666655 PP

>> ACCA  Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   1.4    0.0027       1.2       3      49 ..     119     165 ..     117     182 .. 0.88
   2 ?    2.9   3.2      0.21        90       4      57 ..     196     258 ..     181     267 .. 0.67

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.0027
        ACCA   3 dfekpiaeleekieelkklaeesevdlseeieklekkleklkkeiyk 49 
                 + ek +++l+e+ ++l++ +e+++ dl++++++le++l++l+++  +
  EPX71120.1 119 EAEKTLHSLSETTKSLSQRTEKNQDDLDAALDDLEETLSTLRRDSDQ 165
                 789*************************************9997654 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.21
        ACCA   4 fekpiaeleekieelkklaeesevd.........lseeieklekkleklkkeiyknltpwqkv 57 
                  e+++++l e++++l++l+++++++         ++++ie+  +  +++++e +++l +wq  
  EPX71120.1 196 QEESLKKLAEEVKQLQSLQQNHSTStnnfdsanfTTDDIEQKPNPQNATNEEETTSLPEWQVS 258
                 577888888888888888777444333455544556666666666666666666667777655 PP

>> Snapin_Pallidin  Snapin/Pallidin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.1      0.53   2.3e+02      64      88 ..     116     140 ..     110     140 .. 0.83
   2 ?    7.4   1.6     0.014       5.9      17      51 ..     129     164 ..     117     181 .. 0.80
   3 ?    5.1   5.4     0.072        31      16      51 ..     183     218 ..     171     228 .. 0.83

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.53
  Snapin_Pallidin  64 KLvnikkrmsslnerlqklkkRaek 88 
                      +  +++k ++sl+e++++l +R ek
       EPX71120.1 116 RFEEAEKTLHSLSETTKSLSQRTEK 140
                      5567889999999999999999875 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.014
  Snapin_Pallidin  17 eldekl.kelrqsQeeLleqldrlnekLkeleeaqe 51 
                      e++++l + ++++Q++L + ld l e L  l+++ +
       EPX71120.1 129 ETTKSLsQRTEKNQDDLDAALDDLEETLSTLRRDSD 164
                      4444442568999***************99998877 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.072
  Snapin_Pallidin  16 deldeklkelrqsQeeLleqldrlnekLkeleeaqe 51 
                      ++l ++l+ +++sQee l++l ++ ++L++l+++++
       EPX71120.1 183 KTLPQSLEMIQKSQEESLKKLAEEVKQLQSLQQNHS 218
                      667789999*******99999999999999999887 PP

>> DUF724  Protein of unknown function (DUF724)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   2.4   0.00026      0.11     106     172 ..     116     182 ..     108     191 .. 0.88
   2 ?   -0.8   3.9       2.7   1.2e+03     101     134 ..     193     226 ..     180     267 .. 0.49

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00026
      DUF724 106 klleerkklekkieeeesekrkleeeidelekkilelerqlallkekkeaadkeiarlkseaeklee 172
                 + +e++k l++  e+ +s +++ e++ d+l+ +  +le+ l +l+++ ++ d+eiar+++++ +++ 
  EPX71120.1 116 RFEEAEKTLHSLSETTKSLSQRTEKNQDDLDAALDDLEETLSTLRRDSDQRDREIARISHDVYTMSA 182
                 56788888888899999999999***********************************999877765 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 2.7
      DUF724 101 kdeqtklleerkklekkieeeesekrkleeeide 134
                 +++q++ l+++ +  k+++  +++++   +++d 
  EPX71120.1 193 QKSQEESLKKLAEEVKQLQSLQQNHSTSTNNFDS 226
                 2223222222222222222222222222333333 PP

>> Golgin_A5  Golgin subfamily A member 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2  19.5     0.028        12      84     191 ..     106     219 ..     102     251 .. 0.75

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.028
   Golgin_A5  84 qqaeaeslreqlqeleeqleeerkakeeveaelerlkeelryleeelvrskatlqsrikdrekeieklrnqlttkslsss......seselesRlkqLt 176
                 ++++ + l  + +e+e++l++ +++ +++++  e+ +++l+++ ++l ++ +tl+    +r++ei ++ +++ t s ++        ++  e+ lk+L 
  EPX71120.1 106 YEEDKNALDRRFEEAEKTLHSLSETTKSLSQRTEKNQDDLDAALDDLEETLSTLRRDSDQRDREIARISHDVYTMSAKTLpqslemIQKSQEESLKKLA 204
                 566777888889999999999999999999999999999999999999999999999999999999999988765544332224445677788899999 PP

   Golgin_A5 177 esLiqKQtvlEalst 191
                 e + q Q +  + st
  EPX71120.1 205 EEVKQLQSLQQNHST 219
                 988777765444444 PP

>> CLZ  C-terminal leucine zipper domain of cyclic nucleotide-gated channels
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   3.0    0.0042       1.8      21      70 ..     105     154 ..      97     155 .. 0.91
   2 ?    2.8   1.9      0.36   1.5e+02      24      45 ..     191     212 ..     181     223 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.0042
         CLZ  21 kagaeqkeleekverLessLeaLqtrlarLlaeyessqrkLkqRitkLEk 70 
                 + +++++ l+++ e+ e++L +L    + L +  e+ q  L + + +LE+
  EPX71120.1 105 AYEEDKNALDRRFEEAEKTLHSLSETTKSLSQRTEKNQDDLDAALDDLEE 154
                 45689999****************************************97 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.36
         CLZ  24 aeqkeleekverLessLeaLqt 45 
                   qk+ ee +++L +++++Lq 
  EPX71120.1 191 MIQKSQEESLKKLAEEVKQLQS 212
                 5588999999999999998884 PP

>> CHDCT2  CHDCT2 (NUC038) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1       7.9   3.4e+03      12      23 ..      72      83 ..      62      86 .. 0.83
   2 ?   12.8   1.2   0.00023     0.099      87     153 ..     107     173 ..      99     178 .. 0.87
   3 ?    1.8   2.1      0.57   2.4e+02      63     123 ..     183     243 ..     178     265 .. 0.62

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 7.9
      CHDCT2 12 WllagvvlhGya 23
                W+++gv+  G+a
  EPX71120.1 72 WFIMGVISGGFA 83
                ********9997 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 0.00023
      CHDCT2  87 kekvgslaqrfaelellaeshqkllkesaagnknanavlekvLnqleelLsdmkadvsrlpatlsrl 153
                 +e+ ++l++rf e+e + +s ++++k+ ++  ++ ++ l   L+ lee Ls ++ d  +    ++r+
  EPX71120.1 107 EEDKNALDRRFEEAEKTLHSLSETTKSLSQRTEKNQDDLDAALDDLEETLSTLRRDSDQRDREIARI 173
                 55667899******************99999999999******************987766666665 PP

  == domain 3  score: 1.8 bits;  conditional E-value: 0.57
      CHDCT2  63 klleqalvieeqlrraallnlqeekekvgslaqrfaelellaeshqkllkesaagnknana 123
                 k l q+l + ++ +  +l +l ee ++ +sl+q++++ ++  +s + ++ + ++  +++na
  EPX71120.1 183 KTLPQSLEMIQKSQEESLKKLAEEVKQLQSLQQNHSTSTNNFDSANFTTDDIEQKPNPQNA 243
                 5566677666666666666667777777777777777666666666665555555555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (270 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2491  (0.138937); expected 358.6 (0.02)
Passed bias filter:                      798  (0.0445089); expected 358.6 (0.02)
Passed Vit filter:                       128  (0.00713927); expected 17.9 (0.001)
Passed Fwd filter:                        53  (0.0029561); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              42  [number of targets reported over threshold]
# CPU time: 0.78u 0.29s 00:00:01.07 Elapsed: 00:00:00.43
# Mc/sec: 1885.46
//
Query:       EPX71121.1  [L=296]
Description: alkB protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.1e-40  138.5   0.0    5.9e-40  137.6   0.0    1.6  1  2OG-FeII_Oxy_2  2OG-Fe(II) oxygenase superfamily


Domain annotation for each model (and alignments):
>> 2OG-FeII_Oxy_2  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.6   0.0   3.3e-44   5.9e-40      35     196 .]     122     291 ..      56     291 .. 0.91

  Alignments for each domain:
  == domain 1  score: 137.6 bits;  conditional E-value: 3.3e-44
  2OG-FeII_Oxy_2  35 gkrvsvqqtllgplgwatdgpgyrysekesvdakplspfpeallrlverlvkaag.pegwspnaalvnfYrdgariglHqDkeesaleapivSlS 128
                     +k+  v++  +++l+w+t+g++y+++ek+  d +  +pfp+ l  +ve+lv+    +++w+++aa+vnfY++++ +++H+D++e++l+ p++SlS
      EPX71121.1 122 TKPATVERLIQKKLRWVTLGEQYDWTEKVYPDPALSPPFPTRLASFVEDLVQSYTdYPKWKAEAAIVNFYSPSDTLSAHVDRSEEDLTLPLISLS 216
                     45556677888*****************88899999***************97668*************************************** PP

  2OG-FeII_Oxy_2 129 LGasatfrfgkesreeeiiailLesGdllvmggesrkayHgvprikkdtapele.......leelrtrRinlTfR 196
                     +G  +++++g+ sr+e + a++L+sGd+++m+g+sr+a+H+vp+i+ +t p+++        +  +t+R+n+++R
      EPX71121.1 217 IGLDCIYLIGGSSRSEVPMALRLHSGDVVIMTGPSRQAFHAVPKILASTIPSYLltesdqwNRWIQTKRVNFNIR 291
                     ***************************************************9999999999888999******99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (296 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       340  (0.0189637); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 2070.36
//
Query:       EPX71122.1  [L=669]
Description: ER protein folding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   5.3e-105  351.4  13.9   5.3e-105  351.4  13.9    1.4  2  DUF747    Eukaryotic membrane protein family


Domain annotation for each model (and alignments):
>> DUF747  Eukaryotic membrane protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.2      0.33     6e+03     294     309 ..     198     213 ..     149     223 .. 0.60
   2 !  351.4  13.9    3e-109  5.3e-105       3     318 ..     240     604 ..     238     605 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 0.33
      DUF747 294 liwlvLlllkvllsll 309
                 l +++Ll ++++ls+l
  EPX71122.1 198 LYVFTLLPVRIFLSIL 213
                 2233333344444433 PP

  == domain 2  score: 351.4 bits;  conditional E-value: 3e-109
      DUF747   3 paekadllrlllilisvlllslvDtSrvYHyiRaqsfiKLyvvfnvLEvvdrLlsslgqdildalfstttlerekegeeelskllklvlqfllalayvl 101
                 + +k dl++++l+l +++l+ ++D+Sr+YH+iRaq+ i++yv++nvLE++drL+ +lgqd+ld+lf+  +l+ +       s +l+++ +++++lay++
  EPX71122.1 240 RCRKIDLIKISLLLWTSILIRRLDVSRLYHVIRAQASIRFYVLYNVLEIADRLCGALGQDVLDCLFADYNLSFQFFD---ISGWLRFFYYYFISLAYMV 335
                 56799****************************************************************97555544...89***************** PP

      DUF747 102 lHslvlliqvltLnvainSsenaLltllvsnnfvEiKstVFKkfekenlfqivaaDvvERfqllllllivllrnlte.........ssseatslaevls 191
                 lH+lvll+q++tLnv++nS++na l+ll+sn++vEiK++VFKkfekenlfq++++Dv+ERfq++++++++++rnlte            + + l+++++
  EPX71122.1 336 LHTLVLLYQIVTLNVTVNSYSNAVLALLMSNQMVEIKGSVFKKFEKENLFQLTCSDVIERFQITVMAIVIFFRNLTEmyttssldaPLITFDRLKTLMA 434
                 *****************************************************************************9999999985568899****** PP

      DUF747 192 plllvlllEvlVDwvKhayllKFNnikpsvyeeyldvllkDvllsrtkqaqaevpckafvafshiltrrlGfmelplvtliirvlpqvlslll...... 284
                 p+++v+++E++VDw+Kha+++KFN +kps+y +++dvl++D++    +      p+++++ +s+ ++rr+G+++lplv+++ir+++q++s++       
  EPX71122.1 435 PFFWVIGSELVVDWLKHAFIIKFNYVKPSIYGRFTDVLCHDYVAAGGR------PTQTITGKSQHVARRMGLPVLPLVCVFIRTSMQTWSMFRsthsmk 527
                 *******************************************98555......7899***************************************** PP

      DUF747 285 ...........................................llstlvlalliwlvLlllkvllsllllkfaikrk 318
                                                            +l+  + +++++++Ll+lk++l+++ll+fa +r+
  EPX71122.1 528 qeiaksmgvllptgdnyiyylpkgqsqvyniekepswesiflsWLQGKAGIAILFFILLMLKLILGMALLSFAQSRY 604
                 ****************************************9996677777777899******************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (669 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       952  (0.0530983); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.23s 00:00:00.85 Elapsed: 00:00:00.42
# Mc/sec: 4764.83
//
Query:       EPX71123.1  [L=101]
Description: iron sulfur cluster assembly protein Isd11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.7e-13   48.7   0.6    1.1e-12   47.8   0.2    1.6  2  Complex1_LYR    Complex 1 protein (LYR family)
    1.5e-05   25.6   0.8    1.8e-05   25.4   0.8    1.1  1  Complex1_LYR_2  Complex1_LYR-like
  ------ inclusion threshold ------
      0.056   14.0   0.1      0.071   13.7   0.1    1.2  1  Complex1_LYR_1  Complex1_LYR-like
      0.088   12.6   0.9        0.3   10.9   0.2    2.0  2  ETC_C1_NDUFA5   ETC complex I subunit conserved region


Domain annotation for each model (and alignments):
>> Complex1_LYR  Complex 1 protein (LYR family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.8   0.2   2.4e-16   1.1e-12       4      57 ..       9      61 ..       6      63 .. 0.93
   2 ?   -1.8   0.0      0.73   3.3e+03      24      36 ..      85      97 ..      76      99 .. 0.73

  Alignments for each domain:
  == domain 1  score: 47.8 bits;  conditional E-value: 2.4e-16
  Complex1_LYR  4 LsLYRalLRearkfpdyntreyfrrriRdeFrknkhvtDpekieellkkgreeL 57
                  ++LYR l+++a+ fp + +rey  rr+Rd+F+  k+vtDp+++ e+ +++r +L
    EPX71123.1  9 IHLYRDLMKTAKLFPYT-YREYTLRRTRDKFKGLKNVTDPSQVHEFEQEARHLL 61
                  79*************55.5*******************************9988 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.73
  Complex1_LYR 24 eyfrrriRdeFrk 36
                  +++  +++++F+ 
    EPX71123.1 85 DNAEVNVKKSFEN 97
                  5667788888885 PP

>> Complex1_LYR_2  Complex1_LYR-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.8   3.9e-09   1.8e-05       2      67 ..       9      74 ..       8      97 .. 0.85

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 3.9e-09
  Complex1_LYR_2  2 lsLYrrllrelrel.ppelrslgdayvraefrrhkhlknpeeialflknqreYaellerynpglkmt 67
                    ++LYr l++ ++ l p + r++  ++ r+ f+  k++++p ++++f ++ r+ + +++r+    +m 
      EPX71123.1  9 IHLYRDLMKTAK-LfPYTYREYTLRRTRDKFKGLKNVTDPSQVHEFEQEARHLLGIVQRQTTLNGMY 74
                    78*********8.66******************99*************************5544444 PP

>> Complex1_LYR_1  Complex1_LYR-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   1.6e-05     0.071       3      54 ..       8      62 ..       6      92 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.6e-05
  Complex1_LYR_1  3 klrlyrallkaarrfPlrsrreivaeevraafrhpln..dslttke..vdyklllg 54
                     ++lyr+l+k+a+ fP    re      r +f+   n  d  + +e  ++ + llg
      EPX71123.1  8 FIHLYRDLMKTAKLFPYTY-REYTLRRTRDKFKGLKNvtDPSQVHEfeQEARHLLG 62
                    578*************975.679999999999943221144444443344555555 PP

>> ETC_C1_NDUFA5  ETC complex I subunit conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.2   6.7e-05       0.3       9      56 ..       5      50 ..       1      59 [. 0.83
   2 ?    0.4   0.0      0.13   5.9e+02      34      49 ..      67      82 ..      53      97 .. 0.55

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 6.7e-05
  ETC_C1_NDUFA5  9 reaLialytktLkkLkkiPessvYRqsvEaltkhRlkiVeeeedveki 56
                   r++ i+ly+   k+ k +P  ++YR+++   t++++k +++ +d  ++
     EPX71123.1  5 RQTFIHLYRDLMKTAKLFP--YTYREYTLRRTRDKFKGLKNVTDPSQV 50
                   8999***************..57************9999985555444 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.13
  ETC_C1_NDUFA5 34 qsvEaltkhRlkiVee 49
                   q + + + ++ ++V e
     EPX71123.1 67 QTTLNGMYNKRNLVVE 82
                   4443333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       679  (0.0378716); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 766.62
//
Query:       EPX71124.1  [L=639]
Description: Ash2-trithorax family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.9e-10   38.7   1.6      1e-07   32.1   0.0    3.1  4  SPRY      SPRY domain
     0.0014   18.5   8.0     0.0026   17.6   8.0    1.5  1  PHD       PHD-finger


Domain annotation for each model (and alignments):
>> SPRY  SPRY domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1       0.9     8e+03      35      49 ..      23      37 ..      16      50 .. 0.70
   2 !   32.1   0.0   1.1e-11     1e-07       2      73 ..     378     449 ..     377     455 .. 0.91
   3 !    4.4   0.1    0.0043        39      80     107 ..     513     538 ..     510     550 .. 0.76
   4 ?   -1.9   0.0      0.39   3.5e+03     100     118 ..     551     569 ..     540     571 .. 0.79

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 0.9
                SSTTEEEEETETTEE CS
        SPRY 35 ddrgswglcgdngtr 49
                +d+  +++cg + + 
  EPX71124.1 23 NDQNQYCYCGKDRNL 37
                577789999966554 PP

  == domain 2  score: 32.1 bits;  conditional E-value: 1.1e-11
                 EEEEEEET...CCTSSEEEEEEEETTSSSSSTSSSTSSTTEEEEETETTEEEEETESCEEEESSSSTTSEEEEEE CS
        SPRY   2 hyfevkiq...saeggsisvGlateqtdlsdksgegddrgswglcgdngtrtsaeqskaygkqparegdviGval 73 
                 +yfevk++   +++g+++++Gla+++++l  +   g d +s+gl+   g++++ ++  a  + ++++gd+iG  +
  EPX71124.1 378 WYFEVKVEkggGHDGSHVRIGLARREAPL--DAPVGYDAYSYGLRDVGGQKVHMSRPRAFME-SFGTGDIIGFHV 449
                 9***************************4..44458***************99999999999.*********765 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.0043
                 EEEEETTEEEEEEEESTTTSSEEEEEEE CS
        SPRY  80 lsFtkngknlgvaFrnvrgaelfPvvsl 107
                 ++ +kng ++g+aF+n+ +  + P  s+
  EPX71124.1 513 IKVYKNGSYMGTAFENLLD--FTPLNSI 538
                 5669***********8766..7777666 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 0.39
                 SEEEEEEE.STCEEEEESS CS
        SPRY 100 elfPvvslgngaslkinlg 118
                   +P++s+  g + ++ +g
  EPX71124.1 551 GYYPAISMYGGGIARFQFG 569
                 789******9999999998 PP

>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   8.0   2.9e-07    0.0026       1      50 [.      28      78 ..      28      80 .. 0.86

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 2.9e-07
                SBTTTTSTTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSS..TBSSTTTH CS
         PHD  1 rCavCkkksdeeeelvqCdgCkrwfHqkClkppleseekpeg..ewlCekCk 50
                +C  C+k+ + +    qC +C++ fH +Cl+pp +s    ++   ++C+ C+
  EPX71124.1 28 YC-YCGKDRNLKFPDAQCRTCQNFFHLSCLTPPCNSMTGFSTnyTFTCRLCS 78
                58.8999555566778*******************99888888999*****7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (639 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       495  (0.0276089); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.29s 00:00:00.86 Elapsed: 00:00:00.46
# Mc/sec: 4184.39
//
Query:       EPX71125.1  [L=347]
Description: palmitoyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.5e-33  113.7  13.9    6.5e-33  113.7  13.9    3.1  3  DHHC      DHHC palmitoyltransferase


Domain annotation for each model (and alignments):
>> DHHC  DHHC palmitoyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -8.2  16.1         1   1.8e+04      51     124 ..       7      99 ..       1     108 [. 0.46
   2 ?   -1.0   6.9     0.098   1.8e+03      47      80 ..      70     109 ..      67     137 .. 0.47
   3 !  113.7  13.9   3.7e-37   6.5e-33       5     133 ..     157     287 ..     153     288 .. 0.85

  Alignments for each domain:
  == domain 1  score: -8.2 bits;  conditional E-value: 1
        DHHC  51 Fllfllylllllilalvlllialvklveeekkseflavtllkk............................llsilllvlsllfllllgllllfhlyli 121
                 +llf+ +++ ++++ l+ +l +++++v  + +  fl +   kk                            +   l+    +lf+l ++++++f++ + 
  EPX71125.1   7 YLLFVAIVSAFVFILLFGQLRIFRHTVIGKLNRLFLLWLP-KKlsqldnkllhgkgyvfyrissnyvffqkH--SLV----VLFYLCIVSFCIFNFLY- 97 
                 4455555555555555556666666665555555554433.3357888899988888888765443332111..111....22222222222222222. PP

        DHHC 122 lrn 124
                  ++
  EPX71125.1  98 -HG 99 
                 .33 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.098
        DHHC  47 NykyF....llfllylllllilalv..lllialvklveee 80 
                 Ny +F    l++l+yl+++++ ++    +  ++++++++ 
  EPX71125.1  70 NYVFFqkhsLVVLFYLCIVSFCIFNflYHGRTITNQYHKL 109
                 6666655554444444444444333003333333333332 PP

  == domain 3  score: 113.7 bits;  conditional E-value: 3.7e-37
        DHHC   5 lkfCstcniykpprskHcrvCnrcvlrfDHhCpwlnnciGerNykyFllfllylllllilalvlllialvklveeekksef.lavtllkk.llsilllv 101
                 ++ C+tc+  kp+rskHcr Cn+cv +fDHhC+w+nnc+G++N +yF+lfll++l++ ++ ++++ +++ +  ++  ks    ++  +++      +++
  EPX71125.1 157 PRTCETCKFLKPARSKHCRLCNCCVQKFDHHCIWINNCVGRNNIRYFFLFLLSTLQIQLYGVFCIGFHFNRVRDSTLKSLLvSWWAAITAeRQLGSVFL 255
                 689*********************************************************999777777666555544443033333333567789999 PP

        DHHC 102 lsllfllllgllllfhlylilrnlTtieamkk 133
                 +s++  ++++++l++++yl++ ++Tt+e  k+
  EPX71125.1 256 ISVFSSVIVFSFLCYEFYLVYAGYTTNESEKW 287
                 9***************************8765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (347 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       937  (0.0522617); expected 358.6 (0.02)
Passed bias filter:                      312  (0.017402); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 2333.68
//
Query:       EPX71126.1  [L=459]
Description: bystin family U3 and U14 snoRNA associated protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.1e-133  445.1   0.2   1.5e-133  444.6   0.2    1.2  1  Bystin    Bystin


Domain annotation for each model (and alignments):
>> Bystin  Bystin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  444.6   0.2  8.4e-138  1.5e-133       2     291 ..     160     451 ..     159     452 .. 0.96

  Alignments for each domain:
  == domain 1  score: 444.6 bits;  conditional E-value: 8.4e-138
      Bystin   2 eerktLadlilekieekeaekesklekee...eeeeeeeldpkvvevYekvgelLsrYksGklpkafkilpslknWeellaltePekWtpnavyeatri 97 
                 e++++L dli++ki+e ea+++ +   ++   eee +  l+pkv+ev++kvg lLs+Y+sGk+pkafki+p+l+nWee+l++t+P++Wtp+a+yeatri
  EPX71126.1 160 EQSTNLSDLIMQKISEAEARSRGEHIPTAeeeEEEAMPPLPPKVIEVFSKVGVLLSKYRSGKIPKAFKIIPTLSNWEEILYITRPDTWTPHACYEATRI 258
                 6899**************9998554443323466777889*********************************************************** PP

      Bystin  98 fvsnlkekkaqrflelvllprvrddieenkkLnvhlyeaLkkalykpaaffkgillPLvesgtctlreaaivgsvlakvsipvlhsaaallklaeleys 196
                 f+snlk+ +aq+fl++++l+rvr+di++nkkLn+hly+aLkkalykp+affkg+l+PLv+++ c+lreaaivgsvl kvs+pvlhsaaall+l+e++++
  EPX71126.1 259 FISNLKPIQAQHFLNVIILERVREDIQTNKKLNYHLYMALKKALYKPSAFFKGFLFPLVSEN-CSLREAAIVGSVLVKVSVPVLHSAAALLRLTEFDVN 356
                 ***********************************************************766.************************************ PP

      Bystin 197 gatslfirvlldKkyaLpykvvdalvfhFlrfreekrelpvlwhqsllvfaqrYknditedqkeaLldllkkkkhkkitpeirrellasksrgve 291
                 ga s+fir+lldKkyaLpykv+d+lvf+F+r+++  r l+vl hqs+lvfaqrYk dit +qk+aLl+++++k+h++i+peirrel++s srg+e
  EPX71126.1 357 GASSVFIRILLDKKYALPYKVLDSLVFYFMRWKALDRPLAVLEHQSMLVFAQRYKFDITPEQKDALLEVVRVKGHYSIGPEIRRELVNSASRGEE 451
                 ********************************************************************************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (459 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       898  (0.0500865); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.99
# Mc/sec: 1403.21
//
Query:       EPX71127.1  [L=1929]
Description: ATP-dependent RNA helicase Slh1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   6.4e-133  441.7   2.1    1.5e-76  257.0   0.5    2.4  2  Sec63         Sec63 Brl domain
    2.3e-53  180.5   2.2    1.4e-28   99.8   1.1    2.8  2  DEAD          DEAD/DEAH box helicase
    1.8e-26   93.2   0.3    6.8e-12   45.7   0.3    2.6  2  ResIII        Type III restriction enzyme, res subunit
    1.1e-16   61.1   0.0    2.9e-06   27.6   0.0    4.3  2  Helicase_C    Helicase conserved C-terminal domain
    2.7e-06   27.8   1.9      0.005   17.2   0.8    2.6  2  AAA_19        AAA domain
    1.5e-05   25.3   4.7       0.24   11.7   0.0    4.5  3  AAA_22        AAA domain
     0.0014   18.1   0.0      0.057   12.9   0.0    2.4  2  PhoH          PhoH-like protein
  ------ inclusion threshold ------
      0.023   14.4   0.0        6.3    6.5   0.0    3.3  3  IstB_IS21     IstB-like ATP binding protein
       0.03   14.5   0.2      0.091   12.9   0.2    1.8  1  Helicase_PWI  N-terminal helicase PWI domain
      0.064   13.2   0.0       0.15   12.0   0.0    1.5  1  Mesd          Chaperone for wingless signalling and trafficki
       0.24   11.1   2.9        5.1    6.8   0.0    3.3  4  AAA_11        AAA domain
       0.27   10.6   1.6         12    5.2   0.1    4.0  6  TniB          Bacterial TniB protein


Domain annotation for each model (and alignments):
>> Sec63  Sec63 Brl domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  257.0   0.5     1e-79   1.5e-76       1     256 [.     782    1086 ..     782    1087 .. 0.97
   2 !  183.9   0.0     2e-57   2.9e-54       1     248 [.    1613    1918 ..    1613    1927 .. 0.92

  Alignments for each domain:
  == domain 1  score: 257.0 bits;  conditional E-value: 1e-79
                  ECHHHHHHHHHT--HHHHHHHHHHS-TT--HHHHHHHHHTSGGGGGS---TTHHHHHHHHH.HTSSS--SSSTTSHHHHHHHHHHHHHTT---SSHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       Sec63    1 ptelGriaShYyisyetiklfneslkpnttlkdlLeilssasEFeeipvReeEkkelkkLl.ekvpikvkediespeaKvniLlqayisrlklegsd 96  
                  p++lGriaSh+yisy+t+ ++n  lk++++++d+L++ls+++EF++i+ Re+E kel++L+  ++p++++ +i ++  Kvn++lq+yis+ ++e++ 
  EPX71127.1  782 PKDLGRIASHFYISYQTVTTLNGLLKSKMSEADILSLLSQCTEFSQIKSRENEHKELESLMeRNAPCQLRDSISNTAGKVNVILQSYISKARVEDFT 878 
                  789**********************************************************555********************************* PP

                  HHHHHHHHHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHHHHTS-TT................................................ CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................................................ RF
       Sec63   97 lvsDlkyilqnairilralveillskgwlslalslleLskmveqrlwds................................................ 145 
                  l+sD++y++qna+ri r l+ei+ls+ w+s+  ++l+Lsk++e+r+w +                                                
  EPX71127.1  879 LTSDTNYVAQNAGRISRSLFEIALSRAWASA-FTILNLSKSIEKRQWGFehpllqfdlpndiatklenqysnlsvedlsemssnelgdyvhnkkmgp 974 
                  ******************************9.9**************8889********************************************** PP

                  ........S--EEEEEEECEBTTSEEEEEEEEEESSSS-SCTSSS-CH..TSBEEEEEEEEETTTTEEEEEEEEEESSTTTTTEEEEEEEEEEE-.S CS
                  ........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       Sec63  146 ........lPkleieaevqpitrsklrvevtiereeeeskpdfpwdkk..gksekfwlvvedsendellaikrvtlekkklastqevkleftvplse 232 
                          lP l +ea++ p+t+++lr+++ti+       ++f+wd k  g+s+ fw++veds++ e+l+++ + l+kk  +st ++ ++ft+p+s+
  EPX71127.1  975 tikhcvsrLPLLGVEADLLPLTKNVLRLTLTIN-------AKFTWDMKyhGNSQLFWIFVEDSDGLEILYHELLVLNKK--SSTSPQLMSFTIPVSD 1062
                  *********************************.......9***********************************886..457899********** PP

                  SCCEEEEEEEEESSSSS-EEEEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxx RF
       Sec63  233 pgpkqltvrlisdswlgldqevti 256 
                  p+p+ql++ ++sd+w+g+++  ++
  EPX71127.1 1063 PLPSQLYIVAMSDRWIGAETVTPV 1086
                  *******************99887 PP

  == domain 2  score: 183.9 bits;  conditional E-value: 2e-57
                  ECHHHHHHHHHT--HHHHHHHHHHS-TT--HHHHHHHHHTSGGGGGS---TTHHHHHHHHHHTSSS--S...SSTTSHHHHHHHHHHHHHTT---SS CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxx RF
       Sec63    1 ptelGriaShYyisyetiklfneslkpnttlkdlLeilssasEFeeipvReeEkkelkkLlekvpikvk...ediespeaKvniLlqayisrlkleg 94  
                  pt lG+i+S+Yy+ + t++++ +++k++ +   +L++l++a+EF+++ vR++E+ +++++++ ++++ +    ++ +p++K++iL qa+i+rlkl+ 
  EPX71127.1 1613 PTSLGKIVSYYYLFHHTVRNYVQKVKEEIDFHFALQLLCEATEFDDLAVRHNEDLINAEINKGLKYSAEclqLNMVDPHVKAFILSQAHIGRLKLPI 1709
                  79*************************************************************99999555599*********************** PP

                  HHHHHHHHHHHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHHHHTS-TT.............................................. CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.............................................. RF
       Sec63   95 sdlvsDlkyilqnairilralveillskgwlslalslleLskmveqrlwds.............................................. 145 
                   d+++D+  +l+++iri++a ++++++ g+++++l++++L ++++q+++++                                              
  EPX71127.1 1710 DDYITDTLQVLDQVIRIIQAYIDVAAELGYSQVCLQYMTLLQCFKQACYPDeqyrnalpglhcneekdamkivyqfagksreniekglsknenvfdl 1806
                  *************************************************888********************************************* PP

                  .........S--EEEEEEECEBTTSEEEEEEEEEESSS..S-S....CTSSS-CHTSBEEEEEEEEETTTTEEEEEEEEEESSTTTTTEEEEEEEEE CS
                  .........xxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       Sec63  146 .........lPkleieaevqpitrsklrvevtiereee..esk....pdfpwdkkgksekfwlvvedsendellaikrvtlekkklastqevkleft 227 
                           +P+l+i    ++ +r++ +++v+++r+++  + +    ++fp+ +   +e+f+++v d  ++el+ai+rv+l+ k + ++ + +l+++
  EPX71127.1 1807 saaieklmaYPDLDI----RVSQRESQKLHVSLRRKNKplNPDftisSRFPKPQ---TEGFFVLVVDLATKELFAIRRVSLSGKGQPDRLQLSLTCK 1896
                  ***************....77899**********88775522234455566666...************************9987777777777777 PP

                  EE-.SS.CCEEEEEEEEESSSS CS
                  xxxxxx.xxxxxxxxxxxxxxx RF
       Sec63  228 vplsep.gpkqltvrlisdswl 248 
                  ++++ep +  +++v +++d + 
  EPX71127.1 1897 LEIPEPcRGRKVKVMVVCDGYP 1918
                  88878756689********995 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.8   1.1   9.4e-32   1.4e-28       2     171 ..     274     458 ..     273     463 .. 0.87
   2 !   78.8   0.0   2.7e-25   4.1e-22       2     169 ..    1132    1296 ..    1131    1303 .. 0.84

  Alignments for each domain:
  == domain 1  score: 99.8 bits;  conditional E-value: 9.4e-32
                 HHHHHHHHHHH.TTCEEEEEESTTSSHHHHHHHHHHHHHHHS...............TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETT CS
                 xxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   2 diQaeaiplil.gggdvlvaaeTGsGKTlaflipvlqivyet...............kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliigg 84 
                 +iQ+ ++p+++ +++++l++a+TG+GKT ++l+ +lq++++                  k+  k+++++P+++La ++++++ k++k +++++  ++g+
  EPX71127.1 274 RIQSLVFPIAYkTNENMLICAPTGAGKTDVALLTILQTISNFteklgldeqneerlrVLKDDFKIIYIAPMKALAAEVVEKMDKRLKWLGIKTRELTGD 372
                 79*********6678************************87788899988888877667888**************************99999866665 PP

                 SSHHHHHHHHHTTCSEEEEEHHHHHHHH..HCTSSH.CTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  85 vaardqlskldngvdivvgtpgrlddll..stgkln.lsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpk 171
                  +    +s++ ++++i+v+tp+++d ++  s g  + +++vr++++DE+++l d+ ++  i+++++++++  ++ ++  +++ lSATlp+
  EPX71127.1 373 MQ--LTKSEI-AETQIIVTTPEKWDVVTrkSVGDSQlTEKVRMVIIDEIHMLHDD-RGAVIESLVARTQRFVETSQQMIRIVGLSATLPN 458
                 43..577888.99************977664444445899**************8.************999888888899********95 PP

  == domain 2  score: 78.8 bits;  conditional E-value: 2.7e-25
                  HHHHHHHHHHH.TTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTT.STSEEEEEETTSSHHHHHHHHHT CS
                  xxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD    2 diQaeaiplil.gggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkky.idlrvlliiggvaardqlskldn 96  
                  ++Q + +++++ ++ +v+v a+TGsGKT+a+ ++  +++   ++++  k+++++P+++L+++ ++++ +++ + ++l++  ++g ++   + +++  
  EPX71127.1 1132 AVQTQFFHTVYhTDTNVFVGAPTGSGKTMAAEFATWRAI---QKNPSHKVIYIAPMKALVKERMSDWGSRLVEpMGLSMIELTG-DTNL-DTKTI-M 1222
                  689999999995556*********************999...578999******************977666549988875555.5554.55566.6 PP

                  TCSEEEEEHHHHHHHH...HCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSB CS
                  xxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   97 gvdivvgtpgrlddll...stgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATl 169 
                  +++i+++tp+++d +    +t+k  +++v++++lDE++ l ++ +++ ++ i+++++ i +++++  +++ lS  +
  EPX71127.1 1223 EANIIITTPEKWDGISrswKTRK-YVQDVSLVILDEIHLLGSD-RGPILEMIVSRMNYIASQTNKGVRIVGLSTAV 1296
                  9*************997654444.5*****************8.******************99888888888655 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.7   0.3   4.5e-15   6.8e-12      16     170 ..     272     457 ..     262     458 .. 0.83
   2 !   44.6   0.0     1e-14   1.5e-11      22     153 ..    1143    1279 ..    1118    1296 .. 0.82

  Alignments for each domain:
  == domain 1  score: 45.7 bits;  conditional E-value: 4.5e-15
                 T.............TTSEEEEEESTTSTHHHHHHHHHHHH-S.......................-EEEEESSHHHHHHHHHHGGGGTGG....GEEEE CS
      ResIII  16 leklks.......krdkrglikmaTGtGKTlvaaklierllkkgkee..................kflflvprkslleqtleefkkflseaykeigkkv 89 
                 l+ ++s       k ++++li ++TG+GKT va+ +i +  +++ e+                  k++ ++p k+l     e++ k l+     ++ ++
  EPX71127.1 272 LNRIQSlvfpiayKTNENMLICAPTGAGKTDVALLTILQTISNFTEKlgldeqneerlrvlkddfKIIYIAPMKALAAEVVEKMDKRLKWLG-IKTREL 369
                 44444455556669999****************************99***************************999999999999888653.477889 PP

                 SSS-B--.......-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS......T....TTHH.HHHT---SEEEEEESS-S CS
      ResIII  90 sgdkkkakekdstnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgak.....k....swre.ilekfkeavllglTATpe 170
                 +gd +   ++++ +++i+vtt ++ d     +++  +++l ++  ++iiDE H l+++     +      ++ +  + +   ++gl+AT++
  EPX71127.1 370 TGDMQLT-KSEIAETQIIVTTPEKWDVVT--RKSVGDSQLTEKVRMVIIDEIHMLHDDrgaviEslvaRTQRfVETSQQMIRIVGLSATLP 457
                 9999999.99****************999..55677777888888************86655515555666635666667999******86 PP

  == domain 2  score: 44.6 bits;  conditional E-value: 1e-14
                  .TTSEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--.......-SEEEEEHHHHHHTH CS
      ResIII   22 krdkrglikmaTGtGKTlvaaklierllkkgkeekflflvprkslleqtleefkkflseaykeigkkvsgdkkkakekdstnkkilvttiqsldads 118 
                  + d+++++ ++TG+GKT+ a  +++r  +k++  k++ ++p k+l++  ++++ + l e+    + +++gd++    k + +++i++tt ++ d +s
  EPX71127.1 1143 HTDTNVFVGAPTGSGKTMAAEFATWRAIQKNPSHKVIYIAPMKALVKERMSDWGSRLVEPMGLSMIELTGDTNLD-TKTIMEANIIITTPEKWDGIS 1238
                  778899999********************************************99999987779999*****999.99******************* PP

                  ........HHHTTT-SEEEEETGGGTTS..........TTTHHH CS
      ResIII  119 eeeeeeseellrdrfdviiiDEaHrlgak.........kswrei 153 
                     +++++++  +   ++i DE H lg++         + ++ i
  EPX71127.1 1239 ---RSWKTRKYVQDVSLVILDEIHLLGSDrgpilemivSRMNYI 1279
                  ...8899999999999********99997444333322244444 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   0.0   2.2e-09   3.3e-06       6     109 ..     509     659 ..     505     661 .. 0.73
   2 !   27.6   0.0   1.9e-09   2.9e-06      39     109 ..    1409    1494 ..    1345    1496 .. 0.70

  Alignments for each domain:
  == domain 1  score: 27.4 bits;  conditional E-value: 2.2e-09
                 HHHHHHHTTTTSEEEEEESSHH.HH.................HHHHHH.......................HHHTTSTEEEESTTSTHHHHHHHHHHHH CS
  Helicase_C   6 llellkleeeggkilifvntid.rl.................ekvkll.......................lekkgikvavlhgelpqnereeileqfn 63 
                 + + lkl +eg++++ifv++++ ++                 +    l                       +e +++ + ++++ +  ++r  + + f 
  EPX71127.1 509 FDKVLKLVREGRQVMIFVHSRKeTVksankireqffhegaadY----LdcsthekygllqrevgksknkdlRELFKYGIGIHNAGMLRSDRHLTERLFS 603
                 556678899*************633333444444444444440....25555555555555555443333355559*********************** PP

                 TTSSSEEEESGGGTSSSTSTTESEEEESSSSSSH..........HHHHHHHTTSSS CS
  Helicase_C  64 kgesdvLiatdvaerGidipkvnlVinfdlprnv..........tsyiqriGRtgR 109
                 +g  ++L +t  ++ G+++p   +Vi     +n+           ++ q  GR+gR
  EPX71127.1 604 QGVLKILCCTATLAWGVNLPAYAVVIKGTQLYNPekgsfvdlgvLDVLQIFGRAGR 659
                 **************************655555544455666666***********9 PP

  == domain 2  score: 27.6 bits;  conditional E-value: 1.9e-09
                  T.....TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSS...........SSHHHHHHHHTTSSS CS
  Helicase_C   39 k.....gikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlp...........rnvtsyiqriGRtgR 109 
                  +      + +a +h+ l+  +r+ + e f ++++++Liat+ ++ G++ p ++lVi  +              ++t++ q+ GR+gR
  EPX71127.1 1409 NlklalPFGMALHHAGLTEADRKISEELFVNNKIQILIATSTLAWGVNTP-AHLVIVKGTEyydvkiegykdMDITDVLQMLGRAGR 1494
                  234445789999*************************************9.999995555553333766655557************ PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.8   3.3e-06     0.005       9     130 ..     286     437 ..     281     451 .. 0.75
   2 !    8.8   0.0    0.0013       1.9       7     117 ..    1142    1264 ..    1135    1280 .. 0.65

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 3.3e-06
      AAA_19   9 kekvllvtaGpGtGKTrvlkhivallvelggvkp................eeillvaftgrAakelrerlaalgae.....atTiHrlalldfddllte 86 
                 +++++l+ a+ G GKT v    +   +++ ++k+                 +i+ +a+ +  a e+ e++++   +     ++T    + +++++ +  
  EPX71127.1 286 TNENMLICAPTGAGKTDVALLTILQTISNFTEKLgldeqneerlrvlkddFKIIYIAPMKALAAEVVEKMDK---RlkwlgIKTRELTGDMQLTKSEIA 381
                 6889************98665555555555555567779***********9*******99999998888844...233477777766666666666655 PP

      AAA_19  87 alelle...........eaeeekklqeee.llivDEfqdvdelqyrLlkallgekk 130
                 + +++            ++  +++l+e+  ++i+DE+ ++ +   ++++ l+ +++
  EPX71127.1 382 ETQIIVttpekwdvvtrKSVGDSQLTEKVrMVIIDEIHMLHDDRGAVIESLVARTQ 437
                 555554677777777777778889988889***********999999998886655 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.0013
      AAA_19    7 alkekvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAak.elrerlaalgae...............atTiHrlalldfddlltea 87  
                  ++++++++v a+ G+GKT   +   a + ++++ + ++++ +a+ +  +k ++++  + l ++               ++Ti +  ++ +++++  +
  EPX71127.1 1142 YHTDTNVFVGAPTGSGKTMAAEF--ATWRAIQKNPSHKVIYIAPMKALVKeRMSDWGSRLVEPmglsmieltgdtnldTKTIMEANIIITTPEK--W 1234
                  6788999**********987655..555556666779999999987655415776554445557766666666666666666655443333333..3 PP

      AAA_19   88 lelleeaeeekklqeeellivDEfqdvdel 117 
                   ++ ++ +++k +q+  l+i DE+  +   
  EPX71127.1 1235 DGISRSWKTRKYVQDVSLVILDEIHLLGSD 1264
                  333336667788877779999998766555 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.79   1.2e+03      38      76 ..      78     115 ..      58     141 .. 0.69
   2 !   10.0   0.6   0.00052      0.77       5     115 ..     287     435 ..     283     451 .. 0.59
   3 !   11.7   0.0   0.00016      0.24       6     122 ..    1146    1284 ..    1141    1293 .. 0.53

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.79
      AAA_22  38 erpevvfvtlpsstsskdllrellralglelkaerlsse 76 
                 e+ e+v  t+ ++ s+++l+  + +al++e++     +e
  EPX71127.1  78 EKCEIVCSTMDAELSPSSLFDSIIEALQSENDQ-LTVQE 115
                 466666666667778888888888888888877.32233 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00052
      AAA_22   5 agilvvtGesGtGKTtllrrlleqldeeakaee.........................erpevv.fvtlpsst..sskdl.lrellralglelka.... 70 
                    +++++++G+GKT ++     q  + ++ e+                         +++  +  v+    +  ++  +  rel  +++l +++    
  EPX71127.1 287 NENMLICAPTGAGKTDVALLTILQT-ISNFTEKlgldeqneerlrvlkddfkiiyiapMKALAAeVVEKMD-KrlKWLGIkTRELTGDMQLTKSEiaet 383
                 56789**********9988888875.555555578888888677777555444444322222222222222.235555555555555555555556444 PP

      AAA_22  71 .....erlsseellealeqalrarav........ielliiDEaqhlr..seealeeLrsl 115
                                  ++ + +++v        ++++iiDE++ l   + +++e L+ +
  EPX71127.1 384 qiivtT--------PEKWDVVTRKSVgdsqltekVRMVIIDEIHMLHddRGAVIESLVAR 435
                 444432........4555555555556666666679*********965547777777544 PP

  == domain 3  score: 11.7 bits;  conditional E-value: 0.00016
      AAA_22    6 gilvvtGesGtGKTtllrrlleqldeeakaee.............erpevvfvtlpsst..sskdl.lrellralglelka.........erlssee 77  
                  + ++v +++G+GKT+ ++  + ++ +++++ +             e     ++   +s   ++  l + el  +++l++k+               e
  EPX71127.1 1146 TNVFVGAPTGSGKTMAAEFATWRA-IQKNPSHkviyiapmkalvkE-----RMSDWGSRlvEPMGLsMIELTGDTNLDTKTimeaniiitT----PE 1232
                  66778899******9887655554.444443344554332222220.....2333333233333333333333333333336555544321....22 PP

      AAA_22   78 llealeqalrarav...ielliiDEaqhlr..seealeeLrsllnl..srkg 122 
                   ++ + + +++r+    ++l+i+DE++ l   +  +le ++s++n   s+++
  EPX71127.1 1233 KWDGISRSWKTRKYvqdVSLVILDEIHLLGsdRGPILEMIVSRMNYiaSQTN 1284
                  2222222222222255578**********7655***********98885444 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0     0.061        91      18      45 ..     286     313 ..     271     319 .. 0.79
   2 !   12.9   0.0   3.8e-05     0.057       7      59 ..    1132    1185 ..    1129    1206 .. 0.85

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.061
                 H-SEEEEE--TTSSTTHHHHHHHHHHHH CS
        PhoH  18 kndivfaiGpaGtGKtylavalavealk 45 
                 +n+ + + +p+G+GKt +a+ + ++ ++
  EPX71127.1 286 TNENMLICAPTGAGKTDVALLTILQTIS 313
                 67778899********999988777665 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 3.8e-05
                  HHHHHHHHHHH.H-SEEEEE--TTSSTTHHHHHHHHHHHHTTS-SEEEEEE-S- CS
        PhoH    7 keQkeylealk.kndivfaiGpaGtGKtylavalavealkkkkvkriiltrpav 59  
                  + Q+++++++  + + vf+ +p+G+GKt+ a  +  +a++k+  +++i++ p+ 
  EPX71127.1 1132 AVQTQFFHTVYhTDTNVFVGAPTGSGKTMAAEFATWRAIQKNPSHKVIYIAPMK 1185
                  568888888884555799999****************************99875 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.0    0.0042       6.3      45      65 ..     285     305 ..     267     314 .. 0.82
   2 ?    3.5   0.0     0.034        51      46      86 ..    1144    1187 ..    1132    1195 .. 0.76
   3 ?   -3.2   0.0         4     6e+03     104     121 ..    1245    1262 ..    1238    1266 .. 0.75

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0042
   IstB_IS21  45 ekkenivllGpsGvGKshlai 65 
                 +++en++++ p+G+GK+ +a 
  EPX71127.1 285 KTNENMLICAPTGAGKTDVAL 305
                 689**************8885 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.034
   IstB_IS21   46 kkenivllGpsGvGKshlaialgveavrag..lsvlfvr.vedL 86  
                  +  n+ +  p+G GK+  a     +a++++  ++v+++  +++L
  EPX71127.1 1144 TDTNVFVGAPTGSGKTMAAEFATWRAIQKNpsHKVIYIApMKAL 1187
                  456888888*******999999999**97533778887524445 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 4
   IstB_IS21  104 krllkvdllilDdlgllp 121 
                  k ++ v+l+ilD++ ll 
  EPX71127.1 1245 KYVQDVSLVILDEIHLLG 1262
                  4566789******98765 PP

>> Helicase_PWI  N-terminal helicase PWI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.2   6.1e-05     0.091      14      77 ..      75     140 ..      68     167 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 6.1e-05
  Helicase_PWI  14 WLqrelkkiyk..Dae.eaqelaeevleiLkseadelrelEnkLvelldydkfdliklllknrekiv 77 
                   WL+ +++ +++  Dae    +l ++++e+L+se+d+   ++++L++ll++++++l +++ +   +i+
    EPX71127.1  75 WLKEKCEIVCStmDAElSPSSLFDSIIEALQSENDQ-LTVQEDLLNLLGFENVELLSQIFEKSSSIL 140
                   8888888877777777345678899********766.99********************99988886 PP

>> Mesd  Chaperone for wingless signalling and trafficking of LDL receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0    0.0001      0.15      36      82 ..     494     539 ..     487     546 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.0001
                 XSXSSTHCCHCSTSSXHHHHHHHXSSSEEEEEEEESSSSSHHHHHHH CS
        Mesd  36 rpspkidlskldpsnPeellklskkGktlmvfvtvsgdpteketeei 82 
                 + spk+  s++d +  +++lkl + G+ +m+fv+ ++++  k +++i
  EPX71127.1 494 KGSPKVVSSNVDEACFDKVLKLVREGRQVMIFVHSRKET-VKSANKI 539
                 56899999*************************977654.4455555 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.0    0.0034       5.1       2      74 ..     272     355 ..     271     368 .. 0.68
   2 ?    2.7   0.4     0.062        92     187     225 ..     374     417 ..     353     420 .. 0.70
   3 ?   -2.1   0.0       1.8   2.6e+03       3      33 ..    1131    1161 ..    1130    1194 .. 0.64
   4 ?   -3.1   0.0       3.6   5.4e+03     187     225 ..    1215    1257 ..    1211    1257 .. 0.71

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0034
      AAA_11   2 lndsqreaiksalseseitliqGPPGtgKTktivellsqllsr...........rkseeeksakpriLvCapSNaAvDellerl 74 
                 ln+ q   +  a++++e  li  P G gKT + +  + q +s+           ++  +  + + +i + ap  a   e++e++
  EPX71127.1 272 LNRIQSLVFPIAYKTNENMLICAPTGAGKTDVALLTILQTISNfteklgldeqnEERLRVLKDDFKIIYIAPMKALAAEVVEKM 355
                 788888888899999999************554444444443333335554432225566677777777777777777777776 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.062
      AAA_11 187 sleeevldeaeivltTlsgagsklleklak.....kfdvviIDE 225
                 +l+++ + e++i++tT  + +  + +++ +     k+++viIDE
  EPX71127.1 374 QLTKSEIAETQIIVTTPEKWDVVTRKSVGDsqlteKVRMVIIDE 417
                 55699999********87664333333322334459*******9 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 1.8
      AAA_11    3 ndsqreaiksalseseitliqGPPGtgKTkt 33  
                  n+ q + +++++ ++  + +  P G+gKT +
  EPX71127.1 1131 NAVQTQFFHTVYHTDTNVFVGAPTGSGKTMA 1161
                  6777777788888887777888888888843 PP

  == domain 4  score: -3.1 bits;  conditional E-value: 3.6
      AAA_11  187 sleeevldeaeivltTlsg....agsklleklakkfdvviIDE 225 
                  +l ++ + ea+i++tT  +    + s + +k+ +++ +vi DE
  EPX71127.1 1215 NLDTKTIMEANIIITTPEKwdgiSRSWKTRKYVQDVSLVILDE 1257
                  677889999*******764211155667777777888888887 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.47   7.1e+02      67      98 ..      77     108 ..      66     128 .. 0.85
   2 ?   -0.0   0.0      0.33     5e+02      20      51 ..     272     303 ..     259     331 .. 0.82
   3 ?    5.2   0.1    0.0083        12     119     133 ..     409     423 ..     383     453 .. 0.82
   4 ?   -3.9   0.0         5   7.5e+03      73      98 ..     681     706 ..     675     714 .. 0.76
   5 ?   -2.4   0.0       1.7   2.6e+03      37      70 ..    1147    1179 ..    1143    1200 .. 0.74
   6 ?   -2.8   0.0       2.4   3.6e+03     119     133 ..    1249    1263 ..    1247    1297 .. 0.67

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.47
        TniB  67 aekvpvlvvqappkpdekrlyaaiLealgapl 98 
                 +ek++++   +  + + + l+++i+eal+ + 
  EPX71127.1  77 KEKCEIVCSTMDAELSPSSLFDSIIEALQSEN 108
                 688999**********************9874 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.33
        TniB  20 lerLeeLleypkrkrmpnlllvGdsnnGKtmi 51 
                 l+r+++L+     k  +n+l++ ++  GKt +
  EPX71127.1 272 LNRIQSLVFPIAYKTNENMLICAPTGAGKTDV 303
                 555666655555556699************87 PP

  == domain 3  score: 5.2 bits;  conditional E-value: 0.0083
        TniB 119 kvrvLiiDEihnlla 133
                 kvr++iiDEih l  
  EPX71127.1 409 KVRMVIIDEIHMLHD 423
                 89*********8865 PP

  == domain 4  score: -3.9 bits;  conditional E-value: 5
        TniB  73 lvvqappkpdekrlyaaiLealgapl 98 
                 + v + ++p e+r+ ++++++l+a++
  EPX71127.1 681 VSVVTQQTPIESRFTERLVDNLNAEI 706
                 45556777888888888888888876 PP

  == domain 5  score: -2.4 bits;  conditional E-value: 1.7
        TniB   37 nlllvGdsnnGKtmivekFarlhppekdedaekv 70  
                  n+ +  ++  GKtm + +Fa  +  +k+++++ +
  EPX71127.1 1147 NVFVGAPTGSGKTMAA-EFATWRAIQKNPSHKVI 1179
                  666777999****976.57777777776666554 PP

  == domain 6  score: -2.8 bits;  conditional E-value: 2.4
        TniB  119 kvrvLiiDEihnlla 133 
                  +v ++i+DEih l +
  EPX71127.1 1249 DVSLVILDEIHLLGS 1263
                  57899*****97755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1929 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       633  (0.0353059); expected 358.6 (0.02)
Passed bias filter:                      506  (0.0282224); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 1.10u 0.33s 00:00:01.43 Elapsed: 00:00:00.53
# Mc/sec: 11031.05
//
Query:       EPX71128.1  [L=197]
Description: SNARE Ykt6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.7e-14   52.3   0.7    5.2e-14   51.8   0.7    1.2  1  Synaptobrevin  Synaptobrevin
    3.8e-13   49.3   0.0    6.4e-13   48.5   0.0    1.4  1  Longin         Regulated-SNARE-like domain


Domain annotation for each model (and alignments):
>> Synaptobrevin  Synaptobrevin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.8   0.7   5.8e-18   5.2e-14       2      59 ..     135     192 ..     134     197 .] 0.95

  Alignments for each domain:
  == domain 1  score: 51.8 bits;  conditional E-value: 5.8e-18
                    XXHHHHHHHHHHCCCCHHCCHHHHCHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHH CS
  Synaptobrevin   2 ndklakikaevdevkdimkeNidkvlergekldeLvdktenLqssaqqFkkqarklkr 59 
                    +d+++++++e+de+kd++++ i++vl+rgekld+L  +++nL+s+++ F k+a+k++ 
     EPX71128.1 135 ADTIMRVQQELDETKDVLHRTIESVLARGEKLDDLIARSDNLSSQSRMFYKSAKKQNS 192
                    799***************************************************9875 PP

>> Longin  Regulated-SNARE-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.5   0.0   7.2e-17   6.4e-13       2      72 ..      45     112 ..      44     124 .. 0.84

  Alignments for each domain:
  == domain 1  score: 48.5 bits;  conditional E-value: 7.2e-17
      Longin   2 klilkkishss.pqkltythdsytfhylaed.gltylviadesyprrlaFafLeeikreFlakygtaktadaa 72 
                 k++ ++    s +q++ +++++y+fh++ ++ gl+ ++ +d++yp r+a+++L+++ +eF++k ++  +++++
  EPX71128.1  45 KTVTERT---SpGQRQDVEESDYVFHVYNRSdGLCGVIASDKEYPLRVAYTLLNKLLDEFVTKNPR--QKWES 112
                 6677775...2479*****999*******866*********************************5..44553 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       751  (0.0418874); expected 358.6 (0.02)
Passed bias filter:                      553  (0.0308439); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1397.23
//
Query:       EPX71129.1  [L=202]
Description: vacuolar sorting protein Did2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      7e-14   51.8  11.9    9.5e-14   51.4  11.9    1.2  1  Snf7        Snf7
  ------ inclusion threshold ------
      0.015   15.2   3.7      0.022   14.7   3.7    1.2  1  Ist1        Regulator of Vps4 activity in the MVB pathway
      0.032   13.9   0.0      0.057   13.1   0.0    1.3  1  DMSP_lyase  Dimethlysulfonioproprionate lyase


Domain annotation for each model (and alignments):
>> Snf7  Snf7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.4  11.9   1.6e-17   9.5e-14       6     160 ..      11     169 ..       7     199 .. 0.89

  Alignments for each domain:
  == domain 1  score: 51.4 bits;  conditional E-value: 1.6e-17
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTCCH CS
        Snf7   6 LrkaerkldkkqeslekkikkleaelkklakkgnkdralllLKqkkryekqldqldnqlanleqvslaienlksnkevlnamkqgakamkamnkkvdid 104
                 L+ a ++l+k++ +  k++  +++++kk + kgn++ a++++   +r  ++  +l + ++++++vs  ++++ ++ +v  +m ++ + m ++++ +++d
  EPX71129.1  11 LKFAAKSLNKQSIKASKEERTEREKVKKAIIKGNQEVAQIYASNAIRKQQESLNLLKLSSRIDAVSSRLQTAVTMRSVSGNMASVVRGMDKAMQSMNLD 109
                 6778899******************************************************************************************** PP

                 HHHHHHHHHHHHHHHHTCHHHHHHHHHTT-..GGTTHHHHHHHHHHHHHHHHHCSH...H CS
        Snf7 105 kidklmdeiedqmekaeeisEalsrsldda..deedEeeleaeLdaLeqelgdeell..d 160
                  i ++md +e q +  +   + + +++++a   +   e ++  ++ +++e g e  +  +
  EPX71129.1 110 RISQIMDKFESQFDDVDVQTDYMHKTMGSAtaVDTPQENVDLLMQSVADEAGLEFNQnmN 169
                 ****************************99555555788888888888887776633332 PP

>> Ist1  Regulator of Vps4 activity in the MVB pathway
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   3.7   3.8e-06     0.022       3     162 ..      10     161 ..       9     163 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 3.8e-06
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTT--SSSSSHHHHHHHHHHHHHH-TT CS
        Ist1   3 qlklaiqrlkllqkkkealakqarrdiaqlLengkeekArirveqliredillelleilelycelllarlsllekqkeldeelkEAvssliyAaprvse 101
                 +lk+a + l+    k ++  + +r+ + + + +g++e A+i + + ir ++    l  l   ++ + +rl++  +++ ++ ++   v+++  A + +  
  EPX71129.1  10 HLKFAAKSLNKQSIKASKEERTEREKVKKAIIKGNQEVAQIYASNAIRKQQESLNLLKLSSRIDAVSSRLQTAVTMRSVSGNMASVVRGMDKAMQSM-- 106
                 7999*********************************************998888888899999******999998888888777777776666666.. PP

                 TTTHHHHHHHHHTTS-HHHHHHHHTT-T.T--HHHHHHHS-----HHHHHHHHHHHHHHHT CS
        Ist1 102 lkELkelrdllaekyGkefakaavenkdngVnekvvkklsvktpskelvekylkeIAkeyn 162
                   +L  +++ +++k+ ++f++  v+ ++++ ++++ +   v+tp++  v+ +++++A+e +
  EPX71129.1 107 --NLDRISQ-IMDKFESQFDD--VDVQTDYMHKTMGSATAVDTPQE-NVDLLMQSVADEAG 161
                 ..8888865.57899999943..44455589999999999999876.57799***999976 PP

>> DMSP_lyase  Dimethlysulfonioproprionate lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   9.5e-06     0.057       5      72 ..      71     138 ..      68     143 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 9.5e-06
  DMSP_lyase   5 svarvfarlatalperdrqgerlPvvkhleaalalaeedalralvralkalepaLeweqsyseadasa 72 
                  +++v++rl+ta  +r + g+  +vv+ +++a+++ + d ++++++ +++  +++  ++ y ++++++
  EPX71129.1  71 RIDAVSSRLQTAVTMRSVSGNMASVVRGMDKAMQSMNLDRISQIMDKFESQFDDVDVQTDYMHKTMGS 138
                 578999********************************************999999999888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1822  (0.101623); expected 358.6 (0.02)
Passed bias filter:                      552  (0.0307881); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.30s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 1324.58
//
Query:       EPX71130.1  [L=447]
Description: transcription factor TFIIH complex subunit Tfb2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   1.2e-138  462.0   0.0   1.5e-138  461.6   0.0    1.1  1  Tfb2          Transcription factor Tfb2
    2.3e-23   82.4   0.0    5.7e-23   81.1   0.0    1.7  1  Tfb2_C        Transcription factor Tfb2 (p52) C-terminal doma
    0.00057   20.0   0.0    0.00099   19.3   0.0    1.4  1  Helicase_C_3  Helicase conserved C-terminal domain


Domain annotation for each model (and alignments):
>> Tfb2  Transcription factor Tfb2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  461.6   0.0  2.5e-142  1.5e-138       1     355 []      11     360 ..      11     360 .. 0.96

  Alignments for each domain:
  == domain 1  score: 461.6 bits;  conditional E-value: 2.5e-142
        Tfb2   1 eyleklpettlerLYkspatclaifrlLpslakqlvmrllylekpvplsdlekwvkkeskkekeealkkLkelhilkekklkekkqelklnptFkkslr 99 
                 ++le+lp+  + rLY++pa+cla+frlLp la+q+vm++l+++ pv+lsd++ w k +sk  ++e+++kL ++hi++ +     +q++ ln++F+k++ 
  EPX71130.1  11 DFLEQLPN--HARLYQKPAACLAVFRLLPILARQYVMSMLFNPMPVALSDFDLWTKMSSKVYQSESFNKLVSMHIFQFD-----GQHIILNDEFRKQFI 102
                 68999887..679***************************************************************886.....479************ PP

        Tfb2 100 kaltgggeeksfgvpseeedkekvdvefLdkyakekWesilhflvgseeeeepskevlelLkasglveekeskkslkItseGFqFlLqdinaQiwtlll 198
                 +altggg+++sfgvp+ +edk++vd++fLdkyake We+ilhf+vg+ e + p ++vl+lL+++gl++  +  ++l+It++GFqFlLqdin+Qiwtlll
  EPX71130.1 103 TALTGGGNHNSFGVPCIDEDKHRVDLDFLDKYAKETWETILHFMVGTPEGKYPGEGVLSLLRRGGLMTGPK--NQLRITHSGFQFLLQDINTQIWTLLL 199
                 *************************************************999***************5554..59************************ PP

        Tfb2 199 qylkaleergmdlvevlsflfqLsslelgkaYsvealsetqkemledLrdlGLvyqrkkkskrFypTrlattLts....sssessseskeegfiivETN 293
                 +ylk +e+++md+ +vl+flf+L+slelg++Ysv+ l++tq+ mledLr++G+vyqrk++skrFypTrlat+Lt+     + +++++++++gfiivETN
  EPX71130.1 200 EYLKLSEDTHMDPIQVLHFLFMLGSLELGRDYSVDFLTDTQQIMLEDLREYGIVYQRKTTSKRFYPTRLATSLTTdahsLEGAKNDNDADKGFIIVETN 298
                 ***************************************************************************998733566778899********* PP

        Tfb2 294 frvyAYtssplqialLslFvklkyrfpnlvvgkitresvreAlknGItadqIisyLeshahp 355
                 +r+yAYtssplqia++ lF++l+++f nlvvg itr+s+r+Al nGI a+qIi+yL++hahp
  EPX71130.1 299 YRLYAYTSSPLQIAIIGLFANLRAKFSNLVVGVITRDSIRRALMNGIAAEQIITYLSTHAHP 360
                 *************************************************************8 PP

>> Tfb2_C  Transcription factor Tfb2 (p52) C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.1   0.0   9.5e-27   5.7e-23       1      68 []     375     442 ..     375     442 .. 0.99

  Alignments for each domain:
  == domain 1  score: 81.1 bits;  conditional E-value: 9.5e-27
      Tfb2_C   1 DQIrLWekernRlkaeegvlyddFesqadfeevleyakelgvllwedeekrllvvkeeghesvkefik 68 
                 DQI+LWe e+nRlka++g+l++dF +  +f++++eyakelgvl+w+++ kr+++++++g + + +f+k
  EPX71130.1 375 DQIYLWELEKNRLKATPGILFRDFLTDMEFDQAVEYAKELGVLVWDSSIKRMFFITTAGAQPMIAFLK 442
                 9**************************************************************99987 PP

>> Helicase_C_3  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   1.7e-07   0.00099      24      71 ..     313     360 ..     293     377 .. 0.85

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 1.7e-07
  Helicase_C_3  24 aLaafAelesrpehahtyrltplSlrrAldaGltaeeiiefLerlsky 71 
                    +  fA+l  + +++ +  +t+ S+rrAl  G+ ae+ii++L+++++ 
    EPX71130.1 313 IIGLFANLRAKFSNLVVGVITRDSIRRALMNGIAAEQIITYLSTHAHP 360
                   5677888888888999999**************************963 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (447 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       348  (0.0194099); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 3085.47
//
Query:       EPX71131.1  [L=159]
Description: acyl-CoA thioesterase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.4e-13   48.9   0.0    8.7e-13   48.4   0.0    1.2  1  4HBT      Thioesterase superfamily


Domain annotation for each model (and alignments):
>> 4HBT  Thioesterase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.4   0.0   4.8e-17   8.7e-13       1      74 [.      59     132 ..      59     137 .. 0.95

  Alignments for each domain:
  == domain 1  score: 48.4 bits;  conditional E-value: 4.8e-17
                 TSSB-HHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEEEEESS-.BBTTCEEEEEEEEEEEESSEEEEEEEEEETT CS
        4HBT   1 gGvvhgGvylallDeaagaalrslggrgilvvvvelsidflrp.vrlgdeltvearvlrlgrtsavvevevrded 74 
                 +G++hgG+++al D ++++al+s+g++    v ++++ +fl++ ++lg+ ++++a++ rlg+++a+++v++ +e 
  EPX71131.1  59 MGNLHGGCIAALTDLGGSLALASRGLF-VSGVSIDMNQTFLKSgGTLGSQILLHAKCDRLGSNIAFTSVDFLTEA 132
                 69*************************.***************9*************************998775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       320  (0.0178482); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.43
# Mc/sec: 1110.28
//
Query:       EPX71132.1  [L=202]
Description: ChaC-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-62  210.9   0.0    1.6e-62  210.7   0.0    1.0  1  ChaC      ChaC-like protein


Domain annotation for each model (and alignments):
>> ChaC  ChaC-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  210.7   0.0   9.2e-67   1.6e-62       1     178 [.      10     197 ..      10     198 .. 0.98

  Alignments for each domain:
  == domain 1  score: 210.7 bits;  conditional E-value: 9.2e-67
                 EEEEESSHHHHS--TT-SEEEEEEEETEEEEEEEEESSSSS-SSS-EEEEEEEEHHH.............-EEEEEEEEE-GGGGGGGGGGGGGSTT.. CS
        ChaC   1 lwvfgYGSLiwkpdfeytesrravihgyaRrfwlsstdhRGteekPGrvltLiedee.............gstiGvvyripaeeaeevleyLeeRElvt 86 
                 +w+fgYGSLiw+p+ +y+ s++++++gy+Rrfw++s+dhRGt ekPGrvltLi++ee             + ++G+++ripa  a+e ++yL++RE+  
  EPX71132.1  10 FWIFGYGSLIWHPPPKYDLSIPCYLRGYVRRFWMKSEDHRGTVEKPGRVLTLIPYEEwkqfsdwahtpydEGCWGMAFRIPAPFAKEIRAYLDDREI-- 106
                 6******************************************************99***************************************8.. PP

                 TTEEEEEEEEEE-EETTTS-EEEEEEEEEE-TTSTTB--S--HHHHHHHHHH-EETTEEHHHHHHHHHHHHHTS-----BHHHHHHHHHHHH CS
        ChaC  87 nGytlkevevylkkdakeekvvlealvyvatikneqyagdedleeiAkviaaaaGpsGsnaeYlfelakaleklgigirDehLeeleelvkk 178
                 nGyt ++v+vy+ +  ++++++ ++lvyv+t++++q++++e++ee+  +i++++G+sG+n+ Ylfela+al++l+++++D h+ +le++vkk
  EPX71132.1 107 NGYTPHDVPVYA-HIGDKKPILDHCLVYVGTSNSPQFQPSETVEELSDLISTRKGKSGPNYIYLFELANALRHLSPESKDTHVYKLEAAVKK 197
                 ***********8.77899************************************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       382  (0.0213063); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.43
# Mc/sec: 1421.10
//
Query:       EPX71133.1  [L=546]
Description: mediator complex subunit Srb4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.7e-69  232.8   2.7    9.4e-69  232.3   2.7    1.2  1  Med17     Subunit 17 of Mediator complex
  ------ inclusion threshold ------
      0.036   14.4   3.4        1.6    9.1   0.1    2.9  3  TBCA      Tubulin binding cofactor A
      0.043   12.1   1.6      0.059   11.6   0.4    1.6  2  RAP1      Rhoptry-associated protein 1 (RAP-1)


Domain annotation for each model (and alignments):
>> Med17  Subunit 17 of Mediator complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  232.3   2.7   1.6e-72   9.4e-69      36     457 ..      30     447 ..       3     452 .. 0.82

  Alignments for each domain:
  == domain 1  score: 232.3 bits;  conditional E-value: 1.6e-72
                 -SS-CCHHHCCHHCCCHCCHHHHHHCHHHHHHHCCHHHHHSS-S---GG.........GTTCHHHHHHHHHGGG...SSHHHHHHHHHHHHHHHHHHHH CS
       Med17  36 yevfgqekLaqliprIlqergefrdlsEesLreeiekekqqkeekdeee.........eeeeeeeekkeDaedklltqeefaklrkemiekinlAknes 125
                  +   + +L q++++I+qerg+frdl E++L++++e+e++ ++     +              ++++  D+   +    ++  +++e+i++i +A+ne+
  EPX71133.1  30 RNLAPEIDLPQIFQKIVQERGNFRDLDESELEKQLEDEQDFTKTLPGRQdpyygftilP----TQQEANDV---SSGSTNIHDYKRELIDHILIAQNEC 121
                 455667899*****************************999876655557898643331....33333444...223349******************* PP

                 HHHHHHHHHHCTTCHCCCCHCCSSHHHCCCTHCCHCCCCCHHHHHHHHSHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTCCC CS
       Med17 126 slaLdfisLLlSkvressaassmSpfLkkvvppgSLnadkvpkpkktkkeklelevlnkGwklksLneardllkkaaakLkkevekEhkyWkeiqnisn 224
                 slaLd+ sLLlSk ++  +++++SpfLk++vppgSL+ +++  p    + k+++++l+ +wk+ksLn++++ll +a ++L+k+v +E++y++ +   ++
  EPX71133.1 122 SLALDMTSLLLSKYKQF-SSDTISPFLKSTVPPGSLGLERCHPP----EIKESDNILATCWKRKSLNSSKNLLSDAKERLSKVVDSEREYFQSL--SNV 213
                 ***************99.556***********************....66777888**************************************..999 PP

                 CCCCEEEEECCCCCC.CEEEECCCCCHCC-..SEEEEEEEECTTTCCEEEC-SSSSSSEEEEEEEEEC.TTTSSEEEEEE----SS----TTCHHHHHH CS
       Med17 225 kdvgwklrdkstger.slgvkygyedsgstfkdrgiAeLrrndegsklllvpllgskekflrVriftkieseddyilsgessldeslkesdsdirkqie 322
                 +d  w+l+ +++ ++ ++ ++y+  ++ s     g++ +r+++ +++  +   l+++++ lrV+ +++     +++++++s++d + + +++++  +i+
  EPX71133.1 214 RDSSWPLVLSNKRGNyDVSIQYSALGGTSL----GLGLIRKDQAKQSYNFETGLAHEKARLRVDLISS-----SEKVISSSKWDWNWGIEEDPLLVKIQ 303
                 ******9988776666**************....*******************************544.....6667777777777************* PP

                 HHHHHHHHHHHHHHHHHHHHHCCCCTEEECCCCEEEEC.SSCCCEEEEE........CCCCEGGGTSTTTTTTTTHHHHHHCHHHHHHHHHHHHHHHHH CS
       Med17 323 eakktiFekELfyelkkEaqqLisygVeiennkiviel.pnekleielv........slddsslvnheqdapksndkranlilitlrllLvvifkknlr 412
                  a+++++e+++++ l++Eaq + ++gV +++++i +   ++  l i+l         s +d s+v+++++  +++    +  + +++ +++++f + +r
  EPX71133.1 304 SAQQVLLEMDVWNALLQEAQICENQGVVFTGDTIYLSCaSEFSLRISLDtsaeesgnSSEDMSDVEQQEEYDEETKALLQRCCNSVNAIIHILFLQYCR 402
                 **************************************7444444444444788787777777777776666666666666666666666666666666 PP

                 HC...CTCCCHCTSSSSSCHHCTTTCHHHHHHHHHHHHHHHHHHHHHC CS
       Med17 413 kr...lasskttakasrslpkdillLrPilgklrhenyvdllrkilkk 457
                 +    l++ + ++  ++s+p    ++rP+++++  ++++ +++k+l++
  EPX71133.1 403 NPtrkLQQAELAMVIDPSAP---QIIRPLIFYYAIHEETRQFQKWLQN 447
                 55334677777788888878...5**********************86 PP

>> TBCA  Tubulin binding cofactor A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1         1     6e+03      60      84 ..      41      67 ..      38      72 .. 0.50
   2 ?    5.0   0.0     0.005        30      47      76 ..     179     208 ..     165     217 .. 0.81
   3 ?    9.1   0.1   0.00027       1.6      35      67 ..     360     392 ..     350     410 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1
        TBCA 60 lkkrlekavekLeelleee..eeleet 84
                + +++ ++  ++++l e+e  ++le++
  EPX71133.1 41 IFQKIVQERGNFRDLDESEleKQLEDE 67
                555555555555555554444444433 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.005
        TBCA  47 eevleetkamipdlkkrlekavekLeelle 76 
                 ++ l+ +k++++d+k+rl+k v++ +e+ +
  EPX71133.1 179 RKSLNSSKNLLSDAKERLSKVVDSEREYFQ 208
                 6789999************99987666655 PP

  == domain 3  score: 9.1 bits;  conditional E-value: 0.00027
        TBCA  35 dgdedeydlkkqeevleetkamipdlkkrleka 67 
                 +++ed  d+++qee  eetka+++ + + +++ 
  EPX71133.1 360 NSSEDMSDVEQQEEYDEETKALLQRCCNSVNAI 392
                 4457899******************98876665 PP

>> RAP1  Rhoptry-associated protein 1 (RAP-1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.13   7.8e+02     328     359 ..     360     391 ..     342     401 .. 0.73
   2 ?   11.6   0.4   9.9e-06     0.059     547     594 ..     489     534 ..     473     541 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.13
        RAP1 328 lkekeakvlGvsvkyeeyqesilytcpnssfl 359
                 +    + ++    +y+e  +++l  c ns++ 
  EPX71133.1 360 NSSEDMSDVEQQEEYDEETKALLQRCCNSVNA 391
                 44456777778889999999999999999986 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 9.9e-06
        RAP1 547 klyseiqknpeel.yekltwiyeniymlkrdytalalktvckylehdks 594
                  l ++iq np     ek  w y++ y    +y + ++kt+c+y+eh ++
  EPX71133.1 489 SLNADIQHNPTMHgTEKTVWKYKDAYN---YYKFSSVKTLCQYIEHVRN 534
                 56789*****86438***********5...9***************866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (546 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       662  (0.0369234); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.44
# Mc/sec: 3690.56
//
Query:       EPX71134.1  [L=215]
Description: hypothetical protein SOCG_01352 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       444  (0.0247643); expected 358.6 (0.02)
Passed bias filter:                      299  (0.0166769); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1645.78
//
Query:       EPX71135.1  [L=190]
Description: ADP-ribosylation factor Sar1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.6e-66  223.0   0.0    1.8e-66  222.9   0.0    1.0  1  Arf        ADP-ribosylation factor family
    2.4e-11   43.4   0.0    2.7e-08   33.4   0.0    2.1  2  G-alpha    G-protein alpha subunit
    9.3e-09   35.0   0.0    1.2e-08   34.6   0.0    1.1  1  SRPRB      Signal recognition particle receptor beta subunit
    6.8e-07   29.5   0.0    1.9e-06   28.1   0.0    1.7  1  Roc        Ras of Complex, Roc, domain of DAPkinase
    2.1e-06   27.8   0.0      4e-06   26.9   0.0    1.5  2  MMR_HSR1   50S ribosome-binding GTPase
    2.3e-05   24.1   0.0    2.9e-05   23.7   0.0    1.1  1  Ras        Ras family
    0.00077   18.9   0.0    0.00084   18.8   0.0    1.1  1  Gtr1_RagA  Gtr1/RagA G protein conserved region
  ------ inclusion threshold ------
      0.089   12.5   0.0       0.41   10.4   0.0    2.0  3  PduV-EutP  Ethanolamine utilisation - propanediol utilisation
       0.13   12.6   0.0       0.23   11.8   0.0    1.3  1  DUF1840    Domain of unknown function (DUF1840)
       0.19   11.3   0.0         11    5.6   0.0    2.1  2  cobW       CobW/HypB/UreG, nucleotide-binding domain
       0.23   11.0   0.0         16    5.0   0.0    2.1  2  GTP_EFTU   Elongation factor Tu GTP binding domain


Domain annotation for each model (and alignments):
>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  222.9   0.0   1.1e-69   1.8e-66       2     175 .]       8     190 .]       7     190 .] 0.96

  Alignments for each domain:
  == domain 1  score: 222.9 bits;  conditional E-value: 1.1e-69
                 HHHHHGGTT.TTEEEEEEEESTTSSHHHHHHHHHHSSCEECSSSSSEEEEEEEETTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHH CS
         Arf   2 lsilaklklkkkelrilllGLDnaGKtTilkklkleelvttvPTigfnveeleiknlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleea 100
                 ++ la l l++k++++l+lGLDnaGKtT+l++lk+++l+ ++PT+++++eel+i +++ft++D+GG++++R+lW++Yf+++++++++vD++d eRl+e+
  EPX71135.1   8 YDALAALGLVNKHAKMLFLGLDNAGKTTLLHMLKNDRLAVMQPTLHPTSEELAIGKVRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLSES 106
                 678999********************************************************************************************* PP

                 HHHHHHHCTSGCCTTSEEEEEEE-TTSTTSS-HHHHHHHTTGGG.........SSSSSSEEEEEEBTTTTBTHHHHHHHHHHHH CS
         Arf 101 keeLkalleeeelkevallvlaNKqDlpealseeelrellglee.........lkgkrkleiqkcsavkgeglkeglewlsesi 175
                 k+eL+all++eel++v++l+l+NK+D+p+a+se+el+++lgl++         + g r++e+++cs+v ++g+ eg++wl++++
  EPX71135.1 107 KAELDALLAMEELAKVPFLILGNKIDAPGAISEDELKAALGLYQttgkgvskpVPGIRPIEVFMCSVVLRQGYGEGFKWLAQYV 190
                 ********************************************777775555559************************9985 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   0.0   0.00061         1      22      44 ..      19      41 ..      13      45 .. 0.89
   2 !   33.4   0.0   1.7e-11   2.7e-08     180     280 ..      43     132 ..      40     133 .. 0.91

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00061
                .EEEEEEEESTTSSHHHHHHHHH CS
     G-alpha 22 revkllllGqseSGKsTilkqlk 44
                ++ k+l+lG +  GK+T+l  lk
  EPX71135.1 19 KHAKMLFLGLDNAGKTTLLHMLK 41
                478****************9887 PP

  == domain 2  score: 33.4 bits;  conditional E-value: 1.7e-11
                 HHHCS-----SEEEEEEECT-TEEEEEEEE-SSHHHHHGTCCCTTTECEEEEEEEGGGTT-B-SS-TTSBHHHHHHHHHHCCCC-GGGTTSEEEEEEE- CS
     G-alpha 180 DilkarlktvGisetkfevdsklefrivdvgGqrserkkWvpffddvdaiiFlvslsefdqvlyedekvnrleeslklFkeicnnkllkntpiiLflnK 278
                 D l + ++t+  +  ++ ++ k++f+ +d+gG+++ r+ W  +f +v+ i++lv + +f           rl es +  ++++  ++l+++p++++ nK
  EPX71135.1  43 DRLAVMQPTLHPTSEELAIG-KVRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDF----------ERLSESKAELDALLAMEELAKVPFLILGNK 130
                 77788889999999999999.**************************************..........478888999999999999999999999999 PP

                 HH CS
     G-alpha 279 lD 280
                 +D
  EPX71135.1 131 ID 132
                 99 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.6   0.0   7.5e-12   1.2e-08       3     137 ..      20     146 ..      18     148 .. 0.82

  Alignments for each domain:
  == domain 1  score: 34.6 bits;  conditional E-value: 7.5e-12
                 --EEEEE-STTSSHHHHHHHHHHSS---B---SS-EEETTG...GGTT-SEEEETT-GCCSHHHHHHHHHHGGEEEEEEEEETTS-HHHHHHHHHHHHH CS
       SRPRB   3 kpavllvGlsdsGKTslftrLttdsvkktvtSqessaalkvksekgskltliDfPGheklrqklleklkaksslkglvfvvDStidpkevkevAEllye 101
                 + ++l++Gl ++GKT+l++ L +d     +  +++++ +      + ++t  D+ Gh++ r    +   +  ++ g+v++vD   +++  ++ AEl   
  EPX71135.1  20 HAKMLFLGLDNAGKTTLLHMLKNDRLAVMQPTLHPTSEELA--IGKVRFTTFDLGGHQQARRLWRD---YFPEVNGIVYLVDCCDFERLSESKAELDAL 113
                 6789********************88777777766554443..57789***********9865555...5889**********************8544 PP

                 HHHHHHHHTT---EEEEEE-TTSTT---HHHHHHHH CS
       SRPRB 102 illiteklkdavdiliACnKqelflakspklikdaL 137
                 ++++      +v++li  nK +   a s+  +k aL
  EPX71135.1 114 LAMEE---LAKVPFLILGNKIDAPGAISEDELKAAL 146
                 43333...478***********99999988888877 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.1   0.0   1.1e-09   1.9e-06       1     119 [.      22     132 ..      22     133 .. 0.74

  Alignments for each domain:
  == domain 1  score: 28.1 bits;  conditional E-value: 1.1e-09
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEEGHHHHCH...H CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvydsrssenl...k 96 
                 K++++G  ++GKt+ll+ + +d+     ++t+  +   +e+          ++ kv++  +D++G+++ r l + y+ e + +++++d  ++e+l   k
  EPX71135.1  22 KMLFLGLDNAGKTTLLHMLKNDRLAVM-QPTLHPTS--EEL----------AIGKVRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLsesK 107
                 899****************99998655.45554433..232..........234699****************************99966665551113 PP

                 HHHHHHHHHCS..SS-EEEEEE-TT CS
         Roc  97 eWlkelkkvag..kspvilvgnkiD 119
                   l+ l ++ +  k p++++gnkiD
  EPX71135.1 108 AELDALLAMEElaKVPFLILGNKID 132
                 444444444432267899******9 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   0.0   2.4e-09     4e-06       2     113 ..      23     129 ..      22     130 .. 0.73
   2 ?   -3.1   0.0       5.1   8.3e+03      51      62 ..     131     142 ..     131     152 .. 0.63

  Alignments for each domain:
  == domain 1  score: 26.9 bits;  conditional E-value: 2.4e-09
                 EEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEETT....TTCSHHHHHH CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseekglgkaflaleeadlillvvdas....eeklkpldee 96 
                 ++++G  N+GK+tL+  l +++  v    + T++++ +++++++ +++  D+ G  +   + ++l +++    e++ i+++vd+         ++ + e
  EPX71135.1  23 MLFLGLDNAGKTTLLHMLKNDRLAV---MQPTLHPTSEELAIGKVRFTTFDLGG-HQ---QARRLWRDYFP--EVNGIVYLVDCCdferL---SESKAE 109
                 6799****************98876...67899999999999999*********.33...44567777775..789*******8875441...444444 PP

                 HHHHHHH...TTSEEEEEEE CS
    MMR_HSR1  97 leellee...akkplilvln 113
                 l +ll     ak p++++ n
  EPX71135.1 110 LDALLAMeelAKVPFLILGN 129
                 44433222346677776666 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 5.1
                 EECGGCSSHHHH CS
    MMR_HSR1  51 vDtpGliegase 62 
                 +D pG i++++ 
  EPX71135.1 131 IDAPGAISEDEL 142
                 799998763333 PP

>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.0   1.8e-08   2.9e-05       1     117 [.      22     134 ..      22     155 .. 0.87

  Alignments for each domain:
  == domain 1  score: 23.7 bits;  conditional E-value: 1.8e-08
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeikr 99 
                 K++++G  + GKt+ll+   +d+    +++T+    + ++ e+   +v+++ +D  G ++ ++l + y+ +++gi+ + d  + e +++ k  ++ +  
  EPX71135.1  22 KMLFLGLDNAGKTTLLHMLKNDRL-AVMQPTL----HPTSEELAIGKVRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLA 115
                 8899************99887776.5789***....5555566667899************************************9*999999999999 PP

                 HST.TTSEEEEEEETTTGG CS
         Ras 100 vae.envpivLvGnKvDle 117
                 + e  +vp++++GnK+D  
  EPX71135.1 116 MEElAKVPFLILGNKIDAP 134
                 888888***********76 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   5.2e-07   0.00084       1     123 [.      22     133 ..      22     173 .. 0.78

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 5.2e-07
   Gtr1_RagA   1 kvLLmGksgsGKtsmrsiiFdnylardtlrlgatidveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDvesreleedletlk 99 
                 k+L++G  ++GKt++  ++           ++ t + + +e+   g++ +  +D+gG ++           + f +v+ ++y++D+   ++e  l++ k
  EPX71135.1  22 KMLFLGLDNAGKTTLLHML----KNDRLAVMQPTLHPTSEEL-AIGKVRFTTFDLGGHQQARRL-----WRDYFPEVNGIVYLVDCC--DFE-RLSESK 107
                 89************97654....3344456778888888888.79************9987555.....5788*************9..544.456666 PP

   Gtr1_RagA 100 eilealrqyspeakvfvli..hKmDl 123
                   l+al  +++ akv  li  +K+D 
  EPX71135.1 108 AELDALLAMEELAKVPFLIlgNKIDA 133
                 77777777777777765553477775 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00025      0.41       3      27 ..      22      46 ..      20      53 .. 0.90
   2 ?   -1.9   0.0       1.5   2.5e+03      91     116 ..      87     111 ..      84     117 .. 0.82
   3 ?   -3.0   0.0       3.3   5.4e+03      40      50 ..     130     140 ..     127     150 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00025
   PduV-EutP  3 killiGkvgsGKttLtqalkgeelk 27
                k+l++G  ++GKttL + lk+++l 
  EPX71135.1 22 KMLFLGLDNAGKTTLLHMLKNDRLA 46
                899*****************99875 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.5
   PduV-EutP  91 eviGiitkidlaedeenieaveelLk 116
                 ev Gi+  +d + d e+++ ++ +L 
  EPX71135.1  87 EVNGIVYLVDCC-DFERLSESKAELD 111
                 677999999999.8888888888775 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 3.3
   PduV-EutP  40 viDtPGeylen 50 
                  iD+PG   e 
  EPX71135.1 130 KIDAPGAISED 140
                 69999976654 PP

>> DUF1840  Domain of unknown function (DUF1840)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00014      0.23      13      46 ..     113     146 ..     104     154 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00014
     DUF1840  13 vimfedvakqllkllgkslterGaitaedlpaai 46 
                 ++ +e+ ak  + +lg++++++Gai++++l+aa+
  EPX71135.1 113 LLAMEELAKVPFLILGNKIDAPGAISEDELKAAL 146
                 56789999999*********************98 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.024        39      11      22 ..      31      42 ..      23      59 .. 0.75
   2 ?    5.6   0.0    0.0067        11     111     155 ..      87     136 ..      74     152 .. 0.73

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.024
                CCHHHHHHHHHC CS
        cobW 11 sGKTtLlnhlle 22
                +GKTtLl  l +
  EPX71135.1 31 AGKTTLLHMLKN 42
                9*****976643 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.0067
                 CECEEEEEEETTTH.....CCHCCHHHHHHHHHHTSSEEEE.E-HHHHCH CS
        cobW 111 tldavvavvDaknl....eaeeekieekaedqlaaadllvl.nKtDllde 155
                 +++++v++vD+  +    e++ e  + +a ++la+  +l+l nK+D   +
  EPX71135.1  87 EVNGIVYLVDCCDFerlsESKAELDALLAMEELAKVPFLILgNKIDAPGA 136
                 5789*******9998887555566666666666666655544****7655 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.1     0.014        22       2      24 ..      19      41 ..      18      60 .. 0.83
   2 ?    5.0   0.0    0.0097        16      71     140 ..      65     143 ..      49     189 .. 0.67

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.014
                CEEEEEEEESTTSSHHHHHHHHH CS
    GTP_EFTU  2 rirnigiighvDhGKtTLtdrLl 24
                ++ ++ ++g  ++GKtTL+  L 
  EPX71135.1 19 KHAKMLFLGLDNAGKTTLLHMLK 41
                68889999999*******98775 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.0097
                 EEEEEEESSSGGGHHHHHHHHHT-SEEEEEEETTTB.....STHHHHHHHHHHHHTTTEEEEEEESCGST....HHHHH CS
    GTP_EFTU  71 linliDtPGHvdFskevirglrvlDgavlvvdaveG.....vepqteevlrlalkegvpiivfiNKmDrl....kaelk 140
                 +++  D  GH++  +        ++g v +vd+ +       ++    +l +    +vp+ ++ NK+D +    ++elk
  EPX71135.1  65 RFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFerlseSKAELDALLAMEELAKVPFLILGNKIDAPgaisEDELK 143
                 5666677777776666666677788888888888433332255555556666666788899999****99544433333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       378  (0.0210832); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1474.91
//
Query:       EPX71136.1  [L=302]
Description: cortical component Lsb5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-27   95.9   0.0    5.6e-27   94.3   0.0    1.9  3  VHS       VHS domain
    4.2e-08   33.4   0.9    9.1e-08   32.3   0.9    1.6  1  GAT       GAT domain


Domain annotation for each model (and alignments):
>> VHS  VHS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.3   0.0   6.2e-31   5.6e-27       2     139 ..       8     143 ..       7     145 .. 0.97
   2 ?   -3.7   0.0       1.1   9.6e+03      81      98 ..     173     190 ..     170     204 .. 0.60
   3 ?   -2.5   0.0      0.46   4.1e+03      42      57 ..     237     252 ..     211     254 .. 0.67

  Alignments for each domain:
  == domain 1  score: 94.3 bits;  conditional E-value: 6.2e-31
                 HHHHHHHHHHHHHT-TT-SS--HHHHHHHHHHHHCSTCHHHHHHHHHHHHHT-SSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHHCTTT CS
         VHS   2 ssasslekliekATdeslreedlslileicDlinekeagpkeavrlikkkinsknphvallaLklldalvkNcGskfhleiaskeflnelvklilekkn 100
                 ++ ++++++i+k T  + +e+dls i+e+++++  ++ gp+ea+r+i+kk+++ + +v+++aL +l+al++N+Gs+f ++++++++ +++  ++++  +
  EPX71136.1   8 KPVTAVTTYIDKMTVGTRDENDLSGIVELTEVVGLTSSGPREAARTIRKKLKYGERNVQIRALLVLQALIENAGSRFVENFSDEKLEERIFLCATSPAY 106
                 577899*******************************************************************************************99 PP

                 CHCS.HHHHHHHHHHHHHHHTTT-TTGHHHHHHHHHHHH CS
         VHS 101 sklakvkkkvlelleeWadafknkpelkkisdvykllkr 139
                  k+  v+ ++ +l++ W+ +++n + +++ s + k+l +
  EPX71136.1 107 PKE--VRIRAYSLIKLWQSEYSNVRGMESLSGLAKKLPS 143
                 998..*************************999999876 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 1.1
                 HHTSHHHHHHHHHHHHCT CS
         VHS  81 eiaskeflnelvklilek 98 
                 ++a  +++n+l ++ +++
  EPX71136.1 173 NMAATNLTNTLAQINPQR 190
                 566677777777744333 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 0.46
                 HHHHHHHHHHHT-SSH CS
         VHS  42 keavrlikkkinsknp 57 
                  +a+++ k k+n+++ 
  EPX71136.1 237 VKAMDSYKEKLNHNEH 252
                 3566666666666655 PP

>> GAT  GAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.3   0.9     1e-11   9.1e-08       4      73 ..     176     245 ..     173     249 .. 0.93

  Alignments for each domain:
  == domain 1  score: 32.3 bits;  conditional E-value: 1e-11
         GAT   4 aklLsemLsstepd.eellenellkeLyetckamqpriqklieetadeedllaelLqlNDeLnnvlerYer 73 
                 a+ L+  L++ +p+ e++++n  +   y  ck+ ++ + ++ie+++de   la+lL++NDe+ +++  Y++
  EPX71136.1 176 ATNLTNTLAQINPQrEDPAHNKQIMMYYVDCKRCHRPLLRYIEAIQDEM-WLANLLKTNDEVVKAMDSYKE 245
                 6678999999998899*********************************.9******************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       802  (0.044732); expected 358.6 (0.02)
Passed bias filter:                      528  (0.0294495); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2149.77
//
Query:       EPX71137.1  [L=292]
Description: Mde2 protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (292 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       697  (0.0388756); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 2256.24
//
Query:       EPX71138.1  [L=136]
Description: mediator complex subunit Med10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.1e-32  110.7   1.2    4.7e-32  110.5   1.2    1.0  1  Med10           Transcription factor subunit Med10 of Mediato
  ------ inclusion threshold ------
      0.014   15.4   0.1       0.27   11.4   0.0    2.3  2  TAFH            NHR1 homology to TAF
      0.026   13.2   0.6      0.083   11.5   0.1    1.8  2  DHC_N1          Dynein heavy chain, N-terminal region 1
      0.032   12.9   0.0      0.034   12.8   0.0    1.1  1  efThoc1         THO complex subunit 1 transcription elongatio
       0.04   13.0   0.1       0.05   12.7   0.1    1.3  1  DNA_pol_A       DNA polymerase family A
      0.067   13.4   0.1        8.2    6.7   0.0    2.1  2  DUF29           Domain of unknown function DUF29
       0.16   12.6   0.0       0.27   11.8   0.0    1.3  1  CbeA_antitoxin  CbeA_antitoxin, type IV, cytoskeleton bundlin


Domain annotation for each model (and alignments):
>> Med10  Transcription factor subunit Med10 of Mediator complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.5   1.2   1.8e-35   4.7e-32       2     120 ..       8     123 ..       7     124 .. 0.97

  Alignments for each domain:
  == domain 1  score: 110.5 bits;  conditional E-value: 1.8e-35
                 HHHHHHHHHHHHHHHHHHS--TT.S-TTHHHHHHHHHHHHHHHHHHHHH..HH--EEEHHHHHHHHTTB-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       Med10   2 qqlkeviqsllelgvqvsdydenessqevlaqklktlvesLqelsktaskllqdikiPlelieyvenGrNPdiYtrefvelvrrkNqlmkGkmeafkkf 100
                 ++l+++ qsl++l +++++ +++ +  +++ ++++tlv++L++l k as  +++  i +++++yve+GrNPd+Y r+f elv+++Nq+++Gk + +++f
  EPX71138.1   8 NKLEDTTQSLYDLALVIYNLEDT-TPPDTIPENISTLVNHLRTLPKIAS--KTNEPISQDVLDYVEQGRNPDVYARQFSELVQKDNQYVHGKFKVMEEF 103
                 689******************98.999**********************..7999******************************************** PP

                 HHHHHHHHHHH-GGGHHHHH CS
       Med10 101 rdvLaeelekalPelredve 120
                 +++Laee+++a+P+lr++v+
  EPX71138.1 104 QQTLAEEITSAYPKLRNQVD 123
                 *****************997 PP

>> TAFH  NHR1 homology to TAF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0    0.0001      0.27       4      51 ..      42      89 ..      39      93 .. 0.91
   2 ?    2.8   0.2     0.049   1.3e+02      33      54 ..      91     113 ..      79     118 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.0001
        TAFH  4 KcknFLatLiklagkqspevaenvkeLvqelldgkiepeeftsklqee 51
                 + n L tL k+a+k+++ +++ v + v++  +  + + +f + +q++
  EPX71138.1 42 TLVNHLRTLPKIASKTNEPISQDVLDYVEQGRNPDVYARQFSELVQKD 89
                57899************************************9998875 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.049
        TAFH  33 elldgkiep.eeftsklqeelns 54 
                 + ++gk+++ eef++ l ee+ s
  EPX71138.1  91 QYVHGKFKVmEEFQQTLAEEITS 113
                 478888875499*******9987 PP

>> DHC_N1  Dynein heavy chain, N-terminal region 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   3.2e-05     0.083      85     132 ..       7      55 ..       4      66 .. 0.88
   2 ?    1.8   0.1     0.029        74      44      83 ..      50      88 ..      48     128 .. 0.60

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 3.2e-05
      DHC_N1  85 leeAkdnvkyLktLekpledLest.dleeikellpsllnairliwkiSr 132
                 +++ +d+ + L++L   + +Le+t  +++i+e + +l+n++r   ki+ 
  EPX71138.1   7 ANKLEDTTQSLYDLALVIYNLEDTtPPDTIPENISTLVNHLRTLPKIAS 55 
                 56778999******99*******76*****************9888875 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.029
      DHC_N1 44 LssieeqlkspevkkvlkvLkaaks..syleafkaldtelkk 83
                L +i ++ ++p  + vl++ ++ ++  +y+++f +l +   k
  EPX71138.1 50 LPKIASKTNEPISQDVLDYVEQGRNpdVYARQFSELVQ---K 88
                66677777777778888888777777777777777632...2 PP

>> efThoc1  THO complex subunit 1 transcription elongation factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   1.3e-05     0.034     284     349 ..      42     110 ..       6     132 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.3e-05
     efThoc1 284 t.....qvLsdedakwiketekkvyellkefyppkgkkFseivehllsreenwvkwKnegcpefekpavse 349
                 t     ++L +  +k+ + + + v++++++  +++   +++ + +l ++++++v+ K + ++ef++   +e
  EPX71138.1  42 TlvnhlRTLPKIASKTNEPISQDVLDYVEQ--GRNPDVYARQFSELVQKDNQYVHGKFKVMEEFQQTLAEE 110
                 24444477888899999999**********..77777***************************9984444 PP

>> DNA_pol_A  DNA polymerase family A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   1.9e-05      0.05      33     110 ..      16     103 ..       3     132 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1.9e-05
                 TCCCCHHHHTCCCC.S.TTSBETTSBTTTCCHHHHHT....S...CHHHHHHHHHHHHHHHHHTTTTGGGCCBTTTSEE--EEE....S CS
   DNA_pol_A  33 SpkqlaevLfeklk.lpekkktktgystdeevLekla....k..hplaklileyrelsklkstyvdallklinkktgrihtsfn....q 110
                 S  +la v++ +l+ +++    ++  st  + L +l     k  +p+ +++l+y e ++    y++++ +l++k+++ +h++f+     
  EPX71138.1  16 SLYDLALVIY-NLEdTTPPDTIPENISTLVNHLRTLPkiasKtnEPISQDVLDYVEQGRNPDVYARQFSELVQKDNQYVHGKFKvmeeF 103
                 5556666666.3332333334466666666666666533342668***************************999*******9855441 PP

>> DUF29  Domain of unknown function DUF29
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.0    0.0032       8.2      88     128 ..       3      43 ..       1      51 [. 0.88
   2 ?    5.2   0.0    0.0087        22      63     111 ..      75     123 ..      54     133 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0032
                 -GGGG--H....HHHHHHHHHHHHH-TT--S.....S-SS- CS
       DUF29  88 spsLksyleeeleeaYqdArklasketglaketfPeecpyt 128
                 s +L ++le++ ++ Y  A+     e   + +t+Pe+    
  EPX71138.1   3 SDELANKLEDTTQSLYDLALVIYNLEDTTPPDTIPENISTL 43 
                 6789*******************************997655 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0087
                 TTTTHHHHHHHHHHHHHHHHHH-..-GGGG--H....HHHHHHHHHHHH CS
       DUF29  63 pekrsrswrseireqrkeieklledspsLksyleeeleeaYqdArklas 111
                 p+   r++ + +++  + ++ +++  ++ ++ l+ee+++aY + r+++ 
  EPX71138.1  75 PDVYARQFSELVQKDNQYVHGKFKVMEEFQQTLAEEITSAYPKLRNQVD 123
                 5556677788888888899999999999999999999999999888775 PP

>> CbeA_antitoxin  CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00011      0.27       7      63 ..      75     129 ..      70     134 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00011
  CbeA_antitoxin   7 rdvtPrfgarlvqeGnrlhyladraglvGefseeeaqkldeafPllikqlellllsg 63 
                      dv  r  + lvq+ n+  y++ +  ++ ef+++ a+++  a+P+l +q++++l  g
      EPX71138.1  75 PDVYARQFSELVQKDNQ--YVHGKFKVMEEFQQTLAEEITSAYPKLRNQVDEILGQG 129
                     56667777789998885..9******************************9998665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       783  (0.0436723); expected 358.6 (0.02)
Passed bias filter:                      544  (0.0303419); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1022.76
//
Query:       EPX71139.1  [L=574]
Description: zf-MYND type zinc finger protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      7e-07   29.2  19.7    1.6e-06   28.1  19.7    1.6  1  zf-MYND   MYND finger


Domain annotation for each model (and alignments):
>> zf-MYND  MYND finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.1  19.7   8.7e-11   1.6e-06       3      38 .]     474     513 ..     456     513 .. 0.83

  Alignments for each domain:
  == domain 1  score: 28.1 bits;  conditional E-value: 8.7e-11
                 TT--.....B-SC...E-TTTS-SEESSHHHHHHCHHHHCCCH CS
     zf-MYND   3 vCgk....aealk...kCagCksvfYCskeCqradwksHkteC 38 
                 +C k    +   +   kC +C++++YCskeCq+ +w+ H ++C
  EPX71139.1 474 QCTKweehS---RqfaKCRRCRRTKYCSKECQQLAWPGHSRWC 513
                 477775322...2467*************************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (574 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       644  (0.0359195); expected 358.6 (0.02)
Passed bias filter:                      284  (0.0158403); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 4433.88
//
Query:       EPX71140.1  [L=675]
Description: complexed with Cdc5 protein Cwf4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.4e-25   87.0  69.1    3.5e-17   62.0   6.9   12.6 13  HAT          HAT (Half-A-TPR) repeat
    7.3e-25   85.5  15.9     0.0025   18.5   0.1   10.9 12  TPR_14       Tetratricopeptide repeat
    9.7e-19   67.7   0.6    9.2e-07   29.3   0.0    7.1  7  TPR_19       Tetratricopeptide repeat
    1.9e-15   57.6  31.1    0.00021   21.4   1.9    8.1  8  Suf          Suppressor of forked protein (Suf)
    4.6e-12   45.1  14.9      0.004   17.2   0.0    9.4  9  TPR_2        Tetratricopeptide repeat
    4.9e-11   42.2   2.8      0.017   15.5   0.1    6.1  5  TPR_17       Tetratricopeptide repeat
    6.4e-11   41.6   3.8       0.68   10.3   0.0    8.0  7  TPR_8        Tetratricopeptide repeat
    1.8e-10   40.8   9.6        1.8    9.3   0.1    8.2  7  TPR_6        Tetratricopeptide repeat
      5e-10   39.9   7.5     0.0029   18.2   0.0    7.1  6  TPR_16       Tetratricopeptide repeat
    3.5e-07   30.4   8.3        0.7   10.2   0.0    6.9  6  TPR_12       Tetratricopeptide repeat
    1.4e-06   27.7  10.1        0.5    9.5   0.6    5.6  5  TPR_15       Tetratricopeptide repeat
    0.00012   21.3  18.8       0.16   11.1   1.1    5.5  5  NRDE-2       NRDE-2, necessary for RNA interference
    0.00037   20.3   9.9        6.1    7.1   0.0    6.8  5  TPR_7        Tetratricopeptide repeat
     0.0019   17.9   4.3       0.94    9.4   0.1    6.2  8  TPR_1        Tetratricopeptide repeat
     0.0086   16.1   3.4         21    5.3   0.1    4.3  3  Fis1_TPR_C   Fis1 C-terminal tetratricopeptide repeat
  ------ inclusion threshold ------
      0.014   15.4  30.0       0.12   12.4   3.7    6.4  5  Mad3_BUB1_I  Mad3/BUB1 homology region 1
      0.017   15.2   8.3        7.4    6.8   0.0    5.9  7  TPR_9        Tetratricopeptide repeat
      0.033   13.9   0.6        2.4    7.9   0.0    4.4  6  TPR_11       TPR repeat
       0.73    9.9   0.0       0.73    9.9   0.0    6.4  7  U3_assoc_6   U3 small nucleolar RNA-associated protein 6


Domain annotation for each model (and alignments):
>> HAT  HAT (Half-A-TPR) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   0.1   0.00016      0.15       1      26 [.      84     110 ..      84     114 .. 0.85
   2 ?    0.8   0.3      0.51   4.8e+02       3      31 ..     120     149 ..     118     150 .. 0.82
   3 ?    4.7   0.2     0.032        30       6      30 ..     157     181 ..     153     183 .. 0.90
   4 !   62.0   6.9   3.7e-20   3.5e-17       1      32 []     185     216 ..     185     216 .. 0.98
   5 ?   -1.2   0.9       2.1     2e+03      24      30 ..     245     251 ..     242     253 .. 0.85
   6 ?    3.1   0.2     0.099        94       1      10 [.     255     264 ..     255     266 .. 0.90
   7 ?   -1.3   0.2       2.3   2.2e+03       4      11 ..     336     343 ..     334     347 .. 0.86
   8 ?   -0.7   0.1       1.5   1.4e+03      23      31 ..     365     373 ..     362     374 .. 0.93
   9 !    6.4   0.9    0.0093       8.7       2      30 ..     378     411 ..     377     413 .. 0.69
  10 !    6.5   0.0    0.0085         8       2      30 ..     449     478 ..     448     480 .. 0.84
  11 ?    1.1   0.0      0.42     4e+02       3      11 ..     484     492 ..     483     495 .. 0.87
  12 !   28.9   0.1   8.4e-10     8e-07       2      30 ..     519     547 ..     518     548 .. 0.97
  13 ?   -2.7   0.1       6.5   6.2e+03       5      11 ..     571     577 ..     570     577 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00016
                 --HHHHHHHHHHHHHHS--.HHHHHHH CS
         HAT   1 kEidRAReiYeRFvvVHpe.VkNWiky 26 
                 kE  RAR+++eR + V p  +  W+ky
  EPX71140.1  84 KEYARARSVFERAIDVDPKyIPLWLKY 110
                 8999************96537889998 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.51
                 HHHHHHHHHHHHHHS--H.HHHHHHHHHHH CS
         HAT   3 idRAReiYeRFvvVHpeV.kNWikyArFEE 31 
                 i+ AR+ ++R +   p V k W ky   EE
  EPX71140.1 120 INHARNLFDRAITFLPRVdKLWYKYVYMEE 149
                 889*******99999999446999988887 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.032
                 HHHHHHHHHHHS--HHHHHHHHHHH CS
         HAT   6 AReiYeRFvvVHpeVkNWikyArFE 30 
                  R+i+eR++   p+   W+ y r E
  EPX71140.1 157 CRQIFERWLKWQPDEVAWMSYIRLE 181
                 59************99*****9998 PP

  == domain 4  score: 62.0 bits;  conditional E-value: 3.7e-20
                 --HHHHHHHHHHHHHHS--HHHHHHHHHHHHH CS
         HAT   1 kEidRAReiYeRFvvVHpeVkNWikyArFEEe 32 
                 +E++RAR+i+eRFv VHp+V NW+++ArFEEe
  EPX71140.1 185 HENERARGIFERFVIVHPDVVNWLRWARFEEE 216
                 9******************************7 PP

  == domain 5  score: -1.2 bits;  conditional E-value: 2.1
                 HHHHHHH CS
         HAT  24 ikyArFE 30 
                 i +A+FE
  EPX71140.1 245 IAFAKFE 251
                 88****9 PP

  == domain 6  score: 3.1 bits;  conditional E-value: 0.099
                 --HHHHHHHH CS
         HAT   1 kEidRAReiY 10 
                 kE +RAR i+
  EPX71140.1 255 KEYERARTIF 264
                 8*******97 PP

  == domain 7  score: -1.3 bits;  conditional E-value: 2.3
                 HHHHHHHH CS
         HAT   4 dRAReiYe 11 
                 +R Re Ye
  EPX71140.1 336 ERIREMYE 343
                 8******9 PP

  == domain 8  score: -0.7 bits;  conditional E-value: 1.5
                 HHHHHHHHH CS
         HAT  23 WikyArFEE 31 
                 W+ y  FEE
  EPX71140.1 365 WLNYVLFEE 373
                 ********9 PP

  == domain 9  score: 6.4 bits;  conditional E-value: 0.0093
                 -HHHHHHHHHHHHHH..S--...HHHHHHHHHHH CS
         HAT   2 EidRAReiYeRFvvV..Hpe...VkNWikyArFE 30 
                 E +RAR++Y   +    H      k Wi yA FE
  EPX71140.1 378 EAERARNVYLQCLKLipHKSftfAKVWIMYAMFE 411
                 899******8887652243223357799999988 PP

  == domain 10  score: 6.5 bits;  conditional E-value: 0.0085
                 -HHHHHHHHHHHHHHS--H.HHHHHHHHHH CS
         HAT   2 EidRAReiYeRFvvVHpeV.kNWikyArFE 30 
                   dR R  Ye+++v  pe    W+ yA  E
  EPX71140.1 449 QFDRCRILYEKWIVYDPEAcAPWLGYANLE 478
                 67************99985268****9988 PP

  == domain 11  score: 1.1 bits;  conditional E-value: 0.42
                 HHHHHHHHH CS
         HAT   3 idRAReiYe 11 
                  dRAR ++e
  EPX71140.1 484 TDRARAVFE 492
                 59*****98 PP

  == domain 12  score: 28.9 bits;  conditional E-value: 8.4e-10
                 -HHHHHHHHHHHHHHS--HHHHHHHHHHH CS
         HAT   2 EidRAReiYeRFvvVHpeVkNWikyArFE 30 
                 E +RAR+ Y+R +   p Vk Wi +A FE
  EPX71140.1 519 EYERARSLYQRLLETAPHVKVWISFANFE 547
                 89**************************9 PP

  == domain 13  score: -2.7 bits;  conditional E-value: 6.5
                 HHHHHHH CS
         HAT   5 RAReiYe 11 
                 RAR ++e
  EPX71140.1 571 RARKVFE 577
                 9****97 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1       6.4   6.1e+03      20      30 ..      20      30 ..      18      32 .. 0.85
   2 !   18.5   0.1   2.6e-06    0.0025       4      43 ..      73     112 ..      71     113 .. 0.95
   3 ?    6.9   0.0     0.014        13       3      42 ..     106     145 ..     106     147 .. 0.93
   4 !    7.6   0.0    0.0085         8       2      43 ..     139     179 ..     138     180 .. 0.85
   5 !    7.9   0.0    0.0064       6.1       3      43 ..     173     212 ..     171     213 .. 0.93
   6 ?    0.8   0.0       1.3   1.2e+03       8      25 ..     248     265 ..     243     284 .. 0.81
   7 !   18.4   0.0   2.9e-06    0.0028       3      42 ..     321     362 ..     320     364 .. 0.86
   8 ?   -1.4   0.0       6.7   6.3e+03      13      30 ..     375     392 ..     365     396 .. 0.76
   9 !   13.0   0.0   0.00016      0.15       2      36 ..     402     436 ..     401     443 .. 0.90
  10 ?   -1.9   0.0       9.6   9.1e+03       9      29 ..     442     462 ..     434     466 .. 0.66
  11 !   12.7   0.1    0.0002      0.19       4      41 ..     471     510 ..     469     513 .. 0.82
  12 !    9.6   0.1     0.002       1.9       3      33 ..     506     536 ..     503     544 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 6.4
      TPR_14 20 Aiallrralal 30
                A++llr+a+++
  EPX71140.1 20 AEQLLREAVER 30
                99******986 PP

  == domain 2  score: 18.5 bits;  conditional E-value: 2.6e-06
      TPR_14   4 llalaeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 ++++++ +l++ ++++A+ +++ra++ +P+   +wl + +
  EPX71140.1  73 WMRYGQWELEQKEYARARSVFERAIDVDPKYIPLWLKYIE 112
                 899*********************************9986 PP

  == domain 3  score: 6.9 bits;  conditional E-value: 0.014
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddaeawllla 42 
                 ++l++ e ++  ++   A++l++ra+   P  + +w+ ++
  EPX71140.1 106 LWLKYIECEMKTRNINHARNLFDRAITFLPRVDKLWYKYV 145
                 699999999***************************9886 PP

  == domain 4  score: 7.6 bits;  conditional E-value: 0.0085
      TPR_14   2 eallalaeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 +++++++  ++ l++  + +++++r+l+ +Pd ++aw+ + +
  EPX71140.1 139 KLWYKYVYMEEMLENITGCRQIFERWLKWQPD-EVAWMSYIR 179
                 58*************************94444.788887766 PP

  == domain 5  score: 7.9 bits;  conditional E-value: 0.0064
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 a++ + +++++  + ++A+ +++r +  +Pd  + wl++a+
  EPX71140.1 173 AWMSYIRLERRYHENERARGIFERFVIVHPD-VVNWLRWAR 212
                 8999*********************99***9.899999997 PP

  == domain 6  score: 0.8 bits;  conditional E-value: 1.3
      TPR_14   8 aeallalGdpdeAiallr 25 
                 a+++ ++ ++++A+++++
  EPX71140.1 248 AKFEIRQKEYERARTIFK 265
                 88999*********9987 PP

  == domain 7  score: 18.4 bits;  conditional E-value: 2.9e-06
      TPR_14   3 allalaeallalGdpdeAiallrralalaPdd..aeawllla 42 
                 ++l+l ++++  Gd+++ ++++++a+a+ P++   +aw ++ 
  EPX71140.1 321 VWLDLIKLEEKTGDFERIREMYEQAIAKVPESkeKRAWSRYI 362
                 7*****************************772246887765 PP

  == domain 8  score: -1.4 bits;  conditional E-value: 6.7
      TPR_14  13 alGdpdeAiallrralal 30 
                  + + ++A++++ ++l+l
  EPX71140.1 375 DASEAERARNVYLQCLKL 392
                 467889999999999986 PP

  == domain 9  score: 13.0 bits;  conditional E-value: 0.00016
      TPR_14   2 eallalaeallalGdpdeAiallrralalaPddae 36 
                 +++ ++a ++l++++ d+A++ l ral  +P++  
  EPX71140.1 402 KVWIMYAMFELRQQNIDAARKTLGRALGMCPKPKL 436
                 5799***********************99998755 PP

  == domain 10  score: -1.9 bits;  conditional E-value: 9.6
      TPR_14   9 eallalGdpdeAiallrrala 29 
                 e++    ++d+ + l+++++ 
  EPX71140.1 442 EYEDSIKQFDRCRILYEKWIV 462
                 555555688888888888875 PP

  == domain 11  score: 12.7 bits;  conditional E-value: 0.0002
      TPR_14   4 llalaeallalGdpdeAiallrralal..aPddaeawlll 41 
                 +l +a ++  lGd+d+A+a+++ a+a+    +++ +w ++
  EPX71140.1 471 WLGYANLENKLGDTDRARAVFELAVAQpvLETPELVWKAY 510
                 999*********************9963345677777776 PP

  == domain 12  score: 9.6 bits;  conditional E-value: 0.002
      TPR_14   3 allalaeallalGdpdeAiallrralalaPd 33 
                 +++a+ +++++  ++++A+ l++r+l++aP 
  EPX71140.1 506 VWKAYIDFEFEEMEYERARSLYQRLLETAPH 536
                 5999**************************7 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.3   0.0   9.7e-10   9.2e-07       2      51 ..      81     130 ..      80     141 .. 0.95
   2 ?    1.6   0.0      0.42     4e+02      10      60 ..     123     172 ..     123     177 .. 0.89
   3 ?    2.1   0.0      0.31   2.9e+02      32      49 ..     248     265 ..     222     280 .. 0.71
   4 !    8.6   0.0    0.0028       2.6      14      52 ..     308     346 ..     306     367 .. 0.84
   5 !    9.8   0.0    0.0011       1.1       4      52 ..     376     428 ..     373     438 .. 0.87
   6 ?    5.7   0.0     0.023        21      25      50 ..     468     493 ..     456     501 .. 0.83
   7 ?    1.9   0.0      0.33   3.2e+02       5      23 ..     518     536 ..     509     549 .. 0.79

  Alignments for each domain:
  == domain 1  score: 29.3 bits;  conditional E-value: 9.7e-10
      TPR_19   2 laegdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdal 51 
                 l+++ ya+A + +e+a++ dpk+  ++l ++e+ +++ +++ A++l d++
  EPX71140.1  81 LEQKEYARARSVFERAIDVDPKYIPLWLKYIECEMKTRNINHARNLFDRA 130
                 89*********************************************997 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.42
      TPR_19  10 AlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpddar 60 
                 A +l+ +a++  p  + +++ ++     l +++  +++ ++ ++++pd + 
  EPX71140.1 123 ARNLFDRAITFLPRVDKLWYKYVYMEEMLENITGCRQIFERWLKWQPD-EV 172
                 7789999999999999999999999999*******************9.43 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.31
      TPR_19  32 AeallalgqldeAealLd 49 
                 A+  + +++++ A+ + +
  EPX71140.1 248 AKFEIRQKEYERARTIFK 265
                 555555666666655544 PP

  == domain 4  score: 8.6 bits;  conditional E-value: 0.0028
      TPR_19  14 leqalqedpknaearllLAeallalgqldeAealLdalp 52 
                 +e+ l+e+p + +++l+L+++  ++g+++  +++ +++ 
  EPX71140.1 308 YENELKENPYDYDVWLDLIKLEEKTGDFERIREMYEQAI 346
                 788899*********************997666666655 PP

  == domain 5  score: 9.8 bits;  conditional E-value: 0.0011
      TPR_19   4 egdyaeAlalleqalqedpk....naearllLAeallalgqldeAealLdalp 52 
                 +   ++A + + q l+  p+     a +++ +A   l + ++d+A+++L +++
  EPX71140.1 376 ASEAERARNVYLQCLKLIPHksftFAKVWIMYAMFELRQQNIDAARKTLGRAL 428
                 55677889999999999999999999***********************9876 PP

  == domain 6  score: 5.7 bits;  conditional E-value: 0.023
      TPR_19  25 aearllLAeallalgqldeAealLda 50 
                  + +l++A++  +lg++d A+a+ + 
  EPX71140.1 468 CAPWLGYANLENKLGDTDRARAVFEL 493
                 56789*****************9875 PP

  == domain 7  score: 1.9 bits;  conditional E-value: 0.33
      TPR_19   5 gdyaeAlalleqalqedpk 23 
                   y++A +l++++l+ +p+
  EPX71140.1 518 MEYERARSLYQRLLETAPH 536
                 5688999999999988886 PP

>> Suf  Suppressor of forked protein (Suf)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.8   1.1e-05      0.01      20     135 ..      55     186 ..      51     186 .. 0.91
   2 !    9.2   0.0    0.0011       1.1      56     128 ..     158     225 ..     147     229 .. 0.83
   3 !   21.4   1.9   2.2e-07   0.00021      70     133 ..     241     305 ..     237     318 .. 0.88
   4 ?    2.9   0.5     0.094        89     108     168 ..     320     379 ..     305     392 .. 0.69
   5 ?    3.5   0.1     0.065        61       3      27 ..     403     427 ..     400     430 .. 0.92
   6 !   19.2   0.0   1.1e-06     0.001      82     139 ..     480     536 ..     472     551 .. 0.91
   7 ?    3.9   0.3     0.046        43      88     141 ..     571     627 ..     567     633 .. 0.80
   8 ?    1.2   0.0      0.32   3.1e+02      75     102 ..     636     666 ..     628     673 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 1.1e-05
         Suf  20 aRkvFkkARkkprltyevyvasAllEyyiskdkkvAtkIFelGlKkFpedeefvlkYldyLislnddnnaRvlfekvvsklskeke............. 105
                  Rk F++A  ++rl    ++  ++ E   +k+ + A+ +Fe+++   p+ +   lkY++  ++  + n aR lf+++++ l   ++             
  EPX71140.1  55 KRKGFEDAIRRNRLAMGHWMRYGQWELE-QKEYARARSVFERAIDVDPKYIPLWLKYIECEMKTRNINHARNLFDRAITFLPRVDKlwykyvymeemle 152
                 6899999999999999999999999999.999999*********99999999999999999********************999999999999999999 PP

         Suf 106 ....akelykkfleyestfgdlssilklekRmee 135
                      +++++++l+++       s + le+R++e
  EPX71140.1 153 nitgCRQIFERWLKWQPDEVAWMSYIRLERRYHE 186
                 9999999999999999999988888999999875 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.0011
         Suf  56 tkIFelGlKkFpedeefvlkYldyLislnddnnaRvlfekvvsklskekeakelykkfleyestfgdlssilk 128
                 ++IFe+ lK  p++ ++ + Y+    +  ++++aR +fe+ v    +       + +++++e + g+++++  
  EPX71140.1 158 RQIFERWLKWQPDEVAW-MSYIRLERRYHENERARGIFERFVIVHPDVV----NWLRWARFEEECGNVANVRA 225
                 68999999988877776.68**999999***********9987655555....49***********9999865 PP

  == domain 3  score: 21.4 bits;  conditional E-value: 2.2e-07
         Suf  70 eefvlkYldyLislnddnnaRvlfekvvsklskekeakelykkfleyestfgdlssilk..lekRm 133
                 e+f +++ ++ i+  + ++aR++f  ++  +   k + elyk + ++e+++g+ s i +  ++kR+
  EPX71140.1 241 EKFFIAFAKFEIRQKEYERARTIFKYAIDFMPRSK-SAELYKEYTHFEKQYGEQSGIESivFDKRR 305
                 78999******************************.*****************9999873345555 PP

  == domain 4  score: 2.9 bits;  conditional E-value: 0.094
         Suf 108 elykkfleyestfgdlssilklekRmeelfpedskleqfvdRYklknldpikkrelksetk 168
                 +++   ++ e + gd + i ++ ++  + +pe  k +++ +RY +  l+ +  +e++  ++
  EPX71140.1 320 DVWLDLIKLEEKTGDFERIREMYEQAIAKVPES-KEKRAWSRYIYIWLNYVLFEEIDASEA 379
                 677777788888888888877777777777754.446777788777777777777766655 PP

  == domain 5  score: 3.5 bits;  conditional E-value: 0.065
         Suf   3 vwikymrasrRaeGikgaRkvFkkA 27 
                 vwi+y ++  R + i +aRk   +A
  EPX71140.1 403 VWIMYAMFELRQQNIDAARKTLGRA 427
                 9******************987776 PP

  == domain 6  score: 19.2 bits;  conditional E-value: 1.1e-06
         Suf  82 slnddnnaRvlfekvvsklskekeakelykkfleyestfgdlssilklekRmeelfpe 139
                 +l d+++aR++fe +v+++  e+  + ++k ++++e +  + +   +l +R+ e+ p 
  EPX71140.1 480 KLGDTDRARAVFELAVAQPVLET-PELVWKAYIDFEFEEMEYERARSLYQRLLETAPH 536
                 67899*****************9.9**************************9999876 PP

  == domain 7  score: 3.9 bits;  conditional E-value: 0.046
         Suf  88 naRvlfekvvsklskeke...akelykkfleyestfgdlssilklekRmeelfpeds 141
                 +aR +fe ++++l ++        l + + ++es +g  +    +ek+  +++ +  
  EPX71140.1 571 RARKVFEAAMTSLRQQGLkeeRVVLLEAWKQFESMHGTEETRERVEKQTPQMVTKRR 627
                 7999********99876222255699***********99999999999888877655 PP

  == domain 8  score: 1.2 bits;  conditional E-value: 0.32
         Suf  75 kYldyL...islnddnnaRvlfekvvsklsk 102
                 +YldyL   +s++  +++R l+ek+ ++  +
  EPX71140.1 636 EYLDYLfpdTSVDQGDKMRMLLEKSRQWKEQ 666
                 8*****66669*************9887544 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   4.2e-06     0.004       4      34 .]      73     103 ..      73     103 .. 0.95
   2 ?    3.4   0.0      0.11     1e+02      10      32 ..     113     135 ..     112     136 .. 0.85
   3 ?    5.6   0.0     0.022        21      12      33 ..     252     273 ..     248     274 .. 0.89
   4 ?   -0.2   0.0       1.5   1.4e+03      14      33 ..     332     351 ..     328     352 .. 0.75
   5 ?    2.6   0.0      0.19   1.8e+02      18      33 ..     380     395 ..     377     396 .. 0.91
   6 !    6.9   0.0    0.0082       7.7       1      32 [.     401     432 ..     401     434 .. 0.91
   7 ?   -0.4   0.0       1.8   1.7e+03      17      32 ..     443     458 ..     442     466 .. 0.71
   8 ?    3.1   0.1      0.13   1.2e+02      13      29 ..     480     496 ..     471     497 .. 0.88
   9 ?    6.0   0.1     0.015        15      16      33 ..     519     536 ..     519     537 .. 0.92

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 4.2e-06
       TPR_2   4 lynlGlayyklgdyeeAleafekAleldPnn 34 
                 +++ G+  +++++y++A+  fe+A+  dP++
  EPX71140.1  73 WMRYGQWELEQKEYARARSVFERAIDVDPKY 103
                 8899*************************85 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.11
       TPR_2  10 ayyklgdyeeAleafekAleldP 32 
                 + +k  + + A+++f++A+   P
  EPX71140.1 113 CEMKTRNINHARNLFDRAITFLP 135
                 568999************97665 PP

  == domain 3  score: 5.6 bits;  conditional E-value: 0.022
       TPR_2  12 yklgdyeeAleafekAleldPn 33 
                 +++++ye+A+  f+ A+   P+
  EPX71140.1 252 IRQKEYERARTIFKYAIDFMPR 273
                 689**************98885 PP

  == domain 4  score: -0.2 bits;  conditional E-value: 1.5
       TPR_2  14 lgdyeeAleafekAleldPn 33 
                  gd+e+ +e +e+A++  P+
  EPX71140.1 332 TGDFERIREMYEQAIAKVPE 351
                 56666667889999998886 PP

  == domain 5  score: 2.6 bits;  conditional E-value: 0.19
       TPR_2  18 eeAleafekAleldPn 33 
                 e+A++ + ++l+l P+
  EPX71140.1 380 ERARNVYLQCLKLIPH 395
                 79***********996 PP

  == domain 6  score: 6.9 bits;  conditional E-value: 0.0082
       TPR_2   1 aealynlGlayyklgdyeeAleafekAleldP 32 
                 a+++ + ++  +++++ + A++ + +Al  +P
  EPX71140.1 401 AKVWIMYAMFELRQQNIDAARKTLGRALGMCP 432
                 789************************97777 PP

  == domain 7  score: -0.4 bits;  conditional E-value: 1.8
       TPR_2  17 yeeAleafekAleldP 32 
                 ye+ ++ f+++  l++
  EPX71140.1 443 YEDSIKQFDRCRILYE 458
                 7777777777766654 PP

  == domain 8  score: 3.1 bits;  conditional E-value: 0.13
       TPR_2  13 klgdyeeAleafekAle 29 
                 klgd ++A++ fe A++
  EPX71140.1 480 KLGDTDRARAVFELAVA 496
                 79***********9975 PP

  == domain 9  score: 6.0 bits;  conditional E-value: 0.015
       TPR_2  16 dyeeAleafekAleldPn 33 
                 +ye+A+ ++++ le +P+
  EPX71140.1 519 EYERARSLYQRLLETAPH 536
                 69************9996 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.025        23       2      22 ..      93     113 ..      92     132 .. 0.85
   2 !   10.5   0.0   0.00071      0.67       1      34 []     307     340 ..     307     340 .. 0.94
   3 ?   -2.0   0.0       6.7   6.3e+03       1      12 [.     341     352 ..     341     366 .. 0.80
   4 ?    5.2   0.0     0.035        33       2      34 .]     386     422 ..     385     422 .. 0.76
   5 !   15.5   0.1   1.8e-05     0.017       1      34 []     456     489 ..     456     489 .. 0.97

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.025
      TPR_17   2 ylkaleldPnnadaynnLAel 22 
                 +++a++ dP++ +++  + e+
  EPX71140.1  93 FERAIDVDPKYIPLWLKYIEC 113
                 89*************988655 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00071
      TPR_17   1 lylkaleldPnnadaynnLAelllknGdlmtArq 34 
                 +y++ l+ +P + d++  L +l +k Gd+++ r+
  EPX71140.1 307 AYENELKENPYDYDVWLDLIKLEEKTGDFERIRE 340
                 5999*************************99875 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 6.7
      TPR_17   1 lylkaleldPnn 12 
                 +y++a+++ P +
  EPX71140.1 341 MYEQAIAKVPES 352
                 69****998876 PP

  == domain 4  score: 5.2 bits;  conditional E-value: 0.035
      TPR_17   2 ylkaleldPnn....adaynnLAelllknGdlmtArq 34 
                 yl++l+l P      a+++ ++A + l++ + + Ar+
  EPX71140.1 386 YLQCLKLIPHKsftfAKVWIMYAMFELRQQNIDAARK 422
                 666666633333366****************999985 PP

  == domain 5  score: 15.5 bits;  conditional E-value: 1.8e-05
      TPR_17   1 lylkaleldPnnadaynnLAelllknGdlmtArq 34 
                 ly+k + +dP    ++  +A+l  k+Gd+++Ar+
  EPX71140.1 456 LYEKWIVYDPEACAPWLGYANLENKLGDTDRARA 489
                 7*******************************95 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.0   0.00072      0.68       5      33 ..      74     102 ..      73     103 .. 0.84
   2 ?   -1.2   0.1       3.4   3.2e+03      12      28 ..     252     268 ..     245     270 .. 0.80
   3 ?    2.6   0.0      0.21     2e+02      12      28 ..     330     346 ..     320     347 .. 0.89
   4 ?    3.6   0.0       0.1        95      17      32 ..     379     394 ..     374     396 .. 0.89
   5 !    8.6   0.0    0.0026       2.4       1      33 [.     401     433 ..     401     434 .. 0.95
   6 !    7.5   0.0    0.0059       5.5       4      28 ..     471     495 ..     470     496 .. 0.88
   7 ?   -0.1   0.0       1.5   1.4e+03      17      32 ..     520     535 ..     519     536 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00072
                 HHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   5 ynlgsiylklgdyeeAkeyyekaleldpd 33 
                 ++ g+  l++++y  A +++e+a++ dp+
  EPX71140.1  74 MRYGQWELEQKEYARARSVFERAIDVDPK 102
                 55666667899*****************8 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 3.4
                 HHTT-HHHHHHHHHHHH CS
       TPR_8  12 lklgdyeeAkeyyekal 28 
                 + +++ye A   ++ a+
  EPX71140.1 252 IRQKEYERARTIFKYAI 268
                 57899****99998665 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.21
                 HHTT-HHHHHHHHHHHH CS
       TPR_8  12 lklgdyeeAkeyyekal 28 
                 +k+gd+e   e ye+a+
  EPX71140.1 330 EKTGDFERIREMYEQAI 346
                 789*************8 PP

  == domain 4  score: 3.6 bits;  conditional E-value: 0.1
                 HHHHHHHHHHHHHHHH CS
       TPR_8  17 yeeAkeyyekaleldp 32 
                  e A  +y ++l+l p
  EPX71140.1 379 AERARNVYLQCLKLIP 394
                 589**********988 PP

  == domain 5  score: 8.6 bits;  conditional E-value: 0.0026
                 CCHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   1 aeayynlgsiylklgdyeeAkeyyekaleldpd 33 
                 a+++ + ++  l ++++++A +++ +al + p+
  EPX71140.1 401 AKVWIMYAMFELRQQNIDAARKTLGRALGMCPK 433
                 789**************************9997 PP

  == domain 6  score: 7.5 bits;  conditional E-value: 0.0059
                 HHHHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_8   4 yynlgsiylklgdyeeAkeyyekal 28 
                 ++  +++  klgd + A +++e a+
  EPX71140.1 471 WLGYANLENKLGDTDRARAVFELAV 495
                 666788999*************997 PP

  == domain 7  score: -0.1 bits;  conditional E-value: 1.5
                 HHHHHHHHHHHHHHHH CS
       TPR_8  17 yeeAkeyyekaleldp 32 
                 ye A + y++ le +p
  EPX71140.1 520 YERARSLYQRLLETAP 535
                 99*********99887 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.1    0.0025       2.4       5      32 ..      75     102 ..      73     103 .. 0.89
   2 ?    2.0   0.0      0.42   3.9e+02      15      32 ..     186     203 ..     175     203 .. 0.78
   3 ?    1.3   0.1      0.69   6.6e+02      11      24 ..     252     265 ..     245     269 .. 0.79
   4 !    7.3   0.0     0.009       8.5       9      33 .]     328     352 ..     320     352 .. 0.86
   5 ?    2.8   0.0      0.23   2.2e+02       7      26 ..     406     427 ..     401     432 .. 0.72
   6 ?    5.9   0.0     0.024        23       7      26 ..     475     494 ..     471     497 .. 0.69
   7 !    9.3   0.1    0.0019       1.8      11      31 ..     516     535 ..     514     536 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.0025
                 HHHHHHHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6   5 klalsyrklgdtdkAlealerlikeYPd 32 
                 + ++  ++++++++A+  +er i+  P+
  EPX71140.1  75 RYGQWELEQKEYARARSVFERAIDVDPK 102
                 7899999*9**************98775 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.42
                 HHHHHHHHHHHHHHH-TT CS
       TPR_6  15 dtdkAlealerlikeYPd 32 
                 + ++A+ ++er++  +Pd
  EPX71140.1 186 ENERARGIFERFVIVHPD 203
                 5689********977776 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.69
                 HHHHHHHHHHHHHH CS
       TPR_6  11 rklgdtdkAleale 24 
                 ++++++++A+++++
  EPX71140.1 252 IRQKEYERARTIFK 265
                 4678********97 PP

  == domain 4  score: 7.3 bits;  conditional E-value: 0.009
                 HHHHHHHHHHHHHHHHHHHHH-TT- CS
       TPR_6   9 syrklgdtdkAlealerlikeYPdS 33 
                 + +k+gd ++ +e++e+ i + P+S
  EPX71140.1 328 LEEKTGDFERIREMYEQAIAKVPES 352
                 567789***************9998 PP

  == domain 5  score: 2.8 bits;  conditional E-value: 0.23
                 HHHHHHH..HHHHHHHHHHHHH CS
       TPR_6   7 alsyrkl..gdtdkAlealerl 26 
                  +++++l  ++ d+A+++l r 
  EPX71140.1 406 MYAMFELrqQNIDAARKTLGRA 427
                 4455543337********9986 PP

  == domain 6  score: 5.9 bits;  conditional E-value: 0.024
                 HHHHHHHHHHHHHHHHHHHH CS
       TPR_6   7 alsyrklgdtdkAlealerl 26 
                 a +  klgdtd+A++ +e  
  EPX71140.1 475 ANLENKLGDTDRARAVFELA 494
                 4444457**********965 PP

  == domain 7  score: 9.3 bits;  conditional E-value: 0.0019
                 HHHHHHHHHHHHHHHHHHH-T CS
       TPR_6  11 rklgdtdkAlealerlikeYP 31 
                 +++ ++++A+ +++rl++  P
  EPX71140.1 516 EEM-EYERARSLYQRLLETAP 535
                 468.9*************998 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0     3e-06    0.0029      20      66 ..      59     102 ..      56     104 .. 0.95
   2 ?   -0.5   0.0       2.2     2e+03       8      24 ..     252     268 ..     246     272 .. 0.74
   3 ?    4.6   0.0     0.056        53       2      35 ..     324     361 ..     323     382 .. 0.70
   4 ?    3.5   0.1      0.12   1.1e+02      10      63 ..     376     430 ..     372     433 .. 0.62
   5 ?    6.3   0.1     0.016        15      37      62 ..     471     496 ..     462     499 .. 0.85
   6 ?    3.9   0.0      0.09        85      13      31 ..     520     535 ..     510     540 .. 0.76

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 3e-06
      TPR_16  20 leaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalraapd 66 
                 +e a++r+    +a   ++ +g+  l+q+++a+A+ ++++a++ +p+
  EPX71140.1  59 FEDAIRRN---RLAMGHWMRYGQWELEQKEYARARSVFERAIDVDPK 102
                 899*****...*******************************99997 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 2.2
      TPR_16   8 lragdyddAaaaleaal 24 
                 +r+++y++A+  ++ a+
  EPX71140.1 252 IRQKEYERARTIFKYAI 268
                 57777888877776665 PP

  == domain 3  score: 4.6 bits;  conditional E-value: 0.056
      TPR_16   2 alaraalragdyddAaaaleaalkrdpssPd....aae 35 
                 +l ++  + gd+++ ++++e+a+++ p+s +     + 
  EPX71140.1 324 DLIKLEEKTGDFERIREMYEQAIAKVPESKEkrawSRY 361
                 566677788999999***********887765333333 PP

  == domain 4  score: 3.5 bits;  conditional E-value: 0.12
      TPR_16  10 agdyddAaaaleaalkrdpssPd....aaeAllllgdaalrqgrlaeAa.alyraalra 63 
                 a + ++A++++ + lk+    P      a  +  ++   lrq++ ++A+  l ra l+ 
  EPX71140.1 376 ASEAERARNVYLQCLKLI---PHksftFAKVWIMYAMFELRQQNIDAARkTLGRA-LGM 430
                 555666666666666666...4444466777777777778888888888555544.355 PP

  == domain 5  score: 6.3 bits;  conditional E-value: 0.016
      TPR_16  37 llllgdaalrqgrlaeAaalyraalr 62 
                 +l+++++  ++g+ ++A+a+++ a++
  EPX71140.1 471 WLGYANLENKLGDTDRARAVFELAVA 496
                 89999999999**********99975 PP

  == domain 6  score: 3.9 bits;  conditional E-value: 0.09
      TPR_16  13 yddAaaaleaalkrdpssP 31 
                 y++A+ +++++l+ +   P
  EPX71140.1 520 YERARSLYQRLLETA---P 535
                 777888888877766...4 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.0    0.0086       8.2      51      75 ..      76     100 ..      72     102 .. 0.79
   2 ?   -0.2   0.0       1.4   1.3e+03      10      27 ..     248     265 ..     244     274 .. 0.73
   3 ?    3.4   0.0     0.097        92      56      73 ..     330     347 ..     320     358 .. 0.73
   4 ?    4.8   0.0     0.037        35       3      30 ..     401     428 ..     399     433 .. 0.85
   5 !   10.2   0.0   0.00074       0.7      19      73 ..     443     496 ..     442     497 .. 0.91
   6 ?    2.4   0.1      0.21     2e+02      15      32 ..     516     533 ..     506     536 .. 0.68

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0086
      TPR_12  51 LgrlyralgryeeAlelleealaia 75 
                 +g++ +++++y+ A++ +e+a++++
  EPX71140.1  76 YGQWELEQKEYARARSVFERAIDVD 100
                 5788888888899999998888876 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 1.4
      TPR_12  10 aavlrrlgrydeAlelle 27 
                 a ++ r+++y+ A+++++
  EPX71140.1 248 AKFEIRQKEYERARTIFK 265
                 556678888888888876 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.097
      TPR_12  56 ralgryeeAlelleeala 73 
                 +++g++e  +e++e+a+a
  EPX71140.1 330 EKTGDFERIREMYEQAIA 347
                 456777777777777665 PP

  == domain 4  score: 4.8 bits;  conditional E-value: 0.037
      TPR_12   3 atalnnlaavlrrlgrydeAlellekal 30 
                 a+++  +a++++r+++ d A++ l +al
  EPX71140.1 401 AKVWIMYAMFELRQQNIDAARKTLGRAL 428
                 56676799****************9998 PP

  == domain 5  score: 10.2 bits;  conditional E-value: 0.00074
      TPR_12  19 ydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleeala 73 
                 y+++++ +++++ +++++   + p++++   +++ l  +lg+++ A++ +e a+a
  EPX71140.1 443 YEDSIKQFDRCRILYEKWI-VYDPEACAPWLGYANLENKLGDTDRARAVFELAVA 496
                 9999**************7.6889***********************99998865 PP

  == domain 6  score: 2.4 bits;  conditional E-value: 0.21
      TPR_12  15 rlgrydeAlellekalei 32 
                 +  +y+ A++l+++ le 
  EPX71140.1 516 EEMEYERARSLYQRLLET 533
                 555677777777777765 PP

>> TPR_15  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.1     0.024        23     148     178 ..      72     102 ..      60     111 .. 0.90
   2 ?    3.9   0.0     0.027        26     149     233 ..     107     190 ..     102     209 .. 0.69
   3 !    9.5   0.6   0.00053       0.5      95     184 ..     262     357 ..     246     369 .. 0.76
   4 ?    4.0   0.1     0.026        25     146     183 ..     401     438 ..     353     443 .. 0.69
   5 !    8.3   0.1    0.0013       1.2     116     178 ..     474     536 ..     466     541 .. 0.92

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.024
      TPR_15 148 fllaraelyrqegqtdaAlrdyreAlalapd 178
                  +++++++++++ + ++A  ++++A++++p+
  EPX71140.1  72 HWMRYGQWELEQKEYARARSVFERAIDVDPK 102
                 6***************************997 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.027
      TPR_15 149 llaraelyrqegqtdaAlrdyreAlalapdsselraallWlliDlgrraeLrellkawkaraesdasLwgplaaAlllLgrpkkA 233
                 +l ++e + ++ + + A +++ +A++  p  ++l  +++++   l++ +  r++ ++w  +++ d++ w  +     +  ++++A
  EPX71140.1 107 WLKYIECEMKTRNINHARNLFDRAITFLPRVDKLWYKYVYMEEMLENITGCRQIFERWL-KWQPDEVAWMSYIRLERRYHENERA 190
                 77777777777777777777777777777777777777777777777777777777777.4566666666666655555555555 PP

  == domain 3  score: 9.5 bits;  conditional E-value: 0.00053
      TPR_15  95 eaarlaekgwrrfrsprlLssalellerakdydriaellks...leeeeaaeqsaa...fllaraelyrqegqtdaAlrdyreAlalapdsselra 184
                    ++a++   r++s +l++++ +  ++ ++ + i++++     l  e++++++++   ++l +++l++++g+ ++  ++y++A+a+ p+s+e ra
  EPX71140.1 262 TIFKYAIDFMPRSKSAELYKEYTHFEKQYGEQSGIESIVFDkrrLAYENELKENPYdydVWLDLIKLEEKTGDFERIREMYEQAIAKVPESKEKRA 357
                 445677777889999999999999999999999999988552334456667765544449******************************998775 PP

  == domain 4  score: 4.0 bits;  conditional E-value: 0.026
      TPR_15 146 aafllaraelyrqegqtdaAlrdyreAlalapdsselr 183
                 a +++++a +++++ + daA + + +Al + p+ + +r
  EPX71140.1 401 AKVWIMYAMFELRQQNIDAARKTLGRALGMCPKPKLFR 438
                 789*************************9988865555 PP

  == domain 5  score: 8.3 bits;  conditional E-value: 0.0013
      TPR_15 116 alellerakdydriaellksleeeeaaeqsaafllaraelyrqegqtdaAlrdyreAlalapd 178
                 + +l ++++d dr +++++ + +++ +e  ++++ a++ ++ +e + ++A  +y++ l+ ap 
  EPX71140.1 474 YANLENKLGDTDRARAVFELAVAQPVLETPELVWKAYIDFEFEEMEYERARSLYQRLLETAPH 536
                 66788999************************************************9999885 PP

>> NRDE-2  NRDE-2, necessary for RNA interference
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.6    0.0011       1.1      75     136 ..      74     135 ..      56     232 .. 0.80
   2 ?   -2.9   0.0         3   2.8e+03      97     112 ..     272     287 ..     240     299 .. 0.51
   3 !   11.1   1.1   0.00017      0.16       5      53 ..     307     348 ..     303     461 .. 0.62
   4 !    6.1   0.0    0.0057       5.4     100     134 ..     502     533 ..     471     537 .. 0.73
   5 !    8.2   0.4    0.0012       1.2       5     130 ..     525     659 ..     521     673 .. 0.73

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0011
      NRDE-2  75 Lklgseiwdse...klakeWeellkenpnsvkLWreyldfrqsnfasfsvekvkelyekclrtls 136
                 ++ g+ + +++   + ++ +e+++ + p+++ LW +y++ +++   + ++++ ++l+ +++  l 
  EPX71140.1  74 MRYGQWELEQKeyaRARSVFERAIDVDPKYIPLWLKYIECEMK---TRNINHARNLFDRAITFLP 135
                 5555555444423245667888888888999999999988888...5667777777777776654 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 3
      NRDE-2  97 enpnsvkLWreyldfr 112
                   ++s +L++ey +f+
  EPX71140.1 272 PRSKSAELYKEYTHFE 287
                 3344455555555554 PP

  == domain 3  score: 11.1 bits;  conditional E-value: 0.00017
      NRDE-2   5 elnraveenPedidaWlelvefQdellsaeeeslskserkalaeiklsi 53 
                  ++++++enP d d Wl+l+++ ++  + e       + ++++e  ++ 
  EPX71140.1 307 AYENELKENPYDYDVWLDLIKLEEKTGDFE-------RIREMYEQAIAK 348
                 578899999999999999999999543211.......122233333333 PP

  == domain 4  score: 6.1 bits;  conditional E-value: 0.0057
      NRDE-2 100 nsvkLWreyldfrqsnfasfsvekvkelyekclrt 134
                 + + +W++y+df+    +++++e+ ++ly++ l+t
  EPX71140.1 502 TPELVWKAYIDFEF---EEMEYERARSLYQRLLET 533
                 45679*******75...5999**********9997 PP

  == domain 5  score: 8.2 bits;  conditional E-value: 0.0012
      NRDE-2   5 elnraveenPedidaWlelvefQdellsaeee....slskserkalaeiklsilekAleknksn..pdserLllelLklgseiwdseklakeWeellk. 96 
                 +l +++ e    ++ W+++++f  + l+ ++e    + ++s ++ +  +k  ++e A+ + +++  +++  +lle  k  +++  +e+++++ e+    
  EPX71140.1 525 SLYQRLLETAPHVKVWISFANFEIAHLEDDDEdppnDDTASPTAVIRARK--VFEAAMTSLRQQglKEERVVLLEAWKQFESMHGTEETRERVEKQTPq 621
                 5556666666679**********966655555688655555555566676..58888888877766788889999999999999999877777775554 PP

      NRDE-2  97 ....enpnsvkLWreyldfrqsnfasfsvekvkelyek 130
                         + +L +eyld+   + +  + +k++ l+ek
  EPX71140.1 622 mvtkRRRLENGLFEEYLDYLFPDTSVDQGDKMRMLLEK 659
                 44445568999********9999998888888877665 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.1     0.043        41      12      32 ..      83     101 ..      80     102 .. 0.89
   2 ?   -0.5   0.1       1.7   1.6e+03      11      28 ..     253     268 ..     252     282 .. 0.78
   3 !    7.1   0.0    0.0065       6.1      11      35 ..     331     353 ..     330     354 .. 0.85
   4 ?    2.3   0.0      0.23   2.2e+02      11      28 ..     480     495 ..     475     502 .. 0.85
   5 ?    5.2   0.0     0.026        25      14      29 ..     519     534 ..     517     558 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.043
       TPR_7  12 lGdyeeAielyeqsLaltkdp 32 
                 + +y++A +++e+  a++ dp
  EPX71140.1  83 QKEYARARSVFER--AIDVDP 101
                 569**********..999998 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 1.7
       TPR_7  11 rlGdyeeAielyeqsLal 28 
                 r+ +ye+A ++++   a+
  EPX71140.1 253 RQKEYERARTIFKY--AI 268
                 56799999999998..44 PP

  == domain 3  score: 7.1 bits;  conditional E-value: 0.0065
       TPR_7  11 rlGdyeeAielyeqsLaltkdpeda 35 
                 + Gd+e+  e yeq  a++k pe +
  EPX71140.1 331 KTGDFERIREMYEQ--AIAKVPESK 353
                 68************..999877765 PP

  == domain 4  score: 2.3 bits;  conditional E-value: 0.23
       TPR_7  11 rlGdyeeAielyeqsLal 28 
                 +lGd+++A  ++e   a+
  EPX71140.1 480 KLGDTDRARAVFEL--AV 495
                 59**********98..65 PP

  == domain 5  score: 5.2 bits;  conditional E-value: 0.026
       TPR_7  14 dyeeAielyeqsLalt 29 
                 +ye+A +ly+++L+++
  EPX71140.1 519 EYERARSLYQRLLETA 534
                 7**********88776 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.1   0.00099      0.94      13      34 .]      82     103 ..      80     103 .. 0.94
   2 ?   -0.6   0.0       1.5   1.4e+03      12      32 ..     115     135 ..     112     136 .. 0.79
   3 ?   -1.0   0.0         2   1.9e+03      13      29 ..     253     269 ..     252     273 .. 0.81
   4 ?   -1.7   0.0       3.3   3.1e+03      22      28 ..     340     346 ..     320     350 .. 0.71
   5 ?   -2.9   0.0       7.7   7.3e+03      20      33 ..     382     395 ..     380     395 .. 0.77
   6 ?   -0.4   0.0       1.3   1.2e+03      13      33 ..     413     433 ..     408     434 .. 0.88
   7 ?   -0.1   0.0         1   9.7e+02       8      27 ..     475     494 ..     475     496 .. 0.83
   8 ?    1.2   0.0      0.39   3.7e+02      15      33 ..     518     536 ..     515     537 .. 0.86

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00099
                 HTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1  13 klgkydeAleyyekALelnPnn 34 
                 ++++y  A   +e+A+ ++P++
  EPX71140.1  82 EQKEYARARSVFERAIDVDPKY 103
                 79******************97 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 1.5
                 HHTT-HHHHHHHHHHHHHHST CS
       TPR_1  12 fklgkydeAleyyekALelnP 32 
                 +k  + + A   +++A++  P
  EPX71140.1 115 MKTRNINHARNLFDRAITFLP 135
                 677888999999999998765 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 2
                 HTT-HHHHHHHHHHHHH CS
       TPR_1  13 klgkydeAleyyekALe 29 
                 ++++y+ A   ++ A+ 
  EPX71140.1 253 RQKEYERARTIFKYAID 269
                 589*****998888876 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 3.3
                 HHHHHHH CS
       TPR_1  22 eyyekAL 28 
                 e ye+A+
  EPX71140.1 340 EMYEQAI 346
                 4455554 PP

  == domain 5  score: -2.9 bits;  conditional E-value: 7.7
                 HHHHHHHHHHHSTT CS
       TPR_1  20 AleyyekALelnPn 33 
                 A   y ++L+l P+
  EPX71140.1 382 ARNVYLQCLKLIPH 395
                 66679999*99885 PP

  == domain 6  score: -0.4 bits;  conditional E-value: 1.3
                 HTT-HHHHHHHHHHHHHHSTT CS
       TPR_1  13 klgkydeAleyyekALelnPn 33 
                 ++++ d A +   +AL  +P+
  EPX71140.1 413 RQQNIDAARKTLGRALGMCPK 433
                 7999************98886 PP

  == domain 7  score: -0.1 bits;  conditional E-value: 1
                 HHHHHHTT-HHHHHHHHHHH CS
       TPR_1   8 GnayfklgkydeAleyyekA 27 
                 +n+  klg+ d A + +e A
  EPX71140.1 475 ANLENKLGDTDRARAVFELA 494
                 577789*******9998877 PP

  == domain 8  score: 1.2 bits;  conditional E-value: 0.39
                 T-HHHHHHHHHHHHHHSTT CS
       TPR_1  15 gkydeAleyyekALelnPn 33 
                  +y+ A   y++ Le  P+
  EPX71140.1 518 MEYERARSLYQRLLETAPH 536
                 68**********9999886 PP

>> Fis1_TPR_C  Fis1 C-terminal tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.1     0.094        89      14      33 ..      83     102 ..      80     103 .. 0.91
   2 ?    5.0   0.1     0.028        26       5      37 ..     243     277 ..     242     285 .. 0.74
   3 ?    5.3   0.1     0.022        21      16      33 ..     519     536 ..     518     538 .. 0.92

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.094
                 HT-HHHHHHHHHHHHHHTTS CS
  Fis1_TPR_C  14 lgeYseArryvdalLeiEPe 33 
                 ++eY +Ar   ++ + ++P+
  EPX71140.1  83 QKEYARARSVFERAIDVDPK 102
                 69****************96 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.028
                 HHHHHHH..HHHT-HHHHHHHHHHHHHHTTS-HHH CS
  Fis1_TPR_C   5 YylAlGh..yklgeYseArryvdalLeiEPenrQa 37 
                 +++A+++  ++++eY++Ar   +  +   P+ + a
  EPX71140.1 243 FFIAFAKfeIRQKEYERARTIFKYAIDFMPRSKSA 277
                 566777522599*******9998888777777666 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.022
                 -HHHHHHHHHHHHHHTTS CS
  Fis1_TPR_C  16 eYseArryvdalLeiEPe 33 
                 eY++Ar + ++lLe  P 
  EPX71140.1 519 EYERARSLYQRLLETAPH 536
                 8*************9996 PP

>> Mad3_BUB1_I  Mad3/BUB1 homology region 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   1.1    0.0029       2.7      60     120 ..      97     161 ..      55     165 .. 0.71
   2 ?   -0.4   0.1       1.2   1.1e+03     100     122 ..     207     229 ..     149     231 .. 0.73
   3 ?    5.3   1.4      0.02        19      96     124 .]     240     268 ..     173     268 .. 0.87
   4 ?   12.4   3.7   0.00012      0.12       2     121 ..     304     425 ..     303     428 .. 0.79
   5 ?    4.4   0.1     0.038        36      63     122 ..     464     529 ..     443     531 .. 0.87

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0029
                  GTT-HHHHHHHHHHHTTSS-HHHH..HHHHHHHTTST..TBHHHHHHHHHHHHHTT-HHHHHHHH CS
  Mad3_BUB1_I  60 YknDpRylklwlkyadlveeprei..fkflaskkiGt..klalfYeewAellekkgrfkeAeevy 120
                     Dp+y+ lwlky+++  + r+i   + l+++ i    ++ +++ ++  + e  ++++ +++++
   EPX71140.1  97 IDVDPKYIPLWLKYIECEMKTRNInhARNLFDRAITFlpRVDKLWYKYVYMEEMLENITGCRQIF 161
                  567*************8755444410445666665432255666666666666666666666665 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 1.2
                  HHHHHHHHHHTT-HHHHHHHHHH CS
  Mad3_BUB1_I 100 YeewAellekkgrfkeAeevyel 122
                  + +wA++ e++g++++ ++vy  
   EPX71140.1 207 WLRWARFEEECGNVANVRAVYMA 229
                  66788888888888888888865 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.02
                  BHHHHHHHHHHHHHTT-HHHHHHHHHHH. CS
  Mad3_BUB1_I  96 lalfYeewAellekkgrfkeAeevyelGi 124
                  + +f++++A++  +++++++A+++++ +i
   EPX71140.1 240 TEKFFIAFAKFEIRQKEYERARTIFKYAI 268
                  468**********************9886 PP

  == domain 4  score: 12.4 bits;  conditional E-value: 0.00012
                  HHHHHHHHHHTG.....-THHHHHHHHHHHHHH-TT-T.TT-HHHHHHHHHHHTTTSGGGTT-HHHHHHHHHHHTTS.......S-HHHHHHHHHH.. CS
  Mad3_BUB1_I   2 erqefeeeleea.eegdDpLelwlryikwieesypqsskesgllellerclkkfkdderYknDpRylklwlkyadlv.......eepreifkflas.. 89 
                  +r ++e+el+e+ +      ++wl+ ik  e++       +++ e++e+++ k+ ++++ +   Ry+ +wl+y+ +        e++r+++ + ++  
   EPX71140.1 304 RRLAYENELKENpY----DYDVWLDLIKLEEKTGDF----ERIREMYEQAIAKVPESKEKRAWSRYIYIWLNYVLFEeidaseaERARNVYLQCLKli 393
                  57789999999654....478******987776544....78*******************************9988888888777788876654411 PP

                  HTTSTTBHHHHHHHHHHHHHTT-HHHHHHHHH CS
  Mad3_BUB1_I  90 kkiGtklalfYeewAellekkgrfkeAeevye 121
                   +   ++a+ ++ +A +  ++++++ A++ + 
   EPX71140.1 394 PHKSFTFAKVWIMYAMFELRQQNIDAARKTLG 425
                  23345688999999999999999999988775 PP

  == domain 5  score: 4.4 bits;  conditional E-value: 0.038
                  -HHHHHHHHHHHTTS......S-HHHHHHHHHHHTTSTTBHHHHHHHHHHHHHTT-HHHHHHHHHH CS
  Mad3_BUB1_I  63 DpRylklwlkyadlv......eepreifkflaskkiGtklalfYeewAellekkgrfkeAeevyel 122
                  Dp     wl ya+l       +++r +f+   ++ + ++  l ++++  +  ++ ++++A+++y++
   EPX71140.1 464 DPEACAPWLGYANLEnklgdtDRARAVFELAVAQPVLETPELVWKAYIDFEFEEMEYERARSLYQR 529
                  5555667999999887888888899************************************99985 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.1     0.052        49       5      55 ..      80     130 ..      73     138 .. 0.76
   2 ?   -3.1   0.0       9.6   9.1e+03      17      29 ..     160     172 ..     157     174 .. 0.82
   3 ?    1.8   0.1      0.29   2.7e+02       7      33 ..     183     209 ..     179     211 .. 0.86
   4 ?   -2.3   0.0       5.6   5.3e+03      28      61 ..     318     351 ..     306     357 .. 0.66
   5 ?    0.9   0.0      0.55   5.2e+02      35      62 ..     407     434 ..     374     439 .. 0.77
   6 ?    6.8   0.0    0.0078       7.4      10      58 ..     449     497 ..     446     499 .. 0.91
   7 ?   -1.1   0.0       2.2   2.1e+03       9      27 ..     518     536 ..     515     537 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.052
       TPR_9   5 aireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeay 55 
                  +++++++ra  v er + ++P+ + +++    ++++  +++ A++ ++++
  EPX71140.1  80 ELEQKEYARARSVFERAIDVDPKYIPLWLKYIECEMKTRNINHARNLFDRA 130
                 577889999999999999999999988887777777777777666666665 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 9.6
       TPR_9  17 vverllllaPddp 29 
                 + er l ++Pd++
  EPX71140.1 160 IFERWLKWQPDEV 172
                 67999*****986 PP

  == domain 3  score: 1.8 bits;  conditional E-value: 0.29
       TPR_9   7 reedweralavverllllaPddpeerr 33 
                 r +++era  + er ++++Pd +  +r
  EPX71140.1 183 RYHENERARGIFERFVIVHPDVVNWLR 209
                 567899***************988776 PP

  == domain 4  score: -2.3 bits;  conditional E-value: 5.6
       TPR_9  28 dpeerrdRGlllaqlGclsaAladLeaylalapd 61 
                 d + ++d   l+++ G+++  ++  e+++a+ p+
  EPX71140.1 318 DYDVWLDLIKLEEKTGDFERIREMYEQAIAKVPE 351
                 5555666666667777777777777777766665 PP

  == domain 5  score: 0.9 bits;  conditional E-value: 0.55
       TPR_9  35 RGlllaqlGclsaAladLeaylalapda 62 
                  ++ + ++ ++ aA++ L ++l ++p++
  EPX71140.1 407 YAMFELRQQNIDAARKTLGRALGMCPKP 434
                 6777788899999*********999975 PP

  == domain 6  score: 6.8 bits;  conditional E-value: 0.0078
       TPR_9  10 dweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylal 58 
                 +++r+   +e  ++ +P+++  ++  + l+ +lG++  A+a +e ++a+
  EPX71140.1 449 QFDRCRILYEKWIVYDPEACAPWLGYANLENKLGDTDRARAVFELAVAQ 497
                 7888888899999****************************99988875 PP

  == domain 7  score: -1.1 bits;  conditional E-value: 2.2
       TPR_9   9 edweralavverllllaPd 27 
                  ++era   ++rll  aP+
  EPX71140.1 518 MEYERARSLYQRLLETAPH 536
                 57899999999**999998 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.0    0.0025       2.4       5      28 ..      81     104 ..      77     109 .. 0.86
   2 ?   -2.7   0.0       5.2   4.9e+03       7      25 ..     254     272 ..     252     274 .. 0.78
   3 ?   -1.2   0.0       1.8   1.7e+03      17      23 ..     342     348 ..     333     352 .. 0.60
   4 ?   -2.8   0.0       5.7   5.4e+03      11      23 ..     380     392 ..     377     394 .. 0.83
   5 ?   -1.3   0.0         2   1.8e+03       7      25 ..     414     432 ..     412     433 .. 0.83
   6 ?   -2.8   0.0       5.7   5.4e+03       9      22 ..     519     532 ..     515     533 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0025
      TPR_11   5 yeqGkyeeAieaYkkAlkldPdna 28 
                  eq +y  A  ++++A++ dP++ 
  EPX71140.1  81 LEQKEYARARSVFERAIDVDPKYI 104
                 6899*****************996 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 5.2
      TPR_11   7 qGkyeeAieaYkkAlkldP 25 
                 q +ye A + +k A+++ P
  EPX71140.1 254 QKEYERARTIFKYAIDFMP 272
                 6799999998888887755 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 1.8
      TPR_11  17 YkkAlkl 23 
                 Y++A++ 
  EPX71140.1 342 YEQAIAK 348
                 6666655 PP

  == domain 4  score: -2.8 bits;  conditional E-value: 5.7
      TPR_11  11 eeAieaYkkAlkl 23 
                 e A ++Y + lkl
  EPX71140.1 380 ERARNVYLQCLKL 392
                 78999**999887 PP

  == domain 5  score: -1.3 bits;  conditional E-value: 2
      TPR_11   7 qGkyeeAieaYkkAlkldP 25 
                 q+++++A + + +Al  +P
  EPX71140.1 414 QQNIDAARKTLGRALGMCP 432
                 7899**********96666 PP

  == domain 6  score: -2.8 bits;  conditional E-value: 5.7
      TPR_11   9 kyeeAieaYkkAlk 22 
                 +ye A   Y++ l+
  EPX71140.1 519 EYERARSLYQRLLE 532
                 79999999999775 PP

>> U3_assoc_6  U3 small nucleolar RNA-associated protein 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0   0.00078      0.73      27      63 ..      54      90 ..      41      91 .. 0.88
   2 ?    6.7   0.1    0.0082       7.8      23      63 ..      84     124 ..      82     126 .. 0.87
   3 ?   -1.4   0.1       2.8   2.6e+03      10      53 ..     139     181 ..     132     191 .. 0.60
   4 ?   -1.3   0.1       2.5   2.3e+03      29      55 ..     261     289 ..     247     293 .. 0.77
   5 ?   -0.5   0.9       1.4   1.3e+03      27      69 ..     303     348 ..     287     363 .. 0.65
   6 ?    3.4   0.1     0.087        82      41      63 ..     432     454 ..     426     460 .. 0.83
   7 ?   -2.5   0.0         6   5.7e+03      22      36 ..     619     633 ..     616     640 .. 0.75

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00078
  U3_assoc_6 27 kkrrkfEyklqrrgkkkedflkYieyElnLeklrkkR 63
                +kr+ fE ++ r +     +++Y ++El+ ++  + R
  EPX71140.1 54 RKRKGFEDAIRRNRLAMGHWMRYGQWELEQKEYARAR 90
                79*************************9977766665 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0082
  U3_assoc_6  23 keIvkkrrkfEyklqrrgkkkedflkYieyElnLeklrkkR 63 
                 ke ++ r+ fE ++   +k +  +lkYie E++  ++ + R
  EPX71140.1  84 KEYARARSVFERAIDVDPKYIPLWLKYIECEMKTRNINHAR 124
                 5667899*************************988776665 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 2.8
  U3_assoc_6  10 dleekglFtkeEikeIvkkrrkfEyklqrrgkkkedflkYieyE 53 
                 +l  k ++ +e +++I+  r+ fE  l + ++    +++Yi+ E
  EPX71140.1 139 KLWYKYVYMEEMLENITGCRQIFERWL-KWQPDEVAWMSYIRLE 181
                 555555555555666666667777666.3444555677777666 PP

  == domain 4  score: -1.3 bits;  conditional E-value: 2.5
  U3_assoc_6  29 rrkfEyklq..rrgkkkedflkYieyEln 55 
                 r+ f y++    r+k+ e + +Y ++E +
  EPX71140.1 261 RTIFKYAIDfmPRSKSAELYKEYTHFEKQ 289
                 66666666655688899999999999975 PP

  == domain 5  score: -0.5 bits;  conditional E-value: 1.4
  U3_assoc_6  27 kkrrkfEyklqrrgkkkedflkYieyEln...LeklrkkRrkrlkl 69 
                 k+r ++E++l+  +   + +l  i+ E +    e++r+++ +++  
  EPX71140.1 303 KRRLAYENELKENPYDYDVWLDLIKLEEKtgdFERIREMYEQAIAK 348
                 7788888888888888888888888885422256666666666555 PP

  == domain 6  score: 3.4 bits;  conditional E-value: 0.087
  U3_assoc_6  41 kkkedflkYieyElnLeklrkkR 63 
                 +k++ f +YieyE ++++  + R
  EPX71140.1 432 PKPKLFRSYIEYEDSIKQFDRCR 454
                 57788********9998877766 PP

  == domain 7  score: -2.5 bits;  conditional E-value: 6
  U3_assoc_6  22 ikeIvkkrrkfEykl 36 
                 + ++v+krr  E+ l
  EPX71140.1 619 TPQMVTKRRRLENGL 633
                 567889999998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (675 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       897  (0.0500307); expected 358.6 (0.02)
Passed bias filter:                      525  (0.0292822); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                        21  (0.00117129); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              19  [number of targets reported over threshold]
# CPU time: 0.73u 0.25s 00:00:00.98 Elapsed: 00:00:00.45
# Mc/sec: 4466.74
//
Query:       EPX71141.1  [L=181]
Description: RNA-binding protein Tma20 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.6e-25   87.4   0.1    1.1e-24   86.9   0.1    1.2  1  Pre-PUA   Pre-PUA-like domain
    7.5e-18   64.3   0.1    1.1e-17   63.7   0.1    1.3  1  PUA       PUA domain


Domain annotation for each model (and alignments):
>> Pre-PUA  Pre-PUA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.9   0.1   1.2e-28   1.1e-24       1      87 []       5      89 ..       5      89 .. 0.99

  Alignments for each domain:
  == domain 1  score: 86.9 bits;  conditional E-value: 1.2e-28
     Pre-PUA  1 fkkkfkvksntqlksSdrrkLraklleqfpslseeqleellpkkeevkvvklqgehvelyvvdgeplffqdregellPtlytlwkyP 87
                f++k++ k  t++ksS +r++++kl+e+fp+l e+++++l+pkk++++++k++ e++ ly+ +ge+++fq+ +g+++P+l++++k+P
  EPX71141.1  5 FNSKEDFKGTTPIKSSIQRGIKSKLVETFPKL-EQVIDDLIPKKSQLTQIKCE-ERIFLYALNGEIILFQHFDGPVIPSLRLIHKCP 89
                7899****************************.********************.********************************9 PP

>> PUA  PUA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.7   0.1   1.2e-21   1.1e-17       1      74 []      93     171 ..      93     171 .. 0.96

  Alignments for each domain:
  == domain 1  score: 63.7 bits;  conditional E-value: 1.2e-21
                 CEEEE-HHHHHHHHTT-EEEGGGEEEEETT-....-TTSEEEEEETT.SCEEEEEEESS-HHHHHHHCTSEEEEEEEEE CS
         PUA   1 grvvvddgAvkallsgasLlapGvvevegdf....eegdvVaivded.gelvavGlanysseelakikggksveiervl 74 
                 ++v vd+gA+k++lsga++++pG+++++g++     +++ V+i++e+   + a+G+++++++e+ + ++g+++e+ ++l
  EPX71141.1  93 PQVRVDRGAIKFVLSGANIMIPGLTSAGGNLpediGKDQYVVIMAEGkSAPAAIGITQMTAKEMIETNKGIGIENVHHL 171
                 5799**************************9988899*********769****************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       360  (0.0200792); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1323.51
//
Query:       EPX71142.1  [L=918]
Description: hira protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.8e-65  220.1   0.0    7.2e-65  218.8   0.0    1.8  1  Hira         TUP1-like enhancer of split
    5.8e-31  106.1  29.9      7e-08   33.0   0.3    7.9  8  WD40         WD domain, G-beta repeat
    2.8e-10   40.4   0.2        1.8    8.9   0.0    7.1  8  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    4.2e-09   36.0   5.2    5.2e-09   35.7   2.0    2.4  2  HIRA_B       HIRA B motif
    1.7e-06   27.8   1.8       0.17   11.9   0.1    5.0  5  PD40         WD40-like Beta Propeller Repeat
  ------ inclusion threshold ------
      0.013   14.5   0.1         21    3.9   0.0    3.9  4  Ge1_WD40     WD40 region of Ge1, enhancer of mRNA-decapping p
      0.019   14.9   0.1       0.44   10.4   0.0    3.2  4  eIF2A        Eukaryotic translation initiation factor eIF2A


Domain annotation for each model (and alignments):
>> Hira  TUP1-like enhancer of split
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  218.8   0.0   2.8e-68   7.2e-65       1     221 [.     654     868 ..     654     869 .. 0.99

  Alignments for each domain:
  == domain 1  score: 218.8 bits;  conditional E-value: 2.8e-68
        Hira   1 GrrllPplvlespasfLessgsyLlavtsvgllyvWnvkkkkvllppvslapllssssrssekeltrapavtsasltsnGvpivtlsngdgylydkslk 99 
                 G+rllPp++++s+++fLe+++++L+++ s+g+ + W++ +kk+l+ ++slap l+s+++ +++e +  p++ sa+++++Gvp + ls+g++++y++ + 
  EPX71142.1 654 GSRLLPPVMVDSKPVFLECNNNFLFCICSNGMTHAWDIPNKKALFGSCSLAPALDSATQLKSDEPHIVPHIISANISREGVPSISLSTGQTFVYSSLML 752
                 99************************************************************************************************* PP

        Hira 100 tWlrvsdswwalgsqywdsrdsstsssassasgilsalerktneevlrkgrakllqrlaktllekegfenleesvtlahlEnrlaaallLgsadEfkkw 198
                 +W+rvsd+wwa+gs+ wds++ ++++       +l++ e++tn+ +++ gr+k+l++++++ + +eg+e++e+++t++hlE+r++aa lL+ +dEf ++
  EPX71142.1 753 SWQRVSDPWWAFGSKHWDSNGIENKD------RPLRFYEQQTNDTLMEMGRGKFLHKMVEDFTHEEGYEDFERVMTINHLEHRISAARLLNLSDEFLET 845
                 **********************9976......4****************************************************************** PP

        Hira 199 llaYakrLaeeglesrlrelcke 221
                    Y+k L++ g++s+++e+++e
  EPX71142.1 846 SESYCKLLMQSGCWSKMEEFLDE 868
                 ********************987 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   1.5     4e-09     1e-05       8      38 .]      15      46 ..       6      46 .. 0.85
   2 !   33.0   0.3   2.7e-11     7e-08       7      37 ..      68      99 ..      63     100 .. 0.86
   3 !   19.4   1.5   5.6e-07    0.0014       6      38 .]     127     160 ..     121     160 .. 0.88
   4 !   21.3   0.0   1.4e-07   0.00036       4      37 ..     167     201 ..     164     202 .. 0.87
   5 ?    1.0   0.0      0.37   9.5e+02      17      28 ..     229     240 ..     217     245 .. 0.85
   6 !   11.0   0.0   0.00024      0.62       7      37 ..     264     304 ..     258     305 .. 0.70
   7 !    9.1   0.1     0.001       2.6      10      35 ..     320     345 ..     313     346 .. 0.77
   8 ?   -3.1   0.1         7   1.8e+04      24      37 ..     638     650 ..     633     651 .. 0.73

  Alignments for each domain:
  == domain 1  score: 26.2 bits;  conditional E-value: 4e-09
                ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38
                +GH  s+ s+ ++pdg+ +a+G+ DgtvriW+
  EPX71142.1 15 RGHrLSIFSVHVHPDGSRIATGGLDGTVRIWS 46
                589777*************************5 PP

  == domain 2  score: 33.0 bits;  conditional E-value: 2.7e-11
                EESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  7 ltGH.ssvtslafspdgawlasGsdDgtvriW 37
                 ++H + vts++fsp+g++lasGsdD+ v iW
  EPX71142.1 68 MSTHtGTVTSVRFSPNGQYLASGSDDRVVIIW 99
                4678555************************* PP

  == domain 3  score: 19.4 bits;  conditional E-value: 5.6e-07
                 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  l GH +++ ++++s d+++++s + D ++ +W+
  EPX71142.1 127 RLLGHdNDIQDICWSYDSQLFVSVGLDSSIIVWN 160
                 455**999*************99889*******8 PP

  == domain 4  score: 21.3 bits;  conditional E-value: 1.4e-07
                 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 l+ +++H s+v ++ f+p g+++a+ sdD+t+++W
  EPX71142.1 167 LKRIEAHqSHVKGITFDPAGRYFATESDDRTIKVW 201
                 556689*999*************97699******* PP

  == domain 5  score: 1.0 bits;  conditional E-value: 0.37
                 EEETTSSEEEEE CS
        WD40  17 afspdgawlasG 28 
                 ++spdg+ +a++
  EPX71142.1 229 SWSPDGKHIAAS 240
                 49******9865 PP

  == domain 6  score: 11.0 bits;  conditional E-value: 0.00024
                 EESS.SS..EEEEE...EETTSSE....EEEEETTSEEEEE CS
        WD40   7 ltGH.ss..vtsla...fspdgaw....lasGsdDgtvriW 37 
                 l GH ++  vts+    f +++      la+G+ D+++ iW
  EPX71142.1 264 LIGHeGPveVTSFNpklFKDNNEKlvciLACGGQDRSLSIW 304
                 67887666678886665444444456657899********* PP

  == domain 7  score: 9.1 bits;  conditional E-value: 0.001
                 SSSEEEEEEETTSSEEEEEETTSEEE CS
        WD40  10 HssvtslafspdgawlasGsdDgtvr 35 
                 ++s+ ++++spdg  l  +s+Dgt+ 
  EPX71142.1 320 QKSIGDVCWSPDGLSLYLCSYDGTLL 345
                 46799**********964677***86 PP

  == domain 8  score: -3.1 bits;  conditional E-value: 7
                 EEEEEETTSEEEEE CS
        WD40  24 wlasGsdDgtvriW 37 
                 w ++++ D +++++
  EPX71142.1 638 WAVACD-DASLHVY 650
                 666566.9999887 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0    0.0023       5.9      34      70 ..      14      50 ..       2      69 .. 0.83
   2 !    8.9   0.0   0.00072       1.8      36      68 ..      70     102 ..      58     105 .. 0.86
   3 !    6.3   0.0    0.0046        12      37      89 ..     131     182 ..     121     185 .. 0.88
   4 ?    4.5   0.0     0.017        43      34      68 ..     170     204 ..     157     215 .. 0.81
   5 ?   -0.5   0.0      0.61   1.6e+03      45      58 ..     229     242 ..     222     261 .. 0.79
   6 !    5.5   0.0    0.0082        21      37      72 ..     319     354 ..     297     368 .. 0.81
   7 ?   -1.9   0.0       1.6   4.2e+03      51      73 ..     636     658 ..     634     675 .. 0.76
   8 ?   -1.9   0.0       1.6   4.1e+03      39      63 ..     852     876 ..     827     888 .. 0.72

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0023
  ANAPC4_WD40 34 edkedsevrsLaWkpdgklLavaysdgevrlldaesg 70
                 + ++  ++ s++ +pdg+ +a +  dg+vr+ + e  
   EPX71142.1 14 DRGHRLSIFSVHVHPDGSRIATGGLDGTVRIWSTEAI 50
                 56677889999********************999865 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00072
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldae 68 
                  ++ ++v+s++++p+g+ La + +d  v + + e
   EPX71142.1  70 THTGTVTSVRFSPNGQYLASGSDDRVVIIWHKE 102
                  67889****************999988888766 PP

  == domain 3  score: 6.3 bits;  conditional E-value: 0.0046
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                  +d+ +++++W+ d +l++ +  d+++ + +  + + ++ +++++++ v+ +++
   EPX71142.1 131 HDNDIQDICWSYDSQLFVSVGLDSSIIVWNGTTFERLKRIEAHQSH-VKGITF 182
                  7899**************************9999999999999984.776665 PP

  == domain 4  score: 4.5 bits;  conditional E-value: 0.017
  ANAPC4_WD40  34 edkedsevrsLaWkpdgklLavaysdgevrlldae 68 
                   ++++s+v+++ + p g+ +a   +d ++++  ++
   EPX71142.1 170 IEAHQSHVKGITFDPAGRYFATESDDRTIKVWRVS 204
                  47899************************998776 PP

  == domain 5  score: -0.5 bits;  conditional E-value: 0.61
  ANAPC4_WD40  45 aWkpdgklLavays 58 
                  +W+pdgk +a + +
   EPX71142.1 229 SWSPDGKHIAASNA 242
                  7******9998765 PP

  == domain 6  score: 5.5 bits;  conditional E-value: 0.0082
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkv 72 
                   ++++ +++W+pdg  L     dg++ ++  e+ ++
   EPX71142.1 319 CQKSIGDVCWSPDGLSLYLCSYDGTLLVCTFEEHEL 354
                  578899*******************99999888765 PP

  == domain 7  score: -1.9 bits;  conditional E-value: 1.6
  ANAPC4_WD40  51 klLavaysdgevrlldaesgkvv 73 
                  ++ ava++d ++++++    +++
   EPX71142.1 636 HFWAVACDDASLHVYSLTGSRLL 658
                  56799999999999987766655 PP

  == domain 8  score: -1.9 bits;  conditional E-value: 1.6
  ANAPC4_WD40  39 sevrsLaWkpdgklLavaysdgevr 63 
                     +s +W++ +++L  +y+d+++ 
   EPX71142.1 852 LLMQSGCWSKMEEFLDEVYADTKIT 876
                  55567799999***99999999885 PP

>> HIRA_B  HIRA B motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.7   2.0     2e-12   5.2e-09       1      21 [.     462     482 ..     462     483 .. 0.94
   2 ?    0.3   0.1      0.26   6.7e+02      16      23 .]     627     634 ..     626     634 .. 0.90

  Alignments for each domain:
  == domain 1  score: 35.7 bits;  conditional E-value: 2e-12
      HIRA_B   1 KQkvTitKdGKKRVaPtLiSs 21 
                 +Qk+TitKdGKKRVaP L+++
  EPX71142.1 462 TQKITITKDGKKRVAPQLLTT 482
                 6******************98 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.26
      HIRA_B  16 PtLiSsss 23 
                 P+L+S++s
  EPX71142.1 627 PVLLSTGS 634
                 ******97 PP

>> PD40  WD40-like Beta Propeller Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.47   1.2e+03      17      24 ..      27      34 ..      26      34 .. 0.88
   2 !    5.3   0.0    0.0074        19       6      24 ..      70      88 ..      68      88 .. 0.84
   3 !   11.9   0.1   6.6e-05      0.17      12      24 ..     226     238 ..     214     238 .. 0.82
   4 !    5.0   0.1    0.0093        24      16      27 ..     328     339 ..     322     344 .. 0.86
   5 ?   -3.5   0.0       4.5   1.1e+04      15      22 ..     466     473 ..     465     473 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.47
                -TTSSEEE CS
        PD40 17 SPDGkrla 24
                 PDG+r+a
  EPX71142.1 27 HPDGSRIA 34
                6*****97 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.0074
                SSSS.EEEEEE-TTSSEEE CS
        PD40  6 ntpgnegaPsfSPDGkrla 24
                +++g  ++ +fSP+G++la
  EPX71142.1 70 THTGTVTSVRFSPNGQYLA 88
                677778899********97 PP

  == domain 3  score: 11.9 bits;  conditional E-value: 6.6e-05
                 EEEEE-TTSSEEE CS
        PD40  12 gaPsfSPDGkrla 24 
                   Ps+SPDGk +a
  EPX71142.1 226 RRPSWSPDGKHIA 238
                 56********997 PP

  == domain 4  score: 5.0 bits;  conditional E-value: 0.0093
                 E-TTSSEEEEEE CS
        PD40  16 fSPDGkrlaFsS 27 
                 +SPDG +l+ +S
  EPX71142.1 328 WSPDGLSLYLCS 339
                 ********9666 PP

  == domain 5  score: -3.5 bits;  conditional E-value: 4.5
                 EE-TTSSE CS
        PD40  15 sfSPDGkr 22 
                 ++++DGk+
  EPX71142.1 466 TITKDGKK 473
                 789***96 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0    0.0081        21     189     215 ..      20      46 ..      10      63 .. 0.85
   2 ?    2.7   0.0     0.019        49     180     214 ..      64      99 ..      44     102 .. 0.77
   3 ?    2.3   0.0     0.026        66     183     217 ..     169     204 ..     132     213 .. 0.87
   4 ?   -1.0   0.0      0.25   6.5e+02     180     211 ..     311     344 ..     296     349 .. 0.75

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.0081
    Ge1_WD40 189 liveaafspdGtalatasedGevkffq 215
                  i +  + pdG  +at   dG+v+ + 
  EPX71142.1  20 SIFSVHVHPDGSRIATGGLDGTVRIWS 46 
                 56677789****************996 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.019
    Ge1_WD40 180 gllkieehs.liveaafspdGtalatasedGevkff 214
                  l  ++ h+ ++++  fsp+G  la  s d +v  +
  EPX71142.1  64 QLCCMSTHTgTVTSVRFSPNGQYLASGSDDRVVIIW 99 
                 44455666669*******************998766 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.026
    Ge1_WD40 183 kieeh.sliveaafspdGtalatasedGevkffqvy 217
                 +ie h s++   +f p G   at s d ++k ++v 
  EPX71142.1 169 RIEAHqSHVKGITFDPAGRYFATESDDRTIKVWRVS 204
                 677773699999*********************985 PP

  == domain 4  score: -1.0 bits;  conditional E-value: 0.25
    Ge1_WD40 180 gllkieehs..liveaafspdGtalatasedGev 211
                  +l+ ++     i +  +spdG +l  +s dG++
  EPX71142.1 311 PMLNCQNVCqkSIGDVCWSPDGLSLYLCSYDGTL 344
                 55555555323688999**************975 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.89   2.3e+03     141     159 ..      70      88 ..      57      92 .. 0.67
   2 ?   10.4   0.0   0.00017      0.44     105     163 ..     137     194 ..     120     212 .. 0.84
   3 ?   -3.6   0.0       3.4   8.8e+03     150     160 ..     229     239 ..     227     242 .. 0.78
   4 ?   -1.1   0.0      0.59   1.5e+03      59      75 ..     320     336 ..     279     350 .. 0.65

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.89
                 EE-TT--EEEE-TTSSEEE CS
       eIF2A 141 aeaanatlvewspdgryvl 159
                 ++  + t+v +sp+g+y++
  EPX71142.1  70 THTGTVTSVRFSPNGQYLA 88 
                 4445567788888888875 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00017
                 EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-TT--E..EEE-TTSSEEEEEE- CS
       eIF2A 105 tiffspkgklvllaGfgnlaGeleiwdvkkkkkiakaeaanatl..vewspdgryvlTatt 163
                  i +s+  +l++  G+ +    + +w+ ++++ ++++ea ++ +  + ++p+gry++T + 
  EPX71142.1 137 DICWSYDSQLFVSVGLDSS---IIVWNGTTFERLKRIEAHQSHVkgITFDPAGRYFATESD 194
                 6899999999999998875...9************9999887643399*********9875 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 3.4
                 EE-TTSSEEEE CS
       eIF2A 150 ewspdgryvlT 160
                  wspdg++++ 
  EPX71142.1 229 SWSPDGKHIAA 239
                 59999999875 PP

  == domain 4  score: -1.1 bits;  conditional E-value: 0.59
                 SS.EEEEEE-TTSS-EE CS
       eIF2A  59 egpihdvaWspkskefa 75 
                 +  i dv+Wsp++  ++
  EPX71142.1 320 QKSIGDVCWSPDGLSLY 336
                 23466666666665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (918 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       534  (0.0297841); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.69u 0.30s 00:00:00.99 Elapsed: 00:00:00.45
# Mc/sec: 6147.39
//
Query:       EPX71143.1  [L=1623]
Description: HIRA interacting protein Hip3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-06   28.4   8.7     0.0069   16.4   0.0    4.8  4  TPR_2     Tetratricopeptide repeat
    5.2e-06   26.3   9.8     0.0029   17.7   0.1    4.3  4  TPR_8     Tetratricopeptide repeat
     0.0018   18.5   1.2       0.35   11.2   0.0    3.2  3  TPR_12    Tetratricopeptide repeat
     0.0021   18.6   4.7       0.47   11.2   0.1    4.3  4  TPR_6     Tetratricopeptide repeat
     0.0028   17.4  10.1      0.014   15.2   0.0    4.9  5  TPR_1     Tetratricopeptide repeat
     0.0033   17.3   0.1       0.15   12.1   0.0    3.1  2  TPR_7     Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.038   14.8   1.5        1.7    9.7   0.0    3.8  4  TPR_14    Tetratricopeptide repeat
      0.086   13.5   0.2          2    9.1   0.0    2.9  2  TPR_16    Tetratricopeptide repeat
       0.14   12.6   2.2         10    6.7   0.0    3.8  4  TPR_17    Tetratricopeptide repeat
          5    6.9   6.3         23    4.8   0.0    4.0  4  TPR_11    TPR repeat


Domain annotation for each model (and alignments):
>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.8      0.05        89       5      30 ..      32      57 ..      25      58 .. 0.88
   2 ?    0.2   0.0      0.58     1e+03      19      34 .]     115     130 ..     114     130 .. 0.93
   3 !   16.4   0.0   3.9e-06    0.0069       4      33 ..    1232    1261 ..    1229    1262 .. 0.91
   4 !    8.9   0.2   0.00096       1.7       5      29 ..    1354    1378 ..    1353    1380 .. 0.93

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.05
       TPR_2  5 ynlGlayyklgdyeeAleafekAlel 30
                y+ +l++ k +d++ A + +e+ l l
  EPX71143.1 32 YQNALLAQKENDWDLASKNYEELLNL 57
                667889999*************9987 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.58
       TPR_2  19 eAleafekAleldPnn 34 
                 +A+++f  Al+ dPn+
  EPX71143.1 115 QAINDFSIALACDPND 130
                 79************97 PP

  == domain 3  score: 16.4 bits;  conditional E-value: 3.9e-06
       TPR_2    4 lynlGlayyklgdyeeAleafekAleldPn 33  
                    +l+++++klgd + Ale+fe+A + +P+
  EPX71143.1 1232 AIMLAKSLRKLGDMATALEYFEEATKVAPK 1261
                  5789**********************9996 PP

  == domain 4  score: 8.9 bits;  conditional E-value: 0.00096
       TPR_2    5 ynlGlayyklgdyeeAleafekAle 29  
                  y++++++ +l ++eeA++ +ek ++
  EPX71143.1 1354 YRIAKLLDYLEQFEEAKKEMEKLIS 1378
                  899*******************985 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1       2.3   4.1e+03      17      33 ..      25      41 ..      24      57 .. 0.72
   2 ?   -1.6   0.0       2.5   4.5e+03       3      18 ..    1104    1119 ..    1103    1121 .. 0.86
   3 !   17.7   0.1   1.6e-06    0.0029       5      33 ..    1233    1261 ..    1230    1262 .. 0.93
   4 !   12.1   0.5    0.0001      0.18       5      31 ..    1354    1380 ..    1353    1382 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 2.3
                HHHHHHHHHHHHHHHHH CS
       TPR_8 17 yeeAkeyyekaleldpd 33
                +eeA + y+ al ++++
  EPX71143.1 25 IEEALQIYQNALLAQKE 41
                67788888777766554 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 2.5
                  HHHHHHHHHHHTT-HH CS
       TPR_8    3 ayynlgsiylklgdye 18  
                  ++y  + +yl l d e
  EPX71143.1 1104 SWYTSAVLYLALADEE 1119
                  89********999987 PP

  == domain 3  score: 17.7 bits;  conditional E-value: 1.6e-06
                  HHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8    5 ynlgsiylklgdyeeAkeyyekaleldpd 33  
                   +l++ ++klgd+  A ey+e+a++ +p+
  EPX71143.1 1233 IMLAKSLRKLGDMATALEYFEEATKVAPK 1261
                  689************************97 PP

  == domain 4  score: 12.1 bits;  conditional E-value: 0.0001
                  HHHHHHHHHTT-HHHHHHHHHHHHHHH CS
       TPR_8    5 ynlgsiylklgdyeeAkeyyekaleld 31  
                  y+++++++ l+++eeAk+ +ek ++ +
  EPX71143.1 1354 YRIAKLLDYLEQFEEAKKEMEKLISFK 1380
                  89*********************9975 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.2     0.024        44       4      33 ..      30      58 ..      24      68 .. 0.75
   2 !   11.2   0.0    0.0002      0.35       9      34 ..    1235    1260 ..    1230    1273 .. 0.63
   3 ?   -2.4   0.0       3.5   6.3e+03       8      27 ..    1355    1374 ..    1352    1378 .. 0.55

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.024
      TPR_12  4 talnnlaavlrrlgrydeAlellekaleia 33
                +++ + a++ ++  ++d A +++e+ l+++
  EPX71143.1 30 QIY-QNALLAQKENDWDLASKNYEELLNLR 58
                455.77888888888888888888888775 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.0002
      TPR_12    9 laavlrrlgrydeAlellekaleiar 34  
                  la  lr+lg+++ Ale++e+a  +a 
  EPX71143.1 1235 LAKSLRKLGDMATALEYFEEATKVAP 1260
                  56666666666666666666665553 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 3.5
      TPR_12    8 nlaavlrrlgrydeAlelle 27  
                  ++a +l +l++++eA +  e
  EPX71143.1 1355 RIAKLLDYLEQFEEAKKEME 1374
                  44555555555666555444 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       6.5   1.2e+04      17      26 ..      26      35 ..      24      37 .. 0.83
   2 ?    1.3   0.1      0.37   6.7e+02       7      28 ..      35      56 ..      31      58 .. 0.83
   3 !   11.2   0.1   0.00026      0.47       5      31 ..    1234    1260 ..    1232    1261 .. 0.90
   4 ?    4.6   0.2     0.034        61       4      27 ..    1354    1377 ..    1353    1378 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 6.5
                HHHHHHHHHH CS
       TPR_6 17 dkAlealerl 26
                ++Al+++++ 
  EPX71143.1 26 EEALQIYQNA 35
                89*****986 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.37
                HHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6  7 alsyrklgdtdkAlealerlik 28
                al+ +k +d+d A + +e+l++
  EPX71143.1 35 ALLAQKENDWDLASKNYEELLN 56
                56666767***********997 PP

  == domain 3  score: 11.2 bits;  conditional E-value: 0.00026
                  HHHHHHHHHHHHHHHHHHHHHHHHH-T CS
       TPR_6    5 klalsyrklgdtdkAlealerlikeYP 31  
                  +la+s+rklgd ++Ale++e+  k  P
  EPX71143.1 1234 MLAKSLRKLGDMATALEYFEEATKVAP 1260
                  69******************9988766 PP

  == domain 4  score: 4.6 bits;  conditional E-value: 0.034
                  HHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6    4 yklalsyrklgdtdkAlealerli 27  
                  y++a+++  l + ++A++ +e+li
  EPX71143.1 1354 YRIAKLLDYLEQFEEAKKEMEKLI 1377
                  99******988************9 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.2      0.38   6.9e+02      17      28 ..      25      36 ..      24      42 .. 0.85
   2 ?    0.2   0.5      0.43   7.7e+02       8      26 ..      35      53 ..      28      58 .. 0.82
   3 ?    1.6   0.1      0.15   2.7e+02      19      34 .]     115     130 ..     114     130 .. 0.94
   4 !   15.2   0.0   7.6e-06     0.014       7      33 ..    1235    1261 ..    1231    1262 .. 0.94
   5 ?    1.5   0.3      0.17     3e+02       5      21 ..    1354    1370 ..    1354    1371 .. 0.93

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.38
                HHHHHHHHHHHH CS
       TPR_1 17 ydeAleyyekAL 28
                 +eAl+ y+ AL
  EPX71143.1 25 IEEALQIYQNAL 36
                69********99 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.43
                HHHHHHTT-HHHHHHHHHH CS
       TPR_1  8 GnayfklgkydeAleyyek 26
                +++ +k +++d A + ye+
  EPX71143.1 35 ALLAQKENDWDLASKNYEE 53
                7889999**********98 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.15
                 HHHHHHHHHHHHSTTH CS
       TPR_1  19 eAleyyekALelnPnn 34 
                 +A+ +++ AL  +Pn+
  EPX71143.1 115 QAINDFSIALACDPND 130
                 8*************97 PP

  == domain 4  score: 15.2 bits;  conditional E-value: 7.6e-06
                  HHHHHHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1    7 lGnayfklgkydeAleyyekALelnPn 33  
                  l+  ++klg+   Aley+e+A ++ P+
  EPX71143.1 1235 LAKSLRKLGDMATALEYFEEATKVAPK 1261
                  7899********************997 PP

  == domain 5  score: 1.5 bits;  conditional E-value: 0.17
                  HHHHHHHHHTT-HHHHH CS
       TPR_1    5 ynlGnayfklgkydeAl 21  
                  y+++ ++ +l++++eA 
  EPX71143.1 1354 YRIAKLLDYLEQFEEAK 1370
                  899*************7 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.1      0.25   4.5e+02       8      29 ..      37      58 ..      26      67 .. 0.82
   2 !   12.1   0.0   8.5e-05      0.15       5      32 ..    1235    1260 ..    1233    1262 .. 0.89

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.25
       TPR_7  8 lysrlGdyeeAielyeqsLalt 29
                l ++++d++ A + ye++L l+
  EPX71143.1 37 LAQKENDWDLASKNYEELLNLR 58
                5678999999999999988776 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 8.5e-05
       TPR_7    5 LarlysrlGdyeeAielyeqsLaltkdp 32  
                  La   ++lGd+++A+e++e+  a+  +p
  EPX71143.1 1235 LAKSLRKLGDMATALEYFEE--ATKVAP 1260
                  89999***************..988766 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1       5.5   9.8e+03      17      34 ..      25      42 ..      24      47 .. 0.72
   2 ?   -0.1   0.0       1.3   2.4e+03      19      43 ..     115     139 ..     114     140 .. 0.86
   3 ?    9.7   0.0   0.00093       1.7       5      33 ..    1233    1261 ..    1229    1262 .. 0.91
   4 ?   -0.1   0.0       1.3   2.3e+03       4      29 ..    1353    1378 ..    1350    1382 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 5.5
      TPR_14 17 pdeAiallrralalaPdd 34
                 +eA+++++ al ++ ++
  EPX71143.1 25 IEEALQIYQNALLAQKEN 42
                689999999997666554 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 1.3
      TPR_14  19 eAiallrralalaPddaeawlllaq 43 
                 +Ai+ +  ala +P+d ++w+  a+
  EPX71143.1 115 QAINDFSIALACDPNDIDLWTKVAE 139
                 68888999************98776 PP

  == domain 3  score: 9.7 bits;  conditional E-value: 0.00093
      TPR_14    5 lalaeallalGdpdeAiallrralalaPd 33  
                   +la+ l+ lGd ++A++++++a + aP+
  EPX71143.1 1233 IMLAKSLRKLGDMATALEYFEEATKVAPK 1261
                  689*********************99996 PP

  == domain 4  score: -0.1 bits;  conditional E-value: 1.3
      TPR_14    4 llalaeallalGdpdeAiallrrala 29  
                  ++++a++l  l++++eA +  +++++
  EPX71143.1 1353 TYRIAKLLDYLEQFEEAKKEMEKLIS 1378
                  6889999999*******999988876 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.3      0.56     1e+03       1      24 [.      32      55 ..      32      58 .. 0.91
   2 ?    9.1   0.0    0.0011         2       2      28 ..    1234    1260 ..    1233    1266 .. 0.90

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.56
      TPR_16  1 lalaraalragdyddAaaaleaal 24
                ++ a++a + +d+d A + +e++l
  EPX71143.1 32 YQNALLAQKENDWDLASKNYEELL 55
                67899****************998 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0011
      TPR_16    2 alaraalragdyddAaaaleaalkrdp 28  
                  +la++++++gd + A++++e+a+k +p
  EPX71143.1 1234 MLAKSLRKLGDMATALEYFEEATKVAP 1260
                  89*********************9984 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.0    0.0059        10       5      25 ..     123     143 ..     123     147 .. 0.88
   2 ?   -3.0   0.0       7.6   1.4e+04      13      26 ..    1102    1115 ..    1097    1119 .. 0.71
   3 ?    2.9   0.0       0.1   1.8e+02      11      34 .]    1227    1250 ..    1226    1250 .. 0.90
   4 ?   -3.1   0.1       8.2   1.5e+04      16      25 ..    1400    1409 ..    1400    1411 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0059
      TPR_17   5 aleldPnnadaynnLAelllk 25 
                 al++dPn+ d+++  Ael +k
  EPX71143.1 123 ALACDPNDIDLWTKVAELAEK 143
                 79***********99998765 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 7.6
      TPR_17   13 adaynnLAelllkn 26  
                   d+++  A+l+l +
  EPX71143.1 1102 QDSWYTSAVLYLAL 1115
                  57888888888865 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.1
      TPR_17   11 nnadaynnLAelllknGdlmtArq 34  
                  +++++  +LA+ l+k+Gd +tA++
  EPX71143.1 1227 KDWKVAIMLAKSLRKLGDMATALE 1250
                  68999*************999975 PP

  == domain 4  score: -3.1 bits;  conditional E-value: 8.2
      TPR_17   16 ynnLAelllk 25  
                  y++++++++k
  EPX71143.1 1400 YFYYGTVYSK 1409
                  9*******86 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.3      0.26   4.6e+02       9      21 ..      24      36 ..      24      37 .. 0.92
   2 ?    0.3   0.1      0.32   5.8e+02       7      23 ..      41      57 ..      39      58 .. 0.89
   3 ?    4.8   0.0     0.013        23      12      36 ..     115     139 ..     114     144 .. 0.87
   4 ?    0.2   0.0      0.34     6e+02       3      26 ..    1238    1261 ..    1236    1262 .. 0.88

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.26
      TPR_11  9 kyeeAieaYkkAl 21
                ++eeA++ Y++Al
  EPX71143.1 24 RIEEALQIYQNAL 36
                58**********8 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.32
      TPR_11  7 qGkyeeAieaYkkAlkl 23
                 ++++ A ++Y++ l+l
  EPX71143.1 41 ENDWDLASKNYEELLNL 57
                689**********9998 PP

  == domain 3  score: 4.8 bits;  conditional E-value: 0.013
      TPR_11  12 eAieaYkkAlkldPdnaeayynLGl 36 
                 +Ai++++ Al+ dP++ +++ + ++
  EPX71143.1 115 QAINDFSIALACDPNDIDLWTKVAE 139
                 7*****************9988665 PP

  == domain 4  score: 0.2 bits;  conditional E-value: 0.34
      TPR_11    3 ayyeqGkyeeAieaYkkAlkldPd 26  
                   ++++G+   A+e +++A k  P+
  EPX71143.1 1238 SLRKLGDMATALEYFEEATKVAPK 1261
                  6899**************998775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1623 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       699  (0.0389871); expected 358.6 (0.02)
Passed bias filter:                      475  (0.0264934); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.92u 0.29s 00:00:01.21 Elapsed: 00:00:00.46
# Mc/sec: 10622.24
//
Query:       EPX71144.1  [L=67]
Description: F0-ATPase epsilon subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.4e-18   64.3   0.5    9.4e-18   63.9   0.5    1.1  1  ATP-synt_Eps  Mitochondrial ATP synthase epsilon chain


Domain annotation for each model (and alignments):
>> ATP-synt_Eps  Mitochondrial ATP synthase epsilon chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.9   0.5   5.2e-22   9.4e-18       1      49 []       3      50 ..       3      50 .. 0.98

  Alignments for each domain:
  == domain 1  score: 63.9 bits;  conditional E-value: 5.2e-22
                  --TTTTS--HHHHHHHHHHHCCHSS-TTT--CCCCCS----EEEE--TT CS
  ATP-synt_Eps  1 saWRaaglsYnkYsniaAravRraLKeelraaAekreetelkytkwenG 49
                  +aW+  ++sY+kY++i++++vR+aLK+e r+  + ++++e+ y+kw+nG
    EPX71144.1  3 FAWK-KNFSYSKYASICSQTVRQALKPEIRSDLKGSNNVEFVYAKWKNG 50
                  69**.*******************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       430  (0.0239835); expected 358.6 (0.02)
Passed bias filter:                      218  (0.0121591); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.28s 00:00:00.64 Elapsed: 00:00:00.43
# Mc/sec: 470.96
//
Query:       EPX71145.1  [L=651]
Description: ChAPs family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.3e-152  508.4   0.0   1.9e-152  507.9   0.0    1.2  1  ChAPs     ChAPs (Chs5p-Arf1p-binding proteins)
    0.00011   22.0   2.8        2.7    8.3   0.0    4.9  6  TPR_2     Tetratricopeptide repeat
      0.001   19.6   0.2       0.59   10.7   0.0    2.5  2  TPR_19    Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.013   15.7   3.8       0.53   10.6   0.6    3.1  3  ANAPC3    Anaphase-promoting complex, cyclosome, subunit 3
      0.015   16.0   2.8        2.7    9.0   0.0    4.2  4  TPR_14    Tetratricopeptide repeat
      0.062   13.0   0.3       0.29   10.9   0.2    2.1  2  Rtt106_N  Histone chaperone Rtt106 N-terminal domain
       0.13   12.4   1.1       0.92    9.7   0.1    2.7  3  TPR_9     Tetratricopeptide repeat
       0.44   11.2   4.9       0.64   10.7   0.7    2.6  3  TPR_16    Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> ChAPs  ChAPs (Chs5p-Arf1p-binding proteins)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  507.9   0.0  8.3e-156  1.9e-152       2     395 .]      52     432 ..      51     432 .. 0.99

  Alignments for each domain:
  == domain 1  score: 507.9 bits;  conditional E-value: 8.3e-156
                 XXXEEEEEEEXXXXSXHHHHHHHHHHHHCCSSSSXXXTTSXXXXXECCEEEEEEEETTTTEEEEEEEESSXXEEEEEEETTSXBEEXHHHHHHHHHHHH CS
       ChAPs   2 keiGtyfyvtGvdtSssasiavylkqlteslseksqlwFgkkktfkvskisyctyNaFskvDvrvevkiPGsvesyvvdergekeeatdelWaEtflsg 100
                 ke+Gty++v+G+d+Sssas+a+yl++l++sl +ksq+wF k++t+++s+ +yc+yNaFs++Dvrve+k+PG+v++y +de+g k+++  ++W Et++s+
  EPX71145.1  52 KEVGTYHFVSGIDASSSASLAAYLNTLSYSL-DKSQQWFTKSQTWSISHSVYCCYNAFSRLDVRVEAKVPGGVDTYAIDENGRKHKMDVRMWVETYMSS 149
                 89*****************************.******************************************************************* PP

                 HHHHHHHHHTTTTTTS----TTEEE--GGG--SSS-HHHHHHHTHHHHTTCGGGG---TT-SS--SSSSHHHHHHHHHHHHHT-HHHHHHHHHHHHTT- CS
       ChAPs 101 vlRsllladdnadddevqklvetrklnPltsgelekkaelFlkafeklfekgvklgadsevqvptlvnNyLvetllklvrltkrydralellekLkeee 199
                 +lRsll++d+       +++ ++rk+nP+ ++++e +   F++afe+lf  g  lg+++e++ pt+vnN+Lv++++ +vr+ +r+++al+ lekL+ ++
  EPX71145.1 150 ILRSLLYSDE-----LYSRFTGHRKFNPIPNPDSELR---FFEAFEELFPLGHMLGSSPEIRIPTNVNNHLVRGFFIYVRQNCRFSAALNSLEKLHINS 240
                 ********99.....467*******************...*********************************************************** PP

                 GGGHHHHHHHHHHTT-HHHHHHHHHHHH-SSS-HHHHHHHHHHHHHHSS--HHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHHHHHHHT----S CS
       ChAPs 200 pevvillarvllladeEvdavkllneeleeeekdaelLllqaefllskkkeelAlevakravksaPsefktWalLvkvYikledienALltLNscPmft 298
                 pev++lla+++l +d+Ev+av++l+e+l++++++a+lL++qa fl+sk++++lAl+ akrav+++Psef +W++L++vY++led+++ALl+LNscPm+t
  EPX71145.1 241 PEVSVLLAQLYLYMDHEVHAVRVLHEALQKQRMSADLLVVQARFLVSKERYDLALTSAKRAVHASPSEFLPWICLAEVYLHLEDFDSALLALNSCPMYT 339
                 *************************************************************************************************** PP

                 S--------SS-------EB---TTSS--TT--------SS---S---HHHHT-TTTT--HHHHHHHHHHHHHHHHH-HHHHHHHHHHHB-XXXXXX CS
       ChAPs 299 ykekdvlrriapakseddlhlPlpldvvldevselnssevteeqkevdpsLlrlkaanlkstfakaYelLteivkkiGWeeLLkvRskvFvmeeEYr 395
                 y e+dv+  + pak    +hlPlp+ + ++e++ +n +  t + + vdp L+rl++++l++tfa++Ye+Lt i++kiGW+eLL++Rs+vFvmeeEYr
  EPX71145.1 340 YYERDVYPIPPPAK----AHLPLPVGFPKEELEGENANGRTGSVDMVDPYLARLPSPSLRGTFARVYEVLTLICSKIGWDELLRIRSSVFVMEEEYR 432
                 **************....******************************************************************************8 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       6.6   1.5e+04       1      17 [.      72      88 ..      72      88 .. 0.82
   2 ?   -2.4   0.0       3.3   7.5e+03      13      28 ..     222     237 ..     221     242 .. 0.79
   3 ?    4.4   0.1     0.021        48       5      30 ..     245     270 ..     241     272 .. 0.89
   4 ?    1.3   0.0      0.21   4.7e+02       4      32 ..     278     306 ..     275     307 .. 0.78
   5 !    8.3   0.0    0.0012       2.7       4      24 ..     312     332 ..     309     335 .. 0.89
   6 ?    3.7   0.0     0.036        80       4      24 ..     529     549 ..     526     554 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 6.6
       TPR_2  1 aealynlGlayyklgdy 17
                a +l+ l +++ k++++
  EPX71145.1 72 AAYLNTLSYSLDKSQQW 88
                67899999999998876 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 3.3
       TPR_2  13 klgdyeeAleafekAl 28 
                 ++ ++  Al+ +ek  
  EPX71145.1 222 QNCRFSAALNSLEKLH 237
                 6789999**9999976 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.021
       TPR_2   5 ynlGlayyklgdyeeAleafekAlel 30 
                   l+++y+++++   A++ + +Al+ 
  EPX71145.1 245 VLLAQLYLYMDHEVHAVRVLHEALQK 270
                 679*********************86 PP

  == domain 4  score: 1.3 bits;  conditional E-value: 0.21
       TPR_2   4 lynlGlayyklgdyeeAleafekAleldP 32 
                 l  +++ +  + +y+ Al   ++A+   P
  EPX71145.1 278 LVVQARFLVSKERYDLALTSAKRAVHASP 306
                 555677778899************87666 PP

  == domain 5  score: 8.3 bits;  conditional E-value: 0.0012
       TPR_2   4 lynlGlayyklgdyeeAleaf 24 
                 + +l+++y++l d++ Al a+
  EPX71145.1 312 WICLAEVYLHLEDFDSALLAL 332
                 99***************9876 PP

  == domain 6  score: 3.7 bits;  conditional E-value: 0.036
       TPR_2   4 lynlGlayyklgdyeeAleaf 24 
                 +  lG+++++l +  eA+eaf
  EPX71145.1 529 WEILGEVAFRLHHRVEAVEAF 549
                 788****************98 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4   0.1    0.0057        13       7      59 ..     226     275 ..     221     284 .. 0.83
   2 !   10.7   0.0   0.00026      0.59       4      51 ..     288     335 ..     285     343 .. 0.88

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0057
      TPR_19   7 yaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpdda 59 
                 + +Al+ le++     +++e+  lLA+++l + +   A ++L +++++++ +a
  EPX71145.1 226 FSAALNSLEKL---HINSPEVSVLLAQLYLYMDHEVHAVRVLHEALQKQRMSA 275
                 67899999997...7799************99999999999999988887655 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00026
      TPR_19   4 egdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdal 51 
                  ++y+ Al   ++a  ++p     ++ LAe++l l ++d A  +L+  
  EPX71145.1 288 KERYDLALTSAKRAVHASPSEFLPWICLAEVYLHLEDFDSALLALNSC 335
                 578999**************99999999**************999875 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.6   0.00023      0.53       2      78 ..     223     297 ..     222     301 .. 0.91
   2 ?    5.9   0.2    0.0066        15       3      49 ..     289     335 ..     287     337 .. 0.71
   3 ?   -0.6   0.0      0.72   1.6e+03      53      81 ..     523     551 ..     512     552 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00023
                 TT-HHHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHH CS
      ANAPC3   2 qnnyknAiflaerllaaetespedayllAlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaa 78 
                 + ++  A+  +e+l+    +spe + llA+ ++ +     A ++l++a +++  s   +++ A+ l+  ++y+ A++ 
  EPX71145.1 223 NCRFSAALNSLEKLH---INSPEVSVLLAQLYLYMDHEVHAVRVLHEAlQKQRMSADLLVVQARFLVSKERYDLALTS 297
                 67888999999****...******************************999999999999999999999999999875 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0066
                 T-HHHHHHHHHHHH.HHH--HHHHHH..HHHHHHHTT-HHHHHHHHHCT CS
      ANAPC3   3 nnyknAiflaerllaaetespedayl..lAlclylngqykrAyellrka 49 
                 ++y+ A+  a r++  ++  +e + +  lA+++++++++++A+  l+++
  EPX71145.1 289 ERYDLALTSAKRAV--HASPSEFLPWicLAEVYLHLEDFDSALLALNSC 335
                 67777778888888..344444444444799999999999999888765 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.72
                 HC-HHHHHHHHHHHHHTT-HHHHHHHH-S CS
      ANAPC3  53 skslgcrylfAqcllkLkkyeeAiaaLek 81 
                  ks+  + +++++++ L++  eA+ a+ +
  EPX71145.1 523 RKSPMEWEILGEVAFRLHHRVEAVEAFCA 551
                 5677778999*************999876 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.1      0.61   1.4e+03       6      30 ..     246     270 ..     241     279 .. 0.82
   2 ?    9.0   0.0    0.0012       2.7       4      43 ..     278     317 ..     275     318 .. 0.91
   3 ?    8.0   0.0    0.0026       5.8       4      25 ..     312     333 ..     309     335 .. 0.89
   4 ?   -0.8   0.0       1.7   3.8e+03       4      29 ..     529     554 ..     526     566 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.61
      TPR_14   6 alaeallalGdpdeAiallrralal 30 
                 +la+++l  +    A+++l++al++
  EPX71145.1 246 LLAQLYLYMDHEVHAVRVLHEALQK 270
                 67888888888889********997 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0012
      TPR_14   4 llalaeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 l   a++l   +++d A++ ++ra+ + P++   w+ la+
  EPX71145.1 278 LVVQARFLVSKERYDLALTSAKRAVHASPSEFLPWICLAE 317
                 566799********************************97 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.0026
      TPR_14   4 llalaeallalGdpdeAiallr 25 
                 + +lae++l+l+d+d A+ +l+
  EPX71145.1 312 WICLAEVYLHLEDFDSALLALN 333
                 889**************97776 PP

  == domain 4  score: -0.8 bits;  conditional E-value: 1.7
      TPR_14   4 llalaeallalGdpdeAiallrrala 29 
                 +  l+e+ ++l    eA++++ ++l+
  EPX71145.1 529 WEILGEVAFRLHHRVEAVEAFCACLE 554
                 6779999****9999***99988876 PP

>> Rtt106_N  Histone chaperone Rtt106 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.2   0.00013      0.29       1      34 [.       1      34 [.       1      35 [. 0.98
   2 ?   -1.6   0.0         1   2.3e+03       1      24 [.     381     405 ..     381     406 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00013
    Rtt106_N  1 MteSFldkLPaeLrskvskItsvlPdSlSiFqel 34
                M++SF   +P+ L  +v     +   SlS F+el
  EPX71145.1  1 MSDSFFKDIPEFLETRVNESLEARSKSLSQFKEL 34
                9******************************998 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1
    Rtt106_N   1 MteSFldkLPa.eLrskvskItsvl 24 
                 M + +l +LP   Lr+   ++  vl
  EPX71145.1 381 MVDPYLARLPSpSLRGTFARVYEVL 405
                 7788999999747999888887776 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.86   1.9e+03      39      60 ..     219     241 ..     214     269 .. 0.72
   2 ?    9.7   0.1   0.00041      0.92       6      54 ..     286     334 ..     281     350 .. 0.93
   3 ?   -1.8   0.0       1.6   3.5e+03      27      57 ..     524     554 ..     520     557 .. 0.78

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.86
       TPR_9  39 laqlGc.lsaAladLeaylalap 60 
                 +++++c +saAl+ Le    ++p
  EPX71145.1 219 YVRQNCrFSAALNSLEKLHINSP 241
                 55555548899999987766666 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00041
       TPR_9   6 ireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLea 54 
                  ++e+++ al  + r +   P +   +   + ++ +l+++  Al +L+ 
  EPX71145.1 286 VSKERYDLALTSAKRAVHASPSEFLPWICLAEVYLHLEDFDSALLALNS 334
                 6789***************************************999876 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 1.6
       TPR_9  27 ddpeerrdRGlllaqlGclsaAladLeayla 57 
                 ++p e+   G + ++l +  +A++++ a+l+
  EPX71145.1 524 KSPMEWEILGEVAFRLHHRVEAVEAFCACLE 554
                 5677888888888888888888888888876 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.7   0.00028      0.64       3      66 ..     247     307 ..     245     309 .. 0.90
   2 ?    9.7   0.5   0.00058       1.3       5      57 ..     283     332 ..     280     334 .. 0.89
   3 ?   -2.6   0.0       4.2   9.4e+03      37      56 ..     529     548 ..     529     550 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00028
      TPR_16   3 laraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalraapd 66 
                 la+++l+  +   A+++l++al ++      a+ l   ++ +  + r+++A+   ++a+ a+p+
  EPX71145.1 247 LAQLYLYMDHEVHAVRVLHEALQKQ---RMSADLLVVQARFLVSKERYDLALTSAKRAVHASPS 307
                 67777777777789***********...******************************999997 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00058
      TPR_16   5 raalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAa.aly 57 
                 r ++   +yd A+  +++a+ +    P     +  l++++l++ +++ A+ a +
  EPX71145.1 283 RFLVSKERYDLALTSAKRAVHAS---PSEFLPWICLAEVYLHLEDFDSALlA-L 332
                 5567789****************...***********************955.4 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 4.2
      TPR_16  37 llllgdaalrqgrlaeAaal 56 
                 +  lg++a+r+    eA+++
  EPX71145.1 529 WEILGEVAFRLHHRVEAVEA 548
                 56789999988777777744 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (651 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       623  (0.0347482); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.63u 0.25s 00:00:00.88 Elapsed: 00:00:00.42
# Mc/sec: 4626.03
//
Query:       EPX71146.1  [L=3060]
Description: DUF1162 domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.5e-65  219.4   5.3    2.9e-63  213.8   3.0    2.9  2  SHR-BD         SHR-binding domain of vacuolar-sorting associa
    9.4e-64  214.5   6.6    6.7e-61  205.2   2.1    2.9  2  VPS13_C        Vacuolar-sorting-associated 13 protein C-termi
    8.8e-60  202.0  14.7    2.6e-58  197.2   4.6    4.3  4  VPS13_mid_rpt  Repeating coiled region of VPS13
    4.2e-50  170.8   0.5    5.1e-48  163.9   0.0    3.1  2  VPS13          Vacuolar sorting-associated protein 13, N-term
    2.6e-35  121.0   0.2    1.1e-34  119.0   0.2    2.2  1  Chorein_N      N-terminal region of Chorein or VPS13
    0.00068   19.9   0.0     0.0031   17.8   0.0    2.1  2  ATG_C          Autophagy-related protein C terminal domain
  ------ inclusion threshold ------
      0.013   15.9   0.1      0.047   14.0   0.1    2.0  1  bPH_3          Bacterial PH domain


Domain annotation for each model (and alignments):
>> SHR-BD  SHR-binding domain of vacuolar-sorting associated protein 13
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.5   0.0    0.0073        19     119     260 ..    1797    1945 ..    1793    1951 .. 0.74
   2 !  213.8   3.0   1.1e-66   2.9e-63       2     269 ..    2131    2403 ..    2130    2405 .. 0.94

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.0073
      SHR-BD  119 yilkNklsekleiaqrgs....kkvielkpgeliplhwlrnkeekelv..........irlpesnsqwSggfnisdvgslyvklrrq.nseqvllkv 200 
                  y ++N++ ++l+i  +      + v +l+ g+ +  +++++ + + ++          i +++   q   ++++++vg++ + l  + +s  +++ v
  EPX71146.1 1797 YRIHNHTGHTLSIWADYEgsdnSYVRRLEDGKGTDWKFEEWRQMQDIMkqdgnrscigIHFENGAFQTLRRIQVNKVGEYIFPLISEsSSVKHYIVV 1893
                  889999999999988877665333347777777777777777776666666677776799998899999**********999998864777899999 PP

      SHR-BD  201 eiiledatifikiedaeknewPfsirNeseve..ilfyqrdpelnsdeskplkytlppksvm 260 
                  ++ l       +++  +    P  ++Nes  e  i++ +      + + k+ +yt+ppk+v 
  EPX71146.1 1894 DVSLSRE----YVKHISLR-SPLLLKNESMMEvdIILCDS-----DGHRKSPIYTIPPKEVC 1945
                  9998765....33333444.789*****877744667666.....334557899****9986 PP

  == domain 2  score: 213.8 bits;  conditional E-value: 1.1e-66
      SHR-BD    2 kisIyapywllNkTglpLevrqednsneaagqleee.e.earsltpllfSfddrdtknraqlrignskwskpfsldaigetnevelrsaekesevy. 95  
                  +i+I++py+++NkT  pL + ++++ ++ a ++ +  e ++ +++p+lfS+ ++  ++r++l+ +ns+ws+p+s+daig+++evel+ +  ++ vy 
  EPX71146.1 2131 HIEIFSPYVVINKTRTPLAIGPKSEYKKFAFSSVKLsEgSNDQAIPCLFSYWKNHGSRRCRLQSNNSQWSEPISFDAIGSVFEVELPHKYLHDLVYk 2227
                  79***************************99966543468999************************************************999999 PP

      SHR-BD   96 iGisveegrgkykltkiVtiaPRyilkNklsekleiaqrgskkvielkpgeliplhwlrnkeekelvirlpesnsqwSggfnisdvgslyvklrrqn 192 
                  +G+ +e+g++ y+ tk+Vtia+R+++ Nk+++ l+ia+++ ++++e++p++  +l++ ++  ++++ ++ +    +wS++f i+++gs+y++l +  
  EPX71146.1 2228 VGVFIETGPNGYSNTKVVTIASRFLIINKTRWMLSIAEPNEEGTMEVQPNQEDFLKYITKATSPMIRVSCN-DFFEWSSPFCIEEIGSIYLRLPT-I 2322
                  ********************************************************************999.5788*****************88.5 PP

      SHR-BD  193 seqvllkveiiledatifikiedaeknewPfsirNeseveilfyqrdpelnsd.....eskplkytlppksvmpYawDePta 269 
                  ++++l++ ei+l+ atifi++ +++   wPf irNe++  + f q ++ +++        ++++++lp++s+++Y+wD+P++
  EPX71146.1 2323 EGERLIRAEITLDRATIFIYFIEENGA-WPFYIRNETNLNFKFSQVNIVDEESkkrsqVIEQKTHNLPSHSEIKYSWDYPSS 2403
                  6668***********************.*****************988777777888866789*****************86 PP

>> VPS13_C  Vacuolar-sorting-associated 13 protein C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  205.2   2.1   2.6e-64   6.7e-61       1     177 [.    2653    2829 ..    2653    2830 .. 0.97
   2 !   10.4   0.2   0.00016      0.41     108     169 ..    2856    2918 ..    2853    2922 .. 0.90

  Alignments for each domain:
  == domain 1  score: 205.2 bits;  conditional E-value: 2.6e-64
     VPS13_C    1 kiYfeklhlqPiklhlsfslsekknkeeslekeqsllslllllnslgvtltniddapikLnalelenvflslesliekikkhYsqqllkqlykilgs 97  
                  k+Yfe l+lqP +lhlsf ++e+ n+ + + ++++++ ++  +n l ++++ni+dap++Lnal+++n+ +sl++l+e + +hY+q++l q++ki+gs
  EPX71146.1 2653 KVYFEILNLQPSQLHLSFVRTERINNANTSVSSHNPFVFF--VNILSMAIGNINDAPVRLNALIMDNAHVSLRRLFELVRNHYEQEMLFQVHKIVGS 2747
                  69************************99888778888888..******************************************************* PP

     VPS13_C   98 ldvlGNPvglfnnissGvkdlfyePiqglvkg..peefgeglakGaksLvkktvfGvadsvskitgsvskglaaltmDeeYq 177 
                  +d+lGNPvglf++i+sG++d+fyeP++g++ +    e+g+g+akG++s+vkkt+fG++d+v+k++g++s+ l+++tmD+++q
  EPX71146.1 2748 ADFLGNPVGLFTTITSGFADIFYEPFHGFIINegSYELGIGFAKGTASFVKKTIFGLTDTVTKLAGTISRSLSVITMDQKFQ 2829
                  ******************************98889**********************************************9 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00016
     VPS13_C  108 fnnissGvkdlfyePiqglvkg.peefgeglakGaksLvkktvfGvadsvskitgsvskglaa 169 
                   + + sG++ l  +P+ g+  +    f++gl kG+    +k ++G++d +s it+ + ++ ++
  EPX71146.1 2856 YTGVRSGLSGLALQPVLGARRNgVPGFMKGLGKGMVGVTTKPLVGLFDFASSITEGARNTTTV 2918
                  578999**************99899*****************************988877665 PP

>> VPS13_mid_rpt  Repeating coiled region of VPS13
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.2       2.5   6.3e+03     136     198 ..     103     166 ..      90     197 .. 0.54
   2 ?    2.7   0.0     0.028        73     180     231 ..     257     307 ..     238     309 .. 0.84
   3 !  197.2   4.6     1e-61   2.6e-58       1     235 []     581     814 ..     581     814 .. 0.98
   4 !    6.6   0.0    0.0018       4.5       7      51 ..    1123    1167 ..    1118    1256 .. 0.79

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 2.5
  VPS13_mid_rpt 136 eedleeleelmYDkfslklsdtqvllgdsgedwkealsedssklhile.pinlkltleksivpk 198
                    +e  +  +++  D f++  ++ +  l d + +++++ +++  ++ i +   nl++++ +  ++ 
     EPX71146.1 103 KESRQAFKQEQLDSFEILRKNFREALDDANTTTTNSKKQSLLEFMIAKlTANLEISVGRVHLHY 166
                    3345566667777777777777777766666655555544233333331234444444444444 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.028
  VPS13_mid_rpt 180 hilepinlkltleksivpkalnlpkfkvsgelpslevnlsdkkykslmelid 231
                    +il+p++++ ++     p+++ + +++ + +++++++ lsd+ + sl+ +id
     EPX71146.1 257 YILKPMTVNGHFVLFRHPDDQ-IMQLRGTLSIDEISFALSDAEFNSLLTMID 307
                    599999999999999999865.56899999********************97 PP

  == domain 3  score: 197.2 bits;  conditional E-value: 1e-61
  VPS13_mid_rpt   1 fetnPldekadqrlsiklrpleiiYdaetveevvkffkppksvlesvealssaasstleelkeqtragleyaleehktldlkidlqapliiiPesi 96 
                    f++  ld+ka + l ++lr+l  +Y++ +ve++++ff p++++le+v+++s +a++++ +l +qtra+l+yale+hkt d+ idlqapli++ +++
     EPX71146.1 581 FDSYSLDSKASSVLLVHLRTLILVYNRTCVERLIEFFLPSRTKLEHVTEWSYSAAAKVMNLARQTRASLDYALEQHKTADMTIDLQAPLIVVRQKC 676
                    67788******************************************************************************************* PP

  VPS13_mid_rpt  97 teeessllvlDlGhlsveselvdksaikeikskskqqyseedleeleelmYDkfslklsdtqvllgdsgedwkealsedssklhilepinlkltle 192
                    ++ +s++l lD+G++  +++lvd++ i++++  +++q+++e +e+l++lmYD+f ++l +t++l++++ +  +++ls + s++h+l++++l++++e
     EPX71146.1 677 SDYDSPTLFLDVGRIVAHTQLVDDQLIEKFRCLQSKQINSELMEQLKNLMYDRFVISLYETRCLIAPNYDVGMSSLSVE-SDYHVLKECSLDISFE 771
                    *****************************************************************************87.99************** PP

  VPS13_mid_rpt 193 ksivpkalnlpkfkvsgelpslevnlsdkkykslmelidtsiP 235
                    +si++ka+nl+kf+v+ ++ s e+ ++d++y+ + +++++ +P
     EPX71146.1 772 ISILQKATNLTKFRVFSHMKSAEIMFTDDQYQVFTNMMSNLLP 814
                    **************************************98877 PP

  == domain 4  score: 6.6 bits;  conditional E-value: 0.0018
  VPS13_mid_rpt    7 dekadqrlsiklrpleiiYdaetveevvkffkppksvlesveals 51  
                     d + d++l+++l p++ ++  e++++++ ff + k+++++++ + 
     EPX71146.1 1123 DLQQDSSLDLSLGPVTLTFVEEYFNSLYGFFMKYKKQKDLYDSVK 1167
                     6788*********************************98866554 PP

>> VPS13  Vacuolar sorting-associated protein 13, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.9   0.0     2e-51   5.1e-48       5     233 ..     147     371 ..     144     374 .. 0.94
   2 ?    3.3   0.2     0.023        59     115     171 ..     755     812 ..     691     814 .. 0.75

  Alignments for each domain:
  == domain 1  score: 163.9 bits;  conditional E-value: 2e-51
       VPS13   5 LiakIldNlqvtiknvHiryeDslsvpgrpfalGitLesLsaqstdenwkptfikgeeseekivyKlvelesLavYwdsdssedksledlsleeleeaf 103
                 +iak + Nl++++  vH++y D+ls  ++pf+lG+tL+sL ++std+++k+ ++ +    e+ ++K + ++ +++Y  +++   +  +++s+ee+ +++
  EPX71146.1 147 MIAKLTANLEISVGRVHLHYDDDLSDCKHPFSLGVTLNSLRLHSTDDDFKDYLLPSDPLPESCIHKYLFVDYVSIYYIDKC---MIPRTCSPEEIFAKL 242
                 89*********************88888**********************999977788999***************9877...3446899******** PP

       VPS13 104 essikeksekakrhqYiLkPvsgeaklklnkkgetdapklkldleldevgltLseeqyrdilklleslsrlerreeyrklrPkvsvkenpraWWkYaik 202
                 +++i++  + + +++YiLkP+++++++ l ++ ++++ +l+  l +de+++ Ls+++++++l ++++++ + r++ y ++rPkvs+k++p aW++Y++ 
  EPX71146.1 243 RQAIPDCIR-SPKFDYILKPMTVNGHFVLFRHPDDQIMQLRGTLSIDEISFALSDAEFNSLLTMIDYFKLMLRQQLYVHFRPKVSPKDDPLAWFRYTAL 340
                 ****98774.688************************************************************************************** PP

       VPS13 203 avleeirekrrkwsweaiaerrdlrkrYvel 233
                 +v ++i++k+++w w+++++rrd+r  Y+++
  EPX71146.1 341 VVKDSIHQKQKQWAWKYFKSRRDDRVLYMDI 371
                 ****************************987 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.023
       VPS13 115 krhqYiLkPvsgeaklkln.kkgetdapklkldleldevgltLseeqyrdilkllesl 171
                 ++   +Lk +s ++ ++++  ++ t+  k+++  ++++ ++ ++++qy+ +++++++l
  EPX71146.1 755 ESDYHVLKECSLDISFEISiLQKATNLTKFRVFSHMKSAEIMFTDDQYQVFTNMMSNL 812
                 4445699******999999733444459**************************9976 PP

>> Chorein_N  N-terminal region of Chorein or VPS13
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.0   0.2   4.4e-38   1.1e-34       1     115 [.       2     115 ..       2     116 .. 0.96

  Alignments for each domain:
  == domain 1  score: 119.0 bits;  conditional E-value: 4.4e-38
   Chorein_N   1 leslvskllnryLgeyvenldrdqlkvslwsGeveLenlkLkkealdklelPfevkegvigklrlkipwsnlkskpvvieiedvyllaeprseseeede 99 
                 le+l++ lln++Lg+yv+nld++ql++++w G+v+L+nl +k+ealdkl++P++++ g+ig+++l++pws+l++k+++++ied+yll++p+ +s +++e
  EPX71146.1   2 LEGLIAGLLNKILGSYVDNLDTKQLNIGVWGGHVSLQNLAIKPEALDKLGVPIKITRGFIGNFNLEMPWSDLQKKSLKVKIEDIYLLIRPQGKS-SFSE 99 
                 799***************************************************************************************9999.6777 PP

   Chorein_N 100 ekeekreqaakkkkLa 115
                 ++ ++++qa k+++L+
  EPX71146.1 100 QELKESRQAFKQEQLD 115
                 779999*******997 PP

>> ATG_C  Autophagy-related protein C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       2.2   5.8e+03      20      60 ..    1617    1657 ..    1616    1680 .. 0.85
   2 !   17.8   0.0   1.2e-06    0.0031       3      83 ..    2836    2916 ..    2834    2926 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 2.2
       ATG_C   20 sslskglksaaqtilavpsevaeskgakgavkavvravPva 60  
                  +++s+++ + + ++ avp ++ e+ + +++  +++  +P+a
  EPX71146.1 1617 KKVSQDVYNFYYALYAVPLKEGEDLKEEEVDDQIFTDIPTA 1657
                  678999*****************999999988999888887 PP

  == domain 2  score: 17.8 bits;  conditional E-value: 1.2e-06
       ATG_C    3 lyasqPedlreGlqqAysslskglksaaqtilavpsevaeskgakgavkavvravPvavlrPligateavsktlqGvrnql 83  
                  ++ ++P  l  G++ + +s+ +g++s  + +   p   a+++g+ g++k++ + +  +  +Pl+g+ + +s++  G+rn+ 
  EPX71146.1 2836 RIRNRPVHLLYGVTAGATSFYTGVRSGLSGLALQPVLGARRNGVPGFMKGLGKGMVGVTTKPLVGLFDFASSITEGARNTT 2916
                  56799999***********************************************************************97 PP

>> bPH_3  Bacterial PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.1   1.8e-05     0.047      19      62 ..    2972    3013 ..    2958    3043 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1.8e-05
       bPH_3   19 ldkpglivvTnkRiifldpkmfggkdfeeipYksIksvdlkkgl 62  
                  +++ +++++T++R+ f+++k  + + ++e+p++++++v+l ++l
  EPX71146.1 2972 IKSQKIVILTDRRVMFVRSK--SLRCSKEFPLRKLQDVELREDL 3013
                  578899**************..679999************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (3060 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       610  (0.0340231); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 1.20u 0.31s 00:00:01.51 Elapsed: 00:00:00.49
# Mc/sec: 18648.12
//
Query:       EPX71147.1  [L=474]
Description: Sds3-like family protein Dep1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-09   37.4   6.8    2.6e-09   37.4   6.8    2.7  2  Sds3      Sds3-like


Domain annotation for each model (and alignments):
>> Sds3  Sds3-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -7.9  11.5         1   1.8e+04     102     166 ..     108     180 ..      20     255 .. 0.57
   2 !   37.4   6.8   1.5e-13   2.6e-09       3     108 ..     293     398 ..     291     469 .. 0.92

  Alignments for each domain:
  == domain 1  score: -7.9 bits;  conditional E-value: 1
        Sds3 102 ekkikrLkeeklllDlanansl.....kktrshta.........g...lanesatstepvelltdrrslrtnsdsdflqels 166
                  ++i   +ee ++ +l++a+++     +   + +a         g   +   ++  t   e +++  s + n++ +  + ls
  EPX71147.1 108 REEITTQNEENEQDNLSEAETVifqeeE---NNNAnqapsihapGtqpN--VNKEAT---EEQSEEFSYK-NNNEGASNGLS 180
                 3444444555555555554444443220...222211122222202110..111111...1122222222.22222222222 PP

  == domain 2  score: 37.4 bits;  conditional E-value: 1.5e-13
        Sds3   3 eklskiessFaelRDklYrerLteLqteltllqqGthpellrklrdleeerDaeLkrlrlreeyqlkriekefkadiekakqeheklvkllkeklyeel 101
                 e+ls ie++Fa lR ++Y +rL +L+ + +l+++  h+++++ ++ + e rD + +r+    ++ql +i++  ++ + + + + +  ++ l++ l +++
  EPX71147.1 293 EALSAIEKEFAVLRNRIYGKRLLKLEEQEELIKNKRHQRFNACVELIVEHRDNRIQRATELLNKQLTSIRNMMNFVYSQRHYQLRFDKRKLRQMLSASV 391
                 89************************************************************************************************* PP

        Sds3 102 ekkikrL 108
                   k +rL
  EPX71147.1 392 AAKFYRL 398
                 ****997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (474 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1760  (0.098165); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.31s 00:00:00.93 Elapsed: 00:00:00.47
# Mc/sec: 3015.09
//
Query:       EPX71148.1  [L=697]
Description: atypical/ABC1/ABC1-C protein kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-24   85.7   0.0    7.5e-22   77.7   0.0    2.8  1  ABC1      ABC1 family


Domain annotation for each model (and alignments):
>> ABC1  ABC1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.7   0.0   4.2e-26   7.5e-22       6     119 .]     262     407 ..     259     407 .. 0.91

  Alignments for each domain:
  == domain 1  score: 77.7 bits;  conditional E-value: 4.2e-26
        ABC1   6 kleeiFaefdeePiAaASiaqVhrAklksge................................eVavKvqrpgvkkriksDlellkllakllkkflkel 72 
                 +++++F++f++ Pi+++SiaqV++A+lk +                                 +VavKv +p+v  +i++Dl++l+l+a  ++ ++   
  EPX71148.1 262 SISDVFEDFQPIPIGVGSIAQVYTANLKHDCalkeqnfsfssnkekimdllsfqrkpiqdlhkKVAVKVLHPNVGLNISLDLKILELFAYFFDLIPTIK 360
                 6899************************63334445677777788889999999999999999***************************999888777 PP

        ABC1  73 rldleelvdefskslleEldferEAknaekfrenfaklkevkvPkvy 119
                  l++ e v+ f + l ++ldf++EA+n  +fr+nf+k ++v++P vy
  EPX71148.1 361 WLSFPEEVKVFGDMLNQQLDFRHEANNLIQFRKNFSKNPYVEFPMVY 407
                 799******************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (697 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       501  (0.0279436); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.27s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 4749.08
//
Query:       EPX71149.1  [L=108]
Description: ribosomal protein subunit L34 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.7e-20   72.7   8.6    2.4e-20   72.2   8.6    1.2  1  Ribosomal_L34  Ribosomal protein L34


Domain annotation for each model (and alignments):
>> Ribosomal_L34  Ribosomal protein L34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.2   8.6   1.3e-24   2.4e-20       1      44 []      65     108 .]      65     108 .] 0.99

  Alignments for each domain:
  == domain 1  score: 72.2 bits;  conditional E-value: 1.3e-24
                    ---S----HHHHHCSSSHHHHHHSHHHHHHHHHHHTTSSS-SCC CS
  Ribosomal_L34   1 mkrtyqPskrkRkrkhGFraRmstknGrkvLkrRraKGRkrLsv 44 
                    m+++yqPs+rkRkrk+GF+aR+++++Grk+L++Rr+KGR +L++
     EPX71149.1  65 MGNEYQPSNRKRKRKFGFLARIRSASGRKILRNRRKKGRMYLTH 108
                    899****************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       282  (0.0157287); expected 358.6 (0.02)
Passed bias filter:                      218  (0.0121591); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.43
# Mc/sec: 751.14
//
Query:       EPX71150.1  [L=222]
Description: zinc finger protein Sap62 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.8e-36  122.0   0.1    1.7e-35  121.3   0.1    1.3  1  SF3A2           Pre-mRNA-splicing factor SF3a complex subunit
    5.7e-07   29.5   0.7    9.4e-07   28.8   0.7    1.3  1  CactinC_cactus  Cactus-binding C-terminus of cactin protein
    5.1e-06   26.7   1.2    9.9e-06   25.8   1.2    1.5  1  zf-met          Zinc-finger of C2H2 type
  ------ inclusion threshold ------
      0.023   14.2   0.5      0.043   13.4   0.5    1.4  1  PRP4            pre-mRNA processing factor 4 (PRP4) like
       0.25   11.7   1.2       0.46   10.8   0.5    1.8  2  zf-C2H2_jaz     Zinc-finger double-stranded RNA-binding


Domain annotation for each model (and alignments):
>> SF3A2  Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.3   0.1   4.7e-39   1.7e-35       1      93 [.     118     209 ..     118     211 .. 0.98

  Alignments for each domain:
  == domain 1  score: 121.3 bits;  conditional E-value: 4.7e-39
       SF3A2   1 igrPgykvtkvrdpeteqvgllvevkypeikeevkPlhrimsaleqkleekpdkkvqyLliaaePYetiafkipskeidksedklwtfwdkdk 93 
                 igrPgyk  k+rdp+t+q gl +++kyp+i+ +vkP++rimsa+eq++e+ pd+k+qyL+iaaePYe++afki+++eid+s +++wt+wd+ +
  EPX71150.1 118 IGRPGYKASKIRDPDTGQFGLRFQLKYPDIQVNVKPRYRIMSAYEQRVEA-PDRKFQYLVIAAEPYESVAFKINAHEIDRSPGRFWTYWDAPT 209
                 8************************************************6.***************************************865 PP

>> CactinC_cactus  Cactus-binding C-terminus of cactin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.8   0.7   2.6e-10   9.4e-07      41     119 ..     136     217 ..     123     221 .. 0.80

  Alignments for each domain:
  == domain 1  score: 28.8 bits;  conditional E-value: 2.6e-10
  CactinC_cactus  41 qgykFnifypdLidkekaptykiekk......teeeetvllrfkagkpYediafrivdkewdlskkrgfkssfergvlqlyfnfk 119
                      g +F+++ypd++  + +p+y+i++       + ++++  l + a +pYe +af+i  +e d s+   f ++++  +++++f f+
      EPX71150.1 136 FGLRFQLKYPDIQV-NVKPRYRIMSAyeqrveAPDRKFQYL-VIAAEPYESVAFKINAHEIDRSP-GRFWTYWDAPTYTIQFFFN 217
                     589********876.577*****999777754333345555.55669***************999.78999***99999999886 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   1.2   2.8e-09   9.9e-06       1      25 []      54      78 ..      54      78 .. 0.98

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 2.8e-09
      zf-met  1 fyCelCnvtfnsesqlksHlqGKkH 25
                ++C lC +++ +e+++ +H qGK H
  EPX71150.1 54 YECRLCLTMHANENSYLTHTQGKAH 78
                79**********************9 PP

>> PRP4  pre-mRNA processing factor 4 (PRP4) like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.5   1.2e-05     0.043      17      29 .]      21      33 ..      21      33 .. 0.97

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1.2e-05
        PRP4 17 EthadRreRLrkL 29
                Et+a+RreRL+kL
  EPX71150.1 21 ETNAARRERLKKL 33
                9**********98 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       1.4     5e+03      13      21 ..      43      51 ..      42      51 .. 0.74
   2 ?   10.8   0.5   0.00013      0.46       2      27 .]      54      79 ..      53      79 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 1.4
                 SHHHHHCCT CS
  zf-C2H2_jaz 13 senaldnHl 21
                 + + ++nHl
   EPX71150.1 43 DPYFMKNHL 51
                 667799996 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00013
                 CBBTTTTBBBSSHHHHHCCTTSHHHH CS
  zf-C2H2_jaz  2 fYCvlCdKyFksenaldnHlkSKkHK 27
                 ++C lC  +  +en++ +H  +K+H+
   EPX71150.1 54 YECRLCLTMHANENSYLTHTQGKAHQ 79
                 56666667778**************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       441  (0.024597); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 1541.87
//
Query:       EPX71151.1  [L=119]
Description: hypothetical protein SOCG_01369 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       374  (0.0208601); expected 358.6 (0.02)
Passed bias filter:                      206  (0.0114898); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.27s 00:00:00.64 Elapsed: 00:00:00.42
# Mc/sec: 841.77
//
Query:       EPX71152.1  [L=301]
Description: actin binding methyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.8e-15   55.3   0.0    3.1e-14   53.5   0.0    1.9  2  Methyltransf_12  Methyltransferase domain
    2.5e-13   50.5   0.0    7.1e-13   49.1   0.0    1.7  2  Methyltransf_25  Methyltransferase domain
    7.2e-13   48.7   0.0    1.1e-12   48.0   0.0    1.2  1  Methyltransf_23  Methyltransferase domain
    2.5e-12   47.3   0.0      6e-12   46.1   0.0    1.7  2  Methyltransf_11  Methyltransferase domain
    6.7e-06   25.5   0.0      0.052   12.7   0.0    2.2  2  NNMT_PNMT_TEMT   NNMT/PNMT/TEMT family
    6.7e-06   26.0   0.0    3.7e-05   23.6   0.0    2.1  1  Methyltransf_31  Methyltransferase domain
    2.6e-05   23.7   0.0    4.6e-05   22.9   0.0    1.4  1  Ubie_methyltran  ubiE/COQ5 methyltransferase family
    0.00091   20.2   0.0      0.002   19.1   0.0    1.6  1  Methyltransf_24  Methyltransferase domain
      0.002   18.0   0.1       0.18   11.6   0.0    2.9  2  Methyltransf_8   Hypothetical methyltransferase
  ------ inclusion threshold ------
      0.053   13.1   0.0      0.099   12.2   0.0    1.4  1  MTS              Methyltransferase small domain
      0.098   12.3   0.0        2.5    7.7   0.0    2.7  2  TPMT             Thiopurine S-methyltransferase (TPMT)
       0.19   12.8   2.6        2.1    9.4   0.1    2.6  2  DUF3298          Protein of unknown function (DUF3298)


Domain annotation for each model (and alignments):
>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       3.2   4.8e+03      29      50 ..      43      64 ..      21      79 .. 0.63
   2 !   53.5   0.0   2.1e-17   3.1e-14       1      99 []     115     218 ..     115     218 .. 0.92

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 3.2
  Methyltransf_12 29 spsaiedakeklakrennnnnn 50
                     +++ ++ a++++a++++n ++n
       EPX71152.1 43 DAEHLTMAEKRIAEQKENPVAN 64
                     4455555666666666655554 PP

  == domain 2  score: 53.5 bits;  conditional E-value: 2.1e-17
  Methyltransf_12   1 LeiGcGtGsllrallekl..pdieytgvDispsai.edakeklakrennnnnnvelealdlldldggssfDlvvasnvlhhl..kdirevldni 89 
                      Le+GcG G+++ ++l+++  ++++++ vD+s++ai +  ++ l + +  ++++++l    l +  +++s D++++++++++l  +++++++dn+
       EPX71152.1 115 LEVGCGAGNTIWPILAENknKELKVYPVDYSKKAIdVVYQNPLYDPNHCHASVWDLAGPTLPEGLSENSADAITLIFCFSALspDQWDQAVDNL 208
                      8*****************9999*************77777778888888888888888888888888****************99999****** PP

  Methyltransf_12  90 rklLkpgGrl 99 
                      +++LkpgG++
       EPX71152.1 209 YRVLKPGGVI 218
                      ********86 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       4.9   7.4e+03      25      44 ..      38      57 ..      22      75 .. 0.66
   2 !   49.1   0.0   4.7e-16   7.1e-13       2      97 .]     115     216 ..     114     216 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 4.9
                     EEEESSHHHHHHHHHHHHHT CS
  Methyltransf_25 25 tgvDiseemleaareraeee 44
                       v+ ++e l  a++r++e+
       EPX71152.1 38 DHVEWDAEHLTMAEKRIAEQ 57
                     44566667777777777664 PP

  == domain 2  score: 49.1 bits;  conditional E-value: 4.7e-16
                      EEET-TTSHHHHHHHCTS.T.SSEEEEEESSHHHHHHHHHHHHHTTTTEEEEESBC..CGBS..SSTTTEEEEEEESTGGGSSHHHHHHHHHHH CS
  Methyltransf_25   2 LdlGcGtGrltlalakrl.g.kakvtgvDiseemleaareraeeeglnvefvqgda..edlp..fedgsfDlvvssgalhhlsdedlekalkei 89 
                      L++GcG G+++  ++++  + + kv+ vD+s+++++ + ++   +  +++  + d+   +lp  + ++s D+++++++++ ls++++++a++++
       EPX71152.1 115 LEVGCGAGNTIWPILAENkNkELKVYPVDYSKKAIDVVYQNPLYDPNHCHASVWDLagPTLPegLSENSADAITLIFCFSALSPDQWDQAVDNL 208
                      9********9999888875369****************999977655888888888446688555999************************** PP

                      HHHEEEEE CS
  Methyltransf_25  90 arvLkpgG 97 
                      +rvLkpgG
       EPX71152.1 209 YRVLKPGG 216
                      *******9 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.0   0.0   7.7e-16   1.1e-12      11     155 ..     100     264 ..      85     267 .. 0.79

  Alignments for each domain:
  == domain 1  score: 48.0 bits;  conditional E-value: 7.7e-16
  Methyltransf_23  11 dklerllpklraggrvLdiGcGtG.illevlren.gf..svtgvDlspeaveiae.kakkaqkdqfdeqeaae..........pqgkfdlIvlr 89 
                      d+l+ l++ +  ++ +L++GcG G +  ++l+en  +  +v+ vD s +a++ +  ++   +++++   + ++          ++++ d I+l+
       EPX71152.1 100 DLLQ-LVQPDIGRKVLLEVGCGAGnTIWPILAENkNKelKVYPVDYSKKAIDVVYqNPLYDPNHCH--ASVWDlagptlpeglSENSADAITLI 190
                      4444.66779999***********544555555523356********9999987667777777777..444445666665555566******** PP

  Methyltransf_23  90 evlehvp.d.ppellrqiatllkpgGylllseplasl......kedrllldwlylvpagrhisffsarslkell 155
                      +++  +  d +  +++++++ lkpgG+++++++++ +      k +r l+++ y++ +g+ +++   +++ +++
       EPX71152.1 191 FCFSALSpDqWDQAVDNLYRVLKPGGVIFFRDYGRLDltqlraKKNRYLDENFYIRGDGTRVYYLENDEIQKIF 264
                      ******9637***********************9988888887788888889999999999999999*999987 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       8.5   1.3e+04      27      37 ..      43      53 ..      29      67 .. 0.56
   2 !   46.1   0.0     4e-15     6e-12       1      96 []     115     220 ..     115     220 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 8.5
                     -HHHHHHHHHH CS
  Methyltransf_11 27 skemlklakek 37
                     ++e l++a+++
       EPX71152.1 43 DAEHLTMAEKR 53
                     33334444444 PP

  == domain 2  score: 46.1 bits;  conditional E-value: 4e-15
                      EEET-TTSHHHHHHH..HTT...SEEEEEES-HHHHHHHHHHCCHHT-EEEETTEECC..CTS..S-TT-EEEEEEES-CCC-..CCHHHHHHH CS
  Methyltransf_11   1 LdvGcGtGrlaeala..krg...arvvgvDlskemlklakekaseeglkvefvvadae..klp..fednsfDlvvssevlhhv..edpekalke 83 
                      L+vGcG+G    ++   +      +v+ vD+sk++++++ ++   +++++   v d+   +lp  + +ns D++++ +++  +  +++++a+++
       EPX71152.1 115 LEVGCGAGNTIWPILaeN-KnkeLKVYPVDYSKKAIDVVYQNPLYDPNHCHASVWDLAgpTLPegLSENSADAITLIFCFSALspDQWDQAVDN 207
                      89*****99987777551.24689***************88888888765555556554468778*******************99******** PP

                      HHHHEEEEEEEEE CS
  Methyltransf_11  84 iaRvLkpgGllvi 96 
                      ++RvLkpgG++++
       EPX71152.1 208 LYRVLKPGGVIFF 220
                      **********987 PP

>> NNMT_PNMT_TEMT  NNMT/PNMT/TEMT family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   0.0   3.5e-05     0.052       7      95 ..      63     152 ..      56     155 .. 0.74
   2 !   10.7   0.0   0.00015      0.22     158     196 ..     183     219 ..     171     238 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 3.5e-05
                     HHHHHHHHCB-HHHHHHHHCSTTTTSTC.CCCHHHHHHHHHHHHHHTS.SS-ECEEEEE..T-TT--GGGTTGGGTEC.EEEEEESSHHHHHHH CS
  NNMT_PNMT_TEMT   7 lakeeyvkkFepraYLekyykkasedaa.eeqvvlfaLknllqtlatg.ekkgdtllDi..GaGPTvyqllsarevak.eitlsDyldqNrdeL 95 
                     ++keey++  +p++Y + +y+k++++   ++  +    + llq ++++ ++  ++ll++  GaG T++ +l+  ++ + +++  Dy+++  d+ 
      EPX71152.1  63 ANKEEYME--NPNQYWDRFYEKNEGNFFmNRRWIAQEFPDLLQLVQPDiGR--KVLLEVgcGAGNTIWPILAENKNKElKVYPVDYSKKAIDVV 152
                     55666665..7*************99874666889999*******987345..555555227999***99986554433788889998877765 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00015
                     .EEEEEEESSHHHH-SSHHHHHHHHHHHHTTEEEEEEEE CS
  NNMT_PNMT_TEMT 158 kadvvvtifcleaacedleeylralrnlasllkpGGhlv 196
                      ad++  ifc+ a ++d  ++ +a++nl ++lkpGG++ 
      EPX71152.1 183 SADAITLIFCFSALSPD--QWDQAVDNLYRVLKPGGVIF 219
                     589********999986..899**************875 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   0.0   2.5e-08   3.7e-05       5     126 ..     112     235 ..     110     267 .. 0.70

  Alignments for each domain:
  == domain 1  score: 23.6 bits;  conditional E-value: 2.5e-08
  Methyltransf_31   5 lrvlDlGCGtGeltf.elaeelgpkaevvGiDiseeaielArenaqklgld..nveFeqgdiee..leklledekfDl...ilsnevlnaladp 90 
                      +++l++GCG+G+ +   lae+ +++ +v+ +D+s++ai +  +n     +d   ++ ++ d     l++ l++++ D    i+++++l   +d+
       EPX71152.1 112 KVLLEVGCGAGNTIWpILAENKNKELKVYPVDYSKKAIDVVYQN---PLYDpnHCHASVWDLAGptLPEGLSENSADAitlIFCFSAL--SPDQ 200
                      5789*******8765278889999999****************7...44553366666666655445544555777764447777777..5554 PP

  Methyltransf_31  91 .dkileeiervlkpggilliedprllaelp.akveees 126
                       d++  ++ rvlkpgg++  +d+    +l+  +++++ 
       EPX71152.1 201 wDQAVDNLYRVLKPGGVIFFRDYG---RLDlTQLRAKK 235
                      38999**************99988...33333333333 PP

>> Ubie_methyltran  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.0   3.1e-08   4.6e-05      50     165 ..     113     234 ..      89     246 .. 0.78

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 3.1e-08
                      EEEEES-TT-HHHHHH.HHHHHHHHEEEEEES-HHHHHHH.HHHHHHHTSSTEEEEE--TTT-TT..S-T-EEEEEEES-GGG-S.-H.HHHHH CS
  Ubie_methyltran  50 kvlDvagGtgDlafkl.sdsvgekgkvvvlDinenmLkvg.ekklkeegkinieflqanaeeLpf..eddsfDvvtvsfGlrnvt.Dk.lkaLk 137
                       +l+v +G+g+    + +++ +++ kv  +D++++ ++v  ++ l +    +       +  Lp+  +++s D +t+ f +  ++ D+ ++a+ 
       EPX71152.1 113 VLLEVGCGAGNTIWPIlAENKNKELKVYPVDYSKKAIDVVyQNPLYDPNHCHASVWDLAGPTLPEglSENSADAITLIFCFSALSpDQwDQAVD 206
                      4689******988765156677778***********998725557777777777777777788863378***********99985354379*** PP

                      HHHHHEEEEEEEEEEEE----SHHHHHH CS
  Ubie_methyltran 138 eayrvlkpGGrlvvlefskvelpllsqa 165
                      ++yrvlkpGG ++  ++ +  l+ l+  
       EPX71152.1 207 NLYRVLKPGGVIFFRDYGRLDLTQLRAK 234
                      ************9999988888877765 PP

>> Methyltransf_24  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0   1.3e-06     0.002       1     106 []     115     223 ..     115     223 .. 0.87

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 1.3e-06
  Methyltransf_24   1 vEiGvysGvstlwllralrrngagrlvavdhdpgaeeaaalare.......aglddrvrlikadseealaslaagsiDllfiDgghaaeavled 87 
                      +E+G+ +G++   +l+  ++ +  +++ vd  +   +a  ++ +       +  +++++l   +++e l++ +a+ i l+f+    + ++  ++
       EPX71152.1 115 LEVGCGAGNTIWPILAENKNKEL-KVYPVDYSK---KAIDVVYQnplydpnHCHASVWDLAGPTLPEGLSENSADAITLIFCFSALSPDQWDQA 204
                      79*******88888876666665.*********...555555555777787888899999999999*99999999******************* PP

  Methyltransf_24  88 leallprlapggvvlfdDi 106
                      +++l ++l+pggv++f D+
       EPX71152.1 205 VDNLYRVLKPGGVIFFRDY 223
                      ****************997 PP

>> Methyltransf_8  Hypothetical methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.0   0.00012      0.18     118     155 ..     179     219 ..      59     223 .. 0.76
   2 ?    0.8   0.1      0.24   3.6e+02       9      49 ..     230     269 ..     225     286 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00012
                     --TT-EEEE..EEES---S.S-HHHHHHHHHHHEEEEEEEE CS
  Methyltransf_8 118 ledesvdva..vfclslmg.tnladflkeanrvlkvGGllk 155
                     l ++s+d +  +fc+s ++ +++ + + + +rvlk+GG+++
      EPX71152.1 179 LSENSADAItlIFCFSALSpDQWDQAVDNLYRVLKPGGVIF 219
                     566777753339***9776267999*************975 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.24
                     HHHHHHHHHHHHHHHH.S-HHHHHHHHHH-HHHHHHHHHHHH CS
  Methyltransf_8   9 rldgarfrflneklyt.gesskavdlfkedpeafdlyhkgfr 49 
                     +l + + r+l+e++y  g++++   l  e+ e+ +++   f+
      EPX71152.1 230 QLRAKKNRYLDENFYIrGDGTRVYYL--ENDEIQKIFGSKFE 269
                     6888999*******952555555555..88888888877775 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   6.6e-05     0.099      23      74 ..     101     155 ..      97     189 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 6.6e-05
                 HHHHCHCCTCSE.EEEET-TTSHHHHHHHHH..TTC.EEEEEESBHHHHHHHHHH CS
         MTS  23 Lletlpkelsgk.vlDlGcGaGvlgaalake..speaevtlvdvdarAlesaken 74 
                 Ll+ ++ ++ +k +l +GcGaG     +++e  ++e++v  vd +++A+++  +n
  EPX71152.1 101 LLQLVQPDIGRKvLLEVGCGAGNTIWPILAEnkNKELKVYPVDYSKKAIDVVYQN 155
                 566677776666268*******87665555500555668889*******998877 PP

>> TPMT  Thiopurine S-methyltransferase (TPMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.0    0.0017       2.5       5     152 ..      75     219 ..      71     222 .. 0.64
   2 ?    0.0   0.0      0.37   5.6e+02     168     202 ..     253     286 ..     249     297 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0017
                 HHHHHHHTT--TT--SS..--HHHHHHHHT.T-S--EEEEEE.T-TT-HHHH.HH-B...TTEEEEEE-S-HHHHHHHHHHHTTSGGGGGEEEE--... CS
        TPMT   5 fWekrweeeqipfhqee..vnpllkkfldalkakaglrvlvP.lCGkaldlv.wlAe...qgrevvGvelselAvekffeeanlepkvkelsgvkeysa 96 
                  W+  +e+++ +f  ++  + + +  +l+  +   g +vl+  +CG +  +   lAe   ++ +v  v+ s++A+   +++  + p+    + v     
  EPX71152.1  75 YWDRFYEKNEGNFFMNRrwIAQEFPDLLQLVQPDIGRKVLLEvGCGAGNTIWpILAEnknKELKVYPVDYSKKAIDVVYQNPLYDPNHC-HASVWD--L 170
                 56666666666665443225566666666666667777776437888876642477522256789999999999998776666655543.333333..3 PP

                 ........-TTT---SS-..EEEEEEESSTTTS-GGGHHHHHHHHHHHEEEEEE.. CS
        TPMT  97 geiellcgdvFtlraeelgkfdliydraalvAlppelreryakslaelLkpdgegl 152
                 ++ +l  g    l++++   ++li+    + Al p+ +++ +++l+++Lkp+g ++
  EPX71152.1 171 AGPTLPEG----LSENSADAITLIF---CFSALSPDQWDQAVDNLYRVLKPGGVIF 219
                 44455544....5555555567776...7889999999999999999999998876 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.37
                 ----HHHHHHHHGGTEEEEEEEETT--TT...... CS
        TPMT 168 fsvpeaeleallsagfkvaeleeedaleeevrkka 202
                 ++++++e++++++ +f++ +      l   +rkk+
  EPX71152.1 253 YYLENDEIQKIFGSKFEICQNGVDKRLIV-NRKKK 286
                 788999***********998877555555.24443 PP

>> DUF3298  Protein of unknown function (DUF3298)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.3       0.2     3e+02      19      55 ..      51      90 ..      30      95 .. 0.67
   2 ?    9.4   0.1    0.0014       2.1      27      63 ..     201     254 ..     177     261 .. 0.77

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.2
                HHHHHHHTCH-..TTS-HCCCCTT...TTTSS-TTTSSEEEE CS
     DUF3298 19 keqikkenekq..qedeyaglper...rdkedilgyqnfylt 55
                +++i +++e++  +++ey +   +   +d  + +++ nf+++
  EPX71152.1 51 EKRIAEQKENPvaNKEEYMEN--PnqyWDRFYEKNEGNFFMN 90
                566655554330033344444..2558888888888888876 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.0014
                 CH-TTS-HCCCCTT.................TTTSS-TTTSSEEEETTEEEEEE CS
     DUF3298  27 ekqqedeyaglper.................rdkedilgyqnfyltddglviyf 63 
                 ++q  d++  + ++                 r+k++ + ++nfy+  dg  +y+
  EPX71152.1 201 WDQAVDNLYRVLKPggviffrdygrldltqlRAKKNRYLDENFYIRGDGTRVYY 254
                 55565566666666777777777788888889999***************7777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (301 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       640  (0.0356964); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 2054.05
//
Query:       EPX71153.1  [L=437]
Description: ornithine aminotransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   1.9e-116  389.1   0.0   2.2e-116  388.9   0.0    1.0  1  Aminotran_3  Aminotransferase class-III


Domain annotation for each model (and alignments):
>> Aminotran_3  Aminotransferase class-III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  388.9   0.0  1.2e-120  2.2e-116       2     406 .]      23     420 ..      22     420 .. 0.95

  Alignments for each domain:
  == domain 1  score: 388.9 bits;  conditional E-value: 1.2e-120
                  C-TTB--SCEEEEEEEBTEEEETTS-EEEESSHHHHTTTT-BT-HHHHHHHHHHHTT-S---TTTCEEHHHHHHHHHHHHHCT-..SEEEEESSHHHH CS
  Aminotran_3   2 vareednlllvitkaeGvyltdvdgkrylDlvssiavvnlGhahPkvvkavkeqaaklshvsfgaltnepalklaekllklapkgldkvflansGseA 99 
                  +a+++++l+++ +kaeG+ ++d +gk+ylD++s++++vn+Gh+hPk+v a+ eqa+ +++ s +a+ n++   +a+++++ ++   ++v+ +n+G+eA
   EPX71153.1  23 AAHNYHPLPVCFSKAEGAKVWDPEGKEYLDFLSAYSAVNQGHCHPKIVGALIEQAQRVTLSS-RAFYNDKFGPFAKYVTDYFGY--EMVIPMNTGAEA 117
                  688999999***************************************************99.*********************..************ PP

                  HHHHHHHHHHHHHHTS..HCTT-EEEEETTT---SSHHHHHHSS--TTTTTTCTTB-TSE.EEE-TTBGGGTB-HHHHHHHHHHHHHHHHCHTCCCEE CS
  Aminotran_3 100 vetAlKlarkyarekk..atektkiiafkgafHGrtlgalsvtgskkkyktlfgpflpev.vrlkypdeevlkeneeeeaalleelealekkkkdeva 194
                  vetA Klar + +++k  a++ + i+++ ++fHGrt+g +s++++ ++ ++++gp lp+v ++++ +d +vl +n+      le l+   +     va
   EPX71153.1 118 VETACKLARLWGYKQKkiANNEAIILSCVDNFHGRTMGIISMSTD-PEARDNYGPYLPNVgPKVEGSD-RVLRYNN------LEDLKYFLENYGSRVA 207
                  ***********99999888999999********************.**********999957888887.7778888......5666666699****** PP

                  EEEE-SCETTTTSEB--CCHHHHHHHHHHHHT-EEEEE-TTTTTTTTSSSSGGGGCTS--SEEEE-GGGGTT.SS-EEEEEEHHHHTTS-TTSB--TT CS
  Aminotran_3 195 AvivEpiqgegGvvvaspeflaklrelckkhdvllivDEvqtGfGrTGklfAlehagvspDlmtlaKaltgG.lplsavlataevmqalapgshgsTf 291
                  +++vEpiqge+Gvvv+++++l+ + elck h+vl+i+DEvqtG++rTGk+ ++eh gv+pD+++l+Ka++gG +p+savl  +e+m  ++pg hgsT+
   EPX71153.1 208 GFLVEPIQGEAGVVVPDDDYLRSAYELCKAHNVLFIADEVQTGIARTGKMLCIEHSGVKPDMVILGKAISGGvYPVSAVLSSKEIMLNFEPGTHGSTY 305
                  ************************************************************************************************** PP

                  TT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTT-TTEEEEEEETTEEEEEEBCCCETTC...HHHHHHHHHCTEE-EEETTTEEEE-- CS
  Aminotran_3 292 gGnplacavalavleiieeekllenaqelgaalkegLeelqkkyevikevRgkGlmiaielkeeaevke...keilkkakekGvlilsaGdnvirllp 386
                  gGnpl +avala+l++++ee+l+e+a+ lg++++++L++ ++    ++  Rg+Gl+ ai + e ++ +    ++++  ++  Gvl ++++ n+irl+p
   EPX71153.1 306 GGNPLGAAVALAALQVVKEENLVERAAVLGEKFRNALNDTKSP--ILQVARGRGLLNAIVIDETKT-NGrtaWDLCLIMRSRGVLAKPTHGNIIRLAP 400
                  ***************************************9955..79999******9995544444.44577************************** PP

                  -TT--HHHHHHHHHHHHHHH CS
  Aminotran_3 387 pliitdeeidelleilkkal 406
                  pl+i++e++ +++ei+k+al
   EPX71153.1 401 PLVISEEDLMKGVEIIKQAL 420
                  *****************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (437 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       291  (0.0162307); expected 358.6 (0.02)
Passed bias filter:                      288  (0.0160634); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 3118.76
//
Query:       EPX71154.1  [L=220]
Description: fumarylacetoacetate hydrolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.6e-48  165.3   0.0    1.8e-48  165.1   0.0    1.0  1  FAA_hydrolase  Fumarylacetoacetate (FAA) hydrolase family


Domain annotation for each model (and alignments):
>> FAA_hydrolase  Fumarylacetoacetate (FAA) hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.1   0.0     1e-52   1.8e-48       1     189 [.       7     189 ..       7     215 .. 0.91

  Alignments for each domain:
  == domain 1  score: 165.1 bits;  conditional E-value: 1e-52
                    .EEEEEEE--SHHHHHTTT.-SS-EEEEEEGGGE.EETTE..EE-TT.SSSS-EE......EEEEEEEESS..-B--T--HHHHHTTEEEEEEEEE CS
  FAA_hydrolase   1 kivcdglnyaehvreagkaaeeppdrhiplepvfflkrasslvgpgd.pirrPagsekldyEvELavvigk..plrevlsveeAedaiaGytllnD 93 
                    ki+c+g+nya+h+re++   +++p+     +p fflk++s++v pg+ ++++P+ ++  +yEvEL+++ig   p+r+++s ++ ++aiaGy ++ D
     EPX71154.1   7 KILCIGRNYAAHIRELN---NAVPK-----KPFFFLKPPSAIVEPGKgKLLIPSEVQ-ANYEVELGFIIGSklPARQPISQSRWSEAIAGYFVGID 93 
                    689************96...77888.....777************98459*****88.6************888888899**************** PP

                    EE-SBGGG---..HHHHHHTGGGEEEEEE-B--B-.STT---SS-EEEEEETTEEEEEEEGGGTTTSHHHHHHHHHHHH-B-TT-EEEEEES.... CS
  FAA_hydrolase  94 vsaRdlqaeek.aplgwflgksfdtftpiGpwivtpdeledpedlelrlrvngeevqdsntkdmifspaeliahlsagltLepGdliltGTpsgvg 188
                    v+aR++q e+k   l+w  +k++dtf p+Gp+i ++++++dp+++ ++l+ n++ vq++nt+ m+ +++++++ +++ +tL+pGdliltGTp+gvg
     EPX71154.1  94 VTARNIQSEAKkEGLPWSFSKGYDTFLPVGPFI-PKQQVPDPHNVIVELSKNDKIVQHENTSLMLNNIPKILSSITEAMTLQPGDLILTGTPKGVG 188
                    ***********7777******************.************************************************************97 PP

                    . CS
  FAA_hydrolase 189 a 189
                    +
     EPX71154.1 189 E 189
                    4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       276  (0.0153941); expected 358.6 (0.02)
Passed bias filter:                      267  (0.0148921); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1647.79
//
Query:       EPX71155.1  [L=271]
Description: 5-amino-6-(5-phosphoribosylamino) uracil reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      7e-25   88.0   0.0    8.7e-25   87.7   0.0    1.2  1  RibD_C    RibD C-terminal domain


Domain annotation for each model (and alignments):
>> RibD_C  RibD C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.7   0.0   4.9e-29   8.7e-25       2     199 ..      15     250 ..      14     251 .. 0.79

  Alignments for each domain:
  == domain 1  score: 87.7 bits;  conditional E-value: 4.9e-29
                 EEEEEEEEETTSBSSCTTSSGCT..........SS-HHHHHHHHHHHHTSSEEEEEHHHHHHHT--SS--SSCHSCHH.HTT.GSS-EEEEEETTS-S- CS
      RibD_C   2 yvilklavSlDGklaaaggeskw..........itgeearadvhelraeadailvGrgtvladnpsltvrwvkkreae.adaearqpvrvVvdstlrvp 89 
                 +v l++a+S  Gk+  +  +s            i+++e  +++h lr+  dai+vG++tv+ dnpslt+r++  ++ +   + + qp+ +++ds+l ++
  EPX71155.1  15 HVLLTWAQSMNGKIGYKVPSSYEnphvfrgqlkISSKESFRMTHGLRSLFDAIMVGSNTVRNDNPSLTCRYPCPENSNcLAPVSMQPIPIIIDSHLSLN 113
                 57778888888888777766666677777777799999************************************9998888888*************99 PP

                 TTSH....HHHSS..S-EEEEESSCSCHHHHHHCC..............E.........SE-HHHHHHHHHHTT--EEEEEETHHHHHHHHHTTT-SEE CS
      RibD_C  90 ldak....vltdd..aptlvatteeadkekveklk..............v.........rvdlkelleeLkergirsllveGGatLagsllraglvDel 159
                   +     + +++  ++++v++  ++ ++k ++ +              +         + +    l+eL+ +g  +++veGGatL+ + l+++ +D+l
  EPX71155.1 114 YATLkvmdLARRGltKAPWVVVAPSVLQRKTTDAQlqerwncieycggrIfvrdqehpnNWNDYVSLKELQSNGASRIMVEGGATLLEKALESNSFDSL 212
                 8888999955555545567766666666666555555666676665555166888888876777889******************************** PP

                 EEEEESCE--TTSBCSSSSST-SSEEEEEEEEEEETTEEE CS
      RibD_C 160 rlyiaPkllGgagktlfdgegfkalklklvksealgegvv 199
                 +++iaPk++ +  +t+   ++   l l  +++  +g++++
  EPX71155.1 213 VVTIAPKMFSS-EETVGISYQKY-LDLNHASWIPCGSDIL 250
                 ********988.44433333222.6677777777777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (271 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       296  (0.0165096); expected 358.6 (0.02)
Passed bias filter:                      269  (0.0150036); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.27s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1951.54
//
Query:       EPX71156.1  [L=422]
Description: UB Xdomain protein Ubx4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-16   60.5   0.4    4.6e-16   58.8   0.1    2.2  2  TUG-UBL1  TUG ubiquitin-like domain
     0.0028   17.8   0.0     0.0091   16.2   0.0    1.9  1  UBX       UBX domain
  ------ inclusion threshold ------
        1.2    9.6   5.3         16    6.0   2.5    2.4  2  DUF3391   Domain of unknown function (DUF3391)


Domain annotation for each model (and alignments):
>> TUG-UBL1  TUG ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.8   0.1   7.6e-20   4.6e-16       2      64 ..       7      69 ..       6      70 .. 0.95
   2 ?   -3.5   0.0       2.2   1.3e+04      34      48 ..     307     322 ..     300     325 .. 0.60

  Alignments for each domain:
  == domain 1  score: 58.8 bits;  conditional E-value: 7.6e-20
    TUG-UBL1  2 tynfrrfkvkvtpnttlndvLeeackkfkldds.asytLkhnnkpldlslpfRlsnLpngakLe 64
                +++f++  vk+tp+ +l++v+  +++k+++ ++ ++ +L hn+k+ldls  +R+s+L++g+kL+
  EPX71156.1  7 CKGFQKCPVKLTPSAPLQEVVLASYEKLGF-SDwSRLELFHNDKKLDLSTLMRHSGLSQGSKLT 69
                6789**************************.555*****************************7 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 2.2
    TUG-UBL1  34 s.asytLkhnnkpldl 48 
                 + ++y+L   + +l+l
  EPX71156.1 307 EqDEYDLEPSKSQLEL 322
                 4457777666666655 PP

>> UBX  UBX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   1.5e-06    0.0091       5      49 ..     348     393 ..     344     403 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.5e-06
                 SEEEEEEEETTSTEEEEEEESSSBHHHHHHHHHHHCCCC.CTSEEE CS
         UBX   5 datrlqiRlpdGsrlvrrFkksdtlesvyeyVdsklfek.eepFqL 49 
                 ++++++  + dG+ l ++F+k+d++ ++ ++V+s+l    +++F+L
  EPX71156.1 348 STATVKFDFGDGKPLYHEFSKEDKIPDLHNFVTSHLPNGfPSSFSL 393
                 67899999***************************97541455666 PP

>> DUF3391  Domain of unknown function (DUF3391)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.1      0.01        62      48     119 ..     126     209 ..     107     219 .. 0.66
   2 ?    6.0   2.5    0.0027        16      63     134 ..     221     307 ..     212     308 .. 0.54

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.01
     DUF3391  48 iqeVwidtdksdeeelagl................dvpaaeaaeeakaaeesaeleeekqerperleaereeleraeklyeeakqlvr 119
                 + +V i++++ +e   +++                ++p+++  e++k+    +++  +++++ +r++ e +e +  ++ +++ak++v+
  EPX71156.1 126 VDHVLINGRVYRESDFQQPlllfglhegsvlirliPKPSKPTMESTKP----ERAITSPTSQLNRNSPELPEKTTSMQDFQRAKDFVD 209
                 556666666655555555456666666655555544444444433333....333344445577777777899999999999999986 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.0027
     DUF3391  63 lagldvpaaeaaeeakaaeesaeleeekqerperleaere...........eleraekl....yeeakqlvrslfsdvrlgkaidve 134
                 +++++v++ +  +++k +++  e+ee ++e+p++ +++ +           e +ra  +      + k+++ s++s+++ +k+i+ e
  EPX71156.1 221 TNTSKVEPTTMVPSPKVEPPGMEKEEVISETPKEPSSRVDevepsslqdsqESSRASGIskskGINNKNILGSMMSKIKKEKKIERE 307
                 44445555555555555555555555555544444444443333333333344444333444445668888************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (422 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       953  (0.0531541); expected 358.6 (0.02)
Passed bias filter:                      485  (0.0270511); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.28s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 2958.74
//
Query:       EPX71157.1  [L=123]
Description: DUF953 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.9e-13   48.7   0.0    5.8e-13   48.5   0.0    1.1  1  DUF953         Eukaryotic protein of unknown function (DUF953
  ------ inclusion threshold ------
      0.061   13.7   0.0       0.23   11.8   0.0    1.8  1  Thioredoxin_8  Thioredoxin-like


Domain annotation for each model (and alignments):
>> DUF953  Eukaryotic protein of unknown function (DUF953)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.5   0.0   6.5e-17   5.8e-13      14     104 ..      15     104 ..       5     121 .. 0.81

  Alignments for each domain:
  == domain 1  score: 48.5 bits;  conditional E-value: 6.5e-17
                 H..TSSSEEEEEEB--B-.TTS-BSSHHHHHHHHHHHHHHHH-SS-EEEEEEE---HHHHT-TTSHHHH..TS---SSSEEEEETSS-E..E-H CS
      DUF953  14 elekeskivfilFlgekd.teGesWCPdCvkaepvieealkeapedvklvrvdvGdrevWkdpanpfRkdpklkltgvPtLlrwkgkkr..Lee 104
                 +l+k+ ++ f+ +l++ d ++ + WCP   +a p  ++ + + ++  +lv+v+vG+ ++W++ +n +Rk  k+ + +vPtL r+ ++    L++
  EPX71157.1  15 KLTKG-DTLFVAYLASIDpHTKQPWCPTVRAALPAFNNIF-NSSKKLNLVHVYVGNMPQWRTSENLYRK--KFGISAVPTLGRYYRDAEgnLQN 104
                 45555.78899999999999*******9999999988777.56789***********************..99**********98874323544 PP

>> Thioredoxin_8  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.5e-05      0.23      11      56 ..      37      81 ..      20      90 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.5e-05
                   SSSHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-SS-HHHHHHHGGG CS
  Thioredoxin_8 11 swcppckaftpklkelyeklkkkkkveivyvsldkkeeefekylkk 56
                    wcp  +a +p  ++++++ k k +++ vyv +  +++  e+  +k
     EPX71157.1 37 PWCPTVRAALPAFNNIFNSSK-KLNLVHVYVGNMPQWRTSENLYRK 81
                   6*******************9.688888888888888777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       335  (0.0186848); expected 358.6 (0.02)
Passed bias filter:                      326  (0.0181828); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.28s 00:00:00.68 Elapsed: 00:00:00.44
# Mc/sec: 830.72
//
Query:       EPX71158.1  [L=144]
Description: 40S ribosomal protein S19 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-59  199.9   0.1    1.3e-59  199.8   0.1    1.0  1  Ribosomal_S19e  Ribosomal protein S19e


Domain annotation for each model (and alignments):
>> Ribosomal_S19e  Ribosomal protein S19e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  199.8   0.1   7.5e-64   1.3e-59       1     136 [.       5     140 ..       5     141 .. 0.98

  Alignments for each domain:
  == domain 1  score: 199.8 bits;  conditional E-value: 7.5e-64
                     TSSSHHHHHHHHHS--S---S-SSS-SSSS-SS-S-SS-SSTTTHHHHHHHHHHHTS--TTSGGGGS----SS-SSS-------THHHHHHHHHT CS
  Ribosomal_S19e   1 tvkdVpaeelikalaeeLkksgklevPewadlvKtgsakelapededWfyvRaAsilRkvylrgpvGverlrkvYGgkkrrgvrpshfvkasgsv 95 
                     +vkdV+a+++i+a++++Lk+sgk+  P+w+d+vKtg++kelap+d+dW++vRaA+i+R++ylr++vGv+rl kvYGg+ +rg+rpsh++++sgsv
      EPX71158.1   5 SVKDVDAQKFITAYSAFLKRSGKMATPQWIDIVKTGTHKELAPYDPDWYFVRAAAIARHIYLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSV 99 
                     59********************************************************************************************* PP

                     TSSS--SSS---SS-HHHHHTHHHHH--SS--S--XXXXXX CS
  Ribosomal_S19e  96 irkilqqLeklglvkkekkkgrrltkkGqrlldriaeevak 136
                     +rk++q+Lek+g+++k++++grr++++Gqr+ldria+++++
      EPX71158.1 100 QRKVIQSLEKIGVLEKSDNGGRRISQQGQRDLDRIAYSLLE 140
                     **************999999****************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       300  (0.0167327); expected 358.6 (0.02)
Passed bias filter:                      279  (0.0155614); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 1054.27
//
Query:       EPX71159.1  [L=775]
Description: hypothetical protein SOCG_01377 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.043   14.2   1.8       0.24   11.8   0.1    2.8  3  DUF641          Plant protein of unknown function (DUF641)
       0.13   12.9   3.4        2.3    9.0   0.2    3.6  3  DNA_repr_REX1B  DNA repair REX1-B
          4    7.6   6.6        4.5    7.5   0.2    3.6  3  Fib_alpha       Fibrinogen alpha/beta chain family
        7.2    6.2  10.7        1.8    8.1   0.1    4.5  6  AA_permease_N   Amino acid permease N-terminal


Domain annotation for each model (and alignments):
>> DUF641  Plant protein of unknown function (DUF641)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   5.3e-05      0.24      26     118 ..     284     376 ..     282     384 .. 0.87
   2 ?   -0.1   0.2      0.25   1.1e+03      83     118 ..     433     468 ..     389     493 .. 0.62
   3 ?   -0.9   0.0      0.44     2e+03      45      64 ..     456     475 ..     432     540 .. 0.57

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 5.3e-05
      DUF641  26 qLQeAhsPydpekiqaADkavvseLkklselkrlyrkkqkkkaseaeeseleaeiqe..qrsllktyeitvkkleaelkakdseieeLkekLeea 118
                  +Q+  +P  pe + ++ k vv e  + s + + + + +++ +s   esel+++i+e  + sl +t +  +k+l++  +  +  i  ++++L ++
  EPX71159.1 284 AVQQTVTPSYPEGVASSEKTVVPEYDQRSCITNTFAHLSQEFDS--IESELANKIEEqwKESLHNTNDYFSKELKSLEELSNLRILAIENSLGNL 376
                 5799999******************************8877655..999999999997778999***********99888888888888887665 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.25
      DUF641  83 qrsllktyeitvkkleaelkakdseieeLkekLeea 118
                 + +   + +++v +++ ++++ d+++ eL   L+++
  EPX71159.1 433 RNQTYSSFQVAVAACNGNINNDDEKVRELTPVLDKV 468
                 333445566666666666666666666666666655 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.44
      DUF641  45 avvseLkklselkrlyrkkq 64 
                   v+eL+ + +   +++++ 
  EPX71159.1 456 EKVRELTPVLDKVLRFMNST 475
                 23344444444444444443 PP

>> DNA_repr_REX1B  DNA repair REX1-B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.86   3.8e+03      25      54 ..     119     148 ..     115     159 .. 0.58
   2 ?    9.0   0.2    0.0005       2.3      41      76 ..     312     346 ..     297     368 .. 0.84
   3 ?    2.3   0.1     0.061   2.7e+02      13      72 ..     433     497 ..     427     504 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.86
  DNA_repr_REX1B  25 kaylksgaeeeykqlvkevTeefseiSkev 54 
                     +a+l+ +++ee ++++++v ++ s   +e+
      EPX71159.1 119 EAVLNIKNNEELHKICNDVKTKTSTTYREI 148
                     556666666666666666655554444444 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0005
  DNA_repr_REX1B  41 kevTeefseiSkevleieaaLreeasredlaelirk 76 
                     + +T++f+++S+e  +ie++L ++  +e+++e +++
      EPX71159.1 312 SCITNTFAHLSQEFDSIESELANK-IEEQWKESLHN 346
                     459********************8.88888887765 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.061
  DNA_repr_REX1B  13 RaeiYkefeegfkaylksgaeee.....ykqlvkevTeefseiSkevleieaaLreeasredlae 72 
                     R ++Y+ f+ + +a   + ++ +      + ++ +v + +++  k++++ +++L e+++r+ l++
      EPX71159.1 433 RNQTYSSFQVAVAACNGNINNDDekvreLTPVLDKVLRFMNSTVKDINTKQSSLLEQRKRQYLSR 497
                     89999999999999888666666676667778899999999999999999999999988888876 PP

>> Fib_alpha  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.1      0.12   5.6e+02      77     119 ..     316     359 ..     278     375 .. 0.55
   2 ?    7.5   0.2     0.001       4.5      29     130 ..     385     484 ..     379     486 .. 0.90
   3 ?   -0.7   0.1      0.32   1.4e+03      82     104 ..     520     542 ..     487     552 .. 0.54

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.12
                 HHHHHHHHHHHHCCCHHHHHHHCCH.HHHHHHHHHHHHHHHHHH CS
   Fib_alpha  77 nvikksskeleeeilrlketidaqe.snirvLqnvlesneqkiq 119
                 n++ ++s+e ++  ++l ++i +q  +++++  + +++  ++++
  EPX71159.1 316 NTFAHLSQEFDSIESELANKIEEQWkESLHNTNDYFSKELKSLE 359
                 44444444444333444444444442333222222222222222 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.001
                 CCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Fib_alpha  29 yekdvkkdlekleneleeisnstkeaeelvkeikdslrekqkskkdndnvikksskeleeeilrlketidaqesnirvLqnvlesneqkiqkLeqdidq 127
                 y+  v + l+ +++ + + +++  e ++l +++++ +  + +s++  d v ++  ++ +  ++  + +i++  +++r+L+ vl++  + ++   +di++
  EPX71159.1 385 YDDAVAELLTGVKKAILNTHERAVELRNLAEKLQEDIVGRVESSA--DFVRNQTYSSFQVAVAACNGNINNDDEKVRELTPVLDKVLRFMNSTVKDINT 481
                 677788888889999999999999999999*****9999999999..7888888888888999****************************99999999 PP

                 HHH CS
   Fib_alpha 128 ker 130
                 k++
  EPX71159.1 482 KQS 484
                 986 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.32
                 HHHHHHHCCCHHHHHHHCCHHHH CS
   Fib_alpha  82 sskeleeeilrlketidaqesni 104
                 +++++++e  +++ t+ +q ++i
  EPX71159.1 520 INSNIDTELYEMEPTLADQTQKI 542
                 33333333333333333333333 PP

>> AA_permease_N  Amino acid permease N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.0      0.13     6e+02      37      57 ..      49      69 ..      43      84 .. 0.75
   2 ?    8.1   0.1    0.0004       1.8      35      60 ..      84     109 ..      76     116 .. 0.84
   3 ?   -2.0   0.7      0.58   2.6e+03      20      27 ..     180     187 ..     176     188 .. 0.85
   4 ?    0.7   0.0     0.083   3.7e+02      37      58 ..     231     253 ..     225     262 .. 0.72
   5 ?   -2.3   0.0      0.73   3.3e+03      43      69 ..     562     589 ..     562     590 .. 0.78
   6 ?   -2.1   0.0      0.63   2.8e+03      44      60 ..     589     605 ..     585     611 .. 0.80

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.13
  AA_permease_N 37 lsRPsLaeLHeelkknsalav 57
                    +RP    +H++++k ++++ 
     EPX71159.1 49 HVRPLGTAVHSQFAKATPPLF 69
                   68999999******9877643 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.0004
  AA_permease_N  35 aklsRPsLaeLHeelkknsalaveee 60 
                     k  +Ps  ++H+++kk s+  ++++
     EPX71159.1  84 DKHAKPSFDNIHSKIKKSSHFQIPKS 109
                    68999**************9988776 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 0.58
  AA_permease_N  20 vPkidfYr 27 
                    vP++ +Y+
     EPX71159.1 180 VPNYQYYK 187
                    9******6 PP

  == domain 4  score: 0.7 bits;  conditional E-value: 0.083
  AA_permease_N  37 lsRPsLaeLHeelk.knsalave 58 
                     +RP L+ + + +  +ns+  ++
     EPX71159.1 231 HIRPQLQHIYDSVLhENSKHYAS 253
                    58*******98755499876333 PP

  == domain 5  score: -2.3 bits;  conditional E-value: 0.73
  AA_permease_N  43 aeLHeelk.knsalaveeesedkvengd 69 
                    +eLHe +   +s+++ +++++ +v+++d
     EPX71159.1 562 FELHEAVTgVPSPVTDKKDLNAEVSQSD 589
                    59***99988888888888777777766 PP

  == domain 6  score: -2.1 bits;  conditional E-value: 0.63
  AA_permease_N  44 eLHeelkknsalaveee 60 
                    + H+ +++ s++ v+ +
     EPX71159.1 589 DKHSYVQESSPIKVQRD 605
                    669*******9988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (775 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1323  (0.0737911); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.70u 0.27s 00:00:00.97 Elapsed: 00:00:00.44
# Mc/sec: 5244.46
//
Query:       EPX71160.1  [L=523]
Description: aldehyde dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   5.3e-128  427.4   0.0     6e-128  427.2   0.0    1.0  1  Aldedh    Aldehyde dehydrogenase family


Domain annotation for each model (and alignments):
>> Aldedh  Aldehyde dehydrogenase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  427.2   0.0  3.3e-132    6e-128       7     462 .]       4     468 ..       1     468 [. 0.97

  Alignments for each domain:
  == domain 1  score: 427.2 bits;  conditional E-value: 3.3e-132
                 SEEEEEETTTCEEEEEEE-B-HHHHHHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHTHHHHHHHHHHHH---HHHHHH.HHHHHHHHHHHHHHHH CS
      Aldedh   7 etievinPatgeviakvpaataedvdaavaaAkeafkawaklpaeeRaeiLrkaadlleerkeelaeletletGkplaeara.eveeaidvlryyaela 104
                 ++i +++P +g+ +++v   ++ d+d+ ++ A+ea+k+w+k++++eR++ L ++ + + +++++ ae+ +++tGk+l +a+  e+  +++ ++++ +  
  EPX71160.1   4 KSITCHCPGDGSLLGRVDLHQPGDIDRSIRLAEEAQKSWKKTSFTERKQFLLALKKNILKNQDKYAEIACKDTGKTLVDAAFgEILVTLEKINWTLKNG 102
                 4599*****************************************************************************99**************** PP

                 HH.HSEEEEEEC...TTEEEEEEEEE-SEEEEEE-SSSCCHHHHHHHHHHHHTT-EEEEEE-TTSHHHHHHHHHHHHHT....TS-TTSEEE--SSTCC CS
      Aldedh 105 ek.legevlpss...egklalvrrePlGvvgaItPWNfPlllaawklapalaaGNtvvlKPaeetplsalllaelfeea....glPkgvlnvvtgsgse 195
                 e+ l+ +  p+s   + k+ +v++eP+Gv++a+++WN+Pl+ a++ ++ al aGN++v+K +e t++s+   ++++++     g  ++++++vt    +
  EPX71160.1 103 EQsLRPTKRPTSlltSYKHGYVQYEPIGVIAALVSWNYPLHNALGPIISALFAGNAIVIKGSELTAWSTHQYCQIVRQLleslGHNPELVQCVTC-LPK 200
                 **88888878766889****************************************************988888887766667************.889 PP

                 HHHHHHH-TTESEEEEES-HHHHHHHHHHHHCTTSEEEEEE---EEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHH CS
      Aldedh 196 vgealvehpevdkvsftGstevgrkiakaaaknlkrvtlElGGknplivledaDldkaveaivkgafgnaGQvCiaasrllvqesiydefveklveaak 294
                 v+++l++hp++++++f+Gs++v++ +a++aak+l++++lElGGk+p+i  +d  l+++++ +++g+f +aGQ+Ci ++r++  + iyd+++++l ++++
  EPX71160.1 201 VADYLTSHPGLRHITFIGSQSVAKLVAASAAKQLTPLCLELGGKDPCILNDDHRLEEVLSIVMRGVFQSAGQNCIGIERIIALDTIYDAVIARLYNRIA 299
                 *************************************************************************************************** PP

                 T--BS-TTSTT-SB---SSHHHHHHHHHHHHHHHHTTSEEEE-TT.E.SB-SSSTTEE--EEEES-TTTSHHHHS---SSEEEEEEESSHHHHHHHHHS CS
      Aldedh 295 klkvgdpldedtdvGPliseaqlekvekyveeakeegaklllGge.reeaglekgyfvePtvlanvtpdmriaqeEiFGPVlsvikfkdeeeaieiaNd 392
                  +++g   ++++d+G+++s+++++++e+++++a+++ga+l++Gg+  +++++ +g+++ Pt+l +vt++m+iaqeE+F+P++ v++++d+e+a++iaN 
  EPX71160.1 300 PMRLGMYTEKEVDMGAMVSNNRFDHLEELIQDAVKQGARLVCGGTrYHHPKYPNGFYFLPTLLVDVTNEMKIAQEECFAPIALVFRANDQEHALQIANG 398
                 *********************************************9889************************************************** PP

                 SSEESEEEEE-SBHHHHHHHHHHS-SSEEEESSSST--TTTSEB--CGGGEES-BSHHHHHHHTEEEEEE CS
      Aldedh 393 teyGLaagvftkdleraervaerleaGnvyiNdsttgaaealpfgGvkqSglGreggkegleeytevktv 462
                 t +GL+a+vf+kd + +e+++e+le G+v +Nd  ++   ++pfgG+kqSg+Gr++g egl+ +++ k+v
  EPX71160.1 399 TSFGLGASVFSKDKKVCEYYVENLESGMVAVNDFGAFYLLQMPFGGCKQSGYGRFAGYEGLQGICNSKSV 468
                 **************************************999*************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (523 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       655  (0.036533); expected 358.6 (0.02)
Passed bias filter:                      628  (0.0350271); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.29s 00:00:00.85 Elapsed: 00:00:00.42
# Mc/sec: 3703.22
//
Query:       EPX71161.1  [L=105]
Description: transcription elongation factor complex subunit Spt4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-22   78.8   0.0      3e-22   78.5   0.0    1.1  1  Spt4      Spt4/RpoE2 zinc finger


Domain annotation for each model (and alignments):
>> Spt4  Spt4/RpoE2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.5   0.0   1.7e-26     3e-22       2      77 .]      10      78 ..       9      78 .. 0.97

  Alignments for each domain:
  == domain 1  score: 78.5 bits;  conditional E-value: 1.7e-26
        Spt4  2 rACllCklvktedqFeeegCpnCeilelkgdkekvsectseefeGlvaildpekSwvAkwqrldkkvpglYAlkve 77
                rACl C++v +++ F ++gCpn          ++v++ ts+ feG++a++ p++SwvA+wqr+d+++pg+YA +v+
  EPX71161.1 10 RACLICGVVLPHTVFANKGCPND-------GVDDVETFTSPVFEGIMAMMVPTESWVARWQRIDNFTPGIYATRVQ 78
                9*********************7.......8999***************************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       306  (0.0170673); expected 358.6 (0.02)
Passed bias filter:                      286  (0.0159518); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.41
# Mc/sec: 777.43
//
Query:       EPX71162.1  [L=188]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.3e-12   45.3   0.6    1.5e-11   44.4   0.6    1.3  1  DUF4448   Protein of unknown function (DUF4448)


Domain annotation for each model (and alignments):
>> DUF4448  Protein of unknown function (DUF4448)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.4   0.6   8.5e-16   1.5e-11      29     188 ..      30     173 ..      27     174 .. 0.87

  Alignments for each domain:
  == domain 1  score: 44.4 bits;  conditional E-value: 8.5e-16
     DUF4448  29 tPkegselkvgktYyiTWdprfFdekenekVkihlsyvkestkekglkksffssdwlpnsdGfypltvdeewlkgkkservtivlvslqpdnvkdevei 127
                 tP+ gs++++g tY + W       ++ e  ++ l++ +++         + ss  +p ++ f+ ++vd++wl+++++++++iv+++ + +    ++++
  EPX71162.1  30 TPSSGSRWAAGYTYAVRWKQ-----PAEEFLEVALENDDKNNTV------ITSSGIIPSNQTFWFVKVDKKWLNKQDNKTARIVIAPQNGE----QTKV 113
                 8*****************64.....6778888888887776554......568999*******************9777776666665555....789* PP

     DUF4448 128 kkGpkVsltkkedlkkledkeseegkkaekyalaialPvvvvvlvlgligfvlwnrkkrdi 188
                 + Gp + l++   + +   +++  + ++ ++ lai++ v + + +l+++++++ +r++r+i
  EPX71162.1 114 QVGPEILLSSTFYWMHV-IDKPTFDYNPIDKRLAIGISVGLTCSILLVLLIHISTRETRKI 173
                 *************9766.77789999999*****************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (188 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       637  (0.035529); expected 358.6 (0.02)
Passed bias filter:                      480  (0.0267723); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.27s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1360.90
//
Query:       EPX71163.1  [L=414]
Description: CDC7 protein kinase Spo4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.7e-39  134.7   0.0    4.7e-17   62.2   0.0    3.3  3  Pkinase          Protein kinase domain
    8.7e-13   48.1   0.0    2.7e-09   36.7   0.0    2.4  2  Pkinase_Tyr      Protein tyrosine kinase
    9.8e-05   22.4   0.6    0.00065   19.7   0.0    2.3  3  APH              Phosphotransferase enzyme family
     0.0024   17.1   0.0     0.0072   15.6   0.0    1.7  2  Fructosamin_kin  Fructosamine kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.0   0.00097       4.4       1      22 [.      40      61 ..      40      65 .. 0.90
   2 !   62.2   0.0   1.1e-20   4.7e-17      21     156 ..      86     216 ..      81     228 .. 0.89
   3 !   61.8   0.0   1.4e-20   6.3e-17     154     264 .]     258     403 ..     248     403 .. 0.79

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.00097
                EEEEEEEEEESSEEEEEEEETT CS
     Pkinase  1 yekleklGeGsfGkVykaveke 22
                y++++ +G Gsf++V+kav+++
  EPX71163.1 40 YHVVKLVGAGSFSSVFKAVDRH 61
                78999**************875 PP

  == domain 2  score: 62.2 bits;  conditional E-value: 1.1e-20
                 TTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS.CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHHHHHHHHHHHHHHHHHHHTT CS
     Pkinase  21 ketgkivAvKkikkekakkkkekkvlrEikilkklk.hpnivrlyevfeekdelylvleyveggeladllerkgslseeeakkiakqilegleylHskg 118
                 + +++ vA+K++      +    ++++E+++l++l+ ++ +++++ +++++d++++vl ++++ e+ d++    +++  e+  +++ +l+gl+++ skg
  EPX71163.1  86 RLRQQFVAIKRVYATVLPS----RIQTELEMLHELRgSECVLNMITAVRHQDQVLIVLPFIQHAEFRDFYM---KYTLPEIAIYLQDLLKGLAHIASKG 177
                 5678999999999887766....578**********9*********************************6...59999999***************** PP

                 EE-SS-SGGGEEEE.TTTEEEE-SGTTSEESSSSCSBCT CS
     Pkinase 119 iiHrDlKpeNiLid.ekgelKitDFGlakelesssklts 156
                 iiHrD+Kp N+  +  ++   i DFGla+    +++ ++
  EPX71163.1 178 IIHRDIKPGNFAWNpYTQRGVILDFGLAQWQVADTPSEN 216
                 **************8888899*******98777665444 PP

  == domain 3  score: 61.8 bits;  conditional E-value: 1.4e-20
                 BCTTTSCGGGS-HHHHTTSCB.SHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCT....SHH...HHHTTS.............. CS
     Pkinase 154 ltsfvgtseYlAPEvlkeney.skkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilg....etkeklpeasei.............. 233
                   ++ gt+ ++APEvl + +y ++ +D+Ws+Gvil+++lt++ pf   +++ ++  el +++   ++ +    +                         
  EPX71163.1 258 RADRAGTRGFRAPEVLFRCQYqTSIIDIWSVGVILLCFLTRRYPFFRCEDDIDAIVELAHIFGRNQMSRcallH----------Gqiwsdnlttvqdqk 346
                 67889***********666665999*********************6666555555555544444443333331..........122333356667778 PP

                 ..........................-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 234 ..........................seeakdllkkllkkdpkkRltaeellqhpyl 264
                                              ++dll+kll+ +p+kRl+ae +l+h+++
  EPX71163.1 347 hswldligsitksdenslldvspgceVALVIDLLDKLLELQPSKRLSAEAALEHDFF 403
                 899999***************999988889*************************98 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.7   0.0   6.1e-13   2.7e-09       5     152 ..      44     207 ..      40     218 .. 0.82
   2 !    8.9   0.0   0.00019      0.84     161     199 ..     257     296 ..     245     324 .. 0.80

  Alignments for each domain:
  == domain 1  score: 36.7 bits;  conditional E-value: 6.1e-13
                  EEEEEESSEEEEEEEEET......................TTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS.-BTTB--EEEEEESSSSEEEE CS
  Pkinase_Tyr   5 kklGeGafGkVvegtlkg......................ekekkevkVavKtlkeeateeekeelleeakimkkl.khpnivkllgvctkeeplliv 79 
                  k +G+G+f++V+++  ++                       k+ +++ Va+K + ++   +   ++ +e++++++l   + +++++ ++ +++++liv
   EPX71163.1  44 KLVGAGSFSSVFKAVDRHfdsydnsywitsqienqnglekGKRLRQQFVAIKRVYATVLPS---RIQTELEMLHELrGSECVLNMITAVRHQDQVLIV 138
                  556777777777776666666667777777776666665455667788*****97777766...899*********88999***************** PP

                  EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE.TTEEEE-STTTHEE CS
  Pkinase_Tyr  80 teyvkgGdLlkfLrkkekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse.nkvvkisDfGLard 152
                  + ++++ ++++f  k      tl ++  + +++ kG+++++sk ++Hrd+   N   +  ++   i DfGLa+ 
   EPX71163.1 139 LPFIQHAEFRDFYMKY-----TLPEIAIYLQDLLKGLAHIASKGIIHRDIKPGNFAWNPyTQRGVILDFGLAQW 207
                  ************8876.....99*******************************99886455677999999975 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00019
                  ETTSSTSGGGGS-HHHHHHSEEEHH.HHHHHHHHHHHHHH CS
  Pkinase_Tyr 161 kkeeaklpvkWmapEslkekkftsk.sDvWsfGvllwEif 199
                  k+ ++     + apE+l++++++++  D+Ws Gv+l   +
   EPX71163.1 257 KRADRAGTRGFRAPEVLFRCQYQTSiIDIWSVGVILLCFL 296
                  555555666789*********876537*******997555 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0       0.1   4.6e+02      24     103 ..      94     168 ..      73     174 .. 0.69
   2 !   19.7   0.0   1.4e-07   0.00065     161     199 ..     171     208 ..     143     213 .. 0.77
   3 ?   -2.7   0.0         1   4.6e+03     135     178 ..     299     339 ..     296     348 .. 0.73

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.1
                 EEEEE-TTS-HHHHHHHHHHHHHHHHTT-B--B-CTTBS-EEETTEEEEEEE----EE-SS..HHHHHHHHHHHHHHHHHHC CS
         APH  24 vlrrnpparaaeeirrevallrlLakagvpvPevlagdtddeeigllfalieyvpgrsllr..klsaaqlpellealgefla 103
                 + r++++  ++ +i+ e+++l+ L++++  v  ++       ++  +  +++++  + +++  +     lpe++  l ++l+
  EPX71163.1  94 IKRVYATV-LPSRIQTELEMLHELRGSEC-VLNMIT---AVRHQDQVLIVLPFIQHAEFRDfyM--KYTLPEIAIYLQDLLK 168
                 46889999.9999************9987.555554...5555666666777776666666431..3355555555555555 PP

  == domain 2  score: 19.7 bits;  conditional E-value: 1.4e-07
                 -SSS-EEEE-SS-SGGGEEEC...TTEEEEE---TT-EEE CS
         APH 161 pgelptvllHgDlhpgNllvd.pddgrvtGviDfedaglg 199
                 +   +++++H+D++pgN+ ++  ++  v  ++Df++a + 
  EPX71163.1 171 AHIASKGIIHRDIKPGNFAWNpYTQRGV--ILDFGLAQWQ 208
                 224689***************7666677..9******985 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 1
                 CCCGCCTCCHHHHHHHHHHHHHHHH--SSS-EEEE-SS-SGGGE CS
         APH 135 rllaselldlleeleeqvlaalaallpgelptvllHgDlhpgNl 178
                 r++  +++d++ ++ e ++  + ++    ++  llHg + ++Nl
  EPX71163.1 299 RYPFFRCEDDIDAIVE-LAHIFGRNQM--SRCALLHGQIWSDNL 339
                 5666666666666777.7777778888..688999999999998 PP

>> Fructosamin_kin  Fructosamine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.34   1.5e+03      41      95 ..      88     143 ..      56     152 .. 0.65
   2 !   15.6   0.0   1.6e-06    0.0072     168     209 ..     307     348 ..     290     353 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.34
  Fructosamin_kin  41 qrfFvklne...kealemFeaEaesLealaetqtirvPkvlavGelkdasfLvleyLe 95 
                      ++ Fv +++   +   +  ++E e L++l+ ++++   +++++  ++d+  +vl +++
       EPX71163.1  88 RQQFVAIKRvyaTVLPSRIQTELEMLHELRGSECV--LNMITAVRHQDQVLIVLPFIQ 143
                      56677666655334446678888888888777664..467777777777777777776 PP

  == domain 2  score: 15.6 bits;  conditional E-value: 1.6e-06
  Fructosamin_kin 168 akieelvervaellskhqpkpsllHGdLWsgNaaltkdgepv 209
                      ++i+++ve  + + +++ ++ +llHG +Ws+N+++++d+++ 
       EPX71163.1 307 DDIDAIVELAHIFGRNQMSRCALLHGQIWSDNLTTVQDQKHS 348
                      578899999888999999*****************9998665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (414 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       458  (0.0255452); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 2912.47
//
Query:       EPX71164.1  [L=103]
Description: SBDS family protein Rtc3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.3e-20   70.5   0.1    1.1e-19   70.2   0.1    1.0  1  SBDS      Shwachman-Bodian-Diamond syndrome (SBDS) protein


Domain annotation for each model (and alignments):
>> SBDS  Shwachman-Bodian-Diamond syndrome (SBDS) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.2   0.1   6.3e-24   1.1e-19       1      85 [.       7      96 ..       7      98 .. 0.90

  Alignments for each domain:
  == domain 1  score: 70.2 bits;  conditional E-value: 6.3e-24
                T-EEEEEEETTEEEEEEE.-HHHHHHHHCTT---HHHHBSSSS-EEETTTT.....EE--HHHHHHHHS---HHHHHHHHHHHSEEE--HH CS
        SBDS  1 nvsivrykkgkkrFeiav.yknklleyregkeidLsevlqsekiFtnaskG.....etaskselekafgteskdeiikeILkkGeiqvsae 85
                n++ v y+ +  +F+i+  ++++++++r++k+i+L+ev++s++iF+  +kG      +ask ele+afgt+++ +++ +IL +G+i  + +
  EPX71164.1  7 NQTRVYYQTDVASFVIIAaSEKDVNNWRSDKTIPLTEVVDSFQIFSL-NKGsegelAKASKLELENAFGTSKDVDVCSKILSEGKITPHRQ 96
                68899****9999*99999**************************76.44445599999**************************998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       417  (0.0232584); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.24s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 803.95
//
Query:       EPX71165.1  [L=1107]
Description: C2 domain-containing protein Git1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     0.0033   17.7   0.6     0.0061   16.8   0.2    1.7  2  C2              C2 domain
  ------ inclusion threshold ------
      0.071   13.3   0.5        1.8    8.7   0.0    3.0  2  Membr_traf_MHD  Munc13 (mammalian uncoordinated) homology dom


Domain annotation for each model (and alignments):
>> C2  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       1.9   1.7e+04      47      62 ..     737     751 ..     730     759 .. 0.60
   2 !   16.8   0.2   6.8e-07    0.0061       3     102 ..     772     893 ..     770     894 .. 0.67

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 1.9
                 SEEEEEEEEEESCHTT CS
          C2  47 PvWnekftfevaelee 62 
                   ++++++f+v+e e+
  EPX71165.1 737 KHYDKQISFQVYE-ES 751
                 4566666777666.43 PP

  == domain 2  score: 16.8 bits;  conditional E-value: 6.8e-07
                 EEEEEEEEESSSSSSTTSS....................CEEEEEEEE.ECEEEEEE-SCSSSSSSEEEEEEEEEESCHTTSEEEEEEEEECSSSTEEE CS
          C2   3 levtvieAknLpnkdkkgs....................sdpyvkvsl.dgkqkakTrviknslnPvWnekftfevaeleeakLeveVfdndrlskddf 80 
                 l+ +vie k Lp k kk+                      + yv+++  +++  ++T  +++ + P+W+e++++ ++  ++ kL++   ++++ +++++
  EPX71165.1 772 LDHKVIEEKSLPYKHKKSMkcklvfsvlaahiivpmdapLEFYVVLQDeKSEFSKQTISVRDAILPTWKEMMELVIEGRKRYKLTLFQRNYET-GSKEI 869
                 56666666666666443334555555555556666555589999999933333334444599988*********9999555555555555666.9999* PP

                 EEEEEEEGHH..HHTTHHHHEEEE CS
          C2  81 iGkveiplst..llsgeeaegwyp 102
                  G+v+++++   +++++e++ w++
  EPX71165.1 870 YGHVTVEIDPekFKKDHEKTLWVD 893
                 ******999977888888888876 PP

>> Membr_traf_MHD  Munc13 (mammalian uncoordinated) homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.1     0.045   4.1e+02      24      52 ..    1005    1033 ..     974    1039 .. 0.72
   2 ?    8.7   0.0    0.0002       1.8      92     139 ..    1040    1087 ..    1033    1091 .. 0.93

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.045
  Membr_traf_MHD   24 tvLkrvlkelWkvvlnalekllLPplsda 52  
                      + L  +l +lW  +l+ +  +l P +s++
      EPX71165.1 1005 KSLFILLSRLWFNILEIIRDILIPVTSKS 1033
                      33445688***************998875 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0002
  Membr_traf_MHD   92 sLtpkevevleaaLdtlkdfFhagGeGlkkeaLkseelqsLllalslY 139 
                      +L  ke +++ ++L+   +fF +    ++ ++L ++e++s +   ++Y
      EPX71165.1 1040 PLNRKELRIVYSWLSLFYEFFQNFRDIIPVDFLNTDEYKSVKSLKEYY 1087
                      68899************************************9999888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1107 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       579  (0.032294); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.73u 0.27s 00:00:01.00 Elapsed: 00:00:00.45
# Mc/sec: 7438.33
//
Query:       EPX71166.1  [L=474]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.4e-46  156.2   0.0    2.4e-17   62.5   0.0    3.2  3  RRM_1           RNA recognition motif. (a.k.a. RRM, RBD, or R
    4.5e-07   29.5   0.0    0.00049   19.7   0.0    2.2  2  RRM_5           RNA recognition motif. (a.k.a. RRM, RBD, or R
    0.00032   20.7   0.0     0.0035   17.4   0.0    2.3  3  RRM_3           RNA binding motif
    0.00085   19.1   0.0     0.0029   17.4   0.0    1.9  2  RRM_occluded    Occluded RNA-recognition motif
     0.0011   19.0   0.0       0.22   11.6   0.0    2.6  3  RRM_7           RNA recognition motif
  ------ inclusion threshold ------
       0.24   11.5   0.0         43    4.3   0.0    3.0  3  Cas_Cas2CT1978  CRISPR-associated protein (Cas_Cas2CT1978)


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.5   0.0   3.3e-10   9.9e-07       2      67 ..      87     152 ..      86     154 .. 0.89
   2 !   61.7   0.0   1.4e-20   4.3e-17       1      70 []     179     250 ..     179     250 .. 0.98
   3 !   62.5   0.0   7.9e-21   2.4e-17       1      70 []     304     368 ..     304     368 .. 0.98

  Alignments for each domain:
  == domain 1  score: 28.5 bits;  conditional E-value: 3.3e-10
                 EEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTE CS
       RRM_1   2 fVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggr 67 
                 ++g L p ++e  + +     G  + +kl+ +  tg + g++f++F ++e+A++A+e +n k ++g+
  EPX71166.1  87 WMGELEPWLNELYIQQAWASLGHNVIVKLIQNkYTGLNSGYCFIDFSTHEEAKAAME-YNDKPFPGT 152
                 67777778888888888889999999*******************************.***999986 PP

  == domain 2  score: 61.7 bits;  conditional E-value: 1.4e-20
                 EEEESETTTSSHHHHHHHHHT.TSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFsk.fGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrelk 70 
                 lfVg+L+p vte++L  lF   + + ks+k+++d +t++s+g++fV+F+++ + ++Al++++gk  g+r+++
  EPX71166.1 179 LFVGDLSPVVTERMLFSLFASdYPSCKSVKIMTDpSTRNSRGYGFVRFTDETEQKSALSTMQGKICGDRPIR 250
                 8******************999***********************************************986 PP

  == domain 3  score: 62.5 bits;  conditional E-value: 7.9e-21
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrelk 70 
                 +fVg L+++v+e++L++lF++fG+i+ +k+++      kg++fV+F s+ +Ae A+++l+g+ lg+++++
  EPX71166.1 304 VFVGSLSKNVSENDLHALFQNFGDITYVKIPPG-----KGCGFVQFVSHQSAELAIAQLQGYPLGNSRIR 368
                 8*******************************7.....****************************9986 PP

>> RRM_5  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.0   0.00092       2.8      39     103 ..     188     262 ..     174     274 .. 0.78
   2 !   19.7   0.0   1.6e-07   0.00049       7     103 ..     283     376 ..     277     390 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.00092
       RRM_5  39 vnldklFnlfc.lYgnvervkfl.....ktkketalvqmgdasaveravqHLnnaklfgkrleval....SKqqa 103
                 v+  +lF lf+  Y   + vk++     ++ +++ +v   d+++ + a++ ++++   +++++v +    SK q 
  EPX71166.1 188 VTERMLFSLFAsDYPSCKSVKIMtdpstRNSRGYGFVRFTDETEQKSALSTMQGKICGDRPIRVGIatpkSKAQV 262
                 78899*****626**********655555889**********************988777776654223355555 PP

  == domain 2  score: 19.7 bits;  conditional E-value: 1.6e-07
       RRM_5   7 sllasvaatgspgaagvaegsVllVyglepdkvnldklFnlfclYgnvervkflktkketalvqmgdasaveravqHLnnaklfgkrlevalSKqqa 103
                 + l+++  ++   + + +++s ++V  l + +v  + l  lf  +g++  vk+    k+  +vq  + +++e+a+  L++ +l ++r+++   ++q+
  EPX71166.1 283 QSLPQPMPQPV-PQYPDTTNSTVFVGSLSK-NVSENDLHALFQNFGDITYVKIPP-GKGCGFVQFVSHQSAELAIAQLQGYPLGNSRIRLSWGRNQN 376
                 45555555555.456778999999*99976.577788***************965.579************************888***99988887 PP

>> RRM_3  RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.35   1.1e+03      40      55 ..     128     143 ..     109     148 .. 0.79
   2 ?   -2.5   0.0       1.8   5.5e+03      40      56 ..     222     238 ..     217     245 .. 0.79
   3 !   17.4   0.0   1.2e-06    0.0035       8      57 ..     307     357 ..     303     369 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.35
                 EEEEESSHHHHHHHHH CS
       RRM_3  40 gevrFkedeeakkale 55 
                 + + F ++eeak+a+e
  EPX71166.1 128 CFIDFSTHEEAKAAME 143
                 6788999999*99998 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.8
                 EEEEESSHHHHHHHHHH CS
       RRM_3  40 gevrFkedeeakkalek 56 
                 g vrF ++ e k al  
  EPX71166.1 222 GFVRFTDETEQKSALST 238
                 77999999888888765 PP

  == domain 3  score: 17.4 bits;  conditional E-value: 1.2e-06
                 E.-SSS--HHHHHHHCHCCS-ECEEEE-TTSSEEEEEESSHHHHHHHHHHH CS
       RRM_3   8 G.lnkelsredikellsklgevayvdyekgdkegevrFkedeeakkaleka 57 
                 G l+k++s +d++ l++++g++ yv    g+  g v+F ++++a+ a+ ++
  EPX71166.1 307 GsLSKNVSENDLHALFQNFGDITYVKIPPGKGCGFVQFVSHQSAELAIAQL 357
                 44899***************************************9998776 PP

>> RRM_occluded  Occluded RNA-recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       2.1   6.2e+03      49      65 ..     135     151 ..     128     153 .. 0.71
   2 !   17.4   0.0   9.8e-07    0.0029       3      70 ..     303     369 ..     301     373 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 2.1
  RRM_occluded  49 kiagkasLaLdgsefeg 65 
                   +  +ka+++ + + f g
    EPX71166.1 135 HEEAKAAMEYNDKPFPG 151
                   44589999999888876 PP

  == domain 2  score: 17.4 bits;  conditional E-value: 9.8e-07
  RRM_occluded   3 tisllplsDtvnkariralveekegeikkivLvpdheGAivefkdekiagkasLaLdgsefegkklrc 70 
                   t+ +  ls +v+++ + al+++  g+i+ + + p +++ +v+f ++++a  a+ +L+g+ + + ++r 
    EPX71166.1 303 TVFVGSLSKNVSENDLHALFQNF-GDITYVKIPPGKGCGFVQFVSHQSAELAIAQLQGYPLGNSRIRL 369
                   556667999**************.****************************************9996 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       4.3   1.3e+04      49      61 ..     124     136 ..     117     143 .. 0.68
   2 ?    4.5   0.0     0.012        37       5      67 ..     180     236 ..     177     262 .. 0.76
   3 !   11.6   0.0   7.4e-05      0.22       3      29 ..     303     329 ..     301     353 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 4.3
       RRM_7  49 akgyvflvfedek 61 
                 ++gy f+ f++++
  EPX71166.1 124 NSGYCFIDFSTHE 136
                 5789998887654 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.012
       RRM_7   5 FvGGlPiDiteeelkatfkefgkvlvdwPkkaeskkkaaenskaakgyvflvfedeksvkaLl 67 
                 FvG l + +te+ l      f+  + d+P  +  k  +  +++  +gy f+ f+de+  k+ l
  EPX71166.1 180 FVGDLSPVVTERML------FSLFASDYPSCKSVKIMTDPSTRNSRGYGFVRFTDETEQKSAL 236
                 66666666666655......34445699998777777666788889********998766555 PP

  == domain 3  score: 11.6 bits;  conditional E-value: 7.4e-05
       RRM_7   3 kvFvGGlPiDiteeelkatfkefgkvl 29 
                  vFvG l  +++e++l+a f++fg+++
  EPX71166.1 303 TVFVGSLSKNVSENDLHALFQNFGDIT 329
                 59**********************975 PP

>> Cas_Cas2CT1978  CRISPR-associated protein (Cas_Cas2CT1978)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0     0.079   2.4e+02      13      67 ..      80     141 ..      76     147 .. 0.74
   2 ?    1.0   0.0      0.15   4.4e+02      27      71 ..     178     226 ..     173     239 .. 0.71
   3 ?    4.3   0.0     0.015        43      26      71 ..     302     347 ..     300     362 .. 0.70

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.079
                     HHHHHHHHSEEEET...TEEEEEE-HHHHHHHHHHHHHH....-TSSEEEEEEE-SSSSSEE CS
  Cas_Cas2CT1978  13 lRGeLtrwllEvra...gVyvgrvsarVreklwerveek....ieegsavmvysanneqgfe 67 
                      +G+ t w+ E+++    +y+++  a+  ++++ ++ ++    +++g + + +s+++e + +
      EPX71166.1  80 SHGKTTLWMGELEPwlnELYIQQAWASLGHNVIVKLIQNkytgLNSGYCFIDFSTHEEAKAA 141
                     57888999999988555689999888888888877777766667778888777777776655 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.15
                     TEEEEEE-HHHHHHHHHHHHHH....-TSSEEEEEEE-SSSSSEEEEEE CS
  Cas_Cas2CT1978  27 gVyvgrvsarVreklwerveek....ieegsavmvysanneqgfeirtl 71 
                     +++vg++s  V e+++  + ++    +++ +++   s++n+ g+ +  +
      EPX71166.1 178 SLFVGDLSPVVTERMLFSLFASdypsCKSVKIMTDPSTRNSRGYGFVRF 226
                     689********99988877776655555555555556666778777666 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.015
                     TTEEEEEE-HHHHHHHHHHHHHH-TSSEEEEEEE-SSSSSEEEEEE CS
  Cas_Cas2CT1978  26 agVyvgrvsarVreklwerveekieegsavmvysanneqgfeirtl 71 
                     + V+vg++s++V e+ ++ + +++++   v + + +  + +++  +
      EPX71166.1 302 STVFVGSLSKNVSENDLHALFQNFGDITYVKIPPGKGCGFVQFVSH 347
                     67************99999999887776666655555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (474 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       335  (0.0186848); expected 358.6 (0.02)
Passed bias filter:                      242  (0.0134977); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 3514.10
//
Query:       EPX71167.1  [L=984]
Description: ATP-dependent DNA helicase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.7e-62  210.5   0.1    8.7e-62  208.9   0.1    1.8  1  SNF2_N         SNF2 family N-terminal domain
    3.5e-18   65.9   0.0    8.6e-18   64.7   0.0    1.7  1  Helicase_C     Helicase conserved C-terminal domain
    1.7e-06   27.8   2.6    7.8e-06   25.7   2.9    2.0  2  zf-C3HC4       Zinc finger, C3HC4 type (RING finger)
    1.1e-05   25.5   0.1    4.5e-05   23.5   0.0    2.0  2  ResIII         Type III restriction enzyme, res subunit
    6.9e-05   22.8   1.7    6.9e-05   22.8   1.7    2.4  2  zf-RING_UBOX   RING-type zinc-finger
    0.00019   21.2   5.6    0.00019   21.2   5.6    2.2  2  zf-C3HC4_3     Zinc finger, C3HC4 type (RING finger)
    0.00034   19.9   0.0     0.0007   18.9   0.0    1.4  1  ERCC3_RAD25_C  ERCC3/RAD25/XPB C-terminal helicase
    0.00035   20.4   3.7     0.0011   18.7   3.7    1.9  1  Prok-RING_4    Prokaryotic RING finger family 4
    0.00055   19.7   3.1    0.00055   19.7   3.1    2.5  2  zf-C3HC4_2     Zinc finger, C3HC4 type (RING finger)
     0.0014   18.7   2.8     0.0014   18.7   2.8    2.0  2  zf-C3HC4_4     zinc finger of C3HC4-type, RING
     0.0032   17.2   0.0     0.0096   15.7   0.0    1.8  1  DEAD           DEAD/DEAH box helicase
     0.0042   17.4   7.7     0.0042   17.4   7.7    2.6  3  zf-RING_2      Ring finger domain
     0.0096   15.9   5.8      0.039   13.9   5.9    2.1  1  zf-RING_5      zinc-RING finger domain
  ------ inclusion threshold ------
      0.022   13.6   0.0      0.039   12.8   0.0    1.3  1  AAA_34         P-loop containing NTP hydrolase pore-1
      0.025   14.4   1.9      0.071   13.0   1.9    1.8  1  zf-RING_6      zf-RING of BARD1-type protein
       0.13   12.2   1.0        0.3   11.0   1.0    1.6  1  Baculo_IE-1    Baculovirus immediate-early protein (IE-0)
       0.66   10.0   2.8        1.7    8.7   2.8    1.7  1  Gin            Inhibitor of sigma-G Gin


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  208.9   0.1   8.2e-65   8.7e-62      54     349 ..     355     652 ..     340     653 .. 0.86

  Alignments for each domain:
  == domain 1  score: 208.9 bits;  conditional E-value: 8.2e-65
                 TT--EEE---TTS--HHHHHHHHH...HHTTTS---.......S-EEEE--HHHHHHHHHHHHHH-.TTS-EEE--SSHHHH----------------- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  54 svrGGiLaDemGLGKTvqvlalilaqrakeekdkekkrkdtlagptLivvPaslldqWeneierhv.sssalrvlvyggqkkmkkkntkvapklladyd 151
                   +GG+LaD+mGLGKTvq+lal+    +   +       d+  + tLiv+P +l++qW +ei + + +s++ +v+v++gq+     +++ ++k l++yd
  EPX71167.1 355 TKKGGVLADDMGLGKTVQILALLV---SRPSN-------DPKTKTTLIVAPVALVQQWRREIIAKIkPSMRPTVYVHHGQS-----KKHRFAKELTQYD 438
                 578*********************...33333.......444578****************87776156778899999974.....234579999**** PP

                 EEEE-HHHHHHHT.....................TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHHHHHHH-TTTT CS
                 xxxxxxxxxxxxxxxx...............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 152 vvittYdvlsreaelq...............kkrsvlkqvewkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledlygLlkfLreepf 235
                 vv+ttY+v++ e   +                +  ++ + +w rvvlDE++t+kn ++  a  ++ L++  rw+l+GTP+qn+ e++y+L+kfLr++p+
  EPX71167.1 439 VVLTTYNVIAYEYRHRmayeqsledgaplkkFEHLPFFEANWYRVVLDEAQTIKNRNTLSARGCCLLQSTLRWCLSGTPMQNGIEEFYSLVKFLRIQPY 537
                 **********76655599***********7656668899*****************8888888888********************************* PP

                 --HHHHHHHTHHHHH..HHHHHHHHHHHTT-STTEE---GGGT.....--S---EEEEEEEEE--HHHHHHHH....................HHHHHH CS
                 xxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 236 gekqtfdkllqrpie..aqaekgrsrLlqllqrlmlrrakkdv.....eknlPpkteeiiflklskverksYnrllevlrkkalakllkrseaalksss 327
                 +++  f++ +   +   + +   ++r + l++ ++lrr+k+          lPpkt++     lsk e+++Yn +l++ ++  + k  ++  ++++ +s
  EPX71167.1 538 CDWSHFSRDFVGRMGqeSDSSRAMKRFRGLIKAVLLRRTKATKidgkpILTLPPKTVRKEESALSKPEMEFYN-ALQAGAQIQMRKYMQEGTVTTHYGS 635
                 **999999998887733556667789**************97767554458**********************.8888888888888888889999999 PP

                 -HHH-HHHHHHHHHHHHH---X CS
                 xxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 328 kskekilelllelrqacnhpql 349
                      il lll+lrqac+hp+l
  EPX71167.1 636 -----ILVLLLRLRQACCHPWL 652
                 .....***************98 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.7   0.0   8.2e-21   8.6e-18       6     111 .]     821     927 ..     816     927 .. 0.90

  Alignments for each domain:
  == domain 1  score: 64.7 bits;  conditional E-value: 8.2e-21
                 HHHHHHHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH.TTSSS.EEEESGGGTSSSTSTTESEEEESSSSSSHHHHHH CS
  Helicase_C   6 llellkleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfn.kgesd.vLiatdvaerGidipkvnlVinfdlprnvtsyiq 102
                 ++ +l +e+ ++kil+f+++++ le +++ l++++++++ +hg l+   r+e++ qf  + +s+ +Li+ +++  G++++++n+V  +d+ +n+    q
  EPX71167.1 821 ITSIL-KEHPQDKILVFSQFVSFLELFTVPLKQNNVQFIHYHGGLSPTARNEAILQFEtNPNSNvLLISLKAGNVGLNLTCANHVLVLDPFWNPYIEEQ 918
                 66777.899*************9955444489999**********************9766677699******************************** PP

                 HHTTSSSTT CS
  Helicase_C 103 riGRtgRag 111
                 +i+R++R+g
  EPX71167.1 919 AIDRAHRIG 927
                 *******97 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   2.9   7.4e-09   7.8e-06       1      41 []     693     744 ..     693     744 .. 0.91
   2 ?    0.7   0.1      0.48   5.1e+02       1      12 [.     741     752 ..     741     755 .. 0.83

  Alignments for each domain:
  == domain 1  score: 25.7 bits;  conditional E-value: 7.4e-09
                 -TTT-S--SS-E.E-TTS--B-CHHHHHHHHC...........TSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepnelleCkHsfCskCirkilks...........rkkvkCPlC 41 
                 C++C++++ + + +++C+H +C++C+++++ s           + + kC +C
  EPX71167.1 693 CSVCQDYVLDLQIIIPCGHFVCRECLSHLITSsevaaqrdgmeEATPKCAVC 744
                 ******************************9999999999887677778888 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.48
                 -TTT-S--SS-E CS
    zf-C3HC4   1 CpiCleeakepn 12 
                 C++C+e+++  n
  EPX71167.1 741 CAVCFEYITPDN 752
                 ******998765 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1         3   3.1e+03     103     137 ..     101     145 ..      87     166 .. 0.52
   2 !   23.5   0.0   4.3e-08   4.5e-05       5     122 ..     338     459 ..     335     516 .. 0.72

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 3
                 .-SEEEEEHHHHHHTH................HHHTTT-S..EEE CS
      ResIII 103 nkkilvttiqsldadseee........eeeseellrdrfd..vii 137
                 n+++++ +  + + + +          + ++++l+++++d  ++i
  EPX71167.1 101 NSNLIFLSPRRSSPEDRLSlvkredasSHKQNQLQSEKEDpiIVI 145
                 444444444444444433344444444333444444444422444 PP

  == domain 2  score: 23.5 bits;  conditional E-value: 4.3e-08
                 -HHHHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--....... CS
      ResIII   5 reyQeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkeekflflvprkslleqtleefkkflseaykeigkkvsgdkkka.kekdst 102
                  e+Q+e +  +l+k+++  +k g+++   G GKT+ +++l  +  ++ ++ k+ ++v   +l++q+++e+   +++    +  + +g++kk+ ++k+ t
  EPX71167.1 338 MEHQKEGLA-WLKKMEEGTKKGGVLADDMGLGKTVQILALLVSRPSNDPKTKTTLIVAPVALVQQWRREIIAKIKPSMRPTVYVHHGQSKKHrFAKELT 435
                 678888775.66788878888999***********99665555555566677777777899******999777777666655555555555567888** PP

                 .-SEEEEEHHHHHHTH........ CS
      ResIII 103 nkkilvttiqsldadseee....e 122
                 + ++++tt++ +  + +++    +
  EPX71167.1 436 QYDVVLTTYNVIAYEYRHRmayeQ 459
                 **********99998866655442 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   1.7   6.6e-08   6.9e-05       1      27 [.     693     730 ..     693     742 .. 0.63
   2 ?   -0.8   0.1       1.6   1.6e+03       1       9 [.     741     749 ..     741     755 .. 0.84

  Alignments for each domain:
  == domain 1  score: 22.8 bits;  conditional E-value: 6.6e-08
  zf-RING_UBOX   1 CpICle.lftdPlvlpCGHtFCreCl......w....e 27 
                   C++C++ +++  ++ pCGH  CreCl           +
    EPX71167.1 693 CSVCQDyVLDLQIIIPCGHFVCRECLshlitsSevaaQ 730
                   *****84555343459**********655443134444 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 1.6
  zf-RING_UBOX   1 CpIClelft 9  
                   C +C+e  t
    EPX71167.1 741 CAVCFEYIT 749
                   *****9875 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.3       3.6   3.8e+03      19      32 ..      14      27 ..       4      34 .. 0.74
   2 !   21.2   5.6   1.8e-07   0.00019       4      45 ..     692     746 ..     689     750 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 3.6
                TEEEEEE-HHHHHH CS
  zf-C3HC4_3 19 pCgHlvlCeeCaek 32
                +C H+  C + a++
  EPX71167.1 14 QCSHFPPCLQDAKH 27
                68888777776666 PP

  == domain 2  score: 21.2 bits;  conditional E-value: 1.8e-07
                 B-TTTSSSBS-E.EETTEEEEEE-HHHHHHHHH.............TT-B-TTT-- CS
  zf-C3HC4_3   4 eCviClerprnv.vllpCgHlvlCeeCaekllk.............rkkkCpiCrr 45 
                  C++C++   +  +++pCgH+ +C eC+++l                ++kC +C +
  EPX71167.1 692 RCSVCQDYVLDLqIIIPCGHF-VCRECLSHLITssevaaqrdgmeeATPKCAVCFE 746
                 7******988854999*****.*********8877788777777777777877765 PP

>> ERCC3_RAD25_C  ERCC3/RAD25/XPB C-terminal helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   6.6e-07    0.0007      56     129 ..     826     905 ..     817     930 .. 0.87

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 6.6e-07
  ERCC3_RAD25_C  56 hekrgDkiivfsDnvfaLkeyakklkk...pyi..yGetseaerlkilqkfkknpkvntifls.kvgDtsiDlPeanvli 129
                    +e+ +Dki+vfs  v  L+ ++  lk+   ++i  +G  s + r + + +f++np+ n++++s k g+  ++l  an ++
     EPX71167.1 826 KEHPQDKILVFSQFVSFLELFTVPLKQnnvQFIhyHGGLSPTARNEAILQFETNPNSNVLLISlKAGNVGLNLTCANHVL 905
                    57779**************9999887622246644699************************9899999****9999765 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   3.7   1.1e-06    0.0011       1      28 [.     693     721 ..     693     730 .. 0.80

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 1.1e-06
  Prok-RING_4   1 CvlCgeq.ekkailepCgHlvCkeCfdsk 28 
                  C +C+       i++pCgH vC+eC+++ 
   EPX71167.1 693 CSVCQDYvLDLQIIIPCGHFVCRECLSHL 721
                  77887762455799***********9986 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   3.1   5.3e-07   0.00055       1      31 [.     692     722 ..     692     727 .. 0.88
   2 ?    0.5   0.1      0.52   5.4e+02       1       9 [.     740     748 ..     740     752 .. 0.85

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 5.3e-07
  zf-C3HC4_2   1 kCpiCldmlkdpsvvtpCgHvfCqkCilrsL 31 
                 +C +C+d   d   ++pCgH  C++C+   +
  EPX71167.1 692 RCSVCQDYVLDLQIIIPCGHFVCRECLSHLI 722
                 6**********99999**********98755 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.52
  zf-C3HC4_2   1 kCpiCldml 9  
                 kC++C++ +
  EPX71167.1 740 KCAVCFEYI 748
                 7*****977 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   2.8   1.4e-06    0.0014       1      32 [.     693     725 ..     693     731 .. 0.87
   2 ?   -2.0   0.5       3.9   4.1e+03       1       8 [.     741     748 ..     741     750 .. 0.87

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 1.4e-06
  zf-C3HC4_4   1 CPiCldY.LekPvsleCGhsfClsCisslqkep 32 
                 C +C dY L   + ++CGh +C +C+s+l  ++
  EPX71167.1 693 CSVCQDYvLDLQIIIPCGHFVCRECLSHLITSS 725
                 99*****556689**************998776 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 3.9
  zf-C3HC4_4   1 CPiCldYL 8  
                 C +C +Y+
  EPX71167.1 741 CAVCFEYI 748
                 99****97 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   9.1e-06    0.0096      20     133 ..     362     491 ..     340     499 .. 0.70

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 9.1e-06
                 EESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTT.STSEEEEEETTSSHHHHHHHHHTTCSEEEEEHHHHHHHH..... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..... RF
        DEAD  20 aaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkky.idlrvlliiggvaardqlskldngvdivvgtpgrlddll..... 112
                 a + G GKT   l  ++++ ++  + +++ +liv+P  +L++q  +++   +k+ ++ +v +  g++++++  ++l  ++d+v++t   ++        
  EPX71167.1 362 ADDMGLGKTVQILALLVSRPSN--DPKTKTTLIVAPV-ALVQQWRREIIAKIKPsMRPTVYVHHGQSKKHRFAKEL-TQYDVVLTTYNVIAYEYrhrma 456
                 56789******99999988876..7777789999997.8********99999984666666666777777777788.99*******9777765555555 PP

                 ............HCTSSHCTTEEE.......EEEETHHHH CS
                 ............xxxxxxxxxxxx.......xxxxxxxxx RF
        DEAD 113 ............stgklnlsqvrf.......lVlDEadrl 133
                             +     ++++ f       +VlDEa+++
  EPX71167.1 457 yeqsledgaplkK-----FEHLPFfeanwyrVVLDEAQTI 491
                 5544443333322.....2222222223356777777666 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.9       9.8     1e+04      20      30 ..      14      22 ..       3      29 .. 0.57
   2 !   17.4   7.7   3.9e-06    0.0042       2      43 ..     692     744 ..     691     745 .. 0.72
   3 ?   -0.7   0.1       1.8   1.9e+03       2      12 ..     740     750 ..     739     754 .. 0.75

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 9.8
   zf-RING_2 20 pCgHvfhreCl 30
                +C+H+    Cl
  EPX71167.1 14 QCSHF--PPCL 22
                58884..2355 PP

  == domain 2  score: 17.4 bits;  conditional E-value: 3.9e-06
   zf-RING_2   2 eCpICleelssadsvlllpCgHvfhreClerwlrssst.............CPlC 43 
                  C++C++ + + + ++  pCgH+ +reCl+++++ss+              C +C
  EPX71167.1 692 RCSVCQDYVLDLQIII--PCGHFVCRECLSHLITSSEVaaqrdgmeeatpkCAVC 744
                 6****87776655555..7************887776555555666666666555 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 1.8
   zf-RING_2   2 eCpICleelss 12 
                 +C++C+e +++
  EPX71167.1 740 KCAVCFEYITP 750
                 7****977754 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   5.9   3.7e-05     0.039       2      42 ..     693     744 ..     692     746 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 3.7e-05
   zf-RING_5   2 CnkCfeklskeekfyltsCgHifCekClkkll.............ekeavCpiC 42 
                 C++C + +   +  ++ +CgH++C +Cl++l              e+  +C +C
  EPX71167.1 693 CSVCQDYV--LDLQIIIPCGHFVCRECLSHLItssevaaqrdgmeEATPKCAVC 744
                 77887777..5667899**************99999999999998888888888 PP

>> AAA_34  P-loop containing NTP hydrolase pore-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   3.7e-05     0.039      53     157 ..     349     455 ..     332     507 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3.7e-05
      AAA_34  53 ellpdgkRaGfllGDgaGvGkgrqiagiilenll.qgrkkavwvsvsedLkeDaerDl.kdigaseievvalnklkegkkikeseelkeGvlFvtYstl 149
                 +++++g+++G +l D++G+Gk+ qi ++++++   + ++k   +    +L++  +r++   i+ s  + v +++ + +k+  ++e ++  v+++tY+  
  EPX71167.1 349 KKMEEGTKKGGVLADDMGLGKTVQILALLVSRPSnDPKTKTTLIVAPVALVQQWRREIiAKIKPSMRPTVYVHHGQSKKHRFAKELTQYDVVLTTYNVI 447
                 6788999*****************977766665516788888999999********9724576665555544444444444367777888*******99 PP

      AAA_34 150 iseskkkk 157
                   e +++ 
  EPX71167.1 448 AYEYRHRM 455
                 88877644 PP

>> zf-RING_6  zf-RING of BARD1-type protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   1.9   6.8e-05     0.071       6      41 ..     689     724 ..     682     728 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 6.8e-05
   zf-RING_6   6 kllrcsrctdilrepvclggcehifcsncisdcfgs 41 
                  +lrcs c d + +   +  c h  c +c+s  + s
  EPX71167.1 689 EMLRCSVCQDYVLDLQIIIPCGHFVCRECLSHLITS 724
                 68****************************987665 PP

>> Baculo_IE-1  Baculovirus immediate-early protein (IE-0)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   1.0   0.00028       0.3      35     120 ..     646     727 ..     618     750 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00028
  Baculo_IE-1  35 ycckklvkklkaaldelleeseksleviklinervqvlnvflekklyqcnicedtsaeerflkPneccGykicnlcyanlwkfstv 120
                  +cc+     ++++ d+  ++ +k+ + +   +   + ln ++ +++ +c++c+d   + + + P   cG+ +c  c ++l   s+v
   EPX71167.1 646 ACCHPWLLVARETTDDDNDSFQKEARSLYN-KLSGEALNRLKTTEMLRCSVCQDYVLDLQIIIP---CGHFVCRECLSHLITSSEV 727
                  566655555555555554444444443322.22335788899999*****************99...***********99877765 PP

>> Gin  Inhibitor of sigma-G Gin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   2.8    0.0016       1.7       1      29 [.     693     723 ..     693     728 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0016
                 -TTT--EESS.EE-S.SS--EEHHHHHHHHH CS
         Gin   1 CiiCekekee.Giii.lgkfICeeCekkivn 29 
                 C +C++   +  iii +g+f+C+eC + +++
  EPX71167.1 693 CSVCQDYVLDlQIIIpCGHFVCRECLSHLIT 723
                 99999999977666659*********99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (984 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       679  (0.0378716); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.76u 0.32s 00:00:01.08 Elapsed: 00:00:00.49
# Mc/sec: 6089.75
//
Query:       EPX71168.1  [L=288]
Description: N-amidase Nta1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.4e-13   49.5   0.0      6e-12   45.4   0.0    2.0  2  CN_hydrolase  Carbon-nitrogen hydrolase
  ------ inclusion threshold ------
       0.14   10.8   0.0       0.21   10.3   0.0    1.2  1  HgmA          homogentisate 1,2-dioxygenase


Domain annotation for each model (and alignments):
>> CN_hydrolase  Carbon-nitrogen hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.4   0.0   6.7e-16     6e-12       4     156 ..       5     158 ..       2     165 .. 0.85
   2 ?    2.2   0.0      0.01        93     188     229 ..     222     261 ..     202     287 .. 0.84

  Alignments for each domain:
  == domain 1  score: 45.4 bits;  conditional E-value: 6.7e-16
                   EEEBB-STTHHHHHHHHHHHHHHHHHHT..TESEEEEETTTTTBS....SSHHHHHHHHB.HSSSHHHHHHHHHHHHHTEEEEEEEEEEECCTTEEE CS
  CN_hydrolase   4 vvQlpqkaadleanlqklleliaeAark..gadLivlPElfitgy....keeahfleaAe.aglgetlallaalarkngiavvigliereltngklq 93 
                   +vQ +++  + + n++kl  l+++  +    +dL+v+PEl + gy    ++e +++  ++  + +++l + + +a+++ ++ vig++e ++ +++  
    EPX71168.1   5 CVQFNPTIGQVQNNIEKLSLLLKKNEDAlrSVDLLVFPELVLSGYnfknSSEIEPFLEDIkDETSPSLSFAKTVAEQYRCYTVIGFPEIQQVKDQKS 101
                   5788887778888888888888885555779**************999977777777788999**************************99666666 PP

                   EEEEEEEEETTSEEEEEEE-SS--EECTTSCECCGHHTSCS-SS..S-EEEETTEEEEEEEGGGG CS
  CN_hydrolase  94 ayntavlldldgklvgkyrKlhLfpgeprpptaverelfepgdg..ipvfdtpvgkiGaaiCyei 156
                   ++n+  l++++ kl++ y+K+ L          + ++  ++g+g  ++   +++g i++aiC +i
    EPX71168.1 102 YFNSTALVSPQAKLLKVYQKHFLY--------DTDKTWAKQGKGfmYDESLPDLGPISMAICMDI 158
                   8*********************96........455666677777877777888889999999987 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.01
                   HHHHHHHHHHHHHHHTSEEEEEEBEEEHCETTEEEE--EEEE CS
  CN_hydrolase 188 ppqwellgraralengcfviaanqvggyeqlilwpvghSaii 229
                   +++   l+    +e +c ++ an++g   + ++ + g+S+i 
    EPX71168.1 222 KYWVARLSPLVDMEKDCTLLIANRWGE--ERDVTFAGSSCIL 261
                   6677778888889999999********..***********95 PP

>> HgmA  homogentisate 1,2-dioxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   2.3e-05      0.21     204     240 ..     143     181 ..     126     203 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 2.3e-05
                 E----GGGT.TS-B.S-GGGEEEE-------EEEEEEEE CS
        HgmA 204 klPdlGPiG.angl.anprdfkaPvaayedkeskeltvi 240
                 +lPdlGPi  a ++  np+df+aP  ++e  +  + +++
  EPX71168.1 143 SLPDLGPISmAICMdINPKDFTAPFEKFEYGNFIKDQIM 181
                 69******83556646************98887555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       360  (0.0200792); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 1954.08
//
Query:       EPX71169.1  [L=1654]
Description: U3 snoRNP-associated protein Utp10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.9e-37  127.2   6.4    4.2e-36  124.2   5.2    3.1  2  BP28CT           BP28CT (NUC211) domain
    3.6e-13   49.9  17.4    5.6e-13   49.3   0.1    5.8  6  U3snoRNP10       U3 small nucleolar RNA-associated protein 10
    0.00016   22.0   6.5      0.087   13.2   0.1    4.8  5  HEAT_2           HEAT repeats
  ------ inclusion threshold ------
      0.017   14.0   0.1        3.9    6.2   0.0    2.4  2  Na_H_antiport_1  Na+/H+ antiporter 1
      0.018   15.3   0.3       0.14   12.4   0.1    2.5  2  TSP_NTD          Tail specific protease N-terminal domain
      0.023   14.7   7.1       0.14   12.2   0.1    5.2  5  Cnd1             non-SMC mitotic condensation complex subunit
        1.1    9.1   9.1          1    9.3   0.2    4.3  4  DUF3361          Domain of unknown function (DUF3361)
        1.4    9.6   4.5         62    4.3   0.0    4.9  5  Vac14_Fab1_bd    Vacuolar 14 Fab1-binding region


Domain annotation for each model (and alignments):
>> BP28CT  BP28CT (NUC211) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.37   8.4e+02      84     119 ..    1245    1280 ..    1223    1358 .. 0.84
   2 !  124.2   5.2   1.9e-39   4.2e-36       2     158 .]    1385    1523 ..    1384    1523 .. 0.89

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.37
                  HHHHHHHHHH--------TTHHHHHHHHHHHHH--- CS
      BP28CT   84 tfykllnklaekLkslftsYasyllenavelLkaln 119 
                  +    ++ l+++L   + +Y + ++e++++lL  ++
  EPX71169.1 1245 SSIVCITVLSNTLGARILPYLADIMESVLSLLFGAK 1280
                  5555667899999999****************4333 PP

  == domain 2  score: 124.2 bits;  conditional E-value: 1.9e-39
                  -HHHHHHHHHHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHH...HHTSTT-----HHHHHHHHHHHHH----- CS
      BP28CT    2 vsknlkelfkfflkaldlRreqaskkeeeeidevEesvieafvalvlKLneatFrPlFlklveWaeeesselskkdskeRlitfykllnklaekLks 98  
                  v++ +k++f+ffl+ +d Rr        e++d+vE++++++f+++v+KL+++tFrPlFl+l  Wa e+  e++ +   +R++ fy++l++++++Lks
  EPX71169.1 1385 VGTVYKSIFRFFLDSFDSRRSLFF---AEDVDNVETKAVNVFLKFVMKLSDTTFRPLFLRLQSWAMEDLRESDPSGIVSRQTFFYNFLTTFLDTLKS 1478
                  77889**************87775...47************************************7666555566666******************* PP

                  ---TTHHHHHHHHHHHHH---------HH...........HHHHHHHHHHHHHHHHGGGG CS
      BP28CT   99 lftsYasyllenavelLkalnekseeskekkkkkeekkveLlrlvlstLtkcflhDqdeF 158 
                  ++t+Y++y+l+++v++L++       +         +++eL++l++s+L+ +f++D++eF
  EPX71169.1 1479 IVTNYYAYVLDSTVDILSSK------D---------TNSELRHLIISSLAVAFENDTEEF 1523
                  *****************222......2.........3457******************99 PP

>> U3snoRNP10  U3 small nucleolar RNA-associated protein 10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.3   0.1   2.5e-16   5.6e-13      18     114 ..     249     345 ..     232     347 .. 0.88
   2 ?   -1.4   0.1       1.3   2.8e+03       3      36 ..     520     552 ..     519     555 .. 0.82
   3 ?    1.6   0.4      0.16   3.5e+02      62      98 ..     686     728 ..     656     743 .. 0.68
   4 ?   -0.2   0.1      0.56   1.3e+03      31     111 ..     913     951 ..     877    1010 .. 0.61
   5 !    6.5   0.1    0.0047        11      12      70 ..    1234    1297 ..    1224    1338 .. 0.74
   6 ?   -3.1   0.0       4.3   9.7e+03      45      63 ..    1346    1369 ..    1343    1424 .. 0.61

  Alignments for each domain:
  == domain 1  score: 49.3 bits;  conditional E-value: 2.5e-16
                 -HHHHHHHHHHHHHHHHTT-S-HHHHHHHHHHHHHH--GGGHHHHHHHHHHHHHT-SS-S.--HHHHHHHTTSTTHHHHHHHHTTTS--HHHHHHHHH CS
  U3snoRNP10  18 sadlqaaaymilsvLaskvpLsdkvleallesilknlskelaksallcllvlaqsqsakl.lpkkvlkallklpsladvLeelskeyrvdkfllallk 114
                 s+ +q++++m ls La+++pL  +v+  ll++i   ++++  ++al+c+ +l+q+q+ +  + k+ +++l +    + +L el+++yr+dk+++ ++ 
  EPX71169.1 249 STTFQISGFMCLSALAVSFPLHVAVIPPLLDAITLRITTDNIHQALICIGHLLQTQQGSIeFQKEWIERLEAYG-SSRLLLELNQKYRMDKLFTMYWF 345
                 3479****************************************************84446***********44.78*****************9986 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1.3
                 HHHHHHHHHHHT-TT-HHHHHHHHHHHHHHHHTT CS
  U3snoRNP10   3 tallpvllegLlssssadlqaaaymilsvLaskv 36 
                 +allp+ l +L  + s  ++  a+ i+s++++++
  EPX71169.1 520 QALLPTTLYALT-RTSLKVRSKALQIISQISQST 552
                 589999999999.566789999999999999876 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.16
                 H...........HHHHHHHHHT-SS-S--HHHHHHHTTSTTHHHHHHH CS
  U3snoRNP10  62 a...........llcllvlaqsqsakllpkkvlkallklpsladvLee 98 
                 a           + +ll+l+ ++  + l+++++k+l++   l++ L+e
  EPX71169.1 686 AeaivkvfdqhyFPSLLALVKTE--SALSQAACKHLVS---LQEKLKE 728
                 13344444555588888888877..77**********9...5555544 PP

  == domain 4  score: -0.2 bits;  conditional E-value: 0.56
                 HHHHTT-S-HHHHHHHHHHHHHH--GGGHHHHHHHHHHHHHT-SS-S--HHHHHHHTTSTTHHHHHHHHTTTS--HHHHHH CS
  U3snoRNP10  31 vLaskvpLsdkvleallesilknlskelaksallcllvlaqsqsakllpkkvlkallklpsladvLeelskeyrvdkflla 111
                 vL+    +s  v+e+ +++++++                                          L++ls++++ + ++ +
  EPX71169.1 913 VLSRDDAFSIHVIEQTIKTVISA------------------------------------------LVKLSSDFDSSLLISC 951
                 33333333334444444444444..........................................3333333333322222 PP

  == domain 5  score: 6.5 bits;  conditional E-value: 0.0047
                  HHT-TT-HHHHHHHHHHHHHHHHTT-S-HHH...HHHHHHHHHHH--.GGGHHHH....HHHHHHHH CS
  U3snoRNP10   12 gLlssssadlqaaaymilsvLaskvpLsdkv...leallesilknls.kelaksa....llcllvla 70  
                  gL+ s+ +d+q+++ + ++vL++   L +++   l  ++es+l+ l  ++  +++    l+c ++++
  EPX71169.1 1234 GLK-SKAKDVQVSSIVCITVLSNT--LGARIlpyLADIMESVLSLLFgAKNDSEGdlleLACFSMMI 1297
                  899.8889*******999999985..55555111456788888877754444444788888888887 PP

  == domain 6  score: -3.1 bits;  conditional E-value: 4.3
                  HHHHHHHHH--..GGGHHHH...H CS
  U3snoRNP10   45 allesilknls..kelaksa...l 63  
                   l++sil++++  ++l ++a   l
  EPX71169.1 1346 HLIKSILSAWTecTKLGSTAalrL 1369
                  577778877774433333333322 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.63   1.4e+03      31      59 ..     521     549 ..     496     566 .. 0.62
   2 ?   -2.5   0.0       3.2   7.2e+03       5      39 ..     702     738 ..     687     745 .. 0.50
   3 !    6.8   0.4    0.0038       8.5       5      67 ..    1117    1181 ..    1113    1188 .. 0.73
   4 ?   -0.7   0.0      0.83   1.9e+03       9      26 ..    1497    1515 ..    1488    1570 .. 0.72
   5 !   13.2   0.1   3.9e-05     0.087      13      84 ..    1548    1633 ..    1534    1637 .. 0.60

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.63
      HEAT_2  31 ealpaLvellededpavRraaaeaLgaig 59 
                  +lp+ + +l+ ++  vR  a + +++i 
  EPX71169.1 521 ALLPTTLYALTRTSLKVRSKALQIISQIS 549
                 55666666666777777777777666664 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 3.2
      HEAT_2   5 lqalendpdpevrraairaLg....rignpealpaLvel 39 
                 l+++ +  + ++ +aa++ L     ++++ ++l+++++l
  EPX71169.1 702 LALV-K-TESALSQAACKHLVslqeKLKESQYLELIRSL 738
                 3333.2.23344455555555333333333444444444 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.0038
      HEAT_2    5 lqalendpdpevrraairaLg.rignpealpaLvellededpavRraaaeaLga.igdpealpaL 67  
                    ++++d + +  +aa+r+L   + +++  +aL +ll de +  Rr a   L + +++ + +++L
  EPX71169.1 1117 GDIVKSDQEIDYVYAALRNLIaLLPEESFCAALAKLLHDERTLLRRKALGVLQQrVQRGAKVSSL 1181
                  5666677777777788888873567777799***************9999997514555555555 PP

  == domain 4  score: -0.7 bits;  conditional E-value: 0.83
      HEAT_2    9 endpdpevrraairaLg.r 26  
                  ++d + e+r+ +i +L+  
  EPX71169.1 1497 SKDTNSELRHLIISSLAvA 1515
                  3477777777777777752 PP

  == domain 5  score: 13.2 bits;  conditional E-value: 3.9e-05
      HEAT_2   13 dpevrraairaLgrignp.....ealpaLvellededpavRraaaeaLgai.g.........dpealpaLkellddddddvvReaAa 84  
                  d +v ++ai +L++ ++       +   L++ l++e+++vR  a++   ++ g         +p+++p+ +e++ ddd + v +a++
  EPX71169.1 1548 DNKVLIKAITELANVAPSsenykAINTPLLQHLRSENTDVRVLAIQIETQLyGrlaeqwvstLPQSVPFIAEIMEDDD-ENVEAATT 1633
                  556777788888855544344434456688888888888888888755444212223333335888888888886554.44455444 PP

>> Na_H_antiport_1  Na+/H+ antiporter 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0    0.0017       3.9     241     294 ..     792     850 ..     717     856 .. 0.84
   2 ?    5.2   0.1    0.0035         8     244     294 ..     887     937 ..     863     938 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0017
                      ......-HHHHHHHHHHHHHHHTHHHHHHHHHS---SSSS--ST.TTSHHHHHHHHHHH CS
  Na_H_antiport_1 241 e.....splerlehalhplvaflilPlFAlanagvslegeslseallspvtlgivlgLv 294
                      e     s le le++ +   ++li PlF ++n  +sl+++ +s++ l ++ lg +  +v
       EPX71169.1 792 ElrkvtSVLELLETKDAASHSYLIAPLFDILNQVISLKDQIVSANYLLQLLLGLLYDMV 850
                      04444478889999999999******************999999899888888877665 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0035
                      HHHHHHHHHHHHHHTHHHHHHHHHS---SSSS--ST.TTSHHHHHHHHHHH CS
  Na_H_antiport_1 244 lerlehalhplvaflilPlFAlanagvslegeslseallspvtlgivlgLv 294
                      ++ l+ha  ++v   ++P+F ++ + v  +++++s +++++ +  ++ +Lv
       EPX71169.1 887 VSGLSHAAPEVVLHGVMPIFTFMGTTVLSRDDAFSIHVIEQTIKTVISALV 937
                      66789999999*****************99999999999999999999886 PP

>> TSP_NTD  Tail specific protease N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       1.3   2.9e+03      40      76 ..     439     484 ..     438     487 .. 0.85
   2 ?   12.4   0.1   6.3e-05      0.14      18      48 ..    1387    1417 ..    1378    1442 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 1.3
     TSP_NTD  40 qsDidefe.kyrekld........dalkngdlsfaeeiynlyqkri 76 
                 +s id+fe + +e +d        d+  + +l+ ++++  +++kri
  EPX71169.1 439 RSKIDSFEePLKEPVDytpcvflaDDALSDNLTYFYDLLHKFTKRI 484
                 5678888888888888888888889999***************998 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 6.3e-05
     TSP_NTD   18 elskkvfdrYlkqLDpqklyflqsDidefek 48  
                  +++k +f  +l+++D+ +++f+++D+d+ e 
  EPX71169.1 1387 TVYKSIFRFFLDSFDSRRSLFFAEDVDNVET 1417
                  67899**********************9883 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1       1.3   2.8e+03      77     117 ..     375     415 ..     357     417 .. 0.91
   2 ?   -1.7   0.1       1.2   2.7e+03      69      96 ..     532     559 ..     502     622 .. 0.72
   3 ?   -2.3   0.0       1.8     4e+03      61      95 ..     865     900 ..     846     942 .. 0.67
   4 ?   12.2   0.1   6.4e-05      0.14      56     141 ..    1142    1229 ..    1130    1251 .. 0.72
   5 ?    1.6   0.0      0.12   2.6e+02      20      78 ..    1570    1632 ..    1551    1648 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.3
        Cnd1  77 nalaalteiseksenaiynllpdiisklsdalnecsewgqi 117
                  a+++l+ +s +se  ++++ + +i+++ ++ ++++ ++q+
  EPX71169.1 375 QAKLLLSTVSLQSEYSTLQSYRRVINNVDMQDKSVTTDSQT 415
                 689999******999**************999999999987 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.2
        Cnd1  69 DenprVvanalaalteiseksenaiynl 96 
                  ++ +V++ al ++++is+ +e+ i n+
  EPX71169.1 532 RTSLKVRSKALQIISQISQSTEKSISNV 559
                 4555777778888888887766666554 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 1.8
        Cnd1  61 selakll.eDenprVvanalaalteiseksenaiyn 95 
                 ++l  ++ + +np++++ al++ + +s+ +++ ++ 
  EPX71169.1 865 DTLVGCIrSTNNPQIQNKALLLVSGLSHAAPEVVLH 900
                 455555544455666666666666665555544444 PP

  == domain 4  score: 12.2 bits;  conditional E-value: 6.4e-05
        Cnd1   56 ekgflselaklleDenprVvanalaalteisek..senaiynllpdiisklsdalnecsewgqitilefLlsyip...kdkqeaeslvekl 141 
                  e+ f + lakll+De +  +  al +l++  ++  + + +++l+pd+ +++s+     +e++ +  +++L+++ +   k+++  es +e +
  EPX71169.1 1142 EESFCAALAKLLHDERTLLRRKALGVLQQRVQRgaKVSSLVTLVPDVTFNISN---GRDEETVQLAMDCLSDMAKrfkKNSEAFESAIEVV 1229
                  677999***************************65447899***********5...56777777777777776651104444445555555 PP

  == domain 5  score: 1.6 bits;  conditional E-value: 0.12
        Cnd1   20 eylvepLrkrLkDedpyVRktaaivvakL...ilndmvkekg.flselaklleDenprVvana 78  
                   ++ +pL + L+ e+  VR  a+ + ++L   + ++ v      +  +a+++eD++++V a +
  EPX71169.1 1570 KAINTPLLQHLRSENTDVRVLAIQIETQLygrLAEQWVSTLPqSVPFIAEIMEDDDENVEAAT 1632
                  56778999999999**********999998887888887777688999999999999998765 PP

>> DUF3361  Domain of unknown function (DUF3361)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1         2   4.4e+03     107     107 ..     531     531 ..     478     559 .. 0.52
   2 ?    9.3   0.2   0.00046         1      68     130 ..     835     896 ..     799     909 .. 0.85
   3 ?    2.6   0.0     0.051   1.1e+02      63     125 ..    1193    1254 ..    1181    1269 .. 0.89
   4 ?   -2.4   0.2       1.8     4e+03      67     118 ..    1547    1592 ..    1537    1599 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 2
     DUF3361 107 q 107
                  
  EPX71169.1 531 T 531
                 2 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00046
     DUF3361  68 dasilqrslaiLesivlnsselyelvekevtlesLiehLqssnqe.iqtnalaLlnALllkadd 130
                  + +lq  l  L  +v+++   +++++  +++++L+  ++s+n+  iq +al L+  L   a++
  EPX71169.1 835 ANYLLQLLLGLLYDMVCAAP--VKELSPSIRIDTLVGCIRSTNNPqIQNKALLLVSGLSHAAPE 896
                 45678888999999999999..99***************9988766*********999999886 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.051
     DUF3361   63 nksaadasilqrslaiLesivlnsselyelvekevtlesLiehLqssnqeiqtnalaLlnALl 125 
                  ++   d++++q +++ L  ++   +++ e  e+++++ s +  L+s+ + +q ++++ ++ L 
  EPX71169.1 1193 SN-GRDEETVQLAMDCLSDMAKRFKKNSEAFESAIEVVSGTYGLKSKAKDVQVSSIVCITVLS 1254
                  33.47999************************************************9998875 PP

  == domain 4  score: -2.4 bits;  conditional E-value: 1.8
     DUF3361   67 adasilqrslaiLesivlnsselyelvekevtlesLiehLqssnqeiqtnal 118 
                   d+++l +++  L +++ +s+ +y+ +++      L++hL+s+n+ +   a+
  EPX71169.1 1547 LDNKVLIKAITELANVAPSSE-NYKAINT-----PLLQHLRSENTDVRVLAI 1592
                  578888888888888888777.6766654.....578888888887766555 PP

>> Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       5.9   1.3e+04      25      56 ..     519     550 ..     499     558 .. 0.59
   2 ?   -2.0   0.0       2.5   5.6e+03      64      83 ..     927     946 ..     921     948 .. 0.73
   3 ?   -0.3   0.0      0.76   1.7e+03       7      36 ..    1247    1276 ..    1242    1321 .. 0.76
   4 ?    2.0   0.0      0.14   3.2e+02       7      72 ..    1367    1433 ..    1362    1439 .. 0.84
   5 ?    4.3   0.0     0.028        62      22      96 ..    1566    1640 ..    1552    1641 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 5.9
  Vac14_Fab1_bd  25 leeivkpvlkcfsDkdsrvRyyacEslyniak 56 
                    ++ ++++ l +++ ++ +vR  a   +  i++
     EPX71169.1 519 FQALLPTTLYALTRTSLKVRSKALQIISQISQ 550
                    55666666666666666666555555554444 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 2.5
  Vac14_Fab1_bd  64 kllneifdalvklvaDsdes 83 
                    ++++++ +alvkl++D d+s
     EPX71169.1 927 QTIKTVISALVKLSSDFDSS 946
                    45677888888888888765 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.76
  Vac14_Fab1_bd    7 ligLaavaialekkikeyleeivkpvlkcf 36  
                     ++ +  ++ +l+++i +yl +i+++vl+ +
     EPX71169.1 1247 IVCITVLSNTLGARILPYLADIMESVLSLL 1276
                     666777777888888888888888888765 PP

  == domain 4  score: 2.0 bits;  conditional E-value: 0.14
  Vac14_Fab1_bd    7 ligLaavaialekkikeyleeivkpvlkcfsDk.dsrvRyyacEslyniakvakgevlkllneifda 72  
                     l  L  + ++l+++++  + ++ k++++ f D+ dsr   + +E + n+  +a + +lk++ ++ d+
     EPX71169.1 1367 LRLLELIEMTLQNSTRAAVGTVYKSIFRFFLDSfDSRRSLFFAEDVDNVETKAVNVFLKFVMKLSDT 1433
                     5567788999********************9976888888999999999999999999988887665 PP

  == domain 5  score: 4.3 bits;  conditional E-value: 0.028
  Vac14_Fab1_bd   22 keyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalvklvaDsdesvksgaelldrllk 96  
                     +e  + i +p+l+ ++ +++ vR  a+     +   + ++ +++l +    + +++ D de+v  ++  l r++ 
     EPX71169.1 1566 SENYKAINTPLLQHLRSENTDVRVLAIQIETQLYGRLAEQWVSTLPQSVPFIAEIMEDDDENVEAATTELVRIVD 1640
                     5667889999*****************99999999999****************************999988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1654 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       842  (0.046963); expected 358.6 (0.02)
Passed bias filter:                      512  (0.0285571); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.96u 0.29s 00:00:01.25 Elapsed: 00:00:00.47
# Mc/sec: 10674.18
//
Query:       EPX71170.1  [L=419]
Description: ribosomal export complex protein Arx1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.8e-08   34.4   0.0    2.5e-08   33.9   0.0    1.3  1  Peptidase_M24  Metallopeptidase family M24
  ------ inclusion threshold ------
       0.12   12.5   0.0       0.26   11.4   0.0    1.5  1  F-112          F-112 protein


Domain annotation for each model (and alignments):
>> Peptidase_M24  Metallopeptidase family M24
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   0.0   2.7e-12   2.5e-08       2     103 ..      20     136 ..      19     203 .. 0.79

  Alignments for each domain:
  == domain 1  score: 33.9 bits;  conditional E-value: 2.7e-12
                    HHHHHHHHHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHHHTT.........TCEESSSSEEEEGGGGGSTTTBC..........SSSB--TTEEEE CS
  Peptidase_M24   2 lirkaariasaaleavleaikpgvterelaaeieattlkrhg.........arglafppivasgenaavlhytp..........ndrvlkegdlvl 78 
                    +++ a++++s+ +++++  + pg + rel+ + +++ ++++           +gla p++v+  +n+++  y+p          n+ +l+ gd+ +
     EPX71170.1  20 KYQDAGAVVSKSFHKLAPLFVPGASVRELCGLGDQF-IEEMVapmykskryEKGLAEPTSVC--VNNCAFNYSPgsetlvngveNSYRLNIGDVTK 112
                    6789************999***************99.55544666677777899999*9999..7888889999444444433344448888**** PP

                    EEEEEEETTEEEEEEEEEECSSGSH CS
  Peptidase_M24  79 idagaeydgyasDitrTvlvGkftp 103
                    + +++++dgy++ i++Tv+v  + p
     EPX71170.1 113 VAMACHIDGYTASICHTVVVT-PPP 136
                    ******************995.333 PP

>> F-112  F-112 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   2.9e-05      0.26      24      82 ..     183     242 ..     179     252 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 2.9e-05
                 HHHHHHHH---HHHHHHHHHHHHHHHHH-TTTEEEEE-SS-EEEEE--XXXXXX.XXXXX CS
       F-112  24 ledilaqfeisvssayaiqralkaicerhqdecevqkknrktvfkwikqeqkee.qkqeq 82 
                 +edi aqf++ vs    i r+ + +  +   +     +n k++++w   e++ee + q++
  EPX71170.1 183 VEDIAAQFHVHVSPGSRIRRVDRYLVGQITVDRLEEERNSKAAVEWPAPEEEEEeEAQKR 242
                 79**********************99999988888999*****9**88766554044544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (419 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       480  (0.0267723); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.30s 00:00:00.81 Elapsed: 00:00:00.46
# Mc/sec: 2744.79
//
Query:       EPX71171.1  [L=205]
Description: 3,4-dihydroxy-2-butanone 4-phosphate synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.8e-85  285.3   0.0      2e-85  285.2   0.0    1.0  1  DHBP_synthase  3,4-dihydroxy-2-butanone 4-phosphate synthase


Domain annotation for each model (and alignments):
>> DHBP_synthase  3,4-dihydroxy-2-butanone 4-phosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  285.2   0.0   1.1e-89     2e-85       1     192 []       6     199 ..       6     199 .. 0.98

  Alignments for each domain:
  == domain 1  score: 285.2 bits;  conditional E-value: 1.1e-89
                    HHHHHHHHTT--EEEESSTTTT-BEEEEEEGGG--HHHHHHHHHHB-S--EEEEEHHHHHHTT--BSSSS-SSTT---BB--EEESST-SSS-SHH CS
  DHBP_synthase   1 eeaiealkaGkfvivvDdedrenegdLiiaAekvtpekvafmirhasGlicvalteeradeLeLplmveenedkhktaftvsvdaaegttTGIsaa 96 
                    eeai+++k+Gkf++v+Dde renegdLiia +++t+e++af++rh+sG++cv++t er++eL++p+mve+ne++++ta++v+vd  eg+tTGIsa+
     EPX71171.1   6 EEAIQDFKNGKFLVVLDDETRENEGDLIIAGANLTTEQMAFLVRHSSGYVCVPMTGERLSELDIPMMVEHNEERMRTAYAVTVDFTEGVTTGISAH 101
                    79********************************************************************************************** PP

                    HHHHHHHHHH-TT.--GGGEEEEEEEEEEEE-TTGGGTS-SHHHHHHHHHHHTTS-SBEEEEEBB-TT.SCB-BHHHHHHHHHHHT-EEEEHHHHH CS
  DHBP_synthase  97 DRalTirkladpk.akpedfrrPGhvfplrareggvleRrghTEaavdLarlaglkpaavicellndd.gtmarrdeleefakkhglkiitiedli 190
                    DRalT+r+la+p+ ++p+ f+rPGhv+plrareggvl R ghTEaavdL++lagl+paa+icel++d+ g m r d++e+f+ ++g+k+iti++li
     EPX71171.1 102 DRALTTRQLANPNlKNPKAFNRPGHVVPLRAREGGVLARDGHTEAAVDLCKLAGLPPAAAICELVRDEdGLMSRFDDCEKFCSQWGIKMITIKSLI 197
                    ***********862599************************************************987688************************* PP

                    HH CS
  DHBP_synthase 191 ey 192
                    ey
     EPX71171.1 198 EY 199
                    98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       493  (0.0274974); expected 358.6 (0.02)
Passed bias filter:                      473  (0.0263818); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1445.69
//
Query:       EPX71172.1  [L=930]
Description: DNA replication factor C complex subunit Rfc1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      1e-57  194.7   0.3    2.3e-57  193.5   0.0    1.8  2  RFC1            Replication factor RFC1 C terminal domain
    8.4e-14   51.7   0.0    2.3e-13   50.3   0.0    1.8  1  BRCT            BRCA1 C Terminus (BRCT) domain
    6.6e-13   49.2   0.0    1.6e-12   48.0   0.0    1.7  1  AAA             ATPase family associated with various cellula
    5.4e-05   23.2   0.0    0.00011   22.1   0.0    1.4  1  Rad17           Rad17 P-loop domain
    8.7e-05   22.8   0.0    0.00023   21.4   0.0    1.7  1  AAA_22          AAA domain
    0.00012   21.9   0.0    0.00022   21.1   0.0    1.4  1  DNA_pol3_delta  DNA polymerase III, delta subunit
      0.003   17.3   0.0     0.0063   16.3   0.0    1.4  1  RuvB_N          Holliday junction DNA helicase RuvB P-loop do
     0.0032   17.3   8.2     0.0076   16.0   0.0    2.7  2  SAGA-Tad1       Transcriptional regulator of RNA polII, SAGA,
     0.0037   17.3   0.0      0.018   15.1   0.0    2.2  2  AAA_14          AAA domain
  ------ inclusion threshold ------
      0.017   15.7   0.0      0.047   14.2   0.0    1.8  1  AAA_18          AAA domain
      0.024   14.5   0.0       0.23   11.4   0.0    2.3  2  NTPase_1        NTPase
      0.024   15.0   1.7       0.05   14.0   0.2    2.4  2  AAA_16          AAA ATPase domain
      0.091   12.8   0.0       0.23   11.4   0.0    1.7  1  AAA_5           AAA domain (dynein-related subfamily)
       0.12   12.6   0.0       0.37   10.9   0.0    1.8  1  AAA_33          AAA domain


Domain annotation for each model (and alignments):
>> RFC1  Replication factor RFC1 C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       6.8   8.8e+03      93     120 ..     563     590 ..     554     606 .. 0.54
   2 !  193.5   0.0   1.8e-60   2.3e-57       2     157 .]     686     840 ..     685     840 .. 0.97

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 6.8
                 HS---------HHHHHHTTT--SHHHHH CS
        RFC1  93 vkpLkeegkdgveevielmdeysLtked 120
                 v+ L +  ++ + ++++l+++ +L  ++
  EPX71172.1 563 VDMLVQGTSSDMRQIVNLLSTWKLGSKE 590
                 5555554444466666666666654333 PP

  == domain 2  score: 193.5 bits;  conditional E-value: 1.8e-60
                 HHHHHHHHHHTT.SS-GGGHHHHHHHHTHHHHHTT-EE-SS-----SHHHHHHHHHHHHHHHHHHHTTTTT------HHHHHTTTHHHHHHHHS----- CS
        RFC1   2 sdgDlvdkkirs.eqnWsLlpthavlssvlPaslvrgslegrisFpswLGknSktnKnkRllqelqshlrlktsaskselrldylpllkkklvkpLkee 99 
                 sd+Dlvd++i++ +q+WsL+ptha+ls+v+Pas+v+gs +++i+F+swLG+nSktnK  R+l+e+q h+rlk+sa++ e+r++y+p+l+++l  +L++e
  EPX71172.1 686 SDSDLVDSMIHGsQQHWSLMPTHALLSCVRPASFVAGSGSRQIKFTSWLGNNSKTNKLYRVLREIQLHMRLKVSANSLEVRQHYIPILYESLSMRLARE 784
                 9************************************************************************************************** PP

                 ----HHHHHHTTT--SHHHHHHHHHH-X...XXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        RFC1 100 gkdgveevielmdeysLtkedvdslvelslvkgekkkedplkkidtkvKaaftrkynk 157
                 ++d+++++i+lmdey+L+++d+d+++e++l    +  e+++k+i+t vK+aftrkyn+
  EPX71172.1 785 QADAIPDIIQLMDEYFLNRDDFDAIMEVVLP--ADVGEQLMKGIPTTVKSAFTRKYNS 840
                 ****************************887..4556899****************95 PP

>> BRCT  BRCA1 C Terminus (BRCT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.3   0.0   1.8e-16   2.3e-13       3      79 .]     233     308 ..     231     308 .. 0.97

  Alignments for each domain:
  == domain 1  score: 50.3 bits;  conditional E-value: 1.8e-16
                 TTTTTTEEEEEEESTSSHHHHHHHHHHHHTTCEEESSCSTTSSEEEESSSHSHHHHHHHHHHTTSEEEETHHHHHHH CS
        BRCT   3 ellfhgckfvitgvldnftrdeleelikehGGkvttevskktthlvvgepesrslkylealklnipivheewlldci 79 
                  ++++g++fvitg l++ tr+e+ +l+k +GGkvt++ s+kt++++ ge+ ++  k+++ ++++ip ++e+ l++++
  EPX71172.1 233 DNCLSGLSFVITGILETLTRQEATDLVKQYGGKVTGSPSNKTDFILLGEN-AGPRKVETIKHHKIPAINEDGLFYLL 308
                 689***********************************************.*********************99875 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.0   0.0   1.2e-15   1.6e-12       1     128 [.     409     535 ..     409     539 .. 0.79

  Alignments for each domain:
  == domain 1  score: 48.0 bits;  conditional E-value: 1.2e-15
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSS......STTH.HHHHHHHHHHHHHHTS....TSEEEEEETGGGHHHHHTTCCCHHHHHHHHH CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellsk......yvge.sekkirelfkeakeka....kpsilfiDEidalaksrsgseseeeervvnq 88 
                 vll+GppG+GKT++a+ va+  g+++le+++s+ +sk      ++g   +++++++f++a        +  +l++DEid + + +        +  v q
  EPX71172.1 409 VLLSGPPGIGKTTAAHLVANLEGFDILEFNASDTRSKrlldeqLLGVtDSRSLAGYFSSAHVPVdqskSRLVLIMDEIDGMSSGD--------RGGVGQ 499
                 79*********************************999*****5554156789******95544555345***********7777........888999 PP

                 HHHHHHHTTTSSSTEEEEEEESS..GGGSTHHHHSTTSSEEE CS
         AAA  89 Llteldgvkkkeskvivigatnr..pdkldpallrgRfdrki 128
                 L   +++ k       +i+++n+    kl+p  +   fd ++
  EPX71172.1 500 LNVLIKNTKV-----PIICVCNDrsHPKLKPLDR-TTFDLRF 535
                 9999988765.....7999999844455555555.5565555 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0   8.9e-08   0.00011       5      87 ..     354     447 ..     351     476 .. 0.81

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 8.9e-08
       Rad17   5 enelWfekykPekaeelavhkkkieevkewlka..dvLesrkkr..........iLLisGPsGCgkstvvkvLskelgiklrewlnpvslkepdn 87 
                  n+lW  ky P  ++++   k  + ++++wl+   + L+s+ ++           +L+sGP+G gk+t+ + ++   g+++ e+ n+   ++   
  EPX71172.1 354 SNQLWTTKYAPTSLKDICGNKGIVLKLQKWLQDwpKNLKSNFRKpgpdglglykAVLLSGPPGIGKTTAAHLVANLEGFDILEF-NASDTRSKRL 447
                 689****************************9533788888777899999988889******************9999999886.4444355544 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.0   1.8e-07   0.00023       8     112 ..     409     503 ..     406     517 .. 0.83

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 1.8e-07
      AAA_22   8 lvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelkaerlsseellealeqalraravielliiDEaqhlrs. 105
                 +++ G++G+GKTt +  +++           + ++++++++   s + l ++ll  +++       s+  +++  +  +++ + + +li DE++ ++s 
  EPX71172.1 409 VLLSGPPGIGKTTAAHLVANLE---------GFDILEFNASDTRSKRLLDEQLLGVTDS------RSLAGYFSSAHVPVDQSKSRLVLIMDEIDGMSSg 492
                 7899****************98.........**********************999995......47779999999999999999*********99524 PP

      AAA_22 106 ....eealeeL 112
                       +l+ L
  EPX71172.1 493 drggVGQLNVL 503
                 53445555444 PP

>> DNA_pol3_delta  DNA polymerase III, delta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0   1.7e-07   0.00022      57     169 ..     476     581 ..     474     586 .. 0.86

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 1.7e-07
                     SEEEEEEE--.....TT-S-TTHHHHHHHHTTT--SSEEEEEEES.S--HHHHHHHHHTTTEEEEEE----TTTHHHHHHHHHHHTT-EE-HHHH CS
  DNA_pol3_delta  57 dkrivvlknpklltkesklnekllkeLeeylsnlpedtlLiliapkklderkklvklLkkkatvveaktlkeeelkkwiqkraqelglkiekeal 151
                     ++r+v++++   +   s+ +   + +L+ +++n  +++ +i +++   d+    +k L++++  +++ +++ + l+  i ++a ++glk++++a+
      EPX71172.1 476 KSRLVLIMDE--IDGMSSGDRGGVGQLNVLIKN--TKVPIICVCN---DRSHPKLKPLDRTTFDLRFRRPDANSLRSRIMSIAYREGLKLSPQAV 563
                     6777777777..666777788888889999998..7888888888...6666699**************************************** PP

                     HHHHHHHTT-HHHHHHHH CS
  DNA_pol3_delta 152 elLlelvennlsaikqel 169
                     ++L++ +++++++i + l
      EPX71172.1 564 DMLVQGTSSDMRQIVNLL 581
                     ************998765 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   4.9e-06    0.0063      35      57 ..     408     430 ..     404     444 .. 0.87

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 4.9e-06
      RuvB_N  35 hvllyGpPGlGkttlakiiakel 57 
                  vll+GpPG+Gktt a+++a+  
  EPX71172.1 408 AVLLSGPPGIGKTTAAHLVANLE 430
                 59*****************9865 PP

>> SAGA-Tad1  Transcriptional regulator of RNA polII, SAGA, subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   6.7      0.56   7.2e+02      85     148 ..      29     124 ..       6     203 .. 0.52
   2 !   16.0   0.0   5.9e-06    0.0076     186     228 ..     538     578 ..     499     583 .. 0.89

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.56
   SAGA-Tad1  85 satakkkks..slkkspkksrsgdsqeerlkkrvmslpprdrkrlkaitkeagvlaee................................sskpki.sv 148
                 s+++++kk+  +l+  ++ ++ ++++ +  +k+v++ ++ +r++++ +++ ++  a++                                s  +ki   
  EPX71172.1  29 SVNSSQKKKriVLSDDESTDVDSQPASNGSTKEVSPSTQ-KRQKVNVAPSATKSQATSdekpnisvedssdvladdhpmsspvvsiprtsS--QKIkAP 124
                 222222222453333333333333344445555554444.555555555444422222123333333344444444444444444444321..222222 PP

  == domain 2  score: 16.0 bits;  conditional E-value: 5.9e-06
   SAGA-Tad1 186 pdtdsLrkRmekiaeeeGLvggvsadcaellnlaldvyLKnli 228
                 pd +sLr+R+ +ia+ eGL  + s +++++l +++ + +++++
  EPX71172.1 538 PDANSLRSRIMSIAYREGL--KLSPQAVDMLVQGTSSDMRQIV 578
                 9******************..************9998888887 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   1.4e-05     0.018       3      75 ..     407     488 ..     405     512 .. 0.78
   2 ?   -2.2   0.0       3.1     4e+03      63     117 ..     740     793 ..     727     806 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.4e-05
      AAA_14   3 kilvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpe........kllelilek.lke....ekktylflDEiqe 75 
                 k+++++G+  +GKTt ++ +++ +     +il++n  d r k+l d++        +l  ++ +  + +    + + +l++DEi  
  EPX71172.1 407 KAVLLSGPPGIGKTTAAHLVANLE---GFDILEFNASDTRSKRLLDEQllgvtdsrSLAGYFSSAhV-PvdqsKSRLVLIMDEIDG 488
                 899*************98887554...499********99988776655555555566666666542.25666778889****975 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 3.1
      AAA_14  63 ekktylflDEiqevpewekalkslvdegknldvivtGSnskllskeiatslagrv 117
                  +k y +l Eiq   +++   +sl  ++ ++  i+  S+s+ l +e a+   + +
  EPX71172.1 740 TNKLYRVLREIQLHMRLKVSANSLEVRQ-HYIPILYESLSMRLAREQADAIPDII 793
                 4788888889999888888888887777.67778888888888888877766655 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   3.7e-05     0.047       1      35 [.     409     446 ..     409     494 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3.7e-05
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf...gvnlrdvaken 35 
                 +ll+G+pG GKtt a+ +++++gf    +n +d+ +++
  EPX71172.1 409 VLLSGPPGIGKTTAAHLVANLEGFdilEFNASDTRSKR 446
                 799*****************999999955555444333 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00018      0.23       2      22 ..     409     429 ..     408     446 .. 0.84
   2 ?    0.1   0.0      0.52   6.7e+02      95     139 ..     477     521 ..     461     534 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00018
                 EEEE--TTSSHHHHHHHHHHH CS
    NTPase_1   2 vfiTGppGvGKtTlvkkvlel 22 
                 v+++GppG+GKtT  + v++l
  EPX71172.1 409 VLLSGPPGIGKTTAAHLVANL 429
                 789************999874 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.52
                 HH-EEEE---STTGGG-HHHHHHHHHHHT.TTSEEEEE--SS--SH CS
    NTPase_1  95 eadviviDEiGkmElkskkfkeaveevLk.sekpvlavihrrkdla 139
                 +  v+++DEi  m    +    +++ ++k +++p++ v   r+ ++
  EPX71172.1 477 SRLVLIMDEIDGMSSGDRGGVGQLNVLIKnTKVPIICVCNDRS-HP 521
                 33499******9*999999999999999988889999988885.33 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.1       7.5   9.7e+03      89     116 ..     323     350 ..     301     360 .. 0.64
   2 ?   14.0   0.2   3.9e-05      0.05      24      45 ..     404     427 ..     389     495 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 7.5
      AAA_16  89 aesaeleawrekleealaavpelagaea 116
                 a++a++e+ ++k++e++a  ++ a+a++
  EPX71172.1 323 AAQAKREQEDAKIRETAARLAPEAPAQK 350
                 3344666666666666665555555555 PP

  == domain 2  score: 14.0 bits;  conditional E-value: 3.9e-05
      AAA_16  24 p..elvllsGesGvGKsslvrell 45 
                 +   +vllsG++G+GK++ +  ++
  EPX71172.1 404 GlyKAVLLSGPPGIGKTTAAHLVA 427
                 36689*************998887 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00018      0.23       2      47 ..     409     453 ..     408     511 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00018
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B-- CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrrei 47 
                 vlL GppG+gK++ a  +a + +  +++ + ++ t+++ l+ +  +
  EPX71172.1 409 VLLSGPPGIGKTTAAHLVANLEGFDILEFNASD-TRSKRLLDEQLL 453
                 89*************999998888777766554.555555555444 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00029      0.37       2      38 ..     409     448 ..     409     475 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00029
      AAA_33   2 vllvGlpGsGKstlaerllkklg...avllssdtlrrrlf 38 
                 vll G+pG GK+t a+ +++ +g    ++ +sdt ++rl 
  EPX71172.1 409 VLLSGPPGIGKTTAAHLVANLEGfdiLEFNASDTRSKRLL 448
                 6899***********9998777754444455666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (930 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       996  (0.0555525); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        66  (0.00368119); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.80u 0.29s 00:00:01.09 Elapsed: 00:00:00.46
# Mc/sec: 6074.88
//
Query:       EPX71173.1  [L=525]
Description: membrane exchange factor subunit Sat1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.8e-75  252.6   0.2    2.6e-74  250.9   0.1    1.8  2  Rgp1           Rgp1
    0.00014   21.9   0.7    0.00047   20.2   0.0    2.2  3  Arrestin_N     Arrestin (or S-antigen), N-terminal domain
    0.00063   19.3   0.0        1.3    8.5   0.0    3.3  3  Spo0M          SpoOM protein
     0.0029   18.1   0.0       0.83   10.1   0.0    3.1  2  Arrestin_C     Arrestin (or S-antigen), C-terminal domain
  ------ inclusion threshold ------
       0.72    9.8   5.7      0.097   12.6   1.6    1.6  2  RPN2_C         26S proteasome regulatory subunit RPN2 C-termi


Domain annotation for each model (and alignments):
>> Rgp1  Rgp1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.25   8.8e+02     311     334 ..       8      31 ..       6      36 .. 0.85
   2 !  250.9   0.1   7.2e-78   2.6e-74       1     414 [.      38     432 ..      38     434 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.25
        Rgp1 311 ltLskpaYrlgetitlvidfsdae 334
                 +++ k+a+++ge+ ++++++++++
  EPX71173.1   8 IKCLKEAVQVGESFDCIVKITNSK 31 
                 67889***************9974 PP

  == domain 2  score: 250.9 bits;  conditional E-value: 7.2e-78
        Rgp1   1 tLlmgYvQisGsftlDgslineskfeevkrkavvg.gs.ggvvglekskrssgllgglgwgsiseslgellggnelstlkemresaesksiPllstpqs 97 
                 ++l++Y+ i+G++ lD++l++ s+fe+v+r++++  ++ +g+v+++k ++ +++      +++s  +g+llg n++stl+e++e++e +++P+++t+++
  EPX71173.1  38 QILLCYASIHGEMYLDPTLVRVSEFEDVQRQGLLNkRTmSGLVHIPKASTGNSVS-----NALSGMFGSLLGLNQASTLNEASEQQEENATPVYMTRPD 131
                 589******************************8765568999999655444222.....2348899999***************************** PP

        Rgp1  98 lLfvdLtLaPGEsksFefsfkLPkdLpPsyrgkaikisYsLviGtqr...........pggak....qqvksvevPirvlpsvnssgeqlghdLmspyi 181
                 +L vd+tLaPGEs++F+ + k+P + +Psy+g a++++++Lv+G+q            +        ++ ++ e+P+  +++v+  g  +++d+++p+ 
  EPX71173.1 132 ILGVDMTLAPGESQWFRMQRKIPLKTVPSYKGVAFQFQHKLVVGAQFpdhnacveyefE---VdllpNSKQRPELPLGKFSQVSVAGPDVFADVHKPI- 226
                 ***********************************************766655554431...144555556**************************7. PP

        Rgp1 182 llrdearvkevksrkkssssskekkkskskkkseksesskedFlkyveelleneseskdieellspqlevqfeeeedseeneesrrksvvskesssvke 280
                 +  ++a+vke +          e   +  +++ e+s + k+ F +++  ll+ + ++   ++  ++++++  e+ee++ee+e        ++e +  ke
  EPX71173.1 227 FDFEPAKVKEQS--------VGE---TWLEEEREDSGNGKKRFEEFLATLLNGDGSAY--AGEEEREMTKRNEKEEEEEEEE--------EEELE-KKE 303
                 ********9888........222...35666666666789999999999999998775..4555555555433333333332........22333.689 PP

        Rgp1 281 aidllilrsqlasnlqksyeIarngkrvAvltLskpaYrlgetitlvidfsdaeklkvyavtatLesfEkidpslalrseasikrvtrkvvaesseitl 379
                  i+ll+++++l  +++++yeIa++++ +++  ++k++Y  ge++ l ++        + +++++Les+E+i p++++r++++++rvtr+++ + s+ ++
  EPX71173.1 304 RIELLKRQETL-GRMTTKYEIANQQRLICRFLFNKSRYVAGEMMLLEVNGMGR---AIRQLHVQLESVERIVPKIRMRNSTNTERVTRRIWTKMSR-SV 397
                 ***********.899**********************************9995...6*************************************99.77 PP

        Rgp1 380 farervsfkltipksatpqFkTsgvqlkWllrleF 414
                 +  e++sf+++ip++++++F+T+ + ++++lr+e+
  EPX71173.1 398 YGLENFSFSMSIPEECPTTFETQQFGVEHFLRIEL 432
                 8888*****************************97 PP

>> Arrestin_N  Arrestin (or S-antigen), N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.8   6.5e+03      87     114 ..     139     167 ..     122     179 .. 0.72
   2 ?   -2.9   0.3       1.7   6.2e+03      46      71 ..     275     300 ..     266     320 .. 0.47
   3 !   20.2   0.0   1.3e-07   0.00047      82     127 ..     388     436 ..     354     460 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.8
                 HHH-TTEE.EEEE---TTS--SECSGEEE CS
  Arrestin_N  87 LpkGehaf.pFsfelPknlpsSfeGkagg 114
                 L  Ge ++     ++P + ++S +G a +
  EPX71173.1 139 LAPGESQWfRMQRKIPLKTVPSYKGVAFQ 167
                 55566555123346999999999987655 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.7
                 SSSSTTTTCCCEEEEEEEEEEEEEST CS
  Arrestin_N  46 gweesevagktfrkdltlkkkqeyle 71 
                 g ee+e +++ ++++++ ++++e le
  EPX71173.1 275 GEEEREMTKRNEKEEEEEEEEEEELE 300
                 44444444333333333333333222 PP

  == domain 3  score: 20.2 bits;  conditional E-value: 1.3e-07
                 HHHHHHHH...-TTEEEEEE---TTS--SECSGEEEEEEEEEEEEECCC CS
  Arrestin_N  82 dsqekLpk...GehafpFsfelPknlpsSfeGkaggvrYevkvtldrpw 127
                 ++ +k+++   G   f+Fs+ +P+++p++fe ++ gv+++++++l r  
  EPX71173.1 388 RIWTKMSRsvyGLENFSFSMSIPEECPTTFETQQFGVEHFLRIELLRDS 436
                 55566777788999*****************************998876 PP

>> Spo0M  SpoOM protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.015        55      14      50 ..       5      41 ..       2      65 .. 0.89
   2 ?    3.5   0.0     0.012        44      57     116 ..     113     173 ..     105     181 .. 0.77
   3 !    8.5   0.0   0.00036       1.3      85     125 ..     398     438 ..     335     452 .. 0.74

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.015
                EEEEEES-SEE-TT-EEEEEEEEE--SS-EEEEEEEE CS
       Spo0M 14 kVdtvLekeevrpGetlegevevkGGsveqeieeiel 50
                +V+ +  ke+v++Ge+++  v+++  +++q++ +i l
  EPX71173.1  5 QVEIKCLKEAVQVGESFDCIVKITNSKAAQSVLQILL 41
                677777899***********************99977 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.012
                 EEEETTEEEEEEEEEEEEEEE-.-EEE-TT-EEEEEEEEE--TT-----TT--EEEEEEEE CS
       Spo0M  57 ekeeddkeveetvelarvrvae.aftiepgeereipfelelpletPitlggakvwleTeld 116
                 e++e+++e ++ v ++r ++ +  +t++pge++ ++++ ++pl+t  + +g++  ++ +l 
  EPX71173.1 113 EASEQQEENATPVYMTRPDILGvDMTLAPGESQWFRMQRKIPLKTVPSYKGVAFQFQHKLV 173
                 455566666777777777766549********************97777777777776665 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.00036
                 T-EEEEEEEEE--TT-----TT--EEEEEEEEESSS--EEE CS
       Spo0M  85 geereipfelelpletPitlggakvwleTeldiagavDpgD 125
                    +++ f++++p e+P t+++++ ++e  l i+   D + 
  EPX71173.1 398 YGLENFSFSMSIPEECPTTFETQQFGVEHFLRIELLRDSSE 438
                 4557899**************************99888775 PP

>> Arrestin_C  Arrestin (or S-antigen), C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.021        75      63     115 ..     114     179 ..       2     196 .. 0.47
   2 !   10.1   0.0   0.00023      0.83       9     112 ..     333     432 ..     325     443 .. 0.68

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.021
                 EEEEEE---.................B-TTEE.EEEEEEE.----B-----S---EEEEEEEEEEEEEEE CS
  Arrestin_C  63 vaksdsvkv.................tsaakdkletevelqiPeeltpssarnvelikvsYklkvkltls 115
                  ++++ ++                  ++++++ +   ++ +iP ++ ps   ++ + + ++kl v +++ 
  EPX71173.1 114 ASEQQEENAtpvymtrpdilgvdmtlAPGESQWFR--MQRKIPLKTVPSY--KGVAFQFQHKLVVGAQFP 179
                 33322222233444455555555533333343333..6666776666666..777777777777777776 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00023
                 EEES-SEEETT--EEEEEEEEE-SSSEEEEEEEEEEEEEEEESS....SEEEEEEEEEEEEE---..B-TTEE.EEEEEEE.----B-----S---EEE CS
  Arrestin_C   9 aslpkkgyvpGetipvtvkidndskkkvkkikvslvqhvdvcafnr..snkkeknvvaksdsvkv..tsaakdkletevelqiPeeltpssarnvelik 103
                   ++k+ yv Ge + ++v   n  ++ ++++ v+l+   +++ + r  +++++++v    +  k   ++   +++   ++++iPee + +   ++++  
  EPX71173.1 333 FLFNKSRYVAGEMMLLEV---NGMGRAIRQLHVQLESVERIVPKIRmrNSTNTERVT-RRIWTKMsrSVYGLENFS--FSMSIPEECPTTF--ETQQFG 423
                 556666666666655554...566788999999999999999998885444444444.444444412456666666..999***5555555..9***** PP

                 EEEEEEEEE CS
  Arrestin_C 104 vsYklkvkl 112
                 v+++l+++l
  EPX71173.1 424 VEHFLRIEL 432
                 ******998 PP

>> RPN2_C  26S proteasome regulatory subunit RPN2 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   1.6   2.7e-05     0.097      68     119 ..     274     330 ..     203     341 .. 0.72
   2 ?   -3.8   0.1       2.9     1e+04      79      79 ..     456     456 ..     436     492 .. 0.48

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 2.7e-05
                 -------------------------------.....--SS----SSEEEEESSSB-- CS
      RPN2_C  68 eekeedkmdvdeekeekekkekekkekekee.....ekkkkekektfekleNpaRVl 119
                 + +ee +m + +ekee+e++e+e++ ++ke+     ++++  + +t++++ N  R +
  EPX71173.1 274 AGEEEREMTKRNEKEEEEEEEEEEELEKKERiellkRQETLGRMTTKYEIANQQRLI 330
                 345556666666555555555555555544477887888888999999999999975 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 2.9
                 - CS
      RPN2_C  79 e 79 
                  
  EPX71173.1 456 G 456
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (525 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1671  (0.093201); expected 358.6 (0.02)
Passed bias filter:                      834  (0.0465168); expected 358.6 (0.02)
Passed Vit filter:                        96  (0.00535445); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.71u 0.32s 00:00:01.03 Elapsed: 00:00:00.47
# Mc/sec: 3341.06
//
Query:       EPX71174.1  [L=1103]
Description: transcriptional corepressor Ssn6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-46  153.6  42.3    2.4e-08   33.5   0.1   10.7 10  TPR_1     Tetratricopeptide repeat
    7.3e-41  135.0  38.9    7.2e-06   25.7   0.0   10.2 10  TPR_2     Tetratricopeptide repeat
    6.7e-32  107.0  29.3    1.8e-05   24.6   0.1   10.6 10  TPR_8     Tetratricopeptide repeat
    9.7e-26   88.3  23.2     0.0094   16.3   0.1   10.7 10  TPR_17    Tetratricopeptide repeat
    7.7e-23   79.2  21.8      0.004   17.8   0.1    9.1 10  TPR_14    Tetratricopeptide repeat
    2.2e-21   76.2  20.0    3.2e-05   24.5   1.5    7.1  8  TPR_16    Tetratricopeptide repeat
    7.6e-21   73.5  35.9    4.8e-06   26.1   1.2    9.0  9  TPR_11    TPR repeat
    2.7e-20   72.7  18.8    0.00079   19.9   1.3    6.9  7  TPR_19    Tetratricopeptide repeat
    1.8e-18   66.6  33.5     0.0002   21.6   2.4    8.2  8  TPR_12    Tetratricopeptide repeat
    5.9e-16   58.0  28.7      0.015   15.9   1.0    9.6 10  TPR_6     Tetratricopeptide repeat
    8.2e-14   51.5  15.7     0.0019   18.3   0.1    5.9  5  TPR_9     Tetratricopeptide repeat
    1.4e-11   43.6  28.8      0.067   13.3   0.2   10.0 10  TPR_7     Tetratricopeptide repeat
      2e-07   31.1  19.3    4.8e-07   29.9   2.8    4.2  4  ANAPC3    Anaphase-promoting complex, cyclosome, subunit 3
    5.2e-06   25.9  13.5        1.6    7.8   0.3    6.2  5  TPR_15    Tetratricopeptide repeat
     0.0003   21.0   1.2        4.6    7.6   0.1    4.8  4  TPR_20    Tetratricopeptide repeat
     0.0027   16.8   1.3          1    8.3   0.0    2.6  4  ChAPs     ChAPs (Chs5p-Arf1p-binding proteins)
  ------ inclusion threshold ------
       0.39   11.1   7.7        9.2    6.7   0.1    3.6  3  BTAD      Bacterial transcriptional activator domain


Domain annotation for each model (and alignments):
>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.3   3.5e-06    0.0037       2      32 ..     376     406 ..     375     408 .. 0.96
   2 !   11.3   0.0   0.00023      0.24       8      33 ..     416     441 ..     410     442 .. 0.89
   3 !   14.1   0.3   2.8e-05      0.03       2      29 ..     444     471 ..     443     475 .. 0.93
   4 !   25.0   0.0     1e-08   1.1e-05       1      34 []     479     512 ..     479     512 .. 0.96
   5 !   12.1   0.1   0.00013      0.13       2      25 ..     517     540 ..     517     543 .. 0.92
   6 !   24.1   0.2     2e-08   2.1e-05       2      33 ..     554     585 ..     553     586 .. 0.91
   7 ?    1.2   0.1      0.36   3.8e+02      18      31 ..     608     621 ..     606     624 .. 0.85
   8 !   23.4   2.8   3.4e-08   3.6e-05       1      31 [.     625     655 ..     625     658 .. 0.92
   9 !   33.5   0.1   2.3e-11   2.4e-08       3      32 ..     661     690 ..     659     691 .. 0.96
  10 !   14.2   0.5   2.8e-05      0.03       2      34 .]     694     727 ..     693     727 .. 0.86

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 3.5e-06
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHST CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALelnP 32 
                 +a+ ++G++     + d+Al +ye AL+ nP
  EPX71174.1 376 EAWLQIGHLAELYDDSDKALTAYEAALRQNP 406
                 79****************************9 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 0.00023
                 HHHHHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1   8 GnayfklgkydeAleyyekALelnPn 33 
                 + ++++ +++  A+eyy+  L l+P+
  EPX71174.1 416 ATLLRNREQFLLAIEYYQTILDLDPK 441
                 66788999999**************7 PP

  == domain 3  score: 14.1 bits;  conditional E-value: 2.8e-05
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALe 29 
                 +++  lG++y+   ++  A  +y++AL 
  EPX71174.1 444 EIWSALGHCYLMRDDLSRAYSAYRQALY 471
                 689***********************96 PP

  == domain 4  score: 25.0 bits;  conditional E-value: 1e-08
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   1 akalynlGnayfklgkydeAleyyekALelnPnn 34 
                 +k +y++G +y + g ++ A+e++ ++L+ +Pn+
  EPX71174.1 479 PKLWYGIGILYDRYGSHEHAEEAFTQCLRMDPNF 512
                 589*****************************97 PP

  == domain 5  score: 12.1 bits;  conditional E-value: 0.00013
                 HHHHHHHHHHHHTT-HHHHHHHHH CS
       TPR_1   2 kalynlGnayfklgkydeAleyye 25 
                 +++++lG +y ++ k+ + le ++
  EPX71174.1 517 EIYFRLGIIYKQQHKFAQSLELFR 540
                 58*******************996 PP

  == domain 6  score: 24.1 bits;  conditional E-value: 2e-08
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALelnPn 33 
                 ++++++G++y ++++y+ A e+ye++L   Pn
  EPX71174.1 554 DIYFQIGHVYEQQKEYKLAKEAYERVLAETPN 585
                 68*************************87766 PP

  == domain 7  score: 1.2 bits;  conditional E-value: 0.36
                 HHHHHHHHHHHHHS CS
       TPR_1  18 deAleyyekALeln 31 
                 d A++y  k Le +
  EPX71174.1 608 DLAIQYLTKSLEAD 621
                 78*********977 PP

  == domain 8  score: 23.4 bits;  conditional E-value: 3.4e-08
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHS CS
       TPR_1   1 akalynlGnayfklgkydeAleyyekALeln 31 
                 a+++y +G +y  ++ky++A e+y++A+  +
  EPX71174.1 625 AQSWYLIGRCYVAQQKYNKAYEAYQQAVYRD 655
                 789************************9876 PP

  == domain 9  score: 33.5 bits;  conditional E-value: 2.3e-11
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHST CS
       TPR_1   3 alynlGnayfklgkydeAleyyekALelnP 32 
                  ++ +G++y++ ++y++Al++y++A++lnP
  EPX71174.1 661 FWCSIGVLYYQINQYQDALDAYSRAIRLNP 690
                 5****************************9 PP

  == domain 10  score: 14.2 bits;  conditional E-value: 2.8e-05
                 HHHHHHHHHHHHT.T-HHHHHHHHHHHHHHSTTH CS
       TPR_1   2 kalynlGnayfkl.gkydeAleyyekALelnPnn 34 
                 +++y lG +y +  ++  +Al++y++A el+P n
  EPX71174.1 694 EVWYDLGTLYESChNQISDALDAYQRAAELDPAN 727
                 68999999998864789***************65 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.6   4.5e-05     0.047       2      32 ..     376     406 ..     375     408 .. 0.95
   2 !    8.6   0.0     0.002       2.2       8      33 ..     416     441 ..     410     442 .. 0.88
   3 !   14.4   0.4   2.9e-05     0.031       2      28 ..     444     470 ..     443     475 .. 0.93
   4 !   18.6   0.0   1.3e-06    0.0014       1      33 [.     479     511 ..     479     512 .. 0.96
   5 !   12.7   0.2    0.0001      0.11       2      27 ..     517     542 ..     516     545 .. 0.91
   6 !   24.0   0.2   2.4e-08   2.5e-05       3      34 .]     555     586 ..     553     586 .. 0.96
   7 ?   -0.1   0.0       1.3   1.3e+03      18      33 ..     608     623 ..     606     624 .. 0.85
   8 !   20.3   2.2   3.8e-07    0.0004       1      31 [.     625     655 ..     625     658 .. 0.90
   9 !   25.7   0.0   6.8e-09   7.2e-06       3      32 ..     661     690 ..     659     692 .. 0.94
  10 !   17.0   0.1   4.2e-06    0.0044       2      34 .]     694     727 ..     693     727 .. 0.95

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 4.5e-05
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleldP 32 
                 ea+ ++G +++  +d ++Al a+e+Al+ +P
  EPX71174.1 376 EAWLQIGHLAELYDDSDKALTAYEAALRQNP 406
                 79****************************9 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.002
       TPR_2   8 GlayyklgdyeeAleafekAleldPn 33 
                 + +++++ ++  A+e+++  l ldP+
  EPX71174.1 416 ATLLRNREQFLLAIEYYQTILDLDPK 441
                 67889999999**************6 PP

  == domain 3  score: 14.4 bits;  conditional E-value: 2.9e-05
       TPR_2   2 ealynlGlayyklgdyeeAleafekAl 28 
                 e++ +lG +y+ ++d+ +A  a+++Al
  EPX71174.1 444 EIWSALGHCYLMRDDLSRAYSAYRQAL 470
                 79************************9 PP

  == domain 4  score: 18.6 bits;  conditional E-value: 1.3e-06
       TPR_2   1 aealynlGlayyklgdyeeAleafekAleldPn 33 
                 ++++y +G +y + g +e A+eaf ++l+ dPn
  EPX71174.1 479 PKLWYGIGILYDRYGSHEHAEEAFTQCLRMDPN 511
                 589*****************************9 PP

  == domain 5  score: 12.7 bits;  conditional E-value: 0.0001
       TPR_2   2 ealynlGlayyklgdyeeAleafekA 27 
                 e++++lG +y ++ ++++ le+f+  
  EPX71174.1 517 EIYFRLGIIYKQQHKFAQSLELFRYI 542
                 79*********************865 PP

  == domain 6  score: 24.0 bits;  conditional E-value: 2.4e-08
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldPnn 34 
                 +++++G +y+++++y+ A+ea+e++l+  Pn+
  EPX71174.1 555 IYFQIGHVYEQQKEYKLAKEAYERVLAETPNH 586
                 79****************************97 PP

  == domain 7  score: -0.1 bits;  conditional E-value: 1.3
       TPR_2  18 eeAleafekAleldPn 33 
                 + A++++ k+le d +
  EPX71174.1 608 DLAIQYLTKSLEADDT 623
                 67**********9976 PP

  == domain 8  score: 20.3 bits;  conditional E-value: 3.8e-07
       TPR_2   1 aealynlGlayyklgdyeeAleafekAleld 31 
                 a+ +y +G++y ++++y++A ea+++A+  d
  EPX71174.1 625 AQSWYLIGRCYVAQQKYNKAYEAYQQAVYRD 655
                 678************************8665 PP

  == domain 9  score: 25.7 bits;  conditional E-value: 6.8e-09
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldP 32 
                  ++ +G +yy+ ++y++Al+a+ +A++l+P
  EPX71174.1 661 FWCSIGVLYYQINQYQDALDAYSRAIRLNP 690
                 7999*************************9 PP

  == domain 10  score: 17.0 bits;  conditional E-value: 4.2e-06
       TPR_2   2 ealynlGlayyklgdy.eeAleafekAleldPnn 34 
                 e++y lG +y+   +   +Al+a+++A eldP n
  EPX71174.1 694 EVWYDLGTLYESCHNQiSDALDAYQRAAELDPAN 727
                 89******************************86 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.2   0.00051      0.54       2      32 ..     376     406 ..     375     408 .. 0.95
   2 !    8.8   0.0    0.0019         2       2      33 ..     410     441 ..     409     442 .. 0.91
   3 ?    5.4   0.2     0.024        25       2      28 ..     444     470 ..     443     471 .. 0.94
   4 !   19.6   0.0   6.9e-07   0.00073       2      33 ..     480     511 ..     479     512 .. 0.96
   5 ?    3.6   0.1     0.093        98       2      24 ..     517     539 ..     517     540 .. 0.87
   6 !   24.6   0.1   1.7e-08   1.8e-05       2      33 ..     554     585 ..     553     586 .. 0.92
   7 ?    3.1   0.1      0.13   1.4e+02      16      32 ..     606     622 ..     587     624 .. 0.85
   8 !   21.2   1.1     2e-07   0.00021       1      31 [.     625     655 ..     625     658 .. 0.94
   9 !   15.6   0.0   1.3e-05     0.014       3      32 ..     661     690 ..     659     691 .. 0.96
  10 !    7.2   0.1    0.0063       6.6       2      34 .]     694     727 ..     693     727 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00051
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldp 32 
                 ea++++g++ +   d ++A  +ye al+ +p
  EPX71174.1 376 EAWLQIGHLAELYDDSDKALTAYEAALRQNP 406
                 79*************************9888 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.0019
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldpd 33 
                 +a+++ + ++++ +++  A+eyy+  l+ldp+
  EPX71174.1 410 PAMLQVATLLRNREQFLLAIEYYQTILDLDPK 441
                 67788899999********************8 PP

  == domain 3  score: 5.4 bits;  conditional E-value: 0.024
                 CHHHHHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekal 28 
                 e++  lg++yl   d+  A ++y++al
  EPX71174.1 444 EIWSALGHCYLMRDDLSRAYSAYRQAL 470
                 7899**********************8 PP

  == domain 4  score: 19.6 bits;  conditional E-value: 6.9e-07
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldpd 33 
                 +++y +g +y+  g +e A+e++ ++l++dp+
  EPX71174.1 480 KLWYGIGILYDRYGSHEHAEEAFTQCLRMDPN 511
                 78*****************************8 PP

  == domain 5  score: 3.6 bits;  conditional E-value: 0.093
                 CHHHHHHHHHHHTT-HHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyy 24 
                 e+y++lg iy+++ ++ ++ e +
  EPX71174.1 517 EIYFRLGIIYKQQHKFAQSLELF 539
                 68**********99999988877 PP

  == domain 6  score: 24.6 bits;  conditional E-value: 1.7e-08
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldpd 33 
                 ++y+++g++y+++++y+ Ake+ye++l   p+
  EPX71174.1 554 DIYFQIGHVYEQQKEYKLAKEAYERVLAETPN 585
                 79************************988777 PP

  == domain 7  score: 3.1 bits;  conditional E-value: 0.13
                 -HHHHHHHHHHHHHHHH CS
       TPR_8  16 dyeeAkeyyekaleldp 32 
                 + + A++y+ k le+d 
  EPX71174.1 606 NQDLAIQYLTKSLEADD 622
                 6799**********986 PP

  == domain 8  score: 21.2 bits;  conditional E-value: 2e-07
                 CCHHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
       TPR_8   1 aeayynlgsiylklgdyeeAkeyyekaleld 31 
                 a+++y++g++y  +++y++A e+y++a++ d
  EPX71174.1 625 AQSWYLIGRCYVAQQKYNKAYEAYQQAVYRD 655
                 799*************************987 PP

  == domain 9  score: 15.6 bits;  conditional E-value: 1.3e-05
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyekaleldp 32 
                  ++ +g +y + ++y+ A  +y +a++l+p
  EPX71174.1 661 FWCSIGVLYYQINQYQDALDAYSRAIRLNP 690
                 69***************************9 PP

  == domain 10  score: 7.2 bits;  conditional E-value: 0.0063
                 CHHHHHHHHHHHT.T-HHHHHHHHHHHHHHHHH. CS
       TPR_8   2 eayynlgsiylkl.gdyeeAkeyyekaleldpdn 34 
                 e++y lg +y++  +++  A  +y++a eldp+n
  EPX71174.1 694 EVWYDLGTLYESChNQISDALDAYQRAAELDPAN 727
                 89********66549999**************86 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.1   0.00038       0.4       1      33 [.     397     429 ..     397     430 .. 0.92
   2 !   12.0   0.0    0.0002      0.21       1      32 [.     431     462 ..     431     463 .. 0.95
   3 ?    6.6   0.1     0.011        11       2      27 ..     466     493 ..     465     500 .. 0.80
   4 ?    4.9   0.0     0.039        41       2      32 ..     502     535 ..     501     537 .. 0.87
   5 ?    1.2   0.0      0.59   6.2e+02      14      34 .]     554     574 ..     553     574 .. 0.92
   6 !   12.2   0.0   0.00017      0.18       1      24 [.     575     598 ..     575     612 .. 0.85
   7 !   12.9   0.3   0.00011      0.11       2      32 ..     614     644 ..     613     646 .. 0.92
   8 !   14.4   0.1   3.6e-05     0.038       1      33 [.     647     679 ..     647     680 .. 0.96
   9 !   16.3   0.1   8.9e-06    0.0094       2      27 ..     682     707 ..     681     714 .. 0.86
  10 ?    3.7   0.0     0.091        96       1      14 [.     716     729 ..     716     734 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00038
      TPR_17   1 lylkaleldPnnadaynnLAelllknGdlmtAr 33 
                 +y+ al+++P + +a+ + A+ll+++ ++  A+
  EPX71174.1 397 AYEAALRQNPYSIPAMLQVATLLRNREQFLLAI 429
                 5**************************987776 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 0.0002
      TPR_17   1 lylkaleldPnnadaynnLAelllknGdlmtA 32 
                 +y+  l+ldP+  + +  L+ ++l++ dl +A
  EPX71174.1 431 YYQTILDLDPKQGEIWSALGHCYLMRDDLSRA 462
                 69*************************99887 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.011
      TPR_17   2 ylkalel..dPnnadaynnLAelllknG 27 
                 y++al +  dP+n+++++  + l+ + G
  EPX71174.1 466 YRQALYHlkDPKNPKLWYGIGILYDRYG 493
                 667777777**************98655 PP

  == domain 4  score: 4.9 bits;  conditional E-value: 0.039
      TPR_17   2 ylkaleldPnn...adaynnLAelllknGdlmtA 32 
                 ++++l+ dPn     + y+ L+ ++++++++++ 
  EPX71174.1 502 FTQCLRMDPNFekvNEIYFRLGIIYKQQHKFAQS 535
                 78999999999999999*********99988775 PP

  == domain 5  score: 1.2 bits;  conditional E-value: 0.59
      TPR_17  14 daynnLAelllknGdlmtArq 34 
                 d y++ + +++++++++ A++
  EPX71174.1 554 DIYFQIGHVYEQQKEYKLAKE 574
                 68**************99985 PP

  == domain 6  score: 12.2 bits;  conditional E-value: 0.00017
      TPR_17   1 lylkaleldPnnadaynnLAelll 24 
                 +y+++l+  Pn+a+++++L++l +
  EPX71174.1 575 AYERVLAETPNHAKVLQQLGWLCH 598
                 5********************976 PP

  == domain 7  score: 12.9 bits;  conditional E-value: 0.00011
      TPR_17   2 ylkaleldPnnadaynnLAelllknGdlmtA 32 
                 ++k+le d ++a ++++ ++++  + ++ +A
  EPX71174.1 614 LTKSLEADDTDAQSWYLIGRCYVAQQKYNKA 644
                 689********************99999888 PP

  == domain 8  score: 14.4 bits;  conditional E-value: 3.6e-05
      TPR_17   1 lylkaleldPnnadaynnLAelllknGdlmtAr 33 
                 +y++a+ +d  n+ +++  ++l+++++++++A+
  EPX71174.1 647 AYQQAVYRDGRNPTFWCSIGVLYYQINQYQDAL 679
                 59*****************************96 PP

  == domain 9  score: 16.3 bits;  conditional E-value: 8.9e-06
      TPR_17   2 ylkaleldPnnadaynnLAelllknG 27 
                 y +a++l+P  +++++ L++l+++ +
  EPX71174.1 682 YSRAIRLNPYISEVWYDLGTLYESCH 707
                 99********************8654 PP

  == domain 10  score: 3.7 bits;  conditional E-value: 0.091
      TPR_17   1 lylkaleldPnnad 14 
                 +y++a+eldP n+ 
  EPX71174.1 716 AYQRAAELDPANPH 729
                 5*********9986 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.6   1.4e-05     0.015       2      38 ..     376     412 ..     375     417 .. 0.90
   2 !   11.9   0.0    0.0003      0.32       5      42 ..     413     450 ..     409     452 .. 0.90
   3 ?    6.5   0.1     0.017        18       2      38 ..     444     482 ..     443     483 .. 0.86
   4 !   11.7   0.0   0.00035      0.37       1      42 [.     479     520 ..     479     525 .. 0.88
   5 ?    1.3   0.0      0.76   8.1e+02       3      25 ..     518     540 ..     516     552 .. 0.90
   6 !   17.8   0.1   3.8e-06     0.004       3      42 ..     555     594 ..     553     596 .. 0.92
   7 ?    1.7   0.0      0.59   6.2e+02      18      43 ..     608     633 ..     606     634 .. 0.88
   8 ?    5.8   0.1     0.027        29       3      38 ..     627     662 ..     625     668 .. 0.85
   9 !   13.3   0.0   0.00011      0.11       9      43 ..     667     701 ..     659     702 .. 0.89
  10 !   16.6   0.3   9.6e-06      0.01       2      41 ..     694     734 ..     693     738 .. 0.83

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.4e-05
      TPR_14   2 eallalaeallalGdpdeAiallrralalaPddaeaw 38 
                 ea+l+++++ +  +d d+A++++++al+++P +  a 
  EPX71174.1 376 EAWLQIGHLAELYDDSDKALTAYEAALRQNPYSIPAM 412
                 89*****************************886655 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 0.0003
      TPR_14   5 lalaeallalGdpdeAiallrralalaPddaeawllla 42 
                 l+ a +l++++++  Ai++++ +l+l+P++ e+w +l+
  EPX71174.1 413 LQVATLLRNREQFLLAIEYYQTILDLDPKQGEIWSALG 450
                 778999999*************************9887 PP

  == domain 3  score: 6.5 bits;  conditional E-value: 0.017
      TPR_14   2 eallalaeallalGdpdeAiallrra..lalaPddaeaw 38 
                 e + al++ +l ++d+ +A  ++r+a    ++P+++ +w
  EPX71174.1 444 EIWSALGHCYLMRDDLSRAYSAYRQAlyHLKDPKNPKLW 482
                 5799*********************94444688888888 PP

  == domain 4  score: 11.7 bits;  conditional E-value: 0.00035
      TPR_14   1 peallalaeallalGdpdeAiallrralalaPddaeawllla 42 
                 p++++ ++ ++ + G ++ A++++ ++l+ +P+++ ++  + 
  EPX71174.1 479 PKLWYGIGILYDRYGSHEHAEEAFTQCLRMDPNFEKVNEIYF 520
                 689*****************************9987765554 PP

  == domain 5  score: 1.3 bits;  conditional E-value: 0.76
      TPR_14   3 allalaeallalGdpdeAiallr 25 
                  + +l+ ++ ++ +++++++l+r
  EPX71174.1 518 IYFRLGIIYKQQHKFAQSLELFR 540
                 6889****************998 PP

  == domain 6  score: 17.8 bits;  conditional E-value: 3.8e-06
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddaeawllla 42 
                  + +++++++++ +++ A ++++r+la  P++a ++ +l+
  EPX71174.1 555 IYFQIGHVYEQQKEYKLAKEAYERVLAETPNHAKVLQQLG 594
                 57899******************************99997 PP

  == domain 7  score: 1.7 bits;  conditional E-value: 0.59
      TPR_14  18 deAiallrralalaPddaeawlllaq 43 
                 d Ai++l + l+++ +da+ w+l ++
  EPX71174.1 608 DLAIQYLTKSLEADDTDAQSWYLIGR 633
                 77****************99998877 PP

  == domain 8  score: 5.8 bits;  conditional E-value: 0.027
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddaeaw 38 
                  ++++++ + a++++ +A +++++a+ ++  ++++w
  EPX71174.1 627 SWYLIGRCYVAQQKYNKAYEAYQQAVYRDGRNPTFW 662
                 79**********************986666666666 PP

  == domain 9  score: 13.3 bits;  conditional E-value: 0.00011
      TPR_14   9 eallalGdpdeAiallrralalaPddaeawlllaq 43 
                  ++++  ++++A++++ ra++l+P   e+w+ l+ 
  EPX71174.1 667 VLYYQINQYQDALDAYSRAIRLNPYISEVWYDLGT 701
                 5788889***********************99986 PP

  == domain 10  score: 16.6 bits;  conditional E-value: 9.6e-06
      TPR_14   2 eallalaeallalG.dpdeAiallrralalaPddaeawlll 41 
                 e++++l+ +++    +  +A+++++ra +l+P+++ ++ +l
  EPX71174.1 694 EVWYDLGTLYESCHnQISDALDAYQRAAELDPANPHIRARL 734
                 78********9985379*****************9655444 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.2     0.026        28      12      28 ..     390     406 ..     389     408 .. 0.87
   2 !   19.5   0.3   1.1e-06    0.0012       3      61 ..     415     470 ..     413     479 .. 0.92
   3 ?    4.4   0.0     0.059        62      29      65 ..     474     510 ..     471     513 .. 0.90
   4 !    8.4   0.0    0.0032       3.4      12      61 ..     494     543 ..     483     549 .. 0.85
   5 !   17.0   0.1   6.5e-06    0.0068       3      66 ..     559     623 ..     557     625 .. 0.87
   6 !   10.2   0.7   0.00086      0.91      16      61 ..     610     652 ..     606     660 .. 0.80
   7 !   24.5   1.5   3.1e-08   3.2e-05       4      68 .]     666     728 ..     663     728 .. 0.94
   8 !    7.8   0.5     0.005       5.3      11      42 ..     708     740 ..     697     752 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.026
      TPR_16  12 dyddAaaaleaalkrdp 28 
                 d d+A+ a+eaal+++p
  EPX71174.1 390 DSDKALTAYEAALRQNP 406
                 6799***********95 PP

  == domain 2  score: 19.5 bits;  conditional E-value: 1.1e-06
      TPR_16   3 laraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraal 61 
                  a++++++ ++  A++++++ l++d   P   e + +lg ++l + +l +A  +yr al
  EPX71174.1 415 VATLLRNREQFLLAIEYYQTILDLD---PKQGEIWSALGHCYLMRDDLSRAYSAYRQAL 470
                 689999*******************...************************9999998 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.059
      TPR_16  29 ssPdaaeAllllgdaalrqgrlaeAaalyraalraap 65 
                 ++P ++  +++ g ++ r g ++ A++++   lr +p
  EPX71174.1 474 KDPKNPKLWYGIGILYDRYGSHEHAEEAFTQCLRMDP 510
                 5699999*******************99999888888 PP

  == domain 4  score: 8.4 bits;  conditional E-value: 0.0032
      TPR_16  12 dyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraal 61 
                   + A++a+++ l++dp      e ++ lg ++ +q  +a  ++l+r  l
  EPX71174.1 494 SHEHAEEAFTQCLRMDPNFEKVNEIYFRLGIIYKQQHKFAQSLELFRYIL 543
                 56679***********99999***********************999877 PP

  == domain 5  score: 17.0 bits;  conditional E-value: 6.5e-06
      TPR_16   3 laraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrq....grlaeAaalyraalraapd 66 
                  ++ + ++++y  A +a+e++l+     P +a  l  lg+++ +q     + ++A++++ + l+a+  
  EPX71174.1 559 IGHVYEQQKEYKLAKEAYERVLAET---PNHAKVLQQLGWLCHQQsssfTNQDLAIQYLTKSLEADDT 623
                 699**********************...****************977777788888888887777665 PP

  == domain 6  score: 10.2 bits;  conditional E-value: 0.00086
      TPR_16  16 AaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraal 61 
                 A+ +l+  l++d     +a++++l g+++ +q+ + +A ++y+ a+
  EPX71174.1 610 AIQYLTKSLEAD---DTDAQSWYLIGRCYVAQQKYNKAYEAYQQAV 652
                 667777777777...66999******************98888877 PP

  == domain 7  score: 24.5 bits;  conditional E-value: 3.1e-08
      TPR_16   4 araalragdyddAaaaleaalkrdpssPdaaeAllllgdaal.rqgrlaeAaalyraalraapdap 68 
                 + ++++ ++y+dA+ a+ +a++++   P   e ++ lg ++   ++   +A+++y++a++ +p +p
  EPX71174.1 666 GVLYYQINQYQDALDAYSRAIRLN---PYISEVWYDLGTLYEsCHNQISDALDAYQRAAELDPANP 728
                 6689********************...99999**********777******************997 PP

  == domain 8  score: 7.8 bits;  conditional E-value: 0.005
      TPR_16  11 gdyddAaaaleaalkrdpssPd.aaeAllllgd 42 
                 ++  dA+ a+++a ++dp  P  +a+ +ll+g 
  EPX71174.1 708 NQISDALDAYQRAAELDPANPHiRARLQLLRGS 740
                 56789************7666688888887775 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.2     0.015        16      11      25 ..     392     406 ..     390     409 .. 0.92
   2 !   10.5   0.0   0.00034      0.36       9      39 ..     424     454 ..     418     457 .. 0.87
   3 !    5.9   0.8    0.0097        10      16      38 ..     465     489 ..     453     493 .. 0.77
   4 ?    2.2   0.0      0.14   1.4e+02      29      41 ..     517     529 ..     492     529 .. 0.81
   5 !    7.8   0.2    0.0025       2.6       1      40 [.     560     599 ..     554     601 .. 0.89
   6 ?    0.1   0.0      0.61   6.4e+02      12      40 ..     609     637 ..     607     638 .. 0.86
   7 !   26.1   1.2   4.6e-09   4.8e-06       1      40 [.     632     671 ..     632     673 .. 0.95
   8 !   23.8   2.1   2.4e-08   2.6e-05       4      39 ..     669     704 ..     668     705 .. 0.95
   9 !   16.7   0.2   4.1e-06    0.0044       8      31 ..     708     731 ..     707     734 .. 0.90

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.015
      TPR_11  11 eeAieaYkkAlkldP 25 
                 ++A++aY++Al+ +P
  EPX71174.1 392 DKALTAYEAALRQNP 406
                 79***********99 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00034
      TPR_11   9 kyeeAieaYkkAlkldPdnaeayynLGlayy 39 
                 ++  Aie Y++ l+ldP++ e++++LG+ y+
  EPX71174.1 424 QFLLAIEYYQTILDLDPKQGEIWSALGHCYL 454
                 55569**********************9886 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.0097
      TPR_11  16 aYkkAlk..ldPdnaeayynLGlay 38 
                 aY++Al    dP+n+ ++y++G +y
  EPX71174.1 465 AYRQALYhlKDPKNPKLWYGIGILY 489
                 56666643369***********999 PP

  == domain 4  score: 2.2 bits;  conditional E-value: 0.14
      TPR_11  29 eayynLGlayykq 41 
                 e+y+ LG +y +q
  EPX71174.1 517 EIYFRLGIIYKQQ 529
                 89********987 PP

  == domain 5  score: 7.8 bits;  conditional E-value: 0.0025
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldPdnaeayynLGlayyk 40 
                 G++y +q +y+ A eaY++ l+ +P+ a ++  LG + ++
  EPX71174.1 560 GHVYEQQKEYKLAKEAYERVLAETPNHAKVLQQLGWLCHQ 599
                 89999*********************99999999866665 PP

  == domain 6  score: 0.1 bits;  conditional E-value: 0.61
      TPR_11  12 eAieaYkkAlkldPdnaeayynLGlayyk 40 
                  Ai+ + k l+ d ++a  +y +G  y +
  EPX71174.1 609 LAIQYLTKSLEADDTDAQSWYLIGRCYVA 637
                 5899999999**************87765 PP

  == domain 7  score: 26.1 bits;  conditional E-value: 4.6e-09
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldPdnaeayynLGlayyk 40 
                 G+ y++q+ky++A eaY++A+  d  n+++++ +G++yy+
  EPX71174.1 632 GRCYVAQQKYNKAYEAYQQAVYRDGRNPTFWCSIGVLYYQ 671
                 677************************************8 PP

  == domain 8  score: 23.8 bits;  conditional E-value: 2.4e-08
      TPR_11   4 yyeqGkyeeAieaYkkAlkldPdnaeayynLGlayy 39 
                 yy+ ++y +A+ aY++A++l+P   e++y LG +y 
  EPX71174.1 669 YYQINQYQDALDAYSRAIRLNPYISEVWYDLGTLYE 704
                 9*******************************9885 PP

  == domain 9  score: 16.7 bits;  conditional E-value: 4.1e-06
      TPR_11   8 GkyeeAieaYkkAlkldPdnaeay 31 
                 +++ +A+ aY++A +ldP n+ + 
  EPX71174.1 708 NQISDALDAYQRAAELDPANPHIR 731
                 6899*****************875 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.4   6.6e-05      0.07       6      66 ..     390     450 ..     387     452 .. 0.93
   2 !   14.6   0.0   3.3e-05     0.035       6      44 ..     424     462 ..     419     462 .. 0.89
   3 !   16.3   0.0     1e-05     0.011       2      58 ..     454     512 ..     453     522 .. 0.90
   4 !    7.4   0.0     0.006       6.3       5      57 ..     493     548 ..     491     554 .. 0.89
   5 !   10.2   0.1   0.00082      0.86       4      61 ..     529     589 ..     526     596 .. 0.81
   6 !   18.9   0.2   1.5e-06    0.0016      10      57 ..     610     657 ..     606     662 .. 0.90
   7 !   19.9   1.3   7.5e-07   0.00079       6      62 ..     674     731 ..     670     737 .. 0.94

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 6.6e-05
      TPR_19   6 dyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpddaryasLlA 66 
                 d + Al ++e+al ++p +  a l+ A +l +  q+  A++  +++++ dp++ +++s+l+
  EPX71174.1 390 DSDKALTAYEAALRQNPYSIPAMLQVATLLRNREQFLLAIEYYQTILDLDPKQGEIWSALG 450
                 7899************************************************988888875 PP

  == domain 2  score: 14.6 bits;  conditional E-value: 3.3e-05
      TPR_19   6 dyaeAlalleqalqedpknaearllLAeallalgqldeA 44 
                 ++  A+++++ +l+ dpk++e++ +L  ++l   +l  A
  EPX71174.1 424 QFLLAIEYYQTILDLDPKQGEIWSALGHCYLMRDDLSRA 462
                 66679**************************99888776 PP

  == domain 3  score: 16.3 bits;  conditional E-value: 1e-05
      TPR_19   2 laegdyaeAlalleqal..qedpknaearllLAeallalgqldeAealLdalpeedpdd 58 
                 l++ d+ +A ++++qal   +dpkn+ ++++  +++   g  + Ae++  + +++dp+ 
  EPX71174.1 454 LMRDDLSRAYSAYRQALyhLKDPKNPKLWYGIGILYDRYGSHEHAEEAFTQCLRMDPNF 512
                 67899***********86666*******************************9999995 PP

  == domain 4  score: 7.4 bits;  conditional E-value: 0.006
      TPR_19   5 gdyaeAlalleqalqedpk...naearllLAeallalgqldeAealLdalpeedpd 57 
                 g ++ A ++++q l  dp+     e+  +L +++ ++  +++  +l   ++++ p+
  EPX71174.1 493 GSHEHAEEAFTQCLRMDPNfekVNEIYFRLGIIYKQQHKFAQSLELFRYILNHPPK 548
                 78999**************777778888****************999988887776 PP

  == domain 5  score: 10.2 bits;  conditional E-value: 0.00082
      TPR_19   4 egdyaeAlalleqalqedpk...naearllLAeallalgqldeAealLdalpeedpddary 61 
                 + ++a+ l+l++++l + pk    +++  +   ++ ++++++ A+++ +++++e+p++a +
  EPX71174.1 529 QHKFAQSLELFRYILNHPPKpltVLDIYFQIGHVYEQQKEYKLAKEAYERVLAETPNHAKV 589
                 66777778888888888777777778888889999********************997544 PP

  == domain 6  score: 18.9 bits;  conditional E-value: 1.5e-06
      TPR_19  10 AlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpd 57 
                 A+++l++ l++d  +a  ++l  ++++a+  +++A ++ +++   d  
  EPX71174.1 610 AIQYLTKSLEADDTDAQSWYLIGRCYVAQQKYNKAYEAYQQAVYRDGR 657
                 9***********************************999998776665 PP

  == domain 7  score: 19.9 bits;  conditional E-value: 7.5e-07
      TPR_19   6 dyaeAlalleqalqedpknaearllLAeallal.gqldeAealLdalpeedpddarya 62 
                 +y++Al+++++a+  +p  +e++++L  ++ +  +q+ +A ++ +++ e dp ++ ++
  EPX71174.1 674 QYQDALDAYSRAIRLNPYISEVWYDLGTLYESChNQISDALDAYQRAAELDPANPHIR 731
                 9***************************************************998877 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.4       0.2   2.1e+02      50      73 ..     380     403 ..     375     406 .. 0.75
   2 !   12.8   2.7    0.0001      0.11       4      72 ..     411     470 ..     408     475 .. 0.92
   3 !   19.5   0.8   8.2e-07   0.00087       5      76 ..     445     510 ..     441     511 .. 0.90
   4 ?    5.0   0.0     0.029        30      47      69 ..     518     540 ..     515     546 .. 0.79
   5 !   18.9   0.5   1.3e-06    0.0014       3      74 ..     553     620 ..     551     623 .. 0.85
   6 !   11.1   1.6   0.00035      0.37      22      71 ..     610     651 ..     608     655 .. 0.73
   7 !   21.6   2.4   1.9e-07    0.0002       4      74 ..     626     688 ..     623     690 .. 0.79
   8 !    8.5   0.2    0.0023       2.4      42      75 ..     690     724 ..     688     726 .. 0.88

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.2
      TPR_12  50 nLgrlyralgryeeAlelleeala 73 
                  +g l ++ ++ ++Al ++e al+
  EPX71174.1 380 QIGHLAELYDDSDKALTAYEAALR 403
                 567777777888888888888886 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 0.0001
      TPR_12   4 talnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleeal 72 
                 ++l ++a++lr ++++  A+e++++ l++      p+     ++  +Lg +y++++++  A +++++al
  EPX71174.1 411 AML-QVATLLRNREQFLLAIEYYQTILDLD-----PK---QGEIWSALGHCYLMRDDLSRAYSAYRQAL 470
                 566.99************************.....86...6999************************8 PP

  == domain 3  score: 19.5 bits;  conditional E-value: 8.2e-07
      TPR_12   5 alnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealaiae 76 
                 +++ l+++++ + ++  A + +++al       +p++p      +++g+ly++ g +e A+e+++++l++++
  EPX71174.1 445 IWSALGHCYLMRDDLSRAYSAYRQALYHL---KDPKNPK---LWYGIGILYDRYGSHEHAEEAFTQCLRMDP 510
                 78899********************9999...5688877...6**************************976 PP

  == domain 4  score: 5.0 bits;  conditional E-value: 0.029
      TPR_12  47 tlrnLgrlyralgryeeAlelle 69 
                 +++ Lg++y ++ ++++ lel++
  EPX71174.1 518 IYFRLGIIYKQQHKFAQSLELFR 540
                 57788888888888888888875 PP

  == domain 5  score: 18.9 bits;  conditional E-value: 1.3e-06
      TPR_12   3 atalnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralg....ryeeAlelleealai 74 
                 + ++ ++++v+ ++++y  A e +e++l+       p+h   a +l+ Lg+l++++     +++ A+++l+++l++
  EPX71174.1 553 LDIYFQIGHVYEQQKEYKLAKEAYERVLAET-----PNH---AKVLQQLGWLCHQQSssftNQDLAIQYLTKSLEA 620
                 5678799********************7666.....887...99********988765556889999999999997 PP

  == domain 6  score: 11.1 bits;  conditional E-value: 0.00035
      TPR_12  22 AlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleea 71 
                 A+++l k+le+       d    a++ + +gr+y a+ +y +A e++++a
  EPX71174.1 610 AIQYLTKSLEAD------DT--DAQSWYLIGRCYVAQQKYNKAYEAYQQA 651
                 555555555554......33..6899999999999999999999999998 PP

  == domain 7  score: 21.6 bits;  conditional E-value: 1.9e-07
      TPR_12   4 talnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealai 74 
                 ++++ ++ ++ ++++y +A e +++a+ +      + +    t  + +g ly++ ++y++Al+++ +a+++
  EPX71174.1 626 QSWYLIGRCYVAQQKYNKAYEAYQQAVYRD-----G-R--NPTFWCSIGVLYYQINQYQDALDAYSRAIRL 688
                 566677888888888888888888884333.....3.3..46799***********************987 PP

  == domain 8  score: 8.5 bits;  conditional E-value: 0.0023
      TPR_12  42 pltattlrnLgrly.ralgryeeAlelleealaia 75 
                 p+ +++ ++Lg+ly +  ++  +Al+++++a +++
  EPX71174.1 690 PYISEVWYDLGTLYeSCHNQISDALDAYQRAAELD 724
                 66788899******66***************9986 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.1    0.0019         2       1      31 [.     376     406 ..     376     406 .. 0.92
   2 ?    6.5   0.1     0.014        15       2      32 ..     411     441 ..     410     441 .. 0.91
   3 ?    2.5   0.2      0.27   2.9e+02       6      27 ..     449     470 ..     448     471 .. 0.90
   4 ?    0.1   0.0       1.6   1.7e+03       4      32 ..     483     511 ..     481     511 .. 0.87
   5 ?    1.9   0.0      0.41   4.3e+02       3      24 ..     519     540 ..     517     545 .. 0.84
   6 !   15.0   0.1   2.8e-05      0.03       3      32 ..     556     585 ..     554     586 .. 0.91
   7 ?   -1.9   0.0       6.5   6.8e+03       5      25 ..     592     616 ..     589     619 .. 0.80
   8 !   15.9   1.0   1.4e-05     0.015       2      28 ..     627     653 ..     626     656 .. 0.90
   9 !    9.9   0.1    0.0011       1.2       6      31 ..     665     690 ..     664     690 .. 0.92
  10 !    9.0   0.0    0.0022       2.3       1      31 [.     694     725 ..     694     727 .. 0.91

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.0019
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-T CS
       TPR_6   1 dAlyklalsyrklgdtdkAlealerlikeYP 31 
                 +A ++++ + +  +d+dkAl+a+e  +++ P
  EPX71174.1 376 EAWLQIGHLAELYDDSDKALTAYEAALRQNP 406
                 699999*9999978*************9988 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.014
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6   2 AlyklalsyrklgdtdkAlealerlikeYPd 32 
                 A+++ a ++r+  +   A+e+++ +++  P+
  EPX71174.1 411 AMLQVATLLRNREQFLLAIEYYQTILDLDPK 441
                 99********966*************98885 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.27
                 HHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   6 lalsyrklgdtdkAlealerli 27 
                 l+ +y++ +d ++A  a+++ +
  EPX71174.1 449 LGHCYLMRDDLSRAYSAYRQAL 470
                 789****99**********975 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 1.6
                 HHHHHHHHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6   4 yklalsyrklgdtdkAlealerlikeYPd 32 
                 y ++ +y + g ++ A ea+ ++++  P+
  EPX71174.1 483 YGIGILYDRYGSHEHAEEAFTQCLRMDPN 511
                 999******779999******99987775 PP

  == domain 5  score: 1.9 bits;  conditional E-value: 0.41
                 HHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   3 lyklalsyrklgdtdkAleale 24 
                 +++l+  y+++ + +++le+++
  EPX71174.1 519 YFRLGIIYKQQHKFAQSLELFR 540
                 89*******955999**99998 PP

  == domain 6  score: 15.0 bits;  conditional E-value: 2.8e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6   3 lyklalsyrklgdtdkAlealerlikeYPd 32 
                 +++++  y++++++  A+ea+er++ e P+
  EPX71174.1 556 YFQIGHVYEQQKEYKLAKEAYERVLAETPN 585
                 89***********************98777 PP

  == domain 7  score: -1.9 bits;  conditional E-value: 6.5
                 HHHHHHHHH....HHHHHHHHHHHH CS
       TPR_6   5 klalsyrkl....gdtdkAlealer 25 
                 +l+++  ++    ++ d A+++l +
  EPX71174.1 592 QLGWLCHQQsssfTNQDLAIQYLTK 616
                 678777777788899999**99976 PP

  == domain 8  score: 15.9 bits;  conditional E-value: 1.4e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   2 AlyklalsyrklgdtdkAlealerlik 28 
                 + y+++++y +++++ kA ea+++ + 
  EPX71174.1 627 SWYLIGRCYVAQQKYNKAYEAYQQAVY 653
                 68*********88***********875 PP

  == domain 9  score: 9.9 bits;  conditional E-value: 0.0011
                 HHHHHHHHHHHHHHHHHHHHHHHH-T CS
       TPR_6   6 lalsyrklgdtdkAlealerlikeYP 31 
                 ++ +y++ +++++Al+a+ r i+  P
  EPX71174.1 665 IGVLYYQINQYQDALDAYSRAIRLNP 690
                 799****88*************9877 PP

  == domain 10  score: 9.0 bits;  conditional E-value: 0.0022
                 HHHHHHHHHHHH.HHHHHHHHHHHHHHHHH-T CS
       TPR_6   1 dAlyklalsyrk.lgdtdkAlealerlikeYP 31 
                 ++ y l+ +y++  ++ ++Al+a++r  +  P
  EPX71174.1 694 EVWYDLGTLYEScHNQISDALDAYQRAAELDP 725
                 57899*********************998777 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.4     2e-05     0.021       5      62 ..     385     442 ..     381     447 .. 0.92
   2 !   13.7   0.1     5e-05     0.052       3      63 ..     451     513 ..     449     523 .. 0.91
   3 ?    4.2   0.0     0.046        48      31      63 ..     555     587 ..     522     593 .. 0.66
   4 !   18.3   0.1   1.8e-06    0.0019       3      60 ..     633     690 ..     631     695 .. 0.95
   5 !   15.6   3.0   1.3e-05     0.013       5      72 ..     669     737 ..     667     738 .. 0.89

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 2e-05
       TPR_9   5 aireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapda 62 
                 a   +d+++al ++e  l  +P ++   +  + ll  ++++  A++  ++ l+l+p+ 
  EPX71174.1 385 AELYDDSDKALTAYEAALRQNPYSIPAMLQVATLLRNREQFLLAIEYYQTILDLDPKQ 442
                 56679***************************************************75 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 5e-05
       TPR_9   3 aiaireedweralavverllll..aPddpeerrdRGlllaqlGclsaAladLeaylalapdap 63 
                 ++++ ++d +ra  ++   l+   +P+ p +++  G+l+ + G  + A +++ ++l+++p+ +
  EPX71174.1 451 HCYLMRDDLSRAYSAYRQALYHlkDPKNPKLWYGIGILYDRYGSHEHAEEAFTQCLRMDPNFE 513
                 78999************9999889***********************************9755 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.046
       TPR_9  31 errdRGlllaqlGclsaAladLeaylalapdap 63 
                  ++  G +++q+  ++ A ++ e+ la +p+ +
  EPX71174.1 555 IYFQIGHVYEQQKEYKLAKEAYERVLAETPNHA 587
                 466778889999999999999999998888654 PP

  == domain 4  score: 18.3 bits;  conditional E-value: 1.8e-06
       TPR_9   3 aiaireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalap 60 
                 +++  ++++ +a ++++  ++ + + p  +   G+l++q ++++ Al++  ++++l+p
  EPX71174.1 633 RCYVAQQKYNKAYEAYQQAVYRDGRNPTFWCSIGVLYYQINQYQDALDAYSRAIRLNP 690
                 67999*************************************************9998 PP

  == domain 5  score: 15.6 bits;  conditional E-value: 1.3e-05
       TPR_9   5 aireedweralavverllllaPddpeerrdRGlllaql.GclsaAladLeaylalapdapdaeairaqL 72 
                 + + ++++ al ++ r + l+P   e ++d G l++   +++s Al++ +++++l+p++p ++a  ++L
  EPX71174.1 669 YYQINQYQDALDAYSRAIRLNPYISEVWYDLGTLYESChNQISDALDAYQRAAELDPANPHIRARLQLL 737
                 667799******************************96489****************999887755555 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.1     0.026        27      13      34 ..     389     408 ..     377     410 .. 0.75
   2 ?    1.4   0.1      0.39   4.2e+02      10      32 ..     420     442 ..     411     445 .. 0.70
   3 ?    4.1   0.3     0.053        56       2      33 ..     446     477 ..     445     480 .. 0.83
   4 ?    3.1   0.0      0.11   1.2e+02       3      31 ..     483     511 ..     481     516 .. 0.78
   5 ?    2.5   0.1      0.18   1.9e+02       2      23 ..     519     540 ..     518     545 .. 0.91
   6 !   12.6   0.1    0.0001      0.11       2      35 ..     556     587 ..     555     588 .. 0.92
   7 ?    2.3   0.1       0.2   2.1e+02       4      30 ..     592     622 ..     589     626 .. 0.68
   8 !   13.3   0.2   6.3e-05     0.067       1      33 [.     627     657 ..     627     660 .. 0.88
   9 !   10.7   0.1   0.00041      0.43       2      34 ..     662     692 ..     662     694 .. 0.91
  10 ?    1.5   0.0      0.35   3.7e+02       3      33 ..     697     726 ..     695     731 .. 0.74

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.026
       TPR_7  13 GdyeeAielyeqsLaltkdped 34 
                  d ++A++ ye+  al+  p+ 
  EPX71174.1 389 DDSDKALTAYEA--ALRQNPYS 408
                 579*********..99988875 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.39
       TPR_7  10 srlGdyeeAielyeqsLaltkdp 32 
                 +++ ++  Aie+y+  L l+  +
  EPX71174.1 420 RNREQFLLAIEYYQTILDLDPKQ 442
                 555555569******88887665 PP

  == domain 3  score: 4.1 bits;  conditional E-value: 0.053
       TPR_7   2 LlnLarlysrlGdyeeAielyeqsLaltkdpe 33 
                 +++L+++y  + d ++A + y+q+L   kdp 
  EPX71174.1 446 WSALGHCYLMRDDLSRAYSAYRQALYHLKDPK 477
                 679********************885556655 PP

  == domain 4  score: 3.1 bits;  conditional E-value: 0.11
       TPR_7   3 lnLarlysrlGdyeeAielyeqsLaltkd 31 
                 + ++ ly r G +e A+e ++q+L+++  
  EPX71174.1 483 YGIGILYDRYGSHEHAEEAFTQCLRMDPN 511
                 5678899999999*********6666544 PP

  == domain 5  score: 2.5 bits;  conditional E-value: 0.18
       TPR_7   2 LlnLarlysrlGdyeeAielye 23 
                 +++L+ +y ++ ++++ +el++
  EPX71174.1 519 YFRLGIIYKQQHKFAQSLELFR 540
                 789*****************97 PP

  == domain 6  score: 12.6 bits;  conditional E-value: 0.0001
       TPR_7   2 LlnLarlysrlGdyeeAielyeqsLaltkdpeda 35 
                 +++++++y+++ +y+ A e ye+  +l++ p++a
  EPX71174.1 556 YFQIGHVYEQQKEYKLAKEAYER--VLAETPNHA 587
                 7899*******************..999999886 PP

  == domain 7  score: 2.3 bits;  conditional E-value: 0.2
       TPR_7   4 nLarlysr....lGdyeeAielyeqsLaltk 30 
                 +L+ l+++      + + Ai+++++sL+ ++
  EPX71174.1 592 QLGWLCHQqsssFTNQDLAIQYLTKSLEADD 622
                 566665554555667889*******776655 PP

  == domain 8  score: 13.3 bits;  conditional E-value: 6.3e-05
       TPR_7   1 aLlnLarlysrlGdyeeAielyeqsLaltkdpe 33 
                 +++ ++r+y+++++y +A e y+q  a+ +d  
  EPX71174.1 627 SWYLIGRCYVAQQKYNKAYEAYQQ--AVYRDGR 657
                 6789********************..9888765 PP

  == domain 9  score: 10.7 bits;  conditional E-value: 0.00041
       TPR_7   2 LlnLarlysrlGdyeeAielyeqsLaltkdped 34 
                 ++ +++ly + ++y++A++ y +  a++  p++
  EPX71174.1 662 WCSIGVLYYQINQYQDALDAYSR--AIRLNPYI 692
                 5899*******************..99999987 PP

  == domain 10  score: 1.5 bits;  conditional E-value: 0.35
       TPR_7   3 lnLarlysr.lGdyeeAielyeqsLaltkdpe 33 
                 + L+ ly++  ++ ++A++ y++  a + dp 
  EPX71174.1 697 YDLGTLYEScHNQISDALDAYQR--AAELDPA 726
                 5678888887788899*******..5555554 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   2.8     0.014        15       6      72 ..     392     459 ..     388     474 .. 0.81
   2 ?    3.0   0.2      0.12   1.2e+02      29      50 ..     449     470 ..     444     504 .. 0.79
   3 ?    2.7   0.3      0.14   1.4e+02      25      66 ..     554     597 ..     528     605 .. 0.75
   4 !   29.9   2.8   4.6e-10   4.8e-07       7      81 ..     609     684 ..     604     685 .. 0.93

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.014
                 HHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-H CS
      ANAPC3   6 knAiflaerllaaetespedayllAlclylngqykrAyellrka.klnskslgcrylfAqcllkLkky 72 
                 ++A+  +e +l ++++s  + +  A  l +++q+  A+e++++  +l++k  +++  +++c+l  + +
  EPX71174.1 392 DKALTAYEAALRQNPYSIPAMLQVATLLRNREQFLLAIEYYQTIlDLDPKQGEIWSALGHCYLMRDDL 459
                 689999999997777777777778********************999999999999999999855444 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.12
                 HHHHHHHTT-HHHHHHHHHCTS CS
      ANAPC3  29 lAlclylngqykrAyellrkak 50 
                 l+ c++ + +  rAy  +r+a 
  EPX71174.1 449 LGHCYLMRDDLSRAYSAYRQAL 470
                 799*************999983 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.14
                 HHHHH.HHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHH CS
      ANAPC3  25 dayll.AlclylngqykrAyellrka.klnskslgcrylfAqcl 66 
                 d+y+  + ++ ++++yk A e +++   + +++ +++  ++  +
  EPX71174.1 554 DIYFQiGHVYEQQKEYKLAKEAYERVlAETPNHAKVLQQLGWLC 597
                 56664599999999999999999999888888887776665555 PP

  == domain 4  score: 29.9 bits;  conditional E-value: 4.6e-10
                 HHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH-S CS
      ANAPC3   7 nAiflaerllaaetespedayllAlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaLek 81 
                  Ai ++ + l+a+  ++++ yl + c+  +++y++Aye +++a   +++++  +  ++  ++++++y++A++a+++
  EPX71174.1 609 LAIQYLTKSLEADDTDAQSWYLIGRCYVAQQKYNKAYEAYQQAvYRDGRNPTFWCSIGVLYYQINQYQDALDAYSR 684
                 588899999999999999******************************************************9875 PP

>> TPR_15  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.7   1.2    0.0068       7.1      49     174 ..     380     471 ..     365     545 .. 0.48
   2 ?    4.6   0.2     0.015        16     151     189 ..     558     596 ..     525     603 .. 0.86
   3 !    7.8   0.3    0.0015       1.6     139     178 ..     618     657 ..     599     660 .. 0.80
   4 !    5.2   0.0      0.01        10     144     180 ..     657     693 ..     656     699 .. 0.90
   5 !    5.9   0.0     0.006       6.3     155     186 ..     703     734 ..     693     737 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0068
      TPR_15  49 tladLAwalqqedearkAyrqLlasgkaraedyerliellydaepkeaarlaekgwrrfrsprlLssalellerakdydriaellksleeeeaae.qsa 146
                 + + LA    + d+a +Ay+  l+ +                                        ++l++++ +++ ++    +++ +   ++  ++ 
  EPX71174.1 380 QIGHLAELYDDSDKALTAYEAALRQNPY-----------------------------------SIPAMLQVATLLRNREQFLLAIEYYQTILDLDpKQG 443
                 4444444444444444444444333333...................................333333333333333333333333222222222333 PP

      TPR_15 147 afllaraelyrqegqtdaAlrdyreAla 174
                  +++a++  y+ +++  +A  +yr+Al 
  EPX71174.1 444 EIWSALGHCYLMRDDLSRAYSAYRQALY 471
                 3444444444444444444444444432 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.015
      TPR_15 151 araelyrqegqtdaAlrdyreAlalapdsselraallWl 189
                   + +y+q+ + + A ++y+++la  p+ +++ ++l Wl
  EPX71174.1 558 QIGHVYEQQKEYKLAKEAYERVLAETPNHAKVLQQLGWL 596
                 56789*****************************99997 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.0015
      TPR_15 139 eeaaeqsaafllaraelyrqegqtdaAlrdyreAlalapd 178
                 +ea   +a+ +++ ++ y ++ + ++A ++y++A+ +++ 
  EPX71174.1 618 LEADDTDAQSWYLIGRCYVAQQKYNKAYEAYQQAVYRDGR 657
                 3344589****************************99876 PP

  == domain 4  score: 5.2 bits;  conditional E-value: 0.01
      TPR_15 144 qsaafllaraelyrqegqtdaAlrdyreAlalapdss 180
                 ++++f+   + ly q +q ++Al +y +A++l+p  s
  EPX71174.1 657 RNPTFWCSIGVLYYQINQYQDALDAYSRAIRLNPYIS 693
                 5799****************************99755 PP

  == domain 5  score: 5.9 bits;  conditional E-value: 0.006
      TPR_15 155 lyrqegqtdaAlrdyreAlalapdsselraal 186
                 +++  +q  +Al +y++A +l+p++  +ra+l
  EPX71174.1 703 YESCHNQISDALDAYQRAAELDPANPHIRARL 734
                 455678999********************987 PP

>> TPR_20  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.5   0.2    0.0097        10       5      85 ..     392     470 ..     389     473 .. 0.74
   2 ?    0.1   0.0         1   1.1e+03      17      56 ..     474     513 ..     459     518 .. 0.86
   3 !    7.6   0.1    0.0044       4.6       5      49 ..     608     652 ..     605     660 .. 0.87
   4 ?    1.3   0.0      0.41   4.3e+02      11      44 ..     648     681 ..     645     690 .. 0.79

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0097
      TPR_20   5 apelaeleaalaanpddldarldlAlallaagryeeAleqLleilkrdrkweddaarkqllkifealgsqdplvakyRrkL 85 
                 ++ l++ eaal +np  + a+l++A++l  +++   A+e   +il  d k  ++++  +l     + ++   + ++yR+ L
  EPX71174.1 392 DKALTAYEAALRQNPYSIPAMLQVATLLRNREQFLLAIEYYQTILDLDPK--QGEIWSALGHCYLMRDDLSRAYSAYRQAL 470
                 5678999**************************99999988888865544..35555555555555555555555555555 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 1
      TPR_20  17 anpddldarldlAlallaagryeeAleqLleilkrdrkwe 56 
                 ++p++ ++ +    ++   g +e A e++ + l+ d ++e
  EPX71174.1 474 KDPKNPKLWYGIGILYDRYGSHEHAEEAFTQCLRMDPNFE 513
                 7899999999999999999999999999999999999986 PP

  == domain 3  score: 7.6 bits;  conditional E-value: 0.0044
      TPR_20   5 apelaeleaalaanpddldarldlAlallaagryeeAleqLleil 49 
                 +  ++ l + l+a+ +d +  +   + ++a+++y +A e+  + +
  EPX71174.1 608 DLAIQYLTKSLEADDTDAQSWYLIGRCYVAQQKYNKAYEAYQQAV 652
                 56789999*****************************99866655 PP

  == domain 4  score: 1.3 bits;  conditional E-value: 0.41
      TPR_20  11 leaalaanpddldarldlAlallaagryeeAleq 44 
                  ++a+  +  +    +    ++++ ++y++Al++
  EPX71174.1 648 YQQAVYRDGRNPTFWCSIGVLYYQINQYQDALDA 681
                 56777777777777788899************97 PP

>> ChAPs  ChAPs (Chs5p-Arf1p-binding proteins)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0   0.00096         1     192     288 ..     367     463 ..     361     468 .. 0.84
   2 ?    4.5   0.2     0.014        15     227     287 ..     580     644 ..     527     648 .. 0.79
   3 !    6.2   0.2     0.004       4.3     183     288 ..     567     679 ..     558     689 .. 0.63
   4 ?   -1.2   0.0      0.76     8e+02     248     288 ..     673     714 ..     669     716 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00096
                 HHHHHTT-GGGHHHHHHHHHHTT-HHHHHHHHHHHH-SSS-HHHHHHHHHHHHHHSS--HHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHHH CS
       ChAPs 192 lekLkeeepevvillarvllladeEvdavkllneeleeeekdaelLllqaefllskkkeelAlevakravksaPsefktWalLvkvYikledienAL 288
                 ++kL++ + e+   + ++  l d+  +a+   +++l++++ +   +l  a  l ++++  lA+e  +   ++ P + + W  L ++Y+  +d++ A 
  EPX71174.1 367 VRKLMSLNEEAWLQIGHLAELYDDSDKALTAYEAALRQNPYSIPAMLQVATLLRNREQFLLAIEYYQTILDLDPKQGEIWSALGHCYLMRDDLSRAY 463
                 56777777777777777777788888999999999*9**99977666667888888888*********************************99885 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.014
                 H-SSS-HHHHHHHHHHHHHHSS--.....HHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHH CS
       ChAPs 227 leeeekdaelLllqaefllskkke.....elAlevakravksaPsefktWalLvkvYikledienA 287
                 l+e+++ a++L+ q  +l +++++     +lA++  +++ ++   + + W+l+ ++Y++++ +++A
  EPX71174.1 580 LAETPNHAKVLQ-QLGWLCHQQSSsftnqDLAIQYLTKSLEADDTDAQSWYLIGRCYVAQQKYNKA 644
                 455555566554.44455444444466669******************************999988 PP

  == domain 3  score: 6.2 bits;  conditional E-value: 0.004
                 T-HHHHHHHHHHHHTT-GGGHHHHHHHHHHTT-HHH.......HHHHHHHHH-SSS-HHHHHHHHHHHHHHSS--HHHHHHHHHHHHH-TT-HHHHHHH CS
       ChAPs 183 krydralellekLkeeepevvillarvllladeEvd.......avkllneeleeeekdaelLllqaefllskkkeelAlevakravksaPsefktWalL 274
                 k+y+ a e  e++ +e+p+ + +l ++  l+ +  +       a++ l ++le + +da+   l     + ++k++ A e+ ++av     + + W  +
  EPX71174.1 567 KEYKLAKEAYERVLAETPNHAKVLQQLGWLCHQQSSsftnqdlAIQYLTKSLEADDTDAQSWYLIGRCYVAQQKYNKAYEAYQQAVYRDGRNPTFWCSI 665
                 555566666666666666666666665555444322122222367777777777777766666666666667777777777777777777777777777 PP

                 HHHHHHTT-HHHHH CS
       ChAPs 275 vkvYikledienAL 288
                    Y +++++++AL
  EPX71174.1 666 GVLYYQINQYQDAL 679
                 77777777777776 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 0.76
                 S--HHHHHHHHHHHHH-TT-HHHHHHHHHHHHHT.T-HHHHH CS
       ChAPs 248 kkeelAlevakravksaPsefktWalLvkvYikl.edienAL 288
                 ++++ Al++ +ra+++ P  ++ W+ L   Y +  ++i++AL
  EPX71174.1 673 NQYQDALDAYSRAIRLNPYISEVWYDLGTLYESChNQISDAL 714
                 56677999999********************76426777776 PP

>> BTAD  Bacterial transcriptional activator domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.6      0.17   1.8e+02      74     128 ..     421     475 ..     373     476 .. 0.81
   2 ?    4.2   0.1      0.05        53      77     122 ..     606     651 ..     584     655 .. 0.88
   3 ?    6.7   0.1    0.0087       9.2      74     123 ..     671     721 ..     664     724 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.17
                 HTT-HHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
        BTAD  74 rlGraeealaelealvaehPlrErlhrqlmrAlarsGrqaeALevYerlrrlLae 128
                   ++   a+++++ +++++P + + + +l  ++   ++ + A  +Y+++  +L++
  EPX71174.1 421 NREQFLLAIEYYQTILDLDPKQGEIWSALGHCYLMRDDLSRAYSAYRQALYHLKD 475
                 444444689999***********************************99888875 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.05
                 -HHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHTT-HHHHHHHHHHH CS
        BTAD  77 raeealaelealvaehPlrErlhrqlmrAlarsGrqaeALevYerl 122
                   + a+++l++ +++++++ +++ ++ r++ ++ + ++A e+Y+++
  EPX71174.1 606 NQDLAIQYLTKSLEADDTDAQSWYLIGRCYVAQQKYNKAYEAYQQA 651
                 5667899*************************************97 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.0087
                 HTT-HHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHT.T-HHHHHHHHHHHH CS
        BTAD  74 rlGraeealaelealvaehPlrErlhrqlmrAlars.GrqaeALevYerlr 123
                 +++++++al+ ++++++++P+  + +  l + +  + ++ ++AL +Y+r+ 
  EPX71174.1 671 QINQYQDALDAYSRAIRLNPYISEVWYDLGTLYESChNQISDALDAYQRAA 721
                 578999***************9999999987776552777********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1103 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1869  (0.104245); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                       114  (0.00635841); expected 17.9 (0.001)
Passed Fwd filter:                        60  (0.00334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 1.62u 0.38s 00:00:02.00 Elapsed: 00:00:00.64
# Mc/sec: 5229.89
//
Query:       EPX71175.1  [L=364]
Description: methylthioribose-1-phosphate isomerase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-71  241.4   0.4    1.2e-71  241.2   0.4    1.0  1  IF-2B     Initiation factor 2 subunit family


Domain annotation for each model (and alignments):
>> IF-2B  Initiation factor 2 subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  241.2   0.4   6.8e-76   1.2e-71       1     281 [.      44     349 ..      44     350 .. 0.97

  Alignments for each domain:
  == domain 1  score: 241.2 bits;  conditional E-value: 6.8e-76
                 SS-SHHHHHHHHHHHHHHHHHHCCCSTHHHHHHHHHHHHHHHHTSSTS-HHHHHHHHHHHHHHHCCTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       IF-2B   1 kvrGspaiaiaalevllevikdaktskvaeLkeelrkaidlLkkarPtavslgnairrllkeiselksssdvkeakksliekikelikeieeadekigd 99 
                 +vrG+pai+i+a+ +++  +k+ +  ++++ k  + +++++Lk++rPtav+l+ a   l +       s + +++k+++i++++ +++++++ +++ig+
  EPX71175.1  44 QVRGAPAIGIVAALSVAVGLKNLE--EGKNAKDFVIDSLEYLKQSRPTAVNLFEASHILQN----AARSVHPSQVKEKVIQEAEAILDRDLRDNHAIGA 136
                 79***********99999998887..67777788999*******************99999....467888899************************* PP

                 HHHTTC.......-TTEEEEEES--SH........HHHHHHHHHHTTEEEEEEEEEXTTTTHH.HTHHHHHHHTTXEEEEEEGGGHHHHHHCTESEEEE CS
       IF-2B 100 iaaeli.......kdgdtilTicnskt........vlevlraaakekkkfkVivvEsrPrlqG.rltakeLvqagipvtlitdsavayvmseevdkviv 182
                 ++++++       k + tilT+cn+++        +l+v+ra+ +++   + +++E+rP++qG rlta eLv++ ip tl+tds++a +m++ +d+++v
  EPX71175.1 137 AGRQFLlnhykgtKTKLTILTHCNTGSlatsgygtALGVIRALYENGNLEHAFCTETRPYNQGsRLTAFELVHDRIPATLVTDSTAASIMHK-IDAIVV 234
                 ********************************************************************************************.****** PP

                 EXSEEETTSEEEEETTHHHHHHHHHHTTXEEEEEXXGGGBESTSSSGGGSSXXBEXTHHHHEETTEESSTT................TEEEEEBSEEEE CS
       IF-2B 183 GAdrilenGaiankiGTsslAvlAkefnipvlvvaeslkfservqldedifieerdpeellnitgeriaee................elkvvnpafDvt 265
                 GAdr+++nG++ankiGT++lA+lA++fnip++v+a+++ ++ +++ +++i ie r++ e++ ++g+ ++++                 +++++pafDvt
  EPX71175.1 235 GADRVTKNGDTANKIGTLNLAILANHFNIPFIVAAPFSSIDLNLASGSQITIEQRPSIEMVTVRGPVVKNSdatefgdaervhiaapGINTYCPAFDVT 333
                 *******************************************************************9999**************************** PP

                 EGGGXSEEEETTEEEX CS
       IF-2B 266 PpelItliITevGvlp 281
                 P++lI ++ Te+G ++
  EPX71175.1 334 PAKLIAAVATEKGYFT 349
                 *************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (364 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       403  (0.0224776); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2547.36
//
Query:       EPX71176.1  [L=227]
Description: ribosomal protein subunit S10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.8e-26   91.2   0.0    5.6e-26   90.6   0.0    1.3  1  Ribosomal_S10  Ribosomal protein S10p/S20e


Domain annotation for each model (and alignments):
>> Ribosomal_S10  Ribosomal protein S10p/S20e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.6   0.0   3.1e-30   5.6e-26       1      96 [.      71     166 ..      71     168 .. 0.95

  Alignments for each domain:
  == domain 1  score: 90.6 bits;  conditional E-value: 3.1e-30
                    EEEEEESSHHHHHHHHHHHHHHTTSSS-EE---EEEEEEEEEEEEE--SS--S--EEEEEEEEEEEEEEEE.E-HHHHHHHS-...S---SS-EEE CS
  Ribosomal_S10   1 rirlkSydsklLekavkkivraakelgikvkgpvplPtkrkrvtvlksphvdkksreqfeirthkRlidisdatketidtllkllqlnlpegVsve 96 
                    ++r+kSy+ + L+ ++++i+raa++++i+++gp plP+k++++t+l+sp+v+k s+e+fe+ th Rl+++++ ++++++ +l ++++n ++   +e
     EPX71176.1  71 TLRIKSYETNELDFYSDFICRAAYYMKIPMRGPRPLPKKVESWTLLRSPFVHKGSQENFERITHTRLFKLYNINPSQLEIFLAYVRKNNMPSLTLE 166
                    589***********************************************************************************9977766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       333  (0.0185733); expected 358.6 (0.02)
Passed bias filter:                      284  (0.0158403); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.44
# Mc/sec: 1556.29
//
Query:       EPX71177.1  [L=801]
Description: complexed with Cdc5 protein Cwf3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-22   81.1  17.1    1.8e-05   24.9   0.7    6.2  5  Suf            Suppressor of forked protein (Suf)
    3.4e-16   58.6   3.1        0.9   10.5   0.0   10.7 12  TPR_14         Tetratricopeptide repeat
    2.7e-06   27.6   2.2        2.5    8.4   0.0    6.3  7  TPR_12         Tetratricopeptide repeat
    1.3e-05   24.5   9.0     0.0021   17.3   0.3    4.4  5  NRDE-2         NRDE-2, necessary for RNA interference
    1.7e-05   24.8  14.7       0.21   11.6   0.1    6.8  8  Mad3_BUB1_I    Mad3/BUB1 homology region 1
    1.8e-05   24.1   1.5        3.1    6.9   0.0    5.2  5  TPR_15         Tetratricopeptide repeat
    3.7e-05   23.6   7.2        1.2    9.5   0.0    6.6  6  TPR_8          Tetratricopeptide repeat
    0.00035   21.0   0.0        7.8    7.1   0.0    5.3  5  TPR_19         Tetratricopeptide repeat
     0.0022   17.7   1.2      0.035   13.8   0.0    3.3  4  RPN7           26S proteasome subunit RPN7
  ------ inclusion threshold ------
      0.013   16.4   0.2        5.3    8.0   0.0    3.4  3  Cytochrom_C_2  Cytochrome C'
      0.026   14.7   0.6         29    4.8   0.0    3.7  3  Mad3_BUB1_I_2  Putative Mad3/BUB1 like region 1 protein
      0.034   14.4   0.9         10    6.6   0.1    4.4  4  PPR            PPR repeat
      0.044   13.9  18.4        2.7    8.3   0.1    8.1 10  TPR_2          Tetratricopeptide repeat
       0.12   12.0   0.0       0.22   11.2   0.0    1.3  1  Corona_I       Corona nucleocapsid I protein


Domain annotation for each model (and alignments):
>> Suf  Suppressor of forked protein (Suf)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.0   5.4e-08   6.9e-05      59     132 ..      98     169 ..      94     187 .. 0.85
   2 !    6.1   0.3    0.0077       9.9      55     122 ..     238     306 ..     203     309 .. 0.77
   3 !   22.5   1.5   7.3e-08   9.4e-05      70     136 ..     390     509 ..     387     517 .. 0.96
   4 !   24.9   0.7   1.4e-08   1.8e-05      56     141 ..     534     624 ..     529     665 .. 0.78
   5 !    7.8   0.0    0.0022       2.8      73     128 ..     664     718 ..     644     737 .. 0.84

  Alignments for each domain:
  == domain 1  score: 23.0 bits;  conditional E-value: 5.4e-08
         Suf  59 FelGlKkFpedeefvlkYldyLislnddnnaRvlfekvvsklskekeakelykkfleyestfgdlssilklekR 132
                 Fe++l + +  +     Yl++L++  d++++R +f+ ++++l   +   +++  +le++ ++g l  i+ + +R
  EPX71177.1  98 FERALVLLHRMPVIWHMYLKFLMQQADVTKVRKVFDASLRALPVTQ-HDDIWMLYLEFAEEIGGLFCIH-VYRR 169
                 77777777888888889**************************999.9***************998886.4445 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0077
         Suf  55 AtkIFelGlKkFped.eefvlkYldyLislnddnnaRvlfekvvsklskekeakelykkfleyestfgd 122
                   ++F  G+ +++++ ++  +   +y i+l   ++aR++f + +++++  ++  ++++  +e+e +  +
  EPX71177.1 238 VERVFRAGIHRYTDQaGKLWVSLAQYYIRLGFYEKARSIFYEGITTVMTVRNFTQVFDAAVEFEEQWLS 306
                 368999999999987257888999************************9999************99765 PP

  == domain 3  score: 22.5 bits;  conditional E-value: 7.3e-08
         Suf  70 eefvlkYldyLislnddnnaRvlfekvvsklskeke.....................................................akelykkfle 115
                 + f  ++ ++  ++ d+++a+v+fek+ + + +  +                                                     + +++ ++l+
  EPX71177.1 390 GSFFSNFAKFYENIGDVQQAKVIFEKATNVPYSSVNelaqvwidwaemelrhqnfenarklighavkapkrseisffdealspqvrlhkSAKIWMYYLD 488
                 5789999***********************9888888************************************************************** PP

         Suf 116 yestfgdlssilklekRmeel 136
                  e   g+l+s+ kl +Rm el
  EPX71177.1 489 LEESVGSLDSTRKLYDRMFEL 509
                 ******************987 PP

  == domain 4  score: 24.9 bits;  conditional E-value: 1.4e-08
         Suf  56 tkIFelGlKkFpedeef...vlkYldyLisln..ddnnaRvlfekvvsklskekeakelykkfleyestfgdls.silklekRmeelfpeds 141
                 +kI+e+G+ +F+  ++f   +l  +++  +      ++ R lfe++++   +e  +k++y  +++ye ++g ++ si  lek ++e+ p+d 
  EPX71177.1 534 FKIYERGVALFSYPIAFelwTLYLVKFIERYKgkQFERGRDLFEQALEGCPSEF-SKSIYLLYADYEENYGKVKrSISILEKALKEVTPKDR 624
                 89***********9999332334457776654114578899*************.****************98648999**********963 PP

  == domain 5  score: 7.8 bits;  conditional E-value: 0.0022
         Suf  73 vlkYldyLislnddnnaRvlfekvvsklskekeakelykkfleyestfgdlssilk 128
                  l+Y +  ++l + ++aR++f +  +   +     e ++++ ++e ++g+ ++++k
  EPX71177.1 664 CLRYAEMETRLGEIDRARAIFTHGSQYCDPRV-ETEYWQRWQDFELKYGNPEETVK 718
                 57788888899999***********9999999.899*************9887776 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1         3   3.9e+03      21      43 ..      51      73 ..      32      74 .. 0.76
   2 !   10.5   0.0    0.0007       0.9       3      42 ..     111     152 ..     109     154 .. 0.90
   3 ?   -1.9   0.0       7.1     9e+03      23      36 ..     166     179 ..     164     196 .. 0.79
   4 ?   -1.4   0.0       4.7   6.1e+03       4      28 ..     178     202 ..     175     204 .. 0.79
   5 !    7.1   0.0    0.0092        12       3      28 ..     256     281 ..     255     286 .. 0.88
   6 ?   -1.3   0.0       4.5   5.7e+03       8      27 ..     397     416 ..     396     418 .. 0.90
   7 ?    2.2   0.0      0.32   4.1e+02       2      32 ..     429     458 ..     428     464 .. 0.83
   8 ?    1.3   0.0      0.66   8.4e+02       3      29 ..     482     508 ..     480     516 .. 0.88
   9 !    8.9   0.0    0.0023         3       7      41 ..     520     556 ..     514     560 .. 0.80
  10 ?    3.6   0.0      0.12   1.5e+02      14      33 ..     566     585 ..     551     588 .. 0.81
  11 ?    6.3   0.0     0.016        20       4      35 ..     592     624 ..     590     634 .. 0.87
  12 ?    4.5   0.0     0.059        76       5      24 ..     665     684 ..     662     703 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 3
      TPR_14 21 iallrralalaPddaeawlllaq 43
                + l++ra+   P++  +w ++ +
  EPX71177.1 51 VLLYERACLELPGSYKIWKAYLE 73
                55899999999999999998876 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.0007
      TPR_14   3 allalaeallalGdpdeAiallrralalaP..ddaeawllla 42 
                  + +++++l+++ d  + ++++++ l++ P  +++++w+l+ 
  EPX71177.1 111 IWHMYLKFLMQQADVTKVRKVFDASLRALPvtQHDDIWMLYL 152
                 699*************************99988889998886 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 7.1
      TPR_14  23 llrralalaPddae 36 
                 ++rr+++l P   e
  EPX71177.1 166 VYRRYIQLEPRAVE 179
                 68999999997655 PP

  == domain 4  score: -1.4 bits;  conditional E-value: 4.7
      TPR_14   4 llalaeallalGdpdeAiallrral 28 
                    + e+l +l+ + eA++ + ++l
  EPX71177.1 178 VESYIEVLINLELWNEAAKQYLDIL 202
                 5568899999999999999988775 PP

  == domain 5  score: 7.1 bits;  conditional E-value: 0.0092
      TPR_14   3 allalaeallalGdpdeAiallrral 28 
                 ++  la+++ +lG +++A+ ++ + +
  EPX71177.1 256 LWVSLAQYYIRLGFYEKARSIFYEGI 281
                 7999***************9887765 PP

  == domain 6  score: -1.3 bits;  conditional E-value: 4.5
      TPR_14   8 aeallalGdpdeAiallrra 27 
                 a+++++ Gd ++A  ++++a
  EPX71177.1 397 AKFYENIGDVQQAKVIFEKA 416
                 789**********9999988 PP

  == domain 7  score: 2.2 bits;  conditional E-value: 0.32
      TPR_14   2 eallalaeallalGdpdeAiallrralalaP 32 
                 +++ + ae +l+ ++++ A++l   a++ aP
  EPX71177.1 429 QVWIDWAEMELRHQNFENARKLIGHAVK-AP 458
                 57999****************9877755.55 PP

  == domain 8  score: 1.3 bits;  conditional E-value: 0.66
      TPR_14   3 allalaeallalGdpdeAiallrrala 29 
                  ++ ++++++  G +d  ++l++r+ +
  EPX71177.1 482 IWMYYLDLEESVGSLDSTRKLYDRMFE 508
                 79999*******************976 PP

  == domain 9  score: 8.9 bits;  conditional E-value: 0.0023
      TPR_14   7 laeallalGdpdeAiallrralala..Pddaeawlll 41 
                 +a +l+++G ++++ ++++r +al+  P   e+w+l+
  EPX71177.1 520 YANFLEENGFYEDSFKIYERGVALFsyPIAFELWTLY 556
                 89*********************96336556777554 PP

  == domain 10  score: 3.6 bits;  conditional E-value: 0.12
      TPR_14  14 lGdpdeAiallrralalaPd 33 
                   ++++ ++l+++al+ +P+
  EPX71177.1 566 GKQFERGRDLFEQALEGCPS 585
                 569*************9997 PP

  == domain 11  score: 6.3 bits;  conditional E-value: 0.016
      TPR_14   4 llalaeallalGdpdeAiallrralal.aPdda 35 
                 +l++a+++++ G+ +++i +l++al+   P+d+
  EPX71177.1 592 YLLYADYEENYGKVKRSISILEKALKEvTPKDR 624
                 799**********************95478775 PP

  == domain 12  score: 4.5 bits;  conditional E-value: 0.059
      TPR_14   5 lalaeallalGdpdeAiall 24 
                 l++ae + +lG+ d+A+a++
  EPX71177.1 665 LRYAEMETRLGEIDRARAIF 684
                 789**************988 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.1   0.0     0.005       6.4       4      28 ..     255     279 ..     252     283 .. 0.87
   2 ?   -1.3   0.0       2.2   2.8e+03       8      29 ..     395     416 ..     391     419 .. 0.74
   3 ?    0.7   0.0      0.51   6.5e+02       2      30 ..     427     455 ..     426     458 .. 0.87
   4 !    8.4   0.0     0.002       2.5       7      73 ..     518     581 ..     511     585 .. 0.67
   5 ?    3.2   0.0     0.087   1.1e+02      17      72 ..     567     616 ..     550     617 .. 0.66
   6 ?   -2.7   0.0       5.9   7.5e+03      26      32 ..     648     654 ..     628     658 .. 0.68
   7 ?    0.9   0.0      0.45   5.8e+02       8      27 ..     666     685 ..     662     690 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.005
      TPR_12   4 talnnlaavlrrlgrydeAlellek 28 
                 ++++ la+ + rlg y++A++++ +
  EPX71177.1 255 KLWVSLAQYYIRLGFYEKARSIFYE 279
                 57889***************99975 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 2.2
      TPR_12   8 nlaavlrrlgrydeAlelleka 29 
                 n a ++   g+ ++A  ++eka
  EPX71177.1 395 NFAKFYENIGDVQQAKVIFEKA 416
                 6677788888888888888877 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.51
      TPR_12   2 vatalnnlaavlrrlgrydeAlellekal 30 
                 +a+++  +a++++r ++++ A++l  +a+
  EPX71177.1 427 LAQVWIDWAEMELRHQNFENARKLIGHAV 455
                 6888999***************9988776 PP

  == domain 4  score: 8.4 bits;  conditional E-value: 0.002
      TPR_12   7 nnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyr.algryeeAlelleeala 73 
                 +n+a++l + g y+++++++e+ ++++ +++    + +++tl+    + r + +++e  ++l+e+al+
  EPX71177.1 518 VNYANFLEENGFYEDSFKIYERGVALF-SYPI---AFELWTLYLVKFIERyKGKQFERGRDLFEQALE 581
                 499*******************99988.3322...245555555555543144556666666666665 PP

  == domain 5  score: 3.2 bits;  conditional E-value: 0.087
      TPR_12  17 grydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleeal 72 
                 ++++  ++l+e+ale +     p ++   +++  ++++ +  g+ +  +++le+al
  EPX71177.1 567 KQFERGRDLFEQALEGC-----P-SEFSKSIYLLYADYEENYGKVKRSISILEKAL 616
                 44888899999998888.....3.34456677777777766677777777777776 PP

  == domain 6  score: -2.7 bits;  conditional E-value: 5.9
      TPR_12  26 lekalei 32 
                 +eka+ei
  EPX71177.1 648 YEKAIEI 654
                 3333333 PP

  == domain 7  score: 0.9 bits;  conditional E-value: 0.45
      TPR_12   8 nlaavlrrlgrydeAlelle 27 
                 ++a++++rlg+ d A++++ 
  EPX71177.1 666 RYAEMETRLGEIDRARAIFT 685
                 57899999999999999886 PP

>> NRDE-2  NRDE-2, necessary for RNA interference
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.3   1.6e-06    0.0021      39     136 ..      39     140 ..       8     154 .. 0.79
   2 ?   -2.5   0.0       1.6   2.1e+03     153     179 ..     250     276 ..     192     280 .. 0.67
   3 !    8.9   0.2   0.00059      0.75      18     135 ..     429     583 ..     422     593 .. 0.85
   4 ?    0.4   0.0      0.22   2.8e+02      42      62 ..     600     620 ..     586     634 .. 0.81
   5 ?   -3.6   0.0       3.7   4.8e+03     153     180 ..     657     684 ..     647     709 .. 0.68

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 1.6e-06
      NRDE-2  39 skserkalaeiklsilekAleknksn....pdserLllelLklgseiwdse...klakeWeellkenpnsvkLWreyldfrqsnfasfsvekvkelyek 130
                  ++++ +++e+++ ++e+A  + +++    +   +L+l++L+ +s + +++    ++  +e++l        +W+ yl+f +++     v+kv++++  
  EPX71177.1  39 LSARENSTLEKRVLLYERACLELPGSykiwKAYLELRLAHLEGASFVTNQQaflDVNGCFERALVLLHRMPVIWHMYLKFLMQQAD---VTKVRKVFDA 134
                 44556789************99988888888999999999999999999996666999*************************665...5555555555 PP

      NRDE-2 131 clrtls 136
                  lr+l 
  EPX71177.1 135 SLRALP 140
                 555554 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.6
      NRDE-2 153 eeellyvllrlcrflrqaGysErAval 179
                  +++ ++ ++l+++    G+ E+A ++
  EPX71177.1 250 TDQAGKLWVSLAQYYIRLGFYEKARSI 276
                 445555666666677777777777666 PP

  == domain 3  score: 8.9 bits;  conditional E-value: 0.00059
      NRDE-2  18 daWlelvefQdellsaeee.slskserkalaeiklsilekAleknksnpdserLllelLklgseiwdseklakeWeellk................... 96 
                 + W++ +e+     + e+  +l  ++ ka     +s +++Al+ + +  +s ++ +++L l +++ + + ++k ++++++                   
  EPX71177.1 429 QVWIDWAEMELRHQNFENArKLIGHAVKAPKRSEISFFDEALSPQVRLHKSAKIWMYYLDLEESVGSLDSTRKLYDRMFElkiatpqvvvnyanfleen 527
                 567777777665544444465666677788888999999***9999999***************99999999999999999999999999999999999 PP

      NRDE-2  97 .................enpnsvkLWreyldfrqsnfasfsvekvkelyekclrtl 135
                                  ++p  ++LW+ yl   +++ +  ++e+ ++l+e++l+  
  EPX71177.1 528 gfyedsfkiyergvalfSYPIAFELWTLYLVKFIERYKGKQFERGRDLFEQALEGC 583
                 99999999999999999**********************************99865 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.22
      NRDE-2  42 erkalaeiklsilekAleknk 62 
                 e++  +++ +silekAl++ +
  EPX71177.1 600 ENYGKVKRSISILEKALKEVT 620
                 555667899*********983 PP

  == domain 5  score: -3.6 bits;  conditional E-value: 3.7
      NRDE-2 153 eeellyvllrlcrflrqaGysErAvalw 180
                  ee+ +v lr+++++   G  +rA a++
  EPX71177.1 657 DEEVKDVCLRYAEMETRLGEIDRARAIF 684
                 4555666666666666666666666665 PP

>> Mad3_BUB1_I  Mad3/BUB1 homology region 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1       1.5   1.9e+03      20      36 ..      32      48 ..      18      79 .. 0.60
   2 ?   -2.9   0.1         5   6.4e+03      69      86 ..     147     164 ..     145     200 .. 0.55
   3 ?    3.4   0.1     0.054        70      95     124 .]     252     281 ..     216     281 .. 0.88
   4 !    8.3   0.0    0.0017       2.2      96     123 ..     389     416 ..     370     417 .. 0.90
   5 ?    3.8   0.0     0.043        55      94     122 ..     425     453 ..     422     455 .. 0.88
   6 !   11.6   0.1   0.00017      0.21      68     124 .]     481     541 ..     477     541 .. 0.90
   7 ?    0.9   0.1      0.33   4.2e+02      96     123 ..     588     615 ..     557     616 .. 0.78
   8 ?    1.6   0.1      0.21   2.6e+02      36      60 ..     600     625 ..     585     687 .. 0.53

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 1.5
                 HHHHHHHHHHHHHH-TT CS
  Mad3_BUB1_I 20 Lelwlryikwieesypq 36
                 L+ wlry++  e+s  +
   EPX71177.1 32 LRSWLRYLSARENSTLE 48
                 56666666655555443 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 5
                  HHHHHHTTSS-HHHHHHH CS
  Mad3_BUB1_I  69 lwlkyadlveepreifkf 86 
                  +w+ y ++ ee   +f  
   EPX71177.1 147 IWMLYLEFAEEIGGLFCI 164
                  677777777666666653 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.054
                  TBHHHHHHHHHHHHHTT-HHHHHHHHHHH. CS
  Mad3_BUB1_I  95 klalfYeewAellekkgrfkeAeevyelGi 124
                  +  +++ + A+++ + g +++A++++ +Gi
   EPX71177.1 252 QAGKLWVSLAQYYIRLGFYEKARSIFYEGI 281
                  667899********************9998 PP

  == domain 4  score: 8.3 bits;  conditional E-value: 0.0017
                  BHHHHHHHHHHHHHTT-HHHHHHHHHHH CS
  Mad3_BUB1_I  96 lalfYeewAellekkgrfkeAeevyelG 123
                  l  f+ ++A+++e+ g++++A+ ++e++
   EPX71177.1 389 LGSFFSNFAKFYENIGDVQQAKVIFEKA 416
                  6789*********************986 PP

  == domain 5  score: 3.8 bits;  conditional E-value: 0.043
                  TTBHHHHHHHHHHHHHTT-HHHHHHHHHH CS
  Mad3_BUB1_I  94 tklalfYeewAellekkgrfkeAeevyel 122
                  ++la+ +++wAe+  ++++f++A++++ +
   EPX71177.1 425 NELAQVWIDWAEMELRHQNFENARKLIGH 453
                  5799*******************998765 PP

  == domain 6  score: 11.6 bits;  conditional E-value: 0.00017
                  HHHHHHHTTS......S-HHHHHHHHHHHTTSTTBHHHHHHHHHHHHHTT-HHHHHHHHHHH. CS
  Mad3_BUB1_I  68 klwlkyadlv......eepreifkflaskkiGtklalfYeewAellekkgrfkeAeevyelGi 124
                  k+w+ y dl       ++ r++++ +++ ki t   +   ++A++le++g ++++ ++ye+G+
   EPX71177.1 481 KIWMYYLDLEesvgslDSTRKLYDRMFELKIATP--QVVVNYANFLEENGFYEDSFKIYERGV 541
                  899999999888899999*************986..5668*********************96 PP

  == domain 7  score: 0.9 bits;  conditional E-value: 0.33
                  BHHHHHHHHHHHHHTT-HHHHHHHHHHH CS
  Mad3_BUB1_I  96 lalfYeewAellekkgrfkeAeevyelG 123
                     +Y  +A + e+ g++k++ +++e++
   EPX71177.1 588 SKSIYLLYADYEENYGKVKRSISILEKA 615
                  5678999****************99987 PP

  == domain 8  score: 1.6 bits;  conditional E-value: 0.21
                  T.-T.TT-HHHHHHHHHHHTTTSGGG CS
  Mad3_BUB1_I  36 q.sskesgllellerclkkfkdderY 60 
                  +  +k ++ +++le++lk++  ++rY
   EPX71177.1 600 EnYGKVKRSISILEKALKEVTPKDRY 625
                  32233444555555555555555555 PP

>> TPR_15  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.1     0.099   1.3e+02     110     198 ..     109     193 ..     106     220 .. 0.77
   2 ?   -3.2   0.0       2.9   3.7e+03     213     233 ..     253     273 ..     245     282 .. 0.54
   3 !    6.9   0.0    0.0024       3.1     112     178 ..     392     460 ..     326     464 .. 0.91
   4 !    5.4   0.0    0.0069       8.9      45     174 ..     481     617 ..     468     624 .. 0.63
   5 ?    3.3   0.0      0.03        39       9      50 ..     662     703 ..     654     712 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.099
      TPR_15 110 prlLssalellerakdydriaellksleeeeaaeqsaafllaraelyrqegqtdaAlrdyreAlalapdsselraallWlliDlgrrae 198
                 p ++  +l+ l ++ d++++++++    +   + q   +++++ e++++ g     +++yr+ ++l+p    + + ++ +li+l+  +e
  EPX71177.1 109 PVIWHMYLKFLMQQADVTKVRKVFDASLRALPVTQHDDIWMLYLEFAEEIGGL-FCIHVYRRYIQLEPR---AVESYIEVLINLELWNE 193
                 66788999999999999999999999777777888899999999999988854.578888888888887...55566666665555544 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 2.9
      TPR_15 213 dasLwgplaaAlllLgrpkkA 233
                   +Lw  la  + +Lg ++kA
  EPX71177.1 253 AGKLWVSLAQYYIRLGFYEKA 273
                 444555555555555555554 PP

  == domain 3  score: 6.9 bits;  conditional E-value: 0.0024
      TPR_15 112 lLssalellerakdydriaellksle..eeeaaeqsaafllaraelyrqegqtdaAlrdyreAlalapd 178
                 ++s+  + +e+ +d+++ + ++++++  +++ +++ a++++  ae++++  + ++A +++  A++++  
  EPX71177.1 392 FFSNFAKFYENIGDVQQAKVIFEKATnvPYSSVNELAQVWIDWAEMELRHQNFENARKLIGHAVKAPKR 460
                 56677889*****************95568889******************************998766 PP

  == domain 4  score: 5.4 bits;  conditional E-value: 0.0069
      TPR_15  45 eyWrtladLAwalqqedearkAyrqLlasgkaraedyerliel.lydaepkeaarlaekgwrrfrsprlLss.alell.....erakdydriaellksl 136
                 + W  + dL  ++ + d++rk y ++ + + a+++   +  ++  ++  ++++ ++ e g   f  p  ++   l+l+     ++ k+++r ++l++++
  EPX71177.1 481 KIWMYYLDLEESVGSLDSTRKLYDRMFELKIATPQVVVNYANFlEENGFYEDSFKIYERGVALFSYPIAFELwTLYLVkfierYKGKQFERGRDLFEQA 579
                 556666666666666777777777777777777777777777633555566666666666555555543332112222111112346677778888887 PP

      TPR_15 137 eeeeaaeqsaafllaraelyrqegqtdaAlrdyreAla 174
                  e    e s  ++l++a ++++ g+ ++++ ++++Al+
  EPX71177.1 580 LEGCPSEFSKSIYLLYADYEENYGKVKRSISILEKALK 617
                 77777788888888899999999999999999999886 PP

  == domain 5  score: 3.3 bits;  conditional E-value: 0.03
      TPR_15   9 nealklatllykqgdvkkAlevLkeaaqkaapskdteyWrtl 50 
                 +  l++a++  + g++++A ++   + q  +p  +teyW+  
  EPX71177.1 662 DVCLRYAEMETRLGEIDRARAIFTHGSQYCDPRVETEYWQRW 703
                 344799*********************************965 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.1    0.0023       2.9       2      27 ..     255     280 ..     254     282 .. 0.89
   2 !    9.5   0.0   0.00096       1.2       6      28 ..     395     417 ..     391     420 .. 0.91
   3 ?   -1.5   0.0       3.3   4.2e+03       5      28 ..     518     541 ..     515     543 .. 0.84
   4 ?    1.6   0.7      0.33   4.2e+02       3      29 ..     591     617 ..     590     618 .. 0.87
   5 ?   -1.1   0.0       2.4   3.1e+03      23      30 ..     647     654 ..     645     656 .. 0.77
   6 ?   -0.6   0.0       1.7   2.2e+03       3      25 ..     663     685 ..     662     689 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0023
                 CHHHHHHHHHHHTT-HHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyeka 27 
                 ++++ l++ y+ lg ye+A + + + 
  EPX71177.1 255 KLWVSLAQYYIRLGFYEKARSIFYEG 280
                 689*****************999765 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00096
                 HHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_8   6 nlgsiylklgdyeeAkeyyekal 28 
                 n ++ y++ gd ++Ak  +eka+
  EPX71177.1 395 NFAKFYENIGDVQQAKVIFEKAT 417
                 67899*****************7 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 3.3
                 HHHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_8   5 ynlgsiylklgdyeeAkeyyekal 28 
                 +n ++ +++ g ye + + ye+ +
  EPX71177.1 518 VNYANFLEENGFYEDSFKIYERGV 541
                 688999999999********9876 PP

  == domain 4  score: 1.6 bits;  conditional E-value: 0.33
                 HHHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyekale 29 
                 +y++ ++  ++ g+ + +++ +ekal+
  EPX71177.1 591 IYLLYADYEENYGKVKRSISILEKALK 617
                 678888888888999**********97 PP

  == domain 5  score: -1.1 bits;  conditional E-value: 2.4
                 HHHHHHHH CS
       TPR_8  23 yyekalel 30 
                  yeka+e+
  EPX71177.1 647 IYEKAIEI 654
                 58888886 PP

  == domain 6  score: -0.6 bits;  conditional E-value: 1.7
                 HHHHHHHHHHHTT-HHHHHHHHH CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyye 25 
                 ++++ +     lg+++ A + + 
  EPX71177.1 663 VCLRYAEMETRLGEIDRARAIFT 685
                 67778888889********9986 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       6.3   8.1e+03      27      56 ..     111     140 ..      98     144 .. 0.74
   2 ?    1.7   0.0      0.28   3.6e+02      26      47 ..     255     276 ..     246     277 .. 0.85
   3 ?    1.9   0.0      0.26   3.3e+02      31      52 ..     396     417 ..     391     457 .. 0.80
   4 ?    2.0   0.0      0.23     3e+02       6      54 ..     568     618 ..     564     625 .. 0.84
   5 !    7.1   0.0    0.0061       7.8      12      48 ..     646     684 ..     642     689 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 6.3
      TPR_19  27 arllLAeallalgqldeAealLdalpeedp 56 
                 ++  + + l+++ ++++ +++ da +++ p
  EPX71177.1 111 IWHMYLKFLMQQADVTKVRKVFDASLRALP 140
                 555667788999999999999988887765 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.28
      TPR_19  26 earllLAeallalgqldeAeal 47 
                  ++  LA+ ++ lg +++A+ +
  EPX71177.1 255 KLWVSLAQYYIRLGFYEKARSI 276
                 567789*************976 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.26
      TPR_19  31 LAeallalgqldeAealLdalp 52 
                  A+ + + g++++A+ + +++ 
  EPX71177.1 396 FAKFYENIGDVQQAKVIFEKAT 417
                 5777888888888888877665 PP

  == domain 4  score: 2.0 bits;  conditional E-value: 0.23
      TPR_19   6 dyaeAlalleqalqedpk..naearllLAeallalgqldeAealLdalpee 54 
                 ++++  +l+eqal+  p   +  + ll+A+   + g ++  + +L+++++e
  EPX71177.1 568 QFERGRDLFEQALEGCPSefSKSIYLLYADYEENYGKVKRSISILEKALKE 618
                 666677899****99999989999999999999999999999999998876 PP

  == domain 5  score: 7.1 bits;  conditional E-value: 0.0061
      TPR_19  12 alleqalqe..dpknaearllLAeallalgqldeAealL 48 
                 +++e+a++   d +  ++ l++Ae    lg++d A+a+ 
  EPX71177.1 646 PIYEKAIEIlnDEEVKDVCLRYAEMETRLGEIDRARAIF 684
                 6788888884455589999999**************986 PP

>> RPN7  26S proteasome subunit RPN7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       1.1   1.4e+03      38      59 ..     256     277 ..     241     294 .. 0.79
   2 !   13.8   0.0   2.7e-05     0.035      41     105 ..     395     460 ..     388     545 .. 0.83
   3 ?   -1.6   0.1       1.5   1.9e+03      48      89 ..     601     640 ..     590     684 .. 0.56
   4 ?   -1.9   0.0       1.8   2.3e+03      12      47 ..     656     691 ..     646     695 .. 0.69

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 1.1
                 HHHHHHHHHHHCT-HHHHHHHH CS
        RPN7  38 akldlaehYlkigdleeAlkay 59 
                 ++  la++Y++ g +e+A   +
  EPX71177.1 256 LWVSLAQYYIRLGFYEKARSIF 277
                 5677899999999999987655 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 2.7e-05
                 HHHHHHHHCT-HHHHHHHHHT.CCCC--SHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHCSSS- CS
        RPN7  41 dlaehYlkigdleeAlkaysr.ireyctslkhkidmllnlirvaiffndwdlvskylekakellek 105
                 ++a++Y +igd+++A   +++ +  + +s +  +++++ + ++++  ++++ + k +  a +  ++
  EPX71177.1 395 NFAKFYENIGDVQQAKVIFEKaTNVPYSSVNELAQVWIDWAEMELRHQNFENARKLIGHAVKAPKR 460
                 689******************888899**************************9999888777776 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 1.5
                 HCT-HHHHHHHHHTCCCC--SHHHHHHHHHHHHHHHHHTT-H CS
        RPN7  48 kigdleeAlkaysrireyctslkhkidmllnlirvaiffndw 89 
                 + g+++ ++  ++++++++t  +     ++n++ ++++fn+ 
  EPX71177.1 601 NYGKVKRSISILEKALKEVTPKDRY--GVFNVLLLKVAFNYG 640
                 4555666666666665555554443..233444444444443 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 1.8
                 HHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
        RPN7  12 nekeleeLdaelkdakenlgkeeirrakldlaehYl 47 
                 n++e+++   ++ + ++ lg+++ +ra    +  Y+
  EPX71177.1 656 NDEEVKDVCLRYAEMETRLGEIDRARAIFTHGSQYC 691
                 667777777777777777777777777666666665 PP

>> Cytochrom_C_2  Cytochrome C'
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.64   8.1e+02      36      87 ..     356     410 ..     343     426 .. 0.80
   2 ?    3.8   0.2      0.08     1e+02      50      96 ..     410     457 ..     364     464 .. 0.74
   3 ?    8.0   0.0    0.0042       5.3      49      95 ..     680     725 ..     657     746 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.64
                    HHHHHHHHHHHCSGGGGC-TTGSS...SSS--B-THHHHTHHHHHHHHHHHHHHH CS
  Cytochrom_C_2  36 aaaaealaalakklpalFpegsdk...gektkakpeiWedkekfkakaaaleeaa 87 
                    +++++ + +  +k+ + ++eg +k   +    ++ +++++ +kf +++ ++++a 
     EPX71177.1 356 QRRTTLVGDDREKIVQTYAEGLQKinpKLSIGSLGSFFSNFAKFYENIGDVQQAK 410
                    556666667778889999999999888667889999***********99999886 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.08
                    GGGC-TTGSS.SSS--B-THHHHTHHHHHHHHHHHHHHHHHHHHHHHC CS
  Cytochrom_C_2  50 palFpegsdk.gektkakpeiWedkekfkakaaaleeaaaeLaaaaka 96 
                    +  F++ ++   +  + ++++W d+++++ + +++e+a + +  a ka
     EPX71177.1 410 KVIFEKATNVpYSSVNELAQVWIDWAEMELRHQNFENARKLIGHAVKA 457
                    557777777764577889999*****9999999999887655466655 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.0042
                    GGGGC-TTGSSSSS--B-THHHHTHHHHHHHHHHHHHHHHHHHHHHH CS
  Cytochrom_C_2  49 lpalFpegsdkgektkakpeiWedkekfkakaaaleeaaaeLaaaak 95 
                      a F+ gs+   + ++++e W+++++f+ k  + ee ++e+ + ++
     EPX71177.1 680 ARAIFTHGSQYC-DPRVETEYWQRWQDFELKYGNPEETVKEMLRIKR 725
                    4589*******6.9*****************9999999998876655 PP

>> Mad3_BUB1_I_2  Putative Mad3/BUB1 like region 1 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0     0.022        29      49      75 ..     257     283 ..     249     306 .. 0.87
   2 ?    3.0   0.0     0.081     1e+02      40      77 ..     385     421 ..     337     454 .. 0.69
   3 ?    2.2   0.0      0.14   1.8e+02      42      75 ..     585     618 ..     581     627 .. 0.92

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.022
  Mad3_BUB1_I_2  49 YlelsryFlkkgkkeaalfiLqegikn 75 
                    ++ l++y+++ g+ e+a  i  egi++
     EPX71177.1 257 WVSLAQYYIRLGFYEKARSIFYEGITT 283
                    789*********************985 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.081
  Mad3_BUB1_I_2  40 kIskfyyfvYlelsryFlkkgkkeaalfiLqegiknkv 77 
                    +I+++ +f + ++++++  +g  + a+ i +++ +   
     EPX71177.1 385 SIGSLGSF-FSNFAKFYENIGDVQQAKVIFEKATNVPY 421
                    45655554.789******************99987655 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.14
  Mad3_BUB1_I_2  42 skfyyfvYlelsryFlkkgkkeaalfiLqegikn 75 
                    s+f++ +Yl  ++y    gk + +  iL++++k+
     EPX71177.1 585 SEFSKSIYLLYADYEENYGKVKRSISILEKALKE 618
                    78999**************************986 PP

>> PPR  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0      0.17   2.2e+02      13      26 ..      95     108 ..      94     111 .. 0.92
   2 ?    6.6   0.1    0.0078        10       3      25 ..     257     279 ..     256     281 .. 0.91
   3 ?   -1.7   0.0       3.7   4.7e+03      14      29 ..     494     509 ..     492     511 .. 0.76
   4 ?   -2.1   0.1       4.8   6.2e+03      13      25 ..     527     539 ..     524     539 .. 0.88

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.17
         PPR  13 nGkleeAlelfkeM 26 
                 nG++e Al l+++M
  EPX71177.1  95 NGCFERALVLLHRM 108
                 8************* PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0078
         PPR   3 ynslIsgycknGkleeAlelfke 25 
                 + sl + y + G +e+A ++f e
  EPX71177.1 257 WVSLAQYYIRLGFYEKARSIFYE 279
                 7788899**************87 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 3.7
         PPR  14 GkleeAlelfkeMkek 29 
                 G l+   +l+++M e 
  EPX71177.1 494 GSLDSTRKLYDRMFEL 509
                 56677789*****876 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 4.8
         PPR  13 nGkleeAlelfke 25 
                 nG +e+ ++++++
  EPX71177.1 527 NGFYEDSFKIYER 539
                 89********985 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       9.4   1.2e+04      23      30 ..      97     104 ..      96     105 .. 0.78
   2 ?   -2.6   0.0       6.5   8.4e+03      21      33 ..     164     176 ..     163     177 .. 0.85
   3 ?   -2.7   0.0       7.3   9.4e+03      13      24 ..     187     198 ..     184     202 .. 0.67
   4 ?    8.3   0.1    0.0021       2.7       2      22 ..     255     275 ..     254     277 .. 0.89
   5 ?    2.0   0.0      0.22   2.8e+02       8      27 ..     397     416 ..     392     418 .. 0.87
   6 ?    4.3   0.1     0.041        52       1      29 [.     428     456 ..     428     457 .. 0.90
   7 ?    1.3   0.0      0.39   4.9e+02       6      30 ..     519     543 ..     514     545 .. 0.88
   8 ?    3.0   0.0      0.11   1.4e+02      12      29 ..     564     581 ..     562     584 .. 0.91
   9 ?   -1.7   0.2       3.4   4.3e+03       8      29 ..     596     617 ..     591     618 .. 0.77
  10 ?   -1.1   0.0       2.2   2.8e+03       4      24 ..     664     684 ..     662     687 .. 0.79

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 9.4
       TPR_2  23 afekAlel 30 
                 +fe+Al l
  EPX71177.1  97 CFERALVL 104
                 89999865 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 6.5
       TPR_2  21 leafekAleldPn 33 
                 ++ +++ ++l+P+
  EPX71177.1 164 IHVYRRYIQLEPR 176
                 6789******996 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 7.3
       TPR_2  13 klgdyeeAleaf 24 
                 +l  ++eA++ +
  EPX71177.1 187 NLELWNEAAKQY 198
                 556677888777 PP

  == domain 4  score: 8.3 bits;  conditional E-value: 0.0021
       TPR_2   2 ealynlGlayyklgdyeeAle 22 
                 +++  l++ y++lg ye+A+ 
  EPX71177.1 255 KLWVSLAQYYIRLGFYEKARS 275
                 57999**************96 PP

  == domain 5  score: 2.0 bits;  conditional E-value: 0.22
       TPR_2   8 GlayyklgdyeeAleafekA 27 
                 ++ y++ gd ++A+  fekA
  EPX71177.1 397 AKFYENIGDVQQAKVIFEKA 416
                 6679999************9 PP

  == domain 6  score: 4.3 bits;  conditional E-value: 0.041
       TPR_2   1 aealynlGlayyklgdyeeAleafekAle 29 
                 a+++  +++  ++ +++e A+++   A++
  EPX71177.1 428 AQVWIDWAEMELRHQNFENARKLIGHAVK 456
                 678999****************9888876 PP

  == domain 7  score: 1.3 bits;  conditional E-value: 0.39
       TPR_2   6 nlGlayyklgdyeeAleafekAlel 30 
                 n ++ ++++g ye+  + +e+ ++l
  EPX71177.1 519 NYANFLEENGFYEDSFKIYERGVAL 543
                 7899999*************99988 PP

  == domain 8  score: 3.0 bits;  conditional E-value: 0.11
       TPR_2  12 yklgdyeeAleafekAle 29 
                 yk +++e+ +++fe+Ale
  EPX71177.1 564 YKGKQFERGRDLFEQALE 581
                 67799***********97 PP

  == domain 9  score: -1.7 bits;  conditional E-value: 3.4
       TPR_2   8 GlayyklgdyeeAleafekAle 29 
                 ++  ++ g+ ++ +  +ekAl+
  EPX71177.1 596 ADYEENYGKVKRSISILEKALK 617
                 5666677899999999999998 PP

  == domain 10  score: -1.1 bits;  conditional E-value: 2.2
       TPR_2   4 lynlGlayyklgdyeeAleaf 24 
                 + + ++   +lg+ ++A++ f
  EPX71177.1 664 CLRYAEMETRLGEIDRARAIF 684
                 5667777789*******9877 PP

>> Corona_I  Corona nucleocapsid I protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00017      0.22      72     107 ..     309     345 ..     297     351 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00017
    Corona_I  72 me.splqskrdigidttavllkhlmgsrsnycpdgif 107
                 me +p qsk dig+d     l +l+  rs y  d i+
  EPX71177.1 309 MEnAPSQSKDDIGVDYHLSWLEKLLDQRSLYINDVIL 345
                 54279****************************9886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (801 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       630  (0.0351386); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.73u 0.28s 00:00:01.01 Elapsed: 00:00:00.46
# Mc/sec: 5261.86
//
Query:       EPX71178.1  [L=1478]
Description: guanyl-nucleotide exchange factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-68  229.4   0.4    2.5e-68  229.4   0.4    3.2  3  Sec7      Sec7 domain
    9.9e-21   74.3   0.9    9.7e-20   71.1   0.7    2.9  2  Sec7_N    Guanine nucleotide exchange factor in Golgi transpo


Domain annotation for each model (and alignments):
>> Sec7  Sec7 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1      0.23     2e+03      73     134 ..      95     181 ..      83     183 .. 0.55
   2 ?   -0.6   0.1       0.1   9.1e+02      64      97 ..     292     327 ..     201     396 .. 0.77
   3 !  229.4   0.4   2.8e-72   2.5e-68       2     183 .]     550     733 ..     549     733 .. 0.97

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.23
                 S--TT--HHHHHHHHCCCS-B-SSHHH.....HHHHHHHHHHHHHH.TTC..................TCG.-SHHHHHHHHHHHHH CS
        Sec7  73 fdfsglrldeAlRlflssfrlpgEaqk.....ierilekFaekyfe.qnp..................evf.enadavfvLaysiim 134
                 +d+s+ +    l  fl++++ p          i  il+ F+ + ++ ++p                  e++ +++d v++L +s +m
  EPX71178.1  95 HDLSNFDSLRLLSPFLRTIKSPRTTGNvtslcISAILKFFSLRIITdKSPnlnvamrnlsfaitqcrfESYdSSQDEVVLLRVSRLM 181
                 444444444445555555555543332223449999999999999523333333333333333333332244778888888888776 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.1
                 HHHHHHHCT..S--TT--HHHHHHHHCCCS-B-SSH CS
        Sec7  64 evlkefvdl..fdfsglrldeAlRlflssfrlpgEa 97 
                 +vl +f+d+  ++f+    ++AlR + + f++ gE 
  EPX71178.1 292 RVLISFIDSknHHFTHQVKCMALRFINAAFEVAGEH 327
                 577777764226888888889999999999998886 PP

  == domain 3  score: 229.4 bits;  conditional E-value: 2.8e-72
                 HHHHHHHHHHHHH-HHHHHHHHHHCCCC..TSSHHHHHHHHHHTCCS-HHHHHHHHCSGGHHHHHHHHHHHCTS--TT--HHHHHHHHCCCS-B-SSHH CS
        Sec7   2 kklleeaaekFnkkpkkgikyliekgll..eedpksiakflketpgldkkklGeylgkekefnkevlkefvdlfdfsglrldeAlRlflssfrlpgEaq 98 
                 k l+ e+a++Fn++p++gi+yl ++ ++  ++++ sia+f+++t++l+k+ lGeyl+k +  n+e+l++f+  fdf+g+r+deAlR++l+sfrlpgE+q
  EPX71178.1 550 KFLIIEGANLFNENPNDGISYLSSHSIIehPSESTSIASFFHSTNRLSKRVLGEYLTKAS--NTEILDAFMVAFDFKGKRIDEALRMLLQSFRLPGESQ 646
                 667899**********************88788999************************..************************************* PP

                 HHHHHHHHHHHHHHHTTCTCG-SHHHHHHHHHHHHHHHHHHC-TTS..CCS--HHHHHHCTTTTBTTB---HHHHHHHHHHHHHS-- CS
        Sec7  99 kierilekFaekyfeqnpevfenadavfvLaysiimLntdlhnpqv..kkkmtledFiknnrgindgkdlpeefLeeiYdsIkeeei 183
                  ier++e+Fa+ y+e+np v++++da+fvL+ysiimLntd+hnp++  + +mtl+dF +n+rg+ndg d++++fL++iY+ I++ ei
  EPX71178.1 647 LIERVVEAFAHYYVEANPGVVASKDAAFVLSYSIIMLNTDQHNPNIkaQARMTLDDFCRNVRGVNDGADFDRQFLSDIYKAIRNFEI 733
                 **********************************************8889*********************************9876 PP

>> Sec7_N  Guanine nucleotide exchange factor in Golgi transport N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.1   0.7   1.1e-23   9.7e-20       6     156 ..     288     479 ..     284     481 .. 0.95
   2 ?   -2.5   0.0      0.46   4.1e+03      80     133 ..     672     701 ..     631     712 .. 0.49

  Alignments for each domain:
  == domain 1  score: 71.1 bits;  conditional E-value: 1.1e-23
      Sec7_N   6 flvfrdLcklinsakskpkflslaersktfsLeLlesvlsnhgdvfrkhpellqllkqklcplLlknlsespsfpvferslrivllLlkkfrseLktEi 104
                  +v+r L+++i+ +k  ++  ++++  k ++L  ++++++ +g+ + + p+l  l+ + lc++Ll+++  ++++pv++ sl ++ +Ll+ + ++Lk + 
  EPX71178.1 288 REVLRVLISFID-SK--NH--HFTHQVKCMALRFINAAFEVAGEHMGNFPSLRILISDTLCKSLLHLI-RNSQTPVLTNSLIVMTTLLQAMPHHLKLQQ 380
                 6899******99.55..34..79*********************************************.99**************************** PP

      Sec7_N 105 evflsllilill...............................................esdsslwqrvlaLeilrrlcsdpqllvelylnYDcdeeak 156
                 e f+s li  l                                                ++ s+ + r+l++e++ +l++ p +lv+ly+nYDcd++++
  EPX71178.1 381 ELFISYLISCLQiptqvpkdsglesslvkaisstnlandhnadratptsfserkrfvldSEGSPPEIRELIVECFGSLSRIPGFLVDLYVNYDCDPQMS 479
                 *********9999**************************************99999995449999*******************************986 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.46
      Sec7_N  80 pvferslrivllLlkkfrseLktEievflsllilillesdsslwqrvlaLeilr 133
                   f++s +i++l   ++  ++k +  + l                         
  EPX71178.1 672 AAFVLSYSIIMLNTDQHNPNIKAQARMTL------------------------D 701
                 23444444444444444444444444444........................3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1478 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       511  (0.0285013); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.85u 0.25s 00:00:01.10 Elapsed: 00:00:00.45
# Mc/sec: 9794.25
//
Query:       EPX71179.1  [L=899]
Description: MCM complex subunit Mcm6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.7e-104  347.8   0.2   2.5e-104  347.3   0.2    1.2  1  MCM              MCM P-loop domain
    3.9e-39  133.4   0.3    8.6e-39  132.3   0.3    1.6  1  MCM_OB           MCM OB domain
    1.4e-26   92.7   1.3    8.1e-26   90.3   1.2    2.4  2  MCM_lid          MCM AAA-lid domain
      3e-25   88.6   0.5    7.4e-25   87.3   0.5    1.7  1  MCM6_C           MCM6 C-terminal winged-helix domain
    2.8e-24   85.7   1.8    2.8e-24   85.7   1.8    2.4  3  MCM_N            MCM N-terminal domain
    4.3e-08   32.8   0.0    5.9e-07   29.1   0.0    2.3  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
    0.00092   19.0   0.0     0.0021   17.8   0.0    1.5  1  Sigma54_activat  Sigma-54 interaction domain
     0.0014   18.5   0.0     0.0035   17.2   0.0    1.6  1  AAA_3            ATPase family associated with various cellul
     0.0055   16.7   0.1      0.023   14.7   0.0    2.1  2  AAA_5            AAA domain (dynein-related subfamily)
  ------ inclusion threshold ------
      0.017   15.5   0.0      0.061   13.7   0.0    1.9  1  Tir_receptor_M   Translocated intimin receptor (Tir) intimin-


Domain annotation for each model (and alignments):
>> MCM  MCM P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  347.3   0.2  1.4e-107  2.5e-104       2     224 .]     418     640 ..     417     640 .. 0.99

  Alignments for each domain:
  == domain 1  score: 347.3 bits;  conditional E-value: 1.4e-107
                 HHHHHHHHTSSTHHHHHHHHSSTTSSS-HHHHHHHHHHHH---EBBBSSSSBBCSS-EEEEEESSTSTHHHHHHHHHHHSSSEEEEESSSSSSSHSSSE CS
         MCM   2 veeikelakekdiieklvksiapsiyghedvkkaillqlfggvkkkledktklrgdinvllvgdpgtaKsqlLkyveklapravytsgkgssaagLtaa 100
                 +++++ + ++++i+++lv+s+aps+yghe +kk+illql+ggv+k+++++++lrgdin+++vgdp+t+Ksq+Lky+++++pravytsgk+ssaagLtaa
  EPX71179.1 418 IDDLRAMVHSDHIYSRLVNSLAPSVYGHEIIKKGILLQLMGGVHKETPEGINLRGDINICIVGDPSTSKSQFLKYICNFLPRAVYTSGKASSAAGLTAA 516
                 57789999******************************************************************************************* PP

                 EEEESSSSSEEEEETHHHHTTTSEEEEESGGGSTCHHHHHHHHHHHHSEEEEESSSCEEEEE--EEEEEEE--SSSSCCTTS-HHHHSSSSHHHHHHSS CS
         MCM 101 vvrdeetgefvleaGalvladkGvcciDefdkmkeedrsalhEamEqqtisiaKaGivatLnartsvlaAanpkagrydkkksvaeninlsaalLsrFD 199
                 vv+deetg+f++eaGal+lad+G+c+iDefdkm+ +d++a+hEamEqqtisiaKaGi+atLnarts+laAanp++gry++k+++ +nin+sa+++srFD
  EPX71179.1 517 VVKDEETGDFTIEAGALMLADNGICAIDEFDKMDLSDQVAIHEAMEQQTISIAKAGIQATLNARTSILAAANPIGGRYNRKTTLRNNINMSAPIMSRFD 615
                 *************************************************************************************************** PP

                 EEEEE-SSTTHHHHHHHHHHHHHHH CS
         MCM 200 lifvllDkvdeekDeelaehivslh 224
                 l+fv+lD+++e+ D++laehiv++h
  EPX71179.1 616 LFFVVLDECNESVDRHLAEHIVNVH 640
                 **********************987 PP

>> MCM_OB  MCM OB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.3   0.3   4.8e-42   8.6e-39       2     125 ..     199     327 ..     198     328 .. 0.96

  Alignments for each domain:
  == domain 1  score: 132.3 bits;  conditional E-value: 4.8e-42
                 XGG--GGGTTSEEEEEEEEEEE---EEEEEEEEEEETTT-.-EE.E....S----SB-..TTT-HHH-EEE-GGGSEEEEEEEEEEE------------ CS
      MCM_OB   2 lRdlrsehigklvkveGivtrasevkpklkkavfeckkcgktve.v....eleePrkCeekeCeskdpfkletekskfvdfqklklQEspeevpaGelP 95 
                 +Rdlr+++ig+l +++G+vtr+sev+p+l + +f c++c+++v  v    +++eP++C+++ C +k++++l++++s+f+d+qk+++QE+++e+p+G++P
  EPX71179.1 199 IRDLRTDRIGRLTTITGTVTRTSEVRPELAHGTFICEECHTVVPhVeqafRYTEPTQCPNELCANKRTWRLNISQSTFQDWQKVRIQENSNEIPTGSMP 297
                 8***************************************98885588888999********************************************* PP

                 -EEEEEEEGGGTT---TT-EEEEEEEEEEE CS
      MCM_OB  96 rslevileddlvdkvkPGdrvevtGiyral 125
                 r+l+vi+++d+v+++k+Gd++ +tG++ a+
  EPX71179.1 298 RTLDVIIRGDIVERAKAGDKCAFTGTLIAV 327
                 *************************99875 PP

>> MCM_lid  MCM AAA-lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.3   1.2   4.5e-29   8.1e-26       1      87 []     654     740 ..     654     740 .. 0.95
   2 ?   -1.6   0.0       2.1   3.7e+03      26      39 ..     822     835 ..     817     845 .. 0.75

  Alignments for each domain:
  == domain 1  score: 90.3 bits;  conditional E-value: 4.5e-29
                 HHHHHHHHHHHHTT--BETCHHHHHHHHHHHHHHHHHTSS.TSSSST--HHHHHHHHHHHHHHHHHHTSSSE-HHHHHHHHHHHHHHH CS
     MCM_lid   1 ellrkYiayarekikPklseeakeklseaYvelRkeeeds.krksipitvRqLesliRLseAlAklrlsevvteedveeairllkesl 87 
                 e+l++Yi+yar ++kPkl++ea+ ++++ Y++lR ++++   ++s++itvRqLes+iRLseA+A+ ++ + +t+  v+ea++ll++s+
  EPX71179.1 654 EQLQRYIRYAR-TFKPKLNNEARAEIVKKYKQLRMDDAQGaGKNSYRITVRQLESMIRLSEAIARANCVDDITPAFVNEAYSLLRQSI 740
                 689********.***********************995446999****************************************9985 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 2.1
                 HHHHHHHHHHHHTS CS
     MCM_lid  26 lseaYvelRkeeed 39 
                 l + Y+elR++e +
  EPX71179.1 822 LIQSYLELREDELH 835
                 7899******9843 PP

>> MCM6_C  MCM6 C-terminal winged-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.3   0.5   4.1e-28   7.4e-25       1     107 [.     785     887 ..     785     888 .. 0.97

  Alignments for each domain:
  == domain 1  score: 87.3 bits;  conditional E-value: 4.1e-28
      MCM6_C   1 kklrityekYveianllvlklreeeeeeeeegiekeeLvewYleqieeeleseeeleeekklvekvlkrLvkdkvLlevreeaeeseeeeeeeeeedvv 99 
                 +kl+ityekYv+++n +v+ l+e+ +e+ +eg+ +++L++ Yle +e+el++ee++ +e  +v+kvl+rLv++++++e++++a+++     +   e++v
  EPX71179.1 785 PKLKITYEKYVSVMNGIVRVLHEHSAEDGTEGMIAGDLIQSYLELREDELHTEEDIIYEAGIVRKVLTRLVHESIVMEIQNKADSE----VKLPFEERV 879
                 599************************999****************************************************9996....8999***** PP

      MCM6_C 100 lvvhPnya 107
                 + +hPn++
  EPX71179.1 880 FSIHPNCD 887
                 *******8 PP

>> MCM_N  MCM N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.7   1.8   1.5e-27   2.8e-24       1     104 []      73     192 ..      73     192 .. 0.89
   2 ?   -4.1   0.0        10   1.8e+04      56      74 ..     232     250 ..     222     269 .. 0.73
   3 ?   -2.8   0.1       5.4   9.8e+03      69      98 ..     672     700 ..     653     708 .. 0.57

  Alignments for each domain:
  == domain 1  score: 85.7 bits;  conditional E-value: 1.5e-27
       MCM_N   1 qekFedFLeefk........ddsededgekkYrdqlqemaerekttLevdlddLaafdeeLaeailenpkeylplleealkevvkklepsykdd..... 86 
                 +e F+dFLe+f+         +s++  +ek+Y++q++ +a +e++t++vd+++L +f++ La a++e+++++ p+l++al+++v+k+ep+y+++     
  EPX71179.1  73 RETFQDFLESFSedrvdemgAPSSSAMSEKYYISQIHGLAMYEIHTVYVDYNHLTTFNDVLALAVVEQYYRFTPFLSRALQQLVEKYEPEYYRNslsqa 171
                 689********866666666444455556***************************************************************9988876 PP

       MCM_N  87 .a..kefpaeltrrfqvrfkn 104
                  a  ++ +   +++f ++f+n
  EPX71179.1 172 nAslSTANRSSDKTFALAFYN 192
                 526899*************98 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 10
       MCM_N  56 ailenpkeylplleealke 74 
                  i e+   ++p  e+a + 
  EPX71179.1 232 FICEECHTVVPHVEQAFRY 250
                 5788888888888888765 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 5.4
       MCM_N  69 eealkevvkklepsykddakefpaeltrrf 98 
                 +ea  e+vkk+++  +dd ++ + +++ r+
  EPX71179.1 672 NEARAEIVKKYKQLRMDD-AQGAGKNSYRI 700
                 345555666666655554.34444444444 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.13   2.3e+02      17      50 ..     468     501 ..     453     523 .. 0.83
   2 !   29.1   0.0   3.3e-10   5.9e-07      93     199 ..     524     620 ..     514     628 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.13
  Mg_chelatase  17 iaaaGgHnlllvGppGsGKtmlakrlpsllppls 50 
                   i   G  n+ +vG p + K+   k + + lp+  
    EPX71179.1 468 INLRGDINICIVGDPSTSKSQFLKYICNFLPRAV 501
                   6678999***********************9865 PP

  == domain 2  score: 29.1 bits;  conditional E-value: 3.3e-10
  Mg_chelatase  93 ggskpkpGeislahnGvLfLDElpefkrkvlevLRePledgevtisrakakvefparfqlvaamNpcpcgklkdkekectcsekeierYlsklsgpl 189
                   g  +++ G++ la nG+  +DE+ +++ +   ++ e +e+++++i++a  +++  ar+ ++aa+Np   g++++         k++ r   ++s+p+
    EPX71179.1 524 GDFTIEAGALMLADNGICAIDEFDKMDLSDQVAIHEAMEQQTISIAKAGIQATLNARTSILAAANPIG-GRYNR---------KTTLRNNINMSAPI 610
                   4557899**********************************************************975.44442.........22334456789999 PP

  Mg_chelatase 190 ldRidlqvev 199
                   + R+dl + v
    EPX71179.1 611 MSRFDLFFVV 620
                   9999998776 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   1.1e-06    0.0021      79     156 ..     523     602 ..     468     609 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 1.1e-06
                      TTTSS-BEHHHHHTTTSEEEEETGGGS-HHHHHHHHHHHHHSEE..ESBTSSSEEE--EEEEEEESS-HHHHHHTTSS-H CS
  Sigma54_activat  79 tGAekekkGlfekadgGtlfLDeigelplelQekLlrvlqegev..ervGsskeikvdvriiaatnedleeaveegkfre 156
                      tG  + ++G++  ad+G+  +De  +++l+ Q+ + ++++++++   + G +++ ++ + i+aa+n    +  +++++r+
       EPX71179.1 523 TGDFTIEAGALMLADNGICAIDEFDKMDLSDQVAIHEAMEQQTIsiAKAGIQATLNARTSILAAANPIGGRYNRKTTLRN 602
                      44444678********************************997522799***************9976666666666665 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0     2e-06    0.0035      40     114 ..     512     591 ..     477     598 .. 0.83

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 2e-06
       AAA_3  40 dilGtevfeekekefefkkGpvf...anllladeinrappktqsalleameerqvtvege..thklpepflvlatqnPie 114
                  ++ + v +e++ +f++++G+++   + +   de ++     q a+ eame+++++++++  + +l+    +la+ nPi 
  EPX71179.1 512 GLTAAVVKDEETGDFTIEAGALMladNGICAIDEFDKMDLSDQVAIHEAMEQQTISIAKAgiQATLNARTSILAAANPIG 591
                 567777889999********998433348888**********************999865226789************95 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   1.3e-05     0.023       1     125 [.     475     595 ..     475     614 .. 0.79
   2 ?   -1.8   0.1       1.6   2.8e+03      66     107 ..     716     754 ..     673     775 .. 0.71

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.3e-05
                 EEEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--...........--------G-SEEEEESGGG--HHHHHHHHHHHHSSEEE.. CS
       AAA_5   1 dvlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreik..ngttslvdsplvraaregeilvlDEveraesevlnsLlslleerrllle 97 
                 ++++vG+p t Ks++ ++++ +l r v +    +  +++ l+  +  +   g+   + ++l+       i+ +DE+++++ + + + +  +e+++++++
  EPX71179.1 475 NICIVGDPSTSKSQFLKYICNFLPRAVYT--SGKASSAAGLTAAVVKDeeTGDFTIEAGALM--LADNGICAIDEFDKMDLSDQVAIHEAMEQQTISIA 569
                 689********************776544..3444566666666664456799999999999..77889****************************99 PP

                 -SSSEEE---......-EEEEEESS--.... CS
       AAA_5  98 eggelvkaknddllerfrviatanpld...r 125
                 + g +   ++      ++++a+anp     +
  EPX71179.1 570 KAGIQATLNAR-----TSILAAANPIGgryN 595
                 99999988886.....899999999884430 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 1.6
                 -SEEEEESGGG--HHHHHHHHHHHHSSEEE..-SSSEEE--- CS
       AAA_5  66 geilvlDEveraesevlnsLlslleerrllleeggelvkakn 107
                 ++  ++D+++   ++ +n+  sll +  +++e  + +v ++ 
  EPX71179.1 716 ARANCVDDIT---PAFVNEAYSLLRQSIIHVERDDIEVEEED 754
                 3344555555...99999999999999999888777776554 PP

>> Tir_receptor_M  Translocated intimin receptor (Tir) intimin-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   3.4e-05     0.061      17      57 ..     272     314 ..     262     319 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 3.4e-05
  Tir_receptor_M  17 tqeafqnPdnqkvniDenGnaiPsGeL..kDDvv..aqiaeqaka 57 
                      q  fq  d qkv i en n iP+G +    Dv+   +i e+aka
      EPX71179.1 272 SQSTFQ--DWQKVRIQENSNEIPTGSMprTLDVIirGDIVERAKA 314
                     677777..57***************98332344422478888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (899 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       771  (0.043003); expected 358.6 (0.02)
Passed bias filter:                      522  (0.0291148); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.73u 0.32s 00:00:01.05 Elapsed: 00:00:00.50
# Mc/sec: 5404.33
//
Query:       EPX71180.1  [L=83]
Description: splicing factor 3B [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      6e-35  119.2   0.0    6.7e-35  119.1   0.0    1.0  1  SF3b10    Splicing factor 3B subunit 10 (SF3b10)


Domain annotation for each model (and alignments):
>> SF3b10  Splicing factor 3B subunit 10 (SF3b10)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.1   0.0   3.7e-39   6.7e-35       1      78 []       3      80 ..       3      80 .. 0.99

  Alignments for each domain:
  == domain 1  score: 119.1 bits;  conditional E-value: 3.7e-39
                XXXXXXXXXXXXXXXXXXXXXXXX--HHHHHHHHHHHHHHHHH-HHHHHHHHHHHT--HHHHHHHHHHCTSSTT---- CS
      SF3b10  1 DklreqqqlehlkskYvGtGhadttkeEWltnihRDtyaSlvgHsalleYfaiaeneskarvrlellekmlqpcgppp 78
                D+lr q++le+l++++vG+Gh+ ttk+EW++n+hRD ++S+vgH++ll+Y+++a +es+ +vr+++lekm+ pcgppp
  EPX71180.1  3 DRLRSQAKLEQLQARFVGVGHSSTTKYEWMVNQHRDALSSIVGHPPLLAYMSTALGESRTQVRQQMLEKMIMPCGPPP 80
                9***************************************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       385  (0.0214736); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 589.51
//
Query:       EPX71181.1  [L=565]
Description: gamma tubulin complex subunit Gfh1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.9e-08   34.3   1.3    3.6e-08   33.4   1.3    1.4  1  GCP_N_terminal  Gamma tubulin complex component N-terminal
    9.7e-08   31.8   0.9    1.7e-07   31.0   0.9    1.5  1  GCP_C_terminal  Gamma tubulin complex component C-terminal


Domain annotation for each model (and alignments):
>> GCP_N_terminal  Gamma tubulin complex component N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.4   1.3     4e-12   3.6e-08       1     174 [.       2     180 ..       2     189 .. 0.84

  Alignments for each domain:
  == domain 1  score: 33.4 bits;  conditional E-value: 4e-12
  GCP_N_terminal   1 lrdllylLqGisgklirfdekddervvkdvrlpgllppslrslverllelgtlyrrlrkfveev...srsesglvlqalaaaldeelteyyrlia 92 
                     l++ll+ L G++++l+ +d+   e ++ +++l++l +p++r+l++++  l+   r+  +  +++    + ++ +  ++l   +++ ++ +++ ++
      EPX71181.1   2 LHELLLFLAGYDSSLFLVDN---EIITLHPSLQTL-HPGERHLLQEIGYLAVERRKTARLFDTSispLDNRNNVFHRSLYMFVEDIIRKFDENLV 92 
                     89**************8666...457888888777.*************************999999777788888******************* PP

  GCP_N_terminal  93 qlEsqlledsesi......ltLlrlevwlqetllllrvLanlveevekanlkggallsllhe.aaqhgdpkvrkllsellervsrpfle 174
                      lE+++l++++s       ++L ++e +l++++ +++ L+ ++  + + ++    + + l   +  ++    ++l+ e+  r  +++l+
      EPX71181.1  93 DLEQKILTRDSSFvgsekfVSLTQVEAHLNPWKYTFPDLLMITTTALQYRT-AYSIFHSLTLlYIRSSRLDFKQLILEVEIRLQKVWLN 180
                     ********99877***************************99998886666.5555555555555666666666666666666666665 PP

>> GCP_C_terminal  Gamma tubulin complex component C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.0   0.9   1.9e-11   1.7e-07      95     232 ..     379     517 ..     276     533 .. 0.82

  Alignments for each domain:
  == domain 1  score: 31.0 bits;  conditional E-value: 1.9e-11
  GCP_C_terminal  95 tLeYkvpwplslvitpealekYqriFrfLlrvkrvefalssl.wkrrkat.garsvllkrarllrqemlhfvsqlqyYvldeviessWreleekl 187
                     +L    +wp ++ i++++ + Y r+++fL  ++     ++s  ++r+++  g+     +  ++ +   l f+s lqyY++d +i +s++ l ekl
      EPX71181.1 379 YLAISLQWPYNMFIDSTIQRDYSRLWSFLGALQVNIIDIKSFsYERKSSVyGNG----RYPWKSLWLTLWFLSCLQYYFYDGIIRPSYKVLREKL 469
                     6677789*************************9999999986443333332333....334555556678************************* PP

  GCP_C_terminal 188 .kkeat...dldelieaHeafLdsilkkclLrskkkllklleeilelil 232
                      +  ++   +++   + H +  + i k +++r+k ++l++l++i++ + 
      EPX71181.1 470 iELGESgnfEMQVYASLHLDAFNYISKMIFIRDK-QFLTILTSIYNEVS 517
                     87665555568888999**************999.********998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (565 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       416  (0.0232026); expected 358.6 (0.02)
Passed bias filter:                      293  (0.0163422); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.28s 00:00:00.85 Elapsed: 00:00:00.45
# Mc/sec: 3733.37
//
Query:       EPX71182.1  [L=185]
Description: ubiquitin conjugating enzyme Ubc8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-36  124.8   0.1    2.4e-36  124.5   0.1    1.1  1  UQ_con    Ubiquitin-conjugating enzyme


Domain annotation for each model (and alignments):
>> UQ_con  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.5   0.1   1.3e-40   2.4e-36       9     139 ..      12     142 ..       5     143 .. 0.94

  Alignments for each domain:
  == domain 1  score: 124.5 bits;  conditional E-value: 1.3e-40
                 HHHSTTTTEEEEEEETTEECEEEEEEEB.TTSTTTTEEEEEEEE--TTTTTS--EEEESST-SCTTBE.TTSBB-CGGGSTTT--TTSHHHHHHH.HHH CS
      UQ_con   9 lakkkpsgisaklvddenlfewkvlikgpedtpYeggvFklelefpedYPlkpPkvkfvtkifHPnvd.ksGevcldiLkeekWspaltlesvll.siq 105
                 ++k  +s ++++lv+d n++e+ v ++gp++tpY++gv+k+++e+p++YP ++P++ fv++ifHPn+d  sG+vcld+++ ++Wsp+ ++ +++   + 
  EPX71182.1  12 VMKLLMSDYEVTLVND-NMQEFYVRFHGPNETPYAEGVWKIHVELPSEYPWRSPSIGFVNRIFHPNIDeLSGSVCLDVIN-QTWSPMFDMINIFEvFLP 108
                 4567788899999997.***************************************************99**********.55***********989** PP

                 HHHHS--TTS-SSHHHHHHHHHTHHHHHHHHHHH CS
      UQ_con 106 sLlaepnpesplnkeaakllkkdreeykkkvkey 139
                 +Ll+ pn ++pln eaa+ll +++++y +kvk+y
  EPX71182.1 109 QLLRYPNASDPLNGEAAALLLREPQTYTAKVKDY 142
                 *******************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       600  (0.0334653); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.28s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 1218.40
//
Query:       EPX71183.1  [L=261]
Description: exosomal 3'-5' exoribonuclease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-31  110.1   0.0    1.4e-31  109.7   0.0    1.2  1  RNase_PH  3' exoribonuclease family, domain 1


Domain annotation for each model (and alignments):
>> RNase_PH  3' exoribonuclease family, domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.7   0.0     8e-36   1.4e-31       2     132 .]      35     163 ..      34     163 .. 0.93

  Alignments for each domain:
  == domain 1  score: 109.7 bits;  conditional E-value: 8e-36
                 EEEEEEEESSSSTTSEEEEEEECCEEEEEEEEEEEEEE-TCCG--CCEEEECCCCECCCCEC-C...S...HHHHHHHHHHHHHHCCTC-CCGCCTCEE CS
    RNase_PH   2 lRslsietgvlsqanGSaylelGdtkvlasvtgpieerpseerddaegaldveveyapfasgerrregrpsdeeielsrlleralrpsillekkpksti 100
                 +R++ ++ g +++a GSay+e+G+ k+ ++v+gp++ + + +++    +l++ev+++pf+  er +++++s+ee++   lle+al+psill+ +pks i
  EPX71183.1  35 CRKIYLKLGWATKAMGSAYYESGKIKIGCGVYGPRPNKTFSFQNI--AKLNCEVKFSPFSMLER-KGHVQSAEEKDYGFLLETALSPSILLHLYPKSSI 130
                 7**********************************9843333244..56***************.679******************************* PP

                 EEEEEEEECCC.S-CHHHCHHHHHHHHHCTCEE CS
    RNase_PH 101 diditvlssdg.gslldalinaaslALadagip 132
                 d+++++l+sdg + +l+a+i++as+A+ada i+
  EPX71183.1 131 DVYVQILESDGtMATLAAAITCASAAIADANIE 163
                 ***********999****************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       518  (0.0288917); expected 358.6 (0.02)
Passed bias filter:                      497  (0.0277205); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 1762.51
//
Query:       EPX71184.1  [L=1013]
Description: ubiquitin activating enzyme E1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.2e-98  328.0   0.0    1.6e-69  234.0   0.0    2.1  2  ThiF             ThiF family
    1.5e-93  313.4   0.7    2.5e-93  312.6   0.7    1.4  1  UBA_e1_thiolCys  Ubiquitin-activating enzyme active site
    4.5e-32  110.6   0.0    9.4e-32  109.6   0.0    1.6  1  E1_UFD           Ubiquitin fold domain
    3.2e-24   84.9   0.1      9e-24   83.5   0.1    1.9  1  E1_FCCH          Ubiquitin-activating enzyme E1 FCCH domain
    1.2e-22   79.9   0.2    3.1e-22   78.5   0.2    1.8  1  E1_4HB           Ubiquitin-activating enzyme E1 four-helix bu
  ------ inclusion threshold ------
        0.1   12.7   0.0        1.6    8.8   0.0    2.4  2  Shikimate_DH     Shikimate / quinate 5-dehydrogenase


Domain annotation for each model (and alignments):
>> ThiF  ThiF family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.0   0.0   1.2e-29   3.7e-26       1     236 [.      20     401 ..      20     407 .. 0.94
   2 !  234.0   0.0   5.2e-73   1.6e-69       1     240 [.     411     907 ..     411     914 .. 0.98

  Alignments for each domain:
  == domain 1  score: 92.0 bits;  conditional E-value: 1.2e-29
                 THHHHHHHHHHHHHHHHTSEEEEE--SHHHHHHHHHHHHHTTTEEEEEESSB--GGGGGTBTTS-GGGTTSBHHHHHHHHHHHT-TTSEEEEEES-CCG CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        ThiF   1 ysrqlallgedgqekLrdskvllvGaGglGsellknLalsGvgkltlvDnDkielsNlnRqflfreediGkpKaevaaealqeinpdveveavteritd 99 
                 ysrql++lg++ ++++++s vl++G+ glG e++kn  l+Gv+++tl D     +++l+ q+  +e+d G ++aev   +l+e+n +v v+  ++   +
  EPX71184.1  20 YSRQLYVLGHEAMKQMSQSDVLIIGCKGLGVEIAKNVCLAGVKSVTLYDPQPTHIEDLSSQYFLTEDDLGVARAEVSVPKLAELNQYVPVSSTPQLSIQ 118
                 89****************************************************************************************998876644 PP

                 CCS-HHHHTT-SEEEEESSSHHHHHHHHHHHHHHT-EEEEEEEETTEEEEEEEEECCS-ECTSS-TGGS.EECCCCEEHHH.................. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.................. RF
        ThiF 100 etvleellesvDlVvdalDniearrlvnracvkkgiplieagtlgfegqvvviipgktgcyeCldpsstedptekkvplct.................. 180
                 +      l+++ +Vv +  +++ ++ +n++ +++gi +i+a+  g+ g v++ +    + + C+d+ + + p   ++ ++t                  
  EPX71184.1 119 D------LKKYKCVVVTETSLSKQLEINDFTHENGIAFISADSRGLFGSVFCDF---GPEFICTDV-DGNEPLTGMIANITddgtvtmleetrhgledg 207
                 3......89********************************************8...788888886.55666666777777888888888999****** PP

                 ................................................................................................... CS
                 ................................................................................................... RF
        ThiF 181 ................................................................................................... 180
                                                                                                                    
  EPX71184.1 208 dyvkfaevkgvpalnngqphkvevkgpytfsigsidvlggsaatggiftqvkmpqklafkslreslkepdyvfpdfgkmlrppqyhvafqalsafadth 306
                 *************************************************************************************************** PP

                 ...........................................HHHCTE-B-HHHHHHHHHHHHHHHHHHHTTBCGGGCCEEEECCTTTTEEEEECCEE CS
                 ...........................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        ThiF 181 ...........................................siagnipaiatttavvaglaalellkllsgkeklenslltqvdllesrfenveler 236
                                                            ++ g    + +++a+++g++a+e+lk+  +k    ++++ ++d les  ++vel +
  EPX71184.1 307 ngalprprndadageflqlakkigtsfdsqleldekllkevsyQAKG---DLVSMCAFLGGIVAQEVLKSTTSKFFPFKQFF-YFDSLESLPTSVELSE 401
                 ***********************************999999887777...9********************99999999999.9999999999999854 PP

  == domain 2  score: 234.0 bits;  conditional E-value: 5.2e-73
                 THHHHHHHHHHHHHHHHTSEEEEE--SHHHHHHHHHHHHHTTT.....EEEEEESSB--GGGGGTBTTS-GGGTTSBHHHHHHHHHHHT-TTS..EEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxx RF
        ThiF   1 ysrqlallgedgqekLrdskvllvGaGglGsellknLalsGvg.....kltlvDnDkielsNlnRqflfreediGkpKaevaaealqeinpdv..evea 92 
                 y+ q+a++g ++q++L++   +lvGaG++G+e+lkn+ ++Gv      +++++D+D ie+sNlnRqflfr+ d+Gk Kae+aa+a++ +np++  +++ 
  EPX71184.1 411 YDGQIAVFGAEFQQRLSSLNQFLVGAGAIGCEMLKNWSMMGVAtgehgHIHVTDMDSIEKSNLNRQFLFRPRDVGKLKAESAANAVAIMNPSLtgKITS 509
                 789***************************************9999***************************************************** PP

                 EES-CCGCC...S-HHHHTT-SEEEEESSSHHHHHHHHHHHHHHT-EEEEEEEETTEEEEEEEEECCS-ECTSS-TGGS.EECCCCEEHHH........ CS
                 xxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........ RF
        ThiF  93 vteritdet...vleellesvDlVvdalDniearrlvnracvkkgiplieagtlgfegqvvviipgktgcyeCldpsstedptekkvplct........ 180
                 ++er+++e+   + +e++ ++ +V +alDn+ear++v+r+cv+ ++pl+e+gtlg++g+++v++p+ t+ y      s++dp+ek++p+ct        
  EPX71184.1 510 YQERVGPESegiFGDEFFGNLSMVTNALDNVEARLYVDRRCVFFEKPLLESGTLGTKGNTQVVVPHLTESYG-----SSQDPPEKSFPICTlknfpnri 603
                 *******666999**************************************************976666655.....558******************* PP

                 ................................................................................................... CS
                 ................................................................................................... RF
        ThiF 181 ................................................................................................... 180
                                                                                                                    
  EPX71184.1 604 ehtiawardlfeglfkqpvdnvnlylsspnflettlktssnprevlenirdylvtdkplsfeeciiwarnqfekffnhniqqllfnfpkdsvtsngqpf 702
                 *************************************************************************************************** PP

                 ................................................................................................... CS
                 ................................................................................................... RF
        ThiF 181 ................................................................................................... 180
                                                                                                                    
  EPX71184.1 703 wsgpkrapspltfdinnrahfdfivaaasiyafnyglkeetdpalyervlssfkpaeytpksgvkiqvndsdeapeaaansdkqelksiadslpppssl 801
                 *************************************************************************************************** PP

                 .............................................HHHCT.E-B-HHHHHHHHHHHHHHHHHHHTTBCGGGCCEEEECCTTTTEEEEEC CS
                 .............................................xxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        ThiF 181 .............................................siagn.ipaiatttavvaglaalellkllsgkeklenslltqvdllesrfenve 233
                                                              ++ag+ +pa+ t+tavv+gl++lel+kl++gk+kle++++ +++l+   f++  
  EPX71184.1 802 agfrltpadfekdddtnhhidfitaasnlralnyeittadrfktkFVAGKiVPAMCTSTAVVSGLVCLELVKLVDGKKKLEDYKNGFFNLAIGLFTFSD 900
                 ***********************************************************************************************9999 PP

                 CEEEEEE CS
                 xxxxxxx RF
        ThiF 234 lerakks 240
                 +  ++k+
  EPX71184.1 901 PIGSPKM 907
                 9888876 PP

>> UBA_e1_thiolCys  Ubiquitin-activating enzyme active site
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  312.6   0.7   8.4e-97   2.5e-93       1     252 []     600     846 ..     600     846 .. 0.97

  Alignments for each domain:
  == domain 1  score: 312.6 bits;  conditional E-value: 8.4e-97
  UBA_e1_thiolCys   1 PneieHtieWArdkFeglFekkpeevnkflkdkekfleelekekeeekletlekvlkllvkerpktfedCvkwArekfeklFnnkikqLlynfP 94 
                      Pn+ieHti+WArd FeglF++++++vn +l++  +fle++ k++++ + e+le+++++lv+++p +fe+C+ wAr++fek Fn++i+qLl nfP
       EPX71184.1 600 PNRIEHTIAWARDLFEGLFKQPVDNVNLYLSS-PNFLETTLKTSSNPR-EVLENIRDYLVTDKPLSFEECIIWARNQFEKFFNHNIQQLLFNFP 691
                      9*****************************65.799999999888877.9******************************************** PP

  UBA_e1_thiolCys  95 kdsktsdGapFWsgpKraPkplefdlenelhleFvvaaanLraqvygikgerdeeaiakllskvkvpefkpkekvkiavsdeeakeeeeeeede 188
                      kds+ts+G+pFWsgpKraP+pl+fd++n+ h++F+vaaa ++a++yg+k+e+d + ++++ls++k  e++pk++vki+v+d++++ e+++++d+
       EPX71184.1 692 KDSVTSNGQPFWSGPKRAPSPLTFDINNRAHFDFIVAAASIYAFNYGLKEETDPALYERVLSSFKPAEYTPKSGVKIQVNDSDEAPEAAANSDK 785
                      ******************************************************************************999999888878999* PP

  UBA_e1_thiolCys 189 eeleelaeeleklakkessla.lklkpieFeKDddtnfhidfitaasNlRArnYkIkeadrlkvK 252
                      +el+++a++l+     +ssla ++l+p++FeKDddtn+hidfitaasNlRA nY+I++adr+k+K
       EPX71184.1 786 QELKSIADSLPP----PSSLAgFRLTPADFEKDDDTNHHIDFITAASNLRALNYEITTADRFKTK 846
                      ************....899999******************************************9 PP

>> E1_UFD  Ubiquitin fold domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.6   0.0   3.2e-35   9.4e-32       1      93 []     918    1009 ..     918    1009 .. 0.99

  Alignments for each domain:
  == domain 1  score: 109.6 bits;  conditional E-value: 3.2e-35
      E1_UFD    1 WDrlevegeitlkelldyfkekkklevsmislgvsllYasflpkkkdkerlklklselveevtkkkipphqkyldlevsvedeegedvevPlv 93  
                  WDr++++ + tl++l+d+f+ek +lev+m+s+gvsllYa+f p+kk +erl+lk+s+lve+++kkk++p +k+l+lev+++d++gedvevP++
  EPX71184.1  918 WDRFTLP-NFTLQNLIDHFSEKEGLEVTMLSSGVSLLYANFQPPKKLAERLPLKISDLVEQISKKKLEPFRKHLILEVCCDDKDGEDVEVPFI 1009
                  *******.***********************************************************************************97 PP

>> E1_FCCH  Ubiquitin-activating enzyme E1 FCCH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.5   0.1     3e-27     9e-24       2      71 .]     190     260 ..     189     260 .. 0.92

  Alignments for each domain:
  == domain 1  score: 83.5 bits;  conditional E-value: 3e-27
                 TTSEEEESTT--S---TT-EEEEES-BT-CCGGGS--EE-EE-SSSEEE----TTS.-SEEES-EEEEE-- CS
     E1_FCCH   2 npgvVtvleesrhgledgDyVtFseveGmtelNgkeprkikvlgpytFeIgdtsnf.spYkrgGivtqvKq 71 
                 ++g+Vt+lee+rhgledgDyV+F+ev+G++ lN+++p+k++v+gpytF+Ig ++ + +   +gGi+tqvK+
  EPX71184.1 190 DDGTVTMLEETRHGLEDGDYVKFAEVKGVPALNNGQPHKVEVKGPYTFSIGSIDVLgGSAATGGIFTQVKM 260
                 579************************************************87555156679********8 PP

>> E1_4HB  Ubiquitin-activating enzyme E1 four-helix bundle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.5   0.2     1e-25   3.1e-22       1      69 [.     261     329 ..     261     330 .. 0.98

  Alignments for each domain:
  == domain 1  score: 78.5 bits;  conditional E-value: 1e-25
                 -EEE----HHHHTTS-.-BE-S-GGGTTCHHHHHHHHHHHHHHHHCT.T----TT-HHHHHHHHHHHHHH CS
      E1_4HB   1 PktlsFksleesleePeeflisDfakfdrpeqlHlafqALhaFeeeh.grlPrplneedaekvvalakel 69 
                 P++l Fksl+esl+eP ++++ Df+k+ rp q H+afqAL+aF+++h g lPrp+n++da ++++lak++
  EPX71184.1 261 PQKLAFKSLRESLKEP-DYVFPDFGKMLRPPQYHVAFQALSAFADTHnGALPRPRNDADAGEFLQLAKKI 329
                 9***************.******************************999******************87 PP

>> Shikimate_DH  Shikimate / quinate 5-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.0   0.00053       1.6       4      56 ..      29      81 ..      26     106 .. 0.90
   2 ?    0.9   0.0      0.15   4.4e+02       8      32 ..     424     448 ..     419     454 .. 0.79

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00053
                  HHHHS..TT-EEEEES-SHHHHHHHHHHHCCT-CEEEEEESSHHHHHHHHHHH CS
  Shikimate_DH  4 kkkleslkekkvlliGaGemaelvakhLlakgvkkvvvaNRtlerakelaeel 56
                  ++ +++++++ vl+iG   ++ ++ak+ + +gvk+v+    + ++ ++l +++
    EPX71184.1 29 HEAMKQMSQSDVLIIGCKGLGVEIAKNVCLAGVKSVTLYDPQPTHIEDLSSQY 81
                  6678899*******************************999999999998886 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.15
                   S..TT-EEEEES-SHHHHHHHHHHH CS
  Shikimate_DH   8 eslkekkvlliGaGemaelvakhLl 32 
                   ++l++ +  l+GaG ++ +++k+ +
    EPX71184.1 424 QRLSSLNQFLVGAGAIGCEMLKNWS 448
                   378888999*********9998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1013 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       456  (0.0254337); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.76u 0.27s 00:00:01.03 Elapsed: 00:00:00.48
# Mc/sec: 6324.53
//
Query:       EPX71185.1  [L=79]
Description: Pet117 cytochrome c oxidase assembly protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.3e-16   59.3   0.3    3.7e-16   59.1   0.3    1.0  1  PET117          PET assembly of cytochrome c oxidase, mitocho
  ------ inclusion threshold ------
       0.07   13.4   0.1      0.092   13.0   0.1    1.2  1  Chordopox_A13L  Chordopoxvirus A13L protein
      0.092   12.8   0.0       0.13   12.3   0.0    1.2  1  DUF4500         Domain of unknown function (DUF4500)


Domain annotation for each model (and alignments):
>> PET117  PET assembly of cytochrome c oxidase, mitochondrial
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.1   0.3   6.2e-20   3.7e-16       1      70 []       4      69 ..       4      69 .. 0.98

  Alignments for each domain:
  == domain 1  score: 59.1 bits;  conditional E-value: 6.2e-20
      PET117  1 AsKitLglsvlltaatvvgVHylQrlerealrqGvirDaerqaeKerkrkenkaeleeqkelrkkyekvQ 70
                AsK ++ +++++++ +v++VH +Q +e++++ +Gv +D+er + K    + +  +l++q++l + yek Q
  EPX71185.1  4 ASKTCILGASAFSIFMVYFVHSNQIAEKQRMSAGVEKDQERKQIK----QSRFDDLNKQRALYDFYEKDQ 69
                8********************************************....79****************988 PP

>> Chordopox_A13L  Chordopoxvirus A13L protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   1.5e-05     0.092      17      66 ..      18      65 ..       9      70 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.5e-05
  Chordopox_A13L 17 livYgiYnrkketqttnpstveeyeeedniKtgfvdkLksdhlkslykLf 66
                    ++vY +   + +++++    ve+ +e+++iK +  d L+++  ++ly ++
      EPX71185.1 18 FMVYFVHSNQIAEKQRMSAGVEKDQERKQIKQSRFDDLNKQ--RALYDFY 65
                    67898988888888888888******************997..4666554 PP

>> DUF4500  Domain of unknown function (DUF4500)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   2.2e-05      0.13      37      76 ..       9      48 ..       3      52 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 2.2e-05
     DUF4500 37 alGlvaltlcvgYlaYlrakkenkklyeavksdgeeelrk 76
                +lG  a+++ + Y++  ++ +e++++   v++d+e++  k
  EPX71185.1  9 ILGASAFSIFMVYFVHSNQIAEKQRMSAGVEKDQERKQIK 48
                79******************************99976544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1172  (0.065369); expected 358.6 (0.02)
Passed bias filter:                      480  (0.0267723); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 569.47
//
Query:       EPX71186.1  [L=640]
Description: kinesin-like protein Tea2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.9e-99  331.2   5.4    5.9e-99  331.2   5.4    2.1  2  Kinesin         Kinesin motor domain
    1.1e-21   77.3   0.1    2.7e-21   76.1   0.1    1.6  1  Microtub_bd     Microtubule binding
     0.0024   16.8   9.4     0.0074   15.2   9.3    1.8  2  Spc7            Spc7 kinetochore protein
  ------ inclusion threshold ------
      0.014   14.3  10.4      0.019   13.9  10.4    1.1  1  DUF812          Protein of unknown function (DUF812)
      0.078   13.4   6.8       0.19   12.2   6.8    1.6  1  Fez1            Fez1
       0.18   12.1   1.6        1.3    9.4   0.0    2.7  3  AAA_16          AAA ATPase domain
       0.19   11.2  12.4       0.35   10.3  10.3    1.9  1  HMMR_N          Hyaluronan mediated motility receptor N-termi
       0.25   11.5   4.8       0.75   10.0   4.8    1.9  1  Fib_alpha       Fibrinogen alpha/beta chain family
       0.31   11.4   2.6       0.81   10.0   2.6    1.7  1  SbcD_C          Type 5 capsule protein repressor C-terminal d
       0.75    9.9  10.6        0.1   12.7   1.8    2.3  2  UPF0242         Uncharacterised protein family (UPF0242) N-te
          2    9.1  11.5        3.3    8.4   2.1    2.7  2  HIP1_clath_bdg  Clathrin-binding domain of Huntingtin-interac
        9.5    6.2   6.9         15    5.6   1.1    3.5  3  PKcGMP_CC       Coiled-coil N-terminus of cGMP-dependent prot


Domain annotation for each model (and alignments):
>> Kinesin  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  331.2   5.4  3.9e-102   5.9e-99       1     332 [.     139     461 ..     139     462 .. 0.95
   2 ?    1.2   0.3     0.093   1.4e+02     151     196 ..     529     573 ..     485     579 .. 0.81

  Alignments for each domain:
  == domain 1  score: 331.2 bits;  conditional E-value: 3.9e-102
                 EE-SSSHHHHTTTTEBCEEEECTCTCEEEEEEEEECTTSCEEEEESEEEETTS-HHHHHHHHHHHHHHHHHTTSEEEEEEEESTTSSHHHHHTBCTTTS CS
     Kinesin   1 RvRplnekekeeeeeeeveveeekkeeekkskkenkeeeekkfkFdkvfdeeatqeevyeetakplvesvleGynatifaYGqtgsGKTyTmegkeeee 99 
                 R+Rp+++++++  ++  v  +  ++e  ++++++n+++ ++++ F++vf+ e+++ ++y++ ++++v++v++Gyn+ +faYG+tg+GKTy+m+g+ +ee
  EPX71186.1 139 RIRPVETQNNNLWSHGTVLNDPYEREYIHQDTSSNSSSLQQEYMFNHVFGVESDNLSIYRKSVASVVRNVFSGYNGIVFAYGMTGTGKTYSMQGT-DEE 236
                 99*****99999999999888788888888999999999*******************************************************9.999 PP

                 BSHHHHHHHHHHHHHHHCTTTHEEEEEEEEEEEEEETTEEEETTSTTTTSTSSEBEEEECTTSCCEEETTS--EEESSHHHHHHHHHHHHHHHTSTTSS CS
     Kinesin 100 eGiipraleelFesikkekeekekefsvkvsylEiYneeiyDLLeskkskkkkklkiredskkgevyvkgltevevksaeevlellekgeknrkvaetk 198
                 +Giip  +++lF++++++ ++  ++f++++sylEiYne+i+DL+++++    ++ k+re ++ gev+v+ +t v v+s eev +++e++++ rk+a+t+
  EPX71186.1 237 PGIIPLGMRDLFNMVESNADS--DTFQIRISYLEIYNERIRDLISDSH----EEPKVREGAN-GEVIVSPMTRVLVTSPEEVSQVIEQCNAIRKTAATD 328
                 ***************998887..89********************993....34589**999.66********************************** PP

                 CTSHHCCSEEEEEEEEEEEETTTTTCEEEEEEEEEEEEEEECCCHHHHSSTCHHHHHHHHHHHHHHHHHHHHHHHHHHT......CCTSTSCGGGSHHH CS
     Kinesin 199 lneeSSRSHavftitleqknlkeeteekvkisklnLvDLAGsErasktgaaegerlkEaaniNkSLlaLgrvisaLaek......kkskhipYRdSkLT 291
                 +n+ SSRSHa++++ l +++++++t+   ++s+l+LvDLAGsEras+++    er+kE+a iNkSLl+Lg+vis L+++      ++++hipYR+SkLT
  EPX71186.1 329 YNTYSSRSHAILQVFLIRNSESTHTT---RTSTLSLVDLAGSERASTDH----ERRKEGAFINKSLLTLGTVISRLSTSlnggasSNNSHIPYRESKLT 420
                 *****************999776555...9**************88777....479*****************************9************* PP

                 HHTGGGHSSSSEEEEEEEE-TBGGGHHHHHHHHHHHHHHCT CS
     Kinesin 292 rlLqdsLgGnsktlmivtvspssenleetlstlkfaerake 332
                 rlLq+sL+G+s++ +++t+s + +++ et++tlkfa r+++
  EPX71186.1 421 RLLQQSLSGQSQISLLATISIEPRHAVETTNTLKFAMRTQN 461
                 **************************************997 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.093
                 SSEBEEEECTTSCCEEETTS--EEESSHHHHHHHHHHHHHHHTSTT CS
     Kinesin 151 kkklkiredskkgevyvkgltevevksaeevlellekgeknrkvae 196
                 + +l++ e  + +++ +++l+e e+++ e+++  l++++++r+ ae
  EPX71186.1 529 RARLRMEELLSDRNMEIADLKE-ELSDKEKIIYALRSSQQRRELAE 573
                 44677778777788999*9987.57899999**********99987 PP

>> Microtub_bd  Microtubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.1   0.1   1.8e-24   2.7e-21      37     149 .]     166     278 ..     136     278 .. 0.83

  Alignments for each domain:
  == domain 1  score: 76.1 bits;  conditional E-value: 1.8e-24
                  EEEETTT...TTTEEEE-SEEEECTTHCCCCC.CCCHHHHHHHHTT--EEEEEEES................ST-HCHHHHHHHHHHCCTSCCCCEEE CS
  Microtub_bd  37 akikfpeeekkkkkefsFdrvfeseseqeevf.eeisqlvqsaldgynvcifaygqTGsGKtyTmegeeeeagmipraveeifetiselkekgwkyei 133
                  ++ +++++ ++ ++e+ F++vf  es + +++ + ++ +v  +++gyn  +fayg TG GKty m+g++ee+g ip  ++ +f++++++   + +++i
   EPX71186.1 166 IHQDTSSNSSSLQQEYMFNHVFGVESDNLSIYrKSVASVVRNVFSGYNGIVFAYGMTGTGKTYSMQGTDEEPGIIPLGMRDLFNMVESN-ADSDTFQI 262
                  3333444888999*************999987256788999999*********************************************.689***** PP

                  EEEEEEEESS-EEETT CS
  Microtub_bd 134 elqfveiynekvqDlL 149
                  +++++eiyne+++Dl+
   EPX71186.1 263 RISYLEIYNERIRDLI 278
                  **************96 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.95   1.4e+03      52      87 ..     259     294 ..     251     299 .. 0.81
   2 !   15.2   9.3   4.9e-06    0.0074     189     281 ..     467     558 ..     440     575 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.95
        Spc7  52 AaactvPlLeLYqhscreLkkyisegrkiireieee 87 
                 ++ +++  Le+Y+  +r+L ++ +e  k+ + ++ e
  EPX71186.1 259 TFQIRISYLEIYNERIRDLISDSHEEPKVREGANGE 294
                 67889999***********99988887776666655 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 4.9e-06
        Spc7 189 aaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeaervleeckgwsesevsrlkeevkaleel 281
                 +++e ++  ++e+ +lr +la+ ++e+e   + +++l+++lee ++ i+ l+++ks +e++i++a+  +ee  + ++ e+  lkee+++ e++
  EPX71186.1 467 RQAEASTNYQAEVSSLRAALAKSNQELELCTNVIKQLKSDLEERDAYISWLEAEKS-HESAISRARLRMEELLSDRNMEIADLKEELSDKEKI 558
                 2333334449*****************************************88876.699**************************9987765 PP

>> DUF812  Protein of unknown function (DUF812)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9  10.4   1.3e-05     0.019     195     415 ..     344     562 ..     268     575 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.3e-05
      DUF812 195 vtaqlssraslvpslleenaaelaaeqeweeeaneqgl..asr.lteeeykkrkkeklqkrlaeqlrkaalkseeaessasksksdlaellsefsekse 290
                 + ++ +s++++ +s+l+      +++ + ++e  ++g   +++ lt   + +r +++l+  ++++ ++   ++++ +       + l+++ls  s+ s 
  EPX71186.1 344 LIRNSESTHTTRTSTLSLVDLAGSERASTDHERRKEGAfiNKSlLTLGTVISRLSTSLNGGASSNNSHIPYRESKLT-------RLLQQSLSGQSQISL 435
                 33666666666667777666666666666666666665554444555555555566666665555555555555544.......444444444433333 PP

      DUF812 291 tdslk.tkgsrfthaeklqf..tkeelakkaeteeelkkkreeeleelqeqieeleskieeleeeikklessikqveeeleeekeeneelekevklkkk 386
                   +   + +  ++ +++l+f   +++l+ ++  + e+ ++ ++e+++l+  + + ++++e  ++ ik+l+s++++ +  +  +++e++ + +  + + +
  EPX71186.1 436 LATISiEPRHAVETTNTLKFamRTQNLP-TEIRQAEASTNYQAEVSSLRAALAKSNQELELCTNVIKQLKSDLEERDAYISWLEAEKSHESAISRARLR 533
                 2222202234445555555522333355.778888999999********************************************************** PP

      DUF812 387 tlellpdaeeniekLqalveasaqrlvel 415
                 + ell d +  i+ L++++ ++++ +  l
  EPX71186.1 534 MEELLSDRNMEIADLKEELSDKEKIIYAL 562
                 ******************99998877766 PP

>> Fez1  Fez1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   6.8   0.00012      0.19      23     132 ..     468     576 ..     463     622 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00012
        Fez1  23 qaevtqk.lseivalkaqlrelrakleekeeeikeleesleektlelevcenelqrk...kseaellrekvekleeelkelreelselsleeeeaales 117
                 qae ++    e+ +l+a l   +++le   + ik+l++ lee+++ +  +e+e +++   +     ++e ++  + e+++l+eels+++    + +++ 
  EPX71186.1 468 QAEASTNyQAEVSSLRAALAKSNQELELCTNVIKQLKSDLEERDAYISWLEAEKSHEsaiSRARLRMEELLSDRNMEIADLKEELSDKE----KIIYAL 562
                 6666554167999**************************************99998854333333456777889999******999944....333333 PP

        Fez1 118 deakaqrqeaeelee 132
                 ++  +qr+e  el++
  EPX71186.1 563 RS-SQQRRELAELNQ 576
                 33.333434333333 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.0   0.00088       1.3      11      45 ..     200     234 ..     197     354 .. 0.72
   2 ?   -0.6   0.1         1   1.5e+03      47      88 ..     396     434 ..     385     506 .. 0.45
   3 ?   -0.1   0.3      0.69     1e+03      39     122 ..     498     573 ..     495     587 .. 0.65

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00088
      AAA_16  11 qLlsalervrsgrpelvllsGesGvGKsslvrell 45 
                  ++s++++v sg  ++v+ +G+ G+GK+  ++   
  EPX71186.1 200 SVASVVRNVFSGYNGIVFAYGMTGTGKTYSMQGTD 234
                 5789999*********************8876655 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 1
      AAA_16  47 alekdggiflrgkcdqlesaipy..salaqalareellrqllde 88 
                 +l+++    l+g + ++ s ipy  s l+++l + +l  q    
  EPX71186.1 396 RLSTS----LNGGASSNNSHIPYreSKLTRLLQQ-SLSGQSQIS 434
                 55556....6777777777777754334444422.333332222 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.69
      AAA_16  39 slvrellralekdggiflrgkcdqlesaipysalaqalareellrqlldeaesaeleawrekleealaavpelagaeasrllel 122
                  ++++l+  le+++++  + +++++++        +a++r +l  ++l  +++ e ++ +e+l +  +++ +l++++ +r l++
  EPX71186.1 498 NVIKQLKSDLEERDAYISWLEAEKSHE--------SAISRARLRMEELLSDRNMEIADLKEELSDKEKIIYALRSSQQRRELAE 573
                 578888889999988887777777722........3444444444444455777888888888887777777777766443333 PP

>> HMMR_N  Hyaluronan mediated motility receptor N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3  10.3   0.00024      0.35     194     326 ..     423     557 ..     415     566 .. 0.62

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00024
      HMMR_N 194 tqknLeeskakvaqLkeklvslekekieekseteklleyieelsnvseqle...kykldiaqleellkekndeiesLkssLeekeqelskqvkdlnekc 289
                 +q+ L + +++++ L     s+e  ++ e ++t k    +++l  +++q+e    y+ ++ +l+  l++ n+e+e   + +++    l+   +++++ +
  EPX71186.1 423 LQQSL-SGQSQISLLA--TISIEPRHAVETTNTLKFAMRTQNLPTEIRQAEastNYQAEVSSLRAALAKSNQELELCTNVIKQ----LKSDLEERDAYI 514
                 45555.5666666666..45677777777777777777777766666666433368888888888888888888866665554....444677777777 PP

      HMMR_N 290 klle..kekeelvreeeekeq....tlsaEleelkeklklkeq 326
                 + le  k+ e  +++++ + +     ++ E+ +lke+l  ke+
  EPX71186.1 515 SWLEaeKSHESAISRARLRMEellsDRNMEIADLKEELSDKEK 557
                 7777223345556666555441111457788888888877765 PP

>> Fib_alpha  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   4.8    0.0005      0.75      29     124 ..     471     565 ..     461     572 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.0005
                 CCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH CS
   Fib_alpha  29 yekdvkkdlekleneleeisnstkeaeelvkeikdslrekqkskkdndnvikksskeleeeilrlketidaqesnirvLqnvlesneqkiqkLeqd 124
                   ++++ ++++l+  l++ +++ +   +++k++k+ l+e+ +  +   ++ k+ ++ + +  lr++e +++   +i  L++ l+++e+ i  L++ 
  EPX71186.1 471 ASTNYQAEVSSLRAALAKSNQELELCTNVIKQLKSDLEERDAYIS-WLEAEKSHESAISRARLRMEELLSDRNMEIADLKEELSDKEKIIYALRSS 565
                 56789999**********************************999.57788888999999****************************99999875 PP

>> SbcD_C  Type 5 capsule protein repressor C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   2.6   0.00054      0.81      14      82 ..     502     575 ..     467     579 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00054
      SbcD_C  14 eilal.eepsekpawlevevtdedplpdlrerlrellegipvevlrlrrtr..eka...saeleqeaeetlaels 82 
                 ++++  ee +    wle e   e  ++ +r r++ell ++++e+  l+++   + +    a  + +++++lael+
  EPX71186.1 502 QLKSDlEERDAYISWLEAEKSHESAISRARLRMEELLSDRNMEIADLKEELsdK-EkiiYALRSSQQRRELAELN 575
                 333344455555789********************************6655652.24566777777777888876 PP

>> UPF0242  Uncharacterised protein family (UPF0242) N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   1.8   6.8e-05       0.1     117     177 ..     457     519 ..     395     523 .. 0.79
   2 ?    1.3   2.3      0.21   3.1e+02      88     120 ..     535     567 ..     520     589 .. 0.64

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 6.8e-05
     UPF0242 117 eenqqL..qekleaiaedfeelkleleeqLaekqellqeyqetieeqrsvlekrqdqieqLes 177
                  + q+L  +++  +++ ++++    l ++La+ ++ l+   + i++++s le+r+++i+ Le+
  EPX71186.1 457 MRTQNLptEIRQAEASTNYQAEVSSLRAALAKSNQELELCTNVIKQLKSDLEERDAYISWLEA 519
                 44444411445555677999999**************************************97 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.21
     UPF0242  88 eealeelqeeeeeLkeeldakeeelerlkeenq 120
                 ee l +++ e  +Lkeel+ ke+ +  l+  +q
  EPX71186.1 535 EELLSDRNMEIADLKEELSDKEKIIYALRSSQQ 567
                 455666666677777777777666665555544 PP

>> HIP1_clath_bdg  Clathrin-binding domain of Huntingtin-interacting protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   2.1    0.0022       3.3      43      97 ..     469     522 ..     444     523 .. 0.80
   2 ?    4.4   3.4     0.038        57      33      82 ..     524     573 ..     519     579 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0022
  HIP1_clath_bdg  43 aerkleeqkeelekLkreleakraelarlkssLesseqsgeqlssqlaaLqaEke 97 
                     ae  + + + e+ +L++ l+++++el+   + +++ +   e+  + ++ L+aEk+
      EPX71186.1 469 AEAST-NYQAEVSSLRAALAKSNQELELCTNVIKQLKSDLEERDAYISWLEAEKS 522
                     33333.44567889***************************************96 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.038
  HIP1_clath_bdg  33 eeelerlkeeaerkleeqkeelekLkreleakraelarlkssLesseqsg 82 
                     e  + r++   e+ l+++++e+  Lk+el +k++ +  l+ss +++e ++
      EPX71186.1 524 ESAISRARLRMEELLSDRNMEIADLKEELSDKEKIIYALRSSQQRRELAE 573
                     5667788888899999*********************9999998887665 PP

>> PKcGMP_CC  Coiled-coil N-terminus of cGMP-dependent protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.1      0.61   9.1e+02       7      13 ..     271     277 ..     267     283 .. 0.88
   2 ?    0.7   0.0      0.32   4.8e+02      10      24 ..     500     514 ..     496     518 .. 0.74
   3 ?    5.6   1.1    0.0099        15       9      29 ..     544     564 ..     534     565 .. 0.70

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.61
   PKcGMP_CC   7 DERIREL 13 
                  ERIR+L
  EPX71186.1 271 NERIRDL 277
                 59****9 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.32
   PKcGMP_CC  10 IRELEkrlaekdeEI 24 
                 I+ L   l+e+d+ I
  EPX71186.1 500 IKQLKSDLEERDAYI 514
                 677777777777766 PP

  == domain 3  score: 5.6 bits;  conditional E-value: 0.0099
   PKcGMP_CC   9 RIRELEkrlaekdeEIqELrs 29 
                  I++L + l++k++ I  Lrs
  EPX71186.1 544 EIADLKEELSDKEKIIYALRS 564
                 477888888888888887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (640 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1139  (0.0635284); expected 358.6 (0.02)
Passed bias filter:                      555  (0.0309554); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.68u 0.30s 00:00:00.98 Elapsed: 00:00:00.45
# Mc/sec: 4300.26
//
Query:       EPX71187.1  [L=669]
Description: TRAPP complex subunit Trs85 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.3e-73  248.3   0.4    1.9e-73  247.8   0.4    1.2  1  TRAPPC-Trs85  ER-Golgi trafficking TRAPP I complex 85 kDa sub


Domain annotation for each model (and alignments):
>> TRAPPC-Trs85  ER-Golgi trafficking TRAPP I complex 85 kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  247.8   0.4   1.1e-77   1.9e-73       2     405 ..     219     654 ..     218     655 .. 0.84

  Alignments for each domain:
  == domain 1  score: 247.8 bits;  conditional E-value: 1.1e-77
  TRAPPC-Trs85   2 dpleslrkllqefsnlqsslpnspkwlnpdvlryyvllhDeseeeeskaeallekikktlglecalLpinSrs........................ 74 
                    pl ++++l++e +n+++     p+++++++l+yy+++hDe+e++ + + +++ +i+++ g+++ ++++ Sr                         
    EPX71187.1 219 HPLATIMRLYKEVNNANF-----PRFMSREMLHYYLYIHDEDEHDLETSLQVFGNIQRSIGANSKFIRLRSRYidlahiqnrqspsnseynrdelkg 310
                   69999************9.....*************************************************9*99888765544433333333333 PP

  TRAPPC-Trs85  75 .....gssaasaessssadsaeeadeseplsaaeeaaslsqsesssleedl...................ssestshgalLslsdvdsirafirelv 147
                        +                    s+ ls+a+   s s+++  s +++l                   +++ +s +  +++++++ ++++++ ++
    EPX71187.1 311 egdlyN-------------------PSSLLSSASLVNSFSSPTLFSFDSELakvpeptwkspleilkeedEEKGSSLKPVIPSEEIQEMESLVTTIL 388
                   322220...................12223333333333333333334444666666666666666666555556667899**************** PP

  TRAPPC-Trs85 148 vqslipfmerkirqlneqiaqsRkgltgkLfsaskklfgsskpssssasssynaasayYsasspElqlRkLADlafmlrdyklAystYeslkkDfkn 244
                   ++++ pfm+r+++ ++e+  ++  g+tgkLfsaskk++g  k++sssa+++y+++  +Ysa+ pE++ R++AD+ fmlr yk Ay++Y+ l+k f +
    EPX71187.1 389 FEGIRPFMQRCVNSWEESTVTHYGGFTGKLFSASKKYLG--KNHSSSAQGNYDSDYFMYSADKPEAVKRRMADFLFMLREYKRAYEIYDELRKTFCQ 483
                   **************************************6..67****************************************************** PP

  TRAPPC-Trs85 245 DkawkylAgalEmaavslllsgqqlstkkkndeidpylenalqtyekrcsaklyalRcallsaelllslsd.yseaaletllkltseldda.....a 335
                   ++aw ylA++lE  +++ll++++ ++ k +++ +d+ ++ ++  y++r+++ +y  R++++++ ll ++     ++a++++ +lt+    +     +
    EPX71187.1 484 ERAWNYLASCLEAQIICLLMQNRAITPKLRTSVLDKIFNDMVLVYAARLHSLYYTSRSIVIGSLLLATRPGnCIDDAVHWFQRLTNL---NviplsK 577
                   **********************9999999**********************************998887658899999999988443...1234554 PP

  TRAPPC-Trs85 336 vrsalllEqaalcflqr.......sagltrrRKaafhmvlAahryskagqkrqalrclkqalsvykgkgWslaedhl 405
                   +  a ++  +a +f+ r       +    r RKaaf+ + +++ +  + ++++al c+k a+ +y+++ Ws +++h+
    EPX71187.1 578 FEYAFFITCLAGLFTVRaslpsldKVINGRERKAAFWFLHSIKNWLDCDHPKMALVCWKFASCIYEDSCWSVLSTHI 654
                   67777777777777777777776678889***********************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (669 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       678  (0.0378158); expected 358.6 (0.02)
Passed bias filter:                      538  (0.0300073); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.28s 00:00:00.91 Elapsed: 00:00:00.44
# Mc/sec: 4599.72
//
Query:       EPX71188.1  [L=441]
Description: vacuolar sorting protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-15   56.1   2.8    4.7e-15   55.6   2.8    1.2  1  Snf7      Snf7
  ------ inclusion threshold ------
       0.11   12.6   0.0       0.26   11.5   0.0    1.5  1  NGP1NT    NGP1NT (NUC091) domain
       0.33   11.7   1.7        1.2    9.9   0.2    2.6  2  FIVAR     FIVAR domain


Domain annotation for each model (and alignments):
>> Snf7  Snf7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.6   2.8   7.9e-19   4.7e-15       2     157 ..     245     401 ..     244     422 .. 0.89

  Alignments for each domain:
  == domain 1  score: 55.6 bits;  conditional E-value: 7.9e-19
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
        Snf7   2 airsLrkaerkldkkqeslekkikkleaelkklakkgnkdralllLKqkkryekqldqldnqlanleqvslaienlksnkevlnamkqgakamkamnkk 100
                 +i ++ +++  +++++e + +ki++l +++ + + + +k +al +L++kk + k+ d+ ++ l ++++ + +i+++  nk +l a+ +g  ++k++ ++
  EPX71188.1 245 SIAAIVESRSFISRSKELVNNKIEDLTLKVHEAISQAEKVTALTYLRRKKILLKESDRKEAALLQVDSLLSSIDGAFENKVLLSALSSGSDVLKSVVSQ 343
                 567778889999************************************************************************************999 PP

                 T.CCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTT-.GGTTHHHHHHHHHHHHHHHHHCS CS
        Snf7 101 v.didkidklmdeiedqmekaeeisEalsrsldda.deedEeeleaeLdaLeqelgdee 157
                 +  i+ + ++++ ++++    +e++ a+     ++ +++d eele+e ++L +e ++e 
  EPX71188.1 344 MgGIEHVNEILESVQEAKLDFQEVDSAVTAIN-TPeSNVDTEELEKEWEDLVKEDKKEV 401
                 945************************98766.555******************44433 PP

>> NGP1NT  NGP1NT (NUC091) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   4.3e-05      0.26      67     104 ..     154     195 ..     147     213 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 4.3e-05
      NGP1NT  67 vllkrnklPmsLledkakk....kkvklletesfeetFgpka 104
                 vl+k+ +l  sL++++a++     ++++ + +sf++tFgpk 
  EPX71188.1 154 VLVKNVELLASLIRKEAHQlqstYTSTIYTRSSFQSTFGPKL 195
                 899999*********99998887678889999********95 PP

>> FIVAR  FIVAR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1      0.42   2.5e+03      35      63 ..     277     317 ..     259     323 .. 0.53
   2 ?    9.9   0.2    0.0002       1.2      36      65 ..     347     376 ..     346     382 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.42
                 HHHHH...........HHHC....TSTTTTCCCHHHHHHHH CS
       FIVAR  35 alsaA...........nailnkt.nnpnatveqVnqalanl 63 
                 a+s+A           ++il k  + ++a   qV+  l+++
  EPX71188.1 277 AISQAekvtaltylrrKKILLKEsDRKEAALLQVDSLLSSI 317
                 44444333344444443333333144446666666666555 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.0002
                 HHHHHHHC...TSTTTTCCCHHHHHHHHHH CS
       FIVAR  36 lsaAnailnktnnpnatveqVnqalanlnq 65 
                 ++++n+il+ ++  +++ ++V+ a++++n+
  EPX71188.1 347 IEHVNEILESVQEAKLDFQEVDSAVTAINT 376
                 7899************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (441 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       833  (0.046461); expected 358.6 (0.02)
Passed bias filter:                      476  (0.0265492); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.45
# Mc/sec: 2916.10
//
Query:       EPX71189.1  [L=453]
Description: tel Two Interacting protein 2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-30  106.2   2.8    5.7e-30  104.8   0.9    2.1  2  Tti2      Tti2 family


Domain annotation for each model (and alignments):
>> Tti2  Tti2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0     0.018   3.3e+02      11     115 ..      56      97 ..      47     108 .. 0.50
   2 !  104.8   0.9   3.2e-34   5.7e-30      36     278 ..     135     363 ..     121     366 .. 0.91

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.018
        Tti2  11 pedpwtteeaaqlatsilekllsqeseefesilekiLksklrplfsksspktpkitaaGrkaalslplerfdeslsddesrkpWksgdlkaisvlawii 109
                 p+++w++ e+ +l  ++                                                               +kp+ ++ ++ +s+++  i
  EPX71189.1  56 PKENWINFENNELDVEF---------------------------------------------------------------KKPYCERAYRLLSIFEEEI 91 
                 55555555554444444...............................................................4555555555555555555 PP

        Tti2 110 rqlqsk 115
                 +q+ ++
  EPX71189.1  92 KQYVKE 97 
                 555555 PP

  == domain 2  score: 104.8 bits;  conditional E-value: 3.2e-34
        Tti2  36 seefesilekiLksklrplfsksspktpkitaaGrkaalslplerfdeslsddesrkpWksgdlkaisvlawiirqlqskeieanwplivPpiLnllDd 134
                 +ee+e++ +++L ++   lfs+      + t +Gr+ a++lp+e+f+++++d   +  Wk ++  +  vl+wi+ +  + +i + w+ ++P +L +l+d
  EPX71189.1 135 TEEKENFQNHVL-NYQSSLFSR----DDRLTGQGRRYAYELPPEKFRQDQTDALLNPSWKLKNFFIPEVLNWIVCNKNRFTIRDIWHKVIPSVLRILND 228
                 333333444444.567889999....5569********************************************************************* PP

        Tti2 135 tdtsvKlrGlklLqtlleklesskllkrtGLdsvfedallpcllyLPsltpeeeSlklLraaYpallsLaklefaekskerrklldkilregilsglsh 233
                  ++ +K +Gl+l++++l+    + +l  tGL++++ + l+ + ++LP+ + +e+  +l++ ++++l++ ak ++        +lldk+  +g++  +++
  EPX71189.1 229 LNPLIKQKGLMLVKSILDVAGLE-FLMHTGLAEILREDLMLFYTFLPPRYKAETCSSLINFSFNVLIQFAKEMP--------DLLDKLYLDGVMYIFQF 318
                 ***********************.**********************************************8877........7**************** PP

        Tti2 234 asesprlvellleqlsevveelgistvkhLkrlipllseilsnPf 278
                 as+s+ ++ l +++++ ++++l++ ++++L+ +++ l   ++nP 
  EPX71189.1 319 ASDSIPMIRLAFSECMYLMKTLNHRFLRYLSTTLDQLCLRIENPL 363
                 ***************************************999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (453 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       610  (0.0340231); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 2959.21
//
Query:       EPX71190.1  [L=200]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.5e-09   36.4   0.0    7.2e-09   35.4   0.0    1.6  1  G-patch   G-patch domain


Domain annotation for each model (and alignments):
>> G-patch  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.4   0.0     4e-13   7.2e-09       2      44 ..     114     160 ..     113     161 .. 0.91

  Alignments for each domain:
  == domain 1  score: 35.4 bits;  conditional E-value: 4e-13
     G-patch   2 sniGvkmLqkmGWkp...GqGLGkkeqGiaePieakikkdr.aGlGa 44 
                 +++G+++L++ GW+p    +GLG ++qG+++P++ +++k++  G+G 
  EPX71190.1 114 ESLGFRVLSQFGWSPkgdVSGLGAEHQGRRAPVRHTRVKNDtLGIGV 160
                 89*************96669*****************9999888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       502  (0.0279993); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.30s 00:00:00.79 Elapsed: 00:00:00.49
# Mc/sec: 1236.75
//
Query:       EPX71191.1  [L=545]
Description: pig-T [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.2e-162  542.3   0.0   1.8e-162  541.7   0.0    1.2  1  Gpi16     Gpi16 subunit, GPI transamidase component
     0.0096   16.3   0.7      0.029   14.8   0.1    2.2  2  ITAM      Immunoreceptor tyrosine-based activation motif


Domain annotation for each model (and alignments):
>> Gpi16  Gpi16 subunit, GPI transamidase component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  541.7   0.0    2e-166  1.8e-162       6     559 .]      14     541 ..       7     541 .. 0.93

  Alignments for each domain:
  == domain 1  score: 541.7 bits;  conditional E-value: 2e-166
       Gpi16   6 llaasv.eaaeeysEeLlLrpLpdskllasfeFesetslaefeaq.....hfrlfPrslgqilqkanvrelhlrftqGrWdaeswgarplnglkeggtG 98 
                 l+++   + +e+y+E L+L++L++++ +asf+Fe++t+ ++ +++     ++++fP sl++ +++++v +lh+r t+GrWd+  w++ p ng ++gg G
  EPX71191.1  14 LFSFGYsSLNESYNEGLYLENLSNRHTYASFTFEIDTKANREDRYafsesNYQFFPLSLARTMKDQKVMDLHVRATRGRWDYGFWKQPPDNGFHSGGSG 112
                 333333033559*************************9977666677777************************************************* PP

       Gpi16  99 velwavleaetdeeadakwlkLtnaLsGlfCaslnfidstrttrPalsfqpegdhseseklkllygslPrevvCtENLtpflkLLPckgkaGissLLdg 197
                 +e+wa++ +++d     +w kLt++LsGlfC s n id+ +t++P lsf p+ +   s++++++++slP+e vCtENL+++lk+LPck++aGi+sLL++
  EPX71191.1 113 FEVWASFIDDQDLD---SWYKLTSQLSGLFCFSSNNIDELNTYEPLLSFVPSWS---STSHTRYFASLPQESVCTENLSSLLKFLPCKNRAGIASLLNS 205
                 *******9999988...9*********************************988...4688999*********************************** PP

       Gpi16 198 hklfdasyqsmsidvrpvceeeeseckleleqtidlvldverskrkr.dnpiprpt.......padelkCdtskPldkaeeqewsLeelFgrklkgacp 288
                 h lfd+++ s+sid+ p+   +++ ++++l  +i++v+dver++r++ ++ +  p+        +d l+C t++    ++ + ++Le+lF+++l+++cp
  EPX71191.1 206 HLLFDTDWYSLSIDIVPNL--TDDLSSMKLIVKIQTVIDVERTNRRKlETRFSSPPefcgddiAHDPLRCLTAT----YTASFHTLEDLFHKTLEKKCP 298
                 *****************97..888999*****************999888888888777766677788888777....8888899************** PP

       Gpi16 289 levclevaksskvyvqrkaseeakeakkedesskallsykleeekefdlaltskeaskeapleepllyaersltgsgqerGglqiiltnpsaseevefv 387
                 +      +++s++yv              ++ss+ ++ y le +ke+ + ++s+e     +   +++ +erslt+sg+++Gg+ +++tnp+ +e++++v
  EPX71191.1 299 F-----KSSESDIYV--------------KNSSSLVVGYPLEMAKEISIPVISEE-----R-PGSPVLVERSLTNSGNHWGGIISTFTNPT-DESYSIV 371
                 *.....89999****..............456668999***99998888888883.....2.356789***********************.99***** PP

       Gpi16 388 yfeslPWfvrvylhtLkvelddkaekksesevikelyyrPaldrkrptqlelllelPaestvvltydfekaiLryteYpPDAnrGfdiaaAvitvleek 486
                 yfe lPW+ rvylht+k+ ++d+  + +  +++++  y+P +drk +t++e ++++Pa+s+vv++yd+ek++Lr++eYpPDAnrG+d+++++++v +++
  EPX71191.1 372 YFERLPWYARVYLHTMKIAVNDQ--PVTCIDFFQDQVYQPLKDRKAGTMIESRFTIPARSSVVMSYDIEKTTLRLQEYPPDANRGYDLPPSIVSVYNTD 468
                 ***********************..999*********************************************************************** PP

       Gpi16 487 sseavelrttslLlsLptPDfSMPYNViiltsTvlaLafGslfnlltrrfvaeeeaeekskkslkaklkeklk 559
                 + e ++lrt++lLl +ptPDfSMPYNViiltsT++aL+fG+ fn+ltr++v ++e ++++k+sl +++++klk
  EPX71191.1 469 DVEICQLRTSALLLFIPTPDFSMPYNVIILTSTIMALTFGGSFNFLTRKIVPVSELPKSKKSSLFQRIRSKLK 541
                 ********************************************************************99985 PP

>> ITAM  Immunoreceptor tyrosine-based activation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1      0.96   8.6e+03       3       7 ..     151     155 ..     150     155 .. 0.81
   2 !   14.8   0.1   3.2e-06     0.029       1      14 [.     404     417 ..     404     417 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.96
        ITAM   3 lYqpL 7  
                 +Y+pL
  EPX71191.1 151 TYEPL 155
                 79998 PP

  == domain 2  score: 14.8 bits;  conditional E-value: 3.2e-06
        ITAM   1 dqlYqpLnkrdrdt 14 
                 dq+YqpL++r++ t
  EPX71191.1 404 DQVYQPLKDRKAGT 417
                 9*********9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (545 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       325  (0.0181271); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.45
# Mc/sec: 3612.20
//
Query:       EPX71192.1  [L=664]
Description: STE/STE20/PAKA protein kinase Shk1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.9e-73  246.5   0.0    4.2e-73  246.0   0.0    1.2  1  Pkinase         Protein kinase domain
    5.9e-48  163.4   0.0      1e-47  162.6   0.0    1.2  1  Pkinase_Tyr     Protein tyrosine kinase
      2e-23   82.5   1.0    6.6e-23   80.8   0.0    2.4  3  PBD             P21-Rho-binding domain
    1.6e-08   34.3   0.0    2.6e-08   33.5   0.0    1.4  1  Kinase-like     Kinase-like
    2.2e-07   30.0   0.3    4.8e-07   28.9   0.3    1.8  1  Pkinase_fungal  Fungal protein kinase
    0.00051   19.7   0.0    0.00099   18.8   0.0    1.4  1  DSHCT           DSHCT (NUC185) domain
  ------ inclusion threshold ------
      0.014   14.8   0.2      0.031   13.6   0.1    1.6  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
      0.051   13.2   0.0        0.1   12.2   0.0    1.5  1  FTA2            Kinetochore Sim4 complex subunit FTA2
      0.053   13.4   0.0        0.1   12.5   0.0    1.5  1  APH             Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  246.0   0.0   2.1e-76   4.2e-73       1     264 []     393     644 ..     393     644 .. 0.94

  Alignments for each domain:
  == domain 1  score: 246.0 bits;  conditional E-value: 2.1e-76
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHH CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseee 99 
                 y++ +k+G+G++G V++a++  t+  vA+Kk++ +++ kk+   +++Ei ++k+ +h+niv+++++f  k+el++++ey++gg+l+++++ + +l+e +
  EPX71192.1 393 YRNFTKIGQGASGDVFSARQVGTNLSVAIKKMNINQQPKKEF--IVNEILVMKSHHHKNIVNFIDTFFFKSELWMIMEYMRGGSLTEVVT-NNTLTEGQ 488
                 67889******************************9999876..*********************************************7.799***** PP

                 HHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.BCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-ST CS
     Pkinase 100 akkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.ltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgkppf 197
                 +  i++++legl++lH++gi+HrD+K++NiL++ +g++K+tDFG++++++s+ +  t++vgt++++APEv++++ey+ kvDvWslG++ +e++ g+pp+
  EPX71192.1 489 MATICRETLEGLRHLHRNGIVHRDIKSDNILLSLQGDVKLTDFGFCAQINSQMSkRTTMVGTPYWMAPEVVTRKEYGFKVDVWSLGIMAIEMVEGEPPY 587
                 **************************************************998879******************************************* PP

                 TTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 198 sgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                    ++     + l+ l  i+ i    + k+ + + +s+ + d+l+k l+++pk R++ eell+hp+l
  EPX71192.1 588 L--NE-----NPLRALYLIATI---GTPKVSRSELLSSAFNDFLTKSLNVNPKIRPSSEELLRHPFL 644
                 *..22.....246665545554...5679999*********************************97 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  162.6   0.0     5e-51     1e-47       5     257 ..     397     640 ..     394     641 .. 0.94

  Alignments for each domain:
  == domain 1  score: 162.6 bits;  conditional E-value: 5e-51
                  EEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBH CS
  Pkinase_Tyr   5 kklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekekltl 102
                  +k+G+Ga G+V++++       ++++Va+K+++ +++ + ke +++e+ +mk+ +h+niv+++     +++l++++ey++gG+L + ++++   +lt 
   EPX71192.1 397 TKIGQGASGDVFSARQV----GTNLSVAIKKMNINQQPK-KEFIVNEILVMKSHHHKNIVNFIDTFFFKSELWMIMEYMRGGSLTEVVTNN---TLTE 486
                  68************999....99*********7666665.788899*********************99*******************998...9*** PP

                  HHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHHHHHHT CS
  Pkinase_Tyr 103 kdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEift 200
                   ++  ++ +  +G+++L+++ +vHrd+ + N+Lls +  vk++DfG + +i  +++++k+++      WmapE++++k++  k DvWs G++ +E+++
   EPX71192.1 487 GQMATICRETLEGLRHLHRNGIVHRDIKSDNILLSLQGDVKLTDFGFCAQI--NSQMSKRTTMVGTPYWMAPEVVTRKEYGFKVDVWSLGIMAIEMVE 582
                  ***************************************************..888899999999999*****************************9 PP

                  TSSGTTTTSHHHHHHHHH..HTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 201 lgespypglkneevlekl..kegkrlekpekcpeelyelmkkcweedpeeRptfselve 257
                   ge py + ++ ++l  +      ++++ e  +++++++++k+++ +p+ Rp+ +el++
   EPX71192.1 583 -GEPPYLNENPLRALYLIatIGTPKVSRSELLSSAFNDFLTKSLNVNPKIRPSSEELLR 640
                  .********99998888843455679999************************999865 PP

>> PBD  P21-Rho-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.8   0.0   3.3e-26   6.6e-23       2      59 .]     153     210 ..     152     210 .. 0.98
   2 ?   -2.1   0.0       2.6   5.1e+03      37      55 ..     276     294 ..     268     295 .. 0.86
   3 ?   -3.3   0.1       6.3   1.3e+04      37      56 ..     420     438 ..     417     439 .. 0.74

  Alignments for each domain:
  == domain 1  score: 80.8 bits;  conditional E-value: 3.3e-26
                 B---EEEEEEEEEEEETTTTEEES--CCHCCCHHHT.TTSXXXBEXXXXXXXXXXXXX CS
         PBD   2 IStPtnfkHtvHVGwdgdsgnftglPpewkkllkssgItedelkenpkavlsvdkfrs 59 
                 IS+P+++kH++HVG++ ++g+ftg+P+ew+ llk+sgIt++e+ ++p+avl+++ f+s
  EPX71192.1 153 ISSPFDPKHVTHVGFNYETGEFTGMPTEWQALLKVSGITKSEQVQHPQAVLDAMAFYS 210
                 9*******************************************************96 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 2.6
                 T.TTSXXXBEXXXXXXXXX CS
         PBD  37 sgItedelkenpkavlsvd 55 
                 s+I ++++ + pk+++s++
  EPX71192.1 276 SSIASPKPVKSPKQFTSHQ 294
                 569999********99976 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 6.3
                 T.TTSXXXBEXXXXXXXXXX CS
         PBD  37 sgItedelkenpkavlsvdk 56 
                 + I++ + +++pk+ ++v++
  EPX71192.1 420 A-IKKMNINQQPKKEFIVNE 438
                 4.888899999998887765 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.5   0.0   1.3e-11   2.6e-08      98     243 ..     441     580 ..     398     593 .. 0.75

  Alignments for each domain:
  == domain 1  score: 33.5 bits;  conditional E-value: 1.3e-11
  Kinase-like  98 fiqlkskesiywvvnallllpaasvdl.....eilnkvlqkrsethkkletiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggfta 190
                  +++ + +++i   ++ ++   +  + +     + l +v+ ++  t+ + +ti+r  l         +L+ +g+vh ++++dn+ll  +g ++l++f+ 
   EPX71192.1 441 VMKSHHHKNIVNFIDTFFFKSELWMIMeymrgGSLTEVVTNNTLTEGQMATICRETLEG-----LRHLHRNGIVHRDIKSDNILLSLQGDVKLTDFGF 533
                  334444455555555555555544444888888999999999999**********9943.....56******************************99 PP

  Kinase-like 191 Lvragtkvvl..seve.kgfaPpEllgsrggytrknktkmthkldaWqlGlviyri 243
                    +   ++     +v    +  pE++ +          ++ +k+d+W lG+ +  +
   EPX71192.1 534 CAQINSQMSKrtTMVGtPYWMAPEVVTR---------KEYGFKVDVWSLGIMAIEM 580
                  9888877764113333222355666666.........5789**********98766 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.9   0.3   2.4e-10   4.8e-07     306     396 ..     487     569 ..     284     573 .. 0.89

  Alignments for each domain:
  == domain 1  score: 28.9 bits;  conditional E-value: 2.4e-10
  Pkinase_fungal 306 kellealrDaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlkgeeHsyrhD 396
                      ++ + +r+ ++g+r L+   gi+HrDi  +Nil+       +    L D+ +  +++  s+ s++ + +GT+++ma ev+  +e  +  D
      EPX71192.1 487 GQMATICRETLEGLRHLH-RNGIVHRDIKSDNILLS-----LQGDVKLTDFGFCAQIN--SQMSKRTTMVGTPYWMAPEVVTRKEYGFKVD 569
                     45666789999*******.*****************.....567788***********..67778899************99776666555 PP

>> DSHCT  DSHCT (NUC185) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0     5e-07   0.00099      73     136 ..     442     505 ..     400     515 .. 0.75

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 5e-07
       DSHCT  73 l.keiaeriakvsvesrldlglvevvyaWakgasfaellektdldeGdiVRllrrleellrqlak 136
                 + + ++++i ++ +++ +  +  +++ ++++g s++e++++ +l+eG++  ++r + e lr+l++
  EPX71192.1 442 MkSHHHKNIVNF-IDTFFFKSELWMIMEYMRGGSLTEVVTNNTLTEGQMATICRETLEGLRHLHR 505
                 234555566656.77656555567888**********************************9975 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   1.5e-05     0.031     104     170 ..     474     535 ..     460     545 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.5e-05
         Kdo 104 dLedllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDldkar 170
                 +L++++++ ++l e   +++ +++    + lhr g+ H+d+   nill  ++     + l D+  ++
  EPX71192.1 474 SLTEVVTN-NTLTEGQMATICRETLEGLRHLHRNGIVHRDIKSDNILLSLQG----DVKLTDFGFCA 535
                 67777775.55666666677777777899**********************9....77788886665 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   5.2e-05       0.1     173     211 ..     488     531 ..     416     534 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 5.2e-05
        FTA2 173 levsqlpkllrdlkklhklgIvvrDlkeenyi.....dgkLvDl 211
                     + ++ l+ l+ lh+ gIv+rD+k++n++     d kL D+
  EPX71192.1 488 QMATICRETLEGLRHLHRNGIVHRDIKSDNILlslqgDVKLTDF 531
                 344567899*********************97444334456665 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0     5e-05       0.1     157     196 ..     498     534 ..     459     537 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 5e-05
                 HHH--SSS-EEEE-SS-SGGGEEEC...TTEEEEE---TT- CS
         APH 157 aallpgelptvllHgDlhpgNllvd.pddgrvtGviDfeda 196
                 + l++   + +++H+D++++N+l+  ++d +   + Df+++
  EPX71192.1 498 EGLRH-LHRNGIVHRDIKSDNILLSlQGDVK---LTDFGFC 534
                 33333.579***************9777666...5777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (664 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       841  (0.0469072); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.68u 0.27s 00:00:00.95 Elapsed: 00:00:00.43
# Mc/sec: 4605.71
//
Query:       EPX71193.1  [L=106]
Description: ribosomal protein subunit L32 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.8e-17   61.5   4.9    8.7e-17   61.1   4.9    1.2  1  Ribosomal_L32p  Ribosomal L32p protein family
  ------ inclusion threshold ------
       0.11   12.3   0.6       0.99    9.3   0.1    2.2  2  Rad50_zn_hook   Rad50 zinc hook motif


Domain annotation for each model (and alignments):
>> Ribosomal_L32p  Ribosomal L32p protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.1   4.9   9.7e-21   8.7e-17       1      52 [.      47      99 ..      47     103 .. 0.91

  Alignments for each domain:
  == domain 1  score: 61.1 bits;  conditional E-value: 9.7e-21
                    S--SS---HHHHHHHGGG.T-----.-EEEETTTCCEECTTC-BTTTTBSSSBX CS
  Ribosomal_L32p  1 AVPKrKtSksrrrkRrah.wklkap.nlvecpncgelklpHrvcpscGyYkgre 52
                    AVPK+KtS+s++r+R  + ++lk + nl++cp+c+++kl H++cpsc y   r+
      EPX71193.1 47 AVPKKKTSYSKKRSRFLAgKALKDKtNLNRCPVCHSFKLTHHMCPSC-YKGLRQ 99
                    9**************99978***************************.555555 PP

>> Rad50_zn_hook  Rad50 zinc hook motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.1   0.00011      0.99      14      26 ..      69      81 ..      57      82 .. 0.68
   2 ?    1.4   0.1     0.033     3e+02      20      33 ..      88     101 ..      84     106 .] 0.76

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00011
                   HHTT-SEE-TTT- CS
  Rad50_zn_hook 14 elkeakgcCPlCg 26
                   + k + ++CP+C+
     EPX71193.1 69 KDKTNLNRCPVCH 81
                   3333334*****8 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.033
                    EE-TTT--EE-HHH CS
  Rad50_zn_hook  20 gcCPlCgReldeeh 33 
                    + CP C + l +e 
     EPX71193.1  88 HMCPSCYKGLRQEW 101
                    47****99998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       517  (0.028836); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.22s 00:00:00.57 Elapsed: 00:00:00.38
# Mc/sec: 846.28
//
Query:       EPX71194.1  [L=235]
Description: kinetochore protein Spc25 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.9e-25   88.8   0.5    1.9e-25   88.8   0.5    2.1  2  Spindle_Spc25    Chromosome segregation protein Spc25
    0.00011   21.2  16.5    0.00015   20.8  16.5    1.1  1  Spc7             Spc7 kinetochore protein
     0.0015   18.9  10.2     0.0015   18.9  10.2    2.3  2  CC2-LZ           Leucine zipper of domain CC2 of NEMO, NF-kap
      0.007   16.9  19.3      0.007   16.9  19.3    2.5  3  APG6_N           Apg6 coiled-coil region
  ------ inclusion threshold ------
      0.022   15.1  14.5      0.026   14.9   5.9    3.2  3  CLZ              C-terminal leucine zipper domain of cyclic n
       0.14   12.2   9.7       0.59   10.2   8.5    2.4  3  DUF1664          Protein of unknown function (DUF1664)
        0.2   11.1   7.3       0.29   10.5   7.3    1.4  1  DUF4349          Domain of unknown function (DUF4349)
       0.62   10.5  12.4        1.2    9.6  12.4    1.5  1  SLX9             Ribosome biogenesis protein SLX9
        1.2    8.9  12.7       0.71    9.7  10.7    1.7  2  PCRF             PCRF domain
        1.8    9.0  17.6       0.19   12.2   2.8    3.1  3  Snapin_Pallidin  Snapin/Pallidin
        2.3    6.0  11.7        3.5    5.4  11.7    1.3  1  V_ATPase_I       V-type ATPase 116kDa subunit family
        3.5    8.0   4.6         15    5.9   0.1    2.9  3  DUF948           Bacterial protein of unknown function (DUF94
        4.6    6.5  13.0        6.5    6.0  13.0    1.2  1  DUF4407          Domain of unknown function (DUF4407)
          7    6.1  13.6         10    5.6  13.6    1.2  1  Exonuc_VII_L     Exonuclease VII, large subunit


Domain annotation for each model (and alignments):
>> Spindle_Spc25  Chromosome segregation protein Spc25
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1         5   6.5e+03      57      71 ..      23      37 ..       6      39 .. 0.57
   2 !   88.8   0.5   1.5e-28   1.9e-25       2      73 .]     158     227 ..     157     227 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 5
  Spindle_Spc25 57 etndlgkFlkevRka 71
                    +  + +Fl + Rk+
     EPX71194.1 23 FNSIFDRFLQDERKQ 37
                   334566777777776 PP

  == domain 2  score: 88.8 bits;  conditional E-value: 1.5e-28
  Spindle_Spc25   2 ieedklkfvFtnidpkdperefsftLdvsedtyevlecsPkLedeeleelleeLnetndlgkFlkevRkaFk 73 
                    ++e++++fvFtnid+k+++r+fsf++++s  +yev++c+P L+   l+ l+++Ln+++d+++Fl+++Rk F+
     EPX71194.1 158 VHEEVIRFVFTNIDEKNWDRPFSFQINLSHIDYEVTHCRPLLPT--LDNLVHKLNQSRDFYQFLRDIRKGFV 227
                    57899**************************************8..***********************996 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8  16.5   1.2e-07   0.00015     147     278 ..       5     139 ..       2     167 .. 0.86

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 1.2e-07
        Spc7 147 nlegleedkelLekqeeeldellpel..eeekaeleeeleklqeaaeelesid..keeLeelreelaelkaeieekkkelaelqeqleeleekieelke 241
                 n+ +le  ++ L+++ ++++++ +++  +e+k+ l+++ e+l++ ++  e+ +  ++ L  l+ + ++ ++ +e+ + e +  ++++++++ k+e++++
  EPX71194.1   5 NFPELELNYNDLKSKISNFNSIFDRFlqDERKQLLNNKNEHLKKLSNVYENQKniEKTLDHLQAREQTYNELLEKERVEREATEQEIQTIQGKVEAMQK 103
                 6667888899999999*****9999733567889999999999977777775545677999999999999999999999******************** PP

        Spc7 242 qkseleeeiaeaervleeckgwsesevsrlkeevkal 278
                 +k+++ +ei++++ vl  +k+ +++e+++ k + ++l
  EPX71194.1 104 RKQTVLDEIERSRAVLT-TKQQTKEELESSKRKQEQL 139
                 **********9988888.7788999999999998887 PP

>> CC2-LZ  Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9  10.2   1.2e-06    0.0015      27      97 ..      36     106 ..      11     109 .. 0.87
   2 ?    2.7   0.8      0.13   1.7e+02      79     100 .]     119     140 ..     110     147 .. 0.76

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 1.2e-06
      CC2-LZ  27 eealaakqeeidelkeeikkkeeele.tisvlkaQaevYrsDFeaEReaReklheekerlaaqleelqkqne 97 
                  + l++k+e++++l +  +++++ +e t+++l+a  + Y++  e+ER +Re   +e ++++ ++e +qk+ +
  EPX71194.1  36 KQLLNNKNEHLKKLSNVYENQKN-IEkTLDHLQAREQTYNELLEKERVEREATEQEIQTIQGKVEAMQKRKQ 106
                 56799*********999888887.665******************************************987 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.13
      CC2-LZ  79 heekerlaaqleelqkqneqLk 100
                  ++k++ +++le  ++++eqL+
  EPX71194.1 119 LTTKQQTKEELESSKRKQEQLN 140
                 4578888888888888888875 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   9.9      0.08     1e+02      52     100 ..      31      79 ..       8      84 .. 0.85
   2 !   16.9  19.3   5.5e-06     0.007      13     110 ..      58     155 ..      56     161 .. 0.89
   3 ?   -3.4   0.0       9.9   1.3e+04      11      29 ..     199     217 ..     196     224 .. 0.64

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.08
      APG6_N  52 leeeleklekeeeelleeLkelekereeleaelaaleeelealeeeeer 100
                 l++e ++l + ++e l++L ++ ++++++e+ l  l++ ++  +e  e+
  EPX71194.1  31 LQDERKQLLNNKNEHLKKLSNVYENQKNIEKTLDHLQAREQTYNELLEK 79 
                 6888999999999999999999999999999999999999988876665 PP

  == domain 2  score: 16.9 bits;  conditional E-value: 5.5e-06
      APG6_N  13 eldkqleqaekerdaYeeflkklkkekkeeekqdeeleeleeeleklekeeeelleeLke...lekereeleaelaaleeelealeeeeerfwreynel 108
                 +++k l+ +++  ++Y+e l+k + e++ +e   +e++ ++ ++e+++k +++ l e+++   + +++++ ++el++ +++ e+l+  e +fw++y  l
  EPX71194.1  58 NIEKTLDHLQAREQTYNELLEKERVEREATE---QEIQTIQGKVEAMQKRKQTVLDEIERsraVLTTKQQTKEELESSKRKQEQLNMPELQFWQDYLGL 153
                 78999****************9999977765...7********************999862226789****************************9766 PP

      APG6_N 109 ql 110
                 ++
  EPX71194.1 154 RM 155
                 65 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 9.9
      APG6_N  11 leeldkqleqaekerdaYe 29 
                 l +ld+ ++++++ rd Y+
  EPX71194.1 199 LPTLDNLVHKLNQSRDFYQ 217
                 5566666777777777664 PP

>> CLZ  C-terminal leucine zipper domain of cyclic nucleotide-gated channels
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.1      0.78     1e+03      28      61 ..      15      49 ..       7      52 .. 0.64
   2 ?    3.6   1.2     0.067        86      24      46 ..      47      69 ..      34      75 .. 0.71
   3 ?   14.9   5.9   2.1e-05     0.026      19      63 ..      77     121 ..      70     132 .. 0.87

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.78
         CLZ 28 eleekverLessLea.LqtrlarLlaeyessqrkL 61
                +l++k+++++s  +  Lq+  ++Ll++ ++  +kL
  EPX71194.1 15 DLKSKISNFNSIFDRfLQDERKQLLNNKNEHLKKL 49
                56666666666666436777777777776666666 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.067
         CLZ 24 aeqkeleekverLessLeaLqtr 46
                ++  ++ e+ +++e++L++Lq r
  EPX71194.1 47 KKLSNVYENQKNIEKTLDHLQAR 69
                55567778889999999999988 PP

  == domain 3  score: 14.9 bits;  conditional E-value: 2.1e-05
         CLZ  19 aakagaeqkeleekverLessLeaLqtrlarLlaeyessqrkLkq 63 
                  +k++ e++ +e+ ++ +++++ea+q+r + +l+e e s + L+ 
  EPX71194.1  77 LEKERVEREATEQEIQTIQGKVEAMQKRKQTVLDEIERSRAVLTT 121
                 45667999******************************9998865 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   8.5   0.00046      0.59      36     111 ..      35     113 ..      25     124 .. 0.85
   2 ?   -0.0   0.8      0.67   8.6e+02      54      77 ..     115     138 ..     101     156 .. 0.61
   3 ?   -1.1   0.0       1.5   1.9e+03      94     122 ..     183     211 ..     177     213 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00046
     DUF1664  36 krslsdavesvskqleqvs...eslaatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeave 111
                 ++ l +  ++  k+l +v+   +++++t +hL++r ++ ++ l++     +++++e+++++++++++++  ++v + +e
  EPX71194.1  35 RKQLLNNKNEHLKKLSNVYenqKNIEKTLDHLQAREQTYNELLEKERVEREATEQEIQTIQGKVEAMQKRKQTVLDEIE 113
                 5666666777778888888555689*******************************************99998876665 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.67
     DUF1664  54 seslaatkrhLssridrvdkklde 77 
                 s ++ +tk++ ++++++  +k+++
  EPX71194.1 115 SRAVLTTKQQTKEELESSKRKQEQ 138
                 344555566666666655555554 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 1.5
     DUF1664  94 edlseigedvesvkeavegleskleriee 122
                  +ls+i+ +v++ + +  +l++ ++++++
  EPX71194.1 183 INLSHIDYEVTHCRPLLPTLDNLVHKLNQ 211
                 57788888888888888888887777754 PP

>> DUF4349  Domain of unknown function (DUF4349)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   7.3   0.00023      0.29      91     168 ..      59     134 ..      13     153 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00023
     DUF4349  91 leaRlkaleasedrllallekaksvedlleiereLsevqaeieslegqlryLdnqvaystvtvtlrepeaeteaeeee 168
                 +e  l  l+a e+ + +llek     +  + e+e++++q   e+++++ ++  ++++ s+  +t +++++e+ ++++ 
  EPX71194.1  59 IEKTLDHLQAREQTYNELLEKERVERE--ATEQEIQTIQGKVEAMQKRKQTVLDEIERSRAVLTTKQQTKEELESSKR 134
                 6778999************99887776..579****************************999999988887666554 PP

>> SLX9  Ribosome biogenesis protein SLX9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6  12.4   0.00091       1.2      33     120 ..      42     128 ..      16     146 .. 0.73

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00091
        SLX9  33 kkkrkrrpskklvtdlesLadaLpdleeeege.kkekkekeqaqqgkvkkaekslkskpgalkrkkklekkEmerfkkvLahpsfksnp 120
                 k++   ++  ++  + + +++ L+ l+++e++ ++  ++++ ++++ +++  ++ + k +a++++k+ +  E+er ++vL++++ ++  
  EPX71194.1  42 KNEH-LKKLSNVYENQKNIEKTLDHLQAREQTyNELLEKERVEREATEQE-IQTIQGKVEAMQKRKQTVLDEIERSRAVLTTKQQTKEE 128
                 2222.234467778999999999999988887555545444444444444.35****************************99988865 PP

>> PCRF  PCRF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7  10.7   0.00055      0.71      15     104 ..      37     120 ..      10     125 .. 0.68
   2 ?    3.6   5.5     0.042        53      20      82 ..      80     139 ..      68     148 .. 0.55

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00055
                 GGGTTTGGGSSSTTHHHHHTHHHHHHHHHHHHHTTTHHH...HT....-S-..-GGGTHHHHHHHHHH..HHHHHT-..SSSTTSEEEEE CS
        PCRF  15 pevwedqekakklskelaeleeivealeeleealedleeakelleedeelaelaeeeleelekeleeleeelkklLlpkdendeknaile 104
                 + + +++e++kkls+ +++ ++i ++l++l++++++ +e   lle+++  +e  e+e+++++ ++e+++++ +++L   de +++ a+l+
  EPX71194.1  37 QLLNNKNEHLKKLSNVYENQKNIEKTLDHLQAREQTYNE---LLEKERVEREATEQEIQTIQGKVEAMQKRKQTVL---DEIERSRAVLT 120
                 334455566666666666666666666666666666666...663444444555889***********77666666...56666666665 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.042
                 TGGGSSSTTHHHHHTHHHHHHHHHHHHH.TTTHHH...HT....-S-..-GGGTHHHHHHHHHH CS
        PCRF  20 dqekakklskelaeleeivealeeleea.ledleeakelleedeelaelaeeeleelekeleel 82 
                 ++ + +++ +e++ ++  vea+++ +++ l+++e  +++l      ++  +eele+ +++ e+l
  EPX71194.1  80 ERVEREATEQEIQTIQGKVEAMQKRKQTvLDEIERSRAVL----TTKQQTKEELESSKRKQEQL 139
                 3334445566666666666666665543145555555555....44555555666555555555 PP

>> Snapin_Pallidin  Snapin/Pallidin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   2.8   0.00014      0.19      28      85 ..      12      69 ..       4      72 .. 0.92
   2 ?    1.3   6.5      0.37   4.8e+02      11      58 ..      87     132 ..      84     141 .. 0.72
   3 ?   -1.4   0.0       2.5   3.2e+03      34      46 ..     200     212 ..     193     222 .. 0.56

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00014
  Snapin_Pallidin 28 sQeeLleqldrlnekLkeleeaqeaevlpdlkeyakKLvnikkrmsslnerlqklkkR 85
                     + ++L++++++ n+ ++++ +++ +++l++ +e++kKL+n+  + ++++++l +l++R
       EPX71194.1 12 NYNDLKSKISNFNSIFDRFLQDERKQLLNNKNEHLKKLSNVYENQKNIEKTLDHLQAR 69
                     55789******************9999*****************************99 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.37
  Snapin_Pallidin  11 lepkldeldeklkelrqsQeeLleqldrlnekLkeleeaqeaevlpdl 58 
                       e ++++++ k+++ ++  + +l++++r ++ L+  ++++e   l+  
       EPX71194.1  87 TEQEIQTIQGKVEAMQKRKQTVLDEIERSRAVLTTKQQTKE--ELESS 132
                      56788999999999999999999999999999985555555..34444 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 2.5
  Snapin_Pallidin  34 eqldrlnekLkel 46 
                       +ld+l +kL++ 
       EPX71194.1 200 PTLDNLVHKLNQS 212
                      3344444444433 PP

>> V_ATPase_I  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4  11.7    0.0027       3.5      11     348 ..      13     115 ..       4     177 .. 0.39

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0027
  V_ATPase_I  11 frDlnedvnafqrkfvkevrrcdemerklrfleeeieklekavikeeea......eesleapeekeldeleeelekleeelkelnenleklkkelnelv 103
                 ++Dl++++++f+  f + ++  de ++ l+  +e+++kl+++  +++++       + +e++ ++ l++   e e +e+e+++++ + e+++k++++++
  EPX71194.1  13 YNDLKSKISNFNSIFDRFLQ--DERKQLLNNKNEHLKKLSNVYENQKNIektldhLQAREQTYNELLEKERVEREATEQEIQTIQGKVEAMQKRKQTVL 109
                 44455554444444443332..22222222222222222222222222211111133333333333333333444444555555555555444444333 PP

  V_ATPase_I 104 elkavlekakefleeeeeeeeeeeseeeeeekeeeeeeeseeeeeeelleeeeelsfvaGvikrekveaferilwralrgnlflrqaeieepledpetg 202
                 ++                                                                                                 
  EPX71194.1 110 DE------------------------------------------------------------------------------------------------- 111
                 22................................................................................................. PP

  V_ATPase_I 203 ekveksvfiiffqgeqlkekikkicesfgaklyelpeseeereeklkeveeriedlekvleqteealkevleeiakeleewklkvkkekaiyhtLnlfn 301
                                                                                                                    
  EPX71194.1   - ---------------------------------------------------------------------------------------------------   -
                 ................................................................................................... PP

  V_ATPase_I 302 ldvtkkvliaegWvpkeeleeiqkalkeateessssvpsilneietk 348
                                                            ie +
  EPX71194.1 112 -------------------------------------------IERS 115
                 ...........................................2211 PP

>> DUF948  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.1     0.012        15      47      88 ..      33      67 ..      11      68 .. 0.82
   2 ?    1.6   1.5      0.25   3.2e+02      37      66 ..      86     115 ..      71     137 .. 0.70
   3 ?   -1.6   0.0       2.6   3.4e+03      43      58 ..     196     211 ..     189     225 .. 0.72

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.012
      DUF948 47 kevedllakvnelledvneklekvdplteavadlgesvseln 88
                +e ++ll++ ne       +l+k+ ++ e+ +++ +++ +l+
  EPX71194.1 33 DERKQLLNNKNE-------HLKKLSNVYENQKNIEKTLDHLQ 67
                455566666666.......*****************999885 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.25
      DUF948  37 elekqvdpilkevedllakvnelledvnek 66 
                  +e++++ i  +ve++ +  +++l+++++ 
  EPX71194.1  86 ATEQEIQTIQGKVEAMQKRKQTVLDEIERS 115
                 456677777777777777777766666654 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 2.6
      DUF948  43 dpilkevedllakvne 58 
                 +p+l  +++l++k n+
  EPX71194.1 196 RPLLPTLDNLVHKLNQ 211
                 5667777788888887 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0  13.0    0.0051       6.5     112     223 ..      38     140 ..       8     145 .. 0.54

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0051
     DUF4407 112 laeeqqeeakelkeqlaaaltaelaeleaqiaalqaeidaaearldalraeaqkeldgtkgtgttgvaGkgpaake.kkaqldaaqaelaelkakldat 209
                 l  +++e+ k+l++ +         e++++i++    ++a e+++++l ++ + e + t  ++++ ++Gk +a+++ k++ ld++++  a l++k + +
  EPX71194.1  38 LLNNKNEHLKKLSNVY---------ENQKNIEKTLDHLQAREQTYNELLEKERVEREAT-EQEIQTIQGKVEAMQKrKQTVLDEIERSRAVLTTKQQTK 126
                 2222222222222222.........2222333333333333333333333333333322.445555666666655437778888888888888887788 PP

     DUF4407 210 arlaalraelaele 223
                 ++l++ ++++++l+
  EPX71194.1 127 EELESSKRKQEQLN 140
                 88888877777775 PP

>> Exonuc_VII_L  Exonuclease VII, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6  13.6    0.0078        10     155     260 ..      30     140 ..       6     151 .. 0.37

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0078
  Exonuc_VII_L 155 rlekaikrlleekkqrleklasrlkspeellerkrqrldeleerleralkkq...lkkkrerleelkerlkekleekkerl....kklkerlellee 244
                    l+++ k+ll++k+++l+kl++ ++ +++ +e+  ++l+  e+  ++ l+k+    ++ ++++++++ +++  ++++k+++    ++ ++ l++ ++
    EPX71194.1  30 FLQDERKQLLNNKNEHLKKLSNVYE-NQKNIEKTLDHLQAREQTYNELLEKErveREATEQEIQTIQGKVE-AMQKRKQTVldeiERSRAVLTTKQQ 124
                   2333334444555555555543331.222222222222222222222111111112333333333333332.2222222222211222222223444 PP

  Exonuc_VII_L 245 kkerleeleekleals 260
                   +ke+le+ ++k e+l+
    EPX71194.1 125 TKEELESSKRKQEQLN 140
                   4444555444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (235 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3282  (0.183055); expected 358.6 (0.02)
Passed bias filter:                      751  (0.0418874); expected 358.6 (0.02)
Passed Vit filter:                       107  (0.00596798); expected 17.9 (0.001)
Passed Fwd filter:                        25  (0.00139439); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.62u 0.28s 00:00:00.90 Elapsed: 00:00:00.41
# Mc/sec: 1715.02
//
Query:       EPX71195.1  [L=795]
Description: hypothetical protein SOCG_01413 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
        1.6    8.8   8.5        6.9    6.7   8.5    2.1  1  Tox-GHH        GHH signature containing HNH/Endo VII superfam


Domain annotation for each model (and alignments):
>> Tox-GHH  GHH signature containing HNH/Endo VII superfamily nuclease toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   8.5   0.00038       6.9       1      32 [.     493     524 ..     493     535 .. 0.89

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.00038
     Tox-GHH   1 kErkrllehakkravreaWkrErqllregeeg 32 
                 +E++r++ +a+++av+++ ++E ql+++ e+ 
  EPX71195.1 493 EEQQRVMSEARQKAVERRRQEEEQLTQSRERA 524
                 69***********************9998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (795 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1905  (0.106252); expected 358.6 (0.02)
Passed bias filter:                      502  (0.0279993); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.80u 0.31s 00:00:01.11 Elapsed: 00:00:00.47
# Mc/sec: 5032.20
//
Query:       EPX71196.1  [L=95]
Description: F0-ATPase subunit F [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.6e-32  110.7   0.3    4.2e-32  110.5   0.3    1.0  1  F1F0-ATPsyn_F  Mitochondrial F1-F0 ATP synthase subunit F of 


Domain annotation for each model (and alignments):
>> F1F0-ATPsyn_F  Mitochondrial F1-F0 ATP synthase subunit F of fungi
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.5   0.3   2.3e-36   4.2e-32       5      92 .]       5      91 ..       2      91 .. 0.98

  Alignments for each domain:
  == domain 1  score: 110.5 bits;  conditional E-value: 2.3e-36
  F1F0-ATPsyn_F  5 alstlipPkiaspkalgaaknaarlervvsfYkkLPkGpapkakakgllgrykakyfdgknasgkPllhlilgllllgYsieYyfHLr 92
                   +l+ +ipP++a+p+al+a +++ar+ r+v+fY +LPkG+apk++++g++++y+aky+ gknasg+Pllhl++++++++Y+ eY +H+r
     EPX71196.1  5 SLKPFIPPQVANPTALNAFPSSARMGRIVDFYTRLPKGSAPKKSSNGFFNWYYAKYL-GKNASGAPLLHLVGAIFIFSYASEYFYHIR 91
                   57889****************************************************.****************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       281  (0.0156729); expected 358.6 (0.02)
Passed bias filter:                      231  (0.0128842); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 707.54
//
Query:       EPX71197.1  [L=138]
Description: mediator complex subunit Srb7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-28   99.4   5.8    2.7e-28   99.0   5.8    1.2  1  Med21     Subunit 21 of Mediator complex
    1.5e-05   24.6   0.7    1.6e-05   24.4   0.7    1.0  1  Beach     Beige/BEACH domain
    1.9e-05   24.7   2.9    1.9e-05   24.7   2.9    1.9  2  Med9      RNA polymerase II transcription mediator complex su
     0.0058   16.7   2.2     0.0083   16.2   2.2    1.2  1  MCU       Mitochondrial calcium uniporter
  ------ inclusion threshold ------
      0.019   15.6   0.6      0.019   15.6   0.6    1.9  3  DUF4404   Domain of unknown function (DUF4404)
      0.019   15.2   5.1      0.026   14.8   5.1    1.3  1  THOC7     Tho complex subunit 7
      0.029   14.8   5.3      0.043   14.3   4.8    1.5  2  Fez1      Fez1
      0.038   12.6   4.6      0.045   12.4   4.6    1.0  1  FapA      Flagellar Assembly Protein A
      0.044   13.0   7.3      0.059   12.6   7.3    1.1  1  HAP1_N    HAP1 N-terminal conserved region
       0.19   11.6   3.0       0.61    9.9   3.0    1.8  1  DivIC     Septum formation initiator
       0.83    8.8   4.1        1.3    8.2   4.1    1.3  1  TMPIT     TMPIT-like protein


Domain annotation for each model (and alignments):
>> Med21  Subunit 21 of Mediator complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.0   5.8   1.7e-31   2.7e-28       5     141 ..       4     126 ..       1     129 [. 0.92

  Alignments for each domain:
  == domain 1  score: 99.0 bits;  conditional E-value: 1.7e-31
       Med21   5 LTqLQdcldqLaeqfyatlgylntshdpsplseqdpsspsaapalakipqeekeepepdspeefaatqrelardlilkeqqIeyLIssLPgigsseeeq 103
                  TqLQd++d++++qfy++++yl+ +hd++pl++q++ s              +++ +p s+ee++  q+ +a+dli+k qqI++LI++LPgi++ +++q
  EPX71197.1   4 CTQLQDTIDEVTTQFYSSIHYLSSQHDFVPLPGQEKAS--------------DTKLNPISEEELKFVQKDMAKDLITKFQQIDTLIQQLPGISTAPKHQ 88 
                 7*******************************888821..............223457789************************************** PP

       Med21 104 eerikeLeeelreveeereekvkekeellkkveellra 141
                 +e+ik+ ++ +++ ++ere+   e+e+l + + e +++
  EPX71197.1  89 MEKIKSYQQSIEKKKKEREQCEAENERLKASLAERIET 126
                 ********************************999986 PP

>> Beach  Beige/BEACH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.7   9.9e-09   1.6e-05     136     271 ..       3     137 ..       1     138 [] 0.83

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 9.9e-09
       Beach 136 svtesesdvkEliPeffylpefllnsnnldlglkqeekvddVeLPpwakkspeeFvrihr.eaLeseyvsenLheWIDliFGykqrgeeavkaknvfhp 233
                  +t+ + ++ E++ +f+   + l +++++ + l  +ek +d +L p + +++ +Fv++ + + L  +   +++ + I    G+    ++ +++   +++
  EPX71197.1   3 CCTQLQDTIDEVTTQFYSSIHYLSSQHDF-VPLPGQEKASDTKLNPIS-EEELKFVQKDMaKDLITK--FQQIDTLIQQLPGISTAPKHQMEKIKSYQQ 97 
                 567788999*****************999.44343469**********.8999***98541445555..699*************************** PP

       Beach 234 ltyegevdlekie..deeekkaieaqikefGqtPkqlfkk 271
                  + +++ + e++e  +e+ k+++ + i++fGq++ +lf++
  EPX71197.1  98 SIEKKKKEREQCEaeNERLKASLAERIETFGQVTCELFQS 137
                 *9999887777662255667999***************85 PP

>> Med9  RNA polymerase II transcription mediator complex subunit 9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   2.9   1.2e-08   1.9e-05      28      71 ..      61     104 ..      39     108 .. 0.91
   2 ?   -0.6   0.1      0.87   1.4e+03      58      74 ..     105     121 ..     103     127 .. 0.65

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 1.2e-08
        Med9  28 tgelrhkLkkarelirelpgidrsveeqeaeieeleeqlakKre 71 
                 + +l +k++++ +li++lpgi+  ++ q ++i++++++++kK++
  EPX71197.1  61 AKDLITKFQQIDTLIQQLPGISTAPKHQMEKIKSYQQSIEKKKK 104
                 567789************************************96 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.87
        Med9  58 eieeleeqlakKrelLk 74 
                 e e+ e ++++ ++ L+
  EPX71197.1 105 EREQCEAENERLKASLA 121
                 55666777777666665 PP

>> MCU  Mitochondrial calcium uniporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   2.2   5.1e-06    0.0083       6      88 ..      43     124 ..      37     135 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 5.1e-06
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-SSSSSSTSSSSSHHHHHHHHHHHHH-SHHHHHHHHTCCCGGGCH CS
         MCU   6 eaaavlsesgvvialstlleeeeakvllrvkqlvkalesalnveeeqlkkereleekleelreelepleekkeeidekAerrt 88 
                 + ++ +se++ + + ++ + ++  ++++++++l+++l  + +++++q++k ++ ++++e+ ++e e++e+++e+++++ ++r 
  EPX71197.1  43 TKLNPISEEELKFVQKD-MAKDLITKFQQIDTLIQQLPGISTAPKHQMEKIKSYQQSIEKKKKEREQCEAENERLKASLAERI 124
                 55666788888888899.666779**********************************************9999987655554 PP

>> DUF4404  Domain of unknown function (DUF4404)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       7.2   1.2e+04      49      59 ..       7      17 ..       5      21 .. 0.50
   2 ?   -2.1   0.1       3.9   6.3e+03      16      35 ..      43      62 ..      38      67 .. 0.69
   3 ?   15.6   0.6   1.2e-05     0.019       3      60 ..      69     127 ..      68     132 .. 0.91

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 7.2
     DUF4404 49 laerlneaver 59
                l++++ e +++
  EPX71197.1  7 LQDTIDEVTTQ 17
                44444444444 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 3.9
     DUF4404 16 esldeetralLeslaediee 35
                ++l++ ++++L+ +++d+ +
  EPX71197.1 43 TKLNPISEEELKFVQKDMAK 62
                55666677778877777765 PP

  == domain 3  score: 15.6 bits;  conditional E-value: 1.2e-05
     DUF4404   3 elLekLheeLeqnesldeetralLeslaedieellaeedaaaeeee.laerlneaverF 60 
                 +++++L ++L   +++ + + ++++s ++ ie+  +e ++ ++e+e l+  l e +e+F
  EPX71197.1  69 QQIDTLIQQLPGISTAPKHQMEKIKSYQQSIEKKKKEREQCEAENErLKASLAERIETF 127
                 68999*****************************9999999988888999999999988 PP

>> THOC7  Tho complex subunit 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   5.1   1.6e-05     0.026      33     110 ..      52     125 ..       4     126 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.6e-05
       THOC7  33 steeeleqlkedllldfaafelsierlqllakanerereryeaekeeieseieavreeieelkaqLeearatranrke 110
                 + +  ++ + +dl ++f + ++ i++l  +++a + ++e+++      +++ie+ ++e e+++a++e+ +a +a r e
  EPX71197.1  52 ELKFVQKDMAKDLITKFQQIDTLIQQLPGISTAPKHQMEKIK----SYQQSIEKKKKEREQCEAENERLKASLAERIE 125
                 444456678899*****************************9....67789999999999999999999999998876 PP

>> Fez1  Fez1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       2.8   4.5e+03      17      31 ..       5      19 ..       4      33 .. 0.73
   2 ?   14.3   4.8   2.7e-05     0.043      16      93 ..      54     131 ..      48     137 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 2.8
        Fez1 17 qQLkdsqaevtqkls 31
                +QL+d+  evt++  
  EPX71197.1  5 TQLQDTIDEVTTQFY 19
                589999999888754 PP

  == domain 2  score: 14.3 bits;  conditional E-value: 2.7e-05
        Fez1  16 KqQLkdsqaevtqklseivalkaqlrelrakleekeeeikeleesleektlelevcenelqrkkseaellrekvekle 93 
                 K   kd+ +++ +k + i +l  ql  ++++ +++ e+ik++++s+e+k++e e+ce+e +r k++     e+ +++ 
  EPX71197.1  54 KFVQKDMAKDLITKFQQIDTLIQQLPGISTAPKHQMEKIKSYQQSIEKKKKEREQCEAENERLKASLAERIETFGQVT 131
                 55569999******************************************************9987666666565555 PP

>> FapA  Flagellar Assembly Protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   4.6   2.8e-05     0.045     346     410 ..      61     126 ..      35     135 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 2.8e-05
        FapA 346 leeleeeleklkkkikklpklkaekqlesekkeqlkklletkeklkeeleeleeelk.elkeeles 410
                  ++l  + ++++  i++lp ++  ++ ++ek +++++ +e+k+k +e+ e+ +e+lk +l e++e+
  EPX71197.1  61 AKDLITKFQQIDTLIQQLPGISTAPKHQMEKIKSYQQSIEKKKKEREQCEAENERLKaSLAERIET 126
                 23336666666666******9999999***************999999999999999899998876 PP

>> HAP1_N  HAP1 N-terminal conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   7.3   3.6e-05     0.059     197     281 ..      49     134 ..      37     137 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 3.6e-05
      HAP1_N 197 EekEqqLv.ldcveqlseanqqiaelseelarkleelerqqeeissLlaqivdlqqklkelgveneelkqhLaaskeaqrqLtaEL 281
                  e+E + v +d++++l +  qqi++l ++l   +   ++q e+i+s +  i + ++  +++ +ene lk+ La   e+  q+t EL
  EPX71197.1  49 SEEELKFVqKDMAKDLITKFQQIDTLIQQLPGISTAPKHQMEKIKSYQQSIEKKKKEREQCEAENERLKASLAERIETFGQVTCEL 134
                 46666666369***************************************************************999999999998 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   3.0   0.00038      0.61      22      52 ..      88     118 ..      82     126 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00038
                 HHHHHHHHHHHHHHHHHHHHHHHHHHCC-XX CS
       DivIC  22 lkqeiaalqaelaklkaeneeLeaevkdLks 52 
                 + ++i+  q+ ++k+k+e+e+ eae ++Lk 
  EPX71197.1  88 QMEKIKSYQQSIEKKKKEREQCEAENERLKA 118
                 5567888888888888888888888888863 PP

>> TMPIT  TMPIT-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   4.1   0.00077       1.3      14      85 ..      60     130 ..      47     137 .. 0.66

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00077
       TMPIT  14 leetakeykqkleelsklqskcskeikkqkkrlkelksslkklkksvkeeeeeeveelkeelkerkkvlkev 85 
                 + +   +  q++++l ++   +s++ k+q +++k+ ++s++k kk+ +e+ e e e+lk++l+er +++ +v
  EPX71197.1  60 MAKDLITKFQQIDTLIQQLPGISTAPKHQMEKIKSYQQSIEKKKKE-REQCEAENERLKASLAERIETFGQV 130
                 3333334446666666777778888889999999999999888877.4566667777888877777666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2243  (0.125105); expected 358.6 (0.02)
Passed bias filter:                      828  (0.0461822); expected 358.6 (0.02)
Passed Vit filter:                        93  (0.00518713); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.47u 0.29s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 936.06
//
Query:       EPX71198.1  [L=261]
Description: exoribonuclease Rex4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.3e-16   60.8   0.0    4.7e-16   59.8   0.0    1.5  1  RNase_T         Exonuclease
    2.4e-05   24.1   0.0    0.00015   21.5   0.0    2.2  1  DNA_pol_A_exo1  3'-5' exonuclease


Domain annotation for each model (and alignments):
>> RNase_T  Exonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.8   0.0   5.2e-20   4.7e-16       1     165 []      95     243 ..      95     243 .. 0.91

  Alignments for each domain:
  == domain 1  score: 59.8 bits;  conditional E-value: 5.2e-20
                 EEEEEEESSSTTCTTS-EEEEEEEEEETTCCEEEEEEEEEEEHSSHCSSSHHHHHHHHHCHHHHHTCEBHHHHHHHHHHHHHHHTCCCETTTCEEEESS CS
     RNase_T   1 vviDlEttgldakekdeiieiaaisidggeneigetfhfyvkptelakltdecteftgitqemldeapsfkevleefkellrklallvahnaafdvgfl 99 
                 +++D+E++g+       +  +a++si+++   +   +++yv+p+e   +td+ t ++g    + ++ap f++v +e++++l+ +        +++vg++
  EPX71198.1  95 IAMDCEMVGVAD----DMSVLARVSIVNYH--GRVVYDTYVRPKER--VTDWRTWVSGVKSFHMRDAPPFEKVQKEVADVLE-N--------RVLVGHA 176
                 679******996....6999*********9..78889*********..**********************************.4........7777788 PP

                 HHHHHHHHHHHHHHHHHCSEHCECHHHHHHHHHC...HHHHHHHHHTTCHSSSS.TSSHHHHHHHHHHHH CS
     RNase_T 100 raadkrilkkevpkrnqfldtlildkatlkelar...tsldklaeklgleedgr.aHrAldDaeataklf 165
                  ++d ++l + +p r  + dt ++  + +++la+    sl+klae+++   +++ +H++++Da+at+ l+
  EPX71198.1 177 IQNDLKVLLLSHP-RRLIRDTSRF--SGFRKLAKgktPSLKKLAEQVLGRDIQSgQHSSVQDAQATMDLY 243
                 9999999889888.8889999998..666666667779****************************9987 PP

>> DNA_pol_A_exo1  3'-5' exonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   1.7e-08   0.00015      21     144 ..      93     237 ..      81     250 .. 0.77

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 1.7e-08
                     SEEEEEEEEE-SSSTTSSEEEEEEEEECSSEEEEEECTTTTTT-........................HGHHHHHHHT-TTSEEEESSHHHHHHH CS
  DNA_pol_A_exo1  21 kvvavDtEttsldlisatlvliliqlgekeeayiidplelgddv........................alealkrlledenitkvghnakfDlev 91 
                     k++a+D+E  ++    + +vl+ +++ ++ + ++ d++  +++                         +++ ++ +le++    vgh++++Dl+v
      EPX71198.1  93 KYIAMDCEMVGVAD--DMSVLARVSIVNYHGRVVYDTYVRPKERvtdwrtwvsgvksfhmrdappfekVQKEVADVLENR--VLVGHAIQNDLKV 183
                     38999999999888..9999999999999777777776655554567789999999999999999999**********75..9************ PP

                     HHHHHTS--SSEEEH.HHHH.HHTTHSTTSSHHHHHHHHHS.B---GHCCTTSSTT CS
  DNA_pol_A_exo1  92 lardfgielenlfdt.mlaa.yvldyershsLdsLaekylg.dleldkeeqiakwq 144
                     l     +  + + dt +++  + l++ ++ sL++Lae++lg d++  + + +++ q
      EPX71198.1 184 LLL--SHPRRLIRDTsRFSGfRKLAKGKTPSLKKLAEQVLGrDIQSGQHSSVQDAQ 237
                     **9..666677778865554367777777************666665555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1080  (0.0602376); expected 358.6 (0.02)
Passed bias filter:                      630  (0.0351386); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 1755.12
//
Query:       EPX71199.1  [L=539]
Description: importin alpha [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-89  292.0  16.8    4.1e-12   45.7   0.1    8.5  8  Arm           Armadillo/beta-catenin-like repeat
    8.6e-23   80.6   6.8    1.1e-21   77.0   7.6    2.4  3  IBB           Importin beta binding domain
    1.9e-20   72.1   4.1    1.2e-19   69.5   0.8    2.6  2  Arm_3         Atypical Arm repeat
    1.8e-19   69.8   0.3    7.9e-07   29.5   0.0    6.0  6  HEAT_EZ       HEAT-like repeat
      1e-16   61.1   0.0      1e-05   25.8   0.0    5.4  6  HEAT_2        HEAT repeats
    1.3e-16   59.2   0.3    0.00045   20.2   0.0    8.0  8  HEAT          HEAT repeat
    2.7e-07   29.5   0.0    6.7e-05   21.6   0.0    3.3  2  Adaptin_N     Adaptin N terminal region
      1e-06   28.8   0.1       0.64   10.1   0.0    4.6  6  V-ATPase_H_C  V-ATPase subunit H
    0.00023   21.2   0.0      0.065   13.3   0.0    3.4  3  Cnd1          non-SMC mitotic condensation complex subunit 1
      0.002   17.6   0.2      0.018   14.4   0.0    2.3  2  Mo25          Mo25-like
     0.0028   17.8   2.3        7.7    6.8   0.0    4.6  4  RICTOR_V      Rapamycin-insensitive companion of mTOR, domain
     0.0065   16.0   0.0       0.49    9.8   0.0    2.9  2  Arm_2         Armadillo-like
  ------ inclusion threshold ------
      0.031   14.0   0.0       0.11   12.1   0.0    1.9  1  DCB           Dimerisation and cyclophilin-binding domain of 
      0.053   14.2   0.1         21    6.2   0.0    3.9  3  HEAT_PBS      PBS lyase HEAT-like repeat


Domain annotation for each model (and alignments):
>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.0   0.0   9.4e-14   1.2e-10       2      41 .]     110     149 ..     109     149 .. 0.96
   2 !   44.7   0.0   6.5e-15   8.3e-12       2      40 ..     152     190 ..     151     191 .. 0.96
   3 !   38.3   0.1   6.6e-13   8.4e-10       1      41 []     193     235 ..     193     235 .. 0.97
   4 !   28.4   0.1   8.8e-10   1.1e-06      13      41 .]     249     277 ..     239     277 .. 0.89
   5 !   29.6   0.1   3.6e-10   4.6e-07       2      40 ..     280     318 ..     279     319 .. 0.95
   6 !   38.0   0.1   8.3e-13   1.1e-09       2      41 .]     322     361 ..     321     361 .. 0.96
   7 !   45.7   0.1   3.2e-15   4.1e-12       3      40 ..     365     402 ..     363     403 .. 0.94
   8 !   31.2   0.0   1.2e-10   1.5e-07       2      39 ..     409     446 ..     408     448 .. 0.96

  Alignments for each domain:
  == domain 1  score: 41.0 bits;  conditional E-value: 9.4e-14
                 HHHHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHTT CS
         Arm   2 senkdavieaGavppLvrLLssedeevqeeAawALsNLaa 41 
                 ++++d vi +G+v+++v++L+se+  +q+eAawAL+N+a+
  EPX71199.1 110 NPPIDRVIACGVVDRFVQFLESEHNLLQFEAAWALTNIAS 149
                 899***********************************96 PP

  == domain 2  score: 44.7 bits;  conditional E-value: 6.5e-15
                 HHHHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm   2 senkdavieaGavppLvrLLssedeevqeeAawALsNLa 40 
                  +++++v+++Gavp++++LLss+  +v+e+++wAL+N+a
  EPX71199.1 152 TDQTRVVVNSGAVPRFIHLLSSPEKDVREQVVWALGNIA 190
                 6899**********************************8 PP

  == domain 3  score: 38.3 bits;  conditional E-value: 6.6e-13
                 SHHHHHHHHHTTHHHHHHHHTT..TSSHHHHHHHHHHHHHHTT CS
         Arm   1 nsenkdavieaGavppLvrLLs..sedeevqeeAawALsNLaa 41 
                 +s ++d+v ++G+++pL+  ++  + d +++++A+w+LsNL++
  EPX71199.1 193 SSACRDYVLSCGCLEPLLYIIEtsTADLSMLRNATWTLSNLCR 235
                 5789**************************************7 PP

  == domain 4  score: 28.4 bits;  conditional E-value: 8.8e-10
                 HHHHHHHHTTTSSHHHHHHHHHHHHHHTT CS
         Arm  13 avppLvrLLssedeevqeeAawALsNLaa 41 
                 a+p L +LL+s+d+ev+ +A+wA+s+L++
  EPX71199.1 249 ALPTLAKLLYSDDVEVVVDACWAISYLSD 277
                 59*************************95 PP

  == domain 5  score: 29.6 bits;  conditional E-value: 3.6e-10
                 HHHHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm   2 senkdavieaGavppLvrLLssedeevqeeAawALsNLa 40 
                 +e + a+i+ G+ p+Lv+LL+s ++++q++A++ ++N+ 
  EPX71199.1 280 NEKIGAIIDVGCAPRLVDLLNSSSPNIQTPALRSVGNIV 318
                 78899********************************96 PP

  == domain 6  score: 38.0 bits;  conditional E-value: 8.3e-13
                 HHHHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHTT CS
         Arm   2 senkdavieaGavppLvrLLssedeevqeeAawALsNLaa 41 
                 + +++ +ie+Ga+ ++ +LL + +e++++e +w++sN++a
  EPX71199.1 322 DAQTQIIIECGALNAFPNLLCHHKENIRKETCWTISNITA 361
                 679***********************************96 PP

  == domain 7  score: 45.7 bits;  conditional E-value: 3.2e-15
                 HHHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm   3 enkdavieaGavppLvrLLssedeevqeeAawALsNLa 40 
                 ++++avie++ ++pLv+LL++ d ++++eA+wA+sN +
  EPX71199.1 365 QQIQAVIESNLIQPLVHLLKNADYKTKKEACWAISNAT 402
                 79**********************************76 PP

  == domain 8  score: 31.2 bits;  conditional E-value: 1.2e-10
                 HHHHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHH CS
         Arm   2 senkdavieaGavppLvrLLssedeevqeeAawALsNL 39 
                 +e++++++++G+++pL+++L+  d +++++A+ A+ N+
  EPX71199.1 409 PEQIRYLVKQGVIKPLCDMLEGSDNKIVQVALDAIENI 446
                 89***********************************9 PP

>> IBB  Importin beta binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.0   7.6   8.8e-25   1.1e-21       1      90 []       9      99 ..       9      99 .. 0.86
   2 ?   -1.7   0.0       3.1     4e+03      68      88 ..     248     268 ..     240     269 .. 0.84
   3 ?   -3.1   0.0       8.5   1.1e+04      71      88 ..     293     310 ..     292     311 .. 0.85

  Alignments for each domain:
  == domain 1  score: 77.0 bits;  conditional E-value: 8.8e-25
                XXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...........XXXXXXXXXXXX-----TT--------HHHHH CS
         IBB  1 RlksfKnkgk.daeelRrrReeeqvelRKqkreeqllKrRnvaaeaaaeeeadseeeeeessaeekkleeleemvqgvnSddpelqleatq 90
                R+++fK k+  +a+elRr+Ree+qve+RKqkree+l+KrRn+++  ++e++++ e+e  +  ++ + ++e++++ + v+S+++elql+a++
  EPX71199.1  9 RRSRFKGKAVfKADELRRQREEQQVEIRKQKREESLNKRRNLNSVLQNETSENMENEPVRGFMDGQMDDEFPKLTADVMSNNIELQLNAVT 99
                99****************************************77444444333444435678899************************86 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 3.1
                 XXX-----TT--------HHH CS
         IBB  68 eeleemvqgvnSddpelqlea 88 
                   l+ + + ++Sdd+e+ ++a
  EPX71199.1 248 VALPTLAKLLYSDDVEVVVDA 268
                 678999999*******99887 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 8.5
                 -----TT--------HHH CS
         IBB  71 eemvqgvnSddpelqlea 88 
                 +++v  +nS++p+ q+ a
  EPX71199.1 293 PRLVDLLNSSSPNIQTPA 310
                 6789999******99876 PP

>> Arm_3  Atypical Arm repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.1     0.068        87       4      27 ..     325     348 ..     323     352 .. 0.89
   2 !   69.5   0.8   9.7e-23   1.2e-19       3      52 ..     464     511 ..     462     513 .. 0.86

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.068
       Arm_3   4 alliEeagGldkIeaLQnheneeI 27 
                 ++ i e+g+l    +L  h  e+I
  EPX71199.1 325 TQIIIECGALNAFPNLLCHHKENI 348
                 57899****************999 PP

  == domain 2  score: 69.5 bits;  conditional E-value: 9.7e-23
       Arm_3   3 yalliEeagGldkIeaLQnheneeIYkkAlkIiekYFseeeeeddeelap 52 
                  a +iEeagG+dkI +LQ++ n++IY kA++IiekYFs+e+    e lap
  EPX71199.1 464 CAVYIEEAGGMDKIYELQTSGNNDIYLKAYNIIEKYFSDEDG--VEDLAP 511
                 5799************************************54..444445 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.5   0.0   6.2e-10   7.9e-07       3      55 .]     136     189 ..     134     189 .. 0.88
   2 !   18.6   0.0   1.6e-06     0.002       5      55 .]     224     275 ..     221     275 .. 0.89
   3 ?    3.0   0.0      0.12   1.5e+02      31      55 .]     293     317 ..     291     317 .. 0.91
   4 ?    5.1   0.0     0.027        34      35      55 .]     339     359 ..     333     359 .. 0.88
   5 !    9.9   0.0   0.00084       1.1       3      54 ..     348     400 ..     346     401 .. 0.80
   6 ?    3.2   0.0      0.11   1.4e+02       5      42 ..     392     433 ..     390     446 .. 0.57

  Alignments for each domain:
  == domain 1  score: 29.5 bits;  conditional E-value: 6.2e-10
     HEAT_EZ   3 vRraAawaLGrlaggepellqp.lvpeilpaLlalLnddsdeVRaaAagaLgnl 55 
                 +++ AawaL ++a+g  ++ +  + + ++p ++ lL++++++VR+++++aLgn+
  EPX71199.1 136 LQFEAAWALTNIASGTTDQTRVvVNSGAVPRFIHLLSSPEKDVREQVVWALGNI 189
                 799******9999898888666344789999999999***************98 PP

  == domain 2  score: 18.6 bits;  conditional E-value: 1.6e-06
     HEAT_EZ   5 raAawaLGr.laggepellqplvpeilpaLlalLnddsdeVRaaAagaLgnl 55 
                 r+A w+L++ + g +p+     ++++lp L++lL +d+ eV   A++a++ l
  EPX71199.1 224 RNATWTLSNlCRGKNPPPNWSTISVALPTLAKLLYSDDVEVVVDACWAISYL 275
                 8999***9977777777777799**************************975 PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.12
     HEAT_EZ  31 paLlalLnddsdeVRaaAagaLgnl 55 
                 p L+ lLn++s+++++ A++  gn+
  EPX71199.1 293 PRLVDLLNSSSPNIQTPALRSVGNI 317
                 89*************9999998886 PP

  == domain 4  score: 5.1 bits;  conditional E-value: 0.027
     HEAT_EZ  35 alLnddsdeVRaaAagaLgnl 55 
                 +lL++ + ++R+ ++++++n+
  EPX71199.1 339 NLLCHHKENIRKETCWTISNI 359
                 68888888***********97 PP

  == domain 5  score: 9.9 bits;  conditional E-value: 0.00084
     HEAT_EZ   3 vRraAawaLGrlaggepellqp.lvpeilpaLlalLnddsdeVRaaAagaLgn 54 
                 +R   +w+++++ +g+ +++q    + ++ +L+ lL++ + ++++ A++a++n
  EPX71199.1 348 IRKETCWTISNITAGNIQQIQAvIESNLIQPLVHLLKNADYKTKKEACWAISN 400
                 789999****955555555555599***********5544499********98 PP

  == domain 6  score: 3.2 bits;  conditional E-value: 0.11
     HEAT_EZ   5 raAawaLGr.....laggepellqp.lvpeilpaLlalLnddsd 42 
                   A+wa+++     l    pe+++  + + ++++L+ +L+ ++ 
  EPX71199.1 392 KEACWAISNatsggLG--QPEQIRYlVKQGVIKPLCDMLEGSDN 433
                 5688999775544333..33333334667777777777744443 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0    0.0026       3.3      32      60 ..     121     149 ..      88     160 .. 0.80
   2 !   25.8   0.0   8.2e-09     1e-05       2      63 ..     123     195 ..     122     198 .. 0.85
   3 !    6.7   0.0    0.0075       9.7       3      58 ..     208     275 ..     206     289 .. 0.66
   4 !   11.7   0.0   0.00021      0.27       2      66 ..     251     327 ..     250     333 .. 0.79
   5 !   11.1   0.0    0.0003      0.39       2      59 ..     293     360 ..     292     375 .. 0.78
   6 !    9.1   0.0    0.0013       1.6       2      54 ..     377     442 ..     376     455 .. 0.62

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0026
      HEAT_2  32 alpaLvellededpavRraaaeaLgaigd 60 
                 +++ +v++le+e+   + +aa+aL  i++
  EPX71199.1 121 VVDRFVQFLESEHNLLQFEAAWALTNIAS 149
                 58999*******************99864 PP

  == domain 2  score: 25.8 bits;  conditional E-value: 8.2e-09
      HEAT_2   2 daLlqalendpdpevrraairaLgrignp...........ealpaLvellededpavRraaaeaLgai.gdpea 63 
                 d ++q+l ++++  ++ +a++aL +i++             a+p ++ ll++++ +vR+++++aLg i gd++a
  EPX71199.1 123 DRFVQFL-ESEHNLLQFEAAWALTNIASGttdqtrvvvnsGAVPRFIHLLSSPEKDVREQVVWALGNIaGDSSA 195
                 67899**.89**************888765566777777777************************99445555 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.0075
      HEAT_2   3 aLlqalen.dpdpevrraairaLg...rignp........ealpaLvellededpavRraaaeaLgai 58 
                 +Ll ++e+  +d    r+a ++L    r +np         alp+L +ll ++d +v   a++a++ +
  EPX71199.1 208 PLLYIIETsTADLSMLRNATWTLSnlcRGKNPppnwstisVALPTLAKLLYSDDVEVVVDACWAISYL 275
                 56666654344445667777777754422333466666656799999999999999999999988766 PP

  == domain 4  score: 11.7 bits;  conditional E-value: 0.00021
      HEAT_2   2 daLlqalendpdpevrraairaLgrignp...........ealpaLvellededpavRraaaeaLgai..gdpealpa 66 
                 ++L ++l  + d ev   a++a+  + +             + p Lv+ll++++p+++  a ++ g i  g+++  ++
  EPX71199.1 251 PTLAKLL-YSDDVEVVVDACWAISYLSDGpnekigaiidvGCAPRLVDLLNSSSPNIQTPALRSVGNIvtGTDAQTQI 327
                 7788888.899999*9********665433556666665566************************996666666655 PP

  == domain 5  score: 11.1 bits;  conditional E-value: 0.0003
      HEAT_2   2 daLlqalendpdpevrraairaLgrignp...........ealpaLvellededpavRraaaeaLgaig 59 
                 + L+ +l n+++p+++  a+r+ g+i +             al+a+ +ll ++++++R++ +++++ i 
  EPX71199.1 293 PRLVDLL-NSSSPNIQTPALRSVGNIVTGtdaqtqiiiecGALNAFPNLLCHHKENIRKETCWTISNIT 360
                 6789999.9***************553322244557777788**********************99883 PP

  == domain 6  score: 9.1 bits;  conditional E-value: 0.0013
      HEAT_2   2 daLlqalendpdpevrraairaLg.....rignp.........ealpaLvellededpavRraaaea 54 
                 ++L+ +l + +d++++++a++a+       +g p          +++ L ++le +d  + + a +a
  EPX71199.1 377 QPLVHLL-KNADYKTKKEACWAISnatsgGLGQPeqirylvkqGVIKPLCDMLEGSDNKIVQVALDA 442
                 6788888.88888888888888887777744444222222322446666666665555555555555 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0      0.04        51       3      30 ..     123     150 ..     121     151 .. 0.86
   2 !   20.2   0.0   3.5e-07   0.00045       2      28 ..     164     190 ..     163     192 .. 0.95
   3 ?   -1.3   0.0       2.9   3.7e+03      19      29 ..     225     235 ..     224     236 .. 0.86
   4 ?    5.7   0.0     0.017        22       2      25 ..     250     273 ..     249     278 .. 0.75
   5 !    6.6   0.0    0.0082        11       3      29 ..     293     319 ..     292     321 .. 0.93
   6 ?    4.6   0.0     0.037        47       4      28 ..     336     360 ..     333     362 .. 0.85
   7 ?    2.7   0.0      0.15   1.9e+02       1      26 [.     375     400 ..     375     404 .. 0.89
   8 ?    3.5   0.0     0.084   1.1e+02       2      30 ..     421     449 ..     420     450 .. 0.90

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.04
                 HHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   3 PlllkllsDpspeVReaAakaLgalaev 30 
                 + +++ l++++      Aa+aL+++a++
  EPX71199.1 123 DRFVQFLESEHNLLQFEAAWALTNIASG 150
                 67888899999999999*********86 PP

  == domain 2  score: 20.2 bits;  conditional E-value: 3.5e-07
                 HHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgala 28 
                 +P +++lls+p+ +VRe +++aLg++a
  EPX71199.1 164 VPRFIHLLSSPEKDVREQVVWALGNIA 190
                 799**********************98 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 2.9
                 HHHHHHHHHHH CS
        HEAT  19 aAakaLgalae 29 
                 +A ++L +l++
  EPX71199.1 225 NATWTLSNLCR 235
                 799******97 PP

  == domain 4  score: 5.7 bits;  conditional E-value: 0.017
                 HHHHHHHHT-SSHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLg 25 
                 lP+l kll +++ eV   A++a+ 
  EPX71199.1 250 LPTLAKLLYSDDVEVVVDACWAIS 273
                 8*******7777777777777765 PP

  == domain 5  score: 6.6 bits;  conditional E-value: 0.0082
                 HHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   3 PlllkllsDpspeVReaAakaLgalae 29 
                 P l+ ll+++sp++   A++++g+++ 
  EPX71199.1 293 PRLVDLLNSSSPNIQTPALRSVGNIVT 319
                 899*********************986 PP

  == domain 6  score: 4.6 bits;  conditional E-value: 0.037
                 HHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAakaLgala 28 
                 ++ +ll++   ++R+ +++++ ++ 
  EPX71199.1 336 AFPNLLCHHKENIRKETCWTISNIT 360
                 556789***************9996 PP

  == domain 7  score: 2.7 bits;  conditional E-value: 0.15
                 HHHHHHHHHT-SSHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLga 26 
                 l+ +l++ll+  + +  + A++a+ +
  EPX71199.1 375 LIQPLVHLLKNADYKTKKEACWAISN 400
                 67899******************986 PP

  == domain 8  score: 3.5 bits;  conditional E-value: 0.084
                 HHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgalaev 30 
                 + +l+ +l+ ++ ++ + A+ a+ ++++v
  EPX71199.1 421 IKPLCDMLEGSDNKIVQVALDAIENILKV 449
                 5679999999***************9986 PP

>> Adaptin_N  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   5.2e-08   6.7e-05     118     298 ..     124     321 ..      72     404 .. 0.82
   2 ?    3.2   0.1     0.021        27     265     297 ..     417     449 ..     362     469 .. 0.64

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 5.2e-08
                 HHHHHHT-SSHHHHHHHHHHHHHCCCCCHHCCC...CC.HHHHHHHCTT-SSHHHHHHHHHHHHHH.....HCCCCCCC.HHHHHHHCCHHHHHHCS-H CS
   Adaptin_N 118 aikkllkdrspyvrkkAalailklykkdpdllr...kq.lveeikellsdkdpgvvlaAvalleei.....kkndrlll.kllpklvrrLcnllteldp 206
                    + l+++++ ++ +Aa a++ + + + d+ r   +   v+++++lls+ +  v   +v +l  i      + d  l+  +l+ l  +++   t++ +
  EPX71199.1 124 RFVQFLESEHNLLQFEAAWALTNIASGTTDQTRvvvNSgAVPRFIHLLSSPEKDVREQVVWALGNIagdssACRDYVLScGCLEPLLYIIE---TSTAD 219
                 445778899999999999999999999777654222556799************************6665555555555777777777777...56666 PP

                 HHHHH.HHHHHCC---SSHHHH.....HHHHHHHCGGCGCSSCHHHHHHHHHCCHCCCCST......HHHCCHHCHHHHHHSSCCTCHHHHHCHHHHHH CS
   Adaptin_N 207 wlqvk.iiklltrlarqepeersk...kellesllnllqssnnaVlletvnlivelapkne......livlavnaLvrllsskdenlryvaLrtllkiv 295
                 +  ++    +l++l+r + + ++    +  l++l +ll+s    V+  ++ +i +l++ ++      + v ++ +Lv+ll s+ +n++  aLr+   iv
  EPX71199.1 220 LSMLRnATWTLSNLCRGKNPPPNWstiSVALPTLAKLLYSDDVEVVVDACWAISYLSDGPNekigaiIDVGCAPRLVDLLNSSSPNIQTPALRSVGNIV 318
                 655541556899***9988888447888899*************************9999999999766899***********************9999 PP

                 HHX CS
   Adaptin_N 296 kke 298
                 +  
  EPX71199.1 319 TGT 321
                 865 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.021
                 HHCCHHCHHHHHHSSCCTCHHHHHCHHHHHHHH CS
   Adaptin_N 265 ivlavnaLvrllsskdenlryvaLrtllkivkk 297
                  + +++ L+++l+ +d+ +  vaL+++  i+k 
  EPX71199.1 417 KQGVIKPLCDMLEGSDNKIVQVALDAIENILKV 449
                 355789999999999999999999988877765 PP

>> V-ATPase_H_C  V-ATPase subunit H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.37   4.7e+02      41      82 ..      95     137 ..      76     155 .. 0.76
   2 ?   -0.3   0.0      0.85   1.1e+03      48     108 ..     126     185 ..     119     191 .. 0.68
   3 !   10.1   0.0    0.0005      0.64      45     114 ..     251     319 ..     245     321 .. 0.92
   4 ?   -0.5   0.0      0.97   1.2e+03      83     109 ..     372     398 ..     332     404 .. 0.62
   5 !    7.1   0.1    0.0044       5.7      39     113 ..     371     447 ..     357     449 .. 0.75
   6 !    9.2   0.1   0.00098       1.3      42     113 ..     419     500 ..     409     503 .. 0.74

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.37
  V-ATPase_H_C  41 fkllkkLiklleeskd.ktvlavalnDigelvkllpegkkvle 82 
                    + + k  k+l+++++ +   ++a+  + ++v++l++ +++l+
    EPX71199.1  95 LNAVTKFRKFLSKETNpPIDRVIACGVVDRFVQFLESEHNLLQ 137
                   4567777788876666457789999999999999988888775 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.85
  V-ATPase_H_C  48 iklleeskdktvlavalnDigelvkllpegkkvleklkaKekimellehedeevkyeALka 108
                   +++le s+++  +  a+  ++++++ + ++ +v+ + +a  + ++ll++++++v+ +   a
    EPX71199.1 126 VQFLE-SEHNLLQFEAAWALTNIASGTTDQTRVVVNSGAVPRFIHLLSSPEKDVREQVVWA 185
                   55563.4444444455566677777777778888888888889999999999999886655 PP

  == domain 3  score: 10.1 bits;  conditional E-value: 0.0005
  V-ATPase_H_C  45 kkLiklleeskdktvlavalnDigelvkllpegkkvleklkaKekimellehedeevkyeALkavqkllv 114
                    +L+kll+ s+d +v++ a+  i+ l +  +e+   + ++++  ++++ll+++ ++++  AL++v ++++
    EPX71199.1 251 PTLAKLLY-SDDVEVVVDACWAISYLSDGPNEKIGAIIDVGCAPRLVDLLNSSSPNIQTPALRSVGNIVT 319
                   57999995.888999999***********99999*******************************99875 PP

  == domain 4  score: -0.5 bits;  conditional E-value: 0.97
  V-ATPase_H_C  83 klkaKekimellehedeevkyeALkav 109
                   + +  + +++ll+++d + k+eA  a+
    EPX71199.1 372 ESNLIQPLVHLLKNADYKTKKEACWAI 398
                   334444455566666666666665555 PP

  == domain 5  score: 7.1 bits;  conditional E-value: 0.0044
  V-ATPase_H_C  39 knfkllkkLiklleeskdktvlavalnDigelvkl...lpegkkvleklkaKekimellehedeevkyeALkavqkll 113
                    + +l++ L++ll+ ++d ++   a+  i++ ++     pe+ ++l k ++ + + ++le +d+++ + AL a++++l
    EPX71199.1 371 IESNLIQPLVHLLK-NADYKTKKEACWAISNATSGglgQPEQIRYLVKQGVIKPLCDMLEGSDNKIVQVALDAIENIL 447
                   45688999999994.5665666666666666665433378999999999999999999*************9999886 PP

  == domain 6  score: 9.2 bits;  conditional E-value: 0.00098
  V-ATPase_H_C  42 kllkkLiklleeskdktvlavalnDigelvkllpegkkvl...........eklkaKekimellehedeevkyeALkavqkll 113
                    ++k L+++le  +d+++++val  i++++k+ +  +++            e+ ++ +ki el ++ ++++  +A + ++k+ 
    EPX71199.1 419 GVIKPLCDMLE-GSDNKIVQVALDAIENILKVGEMDRTMDvqninlcavyiEEAGGMDKIYELQTSGNNDIYLKAYNIIEKYF 500
                   57999999995.78888889998888888887443222212233444666699999***************999988888765 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0      0.16   2.1e+02      53      89 ..     157     193 ..     122     209 .. 0.83
   2 ?    0.7   0.0      0.38   4.9e+02      61     137 ..     251     328 ..     246     334 .. 0.63
   3 !   13.3   0.0   5.1e-05     0.065      18      90 ..     370     451 ..     355     489 .. 0.80

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.16
        Cnd1  53 mvkekgflselaklleDenprVvanalaalteiseks 89 
                 +v ++g + ++ +ll+ +++ V++ ++ al +i+  s
  EPX71199.1 157 VVVNSGAVPRFIHLLSSPEKDVREQVVWALGNIAGDS 193
                 5778889***********************9998765 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.38
        Cnd1  61 selaklleDenprVvanalaalteisek.senaiynllpdiisklsdalnecsewgqitilefLlsyipkdkqeaesl 137
                  +lakll  ++ +Vv  a  a++ +s+  +e++   +   ++ +l+d ln+ s + q+  l+++ + ++ ++ +++ +
  EPX71199.1 251 PTLAKLLYSDDVEVVVDACWAISYLSDGpNEKIGAIIDVGCAPRLVDLLNSSSPNIQTPALRSVGNIVTGTDAQTQII 328
                 567777766677777777777777777755555555556667777777777666666666666666666555544444 PP

  == domain 3  score: 13.3 bits;  conditional E-value: 5.1e-05
        Cnd1  18 lve.ylvepLrkrLkDedpyVRktaaivvakL.....ilnd...mvkekgflselaklleDenprVvanalaalteisekse 90 
                 ++e +l++pL + Lk  d   +k a  ++++       +++   +  ++g+++ l ++le +++++v+ al a+++i++ +e
  EPX71199.1 370 VIEsNLIQPLVHLLKNADYKTKKEACWAISNAtsgglGQPEqirYLVKQGVIKPLCDMLEGSDNKIVQVALDAIENILKVGE 451
                 55525799**********************98777665666333456888***************************99854 PP

>> Mo25  Mo25-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.1       0.3   3.8e+02      29     117 ..      37     133 ..      15     178 .. 0.61
   2 !   14.4   0.0   1.4e-05     0.018      63     187 ..     366     502 ..     333     508 .. 0.74

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.3
        Mo25  29 kkkaeeelskqLkslkeillgdpdtepskeqvaqLlqeilkedllyklvknlkklefearkdvaqifsnllrrktksklp............aveylet 115
                 k+k ee+l+k  ++l+++l++++ ++ ++e v+ ++   ++ d + kl+  + + ++e + ++++ f + l+++t+   p             v++le+
  EPX71199.1  37 KQKREESLNKR-RNLNSVLQNETSENMENEPVRGFMDGQMD-DEFPKLTADVMSNNIELQLNAVTKFRKFLSKETNP--PidrviacgvvdrFVQFLES 131
                 33434445444.66777888877777777777665544443.34566666666666666666666666666665422..22244445544444455544 PP

        Mo25 116 kp 117
                 ++
  EPX71199.1 132 EH 133
                 44 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 1.4e-05
        Mo25  63 Llqeilkedllyklvknlkklefearkdvaqifsnllrrktksklp............aveyl.etkpeilqlllegyeskeialhagsilrecik.ye 147
                  +q++++++l++ lv+ lk+ +  ++k+++  +sn  +   ++               ++++l  + ++i+q+ l+++e+   +l++g++ r++     
  EPX71199.1 366 QIQAVIESNLIQPLVHLLKNADYKTKKEACWAISNATSGGLGQPEQirylvkqgvikpLCDMLeGSDNKIVQVALDAIEN---ILKVGEMDRTMDVqNI 461
                 45799********************************9966444442333344434446666654556666666666665...8888888888854366 PP

        Mo25 148 alariiLysee.fwkffeyvensnfeiasdafetlkelLtk 187
                 +l+++ +++   ++k++e+ ++ n +i  +a +++++++  
  EPX71199.1 462 NLCAVYIEEAGgMDKIYELQTSGNNDIYLKAYNIIEKYFSD 502
                 77777775554499999999999999999999999888865 PP

>> RICTOR_V  Rapamycin-insensitive companion of mTOR, domain 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.0     0.006       7.7       7      61 ..     141     195 ..     139     197 .. 0.83
   2 ?    5.5   0.1     0.015        20       5      40 ..     181     217 ..     177     235 .. 0.86
   3 ?    2.3   0.1      0.16     2e+02       4      40 ..     350     387 ..     347     390 .. 0.81
   4 ?    3.7   0.0     0.057        73       3      40 ..     391     432 ..     389     459 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.006
    RICTOR_V   7 LWaiGhigsselGie.lldeydivedivelaeespvlslRGtafyvLglissteeg 61 
                  Wa+ +i+s +   + ++ ++ +v+++++l  +sp   +R  ++++Lg i+  +++
  EPX71199.1 141 AWALTNIASGTTDQTrVVVNSGAVPRFIHLL-SSPEKDVREQVVWALGNIAGDSSA 195
                 5********766666699999*******987.899999999999999999976665 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.015
    RICTOR_V   5 aaLWaiGhigsselGie.lldeydivedivelaeesp 40 
                 ++ Wa+G+i+   + ++ ++ ++ ++e ++ ++e+s+
  EPX71199.1 181 QVVWALGNIAGDSSACRdYVLSCGCLEPLLYIIETST 217
                 679*******999999889999999999999888775 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.16
    RICTOR_V   4 KaaLWaiGhigs.selGielldeydivedivelaeesp 40 
                 K   W+i +i +   + i+ + e+++++ +v+l ++++
  EPX71199.1 350 KETCWTISNITAgNIQQIQAVIESNLIQPLVHLLKNAD 387
                 6778******99455789966677*******9999876 PP

  == domain 4  score: 3.7 bits;  conditional E-value: 0.057
    RICTOR_V   3 lKaaLWaiGhigsselG....ielldeydivedivelaeesp 40 
                 +K a Wai +  s  lG    i++l ++ +++ ++++ e s+
  EPX71199.1 391 KKEACWAISNATSGGLGqpeqIRYLVKQGVIKPLCDMLEGSD 432
                 69999******9965552222777777799999999998876 PP

>> Arm_2  Armadillo-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0     0.029        37     125     170 ..     151     198 ..     125     204 .. 0.72
   2 !    9.8   0.0   0.00038      0.49       8     187 ..     200     386 ..     193     398 .. 0.76

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.029
       Arm_2 125 tneyqhllvsy..isellsLLskGnekikvqvLkvllnlseNpamtre 170
                 t ++  ++v++  ++ +++LLs+ ++ ++ qv   l n++    + r+
  EPX71199.1 151 TTDQTRVVVNSgaVPRFIHLLSSPEKDVREQVVWALGNIAGDSSACRD 198
                 444445555543489999999999999999999999999887777766 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00038
       Arm_2   8 vLepkelekllalLkss.edpliqeialltlgn...saaysvnqdiirdlggitiianllsksnaevkekalnalnnlsenvenqkkikvyvnqvckdi 102
                 vL+   le ll+++++s  d ++ + a+ tl+n    ++ + n  +i     ++++a+ll + + ev + a  a+  ls++ +  +ki + ++  c   
  EPX71199.1 200 VLSCGCLEPLLYIIETStADLSMLRNATWTLSNlcrGKNPPPNWSTISV--ALPTLAKLLYSDDVEVVVDACWAISYLSDGPN--EKIGAIIDVGCAPR 294
                 4777788888888876415777888888887663325777888888864..68999999999999999999999999999876..57888999999999 PP

       Arm_2 103 vssplNse...vQlagLklltnlsvtneyq.hllvs..yisellsLLskGnekikvqvLkvllnlse.Npamtrellsakvlssllslfnkk 187
                 ++  lNs+   +Q  +L+ ++n+ +  + q  ++++   ++ + +LL +  e+i+ ++   ++n+++ N + ++ +++ +  + l+ l ++ 
  EPX71199.1 295 LVDLLNSSspnIQTPALRSVGNIVTGTDAQtQIIIEcgALNAFPNLLCHHKENIRKETCWTISNITAgNIQQIQAVIESNLIQPLVHLLKNA 386
                 99999996444899999999998665444415555423689999999999999999999999998543888999999988888888776655 PP

>> DCB  Dimerisation and cyclophilin-binding domain of Mon2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   8.6e-05      0.11      57      96 ..     417     456 ..     383     482 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 8.6e-05
         DCB  57 seeilkPlllacetknpkivqiaLgslqrLisheviseea 96 
                  + ++kPl+   e  + kivq+aL+++ ++++++ ++ + 
  EPX71199.1 417 KQGVIKPLCDMLEGSDNKIVQVALDAIENILKVGEMDRTM 456
                 3579**************************9999988765 PP

>> HEAT_PBS  PBS lyase HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.42   5.4e+02       2      14 ..     137     149 ..     136     172 .. 0.78
   2 ?    6.2   0.0     0.016        21       1      14 [.     178     191 ..     178     201 .. 0.86
   3 ?    0.7   0.0      0.98   1.2e+03       3      25 ..     224     257 ..     223     258 .. 0.78

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.42
                 HHHHHHHHHHCTS CS
    HEAT_PBS   2 RraAakaLgqlgd 14 
                 + +Aa+aL ++ +
  EPX71199.1 137 QFEAAWALTNIAS 149
                 568*****98876 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.016
                 HHHHHHHHHHHCTS CS
    HEAT_PBS   1 vRraAakaLgqlgd 14 
                 vR   ++aLg++  
  EPX71199.1 178 VREQVVWALGNIAG 191
                 89*********986 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.98
                 HHHHHHHHHCTS...........GGGHHHHHHHC CS
    HEAT_PBS   3 raAakaLgqlgd...........eeaipaLleaL 25 
                 r+A++ L +l               a+p+L ++L
  EPX71199.1 224 RNATWTLSNLCRgknpppnwstiSVALPTLAKLL 257
                 7899999999887777777777777888887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (539 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1251  (0.0697752); expected 358.6 (0.02)
Passed bias filter:                      786  (0.0438396); expected 358.6 (0.02)
Passed Vit filter:                        84  (0.00468515); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.77u 0.31s 00:00:01.08 Elapsed: 00:00:00.46
# Mc/sec: 3484.30
//
Query:       EPX71200.1  [L=245]
Description: F0-ATPase subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.7e-47  159.6   8.1    6.4e-47  159.2   8.1    1.2  1  Mt_ATP-synt_B   Mitochondrial ATP synthase B chain precursor 
  ------ inclusion threshold ------
      0.031   14.0   0.1      0.043   13.5   0.1    1.3  1  DNA_pol_A_exo1  3'-5' exonuclease
       0.58   10.2   9.6          4    7.5   0.9    2.3  2  DUF1664         Protein of unknown function (DUF1664)


Domain annotation for each model (and alignments):
>> Mt_ATP-synt_B  Mitochondrial ATP synthase B chain precursor (ATP-synt_B)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.2   8.1   1.1e-50   6.4e-47       2     163 .]      78     239 ..      77     239 .. 0.99

  Alignments for each domain:
  == domain 1  score: 159.2 bits;  conditional E-value: 1.1e-50
                    HHHHHHCCCSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHH CS
  Mt_ATP-synt_B   2 iayliSkeiyvvneEtlvalcfigflilvakslgpsikefldkriekiqeelnqsrnlkeealkerieqekklqslveltkslfevskeqvaleae 97 
                    +a++iSk+iyvvneEt+v+++f+g+l ++ + ++++++e+ +k i +i ++l+ sr+ +++a++eri+q++ lq + e+tk+lf  sk+++ +eae
     EPX71200.1  78 LATAISKGIYVVNEETIVVASFLGLLGVFGTLGRKAYNEWSEKTINNIANILETSREGHKDAIQERIQQVSGLQDVEEITKVLFNTSKDTARMEAE 173
                    689********************************************************************************************* PP

                    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHCTCCCCHHHHHHHHHHHHH CS
  Mt_ATP-synt_B  98 aferelqaklareikkkldtlvnaessrrqrlQdelvkgvissVlkelsspkfkkevlqesiadle 163
                    +fe+e+q++l +++k++ld++vn+e+s r  +Q+ lv+ v s+V +++s++kf++e l+es+a++e
     EPX71200.1 174 IFELEQQVALTHQAKSVLDSWVNHEASIRADQQKRLVSEVLSRVDSKVSTQKFQQEALNESVAEVE 239
                    ***************************************************************986 PP

>> DNA_pol_A_exo1  3'-5' exonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.1   7.2e-06     0.043      66     118 ..     144     196 ..     125     237 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 7.2e-06
                     GHHHHHHHT-TTSEEEESSHHHHHHHHHHHHTS--SSEEEHHHHHHHTTHSTT CS
  DNA_pol_A_exo1  66 lealkrlledenitkvghnakfDlevlardfgielenlfdtmlaayvldyers 118
                     +++++ l + e+itkv++n + D + +  ++ +  + ++ t+ a+ vld   +
      EPX71200.1 144 IQQVSGLQDVEEITKVLFNTSKDTARMEAEIFELEQQVALTHQAKSVLDSWVN 196
                     677777778899************************************98776 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   2.3   0.00093       5.6      56     117 ..     132     195 ..     111     201 .. 0.78
   2 ?    7.5   0.9   0.00067         4      58      96 ..     204     242 ..     196     245 .] 0.85

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.00093
     DUF1664  56 slaatkrhLssridrvd..kkldeqkeiskeikeevtevredlseigedvesvkeavegleskl 117
                 s +  k+ +++ri++v   + ++e +++  +++++ ++++ ++ e++++v   ++a + l+s +
  EPX71200.1 132 SREGHKDAIQERIQQVSglQDVEEITKVLFNTSKDTARMEAEIFELEQQVALTHQAKSVLDSWV 195
                 3346799999999999833467788888999999**************9999999999888766 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.00067
     DUF1664  58 aatkrhLssridrvdkkldeqkeiskeikeevtevredl 96 
                  ++kr  s+ + rvd+k+  qk  +++++e v+ev++ l
  EPX71200.1 204 DQQKRLVSEVLSRVDSKVSTQKFQQEALNESVAEVEKVL 242
                 46788888889***********************98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1519  (0.0847231); expected 358.6 (0.02)
Passed bias filter:                      589  (0.0328518); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 1831.48
//
Query:       EPX71201.1  [L=483]
Description: CBF/Mak21 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      9e-28   97.4   0.6    2.5e-27   96.0   0.6    1.8  1  CBF       CBF/Mak21 family


Domain annotation for each model (and alignments):
>> CBF  CBF/Mak21 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.0   0.6   1.4e-31   2.5e-27       2     170 .]     282     427 ..     281     427 .. 0.93

  Alignments for each domain:
  == domain 1  score: 96.0 bits;  conditional E-value: 1.4e-31
         CBF   2 vqaLvllfqllskqkqsel.lsasdRFyraLYrkLldpelltsskralllnlly.....kalkadkpvkrvaAFvKRllqlalhappsfalgllallse 94 
                 ++aL+ lf+l+ ++   +l ++    Fy +LY++L d +ll   +r+++++ll+     ++l    p++ +a+F+K+l++lal+ +p  ++ ++ ++++
  EPX71201.1 282 LLALNGLFTLIMEH---NLdYPL---FYPKLYALL-DRNLLYLRTRSRFFRLLDlflssTHL----PATVIASFIKKLARLALTGSPGAIAIVIPFIYN 369
                 79***********7...666899...*********.******************98888888....********************************* PP

         CBF  95 llkhppklkalleekfkdvkeeeeeekkeekkkskaesgvYdptkrdpeysnaeasslwElsllakhfhPtValfA 170
                  l+ +p+++ +l+   +dv+ee               ++++d ++ dp+ + a  sslwEl++l++h+ P++a +A
  EPX71201.1 370 SLQRHPSCMRMLH---RDVSEE---------------DDPFDIQQPDPLLTSAIDSSLWELHTLQNHYYPNIASLA 427
                 ***889*******...444333...............589***99***************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (483 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       614  (0.0342462); expected 358.6 (0.02)
Passed bias filter:                      465  (0.0259356); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.38
# Mc/sec: 3777.15
//
Query:       EPX71202.1  [L=550]
Description: glucose-6-phosphate isomerase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.1e-237  787.9   0.1   3.5e-237  787.7   0.1    1.0  1  PGI       Phosphoglucose isomerase


Domain annotation for each model (and alignments):
>> PGI  Phosphoglucose isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  787.7   0.1    2e-241  3.5e-237       1     486 []      59     543 ..      59     543 .. 0.99

  Alignments for each domain:
  == domain 1  score: 787.7 bits;  conditional E-value: 2e-241
                 E-TTSS--HHHHHHHHHHHHHTTHHHHHHHHHTT---BTTTTB---HHHHT-TT----EETTEESHHHHHHHHHHHHHHHHHHHTT-SB-TTS-B--EE CS
         PGI   1 dysknkvddeilealvklaeeaklkaarealfaGekinstenravlhvalrnrsnkpilvdGkdvvpevkevldkmkefsekvrsGewkGatgkaitdv 99 
                 d+skn v++e+++ lv+la+ea+++  r+alfaGe+in+tenrav+h alrn s+kp++v+G+dv+p v++vl++mkefs++vrsG+wkG+tgk i+ +
  EPX71202.1  59 DFSKNLVTEETIKLLVQLAKEANVEGLRDALFAGEHINFTENRAVYHPALRNLSDKPMKVNGNDVMPGVRSVLNHMKEFSDAVRSGAWKGYTGKPIRSI 157
                 9************************************************************************************************** PP

                 EEE--GGGTHHHHHHHHHTGGG-TT.-EEEEE--SSHHHHHHHHTT--GGGEEEEEE-SSS--HHHHHHHHHHHHHHHHHH--GGGGGGTEEEESS-HH CS
         PGI 100 vniGiGGsdlGPvlvtealkkeser.lkvafvsnvdgthiaevlkkldpettlfivasktfttaetllnaesakewllkalkedsavakhfvalstnae 197
                 vniGiGGsdlGPv+vtealk++ ++ l+++fvsn+dgth+ae+l k dpettl++vasktfttaet +na+sakew+l+++k+  +vakhf+alstn++
  EPX71202.1 158 VNIGIGGSDLGPVMVTEALKPYGKKdLDLHFVSNIDGTHLAEALSKCDPETTLILVASKTFTTAETCTNAKSAKEWFLSKAKDTAHVAKHFAALSTNEK 256
                 **********************9888************************************************************************* PP

                 HHHHHT--GGGEEE--TTS-GGG-TTSGGGHHHHHHH-HHHHHHHHHHHHHHHHHHHHS-GGG-HHHHHHHHHHHHHHTS---EEEEEES-GGGTTHHH CS
         PGI 198 kveefGideknmfefwdwvGGryslwsaiGlsvalsiGfenfeelleGaaaidkhfleaplekniPvllalvgvwyvnflgaeteailpydqylerlaa 296
                 +v  fGid+ nmfef dwvGGrys+wsaiGlsval+iG+enfe++l Ga+a+d++f+++ple+niP l+al+++wy++f+ga+t+ + pydqyl+r++a
  EPX71202.1 257 EVTAFGIDSANMFEFSDWVGGRYSVWSAIGLSVALYIGYENFEAFLGGAHAMDNYFRSTPLEENIPALAALISIWYSDFFGAQTHLVAPYDQYLHRFPA 355
                 *************************************************************************************************** PP

                 HHHHHHHHHH---BBTTS-B-SS--S-EEE---TTTGGGTSHHHHHHSSS---EEEEEEEE-S-.GGGGHHHHHHHHHHHHHHHHHHH-B-HHHHHHHH CS
         PGI 297 ylqqldmesnGksvtkdgvlvdvetgeiifGeagtngqhafyqlihqGtkliPcdfiaavksqn.ieiadhhkillsnffaqtealmvGkseeevkkel 394
                 ylqql+mesnGk +t++g +v+++tg+i++Ge+gtn+qh+f+qlihqGtkliP+df+++++s+n i +++hh++l+snf aqtealm Gk+++evk+e 
  EPX71202.1 356 YLQQLSMESNGKAITRSGDMVNYTTGKILWGEPGTNSQHSFFQLIHQGTKLIPADFLIPIESHNpIDNNKHHRMLFSNFTAQTEALMLGKTPSEVKAEG 454
                 ****************************************************************9********************************98 PP

                 HHTHHHHHGGGG-B-----EEEEEEEE--HHHHHHHHHHHHHHHHHHHHHHTB-TT--GGGHHHHHHHHHHHHHHSSS----SS-HHHHHHH CS
         PGI 395 akakveklvphktfeGnrPsnsillekltpaelGalialyehkilvqGviwginsfdqwGvelGkelakkilkeleasekvsdfdsstngli 486
                    + +++vphktf GnrPsnsi+++k+tpa+lGali++ye  ++++G++w+insfdq+GvelGk+la+++l++lea+ kv ++d+stngli
  EPX71202.1 455 ---ASDEIVPHKTFVGNRPSNSIIAKKITPASLGALISFYEWVTFTEGAVWNINSFDQFGVELGKKLAQNVLSQLEAEGKVDNHDASTNGLI 543
                 ...4679************************************************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (550 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       379  (0.0211389); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 3827.60
//
Query:       EPX71203.1  [L=284]
Description: thiamine pyrophosphate transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.4e-49  165.2   5.3    3.6e-17   62.1   0.1    3.1  3  Mito_carr        Mitochondrial carrier protein
  ------ inclusion threshold ------
       0.27   10.4   2.8        1.3    8.1   0.0    2.9  3  Serine_protease  Gammaproteobacterial serine protease


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.7   0.1   1.4e-17   1.2e-13       4      90 ..      12      90 ..       9      96 .. 0.93
   2 !   54.0   0.2   1.3e-18   1.2e-14       5      91 ..     101     181 ..      97     186 .. 0.93
   3 !   62.1   0.1     4e-21   3.6e-17       7      95 ..     191     274 ..     188     276 .. 0.96

  Alignments for each domain:
  == domain 1  score: 50.7 bits;  conditional E-value: 1.4e-17
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr  4 svlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlk 90
                +++++ +aGgla ++  ++++P+dv+K+r+q++++s        +l+vl +++++eG r+l+rG++ + + + ++ +  fv++ + +
  EPX71203.1 12 PAWHYTFAGGLASVICRFAIAPFDVLKIRMQVSQSS--------FLQVLNTTLQHEGYRALWRGNISAEFLYLIYGSTEFVVFSKSR 90
                789999***************************999........999**********************************998765 PP

  == domain 2  score: 54.0 bits;  conditional E-value: 1.3e-18
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   5 vlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkr 91 
                  + ++l+G++ag++at++ +P+d+++ ++ ++k++ +      +++++k+i+++ G+rg++ Gl+++l ++ p  +l f++y  +  
  EPX71203.1 101 HVLNFLCGAFAGSCATIASYPFDTLRSQFAASKETPR------FMSTVKNILQTRGIRGFFPGLTATLYQIGPHVGLFFMAYRAIYS 181
                 5679**************************9999977......9**************************************98765 PP

  == domain 3  score: 62.1 bits;  conditional E-value: 4e-21
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   7 kellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                 ++ ++G+lag++a+ + +P d++   +q++k ++ +     +l+++k+++++ G rglyrGl +++ +vap +a+++++ye + r+l+k
  EPX71203.1 191 SSSISGVLAGVTAKALLFPADTIVKNMQVSKLQNPS-----FLQCFKTVLHTSGARGLYRGLPISIAKVAPGRAITMLIYEETLRTLNK 274
                 6789******************************99.....********************************************9998 PP

>> Serine_protease  Gammaproteobacterial serine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0     0.077   6.9e+02      15      56 ..      25      70 ..      16      82 .. 0.66
   2 ?    8.1   0.0   0.00014       1.3     166     198 ..      95     126 ..      61     135 .. 0.83
   3 ?   -0.1   0.1     0.046   4.1e+02      23      54 ..     209     247 ..     194     263 .. 0.50

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.077
  Serine_protease 15 fsvsaltsPfkalLtnlqkdgsvlpsaysgG....lfralYrGfla 56
                     +       Pf +l +++q ++s+  + ++        ral+rG ++
       EPX71203.1 25 VICRFAIAPFDVLKIRMQVSQSSFLQVLNTTlqheGYRALWRGNIS 70
                     4445556799999999999887654444443221237788888765 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.00014
  Serine_protease 166 flkindelynkllaGalsGviAtvlttifnsyk 198
                      ++++n+++  ++l Ga +G  At+ +++f +++
       EPX71203.1  95 NMQMNKHVL-NFLCGAFAGSCATIASYPFDTLR 126
                      455555544.5889***************8876 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.046
  Serine_protease  23 PfkalLtnlqkdgsvlpsay........sgGlfralYrGf 54 
                      P  +++ n+q ++   ps +          G  r+lYrG 
       EPX71203.1 209 PADTIVKNMQVSKLQNPSFLqcfktvlhTSG-ARGLYRGL 247
                      4455555555544444422222222221222.66677765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (284 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       382  (0.0213063); expected 358.6 (0.02)
Passed bias filter:                      307  (0.0171231); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2083.15
//
Query:       EPX71204.1  [L=302]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.4e-05   22.3   0.0    0.00012   21.8   0.0    1.2  1  Questin_oxidase  Questin oxidase-like


Domain annotation for each model (and alignments):
>> Questin_oxidase  Questin oxidase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.0   6.6e-09   0.00012      41     159 ..      81     189 ..      52     256 .. 0.66

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 6.6e-09
  Questin_oxidase  41 ekiteenwrdhLgdeeyyrayldFFedele.e..kgwkevleeylfsnegaeellsrlfggllHPlIhlGyglefgqpalvaegLAqaavhyds 131
                       + ++  ++ h+g  ++ + ++ F+ed+l  +  + + ++  +  f  e + e + +l+     Pl  lG gle+++++ ++ + A aa+ + +
       EPX71204.1  81 YELDTLVYKSHIGFPQFVEGFVLFYEDRLVyDggYSIYDL-TRKTF--EADPEYVFGLCYEGCVPLAYLGIGLELDMQETIIDAFAAAACFS-P 170
                      44567889**********************5544444455.55567..5677888888888888****************************.5 PP

  Questin_oxidase 132 dpsellsaeaassraessegsslleile 159
                        se         +a+++e+ s  ei++
       EPX71204.1 171 PISE---------SAPPKEPASFCEIVQ 189
                      5552.........122222223333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       361  (0.020135); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.20s 00:00:00.66 Elapsed: 00:00:00.38
# Mc/sec: 2382.93
//
Query:       EPX71205.1  [L=698]
Description: hypothetical protein SOCG_01423 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.037   13.7   0.3         11    5.9   0.0    2.9  3  SPOB_a    Sensor_kinase_SpoOB-type, alpha-helical domain


Domain annotation for each model (and alignments):
>> SPOB_a  Sensor_kinase_SpoOB-type, alpha-helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0    0.0013        23       8      24 ..     227     243 ..     223     245 .. 0.86
   2 ?    5.9   0.0    0.0006        11      29      52 ..     266     289 ..     266     294 .. 0.89
   3 ?   -3.1   0.0      0.39   6.9e+03      36      55 ..     313     332 ..     312     334 .. 0.77

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0013
      SPOB_a   8 elkeliklLrsqRHDfl 24 
                   ++l ++L+sq+H+fl
  EPX71205.1 227 TYEHLFQSLSSQKHEFL 243
                 568999**********8 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0006
      SPOB_a  29 vIsGylqLgkydkaeeyieevvke 52 
                 ++ +++ L+++ +ae++i++++++
  EPX71205.1 266 LVESFVRLKRMSDAESIIHRYIQQ 289
                 68899****************998 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 0.39
      SPOB_a  36 Lgkydkaeeyieevvkelke 55 
                 L +++++ +++++  +++ +
  EPX71205.1 313 LSNMERILSLMKNCNTDMST 332
                 67889999999988888865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (698 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       528  (0.0294495); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.27s 00:00:00.88 Elapsed: 00:00:00.46
# Mc/sec: 4601.52
//
Query:       EPX71206.1  [L=767]
Description: sulfatase modifying factor 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      2e-75  253.8   0.0    2.9e-75  253.3   0.0    1.2  1  Methyltransf_33  Histidine-specific methyltransferase, SAM-de
    1.7e-24   86.8   1.4    2.2e-23   83.2   0.1    2.6  2  FGE-sulfatase    Sulfatase-modifying factor enzyme 1
     0.0013   19.3   0.4      0.004   17.6   0.4    1.9  1  DinB_2           DinB superfamily
  ------ inclusion threshold ------
      0.073   12.9   0.0       0.19   11.5   0.0    1.6  1  Methyltransf_31  Methyltransferase domain


Domain annotation for each model (and alignments):
>> Methyltransf_33  Histidine-specific methyltransferase, SAM-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  253.3   0.0   6.5e-79   2.9e-75      14     306 ..      28     325 ..      17     328 .. 0.95

  Alignments for each domain:
  == domain 1  score: 253.3 bits;  conditional E-value: 6.5e-79
  Methyltransf_33  14 ktlpskllYDarGselFeeitelpeYyptrtEiaiLqehaaeiaaai..paa...tlvelGsGsseKtrlLLealeaaekeltYvplDvseeaL 102
                       +lp++llYD++G++lF++it ++eYy+  +E +iLq+ +++ia+++  p +   t+velG+G++ Kt++LL+a+e+++k++++++lD++e++L
       EPX71206.1  28 CQLPTSLLYDEKGLQLFDKITGTEEYYLFDCELSILQRDSDAIAQELlsP-DlpnTVVELGCGAMHKTKHLLDAFERTGKDVNFYALDLNEDEL 120
                      58*******************************************98653.3467*************************************** PP

  Methyltransf_33 103 eealealaa..eypsleveglvgdyedglewlaslpeaederrlvlflGssigNlepeeaaafLrklraalgpgdllLlGvDlvkdeekleaAY 194
                      ++ l++l++  +y++++v+g++g ++  l+ +++   +++++  +l+lGssigN++++ a++f++++++ l+ gd +Ll++D +++ e +e+AY
       EPX71206.1 121 RRGLSQLEQhaSYKHVKVAGICGCFDMFLKNIDKFRGSSNGQISILYLGSSIGNFNRDSATKFIKSFSDRLAIGDKFLLSFDHRNSAELVERAY 214
                      *******8877999*************99999999999********************************999********************* PP

  Methyltransf_33 195 ndsagvtaaFnlnllerinrelga.dfdledfehvaewnaeegriemylrskrdqtvrvealdltvafkagekirteiSyKyteeevrelleaa 287
                      +ds  vt+ F +n+l+ +nr +g+  f+++d+++v++++++ g +++ylr+k+d+t+  +     ++fkag  + +e S K + +e re++++ 
       EPX71206.1 215 DDSTRVTETFEKNILTSANRVFGEdLFNENDWDYVSKYEEDLGVHRAYLRAKKDLTIAKG--PMVFNFKAGHLLLCEESWKSNDNECREIIHNG 306
                      ************************77*******************************644..589***************************** PP

  Methyltransf_33 288 glevlkvWtdeksdfalyl 306
                      ++ v +v t++   +++y+
       EPX71206.1 307 NFVVDNVHTNTTPSYSVYV 325
                      *************999997 PP

>> FGE-sulfatase  Sulfatase-modifying factor enzyme 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1      0.41   1.8e+03      37      92 ..     380     437 ..     379     440 .. 0.74
   2 !   83.2   0.1   4.9e-27   2.2e-23      21     260 .]     553     765 ..     520     765 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.41
                    EEEESS--BHHHHHHHHHH..H....HSSETTEEEEETSCTTBCCTTC-SSTT-TTSB CS
  FGE-sulfatase  37 FaidkteVTnaqyaafvea..tgyeteaasqwwaeveganvrhpegrksdikkradhP 92 
                    F+++  +V n  y   + +      ++++  w ++  + +v++pe+ +++ + ++++P
     EPX71206.1 380 FYMGHIPVFNDIYLSRIFEnpATASKREYWDWFQRGIDPDVENPEQCHWHSQTPPKWP 437
                    77888888888876655552422333467788999999999****9999999999999 PP

  == domain 2  score: 83.2 bits;  conditional E-value: 4.9e-27
                    TGGCCC-S-EEEEES-EEEESS--BHHHHHHHHHHH....HSSETTEEEEETSCTTBCCTTC-SSTT-TTSB--S--HHHHHHHHHHHCHHHTS-E CS
  FGE-sulfatase  21 tandeeapahevtvraFaidkteVTnaqyaafveatgyeteaasqwwaeveganvrhpegrksdikkradhPvvhVsweDavaYArwlgkktgegy 116
                      +d+e+p + +++++F i++ +++n++y +++e++  ++++++++w+ ++g+ + +++++    ++++ +Pv+  s+e+ + YA+ +g+      
     EPX71206.1 553 FGWDNEKPLRMKQIPSFQIANRPISNGEYLDYLESKPADDKHYPKSWKVIDGKLYVTTMYGLLPLESYHSWPVMA-SFEELNDYAASKGC------ 641
                    5689*******************************9999999********************************9.**************...... PP

                    E---HHHHHHHHHTT-SSSSCTTBSTTSCCGB...SSTTTTB--TTCGGS-SS.---TT-S-B-TTS-B-TTCSSEEEEEEE--...THCCH-... CS
  FGE-sulfatase 117 rLPteaEweyAArggkkgreypwgdelkpakniwqGslakfekeaaaadsqngrtspvgsfppnalGlyDmaGNvwEWtsdwyk...kyalap... 206
                    rLPte+E++        + +   + e+++   +++G           a +++    p + +++   G +++   +wEW s++++   +  ++p   
     EPX71206.1 642 RLPTEEELN-----HFYDHVLHRKSETYV---STKGM----------ATGFQQ-LHPANLKDD---GTHQIFTGAWEWSSTVLDkheG--FEPeal 713
                    *********.....456778888888775...33343..........233333.467777777...78888888**********8553..444447 PP

                    SSCS----SS-SSEEEEC--TTS.TTGGCTSTT-E.EEE-TT--BTTEEE--EE CS
  FGE-sulfatase 207 aeelsqeaekgelrvvkGgswlkaelssllraafrasaetpdtaasdvGfRlvr 260
                    + ++++++++g+++vv Ggs+++   +  +r +fr ++++ +++++++  Rl++
     EPX71206.1 714 YPDYTKDFFDGKHNVVLGGSFATV-PRIANRRSFR-NFYQRQYQYAWITARLAK 765
                    9*********************98.5*********.************999986 PP

>> DinB_2  DinB superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.4     9e-07     0.004      24      91 ..     370     463 ..     340     486 .. 0.72

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 9e-07
      DinB_2  24 qpspgkwsiawllaHlgnveelllerlrgeeap.........................rpgldpltppsaaealay.laevrarllallealtd 91 
                    p++++++ +++H+  +++++l r+++++a                          + + +p  +ps++e++ y  a++++++l ll++  +
  EPX71206.1 370 VWIPLRHPFIFYMGHIPVFNDIYLSRIFENPATaskreywdwfqrgidpdvenpeqchWHSQTPPKWPSPNELRSYeVASWQNHILKLLDGSHA 463
                 44699***********************876666666666666666666666656666566666666*******86478888888888887544 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   4.2e-05      0.19       5      52 ..      81     131 ..      78     139 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 4.2e-05
  Methyltransf_31   5 lrvlDlGCGtGeltfelae...elgpkaevvGiDiseeaielArenaqklg 52 
                      ++v++lGCG+ ++t+ l +   + g++ +++ +D +e+ +++  + ++++ 
       EPX71206.1  81 NTVVELGCGAMHKTKHLLDafeRTGKDVNFYALDLNEDELRRGLSQLEQHA 131
                      5799***********99999999999***************9999888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (767 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       428  (0.0238719); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.65u 0.27s 00:00:00.92 Elapsed: 00:00:00.43
# Mc/sec: 5325.96
//
Query:       EPX71207.1  [L=136]
Description: meiosis inducing protein Mei3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.059   13.6   0.2       0.18   12.0   0.2    1.8  1  Chi-conotoxin  chi-Conotoxin or t superfamily


Domain annotation for each model (and alignments):
>> Chi-conotoxin  chi-Conotoxin or t superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.2     1e-05      0.18      15      47 ..      67      99 ..      66     106 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1e-05
  Chi-conotoxin 15 aSaPsvdaqpktkddvplaSfhdnakrtlqrlw 47
                   aS Ps +a+ ++k++v++ S  +++k+t + l 
     EPX71207.1 67 ASVPSYTAEFENKENVSKNSNDGSVKSTKRALA 99
                   8**************************999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       687  (0.0383178); expected 358.6 (0.02)
Passed bias filter:                      261  (0.0145574); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.43
# Mc/sec: 951.03
//
Query:       EPX71208.1  [L=273]
Description: wiskott-Aldrich syndrome binding protein Lsb1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-13   49.7   0.1    3.9e-13   48.8   0.1    1.5  1  SH3_1     SH3 domain
    2.7e-11   43.0   0.0    4.2e-11   42.4   0.0    1.3  1  SH3_2     Variant SH3 domain
    8.7e-11   41.5   0.3    1.6e-10   40.6   0.1    1.6  2  SH3_9     Variant SH3 domain


Domain annotation for each model (and alignments):
>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.8   0.1   6.4e-17   3.9e-13       1      48 []     144     189 ..     144     189 .. 0.98

  Alignments for each domain:
  == domain 1  score: 48.8 bits;  conditional E-value: 6.4e-17
                 EESSSBEXSSTTBXEBSTTEEEEEEEECSSSEEEEEETTSTEEEEEEG CS
       SH3_1   1 iAlYDYeaeesdELsfkkGDviivleksedgWwkgrlkgtgkeGliPs 48 
                 +AlY++++ ++++L+f+ GDvi v ++ +++Ww+g l   gkeG++Ps
  EPX71208.1 144 VALYNFPGPDAGDLPFRAGDVIDVKDHINKDWWRGSLY--GKEGIFPS 189
                 7*************************************..69*****8 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.4   0.0     7e-15   4.2e-11       1      56 [.     142     194 ..     142     195 .. 0.95

  Alignments for each domain:
  == domain 1  score: 42.4 bits;  conditional E-value: 7e-15
                 EEEESS-B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEECCCEEEEEGCGEEE CS
       SH3_2   1 yvraiedyvgedkseLsfkkGdvikvlslgskdsdgwwegevgGrvGlfPsslvee 56 
                 +v+a+ ++ g+d + L f++Gdvi v    ++++ +ww+g+  G+ G+fPs++v++
  EPX71208.1 142 RVVALYNFPGPDAGDLPFRAGDVIDVK---DHINKDWWRGSLYGKEGIFPSNYVSI 194
                 5899999*******************7...************************86 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       1.9   1.1e+04      42      48 ..       4      10 ..       3      10 .. 0.77
   2 !   40.6   0.1   2.7e-14   1.6e-10       1      48 [.     145     192 ..     145     193 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 1.9
       SH3_9 42 lvPanyv 48
                  P+ny+
  EPX71208.1  4 KNPENYI 10
                569***7 PP

  == domain 2  score: 40.6 bits;  conditional E-value: 2.7e-14
       SH3_9   1 AlypyepreddeLsLqrGDvitvieesedgWlegsltGrtGlvPanyv 48 
                 Aly++  +++  L++++GDvi v +  + +W++gsl G+ G +P+nyv
  EPX71208.1 145 ALYNFPGPDAGDLPFRAGDVIDVKDHINKDWWRGSLYGKEGIFPSNYV 192
                 8***********************999********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (273 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       657  (0.0366445); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1972.78
//
Query:       EPX71209.1  [L=90]
Description: dolichol-phosphate mannosyltransferase subunit 3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-21   76.0   0.1    2.2e-21   75.9   0.1    1.0  1  DPM3      Dolichol-phosphate mannosyltransferase subunit 3 (D


Domain annotation for each model (and alignments):
>> DPM3  Dolichol-phosphate mannosyltransferase subunit 3 (DPM3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.9   0.1   1.2e-25   2.2e-21       1      90 [.       1      86 [.       1      87 [. 0.98

  Alignments for each domain:
  == domain 1  score: 75.9 bits;  conditional E-value: 1.2e-25
        DPM3  1 MtraqktlalallllalwlalllrlvslplskvqdevvpvlPlwalvlfGayslatlgygvltfndcpeaakeLqkeikeAkadLrkkGv 90
                M+r+qk+l++ +ll++l+ +++l  +    +++++++ p++P++++++fG y+ atl+y+v+t +d+p+a+ +L ++ikeA++ L++kG+
  EPX71209.1  1 MQRIQKILLYYVLLTILYRVTYLFDL----EEPWSSLRPYTPYLFILAFGGYLGATLLYNVATTHDKPQAYVDLVNDIKEAQDALKTKGF 86
                9*********************9998....788********************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       493  (0.0274974); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.28s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 648.04
//
Query:       EPX71210.1  [L=597]
Description: threonine ammonia-lyase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.7e-77  260.1   0.2    3.5e-77  259.7   0.2    1.2  1  PALP            Pyridoxal-phosphate dependent enzyme
    3.8e-37  126.0   0.0    1.4e-18   66.4   0.0    2.4  2  Thr_dehydrat_C  C-terminal regulatory domain of Threonine deh


Domain annotation for each model (and alignments):
>> PALP  Pyridoxal-phosphate dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  259.7   0.2     4e-81   3.5e-77       3     294 .]     105     399 ..     103     399 .. 0.98

  Alignments for each domain:
  == domain 1  score: 259.7 bits;  conditional E-value: 4e-81
                 GCSSS--EEEECCTCCCCCCEEEEEEGGGSTTSBTTHHHHHHHHHHHHTTTTTSEEEEEBSSHHHHHHHHHHHHHT-EEEEEEETTS-HHHHHHHHHTT CS
        PALP   3 lgigpTPlvrlprlskelgvplflKlEslnptgSfKdRgaeyllarlkegtgaktvveassGNhgralAaaaallGlkvtivvpadaspekvallrllG 101
                 ++i +TPl +   +s+ +gvp++lK+E+l+p  SfK+Rga + +a+l+++   ++v+++s+GNh++++A+ a++lG+k+tiv+p++++  k +  ++lG
  EPX71210.1 105 DVIEETPLTKGVVISESTGVPVYLKREDLTPVFSFKVRGAHNKMASLDPKLLERGVIACSAGNHAQGVAYSARRLGVKATIVMPQNTPDIKWKNVKRLG 203
                 57899********************************************************************************************** PP

                 -EEEEECCHHHHHHHHHHHHHHHSTTCEE--TTTSHHHHHHHHTHHHHHHHHTT.TTEEEEEEE-SSSHHHHHHHHHHHHHSTT-EEEEEEECTTCGGT CS
        PALP 102 aevvevggdydeavaaaaelaaegegaylvsqfdnptviegygtiglEileqlg.gkpdavvvpvGgGgliaGiaaglkerrpdvrvigvepegsdala 199
                 a+v + g ++d a++ +++la+e ++  +++++d+p+vi+g+gt+glEil ql+ +k+da+++++GgGgliaGi+a++k   p+v+vigve+  +da+ 
  EPX71210.1 204 ANVLLHGANFDIAKQECNRLAEE-QNLRIIHPYDDPYVIAGQGTVGLEILHQLDlRKLDAIYCAIGGGGLIAGISAYVKRIAPHVKVIGVETFDADAFS 301
                 ***********************.*************************************************************************** PP

                 TCCS..S.SS..B.SSS.CCSTCSCGTTCCHHHHSEEEEEEEEEEHHHHHHHHHHHHHHHSB-B-HHHHHHHHHH...HHHHHHCCTTCEEEEEEE-B CS
        PALP 200 rslragrrvtvpvsdtiadglavgspselafelldrlvdeivtvsdeealeamrllarregivvepssaaalaal...klreagelkegdrvvviltg 294
                 rs+++++rvt++    +adg av+ ++ ++ +++ ++vd++v v+ +e+++a++ +  +++ vveps+a+++a++    ++++ + +++++ v++l+g
  EPX71210.1 302 RSVEEKKRVTLKDVGLFADGTAVKLVGQETYRVASKYVDDVVLVDKDEICAAIKDVFLDTRSVVEPSGAMSVAGMkryMAKHKPQNPDSASQVCVLSG 399
                 ***************************************************************************88777777777777999999998 PP

>> Thr_dehydrat_C  C-terminal regulatory domain of Threonine dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.1   0.0   1.2e-19   1.1e-15       1      90 [.     412     501 ..     412     502 .. 0.95
   2 !   66.4   0.0   1.5e-22   1.4e-18       5      91 .]     510     595 ..     507     595 .. 0.94

  Alignments for each domain:
  == domain 1  score: 57.1 bits;  conditional E-value: 1.2e-19
                     HHHTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Thr_dehydrat_C   1 eraevgegleallavefpeqpGaLkkFlellggrndiTlfeYrkagekngkvLvgvevsqaee.ldelierleklgykvedlsknellkeh 90 
                     era +g ++e +l+v++pe+pG++ k  + + +r  iT+f+Yr+ + +++++   + v+++ + l e  +++ ++++  +d s+nel+k+h
      EPX71210.1 412 ERADLGLNKEVFLSVTIPERPGSFEKLHSIITPRS-ITEFSYRYDNSEYANIYTSFVVKDRMKeLPEVLQKISEHNMIAVDISDNELAKTH 501
                     7999**********************999999999.**********************9986659***********************998 PP

  == domain 2  score: 66.4 bits;  conditional E-value: 1.5e-22
                     TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Thr_dehydrat_C   5 vgegleallavefpeqpGaLkkFlellggrndiTlfeYrkagekngkvLvgvevsqaeeldelierleklgykvedlsknellkehl 91 
                     +   +e+l+ +efpe+pGaL kFl+ l +   i+lf+Yr+ g ++++vL+g ++++ +  ++l e le  gy  +d+++n ++ ++l
      EPX71210.1 510 SDVLNERLYRFEFPERPGALSKFLKSLKEVCSISLFHYRNCGGDTANVLAGLRIKEGHL-EKLNEILETMGYAWVDETNNPVYLRYL 595
                     66789**************************************************7766.*********************998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (597 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       458  (0.0255452); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.30s 00:00:00.90 Elapsed: 00:00:00.48
# Mc/sec: 3744.15
//
Query:       EPX71211.1  [L=327]
Description: thiazole biosynthetic enzyme [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   3.4e-114  379.9   0.1   5.7e-114  379.2   0.0    1.4  2  Thi4            Thi4 family
    3.4e-07   30.2   4.4    6.2e-07   29.3   2.4    2.0  2  DAO             FAD dependent oxidoreductase
    8.5e-06   25.9   0.4    2.6e-05   24.3   0.4    1.9  1  NAD_binding_8   NAD(P)-binding Rossmann-like domain
    4.8e-05   22.6   2.4     0.0036   16.4   1.1    2.1  2  FAD_binding_2   FAD binding domain
    5.8e-05   22.3   0.5     0.0004   19.6   0.2    2.0  2  Lycopene_cycl   Lycopene cyclase protein
    6.3e-05   22.3   0.2    9.3e-05   21.8   0.2    1.5  1  Pyr_redox_2     Pyridine nucleotide-disulphide oxidoreductase
    0.00011   21.7   0.2    0.00015   21.3   0.2    1.2  1  FAD_oxidored    FAD dependent oxidoreductase
     0.0054   16.7   1.6     0.0081   16.2   0.1    2.0  3  NAD_binding_9   FAD-NAD(P)-binding
     0.0061   15.5   0.4      0.011   14.6   0.4    1.4  1  Trp_halogenase  Tryptophan halogenase
  ------ inclusion threshold ------
      0.016   15.0   0.0      0.023   14.5   0.0    1.2  1  Chalcone_2      Chalcone isomerase like
      0.023   13.4   0.5      0.035   12.8   0.5    1.3  1  HI0933_like     HI0933-like protein
      0.073   12.1   0.1       0.44    9.6   0.2    2.0  2  GIDA            Glucose inhibited division protein A


Domain annotation for each model (and alignments):
>> Thi4  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  379.2   0.0  3.8e-117  5.7e-114       1     235 []      59     298 ..      59     298 .. 0.99
   2 ?   -3.2   0.0       2.7   4.1e+03      60      79 ..     299     318 ..     299     321 .. 0.80

  Alignments for each domain:
  == domain 1  score: 379.2 bits;  conditional E-value: 3.8e-117
                 HHHHHHHHHHHHHHHTEEEEEEE--SHHHHHHHHHHHHC.TTS-EEEEESSSS--TTTTTTSTTBSEEEEETTTHHHHHHTT---EEESSEEEESEHHH CS
        Thi4   1 sraiveryfedllkyaesDvvivGaGssGLtaayylakk.pdlkvailersvspGGGawlGGqlfsaivvrkpakelLdelgikyedegdyvvvkdaal 98 
                 sra+++ryf dl+kyaesD+vivGaGs+GLtaayyl+++ pdlk+ai+e+sv+pGGGawlGGqlfsa+vvrkpa+++L+e+g++yedeg+yvvvk+aal
  EPX71211.1  59 SRAMTRRYFADLDKYAESDIVIVGAGSAGLTAAYYLGTRrPDLKIAIIEASVAPGGGAWLGGQLFSAMVVRKPADAFLREIGVPYEDEGEYVVVKHAAL 157
                 8************************************999*********************************************************** PP

                 HHHHHHHHHHTSTTEEEEESEEEEEEEEET...B.TEEEEEEEEEHHHHTCTTTSS.-B-EEEEEEEEEE--GSSSTTTTHHHHHHHHCTTTS-----E CS
        Thi4  99 ftstllskvlqlanvkllnavaveDlivre...g.egvaGvvinwtlvelahdtqscvDPlvirakvvvdatGhdgeivavvvkkikleakiekvkgek 193
                 ftst+++++l l+n+kl+na+aveDliv+    g +++aGvv+nwtlv+l+h+ qsc+DP++i+a++v++atGhdg+++a++vk+ +++  i ++++++
  EPX71211.1 158 FTSTVMARALSLPNIKLFNATAVEDLIVKAdedGnQRIAGVVTNWTLVSLNHGLQSCMDPNTINAHLVLSATGHDGPFGAFCVKRAHQAGLIPHLGDMR 256
                 *****************************8787469*************************************************************** PP

                 CB-HHHHHHHHHHHECEEETTEEE-THHHHHHHT-EB--SB- CS
        Thi4 194 sldaekaedaivkktrevvpnlyvaGmevaevdganRmGpif 235
                 +ld++++e+ ivk++re++p+l+v+Gme++e+dganRmGp+f
  EPX71211.1 257 PLDMNRSENLIVKGSREIYPGLVVSGMELSELDGANRMGPTF 298
                 *****************************************9 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 2.7
                 TSTTBSEEEEETTTHHHHHH CS
        Thi4  60 GGqlfsaivvrkpakelLde 79 
                 GG++fs i   ++a ++ +e
  EPX71211.1 299 GGMMFSGIKAAQEALKVFEE 318
                 89999999888888777665 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.3   2.4   4.1e-10   6.2e-07       1      46 [.      77     125 ..      77     139 .. 0.80
   2 ?    0.3   0.0      0.28   4.1e+02     144     201 ..     154     230 ..     142     244 .. 0.62

  Alignments for each domain:
  == domain 1  score: 29.3 bits;  conditional E-value: 4.1e-10
                 EEEEECTSHHHHHHHHHH.HHTT...EEEEESSSSTTSSGGGSSEEEEES CS
         DAO   1 dvviiGGGiiGlstAyeL.arrg...VtllekgdiagsgaSgrnsgllhs 46 
                 d+vi+G+G +Gl++Ay+L +rr+   ++++e++  +g g  +  + l+++
  EPX71211.1  77 DIVIVGAGSAGLTAAYYLgTRRPdlkIAIIEASVAPG-GGAWLGGQLFSA 125
                 9*****************5577789********8888.766666666655 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.28
                 EHHHHHHHHHHHHHHTT.-EEEESECEEEE..EEEE....TCEEEEE.....EECTEEEE............EEEE..EEE--G CS
         DAO 144 dpakltaalaraaealG.veilegtevtgl..eeed....gkvwgve.....rttpgend............aada..vVnaaG 201
                 ++a +t  ++++a +l  +++++ t v++l  ++ d     +++gv      +      +            +++a  v  a+G
  EPX71211.1 154 HAALFTSTVMARALSLPnIKLFNATAVEDLivKA-DedgnQRIAGVVtnwtlV------SlnhglqscmdpnTINAhlVLSATG 230
                 778888888888777744999******9974422.234667777774433331......1222334455555333343555555 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.3   0.4   1.8e-08   2.6e-05       1      33 [.      80     114 ..      80     137 .. 0.89

  Alignments for each domain:
  == domain 1  score: 24.3 bits;  conditional E-value: 1.8e-08
                    EE--SHHHHHHHHHHHCC..TEEEEEE-SSSSSSG CS
  NAD_binding_8   1 IvGaGlsGlvaAylLaka..gfdvlllekrdrlGG 33 
                    IvGaG +Gl+aAy+L  +  ++++ ++e++  +GG
     EPX71211.1  80 IVGAGSAGLTAAYYLGTRrpDLKIAIIEASVAPGG 114
                    9**************7655799********99998 PP

>> FAD_binding_2  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   1.1   2.4e-06    0.0036       1      34 [.      77     112 ..      77     132 .. 0.78
   2 !    5.4   0.0    0.0054       8.1     146     201 ..     161     231 ..     147     252 .. 0.71

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 2.4e-06
                    SEEEE--SHHHHHHHHHHHH..TTT-EEEEESSSGG CS
  FAD_binding_2   1 DviViGsGlAGLaAAleaae..aGlkvavvekeqef 34 
                    D++++G+G AGL+AA+ +      lk+a++e   + 
     EPX71211.1  77 DIVIVGAGSAGLTAAYYLGTrrPDLKIAIIEASVAP 112
                    99*************987553256799999987664 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.0054
                    HHHHHHHTCT.EEEEESEEEEEEEEC...TT..EEEEEEEEET.........TTTCEEEEEESEEEE---- CS
  FAD_binding_2 146 rlvesarkag.vdfqerteadeLive...dg..rvtGavvenp.........esgrevrirakavvlatgG 201
                    +++++a++++ +++++ t++++Liv+   dg  r+ G+v +           + +   +i+a+ v+ atg 
     EPX71211.1 161 TVMARALSLPnIKLFNATAVEDLIVKadeDGnqRIAGVVTNWTlvslnhglqSCMDPNTINAHLVLSATGH 231
                    56677778888**************7433337799999887556666655554444446667777777765 PP

>> Lycopene_cycl  Lycopene cyclase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.2   2.7e-07    0.0004       1      34 [.      77     110 ..      77     123 .. 0.93
   2 ?    0.6   0.0      0.15   2.2e+02      99     142 ..     189     231 ..     159     249 .. 0.81

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 2.7e-07
  Lycopene_cycl   1 DvvviGaGpAglslAarlteakpglkvvlieasp 34 
                    D+v++GaG Agl  A  l   +p+lk+ +ieas 
     EPX71211.1  77 DIVIVGAGSAGLTAAYYLGTRRPDLKIAIIEASV 110
                    9******************************985 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.15
  Lycopene_cycl  99 engvklleakvesveeeeageslvvleggrkirarlvvdargla 142
                    e+g ++  + v++ + ++  + l  + + ++i+a lv+ a+g  
     EPX71211.1 189 EDGNQRIAGVVTNWTLVSLNHGLQSCMDPNTINAHLVLSATG-H 231
                    667777888888888888888889999*************99.3 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.2   6.2e-08   9.3e-05       2      42 ..      77     118 ..      76     232 .. 0.80

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 6.2e-08
                  SEEEE--SHHHHHHHHHHHH..HTS-EEEEETTHCHHHCSHHH CS
                  xxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2   2 dvvviGgGpAGlaaaltlaq..agakvtlvelegtclnggcll 42 
                  d+v++G+G AGl+aa +l++    +k++++ +    ++gg +l
   EPX71211.1  77 DIVIVGAGSAGLTAAYYLGTrrPDLKIAII-EASVAPGGGAWL 118
                  89*****************9656*******.555555555444 PP

>> FAD_oxidored  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.2   9.9e-08   0.00015       1     125 [.      77     200 ..      77     230 .. 0.79

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 9.9e-08
  FAD_oxidored   1 DvvVvGGgpaGvaAA..iaAaraGakvlLveergvlGGlltsglvatdignkaeeqvvtgiareflerlrqrggarlkkrskw..ntfepevakavl 93 
                   D+v+vG+g+aG++AA  +   r + k +++e +   GG +  g+   +   +    vv++ a+ fl+++       ++++ +   + +   +  +v+
    EPX71211.1  77 DIVIVGAGSAGLTAAyyLGTRRPDLKIAIIEASVAPGGGAWLGG--QLFSAM----VVRKPADAFLREIGV--P--YEDEGEYvvVKHAALFTSTVM 163
                   9**************555789***************99877555..555544....89999********55..3..332222222468888899999 PP

  FAD_oxidored  94 eemlaeagvtvllntrlveveke.g....kriesvtv 125
                      l+ ++++++  t +++ +++ +    +ri +v++
    EPX71211.1 164 ARALSLPNIKLFNATAVEDLIVKaDedgnQRIAGVVT 200
                   999999***********77776432334467999887 PP

>> NAD_binding_9  FAD-NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       3.9   5.8e+03      89     103 ..      56      70 ..      51      75 .. 0.82
   2 !   16.2   0.1   5.4e-06    0.0081       1      46 [.      79     121 ..      79     134 .. 0.86
   3 ?   -2.1   0.0       2.3   3.4e+03     140     155 ..     216     231 ..     186     232 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 3.9
  NAD_binding_9  89 dfvpRalyGrYlrdl 103
                    + v+Ra+  rY++dl
     EPX71211.1  56 STVSRAMTRRYFADL 70 
                    679999999999885 PP

  == domain 2  score: 16.2 bits;  conditional E-value: 5.4e-06
  NAD_binding_9   1 aivGaGprGlavlerLlarakkkspleitlfdp.sepgagrvwrtdq 46 
                    +ivGaG +Gl+++  L  r   + +l+i +++    pg g++w   q
     EPX71211.1  79 VIVGAGSAGLTAAYYLGTR---RPDLKIAIIEAsVAPG-GGAWLGGQ 121
                    7******************...6**********44669.***97766 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 2.3
  NAD_binding_9 140 dgaslaadaVvLAlGh 155
                    d +++ a+ V  A+Gh
     EPX71211.1 216 DPNTINAHLVLSATGH 231
                    5578899999999999 PP

>> Trp_halogenase  Tryptophan halogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.4   7.2e-06     0.011       1      36 [.      77     111 ..      77     116 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 7.2e-06
                     EEEEE--SHHHHHHHHHHHHHTTTSSEEEEEE-SSS CS
  Trp_halogenase   1 kivivGGGtaGwlaAaalakalkgklevtlveseei 36 
                     +ivivG+G+aG +aA +l++    +l++ ++e++  
      EPX71211.1  77 DIVIVGAGSAGLTAAYYLGTRRP-DLKIAIIEASVA 111
                     69*****************9994.4******99765 PP

>> Chalcone_2  Chalcone isomerase like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   1.6e-05     0.023     126     193 ..       5      71 ..       2      77 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 1.6e-05
  Chalcone_2 126 eslkefkslFnrkgsvpkgkeLlLerdangeLsvlyedkkkkkleklGrvedervsrllwlnYLagkk 193
                 +++ +f++lFn+   ++ +ke  L ++++ +L+ ++ + + ++  ++  +++  vsr++   Y+a+ +
  EPX71211.1   5 TAVAQFQNLFNA-DPLKVDKEDALVKTEQNALTKSFPNYQLDNEFTFSPIRESTVSRAMTRRYFADLD 71 
                 6899******87.5555555556679999***********************************9865 PP

>> HI0933_like  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.5   2.4e-05     0.035       2      36 ..      77     113 ..      76     121 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2.4e-05
                  SEEEE--SHHHHHHHHHH..HHTT--EEEE-SSSSS- CS
  HI0933_like   2 dviviGgGaAGlmaAisa..akrgkrVlllekakklg 36 
                  d++++G+G AGl aA  +  ++ + +++++e+  ++g
   EPX71211.1  77 DIVIVGAGSAGLTAAYYLgtRRPDLKIAIIEASVAPG 113
                  89**************996567789999999987766 PP

>> GIDA  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.2    0.0003      0.44       1      18 [.      77      94 ..      77     110 .. 0.88
   2 ?    0.1   0.0      0.22   3.3e+02     101     135 ..     163     202 ..     151     236 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.0003
                CEEEE-SSHHHHHHHHHH CS
        GIDA  1 dviViGgGhAGceAAlaa 18
                d++++G+G AG+ AA+ +
  EPX71211.1 77 DIVIVGAGSAGLTAAYYL 94
                79*************976 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.22
                 HHHHHHTSTTEEEEES-.EEEEEECT.....TEEEEEEETT CS
        GIDA 101 vteklenepnleiieee.veelivee.....kkvkgvvted 135
                 + ++l + pn+++++++ ve+liv+      ++++gvvt+ 
  EPX71211.1 163 MARAL-SLPNIKLFNATaVEDLIVKAdedgnQRIAGVVTNW 202
                 33444.45999999864388999877888988999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       447  (0.0249317); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 2278.39
//
Query:       EPX71212.1  [L=379]
Description: t-SNARE component Sec9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    0.00038   20.7   1.1      0.032   14.5   0.4    2.8  2  V-SNARE_C       Snare region anchored in the vesicle membrane
     0.0019   18.5   0.6     0.0019   18.5   0.6    3.6  4  Alanine_zipper  Alanine-zipper, major outer membrane lipoprot
  ------ inclusion threshold ------
       0.21   11.4   2.1       0.23   11.3   0.4    1.9  2  Calici_MSP      Calicivirus minor structural protein
        7.2    5.1  11.7         12    4.4  11.7    1.3  1  Hamartin        Hamartin protein


Domain annotation for each model (and alignments):
>> V-SNARE_C  Snare region anchored in the vesicle membrane C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.4   7.1e-06     0.032      11      43 ..     174     206 ..     168     212 .. 0.87
   2 ?    3.6   0.0     0.018        81      20      46 ..     336     362 ..     324     369 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 7.1e-06
   V-SNARE_C  11 knShrivdetisiGaailedLhsQretLkrars 43 
                 +n+ ++++  ++ G+++l++L++Q e+  +a +
  EPX71212.1 174 RNALQMANNAEQVGMSTLQNLGQQTEKVASAEK 206
                 67889*******************999888766 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.018
   V-SNARE_C  20 tisiGaailedLhsQretLkrarsklh 46 
                 + + ++a+ ++  sQ+ +L+ +++k  
  EPX71212.1 336 LKGLAYATGQEVESQNARLGKIHDKSD 362
                 567899999**************9965 PP

>> Alanine_zipper  Alanine-zipper, major outer membrane lipoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.1       3.1   1.4e+04      33      38 ..      23      28 ..      15      33 .. 0.47
   2 ?    1.1   1.0      0.11   5.1e+02      22      36 ..     171     185 ..     146     193 .. 0.54
   3 !   18.5   0.6   4.3e-07    0.0019      11      66 ..     195     270 ..     188     272 .. 0.87
   4 ?   -1.8   0.0      0.91   4.1e+03      50      66 ..     345     361 ..     340     363 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 3.1
  Alanine_zipper 33 eAaarA 38
                    +Aa++A
      EPX71212.1 23 SAASTA 28
                    333333 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.11
  Alanine_zipper  22 saadeAkskAdeAaa 36 
                     s++ +A + A+ A++
      EPX71212.1 171 SSTRNALQMANNAEQ 185
                     333444444444443 PP

  == domain 3  score: 18.5 bits;  conditional E-value: 4.3e-07
  Alanine_zipper  11 dqaeqdaaaaksaadeAkskAdeAaarAenA....................eaaAeeAqkaAeeaneradrmFeks 66 
                      q ++++a+a+++ d Ak  A+ A+++A++                     + aAeeA  +A++ +er+d ++ ++
      EPX71212.1 195 GQQTEKVASAEKELDVAKIHAKRAEEQARELktlnrsmfaihigkpwgkgkRVAAEEARLTAKREAERQDEILNRQ 270
                     5667889999999999999999999855555999999999********************************9987 PP

  == domain 4  score: -1.8 bits;  conditional E-value: 0.91
  Alanine_zipper  50 kaAeeaneradrmFeks 66 
                     ++ e +n+r+ ++ +ks
      EPX71212.1 345 QEVESQNARLGKIHDKS 361
                     78899999999999998 PP

>> Calici_MSP  Calicivirus minor structural protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1      0.51   2.3e+03     123     150 ..      82     109 ..      60     112 .. 0.69
   2 ?   11.3   0.4     5e-05      0.23      53     149 ..     159     256 ..     146     263 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.51
  Calici_MSP 123 hslatfkngtpfgkpapptaksgrpqat 150
                  s a++   tpfg+  p   ++   q+t
  EPX71212.1  82 RSGAAVAPSTPFGHERPSYQRAPASQTT 109
                 5677888899999999887777666655 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 5e-05
  Calici_MSP  53 ksqleltrdlsinapaarvlsaldaGldevsa.rrlagsGerviwgn..ldrpimhagtmdsirqtrhldslshslatfkngtpfgkpapptaksgrpq 148
                 k ++++ +  s+ +     ++a +a    +s+ + l ++ e+v   +  ld   +ha    +  q+r l +l  s+ +++ g p+gk    +a   r  
  EPX71212.1 159 KQKIQFVKQDSLSSTRNALQMANNAEQVGMSTlQNLGQQTEKVASAEkeLDVAKIHAK--RAEEQARELKTLNRSMFAIHIGKPWGKGKRVAAEEARLT 255
                 4556666666777777778888888766665438899999999887611555556665..5668***********************999888887765 PP

  Calici_MSP 149 a 149
                 a
  EPX71212.1 256 A 256
                 5 PP

>> Hamartin  Hamartin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4  11.7    0.0028        12     366     583 ..      15     257 ..       4     325 .. 0.49

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.0028
    Hamartin 366 sstpeaagkatpetTPakssrkl...ppslsesavv.........valpassrksspprkdeksesskpdlskqeev.enekeleeslk......skss 445
                 ++ pe+   a  ++TPa s  +         +s+           +++p+   +++  r+d    +  p++++ + v +++   +e ++      s+++
  EPX71212.1  15 YKAPEEGSSAASTATPAPSYTSNgysG----NSYPDaysidggyeSSMPKGGYNMQSIRNDPYARKDMPPMRSGAAVaPSTPFGHERPSyqrapaSQTT 109
                 556666555555577777766444431....22222222244444555555555555555555555566666655554444433333334222223333 PP

    Hamartin 446 vtlseLsdvikel.......................leaesedsvekeeeeaaisqelseiteekketlvsrggldspfsrtleslaksqr.rkrlasa 520
                 ++l++     +el                       ++++ + + e++e+ +ai+q+++ ++++    +  r +l+++++ +   ++  q+  ++++  
  EPX71212.1 110 LDLKK-----QELfqgarriqensenylndggeeagMADSYSATAEEDEDVEAIKQKIQFVKQDS--LSSTRNALQMANNAEQVGMSTLQNlGQQTEKV 201
                 33333.....2223333444555556666666666777777777899999999999999999998..55699999999999777777766555555555 PP

    Hamartin 521 lssesisdaegaatkkeaksskeaesslekekscsakqsftpieqklesskdcpadeeesens 583
                  s e+  d+ ++ +k++       e++ ++ k+ + +    +i ++ ++ k+ +a+e++ +++
  EPX71212.1 202 ASAEKELDVAKIHAKRA-------EEQARELKTLNRSMFAIHIGKPWGKGKRVAAEEARLTAK 257
                 55554444444444444.......333333333333333333333333333222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (379 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1396  (0.0778627); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 2854.29
//
Query:       EPX71213.1  [L=896]
Description: phosphatidylethanolamine N-methyltransferase Cho2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-57  191.7  19.0    5.4e-36  123.2   0.7    3.3  4  PEMT      Phospholipid methyltransferase
    0.00028   21.4   0.9      0.002   18.6   0.2    2.7  2  SKICH     SKICH domain
     0.0042   16.9   0.5      0.009   15.8   0.1    1.8  2  HECW_N    N-terminal domain of E3 ubiquitin-protein ligase HE


Domain annotation for each model (and alignments):
>> PEMT  Phospholipid methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.6   9.3e+03      61      85 ..     203     227 ..     175     231 .. 0.71
   2 !   79.4   3.3   3.8e-26   2.3e-22       2     105 ..     238     341 ..     237     342 .. 0.97
   3 ?   -2.6   0.3       1.2   7.3e+03      14      50 ..     382     413 ..     378     416 .. 0.60
   4 !  123.2   0.7     9e-40   5.4e-36       1     104 [.     486     590 ..     486     591 .. 0.98

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.6
        PEMT  61 lgflGlaLitgsaaglllallvllv 85 
                   f+ l L+ +++  +l+al ++ +
  EPX71213.1 203 RHFVDLILMCDFCSYVLMALAWTCW 227
                 3467778888888888888888865 PP

  == domain 2  score: 79.4 bits;  conditional E-value: 3.8e-26
        PEMT   2 rlilGlllialglllvlssiealgefgtfygdfFlelmdklvtsGiYrylnnPeyvgstlgflGlaLitgsaaglllallvllvylialkfvEephlak 100
                 r++ G++li++++++ l +++ +++  ++ gdfF+ l+++lv +G++++  +P+y  +++g++G++Li+gs+ +ll++++++++ +++l +vE+ph++k
  EPX71213.1 238 RFFGGIALIIFNYWVKLDAHRVVRDYAWYWGDFFFLLSSSLVFNGVFELAPHPMYSIGYAGYYGMSLISGSYGVLLASMVAHAAQFVFLVVVENPHIEK 336
                 7889*********************************************************************************************** PP

        PEMT 101 iYgkr 105
                  Yg +
  EPX71213.1 337 TYGSE 341
                 **975 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 1.2
        PEMT  14 lllvlssiealgefgtfygdfFlelmdklvtsGiYry 50 
                 ++ ++s++++l   + +y++f       l +++++r+
  EPX71213.1 382 IIAAYSILSSLLSSNSYYNQFWA-----LFQAFVWRF 413
                 55666777777777777777633.....555555555 PP

  == domain 4  score: 123.2 bits;  conditional E-value: 9e-40
        PEMT   1 lrlilGlllialglllvlssiealgefgtfygdfFlelmd.klvtsGiYrylnnPeyvgstlgflGlaLitgsaaglllallvllvylialkfvEephl 98 
                 lr++lG++li+l++++++s++e+lg+ g+fygdfFl++ + klv++GiYry+nnPe+++++ +++GlaLi++sa+++lla+l++l +l+++++vE+ph+
  EPX71213.1 486 LRHTLGFALIVLHIYTSVSIYEDLGQYGWFYGDFFLPSRSpKLVYQGIYRYVNNPERFLGCSAYWGLALISNSAWIFLLATLAQLSNLAIIRLVEQPHM 584
                 5899********************************99889********************************************************** PP

        PEMT  99 akiYgk 104
                 +k+Yg+
  EPX71213.1 585 RKVYGN 590
                 ****97 PP

>> SKICH  SKICH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.39   2.3e+03      21      35 ..      88     102 ..      79     104 .. 0.86
   2 !   18.6   0.2   3.4e-07     0.002      27     103 .]     711     802 ..     691     802 .. 0.80

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.39
       SKICH  21 tltkdfkpsskDwiG 35 
                 t++++++++ +Dw+ 
  EPX71213.1  88 TIDPRVPKTPWDWVV 102
                 6889999******95 PP

  == domain 2  score: 18.6 bits;  conditional E-value: 3.4e-07
       SKICH  27 kpsskDwiGlfkvgfkslkdyvtyvwv.................keeeeeeseeekqvlfkaselpkeekeeeYqlvYvs.kkgsvlGvsepFqf 103
                   + +DwiGl++v  ++++d +t v                   + ++ +e+++  +++f+ + l  e+  ++Y + Y   +k+ v++ sepFq+
  EPX71213.1 711 DHEYNDWIGLYRV-SDNISDIHTQVPSegrwsavdhkgynshtsSITQVSETKDSGEIVFSRELLFWEP--GTYEFRYHHsNKHLVMAKSEPFQI 802
                 56779********.6889998888755566669999888887765567778888889999766666665..8*******99999*********97 PP

>> HECW_N  N-terminal domain of E3 ubiquitin-protein ligase HECW1 and 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.1   1.5e-06     0.009      17      75 ..     687     747 ..     679     771 .. 0.73
   2 ?   -4.2   0.0       2.4   1.4e+04      96     115 ..     783     802 ..     779     803 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1.5e-06
      HECW_N  17 LtvskneltlgksqslvisWDikeevdaeDWiGlylidetnsenfldykn..rgvngtrkG 75 
                 L ++ ++  ++    + + W    + + +DWiGly+++++ s+   ++ +  r   + +kG
  EPX71213.1 687 LNLDIEDSKVPLGYPIRVKWAAPSDHEYNDWIGLYRVSDNISDIHTQVPSegRWSAVDHKG 747
                 55555555666678999*********************99887655543311444555555 PP

  == domain 2  score: -4.2 bits;  conditional E-value: 2.4
      HECW_N  96 FkYYhgvsgaLrAttpsitv 115
                 F+Y h+    + A +  +++
  EPX71213.1 783 FRYHHSNKHLVMAKSEPFQI 802
                 99999988888887776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (896 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       705  (0.0393218); expected 358.6 (0.02)
Passed bias filter:                      492  (0.0274416); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.76u 0.28s 00:00:01.04 Elapsed: 00:00:00.46
# Mc/sec: 5838.30
//
Query:       EPX71214.1  [L=1473]
Description: DEP domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     7e-110  366.6   0.0   1.2e-109  365.9   0.0    1.4  1  IML1      Vacuolar membrane-associated protein Iml1
    9.8e-21   73.6   0.0    2.6e-20   72.2   0.0    1.8  1  DEP       Domain found in Dishevelled, Egl-10, and Pleckstrin


Domain annotation for each model (and alignments):
>> IML1  Vacuolar membrane-associated protein Iml1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  365.9   0.0  1.3e-113  1.2e-109       2     286 .]     122     423 ..     121     423 .. 0.94

  Alignments for each domain:
  == domain 1  score: 365.9 bits;  conditional E-value: 1.3e-113
        IML1   2 elvfkdqylsrsdmwrlsselvetcvykgqkisflgsiratvkeiykkgkkvksgyisekTkiifRSesarvvlliqlsrEmwdfeedgellfekvvng 100
                  ++f+dq++srsdmwrls++l +tcvy++q++ flg+++ ++ +i+k+gkk+ks+y++e+T++ifRSesa+++++iq+s+Emw+feedgel ++k+++g
  EPX71214.1 122 VIFFRDQFISRSDMWRLSRTLCDTCVYQKQRVYFLGNVQGEIGSIWKNGKKCKSAYFTENTRPIFRSESAKFLIFIQMSEEMWHFEEDGELNYNKAIDG 220
                 589************************************************************************************************ PP

        IML1 101 flpelFkkWkelktkHlvtivlfsrveyde...............keleeeaeealkedekgrlykDfykvvvdeessedwkeileelkkefakfkrdi 184
                 flp+lF+ W++l+++Hl++i+lf+rvey +               +++++ ++++ ++ e+g  ykDf+kvvvd++ss+dw+ +l++lk e+akfk+++
  EPX71214.1 221 FLPDLFSLWRDLGAHHLISIILFTRVEYGNhgsmcvwrpdstglnQRIKQLSHSSPNDIEEGGPYKDFFKVVVDNVSSRDWQPTLANLKVELAKFKENV 319
                 ***************************9667888888888877765555555555556688888*********************************** PP

        IML1 185 llekeekee..kkkrlkgeistaaegniLeainlalnllekhyidrdLkrtgtsiivitpGtGvfevdkellkltterlldngiglDlvclskapLhsv 281
                 l++k  +e   + + ++g+++ ++egn+Le+in+a+ +++++yidrdL+rtgtsiiv+tpG+G++evd+++l+lt+++ll++ +g+D+v+l+k pL+++
  EPX71214.1 320 LVQKIINEFgnEVDYVCGRMTASQEGNFLEVINMAVYQFQSDYIDRDLSRTGTSIIVVTPGSGLYEVDEKMLHLTSKSLLNTVVGMDIVSLGKVPLFQT 418
                 ***986665668899************************************************************************************ PP

        IML1 282 PLfry 286
                 P++ry
  EPX71214.1 419 PVLRY 423
                 ***99 PP

>> DEP  Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.2   0.0     3e-24   2.6e-20       1      72 []    1105    1175 ..    1105    1175 .. 0.98

  Alignments for each domain:
  == domain 1  score: 72.2 bits;  conditional E-value: 3e-24
                  SS-SCEEECTTEEESSE-HHHHHHHHHHHHTS.SSSHHHHHHHHHHHHHCTSCECSSSSHCC--SSSSS-EEE CS
         DEP    1 gvklkdrrkhlktypncftGseavdWLldnld.iedreeAvalgqlLldqgliehvedkhqeFrdskqafYqf 72  
                  g+k+ d ++h+++y+ncf+Gse v+W+++ +  i +reeA+ +g++Ll++glieh+ +kh  + d+ +++Y++
  EPX71214.1 1105 GLKIDDITWHYRVYENCFLGSEFVSWIVNTFIeINNREEALVFGNKLLKNGLIEHIRKKHP-LLDG-HYVYRL 1175
                  78999********************************************************.****.9***95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1473 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       549  (0.0306208); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.96u 0.34s 00:00:01.30 Elapsed: 00:00:00.58
# Mc/sec: 7651.52
//
Query:       EPX71215.1  [L=348]
Description: serine/threonine protein phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.6e-35  122.3   0.0    4.9e-35  121.9   0.0    1.2  1  Metallophos    Calcineurin-like phosphoesterase
  ------ inclusion threshold ------
      0.036   14.3   0.0      0.059   13.6   0.0    1.4  1  Metallophos_2  Calcineurin-like phosphoesterase superfamily d
      0.082   13.3   0.2        7.7    6.9   0.0    2.4  2  TbpB_C         C-lobe handle domain of Tf-binding protein B
      0.095   12.7   0.1       0.14   12.2   0.1    1.1  1  INO80_Ies4     INO80 complex subunit Ies4


Domain annotation for each model (and alignments):
>> Metallophos  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.9   0.0   1.1e-38   4.9e-35       2     201 ..      47     238 ..      46     241 .. 0.95

  Alignments for each domain:
  == domain 1  score: 121.9 bits;  conditional E-value: 1.1e-38
                  EEEEEESBTBTTCCTHHHHHHHHHHHH.HHHTTESEEEEESTSSSSS..HHHHHHHHHHHHHHHHTSEEEEEC-TTS........CHHHHHHHHHHHH CS
  Metallophos   2 rilvigDlHlalgggqlddllkllddl.lreekpdlvllaGDlvdrg..dlekellellaalvkypipvylllGNHe........gfeeellnkygyl 88 
                  +++++gD+H     gql+d l+l++    ++e  +++l  GD+vdrg  ++e+ +l ll+ + kyp+ + l++GNHe        gf++e+ +ky + 
   EPX71215.1  47 PVTICGDIH-----GQLHDMLELFRIGgSCPETKYVFL--GDFVDRGfySVET-FLLLLTLKCKYPDSITLIRGNHEsrqitqvyGFYDECVRKYSS- 135
                  799******.....**********88787888******..*******988899.88889***********************************998. PP

                  HHHHHHHEHHHCEEETSEEEEEETTEEEEEEEESE.CEEETHHHHHHHHHHHSCHHHHCC...HHHHHHHHHHTTCSEEEEEESSESSCSSSCSCCHH CS
  Metallophos  89 gifsepwrsdaevfnnlplaslgsgslkvlllhGg.spellvsldklgslnleleapepg...dewlkdlekrekadwvivlgHsplyrgsgylfgde 182
                     +++wr+++evf++l l + +++  kvl++hGg sp + +sld+++ +++ +e+p++g   d++++d        +  + g+   +rg+g lfg++
   EPX71215.1 136 ---ANVWRYCCEVFDYLSLGAVIDD--KVLCVHGGlSPSI-TSLDQIRLIDRKQEVPHEGamcDLLWSD--------PEDISGWGLSPRGAGFLFGSD 219
                  ...889*******************..********77777.****************************........*******9999********** PP

                  HHHHHHHHTTESEEEEESS CS
  Metallophos 183 aledllkkygvdlvisGHt 201
                  ++e +   +++  v ++H+
   EPX71215.1 220 VAEAFNHGNNLSFVARAHQ 238
                  *****99999********7 PP

>> Metallophos_2  Calcineurin-like phosphoesterase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.3e-05     0.059       4      71 ..      49     130 ..      47     186 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.3e-05
  Metallophos_2   4 aiiSDlHsnldaleavlealkevgvdaiihaGDleeeepevleellela........pvlaVrGNnD.....eev..veedvl 71 
                     i  D+H++l+   +++++  ++   + +++GD+ ++ + ++e++l l+         ++ +rGN++     + v  + +++ 
     EPX71215.1  49 TICGDIHGQLHDMLELFRIGGSCPETKYVFLGDFVDRGFYSVETFLLLLtlkckypdSITLIRGNHEsrqitQ-VygFYDECV 130
                    6889*******************88999*****9666666888888888888999************655531.123333332 PP

>> TbpB_C  C-lobe handle domain of Tf-binding protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.1     0.014        64      64      79 ..     140     155 ..     108     160 .. 0.84
   2 ?    6.9   0.0    0.0017       7.7      18      52 ..     229     263 ..     219     295 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.014
                 EEE-TT-SSEEEEEEE CS
      TbpB_C  64 evccsnLeYlkfGkls 79 
                   cc+ ++Yl +G + 
  EPX71215.1 140 RYCCEVFDYLSLGAVI 155
                 57***********986 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0017
                 E-B--S-TTEEEETTEEEES-------EEEEEE-- CS
      TbpB_C  18 eldnFgnaakLvidgkeipLlpedttaktefiktv 52 
                 +l+    a++Lv++g +i   ++d++++++f ++ 
  EPX71215.1 229 NLSFVARAHQLVMEGYKIHFSEKDKENSRKFSEQD 263
                 56666789***************999999998764 PP

>> INO80_Ies4  INO80 complex subunit Ies4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1     3e-05      0.14      60      91 ..     253     284 ..     230     296 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 3e-05
  INO80_Ies4  60 apaakaeskadnasdsnsatPaegtPapssaa 91 
                 + ++++ s++d +sds++++P ++tPap+ ++
  EPX71215.1 253 KENSRKFSEQDFSSDSDPQSPYDDTPAPGDTV 284
                 333444499*******************9844 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (348 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       386  (0.0215294); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.45u 0.28s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 2396.57
//
Query:       EPX71216.1  [L=244]
Description: glutaredoxin Grx4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.2e-18   64.7   0.1    1.1e-17   63.9   0.1    1.4  1  Thioredoxin    Thioredoxin
    2.2e-16   59.8   0.0    9.2e-16   57.8   0.0    2.0  2  Glutaredoxin   Glutaredoxin
      2e-05   25.0   0.0    0.00027   21.3   0.0    2.4  1  Thioredoxin_2  Thioredoxin-like domain
    0.00064   20.0   0.0       0.36   11.2   0.0    2.5  2  Thioredoxin_8  Thioredoxin-like
  ------ inclusion threshold ------
      0.022   14.9   0.1      0.054   13.7   0.1    1.7  1  Thioredoxin_7  Thioredoxin-like
      0.039   13.8   0.1        3.3    7.5   0.2    2.5  2  TraF           F plasmid transfer operon protein
      0.086   12.6   0.0       0.17   11.7   0.0    1.4  1  DIM1           Mitosis protein DIM1


Domain annotation for each model (and alignments):
>> Thioredoxin  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.9   0.1   4.3e-21   1.1e-17       6     102 ..       7     102 ..       2     103 .. 0.94

  Alignments for each domain:
  == domain 1  score: 63.9 bits;  conditional E-value: 4.3e-21
                  SHHHHHHHHTT.TSSEEEEEEE-TTSHHHHCHHHHHHHHHHHCTTTSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTEEEEEEESS-HHHHHHHHHH CS
  Thioredoxin   6 tkenFeeevak.ekklvlveFyApwCghCkalaPeleklaeelkdkvklakvdvdenedlakkyevegiPtlklfkngkevkkyegarekeklaaflk 102
                  + ++F+e ++k +++ +l++FyApw ++C++++ +++++a+++  + +++k+++++ +d+a+ ++v+++P ++l++  k  ++++ga++ +kl++ ++
   EPX71216.1   7 SIDQFQEILQKdNEQAILLNFYAPWAAPCQQMNQVFDQFAKDTP-EATFLKIEAEKFSDIAESFDVTAVPLFVLIHGQKVLARISGANP-QKLKSAID 102
                  5679******978899****************************.9*******************************************.99999987 PP

>> Glutaredoxin  Glutaredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       1.1   2.8e+03      12      51 ..      35      75 ..      33      83 .. 0.56
   2 !   57.8   0.0   3.6e-19   9.2e-16       1      60 []     160     224 ..     160     224 .. 0.98

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 1.1
                  HHHHHHHHHHTTGG...EEEEEGCCSHHHHHHHHHHHTSSSSS CS
  Glutaredoxin 12 CkkakrlLkelgvk...feeidvdkdeeireelkelsgvrtvP 51
                  C+++ ++++++  +    ++  +++  e   ++ e  +v +vP
    EPX71216.1 35 CQQMNQVFDQFAKDtpeATFLKIEA--EKFSDIAESFDVTAVP 75
                  7777777777775542223333333..4444444555666666 PP

  == domain 2  score: 57.8 bits;  conditional E-value: 3.6e-19
                   EEEEES.....TSSHHHHHHHHHHHHTTGGEEEEEGCCSHHHHHHHHHHHTSSSSSEEEETTEEE CS
  Glutaredoxin   1 vvlftk.....ptCpyCkkakrlLkelgvkfeeidvdkdeeireelkelsgvrtvPqvfidgkhv 60 
                   ++lf+k     p C++++k +  L+e++v++ ++++++d+++r+ lk +s+++t+Pq++i+g++v
    EPX71216.1 160 IMLFMKgtpsePACGFSRKLVGMLRERNVQYGFFNILADDAVRQSLKVFSDWPTFPQLYIKGEFV 224
                   799************************************************************97 PP

>> Thioredoxin_2  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.0   1.1e-07   0.00027       2     103 ..      17      96 ..      16     101 .. 0.86

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 1.1e-07
  Thioredoxin_2   2 kgngkpvlvvftdpdCpyCkklkkelkelddvtvrvllfplkpsfepkavaiwcakekkkafkdieenvelarkygvrgtPtivfldgkeivarlp 97 
                    k n++ +l+ f++p+   C+++++++++             k+  e+ + +i  +k             + a++++v+++P +v++ g++++ar+ 
     EPX71216.1  17 KDNEQAILLNFYAPWAAPCQQMNQVFDQF-----------AKDTPEATFLKIEAEKFS-----------DIAESFDVTAVPLFVLIHGQKVLARIS 90 
                    67999*******************99999...........566666677777777766...........59************************* PP

  Thioredoxin_2  98 Gyvpae 103
                    G+ p++
     EPX71216.1  91 GANPQK 96 
                    **8764 PP

>> Thioredoxin_8  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0   0.00014      0.36       3      31 ..      22      50 ..      19      57 .. 0.87
   2 !    9.2   0.0    0.0006       1.5      54      92 ..      45      83 ..      43      86 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00014
                   EEEEEE--SSSHHHHHHHHHHHHHHHHHH CS
  Thioredoxin_8  3 vvlLyfgaswcppckaftpklkelyeklk 31
                    +lL f+a w +pc+++++  +++ ++  
     EPX71216.1 22 AILLNFYAPWAAPCQQMNQVFDQFAKDTP 50
                   689*********************99876 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.0006
                   GGGS-TTSEE.EE-TT-HHHHTT-S--TT-SEEEEE-TT CS
  Thioredoxin_8 54 lkknkkpwlsvpfddkkrnklkkkynvkaiPtlvvldkn 92
                   ++k+ ++ +++  + +k + +++ ++v+a+P +v+++ +
     EPX71216.1 45 FAKDTPEATFLKIEAEKFSDIAESFDVTAVPLFVLIHGQ 83
                   6777788899999999********************876 PP

>> Thioredoxin_7  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   2.1e-05     0.054      15      41 ..      18      44 ..      13      80 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 2.1e-05
                   HHT--EEEEE--TT-HHHHHHHHHHHH CS
  Thioredoxin_7 15 ergkpvlvffgaswcftCqalerdfls 41
                    +++ +l++f a w  +Cq ++++f +
     EPX71216.1 18 DNEQAILLNFYAPWAAPCQQMNQVFDQ 44
                   67899*******************987 PP

>> TraF  F plasmid transfer operon protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.2    0.0013       3.3     121     201 ..      12      82 ..       6      90 .. 0.74
   2 ?    3.5   0.0     0.021        54     117     159 ..     144     191 ..     129     204 .. 0.72

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0013
        TraF 121 eaalkklakeygLlfFyrgkcpyceaqapilqafadky.glevraVsvdgrplpelpnarvdkgqaarlgvkrtPalvlvdp 201
                 +++l+k  +++ Ll Fy++    c+++ ++ ++fa+++ + + +   ++ + + +          a+ + v+ +P +vl++ 
  EPX71216.1  12 QEILQKDNEQAILLNFYAPWAAPCQQMNQVFDQFAKDTpEATFLK--IEAEKFSD---------IAESFDVTAVPLFVLIHG 82 
                 67899999999************************9883334443..44333322.........344777777777777765 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.021
        TraF 117 keekeaalkklakeygLlfFyrgk.....cpyceaqapilqafadkyg 159
                 + e++  l++l + + +++F++g+     c+++++++ +l++ + +yg
  EPX71216.1 144 DVETDNRLRTLTNAHDIMLFMKGTpsepaCGFSRKLVGMLRERNVQYG 191
                 56788999************9854442225555555555555555555 PP

>> DIM1  Mitosis protein DIM1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   6.5e-05      0.17       8     104 ..       8     102 ..       3     108 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 6.5e-05
                 HHHHHHHHHH-SSSEEEEEEE-TT-HHHHHHHHHHHHHHHHTTTTEEEEEEETTT--TTSCCCTT-.SSSEEEEEETTEEEEEE-SSS--SSB-S--- CS
        DIM1   8 keevdqailseeerlvviRFGrdedaeClklDelLakiaeklknfaviylvdidevpdfnkmyele.dpvtilffyrnkhmkvDfgtgdnnKlnfvle 104
                  ++ ++ +++++e+ +++ F   + a C +++++  + a++  + a++  ++ ++ +d  + ++++  p+ +l++  ++++   ++ ++ +Kl+ +++
  EPX71216.1   8 IDQFQEILQKDNEQAILLNFYAPWAAPCQQMNQVFDQFAKDTPE-ATFLKIEAEKFSDIAESFDVTaVPLFVLIH--GQKVLARISGANPQKLKSAID 102
                 5566677899999**************************99876.788899**************9778777776..999999999999999988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       480  (0.0267723); expected 358.6 (0.02)
Passed bias filter:                      451  (0.0251548); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 1686.49
//
Query:       EPX71217.1  [L=198]
Description: hypothetical protein SOCG_01435 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-58  197.6   0.2    1.6e-58  197.4   0.2    1.0  1  Nt_Gln_amidase   N-terminal glutamine amidase
      0.008   16.4   0.1      0.014   15.7   0.1    1.4  1  Gln_deamidase_2  Glutaminase


Domain annotation for each model (and alignments):
>> Nt_Gln_amidase  N-terminal glutamine amidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  197.4   0.2   1.8e-62   1.6e-58       1     184 []       7     194 ..       7     194 .. 0.92

  Alignments for each domain:
  == domain 1  score: 197.4 bits;  conditional E-value: 1.8e-62
  Nt_Gln_amidase   1 ytscYcEENvyklaeklaeekeaaeeaelfvvfisnekktvplwkqkaskeadelviWdYhvillaeekekekeetlvyDlDsklpfpvsleeYl 95 
                     ytscYcEEN+y+lae++++ek  +   +++vvf+s+ +kt+p+w+q++s     +viWdYhv+ll+++ ++ ke ++v+D D++l++p+sle+Yl
      EPX71217.1   7 YTSCYCEENIYQLAEHVVKEKPPQ--LQAYVVFLSTPTKTMPIWEQSKS----PFVIWDYHVVLLTRSLKNPKEGWFVWDPDTRLSIPCSLEQYL 95 
                     9******************99865..46******************999....7***************************************** PP

  Nt_Gln_amidase  96 ektlreeeklkpe...........lqrlfrvieakeylkkfasDRshmleedgkwlappPeyepiaakkgvknnLeefidmses...eklGevvs 176
                     e++lr++ ++ p            ++r++rvi+a++++++f sDRshm++ +g+wl+ppP+y++i    g+++nL+++++++e+   + +G v+s
      EPX71217.1  96 EQALRRDLEHLPGqplvygnlcyeTNRKYRVIDANTFVQHFGSDRSHMKTDTGEWLSPPPSYPCI----GKRMNLSQYTNVNEKkngTIFGIVYS 186
                     *****77633333355666666669****************************************....889***********999988****** PP

  Nt_Gln_amidase 177 eeeleerf 184
                     e+e++++f
      EPX71217.1 187 EDEFRQKF 194
                     ****9988 PP

>> Gln_deamidase_2  Glutaminase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.1   1.5e-06     0.014      20     103 ..       6      95 ..       2      98 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1.5e-06
  Gln_deamidase_2  20 kyaddgCyarAhlmarlaeeegiepekifvegklevqtksa......gegkvsWeyHVApvvvvkkekkveklviDpslfse.pvtvkeWl 103
                      +y+   C++    +a++  +e+    +++v   l+++tk++      ++  v W+yHV ++ +  k+ k+ ++v Dp    + p ++++ l
       EPX71217.1   6 QYTSCYCEENIYQLAEHVVKEKPPQLQAYV-VFLSTPTKTMpiweqsKSPFVIWDYHVVLLTRSLKNPKEGWFVWDPDTRLSiPCSLEQYL 95 
                      666667777777777555555555555665.23444444444444449999***********999998999******99988888888766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       478  (0.0266607); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.35s 00:00:00.91 Elapsed: 00:00:00.55
# Mc/sec: 1093.54
//
Query:       EPX71218.1  [L=129]
Description: siva family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00065   19.4  18.7    0.00086   19.0  18.7    1.2  1  Siva      Cd27 binding protein (Siva)


Domain annotation for each model (and alignments):
>> Siva  Cd27 binding protein (Siva)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0  18.7   4.8e-08   0.00086     108     169 ..      61     124 ..      36     127 .. 0.80

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 4.8e-08
        Siva 108 asiacsscvrsvddka...vcsqcerllckqcvrtcsscsalacslctlvdysdeyekvlctscs 169
                 + + c +c +  ++++    c  c++  c  c+r c  c + +cs c+  +      +++c sc 
  EPX71218.1  61 MVKLCHVCYKKTTSRTrvaFCEYCKKSTCCICLRECLNCESTVCSRCSKEER-TFDSETYCLSCV 124
                 5678999999877775222799999***********************9999.4556799*9995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1082  (0.0603492); expected 358.6 (0.02)
Passed bias filter:                      207  (0.0115455); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.27s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 912.82
//
Query:       EPX71219.1  [L=65]
Description: cytochrome C oxidase copper chaperone Cox17 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.5e-22   78.1   6.0    5.2e-22   77.9   6.0    1.1  1  COX17     Cytochrome C oxidase copper chaperone (COX17)


Domain annotation for each model (and alignments):
>> COX17  Cytochrome C oxidase copper chaperone (COX17)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.9   6.0   2.9e-26   5.2e-22       1      48 []      18      65 .]      18      65 .] 0.95

  Alignments for each domain:
  == domain 1  score: 77.9 bits;  conditional E-value: 2.9e-26
       COX17  1 eklKpCCaCpetKkaRDeCilesgaeeekCkelieahkaCmrslGFkv 48
                ek+KpCCaCpetK+aRD+C+l+ ++ + +C++lieah++Cm+++G+kv
  EPX71219.1 18 EKPKPCCACPETKQARDQCMLNTENGAIDCAQLIEAHRQCMAQYGYKV 65
                699********************96666******************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       488  (0.0272185); expected 358.6 (0.02)
Passed bias filter:                      173  (0.00964917); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.28s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 487.05
//
Query:       EPX71220.1  [L=272]
Description: hypothetical protein SOCG_01438 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.045   13.6   0.8      0.059   13.2   0.8    1.2  1  FA_desaturase  Fatty acid desaturase
       0.36   10.9   8.8       0.58   10.3   8.8    1.3  1  DUF4870        Domain of unknown function (DUF4870)
        3.2    6.4   5.9        4.5    5.9   5.9    1.3  1  DUF2207        Predicted membrane protein (DUF2207)
        4.4    6.6   5.0        6.3    6.1   5.0    1.3  1  TMEM43         Transmembrane protein 43


Domain annotation for each model (and alignments):
>> FA_desaturase  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.8   1.3e-05     0.059      88     178 ..     108     194 ..      93     225 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.3e-05
  FA_desaturase  88 rfeglfryllrlllgllvlg.wllalvlglwlrrlarrrapsksrrrkwrllawlllllawlglwlalllllglall..lwlvplllllfllal 178
                    r+++  + +l++ l+   +  ++++     +++ +   ++++k++   w  ++++++l+  +++++++l++ +l++   ++l+pl+l +++  +
     EPX71220.1 108 RRQENEALRLGWCLIGSIILnFFFS-----YKYLVPFIKESMKEYVLLWFQITVAAVLV--IVAFYMFLFVCSLSVDfiVILIPLVLSGITSLF 194
                    4444445555555555544434333.....77888888888888887788888888888..788888888888877787889998888876544 PP

>> DUF4870  Domain of unknown function (DUF4870)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   8.8   0.00013      0.58      24      93 ..     122     201 ..     114     210 .. 0.66

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00013
     DUF4870  24 ilPlvi..wllkkdksefvdeqgkea..lNFqislliysiilivlsllvligf...ll...lllllllllnlvlviiaai 93 
                 i+ +++  ++++k  ++f++e  ke+  l Fqi++  +++i+++ ++l+++++   ++   + l+l ++ +l+  ii a+
  EPX71220.1 122 IGSIILnfFFSYKYLVPFIKESMKEYvlLWFQITVAAVLVIVAFYMFLFVCSLsvdFIvilIPLVLSGITSLFSGIISAV 201
                 5555551155667779********974479******99888888877887766443112223335555666666666555 PP

>> DUF2207  Predicted membrane protein (DUF2207)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   5.9     0.001       4.5     377     438 ..     141     202 ..     102     209 .. 0.79

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.001
     DUF2207 377 kkklkklsalglgliilglilillallllvlllvfllilllillliaiivlllfsrllgrrt 438
                 k+ +k++ +l++ ++++++++i+++ ++l++++    +++++++l++++++ lfs+++++ t
  EPX71220.1 141 KESMKEYVLLWFQITVAAVLVIVAFYMFLFVCSLSVDFIVILIPLVLSGITSLFSGIISAVT 202
                 55667777777777777777777777777777999999999999999999999999999887 PP

>> TMEM43  Transmembrane protein 43
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   5.0    0.0014       6.3     177     239 ..     141     204 ..     109     208 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0014
      TMEM43 177 keksenklltwllRllGfllmflglllllsplsvlvslipllgelvglgla.lvalllslslsl 239
                 ke+ ++ +l w+   ++ +l++++++++l + s  v++i +l  lv  g+  l++ ++s++ s 
  EPX71220.1 141 KESMKEYVLLWFQITVAAVLVIVAFYMFLFVCSLSVDFIVILIPLVLSGITsLFSGIISAVTSA 204
                 6777888999***************************999986666665544666666666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       934  (0.0520944); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.45u 0.30s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 1907.88
//
Query:       EPX71221.1  [L=167]
Description: hypothetical protein SOCG_01439 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.023   13.5   0.1      0.024   13.4   0.1    1.1  1  DUF2207        Predicted membrane protein (DUF2207)
      0.096   12.5   0.0      0.096   12.5   0.0    2.2  2  Synaptobrevin  Synaptobrevin


Domain annotation for each model (and alignments):
>> DUF2207  Predicted membrane protein (DUF2207)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   2.6e-06     0.024     354     430 ..      49     126 ..       2     154 .. 0.63

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 2.6e-06
     DUF2207 354 kkalkkwksavkkkergyfdkkgkkklkklsalglgliilglilillallllvll.lvfllilllillliaiivlllf 430
                  +a ++ +++v+++++  +++++ ++ ++++++ ++l+  +++l++++ + + +  + f+ + ++ ++ i+i++l ++
  EPX71221.1  49 GSAQNSAQESVDNTRSDPLTNEKWWENFSIGTATIILFYNVVCLVIIFGYKVSPYsIAFYWLAAISIGSIFIFLLTIL 126
                 567888999999988888899988998899988888888888888777777555332222222233333333333332 PP

>> Synaptobrevin  Synaptobrevin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.1e-05     0.096      33      82 ..      44      95 ..      39     100 .. 0.69
   2 ?   -2.1   2.4      0.37   3.3e+03      71      84 ..     113     126 ..     106     129 .. 0.41

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.1e-05
                   HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHTX...XXXXXXXXXXXXXXXX CS
  Synaptobrevin 33 ldeLvdktenLqssaqqFkkqarklkrkmwwknm...kliiililvvlilili 82
                   l++ +  ++n ++++ + ++++  l ++ ww+n+     +iil++ v++l++i
     EPX71221.1 44 LEMADGSAQNSAQESVD-NTRSDPLTNEKWWENFsigTATIILFYNVVCLVII 95
                   66666777777777777.678999**********5544455555555555544 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.37
                    XXXXXXXXXXXXXX CS
  Synaptobrevin  71 ililvvlililiii 84 
                    i i+ ++i++l i+
     EPX71221.1 113 ISIGSIFIFLLTIL 126
                    22333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       948  (0.0528752); expected 358.6 (0.02)
Passed bias filter:                      537  (0.0299515); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.47
# Mc/sec: 1073.49
//
Query:       EPX71222.1  [L=199]
Description: hypothetical protein SOCG_01440 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       874  (0.0487478); expected 358.6 (0.02)
Passed bias filter:                      500  (0.0278878); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.30s 00:00:00.77 Elapsed: 00:00:00.47
# Mc/sec: 1273.42
//
Query:       EPX71223.1  [L=101]
Description: DUF1674 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.7e-16   59.3   2.7    6.3e-16   58.6   2.7    1.6  1  DUF1674   Protein of unknown function (DUF1674)


Domain annotation for each model (and alignments):
>> DUF1674  Protein of unknown function (DUF1674)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.6   2.7   3.5e-20   6.3e-16      13      50 .]      57     101 .]      29     101 .] 0.84

  Alignments for each domain:
  == domain 1  score: 58.6 bits;  conditional E-value: 3.5e-20
     DUF1674  13 a........pefegdvnpktgEigGpkgpEPtRygDWeykGrvsDF 50 
                           +feg+vnp+tgE+gGp ++EPt +gD++y+Grv+DF
  EPX71223.1  57 VdvaqrtrfHDFEGNVNPETGEVGGP-KKEPTIHGDYSYGGRVTDF 101
                 14555567789***************.******************* PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       481  (0.026828); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.31s 00:00:00.75 Elapsed: 00:00:00.47
# Mc/sec: 643.73
//
Query:       EPX71224.1  [L=448]
Description: tubulin beta Nda3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.8e-67  225.3   0.0    1.9e-66  224.0   0.0    1.6  2  Tubulin          Tubulin/FtsZ family, GTPase domain
    8.5e-41  139.1   0.0    1.5e-40  138.3   0.0    1.4  1  Tubulin_C        Tubulin C-terminal domain
    4.9e-05   23.6   0.0    0.00011   22.5   0.0    1.6  1  Misat_Tub_SegII  Misato Segment II tubulin-like domain
     0.0013   18.4   0.0     0.0026   17.5   0.0    1.5  1  Tubulin_3        Tubulin domain
  ------ inclusion threshold ------
       0.11   11.6   0.0       0.19   10.9   0.0    1.4  1  Tubulin_2        Tubulin like


Domain annotation for each model (and alignments):
>> Tubulin  Tubulin/FtsZ family, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  224.0   0.0   5.4e-70   1.9e-66       1     195 [.       3     210 ..       3     212 .. 0.99
   2 ?   -2.2   0.0       1.1     4e+03      66     108 ..     291     332 ..     282     339 .. 0.71

  Alignments for each domain:
  == domain 1  score: 224.0 bits;  conditional E-value: 5.4e-70
                 EEEEEEEHHHHHHHHHHHHH...HHHCH..............HHHT.....TTEEEEE....EEESBHHHHHTS-GS........EEEE--CCCCTTC- CS
     Tubulin   1 eiivigvGqcGnqignelwellakehgiqsdg..........dslesfFsesgkveyiprsvaidtdpqvlneikags..elfnpnklllgkegagnng 87 
                 ei++i+ GqcGnq+g ++w+++a+ehg++ +g          ++l+++F+e   ++y+pr+v++d++p +++++k g+  +lf+p+++++g++gagn +
  EPX71224.1   3 EIVHIQAGQCGNQVGASFWSQIADEHGLDAEGiyrgdsedqlERLNVYFNEAAGGKYVPRAVLVDLEPGTMDAVKGGKfgNLFRPDNIIYGQSGAGNIW 101
                 79**************************98889****************************************************************** PP

                 -TT-HHHHHHHHHHTHHHHHHHHTT-SE.SEEEEEEETTSSHHHHHHHHHHHHHHHTSTTSEEEEEEEE--.GG.G-HHHHHHHHHHHHHHHHT-SEEE CS
     Tubulin  88 aggypevgkeaaeeileeirkevekcdslqgffitaslgGGTGSGlgpvilevlkeeypkalvvtvvvlPs.efsevvvepynailalkelieesdavi 185
                 a+g+++ g+e+a+++l+ +r+e+e cd lqgf++t+slgGGTGSG+g+++l++++eeyp++++ t++v P  + s+ vvepyna l++++l+e+sd ++
  EPX71224.1 102 AKGHYTEGAELADAVLDVVRREAEACDALQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRMMATFSVAPApKSSDTVVEPYNATLSMHQLVENSDETF 200
                 ************************************************************************999************************ PP

                 EEEHHHHHCC CS
     Tubulin 186 vidNdaLlki 195
                 +idN+aL  i
  EPX71224.1 201 CIDNEALSSI 210
                 *******887 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1.1
                 GS......EEEE--CCCCTTC--TT-HHH.HHHHHHHTHHHHHH CS
     Tubulin  66 agselfnpnklllgkegagnngaggypev.gkeaaeeileeirk 108
                 +  ++f  n++++  +  ++ + +      gk  ++e++e+ir 
  EPX71224.1 291 Q--QMFAANNMMVAADPRHGRYLTVAALFrGKVSMKEVDEQIRS 332
                 3..58888999988888888887555544388888888888875 PP

>> Tubulin_C  Tubulin C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.3   0.0   4.1e-44   1.5e-40       1     124 [.     261     381 ..     261     383 .. 0.99

  Alignments for each domain:
  == domain 1  score: 138.3 bits;  conditional E-value: 4.1e-44
                 TTC-EEEEEEESSSCTTTTTCS-HHHHHHHHHTCSGGGBSSSTSTTTSSEEEEEEEEEESSSHHHHHHHHHHHHHTTTS-BSTTSTTTEEEEEEECECT CS
   Tubulin_C   1 PrlhFlltsyaPlvsaekaavektsvqdvtrallepknimvkvdprkgkylaiallirGdvepkevnkavqrikekkkaqfveWiptgikvalnkkspy 99 
                 PrlhF+++++aPl +  +++++  sv ++t++++ ++n+mv++dpr+g+yl++a+l+rG+v++kev+++++++++k++a+fveWip+++  a+++++p+
  EPX71224.1 261 PRLHFFMVGFAPLAAIGSSSFQAVSVPELTQQMFAANNMMVAADPRHGRYLTVAALFRGKVSMKEVDEQIRSVQTKNSAYFVEWIPDNVLKAVCSVPPK 359
                 9************************************************************************************************** PP

                 -TTTSSCEEEEEEEEGGGHHHHHHH CS
   Tubulin_C 100 vkkqskvsvlmlaNttsiaelfkrl 124
                   k+s   +++++N+tsi+e+f+rl
  EPX71224.1 360 DLKMS---ATFIGNSTSIQEVFRRL 381
                 **999...***************97 PP

>> Misat_Tub_SegII  Misato Segment II tubulin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0     3e-08   0.00011       1      69 [.       2      72 ..       2      96 .. 0.77

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 3e-08
  Misat_Tub_SegII  1 rEivtlqlGnyaNyvgtHfWNt..Qesyf....tydeeeeesevdhdvlfregetkqgqvtytPRllivDlkgsl 69
                     rEiv +q G+  N vg+ fW +   e+ +     y  ++e +++++   +++   +    +y+PR+++vDl+ ++
       EPX71224.1  2 REIVHIQAGQCGNQVGASFWSQiaDEHGLdaegIYRGDSE-DQLERLNVYFN---EAAGGKYVPRAVLVDLEPGT 72
                     8*******************97224555555444555555.78877777776...345679*********98665 PP

>> Tubulin_3  Tubulin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   7.1e-07    0.0026      64     149 ..     120     199 ..     108     246 .. 0.65

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 7.1e-07
   Tubulin_3  64 lrpfaeecdqlrglqvftgvddaWG.GfaakylerlrdeygkksilvWvlaleeklkkkkkaklerklkklnkarslkelseqasly 149
                 +r  ae cd l+g+q+  +     G G ++  l ++r+ey+ + + ++ +a   k++++        ++  n + s+++l e++   
  EPX71224.1 120 VRREAEACDALQGFQLTHSLGGGTGsGMGTLLLSKIREEYPDRMMATFSVAPAPKSSDT-------VVEPYNATLSMHQLVENSDET 199
                 68889**************99887769****************9988876543333222.......233444555555554444433 PP

>> Tubulin_2  Tubulin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   5.4e-05      0.19     160     201 ..     135     174 ..      95     200 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 5.4e-05
   Tubulin_2 160 VvgSLaGGTGSGiflDvayllrkilkeekqkvkiiglvllPd 201
                 +  SL GGTGSG+   ++  +r+++++      ++ ++++P+
  EPX71224.1 135 LTHSLGGGTGSGMGTLLLSKIREEYPDRMM--ATFSVAPAPK 174
                 567************999999999999876..4566666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (448 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       500  (0.0278878); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 3175.53
//
Query:       EPX71225.1  [L=486]
Description: GTPase Grn1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.4e-24   85.2  12.6    2.4e-24   85.2  12.6    2.9  2  GN3L_Grn1    GNL3L/Grn1 putative GTPase
    2.4e-16   59.8   0.2    7.4e-12   45.4   0.0    2.6  2  MMR_HSR1     50S ribosome-binding GTPase
    5.4e-06   26.4   0.2    9.9e-05   22.3   0.2    2.2  1  RsgA_GTPase  RsgA GTPase
    2.9e-05   23.7   1.6     0.0031   17.1   0.0    3.2  4  GTP_EFTU     Elongation factor Tu GTP binding domain
    0.00014   21.4   0.0    0.00043   19.8   0.0    1.8  2  FeoB_N       Ferrous iron transport protein B
     0.0041   17.2   9.2      0.033   14.2   0.2    3.8  3  Dynamin_N    Dynamin family
  ------ inclusion threshold ------
      0.024   14.9   0.0        1.3    9.3   0.0    2.5  2  Roc          Ras of Complex, Roc, domain of DAPkinase
      0.037   13.4   0.0       0.12   11.6   0.0    1.9  2  AIG1         AIG1 family
      0.066   12.3   0.2       0.12   11.4   0.2    1.3  1  MCM          MCM P-loop domain
      0.075   13.1   0.2       0.15   12.2   0.2    1.4  1  Torsin       Torsin
      0.091   12.5   0.1       0.29   11.0   0.1    1.8  1  NOG1         Nucleolar GTP-binding protein 1 (NOG1)
       0.24   11.8   0.0       0.24   11.8   0.0    2.8  1  AAA_16       AAA ATPase domain
        0.3   11.6   0.0        0.3   11.6   0.0    3.1  3  AAA_18       AAA domain
        7.2    5.8  25.5         12    5.2  25.5    1.3  1  BUD22        BUD22


Domain annotation for each model (and alignments):
>> GN3L_Grn1  GNL3L/Grn1 putative GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.2  12.6   1.9e-27   2.4e-24       1      72 [.      14      85 ..      14      90 .. 0.95
   2 ?    0.7   1.3      0.43   5.5e+02      49      68 ..     117     136 ..     111     144 .. 0.65

  Alignments for each domain:
  == domain 1  score: 85.2 bits;  conditional E-value: 1.9e-27
                .HHHHHHHHHHHHHHHHHHHTT-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   GN3L_Grn1  1 rkrykiekkvkehnrKerKeakknptwkskkkkdpgIPnsfPfKeeiLeeieekkrkkeeekekkkeakkee 72
                r+r +iekk++ ++rKerK +kknp+wks+ +kdpgIPnsfP+K++iL++ie++kr++eeek +++ea++ +
  EPX71225.1 14 RLRARIEKKAASSRRKERKLEKKNPQWKSRIPKDPGIPNSFPYKDRILADIEAQKRQREEEKIANREAARSQ 85
                689****************************************************************97655 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.43
                 XXXXXXXXXXXXXXXXXXXX CS
   GN3L_Grn1  49 eeieekkrkkeeekekkkea 68 
                 +e++++k+++e+e e++  a
  EPX71225.1 117 AEAAQAKDAEEQEAEEEDDA 136
                 56667777777776666554 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.2   0.00014      0.18      58     114 .]     163     222 ..     111     222 .. 0.74
   2 !   45.4   0.0   5.8e-15   7.4e-12       2      63 ..     289     355 ..     288     400 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00014
                 SHHHHHHHHHHHHHHHHC.TSEEEEEEETT.....TTCSHHHHHHHHHHHHHTTSEEEEEEES CS
    MMR_HSR1  58 egaseekglgkaflalee.adlillvvdas.....eeklkpldeeleelleeakkplilvlnk 114
                 ++++++k + k+f++  e +d++l+v+da+     +   k++++++ +    ++k+l++v+nk
  EPX71225.1 163 KSDNSRKAFDKEFKKAVElSDIVLYVLDARdpegtR--SKEVEQQVVASA-AEEKRLVYVVNK 222
                 455666689999**999988********99765431..333444444443.267899999998 PP

  == domain 2  score: 45.4 bits;  conditional E-value: 5.8e-15
                 EEEEESTTSSHHHHHHHHHT......S.TEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCS.SHHHHH CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltg......e.kaivsdkpgtTrdinegrvklkgkeielvDtpGli.egasee 63 
                 v ++G+pNvGKS++inal++      +  + +++ +g Tr  +e +++   ++++l+D pG++  +as+e
  EPX71225.1 289 VSVIGYPNVGKSSVINALVNrsassrStPCPAGSAAGMTRALREVKLD---SKLRLIDSPGIVfPTASKE 355
                 89*****************94443321235777777*********997...79********754222222 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.2   7.7e-08   9.9e-05      25     161 ..     191     347 ..     174     352 .. 0.68

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 7.7e-08
                  STTTT.--HHHHHHHHHHHHHTT-EEEEEEE-GGG--HHH......................HHHHHHHHHHHTT.SEEEE--TTTHTTHHHHHHHCT CS
  RsgA_GTPase  25 lkepe.lslnlldrfLvlaeekgiepvivlnKiDlleeee......................eleelkeelealg.yevllvsaktkegleelkellk 98 
                  + +pe ++++ +++ +v+  +++ ++v v+nKiDl+  e                       +    ++++++ g ++ ll s k+ ++ ++lk+ l 
   EPX71225.1 191 ARDPEgTRSKEVEQQVVASAAEEKRLVYVVNKIDLVPPEVldrwlvylrahfptlplrsssgSSGFKHKTYSSNGtISALLKSLKSYSSKKKLKTSL- 287
                  4444326678899999999999999999999999999998889999998888766665555433333344444441233333344444444444444. PP

                  TSEEEEECSTTSSHHHHHHHHCTT.-----S--------------SEEEEEETTTEEEESS-SS CS
  RsgA_GTPase  99 dktsvlvGqSGvGKStLinallpe.lelktgevseklgrGkhTTtavellelaegglliDtPGf 161
                    t+ ++G   vGKS++inal+++ ++ +     +  g+    T+a + ++l+++  liD+PG+
   EPX71225.1 288 --TVSVIGYPNVGKSSVINALVNRsASSRSTPCPA--GSAAGMTRALREVKLDSKLRLIDSPGI 347
                  ..56789***************9603444444555..4555569999****************8 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   1.2       4.6   5.9e+03      28      52 ..      81     105 ..      58     127 .. 0.59
   2 ?   -3.7   0.0       5.5   7.1e+03      29      46 ..     122     141 ..     109     144 .. 0.48
   3 !   17.1   0.0   2.4e-06    0.0031      82     137 ..     170     228 ..     168     262 .. 0.80
   4 ?    4.2   0.0     0.021        27       3      32 ..     286     315 ..     284     349 .. 0.67

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 4.6
                 TSSCHHHHHHHHHSTHCHSHHHHHH CS
    GTP_EFTU  28 gaiskkgekaeeervlDtlkeErer 52 
                  a s+ ++++ee++ +   ++E+er
  EPX71225.1  81 AARSQGNMEEEEDSEMEEEADEEER 105
                 2333333333334445555555555 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 5.5
                 SSCHHHHHH..HHHSTHCHS CS
    GTP_EFTU  29 aiskkgeka..eeervlDtl 46 
                 a + ++++a  e+++v+D  
  EPX71225.1 122 AKDAEEQEAeeEDDAVMDED 141
                 22222222222446666665 PP

  == domain 3  score: 17.1 bits;  conditional E-value: 2.4e-06
                 GGHHHHHHHHHT-SEEEEEEETTTBSTHHHHHHHHHH...HHTTTEEEEEEESCGSTHH CS
    GTP_EFTU  82 dFskevirglrvlDgavlvvdaveGvepqteevlrla...lkegvpiivfiNKmDrlka 137
                  F ke  ++++  D+++ v+da++   ++++ev +++    +e+ +++ ++NK+D +  
  EPX71225.1 170 AFDKEFKKAVELSDIVLYVLDARDPEGTRSKEVEQQVvasAAEEKRLVYVVNKIDLVPP 228
                 699********************77666666555554000445555*********9944 PP

  == domain 4  score: 4.2 bits;  conditional E-value: 0.021
                 EEEEEEEESTTSSHHHHHHHHHHHTTSSCH CS
    GTP_EFTU   3 irnigiighvDhGKtTLtdrLlyktgaisk 32 
                  +++++ig  + GK++++ +L+ ++   ++
  EPX71225.1 286 SLTVSVIGYPNVGKSSVINALVNRSASSRS 315
                 57899****************977766544 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       2.5   3.3e+03      80     116 ..     183     224 ..     179     228 .. 0.49
   2 !   19.8   0.0   3.4e-07   0.00043       2      69 ..     288     359 ..     287     373 .. 0.70

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 2.5
                 SEEEEEEEGGGHH..HHHHHHHHHHHT...TSSEEEEEETHH CS
      FeoB_N  80 dvvvnvvdatnle..rnLyLtlqllel...gvpvvlalnmid 116
                 d+v+ v+da   e  r+  +  q++     ++++v ++n+id
  EPX71225.1 183 DIVLYVLDARDPEgtRSKEVEQQVVASaaeEKRLVYVVNKID 224
                 566666666654422344444444332111355566666666 PP

  == domain 2  score: 19.8 bits;  conditional E-value: 3.4e-07
                 EEEEEESTTSSHHHHHHHHHTTSEE.......EEESTTSSSEEEEEEEEETTEEEEEEE----SSSSSSSHHHHH CS
      FeoB_N   2 tvalvGnpnvGkttlfnaltgakqk.......vgNwpGvtvekkegklklkgkeveivDlPGiYslsayseeekv 69 
                 tv ++G pnvGk++++nal + + +        g  +G+t   +e+kl+   ++++++D PGi   +a  e+e+ 
  EPX71225.1 288 TVSVIGYPNVGKSSVINALVNRSASsrstpcpAGSAAGMTRALREVKLD---SKLRLIDSPGIVFPTASKEDERY 359
                 789****************987654122222245555666665555555...99********9777766666654 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   3.3      0.18   2.3e+02      59     167 ..     103     222 ..       8     223 .. 0.65
   2 !   14.2   0.2   2.6e-05     0.033       1      27 [.     289     315 ..     289     323 .. 0.84
   3 ?    2.4   0.0      0.11   1.5e+02      98     113 ..     334     349 ..     315     385 .. 0.82

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.18
                 T-EB--CHHHHHHHHHHHHHHHTSSSS--SS-EEEEEEETTS-SEEEEE---B-SSSGTTS.........HHHHHHHSTTEEEEEEEETTS.-CCC-.C CS
   Dynamin_N  59 ekkledfsevreeieketekiagankgiskkvillkilsllvkgltlvDlPGldsvnkrdq.........elvkeyikkadiilavtsanh.dlsns.e 146
                 e++ + ++ +  +i ++ + ++ + ++  ++   + + +  ++   lvD   ld ++   +         +  k++++ +di+l+v++a   + ++s e
  EPX71225.1 103 EERPDGVDPMIAKIAEAAQAKDAEEQEAEEEDDAVMDEDDENDAPALVDDGSLDASERIVKsdnsrkafdKEFKKAVELSDIVLYVLDARDpEGTRSkE 201
                 444444444444444444444444444444444444444444444555554444433222234456667788889999999999999999833333335 PP

                 HHHHHHHHSTTBTTEEEEEE- CS
   Dynamin_N 147 alflarevdpkgkrtivvltk 167
                 +++   +   ++kr + v++k
  EPX71225.1 202 VEQQVVASAAEEKRLVYVVNK 222
                 555555556667777777776 PP

  == domain 2  score: 14.2 bits;  conditional E-value: 2.6e-05
                 EEEEEBTTTTHHHHHHHHHTS--S--- CS
   Dynamin_N   1 iavvGsqSsGKSSvlnaLlgedilprg 27 
                 + v+G  + GKSSv+naL+ +    r+
  EPX71225.1 289 VSVIGYPNVGKSSVINALVNRSASSRS 315
                 689****************99865544 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.11
                 TTS-SEEEEE---B-S CS
   Dynamin_N  98 llvkgltlvDlPGlds 113
                  l+++l l+D+PG+  
  EPX71225.1 334 KLDSKLRLIDSPGIVF 349
                 567899*******975 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.086   1.1e+02      81     120 .]     183     225 ..     172     225 .. 0.68
   2 ?    9.3   0.0     0.001       1.3       2      30 ..     289     317 ..     288     343 .. 0.79

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.086
                 CEEEEEEEGHHH..HCHHHHHHH.HHHHCSSS-EEEEEE-TTT CS
         Roc  81 alailvydsrss..enlkeWlke.lkkvagkspvilvgnkiDl 120
                 +++++v+d+r+   ++ ke  ++ + + a+++ ++ v+nkiDl
  EPX71225.1 183 DIVLYVLDARDPegTRSKEVEQQvVASAAEEKRLVYVVNKIDL 225
                 67788888765312344444444055567788999******95 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.001
                 EEEESSTTSSHHHHHHCHCT-CCC-EEET CS
         Roc   2 vvlvGdsgvGKtsllkrfvedkfsekeks 30 
                 v ++G  +vGK+s ++ +v+++ s+++++
  EPX71225.1 289 VSVIGYPNVGKSSVINALVNRSASSRSTP 317
                 6789***************9998877655 PP

>> AIG1  AIG1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       1.8   2.4e+03      64      95 ..     166     193 ..     156     211 .. 0.59
   2 ?   11.6   0.0   9.6e-05      0.12       2      68 ..     288     357 ..     287     369 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1.8
                 CCHHCHHHHHHHHHHHCTT-ESEEEEEEETTB CS
        AIG1  64 vsadkiskeivrclllseegihalllvlslgr 95 
                 +s ++  ke ++      e  +++l+vl++++
  EPX71225.1 166 NSRKAFDKEFKKA----VELSDIVLYVLDARD 193
                 4444444444443....444577888888763 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 9.6e-05
                 EEEEESSTTSSHHHHHHHHHTS--.SS--TTTS---SS-EEEEE.EETTEEEEEEE--SC.CCTTCCHHC CS
        AIG1   2 tivlvGktgnGkSaTgNsilgkka.Fesklsaqsvtkkcqkksr.twdgkkinViDTPgl.fdlsvsadk 68 
                 t+ ++G   +GkS+ +N++++++a  +s  + ++    ++++ r ++ + k+  iD Pg+ f + +++d+
  EPX71225.1 288 TVSVIGYPNVGKSSVINALVNRSAsSRSTPCPAGSAAGMTRALReVKLDSKLRLIDSPGIvFPTASKEDE 357
                 677999***************99943454445555555555555478899*********95555555544 PP

>> MCM  MCM P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.2   9.4e-05      0.12      40     103 ..     270     332 ..     258     348 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 9.4e-05
                 HH---EBBBSSSSBBCSS-EEEEEESSTSTHHHHHHHHHHHSSSEEEEESSSSSSSHSSSEEEE CS
         MCM  40 lfggvkkkledktklrgdinvllvgdpgtaKsqlLkyveklapravytsgkgssaagLtaavvr 103
                 l+++ k + ++k+kl+++  v ++g p ++Ks +++++ + +  +  t   + saag+t a + 
  EPX71225.1 270 LLKSLK-SYSSKKKLKTSLTVSVIGYPNVGKSSVINALVNRSASSRSTPCPAGSAAGMTRALRE 332
                 455544.5667799*********************************************98765 PP

>> Torsin  Torsin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.2   0.00011      0.15      36      75 ..     269     308 ..     256     315 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00011
                 HHHHHHHHHHT-SS-SS-EEEEEEE-TTSSHHHHHHHHHH CS
      Torsin  36 lvvksvkaylenekpkkpLvlsfhGwtGtGknfvaeiiae 75 
                  ++ks+k+y +++k k +L++s+ G++  Gk+ v + +++
  EPX71225.1 269 ALLKSLKSYSSKKKLKTSLTVSVIGYPNVGKSSVINALVN 308
                 689******************************9999887 PP

>> NOG1  Nucleolar GTP-binding protein 1 (NOG1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   0.00022      0.29      13      58 .]     181     224 ..     179     224 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00022
        NOG1  13 ladavlFllDpseecg...ysleeQlsLleeikelfankpvivvlnKiD 58 
                 l d+vl++lD+    g    ++e+Q+     + +  ++k+++ v+nKiD
  EPX71225.1 181 LSDIVLYVLDARDPEGtrsKEVEQQV-----VASAAEEKRLVYVVNKID 224
                 899******98877773335677776.....667777799********9 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00018      0.24      24     127 ..     282     397 ..     265     407 .. 0.49

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00018
      AAA_16  24 p....elvllsGesGvGKsslvrellralekdggiflrgkcdql..esaipysalaqalareellrqllde..........aesaeleawrekleeala 106
                        v ++G++ vGKss++++l ++   +       + + +  +sa   +  ++al re  l   l +          ++s+e e++r  l+ a+ 
  EPX71225.1 282 KlktsLTVSVIGYPNVGKSSVINALVNRSASS-------RSTPCpaGSA---AGMTRAL-REVKLDSKL-RlidspgivfpTASKEDERYRLVLLNAIP 368
                 23344899**************9998744444.......3333311111...1133333.211111111.12333355555555555555555555555 PP

      AAA_16 107 ...avpelagaea........srllellkrll 127
                    +   +++  a        +r+  ll r+l
  EPX71225.1 369 sskI---DDPVPAaayilnylNRIPGLLERML 397
                 4431...2222222235556666666666665 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.2       4.4   5.6e+03     103     120 ..      73      90 ..      64     105 .. 0.55
   2 ?   -0.7   0.3       1.5   1.9e+03      88      88 ..     172     172 ..     114     248 .. 0.53
   3 ?   11.6   0.0   0.00023       0.3       3      63 ..     291     366 ..     289     380 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 4.4
      AAA_18 103 peelleRlekRgyeeaki 120
                 +e+ + R ++R++ + + 
  EPX71225.1  73 EEKIANREAARSQGNMEE 90 
                 344444444444444443 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 1.5
      AAA_18  88 s 88 
                 +
  EPX71225.1 172 D 172
                 2 PP

  == domain 3  score: 11.6 bits;  conditional E-value: 0.00023
      AAA_18   3 ltGtpGvGKttlakeLskrlgf..............gvnlrdvakenglllevdpe.aldeskrldedkldkllda 63 
                 + G+p vGK+++ ++L +r ++               + lr+v  ++ l+l + p   ++   ++de ++ +ll+a
  EPX71225.1 291 VIGYPNVGKSSVINALVNRSASsrstpcpagsaagmTRALREVKLDSKLRLIDSPGiVFPTASKEDERYRLVLLNA 366
                 89**************777533466666888888888888888888888888888887777888888777777776 PP

>> BUD22  BUD22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2  25.5     0.009        12     133     253 ..      15     166 ..       3     214 .. 0.49

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.009
       BUD22 133 kllgiekkkkkkeeekkkkkkkkkkkkkkeeee...................eeesdkeeesedsed..eekeeseddeeeeeededdedaee...... 204
                  ++ iekk +++ ++++k +kk+ + k++  ++                   + +++ eee+ ++ +  +++ + e++e++e+e+e d    e      
  EPX71225.1  15 LRARIEKKAASSRRKERKLEKKNPQWKSRIPKDpgipnsfpykdriladieaQ-KRQREEEKIANREaaRSQGNMEEEEDSEMEEEAD----Eeerpdg 108
                 44555554444445555555555555555555599999999999998887641.2222222222222331222222222222222222....1123345 PP

       BUD22 205 ..........deedeeaeerelaqydgllasddeded.....eyneetdeesseesdssdsses 253
                            +++++aee+e+++ d+++ ++d+++d     +      ++s ++s++  +s++
  EPX71225.1 109 vdpmiakiaeAAQAKDAEEQEAEEEDDAVMDEDDENDapalvD------DGSLDASERIVKSDN 166
                 5566666665445555555555555553333333333223220......222222222222211 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (486 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1703  (0.0949858); expected 358.6 (0.02)
Passed bias filter:                      670  (0.0373696); expected 358.6 (0.02)
Passed Vit filter:                       101  (0.00563333); expected 17.9 (0.001)
Passed Fwd filter:                        29  (0.00161749); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.76u 0.32s 00:00:01.08 Elapsed: 00:00:00.47
# Mc/sec: 3082.70
//
Query:       EPX71226.1  [L=302]
Description: SWI/SNF complex subunit Snf59 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.7e-38  131.5   0.0    4.3e-38  130.8   0.0    1.3  1  CRC_subunit  Chromatin remodelling complex Rsc7/Swp82 subunit


Domain annotation for each model (and alignments):
>> CRC_subunit  Chromatin remodelling complex Rsc7/Swp82 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.8   0.0   2.4e-42   4.3e-38      11     120 ..      90     203 ..      80     228 .. 0.87

  Alignments for each domain:
  == domain 1  score: 130.8 bits;  conditional E-value: 2.4e-42
  CRC_subunit  11 dpegek.....kidknGkLlggreyrvktFtleeregkklyvLstdlarllgfrdsylffkknpqllkllatqeekedLiergllpsslksrqiklvt 103
                  d++ e      +idk+G+L++g ey+++tF+l++r g++ly+L+t++ar+lgf+dsy++f+k+p+l+k+ ++q e+++L+ +g+l++++++rq+++v+
   EPX71226.1  90 DKKFESvtsnaVIDKYGRLADGLEYKARTFCLNGR-GDVLYMLGTECARILGFKDSYFMFHKTPNLRKISTSQAERDQLVYMGILAQKYRFRQLSIVP 186
                  554444445559***********************.************************************************************** PP

  CRC_subunit 104 arsvFlefGariivkGk 120
                  ar+vFl+fG +i+ kG+
   EPX71226.1 187 ARQVFLAFGPKILLKGT 203
                  ****************4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       501  (0.0279436); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 2083.60
//
Query:       EPX71227.1  [L=970]
Description: 3'-5' exoribonuclease subunit Dis3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.2e-99  331.4   0.1    8.9e-99  330.9   0.1    1.2  1  RNB            RNB domain
    1.5e-26   92.1   2.1    2.9e-26   91.2   2.1    1.5  1  Rrp44_S1       S1 domain
    2.4e-23   82.5   0.1    8.2e-23   80.8   0.1    1.9  1  Rrp44_CSD1     Rrp44-like cold shock domain
    2.2e-20   72.5   0.0    8.3e-20   70.6   0.0    2.1  1  OB_Dis3        Dis3-like cold-shock domain 2 (CSD2)
    9.1e-10   38.9   0.0    3.3e-09   37.1   0.0    2.0  2  PIN_4          PIN domain
    3.3e-07   30.4   0.0      0.002   18.3   0.0    3.7  3  CSD2           Cold shock domain
    0.00015   22.0   1.1    0.00042   20.6   0.1    2.2  2  Dis3l2_C_term  DIS3-like exonuclease 2 C terminal


Domain annotation for each model (and alignments):
>> RNB  RNB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  330.9   0.1  3.5e-102   8.9e-99       1     324 [.     496     827 ..     496     829 .. 0.94

  Alignments for each domain:
  == domain 1  score: 330.9 bits;  conditional E-value: 3.5e-102
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RNB   1 RkdlrdllvitIdpedakdlDdAisieklpngnyelgVhIADvshyvkegspldkearkratsvyLpekvvpMLPqelsedlcSLnpgedrlalsvlid 99 
                 Rkd+rdll+++Idp++++d+DdA++ + lpngn+e+gVhIADv+h+vk+ +++d+ea+ r+t+vyL +k + MLP  l +dlcSL+p+ +r a+s+l++
  EPX71227.1 496 RKDFRDLLICSIDPPGCQDIDDALHARVLPNGNFEVGVHIADVTHFVKPRTAMDSEAASRGTTVYLVDKRIDMLPMLLGTDLCSLRPYVERFAFSCLWE 594
                 9************************************************************************************************** PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RNB 100 vdekgevlsveiylsvIkskarltydevqdlleqkdekeekktaedLellyelakalrkkRlkkgalefdspeikllldedkgnrielkveeetkahsl 198
                 +de+ ++ +v++++svI sk+ ++y ++q+ +++k+   ++  ++ ++ l +l+k+l++kR ++gal++ spe++++ d+++  ++++++++  + +sl
  EPX71227.1 595 MDEDANIVNVSFTKSVIASKEAFSYADAQARIDDKKM--QDPLTNGMRILLKLSKKLKQKRMDDGALNLASPEVRIQTDNETSDPMDVEIKQLLETNSL 691
                 ********************************76665..668********************************************************* PP

                 xxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxx... RF
         RNB 199 veelmllANelvArfl.seleipailriheepsnekledliklakklglklednsskknlqeslekleeee...aeqllselllrllkeakyssep... 290
                 vee+mllAN  vA+++   ++++a+lr+h  p  +++++l+++++  +  + + ++ k+l +sl+++ + +    ++ll+ l +r++ +a+y+++    
  EPX71227.1 692 VEEFMLLANISVAQKIyDTFPQTAVLRRHASPPLTNFDSLQDILQVCKGMHLKCDTSKSLAKSLDECVDPNepyFNTLLRILTTRCMLSAEYFCSGtia 790
                 ****************9999*************777777777777333334445555699*******9999998999****************999999 PP

                 ...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RNB 291 ...vgHfgLaleeYthfTSPirRYpDlvvhrllkall 324
                    ++H+gLa+++YthfTSPirRY+D++ hr+l a++
  EPX71227.1 791 apeFRHYGLATSIYTHFTSPIRRYADVLAHRQLAAAI 827
                 99*******************************9987 PP

>> Rrp44_S1  S1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.2   2.1   1.2e-29   2.9e-26       2      88 ..     878     965 ..     877     966 .. 0.92

  Alignments for each domain:
  == domain 1  score: 91.2 bits;  conditional E-value: 1.2e-29
                 EEEEEEEEEESSEEEEEETTTTEEEEEEHHHCBS-GGG..-EEETTTTEEEEBBTTSSS-..EEEETTSEEEEEEEEEE-SSSSSEEEE CS
    Rrp44_S1   2 eeegyvikvfsNGvvvlvprfGiEglirledlaeeeeskeaefdeeeykleveekkkekk..vtvelFdkvkVkvksekdestgkrkvk 88 
                 ee++yvikvf+NG+vv++++fG+Eg++ ++++++  e+ ++ef e++y+l+ve ++  k   v+v++F+kv+V+v +++de++gk+kv+
  EPX71227.1 878 EEDAYVIKVFKNGFVVFIAKFGLEGIVYTKSMTNMLEP-NVEFLEDKYMLKVEIRDPPKPkmVEVQMFQKVRVRVGTVRDEHSGKQKVD 965
                 89******************************987776.9***********999877665679***********************986 PP

>> Rrp44_CSD1  Rrp44-like cold shock domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.8   0.1   3.2e-26   8.2e-23       4      99 ..     248     344 ..     245     369 .. 0.88

  Alignments for each domain:
  == domain 1  score: 80.8 bits;  conditional E-value: 3.2e-26
                 ------HHHHHHHHHTTSEEEEEEEEESSBTTEEEEE-SSSSS-EEEESHHHHTS--TT-EEEEEE--GGG-B---.SS-B-CCCSSTT--TT-B-- CS
  Rrp44_CSD1   4 fpeyystarvmgglkngvlyqgniqiseynflegsvslprfskpvlivgqknlnrafngdqvivellpqsewkaps.sivldsehfdvndnpdieag 99 
                 + +++st+r++  +kng +++g +++s ynflegs+  p f kp+li g+ nlnr+++gd v v++lpqs+wk+ +  i  d e + vn   + +a 
  EPX71227.1 248 YEQHWSTSRMLTCIKNGEVHKGVLNVSTYNFLEGSINTPGFNKPILISGRENLNRSVQGDVVCVQILPQSQWKTEAgEIASDDEDVLVNASAEPDAS 344
                 56789********************************************************************976268899999999987665555 PP

>> OB_Dis3  Dis3-like cold-shock domain 2 (CSD2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.6   0.0   3.3e-23   8.3e-20       2      77 .]     394     461 ..     393     461 .. 0.97

  Alignments for each domain:
  == domain 1  score: 70.6 bits;  conditional E-value: 3.3e-23
                 EEE--SSTTS--EEEETTSSTTTHHHHTTTTTT--EEEEE----TT-SS-EEEEEEE-HHHHHHHHHHHHHHHHTT CS
     OB_Dis3   2 vlfkPldkrlPriliptkelpeeflenpeelegklfvvkidsWsetsryPlGeivksLGeagdieaeteaiLleng 77 
                 vl++P+d+r+P+i+ +t+++         +l g+++v+ id+W++tsryP+G++v+ LGe+++ eaetea+Lle++
  EPX71227.1 394 VLLTPMDRRIPKIRFRTRQA--------PRLLGQRIVAAIDTWEATSRYPEGHFVRALGEMETKEAETEALLLEYD 461
                 89******************........7999******************************************96 PP

>> PIN_4  PIN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.1   0.0   1.3e-12   3.3e-09       2     129 ..      86     209 ..      85     211 .. 0.83
   2 ?   -2.5   0.0       2.3     6e+03      54      79 ..     652     677 ..     627     699 .. 0.65

  Alignments for each domain:
  == domain 1  score: 37.1 bits;  conditional E-value: 1.3e-12
       PIN_4   2 VlDTnvlLhdpealksfkeehdvviPitVleELdklKkgsserelarlarqanrlldellekesgrlkvqtsaeelpeeeseseknDnrIlavalelke 100
                 + DTnv+ h+++al++ ++  dv++ +tVl+E+ ++      ++++rl+++ ++ +    ++  ++  v++ + e p+   +  +nD++I a+a ++  
  EPX71227.1  86 IPDTNVFYHCMDALEHPSNFFDVIVLQTVLSEIASKSIPLY-NRIKRLCQEKTKRFTPFSNEFFSETYVDKIEGESPN---D--RNDRAIRAAASWYTG 178
                 78*******************************66555555.999999998887776555554555556665555554...5..9************** PP

       PIN_4 101 ekp..drkvvLvskDinlrikAkalgieaed 129
                 +      kv+L+++D+ +   A  +gi++ +
  EPX71227.1 179 HLAglGIKVLLITNDRRNAEIAAEQGIQTST 209
                 *999999********************9976 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 2.3
       PIN_4  54 nrlldellekesgrlkvqtsaeelpe 79 
                 +r+ d +l+ +s+++++qt++e  ++
  EPX71227.1 652 KRMDDGALNLASPEVRIQTDNETSDP 677
                 33334445555888888888776664 PP

>> CSD2  Cold shock domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.0    0.0033       8.4       8      46 ..     287     326 ..     283     329 .. 0.81
   2 ?    0.1   0.0      0.37   9.5e+02      36      50 ..     351     367 ..     346     375 .. 0.72
   3 !   18.3   0.0   7.6e-07     0.002      25      71 ..     417     464 ..     396     468 .. 0.78

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0033
        CSD2   8 rlkqdifip.keklkgakdGdkVvveiteypdkknpeGev 46 
                  +++ i+i+ +e+l+  ++Gd+V v+i+ + + k+  Ge+
  EPX71227.1 287 GFNKPILISgRENLNRSVQGDVVCVQILPQSQWKTEAGEI 326
                 578899999788999************9876556667777 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.37
        CSD2  36 ypdkkn..peGevievL 50 
                  p+ k+  p+G+++ +L
  EPX71227.1 351 TPTSKKahPTGKIVGIL 367
                 46444336******999 PP

  == domain 3  score: 18.3 bits;  conditional E-value: 7.6e-07
        CSD2  25 dGdkVvveiteyp.dkknpeGevievLGkkgdpgveilsilakhglpe 71 
                  G+ +v+ i  ++ + + peG+ ++ LG+ +++++e ++ l ++++++
  EPX71227.1 417 LGQRIVAAIDTWEaTSRYPEGHFVRALGEMETKEAETEALLLEYDVQH 464
                 49**********955577***************************987 PP

>> Dis3l2_C_term  DIS3-like exonuclease 2 C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1       1.3   3.4e+03      15      24 ..     104     113 ..     103     117 .. 0.83
   2 !   20.6   0.1   1.6e-07   0.00042       4      82 ..     878     958 ..     875     963 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 1.3
  Dis3l2_C_term  15 ssfDVliley 24 
                    ++fDV++l++
     EPX71227.1 104 NFFDVIVLQT 113
                    68*****997 PP

  == domain 2  score: 20.6 bits;  conditional E-value: 1.6e-07
  Dis3l2_C_term   4 eekavVvnVldssfDVlileyGlekRVyldklp..lk.efefdk.tkvLtLyWkkdvpeaevvqeeekfssvvkvvlkseees 82 
                    ee a V++V ++ f V+i ++Gle  Vy++++   l+ ++ef + +  L++    ++p ++ + e+++f++v+++v +   e+
     EPX71227.1 878 EEDAYVIKVFKNGFVVFIAKFGLEGIVYTKSMTnmLEpNVEFLEdKYMLKVEI--RDPPKPKMVEVQMFQKVRVRVGTVRDEH 958
                    799*****************************986557778865255577777..6677788899999999999887766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (970 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       483  (0.0269396); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.72u 0.29s 00:00:01.01 Elapsed: 00:00:00.46
# Mc/sec: 6364.04
//
Query:       EPX71228.1  [L=173]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.2e-08   33.1   0.0    7.7e-08   32.6   0.0    1.3  1  4HBT      Thioesterase superfamily


Domain annotation for each model (and alignments):
>> 4HBT  Thioesterase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.6   0.0   4.3e-12   7.7e-08       2      74 ..      75     146 ..      74     150 .. 0.91

  Alignments for each domain:
  == domain 1  score: 32.6 bits;  conditional E-value: 4.3e-12
                 SSB-HHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEEEEESS-BBTTCEEEEEEEEEEEESSEEEEEEEEEETT CS
        4HBT   2 GvvhgGvylallDeaagaalrslggrgilvvvvelsidflrpvrlgdeltvearvlrlgrtsavvevevrded 74 
                 +++hgG ++++lDea+++ +++   + +l v+v+l i++++p  +g+   + ++ +++ ++   +  e+++ +
  EPX71228.1  75 NILHGGFIASMLDEALAYGIFGNFAS-RLGVTVNLDITYVAPSICGHLYKIVCNTTKIEGRKGWIYGELYRLS 146
                 69***********************9.******************************9998887777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       291  (0.0162307); expected 358.6 (0.02)
Passed bias filter:                      267  (0.0148921); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.28s 00:00:00.71 Elapsed: 00:00:00.44
# Mc/sec: 1170.84
//
Query:       EPX71229.1  [L=392]
Description: cytochrome c heme lyase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-70  238.4  33.9    9.1e-70  235.5  21.1    4.3  3  Cyto_heme_lyase  Cytochrome c/c1 heme lyase


Domain annotation for each model (and alignments):
>> Cyto_heme_lyase  Cytochrome c/c1 heme lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.5     0.015   2.6e+02      21      47 ..       4      30 ..       1      46 [. 0.57
   2 !    5.1   0.5    0.0008        14      16      41 ..      66      91 ..      45     102 .. 0.71
   3 !  235.5  21.1   5.1e-74   9.1e-70      21     292 .]     117     387 ..      95     387 .. 0.80

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.015
  Cyto_heme_lyase 21 skasspseCPmhkkkkskkkkaaseaa 47
                     s++++ ++CP+++++  ++++++++ +
       EPX71229.1  4 SESANGKSCPIDHRAYMQQQQQQQQRP 30
                     445566778888655554444444333 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.0008
  Cyto_heme_lyase 16 sksasskasspseCPmhkkkkskkkk 41
                     ++++ + ++ p+eCPmh++++++++k
       EPX71229.1 66 RAQELKGQEIPPECPMHSQREEANEK 91
                     2335567899*******776666554 PP

  == domain 3  score: 235.5 bits;  conditional E-value: 5.1e-74
  Cyto_heme_lyase  21 skasspseCPmh...................kkkkskkkkaaseaaakekkkesasacpvkeee........eseeeeeksalsklnplnymps 87 
                      + ++ pseCPm+                   + k+  +++++++++a ++++  +s+cp+++++         +   ++++++ ++np n m++
       EPX71229.1 117 DMRNIPSECPMSkqengggeksswfsfwkptEVKSWDQRQEQTQVPAPAQTQGYPSECPMSQTTskakeswwGRMWGKQEEESMEINPDNLMYK 210
                      4456677777775555555555555555442122222333444455556666677788885544788888883344455566789********* PP

  Cyto_heme_lyase  88 elsqerapeqkvdLpteReissiPkgdeeglWeYPspqqmynAmlrKGyedipedavesmvavHnflnEgaWeeileWEkkfakglakgwkkck 181
                      elsq+ +++q vdL t+R++ssiPk+d++ lW+YPspqqmynAm rKGy d   ++v  mv++HnflnEgaW+ei  WE+   +          
       EPX71229.1 211 ELSQKAKEDQVVDLGTKRSTSSIPKADGD-LWKYPSPQQMYNAMWRKGYRDSG-ENVPMMVEIHNFLNEGAWKEIQAWEQMNGE---------- 292
                      ***************************98.*********************75.68***********************99888.......... PP

  Cyto_heme_lyase 182 rgeekveeelekeeePkLlrFqGrpkelsPkarllqllgklfPskfst.elPFDRHDWlvlRkteeeekkevrYviDyYsgpdeetGepvfllD 274
                       g +          + kLlrF+G++++ sP+a ++ +lg++fPs+++t e PFDRHDW+v+Rk++    + +rYviDyY++pde  G+pvf lD
       EPX71229.1 293 -G-T----------DAKLLRFEGNASKKSPRAMWYMMLGRVFPSRWGTyEGPFDRHDWYVQRKDN----QVIRYVIDYYEAPDEG-GQPVFSLD 369
                      .2.3..........348*****************************98578************54....56**********9987.9******* PP

  Cyto_heme_lyase 275 vRPaldsltaaadRlvrw 292
                      vRPald+++a++ R+ +w
       EPX71229.1 370 VRPALDNVEAMKMRFRHW 387
                      ***************999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (392 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       679  (0.0378716); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.23s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 2896.21
//
Query:       EPX71230.1  [L=473]
Description: transcription factor Ste11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.3e-13   49.9   0.4    6.4e-13   48.9   0.4    1.5  1  HMG_box          HMG (high mobility group) box
  ------ inclusion threshold ------
      0.017   14.5   0.0      0.035   13.4   0.0    1.4  1  MATalpha_HMGbox  Mating-type protein MAT alpha 1 HMG-box
       0.08   10.8   0.9        0.1   10.4   0.9    1.1  1  DUF2921          Protein of unknown function (DUF2921)


Domain annotation for each model (and alignments):
>> HMG_box  HMG (high mobility group) box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.9   0.4   1.1e-16   6.4e-13       1      69 []      14      78 ..      14      78 .. 0.95

  Alignments for each domain:
  == domain 1  score: 48.9 bits;  conditional E-value: 1.1e-16
                --SS--HHHHHHHHHHHHHHHHSTTS-HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     HMG_box  1 pkRplsafflfskeqraklkaenPelknaeiskklgekWkalseeeKkkYeekaekekaryekekpeyk 69
                +kRpl++f+l++++ +     e P+ + + is+++ge W+++s+++K+ Y e ++ e+++++ ++peyk
  EPX71230.1 14 VKRPLNSFMLYRRDRQ----LEIPTTNHQSISRIIGELWRNESAQVKRYYAELSALERQKHMLQNPEYK 78
                69*********98876....567*********************************************8 PP

>> MATalpha_HMGbox  Mating-type protein MAT alpha 1 HMG-box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   5.8e-06     0.035      37      81 ..       8      52 ..       3      59 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 5.8e-06
  MATalpha_HMGbox 37 eakakkakkklNgFmgfRsYylkLfsdlqqkeaSgfltqlWekdp 81
                     ++k++  k++lN Fm +R      ++ ++ + +S +++ lW+++ 
       EPX71230.1  8 NSKSSSVKRPLNSFMLYRRDRQLEIPTTNHQSISRIIGELWRNES 52
                     5678899***********999888999**************9985 PP

>> DUF2921  Protein of unknown function (DUF2921)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.9   1.7e-05       0.1     376     495 ..      39     165 ..      29     204 .. 0.63

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 1.7e-05
     DUF2921 376 qrsivvGqiwsikkendsgypllfekivfssselwrvnlsglkYeYtkveeakkllersekksl...........kkslklsYpkleeasdsdmslsll 463
                 + s ++G++w++++++ + y     +++    e+++  l++ +Y+Yt  ++a +  +r+ ++++            ++  ++Y ++   +++++ ls +
  EPX71230.1  39 SISRIIGELWRNESAQVKRY---YAELS--ALERQKHMLQNPEYKYTPKKRACRRSKRKASTTTtrsrpqtdfaiLQQI-STYSAST--EQTASVLSRV 129
                 56889*******99988888...44444..4555555789999*********999988744444466666666653333.5666665..4445566666 PP

     DUF2921 464 veetlvasgvadp...lsvgsllgeg..ssseeessk 495
                  ee   a g +d    + + +++++    + ++++ +
  EPX71230.1 130 NEE-RLAAGTSDTkipVDLAQQVYKLadYNMDPHAVD 165
                 666.244444443445888888887765222333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (473 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       644  (0.0359195); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.28s 00:00:00.81 Elapsed: 00:00:00.44
# Mc/sec: 3197.85
//
Query:       EPX71231.1  [L=292]
Description: hsp70-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.5e-20   73.8   3.0    1.4e-19   70.7   0.2    2.8  3  Fes1       Nucleotide exchange factor Fes1
  ------ inclusion threshold ------
       0.11   11.9   5.2       0.86    8.9   0.1    2.2  2  TAF1_subA  TAF RNA Polymerase I subunit A


Domain annotation for each model (and alignments):
>> Fes1  Nucleotide exchange factor Fes1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.7   0.2   1.6e-23   1.4e-19       2      93 .]       2      83 ..       1      83 [. 0.81
   2 ?    2.4   0.1     0.033   2.9e+02      32      88 ..     119     179 ..     103     184 .. 0.68
   3 ?   -1.0   0.0      0.39   3.5e+03      36      63 ..     218     245 ..     203     272 .. 0.68

  Alignments for each domain:
  == domain 1  score: 70.7 bits;  conditional E-value: 1.6e-23
        Fes1  2 neLLkWsienstaedasaseqeaesaaeaakaskekldpeildallggpsdaelmkeamevledeevtlenkliAldnleqlieslDnAnnL 93
                ++LL ++ e         ++q   sa++ +++s++kld+++ld+++g  + a++m++am+ +ede+v l++k iA+dnle+l+e++DnAnnL
  EPX71231.1  2 EKLLAFATEL--------QAQGGGSANP-PPPSNQKLDTSVLDHIFG-SNPADEMRHAMNGIEDESVPLDQKEIAFDNLEMLVEHIDNANNL 83
                5666666644........1222223333.344559************.*******************************************8 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.033
        Fes1  32 kaskekl.dpeildallg..gpsdaelmkeam.evledeevtlenkliAldnleqlieslD 88 
                 + s+++l +++ l+ l+   +++d+++ k ++  ++++e ++ e  +  ld++e+   +lD
  EPX71231.1 119 PRSQNDLiENDGLNKLFTslQKEDSDEAKSKIlYAITSELKHNEPGVFLLDKIENAWSQLD 179
                 2233555477889999777779999999887614566667777778888888888777777 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 0.39
        Fes1  36 ekldpeildallggpsdaelmkeamevl 63 
                    +++++++ l++ sd +   +a+++l
  EPX71231.1 218 YSFTNKVYQFALQHSSDEDCVAKALHTL 245
                 5567777777888788877777777666 PP

>> TAF1_subA  TAF RNA Polymerase I subunit A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.1   9.6e-05      0.86     266     296 ..      68     105 ..      26     129 .. 0.81
   2 ?    4.8   1.6    0.0018        16      15     119 ..     131     249 ..     128     283 .. 0.65

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 9.6e-05
   TAF1_subA 266 llLevialhLDaagwkenlkiWkeLasclk.......q 296
                   Le++++h+D a++ + l++W +L ++l+       +
  EPX71231.1  68 DNLEMLVEHIDNANNLKPLQMWPRLLKQLEnpepslrK 105
                 579*************************9635554441 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.0018
   TAF1_subA  15 lsvllqgledekspkeareiiwkvgleilkhnhpks..tqeiydvfmerlknlgvknykki..slehalflllqgnieeakrnl.............ee 96 
                 l+ l+  l++e+s + +++i++ + +e+ ++ +p      +i +++++   +l+ k++++    + ++  ll+q++  +  + l              +
  EPX71231.1 131 LNKLFTSLQKEDSDEAKSKILYAITSELKHN-EPGVflLDKIENAWSQLDAILDMKHSNMTkrVIFFFNSLLIQEDNSK--QVLfekakaysftnkvYQ 226
                 6789999*********************999.55431145666666654444444433332225555555555555543..355766666655544322 PP

   TAF1_subA  97 lvsqeklikeplvnlykGLlsYq 119
                  + q+ + ++ + ++++ L+ + 
  EPX71231.1 227 FALQHSSDEDCVAKALHTLSLFS 249
                 55555555557777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (292 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       724  (0.0403815); expected 358.6 (0.02)
Passed bias filter:                      431  (0.0240393); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2089.47
//
Query:       EPX71232.1  [L=366]
Description: splicing factor Cwf28 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.4e-18   66.8   0.1    5.3e-18   64.9   0.1    2.1  1  G-patch_2  G-patch domain


Domain annotation for each model (and alignments):
>> G-patch_2  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.9   0.1   2.9e-22   5.3e-18       1      60 [.     185     237 ..     185     238 .. 0.89

  Alignments for each domain:
  == domain 1  score: 64.9 bits;  conditional E-value: 2.9e-22
   G-patch_2   1 peeasleeyeevPVeeFGaAlLrGMGWkegqgigknkkgrvkpeepkrRpgrlGLGakpa 60 
                 p++++l +y+ +PVe+FGaA+LrGMGW+ g+  +k+      + e++rRp++lG+Gakp+
  EPX71232.1 185 PDSSNLRDYADIPVEDFGAAMLRGMGWN-GKLSSKE------AFEVNRRPTFLGMGAKPM 237
                 79999***********************.5544444......79**************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (366 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       997  (0.0556082); expected 358.6 (0.02)
Passed bias filter:                      276  (0.0153941); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2618.14
//
Query:       EPX71233.1  [L=545]
Description: signal recognition particle receptor alpha subunit Srp101 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-49  168.5   0.1    2.1e-49  167.8   0.1    1.3  1  SRP54           SRP54-type protein, GTPase domain
    1.8e-15   57.6  15.6    1.8e-07   31.4   7.4    2.2  2  SRP-alpha_N     Signal recognition particle, alpha subunit, N
    5.7e-10   39.3   0.4    2.1e-09   37.5   0.1    2.2  2  SRP54_N         SRP54-type protein, helical bundle domain
    1.9e-05   24.7   0.2    0.00049   20.2   0.2    2.7  1  CbiA            CobQ/CobB/MinD/ParA nucleotide binding domain
    0.00032   20.7   0.1       0.05   13.5   0.0    2.9  2  AAA_31          AAA domain
    0.00051   19.8   0.1     0.0014   18.4   0.0    1.8  2  AAA_24          AAA domain
    0.00052   19.1   0.0     0.0012   17.8   0.0    1.6  1  MeaB            Methylmalonyl Co-A mutase-associated GTPase M
     0.0012   19.1   0.0     0.0044   17.3   0.0    2.0  1  AAA_22          AAA domain
     0.0028   16.9   3.8        1.8    7.7   0.0    3.6  4  ArsA_ATPase     Anion-transporting ATPase
  ------ inclusion threshold ------
      0.017   15.5   0.4      0.057   13.8   0.0    2.2  3  AAA_16          AAA ATPase domain
      0.021   14.6   0.0      0.045   13.5   0.0    1.6  1  AAA_30          AAA domain
      0.025   14.7   1.0       0.21   11.7   1.0    2.5  1  MMR_HSR1        50S ribosome-binding GTPase
       0.03   13.8   0.4       0.13   11.7   0.0    2.1  2  Fer4_NifH       4Fe-4S iron sulfur cluster binding proteins, 
      0.073   13.5   0.3       0.18   12.2   0.0    1.8  1  AAA             ATPase family associated with various cellula
      0.099   12.7   1.6       0.67   10.0   0.0    2.9  3  AAA_14          AAA domain
       0.11   12.1   2.0        1.5    8.4   0.1    2.9  3  HMG_CoA_synt_C  Hydroxymethylglutaryl-coenzyme A synthase C t
       0.47   11.0   0.0       0.47   11.0   0.0    2.6  1  ABC_tran        ABC transporter


Domain annotation for each model (and alignments):
>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  167.8   0.1     2e-52   2.1e-49       3     195 ..     342     544 ..     340     545 .] 0.93

  Alignments for each domain:
  == domain 1  score: 167.8 bits;  conditional E-value: 2e-52
                 EEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEEESTSSTTHHHHHHHHHHH......TTEEEEESSTTSCHHHHHHHHHHHHHHTTSSEEEEEE--SS CS
       SRP54   3 villvGlqGaGKTttlaKLaallkkegkkvllvaaDtfRaaAveQLktlaek......lgvpvikkkeeadpaavakeavekakeekidvvlvDTaGrl 95 
                  i l+G++G+GK ttlaKLa +l +++ ++l++a+DtfR +A+eQL ++ ++        ++++++  ++d+  v+k+av+ ak++++dv+l+DTaGr 
  EPX71233.1 342 TISLIGVNGVGKSTTLAKLAYWLLSNNFRILVAACDTFRSGAIEQLGVHVKNlqslkgSSIELFAQGYGKDSSFVVKNAVDYAKKNSFDVILIDTAGRR 440
                 6889**********************************************993343334578888********************************** PP

                 TTHHHHHHHHHHHHHHHSSSEEEEEEETTBHTHHHHHHHHHHHHS...SCSEEEEESTTSSSS.TTHHHHHHHHHTS-EEEEE-SSSTTGEEE--HHHH CS
       SRP54  96 qndkelmeelkkikkvvkpdevllvldattgqeavkqakaFkeav...gitgviltklDgdak.gGaalsiaaelklPikfigvGekiedleefdperl 190
                 +nd++lm  l+k+ k++k d+++ v +a++g + ++qak+F+ ++    ++g+i++k+D+  k  G ++ +++++ +Pi+f+gvG+ + dl++ + +++
  EPX71233.1 441 HNDQRLMGSLEKFTKATKLDKIFQVAEALVGTDSLAQAKHFQASLyhrPLDGFIISKVDTVGKmVGVMVGMVYSVRVPIVFVGVGQMYSDLRTLSVDWV 539
                 ******************************************9885557**********987736********************************** PP

                 HHHHH CS
       SRP54 191 vsrll 195
                 v++l+
  EPX71233.1 540 VDQLI 544
                 **997 PP

>> SRP-alpha_N  Signal recognition particle, alpha subunit, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.8   6.9   5.3e-10   5.6e-07       9     119 ..      34     142 ..      30     155 .. 0.78
   2 !   31.4   7.4   1.7e-10   1.8e-07     182     289 ..     130     229 ..     120     231 .. 0.68

  Alignments for each domain:
  == domain 1  score: 29.8 bits;  conditional E-value: 5.3e-10
                  HHTTT-SS-.----TTS----S--EEEEETTTTEEEEEE-BTTB--CHHHHHHHHHHHHHHHHHGGGGGSS-S----TT....HHHHHHHHHHHHXXX CS
  SRP-alpha_N   9 dvllEERsgaaasnssfkkdsytLKwtfdnelgLvFVavYqkiLhLsYvDkLLdnvkteFvdlYkpklkpkttlvecaksy..FdeyFdqllrelEas 104
                  +++l ER   ++ +++f +d +t++++ + + g+vF +++q      +   LL++++ +F++lY+++lk+k    e +  +  F   +++ l++l + 
   EPX71233.1  34 EAFLSER---KNMETTFHQDRFTIQFQESIQNGIVFAVAFQDAKAEAFTQSLLNSMHNIFINLYQEQLKNKDFPSEDDI-IrnFVPLYNAKLSQLSKV 127
                  689****...567899*****************************************************5555555543.357999999999999998 PP

                  XXXXXX........X CS
  SRP-alpha_N 105 aeaakkskaakepka 119
                  +++++ ++++ ++++
   EPX71233.1 128 SDKENLTSNEVNRQE 142
                  887654443322222 PP

  == domain 2  score: 31.4 bits;  conditional E-value: 1.7e-10
                  .XXX.XXXXXXXXXXXXXX..XXXXXXXXXXX....XXXXXXX..XXXXXX.XXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXX.X CS
  SRP-alpha_N 182 eagptaedvsrrarkkankkrssagassgdeakasksskkkkkkpkkkgkk.aRvWdadgsadeedkLDySapadesgaeaeaveavdastwgsktdk 278
                  +++ t ++v+r++++ka  ++     +  ++ +   s  k++++++kkgkk  R+Wd++ +++ee++L+yS + +++  ++++ ++v  +t  +kt+k
   EPX71233.1 130 KENLTSNEVNRQEKNKALPRQ-----QPRQKMH--TS--KQAPSTSKKGKKeLRRWDDQLTNEEEEALNYSGNVSNEVPSSSQLSNVVGDTNFQKTKK 218
                  244555666666665554222.....1222222..22..2233335677776*******8889999******99887777669999999********* PP

                  XXXXXXXXXXX CS
  SRP-alpha_N 279 gefvlkdldde 289
                  ge+v+ dl+ +
   EPX71233.1 219 GEVVIGDLETD 229
                  ********986 PP

>> SRP54_N  SRP54-type protein, helical bundle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.5   0.1     2e-12   2.1e-09       7      74 ..     243     309 ..     238     310 .. 0.96
   2 ?   -2.2   0.0       4.8   5.1e+03       4      22 ..     445     463 ..     444     473 .. 0.70

  Alignments for each domain:
  == domain 1  score: 37.5 bits;  conditional E-value: 2e-12
                 HHHHHHCCSSCGHHHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHCTTSS-HHHHHHHHHHHH CS
     SRP54_N   7 salkklsgkskideedleealkeleeaLleaDVgvkvvkklienvkkkavgekklkpkqqvkkivkde 74 
                 s++++l g++ ++eedl+ +lk+++e+ ++++V+ ++  +l+++vkk+ +g kk+++ ++vk++v+d+
  EPX71233.1 243 SFFSGLIGGKYLKEEDLDPVLKKVQEHIVQKNVANSISLELCKSVKKSLIG-KKVSSFESVKQTVNDA 309
                 68999**********************************************.9************995 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 4.8
                 HHHHHHHHHCCSSCGHHHH CS
     SRP54_N   4 klnsalkklsgkskideed 22 
                 +l + l k+++++k+d+ +
  EPX71233.1 445 RLMGSLEKFTKATKLDKIF 463
                 6777888888888888654 PP

>> CbiA  CobQ/CobB/MinD/ParA nucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.2   4.7e-07   0.00049       9      69 ..     350     472 ..     345     506 .. 0.67

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 4.7e-07
                 TSSHHHHHHHHHHHHHHTT--EEEEEEEESSCCCCHHTTEB-HHHH..................................................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..................................................... RF
        CbiA   9 GvGKTtlaanLaralarrglrVllvDaDpqannlaileglendiep..................................................... 54 
                 GvGK+t++a+La  l  +++r+l+  +D+ ++ +  +e+l   +++                                                     
  EPX71233.1 350 GVGKSTTLAKLAYWLLSNNFRILVAACDTFRSGA--IEQLGVHVKNlqslkgssielfaqgygkdssfvvknavdyakknsfdvilidtagrrhndqrl 446
                 9***************************985553..455555555567788888888888888888888888888888888888888888888865555 PP

                 ...........CCHCCCHHHHHHCHC CS
                 ...........xxxxxxxxxxxxxxx RF
        CbiA  55 ...........dlkrllellealgkk 69 
                             l+++ +++eal+++
  EPX71233.1 447 mgslekftkatKLDKIFQVAEALVGT 472
                 55555555555444444444444444 PP

>> AAA_31  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.0   4.8e-05      0.05      12      40 ..     350     378 ..     342     397 .. 0.86
   2 ?    3.7   0.0     0.048        50     102     125 ..     412     436 ..     387     440 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 4.8e-05
      AAA_31  12 GvGKTTtsvnlaaalaklgkkvLlvDlDp 40 
                 GvGK+Tt  +la++l +++ ++L+  +D+
  EPX71233.1 350 GVGKSTTLAKLAYWLLSNNFRILVAACDT 378
                 9***********************99997 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.048
      AAA_31 102 kkeeilkellekvkde.YDyiiiDc 125
                 ++  ++k++++  k++ +D+i+iD+
  EPX71233.1 412 DSSFVVKNAVDYAKKNsFDVILIDT 436
                 33666899999887766*******8 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       6.4   6.7e+03     144     167 ..     157     180 ..     147     192 .. 0.70
   2 !   18.4   0.0   1.3e-06    0.0014       2      75 ..     340     438 ..     339     458 .. 0.71

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 6.4
      AAA_24 144 kytrlepklgkktanelkeevDlv 167
                    + +p+ +kk ++el+ + D +
  EPX71233.1 157 HTSKQAPSTSKKGKKELRRWDDQL 180
                 445677888888888888887765 PP

  == domain 2  score: 18.4 bits;  conditional E-value: 1.3e-06
      AAA_24   2 klkiliyGpsgiGKTtlakel.....gpkplfi....dtek.Glksldadkfpdie.....swedfldevvel..................aaeladyk 67 
                 ++ i ++G +g+GK+t++++l      +++ ++    dt++ G+ +  + ++++++     s         el                  +a+++ ++
  EPX71233.1 340 PYTISLIGVNGVGKSTTLAKLaywllSNNFRILvaacDTFRsGAIEQLGVHVKNLQslkgsS--------IELfaqgygkdssfvvknavdYAKKNSFD 430
                 68899****************89998444443345556666444444444444444444443........3334445555588888889999******* PP

      AAA_24  68 tlviDtid 75 
                 ++ iDt++
  EPX71233.1 431 VILIDTAG 438
                 ******87 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   1.2e-06    0.0012      20     131 ..     331     438 ..     313     453 .. 0.82

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 1.2e-06
                 HHHGGG-S-SEEEEEEE-TTSSHHHHHHHHHHHHHCTT--EEEEEE------------------HCCCTSTTEEEEEE-----HHHHHHHHHHHHHHHH CS
        MeaB  20 erllakaGraqvvGltGvPGaGkstlvealglelrrrGkrvavlavDPsspftGGsilGDklRleelavdegvfiRslpsrGalGGlaaktrevvllle 118
                 +++ ++  r   + l Gv G+Gkst++ +l+  l ++  r+ v a D   +f  G+i    + +++l+  +g  i    ++G     +   +++v    
  EPX71233.1 331 RAVQKNEDRPYTISLIGVNGVGKSTTLAKLAYWLLSNNFRILVAACD---TFRSGAIEQLGVHVKNLQSLKGSSIELF-AQGYGKDSSFVVKNAVDYAK 425
                 445566778889*********************************99...6889999777788888888888888654.56776777888889999999 PP

                 HTT-SEEEEEEES CS
        MeaB 119 aaGfDvvlietvG 131
                    fDv+li+t G
  EPX71233.1 426 KNSFDVILIDTAG 438
                 9999999999988 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   4.1e-06    0.0044       6     134 ..     341     476 ..     336     478 .. 0.60

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 4.1e-06
      AAA_22   6 gilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelka........erlsseellealeqalraravielli 96 
                 + + ++G  G+GK+t+l++l+++l   ++    r  v+ ++   s+  ++l  + +++l++ + +        ++++s+ +++   +++++ +   +++
  EPX71233.1 341 YTISLIGVNGVGKSTTLAKLAYWLLSNNF----RILVAACDTFRSGAIEQLGVH-VKNLQSLKGSsielfaqgYGKDSSFVVKNAVDYAKKNSF-DVIL 433
                 56889*******************76533....333334444444433333222.222222222235566666677888888888888888888.8999 PP

      AAA_22  97 iDEaqhlr..s..eealeeLrsllnl.srkgvqliLvGtpelr 134
                 iD a +    +  +  le++ +  +l + ++v+  LvGt +l+
  EPX71233.1 434 IDTAGRRHndQrlMGSLEKFTKATKLdKIFQVAEALVGTDSLA 476
                 9988774224135444444433333234777777777777665 PP

>> ArsA_ATPase  Anion-transporting ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.2      0.27   2.9e+02      56      81 ..     125     152 ..     111     188 .. 0.65
   2 ?   -2.2   0.1       1.7   1.8e+03     187     214 ..     292     319 ..     256     337 .. 0.53
   3 !    7.7   0.0    0.0017       1.8       6      38 ..     345     377 ..     341     381 .. 0.88
   4 !    7.2   0.0    0.0024       2.5     106     148 ..     410     453 ..     386     486 .. 0.74

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.27
                  EEET..SSEEEEE--HHHHHHHHHCCHH CS
  ArsA_ATPase  56 tkvk..eNLsavEidpeveleeakqevq 81 
                   kv+  eNL+  E++ +++ +   ++  
   EPX71233.1 125 SKVSdkENLTSNEVNRQEKNKALPRQQP 152
                  4565579999999999965544433322 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1.7
                  HHHHHHHHHHHHHHHTSTTTEEEEEEEE CS
  ArsA_ATPase 187 leetkeeikkveeiltdpertsfrlVvi 214
                  + +++ ++++v+++++d  r +++ +++
   EPX71233.1 292 IGKKVSSFESVKQTVNDAFRETLTQILT 319
                  2344455555555555555555555444 PP

  == domain 3  score: 7.7 bits;  conditional E-value: 0.0017
                  EEESTTSSHHHHHHHHHHHHHHTTS-EEEEE-S CS
  ArsA_ATPase   6 vgGKGGVGKttvsaatavklsekgkkvllistD 38 
                  + G  GVGK+t  a +a++l  ++ ++l+ + D
   EPX71233.1 345 LIGVNGVGKSTTLAKLAYWLLSNNFRILVAACD 377
                  55778***********************98877 PP

  == domain 4  score: 7.2 bits;  conditional E-value: 0.0024
                  THHHHHHHHHHHHHHHCSSSSEEEEESBSCCHT.CGGGGHHHHH CS
  ArsA_ATPase 106 GideilsfeellkyvkeeeydvvvlDtaPTGht.lrllslpevl 148
                  G d  +  ++ ++y k++ +dv+++Dta   h   rl+   e +
   EPX71233.1 410 GKDSSFVVKNAVDYAKKNSFDVILIDTAGRRHNdQRLMGSLEKF 453
                  66888889999*****************8766435666555544 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       5.1   5.3e+03      72     121 ..      27      84 ..       4     102 .. 0.44
   2 ?   -3.2   0.0       9.3   9.8e+03      89     106 ..     168     185 ..     138     212 .. 0.70
   3 ?   13.8   0.0   5.4e-05     0.057      19      76 ..     335     387 ..     321     465 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 5.1
      AAA_16  72 laqalareellrqlldeaesaeleawrekleeala............avpelagaea...srlle 121
                  +q+l+ e +l + ++++++  ++++  +++e+++                   a +   ++ll+
  EPX71233.1  27 CLQVLFYEAFLSERKNMETTFHQDRFTIQFQESIQngivfavafqdaK------A-EaftQSLLN 84 
                 444454445555555554444444444444444445544543322111......1.123333333 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 9.3
      AAA_16  89 aesaeleawrekleeala 106
                 + ++el++w+++l+ + +
  EPX71233.1 168 KGKKELRRWDDQLTNEEE 185
                 455678888888877766 PP

  == domain 3  score: 13.8 bits;  conditional E-value: 5.4e-05
      AAA_16  19 vrsgrpelvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipysalaqal 76 
                  +++rp  + l+G  GvGKs+ + +l+  l  +++  l + cd ++s+      +++l
  EPX71233.1 335 KNEDRPYTISLIGVNGVGKSTTLAKLAYWLLSNNFRILVAACDTFRSG-----AIEQL 387
                 4567778999*****************777777788899999999443.....44444 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   4.3e-05     0.045      22     100 ..     344     440 ..     329     465 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 4.3e-05
      AAA_30  22 vltGpAGtGKttalkalreaweaaggrviglAptgkaAkvLaeelgieastiakllkrlk...................grarlepgtllivDEagmv 100
                  l G+ G GK+t+l++l+  + ++++r++++A     + +++ +lg++ +++++l  +                     + a+ ++ +++++D ag  
  EPX71233.1 344 SLIGVNGVGKSTTLAKLAYWLLSNNFRILVAACDTFRSGAIE-QLGVHVKNLQSLKGSSIelfaqgygkdssfvvknavDYAKKNSFDVILIDTAGRR 440
                 578******************************999999988.8899999999888655577777788888888887764334444488888888765 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   1.0    0.0002      0.21       2      86 ..     343     469 ..     342     497 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.0002
                 EEEEESTTSSHHHHHHHHH.....TS.TEEE.SSSTTSSSSEEEEEEEETTEE...................................EEEEECGGCSS CS
    MMR_HSR1   2 vaivGrpNvGKStLinalt.....ge.kaiv.sdkpgtTrdinegrvklkgke...................................ielvDtpGlie 58 
                 + ++G   vGKSt + +l      ++ +  v +   +    i++  v++k+ +                                   ++l+Dt+G  +
  EPX71233.1 343 ISLIGVNGVGKSTTLAKLAywllsNNfRILVaACDTFRSGAIEQLGVHVKNLQslkgssielfaqgygkdssfvvknavdyakknsfdVILIDTAGRRH 441
                 7899**************8555543344444133345555555555554442245666677777788888888888888888888888********334 PP

                 HHHHHHHHHHHHHHHHCTSEEEEEEETT CS
    MMR_HSR1  59 gaseekglgkaflaleeadlillvvdas 86 
                 ++++  g  ++f +  + d i+ v +a 
  EPX71233.1 442 NDQRLMGSLEKFTKATKLDKIFQVAEAL 469
                 4444448999999999999999998854 PP

>> Fer4_NifH  4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.1      0.92   9.7e+02     184     231 ..     101     150 ..      91     161 .. 0.80
   2 ?   11.7   0.0   0.00012      0.13       3      38 ..     343     378 ..     341     393 .. 0.92

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.92
   Fer4_NifH 184 rkvddereliekfaeelgtkv..levvPrdeivrkaelrkktvieyapes 231
                 ++  +e+++i++f+   + k+  l +v  +e+++ +e++++  ++  p++
  EPX71233.1 101 KDFPSEDDIIRNFVPLYNAKLsqLSKVSDKENLTSNEVNRQEKNKALPRQ 150
                 66778999*****9988877644889999999*****9999877766655 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 0.00012
   Fer4_NifH   3 iaiyGkGGiGksttsqnlsaalaemgkkvlivGCDP 38 
                 i++ G  G+Gkstt++ l+  l +++ ++l+  CD 
  EPX71233.1 343 ISLIGVNGVGKSTTLAKLAYWLLSNNFRILVAACDT 378
                 7788999***************************95 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   0.00017      0.18       3      74 ..     345     444 ..     343     469 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00017
                 EESSTTSSHHHHHHHHHHHH...THEEEEEETTTCSSS..........................STTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHH CS
         AAA   3 lyGppGtGKTllakavakel...gvefleisgsellsk..........................yvgesekkirelfkeakekakpsilfiDEidalak 72 
                 l+G  G+GK+++   +a  l   ++++l   + +++s                           y ++s+  +++ ++ ak+++   +++iD + + ++
  EPX71233.1 345 LIGVNGVGKSTTLAKLAYWLlsnNFRILVAACDTFRSGaieqlgvhvknlqslkgssielfaqgYGKDSSFVVKNAVDYAKKNS-FDVILIDTAGRRHN 442
                 89*******8877777777645446666666666665578888888888888888889999998999999999*******9998.9******8776665 PP

                 HH CS
         AAA  73 sr 74 
                 ++
  EPX71233.1 443 DQ 444
                 55 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.1         1   1.1e+03      22      54 ..      78     111 ..      69     128 .. 0.69
   2 ?   -1.2   0.1       1.9     2e+03      77     109 ..     300     330 ..     263     336 .. 0.72
   3 ?   10.0   0.0   0.00064      0.67       5      43 ..     343     381 ..     339     410 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 1
      AAA_14  22 likellvkkesilyinldderdkkladpe..klle 54 
                 + ++ll ++ + ++inl +e++k+++ p+  ++++
  EPX71233.1  78 FTQSLL-NSMHNIFINLYQEQLKNKDFPSedDIIR 111
                 444444.8889999***999998776543223333 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 1.9
      AAA_14  77 pewekalkslvdegknldvivtGSnskllskei 109
                 +++++++++ ++  + l  i+t S s++l++ i
  EPX71233.1 300 ESVKQTVNDAFR--ETLTQILTPSTSLDLLHSI 330
                 333333333333..4488889999998888876 PP

  == domain 3  score: 10.0 bits;  conditional E-value: 0.00064
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyinldderd 43 
                 + + G+  vGK+t l +l++ ll ++ +il  ++d+ r 
  EPX71233.1 343 ISLIGVNGVGKSTTLAKLAYWLLSNNFRILVAACDTFRS 381
                 6789***************99998888999999988666 PP

>> HMG_CoA_synt_C  Hydroxymethylglutaryl-coenzyme A synthase C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0      0.14   1.4e+02      83     131 ..      24      68 ..      10      96 .. 0.70
   2 ?   -1.6   0.0       1.6   1.7e+03      96     149 ..     227     280 ..     217     325 .. 0.67
   3 ?    8.4   0.1    0.0014       1.5     173     249 ..     392     468 ..     383     491 .. 0.74

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.14
                     HHHHHHHHHHHHHHH.S-HHHHHHH-GGGGGGTT--GGGGGT-HHHHHH CS
  HMG_CoA_synt_C  83 vqkslarllynDflanassdkeeevkekleekddlkldesltdkdleka 131
                      qk l +l+y+ fl+++++ +++  ++++    +++++es+++  + ++
      EPX71233.1  24 CQKCLQVLFYEAFLSERKNMETTFHQDRF----TIQFQESIQNGIVFAV 68 
                     79*************99975544444444....3557888777766554 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.6
                     HH.S-HHHHHHH-GGGGGGTT--GGGGGT-HHHHHHHHHHHHHHHHHHTGGGGH CS
  HMG_CoA_synt_C  96 lanassdkeeevkekleekddlkldesltdkdlekallkiakelfkkkvkpsll 149
                      +++++++ +  ++ ++ +++l   + l++ dl+ +l k+ +++ +k v++s+ 
      EPX71233.1 227 ETDPNQNSATTSSSAFSFFSGLIGGKYLKEEDLDPVLKKVQEHIVQKNVANSIS 280
                     555555555555555555566666666666666666666666666666655543 PP

  == domain 3  score: 8.4 bits;  conditional E-value: 0.0014
                     S-HHHHTT-EEEEEEEETTTEEEEEEEEE-S--STTSHHHHHTTTTHHHHHHTSEEE-HHHHHHHHHHHHHHTT--S CS
  HMG_CoA_synt_C 173 vsadelagkriglfsYGsGlaaslfslrvkqdvsedsildiakvldlkkkLdsRkevtPeefeealelrekahlkkn 249
                     ++ ++l+g++i lf+ G G  +s+   +  + ++++s   i   +  +++ d+R + + e+f++a +l + +  ++ 
      EPX71233.1 392 KNLQSLKGSSIELFAQGYGKDSSFVVKNAVDYAKKNSFDVILIDTAGRRHNDQRLMGSLEKFTKATKLDKIFQVAEA 468
                     45689*****************9887776666666444445444445555699**********99998776665554 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00044      0.47      13      32 ..     342     361 ..     337     467 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00044
                 EEEEEESTTSSHHHHHHHHT CS
                 xxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  13 kvaivGenGaGKStLlklla 32 
                 ++ ++G nG GKSt l+ la
  EPX71233.1 342 TISLIGVNGVGKSTTLAKLA 361
                 5789**********998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (545 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1323  (0.0737911); expected 358.6 (0.02)
Passed bias filter:                      526  (0.0293379); expected 358.6 (0.02)
Passed Vit filter:                        77  (0.00429472); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.69u 0.27s 00:00:00.96 Elapsed: 00:00:00.45
# Mc/sec: 3601.85
//
Query:       EPX71234.1  [L=248]
Description: methyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.9e-24   84.0   0.0    1.2e-23   83.7   0.0    1.1  1  Methyltransf_23  Methyltransferase domain
    1.1e-10   42.1   0.0    1.7e-10   41.4   0.0    1.3  1  Methyltransf_25  Methyltransferase domain
    4.5e-09   36.8   0.0    7.3e-09   36.2   0.0    1.3  1  Methyltransf_11  Methyltransferase domain
    8.4e-09   36.1   0.0    1.3e-08   35.5   0.0    1.3  1  Methyltransf_12  Methyltransferase domain
      7e-08   32.4   0.0    9.3e-08   32.0   0.0    1.2  1  Methyltransf_31  Methyltransferase domain
    8.5e-06   25.3   0.0    2.1e-05   24.0   0.0    1.6  1  Ubie_methyltran  ubiE/COQ5 methyltransferase family
     0.0005   19.7   0.0    0.00078   19.0   0.0    1.2  1  MTS              Methyltransferase small domain
      0.004   16.7   0.0     0.0047   16.5   0.0    1.2  1  Methyltransf_PK  AdoMet dependent proline di-methyltransferas
  ------ inclusion threshold ------
      0.016   15.0   0.0      0.022   14.5   0.0    1.2  1  PCMT             Protein-L-isoaspartate(D-aspartate) O-methyl
       0.03   13.6   0.0      0.041   13.2   0.0    1.2  1  CMAS             Mycolic acid cyclopropane synthetase
       0.05   12.7   0.0        1.4    8.0   0.0    2.2  1  Pox_MCEL         mRNA capping enzyme
      0.068   13.5   0.9        4.2    7.8   0.1    2.3  2  UPF0223          Uncharacterised protein family (UPF0223)
      0.079   11.9   0.0       0.11   11.4   0.0    1.2  1  Methyltransf_9   Protein of unknown function (DUF1698)


Domain annotation for each model (and alignments):
>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.7   0.0     9e-27   1.2e-23      14     163 ..      76     232 ..      62     234 .. 0.91

  Alignments for each domain:
  == domain 1  score: 83.7 bits;  conditional E-value: 9e-27
  Methyltransf_23  14 erllpklraggrvLdiGcGtGillevlrengf.svtgvDlspeaveiae.....kakkaqkdqfdeqeaaepqg.kfdlIvlrevlehvpdppe 100
                      +r++  ++a+grvL+iG G G++ + ++ ++  s+ +v++s+e++++a+     k + +++ + +++++++p++ +fd+Iv++++l++ +   e
       EPX71234.1  76 LRFFHLRNAKGRVLEIGSGPGSNFSFYKWKQIqSLSLVEPSEEMHKLASsraekKVPESVHLKQYSDFEEVPKEsSFDTIVQTFCLCSQEKAVE 169
                      5777789******************99888887999**************9999777777777777777777777******************* PP

  Methyltransf_23 101 llrqiatllkpgGylllseplaslk.edrllldwlylvpagrhisffsarslkelleeaGlevv 163
                       l++++++l+pgG +ll e+++s + +++++l+  ++ + ++++++++ r++ el ee++le++
       EPX71234.1 170 SLNNAKEMLRPGGQILLIEHGQSKYgWLNKILNTYAESHYEDWGCVWN-RNILELIEESNLELD 232
                      **********************9988**********************.************986 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.4   0.0   1.3e-13   1.7e-10       1      97 []      88     182 ..      88     182 .. 0.87

  Alignments for each domain:
  == domain 1  score: 41.4 bits;  conditional E-value: 1.3e-13
                      EEEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTT.TEEEEE.SBCCGBSSSTTTEEEEEEESTGGGSSHHHHHHHHHHHHHH CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeegl.nvefvq.gdaedlpfedgsfDlvvssgalhhlsdedlekalkeiarv 92 
                      vL++G G+G +      + + +++  v++seem + a +rae++ + +v++ q  d+e++p e+ sfD +v +++  ++s+e++ + l++++++
       EPX71234.1  88 VLEIGSGPGSNFSFYKWK-QIQSLSLVEPSEEMHKLASSRAEKKVPeSVHLKQySDFEEVPKES-SFDTIVQTFC--LCSQEKAVESLNNAKEM 177
                      9********877666655.469*******************98877999997758999999765.*******866..667889999******** PP

                      EEEEE CS
  Methyltransf_25  93 LkpgG 97 
                      L+pgG
       EPX71234.1 178 LRPGG 182
                      ****9 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.2   0.0   5.3e-12   7.3e-09       1      95 [.      89     185 ..      89     186 .. 0.89

  Alignments for each domain:
  == domain 1  score: 36.2 bits;  conditional E-value: 5.3e-12
                      EEET-TTSHHHHHHH.HTTSEEEEEES-HHHHHHHHHHCCHHT-.EEEE.TTEECCCTSS-TT-EEEEEEES-CCC-CCHHHHHHHHHHHEEEE CS
  Methyltransf_11   1 LdvGcGtGrlaeala.krgarvvgvDlskemlklakekaseegl.kvef.vvadaeklpfednsfDlvvssevlhhvedpekalkeiaRvLkpg 91 
                      L++G+G G+++  ++ k+  ++  v++s+em+kla+++a+++ + +v + + +d+e++p +++sfD +v +++l+  e+  + l++++ +L+pg
       EPX71234.1  89 LEIGSGPGSNFSFYKwKQIQSLSLVEPSEEMHKLASSRAEKKVPeSVHLkQYSDFEEVP-KESSFDTIVQTFCLCSQEKAVESLNNAKEMLRPG 181
                      89************98888****************999998877744442668999999.566******************************* PP

                      EEEE CS
  Methyltransf_11  92 Gllv 95 
                      G ++
       EPX71234.1 182 GQIL 185
                      *986 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.5   0.0   9.4e-12   1.3e-08       1      99 []      89     184 ..      89     184 .. 0.88

  Alignments for each domain:
  == domain 1  score: 35.5 bits;  conditional E-value: 9.4e-12
  Methyltransf_12   1 LeiGcGtGsllralleklpdieyt.gvDispsaiedakeklakrennnnnnvelealdlldldgg.ssfDlvvasnvlhhlkdirevldnirkl 92 
                      LeiG+G Gs+ +    k  +i+ +  v++s+++ + a+ +  k+     + v+l++ +++++ ++ ssfD++v  ++l+  ++  e+l+n++++
       EPX71234.1  89 LEIGSGPGSNFSFYKWK--QIQSLsLVEPSEEMHKLASSRAEKKV---PESVHLKQYSDFEEVPKeSSFDTIVQTFCLCSQEKAVESLNNAKEM 177
                      8*************999..888888*********66666666655...5678888888887777789*************************** PP

  Methyltransf_12  93 LkpgGrl 99 
                      L+pgG++
       EPX71234.1 178 LRPGGQI 184
                      *****96 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.0   0.0   6.8e-11   9.3e-08       5     114 ..      86     196 ..      82     233 .. 0.76

  Alignments for each domain:
  == domain 1  score: 32.0 bits;  conditional E-value: 6.8e-11
  Methyltransf_31   5 lrvlDlGCGtGeltfelaeelgpkae.vvGiDiseeaielArenaqklgldnveFeq.gdieeleklledekfDlilsnevlnaladpdkilee 96 
                       rvl++G+G G           ++++ + +++ see+ +lA ++a+k+  + v+++q +d+ee +k    ++fD i+    l+ +    + l++
       EPX71234.1  86 GRVLEIGSGPGSNFSFYK---WKQIQsLSLVEPSEEMHKLASSRAEKKVPESVHLKQySDFEEVPKE---SSFDTIVQTFCLCSQEKAVESLNN 173
                      689999999987543333...23444489****************************9*******65...9*******9999************ PP

  Methyltransf_31  97 iervlkpggilliedpr.....l 114
                      +++ l+pgg +l+ ++      +
       EPX71234.1 174 AKEMLRPGGQILLIEHGqskygW 196
                      *********99998887444432 PP

>> Ubie_methyltran  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.0   1.5e-08   2.1e-05      71     171 ..     106     206 ..      42     219 .. 0.77

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 1.5e-08
                      HHHEEEEEES-HHHHHHHHHHHHHHTSSTEEEEE--TTT-TTS-T-EEEEEEES-GGG-S-HHHHHHHHHHHEEEEEEEEEEEE----SHHHHH CS
  Ubie_methyltran  71 ekgkvvvlDinenmLkvgekklkeegkinieflqanaeeLpfeddsfDvvtvsfGlrnvtDklkaLkeayrvlkpGGrlvvlefskvelpllsq 164
                      +   + +++ +e+m k +  +++++   ++++ q +  e   ++ sfD++  +f l       ++L++a  +l+pGG+++ +e  + +   l++
       EPX71234.1 106 QIQSLSLVEPSEEMHKLASSRAEKKVPESVHLKQYSDFEEVPKESSFDTIVQTFCLCSQEKAVESLNNAKEMLRPGGQILLIEHGQSKYGWLNK 199
                      3346788999*********************99876655555678*****************************************99999999 PP

                      HHHHHHH CS
  Ubie_methyltran 165 ayelysk 171
                        ++y+ 
       EPX71234.1 200 ILNTYAE 206
                      8888875 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.0   5.6e-07   0.00078      27     146 ..      81     195 ..      73     210 .. 0.75

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 5.6e-07
                 CHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC.EEEEE.-STTTTSTTS-EEEEEE---STTTCHCHHHHHHHHHH CS
         MTS  27 lpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle.vevva.sdvleeveekkfdlivsNPPfhagkatelavaeelia 123
                 l + ++g+vl +G+G G     + k ++ +++ lv+ + +  ++a   +e++  e v++ + sd  e  +e +fd+iv    + ++++     a e ++
  EPX71234.1  81 LRN-AKGRVLEIGSGPGSNFS-FYKWKQIQSLSLVEPSEEMHKLASSRAEKKVPEsVHLKQySDFEEVPKESSFDTIVQTFCLCSQEK-----AVESLN 172
                 555.7899*********7433.33333333599999888888888888888888877777615555556699*******999988888.....667789 PP

                 HHHHHEEEEEEEEEEEETTSCHH CS
         MTS 124 eAkeaLkegGeLliVanrklgye 146
                 +Ake+L++gG++l++   + +y 
  EPX71234.1 173 NAKEMLRPGGQILLIEHGQSKYG 195
                 **************988777774 PP

>> Methyltransf_PK  AdoMet dependent proline di-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   3.4e-06    0.0047      41     162 ..      75     189 ..      53     233 .. 0.82

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 3.4e-06
  Methyltransf_PK  41 flkklkkeslpgkrevkvaldcGaGiGrvtknlLlkllskvDlvepvekflekakeelaeekkkvgkvyvvglqef..tPeegrYdliWiqWcv 132
                      fl+ ++ +     +   ++l++G+G G        k ++ + lvep e++ + a+ + ae kk   +v+     +f  +P+e ++d i   +c+
       EPX71234.1  75 FLRFFHLR-----NAKGRVLEIGSGPGSNFSFYKWKQIQSLSLVEPSEEMHKLAS-SRAE-KKVPESVHLKQYSDFeeVPKESSFDTIVQTFCL 161
                      55555544.....4456899*******99999999************99877766.4444.677777888888888667**************9 PP

  Methyltransf_PK 133 ghLtDedlvaflkrckkalkpnGlivvken 162
                         + e+ v+ l+ +k+ l+p+G i + e 
       EPX71234.1 162 C--SQEKAVESLNNAKEMLRPGGQILLIEH 189
                      7..6899****************9988664 PP

>> PCMT  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   1.6e-05     0.022      43     151 ..      53     160 ..      41     200 .. 0.72

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 1.6e-05
                 TSSS-EEEETTEEE--HHHHHHHHHHTT--T.T-EEEEES-TTSHHHHHHHHHHCTTCEEEEEESBHHHHHHHHHHHHHCTTCSEEEEES-GGGTTGGG CS
        PCMT  43 YedaplsigynatiSaphmvalalellelkk.garvLevGsGsGyltavlarlvgekgrvvsierikelveeakrnlkkldlenvivvvgDGrkGyeek 140
                 Y++++ + +   t  +     ++l + +l++ + rvLe+GsG G +    ++  + +  +  +e ++e+ + a+ + +k+  e+v+++     + ++++
  EPX71234.1  53 YNNIAEKYSKRITKEELFSGIYFLRFFHLRNaKGRVLEIGSGPGSNFSF-YKWKQIQS-LSLVEPSEEMHKLASSRAEKKVPESVHLKQYSDFEEVPKE 149
                 5555554444444444444556777888754167**********98764.44433333.3459*************************9999999**** PP

                 -SEEEEEESSB CS
        PCMT 141 aPYdaihvgaa 151
                 + +d+i+ + +
  EPX71234.1 150 SSFDTIVQTFC 160
                 ******98765 PP

>> CMAS  Mycolic acid cyclopropane synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0     3e-05     0.041      65     165 ..      87     187 ..      76     226 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 3e-05
                 EEEEES-TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHTS-SSS-EEEEES-GGG---.....--SEEEEES-GGGTSGGGHHHHHHHHHHHS-T CS
        CMAS  65 tlLdiGcGWGslvrraverydvkvvglTlSkeqaklakkrvdeldlerkvevklldyedlde.....kvdrvvsvgafehvgkenydtffkklkkllke 158
                 ++L+iG G Gs +     +   ++ +l l +  +++ k +  +++ +  ++v+l++y d++e      +d +v  + f    +e+  +  +++k++l++
  EPX71234.1  87 RVLEIGSGPGSNFSFYKWK---QIQSLSLVEPSEEMHKLASSRAEKKVPESVHLKQYSDFEEvpkesSFDTIV--QTFCLCSQEKAVESLNNAKEMLRP 180
                 79********999888777...566666655555555555555566666777777777777776688899997..56788899999999999******* PP

                 T-EEEEE CS
        CMAS 159 dGllllh 165
                 +G +ll 
  EPX71234.1 181 GGQILLI 187
                 **99874 PP

>> Pox_MCEL  mRNA capping enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.0   0.00098       1.4     142     183 ..     148     185 ..      65     194 .. 0.60

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.00098
    Pox_MCEL 142 yelkfdivslQFaiHYsFeseekartvlrNvaellasGGkvl 183
                 +e  fd +   F++     s+eka   l+N+ e+l++GG++l
  EPX71234.1 148 KESSFDTIVQTFCL----CSQEKAVESLNNAKEMLRPGGQIL 185
                 34456666555554....588888888999999999999876 PP

>> UPF0223  Uncharacterised protein family (UPF0223)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.1     0.003       4.2      17      40 ..      48      71 ..      46      88 .. 0.88
   2 ?    4.1   0.1     0.042        58      28      53 ..     126     151 ..     117     178 .. 0.74

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.003
                HHHHHHHHHHHHHTT-EEHHHHHH CS
     UPF0223 17 dVveffeavekayekgvereellk 40
                 Vv++++++ + y k++++eel +
  EPX71234.1 48 RVVSIYNNIAEKYSKRITKEELFS 71
                59******************9975 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.042
                 HHTT-EEHHHHHHHHHHHHHH---HH CS
     UPF0223  28 ayekgvereellkaYrrFkevvpsks 53 
                   ek+v +   lk+Y +F+ev ++ s
  EPX71234.1 126 RAEKKVPESVHLKQYSDFEEVPKESS 151
                 5689999999**********866544 PP

>> Methyltransf_9  Protein of unknown function (DUF1698)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0     8e-05      0.11     110     217 ..      80     186 ..      75     206 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 8e-05
                     GS.--TT-EEEEET-TTSHHHHHHHHCT-SEEEEE---HHH..HHHHHHHHCCTTTTSSEEEE---GGGS-T---EEEEEEES-GGG-S-HHHHH CS
  Methyltransf_9 110 hlsdlkgrtildvGcgnGyhlwrmvgegaklvvGidPself..liqfeavrkllgedqrahllplgieqlpeleafdtvfsmGvlyhrrsPldhl 202
                     hl + kgr +l++G g G        ++ ++   ++Pse    l   +a +k+  + + ++      e++p+ ++fdt+     l  ++  ++ l
      EPX71234.1  80 HLRNAKGR-VLEIGSGPGSNFSFYKWKQIQSLSLVEPSEEMhkLASSRAEKKVPESVHLKQY--SDFEEVPKESSFDTIVQTFCLCSQEKAVESL 171
                     56666665.67777777644333333444555557777643114444555555433333333..479**************************** PP

                     HHHHCTEEEEEEEEE CS
  Methyltransf_9 203 lqlkdqlvkgGelvl 217
                      + k+ l+ gG+++l
      EPX71234.1 172 NNAKEMLRPGGQILL 186
                     ***********9887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       605  (0.0337442); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 1886.95
//
Query:       EPX71235.1  [L=126]
Description: mRNA decapping complex regulatory subunit Dcp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.7e-33  113.1   0.1    7.5e-33  112.9   0.1    1.0  1  DCP1      Dcp1-like decapping family
  ------ inclusion threshold ------
      0.051   13.5   0.0       0.13   12.2   0.0    1.8  1  WH1       WH1 domain


Domain annotation for each model (and alignments):
>> DCP1  Dcp1-like decapping family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.9   0.1   8.3e-37   7.5e-33       2     116 ..       9     122 ..       8     123 .. 0.97

  Alignments for each domain:
  == domain 1  score: 112.9 bits;  conditional E-value: 8.3e-37
                 HHHHHHHHHHH-TTEEEEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEEETT.S-EEEEEEESSSS--EEEEESSGGGEEEETTEEEEEETTTEEEEE CS
        DCP1   2 kelnlrvLqrldpsiesildtashvvlYkfnessqeWektdieGtLfvvkrskepryglivlNrkslenliedltkelelelqgeyliyrteeeevfgi 100
                 +++nl+vL+ + p+i+s +d+ashv++Y+f+  sq+W+kt ieGt+f+vk ++  r+g+++lNr+s++nl++ ++   +++l ++yli++ ++++v+g+
  EPX71235.1   9 NAVNLQVLKFHYPTISSTVDIASHVAVYQFDIPSQQWVKTAIEGTFFLVKDQS-GRIGYVILNRNSPDNLYLFIDYPQNVHLVDRYLIHKLQDRQVVGL 106
                 789************************************************77.********************************************* PP

                 EESSHHHHHHHHHHHH CS
        DCP1 101 Wfyeeedreriasllk 116
                 W+++ +d +ri++ ++
  EPX71235.1 107 WMFDPNDMNRIYNRIS 122
                 ************9875 PP

>> WH1  WH1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   1.5e-05      0.13      13      55 ..      30      71 ..      21     125 .. 0.64

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.5e-05
                EEEEEEEEEETTTTCEEEECECEEEEEEEEETTTTEEEEEEEE CS
         WH1 13 savaqvyladpakketWikakhagavslvkdstqnsyflrlvk 55
                 + ++vy+ d   ++ W+k+   g+  lvkd++ +  +++l  
  EPX71235.1 30 ASHVAVYQFDIPSQQ-WVKTAIEGTFFLVKDQSGRIGYVILNR 71
                46799****999999.****************99986666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       447  (0.0249317); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 969.94
//
Query:       EPX71236.1  [L=115]
Description: helper-TIM [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.2e-14   51.7   8.9    1.9e-13   50.7   8.9    1.4  1  zf-CHY          CHY zinc finger
  ------ inclusion threshold ------
      0.042   13.6   0.4      0.042   13.6   0.4    2.9  3  zinc_ribbon_2   zinc-ribbon domain
       0.07   12.9   3.8       0.21   11.3   3.8    1.9  1  zinc_ribbon_10  Predicted integral membrane zinc-ribbon metal
       0.21   11.5   6.8      0.045   13.6   3.4    1.7  2  ADD_ATRX        Cysteine Rich ADD domain
       0.27   11.3   8.7       0.18   11.9   5.0    2.4  2  DZR             Double zinc ribbon
        0.3   11.4   9.3       0.56   10.5   4.1    2.7  2  zinc_ribbon_9   zinc-ribbon
       0.38   11.3   2.9        1.1    9.8   0.2    2.5  2  Trm112p         Trm112p-like protein
       0.82   10.4   7.9        1.8    9.3   8.0    1.6  1  RecQ_Zn_bind    RecQ zinc-binding
        1.2    9.0   7.1        9.3    6.1   0.1    2.6  2  Cys_rich_KTR    Cysteine-rich KTR
        1.5    8.9   6.0        4.5    7.3   6.0    1.8  1  HypA            Hydrogenase/urease nickel incorporation, meta
        2.8    7.9  11.4        1.8    8.6   0.5    3.3  3  zinc_ribbon_4   zinc-ribbon domain
          8    6.7   9.4       0.17   12.0   1.2    2.3  2  Zn-ribbon_8     Zinc ribbon domain


Domain annotation for each model (and alignments):
>> zf-CHY  CHY zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.7   8.9   1.2e-16   1.9e-13       1      74 [.       2      72 ..       2      74 .. 0.85

  Alignments for each domain:
  == domain 1  score: 50.7 bits;  conditional E-value: 1.2e-16
      zf-CHY  1 CkHykravvairapcCkklyaCreCHeeledhelerlevkevlcllCeteqekavlCkkCkkefaeyfCpiCkl 74
                CkH+ +a+v+ir++cC+++ +C +CH+e++dh+l r+ +++++c++C+++    v  ++   + +e+ Cp+C++
  EPX71236.1  2 CKHILNAQVSIRTACCRRWVDCIQCHDEVADHPLLRTPEMTLICKKCRKA--FRVHFGEEMDDSDEF-CPNCDN 72
                ***********************************************996..333334444566666.999986 PP

>> zinc_ribbon_2  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1      0.94   1.4e+03       2      10 ..      23      31 ..      23      33 .. 0.64
   2 ?    0.7   0.4      0.33   4.9e+02       2       6 ..      45      49 ..      44      51 .. 0.71
   3 ?   13.6   0.4   2.8e-05     0.042       6      19 ..      57      70 ..      57      70 .. 0.97

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.94
  zinc_ribbon_2  2 CpnCGaelq 10
                   C +C+ e+ 
     EPX71236.1 23 CIQCHDEVA 31
                   667776665 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.33
  zinc_ribbon_2  2 CpnCG 6 
                   C++C 
     EPX71236.1 45 CKKCR 49
                   88885 PP

  == domain 3  score: 13.6 bits;  conditional E-value: 2.8e-05
  zinc_ribbon_2  6 GaelqdnakFCpyC 19
                   G+e +d + FCp+C
     EPX71236.1 57 GEEMDDSDEFCPNC 70
                   899*********** PP

>> zinc_ribbon_10  Predicted integral membrane zinc-ribbon metal-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   3.8   0.00014      0.21      17      51 ..      37      71 ..      17      75 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00014
  zinc_ribbon_10 17 aknryalICskChshnGlapkeeleevkyrCpkCg 51
                     ++ + lIC+kC++ + +   ee ++    Cp+C 
      EPX71236.1 37 RTPEMTLICKKCRKAFRVHFGEEMDDSDEFCPNCD 71
                    566789**********99999******888****6 PP

>> ADD_ATRX  Cysteine Rich ADD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   3.4     3e-05     0.045      14      45 ..      14      50 ..       4      55 .. 0.74
   2 ?   -2.4   0.1         3   4.5e+03      40      49 ..      67      76 ..      66      81 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 3e-05
    ADD_ATRX 14 CtaCgqqvnhfq.kdslykHPvLk....VLiCksCfk 45
                 + C + v+ +q  d +  HP+L+     LiCk+C+k
  EPX71236.1 14 TACCRRWVDCIQcHDEVADHPLLRtpemTLICKKCRK 50
                3445566888775799*******844446******98 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 3
    ADD_ATRX 40 CksCfkyyss 49
                C +C ++y  
  EPX71236.1 67 CPNCDNHYVV 76
                7788887765 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.7     0.087   1.3e+02      30      38 ..      22      30 ..       1      36 [. 0.64
   2 ?   11.9   5.0   0.00012      0.18       1      36 [.      23      72 ..      23      78 .. 0.79

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.087
         DZR 30 rCpsCgekv 38
                 C +C+ +v
  EPX71236.1 22 DCIQCHDEV 30
                566666654 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 0.00012
         DZR  1 CpqCgee........lppdarfCseCgtklkavaa........edrCpsCge 36
                C qC+ e        +p+    C++C+++ +   +         ++Cp+C+ 
  EPX71236.1 23 CIQCHDEvadhpllrTPEMTLICKKCRKAFRV--HfgeemddsDEFCPNCDN 72
                9999999999999988888889*******983..234777777888888865 PP

>> zinc_ribbon_9  zinc-ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   2.3     0.077   1.2e+02       5      31 ..      23      52 ..      16      55 .. 0.78
   2 ?   10.5   4.1   0.00038      0.56       7      32 ..      47      75 ..      45      77 .. 0.70

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.077
  zinc_ribbon_9  5 ChqCdrfVsvspd.edsd.v.lCPhCgggF 31
                   C qC  +V  +p   +++ + +C  C+  F
     EPX71236.1 23 CIQCHDEVADHPLlRTPEmTlICKKCRKAF 52
                   6789999988888644444358****9988 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00038
  zinc_ribbon_9  7 qCdrfVsvspd...edsdvlCPhCgggFV 32
                    C+++++v+     +dsd +CP+C++  V
     EPX71236.1 47 KCRKAFRVHFGeemDDSDEFCPNCDNHYV 75
                   57777777533223777789*****9876 PP

>> Trm112p  Trm112p-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.2   0.00077       1.1      51      66 ..      40      55 ..       2      57 .. 0.80
   2 ?    1.4   0.2      0.32   4.8e+02      56      65 ..      67      76 ..      66      78 .. 0.87

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00077
                CCEEEETTTTEEEEEE CS
     Trm112p 51 egeLvCpncgraYpIk 66
                e +L+C++c+ a+++ 
  EPX71236.1 40 EMTLICKKCRKAFRVH 55
                579**********985 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.32
                ETTTTEEEEE CS
     Trm112p 56 CpncgraYpI 65
                Cpnc+ +Y +
  EPX71236.1 67 CPNCDNHYVV 76
                ******9987 PP

>> RecQ_Zn_bind  RecQ zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   8.0    0.0012       1.8      30      64 ..      40      72 ..      13      72 .. 0.76

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.0012
  RecQ_Zn_bind 30 amlaycentteCrrkllleyFgeeaaee..eCgnCDn 64
                  +m+  c   ++Cr+ ++  +Fgee +++  +C nCDn
    EPX71236.1 40 EMTLIC---KKCRK-AFRVHFGEEMDDSdeFCPNCDN 72
                  566666...55876.56789***9888788******9 PP

>> Cys_rich_KTR  Cysteine-rich KTR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   3.6     0.033        49       2      37 ..      19      52 ..      18      60 .. 0.77
   2 ?    6.1   0.1    0.0062       9.3      29      41 ..      66      78 ..      58      82 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.033
  Cys_rich_KTR  2 eWvlcPvCgnkTRlkiredTvLknfpLfCPKCkqet 37
                  +Wv c  C+    ++   +T   +  L C KC++  
    EPX71236.1 19 RWVDCIQCHDEVADHPLLRT--PEMTLICKKCRKAF 52
                  68888888887777777766..47889******865 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0062
  Cys_rich_KTR 29 fCPKCkqetlinv 41
                  fCP C +++++n+
    EPX71236.1 66 FCPNCDNHYVVNA 78
                  9*****9999997 PP

>> HypA  Hydrogenase/urease nickel incorporation, metallochaperone, hypA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   6.0     0.003       4.5      65      96 ..      37      74 ..       2      82 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.003
                EEE--EEEETTTS-EEECHH....H..HHS-TTTSSS- CS
        HypA 65 eevpvkvrCreCgkefelee....k..alrCpkCgsad 96
                ++ ++++ C++C+k f+++     +  ++ Cp+C+++ 
  EPX71236.1 37 RTPEMTLICKKCRKAFRVHFgeemDdsDEFCPNCDNHY 74
                56788999999999998664333313444899999875 PP

>> zinc_ribbon_4  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.9      0.72   1.1e+03      26      32 ..      21      27 ..      17      29 .. 0.58
   2 ?    8.6   0.5    0.0012       1.8       1      14 [.      41      54 ..      41      55 .. 0.87
   3 ?    5.2   0.2     0.014        21       5      15 ..      67      77 ..      66      83 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.72
  zinc_ribbon_4 26 vrCskCg 32
                   v C  C 
     EPX71236.1 21 VDCIQCH 27
                   4555553 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0012
  zinc_ribbon_4  1 MkitCpsCkakyei 14
                   M   C++C +++++
     EPX71236.1 41 MTLICKKCRKAFRV 54
                   88899999999997 PP

  == domain 3  score: 5.2 bits;  conditional E-value: 0.014
  zinc_ribbon_4  5 CpsCkakyeid 15
                   Cp+C   y ++
     EPX71236.1 67 CPNCDNHYVVN 77
                   99999999886 PP

>> Zn-ribbon_8  Zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   1.7       1.6   2.4e+03      28      35 ..      22      29 ..       1      33 [. 0.60
   2 ?   12.0   1.2   0.00012      0.17       8      33 ..      45      71 ..      37      76 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 1.6
  Zn-ribbon_8 28 aCPeCgse 35
                 +C +C+ e
   EPX71236.1 22 DCIQCHDE 29
                 37777655 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 0.00012
  Zn-ribbon_8  8 CeeCghefevlqsis.dapltaCPeCg 33
                 C++C + f v      d++++ CP+C 
   EPX71236.1 45 CKKCRKAFRVHFGEEmDDSDEFCPNCD 71
                 *********7776666777777****6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       731  (0.0407719); expected 358.6 (0.02)
Passed bias filter:                      369  (0.0205812); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.42u 0.30s 00:00:00.72 Elapsed: 00:00:00.45
# Mc/sec: 769.25
//
Query:       EPX71237.1  [L=283]
Description: autophagy associated protein Atg3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.5e-32  112.4   0.1    2.1e-32  111.9   0.1    1.2  1  Autophagy_N      Autophagocytosis associated protein (Atg3), 
    2.1e-16   60.2   0.1    4.5e-16   59.2   0.1    1.6  1  Autophagy_act_C  Autophagocytosis associated protein, active-
    1.3e-11   43.7   4.7    3.7e-11   42.3   4.7    1.8  1  Autophagy_C      Autophagocytosis associated protein C-termin


Domain annotation for each model (and alignments):
>> Autophagy_N  Autophagocytosis associated protein (Atg3), N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.9   0.1   3.5e-36   2.1e-32       2     122 ..       6     134 ..       5     155 .. 0.68

  Alignments for each domain:
  == domain 1  score: 111.9 bits;  conditional E-value: 3.5e-36
                  ..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.................. CS
  Autophagy_N   2 kstlssvreyltpvlkeSkFretGvitpeeFvaAGDyLvhkfptWsWasaeeskrksyLPkdKqfLvtrnVpcykRakql...........eeekeee 88 
                   s+++++re++t  +k+S+F++tG+i+peeFv AGDyLv+kfptWsW+ +  ++ + +LPkdKq+Lvtr+V +  R  ++           e     +
   EPX71237.1   6 TSAFLNWREHITAASKSSNFETTGMISPEEFVLAGDYLVTKFPTWSWECG--DRIRGFLPKDKQYLVTRHVLSVPREINVdvngdwvdvetE-----D 96 
                  6899********************************************77..7899********************9999777776543220.....1 PP

                  ........XXX---B----XX........XXXXXXXXXXXX CS
  Autophagy_N  89 eeiie...dedegwvkthkeekeee....eeevkdideeek 122
                  ++  +    +d+  v++ ++e+  +    +e+  d  +++k
   EPX71237.1  97 SK-FKpsgMDDNSSVSSIHSEQ--SgsllQETSYDAPKNSK 134
                  22.1134455566666553332..22344222222222222 PP

>> Autophagy_act_C  Autophagocytosis associated protein, active-site domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.2   0.1   7.5e-20   4.5e-16       1      55 []     174     236 ..     174     236 .. 0.92

  Alignments for each domain:
  == domain 1  score: 59.2 bits;  conditional E-value: 7.5e-20
  Autophagy_act_C   1 ItYsktYqvPvlyfrlydedgtplsleelyed....sad..vtieehpl..lgvpwysiHPCk 55 
                      I+Y+k+Y++P+l++r+++  g+ ls++++y+d    +a   vt+e++p+  ++ +++s+HPCk
       EPX71237.1 174 IVYDKYYRTPRLFLRGWNAGGQLLSMKDIYADvsgeHAGktVTMEPFPHyhSHNTMASVHPCK 236
                      9*********************************9944456****99997799*********7 PP

>> Autophagy_C  Autophagocytosis associated protein C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.3   4.7   6.1e-15   3.7e-11       1      25 []     257     281 ..     257     281 .. 0.99

  Alignments for each domain:
  == domain 1  score: 42.3 bits;  conditional E-value: 6.1e-15
  Autophagy_C   1 VdqYLviFLKFisSViPTIEyDyTm 25 
                  VdqY+v+FLKF+s+++P+ E+DyTm
   EPX71237.1 257 VDQYMVLFLKFVSTMLPYFEIDYTM 281
                  9***********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (283 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       411  (0.0229238); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 2173.32
//
Query:       EPX71238.1  [L=174]
Description: DNA-directed RNA polymerase I complex subunit Rpa43 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.7e-19   69.6   0.2    5.8e-16   59.2   0.0    2.1  2  RPA43_OB     RPA43 OB domain in RNA Pol I
    1.1e-10   41.7   0.0    2.1e-10   40.8   0.0    1.5  2  SHS2_Rpb7-N  SHS2 domain found in N terminus of Rpb7p/Rpc25p/
  ------ inclusion threshold ------
      0.052   13.9   0.0      0.087   13.2   0.0    1.4  1  S1           S1 RNA binding domain


Domain annotation for each model (and alignments):
>> RPA43_OB  RPA43 OB domain in RNA Pol I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.2   0.0   9.8e-20   5.8e-16       1      49 [.      83     131 ..      83     134 .. 0.91
   2 !   11.0   0.0   8.3e-05       0.5      80     123 ..     130     170 ..     126     171 .. 0.82

  Alignments for each domain:
  == domain 1  score: 59.2 bits;  conditional E-value: 9.8e-20
                 --TTEEEEEEEEEEESSEEEEEETTTEEEEEECTTS-TTSEEE...CSS CS
    RPA43_OB   1 PqrgqkLeGwvnlqseghiglvvlnlFnvsIerkrlpadWkwvpaekkk 49 
                 P++g++LeG++nl s++higl+vl  Fn+sI+rk +p++W+++++++++
  EPX71238.1  83 PKKGDHLEGKINLVSPSHIGLLVLGIFNASIPRKSIPSSWSFIEPDTTE 131
                 99*****************************************666333 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 8.3e-05
                 -EEEEEEE-T.TSSB-..-SEEEEEEEEEE-....SSSS-EEEEES CS
    RPA43_OB  80 eeetGywvdsvsgekv..egklkFrvvdvdvgserdkgflsieGtl 123
                 +ee+G+w ++ ++++v  +++l+F+v +++     + g+  ++Gtl
  EPX71238.1 130 TEEQGRWKTK-EKKTVepGQSLEFQVDGLQR----EAGLTMVQGTL 170
                 589****666.9999974555*******999....99999999998 PP

>> SHS2_Rpb7-N  SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.8   0.0   3.5e-14   2.1e-10       2      70 .]      13      81 ..      12      81 .. 0.96
   2 ?   -3.5   0.0       2.4   1.5e+04      31      39 ..      96     105 ..      88     106 .. 0.58

  Alignments for each domain:
  == domain 1  score: 40.8 bits;  conditional E-value: 3.5e-14
                 EEEEE-GGGTTSTHHHHHHHHHHHHHTTBEETTT.EEEEEEEEEEEECC.EEE-TTTSSEEEEEEEEEEEE CS
  SHS2_Rpb7-N  2 dtvrlePsylgstledallerllekyegkvvpsl.Gvivavldiaeyse.gkvlggsGsvyvrVtfralvF 70
                 ++++++P +   ++++a+ +++l+ ++    p + G+++a++++  +++ gk++ +s+++y ++++++lvF
   EPX71238.1 13 LYLSIAPAHSR-NPLAAI-HEHLDSMILSKMPRInGILLAYDNVRFLENsGKIMYDSPFSYCWIRVDVLVF 81
                 689********.******.*************************888887********************9 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 2.4
                  EETTT.EEEE CS
  SHS2_Rpb7-N  31 vvpsl.Gviv 39 
                  v+ps  G++v
   EPX71238.1  96 VSPSHiGLLV 105
                  6667667766 PP

>> S1  S1 RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.5e-05     0.087       2      68 ..      83     162 ..      82     165 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.5e-05
                 STTTCEEEEEEEEEETTEEEEEETTTEEEEEEGGGSSSS.............CEESCHHHCEETTEEEEEEEEEEETTTT CS
          S1   2 pekgevveGeVtsvtkgGafVelgngvegfvpaselsrd.............arvedpdevlkvGdevkvkvlkvdkdrr 68 
                 p+kg+ +eG++  v++ ++   +++   + +p++++++                + ++++++ +G+ ++++v+++ ++++
  EPX71238.1  83 PKKGDHLEGKINLVSPSHIGLLVLGIFNASIPRKSIPSSwsfiepdtteeqgRWKTKEKKTVEPGQSLEFQVDGLQREAG 162
                 89**************666555554679************************88899*****************999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       304  (0.0169558); expected 358.6 (0.02)
Passed bias filter:                      298  (0.0166211); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1337.58
//
Query:       EPX71239.1  [L=148]
Description: mago-nashi [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.7e-72  239.9   0.6    9.7e-72  239.7   0.6    1.0  1  Mago_nashi  Mago nashi protein


Domain annotation for each model (and alignments):
>> Mago_nashi  Mago nashi protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  239.7   0.6   5.4e-76   9.7e-72       1     142 []       5     146 ..       5     146 .. 1.00

  Alignments for each domain:
  == domain 1  score: 239.7 bits;  conditional E-value: 5.4e-76
  Mago_nashi   1 fylryyvghkgkfGheflefefksdgklryannsnYkndslirkevlvskavlkelkriieeseilkeddakwpkkdkvgkqeleiklgkehisfetak 99 
                 fy+ryy+gh g+fGheflef+++sdg  ryannsnY+ndslirke++vs++vlke++ i+eesei+ke+d++wp+k+k+gkqelei+++ ehi+fet+k
  EPX71239.1   5 FYVRYYSGHYGRFGHEFLEFDYHSDGLARYANNSNYRNDSLIRKEMYVSPLVLKEVQAIVEESEIIKESDEQWPRKNKDGKQELEIRMNGEHIMFETSK 103
                 9************************************************************************************************** PP

  Mago_nashi 100 igslvdvqesedpeGlrvfyylvqDlkalvfslislhfkikPi 142
                 +gsl+dvq+sedpeGlrvfyyl+qDlkal+fslisl+fk++P+
  EPX71239.1 104 LGSLADVQNSEDPEGLRVFYYLIQDLKALCFSLISLNFKLRPV 146
                 ******************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       485  (0.0270511); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 1115.01
//
Query:       EPX71240.1  [L=476]
Description: RBZ zinc finger protein Vps36 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.7e-30  104.6   2.9    6.8e-30  104.1   2.9    1.2  1  EAP30           EAP30/Vps36 family
    3.4e-23   81.7   0.1      6e-23   80.8   0.1    1.4  1  Vps36_ESCRT-II  Vacuolar protein sorting protein 36 Vps36
    0.00025   20.4   1.9    0.00025   20.4   1.9    3.2  2  Vps36-NZF-N     Vacuolar protein sorting 36 NZF-N zinc-finger
    0.00041   19.6   0.3    0.00041   19.6   0.3    2.6  2  zf-RanBP        Zn-finger in Ran binding protein and others
      0.002   18.1   4.7     0.0026   17.8   0.3    2.4  2  DZR             Double zinc ribbon
  ------ inclusion threshold ------
      0.015   15.6   0.0      0.069   13.5   0.0    2.1  2  PH_TFIIH        TFIIH p62 subunit, N-terminal domain
      0.018   15.1   5.4        1.2    9.3   0.6    2.7  2  zf-Sec23_Sec24  Sec23/Sec24 zinc finger
      0.022   15.0   0.6      0.022   15.0   0.6    2.1  3  TFIID_NTD2      WD40 associated region in TFIID subunit, NTD2
      0.082   13.2   0.0       0.27   11.6   0.0    1.8  1  Interfer-bind   Interferon-alpha/beta receptor, fibronectin t
       0.15   12.4   1.0         19    5.6   0.2    2.4  2  DUF948          Bacterial protein of unknown function (DUF948
        1.3    8.8   5.4        2.1    8.1   1.2    2.5  2  zinc_ribbon_2   zinc-ribbon domain
          2    8.5   5.7        1.1    9.4   0.2    2.4  2  Rubredoxin      Rubredoxin


Domain annotation for each model (and alignments):
>> EAP30  EAP30/Vps36 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.1   2.9   4.5e-33   6.8e-30       2     235 ..     225     442 ..     224     443 .. 0.85

  Alignments for each domain:
  == domain 1  score: 104.1 bits;  conditional E-value: 4.5e-33
       EAP30   2 Giagl.qrreqtaaeyqdlgaellaealqdleallakfkesLvklaekhkakiksdpafraqftk......mcaslGvdplssk.....kseslgflel 88 
                 Gi  l q+++ + a++     ++l +a+qdl+a  +  +e    la+++ ++i++ +++ +q+++        ++lG+  l ++     +       + 
  EPX71240.1 225 GIRDLqQSHALKLAQN----GQTLVRAFQDLDAFFSLTQE-TMDLADQFVERIQNLAGVAKQSDQvqqllkRTHQLGL--LRNNyanmvS-------DN 309
                 9****9**********....9999****************.99*******************9999*9999889***9..5444333331.......33 PP

       EAP30  89 lglgdfyyeLavqivevclatraengglisleelyalvnrarggvalvspdDllraiekllvlg.........sglsvlqvggkkvvrSvptelntdqv 178
                  +   f  eL+++i+e++l+  +     i+++  +a++nrar  + lvsp+D+ +a+e++++l          sg s++q            +l +++ 
  EPX71240.1 310 SNAHLFQVELCKSISELLLNHLKSDTDTITMTHAWAMYNRAR-RTHLVSPADFAKACELFSTLDlgisvsklsSGASIFQ-----------LKLPNQKE 396
                 34556****************99999****************.789**************66664477777777777777...........55544442 PP

       EAP30 179 evlevakrlvsllaekssgggvtaselaeeeenlgwsvarakeaLeelereGllwvD 235
                    ++++ l   l+  ++   vt s++a +   l+ws+++++e+Le +e+eG++++D
  EPX71240.1 397 ---KFLSTL---LQTMQP--SVTISQCAMK---LHWSIGVTMEQLESAESEGYIVRD 442
                 ...555555...344455..5******999...***********************9 PP

>> Vps36_ESCRT-II  Vacuolar protein sorting protein 36 Vps36
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.8   0.1     4e-26     6e-23       2      91 ..       7      93 ..       6      94 .. 0.98

  Alignments for each domain:
  == domain 1  score: 80.8 bits;  conditional E-value: 4e-26
  Vps36_ESCRT-II  2 vttsgrpvLeenEsiilvqdnVglYegdeKilnrqnGrlyLTthriiyvdsadpkkeslslelklvesvsekelssgflrsspkiilklk 91
                    +t+s+ pvLe nE+i++ q+ VglY ++eK l++ nG+ly+++++++yvds++ kk+sl++ l+++ ++   +++s+++rsspki l+lk
      EPX71240.1  7 TTNSNLPVLEANEEIVHAQNCVGLYFDEEKSLDYGNGTLYISQKHVFYVDSENAKKNSLKIRLSDIVEL---NHTSRYFRSSPKIHLYLK 93
                    6899*****************************************************************...***************997 PP

>> Vps36-NZF-N  Vacuolar protein sorting 36 NZF-N zinc-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   1.9   1.6e-07   0.00025       6      51 ..      95     131 ..      93     143 .. 0.80
   2 ?    1.5   2.6      0.13     2e+02      11      25 ..     144     158 ..     137     181 .. 0.73

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 1.6e-07
  Vps36-NZF-N   6 vtatWvCpICsfsNevpsnfdpnastplPpClaCGvkpdlelikks 51 
                  v+ +W C IC ++N+ ++ +d        pC +CGv+  + l++  
   EPX71240.1  95 VQEKWACKICFYNNTGST-LD--------PCMNCGVEGRFRLLQAD 131
                  6789******99886655.88........5*******999988765 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.13
  Vps36-NZF-N  11 vCpICsfsNevpsnf 25 
                  +Cp C+f+N  +  f
   EPX71240.1 144 ICPTCTFQNYPDLLF 158
                  799999988655444 PP

>> zf-RanBP  Zn-finger in Ran binding protein and others
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   3.7      0.49   7.3e+02       4      15 ..      98     109 ..      96     120 .. 0.80
   2 !   19.6   0.3   2.8e-07   0.00041       6      26 ..     144     164 ..     144     165 .. 0.95

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.49
                 SEE-SSS--EEE CS
    zf-RanBP   4 dWdCskClvqNf 15 
                 +W C+ C ++N 
  EPX71240.1  98 KWACKICFYNNT 109
                 7******99996 PP

  == domain 2  score: 19.6 bits;  conditional E-value: 2.8e-07
                 E-SSS--EEESSSSB-TTT-- CS
    zf-RanBP   6 dCskClvqNfawstkCvaCqa 26 
                 +C++C++qN++  + C++C++
  EPX71240.1 144 ICPTCTFQNYPDLLFCEICGT 164
                 5******************97 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.5      0.22   3.3e+02      26      35 ..     111     120 ..      92     125 .. 0.61
   2 !   17.8   0.3   1.7e-06    0.0026       1      24 [.     145     168 ..     145     188 .. 0.91

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.22
         DZR  26 aaedrCpsCg 35 
                 ++ d C++Cg
  EPX71240.1 111 STLDPCMNCG 120
                 2357788887 PP

  == domain 2  score: 17.8 bits;  conditional E-value: 1.7e-06
         DZR   1 CpqCgeelppdarfCseCgtklka 24 
                 Cp+C  ++ pd  fC+ Cgt+l  
  EPX71240.1 145 CPTCTFQNYPDLLFCEICGTQLTH 168
                 *********************985 PP

>> PH_TFIIH  TFIIH p62 subunit, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   4.6e-05     0.069       6      52 ..      42      91 ..      39     110 .. 0.83
   2 ?   -2.8   0.0       5.4   8.1e+03      34      44 ..     224     234 ..     218     272 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 4.6e-05
    PH_TFIIH  6 dGtLtltekrleWtpdasssapsvsiplseIknlqispa...gsaKvmLk 52
                +GtL++++k++ + ++++++++s++i ls+I +l  +     +s+K+ L 
  EPX71240.1 42 NGTLYISQKHVFYVDSENAKKNSLKIRLSDIVELNHTSRyfrSSPKIHLY 91
                6**************8887889***********99997522257777665 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 5.4
    PH_TFIIH  34 seIknlqispa 44 
                   I++lq+s a
  EPX71240.1 224 GGIRDLQQSHA 234
                 55666777654 PP

>> zf-Sec23_Sec24  Sec23/Sec24 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.4    0.0035       5.2      17      33 ..      94     108 ..      88     110 .. 0.77
   2 ?    9.3   0.6   0.00078       1.2      11      36 ..     144     170 ..     142     172 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0035
  zf-Sec23_Sec24  17 idfggkrwiCnfCnhkn 33 
                     +   + +w C +C+  n
      EPX71240.1  94 F--VQEKWACKICFYNN 108
                     4..4469*******998 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00078
  zf-Sec23_Sec24  11 lNpfckidfggkrwiCnfCnhk.nevp 36 
                     ++p c++++   +  C++C++  +++p
      EPX71240.1 144 ICPTCTFQNYPDLLFCEICGTQlTHLP 170
                     89*****************99766666 PP

>> TFIID_NTD2  WD40 associated region in TFIID subunit, NTD2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       6.3   9.4e+03      38      48 ..      88      98 ..      88     104 .. 0.83
   2 ?   -3.3   0.1       6.5   9.7e+03      55      81 ..     186     212 ..     181     222 .. 0.54
   3 ?   15.0   0.6   1.5e-05     0.022      47     121 ..     259     338 ..     251     345 .. 0.78

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 6.3
                HHHHHHHHHTT CS
  TFIID_NTD2 38 vhlyLelvakg 48
                +hlyL++v+++
  EPX71240.1 88 IHLYLKFVQEK 98
                79999999876 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 6.5
                 HHHHHHGGGGGGGHH.HHHHHTT--SH CS
  TFIID_NTD2  55 kFfekfkedhealhkedlkkLasissp 81 
                 +Ffe ++e+ +++ k++ ++L+  +  
  EPX71240.1 186 RFFEILNEQRQETIKKKNNALQDTNRL 212
                 566666665555555544444444433 PP

  == domain 3  score: 15.0 bits;  conditional E-value: 1.5e-05
                 TT-HHHHHHHHHHHGG.GGGGGHH.HHHHHTT--SHHHHHHSHHHHHH....HHS-EEEEEEHHHHHHHHHHHHHTT-HH CS
  TFIID_NTD2  47 kgaeeeakkFfekfke.dhealhkedlkkLasisspehleenelakaf....renkyriklskaafelLlrfLeekekav 121
                 +++++ a++F+e++++    a++++++++L + +++  l +n++a+      + + ++++l+k+  elLl++L+++ +++
  EPX71240.1 259 QETMDLADQFVERIQNlAGVAKQSDQVQQLLKRTHQLGLLRNNYANMVsdnsNAHLFQVELCKSISELLLNHLKSDTDTI 338
                 4568889*********6667888889999998888888888888865511115667******************998874 PP

>> Interfer-bind  Interferon-alpha/beta receptor, fibronectin type III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00018      0.27       5      53 ..     407     458 ..     404     470 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00018
                    SSEEEEEEESSEEEEEEEESCEC...TSSTSCEHHHHSTT-EEEEEEEETTT CS
  Interfer-bind   5 pPevelevedkklnvtvkdpetp...kegknlslrelyqslsYkvsywknss 53 
                    +P+v+++++  kl+ ++   + +    e++  ++r++++++ + ++ywkn+ 
     EPX71240.1 407 QPSVTISQCAMKLHWSIGVTMEQlesAESEGYIVRDIHEDIGFGIQYWKNQF 458
                    79******9999997777776656689999*******************985 PP

>> DUF948  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0      0.02        31      35      70 ..     188     223 ..     182     231 .. 0.87
   2 ?    5.6   0.2     0.013        19      41      81 ..     257     296 ..     233     301 .. 0.71

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.02
      DUF948  35 ieelekqvdpilkevedllakvnelledvneklekv 70 
                  e l++q ++++k+ +++l+ +n+l + +nek+ ++
  EPX71240.1 188 FEILNEQRQETIKKKNNALQDTNRLKKIINEKSLRI 223
                 56789999**********************998776 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.013
      DUF948  41 qvdpilkevedllakvnelledvneklekvdplteavadlg 81 
                  ++++++ +++ ++ +++ l++v +++++v++l +  ++lg
  EPX71240.1 257 LTQETMDLADQFVERIQN-LAGVAKQSDQVQQLLKRTHQLG 296
                 456677777777777777.8888888888888887777765 PP

>> zinc_ribbon_2  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.2      0.13   1.9e+02      16      20 ..     116     120 ..     109     123 .. 0.75
   2 ?    8.1   1.2    0.0014       2.1       2      23 .]     145     166 ..     144     166 .. 0.92

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.13
  zinc_ribbon_2  16 CpyCG 20 
                    C +CG
     EPX71240.1 116 CMNCG 120
                    66666 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.0014
  zinc_ribbon_2   2 CpnCGaelqdnakFCpyCGtpl 23 
                    Cp C  ++ ++  FC+ CGt l
     EPX71240.1 145 CPTCTFQNYPDLLFCEICGTQL 166
                    999999999999*******986 PP

>> Rubredoxin  Rubredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   1.1      0.34   5.1e+02       1       9 [.      98     106 ..      98     122 .. 0.87
   2 ?    9.4   0.2   0.00073       1.1      15      43 ..     137     165 ..     134     168 .. 0.92

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.34
                 EEEETTT-B CS
  Rubredoxin   1 kyeCkvCgy 9  
                 k+ Ck+C y
  EPX71240.1  98 KWACKICFY 106
                 799****88 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00073
                 TBBGGGTB-TT--GGGS-TT-BBTTTB-B CS
  Rubredoxin  15 kGdpdegiapgTkFedlPddWvCPdCgve 43 
                 +G+ ++gi p   F++ Pd   C  Cg +
  EPX71240.1 137 EGNRKKGICPTCTFQNYPDLLFCEICGTQ 165
                 799***********************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (476 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1156  (0.0644765); expected 358.6 (0.02)
Passed bias filter:                      594  (0.0331307); expected 358.6 (0.02)
Passed Vit filter:                        67  (0.00373696); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.38
# Mc/sec: 3708.10
//
Query:       EPX71241.1  [L=214]
Description: SNARE Vti1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.1e-16   59.0   4.3    4.1e-16   59.0   4.3    2.2  2  V-SNARE_C  Snare region anchored in the vesicle membrane C-te
    1.5e-13   50.9   0.7    2.8e-13   50.0   0.0    1.8  2  V-SNARE    Vesicle transport v-SNARE protein N-terminus
  ------ inclusion threshold ------
      0.062   13.5   2.5      0.092   13.0   0.1    2.4  3  YqjK       YqjK-like protein
      0.095   12.5   1.2        1.7    8.3   0.5    2.1  2  dCache_1   Cache domain
       0.47   11.0   3.9       0.21   12.1   0.5    2.2  3  UPF0449    Uncharacterised protein family UPF0449


Domain annotation for each model (and alignments):
>> V-SNARE_C  Snare region anchored in the vesicle membrane C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.81   2.9e+03      10      25 ..      19      34 ..      14      47 .. 0.66
   2 !   59.0   4.3   1.2e-19   4.1e-16       2      65 ..     123     186 ..     112     187 .. 0.98

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.81
   V-SNARE_C 10 lknShrivdetisiGa 25
                l++  r +d t s++ 
  EPX71241.1 19 LNDLARTADNTASQAC 34
                4455566666666654 PP

  == domain 2  score: 59.0 bits;  conditional E-value: 1.2e-19
   V-SNARE_C   2 rllresdrlknShrivdetisiGaailedLhsQretLkrarsklhnvanrlgksnsiLrsikrR 65 
                 rl+ +s+rl +S+r+++et++ Ga il+dLh Qr++L+++   l +++ +l++s ++L+++ rR
  EPX71241.1 123 RLEEASQRLLESQRVANETEGVGANILRDLHGQRNQLEHSLGVLGETSGHLDRSLRTLKTMARR 186
                 78999**********************************************************9 PP

>> V-SNARE  Vesicle transport v-SNARE protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.0   0.0   7.7e-17   2.8e-13       1      78 [.       8      82 ..       8      83 .. 0.94
   2 ?   -2.4   0.1       1.8   6.4e+03      16      27 ..     122     131 ..     108     142 .. 0.50

  Alignments for each domain:
  == domain 1  score: 50.0 bits;  conditional E-value: 7.7e-17
     V-SNARE  1 fkellaeiksklarlsslageerkaalreiekkldeaeelldqMelEvrnlpsserasykaklreykselkklkkelk 78
                ++ l a+i++kl++l+       + a + +++ l+e++e++ q e+E+ ++p++er ++++++r+y+++l+++++ +k
  EPX71241.1  8 YRLLAADIEEKLNDLART---ADNTASQACQRLLNEIDEVIGQIEIEAGSVPTAERGALNGRIRSYRAKLEEWRNIFK 82
                67899***********88...7799***********************************************998665 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.8
     V-SNARE  16 sslageerkaal 27 
                 s l  ee ++ l
  EPX71241.1 122 SRL--EEASQRL 131
                 222..4444444 PP

>> YqjK  YqjK-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       2.6   9.5e+03       4      17 ..      66      79 ..      63      90 .. 0.60
   2 ?   -0.9   0.2      0.56     2e+03       8      25 ..     113     130 ..     108     134 .. 0.85
   3 ?   13.0   0.1   2.6e-05     0.092       6      52 ..     153     203 ..     148     204 .. 0.76

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 2.6
        YqjK  4 qieqQRldLaqaae 17
                +i++ R++L++  +
  EPX71241.1 66 RIRSYRAKLEEWRN 79
                66666777665444 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.56
        YqjK   8 QRldLaqaaepwekalap 25 
                 QR+ L +  +++e+a ++
  EPX71241.1 113 QRTRLLHGNSRLEEASQR 130
                 999999999999998876 PP

  == domain 3  score: 13.0 bits;  conditional E-value: 2.6e-05
        YqjK   6 eqQRldLaqaaepwekalapvDrgwqtlrslrkhli....lvsgllallgv 52 
                 + QR +L++ +  + ++   +Dr+++tl+ + + l+    + +g++a+l++
  EPX71241.1 153 HGQRNQLEHSLGVLGETSGHLDRSLRTLKTMARRLAmnrfFTTGIIAILVI 203
                 67***************************7766654111156666666665 PP

>> dCache_1  Cache domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.5   0.00048       1.7       6     101 ..       3     108 ..       2     129 .. 0.73
   2 ?    2.8   0.0     0.024        86       7      40 ..     158     191 ..     155     200 .. 0.87

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00048
    dCache_1   6 qaeeqllglaeqlanniedvldslenlaetlasnpslqdlleepnra...........neasreslqallksilksnpdisgv...ylvdadGqviass 90 
                 ++e++   la  + ++++d  ++++n+a +       q+ll+e++             + a r +l+++++s+ ++ +  +++    +++a+ + ++  
  EPX71241.1   3 TYEQEYRLLAADIEEKLNDLARTADNTASQA-----CQRLLNEIDEVigqieieagsvPTAERGALNGRIRSYRAKLEEWRNIfktEMANANRKALFGQ 96 
                 5667777777777777777777777766555.....999999999999**********9999***********99996555543337888888888755 PP

    dCache_1  91 dpssppnleg.t 101
                 ++ +   ++g  
  EPX71241.1  97 RDTTADEYKGvD 108
                 555444443333 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.024
    dCache_1   7 aeeqllglaeqlanniedvldslenlaetlasnp 40 
                   e++lg++++++ ++++ l++l++ a++la n 
  EPX71241.1 158 QLEHSLGVLGETSGHLDRSLRTLKTMARRLAMNR 191
                 678999************************9986 PP

>> UPF0449  Uncharacterised protein family UPF0449
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1       1.9   6.7e+03      84      84 ..      25      25 ..       4      47 .. 0.52
   2 ?   12.1   0.5   5.9e-05      0.21      47      84 ..      97     134 ..      78     150 .. 0.74
   3 ?   -2.0   0.0       1.4     5e+03      88      96 ..     166     174 ..     147     188 .. 0.49

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 1.9
     UPF0449 84 k 84
                 
  EPX71241.1 25 T 25
                1 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 5.9e-05
     UPF0449  47 sseeedleaeveelYeqvrtylelnerLeeakeeLkqk 84 
                    + d  + v++ Y q +++l+ n rLeea+++L + 
  EPX71241.1  97 RDTTADEYKGVDQDYDQRTRLLHGNSRLEEASQRLLES 134
                 2334444555***********************99765 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 1.4
     UPF0449  88 LktageeLe 96 
                 L   + +L+
  EPX71241.1 166 LGETSGHLD 174
                 333333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1076  (0.0600145); expected 358.6 (0.02)
Passed bias filter:                      694  (0.0387082); expected 358.6 (0.02)
Passed Vit filter:                        76  (0.00423894); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 1519.69
//
Query:       EPX71242.1  [L=72]
Description: DASH complex subunit Dad4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.8e-31  107.3   9.4    3.1e-31  107.2   9.4    1.0  1  DASH_Dad4  DASH complex subunit Dad4
     0.0018   18.4   2.8     0.0025   18.0   2.8    1.2  1  DASH_Dad1  DASH complex subunit Dad1
  ------ inclusion threshold ------
      0.013   15.7   0.7      0.014   15.6   0.7    1.0  1  GCN5L1     GCN5-like protein 1 (GCN5L1)
       0.12   13.4   0.0       0.14   13.2   0.0    1.2  1  DUF3774    Wound-induced protein


Domain annotation for each model (and alignments):
>> DASH_Dad4  DASH complex subunit Dad4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.2   9.4   6.9e-35   3.1e-31       1      71 []       1      71 [.       1      71 [. 0.99

  Alignments for each domain:
  == domain 1  score: 107.2 bits;  conditional E-value: 6.9e-35
   DASH_Dad4  1 MeNPheeqqsalLsRIiknvekLnesvvelnkeleeinkkNknvelvsqlwenYqrnvqfnLeatgelkeP 71
                M+NP+eeqqsalL RI++nvekLne+v +ln +l++in++N+nvel+sq+w+nY+rn++f+Le+tg+lk+P
  EPX71242.1  1 MNNPMEEQQSALLGRIVNNVEKLNENVCKLNYALQNINMSNMNVELISQMWANYARNAKFHLEETGNLKNP 71
                *********************************************************************98 PP

>> DASH_Dad1  DASH complex subunit Dad1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   2.8   5.5e-07    0.0025       3      51 ..       6      54 ..       5      57 .. 0.95

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 5.5e-07
   DASH_Dad1  3 erqRdrliqeIaesmeevlnnlnaLNRsLEeviavgkeFesVaaLWssF 51
                e+q ++l+  I +++e++ +n+ +LN  L +++      e ++++W ++
  EPX71242.1  6 EEQQSALLGRIVNNVEKLNENVCKLNYALQNINMSNMNVELISQMWANY 54
                89********************************************987 PP

>> GCN5L1  GCN5-like protein 1 (GCN5L1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.6   0.7   3.1e-06     0.014      28      92 ..       6      70 ..       1      71 [. 0.94

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 3.1e-06
      GCN5L1 28 aaltealvdklnsgvaeayanqkklekeakalqanvakfakqtdqWlalvesfnsalkeiGDven 92
                ++ + al+  + ++v+++ +n  kl+  +++++ + ++++  ++ W++ +++ +  l e G+++n
  EPX71242.1  6 EEQQSALLGRIVNNVEKLNENVCKLNYALQNINMSNMNVELISQMWANYARNAKFHLEETGNLKN 70
                5667899999****************************************************988 PP

>> DUF3774  Wound-induced protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   3.2e-05      0.14       7      38 ..      19      48 ..      15      69 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 3.2e-05
     DUF3774  7 aVealkDqGlcRwnyaLrslhqaaksnlasls 38
                 Ve+l +  +c++nyaL+ ++ + ++   ++s
  EPX71242.1 19 NVEKLNEN-VCKLNYALQNINMSNMNVE-LIS 48
                68999999.***********99887755.333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       957  (0.0533772); expected 358.6 (0.02)
Passed bias filter:                      475  (0.0264934); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 553.52
//
Query:       EPX71243.1  [L=389]
Description: mRNA cleavage and polyadenylation specificity factor complex subunit Ctf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.7e-18   66.9   1.1    1.7e-18   66.9   1.1    2.3  3  CSTF2_hinge  Hinge domain of cleavage stimulation factor subu
    6.5e-18   64.3   0.0    1.1e-17   63.6   0.0    1.4  1  RRM_1        RNA recognition motif. (a.k.a. RRM, RBD, or RNP 
    3.9e-09   35.9   5.1      1e-08   34.6   5.1    1.7  1  CSTF_C       Transcription termination and cleavage factor C-
     0.0061   16.2   0.0      0.061   13.0   0.0    2.4  2  Spo7_2_N     Sporulation protein family 7
  ------ inclusion threshold ------
      0.018   15.1   0.1      0.075   13.2   0.0    2.0  2  RRM_7        RNA recognition motif
      0.083   12.7   0.2       0.19   11.6   0.2    1.5  1  DUF2448      Protein of unknown function C-terminus (DUF2448)
      0.092   12.3   0.0       0.18   11.4   0.0    1.4  1  RRM_5        RNA recognition motif. (a.k.a. RRM, RBD, or RNP 


Domain annotation for each model (and alignments):
>> CSTF2_hinge  Hinge domain of cleavage stimulation factor subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       2.7   6.8e+03      26      36 ..      34      44 ..      32      45 .. 0.79
   2 !   66.9   1.1   6.5e-22   1.7e-18       5      81 .]     234     310 ..     231     310 .. 0.96
   3 ?   -1.9   0.1       1.8   4.6e+03      21      34 ..     367     380 ..     353     381 .. 0.67

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 2.7
  CSTF2_hinge 26 ppeqllellsq 36
                 ++ q+ e+l+q
   EPX71243.1 34 SEHQMTEILEQ 44
                 56899999988 PP

  == domain 2  score: 66.9 bits;  conditional E-value: 6.5e-22
  CSTF2_hinge   5 gvqlppglsapdaIsktLsslppeqllellsqlKalaqqnpsqarelLkqnpqLayAllqalllmglvdpdvvtkvl 81 
                  g + p++ s+p +++k+ ss++ ++ll +l+ql ++++  p++ar+lL++np L yA++qa+llm+++d+ v+++v+
   EPX71243.1 234 GSETPQSYSVPPSVAKVFSSFTAQELLTMLTQLQTVVHVAPDEARRLLNANPALPYAAFQAMLLMNMIDSRVLQQVV 310
                  778888999*****************************************************************986 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 1.8
  CSTF2_hinge  21 tLsslppeqllell 34 
                  +++slpp+q  +++
   EPX71243.1 367 QIQSLPPAQREQII 380
                  56677777766655 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.6   0.0   4.4e-21   1.1e-17       1      66 [.      24      90 ..      24      95 .. 0.96

  Alignments for each domain:
  == domain 1  score: 63.6 bits;  conditional E-value: 4.4e-21
                EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETT CS
       RRM_1  1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklgg 66
                +fVgn+p+dv+e+++ e+++++Gp+k +klv d etg+ kg++f+eF ++e  + A+++ln++++ g
  EPX71243.1 24 VFVGNIPYDVSEHQMTEILEQVGPVKQFKLVMDlETGNGKGYGFCEFYDSETTALAVQRLNNREFFG 90
                8*************************************************************88765 PP

>> CSTF_C  Transcription termination and cleavage factor C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.6   5.1   3.9e-12     1e-08       3      37 ..     351     385 ..     349     386 .. 0.92

  Alignments for each domain:
  == domain 1  score: 34.6 bits;  conditional E-value: 3.9e-12
      CSTF_C   3 qekaeLlqQVLqLseeqIaaLPpdqRrsImiLrqQ 37 
                 + + +L++Q + L++eqI++LPp qR++I+  r Q
  EPX71243.1 351 AKRMALINQLMTLTPEQIQSLPPAQREQIIAIRRQ 385
                 56789*************************99977 PP

>> Spo7_2_N  Sporulation protein family 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.0   2.4e-05     0.061      11      50 ..       6      45 ..       5      55 .. 0.87
   2 ?   -0.1   0.2      0.29   7.5e+02       7      15 ..     252     260 ..     251     265 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2.4e-05
    Spo7_2_N 11 afrLsyaspeelsltsrvvlLGgIPelWlqeqrksiyksl 50
                a rL ya+     +  +vv++G IP++  ++q  +i++++
  EPX71243.1  6 AIRLLYATTSMSMTVGNVVFVGNIPYDVSEHQMTEILEQV 45
                77*******999999*************999998888766 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.29
    Spo7_2_N   7 sSFTafrLs 15 
                 sSFTa+ L 
  EPX71243.1 252 SSFTAQELL 260
                 7*****985 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   2.9e-05     0.075       4      29 ..      24      49 ..      21      82 .. 0.91
   2 ?   -1.4   0.0         1   2.6e+03      27      41 ..      93     109 ..      76     120 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.9e-05
       RRM_7  4 vFvGGlPiDiteeelkatfkefgkvl 29
                vFvG +P D++e+++++ +++ g+v+
  EPX71243.1 24 VFVGNIPYDVSEHQMTEILEQVGPVK 49
                9********************99985 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1
       RRM_7  27 kvlvdwPkk..aeskkk 41 
                 k++v++P +   +++++
  EPX71243.1  93 KIRVEFPSNdpRRHQNY 109
                 57899**9874333333 PP

>> DUF2448  Protein of unknown function C-terminus (DUF2448)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.2   7.5e-05      0.19      39      98 ..     308     368 ..     289     375 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 7.5e-05
     DUF2448  39 alalygssdpfa.tqtlsggvvppalaggkesasnesaaenetakeaegwqellellPekv 98 
                  ++l   s+p + + t ++ ++p a++++++  s +++++ ++ak ++  ++l++l Pe++
  EPX71243.1 308 QVVLSMRSNPASqAPTPAPQAAPRATPAARPDISADADTNSTEAKRMALINQLMTLTPEQI 368
                 44454445554404566677888989999*****9************************97 PP

>> RRM_5  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   6.9e-05      0.18      21     101 ..      16     101 ..       4     121 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 6.9e-05
       RRM_5  21 agvaegsVllVyglepdkvnldklFnlfclYgnvervkflk.....tkketalvqmgdasaveravqHLnnaklfgk.rlevalSKq 101
                   ++ g V++V ++  d v  +++  ++ + g v++ k++      + k++ + +  d+    +avq Lnn + fg  +++v +  +
  EPX71243.1  16 MSMTVGNVVFVGNIPYD-VSEHQMTEILEQVGPVKQFKLVMdletgNGKGYGFCEFYDSETTALAVQRLNNREFFGPrKIRVEFPSN 101
                 35666789999999766.566777889999999*99998753333356899*************************87999987544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (389 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       675  (0.0376485); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 2868.77
//
Query:       EPX71244.1  [L=132]
Description: TRAPP complex subunit Trs23 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-50  170.6   0.1    1.9e-50  170.5   0.1    1.0  1  Sybindin  Sybindin-like family
    9.5e-08   32.2   0.4    1.2e-07   31.9   0.4    1.2  1  Sedlin_N  Sedlin, N-terminal conserved region


Domain annotation for each model (and alignments):
>> Sybindin  Sybindin-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  170.5   0.1   2.1e-54   1.9e-50       1     142 [.       1     131 [.       1     132 [] 0.96

  Alignments for each domain:
  == domain 1  score: 170.5 bits;  conditional E-value: 2.1e-54
    Sybindin   1 ifslyiinkaGgliyqkeaneekkearpklstneklllasmlhslkaiasklspvkakeelqgssgievletdtfkLhclqtltGiKfvlitdtktnae 99 
                 +++++iin+aG+li+++e   +     + l+ ne+l+la+++h+++ai++++sp      l+gssgi++le++tf++h+lqt+tG+Kfvl+td+k+ ++
  EPX71244.1   1 MHAILIINRAGSLIFHREYGPSP----TSLTPNEYLILAGTIHGVHAISTQISP------LPGSSGIQFLEATTFNIHILQTHTGVKFVLFTDKKQ-TN 88 
                 6899**************99554....579************************......************************************.99 PP

    Sybindin 100 adsllrkiyelYsdyvlknPfyslempircelFdeklkelles 142
                 ++  l+k+yelY+dyvlknPfy+lempi+c+lF+e+lk++++s
  EPX71244.1  89 VRPHLQKYYELYADYVLKNPFYTLEMPIKCQLFEEQLKRYIDS 131
                 9999************************************986 PP

>> Sedlin_N  Sedlin, N-terminal conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.9   0.4   1.4e-11   1.2e-07      66     129 ..      70     129 ..      57     131 .. 0.88

  Alignments for each domain:
  == domain 1  score: 31.9 bits;  conditional E-value: 1.4e-11
    Sedlin_N  66 yvtnskikflllhesssskkkdekikqffqevhelyvktlm.nPFykvneeirSpaFdkkvkkla 129
                   t +++kf+l ++     kk+++++  +q+ +ely ++++ nPFy  +++i+ + F++++k++ 
  EPX71244.1  70 LQTHTGVKFVLFTD-----KKQTNVRPHLQKYYELYADYVLkNPFYTLEMPIKCQLFEEQLKRYI 129
                 5699*********9.....999***************98654******************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       468  (0.026103); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.44
# Mc/sec: 907.04
//
Query:       EPX71245.1  [L=319]
Description: ribosomal protein subunit L3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.3e-07   30.0   0.0    1.8e-06   28.5   0.0    1.8  1  dsrm             Double-stranded RNA binding motif
    1.7e-06   28.2   0.0    1.5e-05   25.1   0.0    2.4  2  Ribonucleas_3_3  Ribonuclease-III-like
    0.00018   22.1   0.0     0.0011   19.6   0.0    2.2  2  Ribonuclease_3   Ribonuclease III domain
  ------ inclusion threshold ------
      0.044   14.0   0.0       0.12   12.7   0.0    1.8  1  DND1_DSRM        double strand RNA binding domain from DEAD E


Domain annotation for each model (and alignments):
>> dsrm  Double-stranded RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.5   0.0     4e-10   1.8e-06       1      64 [.     217     281 ..     217     284 .. 0.96

  Alignments for each domain:
  == domain 1  score: 28.5 bits;  conditional E-value: 4e-10
                 HHHHHHHHHHHTT.SEEEEEEEEEESSTSSSEEEEEEEEETTEEEEEEEESSHHHHHHHHHHHHH CS
        dsrm   1 pKskLqeycqkkg.kppnyeyvseegpphslpkFvvtvkvngklygsGvgsnKKeAeqsAAedal 64 
                 p+++L ++c++ + k+p+y++  e+g  + +p+F++ ++ + +  g+G +s+ ++Aeq+AA +a+
  EPX71245.1 217 PRRQLARLCRRLKlKDPVYRIDAETGRKTREPVFIIGAYSGPFCLGQGQASSMDLAEQQAAYNAV 281
                 7899************************************99********************996 PP

>> Ribonucleas_3_3  Ribonuclease-III-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.0   3.4e-09   1.5e-05       5     126 ..      65     203 ..      62     205 .. 0.75
   2 ?   -2.0   0.0      0.85   3.8e+03      56      80 ..     212     236 ..     207     252 .. 0.70

  Alignments for each domain:
  == domain 1  score: 25.1 bits;  conditional E-value: 3.4e-09
  Ribonucleas_3_3   5 leqaltHkSfangrkghNerLefLGdavLklsvseyl.lekaekdegeltklraslvseeslaeiAkelg.............Lgkvlrl.... 80 
                      l qal  k   ++   +Ne+L  +G+ + +++v+e +   +++ +e+  + lr+ l+++++l+++++ +g             +gkvl      
       EPX71245.1  65 LAQALIDKTAVKNAAVSNEKLWTIGKILSDMYVLERIkCLYPRLPEKGVQGLRDGLLDSRALNRLGNSWGlevqlwnedpkqaFGKVLAKttev 158
                      56667767666677789********99999998887647788999**99*********************666666666666644444432110 PP

  Ribonucleas_3_3  81 rkgeeetegsgrekvladaleAliGAiyldkgaevaqefveekilk 126
                      +  +   ++  +   +  a+ A++GA++l++g+++ ++fv ++i++
       EPX71245.1 159 ET-TRVAGEIYKPDAMKRAILAILGAVHLEGGFQESKKFVDSHIFS 203
                      11.22233333444888999**********************9987 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.85
  Ribonucleas_3_3  56 raslvseeslaeiAkelgLgkvlrl 80 
                      ++ l+ +++la++ ++l+L++ ++ 
       EPX71245.1 212 LQILYPRRQLARLCRRLKLKDPVYR 236
                      5567778899999999999886655 PP

>> Ribonuclease_3  Ribonuclease III domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   2.4e-07    0.0011       1     105 []      83     189 ..      83     189 .. 0.85
   2 ?   -0.8   0.0      0.54   2.4e+03      42      58 ..     219     235 ..     209     271 .. 0.79

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 2.4e-07
                     HHHHHHHHHHHHHHHHHHHHHHCTTSSHHHHHHHHHHHTSHHHHHHHHHCTTCHCCHCHH..............HHCCSTTCHC....TSHHHHH CS
  Ribonuclease_3   1 erLeflGDavlklaittylfetypdahegrlsklrsklvsnenlarlakklglpkflrasefdpprnwlppgyklsddekeddd....adkvlad 91 
                     e+L ++G+   ++++ +++ + yp + e+ ++ lr  l+ +++l rl++++gl+  l+  + dp++   + ++k+++ e  + +    ++  +  
      EPX71245.1  83 EKLWTIGKILSDMYVLERIKCLYPRLPEKGVQGLRDGLLDSRALNRLGNSWGLEVQLW--NEDPKQAFGKVLAKTTEVETTRVAgeiyKPDAMKR 175
                     78999***************************************************99..45666666666555555555544477888999999 PP

                     HHHHHHHHHHHHCT CS
  Ribonuclease_3  92 vvEAliGaiyldsg 105
                     ++ A++Ga++l++g
      EPX71245.1 176 AILAILGAVHLEGG 189
                     99*******99876 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.54
                     HHHHHHHHCTTCHCCHC CS
  Ribonuclease_3  42 enlarlakklglpkflr 58 
                     + larl+++l+l++ + 
      EPX71245.1 219 RQLARLCRRLKLKDPVY 235
                     67999999999987555 PP

>> DND1_DSRM  double strand RNA binding domain from DEAD END PROTEIN 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   2.7e-05      0.12       4      74 ..     218     279 ..     215     283 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 2.7e-05
   DND1_DSRM   4 vqlLeelCeknkwgsPvYelhseagpdgkllflYkVvipgietslkgvvvifmpdklastkeeAkelaAeq 74 
                 +  L  lC++ k+ +PvY++  e+g + +  +     i +++++      +  ++  as+++ A++ aA++
  EPX71245.1 218 RRQLARLCRRLKLKDPVYRIDAETGRKTREPVF---IIGAYSGP------FCLGQGQASSMDLAEQQAAYN 279
                 67899********************99776543...45555555......334455556667777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (319 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       381  (0.0212505); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 2251.59
//
Query:       EPX71246.1  [L=1075]
Description: Sre1 cleavage activating protein Scp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      2e-36  125.2   8.6    3.8e-36  124.2   8.6    1.5  1  Sterol-sensing  Sterol-sensing domain of SREBP cleavage-activ


Domain annotation for each model (and alignments):
>> Sterol-sensing  Sterol-sensing domain of SREBP cleavage-activation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.2   8.6   2.1e-40   3.8e-36       2     146 ..     255     400 ..     254     405 .. 0.96

  Alignments for each domain:
  == domain 1  score: 124.2 bits;  conditional E-value: 2.1e-40
                     HHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHCHHHHHHHHTTTCHHHHHHHHHHHHCCCCHHCCCHHHHHH CS
  Sterol-sensing   2 vkskfgLglagviivllsvasslgllaylgltltliilevlPflvlavgvdnifvlvkavqrtsrsldeseriaealgevgpsilltsltellal 96 
                     v++kfgL+ +++i+ +++++s++++l++++ t  ++++ ++++++++++++n+f+l++ v+++++++++++ri+e+++ +++  l +++t+l++l
      EPX71246.1 255 VRAKFGLTSTIFIQSGTAYLSACSILYFFERTGPICPWPIAYYIIIFMDIENSFRLLRVVIASPPTKRVPSRIMEGFTVTIVTSLTSLFTKLMTL 349
                     899******************************************************************************************** PP

                     HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHH.HCTXXT CS
  Sterol-sensing  97 llgaltdvpavqeFclfaavavlvdFllqitfFvavLsldirre.eserld 146
                     ++ +++++p vqeFclf a++++++F+l+++fF+avLs+dirr  +++ ld
      EPX71246.1 350 FILSFFVYPLVQEFCLFLACSFVISFMLHMSFFLAVLSVDIRRLeLQDFLD 400
                     *888***************************************96666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1075 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       905  (0.0504769); expected 358.6 (0.02)
Passed bias filter:                      501  (0.0279436); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.78u 0.30s 00:00:01.08 Elapsed: 00:00:00.45
# Mc/sec: 7143.86
//
Query:       EPX71247.1  [L=1140]
Description: nucleoporin Nup120 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.1e-68  229.8   5.6    8.2e-68  229.4   5.6    1.2  1  Nup160    Nucleoporin Nup120/160


Domain annotation for each model (and alignments):
>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  229.4   5.6   4.6e-72   8.2e-68      16     535 ..      39     554 ..      24     556 .. 0.88

  Alignments for each domain:
  == domain 1  score: 229.4 bits;  conditional E-value: 4.6e-72
                 ------HHHHHHHHHHHTTCEESSEEEEESSSSEEEEEE.EETTEEEEEE---S...SSS--EEEEEE-SS-SESSSESEEEEESSSEEEEEEEESSS- CS
      Nup160  16 kasrtaedEeafgarvaatagvvyfrksnsynrfilWrvltdgktLelvelslk...ssllnnnlrldFpssllpscvsftdsesgdvlivivtttsvh 111
                 + +++++   + + +++a ++++++rksn+ +r i+W+v   ++tL l+e+slk   s ++ +n+r++Fps++l+ c++f  ++++d ++++v+t++ +
  EPX71247.1  39 AEEQNFDCDFVLKGELIAFDSGIFTRKSNLFPRCIHWNV-FKNQTLVLSEVSLKkesSCIPSFNIRIHFPSQVLKNCITFGFDDEKDEVSLFVITSTRV 136
                 55555555555667889999******************6.999************9999**************************************** PP

                 EEEEEEEHHHHHSTT----S..TSBEEB-SSGT.TTS-EEEEEE-SSSEEEEEETTS-EEEEEEETTEEEEEEEEE-------B--TTTT.TSS--SS- CS
      Nup160 112 lyvlrlssdffrsskailndldewckidspsslstsskpgrlaavssnellvsladggllklkrdedggawkesvfepksfllslsgllglladpsrrk 210
                 ly+++l++++f ss+ ++++   wc  ++p+s+ +++ p+ +  v+++ l+v+++ ggl+kl + +++ ++ e+++ ++ + +s++ +l+ l+++++++
  EPX71247.1 137 LYSIQLKPEWFLSSNPTVDE--GWCTYYRPPSF-LTKSPSYATGVDRSSLFVTFDIGGLVKLNLTSNNNQIREEHYHDSRYMTSIRHYLT-LQAFKNDY 231
                 ************88888888..***********.999***9*************************************************.******** PP

                 --TT-ECEEEEET.....TTTEEEEEETT-EEEEEETTTTEEEEEEE--.-SSSTTS--SSEESEEESSSSEEEE..........E--GGG-EEEEEEE CS
      Nup160 211 sgasvalsldvavavveigqtylfalsrdgkLrvWnlltgkclatidllrdeeaqdessskstldpaesslirvsdggqsylvvtyspssggefkvwkv 309
                 + ++  +++ v++   +  + yl++ls+d++L++Wn l+g +l+ i+   + ++ ++  s++++d             qsy +v++  s++g f+++k 
  EPX71247.1 232 RPPN-SIVSMVYN---H-RYHYLLTLSLDHTLKIWNSLNGVLLENISFEPPSVQNSNALSYLSIDSF----------TQSYVSVYCPNSTHGYFSFYKF 315
                 ****.45555555...3.788**************************99444444444444444444..........555555669************9 PP

                 EEEE-....SSSEEEEES-S--.----S-TT.--EEEEEEEEE-T.....TEEEEEEEEEETTEEEEEEEEEE-SS-SS-.EEEEEE--------TTTT CS
      Nup160 310 kkedtsvs.lglvdlfleqtiv.padpdssn.vweLrDfaltsse.....kgfelwalwknnegsvlkvlkinfesdeadtdddWssvsaseritdket 400
                 + + +++  l+l+ l++  +i+ p  pd++   w+L    l          +f l ++wk+n+  v++ +++ ++ d++  +  W+s+   ++   +  
  EPX71247.1 316 DLDPDNGTfLKLSPLVT--NITpPRLPDDEYlPWTLLKTSLI--CldqhnLRFNLFLAWKSNLHAVIQCAEVVPDIDQTA-KVTWKST-KKNTFANFDK 408
                 99988888788888888..789999***9889****663332..13345899**************************99.******9.7777777777 PP

                 TS--SSGGG-SSH....HHHHHHHH--.-HHHHHHHHHHHTTSS--ST.....HHHTS-HHHHHHHHHHHHHTTS..-B-SSSSSB-HHHHHHHHHHHH CS
      Nup160 401 lgdeedveeatke....yldrilepGrFsnavletALsifrrnlssss.....svkslssaelkeevcsavesei..lndvseggadyeeyreaskreW 488
                 ++   ++++ +      ++d +l+    s ++l++A + +++++ ++s     s  s+s++el +e+++++   +  + ++    +dy  yr+a+++eW
  EPX71247.1 409 FSFDIPTTMSFGDvseiWIDNLLNKKYISPESLQLAFLCYQKVNPYTSkskmdSLLSTSISELMKEITTMIIGSVpvQPEFGSSSFDYPAYRQALYNEW 507
                 77777777776667799**************************99988999999999****************************************** PP

                 HHHHHHHHHTSSSSG-EEEEEEBTTTTBEEEEETTEEEEEE---HHH CS
      Nup160 489 erFyrlceeldkaaseplsLsldpqadvpwlirrdslslirpcselE 535
                 erF++l ++ld+ +se ls+ +d+ +  +++ ++++++++r+  ++E
  EPX71247.1 508 ERFAKLTLYLDSFGSEVLSIEVDSNSKNMYVCYANKIGVLREPVNIE 554
                 *****************************************988877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1140 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       472  (0.0263261); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.70u 0.29s 00:00:00.99 Elapsed: 00:00:00.45
# Mc/sec: 7535.59
//
Query:       EPX71248.1  [L=209]
Description: iron-sulfur protein I [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.7e-14   54.0   0.0    2.5e-14   53.4   0.0    1.3  1  Fe-S_biosyn  Iron-sulphur cluster biosynthesis


Domain annotation for each model (and alignments):
>> Fe-S_biosyn  Iron-sulphur cluster biosynthesis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.4   0.0   1.4e-18   2.5e-14       3     110 ..     103     203 ..     101     204 .. 0.97

  Alignments for each domain:
  == domain 1  score: 53.4 bits;  conditional E-value: 1.4e-18
                  EEE-HHHHHHHHHHHHCTTEC..EEEEEECCTSCCGGS.TT.EEEEEEEEESSTSTTTEEEEEETTEEEEEEGGGHHHS.TTEEEEEEEETTEEEEE. CS
  Fe-S_biosyn   3 itlteaAaeklkkllaedkke..lrLdvddgggpyskggCsiggkyslvlvdeedeeydevlesnggkvyvksyslvfldeglvldfvedlgtlgLk. 97 
                  ++++e+A+++l+k+ ++++++  lr+ vd gg       C+ g++ s+++ d+   ++d v+  ++ +++++s sl+++  g ++ ++++l +++++ 
   EPX71248.1 103 LHMSESAKQQLEKVANQKQQDtfLRVVVDGGG-------CH-GYQISFKMDDQL-GKEDSVFVRGKARIVTDSISLPLI-SGSEIVYTKELIGSSFQl 190
                  799**************99999*********9.......**.************.************************.9****************9 PP

                  EETCCEEEEEEEE CS
  Fe-S_biosyn  98 sdngilddnvglg 110
                   +n+ +++++g++
   EPX71248.1 191 VNNPRAKSSCGCN 203
                  9***********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1259  (0.0702214); expected 358.6 (0.02)
Passed bias filter:                      650  (0.0362541); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 1440.42
//
Query:       EPX71249.1  [L=121]
Description: V-type ATPase V1 subunit F [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.7e-29  100.9   0.4    4.3e-29  100.7   0.4    1.0  1  ATP-synt_F       ATP synthase (F/14-kDa) subunit
  ------ inclusion threshold ------
      0.057   13.8   0.0        1.4    9.4   0.0    2.1  2  Ins134_P3_kin_N  Inositol 1,3,4-trisphosphate 5/6-kinase pre-
       0.12   12.4   0.3       0.21   11.6   0.3    1.4  1  THP2             Tho complex subunit THP2
       0.13   12.0   0.0       0.14   11.8   0.0    1.2  1  RGS-like         Regulator of G protein signalling-like domai
       0.16   11.9   0.7        4.3    7.2   0.1    2.1  2  eIF-5_eIF-2B     Domain found in IF2B/IF5


Domain annotation for each model (and alignments):
>> ATP-synt_F  ATP synthase (F/14-kDa) subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.7   0.4   1.2e-32   4.3e-29       1      91 []      13     115 ..      13     115 .. 0.98

  Alignments for each domain:
  == domain 1  score: 100.7 bits;  conditional E-value: 1.2e-32
                 EEEEESHHHHHHHHHTTCEEEE............CSSHHHHHHHHHHHHH.HTTEEEEEEEHHHHCCCHHHHHHCTCSSSSEEEEESCSCCGGSHHCHH CS
  ATP-synt_F   1 iavIGdedtvtgfrlaGvgeve............vtdeeeieealkelle.redigiilitekiaeeirelideykeealPaileIPskegpydeekds 86 
                 i vIGd dtvtg++laG g+v+            +t++e+i+++++++++ r+di+i+li++  a++ir++i++y + a+Pa+leIPsk+ pyd+ekds
  EPX71249.1  13 ISVIGDDDTVTGLLLAGTGQVNedgkknffivnqKTTDEQIADVFDDYTTkRSDIAIVLINQVAANRIRDRIEKYVQ-AFPAVLEIPSKDDPYDPEKDS 110
                 78***********************************************88**************************.********************* PP

                 HHHHH CS
  ATP-synt_F  87 vrkkv 91 
                 ++++v
  EPX71249.1 111 ILRRV 115
                 **997 PP

>> Ins134_P3_kin_N  Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.0   0.00038       1.4      12      74 ..       5      70 ..       2      76 .. 0.76
   2 ?    3.6   0.0     0.025        91      47      72 ..      70      95 ..      65     101 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00038
                     HHHTHHHHHHHH.HHTT-EEEE--TTS-SGGG--..-SEEEE--HHHHHHHHHHHHHHH-TTSEEE CS
  Ins134_P3_kin_N 12 ksflqpklvela.rkrgielvkldesrpleEqGp..ldviiHkltdkewkerleefreahPevivl 74
                     ksf q +l++    + ++    l  +  ++E G+  + ++  k td+++ ++++++  +  ++ ++
       EPX71249.1  5 KSFEQRSLISVIgDDDTVTGLLLAGTGQVNEDGKknFFIVNQKTTDEQIADVFDDYTTKRSDIAIV 70
                     677777777764134556666777788899999744667789****************99988765 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.025
                     EEEE--HHHHHHHHHHHHHHH-TTSE CS
  Ins134_P3_kin_N 47 viiHkltdkewkerleefreahPevi 72
                     v+i +   + +++r+e++ +a P+v 
       EPX71249.1 70 VLINQVAANRIRDRIEKYVQAFPAVL 95
                     56777778899************985 PP

>> THP2  Tho complex subunit THP2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.3   5.8e-05      0.21      19      55 ..      34      69 ..      27      93 .. 0.69

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 5.8e-05
        THP2 19 eisdeevseivvddekppkelqeilekyeeesedaee 55
                + +d +++ ++v+++++ +++++++++y+++++d++ 
  EPX71249.1 34 N-EDGKKNFFIVNQKTTDEQIADVFDDYTTKRSDIAI 69
                3.5667778*********************6665542 PP

>> RGS-like  Regulator of G protein signalling-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0     4e-05      0.14      67     121 ..      11      65 ..       4     117 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 4e-05
                 -TT-----HHHHHHH...HHHHHTT---HHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    RGS-like  67 allrvpvpeslalelekrrkelikeeilrrviqevrerakedinkqledfrqKrs 121
                 +l+ v  +++ ++ l    +++ +e+ ++++++  ++   e+i   ++d+ +Krs
  EPX71249.1  11 SLISVIGDDDTVTGLLLAGTGQVNEDGKKNFFIVNQKTTDEQIADVFDDYTTKRS 65 
                 55666667777777777888999*******************************8 PP

>> eIF-5_eIF-2B  Domain found in IF2B/IF5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.1    0.0012       4.3      58      85 ..      34      62 ..      18      64 .. 0.76
   2 ?    3.6   0.1     0.017        59      65      87 ..      69      91 ..      61      94 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0012
                  EES.ETTEEEESSSSSCCHHHHHHHHHHH CS
  eIF-5_eIF-2B 58 sid.engrlilngkfeakkleklldkyie 85
                  + d +++ +i+n+k +++++ +++d+y +
    EPX71249.1 34 NEDgKKNFFIVNQKTTDEQIADVFDDYTT 62
                  334467779******************76 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.017
                  EEESSSSSCCHHHHHHHHHHHHH CS
  eIF-5_eIF-2B 65 lilngkfeakkleklldkyieey 87
                  ++l  ++ a+++++ ++ky++ +
    EPX71249.1 69 IVLINQVAANRIRDRIEKYVQAF 91
                  667788999***********988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       771  (0.043003); expected 358.6 (0.02)
Passed bias filter:                      577  (0.0321825); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 875.53
//
Query:       EPX71250.1  [L=223]
Description: GrpE domain chaperone [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      2e-46  157.7   5.4    2.4e-46  157.4   5.4    1.1  1  GrpE            GrpE
      0.003   18.0   4.3     0.0041   17.6   4.3    1.2  1  Fez1            Fez1
     0.0059   15.9   2.5      0.008   15.5   2.5    1.2  1  DUF4763         Domain of unknown function (DUF4763)
  ------ inclusion threshold ------
      0.016   14.3   1.3      0.019   14.1   1.3    1.1  1  Atg14           Vacuolar sorting 38 and autophagy-related sub
      0.093   13.0  11.0       0.13   12.5  11.0    1.1  1  ATG16           Autophagy protein 16 (ATG16)
      0.097   13.1   4.5        6.4    7.2   0.2    2.4  2  FlaC_arch       Flagella accessory protein C (FlaC)
       0.12   12.9   4.0       0.16   12.5   4.0    1.2  1  DUF2408         Protein of unknown function (DUF2408)
       0.13   12.3   6.7       0.58   10.1   0.8    2.6  2  DUF4446         Protein of unknown function (DUF4446)
       0.14   12.5   2.2       0.25   11.7   2.2    1.4  1  Syntaxin_2      Syntaxin-like protein
       0.15   12.7   7.2       0.66   10.6   6.7    1.9  2  HIP1_clath_bdg  Clathrin-binding domain of Huntingtin-interac
       0.16   11.2   2.3        0.2   10.9   2.3    1.1  1  TMPIT           TMPIT-like protein
        0.3   10.4   5.7        0.4   10.0   5.7    1.1  1  DUF4407         Domain of unknown function (DUF4407)
        1.4    9.1   7.1         12    6.0   7.1    2.0  1  Phage_lysis     Bacteriophage Rz lysis protein
        1.8    8.7   6.3        2.6    8.1   6.3    1.2  1  DUF4337         Domain of unknown function (DUF4337)


Domain annotation for each model (and alignments):
>> GrpE  GrpE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.4   5.4   1.9e-49   2.4e-46       5     166 .]      50     219 ..      42     219 .. 0.94

  Alignments for each domain:
  == domain 1  score: 157.4 bits;  conditional E-value: 1.9e-49
                 ..CTTTHHHHCCCCCCTTCHHHCTTSCCCCCCTTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC.....HHH-HH........HHH CS
        GrpE   5 eeeeeeedeeeeleeeleelekevkelkekllrllaefenlrkrtekekeeakkfaiekfakdLLpvlDnleralksak...eneeek........sll 92 
                 + e+ee+++++e +++ e+  ke++elk+++ ++la++ n+++r++++ e+ + fa++k++kdLL+ +Dnleral+ ++        +        +l+
  EPX71250.1  50 KPETEENAQLKEIQAKYEAKSKEIAELKDNVRHKLADARNMENRMKRDMEQTRAFAVQKLVKDLLDSVDNLERALSIVPaekR---NNreankdlvDLY 145
                 66899999*********************************************************************996541...3334578999*** PP

                 HHHHHHHHHHHHHHHHTT-EE---TTSB--TTTEEEEEEECSSC...TBEEEEEE--EEETTEEEE-EEEEEEE CS
        GrpE  93 eGvemtlkqllkiLekhgvekiepkgepFDpnlheavstveddekeegtvvevvqkGYklkdrvlRpAmVkVsk 166
                 eG+ mt+ +l+k+L+k+gv++++  ge+FDpn+heav++++ + ke +t++++ +kGY+l++rv+RpA+V+++k
  EPX71250.1 146 EGLVMTESNLIKMLQKYGVVRYDGLGEQFDPNIHEAVFQIPIEGKEANTIFHCESKGYTLNGRVVRPAKVGIVK 219
                 ***********************************************************************986 PP

>> Fez1  Fez1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   4.3   3.2e-06    0.0041      38     111 ..      57     132 ..      52     173 .. 0.60

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 3.2e-06
        Fez1  38 aqlrelrakleekeeeikeleesleektlelevcenelqrk..kseaellrekvekleeelkelreelselsleee 111
                 aql+e++ak e+k +ei el++++++k ++  ++en+++r   +++a  +++ v+ l + + +l ++ls + +e++
  EPX71250.1  57 AQLKEIQAKYEAKSKEIAELKDNVRHKLADARNMENRMKRDmeQTRAFAVQKLVKDLLDSVDNLERALSIVPAEKR 132
                 5677777777777777777777777777777777777776632222223344444455555555555554433332 PP

>> DUF4763  Domain of unknown function (DUF4763)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   2.5   6.3e-06     0.008      32     116 ..      42     124 ..      29     162 .. 0.74

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 6.3e-06
     DUF4763  32 isseselpaeqeeeeeeldLdeiydelekiKqrvlelrskLalnvpecPeidecvdedlelelltseqpeileLqrnnhkLrqql 116
                     +++p+  +e+ee+ +L+ei+++ e+  +   el+ ++++++++  +++  +++d e+++   +q  +++L  +   L   l
  EPX71250.1  42 EKAAETAPK--PETEENAQLKEIQAKYEAKSKEIAELKDNVRHKLADARNMENRMKRDMEQTRAFAVQKLVKDLLDSVDNLERAL 124
                 333333333..499**********************************9999999988888877778887777766665555555 PP

>> Atg14  Vacuolar sorting 38 and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   1.3   1.5e-05     0.019      61     142 ..      37     129 ..      30     174 .. 0.62

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 1.5e-05
       Atg14  61 kiknkkakleelksliadlrerlqelkdklsqlkkeieekkkklaklsdklkkRrsdleslqneleerrkkqiaklqdaik..............r 142
                 + +n  +++e+  +   + +++l+e+++k +   kei+e k +++++ ++    r   + ++  +e+ r+  ++kl++++                
  EPX71250.1  37 NPENGEKAAETAPKPETEENAQLKEIQAKYEAKSKEIAELKDNVRHKLADA---RNMENRMKRDMEQTRAFAVQKLVKDLLdsvdnleralsivpA 129
                 555666666666666666777777777777777777777777765554443...333367777888999989998888876555544444444443 PP

>> ATG16  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5  11.0   9.9e-05      0.13      94     186 ..      49     143 ..      42     145 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 9.9e-05
       ATG16  94 yksrgelaqrllelneelqkleeklkedeerlaeleaeraaletklkdreeelre..keklvqdlqDElsaLqlqlnqaEeklrklekENkeLve 186
                  k  +e + +l+e +++ +++ +++ e + ++++  a+ +++e ++k+  e+ r    +klv+dl D ++ L+ +l+ + +++r+ ++ Nk+Lv+
  EPX71250.1  49 PKPETEENAQLKEIQAKYEAKSKEIAELKDNVRHKLADARNMENRMKRDMEQTRAfaVQKLVKDLLDSVDNLERALSIVPAEKRNNREANKDLVD 143
                 566788899***************************************99999973368***********************************8 PP

>> FlaC_arch  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.2     0.005       6.4      15      39 ..      58      82 ..      50      85 .. 0.87
   2 ?    7.0   0.5    0.0059       7.5       5      45 ..      90     146 ..      88     155 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.005
   FlaC_arch 15 eletvkkeneelsksveelkenVkd 39
                +l+ ++++ e  sk++ elk+nV+ 
  EPX71250.1 58 QLKEIQAKYEAKSKEIAELKDNVRH 82
                78999******************74 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0059
   FlaC_arch   5 lEnklsk..lsteletvkkeneelsksveelkenV..............kdllsLYE 45 
                 +En++++   +t+   v+k  ++l +sv++l++                kdl++LYE
  EPX71250.1  90 MENRMKRdmEQTRAFAVQKLVKDLLDSVDNLERALsivpaekrnnreanKDLVDLYE 146
                 6777765212347778999999999*******99999999999999999*******9 PP

>> DUF2408  Protein of unknown function (DUF2408)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   4.0   0.00013      0.16      39     124 ..      58     157 ..      31     160 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00013
     DUF2408  39 e..........vkeelkelkeeLk.kieskrdeegkFkseegkevvekgqavlngLlddcfdlvedlkaqd...geekkvasslqpiYdrLleikttLe 123
                 +           ++e+ elk++++ k+ + r+ e++ k + +++ + + q+++++Lld   +l + l+       ++++ +++l ++Y+ L+   ++L 
  EPX71250.1  58 QlkeiqakyeaKSKEIAELKDNVRhKLADARNMENRMKRDMEQTRAFAVQKLVKDLLDSVDNLERALSIVPaekRNNREANKDLVDLYEGLVMTESNLI 156
                 1333333344356667777776653566677778888777777778888999999999888876666543333488899***********998777775 PP

     DUF2408 124 n 124
                 +
  EPX71250.1 157 K 157
                 5 PP

>> DUF4446  Protein of unknown function (DUF4446)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   3.5      0.15     2e+02      39      77 ..      58      96 ..      35     102 .. 0.62
   2 ?   10.1   0.8   0.00045      0.58      41      89 ..     118     169 ..      83     173 .. 0.62

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.15
     DUF4446 39 dgksleellkekleeveelkeeseelekeieeleeklkk 77
                + k+++ + + k +e+ elk+++++  ++ +++e+++k+
  EPX71250.1 58 QLKEIQAKYEAKSKEIAELKDNVRHKLADARNMENRMKR 96
                344455555555555666666666655666666666655 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00045
     DUF4446  41 ksleellk...ekleeveelkeeseelekeieeleeklkkslqkvglvrYdA 89 
                 ++le++l+    + ++ +e++++  +l + +   e++l k+lqk+g+vrYd 
  EPX71250.1 118 DNLERALSivpAEKRNNREANKDLVDLYEGLVMTESNLIKMLQKYGVVRYDG 169
                 333333330003444444555555557888888999**************96 PP

>> Syntaxin_2  Syntaxin-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   2.2   0.00019      0.25      28      90 ..      59     124 ..      46     135 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00019
  Syntaxin_2  28 teelreklhelieeinelikktnellkklsqldnsssds...qqklqkekLkkdfkealqeFqkiq 90 
                  +e++ k +   +ei el  ++ ++l +  +++n  + +   ++ ++ +kL+kd+ +++ +++++ 
  EPX71250.1  59 LKEIQAKYEAKSKEIAELKDNVRHKLADARNMENRMKRDmeqTRAFAVQKLVKDLLDSVDNLERAL 124
                 5678888899999999999999999999999999997779988889*************9999875 PP

>> HIP1_clath_bdg  Clathrin-binding domain of Huntingtin-interacting protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   2.4     0.015        20      40      89 ..      45      94 ..      39      95 .. 0.80
   2 ?   10.6   6.7   0.00051      0.66      10      92 ..      58     144 ..      54     147 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.015
  HIP1_clath_bdg 40 keeaerkleeqkeelekLkreleakraelarlkssLesseqsgeqlssql 89
                     e a + + e + +l+++++  eak++e+a+lk  ++++     ++++++
      EPX71250.1 45 AETAPKPETEENAQLKEIQAKYEAKSKEIAELKDNVRHKLADARNMENRM 94
                    5555666678999999999999********99999999988888877766 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00051
  HIP1_clath_bdg  10 evtkqlsvarqaqeeverekkeleeelerlkeeaerkle....eqkeelekLkreleakraelarlkssLesseqsgeqlssqlaaL 92 
                      +  +     ++ +e++  k+++ ++l ++++ ++r+ +     +++ ++kL ++l ++ ++l+r+ s +  +++ + + ++ l +L
      EPX71250.1  58 QLKEIQAKYEAKSKEIAELKDNVRHKLADARNMENRMKRdmeqTRAFAVQKLVKDLLDSVDNLERALSIVPAEKRNNREANKDLVDL 144
                     5555555566778999999*******9999876655443353367899*********************************999988 PP

>> TMPIT  TMPIT-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   2.3   0.00016       0.2       9      81 ..      54     123 ..      50     168 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00016
       TMPIT   9 kefkeleetakeykqkleelsklqskcskeikkqkkrlkelksslkklkksvkeeeeeeveelkeelkerkkv 81 
                 +e  +l+e + +y++k++e+++l+++++++++  +++ +++k++++++++ +    ++ v++l +++++ ++ 
  EPX71250.1  54 EENAQLKEIQAKYEAKSKEIAELKDNVRHKLADARNMENRMKRDMEQTRAFA---VQKLVKDLLDSVDNLERA 123
                 67889**************************************999988763...455555555555444444 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   5.7   0.00031       0.4     122     233 ..      39     138 ..      31     162 .. 0.58

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00031
     DUF4407 122 elkeqlaaaltaelaeleaqiaalqaeidaaearldalraeaqkeldgtkgtgttgvaGkgpaakekkaqldaaqaelaelkakldatarlaalraela 220
                 e+ e+ a+++ +  +e++aq++++qa+++a+++++++l+++++ +l  +++ + ++++++         + +++  ++++l ++    + +++l++ l+
  EPX71250.1  39 ENGEKAAETAPKPETEENAQLKEIQAKYEAKSKEIAELKDNVRHKLADARNME-NRMKRD---------MEQTRAFAVQKLVKD--LLDSVDNLERALS 125
                 44455555678888899999999999999999999999999999998655322.333333.........333333333333333..3333333333333 PP

     DUF4407 221 eleaerakeraas 233
                  + ae++++r+a+
  EPX71250.1 126 IVPAEKRNNREAN 138
                 3333333333333 PP

>> Phage_lysis  Bacteriophage Rz lysis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   7.1    0.0095        12       4      60 ..      43     100 ..      40     166 .. 0.69

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0095
  Phage_lysis   4 ekkrqvekdnaelraakaeie.elqtrqravaeldakhtkeLadaksendrlradvaa 60 
                  ++++++ k + e +a+ +ei+ + +++ +++ael     + Lada+   +r+++d+  
   EPX71250.1  43 KAAETAPKPETEENAQLKEIQaKYEAKSKEIAELKDNVRHKLADARNMENRMKRDMEQ 100
                  56677778888889999999736788999**************************864 PP

>> DUF4337  Domain of unknown function (DUF4337)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   6.3    0.0021       2.6      68     119 ..      45     106 ..      31     110 .. 0.77

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0021
     DUF4337  68 aeelaaavdkkiakykkkiarykkekkeikk..........kAkeleaerdeaneasdkfdl 119
                 ae++ +  ++++a++k+  a+y++++kei++          +A+++e++ ++ +e++ +f++
  EPX71250.1  45 AETAPKPETEENAQLKEIQAKYEAKSKEIAElkdnvrhklaDARNMENRMKRDMEQTRAFAV 106
                 44445555566777777778999999999888889999999*****************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (223 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1840  (0.102627); expected 358.6 (0.02)
Passed bias filter:                      810  (0.0451782); expected 358.6 (0.02)
Passed Vit filter:                       115  (0.00641419); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.52u 0.29s 00:00:00.81 Elapsed: 00:00:00.41
# Mc/sec: 1637.09
//
Query:       EPX71251.1  [L=834]
Description: GTPase activating protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.7e-49  166.1   0.7    8.7e-49  166.1   0.7    2.2  2  RabGAP-TBC  Rab-GTPase-TBC domain
    1.4e-05   24.7   2.5      0.087   12.8   0.2    3.8  4  EF-hand_6   EF-hand domain
      2e-05   23.8   2.6      0.036   13.6   0.4    3.9  3  EF-hand_1   EF hand
    4.4e-05   23.8   4.3     0.0076   16.7   0.2    3.8  2  EF-hand_7   EF-hand domain pair
    0.00011   22.0   0.1    0.00028   20.7   0.1    1.7  1  GRAM        GRAM domain
  ------ inclusion threshold ------
        2.7    8.0   4.4        6.2    6.8   0.3    3.3  3  EF-hand_4   Cytoskeletal-regulatory complex EF hand


Domain annotation for each model (and alignments):
>> RabGAP-TBC  Rab-GTPase-TBC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.1   0.7   2.9e-52   8.7e-49       2     215 .]     222     426 ..     221     426 .. 0.94
   2 ?   -2.3   0.1      0.98   2.9e+03     140     180 ..     433     473 ..     429     480 .. 0.85

  Alignments for each domain:
  == domain 1  score: 166.1 bits;  conditional E-value: 2.9e-52
  RabGAP-TBC   2 elRgevWklllgyepevkrlkksekkqeksekeksklekseeskelsqIkkDvprtfpesesfknkqgqnqLeriLkaysiynpevgYcqGmndivapl 100
                 +lRge+W+l +g++       +   ++e++ k+    ++ + s  l+ I+kD+ r++pe    +n++g ++L+++L a+s+ n++vgYcq mn ++a l
  EPX71251.1 222 KLRGEIWELTSGSL-------YLRLQNEDEYKNILRAYSGKTSFSLEEIEKDLGRSLPEYPAYQNDEGIDALRNVLVAFSWKNQDVGYCQAMNIVAAAL 313
                 79***********4.......555666677777888888888888*************88999************************************ PP

  RabGAP-TBC 101 llvsldeeeaFwcfvsLlekyklrdlytsslpglkrklkvleellkkkdpklykhlkeegldlelfaikwfltlflrefpletvlrlwD.lllegekfv 198
                 l ++++e ++F ++++++ +++++ +y++++ g+  +++v e l+++ +p+l+ h+ +++++l++++++wfl lf +++pl  ++rl+D ++leg+++ 
  EPX71251.1 314 L-IHCNEAQTFYLMHKIC-EDYIPGYYSKTMYGTLIDQQVYETLVQRLMPNLHAHFVNKDIQLSIISLPWFLSLFFCTMPLPFAFRLMDfFFLEGPRV- 409
                 9.999*************.9************************************999******************************8888***88. PP

  RabGAP-TBC 199 llrvalailklleeell 215
                 l+++++a+l  +e+e+l
  EPX71251.1 410 LFQIGMAVLYDNESEIL 426
                 **********9999986 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.98
  RabGAP-TBC 140 vleellkkkdpklykhlkeegldlelfaikwfltlflrefp 180
                 +l  llk+++++l++   +   d  + +i  f+ l++++f+
  EPX71251.1 433 MLISLLKRYFSQLSDRVYKDATDKRVASITKFQLLLVTAFK 473
                 56789999999999999998999999999999999988875 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       2.6   7.7e+03      15      26 ..     514     525 ..     512     527 .. 0.83
   2 ?   -2.4   0.0       2.2   6.5e+03      13      26 ..     544     557 ..     542     558 .. 0.80
   3 !    9.2   0.0   0.00042       1.3       2      25 ..     579     602 ..     578     606 .. 0.91
   4 !   12.8   0.2   2.9e-05     0.087       5      25 ..     618     638 ..     614     642 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 2.6
   EF-hand_6  15 GkidaeElrkal 26 
                 G++++++l +++
  EPX71251.1 514 GSLTRDDLSNIY 525
                 89*****98876 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 2.2
   EF-hand_6  13 gdGkidaeElrkal 26 
                  d k+ ++E+  ++
  EPX71251.1 544 ADTKLEFDEFCIFM 557
                 5779999**99887 PP

  == domain 3  score: 9.2 bits;  conditional E-value: 0.00042
   EF-hand_6   2 lreaFklfDkdgdGkidaeElrka 25 
                 lr++F  fDk++ G+++ ++l++ 
  EPX71251.1 579 LRHLFLRFDKSRVGSLSLQDLVSG 602
                 89******************9875 PP

  == domain 4  score: 12.8 bits;  conditional E-value: 2.9e-05
   EF-hand_6   5 aFklfDkdgdGkidaeElrka 25 
                 +F+l+D d dG+ d++++ k+
  EPX71251.1 618 IFELYDSDSDGFMDKSDVLKV 638
                 8****************9875 PP

>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.1     0.047   1.4e+02      14      26 ..     545     557 ..     544     560 .. 0.87
   2 !    5.2   0.0    0.0057        17       2      26 ..     579     603 ..     578     606 .. 0.87
   3 !   13.6   0.4   1.2e-05     0.036       3      25 ..     616     638 ..     614     642 .. 0.86

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.047
                 SSEEEHHHHHHHH CS
   EF-hand_1  14 dGkIdfeEfkell 26 
                 d k++f+Ef+ ++
  EPX71251.1 545 DTKLEFDEFCIFM 557
                 6799******998 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0057
                 HHHHHHHHTTTSSSEEEHHHHHHHH CS
   EF-hand_1   2 lkeiFrefDkDgdGkIdfeEfkell 26 
                 l+ +F  fDk + G ++++++++ +
  EPX71251.1 579 LRHLFLRFDKSRVGSLSLQDLVSGI 603
                 677899***************9876 PP

  == domain 3  score: 13.6 bits;  conditional E-value: 1.2e-05
                 HHHHHHHTTTSSSEEEHHHHHHH CS
   EF-hand_1   3 keiFrefDkDgdGkIdfeEfkel 25 
                   iF+++D D dG++d+++ +++
  EPX71251.1 616 SFIFELYDSDSDGFMDKSDVLKV 638
                 579**************998765 PP

>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.3   0.6    0.0094        28      35      67 ..     536     600 ..     511     604 .. 0.57
   2 !   16.7   0.2   2.6e-06    0.0076       6      45 ..     617     678 ..     612     688 .. 0.75

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0094
   EF-hand_7  35 a................................gegsklsdeelellfkefDtdkdGvisfdEFl 67 
                 +                                  + + s+  l++lf  fD+++ G++s+++++
  EPX71251.1 536 HefevsnsadtklefdefcifmggvtdwaknldAAAINGSSSFLRHLFLRFDKSRVGSLSLQDLV 600
                 15555555555555555555555555555554433333344458899999999999999998875 PP

  == domain 2  score: 16.7 bits;  conditional E-value: 2.6e-06
   EF-hand_7   6 eaFkelDtdgdgyldkeellr......................llrkifqgagegsklsdee 45 
                  +F+++D+d dg++dk+++l+                      ++++ f++a+e+s+ ++ee
  EPX71251.1 617 FIFELYDSDSDGFMDKSDVLKvseallwitrymgdeclsavseFIQRCFHFADEASPEHREE 678
                 68****************99878877777777777777766666666666667777777665 PP

>> GRAM  GRAM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.1   9.4e-08   0.00028      29     104 ..      56     126 ..      23     135 .. 0.81

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 9.4e-08
                 SEEEEEEEEESSEEEEEE-STT---EEEEEGGGEEEEEE....-TT-TT-EEEEESS-..EEEEE--TTHHHHHHH CS
        GRAM  29 gpvqGrlyltnyrlcFrskplgsskkvvlpladikriekstsaanllengiqvetsskdlelaFagfvtrdeaief 104
                     G+lyl + +++Fr+++ g++  + +p++ i++++k   ++  +e++++v ts+   e++ +  v+ ++a +f
  EPX71251.1  56 KSLLGVLYLFTDYIAFRGDEEGTQ--FCMPYTIIRKVSK--VKSDDYEQLLSVSTSNGY-EFRISLQVSESTALRF 126
                 5678*******************9..9************..888889***********9.****999999988766 PP

>> EF-hand_4  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.3    0.0021       6.2      56      74 ..     544     562 ..     483     571 .. 0.82
   2 ?   -0.3   0.1      0.33   9.9e+02      44      62 ..     614     632 ..     603     640 .. 0.84
   3 ?   -0.6   0.0      0.43   1.3e+03       9      57 ..     760     812 ..     757     818 .. 0.77

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0021
   EF-hand_4  56 edgkldfeefciamrlifd 74 
                  d kl+f+efci m  + d
  EPX71251.1 544 ADTKLEFDEFCIFMGGVTD 562
                 699**********976655 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.33
   EF-hand_4  44 klekiwdladidedgkldf 62 
                 +++ i++l d d+dg +d 
  EPX71251.1 614 NISFIFELYDSDSDGFMDK 632
                 567899*********9996 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.43
   EF-hand_4   9 ikkyweifsglkpednkltgdkvapvlknskleedk...lekiw.dladided 57 
                  +++ e f+  k + n  ++d++++  + s l++d     ek+    +dided
  EPX71251.1 760 TNRWSETFRNHKHVANIPSSDNATSTGHRSYLTSDDtsnYEKVKsRTSDIDED 812
                 56777899999999999999999999999999887511155665246899988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (834 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       725  (0.0404373); expected 358.6 (0.02)
Passed bias filter:                      540  (0.0301188); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.68u 0.28s 00:00:00.96 Elapsed: 00:00:00.44
# Mc/sec: 5692.08
//
Query:       EPX71252.1  [L=156]
Description: prefoldin subunit 5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.2e-25   89.7   1.0    2.6e-25   88.7   0.2    1.7  2  Prefoldin    Prefoldin subunit
    2.2e-06   28.0   0.4      0.038   14.4   0.1    2.3  2  Cep57_MT_bd  Centrosome microtubule-binding domain of Cep57
    4.7e-05   23.3   0.8      0.022   14.7   0.0    2.2  2  Prefoldin_2  Prefoldin subunit
     0.0041   17.3   1.5       0.72   10.0   0.1    2.3  2  COG5         Golgi transport complex subunit 5
  ------ inclusion threshold ------
      0.035   14.2   0.7       0.19   11.8   0.1    2.1  2  DUF1192      Protein of unknown function (DUF1192)
      0.035   13.5   0.5       0.63    9.4   0.1    2.0  2  Not3         Not1 N-terminal domain, CCR4-Not complex compone
      0.044   13.4   0.7       0.23   11.0   0.1    1.9  2  Filament     Intermediate filament protein
       0.05   14.0   0.8       0.17   12.3   0.6    1.9  1  ZapA         Cell division protein ZapA
      0.067   13.4   0.4       0.15   12.3   0.4    1.6  1  PHM7_cyt     Cytosolic domain of 10TM putative phosphate tran
      0.097   12.9   2.8       0.42   10.8   0.5    2.1  2  Fib_alpha    Fibrinogen alpha/beta chain family
       0.17   11.8   3.4       0.47   10.5   0.2    2.4  3  Sec2p        GDP/GTP exchange factor Sec2p


Domain annotation for each model (and alignments):
>> Prefoldin  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.0   0.1    0.0064        10      86     110 ..      15      39 ..       6      43 .. 0.80
   2 !   88.7   0.2   1.6e-28   2.6e-25       2     118 ..      26     144 ..      25     146 .. 0.97

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0064
                 HHHHHHHHHHHHHHHHHHHHHHHHH CS
   Prefoldin  86 leelekqlekleeeleklkdqittl 110
                 le+l + +++l+ ele+l++ + +l
  EPX71252.1  15 LEQLAEVIKQLNTELEYLSSSYAQL 39 
                 6788888999999999988888876 PP

  == domain 2  score: 88.7 bits;  conditional E-value: 1.6e-28
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT..-TT-EEEEEEETTEEEEEE-.-STTEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH CS
   Prefoldin   2 keeleslqaelaqlkeaieelektletlktlkk.edegkevlvplgaglyvkaev.kdtdkvlvdlGagyyveksleeAiellkkkleelekqleklee 98 
                 + ele+l +++aql  a  ++  +l+ +k+  k e+e++ +lvpl+ +lyv++++   + kvl+d+G+gy+veks+ +Aie++++k+e+l++++e++  
  EPX71252.1  26 NTELEYLSSSYAQLGRAHVKFLGCLNSIKETVKaENEERDMLVPLTTSLYVPGKLkLGNRKVLIDIGTGYFVEKSAPDAIEYYQRKCEYLQNSIENIGS 124
                 6789************************999888*********************99999*************************************** PP

                 HHHHHHHHHHHHHHHHHHHH CS
   Prefoldin  99 eleklkdqittleanlaqly 118
                 ++e +++qi  ++  ++q++
  EPX71252.1 125 AVEAKSSQIRAVQSVMQQKA 144
                 ******************97 PP

>> Cep57_MT_bd  Centrosome microtubule-binding domain of Cep57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.1   2.3e-05     0.038      10      35 ..      15      40 ..       7      45 .. 0.89
   2 !   11.6   0.0   0.00018      0.29      47      77 .]     109     139 ..     102     139 .. 0.91

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 2.3e-05
  Cep57_MT_bd 10 keaLaevlkeLedEfehlklelqela 35
                  e+Laev+k+L  E+e l+  +++l 
   EPX71252.1 15 LEQLAEVIKQLNTELEYLSSSYAQLG 40
                 589********************985 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 0.00018
  Cep57_MT_bd  47 krkRkdLaeeleelvkrlEaKadqIykLydv 77 
                  +rk + L++++e++ +++EaK+ qI +++ v
   EPX71252.1 109 QRKCEYLQNSIENIGSAVEAKSSQIRAVQSV 139
                  69999*********************99865 PP

>> Prefoldin_2  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.2    0.0025       4.1      72      95 ..      16      39 ..      11      64 .. 0.59
   2 !   14.7   0.0   1.4e-05     0.022      53     105 ..      94     146 ..      83     147 .. 0.91

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0025
                 HHHHHHHHHHHHHHHHHHHHHHHH CS
  Prefoldin_2 72 etlekeiktlekqleklekeleel 95
                 e+l ++ik+l+ +le+l   +++l
   EPX71252.1 16 EQLAEVIKQLNTELEYLSSSYAQL 39
                 555555555555555555555444 PP

  == domain 2  score: 14.7 bits;  conditional E-value: 1.4e-05
                  TEEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTS- CS
  Prefoldin_2  53 dvlvkqdkeevkeeLeerketlekeiktlekqleklekeleelkeelqkklqq 105
                  + +v+++ ++++e  + + e+l+  i+++ +  e +  +++ ++++ q+k  +
   EPX71252.1  94 GYFVEKSAPDAIEYYQRKCEYLQNSIENIGSAVEAKSSQIRAVQSVMQQKATD 146
                  57***********************************************9876 PP

>> COG5  Golgi transport complex subunit 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.1   0.00044      0.72      67      92 ..      15      40 ..       9      73 .. 0.89
   2 !    6.6   0.2    0.0051       8.4      78     110 ..     109     141 ..      98     148 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00044
                XXXXXXXXXXXXXXXXXXXXXXXXXX CS
        COG5 67 skslssvlselksslesLsasyerlk 92
                 ++l +v ++l+++le+Ls+sy +l 
  EPX71252.1 15 LEQLAEVIKQLNTELEYLSSSYAQLG 40
                5677889****************995 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0051
                 XXXXXXXXXXXXXXX-TTHHHHHHHHHHHHHHH CS
        COG5  78 ksslesLsasyerlkskvlepyeeaeklqsalk 110
                 + + e+L++s+e + s v  +  +++ +qs ++
  EPX71252.1 109 QRKCEYLQNSIENIGSAVEAKSSQIRAVQSVMQ 141
                 66889**********************999876 PP

>> DUF1192  Protein of unknown function (DUF1192)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   0.00012      0.19      16      40 ..       9      33 ..       3      40 .. 0.87
   2 ?    0.3   0.0      0.46   7.5e+02      31      55 ..     114     138 ..     109     139 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00012
     DUF1192 16 DLslLSveELeerIalLeaEIaRle 40
                +L +LS+e L e I++L  E + l+
  EPX71252.1  9 NLASLSLEQLAEVIKQLNTELEYLS 33
                899*****************98776 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.46
     DUF1192  31 lLeaEIaRleaaiakkkasraAAea 55 
                  L+  I+ +  a+++k+++  A ++
  EPX71252.1 114 YLQNSIENIGSAVEAKSSQIRAVQS 138
                 68888999999*****999888766 PP

>> Not3  Not1 N-terminal domain, CCR4-Not complex component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0     0.046        75     128     151 ..      18      41 ..       3      74 .. 0.58
   2 ?    9.4   0.1   0.00039      0.63     122     160 ..     109     147 ..      92     155 .. 0.74

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.046
        Not3 128 lkdaideLneqvekleaeieklss 151
                 l ++i++Ln+++e l +++ +l +
  EPX71252.1  18 LAEVIKQLNTELEYLSSSYAQLGR 41 
                 344455555555555444444433 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00039
        Not3 122 eearewlkdaideLneqvekleaeieklsskkkkkkksk 160
                 ++ +e+l+++i+++ + ve+  ++i  ++s +++k +++
  EPX71252.1 109 QRKCEYLQNSIENIGSAVEAKSSQIRAVQSVMQQKATDQ 147
                 567899999999999999999999999988887777533 PP

>> Filament  Intermediate filament protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.1      0.14   2.3e+02     119     140 ..      15      36 ..       2      72 .. 0.54
   2 ?   11.0   0.1   0.00014      0.23     182     231 ..      97     146 ..      82     156 .] 0.88

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.14
                 XXXXXXXXXXXXXXXXXXXXXX CS
    Filament 119 rvdLekkvesLkeelaflkkvh 140
                   +L + +++L+ el++l + +
  EPX71252.1  15 LEQLAEVIKQLNTELEYLSSSY 36 
                 3333333333333333333332 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00014
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-HHHHHHHHHHHHHHHHH CS
    Filament 182 aeknreeaeewykskleelqeaaeknsealrsakeeitelrrqiqsleie 231
                 +ek+  +a e+y++k+e lq+++e+ ++a+++  ++i  ++  +q++ ++
  EPX71252.1  97 VEKSAPDAIEYYQRKCEYLQNSIENIGSAVEAKSSQIRAVQSVMQQKATD 146
                 789999999********************************999998765 PP

>> ZapA  Cell division protein ZapA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.6   0.00011      0.17      20      69 ..      16      65 ..       5     138 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00011
        ZapA 20 eylreaaklvdekikeireaggnlseerllvmaaLnladellklkkraee 69
                e+l e+ k+++++++ +++++ +l++  +  + +Ln  +e  k+++++++
  EPX71252.1 16 EQLAEVIKQLNTELEYLSSSYAQLGRAHVKFLGCLNSIKETVKAENEERD 65
                7899****************************************999865 PP

>> PHM7_cyt  Cytosolic domain of 10TM putative phosphate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.4   9.3e-05      0.15      76     134 ..      64     145 ..      11     155 .. 0.56

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 9.3e-05
    PHM7_cyt  76 r...................pthklgflglkl.igkkv.daidyyrekleeldeeieeerekvkkkplgaaFv..tfesers 134
                 r                   + + l   g++  ++k   dai+yy++k e l+  ie   + v++k +++  v   ++++  
  EPX71252.1  64 RdmlvplttslyvpgklklgNRKVLIDIGTGYfVEKSApDAIEYYQRKCEYLQNSIENIGSAVEAKSSQIRAVqsVMQQKAT 145
                 156666666666665555552222222333330333324**********************998887655444104443333 PP

>> Fib_alpha  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.1      0.11   1.7e+02     104     128 ..      15      39 ..       5      67 .. 0.65
   2 ?   10.8   0.5   0.00026      0.42      70     115 ..      99     144 ..      95     152 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.11
                 HHHHHHHHHHHHHHHHHHHHHHHHH CS
   Fib_alpha 104 irvLqnvlesneqkiqkLeqdidqk 128
                 +++L +v+++++ +++ L +  +q+
  EPX71252.1  15 LEQLAEVIKQLNTELEYLSSSYAQL 39 
                 5555666666666665555555544 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00026
                 HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHH CS
   Fib_alpha  70 kskkdndnvikksskeleeeilrlketidaqesnirvLqnvlesne 115
                 ks++d  +++++  + l++ i+++   + a+ s+ir+ q+v++++ 
  EPX71252.1  99 KSAPDAIEYYQRKCEYLQNSIENIGSAVEAKSSQIRAVQSVMQQKA 144
                 67777789999999***************************99764 PP

>> Sec2p  GDP/GTP exchange factor Sec2p
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.1      0.13   2.1e+02      15      28 ..      21      34 ..       5      41 .. 0.68
   2 ?   -3.0   0.0       4.6   7.5e+03      10      17 ..      57      64 ..      51      74 .. 0.55
   3 ?   10.5   0.2   0.00029      0.47      46      90 ..     106     150 ..      97     152 .. 0.89

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.13
                HHHHHHHHHHHHHH CS
       Sec2p 15 ekkklekEledLta 28
                  k+l++Ele L++
  EPX71252.1 21 VIKQLNTELEYLSS 34
                34566777776665 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 4.6
                HHHHHHHH CS
       Sec2p 10 eeaekekk 17
                 +ae+e++
  EPX71252.1 57 VKAENEER 64
                34444443 PP

  == domain 3  score: 10.5 bits;  conditional E-value: 0.00029
                 HHHHHHHHHHHHHHTTHCHCCCHCTSSSSHHHHCTTTXXXXXXXX CS
       Sec2p  46 ealekkneklkeqLkeketlleslqeqLkeLkevlekmeeeseeq 90 
                 e +++k e l++ +++  + +e++++q +  ++v+++  ++++ +
  EPX71252.1 106 EYYQRKCEYLQNSIENIGSAVEAKSSQIRAVQSVMQQKATDQNMK 150
                 56899*******************************999888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1276  (0.0711696); expected 358.6 (0.02)
Passed bias filter:                      731  (0.0407719); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1125.34
//
Query:       EPX71253.1  [L=417]
Description: COP9/signalosome complex subunit Csn1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.2e-44  150.3   1.4      8e-44  149.4   1.4    1.5  1  RPN7      26S proteasome subunit RPN7
    1.2e-15   57.9   0.6    3.5e-14   53.2   0.0    2.7  2  PCI       PCI domain
    7.2e-05   22.6   0.5      0.074   13.2   0.0    2.8  2  TPR_2     Tetratricopeptide repeat
     0.0024   17.6   1.9       0.71    9.8   0.1    3.0  3  TPR_1     Tetratricopeptide repeat
     0.0041   17.4   0.3       0.71   10.2   0.1    2.5  2  TPR_12    Tetratricopeptide repeat
     0.0056   17.4   0.1       0.36   11.8   0.1    2.6  2  TPR_14    Tetratricopeptide repeat
     0.0085   16.1   0.3        8.2    6.7   0.0    2.8  2  TPR_7     Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.066   12.8   0.6        0.2   11.3   0.2    2.0  2  Nudix_N   Hydrolase of X-linked nucleoside diphosphate N term


Domain annotation for each model (and alignments):
>> RPN7  26S proteasome subunit RPN7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.4   1.4   3.5e-47     8e-44       1     173 [.      76     245 ..      76     246 .. 0.98

  Alignments for each domain:
  == domain 1  score: 149.4 bits;  conditional E-value: 3.5e-47
                 -HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHCT-HHHHHHHHHTCCCC--SHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHH CS
        RPN7   1 DekwveelrkknekeleeLdaelkdakenlgkeeirrakldlaehYlkigdleeAlkaysrireyctslkhkidmllnlirvaiffndwdlvskyleka 99 
                 D +w+++++ + +++l++L +elk +k+nl+ e+ir a+ dla ++++ g++e+Al+ay+++reyct++ +++++ l l+rv+i+++++++v  + ++a
  EPX71253.1  76 DLSWIDSVTYHRKQNLDHLTKELKSYKNNLIRESIRSAQVDLASFFTDLGQFESALRAYAKVREYCTNAAQIAHLSLDLMRVSIWMENYSHVLAFGSRA 174
                 568************************************************************************************************ PP

                 HCSSS---.HHHHHHHHHHHHHHHHHTT-HHHHHHHHCTS-GGGT.TTT--HHHHHHHHHHHHHHH--HHHHHH CS
        RPN7 100 kellekggdwerknrlkvyeGlallairkfkeAaellldilstftskellsyedlavyavlcalatldRkdLka 173
                 k++ +++  +e k  + +y+Gla++  +++k+A +++l i+++f s+ ll+  d+ +y+ +cal+++d+++L +
  EPX71253.1 175 KSTFSSA--MEIKSTVYAYCGLAHMCLGDYKSALDHFLHIEPDF-SDILLTKTDVSTYTCICALVSWDHNELLQ 245
                 ******6..9**********************************.8**************************87 PP

>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.1      0.11   2.4e+02       2      32 ..      78     108 ..      77     157 .. 0.84
   2 !   53.2   0.0   1.5e-17   3.5e-14      10     104 ..     270     364 ..     261     365 .. 0.91

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.11
                 HHHHHHHHHHHTSHHHHHHHHHHHHHHHHHH CS
         PCI   2 sysdllkalrsgnlsgfseelkdleeellad 32 
                 s++d +   r++nl+   +elk+++++l+++
  EPX71253.1  78 SWIDSVTYHRKQNLDHLTKELKSYKNNLIRE 108
                 6788888899999999999999996665554 PP

  == domain 2  score: 53.2 bits;  conditional E-value: 1.5e-17
                 HHHTSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCESEEEHHHHHHHHTSSHHHHHHHHHHHHHTTSSSEEEETTTTEEEEC CS
         PCI  10 lrsgnlsgfseelkdleeelladdglaqllesLekkvrerllrqvskiyssislerlaklldlsvdevEkilvklIrdgeirakidqesgivvfk 104
                 +  +n+s+   +l+ +  e+  d++la++l+ +   +rer+l  + ++ys i+++++a+ ++++   vE +l ++++ ++i+ak+d  +++v+++
  EPX71253.1 270 MSQRNYSSLFNTLQANFPEYAFDMYLAPHLSTFLSLIRERSLVDYLFPYSAIPMKKIASDFQVDLPFVEDFLLQMVEAQKINAKLDCLNKCVYME 364
                 44556888888888888999*************************************************************************97 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.1    0.0034       7.6      13      31 ..     123     141 ..     113     144 .. 0.82
   2 !   13.2   0.0   3.3e-05     0.074       3      25 ..     188     210 ..     186     212 .. 0.91

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0034
       TPR_2  13 klgdyeeAleafekAleld 31 
                  lg++e Al+a+ k+ e++
  EPX71253.1 123 DLGQFESALRAYAKVREYC 141
                 79************98876 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 3.3e-05
       TPR_2   3 alynlGlayyklgdyeeAleafe 25 
                 ++ + Gla++ lgdy+ Al++f 
  EPX71253.1 188 VYAYCGLAHMCLGDYKSALDHFL 210
                 68899****************95 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.2   0.0    0.0045        10       7      27 ..     117     137 ..     113     143 .. 0.84
   2 !    9.8   0.1   0.00032      0.71       3      24 ..     188     209 ..     186     210 .. 0.90
   3 ?   -3.7   0.0       5.6   1.3e+04      24      30 ..     385     391 ..     385     392 .. 0.71

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0045
                 HHHHHHHTT-HHHHHHHHHHH CS
       TPR_1   7 lGnayfklgkydeAleyyekA 27 
                 l+  +  lg+++ Al +y k+
  EPX71253.1 117 LASFFTDLGQFESALRAYAKV 137
                 5666889***********886 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00032
                 HHHHHHHHHHHTT-HHHHHHHH CS
       TPR_1   3 alynlGnayfklgkydeAleyy 24 
                 ++   G+a++ lg+y+ Al+++
  EPX71253.1 188 VYAYCGLAHMCLGDYKSALDHF 209
                 57788***************98 PP

  == domain 3  score: -3.7 bits;  conditional E-value: 5.6
                 HHHHHHH CS
       TPR_1  24 yekALel 30 
                 y+kA+ l
  EPX71253.1 385 YSKAIHL 391
                 7788876 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.1   0.00032      0.71       3      35 ..     111     143 ..     109     153 .. 0.87
   2 ?    4.6   0.0     0.018        39      47      68 ..     190     209 ..     174     212 .. 0.67

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00032
      TPR_12   3 atalnnlaavlrrlgrydeAlellekaleiarr 35 
                  +a++ la++ + lg+++ Al+ + k++e +++
  EPX71253.1 111 RSAQVDLASFFTDLGQFESALRAYAKVREYCTN 143
                 678999*********************998855 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.018
      TPR_12  47 tlrnLgrlyralgryeeAlell 68 
                 ++++L+ +   lg+y+ Al+++
  EPX71253.1 190 AYCGLAHM--CLGDYKSALDHF 209
                 44444444..477777777766 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   0.1   0.00016      0.36       3      29 ..     113     139 ..     111     152 .. 0.85
   2 ?    2.6   0.0      0.14   3.1e+02       5      25 ..     190     210 ..     187     222 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00016
      TPR_14   3 allalaeallalGdpdeAiallrrala 29 
                 a+ +la+++  lG+++ A++++ ++ +
  EPX71253.1 113 AQVDLASFFTDLGQFESALRAYAKVRE 139
                 7899******************99866 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.14
      TPR_14   5 lalaeallalGdpdeAiallr 25 
                 +  + a++ lGd++ A++++ 
  EPX71253.1 190 AYCGLAHMCLGDYKSALDHFL 210
                 555899***********9885 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.5   0.1    0.0043       9.7       5      24 ..     117     136 ..     115     154 .. 0.89
   2 !    6.7   0.0    0.0037       8.2       2      23 ..     189     210 ..     188     222 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0043
       TPR_7   5 LarlysrlGdyeeAielyeq 24 
                 La+ + +lG++e A++ y +
  EPX71253.1 117 LASFFTDLGQFESALRAYAK 136
                 9***************9987 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0037
       TPR_7   2 LlnLarlysrlGdyeeAielye 23 
                 + + + ++  lGdy+ A++++ 
  EPX71253.1 189 YAYCGLAHMCLGDYKSALDHFL 210
                 678899************9885 PP

>> Nudix_N  Hydrolase of X-linked nucleoside diphosphate N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       4.3   9.6e+03      32      53 ..      90     111 ..      87     112 .. 0.78
   2 ?   11.3   0.2     9e-05       0.2      20      37 ..     362     379 ..     361     386 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 4.3
     Nudix_N  32 eLreiaaellaevsdlpaekvk 53 
                  L ++  el +++ +l +e+++
  EPX71253.1  90 NLDHLTKELKSYKNNLIRESIR 111
                 6788888998888888888876 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 9e-05
     Nudix_N  20 YakdvYDreRYeeLreia 37 
                 Y +  ++reR++e+++ia
  EPX71253.1 362 YMESSFERERFQEIQDIA 379
                 88999************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (417 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1027  (0.0572815); expected 358.6 (0.02)
Passed bias filter:                      591  (0.0329634); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 3069.27
//
Query:       EPX71254.1  [L=64]
Description: hypothetical protein SOCG_06508 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       907  (0.0505884); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.41
# Mc/sec: 473.54
//
Query:       EPX71255.1  [L=381]
Description: glycerol-3-phosphate dehydrogenase Gpd1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-57  193.8   0.0      6e-56  188.8   0.0    2.1  2  NAD_Gly3P_dh_N  NAD-dependent glycerol-3-phosphate dehydrogen
    8.2e-44  149.3   0.1    1.6e-43  148.4   0.1    1.5  1  NAD_Gly3P_dh_C  NAD-dependent glycerol-3-phosphate dehydrogen
    7.7e-05   23.2   0.1     0.0006   20.4   0.1    2.3  1  F420_oxidored   NADP oxidoreductase coenzyme F420-dependent
     0.0054   16.6   1.6          2    8.3   0.0    2.8  3  Rossmann-like   Rossmann-like domain


Domain annotation for each model (and alignments):
>> NAD_Gly3P_dh_N  NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.8   0.0   1.3e-59     6e-56       2     154 ..      22     192 ..      21     194 .. 0.98
   2 ?    2.9   0.0     0.022     1e+02     118     145 ..     310     335 ..     302     340 .. 0.73

  Alignments for each domain:
  == domain 1  score: 188.8 bits;  conditional E-value: 1.3e-59
                     EEEE--SHHHHHHHHHHHTTT........--EEEE-S-H.........HHHHHHHHHSSBTTTBTT----TTEEEES-HHHHHTT--EEEE---H CS
  NAD_Gly3P_dh_N   2 iavlGaGswGtalAkvlaeng........hevrlwvree.........elieeineehenvkyLpgiklpenlvattdlaealkgadiivlvvPs 79 
                     ++v+G+G+wGta+Ak+++en+        ++vr+wv+ee         +l+e++ne+henvkyLpg+++p n+ a++d++e+++++d++v+vvP+
      EPX71255.1  22 VGVIGSGNWGTAIAKICGENArahghhfrSKVRMWVFEEeiehkgekrKLTEVFNETHENVKYLPGVECPPNVIAVPDVREVARRSDVLVFVVPH 116
                     89********************************************************************************************* PP

                     HHHHHHHHHHCCC--TT-EEEE---SE..ET.TTEEHHHHHHHHH-S--EEEEESS--HHHHHTT--EEEEEEES-H CS
  NAD_Gly3P_dh_N  80 qalrevlkklkgllkkkailvsliKGi..eegtlkllsevieeelkeekvavlsGpslAeEvakgkptavviaskdk 154
                     q++++v+++++g+l+++a+ +s+iKG+   +++++l+s+vi+e+l+++ ++vlsG+++A+Evak+++++++i++k +
      EPX71255.1 117 QFINRVCDQMAGHLRPNAVGISCIKGVsvGKDGVRLFSDVIQEKLGIY-CGVLSGANVANEVAKEQFCETTIGYKPP 192
                     ***************************887789***************.************************9876 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.022
                     HHHHH-S--EEEEESS--HHHHHTT--E CS
  NAD_Gly3P_dh_N 118 ieeelkeekvavlsGpslAeEvakgkpt 145
                     +e+el       l G+s A+Ev +   t
      EPX71255.1 310 LEKELLGG--QLLQGASTAKEVHEFLST 335
                     55444444..489*********886655 PP

>> NAD_Gly3P_dh_C  NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.4   0.1   3.7e-47   1.6e-43       1     141 [.     217     362 ..     217     363 .. 0.95

  Alignments for each domain:
  == domain 1  score: 148.4 bits;  conditional E-value: 3.7e-47
                     -HHHHHHHHHHHHHHHHHHHHHHHTTH-HHHHHHHHHHHHHHHHHHHHHHTS.SGGGGG.STTTHHHHHHHHHSCT.HHHHHHHHHHC.T--HHH CS
  NAD_Gly3P_dh_C   1 DviGvelagalKNviAiaaGivdglglgdntkaalitrglaEmarlakalga.kpetfl.glaglgDlivtctsgksRNrrfGeelgk.geslee 92 
                     Dv+Gv l+galKN++A+a+G++dg+++g ntk+a+++rgl Em+++a+++   +p t++ +++g++Dl+++c++g  RN r++e+ +k g+ ++ 
      EPX71255.1 217 DVAGVALGGALKNIVAMAVGFADGMEWGGNTKSAIMRRGLLEMQKFATTFFDsEPGTMVeQSCGIADLVTSCLGG--RNNRVAEAYVKsGKPIDV 309
                     9************************************************95545889999***************..***********9899999 PP

                     HHH.HHC.C--HHHHHHHHHHHHHHHTT...G.HHHHHHHHHHHS---HHHHH CS
  NAD_Gly3P_dh_C  93 iek.eln.qvleGvetakevyellkkkgv..emplleavykilyegkspeeli 141
                     +ek  l+ q l+G++takev+e+l+ k++  e+pl+++vyki+ye++++++li
      EPX71255.1 310 LEKeLLGgQLLQGASTAKEVHEFLSTKDMvnEFPLFRSVYKICYENMDAKDLI 362
                     99977789****************9998779******************9987 PP

>> F420_oxidored  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.1   1.3e-07    0.0006       2      95 ..      22     140 ..      21     142 .. 0.86

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 1.3e-07
                    EEEETTSHHHHHHHHHHHHTTS.-GGCEEEEEESSCCCHHHHHHHHC..........................-EEECECHHHHHHH-SEEEE-S- CS
  F420_oxidored   2 igiiGaGnmgealasgllaaga.qpheivvansrnpekaeelaeelg..........................vkvtavdneeaaeeadvvvlavk 70 
                    +g+iG+Gn g a+a+ + ++ + + h+++    r+    ee++ + +                          v + + d  e+a+++dv+v+ v+
     EPX71255.1  22 VGVIGSGNWGTAIAKICGENARaHGHHFR-SKVRMWVFEEEIEHKGEkrkltevfnethenvkylpgvecppnVIAVP-DVREVARRSDVLVFVVP 115
                    89*************99998878778888.77888666666666555777999999***************7666666.899************** PP

                    HHHHHHHHHHCGHHHHTTSEEEEES CS
  F420_oxidored  71 pedveevlselakdalkgklvisvl 95 
                     + +  v++++a ++  + + is+ 
     EPX71255.1 116 HQFINRVCDQMAGHLRPNAVGISCI 140
                    ***********98888888888876 PP

>> Rossmann-like  Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0   0.00045         2       7      28 ..      16      37 ..       1      52 [. 0.77
   2 !    6.8   0.0    0.0013       5.9      58      97 ..      96     133 ..      86     158 .. 0.80
   3 ?   -2.9   0.1       1.3   5.6e+03      21      32 ..     218     230 ..     207     238 .. 0.61

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00045
  Rossmann-like  7 rsarlsvGiisaGrvGtalgaa 28
                    + rl+vG+i++G+ Gta+++ 
     EPX71255.1 16 PKKRLAVGVIGSGNWGTAIAKI 37
                   467***************9875 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0013
  Rossmann-like  58 pvlevedvaaraellllavPdaelpglvkglaatgavraG 97 
                    +v +v++va+r+++l++ vP   +  + +++a +  +r+ 
     EPX71255.1  96 AVPDVREVARRSDVLVFVVPHQFINRVCDQMAGH--LRPN 133
                    4557999******************999999988..5554 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 1.3
  Rossmann-like  21 v.Gtalgaalera 32 
                    v G+alg al+ +
     EPX71255.1 218 VaGVALGGALKNI 230
                    3367777777654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (381 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       458  (0.0255452); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.38
# Mc/sec: 3011.23
//
Query:       EPX71256.1  [L=195]
Description: hypothetical protein SOCG_01475 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.3e-15   54.4   3.8    1.9e-14   53.2   3.8    1.7  1  zf-LYAR         LYAR-type C2HC zinc finger
     0.0017   17.2  12.9      0.002   17.0  12.9    1.0  1  Raftlin         Raftlin
  ------ inclusion threshold ------
      0.048   13.3   2.7        1.2    8.8   0.0    2.5  2  zf_UBZ          Ubiquitin-Binding Zinc Finger
       0.37   10.6  12.8       0.49   10.2  12.8    1.3  1  BMP2K_C         BMP-2-inducible protein kinase C-terminus
       0.47    9.2  16.3       0.59    8.9  16.3    1.0  1  DUF4551         Protein of unknown function (DUF4551)
        1.1    7.7  16.8        1.3    7.5  16.8    1.0  1  Macoilin        Macoilin family
        1.4    9.0   9.5        1.9    8.6   9.5    1.3  1  DDHD            DDHD domain
        2.3    6.4  12.9        2.6    6.3  12.9    1.0  1  CDC45           CDC45-like protein
        3.1    6.2  17.2        3.6    5.9  17.2    1.0  1  Peptidase_S64   Peptidase family S64
        3.2    7.1  13.6        3.8    6.8  13.6    1.1  1  DUF908          Domain of Unknown Function (DUF908)
        7.2    4.6  13.1          8    4.5  13.1    1.1  1  Hid1            High-temperature-induced dauer-formation prot
        8.2    6.0   8.4         10    5.7   7.8    1.5  1  GCD14           tRNA methyltransferase complex GCD14 subunit
          9    5.2  16.4         12    4.8  16.4    1.2  1  SLC12           Solute carrier family 12


Domain annotation for each model (and alignments):
>> zf-LYAR  LYAR-type C2HC zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.2   3.8   1.4e-17   1.9e-14       1      28 []      30      57 ..      30      57 .. 0.99

  Alignments for each domain:
  == domain 1  score: 53.2 bits;  conditional E-value: 1.4e-17
     zf-LYAR  1 fsCiDCsktFdgdeykaHtsCItEaeKY 28
                f+CiDC++tF+g++y++H+sC+tEa++Y
  EPX71256.1 30 FTCIDCNTTFQGTDYRSHSSCMTEAQRY 57
                9**************************9 PP

>> Raftlin  Raftlin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0  12.9   1.4e-06     0.002     174     313 ..      42     191 ..       9     193 .. 0.77

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 1.4e-06
     Raftlin 174 sssltsgaaeseeardekkkrsssedkvslenekpgalsgksseagaeeeaeseegkkgegpaaeqlqlssaeeegsespskskkgeeelskted.... 268
                 +   +++++++e +r +k   + ++++++++n++ g++++++++ +a+e++e++e++++ +p++++ + +s ee+g+e+ +k+kk++++++k +     
  EPX71256.1  42 TDYRSHSSCMTEAQRYQKGLYRPTKKELKKMNQENGTVNTNTTTGKAKETSETSEKEQTSSPTSKKRS-NSPEESGEEKDNKKKKSSSKNKKSSPveqm 139
                 3334466778888899999999999999999999*********9999999999999999999988888.666777777776666666644444446779 PP

     Raftlin 269 .......klskklelfalFnkpkseqkcrqYyevtlslrvsrkgqvvssLdA 313
                        + ++  +l+   nk  s++++ + ++v  +l+v ++   v +L A
  EPX71256.1 140 lslcqkdENESLYKLLKKHNKNASKNETLEAKDVLKQLQVCKNADGVFNLKA 191
                 999854444455556666689999999999999**********999998887 PP

>> zf_UBZ  Ubiquitin-Binding Zinc Finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   1.0      0.03        41       2      20 ..       3      21 ..       2      22 .. 0.91
   2 ?    8.8   0.0   0.00089       1.2       2      21 ..      29      48 ..      28      48 .. 0.93

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.03
      zf_UBZ  2 tylCerCgkeipeselqEH 20
                ++ Ce C+  i  ++l++H
  EPX71256.1  3 SFCCEVCQDIIKKPKLDQH 21
                577**************** PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00089
      zf_UBZ  2 tylCerCgkeipeselqEHe 21
                +++C +C+++++ ++  +H+
  EPX71256.1 29 YFTCIDCNTTFQGTDYRSHS 48
                69****************96 PP

>> BMP2K_C  BMP-2-inducible protein kinase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2  12.8   0.00035      0.49      71     150 ..      67     151 ..      36     176 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00035
     BMP2K_C  71 qkvKqrslqklssrqrrt...kqessksnGkrhhgtptstkktlkPayrtperarrhkkvgrrdsqss..neflttsdskeniSi 150
                 + +K+ + ++ +++ ++t    +e+s++  k   + pts k++++P ++ +e+  ++kk+++++++ss   ++l+  +  en S+
  EPX71256.1  67 KELKKMNQENGTVNTNTTtgkAKETSETSEKEQTSSPTSKKRSNSPEESGEEKDNKKKKSSSKNKKSSpvEQMLSLCQKDENESL 151
                 445555554444443333111467778889*******************************999888744688888888888776 PP

>> DUF4551  Protein of unknown function (DUF4551)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9  16.3   0.00043      0.59      85     249 ..      20     177 ..      18     188 .. 0.69

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00043
     DUF4551  85 kdrercqHirityvtestalkselllskdkkselfkvspskasekksrressgaakkssslnessldakekeektvskksqlslslselrklseeekee 183
                 ++r rcq    t++  +t+ + ++  s+ +  + +++ ++    +  ++e + +++++ ++n ++++ k+ke++ +s+k q+s ++s+ r++s ee  e
  EPX71256.1  20 QHRSRCQGAYFTCIDCNTTFQGTDYRSHSSCMTEAQRYQK-GLYRPTKKELKKMNQENGTVNTNTTTGKAKETSETSEKEQTSSPTSKKRSNSPEESGE 117
                 6899999999999988888888888776555554444444.5555566666668888889998888888888888899999998889999999999999 PP

     DUF4551 184 lesekalkslrsasrplPesllsrapkppsspkeppssslskderdskseessqvelrlgsvlsrl 249
                 ++++k+ ks+++     P++ + +  +  ++++e+  + l+k+++++ +    + +l+++ vl++l
  EPX71256.1 118 EKDNKKKKSSSKNKKSSPVEQMLSLCQ--KDENESLYKLLKKHNKNASK----NETLEAKDVLKQL 177
                 999999999899999999887333333..34444444444444443333....3445555555554 PP

>> Macoilin  Macoilin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5  16.8   0.00092       1.3     289     417 ..      47     167 ..      11     190 .. 0.53

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.00092
    Macoilin 289 menkskskrlsksessgsesellveesvkskssssssssnknskkasagsagssnssskkhsessksvtsssssknskkqklpaGkssaalkdaaensl 387
                 +++ +++++ +++     +++ l++ + ++++  +++++  + k++s +s + ++ss+   +++s+s+ +s ++k++kk+k +   s++++  ++e++l
  EPX71256.1  47 HSSCMTEAQRYQKGLYRPTKKELKKMNQENGTVNTNTTT-GKAKETSETSEKEQTSSPT-SKKRSNSPEESGEEKDNKKKKSS---SKNKKSSPVEQML 140
                 334444444444444444444444444444444433333.3333334434444444444.45566777777777776666664...3445566777776 PP

    Macoilin 388 pnnqlskkdalvrLeadikkLkaeLqasrq 417
                 +   l++kd+ + L + +kk + + +++  
  EPX71256.1 141 S---LCQKDENESLYKLLKKHNKNASKNET 167
                 4...55666666555555555444444333 PP

>> DDHD  DDHD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   9.5    0.0014       1.9      89     170 ..      64     148 ..      31     189 .. 0.43

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0014
        DDHD  89 elkesltsigaalkqkvsglvsslsallnrslelaeeesaslaessksherasesskasqeskaaesstasssaksskaee..............k 170
                   k++l++++++ ++             n++++ a+e s++++++++s+ +++++s++ +es++++++++++s++++k+ +              +
  EPX71256.1  64 PTKKELKKMNQENGTV----------NTNTTTGKAKETSETSEKEQTSSPTSKKRSNSPEESGEEKDNKKKKSSSKNKK-SspveqmlslcqkdeN 148
                 2222222222222221..........11222222222222222222222222222222222222222222222221111.1233334444443330 PP

>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3  12.9    0.0019       2.6     122     218 ..      56     157 ..      20     180 .. 0.39

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0019
       CDC45 122 ayealeeeeesdeede...eeeeeddd.deeeeeeeeedeedeeedeeeskkkrk.sksdeeeesddddersrkrrrse.........psakklrrqlk 206
                  y++  + + ++e ++   e+   + + ++++ +e++ +++++e++++ ++kkr+ s +++ ee+d+++++s+++++++                  +k
  EPX71256.1  56 RYQKGLYRPTKKELKKmnqENGTVNTNtTTGKAKETS-ETSEKEQTSSPTSKKRSnSPEESGEEKDNKKKKSSSKNKKSspveqmlslC--------QK 145
                 4444444444442222111111111110111111111.111111111222222221111111112222222222222221222222220........22 PP

       CDC45 207 kerrkyeavlek 218
                 +e+++  + l+k
  EPX71256.1 146 DENESLYKLLKK 157
                 222222222222 PP

>> Peptidase_S64  Peptidase family S64
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9  17.2    0.0026       3.6      31     153 ..      48     171 ..      31     190 .. 0.61

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0026
  Peptidase_S64  31 skesgesssslke.lrpifeseka.seeessaeedsstelaesssekssskqssSlfSksrktystkqssaksssskakksssvakaedvgkplrv 124
                    s+  +e ++ +k   rp+ ++ k+ ++e+ + +++++t +a+++se+s++ q+sS  S ++++ s ++s ++++++k+k ss+++k + v++ l  
     EPX71256.1  48 SSCMTEAQRYQKGlYRPTKKELKKmNQENGTVNTNTTTGKAKETSETSEKEQTSSPTS-KKRSNSPEESGEEKDNKKKKSSSKNKKSSPVEQMLSL 142
                    3333333332222023332222220222222233333333446677777777888888.7788889999999999887777888999999****** PP

  Peptidase_S64 125 letekltslntvleeeeeskekseesess 153
                     ++++ +sl + l++++++++k+e+ e++
     EPX71256.1 143 CQKDENESLYKLLKKHNKNASKNETLEAK 171
                    **999999999999998888777553322 PP

>> DUF908  Domain of Unknown Function (DUF908)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8  13.6    0.0028       3.8     165     243 ..      82     168 ..      43     183 .. 0.57

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0028
      DUF908 165 sesli...........ssspstPtplrrssklgktssspsspaktstpskaaksqeglktfeipesevsskslyellakavekiPkesry 243
                 + +++           ++++s+Pt ++rs++ ++ s +++ ++k++++sk++ks+   +++ + ++  +++sly+ll+k+ ++  k++  
  EPX71256.1  82 N-TTTgkaketsetseKEQTSSPTSKKRSNSPEE-SGEEKDNKKKKSSSKNKKSSPVEQMLSLCQKD-ENESLYKLLKKHNKNASKNETL 168
                 1.11112222333444667777877777765554.22233333444444444445555566666666.5677888888887766666655 PP

>> Hid1  High-temperature-induced dauer-formation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5  13.1    0.0058         8     588     657 ..      66     139 ..      30     188 .. 0.43

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.0058
        Hid1 588 e....sarldsideeeeenssessrieesrsesrspslsevpelksslaitddeskaereksatessssqavsq 657
                 +    + ++++ + ++++++ + ++++e+++++++ s++++++ +s  + ++++++++++ s+++++ss++++ 
  EPX71256.1  66 KkelkKMNQENGTVNTNTTTGKAKETSETSEKEQTSSPTSKKRSNSPEESGEEKDNKKKKSSSKNKKSSPVEQM 139
                 02222222222233333333333333333333333334444444444444444444444444444444444441 PP

>> GCD14  tRNA methyltransferase complex GCD14 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   7.8    0.0076        10     138     233 ..      40     137 ..      33     172 .. 0.69

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0076
       GCD14 138 eggrlCsfsPCieqvqrtceaLrelgfteietlevllrtyevrkskleeidlaekrleenerkriekakrrka...skdakvedkssksstevllkPvs 233
                 +g+   s s C+   qr  + L     +e++ ++    t ++ +++ +  + +e+ ++e+ ++ ++ +kr+++   s ++k ++k+ +ss++  + Pv+
  EPX71256.1  40 QGTDYRSHSSCMTEAQRYQKGLYRPTKKELKKMNQENGTVNTNTTTGKAKETSETSEKEQTSS-PTSKKRSNSpeeSGEEKDNKKKKSSSKNKKSSPVE 137
                 67778899*************************999999888887776666655555554333.33333332222222222222222234445555654 PP

>> SLC12  Solute carrier family 12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8  16.4    0.0086        12     149     240 ..      58     157 ..      31     185 .. 0.29

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0086
       SLC12 149 e.......keeeekkkakkkklle..ekskekeekekleekdsnlslseekkeeekekkkekkkkkekkeklkkkekslllkeaskeekevleeitqfq 238
                 +       k +e kk ++++ +++  +++ + +e+++++ek++++s +++k++++ e++ e+k++k+kk+++k+k++s + +  s  +k+  e++ ++ 
  EPX71256.1  58 QkglyrptK-KELKKMNQENGTVNtnTTTGKAKETSETSEKEQTSSPTSKKRSNSPEESGEEKDNKKKKSSSKNKKSSPVEQMLSLCQKDENESLYKLL 155
                 233333321.11111111111111221111111222222222222222211111111111111111111111111111111111111122222222222 PP

       SLC12 239 kk 240
                 kk
  EPX71256.1 156 KK 157
                 22 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3455  (0.192705); expected 358.6 (0.02)
Passed bias filter:                      748  (0.0417201); expected 358.6 (0.02)
Passed Vit filter:                       152  (0.00847788); expected 17.9 (0.001)
Passed Fwd filter:                        27  (0.00150594); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.60u 0.31s 00:00:00.90 Elapsed: 00:00:00.43
# Mc/sec: 1364.94
//
Query:       EPX71257.1  [L=590]
Description: PWWP domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.8e-17   61.5   0.3    7.8e-17   61.5   0.3    3.3  3  PWWP       PWWP domain
     0.0046   16.9   0.1      0.012   15.6   0.1    1.8  1  Med26      TFIIS helical bundle-like domain


Domain annotation for each model (and alignments):
>> PWWP  PWWP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.7       1.6   1.4e+04      67      71 ..     106     110 ..      87     129 .. 0.48
   2 !   61.5   0.3   8.7e-21   7.8e-17       1      93 [.     140     231 ..     140     234 .. 0.92
   3 ?   -6.3   5.4         2   1.8e+04      77      77 ..     355     355 ..     293     387 .. 0.66

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 1.6
                 HHHHH CS
        PWWP  67 deeey 71 
                 ++ee 
  EPX71257.1 106 KTEES 110
                 11111 PP

  == domain 2  score: 61.5 bits;  conditional E-value: 8.7e-21
                 SSTTEEEEEEESSSEEEEEEEEECCCCCCCCHCT---SSS.EEEEEETTTTEEEEE-GGGEEE-SHHHHHHHHHTTSS-HHHHHHHHHHHHHHH CS
        PWWP   1 fqpgdlvwakvkgypwWPavvidpeevpekvlkkkekske.lylVkFfgdkeyawvkekdlkpfteedeeeylkkkkkkkskkkfkkAleeaee 93 
                 ++pg  v+ k+ g+pwWP+++i ++++ +  lk+k+k+ e  ++V Ff++key w +++ l p++e+ + eyl+k k k++  ++ kA++ a++
  EPX71257.1 140 YKPGMRVLTKLAGFPWWPSMIITEDKMTSVALKSKPKRAEnYHPVIFFPNKEYLWASPDALSPLSEDAISEYLEKPKPKTA--SLIKAYKVAQA 231
                 789********************999999999888887776889*********************************9887..89****99875 PP

  == domain 3  score: -6.3 bits;  conditional E-value: 2
                 S CS
        PWWP  77 k 77 
                 +
  EPX71257.1 355 E 355
                 1 PP

>> Med26  TFIIS helical bundle-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.1   1.3e-06     0.012       6      50 ..     429     479 ..     424     482 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 1.3e-06
                 S---.....HHHHHHSHHHHHHHHH......H-TTS-HHHHHHHHHHHHH.HH CS
       Med26   6 Leklpi.ttetLkstgIGkvVnalr......khkhetaevktlAksLvek.Wk 50 
                 L+ ++  + ++ + t+I +vV++++         + ++++k+ + +L+e  Wk
  EPX71257.1 429 LSTFQGlDASLVQNTKIAVVVKKIYsltdlpA--EQEESIKKICHELLEDkWK 479
                 444443377778************96665431..229**********985598 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (590 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2581  (0.143957); expected 358.6 (0.02)
Passed bias filter:                      628  (0.0350271); expected 358.6 (0.02)
Passed Vit filter:                       332  (0.0185175); expected 17.9 (0.001)
Passed Fwd filter:                       192  (0.0107089); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 3.19u 0.43s 00:00:03.62 Elapsed: 00:00:00.81
# Mc/sec: 2210.35
//
Query:       EPX71258.1  [L=1155]
Description: arginine specific carbamoyl-phosphate synthase Arg4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   2.4e-110  367.0   0.1    2.7e-84  281.9   0.0    2.4  2  CPSase_L_D2      Carbamoyl-phosphate synthase L chain, ATP bi
      8e-40  136.0   0.1    2.2e-39  134.6   0.1    1.8  2  CPSase_L_D3      Carbamoyl-phosphate synthetase large chain, 
    6.3e-19   68.2   0.0    2.3e-08   33.8   0.0    2.3  2  ATP-grasp        ATP-grasp domain
    1.4e-17   63.9   0.5    2.7e-08   33.6   0.0    2.5  2  Dala_Dala_lig_C  D-ala D-ala ligase C-terminus
    7.1e-12   45.2   0.0    0.00011   21.9   0.0    2.9  2  ATPgrasp_Ter     ATP-grasp in the biosynthetic pathway with T
    4.1e-08   33.4   0.1    0.00092   19.3   0.0    2.8  2  ATP-grasp_3      ATP-grasp domain
    1.2e-05   25.0   0.0      0.091   12.4   0.0    2.5  2  RimK             RimK-like ATP-grasp domain
    2.7e-05   24.0   0.9       0.15   11.8   0.0    3.1  3  GARS_A           Phosphoribosylglycinamide synthetase, ATP-gr
    3.1e-05   23.5   0.1      0.024   14.1   0.0    2.6  2  ATP-grasp_5      ATP-grasp domain
     0.0059   16.1   0.0      0.035   13.6   0.0    2.4  1  Epimerase        NAD dependent epimerase/dehydratase family
  ------ inclusion threshold ------
      0.044   13.5   0.0       0.14   11.9   0.0    1.8  1  Collagen_mid     Bacterial collagen, middle region
      0.058   13.3   0.1       0.17   11.8   0.1    1.8  1  Peptidase_M17_N  Cytosol aminopeptidase family, N-terminal do
       0.21   11.5   0.8         19    5.1   0.2    2.8  2  NAD_binding_10   NAD(P)H-binding


Domain annotation for each model (and alignments):
>> CPSase_L_D2  Carbamoyl-phosphate synthase L chain, ATP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  281.9   0.0     2e-87   2.7e-84       1     210 [.     204     407 ..     204     408 .. 0.99
   2 !   82.9   0.1   1.6e-26   2.2e-23       1     207 [.     740     944 ..     740     947 .. 0.92

  Alignments for each domain:
  == domain 1  score: 281.9 bits;  conditional E-value: 2e-87
                  SHHHHHHHHHHTT-BBSSEECSSBSSHHHHHHHHHHH-SSEEEEETTCCTTTTEEEESSHHHHHHHHHHHHHHHHHHHSTS-EEEEE--SSSEEEEEE CS
  CPSase_L_D2   1 DkesakealkkinvpvvpssaapvetleealaiakeigyPviikaafglGGkGmrvarneeelaelvkkalaeakaafgnkqvlvekslkgpkeiEve 98 
                  D++ +++al++i++p+++s+a+  e++++al++a+e+gyPvi+++a++lGG+G+++a+n+eel+ l++++l+ +      +q+lveksl+g+ke+E+e
   EPX71258.1 204 DRDLFSKALNEIDIPIAESTAV--ESVDQALQAASEVGYPVIVRSAYSLGGLGSGFANNKEELQSLAARSLSLT------PQILVEKSLRGWKEVEYE 293
                  99********************..*************************************************9......8***************** PP

                  EEEETTS-EEEEEEEEECCEC..TCCCCEEEES-SS--HHHHHHHHHHHHHHHHHHT-EEEEEEEEEEETTTTEEEEEEEESS--CCHHHHHHHHS-- CS
  CPSase_L_D2  99 vlrDakgnvitvcerenslql..rtqkvievAPsqtLtdeerqalreaavkvvrevgvvgagtveflldpkskeyyviEvNtRlsvesalaekaTGld 194
                  v+rDa++n+itvc++en+++l  +t+++++vAPsqtL+dee+++lr+aa+k++r++gvvg+++v+++l+p+s ey viEvN+Rls++sala+kaTG++
   EPX71258.1 294 VVRDAANNCITVCNMENFDPLgiHTGDSMVVAPSQTLSDEEYHMLRSAAIKIIRHLGVVGECNVQYALSPDSLEYRVIEVNARLSRSSALASKATGYP 391
                  ************************************************************************************************** PP

                  HHHHHHHHHTT--GCG CS
  CPSase_L_D2 195 lvkeaakialgekLee 210
                  l+++aakialg++L+e
   EPX71258.1 392 LAYTAAKIALGHTLPE 407
                  **************97 PP

  == domain 2  score: 82.9 bits;  conditional E-value: 1.6e-26
                  SHHHHHHHHHHTT-BBSSEECSSBSSHHHHHHHHHHH-SSEEEEETTCCTTTTEEEESSHHHHHHHHHHHHHHHHHHHSTS-EEEEE--SSSEEEEEE CS
  CPSase_L_D2   1 DkesakealkkinvpvvpssaapvetleealaiakeigyPviikaafglGGkGmrvarneeelaelvkkalaeakaafgnkqvlvekslkgpkeiEve 98 
                  D+++++++l+k++v+    ++   +++eea  +a+++gyPv++++++ l G  m v+r+e+ l++ +++a a ++    ++ v + k+++g +e++v+
   EPX71258.1 740 DRHKFAQILDKVGVDQPAWKEL--TSVEEASVFANTVGYPVLVRPSYVLSGAAMSVIRDESSLKNKLENAAAVSP----DHPVVITKFIEGARELDVD 831
                  99************98877777..9*************************************************6....9****************** PP

                  EEEETTS-EEEEEEEEECCEC.TCCCCEEEES-SS--HHHHHHHHHHHHHHHHHHT-EEEEEEEEEEET...TTTEEEEEEEESS--CCHHHHHHHHS CS
  CPSase_L_D2  99 vlrDakgnvitvcerenslql.rtqkvievAPsqtLtdeerqalreaavkvvrevgvvgagtveflldp...kskeyyviEvNtRlsvesalaekaTG 192
                   ++ + +  ++  +     +  + ++     P   L+ +  ++ +e a kv+ + +++g  +++ +l +    +++  viE N R s++ +  +ka G
   EPX71258.1 832 AVASKGQLLVHAVSEHVENAGvHSGDATIALPPYSLSTDIMERCKEIAKKVAGAFHITGPYNMQIILAEnadGTSDLKVIECNLRASRSFPFVSKALG 929
                  ***9999999877655554446********************************************987322357899******************** PP

                  --HHHHHHHHHTT-- CS
  CPSase_L_D2 193 ldlvkeaakialgek 207
                  ++ + +a +  +g++
   EPX71258.1 930 VNFIDVATRAIVGQD 944
                  ******999888876 PP

>> CPSase_L_D3  Carbamoyl-phosphate synthetase large chain, oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       8.6   1.2e+04      30      44 ..     428     442 ..     426     452 .. 0.87
   2 !  134.6   0.1   1.6e-42   2.2e-39       2     122 .]     492     614 ..     491     614 .. 0.97

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 8.6
  CPSase_L_D3  30 ltkidpwFLekleel 44 
                  +tki +w L+k++++
   EPX71258.1 428 VTKIPRWDLSKFQHV 442
                  79*********9987 PP

  == domain 2  score: 134.6 bits;  conditional E-value: 1.6e-42
  CPSase_L_D3   2 elkeptdeRifaiaeal.rrglsveeiheltkidpwFLekleelvelekelkkkkk..eldeellreakklGfsDkqiaelleeeeeeevrelrkklg 96 
                  +l+ ptd+R+fa+ ea+ ++++sv++iheltkid+wFL kle+++ + +el++  +   l++e+l++akk+GfsD qi++l++  +e evr+ rk+++
   EPX71258.1 492 SLSVPTDRRFFAVVEAMlNHNYSVDKIHELTKIDKWFLGKLENMAGVYRELQNIGSlyGLNKEILTRAKKHGFSDYQISKLVG-ATEMEVRARRKRYD 588
                  6899*************999*********************************99999***********************87.77788********* PP

  CPSase_L_D3  97 ilpvykrvDtcAaeFeaetpYlYstY 122
                  i+p +k++Dt+AaeF+a+t+YlY+tY
   EPX71258.1 589 IHPWVKKIDTLAAEFPAHTNYLYTTY 614
                  *************************9 PP

>> ATP-grasp  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.0   0.0     6e-11   8.3e-08       2     141 ..     213     357 ..     212     376 .. 0.86
   2 !   33.8   0.0   1.7e-11   2.3e-08       2     149 ..     749     902 ..     748     919 .. 0.86

  Alignments for each domain:
  == domain 1  score: 32.0 bits;  conditional E-value: 6e-11
                 HTTT--B-EEEEECCHHHHHHHHHHH-SCEEEEESSS-CTTTTEEEECTCCGHHCHHHHC..GTTCEEEEE----SEEEEEEEEEETTC-EEE--EEEE CS
   ATP-grasp   2 eklglpvprflaveskeeleeaaeelglpvvvKarrlgydGkGqsvvrseedleqaleal..keekvivEefvpfekElsvlvvrsaeGetafypvvet 98 
                 ++  +p+++ +aves +++ +aa+e+g+pv+v+ +  +  G G+ + +++e+l+++++       +++vE+     kE+   vvr+a  +  ++  +e+
  EPX71258.1 213 NEIDIPIAESTAVESVDQALQAASEVGYPVIVR-SAYSLGGLGSGFANNKEELQSLAARSlsLTPQILVEKSLRGWKEVEYEVVRDAANNCITVCNMEN 310
                 57889****************************.99999***************998877777889*******************99999999999999 PP

                 EEETTEEE...EEEECEE-SCHHH.HHHHHHHHHHHHHHTSSEEEEE CS
   ATP-grasp  99 vqedgilr...lsvapaevsekaq.kkaeeiakkiveeLggvGvfav 141
                     gi     ++vap++  ++++ +  ++ a ki+++Lg+vG   v
  EPX71258.1 311 FDPLGIHTgdsMVVAPSQTLSDEEyHMLRSAAIKIIRHLGVVGECNV 357
                 999998743337899988776655055566666**********7666 PP

  == domain 2  score: 33.8 bits;  conditional E-value: 1.7e-11
                 HTTT--B-EEEEECCHHHHHHHHHHH-SCEEEEESSS-CTTTTEEEECTCCGHHCHHHHC....GTTCEEEEE----SEEEEEEEEEETTC-EEE--EE CS
   ATP-grasp   2 eklglpvprflaveskeeleeaaeelglpvvvKarrlgydGkGqsvvrseedleqaleal....keekvivEefvpfekElsvlvvrsaeGetafypvv 96 
                 +k+g+  p +  ++s ee++ +a+++g+pv+v+ +    +G   sv+r+e++l++ le++     +++v++ +f++  +El v +v + +G+  + +v 
  EPX71258.1 749 DKVGVDQPAWKELTSVEEASVFANTVGYPVLVR-PSYVLSGAAMSVIRDESSLKNKLENAaavsPDHPVVITKFIEGARELDVDAV-ASKGQLLVHAVS 845
                 688999***************************.99999************9999999888888999**************98777.568999999999 PP

                 EEEEETTE....EEEEEECEE-SCHHHHHHHHHHHHHHHHHTSSEEEEEEEEEETTC CS
   ATP-grasp  97 etvqedgi....lrlsvapaevsekaqkkaeeiakkiveeLggvGvfavElFvledg 149
                 e+v++ g+      + + p+++s+++ ++ +eiakk++ ++ + G + + + + e+ 
  EPX71258.1 846 EHVENAGVhsgdATIALPPYSLSTDIMERCKEIAKKVAGAFHITGPYNMQIILAENA 902
                 999976551111678999***************************999998887544 PP

>> Dala_Dala_lig_C  D-ala D-ala ligase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.6   0.0     2e-11   2.7e-08      26     173 ..     229     374 ..     212     376 .. 0.81
   2 !   27.9   0.1   1.1e-09   1.5e-06      16     161 ..     754     898 ..     747     914 .. 0.77

  Alignments for each domain:
  == domain 1  score: 33.6 bits;  conditional E-value: 2e-11
                      HHHHHHHHHC-SSEEEEESSSSTTTTEEEESSGGGHHHHHHHHHTT-SCEEEEE--.ESEEEEEEEEETSSCEEEEEEEEE-SSSSS-HHHHHC CS
  Dala_Dala_lig_C  26 ellekveeelgypvfVKpareGSSvGvskveseeelkeaieeafkydekvlvEeai.egreievavlgneklevsevgeivvkkgfydyeakys 118
                      +   +  +e+gypv+V++a +   +G   ++++eel++  +++++ + ++lvE+ +   +e+e  v+ + ++++ +v ++    + +d    ++
       EPX71258.1 229 DQALQAASEVGYPVIVRSAYSLGGLGSGFANNKEELQSLAARSLSLTPQILVEKSLrGWKEVEYEVVRDAANNCITVCNM----ENFDPLGIHT 318
                      445566899************99*********************************7779********777777666554....3455555566 PP

                      .TT-EEESS----HHHHHHHHHHHHHHHHHTT--SEEEEEEEE.ETTTEEEEEEEE CS
  Dala_Dala_lig_C 119 ddkaqlevpaklekeveekiqelalkaykaldlrGlaRvDffl.teegeivlnEvN 173
                      +d++ +    +l++e+++ ++ +a+k+ + l++ G + v + l  ++ e  + EvN
       EPX71258.1 319 GDSMVVAPSQTLSDEEYHMLRSAAIKIIRHLGVVGECNVQYALsPDSLEYRVIEVN 374
                      677777777889***************************99994444577788888 PP

  == domain 2  score: 27.9 bits;  conditional E-value: 1.1e-09
                      ETTHHCH-H-.HHHHHHHHHC-SSEEEEESSSSTTTTEEEESSGGGHHHHHHHHH..TT-SCEEEEE--.ESEEEEE.EEEETSSCEEEEEEEE CS
  Dala_Dala_lig_C  16 ekeeakeekk.ellekveeelgypvfVKpareGSSvGvskveseeelkeaieeaf..kydekvlvEeai.egreiev.avlgneklevsevgei 104
                      ++ ++ke ++ e  +   +++gypv+V+p+   S   +s ++ e+ lk+ +e+a+  + d+ v++ ++i  +re++v av  +++l v+ v e+
       EPX71258.1 754 DQPAWKELTSvEEASVFANTVGYPVLVRPSYVLSGAAMSVIRDESSLKNKLENAAavSPDHPVVITKFIeGARELDVdAVASKGQLLVHAVSEH 847
                      34444444332333445789*******************************987511679*********889*****6677899********** PP

                      E-SSSSS-HHHHHC.TT-EEESS----HHHHHHHHHHHHHHHHHTT--SEEEEEEEE CS
  Dala_Dala_lig_C 105 vvkkgfydyeakysddkaqlevpaklekeveekiqelalkaykaldlrGlaRvDffl 161
                      v + g+       s+d++    p +l++++ e+ +e+a+k+  a +++G   + ++l
       EPX71258.1 848 VENAGVH------SGDATIALPPYSLSTDIMERCKEIAKKVAGAFHITGPYNMQIIL 898
                      *999886......45666677788888888888888888887777777766666655 PP

>> ATPgrasp_Ter  ATP-grasp in the biosynthetic pathway with Ter operon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   3.6e-07   0.00049      49     120 ..     338     412 ..     326     422 .. 0.79
   2 !   21.9   0.0   8.3e-08   0.00011       4     115 ..     815     947 ..     813     956 .. 0.78

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 3.6e-07
  ATPgrasp_Ter  49 lielaerlaeefgldglvnvQvrededg..pkLLEiNpRasGGlg.ysalaGvnlpylalklllgleteeveepe 120
                   l ++a ++++++g+ g  nvQ+    d   ++++E+N+R s      s ++G  l+y a+k +lg+  +e ++  
    EPX71258.1 338 LRSAAIKIIRHLGVVGECNVQYALSPDSleYRVIEVNARLSRSSAlASKATGYPLAYTAAKIALGHTLPELTNAV 412
                   567899****************999888779*********96555156777**************8555554444 PP

  == domain 2  score: 21.9 bits;  conditional E-value: 8.3e-08
  ATPgrasp_Ter   4 allvmeyLegp.EySvDvlaekgevl.aavpRrKekgglq.............elekdeelielaerlaeefgldglvnvQv....rededg.pkLL 80 
                   ++++++++eg+ E  vD +a kg++l  av    e+ g++             +++  e+  e+a+++a +f+++g +n+Q+      d+   +k++
    EPX71258.1 815 PVVITKFIEGArELDVDAVASKGQLLvHAVSEHVENAGVHsgdatialppyslSTDIMERCKEIAKKVAGAFHITGPYNMQIilaeNADGTSdLKVI 911
                   678899999854999******99987467777777555555667788999966666679999*******************84432233334699** PP

  ATPgrasp_Ter  81 EiNpRasGGlgysala.Gvnlpylalklllgletee 115
                   E N Ras  +     a Gvn++++a +++ g+++++
    EPX71258.1 912 ECNLRASRSFPFVSKAlGVNFIDVATRAIVGQDVPA 947
                   **********9766666************9965444 PP

>> ATP-grasp_3  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.3   0.0   0.00019      0.26      25     159 ..     233     378 ..     203     380 .. 0.72
   2 !   19.3   0.0   6.6e-07   0.00092       1     157 [.     738     916 ..     738     920 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00019
                  EESS--SSSEEEEESS-------B--SS--TTE.............EEEE---S.EEEEEEEEE.SSSEEEEEEEEEEEET....TEEEEEEES---- CS
  ATP-grasp_3  25 eeleeeekklvvKprdGaggesvrvveekeeaeaaieeve......lvqefieG.kplSvsllsdgekvlvlavnrqliekaekefvyaGnvtpiete 115
                  + ++e+ ++++v  +++ gg +  ++++kee+++  +         lv + ++G k++  +++ d+ ++ + ++n +  +  + +   +  v+p++t 
   EPX71258.1 233 QAASEVGYPVIVRSAYSLGGLGSGFANNKEELQSLAARSLsltpqiLVEKSLRGwKEVEYEVVRDAANNCITVCNMENFDPLGIHTGDSMVVAPSQTL 330
                  3345559**********************9999776655579999999*****9789999****9999999999999988644443333334555554 PP

                  H...HHHHHHHHHHHHTTSTT--EEEEEEEEESS...SEEEEEEESS-- CS
  ATP-grasp_3 116 l...keevvelaeevvekleglaGyvGvDlvlkd..eepyviEvNPRlt 159
                       + ++++a +++++l g++G   v   l+    e  viEvN+Rl 
   EPX71258.1 331 SdeeYHMLRSAAIKIIRHL-GVVGECNVQYALSPdsLEYRVIEVNARLS 378
                  4111555677788888888.88888888888876456788*******85 PP

  == domain 2  score: 19.3 bits;  conditional E-value: 6.6e-07
                  HTSHHHHHHHHTTT.S---.........-EESS--.....SSSEEEEESS-------B--SS--TTE...............EEEE---S.EEEEEEE CS
  ATP-grasp_3   1 asdKlktykkLkeagvkvP.....tkleaeeleee.....ekklvvKprdGaggesvrvveekeeaeaaieeve........lvqefieG.kplSvsl 79 
                  a+d  k+++ L++ gv  P     t  + ee++ +      +++ v p++   g +++v++++ ++++++e+ +        ++ +fieG ++l v++
   EPX71258.1 738 AEDRHKFAQILDKVGVDQPawkelT--SVEEAS-VfantvGYPVLVRPSYVLSGAAMSVIRDESSLKNKLENAAavspdhpvVITKFIEGaRELDVDA 832
                  67999**************885332..222222.2456779*****************************99989**************9668***** PP

                  EE.SSSEEEEEEEEEEEET....TEEEEEEE....S----H..HHHHHHHHHHHHTTSTT--EEEEEEEEESS......SEEEEEEESS CS
  ATP-grasp_3  80 lsdgekvlvlavnrqliekaekefvyaGnvt....pietel..keevvelaeevvekleglaGyvGvDlvlkd.....eepyviEvNPR 157
                  ++++ + lv av++ + +      v +G  t    p+  +    e++ e+a++v  ++  + G     ++l++     +++ viE N R
   EPX71258.1 833 VASKGQLLVHAVSEHVENA----GVHSGDATialpPYSLSTdiMERCKEIAKKVAGAF-HITGPYNMQIILAEnadgtSDLKVIECNLR 916
                  **99888888888887776....55666554222255544444677777777777777.888888899998887767778889999977 PP

>> RimK  RimK-like ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.0   0.00035      0.48      13      80 ..     214     282 ..     203     386 .. 0.78
   2 !   12.4   0.0   6.6e-05     0.091       1      98 [.     738     838 ..     738     903 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00035
                 HTT-----EEEESS-S-HHHHHHTT-.-SSEEEEE-TTTT--EEEEE-SHHHHHHHHHH....GGG--EEEE CS
        RimK  13 kakikvpntalardeedaekliekiklrfPvvvKsvegsqGikvvlakkeqklkqvlea....lkeailvqe 80 
                   +i++ +++ +++ ++a +   ++  + Pv+v+s ++  G++  +a+++++l+++  a    l+ +ilv +
  EPX71258.1 214 EIDIPIAESTAVESVDQALQAASEV--GYPVIVRSAYSLGGLGSGFANNKEELQSLA-ArslsLTPQILVEK 282
                 4456666777777778888877777..79**************************94.44777888888765 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 6.6e-05
                 HH-HHHHHHHHHHTT-----EEEESS-S-HHHHHHTT-.-SSEEEEE-TTTT--EEEEE-SHHHHHHHHHH.....GGG--EEEEE--SS-SEEEEEEE CS
        RimK   1 ardKlkslklLakakikvpntalardeedaekliekiklrfPvvvKsvegsqGikvvlakkeqklkqvlea.....lkeailvqeyieeaenediRvlv 94 
                 a+d+ k  ++L k +++ p  +   + e+a+ + + +  + Pv+v+ ++   G  + + ++e +lk+ le       ++ +++ ++ie a + d+  + 
  EPX71258.1 738 AEDRHKFAQILDKVGVDQPAWKELTSVEEASVFANTV--GYPVLVRPSYVLSGAAMSVIRDESSLKNKLENaaavsPDHPVVITKFIEGARELDVDAVA 834
                 68999********************************..6****************************99866655556679*******9999998776 PP

                 ETTE CS
        RimK  95 vdde 98 
                  +++
  EPX71258.1 835 SKGQ 838
                 6666 PP

>> GARS_A  Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1       1.1   1.5e+03      27      69 ..      73     115 ..      54     121 .. 0.77
   2 !    9.2   0.0   0.00071      0.97       6     104 ..     209     300 ..     204     377 .. 0.78
   3 !   11.8   0.0   0.00011      0.15       8     101 ..     746     835 ..     741     918 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 1.1
                 HHHHHHHHHHSSSEEEEEESC-GGGT-EEEESSHHHHHHHHHH CS
      GARS_A  27 eeakeyieeatakalVvKadglaagKgvivakseeealkavke 69 
                  ++k++ +e+ +k++Vv + g++ g+      s ++a+ka++e
  EPX71258.1  73 GHVKAVQREKVNKVIVVGSGGISIGQAGEFDYSGAQAIKALRE 115
                 46677889999999***********999999999999998876 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00071
                 HHHHHHHTT--B--EEEESSHHHHHHHHHHHSSSEEEEEESC-GGGT-EEEESSHHHHHHHHHHHCTS-TTCCCCSSEEEEE---S.EEEEEEEEECTT CS
      GARS_A   6 akdllkkagiptaeyeaftdpeeakeyieeatakalVvKadglaagKgvivakseeealkavkeilekkkfGeagekvviEelleG.eEvsllalvdgk 103
                 +k  l++++ip+ae +a++++++a +  +e++ ++ +v+++   +g g   a+++ee  + ++  l+       + ++++E+ l+G +Ev   ++ d  
  EPX71258.1 209 SK-ALNEIDIPIAESTAVESVDQALQAASEVGYPV-IVRSAYSLGGLGSGFANNKEELQSLAARSLS------LTPQILVEKSLRGwKEVEYEVVRDAA 299
                 44.4689****************************.6666666689999999999999998888885......5789999*999996688888777764 PP

                 E CS
      GARS_A 104 t 104
                 +
  EPX71258.1 300 N 300
                 3 PP

  == domain 3  score: 11.8 bits;  conditional E-value: 0.00011
                 HHHHHTT--B--EEEESSHHHHHHHHHHHSSSEEEEEESC-GGGT-EEEESSHHHHHHHHHHHCTS-TTCCCCSSEEEEE---SE.EEEEEEEEC CS
      GARS_A   8 dllkkagiptaeyeaftdpeeakeyieeatakalVvKadglaagKgvivakseeealkavkeilekkkfGeagekvviEelleGe.Evsllalvd 101
                 ++l+k+g+  + ++++t++eea+ + ++++ ++  v+++ + +g  ++v ++e+       + le+ +  +  + vvi +++eG  E+ + a+  
  EPX71258.1 746 QILDKVGVDQPAWKELTSVEEASVFANTVGYPV-LVRPSYVLSGAAMSVIRDESSLK----NKLENAAAVSPDHPVVITKFIEGArELDVDAVAS 835
                 6899*****************************.99**************9987655....555555567899**********954787777654 PP

>> ATP-grasp_5  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.0   1.7e-05     0.024      17      52 ..     210     245 ..     191     249 .. 0.86
   2 !    6.4   0.0    0.0039       5.3      12      51 ..     741     780 ..     736     814 .. 0.92

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 1.7e-05
  ATP-grasp_5  17 elleaygipvvetrlassaeeaveaaeeigypvvlK 52 
                  + l+ ++ip++e+  ++s+++a++aa+e+gypv ++
   EPX71258.1 210 KALNEIDIPIAESTAVESVDQALQAASEVGYPVIVR 245
                  457889***************************987 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0039
  ATP-grasp_5  12 eaeakelleaygipvvetrlassaeeaveaaeeigypvvl 51 
                   ++ +++l+ +g++ +  +  +s+eea   a+++gypv +
   EPX71258.1 741 RHKFAQILDKVGVDQPAWKELTSVEEASVFANTVGYPVLV 780
                  577899*******************************977 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.0   2.5e-05     0.035      14      92 ..    1030    1104 ..    1028    1112 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 2.5e-05
                  HHHHHHHCTSEEEEEES-STTTTCHHCHHCEEEE--TT-HHHHHHHHHHHT-SEEEE--S---HHHHHHSHHHHHHHHT CS
   Epimerase   14 lvkallekgyevigldrlssasntarledlelveldltdrsalerlfkeeqpdavihlAavggvaassedpadfieknl 92  
                  ++  l++ gy++   d++ s++ +  +  +e++e  + d+ al+++f+++++ +v++lA     +  + d+ +++++n+
  EPX71258.1 1030 IAADLQKLGYKLYSADKEVSKELSPTE--AEVIEFPVDDKRALRAVFEKYNVACVFNLAS--ARGKDIYDKDYVMRRNA 1104
                  67889*************665555544..49***************************65..44455556667777665 PP

>> Collagen_mid  Bacterial collagen, middle region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0    0.0001      0.14      43     111 ..     400     469 ..     393     477 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.0001
  Collagen_mid  43 pvGtTlastgnvvtelgeav..ssagslVsaLgtgplaplapvttpvggvvstvgqavtsagttLttalss 111
                   ++G Tl  ++n+vt++ +a    s+  +V+ +    l++ ++v   vg+ +++vg+  +++g t +++l +
    EPX71258.1 400 ALGHTLPELTNAVTKTTTANfePSLDYIVTKIPRWDLSKFQHVNREVGSSMKSVGEV-MAVGRTFEESLQK 469
                   89************9988862257889****************************85.5677777777765 PP

>> Peptidase_M17_N  Cytosol aminopeptidase family, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   0.00012      0.17      45      95 ..      76     126 ..      47     142 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00012
  Peptidase_M17_N  45 ralsgekakrvllVGLGkeeeltaealrkaagaaaralkgakvttiavalp 95 
                       a++ ek+++v++VG G     +a  +  ++++a++al++++v ti++   
       EPX71258.1  76 KAVQREKVNKVIVVGSGGISIGQAGEFDYSGAQAIKALRESSVHTILINPN 126
                      6788899***************************************99876 PP

>> NAD_binding_10  NAD(P)H-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.2     0.014        19      78     115 ..      71     108 ..      37     124 .. 0.72
   2 ?    3.4   0.0     0.045        62      24      76 ..    1041    1097 ..    1028    1128 .. 0.73

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.014
                     HHHHHHHHHHCT--EEEEEEETTTTSGCGCHHHHHHHH CS
  NAD_binding_10  78 aknivdaakeagvkRfvlvsaigvgdevpgefgewnke 115
                         v+a+++++v+++++v++ g+   ++gef+    +
      EPX71258.1  71 RSGHVKAVQREKVNKVIVVGSGGISIGQAGEFDYSGAQ 108
                     455699*****************998777777655444 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.045
                      EEETTHHHCHHHHCTTTCEEEE--TT-CCHHHHHHTT-S.E.EEES---TCC...HHH CS
  NAD_binding_10   24 alvRnpeklaeleaeeglevvegdvtdvedlaealkgad.a.Vvsalggggk...dee 76  
                      ++  ++e  +el+   ++ev+e  v d+ +l+++++ ++ a V+  ++++gk   d++
      EPX71258.1 1041 LYSADKEVSKELS-PTEAEVIEFPVDDKRALRAVFEKYNvAcVFNLASARGKdiyDKD 1097
                      5556677777775.799*******************9995435555566666666333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1155 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       514  (0.0286686); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.92u 0.33s 00:00:01.25 Elapsed: 00:00:00.57
# Mc/sec: 6087.02
//
Query:       EPX71259.1  [L=395]
Description: acetyl-CoA C-acetyltransferase Erg10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.1e-92  308.6   1.8    3.1e-92  308.6   1.8    1.8  2  Thiolase_N     Thiolase, N-terminal domain
    3.4e-40  136.5   2.2    1.5e-39  134.4   0.2    2.6  3  Thiolase_C     Thiolase, C-terminal domain
    0.00023   20.8   0.9    0.00023   20.8   0.9    2.8  3  ketoacyl-synt  Beta-ketoacyl synthase, N-terminal domain
  ------ inclusion threshold ------
      0.029   14.2   1.5       0.67    9.9   0.1    2.7  2  ACP_syn_III    3-Oxoacyl-[acyl-carrier-protein (ACP)] synthas


Domain annotation for each model (and alignments):
>> Thiolase_N  Thiolase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  308.6   1.8     7e-96   3.1e-92       1     258 [.       6     263 ..       6     265 .. 0.97
   2 ?   -0.6   0.0      0.15   6.7e+02      30      48 ..     298     316 ..     295     379 .. 0.56

  Alignments for each domain:
  == domain 1  score: 308.6 bits;  conditional E-value: 7e-96
                 EEEEEEEEE--EETTSTTTTS-HHHHHHHHHHHHHHHHTS-GGGCCEEEEEHSSCTTSTSCHHHHHHHHTTS-TTSEEEEEEHGGGHHHHHHHHHHHHH CS
  Thiolase_N   1 vvivsaartpigkfggslkdlsaeeLlaealkallekagvdpeevdevivGnvlqagegqniarqaalkagipeevpavtvnkvcsSglkavalaaqsi 99 
                 v+ivsa+rtp+g+fggsl++l+a++L++ a+k++leka++++++v+ev++Gnvl+a+ gqn+arq al ag+  +++++tvnkvc+Sg+ka +l++q i
  EPX71259.1   6 VYIVSAVRTPMGSFGGSLASLPATKLGSVAIKGALEKAKIQASDVQEVFMGNVLSANLGQNPARQCALGAGLKVDTVCTTVNKVCASGMKAAILGTQTI 104
                 89************************************************************************************************* PP

                 HTTSHSEEEEEEEEESTTS-EEETCTTTTGGSSSSEEEEEHHHHHHTEETTTTSEHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHTTTTTTTBE CS
  Thiolase_N 100 aageadvvvagGvEsmsnaptaestdvrsglklgdekakdllipdgladafneehmGltaenlakkykisReeqdefAvkshqkaaaaqkagkFkdeiv 198
                 ++g+ad+vv+gG+Esmsnap++++ ++r g k+g+ +++d l++dgl da+++  mG +ae +a+++ki+R +qdefA++s+++a+aaq++ +F++ei+
  EPX71259.1 105 MTGNADIVVVGGTESMSNAPYYAT-KSRFGSKFGNVELVDGLLRDGLSDAYDGLPMGNAAELCAEEHKIDRAAQDEFAISSYKRAQAAQSSSAFENEII 202
                 **********************97.99************************************************************************ PP

                 -EEEEESSSE.E.EE-S-TTS-TT--HHHHHTS-BSSSTTSS-BTTSB--BEEEEEEEEEEE CS
  Thiolase_N 199 Pvkvkgkkgk.k.tvdkdeairsevtaekLaklkpaFkkeGtvtAgnasqisDGaaavllms 258
                 Pv+v g +gk + ++++d++++ +++ +kL++ +p+Fk +GtvtA+nas+++DGa+a++l+s
  EPX71259.1 203 PVEVFGGRGKpNkVISEDDEPK-NLNEDKLRSTRPVFKGDGTVTAANASSLNDGASAMVLVS 263
                 **********962556666555.5************************************97 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.15
                 HHHHHHHHHTS-GGGCCEE CS
  Thiolase_N  30 alkallekagvdpeevdev 48 
                 a+ ++l++a+v++++vd+ 
  EPX71259.1 298 AIPKALKHANVESSQVDYY 316
                 5666777777777777754 PP

>> Thiolase_C  Thiolase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.1     0.082   3.7e+02      26      44 ..      34      52 ..      22      66 .. 0.73
   2 ?   -3.4   0.0       1.6     7e+03      17      30 ..     117     130 ..     109     137 .. 0.77
   3 !  134.4   0.2   3.5e-43   1.5e-39       2     123 .]     273     394 ..     272     394 .. 0.99

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.082
                HHHHHHHHHHT--GGGESE CS
  Thiolase_C 26 yaikkvlkkagltvedidl 44
                 aik +l+ka ++ +d++ 
  EPX71259.1 34 VAIKGALEKAKIQASDVQE 52
                5788888888888888754 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 1.6
                 GGGGGGHHHHHHHH CS
  Thiolase_C  17 peilglgPayaikk 30 
                  e +  +P ya+k 
  EPX71259.1 117 TESMSNAPYYATKS 130
                 46799999999985 PP

  == domain 3  score: 134.4 bits;  conditional E-value: 3.5e-43
                 --SEEEEEEEEEE--GGGGGGHHHHHHHHHHHHHT--GGGESEEEE--SBHHHHHHHHHHHT--GGGBSTT--HHHH-B-TTTHHHHHHHHHHHHHHHC CS
  Thiolase_C   2 kplakirsyaevgvdpeilglgPayaikkvlkkagltvedidlfEinEAFaaqaLavakaldldlekvNvnGGaialGHPlGasGaRivvtllselkke 100
                 +plak+  + e++++pe ++++P  ai+k+lk+a ++ +++d++EinEAF+++ +a++k l+l++e vN+ GG +++GHPlG sG+Ri+vtl + l ++
  EPX71259.1 273 QPLAKVLGWGEAAQTPERFTTSPSLAIPKALKHANVESSQVDYYEINEAFSVVGVANTKILGLNPENVNIFGGGVSMGHPLGSSGSRIIVTLSNVLAQK 371
                 89************************************************************************************************* PP

                 TTSEEEEEEEETTTEEEEEEEEE CS
  Thiolase_C 101 ggklgvaalCigggqgvalviek 123
                 ++k+gvaa+C+ggg +++ vie+
  EPX71259.1 372 NAKIGVAAVCNGGGGASSFVIER 394
                 ********************986 PP

>> ketoacyl-synt  Beta-ketoacyl synthase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0     0.046   2.1e+02      87     126 ..      27      66 ..      22      78 .. 0.84
   2 !   20.8   0.9   5.1e-08   0.00023     169     211 ..      84     126 ..      73     135 .. 0.84
   3 ?   -1.4   0.2       0.3   1.4e+03     170     191 ..     243     263 ..     241     268 .. 0.61

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.046
                    HHHHHHHHHHHHHHHHHTS-HHTCTTGGEEEEEEESSTHH CS
  ketoacyl-synt  87 pqqrllleaawealedagltpeeldgsrvgvfiGvgagdy 126
                    p+++l  +a + ale+a++++ ++++  +g+++ ++ g++
     EPX71259.1  27 PATKLGSVAIKGALEKAKIQASDVQEVFMGNVLSANLGQN 66 
                    6778899999***********9999988999998888866 PP

  == domain 2  score: 20.8 bits;  conditional E-value: 5.1e-08
                    EEEESGGGHHHHHHHHHHHHHHTTS-SEEEEEEEE---SHHHH CS
  ketoacyl-synt 169 vtvdtACsSslvavhaavqslrsgeadvalaGGvellltpeav 211
                     tv   C+S+ +a  +  q +++g+ad++++GG+e + ++  +
     EPX71259.1  84 TTVNKVCASGMKAAILGTQTIMTGNADIVVVGGTESMSNAPYY 126
                    678889****99999999*****************98876555 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 0.3
                    EEESGGGHHHHHHHHHHHHHHT CS
  ketoacyl-synt 170 tvdtACsSslvavhaavqslrs 191
                    tv++A +Ssl  ++ a + l+s
     EPX71259.1 243 TVTAANASSLNDGASA-MVLVS 263
                    5777777777666655.44444 PP

>> ACP_syn_III  3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.1   0.00015      0.67       3      39 ..      86     122 ..      84     133 .. 0.93
   2 ?    2.6   0.1     0.027   1.2e+02      51      64 ..     251     264 ..     216     273 .. 0.86

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00015
                  EE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG CS
  ACP_syn_III   3 lnaaCsgfvyalsvAdaliesgaakrvLvigaetlsk 39 
                  +n++C++ + a  + ++ i +g+a  v+v g+e +s+
   EPX71259.1  86 VNKVCASGMKAAILGTQTIMTGNADIVVVGGTESMSN 122
                  799********************************97 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.027
                  TB-EEEEEEEEEEE CS
  ACP_syn_III  51 lfGDGAgAvvleas 64 
                   + DGA A+vl  +
   EPX71259.1 251 SLNDGASAMVLVSG 264
                  578*******9776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (395 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       430  (0.0239835); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.28s 00:00:00.80 Elapsed: 00:00:00.45
# Mc/sec: 2656.16
//
Query:       EPX71260.1  [L=979]
Description: GTPase Cwf10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.7e-42  142.9   0.0    1.5e-41  142.0   0.0    1.5  1  GTP_EFTU     Elongation factor Tu GTP binding domain
    3.4e-34  118.1   6.5    5.5e-34  117.4   6.5    1.4  1  EFTUD2       116 kDa U5 small nuclear ribonucleoprotein compo
    4.9e-24   84.4   0.0    9.4e-24   83.5   0.0    1.5  1  EFG_IV       Elongation factor G, domain IV
    3.7e-22   78.2   0.0    9.4e-22   76.9   0.0    1.8  1  EFG_C        Elongation factor G C-terminus
    1.7e-10   41.2   0.0    4.3e-10   39.8   0.0    1.8  1  GTP_EFTU_D2  Elongation factor Tu domain 2
    0.00059   19.9   0.0     0.0018   18.3   0.0    1.8  1  EFG_II       Elongation Factor G, domain II
     0.0024   17.3   0.0     0.0084   15.6   0.0    1.9  1  SRPRB        Signal recognition particle receptor beta subuni
     0.0096   16.0   0.0      0.021   14.9   0.0    1.6  1  MMR_HSR1     50S ribosome-binding GTPase
  ------ inclusion threshold ------
      0.032   13.8   0.0      0.077   12.6   0.0    1.6  1  Ras          Ras family


Domain annotation for each model (and alignments):
>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.0   0.0   7.8e-45   1.5e-41       2     174 ..     139     322 ..     138     448 .. 0.75

  Alignments for each domain:
  == domain 1  score: 142.0 bits;  conditional E-value: 7.8e-45
                 CEEEEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHHHHHSTHCHSHHHHHHTSCSSCEEEEEE...TTCSSEEEEEEEESSSGGGHHHHHHHHHT-SEE CS
    GTP_EFTU   2 rirnigiighvDhGKtTLtdrLlyktgaiskkgekaeeervlDtlkeErergiTiksaaisle...ketkkylinliDtPGHvdFskevirglrvlDga 97 
                 ++r+++i+gh++hGKt L+d L+y+t+  +k+ ++++  r++Dt+  Er+r ++iks+  +l     ++k+y ++++DtPGHvdF++e+   ++v+Dg+
  EPX71260.1 139 DVRTFIIAGHLHHGKTALLDLLVYYTHPGTKSPKRRS-LRYTDTHYLERQRVMSIKSTPLTLAvqnMQGKSYAFQCLDTPGHVDFVDEIASPMAVADGV 236
                 5899************************999777665.899*********************99755******************************** PP

                 EEEEETTTBSTHHHHHHHHHHHHTTTEEEEEEESCGSTHHHHHHHHHHHHHHHHHH.....................HHHHHHHHHTTTTTEEEEEEB CS
    GTP_EFTU  98 vlvvdaveGvepqteevlrlalkegvpiivfiNKmDrlkaelkeiveevkqklsrk.....................eeklekygekgekevpvvfgS 174
                 v+vvd+ eGv+ +t + +++a+ +++pi++++NK+Drl  el+  ++++++kl+++                     e              +v+f+S
  EPX71260.1 237 VIVVDVIEGVMINTTRAIKHAIIHDMPIVLVLNKVDRLVLELRLPPNDAYHKLRHVidevndsicqistnakhrvspE------------LGNVCFAS 322
                 **************************************8888888888888886555555444444444333333330............33344444 PP

>> EFTUD2  116 kDa U5 small nuclear ribonucleoprotein component N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.4   6.5   2.8e-37   5.5e-34       1     122 []       3     121 ..       3     121 .. 0.74

  Alignments for each domain:
  == domain 1  score: 117.4 bits;  conditional E-value: 2.8e-37
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX............XXXXXXXXXXXXXX----TTT---S--TTTTT-SSSEEEE--S-SS CS
      EFTUD2   1 ddlYDEFGNyiGpelesdeeeeseeeeeeeeeeeeeeeeeeeaekaeedeelkdeeeeeeaeeeesnavvlhedkkyypsaeevYGkdvetlvqeeDaq 99 
                 +dlYDEFGNyiGpe+e++ e ++  +  + + ++ +  e+e +e+  ed e  ++++   + +e++navvlhedk+yypsaeevYG++v+++vqe+D+q
  EPX71260.1   3 EDLYDEFGNYIGPENEDE-ELDEIPQVPSPSVAQVPGFEAEMEEEDLEDVERVEKMA--LNLAEPQNAVVLHEDKQYYPSAEEVYGPEVDVVVQEQDTQ 98 
                 69***********99765.43344444444444444444442233333333333333..334569********************************** PP

                 -TTS-SS--------B---SS-- CS
      EFTUD2 100 plsePiiaPvkekkfeveekdlp 122
                 pl++Pii+P+++k++++e++++p
  EPX71260.1  99 PLTQPIIDPIRQKRVAIETSNVP 121
                 ******************99876 PP

>> EFG_IV  Elongation factor G, domain IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.5   0.0   4.7e-27   9.4e-24       9     121 .]     716     833 ..     712     833 .. 0.93

  Alignments for each domain:
  == domain 1  score: 83.5 bits;  conditional E-value: 4.7e-27
                 .SS-CCHCCCCCCCHTSSSHCCCCCEEEECCTTTTSSEEEEE--S....TCCCHCCCCHHHHCCCCCCTTS-TTTS--EESEEEEEEEEE--T..TTC- CS
      EFG_IV   9 irkpvkereeklkkqsggdgqyakvileiePleegsgnefvdetk....ggqvpkeyieavekGfqealkeGplagepvtdvkvtLldgslhe..vdss 101
                 i++p+k+++e++++++++d  +++ +++++P++ +++n+++d+t     +++ + +++e +++Gfq+ ++eGpl++e++++ +++++d++l +  ++++
  EPX71260.1 716 INWPQKQISEYFQREYDWDLLASRSVWAFGPDD-RGTNILRDDTLemdvDKKTLGQVKEFIKQGFQWGTREGPLCDETIRNANFRIMDAVLAQepIYRG 813
                 569****************************98.99********95555667777899***************************************** PP

                 HHHHHHHHCHHHHHHHHCC- CS
      EFG_IV 102 eaafkpaarralkeallkAs 121
                 +++++p+arr++++++l+As
  EPX71260.1 814 GGQIIPVARRVCYSSFLTAS 833
                 *****************995 PP

>> EFG_C  Elongation factor G C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.9   0.0   4.7e-25   9.4e-22       1      88 [.     835     923 ..     835     924 .. 0.98

  Alignments for each domain:
  == domain 1  score: 76.9 bits;  conditional E-value: 4.7e-25
                 EEEEEEEEEEEEEECCCCCCHHHHHHHCT-EEEEEEEE..TTEEEEEEEEEGGG-TTHHHCHHHCTTTS-EEEEEEEEEEE--HHHHHH CS
       EFG_C   1 vllEPivkveievpeeyvgkvisdlssrrGeiedmeqd.asgrviieaeiPlaeligfateLrslTkGegsfsmefsgYeevpgdklde 88 
                 +l+EP+++ve+++p +++  ++++l +rrG++++  ++ +s    i+a iP+ ++ gf+t+Lr  T+G+++++  f+++e vpgd+ld+
  EPX71260.1 835 RLMEPVYTVEVHTPADCLPVIYDLLMRRRGHVLQDVPRpGSPLYLIKALIPVIDSCGFETDLRVHTQGQAMCQQVFDHWEIVPGDPLDK 923
                 59************************************99*********************************************9986 PP

>> GTP_EFTU_D2  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.8   0.0   2.2e-13   4.3e-10       2      73 ..     499     574 ..     498     575 .. 0.97

  Alignments for each domain:
  == domain 1  score: 39.8 bits;  conditional E-value: 2.2e-13
                  EEEEEEEEESEEETTEEEEEEC.TCTTSEE...EEEEEEEEEEETEEESEEETTSEEEEEEEESSCCSGSSTTCEE CS
  GTP_EFTU_D2   2 tvalgrvysGtlkkGdevrilg.ndtskke...ivtrissletfhededeavaganaGvivaikgledaiivGdtl 73 
                  ++al+r+y G+++kG++v +lg n++ ++e    +  i  +  + +++++++++a aG +v++ g++++i +++t+
   EPX71260.1 499 FYALARIYAGKVRKGQKVQVLGeNYSIEDEedmAKAYIEEICLPGGRYRIPIEEATAGMLVLLAGVDNSISKTATI 574
                  5799*********************************************************************998 PP

>> EFG_II  Elongation Factor G, domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0   8.9e-07    0.0018       2      64 ..     593     654 ..     592     664 .. 0.91

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 8.9e-07
      EFG_II   2 PePvislaiepkskadedklskaLarlleEDptlrverdeeTketilsGmGelHleivverlk 64 
                 +e+v+++a+ep + ++  k+ + L+++ +  p l +++ ee++e  + G  el ++ ++  l+
  EPX71260.1 593 SESVFKVAVEPYNPSELPKMLDGLRKINKSYP-LAITKVEESGEHTIFGTAELYMDCLLYDLR 654
                 799************************99977.99********************99988776 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   4.2e-06    0.0084       3      84 ..     140     241 ..     138     251 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 4.2e-06
                 --EEEEE-STTSSHHHHHHHHHHS....................S---B---S.S-EEETTG...GGTT..-SEEEETT-GCCSHHHHHHHHHHGGEEE CS
       SRPRB   3 kpavllvGlsdsGKTslftrLttd....................svkktvtSq.essaalkvksekgsk..ltliDfPGheklrqklleklkaksslkg 78 
                  ++++++G  + GKT+l+ +L                         ++ v+S+  + ++l v++ +g++  ++ +D PGh+ +  ++       + + g
  EPX71260.1 140 VRTFIIAGHLHHGKTALLDLLVYYthpgtkspkrrslrytdthyLERQRVMSIkSTPLTLAVQNMQGKSyaFQCLDTPGHVDFVDEIASP---MAVADG 235
                 589******************977779999*******99998877788899*97677888888877765227789********9999988...555667 PP

                 EEEEEE CS
       SRPRB  79 lvfvvD 84 
                 +v vvD
  EPX71260.1 236 VVIVVD 241
                 777777 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   1.1e-05     0.021       3     114 .]     144     270 ..     142     270 .. 0.68

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.1e-05
                 EEEESTTSSHHHHHHHHH..........T............STEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHHHHHHHHHHHHC.TSE CS
    MMR_HSR1   3 aivGrpNvGKStLinalt..........g............ekaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseekglgkaflalee.adl 78 
                 +i+G+   GK+ L+  l+          +            e+ +v +++ t ++    +++ k   ++ +DtpG ++       + +++++    ad 
  EPX71260.1 144 IIAGHLHHGKTALLDLLVyythpgtkspKrrslrytdthylERQRVMSIKSTPLTLAVQNMQGKSYAFQCLDTPGHVD-------FVDEIASPMAvADG 235
                 7899999999999999996666655544045555555555557788888888777777777755689********655.......667777644448** PP

                 EEEEEETTTTCSHHHHHHHHHHHHHTTSEEEEEEES CS
    MMR_HSR1  79 illvvdaseeklkpldeeleelleeakkplilvlnk 114
                 +++vvd+  e++  +  +  +    ++ p++lvlnk
  EPX71260.1 236 VVIVVDVI-EGVMINTTRAIKHAIIHDMPIVLVLNK 270
                 ******76.44433333333332337889*****98 PP

>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   3.9e-05     0.077      39     115 ..     200     272 ..     175     325 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 3.9e-05
                 EEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHHHSTTTSEEEEEEETTT CS
         Ras  39 keievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeikrvaeenvpivLvGnKvD 115
                 +  +++gk++ ++ +DT G  +f     + +  a+g+++v d+ +    ++ +     ik+   +++pivLv nKvD
  EPX71260.1 200 AVQNMQGKSYAFQCLDTPGHVDFVDEIASPMAVADGVVIVVDVIEGVMINTTR----AIKHAIIHDMPIVLVLNKVD 272
                 3446679*****************99999**************9987766655....56666666789********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (979 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       510  (0.0284455); expected 358.6 (0.02)
Passed bias filter:                      470  (0.0262145); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.74u 0.32s 00:00:01.06 Elapsed: 00:00:00.49
# Mc/sec: 5992.02
//
Query:       EPX71261.1  [L=455]
Description: hypothetical protein SOCG_01480 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.17   11.9   0.0       0.26   11.3   0.0    1.2  1  Rad10     Binding domain of DNA repair protein Ercc1 (rad10/S


Domain annotation for each model (and alignments):
>> Rad10  Binding domain of DNA repair protein Ercc1 (rad10/Swi10)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   1.5e-05      0.26      54     107 ..     400     450 ..     388     455 .] 0.75

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 1.5e-05
       Rad10  54 ieerlkklk.kkyklrvlLvlvDvedseevlkeLnkicilndltlllawsaeeaa 107
                 i+   ++ k k+ +  vlLv+vD++  +++l++Lnk+c ++   l+ a+s+   a
  EPX71261.1 400 INGHTSTYKsKSTDSSVLLVVVDSS--SSSLTSLNKFCGVK--LLVSAFSFASLA 450
                 555566666677999********85..678********984..567788877666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (455 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1632  (0.0910257); expected 358.6 (0.02)
Passed bias filter:                      504  (0.0281109); expected 358.6 (0.02)
Passed Vit filter:                       318  (0.0177366); expected 17.9 (0.001)
Passed Fwd filter:                       101  (0.00563333); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 2.52u 0.41s 00:00:02.93 Elapsed: 00:00:00.76
# Mc/sec: 1800.64
//
Query:       EPX71262.1  [L=217]
Description: vacuolar sorting protein Vps20 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-26   93.4   6.6    1.4e-26   93.2   6.6    1.0  1  Snf7      Snf7
  ------ inclusion threshold ------
        1.1    9.4   3.9        8.3    6.5   0.3    2.8  2  HJURP_C   Holliday junction regulator protein family C-termin


Domain annotation for each model (and alignments):
>> Snf7  Snf7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.2   6.6   1.5e-30   1.4e-26       2     172 ..      14     185 ..      13     186 .. 0.95

  Alignments for each domain:
  == domain 1  score: 93.2 bits;  conditional E-value: 1.5e-30
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
        Snf7   2 airsLrkaerkldkkqeslekkikkleaelkklakkgnkdralllLKqkkryekqldqldnqlanleqvslaienlksnkevlnamkqgakamkamnkk 100
                 +i++++++++kl ++ ++le+ ++ + + ++k+ +++n++ al++L  kk y  +++q ++ql n+eq + +ie++  +++vl ++++g +++++ +k+
  EPX71262.1  14 SILNIKEQRDKLMRYHKRLERIEQLEINLARKCLADNNRKGALKALSAKKFYSGLIEQSYGQLGNIEQLLSSIEFTLIQQDVLFGLQEGSNILQQLQKQ 112
                 7899*********************************************************************************************** PP

                 TCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTT-GGTTHHHHHHHHHHHHHHHHHCSH.....HHHHHHHTXXXST CS
        Snf7 101 vdidkidklmdeiedqmekaeeisEalsrslddadeedEeeleaeLdaLeqelgdeell....desvklpevPsee 172
                 + ++ idk+  +  ++ ++ +e++ +l+  +   +  +E+e++aeLd L qe +++  +    + +  lp vP+++
  EPX71262.1 113 MPLERIDKICNDNDEAFQYVDEVNVILQGRM---SRDQEDEIQAELDTLIQERENDPNKnqvdERQIFLPTVPQTK 185
                 *******************************...89****************888776688888888899999876 PP

>> HJURP_C  Holliday junction regulator protein family C-terminal repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.3     0.011        97      27      39 ..      18      30 ..      16      39 .. 0.89
   2 ?    6.5   0.3   0.00093       8.3      22      44 ..     146     168 ..     133     196 .. 0.73

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.011
     HJURP_C 27 IkeeFDkLhqkyc 39
                Ike+ DkL++ ++
  EPX71262.1 18 IKEQRDKLMRYHK 30
                9*********987 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.00093
     HJURP_C  22 nkYreIkeeFDkLhqkyclsspk 44 
                 +  +eI+ e D L+q+   ++ k
  EPX71262.1 146 DQEDEIQAELDTLIQERENDPNK 168
                 4558***********98777743 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       837  (0.0466841); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1575.33
//
Query:       EPX71263.1  [L=297]
Description: COPII-coated vesicle component Sec13 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.3e-20   73.3  15.2    0.00076   20.3   0.6    6.7  6  WD40         WD domain, G-beta repeat
    8.9e-11   41.9   1.4     0.0019   18.5   0.0    3.5  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
  ------ inclusion threshold ------
      0.067   12.1   1.4         11    4.9   0.0    3.8  4  Ge1_WD40     WD40 region of Ge1, enhancer of mRNA-decapping p
       0.52    8.2   5.5       0.93    7.4   1.6    2.1  2  IKI3         IKI3 family


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.0   0.00053       2.4      20      37 ..      19      36 ..       4      37 .. 0.84
   2 !   20.3   0.6   1.7e-07   0.00076       3      37 ..      45      82 ..      41      83 .. 0.80
   3 !   14.6   0.0     1e-05     0.046       2      35 ..      90     126 ..      89     127 .. 0.84
   4 !   12.6   0.0   4.3e-05      0.19       5      37 ..     139     186 ..     136     186 .. 0.89
   5 !   13.1   0.5     3e-05      0.13       6      37 ..     200     236 ..     195     237 .. 0.79
   6 !    8.3   0.0     0.001       4.5      13      37 ..     257     282 ..     246     283 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00053
                TTSSEEEEEETTSEEEEE CS
        WD40 20 pdgawlasGsdDgtvriW 37
                 +g+ la++s D+t++++
  EPX71263.1 19 YYGKRLATCSSDHTIKVF 36
                578889*9988*****97 PP

  == domain 2  score: 20.3 bits;  conditional E-value: 1.7e-07
                EEEEEESS.SSEEEEE..EETTSSEEEEEETTSEEEEE CS
        WD40  3 clrtltGH.ssvtsla..fspdgawlasGsdDgtvriW 37
                +l +l GH ++v+ l+   ++ g+ las+s+Dg+v +W
  EPX71263.1 45 LLDVLHGHtGPVWQLDwaHPKFGTILASASYDGHVIVW 82
                567899**888****55555555559************ PP

  == domain 3  score: 14.6 bits;  conditional E-value: 1e-05
                 EEEEEEESS.SSEEEEE..EETTSSEEEEEETTSEEE CS
        WD40   2 qclrtltGH.ssvtsla..fspdgawlasGsdDgtvr 35 
                 ++l  +++H  sv++++   + +ga+la++s Dg+v 
  EPX71263.1  90 RQLIDYSAHqASVNAVSwaPHEYGALLACASSDGKVS 126
                 567789***888****9889999999998877**996 PP

  == domain 4  score: 12.6 bits;  conditional E-value: 4.3e-05
                 EEEESS.SSEEEEEEETTSSE..............EEEEETTSEEEEE CS
        WD40   5 rtltGH.ssvtslafspdgaw..............lasGsdDgtvriW 37 
                 r +++H s+ +++++sp +                las++ D+ v+iW
  EPX71263.1 139 RMFSTHeSGCNAVCWSPPSLSgsivgqspaagpkkLASAGCDNLVKIW 186
                 67999*999*****99999999999999*999999887655******* PP

  == domain 5  score: 13.1 bits;  conditional E-value: 3e-05
                 EEESS.SSEEEEEEETTSSE....EEEEETTSEEEEE CS
        WD40   6 tltGH.ssvtslafspdgaw....lasGsdDgtvriW 37 
                 tltGH ++ +++a+ p+  +    las+s D++v iW
  EPX71263.1 200 TLTGHvDWTRDVAWAPSVGLtktyLASASQDKNVFIW 236
                 899**6665899655555558888************* PP

  == domain 6  score: 8.3 bits;  conditional E-value: 0.001
                 E.EEEEEETTSSEEE.EEETTSEEEEE CS
        WD40  13 v.tslafspdgawla.sGsdDgtvriW 37 
                 v + +++s +g+ la s++ D++v+++
  EPX71263.1 257 VaWRVSWSLSGNILAvSCG-DNKVYLF 282
                 668899*******985788.****987 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0     0.012        55      49      89 ..      20      61 ..       5      64 .. 0.73
   2 !    7.3   0.2    0.0013       5.7      10      70 ..      24      87 ..      22      99 .. 0.78
   3 !   18.5   0.0   4.2e-07    0.0019       9      70 ..      69     133 ..      67     154 .. 0.82
   4 !   16.4   0.1   1.9e-06    0.0085      11      71 ..     225     288 ..     211     294 .. 0.71

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.012
  ANAPC4_WD40 49 dgklLavaysdgevrlldaesgk.vvhslsvksekavtclgW 89
                  gk La   sd ++++++ e+ + ++  +  +++  v  l+W
   EPX71263.1 20 YGKRLATCSSDHTIKVFSLENNQqTLLDVLHGHTGPVWQLDW 61
                 5999*************9997641444444444445777777 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0013
  ANAPC4_WD40 10 iAlatedgellvfRl..ngqrvwtleedkedsevrsLaWkpd..gklLavaysdgevrlldaesg 70
                 +A  ++d  + vf l  n q + ++  +++ + v +L W +   g++La a  dg+v +    +g
   EPX71263.1 24 LATCSSDHTIKVFSLenNQQTLLDV-LHGHTGPVWQLDWAHPkfGTILASASYDGHVIVWREVDG 87
                 5777888999999886566778888.789999*******863349***********987766555 PP

  == domain 3  score: 18.5 bits;  conditional E-value: 4.2e-07
  ANAPC4_WD40   9 LiAlatedgellvfRlngqrvwtl..eedkedsevrsLaWkpd..gklLavaysdgevrlldaesg 70 
                  ++A a+ dg+++v R +   vw    + ++++ +v++++W p   g lLa a sdg+v++l+ ++ 
   EPX71263.1  69 ILASASYDGHVIVWR-EVDGVWRQliDYSAHQASVNAVSWAPHeyGALLACASSDGKVSVLEFKDD 133
                  6899999******99.5677887777779***********8764489*************998764 PP

  == domain 4  score: 16.4 bits;  conditional E-value: 1.9e-06
  ANAPC4_WD40  11 AlatedgellvfRlngqrvwtl...eedkedsevrsLaWkpdgklLavaysdgevrlldaesgk 71 
                  A a++d+++ +   +g   w+    +e+k       ++W+ +g++Lav++ d++v l++  ++k
   EPX71263.1 225 ASASQDKNVFIWTKEGDGPWQKtplTEEKFPDVAWRVSWSLSGNILAVSCGDNKVYLFKETNKK 288
                  56666666666666666666665533333333345899*******************9988876 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0    0.0024        11     184     228 ..       6      50 ..       1      56 [. 0.78
   2 ?    1.3   0.0      0.03   1.4e+02     199     214 ..      67      82 ..      59     113 .. 0.86
   3 ?    0.0   0.0     0.073   3.3e+02     114     153 ..     201     240 ..     183     254 .. 0.83
   4 ?   -1.5   0.0      0.21   9.5e+02     194     215 ..     262     283 ..     257     288 .. 0.83

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.0024
    Ge1_WD40 184 ieehsliveaafspdGtalatasedGevkffqvyledeeeprCLh 228
                  +++ ++ +a++   G  lat+s+d ++k f +  ++++    Lh
  EPX71263.1   6 SQHDDMMHDAMLDYYGKRLATCSSDHTIKVFSLENNQQTLLDVLH 50 
                 455568999********************9988766665555555 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.03
    Ge1_WD40 199 GtalatasedGevkff 214
                 Gt la as dG v  +
  EPX71263.1  67 GTILASASYDGHVIVW 82 
                 99*********99776 PP

  == domain 3  score: 0.0 bits;  conditional E-value: 0.073
    Ge1_WD40 114 ietvvsesdrviWCPyipeedaeesdddeaskllvltrgd 153
                  + +v  ++ v W P +  +++   ++ + ++++++t++ 
  EPX71263.1 201 LTGHVDWTRDVAWAPSVGLTKTYLASASQDKNVFIWTKEG 240
                 5567777889999999999998888888899999999875 PP

  == domain 4  score: -1.5 bits;  conditional E-value: 0.21
    Ge1_WD40 194 afspdGtalatasedGevkffq 215
                 ++s  G  la+++ d +v +f+
  EPX71263.1 262 SWSLSGNILAVSCGDNKVYLFK 283
                 567889999****999998775 PP

>> IKI3  IKI3 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.1    0.0049        22     305     380 ..      54     132 ..      37     156 .. 0.66
   2 ?    7.4   1.6   0.00021      0.93     308     343 ..     259     295 ..     181     296 .. 0.88

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.0049
                 XXXXXXXXXXX..XXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXX...XX.XXXXXX.XXXXXXXXXX.XXXXXXXXXX CS
        IKI3 305 eevqsLaWsad..SevLavrledr.vqlwtisNyhWYLKqelrysasegvee.vkWdpe.kpltLlvltesgkievvdfaf 380
                  +v +L+W +   +++La + +d  v +w      W  +q + ysa++++ + v+W p+  +  L +++++gk++v +f  
  EPX71263.1  54 GPVWQLDWAHPkfGTILASASYDGhVIVWREVDGVW--RQLIDYSAHQASVNaVSWAPHeYGALLACASSDGKVSVLEFKD 132
                 556677777543378888866555588888888888..7888888776555459998873455666777778888888853 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.00021
                 XXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXX CS
        IKI3 308 qsLaWsadSevLavrledr.vqlwtisNyhWYLKqel 343
                   + Ws ++++Lav++ d+ v+l+   N  W L +el
  EPX71263.1 259 WRVSWSLSGNILAVSCGDNkVYLFKETNKKWQLINEL 295
                 6789**********996655***********997776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (297 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       375  (0.0209158); expected 358.6 (0.02)
Passed bias filter:                      311  (0.0173462); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.47u 0.30s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 1979.82
//
Query:       EPX71264.1  [L=951]
Description: deoxycytidyl transferase Rev1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-40  137.5   0.1    6.6e-40  136.5   0.1    1.5  1  IMS         impB/mucB/samB family
    6.9e-19   68.0   0.1    1.7e-18   66.8   0.1    1.7  1  REV1_C      DNA repair protein REV1 C-terminal domain
    1.7e-13   50.8   0.1    3.9e-13   49.6   0.1    1.7  1  BRCT_2      BRCT domain, a BRCA1 C-terminus domain
      4e-10   39.9   0.1    1.3e-09   38.3   0.1    2.0  1  BRCT        BRCA1 C Terminus (BRCT) domain
    2.7e-08   34.5   0.0    6.5e-08   33.3   0.0    1.7  1  IMS_C       impB/mucB/samB family C-terminal domain
    0.00011   22.1   0.0    0.00041   20.3   0.0    2.0  2  PTCB-BRCT   twin BRCT domain
    0.00018   21.7   0.0    0.00047   20.4   0.0    1.8  1  LIG3_BRCT   DNA ligase 3 BRCT domain
     0.0099   16.2   0.0       0.04   14.2   0.0    2.2  1  IMS_HHH     IMS family HHH motif
  ------ inclusion threshold ------
      0.021   15.2   0.0       0.23   11.8   0.0    2.4  2  mCpol       minimal CRISPR polymerase domain
      0.026   14.9   0.0      0.066   13.6   0.0    1.7  1  DUF1805     Domain of unknown function (DUF1805)
       0.13   12.0   1.0        0.3   10.8   1.0    1.5  1  FMN_bind_2  Putative FMN-binding domain
        1.5    8.4   4.2        5.1    6.7   0.4    3.2  3  UBM         Ubiquitin binding region


Domain annotation for each model (and alignments):
>> IMS  impB/mucB/samB family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.5   0.1   4.5e-43   6.6e-40       1     149 [.     289     435 ..     289     436 .. 0.98

  Alignments for each domain:
  == domain 1  score: 136.5 bits;  conditional E-value: 4.5e-43
                 EEETTHHHHHHHHHT.T-TTS-EEEEET....TEEEEE-HHHHTTT--TTSBHHHHHTTHTT-EEEEEE-HHHHHHHHHHHHHHHHH-S..EEEEETTE CS
         IMS   1 iDmdaFyasverardpeLkgkPvvvaqgsekrgiviavsyeArayGvkrgmrikeakklcpdlivvkvdlekyrraskkileilkrfispkvekasiDE 99 
                 +D+d+F+a+v+ ++  +L+ kPv+va+g ++ + +++++yeAr+yG+k+gm ++ ak+lcp l++v +d+++y+ +s++++++l +  ++ ++ +siDE
  EPX71264.1 289 VDFDCFFAAVSTRNTGDLQLKPVAVAHGIKN-SEIASCNYEARKYGIKNGMFVSTAKSLCPSLVLVDYDFDAYEAVSREFYSVLVDTPNDYLKVISIDE 386
                 7***********9999************886.*******************************************************9999******** PP

                 EEEE-HHHHHHHH-SHHHHHHHHHHHHHHHH---EEEEEESSHHHHHHHH CS
         IMS 100 ayldltgleelaesegaalakelrkaikeelgltvsiGiasnkllAKlas 149
                 a ldlt++++ +e+ + ++a+ +r ++  +++++vs+Gi+sn llA+la 
  EPX71264.1 387 ALLDLTNHVQCFED-CVNIAESIRTRVRMKTNCDVSVGIGSNVLLARLAL 435
                 *************9.6********************************95 PP

>> REV1_C  DNA repair protein REV1 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.8   0.1   1.2e-21   1.7e-18       1      91 [.     865     947 ..     865     948 .. 0.95

  Alignments for each domain:
  == domain 1  score: 66.8 bits;  conditional E-value: 1.2e-21
      REV1_C   1 dvrdlleaWveafkeegPneeDvealakyLkkvveeerdlekavavlkwlrvlleeeeeskeeeageaWekafrevkeavqeavrkrgggk 91 
                 d+r+ll++W+++   +gPn+ Dv+++++yL +v++eer+l ka+a+++wl++l +++       ++ aW++a+++  eavqea+  r  ++
  EPX71264.1 865 DLRELLAKWYQKS-PRGPNSHDVDYFSRYLGRVIREERNLLKAQALVRWLQQLNRKD-------KTAAWQTAIEKTIEAVQEACLVRNTPP 947
                 79***********.8**************************************7777.......9*******************9988776 PP

>> BRCT_2  BRCT domain, a BRCA1 C-terminus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.6   0.1   2.6e-16   3.9e-13       2      85 .]      61     146 ..      60     146 .. 0.86

  Alignments for each domain:
  == domain 1  score: 49.6 bits;  conditional E-value: 2.6e-16
      BRCT_2   2 sklFeglrFYindaepspsreklkklIeknGGevvetitsa...vyiviaesneeelaekrkrrvvspkyIkdCikkgkllplenyl 85 
                 s++F+gl+  i + + +ps ++l+++I++nGG++v+  +++    +++++  + +++++ ++++vv+p++I dCi+k+kllp  ny+
  EPX71264.1  61 SNIFKGLSMAI-NGYTNPSYSELRTMIIQNGGTFVQYVDKKtslSFLICSFLTPSKANQWKHHKVVTPQWIVDCINKKKLLPWTNYR 146
                 79*********.678889****************888866644466666666666699***************************96 PP

>> BRCT  BRCA1 C Terminus (BRCT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.3   0.1   8.8e-13   1.3e-09       2      79 .]      60     134 ..      59     134 .. 0.94

  Alignments for each domain:
  == domain 1  score: 38.3 bits;  conditional E-value: 8.8e-13
                 TTTTTTTEEEEEEESTSSHHHHHHHHHHHHTTCEEESSCSTTSSEEEESSSHSHHHHHHHHHHTTSEEEETHHHHHHH CS
        BRCT   2 kellfhgckfvitgvldnftrdeleelikehGGkvttevskktthlvvgepesrslkylealklnipivheewlldci 79 
                 ++++f+g++++i ++++n   +el+++i  +GG+++++v+kkt++ +   ++++ +k ++++++  ++v+++w++dci
  EPX71264.1  60 TSNIFKGLSMAI-NGYTNPSYSELRTMIIQNGGTFVQYVDKKTSLSFLICSFLTPSKANQWKHH--KVVTPQWIVDCI 134
                 789*********.********************************99666679********998..69*********8 PP

>> IMS_C  impB/mucB/samB family C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.3   0.0   4.4e-11   6.5e-08       4     112 ..     520     643 ..     517     648 .. 0.82

  Alignments for each domain:
  == domain 1  score: 33.3 bits;  conditional E-value: 4.4e-11
       IMS_C   4 arpepksissektfpepydesk.lkkelreLaeelarrLrdkglvartitlklrys.............dfh....asrsatLprptsdtreileaalk 84 
                  + +++sis+  +++ ++  ++ +   l++L +el  r+ + ++  +++ l++ ++                     +rs  ++ +t + +++++ + +
  EPX71264.1 520 NETPRRSISVDVNWGVRFVFLEdAMDFLKRLLQELLNRMSKCDVSLHQLQLRVLKRpenvsfdpvkylgA-GevtpLTRSIMFTSATKSFDILYKRLTN 617
                 567899*********97775556999***************************55555554445544441.045679********************** PP

       IMS_C  85 Llrrlidepglpirligvsasnlvekae 112
                 L+ +l   ++  +r ig++as++v+ ++
  EPX71264.1 618 LFISLDV-DPGDVRGIGLQASKIVK-DT 643
                 **77777.****************4.43 PP

>> PTCB-BRCT  twin BRCT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   2.7e-07   0.00041       2      63 .]      68     129 ..      67     129 .. 0.90
   2 ?   -3.1   0.0       5.3   7.9e+03      41      56 ..     834     849 ..     832     850 .. 0.79

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 2.7e-07
                 EEEEECB-TTCHHHHHHHHHHTT-EEESSE..ETT-SEEEECSS-CHHHHHHHHCT.-EEE-CHH CS
   PTCB-BRCT   2 vicvtgysgddrkslqklieamGaeyskdl..tksvTHLicksgeGekyekAkkwg.ipvVsveW 63 
                 ++ + gy++ + ++l+++i ++G+++++ +  ++s+ +Lic   + +k   A++w+  +vV+++W
  EPX71264.1  68 SMAINGYTNPSYSELRTMIIQNGGTFVQYVdkKTSLSFLICSFLTPSK---ANQWKhHKVVTPQW 129
                 67899*************************6556679*****998876...899**99******* PP

  == domain 2  score: -3.1 bits;  conditional E-value: 5.3
                 CSS-CHHHHHHHHCT- CS
   PTCB-BRCT  41 ksgeGekyekAkkwgi 56 
                 ++ + + y+ A++ ++
  EPX71264.1 834 EENRLSRYDLAREVKM 849
                 5678899*****9987 PP

>> LIG3_BRCT  DNA ligase 3 BRCT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0   3.2e-07   0.00047       3      80 ..      61     138 ..      59     139 .. 0.82

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 3.2e-07
   LIG3_BRCT   3 pdiFtgvklfipksv.edykklrRYfiAydGdlvkeekeke.aTHvvvskkeeskkekeksknakaVtaewiwesIkkrt 80 
                  +iF+g  + i+    + y+ lr  +i ++G+ v+  ++k+     + s       ++++ k+ k+Vt++wi ++I+k++
  EPX71264.1  61 SNIFKGLSMAINGYTnPSYSELRTMIIQNGGTFVQYVDKKTsLSFLICSFL--TPSKANQWKHHKVVTPQWIVDCINKKK 138
                 59**********99889*****************98666552666666644..455566677889************986 PP

>> IMS_HHH  IMS family HHH motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.0   2.7e-05      0.04       2      28 ..     449     476 ..     448     480 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.7e-05
     IMS_HHH   2 ddvkefLwplpitkipGiGgklgek.Le 28 
                 +d + ++ +lp+ ++pG+G+++  k +e
  EPX71264.1 449 EDASVYMQSLPVQDLPGVGPSQSSKlFE 476
                 56777999**************999554 PP

>> mCpol  minimal CRISPR polymerase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.1      0.71   1.1e+03      13      46 ..     184     219 ..     179     224 .. 0.75
   2 ?   11.8   0.0   0.00015      0.23      72     105 ..     407     440 ..     388     444 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.71
       mCpol  13 leall..lsndeeeleklskevkeaikklkkllkde 46 
                 +e +l   +++  e++++s+++ +++k+l++   ++
  EPX71264.1 184 VEDALpsYNEEQTEMKERSENLPDSLKSLSNSARHN 219
                 56666434455568999************9988776 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 0.00015
       mCpol  72 elsrvyqkitgltvSiGvGktlrealiaLkkAks 105
                 +++   +  t+  vS+G+G ++  a +aL+kAk 
  EPX71264.1 407 SIRTRVRMKTNCDVSVGIGSNVLLARLALRKAKP 440
                 3444445556999*******************96 PP

>> DUF1805  Domain of unknown function (DUF1805)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   4.4e-05     0.066      33      59 ..     317     343 ..     298     346 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 4.4e-05
                 HHHSB-SEE-HHHHHTT--TT-BHHHH CS
     DUF1805  33 llaapvesvteaAeelGikeGmtgkea 59 
                 + +++++s + +A+++Gik+Gm +  a
  EPX71264.1 317 IKNSEIASCNYEARKYGIKNGMFVSTA 343
                 56899*****************88765 PP

>> FMN_bind_2  Putative FMN-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   1.0    0.0002       0.3      82     155 ..     122     195 ..     118     198 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.0002
                 EEEE-CCCSSTTS-....--EEEEEEEEEEEEEEE---HHHHHHHHHHHHHHHS---...--S-------HCHH CS
  FMN_bind_2  82 daYvsPswYtekkettkvvPTWnYaaVhvyGkakviedeeelrkqledltdqaEaerkkpwkvedapekyiekl 155
                 ++ v+P+w  +  +++k  P  nY a++   + ++++ +e+ r+  ++l++q+ ++ k   +veda ++y e++
  EPX71264.1 122 HKVVTPQWIVDCINKKKLLPWTNYRAIQPVASQSLLSFPETYRERDSQLSKQHHESLKVDSQVEDALPSYNEEQ 195
                 448*********9999***********************************999999999******99998876 PP

>> UBM  Ubiquitin binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.22   3.2e+02       6      22 ..     707     723 ..     704     723 .. 0.85
   2 ?   -1.7   0.1       1.5   2.2e+03      10      25 ..     745     760 ..     740     765 .. 0.81
   3 ?    6.7   0.4    0.0034       5.1       8      29 ..     815     836 ..     813     841 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.22
         UBM   6 pegiDpsFLaaLPpdLR 22 
                  ++i p  La LP +++
  EPX71264.1 707 SSQISPGVLAQLPQSMQ 723
                 56799********9997 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.5
         UBM  10 DpsFLaaLPpdLReEV 25 
                 Dp FL  LP  +R EV
  EPX71264.1 745 DPLFLKELPTPIRNEV 760
                 6669999**99****9 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.0034
         UBM   8 giDpsFLaaLPpdLReEVLaqq 29 
                 ++D   L+ LP +++e VL++ 
  EPX71264.1 815 QVDLQVLEELPKEIQESVLEEN 836
                 489999*************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (951 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1012  (0.0564449); expected 358.6 (0.02)
Passed bias filter:                      490  (0.02733); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.75u 0.29s 00:00:01.04 Elapsed: 00:00:00.48
# Mc/sec: 5910.44
//
Query:       EPX71265.1  [L=361]
Description: FKBP-type peptidyl-prolyl cis-trans isomerase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.3e-29  100.7   0.2    1.3e-28   99.2   0.1    1.9  2  FKBP_C         FKBP-type peptidyl-prolyl cis-trans isomerase
    1.8e-22   79.9   0.0    1.8e-22   79.9   0.0    2.8  2  NPL            Nucleoplasmin-like domain
  ------ inclusion threshold ------
       0.01   16.0  48.0      0.012   15.8  47.2    1.4  1  YL1            YL1 nuclear protein
        0.4    8.8  13.0       0.53    8.4  13.0    1.2  1  Hid1           High-temperature-induced dauer-formation prote
        1.8    8.5  10.1        2.7    7.9  10.1    1.3  1  Suf            Suppressor of forked protein (Suf)
          3    6.3  42.0        5.1    5.6  42.0    1.3  1  TFIIF_alpha    Transcription initiation factor IIF, alpha sub
          6    7.0  25.0       0.54   10.4  20.5    1.4  2  CCSAP          Centriole, cilia and spindle-associated


Domain annotation for each model (and alignments):
>> FKBP_C  FKBP-type peptidyl-prolyl cis-trans isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       4.9   1.3e+04      11      22 ..     113     125 ..      99     143 .. 0.61
   2 !   99.2   0.1   4.9e-32   1.3e-28       3      94 .]     271     358 ..     269     358 .. 0.97

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 4.9
                 EEEEEEEEET.TS CS
      FKBP_C  11 Vtvhykgkle.dg 22 
                 +tvh  g +  ++
  EPX71265.1 113 ATVHLSGNFLmND 125
                 4778887774332 PP

  == domain 2  score: 99.2 bits;  conditional E-value: 4.9e-32
                 CBB-TTCEEEEEEEEEETTSSEEEEHCCHTSEEEEETTSSSSCHHHHHHHTTSBTT-EEEEEEEGGGTTTTTTBCTTTB.TTSEEEEEEEEE CS
      FKBP_C   3 eeakegdtVtvhykgkledgkvfdssrsrakplefkvGsgqvikGfeealegmkvGekrtltippelaYgekglaggvippnatLvFeveLl 94 
                 + a++g++V++ y gkle+gkvfd++ +++kp+ f +G+g+vi+G++ ++ gm+ G++r++ ip ++aYg++   g  ip+n+tLvFev+L+
  EPX71265.1 271 T-ATNGKKVEMRYIGKLENGKVFDKN-TKGKPFAFLLGRGEVIRGWDIGVAGMSEGGERKIVIPAPMAYGNQSIPG--IPKNSTLVFEVKLV 358
                 4.99**********************.9**********************************************66..************95 PP

>> NPL  Nucleoplasmin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.9   0.0   7.1e-26   1.8e-22       1     104 [.       7     121 ..       7     122 .. 0.81
   2 ?  -16.7  18.6         7   1.8e+04      59      59 ..     179     179 ..     127     294 .. 0.65

  Alignments for each domain:
  == domain 1  score: 79.9 bits;  conditional E-value: 7.1e-26
                 EEEEEE-STTEEEE-..TTSSEEEEEEEE-TT....-BT-EEEEEEEEGGGT......................EEEEEEEEEBTTBSEE---EEEESS CS
         NPL   1 fyGlevppgkpvtla..vpadlritmaaldpsaekekekgrvtlkvkvekkkekeke............eeeeleefvlctLdpeknyqqpldltfseg 85 
                 +y+l v+  +   ++   +a++++tma++d +   ek++++++l vkv+ +   + e             ee+ +efvlctL+p++  qqpl+lt+++g
  EPX71265.1   7 VYSLSVKGTDVPAVEepTDASIHLTMASIDAN---EKSNKATSLWVKVRPSMPVDTEddeemdeqmkelLEESQREFVLCTLKPGSLFQQPLNLTITPG 102
                 699999999955555336667**********7...456677777777773332222234568999**9999999************************* PP

                 -EEEEEEES---EEEEEEE CS
         NPL  86 eevffkvtGthtVhLtGny 104
                 +evff+++G+ tVhL+Gn+
  EPX71265.1 103 DEVFFRTAGDATVHLSGNF 121
                 ******************8 PP

  == domain 2  score: -16.7 bits;  conditional E-value: 7
                 . CS
         NPL  59 e 59 
                 e
  EPX71265.1 179 E 179
                 0 PP

>> YL1  YL1 nuclear protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.8  47.2   4.7e-06     0.012      11     133 ..      69     252 ..      67     281 .. 0.57

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 4.7e-06
                 xxxxxxxxxx...............................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx. RF
         YL1  11 lkkLleqeee...............................................edelellFaEeedDeefeseeeeeeeensDsdfdsdeedee. 61 
                 +k+Lle+ ++                                               e+e  +   +eedDe++  + +e++   +D   d++ +de+ 
  EPX71265.1  69 MKELLEESQRefvlctlkpgslfqqplnltitpgdevffrtagdatvhlsgnflmndEEEEHDHSDDEEDDEDYDLSPSEDDL--VDTMSDEKNDDEDe 165
                 677776555566666666666666666666666666666666666666666666654333333566899999*****999886..89888777777776 PP

                 .xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.............xxx.xx..xxxxxxxxxxxxxx RF
         YL1  62 .sdeeedeeegekelerqerkkrkkekkkrkaqkkkskkkkkkqkkkkkkkidp.............qak.ep..rpkkkseraswlpa 133
                  +++ee+ee +e el+++  kk ++ kkkr++q+++++ +k+++kk+k +k  p             q++  p  ++++++e++++ ++
  EPX71265.1 166 sEEDEEEEESEEDELDNAPAKKAEEPKKKRASQEETASPQKNENKKQKTEK--PnkekkvafaekleQGPtGPaaKKEQQQEQKQQPKT 252
                 455555555566677755555553334444444444444443333333332..246888999888773332221122222233333322 PP

>> Hid1  High-temperature-induced dauer-formation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4  13.0   0.00021      0.53     557     699 ..      80     229 ..      69     264 .. 0.48

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00021
        Hid1 557 LvYsilrkrkvfealrnltlesaseeiersne......sarldsideeeeenssessrieesrse.srspslsevpelksslaitddeskaereksate 648
                 +v   l+    f++  nlt+  + e + r +       s    +   ++ee+++++s +ee  ++   sps+ +  + + s +++dde+++e++++++e
  EPX71265.1  80 FVLCTLKPGSLFQQPLNLTITPGDEVFFRTAGdatvhlS---GNFLMNDEEEEHDHSDDEEDDEDyDLSPSEDDLVD-TMSDEKNDDEDESEEDEEEEE 174
                 555666666666666666666666666655555554331...33333333333333333332222022222222221.222223333333333333333 PP

        Hid1 649 ssssqavs....qlremsekarakesaesteesrqesatskkspsgmsqsaeekf 699
                 s+++++ +    +++e+++k++++e++ s++++++++++ +k++++   + +ek+
  EPX71265.1 175 SEEDELDNapakKAEEPKKKRASQEETASPQKNENKKQKTEKPNKEKKVAFAEKL 229
                 3333333333334555555555555555555555555555554444444444444 PP

>> Suf  Suppressor of forked protein (Suf)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9  10.1     0.001       2.7     167     258 ..     172     250 ..     140     293 .. 0.46

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.001
         Suf 167 tkqeeekallqkkeeqaaslees.................kvpqaqeskkrklesedssvkkPdklqmvespk......kgaagrrleqqrksessksa 242
                 +++            +      +                  ++q ++ +  k e+++++++kP+k + v++ +                          
  EPX71265.1 172 EEES-----------E------EdeldnapakkaeepkkkRASQEETASPQKNENKKQKTEKPNKEKKVAFAEkleqgpT------------------- 234
                 1111...........1......0123333211111111112222222222222222222344444444444443333221................... PP

         Suf 243 eaasksqkalqqqpap 258
                  +a+k++++++q+++p
  EPX71265.1 235 GPAAKKEQQQEQKQQP 250
                 2222222222222222 PP

>> TFIIF_alpha  Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6  42.0     0.002       5.1     278     445 ..     125     290 ..     123     302 .. 0.55

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.002
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXX CS
  TFIIF_alpha 278 degrEldyisDdsasendpeeredkkseEeeekkeieqdedeeekeeekkeeegklsk....kkkkakklkkkkkekdkkdSddeedsddsDideeds 371
                  de+ E d+ +D++++e d +      +++  +   +e+++de+e+ee+++eee+++ +      kka+++kk      k+ S++e+ s +   ++++ 
   EPX71265.1 125 DEEEEHDHSDDEEDDE-DYD--LSPSEDDLVDTMSDEKNDDEDESEEDEEEEESEEDEldnaPAKKAEEPKK------KRASQEETASPQKNENKKQK 213
                  8899999988777666.333..33334444555555666666666666655553333300003333333333......34555555555554444443 PP

                  XXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXX.......XXXXXX...XXXXXXXXXXXXXXXX CS
  TFIIF_alpha 372 vslvkakKkkekkkeekvdsnessagnsrparpspeqkdskskrkaa.....seeskspvsvpaKklktenapkssskk 445
                  +   k +K+k+ +  ek +++++++++ ++++   +q++   ++k        +  + + ++  Kk+ +   +k + +k
   EPX71265.1 214 T--EKPNKEKKVAFAEKLEQGPTGPAAKKEQQQEQKQQPKTRTLKGGvsvtdVKTGNGATATNGKKVEMRYIGKLENGK 290
                  3..3556666667777777777777777777666666664444444477665445566667778888887777666555 PP

>> CCSAP  Centriole, cilia and spindle-associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.1         3   7.7e+03      63      83 ..      48      68 ..      30      80 .. 0.41
   2 ?   10.4  20.5   0.00021      0.54      83     201 ..     140     266 ..     108     283 .. 0.62

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 3
       CCSAP 63 knkvepeeskkevkleeeeee 83
                  kv+p+ ++++   ee +e+
  EPX71265.1 48 WVKVRPSMPVDTEDDEEMDEQ 68
                333333333333332222222 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00021
       CCSAP  83 ekeeeraa..............aeeeekaseeeteekevkekekqqakaeasksekekkekekseskqqkpkssalakrekrksakspqqpsekkkenr 167
                 e                     + e+++ ++e +e++e++e+e+ +  ++++k+ +e k+k++s+++ ++p +++  k++k ++++++++ +  +k ++
  EPX71265.1 140 E------DydlspseddlvdtmSDEKNDDEDESEEDEEEEESEEDELDNAPAKKAEEPKKKRASQEETASP-QKNENKKQKTEKPNKEKKVAFAEKLEQ 231
                 1......0122222334455532333334444455555555566666666777888888888888888888.667777777777778888888888888 PP

       CCSAP 168 hPfalygwgekqadtgsr.kThnvsasastneihe 201
                  P       e+q++ +++ kT   +  +s++++ +
  EPX71265.1 232 GPTGPAAKKEQQQEQKQQpKTRTLKGGVSVTDVKT 266
                 88888888888888888888888877777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (361 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2359  (0.131575); expected 358.6 (0.02)
Passed bias filter:                      786  (0.0438396); expected 358.6 (0.02)
Passed Vit filter:                       234  (0.0130515); expected 17.9 (0.001)
Passed Fwd filter:                        86  (0.0047967); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 1.30u 0.37s 00:00:01.67 Elapsed: 00:00:00.53
# Mc/sec: 2042.24
//
Query:       EPX71266.1  [L=324]
Description: sporulation protein Meu14 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-51  174.1   0.3    6.6e-51  173.3   0.3    1.3  1  Pil1      Eisosome component PIL1


Domain annotation for each model (and alignments):
>> Pil1  Eisosome component PIL1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  173.3   0.3   3.7e-55   6.6e-51      54     261 ..      33     240 ..      11     243 .. 0.94

  Alignments for each domain:
  == domain 1  score: 173.3 bits;  conditional E-value: 3.7e-55
        Pil1  54 elarrLakLikseknlvraheaaarerksiakqlseWGedt.dddvsDvsDklgvllselgeledayadrldqsRatlKsirniEasvqpsRdkkekla 151
                 e ++r +++iks k+ v a+ +a++  ++    ls WG +t   ++ D+sDklgvl+selge e ++++++d+sR++lK ir++E s+ psR+++++l 
  EPX71266.1  33 EDSKRSHRMIKSGKTSVDAYRQAGKGLNHFGGYLSDWGSRTrSVSINDISDKLGVLVSELGESELEFVKQFDESRLKLKGIRDMEDSIAPSRAHRQRLV 131
                 559************************************996789****************************************************** PP

        Pil1 152 deiaklkakepqserlvvlEqeLvraeaeslvaeaqlsnitReklkeaytaefdaliEraeKlallarygkrLlellddspvtpGetrpaYdgaeatrq 250
                 ++i+k  +k+p s+rl+ l ++Lvr eae+lv e ql n  Re +k++++  +da+  ra+K++ +  y++ L+++++d+ v pG++  aY++ ++++q
  EPX71266.1 132 ASIEKEEEKDPLSPRLIDLQNQLVRTEAENLVGEMQLDNKIREVMKSSFQQLMDAFQVRAQKQMTVGYYSRLLVDMINDDVVYPGDNPVAYNK-KNAAQ 229
                 *******************************************************************************************97.56889 PP

        Pil1 251 iladaedaLre 261
                 i+ ++ d+++ 
  EPX71266.1 230 IMHQCMDSMSR 240
                 *****998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (324 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1153  (0.0643092); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.47
# Mc/sec: 2081.78
//
Query:       EPX71267.1  [L=365]
Description: TIM22 inner membrane protein import complex subunit Tim54 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.9e-66  222.6   0.0    1.5e-65  221.4   0.0    1.4  1  Tim54       Inner membrane protein import complex subunit Tim
    0.00076   19.0   2.2     0.0012   18.4   2.2    1.3  1  DUF4746     Domain of unknown function (DUF4746)
  ------ inclusion threshold ------
      0.022   14.5   4.6      0.038   13.7   4.1    1.6  2  DUF4569     Domain of unknown function (DUF4569)
      0.069   11.9   1.4        0.1   11.3   1.4    1.2  1  Presenilin  Presenilin
       0.16   12.0   1.6       0.26   11.4   1.6    1.3  1  RP-C_C      Replication protein C C-terminal region
        4.2    7.9   7.9        8.8    6.9   7.9    1.5  1  CALM_bind   Calcium-dependent calmodulin binding


Domain annotation for each model (and alignments):
>> Tim54  Inner membrane protein import complex subunit Tim54
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  221.4   0.0   5.2e-69   1.5e-65      11     362 ..       7     339 ..       3     353 .. 0.81

  Alignments for each domain:
  == domain 1  score: 221.4 bits;  conditional E-value: 5.2e-69
       Tim54  11 nlrlkLPSrnWliFltvlgsitaaiiYDkrekkriqkkwaelvehlakepleveelpRkltvflaaPPgDgLrsarkhfkeYvKpiLvaaalDyevveg 109
                 +++  +P rn  iFl ++g ++++i+YD ++k+ + +k++++v+hlak+ple+++lpRk+ v+l  PPgDg+ +ar+ f++Yv+piL+aaa+D+ev+e 
  EPX71267.1   7 TVKSYMPGRNMSIFLGLVGCVSGGIYYDTHQKNLTIQKYCNQVAHLAKAPLEPQALPRKVRVYLHGPPGDGIWVAREEFEKYVRPILNAAAVDFEVFES 105
                 567889********************************************************************************************* PP

       Tim54 110 rrqGdiRaevAeriRklRrkaeeeekeeeeekeeeelkkleelrkklgieeeegagGviviGRhayKEYirGlhEGlLGPldkpeepeeeeaeeeeeee 208
                 + +G++  ++A  + k R+  +e        +e+e++     +++   ++e++++   + +GRha KE++ G++  +    ++     ++e+++e+e++
  EPX71267.1 106 KGEGNLLEQIATSVWKKRNGISEV-------PEAEKF-----IKSF--LKESDEPSVNLLFGRHALKEFLYGIKYAFSDEYNEK---VVNEMKKEQEKA 187
                 ******************977665.......556666.....3333..4566677778****************9886555555...444444444444 PP

       Tim54 209 eeekeeeeeeeee.eeeekeeekeeekeeeeeeeekekkkkvpkpyispedYasaelppeiPell.qpvlviplphllGflntpiriyrfltrRklade 305
                  + ++++e+++++ ++e++e++++++++ ++++ ++++++++++p    +  ++ +l   +P  l + ++  plphllGf+ntp+riyrf++rR+la+e
  EPX71267.1 188 VKLTDSSENSKTSdTSETSEANDSNSQQISNSQSSENTEEEQTTPVEDISLCKNLTLNGDVPLGLvDLIALYPLPHLLGFTNTPRRIYRFFRRRYLAEE 286
                 44443333333220333333333333333334444444677777778888889**********999999****************************** PP

       Tim54 306 vgrevaavvlak.irpyeeksekaeqqellkeeEkdWpksvvkkekeekesewvqelv 362
                 +g+ ++++vl+  + +       ++   ll+eeE+dWpk+ +++e++ ++++w+ +++
  EPX71267.1 287 LGEITKNIVLNLeSVSIPL----TDGPMLLQEEEADWPKQYINREDA-EKHVWTAPFM 339
                 *********9974443333....58889*****************99.999**99874 PP

>> DUF4746  Domain of unknown function (DUF4746)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   2.2   3.9e-07    0.0012      14     129 ..     118     233 ..     100     252 .. 0.79

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 3.9e-07
     DUF4746  14 cfwKvdetvktppdvlkayahelteervkppdedneeekvlPplieplevkveveeeeelveevsseeetlekqekekektkakeaeltade.paeeee 111
                  +wK  + ++++p+  +++ +   +e+ +p  +     + l  ++  ++  + +e +e++v+e+++e+e+  k + ++e++k++++ +t+++ + ++++
  EPX71267.1 118 SVWKKRNGISEVPEA-EKFIKSFLKESDEPSVNLLFGRHALKEFLYGIKYAFSDEYNEKVVNEMKKEQEKAVKLTDSSENSKTSDTSETSEAnDSNSQQ 215
                 578888888877775.4566666666688888888889999999999********************99999999999988888888888777777777 PP

     DUF4746 112 aeeeeeeeaveeeeeeee 129
                  +++++ e++eee+  ++
  EPX71267.1 216 ISNSQSSENTEEEQTTPV 233
                 788888888888743333 PP

>> DUF4569  Domain of unknown function (DUF4569)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   4.1   1.3e-05     0.038       6      82 ..     160     235 ..     157     250 .. 0.53
   2 ?   -2.6   0.0       1.2   3.6e+03     149     164 ..     298     313 ..     287     333 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.3e-05
     DUF4569   6 fLlgiaYl.eedkka..kakkeekeeekeklldseeakslsseaeaqskslsklsgklissvksseeenskkqqqeleee 82 
                 fL+gi Y   ++ ++   ++ ++++e++ kl+ds e++++s+++e+++++    ++++is+ +s  +en +++q++ +e+
  EPX71267.1 160 FLYGIKYAfSDEYNEkvVNEMKKEQEKAVKLTDSSENSKTSDTSETSEAN--DSNSQQISNSQS--SENTEEEQTTPVED 235
                 8******9544444323333334455555666666666666666666666..334444444333..33444444444444 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.2
     DUF4569 149 vdessvelvdGPlLeS 164
                 ++++s++l+dGP+L+ 
  EPX71267.1 298 LESVSIPLTDGPMLLQ 313
                 4556677777777754 PP

>> Presenilin  Presenilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   1.4   3.5e-05       0.1     255     304 ..     180     230 ..     155     259 .. 0.33

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 3.5e-05
  Presenilin 255 eeseeesseksaqsse.seeeseeesseaessaeesseekeseessessee 304
                  ++e+e++ k + sse s++++++e+sea++s++++ ++++s+e++e++++
  EPX71267.1 180 MKKEQEKAVKLTDSSEnSKTSDTSETSEANDSNSQQISNSQSSENTEEEQT 230
                 111111111111111101111111111111111111111111111111111 PP

>> RP-C_C  Replication protein C C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   1.6   8.6e-05      0.26      26      86 ..     174     232 ..     157     257 .. 0.59

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 8.6e-05
      RP-C_C  26 eelleelealreevenalesalkaenssanesqnerhiqnsnpdsssesepase.kereeke 86 
                 e++++e+++ +e++ +++   +++ens+++++ ++++ ++sn++++s+s+++ + +e+++++
  EPX71267.1 174 EKVVNEMKKEQEKAVKLT---DSSENSKTSDTSETSEANDSNSQQISNSQSSENtEEEQTTP 232
                 567778888887777777...55555555555555555555555444444332202233333 PP

>> CALM_bind  Calcium-dependent calmodulin binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   7.9    0.0029       8.8      22      77 ..     174     229 ..     172     231 .. 0.85

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0029
   CALM_bind  22 aekreemqqyRqkAvqleaklrqarkarstsrvqeieasmeqrrklpqlqqtetfi 77 
                 +++++em++  +kAv+l+ + ++++ ++ +++ +  +++++q  +++++++te+ +
  EPX71267.1 174 EKVVNEMKKEQEKAVKLTDSSENSKTSDTSETSEANDSNSQQISNSQSSENTEEEQ 229
                 5789******************9999988888888888888888888888888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (365 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2220  (0.123822); expected 358.6 (0.02)
Passed bias filter:                      976  (0.0544369); expected 358.6 (0.02)
Passed Vit filter:                       182  (0.0101512); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.73u 0.30s 00:00:01.03 Elapsed: 00:00:00.47
# Mc/sec: 2339.13
//
Query:       EPX71268.1  [L=395]
Description: DNAJ domain-containing protein Scj1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.5e-28   96.7   0.4    1.1e-27   96.0   0.4    1.4  1  DnaJ             DnaJ domain
    3.4e-23   82.4   0.0    4.6e-23   81.9   0.0    1.2  1  DnaJ_C           DnaJ C terminal domain
    1.9e-12   47.4   7.6    3.2e-12   46.6   7.6    1.4  1  DnaJ_CXXCXGXG    DnaJ central domain
      1e-05   25.4   5.0      0.059   13.3   1.2    2.4  2  Anti-TRAP        Tryptophan RNA-binding attenuator protein in
     0.0023   18.0   3.1       0.15   12.1   1.0    2.3  2  HypA             Hydrogenase/urease nickel incorporation, met
  ------ inclusion threshold ------
        4.8    7.6  11.2         10    6.6   0.4    3.4  2  Lar_restr_allev  Restriction alleviation protein Lar


Domain annotation for each model (and alignments):
>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.0   0.4   3.6e-31   1.1e-27       1      63 []      24      86 ..      24      86 .. 0.99

  Alignments for each domain:
  == domain 1  score: 96.0 bits;  conditional E-value: 3.6e-31
                HHHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHHHHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ  1 dyYeiLgvskdasedeIkkaYrklalkyHPDknpkdpeaeekFkeineAyevLsdpekRkqYD 63
                d+Y++Lgv kdase++IkkaYr+l +++HPDknp+++ea+ekF ein+A evLsdpe+Rk+YD
  EPX71268.1 24 DFYKVLGVGKDASEADIKKAYRQLTKQWHPDKNPGNEEAQEKFIEINKANEVLSDPERRKIYD 86
                79************************************************************9 PP

>> DnaJ_C  DnaJ C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.9   0.0   1.5e-26   4.6e-23       5     148 .]     143     371 ..     139     371 .. 0.88

  Alignments for each domain:
  == domain 1  score: 81.9 bits;  conditional E-value: 1.5e-26
                 EEE-HHHHHH-.EEE.EEEE..............................................................................T CS
                 xxxxxxxxxxxxxxxxxxxxxxx.......................................................................xxxxx RF
      DnaJ_C   5 leisleelykGktkkikikrnvi.......................................................................kkekk 32 
                  +i+l  +y+G   ++++  ++i                                                                        + ++
  EPX71268.1 143 AKIDLASFYSGGIMEVEFPVKRIchichgkgynpkysedkaihscpicdgvgfrvlehmiapgfrqqmripcdacggrgrsikhrcphckgervAEVRE 241
                 689999******9999999999999******************************************************************99744455 PP

                 EEEEEE-TT--TT-EEEETT-SSSS...S---EEEEEE.E---SS-EEETTEEEEEEEEEHHHHHHT...EEEEEE-SS-EE.EE.....EE--TT-EE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxx.xx.....xxxxxxxxx RF
      DnaJ_C  33 tlevkipaGikdgqkirlegeGdeeg.gepGDlivtik.vkphpvFkrkgndlyveveislaeallG...gklevptldgkv.kl.....kitqpgevl 120
                 +++v++paG +++ +++++g+ de +  e GD++++++   +++ + rkgndl+ + +is+++allG   +  +++ ldg+  ++     ++++pg++ 
  EPX71268.1 242 KFTVEVPAGAPQDFRVTFSGKSDEIPgIEVGDIVIILQeAGEQDGWIRKGNDLFRKETISYQQALLGnwkK--KIRKLDGSFfEIkrssgEVIHPGQTD 338
                 7**********************8888***********7667799*********7779*********8653..4434433321334455799******* PP

                 EETT-S-EET........TEE--EEEEEEEE-- CS
                 xxxxxxxxxxx.....xxxxxxxxxxxxxxxxx RF
      DnaJ_C 121 rikgkGmpklk.....kpgkrGdlyvevkvefP 148
                 rik++Gmp+++     +++ +G+ ++e++v fP
  EPX71268.1 339 RIKNQGMPIYNtqkgkTTSAFGNAFIEWEVRFP 371
                 ***********999988999************9 PP

>> DnaJ_CXXCXGXG  DnaJ central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.6   7.6   1.1e-15   3.2e-12       1      66 [.     166     234 ..     166     235 .. 0.81

  Alignments for each domain:
  == domain 1  score: 46.6 bits;  conditional E-value: 1.1e-15
  DnaJ_CXXCXGXG   1 CkkCkGsg.....akkgk...kktCktCkGsG.vvreeqktlgp.fvqqsqstCpeCeGtGkvikekdkCkkCkGk 66 
                    C+ C+G+g     +   +    ++C+ C+G G +v e++  ++p f qq++ +C++C+G+G+ i  k++C++CkG+
     EPX71268.1 166 CHICHGKGynpkyS---EdkaIHSCPICDGVGfRVLEHM--IAPgFRQQMRIPCDACGGRGRSI--KHRCPHCKGE 234
                    99******544432...1345889********5555544..888899*****************..889******7 PP

>> Anti-TRAP  Tryptophan RNA-binding attenuator protein inhibitory protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.1   2.2e-05     0.065      12      41 ..     165     195 ..     158     200 .. 0.89
   2 !   13.3   1.2     2e-05     0.059      11      42 ..     212     237 ..     207     241 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.2e-05
                 E-TTTTTTSEETTE.......E-TTTTTSSE CS
   Anti-TRAP  12 kCdaCngsGkiepe.eprasleCPkCsGkgl 41 
                  C  C+g G  +   e +a   CP C G+g+
  EPX71268.1 165 ICHICHGKGYNPKYsEDKAIHSCPICDGVGF 195
                 5********99987799999********996 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 2e-05
                 EE-TTTTTTSEETTE......E-TTTTTSSEE CS
   Anti-TRAP  11 tkCdaCngsGkiepeeprasleCPkCsGkgli 42 
                  +CdaC g G+           CP+C+G+ ++
  EPX71268.1 212 IPCDACGGRGRSIKH------RCPHCKGERVA 237
                 69*********9999......9******9986 PP

>> HypA  Hydrogenase/urease nickel incorporation, metallochaperone, hypA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.5   0.0    0.0057        17      66     100 ..     159     198 ..     141     201 .. 0.74
   2 !   12.1   1.0   4.9e-05      0.15      67      99 ..     208     238 ..     206     246 .. 0.82

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0057
                 EE--EEEETTTS-EEECHH...HHH...S-TTTSSS-EEEE CS
        HypA  66 evpvkvrCreCgkefelee...kal...rCpkCgsadveiv 100
                 e pvk  C+ C+ ++   +   +     +Cp C++ +++++
  EPX71268.1 159 EFPVKRICHICHGKGYNPKyseD-KaihSCPICDGVGFRVL 198
                 46888999999977765442322.14569*****9988775 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 4.9e-05
                 E--EEEETTTS-EEECHHHHHS-TTTSSS-EEE CS
        HypA  67 vpvkvrCreCgkefeleekalrCpkCgsadvei 99 
                 +++++ C+ Cg ++++ +   rCp+C++++v  
  EPX71268.1 208 QQMRIPCDACGGRGRSIK--HRCPHCKGERVAE 238
                 678999*******99774..49*****998864 PP

>> Lar_restr_allev  Restriction alleviation protein Lar
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   3.2     0.024        73       5      36 ..     186     219 ..     182     226 .. 0.59
   2 ?    6.6   0.4    0.0034        10       5      21 ..     227     243 ..     225     249 .. 0.81

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.024
  Lar_restr_allev   5 pCPfCggravlersqrvvaeigq..cvyCadCga 36 
                       CP C g +  + ++  + +  q   + C+ Cg 
       EPX71268.1 186 SCPICDGVGFRVLEHMIAPGFRQqmRIPCDACGG 219
                      6777777666666666655444456666666665 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0034
  Lar_restr_allev   5 pCPfCggravlersqrv 21 
                       CP+C+g+ v e +++ 
       EPX71268.1 227 RCPHCKGERVAEVREKF 243
                      6*******998877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (395 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       749  (0.0417759); expected 358.6 (0.02)
Passed bias filter:                      629  (0.0350828); expected 358.6 (0.02)
Passed Vit filter:                        70  (0.00390429); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.60u 0.28s 00:00:00.88 Elapsed: 00:00:00.49
# Mc/sec: 2443.52
//
Query:       EPX71269.1  [L=451]
Description: CK1/CK1/CK1-G protein kinase Cki1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.4e-25   88.5   0.0    5.9e-25   88.1   0.0    1.1  1  Pkinase         Protein kinase domain
    3.3e-12   46.2   0.0    4.2e-12   45.9   0.0    1.1  1  Pkinase_Tyr     Protein tyrosine kinase
      2e-05   23.6   0.1      2e-05   23.6   0.1    1.4  2  Pkinase_fungal  Fungal protein kinase
    0.00048   19.4   0.5    0.00067   19.0   0.5    1.2  1  UPF0492         Uncharacterized protein family UPF0492
     0.0061   16.5   0.0        2.4    8.0   0.0    2.3  2  APH             Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.1   0.0   1.6e-28   5.9e-25       1     207 [.      12     227 ..      12     275 .. 0.88

  Alignments for each domain:
  == domain 1  score: 88.1 bits;  conditional E-value: 1.6e-28
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS.CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHH.HHSS--H CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklk.hpnivrlyevfeekdelylvleyveggeladlle.rkgslse 97 
                 y++ +k+GeGsfG+++++++  ++++vA+K   ++++      +++ E +  k l  +  i ++y++ +e  + +lv +++   +l+dll    + +s 
  EPX71269.1  12 YKVGRKIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAP----QLRDEYRTYKLLAgSLGIPNVYYYGQEGLHNILVIDLLG-PSLEDLLDlCGRRYSV 105
                 7889**************************988887776....5789********99999********************98.56999999645569** PP

                 HHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEE.TTTE.....EEE-SGTTSEESSSSCS........BCTTTSCGGGS-HHHHTTSCBSHHHHHHH CS
     Pkinase  98 eeakkiakqilegleylHskgiiHrDlKpeNiLid.ekge.....lKitDFGlakelesssk........ltsfvgtseYlAPEvlkeneyskkvDvWs 182
                 +++  +akq+++ ++ +H++++++rD+Kp+N+Li    +      + i+DFG++k ++   +        +++  gt +Y++     ++e s+  D+ +
  EPX71269.1 106 KTVAMVAKQMISRVQAIHERSLVYRDIKPDNFLIGrP-NSkhanmIHIVDFGMVKFYRDPVSkqhipyreKKNLSGTARYMSINTHLGREQSRRDDLEA 203
                 **********************************942.2235778*************9999999****99***********999999999******** PP

                 HHHHHHHHHHSS-STTTSSHHHHHH CS
     Pkinase 183 lGvilyelltgkppfsgekgkekve 207
                 lG +++ +l g+ p++g k  ++ +
  EPX71269.1 204 LGHVFMYFLRGSLPWQGLKAATN-K 227
                 ****************6555442.2 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.9   0.0   1.2e-15   4.2e-12       2     252 ..      13     271 ..      12     278 .. 0.78

  Alignments for each domain:
  == domain 1  score: 45.9 bits;  conditional E-value: 1.2e-15
                  EEEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS.-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTT CS
  Pkinase_Tyr   2 elgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkkl.khpnivkllgvctkeepllivteyvkgGdLlkfLrkkeke 98 
                  ++g+k+GeG+fG ++egt       ++++Va+K   +++++    +l +e+++ k l     i +++    ++ + ++v++++ g +L++ L     +
   EPX71269.1  13 KVGRKIGEGSFGVIFEGTNL----LNNQQVAIKFEPRRSDAP---QLRDEYRTYKLLaGSLGIPNVYYYGQEGLHNILVIDLL-GPSLEDLLDLC-GR 101
                  5789**************99....8899******98877777...55566666666656667777777777788889999987.569*****999.** PP

                  TSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE.....TTEEEE-STTTHEET.....TTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHH CS
  Pkinase_Tyr  99 kltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse.....nkvvkisDfGLardi.....ekddeyvkkeeaklpvkWmapEslkekkftsks 186
                  + ++k++  +a q+ + ++ +++++lv rd+   N L+ +      +++ i DfG+ +       +++  y++k++     ++m++ +   ++ + + 
   EPX71269.1 102 RYSVKTVAMVAKQMISRVQAIHERSLVYRDIKPDNFLIGRpnskhANMIHIVDFGMVKFYrdpvsKQHIPYREKKNLSGTARYMSINTHLGREQSRRD 199
                  **************************************987777789*********98763222122334599999999******************* PP

                  HHHHHHHHHHHHHTTSSGTTTTS...HHHHHHHHH.HTTEES-BBTTS...BHHHHHHHHHHT-SSGGGS--H CS
  Pkinase_Tyr 187 DvWsfGvllwEiftlgespypgl...kneevlekl.kegkrlekpekc...peelyelmkkcweedpeeRptf 252
                  D  + G + +  +  g+ p++gl   +n++ +e++ +++++ +  e c   pee+y+ m+   +   e  p++
   EPX71269.1 200 DLEALGHVFMYFLR-GSLPWQGLkaaTNKQKYERIgDKKQNTPLRELCagfPEEFYQYMHYVRNLPFEATPDY 271
                  ******88776555.9999998843456778888844444444444443337788888877666666665555 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   0.1   5.5e-09     2e-05     313     406 ..     113     210 ..      79     212 .. 0.88
   2 ?   -3.6   0.4      0.99   3.6e+03     255     255 ..     365     365 ..     322     424 .. 0.51

  Alignments for each domain:
  == domain 1  score: 23.6 bits;  conditional E-value: 5.5e-09
  Pkinase_fungal 313 rDaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddsses.....garertGTleFmaievlkgeeHsyrhDLESffy 402
                     ++ I   +  + +  ++ rDi  +N li  +++++ +   ++D+ + k + d+ s++     ++++  GT+ +m+i+   g e s r+DLE +  
      EPX71269.1 113 KQMISRVQAIH-ERSLVYRDIKPDNFLIGRPNSKHANMIHIVDFGMVKFYRDPVSKQhipyrEKKNLSGTARYMSINTHLGREQSRRDDLEALGH 206
                     56677777788.8999*************999999****************988887666665599**************************999 PP

  Pkinase_fungal 403 vllw 406
                     v+++
      EPX71269.1 207 VFMY 210
                     9988 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 0.99
  Pkinase_fungal 255 k 255
                     +
      EPX71269.1 365 A 365
                     1 PP

>> UPF0492  Uncharacterized protein family UPF0492
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.5   1.9e-07   0.00067     215     312 ..     331     426 ..     239     441 .. 0.82

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 1.9e-07
     UPF0492 215 ssgqakdyikaaeshlglpvqklendvnqrqPedtssqqkphsgevlktkllskslvvssesAkqgpkQspraaktqqkkrkrsseekldklkrvsle 312
                 +    ++   + +  ++ +    e+  +++qP+ ++ q+ p + +  ++k +++  +vs++ A   p Q p+++++q    +    e++++ +r+ ++
  EPX71269.1 331 KNVAPQNRLSTRKLVSNSSAM--EHGNSHTQPNSAKAQETPDANALTNEKGRNERVPVSRDQAGVRPMQGPQGQQMQRDVPTVIDTEQTQRPNRIVSK 426
                 555555555554444444444..555589************************************************999888888888888776544 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.1   0.0    0.0026       9.2      21      69 ..      36      83 ..      30      95 .. 0.83
   2 !    8.0   0.0   0.00067       2.4     163     197 ..     122     159 ..      87     161 .. 0.77

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0026
                --EEEEEE-TTS-HHHHHHHHHHHHHHHHTT-B--B-CTTBS-EEETTE CS
         APH 21 gryvlrrnpparaaeeirrevallrlLakagvpvPevlagdtddeeigl 69
                ++++ ++ p +  a+++r+e++ ++lLa++   +P v+++++ + ++ l
  EPX71269.1 36 QQVAIKFEPRRSDAPQLRDEYRTYKLLAGSLG-IPNVYYYGQEGLHNIL 83
                5677888888899***************9977.9*****9887777665 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.00067
                 SS-EEEE-SS-SGGGEEEC.....TTEEEEE---TT-E CS
         APH 163 elptvllHgDlhpgNllvd...pddgrvtGviDfedag 197
                   +++l+ +D++p+N+l+    + +  ++ ++Df++++
  EPX71269.1 122 IHERSLVYRDIKPDNFLIGrpnSKHANMIHIVDFGMVK 159
                 46899**************999555555679***9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (451 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       443  (0.0247086); expected 358.6 (0.02)
Passed bias filter:                      298  (0.0166211); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.46
# Mc/sec: 2944.34
//
Query:       EPX71270.1  [L=180]
Description: RNA exonuclease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      4e-36  125.1   0.0    4.5e-36  124.9   0.0    1.0  1  RNase_T   Exonuclease
      2e-05   24.7   0.0    2.5e-05   24.3   0.0    1.1  1  DUF5051   3' exoribonuclease, RNase T-like
  ------ inclusion threshold ------
       0.14   12.1   0.1       0.22   11.5   0.1    1.3  1  RRF       Ribosome recycling factor


Domain annotation for each model (and alignments):
>> RNase_T  Exonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.9   0.0   7.5e-40   4.5e-36       1     164 [.       9     170 ..       9     171 .. 0.95

  Alignments for each domain:
  == domain 1  score: 124.9 bits;  conditional E-value: 7.5e-40
                 EEEEEEESSSTTCTTS-EEEEEEEEEETTCC..EEEEEEEEEEEHSSHCSSSHHHHHHHHHCHHHHHTCEBHHHHHHHHHHHHHHHTCCCETT.TCEEE CS
     RNase_T   1 vviDlEttgldakekdeiieiaaisidggen..eigetfhfyvkptelakltdecteftgitqemldeapsfkevleefkellrklallvahn.aafdv 96 
                 v+iD+E+tgl+a  kd ++e+aai++dg++    +  + +++  +++la ++++ct  +g ++++ + ++s+ +v e +k+ll++++++v+ + +  ++
  EPX71270.1   9 VWIDCEMTGLQA-GKDVLMEVAAIITDGDLKpiPESFDAVIHLSDQQLASMNEWCTVQHGKSGLTEKCRASTLSVQEVEKKLLNYIKKYVPEKrVGLIA 106
                 9***********.8****************97767777899********************************************************** PP

                 ESSHHHHHHHHHHHHHHHHHCSEHCECHHHHHHHHHCHHHHHHHHHTTCHSSSSTSSHHHHHHHHHHH CS
     RNase_T  97 gflraadkrilkkevpkrnqfldtlildkatlkelartsldklaeklgleedgraHrAldDaeatakl 164
                 g++++ad r+l +e+pk  ++l+++i+d++t+kela+++  +++ +   e+ g  HrAl+D+++++++
  EPX71270.1 107 GNSVHADVRFLSIEMPKVIEHLHYRIVDVSTIKELAKRWRSDIRPY---EKKGD-HRALSDIMESIQE 170
                 *********************************************4...55554.**********986 PP

>> DUF5051  3' exoribonuclease, RNase T-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.3   0.0   4.1e-09   2.5e-05       4     155 ..      10     164 ..       8     174 .. 0.74

  Alignments for each domain:
  == domain 1  score: 24.3 bits;  conditional E-value: 4.1e-09
     DUF5051   4 miDiEtlgne.etaelvsIGaVffpetG.......eFyaeidlesdeeagidaetieWWlkqskea.raellkdtqeakslkdalqaleeFl.....ek 88 
                  iD E++g +  +  l++++a+  +++G       +F a+i+l sd++    a+  eW + q+ +    e ++ +    s +++ ++l +++     ek
  EPX71270.1  10 WIDCEMTGLQaGKDVLMEVAAI--ITDGdlkpipeSFDAVIHL-SDQQL---ASMNEWCTVQHGKSgLTEKCRAS--TLSVQEVEKKLLNYIkkyvpEK 100
                 69******9955556789****..999999*************.66532...34556666665332133334444..7888888888888888777865 PP

     DUF5051  89 slk.vwangasfDlviLraafellipwkywndrdvrtlvalapelekgeekkreipfe.gvkHnALaDA 155
                  +  + +n+   D++ L+  +   i+  +++  dv+t+++la+   ++       p+e + +H AL D 
  EPX71270.1 101 RVGlIAGNSVHADVRFLSIEMPKVIEHLHYRIVDVSTIKELAKR-WRSD----IRPYEkKGDHRALSDI 164
                 665367899999******999998888999999*********55.3332....3344436789***996 PP

>> RRF  Ribosome recycling factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   3.7e-05      0.22      43     116 ..      77     156 ..      63     172 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 3.7e-05
                 TTEEEEEESSCCHHHHHHHHHHHSCC-SEEEE....ESSEEEEE--SSSHHHHHHHH..HHHHHHHHHHHHHHHHHHHHH CS
         RRF  43 artllitpfdkslvkaiekaIlksdlglnpqq....dgevlrvpipplTeErrkelv..keakkaaekakvairniRrda 116
                 a tl++++++k+l++ i+k + ++ +gl   +    d + l + +p++ e     +v    +k++a++++  ir   ++ 
  EPX71270.1  77 ASTLSVQEVEKKLLNYIKKYVPEKRVGLIAGNsvhaDVRFLSIEMPKVIEHLHYRIVdvSTIKELAKRWRSDIRPYEKKG 156
                 789************************988774555666********9998777665116799*********99877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       573  (0.0319594); expected 358.6 (0.02)
Passed bias filter:                      470  (0.0262145); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1293.47
//
Query:       EPX71271.1  [L=293]
Description: ribonuclease H2 complex subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.9e-14   51.8   0.1    7.2e-13   49.0   0.0    2.0  2  RNase_H2-Ydr279  Ydr279p protein family (RNase H2 complex com
    1.4e-11   44.5   0.0    2.5e-11   43.6   0.0    1.5  1  Ydr279_N         Ydr279p protein triple barrel domain


Domain annotation for each model (and alignments):
>> RNase_H2-Ydr279  Ydr279p protein family (RNase H2 complex component) wHTH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.0   0.0     8e-17   7.2e-13       2     156 ..      76     213 ..      76     217 .. 0.85
   2 ?    0.7   0.0     0.061   5.5e+02      17      34 ..     220     252 ..     208     288 .. 0.63

  Alignments for each domain:
  == domain 1  score: 49.0 bits;  conditional E-value: 8e-17
  RNase_H2-Ydr279   2 llipillklkskses.krrFlsldDlldslaessedlsellklersdiprslleerlaaiCdtve.eg.detmYrlseekllefLlsKverlad 92 
                      +l+p+l +l+++++  + rF s+dD++d++ ++  ++s++      +i  s +e  l++iC+  e  g   + Y+l+++ ++++L++K    ++
       EPX71271.1  76 FLLPLLQELTWNRRFePCRFVSFDDIFDHFISQGAHYSRVG-----EILVSKIEHTLQRICKINEaVGsLPKTYQLDKDAVIQMLHRKLVIAQE 164
                      699******9998779*****************99999999.....5999***************63334677*******************98 PP

  RNase_H2-Ydr279  93 eaglpesleekfvrkaleapllsvkreedastseedapeeilkllrlryAidllcssYlppsls 156
                      ++       +++v ++l  +l+         + e+ +pee+ +l+   +A  ++ +++ p++++
       EPX71271.1 165 NL-------PQSVIRELNHQLAPL-------DLESPIPEEMFHLACKEHAAYFVLEDF-PEDWF 213
                      87.......777777787776544.......667889****************97554.44555 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.061
  RNase_H2-Ydr279  17 krrFlsldDlldslaes...............s 34 
                      +++Fl+l+ ++++l e+                
       EPX71271.1 220 QKEFLPLHTYVEQLGEErrkkrekeemlvsrkR 252
                      578999999999999986665555555544440 PP

>> Ydr279_N  Ydr279p protein triple barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.6   0.0   2.8e-15   2.5e-11       2      79 .]       8      72 ..       7      72 .. 0.91

  Alignments for each domain:
  == domain 1  score: 43.6 bits;  conditional E-value: 2.8e-15
    Ydr279_N  2 LPkdasssearivtLphPrtgsksryllcpestgqlyEltkisapkstprSwliepetdrtkgyVlkdakllvatpiD 79
                LP++    + ++v+L hP t+++ ryll   ++++l+ + k+  + ++ rSw+i+       + V++d++++++tp+D
  EPX71271.1  8 LPQNS--ASQQLVELFHPVTKHAFRYLL---TSDELLHVLKVGDS-TQQRSWFIG-------DRVVSDGHIYICTPVD 72
                77777..489******************...3566********76.*********.......9**************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       586  (0.0326845); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 1999.82
//
Query:       EPX71272.1  [L=244]
Description: hypothetical protein SOCG_01491 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.14   11.9   0.0       0.28   10.9   0.0    1.5  1  DUF4538   Domain of unknown function (DUF4538)
        2.1    8.6   3.7       0.77   10.0   0.3    1.9  2  DUF2530   Protein of unknown function (DUF2530)


Domain annotation for each model (and alignments):
>> DUF4538  Domain of unknown function (DUF4538)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   3.1e-05      0.28       2      29 ..     104     131 ..     103     133 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 3.1e-05
     DUF4538   2 rglkyvllvggvvgliglalYPiiiaPl 29 
                 r++ +  l+gg++g+i l lY+   +P+
  EPX71272.1 104 RTQDFWGLFGGFIGAISLFLYSMSQYPK 131
                 56667789**************988885 PP

>> DUF2530  Protein of unknown function (DUF2530)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.3      0.28   2.5e+03      26      58 ..      91     123 ..      80     128 .. 0.68
   2 ?   10.0   0.3   8.6e-05      0.77       6      58 ..     148     199 ..     145     202 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.28
     DUF2530  26 valvvllvvgdaleswlpvclaGlvvGllGlai 58 
                 + lv+++ ++  + +     l G  +G++ l +
  EPX71272.1  91 ILLVMFFYFKVPVRTQDFWGLFGGFIGAISLFL 123
                 556666666666666667777788888776655 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 8.6e-05
     DUF2530   6 LprrLtdprpvivvgtllWlvalvvllvvgdaleswlpvclaGlvvGllGlai 58 
                 + ++L ++ ++++  + l +v++vv  ++ d+ +  + ++  G ++G +G+++
  EPX71272.1 148 ICSVLPNMCVAVICTASLNVVGFVVYRTT-DTRQLRIFIADLGYGMGSIGYGM 199
                 667788888999999999*******9866.999999999************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       657  (0.0366445); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 1861.16
//
Query:       EPX71273.1  [L=349]
Description: cell wall protein Psu1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-95  318.4  12.2    3.8e-95  318.0  12.2    1.1  1  SUN       Beta-glucosidase (SUN family)
  ------ inclusion threshold ------
      0.023   14.7  13.4       0.44   10.5   7.4    2.3  2  DUF3558   Protein of unknown function (DUF3558)


Domain annotation for each model (and alignments):
>> SUN  Beta-glucosidase (SUN family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  318.0  12.2   4.2e-99   3.8e-95       1     245 []      96     337 ..      96     337 .. 0.98

  Alignments for each domain:
  == domain 1  score: 318.0 bits;  conditional E-value: 4.2e-99
         SUN   1 dgkikCsefps.deglvavdalglgGwagiqdvkgesqeCkegsyCsyaCppGylktqwpsaqgatgssvGGLyCnkdGklektnkdskklCekgagkv 98 
                 dg ++Cs+fps +eg+va+d+lglgG++giq  +g +++C+eg+yCsyaC+pG++ktqwps+q+++g++ GGL+C k+Gkl++tn+++++lCe+g g++
  EPX71273.1  96 DGVYDCSSFPSdQEGVVALDYLGLGGYTGIQIGDGAGSHCTEGAYCSYACKPGMMKTQWPSEQPSDGETRGGLIC-KNGKLHRTNTNKNSLCEQGLGSA 193
                 57899*****73689************************************************************.7********************** PP

         SUN  99 kvknklsksvavCrTdyPGtEamlipteveagssaelavpdedtyykwkgkktsaqYYvNkaGvsvedaCvWgseskpvGNwaplvlGagkdedgktyl 197
                 +v+n+l++ va+C+TdyPG+E+m+ipt v+ g s++l+v d+++y++w+g+ tsaq+YvNkaG+s+e++C+Wg++++++GNwaplv+Gag+++ g t+l
  EPX71273.1 194 SVQNNLGQGVAICQTDYPGSENMVIPTFVDGGASSPLTVTDNNNYFHWRGMGTSAQFYVNKAGYSAEKGCQWGNQNDDFGNWAPLVFGAGMTD-GITWL 291
                 ********************************************************************************************9.***** PP

         SUN 198 sifqNptskeklnfnvkieaeegdsvsgkCkyesgklskgggadgCtv 245
                 sifqNp++++k+n+nvki++++g +vsg+C +e+g++ +g  ++gCtv
  EPX71273.1 292 SIFQNPLTQQKANYNVKIVGDDGATVSGDCVFENGSFGNG--SNGCTV 337
                 ************************************9955..99**98 PP

>> DUF3558  Protein of unknown function (DUF3558)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   7.4   4.9e-05      0.44       3      79 ..      47     143 ..      45     174 .. 0.74
   2 ?    7.7   0.3   0.00037       3.3      72     144 ..     258     347 ..     248     349 .] 0.68

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 4.9e-05
     DUF3558   3 laGCssttdGt........apaasssassssttsssaapav..pldtsgvlfdpCglltddqlaelggd..........kekeeaastgangpgCsW 79 
                 +aG ss+++ t        ++++s+s  +ssttss+a+p++   +  +++++  C+ ++ dq   + +d          +  ++a s  ++g+ Cs+
  EPX71273.1  47 VAGGSSEVSPTsssatitpTSSSSTSNGASSTTSSAASPSStgGSSSFQDGVYDCSSFPSDQEGVVALDylglggytgiQIGDGAGSHCTEGAYCSY 143
                 5565656666666667755577777777777777788888899999***************955555554455566666666667777777777766 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.00037
     DUF3558  72 angpgCsWqaads.........agygvsvsfswyegspirrerateerl..ditieGrpaviar........dpgd.easCevavgvadgqvv 144
                 +  +gC+W ++++          g+g++   +w     i ++  t++++  +++i G ++++++        + g+ ++ C+v+v  ++  +v
  EPX71273.1 258 SAEKGCQWGNQNDdfgnwaplvFGAGMTDGITWLS---IFQNPLTQQKAnyNVKIVGDDGATVSgdcvfengSFGNgSNGCTVGVTHGSAKFV 347
                 5678*******999998888776666666666666...444444444445777777777777776666533344445666***9988877776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (349 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       721  (0.0402142); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 2647.36
//
Query:       EPX71274.1  [L=497]
Description: succinate-semialdehyde dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   4.2e-159  529.9   0.1   4.8e-159  529.8   0.1    1.0  1  Aldedh    Aldehyde dehydrogenase family
     0.0054   16.2   0.0      0.016   14.6   0.0    1.7  1  DUF1487   Protein of unknown function (DUF1487)
  ------ inclusion threshold ------
      0.095   12.2   0.0       0.18   11.3   0.0    1.4  1  DUF4892   Domain of unknown function (DUF4892)


Domain annotation for each model (and alignments):
>> Aldedh  Aldehyde dehydrogenase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  529.8   0.1    8e-163  4.8e-159       1     461 [.      31     491 ..      31     492 .. 0.97

  Alignments for each domain:
  == domain 1  score: 529.8 bits;  conditional E-value: 8e-163
                 EET-SSSE.EEEEETTTCEEEEEEE-B-HHHHHHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHTHHHHHHHHHHHH---HHHHHHHHHHHHHHHH CS
      Aldedh   1 wveseset.ievinPatgeviakvpaataedvdaavaaAkeafkawaklpaeeRaeiLrkaadlleerkeelaeletletGkplaearaeveeaidvlr 98 
                 wv ++s++ ++v +P  ++v+a+v+++  e+ ++a++ A+ af+++++ +++eRa+iLr++ +l+ e++++la+++tle+Gk+la++r+ev +a+++l+
  EPX71274.1  31 WVVASSGQvFDVEDPGRNRVLASVTDMAVEETREAIEIAHTAFQKYRHSSVRERAAILRRWYELILENADDLATMMTLENGKSLADSRGEVVYAANFLD 129
                 666777455****************************************************************************************** PP

                 HHHHHHHHHSE.EEEEECTTEEEEEEEEE-SEEEEEE-SSSCCHHHHHHHHHHHHTT-EEEEEE-TTSHHHHHHHHHHHHHTTS-TTSEEE--SS.TCC CS
      Aldedh  99 yyaelaekleg.evlpssegklalvrrePlGvvgaItPWNfPlllaawklapalaaGNtvvlKPaeetplsalllaelfeeaglPkgvlnvvtgs.gse 195
                 ++a++a +++g ++++s +++++l+ ++P+Gvvg+ItPWNfP++++++k+ +alaaG+t+v++Pa etp+sa++la+l+e+ag+P+gv+n+vt +  +e
  EPX71274.1 130 WFAGEALRINGdSHMASVPNNRILTIKQPVGVVGIITPWNFPAAMITRKVGAALAAGCTMVIRPAAETPFSAIALAKLAERAGVPPGVINMVTSNsPAE 228
                 ***********44455569*************************************************************************9876899 PP

                 HHHHHHH-TTESEEEEES-HHHHHHHHHHHHCTTSEEEEEE---EEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHH CS
      Aldedh 196 vgealvehpevdkvsftGstevgrkiakaaaknlkrvtlElGGknplivledaDldkaveaivkgafgnaGQvCiaasrllvqesiydefveklveaak 294
                  g +l+++p ++kvsftGst+vg+ + k+++++lk+++lElGG++p+iv+edaDl+ka++a+++  f+ +GQ+C++a+r++v++++y +fv+ + ++++
  EPX71274.1 229 HGLELTTNPLIRKVSFTGSTNVGKILTKQSSSTLKKLSLELGGNAPFIVFEDADLEKAADALIACKFRGSGQTCVCANRIFVHSNVYTQFVQLVYDRVS 327
                 *************************************************************************************************** PP

                 T--BS-TTSTT-SB---SSHHHHHHHHHHHHHHHHTTSEEEE-TTE.SB-SSST.TEE--EEEES-TTTSHHHHS---SSEEEEEEESSHHHHHHHHHS CS
      Aldedh 295 klkvgdpldedtdvGPliseaqlekvekyveeakeegaklllGgereeaglekg.yfvePtvlanvtpdmriaqeEiFGPVlsvikfkdeeeaieiaNd 392
                 k+++g +lde ++ GPl+s+++++kv+++v++a ++ga+ l+Gg   +  +e g ++++Ptvl + + +m iaqeE+FGPV +++kf++eee+++ aN+
  EPX71274.1 328 KFQLGYGLDEGVTHGPLVSRKAVHKVQEHVDDALNKGATALTGG---SVAYEMGpCYFHPTVLVDAKYNMLIAQEETFGPVCALFKFSTEEEVLKHANS 423
                 ********************************************...44566666******************************************** PP

                 SSEESEEEEE-SBHHHHHHHHHHS-SSEEEESSSST--TTTSEB--CGGGEES-BSHHHHHHHTEEEEE CS
      Aldedh 393 teyGLaagvftkdleraervaerleaGnvyiNdsttgaaealpfgGvkqSglGreggkegleeytevkt 461
                 t++GLa+++f+kd++r++rvae+le+G+v++N+ +++++ + pfgGvk+Sg+Greg+++g++ey+ +k+
  EPX71274.1 424 TPVGLAGYLFSKDISRVFRVAEALEVGMVGCNTGAVSDVLS-PFGGVKESGYGREGSQHGISEYLDIKS 491
                 **********************************9999999.************************997 PP

>> DUF1487  Protein of unknown function (DUF1487)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   2.7e-06     0.016       8     172 ..     275     458 ..     272     472 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 2.7e-06
     DUF1487   8 mvifedgDlnsalealveslkePfaegava..tvlveesirdefvervrsklkp......lseevaeHpsy.lkalekidelkaktisa.......... 87 
                 +++fed+Dl++a++al+       ++  v    ++v+ ++  +fv++v +++ +      l+e v++ p    ka++k++e   + ++           
  EPX71274.1 275 FIVFEDADLEKAADALIACKFRGSGQTCVCanRIFVHSNVYTQFVQLVYDRVSKfqlgygLDEGVTHGPLVsRKAVHKVQEHVDDALNKgataltggsv 373
                 59**************99877776666664236***************999987444444678899888652579999999776666666777888876 PP

     DUF1487  88 ksesakakasPilVldvthsflgd.kpt..gvvTlhtFrnakEvvkllakeslkfasvsvwneklaavyelvarlnvdvftiNCakvs 172
                   e  +    P + +d + + l   + t   v  l  F++ +Ev k ++  ++ +a  +++++ ++ v+ ++++l+v ++  N  +  
  EPX71274.1 374 AYEMGPCYFHPTVLVDAKYNMLIAqEETfgPVCALFKFSTEEEVLKHANSTPVGLAG-YLFSKDISRVFRVAEALEVGMVGCN--TGA 458
                 6677777788999999998887542443326999**********9999888888865.89**************998876554..444 PP

>> DUF4892  Domain of unknown function (DUF4892)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   2.9e-05      0.18      62     117 ..     264     319 ..     239     328 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 2.9e-05
     DUF4892  62 rlpaehsaaeaftqarealleqgaellywcegrdcGssslwanavfGnaklyGpde 117
                 +l  e  ++  f    +a le+ a+ l  c+ r  G++ + an +f ++++y    
  EPX71274.1 264 KLSLELGGNAPFIVFEDADLEKAADALIACKFRGSGQTCVCANRIFVHSNVYTQFV 319
                 55666666667777778889*******************************98655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (497 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       494  (0.0275531); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 3576.34
//
Query:       EPX71275.1  [L=576]
Description: GPI-anchor transamidase complex subunit Gaa1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   1.8e-116  390.1  13.2   4.3e-116  388.9  13.2    1.5  1  Gaa1           Gaa1-like, GPI transamidase component
  ------ inclusion threshold ------
        6.2    6.8   6.5       0.81    9.7   1.4    2.2  2  CoA_binding_3  CoA-binding domain


Domain annotation for each model (and alignments):
>> Gaa1  Gaa1-like, GPI transamidase component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  388.9  13.2  4.8e-120  4.3e-116       1     440 [.     122     523 ..     122     563 .. 0.85

  Alignments for each domain:
  == domain 1  score: 388.9 bits;  conditional E-value: 4.8e-120
        Gaa1   1 kGeNvygilrAprgdstEAlVLvapwrtsdgeknlagvalalalaryfkrqslWaKDiIflvtedeqlglqaWleaYhdvetstlsvqsLdgkaGaiqa 99 
                 +G+N+y++lr+pr+d+tE+l+L++pw++ dg++n+ag+ala++l++yf+ +slW+KDiI+lv+++  +g++a+l+aYhd+++    ++sL+ kaG+iqa
  EPX71275.1 122 EGSNFYTVLRSPRADATESLLLCVPWKDYDGHYNEAGLALAISLMKYFQGWSLWSKDIILLVPDHPVSGTSAFLSAYHDQTPFAYTIDSLRFKAGTIQA 220
                 59*******************************************************************************99**************** PP

        Gaa1 100 AlvlelpssedeidsldikyeGlNGqLPNlDLfnlavsiaskemgikvslqgtlskedsaesyesrlktllrgllkqalgvptgahglFlrYhidaiTl 198
                 Al++elp + ++ d  +i+y+++NGqLPNlDLfn + +i+++ + + ++lqg+  +  + ++y s+lk l r++++qa++++t ah+lF +Y+ida+T+
  EPX71275.1 221 ALAMELPRKGHNNDVAEILYQATNGQLPNLDLFNAVAKIFMSSFMYSLKLQGNVYDPYTSSDYSSKLKALSRSMVSQAVSNLTNAHSLFPKYKIDAVTV 319
                 *************************************************************************************************** PP

        Gaa1 199 kakgkkrsgkeditqlGrviEgvfRslNNLLErlHqSFFfYlLlstsrFvSIGtYlpsavllaasllikalalwlelsksqekeesekaeeeekkesel 297
                   ++++   ++d+t+ G++iE+ fRslNNLLE+lHqS+FfY+Ll++  FvSIG Y+p+a+l+aasl+i  +++w+++ k                    
  EPX71275.1 320 -RIDAGDPFTFDMTRCGQAIESSFRSLNNLLEHLHQSYFFYFLLNQFTFVSIGDYMPAALLIAASLMIGGYRHWMSHPK-------------------- 397
                 .555599********************************************************************5532.................... PP

        Gaa1 298 eerklllvlllvlvlhllgllllllptkltqleenlkteealllalllltvlllllplllslllkrllkakeqkvellksvsllllglllsalallNfS 396
                  + +l  +++l+l+ + ++++++ +++  ++       +   +  +++++v+++ l  l+++        + ++++l  ++sl+  +lll+++++lNfS
  EPX71275.1 398 -HLNLWKPFCLWLLNMGTSFIFMCTSFLSKD-------ARNSVALVVAYAVASIGLYWLFQP--------SRRQAQLTLAYSLMSKSLLLTTVSTLNFS 480
                 .234666888888888888988888877444.......222222333333333333333333........3348899999******************* PP

        Gaa1 397 LallvallavPltfiarpkaeslrrllrllasvlllllsPlvvl 440
                 La++++l ++ ++fi+  +  ++     +++ +l  +l Pl++ 
  EPX71275.1 481 LAYFIGLWLTFIQFISF-SFPRFLLYPVISCVFLAPVLFPLFIE 523
                 ***************88.45555555556666666666666443 PP

>> CoA_binding_3  CoA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.48   4.3e+03      10      47 ..     341     378 ..     339     381 .. 0.81
   2 ?    9.7   1.4     9e-05      0.81       3      67 ..     386     454 ..     384     478 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.48
  CoA_binding_3  10 rgrsllrlllrvlsawllvllllallsfslkdafSRlw 47 
                     +rsl+ ll ++ ++ ++++ll  ++++s++d++   +
     EPX71275.1 341 SFRSLNNLLEHLHQSYFFYFLLNQFTFVSIGDYMPAAL 378
                    57899999999999999999999999999988776554 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 9e-05
  CoA_binding_3   3 lGvYqswrgrsllrlllrvlsawllvlll...lallsfslkda.fSRlwlaywavvglvllivsrllvr 67 
                     G Y++w + ++   l++ +  wll +++   ++++sf+ kda  S  +++ +av+++ l+ + +   r
     EPX71275.1 386 IGGYRHWMSHPKHLNLWKPFCLWLLNMGTsfiFMCTSFLSKDArNSVALVVAYAVASIGLYWLFQPSRR 454
                    699**********************98852114445666677756679999*******99887765555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (576 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       662  (0.0369234); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.33s 00:00:00.99 Elapsed: 00:00:00.50
# Mc/sec: 3457.14
//
Query:       EPX71276.1  [L=588]
Description: SGT1 family transcriptional regulator Sgt1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-82  277.5  21.3    1.7e-78  264.5   0.1    2.0  2  SGT1      SGT1 protein


Domain annotation for each model (and alignments):
>> SGT1  SGT1 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  264.5   0.1   9.6e-83   1.7e-78      15     305 ..      31     316 ..      23     330 .. 0.92
   2 !   14.4  17.7   5.3e-07    0.0095     395     545 ..     343     533 ..     331     549 .. 0.72

  Alignments for each domain:
  == domain 1  score: 264.5 bits;  conditional E-value: 9.6e-83
        SGT1  15 kekeeeklqelleeilakvapllveYiWqkdpFnLkvrtekgdlpahlgGvtkfGdnieDEWFiVyLlkeitkefpelvarvedndgeflLieaaevlP 113
                  e+++++ ++ + ++ + ++ + ++ iWq+++F+Lk  t +g  +  l G+t fGd i DEW+iV+Ll+e ++++ +   r+ d+dgeflLieaa+ lP
  EPX71276.1  31 LEEQKSSARQFKLQLEHLMETYGNDRIWQNEKFTLKEDTIRG--IYCLFGSTDFGDCISDEWWIVWLLFEASRSIKNAFCRIIDADGEFLLIEAAFSLP 127
                 56677778888999999999999*************999655..678**************************************************** PP

        SGT1 114 kWlnPdtsenrvfiykGelhiipksskssevelkakepslsqalellsknpeetlasesiqsaikkrlkgYpekikeslhrahvyvPasvaavLkqrPs 212
                 kW++ d+s+ rv+i++G++ ++  ++++ +  ++ k +s ++a++++s+  e++    ++++ i+ rl++Ype   ++ hra + +P s+a +Lk+  +
  EPX71276.1 128 KWIDEDNSDYRVWIHDGNVLLLCPDQENLQAYERCKPLSRNEAIQQISTG-ENFDIPPKVNRSIRLRLQEYPET-ANNHHRAVITIPRSIAFLLKKDKH 224
                 *******************999888888776699*************976.56999****************86.5789******************** PP

        SGT1 213 LvapAVqaFylRdpvdlkacrtmktFppetrvltsvtftrclYAqLvqqkftpdkrsgyklpsr.sdpeykaaelGmklAhGfEiLcskakkas 305
                 Lv++AV+aFy Rdp++ k c +mk+F p++ v+++v+ft  lYAqL qq+    k + + lps+ ++p ++ aelGmkl +GfEiL+  +++++
  EPX71276.1 225 LVSKAVTAFYYRDPISEKKCDSMKKFYPKDLVTMTVNFTPLLYAQLAQQRT--RKFAPFLLPSQgKEPAFTRAELGMKLTCGFEILYNSNEQEE 316
                 *************************************************95..57888******99999******************9988865 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 5.3e-07
        SGT1 395 edddsWLeiseeeLdkllqeragekelv........................eesskeeeasydleevtksmkaFldk..vSs.....heGaelPeske 462
                 +d+ + ++i++++L+ ++++r +  e+                         ++++ e+ +++dl+++ +++++F++    Ss     + G+e  e ++
  EPX71276.1 343 NDNTNFMNIDPDDLEDMMNNRMKDLEEFgsekenldstgsvssddeqapntsRRNRPEDFNEQDLKDIISKIEEFVESdeESSsgrpdLYGVENQEVDD 441
                 68899******************9999899******************99887778888999**************75222321222256888877776 PP

        SGT1 463 ekev.sfdvdsflkalek..llgskieeeldsddld.....edssedsdeede.edeeee.eaeeeskeeekeslksYmdqmdeELaqttvgk 545
                 e+e+ ++d+++    +++  +++s+  e  + d+++     ++ s+d++++ + ++ e++ +++++++   + +l++Ym++mdeEL++ ++g+
  EPX71276.1 442 EEELyHYDPEKRDGIFQSsdIIESNEGE-IELDETKffnilKEPSSDVNTKANpSALESTsSESSDDELPGNMNLREYMQAMDEELKSQKIGN 533
                 6665378998876666542267666333.222233356677444444444444044444435566777778899****************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (588 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       715  (0.0398795); expected 358.6 (0.02)
Passed bias filter:                      426  (0.0237604); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.31s 00:00:00.95 Elapsed: 00:00:00.48
# Mc/sec: 3710.63
//
Query:       EPX71277.1  [L=512]
Description: dihydrolipoamide dehydrogenase Dld1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.9e-64  217.7   1.5    2.5e-64  217.3   1.5    1.1  1  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
    3.2e-41  140.0   1.6    4.9e-41  139.4   0.3    2.0  2  Pyr_redox_dim  Pyridine nucleotide-disulphide oxidoreductase,
    9.8e-18   64.5   3.6      6e-16   58.8   0.4    3.1  2  Pyr_redox      Pyridine nucleotide-disulphide oxidoreductase
    5.4e-11   42.5   0.3    5.4e-09   35.9   0.0    2.3  2  FAD_oxidored   FAD dependent oxidoreductase
    1.8e-09   37.7   1.9    0.00015   21.9   0.3    2.6  2  NAD_binding_8  NAD(P)-binding Rossmann-like domain
    3.3e-08   33.0   7.2    4.1e-07   29.4   7.2    2.5  1  GIDA           Glucose inhibited division protein A
    1.5e-06   27.8   3.5     0.0022   17.3   0.0    2.9  3  Pyr_redox_3    Pyridine nucleotide-disulphide oxidoreductase
    1.7e-05   24.1   2.5    9.5e-05   21.6   0.9    2.3  2  FAD_binding_2  FAD binding domain
    0.00024   20.5   9.1      0.038   13.2   0.9    3.6  2  FAD_binding_3  FAD binding domain
    0.00028   20.2   0.9     0.0084   15.4   0.1    2.6  2  AlaDh_PNT_C    Alanine dehydrogenase/PNT, C-terminal domain
      0.001   18.3   0.0       0.23   10.6   0.0    2.5  3  K_oxygenase    L-lysine 6-monooxygenase (NADPH-requiring)
     0.0017   17.1   9.7       0.03   13.0   0.3    3.7  4  HI0933_like    HI0933-like protein
     0.0069   15.7   0.2     0.0069   15.7   0.2    2.7  2  Thi4           Thi4 family
  ------ inclusion threshold ------
      0.069   13.0   0.3       0.17   11.8   0.3    1.7  1  3HCDH_N        3-hydroxyacyl-CoA dehydrogenase, NAD binding d


Domain annotation for each model (and alignments):
>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  217.3   1.5   1.9e-67   2.5e-64       1     294 []      47     373 ..      47     373 .. 0.96

  Alignments for each domain:
  == domain 1  score: 217.3 bits;  conditional E-value: 1.9e-67
                  CSEEEE--SHHHHHHHHHHHHHTS-EEEEE....TTHCHHHCSHHHHCHHHHHHHHHHHHH.........................HHHHCHHHHCCC CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxx.........................xxxxxxxxxxxx RF
  Pyr_redox_2   1 kdvvviGgGpAGlaaaltlaqagakvtlve....legtclnggcllskallgvaedaeias.........................evvkklnqgiel 69 
                  +d++viGgGp+G+ aa++ +q g+k+++ve    l+gtcln+gc++ska+l+ ++ +++++                         + vk+l++gie+
   EPX71277.1  47 YDLCVIGGGPGGYVAAIRGSQLGLKTVCVEkrgsLGGTCLNVGCIPSKAMLNNSHIYHTIThdtkhrgievsdakvnigqmlkakdDSVKSLTSGIEF 144
                  689**************************99999****************************************************999********* PP

                  CHCCTCEEEEESCEEEEETEEEC......TCEEEEEESEEEE---EEE-BCTCTTC.TTBEECCSECHHHHHHCCSS-TSEEEEES-SHHHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2  70 llgeevvkidpgkkkvklekkke......gdeekiaydklvlAtGssprdlgipGvaenvgklvrtldsaealklkllpkrivvvGgGyiGvElAaal 161
                  l ++++v++ +g + +++ ++ +         ++i++++ ++AtGs+ + +  pG    +++  r++ s+ al+l ++pk+++v GgG iG+E+ +++
   EPX71277.1 145 LFKKNKVEYAKGTGSFEDPNTLSvkgiqgAPDRQIKAKNFIIATGSEVKAF--PGI---TIDEKRIVSSTGALSLPEVPKKMAVLGGGIIGLEMGSVW 237
                  ******************9999899***97778*****************9..999...88888********************************** PP

                  HHHT-EEEEEESSSSSSTTS-HHHHHHHHHHHHHTTEEEEESCEEEEEEETTE....EEE.EEETTSCEEEESEEEE-S-EEES-HHCS.HCCT-EEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxx RF
  Pyr_redox_2 162 aklgkevtlveardrllraldkelsaaleealekeGvevklgtsvkeidgnge....kle.vvledgeeidadlvvvavGvrpstelle.eklgleld 253
                  ++lg++vt++e ++ +   +d ++s+a  + + k+G ++k+ t++  +++ng+    ++e ++ ++ e+++ad ++va+G++p te+l+ ek+g+eld
   EPX71277.1 238 SRLGADVTVIEFMPSVGGVMDTDISKAFSRIIGKQGLKFKTSTKMLSAKDNGKavemEIEdMKKNKREKLEADVLLVAIGRTPYTEGLGlEKIGVELD 335
                  *****************************************************7755444777777777***************************** PP

                  ETTEEE--TTSBESSTTEEE-GGGCTECCSS--HHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 254 erggivvdeflrtnvpgiyaiGDvaggkggpelaqaAvqqG 294
                  +++++ +d+ +rt++p+i +iGD +    gp+la++A ++G
   EPX71277.1 336 KANRVIMDSEYRTKHPHIRVIGDAT---FGPMLAHKAEDEG 373
                  ***********************99...**********998 PP

>> Pyr_redox_dim  Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       4.7     6e+03      58      76 ..     219     237 ..     216     244 .. 0.80
   2 !  139.4   0.3   3.8e-44   4.9e-41       1     108 [.     392     499 ..     392     501 .. 0.99

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 4.7
                    TTTBEEEEEEECTTHHHHH CS
  Pyr_redox_dim  58 ktgkvlGahivGpgageli 76 
                    k+  vlG  i+G ++g++ 
     EPX71277.1 219 KKMAVLGGGIIGLEMGSVW 237
                    67789*******9888765 PP

  == domain 2  score: 139.4 bits;  conditional E-value: 3.8e-44
                    BEEEEESSSEEEEEES-HHHHHHHHSGEEEEEEEEECGHHHCHTTHTEEEEEEEEETTTTBEEEEEEECTTHHHHHHHHHHHHHTTSBHHHHHTSB CS
  Pyr_redox_dim   1 iptvvftdpevasvGlteeeAkaagieikvgkfpfkangralayaetkgfvKlvadaktgkvlGahivGpgageliqelavaikagltvedladti 96 
                    ip+v++t+peva+vG++e++Ak+ g+++kvg+fpf an+ra+++ +++g+vK++ada+t+++lG+hivGp ageli e+++ai++g+++ed+a+ +
     EPX71277.1 392 IPAVMYTHPEVAWVGMSEQQAKESGLKYKVGTFPFMANSRAKTNMDAEGLVKVIADAETDRLLGCHIVGPMAGELIGEATLAIEYGASAEDVARVC 487
                    79********************************************************************************************** PP

                    SSSSSTGGGGHC CS
  Pyr_redox_dim  97 hihPtlsealke 108
                    h+hPtlsea+ke
     EPX71277.1 488 HAHPTLSEAVKE 499
                    *********997 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.2     0.028        36       3      35 ..      50      82 ..      48      87 .. 0.91
   2 !   58.8   0.4   4.7e-19     6e-16       1      78 [.     220     294 ..     220     302 .. 0.93

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.028
                EEECSSHHHHHHHHHHHHTTSEEEEEESSSSSS CS
   Pyr_redox  3 vvvGgGyiglElAgalaelgkkVtvversdkll 35
                 v+GgG  g  +A   ++lg k+ +ve +  l 
  EPX71277.1 50 CVIGGGPGGYVAAIRGSQLGLKTVCVEKRGSLG 82
                69*************************998876 PP

  == domain 2  score: 58.8 bits;  conditional E-value: 4.7e-19
                 EEEEECSSHHHHHHHHHHHHTTSEEEEEESSSSSSTTSSHHHHHHHHHHHHHTTEEEECSEEEEEEEEETTSEEEEEE CS
   Pyr_redox   1 kvvvvGgGyiglElAgalaelgkkVtvversdkllrllDeeaskilqeklekngievllntkveeiegsedgvesvkl 78 
                 k++v+GgG iglE+++++++lg++Vtv+e ++ +  ++D ++sk++ + + k+g ++ ++tk  + + +++ v   ++
  EPX71277.1 220 KMAVLGGGIIGLEMGSVWSRLGADVTVIEFMPSVGGVMDTDISKAFSRIIGKQGLKFKTSTKMLSAKDNGKAV---EM 294
                 689****************************************************************999864...33 PP

>> FAD_oxidored  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.9   0.0   4.2e-12   5.4e-09       1      66 [.      48     109 ..      48     190 .. 0.59
   2 ?    4.6   0.0     0.013        17       3      44 ..     222     263 ..     221     313 .. 0.87

  Alignments for each domain:
  == domain 1  score: 35.9 bits;  conditional E-value: 4.2e-12
  FAD_oxidored   1 DvvVvGGgpaGvaAAiaAaraGakvlLveergvlGGlltsglvatdignkaeeqvvtgiarefler 66 
                   D++V+GGgp+G++AAi   + G k++ ve+rg lGG+  + +  +   + ++    + i+  +++ 
    EPX71277.1  48 DLCVIGGGPGGYVAAIRGSQLGLKTVCVEKRGSLGGTCLNVGCIPSKAMLNN----SHIYHTITHD 109
                   99**********************************9988776555554422....3344444444 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.013
  FAD_oxidored   3 vVvGGgpaGvaAAiaAaraGakvlLveergvlGGlltsglva 44 
                    V GGg+ G+       r Ga v ++e  + +GG +   +  
    EPX71277.1 222 AVLGGGIIGLEMGSVWSRLGADVTVIEFMPSVGGVMDTDISK 263
                   599*******************************99766655 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.3   1.2e-07   0.00015       1      37 [.      51      87 ..      51     113 .. 0.90
   2 !   14.7   0.1   2.1e-05     0.027       1      38 [.     223     260 ..     223     290 .. 0.89

  Alignments for each domain:
  == domain 1  score: 21.9 bits;  conditional E-value: 1.2e-07
                   EE--SHHHHHHHHHHHCCTEEEEEE-SSSSSSGGG-E CS
  NAD_binding_8  1 IvGaGlsGlvaAylLakagfdvlllekrdrlGGraas 37
                   ++G+G +G vaA + ++ g++ +++ekr +lGG +  
     EPX71277.1 51 VIGGGPGGYVAAIRGSQLGLKTVCVEKRGSLGGTCLN 87
                   8********************************9976 PP

  == domain 2  score: 14.7 bits;  conditional E-value: 2.1e-05
                    EE--SHHHHHHHHHHHCCTEEEEEE-SSSSSSGGG-EE CS
  NAD_binding_8   1 IvGaGlsGlvaAylLakagfdvlllekrdrlGGraasy 38 
                    ++G+G+ Gl + +  ++ g+dv+++e  +++GG + + 
     EPX71277.1 223 VLGGGIIGLEMGSVWSRLGADVTVIEFMPSVGGVMDTD 260
                    89*******************************99886 PP

>> GIDA  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4   7.2   3.2e-10   4.1e-07       1     194 [.      48     228 ..      48     316 .. 0.77

  Alignments for each domain:
  == domain 1  score: 29.4 bits;  conditional E-value: 3.2e-10
                 CEEEE-SSHHHHHHHHHHHHTT--EEEE...ES-GGGTT--SSSSEEE-TTHHHHHHHHHHHT-SHHHHHHHHEEEEEEESTTS-CCC-EEEEEE-HHH CS
        GIDA   1 dviViGgGhAGceAAlaaarlGakvlLi...thkldtiaelsCnpsiggiakgllvrEidalggliikaadkagiqfrilNrskGpavralraqvdrel 96 
                 d+ ViGgG  G+ AA+  ++lG+k++ +       +t+++++C ps   + ++++ + i +     +     a++          + ++ l+a+ d  +
  EPX71277.1  48 DLCVIGGGPGGYVAAIRGSQLGLKTVCVekrGSLGGTCLNVGCIPSKAMLNNSHIYHTITHDTKHRGIEVSDAKV----------NIGQMLKAKDDSVK 136
                 678*************************88777789***********************9966555544555555..........67888888888888 PP

                 HHHHHHHHHHTSTTEEEEES-EEEEEECTTEEEEEEETTS-EEEECEEEE--TT-BT-EEEETTEEEESSCTTC--B-THHHHHHHTT--EEEEEEEE CS
        GIDA  97 yskevteklenepnleiieeeveeliveekkvkgvvtedgetikakavviatGtflkgkihigekelsaGrlgeltseglseslkelgfellrlktgt 194
                   ++  e l +++++e  +++ +  ++++ +vkg+  + +++ikak+++iatG+ +k+ + i   ++++ r   + s   + sl e+++++  l +g+
  EPX71277.1 137 SLTSGIEFLFKKNKVEYAKGTGSFEDPNTLSVKGIQGAPDRQIKAKNFIIATGSEVKAFPGI---TIDEKR---IVSSTGALSLPEVPKKMAVLGGGI 228
                 889999999999**********9999999*************************33333333...333333...334445555556666666666665 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   1.2   0.00083       1.1       2      33 ..      51      82 ..      50      87 .. 0.81
   2 ?    0.3   0.0      0.26   3.3e+02     131     147 ..     156     172 ..     154     177 .. 0.90
   3 !   17.3   0.0   1.7e-06    0.0022     121     293 ..     177     346 ..     173     357 .. 0.71

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00083
  Pyr_redox_3  2 IiGaGPaGlaaaielkkagledylilEkg.nig 33
                 +iG+GP G  aai   ++gl++ + +Ek  ++g
   EPX71277.1 51 VIGGGPGGYVAAIRGSQLGLKT-VCVEKRgSLG 82
                 8*******************75.5666643665 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.26
  Pyr_redox_3 131 AtGefdkPnklnipGee 147
                   tG f+ Pn+l+++G +
   EPX71277.1 156 GTGSFEDPNTLSVKGIQ 172
                  59*************87 PP

  == domain 3  score: 17.3 bits;  conditional E-value: 1.7e-06
  Pyr_redox_3 121 etyeAkkviiAtGefdkPnklnipGeeklvkhyskvkefhkyagqkvvViGgknSavDaAlelvrkgaeVtvvtrgseiekeesdpsyslkpdienrl 218
                  ++++Ak+ iiAtG  +   +++i   e + +++s+     +   +k++V Gg+  + ++     r ga+Vtv+    ++          +  di + +
   EPX71277.1 177 RQIKAKNFIIATGS-EVKAFPGITIDE-KRIVSSTGALSLPEVPKKMAVLGGGIIGLEMGSVWSRLGADVTVIEFMPSVG-------GVMDTDISKAF 265
                  589***********.999999999999.78888887766677899****************************9987544.......44566666666 PP

  Pyr_redox_3 219 eelvkeekikvlfnaevkeikekeeeykvktedgkkvev....kddvvlatGykpdlsf..lkkslfeldedgrpvlteet 293
                   +++ ++ +k+ + +++ + k++ + ++++ ed kk +      d  ++a+G +p ++   l+k ++eld+ +r+ +++e 
   EPX71277.1 266 SRIIGKQGLKFKTSTKMLSAKDNGKAVEMEIEDMKKNKRekleADVLLVAIGRTPYTEGlgLEKIGVELDKANRVIMDSEY 346
                  666666546665655555555555555555443333222223246666679*99998873456688999888888887765 PP

>> FAD_binding_2  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.9   7.4e-08   9.5e-05       1      37 [.      48      84 ..      48      87 .. 0.94
   2 ?    1.6   0.0     0.087   1.1e+02       3      44 ..     222     265 ..     220     312 .. 0.87

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 7.4e-08
                   SEEEE--SHHHHHHHHHHHHTTT-EEEEESSSGGGSG CS
  FAD_binding_2  1 DviViGsGlAGLaAAleaaeaGlkvavvekeqefgga 37
                   D+ ViG+G +G++AA++ ++ Glk+++vek ++ gg+
     EPX71277.1 48 DLCVIGGGPGGYVAAIRGSQLGLKTVCVEKRGSLGGT 84
                   788*****************************99986 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.087
                    EEE--SHHHHHHHHHHHHTTT-EEEEESSSGGGS..GGGG--S- CS
  FAD_binding_2   3 iViGsGlAGLaAAleaaeaGlkvavvekeqefgg..atawsqGg 44 
                     V G+G+ GL  +   ++ G++v+v+e ++++gg   t +s + 
     EPX71277.1 222 AVLGGGIIGLEMGSVWSRLGADVTVIEFMPSVGGvmDTDISKAF 265
                    699****************************9998877777665 PP

>> FAD_binding_3  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.9     3e-05     0.038       2      34 ..      47      79 ..      46      84 .. 0.93
   2 !    6.6   1.9    0.0031       3.9       6     119 ..     223     373 ..     219     387 .. 0.54

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 3e-05
                   EEEEEE--SHHHHHHHHHHHHTTHHEEEEESSS CS
  FAD_binding_3  2 tdVlIVGaGpaGlmlallLseaGvrvvlvekrs 34
                   +d +++G+Gp G ++a   s+ G ++v+vekr 
     EPX71277.1 47 YDLCVIGGGPGGYVAAIRGSQLGLKTVCVEKRG 79
                   6889***************************86 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0031
                    EE--SHHHHHHHHHHHHTTHHEEEEESSSSSCCSSS--EEEHHHHHHHHHTT-HHHHHHHSEECCCCEEEEEEE...................... CS
  FAD_binding_3   6 IVGaGpaGlmlallLseaGvrvvlvekrsttvvlpradglnqrtmellrqlGledrilaegapnelmgealyne...................... 79 
                    + G+G  Gl  +++ s+ G +v+++e + +       d+ +    +++ + Gl+ +   +  + + +g+a++ e                      
     EPX71277.1 223 VLGGGIIGLEMGSVWSRLGADVTVIEFMPSVGGVMDTDISKAF-SRIIGKQGLKFKTSTKMLSAKDNGKAVEMEiedmkknkrekleadvllvaig 317
                    6677777777777777777777777766555444444444333.3566666666666666666666666666665555555555555555555544 PP

                    ...........CCCC.......CEEEEEHHCHHCST-CEE--HHHHHHHHHHHHHHHT CS
  FAD_binding_3  80 ...........lsdt.......pkaradlelesspervtvypqteleriLvehaeerg 119
                                  +       +++  d e +++++++ v++   + ++L+++ae +g
     EPX71277.1 318 rtpyteglgleK--IgveldkaNRVIMDSEYRTKHPHIRVIGDATFGPMLAHKAEDEG 373
                    444444444330..13333322444444445566666666666666666666666665 PP

>> AlaDh_PNT_C  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.1     0.057        73      31      60 ..      49      78 ..      42      90 .. 0.90
   2 !   15.4   0.1   6.6e-06    0.0084      28      74 ..     218     265 ..     206     315 .. 0.80

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.057
                 EEEESTSHHHHHHHHHHHHTT-EEEEEESS CS
  AlaDh_PNT_C 31 vlviGgGvaGlqAiatakglgakVtvlDvr 60
                   viGgG  G  A+   ++lg k++ +++r
   EPX71277.1 49 LCVIGGGPGGYVAAIRGSQLGLKTVCVEKR 78
                 57*******************999998877 PP

  == domain 2  score: 15.4 bits;  conditional E-value: 6.6e-06
                  --EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHH.TTTCE CS
  AlaDh_PNT_C  28 pakvlviGgGvaGlqAiatakglgakVtvlDvrparleqles.lgakf 74 
                  p k+ v+GgG+ Gl+  ++ ++lga+Vtv++  p++   +++ + + f
   EPX71277.1 218 PKKMAVLGGGIIGLEMGSVWSRLGADVTVIEFMPSVGGVMDTdISKAF 265
                  5799**************************998887666665555555 PP

>> K_oxygenase  L-lysine 6-monooxygenase (NADPH-requiring)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       4.1   5.2e+03     183     200 ..      38      55 ..      33      59 .. 0.68
   2 !    5.1   0.0    0.0083        11     131     205 ..     164     232 ..     135     251 .. 0.67
   3 !   10.6   0.0   0.00018      0.23     289     339 ..     268     317 ..     257     320 .. 0.91

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 4.1
  K_oxygenase 183 erkeellakkriaVvGsG 200
                   + ++++++ ++ V+G+G
   EPX71277.1  38 ASSPSKNSEYDLCVIGGG 55 
                  555567777888888888 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.0083
  K_oxygenase 131 elltveskdaegeeeelearnlvlgvGte.pkiPevleklegkervvHsseylerkeellakkriaVvGsGqSaae 205
                  + l+v+   +    ++++a+n ++++G+e  + P ++ +   ++r+v s  +l+     + +k++aV G+G  + e
   EPX71277.1 164 NTLSVKGI-QGAPDRQIKAKNFIIATGSEvKAFPGITID---EKRIVSSTGALSLP---EVPKKMAVLGGGIIGLE 232
                  34455542.3334689***********661556666553...36777777776665...78999999999976666 PP

  == domain 3  score: 10.6 bits;  conditional E-value: 0.00018
  K_oxygenase 289 vkgeerlrllpnrevesaeaegkgeveltlrneesgeeetlevdavvlATG 339
                  + g++ l++++++++ sa+ +gk +ve+++++ +++++e+le+d++++A G
   EPX71277.1 268 IIGKQGLKFKTSTKMLSAKDNGK-AVEMEIEDMKKNKREKLEADVLLVAIG 317
                  557788999*************6.************************988 PP

>> HI0933_like  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.3   2.3e-05      0.03       2      36 ..      48      82 ..      47      89 .. 0.92
   2 ?   -1.2   0.0      0.51   6.5e+02     148     166 ..     174     192 ..     128     215 .. 0.79
   3 ?    3.3   0.3     0.021        27       2      36 ..     220     254 ..     219     258 .. 0.92
   4 !    4.7   0.1    0.0081        10     110     167 ..     260     321 ..     257     340 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2.3e-05
                 SEEEE--SHHHHHHHHHHHHTT--EEEE-SSSSS- CS
  HI0933_like  2 dviviGgGaAGlmaAisaakrgkrVlllekakklg 36
                 d+ viGgG+ G  aAi+ ++ g +++ +ek  +lg
   EPX71277.1 48 DLCVIGGGPGGYVAAIRGSQLGLKTVCVEKRGSLG 82
                 789***************************99987 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.51
                  .TTEEEEESEEEE----SS CS
  HI0933_like 148 kseeeleadklvlAtGGlS 166
                    +++++a++ ++AtG++ 
   EPX71277.1 174 APDRQIKAKNFIIATGSEV 192
                  4678999999999999864 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.021
                  SEEEE--SHHHHHHHHHHHHTT--EEEE-SSSSS- CS
  HI0933_like   2 dviviGgGaAGlmaAisaakrgkrVlllekakklg 36 
                  +++v+GgG  Gl      ++ g++V+++e ++++g
   EPX71277.1 220 KMAVLGGGIIGLEMGSVWSRLGADVTVIEFMPSVG 254
                  689*********9999999***********99988 PP

  == domain 4  score: 4.7 bits;  conditional E-value: 0.0081
                  HHHHHHHHHHHHHT-EEE-S--EEEEECETTE.EEEEE......TTEEEEESEEEE----SS- CS
  HI0933_like 110 divdallkelkeagvklrletevksvekeedgkfrvktk.....seeeleadklvlAtGGlSi 167
                  di +a+ + + ++g k++++t++ s++  ++++++++++     ++e+lead l++A+G + +
   EPX71277.1 260 DISKAFSRIIGKQGLKFKTSTKMLSAKD-NGKAVEMEIEdmkknKREKLEADVLLVAIGRTPY 321
                  677888899999*************954.5555766663355557899**********97665 PP

>> Thi4  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.2   5.4e-06    0.0069      13      68 ..      42      96 ..      31     212 .. 0.88
   2 ?    1.2   1.1      0.14   1.8e+02      20      58 ..     221     258 ..     202     276 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 5.4e-06
                HHHTEEEEEEE--SHHHHHHHHHHHHCTTS-EEEEESSSS--TTTTTTSTTBSEEE CS
        Thi4 13 lkyaesDvvivGaGssGLtaayylakkpdlkvailersvspGGGawlGGqlfsaiv 68
                 k  e D+ ++G+G+ G  aa   ++  +lk++ +e++ s+GG     G + s+ +
  EPX71277.1 42 SKNSEYDLCVIGGGPGGYVAAIRGSQL-GLKTVCVEKRGSLGGTCLNVGCIPSKAM 96
                567899***************988877.***************9877776665554 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.14
                 EEEE--SHHHHHHHHHHHHCTTS-EEEEESSSS--TTTT CS
        Thi4  20 vvivGaGssGLtaayylakkpdlkvailersvspGGGaw 58 
                 +++ G+G  GL  + + ++  +  v+++e   s+GG + 
  EPX71277.1 221 MAVLGGGIIGLEMGSVWSRL-GADVTVIEFMPSVGGVMD 258
                 6899***************9.9*************9775 PP

>> 3HCDH_N  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.3   0.00013      0.17       1      59 [.     220     278 ..     220     309 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00013
                 EEEEE--SCCHHHHHHHHHHTT-EEEEE-S-HHHHHHHHHHHHHHHHCCTTTTSS-HHH CS
     3HCDH_N   1 kvaviGaGtmGagiaavfasagleVvlvdiseealekalekieksleklvekgklkeee 59 
                 k av+G G++G ++ +v  + g +V++++  ++        i+k +++ + k+ lk ++
  EPX71277.1 220 KMAVLGGGIIGLEMGSVWSRLGADVTVIEFMPSVGGVMDTDISKAFSRIIGKQGLKFKT 278
                 579***************************99999999999999999988888777333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (512 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       574  (0.0320152); expected 358.6 (0.02)
Passed bias filter:                      494  (0.0275531); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.71u 0.28s 00:00:00.99 Elapsed: 00:00:00.48
# Mc/sec: 3205.15
//
Query:       EPX71278.1  [L=365]
Description: RNA polymerase specificity factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.5e-44  149.8   0.0    9.3e-44  149.5   0.0    1.0  1  RrnaAD    Ribosomal RNA adenine dimethylase
  ------ inclusion threshold ------
      0.085   12.7   0.0        0.7    9.7   0.0    2.2  2  TetR_N    Bacterial regulatory proteins, tetR family


Domain annotation for each model (and alignments):
>> RrnaAD  Ribosomal RNA adenine dimethylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.5   0.0     1e-47   9.3e-44       9     264 ..      38     352 ..      31     353 .. 0.94

  Alignments for each domain:
  == domain 1  score: 149.5 bits;  conditional E-value: 1e-47
                 G--EE--HHHHHHHHHHH-GG....TTSEEEEES-TTTCCHHHHHCC-..SEEEEE-S-HHHHHHHHCHTT.TCCCEEEE-S-CCGHHHHHHHCT.... CS
      RrnaAD   9 gqnflknkkvineIldklnle....ekltvleigpGkGilTeeLakra..kqvvvlElderLakllqkkls.kdeklkvvhqDflkfetpeevte.... 96 
                 ++++l+n+ +++++l+++nl+    ++lt++e++pG G+++++L +++  k++ +lE++  ++ +l+k  s  +++++++++++ k++t++e++e    
  EPX71278.1  38 TSSYLINQDLMDKALEASNLRqqynPNLTIVEMAPGAGVMSTSLYNYFqpKNHILLESRDTFFDPLRKLSSqTNGRMQLIEKEGFKWNTYSELIEsril 136
                 799*****************************************************************666999************************* PP

                 ..........TTCCCCEEEEEEE--T.TTHHHHHHHHHH.......GGGGCEEEEEEEEEHHHHHHHH--TTSTT-SHHHHHHHHHEEEEEEEEC-GG. CS
      RrnaAD  97 ..........kdsihqeflvvanlPy.eistqlvkqlle.......esrfglvkmllwlqkefarrllarpgskkrsrlsvlreaftdvklvakveks. 176
                             s h+e+l++a++P  + +  + +q++e       ++  g+v++llwl++++a ++l ++g+++rs + v reaf+d++++  + +  
  EPX71278.1 137 qvtrqseaeqAVSTHRELLFAAHIPIqYYGLLFTSQVVEylasrdwLGYYGRVRVLLWLPRSPAITILTSRGFRNRSMTAVRREAFIDTRVIVGSQSIh 235
                 *********999*************999******************99999*****************************************999999* PP

                 ............................CECS--SSSEEEEEEEE-SS-S--S-HHHHHHHHHHHHCTTTSBCCCHCCCTSTCHHHHHCTT...T--TT CS
      RrnaAD 177 ............................ifsPppkvdsalvelerkdedlpqkdlkkyesvvrkllnrkrktlstslksllpggelqalsst..gindn 245
                                              f +p      lvel++k+ d + ++l+ +++v++ ll   r +l+ sl++l+ g+    +  +  g++ +
  EPX71278.1 236 dglmkrcsskskyshdvpkpliqppddlEFMEPLHDGHILVELTSKPLD-NSLSLSLFTQVIKSLLYTSRGKLKDSLERLGAGATNLIPAIQdaGVDVE 333
                 *********************999999977777455559**********.8********************************9998887777899999 PP

                 TCCCCSGHHHHHHHHHHHH CS
      RrnaAD 246 alvkklsaeqtldifkela 264
                  +  +lsae++ +i  +++
  EPX71278.1 334 LPSFCLSAEDFKTITRIYE 352
                 9999999999999887765 PP

>> TetR_N  Bacterial regulatory proteins, tetR family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   7.8e-05       0.7      17      46 ..      65      94 ..      55      94 .. 0.87
   2 ?   -0.4   0.0      0.11   9.9e+02       8      26 ..     203     221 ..     200     228 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 7.8e-05
                --HHHHHHHHTSSHHHHHHHTSSHHHHHHH CS
      TetR_N 17 ttvreIAkrAGvskgalYryFpsKeeLlea 46
                +t+ e A  AGv   +lY yF+ K  +l++
  EPX71278.1 65 LTIVEMAPGAGVMSTSLYNYFQPKNHILLE 94
                566677788***************999976 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.11
                 HHHHHHTTT--HHHHHHHH CS
      TetR_N   8 lfaerGydattvreIAkrA 26 
                  +  rG+++ ++ ++ ++A
  EPX71278.1 203 ILTSRGFRNRSMTAVRREA 221
                 57789********999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (365 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       336  (0.0187406); expected 358.6 (0.02)
Passed bias filter:                      312  (0.017402); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2540.66
//
Query:       EPX71279.1  [L=169]
Description: hypothetical protein SOCG_01498 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      7e-21   74.6   0.0      1e-20   74.1   0.0    1.2  1  Acetyltransf_1   Acetyltransferase (GNAT) family
    1.1e-09   38.5   0.0    1.9e-09   37.8   0.0    1.3  1  Acetyltransf_7   Acetyltransferase (GNAT) domain
    1.1e-06   28.5   0.0    1.7e-06   27.9   0.0    1.3  1  FR47             FR47-like protein
    1.5e-06   28.2   0.0      2e-06   27.8   0.0    1.2  1  Acetyltransf_10  Acetyltransferase (GNAT) domain
    9.7e-06   26.3   0.0    1.2e-05   26.0   0.0    1.1  1  Acetyltransf_3   Acetyltransferase (GNAT) domain


Domain annotation for each model (and alignments):
>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.1   0.0   2.8e-24     1e-20      16     116 ..      37     141 ..      19     142 .. 0.81

  Alignments for each domain:
  == domain 1  score: 74.1 bits;  conditional E-value: 2.8e-24
                     HHHHHHHHHHHHHHSTTC..EEEEEEETTEEEEEEEEEEEET..TSTTEEEEEEEEESGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTEH CS
  Acetyltransf_1  16 nedaseeefeesfsleae..gllvaeedgeliGfisllkipd..ekggvayieslaVspeyrgkGlGsaLlealeerareegikkivlaveednd 106
                       ++s+  ++ + ++ ++  ++l++ee+++++G++ ++ +    + +  +y+e+l++ p++rgkG+Gs Ll +l+++ ++ g+k++ + v ++n+
      EPX71279.1  37 ATEESLLNVFGFNENSNPtaYCLFVEENEKPVGMAIYFLNFStwTGRVGIYLEDLYIQPTHRGKGYGSFLLSYLARESLRIGGKRLDWVVLDWNQ 131
                     3333333355554445554255559******************99999**************************************999****** PP

                     HHHHHHHHTT CS
  Acetyltransf_1 107 aairlYeklG 116
                     +ai +Yek G
      EPX71279.1 132 KAIDVYEKAG 141
                     ********98 PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.8   0.0   5.3e-13   1.9e-09       4      73 ..      57     141 ..      54     141 .. 0.71

  Alignments for each domain:
  == domain 1  score: 37.8 bits;  conditional E-value: 5.3e-13
                     EEEEEEETTEEEEEEEEEEES........TCTEEEEE-GGGTTSSHHHHHHHH..TT....SEEEEEEEEE..THHHHHHHHHHTT CS
  Acetyltransf_7   4 evfVaeddgkivGfialslld........aeitrlaVdpeyrgkGiGraLlea..ae....kgiileqlel..naekaikfYeklG 73 
                     +++ +e+++k+vG++++ l+          +++ l++ p +rgkG+G+ Ll +  +e     g +l  + l  n +kai+ Yek G
      EPX71279.1  57 YCLFVEENEKPVGMAIYFLNFstwtgrvgIYLEDLYIQPTHRGKGYGSFLLSYlaREslriGGKRLDWVVLdwN-QKAIDVYEKAG 141
                     45558********999888889887776555555******************7541133332222333444322.49*******88 PP

>> FR47  FR47-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   0.0   4.8e-10   1.7e-06      23      80 ..      87     145 ..      80     153 .. 0.83

  Alignments for each domain:
  == domain 1  score: 27.9 bits;  conditional E-value: 4.8e-10
                 SEEEEEE-GGG-SSSHHHHHHHHHHHHHHH.S-S-EEEEEETT-HHHHHHHHHHT-EEE CS
        FR47  23 elgalqvlpehrrrGlgsrlvkalakeiae.rgktvllvvvasNtpsirlyeklGfeki 80 
                 +l  l+++p+hr++G+gs l + la+e  +  gk +  vv   N+++i +yek G +ki
  EPX71279.1  87 YLEDLYIQPTHRGKGYGSFLLSYLARESLRiGGKRLDWVVLDWNQKAIDVYEKAGAKKI 145
                 57789********************998884667777777777************9988 PP

>> Acetyltransf_10  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.0   5.5e-10     2e-06      28     107 ..      53     143 ..      25     151 .. 0.83

  Alignments for each domain:
  == domain 1  score: 27.8 bits;  conditional E-value: 5.5e-10
  Acetyltransf_10  28 egealllvaeeggkivGviel.rdgs........hisllfVdpeyrgqGigkaLleaveeeaekdgikl..eltvnaspyavpfYeklGFk 107
                      ++ a++l +ee++k+vG++ +  + s        +++ l+++p +rg+G+g+ Ll ++ +e  + g+k    + ++ +++a+++Yek G k
       EPX71279.1  53 NPTAYCLFVEENEKPVGMAIYfLNFStwtgrvgiYLEDLYIQPTHRGKGYGSFLLSYLARESLRIGGKRldWVVLDWNQKAIDVYEKAGAK 143
                      677889999**********555555566677888***************************778888877667777777********9966 PP

>> Acetyltransf_3  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.0   3.4e-09   1.2e-05       3     138 .]       6     143 ..       4     143 .. 0.74

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 3.4e-09
  Acetyltransf_3   3 lLrplteeDlealfe.lrsdpevmrylpepltleeaeewlera..waeeseeegygwaivlkdtgviGsvglr.dleeedee..aelg.ymlaps 90 
                      +rp+t +D+ ++ + + +  ++++       +e++ee l ++  ++e+s+ ++y++ ++++++  +G++ ++ +++ ++++  + l+ ++++p 
      EPX71279.1   6 RVRPITNKDISTVIQfIIELADFEE---ARDQVEATEESLLNVfgFNENSNPTAYCLFVEENEK-PVGMAIYFlNFSTWTGRvgIYLEdLYIQPT 96 
                     6899*****9999883445444555...344566666666666567777777778877755555.79*995553677777655533335789999 PP

  Acetyltransf_3  91 fwgkGyateavralleyafeelglerlvavidkeNeaSirvleklGfe 138
                     ++gkGy++  ++ l +    + g +rl +v+   N++ i v+ek+G +
      EPX71279.1  97 HRGKGYGSFLLSYLARESL-RIGGKRLDWVVLDWNQKAIDVYEKAGAK 143
                     ********99999999884.556999********************75 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       373  (0.0208043); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.43
# Mc/sec: 1184.34
//
Query:       EPX71280.1  [L=111]
Description: bouquet formation protein Bqt2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.015   15.3   0.0      0.017   15.2   0.0    1.1  1  TERB2     Telomere-associated protein TERB2


Domain annotation for each model (and alignments):
>> TERB2  Telomere-associated protein TERB2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.0   9.6e-07     0.017       1      53 [.       2      58 ..       2      74 .. 0.88

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 9.6e-07
       TERB2  1 FksqraWFssSvskdltelWvkegGk...ivd.wdqAdflFSsDashpDTariyese 53
                F+++ a+F + v+ +l+ lW+ ++G+   + + +++ d+ FS  a  +  ++iye+ 
  EPX71280.1  2 FRGKCAYFDETVPSHLIALWQIHNGTakfLPEgYHKFDYAFSMNAGKKVRLSIYETL 58
                999**********************833334478999*****************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       237  (0.0132188); expected 358.6 (0.02)
Passed bias filter:                      224  (0.0124937); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.45
# Mc/sec: 745.95
//
Query:       EPX71281.1  [L=699]
Description: histone demethylase Jmj2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-40  138.4   0.2    4.8e-40  136.5   0.2    2.1  1  JmjC      JmjC domain, hydroxylase
      2e-14   53.2   4.1    2.7e-14   52.8   2.5    2.1  2  JmjN      jmjN domain
      1e-11   45.0   9.7      1e-11   45.0   9.7    2.0  2  zf-C5HC2  C5HC2 zinc finger
    6.9e-06   26.6   0.0    1.5e-05   25.6   0.0    1.6  1  ARID      ARID/BRIGHT DNA binding domain


Domain annotation for each model (and alignments):
>> JmjC  JmjC domain, hydroxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.5   0.2   1.1e-43   4.8e-40       1     114 []     433     549 ..     433     549 .. 0.98

  Alignments for each domain:
  == domain 1  score: 136.5 bits;  conditional E-value: 1.1e-43
                 EEEEE-TT-EEEEE--GGG-EEEEEEEEES-EEEEEE-GGGHHHHHHHHHHH...HHCCSTTGCCTTTCEE-HHHHHHTT---EEEEE-TT-EEEE-TT CS
        JmjC   1 wlylgmpksttpwhiedqglySinylhfgapkvWyiipeekkeklekvlskk...nskeqpdllrhkstlispkqlekegipvyrfvqkpgefVfvfpg 96 
                 wly+gm++st++wh+ed+ +yS+ny+h g++k Wy+ip+++++k+e+++++     s +qpdll++++ + +pk+l k g++vy + q p++fV++fp+
  EPX71281.1 433 WLYIGMCFSTFCWHVEDNYTYSANYQHSGETKLWYGIPGNDASKFEEAAHEIapdLSSSQPDLLYQLAAMANPKELTKRGVKVYYVDQTPNDFVVTFPK 531
                 9*********************************************999999999889***************************************** PP

                 -EEEEEESSSEEEEEEEE CS
        JmjC  97 ayHsvfnlgfniaeavnf 114
                 ++H ++nlgfni+eavnf
  EPX71281.1 532 CFHGGINLGFNINEAVNF 549
                 *****************9 PP

>> JmjN  jmjN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.8   2.5     6e-18   2.7e-14       1      34 []      61      94 ..      61      94 .. 1.00
   2 ?   -2.6   0.0       1.2   5.6e+03       6      20 ..     633     651 ..     633     652 .. 0.79

  Alignments for each domain:
  == domain 1  score: 52.8 bits;  conditional E-value: 6e-18
                -EE---HHHHC-HHHHHHHHHHHHCCCSEEEE-- CS
        JmjN  1 PvFyPTeeEFkdplkYiekieplgekyGIcKIvP 34
                P+FyPT eEFkd ++Yi+ki p ++++GI+KIvP
  EPX71281.1 61 PTFYPTDEEFKDAIRYIQKITPVAKEFGIVKIVP 94
                9********************************9 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.2
                 -HHHHC....-HHHHHHHH CS
        JmjN   6 TeeEFk....dplkYieki 20 
                 T e+++    + ++Y +ki
  EPX71281.1 633 TDEQWQcvycNAYSYFSKI 651
                 6677877777899999998 PP

>> zf-C5HC2  C5HC2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.7   1.8         4   1.8e+04      22      35 ..     300     312 ..     288     319 .. 0.50
   2 !   45.0   9.7   2.3e-15     1e-11       1      53 [.     639     689 ..     639     690 .. 0.95

  Alignments for each domain:
  == domain 1  score: -4.7 bits;  conditional E-value: 4
    zf-C5HC2  22 vvCleHakelckec 35 
                 v Cl   ++ ck+c
  EPX71281.1 300 VECLG-KESYCKDC 312
                 55555.35555555 PP

  == domain 2  score: 45.0 bits;  conditional E-value: 2.3e-15
    zf-C5HC2   1 CslCkaycYlSavvckkcpskvvCleHakelckecppknrvllyRytdeeLea 53 
                 C++C+ay Y+S +vc+ c+s v+C +H+++lc +c+ ++++l +R  d+eL +
  EPX71281.1 639 CVYCNAYSYFSKIVCP-CTSLVACTKHMEKLC-DCKIEKKTLQIRIRDTELLN 689
                 ****************.66*************.6****************976 PP

>> ARID  ARID/BRIGHT DNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.0   3.3e-09   1.5e-05       9      90 .]     135     213 ..     127     213 .. 0.82

  Alignments for each domain:
  == domain 1  score: 25.6 bits;  conditional E-value: 3.3e-09
                 HHHHHHHTTS.SSS----SSSS-STTHHHHHHTTTSSHHHHTT...CHHHHHHHHHTS-..-.......HHHHHHHHHHHHHHHH CS
        ARID   9 Lkqfhenrgt.lkkiPviggkevdlykLyraVikrGGfrkvtq..knkWeevaqklglpredpeasesvaqalksiYeryLlpyE 90 
                 ++++  n+g+ l++i  i++ +vdly++ +    r Gf k  +  k+ W++v+  ++lp++    s  +++++ +iY +y++p+E
  EPX71281.1 135 VYRYFCNKGIeLPQIFIIANTTVDLYQIRNSLE-RLGFSKGAAipKECWRRVLVSMNLPNT----S-GAEKEIMTIYSKYIAPFE 213
                 556666788877778889**************9.66777765566889**********853....3.7899*************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (699 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       824  (0.0459591); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.63u 0.26s 00:00:00.89 Elapsed: 00:00:00.43
# Mc/sec: 4862.62
//
Query:       EPX71282.1  [L=201]
Description: transcription factor TFIID complex subunit Taf11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.1e-39  132.6   0.0    6.3e-39  132.0   0.0    1.3  1  TAFII28   hTAFII28-like protein conserved region


Domain annotation for each model (and alignments):
>> TAFII28  hTAFII28-like protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.0   0.0   3.5e-43   6.3e-39       2      85 ..      98     181 ..      97     182 .. 0.99

  Alignments for each domain:
  == domain 1  score: 132.0 bits;  conditional E-value: 3.5e-43
     TAFII28   2 LlenfdeeqlnRYevfrrsklnkaavkklvnsvlsqsvsqnvaivvaglaKvFvgeiveeArevqeeweesgplqpehlreayr 85 
                 Ll++fdeeq++RYevfrr++lnk++vkkl+n++l+qsv+ nvaiv++g++KvFvge++e Ar++q++w++sgpl p+hlreayr
  EPX71282.1  98 LLDSFDEEQMQRYEVFRRANLNKTNVKKLANQILNQSVTPNVAIVISGFSKVFVGEMIELARKIQDHWGDSGPLSPDHLREAYR 181
                 89********************************************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1128  (0.0629148); expected 358.6 (0.02)
Passed bias filter:                      560  (0.0312343); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1468.67
//
Query:       EPX71283.1  [L=919]
Description: glucosidase II Gls2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   2.7e-133  445.4   1.8   3.8e-133  444.9   1.8    1.2  1  Glyco_hydro_31   Glycosyl hydrolases family 31
    1.4e-22   79.8   1.2    6.4e-22   77.6   0.3    2.6  2  Gal_mutarotas_2  Galactose mutarotase-like
    5.8e-07   29.7   0.2    1.6e-06   28.2   0.2    1.8  1  DUF5110          Domain of unknown function (DUF5110)


Domain annotation for each model (and alignments):
>> Glyco_hydro_31  Glycosyl hydrolases family 31
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  444.9   1.8  6.4e-137  3.8e-133       1     440 []     343     789 ..     343     789 .. 0.93

  Alignments for each domain:
  == domain 1  score: 444.9 bits;  conditional E-value: 6.4e-137
                     EEEE-SSHHHHHHHHHHHH-------GGGGSEEEE-TT--SHHHHHHHHHHHHHTT--EEEEEESCGGSBTTCCTB-.TTTSS-HHHHHHHHHHT CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_31   1 yvflGptpkevvkqyteltGrpalpPrwalGfhqsrygykdeeeveevvdkfreagiPldvivlDidymdkrkdftwdkerFpdpkemvdelhek 95 
                     +++lGpt  +v k y+ ltGr++lpP ++lG+hq+r++y +ee+v++v ++f+e ++P+d+i+lD+dy + r++ftw++ +Fp+p+e +++l ++
      EPX71283.1 343 FIYLGPTALDVYKAYSGLTGRTQLPPLFSLGYHQCRWNYFSEEDVQDVDNTFNEVDMPYDAIWLDVDYTSGRRYFTWNEATFPHPQETLKKLDSN 437
                     89******************************************************************************************999 PP

                     T-EEEEEE-SEE.E.-TTSHHHHHHHHTTSBECCCCCS..TCEC.TSSEEEEB-TTSHHHHHHHHH.HHHHHHCT..CT--EEEE-STTTB.SCC CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxx.xxxxxxxxxxxxxxxxxxxxx.xxxxxxxx..xxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_31  96 gvklvvivdpaiskqeeeyeafdegkekgvflknkdgs..ykgk.wpgstafpDftnpearewwkk.elkkflld..lgvdglwiDmnepsnfee 184
                     g k+vvi+dp+i+ ++++y + +e+ e+++ +k+++g   y+ + wpg++ ++Df+n e ++ww++ + ++++ +   +  ++w+Dmneps+f+ 
      EPX71283.1 438 GRKMVVILDPHIK-NDPNYFVSKELIENDFAVKDSSGVdnYNAEcWPGDSIWVDFFNLEGQKWWGDlYSYDKF-KgsDKNLFIWNDMNEPSVFKG 530
                     ************5.589****************988889877779********************73333333.34455668*********9876 PP

                     CCHHHHCCCTSCETTCC..HHHHCCCHHHHHHHHHHHHHHHHTT.TST-EEEESSEETTGGGCTEEE--S-BSSHHHHHHHHHHHHHHHTTT--S CS
                     xxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_31 185 gsdseekeaketkaags..hydvhnlygllmakatyeglkekkp.kkrpfiltRstfaGsqryaahWsGdnassWeslresipallsfslsGvpf 276
                     +++s   ++++  ++g   h+d+hn yg++  ++tyeg+ ++++ + rpfiltRs+faG+   aa W Gd+  +We++r s++++l+ +++G+pf
      EPX71283.1 531 PETS---MHRDAIHHGGweHRDIHNFYGHQCINSTYEGMIKRDHgEIRPFILTRSFFAGTNALAASWIGDTLGTWEHFRGSLATVLTNGVAGMPF 622
                     6654...4444456666899****************99988877689***********************999********************** PP

                     EEEECT-SG.HCHHHHHHHHHHHHTTSSSEEE--STTSS--SHHHHCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHH---SEE-HHHH-TT-CC CS
                     xxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_31 277 wgaDigGFe.ntteelyaRWvqlGafsPffrnHsskdakrqepwafgeeveeaarkaielRyrLlPylYtlfyeahetglpvvrplflefpedek 370
                      gaD+ GF+ n++ el++RW++lG+f+Pffr H++ d+kr+epw++ge++++++r+++ +RyrLlP +Yt+f+ +h tglpv+rp fl +pede+
      EPX71283.1 623 SGADVAGFFgNPDSELFVRWYELGIFYPFFRAHAHIDTKRREPWLYGEPYTSMIRNLLGIRYRLLPTWYTTFHTTHMTGLPVLRPQFLVHPEDEQ 717
                     *********9************************************************************************************* PP

                     CCC--S-EEETTT.EEE----STT-SEEEEEE-.SSEEEETTT--EEESSEEEEEE--TTSS-EEEETTEEE CS
                     xxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_31 371 tfdiddqfmfGds.LLvaPvleeeatsvevyLP.ggkWydfwtgekyeggqtveltapldeiplfvraGaIi 440
                      fdiddqf++Gds LLv+Pvle++ t++ vy+  g+++y f++ ++++g+ ++ + a+l +ip+++r+G+I+
      EPX71283.1 718 GFDIDDQFYLGDSgLLVKPVLEPGVTETGVYIAdGETYYYFYNFDEIKGKGKHVVPATLGKIPILLRGGNIL 789
                     ************99*******************888***99999*****554445555778*********97 PP

>> Gal_mutarotas_2  Galactose mutarotase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.6   0.3   1.1e-25   6.4e-22       2      66 .]     246     321 ..     245     321 .. 0.98
   2 ?   -1.1   0.0      0.41   2.4e+03      18      35 ..     413     430 ..     411     437 .. 0.82

  Alignments for each domain:
  == domain 1  score: 77.6 bits;  conditional E-value: 1.1e-25
                      -EEEEEES-SS-SS-TTE.........EEEE-----TS-HCC.CTS-SCEEEEEEEE..TCEEEEEE--SSSEEEE CS
  Gal_mutarotas_2   2 ehvyGlGEkagplnlrgt.........ryrlwntdafgyeaessdplYgsiPfmisl..segyGvfvdnpaetwfD 66 
                      +hvyG +E++ +l+l++t         +yrl+n+d f+ye +s+++ Yg+iPfm ++  ++ +G+f+ n+a tw+D
       EPX71283.1 246 KHVYGVPEHTSSLSLKETnnsetgytdPYRLYNVDIFEYEVDSPMSQYGAIPFMQAHkrNSDVGIFWSNAAATWID 321
                      79*********************************************************888*************9 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.41
                      TEEEEE-----TS-HCC. CS
  Gal_mutarotas_2  18 gtryrlwntdafgyeaes 35 
                      g+ry  wn+  f + +e+
       EPX71283.1 413 GRRYFTWNEATFPHPQET 430
                      899*********998885 PP

>> DUF5110  Domain of unknown function (DUF5110)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.2   0.2   2.7e-10   1.6e-06       3      40 ..     808     848 ..     806     869 .. 0.85

  Alignments for each domain:
  == domain 1  score: 28.2 bits;  conditional E-value: 2.7e-10
                 EEEEE...--TTSEEEEEEE-SSSSCCCCTBEEEEEEEEEC CS
     DUF5110   3 tldvy...gggegsftlYeDDGetydYekGeyaktkftvea 40 
                 tl +    ++g+++ +lY DDG++++Y+kG+y   +ft+++
  EPX71283.1 808 TLYIAvsgKTGSARGELYMDDGTSFEYKKGAYISREFTFNE 848
                 5555576667778899**********************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (919 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       330  (0.0184059); expected 358.6 (0.02)
Passed bias filter:                      283  (0.0157845); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.67u 0.27s 00:00:00.94 Elapsed: 00:00:00.44
# Mc/sec: 6235.15
//
Query:       EPX71284.1  [L=226]
Description: nucleoporin Pom34 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.8e-15   55.8   0.0    1.1e-13   51.3   0.0    2.1  1  NPCC          Nuclear pore complex component
  ------ inclusion threshold ------
       0.12   12.4   0.0       0.22   11.6   0.0    1.4  1  Spore_III_AF  Stage III sporulation protein AF (Spore_III_AF)


Domain annotation for each model (and alignments):
>> NPCC  Nuclear pore complex component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.3   0.0   1.3e-17   1.1e-13       1     114 [.      96     203 ..      96     222 .. 0.84

  Alignments for each domain:
  == domain 1  score: 51.3 bits;  conditional E-value: 1.3e-17
        NPCC   1 GswenPvlkeilrR...qvnkErevkriiaNvllllvfnlikklvklllklyelkkksseeslasalyaelveklirllfllniviallkLlrkqdkia 96 
                 G w++Pv++ +++R   q+ ++r   r+i N+++l+ f+++k ++ +                     +  ++ ++++l+llni+ a+++ +r + + +
  EPX71284.1  96 GYWKHPVVDTVSKRlhdQIPTDRTWSRMISNLFALICFQFLKCFLPKTN------------------SIRFASWALQFLLLLNILEAFWQFIRPRPTFD 176
                 89************5555777*****************99998887777..................67889999************************ PP

        NPCC  97 DlpLtekQrellGLkad.........e 114
                 Dl+L+++Qr+llGL ++         +
  EPX71284.1 177 DLKLSPNQRKLLGLPPAdpnsthitgP 203
                 ***************994433333330 PP

>> Spore_III_AF  Stage III sporulation protein AF (Spore_III_AF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   2.4e-05      0.22       3      51 ..     129     177 ..     127     188 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2.4e-05
  Spore_III_AF   3 ivllatfvemlLPnkkmkkYvklvlGLllilailsPvlsllnkdldlel 51 
                   +++   f++  LP+ +  +++   l +ll+l il+ + +++++ ++++ 
    EPX71284.1 129 ALICFQFLKCFLPKTNSIRFASWALQFLLLLNILEAFWQFIRPRPTFDD 177
                   678889***********************************98887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       414  (0.0230911); expected 358.6 (0.02)
Passed bias filter:                      286  (0.0159518); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.31s 00:00:00.81 Elapsed: 00:00:00.50
# Mc/sec: 1371.96
//
Query:       EPX71285.1  [L=157]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-18   67.1   0.0      2e-18   66.6   0.0    1.3  1  FLILHELTA  Hypothetical protein FLILHELTA


Domain annotation for each model (and alignments):
>> FLILHELTA  Hypothetical protein FLILHELTA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.6   0.0   1.1e-22     2e-18       2      85 ..      58     135 ..      57     137 .. 0.91

  Alignments for each domain:
  == domain 1  score: 66.6 bits;  conditional E-value: 1.1e-22
   FLILHELTA   2 llkrlPkflrkytrklrsapvshvtsFLiLHElTAivPllglfalfhyldleedeellpaalvseaveegverferylrkkgwf 85 
                 l++r+ k + k + +++++p+s+ ++FL+LHElTAi+Pl ++f+lfh+ld      + p  l +e++e+g+ +++r+++k+g++
  EPX71285.1  58 LWNRCLKLAGKQAGSFKDKPLSYAVAFLFLHELTAILPLPAFFFLFHSLD------WTPPGLPTEYLEKGAGVASRIFEKIGYN 135
                 789*********************************************54......55554556******************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       330  (0.0184059); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.27s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 1095.50
//
Query:       EPX71286.1  [L=517]
Description: meiotically upregulated Mug99 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (517 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1342  (0.0748508); expected 358.6 (0.02)
Passed bias filter:                      576  (0.0321267); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.74u 0.35s 00:00:01.08 Elapsed: 00:00:00.57
# Mc/sec: 2738.84
//
Query:       EPX71287.1  [L=702]
Description: poly(A) binding protein Crp79 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      3e-32  110.2   0.2    5.4e-15   55.0   0.0    4.5  4  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
     0.0011   19.1   0.0     0.0068   16.5   0.0    2.3  2  RRM_7     RNA recognition motif
     0.0028   18.0   0.3       0.01   16.1   0.3    2.0  1  DUF4969   Domain of unknown function (DUF4969)


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0   5.6e-08   0.00034       1      28 [.      19      46 ..      19      50 .. 0.94
   2 !   11.9   0.0   2.6e-05      0.15      15      69 ..      50     100 ..      48     101 .. 0.85
   3 !   17.8   0.0   3.7e-07    0.0022       1      69 [.     212     280 ..     212     281 .. 0.93
   4 !   55.0   0.0     9e-19   5.4e-15       1      69 [.     388     459 ..     388     459 .. 0.94

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 5.6e-08
                EEEESETTTSSHHHHHHHHHTTSCEEEE CS
       RRM_1  1 lfVgnLppdvteeeLkelFskfGpiksi 28
                +++gnL + v++ee+  lFsk+G+++s+
  EPX71287.1 19 IYIGNLDSRVSDEEIINLFSKYGQVVSL 46
                8************************875 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 2.6e-05
                 HHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1  15 LkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 L + F + ++ k++k +r+       ++f++F +++  e+ l+   g+ lg+r+l
  EPX71287.1  50 LLDSFYPKEKSKTFKPPRN----GVQYGFIRFSTRDGVEAVLKDAKGMVLGKRKL 100
                 5667777777777777775....889**************************998 PP

  == domain 3  score: 17.8 bits;  conditional E-value: 3.7e-07
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 l V n+p ++t  +L+  F+ +G +k   ++   ++k  +++ V ++s e+ ++A+  l g +++g++l
  EPX71287.1 212 LTVMNIPAEMTPIDLYNCFKSIGTVKGTAVSQFTDQKGYRYGEVIMDSLEACKSAIHILGGSQYNGSKL 280
                 5799*********************9988888788999***************************9986 PP

  == domain 4  score: 55.0 bits;  conditional E-value: 9e-19
                 EEEESE..TTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnL..ppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrel 69 
                 l+V+nL  +   t+++L++lFs+fG i+s  l +  + g skg++fV F+  e+A +A+++lng ++g++++
  EPX71287.1 388 LYVKNLddTVISTKDQLEALFSPFGNITSSMLACYpNSGISKGYGFVAFHRIEEAIAAKDRLNGAMIGKKRI 459
                 89****655566********************************************************9986 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   1.1e-06    0.0068       1      85 [.      16     106 ..      16     113 .. 0.81
   2 ?   -1.6   0.0      0.52   3.1e+03      45      59 ..     424     438 ..     400     472 .. 0.62

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 1.1e-06
       RRM_7   1 srkvFvGGlPiDiteeelkatfkefgkvlvdwPkk.....aeskkkaaenskaakgyvflvfedeksvkaLleacteee.eelylklssrr 85 
                 s+ +++G l   +++ee+++ f+++g+v+  + +      +++k+k+ +  +    y f+ f++ + v+a+l++++    ++  l +++r 
  EPX71287.1  16 SCVIYIGNLDSRVSDEEIINLFSKYGQVVSLFRRLldsfyPKEKSKTFKPPRNGVQYGFIRFSTRDGVEAVLKDAKGMVlGKRKLSIKARV 106
                 899************************99888877887775555555556777789****************9987665566666666665 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.52
       RRM_7  45 nskaakgyvflvfed 59 
                 ns   kgy f+ f++
  EPX71287.1 424 NSGISKGYGFVAFHR 438
                 344457888888765 PP

>> DUF4969  Domain of unknown function (DUF4969)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.3   1.7e-06      0.01      44      75 ..     130     161 ..     110     163 .. 0.88

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.7e-06
     DUF4969  44 ddpiklvdengeatvevdvdPkskltidGkav 75 
                  + ik+v+en+  tve +++P s  +++ ka+
  EPX71287.1 130 GNEIKPVTENNSQTVEKKGKPASPKPFNSKAI 161
                 578************************99998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (702 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1072  (0.0597914); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.73u 0.35s 00:00:01.08 Elapsed: 00:00:00.52
# Mc/sec: 4071.49
//
Query:       EPX71288.1  [L=249]
Description: ribosomal protein subunit L1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.4e-25   89.0   0.0    3.8e-25   88.8   0.0    1.1  1  Ribosomal_L1  Ribosomal protein L1p/L10e family


Domain annotation for each model (and alignments):
>> Ribosomal_L1  Ribosomal protein L1p/L10e family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.8   0.0   2.1e-29   3.8e-25      16     203 ..      67     241 ..      29     242 .. 0.89

  Alignments for each domain:
  == domain 1  score: 88.8 bits;  conditional E-value: 2.1e-29
                   EEEESSS-TTSGGG--EEEEE-STSTSSCS-EEEEE-HHHHH...HHHHTT..-SEEETCHHHHHHT-HHHHHHTCCH-SEEEEEGGGHHHHHHHCH CS
  Ribosomal_L1  16 alnlttkkpkkadqrkpgkipLphplgkevkiclitkdpqaeyakeakeagriakviglkklkkkyksfeakrkllkefdlfladdrimpllpklLG 112
                    l + ++++++    ++gk+  php+++  kic+++ ++ +    ea e+g  a++ g+++l +k+       ++  ef  +la+++  +llpk + 
    EPX71288.1  67 VLSV-GLRTRRGLPPVRGKVLFPHPFHEIPKICVLAVGDAER---EALEHG--ATYAGGENLVQKI------IAGEIEFSKCLAHPSASHLLPK-VA 150
                   5666.7788888888************************999...9*****..*************......99********************.** PP

                   HHHGGGT-S-ECC..CT.BTS-HHHHHHHHCTTEEEEE-TTTSEEEEEEEETTSSHHHHHHHHHHHHHHHHHTSTTT....SGSEEEEEEEETTS CS
  Ribosomal_L1 113 kvfgkrkkmPipvltkgtvkedvkkevekalkstvvvrldkgtclsvkvGklsftaeelaeNieavvkalvekvpkk....wkniksiylkttms 203
                   k++g+++++P+ +  +gt+ e++  +ve a+k  + +r + ++++++++Gkl+ +++ l +Niea+++++ +++ +     + +ik+ +l  +++
    EPX71288.1 151 KILGPKHLLPTTK--RGTIVEEIGPAVEAAMK-MTDYR-EANGVINIPIGKLDYDDKLLQDNIEALLNSIRNHISQLstkvKVSIKNTHLFASNT 241
                   *************..***8889**********.66***.**********************************8877556777777777766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       635  (0.0354175); expected 358.6 (0.02)
Passed bias filter:                      608  (0.0339115); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.31s 00:00:00.87 Elapsed: 00:00:00.49
# Mc/sec: 1527.83
//
Query:       EPX71289.1  [L=299]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      9e-21   74.5   0.6    3.1e-18   66.2   0.8    2.8  2  Voldacs   Regulator of volume decrease after cellular swellin
  ------ inclusion threshold ------
      0.053   12.9   0.0      0.072   12.4   0.0    1.1  1  DUF1343   Protein of unknown function (DUF1343)


Domain annotation for each model (and alignments):
>> Voldacs  Regulator of volume decrease after cellular swelling
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.24   2.1e+03       9      27 ..      29      46 ..      24      46 .. 0.73
   2 !   66.2   0.8   3.4e-22   3.1e-18       2     121 ..      57     260 ..      56     276 .. 0.78

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.24
     Voldacs  9 rllwvsekansgisipyps 27
                ++l++ e+an +++i++p+
  EPX71289.1 29 EILFF-EDANVNYKIDFPC 46
                56666.669*******996 PP

  == domain 2  score: 66.2 bits;  conditional E-value: 3.4e-22
     Voldacs   2 dLyvtesrllwvsekansgisipypsIalHAiqrdkkdeqeepclyvqldeeldesdn......................................... 59 
                 ++y+t+++++++++++n g++ipy+ I+lHA q     ++++p +y+ql+ +l  + +                                         
  EPX71289.1  57 NVYITSKSFILFDSEQNFGWRIPYKLITLHAKQ-----SNPKPFVYLQLEGDLMSLCSckttseeeeflrkgivgkngekivivdihgsllhanassms 150
                 69***********99******************.....6899********99988877*****************999999999888888877777777 PP

     Voldacs  60 .....................................................keseegededdneededeeessveltlvPknaeetildnifealsa 105
                                                                        + +++++ ++ ed+   +   e+tl  ++      d++++al+a
  EPX71289.1 151 endfksmsityttpvtallqdqsgnvyrsknmnelsnlysclfgqeppfqingAGEFSETNDASEIEDDTAWSPVFEITLFLSD-----FDTCYQALCA 244
                 777777777777777777777777777777777777777777777777766333333333333333444444555677777777.....79******** PP

     Voldacs 106 cqelhpdpdeeddeed 121
                 cq+lhpdp ++++++d
  EPX71289.1 245 CQSLHPDPLSDEEQDD 260
                 *********4444444 PP

>> DUF1343  Protein of unknown function (DUF1343)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   8.1e-06     0.072     180     278 ..     151     250 ..     141     277 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 8.1e-06
                 T--HHHH--S-S-SSTT--SCCHHHHHHHHHHHHCTSS.B-STTSSSTTSEEEETT-SHHHHHHHHHTT--TTEEEECEEE--SSSTTTTS-EEEEEEC CS
     DUF1343 180 smlydetglpwvkPSPnlptleaallYpglclfEgtnv.seGrGttrpFeviGapwldakklaeelnalklpgvkfrpvsftpteskhkgetceGvqle 277
                 ++ +++++++++ P   l ++++ ++Y +  + E  n+ s   G++ pF++ Ga  +++++ a+e+++ +  +  f+ + f   ++++ + +c    l+
  EPX71289.1 151 ENDFKSMSITYTTPVTALLQDQSGNVYRSKNMNELSNLySCLFGQEPPFQINGAGEFSETNDASEIEDDTAWSPVFEITLFLSDFDTCYQALCACQSLH 249
                 46689999**************************988747789*************9888889999999999999999999999999999999998888 PP

                 E CS
     DUF1343 278 v 278
                  
  EPX71289.1 250 P 250
                 3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (299 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       458  (0.0255452); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.48
# Mc/sec: 1880.14
//
Query:       EPX71290.1  [L=890]
Description: dymeclin 3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.8e-163  545.7  18.7   2.2e-163  545.5  18.7    1.0  1  Hid1      High-temperature-induced dauer-formation protein
    7.2e-75  252.6  14.3    8.9e-75  252.3  14.3    1.0  1  Dymeclin  Dyggve-Melchior-Clausen syndrome protein


Domain annotation for each model (and alignments):
>> Hid1  High-temperature-induced dauer-formation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  545.5  18.7  2.4e-167  2.2e-163       1     807 [.       1     842 [.       1     843 [. 0.89

  Alignments for each domain:
  == domain 1  score: 545.5 bits;  conditional E-value: 2.4e-167
        Hid1   1 MgasesklafkkaifrLgekrliaeddayweefWelpesteDvFeLltpadirkvRdenleNletLilavierlvelakhpsfpdpeqapeseaLnCvR 99 
                 Mg +esklaf+++i rL +++ i+ dd  w +fW  pes+ +v++ l p+ ir++R+ ++eN+e L+l++++rl +l+++++fp+ e ap s+aLnC+R
  EPX71290.1   1 MGGQESKLAFQRGIGRLADDSDIPLDDDVWVSFWSIPESAAEVYSFLHPDLIRRIREFQFENIEKLLLVLTSRLFALKNNKQFPNVESAPASDALNCIR 99 
                 9************************************************************************************************** PP

        Hid1 100 lLtrllPfifEeesleewedklfWssrkkpkrkaqvasevledesssee........................................eeeeekekpl 158
                 +Ltr++P + E+ +l +w++k+ Ws rk+++r ++++   l + +s  e                                        ++ +  ek l
  EPX71290.1 100 VLTRVIPLLDEQSNLRHWNQKFWWSLRKRKMRSTESSELDLASFTSAFEkelstktehdvpftgsssiqpasgdsaaqepssrklgnpvDKSYVYEKTL 198
                 *******************************99986666666655555567999***********************************999******* PP

        Hid1 159 aeelldalvdlLFlkdFTvpapksskskveysiWesGvgtatklps.nkeiesnRtEvLklLLtlfsetlYrspsevssngskvltylvssdnrqevlt 256
                 +eell++l++l+F+++FT+p+   s ++ ++ iW  G+g +++  +  k++ snRtEvL+l++ l+s+ +Y+     ++  s +ltyl+  +n+q  l+
  EPX71290.1 199 MEELLNTLCNLMFCRGFTLPEE--SPEQFTFRIWDKGIGSQESASKlPKNLLSNRTEVLRLIMILISNRVYQD----EESNSHTLTYLTYFSNKQFSLI 291
                 ********************99..77778888**************99*************************....567899**************** PP

        Hid1 257 LlcSLlntvcrydpsgsglpynsvvlkdsrellVeyclqlLlvlldypipedeklseevkterts.skpkNlfriylgrlhreqdfqFlldgltriLnq 354
                  l SL+nt+++    +  + y++++++d    l +++ q+Ll+  dy  ++ +++++  k ++   s  +N +r y++rlh ++d++Fl+d   r+Ln 
  EPX71290.1 292 FLYSLINTAINLRAESRKIAYSNLLSNDASGSLSKLACQVLLIFWDYTASKASTQYFLRKYNLPLdSHVENQYRAYFSRLHLQKDYEFLVDNCCRLLNV 390
                 ******************************************************99998888754599*****************************98 PP

        Hid1 355 plq.ssylpnsqksvkfaqelliLlwellqcNkrFrsfviessrvldllvlilyylveyrsdqskkglvkicvfillllSseknfgkrLnkpfeaqesl 452
                  l  +sylp sqk++  ++el+ L+w+++ +N+rFr ++  ss++ d+lv i +y++ yr+++++ glv++c+fi+ +lSsek  +++Ln p  + ++l
  EPX71290.1 391 QLPiTSYLPLSQKPSIHYPELILLVWQAILYNNRFRAYLTTSSYASDFLVAIQFYALRYRDEPKYSGLVQLCLFIVHYLSSEKVLCEKLNRPCLNSQTL 489
                 77677******************************************************************************************99** PP

        Hid1 453 ptsiripv.ftgtyaDfliisihkllttgkeklsslvdtLleiLvnispylktLsleacskllqLlesfSspsfLlanesNhkllalllealnnviqkq 550
                  ts+ i+  +t +ya+f+i+s  ++ +     +ssl +++l +L+nisp+l++Ls  +c+kl++L+ s+Ssp fL+ n++Nh ll++ll+a+ n+++ +
  EPX71290.1 490 LTSLGISAlSTISYAEFIIVSSFHITAVKGSPHSSLSPLILLTLCNISPFLEKLSFPTCTKLMHLFFSLSSPRFLIRNPRNHLLLEYLLQAFANILENK 588
                 ******863688*************9999999******************************************************************* PP

        Hid1 551 fkgnrnLvYsilrkrkvfealrnltlesaseeiersnesarldsideeeeenssessrieesrsesrspslsevpelksslaitddeskaereksates 649
                 f++n+n+ Ysilr ++ f +lr+ltl+sa  e  +s     + + + ++e   +++ + +es+  + +   s+ +++   ++++  +s+++ + +  + 
  EPX71290.1 589 FQENPNFSYSILRLQHKFLSLRSLTLSSALDEERKSSF---SLETSRNDEVFIDKKPTKPESNDLNTNSVDSDLKDFVFLSSASRTNSSSDLSSKLISF 684
                 ****************************9966555554...2233333333333333333333333333334444443333333333333333344444 PP

        Hid1 650 sssqavs.....qlremsekarakesaesteesrqesatskkspsgmsqsaeekftptsewlesWksklpLetiltllkallpkiekiaseegltdese 743
                 s +++ +     + r ms+k r+k +++ +e +  ++ ts+    ++ ++++++++pt++w +sW skl++ +il+ +++ +  + k +s+e+++++  
  EPX71290.1 685 SVPPVLQdvflhEPRVMSKKLRGKIPEGLSEAEMFKRCTSNP-FGKDLETTTNSWIPTEAWFQSWHSKLEMDAILETISQFTLPVFKKISDESVSTDD- 781
                 444444377776899**************9999998888765.5578899****************************99999998888888888885. PP

        Hid1 744 iLkflkdktlvgllpepspikirkfewsalslgWyesllwgviynreenvkkltavgvwndtev 807
                  +kfl++ +l+ +l  p  +++r f w +l + W+e ++w    + +e  + l+++++++d +v
  EPX71290.1 782 AVKFLSESKLKDIL--PRAPNFRYFLWTNLMNEWFEGFIWFCTLDFDE-KGMLGSPNLFSDSKV 842
                 68***********5..7889********************99888777.445788888877765 PP

>> Dymeclin  Dyggve-Melchior-Clausen syndrome protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  252.3  14.3   9.9e-79   8.9e-75       1     626 [.       1     819 [.       1     820 [. 0.88

  Alignments for each domain:
  == domain 1  score: 252.3 bits;  conditional E-value: 9.9e-79
    Dymeclin   1 MGassSklafrkavlqllsktqpidaddafWdqllsfslktptsvqdvfalvepaaeilalrnespgnLatLlrkaveklvelkescssakeqqt..al 97 
                 MG+++Sklaf+   + +l ++  i+ dd+ W +++s    +p s+++v     +   i+  r+ + +n ++Ll +++++l +lk+  + +  + +    
  EPX71290.1   1 MGGQESKLAFQRG-IGRLADDSDIPLDDDVWVSFWS----IPESAAEVYSF-LHPDLIRRIREFQFENIEKLLLVLTSRLFALKN--NKQFPNVEsaPA 91 
                 *********9777.99999999*************7....99999*****9.9********************************..444332224456 PP

    Dymeclin  98 sqalNalrllrrilkyl..........................lerasee................................................. 121
                 s alN++r+l+r+++ l                                +                                                 
  EPX71290.1  92 SDALNCIRVLTRVIPLLdeqsnlrhwnqkfwwslrkrkmrsteS-----Seldlasftsafekelstktehdvpftgsssiqpasgdsaaqepssrklg 185
                 78***************999998888888887777666555550.....155555555555556666666678888888888888999999999999*9 PP

    Dymeclin 122 eedeeeseeaeplaeslllalvdllfcpdftvpsk.......................sdstyalrtellklLlvllseqlysppssadssafnklldg 197
                 ++ +++ + ++ l+e+ll++l++l fc++ft+p +                        +++ ++rte+l+l+++l+s  +y++++s ++++  +l+ +
  EPX71290.1 186 NPVDKSYVYEKTLMEELLNTLCNLMFCRGFTLPEEspeqftfriwdkgigsqesasklPKNLLSNRTEVLRLIMILISNRVYQDEESNSHTL-TYLTYF 283
                 888899999999*********************9456789999***************557***********************77777774.677666 PP

    Dymeclin 198 ktsaenrialplvtsLLntviaydpvdesdagsgvpynhllfsdaaasleplveqslqlLlvlldhdktekavae..ese...staeesNlfrnyLsri 291
                    +++++ l +++sL+nt i+         + ++ y+ ll +da+     l + ++q+Ll+  d+ +++ +++   +++    ++ ++N +r y sr+
  EPX71290.1 284 ---SNKQFSLIFLYSLINTAINLRAE-----SRKIAYSNLLSNDAS---GSLSKLACQVLLIFWDYTASKASTQYflRKYnlpLDSHVENQYRAYFSRL 371
                 ...6777789************9888.....9999***********...*****************99888877786444688777777********** PP

    Dymeclin 292 hreeesdadfkfilkglfrllnntvpseqtylpns..kiqfhqelllllykLlhsNkkfleyvlkrsdvldllvPiLellydaradqsrvgliyillfi 388
                 h ++    d +f +++ +rlln ++p  ++ylp s      + el+ll +  + +N++f++y++ +s + d+lv+i ++    r++++  gl++++lfi
  EPX71290.1 372 HLQK----DYEFLVDNCCRLLNVQLPI-TSYLPLSqkPSIHYPELILLVWQAILYNNRFRAYLTTSSYASDFLVAIQFYALRYRDEPKYSGLVQLCLFI 465
                 ****....***************7776.567*****53445579******************************************************* PP

    Dymeclin 389 LLlLSgdrnfgvrlnkliiksvp.yservpmdisvftgtlgdLlilvlhrlitynhqrlqDkpLhtcllaiLaNvSpylknLsmvasqkLvsLlellsk 486
                 +  LS +++ + +ln++ ++s +  ++  +  +s  t++++ ++i+   ++ + + + ++   L   +l +L+N+Sp+l++Ls  +++kL++L+  ls+
  EPX71290.1 466 VHYLSSEKVLCEKLNRPCLNSQTlLTSLGISALS--TISYAEFIIVSSFHITAVKGSPHS--SLSPLILLTLCNISPFLEKLSFPTCTKLMHLFFSLSS 560
                 *****************88888865777777777..899*****9976666666666666..6************************************ PP

    Dymeclin 487 kwfllsaeakasddlaqelsvneelvrllleilnsiLqyqldgNsnLVYallrkrevfaalanlptdfad............................. 556
                 ++fl+ ++             n+ l+  ll ++++iL +++++N+n+ Y +lr ++ f +l++l+   ++                             
  EPX71290.1 561 PRFLIRNPR------------NHLLLEYLLQAFANILENKFQENPNFSYSILRLQHKFLSLRSLTL-SSAldeerkssfsletsrndevfidkkptkpe 646
                 *********............*******************************************88.333699************************** PP

    Dymeclin 557 ................................................................................................... 556
                                                                                                                    
  EPX71290.1 647 sndlntnsvdsdlkdfvflssasrtnsssdlssklisfsvppvlqdvflheprvmskklrgkipeglseaemfkrctsnpfgkdletttnswipteawf 745
                 ******************************************999999999999999999999999999999999999999999999999988888888 PP

    Dymeclin 557 .......plqnimrvlqvlvpqvekicadkgsldeseilkviqkgtlvgllpvphpilirkYqeeegteefFrpYvW 626
                         ++ i+ +++ +   v k   d +s++++ ++k++++++l+++lp  +    r +   + + e+F  ++W
  EPX71290.1 746 qswhsklEMDAILETISQFTLPVFKKISD-ESVSTDDAVKFLSESKLKDILPRAPNF--RYFLWTNLMNEWFEGFIW 819
                 88888877777999999999999996666.56*****************99987644..333455678889988888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (890 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       390  (0.0217525); expected 358.6 (0.02)
Passed bias filter:                      243  (0.0135535); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.70u 0.35s 00:00:01.04 Elapsed: 00:00:00.51
# Mc/sec: 5290.59
//
Query:       EPX71291.1  [L=714]
Description: glutamate-tRNA ligase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   1.2e-107  359.4   0.0   1.7e-107  359.0   0.0    1.2  1  tRNA-synt_1c    tRNA synthetases class I (E and Q), catalytic
      1e-39  136.2   0.5    2.6e-39  134.9   0.5    1.7  1  tRNA-synt_1c_C  tRNA synthetases class I (E and Q), anti-codo
    5.1e-09   36.4   1.5    1.4e-08   35.0   0.9    2.2  2  GluRS_N         Glutamate--tRNA ligase N-terminal domain
    0.00036   20.7   0.0    0.00089   19.4   0.0    1.6  1  GST_C           Glutathione S-transferase, C-terminal domain
     0.0053   16.1   0.2      0.018   14.4   0.1    1.7  2  tRNA-synt_1e    tRNA synthetases class I (C) catalytic domain
  ------ inclusion threshold ------
       0.01   16.0   0.8      0.057   13.6   0.0    2.4  2  GST_C_3         Glutathione S-transferase, C-terminal domain


Domain annotation for each model (and alignments):
>> tRNA-synt_1c  tRNA synthetases class I (E and Q), catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  359.0   0.0  5.7e-111  1.7e-107       1     313 [.     204     508 ..     204     509 .. 0.99

  Alignments for each domain:
  == domain 1  score: 359.0 bits;  conditional E-value: 5.7e-111
                   S-EEEE---SSSS-BHHHHHHHHHHHHHHHHTT-EEEEEE--SSCCC--HHHHHHHHHHHHHTT---SSEEEEGGGGHHHHHHHHHHHHHTTSEEEE CS
  tRNA-synt_1c   1 kVrtRfaPePtGyLHiGhakaallnylfAknnnGkfilRieDTdperekeeaeesiledlkwlgikwdekptyqsdrfdelkkyaeeLikkGkAYvc 97 
                   kV+tRf+PeP+GyLHiGhakaalln +fAk+++Gk+i+R++DT+p++e++e+++siled+++lg+k+ + +ty+sd++d++++++ e+ik+G+AY +
    EPX71291.1 204 KVVTRFPPEPSGYLHIGHAKAALLNDYFAKKYHGKLIVRFDDTNPSKENAEFQDSILEDIALLGVKP-NVVTYTSDYMDKIHDLCIEMIKSGQAYAD 299
                   79*****************************************************************.88*************************** PP

                   -STHHHHHHHHCCSSHSS-TTTTS-HHHHHHHHHHHHHTTHSTTTS-EEEESSBTTSS.GGGSSTEEEEEEESGGGSBTTTBTSTSEEE-HHHHHHH CS
  tRNA-synt_1c  98 ectkeeleeereeqeklgskerdrydeenlklfeeemkkgkaegekavvRlkideess.vefrDlvrgriklepqeihdlvivksdiyPtYdfavvi 193
                   +++ e++++er+e   + s +r+r++ee+l++f  em+kg++ g k+++R+ki  e++  ++rD+v++r++l p   h+++++k++ yPtYdfa++i
    EPX71291.1 300 DTEVEQMRAERNE--GIPSRYRERPIEESLAIF-AEMNKGSDLGLKNCIRAKISYENPnKALRDPVIYRCNLLP---HHRTGTKYKAYPTYDFACPI 390
                   ***********99..99999*************.79**********************9***************...******************** PP

                   HHHHTT-SEEEEEGGGGCCHHHHHHHHHHTT-S.-EEEEEE--EEETTSB-SHHHHHHHHHTTSSSSTT-TTSCBHHHHHHCTB-HHHHHHHHHHHC CS
  tRNA-synt_1c 194 dDaleeithvlrteefldntpkyiwllealglevppfiheylrlnlekkklSKRklsllvdekqvkewddlreallnflrrlGwtpekerelftree 290
                   +D++e++th+lrt+e++d++p y w+l+a++l+ +++++e++r+n+ +++lSKRkl+ lvd   v +wdd+r+++++++rr+G+t+e+ ++ + +++
    EPX71291.1 391 VDSIEGVTHALRTTEYRDRNPMYQWMLKAMNLR-KVHVWEFSRMNFVRTLLSKRKLTALVDHGLVWGWDDPRFPTVRGVRRRGMTIEALQQYIISQG 486
                   *********************************.*************************************************************** PP

                   CCSSS.EEEEHHHHHHHHHHHHH CS
  tRNA-synt_1c 291 liksfdlnresksleafdrkkLe 313
                    +k+  l+  + s++a ++k ++
    EPX71291.1 487 PSKNI-LTLDWTSFWATNKKIID 508
                   *****.************99776 PP

>> tRNA-synt_1c_C  tRNA synthetases class I (E and Q), anti-codon binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.9   0.5   8.8e-43   2.6e-39       1     174 []     511     688 ..     511     688 .. 0.87

  Alignments for each domain:
  == domain 1  score: 134.9 bits;  conditional E-value: 8.8e-43
  tRNA-synt_1c_C   1 ApRymaVl..dpvkvtienlpegkeeelevplhpknpelgtrkvpfskeiyiereDakrlkpgeevrLkelynikveevekdesgevtelkleyd 93 
                     ApR++aV     vk t++n pe    + ++ +h+knp+lg+r+v +s+ i+ie++Da  l ++eev+L++++n+ v+e+++d+sg+vt lkle++
      EPX71291.1 511 APRHTAVAeeGLVKATLTNGPE-ALYTKDRLKHKKNPNLGSRNVVYSRDILIEQADASALNKDEEVTLMDWGNAYVREISHDTSGKVTALKLELH 604
                     8*******77789******995.66799*************************************************************777666 PP

  tRNA-synt_1c_C  94 g.esleearkkkgiihWvsa.eeaveaevrlYdrLfkeee.de....dfllnpdslkvleeglaepalanlkkgdivQfeRiGyfrvd 174
                        ++   +k++++++W+++ +++v a+++ +d+L+++++ +e    + +l+p+++    +++a++a+++lkkgdivQ eR+Gyf+vd
      EPX71291.1 605 LeGDF---KKTEKKVTWLADtQDKVLADLVDFDYLITKDKlEEeddyKNFLTPKTEFH-ASVYADNAVKDLKKGDIVQIERKGYFIVD 688
                     40255...45555*******6667777********775554444545778******87.8**************************98 PP

>> GluRS_N  Glutamate--tRNA ligase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.0   0.9   4.8e-12   1.4e-08       1      55 []      21      74 ..      21      74 .. 0.94
   2 ?   -2.7   0.0       2.8   8.3e+03      24      41 ..     563     578 ..     560     580 .. 0.65

  Alignments for each domain:
  == domain 1  score: 35.0 bits;  conditional E-value: 4.8e-12
     GluRS_N  1 rfVNasktdasIaieFvDdKkvdkadfdssvkLtdggktivdsedvLnkLaekfP 55
                +fVNa +++ +Ia++F+D+ ++d+ad  s+v+   ++ + ++se+v++ + ek+P
  EPX71291.1 21 EFVNA-SGLGHIATKFEDVSLIDNADMASNVAIDLNDNKSYGSENVVKSFLEKYP 74
                6****.9999***********************77888888999**********9 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 2.8
     GluRS_N  24 kadfdssvkL.tdggktiv 41 
                  ad+   ++L +d++ t  
  EPX71291.1 563 QADA---SALnKDEEVTLM 578
                 4444...559888888765 PP

>> GST_C  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0     3e-07   0.00089      28      86 ..     102     160 ..      96     166 .. 0.94

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 3e-07
                 HHHHHHHHHHHHHHHHTSSSSSTTSSCHHHHHHHHHHHHHHHHTTTTTTTTSHHHHHHH CS
       GST_C  28 lekvaevlsaleeelkkqdylvGdkltlADialvpilnwlqrlglafgqekfpnlkawl 86 
                 + +v + l++l+ +l  ++ +vG  lt+AD a+  +l+ +++  +a+ + +f nl +w+
  EPX71291.1 102 FVEVSNLLAQLDDHLIMRTLFVGYSLTIADMAVWGALKANNMAAGAVRTGQFHNLARWY 160
                 67999*****************************************************8 PP

>> tRNA-synt_1e  tRNA synthetases class I (C) catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.64   1.9e+03      22      38 ..     216     232 ..     211     237 .. 0.83
   2 !   14.4   0.1     6e-06     0.018      76     130 ..     252     305 ..     236     335 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.64
                   --BHHHHHHHHHHHHHH CS
  tRNA-synt_1e  22 ashlGhaRslvafDilr 38 
                   + h+Gha++++  D ++
    EPX71291.1 216 YLHIGHAKAALLNDYFA 232
                   78*******99988765 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 6e-06
                   HHHHHHHHHHHHHHTT----SB--BGGGGHHHHHHHHHHHHHTTSEEE-TTS-EE CS
  tRNA-synt_1e  76 aekfieefkkdleaLnvlkptleprvsekvdeiielvekliekgyaYavsdgdvy 130
                    ++f ++  +d++ L+v++ ++ +  s+++d+i +l  ++i+ g aYa + + ++
    EPX71291.1 252 NAEFQDSILEDIALLGVKP-NVVTYTSDYMDKIHDLCIEMIKSGQAYADDTEVEQ 305
                   567889999********87.89999**********************98754444 PP

>> GST_C_3  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.9e-05     0.057      30      88 ..     106     165 ..      86     175 .. 0.83
   2 ?   -0.6   0.2      0.52   1.6e+03      54      93 ..     626     669 ..     600     673 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.9e-05
                 HCHHHHHHHHHHCHGTSSSSTTS--HHHHHHHHHHHHHHHH...TCC.CC-HHHHHHHHHHHT CS
     GST_C_3  30 pkflkyfekvlkkkgggylvgdklTyADlalfqvldgleea...eal.kkfpklkalyervea 88 
                  + l++++ +l     + +vg +lT+AD+a++ +l++ + a        +f +l+++y  +  
  EPX71291.1 106 SNLLAQLDDHLI--MRTLFVGYSLTIADMAVWGALKANNMAagaV-RtGQFHNLARWYRFMDT 165
                 566777777777..67789********************999743.2589*****99987655 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.52
                 -HHHHHHHHHHHHHHHHTCCCC-HHHH....HHHHHHHTSHHHH CS
     GST_C_3  54 TyADlalfqvldgleeaealkkfpklk....alyervearpkik 93 
                  +ADl+ f++l +  ++e+++++++      +++++v a  ++k
  EPX71291.1 626 VLADLVDFDYLITKDKLEEEDDYKNFLtpktEFHASVYADNAVK 669
                 47888888888888888555777775445558888888877776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (714 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       435  (0.0242624); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.64u 0.27s 00:00:00.91 Elapsed: 00:00:00.47
# Mc/sec: 4534.47
//
Query:       EPX71292.1  [L=1337]
Description: exonuclease II Exo2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-98  327.5   0.1    1.3e-97  326.0   0.0    1.8  2  XRN_N       XRN 5'-3' exonuclease N-terminus
    1.2e-96  324.4   4.0    2.1e-96  323.6   4.0    1.4  1  XRN_M       Xrn1 helical domain
    3.9e-61  206.2   0.1    7.5e-61  205.2   0.1    1.5  1  XRN1_D1     Exoribonuclease Xrn1 D1 domain
    7.2e-30  103.0   0.0    2.5e-29  101.3   0.0    2.0  1  XRN1_D2_D3  Exoribonuclease Xrn1 D2/D3 domain
    2.6e-23   81.9   0.1    5.3e-23   80.9   0.1    1.6  1  SH3_12      Xrn1 SH3-like domain
    0.00053   20.0   0.0     0.0016   18.5   0.0    1.8  1  Xrn1_D3     Exoribonuclease 1 Domain-3


Domain annotation for each model (and alignments):
>> XRN_N  XRN 5'-3' exonuclease N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  326.0   0.0  4.2e-101   1.3e-97       1     242 []       1     226 [.       1     226 [. 0.93
   2 ?   -2.3   0.0      0.79   2.4e+03     138     193 ..     403     457 ..     350     462 .. 0.66

  Alignments for each domain:
  == domain 1  score: 326.0 bits;  conditional E-value: 4.2e-101
                 XXX-HHHHHHHHHSGGGEEE------SSSS-EEEEEEETHHHHHHHHS-SSS-......--SSHHHHHHHHHHHHHHHHHHH-EEEEEEEE------HH CS
       XRN_N   1 mGvpklfrwlserypkivkevieeeeeeekefdnLYlDmNgiihkcshkedkeekelskkpkteeeifkkifkyidrlvkivrprkllylavDGvaPra 99 
                 mG+pk+frw+seryp +++++ie+++  + efdn+YlDmNgi+h+c+hk+    ++ s+ p  eee++ +if+yi++l+++++p+klly+avDG aPra
  EPX71292.1   1 MGIPKFFRWMSERYP-LCSQLIENDR-IP-EFDNMYLDMNGILHNCTHKN----DDHSSPPLPEEEMYIAIFNYIEHLFEKIKPKKLLYMAVDGCAPRA 92 
                 9**************.8888886666.44.*******************4....4557899************************************** PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-BB--------GGGSSTTSHHHHHHHHHHHHHHHHHHHH-GGGGG-EEEEE-TTS-S-HHHHHHH CS
       XRN_N 100 KmnqqRsRRfrsakeakeekeekeelkeelekeekeeeeeeekfdsnvitpGtefmeklsealkafikkklkedpawknlkvilsdaevpGEGEhKime 198
                 KmnqqRsRRfr+ak+a++++ ++e+  e         e  e++fdsn+itpGt+fme++s++l +fi+kk+++d++w+n++vils++++pGEGEhKime
  EPX71292.1  93 KMNQQRSRRFRTAKDAHDARLKAEKNGE---------EIPETRFDSNCITPGTTFMERVSRQLYYFIHKKITNDSNWSNIQVILSGHDTPGEGEHKIME 182
                 ****************999875444333.........346789******************************************************** PP

                 HHHHHHTSTTS-TT-EEEEE---THHHHHHHHHT-SSEEEEEE- CS
       XRN_N 199 firkqrskpeydpntrhviyglDaDLillsLathepniliLree 242
                 +ir+q+++p+ydpntrh++yglDaDLi+l+L++h+p++++Lree
  EPX71292.1 183 YIRTQKAQPDYDPNTRHCLYGLDADLIMLGLLSHDPHFCLLREE 226
                 ******************************************96 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.79
                 -------GGGSSTTSHHHHHHHHHHHHHHHHHHHH-GGGGG-EEEEE-TTS-S-HH CS
       XRN_N 138 eeeekfdsnvitpGtefmeklsealkafikkklkedpawknlkvilsdaevpGEGE 193
                     +f sn  ++  +f+++l++ l+  ++ kl++ +  ++l+v + d +  G+ E
  EPX71292.1 403 DLYLDFPSNLSSADQRFIRHLASDLHLSCA-KLTRVDGVEHLRVAFKDLSFEGDDE 457
                 445578888888999999999999988776.4556778888889888888888655 PP

>> XRN_M  Xrn1 helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  323.6   4.0    7e-100   2.1e-96       1     350 [.     271     670 ..     271     678 .. 0.85

  Alignments for each domain:
  == domain 1  score: 323.6 bits;  conditional E-value: 7e-100
       XRN_M   1 kfdleriiDDfvFlcFFvGNDFLPhlPsLeiregaidlllkvYkkelkklggyltdngevkldrveklvslvgkveekifrkrkeredrkekklakeee 99 
                 k+dleri+DDf+ l+FFvGNDFLPhlP L+i+ega+ l++++Ykk++++ ggy+ + g ++++r e+++ ++++ e+++fr    + +++  +++++ +
  EPX71292.1 271 KYDLERILDDFILLAFFVGNDFLPHLPGLHINEGALALMFNIYKKVMPSAGGYINEHGVINMNRLELILLELENFEKEVFRAEVYESKKQPANEKQSFD 369
                 69*******************************************************************************988877777766666655 PP

       XRN_M 100 askedaaneeaavaeeklseskvak.........................................................saeaeaeaeaeaeaeak 141
                  +k  ++++++  a + ++++                                                             + + e + e+e+e+ +k
  EPX71292.1 370 FQKYLKTFTDDIKALTVSQKE---FyvtirkflssrdlyldfpsnlssadqrfirhlasdlhlscakltrvdgvehlrvafkDLSFEGDDEVEQEEVEK 465
                 555555555554444333222...233578899************************************999996665555323333344444444444 PP

       XRN_M 142 aekekrekaekeleeseeeeeeeDkvrLgeeGykeRYYkekfevsseeieqrrevvqkYveGLcWvlrYYyqGvaSWkWfyPyhyaPFaSDlknladlk 240
                   ++  +    ++++ ++e + eD        +k+ YY++k + s  + +  r + q+YveGL Wvl YYy+G+ SW W+y yhy+P +SD+ +  + +
  EPX71292.1 466 ILEKYDQLPLLDEDQLKQEAGFEDSF----IQWKDAYYRDKVHFSYFDEDALRDMTQRYVEGLQWVLFYYYRGCQSWGWYYNYHYSPKISDVFKGLRSN 560
                 44444444444444444555555543....469**********************************************************9888899* PP

       XRN_M 241 ikFekgspfkpleqLmavlPaaskkalPkayqkLmtdpdSpiidlypedfeidlnGkrvaWqgvaklPfidekrLlealakleeeLteeEkkRNtrksd 339
                 ikFe g+pf+p+eqLmavlP++s++ +P a+++Lm +++Spi d+yp+df +d nGk ++W +v+ +Pfide+rLl+al++ ++ Lt++E++RN  k  
  EPX71292.1 561 IKFEMGTPFRPFEQLMAVLPSRSSELVPPAFRELMFNSESPIKDFYPNDFALDQNGKTASWEAVVIIPFIDERRLLDALHSRDNLLTDNERERNMFKPP 659
                 ***********************************************************************************************9999 PP

       XRN_M 340 vlfvsktskka 350
                 ++f  +++++ 
  EPX71292.1 660 TIFTLAENSQP 670
                 99988877765 PP

>> XRN1_D1  Exoribonuclease Xrn1 D1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  205.2   0.1   2.5e-64   7.5e-61       1     192 []     706     890 ..     706     890 .. 0.98

  Alignments for each domain:
  == domain 1  score: 205.2 bits;  conditional E-value: 2.5e-64
                 SS-TT---GGGS-TTS--STTS-EEEEEE-----SSSS--SS-EEEEEE--------HHHHHHHHBTSEEEESGGG-EEEEEEEEE-SS-EEEEE-..S CS
     XRN1_D1   1 GLlegaklgaealaGFPsLktlpftaeLefhgvnvFqqeSrneSmvvtiedkeenlkleelakeklgkrvfvgyPfLrEakvvavsdelfkyekellee 99 
                 GL++g+ lga  + GFPs++tl++taeL+ hg+nvF++eS+n+S++v+++d+ + l++e+la++++g+r+fv++P+LrEa v + +de++ y+     +
  EPX71292.1 706 GLCPGVYLGAFGMVGFPSFHTLKHTAELSLHGINVFGNESKNPSVIVHVQDQRQMLTNEQLASQYIGRRIFVDWPYLREALVESATDENVVYQ-----K 799
                 9********************************************************************************************.....4 PP

                 SSEEEEEE--THHHHHHHHHHHHHHHHHHHHHH-EEES--S-EEEEEEEEEEEE-TTS-EEEEE-SS-EE...EEGGG-BS--SS--GGGS-B CS
     XRN1_D1 100 kkkkvvsrphsekekkefkkkaerierkyskrlgviigevevlvhveplkGLkrteeGalvKeyeeeeeleteyalqlvveevaneDeRfiek 192
                  ++++++r+++e ekk+f++k ++ +r+y+kr+gv+ g+++ +++v+p+kGL+ t+eGalvK ++  e++ ++y++qlvv+++a +D+Rfiek
  EPX71292.1 800 INGELKQRELNEYEKKSFERKVSSKNREYNKRFGVLFGDMRLMLQVRPIKGLQYTQEGALVKAFN--ENVLDDYPIQLVVDKIAIDDPRFIEK 890
                 57899************************************************************..66778********************8 PP

>> XRN1_D2_D3  Exoribonuclease Xrn1 D2/D3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.3   0.0   8.4e-33   2.5e-29       1      87 []     894     979 ..     894     979 .. 0.99

  Alignments for each domain:
  == domain 1  score: 101.3 bits;  conditional E-value: 8.4e-33
                 -HHHHS-TT-EEEE-SCTCTTEEEEEEEESSSEEEEEEEBS-SS---SHHHHHHHHHHHHS-EE------EEHHHHHHHHHHHCHXX CS
  XRN1_D2_D3   1 pieeEFPegskvffLGeyaYGrpaevtghsekklsvvlaklksekepefgkkrikeaeksnrYlpsfavakklglsplvLskitSsF 87 
                 p++ E+P+g+k+f+LGey+YGrpa+v+g+++++l ++l++ +   + ++g++ +++++ ++rY+ps+ vak+l+l+pl+LskitSs+
  EPX71292.1 894 PLDVEYPSGTKAFHLGEYNYGRPAQVIGCKNNRLAIWLSTAPG-LDATWGRSLVEDSKFKQRYYPSYVVAKMLNLHPLLLSKITSSY 979
                 8999***************************************.******************************************9 PP

>> SH3_12  Xrn1 SH3-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.9   0.1   1.8e-26   5.3e-23       1      68 []    1132    1198 ..    1132    1198 .. 0.96

  Alignments for each domain:
  == domain 1  score: 80.9 bits;  conditional E-value: 1.8e-26
      SH3_12    1 qqfrLgdrVvyvrdngksVPlGlrGtVVgrsdtlleVlfDeeflsgtdlggrcskmrgifvpptdlln 68  
                  q+f LgdrVvyv+d+gk VP+ + GtVV+  ++ l+V+fD +f+sgt+l+g+cs++rg+ v+p+ +ln
  EPX71292.1 1132 QTFSLGDRVVYVQDSGK-VPIAAYGTVVSIASHQLDVVFDLPFMSGTTLDGKCSPYRGMQVEPSMILN 1198
                  689*************7.***********77899******************************9998 PP

>> Xrn1_D3  Exoribonuclease 1 Domain-3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   5.5e-07    0.0016       5      68 ..    1061    1123 ..    1058    1125 .. 0.85

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 5.5e-07
     Xrn1_D3    5 lkeiaewLKkvk.adlvkVslESdSltkfSiaaiEdyvenYivqevklesKdlagVPrdAvldps 68  
                  l  ++ w+K+    +l +V+l+ d l + Si+ iE+     +v  + +  +++ gVPr A+l p 
  EPX71292.1 1061 LTAVKAWMKEKEiNSLYRVALDEDALDTESIQMIEEKAS--SVDSTYQVPRKVFGVPRYALLKPC 1123
                  67899****98736799******************9875..56666777899**********985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1337 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       822  (0.0458475); expected 358.6 (0.02)
Passed bias filter:                      549  (0.0306208); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.91u 0.29s 00:00:01.20 Elapsed: 00:00:00.49
# Mc/sec: 8129.86
//
Query:       EPX71293.1  [L=235]
Description: GTP cyclohydrolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.6e-76  255.0   0.2    3.2e-76  254.8   0.2    1.1  1  GTP_cyclohydroI  GTP cyclohydrolase I
    0.00086   19.4   0.0     0.0017   18.5   0.0    1.5  1  QueF             QueF-like protein
  ------ inclusion threshold ------
      0.026   14.8   0.7      0.091   13.1   0.1    1.9  2  OmpH             Outer membrane protein (OmpH-like)


Domain annotation for each model (and alignments):
>> GTP_cyclohydroI  GTP cyclohydrolase I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  254.8   0.2   5.3e-80   3.2e-76       1     178 [.      55     232 ..      55     233 .. 0.98

  Alignments for each domain:
  == domain 1  score: 254.8 bits;  conditional E-value: 5.3e-80
                      HHHHHHHHHHHTT--TTSTTTTTHHHHHHHHHHHHTGGGGS-G.GGGGSSEEETT--S-EEEEEEEEEEEETTT--EEEEEEEEEEE-TTEEE- CS
  GTP_cyclohydroI   1 ieeavreiLealgedpereglketpkRvakayeelfkgleedpkekvlkkvfeeekdemvlvkdiefsSlCeHHllpfigkahvaYiPkkkviG 94 
                      i+eavr+iL+ +gedp+r+gl  tp+R+aka+  ++kg+e + +e + ++vfee+++emv+v+di+++SlCeHHl+pf+gk+h++YiP+++v+G
       EPX71293.1  55 ISEAVRTILSCIGEDPQRQGLYGTPERYAKAMLYFTKGYEVNLREVINNAVFEEDHEEMVIVRDIDVFSLCEHHLVPFTGKIHIGYIPRRRVLG 148
                      679****************************************88889********************************************** PP

                      HHHHHHHHHHHHSSEE-HHHHHHHHHHHHHHHH--SEEEEEEEEEEHHHHSSTT--TT-EEEEEEEEEHHHH-HHHHHHHHHHH CS
  GTP_cyclohydroI  95 lSklaRivdvvarrlqvQErlteqiadaleevlkpkgvavvieaehlCmtmrgvkkkesktvtsalrGefkedaalreefleli 178
                      lSklaRi+d+++rrlqvQErlt+q+a+a+++vlkp+gvavv+ea+h+Cm mrgv+k++s+tvts+l+G f++ +++reef++li
       EPX71293.1 149 LSKLARIADMFSRRLQVQERLTKQVAQAVQAVLKPQGVAVVMEASHMCMVMRGVEKPGSSTVTSSLTGIFQRSSKTREEFFRLI 232
                      *********************************************************************************997 PP

>> QueF  QueF-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   2.8e-07    0.0017       4      59 ..     134     189 ..     131     194 .. 0.95

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 2.8e-07
        QueF   4 atlvirYvpdkkvvelkslklYlisfrnrgifhEevvnrilddlvealkPkwlevv 59 
                 ++++i Y+p+++v+ l  l +    f +r + +E  ++++++ + ++lkP+ + vv
  EPX71293.1 134 GKIHIGYIPRRRVLGLSKLARIADMFSRRLQVQERLTKQVAQAVQAVLKPQGVAVV 189
                 799************************************************99886 PP

>> OmpH  Outer membrane protein (OmpH-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.26   1.6e+03      80     103 ..      41      64 ..      37      75 .. 0.65
   2 ?   13.1   0.1   1.5e-05     0.091      81     118 ..     156     193 ..     148     204 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.26
                 HHHHHHHHHHHHHHHHHHHHHHHH CS
        OmpH  80 aqelqkkqqellkpildkinkaik 103
                 ++ ++ ++ + +++i + ++++++
  EPX71293.1  41 QERIETEEDQKVEKISEAVRTILS 64 
                 455666666666666666666665 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 1.5e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SEEEE.G CS
        OmpH  81 qelqkkqqellkpildkinkaikevakekgydlvldsr 118
                  ++ +++ ++++++++++ +a+++v k +g+++v++++
  EPX71293.1 156 ADMFSRRLQVQERLTKQVAQAVQAVLKPQGVAVVMEAS 193
                 789999999**************************933 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (235 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       790  (0.0440627); expected 358.6 (0.02)
Passed bias filter:                      645  (0.0359752); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 1713.72
//
Query:       EPX71294.1  [L=714]
Description: UBA/TPR/DNAJ domain-containing protein Ucp7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-05   24.2   0.0        1.1    9.5   0.0    4.2  4  TPR_2     Tetratricopeptide repeat
    2.3e-05   24.0   0.0        1.9    8.4   0.0    4.4  4  TPR_1     Tetratricopeptide repeat
    8.1e-05   22.5   0.5        3.1    8.3   0.0    4.8  5  TPR_8     Tetratricopeptide repeat
    0.00017   21.4   0.0    0.00043   20.1   0.0    1.7  1  UBA       UBA/TS-N domain
    0.00063   20.0   0.0       0.24   11.7   0.0    3.7  3  TPR_12    Tetratricopeptide repeat
     0.0007   19.7   0.0     0.0026   17.8   0.0    2.0  1  DnaJ      DnaJ domain
     0.0087   16.2   1.8       0.28   11.4   0.1    3.0  2  Death     Death domain
  ------ inclusion threshold ------
      0.026   14.5   0.0         44    4.4   0.0    3.9  4  TPR_7     Tetratricopeptide repeat
      0.092   12.7   2.6        8.1    6.5   0.1    4.0  4  L27_1     L27_1


Domain annotation for each model (and alignments):
>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.85   1.7e+03      10      24 ..     211     225 ..     210     227 .. 0.84
   2 !    9.5   0.0   0.00055       1.1       7      32 ..     436     461 ..     434     462 .. 0.90
   3 ?    4.0   0.0     0.032        64       4      29 ..     471     496 ..     469     498 .. 0.88
   4 ?    4.7   0.0     0.019        38       4      27 ..     521     544 ..     518     547 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.85
       TPR_2  10 ayyklgdyeeAleaf 24 
                 a+ + g ++eA+++ 
  EPX71294.1 211 ALQQTGSLQEAIDYI 225
                 6789999*****996 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00055
       TPR_2   7 lGlayyklgdyeeAleafekAleldP 32 
                  G+ ++++gd+++A++ f+k l++ P
  EPX71294.1 436 EGNDCFHKGDFNQAINIFRKTLSHIP 461
                 6999****************998877 PP

  == domain 3  score: 4.0 bits;  conditional E-value: 0.032
       TPR_2   4 lynlGlayyklgdyeeAleafekAle 29 
                 l+n+ l+y+k gd    l++ +kAl 
  EPX71294.1 471 LCNRSLCYMKIGDIRSSLQDSQKALD 496
                 899**********9999999888886 PP

  == domain 4  score: 4.7 bits;  conditional E-value: 0.019
       TPR_2   4 lynlGlayyklgdyeeAleafekA 27 
                   + +++ ++l +y+ Ale +   
  EPX71294.1 521 MIRKAQVFEQLEKYQSALEVWSDL 544
                 67899*************998655 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.74   1.5e+03      10      23 ..     211     224 ..     210     226 .. 0.87
   2 !    8.4   0.0   0.00095       1.9       8      32 ..     437     461 ..     436     462 .. 0.91
   3 ?    4.1   0.0     0.022        44       4      30 ..     471     497 ..     468     498 .. 0.87
   4 !    5.4   0.0    0.0085        17       4      22 ..     521     539 ..     518     542 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.74
                 HHHHTT-HHHHHHH CS
       TPR_1  10 ayfklgkydeAley 23 
                 a+++ g ++eA++y
  EPX71294.1 211 ALQQTGSLQEAIDY 224
                 6788999*****98 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.00095
                 HHHHHHTT-HHHHHHHHHHHHHHST CS
       TPR_1   8 GnayfklgkydeAleyyekALelnP 32 
                 Gn +f++g++++A+  ++k L++ P
  EPX71294.1 437 GNDCFHKGDFNQAINIFRKTLSHIP 461
                 8999***************998877 PP

  == domain 3  score: 4.1 bits;  conditional E-value: 0.022
                 HHHHHHHHHHTT-HHHHHHHHHHHHHH CS
       TPR_1   4 lynlGnayfklgkydeAleyyekALel 30 
                 l+n+ ++y+k g+    l++ +kAL +
  EPX71294.1 471 LCNRSLCYMKIGDIRSSLQDSQKALDI 497
                 778889**********99999999976 PP

  == domain 4  score: 5.4 bits;  conditional E-value: 0.0085
                 HHHHHHHHHHTT-HHHHHH CS
       TPR_1   4 lynlGnayfklgkydeAle 22 
                   ++++++ +l+ky+ Ale
  EPX71294.1 521 MIRKAQVFEQLEKYQSALE 539
                 5799*************98 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0      0.23   4.5e+02       9      25 ..     210     226 ..     207     228 .. 0.87
   2 ?    3.4   0.0     0.054   1.1e+02      13      26 ..     442     455 ..     440     458 .. 0.87
   3 !    8.3   0.0    0.0015       3.1       2      30 ..     469     497 ..     468     500 .. 0.91
   4 ?    2.9   0.0      0.08   1.6e+02       2      22 ..     519     539 ..     518     540 .. 0.88
   5 ?   -3.0   0.1       6.5   1.3e+04      21      29 ..     667     675 ..     667     675 .. 0.81

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.23
                 HHHHHTT-HHHHHHHHH CS
       TPR_8   9 siylklgdyeeAkeyye 25 
                 s+++++g ++eA+ y+ 
  EPX71294.1 210 SALQQTGSLQEAIDYIL 226
                 5789**********986 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.054
                 HTT-HHHHHHHHHH CS
       TPR_8  13 klgdyeeAkeyyek 26 
                  +gd+++A+  ++k
  EPX71294.1 442 HKGDFNQAINIFRK 455
                 69**********99 PP

  == domain 3  score: 8.3 bits;  conditional E-value: 0.0015
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekalel 30 
                 ++++n +++y+k gd+ ++ +  +kal++
  EPX71294.1 469 PLLCNRSLCYMKIGDIRSSLQDSQKALDI 497
                 6799**********************987 PP

  == domain 4  score: 2.9 bits;  conditional E-value: 0.08
                 CHHHHHHHHHHHTT-HHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAke 22 
                 +++ +++++ ++l++y++A e
  EPX71294.1 519 KSMIRKAQVFEQLEKYQSALE 539
                 67889*************977 PP

  == domain 5  score: -3.0 bits;  conditional E-value: 6.5
                 HHHHHHHHH CS
       TPR_8  21 keyyekale 29 
                 k +y+ka++
  EPX71294.1 667 KIAYMKAIS 675
                 5689**996 PP

>> UBA  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   2.2e-07   0.00043       6      37 .]     195     225 ..     193     225 .. 0.95

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 2.2e-07
                 HHHHHHTTS-HHHHHHHHHHTTTSHHHHHHHH CS
         UBA   6 iqrLveMGFdreevveALratgnNeErAveyL 37 
                 +++L +MGF++   + AL +tg +++ A++y+
  EPX71294.1 195 YAQLRAMGFPDTLSRSALQQTG-SLQEAIDYI 225
                 68********************.********8 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0       0.8   1.6e+03      12      25 ..     211     224 ..     206     227 .. 0.61
   2 !   11.7   0.0   0.00012      0.24      10      74 ..     437     497 ..     435     500 .. 0.93
   3 ?    2.9   0.0      0.07   1.4e+02      44      66 ..     517     539 ..     510     545 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.8
      TPR_12  12 vlrrlgrydeAlel 25 
                 +l++ g ++eA+++
  EPX71294.1 211 ALQQTGSLQEAIDY 224
                 45555555555555 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 0.00012
      TPR_12  10 aavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealai 74 
                 ++ +++ g++ +A+ +++k l  +   +++ h   +  l+n + +y + g+ +  l+  ++al+i
  EPX71294.1 437 GNDCFHKGDFNQAINIFRKTLSHI---PEG-HTRSIPLLCNRSLCYMKIGDIRSSLQDSQKALDI 497
                 67899*******************...655.889*****************************98 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.07
      TPR_12  44 tattlrnLgrlyralgryeeAle 66 
                 ++ +++  ++++++l++y+ Ale
  EPX71294.1 517 YVKSMIRKAQVFEQLEKYQSALE 539
                 56788888999999999999987 PP

>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   1.3e-06    0.0026      15      56 ..     664     711 ..     656     713 .. 0.79

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 1.3e-06
                 HHHHHHHHHHHHHHSTTTSCCHHHHHH......HHHHHHHHHHHHTSH CS
        DnaJ  15 deIkkaYrklalkyHPDknpkdpeaee......kFkeineAyevLsdp 56 
                 + +k aY k +  +HPDk p++ + e+      +F ++neA+++ +++
  EPX71294.1 664 KRVKIAYMKAISCVHPDKLPQQATVEQrliaesAFSNLNEAWDIFKQQ 711
                 6799*************9977664444444444**********99876 PP

>> Death  Death domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.2     0.073   1.5e+02      29      77 ..     219     266 ..     209     271 .. 0.87
   2 !   11.4   0.1   0.00014      0.28      33      69 ..     607     641 ..     599     645 .. 0.85

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.073
                 HHHHHHHHHSS.STHHHHHHHHHHHHHHHHTTTCSHHHHHHHHHHTTHHH CS
       Death  29 eeeidrieken.nslrsqsyalLqlWedregenatvgtLleaLrklgrdd 77 
                 +e id+i +++ +s++ q+ +   + e++    +++++L +++++++ ++
  EPX71294.1 219 QEAIDYILEQEpRSPQNQTSNSVSNNEQY--YSDKLSELQQVSNQIKDQF 266
                 566999999999****************9..999*******999998766 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00014
                 HHHHHSSSTHHHHHHHHHHHHHHHHTTTCSHHHHHHH CS
       Death  33 driekennslrsqsyalLqlWedregenatvgtLlea 69 
                 + i +e n+lr+++++l + W++  g+++++  Ll+ 
  EPX71294.1 607 EKIDEEKNQLREPVQQLINRWKS--GKEGNIRALLSS 641
                 67888889*************98..699999999875 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       3.4   6.9e+03       8      24 ..     211     227 ..     210     235 .. 0.77
   2 ?    4.4   0.0     0.022        44       9      30 ..     440     459 ..     437     465 .. 0.79
   3 ?    4.3   0.0     0.025        49       2      23 ..     478     499 ..     477     506 .. 0.86
   4 ?   -0.2   0.0      0.64   1.3e+03       6      20 ..     525     539 ..     521     540 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 3.4
       TPR_7   8 lysrlGdyeeAielyeq 24 
                 + ++ G  +eAi++  +
  EPX71294.1 211 ALQQTGSLQEAIDYILE 227
                 5677788899*999765 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.022
       TPR_7   9 ysrlGdyeeAielyeqsLaltk 30 
                 ++  Gd+ +Ai ++++   l  
  EPX71294.1 440 CFHKGDFNQAINIFRK--TLSH 459
                 6778***********9..6655 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.025
       TPR_7   2 LlnLarlysrlGdyeeAielye 23 
                 +  +++++s+l+d ++A+++  
  EPX71294.1 478 YMKIGDIRSSLQDSQKALDIIG 499
                 5669*************98765 PP

  == domain 4  score: -0.2 bits;  conditional E-value: 0.64
       TPR_7   6 arlysrlGdyeeAie 20 
                 a+++++l +y+ A+e
  EPX71294.1 525 AQVFEQLEKYQSALE 539
                 8999********998 PP

>> L27_1  L27_1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0     0.089   1.8e+02      39      51 ..     361     373 ..     357     375 .. 0.88
   2 ?   -4.0   0.0       7.6   1.5e+04       5      15 ..     489     499 ..     488     500 .. 0.82
   3 ?    0.3   0.0      0.34   6.9e+02      10      23 ..     527     540 ..     523     553 .. 0.81
   4 ?    6.5   0.1    0.0041       8.1      14      42 ..     596     629 ..     585     630 .. 0.88

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.089
       L27_1  39 iFksqLfqALLDI 51 
                  F  +Lf++L++I
  EPX71294.1 361 EFNDNLFSSLIEI 373
                 5999********9 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 7.6
       L27_1   5 kDaerALelLe 15 
                 +D ++AL+++ 
  EPX71294.1 489 QDSQKALDIIG 499
                 79999*99875 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 0.34
       L27_1  10 ALelLeeyrakLsk 23 
                   e+Le+y++ L+ 
  EPX71294.1 527 VFEQLEKYQSALEV 540
                 579*******9986 PP

  == domain 4  score: 6.5 bits;  conditional E-value: 0.0041
       L27_1  14 LeeyrakLsk.....eedeeLrqalerviniFks 42 
                 L+eyr k ++     ee ++Lr+ ++++in  ks
  EPX71294.1 596 LTEYRDKQKQaekidEEKNQLREPVQQLINRWKS 629
                 788888877788888999*************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (714 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1253  (0.0698868); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.65u 0.31s 00:00:00.96 Elapsed: 00:00:00.47
# Mc/sec: 4583.18
//
Query:       EPX71295.1  [L=356]
Description: endonuclease Rec12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-23   82.7   0.1    2.8e-23   81.7   0.1    1.5  1  TP6A_N    Type IIB DNA topoisomerase
    0.00085   19.3   0.0     0.0023   17.8   0.0    1.7  2  DUF2399   Protein of unknown function C-terminus (DUF2399)


Domain annotation for each model (and alignments):
>> TP6A_N  Type IIB DNA topoisomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.7   0.1   3.1e-27   2.8e-23       2      62 .]      76     136 ..      75     136 .. 0.99

  Alignments for each domain:
  == domain 1  score: 81.7 bits;  conditional E-value: 3.1e-27
                 HHHHHHHHHHHHHHHHHTT--EEHHHHHHHGGGS-SSHHHHHHHHHHHHHHHTS-GGGGTE CS
      TP6A_N   2 kfaqllkvlelihelleegkvvTkRdiYYrdvelFksQaesdrliddievllgvsReeLnv 62 
                 k+aq+l vl++ihe++e+  v+TkRdi+Y+dv+lFk+Q ++d+li+d+++++g++R++Lnv
  EPX71295.1  76 KIAQILQVLDCIHEAIETESVITKRDIFYHDVQLFKKQFVVDELIEDLACTIGCPRSALNV 136
                 89**********************************************************8 PP

>> DUF2399  Protein of unknown function C-terminus (DUF2399)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0      0.92   8.3e+03      43      55 ..     121     133 ..     114     134 .. 0.68
   2 !   17.8   0.0   2.6e-07    0.0023      18      79 ..     177     237 ..     163     248 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 0.92
     DUF2399  43 aplvctsGqpsaa 55 
                 + l ct G p++a
  EPX71295.1 121 EDLACTIGCPRSA 133
                 4577888888876 PP

  == domain 2  score: 17.8 bits;  conditional E-value: 2.6e-07
     DUF2399  18 egravyVvENpavlaaaadrlgakaaplvctsGqpsaaalelldklaaagarlrYhGDfDwp 79 
                 ++r v VvE  av++++++r g ++  lv  +G+p +++ ++l ++++   +l   G fDw+
  EPX71295.1 177 TARWVLVVEKEAVFQTLVER-GLEDTILVTAKGFPDLSTRKFLLEITKYLPQLPIFGIFDWD 237
                 4555****************.*************************9999999999988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       419  (0.02337); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.29s 00:00:00.78 Elapsed: 00:00:00.45
# Mc/sec: 2387.81
//
Query:       EPX71296.1  [L=209]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.019   15.3   8.6      0.054   13.9   0.3    2.4  2  DnaJ_CXXCXGXG    DnaJ central domain
       0.45   10.5   6.2        9.4    6.2   0.0    3.5  3  Zn_ribbon_SprT   SprT-like zinc ribbon domain


Domain annotation for each model (and alignments):
>> DnaJ_CXXCXGXG  DnaJ central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   3.0    0.0058        52      44      64 ..     126     145 ..     123     147 .. 0.73
   2 ?   13.9   0.3     6e-06     0.054      17      52 ..     181     207 ..     172     209 .] 0.56

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.0058
  DnaJ_CXXCXGXG  44 CpeCeGtGkvikekdkCkkCk 64 
                    C++C+ tG  +   ++C +C 
     EPX71296.1 126 CRKCNNTGYKF-GGRPCGRCA 145
                    88888888887.445788885 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 6e-06
  DnaJ_CXXCXGXG  17 CktCkGsGvvreeqktlgpfvqqsqstCpeCeGtGk 52 
                    C +CkG G++         ++  +++ Cp C+G Gk
     EPX71296.1 181 CGNCKGVGQI-------DYLI--FTEICPVCNGIGK 207
                    6666666632.......1111..2345666666665 PP

>> Zn_ribbon_SprT  SprT-like zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0     0.001       9.4      24      33 ..     111     132 ..      99     137 .. 0.72
   2 ?    5.3   0.3     0.002        18       7      33 ..     141     187 ..     141     191 .. 0.79
   3 ?   -1.3   0.2      0.24   2.1e+03      27      31 ..     199     203 ..     198     206 .. 0.58

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.001
  Zn_ribbon_SprT  24 n............YrCrrCkgt 33 
                     n            Y Cr+C +t
      EPX71296.1 111 NnsvnspypyppgYFCRKCNNT 132
                     3455566666777******976 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.002
  Zn_ribbon_SprT   7 CtgCgreythhlsirrhn....................YrCrrCkgt 33 
                     C++C r+++h + +++ +                      C+ Ckg+
      EPX71296.1 141 CGRCARRFGHSFDVQPISfgrpppnalvvqpgdpripgRLCGNCKGV 187
                     99999999999998888888888888888888888888888888876 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 0.24
  Zn_ribbon_SprT  27 CrrCk 31 
                     C+ C 
      EPX71296.1 199 CPVCN 203
                     55554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       940  (0.052429); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 1383.30
//
Query:       EPX71297.1  [L=327]
Description: protein phosphatase regulatory subunit Glc9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-10   42.0  17.9    5.4e-08   33.7  13.3    3.0  2  IPP-2     Protein phosphatase inhibitor 2 (IPP-2)


Domain annotation for each model (and alignments):
>> IPP-2  Protein phosphatase inhibitor 2 (IPP-2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1      0.47   8.4e+03      52      60 ..      21      30 ..       7      52 .. 0.50
   2 !   33.7  13.3     3e-12   5.4e-08       2     125 ..      57     300 ..      56     309 .. 0.56

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.47
       IPP-2 52 a.eldaesla 60
                + e+d+esl+
  EPX71297.1 21 HdETDNESLK 30
                1133333333 PP

  == domain 2  score: 33.7 bits;  conditional E-value: 3e-12
       IPP-2   2 kWDEmnilatnhpadkdygtmkIdEPkTPYhrmv..dedd...........dede.............................asdeeekeaeldaes 58 
                 +WDE+n l  ++   ++++tmkI EPkTP++++   d  d              e                             +              
  EPX71297.1  57 RWDEEN-LRLAEA--QKTSTMKISEPKTPFQHTLllD--DevpdlsldnseT--EladdplstqlqvppisqeqknddtkkdavK-------------- 134
                 8*****.566663..3469***********9998542..3356777766440..2444445555555443332223333344440.............. PP

       IPP-2  59 lae.........................................................................kleaaaessekkssseeee.... 80 
                   +                                                                         +                      
  EPX71297.1 135 --TpdpfpvprdgpvlspkktsfssdypqastsdadraadvtrksttrnarfyspqssenspylekqmndsnpkvvA-----------------Vrtrq 214
                 ..245555555555555555555555555555555555555555555567777777766666555555544443221.................02222 PP

       IPP-2  81 ........................................eaeseeeeeedlseeeeeekrreFeekRKaHYnefka.vk.llkeel 125
                                                         +++ +e + +  s  ++ +++++F+e R++HY  +++ +k + +e++
  EPX71297.1 215 nspmkdskartpgregigfgippatettsvlpeaiimgeeNESMDEGDPSAHSF-NQGQQKSKFDELRRKHYFAMANpLKkENNESK 300
                 334444445667778899999999999999999999986422223333333343.667799***********655551444222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       750  (0.0418317); expected 358.6 (0.02)
Passed bias filter:                      302  (0.0168442); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 2270.71
//
Query:       EPX71298.1  [L=211]
Description: COPII-coated vesicle component Erp2/3/4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.1e-41  140.4   0.4    7.1e-41  140.1   0.4    1.0  1  EMP24_GP25L  emp24/gp25L/p24 family/GOLD


Domain annotation for each model (and alignments):
>> EMP24_GP25L  emp24/gp25L/p24 family/GOLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.1   0.4     4e-45   7.1e-41       2     182 .]      23     204 ..      22     204 .. 0.90

  Alignments for each domain:
  == domain 1  score: 140.1 bits;  conditional E-value: 4e-45
  EMP24_GP25L   2 ltfklpageekCfyeelkk.gtlltgsyqvtdggaaldvdlsvkdpdgngerlvkkkdresegdfsftakesgeykvCfdnsfstksskkvsfdievg 98 
                  ltf+l+++e++Cf+ e +  g++ +++y v++gg ++dvd+s++ p++  + +   k+r++  d+ ft +e+gey +Cfdn++s +++k +++++ ++
   EPX71298.1  23 LTFQLENQERQCFHIEAPFkGEKCHFTYAVQSGG-SFDVDYSITAPSK--KSVALGKKRRQA-DIFFTLEEKGEYDICFDNHMSAFTDKILTMELVME 116
                  8****************877**************.9********5555..989998777665.9*********************************8 PP

  EMP24_GP25L  99 seasd...ykdsak.kekletleselkkleekldsikreqkylrereerlrdtnestnsrvvwwsilqllvlvlvavlqvyyLkrfFk 182
                  +e s      ds +     ++++ ++ ++++ l++i r q+y r+re+r+  t+ st+sr++w+si++ +++v+++ lqv+++k+fFk
   EPX71298.1 117 NEMSLpslNRDSPPkGYNPNSMQGTVMEISTALSEIDRIQTYFRTRESRNFSTVRSTESRILWFSIAEAIMVVGLSSLQVFIVKTFFK 204
                  776657764455551444456******************************************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       619  (0.0345251); expected 358.6 (0.02)
Passed bias filter:                      521  (0.0290591); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 1609.95
//
Query:       EPX71299.1  [L=657]
Description: SUMO deconjugating cysteine peptidase Ulp2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.1e-49  168.3   2.7    3.2e-49  167.7   2.7    1.3  1  Peptidase_C48  Ulp1 protease family, C-terminal catalytic dom


Domain annotation for each model (and alignments):
>> Peptidase_C48  Ulp1 protease family, C-terminal catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  167.7   2.7   1.8e-53   3.2e-49       1     214 [.     384     616 ..     384     618 .. 0.95

  Alignments for each domain:
  == domain 1  score: 167.7 bits;  conditional E-value: 1.8e-53
                    ---BHHHHHHHHHHHHHHHHH.CCCTCCCEEE--THHHHHHC..........SS.......TCHCHHHCTTCCCCCS..-GGG-SEEEEEEEC.TT CS
  Peptidase_C48   1 ewlndtvidfylkllaerles.seskaervhflntffvskLtkavkdfkknkskkkfkeskkkdlyngvrrwtrkvnkedlfdkdiiyiPinedgk 95 
                    e+lndt++dfyl++l+++le+ ++s a+++h++n+ff+s+L           sk+k+ ++ +    +gvr+wt+k+   dlf k+++++Pine  +
     EPX71299.1 384 EFLNDTIVDFYLRYLYCKLEKeNPSLAQSTHIFNSFFFSRLI----------SKDKDGKRLG---QSGVRKWTQKF---DLFTKKFVIVPINE-MF 462
                    68****************************************..........7777777776...78*********...**************.** PP

                    EEEEEEEETCCC.....................................EEEEE-TTS-SSH.HHHHHHHHHHHHHHHHHCCCCCSTT-.GGGEEE CS
  Peptidase_C48  96 HWvlliinlpdk.....................................tililDSlislhtvkkenrpinnlkpyLleealkkkqkqldltpfei 154
                    HW+l+ii++ d+                                      ili+DSl++ h+       +++l+ yL++ea ++k+ ql+ t+++ 
     EPX71299.1 463 HWYLAIICNIDQlvptnhknsseeddeitvpstqndksenkvvltsnspVILIFDSLANMHK-----GSLKYLRDYLIDEAWERKKIQLKPTDIRG 553
                    **************************************************************.....***************************** PP

                    EEEE-----SSCCCHHHHHHHHHHHHHCTHHCHHHHH....SS.HHHHHHHHHHHTTHHHHCTC CS
  Peptidase_C48 155 erltkvpqqknsgDCGiyvlkfiellaegapqessvt....ltekdvdsfrkklaldiyeelrs 214
                    +++ kvpqq+n++DCGi++l+f+el++e + q  s+      +++  +sf+ ++++ + ++ r+
     EPX71299.1 554 FHA-KVPQQSNFSDCGIFALHFVELFLEAPQQVLSDIldksARQNVSQSFDERWNVHKINTRRE 616
                    ***.***************************99877666666699999*******999888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (657 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       988  (0.0551063); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 4465.87
//
Query:       EPX71300.1  [L=801]
Description: transcription factor TFIIH complex ERCC-3 subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   1.2e-123  411.2   0.2   2.6e-123  410.0   0.2    1.5  1  ERCC3_RAD25_C  ERCC3/RAD25/XPB C-terminal helicase
    2.2e-37  128.0   0.0    5.4e-37  126.8   0.0    1.7  1  Helicase_C_3   Helicase conserved C-terminal domain
    2.8e-16   60.0   0.1    9.6e-16   58.2   0.0    1.9  2  ResIII         Type III restriction enzyme, res subunit
    2.6e-11   43.9   0.1    7.1e-11   42.4   0.1    1.8  1  Helicase_C     Helicase conserved C-terminal domain
    7.7e-09   34.7   0.0    2.3e-08   33.2   0.0    1.6  1  SNF2_N         SNF2 family N-terminal domain
    0.00024   20.9   0.0    0.00041   20.2   0.0    1.4  1  DEAD           DEAD/DEAH box helicase
  ------ inclusion threshold ------
      0.035   14.7  10.5       0.21   12.2   0.4    3.4  3  SIN1           Stress-activated map kinase interacting protei
      0.075   11.9   0.0       0.13   11.1   0.0    1.3  1  AAA_34         P-loop containing NTP hydrolase pore-1
       0.23   11.8   4.7       0.26   11.6   0.0    2.5  2  FlgD           Flagellar hook capping protein - N-terminal re


Domain annotation for each model (and alignments):
>> ERCC3_RAD25_C  ERCC3/RAD25/XPB C-terminal helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  410.0   0.2  1.3e-126  2.6e-123       1     235 [.     502     735 ..     502     749 .. 0.97

  Alignments for each domain:
  == domain 1  score: 410.0 bits;  conditional E-value: 1.3e-126
  ERCC3_RAD25_C   1 LqekgylakvqcaevWcpmtaefykeylkakskkkkllyvmnpnkfracefLikyhekrgDkiivfsDnvfaLkeyakklkkpyiyGetseaerlk 96 
                    L++kg++a+vqcaevWcpmt+efy+eyl+++s+k++lly+mnp+kf+ac+fLi+yhekrgDkiivfsDnv+aL++ya kl k +iyG t++ er++
     EPX71300.1 502 LAQKGHIANVQCAEVWCPMTTEFYNEYLRENSRKRMLLYIMNPKKFQACQFLIDYHEKRGDKIIVFSDNVYALRAYALKLGKYFIYGGTPQLERMR 597
                    789********************************************************************************************* PP

  ERCC3_RAD25_C  97 ilqkfkknpkvntiflskvgDtsiDlPeanvliqisshfgsrrqeaqrlGriLrakkksneeefnaffYsLvskDtkemaystkrqqflvdqGYaf 192
                    il++f+ n+ vntiflskvgDtsiDlPea++liqissh+gsrrqeaqrlGriLrak++ n+++fnaffYsLvskDt+em+ys+krq+fl+dqGYaf
     EPX71300.1 598 ILENFQYNELVNTIFLSKVGDTSIDLPEATCLIQISSHYGSRRQEAQRLGRILRAKRR-NDAGFNAFFYSLVSKDTQEMFYSSKRQAFLIDQGYAF 692
                    **********************************************************.9************************************ PP

  ERCC3_RAD25_C 193 kviteleeleeeeelaystkeeqkellqkvlaakdeeaeeeel 235
                    kvit+l+++e+ ++lay++k+e+ ellq+vl +++e+a+ ++ 
     EPX71300.1 693 KVITNLKGMENLPNLAYASKAERLELLQEVLLQNEEAANLDDG 735
                    **********************************998876654 PP

>> Helicase_C_3  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.8   0.0   2.7e-40   5.4e-37       1     124 [.      89     214 ..      89     217 .. 0.97

  Alignments for each domain:
  == domain 1  score: 126.8 bits;  conditional E-value: 2.7e-40
  Helicase_C_3   1 livqa.DltillegdsplaeearaaLaafAelesrpehahtyrltplSlrrAldaGltaeeiiefLerlskypvPqaleylirdvarryGklrlgl. 95 
                   l++++ D++++le++splae+a ++L +++e++srp  +h+yr+t +Sl++A+++Gl++e+ii++L+rlsk+p+Pq+++++ir ++ +yGk++l+l 
    EPX71300.1  89 LWINPvDGRVILEAFSPLAEQAIDFLVTISEPVSRPAYIHEYRITTYSLYAAVSVGLKTEDIISVLDRLSKTPIPQSIVEFIRACTVSYGKVKLVLk 185
                   678877****************************************************************99************************* PP

  Helicase_C_3  96 easlvlrsddpalleelladkkiaklllr 124
                   +++++++s d+++l+ ll+d+ i +l++ 
    EPX71300.1 186 KNRYFIESGDANVLRLLLQDPIIGPLRVD 214
                   ***********************999875 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.1       1.7   3.4e+03      85     118 ..     231     266 ..     186     294 .. 0.60
   2 !   58.2   0.0   4.8e-19   9.6e-16       3     169 ..     320     476 ..     318     478 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 1.7
                 GEEEESSS-B--.........-SEEEEEHHHHHHTH CS
      ResIII  85 igkkvsgdkkka..kekdstnkkilvttiqsldads 118
                 +  +v+g+++++   e+ ++++++l++ +  l++++
  EPX71300.1 231 EASSVTGNQQNEtsGENGQDSSDFLFSAVVGLQEEE 266
                 333344444444443334444455555554444444 PP

  == domain 2  score: 58.2 bits;  conditional E-value: 4.8e-19
                 EE-HHHHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--..... CS
      ResIII   3 elreyQeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkeekflflvprkslleqtleefkkflseaykeigkkvsgdkkkakekds 101
                 ++r+yQe+ + ++  +    r + g+i++++G+GKTlv + ++  ++k      +++l+ +   + q++++f ++++ +++ +  +++ d+k++   + 
  EPX71300.1 320 QIRPYQEKSLSKMFGN---GRARSGIIVLPCGAGKTLVGITAACTIKK-----SVIVLCTSSVSVMQWRQQFLQWSNIKAD-HIAVFTADHKER---FH 406
                 7899***999999644...6899*****************99999999.....5**********************99875.777777777777...79 PP

                 ..-SEEEEEHHHHHHTH...........HHHTTT-SEEEEETGGGTTS.TTTHHHHHT---SEEEEEESS- CS
      ResIII 102 tnkkilvttiqsldadseee...eeeseellrdrfdviiiDEaHrlgakkswreilekfkeavllglTATp 169
                 +++ ++v+t++++ + +++    +++ + l   +  +i+ DE+H + a + +r+++  + +  +lglTAT+
  EPX71300.1 407 SEAGVVVSTYSMVANTRNRSydsQKMMDFLTGREWGFILLDEVHVVPA-AMFRRVVTTIAAHSKLGLTATL 476
                 9***************95556633333334444445************.*********************7 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.4   0.1   3.5e-14   7.1e-11       4     110 ..     548     652 ..     545     653 .. 0.85

  Alignments for each domain:
  == domain 1  score: 42.4 bits;  conditional E-value: 3.5e-14
                 HHHHHHH.HHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH.TTSSSEEEESGGGTSSSTSTTESEEEESSSS.SSHHH CS
  Helicase_C   4 eallell.kleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfn.kgesdvLiatdvaerGidipkvnlVinfdlp.rnvts 99 
                 +a+  l+  +e++g+ki++f+ ++  l    + l   ++    ++g +pq er +ile+f+ ++ ++ +  ++v+ ++id+p+++++i+++    + ++
  EPX71300.1 548 QACQFLIdYHEKRGDKIIVFSDNVYALR--AYAL---KLGKYFIYGGTPQLERMRILENFQyNELVNTIFLSKVGDTSIDLPEATCLIQISSHyGSRRQ 641
                 55555557789**************995..5553...3344467999**************888889**************************5559** PP

                 HHHHHTTSSST CS
  Helicase_C 100 yiqriGRtgRa 110
                   qr GR+ Ra
  EPX71300.1 642 EAQRLGRILRA 652
                 **********8 PP

>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.2   0.0   1.2e-11   2.3e-08      94     218 ..     361     479 ..     201     505 .. 0.77

  Alignments for each domain:
  == domain 1  score: 33.2 bits;  conditional E-value: 1.2e-11
                 ...S-EEEE--HHH.HHHHHHHHHHH-TTS-EEE--SSHHHH-----------------EEEE-HHHHHHHT..........TTS-S-S-SEEEES-GG CS
                 xxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  94 tlagptLivvPasl.ldqWeneierhvsssalrvlvyggqkkmkkkntkvapklladydvvittYdvlsreaelq....kkrsvlkqvewkrvvlDEgh 187
                 t+++ +++++ +s+ + qW +++ ++ + +a ++ v + ++         +++++ +++vv+ tY+++++  +++    k ++ l+ +ew ++ lDE h
  EPX71300.1 361 TIKKSVIVLCTSSVsVMQWRQQFLQWSNIKADHIAVFTADH---------KERFHSEAGVVVSTYSMVANTRNRSydsqKMMDFLTGREWGFILLDEVH 450
                 33345999999976478*********876655555555542.........346999*************9998889999******************** PP

                 GT--TTSHHHHHHHH---S-EEEE-S--SSS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 188 tlknstskaaeavskLstsnrwiltGTPiqn 218
                  +   ++  + +v +++++ ++ lt+T + +
  EPX71300.1 451 VVP--AAMFRRVVTTIAAHSKLGLTATLVRE 479
                 *96..67888899999999999999996654 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.0     2e-07   0.00041       2     170 ..     323     477 ..     322     483 .. 0.73

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 2e-07
                 HHHHHHHHHHHTT...CEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEET...TSSHHHHHHHH CS
                 xxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxx RF
        DEAD   2 diQaeaiplilgg...gdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliig...gvaardqlskl 94 
                 ++Q++++  + g+   ++ ++  + G+GKTl+ + +++        + ++ +++++ +   + q  +++ ++ + i+    ++++   +++ +++  ++
  EPX71300.1 323 PYQEKSLSKMFGNgraRSGIIVLPCGAGKTLVGITAAC--------TIKKSVIVLCTSSVSVMQWRQQFLQWSN-IKADHIAVFTadhKERFHSEAGVV 412
                 78999999999553446889************888888........4567899999999999******999999.443444444411133335555555 PP

                 HTTCSEEEEEHHHHHHHH.HCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBS CS
                 xxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  95 dngvdivvgtpgrlddll.stgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlp 170
                  +++ +v  t  r  d       l+ ++  f+ lDE++ +    f++ + +i+++              + l+ATl 
  EPX71300.1 413 VSTYSMVANTRNRSYDSQkMMDFLTGREWGFILLDEVHVVPAAMFRRVVTTIAAHS------------KLGLTATLV 477
                 56677777777777774322233558899*******************99999888............677888876 PP

>> SIN1  Stress-activated map kinase interacting protein 1 (SIN1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   2.2     0.045        89      46     101 ..       6      60 ..       2      61 .. 0.79
   2 ?   12.2   0.4    0.0001      0.21      21      97 ..     217     289 ..     190     294 .. 0.58
   3 ?    2.4   0.0       0.1   2.1e+02      72     112 ..     618     655 ..     612     682 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.045
        SIN1  46 kkvegsggqversevefsdypglDlsddedvgssqsydIqsysevgihrfrsnTaq 101
                 k++ ++g++ e+  +efsdy + D+ dd+ ++ +  +   s ++  ++  + nT q
  EPX71300.1   6 KNQAREGTPDEDL-EEFSDYSEGDDYDDDLYTPTARVRASSTNNSKAKSTDRNTQQ 60 
                 3344444554444.59********************99999999999999999977 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 0.0001
        SIN1  21 ktylrksqeavaedtasalrkpsdtkkvegsggqversevefsdypglDlsddedv.gssqsydIqsysevgihrfrs 97 
                 + +    +e+++e+++s+   + + +++++++g+  +   +f+  +   l+++ed+ +  + ++I+ ys  +i++ r 
  EPX71300.1 217 QSK----PESSKEQQHSEEASSVTGNQQNETSGENGQDSSDFLFSAVVGLQEEEDDeDAVHLFEIKHYSVETIKK-RC 289
                 222....2223333333333333333333333333333459**************835689********999999.76 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.1
        SIN1  72 ddedvgssqsydIqsysevgihrfrsnTaqklErldiakrk 112
                 d++ +       Iq +s+ g +r     aq+l r+  akr+
  EPX71300.1 618 DTSIDLPEATCLIQISSHYGSRR---QEAQRLGRILRAKRR 655
                 555666777778***********...679*****9888886 PP

>> AAA_34  P-loop containing NTP hydrolase pore-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   6.4e-05      0.13     109     186 ..     386     454 ..     336     477 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 6.4e-05
      AAA_34 109 lkdigaseievvalnklkegkkikeseelkeGvlFvtYstliseskkkkksrleqlveWlgedfdGvivfDEchkakn 186
                 +++i+a+     +++ +++ +k  e+ + + Gv+ +tYs+  +++++++    +++++ l     G+i++DE h +  
  EPX71300.1 386 WSNIKAD-----HIAVFTADHK--ERFHSEAGVVVSTYSMVANTRNRSY--DSQKMMDFLTGREWGFILLDEVHVVPA 454
                 3333333.....3333433333..355889***********99988855..77999****98889*********8755 PP

>> FlgD  Flagellar hook capping protein - N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00013      0.26       2      49 ..      45      95 ..      43     101 .. 0.85
   2 ?   -0.6   2.4      0.86   1.7e+03       4      32 ..     227     255 ..     218     256 .. 0.65

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00013
        FlgD  2 aeaqsaataaaeasrqtsdksegeltqddFLkLLtaqLknQD.Pl..nPmD 49
                ++++s+a++++ +++q  ++ +++ +q+dF +LL   L +Q  Pl  nP+D
  EPX71300.1 45 STNNSKAKSTDRNTQQVPTGVSSMFGQNDFSALLGLKLDHQArPLwiNPVD 95
                67888999999999999***********************95466666666 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.86
        FlgD   4 aqsaataaaeasrqtsdksegeltqddFL 32 
                 + s+++++ + ++q++++ e+  +++dFL
  EPX71300.1 227 QHSEEASSVTGNQQNETSGENGQDSSDFL 255
                 33344555556666677777788888997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (801 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       887  (0.0494729); expected 358.6 (0.02)
Passed bias filter:                      567  (0.0316247); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.74u 0.29s 00:00:01.03 Elapsed: 00:00:00.47
# Mc/sec: 5103.16
//
Query:       EPX71301.1  [L=88]
Description: hypothetical protein SOCG_01520 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       322  (0.0179597); expected 358.6 (0.02)
Passed bias filter:                      268  (0.0149478); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.28s 00:00:00.67 Elapsed: 00:00:00.44
# Mc/sec: 605.00
//
Query:       EPX71302.1  [L=230]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.5e-05   24.5   0.0    0.00019   22.1   0.0    2.0  1  Methyltransf_12  Methyltransferase domain
    0.00019   21.3   0.0    0.00027   20.8   0.0    1.2  1  Methyltransf_23  Methyltransferase domain
     0.0009   19.9   0.0       0.41   11.4   0.0    2.3  2  Methyltransf_25  Methyltransferase domain
     0.0016   19.0   0.0      0.024   15.3   0.0    2.2  1  Methyltransf_11  Methyltransferase domain
     0.0045   16.8   0.0        1.4    8.7   0.0    2.2  2  Methyltransf_31  Methyltransferase domain


Domain annotation for each model (and alignments):
>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0   5.2e-08   0.00019       2      93 ..      55     172 ..      54     174 .. 0.85

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 5.2e-08
  Methyltransf_12   2 eiGcGtGsllrallekl............................pdieytgvDispsaiedakeklakrennnnnnvelealdlldldgg... 64 
                      ++ cG+G+++++++e                              p+i++++ D+ +          + + +  + n++++++ +++l+++   
       EPX71302.1  55 DLACGSGEITQVVREWEslgkkvlsegvasrtkrklsvreipsnfPPIQIVAADPYTGEA------YKNNVGVPCFNLNFQDIADGKLPPSege 142
                      788888888888888888888888888888888888888888888999999999999888......6777777778888888888888887999 PP

  Methyltransf_12  65 .ssfDlvvasnvlhhlkdirevldnirklL 93 
                       + +Dlv++s++lh l d+ ++++ +++l 
       EPX71302.1 143 dGIYDLVICSFALHLLTDPSKLFATCYALA 172
                      99************************9986 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.0   7.7e-08   0.00027      25     136 ..      52     196 ..      24     228 .. 0.69

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 7.7e-08
  Methyltransf_23  25 rvLdiGcGtGillevlre............................ngf..svtgvDlspeaveiaekakkaqkdqfdeqeaae........pq 80 
                       ++d++cG+G+ ++v re                            n+   ++++ D++     +  +    +  + + q++a+        ++
       EPX71302.1  52 HIVDLACGSGEITQVVREweslgkkvlsegvasrtkrklsvreipsNFPpiQIVAADPYTGEAYK--NNVGVPCFNLNFQDIADgklppsegED 143
                      689*************9977777777777777777777777666653224588888887653333..455555555555566666666666677 PP

  Methyltransf_23  81 gkfdlIvlrevlehvpdppellrqiatllkpgGylllseplaslkedrllldwlyl 136
                      g +dl+++++ l+ + dp +l+++ ++l +   +ll+  p   +k+  l  +w+++
       EPX71302.1 144 GIYDLVICSFALHLLTDPSKLFATCYALAAQCRWLLIVGP---HKQPVLKPEWGWI 196
                      7**************************9998899999888...5666666666554 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.0    0.0036        13       1      17 [.      53      69 ..      53     108 .. 0.88
   2 !   11.4   0.0   0.00011      0.41      57      92 ..     135     171 ..     101     174 .. 0.71

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0036
                     EEEET-TTSHHHHHHHC CS
  Methyltransf_25  1 vLdlGcGtGrltlalak 17
                     ++dl+cG+G++t+ + +
       EPX71302.1 53 IVDLACGSGEITQVVRE 69
                     89********9987765 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00011
                      GBSS...STTTEEEEEEESTGGGSSHHHHHHHHHHHHHH CS
  Methyltransf_25  57 dlpf...edgsfDlvvssgalhhlsdedlekalkeiarv 92 
                      +lp    edg +Dlv++s+alh+l+d+   k+++ ++ +
       EPX71302.1 135 KLPPsegEDGIYDLVICSFALHLLTDPS--KLFATCYAL 171
                      3553334899*************99654..888887765 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   6.6e-06     0.024      46      85 ..     127     169 ..      54     174 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 6.6e-06
                      EETTEECCCTS...S-TT-EEEEEEES-CCC-CCHHHHHHHHH CS
  Methyltransf_11  46 efvvadaeklp...fednsfDlvvssevlhhvedpekalkeia 85 
                      +f+     klp    ed+ +Dlv++s++lh + dp+k+++ ++
       EPX71302.1 127 NFQDIADGKLPpseGEDGIYDLVICSFALHLLTDPSKLFATCY 169
                      4444444445434457899*********************998 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.0   0.00039       1.4       6      23 ..      52      69 ..      48      80 .. 0.81
   2 !    6.0   0.0    0.0026       9.4      63      94 ..     131     165 ..     118     186 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00039
  Methyltransf_31  6 rvlDlGCGtGeltfelae 23
                     +++Dl+CG+Ge+t +  e
       EPX71302.1 52 HIVDLACGSGEITQVVRE 69
                     799**********99886 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.0026
  Methyltransf_31  63 iee..lekl.ledekfDlilsnevlnaladpdkil 94 
                      i +  l+ +  ed  +Dl+++  +l++l+dp k +
       EPX71302.1 131 IADgkLPPSeGEDGIYDLVICSFALHLLTDPSKLF 165
                      444446666678899****************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       317  (0.0176809); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1728.89
//
Query:       EPX71303.1  [L=520]
Description: spore wall assembly peptidase Mde10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.8e-26   93.5   0.1    1.8e-26   93.5   0.1    2.8  3  Reprolysin_5   Metallo-peptidase family M12
    3.4e-21   75.8   0.0    9.9e-16   58.0   0.0    2.3  2  Reprolysin_4   Metallo-peptidase family M12B Reprolysin-like
    7.4e-17   61.9   4.2    9.6e-17   61.5   0.2    2.6  2  Reprolysin_2   Metallo-peptidase family M12B Reprolysin-like
    8.9e-17   61.7  33.9    8.9e-17   61.7  33.9    4.3  4  Disintegrin    Disintegrin
    3.4e-05   23.9   0.3    3.4e-05   23.9   0.3    2.7  2  Reprolysin     Reprolysin (M12B) family zinc metalloprotease
     0.0022   18.5   0.4     0.0043   17.6   0.0    1.9  2  Reprolysin_3   Metallo-peptidase family M12B Reprolysin-like
  ------ inclusion threshold ------
      0.028   14.3   0.0      0.054   13.3   0.0    1.4  1  Peptidase_M10  Matrixin


Domain annotation for each model (and alignments):
>> Reprolysin_5  Metallo-peptidase family M12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.65   1.7e+03       5      30 ..      12      42 ..      11      59 .. 0.69
   2 !   93.5   0.1   6.9e-30   1.8e-26       5     191 ..      68     286 ..      64     293 .. 0.84
   3 ?   -7.9   7.3         7   1.8e+04     162     174 ..     340     359 ..     337     388 .. 0.67

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.65
  Reprolysin_5  5 vallvaaDcsfvaafggda.....aaqaniv 30
                  v+llv+a++++ ++f  +       +q++ +
    EPX71303.1 12 VRLLVHATYRYGSEFLHNFpdskrTLQDWNA 42
                  7999*******99996665654554444444 PP

  == domain 2  score: 93.5 bits;  conditional E-value: 6.9e-30
  Reprolysin_5   5 vallvaaDcsfvaafggdaaaqanivnlvnrasnvyeresnislglanvtildeedpstase.......asstgdaselLnefq............. 81 
                     l + aDcs+ ++f +  +a++ i++ ++++s+ y r++ + +++ ++t  ++ed+  +++        ++t + +e Ln+f+             
    EPX71303.1  68 LWLGIEADCSYLSQFTSRVEAKKHILQEIEKVSSLYDRSFHVYVQVLQLTLPSSEDCFVRKSvsengagFDKTASLEEKLNSFTkrktdtkfeknhl 164
                   455699*********88558********************999999999999999988887789999887888888889999989999********* PP

  Reprolysin_5  82 ...........sassalrgqqnddlailflmtnfsggvGlAwlgqlcnsgs...agsvstrveksnsvvvstatevqvvaHElGHnfGavHDcdsss 164
                              +++++++ + ++    l++  +++++ G++w +++cn  +   ++ v        svv    +++ v+aHElGH fG  HDcd++s
    EPX71303.1 165 ipnpkylslpsEDATSQTVSPQA-WLLLTTSNDTKEK-GISWFATICNGFTiedGWHVGP-----SSVVAAYPNDWPVIAHELGHIFGLIHDCDKKS 254
                   ********977666666666665.5556666677888.*********9665333444444.....489999************************99 PP

  Reprolysin_5 165 ....esqsCslsnstepaggryiMapsss.pn 191
                       ++++C+ls++ ++a+g y+M ps+s p+
    EPX71303.1 255 cqdpNESCCPLSQALCDAQGLYVMHPSNSyPR 286
                   ***************************99643 PP

  == domain 3  score: -7.9 bits;  conditional E-value: 7
  Reprolysin_5 162 sss.esqsCslsn......s 174
                   +++ ++++C++++      +
    EPX71303.1 340 DDCsQNPCCDGKTckyaagA 359
                   55555788887654433343 PP

>> Reprolysin_4  Metallo-peptidase family M12B Reprolysin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   3.9e-06    0.0099       4      90 ..      67     157 ..      64     169 .. 0.87
   2 !   58.0   0.0   3.9e-19   9.9e-16      96     191 ..     188     296 ..     178     306 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 3.9e-06
  Reprolysin_4   4 vvrvavavdpeyvaelgsvdevraainalvtvlnevYgrdlnvrLeli.....sdqdviytdsetdsfaadisgedlgnsslatltstrdsk 90 
                   +  +++ +d++y  +++s  e+++ i + +  ++ +Y+r + v  ++      s +d+   +s +++ a  + +  l +++l+ +t+ +   
    EPX71303.1  67 TLWLGIEADCSYLSQFTSRVEAKKHILQEIEKVSSLYDRSFHVYVQVLqltlpSSEDCFVRKSVSENGAGFDKTASL-EEKLNSFTKRKTDT 157
                   56689*************************************98877777788**********99999999999888.99999999876554 PP

  == domain 2  score: 58.0 bits;  conditional E-value: 3.9e-19
  Reprolysin_4  96 allrdtrasqqnvgvawvgalcls..arq.nkka..sgvaasrdeydifAHEiGHtfGaaHdls........degeglsskteegsgqtIMsyasea 179
                    ll+ t  + ++ g++w   +c      +  + +  s+vaa  +++ ++AHE GH fG+ Hd++        +++++ls++ ++++g ++M + + +
    EPX71303.1 188 WLLLTTSNDTKEKGISWFATICNGftIEDgWHVGpsSVVAAYPNDWPVIAHELGHIFGLIHDCDkkscqdpnESCCPLSQALCDAQGLYVMHPSNSY 284
                   455556567788**********6674333445444578888899***************************99************************ PP

  Reprolysin_4 180 sqeafapisirl 191
                    ++ f+ +si  
    EPX71303.1 285 PRHRFSDCSILQ 296
                   *********965 PP

>> Reprolysin_2  Metallo-peptidase family M12B Reprolysin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.5   0.2   3.7e-20   9.6e-17      68     192 ..     179     301 ..      86     303 .. 0.64
   2 ?   -2.9   0.6       2.1   5.4e+03     138     162 ..     358     382 ..     356     388 .. 0.74

  Alignments for each domain:
  == domain 1  score: 61.5 bits;  conditional E-value: 3.7e-20
  Reprolysin_2  68 gekdydlahlvllgtf.sggvlGLayvgqicqkeassrktntglsttansgsaveetkeidvvaHEvGHaFGatHdndgssasegveenaats..ve 161
                    ++  +   ++ll+t     + G+ +   ic ++ +      g   + +s      ++++ v+aHE+GH+FG  Hd+d +s+++  e + + s   +
    EPX71303.1 179 TSQTVSPQAWLLLTTSnDTKEKGISWFATIC-NGFTI---EDGWH-VGPSSVVAAYPNDWPVIAHELGHIFGLIHDCDKKSCQDPNESCCPLSqaLC 270
                   4444444444444444499999*********.66666...56665.33444444449*********************996654444444444335* PP

  Reprolysin_2 162 daggkfiMapasksnndlFSpcsislisdvl 192
                   da+g ++M p++      FS+csi ++ ++l
    EPX71303.1 271 DAQGLYVMHPSNSYPRHRFSDCSILQLHSLL 301
                   ************************9988765 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2.1
  Reprolysin_2 138 GatHdndgssasegveenaatsved 162
                   Ga+ d+  +s++++++   a  v+ 
    EPX71303.1 358 GAVCDDSKDSCCKNCQLSRAGMVCR 382
                   8899999999999998877766654 PP

>> Disintegrin  Disintegrin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   2.0     0.093   2.4e+02      20      42 ..     250     273 ..     245     297 .. 0.58
   2 !   61.7  33.9   3.5e-20   8.9e-17       1      76 []     331     404 ..     331     404 .. 0.94
   3 ?   -4.3   8.6         7   1.8e+04      25      55 ..     413     437 ..     407     455 .. 0.42
   4 ?    4.1   6.4     0.032        82       6      48 ..     445     489 ..     441     508 .. 0.74

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.093
  Disintegrin  20 cdaktCklkkgaqC..sageCckek 42 
                  cd+k+C+  +++ C  s ++ c+++
   EPX71303.1 250 CDKKSCQDPNESCCplS-QALCDAQ 273
                  66677777766666533.3344433 PP

  == domain 2  score: 61.7 bits;  conditional E-value: 3.5e-20
  Disintegrin   1 eegEecDcGaeeeckkdkCcdaktCklkkgaqC..sageCckekCklksagtvCreakdeeCdleeyCdGksaeCped 76 
                  e +EecDcG  ++c++++Ccd ktCk ++ga+C  s+++Cck +C+l++ag+vCr+a+ + Cd +e+C+GksaeCp+d
   EPX71303.1 331 EGDEECDCG--DDCSQNPCCDGKTCKYAAGAVCddSKDSCCK-NCQLSRAGMVCRKASGS-CDKPEFCTGKSAECPKD 404
                  678******..89*99*****************866699***.8************9888.***************97 PP

  == domain 3  score: -4.3 bits;  conditional E-value: 7
  Disintegrin  25 Ckl.kkgaqCsageCckek..CklksagtvCrea 55 
                  C+l +++  C++g+C + +  C+         e 
   EPX71303.1 413 CSLpNANGYCASGKCTSPSeqCR---------EL 437
                  44433344454555544333333.........32 PP

  == domain 4  score: 4.1 bits;  conditional E-value: 0.032
  Disintegrin   6 cDcGaeee.c.kkdkCcdaktCklkkgaqCsageCckekCklksa 48 
                  c  G+ +  c +++  c++++ +  +g++C+ g C++ +C   ++
   EPX71303.1 445 CQPGSCKVsCmNDNGVCYSSSMNYLDGTRCAGGLCYNGNCIPVEE 489
                  77776555675677889999999999****99********76544 PP

>> Reprolysin  Reprolysin (M12B) family zinc metalloprotease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.3   1.3e-08   3.4e-05      90     195 ..     187     311 ..     175     314 .. 0.63
   2 ?   -7.0   4.9         7   1.8e+04     139     158 ..     318     344 ..     315     368 .. 0.66

  Alignments for each domain:
  == domain 1  score: 23.9 bits;  conditional E-value: 1.3e-08
                 EEEEESS--STTSSEEE-TT-TTST.STSEEEEE--SSSHHHHHH...HHHHHHHHHCT---GHH.TTS-......-S.TTS-B......TTST.TTTS CS
  Reprolysin  90 aqLlsgkefekktvGaayvgglCsk.eksggvaedkkknlealav...ilaqeLghnlGlthdee.keCk......ce.ekgvC......iMneeagss 170
                 a Ll  ++  +k+ G++ + ++C+  + + g +  +++ + a  +   ++a+eLgh +Gl hd + k+C+      c+ +++ C      +M++  ++s
  EPX71303.1 187 AWLLLTTSNDTKEKGISWFATICNGfTIEDGWHVGPSSVVAAYPNdwpVIAHELGHIFGLIHDCDkKSCQdpnescCPlSQALCdaqglyVMHP--SNS 283
                 66777777777788888888888861223333333333333332244489************98875564222222446444445555559999..444 PP

                 ---.C--HHHHHHHHHHCCTC..GGGGG CS
  Reprolysin 171 sgv.kFskcsiedfeqflkkq..kgaCL 195
                  ++  Fs+csi +++++l k+  + +CL
  EPX71303.1 284 YPRhRFSDCSILQLHSLLAKNyiSFSCL 311
                 45549************99872234566 PP

  == domain 2  score: -7.0 bits;  conditional E-value: 7
                 HHHHCT---GHH....TTS--S...TT CS
  Reprolysin 139 LghnlGlthdee....keCkce...ek 158
                 +g+ lG+  + +    +eC+c    ++
  EPX71303.1 318 VGIRLGMCGNGIvegdEECDCGddcSQ 344
                 566777766655555568999544433 PP

>> Reprolysin_3  Metallo-peptidase family M12B Reprolysin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   1.7e-06    0.0043      69     124 .]     190     249 ..      91     249 .. 0.81
   2 ?   -3.7   0.1       6.4   1.7e+04      70     101 ..     466     498 ..     450     506 .. 0.62

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 1.7e-06
  Reprolysin_3  69 lftardesgvgGlAyvgsvcnsskk...agvnsgs.svlgkvga.....dtvaHEiGHnfganHt 124
                   l+t+++  +  G+ ++ ++cn            g  sv+    a      ++aHE+GH fg+ H+
    EPX71303.1 190 LLTTSNDTKEKGISWFATICNGFTIedgW--HVGPsSVVA---AypndwPVIAHELGHIFGLIHD 249
                   55666667889999999999876554331..222202222...1234569**************7 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 6.4
  Reprolysin_3  70 ftarde.sgvgGlAyvgsvcnsskkagvnsgss 101
                   +++ d  +  gGl y g+  +++++ + ++ ++
    EPX71303.1 466 MNYLDGtRCAGGLCYNGNCIPVEETSAATWRKQ 498
                   444444556677777777766666666666665 PP

>> Peptidase_M10  Matrixin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   2.1e-05     0.054     108     131 ..     231     254 ..     208     261 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 2.1e-05
                    EHHHHHHHHHHHHTTBESXSSTTS CS
                    xxxxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_M10 108 slflVaaHEiGHalGLeHssdkda 131
                    +   V aHE+GH+ GL H  dk++
     EPX71303.1 231 NDWPVIAHELGHIFGLIHDCDKKS 254
                    456799************988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (520 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       926  (0.0516482); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.60u 0.30s 00:00:00.89 Elapsed: 00:00:00.45
# Mc/sec: 3455.74
//
Query:       EPX71304.1  [L=388]
Description: 60S ribosomal protein L3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   1.9e-191  635.9   7.1   2.2e-191  635.7   7.1    1.0  1  Ribosomal_L3  Ribosomal protein L3
  ------ inclusion threshold ------
       0.42   10.4   1.7       0.86    9.5   0.5    2.1  2  Tho1_MOS11_C  Tho1/MOS11 C-terminal domain


Domain annotation for each model (and alignments):
>> Ribosomal_L3  Ribosomal protein L3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  635.7   7.1  2.4e-195  2.2e-191       1     369 []       1     366 [.       1     366 [. 1.00

  Alignments for each domain:
  == domain 1  score: 635.7 bits;  conditional E-value: 2.4e-195
                   XX.S.SXXXXSSXCCCTTXSBXSXSSXXXSX.XXSBTTTTTXBSEEEEEEEEEEEEEEECHHTTSCCCCCEEEEEEEEEEC--EEEEEEEEEEEETT CS
  Ribosomal_L3   1 mshrkfeaprhgslGflprkRaerergkvksfPkddtskpvkltaflGyKaGmthiVrevdkpgskldkkevveavtvvetppmvivgvvgyvetpr 97 
                   msh+k+e+pr+gslGflprkRa+r rgkvk+fPkdd+skpv+ltaflGyKaGmthiVr++d+pgsk++k+e++eavtv+etppmv+vgvvgyvetpr
    EPX71304.1   1 MSHCKYEHPRLGSLGFLPRKRASRVRGKVKAFPKDDSSKPVHLTAFLGYKAGMTHIVRDLDRPGSKMHKREILEAVTVIETPPMVVVGVVGYVETPR 97 
                   9************************************************************************************************ PP

                   EEEEEEEEESSS.SHHHHCCCSTSTTTSSSSSSHCCCCHCSSCCCCCCHHHHHHHHHHSCSCEEEEEEEECCCSS-SCCSSHHEEEEECHCSCHHHH CS
  Ribosomal_L3  98 GlrslktvwaehlseevkrrlyknwykskkkaftkyskkyeskdvkklieadleeikkeasvvrviahtvirktkslaqKkahllEiqvngGtiaek 194
                   Glrsl+tvwaehlseevkrr+yknw+kskkkaftky+kky   ++++++ ++le+ikk++svvrv+aht+irkt+ laqKkahl+Eiq+ngG++a+k
    EPX71304.1  98 GLRSLTTVWAEHLSEEVKRRFYKNWFKSKKKAFTKYAKKY--SENTQSLSRELERIKKYCSVVRVLAHTQIRKTP-LAQKKAHLMEIQINGGSVADK 191
                   ****************************************..9999*****************************.********************* PP

                   HHHHHHCCTCEEECCCCS-TTSEEEEEEEE---EEE-HHHHCT----STTTSSSSSS-S-SS-SSSSS--TTS--SEEESCCEEEEEEEEEEEEETT CS
  Ribosomal_L3 195 ldfarealektvavaavFrqgeliDvigvtkGkGfeGvvkRWgvkklprkthrglRkvaaigawdparVsstvaraGqkGyhhRtelnkkiyrigkg 291
                   +++are++ektv+v+++F+q+e++Dvi+vt+GkG eG++ RWg+k+lprkthrglRkva+igaw+pa+V++tv+raG++Gy+hRt+ln+kiyr+g+g
    EPX71304.1 192 VEWAREHFEKTVDVKSTFEQNEMVDVIAVTRGKGAEGTTGRWGTKHLPRKTHRGLRKVACIGAWHPANVQWTVPRAGNAGYMHRTQLNSKIYRVGSG 288
                   ************************************************************************************************* PP

                   TSSTTTSSTTT.SS..SS.TTTCTTCB..TSCEEEEES--SSSTTEEEEEEE-SSGGGSCCCSS-EEEEEE-TTCTSS CS
  Ribosomal_L3 292 edaknastefdltekeitPmGGfvhyGevkndfilvkGsvpGpkkrlvklrkslltqtsrkaeeevslkfidtaskfg 369
                   ed+knast+fd+tek+itPmGGfv+yG v+nd+i+++G++pGp kr++++rksl+t+tsrka+e v+lk+idtaskfg
    EPX71304.1 289 EDSKNASTDFDATEKRITPMGGFVRYGAVDNDYIMLNGATPGPVKRIMTIRKSLITHTSRKALEAVNLKWIDTASKFG 366
                   ****************************************************************************98 PP

>> Tho1_MOS11_C  Tho1/MOS11 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.5   9.6e-05      0.86      19      42 ..     134     154 ..     124     155 .. 0.85
   2 ?   -2.1   0.0      0.39   3.5e+03       9      25 ..     351     368 ..     348     377 .. 0.66

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 9.6e-05
  Tho1_MOS11_C  19 akKFgqeeeaidelekqleRieKF 42 
                   akK++++    ++l ++leRi+K+
    EPX71304.1 134 AKKYSENT---QSLSRELERIKKY 154
                   78887666...89**********8 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.39
  Tho1_MOS11_C   9 ielLekk.lkRakKFgqe 25 
                   +e  + k +  a KFg +
    EPX71304.1 351 LEAVNLKwIDTASKFGHG 368
                   555554446678899876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (388 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1083  (0.0604049); expected 358.6 (0.02)
Passed bias filter:                      685  (0.0382063); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.44
# Mc/sec: 2661.57
//
Query:       EPX71305.1  [L=437]
Description: RNA lariat debranching enzyme Dbr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.3e-36  126.0   0.9      2e-36  125.5   0.1    1.7  2  DBR1         Lariat debranching enzyme, C-terminal domain
    6.9e-08   33.2   0.5    1.1e-07   32.5   0.5    1.4  1  Metallophos  Calcineurin-like phosphoesterase


Domain annotation for each model (and alignments):
>> DBR1  Lariat debranching enzyme, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.1       0.8   7.2e+03     114     114 ..     253     253 ..     215     280 .. 0.50
   2 !  125.5   0.1   2.2e-40     2e-36       2     137 ..     288     417 ..     287     419 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 0.8
        DBR1 114 e 114
                 +
  EPX71305.1 253 K 253
                 1 PP

  == domain 2  score: 125.5 bits;  conditional E-value: 2.2e-40
        DBR1   2 ktTrFLALDKclpkrdFLqvleieseaaeekeeeskkleLeyDpewLaItratnkllslsrsqaklpedkeaelaelieeelawveenivekgklkipe 100
                 +tT+FLALDKclp+r++++vlei++     ++ ++++l ++yDpewL+I+ra+ ++ s   +q++lp+   +el++li++e++w+e+n+v+k+kl i +
  EPX71305.1 288 STTQFLALDKCLPRRSYFEVLEIDPT----ESFQDGDLYMKYDPEWLSIVRAMMPFQSSLVKQTPLPS--MDELQNLIKKERQWIEDNVVQKNKLGILR 380
                 69************************....8899*************************888899999..89*************************** PP

        DBR1 101 nFertaPageee.aeekeqpkeytNpQteafcellgie 137
                 nF+ taP  ++   +ek+ p+ y NpQt++f++l+g++
  EPX71305.1 381 NFTPTAP-FHSSgITEKTIPATYVNPQTTSFLQLIGLQ 417
                 *******.56677999********************86 PP

>> Metallophos  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.5   0.5   1.3e-11   1.1e-07       2     203 ..       2     223 ..       1     224 [. 0.64

  Alignments for each domain:
  == domain 1  score: 32.5 bits;  conditional E-value: 1.3e-11
                  EEEEEESBTBTTCCTHHHHHHHHHHHHHHHTTESEEEEEST......SSSSS..HHHHHHHHHHHHHHHH......TSEEEEEC-TTSCHHHHHHHHH CS
  Metallophos   2 rilvigDlHlalgggqlddllkllddllreekpdlvllaGD......lvdrg..dlekellellaalvky......pipvylllGNHegfeeellnky 85 
                  ++ + g +H     g ld+l  l ++    +++ l+++ GD      l d    ++++++ +l ++   y      pi  +++ GNHe  + ++l+  
   EPX71305.1   2 KVGIQGCCH-----GILDNLYSLASK----HNVELLIIGGDfqairnLSDFHgiSVPQKFKRLGDFHKYYsqekiaPILTVFVGGNHE-AS-NYLEEL 88 
                  666777777.....777777777744....5**********888777555547766666888876666668888778888********.33.333333 PP

                  HHHHHHHHHHEHHHCEEETSEEEEEETTE.....EEEEEEESECEEE..........THHHHHHHHHHHSCHHHHCC........HHHHHH...HHHH CS
  Metallophos  86 gylgifsepwrsdaevfnnlplaslgsgs.....lkvlllhGgspel..........lvsldklgslnleleapepg........dewlkd...lekr 157
                    +g + +p+ ++ +  + + +  l  g       ++   +G ++ +                     + +e +           d++l++      +
   EPX71305.1  89 -PFGGWIAPNIYYMGRSSVIRVGNLRIGGisgiySEFDYRKGRYE-RlpyeykmlksV---------YHTREFDVLSlksfrspvDIFLSHdwpRGIE 175
                  .45667777777766666666666333333453344444444433.233323333441.........3333333322334444454444444433377 PP

                  TTCSEEEEEESSESS..CSSSCSCCHHHHHHHHHHTTESEEEEESSSS CS
  Metallophos 158 ekadwvivlgHsply..rgsgylfgdealedllkkygvdlvisGHtHv 203
                   ++d++ +l  +p    +   +  g++ale++l+  ++ +++ +H H+
   EPX71305.1 176 QHGDTIKLLKNKPFFrkEVERNDLGSPALEEILNSIKPRHWFAAHLHT 223
                  777777777777777999999**************************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (437 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       570  (0.0317921); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 3087.87
//
Query:       EPX71306.1  [L=148]
Description: meiotic recombination protein Rec25 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.035   13.3   0.2      0.085   12.1   0.0    1.7  2  UvdE      UV-endonuclease UvdE
      0.057   13.6   0.1        9.4    6.5   0.0    2.3  2  DUF3861   Domain of Unknown Function with PDB structure (DUF3


Domain annotation for each model (and alignments):
>> UvdE  UV-endonuclease UvdE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   9.5e-06     0.085     238     271 ..      36      69 ..      12      75 .. 0.82
   2 ?   -1.2   0.0       0.1   9.3e+02      33      52 ..      94     113 ..      71     130 .. 0.57

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 9.5e-06
        UvdE 238 erkgikqkvHlSepldgkavrahkdrkhadrvld 271
                 e+  +k k+HlS++++g++ r+++d+k++ ++++
  EPX71306.1  36 EECTLKTKQHLSDAIQGNDSREKSDYKNETLLIK 69 
                 456789**********************998876 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.1
        UvdE  33 keklkelakaNlkdllkllk 52 
                 + +l+++ ++N kdll++l+
  EPX71306.1  94 QTNLQSIDRENGKDLLNILE 113
                 34455555555555555544 PP

>> DUF3861  Domain of Unknown Function with PDB structure (DUF3861)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.0     0.001       9.4      40      71 ..      13      45 ..      10      50 .. 0.87
   2 ?    5.0   0.0     0.003        27      24      47 ..      99     122 ..      76     129 .. 0.80

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.001
     DUF3861 40 lkkkedld.adeaaalavglkLlgevmlknrkn 71
                +k+ e+++ ++ ++a+a + +Ll+e  lk +++
  EPX71306.1 13 IKQFEKFSeKEVSEAVAYSNRLLEECTLKTKQH 45
                67778898778899***************9987 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.003
     DUF3861  24 eFeaenhdDilkiverlkkkedld 47 
                 +++ en  D+l+i+e+l k++   
  EPX71306.1  99 SIDRENGKDLLNILEQLSKETSTA 122
                 5788999**********9987655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1467  (0.0818227); expected 358.6 (0.02)
Passed bias filter:                      514  (0.0286686); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 1039.18
//
Query:       EPX71307.1  [L=949]
Description: peroxin-6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.4e-49  167.9   0.0    6.7e-45  152.7   0.0    2.6  2  AAA           ATPase family associated with various cellular 
    3.9e-07   29.8   0.2    1.4e-06   28.0   0.2    2.0  1  AAA_lid_3     AAA+ lid domain
    2.7e-05   24.6   0.8     0.0018   18.7   0.1    2.9  3  AAA_16        AAA ATPase domain
    2.8e-05   23.9   0.0    5.7e-05   22.9   0.0    1.5  1  RuvB_N        Holliday junction DNA helicase RuvB P-loop doma
    0.00046   20.1   0.0     0.0024   17.8   0.0    2.3  2  Vps4_C        Vps4 C terminal oligomerisation domain
    0.00056   20.3   0.0     0.0021   18.4   0.0    2.0  1  RNA_helicase  RNA helicase
    0.00085   18.6   0.0     0.0015   17.8   0.0    1.3  1  TIP49         TIP49 P-loop domain
     0.0015   18.8   0.0     0.0058   16.9   0.0    2.1  1  AAA_22        AAA domain
     0.0017   18.5   0.0     0.0036   17.4   0.0    1.6  1  AAA_2         AAA domain (Cdc48 subfamily)
      0.002   18.2   0.1     0.0086   16.1   0.1    2.2  1  AAA_5         AAA domain (dynein-related subfamily)
     0.0089   16.2   0.0      0.019   15.1   0.0    1.5  1  AAA_33        AAA domain
  ------ inclusion threshold ------
      0.012   15.0   0.1      0.029   13.7   0.1    1.5  1  Mg_chelatase  Magnesium chelatase, subunit ChlI
      0.012   15.3   0.0      0.033   13.9   0.0    1.7  1  IstB_IS21     IstB-like ATP binding protein
      0.013   15.6   0.0      0.076   13.0   0.0    2.4  1  AAA_14        AAA domain
      0.019   15.0   0.1      0.074   13.1   0.0    2.0  1  TsaE          Threonylcarbamoyl adenosine biosynthesis protei
      0.025   15.1   0.0        0.1   13.2   0.0    2.1  1  AAA_18        AAA domain
       0.03   13.9   0.4       0.19   11.3   0.2    2.1  2  AAA_25        AAA domain
       0.04   13.0   0.0      0.067   12.3   0.0    1.3  1  Parvo_NS1     Parvovirus non-structural protein NS1
      0.042   13.7   0.0       0.15   11.9   0.0    1.9  2  AAA_3         ATPase family associated with various cellular 
      0.057   13.1   0.0       0.11   12.2   0.0    1.4  1  YecM          YecM protein
      0.057   12.8   0.0       0.11   11.8   0.0    1.4  1  ATPase        KaiC
      0.088   12.3   0.1       0.32   10.4   0.1    1.9  1  PhoH          PhoH-like protein
      0.095   12.2   0.0        0.2   11.1   0.0    1.5  1  AAA_7         P-loop containing dynein motor region
       0.12   12.1   0.0       0.28   10.9   0.0    1.5  1  AAA_24        AAA domain


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   0.0    0.0002      0.15      15     120 ..     432     534 ..     430     544 .. 0.88
   2 !  152.7   0.0     9e-48   6.7e-45       1     130 [.     681     812 ..     681     814 .. 0.97

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.0002
                 HHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTSSSTEEEEEEESSGG CS
         AAA  15 akavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkkeskvivigatnrpd 113
                 ++ + ++lg++++++s+ +l++    +  +ki e++k ++++    i++i ++  l    +gs ++++++++  + ++l+ +    ++  +ig++ +++
  EPX71307.1 432 VSCISSNLGIPLFSVSCYDLVDLDKTKVTSKITEFLKPLSRHL-YGIILIKDLNVLSLPIEGSINNVNSKLITIFKEKLNLFHY--NRYAIIGVASNVE 527
                 66788999*************7778889999999999999887.8***********8888888899999999999999999988..689********** PP

                 GSTHHHH CS
         AAA 114 kldpall 120
                 +++++++
  EPX71307.1 528 NIPEEIM 534
                 ****998 PP

  == domain 2  score: 152.7 bits;  conditional E-value: 9e-48
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHH..TTCCCHHHHHHHHHHHHHHHHTT CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr..sgseseeeervvnqLlteldgvk 97 
                 vllyGppGtGKTllakava+el+ +fl+++g+ell++yvgese+++re+f++ak+ a p+i+f+DE+d++a++r  s+++ ++ +r+v+qLl+eld v 
  EPX71307.1 681 VLLYGPPGTGKTLLAKAVATELSLSFLSVKGPELLNMYVGESEANMREIFTKAKNAA-PCIIFFDELDSVAPKRgdSSDSGNVMDRIVSQLLAELDSVH 778
                 79****************************************************999.****************99889999***************** PP

                 TSSSTEEEEEEESSGGGSTHHHHS.TTSSEEEET CS
         AAA  98 kkeskvivigatnrpdkldpallr.gRfdrkiei 130
                 k+++ v+ igatnrpd ldp llr gRfd+ +++
  EPX71307.1 779 KSDKFVFAIGATNRPDLLDPSLLRpGRFDKMVYL 812
                 **999************************99886 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   0.2   1.9e-09   1.4e-06       1      40 [.     837     877 ..     837     881 .. 0.93

  Alignments for each domain:
  == domain 1  score: 28.0 bits;  conditional E-value: 1.9e-09
   AAA_lid_3   1 dvdlkeLAe.rTeGySGADlaalcreAallAlrrgikeitm 40 
                 dv++ ++A+  T++ +GADl alc  A  lAl+r+++ei++
  EPX71307.1 837 DVNFYDIAKqCTNNLTGADLYALCADALSLALKRKTTEIEE 877
                 899******88889**********************99875 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.1   2.4e-06    0.0018      25      57 ..     679     708 ..     669     720 .. 0.82
   2 ?    2.8   0.0      0.19   1.4e+02     123     148 ..     726     750 ..     721     785 .. 0.75
   3 ?   -1.8   0.1       4.8   3.6e+03      85     107 ..     859     892 ..     823     938 .. 0.50

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 2.4e-06
      AAA_16  25 elvllsGesGvGKsslvrellralekdggiflr 57 
                 + vll+G++G+GK+ l+++++++l+ +   fl+
  EPX71307.1 679 GGVLLYGPPGTGKTLLAKAVATELSLS---FLS 708
                 68*******************999876...555 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.19
      AAA_16 123 lkrllallsrderplvlvlDdlqwad 148
                 +++++ ++++ + p ++++D+l+ + 
  EPX71307.1 726 MREIFTKAKN-AAPCIIFFDELDSVA 750
                 6778889999.889*********443 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 4.8
      AAA_16  85 lldeaesaeleawrekleeala...........a 107
                 l+++a s +l +  +++ee ++            
  EPX71307.1 859 LCADALSLALKRKTTEIEEIVKssrayvsvedfL 892
                 4444444455555555555544322222222220 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.0   7.7e-08   5.7e-05      36      95 ..     681     748 ..     672     802 .. 0.82

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 7.7e-08
      RuvB_N  36 vllyGpPGlGkttlakiiakelgvklkitsgPvl......ekagdlaalltnleekd..vlfideihr 95 
                 vllyGpPG Gkt lak +a+el  ++ +  gP l      e ++++  ++t+ ++    ++f de+  
  EPX71307.1 681 VLLYGPPGTGKTLLAKAVATELSLSFLSVKGPELlnmyvgESEANMREIFTKAKNAApcIIFFDELDS 748
                 9*******************************874434445566777777777665434777777765 PP

>> Vps4_C  Vps4 C terminal oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       9.4     7e+03      32      52 ..     603     623 ..     598     625 .. 0.78
   2 !   17.8   0.0   3.2e-06    0.0024      21      60 ..     897     936 ..     874     936 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 9.4
      Vps4_C  32 kDflkalkkarptVskeDLek 52 
                 ++ + +++ + p Vs+ D+ k
  EPX71307.1 603 NHTEYSIHCSGPVVSEHDIYK 623
                 5666788889999*****976 PP

  == domain 2  score: 17.8 bits;  conditional E-value: 3.2e-06
      Vps4_C  21 sdkllePpvtlkDflkalkkarptVskeDLekheeFTkef 60 
                 ++++l   ++ +Df+ al+k  p+Vs+++Le +++  ++f
  EPX71307.1 897 GQDILDLRIQHSDFELALQKLNPSVSESELEHYDRLKEQF 936
                 67899999************************98866665 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   2.8e-06    0.0021       1      91 [.     681     781 ..     681     787 .. 0.69

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 2.8e-06
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkkl...klkkkdsvysrnpeddfwdgYt....gqe.vvvidDfgqvkdee.nps.dlaelirlvsstpyplnma 87 
                   ++lyGp+g+GK++lak +a++l+ ++   k ++  ++y++++e ++ + +t      + ++ +d++ +v  +  + s   + + r+vs    +l+  
    EPX71307.1 681 VLLYGPPGTGKTLLAKAVATELSLSFlsvKGPELLNMYVGESEANMREIFTkaknAAPcIIFFDELDSVAPKRgDSSdSGNVMDRIVSQLLAELDSV 777
                   689********************77777788888899999888887776662212233134455666666666566656666777777666666555 PP

  RNA_helicase  88 slee 91 
                   + ++
    EPX71307.1 778 HKSD 781
                   5555 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0     2e-06    0.0015      52     101 ..     680     727 ..     669     735 .. 0.86

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 2e-06
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  52 avLlaGpsgtGktalaiaiskelgedvpfvalsgsevyslevkktevltq 101
                 +vLl Gp+gtGkt la a++ el+  + f +++g e+  + v  +e+ ++
  EPX71307.1 680 GVLLYGPPGTGKTLLAKAVATELS--LSFLSVKGPELLNMYVGESEANMR 727
                 79*********************9..99*********9999999998554 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   7.7e-06    0.0058       6      58 ..     679     731 ..     676     777 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 7.7e-06
      AAA_22   6 gilvvtGesGtGKTtllrrlleqldeeakaee...erpevvfvtlpsst.sskdllr 58 
                 g ++++G++GtGKT+l++ ++ +l   +       ++pe++ +++ +s+ + +++++
  EPX71307.1 679 GGVLLYGPPGTGKTLLAKAVATELSL-S---FlsvKGPELLNMYVGESEaNMREIFT 731
                 55799*****************9942.2...13346777776666665556666665 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   4.9e-06    0.0036       6      87 ..     681     759 ..     676     777 .. 0.74

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 4.9e-06
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTS...EEEEETGGG----...---- CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG...ivllDEidKihpk...essg 87 
                 +ll gp g+Gkt+laka+a  l++    ++  +   ell       +v + + +   +  ++++    i+++DE+d ++pk   +s +
  EPX71307.1 681 VLLYGPPGTGKTLLAKAVATELSL----SFLSVKGPELLN-----MYVGESEANMREIFTKAKNAapcIIFFDELDSVAPKrgdSSDS 759
                 7899*******************8....999999999999.....55555555555444444444499************75433333 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.1   1.1e-05    0.0086       1      34 [.     680     713 ..     680     799 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.1e-05
                 EEEEE--SSSSHHHHHHHGGGGBS--EEEEE--T CS
       AAA_5   1 dvlLvGppGtgKselaerlaaalnreveyvqltr 34 
                 +vlL GppGtgK+ la+ +a  l  +++ v +++
  EPX71307.1 680 GVLLYGPPGTGKTLLAKAVATELSLSFLSVKGPE 713
                 59*****************998887777776665 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   2.6e-05     0.019       2      43 ..     681     724 ..     681     774 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 2.6e-05
      AAA_33   2 vllvGlpGsGKstlaerllkklg..avllssdtlrrrlfgtdqq 43 
                 vll G+pG+GK+ la+ ++ +l   +  +  ++l+++++g+ + 
  EPX71307.1 681 VLLYGPPGTGKTLLAKAVATELSlsFLSVKGPELLNMYVGESEA 724
                 7899******************9877778888888888775443 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   3.9e-05     0.029      25      44 ..     681     700 ..     676     713 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 3.9e-05
  Mg_chelatase  25 lllvGppGsGKtmlakrlps 44 
                   +ll+GppG+GKt+lak++++
    EPX71307.1 681 VLLYGPPGTGKTLLAKAVAT 700
                   79**************9876 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   4.5e-05     0.033      46      71 ..     677     702 ..     670     726 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 4.5e-05
   IstB_IS21  46 kkenivllGpsGvGKshlaialgvea 71 
                  + +++l Gp+G+GK+ la a+++e 
  EPX71307.1 677 MRGGVLLYGPPGTGKTLLAKAVATEL 702
                 567899***************99875 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0    0.0001     0.076       5      76 ..     681     749 ..     678     797 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 0.0001
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelileklkeekktylflDEiqev 76 
                 +++ G+  +GKT l+k ++ el     s+l ++  +  +    ++e ++++i+ k+k+    ++f+DE   v
  EPX71307.1 681 VLLYGPPGTGKTLLAKAVATELS---LSFLSVKGPELLNMYVGESEANMREIFTKAKNAAPCIIFFDELDSV 749
                 6899*************998877...5555555554444444456667777777767778899*****9877 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   9.9e-05     0.074      21      59 ..     680     718 ..     655     728 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 9.9e-05
                 EEEEEESTTSSHHHHHHHHHHHTT--..----TTTTSEEEE CS
        TsaE  21 vilLeGdLGaGKTtlvrglakalgve..evkSPTFtlveeY 59 
                  +lL+G+ G+GKT l++++a +l ++  +vk P   l++ Y
  EPX71307.1 680 GVLLYGPPGTGKTLLAKAVATELSLSflSVKGP--ELLNMY 718
                 49*********************9988899988..455555 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   0.00014       0.1       1      25 [.     681     708 ..     681     782 .. 0.67

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 0.00014
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf...g 25 
                 +ll G+pG+GKt lak+++ +l +   +
  EPX71307.1 681 VLLYGPPGTGKTLLAKAVATELSLsflS 708
                 799***************9998443330 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.2   0.00026      0.19      28      56 ..     674     701 ..     653     711 .. 0.79
   2 ?   -0.9   0.0       1.4     1e+03     128     172 ..     724     770 ..     703     777 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00026
      AAA_25  28 gllpagelallaGapgtGKttlaldlala 56 
                 g+  + + +ll+G+pgtGKt la  +a +
  EPX71307.1 674 GV-NMRGGVLLYGPPGTGKTLLAKAVATE 701
                 55.5677789************9888765 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 1.4
      AAA_25 128 advdaleaaieevegvrlvviDplsralgg..densnsdv.galveal 172
                 a ++++  +++  + +  + +D l+++ +   d+ ++  v +++v++l
  EPX71307.1 724 ANMREIFTKAKN-AAPCIIFFDELDSVAPKrgDSSDSGNVmDRIVSQL 770
                 567788888888.5599999******9998777777777679999887 PP

>> Parvo_NS1  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0     9e-05     0.067     109     137 ..     673     701 ..     666     705 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 9e-05
   Parvo_NS1 109 kqlgkrntvwfyGpantGktnlaeaIaka 137
                 k    r+ v++yGp+ tGkt la+a a+ 
  EPX71307.1 673 KGVNMRGGVLLYGPPGTGKTLLAKAVATE 701
                 55667999*****************9975 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0         6   4.5e+03       7      39 ..     257     289 ..     254     299 .. 0.82
   2 ?   11.9   0.0   0.00021      0.15       2      37 ..     681     715 ..     680     761 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 6
       AAA_3   7 vPGlaktllvkalakaldlefkriqftpdllPs 39 
                 + G  kt+ + +l + + ++ kri++    lP 
  EPX71307.1 257 LFGENKTRCIPSLDSPVVVSAKRIRLKCIYLPF 289
                 568899******************998877775 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 0.00021
       AAA_3   2 vllegvPGlaktllvkalakaldlefkriqftpdll 37 
                 vll g PG++ktll+ka+a+ l+l+f  ++  p+ll
  EPX71307.1 681 VLLYGPPGTGKTLLAKAVATELSLSFLSVK-GPELL 715
                 7999*********************98876.45555 PP

>> YecM  YecM protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   0.00014      0.11      71     124 ..     266     321 ..     261     400 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00014
                 EEEEEEEEEETTEEE..EEEEEE---SS--SS-EEEEEEEE--S-GGGHHHHHHHT CS
        YecM  71 lfkLeqplqveeqki..dvvELPypkekkypqegwEHielVlpseaqeleeealal 124
                 + +L++p++v+ ++i  +++ LP+ ++ + ++  w+ +  V+++ ++ + + a al
  EPX71307.1 266 IPSLDSPVVVSAKRIrlKCIYLPFQSDGTLQHKVWDFVREVISQGTELCLNAAFAL 321
                 5579999999977763379************************9998776666554 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00015      0.11      10      37 ..     669     696 ..     646     703 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00015
      ATPase  10 eilkgGipegrvvlitGepGtGKtifal 37 
                 e++  G+ ++  vl++G pGtGKt++a+
  EPX71307.1 669 ELFGKGVNMRGGVLLYGPPGTGKTLLAK 696
                 455699999*****************97 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.1   0.00042      0.32      22      43 ..     681     702 ..     673     708 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00042
                 EEEE--TTSSTTHHHHHHHHHH CS
        PhoH  22 vfaiGpaGtGKtylavalavea 43 
                 v   Gp GtGKt+la a+a e+
  EPX71307.1 681 VLLYGPPGTGKTLLAKAVATEL 702
                 6789*************99875 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00027       0.2      30      58 ..     675     703 ..     669     749 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00027
       AAA_7  30 lknkkpvllvGptGtGKtviikdllkkld 58 
                 ++ +  vll+Gp GtGKt+++k + ++l+
  EPX71307.1 675 VNMRGGVLLYGPPGTGKTLLAKAVATELS 703
                 5667789***************9988887 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00037      0.28       5      22 ..     681     698 ..     678     717 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00037
      AAA_24   5 iliyGpsgiGKTtlakel 22 
                 +l+yGp+g+GKT lak  
  EPX71307.1 681 VLLYGPPGTGKTLLAKAV 698
                 79*************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (949 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       483  (0.0269396); expected 358.6 (0.02)
Passed bias filter:                      426  (0.0237604); expected 358.6 (0.02)
Passed Vit filter:                        78  (0.00435049); expected 17.9 (0.001)
Passed Fwd filter:                        24  (0.00133861); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              24  [number of targets reported over threshold]
# CPU time: 0.76u 0.34s 00:00:01.10 Elapsed: 00:00:00.50
# Mc/sec: 5684.66
//
Query:       EPX71308.1  [L=710]
Description: transcription factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.1e-17   62.5   3.7    3.1e-17   62.5   3.7    1.8  2  Fungal_trans  Fungal specific transcription factor domain


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.1      0.15   2.6e+03     188     225 ..     139     168 ..     126     221 .. 0.59
   2 !   62.5   3.7   1.7e-21   3.1e-17       1     196 [.     314     492 ..     314     549 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 0.15
  Fungal_trans 188 ddddlwesddaseetlvetklsneeksrkiasfllaLk 225
                   + + + ++++a++++++        ks++++++  +L+
    EPX71308.1 139 NTSAQASALNADFFEKP--------KSSSKPYYSPSLS 168
                   44433444444444443........3555555554444 PP

  == domain 2  score: 62.5 bits;  conditional E-value: 1.7e-21
  Fungal_trans   1 ldrffsnfhpqfpilhkpsflpktssenssksayaspllllailalGalfsesetkesnssltsesqefiafplraeilihedfsspssslwilqsL 97 
                   ++++f ++hp +p++h++ fl  +    ++ + + sp+ll a++a   l+++ +++  n+++ +++  +      ++++  e+++ ++s l  l +L
    EPX71308.1 314 INLYFRYIHPTYPVVHRERFLLLF----NTAKHKISPILLMAMYAASILYWDADESLRNFPRVDSK--K-----LWDMTE-ESLNQSFS-LPRLSTL 397
                   689*********************....9999***********************99988888865..3.....488888.77777777.8888888 PP

  Fungal_trans  98 lllelyektss..dralherhhgvavrlarslgLhrnpsyvgkkslwklweeeaesrrRlwwaaFylDktialklGrppllddsqinlpLPcddddl 192
                     + +++ ++   + a+ + ++  av la  lg+h + s+++       +eee+  r R+wwa F+ +k+++++ G ++ ++ ++  +p   + + l
    EPX71308.1 398 QAAVIFLAGRPwiNVAGNWSILTRAVALALILGFHLDCSDWQ------IPEEEKVLRIRTWWALFISEKWLSMYIGINTSIRQDDYLVPPLSNTQML 488
                   888888888887799*************************99......*******************************989999999944444413 PP

  Fungal_trans 193 wesd 196
                    + +
    EPX71308.1 489 PSEN 492
                   3333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (710 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       554  (0.0308997); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.29s 00:00:00.89 Elapsed: 00:00:00.48
# Mc/sec: 4434.40
//
Query:       EPX71309.1  [L=169]
Description: hypothetical protein SOCG_01528 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-08   33.9   1.5     0.0004   20.9   0.1    3.0  3  Ank_4     Ankyrin repeats (many copies)
    8.1e-07   29.2   0.4      0.018   15.5   0.0    2.6  3  Ank       Ankyrin repeat
      1e-06   29.3   0.1    2.2e-06   28.1   0.1    1.6  1  Ank_2     Ankyrin repeats (3 copies)
    1.2e-05   25.3   1.3      0.059   13.9   0.2    3.3  3  Ank_3     Ankyrin repeat
    0.00011   22.4   0.5       0.15   12.4   0.1    3.4  3  Ank_5     Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.1   1.6e-06    0.0059       6      55 .]      10      67 ..       5      67 .. 0.83
   2 !   20.9   0.1   1.1e-07    0.0004       2      55 .]      48     108 ..      47     108 .. 0.84
   3 !    6.2   0.0    0.0046        17      14      41 ..     101     127 ..      98     128 .. 0.92

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 1.6e-06
       Ank_4  6 hyaaisgrlelvrlLle..kgad......inaqdnrsGetalhiAakrgnveilklLl 55
                  +++++r+++v+ L e  +g++      in   ++ G+ +lh +ak g+v++l + l
  EPX71309.1 10 ETLVAACRTDNVDMLAEvvHGQEghevefINQARDSLGNDCLHVCAKYGSVNCLDWIL 67
                5677899999999999888999977777877776778*****************9975 PP

  == domain 2  score: 20.9 bits;  conditional E-value: 1.1e-07
       Ank_4   2 ltaLhyaaisgrlelvrlLle.kgadinaqdnrsGetalhiAa....krgn....veilklLl 55 
                 +++Lh +a++g + +++++l+ +g+++n+ +   G+t+lh  +    +  n    ++++++L+
  EPX71309.1  48 NDCLHVCAKYGSVNCLDWILDiSGIELNHHSRMTGDTPLHVSVgylkR--NeeisLQMVEMLI 108
                 789*****************868******85566*********88633..2445599999997 PP

  == domain 3  score: 6.2 bits;  conditional E-value: 0.0046
       Ank_4  14 lelvrlLlekgadinaqdnrsGetalhi 41 
                 l++v+ L+e gad  a+ n++G+ +++i
  EPX71309.1 101 LQMVEMLIEVGADSLAT-NNDGFRPIDI 127
                 79***********9999.*******987 PP

>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       3.4   1.2e+04       9      19 ..      15      25 ..      13      31 .. 0.59
   2 !   11.3   0.1    0.0001      0.37       2      30 ..      47      77 ..      46      79 .. 0.90
   3 !   15.5   0.0   4.9e-06     0.018       2      32 .]      82     119 ..      81     119 .. 0.78

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 3.4
                HHHHTTHHHHH CS
         Ank  9 Aatngkkriik 19
                A++ ++++++ 
  EPX71309.1 15 ACRTDNVDMLA 25
                66777755544 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 0.0001
                SBBHHHHHHHHTTHHHHHHHH..TTTSTTCB CS
         Ank  2 GnTPLHlAatngkkriiklLL..hGAnlnal 30
                Gn +LH++a +g+++++ ++L  +G +ln +
  EPX71309.1 47 GNDCLHVCAKYGSVNCLDWILdiSGIELNHH 77
                8889***9************98779999988 PP

  == domain 3  score: 15.5 bits;  conditional E-value: 4.9e-06
                 SBBHHHHHH...HHTT.....HHHHHHHH.TTTSTTCBTT CS
         Ank   2 GnTPLHlAa...tngk.....kriiklLL.hGAnlnaldn 32 
                 G+TPLH+ +            ++++++L+  GA+  a++n
  EPX71309.1  82 GDTPLHVSVgylK--RneeisLQMVEMLIeVGADSLATNN 119
                 9******778652..24579999******55**9888776 PP

>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.1   0.1   6.2e-10   2.2e-06       4      79 ..      15     114 ..      12     119 .. 0.72

  Alignments for each domain:
  == domain 1  score: 28.1 bits;  conditional E-value: 6.2e-10
       Ank_2   4 AakngnlelvklLl...egadpn...k....ngktaLhyAakngnleivklLle.......h.adndgrtpLhyAars...g...hleivklLlekgad 78 
                 A++ +n +++   +   eg++++   +     g+  Lh++ak+g+++++ ++l+       h  + +g tpLh+++ +   +   +l++v++L+e gad
  EPX71309.1  15 ACRTDNVDMLAEVVhgqEGHEVEfinQardsLGNDCLHVCAKYGSVNCLDWILDisgielnHhSRMTGDTPLHVSVGYlkrNeeiSLQMVEMLIEVGAD 113
                 566565666666665666666655542455799********************96555443255588*********8876425666999*****99998 PP

       Ank_2  79 i 79 
                  
  EPX71309.1 114 S 114
                 5 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0         1   3.7e+03       8      18 ..      14      24 ..      12      30 .. 0.73
   2 !   13.9   0.2   1.7e-05     0.059       2      31 .]      47      76 ..      46      76 .. 0.94
   3 !    8.3   0.0    0.0011       4.1       2      28 ..      82     113 ..      81     116 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 1
       Ank_3  8 lAarsgnleiv 18
                 A+r +n++++
  EPX71309.1 14 AACRTDNVDML 24
                58999988865 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 1.7e-05
       Ank_3  2 GetpLhlAarsgnleivkfLlenkgadvna 31
                G+  Lh++a++g+++ ++++l++ g+++n+
  EPX71309.1 47 GNDCLHVCAKYGSVNCLDWILDISGIELNH 76
                7889**********************9996 PP

  == domain 3  score: 8.3 bits;  conditional E-value: 0.0011
       Ank_3   2 GetpLhlAarsgnl......eivkfLlenkgad 28 
                 G tpLh+ + + +        +v++L+e  gad
  EPX71309.1  82 GDTPLHVSVGYLKRneeislQMVEMLIE-VGAD 113
                 8899998888888866543337******.7998 PP

>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.83     3e+03      20      33 ..      12      25 ..       9      33 .. 0.75
   2 !   12.4   0.1   4.1e-05      0.15      11      54 ..      42      87 ..      37      89 .. 0.79
   3 !    6.2   0.0    0.0037        13      28      55 ..     100     127 ..      74     128 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.83
       Ank_5 20 LhvAakygaadvvr 33
                L  A++  + d++ 
  EPX71309.1 12 LVAACRTDNVDMLA 25
                77789988888875 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 4.1e-05
       Ank_5 11 rldgggntpLhvAakygaadvvrlLl.argadlnltdsrG.ltald 54
                ++d  gn +Lhv akyg+ +++ ++l   g  ln    +  +t+l+
  EPX71309.1 42 ARDSLGNDCLHVCAKYGSVNCLDWILdISGIELNHHSRMTgDTPLH 87
                678899********************76666666666666666665 PP

  == domain 3  score: 6.2 bits;  conditional E-value: 0.0037
       Ank_5  28 aadvvrlLlargadlnltdsrGltaldl 55 
                 ++++v++L++ gad  +t+++G  ++d+
  EPX71309.1 100 SLQMVEMLIEVGADSLATNNDGFRPIDI 127
                 6899******9***999*9999988887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       301  (0.0167884); expected 358.6 (0.02)
Passed bias filter:                      269  (0.0150036); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.45
# Mc/sec: 1127.66
//
Query:       EPX71310.1  [L=880]
Description: potassium ion/proton antiporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.4e-52  176.4  41.1    9.9e-52  176.0  41.1    1.1  1  Na_H_Exchanger  Sodium/hydrogen exchanger family
  ------ inclusion threshold ------
      0.052   13.5   0.3       0.18   11.8   0.3    1.9  1  LRR19-TM        Leucine-rich repeat family 19 TM domain


Domain annotation for each model (and alignments):
>> Na_H_Exchanger  Sodium/hydrogen exchanger family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  176.0  41.1   1.1e-55   9.9e-52       3     379 ..      31     417 ..      22     419 .. 0.89

  Alignments for each domain:
  == domain 1  score: 176.0 bits;  conditional E-value: 1.1e-55
                     HHHHHHHHHHH.....H.HHHTTSXHHHHHHHHHHHHTTTTTS.................HHHCHCCHHHHCHHCCHHHHCTCGCCTGCCTHHHH CS
  Na_H_Exchanger   3 llillallvgl.....l.arrlklpeivgliiaGlllGpsglg....lieps........eedlevlselglilllFlaGleldlrelrknlksi 79 
                     +++       l     + ++ l +p +++++i G+llGp  +g    +               l+++s+lgl+l lF +G+e+d++ + +n k +
      EPX71310.1  31 IIG-------LsrllhFpLSILQQPRVIAEVIGGILLGPTAFGripgF---LshifpdesLGPLNLVSNLGLVLYLFVIGMEVDMNVFISNYKVT 115
                     222.......2232433478999********************66662...04446655556689****************************** PP

                     HHHHHHHHHHHHHHHHHHHH.H...HTXTTCHHHHH.HHHHHHTSSXHHHHHHHC.CCCTSTCCCCCCHHHHHHHHHHHCCCCCHHHHHHTXXXX CS
  Na_H_Exchanger  80 lllallgvlitvvliGlllyll...lilgiplleal.lfgailsatdpvvvlailkeegrvperlgtlllgesvlnDavavvllavllalakeea 170
                     +l+ l ++l+++++ G +++++   + ++ ++ e l ++g+++s+t ++v+++il+e++++ +rlg ++l+++v nD+v+++lla+ ++l+  + 
      EPX71310.1 116 TLVTLSSILFPFAA-GSAISVGlhqFTPNSNFGEFLlFIGTAMSITAFPVLARILSELHLLHRRLGVIVLAAGVGNDVVGWLLLALSITLV-NSG 208
                     **************.9988877888889*****986267****************************************************.667 PP

                     XTSSSTSXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTHHHHHHHHHHHHHHHHHHHHHTSXXXHHHHHHHHHHHHH.HHHHHTTHHHHHHHH CS
  Na_H_Exchanger 171 ggetslllllliflvvavgglllglvigwllrlitrftdddrelevllvlllallaallaellgvsgilgaflaGlvls.eyefsnklseklesf 264
                     +g+ +++ lll+  + a++++l++ ++ +l+ ++++  +d +e+++++ l+++l++a++++++gv+ i+g fl G +++ e ++  k++ek+e +
      EPX71310.1 209 TGVQAIYVLLLVCGWCAFLFVLVKPLLRYLAMKTEALEKDPSEFFICILLCFVLISAFFTDIIGVHPIFGGFLIGTIIPhENNLTVKITEKIEDL 303
                     7777777888888888888888888888888888887699999************************************99999999******** PP

                     HHHHHHHHHHHHHHHHSXHHHHHXXHHHHHHHHHHHHHHHTHHHHHHHHHTTTXSSXHHHHHHCCCCSS.BHHHHHHHHHHHHHHXHHHHTTSST CS
  Na_H_Exchanger 265 reglfnplfFvlvGlsldlkvlnnhlsvlilvllilvaillgrilavflllrllglslrealiigfgglqrgavalalaalgpalgllarelyal 359
                        l++pl+F+++Gl+++++ ln + + +++ ++++ + + ++i +   ++r l++s++e+++ig +++++g v l+++++g ++g+l+++ +++
      EPX71310.1 304 VVCLLLPLYFASSGLKTNIATLN-DGKSWAYTIGVISVAISSKIFSSTMAARCLKISWSESWAIGSLMSCKGLVELIVLNIGLSSGILDEKIFTM 397
                     **********************5.9999999999999999******************************************************* PP

                     TTCSTSXHHHHHHHHHHHHH CS
  Na_H_Exchanger 360 livvvlftvlvqGlslkpll 379
                     ++v++++t++v + ++++ l
      EPX71310.1 398 FVVMAVVTTFVTTPMTRFCL 417
                     **********8888877665 PP

>> LRR19-TM  Leucine-rich repeat family 19 TM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.3     2e-05      0.18       6      38 ..     322     355 ..     318     363 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2e-05
    LRR19-TM   6 aekeksgksWaylvgvvvlalvtslli.llaikc 38 
                  ++ + gksWay++gv+ +a+   ++  ++a++c
  EPX71310.1 322 IATLNDGKSWAYTIGVISVAISSKIFSsTMAARC 355
                 556678**************98777642456677 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (880 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       618  (0.0344693); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.28s 00:00:00.93 Elapsed: 00:00:00.44
# Mc/sec: 6005.79
//
Query:       EPX71311.1  [L=339]
Description: CAMK/CAMK1 protein kinase Cmk1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      8e-73  245.0   0.0    9.4e-73  244.8   0.0    1.1  1  Pkinase         Protein kinase domain
    4.8e-34  117.8   0.0    6.2e-34  117.4   0.0    1.1  1  Pkinase_Tyr     Protein tyrosine kinase
    1.5e-07   31.0   0.0    2.1e-07   30.6   0.0    1.3  1  Kinase-like     Kinase-like
    0.00046   19.1   0.0    0.00088   18.2   0.0    1.4  1  Pkinase_fungal  Fungal protein kinase
     0.0017   17.8   0.0     0.0025   17.2   0.0    1.4  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
     0.0079   16.2   0.0      0.081   12.8   0.0    2.0  2  APH             Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.099   12.2   0.0       0.21   11.1   0.0    1.5  1  YrbL-PhoP_reg   PhoP regulatory network protein YrbL


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  244.8   0.0   3.7e-76   9.4e-73       1     264 []      33     293 ..      33     293 .. 0.93

  Alignments for each domain:
  == domain 1  score: 244.8 bits;  conditional E-value: 3.7e-76
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS..CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--H CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklk..hpnivrlyevfeekdelylvleyveggeladllerkgslse 97 
                 y++ + lG Gs+++V +av+ et++ +A K+i+k+  +kk  + v +Ei+ilk+++  hpni+rl+++fe+ ++lyl++e++ ggel+d++  +gs+ e
  EPX71311.1  33 YRTGRVLGGGSYSVVKEAVHIETKELYAAKIINKKLVEKKP-EFVKNEITILKRISsgHPNILRLVDYFETVNNLYLITELATGGELFDRICSQGSFYE 130
                 678899*****************************998855.69************9****************************************** PP

                 HHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEE.TTTE..EEE-SGTTSEESSSSCS..BCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHH CS
     Pkinase  98 eeakkiakqilegleylHskgiiHrDlKpeNiLid.ekge..lKitDFGlakelesssk..ltsfvgtseYlAPEvlkeneyskkvDvWslGvilyell 191
                 ++a ++++++ ++++ylH++gi+HrDlKpeN+L+  ++ +  l i+DFGl++ ++ s+   l++ +gt+eY+APE+ ++ +y+k+vD+Ws+Gvi y ll
  EPX71311.1 131 ADAARLIRTTTSAVKYLHENGIVHRDLKPENLLYRsKDPNseLLIADFGLSQFYDDSQYymLMTACGTPEYMAPEIFRRVGYGKSVDIWSIGVIAYFLL 229
                 **********************************95444477**************9989999************************************ PP

                 HSS-STTTSSHHHHHHHHHHTHHHHHHHCT.SHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 192 tgkppfsgekgkekvekeldqlekilkilg.etkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 +g  pf  +++          +e i  il  +++++ + +s +s++akd++ k+l+ dp kRlta+e+l+hp+l
  EPX71311.1 230 CGYSPFVRSSQ----------VEVIEAILAnQYEFHEAYWSGVSSTAKDFICKCLEDDPAKRLTATEALHHPFL 293
                 *******3333..........3344445544889999***********************************97 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.4   0.0   2.4e-37   6.2e-34       3     254 ..      35     286 ..      33     290 .. 0.91

  Alignments for each domain:
  == domain 1  score: 117.4 bits;  conditional E-value: 2.4e-37
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS..-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkkl..khpnivkllgvctkeepllivteyvkgGdLlkfLrkkeke 98 
                  +g+ lG G+++ V e+       ++++  a K+++++  e++ e + +e++i+k++   hpni++l+      ++l+++te+++gG+L + + ++   
   EPX71311.1  35 TGRVLGGGSYSVVKEAVHI----ETKELYAAKIINKKLVEKKPEFVKNEITILKRIssGHPNILRLVDYFETVNNLYLITELATGGELFDRICSQ--G 126
                  6799************999....7788889999999999997777778********877*********************************998..9 PP

                  TSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE...TTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHH CS
  Pkinase_Tyr  99 kltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse...nkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfGv 193
                  ++   d  +++    ++++yL+++ +vHrdl   N L ++   n+   i+DfGL++   +d++y++  +a    ++mapE++++  + ++ D+Ws Gv
   EPX71311.1 127 SFYEADAARLIRTTTSAVKYLHENGIVHRDLKPENLLYRSkdpNSELLIADFGLSQFY-DDSQYYMLMTACGTPEYMAPEIFRRVGYGKSVDIWSIGV 223
                  999***********************************99777789*********987.888888888888888************************ PP

                  HHHHHHTTSSGTTTTSHHHHHHHHH.HTTEES-BB..TTSBHHHHHHHHHHT-SSGGGS--HHH CS
  Pkinase_Tyr 194 llwEiftlgespypglkneevlekl.kegkrlekp..ekcpeelyelmkkcweedpeeRptfse 254
                  + + +++ g sp+ + ++ ev+e++  ++++ ++   + ++++ ++++ kc+e dp++R t +e
   EPX71311.1 224 IAYFLLC-GYSPFVRSSQVEVIEAIlANQYEFHEAywSGVSSTAKDFICKCLEDDPAKRLTATE 286
                  ***9999.***************99777777655422678999****************98766 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.6   0.0     8e-11   2.1e-07     136     253 ..     124     238 ..      49     255 .. 0.80

  Alignments for each domain:
  == domain 1  score: 30.6 bits;  conditional E-value: 8e-11
  Kinase-like 136 et.hkkletiarlllTlqlirlaanLqakglvhgkftvdnlll...dekgglmlggf..taLvragtkvvlsevekgfaPpEllgsrggytrknktkm 227
                  ++  + ++++arl+ T      + +L+++g+vh +++++nll+   d++  l + +f  ++ + + +++ l     +   pE ++        +++ +
   EPX71311.1 124 SQgSFYEADAARLIRTT--TSAVKYLHENGIVHRDLKPENLLYrskDPNSELLIADFglSQFYDDSQYYML---MTACGTPEYMAPEIF----RRVGY 212
                  44467889999999998..899*********************55556788***99933467777777774...445555777777444....56788 PP

  Kinase-like 228 thkldaWqlGlviyriwclklPltla 253
                    ++d W +G+ +y++ c + P+   
   EPX71311.1 213 GKSVDIWSIGVIAYFLLCGYSPFVRS 238
                  88********************9765 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   3.4e-07   0.00088     318     387 ..     143     208 ..     133     220 .. 0.88

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 3.4e-07
  Pkinase_fungal 318 ghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlk 387
                     + + L+ + gi+HrD   +N+l     k+++ + l++D+ l   ++d s+     +  GT+e+ma e+ +
      EPX71311.1 143 AVKYLH-ENGIVHRDLKPENLLYR--SKDPNSELLIADFGLSQFYDD-SQYYMLMTACGTPEYMAPEIFR 208
                     567799.9**************99..788899999***********7.7777789**********99887 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   9.7e-07    0.0025      94     167 ..     108     179 ..      41     185 .. 0.84

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 9.7e-07
         Kdo  94 llterlegaqdLedllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDld 167
                 l+te  +g +  + ++ +  ++ e+  ++l++ +  +++ lh+ g+ H+dl + n+l + ++  + e+ + D+ 
  EPX71311.1 108 LITELATGGELFDRICSQ-GSFYEADAARLIRTTTSAVKYLHENGIVHRDLKPENLLYRSKD-PNSELLIADFG 179
                 556655555556666665.44667778899999***************************97.99999999985 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.13   3.4e+02      14      76 ..      51     115 ..      35     125 .. 0.78
   2 !   12.8   0.0   3.2e-05     0.081     152     194 ..     136     179 ..     118     185 .. 0.70

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.13
                 EEEEETT--EEEEEE-TT...S-HHHHHHHHHHHHHHHHTT-B--B-CTTBS-EEETTEEEEEEE- CS
         APH  14 ylvttpagryvlrrnppa...raaeeirrevallrlLakagvpvPevlagdtddeeigllfaliey 76 
                 ++++t+   y+ ++++++   + +e++ +e  +l+ ++   + + +++++ +  + ++l  +l ++
  EPX71311.1  51 VHIETK-ELYAAKIINKKlveKKPEFVKNEITILKRISSGHPNILRLVDYFETVNNLYLITELATG 115
                 555554.4899999999988899999999999****999999999999998777777776666665 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 3.2e-05
                 HHHHHHHH--SSS-EEEE-SS-SGGGEEEC.....TTEEEEE---T CS
         APH 152 vlaalaallpgelptvllHgDlhpgNllvd...pddgrvtGviDfe 194
                 ++++    +    + +++H+Dl+p Nll +   p+   +  + Df+
  EPX71311.1 136 LIRTTTSAVKYLHENGIVHRDLKPENLLYRskdPNSELL--IADFG 179
                 455555555558899**************9754444444..55665 PP

>> YrbL-PhoP_reg  PhoP regulatory network protein YrbL
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   8.2e-05      0.21     129     169 ..     141     179 ..     116     195 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 8.2e-05
  YrbL-PhoP_reg 129 defleelldnhivtndlsakNivvkknsegeeelvlvDGlG 169
                       +++l +n iv +dl+++N++++ ++ +  el + D +G
     EPX71311.1 141 TSAVKYLHENGIVHRDLKPENLLYRSKDPNS-ELLIAD-FG 179
                    45689*******************9998887.666655.55 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (339 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       592  (0.0330191); expected 358.6 (0.02)
Passed bias filter:                      529  (0.0295053); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.45
# Mc/sec: 2282.29
//
Query:       EPX71312.1  [L=661]
Description: CCR4-Not complex subunit Caf4/Mdv1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      2e-32  110.7   9.0    3.8e-06   27.5   0.1    6.7  6  WD40          WD domain, G-beta repeat
    2.6e-10   39.6   3.8      0.015   14.0   0.4    4.7  5  Nup160        Nucleoporin Nup120/160
      4e-06   27.0   0.0         11    6.4   0.0    5.6  6  ANAPC4_WD40   Anaphase-promoting complex subunit 4 WD40 domai
     0.0076   16.8   6.0      0.019   15.5   6.0    1.6  1  APG6_N        Apg6 coiled-coil region
  ------ inclusion threshold ------
      0.026   13.6   1.1       0.33   10.0   0.0    2.2  2  hDGE_amylase  Glycogen debranching enzyme, glucanotransferase
      0.035   14.2   0.1      0.067   13.3   0.1    1.4  1  CIMR          Cation-independent mannose-6-phosphate receptor
       0.16   12.4   0.2       0.36   11.3   0.2    1.5  1  YGGT          YGGT family
       0.42   11.3   3.4         36    5.1   3.4    2.6  1  Plk4_PB2      Polo-like Kinase 4 Polo Box 2


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.5   0.1   1.7e-09   3.8e-06       1      38 []     322     360 ..     322     360 .. 0.87
   2 !   24.1   0.0     2e-08   4.6e-05       3      38 .]     366     400 ..     364     400 .. 0.86
   3 !   20.8   0.1   2.3e-07   0.00051       5      38 .]     435     468 ..     432     468 .. 0.89
   4 !   10.5   0.1    0.0004      0.91      25      38 .]     518     531 ..     497     531 .. 0.79
   5 !   26.2   0.0   4.5e-09     1e-05       3      38 .]     537     571 ..     535     571 .. 0.90
   6 ?    0.8   0.0      0.47   1.1e+03      25      38 .]     597     610 ..     586     610 .. 0.81

  Alignments for each domain:
  == domain 1  score: 27.5 bits;  conditional E-value: 1.7e-09
                 TEEEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 
                 g++++ + +H s++tsl+  +p g+++ ++s D+tv++Wd
  EPX71312.1 322 GTPVKQFQAHsSPITSLDfSHPFGNLV-TASLDKTVKVWD 360
                 578999****888*****888888887.6788*******9 PP

  == domain 2  score: 24.1 bits;  conditional E-value: 2e-08
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 cl+ l+GH + v++l      +++asGs+D +vr+W+
  EPX71312.1 366 CLGQLEGHeDYVSCL--AMQDSFIASGSMDSSVRLWN 400
                 9999****777****..445566*************8 PP

  == domain 3  score: 20.8 bits;  conditional E-value: 2.3e-07
                 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++l+ H ++vt+l  s+d  +l sG  D+tvr Wd
  EPX71312.1 435 TVLSSHtGPVTALTLSSDDVLL-SGANDKTVRQWD 468
                 67999*888****999999998.7*99*******9 PP

  == domain 4  score: 10.5 bits;  conditional E-value: 0.0004
                 EEEEETTSEEEEEE CS
        WD40  25 lasGsdDgtvriWd 38 
                 +asG+ Dg +riWd
  EPX71312.1 518 VASGTVDGLIRIWD 531
                 689*9********9 PP

  == domain 5  score: 26.2 bits;  conditional E-value: 4.5e-09
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++r++ GH  +v+ l  + d+++l sGs+D++vriWd
  EPX71312.1 537 PVRSFFGHtAPVSTL--QFDSNYLYSGSYDNSVRIWD 571
                 789999**888****..77899999***********9 PP

  == domain 6  score: 0.8 bits;  conditional E-value: 0.47
                 EEEEETTSEEEEEE CS
        WD40  25 lasGsdDgtvriWd 38 
                 la +s+D++ ri+d
  EPX71312.1 597 LAVASEDPSMRIFD 610
                 466899******98 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.2   0.0    0.0063        14     233     253 ..     347     367 ..     329     371 .. 0.88
   2 !   14.0   0.4   6.5e-06     0.015     223     282 ..     377     437 ..     374     453 .. 0.75
   3 !    7.8   0.2   0.00049       1.1     229     277 ..     451     498 ..     441     506 .. 0.73
   4 ?   -2.3   0.0      0.56   1.3e+03     233     254 ..     518     539 ..     513     545 .. 0.79
   5 !   10.7   0.0   6.7e-05      0.15     228     259 ..     551     584 ..     543     608 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.0063
                 EEEEETT-EEEEEETTTTEEE CS
      Nup160 233 lfalsrdgkLrvWnlltgkcl 253
                 l+++s+d++++vW+ +   cl
  EPX71312.1 347 LVTASLDKTVKVWDMAGVVCL 367
                 789***********9987776 PP

  == domain 2  score: 14.0 bits;  conditional E-value: 6.5e-06
                 T.....TTTEEEEEETT-EEEEEETTTTEEEEE.EE--.-SSSTTS--SSEESEEESSSSE CS
      Nup160 223 vavveigqtylfalsrdgkLrvWnlltgkclat.idllrdeeaqdessskstldpaessli 282
                 v++  ++++++++ s d  +r+Wnl++g +  t +d + +e + +++s + +  +  ++ +
  EPX71312.1 377 VSCLAMQDSFIASGSMDSSVRLWNLENGILQNTeKDSSSNELDGNDESPQNHTTDNATTVL 437
                 6788789**************************9999967777777777744333333333 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.00049
                 TTTEEEEEETT-EEEEEETTTTEEEEEEE--.-SSSTTS--SSEESEEE CS
      Nup160 229 gqtylfalsrdgkLrvWnlltgkclatidllrdeeaqdessskstldpa 277
                  +++l++   d+++r W++ tg+c+ t d    + +qd s + ++l+++
  EPX71312.1 451 SDDVLLSGANDKTVRQWDIVTGRCIQTLDFV-WADTQDPSPKLTPLNDS 498
                 5677888889*****************9987.34444444444455555 PP

  == domain 4  score: -2.3 bits;  conditional E-value: 0.56
                 EEEEETT-EEEEEETTTTEEEE CS
      Nup160 233 lfalsrdgkLrvWnlltgkcla 254
                 +++ ++dg +r+W+l+ g +++
  EPX71312.1 518 VASGTVDGLIRIWDLRVGLPVR 539
                 566689********98766665 PP

  == domain 5  score: 10.7 bits;  conditional E-value: 6.7e-05
                 ...TTTEEEEEETT-EEEEEETTTTEEEEEEE-- CS
      Nup160 228 i..gqtylfalsrdgkLrvWnlltgkclatidll 259
                    +++yl++ s d+ +r+W+l++g++l  i + 
  EPX71312.1 551 LqfDSNYLYSGSYDNSVRIWDLRSGSPLDIIPME 584
                 2459**********************99998877 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0      0.11   2.5e+02      35      89 ..     329     382 ..     313     385 .. 0.79
   2 ?    3.4   0.0     0.042        94      34      72 ..     370     406 ..     351     418 .. 0.73
   3 ?    3.6   0.0     0.036        80      37      77 ..     440     479 ..     431     486 .. 0.83
   4 ?    0.3   0.0       0.4   8.9e+02      53      91 ..     518     555 ..     514     556 .. 0.83
   5 ?    4.7   0.0     0.017        38      45      87 ..     552     590 ..     528     595 .. 0.82
   6 !    6.4   0.0    0.0047        11      10      67 ..     597     661 .]     594     661 .] 0.88

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.11
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                  ++++s ++sL +++    L+ a  d +v++ d+    ++ +l+ +++  v+cl  
   EPX71312.1 329 QAHSSPITSLDFSHPFGNLVTASLDKTVKVWDMAGVVCLGQLEGHED-YVSCLAM 382
                  56788899999988888888899999999999999999999988888.5888875 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.042
  ANAPC4_WD40  34 edkedsevrsLaWkpdgklLavaysdgevrlldaesgkv 72 
                   ++++  v++La  ++++++a +  d++vrl + e+g +
   EPX71312.1 370 LEGHEDYVSCLA--MQDSFIASGSMDSSVRLWNLENGIL 406
                  455666666666..5689*****************9955 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.036
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhsls 77 
                  + + v++L  + d+ +L  + +d +vr  d+ +g+++++l+
   EPX71312.1 440 HTGPVTALTLSSDD-VLLSGANDKTVRQWDIVTGRCIQTLD 479
                  56778888888765.777899***************99876 PP

  == domain 4  score: 0.3 bits;  conditional E-value: 0.4
  ANAPC4_WD40  53 LavaysdgevrlldaesgkvvhslsvksekavtclgWge 91 
                   a ++ dg +r+ d   g  v+s+  ++   v++l++ +
   EPX71312.1 518 VASGTVDGLIRIWDLRVGLPVRSFFGHTA-PVSTLQFDS 555
                  689999************99999977766.588888865 PP

  == domain 5  score: 4.7 bits;  conditional E-value: 0.017
  ANAPC4_WD40  45 aWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtcl 87 
                  +   d + L  +  d++vr+ d  sg  +  +++++   v++l
   EPX71312.1 552 Q--FDSNYLYSGSYDNSVRIWDLRSGSPLDIIPMEKR--VSSL 590
                  4..467899******************9999999877..6665 PP

  == domain 6  score: 6.4 bits;  conditional E-value: 0.0047
  ANAPC4_WD40  10 iAlatedgellvfRlngqrvwtl.......eedkedsevrsLaWkpdgklLavaysdgevrllda 67 
                  +A+a+ed ++++f +n +r w          +++  +ev+    +  +++L+ +  dg+v++++a
   EPX71312.1 597 LAVASEDPSMRIFDVNSHRTWICsdypqnvLNNSVLGEVTPTYLQYRDRFLVDGKTDGSVSIFSA 661
                  79999999999999999999999999887767777889999999999999999999999999885 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   6.0   8.5e-06     0.019      44      98 ..     168     243 ..     130     250 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 8.5e-06
      APG6_N  44 k.....................qdeeleeleeeleklekeeeelleeLkelekereeleaelaaleeelealeeee 98 
                 +                     + +el +++ el+kl++ +++ l++L+ +e++  e +a+l +le++  +++ +e
  EPX71312.1 168 TptsqhrflvdyckklhvrrnvHTSELTQIDAELSKLHSRRRQILNKLNHAEDKCLEFDAQLTSLEKTILEVDSKE 243
                 0455555555556666666666899*******************************************99999887 PP

>> hDGE_amylase  Glycogen debranching enzyme, glucanotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.8     0.054   1.2e+02     204     287 ..     139     225 ..     112     272 .. 0.60
   2 ?   10.0   0.0   0.00015      0.33      92     137 ..     474     519 ..     461     526 .. 0.90

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.054
                   ---..-TT..SHHHHHHHHHHHS.-SSTTS--STT---B-HHHHHHHHHHHT.-SS.TTT....THHHHHHHHHHHHHHHHHHHHHH CS
  hDGE_amylase 204 elkeelkea.slkeeaklvkeka.lkeakkllerfsakidlevaaallkall.eeekkeeeeeeevaeklkkildelNlelykelde 287
                   ++k++ +++ +lk+  +  ++++  ++ ++ +++ +  +d  + +++ ++++ +e ++ ++e ++ +++ ++il++lN    k l+ 
    EPX71312.1 139 KAKKQEEATfDLKQLSQSSNRNQaATDDTTPTSQHRFLVDYCKKLHVRRNVHtSELTQIDAELSKLHSRRRQILNKLNHAEDKCLEF 225
                   222222222355555554444332333333344444445555555554444423334445567788899999999999876654444 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00015
                   -EEEEEE--SEEETT-CCCCC-GGGS--TTT-GGGHHHHHHHCCCC CS
  hDGE_amylase  92 llsltDvVlnHtannskwleehPeagYnletaPhLepAleLdkall 137
                   ++ + D V+  t + s+ l+   +++Y++++ P++++   Ld+a++
    EPX71312.1 474 CIQTLDFVWADTQDPSPKLTPLNDSAYSIANEPFIRALDCLDAAVA 519
                   56789********************************999999875 PP

>> CIMR  Cation-independent mannose-6-phosphate receptor repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.1     3e-05     0.067      52      98 ..     139     186 ..     118     203 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 3e-05
        CIMR  52 qvtdaagkeyDLsaLsrkse.nweavdtsasgkkkhfyinvCkpeaki 98 
                 +++ ++  ++DL +Ls++s+ n  a d+++ + +++f+++ Ck+    
  EPX71312.1 139 KAKKQEEATFDLKQLSQSSNrNQAATDDTTPTSQHRFLVDYCKKLHVR 186
                 556666689********999455556666669***********76544 PP

>> YGGT  YGGT family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.2   0.00016      0.36      18      41 ..      49      79 ..      41      81 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00016
        YGGT 18 sw.......pnpfynpiaqflyklTePllap 41
                +w       +npf+np+++fl+ l  P+++p
  EPX71312.1 49 TWslfesnpSNPFVNPVSRFLRSLSHPFIRP 79
                46666678999******************99 PP

>> Plk4_PB2  Polo-like Kinase 4 Polo Box 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   3.4     0.016        36      47      95 ..     187     235 ..     102     243 .. 0.71

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.016
    Plk4_PB2  47 eksgksltleseeeleslsselkkllehaeeclkqclklesalssleke 95 
                  +  +s   + + el++l+s  +++l+++++  ++cl+ +++l+slek+
  EPX71312.1 187 RNVHTSELTQIDAELSKLHSRRRQILNKLNHAEDKCLEFDAQLTSLEKT 235
                 3333333333347899999999999999999999999999999998865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (661 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1025  (0.0571699); expected 358.6 (0.02)
Passed bias filter:                      555  (0.0309554); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.69u 0.30s 00:00:00.99 Elapsed: 00:00:00.45
# Mc/sec: 4366.46
//
Query:       EPX71313.1  [L=523]
Description: ammonium transporter Amt2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     2e-114  382.4  28.8   2.3e-114  382.2  28.8    1.0  1  Ammonium_transp  Ammonium Transporter Family


Domain annotation for each model (and alignments):
>> Ammonium_transp  Ammonium Transporter Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  382.2  28.8  1.3e-118  2.3e-114       2     398 ..      60     467 ..      59     468 .. 0.96

  Alignments for each domain:
  == domain 1  score: 382.2 bits;  conditional E-value: 1.3e-118
                      HHHHHHHHHHHHHHHHHHHHHHHSSGGGHHHHHHHHHHHHHHHHHHHHHTHHHHHHSSCBSSSSSCE-.......TTTTSCCGCCTTCCHHHHH CS
  Ammonium_transp   2 flllsaalvifmqagfalleaglvrsknvlnilvknlldlavvvllyvlfGyslafgkskgvsgfign.......lglsaagvqdetlldglff 88 
                      ++l s+ l ++m++g+a++++gl r+kn+l++++ ++l l+v++++++++Gyslaf++  g sg+ign       + l+  + + + + +++f+
       EPX71313.1  60 WMLTSTCLCLIMVPGVAFFYSGLARRKNTLALIMLSMLGLCVTLFQWYFWGYSLAFSQT-GTSGYIGNlrhfafiRTLADYSPSSNYVSELVFA 152
                      9********************************************************97.********99987754555555555556677799 PP

                      HHHHHHHHHHHHHHHHHCTTTB-HHHHHHHHHHHHHHTHHHHHHHHHS.SSHHHHTT--.-SSSTTTTHHHHHHHHHHHHHHHS-STTTTGTTT CS
  Ammonium_transp  89 lfqlafaataitivsgavaerikfsayllfsallgtlvyppvahwvwgeggwlaklgvliDfAgstvVHlvggvagLaaalvlgkregrfegke 182
                       fq  faa+++++++ga+aer ++ ++ll+ ++++t+vy+p+++w+w+ +gw++k+gv+ DfAg++ V + +g+a+La++++lg+r +     +
       EPX71313.1 153 NFQGIFAAITVALFTGAAAERGRIGPMLLITFIWLTVVYCPLTCWIWNPNGWAYKWGVY-DFAGGGPVEVGSGFAALAYTVCLGRRSKFL---A 242
                      ***********************************************************.***************************988...9 PP

                      SS--GSBHHHHHHHHHHHHHHHHHHHHGGGSSSSHHHHH.HHHHHHHHHHHHHHHHHHHHHHHC.SS-BHHHHHHHHHHHHHHHTTTTTTS-HH CS
  Ammonium_transp 183 eaikghnlpfavlGtllLwfgWfgFNaGsaltankrararaavtTllAaaagaltallisrlke.gkinvlglanGilAGlVAiTaacavvepw 275
                      e++++h+++ +vlGt+lLwfgW+gFN+Gsa++ n ra+  a+ +T+l aa+++l+++l +++ +  k++++g ++G++AGlVA+T+ +++v+p 
       EPX71313.1 243 EQYRPHSVLNVVLGTALLWFGWLGFNGGSAYGSNLRAAI-AITNTNLTAATAGLVWVLYDYIFKtRKWTTIGFCSGVVAGLVAATPCAGFVSPH 335
                      **************************************9.*********************865489*************************** PP

                      HHHHHHHHHHHHHHHHHHHHHHHHTC-CTTHHHHHHHHHHHHHHHHHHHHTSHHHC........SSHSSTTGGGT-CHHHHHHHHHHHHHHHHH CS
  Ammonium_transp 276 gAliiGlvAgvlsvlgvkklkeklkidDsldvvavHgvgGiwGllavgifaaekvv........askisggllsgegkqlvvqligilvilaya 361
                       +l+iG+++g+++++++ +lk+++kidD++d++a+Hgv+G++G++++g+fa ++ +         + i+gg+++++++ql+ q+++i++++ay 
       EPX71313.1 336 TSLAIGAITGLICNWAI-LLKTHMKIDDAMDIFAIHGVAGFVGTILNGLFAVDYIAamdgtfvgDNAIRGGWFNHHWRQLGLQVAYICAVAAYD 428
                      *****************.6**********************************9989*****99999*************************** PP

                      HHHHHHHHHHHHHHTT..SB--HHHHHHSHHHHHHSSSS CS
  Ammonium_transp 362 fvvtlilllllklllg..LrvseeeeevglDvaehgeta 398
                      fvvt+i+l++ ++++   Lrv++++ee+g D  ++ge a
       EPX71313.1 429 FVVTFIILFIADKIPFlqLRVTPDAEEIGVDADQIGEYA 467
                      *************99888*****************9977 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (523 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       753  (0.041999); expected 358.6 (0.02)
Passed bias filter:                      396  (0.0220871); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.30s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 3474.89
//
Query:       EPX71314.1  [L=110]
Description: hypothetical protein SOCG_01533 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.011   16.0   0.1      0.014   15.6   0.1    1.3  1  DUF5442   Family of unknown function (DUF5442)
      0.019   15.7   1.3       0.03   15.1   0.3    1.7  2  TbpB_A    N-Lobe handle Tf-binding protein B
      0.038   14.2   1.8      0.042   14.1   0.8    1.6  2  UPF0122   Putative helix-turn-helix protein, YlxM / p13 like


Domain annotation for each model (and alignments):
>> DUF5442  Family of unknown function (DUF5442)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.6   0.1   2.4e-06     0.014      19      78 ..      35      96 ..      20     107 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 2.4e-06
     DUF5442 19 kfvakgaiikygdiseelkk.sekeklkeylkdisirtvnciikrfeddpqaylvn.dtlny 78
                ++v  g +ik g+ s e +   e+e++     d   +t + ++ rfe++ + ++v  d ln 
  EPX71314.1 35 EYVRNGPVIKQGNASAEGRIgQENERIEMESIDECLKTTEQLLTRFENEMKEFHVRmDELND 96
                58999**********9987526888999999999******************9985366664 PP

>> TbpB_A  N-Lobe handle Tf-binding protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   0.3   5.1e-06      0.03      70     118 ..      11      59 ..       2      67 .. 0.82
   2 ?    0.5   0.1      0.16   9.3e+02      46      86 ..      60     105 ..      53     109 .. 0.48

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 5.1e-06
      TbpB_A  70 kksdekesfvhshdgskksrkrdyqYVrsGyvlkkegskekkdkkekkl 118
                    ++k ++v ++dg++ + + + +YVr G v+k+++++ + +  +++ 
  EPX71314.1  11 EEMENKHDPVSDSDGKNGEFEVQKEYVRNGPVIKQGNASAEGRIGQENE 59 
                 45678889*************************9999999888777765 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.16
      TbpB_A  46 plseedi....ekvedellkipkeke.vkkksdekesfvhshdgsk 86 
                 ++++e+i    +++e  l+ +++e +  +   de ++ ++  d +k
  EPX71314.1  60 RIEMESIdeclKTTEQLLTRFENEMKeFHVRMDELNDLMNEEDFQK 105
                 3333444333333333444555554435566666666666666555 PP

>> UPF0122  Putative helix-turn-helix protein, YlxM / p13 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       0.6   3.6e+03      39      48 ..       9      18 ..       2      38 .. 0.56
   2 ?   14.1   0.8     7e-06     0.042      41      94 ..      57     107 ..      52     110 .] 0.75

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.6
     UPF0122 39 iAeefnvsrq 48
                i ee++ ++ 
  EPX71314.1  9 IVEEMENKHD 18
                3333333333 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 7e-06
     UPF0122  41 eefnvsrqavydnikrtekllekyEekLkllekykkreellekikdkllkqkel 94 
                 e+  ++ +++ +++k+te+ll+++E+ +k   ++++r + l+++++++  qk++
  EPX71314.1  57 ENERIEMESIDECLKTTEQLLTRFENEMK---EFHVRMDELNDLMNEEDFQKYS 107
                 45678999******************974...6667766666666666665655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1175  (0.0655363); expected 358.6 (0.02)
Passed bias filter:                      540  (0.0301188); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.29s 00:00:00.72 Elapsed: 00:00:00.45
# Mc/sec: 735.22
//
Query:       EPX71315.1  [L=79]
Description: LYR family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.6e-09   35.7   1.7      8e-09   35.4   1.7    1.1  1  Complex1_LYR    Complex 1 protein (LYR family)
  ------ inclusion threshold ------
      0.052   14.3   0.7      0.058   14.1   0.7    1.2  1  Complex1_LYR_2  Complex1_LYR-like


Domain annotation for each model (and alignments):
>> Complex1_LYR  Complex 1 protein (LYR family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.4   1.7     9e-13     8e-09       1      57 [.       8      65 ..       8      67 .. 0.96

  Alignments for each domain:
  == domain 1  score: 35.4 bits;  conditional E-value: 9e-13
  Complex1_LYR  1 rqvLsLYRalLRearkfpdyntreyfrrriRdeFrknkh..vtDpekieellkkgreeL 57
                  +qv++ YR++L +a++++++  + ++ + + +eFr+n+   +t +  ie+ll+ g+++ 
    EPX71315.1  8 KQVIRFYRQCLHAAKQKEHIY-QPHWLEFVHKEFRRNQTipRTEFFYIEHLLRIGQRRY 65
                  69*******************.**********************************986 PP

>> Complex1_LYR_2  Complex1_LYR-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.7   6.5e-06     0.058       1      37 [.      10      46 ..      10      76 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 6.5e-06
  Complex1_LYR_2  1 vlsLYrrllrelrelppelrslgdayvraefrrhkhl 37
                    v+++Yr+ l +++++ +  + ++ + v++efrr++ +
      EPX71315.1 10 VIRFYRQCLHAAKQKEHIYQPHWLEFVHKEFRRNQTI 46
                    7899********86566666*************8855 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       585  (0.0326287); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.26s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 593.80
//
Query:       EPX71316.1  [L=673]
Description: hsp70-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   6.4e-261  866.8  11.2   7.3e-261  866.6  11.2    1.0  1  HSP70     Hsp70 protein
    4.3e-15   55.4   2.6    5.2e-13   48.5   0.8    2.4  2  MreB_Mbl  MreB/Mbl protein
     0.0012   19.2   2.6        1.2    9.6   0.0    3.3  3  FtsA      Cell division protein FtsA
  ------ inclusion threshold ------
      0.012   15.3   0.1      0.058   13.1   0.0    2.0  2  FGGY_C    FGGY family of carbohydrate kinases, C-terminal dom


Domain annotation for each model (and alignments):
>> HSP70  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  866.6  11.2  1.6e-264  7.3e-261       1     598 [.      52     653 ..      52     654 .. 0.99

  Alignments for each domain:
  == domain 1  score: 866.6 bits;  conditional E-value: 1.6e-264
                 EEEEEEXSSEEEEEEEETTEEEEEXXTTSXSSEESEEEEXTT.SEEETHHHHHCTTTTGGGEEEXGGGTTTXBTTSHHHHHHHTTXSSEEEEETTSBEE CS
       HSP70   1 viGiDLGttnsvvavmeggkievianeegnrttPsvvaFtkk.erlvGeaAkrqavtnpkntvfsvKrliGrkfsdpevqkeikelpykvvkkengkav 98 
                 viGiDLGtt+s++a+meg++++vian+eg+rttPsvvaF+k+ erlvG +Akrqav np+nt++++KrliGr+f++pevq++i+e+pyk+v+++ng+a+
  EPX71316.1  52 VIGIDLGTTTSCLAIMEGETPKVIANAEGTRTTPSVVAFNKDnERLVGVSAKRQAVINPENTFYATKRLIGRRFKEPEVQRDIHEVPYKIVEHTNGDAW 150
                 79***************************************99******************************************************** PP

                 EEEEETTEEEEHHHHHHHHHHHHHHHHHHHHTSBEEEEEEEEXTTXXHHHHHHHHHHHHHTTXEEEEEEEHHHHHHHHHHTCCSSSCEEEEEEEEXSSX CS
       HSP70  99 veveaagekftpeqisamvLkklketaeaylgkkvtdavitvPaYfndaqRqatkdAgkiAGLnvlRivNepTAaalaYGldkkdkernvlvyDlGggt 197
                 +e++  g+k++p+qi++++L k+keta+++lgk+v++av+tvPaYfnd+qRqatk Ag+iAGLnv+R+vNepTAaalaYGldkk+ + +v+v+DlGggt
  EPX71316.1 151 LEAR--GQKYSPSQIGGFILGKMKETASDFLGKNVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVMRVVNEPTAAALAYGLDKKN-DAVVAVFDLGGGT 246
                 ****..******************************************************************************9.************* PP

                 EEEEEEEEETTEEEEEEEEEETTXSHHHHHHHHHHHHHHHHHHHHSXXGGGSHHHHHHHHHHHHHHHHHTTTSSCSEEEEEEEEEETTT.EEEEEEEEH CS
       HSP70 198 fdvSilelekGvfevkaTagDthlGGedfDealvehlveefkkkegidlskdkkalqrlkeaaekaKkeLSsskqteinleietvdedg.kdlseklsR 295
                 fdvSilel++Gvfev++T+gDthlGGedfD a+v+h++++fk++ +idl+ d+ a+qr++eaaekaK+eLS+ ++t+i+l+++t+d++g k++++++sR
  EPX71316.1 247 FDVSILELNNGVFEVRSTNGDTHLGGEDFDIAIVRHIINTFKSSDNIDLTGDRLAVQRIREAAEKAKCELSTLSKTDISLPFITADATGpKHINIEISR 345
                 *************************************************************************************************** PP

                 HHHHHHHHHHHHHTHHHHHHHHHHCTEEGGGCSEEEEESGGGGSHHHHHHHHHHTTCHHBSSSHTTTHHHHHHHHHHHHHCTCGCSHCCEEEEBESS-E CS
       HSP70 296 akfeelvedllertlepvekalkdaklkkeeidevvlvGGstRiPkvqelvkelfgkepsktvnpDeavaiGAAvqagvlsgeeevkdllllDvtpLsl 394
                 a+fe++v++l++rt++p+++alkda+l++ +++ev+lvGG+tR+P+v ++vk++f++ep k+vnpDeavaiGAA+q+gvlsg  +vkdl+llDvtpLsl
  EPX71316.1 346 AQFEKIVDPLVRRTVDPCKRALKDANLQVTDVNEVILVGGMTRMPRVLDTVKSIFKREPAKSVNPDEAVAIGAAIQGGVLSG--HVKDLVLLDVTPLSL 442
                 **********************************************************************************..*************** PP

                 EEEETTTEEEEEESTTCBSSEEEEEEEEESSTTSSSEEEEEEESSSSBGGGSEEEEEEEEECESSCSTTCSEEEEEEEEETTSCEEEEEEETTTCCEEE CS
       HSP70 395 gietlggvmtkliernttiptkksqvfstaadnqtaveievlqgerelvkdnkllgsfeldgippaprGvpqieVtfdidanGiltvsakdketgkeee 493
                 gietlggv+t+li+rnttipt+ksqvfstaad+qtavei+v+qgerelv+dnkl+g+f+l gi pap+G+pqieV+fd+da+Gi++vsa+dk+t+k+++
  EPX71316.1 443 GIETLGGVFTRLINRNTTIPTRKSQVFSTAADGQTAVEIRVFQGERELVRDNKLIGNFQLGGIAPAPKGQPQIEVSFDVDADGIINVSARDKATNKDNS 541
                 *************************************************************************************************** PP

                 EEEECCSSSBHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSTHHHHHHHHHHHHHHHCHTTSSC.......HHHHHHHHHH CS
       HSP70 494 itieaseglseeeiekmvkdaeesaeedkkkkeaieakneaeelvyslekkleeeaekvseaekekvesaieeLkeeleeee.......keeieaktee 585
                 it++ s+glse+eie+mv dae+++++d ++k+aie+ n+ae+++ ++e++l+ ++ek++++  e+++++i+e++e++++++        e++++k++e
  EPX71316.1 542 ITVAGSSGLSESEIESMVADAEKYRAADMARKDAIENGNRAESVCMDIESNLDIHKEKLEKQGVEDLRAKITEVRENIAKANsgdesvtGEDLKKKIDE 640
                 ****************************************************************9999999999998877766777888899******* PP

                 HHHHHHHHHHHHH CS
       HSP70 586 lkkvvekiaekly 598
                 l++++ k++e++y
  EPX71316.1 641 LQQASLKVFETVY 653
                 ********99988 PP

>> MreB_Mbl  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.1   0.0   0.00095       4.3       4      46 ..      53     104 ..      50     114 .. 0.65
   2 !   48.5   0.8   1.2e-16   5.2e-13      93     316 ..     183     419 ..     166     426 .. 0.78

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.00095
                 EEEEE-SSEE.EEEETTTE..EEEE......EES-EEEETTT--EEEESHHH CS
    MreB_Mbl   4 lgiDLGtant.lvyvkgkg..ivln......epsvvAikkktkkvlavGeeA 46 
                 +giDLGt++  l+ ++g+   ++ n       psvvA++k++++++ v  + 
  EPX71316.1  53 IGIDLGTTTScLAIMEGETpkVIANaegtrtTPSVVAFNKDNERLVGVSAKR 104
                 89****9876155666653324444323222699999999999987765544 PP

  == domain 2  score: 48.5 bits;  conditional E-value: 1.2e-16
                 --EEEEEE-SS--HHHHHHHHHHHHHTT-SEEEEEEHHHHHHHHTT--TTSSS-EEEEEE-SS-EEEEEEETT.EEEEEEE....ES-SHHHHHHHHHH CS
    MreB_Mbl  93 kprvvicvPsgiteverrAvkeaakkaGarevllieeplaAAiGaglpveepsgnmvvdiGggttevavislg.givtsks....vrvaGdeldeaiik 186
                  ++ v++vP   ++ +r+A k a   aG +   +++ep aAA+  gl+ ++ +   v d+Gggt +v+++ l+ g+ + +s     +++G+++d ai++
  EPX71316.1 183 VKNAVVTVPAYFNDSQRQATKAAGAIAGLNVMRVVNEPTAAALAYGLDKKNDAVVAVFDLGGGTFDVSILELNnGVFEVRStngdTHLGGEDFDIAIVR 281
                 46789******************************************************************97245555552223579*********** PP

                 HHHHHHSE.....E--HHHH.HHHHHHH-BSS--HHHH.EEEEE....EEETTTTCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHHHHH CS
    MreB_Mbl 187 yirkkynl.....liGerta.ekikieigsavkeeeee.kmeik....GrdlvtglpkevevsseevrealkepvsaiveavkevLektppeLaadivd 274
                 +i ++++      l G+r a ++i+ +  +a++e ++  k++i+      d +     ++e+s ++ ++ +   v++ v+  k++L+++  + ++d+  
  EPX71316.1 282 HIINTFKSsdnidLTGDRLAvQRIREAAEKAKCELSTLsKTDISlpfiTADATGPKHINIEISRAQFEKIVDPLVRRTVDPCKRALKDANLQ-VTDV-- 377
                 *9998875222233465544244555554444443333455554111144544445557889999*********************998765.4677.. PP

                 H-EEEESGGGGSBTHHHHHHHHHSS-EEE-SSTTTHHHHHHH CS
    MreB_Mbl 275 rgivltGGgallkgldkllseetglpvkvaedpltcvakGtg 316
                 + ++l+GG + +  + +++++ ++ +   + +p ++va G++
  EPX71316.1 378 NEVILVGGMTRMPRVLDTVKSIFKREPAKSVNPDEAVAIGAA 419
                 558999********9999******9999999********987 PP

>> FtsA  Cell division protein FtsA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.0   0.0   0.00081       3.6       1      22 [.      53      74 ..      53      93 .. 0.84
   2 !    9.6   0.0   0.00026       1.2       1     102 [.     238     416 ..     238     417 .. 0.63
   3 ?   -2.0   0.1       1.1     5e+03      60      61 ..     579     597 ..     531     661 .. 0.48

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.00081
                EEEEE-SSSEEEEEEETTEEEE CS
                xxxxxxxxxxxxxxxxxxxxxx RF
        FtsA  1 alvDiGagktdvavaedgalvh 22
                +++D+G++++++a++e++ ++ 
  EPX71316.1 53 IGIDLGTTTSCLAIMEGETPKV 74
                58**************987654 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00026
                 EEEEE-SSSEEEEEEETTEEEE.EEEES-......-HHHHHHHHHHHHT--HHHHHHHHHHH--S--...........................EEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxx.xxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...........................xxxxx RF
        FtsA   1 alvDiGagktdvavaedgalvh.lrvigv......ggngitkdiakalrtaveeAerikikyGsala...........................ekeig 65 
                 a+ D+G+g+ dv+++e ++ v+ +r+  +      gg+ ++  i++ + + +++  +i    G  la                                
  EPX71316.1 238 AVFDLGGGTFDVSILELNNGVFeVRS--TngdthlGGEDFDIAIVRHIINTFKSSDNID-LTGDRLAvqrireaaekakcelstlsktdislpfI---- 329
                 678*************9653333333..2335556777777777777766666666666.33333334444444443333333333344444550.... PP

                 HHHHH......................................................GGGGSTTHHHHHHHHHT-..HHHT-GGGHHHH CS
                 xxxxx......................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        FtsA  66 rkels......................................................ggsalpnleelaeralspkleevsdpeyasal 102
                     +                                                      g + +p + + ++++++ +  +  +p  a+a+
  EPX71316.1 330 ----TadatgpkhinieisraqfekivdplvrrtvdpckralkdanlqvtdvnevilvgGMTRMPRVLDTVKSIFKREPAKSVNPDEAVAI 416
                 ....155555555555555777779999999999999999999999999999999999999999999999999994432335566666666 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 1.1
                 -.................E CS
                 x.................x RF
        FtsA  60 a.................e 61 
                                   +
  EPX71316.1 579 GnraesvcmdiesnldihK 597
                 1333344444444222221 PP

>> FGGY_C  FGGY family of carbohydrate kinases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.41   1.8e+03       7      25 ..      61      81 ..      58     120 .. 0.74
   2 ?   13.1   0.0   1.3e-05     0.058     148     196 ..     375     424 ..     345     425 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.41
      FGGY_C  7 Tssflllvgtkpv..isehgl 25
                Ts++++++g++p+   +++g 
  EPX71316.1 61 TSCLAIMEGETPKviANAEGT 81
                899999999888854444444 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 1.3e-05
      FGGY_C 148 kpldrlavdGGgskndllmqllAdilg.vpVerpktaeatalGaAilAav 196
                  ++++++++GG+++ + ++ +  +i+   p + + ++ea+a+GaAi ++v
  EPX71316.1 375 TDVNEVILVGGMTRMPRVLDTVKSIFKrEPAKSVNPDEAVAIGAAIQGGV 424
                 4599***********************99*****************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (673 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1016  (0.056668); expected 358.6 (0.02)
Passed bias filter:                      623  (0.0347482); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.82u 0.35s 00:00:01.17 Elapsed: 00:00:00.55
# Mc/sec: 3657.38
//
Query:       EPX71317.1  [L=819]
Description: kinesin-like protein Klp2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.1e-102  343.5   0.1   1.1e-102  343.5   0.1    2.3  2  Kinesin          Kinesin motor domain
    9.6e-57  191.1   0.0    9.6e-57  191.1   0.0    2.9  3  Microtub_bd      Microtubule binding
  ------ inclusion threshold ------
        2.4    8.2  24.9       0.12   12.5   3.9    4.4  5  DUF1664          Protein of unknown function (DUF1664)
        4.9    6.9  13.8       0.13   11.9   1.3    3.7  4  Nbl1_Borealin_N  Nbl1 / Borealin N terminal


Domain annotation for each model (and alignments):
>> Kinesin  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   2.8       1.2   5.3e+03      20      54 ..     287     322 ..     224     351 .. 0.53
   2 !  343.5   0.1  2.4e-106  1.1e-102       1     332 [.     481     808 ..     481     809 .. 0.93

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 1.2
                 EECTCTCEEEEEEEEECTTS.CEEEEESEEEETTS- CS
     Kinesin  20 veeekkeeekkskkenkeee.ekkfkFdkvfdeeat 54 
                 ++ee+++ + +sk++ +e e + +   ++v +e++t
  EPX71317.1 287 YSEEHNNLQLQSKQRMEEIEnHYEQLMKNVSAEHET 322
                 221222222222222211110111223333333333 PP

  == domain 2  score: 343.5 bits;  conditional E-value: 2.4e-106
                 EE-SSSHHHHTTTTEBCEEEEC....TCTCEEEEEEEEECTTSCEEEEESEEEETTS-HHHHHHHHHHHHHHHHHTTSEEEEEEEESTTSSHHHHHTBC CS
     Kinesin   1 RvRplnekekeeeeeeevevee....ekkeeekkskkenkeeeekkfkFdkvfdeeatqeevyeetakplvesvleGynatifaYGqtgsGKTyTmegk 95 
                 RvRp   +ek +e +   + ee    e  +e + s+ + ++ ++  fkFd+vf+++ ++ee++ee+ ++l++s+++Gyn++ifaYGqtgsGKTyTm+  
  EPX71317.1 481 RVRPCMGDEKPAEINYPGQGEEaneiEVLTEGTGSSLTGNSLKKYPFKFDRVFAPDINNEEIFEEI-SQLIQSAMDGYNVCIFAYGQTGSGKTYTMSSP 578
                 7888888888888777766665444445556667778889999**********************5.******************************97 PP

                 TTTSBSHHHHHHHHHHHHHHHCTTTHEEEEEEEEEEEEEETTEEEETTSTTT..TSTSSEBEEEECTTSCCEEETTS--EEESSHHHHHHHHHHHHHHH CS
     Kinesin  96 eeeeeGiipraleelFesikkekeekekefsvkvsylEiYneeiyDLLeskk..skkkkklkiredskkgevyvkgltevevksaeevlellekgeknr 192
                     +G+ip a++ ++++    +e+  +e++++ ++lEiYne+i DLL s++  +++kkk++i++d+k+g++ v++l  + ++++e+v  lle+++knr
  EPX71317.1 579 ----TGMIPCAVQMIYNRAFGLRER-GWEYRMEGQFLEIYNESIKDLLVSNSndDNDKKKYEIYHDAKEGKTWVTNLAREPLENSEQVSWLLEQSAKNR 672
                 ....8****************9998.9*********************999877667779*************************************** PP

                 TSTTSSCTSHHCCSEEEEEEEEEEEETTTTTCEEEEEEEEEEEEEEECCCHHHHSSTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTSTSCGGGSHHH CS
     Kinesin 193 kvaetklneeSSRSHavftitleqknlkeeteekvkisklnLvDLAGsErasktgaaegerlkEaaniNkSLlaLgrvisaLaekkkskhipYRdSkLT 291
                  va+t++ne+SSRSH+vf+++++  n+ ++++    +s+lnL+DLAGsEr+s+++ ++g+rlkE+++iNkSL++Lg+vi+aL  +k+ +++pYR+SkLT
  EPX71317.1 673 FVAATNANEHSSRSHSVFMLHIQGINHLTGER---CHSTLNLIDLAGSERLSHSQ-STGDRLKETQAINKSLSCLGDVIHALGGEKEGTYVPYRNSKLT 767
                 **************************998777...89******************.589**************************************** PP

                 HHTGGGHSSSSEEEEEEEE-TBGGGHHHHHHHHHHHHHHCT CS
     Kinesin 292 rlLqdsLgGnsktlmivtvspssenleetlstlkfaerake 332
                 +lLq+sLgGnsktlm+v+vsp +++++etl++l+fa+++++
  EPX71317.1 768 NLLQHSLGGNSKTLMFVNVSPVQQHVSETLCSLRFATKVNN 808
                 *************************************9987 PP

>> Microtub_bd  Microtubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   3.0       1.5   6.6e+03      63      75 ..     301     313 ..     230     393 .. 0.55
   2 ?   -2.1   0.0      0.72   3.2e+03       4      19 ..     409     424 ..     406     428 .. 0.83
   3 !  191.1   0.0   2.1e-60   9.6e-57       2     149 .]     456     621 ..     455     621 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.5
                  HCCCCCCCCHHHH CS
  Microtub_bd  63 eqeevfeeisqlv 75 
                    ee+ + ++ql+
   EPX71317.1 301 RMEEIENHYEQLM 313
                  2222222222222 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.72
                  HHHHHHHCHHHHHHHC CS
  Microtub_bd   4 eetlRrkleNtiqelk 19 
                  +e++ r leNt+ el 
   EPX71317.1 409 SESRCRSLENTVVELE 424
                  678889******9985 PP

  == domain 3  score: 191.1 bits;  conditional E-value: 2.1e-60
                  HHHHHHHHHCHHHHHHHCTB-EEEEEEECCCS-T..EEEETT...T....................TTTEEEE-SEEEECTTHCCCCCCCCHHHHHHH CS
  Microtub_bd   2 ekeetlRrkleNtiqelkGniRvfarvrpelesek.akikfp...e.................eekkkkkefsFdrvfeseseqeevfeeisqlvqsa 78 
                   kee++Rrkl+NtiqelkGniRvf+rvrp   +ek a+i++p   e                  ++ kk+ f+Fdrvf ++ ++ee+feeisql+qsa
   EPX71317.1 456 LKEESMRRKLHNTIQELKGNIRVFCRVRPCMGDEKpAEINYPgqgEeaneievltegtgssltGNSLKKYPFKFDRVFAPDINNEEIFEEISQLIQSA 553
                  589*****************************98789*****7661566788889999999998899******************************* PP

                  HTT--EEEEEEES................ST-HCHHHHHHHHHHCCTSCCCCEEEEEEEEEEESS-EEETT CS
  Microtub_bd  79 ldgynvcifaygqTGsGKtyTmegeeeeagmipraveeifetiselkekgwkyeielqfveiynekvqDlL 149
                  +dgynvcifaygqTGsGKtyTm++    +gmip av++i++ +  l+e+gw+y++e+qf+eiyne+++DlL
   EPX71317.1 554 MDGYNVCIFAYGQTGSGKTYTMSS---PTGMIPCAVQMIYNRAFGLRERGWEYRMEGQFLEIYNESIKDLL 621
                  ************************...99*****************************************8 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   2.5    0.0019       8.5      37     118 ..     167     248 ..     164     264 .. 0.87
   2 ?   -0.8   2.8      0.34   1.5e+03      48      77 ..     238     267 ..     231     326 .. 0.72
   3 ?    3.3   2.0     0.017        77      54     122 ..     299     369 ..     286     371 .. 0.71
   4 ?   12.5   3.9   2.6e-05      0.12      48     122 ..     358     432 ..     346     434 .. 0.93
   5 ?    5.5   0.4    0.0037        17      49     107 ..     415     473 ..     413     479 .. 0.69

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0019
     DUF1664  37 rslsdavesvskqleqvseslaatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeavegleskle 118
                 rs++ a +++s+++ q s++  ++k+ +s+r + ++++l++  + s +++++ +++ ++++e + +    k+ +e+l++ le
  EPX71317.1 167 RSIELAYANLSEKVLQTSTQSPDVKDFFSQRTQMLEESLQNERNRSLSLQNDYSTLLREVAEHEANQIFSKKQIENLKEALE 248
                 7889999********************************************9999999998877776666777777776665 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.34
     DUF1664  48 kqleqvseslaatkrhLssridrvdkklde 77 
                 kq+e+++e+l+ + r+  ++i+ ++ +   
  EPX71317.1 238 KQIENLKEALEGAEREHHRQIEDMEVNHAR 267
                 899999999999999999999998866544 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.017
     DUF1664  54 seslaatkrhLssridrvdkkldeq.keiskeikeevtevredls.eigedvesvkeavegleskleriee 122
                 ++ +++  +h ++ +++v ++ + + k++++e ++ +++v+e+ s ++++  e+ + a+++le++++ +ee
  EPX71317.1 299 KQRMEEIENHYEQLMKNVSAEHETMvKNVTEEKDAFIKKVQEGASlALKKTTEKHEVAIKELEARIKPLEE 369
                 45566667777777777777777762456667777788899888734677777777789999999998886 PP

  == domain 4  score: 12.5 bits;  conditional E-value: 2.6e-05
     DUF1664  48 kqleqvseslaatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeavegleskleriee 122
                 k+le   + l++ +++L+s++++ +++l+ qke+s+ ++++++e +  l + ++  +s++++v +le+k +++++
  EPX71317.1 358 KELEARIKPLEESRDNLASELEQTQNSLKLQKETSTFLQANLDERSTALLNSESRCRSLENTVVELEQKNQNLQN 432
                 789999999************************************************************988875 PP

  == domain 5  score: 5.5 bits;  conditional E-value: 0.0037
     DUF1664  49 qleqvseslaatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvk 107
                 +le+   +l++  ++L++r+ +v++ ld+++  ++ + +++ + ++  +++++ ++++k
  EPX71317.1 415 SLENTVVELEQKNQNLQNRLSEVESLLDASNSDKQTLINKLLKEESMRRKLHNTIQELK 473
                 67888888888889999999999998888887777777777665555555555555444 PP

>> Nbl1_Borealin_N  Nbl1 / Borealin N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   1.3     3e-05      0.13       7      36 ..     292     321 ..     292     325 .. 0.92
   2 ?    2.0   0.3     0.037   1.7e+02      11      35 ..     358     382 ..     358     387 .. 0.90
   3 ?   -2.9   0.1       1.2   5.3e+03       2      31 ..     426     455 ..     423     462 .. 0.64
   4 ?   -1.4   0.1      0.41   1.8e+03      18      35 ..     459     476 ..     456     478 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 3e-05
  Nbl1_Borealin_N   7 enfdlEveeRirrlraelelllktlrnrfe 36 
                      +n++l+ ++R++++++++e+l+k+++++ e
       EPX71317.1 292 NNLQLQSKQRMEEIENHYEQLMKNVSAEHE 321
                      59**********************998766 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.037
  Nbl1_Borealin_N  11 lEveeRirrlraelelllktlrnrf 35 
                      +E+e Ri+ l+++ ++l+ +l++ +
       EPX71317.1 358 KELEARIKPLEESRDNLASELEQTQ 382
                      699****************999876 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 1.2
  Nbl1_Borealin_N   2 kealLenfdlEveeRirrlraelelllktl 31 
                      k++ L+n   Eve+   + +++ ++l+++l
       EPX71317.1 426 KNQNLQNRLSEVESLLDASNSDKQTLINKL 455
                      555566666667766666666677666665 PP

  == domain 4  score: -1.4 bits;  conditional E-value: 0.41
  Nbl1_Borealin_N  18 rrlraelelllktlrnrf 35 
                      + +r +l +++++l+ ++
       EPX71317.1 459 ESMRRKLHNTIQELKGNI 476
                      78**********998666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (819 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2879  (0.160578); expected 358.6 (0.02)
Passed bias filter:                      574  (0.0320152); expected 358.6 (0.02)
Passed Vit filter:                        94  (0.0052429); expected 17.9 (0.001)
Passed Fwd filter:                        31  (0.00172904); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.25u 0.38s 00:00:01.63 Elapsed: 00:00:00.60
# Mc/sec: 4114.36
//
Query:       EPX71318.1  [L=630]
Description: gamma-glutamyltranspeptidase Ggt1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.2e-174  581.9   0.0   1.4e-174  581.7   0.0    1.0  1  G_glu_transpept  Gamma-glutamyltranspeptidase


Domain annotation for each model (and alignments):
>> G_glu_transpept  Gamma-glutamyltranspeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  581.7   0.0  7.6e-179  1.4e-174       2     511 ..     115     624 ..     114     625 .. 0.98

  Alignments for each domain:
  == domain 1  score: 581.7 bits;  conditional E-value: 7.6e-179
                      HHHHTT--HHHHHHHHHHHHHHHSTTT-STTSEEEEEEEETTSCEEEEEEE--BB-TT--TTTTTSCBCCHHHHSSGGG-BB--HHHHHHHHHH CS
  G_glu_transpept   2 evLrkGGnAvDAavAaalclgvvepqssGiGGGgfllvydaktkkvealdaretAPaaatkdmfdkegdsklsktgalavgVPGevagleeahk 95 
                      e+L++GGnAvDAa+A+ +c+g v+ +ssGiGGGgf+l+++ ++++  +l++retAP+   kdmf  +g++++s++g+l+v+VPGe+ag+e a+k
       EPX71318.1 115 EILKAGGNAVDAAIASGICIGAVNSFSSGIGGGGFMLIRHPNGTAN-SLNFRETAPSGSYKDMF--HGNPNVSQVGGLSVAVPGEIAGYEVAWK 205
                      8******************************************988.8****************..**************************** PP

                      HH-SS-HHHHHHHHHHHHHH-EE--HHHHHHHHHCHHH.HHTSHHHHHHHEETTSE--TTSEE--HHHHHHHHHHHHHTTHHHHSSHHHHHHHH CS
  G_glu_transpept  96 kyGklpwadllepaiklareGfpvsealaralaeaeer.lkkdpelaklFlpegevlkagellkqpalAktLerlaeeGaeaFYkGelAeklva 188
                       yGklpwa+l+ep+i+l++ G+p+ ++la+ l++ e + +k++p+++k+++p+g++lkage++++p lA+tLe++++ Gae FYkG++A++lv+
       EPX71318.1 206 LYGKLPWAKLFEPTIHLMKYGMPMPKELASRLRRPEFDyFKTHPTWSKVYAPNGRFLKAGETFYRPTLAATLEEVSKYGAEVFYKGSIAKRLVD 299
                      ************************************999******************************************************* PP

                      HHHHTT-S--HHHHHH---EEES-EEEEETTCEEEEE-TTCSHHHHHHHHHHHHCTTTGGGCTTTC.....HHHHHHHHHHHHHHHHHHHHH-S CS
  G_glu_transpept 189 elqkagGiltaeDLanykvevreplsadyrggytvyepppssggivllqiLnilegfdlkslssns.....aetlhllvEamklayadRsrylg 277
                      ++q++gGilt+eD+an++v v++p+  ++ +g++v++++++ +g vl++ Lnil+++d+++ +s         +lh l+E+mk++ a R+  lg
       EPX71318.1 300 FVQEEGGILTLEDMANFSVIVENPVYGNF-EGREVITCGAPCSGEVLILGLNILSEVDFSQGNSILgceitDLGLHQLIETMKWMSAGRTL-LG 391
                      *****************************.99**************************7766665578999********************.** PP

                      STTTSSSGHCHHHHHT-HHHHHHHHTT.BTTB..SGGGCSCGGCSCG.TTEEEEEEEEETTS-EEEEEEEESSTTTTSEBETTTTEBE--GGGG CS
  G_glu_transpept 278 DpdfvknptelveellskeyakeraklIkdkaatpsseyykaaeaaeesggTthlsvvDregnaVSltstinllFGsgvvvpgtGilLnnemdd 371
                      Dp f +n+ ++v +llsk++a++++++I+++++ +  ++y+a+++ ++++gTthlsv+D++g+aV lt +inllFG++++ pgtGi+Ln++mdd
       EPX71318.1 392 DPTFFDNS-QHVLQLLSKRHADDIRENISPNRTYD-FTHYHAEYDFPQNHGTTHLSVIDKDGMAVGLTASINLLFGAQIMEPGTGIILNDHMDD 483
                      *****988.99************************.69******************************************************** PP

                      SBS.TS..TTSCSTTSTTB--TT----B----EEEEETTEEEEEEEEESGGGHHHHHHHHHHHHHTT-S-HHHHHHS--EEESSSSTEEEESTT CS
  G_glu_transpept 372 fst.gvenafgldpspanaiePgkRplssmaPtivlkdgkpvlvlGaaGGsriisavlqvlvnvldlgldlqeavdaprihhqllpdkvevEeg 464
                      f++ g+ nafgl+psp+n+i+PgkRp ss +Pti++++g++ +vlG++GGsri++avl+++++ ++++++l +++++pr+hhql+p+  +++e+
       EPX71318.1 484 FASpGIINAFGLSPSPYNFIQPGKRPQSSAVPTILVNNGTVEMVLGGSGGSRIVTAVLDTIIKKYKWNKSLLDSIESPRFHHQLMPNIAYIDET 577
                      ********************************************************************************************** PP

                      S.HHHHHHHHHTTSEEEESSSTCCCEEEEEEEETTTEEEEEE-TTTT CS
  G_glu_transpept 465 fseevveeLearGhkvkevedsssvvaavavakekgvleaasDprkd 511
                      +++ev  +Le+ Gh ++  ++ s +++++av+k +++l+a+sD+rk+
       EPX71318.1 578 VEDEVRLALEKFGHVIDLIPVRSPFSEIQAVFKSNNTLYAVSDSRKQ 624
                      *********************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (630 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       581  (0.0324056); expected 358.6 (0.02)
Passed bias filter:                      511  (0.0285013); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.70u 0.34s 00:00:01.04 Elapsed: 00:00:00.51
# Mc/sec: 3722.51
//
Query:       EPX71319.1  [L=654]
Description: actin-like protein Arp8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.3e-29  100.6   0.0    4.4e-17   61.8   0.0    2.7  2  Actin        Actin
    0.00041   19.3   0.0        0.5    9.1   0.0    2.7  2  MreB_Mbl     MreB/Mbl protein
    0.00083   18.6   1.6       0.67    9.1   0.0    2.7  3  Actin_micro  Putative actin-like family
     0.0095   15.0   0.0       0.48    9.4   0.0    2.3  2  PilM_2       Type IV pilus assembly protein PilM;
     0.0099   16.3   0.1       0.45   10.9   0.0    2.7  3  FtsA         Cell division protein FtsA


Domain annotation for each model (and alignments):
>> Actin  Actin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.8   0.0   1.2e-20   4.4e-17       3     192 ..      91     380 ..      89     388 .. 0.87
   2 !   36.0   0.0   8.2e-13   2.9e-09     306     405 ..     545     646 ..     392     648 .. 0.85

  Alignments for each domain:
  == domain 1  score: 61.8 bits;  conditional E-value: 1.2e-20
       Actin   3 evsavVlDnGssttraGyagedaPkavipslvgkprgrkvea......................................................... 44 
                 + ++vV+ +Gs+++r+G a++++Pk+ +p +v+++   + e+                                                         
  EPX71319.1  91 DAKTVVIHVGSQNLRIGLASDHFPKT-VPMVVARKMRVNFEHphlqlskmceknedgnlefdeefennlkllqtelkarlkakknrpvpngpalvnnfn 188
                 5799********************97.59999999999888899******************************************************* PP

       Actin  45 ............................klyvgde....altkrpelevrspvedGvve..dwdave.......elwehvlkeelkvd....peehpll 98 
                                             ++ +g++     l++ pe+ + +p++dG+ +  d+++ +       e++++++ + l++     p +++ +
  EPX71319.1 189 kiskpevipshedplkpdwiqfennerpDVIIGEKasllPLKEYPEYRLFHPLKDGIFNenDYESSQqmfsdiyEILKYSISDLLQIPlsqlP-QYSSV 286
                 ****************************9*****97554455799************972245554411112225666666666666655543.44455 PP

       Actin  99 ltepplnppkqrekalEivfEkfkvpalylaksavlsafasgkstglvvDsGasvtsvvpVldGyvLkkairrsdlgGkaLteqlkellssknv 192
                 +  p l  +   e+ l+++f  +++    ++++  +++f +g s+++vvD+Ga++tsv+ V +G+v+ ++  +++ gG+++t  +++ll ++n+
  EPX71319.1 287 FIVPDLYDRIYIERFLDLLFYDLQFGKSAIVQESLCTSFGAGMSSACVVDVGAEKTSVSCVEEGIVIPNSRINMKYGGDDVTLLFAKLLAKSNF 380
                 6667888899999***************************************************************************998754 PP

  == domain 2  score: 36.0 bits;  conditional E-value: 8.2e-13
       Actin 306 selivaainacdvdlrpeLlanivvtGGnsllpglteRlekelaqlaskgvkvkiiapee..erkysaWiGGSiLAslgtfqqlwvskqEYeEqGssvv 402
                  + i+ a +    d  ++L+++i+++GG +l+pg++  le+ l+ +  +  ++ +  p+   + ++ aW GG i+ +l+ ++++w+  ++++  Gs+v 
  EPX71319.1 545 NQSIFSACEGNLGDQAKNLYSSILIVGGGALFPGFSHLLEERLQSKRANIPNIAVLPPPRglDAQIIAWKGGCIYNRLRIVSEFWIKTSDWKTLGSRVL 643
                 344444444444555899***************************999999******99999***********************************99 PP

       Actin 403 erk 405
                 + k
  EPX71319.1 644 QYK 646
                 876 PP

>> MreB_Mbl  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   0.0   0.00014       0.5      37     180 ..     215     367 ..     204     378 .. 0.70
   2 !    6.7   0.0   0.00076       2.7     268     298 ..     559     588 ..     516     600 .. 0.70

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00014
                 --EEEESHHHHTTTTS-GTTEEEE-SEETTEES..SHHHHHHH.......HHHHHHHHHT..SS-SS--EEEEEE-SS--HHHHHHHHH.HHHHTT-SE CS
    MreB_Mbl  37 kkvlavGeeAkkmlgktpgnikavrPlkdGvia..dlevaeel.......lkyfikkvkk..kkslskprvvicvPsgiteverrAvke.aakkaGare 123
                 +  + +Ge+A  +  k   + +  +PlkdG+    d+e  +++       lky i+++ +   ++l++ + v  vP   + +  +   +    ++   +
  EPX71319.1 215 RPDVIIGEKASLLPLKEYPEYRLFHPLKDGIFNenDYESSQQMfsdiyeiLKYSISDLLQipLSQLPQYSSVFIVPDLYDRIYIERFLDlLFYDLQFGK 313
                 555667888888888888888889999999885337777777733322224555555555555667777778888888888765444441456666677 PP

                 EEEEEHHHHHHHHTT--TTSSS-EEEEEE-SS-EEEEEEETTEEEEEEEE..S-SHHHH CS
    MreB_Mbl 124 vllieeplaAAiGaglpveepsgnmvvdiGggttevavislggivtsksv..rvaGdel 180
                   +++e+l    Gag+     s+  vvd+G+ +t+v+ +  g ++  +++  + +Gd++
  EPX71319.1 314 SAIVQESLCTSFGAGM-----SSACVVDVGAEKTSVSCVEEGIVIPNSRInmKYGGDDV 367
                 8899***********8.....5789*************998777766655225688876 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.00076
                 HHHHHHHH-EEEESGGGGSBTHHHHHHHHHS CS
    MreB_Mbl 268 LaadivdrgivltGGgallkgldkllseetg 298
                  a++++  +i+++GGgal+ g+ +ll+e+++
  EPX71319.1 559 QAKNLY-SSILIVGGGALFPGFSHLLEERLQ 588
                 344443.579999*************99876 PP

>> Actin_micro  Putative actin-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.3      0.67   2.4e+03      25      84 ..      28      89 ..      20     100 .. 0.58
   2 !    8.0   0.0   0.00039       1.4     122     189 ..     286     353 ..     242     365 .. 0.81
   3 !    9.1   0.0   0.00019      0.67     328     366 ..     610     648 ..     579     651 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.67
  Actin_micro 25 kekeryaaYrkdedrvlivvvedkliise..kevetddyfyks..elnkeeeeglieegkiakn 84
                 ++k+ y  Y k +d+++i    d    ++   ++  +d+  ++  + ++eee+g+ e++++ k+
   EPX71319.1 28 NQKNFYTDYLKRDDQMYIWR--DTANAKDgePDTTIGDVKQEDskKAAEEEEDGMEENTQEGKQ 89
                 66777888888888888865..444443300334445555443113445566666666655554 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.00039
  Actin_micro 122 slvfkdtlnrseilalvdlflnisgfkGilllPesLalclglgiqsaiviseyekhttvslveDyvll 189
                   ++ +d++ r  i  + dl+   ++f    +  esL   +g g++sa v++   ++t vs ve  +++
   EPX71319.1 286 VFIVPDLYDRIYIERFLDLLFYDLQFGKSAIVQESLCTSFGAGMSSACVVDVGAEKTSVSCVEEGIVI 353
                  47889*************999888886666666********************999******987665 PP

  == domain 3  score: 9.1 bits;  conditional E-value: 0.00019
  Actin_micro 328 ssilrgakvlkelevsKelWlTDkEWnsvrlRvLKeKvL 366
                   ++++g  ++++l +  e W+   +W++ + RvL  K L
   EPX71319.1 610 IIAWKGGCIYNRLRIVSEFWIKTSDWKTLGSRVLQYKTL 648
                  5689******************************99987 PP

>> PilM_2  Type IV pilus assembly protein PilM;
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.012        42     180     217 ..     330     369 ..     313     382 .. 0.80
   2 !    9.4   0.0   0.00013      0.48     238     300 ..     527     589 ..     516     597 .. 0.93

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.012
      PilM_2 180 kvvaivdigasrttlsvlrdgkivYtr..eqafGgeqltq 217
                 +  ++vd+ga++t++s +++g ++ +   ++++Gg+ +t 
  EPX71319.1 330 SSACVVDVGAEKTSVSCVEEGIVIPNSriNMKYGGDDVTL 369
                 4679****************99986432367788888775 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00013
      PilM_2 238 slPedyeeevlepflealaqeisralqffltssqqnkvdkilLaGGtaslpgleelleeelgi 300
                  +Pe  +e+++ p  +a+ q i  a +  l    +n    il+ GG a +pg+++llee+l+ 
  EPX71319.1 527 AYPERIKEKLIYPLDDAINQSIFSACEGNLGDQAKNLYSSILIVGGGALFPGFSHLLEERLQS 589
                 57999999****************************************************986 PP

>> FtsA  Cell division protein FtsA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       1.3   4.6e+03      23      38 ..      94     109 ..      86     200 .. 0.70
   2 !   10.9   0.0   0.00013      0.45       1      34 [.     333     368 ..     333     378 .. 0.89
   3 ?    1.9   0.0     0.083     3e+02      46      88 ..     510     589 ..     479     602 .. 0.73

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 1.3
                 EEEES--HHHHHHHHH CS
                 xxxxxxxxxxxxxxxx RF
        FtsA  23 lrvigvggngitkdia 38 
                 + vi vg+++++ ++a
  EPX71319.1  94 TVVIHVGSQNLRIGLA 109
                 6667777777666633 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00013
                 EEEEE-SSSEEEEEEETTEEEEEEEES-..-HHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxx RF
        FtsA   1 alvDiGagktdvavaedgalvhlrvigv..ggngit 34 
                 ++vD+Ga+kt+v+ +e+g ++  + i++  gg+ +t
  EPX71319.1 333 CVVDVGAEKTSVSCVEEGIVIPNSRINMkyGGDDVT 368
                 79****************999999998888999988 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.083
                 HHHHHHHH....HH--S--EEEEEHHHHH.................................GGGGSTTHHHHHHHHHT- CS
                 xxxxxxxx....xxxxxxxxxxxxxxxxx.................................xxxxxxxxxxxxxxxxxx RF
        FtsA  46 eeAeriki....kyGsalaekeigrkels.................................ggsalpnleelaeralsp 88 
                 ++A ++k+    + Gs+  +++i++k +                                  gg+  p++ +l+e+ l++
  EPX71319.1 510 DDANKVKKprvvHLGSLAYPERIKEKLIYplddainqsifsacegnlgdqaknlyssilivgGGALFPGFSHLLEERLQS 589
                 4555555333334555555666665555588888888888899999999999999999999999********99999866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (654 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       805  (0.0448993); expected 358.6 (0.02)
Passed bias filter:                      549  (0.0306208); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.69u 0.31s 00:00:01.00 Elapsed: 00:00:00.49
# Mc/sec: 4040.63
//
Query:       EPX71320.1  [L=496]
Description: RNA polymerase II associated Paf1 complex [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-98  330.9   5.4    1.2e-98  330.9   5.4    2.0  2  Paf1            Paf1
  ------ inclusion threshold ------
        0.2   11.5   6.4       0.44   10.4   6.4    1.5  1  Velvet          Velvet factor
          4    6.8  24.4        6.2    6.1  24.4    1.2  1  SDA1            SDA1
        7.7    6.5   7.1         39    4.2   5.6    2.3  2  Neur_chan_memb  Neurotransmitter-gated ion-channel transmembr
        9.8    6.4  19.2         20    5.4  19.2    1.5  1  DUF3807         Protein of unknown function (DUF3807)


Domain annotation for each model (and alignments):
>> Paf1  Paf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  330.9   5.4  3.3e-102   1.2e-98       1     420 [.       7     427 ..       7     428 .. 0.85
   2 ?   -3.9  17.0       1.4   5.1e+03     353     415 ..     413     456 ..     400     477 .. 0.31

  Alignments for each domain:
  == domain 1  score: 330.9 bits;  conditional E-value: 3.3e-102
        Paf1   1 dliarirYsNnLPdppfdpKflkypfeperfveyk.sssLerelkheiltdadlGmpldLinidgyldgdeesn....epvkLdpkDrkLLedeeaska 94 
                 d+i+r+rY+N+LP+ppf+p+++++ +  ++++ ++  s++++e+k+ i+ da+lGmp+dL  +dg+++gd++++    + ++Ldp+Dr+LL+ +    +
  EPX71320.1   7 DYILRVRYHNPLPPPPFPPRLINISNPVKQYALPNfVSNVVQEKKISIENDAELGMPMDLAAVDGFFEGDTSWMqsdmSGMNLDPADRALLKVA----G 101
                 8**********************************************************************999********************....3 PP

        Paf1  95 sskrskqhskkVswLRrTEYistefnrfgvsatdkqetklgknlkk..keqeedlyrdresqikaiektFedakkplkdlkHpskknlkaVealpllPD 191
                     s +++ +V++LRrTEYis+e+ r + +   + + +l+ + +k  +eq+ ++ r+ +sqi+ai++tF+++k+pl++lkHp+k++lk+V a+++lP+
  EPX71320.1 102 G---SGSSHVEVPFLRRTEYISSEVGRNTST---RGNLRLTASTSKaiAEQRGRSLREIPSQIQAIDQTFSAVKEPLQNLKHPTKPDLKPVAAWNILPN 194
                 3...34567***************6666644...3444444444444689************************************************* PP

        Paf1 192 felwknpyaqvkfdgdpatdskekdlkeeeq.kerlsqaiirpvmeeegeefvayflpteetlekrkrdleeeideeedeeyefklaReYnwkvenkas 289
                  ++   +++++++ ++ ++++ + +++e++  ++r++ a+++p  ++ege++++y+lp+eet ek ++  +   ++++++ + ++l+R+++ +++ ++ 
  EPX71320.1 195 DSMAGIQHLMLRVSDNLTDRAPTPSINEDDSvSKRHNVALFMP-SSAEGEQYLSYYLPSEETAEKVLEASN--SSSTTKGPFLYNLFRNFDATMHVNP- 289
                 *******************99999988877779**********.9*********************85433..3455579**************6655. PP

        Paf1 290 kgyee.nlllvfrdd..kkkavyYneletrveLrkrRkkeeee.skkdklvvklrelneeelkarekresefdpleeekeeeeeeeeeeeee...ksee 381
                 +g+e+ +l l+++++  +++++ Y++++ r++L++r+++++ + +++d ++++lre+n+ee  + +++++e +++++e++  +ee+e +ee+   ++e 
  EPX71320.1 290 SGLEDiCLSLHTDKEnpENNKALYTPIYARSTLKRRHVRAPINpDTIDGIELRLREINKEEGVQLKRARYESFAMGDEEALVKEEQEVAEEQakeEDEL 388
                 5****9999999998999*********************887889*********************************554444444444443212444 PP

        Paf1 382 eeekeeekeeaeeeseaeseeessdeeeeeakselkess 420
                 +e   ++++++++    e+ +e+++++++++++e+ke++
  EPX71320.1 389 NETGMQQQDSNTQPPPVENAQEQEQSSSPSGQNEEKEKE 427
                 444555555555556666666666666777777766665 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 1.4
        Paf1 353 resefdpleeekeeeeeeeeeeeeekseeeeekeeekeeaeeeseaeseeessdeeeeeakse 415
                  +s + + +eeke             +e+ +e+++++e +++e++++s +es++      +++
  EPX71320.1 413 QSSSPSGQNEEKE-------------KEDGDEQNRQSETVNNENSKSSLDESTN------STN 456
                 1111111111111.............1111111122222222222222222222......111 PP

>> Velvet  Velvet factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   6.4   0.00012      0.44       9     148 ..     315     456 ..     312     477 .. 0.51

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00012
                 --EEE---SS-S-----BS--E..EEEEEEETTT-SB--GGG---TTEEEEEEEEETTSSSB--EE--.---------....----------------- CS
      Velvet   9 PkrARmCgfgdkdrrpidPppv..vqLrvtdaetnsevdveeldssffvvtvdLwsedgtkevnlvkssssasssiss...easssssqsseesssspk 102
                 P+ AR        r pi+P  +  ++Lr+++ ++++ v+++++++++f +  + + ++ ++e  + +++++++ ++++   +++ s++q+++ ++ +++
  EPX71320.1 315 PIYARSTLKRRHVRAPINPDTIdgIELRLREINKEEGVQLKRARYESFAMGDEEALVKEEQE--VAEEQAKEEDELNEtgmQQQDSNTQPPPVEN-AQE 410
                 788885444444999****99988*************************9854333333333..3223333333333322211111222111111.222 PP

                 -----------------------------------------EESEE CS
      Velvet 103 sqassaessapsssaapsaqeekekkeatlssssnqasskltrnLi 148
                 +++ss++s +++++++++  e+++++e+ ++++s+++ ++ t++  
  EPX71320.1 411 QEQSSSPSGQNEEKEKEDGDEQNRQSETVNNENSKSSLDESTNSTN 456
                 2222222222222222222222233333333333333344444444 PP

>> SDA1  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1  24.4    0.0017       6.2      68     198 ..     334     472 ..     328     484 .. 0.50

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0017
        SDA1  68 egieGle.Llekwkeeekkekre...............eeeedsddeddeedwevesdddseedseggwidvesdeeeieesdesedeeeeeeeeeeke 150
                 + i+G+e  l ++++ee+ + ++               +ee++  +e+ +e++e+++   +++ds+++   ve+ +e++++s+ s + ee+e+ e+++e
  EPX71320.1 334 DTIDGIElRLREINKEEGVQLKRaryesfamgdeealvKEEQEVAEEQAKEEDELNETGMQQQDSNTQPPPVENAQEQEQSSSPSGQNEEKEK-EDGDE 431
                 5799***64666666666554446999999877777765555555555555555555555567777776677666664333333333332222.22222 PP

        SDA1 151 ekeeeeeeeeeeeeeeeeeeeeeekekkkkkakeaseeekkkekeeek 198
                 +++++e+ +       +e+++++ +e++++++ +++++e++  ++++k
  EPX71320.1 432 QNRQSETVN-------NENSKSSLDESTNSTNGDHQNQEEPVLDPADK 472
                 222222222.......11111112222222333333344444444333 PP

>> Neur_chan_memb  Neurotransmitter-gated ion-channel transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0     0.086   3.1e+02      13      26 ..     245     259 ..     244     260 .. 0.90
   2 ?    4.2   5.6     0.011        39     122     175 ..     384     440 ..     296     484 .. 0.50

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.086
                     HHHHHHHHCT.TTHH CS
  Neur_chan_memb  13 vlvFyLpsda.gekv 26 
                      l++yLps+  +ekv
      EPX71320.1 245 YLSYYLPSEEtAEKV 259
                     59********99998 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.011
                     ....................--------------------------------------SS---TTGGG--... CS
  Neur_chan_memb 122 l...................ssgasseaeelilskskseskkaklseeqgsekastckckckegeeaspstql 175
                     +                   +                ++ +++++s+++++++++++k + +e++++s +t++
      EPX71320.1 384 EedelnetgmqqqdsntqppP---------------VENAQEQEQSSSPSGQNEEKEKEDGDEQNRQS-ETVN 440
                     122221112111111111110...............11122222222222222222221111111111.1111 PP

>> DUF3807  Protein of unknown function (DUF3807)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4  19.2    0.0055        20      70     169 ..     372     461 ..     341     475 .. 0.44

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0055
     DUF3807  70 Rereleeeesekekkeeeeeeedkeaadkessqeseeqekkkkskkkskkkkkrakkakekkekkeekkidlrkrtwdkvdkglasldyddeeeeeqks 168
                 +e          ++ +ee+++e++e +++  +q++++++ +  +++++++++++   ++e+kek++  +++ r++++ + +++ +sld+++++++ +++
  EPX71320.1 372 KEE---------QEVAEEQAKEEDELNETGMQQQDSNTQPPPVENAQEQEQSSSPSGQNEEKEKEDG-DEQNRQSETVNNENSKSSLDESTNSTNGDHQ 460
                 222.........2222223333333333222222222222222222222222222222222222222.2233333333347777788877777666655 PP

     DUF3807 169 a 169
                 +
  EPX71320.1 461 N 461
                 4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (496 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1741  (0.0971052); expected 358.6 (0.02)
Passed bias filter:                      609  (0.0339673); expected 358.6 (0.02)
Passed Vit filter:                       120  (0.00669307); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.80u 0.36s 00:00:01.16 Elapsed: 00:00:00.52
# Mc/sec: 2860.07
//
Query:       EPX71321.1  [L=140]
Description: 40S ribosomal protein S16 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.9e-31  109.1   0.5    2.1e-31  108.9   0.5    1.0  1  Ribosomal_S9  Ribosomal protein S9/S16


Domain annotation for each model (and alignments):
>> Ribosomal_S9  Ribosomal protein S9/S16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.9   0.5   1.2e-35   2.1e-31       1     121 []       8     140 .]       8     140 .] 0.91

  Alignments for each domain:
  == domain 1  score: 108.9 bits;  conditional E-value: 1.2e-35
                   EECTTEEEEEEEEESSSEEEETTEECCHHSTTSCHHHHHCHHHHHTTTSS..SEEEEEEEESS-HHHHHHHHHHHHHHHHHHHHH.....HHHHHHC CS
  Ribosomal_S9   1 GrrKesvArvwikegkgkilvngksleeYfkeeaarekvleplkltgllg..kfdvfvkvkgGGlsgqaeAirlgiaraLvalek.....eekkeLk 90 
                   G++ +++A +++k+gkg i+vng +l+  ++ e  r+kv+ep+ ++g  +   +d++v+v+gGG+++q++Air++i++a+va+++     ++k eLk
    EPX71321.1   8 GKKGNATAVAHCKAGKGLIKVNGAPLSL-VQPEILRMKVYEPILVAGADKfaGVDIRVRVSGGGHVSQIYAIRQAISKAIVAYYQkfvdeHSKAELK 103
                   8999************************.877**************9987645******************************98788753377777 PP

                   ......TCCCTS-B--------TTSSCTTB----S-- CS
  Ribosomal_S9  91 ......kaglltrDpRvvErkKtgkkkARkkyqwskR 121
                         +++ll++DpR++E+kK+g ++AR++ q+s+R
    EPX71321.1 104 kalvtyDRTLLVADPRRMEPKKFGGHGARARQQKSYR 140
                   5555888****************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       480  (0.0267723); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.45
# Mc/sec: 944.75
//
Query:       EPX71322.1  [L=208]
Description: 60S ribosomal protein L13 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.9e-79  263.7   3.8    9.7e-79  263.4   3.8    1.1  1  Ribosomal_L13e  Ribosomal protein L13e


Domain annotation for each model (and alignments):
>> Ribosomal_L13e  Ribosomal protein L13e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  263.4   3.8   5.4e-83   9.7e-79       1     179 [.       8     183 ..       8     184 .. 0.96

  Alignments for each domain:
  == domain 1  score: 263.4 bits;  conditional E-value: 5.4e-83
  Ribosomal_L13e   1 vipnnhfrKdwqrrvktwfdqparkkrRrearqakaakvaprpvekLrPvVrcptvrYntkvraGrGFtleElkaagiskklArtiGIavDhRrk 95 
                     ++pn+hfrKdwqr+vktwfdqp+rk +Rr+arq+kaak+aprpve+LrP+V+ pt+rYn+k+raGrGFtleElkaag+s+++A+tiGI vDhRr+
      EPX71322.1   8 QLPNAHFRKDWQRYVKTWFDQPGRKLHRRQARQTKAAKIAPRPVEALRPAVKPPTIRYNMKIRAGRGFTLEELKAAGVSRRVAPTIGIPVDHRRR 102
                     69********************************************************************************************* PP

  Ribosomal_L13e  96 nkseeslkaNveRLkeYkskLilfprkakkpkkgdaskeelkaakqvkvaavlpikkeakkekaraiteeekkfkayrtlrkar 179
                     n+seesl++NveRLk+Y ++Li+fprka++pkkgda++  ++ akq++++av+pi++e + e+a+ ite+ kkf+a++tl ++r
      EPX71322.1 103 NRSEESLQRNVERLKAYLAHLIVFPRKAGQPKKGDATD--VSGAKQTDASAVFPITQE-AVEEAKPITEDAKKFQAFNTLTNER 183
                     ***********************************988..889999999******965.5568899**************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       742  (0.0413855); expected 358.6 (0.02)
Passed bias filter:                      378  (0.0210832); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.28s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 1452.72
//
Query:       EPX71323.1  [L=250]
Description: 60S ribosomal protein L7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.5e-19   70.0  16.1      4e-19   68.6  11.6    2.4  2  Ribosomal_L30_N  Ribosomal L30 N-terminal domain
    1.5e-17   63.2   1.1    4.9e-17   61.6   0.5    2.3  2  Ribosomal_L30    Ribosomal protein L30p/L7e
  ------ inclusion threshold ------
       0.11   12.9   0.1        2.9    8.4   0.0    3.1  3  IMS_HHH          IMS family HHH motif


Domain annotation for each model (and alignments):
>> Ribosomal_L30_N  Ribosomal L30 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.6  11.6   6.6e-23     4e-19       2      70 ..      16      84 ..      15      86 .. 0.97
   2 ?    3.2   0.1     0.017     1e+02      32      45 ..     217     230 ..     213     232 .. 0.86

  Alignments for each domain:
  == domain 1  score: 68.6 bits;  conditional E-value: 6.6e-23
  Ribosomal_L30_N  2 PEsllKKrkrneklkakrakkaaakkkankkkrklifkRaekYvkEYrqkereeirlkReAkkaGnfyv 70
                     PE +lKKrk ne+++ +r ++a++kkka  kk+++ifkRae++vk Yr+ ere  rlkR Akk G   v
       EPX71323.1 16 PEVILKKRKVNERTRLERVEAALEKKKALSKKKNIIFKRAESFVKNYRDGERERLRLKRVAKKTGAALV 84
                     9****************************************************************8777 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.017
  Ribosomal_L30_N  32 kkrklifkRaekYv 45 
                       kr+li k+a++Y 
       EPX71323.1 217 IKRSLIEKKAKHYN 230
                      69***********6 PP

>> Ribosomal_L30  Ribosomal protein L30p/L7e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.6   0.5   8.2e-21   4.9e-17       1      51 []      91     141 ..      91     141 .. 0.98
   2 ?   -2.6   0.0      0.87   5.2e+03      44      51 .]     148     155 ..     146     155 .. 0.89

  Alignments for each domain:
  == domain 1  score: 61.6 bits;  conditional E-value: 8.2e-21
                    EEEEE-S-STTS-HHHHHHHHHTT-SSTT.EEEE--SSHHHHHHHHHCCCGE CS
  Ribosomal_L30   1 lfVtrirsiigvppkvrktLqlLgLrkin.gtvvklntpsirGmLkkVkhlV 51 
                    lf +r+ ++ +vppk rk+LqlL+L+ in g+++++n+ + + mLk+V+++V
     EPX71323.1  91 LFCIRVAGVRNVPPKARKVLQLLRLTSINnGVFIRNNKSTAN-MLKLVEPYV 141
                    699***************************************.********9 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.87
                    HHHCCCGE CS
  Ribosomal_L30  44 LkkVkhlV 51 
                    Lk+V++l+
     EPX71323.1 148 LKSVRELI 155
                    89***998 PP

>> IMS_HHH  IMS family HHH motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.15   8.8e+02       3      18 ..     150     165 ..     149     165 .. 0.89
   2 ?   -3.1   0.0       2.2   1.3e+04       4      13 ..     176     185 ..     176     188 .. 0.71
   3 ?    8.4   0.0   0.00049       2.9       3      16 ..     204     217 ..     203     219 .. 0.90

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.15
     IMS_HHH   3 dvkefLwplpitkipG 18 
                 +v+e+++++ ++ki G
  EPX71323.1 150 SVRELIYKRGFGKIKG 165
                 799********99987 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 2.2
     IMS_HHH   4 vkefLwplpi 13 
                 v+e L++l++
  EPX71323.1 176 VEEALGKLDV 185
                 5678888887 PP

  == domain 3  score: 8.4 bits;  conditional E-value: 0.00049
     IMS_HHH   3 dvkefLwplpitki 16 
                 +v++fLwp+++t+i
  EPX71323.1 204 EVSSFLWPFKLTSI 217
                 799*********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       912  (0.0508673); expected 358.6 (0.02)
Passed bias filter:                      517  (0.028836); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 1721.46
//
Query:       EPX71324.1  [L=432]
Description: checkpoint clamp complex protein Rad9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-91  306.8   6.7    1.3e-91  306.5   6.7    1.1  1  Rad9      Rad9


Domain annotation for each model (and alignments):
>> Rad9  Rad9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  306.5   6.7   7.1e-96   1.3e-91       1     250 []      13     300 ..      13     300 .. 0.99

  Alignments for each domain:
  == domain 1  score: 306.5 bits;  conditional E-value: 7.1e-96
        Rad9   1 laralqclsrigdelyleisedglelrtvnssrSayalvtlkksfFdky.........ekevseqirckilvKsvlsvfr................... 71 
                 l+r++ +lsri+d++++ei++d+l l+t+nssrS+++ vtl+k+fFdk+         +  vs+++r+++++K++ls+fr                   
  EPX71324.1  13 LSRIFLNLSRIDDAVNWEINKDQLILTTLNSSRSGFGKVTLTKKFFDKFtfhpdtlflTGFVSPTVRLSTQIKPILSIFRnkifestllvnnnlntnag 111
                 79************************************************************************************************* PP

        Rad9  72 ...slsakektvekvkisi.dekksrlivqllCkhgvkkthkisledseslkavfdkettpsklriksrvLsdllehfsssleeitielakervllksy 166
                    s s+k++ ve+++++i + k++r+i+++ Ckhgv kt+ki++e++++l+avfdk++++++++i+s++L+dl+ehf +++ee+ti++ ++rvll+s+
  EPX71324.1 112 aaeSSSKKNVVVENIQMQItSGKECRVIFKFNCKHGVVKTYKIAYEQTQTLHAVFDKASCHNNWQINSKILKDLIEHFGQKTEELTIQPVQGRVLLTSF 210
                 ***99**************999***************************************************************************** PP

        Rad9 167 eeeekdn....kkalstelsideeeFeqyqlaedveitlslkefkallvfaeslsaslslafdeaGkPllltik..klslleakfilaTl 250
                 +ee+ +n    k++++t++sid +eFeq++l+e++ itlslkef+a++++aesl +s++ ++++ GkP+l+t++  k++++ea+filaT+
  EPX71324.1 211 TEEVVHNkdvlKQPTQTTVSIDGKEFEQVSLNEGIIITLSLKEFRAAVLLAESLGTSIASYYSVSGKPALFTFNkgKFMEIEAQFILATV 300
                 *******888889*************************************************************999************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (432 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       507  (0.0282782); expected 358.6 (0.02)
Passed bias filter:                      324  (0.0180713); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 2992.44
//
Query:       EPX71325.1  [L=480]
Description: traub family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.1e-30  105.0   1.7    1.9e-29  102.0   0.6    2.9  2  TRAUB      Apoptosis-antagonizing transcription factor, C-ter
    4.3e-19   69.6   2.0    4.3e-19   69.6   2.0    3.5  3  AATF-Che1  Apoptosis antagonizing transcription factor
  ------ inclusion threshold ------
       0.41   10.1   2.7         24    4.3   0.3    3.0  3  DUF4400    Domain of unknown function (DUF4400)


Domain annotation for each model (and alignments):
>> TRAUB  Apoptosis-antagonizing transcription factor, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.0      0.21   1.3e+03      28      50 ..      37      59 ..      15      60 .. 0.64
   2 !  102.0   0.6   3.2e-33   1.9e-29       1      85 []     365     444 ..     365     444 .. 0.87

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.21
       TRAUB 28 alqklrkkkkkkkkvDtkaSKGR 50
                + ++ +k+  +++ vD  aSK R
  EPX71325.1 37 SSDNENKNAGREHYVDVGASKLR 59
                33444444444779******966 PP

  == domain 2  score: 102.0 bits;  conditional E-value: 3.2e-33
       TRAUB   1 YqqLLkelvekksaessaaasdsrqllalqklrkkkkkkkkvDtkaSKGRklrYevheklqNFmapeergkweeeqidelfasLl 85 
                 Yq+LLk++++++ a+s    +++++++a +   ++k+kk++vDtkaSKGRklrY+vheklqNFm+p+e ++w+ee+id+lf+sLl
  EPX71325.1 365 YQSLLKDFINSRLADSGR--DTNVRWVASK---QQKQKKENVDTKASKGRKLRYHVHEKLQNFMVPVEVRSWPEEHIDDLFNSLL 444
                 9************88874..4557886544...44444468*******************************************8 PP

>> AATF-Che1  Apoptosis antagonizing transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   4.0         3   1.8e+04      86      87 ..     109     120 ..      69     170 .. 0.48
   2 !   69.6   2.0   7.2e-23   4.3e-19       1     139 []     180     305 ..     180     305 .. 0.84
   3 ?   -1.3   2.9      0.53   3.2e+03      86     106 ..     355     414 ..     309     472 .. 0.55

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 3
   AATF-Che1  86 a..........e 87 
                            e
  EPX71325.1 109 GedvsegvsgdE 120
                 022334433331 PP

  == domain 2  score: 69.6 bits;  conditional E-value: 7.2e-23
   AATF-Che1   1 DaeKGkaVknQlklwDslLelRIklQkaltaanqLpqpetlkefles..seefeealeeaekalkklleslleLreelleqneikklaeskeeeekkks 97 
                 D++KG a ++Q++l+D++L++RI+lQk +t+a +  ++e  ++ +++  ++e     ++++++l +++++ +eLr +l+ ++ i          e  + 
  EPX71325.1 180 DMKKGVALQEQMRLYDRVLDTRIRLQKGFTQAHTVNTSEGNQDNVSNdqADESVVSTDDVKNSLLSFIQKTMELRVDLMVDSGI----------EPRGL 268
                 89**********************************8887777777655556667779********************333332..........33344 PP

   AATF-Che1  98 krkrkkkkkeetsleelwkeleklekalkpfrnatldkWseK 139
                 krk+     ++++le++ + +++l+++l+ + n+tl+kW+++
  EPX71325.1 269 KRKA-----DSEDLESILSTMNNLDDSLEDWKNNTLTKWHSR 305
                 5555.....35789*************************986 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 0.53
   AATF-Che1  86 a.......................................eskeeeekkkskrkrkkkkk 106
                 +                                       ++k+e+ ++k+++ rk + +
  EPX71325.1 355 NpdlyddtefyqsllkdfinsrladsgrdtnvrwvaskqqKQKKENVDTKASKGRKLRYH 414
                 044555555555555555555555555555444444443333333333333333333333 PP

>> DUF4400  Domain of unknown function (DUF4400)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.3     0.004        24      10      81 ..     159     226 ..     152     253 .. 0.69
   2 ?    2.4   0.0     0.015        91      50     108 ..     257     314 ..     227     318 .. 0.79
   3 ?    1.9   0.0     0.023   1.4e+02      42      91 ..     368     417 ..     358     428 .. 0.74

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.004
     DUF4400  10 aqavlrtElgylsaeftrslllgepaaetaterantayewlfvks..Gllewlqalkqsasssgtns..laksvse 81 
                 ++++l++E + ls ++ rs  +++ +   a +   ++y+ +  ++   l++ + ++++ + s+g++         +
  EPX71325.1 159 LKKMLHGE-QRLS-DKIRSSAVQDMKKGVALQEQMRLYDRV-LDTriRLQKGFTQAHTVNTSEGNQDnvS-----N 226
                 689*****.9999.889999999988888888888888776.5552377788888877777777655322.....2 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.015
     DUF4400  50 lfvksGllewlqalkqsasssgtnslaksvseg.refsaalselvasleeyleaavyvvl 108
                 l+v+sG++   + lk +a+s+  +s+ +++++   +++++ +++ ++ +++++aa  +++
  EPX71325.1 257 LMVDSGIE--PRGLKRKADSEDLESILSTMNNLdDSLEDWKNNTLTKWHSRVQAAQGITQ 314
                 56999999..56677777788888888999999999*****************9988876 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.023
     DUF4400  42 rantayewlfvksGllewlqalkqsasssgtnslaksvsegrefsaalse 91 
                 + + + ++   +sG    ++++++++++++++++ +++s+gr++++ ++e
  EPX71325.1 368 LLKDFINSRLADSGRDTNVRWVASKQQKQKKENVDTKASKGRKLRYHVHE 417
                 55666667778999999999999999999999988888888888875333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (480 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1455  (0.0811534); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.46
# Mc/sec: 3127.41
//
Query:       EPX71326.1  [L=339]
Description: chromodomain protein Swi6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.3e-18   66.0   0.1    3.2e-17   62.3   0.1    2.3  2  Chromo_shadow  Chromo shadow domain
    9.8e-14   51.0   0.5    9.8e-14   51.0   0.5    2.4  2  Chromo         Chromo (CHRromatin Organisation MOdifier) doma


Domain annotation for each model (and alignments):
>> Chromo_shadow  Chromo shadow domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0     0.044     4e+02      12      50 ..     108     148 ..      95     149 .. 0.67
   2 !   62.3   0.1   3.6e-21   3.2e-17       2      53 .]     280     335 ..     279     335 .. 0.98

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.044
                    TS-EEEEEEETT.S-EEE.EEHHHHHHH.SHHHHHHHHHCT CS
  Chromo_shadow  12 sgelmflikWkn.gekaelvpskeanqk.cPqkvikFYEer 50 
                     g   +l+kW++ ++ ++   s+ea +  c  +v ++ Eer
     EPX71326.1 108 GGGYEYLLKWEGyDDPSDNTWSTEADCDgCKDLVVAYWEER 148
                    45677899999955555566677777666777777777776 PP

  == domain 2  score: 62.3 bits;  conditional E-value: 3.6e-21
                    TTTTEEEEEE.....TS-EEEEEEETTS-EEE.EEHHHHHHHSHHHHHHHHHCT-XX CS
  Chromo_shadow   2 pekiigavdt.....sgelmflikWkngekaelvpskeanqkcPqkvikFYEerltw 53 
                    +e+++ ++dt     +g l ++++Wkng  +   ps++ n+kcPqk+++FYE++lt+
     EPX71326.1 280 WEELVASIDTierkdDGTLEIYLTWKNGAVSH-YPSSITNKKCPQKMLQFYESHLTF 335
                    ********************************.**********************98 PP

>> Chromo  Chromo (CHRromatin Organisation MOdifier) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.0   0.5   1.1e-17   9.8e-14       1      53 [.      94     146 ..      94     147 .. 0.94
   2 ?   -1.1   0.4      0.21   1.9e+03      31      36 ..     277     282 ..     274     303 .. 0.78

  Alignments for each domain:
  == domain 1  score: 51.0 bits;  conditional E-value: 1.1e-17
                 EEEEEEEEEEEETTEECEEEEEEETTSTG.GGTEEEEGGGCSSHSHHHHHHHHH CS
      Chromo   1 yeVerIidhrtdkdgleleYlVKWkglpy.sentWEpeenlekcfqelideFkk 53 
                 y+Ve++++hr  + g+++eYl KW+g+++ s+ntW +e++++ c ++l+ ++++
  EPX71326.1  94 YVVEKVLKHRLARRGGGYEYLLKWEGYDDpSDNTWSTEADCDGC-KDLVVAYWE 146
                 89********9999999***********98999***********.999999997 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.21
                 GTEEEE CS
      Chromo  31 entWEp 36 
                 ++tWE+
  EPX71326.1 277 YDTWEE 282
                 789997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (339 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1231  (0.0686597); expected 358.6 (0.02)
Passed bias filter:                      521  (0.0290591); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.32s 00:00:00.90 Elapsed: 00:00:00.47
# Mc/sec: 2177.35
//
Query:       EPX71327.1  [L=321]
Description: GTPase activating protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-40  137.8   0.3      3e-40  137.0   0.3    1.5  1  ArfGap    Putative GTPase activating protein for Arf


Domain annotation for each model (and alignments):
>> ArfGap  Putative GTPase activating protein for Arf
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.0   0.3   1.7e-44     3e-40       4     114 ..      14     121 ..      11     124 .. 0.95

  Alignments for each domain:
  == domain 1  score: 137.0 bits;  conditional E-value: 1.7e-44
                 HHHHCCSCCCCB-TTT.-SBS--EEETTTTEEE-HHHHHHHCCS.TTT--EEETTTS---HHHHHHHHHTCHHHHHHHHTTTC-TTTSG-TTCGHHHHH CS
      ArfGap   4 lkellkepenkvCaDC.gakeptWaslnlgvflCieCsgvHrslgvhiskvrsltldkwedeelellkalgNkkaneileaklpkeekrskssskekre 101
                 lk+ll+ep+nkvCaDC ++++p+Was++lgvf+Ci+Csg+Hrslgvhis+v+s++ld w+de+ e ++++gN++an ++eakl + + +    s++k+ 
  EPX71327.1  14 LKSLLREPANKVCADCkRNEQPRWASWSLGVFICIRCSGIHRSLGVHISRVKSVDLDAWTDEQTENMRRWGNQRANMYWEAKLADGHAP----SDSKVL 108
                 7899************88999**************************************************************999888....9999** PP

                 HHHHHHHTCHTTC CS
      ArfGap 102 efirakYeekkfa 114
                 +fir+kYe +k++
  EPX71327.1 109 TFIRTKYELRKWV 121
                 *********9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       721  (0.0402142); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.28s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 2192.61
//
Query:       EPX71328.1  [L=446]
Description: AP-2 adaptor complex subunit Apm4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.7e-76  256.4   0.1    4.1e-76  255.8   0.1    1.3  1  Adap_comp_sub   Adaptor complexes medium subunit family
      1e-13   51.4   0.2    1.9e-13   50.6   0.2    1.5  1  Clat_adaptor_s  Clathrin adaptor complex small chain


Domain annotation for each model (and alignments):
>> Adap_comp_sub  Adaptor complexes medium subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  255.8   0.1   4.6e-80   4.1e-76       1     263 [.     167     445 ..     167     446 .] 0.96

  Alignments for each domain:
  == domain 1  score: 255.8 bits;  conditional E-value: 4.6e-80
                    XXXXXXXXXXXX-EEEEEEEEEEEEEE-TTS-EEEEEEEEEEEEEE---TT-EEEEEE-SS-EE...................--S.SEESEEEEE CS
  Adap_comp_sub   1 iswrrkgikykkneiyldviErvsvlvdkkGkilksevqGtiacksklsgmpelklgLndklnk...................ekk.ielddvsfH 76 
                    ++wrr+giky++n iyldv+Er+++l++++G++l+s+++G +++++ lsgmpe+++gL+dkl+                     ++ i l+d++fH
     EPX71328.1 167 VPWRRAGIKYRNNTIYLDVVERLNLLISSTGNVLRSDISGSVHMRALLSGMPECQFGLSDKLDYklkynddrknflrsqndsaASEgITLEDCQFH 262
                    69*************************************************************9****************9985558********* PP

                    TT-B-TTHHHH-EEEE---SEEEEEEEEEES--SS--SEEEEEEEEE-TTTSEEEEEEEEEE-S-TT-EEEEEEEEEE--TT-EEEEEEESSTT-E CS
  Adap_comp_sub  77 qcVnldkfeservisFiPpdgeftLmrYrlsannvklPfsvkpkvklsgdevrveielklkenfkkkltlenvkisiplpkevsnlaiktskGkak 172
                    qcV l++fe+er+isFiPpdge++Lm+Yr+ ++n+ +Pf++ p+v++ ++  ++ +++ +++ +++kl  + +k++ip+p++v +++ ++++Gk  
     EPX71328.1 263 QCVMLPEFENERKISFIPPDGEVELMSYRC-HENIHVPFRIHPIVEQLSK-QKLIYRISIRSSYPHKL-STSLKLRIPVPENVVKANPRVNRGKSG 355
                    ******************************.***************9766.9************8766.678************************ PP

                    EEEETTEEEEEE--EETT-EE..EEEEEEE--------------.EEEEEEEET--SS---EEEEEEE--..-----EEEEEEEEEEEEEEE- CS
  Adap_comp_sub 173 ynpeenaleWtikklpggnesslsgeleleaesekkeenprdgklvsveFkipgftaSgikVeslkveer..esykpfkwvryvtvsgeyeir 263
                    y+p+en++ W+i+   g+++ +l +e+el++++  +++ +++++ +s++F+i++f+ Sg+kV++l v+e+  ++yk++kwvry t++g++eir
     EPX71328.1 356 YQPSENIISWNIPYYLGEMDLILYAEVELSSTT--NQQHWSRPP-ISLDFNIQMFASSGLKVKYLHVQEPsnSKYKSIKWVRYATRAGTCEIR 445
                    ***************************999998..677777788.**********************************************98 PP

>> Clat_adaptor_s  Clathrin adaptor complex small chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.6   0.2   2.1e-17   1.9e-13       1     136 [.       1     133 [.       1     139 [. 0.82

  Alignments for each domain:
  == domain 1  score: 50.6 bits;  conditional E-value: 2.1e-17
                     -EEEEEEE-TTS-EEEEEESSSS-CHHHHHHHHHHHHHHHTT-SSS.-SEEEETTEEEEEEEETTEEEEEEEETTS-HHHHHHHHHHHHHHHHHH CS
  Clat_adaptor_s   1 mikaililnkkgkvrlakfytavddkkkqklieevyelvsaRdskl.sniveledlkviYkryasLYFvvivdeqeneliilelihlfvesLdky 94 
                     mi  ++ +n kg+  + + y +  + +    + +v+++    +++l + i+ +  +   Y r  +LY v + + + n +i+le +++++e+L++y
      EPX71328.1   1 MISGVFFFNLKGDNVICRTYRHDLKRH----VTDVIRIHVLANPELrTPIATFGSTSYAYVRHEDLYIVTVAKGNPNVIILLEFLERLIEVLSRY 91 
                     677788899999999998886543333....344444333333443377889999999************************************* PP

                     CTS-SHHHHHHCHHHHHHHHHCCEETTEES---HHHHHHCHH CS
  Clat_adaptor_s  95 fgnVceldlvfnfekvylildEivsgGeiletskkevlkrve 136
                     f +V+e  + +nf  +y +ldE+v+ G ++ t+++ + ++++
      EPX71328.1  92 FDKVNESSIKENFAFIYELLDEMVDFGIVQMTEPHALARNLT 133
                     ********************************9998877776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (446 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       456  (0.0254337); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.22s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 3153.08
//
Query:       EPX71329.1  [L=161]
Description: ribosomal protein subunit L23 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      2e-14   53.7   0.1      4e-14   52.7   0.0    1.5  2  Ribosomal_L23  Ribosomal protein L23
  ------ inclusion threshold ------
      0.037   13.8   0.0      0.084   12.6   0.0    1.6  1  Arg_repressor  Arginine repressor, DNA binding domain


Domain annotation for each model (and alignments):
>> Ribosomal_L23  Ribosomal protein L23
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.7   0.0   4.5e-18     4e-14      21      80 ..      30      90 ..      22      93 .. 0.89
   2 ?   -3.3   0.0       1.4   1.2e+04      31      40 ..     128     137 ..     122     143 .. 0.55

  Alignments for each domain:
  == domain 1  score: 52.7 bits;  conditional E-value: 4.5e-18
                   EEEEE-SS-THHHHHHHHHHHHT--EEEEEEEEE--EBESSSSS..EEBE--EEEEEEEESS CS
  Ribosomal_L23 21 yvFeVakdanKleikkaveklFgVkVekVntlnvkgkkkrvgrk..vgrrksyKkaiVtLke 80
                   ++F+V++++nK+++++++ +++++kV +V+t +++gk  r + +  v r++++K+aiV+++e
     EPX71329.1 30 AAFRVPLNVNKFDVRDYLLHVYNLKVLSVKTNIYQGKLYRDE-YgrVRREQATKRAIVEMEE 90
                   78*************************************843.3358899**********54 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.4
                    HHHHHHHHHH CS
  Ribosomal_L23  31 Kleikkavek 40 
                    K+++k+  e+
     EPX71329.1 128 KPDMKSVNEE 137
                    5555554444 PP

>> Arg_repressor  Arginine repressor, DNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   9.4e-06     0.084      12      48 ..     124     160 ..     116     161 .] 0.87

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 9.4e-06
                    HHHHHS---SHHHHHHHHHTTT----HHHHHHHHHHH CS
  Arg_repressor  12 kiikeekissQkelvelLkeeGidvtQatvSRdLkel 48 
                    k++++ +++s +e  ++Lk++G+   Q ++SR Lk +
     EPX71329.1 124 KVLEKPDMKSVNEELNKLKDAGFSTSQQKISRLLKSI 160
                    6788888889899999******************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       603  (0.0336327); expected 358.6 (0.02)
Passed bias filter:                      501  (0.0279436); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1142.84
//
Query:       EPX71330.1  [L=865]
Description: ATP-dependent RNA helicase Dbp10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-51  173.5   0.2    9.9e-51  172.0   0.0    1.8  2  DEAD        DEAD/DEAH box helicase
      3e-25   88.7   0.0    1.9e-22   79.7   0.0    3.2  3  Helicase_C  Helicase conserved C-terminal domain
      1e-19   70.5   0.8    3.1e-19   69.0   0.8    1.9  1  DBP10CT     DBP10CT (NUC160) domain


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  172.0   0.0   1.7e-54   9.9e-51       1     173 [.     101     266 ..     101     269 .. 0.97
   2 ?   -1.7   0.0      0.35   2.1e+03      48     104 ..     355     411 ..     305     415 .. 0.63

  Alignments for each domain:
  == domain 1  score: 172.0 bits;  conditional E-value: 1.7e-54
                 -HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   1 tdiQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvd 99 
                 t+iQ+++ipl+l+g+dv++ a+TGsGKT+af+ip+++++ +t  ++g++a+i++P+reLa qt++ +k f k +dlrv +i+ggv+ ++q s + +++d
  EPX71330.1 101 TPIQRKTIPLVLEGRDVVGMARTGSGKTAAFVIPMIERLKSTLAQSGTRAIILSPSRELALQTMRVVKDFNKGADLRVAAIVGGVSLEEQFSIMTSKPD 199
                 89*************************************999999999**********************************************999** PP

                 EEEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 100 ivvgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkdv 173
                 i+++tpgr+++l  + kl+l+ v+++V+DEadrl ++gf  ++ +il+ l       +++rq++++SATlp+++
  EPX71330.1 200 IIIATPGRFMHLKVEMKLELNAVEYVVFDEADRLFEMGFAAQLTEILHDL-------PSSRQTLLFSATLPRTL 266
                 ***********99899**********************************.......67899*********765 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.35
                 -EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEET...TSSHHHHHHHHHTT.CSEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxx.xxxxxxx RF
        DEAD  48 pkalivePtreLaeqtlnnlkkfkkyidlrvlliig...gvaardqlskldng.vdivvgt 104
                   +l+ +Pt+  +e + n l   +      v+ i+g   ++a+++q+++++ g ++++v t
  EPX71330.1 355 DATLVFVPTKHHVEYISNLLVLAGY----AVSTIYGsldQDARTNQINNFRLGyTNVLVVT 411
                 5677888887776666555543333....44555554436777777777776667777766 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.5   0.0    0.0072        43       7      62 ..     140     197 ..     132     206 .. 0.74
   2 ?    1.3   0.0      0.07   4.2e+02      35      67 ..     319     350 ..     293     353 .. 0.76
   3 !   79.7   0.0   3.2e-26   1.9e-22      10     111 .]     345     449 ..     336     449 .. 0.88

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.0072
                 HHHHHHTTTTSEEEEEESSHH.HHHH...HHHHHHHTTSTEEEESTTSTHHHHHHHHHHH CS
  Helicase_C   7 lellkleeeggkilifvntid.rlek...vklllekkgikvavlhgelpqnereeileqf 62 
                 +   +l ++g +++i +++++  l+    vk +++  +++va++ g  + +e+  i+++ 
  EPX71330.1 140 KS--TLAQSGTRAIILSPSRElALQTmrvVKDFNKGADLRVAAIVGGVSLEEQFSIMTSK 197
                 33..45899************85544445666654449**************99999875 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.07
                 HHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSS CS
  Helicase_C  35 llekkgikvavlhgelpqnereeileqfnkges 67 
                    k++ik +v  ++ + ++r++i+e+ n+g++
  EPX71330.1 319 T-LKRDIKPVVSMSSENPKKRKRIMEAVNQGKY 350
                 3.34468888888889999***********997 PP

  == domain 3  score: 79.7 bits;  conditional E-value: 3.2e-26
                 H...HHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHHHHHHHT CS
  Helicase_C  10 l...kleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvtsyiqriG 105
                 +   k + + + +l+fv+t+ ++e ++ ll   g+ v +++g+l q+ r   +++f+ g ++vL+ tdva+rGidip + +V+n+d+p +++ +++r+G
  EPX71330.1 345 VnqgKYSGSSDATLVFVPTKHHVEYISNLLVLAGYAVSTIYGSLDQDARTNQINNFRLGYTNVLVVTDVAARGIDIPLLANVVNYDFPPQPKVFVHRVG 443
                 4455666778899**********7655555666****************************************************************** PP

                 TSSSTT CS
  Helicase_C 106 RtgRag 111
                 Rt+Rag
  EPX71330.1 444 RTARAG 449
                 ****97 PP

>> DBP10CT  DBP10CT (NUC160) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.0   0.8   5.2e-23   3.1e-19       1      64 [.     714     776 ..     714     777 .. 0.84

  Alignments for each domain:
  == domain 1  score: 69.0 bits;  conditional E-value: 5.2e-23
     DBP10CT   1 DLtgDeaeelkkkkqakk..lrWDkKkkkyVkrtnkdedgsk...kirtESGvkiaasfksgrYdkWkk 64 
                 DLt+D++     + q+++   rWD Kkkk+V+++n dedgs+   +ir+ESGvk++a+++sgr+++Wk 
  EPX71330.1 714 DLTTDDG-----FSQTNSggQRWDPKKKKFVNTRN-DEDGSRgvkIIRGESGVKLPATYRSGRFEAWKS 776
                 99*****.....3444444458**********999.999974444**********************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (865 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       557  (0.031067); expected 358.6 (0.02)
Passed bias filter:                      299  (0.0166769); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.64u 0.33s 00:00:00.97 Elapsed: 00:00:00.49
# Mc/sec: 5345.34
//
Query:       EPX71331.1  [L=531]
Description: ATP synthase complex assembly protein Atp25 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-12   47.6   0.0    4.9e-12   46.2   0.0    1.8  1  RsfS      Ribosomal silencing factor during starvation
  ------ inclusion threshold ------
      0.042   14.8   0.1       0.14   13.1   0.1    2.0  1  HHH_9     HHH domain
       0.23   11.6   3.2        6.1    7.0   0.0    3.6  4  PPR_3     Pentatricopeptide repeat domain


Domain annotation for each model (and alignments):
>> RsfS  Ribosomal silencing factor during starvation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.2   0.0   8.2e-16   4.9e-12       2      97 ..      95     219 ..      94     220 .. 0.85

  Alignments for each domain:
  == domain 1  score: 46.2 bits;  conditional E-value: 8.2e-16
                 HHHHHHHHTT-E.EEEEEE-TT.TTBSS-SEEEEEEESSHHHHHHHHHHHHHHHHHC.C-.--EEECB.T........................TS.SE CS
        RsfS   2 eiaealedkkae.divvidlre.kkssladymviatakserhlkalaeelekklkeeaae.alsveGl.n........................egddW 72 
                 e+++al+++    d+++i  ++ +  s +d+m+++t++ + h+ ++++ +++klk+  +  +++++Gl n                        ++++W
  EPX71331.1  95 EVLKALSNQYLVsDLKFIRPNAdQPWSTSDLMLLGTCNDDGHVISVTRGISQKLKDL-KIgTVQIQGLpNlsrqrilnrralkrpeawhnkmstQKTNW 192
                 7889999998888*****77774456777*************************976.224678888853667788888888889999999998899** PP

                 EEEE-S..SEEEEEEECCCHHHHHHHH CS
        RsfS  73 vlvdlg..dvvVhllteeaReeydLEe 97 
                 ++++ +  +v++hl+t+eaRe+y+LE+
  EPX71331.1 193 TCIHPEnyNVIIHLFTKEAREFYQLET 219
                 ****99899*****************7 PP

>> HHH_9  HHH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   2.4e-05      0.14       6      48 ..     193     235 ..     191     252 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 2.4e-05
       HHH_9   6 TavHPEsYalakkllkklgldlkeligeeallkkldkkklaee 48 
                 T +HPE+Y+++ +l++k   +  +l + ++ l+++ +++ ++e
  EPX71331.1 193 TCIHPENYNVIIHLFTKEAREFYQLETIDQDLQQILSENHENE 235
                 88**************999999999888888888877776665 PP

>> PPR_3  Pentatricopeptide repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.54   3.2e+03      53      61 ..     200     208 ..     198     210 .. 0.78
   2 ?    0.0   0.0      0.16   9.3e+02      12      26 ..     321     335 ..     311     337 .. 0.82
   3 ?    1.6   0.1     0.051     3e+02      38      61 ..     407     430 ..     401     432 .. 0.72
   4 ?    7.0   0.0     0.001       6.1       7      40 ..     446     479 ..     443     486 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.54
       PPR_3  53 yNailgvig 61 
                 yN+i+ ++ 
  EPX71331.1 200 YNVIIHLFT 208
                 999998885 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.16
       PPR_3  12 kldvvtYthLLtaya 26 
                 +++v + ++LLta+a
  EPX71331.1 321 EVSVQDVNTLLTAVA 335
                 8999********987 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.051
       PPR_3  38 lermkkkgikPtvvtyNailgvig 61 
                  + m   gi+ tv +y  il+v+ 
  EPX71331.1 407 EQLMYRHGISMTVKSYMLILNVFA 430
                 566777888888888888888874 PP

  == domain 4  score: 7.0 bits;  conditional E-value: 0.001
       PPR_3   7 erkgikldvvtYthLLtayanagnkklalevler 40 
                  + gi ld  +Y h+ +++a  +n+++a + l  
  EPX71331.1 446 TNIGILLDEDMYCHIFRLVAESKNERAAIYALSN 479
                 5678999999*****************9886655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (531 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1086  (0.0605723); expected 358.6 (0.02)
Passed bias filter:                      598  (0.0333538); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.73u 0.39s 00:00:01.12 Elapsed: 00:00:00.58
# Mc/sec: 2745.18
//
Query:       EPX71332.1  [L=1602]
Description: adherin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.9e-35  122.5   8.9    2.8e-35  122.0   3.4    3.4  2  Nipped-B_C    Sister chromatid cohesion C-terminus
      3e-06   27.4   0.6      3e-06   27.4   0.6    4.1  4  Cohesin_HEAT  HEAT repeat associated with sister chromatid co
      0.003   17.6   0.6      0.003   17.6   0.6    4.5  6  Cnd1          non-SMC mitotic condensation complex subunit 1
     0.0089   16.2   2.8        3.5    8.2   0.0    4.9  5  HEAT          HEAT repeat
  ------ inclusion threshold ------
      0.071   12.6   0.0       0.17   11.4   0.0    1.5  1  TM140         TM140 protein family


Domain annotation for each model (and alignments):
>> Nipped-B_C  Sister chromatid cohesion C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.3     0.063   2.3e+02      52      96 ..     862     905 ..     817    1010 .. 0.58
   2 !  122.0   3.4   7.7e-39   2.8e-35       2     189 ..    1299    1479 ..    1298    1480 .. 0.94

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.063
                 HTT-SSHHHHHHHHHHHHHHHHHSHHHHHHTHHHHHHHHHHHHHH CS
  Nipped-B_C  52 letdpdesirsrAdkllqeleekyegfleskalqgirlafqlqkk 96 
                   +d++ s+r+rA+k+l ++ e  +  ++ +   +i+l  ++  +
  EPX71332.1 862 GVSDSSVSVRKRAIKQLADIYEVTS-SINIRCDICIKLLSRMNDE 905
                 4466888888999988888876444.3455555555555555555 PP

  == domain 2  score: 122.0 bits;  conditional E-value: 7.7e-39
                  HHHHHHHHHHHHHHHTSS-HHHHHHHHHHHHHHHHHT-S-GGGTHHHHHHHTT-SSHHHHHHHHHHHHHHHHHSHHHHHHTHHHHHHHHHHHHHH.. CS
  Nipped-B_C    2 savvqrYlkdilecalspdsqvrlaAlevvslilrqGLvhPvqcvptLialetdpdesirsrAdkllqeleekyegfleskalqgirlafqlqkkia 98  
                  + ++q+Yl++il++++s++ + +l+Ale+++ i++qGL++P  c+p+++ale+ + +++++  ++l++el +k+e++++  ++q+++l+f  ++   
  EPX71332.1 1299 ACLMQKYLSNILDSCFSKELSFALLALEILQHIIHQGLANPRLCFPVIVALEATEVKEVKQVVINLHTELLQKHESLVDGLYAQAASLMFSSKSF-- 1393
                  579****************************************************************************************9999.. PP

                  .H-TTTG.......GG---HHHHHHHHH..--SHHHHHHHHHHHHHHH.HHTSSTT--HHHHHHHHHHHHHHHHCS--EEHHHHHHHHHHH.. CS
  Nipped-B_C   99 sssgaklrrsasetesptallsslysll..rsnkqsrrkflsslvklfdfesesdaesekshlsfllfladnLahfpYqtqdEvlyvihhidr 189 
                    ++         t + t+ ++ +y+++  ++n +srrkf+ +++kl++ e  + a+ +++++ f  f++  +  ++Y ++dE+l++++ id+
  EPX71332.1 1394 -PENYVC------TIEDTSAFQDMYNVVlsTKNTRSRRKFIMQMLKLLEHENGNLANISHEKILFFNFCCSAMGGIKYLSLDEPLMILQVIDT 1479
                  .777766......467899999****77689999**************87666678999********************************97 PP

>> Cohesin_HEAT  HEAT repeat associated with sister chromatid cohesion
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   0.6   8.3e-10     3e-06       1      42 []     800     841 ..     800     841 .. 0.98
   2 ?    3.6   0.5     0.023        83      23      36 ..     859     872 ..     859     876 .. 0.82
   3 ?   -0.1   0.0      0.33   1.2e+03       6      24 ..    1213    1231 ..    1211    1235 .. 0.82
   4 ?   -3.8   0.1       4.9   1.8e+04      10      21 ..    1574    1585 ..    1574    1585 .. 0.84

  Alignments for each domain:
  == domain 1  score: 27.4 bits;  conditional E-value: 8.3e-10
                   HHHHHHHHH-GGGGGSHHHHHHHHHHHHSS-HHHHHHHHHHH CS
  Cohesin_HEAT   1 kalsslvekdpsiLsapevldtiarrltDsspsVRdAaLell 42 
                   +++s++ +++  + ++pevl++++++  D+s+ VRd++L+ll
    EPX71332.1 800 RIISQMKSIPAILHAHPEVLSQVISKVADPSAFVRDTVLDLL 841
                   79***************************************8 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.023
                   HHHHHHSS-HHHHH CS
  Cohesin_HEAT  23 iarrltDsspsVRd 36 
                   +a+  +Dss+sVR+
    EPX71332.1 859 VAAGVSDSSVSVRK 872
                   678899*******8 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.33
                    HHHH-GGGGGSHHHHHHHH CS
  Cohesin_HEAT    6 lvekdpsiLsapevldtia 24  
                    ++ + p++ ++p++l+++ 
    EPX71332.1 1213 VALAQPTLFTSPKLLNILD 1231
                    67899*********99985 PP

  == domain 4  score: -3.8 bits;  conditional E-value: 4.9
                    -GGGGGSHHHHH CS
  Cohesin_HEAT   10 dpsiLsapevld 21  
                    d++i ++p+v+d
    EPX71332.1 1574 DENISTDPIVKD 1585
                    789999999986 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.3      0.54   1.9e+03      72     127 ..     293     362 ..     273     364 .. 0.65
   2 ?   -2.3   0.2       1.1     4e+03      59     103 ..     592     646 ..     579     653 .. 0.56
   3 !   17.6   0.6   8.4e-07     0.003       2      89 ..     833     924 ..     798     995 .. 0.88
   4 ?   -0.9   0.0       0.4   1.4e+03      93     148 ..    1083    1136 ..    1062    1147 .. 0.70
   5 ?   -2.7   0.3       1.5   5.4e+03      49     140 ..    1216    1266 ..    1180    1284 .. 0.51
   6 ?   -2.5   0.1       1.3   4.6e+03      54      71 ..    1421    1438 ..    1353    1451 .. 0.61

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.54
        Cnd1  72 prVvanalaalteisek....senaiynllpdiisklsdalne..........csewgqitilefLlsyi 127
                 +++ +++l +l  +++     ++++iy+ +  +++++s   +e           +e+++  il++L s i
  EPX71332.1 293 KMILESSLKSLDSVNDSvedaDDDLIYSKVDYLLKNISLIFQElytlpsfkklQNEESFLFILDTLHSLI 362
                 5777777777777777655444566777776667777664444555555666689999999999998776 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 1.1
        Cnd1  59 flselakll.....eDenprVvanalaalteisekse.....naiynllpdiisk 103
                 +l++l+++l       +++ V++ al++++ i ++++     n+++  ++ i++k
  EPX71332.1 592 MLEDLLNMLtvpewVGTETLVRQFALNLIMMIVKEKNsvttkNTALDFFSVIVNK 646
                 5555555553333334567788888888888888743122224444444444444 PP

  == domain 3  score: 17.6 bits;  conditional E-value: 8.4e-07
        Cnd1   2 iRalairtlg..cirvpnlveylvepLrkrLkDedpyVRktaaivvakL..ilndmvkekgflselaklleDenprVvanalaalteiseks 89 
                 +R  ++  l+  ++ ++++v +l   + ++++D++  VRk a+  +a +  ++  + +  ++  +l++ ++De++++ +++l+ l  ++ ++
  EPX71332.1 833 VRDTVLDLLStyMMDFKETVNQLYVFVAAGVSDSSVSVRKRAIKQLADIyeVTSSINIRCDICIKLLSRMNDEEENITELSLHTLDSLWFNN 924
                 77788888888899***********************************766677777778************************9999776 PP

  == domain 4  score: -0.9 bits;  conditional E-value: 0.4
        Cnd1   93 iynllpdiisklsdalnecsewgqitilefLlsyipkdkqeaeslveklcprlqha 148 
                  + nl  +++++l  +  +++ ++ i  l +Lls+ ++d++   +++   +  l+ +
  EPX71332.1 1083 LRNLEATMFQRLT-KAGSATLKEMIPCLCYLLSHLNDDQR-LYKIIGSCIRTLEET 1136
                  3455566677777.56889999999999999999999998.888877777666655 PP

  == domain 5  score: -2.7 bits;  conditional E-value: 1.5
        Cnd1   49 ilndmvkekgflselaklleDenprVvanalaalteiseksenaiynllpdiisklsdalnecsewgqitilefLlsyipkdkqeaeslvek 140 
                   +++++ + ++l+ l k+ e+++   v+    ++ e++  +e++i +                                            k
  EPX71332.1 1216 AQPTLFTSPKLLNILDKIFEENSVDCVSVIFRSFLELLAADEDLITEADE-----------------------------------------K 1266
                  33334444444444444444444444444444444444444444444333.........................................3 PP

  == domain 6  score: -2.5 bits;  conditional E-value: 1.3
        Cnd1   54 vkekgflselaklleDen 71  
                     ++f+ +++klle en
  EPX71332.1 1421 RSRRKFIMQMLKLLEHEN 1438
                  223334444444444444 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       3.3   1.2e+04      14      28 ..     610     624 ..     608     625 .. 0.81
   2 ?    4.3   0.0     0.016        59       3      25 ..     820     842 ..     818     845 .. 0.80
   3 !    8.2   0.0   0.00096       3.5       6      30 ..     860     884 ..     855     885 .. 0.86
   4 ?   -2.0   0.0       1.8   6.4e+03       5      24 ..     953     972 ..     951     977 .. 0.73
   5 ?   -2.8   0.1       3.2   1.1e+04       2      17 ..    1106    1121 ..    1105    1122 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 3.3
                 HHHHHHHHHHHHHHH CS
        HEAT  14 peVReaAakaLgala 28 
                   VR+ A++ +  ++
  EPX71332.1 610 TLVRQFALNLIMMIV 624
                 579*****9998887 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.016
                 HHHHHHHT-SSHHHHHHHHHHHH CS
        HEAT   3 PlllkllsDpspeVReaAakaLg 25 
                   +++   Dps++VR++++  L 
  EPX71332.1 820 SQVISKVADPSAFVRDTVLDLLS 842
                 55666678**********99886 PP

  == domain 3  score: 8.2 bits;  conditional E-value: 0.00096
                 HHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   6 lkllsDpspeVReaAakaLgalaev 30 
                     sD+s +VR+ A+k L++++ev
  EPX71332.1 860 AAGVSDSSVSVRKRAIKQLADIYEV 884
                 45579*****************986 PP

  == domain 4  score: -2.0 bits;  conditional E-value: 1.8
                 HHHHHT-SSHHHHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAakaL 24 
                 llkl sDp p    + + +L
  EPX71332.1 953 LLKLSSDPTPALHVSLVTTL 972
                 89999***998666666555 PP

  == domain 5  score: -2.8 bits;  conditional E-value: 3.2
                  HHHHHHHHT-SSHHHH CS
        HEAT    2 lPlllkllsDpspeVR 17  
                  +P+l+ lls+ + ++R
  EPX71332.1 1106 IPCLCYLLSHLNDDQR 1121
                  7899999998877777 PP

>> TM140  TM140 protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   4.7e-05      0.17      20      49 ..    1427    1456 ..    1420    1464 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 4.7e-05
       TM140   20 isllfyallwkaGnlvdlpnlriGfynfCl 49  
                  i+ ++  l  ++Gnl+++++ +i f+nfC 
  EPX71332.1 1427 IMQMLKLLEHENGNLANISHEKILFFNFCC 1456
                  56677778899******************5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1602 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       768  (0.0428356); expected 358.6 (0.02)
Passed bias filter:                      457  (0.0254894); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.95u 0.28s 00:00:01.23 Elapsed: 00:00:00.48
# Mc/sec: 10085.52
//
Query:       EPX71333.1  [L=194]
Description: 20S proteasome component beta 4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-37  127.7   0.0    4.2e-37  127.5   0.0    1.0  1  Proteasome  Proteasome subunit


Domain annotation for each model (and alignments):
>> Proteasome  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.5   0.0   2.3e-41   4.2e-37       7     189 ..       4     183 ..       2     184 .. 0.96

  Alignments for each domain:
  == domain 1  score: 127.5 bits;  conditional E-value: 2.3e-41
                 EEEEEETTEEEEEEEEEEEETTEEEESSSSTSEEEEETTEEEEEEESHHHHHHHHHHHHHHHHHHHHHHSSGTCHHHHHHHHHHHHHHHHHHCTTTTTS CS
  Proteasome   7 vvGikgkdgvvlaadkratagskllskstveKifkiddhigvafaGlaaDartlvrraraeaqlyrlrygrpipverlvarvaaklqaytqrsgrrpfg 105
                  ++++gkd+++ a+   a +g ++l++ + +K  +++ h ++ ++G+a+D+ +++++++a+++ly lr++  +++e ++a++++k++a+ +rs r+p++
  EPX71333.1   4 LLAVQGKDFILTASSGSAVRGITVLKSGD-DKSEQLNSHNLMLYCGEAGDTSNFAEYISANINLYTLRNNLILSPE-ATASFTRKQLATSLRS-RKPYM 99 
                 69**************************8.**********************************************.9999999999999999.99*** PP

                 EEEEEEEEE.TTTEEEEEEEETTSEEEEESSEEEESTTHHHHHHHHHHHHSTTBSHHHHHHHHHHHHHHHHHHBTTSCSSEEEEE CS
  Proteasome 106 vslliagvd.eeggpeLyqidpsGsyieekdavaiGsgseaaktalekeykedltleeavelavkalkealerdklsgknievav 189
                 v+ll+ag+d e++ p+Ly+id+ +++++  ++++ G+ s ++ +++++ yk+dl+l++a+++++ +  e+ +r+ +  k++ + v
  EPX71333.1 100 VNLLLAGYDtEKEVPQLYWIDYLATCVRV-PYACQGYSSFYCLSLFDRYYKPDLSLDDAIHIMKLCFDELQKRMPIDYKGFICKV 183
                 *********88888***************.6*****99************************************99999987776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       373  (0.0208043); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.30s 00:00:00.74 Elapsed: 00:00:00.45
# Mc/sec: 1298.21
//
Query:       EPX71334.1  [L=214]
Description: ribosomal protein subunit L11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.028   14.6   0.0      0.059   13.5   0.0    1.6  1  Ribosomal_L10  Ribosomal protein L10


Domain annotation for each model (and alignments):
>> Ribosomal_L10  Ribosomal protein L10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   3.3e-06     0.059       5      82 ..      20     125 ..      16     136 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 3.3e-06
                    CHCCCCCCCCCCCTTSSEEEEEE-TTS-HHHHHHCCCHHHHH..GCEEEEESCCCCCCCCHCCTSS........................S...SC CS
  Ribosomal_L10   5 kKeelvkelkellkkyksvvvvdyegltvaqlqelRkklren..gaelkvvKntlmrrAleetgee.......................ek...lk 72 
                    +K  l ++   ll+++ ++++ + ++l  ++  ++R++l+++  +a lk++  +++r Al   +                              ++
     EPX71334.1  20 RKSVLHSQYVSLLQQSPNFLLLQHNNLLPSESRNFRNELKKHapDASLKIISGSIFRHALHVYESMpkgadgsvdlsaantvashknakRIkldID 115
                    57777788899****************************99999****************987776777777777777777666655441044477 PP

                    GCCSSSEEEE CS
  Ribosomal_L10  73 ellkgpvalv 82 
                    +l++gp a++
     EPX71334.1 116 DLFAGPLAVF 125
                    7777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       305  (0.0170115); expected 358.6 (0.02)
Passed bias filter:                      277  (0.0154498); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.47
# Mc/sec: 1364.59
//
Query:       EPX71335.1  [L=126]
Description: tRNA (guanine-N2-)-methyltransferase regulatory subunit Trm112 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-18   65.7   0.1    5.3e-18   65.4   0.1    1.1  1  Trm112p   Trm112p-like protein
     0.0023   17.9   0.1     0.0049   16.8   0.1    1.5  1  DUF5637   Family of unknown function (DUF5637)


Domain annotation for each model (and alignments):
>> Trm112p  Trm112p-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.4   0.1   5.9e-22   5.3e-18       1      68 []       2     115 ..       2     115 .. 0.98

  Alignments for each domain:
  == domain 1  score: 65.4 bits;  conditional E-value: 5.9e-22
                 BTGGCCC-B-TTTHH........C-..........................-HHHHHHHHH.TT---S-SS----S............CHHTTEECCCC CS
     Trm112p   1 kllllniLaCpackg........pL..........................dwealvevaa.lglnelpkekpedy............ellleldieeg 52 
                 kll+ n+L+C+ +k+        pL                          dw+al+  ++ lg+n+lp+ekpe              ++lle++i+e 
  EPX71335.1   2 KLLTVNFLTCS-NKScsstaeafPLkiedaklaiqqmelkpeflrniiprvDWNALLISTRqLGNNSLPEEKPELTeesdevllkslhNVLLETEITEA 99 
                 789********.***********999999999********************************************************99********* PP

                 EEEETTTTEEEEEETT CS
     Trm112p  53 eLvCpncgraYpIkdG 68 
                 +++C ncg++Yp+ +G
  EPX71335.1 100 KMTCGNCGHIYPVFEG 115
                 *************998 PP

>> DUF5637  Family of unknown function (DUF5637)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.1   5.5e-07    0.0049      10      25 ..      97     112 ..      95     116 .. 0.89

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 5.5e-07
     DUF5637  10 tdPklCCgNCGClyPv 25 
                 t+ k  CgNCG +yPv
  EPX71335.1  97 TEAKMTCGNCGHIYPV 112
                 677999*********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       650  (0.0362541); expected 358.6 (0.02)
Passed bias filter:                      514  (0.0286686); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.41
# Mc/sec: 919.42
//
Query:       EPX71336.1  [L=402]
Description: translation initiation factor eIF3m [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.9e-12   46.6   0.1    3.9e-12   46.6   0.1    2.5  4  PCI            PCI domain
    2.3e-10   39.9   0.1    5.1e-10   38.9   0.1    1.6  1  eIF3m_C_helix  eIF3 subunit M, C-terminal helix


Domain annotation for each model (and alignments):
>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.2      0.26   2.3e+03      25      40 ..      35      54 ..      12     124 .. 0.62
   2 ?   -2.4   0.0      0.75   6.8e+03      74      74 ..     125     125 ..      78     155 .. 0.55
   3 ?   -2.6   0.0      0.87   7.8e+03      21      21 ..     190     190 ..     148     224 .. 0.56
   4 !   46.6   0.1   4.4e-16   3.9e-12       4     105 .]     244     344 ..     241     344 .. 0.96

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.26
                H....HHHHHHHTTHHHHHH CS
         PCI 25 l....eeelladdglaqlle 40
                +    ++e+la +++++ l+
  EPX71336.1 35 NvfekCKEFLASENVNETLS 54
                13333333333333333322 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.75
                 H CS
         PCI  74 v 74 
                  
  EPX71336.1 125 I 125
                 1 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 0.87
                 H CS
         PCI  21 e 21 
                 e
  EPX71336.1 190 E 190
                 1 PP

  == domain 4  score: 46.6 bits;  conditional E-value: 4.4e-16
                 HHHHHHHHHTSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH..CESEEEHHHHHHHHTSSHHHHHHHHHHHHHTTSSSEEEETTTTE CS
         PCI   4 sdllkalrsgnlsgfseelkdleeelladdglaqllesLekkvrerllrqvsk..iyssislerlaklldlsvdevEkilvklIrdgeirakidqesgi 100
                  +ll +l  g +++f ++   + + ++++++  q  e   +k+++ ++ +++   + + +s++++ak l+ +++evE +++++Ir g+++++++q +++
  EPX71336.1 244 LQLLGILSGGMIEDFLSWIDTN-RSYCEQEKFDQ--EAITRKMKLLTIASLATqaPNNVLSYKDIAKVLQTDESEVELWIIDVIRAGLVEGRMSQLNQT 339
                 68999999999***********.***********..****************9********************************************** PP

                 EEECS CS
         PCI 101 vvfkk 105
                 +v+++
  EPX71336.1 340 FVIHR 344
                 **985 PP

>> eIF3m_C_helix  eIF3 subunit M, C-terminal helix
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.9   0.1   5.7e-14   5.1e-10       1      29 []     348     376 ..     348     376 .. 0.99

  Alignments for each domain:
  == domain 1  score: 38.9 bits;  conditional E-value: 5.7e-14
  eIF3m_C_helix   1 RvFGkeQWqeLetrLdaWksnLanVleVi 29 
                    RvFGk++W +L++rL+ W s+L+ +l+V+
     EPX71336.1 348 RVFGKHEWISLHERLAKWSSSLQYMLQVM 376
                    9***************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (402 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1018  (0.0567795); expected 358.6 (0.02)
Passed bias filter:                      606  (0.0338); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.28s 00:00:00.85 Elapsed: 00:00:00.46
# Mc/sec: 2625.94
//
Query:       EPX71337.1  [L=93]
Description: ribosomal protein subunit S19 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      1e-26   92.6   0.0    1.2e-26   92.4   0.0    1.1  1  Ribosomal_S19  Ribosomal protein S19


Domain annotation for each model (and alignments):
>> Ribosomal_S19  Ribosomal protein S19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.4   0.0   6.6e-31   1.2e-26       1      80 [.      10      86 ..      10      87 .. 0.92

  Alignments for each domain:
  == domain 1  score: 92.4 bits;  conditional E-value: 6.6e-31
                   .HHHSSTTCCCHHHHHHHHHHTS-----EEES-TT-B--GGGTT-EEEEE-SSSEEEEE--CCCTTSBCGGGT-SS---- CS
  Ribosomal_S19  1 rslkkgpfvqesllkkvrkakaekkkevikthsRdstIlPemvgltvgVynGktfvpveikeemvGhkLgEFspTrkpvk 80
                   rs++kgp v +  ++  ++ k   +++++kt++R+ tIlP mvg ++ V+nGk++  v+++e+m+GhkLgEF+pTrk ++
     EPX71337.1 10 RSIWKGPNVVDFGVDLGEAIK---SQTPVKTMVRSATILPRMVGAQFLVHNGKNYASVNVTEDMIGHKLGEFAPTRKAFH 86
                   799***999988888666666...6899*************************************************886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       247  (0.0137766); expected 358.6 (0.02)
Passed bias filter:                      225  (0.0125495); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.25s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 695.83
//
Query:       EPX71338.1  [L=111]
Description: hypothetical protein SOCG_01557 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
        5.6    5.7   7.1        5.5    5.7   7.1    1.0  1  ALMT           Aluminium activated malate transporter


Domain annotation for each model (and alignments):
>> ALMT  Aluminium activated malate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   7.1   0.00031       5.5     310     386 ..      35     108 ..       4     111 .] 0.58

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.00031
        ALMT 310 lrelaesvkkmkklskveellkevkvaaeeLqskldskskLlvnsekweaakkkekaeeveekkeeekeseskkeea 386
                 ++++++++ k+  +s+ ++l + +++ a eL  ++  kskL+++ e+++a+ ++  + e+  +k+e+k+++skk+++
  EPX71338.1  35 VQKKGKKKGKKFAESS-DDLHQILNKVAYELDDRI--KSKLQLAHEREAAMGSSVASAESAPSKKETKKKDSKKDKK 108
                 3333333333333333.455555555555555555..5667888888777777777777766666666666666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1604  (0.089464); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.28s 00:00:00.68 Elapsed: 00:00:00.43
# Mc/sec: 771.11
//
Query:       EPX71339.1  [L=70]
Description: hypothetical protein SOCG_06063 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       463  (0.0258241); expected 358.6 (0.02)
Passed bias filter:                      246  (0.0137208); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.26s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 520.80
//
Query:       EPX71340.1  [L=794]
Description: gluconate transporter inducer Gti1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-60  204.7   0.0    3.9e-60  203.0   0.0    1.9  1  Gti1_Pac2  Gti1/Pac2 family
  ------ inclusion threshold ------
      0.014   14.9   0.7      0.014   14.9   0.7    2.7  3  CAP_N      Adenylate cyclase associated (CAP) N terminal


Domain annotation for each model (and alignments):
>> Gti1_Pac2  Gti1/Pac2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  203.0   0.0   4.4e-64   3.9e-60       1     181 []      20     366 ..      20     366 .. 0.84

  Alignments for each domain:
  == domain 1  score: 203.0 bits;  conditional E-value: 4.4e-64
                 SEES---SHHHHHHHHHHHHTTSS---SS---HHHHHHHSSTTEEEEEEHHHH--SS---S--B---EEETTEEEEEB--------------..----- CS
   Gti1_Pac2   1 tfkgyiettkdalllieavlegilkrvtrRlkekErkeliksGsvFvfeeeesgikRWTDGvsWSpSrilgnfLvYreldkkrakkkkkkkk..kkske 97 
                 +f gy+ tt dal+l++a+++++l+ ++rR++++Erk++i+sG+vF+f+e++sgikRWTDGv+WSpSr++gnfL+Yr+l  +++++++k ++  +++ +
  EPX71340.1  20 SFFGYVGTTLDALWLFQACQQNVLPFTPRRPQREERKHIIHSGNVFIFNETQSGIKRWTDGVHWSPSRVIGNFLIYRQLGTSSSNSNEKVDTtkAATGK 118
                 599****************************************************************************55554444444330033333 PP

                 ------------....................................................................................... CS
   Gti1_Pac2  98 stkkeeskseka......sssssess......................................................................... 117
                 +t+++   ++++      s                                                                                
  EPX71340.1 119 RTDESGGPNQTSpesnfpS------Appppppphhlsheshpsipiddvfsdsnisvnhpsqssnplstaasnpstlpaksdfpptylqdparflstss 211
                 3333333222223444450......15555555555555566677777777777777777778888889999999999999999999999999999999 PP

                 ................................................................................................... CS
   Gti1_Pac2 118 ...........................................................................................eakessss 125
                                                                                                             +++s+s 
  EPX71340.1 212 asvhpiptqssdplfshhnnlaptststtgptpipsagedikpytggassvlasgqnypdtlsrsfpsfpatsnppaplqpqypmkrrlsvPSSTSTSL 310
                 9999*************************************************************************************8533333333 PP

                 .---.-------------------------------EEEEEEEEEETTTEEEEEEE- CS
   Gti1_Pac2 126 sesk.asksskslekdserslvgsltdsykfkkdgLvKkTisvtlkgkelhlisYyk 181
                 s +    +s+ s+ +dser+lvgsl+d+y+fk++gLvKkTis+t++g+ +hlisYy+
  EPX71340.1 311 S-NGfPVNSALSYLHDSERALVGSLNDAYSFKEGGLVKKTISLTINGQLHHLISYYT 366
                 3.44599*************************************************6 PP

>> CAP_N  Adenylate cyclase associated (CAP) N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.7   1.5e-06     0.014     215     282 ..      77     164 ..      63     169 .. 0.58
   2 ?   -5.1   1.8       1.9   1.7e+04     242     257 ..     280     293 ..     253     311 .. 0.45
   3 ?   -8.4   8.3         2   1.8e+04     226     274 ..     473     523 ..     463     530 .. 0.56

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.5e-06
                 STTS----TT.....................SBE...................SSC--XXXXXXX.....XXXXXXXX.....XXXXXXXXXXXXXXXX CS
       CAP_N 215 httGltWnkk.....................Gkdaeealk............aaaaaasaaaagg.pppPpPpPppasvfeeesaaasasaaaggmsav 279
                 +t G+ W+++                                          ++  +++++++++ p +PpPpPpp  +       +++s+++  +++v
  EPX71340.1  77 WTDGVHWSPSrvignfliyrqlgtsssnsneK-------VdttkaatgkrtdESGGPNQTSPESNfPSAPPPPPPPHHL-------SHESHPSIPIDDV 161
                 57888888877888888888775555444432.......0334444566666333344444444435556666666644.......2345667777777 PP

                 XXX CS
       CAP_N 280 Fae 282
                 F++
  EPX71340.1 162 FSD 164
                 775 PP

  == domain 2  score: -5.1 bits;  conditional E-value: 1.9
                 XXXXX....XXXXXXX CS
       CAP_N 242 aaaggpppPpPpPppa 257
                  +a++ +pP+P  p +
  EPX71340.1 280 FPATS-NPPAPLQP-Q 293
                 22222.23333222.2 PP

  == domain 3  score: -8.4 bits;  conditional E-value: 2
                 BE.......SSC--XXXXXXX......XXXXXXXX.....XXXXXXXXXXX CS
       CAP_N 226 kdaeealkaaaaaasaaaaggppp..PpPpPppasvfeeesaaasasaaag 274
                 +++++  ++ +++++ +  g++p   P P  pp ++f++++  + ++++ +
  EPX71340.1 473 TSPSSLQQHPHPSSQLPLYGKSPNqmPNPDMPPIPTFSSHAPPHYSENPIP 523
                 455555544445555555555333456676677777777765555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (794 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       465  (0.0259356); expected 358.6 (0.02)
Passed bias filter:                      243  (0.0135535); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.29s 00:00:00.95 Elapsed: 00:00:00.43
# Mc/sec: 5529.54
//
Query:       EPX71341.1  [L=555]
Description: transcriptional corepressor Tup12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.8e-60  198.1  13.6    2.5e-09   37.6   0.4    7.7  7  WD40           WD domain, G-beta repeat
      8e-26   90.2   9.6    1.2e-25   89.6   9.6    1.3  1  Tup_N          Tup N-terminal
    3.9e-21   75.2   0.0    0.00016   21.9   0.0    6.6  7  ANAPC4_WD40    Anaphase-promoting complex subunit 4 WD40 doma
    3.5e-10   39.7   0.0    0.00044   19.7   0.0    4.5  5  WD40_like      WD40-like domain
    1.7e-09   37.1   0.1       0.54    9.2   0.0    6.4  6  Ge1_WD40       WD40 region of Ge1, enhancer of mRNA-decapping
    1.3e-07   31.4   2.0        8.5    6.4   0.0    7.3  8  PD40           WD40-like Beta Propeller Repeat
    9.7e-06   25.6   0.0      0.026   14.4   0.0    3.1  4  eIF2A          Eukaryotic translation initiation factor eIF2A
     0.0016   18.2   0.1        4.8    6.9   0.0    3.8  4  Gmad1          Lipoprotein LpqB beta-propeller domain
     0.0028   16.0   0.0        1.4    7.1   0.0    3.4  4  Frtz           WD repeat-containing and planar cell polarity 
  ------ inclusion threshold ------
       0.01   14.5   0.6        1.9    7.0   0.1    3.6  3  Nup160         Nucleoporin Nup120/160
      0.017   13.6   0.1       0.77    8.2   0.0    2.4  2  Cytochrom_D1   Cytochrome D1 heme domain
      0.051   13.5   0.0        5.3    7.0   0.0    3.6  4  nos_propeller  Nitrous oxide reductase propeller repeat
      0.059   12.1   2.2       0.49    9.1   0.8    2.9  2  Nucleoporin_N  Nup133 N terminal like
       0.79    8.7   3.3        1.4    8.0   3.3    1.3  1  Atg14          Vacuolar sorting 38 and autophagy-related subu
       0.85    9.6   7.9       0.18   11.8   3.1    2.0  2  Prefoldin_2    Prefoldin subunit


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.0   0.00013      0.15       3      36 ..     249     281 ..     247     283 .. 0.81
   2 !   29.7   0.0   6.5e-10   7.8e-07      13      38 .]     306     331 ..     294     331 .. 0.92
   3 !   33.0   0.0     6e-11   7.2e-08       6      38 .]     340     373 ..     335     373 .. 0.91
   4 !   28.0   0.0   2.2e-09   2.6e-06      10      37 ..     384     413 ..     378     414 .. 0.88
   5 !   36.1   0.1   6.3e-12   7.6e-09       4      37 ..     420     454 ..     417     455 .. 0.90
   6 !   37.6   0.4   2.1e-12   2.5e-09       3      38 .]     473     509 ..     471     509 .. 0.92
   7 !   23.3   0.2   7.1e-08   8.5e-05       4      38 .]     516     551 ..     513     551 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 0.00013
                 EEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEE CS
        WD40   3 clrtltGHss.vtslafspdgawlasGsdDgtvri 36 
                 +l+tl+ H+s ++ ++fs dg++la+G+ ++  ++
  EPX71341.1 249 LLHTLE-HTSvICYVRFSADGKYLATGC-NRAAMV 281
                 689995.967479999***********9.876655 PP

  == domain 2  score: 29.7 bits;  conditional E-value: 6.5e-10
                 EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  13 vtslafspdgawlasGsdDgtvriWd 38 
                 v+s+afspdg++la+G +D+ +riWd
  EPX71341.1 306 VRSVAFSPDGKFLATGVEDRQIRIWD 331
                 99**************99*******9 PP

  == domain 3  score: 33.0 bits;  conditional E-value: 6e-11
                 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  ltGH + ++sl+fs+dg+ l+sGs D+t+ +Wd
  EPX71341.1 340 LLTGHeQEIYSLDFSKDGKTLISGSGDRTICLWD 373
                 479**888****************99*******9 PP

  == domain 4  score: 28.0 bits;  conditional E-value: 2.2e-09
                 S.SS.EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  10 H.ss.vtslafspdgawlasGsdDgtvriW 37 
                 H ++ vt +afspd++++++Gs D+ +r+W
  EPX71341.1 384 HtDDgVTTVAFSPDNQFIVAGSLDKVIRVW 413
                 75335************************* PP

  == domain 5  score: 36.1 bits;  conditional E-value: 6.3e-12
                 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 +  l GH  sv+s++fspdg+ l+sGs D+t+r+W
  EPX71341.1 420 VEQLVGHqESVYSICFSPDGSHLVSGSLDNTIRLW 454
                 55688**888************************* PP

  == domain 6  score: 37.6 bits;  conditional E-value: 2.1e-12
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 c ++++GH +++ s+a spdg+w++sGs+D+t+ +W+
  EPX71341.1 473 CKQIFSGHkDFILSVAMSPDGRWIISGSKDRTIQFWS 509
                 8899****666*************************5 PP

  == domain 7  score: 23.3 bits;  conditional E-value: 7.1e-08
                 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 + tl GH +sv s+a sp+g+ +a+Gs D   riW+
  EPX71341.1 516 QLTLQGHnNSVISVAISPNGHTFATGSGDLRARIWS 551
                 67999**99988**************99*******5 PP

>> Tup_N  Tup N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.6   9.6     1e-28   1.2e-25       1      76 [.       9      86 ..       9      87 .. 0.99

  Alignments for each domain:
  == domain 1  score: 89.6 bits;  conditional E-value: 1e-28
       Tup_N  1 RlnelLdavkqEfdalsqeasslkaqkdeyelk..iqsqiqElqqirqtlyeLeeahrkikqqYEeeiarLkaeLesr 76
                R+ elL+a+k+Efd++s++ +s++++kd++++k  i+sqiqE++ ++qt+++Le++++k+k++YE+eiarLk++Le+r
  EPX71341.1  9 RVYELLEALKKEFDEVSKKSQSSEHHKDDFDYKgvISSQIQEIALMKQTVMDLEMQQNKVKERYEDEIARLKTQLENR 86
                89**************************************************************************98 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   0.0    0.0021       2.5      36      80 ..     254     297 ..     228     300 .. 0.81
   2 !   21.9   0.0   1.4e-07   0.00016      34      76 ..     299     341 ..     295     346 .. 0.87
   3 !   16.5   0.0   6.3e-06    0.0076      27      87 ..     335     392 ..     332     397 .. 0.81
   4 ?    4.1   0.0     0.049        58      37      71 ..     385     418 ..     381     426 .. 0.83
   5 !   17.0   0.0   4.5e-06    0.0054       2      73 ..     393     462 ..     392     478 .. 0.81
   6 ?    4.4   0.0      0.04        48      37      81 ..     480     524 ..     473     530 .. 0.79
   7 ?    2.6   0.0      0.14   1.7e+02      35      66 ..     520     551 ..     513     554 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0021
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvks 80 
                  ++ s +  ++++ dgk La +++  +  ++++e+g++v+ l+ +s
   EPX71341.1 254 EHTSVICYVRFSADGKYLATGCNRAA-MVFSVETGQLVNLLQEES 297
                  6677788899************8766.589********9988766 PP

  == domain 2  score: 21.9 bits;  conditional E-value: 1.4e-07
  ANAPC4_WD40  34 edkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhsl 76 
                  e + d  vrs+a++pdgk+La +++d ++r+ d+ +++v + l
   EPX71341.1 299 EREGDLYVRSVAFSPDGKFLATGVEDRQIRIWDIAQKRVYRLL 341
                  5678999***************************999887655 PP

  == domain 3  score: 16.5 bits;  conditional E-value: 6.3e-06
  ANAPC4_WD40  27 qrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtcl 87 
                  +rv+ l  +++++e+ sL +++dgk L  +  d ++ l d+e g+    l++++   vt++
   EPX71341.1 335 KRVYRL-LTGHEQEIYSLDFSKDGKTLISGSGDRTICLWDVEAGEQKLILHTDDG--VTTV 392
                  788888.67899*******************************986544444433..6655 PP

  == domain 4  score: 4.1 bits;  conditional E-value: 0.049
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgk 71 
                  +d  v+ +a++pd+++++ +  d  +r+  a sg+
   EPX71341.1 385 TDDGVTTVAFSPDNQFIVAGSLDKVIRVWTA-SGT 418
                  57789******************99998876.455 PP

  == domain 5  score: 17.0 bits;  conditional E-value: 4.5e-06
  ANAPC4_WD40   2 swcptmDLiAlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvv 73 
                  +++p +  i  ++ d+ ++v   +g  v +l   +++++v s++++pdg+ L+ +  d+++rl + + ++ +
   EPX71341.1 393 AFSPDNQFIVAGSLDKVIRVWTASGTLVEQL--VGHQESVYSICFSPDGSHLVSGSLDNTIRLWELQATRRI 462
                  5777777777777777777777777777777..899***************************998877665 PP

  == domain 6  score: 4.4 bits;  conditional E-value: 0.04
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  ++  + s+a +pdg+ +  + +d ++++ +  s +   +l+ +++
   EPX71341.1 480 HKDFILSVAMSPDGRWIISGSKDRTIQFWSLDSSTSQLTLQGHNN 524
                  566788999*******************99988877766666665 PP

  == domain 7  score: 2.6 bits;  conditional E-value: 0.14
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlld 66 
                  ++++++v s+a +p+g+ +a +  d + r+ +
   EPX71341.1 520 QGHNNSVISVAISPNGHTFATGSGDLRARIWS 551
                  5688999***************9999988876 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.91   1.1e+03       6      38 ..     262     293 ..     258     297 .. 0.82
   2 ?   -0.5   0.0      0.51   6.1e+02       4      35 ..     307     338 ..     304     345 .. 0.85
   3 !   19.7   0.0   3.7e-07   0.00044       1      65 [.     346     410 ..     346     422 .. 0.87
   4 ?    3.5   0.0     0.031        37       2      33 ..     429     460 ..     428     469 .. 0.89
   5 !    9.5   0.0   0.00047      0.56       3      49 ..     484     530 ..     482     548 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.91
   WD40_like   6 idiskkgslilyGgkddkctvlkleslesvsiv 38 
                 + +s +g++++ G ++  + v+++e++++v ++
  EPX71341.1 262 VRFSADGKYLATGCNR-AAMVFSVETGQLVNLL 293
                 678999*****99987.5779999999999876 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.51
   WD40_like   4 YsidiskkgslilyGgkddkctvlkleslesv 35 
                  s+ +s++g++++ G +d ++++ ++ ++ + 
  EPX71341.1 307 RSVAFSPDGKFLATGVEDRQIRIWDIAQKRVY 338
                 58999*******************99887665 PP

  == domain 3  score: 19.7 bits;  conditional E-value: 3.7e-07
   WD40_like   1 eeiYsidiskkgslilyGgkddkctvlkleslesvsivesfedSvifvklldddlilvv.tlDGti 65 
                 +eiYs+d+sk+g+ ++ G+ d ++ + ++e +e++ i++  +d v  v +  d++++v+ +lD  i
  EPX71341.1 346 QEIYSLDFSKDGKTLISGSGDRTICLWDVEAGEQKLILH-TDDGVTTVAFSPDNQFIVAgSLDKVI 410
                 59*******************************998876.599*******9999887753777666 PP

  == domain 4  score: 3.5 bits;  conditional E-value: 0.031
   WD40_like   2 eiYsidiskkgslilyGgkddkctvlklesle 33 
                  +Ysi +s++gs ++ G+ d+++++ +l+   
  EPX71341.1 429 SVYSICFSPDGSHLVSGSLDNTIRLWELQATR 460
                 79***********************9998765 PP

  == domain 5  score: 9.5 bits;  conditional E-value: 0.00047
   WD40_like   3 iYsidiskkgslilyGgkddkctvlkleslesvsivesfedSvifvk 49 
                 i s+ +s++g  i+ G+kd +++  +l+s +s   +++ ++Svi v 
  EPX71341.1 484 ILSVAMSPDGRWIISGSKDRTIQFWSLDSSTSQLTLQGHNNSVISVA 530
                 67999**************************************9876 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0     0.015        18     183     210 ..     252     279 ..     230     295 .. 0.83
   2 !    9.2   0.0   0.00045      0.54     189     219 ..     305     335 ..     279     345 .. 0.83
   3 ?    2.8   0.0      0.04        48     177     214 ..     374     413 ..     334     422 .. 0.61
   4 !    5.5   0.0    0.0058       6.9     187     217 ..     427     457 ..     414     469 .. 0.83
   5 !    5.6   0.0    0.0053       6.4     184     216 ..     477     510 ..     458     517 .. 0.74
   6 ?    1.4   0.0      0.11   1.3e+02     180     214 ..     515     550 ..     509     552 .. 0.79

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.015
    Ge1_WD40 183 kieehsliveaafspdGtalatasedGe 210
                  +e++s i    fs+dG  lat ++   
  EPX71341.1 252 TLEHTSVICYVRFSADGKYLATGCNRAA 279
                 4677789999*************98665 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00045
    Ge1_WD40 189 liveaafspdGtalatasedGevkffqvyle 219
                  + + afspdG  lat  ed +++ + + ++
  EPX71341.1 305 YVRSVAFSPDGKFLATGVEDRQIRIWDIAQK 335
                 477899********************99765 PP

  == domain 3  score: 2.8 bits;  conditional E-value: 0.04
    Ge1_WD40 177 ieegllkieehs..liveaafspdGtalatasedGevkff 214
                 +e g  k+  h+   +++ afspd   + + s d +++ +
  EPX71341.1 374 VEAGEQKLILHTddGVTTVAFSPDNQFIVAGSLDKVIRVW 413
                 3333333322221257788888888888888888888776 PP

  == domain 4  score: 5.5 bits;  conditional E-value: 0.0058
    Ge1_WD40 187 hsliveaafspdGtalatasedGevkffqvy 217
                 +  + +  fspdG  l   s d +++++ + 
  EPX71341.1 427 QESVYSICFSPDGSHLVSGSLDNTIRLWELQ 457
                 44788899*******************9875 PP

  == domain 5  score: 5.6 bits;  conditional E-value: 0.0053
    Ge1_WD40 184 ieehs.liveaafspdGtalatasedGevkffqv 216
                 ++ h   i + a+spdG  +   s+d +++f+ +
  EPX71341.1 477 FSGHKdFILSVAMSPDGRWIISGSKDRTIQFWSL 510
                 3445447999**********************76 PP

  == domain 6  score: 1.4 bits;  conditional E-value: 0.11
    Ge1_WD40 180 gllkieehs.liveaafspdGtalatasedGevkff 214
                 + l ++ h   +++ a+sp+G + at s d   + +
  EPX71341.1 515 SQLTLQGHNnSVISVAISPNGHTFATGSGDLRARIW 550
                 567777776589999*************99776665 PP

>> PD40  WD40-like Beta Propeller Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       1.7     2e+03      13      24 ..     133     144 ..     132     144 .. 0.85
   2 ?    4.0   0.0     0.042        51      15      24 ..     263     272 ..     261     272 .. 0.91
   3 !    6.4   0.0    0.0071       8.5      15      24 ..     310     319 ..     305     319 .. 0.87
   4 ?    3.7   0.0      0.05        60      16      24 ..     353     361 ..     340     361 .. 0.81
   5 ?    0.8   0.0      0.41   4.9e+02      14      24 ..     392     402 ..     386     402 .. 0.83
   6 ?    2.2   0.0      0.15   1.8e+02      16      23 ..     435     442 ..     428     443 .. 0.85
   7 ?    4.5   0.0     0.028        34      17      24 ..     490     497 ..     486     497 .. 0.89
   8 ?   -3.0   0.0       6.6   7.9e+03      15      23 ..     530     538 ..     528     539 .. 0.78

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1.7
                 EEEE-TTSSEEE CS
        PD40  13 aPsfSPDGkrla 24 
                 +P+++ DG+ la
  EPX71341.1 133 SPAVDSDGTALA 144
                 79******9776 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.042
                 EE-TTSSEEE CS
        PD40  15 sfSPDGkrla 24 
                 +fS DGk+la
  EPX71341.1 263 RFSADGKYLA 272
                 7*******97 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.0071
                 EE-TTSSEEE CS
        PD40  15 sfSPDGkrla 24 
                 +fSPDGk la
  EPX71341.1 310 AFSPDGKFLA 319
                 8******987 PP

  == domain 4  score: 3.7 bits;  conditional E-value: 0.05
                 E-TTSSEEE CS
        PD40  16 fSPDGkrla 24 
                 fS+DGk+l+
  EPX71341.1 353 FSKDGKTLI 361
                 9******96 PP

  == domain 5  score: 0.8 bits;  conditional E-value: 0.41
                 EEE-TTSSEEE CS
        PD40  14 PsfSPDGkrla 24 
                  +fSPD + ++
  EPX71341.1 392 VAFSPDNQFIV 402
                 59****99875 PP

  == domain 6  score: 2.2 bits;  conditional E-value: 0.15
                 E-TTSSEE CS
        PD40  16 fSPDGkrl 23 
                 fSPDG+ l
  EPX71341.1 435 FSPDGSHL 442
                 9****977 PP

  == domain 7  score: 4.5 bits;  conditional E-value: 0.028
                 -TTSSEEE CS
        PD40  17 SPDGkrla 24 
                 SPDG++++
  EPX71341.1 490 SPDGRWII 497
                 9*****96 PP

  == domain 8  score: -3.0 bits;  conditional E-value: 6.6
                 EE-TTSSEE CS
        PD40  15 sfSPDGkrl 23 
                 ++SP+G ++
  EPX71341.1 530 AISPNGHTF 538
                 79***9666 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       1.8   2.1e+03     146     161 ..     259     274 ..     246     293 .. 0.75
   2 !   14.4   0.0   2.1e-05     0.026      62     185 ..     306     422 ..     294     433 .. 0.75
   3 !   13.8   0.0   3.4e-05     0.041      59     177 ..     345     455 ..     329     460 .. 0.70
   4 !    7.3   0.0    0.0033       3.9      61     169 ..     429     549 ..     422     553 .. 0.78

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 1.8
                 --EEEE-TTSSEEEEE CS
       eIF2A 146 atlvewspdgryvlTa 161
                   +v +s dg+y++T 
  EPX71341.1 259 ICYVRFSADGKYLATG 274
                 4578999999999996 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 2.1e-05
                 EEEEEE-TTSS-EEEEESSSSCEEEEEECSCEEEEEE...EEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETT.TTEEEEEEE-TT--EEEE-TTSS CS
       eIF2A  62 ihdvaWspkskefaviyGkmpakvslfdlkvkviskl...eeqkrNtiffspkgklvllaGfgnlaGeleiwdvk.kkkkiakaeaanatlvewspdgr 156
                 +  va sp++k   +  G  ++++ ++d   k +++l   +eq+  ++ fs+ gk ++ +G g+   ++ +wdv+   +k+        t+v +spd +
  EPX71341.1 306 VRSVAFSPDGKF--LATGVEDRQIRIWDIAQKRVYRLltgHEQEIYSLDFSKDGKTLI-SGSGDR--TICLWDVEaGEQKLILHTDDGVTTVAFSPDNQ 399
                 556667777663..3579999*******9755555551116777778889*99*9876.566776..799*****855555556666778899****** PP

                 EEEEEE-TTT-SSS-EEEEEETTTEEEEE CS
       eIF2A 157 yvlTattaprlrvdngfkiwsysGklvyk 185
                 +++  +      +d  +++w+ sG+lv++
  EPX71341.1 400 FIVAGS------LDKVIRVWTASGTLVEQ 422
                 **9765......4789999*****99976 PP

  == domain 3  score: 13.8 bits;  conditional E-value: 3.4e-05
                 SS.EEEEEE-TTSS-EEEEESSSSCEEEEEECS.CEEEEEEE.EES--EEEE-TTSSEEEEE-TTSSS-EEEEEETT..TTEEEEEEE-TT--EEEE-T CS
       eIF2A  59 egpihdvaWspkskefaviyGkmpakvslfdlk.vkviskle.eqkrNtiffspkgklvllaGfgnlaGeleiwdvk..kkkkiakaeaanatlvewsp 153
                 e +i+ +  s+++k   +i G  ++++ l+d++ ++++  l+  +   t+ fsp +++++ + +  +   + +w  +   ++++   +++   ++ +sp
  EPX71341.1 345 EQEIYSLDFSKDGKT--LISGSGDRTICLWDVEaGEQKLILHtDDGVTTVAFSPDNQFIVAGSLDKV---IRVWTASgtLVEQLVGHQESVY-SICFSP 437
                 556777777777775..689999999****997644444444045578999*******999999999...9999999633444444444443.456999 PP

                 TSSEEEEEE-TTT-SSS-EEEEEE CS
       eIF2A 154 dgryvlTattaprlrvdngfkiws 177
                 dg++++  +      +dn++++w+
  EPX71341.1 438 DGSHLVSGS------LDNTIRLWE 455
                 999998654......356666665 PP

  == domain 4  score: 7.3 bits;  conditional E-value: 0.0033
                 .EEEEEE-TTSS-EEEEESSSSCEEEEEECS...............CEEEEEEEEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETT.TTEEEEEEE- CS
       eIF2A  61 pihdvaWspkskefaviyGkmpakvslfdlk...............vkviskleeqkrNtiffspkgklvllaGfgnlaGeleiwdvk.kkkkiakaea 143
                  ++ ++ sp++++  ++ G  ++++ l++l+               +k+i++ +++   ++  sp g+ ++ +       ++++w  + ++++++ + +
  EPX71341.1 429 SVYSICFSPDGSH--LVSGSLDNTIRLWELQatrrippssikeggiCKQIFSGHKDFILSVAMSPDGRWIISGSKDR---TIQFWSLDsSTSQLTLQGH 522
                 4677777777775..57899999999999966777888888888889999999999999999999999998766554...59**999977777887778 PP

                 TT--.EEEE-TTSSEEEEEE-TTT-SS CS
       eIF2A 144 anat.lvewspdgryvlTattaprlrv 169
                  n++ +v  sp+g+ ++T +   r r+
  EPX71341.1 523 NNSViSVAISPNGHTFATGSGDLRARI 549
                 777635899*******99987777665 PP

>> Gmad1  Lipoprotein LpqB beta-propeller domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.018        21      14      52 ..     120     156 ..     110     166 .. 0.83
   2 !    6.9   0.0     0.004       4.8      20      92 ..     301     385 ..     281     440 .. 0.77
   3 ?   -2.5   0.0       2.9   3.5e+03       6      39 ..     412     444 ..     404     454 .. 0.75
   4 ?    1.7   0.0      0.15   1.8e+02      27      73 ..     486     530 ..     476     553 .. 0.57

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.018
       Gmad1  14 vpGplgegavdlrsaAvSrdgqqvaavtapdggrtLvvg 52 
                  +G+ g++  +lrs+Av  dg+ +a ++   ++++L+ +
  EPX71341.1 120 ANGISGSAPTSLRSPAVDSDGTALAPLQ--LPNSELASQ 156
                 5799*********************999..777777665 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.004
       Gmad1  20 egavdlrsaAvSrdgqqvaavt..........apdggrtLvvgsyggeasevl..eggsltrpSwdrdgalWvvedgaevvravr 92 
                 eg++++rs+A S+dg+ +a             a++   +L +g + + +s  +  +g++l + S dr   lW ve+g+++  +  
  EPX71341.1 301 EGDLYVRSVAFSPDGKFLATGVedrqiriwdiAQKRVYRLLTGHEQEIYSLDFskDGKTLISGSGDRTICLWDVEAGEQKLILHT 385
                 78999***********998655488888877666666677777666666665577888999999999999999998887765555 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 2.9
       Gmad1   6 vsggrvepvpGplgegavdlrsaAvSrdgqqvaa 39 
                 v   + + v+  +g+ + ++ s   S+dg+++++
  EPX71341.1 412 VWTASGTLVEQLVGHQE-SVYSICFSPDGSHLVS 444
                 55566677888888888.8899999999988765 PP

  == domain 4  score: 1.7 bits;  conditional E-value: 0.15
       Gmad1  27 saAvSrdgqqvaavtapdggrtLvvgsyggeasevl.eggsltrpSwd 73 
                 s+A+S+dg+ +++ +   + rt+  +s ++ +s+++ +g++ +  S+ 
  EPX71341.1 486 SVAMSPDGRWIISGS---KDRTIQFWSLDSSTSQLTlQGHNNSVISVA 530
                 677777777776666...666666666666666665555533333332 PP

>> Frtz  WD repeat-containing and planar cell polarity effector protein Fritz
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0     0.059        70     260     334 ..     257     338 ..     223     351 .. 0.69
   2 !    7.1   0.0    0.0012       1.4     261     339 ..     347     425 ..     343     433 .. 0.85
   3 ?    3.2   0.0     0.018        21     260     289 ..     428     457 ..     422     462 .. 0.89
   4 ?   -1.7   0.0      0.57   6.8e+02     262     296 ..     484     518 ..     480     532 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.059
        Frtz 260 aqvislafnpdedkLllGceDssviLydeerkitklvka.......evvPsliswhpdsaillvasergelqifDlaLspir 334
                 + ++ + f+ d   L  Gc+  ++++  e+ ++ +l +        ++    +++ pd+  l  + e  +++i+D+a   + 
  EPX71341.1 257 SVICYVRFSADGKYLATGCNRAAMVFSVETGQLVNLLQEesaeregDLYVRSVAFSPDGKFLATGVEDRQIRIWDIAQKRVY 338
                 4445555666666677888888888777777777776541112222466778899999999999999999999999977665 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0012
        Frtz 261 qvislafnpdedkLllGceDssviLydeerkitklv.kaevvPsliswhpdsaillvasergelqifDlaLspiriqlls 339
                 ++ sl f++d   L+ G+ D +++L+d e +  kl+ +++   +++++ pd+  ++ +s   +++++  a  ++  ql+ 
  EPX71341.1 347 EIYSLDFSKDGKTLISGSGDRTICLWDVEAGEQKLIlHTDDGVTTVAFSPDNQFIVAGSLDKVIRVWT-ASGTLVEQLVG 425
                 5778889999********************999998889999999*******9999999999999885.55666666665 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.018
        Frtz 260 aqvislafnpdedkLllGceDssviLydee 289
                   v s +f+pd   L+ G+ D+++ L++ +
  EPX71341.1 428 ESVYSICFSPDGSHLVSGSLDNTIRLWELQ 457
                 6799***********************976 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 0.57
        Frtz 262 vislafnpdedkLllGceDssviLydeerkitklv 296
                 + s+a++pd   ++ G++D ++ ++  +  + +l+
  EPX71341.1 484 ILSVAMSPDGRWIISGSKDRTIQFWSLDSSTSQLT 518
                 78999*****************9999999888887 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0     0.064        77     199     251 ..     289     336 ..     221     345 .. 0.79
   2 ?    7.0   0.1    0.0016       1.9     216     254 ..     380     421 ..     372     475 .. 0.86
   3 ?   -1.3   0.0      0.53   6.3e+02     222     251 ..     486     514 ..     476     524 .. 0.74

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.064
                 TTT.TSS--SS---TT-ECEEEEET.....TTTEEEEEETT-EEEEEETTTTE CS
      Nup160 199 llglladpsrrksgasvalsldvavavveigqtylfalsrdgkLrvWnlltgk 251
                 l++ll+  s  ++g     s+++++     + ++l++   d+ +r+W+++ ++
  EPX71341.1 289 LVNLLQEESAEREGDLYVRSVAFSP-----DGKFLATGVEDRQIRIWDIAQKR 336
                 5555555555555555555555555.....8999**************98876 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0016
                 ECEEEEET.........TTTEEEEEETT-EEEEEETTTTEEEE CS
      Nup160 216 alsldvavavvei....gqtylfalsrdgkLrvWnlltgkcla 254
                 +l l++  +v+++    ++++++a s+d+++rvW +++g++++
  EPX71341.1 380 KLILHTDDGVTTVafspDNQFIVAGSLDKVIRVW-TASGTLVE 421
                 56777888888888888*****************.66666665 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 0.53
                 ET.....TTTEEEEEETT-EEEEEETTTTE CS
      Nup160 222 avavveigqtylfalsrdgkLrvWnlltgk 251
                 +va++  +   + + s d++++ W+l++ +
  EPX71341.1 486 SVAMSP-DGRWIISGSKDRTIQFWSLDSST 514
                 344443.7788888899*********9764 PP

>> Cytochrom_D1  Cytochrome D1 heme domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.0   0.00064      0.77      35      95 ..     302     364 ..     263     368 .. 0.85
   2 ?    3.2   0.0     0.021        25      30      88 ..     476     535 ..     394     543 .. 0.69

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00064
                   TTE.EEEEE-TT.SSEEEEEETTSEEEEEESSSSSEEEEEE-SSEE..EEEEE--TTSEEEEEE CS
  Cytochrom_D1  35 yal.HisrvfasdgRyvyvigRDgkvtliDLwakeivaevkiGlna..rsvavSqddryvivgn 95 
                   ++l   s+ f++dg+++ +   D ++ + D+ +k++  ++  G +    s++ S+d++ +i g+
    EPX71341.1 302 GDLyVRSVAFSPDGKFLATGVEDRQIRIWDIAQKRV-YRLLTGHEQeiYSLDFSKDGKTLISGS 364
                   566345899*********************987775.5677776542279*********99986 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.021
                   EEE-STTEEEEEE-TT.SSEEEEEETTSEEEEEESSSSSEEEEEE-SSEE.EEEEE--TT CS
  Cytochrom_D1  30 vletgyalHisrvfasdgRyvyvigRDgkvtliDLwakeivaevkiGlna.rsvavSqdd 88 
                   ++ ++ +   s+  ++dgR++   ++D +++   L   +   +++   n+ +sva+S ++
    EPX71341.1 476 IFSGHKDFILSVAMSPDGRWIISGSKDRTIQFWSLDSSTSQLTLQGHNNSvISVAISPNG 535
                   445555555666666666666666666666666555554444443333323456666555 PP

>> nos_propeller  Nitrous oxide reductase propeller repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       2.2   2.6e+03      20      30 ..     265     275 ..     255     292 .. 0.78
   2 ?   -1.3   0.0       1.8   2.2e+03      29      44 ..     308     324 ..     287     342 .. 0.61
   3 ?    1.1   0.0      0.32   3.9e+02       8      28 ..     424     444 ..     420     447 .. 0.91
   4 ?    7.0   0.0    0.0044       5.3       9      50 ..     479     517 ..     475     536 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 2.2
  nos_propeller  20 epdGkylvaln 30 
                    ++dGkyl + +
     EPX71341.1 265 SADGKYLATGC 275
                    68999998754 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 1.8
  nos_propeller  29 lnKlskd.rflpvGplk 44 
                       +s d +fl +G + 
     EPX71341.1 308 SVAFSPDgKFLATGVED 324
                    44444433566666555 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.32
  nos_propeller   8 iGHlsaaegdtkepdGkylva 28 
                    +GH  ++ +   +pdG +lv+
     EPX71341.1 424 VGHQESVYSICFSPDGSHLVS 444
                    8******************98 PP

  == domain 4  score: 7.0 bits;  conditional E-value: 0.0044
  nos_propeller   9 GHlsaaegdtkepdGkylvalnKlskdrflpvGplkpeneqL 50 
                    GH     + +++pdG+++++ +K   dr ++   l   ++qL
     EPX71341.1 479 GHKDFILSVAMSPDGRWIISGSK---DRTIQFWSLDSSTSQL 517
                    999999999***********965...6666665555555555 PP

>> Nucleoporin_N  Nup133 N terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0       0.2   2.4e+02     213     240 ..     333     361 ..     305     386 .. 0.66
   2 ?    9.1   0.8   0.00041      0.49     185     242 ..     470     522 ..     378     551 .. 0.78

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.2
                    T.CEEEEEETTSEEEEEEEETTCEE-EEE CS
  Nucleoporin_N 213 r.rilytlsskgvirvydlsasngesslk 240
                      +++y l+++++ ++y l +s ++++l 
     EPX71341.1 333 AqKRVYRLLTGHEQEIYSLDFSKDGKTLI 361
                    34555556666666666555555555554 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00041
                    -...--SSS--G----GG-EEEEEEECCTCEEEEEETTSEEEEEEEETTCEE-EEEEE CS
  Nucleoporin_N 185 ssllsilpgvlsgasereeivqlridssrrilytlsskgvirvydlsasngesslksd 242
                    +   +i ++++s    ++ i +++ ++  r++++ s +++i+++ l +s ++ +l ++
     EPX71341.1 470 G---GICKQIFS--GHKDFILSVAMSPDGRWIISGSKDRTIQFWSLDSSTSQLTLQGH 522
                    2...77888888..88999***************************977656555544 PP

>> Atg14  Vacuolar sorting 38 and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   3.3    0.0012       1.4      31     131 ..      14     116 ..       7     120 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0012
       Atg14  31 laklksekeslkkkiekalegkeeaeqledkiknkkakleelksliadlrerlqelkdklsqlkkeieekkkklaklsdklk......kRrsdleslqn 123
                 l  lk+e +++ kk +  + +k+   + +  i ++ + + ++k+++ dl+ + +++k++ +   +ei+  k +l+ ++++l+      +Rrs+ +  + 
  EPX71341.1  14 LEALKKEFDEVSKKSQSSEHHKD-DFDYKGVISSQIQEIALMKQTVMDLEMQQNKVKERYE---DEIARLKTQLENRRKELAsgtifgRRRSSVSMGKP 108
                 66789999999999999888888.6678888999999999999999999999999998764...78999999999999999999999899998776666 PP

       Atg14 124 eleerrkk 131
                   +e+ k+
  EPX71341.1 109 GFSESSKT 116
                 66666555 PP

>> Prefoldin_2  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.2      0.97   1.2e+03      60      82 ..      10      32 ..       4      39 .. 0.51
   2 ?   11.8   3.1   0.00015      0.18      55      93 ..      53      91 ..      51      92 .. 0.95

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.97
                 HHHHHHHHHHHHHHHHHHHHHHH CS
  Prefoldin_2 60 keevkeeLeerketlekeiktle 82
                 + e++e L+++ ++++k++++ e
   EPX71341.1 10 VYELLEALKKEFDEVSKKSQSSE 32
                 44455555555555555544444 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 0.00015
                 EEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Prefoldin_2 55 lvkqdkeevkeeLeerketlekeiktlekqleklekele 93
                 l+kq++++++ + ++ ke++e ei++l+ qle+ +kel+
   EPX71341.1 53 LMKQTVMDLEMQQNKVKERYEDEIARLKTQLENRRKELA 91
                 89*******************************999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (555 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       959  (0.0534888); expected 358.6 (0.02)
Passed bias filter:                      649  (0.0361983); expected 358.6 (0.02)
Passed Vit filter:                        83  (0.00462937); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.75u 0.30s 00:00:01.05 Elapsed: 00:00:00.46
# Mc/sec: 3630.35
//
Query:       EPX71342.1  [L=1331]
Description: tuberin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      8e-62  209.7  12.4    1.8e-61  208.5  12.4    1.6  1  DUF3384   Domain of unknown function (DUF3384)
      1e-45  155.6   0.1    2.5e-45  154.3   0.1    1.7  1  Rap_GAP   Rap/ran-GAP
    1.7e-26   93.2   8.1    2.3e-26   92.8   3.1    3.2  2  Tuberin   Tuberin


Domain annotation for each model (and alignments):
>> DUF3384  Domain of unknown function (DUF3384)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  208.5  12.4     3e-65   1.8e-61       4     457 ..      31     457 ..      28     475 .. 0.90

  Alignments for each domain:
  == domain 1  score: 208.5 bits;  conditional E-value: 3e-65
                 HHHHHHHHHHHHHH-TTS-..-HHHHHHHHHHHSTT.S-HHHHHHHHHHHHHHC.T-TT--HHHHHHHHHHHHS.....S.--GGGHHHHHHHHHHHCT CS
     DUF3384   4 RikaaraLaaaveryslds..vaevWrlakdLltae.qpqelRiaglnLltacvkkdqelsaieRalfFrlilsrkndes.seiddlplqLeaLevLTk 98 
                 R + +r++ + +++y ++s  +  vW++++d+++ + +++++R  ++nL+++++ +++els +eR  fF++i +    ++ ++  +l l L+ L vLT+
  EPX71342.1  31 RSAIVRSIYQRLKNYIYSSisINLVWNNIQDFFSVKtNNRDMRVLAYNLMERYIYTQKELSLMERYVFFQSIEQ----NDfHDLAELRLKLKTLNVLTQ 125
                 778899*************99**********9998879************************************....44455689************* PP

                 TTT--TT-TTTHHHHHHHHHHHHHHHH..H---------------HHHHHHHHHHHHHHHHHHHHGGGS-HHHHHHHHHHHHHHHCS-S-HHHHHHHHH CS
     DUF3384  99 dGrdiegfeyeilplLtrwldealaskdnadeaakqqtkaisqlsseernlqqllqlltdilkfnfarldeseveslirsaleicigtsnaddlrsclk 197
                 +G++++g+e++i+plL +w+ +a + ++n +e+++ +       ++    l++l+++  +++kf+f r++e ++ +li+s++e+c++t  ++ +++ l 
  EPX71342.1 126 EGHKLSGIENKICPLLATWFIQAHQLQTNLSEENVLK-------EEGLLFLAELFNFSSNLVKFQFYRVPERHALMLINSVVEVCNRTPLTEVVEKTLL 217
                 ************************5455555555554.......4466899************************************************ PP

                 HHHHHHHHS---HHHHHHHHHHHHHHHHH-GG....GHHHHHHHHHHHHCSTCHHHHHHHHHHHHHT---SHHHHHHHHHHHHHHHHHHHHHTT--T.. CS
     DUF3384 198 lldaiiryghlPsasldvvikvLCsiycridsndddlqkevwrilsnllkshvgnaairslldiLtdpseakaaqkedpavlrGAvevlrllllssk.. 294
                 l+da++ry+++P +s ++++ +LCs++++  s    ++k + +++ nl++sh+ + +++++ diL++  +       + + +rGAv+++r ++l+++  
  EPX71342.1 218 LFDALVRYSSVPASSVNEIVIILCSAFVSTFS----YSKLANSVVVNLFQSHISHTVFEVIVDILRNLRT-------NVNAVRGAVRLMRFFVLQESsi 305
                 ***************************99999....*******************************888.......*****************66644 PP

                 .T--......---HHHHHHHHHHHHCS--HHHHHHHHHHHHHHH--------GGGTTS--HHHHHHHHHCCTTTEE------------GE-HHHHHHHH CS
     DUF3384 295 .gqpedalapslslalllpalraalkrqsdvldlevlqlisdlLpsasvsrdkllaesdWdalldlliecsrrledlkeedkasssseeeksslaaels 392
                  ++++  l+ s+ +++l  ++       +  +d+e+l ++   L++ s  ++++l++ dW  ++++l   s++l  ++   +++++s     + aa + 
  EPX71342.1 306 ePMTSFTLSSSIKYTELPLGY-------HETIDFEILGTVFLYLRNPS--ICSQLSSVDWRRIYNILMFSSSYLPLES---SEHRMS----INYAAAFA 388
                 555555555555555555555.......55699*************99..***********************88886...444444....47788899 PP

                 HHHHHHHHHHH....HGGGSTTHHHHHHHHHHHH-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
     DUF3384 393 sllssleslle....sgedsgqkekliafflevssalpdstaeavLkyldkerlcspsnedWlenlkkl 457
                 +l++++  +le      ++    ekli ff ++ + l+  t +++++y++  +l  ps++ W  nl+ l
  EPX71342.1 389 NLYDRILDVLEidafIPSFIFFEEKLIGFFYKILPLLKAPTLKKLVHYIEICNLTCPSSSYWTLNLSFL 457
                 99999999999887789999*********************************************9887 PP

>> Rap_GAP  Rap/ran-GAP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  154.3   0.1   4.2e-49   2.5e-45       1     185 [.    1102    1294 ..    1102    1295 .. 0.91

  Alignments for each domain:
  == domain 1  score: 154.3 bits;  conditional E-value: 4.2e-49
     Rap_GAP    1 ilsNeevSkrfeeFlelLGekvelkgf.kgYsggLdtkknttGehsvytkdrnleimFhVstllpt.kesdkqqlerkrhigndivvIvFnesgeke 95  
                  il+N++ S+ f+eFl+ LG + elkg  + Y+ggLd+++n +Ge+++y++d+ ++++Fh +tl+pt  e+d+ ++ +krhignd+v+I++nesg   
  EPX71342.1 1102 ILANTDPSHGFKEFLNGLGILKELKGSkELYTGGLDREHNIDGEFAYYWRDKVTQLVFHCTTLMPTnFERDPSCTMKKRHIGNDFVNIIYNESG-LV 1197
                  799**88********************999***********************************96799**********************99.89 PP

     Rap_GAP   96 fdpsliksqfnhvfivvqpl....ekekskeelyrvsvvskksvppfgPllpeekivskkslaelvrflltkainaeraal.......k.assfrer 180 
                  ++ ++i+sqf +v+iv++p     ++ +++ ++y+v+  +k +++  + + +++k+vs +sl+ +vr +    +na  +++       + +s ++er
  EPX71342.1 1198 YNFDTIPSQFSFVNIVISPEfepnNSLNESPKFYKVEAQTKYDIDF-SLF-NSHKLVSLESLPAIVRDV---TLNAAVFSHiyhqgagDyVSIWTER 1289
                  99999*************54444333678999***********975.544.899**************9...9******999999999559999999 PP

     Rap_GAP  181 lertr 185 
                  l++++
  EPX71342.1 1290 LRQLK 1294
                  99986 PP

>> Tuberin  Tuberin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.2      0.31   1.9e+03      25      95 ..     229     300 ..     222     319 .. 0.49
   2 !   92.8   3.1   3.8e-30   2.3e-26     122     351 ..     670     916 ..     552     917 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.31
     Tuberin  25 psshavkvyklLvehlelhYerpkkfeevv....assirlkifdflLklradssyrlglpdkedkvvrfspyllv 95 
                 p+s + ++  +L +   + ++ +k  ++vv     s+i  ++f++++ +  + + ++       ++vr   ++++
  EPX71342.1 229 PASSVNEIVIILCSAFVSTFSYSKLANSVVvnlfQSHISHTVFEVIVDILRNLRTNVNAV---RGAVRLMRFFVL 300
                 555555555555555555444444444333000034444444444444444433333333...333555555555 PP

  == domain 2  score: 92.8 bits;  conditional E-value: 3.8e-30
     Tuberin 122 tqtpsskvttlsikeafkvilkclkeekdwkvLklvLkelpklLqnkaLilsksgndidsLasaLcklvsdkklsekLkstpekfsrtdlqalvlpvLa 220
                 +++ ++ + t++  +++ +    + +e++w+++   +++ p+ L n++L++ +   +i+ ++s  c ++s++        +pe ++++ ++   l+   
  EPX71342.1 670 DESGKVTLFTFPATSLLDAYRDIVLKETEWNMFSFFITHFPDQLSNRSLFIQS-ILQIRDIVSIFCGMISERVSF--PAAVPEDIRKAHIMIPLLQGAL 765
                 34566667777888888888899999***********************9954.567*************99887..4567788777776655544333 PP

     Tuberin 221 alvsYhesLdkstqqelvkclesglksk..cakqcvvalticllemrdvlikllpevllkLskisatvtlAipvLefLstLvrlpklysnfveeqymsv 317
                     Y  ++ + ++ elv+++  gl ++    + c+ al +c+ em+  + k lp++l +Ls++     l + +LefLs+L rlp l++nf+  ++++v
  EPX71342.1 766 MSFGYLDNFTRAEKDELVNAFLPGLEKRneVCHICIHALLLCCYEMPVSISKHLPAILTRLSRLITKSDLSVHILEFLSSLARLPDLIANFTDADFRQV 864
                 33458899999**************999445799***************************************************************** PP

     Tuberin 318 faillpytnpf..................kydhYiVslahhviavWFlkcrl 351
                 f ++l y++ +                   y+ Y+ +la++++ vWFl  r+
  EPX71342.1 865 FGVSLKYIQHYnvtksgnsqtddtavikqSYSSYVLALAYNILQVWFLSVRI 916
                 ******986542222222233333333336******************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1331 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       676  (0.0377043); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.85u 0.27s 00:00:01.12 Elapsed: 00:00:00.47
# Mc/sec: 8593.05
//
Query:       EPX71343.1  [L=420]
Description: ER lipid phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.4e-12   47.8   0.4    3.5e-12   47.3   0.4    1.3  1  Metallophos  Calcineurin-like phosphoesterase
  ------ inclusion threshold ------
      0.026   13.3   0.0       0.04   12.7   0.0    1.1  1  BshC         Bacillithiol biosynthesis BshC


Domain annotation for each model (and alignments):
>> Metallophos  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.3   0.4   3.9e-16   3.5e-12       1     204 []      46     274 ..      46     274 .. 0.68

  Alignments for each domain:
  == domain 1  score: 47.3 bits;  conditional E-value: 3.9e-16
                  EEEEEEESBTB..TTCCTHHHHHHHHHHHH............HHHTTESEEEEESTSSSSS..........HHHHHHHHHHHHHHHHTSEEEEEC-TT CS
  Metallophos   1 lrilvigDlHl..algggqlddllkllddl............lreekpdlvllaGDlvdrg..........dlekellellaalvkypipvylllGNH 74 
                  +++++++D+++  + ++   + ll+l++ +            +++ kpdl ++ GDl d+g          dle  +++ +++  +   +v + +GNH
   EPX71343.1  46 FHVALVADPQIvdNGTYSYPRPLLRLVQFIadqflfrhwrylHKKLKPDLTIIMGDLMDTGrefnrdewkqDLER-FNRIFDFNAA--EHVEVYPGNH 140
                  67999*****997444444444555554443334555555556668******************99966666666.6666666666..799******* PP

                  S.CHHH.HHHHHHHHHHHH.HHHHEHHHCEEETSEEEEEETTE.EEEEEEESECEEETHHHHHHHHHHHSCHHHHCCHHHHHHHHHHTTCSEEEEEES CS
  Metallophos  75 e.gfee.ellnkygylgif.sepwrsdaevfnnlplaslgsgs.lkvlllhGgspellvsldklgslnleleapepgdewlkdlekrekadwvivlgH 168
                  + gf e  + +k + ++   +++ rs       l l++ +  s +    ++G                 ++ +     +++++  ++e   + i++gH
   EPX71343.1 141 DiGFGEkTYYEKIKTFESIyGPTSRSVIAGNHTLALVDGIRLSnTLSPDVYGK----------------PRSY----LDFFNK--DKESSSPAILFGH 216
                  *7554444444433222221222222222222222222111112233344444................2222....788888..9************ PP

                  SESS......................CSSSCSCCHHHHHHHHHHTTESEEEEESSSSE CS
  Metallophos 169 sply......................rgsgylfgdealedllkkygvdlvisGHtHvy 204
                  +ply                      ++++++ + e  e++lk+  + + + G++H y
   EPX71343.1 217 VPLYrpdgtscgklreqkdtisfgygYQYQNVLSKELSEKILKDVMPIAAFAGDDHDY 274
                  ********99999999999999999999999999999999999999**********86 PP

>> BshC  Bacillithiol biosynthesis BshC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   4.5e-06      0.04     116     159 ..     249     291 ..     248     314 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 4.5e-06
                 HHHHHHHHH.-S-EEEEEEE-TT---GGGTSEEEEEETEEEEE. CS
        BshC 116 lakelkeklpeynfVPvfWiatEDHDfeEinhvnlegegelkkl 159
                 l+kel+ek+  +++ P+   a++DHD+ E+ h ++ + g++k++
  EPX71343.1 249 LSKELSEKI-LKDVMPIAAFAGDDHDYCEVVHSYTDDYGSVKEV 291
                 7899****9.9***********************9987777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (420 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       610  (0.0340231); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 2857.68
//
Query:       EPX71344.1  [L=128]
Description: vacuolar sorting protein Vps55 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.6e-34  115.9   6.1    1.1e-33  115.6   6.1    1.0  1  Vps55     Vacuolar protein sorting 55
  ------ inclusion threshold ------
        4.5    7.0   9.7       0.22   11.2   1.5    2.5  2  DUF3149   Protein of unknown function (DUF3149)


Domain annotation for each model (and alignments):
>> Vps55  Vacuolar protein sorting 55
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.6   6.1   1.2e-37   1.1e-33       1     115 [.       7     123 ..       7     125 .. 0.96

  Alignments for each domain:
  == domain 1  score: 115.6 bits;  conditional E-value: 1.2e-37
       Vps55   1 iillsfvlaiGfllvilsCalyknwwpLlvvlfyllaplPnliakrlsssed..seessalkdlakFltgvlvvsgiaLpivLahagiikwgalilsla 97 
                 ii+ls vlaiGf+lvils+aly+nw+pLl+v+++llaplP l+++r+sss+d  +ee+++l d+++F+ g+++ +g+aLpiv+ + ++ +  a ++s++
  EPX71344.1   7 IIGLSSVLAIGFMLVILSGALYRNWFPLLIVIPFLLAPLPQLLTERYSSSHDflQEEDRNLLDFGRFVFGAIISTGFALPIVFINVSLTNIPASVMSCI 105
                 8***********************************************9997654899***************************************** PP

       Vps55  98 ggvviyltiivfflffke 115
                 gg++i++ i +++ +f  
  EPX71344.1 106 GGFIIFMVITIYSQAFAA 123
                 *************99976 PP

>> DUF3149  Protein of unknown function (DUF3149)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   1.5   2.5e-05      0.22       9      25 ..       8      24 ..       2      27 .. 0.90
   2 ?   -0.4   1.5       0.1     9e+02      21      30 ..     103     112 ..     100     123 .. 0.61

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 2.5e-05
     DUF3149  9 vGLlSliVIvftigmga 25
                +GL S++ I f++++ +
  EPX71344.1  8 IGLSSVLAIGFMLVILS 24
                8*************975 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.1
     DUF3149  21 igmgaffiry 30 
                  ++g+f+i +
  EPX71344.1 103 SCIGGFIIFM 112
                 4555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       765  (0.0426683); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 967.65
//
Query:       EPX71345.1  [L=273]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.5e-69  231.6   0.0    1.2e-68  231.3   0.0    1.1  1  Bmt2      25S rRNA (adenine(2142)-N(1))-methyltransferase, Bm
  ------ inclusion threshold ------
       0.17   10.4   0.0       0.43    9.1   0.0    1.6  2  GshA      Glutamate-cysteine ligase


Domain annotation for each model (and alignments):
>> Bmt2  25S rRNA (adenine(2142)-N(1))-methyltransferase, Bmt2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  231.3   0.0   1.4e-72   1.2e-68       2     220 .]      54     268 ..      53     268 .. 0.94

  Alignments for each domain:
  == domain 1  score: 231.3 bits;  conditional E-value: 1.4e-72
        Bmt2   2 eieaeiealGGleaYQlaSklgqskerggdsskvlvewlkek..leelkleekklrlLevGalstknaiskvklldvtrIDLnsqekgilkqdFlerpl 98 
                 ++e+++ea+ G++aYQ+aS++gq++++ggdssk+lvew+++   ++ ++ +++  ++Le+G++s++n++s+++l++vtrIDL+s ++ i++qd l+r+ 
  EPX71345.1  54 HVEQQLEAI-GIDAYQKASQNGQNSQKGGDSSKILVEWIRADpsFYPKHPNNRPQQILEIGSVSVDNKCSTCGLFSVTRIDLHSSHPLIQEQDVLTRSP 151
                 578899998.9****************************9751156666677779*****************************************954 PP

        Bmt2  99 pkkeeekFdiislSLVlNfvpdaakRGemlkrvtkfLkpkkkaslsslflvLPlpCvtnSrylteerlrailsslGfelvkeketkklvyyllelkeke 197
                    +e +F+ is+SLVlNf p +++R+++l ++t++L p+++ +++++f+v+P+pCvtnSry+++ +l++i++++Gf++ +++ +kk++yyl+++++  
  EPX71345.1 152 ---KEGQFHGISCSLVLNFAP-PNTRAQILWKCTQLLLPPDPIHPPWFFFVIPAPCVTNSRYMDNATLHSIMHQFGFTVRHSSISKKIAYYLYAYDHP- 245
                 ...799***************.99************************************************************************99. PP

        Bmt2 198 eakekvfkkeelndgkkrnnFai 220
                  +++  +kk++++dg++rnnF i
  EPX71345.1 246 CTTNLSWKKKIVHDGPSRNNFFI 268
                 7789999**************98 PP

>> GshA  Glutamate-cysteine ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1      0.17   1.6e+03      52      81 ..      34      63 ..      31      68 .. 0.73
   2 ?    9.1   0.0   4.8e-05      0.43      82     122 ..     198     237 ..     195     271 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.17
                GGS-GGGHHHHHHHHHHHHHHHSTT-SEEE CS
        GshA 52 nnlnpeflplavqaaqeaiekicpeakkll 81
                n l+++++ +a+qa  ++i+++ ++ + + 
  EPX71345.1 34 NLLKEKARLTATQASAQQIQHVEQQLEAIG 63
                455666777788888888988888877765 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 4.8e-05
                 EEE-S-SS-HHHHHHHHHHHHHHHHTT-EEEEEE--TT--S CS
        GshA  82 lipEnhtrNtfYlenvaalkeilekaglevrlgsleeeite 122
                 +ip     N+ Y++n a+l++i+++ g++vr +s++++i  
  EPX71345.1 198 VIPAPCVTNSRYMDN-ATLHSIMHQFGFTVRHSSISKKIAY 237
                 67888889******9.68*****************999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (273 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       783  (0.0436723); expected 358.6 (0.02)
Passed bias filter:                      554  (0.0308997); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 1866.04
//
Query:       EPX71346.1  [L=414]
Description: phosphoglycerate kinase Pgk1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     1e-148  495.3   2.0   1.2e-148  495.2   2.0    1.0  1  PGK       Phosphoglycerate kinase
  ------ inclusion threshold ------
       0.14   12.5   0.0       0.41   11.0   0.0    1.7  1  Yqai      Hypothetical protein Yqai


Domain annotation for each model (and alignments):
>> PGK  Phosphoglycerate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  495.2   2.0  1.3e-152  1.2e-148       1     378 []       9     403 ..       9     403 .. 0.94

  Alignments for each domain:
  == domain 1  score: 495.2 bits;  conditional E-value: 1.3e-152
                 GGGS--TT-EEEEEE-----EECTTEES--HHHHHHHHHHHHHHHTT-E.EEEEE--S--TT.S-GGG-SHHHHHHHHHHHTT-EEEESSTTSHHHHHH CS
         PGK   1 vkdldlkgkrvlvRvDfNvplkkegkitddtriraalpTikyllekgak.vvllsHlgrpkg.ekeklslkpvaerLsellgkeVkfvedvvgeeveea 97 
                 ++d+dlkgk+vl+RvDfNvpl+   +it++ ri  alpTiky++e++ k v+l+sHlgrp+g + ek+s+kpvae+Ls+ll+++Vkf++d+vg+eve++
  EPX71346.1   9 ITDVDLKGKNVLMRVDFNVPLDG-DRITNNARIVGALPTIKYAIEQQPKaVILMSHLGRPNGsRVEKYSMKPVAEELSKLLNRDVKFLNDCVGPEVEKT 106
                 689******************76.9*********************9888**********99556********************************** PP

                 HHT-TTT-EEEES-GGGSTTTT..........TT-H......HHHHHHHHT-SEEEE--GGGTTS--TTTTHHHHCSEEEE-HHHHHHHHHHHHHHHS- CS
         PGK  98 iaelkegevllLeNvrfykeEe..........knde......elakklasladvyVnDAFgtahrahaStvgiakvlsaaaGllmekElealskvlenp 180
                 ++e+++g+v+lLeN+rf+ eEe          k  +      +++k+l+sl+d++VnDAFgtahrah+S+vg++k   ++ G+lm+kEl++++k+lenp
  EPX71346.1 107 CKEANNGQVILLENLRFHIEEEgsakvdgnkvK--AdsasveSFRKSLTSLGDIFVNDAFGTAHRAHSSMVGVEKT--RVSGFLMKKELDYFAKALENP 201
                 *********************966666655542..03344445*******************************99..59******************* PP

                 -SSEEEEEEES-HHHCHHHHHHHTTT-SEEEEETCHHHHHHHH.TT-B-TTSS--GGGHHHHHHHHHHHHHHT-EEE--SEEEEESS.S.STTS.EEEE CS
         PGK 181 erplvailGGakvsdkikvienLlekvdkliigGgmantFlka.qgleigkslveedklelakellekakkkgvkillpvDvvvake.e.aekeakvve 276
                 +rp++ailGGakv+dki++i+nLl+kv++lii+Ggm +tFlk+ ++++ig+sl++e   + ++ ++ekakk++v+i+lpvD+v+a++ +  ++++++ +
  EPX71346.1 202 ARPFLAILGGAKVADKIQLIDNLLDKVNRLIICGGMSFTFLKVlKNMKIGDSLFDEAGSKNVQGMIEKAKKNNVEIFLPVDFVTADKfDkDANTGSANA 300
                 *******************************************9******************************************9533344478889 PP

                 CCG--TT-EEEEE-HHHHHHHHHHHCC-SEEEEES-SS-TTSGCCCHHHHHHHHHHHHHCH.TSEEEEESHHHHHHHHHTT-GGGSSEEESSSHHHHHH CS
         PGK 277 veaipedemalDigpktielfaeaikeaktvvwnGpmGvfeiekfakGTkaiakalaeatk.galsivGGgdsaaaveklgladkvshvStGGgAsLel 374
                 +e ip+++m+lD+++++ ++f e+i+++kt+vwnGp+Gvfe+ekfa+GTk++++ + ++ k g  +i+GGgd+a+a+ k+g +++vshvStGGgAsLel
  EPX71346.1 301 EEGIPDGWMGLDCSTQSSKQFDEVIQSSKTIVWNGPAGVFEFEKFATGTKTMLDSCVKSAKaGNAVIIGGGDTATAAVKYGKENEVSHVSTGGGASLEL 399
                 999*****************************************************99988899*********************************** PP

                 HCTS CS
         PGK 375 Legk 378
                 Legk
  EPX71346.1 400 LEGK 403
                 ***8 PP

>> Yqai  Hypothetical protein Yqai
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   4.6e-05      0.41       5      61 ..      77     131 ..      75     135 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 4.6e-05
                 SS------SS-S-SS-B.-.-TTSS-B-TTS-EEE.ETTEEEECCCHHHHHHHTTTEE CS
        Yqai   5 mtvcnecaskqterevkmi.DayGdEivpddeyllfdngeiilkeNiyrYliealGak 61 
                 m+ ++e  sk+ +r+vk + D  G E+    +  + +ng++il eN+   + e+ G+ 
  EPX71346.1  77 MKPVAEELSKLLNRDVKFLnDCVGPEVE--KTCKEANNGQVILLENLRFHIEEE-GSA 131
                 556777789********86689999984..578899**********96655555.765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (414 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       565  (0.0315132); expected 358.6 (0.02)
Passed bias filter:                      471  (0.0262703); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 2995.02
//
Query:       EPX71347.1  [L=1067]
Description: karyopherin Kap123 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.9e-23   80.5   4.5    0.00013   21.9   0.3   10.4 10  HEAT           HEAT repeat
    3.5e-23   81.7   1.8    0.00013   22.3   0.1    8.8  8  HEAT_EZ        HEAT-like repeat
    1.2e-16   60.9   1.2      0.012   16.0   0.0    7.5  9  HEAT_2         HEAT repeats
    2.1e-12   46.8   0.5    1.1e-10   41.2   0.1    3.2  2  IBN_N          Importin-beta N-terminal domain
    1.4e-09   38.4   1.2       0.31   11.7   0.0    6.3  7  Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
    1.5e-08   34.2   4.1    0.00018   20.8   0.0    4.4  5  MMS19_C        RNAPII transcription regulator C-terminal
    6.5e-08   32.4   0.0          1    9.3   0.0    5.1  4  UME            UME (NUC010) domain
    8.7e-07   29.1   0.4       0.66   10.0   0.0    4.8  4  Cnd1           non-SMC mitotic condensation complex subunit 1
    1.1e-06   27.5   2.9       0.25    9.8   0.0    4.7  3  Adaptin_N      Adaptin N terminal region
     0.0014   18.2   0.2         11    5.5   0.0    5.1  5  CLASP_N        CLASP N terminal
     0.0015   18.7   1.2        2.7    8.2   0.0    4.1  4  RTP1_C1        Required for nuclear transport of RNA pol II C
  ------ inclusion threshold ------
      0.015   15.9   0.1        1.9    9.1   0.0    4.3  5  Ipi1_N         Rix1 complex component involved in 60S ribosom


Domain annotation for each model (and alignments):
>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.0   7.3e-05      0.11       4      30 ..     127     153 ..     124     154 .. 0.90
   2 !    8.8   0.0    0.0014       2.1       4      31 .]     167     194 ..     164     194 .. 0.86
   3 ?    5.9   0.0     0.012        18       2      29 ..     344     371 ..     343     373 .. 0.86
   4 !   21.9   0.3   8.9e-08   0.00013       1      28 [.     384     411 ..     384     412 .. 0.97
   5 ?   -0.6   0.0       1.5   2.3e+03      18      30 ..     442     454 ..     425     455 .. 0.79
   6 ?   -1.1   0.1       2.3   3.4e+03       1      26 [.     467     493 ..     467     495 .. 0.85
   7 ?   -2.5   0.0       6.3   9.4e+03       1      12 [.     596     608 ..     596     610 .. 0.85
   8 ?    1.8   0.0      0.26   3.9e+02      18      30 ..     657     669 ..     656     670 .. 0.86
   9 ?    1.7   0.0      0.27     4e+02       2      28 ..     855     881 ..     854     884 .. 0.75
  10 !   15.8   0.0   8.2e-06     0.012       3      30 ..     897     924 ..     895     925 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 7.3e-05
                 HHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   4 lllkllsDpspeVReaAakaLgalaev 30 
                 +l+++ +Dp+ ++Re+A++ L  +ae 
  EPX71347.1 127 FLVQAAMDPNDSIREMAIYVLYSIAET 153
                 578889******************985 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.0014
                 HHHHHHT-SSHHHHHHHHHHHHHHHHCS CS
        HEAT   4 lllkllsDpspeVReaAakaLgalaevl 31 
                 l+ + ++D+s  VR ++++ Lga+aevl
  EPX71347.1 167 LFSRTITDSSRTVRVTSVQGLGAVAEVL 194
                 5556679******************985 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.012
                 HHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgalae 29 
                 + ++++  ++p+p  R+aA++++g  +e
  EPX71347.1 344 MEAIMTFSQSPEPGHRKAALLSIGVAVE 371
                 67888989***************98666 PP

  == domain 4  score: 21.9 bits;  conditional E-value: 8.9e-08
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgala 28 
                 ++Pl+++ l+D +++VR+aA++aL ++a
  EPX71347.1 384 IFPLIVNGLCDVDMNVRQAALLALSQIA 411
                 78************************97 PP

  == domain 5  score: -0.6 bits;  conditional E-value: 1.5
                 HHHHHHHHHHHHC CS
        HEAT  18 eaAakaLgalaev 30 
                 ++A++++ al+e+
  EPX71347.1 442 KSACNCIDALLEG 454
                 6899999999987 PP

  == domain 6  score: -1.1 bits;  conditional E-value: 2.3
                 HHHHHHHHH.T-SSHHHHHHHHHHHHH CS
        HEAT   1 llPlllkll.sDpspeVReaAakaLga 26 
                 l+  l+ ll s   p++ + +a a+g 
  EPX71347.1 467 LMERLVGLLdSNVTPDIKSCVAAAIGS 493
                 688899999777999999999999985 PP

  == domain 7  score: -2.5 bits;  conditional E-value: 6.3
                 HHHHHHHHH.T-S CS
        HEAT   1 llPlllkll.sDp 12 
                 ++P+l k l +D+
  EPX71347.1 596 IVPALFKSLdQDE 608
                 79******98886 PP

  == domain 8  score: 1.8 bits;  conditional E-value: 0.26
                 HHHHHHHHHHHHC CS
        HEAT  18 eaAakaLgalaev 30 
                 e Aa aLg+++ +
  EPX71347.1 657 EIAADALGEICTY 669
                 679********86 PP

  == domain 9  score: 1.7 bits;  conditional E-value: 0.27
                 HHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgala 28 
                 +P+++k  s+++   R++A+ ++g++a
  EPX71347.1 855 FPHIVKYYSSNNGTERAMAVACIGEVA 881
                 577777666666666*********987 PP

  == domain 10  score: 15.8 bits;  conditional E-value: 8.2e-06
                 HHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   3 PlllkllsDpspeVReaAakaLgalaev 30 
                  l++++l+Dp+ eVR++Aa+++g l+++
  EPX71347.1 897 TLFMTALEDPEGEVRSNAAYSMGLLCQF 924
                 57999*********************96 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.0   0.0    0.0056       8.4      31      54 ..     126     149 ..     122     150 .. 0.87
   2 ?    3.9   0.0     0.054        80      21      54 ..     156     189 ..     151     190 .. 0.87
   3 !   22.3   0.1     9e-08   0.00013       4      55 .]     359     410 ..     356     410 .. 0.95
   4 ?    2.6   0.0      0.14   2.1e+02       6      39 ..     443     477 ..     442     480 .. 0.86
   5 !   12.2   0.0   0.00013       0.2       7      55 .]     487     539 ..     481     539 .. 0.93
   6 ?    4.4   0.0     0.036        54      14      44 ..     581     611 ..     569     615 .. 0.79
   7 ?    0.7   0.0      0.52   7.7e+02       3      34 ..     655     683 ..     653     689 .. 0.60
   8 !   16.7   0.0   5.4e-06    0.0081       3      52 ..     869     918 ..     868     921 .. 0.94

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0056
     HEAT_EZ  31 paLlalLnddsdeVRaaAagaLgn 54 
                  +L+++ +d++d++R+ A++ L  
  EPX71347.1 126 GFLVQAAMDPNDSIREMAIYVLYS 149
                 5899***************99876 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.054
     HEAT_EZ  21 llqplvpeilpaLlalLnddsdeVRaaAagaLgn 54 
                 l+++l+ + + ++ ++ +d+s +VR +++  Lg+
  EPX71347.1 156 LDSKLLLDFVHLFSRTITDSSRTVRVTSVQGLGA 189
                 566777889999999***************9997 PP

  == domain 3  score: 22.3 bits;  conditional E-value: 9e-08
     HEAT_EZ   4 RraAawaLGrlaggepellqplvpeilpaLlalLnddsdeVRaaAagaLgnl 55 
                 R aA++ +G + +g +e ++  +p i p+ +++L+d + +VR+aA+ aL+++
  EPX71347.1 359 RKAALLSIGVAVEGSSESVASSLPNIFPLIVNGLCDVDMNVRQAALLALSQI 410
                 99*********************************9888***********97 PP

  == domain 4  score: 2.6 bits;  conditional E-value: 0.14
     HEAT_EZ   6 aAawaLGr.laggepellqplvpeilpaLlalLnd 39 
                 +A++++ + l+g  +  +++++p ++  L+ lL +
  EPX71347.1 443 SACNCIDAlLEGLDRSEISGYLPMLMERLVGLLDS 477
                 68889988888888888*************99955 PP

  == domain 5  score: 12.2 bits;  conditional E-value: 0.00013
     HEAT_EZ   7 AawaLGrlaggepellqplvpeilpaLlalL.nddsd...eVRaaAagaLgnl 55 
                 +a+a+G++a+ + e+  p+ ++ ++ L ++L ++d+d   e R+++  +Lg++
  EPX71347.1 487 VAAAIGSAAFAAQEDFLPYFERTMASLSNCLhTSDDDegyELRGTVMDTLGAI 539
                 688*****************************9999999999********987 PP

  == domain 6  score: 4.4 bits;  conditional E-value: 0.036
     HEAT_EZ  14 laggepellqplvpeilpaLlalLnddsdeV 44 
                 la + +e  +p++p i+paL + L  d+ +V
  EPX71347.1 581 LARVYKEEFAPFLPHIVPALFKSLDQDETDV 611
                 3466778889**************7766555 PP

  == domain 7  score: 0.7 bits;  conditional E-value: 0.52
     HEAT_EZ   3 vRraAawaLGrlaggepellqplvpeilpaLl 34 
                 +++ Aa aLG   + +    +p+ + + p   
  EPX71347.1 655 EKEIAADALG---EICTYVGAPFAEYLEPTVE 683
                 5788999**9...5555555555544444433 PP

  == domain 8  score: 16.7 bits;  conditional E-value: 5.4e-06
     HEAT_EZ   3 vRraAawaLGrlaggepellqplvpeilpaLlalLnddsdeVRaaAagaL 52 
                 +R+ A++++G++agg   ++ p+  ++  +++ +L+d++ eVR +Aa+  
  EPX71347.1 869 ERAMAVACIGEVAGGIESAITPFTADVFTLFMTALEDPEGEVRSNAAYSM 918
                 6999******************************************9865 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.0   0.00015      0.23       8      82 ..      16     103 ..       8     112 .. 0.73
   2 !   11.6   0.0   0.00018      0.27       4      73 ..     128     207 ..     124     214 .. 0.85
   3 ?    4.4   0.0     0.034        50      11      58 ..     317     370 ..     307     381 .. 0.70
   4 !   16.0   0.0   7.7e-06     0.012      10      59 ..     352     411 ..     344     434 .. 0.82
   5 ?   -1.1   0.0       1.7   2.5e+03      33      73 ..     468     519 ..     439     526 .. 0.55
   6 ?    0.8   0.0      0.43   6.4e+02      31      60 ..     508     541 ..     468     558 .. 0.63
   7 ?   -2.2   0.0       3.7   5.5e+03      31      47 ..     595     611 ..     592     646 .. 0.79
   8 !    9.6   0.0    0.0008       1.2       8      58 ..     862     921 ..     855     947 .. 0.71
   9 ?   -3.1   0.0       7.4   1.1e+04      13      40 ..    1034    1066 ..    1031    1067 .] 0.71

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00015
      HEAT_2   8 lendpdpevrraairaLg..rignpealpaLvell.ededpavRraaaeaLgai......g.....dpealpaLkellddddddvvRea 82 
                   + pd+    +a raL    +++p+al  L+ ++ ++e+  vR+ aa  + ++      +      +++ + L+e+   +++ +vR a
  EPX71347.1  16 S-TAPDTTQITEATRALEtkYLKEPSALLSLLHIMaTCENFQVRQLAAIEARKLchkywpDvpadvQNQVRANLLEITIKEPEGIVRHA 103
                 2.4555555569******87789999988888877799**********99998855444414333337789999999999999999987 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 0.00018
      HEAT_2   4 LlqalendpdpevrraairaLgrignp.........ealpaLvellededpavRraaaeaLgaigd..pealpaLkelldd 73 
                 L+qa+  dp++ +r +ai +L +i+++         + + ++ + ++d+++ vR + ++ Lga+++  +++ + L+++++d
  EPX71347.1 128 LVQAA-MDPNDSIREMAIYVLYSIAETvdldsklllDFVHLFSRTITDSSRTVRVTSVQGLGAVAEvlESDDKKLLHAYRD 207
                 77888.8***************999988888877777799999999******************95557777777777665 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.034
      HEAT_2  11 dpdpevrraairaLgrignpea.....lpaLvellededpavRraaaeaLg.ai 58 
                 d    ++ +ai+ L +  +p+      ++a+  + ++++p  R+aa  ++g a+
  EPX71347.1 317 DCPARLALRAIDLLSTHLSPTQvfypmMEAIMTFSQSPEPGHRKAALLSIGvAV 370
                 333446678899999766664447666888888889***********9998444 PP

  == domain 4  score: 16.0 bits;  conditional E-value: 7.7e-06
      HEAT_2  10 ndpdpevrraairaLg..........rignpealpaLvellededpavRraaaeaLgaig 59 
                 ++p+p  r+aa+ ++g              p ++p++v+ l d d++vR+aa  aL++i+
  EPX71347.1 352 QSPEPGHRKAALLSIGvavegssesvASSLPNIFPLIVNGLCDVDMNVRQAALLALSQIA 411
                 689999**********99987776333334688************************996 PP

  == domain 5  score: -1.1 bits;  conditional E-value: 1.7
      HEAT_2  33 lpaLvelleded..pavRraaaeaLg..aig.d.......pealpaLkelldd 73 
                 ++ Lv ll++ +  p++   +a a+g  a++         +++ ++L  +l++
  EPX71347.1 468 MERLVGLLDS-NvtPDIKSCVAAAIGsaAFAaQedflpyfERTMASLSNCLHT 519
                 4555555533.224777777777776333322311223334455555555555 PP

  == domain 6  score: 0.8 bits;  conditional E-value: 0.43
      HEAT_2  31 ealpaLvell..eded..pavRraaaeaLgaigd 60 
                 ++++ L ++l  +d+d   + R ++ ++Lgai++
  EPX71347.1 508 RTMASLSNCLhtSDDDegYELRGTVMDTLGAIAN 541
                 5556666666544444335788899999988853 PP

  == domain 7  score: -2.2 bits;  conditional E-value: 3.7
      HEAT_2  31 ealpaLvellededpav 47 
                  ++paL++ l+ ++++v
  EPX71347.1 595 HIVPALFKSLDQDETDV 611
                 56888888885555554 PP

  == domain 8  score: 9.6 bits;  conditional E-value: 0.0008
      HEAT_2   8 lendpdpevrraairaLg....rignp......ealpaLvellededpavRraaaeaLgai 58 
                   ++ +   r++a+ ++g     i +       +++ ++  +led++ +vR +aa ++g +
  EPX71347.1 862 Y-SSNNGTERAMAVACIGevagGIESAitpftaDVFTLFMTALEDPEGEVRSNAAYSMGLL 921
                 5.56666778999999995555333335567778899999999************999954 PP

  == domain 9  score: -3.1 bits;  conditional E-value: 7.4
      HEAT_2   13 dpevrraairaLgrignp.....ealpaLvell 40  
                  ++e+r + i  L +i+++     +++p Lv ll
  EPX71347.1 1034 NDELRTQLINLLKEIAPEyqtliSTFPHLVALL 1066
                  567888888888888877666666677777666 PP

>> IBN_N  Importin-beta N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.2   0.1   7.6e-14   1.1e-10       2      73 ..      28      93 ..      27      94 .. 0.92
   2 ?    2.0   0.0      0.13   1.9e+02      25      40 ..     393     408 ..     378     410 .. 0.82

  Alignments for each domain:
  == domain 1  score: 41.2 bits;  conditional E-value: 7.6e-14
                HHHHH.HHHCSTCHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHHHHGGSCCCHCGSXHHHHHHHHHHHHHHHH CS
       IBN_N  2 ekqLk.qlekqpgflsallqilanseselevRqlAalyLknlitkhWsdeeekqslpseekeqIrnnllnllg 73
                +++L+ +  k+p +l++ll+i+a++e+  +vRqlAa+  ++l++k+W+       +p+++++q+r nll+  +
  EPX71347.1 28 TRALEtKYLKEPSALLSLLHIMATCENF-QVRQLAAIEARKLCHKYWP------DVPADVQNQVRANLLEITI 93
                6677767778******************.*******************......***************9765 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.13
                 TTSHHHHHHHHHHHHH CS
       IBN_N  25 seselevRqlAalyLk 40 
                 ++ +++vRq+A+l L 
  EPX71347.1 393 CDVDMNVRQAALLALS 408
                 56789*******9985 PP

>> Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.1     0.019        28      31      86 ..     127     181 ..     118     188 .. 0.77
   2 !    6.5   0.0    0.0082        12      47      88 ..     362     403 ..     322     405 .. 0.69
   3 !   11.7   0.0   0.00021      0.31       7      95 ..     363     452 ..     357     454 .. 0.67
   4 !   10.1   0.0   0.00064      0.95       1      52 [.     398     449 ..     398     490 .. 0.81
   5 ?    3.8   0.0     0.057        85       8      84 ..     534     611 ..     527     622 .. 0.83
   6 ?   -3.0   0.0       7.8   1.2e+04      45      60 ..     756     771 ..     726     805 .. 0.51
   7 !    8.8   0.0    0.0017       2.5      12      89 ..     838     915 ..     832     945 .. 0.74

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.019
  Vac14_Fab1_bd  31 pvlkcfsDkdsrvRyyacEslyniakvak..gevlkllneifdalvklvaDsdesvks 86 
                     ++++  D ++ +R  a+  ly ia ++   +++l  + ++f   ++ ++Ds + v+ 
     EPX71347.1 127 FLVQAAMDPNDSIREMAIYVLYSIAETVDldSKLLLDFVHLF---SRTITDSSRTVRV 181
                    5789999******************99761145555555555...6778888888885 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0082
  Vac14_Fab1_bd  47 acEslyniakvakgevlkllneifdalvklvaDsdesvksga 88 
                    a  s+   +  + ++v + l +if  +v+ ++D+d +v+++a
     EPX71347.1 362 ALLSIGVAVEGSSESVASSLPNIFPLIVNGLCDVDMNVRQAA 403
                    555555555556677888899999999999999999999987 PP

  == domain 3  score: 11.7 bits;  conditional E-value: 0.00021
  Vac14_Fab1_bd   7 ligLaavaialekk...ikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalvklvaDsdesv.ksgaelldrll 95 
                    l    ++ +a+e +   +++ l +i + +++ + D d  vR  a  +l  ia  +  ev k+  + +  +++l++ +  +v ks+ +++d ll
     EPX71347.1 363 L---LSIGVAVEGSsesVASSLPNIFPLIVNGLCDVDMNVRQAALLALSQIAVEIPMEVSKHHAQFLPLVFELMSTQGVKVgKSACNCIDALL 452
                    3...34444444333347777788888888888888888888888888888888888888888887777777777777777455566666665 PP

  == domain 4  score: 10.1 bits;  conditional E-value: 0.00064
  Vac14_Fab1_bd   1 narkggligLaavaialekkikeyleeivkpvlkcfsDkdsrvRyyacEsly 52 
                    n r+++l++L  +a+ +  +++++  ++++ v++ +s +  +v   ac ++ 
     EPX71347.1 398 NVRQAALLALSQIAVEIPMEVSKHHAQFLPLVFELMSTQGVKVGKSACNCID 449
                    5699***********************************9999999998765 PP

  == domain 5  score: 3.8 bits;  conditional E-value: 0.057
  Vac14_Fab1_bd   8 igLaavaialekk.ikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalvklvaDsdesv 84 
                     +L a+a a++k+   +++e++++   + ++ + sr+R  +      +a+v k+e+  +l +i  al+k +   +++v
     EPX71347.1 534 DTLGAIANAVGKQaFLPFTEQLIQLAYEGIQIDHSRLRECSFCFYAVLARVYKEEFAPFLPHIVPALFKSLDQDETDV 611
                    47899999999998899**************99****9776644445689*************999999876666665 PP

  == domain 6  score: -3.0 bits;  conditional E-value: 7.8
  Vac14_Fab1_bd  45 yyacEslyniakvakg 60 
                      a++ l n+a ++k+
     EPX71347.1 756 TVATDILRNLAEAIKT 771
                    3344444444444444 PP

  == domain 7  score: 8.8 bits;  conditional E-value: 0.0017
  Vac14_Fab1_bd  12 avaialekkikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalvklvaDsdesvksgae 89 
                    a+++al+++  e ++ + + ++k+ s ++   R  a+ ++  +a  +++++  +  ++f+ ++  + D + +v+s a+
     EPX71347.1 838 ALSMALAESFVESFQVFFPHIVKYYSSNNGTERAMAVACIGEVAGGIESAITPFTADVFTLFMTALEDPEGEVRSNAA 915
                    556777777777777777777777777777777777777777777777777777777777777777777777777665 PP

>> MMS19_C  RNAPII transcription regulator C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1       1.5   2.3e+03      38     106 ..     248     312 ..     210     356 .. 0.58
   2 !   20.8   0.0   1.2e-07   0.00018     333     421 ..     384     472 ..     380     474 .. 0.92
   3 ?   -2.9   0.0       1.8   2.7e+03     378     417 ..     512     556 ..     502     558 .. 0.78
   4 !    5.5   0.0     0.005       7.5     359     392 ..     580     613 ..     574     618 .. 0.89
   5 ?    3.9   2.2     0.016        24     331     413 ..     974    1062 ..     888    1067 .] 0.74

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 1.5
     MMS19_C  38 tlvirllnkldlvlksnessaayahailstllkllekkqtdlekeellnsyydrivprlltlvvsaast 106
                   +  +++ +  +++sn+   +   + ls ++++++ k  +l    ++ ++ ++++ +l++++++ +++
  EPX71347.1 248 KALGNIIELIIGISTSNQIDDEIRCMALSFIISCIRFKSRKL----QALKLGKSLILSLMQVATEETTE 312
                 444444444444444444333444477777777777777333....56677777777777776666654 PP

  == domain 2  score: 20.8 bits;  conditional E-value: 1.2e-07
     MMS19_C 333 vlpklvegfkssdsetkenyLvALshllkhvPkslllpeLptLlPlLlqaLdlpdaevkastLetlksile.espslvsehlssLvprLL 421
                 ++p++v+g  + d++ +++ L ALs++   +P ++  ++  ++lPl+ + ++++  +v +s+ +++ ++le  + s +s +l  L +rL+
  EPX71347.1 384 IFPLIVNGLCDVDMNVRQAALLALSQIAVEIPMEVSKHH-AQFLPLVFELMSTQGVKVGKSACNCIDALLEgLDRSEISGYLPMLMERLV 472
                 89********************************98888.689****************************6558888889999999986 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 1.8
     MMS19_C 378 lLlqaLdlpdae....vkastLetlksile.espslvsehlssLv 417
                  L ++L+++d++    ++  +++tl +i++   ++++ +++++L+
  EPX71347.1 512 SLSNCLHTSDDDegyeLRGTVMDTLGAIANaVGKQAFLPFTEQLI 556
                 577889888888888899999999999999666888888888887 PP

  == domain 4  score: 5.5 bits;  conditional E-value: 0.005
     MMS19_C 359 llkhvPkslllpeLptLlPlLlqaLdlpdaevka 392
                 +l+ v k+   p+Lp ++P L ++Ld ++++v +
  EPX71347.1 580 VLARVYKEEFAPFLPHIVPALFKSLDQDETDVLS 613
                 78888899999******************99875 PP

  == domain 5  score: 3.9 bits;  conditional E-value: 0.016
     MMS19_C  331 stvlpklvegfkssdsetkenyLvALshllkhvPkslllpeLptLlPlLlqaLdlpdae....vkastLetlksileespslvse..hl 413 
                  ++vlp l+++   +++   ++ L+ + + l    + +ll++L +L+P+    L+ p ++    +++  ++ lk+i+ e ++l+s   hl
  EPX71347.1  974 DQVLPILLSKLPLKEDYLENAPLYYMILHLYRQKNPILLQHLGDLIPVFASVLTGPAEQlndeLRTQLINLLKEIAPEYQTLISTfpHL 1062
                  68999999999999999999999988889999999******************998777777799************977777764444 PP

>> UME  UME (NUC010) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0      0.16   2.4e+02       7      79 ..     162     239 ..     158     260 .. 0.79
   2 !    6.4   0.0    0.0055       8.2      19      64 ..     349     414 ..     338     472 .. 0.63
   3 !    9.3   0.0    0.0007         1       5     100 ..     505     602 ..     502     604 .. 0.86
   4 !    8.0   0.0    0.0018       2.7       6      71 ..     847     914 ..     842     935 .. 0.80

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.16
         UME   7 lgiltrlseklndshgkkslaekkraikaleeliklagss.......issalpqimacLqsalei..delrsaalsvWatll 79 
                 l ++  +s+++ ds+       +  ++++l+++ ++++s         +  lp ++ +Lq+ ++   ++ ++  ++v++t+l
  EPX71347.1 162 LDFVHLFSRTITDSSRT----VRVTSVQGLGAVAEVLESDdkkllhaYRDTLPSMLMVLQDVVQVgdEDACKTVFDVFNTFL 239
                 55667788888666554....5888999999999999998888999899999999******999866799999999999998 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0055
         UME  19 dshgkkslaekkraikaleeliklagssissalpqi....................macLqsalei 64 
                 +++++ ++ ++k a+ ++++ ++  ++s++s lp i                    +a+ q+a+ei
  EPX71347.1 349 TFSQSPEPGHRKAALLSIGVAVEGSSESVASSLPNIfplivnglcdvdmnvrqaalLALSQIAVEI 414
                 4555557889************************99444444444444444444444444444444 PP

  == domain 3  score: 9.3 bits;  conditional E-value: 0.0007
         UME   5 hilgiltrlseklndshgkkslaekkraikaleeliklagss.issalpqimacLqsalei..delrsaalsvWatllsnlededleplleqtfalivq 100
                 ++   +++ls+ l++s+  + ++ +  ++  l+++ + +g++   ++  q++ +   +++i    lr++++  +a+l++   +e++ p+l++++ ++++
  EPX71347.1 505 YFERTMASLSNCLHTSDDDEGYELRGTVMDTLGAIANAVGKQaFLPFTEQLIQLAYEGIQIdhSRLRECSFCFYAVLARVY-KEEFAPFLPHIVPALFK 602
                 6667899********************************9997899*****999999998843599999999998888765.67899999999988876 PP

  == domain 4  score: 8.0 bits;  conditional E-value: 0.0018
         UME   6 ilgiltrlseklndshgkkslaekkraikaleeliklagssissalpqimacLqsaleid..elrsaa 71 
                 ++  ++ +   + +  +++   e+  a+ +++e+   ++s+i+++ + + +++++ale++  e+rs+a
  EPX71347.1 847 FVESFQVFFPHIVKYYSSNNGTERAMAVACIGEVAGGIESAITPFTADVFTLFMTALEDPegEVRSNA 914
                 5555666666666666677788*************************************623666655 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.0   0.00044      0.66      29     113 ..      92     177 ..      80     220 .. 0.73
   2 !    6.6   0.3    0.0051       7.6      28      96 ..     130     204 ..     122     308 .. 0.69
   3 !    6.6   0.0    0.0049       7.3      25     104 ..     387     471 ..     372     491 .. 0.76
   4 !    6.2   0.0    0.0063       9.4      38     105 ..     870     941 ..     833     970 .. 0.67

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00044
        Cnd1  29 rLkDedpyVRktaaivvakLilndm..vkekgflselaklleDenprVvanalaalteiseksenaiynllpdiisklsdalnecse 113
                 ++k ++  VR     v+a L + d+   k++++   l ++  D+n++++++a+++l  i+e   ++  +ll d ++ +s  +++ s+
  EPX71347.1  92 TIKEPEGIVRHAFGRVIAALAKIDLpdGKWNDLSGFLVQAAMDPNDSIREMAIYVLYSIAETV-DLDSKLLLDFVHLFSRTITDSSR 177
                 67788888999999999999555543489999999999999*******************994.34455555555555544444333 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0051
        Cnd1  28 krLkDedpyVRktaaivvakL...ilndmvkekgflselaklleDenprVvanalaalteisek...senaiynl 96 
                 ++  D++  +R+ a++v+  +   ++ d     +f++ + + ++D++++V+  ++  l  ++e    ++++++  
  EPX71347.1 130 QAAMDPNDSIREMAIYVLYSIaetVDLDSKLLLDFVHLFSRTITDSSRTVRVTSVQGLGAVAEVlesDDKKLLHA 204
                 445566666666666666666555445555555566666666666666666666554443333332244444444 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.0049
        Cnd1  25 pLrkrLkDedpyVRktaaivvakL...ilndmvkekg.flselaklleDenprVvanalaalteisek.senaiynllpdiiskl 104
                  + ++L D d+ VR+ a+++++++   i +++ k    fl  + +l++ +  +V ++a +++  ++e  + ++i   lp ++ +l
  EPX71347.1 387 LIVNGLCDVDMNVRQAALLALSQIaveIPMEVSKHHAqFLPLVFELMSTQGVKVGKSACNCIDALLEGlDRSEISGYLPMLMERL 471
                 567889999************9998888888777777677777777788888888888777777777666666666666666655 PP

  == domain 4  score: 6.2 bits;  conditional E-value: 0.0063
        Cnd1  38 RktaaivvakL...ilndmvkekg.flselaklleDenprVvanalaalteiseksenaiynllpdiiskls 105
                 R  a+ ++ ++   i+  +      ++  + ++leD++ +V++na +++  + + s++++ +   +i++kl+
  EPX71347.1 870 RAMAVACIGEVaggIESAITPFTAdVFTLFMTALEDPEGEVRSNAAYSMGLLCQFSTENLSSEYLNILQKLQ 941
                 666666666666655555544433477888889999999999999999998888886666666666666665 PP

>> Adaptin_N  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   1.4   0.00035      0.52      90     409 ..     134     415 ..     109     522 .. 0.39
   2 ?    0.3   0.0      0.13     2e+02      94     139 ..     657     705 ..     652     714 .. 0.85
   3 !    9.8   0.0   0.00017      0.25      39     226 ..     850    1055 ..     837    1067 .] 0.70

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00035
                 SSSHHHHHHHHHHHCCC-.....-CCCHHHHHHHHHHHHT-SSHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHCTT-SSHHHHHHHHHHHHHHHCCC CS
   Adaptin_N  90 dpnqlirglALrvLssir.....vpelaedlapaikkllkdrspyvrkkAalailklykkdpdllrkqlveeikellsdkdpgvvlaAvalleeikknd 183
                 dpn+ ir +A+ vL si      ++                                                                          
  EPX71347.1 134 DPNDSIREMAIYVLYSIAetvdlDS-------------------------------------------------------------------------- 158
                 3444444444444444433333333.......................................................................... PP

                 CCCCHHHHHHHCCHHHHHHCS-HHHHHHHHHHHCC---SSHHHH.......HHHHHHHCGGCG.......CSSCHHHHHHHHHCCHCCCCST..HHHCC CS
   Adaptin_N 184 rlllkllpklvrrLcnllteldpwlqvkiiklltrlarqepeersk.....kellesllnllq.......ssnnaVlletvnlivelapkne..livla 268
                     kll ++v+ +++ +t+++    v+ ++ l ++a++ +++++k     +++l+s l  lq         ++  ++ + n++  ++ +    ++ ++
  EPX71347.1 159 ----KLLLDFVHLFSRTITDSSRTVRVTSVQGLGAVAEVLESDDKKllhayRDTLPSMLMVLQdvvqvgdEDACKTVFDVFNTFLIVSGAIIskALGNI 253
                 ....44444444444444444444444444444444444444444444444444444444444444444433333333333333311111111122222 PP

                 HHCHHHHHHSS..CCTCHHHHHCHHHHHHHHX...XTTTT.TTTCCCCSXX...........TTSXHHHHHHHHHHHCCCXXTTTHHH.HHHHHHHHTT CS
   Adaptin_N 269 vnaLvrllssk..denlryvaLrtllkivkke...pkavq.hldlkifllk...........tdddvsirlkaldlllklvdesNvke.ivkeLkkyvk 349
                 ++  +   +s+  d  +r +aL  + +    +    +a++  + l++ l++            d +   +l+a+dll++ ++ + v   +++ ++++  
  EPX71347.1 254 IELIIGISTSNqiDDEIRCMALSFIISCIRFKsrkLQALKlGKSLILSLMQvateettedadEDCPARLALRAIDLLSTHLSPTQVFYpMMEAIMTFS- 351
                 22222222211111112222222222222211111111111111111111100000000000123333344444444444443333322444444443. PP

                 SSXXHHHHHHHHHHHHHHHHHS....CCHHHHHHHHHHHHHTTXXHHHHHHHHHHHHHHHHHST CS
   Adaptin_N 350 evadedfksklvkaIgrlaekf....atdaewvldvllellslsgesvkdeivevirdliqkvp 409
                 +++++  +++++ +Ig   e +    a++  ++ + +++ l++ +  v+++++ ++ ++ ++ p
  EPX71347.1 352 QSPEPGHRKAALLSIGVAVEGSsesvASSLPNIFPLIVNGLCDVDMNVRQAALLALSQIAVEIP 415
                 3333333333333333332222211122222222222222222333333333333333333222 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.13
                 HHHHHHHHHHCCC--CCCHHHHHHHHHHHHT-SSH...HHHHHHHHHHH CS
   Adaptin_N  94 lirglALrvLssirvpelaedlapaikkllkdrsp...yvrkkAalail 139
                  i + AL  +++   +  ae+l+p+++kl+++++     vrk++++++ 
  EPX71347.1 657 EIAADALGEICTYVGAPFAEYLEPTVEKLVSSTTHfyeGVRKSSLTSLW 705
                 567788888888889999*************999986679999998876 PP

  == domain 3  score: 9.8 bits;  conditional E-value: 0.00017
                  --GHHHHHHHCCCCSS-CHHHHHHHHHHHHHCTTSCCHHCC.....CCHHHHHHCCSSSHHHHHHH...HHHHCCC--CCCHHHHHHHHHHHHT-SS CS
   Adaptin_N   39 dvsflffevvklvaskdfelKrlvYlylellaeesedlalL.....vtnslqkDlkdpnqlirglA...LrvLssirvpelaedlapaikkllkdrs 127 
                  +++  f+++vk  +s++ +++ +    + ++a   e  a+      v   ++ +l+dp+  +r++A   +  L+++++++l+   ++ ++kl    +
  EPX71347.1  850 SFQVFFPHIVKYYSSNNGTERAMAVACIGEVAGGIES-AITpftadVFTLFMTALEDPEGEVRSNAaysMGLLCQFSTENLSSEYLNILQKLQPFFT 945 
                  5667788888888888888888888888888777777.33335666778888888888888888883334456666688888887777777777444 PP

                  H....HHHHHHHHHHHHCCCCCHHCCCCC.HHHHHHHCT.T-SSHHHHHHHHHHHHHH.HCCCCCCC....HHHHHHHCCHHHHHHCS-HHHHHHHH CS
   Adaptin_N  128 p....yvrkkAalailklykkdpdllrkq.lveeikell.sdkdpgvvlaAvalleei.kkndrlll....kllpklvrrLcnllteldpwlqvkii 213 
                           +A+ +i +l+  d+++++ + +++ + ++l   +d++  +    ++ ++ ++++ +ll    +l+p +++ L+   ++l++ l + +i
  EPX71347.1  946 QeifrTALDNAIGCISRLILHDQNAIPLDqVLPILLSKLpLKEDYLENAPLYYMILHLyRQKNPILLqhlgDLIPVFASVLTGPAEQLNDELRTQLI 1042
                  4233344456788888888888888888888888888885455555555555666666655555555688888888888888888999999999999 PP

                  HHHCC---SSHHH CS
   Adaptin_N  214 klltrlarqepee 226 
                  +ll++ a++++ +
  EPX71347.1 1043 NLLKEIAPEYQTL 1055
                  9999999987765 PP

>> CLASP_N  CLASP N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.18   2.6e+02     135     215 ..     128     202 ..     121     213 .. 0.78
   2 !    5.5   0.0    0.0074        11      48     126 ..     378     456 ..     362     469 .. 0.76
   3 ?    0.8   0.0      0.21   3.1e+02      71     104 ..     572     605 ..     506     614 .. 0.72
   4 ?    2.8   0.0     0.051        76      73     147 ..     832     911 ..     826     940 .. 0.56
   5 ?   -3.7   0.0       4.9   7.3e+03      64      87 ..    1032    1055 ..    1023    1062 .. 0.72

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.18
     CLASP_N 135 lsvalqdKnvqpReysaiwLkilltrfeshkskleasllldliekslkkgleDanptVRetaRstfweffkvwPsrAksll 215
                 l +a+ d n ++Re+++  L  + +        l+ +lll  ++ ++ + ++D++ tVR t+ + +  +++v  s  k+ll
  EPX71347.1 128 LVQAAMDPNDSIREMAIYVLYSIAETVD-----LDSKLLL-DFVHLFSRTITDSSRTVRVTSVQGLGAVAEVLESDDKKLL 202
                 6678888899999999999999998888.....8888877.678899999********98876666666666666666665 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.0074
     CLASP_N  48 leclkqlleailkalssLrttlsstgchllkelaiqlkeqldpmveillptLlkllgdtKkiisqnanqalaallsnas 126
                  ++l ++  +i++ l ++   + +++++ l+++a +   ++ +   ++lp+ ++l++ +   + ++a ++++all+ + 
  EPX71347.1 378 ASSLPNIFPLIVNGLCDVDMNVRQAALLALSQIAVEIPMEVSKHHAQFLPLVFELMSTQGVKVGKSACNCIDALLEGLD 456
                 5555555566666666666667778888888999999999999999999999999999999999999999999988776 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.21
     CLASP_N  71 stgchllkelaiqlkeqldpmveillptLlkllg 104
                   +  +   la++ ke+++p++ +++p L+k l 
  EPX71347.1 572 ECSFCFYAVLARVYKEEFAPFLPHIVPALFKSLD 605
                 4456788889*******************99875 PP

  == domain 4  score: 2.8 bits;  conditional E-value: 0.051
     CLASP_N  73 gchllkelaiqlkeqldpmveillptLlkllgdtKkiisqnanqalaallsnas.....fsprilqvlsvalqdKnvqpR 147
                 +c ++  l+  l e++ ++ + ++p+++k  +++    ++ a +++  +   ++     f+ +++++ ++al+d   + R
  EPX71347.1 832 ACDVVIALSMALAESFVESFQVFFPHIVKYYSSNNGTERAMAVACIGEVAGGIEsaitpFTADVFTLFMTALEDPEGEVR 911
                 56666666666666666666667777777666666666666666665554332111112444444444444444444444 PP

  == domain 5  score: -3.7 bits;  conditional E-value: 4.9
     CLASP_N   64 sLrttlsstgchllkelaiqlkeq 87  
                  +L   l ++++ llke+a + ++ 
  EPX71347.1 1032 QLNDELRTQLINLLKEIAPEYQTL 1055
                  556667788888888888777665 PP

>> RTP1_C1  Required for nuclear transport of RNA pol II C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.2     0.014        21       8      83 ..     132     205 ..     128     225 .. 0.83
   2 !    8.2   0.0    0.0018       2.7       4      78 ..     347     421 ..     344     451 .. 0.88
   3 ?   -0.5   0.0       0.9   1.3e+03      40      73 ..     894     927 ..     855     956 .. 0.69
   4 ?   -0.1   0.0       0.7   1.1e+03      20      55 ..     957     990 ..     896     991 .. 0.48

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.014
     RTP1_C1   8 lqdpllpvrahglvlLrkliekkskeavldiekilkllleaLkdedsYvYLnaikgLvaLadvfpeevlklLleey 83 
                   dp   +r  +++ L +++e+ +  + + +   ++l+ ++++d+   v + +++gL a+a+v +++  k+Ll++y
  EPX71347.1 132 AMDPNDSIREMAIYVLYSIAETVD-LDSKLLLDFVHLFSRTITDSSRTVRVTSVQGLGAVAEVLESDD-KKLLHAY 205
                 56888899999********99999.6777777889***************************987654.5666666 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.0018
     RTP1_C1   4 alkdlqdpllpvrahglvlLrkliekkskeavldiekilkllleaLkdedsYvYLnaikgLvaLadvfpeevlkl 78 
                 +++  q+p++  r  +l+++   +e +s++ ++++++i+ l+++ L d d  v  +a  +L+++a  +p ev k+
  EPX71347.1 347 IMTFSQSPEPGHRKAALLSIGVAVEGSSESVASSLPNIFPLIVNGLCDVDMNVRQAALLALSQIAVEIPMEVSKH 421
                 5666799**********************************************************9999999875 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.9
     RTP1_C1  40 kilkllleaLkdedsYvYLnaikgLvaLadvfpe 73 
                  +++l+++aL+d++  v  na   +  L+++ +e
  EPX71347.1 894 DVFTLFMTALEDPEGEVRSNAAYSMGLLCQFSTE 927
                 5666666666666665555555555555555444 PP

  == domain 4  score: -0.1 bits;  conditional E-value: 0.7
     RTP1_C1  20 lvlLrkliekkskeavldiekilkllleaLkdedsY 55 
                 +  +++li + +  +++ ++++l +ll+ L  +++Y
  EPX71347.1 957 IGCISRLILHDQ--NAIPLDQVLPILLSKLPLKEDY 990
                 223333444333..6666677777777776666666 PP

>> Ipi1_N  Rix1 complex component involved in 60S ribosome maturation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0       1.7   2.6e+03      25      69 ..     139     175 ..     135     219 .. 0.59
   2 ?    9.1   0.0    0.0013       1.9       3      64 ..     377     437 ..     375     452 .. 0.88
   3 ?   -0.9   0.0       1.7   2.5e+03      14      33 ..     685     704 ..     674     711 .. 0.83
   4 ?   -1.2   0.0       2.1   3.2e+03      25      65 ..     757     799 ..     754     824 .. 0.78
   5 ?   -2.3   0.0       4.7     7e+03      24      56 ..     909     940 ..     888     947 .. 0.79

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 1.7
      Ipi1_N  25 IredslkfLdllLevapeelvssawvktLnnflallgwskekssk 69 
                 Ire ++ +L  + e +  +       k+L  f+ l++++   +++
  EPX71347.1 139 IREMAIYVLYSIAETVDLD------SKLLLDFVHLFSRTI--TDS 175
                 5555555555555555555......677777777777732..111 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0013
      Ipi1_N   3 laphaeslllyirsAmTHispdIredslkfLdllLevapeelvssawvktLnnflallgwsk 64 
                 +a   ++++  i  ++  +++++r+ +l  L+ +   +p e vs+++++ L  +++l++ + 
  EPX71347.1 377 VASSLPNIFPLIVNGLCDVDMNVRQAALLALSQIAVEIPME-VSKHHAQFLPLVFELMSTQG 437
                 66778999999************************9*****.*****************964 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 1.7
      Ipi1_N  14 irsAmTHispdIredslkfL 33 
                 + s+ TH  + +r++sl  L
  EPX71347.1 685 LVSSTTHFYEGVRKSSLTSL 704
                 67899***********9766 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 2.1
      Ipi1_N  25 IredslkfLdllLevapeelvssawvktLnnflallgwsk..e 65 
                 + +d l+ L   ++ ++  ++ + + k+ + ++++l +++  +
  EPX71347.1 757 VATDILRNLAEAIKTCGPVVLGDDYSKICEIVMEVLQKQHivQ 799
                 556667777888899999988888************9987542 PP

  == domain 5  score: -2.3 bits;  conditional E-value: 4.7
      Ipi1_N  24 dIredslkfLdllLevapeelvssawvktLnnf 56 
                 ++r+ +   + ll ++++e+ +ss+++++L+++
  EPX71347.1 909 EVRSNAAYSMGLLCQFSTEN-LSSEYLNILQKL 940
                 78999999999999999999.777788888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1067 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       712  (0.0397122); expected 358.6 (0.02)
Passed bias filter:                      626  (0.0349155); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.93u 0.32s 00:00:01.25 Elapsed: 00:00:00.51
# Mc/sec: 6325.52
//
Query:       EPX71348.1  [L=506]
Description: hypothetical protein SOCG_01566 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0017   17.8   0.1      0.026   14.0   0.0    2.6  2  Trs65     TRAPP trafficking subunit Trs65


Domain annotation for each model (and alignments):
>> Trs65  TRAPP trafficking subunit Trs65
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       0.1   1.8e+03       7      54 ..     253     300 ..     247     309 .. 0.74
   2 !   14.0   0.0   1.4e-06     0.026     143     305 ..     342     491 ..     315     504 .. 0.70

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.1
       Trs65   7 evvlekidlslkggtvedlnqkdglslPlscvahDhltllYkLapeel 54 
                 +++l++++ + ++ + + l  k++  +  ++  +D ++++Y+L+ +++
  EPX71348.1 253 SFILKDFTSKSSSSSLSLLGPKCNDGINATLTGSDLFSVVYQLKLQPS 300
                 6777777777777777777777777777888999999****9996544 PP

  == domain 2  score: 14.0 bits;  conditional E-value: 1.4e-06
       Trs65 143 srpdalpsleasasrtretsspdlgitltfsgpskkvkvGeefswkvfvvNrsskerkLaLivipkrrrnevrvsrpssssassknkkdeevadavlde 241
                   ++ +++l++s s t++ ++ +  + ++ + ps  vk G +f +++   N s+ +++L++  ip    ++v  ++   +++      d e+     d 
  EPX71348.1 342 HMHKHTKQLSSSES-TTSLTPLLKVLEMSATVPS-YVKSGTTFPVSINLYNPSDVPLELVVQ-IPLYT-YDVFFTNDNNEAN------DGEKH----DG 426
                 33333333333333.335556666789*******.*********************999887.77777.5544322222222......22233....33 PP

       Trs65 242 nvvhamqkss.kvdsaevvcLsnDiRvGpLapgacyevelrflalreGvlsleavrvvDlgsqeh 305
                    + ++k + +++  +++  ++ ++ G ++p+     +l+fla r G + l  + v D++ q h
  EPX71348.1 427 LSSFPSNKPYyVTKLPGIIASTTIFHTGIISPKCEKDFDLQFLAYRPGSYDLSYITVKDVHRQSH 491
                 3334444444155667999999999********************************99998877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (506 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       575  (0.0320709); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 3629.14
//
Query:       EPX71349.1  [L=281]
Description: hypothetical protein SOCG_01567 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-10   40.6   2.3    2.9e-10   40.0   2.3    1.4  1  DUF4504   Domain of unknown function (DUF4504)


Domain annotation for each model (and alignments):
>> DUF4504  Domain of unknown function (DUF4504)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.0   2.3   1.6e-14   2.9e-10     149     242 ..     140     236 ..      72     256 .. 0.79

  Alignments for each domain:
  == domain 1  score: 40.0 bits;  conditional E-value: 1.6e-14
     DUF4504 149 idlsselessevnlp...tlnGiLLgYPvvYlFdkeqise.nnLslkpLrvfrilvsrnqeskkkseeLlsFsvPeelsseikssleqWakalqarfk 242
                   ++s ++s+   ++    l G LL+Y ++Y F ++  s+ n Ls++pL+++r +++ ++++  +   +l+Fs P + ++++    eq + + q+r +
  EPX71349.1 140 RFSYSAMQSEVEEVCsitALTGCLLNYGATYHFCSSDDSQnNGLSKEPLNIYRLTAVISKSNF-HFSPVLQFSCPVKFQQQVAIIVEQFRFNYQKRWE 236
                 44567788887889988789*************9877666488**************887776.669***************9999999998888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (281 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       487  (0.0271627); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2046.26
//
Query:       EPX71350.1  [L=522]
Description: AGC/RSK protein kinase Ppk22 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.4e-70  236.4   0.0    4.7e-70  236.0   0.0    1.2  1  Pkinase      Protein kinase domain
    3.8e-31  108.3   0.1    9.7e-24   84.0   0.0    2.2  2  Pkinase_Tyr  Protein tyrosine kinase
    2.4e-06   27.1   1.1     0.0021   17.4   0.0    3.1  2  Kinase-like  Kinase-like
  ------ inclusion threshold ------
      0.025   13.9   0.0      0.042   13.2   0.0    1.2  1  Kdo          Lipopolysaccharide kinase (Kdo/WaaP) family
      0.057   13.3   0.0        5.8    6.8   0.0    2.2  2  APH          Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  236.0   0.0   1.3e-73   4.7e-70       1     264 []     148     438 ..     148     438 .. 0.95

  Alignments for each domain:
  == domain 1  score: 236.0 bits;  conditional E-value: 1.3e-73
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHH..HHSS-- CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladlle..rkgsls 96 
                 +ek++ lG+G++GkVy +++k++++ +A+K+++k ++ k+++ ++vl+E +il k++hp+iv+ly++f+++d+lyl++ey+ gge++++l+     +l+
  EPX71350.1 148 FEKIRLLGQGDVGKVYLVKQKSNNRLFAMKILSKAEMIKRRKvQRVLAEQEILTKSNHPFIVTLYHAFQSTDHLYLCMEYCAGGEFFRALHslPGHVLP 246
                 68899********************************999999************************************************988889** PP

                 HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS............................BCTTTSCGGGS-HH CS
     Pkinase  97 eeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk............................ltsfvgtseYlAPE 167
                 e+ a ++a+++  +leylH +g+i+rDlKpeNiL++++g+++++DF+l+k ++++ +                            ++sfvgt+eY+ PE
  EPX71350.1 247 EKSACFYAAEVTLALEYLHLMGFIYRDLKPENILLHQSGHIMLSDFDLSKPINTEAHprvrvtkhstfsqdkpaldtnsyfsvyrTNSFVGTEEYIVPE 345
                 ******************************************************9999***************************************** PP

                 HHTTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTT....HHHHHTSG CS
     Pkinase 168 vlkeneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRlt....aeellqhp 262
                 ++++ +++ +vD+W+lG+ lye+l+g++pf+g++++ +++++l       +    +  ++  a ++s+++k+l+++ll kd++kR++    a+++++hp
  EPX71350.1 346 MIRSCGHTVAVDWWTLGIFLYEILYGTTPFKGKNRHATFSNILYA-----D---VNFPEYSSAPNVSSTCKNLIRRLLIKDETKRFGsvagASDIKEHP 436
                 *******************************99998877777777.....2...233467778889********************99999******** PP

                 GG CS
     Pkinase 263 yl 264
                 ++
  EPX71350.1 437 FF 438
                 98 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.0   0.0   2.7e-27   9.7e-24       3     158 ..     150     303 ..     148     315 .. 0.89
   2 !   22.1   0.0   2.2e-08   7.8e-05     169     227 ..     339     397 ..     320     424 .. 0.72

  Alignments for each domain:
  == domain 1  score: 84.0 bits;  conditional E-value: 2.7e-27
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEEST..TSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlke..eateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkeke 98 
                    + lG+G  GkV+  + k    +++   a+K+l++    ++++ +++l e +i++k +hp iv l+ +  ++++l++ +ey++gG++   L++   +
   EPX71350.1 150 KIRLLGQGDVGKVYLVKQK----SNNRLFAMKILSKaeMIKRRKVQRVLAEQEILTKSNHPFIVTLYHAFQSTDHLYLCMEYCAGGEFFRALHSLPGH 243
                  5688**********99988....788889999995511445666899************************************************999 PP

                  TSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSE CS
  Pkinase_Tyr  99 kltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekdde 158
                   l  k+ + +a++v  ++eyL+ + ++ rdl   N+Ll+++ ++ +sDf L++ i+++ +
   EPX71350.1 244 VLPEKSACFYAAEVTLALEYLHLMGFIYRDLKPENILLHQSGHIMLSDFDLSKPINTEAH 303
                  9999*************************************************9965544 PP

  == domain 2  score: 22.1 bits;  conditional E-value: 2.2e-08
                  GGGS-HHHHHHSEEEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHH.HTTEES-BB CS
  Pkinase_Tyr 169 vkWmapEslkekkftsksDvWsfGvllwEiftlgespypglkneevlekl.kegkrlekp 227
                   +++ pE+++++  t++ D W  G++l+Ei+  g +p++g + + +++++  ++ + ++ 
   EPX71350.1 339 EEYIVPEMIRSCGHTVAVDWWTLGIFLYEILY-GTTPFKGKNRHATFSNIlYADVNFPEY 397
                  57999**************************9.*******96665554443665554443 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.4   0.2    0.0056        20       6      58 ..     140     192 ..     136     206 .. 0.79
   2 !   17.4   0.0   5.9e-07    0.0021     158     288 .]     262     422 ..     245     422 .. 0.80

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.0056
  Kinase-like   6 elgerertlvrgellkkgdrsvvfevkdqetgeplavkvfllpseaskkdler 58 
                  + +  ++ + +  ll++gd ++v++vk +  +  +a+k+ +  +   +++++r
   EPX71350.1 140 KVEVAPQSFEKIRLLGQGDVGKVYLVKQKSNNRLFAMKILSKAEMIKRRKVQR 192
                  556678889999******************99999999988777666666655 PP

  == domain 2  score: 17.4 bits;  conditional E-value: 5.9e-07
  Kinase-like 158 anLqakglvhgkftvdnllldekgglmlggft...aLvr.agtkvvlseve...............kgfaPpEllgsrgg..ytrknktkmthkldaW 234
                   +L+  g +  +++++n+ll++ g +ml +f+   ++ + a  +v++ +                   +    ++g       ++ +    t ++d W
   EPX71350.1 262 EYLHLMGFIYRDLKPENILLHQSGHIMLSDFDlskPINTeAHPRVRVTKHStfsqdkpaldtnsyfSVYRTNSFVGTEEYivPEMIRSCGHTVAVDWW 359
                  68999*************************9622233321333444433336678888999988887778888888866555578899999******* PP

  Kinase-like 235 qlGlviyriwclklPltlateeakeew.........kfklckkipekvkaLlkkfLqlsqedR 288
                  +lG+  y i   + P+  +   a  +          +++   +++   k L++++L  ++ +R
   EPX71350.1 360 TLGIFLYEILYGTTPFKGKNRHATFSNilyadvnfpEYSSAPNVSSTCKNLIRRLLIKDETKR 422
                  ****************99998887766788999999999999*************99888877 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.2e-05     0.042     126     174 ..     256     300 ..     242     311 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.2e-05
         Kdo 126 avgrliaklhragvnHadlyaknillqqeeeeeaeiwliDldkarlrlr 174
                 +v  + + lh +g   +dl + nill+q +    +i+l D+d +++  +
  EPX71350.1 256 EVTLALEYLHLMGFIYRDLKPENILLHQSG----HIMLSDFDLSKPINT 300
                 67778899**********************....********9988765 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0    0.0085        30       2      84 ..     151     247 ..     150     261 .. 0.70
   2 ?    6.8   0.0    0.0016       5.8     166     197 ..     267     296 ..     254     300 .. 0.78

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.0085
                 EEEE--.SSCEEEEEEETT..--EEEEEE-TT..S-HHHHHHHHHHHHHHHHTT-B--B-CTTB.S-EEETTE.........EEEEEE----EE-SS CS
         APH   2 vrelsggasnrtylvttpa..gryvlrrnppa..raaeeirrevallrlLakagvpvPevlagd.tddeeigl.........lfalieyvpgrsllr 84 
                 +r l+ g   ++ylv+ ++  + +++++ ++a     ++++r +a+   L k++ p  + l+   ++ ++++l          f+++ ++pg++l +
  EPX71350.1 151 IRLLGQGDVGKVYLVKQKSnnRLFAMKILSKAemIKRRKVQRVLAEQEILTKSNHPFIVTLYHAfQSTDHLYLcmeycaggeFFRALHSLPGHVLPE 247
                 6777888888899999999744666777666666555555555555566666655544454434388888888899999999999999999998876 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0016
                 EEEE-SS-SGGGEEEC..TTEEEEE---TT-E CS
         APH 166 tvllHgDlhpgNllvdpddgrvtGviDfedag 197
                 ++++ +Dl+p N+l+++  g++  + Df++++
  EPX71350.1 267 MGFIYRDLKPENILLHQS-GHI-MLSDFDLSK 296
                 5799************44.555.366888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (522 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       627  (0.0349713); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.60u 0.26s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 3725.34
//
Query:       EPX71351.1  [L=55]
Description: hypothetical protein SOCG_01569 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       272  (0.015171); expected 358.6 (0.02)
Passed bias filter:                      204  (0.0113782); expected 358.6 (0.02)
Passed Vit filter:                         6  (0.000334653); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.24s 00:00:00.58 Elapsed: 00:00:00.39
# Mc/sec: 421.98
//
Query:       EPX71352.1  [L=240]
Description: U2 snRNP-associated protein Lea1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.4e-53  178.6   0.5      1e-52  178.1   0.5    1.2  1  LRR_9     Leucine-rich repeat
    6.2e-09   36.0   8.1    2.2e-07   31.1   1.8    3.3  4  LRR_4     Leucine Rich repeats (2 copies)
    1.3e-06   28.0   0.7    3.7e-06   26.6   0.7    1.8  1  LRR_8     Leucine rich repeat
  ------ inclusion threshold ------
       0.11   12.1   0.7       0.22   11.2   0.7    1.4  1  BRD4_CDT  C-terminal domain of bromodomain protein 4
       0.11   11.1   0.0       0.11   11.0   0.0    1.1  1  ILVD_EDD  Dehydratase family


Domain annotation for each model (and alignments):
>> LRR_9  Leucine-rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.1   0.5   2.9e-56     1e-52       3     164 ..       2     163 ..       1     174 [. 0.97

  Alignments for each domain:
  == domain 1  score: 178.1 bits;  conditional E-value: 2.9e-56
       LRR_9   3 kltaelikqsaqyinairereldlrgykipvienlGatldqfdtidlsdndirkldgfPllkrlktlllnnnrivriaegleevlPnleelvltnnelq 101
                 +l+ae+++q  ++in+++e eldlr   ip+ienlG   d  d+id++dndir l +fP ++rl+tll   nri  i ++l++vlPnl+ l lt+n++q
  EPX71352.1   2 RLNAEFLTQVPSFINPLKESELDLRYVNIPLIENLGILRDTNDSIDFTDNDIRYLGNFPRMRRLQTLLCGRNRISTIDPELGKVLPNLKILSLTQNHIQ 100
                 89************************************************************************************************* PP

       LRR_9 102 eladldPlaslkklellsllknpvtnkkeyrlyviyklkqlrlldfrkvklkereeaeklfks 164
                 +ladldPl + ++l+ l+ l+n+v++++ yrly+++++++l++ldf++v+++er  a+++f +
  EPX71352.1 101 QLADLDPLSTCPRLTHLTCLDNAVSQNQYYRLYLVWRIPSLHILDFERVRENERRRAQEIFGT 163
                 ************************************************************965 PP

>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1       1.8   6.6e+03      28      30 ..      23      25 ..       8      40 .. 0.57
   2 !   31.1   1.8     6e-11   2.2e-07       2      43 ..      64     106 ..      63     110 .. 0.82
   3 !   11.7   0.1   7.9e-05      0.28      12      33 ..     101     122 ..      98     133 .. 0.86
   4 ?    4.9   0.1     0.011        39       1      30 [.     112     146 ..     112     150 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 1.8
                EE- CS
       LRR_4 28 LdL 30
                LdL
  EPX71352.1 23 LDL 25
                343 PP

  == domain 2  score: 31.1 bits;  conditional E-value: 6e-11
                 S--EEE--SS---E-S-.HHH.-TT--EEE-.-S-----GGGGX CS
       LRR_4   2 nLevLdLsnNqltdipl.lek.lpnLkeLdLsgNnlitdldeLk 43 
                 +L++L ++ N++++i++ l+k lpnLk L+L++N  i++l +L 
  EPX71352.1  64 RLQTLLCGRNRISTIDPeLGKvLPNLKILSLTQN-HIQQLADLD 106
                 7*****************9999*********777.555554443 PP

  == domain 3  score: 11.7 bits;  conditional E-value: 7.9e-05
                 ---E-S-HHH-TT--EEE-.-S CS
       LRR_4  12 qltdiplleklpnLkeLdLsgN 33 
                 ql d+++l+ +p L++L++ +N
  EPX71352.1 101 QLADLDPLSTCPRLTHLTCLDN 122
                 699***************9888 PP

  == domain 4  score: 4.9 bits;  conditional E-value: 0.011
                 SS--EEE--SS---E-S-..HH...H-TT--EEE- CS
       LRR_4   1 pnLevLdLsnNqltdipl..le...klpnLkeLdL 30 
                 p+L++L + +N ++  +   l+    +p+L+ Ld 
  EPX71352.1 112 PRLTHLTCLDNAVSQNQYyrLYlvwRIPSLHILDF 146
                 78999999999999988866335678999999985 PP

>> LRR_8  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.7     1e-09   3.7e-06       1      54 [.      63     117 ..      63     122 .. 0.85

  Alignments for each domain:
  == domain 1  score: 26.6 bits;  conditional E-value: 1e-09
                 TT-SEEE-TTS--SEE-TTSSTT-TT--EEE--SS---GG.GGGGGTT--S-.EE CS
       LRR_8   1 pnLtsLdLsnNrltslddeaFkglsnLkvLdLsnNllttl.spgafsgLpsLrsL 54 
                 ++L++L   +Nr++ +d+e  k l+nLk+L+L++N ++ l + + +s +p+L++L
  EPX71352.1  63 RRLQTLLCGRNRISTIDPELGKVLPNLKILSLTQNHIQQLaDLDPLSTCPRLTHL 117
                 6899**********************************96145566666666666 PP

>> BRD4_CDT  C-terminal domain of bromodomain protein 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.7   6.1e-05      0.22      10      28 ..     147     165 ..     145     165 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 6.1e-05
    BRD4_CDT  10 aRkrEqeRRrreamagtID 28 
                 +R rE eRRr +++ gtID
  EPX71352.1 147 ERVRENERRRAQEIFGTID 165
                 799***************9 PP

>> ILVD_EDD  Dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   3.2e-05      0.11     317     397 ..     149     234 ..      89     240 .] 0.81

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 3.2e-05
    ILVD_EDD 317 lee.aevkeqdvirplekplskegglavLkGnLapeGavvKtsaveeellkfegpArvfdseeeaveailk....gkikagdvvvi 397
                 ++e ++ ++q++  ++++p++ ++++  +k  +++ G  v+ s ++++ ++ +g A   +++e++ eai++     +i++ +v+ +
  EPX71352.1 149 VREnERRRAQEIFGTIDRPTEIAASIMGVKSRVFDLGTLVQSSNTDTNATVSTGYALTPEEKEQIKEAIKNassiAEINRLEVMLL 234
                 322256699************************************************************88644445665556665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       647  (0.0360868); expected 358.6 (0.02)
Passed bias filter:                      570  (0.0317921); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1726.78
//
Query:       EPX71353.1  [L=97]
Description: elongin C [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-10   40.5   0.0    3.4e-10   39.9   0.0    1.3  1  Skp1_POZ  Skp1 family, tetramerisation domain


Domain annotation for each model (and alignments):
>> Skp1_POZ  Skp1 family, tetramerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.9   0.0   1.9e-14   3.4e-10       2      61 ..       5      66 ..       4      68 .. 0.94

  Alignments for each domain:
  == domain 1  score: 39.9 bits;  conditional E-value: 1.9e-14
                EEEEEETTSCEEEEEHHHHTTSHHHHHHH.HCTCCCGT.TCEEETTS-HHHHHHHHHHHHHC CS
    Skp1_POZ  2 sivLqSsDgesfeveeavakkSktikhmi.edlgdddk.priplpnvtskiLekvieYckhh 61
                 ++L+SsDg +f   +++a++S tik+++ e+++++ + ++   p + +  Lekv eY++++
  EPX71353.1  5 YVKLISSDGFEFVLRKDIACISGTIKAILnEGVFAEAQnNECTFPDIRGSLLEKVCEYLHYN 66
                59***************************778999999999******************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       419  (0.02337); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 707.22
//
Query:       EPX71354.1  [L=441]
Description: hypothetical protein SOCG_01572 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.4e-74  247.8   0.8    9.8e-74  247.2   0.8    1.3  1  UPF0300   Uncharacterised protein family (UPF0300)


Domain annotation for each model (and alignments):
>> UPF0300  Uncharacterised protein family (UPF0300)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  247.2   0.8   5.5e-78   9.8e-74       2     210 ..     189     395 ..     188     397 .. 0.99

  Alignments for each domain:
  == domain 1  score: 247.2 bits;  conditional E-value: 5.5e-78
     UPF0300   2 lkkfeelfkelseflekgniplsvLihhvmLYdyYpeelkdalWkAvevyvseqvssgkytklhvkaaqkklgdiRlyLvkpediyvvknssdWiaisn 100
                 +k+f+e+f+++++fl+ +n+plsvL+hhvmLYd+Y+++lkda+W ++++y++++  s++yt+lhv+aa++kl+++R+++v+pe++++v+n+ dW+++sn
  EPX71354.1 189 EKNFPEAFEQFINFLNGPNVPLSVLLHHVMLYDLYSPRLKDAIWDTIKNYIQKMKGSYGYTDLHVEAARYKLTHPRFIMVHPEELFSVYNNPDWVCVSN 287
                 689************************************************************************************************ PP

     UPF0300 101 knFqcyiqleekleekklksekskieelasvaeseeelgWLllllsigsnasafPihaYlnakkkllesklpesllllrkeDellfqdkeeieeleell 199
                 ++F+c+i+++  ++++ ++s++++i+e+as+++++ e++WL+l l+++++ s+fPihaYln+k+kl+++++p+sll+++keDe++++++ e e++++++
  EPX71354.1 288 EHFHCNIHIQPIVSNA-IRSRDDRIREVASKCQTPVEYAWLALGLALRKKVSIFPIHAYLNCKSKLYDETIPPSLLYYSKEDENINTSNIE-EIINYMY 384
                 ************9999.9*************************************************************************.9****** PP

     UPF0300 200 kelledlakce 210
                 + +++++a c 
  EPX71354.1 385 EIFNAEAALCG 395
                 **********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (441 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       609  (0.0339673); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.29s 00:00:00.79 Elapsed: 00:00:00.45
# Mc/sec: 2936.31
//
Query:       EPX71355.1  [L=737]
Description: carbohydrate kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   3.9e-125  417.0   0.0   5.1e-125  416.6   0.0    1.2  1  Indigoidine_A  Indigoidine synthase A like protein
    3.2e-24   85.8   0.0    8.6e-13   48.2   0.0    2.6  2  PfkB           pfkB family carbohydrate kinase
  ------ inclusion threshold ------
      0.059   12.7   0.0        1.7    8.0   0.0    2.4  2  Phos_pyr_kin   Phosphomethylpyrimidine kinase


Domain annotation for each model (and alignments):
>> Indigoidine_A  Indigoidine synthase A like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  416.6   0.0  8.6e-129  5.1e-125       1     289 [.      43     333 ..      43     335 .. 0.99

  Alignments for each domain:
  == domain 1  score: 416.6 bits;  conditional E-value: 8.6e-129
                    .EEE---TTS-EEEE-SHHHHTSS-HHHHHHHHHHHHHHHHHHT-EEEEEEEETTEEEES--HHHHHHHHHH-....EE-GGGHHHHHHHT--EEE CS
  Indigoidine_A   1 eVkealaegkpvVALEstiithGlpypenlelaleveaivreegavPAtiaildGkikvGlseeelerlakkakkvaKvsrrdlalvlakkldgat 96 
                    eV++al++g p+VALEstiithG+p+pen ++aleve++vr++gavPAtia++dGk+++Gl+e+el+rlak +  ++Kvsrrdl++++++kl+g+t
     EPX71355.1  43 EVSNALKNGLPLVALESTIITHGMPFPENQRMALEVENAVRKSGAVPATIAVIDGKCTIGLEESELQRLAKIGPLARKVSRRDLGYITSQKLNGGT 138
                    89********************************************************************************************** PP

                    -HHHHHHHHHHTT--EEE-S-B--B-TT...SS-B-HHHHHHTTS-EEEEESBB-TTS-HHHHHHHHHHTT--EEEES..-SB--BTTBS--S-B- CS
  Indigoidine_A  97 TvaatmilAalagIkvfatggiGGVhrgaeesmDvSaDLteLartpvavvcaGvksiLdiprtleyLetqgvpvvtyk..tdefpaFytresgvkv 190
                    Tva+tmilA++agI+vfatggiGGVhrgae++mD+SaDL eL+rt+v vvcaGvksiLdi++tle+Letqgvpvvt++  +++fpaF++res++k+
     EPX71355.1 139 TVASTMILAEKAGIDVFATGGIGGVHRGAETTMDISADLIELGRTRVGVVCAGVKSILDIGKTLEFLETQGVPVVTLGpeNSSFPAFFSRESSFKS 234
                    ******************************************************************************8777************** PP

                    -.EE-SHHHHHHHHHHHHHTT--SEEEEE----GGG---HHHHHHHHHT------.....GGGHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHH CS
  Indigoidine_A 191 plrvesaeeaAkllkakeelglksgvlvavPipeeaaldkeeiekaieealeeaeekgikGkevTpfllkrikeltkgksleanialvknnarvaa 286
                    p+ + s+e++A+ll+++ +l+l+ g+lvavP+pee++l+ e++e+ i+ +l+++ee+gi+Gk++Tpfll ++ +ltkgksl++ni+lv nnar aa
     EPX71355.1 235 PMCLGSPEDVAALLHQNIKLNLQCGTLVAVPTPEECSLSYETMESFINLSLKRCEEQGIHGKDITPFLLGQLFHLTKGKSLSTNIDLVLNNARNAA 330
                    ************************************************************************************************ PP

                    HHH CS
  Indigoidine_A 287 kiA 289
                    +i+
     EPX71355.1 331 SIS 333
                    *97 PP

>> PfkB  pfkB family carbohydrate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.2   0.0   1.4e-16   8.6e-13       2     200 ..     379     575 ..     378     593 .. 0.89
   2 !   34.8   0.0   1.8e-12   1.1e-08     203     295 ..     616     726 ..     602     731 .. 0.82

  Alignments for each domain:
  == domain 1  score: 48.2 bits;  conditional E-value: 1.4e-16
                 EEEEEEEEEEEEEEEECSSH.....TTSEEEESEEEEEEESHHHHHHHHHHHTT-EEEEEEEEESSHHHH.HHHHHHHHTTEEETTEEEESSSEEEEEE CS
        PfkB   2 tkvvviGealidliavsekl.....egelvevktveksaGGagaNvAvalarlgadvafigavGdDnfGe.flleelkkegvdtdyvkidedtrtglal 94 
                  kv +iG++ +d +++ +k         +++  ++++ +GG++ N+Ava +  g+ + +i+++G+D  +   + ++l k+ ++ + +k +ed + + ++
  EPX71355.1 379 PKVISIGSVSVDSVLTLDKNahpskLLGTSHPCRTTQAFGGVAHNIAVASSLIGVPTKLISCIGGDSVATtAIQSYLGKSSLQYKLIK-KEDFSSCSYT 476
                 68999*****999999999987775556668889********************************9876268889*******98777.999******* PP

                 EEETTTSEEEEEEEEGGGGGHHHHHHHHHHHHHGCTSEEEEESEECTTSHHHHHHHHHHHHHHTTEEEEEECESSSHHHHHHHHHHH..CTESEEEEEH CS
        PfkB  95 ivvdedgertivfnrgaaadltkeeleededlleeadllyisgllsselpeavleelaeaaknggtfdpnlldplgaqfkeallell..aladllkpne 191
                 +v+d   + +++    +++ ++    +++++ l  +d++ ++g    ++++++++ +a  ++ g+  + ++ +++g++ + ++l++l  + +d+++pn 
  EPX71355.1 477 AVNDH--QGSLLLAGADMSIMERLTYKDVKETLDDSDYICFDG----NISSSLMHDIAVHKRDGQ--KIIFEPTSGPK-CVKILDVLknSSVDYITPNL 566
                 ****5..56999999999999998888****************....******************..99999999995.777777776789******** PP

                 HHHHHHHTS CS
        PfkB 192 eElealtge 200
                 +El++l+++
  EPX71355.1 567 YELDILFEA 575
                 ****99875 PP

  == domain 2  score: 34.8 bits;  conditional E-value: 1.8e-12
                 HSHHHHHHHHHHHHHTTSSEEEEEEGGGEEEEEE.................TTEEEEEEE.SS..SS-SBGTTHHHHHHHHHHHHHHTTHHHHHHHHHH CS
        PfkB 203 edieealaalhklkakgaktvvvtlGkeGalvve.................kdgelkvpavpk..vkvvDttGAGDsfvggflaallegksleealrfa 282
                  +++ +l+++ ++++ ++k+++++lG++Gal+v+                 ++ +lk  +vp   +k ++  G+GD+fvg + a l+e+  + +a+  a
  EPX71355.1 616 LTENGILQKCLHILP-FVKNIIIKLGSKGALLVSsdeikgllinsnslctpGKVVLKYYPVPDviKKCINGSGTGDTFVGVLSALLSENRGMDDAINTA 713
                 466777777666554.68********************************96666555555431179******************************** PP

                 HHHHHHHHTSSSS CS
        PfkB 283 navAalvvqkkga 295
                 +++A +++q+k +
  EPX71355.1 714 QKAAGMSLQSKAS 726
                 *********9865 PP

>> Phos_pyr_kin  Phosphomethylpyrimidine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0     0.019   1.2e+02     119     145 ..     558     585 ..     546     598 .. 0.70
   2 ?    8.0   0.0   0.00028       1.7     195     239 ..     684     728 ..     632     734 .. 0.88

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.019
                   G-SEEE-BHHHHHHHHT.---SSHHHHH CS
  Phos_pyr_kin 119 latvitPNlpEaeaLlg.ekikteedmk 145
                    ++ itPNl E+  L +  k + + + +
    EPX71355.1 558 SVDYITPNLYELDILFEaIKQRGLCETD 585
                   5788**********99844444444555 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.00028
                   --BTHHHHHHHHHHHHHHCTSSHHHHHHHHHHHHHHHHHCG-BST CS
  Phos_pyr_kin 195 nthGtGCtlssaiaaelakgesleeAvkkAkeyvteaikealelg 239
                   n  GtG+t+  ++ a l++++ + +A+++A++    +++++ ++ 
    EPX71355.1 684 NGSGTGDTFVGVLSALLSENRGMDDAINTAQKAAGMSLQSKASVS 728
                   467****************************98888887766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (737 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       370  (0.020637); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.64u 0.26s 00:00:00.90 Elapsed: 00:00:00.45
# Mc/sec: 4903.84
//
Query:       EPX71356.1  [L=1013]
Description: RNA-binding protein Prp24 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.4e-49  163.7   0.4      3e-13   49.4   0.0    4.6  4  RRM_1         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
    2.2e-25   88.3   0.1    3.8e-20   71.5   0.0    4.3  4  RRM_occluded  Occluded RNA-recognition motif
    7.6e-06   26.0   2.1        1.6    8.9   0.0    5.0  5  RRM_7         RNA recognition motif
    0.00012   21.7   0.3        2.4    7.8   0.0    4.3  5  RRM_5         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
     0.0068   15.9   1.2      0.016   14.7   1.2    1.7  1  Lsm_interact  Lsm interaction motif
     0.0097   15.8   0.0      0.089   12.8   0.0    2.7  2  RL            RL domain
  ------ inclusion threshold ------
      0.018   15.1   1.5          5    7.2   0.2    4.4  5  RRM_3         RNA binding motif
      0.055   14.0   5.5        9.2    6.8   0.1    3.7  3  Imm59         Immunity protein 59
       0.29   11.2   1.7          4    7.5   0.0    3.5  4  RNA_bind      RNA binding domain


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.9   0.1   6.5e-14   1.3e-10       1      69 [.     587     652 ..     587     653 .. 0.95
   2 !   44.5   0.0   4.9e-15   9.7e-12       1      67 [.     662     727 ..     662     728 .. 0.96
   3 !   49.4   0.0   1.5e-16     3e-13       1      69 [.     753     821 ..     753     822 .. 0.97
   4 !   23.6   0.0   1.7e-08   3.4e-05       3      70 .]     873     935 ..     871     935 .. 0.92

  Alignments for each domain:
  == domain 1  score: 40.9 bits;  conditional E-value: 6.5e-14
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 + V+nLp+d+te++L ++F+++G++  i ++ d  +  k+ a +eF   ++  +A+   + k+++g+e+
  EPX71356.1 587 VLVSNLPHDITEKDLQQFFKECGKVLQILIYDD--NHGKKLAQIEFSETSEVLAAKT-KDIKQIKGHEI 652
                 679*****************************9..8889******************.999*****998 PP

  == domain 2  score: 44.5 bits;  conditional E-value: 4.9e-15
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggr 67 
                 l+V+n+pp+ +e+++ +lFs +G+++ ++ ++ + +++++f++V++ ++e+A +Al+ l+ k l+ r
  EPX71356.1 662 LYVTNFPPTFDENKITDLFSTYGRVVQVRFPSLKYDTNRRFCYVQMSTPEEAYHALQ-LHSKVLETR 727
                 8********************************************************.*99998765 PP

  == domain 3  score: 49.4 bits;  conditional E-value: 1.5e-16
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrel 69 
                 l+++n+ +dv++++++e+F k+G ++s++l+++ +t+ ++gf++V + s+++Ae+Al+   gk lg+r+l
  EPX71356.1 753 LYLTNVDFDVNDSQVREFFIKYGTVESVRLPSKaSTKGHMGFGYVIMSSSSEAENALS-AAGKVLGKRVL 821
                 799*******************************************************.99999999986 PP

  == domain 4  score: 23.6 bits;  conditional E-value: 1.7e-08
                 EESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1   3 VgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrelk 70 
                 + n+ ++++e  L+ +F+++G+i ++ l ++     +  a+Ve+ +  +A kA  a+ g+kl grel+
  EPX71356.1 873 IINVDQTINEPRLRSVFEPYGEIFRVVLHPE-----HEGAIVEYVDIHNAGKAALAVEGMKLSGRELH 935
                 67999******************77777775.....999**************************996 PP

>> RRM_occluded  Occluded RNA-recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.1     0.011        22       3      48 ..     586     633 ..     584     654 .. 0.84
   2 ?   -0.1   0.0      0.42   8.3e+02       2      32 ..     660     689 ..     659     726 .. 0.88
   3 !    5.7   0.0    0.0068        14       4      36 ..     753     784 ..     750     821 .. 0.90
   4 !   71.5   0.0   1.9e-23   3.8e-20       2      78 ..     869     944 ..     868     945 .. 0.97

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.011
  RRM_occluded   3 tisllplsDtvnkariralveekegeikkivLvpdheG...Aivefkde 48 
                   t+ + +l+  ++++ ++++++e  g++ +i++  d++G   A +ef+++
    EPX71356.1 586 TVLVSNLPHDITEKDLQQFFKEC-GKVLQILIYDDNHGkklAQIEFSET 633
                   567889*****************.***********99977777888655 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.42
  RRM_occluded   2 rtisllplsDtvnkariralveekegeikki 32 
                    t+ + +++ t  +++i++l++++ g+++++
    EPX71356.1 660 TTLYVTNFPPTFDENKITDLFSTY-GRVVQV 689
                   6899999*****************.888876 PP

  == domain 3  score: 5.7 bits;  conditional E-value: 0.0068
  RRM_occluded   4 isllplsDtvnkariralveekegeikkivLvp 36 
                   + l ++   vn++++r+++ ++ g ++ + L +
    EPX71356.1 753 LYLTNVDFDVNDSQVREFFIKY-GTVESVRLPS 784
                   667788889*************.***9998865 PP

  == domain 4  score: 71.5 bits;  conditional E-value: 1.9e-23
  RRM_occluded   2 rtisllplsDtvnkariralveekegeikkivLvpdheGAivefkdekiagkasLaLdgsefegkklrcGtvkdLkk 78 
                   +++++ ++  t+n+ r+r+++e++ gei ++vL+p+heGAive+ d + agka+La +g++++g++l++ tv+++++
    EPX71356.1 869 KSLGIINVDQTINEPRLRSVFEPY-GEIFRVVLHPEHEGAIVEYVDIHNAGKAALAVEGMKLSGRELHVTTVNEMMH 944
                   6899********************.**************************************************87 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       7.3   1.4e+04      17      35 ..     212     231 ..     209     253 .. 0.63
   2 ?    1.4   0.1      0.18   3.5e+02      55      80 ..     494     519 ..     487     536 .. 0.84
   3 !    8.9   0.0   0.00078       1.6       4      29 ..     587     612 ..     585     631 .. 0.92
   4 ?    5.2   0.0     0.011        22       5      39 ..     663     699 ..     660     723 .. 0.75
   5 ?    5.2   0.0     0.011        22       4      58 ..     753     800 ..     750     832 .. 0.74

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 7.3
       RRM_7  17 elkatfkefgkvlv.dwPkk 35 
                 ++ +tf++f++ +  +w ++
  EPX71356.1 212 QVGDTFSSFSSFVTnNWSQE 231
                 67788888887665145444 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.18
       RRM_7  55 lvfedeksvkaLleacteeeeelylk 80 
                 l+fe  +sv +L ++c +  +++y  
  EPX71356.1 494 LLFEFYESVVTLNHDCFTSISQFYDF 519
                 89****************99999854 PP

  == domain 3  score: 8.9 bits;  conditional E-value: 0.00078
       RRM_7   4 vFvGGlPiDiteeelkatfkefgkvl 29 
                 v v  lP Dite++l++ fke gkvl
  EPX71356.1 587 VLVSNLPHDITEKDLQQFFKECGKVL 612
                 78999*****************9985 PP

  == domain 4  score: 5.2 bits;  conditional E-value: 0.011
       RRM_7   5 FvGGlPiDiteeelkatfkefgkv.lvdwPkk.aesk 39 
                 +v   P+  +e+++++ f+++g+v +v +P   + ++
  EPX71356.1 663 YVTNFPPTFDENKITDLFSTYGRVvQVRFPSLkYDTN 699
                 77889999**************962699998633333 PP

  == domain 5  score: 5.2 bits;  conditional E-value: 0.011
       RRM_7   4 vFvGGlPiDiteeelkatfkefgkv.lvdwPkkaeskkkaaenskaakgyvflvfe 58 
                 +++  +  D++++++ + f ++g+v +v  P ka +k ++        g+ +++ +
  EPX71356.1 753 LYLTNVDFDVNDSQVREFFIKYGTVeSVRLPSKASTKGHM--------GFGYVIMS 800
                 67778999***************98458888887665443........44444444 PP

>> RRM_5  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       3.8   7.7e+03      87     101 ..     252     266 ..     237     273 .. 0.71
   2 ?   -0.5   0.0      0.45   8.9e+02      24      77 ..     582     636 ..     561     659 .. 0.73
   3 !    5.0   0.0    0.0086        17      29      81 ..     662     717 ..     647     739 .. 0.75
   4 ?    2.7   0.0     0.044        88      39     104 ..     762     831 ..     732     848 .. 0.71
   5 !    7.8   0.0    0.0012       2.4      37      98 ..     878     938 ..     853     951 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 3.8
       RRM_5  87 aklfgkrlevalSKq 101
                 +k+++++l++  S +
  EPX71356.1 252 KKIYDNELQLSASNH 266
                 567777777777766 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.45
       RRM_5  24 aegsVllVyglepdkvnldklFnlfclYgnvervkflktkketal..vqmgdasav 77 
                  e+  +lV++l +d ++ + l  +f   g v ++ +    +++ l  ++ +++s+v
  EPX71356.1 582 REEFTVLVSNLPHD-ITEKDLQQFFKECGKVLQILIYDDNHGKKLaqIEFSETSEV 636
                 55667899999776.67788999999999999999998887765511555565555 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.0086
       RRM_5  29 llVyglepdkvnldklFnlfclYgnvervkflktkket....alvqmgdasaverav 81 
                 l V+++ p ++  +k+  lf+ Yg v +v+f   k +t      vqm+   ++  a+
  EPX71356.1 662 LYVTNFPP-TFDENKITDLFSTYGRVVQVRFPSLKYDTnrrfCYVQMSTPEEAYHAL 717
                 56677654.57889999**************76665552222578887776666655 PP

  == domain 4  score: 2.7 bits;  conditional E-value: 0.044
       RRM_5  39 vnldklFnlfclYgnvervkf.....lktkketalvqmgdasaveravqHLnnaklfgk.rlevalSKqqav 104
                 vn +++  +f  Yg ve v++      k   +   v m+++s++e a++   + k+ gk  l+v++S  ++ 
  EPX71356.1 762 VNDSQVREFFIKYGTVESVRLpskasTKGHMGFGYVIMSSSSEAENALSA-AG-KVLGKrVLNVVISQPKKA 831
                 677888899999*****99983332223345667899********99984.44.455775799999986543 PP

  == domain 5  score: 7.8 bits;  conditional E-value: 0.0012
       RRM_5  37 dkvnldklFnlfclYgnvervkflktkketalvqmgdasaveravqHLnnaklfgkrleval 98 
                 +++n  +l  +f  Yg++ rv +l+  +e a+v+  d  ++ +a   +++ kl g++l+v+ 
  EPX71356.1 878 QTINEPRLRSVFEPYGEIFRV-VLHPEHEGAIVEYVDIHNAGKAALAVEGMKLSGRELHVTT 938
                 46888899999*********9.57888899**************************999975 PP

>> Lsm_interact  Lsm interaction motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   1.2   7.9e-06     0.016       2      17 ..     992    1007 ..     991    1009 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 7.9e-06
  Lsm_interact    2 astakPmSNDDFRKMF 17  
                    ++ ++P+ NDDFRK +
    EPX71356.1  992 MQIDPPKTNDDFRKFL 1007
                    7899**********66 PP

>> RL  RL domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.0   4.5e-05     0.089      14      63 ..     584     636 ..     573     643 .. 0.81
   2 ?   -2.5   0.0       2.6   5.2e+03      20      41 ..     666     687 ..     664     691 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 4.5e-05
          RL  14 ersvLi.scpskisekkllkylsqhGkinkhFfYe.skgv.yavvEFsekesi 63 
                 e +vL+ ++p++i+ek+l +++ + Gk+ +   Y  ++g   a +EFse   +
  EPX71356.1 584 EFTVLVsNLPHDITEKDLQQFFKECGKVLQILIYDdNHGKkLAQIEFSETSEV 636
                 669999459*************************7246667999***987654 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 2.6
          RL  20 scpskisekkllkylsqhGkin 41 
                 + p+ + e+k+ + +s +G++ 
  EPX71356.1 666 NFPPTFDENKITDLFSTYGRVV 687
                 578889999**********985 PP

>> RRM_3  RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       3.5     7e+03       7      38 ..      56      88 ..      53     107 .. 0.76
   2 ?    7.2   0.2    0.0025         5       6      73 ..     589     656 ..     585     660 .. 0.75
   3 ?   -0.2   0.0       0.5     1e+03      15      55 ..     673     718 ..     664     736 .. 0.66
   4 ?    1.8   0.0      0.12   2.4e+02      12      57 ..     761     812 ..     753     840 .. 0.70
   5 ?   -0.8   0.0      0.78   1.6e+03      11      66 ..     878     933 ..     872     940 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 3.5
                EE-SSS--..HHHHHHHCHCCS-ECEEEE-TTSS CS
       RRM_3  7 sGlnkels..redikellsklgevayvdyekgdk 38
                +Gl+++l+  re+++ l+    e  +++y +++k
  EPX71356.1 56 HGLKEDLHaaRERFQSLFPLS-EDIWIEYLEDEK 88
                677888777788888888654.445888888876 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0025
                 EEE-SSS--HHHHHHHCHCCS-ECEE...EE-TTSSEEEEEESSHHHHHHHHHHHHHC-B-CCTSSEEEEE CS
       RRM_3   6 lsGlnkelsredikellsklgevayv...dyekgdkegevrFkedeeakkalekateaklkikdaevtlel 73 
                 +s l ++++ +d+++++++ g+v  +   d ++g+k +++ F e +e   +  k +++ ++ik +e+++++
  EPX71356.1 589 VSNLPHDITEKDLQQFFKECGKVLQIliyDDNHGKKLAQIEFSETSE--VLAAKTKDI-KQIKGHEISVQI 656
                 555678999************7776644488999999*****99944..444455555.678888888765 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.5
                 HHHHHHHCHCCS...-ECE..EEE-TTSSEEEEEESSHHHHHHHHH CS
       RRM_3  15 redikellsklg...evay..vdyekgdkegevrFkedeeakkale 55 
                  ++i +l+s +g   +v++    y  +   ++v+  ++eea +al+
  EPX71356.1 673 ENKITDLFSTYGrvvQVRFpsLKYDTNRRFCYVQMSTPEEAYHALQ 718
                 578999******4444444223444555567777777777766654 PP

  == domain 4  score: 1.8 bits;  conditional E-value: 0.12
                 S--HHHHHHHCHCCS-ECEEEE-TTS.SEEEEEE.....SSHHHHHHHHHHH CS
       RRM_3  12 elsredikellsklgevayvdyekgd.kegevrF.....kedeeakkaleka 57 
                 ++  ++++e++ k+g+v+ v + + + ++g++ F      +++ea++al +a
  EPX71356.1 761 DVNDSQVREFFIKYGTVESVRLPSKAsTKGHMGFgyvimSSSSEAENALSAA 812
                 567789************9998655414455444111115566666666555 PP

  == domain 5  score: -0.8 bits;  conditional E-value: 0.78
                 SS--HHHHHHHCHCCS-ECEEEE-TTSSEEEEEESSHHHHHHHHHHHHHC-B-CCT CS
       RRM_3  11 kelsredikellsklgevayvdyekgdkegevrFkedeeakkalekateaklkikd 66 
                 + +   +++ +++ +ge+  v ++ + + + v + + ++a ka  +   +kl  ++
  EPX71356.1 878 QTINEPRLRSVFEPYGEIFRVVLHPEHEGAIVEYVDIHNAGKAALAVEGMKLSGRE 933
                 55667788999999999999999999999999998888877776666555555555 PP

>> Imm59  Immunity protein 59
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.1    0.0046       9.2      45      78 ..     148     181 ..     137     188 .. 0.92
   2 ?    6.2   0.5    0.0073        15      22      77 ..     220     277 ..     204     287 .. 0.87
   3 ?    0.2   0.1      0.52     1e+03      45      83 ..     500     538 ..     493     550 .. 0.74

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0046
       Imm59  45 evyatadrasisgklefenfeeAkekFleilesi 78 
                  vy+  +ra+ + k++f++ +   e+Fle+le++
  EPX71356.1 148 DVYSLFERAYEICKYHFSQSQIIWEQFLEFLEET 181
                 59*****************************976 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.0073
       Imm59  22 ysif..eeekreeyevrieyknekyevyatadrasisgklefenfeeAkekFleiles 77 
                 +s f  ++ ++eeyev +  +n+ ye++  + +  + ++l+ +  ++  e +++il+s
  EPX71356.1 220 FSSFvtNNWSQEEYEVIMSNTNKVYEMNLSKYKKIYDNELQLSASNHSLECYMDILNS 277
                 5555668899************************9999**********9999999986 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.52
       Imm59  45 evyatadrasisgklefenfeeAkekFleilesivlinr 83 
                 e   t ++   +  ++f +f++Ak+ F+++  +   +n+
  EPX71356.1 500 ESVVTLNHDCFTSISQFYDFTQAKSLFVKRSLTSQAQNQ 538
                 5555666667778899***********997555555555 PP

>> RNA_bind  RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1       2.3   4.6e+03      42      75 ..     219     253 ..     210     256 .. 0.72
   2 ?   -0.3   0.0      0.54   1.1e+03      11      35 ..     587     611 ..     576     621 .. 0.78
   3 ?    7.5   0.0     0.002         4      11      36 ..     661     687 ..     653     733 .. 0.73
   4 ?   -1.8   0.0       1.6   3.2e+03      28      74 ..     888     940 ..     884     944 .. 0.56

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 2.3
                 TTEEEEEEE.EE-HHHHHHHHHTT-SS-----HHH CS
    RNA_bind  42 dtsAfvaLh.rrdqasvvlktlkkeasykiqtyae 75 
                 + s fv+ +  +++ +v++++ +k  ++++ +y++
  EPX71356.1 219 SFSSFVTNNwSQEEYEVIMSNTNKVYEMNLSKYKK 253
                 45777776524667778888888888888888875 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.54
                 EEEEE--TT--HHHHHHHTTTSEEE CS
    RNA_bind  11 vfyvtFPkeWktsDivqlFspfGsv 35 
                 v+    P++  ++D++q F+  G+v
  EPX71356.1 587 VLVSNLPHDITEKDLQQFFKECGKV 611
                 555678999999**********998 PP

  == domain 3  score: 7.5 bits;  conditional E-value: 0.002
                 EEEEE.--TT--HHHHHHHTTTSEEEE CS
    RNA_bind  11 vfyvt.FPkeWktsDivqlFspfGsvy 36 
                  +yvt FP ++ ++ i++lFs++G v 
  EPX71356.1 661 TLYVTnFPPTFDENKITDLFSTYGRVV 687
                 467766******************863 PP

  == domain 4  score: -1.8 bits;  conditional E-value: 1.6
                 HTTTSEEEE..EEEEETTEE...EEEEEEE-HHHHHHHHH.TT-SS-----HH CS
    RNA_bind  28 lFspfGsvy..vsWlddtsA...fvaLhrrdqasvvlktl.kkeasykiqtya 74 
                  F+p+G+++  v   +   A   +v +h+  +a+ +++ +  +  +++++t +
  EPX71356.1 888 VFEPYGEIFrvVLHPEHEGAiveYVDIHNAGKAALAVEGMkLSGRELHVTTVN 940
                 57777766421222222222222788888888888888874445566666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1013 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1026  (0.0572257); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.78u 0.28s 00:00:01.06 Elapsed: 00:00:00.46
# Mc/sec: 6687.52
//
Query:       EPX71357.1  [L=710]
Description: NatC N-acetyltransferase complex subunit Mak10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.3e-42  144.4   1.1    3.1e-42  144.0   0.2    1.7  2  Mak10           Mak10 subunit, NatC N(alpha)-terminal acetylt
  ------ inclusion threshold ------
      0.091   12.7   0.1       0.25   11.3   0.1    1.7  1  NTase_sub_bind  Nucleotidyltransferase substrate binding prot


Domain annotation for each model (and alignments):
>> Mak10  Mak10 subunit, NatC N(alpha)-terminal acetyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.0   0.2   3.4e-46   3.1e-42       2     167 ..      55     208 ..      54     209 .. 0.95
   2 ?   -2.5   0.0      0.35   3.1e+03      38     136 ..     658     689 ..     629     698 .. 0.56

  Alignments for each domain:
  == domain 1  score: 144.0 bits;  conditional E-value: 3.4e-46
       Mak10   2 gqlvkdesFtLfeavsAleimdpkmDsgliapeleeeeedfdvsapllpeevlgimdrllasemaWhsgssLsqTvftclYveklllpspkalkeakfs 100
                 ++l++ +sFtL++++sA+eimdpkmDsg++++e      + d+ ++l+p e+l imd ++ +e +Wh g ++s+++f++ +v ++++   +++k+  fs
  EPX71357.1  55 EELICHPSFTLLDSISAFEIMDPKMDSGINYSE-----TNVDIAKALNPVEILTIMDGIFTAESDWHYGIPMSESIFCSKHVFDVCKTPISRVKDMGFS 148
                 89****************************665.....468*******************************************************985 PP

       Mak10 101 rkedeekektelelvdkvLrayvlalvkfcdlvleelskevlyeeEDfvtnkyglslleeieveevi 167
                        +k+ ++l+d vL++yvl+++k cd+v++e+ ++++y+eED+++ +y+lslle+++ e++ 
  EPX71357.1 149 -------RKKLDTLTDLVLFPYVLGVIKSCDYVRKEFLTGNMYDEEDMSSFSYQLSLLETYPMEKIY 208
                 .......456679*************************************************99986 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.35
       Mak10  38 eeedfdvsapllpeevlgimdrllasemaWhsgssLsqTvftclYveklllpspkalkeakfsrkedeekektelelvdkvLrayvlalvkfcdlvlee 136
                  e ++d +                                                                   + + k L  +++a + + + ++e+
  EPX71357.1 658 HELSYDLQ-------------------------------------------------------------------KNYLKELMCCCIANIVTLQDFHES 689
                 33333333...................................................................344444555555555555555555 PP

>> NTase_sub_bind  Nucleotidyltransferase substrate binding protein like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   2.8e-05      0.25       9      69 ..     611     670 ..     604     692 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 2.8e-05
                     HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSCCTTTHHHHH CS
  NTase_sub_bind   9 AlasLeeavelsrddplsdlerdgvIqrFEftyElawkllkryleeegisaeavsprdliR 69 
                     +l++L+e ve + ++  ++ + +g+ q+FE +  + +k+lk  +e+ +++ +   +++ ++
      EPX71357.1 611 SLSQLRENVEYH-QSLPKERLLEGTLQSFEESKKTLLKVLKLPMESSQHELSYDLQKNYLK 670
                     789*******86.5888888899**********************9888654433455555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (710 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       475  (0.0264934); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.51
# Mc/sec: 4213.38
//
Query:       EPX71358.1  [L=525]
Description: ARS binding protein Abp2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.5e-54  183.9   0.1    4.1e-54  183.2   0.1    1.3  1  Abp2           ARS binding protein 2
     0.0015   18.3   0.3     0.0075   16.0   0.0    2.3  2  HEPN_DZIP3     DZIP3/ hRUL138-like HEPN
     0.0021   18.1   0.2     0.0048   17.0   0.2    1.6  1  DUF2730        Protein of unknown function (DUF2730)
  ------ inclusion threshold ------
      0.025   14.6   1.6      0.049   13.7   1.6    1.5  1  Bap31_Bap29_C  Bap31/Bap29 cytoplasmic coiled-coil domain
      0.052   13.3   0.4       0.12   12.2   0.4    1.5  1  DivIC          Septum formation initiator
       0.42   10.5   1.6       0.92    9.4   1.6    1.5  1  PKcGMP_CC      Coiled-coil N-terminus of cGMP-dependent prote
        7.1    6.9   8.6         15    5.9   8.6    1.6  1  AT_hook        AT hook motif


Domain annotation for each model (and alignments):
>> Abp2  ARS binding protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  183.2   0.1   1.6e-57   4.1e-54       1     154 [.       7     153 ..       7     161 .. 0.95

  Alignments for each domain:
  == domain 1  score: 183.2 bits;  conditional E-value: 1.6e-57
        Abp2   1 lPsr.dvtdetiedayvafilycnpavpldtdtselrkafrapPksdgksfsiftlfelikkleekeiktWaelalelGveppdaekeqstqkvqqyav 98 
                 lPsr d+++++i++++++f+l+cnp++ + +dt++l +af+++Pks+g++f+i++lf li+++++k i +W++l+  lGve++d   eqs+qk+qqy v
  EPX71358.1   7 LPSRlDINADNITEKFCQFCLCCNPWY-AGADTRQLATAFNSIPKSEGQKFDIWVLFLLIRQYHQKVISSWSKLVGFLGVERKD---EQSSQKIQQYVV 101
                 688746********************9.799***************************************************77...9*********** PP

        Abp2  99 rlkrWmramhvdaffeylldkpheyyteipeeseelaeevrdgvaleedlalrall 154
                 rlkrWm++mhvdaff+yll++p+eyy eip    e++ + r +v++++dl+++ l 
  EPX71358.1 102 RLKRWMNQMHVDAFFDYLLNRPNEYYLEIP----ESQPQLRSNVNINDDLVIKGLR 153
                 ******************************....467899*************996 PP

>> HEPN_DZIP3  DZIP3/ hRUL138-like HEPN
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   2.9e-06    0.0075      26      93 ..      40     111 ..      33     115 .. 0.71
   2 ?   -1.9   0.1      0.98   2.5e+03       7     136 ..     504     521 ..     494     524 .. 0.58

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 2.9e-06
  HEPN_DZIP3  26 QwekLypasgsvvssedfDitLLvlLlRnicglkppstgWdkl.........Paatdtskeadivrikyfrnelygh 93 
                 Q  + + +  ++ + ++fDi +L+lL+R+ ++     + W+kl          +++ ++ ++ +vr+k+  n++  h
  EPX71358.1  40 QLATAFNSIPKS-EGQKFDIWVLFLLIRQYHQK--VISSWSKLvgflgverkDEQSSQKIQQYVVRLKRWMNQM--H 111
                 555666665565.889************99943..345776655555433224556688889999***999998..4 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.98
  HEPN_DZIP3   7 vlaknkvkleklkkvlnksQwekLypasgsvvssedfDitLLvlLlRnicglkppstgWdklPaatdtskeadivrikyfrnelyghaskasisdedFe 105
                  l+++                                                                                              
  EPX71358.1 504 ELRQK---------------------------------------------------------------------------------------------- 508
                 33333.............................................................................................. PP

  HEPN_DZIP3 106 klWkeisdalvrLggkkyqeeidklktesid 136
                                   ++ei++lk++ ++
  EPX71358.1 509 ------------------NNEIENLKRKVMN 521
                 ..................5666666666665 PP

>> DUF2730  Protein of unknown function (DUF2730)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.2   1.9e-06    0.0048      34      93 ..     460     519 ..     436     521 .. 0.88

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 1.9e-06
     DUF2730  34 dleklaekveendkrlteletkvenLPtakdlekLkllladlrgelkaleaevrqlshqv 93 
                 +l+ l+e    +d  ++++++ v++L + + +++Lkl++a+l++el++ ++e+++l+++v
  EPX71358.1 460 NLQALTEPTILKDATVQRTNSAVSTLGSLDSVSTLKLEIAKLNAELRQKNNEIENLKRKV 519
                 667777777788999*****************************************9986 PP

>> Bap31_Bap29_C  Bap31/Bap29 cytoplasmic coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   1.6   1.9e-05     0.049       2      23 ..     497     518 ..     496     521 .. 0.93

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.9e-05
  Bap31_Bap29_C   2 eiekLkkeLkkkkkDlealKkQ 23 
                    ei+kL++eL +k++++e+lK++
     EPX71358.1 497 EIAKLNAELRQKNNEIENLKRK 518
                    9*******************86 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.4   4.6e-05      0.12      15      48 ..     487     520 ..     479     522 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 4.6e-05
                 XXXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
       DivIC  15 gllaykqlkqeiaalqaelaklkaeneeLeaevk 48 
                 +l +++ lk eia+l+ael ++++e+e+L+++v 
  EPX71358.1 487 SLDSVSTLKLEIAKLNAELRQKNNEIENLKRKVM 520
                 66678899**********************9985 PP

>> PKcGMP_CC  Coiled-coil N-terminus of cGMP-dependent protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   1.6   0.00036      0.92      10      30 ..     498     518 ..     496     519 .. 0.93

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00036
   PKcGMP_CC  10 IRELEkrlaekdeEIqELrsk 30 
                 I+ L + l++k  EI+ L++k
  EPX71358.1 498 IAKLNAELRQKNNEIENLKRK 518
                 78899***************8 PP

>> AT_hook  AT hook motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   8.6    0.0057        15       1      13 []     324     336 ..     324     336 .. 0.90

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0057
     AT_hook   1 kRkRGRPrKaatk 13 
                 +RkRGRP+ a++k
  EPX71358.1 324 PRKRGRPPGARNK 336
                 7*******99885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (525 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1293  (0.0721178); expected 358.6 (0.02)
Passed bias filter:                      704  (0.039266); expected 358.6 (0.02)
Passed Vit filter:                        99  (0.00552178); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.65u 0.30s 00:00:00.95 Elapsed: 00:00:00.47
# Mc/sec: 3330.04
//
Query:       EPX71359.1  [L=621]
Description: CENP-C protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-24   85.8   0.1    7.9e-24   83.7   0.0    2.2  2  CENP-C_C  Mif2/CENP-C like
     0.0025   17.5   0.0     0.0051   16.5   0.0    1.5  1  Cupin_2   Cupin domain
  ------ inclusion threshold ------
       0.82    9.7  18.7        5.3    7.3   5.8    3.3  2  AT_hook   AT hook motif
        3.9    8.2  37.7        3.5    8.3  26.9    4.1  2  Mif2_N    Kinetochore CENP-C fungal homologue, Mif2, N-termin


Domain annotation for each model (and alignments):
>> CENP-C_C  Mif2/CENP-C like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.14   6.4e+02      61      82 ..     503     524 ..     496     524 .. 0.89
   2 !   83.7   0.0   1.8e-27   7.9e-24       2      85 .]     519     603 ..     518     603 .. 0.98

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.14
                 EEE-TT-EEEEEE-SSS-EEEE CS
    CENP-C_C  61 FqvPagneysieNklnkeaklf 82 
                 +  P+   y+i+N++ k a lf
  EPX71359.1 503 YALPSVKLYQIRNQQTKFASLF 524
                 6789**********99999987 PP

  == domain 2  score: 83.7 bits;  conditional E-value: 1.8e-27
                 EEEEE--TT.S-EEEEEEE-TCCCEEEEE--SEEEEEEEEESEEEEEETTEEEEEETT-EEEE-TT-EEEEEE-SSS-EEEEEEE CS
    CENP-C_C   2 klaklldkk.flasGilkLppgaeKkkknskkatlvFyViqGrvevtvsktsfvigkgsvFqvPagneysieNklnkeaklfFvq 85 
                 k+a l++ + f+++Gil+Lp+g eK  k sk++ + F+++qG +e+ v+ t f++ + +vF+vP+gn+ysi+N++++ a+l+++q
  EPX71359.1 519 KFASLFSDPnFFGAGILELPVGSEKPVKPSKHNLMSFCILQGYLEIMVNTTTFRMRREGVFIVPRGNYYSIKNIGHDVARLYYTQ 603
                 79999***88*************************************************************************98 PP

>> Cupin_2  Cupin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   1.1e-06    0.0051       4      68 ..     536     600 ..     533     602 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 1.1e-06
                 EEETTEEEEEECSSSEEEEEEEEESEEEEEECTEEEEEETTEEEEE-TT-EEEEEE-SSS-EEEE CS
     Cupin_2   4 elppGesapshrHpgedeffyVleGegeltvdgeeveleaGdsvyfpagtpHrfrNtgdeparll 68 
                 elp G + p    +++   f +l+G++e+ v+  ++++++  ++++p+g    ++N g++ arl+
  EPX71359.1 536 ELPVGSEKPVKPSKHNLMSFCILQGYLEIMVNTTTFRMRREGVFIVPRGNYYSIKNIGHDVARLY 600
                 5666665553332222247899*************************************999986 PP

>> AT_hook  AT hook motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   4.9     0.002       8.9       2      10 ..     317     325 ..     316     326 .. 0.88
   2 ?    7.3   5.8    0.0012       5.3       1      10 [.     350     359 ..     350     361 .. 0.92

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.002
     AT_hook   2 RkRGRPrKa 10 
                 ++RGRPrK 
  EPX71359.1 317 KRRGRPRKQ 325
                 89******7 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0012
     AT_hook   1 kRkRGRPrKa 10 
                 kR+RGRP+K+
  EPX71359.1 350 KRRRGRPKKK 359
                 8********7 PP

>> Mif2_N  Kinetochore CENP-C fungal homologue, Mif2, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3  26.9   0.00078       3.5       1     124 [.      16     136 ..      16     322 .. 0.84
   2 ?   -2.8   3.0       2.2   9.8e+03      42     105 ..     375     438 ..     328     470 .. 0.65

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00078
      Mif2_N   1 ysnvGkaGRkTGvtlkdtgvrDehGlepidglFSsPeks..ekengeeeeeeededesge.edmdleessgpepadllsgrr.essrlplprarSPakt 95 
                 ++++G++GRkTG t+++  ++   G++++d+ F s  +   e+e++e +++e  +++++   + d++e++   p + +s+   e+++ p     SP+  
  EPX71359.1  16 FFEIGVVGRKTGFTVPQDVKKGADGFDDMDAYFLSDGSIhlEDEQDEPSNQEIAQKRTAPlVSPDVNEQNHDSPVNPHSDSFqERENEP---PSSPL-- 109
                 689******************************99998877666666666666666666678889999977777777666653333333...35665.. PP

      Mif2_N  96 slksparrnsslaresqeerpsssPsraa 124
                  ++s+a r s     s+    s+sP+r++
  EPX71359.1 110 LMNSKALRASREF--SAPLMASKSPTRSS 136
                 4566777666544..45555666776654 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 2.2
      Mif2_N  42 engeeeeeeededesgeedmdleessgpepadllsgrressrlplprarSPaktslksparrns 105
                 ++  ++e +++++e+  e +  ++ + + p ++ +++r   +l  +++++Pa   +k+  r  +
  EPX71359.1 375 QDVLNDEPRNEKHENIAEGLRRSNRTRIAPLAFWKNERVVYELQKNKTETPALPEVKGVIRIDD 438
                 3344455555556666666666666777777777777766666666666676666655544433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (621 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       987  (0.0550505); expected 358.6 (0.02)
Passed bias filter:                      324  (0.0180713); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.63u 0.28s 00:00:00.91 Elapsed: 00:00:00.43
# Mc/sec: 4343.46
//
Query:       EPX71360.1  [L=100]
Description: ribosomal protein subunit l44 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      3e-14   52.9   0.2    8.5e-14   51.5   0.0    1.7  2  MRP_L53   39S ribosomal protein L53/MRP-L53


Domain annotation for each model (and alignments):
>> MRP_L53  39S ribosomal protein L53/MRP-L53
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.5   0.0   4.7e-18   8.5e-14       2      53 .]      15      66 ..      14      66 .. 0.99
   2 ?   -1.0   0.0      0.12   2.1e+03      30      52 ..      75      96 ..      72      96 .. 0.51

  Alignments for each domain:
  == domain 1  score: 51.5 bits;  conditional E-value: 4.7e-18
     MRP_L53  2 nPFspnaksaRlFLsllskppaarnpgckiktkvlpdastseptvkVtFkDG 53
                nPFs+ ++saRl+L+l +k +a++n+g+ +++ + p+ s+  ptv+V +kDG
  EPX71360.1 15 NPFSKTSRSARLLLALANKDSARTNYGMFLTSSIAPKGSNVNPTVEVLYKDG 66
                9**************************************************9 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.12
     MRP_L53 30 kiktkvlpdastseptvkVtFkD 52
                ki++++l+d   s  + +++FkD
  EPX71360.1 75 KINVDRLSDMIDS-YSRTLKFKD 96
                5666666663222.222455665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       516  (0.0287802); expected 358.6 (0.02)
Passed bias filter:                      366  (0.0204139); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.41
# Mc/sec: 726.29
//
Query:       EPX71361.1  [L=443]
Description: F-box protein Pof12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.2e-09   35.2   0.3    1.7e-08   34.2   0.3    1.6  1  F-box-like  F-box-like
    6.6e-07   29.1   0.5    1.7e-06   27.8   0.5    1.7  1  F-box       F-box domain


Domain annotation for each model (and alignments):
>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   0.3   1.9e-12   1.7e-08       6      47 ..      16      56 ..      16      57 .. 0.93

  Alignments for each domain:
  == domain 1  score: 34.2 bits;  conditional E-value: 1.9e-12
  F-box-like  6 dEiLlqIFsyLppsdLlrlalVCrrWrrvaldtplLWrrlvl 47
                +E Ll+IF+ L+ +d+++l +V+++W+++a++  ++W++l+l
  EPX71361.1 16 HETLLHIFESLSSRDMVALERVSKSWKSIAQTS-SVWHNLFL 56
                599***************************766.*****998 PP

>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.5   1.9e-10   1.7e-06       7      46 ..      15      54 ..      13      56 .. 0.91

  Alignments for each domain:
  == domain 1  score: 27.8 bits;  conditional E-value: 1.9e-10
                -HHHHHHHHHTS-HHHHHHHCTT-HHHHHHHTTHHHHHHH CS
       F-box  7 PsevlrhILerLplsdllalrrVSkgwrilidsdrlwcks 46
                + e l+hI+e+L+ +d +al rVSk+w+++    + w+  
  EPX71361.1 15 SHETLLHIFESLSSRDMVALERVSKSWKSIAQTSSVWHNL 54
                56889****************************9999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (443 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       547  (0.0305092); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 3323.01
//
Query:       EPX71362.1  [L=193]
Description: 60S ribosomal protein L19 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.9e-61  206.3   9.2    1.9e-61  206.3   9.2    1.7  2  Ribosomal_L19e  Ribosomal protein L19e


Domain annotation for each model (and alignments):
>> Ribosomal_L19e  Ribosomal protein L19e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  206.3   9.2   1.1e-65   1.9e-61       1     143 [.       3     145 ..       3     146 .. 0.99
   2 ?   -1.5   0.8      0.13   2.3e+03      49      74 ..     156     181 ..     149     187 .. 0.61

  Alignments for each domain:
  == domain 1  score: 206.3 bits;  conditional E-value: 1.1e-65
                     -THHHHHHHHHHTTS-GGGEEE-GGGHHHHHH--SHHHHHHHHHTTSEEE-------THHHHHHHHHHHTT-S-SGGG--S-HHHHS-HHHHHHH CS
  Ribosomal_L19e   1 dlklqkrlaasvlkvGknrvwldpeeleeiaeAitredirklikdglIikkpkkgnsrararerkekkrkgrrrgsGkrkGtkeaRlpekelWik 95 
                     +l++qkrla+svlk+Gk++vw+dp+el+ei++A++r++irkl+kdgl+i+kp+ ++sr r+r+++++kr gr++g+GkrkGt+eaR+p+ ++W++
      EPX71362.1   3 NLSTQKRLASSVLKCGKRKVWMDPNELSEISNANSRQNIRKLVKDGLLIRKPNLMHSRFRIRKTHAAKRLGRHTGYGKRKGTAEARMPSAVVWMR 97 
                     589******************************************************************************************** PP

                     HHHHHHHHHHHHHHTTSS-HHHHHHHHHHHHTT--SSHHHHHHHHT-X CS
  Ribosomal_L19e  96 riRalRrlLkelrekkkidkktYrelYrkakGgefknkavLkeyiekk 143
                     r+R+lRrlL+++re++kidk+ Y++lY  akG++fk+k++L e+i+++
      EPX71362.1  98 RQRVLRRLLRKYRESGKIDKHLYHSLYLAAKGNTFKHKRALIEHIQRA 145
                     *********************************************986 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.13
                     EE-------THHHHHHHHHHHTT-S- CS
  Ribosomal_L19e  49 ikkpkkgnsrararerkekkrkgrrr 74 
                     ++++++ ++r++a +++++k  g++r
      EPX71362.1 156 QEQQDARRARSKAARLRRAKVVGEKR 181
                     55555566666666666666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1286  (0.0717274); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.44
# Mc/sec: 1305.64
//
Query:       EPX71363.1  [L=375]
Description: actin-like protein Arp10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.4e-12   45.7   0.0    5.5e-11   41.7   0.0    2.0  1  Actin     Actin


Domain annotation for each model (and alignments):
>> Actin  Actin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.7   0.0   3.1e-15   5.5e-11     112     381 ..      61     328 ..      53     347 .. 0.78

  Alignments for each domain:
  == domain 1  score: 41.7 bits;  conditional E-value: 3.1e-15
       Actin 112 kalEivfEkfkvpalylaksavlsafasgkstglvvDsGasvtsvvpVldGyvLkkairrsdlgGkaLteqlkellssknvevtprylikkkkvveaes 210
                  ++ +v + f ++a+  + sa  +  ++g++ +lv+D+G  +t ++p+ d  vL++ i+ s+ +   + +++ e l        p+++ +   v  + +
  EPX71363.1  61 TCVVLVVDLFLMKAILWMYSALTATLSAGSKDALVIDIGWYETKIIPIADLKVLSNLIHISNKSTISVIKYMHECLVAVCAASDPTNASRADLVPLSFQ 159
                 566678889999****************************************************************99766666766665555554455 PP

       Actin 211 saekeelekltesyktleeeevleeiKesvcevsedpeg....deeksssspeksYeLPDg.seiklgeeRf...kvpEiLFdpsligsesaleeeksk 301
                    ++ l++  + y  l+   +++ + e+v    ++p +     +++s++  +++  L D  ++  ++ + +    + ++LF+ +++++          
  EPX71363.1 160 GLLSSLLNSSVYPYADLDIPFTMN-AEETVRMFHNSPRNlmtlASKASHHTSQETHLLFDNcQNDRVKLQPWipaACLDSLFHGTDSTHLDLV------ 251
                 555788888888888888777765.56677677777776776633333344444455555425555555544111445777999998888774...... PP

       Actin 302 llgiselivaainacdvdlrpeLlanivvtGGnsllpglteRlekelaqlaskgvkvkiiapeeerkysaWiGGSiLAsl 381
                  + +++l+++ i+ +++dlr+ L ++i++ G  +++pg+ eR ++e+ +    g+ v + +++ +  + aW G+ i  + 
  EPX71363.1 252 EQALPNLLQKVIQLLPMDLRRPLSKKILLIGPLASIPGMLERWNHEMIA---RGMPVHCLQSHYQNPFHAWYGATISCKS 328
                 469********************************************99...89999999999999********986554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (375 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       475  (0.0264934); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.47
# Mc/sec: 2397.81
//
Query:       EPX71364.1  [L=2496]
Description: U3 snoRNP protein Utp20 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.7e-149  499.0   2.8   1.7e-149  499.0   2.8    3.2  3  DRIM      Down-regulated in metastasis
  ------ inclusion threshold ------
      0.048   13.9   0.3         10    6.7   0.0    4.8  3  HEAT      HEAT repeat
        7.9    7.2   7.5        8.3    7.1   0.2    4.5  5  MSP7_C    MSP7-like protein C-terminal domain


Domain annotation for each model (and alignments):
>> DRIM  Down-regulated in metastasis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1      0.28   1.6e+03     373     417 ..     158     200 ..      64     215 .. 0.59
   2 !  499.0   2.8  2.9e-153  1.7e-149       2     623 .]     817    1419 ..     816    1419 .. 0.94
   3 ?    0.4   0.1     0.025   1.5e+02     193     269 ..    2085    2182 ..    1949    2206 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 0.28
        DRIM 373 igselLlphvsslLeylsalleksaaskkdkskellereleiLsr 417
                 + +++L p + ++ + ls ll k++++ +    ++++++l++L+r
  EPX71364.1 158 YLRKILVPQLIHIYDILSPLLGKQKEKAHV--IRFTSEALSFLCR 200
                 334455555555555555555544322222..4455555555555 PP

  == domain 2  score: 499.0 bits;  conditional E-value: 2.9e-153
        DRIM    2 wslkdlkalLklfakfknpkalykseelyeallelLsngdeeiQklALkclltyknpaltpYkenLenLlddkkfrdeLtkfklss.ees.ieeehr 96  
                  ws++d   lL+l+++++      ++++ +e++l  Ls +d+++Q +AL++l+ yk+++l+ Y+ nL+nLlddkkfrdeLt+f++ + e+s i+e hr
  EPX71364.1  817 WSRQDVYMLLGLYSHLQGQEHTNNASKRKEFFLWGLSVSDSKVQASALDALFCYKDESLNVYEGNLKNLLDDKKFRDELTTFLFVNpEDSiIQEPHR 913 
                  9*************************************************************************************98888****** PP

        DRIM   97 aelmpvllRiLyGrmiskkgssasgkagqqarRaavLrfLaglseeelssFldlalgplkkvleaaetqgsdelkelvnkldev...dleevlplrr 190 
                   +lmpv++ iLyG+m+s +    +g+++q+arR++vL++L++++ ++l+ ++ l+l+p++++            +++vn++d +   ++  +++ rr
  EPX71364.1  914 LNLMPVVIGILYGKMTSAAY---GGQKNQNARRSTVLSTLGNMRISDLELLIGLMLRPFESLP-----------RDFVNETDPLglvKSLPIISQRR 996 
                  *****************988...6667789*****************************9773...........2223333444445899******* PP

        DRIM  191 qlgflnlledvlkelgsklapflpkllklllyclaaaqrrlkssseeeeeeeeevlasllkniRqlglkcLvdlfsnfgesedwspyldaifeevvs 287 
                  q+gfl+++e++lk+++skl+p++p +++++ly+l  a++ l ss++  ++e      +l+++iR+++lk+  ++++++++  +++py   if+ +v+
  EPX71364.1  997 QIGFLSMVEELLKQISSKLSPVAPSIVNAVLYSLLFADHILVSSNDPASPEV-----KLAHTIRHNSLKVYLSFLTSCPDV-NFGPYNVFIFKYFVH 1087
                  **************************************87777765555555.....**********************99.8************** PP

        DRIM  288 PrlekLpsenlqspsaLlkLfltWsssprlaplLakydssvlpavielLsapkakesVvefvldivenllkladeeeeeeedeeeigselLlphvss 384 
                  P+l+k+++en+qs+s L+++f +W +s  +++   +  ss+++ ++++++++++k +V+ fv++++++++ +a++e+ +e+ + ++ s ++lp+v+ 
  EPX71364.1 1088 PKLSKFATENTQSVSTLMQIFKVWFESTAYLSSVLEFGSSIVKVLLDVICQSTVKIPVILFVFEVLNSVIVQAQTEDMDEKYRRNVASVVILPNVKL 1184
                  ********************************9999************************************************************* PP

        DRIM  385 lLeylsalleksaaskkdkskellereleiLsrlaplvedseqassLldlllplLrkpsrrvsektkvelLkilenllrlyde..devdlpekllkt 479 
                  + e+ls++l k     +d ++++l+ ++ +L++++++++++ ++s+Lldll+++L+kp+r v+ ++k+++L+ ++++l++ +   +++      ++t
  EPX71364.1 1185 IFENLSEVLGKPV--FSD-NSRVLDGSVVVLTNISEFISSELDSSHLLDLLVQFLKKPKRLVPTPVKANILELFARFLPNNKPwvQASIAEPTNFET 1278
                  *********9884..344.789**********************************************************888974445777889** PP

        DRIM  480 lsslfsrlkdreaRklLcevlkalakkdpeleevadllsdLNayskrrldepDfdrRlsAFkkineekyksltleqwlpllhnclffirdeeelsir 576 
                  l+++++ +++ ++Rk+L+ +l a+++ +++l+  + + ++ N++s++rldepDf+rRlsAF+++ne++y+++t   wlp+l+nc+ffirde+elsir
  EPX71364.1 1279 LMQMYAHIDESSSRKSLNGILRAFSDVNNDLAFGSVFSEEVNSLSQKRLDEPDFERRLSAFTSLNENHYANITNLTWLPVLYNCFFFIRDEDELSIR 1375
                  ************************************************************************************************* PP

        DRIM  577 snAsellkrfieaaaskseeeps.kleleellkdillpalkrglrsks 623 
                  s+As ++krfi+++  + e + + k+   +++++ +lp +k+ +++k+
  EPX71364.1 1376 SSASLGIKRFIDTIPLNGEYD-AfKA---SIFQNSILPYIKTNMKHKN 1419
                  ***************988766.4344...89**************996 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.025
        DRIM  193 gflnlledvlkelgskl.apflpkllklllyclaaaqr.rlksssee.........eeeeeeevla.............sllkniRqlglkcLvdlf 265 
                  ++++ll  +l+++++ l +++l+ ++ +l+ +l++  + ++++ s+e         +ee+ +                 +  kn+ + g++++  lf
  EPX71364.1 2085 SIMELLHAILNNFSNTLlKEYLHGIFLALVMVLINDPEpHCREMSAEllrtvfqrvDEESYT---LirqllftwisnksNSGKNLSRVGMQLFGLLF 2178
                  56888999999999998899998888777766666665566666666777777544333332...24457788888887888888888888888888 PP

        DRIM  266 snfg 269 
                  + +g
  EPX71364.1 2179 EIYG 2182
                  8877 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.13   7.9e+02       1      18 [.    1407    1424 ..    1407    1431 .. 0.89
   2 ?   -2.5   0.1       1.6   9.5e+03       6      31 .]    1664    1689 ..    1663    1689 .. 0.81
   3 ?    6.7   0.0    0.0017        10       2      27 ..    2111    2136 ..    2110    2140 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.13
                  HHHHHHHHHT-SSHHHHH CS
        HEAT    1 llPlllkllsDpspeVRe 18  
                  +lP + +++++++ ++R+
  EPX71364.1 1407 ILPYIKTNMKHKNEFIRQ 1424
                  89***************7 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.6
                  HHHHT-SSHHHHHHHHHHHHHHHHCS CS
        HEAT    6 lkllsDpspeVReaAakaLgalaevl 31  
                  ++ l++ + e R+a+ k+L  +a+vl
  EPX71364.1 1664 CHILRSRAQESRDATRKTLSSIAKVL 1689
                  5667777888899999*******985 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.0017
                  HHHHHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT    2 lPlllkllsDpspeVReaAakaLgal 27  
                  l l++ l++Dp+p+ Re++a+ L ++
  EPX71364.1 2111 LALVMVLINDPEPHCREMSAELLRTV 2136
                  56788999*************99876 PP

>> MSP7_C  MSP7-like protein C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.0         3   1.8e+04      54      86 ..     427     456 ..     396     458 .. 0.57
   2 ?    7.1   0.2    0.0014       8.3      41      92 ..     851     899 ..     830     901 .. 0.71
   3 ?   -3.9   0.0         3   1.8e+04      91     108 ..    1838    1855 ..    1837    1863 .. 0.71
   4 ?   -3.9   0.0         3   1.8e+04      42      68 ..    2019    2046 ..    2013    2057 .. 0.71
   5 ?    1.0   0.2      0.11   6.5e+02       5      58 ..    2409    2463 ..    2373    2495 .. 0.73

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 3
      MSP7_C  54 idaffkkeenenskadslveifkkaLkdkkfre 86 
                 ++++f k   e s ++++v+   k+L++ +f +
  EPX71364.1 427 MEMVFDK---EVSLTPNIVNAVSKSLSKVSFLT 456
                 3334444...33345678999999998888865 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0014
      MSP7_C  41 vlnekEyeiikkLidaffkkeenenskadslveifkkaLkdkkfreefknfi 92 
                  l+ ++ ++    +da+f +   ++++ +     +k+ L+dkkfr+e+++f+
  EPX71364.1 851 GLSVSDSKVQASALDALFCY---KDESLNVYEGNLKNLLDDKKFRDELTTFL 899
                 66667777777777777777...334455667789***************96 PP

  == domain 3  score: -3.9 bits;  conditional E-value: 3
      MSP7_C   91 fiyglYsfaKknnylsee 108 
                  f y+++ +  k+n +  +
  EPX71364.1 1838 FCYNVFDYVTKQNAIISS 1855
                  8899****8777766544 PP

  == domain 4  score: -3.9 bits;  conditional E-value: 3
      MSP7_C   42 lnekEyeiikkLidaffkk.eenenska 68  
                  ++++ y+++ k+ d+++++ ++ ++++ 
  EPX71364.1 2019 MSAELYKLMDKIRDMMVTNhTKTTRQTC 2046
                  6677799999999999888444444444 PP

  == domain 5  score: 1.0 bits;  conditional E-value: 0.11
      MSP7_C    5 ddlydevlkne.nkkneietseyeskynnfkkeydnfvlnekEyeiikkLidaff 58  
                  ++l d v+++    + ++ t+ey + y++++++  ++  + +E   i+  +d   
  EPX71364.1 2409 QELVDTVIESLdVLQSKVGTTEYVNAYQEVRQASLDVRRERREKRAIEHVVDPAT 2463
                  5677777777745667777788888888877777777777777777777766544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2496 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       934  (0.0520944); expected 358.6 (0.02)
Passed bias filter:                      507  (0.0282782); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.17u 0.35s 00:00:01.52 Elapsed: 00:00:00.52
# Mc/sec: 14501.39
//
Query:       EPX71365.1  [L=411]
Description: transcription factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00013   22.0  11.3    0.00026   21.1  11.3    1.4  1  Zn_clus   Fungal Zn(2)-Cys(6) binuclear cluster domain


Domain annotation for each model (and alignments):
>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1  11.3   1.4e-08   0.00026       3      33 ..     356     388 ..     355     393 .. 0.88

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 1.4e-08
                 -HHHHHCT---STSSSS-HHHHHCT...HHHCCC CS
     Zn_clus   3 CdnCrkkKvKCdakkPaCsnCkkln...leCtfy 33 
                 C +Cr+ K  Cd+++P C++C+  +    eC+  
  EPX71365.1 356 CSRCRRSKKGCDRQRP-CGRCRDAGlhlDECVSD 388
                 ****************.********888899943 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (411 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1012  (0.0564449); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.74u 0.35s 00:00:01.08 Elapsed: 00:00:00.58
# Mc/sec: 2129.08
//
Query:       EPX71366.1  [L=495]
Description: hypothetical protein SOCG_01584 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (495 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       679  (0.0378716); expected 358.6 (0.02)
Passed bias filter:                      274  (0.0152825); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.31s 00:00:00.88 Elapsed: 00:00:00.50
# Mc/sec: 2973.18
//
Query:       EPX71367.1  [L=783]
Description: ribosome biogenesis factor recycling AAA family ATPase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      1e-90  301.0   0.0    6.2e-45  152.9   0.0    2.4  2  AAA              ATPase family associated with various cellul
      4e-27   93.8   5.5    1.9e-15   56.4   0.5    2.8  2  AAA_lid_3        AAA+ lid domain
    2.2e-12   47.0   0.0    0.00012   21.9   0.0    3.4  3  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    5.1e-12   46.5   1.4    0.00042   20.7   0.0    4.3  3  AAA_16           AAA ATPase domain
    1.4e-11   44.9   0.0    0.00023   21.3   0.0    2.6  2  AAA_2            AAA domain (Cdc48 subfamily)
    2.3e-10   40.6   0.1    4.9e-05   23.4   0.0    4.0  2  AAA_5            AAA domain (dynein-related subfamily)
      3e-08   34.0   2.3     0.0056   17.0   0.1    4.4  2  AAA_22           AAA domain
    1.6e-07   31.6   0.0     0.0006   20.0   0.0    3.1  3  AAA_33           AAA domain
    2.2e-06   27.7   0.0      0.012   15.7   0.0    2.6  2  AAA_14           AAA domain
    4.8e-06   26.0   0.0      0.047   12.9   0.0    2.5  2  TIP49            TIP49 P-loop domain
    5.7e-06   26.4   0.0     0.0033   17.4   0.0    3.0  3  Rad17            Rad17 P-loop domain
    6.7e-06   25.8   3.6       0.33   10.5   0.0    4.0  4  AAA_25           AAA domain
    1.3e-05   24.5   0.0      0.013   14.6   0.0    2.5  2  DUF815           Protein of unknown function (DUF815)
    2.9e-05   24.4   0.0       0.13   12.6   0.0    2.6  2  RNA_helicase     RNA helicase
    5.7e-05   22.6   0.3      0.088   12.2   0.1    2.6  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
    8.6e-05   22.8   0.0      0.053   13.8   0.0    2.6  2  AAA_28           AAA domain
    0.00017   21.4   0.0        0.2   11.4   0.0    2.4  2  IstB_IS21        IstB-like ATP binding protein
    0.00022   21.8   0.0       0.07   13.6   0.0    2.8  2  ABC_tran         ABC transporter
    0.00022   21.2   0.0       0.29   11.2   0.0    3.0  2  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
    0.00023   21.0   0.0       0.47   10.3   0.0    2.8  2  AAA_3            ATPase family associated with various cellul
    0.00023   21.2   0.0       0.84    9.5   0.0    3.6  4  ATPase_2         ATPase domain predominantly from Archaea
    0.00026   20.8   0.0      0.025   14.3   0.0    2.3  2  AAA_24           AAA domain
    0.00038   21.0   0.0      0.053   14.1   0.0    2.7  2  AAA_18           AAA domain
    0.00062   19.3   0.0       0.38   10.2   0.0    2.8  2  AAA_7            P-loop containing dynein motor region
     0.0018   17.6   0.0       0.85    8.9   0.0    2.5  2  Zeta_toxin       Zeta toxin
     0.0027   17.5   0.7      0.018   14.8   0.0    2.7  2  AAA_30           AAA domain
     0.0052   16.6   0.0        0.5   10.1   0.0    2.5  2  AAA_11           AAA domain
     0.0059   17.0   1.9      0.072   13.4   0.1    2.8  3  AAA_19           AAA domain
     0.0078   16.1   0.0      0.048   13.5   0.0    2.2  2  Bac_DnaA         Bacterial dnaA  protein
  ------ inclusion threshold ------
      0.013   15.4   1.0        0.2   11.5   0.0    3.1  2  NACHT            NACHT domain
      0.018   15.5   0.1        7.8    6.9   0.0    3.0  2  AAA_17           AAA domain
      0.027   13.6   0.1        0.3   10.2   0.0    2.1  2  Parvo_NS1        Parvovirus non-structural protein NS1
      0.032   13.6   0.0        0.6    9.5   0.0    2.7  3  TniB             Bacterial TniB protein
       0.05   13.3   0.0        7.6    6.2   0.0    3.5  3  Sigma54_activat  Sigma-54 interaction domain
      0.067   13.7   0.0       0.27   11.7   0.0    2.0  2  AAA_23           AAA domain
       0.14   12.0   0.0        1.9    8.3   0.0    2.5  2  AAA_29           P-loop containing region of AAA domain
       0.19   11.0   0.1         16    4.7   0.0    2.9  3  ATPase           KaiC
       0.23   11.3   0.6          2    8.3   0.0    2.9  3  NTPase_1         NTPase


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.8   0.0   1.9e-45   9.1e-43       1     131 [.     284     413 ..     284     414 .. 0.98
   2 !  152.9   0.0   1.3e-47   6.2e-45       1     131 [.     556     683 ..     556     684 .. 0.97

  Alignments for each domain:
  == domain 1  score: 145.8 bits;  conditional E-value: 1.9e-45
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTS CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkk 99 
                 +llyGppGtGKT++ +a+a e+++++++i+g++++ ky+ge+e++++++f++a++++ psi+fiDE+da+a++r+++ se e+r+v+ Llt ldg+++ 
  EPX71367.1 284 ILLYGPPGTGKTMILRAIAAETKAHVFRIDGPSVVGKYMGETEARLKKIFDDARSQQ-PSIIFIDEVDAIAPKRTSDISEAESRAVASLLTLLDGMSSA 381
                 69******************************************************9.****************999*********************6 PP

                 SSTEEEEEEESSGGGSTHHHHS.TTSSEEEETT CS
         AAA 100 eskvivigatnrpdkldpallr.gRfdrkieie 131
                  +kv v +atnrp+++d+al+r gR++++ie++
  EPX71367.1 382 -GKVAVFAATNRPNSIDEALRRpGRLEKEIEVG 413
                 .77***************************986 PP

  == domain 2  score: 152.9 bits;  conditional E-value: 1.3e-47
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTS CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkk 99 
                 +llyGppG+ KTl+aka+a+e+g +f++++g+el++ky+gese+ +r+lf++a++ + ps++f+DEidal++sr  +e+ +++rvv +Ll+e+dg +  
  EPX71367.1 556 ILLYGPPGCSKTLTAKAIATETGLNFISVKGPELFNKYIGESERAVRQLFQKARQAS-PSVIFFDEIDALTGSR--GEDHSGDRVVTALLNEMDGIEAL 651
                 69******************************************************9.****************..9999******************8 PP

                 SSTEEEEEEESSGGGSTHHHHS.TTSSEEEETT CS
         AAA 100 eskvivigatnrpdkldpallr.gRfdrkieie 131
                 ++ v+v++atnrpd +dpal+r gR+dr ++++
  EPX71367.1 652 KN-VLVLAATNRPDVIDPALMRpGRLDRLFYVG 683
                 55.*************************99986 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.8   0.5   1.3e-12     6e-10       5      36 ..     441     472 ..     438     481 .. 0.92
   2 !   56.4   0.5   4.1e-18   1.9e-15       2      45 .]     707     752 ..     706     752 .. 0.95

  Alignments for each domain:
  == domain 1  score: 38.8 bits;  conditional E-value: 1.3e-12
   AAA_lid_3   5 keLAerTeGySGADlaalcreAallAlrrgik 36 
                 ++LA rT+ y+GADl a++reAal+A++r++k
  EPX71367.1 441 EDLAGRTHAYVGADLTAVVREAALRAIKRTLK 472
                 79***************************987 PP

  == domain 2  score: 56.4 bits;  conditional E-value: 4.1e-18
   AAA_lid_3   2 vdlkeLAerTeGySGADlaalcreAallAlrrgik..eitmedfee 45 
                 vdl+++A rT+G+SGA+++alc+ A+l+A+ ++ +  eit+++fe+
  EPX71367.1 707 VDLEDIALRTDGCSGAEIVALCQDAGLVAMHENVEatEITQAHFEK 752
                 9********************************99755******96 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.0   2.5e-07   0.00012      36      98 ..     284     354 ..     279     366 .. 0.77
   2 !   20.2   0.0   8.3e-07   0.00039      11      96 ..     523     624 ..     515     631 .. 0.65
   3 ?   -0.4   0.0       1.8   8.6e+02      22      45 ..     665     688 ..     642     704 .. 0.79

  Alignments for each domain:
  == domain 1  score: 21.9 bits;  conditional E-value: 2.5e-07
      RuvB_N  36 vllyGpPGlGkttlakiiakelgvklkitsgPvl..ekagdlaalltnl......eekdvlfideihrlsr 98 
                 +llyGpPG Gkt + + ia+e ++++    gP +  +  g+  a l+++      ++  ++fide+  +++
  EPX71367.1 284 ILLYGPPGTGKTMILRAIAAETKAHVFRIDGPSVvgKYMGETEARLKKIfddarsQQPSIIFIDEVDAIAP 354
                 8*************************999999874423466666555543322334567******988765 PP

  == domain 2  score: 20.2 bits;  conditional E-value: 8.3e-07
      RuvB_N  11 gqekvkeklkifie........aakkreealdhvllyGpPGlGkttlakiiakelgvklkitsgPvl......ekagdlaalltnleek..dvlfidei 93 
                 gqe+vk+klk  +e         a+   ++   +llyGpPG  kt  ak ia+e g ++ +  gP l      e ++ +  l+++ ++    v+f dei
  EPX71367.1 523 GQEDVKQKLKESVEwplthpktFARLGVRPPKGILLYGPPGCSKTLTAKAIATETGLNFISVKGPELfnkyigESERAVRQLFQKARQAspSVIFFDEI 621
                 6666666666555422111111244445567789*******************************8843322333445555655554432268888888 PP

      RuvB_N  94 hrl 96 
                   l
  EPX71367.1 622 DAL 624
                 776 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 1.8
      RuvB_N  22 fieaakkreealdhvllyGpPGlG 45 
                 +i+ a +r   ld ++ +GpP l 
  EPX71367.1 665 VIDPALMRPGRLDRLFYVGPPNLE 688
                 477788899999999999999885 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   8.9e-07   0.00042      24      51 ..     272     308 ..     251     320 .. 0.66
   2 ?    6.7   0.0     0.019       8.8     122     163 ..     328     379 ..     323     387 .. 0.67
   3 !   14.5   0.1   7.6e-05     0.036      24     136 ..     553     663 ..     545     666 .. 0.68

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 8.9e-07
      AAA_16  24 p.........elvllsGesGvGKsslvrellralekd 51 
                           + +ll+G++G+GK+ ++r+++ + +++
  EPX71367.1 272 LfeyfhisppRGILLYGPPGTGKTMILRAIAAETKAH 308
                 25555555569*******************9544333 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.019
      AAA_16 122 llkrllallsrderplvlvlDdlq...........wadeaslqllaaLlrlle 163
                  lk++++ +++ ++p ++++D+++            a++   + l +Ll+ ++
  EPX71367.1 328 RLKKIFDDARS-QQPSIIFIDEVDaiapkrtsdisEAESRAVASLLTLLDGMS 379
                 68999999999.999*********77777777444333344444444444444 PP

  == domain 3  score: 14.5 bits;  conditional E-value: 7.6e-05
      AAA_16  24 pelvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipysa.laqalareellrqlldeaes.aeleawrekleealaavpelagaea.... 116
                 p  +ll+G++G+ K+  +++++++       f++ k  +l     y+         e+ +rql ++a++ +    + +++++ +++ +e+++ ++    
  EPX71367.1 553 PKGILLYGPPGCSKTLTAKAIATETG---LNFISVKGPEL--FNKYIGeS------ERAVRQLFQKARQaSPSVIFFDEIDALTGSRGEDHSGDRvvta 640
                 3889******************7555...559****9999..33343322......2445555555433034455555566666666666666667777 PP

      AAA_16 117 ....srllellkrllallsrderp 136
                      +  e+lk+ l+l+++  rp
  EPX71367.1 641 llneMDGIEALKNVLVLAAT-NRP 663
                 78888888888888888888.555 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.0   7.3e-07   0.00034       6     105 ..     284     377 ..     280     383 .. 0.74
   2 !   21.3   0.0   4.9e-07   0.00023       6     105 ..     556     647 ..     551     653 .. 0.79

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 7.3e-07
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTSEEEEETGGG-------------HH..HHHHHHHH CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegGivllDEidKihpkessgadvSreg..VqrdLLqi 102
                 ill gp g+Gkt++ +a+a   ++    ++ r+d  ++    +     +  + +   + + ++  i+++DE+d i+p  + ++d+S+ +   +  LL +
  EPX71367.1 284 ILLYGPPGTGKTMILRAIAAETKA----HVFRIDGPSVVG--KYMGETEARLKKIFDDARSQQPSIIFIDEVDAIAP--KRTSDISEAEsrAVASLLTL 374
                 7999**********9999999985....9*****999998..22222222223333456678888************..78888886542245567777 PP

                 HH- CS
       AAA_2 103 leg 105
                 l+g
  EPX71367.1 375 LDG 377
                 776 PP

  == domain 2  score: 21.3 bits;  conditional E-value: 4.9e-07
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTS..EEEEETGGG-------------HHHHHHHHHH CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG..ivllDEidKihpkessgadvSregVqrdLLqi 102
                 ill gp g+ kt++aka+a    +    ++i +   el      + + +++   ++  ++a +    ++++DEid  +   s g+d S++ V+++LL+ 
  EPX71367.1 556 ILLYGPPGCSKTLTAKAIATETGL----NFISVKGPELFN----KYIGESERAVRQLFQKARQASpsVIFFDEIDALTG--SRGEDHSGDRVVTALLNE 644
                 8999****************9998....999999999999....33333333333333333333366********9999..****************98 PP

                 HH- CS
       AAA_2 103 leg 105
                 ++g
  EPX71367.1 645 MDG 647
                 887 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.0     1e-07   4.9e-05       2     135 ..     284     401 ..     283     402 .. 0.77
   2 !   12.2   0.0   0.00029      0.14       2      76 ..     556     623 ..     555     672 .. 0.83

  Alignments for each domain:
  == domain 1  score: 23.4 bits;  conditional E-value: 1e-07
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------..G-SEEEEESGGG--HHHHHHHHHHHHSSEEE..- CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar..egeilvlDEveraesevlnsLlslleerrlllee 98 
                 +lL GppGtgK+++ + +aa +++ v+ + +++      ++g++    g+t+ + +++ + ar  +++i+++DEv+ + ++ ++      ++   +l  
  EPX71367.1 284 ILLYGPPGTGKTMILRAIAAETKAHVFRIDGPS------VVGKYM---GETEARLKKIFDDARsqQPSIIFIDEVDAIAPKRTSDISEAESRAVASLLT 373
                 89*****************************99......999998...888888899999999899**********88877666555544444444444 PP

                 SSSEEE---......-EEEEEESS--.-TT-TTHHHH CS
       AAA_5  99 ggelvkaknddllerfrviatanpldrslnelspalr 135
                 +   ++ + +     + v+a++n+++    ++++alr
  EPX71367.1 374 LLDGMSSAGK-----VAVFAATNRPN----SIDEALR 401
                 4444444443.....77777777777....6666666 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 0.00029
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------..G-SEEEEESGGG CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar..egeilvlDEver 76 
                 +lL GppG+ K+  a+ +a  ++ ++  v +++      l+ ++    g+ ++    l ++ar  +++++++DE++ 
  EPX71367.1 556 ILLYGPPGCSKTLTAKAIATETGLNFISVKGPE------LFNKYI---GESERAVRQLFQKARqaSPSVIFFDEIDA 623
                 89*******************999999999887......777777...55555556666677768889999999985 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.1   1.2e-05    0.0056       8      49 ..     284     316 ..     279     391 .. 0.82
   2 !    8.1   0.2    0.0066       3.1       8      67 ..     556     628 ..     550     658 .. 0.52

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 1.2e-05
      AAA_22   8 lvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlps 49 
                 ++++G++GtGKT+ lr ++ +          +++v++++ ps
  EPX71367.1 284 ILLYGPPGTGKTMILRAIAAET---------KAHVFRIDGPS 316
                 89******************99.........55555555554 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.0066
      AAA_22   8 lvvtGesGtGKTtllrrlleqldeeakaee.................erpevvfvtlpsstsskdllrellralgle 67 
                 ++++G++G+ KT++++ ++ +                          + ++++f ++ + + s  ++ e+   +g++
  EPX71367.1 556 ILLYGPPGCSKTLTAKAIATETGLN----FisvkgpelfnkyigeseRAVRQLFQKARQASPSVIFFDEIDALTGSR 628
                 6788888888888888888776322....122324444444444333333333333333333333344444444444 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   1.3e-06    0.0006       2      82 ..     284     394 ..     284     484 .. 0.79
   2 ?   -0.2   0.0       2.2     1e+03     100     124 ..     456     480 ..     424     520 .. 0.65
   3 !    7.7   0.0    0.0081       3.8       2      43 ..     556     599 ..     556     632 .. 0.80

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 1.3e-06
      AAA_33   2 vllvGlpGsGKstlaerllkklg..avllssdtlrrrlfgtdqqskt............................dytrvldrlyqilnelarkalsag 70 
                 +ll G+pG+GK+  ++ ++++++  +++++ +++  ++ g+ + +++                            d +++++r+ + l  l++ + sag
  EPX71367.1 284 ILLYGPPGTGKTMILRAIAAETKahVFRIDGPSVVGKYMGETEARLKkifddarsqqpsiifidevdaiapkrtsDISEAESRAVASLLTLLDGMSSAG 382
                 6789***************99999999999999777777644444444555555555677777777777777777888899999999*9********** PP

      AAA_33  71 rnvildatnlsr 82 
                 + +++ atn+ +
  EPX71367.1 383 KVAVFAATNRPN 394
                 ********8754 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 2.2
      AAA_33 100 rivvvetdeetlkeRlakRaangdd 124
                 ++vv e+  + +k+ l+ R+++gd+
  EPX71367.1 456 TAVVREAALRAIKRTLKNRSEAGDT 480
                 4444444444444444444444443 PP

  == domain 3  score: 7.7 bits;  conditional E-value: 0.0081
      AAA_33   2 vllvGlpGsGKstlaerllkklg..avllssdtlrrrlfgtdqq 43 
                 +ll G+pG+ K+  a+ ++ ++g  ++ +  ++l++++ g+ ++
  EPX71367.1 556 ILLYGPPGCSKTLTAKAIATETGlnFISVKGPELFNKYIGESER 599
                 6789*******************988889999988877774333 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   2.5e-05     0.012       5      76 ..     284     352 ..     281     389 .. 0.79
   2 !    9.3   0.0    0.0024       1.1       5      76 ..     556     624 ..     553     652 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 2.5e-05
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpe.kllelileklkeekktylflDEiqev 76 
                 +++ G+  +GKT++l+ ++ e      +++ i+  +   k + ++e +l +++ +  ++++ +++f+DE+  +
  EPX71367.1 284 ILLYGPPGTGKTMILRAIAAETK---AHVFRIDGPSVVGKYMGETEaRLKKIFDDA-RSQQPSIIFIDEVDAI 352
                 6899***************9988...999999988877766666552455555554.44599********876 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.0024
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelileklkeekktylflDEiqev 76 
                 +++ G+  + KT  +k ++ e      +++ ++  +  +k + ++e+  + +++k+++   +++f+DEi  +
  EPX71367.1 556 ILLYGPPGCSKTLTAKAIATETG---LNFISVKGPELFNKYIGESERAVRQLFQKARQASPSVIFFDEIDAL 624
                 7899999********99998887...555555555544455555555555555554455899*******876 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.0   0.00062      0.29      51      98 ..     282     327 ..     276     352 .. 0.82
   2 !   12.9   0.0   9.9e-05     0.047      51     106 ..     554     608 ..     549     611 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00062
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  51 ravLlaGpsgtGktalaiaiskelgedvpfvalsgsevyslevkktev 98 
                 r++Ll Gp+gtGkt +  ai+ e     +   + g  v    +  te+
  EPX71367.1 282 RGILLYGPPGTGKTMILRAIAAETK--AHVFRIDGPSVVGKYMGETEA 327
                 89*******************9965..444566666666666666665 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 9.9e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXX CS
       TIP49  51 ravLlaGpsgtGktalaiaiskelgedvpfvalsgsevyslevkkte.vltqalrks 106
                 +++Ll Gp+g  kt  a ai+ e g  + f++++g e++   +  +e ++ q ++k+
  EPX71367.1 554 KGILLYGPPGCSKTLTAKAIATETG--LNFISVKGPELFNKYIGESErAVRQLFQKA 608
                 89*********************98..99************9999884455666665 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0      0.04        19      48      71 ..     284     307 ..     274     318 .. 0.81
   2 ?   -2.3   0.0       7.4   3.5e+03     119     141 ..     326     349 ..     319     359 .. 0.76
   3 !   17.4   0.0   6.9e-06    0.0033      40     112 ..     548     621 ..     527     645 .. 0.74

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.04
       Rad17  48 LLisGPsGCgkstvvkvLskelgi 71 
                 +L+ GP+G gk+ +++ ++ e   
  EPX71367.1 284 ILLYGPPGTGKTMILRAIAAETKA 307
                 6899***********999877654 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 7.4
       Rad17 119 ylklqklGddlrtdk.klilvedl 141
                   +l+k  dd+r+++ ++i+++++
  EPX71367.1 326 EARLKKIFDDARSQQpSIIFIDEV 349
                 456778889998865489999997 PP

  == domain 3  score: 17.4 bits;  conditional E-value: 6.9e-06
       Rad17  40 LesrkkriLLisGPsGCgkstvvkvLskelgiklrewlnpvslkepdn.qksdfkgltekesrflsqiesfkel 112
                 L  r+ + +L+ GP+GC+k+ + k ++ e g +++    p ++++     +  ++ l++k  +  + +  f e+
  EPX71367.1 548 LGVRPPKGILLYGPPGCSKTLTAKAIATETGLNFISVKGPELFNKYIGeSERAVRQLFQKARQASPSVIFFDEI 621
                 445566667889***********************999999987654337777888888888777888888777 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.0   0.00071      0.33      36      56 ..     284     304 ..     241     318 .. 0.84
   2 ?    0.1   0.0       1.1   5.1e+02     129     183 ..     328     386 ..     307     390 .. 0.71
   3 ?    3.3   0.1      0.11        52      36      54 ..     556     574 ..     529     589 .. 0.80
   4 !    9.3   0.0    0.0017      0.79     127     185 ..     598     658 ..     578     660 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00071
      AAA_25  36 allaGapgtGKttlaldlala 56 
                 +ll+G+pgtGKt+++  +a++
  EPX71367.1 284 ILLYGPPGTGKTMILRAIAAE 304
                 79************9888876 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 1.1
      AAA_25 129 dvdaleaaieevegvrlvviDplsralgg.....densnsdvgalvealeriarrtgaav 183
                  ++++ +++++  ++  + iD ++++ +      +e ++++v++l++ l+ ++ + ++av
  EPX71367.1 328 RLKKIFDDARS-QQPSIIFIDEVDAIAPKrtsdiSEAESRAVASLLTLLDGMSSAGKVAV 386
                 45667777777.779999999999988886544455555556666666666666666666 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.11
      AAA_25  36 allaGapgtGKttlaldla 54 
                 +ll+G+pg+ Kt  a  +a
  EPX71367.1 556 ILLYGPPGCSKTLTAKAIA 574
                 79**********9886665 PP

  == domain 4  score: 9.3 bits;  conditional E-value: 0.0017
      AAA_25 127 tadvdaleaaieevegvrlvviDplsralgg.densnsd..vgalvealeriarrtgaavll 185
                 +++v++l +++++ + + ++ +D +++++g  +e+ + d  v+al++ ++ i++ +++ vl+
  EPX71367.1 598 ERAVRQLFQKARQ-ASPSVIFFDEIDALTGSrGEDHSGDrvVTALLNEMDGIEALKNVLVLA 658
                 57899********.78***************75555555546**********9999988876 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   2.8e-05     0.013      46     159 ..     274     400 ..     227     414 .. 0.62
   2 !    7.2   0.0    0.0055       2.6      21     155 ..     512     666 ..     495     672 .. 0.58

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 2.8e-05
      DUF815  46 qfleglpannvLLwGarGtGKSslvkallneyaeegLrl..ievekedl....kelpklvellrerperfilfvDDL.......sF...eeeeeeyksL 128
                 ++ +  p + +LL+G  GtGK  +++a+ +e++++  r+    v  + +    + l+k+++  r +++  i+f+D +       +    e+e ++  sL
  EPX71367.1 274 EYFHISPPRGILLYGPPGTGKTMILRAIAAETKAHVFRIdgPSVVGKYMgeteARLKKIFDDAR-SQQPSIIFIDEVdaiapkrTSdisEAESRAVASL 371
                 4566778899*************************98873323444444111145666666655.4566799999763222222111113333344677 PP

      DUF815 129 ksvLeGsleakpenvliyaTsNrRhLlpekl 159
                  ++L+G   +++ +v ++a +Nr + + e l
  EPX71367.1 372 LTLLDGM--SSAGKVAVFAATNRPNSIDEAL 400
                 7788885..4567788888888887777765 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0055
      DUF815  21 evdevklddLvgidkqkealvente.......qfle..glpannvLLwGarGtGKSslvkallneyaeegLrlievekedl.....kelpklvellr.. 103
                 e  +vk++++ g ++ k++l+e +e       +f++   +p + +LL+G  G+ K  + ka+ +e+   gL +i v+  +l      e ++ v++l   
  EPX71367.1 512 ESPNVKWSQIGGQEDVKQKLKESVEwplthpkTFARlgVRPPKGILLYGPPGCSKTLTAKAIATET---GLNFISVKGPELfnkyiGESERAVRQLFqk 607
                 55567777777777777777776542221121333321468899******************9875...566665555444221115555555544312 PP

      DUF815 104 .erperfilf...vDDLsFeeeeeey..ksLksvLeG..sleakpenvliyaTsNrRhLl 155
                  +++   ++f   +D L+  ++e++   + + ++L+   ++ ++ +nvl+ a +Nr +++
  EPX71367.1 608 aRQASPSVIFfdeIDALTGSRGEDHSgdRVVTALLNEmdGI-EALKNVLVLAATNRPDVI 666
                 12223356661333445555555444446666666431134.445788888888887766 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   0.0   0.00028      0.13       1      27 [.     284     316 ..     284     379 .. 0.66
   2 !    9.1   0.0    0.0035       1.6       1      23 [.     556     578 ..     556     625 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00028
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkkl......k 27 
                   i+lyGp+g+GK+++ + +a++   ++       
    EPX71367.1 284 ILLYGPPGTGKTMILRAIAAETKAHVfridgpS 316
                   789****************99998885553331 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0035
  RNA_helicase   1 iwlyGpsgeGKStlakeLakall 23 
                   i+lyGp+g+ K+++ak +a++  
    EPX71367.1 556 ILLYGPPGCSKTLTAKAIATETG 578
                   789**************887755 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.1   0.00019     0.088      25      43 ..     284     302 ..     280     308 .. 0.89
   2 !    7.8   0.0    0.0042         2      25      43 ..     556     574 ..     544     577 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00019
  Mg_chelatase  25 lllvGppGsGKtmlakrlp 43 
                   +ll+GppG+GKtm+ ++++
    EPX71367.1 284 ILLYGPPGTGKTMILRAIA 302
                   89************98875 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0042
  Mg_chelatase  25 lllvGppGsGKtmlakrlp 43 
                   +ll+GppG+ Kt+ ak+++
    EPX71367.1 556 ILLYGPPGCSKTLTAKAIA 574
                   89*************9986 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.0   0.00011     0.053       2      36 ..     284     327 ..     283     406 .. 0.57
   2 ?    6.4   0.0      0.02       9.5       2      39 ..     556     598 ..     555     621 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 0.00011
      AAA_28   2 ivitGgestGKTtlleaLaar.........gypvvpEaareile 36 
                 i + G+++tGKT +l+a+aa+         g +vv  ++ e   
  EPX71367.1 284 ILLYGPPGTGKTMILRAIAAEtkahvfridGPSVVGKYMGETEA 327
                 7899***************6544445555555555444444433 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.02
      AAA_28   2 ivitGgestGKTtlleaLaar...gypvv..pEaareileekl 39 
                 i + G++++ KT +++a+a +   ++  v  pE + +++ e  
  EPX71367.1 556 ILLYGPPGCSKTLTAKAIATEtglNFISVkgPELFNKYIGESE 598
                 7899***************655443333358888888886655 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.0   0.00042       0.2      43      73 ..     277     307 ..     253     348 .. 0.85
   2 !    7.4   0.0    0.0071       3.4      48      90 ..     554     593 ..     549     643 .. 0.63

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00042
   IstB_IS21  43 fiekkenivllGpsGvGKshlaialgveavr 73 
                 +i+   +i+l Gp+G+GK+ +  a++ e+ +
  EPX71367.1 277 HISPPRGILLYGPPGTGKTMILRAIAAETKA 307
                 56667889**************999987655 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0071
   IstB_IS21  48 enivllGpsGvGKshlaialgveavraglsvlfvrvedLveel 90 
                 ++i+l Gp+G  K+  a a+++e   +gl+ + v+ ++L+++ 
  EPX71367.1 554 KGILLYGPPGCSKTLTAKAIATE---TGLNFISVKGPELFNKY 593
                 6799***************9875...45555555666777664 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.0   0.00015      0.07       7      73 ..     277     342 ..     275     408 .. 0.72
   2 ?    5.0   0.0     0.069        32       7      80 ..     549     632 ..     546     661 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 0.00015
                 EEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS.--S-TT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxx RF
    ABC_tran   7 klkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqe.pqlfpe 73 
                 ++++ + + + G+ G+GK+ +l+++a ++k    +i  dg ++  + + +++++++ ++ +  + +p 
  EPX71367.1 277 HISPPRGILLYGPPGTGKTMILRAIAAETKAHVFRI--DGPSVVGKYMGETEARLKKIFDDaRSQQPS 342
                 6677777899******************99765555..777777777777777777777774334444 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.069
                 EEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS.--S-TTSBHHHH...........H CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxx...........x RF
    ABC_tran   7 klkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqe.pqlfpeltvren...........e 80 
                  +++ + + + G+ G+ K+  +k++a ++      i ++g +l ++ + ++++ ++ l+q+  q  p +   ++           +
  EPX71367.1 549 GVRPPKGILLYGPPGCSKTLTAKAIATETGL--NFISVKGPELFNKYIGESERAVRQLFQKaRQASPSVIFFDEidaltgsrgedH 632
                 5667777899****************99865..66777888888888888888888888886566666655555566666555552 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0   0.00061      0.29      21      52 ..     283     316 ..     253     330 .. 0.81
   2 ?    6.5   0.0     0.017         8      19      59 ..     553     593 ..     522     604 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00061
                 EEEEEESTTSSHHHHHHHHHHHTT--..----TT CS
        TsaE  21 vilLeGdLGaGKTtlvrglakalgve..evkSPT 52 
                  ilL+G+ G+GKT++ r++a++ + +  ++  P+
  EPX71367.1 283 GILLYGPPGTGKTMILRAIAAETKAHvfRIDGPS 316
                 49*******************9988767787775 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.017
                 TEEEEEEESTTSSHHHHHHHHHHHTT--..----TTTTSEEEE CS
        TsaE  19 gdvilLeGdLGaGKTtlvrglakalgve..evkSPTFtlveeY 59 
                  + ilL+G+ G+ KT  ++++a + g++  +vk P   l+++Y
  EPX71367.1 553 PKGILLYGPPGCSKTLTAKAIATETGLNfiSVKGP--ELFNKY 593
                 3349***********************98889988..466666 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.0   0.00099      0.47       2      31 ..     284     313 ..     283     371 .. 0.73
   2 !    7.5   0.0    0.0072       3.4       2      30 ..     556     584 ..     555     621 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00099
       AAA_3   2 vllegvPGlaktllvkalakaldlefkriq 31 
                 +ll g PG++kt++ +a+a   ++++ ri 
  EPX71367.1 284 ILLYGPPGTGKTMILRAIAAETKAHVFRID 313
                 7999*********************99996 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0072
       AAA_3   2 vllegvPGlaktllvkalakaldlefkri 30 
                 +ll g PG +ktl++ka+a+  +l+f  +
  EPX71367.1 556 ILLYGPPGCSKTLTAKAIATETGLNFISV 584
                 7999******************9999766 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0    0.0018      0.84      18      46 ..     279     307 ..     271     333 .. 0.81
   2 ?    4.0   0.0     0.083        39     109     218 ..     332     442 ..     309     452 .. 0.76
   3 ?    1.2   0.0       0.6   2.8e+02      23      43 ..     556     576 ..     547     585 .. 0.82
   4 ?    1.0   0.0      0.72   3.4e+02      83     136 ..     578     628 ..     564     661 .. 0.59

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0018
    ATPase_2  18 epneiyfiYGpegsGKtaLlkeiienled 46 
                 +p + +++YGp g GKt +l+ i+ + + 
  EPX71367.1 279 SPPRGILLYGPPGTGKTMILRAIAAETKA 307
                 56666899***************998854 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.083
    ATPase_2 109 llekikkkgkk.iiiiiDelqklidlgln......gaellvkeLlnliesltkekhlcvviclsSeglfiervyneselegrhky.ilvddldketaln 199
                 ++++ + +  +  ii+iDe+  +     +       +   v++Ll+l++  +++  ++ v++++    +i+   +   + gr +  i+v   dk+  l+
  EPX71367.1 332 IFDDARSQ--QpSIIFIDEVDAIAPK--RtsdiseAESRAVASLLTLLDG-MSSAGKVAVFAATNRPNSID---EALRRPGRLEKeIEVGIPDKNARLD 422
                 44443333..247999****998732..1235554667789999999999.66777889999**9999999...55567788888899999999***** PP

    ATPase_2 200 flkegfkel.eelskedfee 218
                 +lk +f+ + ++ls e++e+
  EPX71367.1 423 ILKLLFEHVpNSLSPEEMED 442
                 *******9977778888886 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.6
    ATPase_2  23 yfiYGpegsGKtaLlkeiien 43 
                 +++YGp g+ Kt   k i+++
  EPX71367.1 556 ILLYGPPGCSKTLTAKAIATE 576
                 789*********988888765 PP

  == domain 4  score: 1.0 bits;  conditional E-value: 0.72
    ATPase_2  83 giavpkaeleeilkeksklvfkaielllekikkkgkk...iiiiiDelqklidlgln 136
                 g ++ ++++ e++++ + + ++a+ +l++k +    +    +i++De+  l   g++
  EPX71367.1 578 GLNFISVKGPELFNKYIGESERAVRQLFQKAR----QaspSVIFFDEIDALT--GSR 628
                 44444444455555555555555555555554....2444899****99998..766 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   5.2e-05     0.025       5      76 ..     284     351 ..     281     368 .. 0.61
   2 ?    3.9   0.0     0.081        38       5      76 ..     556     623 ..     553     628 .. 0.57

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 5.2e-05
      AAA_24   5 iliyGpsgiGKTtlakel..gpkplfidtek.GlksldadkfpdieswedfldevvelaaeladyktlviDtide 76 
                 il+yGp+g+GKT++++ +  + k+ ++ +++ ++    ++ +   e+ + +++ ++  + +++  ++++iD +d 
  EPX71367.1 284 ILLYGPPGTGKTMILRAIaaETKAHVFRIDGpSV---VGKYMG--ETEARLKKIFDDARSQQP--SIIFIDEVDA 351
                 89**************999877777776666222...222222..122333333333333333..5555555554 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.081
      AAA_24   5 iliyGpsgiGKTtlakelgpkplfidtekGlksldadkfpdie......swedfldevvelaaeladyktlviDtide 76 
                 il+yGp+g  KT +ak +        te Gl+ + ++  p++       s  ++++ ++  +a +a  +++++D id 
  EPX71367.1 556 ILLYGPPGCSKTLTAKAI-------ATETGLNFISVKG-PELFnkyigeSERAVRQLFQ--KARQASPSVIFFDEIDA 623
                 89*************998.......6666664443333.32223333333333333333..33344446666666665 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.0   0.00011     0.053       1      25 [.     284     326 ..     284     477 .. 0.72
   2 ?    4.3   0.0      0.12        56       1      31 [.     556     584 ..     556     651 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 0.00011
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf..................g 25 
                 Ill G+pG+GKt + ++++ +++                    
  EPX71367.1 284 ILLYGPPGTGKTMILRAIAAETKAhvfridgpsvvgkymgetE 326
                 99****************9987444566666666665566552 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.12
      AAA_18   1 IlltGtpGvGKttlakeLskrlgfgvnlrdv 31 
                 Ill G+pG+ Kt  ak+++ ++  g n ++v
  EPX71367.1 556 ILLYGPPGCSKTLTAKAIATET--GLNFISV 584
                 99****************9998..4444433 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.0   0.00081      0.38      33      58 ..     281     306 ..     272     314 .. 0.81
   2 ?    5.7   0.0      0.02       9.4      27      55 ..     547     575 ..     540     585 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00081
       AAA_7  33 kkpvllvGptGtGKtviikdllkkld 58 
                  + +ll+Gp GtGKt+i++ +  + +
  EPX71367.1 281 PRGILLYGPPGTGKTMILRAIAAETK 306
                 5679*************999777665 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.02
       AAA_7  27 elllknkkpvllvGptGtGKtviikdllk 55 
                 +l ++  k +ll+Gp G++Kt+++k + +
  EPX71367.1 547 RLGVRPPKGILLYGPPGCSKTLTAKAIAT 575
                 5556667899*************998655 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.0    0.0018      0.85      16      50 ..     281     313 ..     272     317 .. 0.86
   2 ?    6.0   0.0     0.014       6.4      15      51 ..     552     586 ..     543     613 .. 0.87

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0018
  Zeta_toxin  16 PklillgGqpGAGKselaellkdelerqgnvvrld 50 
                 P  ill G pG GK+ +++++++e+  +  v r+d
  EPX71367.1 281 PRGILLYGPPGTGKTMILRAIAAET--KAHVFRID 313
                 7889********************8..67777776 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.014
  Zeta_toxin  15 rPklillgGqpGAGKselaellkdelerqgnvvrldp 51 
                  Pk ill G pG+ K+ +a+++++e+  + n++ +++
  EPX71367.1 552 PPKGILLYGPPGCSKTLTAKAIATET--GLNFISVKG 586
                 6999*********************8..899988865 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   3.8e-05     0.018      11      49 ..     274     312 ..     268     373 .. 0.84
   2 ?   -1.1   0.2       2.8   1.3e+03      22      39 ..     557     574 ..     553     578 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 3.8e-05
      AAA_30  11 ealltsgdrvavltGpAGtGKttalkalreaweaaggrv 49 
                 e ++ s+ r  +l Gp+GtGKt++l+a+++  +a+ +r+
  EPX71367.1 274 EYFHISPPRGILLYGPPGTGKTMILRAIAAETKAHVFRI 312
                 55666666778899**************98877766555 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 2.8
      AAA_30  22 vltGpAGtGKttalkalr 39 
                 +l Gp+G  Kt + ka++
  EPX71367.1 557 LLYGPPGCSKTLTAKAIA 574
                 678**********99986 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.0     0.001       0.5      20      42 ..     284     306 ..     271     344 .. 0.78
   2 ?    3.7   0.0     0.093        44      20      39 ..     556     575 ..     531     615 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.001
      AAA_11  20 tliqGPPGtgKTktivellsqll 42 
                  l+ GPPGtgKT  + ++ ++  
  EPX71367.1 284 ILLYGPPGTGKTMILRAIAAETK 306
                 5899********99999888774 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.093
      AAA_11  20 tliqGPPGtgKTktivells 39 
                  l+ GPPG+ KT t  ++  
  EPX71367.1 556 ILLYGPPGCSKTLTAKAIAT 575
                 6899********88766655 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.1   0.00015     0.072      11      36 ..     282     307 ..     276     337 .. 0.87
   2 ?   -2.1   0.0       9.5   4.5e+03      97     115 ..     335     353 ..     320     365 .. 0.70
   3 ?    1.6   0.1      0.68   3.2e+02      11      31 ..     554     574 ..     547     583 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 0.00015
      AAA_19  11 kvllvtaGpGtGKTrvlkhivallve 36 
                 + +l+ ++pGtGKT +l++i a+ ++
  EPX71367.1 282 RGILLYGPPGTGKTMILRAIAAETKA 307
                 56899**************9988765 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 9.5
      AAA_19  97 ekklqeeellivDEfqdvd 115
                 +   q+  ++++DE+  + 
  EPX71367.1 335 DARSQQPSIIFIDEVDAIA 353
                 4444455699****98887 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.68
      AAA_19  11 kvllvtaGpGtGKTrvlkhiv 31 
                 k +l+ ++pG+ KT + k+i 
  EPX71367.1 554 KGILLYGPPGCSKTLTAKAIA 574
                 56899**********998876 PP

>> Bac_DnaA  Bacterial dnaA  protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.0    0.0001     0.048      37     199 ..     284     448 ..     280     469 .. 0.70
   2 ?   -1.6   0.0       4.2     2e+03      37      60 ..     556     579 ..     553     644 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 0.0001
                 EEEE-SSSSSHHHHHHHHHHHHHHHSSSS-EEEEEHHHHHHHHHHHHHTT-HHHHHHHHT.T-SEEEEE-GGGGTT-HHHH.........HHHHHHHHH CS
    Bac_DnaA  37 lfiygevGlGktHLlkaignevlenapelrvvYltaeeFlnelvkalrdkkaeefkeklr.kvDvLliDDiqflagkektq.........eelfhtfna 125
                 +++yg+ G Gkt +l+ai+ e++     ++v  + + + + + +   + + ++ f +    +  ++ iD++  +a k +++           l+++++ 
  EPX71367.1 284 ILLYGPPGTGKTMILRAIAAETK-----AHVFRIDGPSVVGKYMGETEARLKKIFDDARSqQPSIIFIDEVDAIAPKRTSDiseaesravASLLTLLDG 377
                 79****************98765.....55777777777777777777766666665443266788899998888886432211111111468899999 PP

                 HHTTT-EEEEEESS-TTT-SS--HHHHHHHHSSEEEE-----HHHHHHHHHHHHHHTT----TTHHHHHHHH-- CS
    Bac_DnaA 126 lleegkqvvlssDrsPkeleeledrlrsrfeaGlvvdieppdletrlailkkkieaeklevpeevlefiaervt 199
                 +  +gk  v+++   P++++e   r   r+e    +++  pd++ rl+ilk   e+    + +e +e +a r +
  EPX71367.1 378 MSSAGKVAVFAATNRPNSIDEALRR-PGRLEKE--IEVGIPDKNARLDILKLLFEHVPNSLSPEEMEDLAGRTH 448
                 99999***********987665433.4677765..556669999999999988876666666666666665554 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 4.2
                 EEEE-SSSSSHHHHHHHHHHHHHH CS
    Bac_DnaA  37 lfiygevGlGktHLlkaignevle 60 
                 +++yg+ G  kt   kai+ e+  
  EPX71367.1 556 ILLYGPPGCSKTLTAKAIATETGL 579
                 689999999999999999987654 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00043       0.2       3      25 ..     284     306 ..     282     311 .. 0.88
   2 ?    0.5   0.1       1.1     5e+02       3      23 ..     556     576 ..     554     579 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00043
                 EEEEC-TTTCHHHHHHHHHHHHC CS
       NACHT   3 vilqGeaGsGKTtLlqklalawa 25 
                 ++l G++G GKT+ l+ +a + +
  EPX71367.1 284 ILLYGPPGTGKTMILRAIAAETK 306
                 799***************98766 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 1.1
                 EEEEC-TTTCHHHHHHHHHHH CS
       NACHT   3 vilqGeaGsGKTtLlqklala 23 
                 ++l G++G+ KT  ++ +a++
  EPX71367.1 556 ILLYGPPGCSKTLTAKAIATE 576
                 7899*************9986 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.0     0.016       7.8       1      23 [.     287     309 ..     287     367 .. 0.87
   2 ?    5.2   0.0     0.056        26       1      26 [.     559     584 ..     559     615 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.016
                 EE-TTSSHHHHHHHHHHHHTEEE CS
      AAA_17   1 lGgPGsGKgtqceklvekygfth 23 
                 +G+PG GK+ +++ ++ + + ++
  EPX71367.1 287 YGPPGTGKTMILRAIAAETKAHV 309
                 79**********99999887665 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.056
                 EE-TTSSHHHHHHHHHHHHTEEEEEH CS
      AAA_17   1 lGgPGsGKgtqceklvekygfthlsa 26 
                 +G+PG+ K+  ++ ++ + g+ ++s 
  EPX71367.1 559 YGPPGCSKTLTAKAIATETGLNFISV 584
                 7*******************999986 PP

>> Parvo_NS1  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   0.00063       0.3     117     137 ..     284     304 ..     277     309 .. 0.87
   2 ?    0.8   0.0      0.43     2e+02     117     137 ..     556     576 ..     551     580 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00063
   Parvo_NS1 117 vwfyGpantGktnlaeaIaka 137
                 +++yGp+ tGkt++ +aIa  
  EPX71367.1 284 ILLYGPPGTGKTMILRAIAAE 304
                 89****************975 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.43
   Parvo_NS1 117 vwfyGpantGktnlaeaIaka 137
                 +++yGp+ + kt  a+aIa+ 
  EPX71367.1 556 ILLYGPPGCSKTLTAKAIATE 576
                 899***************975 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.0    0.0013       0.6      26      60 ..     272     306 ..     268     318 .. 0.82
   2 ?   -2.3   0.0       5.2   2.4e+03     116     132 ..     337     353 ..     320     363 .. 0.74
   3 ?    0.1   0.0      0.95   4.5e+02     108     152 ..     601     644 ..     589     647 .. 0.68

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0013
        TniB  26 LleypkrkrmpnlllvGdsnnGKtmivekFarlhp 60 
                 L+ey + + ++ +ll+G++ +GKtmi++  a++ +
  EPX71367.1 272 LFEYFHISPPRGILLYGPPGTGKTMILRAIAAETK 306
                 666777777899***************98876655 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 5.2
        TniB 116 relkvrvLiiDEihnll 132
                 r+ ++ ++ iDE++ + 
  EPX71367.1 337 RSQQPSIIFIDEVDAIA 353
                 677899999***99876 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.95
        TniB 108 eqqvlrllrelkvrvLiiDEihnllagsarkqreflnalksLgne 152
                  +q  +  r+ ++ v+ +DEi+ l  gs+ + +    ++  L ne
  EPX71367.1 601 VRQLFQKARQASPSVIFFDEIDALT-GSRGEDHSGDRVVTALLNE 644
                 3445555688999********9766.7766666555555555555 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0     0.016       7.6      24      47 ..     283     306 ..     273     314 .. 0.86
   2 ?   -1.8   0.0       4.7   2.2e+03      96     108 ..     343     355 ..     319     392 .. 0.67
   3 ?    2.3   0.0      0.26   1.2e+02      24      45 ..     555     576 ..     539     628 .. 0.73

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.016
                      -EEEECSTTSSHHHHHHHHHHHST CS
  Sigma54_activat  24 svlitGesGtGKellaraiheask 47 
                       +l+ G  GtGK+++ rai +++k
       EPX71367.1 283 GILLYGPPGTGKTMILRAIAAETK 306
                      68***************9987655 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 4.7
                      EEEEETGGGS-HH CS
  Sigma54_activat  96 tlfLDeigelple 108
                      ++f+De+  + ++
       EPX71367.1 343 IIFIDEVDAIAPK 355
                      6666666665544 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.26
                      -EEEECSTTSSHHHHHHHHHHH CS
  Sigma54_activat  24 svlitGesGtGKellaraihea 45 
                       +l+ G  G+ K+l a+ai ++
       EPX71367.1 555 GILLYGPPGCSKTLTAKAIATE 576
                      6788888888888888888654 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00057      0.27      10      40 ..     273     302 ..     264     349 .. 0.86
   2 ?   -2.1   0.0       9.8   4.6e+03      86     114 ..     435     491 ..     386     548 .. 0.57

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00057
      AAA_23  10 frdqeidFskgltlItGpNGaGKTTildAik 40 
                 f+ ++i   +g+ l++Gp G+GKT il+Ai 
  EPX71367.1 273 FEYFHISPPRGI-LLYGPPGTGKTMILRAIA 302
                 566777777777.9****************7 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 9.8
      AAA_23  86 y............................trsiererelskkkgkttkkaklellei 114
                                               r i+r+ +++++ g+t+ k++   +e 
  EPX71367.1 435 LspeemedlagrthayvgadltavvreaaLRAIKRTLKNRSEAGDTIIKENPGAVEL 491
                 344444444444455555555555555555666666666666666666665444444 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.0     0.004       1.9      21      43 ..     281     302 ..     269     304 .. 0.80
   2 ?   -0.1   0.0       1.7   7.8e+02      24      39 ..     372     387 ..     363     391 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.004
      AAA_29  21 lkgatlltGpsGsGKSTllDAiq 43 
                 ++g +ll Gp G+GK+ +l Ai+
  EPX71367.1 281 PRG-ILLYGPPGTGKTMILRAIA 302
                 345.9*************99987 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 1.7
      AAA_29  24 atlltGpsGsGKSTll 39 
                  tll G s +GK +++
  EPX71367.1 372 LTLLDGMSSAGKVAVF 387
                 6999********8776 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.035        16      20      35 ..     282     297 ..     249     308 .. 0.90
   2 ?   -2.8   0.0         7   3.3e+03     111     137 ..     332     358 ..     317     394 .. 0.55
   3 ?    2.8   0.0      0.13        63      20      38 ..     554     572 ..     544     585 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.035
      ATPase  20 rvvlitGepGtGKtif 35 
                 r +l++G pGtGKt++
  EPX71367.1 282 RGILLYGPPGTGKTMI 297
                 5699**********86 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 7
      ATPase 111 laeaikeikakrvviDsitglayeeke 137
                 + +  ++ + + + iD ++++a + ++
  EPX71367.1 332 IFDDARSQQPSIIFIDEVDAIAPKRTS 358
                 334445555677888888888433332 PP

  == domain 3  score: 2.8 bits;  conditional E-value: 0.13
      ATPase  20 rvvlitGepGtGKtifalq 38 
                 + +l++G pG+ Kt+ a+ 
  EPX71367.1 554 KGILLYGPPGCSKTLTAKA 572
                 6699***********9975 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.0    0.0043         2       2      32 ..     284     314 ..     283     330 .. 0.89
   2 ?   -1.5   0.0       4.3   2.1e+03      72     104 ..     319     349 ..     315     352 .. 0.62
   3 ?   -1.2   0.1       3.5   1.6e+03       2      23 ..     556     577 ..     555     588 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0043
                 EEEE--TTSSHHHHHHHHHHHH...GGGEEE CS
    NTPase_1   2 vfiTGppGvGKtTlvkkvlellkssgvkvgG 32 
                 +++ GppG+GKt +++ ++ + k + ++++G
  EPX71367.1 284 ILLYGPPGTGKTMILRAIAAETKAHVFRIDG 314
                 6788******************999999998 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 4.3
                 TTEEE-HHHHHHHHHHHHHHHH.HHH-EEEE--- CS
    NTPase_1  72 gkyvvdvesfeelalealrkal.seadviviDEi 104
                 gky+ ++e+      ++++ a  +++ +i iDE+
  EPX71367.1 319 GKYMGETEA---RLKKIFDDARsQQPSIIFIDEV 349
                 555555444...333444444437888******8 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 3.5
                 EEEE--TTSSHHHHHHHHHHHH CS
    NTPase_1   2 vfiTGppGvGKtTlvkkvlell 23 
                 +++ GppG  Kt   k ++ + 
  EPX71367.1 556 ILLYGPPGCSKTLTAKAIATET 577
                 6788*******98888777655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (783 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       570  (0.0317921); expected 358.6 (0.02)
Passed bias filter:                      529  (0.0295053); expected 358.6 (0.02)
Passed Vit filter:                        91  (0.00507558); expected 17.9 (0.001)
Passed Fwd filter:                        38  (0.00211947); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              38  [number of targets reported over threshold]
# CPU time: 0.83u 0.31s 00:00:01.13 Elapsed: 00:00:00.47
# Mc/sec: 4969.99
//
Query:       EPX71368.1  [L=96]
Description: hypothetical protein SOCG_01585 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       653  (0.0364214); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 715.51
//
Query:       EPX71369.1  [L=668]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.6e-16   57.8   0.5    0.00046   19.7   0.0    5.6  5  PUF       Pumilio-family RNA binding repeat
    1.7e-06   27.8   0.0    3.4e-06   26.8   0.0    1.5  1  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom


Domain annotation for each model (and alignments):
>> PUF  Pumilio-family RNA binding repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   5.1e-08   0.00046       2      32 ..     190     220 ..     189     223 .. 0.85
   2 !    9.1   0.0   0.00012       1.1      10      33 ..     234     257 ..     226     259 .. 0.83
   3 !    6.8   0.2   0.00065       5.8      12      23 ..     273     284 ..     272     291 .. 0.92
   4 !   13.3   0.0   5.6e-06      0.05       5      32 ..     301     329 ..     297     332 .. 0.86
   5 ?    1.5   0.0     0.031   2.8e+02       3      34 ..     337     368 ..     335     369 .. 0.82

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 5.1e-08
                 HGGGHHHHHTSTTHHHHHHHHHHHSCHHHHH CS
         PUF   2 ikgnlvqLstdqyGnyvvQkllehateeqkk 32 
                 +++ + +Ls+d  Gn v+Qk++e+++ + k+
  EPX71369.1 190 MLDDVAELSSDYLGNTVIQKFFEYCSDPVKE 220
                 6778889*****************9877665 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00012
                 HTSTTHHHHHHHHHHHSCHHHHHH CS
         PUF  10 stdqyGnyvvQkllehateeqkkl 33 
                  ++++G+++ Qk++++a+++ ++ 
  EPX71369.1 234 GIHKNGTWAAQKIIDVASTNLQME 257
                 58**************98877655 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.00065
                 STTHHHHHHHHH CS
         PUF  12 dqyGnyvvQkll 23 
                 dq+Gnyv Q++l
  EPX71369.1 273 DQFGNYVAQCCL 284
                 9**********9 PP

  == domain 4  score: 13.3 bits;  conditional E-value: 5.6e-06
                 GHHHHHTSTTHHHHHHHHHHH.SCHHHHH CS
         PUF   5 nlvqLstdqyGnyvvQklleh.ateeqkk 32 
                 +++++ + ++G+++++ +le  + +++++
  EPX71369.1 301 HCCEIGQSRFGARAIRACLENeHATFEQQ 329
                 99******************977766665 PP

  == domain 5  score: 1.5 bits;  conditional E-value: 0.031
                 GGGHHHHHTSTTHHHHHHHHHHHSCHHHHHHH CS
         PUF   3 kgnlvqLstdqyGnyvvQkllehateeqkkli 34 
                 + n + L+t+ +G  ++ +ll+ +  ++++++
  EPX71369.1 337 IINSHLLATNTNGMLLLTWLLDNSFFKNRHRL 368
                 667788****************9887777766 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.0   3.8e-10   3.4e-06       1      64 [.       2      60 ..       2      65 .. 0.93

  Alignments for each domain:
  == domain 1  score: 26.8 bits;  conditional E-value: 3.8e-10
                EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEE CS
       RRM_1  1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkkl 64
                l+V+ Lp  ++   +++lFs +G++k++ + +     +++ a+V +es  +A  A +al+++ +
  EPX71369.1  2 LYVSKLPVGTSSGAMHALFSSYGKVKDVWMLS-----PDNSAIVSYESLGSAIIARDALHNRSV 60
                8*******************************.....7**********************9655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (668 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       614  (0.0342462); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.39
# Mc/sec: 5190.23
//
Query:       EPX71370.1  [L=419]
Description: arginine specific carbamoyl-phosphate synthase subunit Arg5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.1e-46  157.5   0.0    4.3e-46  157.1   0.0    1.2  1  GATase           Glutamine amidotransferase class-I
    3.5e-45  153.0   0.0    5.6e-45  152.3   0.0    1.3  1  CPSase_sm_chain  Carbamoyl-phosphate synthase small chain, CP
     0.0004   20.2   2.5      0.073   12.8   0.4    3.0  2  Peptidase_C26    Peptidase C26
     0.0046   16.8   0.0     0.0079   16.0   0.0    1.3  1  DJ-1_PfpI        DJ-1/PfpI family


Domain annotation for each model (and alignments):
>> GATase  Glutamine amidotransferase class-I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.1   0.0   9.6e-50   4.3e-46       2     188 ..     232     407 ..     231     409 .. 0.97

  Alignments for each domain:
  == domain 1  score: 157.1 bits;  conditional E-value: 9.6e-50
                 EEESSTSTHHHHHHHHHHTT-EEEEEETTSHHHHHHHTHHSTSEEEEEEESSCTT.TTTHHHHHHHHCT.STS-EEEETHHHHHHHHHTTTEEEEEECE CS
      GATase   2 liDnydsvtenlvhalvelgvkvevvpidasaeeilellknpdgilvsgGpgspg.vegkieaikeare.nkiPiLGICLGmQllaiefgrkvvkekek 98 
                 +iD++  v+en++++lv++g++v+v+p+d+++++i   ++n+dg+++ +Gpg+p+  ++++++++++++  + Pi+GIC+G+Q+la++ g+k++k k +
  EPX71370.1 232 VIDCG--VKENILRSLVSRGASVTVFPFDYPIQNI---ASNYDGVFLTNGPGDPThLTKTVSNLRQLMDtYNGPIMGICMGHQVLALAAGAKTIKLK-Y 324
                 89***..****************************...68****************999999999999989**************************.* PP

                 EEEEEEEEEEETTTCGGTTTTSEEEEEEEEEEEEESGCHHHTTEEEEEEEETTEEEEEEEEETTTEEEESSBTTSTTSTTHHHHHHHHHH CS
      GATase  99 ehhggtmrlgddetallyglknevierhrHryevnpkelepaglevtakseddeelmeiiekknpfvgvQFHPEststpegpellfnfli 188
                 +++g++++  d        ++n++i++++H+y+v+  +++pa+++ t ++ +d+++++i + ++p+ +vQFHPE++ +p+++++lf++++
  EPX71370.1 325 GNRGHNIPAFD------IASGNCHITSQNHGYAVDI-ASLPAEWKSTWVNLNDQSNEGIAHTTRPISSVQFHPEARGGPMDTHYLFDNYM 407
                 ***********......77779*************9.99***********************************************9976 PP

>> CPSase_sm_chain  Carbamoyl-phosphate synthase small chain, CPSase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.3   0.0   1.2e-48   5.6e-45       2     128 .]      50     187 ..      49     187 .. 0.91

  Alignments for each domain:
  == domain 1  score: 152.3 bits;  conditional E-value: 1.2e-48
  CPSase_sm_chain   2 avLvLedGtvfeGksfg.akeavGEvvfnTgmtGYqeiltDpsYagqilvltypliGnyGv..........needvesekikvaglvvrelsee 84 
                      a+L++++G +f+G+sfg +++ +GE vf+T+ +GY e++tDpsY++qilv+t+pliGnyGv            +++es +i++ag+vv++++++
       EPX71370.1  50 ATLTIRNGPIFHGTSFGaNRNISGEAVFTTSPVGYVESMTDPSYKQQILVFTQPLIGNYGVpsgskrdehgLLRHFESPHIQCAGVVVNDYATK 143
                      6799*************66899***************************************8765554444334455599************** PP

  CPSase_sm_chain  85 psnwraeesLsewlkeekipgisgvDTRaLtkklrekgamkgvi 128
                      +s+w+a esL ew+++e++ +isgvDTRa+++ lre+g+ +++i
       EPX71370.1 144 YSHWTAVESLGEWCAREGVAAISGVDTRAIVTYLREQGSSLAKI 187
                      ***************************************99987 PP

>> Peptidase_C26  Peptidase C26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.4   1.6e-05     0.073     104     126 ..     297     319 ..     237     330 .. 0.88
   2 !    5.5   0.1    0.0028        13     174     216 .]     348     391 ..     332     391 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.6e-05
  Peptidase_C26 104 rgvPilgiCrGlqllnvalGGtl 126
                     + Pi+giC G+q+l+ a G ++
     EPX71370.1 297 YNGPIMGICMGHQVLALAAGAKT 319
                    467***************99765 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.0028
  Peptidase_C26 174 Hhqaike..laeelrveAvae.DgviEaieseeakafvlgvQwHPE 216
                    H  a++   l  e++ + v   D+  E i ++++  ++ +vQ+HPE
     EPX71370.1 348 HGYAVDIasLPAEWKSTWVNLnDQSNEGIAHTTR--PISSVQFHPE 391
                    5555543337788887777766999999999994..6********9 PP

>> DJ-1_PfpI  DJ-1/PfpI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   1.8e-06    0.0079      47     111 ..     254     315 ..     228     322 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.8e-06
                 EEE-SEEGGGCTCCG-SEEEE--BHHHHHHHHTSHHHHHHHHHHH.HTT-EEEEETTTHHHHHHTT CS
   DJ-1_PfpI  47 kvtvdaslddvkaaeyDalvlpGGragperlrenekvvelvkefa.ekgklvaaICagpqlLaaag 111
                  ++ d+ +++++++ yD + l  G   p++l +    v+ +++ + + ++++  IC+g q+La a 
  EPX71370.1 254 VFPFDYPIQNIASN-YDGVFLTNGPGDPTHLTK---TVSNLRQLMdTYNGPIMGICMGHQVLALAA 315
                 45679999998776.*********999999985...577777777589**************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (419 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       394  (0.0219756); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.29s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 2848.12
//
Query:       EPX71371.1  [L=338]
Description: dolichyl-phosphate beta-glucosyltransferase Alg5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.3e-28   97.2   0.0    1.3e-27   96.7   0.0    1.2  1  Glycos_transf_2  Glycosyl transferase family 2
    7.3e-05   22.8   0.0    0.00011   22.2   0.0    1.2  1  Glyco_tranf_2_3  Glycosyltransferase like family 2
     0.0031   17.0   0.0     0.0048   16.4   0.0    1.2  1  Glyco_tranf_2_2  Glycosyltransferase like family 2
  ------ inclusion threshold ------
       0.17   12.4   0.0       0.39   11.3   0.0    1.6  1  Glyco_tranf_2_4  Glycosyl transferase family 2


Domain annotation for each model (and alignments):
>> Glycos_transf_2  Glycosyl transferase family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.7   0.0   2.9e-31   1.3e-27       1     170 []      82     265 ..      82     265 .. 0.96

  Alignments for each domain:
  == domain 1  score: 96.7 bits;  conditional E-value: 2.9e-31
                      EEEEEESS-....TTTHHHHHHHHHHH......GGCCEEEEEEEEES-SSCHHHHHGGGCH...C-TTEEEEEESSS-HHHHHHHHHHHH--SS CS
  Glycos_transf_2   1 svviptyNe....ektlletlesllaq......dpypdfeiivvDDgStDetveileelak...edprvrvirreenvGkagalnaglraatgd 81 
                      +vvip+yNe     ++l+et++ l +         +  +e++v+DD StD+tv+ + +++     +++vrv+ +++n+Gk+ga+ +g+ +a+g+
       EPX71371.1  82 TVVIPAYNEsdriVDMLKETVDHLEKYyrtfgnRGKRLWEVLVIDDESTDSTVDSVLRFSGsldLGDHVRVCSLKKNRGKGGAVTWGMLHARGQ 175
                      69*******888888888999988888******************************************************************* PP

                      EEEEEESSEEE-TTHHHHHHHHHHH.TTCEEEEEEEEEECCCCCCCHC-SS.EEEECCHCCCCHCCCCCCSTTCSTCCCEEEEHHHHHCH CS
  Glycos_transf_2  82 yilflDaDdepdpdwleklvealekdgadvvlgqrprifgetdeiernkrv.generlyfkerkrslkgnlsfeigsaallrrealeell 170
                      y +f DaD + +  ++e l e + k+  ++v+ + +++ ++t    +++++ ++  + ++k  +    +++ +  +++ l++r a+++++
       EPX71371.1 176 YAIFADADGASKFSDIELLFESMPKNAIGGVVIGSRAHMVNTEAVVKRSFIrNFLMHSFHKLLQILGVREIGDTQCGFKLFSRFAYQNIF 265
                      ************************************************99999999999999999999****************998775 PP

>> Glyco_tranf_2_3  Glycosyltransferase like family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.0   2.5e-08   0.00011       3      97 ..      80     183 ..      77     197 .. 0.82

  Alignments for each domain:
  == domain 1  score: 22.2 bits;  conditional E-value: 2.5e-08
  Glyco_tranf_2_3   3 dlavlVptfneedvlgevlesllaq.e.y.....pr....vevvvvvdesdaetlevaeelaaalp..dvrvrvvvnarnlgstgksralneal 83 
                      +l+v++p++ne+d+++++l +++   e y      r     ev v++des+++t++ +  +   l+  d +vrv   ++n g++g+++    ++
       EPX71371.1  80 RLTVVIPAYNESDRIVDMLKETVDHlEkYyrtfgNRgkrlWEVLVIDDESTDSTVDSVLRFSGSLDlgD-HVRVCSLKKNRGKGGAVT---WGM 169
                      599**********8888888888443554467762255789***************9999999998845.99*999999877766665...888 PP

  Glyco_tranf_2_3  84 ravksdlvllvDdD 97 
                       ++++++ ++ D+D
       EPX71371.1 170 LHARGQYAIFADAD 183
                      88999999999998 PP

>> Glyco_tranf_2_2  Glycosyltransferase like family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   1.1e-06    0.0048       1      92 [.      82     184 ..      82     202 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 1.1e-06
  Glyco_tranf_2_2   1 svviplraseer..hyieervlqkakyy.......deeielivvddgSsekfleevssi...idlnllvylkdeddkayslaaarNrGaskaes 82 
                      +vvip +++ +r    ++e+v +  kyy           e++v+dd S++ +++ v  +    dl  +v +    +k  +++ a   G+ +a +
       EPX71371.1  82 TVVIPAYNESDRivDMLKETVDHLEKYYrtfgnrgKRLWEVLVIDDESTDSTVDSVLRFsgsLDLGDHVRVCSL-KKNRGKGGAVTWGMLHARG 174
                      79******9998334678888888899988887766778*************9998777222466667754444.5689*************** PP

  Glyco_tranf_2_2  83 dlvlFlDaDc 92 
                      ++ +F DaD 
       EPX71371.1 175 QYAIFADADG 184
                      ********96 PP

>> Glyco_tranf_2_4  Glycosyl transferase family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   8.6e-05      0.39      13      81 ..     108     183 ..      88     189 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 8.6e-05
  Glyco_tranf_2_4  13 hhlalg.....fdrilvydndstDgtrailkelpe.vkllhvd..ksyederrqvellka.llaryaeadwvlvvDaD 81 
                      +++++g       ++lv+d++stD t + + +    ++l +++  +s ++ r +  + ++ +l  +a++++ +++DaD
       EPX71371.1 108 YYRTFGnrgkrLWEVLVIDDESTDSTVDSVLRFSGsLDLGDHVrvCSLKKNRGKGGAVTWgML--HARGQYAIFADAD 183
                      4555555444445699**********9999986443665555523455666666666666355..4589999999999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       862  (0.0480785); expected 358.6 (0.02)
Passed bias filter:                      721  (0.0402142); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 2329.56
//
Query:       EPX71372.1  [L=484]
Description: homoserine O-acetyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.4e-51  173.3   0.0    2.6e-50  171.5   0.0    1.9  2  Abhydrolase_1  alpha/beta hydrolase fold
    5.9e-06   27.0   1.0    8.2e-06   26.6   1.0    1.2  1  Abhydrolase_6  Alpha/beta hydrolase family
  ------ inclusion threshold ------
      0.037   14.4   0.9      0.064   13.6   0.9    1.3  1  BES1_N         BES1/BZR1 plant transcription factor, N-termin
       0.14   11.4   0.0        1.4    8.2   0.0    2.2  2  Hydrolase_4    Serine aminopeptidase, S33


Domain annotation for each model (and alignments):
>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  171.5   0.0   5.7e-54   2.6e-50       2     256 ..      68     433 ..      67     434 .. 0.97
   2 ?   -3.9   0.0       1.9   8.4e+03     129     158 ..     438     467 ..     436     472 .. 0.81

  Alignments for each domain:
  == domain 1  score: 171.5 bits;  conditional E-value: 5.7e-54
                    EEEEE-STTTCGGG..GTTGHHHHHHHHT..TSEEEEEEETTSTTSSSTTTGB.........CHHSHHHHHHHHH..HH.HHHCTTSSEE.EEEET CS
  Abhydrolase_1   2 vlvilhGlpgssdv..waerglapaLakd..gfdvillDlrGvgySspapacin........ddygtasvaddld..ri.ldalgddklt.lvGhS 81 
                     l+++h+l gs+d   w+++ l+p+ a+d  +f++++l+++G++y+s++p + n        +++++ +v+dd+   ++ l++lg+++++  vG+S
     EPX71372.1  68 CLLLCHALSGSADAadWWGPMLGPGRAFDptHFFIVCLNSLGSPYGSASPVTWNsetksiygPEFPLTTVRDDVAlhKLvLQRLGVEQIAmAVGGS 163
                    59********999999***********************************999**********************9667**************** PP

                    HHHHHHHHHHHHHGGGEEEEEEESE....CSSCCHHHHHHHHHHHHHHCHHCHHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHH.......... CS
  Abhydrolase_1  82 mGGmialayaaeyperVkalvllga....idpaaslieaqrqqaksfpdffdgyaadcarnpagplladelaaleqrhrlvdalkf.......... 163
                    mGGm++l++a +  ++V+++v +++    +++++s++eaqrq+++s+p+f+dg++  + ++ +g+ +a+++a+l++r++++++  f          
     EPX71372.1 164 MGGMLVLEWAFD-TNYVRSIVPISTslrhSAWCISWSEAQRQSIYSDPKFNDGFYDMDDQPLSGLGAARMSALLTYRSKCSFERRFarkspdynrh 258
                    **********98.9**********************************************************************99********** PP

                    .............................................HCHHHCCHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHC........ CS
  Abhydrolase_1 164 .............................................pdkskrfpssgsdnasslatgalksieqwpttdsaklllrlre........ 206
                                                                   k+++ ps ++ + s + t++   + +++t++sa+++lr++         
     EPX71372.1 259 pypdrvptpmtpgdahwvvhnegngyrrerpsrsrdsspespasgSVKASSTPSLSQSTGSVSGTQSPSLRRPANTYFSAQSYLRYQAkkfvgrfd 354
                    ******************************************999889999999999*************************************** PP

                    ........................THHHHS....EEEEEEETTCSSSCHHHHHHHHHCHTS.EEEEEEETCSSSHHHHS CS
  Abhydrolase_1 207 ........................lknvla....ptlvisgtsDplvppkaledlaqllpk.krlvvisdagHlafleg 256
                                            +k+v +    p+lv++++sD+l+++++++++a+ +p+ k++ +is +gH+ fl++
     EPX71372.1 355 ancyisitkkldthdvsrdrgsedPKEVMKhltlPVLVLGIESDGLFTYDEQVEIASCFPNgKLETIISAEGHDGFLLE 433
                    ************************7777777778******************************************987 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 1.9
                    CHHHHHHHHHHHHHHHHCCSCHHHHHHHHH CS
  Abhydrolase_1 129 dgyaadcarnpagplladelaaleqrhrlv 158
                    + y++++++ ++g++++ ++a  e++++ +
     EPX71372.1 438 NSYIQKFEEEHLGDIMSQKNASAELELESL 467
                    779999999999999999999988887765 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   1.0   1.8e-09   8.2e-06       1     153 [.      69     270 ..      69     336 .. 0.70

  Alignments for each domain:
  == domain 1  score: 26.6 bits;  conditional E-value: 1.8e-09
                    EEEE--GC.......GCHHHH....HHHHCCTCEEEEE--TTS..TS-GGCS--HHH..............CHHHHHHHCCTT....TTSE.EEEE CS
  Abhydrolase_6   1 vlllHGagss..assWlvapL....aallaagvhvlapDlpGh..Grsdpppldled..............ladlaalldelaa..gggpv.vlvG 71 
                    +ll+H++++s  a +W ++p+    +a+ + ++ ++++   G   G  + +p +++               ++d++al   + +  g  ++  +vG
     EPX71372.1  69 LLLCHALSGSadAADW-WGPMlgpgRAFDPTHFFIVCLNSLGSpyG--SASPVTWNSetksiygpefplttVRDDVALHKLVLQrlGVEQIaMAVG 161
                    799**96655668888.67887888888888887799999999999..5555555443333322222222256666655555556556666799** PP

                    ETCHHHHHHHHHHCC..............................EEEEES-..----TTTS----TTHHHHHHTT-C..CCCHCCHS-HSCCCCH CS
  Abhydrolase_6  72 HSlGGalalaaapla............................lvvgvlldppptalpagllaaalelllallallrl..lawlsreplprlflad 137
                     S+GG+l+l+    a                            ++ +++ dp    + +g+ ++  ++l +l+a++++  l+++s++++ r+f ++
     EPX71372.1 162 GSMGGMLVLE---WAfdtnyvrsivpistslrhsawciswseaQRQSIYSDP---KFNDGFYDMDDQPLSGLGAARMSalLTYRSKCSFERRFARK 251
                    **********...887777888888888888888888888877767788888...99999988888888888887777445555555777788886 PP

                    HH...CCCCHCHCCCGHHH CS
  Abhydrolase_6 138 ed...adaawrarlarlaa 153
                     +    +++  +  +++ +
     EPX71372.1 252 SPdynRHPYPDRVPTPMTP 270
                    6633213333333333333 PP

>> BES1_N  BES1/BZR1 plant transcription factor, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.9   1.4e-05     0.064      56     146 ..     272     360 ..     270     366 .. 0.45

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.4e-05
      BES1_N  56 eAGWvVeeDGTTyrkgckppa...seasdvvgssasasvesslqaslks.salkspvesynaspassslrspasldsvvlaeeknekveksslip 146
                 +A WvV+++G  yr+   p +   s+ ++ ++ s++as + sl++s+ s s+++sp       pa++ + s++s+     a++ ++++++++ i+
  EPX71372.1 272 DAHWVVHNEGNGYRRER-PSRsrdSSPESPASGSVKASSTPSLSQSTGSvSGTQSPSLR---RPANT-YFSAQSYLR-YQAKKFVGRFDANCYIS 360
                 689***********643.32201133334444444444444444422220233333332...23322.223333322.23445555555555555 PP

>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.0    0.0003       1.4      58     113 ..     137     191 ..     124     208 .. 0.76
   2 ?    0.5   0.0     0.065   2.9e+02     184     219 ..     380     415 ..     335     428 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0003
  Hydrolase_4  58 yvdDlaafvekvkeehpelplfllGhSmGGliallyllrypdkvaglilsaPalki 113
                  + dD+a +   +++   e+  + +G SmGG+++l+++ +    v+ ++ +++ l+ 
   EPX71372.1 137 VRDDVALHKLVLQRLGVEQIAMAVGGSMGGMLVLEWAFDTNY-VRSIVPISTSLRH 191
                  556666554444455555567789*************98888.8888888777765 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.065
  Hydrolase_4 184 eeraakitlPllllhGeaDkvvdpeasrelyerlgs 219
                  +e  +++tlP+l+l  e+D +  ++++ e++   + 
   EPX71372.1 380 KEVMKHLTLPVLVLGIESDGLFTYDEQVEIASCFPN 415
                  566789999999999999999999999888877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (484 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       497  (0.0277205); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.30s 00:00:00.86 Elapsed: 00:00:00.46
# Mc/sec: 3184.70
//
Query:       EPX71373.1  [L=404]
Description: acetohydroxyacid reductoisomerase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.1e-48  162.8   0.1      8e-48  162.1   0.1    1.2  1  IlvN           Acetohydroxy acid isomeroreductase, NADPH-bind
    4.5e-38  130.8   0.0    7.1e-38  130.1   0.0    1.3  1  IlvC           Acetohydroxy acid isomeroreductase, catalytic 
  ------ inclusion threshold ------
      0.015   15.8   0.0      0.038   14.6   0.0    1.7  1  F420_oxidored  NADP oxidoreductase coenzyme F420-dependent
      0.042   14.0   0.0      0.083   13.1   0.0    1.5  1  NAD_binding_2  NAD binding domain of 6-phosphogluconate dehyd


Domain annotation for each model (and alignments):
>> IlvN  Acetohydroxy acid isomeroreductase, NADPH-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  162.1   0.1   1.8e-51     8e-48       2     161 ..      82     247 ..      81     249 .. 0.94

  Alignments for each domain:
  == domain 1  score: 162.1 bits;  conditional E-value: 1.8e-51
                 HHTS-EEEES-SHHHHHHHHHHHHTT--EEEEE-TT-HHHHHHHHTT-....EEEEHHHHHHT-SEEEE-S-HHHHHHHHHHHTGGG--TT-EEEESSS CS
        IlvN   2 lkgkkiaviGyGsqGhaqalnlrdsgldvvvglregsksvkkAkeegf....evltvaeavkkadvvmiliPDelqkevyeeeiepnlkegkalafahG 96 
                 +k+ ++a+iGyGsqGh q+ln rd+gl+vvvg+r++++s+k+A e+g+    +   v+ea++k  ++m+l+ D +q+e +  +i+p++++gk+l f+hG
  EPX71373.1  82 FKNDTLAIIGYGSQGHGQGLNARDQGLNVVVGVRKDGASWKQAIEDGWvpgkTLFPVEEAISKGTIIMNLLSDAAQTETW-PQIAPHITKGKTLYFSHG 179
                 58899*****************************************98222245679***********************.99**************** PP

                 HHHHTT...SS---TTSEEEEEEESS-SHHHHHHHHTT----EEEEEEE-SSS-HHHHHHHHHHHTTH CS
        IlvN  97 fnihfg...likppkdvdvvlvAPkgpGhlvreeyeegkGvpaliaveqdasgkakelalayakgiGa 161
                 f++ f+   +i+ppkdvdv+lvAPkg G++vr+ ++eg+G+ + +av+qd++gka+e+a+ +a ++G+
  EPX71373.1 180 FSVIFKdqtKIQPPKDVDVILVAPKGSGRTVRTLFKEGRGINSSFAVYQDVTGKAQEKAIGLAVAVGS 247
                 ****974447*******************************************************997 PP

>> IlvC  Acetohydroxy acid isomeroreductase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.1   0.0   1.6e-41   7.1e-38       1     143 [.     255     399 ..     255     400 .. 0.91

  Alignments for each domain:
  == domain 1  score: 130.1 bits;  conditional E-value: 1.6e-41
                 HHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTT--HHHHHHHHTHHH.HHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHS-HHHHHHHHHHHHH CS
        IlvC   1 FkeEtetDlfgEqavLcGgvselveagFetlveaGyspelAyfeclhel.klivdliyegGiakmresiSdtaeygdltagprviteevkeemkeilee 98 
                 Fk+E+ +Dl+gE+++L+Gg+ +l+ a++++l+e+G+sp +A++e+++e+ +++++li + G+++m  ++S+ta++g+ ++ +r+  e+ k+++++++++
  EPX71373.1 255 FKKEVVSDLVGERGCLMGGINGLFLAQYQVLRERGHSPAEAFNETVEEAtQSLYPLIGKYGLDYMFAACSTTARRGAIDWTNRF-LEANKKVLNDLYDN 352
                 9***********************************************99**********************************.7************* PP

                 HHTTHHHHHHHHHHHT.TSHHH.HHHHHHHHTSHHHHHHHHHHHCHT CS
        IlvC  99 iqsGefakevieenka.grpel.kklrkeeaeheiekvgkklralmp 143
                 +++G++ak+ ++ n+a ++ el +k  +e ++ ei+k+g+++r+l+p
  EPX71373.1 353 VENGNEAKRSLAYNSApNYRELyDKELEEIRNLEIWKAGETVRSLRP 399
                 ************9655544444123334555*************997 PP

>> F420_oxidored  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   8.6e-06     0.038       2      90 ..      87     173 ..      86     174 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 8.6e-06
                    EEEETTSHHHHHHHHHHHHTTS-GGCEEEEEESSCCCHHHHHHHHC....-EEECECHHHHHHH-SEEEE-S-HHHHHHHHHHCGHHHHTTSE CS
  F420_oxidored   2 igiiGaGnmgealasgllaagaqpheivvansrnpekaeelaeelg....vkvtavdneeaaeeadvvvlavkpedveevlselakdalkgkl 90 
                    ++iiG+G++g++  +++  +g    ++vv+  r+    ++++++++    ++ t  + eea+++ +++   +  ++ +e++ ++a++  kgk+
     EPX71373.1  87 LAIIGYGSQGHGQGLNARDQG---LNVVVG-VRKDG--ASWKQAIEdgwvPGKTLFPVEEAISKGTIIMNLLSDAAQTETWPQIAPHITKGKT 173
                    89*******************...****88.77666..45666666558867777789*****999999999999999999999888888886 PP

>> NAD_binding_2  NAD binding domain of 6-phosphogluconate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   1.9e-05     0.083       2      86 ..      87     174 ..      86     187 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.9e-05
                    EEEE--SHHHHHHHHHHHHTT-EEEEE-SSH.HHHHHHHHTT...EEE-SSHHHHHHHCSEEEE-SSSHHHHHHHHHSHCCC--TT-EE CS
  NAD_binding_2   2 igfiGlGvMGsnmalnllkagykvavynrtk.ekveelvaeg...akaaesieelvasldvvitmvkagkavdeviegllealkkgdil 86 
                    +++iG G  G+   ln  ++g +v+v  r+  ++ ++++++g    k++  +ee++++  +++ ++++  a  e++ ++++++ kg++l
     EPX71373.1  87 LAIIGYGSQGHGQGLNARDQGLNVVVGVRKDgASWKQAIEDGwvpGKTLFPVEEAISKGTIIMNLLSDA-AQTETWPQIAPHITKGKTL 174
                    799*********************998887637789999999555555556677777766666666665.5567889999999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (404 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       572  (0.0319036); expected 358.6 (0.02)
Passed bias filter:                      534  (0.0297841); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 2636.19
//
Query:       EPX71374.1  [L=322]
Description: ribose methyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.9e-30  104.3   0.0    8.5e-30  103.8   0.0    1.2  1  SpoU_methylase   SpoU rRNA Methylase family
    5.2e-16   58.7   0.0      1e-15   57.8   0.0    1.5  1  SpoU_sub_bind    RNA 2'-O ribose methyltransferase substrate 
    0.00032   20.6   0.0    0.00047   20.1   0.0    1.2  1  Methyltrn_RNA_4  SAM-dependent RNA methyltransferase


Domain annotation for each model (and alignments):
>> SpoU_methylase  SpoU rRNA Methylase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.8   0.0   1.4e-33   8.5e-30       2     142 .]     156     305 ..     155     305 .. 0.88

  Alignments for each domain:
  == domain 1  score: 103.8 bits;  conditional E-value: 1.4e-33
                     EEEEEES-SSHHHHHHHHHHHHHTT-SEEEEESGSSCTCGSHHHHHHCTTHHHHHHEEEESSHHHHHHHHCCCTEEEEEESTT-SEGCCSHHH.. CS
  SpoU_methylase   2 livvlveiedpgNlGaiaRtakafgaselvlvkprsadllnpeakraaagalevlelkvvdsleealkelkeegfalvatslkgkslseidlk.. 94 
                     l++++++i+dp+NlGai+R+ + +g+++++l+k +++++l+p + +a+agale+++++++++  ++lk++  ++++++at + g+  +e + +  
      EPX71374.1 156 LYIYCDGISDPQNLGAIIRSSYFLGVHGILLSK-KHNSVLSPVVSKASAGALELMNIYRIQNPIQFLKDCSLKDWKVFATAPMGSMSNENQTSll 249
                     799****************************88.5556******************************************994444442211122 PP

                     ........TTEEEEEEBTTTBS-HHHHCTSSEEEE---.-TTSSS--HHHHHHHHHH CS
  SpoU_methylase  95 ........ekvalvfGnEdkGlsnelleladrlvkIpm.sgeveSLNvavAvailly 142
                             +++++vfG E +Gl++++++++++++++p  +  v+SLNv+vA++i+l+
      EPX71374.1 250 tmpeslavKPKIVVFGGE-HGLRTNMIRQCEYILTLPHgDRFVDSLNVSVAAGIILH 305
                     34466789**********.9*****************977788***********985 PP

>> SpoU_sub_bind  RNA 2'-O ribose methyltransferase substrate binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.8   0.0   1.7e-19     1e-15       1      76 []      47     122 ..      47     122 .. 0.96

  Alignments for each domain:
  == domain 1  score: 57.8 bits;  conditional E-value: 1.7e-19
  SpoU_sub_bind   1 liyGlhaVleaLksgrr.iekllvtegradkrleellklakkrgikvelvdkekLdklsgtanHQGvvaevkpleya 76 
                    ++yG h+V+ aL++g+r +e l+ +++++ +++++ll+l+ k++i+  l  k++L++l+++ +H+G+v++++ple++
     EPX71374.1  47 YLYGDHPVRNALQAGKRsFECLFAQSSKQLNEYQTLLNLL-KLNIPCRLTGKHELNELTNSRPHNGIVLKASPLEPP 122
                    79*************999**********************.789*****************************9985 PP

>> Methyltrn_RNA_4  SAM-dependent RNA methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   7.9e-08   0.00047      92     177 ..     218     304 ..     198     308 .. 0.79

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 7.9e-08
                      HHHHHHHHSS--EEEE--SS...--SS-B-HHHHHHHHHH--S-EEEEE--TT---HHHHTT-SEEB--TTTTSS-----HHHHHHHHH CS
  Methyltrn_RNA_4  92 leeiekeegkkplvvatsAr...kkentvsyeelrelleeeekpvlllfGtgwGlaeevlekadyiLepirgaseynHLsvrsAvaiil 177
                      ++ +++ + k+ +v+at      ++en++s+ ++ e l  + kp +++fG  +Gl ++++++++yiL+  +g    + L v  A+ iil
       EPX71374.1 218 IQFLKDCSLKDWKVFATAPMgsmSNENQTSLLTMPESL--AVKPKIVVFGGEHGLRTNMIRQCEYILTLPHGDRFVDSLNVSVAAGIIL 304
                      55555555555566666544444778888999999999..999*************************999999999**********99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       371  (0.0206927); expected 358.6 (0.02)
Passed bias filter:                      347  (0.0193541); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 2214.00
//
Query:       EPX71375.1  [L=327]
Description: actin-like protein Arp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-90  304.3   0.0    1.9e-89  300.1   0.0    1.9  1  Actin     Actin
  ------ inclusion threshold ------
       0.23   10.2   0.0       0.43    9.3   0.0    1.3  1  MreB_Mbl  MreB/Mbl protein


Domain annotation for each model (and alignments):
>> Actin  Actin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  300.1   0.0   2.1e-93   1.9e-89      43     395 ..       6     319 ..       2     326 .. 0.95

  Alignments for each domain:
  == domain 1  score: 300.1 bits;  conditional E-value: 2.1e-93
       Actin  43 eaklyvgdealtkrpelevrspvedGvvedwdaveelwehvlkeelkvdpeehpllltepplnppkqrekalEivfEkfkvpalylaksavlsafasgk 141
                 +++ y+g++ ++ r+ l++++pv++G+v++w ++e++w+ ++ +el++ pe+hp+ll+e p+n++k++e+++Ei+fE+f+vpal ++ ++vl+++++++
  EPX71375.1   6 QQDTYIGSKVQELRGLLKLEYPVQRGLVKNWCDMEKIWSWIYSNELQTLPEDHPVLLAETPFNNAKNKERMAEIFFETFNVPALNFSLQPVLALYSTAR 104
                 45789**998889************************************************************************************** PP

       Actin 142 stglvvDsGasvtsvvpVldGyvLkkairrsdlgGkaLteqlkellssknvevtprylikkkkvveaessaekeelekltesyktleeeevleeiKesv 240
                 +tglvv++G++ t+ vpV+dG+vL+   +r d gGk++te l+  l++                              l++ + t++e e+++eiKe++
  EPX71375.1 105 TTGLVVEVGEGLTHTVPVFDGFVLSS-AQRDDYGGKDVTEFLQLQLRQ------------------------------LGYRFVTSAEAEIVREIKEAC 172
                 ************************86.5889************99999..............................59******************* PP

       Actin 241 cevsedpegdeekss..sspeksYeLPDgseiklgeeRfkvpEiLFdpsligsesaleeekskllgiselivaainacdvdlrpeLlanivvtGGnsll 337
                 c+vs +++++e+++s  +   ++++LPDg+ +klg+e f++pE+LF+p+lig e+          g+++ i++a+ ++d dlr++Ll+niv++GG +ll
  EPX71375.1 173 CYVSPNFQTEEKTNSsfNTKLRQFTLPDGQILKLGSECFRAPELLFRPELIGYENG---------GVQHQITQAVLRSDLDLRKDLLNNIVLSGGGTLL 262
                 ********755555556788889*******************************99.........********************************** PP

       Actin 338 pglteRlekelaqlaskgvkvkiiapeeerkysaWiGGSiLAslgtfqqlwvskqEYe 395
                  g+ +Rl kel+        vki++p+ er+++aW+G+SiLAs +tf+++ ++ + Y+
  EPX71375.1 263 SGFGDRLLKELQGSGDVPNCVKIYTPK-ERRHAAWTGASILASFSTFSNIQITSETYK 319
                 *************6555558*******.*****************************7 PP

>> MreB_Mbl  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.0   4.8e-05      0.43     256     298 ..     233     274 ..     227     282 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 4.8e-05
                 HHHHHHHTS-HHHHHHHHHH-EEEESGGGGSBTHHHHHHHHHS CS
    MreB_Mbl 256 avkevLektppeLaadivdrgivltGGgallkgldkllseetg 298
                 +++++  +   +L +d++++ ivl+GGg+ll g+ + l +e++
  EPX71375.1 233 QITQAVLRSDLDLRKDLLNN-IVLSGGGTLLSGFGDRLLKELQ 274
                 56677777888999999976.99***********998888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       441  (0.024597); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2335.09
//
Query:       EPX71376.1  [L=106]
Description: stress responsive orphan 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       360  (0.0200792); expected 358.6 (0.02)
Passed bias filter:                      234  (0.0130515); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.24s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 816.12
//
Query:       EPX71377.1  [L=660]
Description: MCM-associated protein Mcm10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.8e-15   55.9   1.6    5.6e-15   54.9   1.6    1.6  1  zf-primase       Primase zinc finger
     0.0073   16.3   0.0      0.014   15.3   0.0    1.5  1  tRNA_anti-codon  OB-fold nucleic acid binding domain
  ------ inclusion threshold ------
        8.4    6.6  11.7         11    6.2   6.5    2.5  2  Med30            Mediator complex subunit 30


Domain annotation for each model (and alignments):
>> zf-primase  Primase zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.9   1.6   9.4e-19   5.6e-15       1      46 []     309     354 ..     309     354 .. 0.98

  Alignments for each domain:
  == domain 1  score: 54.9 bits;  conditional E-value: 9.4e-19
  zf-primase   1 GrskDlglCkatkkdgkkCgswvnkrkgeyCdfHvqsavkkarakR 46 
                 G+sk+lg+C+++kk+g+ C++w + r +e+C+fHv++av+++ ++R
  EPX71377.1 309 GKSKHLGYCQSRKKNGELCKHWLDNRLSEVCEFHVDMAVQRTMSRR 354
                 99****************************************9988 PP

>> tRNA_anti-codon  OB-fold nucleic acid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   2.4e-06     0.014      12      56 ..     237     280 ..     223     304 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 2.4e-06
                      EEEETTEEEEEEEETTEEEEEEEETHHHHHHHTTS-TTSEEEEEE CS
  tRNA_anti-codon  12 drsggkvifidlrDgtgriqvvlfreeatklaenlkeGdvvrvtG 56 
                      + +++k++ ++l+D   +++v+lf  +a++ + ++++G+vv   +
       EPX71377.1 237 TIHKKKYCMLTLTDLKWQMEVFLFG-KAFERYWKVQPGTVVALLC 280
                      55789********************.***************9876 PP

>> Med30  Mediator complex subunit 30
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   6.5    0.0019        11      93     137 ..       9      53 ..       5      56 .. 0.90
   2 ?    2.4   0.2     0.027   1.6e+02      95     127 ..     407     440 ..     389     445 .. 0.72

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0019
       Med30  93 ekskreerkkseevkqlkeerkelleklkeknkqLkeimdqlrkl 137
                 ++s++e++++s+  ++l+ee+k+l+ +l e++k+++ei+++ rk+
  EPX71377.1   9 IHSRMEDMNDSSGKEELTEEEKQLQAQLLEVQKKMEEIKQKKRKV 53 
                 468999*********************************998875 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.027
       Med30  95 skreerkkseevkqlkeer.kelleklkeknkqL 127
                 ++  +rk++ + +q+k+er +e+l++l +k   L
  EPX71377.1 407 QQERDRKERYKRQQAKAEReREILQRLTMKRSSL 440
                 4445566666777787776368999999998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (660 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2609  (0.145518); expected 358.6 (0.02)
Passed bias filter:                      806  (0.0449551); expected 358.6 (0.02)
Passed Vit filter:                        91  (0.00507558); expected 17.9 (0.001)
Passed Fwd filter:                        20  (0.00111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.88u 0.34s 00:00:01.22 Elapsed: 00:00:00.48
# Mc/sec: 4094.49
//
Query:       EPX71378.1  [L=255]
Description: hypothetical protein SOCG_01596 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
        0.3   10.9   0.0        0.3   10.9   0.0    2.8  4  Synaptobrevin  Synaptobrevin
       0.46    9.2   4.5      0.068   11.9   0.3    1.6  2  DUF2207        Predicted membrane protein (DUF2207)
          9    6.2   9.8         13    5.7   2.6    2.1  2  DUF2975        Protein of unknown function (DUF2975)


Domain annotation for each model (and alignments):
>> Synaptobrevin  Synaptobrevin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1       1.3     8e+03      19      38 ..       1      20 [.       1      25 [. 0.74
   2 ?   10.9   0.0     5e-05       0.3      33      82 ..      44      95 ..      39     100 .. 0.65
   3 ?   -2.7   1.3       0.9   5.4e+03      73      84 ..     115     126 ..     106     129 .. 0.47
   4 ?   -0.6   0.5       0.2   1.2e+03      58      85 ..     162     189 ..     157     194 .. 0.49

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.3
                   HCCHHHHCHCCCCCHHHHCC CS
  Synaptobrevin 19 mkeNidkvlergekldeLvd 38
                   mk+   +v +++e l +L d
     EPX71378.1  1 MKNKYTSVSDSEESLKTLTD 20
                   67777888889999998865 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 5e-05
                   HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHTX...XXXXXXXXXXXXXXXX CS
  Synaptobrevin 33 ldeLvdktenLqssaqqFkkqarklkrkmwwknm...kliiililvvlilili 82
                   l++ +  ++n ++++ + ++++  l ++ wwkn+     +iil++ v++l +i
     EPX71378.1 44 LEMADGSAQNSAQESVD-NTRSDPLTNEKWWKNFsigTATIILFYNVVCLAII 95
                   56666677777777776.678999**********4443344444444333333 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 0.9
                    XXXXXXXXXXXX CS
  Synaptobrevin  73 ilvvlililiii 84 
                    i+ ++i++l i+
     EPX71378.1 115 IASIFIFLLTIL 126
                    333333333333 PP

  == domain 4  score: -0.6 bits;  conditional E-value: 0.2
                    HHHHHHHTXXXXXXXXXXXXXXXXXXXX CS
  Synaptobrevin  58 krkmwwknmkliiililvvlililiiii 85 
                    k+ m ++++  + + +++++ ++l+++i
     EPX71378.1 162 KKIMQFEKINNRFFYVVCFVDFVLFVFI 189
                    4555555554444444333333333333 PP

>> DUF2207  Predicted membrane protein (DUF2207)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.3   1.1e-05     0.068     349     429 ..      44     123 ..       2     141 .. 0.67
   2 ?   -1.6   0.5      0.14   8.6e+02     386     421 ..     172     221 ..     137     233 .. 0.56

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 1.1e-05
     DUF2207 349 kakkfkkalkkwksavkkkergyfdkkgkkklkklsalglgliilglilillallllvlllvfllilllillliaiivlll 429
                 +     +a ++ +++v+++++  +++++ +k ++++++ ++l+  +++l++++ + + +  +++++ l ++ +++i+++ll
  EPX71378.1  44 LEMADGSAQNSAQESVDNTRSDPLTNEKWWKNFSIGTATIILFYNVVCLAIIFGYKVSP-YSIAFYGLAGVSIASIFIFLL 123
                 55555678899999999999999999999999999999999999999998888888666.555555555555555555544 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.14
     DUF2207 386 lglgliilglilillallllvll..............lvfllilllilll 421
                   ++++++++ ++l+++++++++               ++ +i++++ ++
  EPX71378.1 172 NRFFYVVCFVDFVLFVFISMNPIarerlrllvidignGIGNGIIGIGNGI 221
                 33444444444444555555555555556655555555555555555555 PP

>> DUF2975  Protein of unknown function (DUF2975)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   2.6    0.0021        13      65     112 ..      77     126 ..      69     128 .. 0.72
   2 ?    4.8   0.8    0.0041        24      65     110 ..     139     189 ..     131     191 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0021
     DUF2975  65 aliaaalllaagivalallaelelap..gvvllllgvafaslvigllvlv 112
                 ++ +a+++l+ ++v la++  ++++p  + + +l gv++as++i ll ++
  EPX71378.1  77 SIGTATIILFYNVVCLAIIFGYKVSPysIAFYGLAGVSIASIFIFLLTIL 126
                 45566788888888888888877999444455677888889999888766 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.0041
     DUF2975  65 aliaa....alllaagivalallae.lelapgvvllllgvafaslvigllv 110
                  ++++    ++l ++g+ +++ +++ ++++ + + ++ +v f+ +v+ +++
  EPX71378.1 139 NMCVSalyvCFLNVPGFSMYYTAKKiMQFEKINNRFFYVVCFVDFVLFVFI 189
                 4455455669*********************************99999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       944  (0.0526521); expected 358.6 (0.02)
Passed bias filter:                      512  (0.0285571); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.29s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 1697.57
//
Query:       EPX71379.1  [L=299]
Description: NAD dependent epimerase/dehydratase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.9e-19   69.5   0.0    3.9e-19   69.1   0.0    1.1  1  Epimerase        NAD dependent epimerase/dehydratase family
      2e-10   40.9   0.1    3.1e-10   40.3   0.1    1.4  1  NAD_binding_10   NAD(P)H-binding
    3.8e-09   36.1   0.0    4.8e-09   35.7   0.0    1.1  1  RmlD_sub_bind    RmlD substrate binding domain
    9.1e-09   35.2   0.1    1.7e-08   34.3   0.1    1.5  1  NmrA             NmrA-like family
    2.7e-07   29.9   0.0    1.8e-05   23.9   0.0    2.2  2  3Beta_HSD        3-beta hydroxysteroid dehydrogenase/isomeras
    1.1e-06   28.3   0.0    5.8e-06   25.9   0.0    2.0  2  GDP_Man_Dehyd    GDP-mannose 4,6 dehydratase
    4.6e-05   22.7   0.1      7e-05   22.1   0.1    1.4  1  NAD_binding_4    Male sterility protein
    0.00028   20.4   0.1    0.00047   19.7   0.1    1.4  1  adh_short        short chain dehydrogenase
    0.00048   19.4   0.0      0.002   17.3   0.1    1.9  2  Polysacc_synt_2  Polysaccharide biosynthesis protein
     0.0014   19.2   0.1     0.0032   18.0   0.1    1.6  1  F420_oxidored    NADP oxidoreductase coenzyme F420-dependent
     0.0065   16.6   0.2      0.015   15.4   0.2    1.8  1  DapB_N           Dihydrodipicolinate reductase, N-terminus
     0.0087   16.0   0.0      0.039   13.9   0.0    2.1  3  ADH_zinc_N       Zinc-binding dehydrogenase
     0.0092   16.4   0.0      0.049   14.1   0.0    2.1  2  Semialdhyde_dh   Semialdehyde dehydrogenase, NAD binding doma
  ------ inclusion threshold ------
      0.024   14.9   0.0      0.044   14.0   0.0    1.4  1  TrkA_N           TrkA-N domain
      0.035   14.3   0.0       0.07   13.3   0.0    1.5  1  NAD_binding_2    NAD binding domain of 6-phosphogluconate deh
       0.19   11.7   0.5       0.42   10.5   0.5    1.7  1  KR               KR domain


Domain annotation for each model (and alignments):
>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.1   0.0   3.4e-22   3.9e-19       1     235 [.       3     218 ..       3     222 .. 0.89

  Alignments for each domain:
  == domain 1  score: 69.1 bits;  conditional E-value: 3.4e-22
                 EEEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHCEEEE--TT-HHHHHHHHHHHT-SEEEE--S.---HHHHHHSHHHHHHHHTHHHHHH CS
   Epimerase   1 ilVtGatGfiGsalvkallekgyevigldrlssasntarledlelveldltdrsalerlfkeeqpdavihlAa.vggvaassedpadfieknlqgtlnl 98 
                 ++VtGatGfiGs +v++ll+ g+evigl r +++ ++ + + +  + + l d ++l+   +  q d vih A     +++ s++p+   e+++++  ++
  EPX71379.1   3 VFVTGATGFIGSEIVRQLLAGGHEVIGLVRSEEKAAKLKAAGAIPHFGSLEDLDSLKTGAA--QSDGVIHTAFnHDFIHDFSKYPKS-CEADCRVIETI 98 
                 68*****************************999999888888***************999..9*********99999999999988.78999999999 PP

                 HHHHHHHTCTEEEEEEEGGGGTSCSSSSBSTCSTTS----SSHHHHHHHHHHHHHHHHHHHHT-EEEEEEESEEESTTS-TTSTTSHHHHHHHHHHTTS CS
   Epimerase  99 leaarkagvkrllflsSsevYGkdaeqpkeettltgplkpnspYaaaKlageklveayaaqyglnaiilrlfnlyGprngegevsrvipalirkilegk 197
                  e+++ ++   ++  s ++v +   +   +e+t   +++++   +++ ++ge+ + ++a q+  + ++    ++ Gp+     +  +ip +i+ ++++ 
  EPX71379.1  99 GEVLKGSNR-PFVTTSGTAVLPSTGTL-GTEVT---EIPQS---SISRHLGENATLKLASQGVRSSVVRLAPSVHGPG-----DYAFIPMIISIAKAKG 184
                 999999999.9***********99996.89999...77555...59************99996666666667999***.....******6666555555 PP

                 SSEEEETTST-EEEEEEHHHHHHHHHHHHHHHTT-STT CS
   Epimerase 198 qevtllgdgtalRdflyveDvaeaillvlehvdagdkg 235
                  e +++ +g+++++ ++ +D+a++++l+le+   g +g
  EPX71379.1 185 -ESVYVEQGSNRWPSVHRQDAANLFILALEK---GTPG 218
                 .99999************************9...5544 PP

>> NAD_binding_10  NAD(P)H-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.3   0.1   2.7e-13   3.1e-10       1      73 [.       7      77 ..       7     161 .. 0.79

  Alignments for each domain:
  == domain 1  score: 40.3 bits;  conditional E-value: 2.7e-13
                    TTTSHHHHHHHHHHHHC-T-EEEEEETTHHHCHHHHCTTTCEEEE--TT-CCHHHHHHTT-SEEEES---TCC CS
  NAD_binding_10  1 GAtGkvGrllvkellargghevtalvRnpeklaeleaeeglevvegdvtdvedlaealkgadaVvsalggggk 73
                    GAtG +G+++v++lla  ghev  lvR++ek+a+l+ ++g+    g+++d ++l+   ++ d V+ ++ +++ 
      EPX71379.1  7 GATGFIGSEIVRQLLAG-GHEVIGLVRSEEKAAKLK-AAGAIPHFGSLEDLDSLKTGAAQSDGVIHTAFNHDF 77
                    9***************9.5****************7.69999999********************99966654 PP

>> RmlD_sub_bind  RmlD substrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.7   0.0   4.2e-12   4.8e-09       1     235 [.       1     246 [.       1     279 [. 0.84

  Alignments for each domain:
  == domain 1  score: 35.7 bits;  conditional E-value: 4.2e-12
                    EEEEEESTTSHHHHHHHHHCTTTSEEEEEE-TTT--TTSHHHHHHHH.............HHH--SEEEE------HHHHHHSHHHHHHHHTHHHH CS
  RmlD_sub_bind   1 mkilvtGanGqlGseLakqlaeeglevlaltreeldltdaeavaell.............keakpdvvvnaAAytavDkaEseeeaayavnaeave 83 
                    m++ vtGa+G +Gse+++ql + g+ev++l r+e   ++ +a+ ++               +a+ d v+++A+ ++  +  s+  ++ +++ +  e
     EPX71379.1   1 MRVFVTGATGFIGSEIVRQLLAGGHEVIGLVRSEEKAAKLKAAGAIPhfgsledldslktGAAQSDGVIHTAFNHDFIHDFSKYPKSCEADCRVIE 96 
                    89****************************999655555555544445557777777776778899****************************** PP

                    HHHHHHHHCT-EEEEEEEGGGS-S-TTS-B-TTS----SSHHHHHHHHHHHHHHH...H-SSEEEEEE-.SEESSSSS-HHHHHHHHH.HH-SEEE CS
  RmlD_sub_bind  84 alAeaaaavgalLihvStDyVFdGekkrpYeeddetsPlnvYGrtKlaGEqavla...agkkalivRts.wvygekgknfvktmlrla.kereelk 174
                    ++ e+ +  + +++  S   V + + +   e   +  P++    ++++GE+a l+   +g +  +vR +  v g  +  f+  +++ a ++ e++ 
     EPX71379.1  97 TIGEVLKGSNRPFVTTSGTAVLPSTGTLGTEV--TEIPQSS--ISRHLGENATLKlasQGVRSSVVRLApSVHGPGDYAFIPMIISIAkAKGESVY 188
                    ************************97775555..5557775..699******9987768889*****9757****************967889999 PP

                    EESS-EE--EEHHHHHHHHHHHHHHCHH.GGG-EEEE---BS-EEHHHHHHHHHHHHCHTT CS
  RmlD_sub_bind 175 vvaDqlgsPTsardlAevllqllekaaeekelagvyHlanegetswlefArailkeagads 235
                    v +   + P+  r+ A+ l+ l+ ++       +++H ++e+ + + ++A  i k++++  
     EPX71379.1 189 VEQGSNRWPSVHRQDAANLFILALEKGT---PGSIFHGVAEEGIPTKDIATLIGKRLNVPV 246
                    9999*****9887666666666555554...599*******************99998854 PP

>> NmrA  NmrA-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.3   0.1   1.5e-11   1.7e-08       1      71 [.       3      71 ..       3      83 .. 0.91

  Alignments for each domain:
  == domain 1  score: 34.3 bits;  conditional E-value: 1.5e-11
                EEESSTTSHHHHHHHHHHHHHT-EEEEEES-S-SHHHHHHHHSTTEEEES-TT-HHHHHHHHTT-SEEEE- CS
        NmrA  1 IlviGaTGrqGksvvrallkaghkvralvRdtkselakslkeaGvelvkgdlddkeslvealkgvdvvfsv 71
                + v+GaTG +G+ +vr ll+ gh+v  lvR   +e+a++lk+aG+    g+l+d +sl++   ++d+v+ +
  EPX71379.1  3 VFVTGATGFIGSEIVRQLLAGGHEVIGLVRS--EEKAAKLKAAGAIPHFGSLEDLDSLKTGAAQSDGVIHT 71
                579***************************7..57799******************************975 PP

>> 3Beta_HSD  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.0   1.6e-08   1.8e-05       2      80 ..       5      78 ..       4      94 .. 0.91
   2 ?    3.8   0.0     0.022        25     179     230 ..     162     213 ..     140     216 .. 0.88

  Alignments for each domain:
  == domain 1  score: 23.9 bits;  conditional E-value: 1.6e-08
   3Beta_HSD  2 vtGgaGFlGralvkeLvrleelkevrvlDlrespelleelskvnvkkviegDvtdkdkleealegvdvvihlaslvdva 80
                vtG++GF+G+++v++L+  ++     v+ l+ s+e+  +l+  + +  + g + d d+l+    ++d vih+a   d  
  EPX71379.1  5 VTGATGFIGSEIVRQLLAGGH----EVIGLVRSEEKAAKLKAAGAI-PHFGSLEDLDSLKTGAAQSDGVIHTAFNHDFI 78
                9******************97....789999999999999999999.*************************9777655 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.022
   3Beta_HSD 179 agiyGegdkllvpllkqlaklglalfkigdeevlsdrvYvgNvawahilAar 230
                   ++G+gd  + p++  +ak + + + + + ++    v     a   ilA  
  EPX71379.1 162 PSVHGPGDYAFIPMIISIAKAKGESVYVEQGSNRWPSVHRQDAANLFILALE 213
                 469*******************999999999999999999999999999975 PP

>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9   0.0   5.2e-09   5.8e-06       1      34 [.       4      37 ..       4      65 .. 0.86
   2 ?   -0.6   0.0       0.6   6.7e+02     198     246 ..     173     221 ..     170     259 .. 0.82

  Alignments for each domain:
  == domain 1  score: 25.9 bits;  conditional E-value: 5.2e-09
                   EEETTTSHHHHHHHHHHHHCT-CCEEEEEEESS- CS
  GDP_Man_Dehyd  1 LiTGiaGfiGsylaelLlekgyevhgivrrsssf 34
                   ++TG +GfiGs ++++Ll+ g+ev+g+vr +++ 
     EPX71379.1  4 FVTGATGFIGSEIVRQLLAGGHEVIGLVRSEEKA 37
                   59**************************977653 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.6
                    HHHHHHHHTTS-C-EECTTTT-EEEEEEHHHHHHHHHHHHHCSS---EE CS
  GDP_Man_Dehyd 198 travarialgkqevlylGnldakRdwghvkDyveamwlmlqqdkpedyv 246
                    ++++  ia+ k e +y+ +++++    h +D ++ + l+l++++p  + 
     EPX71379.1 173 IPMIISIAKAKGESVYVEQGSNRWPSVHRQDAANLFILALEKGTPGSIF 221
                    5688999999999999999999999999999999999999999997655 PP

>> NAD_binding_4  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.1   6.2e-08     7e-05       1      37 [.       5      39 ..       5      72 .. 0.90

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 6.2e-08
                   EE-TTSHHHHHHHHHHHHHS-.TEEEEEE-SSSHHHH CS
  NAD_binding_4  1 lTGaTGFLGkvLlekLLrttpevkiyllvRaksgesa 37
                   +TGaTGF+G+ ++++LL      +++ lvR++++++ 
     EPX71379.1  5 VTGATGFIGSEIVRQLLAGGH--EVIGLVRSEEKAAK 39
                   7******************98..8******9988554 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.1   4.2e-07   0.00047       3      42 ..       3      42 ..       1      61 [. 0.93

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 4.2e-07
                EEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHH CS
   adh_short  3 vlvtGassGIGraiakelakeGakvvvvdrseekleevak 42
                v+vtGa++ IG +i+++l++ G +v+ + rseek++++++
  EPX71379.1  3 VFVTGATGFIGSEIVRQLLAGGHEVIGLVRSEEKAAKLKA 42
                89*********************************98875 PP

>> Polysacc_synt_2  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.1   1.8e-06     0.002       1      37 [.       3      38 ..       3      74 .. 0.80
   2 ?   -0.8   0.0      0.58   6.5e+02     207     240 ..     202     235 ..     193     258 .. 0.69

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 1.8e-06
                     EEEETTTSHHHHHHHHHHHHHB-SEEEEEES-HHHHH CS
  Polysacc_synt_2  1 vlvtGagGsiGselvrqilkkkpkkiillerdElkly 37
                     v+vtGa+G iGse+vrq+l+   + i l+ ++E++  
       EPX71379.1  3 VFVTGATGFIGSEIVRQLLAGGHEVIGLVRSEEKA-A 38
                     79******************998888888766654.3 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.58
                      HHHHHHHHHHHHH--SS-EEEE--.-EEEHHHHH CS
  Polysacc_synt_2 207 eeavqLvlqalalakggeifvldmGepvkivdla 240
                      ++a++L + al++++ g if   + e +  +d+a
       EPX71379.1 202 QDAANLFILALEKGTPGSIFHGVAEEGIPTKDIA 235
                      6788888888888888888844443344444444 PP

>> F420_oxidored  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.1   2.8e-06    0.0032       6      46 ..       8      44 ..       3      71 .. 0.89

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 2.8e-06
                   TTSHHHHHHHHHHHHTTS-GGCEEEEEESSCCCHHHHHHHH CS
  F420_oxidored  6 GaGnmgealasgllaagaqpheivvansrnpekaeelaeel 46
                   ++G +g+ ++++lla g   he++ +  r++eka++l+++ 
     EPX71379.1  8 ATGFIGSEIVRQLLAGG---HEVI-GLVRSEEKAAKLKAAG 44
                   58***************...****.99**********9875 PP

>> DapB_N  Dihydrodipicolinate reductase, N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.2   1.3e-05     0.015       1      53 [.       1      52 [.       1     135 [. 0.84

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.3e-05
                EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTCSTTTTTBHHHHSSSS-- CS
      DapB_N  1 ikvavvGasGrmGkevvkaveeaedlelvaavdrkeselegkdagellglgkl 53
                ++v v+Ga+G +G+e+v+ + +  ++e+ + v ++e++++ k ag + ++g+l
  EPX71379.1  1 MRVFVTGATGFIGSEIVRQLLA-GGHEVIGLVRSEEKAAKLKAAGAIPHFGSL 52
                89*******************9.9**********9999999999977666544 PP

>> ADH_zinc_N  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.0   3.5e-05     0.039       3      42 ..      13      60 ..      12     103 .. 0.68
   2 ?   -3.2   0.0         7   7.8e+03       5      19 ..     175     189 ..     171     194 .. 0.71
   3 ?   -1.9   0.0       2.7     3e+03       9      40 ..     234     265 ..     228     277 .. 0.63

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 3.5e-05
                HHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTESEEEET........T CS
  ADH_zinc_N  3 GlaavqlAkalGaeviavdsseeklelakklGadeviny........k 42
                G+  v  + a G evi+ ++seek++++k  Ga   + +        +
  EPX71379.1 13 GSEIVRQLLAGGHEVIGLVRSEEKAAKLKAAGAIPHFGSledldslkT 60
                5556666778999*******************9888877433333332 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 7
                 HHHHHHHHTT-EEEE CS
  ADH_zinc_N   5 aavqlAkalGaevia 19 
                 + + +Aka G  v++
  EPX71379.1 175 MIISIAKAKGESVYV 189
                 567777777766655 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 2.7
                 HHHHTT-..EEEEEESSHHHHHHHHHTTESEEEE CS
  ADH_zinc_N   9 lAkalGa..eviavdsseeklelakklGadevin 40 
                 +A  +G   +v +v+ s+e  e  k++G   ++ 
  EPX71379.1 234 IATLIGKrlNVPVVSKSSE--EAKKQFGFLSYFL 265
                 5666666556666666666..5555588655554 PP

>> Semialdhyde_dh  Semialdehyde dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.0   4.4e-05     0.049       1      94 [.       2      95 ..       2     100 .. 0.65
   2 ?   -0.7   0.0       1.6   1.8e+03      65      96 ..     203     234 ..     182     261 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 4.4e-05
                    EEEEETTTSHHHHHHHHHHHC..TSSEEEEEEEESTTTTTSBHHHHSGGGTTTECEBEEEGGGGGCTT-SEEEE-SCHHHHHHH..HHHHHHTTSEE CS
  Semialdhyde_dh  1 kvaivGatGyvGqellrlLee..hpevelvvllsssrsaGkklaeavkaleegkdlkvedvdeeelkevdivflalpagvskel..apklaeagvkv 93
                    +v + GatG +G+e++r L    h  + lv   s+++ a  k a a ++  + +dl   +  + + ++  ++ +a +++  +++  +pk  ea+++v
      EPX71379.1  2 RVFVTGATGFIGSEIVRQLLAggHEVIGLV--RSEEKAAKLKAAGAIPHFGSLEDLDSLK--TGAAQSDGVIHTAFNHDFIHDFskYPKSCEADCRV 94
                    68899**********998888344333333..3555567778888877777777766555..33344444566777777777763345667777777 PP

                    E CS
  Semialdhyde_dh 94 i 94
                    i
      EPX71379.1 95 I 95
                    6 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 1.6
                     TT-SEEEE-SCHHHHHHHHHHHHHTTSEEEES CS
  Semialdhyde_dh  65 kevdivflalpagvskelapklaeagvkviDl 96 
                     +++++ +lal++g+  ++ + +ae+g+   D 
      EPX71379.1 203 DAANLFILALEKGTPGSIFHGVAEEGIPTKDI 234
                     56788889999999999999999888876555 PP

>> TrkA_N  TrkA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   3.9e-05     0.044       7      67 ..      10      69 ..       3      84 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 3.9e-05
                SHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGGESEEE CS
      TrkA_N  7 GrvGrslaeeLseggkdvvvidkdeerveelreeglevvvgdatdeevLeeagiekadavi 67
                G +G++++++L +gg++v++  ++ee++++l++ g+    g+  d + L+  g+++ d+vi
  EPX71379.1 10 GFIGSEIVRQLLAGGHEVIGLVRSEEKAAKLKAAGAIPHFGSLEDLDSLKT-GAAQSDGVI 69
                779**********5557******************9999999999999875.445555555 PP

>> NAD_binding_2  NAD binding domain of 6-phosphogluconate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   6.3e-05      0.07       7      43 ..       9      52 ..       3      78 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 6.3e-05
                   -SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT.......E CS
  NAD_binding_2  7 lGvMGsnmalnllkagykvavynrtkekveelvaeg.......a 43
                   +G +Gs+++++ll+ g++v++  r++ek+ +l a+g       +
     EPX71379.1  9 TGFIGSEIVRQLLAGGHEVIGLVRSEEKAAKLKAAGaiphfgsL 52
                   5889*******************************954443333 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.5   0.00038      0.42       4      35 ..       4      34 ..       2      76 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00038
                EEETTTSHHHHHHHHHHHHHHS-EEEEE-SS. CS
          KR  4 litGGlGgLGlelarwlaekgarhlvllsRsa 35
                ++tG++G +G e++r+l++ g + + l+ Rs+
  EPX71379.1  4 FVTGATGFIGSEIVRQLLAGGHEVIGLV-RSE 34
                79****************9998877766.442 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (299 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       347  (0.0193541); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2115.06
//
Query:       EPX71380.1  [L=87]
Description: hypothetical protein SOCG_01598 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       440  (0.0245412); expected 358.6 (0.02)
Passed bias filter:                      287  (0.0160076); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.27s 00:00:00.64 Elapsed: 00:00:00.42
# Mc/sec: 616.74
//
Query:       EPX71381.1  [L=207]
Description: hypothetical protein SOCG_01599 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       935  (0.0521501); expected 358.6 (0.02)
Passed bias filter:                      509  (0.0283898); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1617.45
//
Query:       EPX71382.1  [L=120]
Description: inner membrane protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-21   76.3   0.2    2.5e-21   75.9   0.2    1.1  1  COX16     Cytochrome c oxidase assembly protein COX16


Domain annotation for each model (and alignments):
>> COX16  Cytochrome c oxidase assembly protein COX16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.9   0.2   1.4e-25   2.5e-21       2      79 .]      22     102 ..      21     102 .. 0.96

  Alignments for each domain:
  == domain 1  score: 75.9 bits;  conditional E-value: 1.4e-25
       COX16   2 lfGlPflllivgGsfgLteftqlryevrdrkvkelskeealelkkkrrkvdleeeyerlqak...ldlddWenkRvpRpke 79 
                  +G Pf+ +i++ +++  +++q+++++rd++vk l+kee+l+l+k+rrkv+++eey+r++ +   ++  d+enkRvpR+++
  EPX71382.1  22 WVGAPFMGSILLVWIFAIPIAQIKFTRRDEQVKTLTKEEQLDLNKRRRKVNVNEEYYRIMLDkmqQESGDYENKRVPRLPG 102
                 68*********************************************************9887888999*********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       981  (0.0547158); expected 358.6 (0.02)
Passed bias filter:                      529  (0.0295053); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.27s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 860.28
//
Query:       EPX71383.1  [L=144]
Description: ribosomal protein subunit L19 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.7e-28   96.8   0.1    1.2e-27   96.2   0.1    1.3  1  Ribosomal_L11    Ribosomal protein L11, RNA binding domain
    6.5e-23   80.3   0.7      1e-22   79.7   0.7    1.3  1  Ribosomal_L11_N  Ribosomal protein L11, N-terminal domain


Domain annotation for each model (and alignments):
>> Ribosomal_L11  Ribosomal protein L11, RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.2   0.1   1.3e-31   1.2e-27       2      70 .]      73     142 ..      72     142 .. 0.98

  Alignments for each domain:
  == domain 1  score: 96.2 bits;  conditional E-value: 1.3e-31
                    --SHHHHHHHHHTXSSXXSSTTTSXXEEEEHHHHHHHHHHHGGGHT.XS.SHHHHHHHHHHHHCTTTEEE CS
  Ribosomal_L11   2 tPptsylLkkaagiekgsgkpgketvGtvslkqvyeIAkiKksdln.aalsleaavksilgtArsmGikV 70 
                    tPpts+l+ k + iekgs++p++++ G++slk+vyeIAk K++d++ ++++l++++ks++gtA+smG++V
     EPX71383.1  73 TPPTSWLICKTLDIEKGSSSPKHDIKGQLSLKHVYEIAKLKSTDPTlKGTDLKSLCKSVIGTAKSMGVQV 142
                    9***********************99******************************************98 PP

>> Ribosomal_L11_N  Ribosomal protein L11, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.7   0.7   1.1e-26     1e-22       4      65 .]       5      67 ..       2      67 .. 0.96

  Alignments for each domain:
  == domain 1  score: 79.7 bits;  conditional E-value: 1.1e-26
  Ribosomal_L11_N  4 vvkvvklrvpaGkAtpaPplGpaLGplGlnikkfckefnkaTkd.kkglripVkitvyqdrsf 65
                     +++ vkl vpaGkA+p+Pp+GpaLG +G++  +fckefn++T    + ++ip+++tv + r+f
       EPX71383.1  5 KASLVKLVVPAGKAAPTPPIGPALGARGVKSIDFCKEFNARTVGyVPTVPIPCRVTVTPQRTF 67
                     5689**************************************988****************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       236  (0.013163); expected 358.6 (0.02)
Passed bias filter:                      219  (0.0122148); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 1046.13
//
Query:       EPX71384.1  [L=410]
Description: nicotinate phosphoribosyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-72  242.0   0.8      8e-72  241.7   0.8    1.1  1  NAPRTase    Nicotinate phosphoribosyltransferase (NAPRTase) f
    1.1e-33  116.3   0.3    2.2e-33  115.3   0.3    1.5  1  NAPRTase_N  Nicotinate phosphoribosyltransferase (NAPRTase) N


Domain annotation for each model (and alignments):
>> NAPRTase  Nicotinate phosphoribosyltransferase (NAPRTase) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  241.7   0.8   8.9e-76     8e-72       2     239 ..     166     407 ..     165     409 .. 0.97

  Alignments for each domain:
  == domain 1  score: 241.7 bits;  conditional E-value: 8.9e-76
                 SEEE-TSTTSSSHHHHHHHHHHHHH.....HHTTTEEEESBHHHHHHHT--B--HHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHCCHIIEEECH CS
    NAPRTase   2 klhDFGtRrrsslesqeivvkalkk.....ahlvnflGtdnvlaaakysikaaetsahealgkeqelsafrnnlkqfqkdaldlwvaiekgnlgiaLtd 95 
                  ++DFG+Rrr++ ++q+ ++++l k     + ++ flGt+nv++a+ky++++++t+ahe++++ +++++   n++++++ a ++wv++++++l+iaLtd
  EPX71384.1 166 YFTDFGSRRRRDHHAQDVMLQGLIKaqqdvEGPGRFLGTSNVHFAQKYDLEVSGTVAHEWYMGVAAITK---NYADANRIASEKWVQTFGKSLLIALTD 261
                 689*********************999999999***********************************9...*************************** PP

                 CCTHHHHHCCS-CC.....HHHSEEEEE-SS-HHHHHHHHHHHHHCTCTTTCCCSEEEEESS-SHHHHHHHHHHHHHTTCEEEEEESHHHHSSECTTCT CS
    NAPRTase  96 lvltdaflkdfrle.....akaylgvRpDSGdpvevieklaahygstlnskgytkrlifsDgldvekiieilealkkkgfniaFGiGtnltqdlnrdtl 189
                 +++td fl++f+++     a +++gvR+DSG ++e+iek+++hy+s+ +++++tk++++sD+l+v+++i+++++ kk g++ +FGiGtn+t+d+n+ ++
  EPX71384.1 262 TFSTDVFLRNFTANtpddlACVFHGVRQDSGVAEEYIEKIVNHYQSL-GIDPSTKMIVHSDALNVDRCISLHNYGKKLGIKSSFGIGTNFTSDFNH-VS 358
                 ************999999999**************************.************************************************.** PP

                 TTCCEEEEEEEEEEEEEETTEETTBGGSSCCGSBGSGHHHHHHHHHHCTT CS
    NAPRTase 190 efavkasalniviklvevnkdpvakisdrskkgrlgdkefvkllrtvfkn 239
                 ++  k++a+nivikl+++n+ +++kisd+++k++ gdk++v  ++t+++ 
  EPX71384.1 359 KPDQKSKAMNIVIKLHSANGAKAVKISDDIMKNT-GDKDAVVDVKTQLGL 407
                 **********************************.999999999998865 PP

>> NAPRTase_N  Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.3   0.3   2.5e-37   2.2e-33       1     125 []      10     133 ..      10     133 .. 0.98

  Alignments for each domain:
  == domain 1  score: 115.3 bits;  conditional E-value: 2.5e-37
  NAPRTase_N   1 LdtDlYkltmaqavfkkgpdvevvfelffRkkpfkgeyaivagleevieylenlrfteeeieyLkrklpyfkedfleyLrtfrfkpse.vaveeeevvf 98 
                 LdtDlYkltm qav++++p++ev++ +++R++++  ++++va+l++ i  l+nlr+ +ee ++L++++py+k++f+e++ ++ f+p++ v++e ++  +
  EPX71384.1  10 LDTDLYKLTMLQAVLEHYPTAEVSYVYTNRSPEMALNEEAVAWLKNGIYNLKNLRLLPEEEAWLRQRCPYLKDSFYEFMHSYAFEPKNvVSLEYDR--D 106
                 8***************************************************************************************88888886..9 PP

  NAPRTase_N  99 pgepeirveGpwieaillEtplLaivn 125
                  +++ i+++G w ++i++E+plLa+v+
  EPX71384.1 107 TKDLAITIKGLWKDTIFYEIPLLALVS 133
                 9************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (410 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       554  (0.0308997); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 2679.75
//
Query:       EPX71385.1  [L=97]
Description: hypothetical protein SOCG_01603 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.5e-08   33.4   0.1    8.2e-08   32.9   0.1    1.3  1  Complex1_LYR_2  Complex1_LYR-like


Domain annotation for each model (and alignments):
>> Complex1_LYR_2  Complex1_LYR-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.9   0.1   4.6e-12   8.2e-08       3      82 .]       6      96 ..       4      96 .. 0.80

  Alignments for each domain:
  == domain 1  score: 32.9 bits;  conditional E-value: 4.6e-12
  Complex1_LYR_2  3 sLYrrllrelre..........lppelrslgdayvraefrr.hk.hlknpeeialflknqreYaellerynpglkmteeekvrktanrvglq 82
                    +++r++lrelr+           +p++ +   + ++  fr+ ++ +l++ +e  ++l++   +  l ++y p  +m+e +k ++ anrvglq
      EPX71385.1  6 TVFRSILRELRQmntiyrslkdISPAQ-KTAIESLKMWFRNgSAsDLNKSKELLSLLSSGNKHELLFQQYHPLVGMSELDKAKLAANRVGLQ 96
                    578*******87666666554223333.44446677778885336999999***************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       622  (0.0346924); expected 358.6 (0.02)
Passed bias filter:                      510  (0.0284455); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 727.86
//
Query:       EPX71386.1  [L=1774]
Description: nucleoporin Nup189 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      4e-73  246.1   0.2    5.7e-73  245.6   0.2    1.2  1  Nup96           Nuclear protein 96
    1.6e-50  171.1   0.0    3.1e-50  170.2   0.0    1.5  1  Nucleoporin2    Nucleoporin autopeptidase
    4.7e-12   46.6 310.4     0.0003   21.6  32.2   11.3 10  Nucleoporin_FG  Nucleoporin FG repeat region


Domain annotation for each model (and alignments):
>> Nup96  Nuclear protein 96
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  245.6   0.2   9.6e-77   5.7e-73       1     291 [.    1325    1621 ..    1325    1622 .. 0.94

  Alignments for each domain:
  == domain 1  score: 245.6 bits;  conditional E-value: 9.6e-77
       Nup96    1 ekifalLsghqveeAcelAldagdlrLAtllsqaggddevrkdlqeQleeWreekvdseieeellkiyelLaGnvlvsegkk.kke....stinvle 92  
                  ekif lL+g+q++ Ace A+++++ rL+tl+ ++ +d ++++++++Ql++Wre++ +++i++ ++ i+elL+Gn++ +eg + ++e     ++ +++
  EPX71386.1 1325 EKIFILLTGNQISLACEEAVNSENNRLSTLIPLVDSDFDIQAEVKQQLNQWRERGDLAYINKYTRLIFELLSGNTDLAEGYGrSGEegyvPSVFISQ 1421
                  79******************************************************************************99776699********* PP

       Nup96   93 gldWkralglhlwYgisadasieeaveaYeealesgeet.akPlpwyleetskesskdakeekrerDllyhLLklyakktaslesvlePesvspspl 188 
                  +l+W+ a+g++lwY+++ +  i+eav+ Y e+l+  e++ ++P+         +++++ +      Dl++ LLk ya   asle++  Pes +++pl
  EPX71386.1 1422 ELSWLCAFGMKLWYNTDIN--IAEAVSLYMESLKMYEKElRRPTV--------STESNGE---VC-DLMFVLLKAYAV-GASLEELTLPESAKSHPL 1503
                  ******************9..*************99999889999........1222233...34.***********8.9***************** PP

       Nup96  189 dyrlsWhLyqvLs..................aasaeaeklssakadaltlsfasqLeaaglwewAvfVllhledparRekavkellarhasleeesd 267 
                  dyr+ W+L  +Ls                  +      k +s +ad+ltls+a qLe++g+w+wA+fVllh+e+ ++R ++vk++lar+++    ++
  EPX71386.1 1504 DYRVVWQLAIFLSrarnicdfsdrdamdeviDEGGMHFKPQSVRADNLTLSLACQLESMGYWQWALFVLLHVENVETRISSVKSCLARNVTM---DS 1597
                  ****************************98733345566788999***********************************************...88 PP

       Nup96  268 dakeeflveklkiPeaWiheAkAl 291 
                  ++++e lv++l iP++WiheAkAl
  EPX71386.1 1598 TDDDEKLVKELLIPNNWIHEAKAL 1621
                  999999*****************8 PP

>> Nucleoporin2  Nucleoporin autopeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  170.2   0.0   5.2e-54   3.1e-50       2     149 .]     810     955 ..     809     955 .. 0.98

  Alignments for each domain:
  == domain 1  score: 170.2 bits;  conditional E-value: 5.2e-54
                   TTEEEES-HHHHHTS-HHHHTSBSS-EEEETTTEEEEESS-B--GGG.-HHHHBTTTEEEETTEEEESSSCCC.---TTSTT-S-EEEEESS---B- CS
  Nucleoporin2   2 gdYytePsleeLkkmseeelsavkdFtvgrkgvGsveFlepvdlssl.dldeiagkivklekkevtVYpdeekekppvGegLNkpaeitLenvwpkd 97 
                   ++Y+++Ps+eeL k+ +++ls+v++F vgr g+G+v+Fl+pvdl+++ ++++i  ++v +ekk ++VYp+e +  ppvGegLN+pa itLen wp++
    EPX71386.1 810 DGYWMKPSVEELVKYPKDKLSSVHQFCVGRAGYGQVSFLKPVDLTKFeKIEDIPVNVVLFEKKICSVYPEEGS-SPPVGEGLNVPAIITLENAWPVS 905
                   68*********************************************89**********************55.*********************** PP

                   TTT--B---TT-HHHHHHHHHHHH-SSSEEEEEETTTTEEEEEES--XXXXX CS
  Nucleoporin2  98 katkeeikdkskarvkkhieklkkvegteFvsydpetgtwtfkVeHFsrYgl 149
                   ++t+e+ik+++++r+ +h+++l+++++teF++++  +g+wtfkV+HFs+Ygl
    EPX71386.1 906 RETREPIKNANHPRYAQHLRRLQNIKETEFIDFN--DGKWTFKVQHFSKYGL 955
                   *********************************8..89************97 PP

>> Nucleoporin_FG  Nucleoporin FG repeat region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -8.0  65.0         3   1.8e+04       4      91 .]      18     114 ..       1     135 [. 0.49
   2 !   10.8  35.7   0.00012      0.71       2      83 ..     100     176 ..      96     199 .. 0.71
   3 !   10.8  23.9   0.00012      0.69      10      77 ..     222     284 ..     218     286 .. 0.81
   4 !   19.0  43.9   3.3e-07     0.002       1      91 []     285     381 ..     285     381 .. 0.83
   5 ?  -18.1  57.2         3   1.8e+04       3      81 ..     344     450 ..     342     465 .. 0.54
   6 ?   -0.4  41.5      0.35   2.1e+03       9      85 ..     437     517 ..     417     521 .. 0.61
   7 !   21.6  32.2     5e-08    0.0003       1      90 [.     507     589 ..     507     590 .. 0.78
   8 !   21.2  20.5   6.7e-08    0.0004      22      91 .]     567     637 ..     564     637 .. 0.80
   9 !    8.8  20.9   0.00047       2.8       8      84 ..     592     646 ..     590     697 .. 0.55
  10 ?   -3.2   2.3       2.7   1.6e+04      53      78 ..     988    1014 ..     967    1035 .. 0.56

  Alignments for each domain:
  == domain 1  score: -8.0 bits;  conditional E-value: 3
  Nucleoporin_FG   4 GaaatstsgglFGststtatstgglFG...asstatatasggglfgatsqtaasgglFGstnattqtta.........tgglFGstaataqq... 83 
                     G ++++++gglFGs++++  ++++lFG   +++    +++++ lfg+    ++++glFG+ n ++++t          +gglFG+++a a     
      EPX71386.1  18 G-QNNQQTGGLFGSNTNN--TGNSLFGsqnNNAGGFGQSTTQPLFGS----NTGSGLFGNRNPAPASTGtgfgmnsgtGGGLFGQSSAPAFGgtn 105
                     5.5555555555555555..444444411111111111111122222....34444444444444333334444444455555555555444554 PP

  Nucleoporin_FG  84 .ttsgglFG 91 
                      +++gglFG
      EPX71386.1 106 tSSGGGLFG 114
                     444444555 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00012
  Nucleoporin_FG   2 lFGaaatstsgglFGststt.atstgglFGasstatatasggglfgat........sqtaasgglFGstnattqttatgglFGstaataqq 83 
                     +FG ++ts++gglFG++s + a+stg++F               fg++        +q++++gglFGs+++ ++++ +++ FG+ ++++ +
      EPX71386.1 100 AFGGTNTSSGGGLFGNASGAsAPSTGSAFS--------------FGSNntgttgfgTQPSSGGGLFGSASTGQAPAFGSSGFGAGSTNTIN 176
                     466666666667777766666444444444..............33333333333349***************9998******98888754 PP

  == domain 3  score: 10.8 bits;  conditional E-value: 0.00012
  Nucleoporin_FG  10 tsgglFGststtatstgglFGasstatatasggglfgat.sqtaasgglFGstnattqttatgglFGst 77 
                     ++g  FG+++++ tst ++FG s++   ++++g  fg+t + t++s + FGs+n++++t  +gglFG+ 
      EPX71386.1 222 NQGRRFGNPTNA-TSTPSTFG-STPGFGSSTTG--FGQTaTPTSNSITPFGSSNTNANT--GGGLFGGG 284
                     567789999999.99999999.67777777776..999978888888999999998887..89999975 PP

  == domain 4  score: 19.0 bits;  conditional E-value: 3.3e-07
  Nucleoporin_FG   1 glFGaaatstsgglFGststtatstgglFGasstatatasggglfgat...sqtaasgglFGstnattqtta.tgglFGstaataqq.....tts 86 
                     ++FG a+++++++ FG+++t+ t +gglFG+s++a++t+s+g lfg++   s+  +++++FG  ++t+++ a  gglFGs+a++ ++      t+
      EPX71386.1 285 SAFG-ASNPSTTSGFGANATN-TGGGGLFGQSNQAATTPSSG-LFGGAgggSTFGQQKPAFGFGANTSTGGAgAGGLFGSSASNPSTntagtGTG 376
                     58**.99**************.9*******777777777776.**99999977777777777777777777779*****9988887788898888 PP

  Nucleoporin_FG  87 gglFG 91 
                     gglFG
      EPX71386.1 377 GGLFG 381
                     88**9 PP

  == domain 5  score: -18.1 bits;  conditional E-value: 3
  Nucleoporin_FG   3 FGaaatstsg....glFGststt.......atstgglFGasstatatasggglfgat......sqtaasgglFGstnattqtta........... 69 
                     FG a+tst+g    glFGs++++       + ++gglFG+++    t ++++ fg++      ++++++gglFG  n+++++t+           
      EPX71386.1 344 FG-ANTSTGGagagGLFGSSASNpstntagTGTGGGLFGNTGGGFGTGNANTGFGSSapanppASNPTGGGLFGFGNNAASGTNtsapgssslgs 437
                     55.33333323344677766666666666555566677755555555544456666666666666677777776655555555455666666665 PP

  Nucleoporin_FG  70 tggl.FGstaata 81 
                     ++g+ FG+++a++
      EPX71386.1 438 GSGFsFGANNAAS 450
                     3333466555544 PP

  == domain 6  score: -0.4 bits;  conditional E-value: 0.35
  Nucleoporin_FG   9 stsgglFGststtatstgglFG....asstatatasggglfgatsqtaasgglFGstnattqtta.tgglFGstaataqqtt 85 
                     s sg  FG+++++++++g  FG    + + +ta+as+g +fg+  ++++++++FG+t+++++++  +gglFG+  a+++++t
      EPX71386.1 437 SGSGFSFGANNAASKPSGFGFGsntgSGTGTTAPASSGFSFGQ-PSSTTPKPAFGATSTAPPAKPaGGGLFGGFGAASTPST 517
                     3455677777777777777777665433333444444457777.67777777777777777666677777777777766544 PP

  == domain 7  score: 21.6 bits;  conditional E-value: 5e-08
  Nucleoporin_FG   1 glFGaaatstsgglFGststtatstgglFGasstatatasggglfgatsqtaasgglFGstnattqtta.tgglFGstaataqqttsgglF 90 
                     g+FG aa+++s+ +  ++++ + stgglFG    +t + +ggglfg+t++++ ++glFG++++ +++ + +ggl Gs ++t+ +++++glF
      EPX71386.1 507 GGFG-AASTPSTATNNTAPN-TGSTGGLFG----NTGS-TGGGLFGNTNTNTGGSGLFGNNSTLNNPPStGGGLLGSGTNTS-TAPGTGLF 589
                     5799.545544444444444.59*******....4445.5556********************99998889*****888887.68999999 PP

  == domain 8  score: 21.2 bits;  conditional E-value: 6.7e-08
  Nucleoporin_FG  22 atstgglFGasstatatasggglfgatsqtaasgglFGstnattqtta..tgglFGstaataqq...ttsgglFG 91 
                     ++++ggl G s+t+t+ta g+glf +   +++++glFGs+n+ +q++a  ++glFGs++ ++q+     ++glFG
      EPX71386.1 567 PSTGGGLLG-SGTNTSTAPGTGLFSK---PSTGTGLFGSNNTLQQPSAtgSSGLFGSSNMNNQTqpaGLGSGLFG 637
                     57899****.666666666667**76...99*************99999999****9998887765555566998 PP

  == domain 9  score: 8.8 bits;  conditional E-value: 0.00047
  Nucleoporin_FG   8 tstsgglFGststt....atstgglFGasstatatasggglfgatsqtaasgglFGstnattqtta...tgglFGstaataqqt 84 
                     +st++glFGs++t     at +                             +glFGs+n ++qt+    ++glFG+t++  qq+
      EPX71386.1 592 PSTGTGLFGSNNTLqqpsATGS-----------------------------SGLFGSSNMNNQTQPaglGSGLFGGTSQIGQQS 646
                     3334444444444333333333.............................445555554444444445555555444444332 PP

  == domain 10  score: -3.2 bits;  conditional E-value: 2.7
  Nucleoporin_FG   53 asgglFGstnattqtta.tgglFGsta 78  
                      ++++  Gs++++tq t  t g F  ++
      EPX71386.1  988 EKSSYQGSQSNKTQLTHnTPGSFPPNN 1014
                      444445555555554444555554333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1774 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       622  (0.0346924); expected 358.6 (0.02)
Passed bias filter:                      290  (0.0161749); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.00u 0.30s 00:00:01.30 Elapsed: 00:00:00.48
# Mc/sec: 11051.19
//
Query:       EPX71387.1  [L=1727]
Description: medial ring protein Alm1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.3e-08   33.7  14.5    3.3e-08   33.7  14.5   17.0 17  TPR_MLP1_2    TPR/MLP1/MLP2-like protein
     0.0026   17.6  35.8     0.0026   17.6  35.8   14.1 12  KASH_CCD      Coiled-coil region of CCDC155 or KASH
     0.0039   17.0  28.2     0.0039   17.0  28.2   11.1  8  ERM           Ezrin/radixin/moesin family
     0.0053   16.8  13.3     0.0053   16.8  13.3   18.3 19  ADIP          Afadin- and alpha -actinin-Binding
  ------ inclusion threshold ------
      0.078   13.5   0.2      0.078   13.5   0.2    5.2  5  Tox-REase-5   Restriction endonuclease fold toxin 5


Domain annotation for each model (and alignments):
>> TPR_MLP1_2  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0  21.5     0.056     2e+02      32     124 ..      62     154 ..      39     159 .. 0.80
   2 ?   -5.4  22.0         5   1.8e+04      10     114 ..     149     260 ..     140     263 .. 0.60
   3 ?   -1.5  22.3      0.66   2.4e+03       3     128 ..     205     334 ..     203     335 .. 0.81
   4 ?   -5.1  14.6         5   1.8e+04      53      86 ..     326     359 ..     281     370 .. 0.37
   5 ?    3.1   2.5     0.026        93       6      89 ..     404     487 ..     400     501 .. 0.85
   6 ?    3.1  14.8     0.027        95      12     118 ..     569     680 ..     558     684 .. 0.76
   7 ?    3.8  12.0     0.016        57       4     103 ..     618     718 ..     616     731 .. 0.87
   8 ?    0.6   7.0      0.15   5.4e+02      18      81 ..     668     731 ..     665     767 .. 0.57
   9 ?   -1.8  20.4      0.86   3.1e+03       5     109 ..     774     878 ..     770     906 .. 0.79
  10 ?   -4.4  21.0         5   1.8e+04       5     115 ..     876     991 ..     872     993 .. 0.43
  11 ?    0.3  17.8      0.19   6.9e+02       2      84 ..     927     999 ..     921    1013 .. 0.66
  12 !   33.7  14.5   9.1e-12   3.3e-08       2      92 ..    1019    1101 ..    1018    1137 .. 0.78
  13 ?    0.9  18.4      0.12   4.4e+02       9     117 ..    1231    1341 ..    1225    1344 .. 0.87
  14 !    7.6  14.3     0.001       3.7       2      85 ..    1342    1426 ..    1341    1428 .. 0.88
  15 !   12.2  13.7   3.9e-05      0.14      48     127 ..    1455    1534 ..    1434    1536 .. 0.88
  16 ?   -0.4  10.5      0.31   1.1e+03      55     107 ..    1522    1574 ..    1519    1581 .. 0.62
  17 ?   -4.1   7.2       4.5   1.6e+04      71     117 ..    1630    1666 ..    1610    1670 .. 0.43

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.056
  TPR_MLP1_2  32 ekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeelekelselekriedlneqNklLhd 124
                 e +++ +++     e++l   +e+vk+ q+  eel++  + ++e+++  +s  ++ +e+++s+  +k+e+ ++++++e+++ + ++  ++Lh+
  EPX71387.1  62 EHKQNVTNRRVLHLEEQLSSRNETVKQFQEKTEELQKDVDALREANSLIQSQVNKQSEEKNSLVIEKQEMNSRIADMERKLVESQNLLRTLHE 154
                 333334445555679999999999*****99999999999999999*********************************99999999999997 PP

  == domain 2  score: -5.4 bits;  conditional E-value: 5
  TPR_MLP1_2  10 ikslkeekeeaeaklqklqedlekqaeiakeaq.....qkYere..lvkhaedvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeel 101
                 + +l eek++ e+ +++lq+++++++e  ++       +  ++e  l+++++ v +++ l +e  ++ +e+++ +++ + +++++   + s +e ++++
  EPX71387.1 149 LRTLHEEKQKGEDSVRNLQQQMREMEENQRNFTlnqssKTLKEElyLQEKNALVSDIKLLQDETRNMSEELKSSRESQNILQEQVTSLKVSNSELQKKY 247
                 444444444444444444444444444333322000113333441156666778888888888888888888888888888888888888888888888 PP

  TPR_MLP1_2 102 ekelselekried 114
                  k + e+++++ d
  EPX71387.1 248 AKVVHESQTKLRD 260
                 8888888888766 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 0.66
  TPR_MLP1_2   3 lksleeeikslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvke....lqalreelnelkaeiaelkaeaesakaeleeseesweeq 97 
                 +k l++e  +++ee +++++ ++ lqe++++ + + +e q+kY++ + +  + +++     +++  e+++ ++  ++l++e+e+ +      e++ +e 
  EPX71387.1 205 IKLLQDETRNMSEELKSSRESQNILQEQVTSLKVSNSELQKKYAKVVHESQTKLRDegsgTSTTAMEVDNQNDVFNDLQKELEAQQRLTTLWESQCSEL 303
                 6889*****************************************998877666542222555556667777778888888888888888888888888 PP

  TPR_MLP1_2  98 keelekelselekriedln.eqNklLhdQlEs 128
                 k++l k l+  ++  edl+ + N+ L +QlE+
  EPX71387.1 304 KSQLNKSLN-YQSTSEDLDtSSNESLKEQLET 334
                 888888886.566677776268********97 PP

  == domain 4  score: -5.1 bits;  conditional E-value: 5
  TPR_MLP1_2  53 aedvkelqalreelnelkaeiaelkaeaesakae 86 
                 ++  ++l++ +++l+ ++++i++l++e+++  +e
  EPX71387.1 326 ESLKEQLETSKNQLKVANETINNLQSEVDKCASE 359
                 1112223333333333333333333333333333 PP

  == domain 5  score: 3.1 bits;  conditional E-value: 0.026
  TPR_MLP1_2   6 leeeikslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesakaelee 89 
                 l++ + +l+++ ++a++k+     ++++   i ++  +  +r  v   + +++l++ +e +n++k+e + lk + e+++  l +
  EPX71387.1 404 LQQAVLNLQQQLDRANDKICWFFYQIKQRVPIFQQQREEIARNNVYMIDMSEQLSTSKEIINHTKQEFEGLKLQHEETHLRLMA 487
                 667777788888888888888888889999999999999999999999999***********************9998877765 PP

  == domain 6  score: 3.1 bits;  conditional E-value: 0.027
  TPR_MLP1_2  12 slkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaed....vkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeelekel. 105
                 +l+ +k+++e +l+   e+l+ q+e  ++a q   +el + ++     v e + l+e ln +k+++a+  ++  s+++  +++   +e+q e++++e+ 
  EPX71387.1 569 NLEIQKKASEYQLSIRTEELNDQHEHSTNALQ---NELKLANTKmenfVHERSVLKEMLNMYKEKLAQSVSQKTSTENGPSQAVDDIEKQLEMYRSEMv 664
                 677889999999*************9999977...5555555550001556678888889999999999999999999999999999999999998872 PP

  TPR_MLP1_2 106 ...selekriedlneq 118
                    ++l kri+dl +q
  EPX71387.1 665 aanESLSKRINDLISQ 680
                 2224556667776655 PP

  == domain 7  score: 3.8 bits;  conditional E-value: 0.016
  TPR_MLP1_2   4 ksleeeikslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaed.vkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeel 101
                 + l+e ++++ke+ +++ ++ ++ ++   +  +  ++  + Y +e+v  +e  +k +++l ++l+++++e++++k + +   + l+ s+++ ++ ++e+
  EPX71387.1 618 SVLKEMLNMYKEKLAQSVSQKTSTENGPSQAVDDIEKQLEMYRSEMVAANESlSKRINDLISQLEQTRKEANKVKYREQLSLQRLNVSRQNVDSLRKEM 716
                 678999999*************************************9877652689*********************9999999999999999988888 PP

  TPR_MLP1_2 102 ek 103
                  +
  EPX71387.1 717 NE 718
                 64 PP

  == domain 8  score: 0.6 bits;  conditional E-value: 0.15
  TPR_MLP1_2  18 eeaeaklqklqedlekqaeiakeaqqkYerelvkh..aedvkelqalreelnelkaeiaelkaeae 81 
                 e++ ++++ l ++le+ +++a++   kY ++l ++  +   +++ +lr+e+nelk+    l++ ++
  EPX71387.1 668 ESLSKRINDLISQLEQTRKEANKV--KYREQLSLQrlNVSRQNVDSLRKEMNELKSLNGYLQEVLN 731
                 455566666666666666666665..5555554441033445666666666666655544444443 PP

  == domain 9  score: -1.8 bits;  conditional E-value: 0.86
  TPR_MLP1_2   5 sleeeikslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeelek 103
                 +l++e ++l++e e++++ +++lq+ l++q++i +  + ++e+   + +e++++lq+ +++l++  + ++el+++ +    +l ++  + e +k+e  k
  EPX71387.1 774 RLTSENDNLLAERERLTNLVSNLQSLLNEQQRIFSLNKISFETKNKELEEAINTLQDSNQKLENSLQLANELTNAKDIDIDSLRQKLDEVEATKQEHLK 872
                 7999**********************************************************8888888888887766666666665555555555444 PP

  TPR_MLP1_2 104 elsele 109
                  +++le
  EPX71387.1 873 VKDSLE 878
                 433333 PP

  == domain 10  score: -4.4 bits;  conditional E-value: 5
  TPR_MLP1_2   5 sleeeikslkeekeeaeaklqklqedlekqae.iakeaqqkYerel....vkhaedvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqk 98 
                 sle e   l++++++  +k+++lq++l  q++ +a+e +   ++ +    +++++  ++l+a ++ +++l++  + +++ +e+++ e +  + s ++q 
  EPX71387.1 876 SLELENRGLQSRISSEINKVEELQRKLSHQQSmSASERETELSSVVfdlkTENSSLQTSLNASNDNIKRLEEASRLAEETLEKLQREYQSLQLSTSKQL 974
                 666666666666666666666666666544431344444444443311111222222333333333344444444444444444444444444444444 PP

  TPR_MLP1_2  99 eelekelselekriedl 115
                 +e  ++++ lekr ++l
  EPX71387.1 975 KENTENIKALEKRSNEL 991
                 44444455555555444 PP

  == domain 11  score: 0.3 bits;  conditional E-value: 0.19
  TPR_MLP1_2   2 elksleeeikslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesak 84 
                 e +sl++ +++ +++++++e++ + ++e lek +++++  q + +++l ++ e++k+l++  +el+e           + +a+
  EPX71387.1 927 ENSSLQTSLNASNDNIKRLEEASRLAEETLEKLQREYQSLQLSTSKQLKENTENIKALEKRSNELEEK----------LIKAQ 999
                 45677777777777777777777777777777777777777777777777777777777777776443..........22222 PP

  == domain 12  score: 33.7 bits;  conditional E-value: 9.1e-12
  TPR_MLP1_2    2 elksleeeikslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesakaeleesee 92  
                  e ++l++ei+++++ ++++ +k+++lq+++ k +e +++a++ Ye+el+ ha+++ +lq+lr+e++++ ++ +++ +  es         +
  EPX71387.1 1019 ENEQLTTEITDARNLEKKLLQKQRSLQQEVVKLSEDCRKAHDAYEKELLRHANAMSSLQKLRTEYESVLERTSNVSEPTES--------NN 1101
                  6789**************************************************************998877776655544........34 PP

  == domain 13  score: 0.9 bits;  conditional E-value: 0.12
  TPR_MLP1_2    9 eikslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesakaeleesees..weeqkeelek 103 
                   +k l+++++ +++k++++ + ++k +e+++  +++ e +l++  e  +e+++++e   +++++ + l++ +++   +l+e++ s   +e  ++ ek
  EPX71387.1 1231 MVKLLNDSNKFLRKKEEEHNDIINKLQERVNSLERDLEAQLNHCRELENEVSSVKEITRRTEEDNQRLQQHNQQILYSLKENKVSdsSAEASKADEK 1327
                  5677888999999*******************************************************************99975115566677788 PP

  TPR_MLP1_2  104 elselekriedlne 117 
                   l+el++ ie l++
  EPX71387.1 1328 LLDELRQNIEKLTT 1341
                  89999999998875 PP

  == domain 14  score: 7.6 bits;  conditional E-value: 0.001
  TPR_MLP1_2    2 elksleeeikslkeekeeaeaklqklqedlekqaeiakeaq.qkYerelvkhaedvkelqalreelnelkaeiaelkaeaesaka 85  
                  el+s +e+i++l++ek++a +++++l    ++ a+ ++    q  ++ l kh++  ++l++  +el++  +e ++l+ ++++ ++
  EPX71387.1 1342 ELNSTKETIEKLESEKTDASNTIEQLTARSKTVAAAWRSKYdQLVAKSLEKHNQVRQQLSQKTSELESKIQETNTLRGKLQKYEE 1426
                  7999*********************************976505568889999999999999999999999999999999888765 PP

  == domain 15  score: 12.2 bits;  conditional E-value: 3.9e-05
  TPR_MLP1_2   48 elvkhaedvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeelekelselekriedlneqNklLhdQlE 127 
                    +   e++ el a+++e+ +l+++i +l +e  + +a +e+ +e+ e++ ++l++ + +l++ri+   ++N+ + +Q+ 
  EPX71387.1 1455 TQQRLVEATAELDATKKEALSLRERIGQLDKEKSTQSAGCETTKEEVEKKNQALKQAVLKLRSRITQEVQKNDAMSKQFK 1534
                  5555668999**************************************************************99999985 PP

  == domain 16  score: -0.4 bits;  conditional E-value: 0.31
  TPR_MLP1_2   55 dvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeelekelse 107 
                  +v++  a+ ++++ l+ ++++l+++ es +++  +se+s ++ +++  + l+e
  EPX71387.1 1522 EVQKNDAMSKQFKALEVQLEKLRESSESQTQNAHNSESSKTSDEQKWNSLLKE 1574
                  56666667777777777777777777777777777766666666655544444 PP

  == domain 17  score: -4.1 bits;  conditional E-value: 4.5
  TPR_MLP1_2   71 aeiaelkaeaesakaeleeseesweeqkeelekelselekriedlne 117 
                   +i++l++e+e             + + ++lek+l+++++++++ n+
  EPX71387.1 1630 RQISNLRTELE----------MRSKLKLSMLEKNLAKVRAQLQESNA 1666
                  23333333332..........22223333344444444444444333 PP

>> KASH_CCD  Coiled-coil region of CCDC155 or KASH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6  24.0       2.3   8.3e+03      48     183 ..      50     158 ..      39     163 .. 0.46
   2 ?   -0.6  31.5      0.29     1e+03      13     159 ..     152     306 ..     147     318 .. 0.83
   3 ?   -0.7   6.5      0.29     1e+03      11      56 ..     318     364 ..     314     370 .. 0.78
   4 ?   -0.9   6.9      0.34   1.2e+03      63     110 ..     465     512 ..     396     553 .. 0.81
   5 ?  -11.6  23.2         5   1.8e+04      39     184 ..     557     702 ..     546     705 .. 0.63
   6 !    6.1  27.0    0.0024       8.7      15     189 ..     665     840 ..     662     840 .. 0.83
   7 !    5.8   9.1     0.003        11     116     189 ..     816     889 ..     807     892 .. 0.89
   8 !   17.6  35.8   7.3e-07    0.0026       4     175 ..     915    1088 ..     912    1092 .. 0.88
   9 ?    0.7   1.7      0.11   4.1e+02     126     175 ..    1159    1211 ..    1117    1219 .. 0.63
  10 ?   -6.3  37.8         5   1.8e+04      18     190 ..    1233    1413 ..    1224    1414 .. 0.78
  11 ?   -6.3  22.2         5   1.8e+04      64     153 ..    1468    1561 ..    1434    1581 .. 0.55
  12 ?   -6.8  10.0         5   1.8e+04      35      94 ..    1622    1679 ..    1607    1704 .. 0.75

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 2.3
    KASH_CCD  48 LkkklkstQqalqkaklleeEleelkalvkeleEkrarlkaqnkqlekenqsLiakiesLqeenikllaekdelkkklkeLlkekaeLkkqlheleell 146
                 Lk+++                                  + +++  ++   +L++++ s +e  ++ +  ++el+k +  L + ++ +++q+    +  
  EPX71387.1  50 LKEQMVLQEVN---------------------------SEHKQNVTNRRVLHLEEQLSSRNETVKQFQEKTEELQKDVDALREANSLIQSQVN---KQS 118
                 33333332222...........................2223333344444555555555555555555555555555555555555555553...233 PP

    KASH_CCD 147 aekealleek...tkqieeLkltieEyssiieeLraeksr 183
                  ek++l++ek   + +i +++  ++E +    +L  ek++
  EPX71387.1 119 EEKNSLVIEKqemNSRIADMERKLVESQNLLRTLHEEKQK 158
                 3344444333111345556666666666666666666665 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.29
    KASH_CCD  13 LqlnNkkLaeenskLkkavetaeet..nakLteeieeLkkklkstQq..alqkaklleeEleelkalvkeleEkrarlkaqnkqlekenqsLiakies. 106
                 L+   +k ++ ++ L++++  +ee+  n  L +  + Lk+ l    +  ++   kll++E  ++ + +k++ E+++ l+ q   l+  n  L++k ++ 
  EPX71387.1 152 LHEEKQKGEDSVRNLQQQMREMEENqrNFTLNQSSKTLKEELYLQEKnaLVSDIKLLQDETRNMSEELKSSRESQNILQEQVTSLKVSNSELQKKYAKv 250
                 66778899999************9633778999999****98766551156789****************************************99872 PP

    KASH_CCD 107 LqeenikllaekdelkkklkeLlkeka...eLkkqlheleellaekealleektkq 159
                   e  +kl+ e +   +   e  ++++   +L+k+l   ++l++  e+  +e + q
  EPX71387.1 251 VHESQTKLRDEGSGTSTTAMEVDNQNDvfnDLQKELEAQQRLTTLWESQCSELKSQ 306
                 58899*******99999999988776444489999999999988888777765544 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.29
    KASH_CCD  11 adLql.nNkkLaeenskLkkavetaeetnakLteeieeLkkklkstQ 56 
                 +dL + +N +L+e+ +  k+++  a+et + L  e+ +    l++t 
  EPX71387.1 318 EDLDTsSNESLKEQLETSKNQLKVANETINNLQSEVDKCASELQVTK 364
                 67764268999999999999999999999999999988888888775 PP

  == domain 4  score: -0.9 bits;  conditional E-value: 0.34
    KASH_CCD  63 klleeEleelkalvkeleEkrarlkaqnkqlekenqsLiakiesLqee 110
                    ++E e lk   +e+  +    + q + l +e q+L  +++++q  
  EPX71387.1 465 NHTKQEFEGLKLQHEETHLRLMATQVQCRDLTREVQCLLLQLDHMQGA 512
                 345788888888888888888888999999***********9999965 PP

  == domain 5  score: -11.6 bits;  conditional E-value: 5
    KASH_CCD  39 akLteeieeLkkklkstQqalqkakll.eeEleelka.lvkeleEkrarlkaqnkqlekenqsLiakiesLqeenikllaekdelkkklkeLlkekaeL 135
                  +L e+i +L   l +  +a++ + ++  eEl++  + +++ l+ + + ++++ ++   e+  L++ ++  +e++ ++ ++k   ++     ++  +++
  EPX71387.1 557 LQLRENIRALECNLEIQKKASEYQLSIrTEELNDQHEhSTNALQNELKLANTKMENFVHERSVLKEMLNMYKEKLAQSVSQKTSTENG---PSQAVDDI 652
                 5788888888888888888888776662477777655144555655555566666666777777777666666666665555554444...44555566 PP

    KASH_CCD 136 kkqlhelee.llaekealleektkqieeLkltieEyssiieeLraeksrL 184
                  kql  + + ++a  e+l +  +  i +L++t +E +++    ++  +rL
  EPX71387.1 653 EKQLEMYRSeMVAANESLSKRINDLISQLEQTRKEANKVKYREQLSLQRL 702
                 66666665414455555555556678888888888888766555555555 PP

  == domain 6  score: 6.1 bits;  conditional E-value: 0.0024
    KASH_CCD  15 lnNkkLaeenskLkkavetae.etnakLteeieeLkkklkstQqalqkaklleeEleelkalvkeleEkrarlkaqnkqlekenqsLiakiesLqeeni 112
                 ++N +L++  + L  ++e++  e+n+    e   L++ l +   + q+  +l +E++elk l   l+E  +r   ++ ++  e+ +L++    ++ e+ 
  EPX71387.1 665 AANESLSKRINDLISQLEQTRkEANKVKYREQLSLQR-LNV---SRQNVDSLRKEMNELKSLNGYLQEVLNRQDSNAGRIYEEHIQLKSLCSRMNSEIA 759
                 6899999999999999987751555544556665543.444...44567799*********************************************** PP

    KASH_CCD 113 kllaekdelkkklkeLlkekaeLkkqlheleellaekealleektkqie....eLkltieEyssiieeLraeksrLeeqlq 189
                  l++ek+   k  + L++e+++L  +   l +l+++ ++ll+e+++       ++++  +E++ +i++L+   ++Le+ lq
  EPX71387.1 760 NLTSEKEVFGKIQQRLTSENDNLLAERERLTNLVSNLQSLLNEQQRIFSlnkiSFETKNKELEEAINTLQDSNQKLENSLQ 840
                 *****************************************99876433111133445679999************99875 PP

  == domain 7  score: 5.8 bits;  conditional E-value: 0.003
    KASH_CCD 116 aekdelkkklkeLlkekaeLkkqlheleellaekealleektkqieeLkltieEyssiieeLraeksrLeeqlq 189
                 + + el++ ++ L +++++L + l+ ++el++ k+  +    ++ +e+++t +E  ++ + L +e + L+++++
  EPX71387.1 816 TKNKELEEAINTLQDSNQKLENSLQLANELTNAKDIDIDSLRQKLDEVEATKQEHLKVKDSLELENRGLQSRIS 889
                 4566788999999999********9*****************************************99999876 PP

  == domain 8  score: 17.6 bits;  conditional E-value: 7.3e-07
    KASH_CCD    4 sdlistvadLqlnNkkLaeenskLkkavetaeetnakLteeieeLkkklkstQqalqkaklleeEleelkalvkeleEkrarlkaqnkqlekenqsL 100 
                   +l s v dL++ N +L+   +     +   ee++    e +e+L++  +s+Q +    k l+e  e++kal k+++E +++l   ++q   +n++ 
  EPX71387.1  915 TELSSVVFDLKTENSSLQTSLNASNDNIKRLEEASRLAEETLEKLQREYQSLQLS--TSKQLKENTENIKALEKRSNELEEKLIKAQQQHHNDNEQK 1009
                  5788999*************************987655555899*********66..5689************************************ PP

    KASH_CCD  101 iakiesLqeenikllaekdelkkklkeLlkekaeLkkqlhe....leellaekealleektkqieeLkltieEyssiie 175 
                    +i  L  en++l++e+   ++  k+Ll+++ +L++++ +    + +     e++l  + + + +L+    Ey+s+ e
  EPX71387.1 1010 DGRISVLIKENEQLTTEITDARNLEKKLLQKQRSLQQEVVKlsedCRKAHDAYEKELLRHANAMSSLQKLRTEYESVLE 1088
                  **************************************9861111445555667889999999999999999**99988 PP

  == domain 9  score: 0.7 bits;  conditional E-value: 0.11
    KASH_CCD  126 keLlkekaeLkkqlheleellaekealleekt...kqieeLkltieEyssiie 175 
                    L++ +  +k+   e+  l+++ke +l+e +   k +e+ +++i E++s+ e
  EPX71387.1 1159 LSLSDLQTYVKQMFNEVSILTCQKELTLIENKrlkKLVEQSNQIIIEFQSTQE 1211
                  35667777777888888899999998887765111346666777777777665 PP

  == domain 10  score: -6.3 bits;  conditional E-value: 5
    KASH_CCD   18 kkLaeenskLkkavetaeetnakLteeieeLkkklkstQqalqkaklleeEleelkalvkeleEkrarlkaqnkql...ekenqsLiak........ 103 
                  k L++ n+ L+k+ e  ++  +kL e ++ L + l      l++ + le+E+  +k++++++eE ++rl+++n+q+    ken+   +         
  EPX71387.1 1233 KLLNDSNKFLRKKEEEHNDIINKLQERVNSLERDLEA---QLNHCRELENEVSSVKEITRRTEEDNQRLQQHNQQIlysLKENKVSDSSaeaskade 1326
                  668888999999999999999**********999975...588999****************************97444477764432211112222 PP

    KASH_CCD  104 ..iesLqeenikllaekdelkkklkeLlkekaeLkkqlheleellaekealleektkqieeL.kltieEyssiieeLraeksrLeeqlqq 190 
                    +++L ++++kl++e +  k+ +++L +ek +  + +   e+l+a   +++     + ++L + ++e  +++ ++L +  s Le+++q+
  EPX71387.1 1327 klLDELRQNIEKLTTELNSTKETIEKLESEKTDASNTI---EQLTARSKTVAAAWRSKYDQLvAKSLEKHNQVRQQLSQKTSELESKIQE 1413
                  33678999999999999999999999999998877766...7887776666666666666661566777788999999999999999986 PP

  == domain 11  score: -6.3 bits;  conditional E-value: 5
    KASH_CCD   64 lleeEleelkalvkeleE....krarlkaqnkqlekenqsLiakiesLqeenikllaekdelkkklkeLlkekaeLkkqlheleellaekeall 153 
                  + ++E   l++ + +l+     + a  ++ ++++ek nq L++ + +L  ++++  + +d++ k+ k L  + ++L++   +  + + + e++ 
  EPX71387.1 1468 ATKKEALSLRERIGQLDKekstQSAGCETTKEEVEKKNQALKQAVLKLRSRITQEVQKNDAMSKQFKALEVQLEKLRESSESQTQNAHNSESSK 1561
                  3445555555555444320000233445666677777777777777777777777777777777777777766666665544333333333332 PP

  == domain 12  score: -6.8 bits;  conditional E-value: 5
    KASH_CCD   35 eetnakLteeieeLkkklkstQqalqkaklleeEleelkalvkeleEkrarlkaqnkqle 94  
                  eet +     i++L++ l +  ++  k  +le+ l+ ++a ++e++ + +  + ++ q +
  EPX71387.1 1622 EETKQSHERQISNLRTELEM--RSKLKLSMLEKNLAKVRAQLQESNAQDKDPSVKATQSK 1679
                  67777777889999999887..56678889999999999988887766665555544444 PP

>> ERM  Ezrin/radixin/moesin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0  28.2   1.1e-06    0.0039       4     121 ..      62     179 ..      60     193 .. 0.94
   2 ?   -7.2  34.2         5   1.8e+04       5     203 ..     196     420 ..     191     500 .. 0.64
   3 ?    3.1  18.5      0.02        73      77     207 ..     569     690 ..     548     693 .. 0.70
   4 ?   -5.7  24.4         5   1.8e+04      18     184 ..     727     901 ..     694     908 .. 0.53
   5 ?  -12.4  47.3         5   1.8e+04       6     157 ..     913    1213 ..     908    1269 .. 0.48
   6 ?   -1.3  35.9      0.45   1.6e+03      32     208 ..    1222    1416 ..    1190    1433 .. 0.60
   7 ?   -6.2  48.0         5   1.8e+04      11     214 ..    1326    1557 ..    1311    1576 .. 0.55
   8 ?   -3.6  12.4       2.1   7.6e+03      77     169 ..    1618    1695 ..    1602    1725 .. 0.40

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 1.1e-06
         ERM   4 erekreleerLkqlqeeaekaqeaLreseetaelLaekarraeeeaelLeqkaaeaeeeiqrlkesaekeeeekeklerklreaeleaarleeeserke 102
                 e++++  ++r  +l+e+   ++e  ++ +e+ e+L++    ++e+  l + + ++  ee++ l +++++ ++  +++erkl e + ++++l+ee+++ e
  EPX71387.1  62 EHKQNVTNRRVLHLEEQLSSRNETVKQFQEKTEELQKDVDALREANSLIQSQVNKQSEEKNSLVIEKQEMNSRIADMERKLVESQNLLRTLHEEKQKGE 160
                 88999999******************************************************************************************* PP

         ERM 103 eeaerLkeeleeareaeee 121
                   +++L+++++e++e++++
  EPX71387.1 161 DSVRNLQQQMREMEENQRN 179
                 ***************9975 PP

  == domain 2  score: -7.2 bits;  conditional E-value: 5
         ERM   5 rekreleerLkqlqeeaekaqeaLreseetaelLaekarraeeeaelLeqkaaeaeeeiq.rlkesaekeeeekeklerklreaeleaarleeeserke 102
                 +ek+ l   +k lq+e++++ e+L+ s e  + L+e+   ++    +L++k a++ +e q +l+ + + +    +  + ++++ +  +++l++e e+++
  EPX71387.1 196 QEKNALVSDIKLLQDETRNMSEELKSSRESQNILQEQVTSLKVSNSELQKKYAKVVHESQtKLRDEGSGT----STTAMEVDNQNDVFNDLQKELEAQQ 290
                 7899999999***************************************999988666541555544433....3344444555555555555555555 PP

         ERM 103 eeaerLkeeleeareae......eeakekllealstpsks.....eseenveeseteeeeenseeesaeletde..................veklsle 172
                 + ++ ++++  e + ++      + ++e l + ++++ k+     +++ +v++++ ++ +++ ++ ++el+  +                    ++s++
  EPX71387.1 291 RLTTLWESQCSELKSQLnkslnyQSTSEDLDTSSNESLKEqletsKNQLKVANETINNLQSEVDKCASELQVTKerkevsptgvglfssiaqKLSASQN 389
                 555555555555555552222212233333333333322222221111111111111122222222233332222344444445555554332223455 PP

         ERM 173 ieeeRvtylekskrlqeqLkeLkseleqlkd 203
                 +e + +++ + + rlq+   +L+++l+ + d
  EPX71387.1 390 PEISFTKVYSDNMRLQQAVLNLQQQLDRAND 420
                 5555666777777777777777777776655 PP

  == domain 3  score: 3.1 bits;  conditional E-value: 0.02
         ERM  77 keklerklreaeleaarleeeserkeeeaerLkeeleeareae...eeakekllealstpskseseenveeseteeeeenseeesaeletdeveklsle 172
                   ++++k+ e++l ++  ee +++ e+ ++ L++el+ a+ +     ++++ l+e+l++ +     e+ ++s +++++ ++        +++v++++++
  EPX71387.1 569 NLEIQKKASEYQLSIR-TEELNDQHEHSTNALQNELKLANTKMenfVHERSVLKEMLNMYK-----EKLAQSVSQKTSTENG------PSQAVDDIEKQ 655
                 4567788888888774.57788888999999999999988888333345566777777773.....2223333222222222......23445567889 PP

         ERM 173 ieeeRvtylekskrlqeqLkeLkseleqlkdeekq 207
                  e  R +++  ++ l ++ ++L s+leq++ e ++
  EPX71387.1 656 LEMYRSEMVAANESLSKRINDLISQLEQTRKEANK 690
                 9999**************************99877 PP

  == domain 4  score: -5.7 bits;  conditional E-value: 5
         ERM  18 qeeaekaqeaLreseetaelLaekarraeeeaelLeqkaaeaeeeiqrlkesaekeeeekeklerklreaeleaarleeeserkeeeaerLkeeleear 116
                 qe  +++  +  +  e+  +L+    r+  e  +L+ +++ + +  qrl  ++ +  +e+e+l + + + ++++++ ++  +  +   e+  +eleea 
  EPX71387.1 727 QEVLNRQDSNAGRIYEEHIQLKSLCSRMNSEIANLTSEKEVFGKIQQRLTSENDNLLAERERLTNLVSNLQSLLNEQQRIFSLNKISFETKNKELEEAI 825
                 444444444444444444455555555556666666666666666666666666666666666666666666666555444444444444455555555 PP

         ERM 117 eaeeeakekllealstpsks........es.eenveeseteeeeenseeesaeletdeveklsleieeeRvtyleks 184
                 +++++ ++kl + l+ +++         +s +++ +e e  ++e+ + + s ele+ +  + + ++e ++v++l+++
  EPX71387.1 826 NTLQDSNQKLENSLQLANELtnakdidiDSlRQKLDEVEATKQEHLKVKDSLELENRGL-QSRISSEINKVEELQRK 901
                 55555555555555544333444445542233444444444444444555666666655.44555566666666554 PP

  == domain 5  score: -12.4 bits;  conditional E-value: 5
         ERM    6 ekreleerLkqlqeeaekaqeaLreseetaelLaekarraeeeaelLeqkaaeaeeeiqrlkesaekeeeeke....klerklreaeleaarleees 98  
                  ++ el    + l+ e    q  L+ s++ +++L+e +r aee  e+L+++ + ++  +++  +++ ++ +  e    +le+kl +a+++ ++  e++
  EPX71387.1  913 RETELSSVVFDLKTENSSLQTSLNASNDNIKRLEEASRLAEETLEKLQREYQSLQLSTSKQLKENTENIKALEkrsnELEEKLIKAQQQHHNDNEQK 1009
                  4567777777788888888888888888888888888888888888888888776554433333333333333000134444444444444444444 PP

         ERM   99 erke....eeaerLkeeleeareaeeeakekllealstpsks..................eseenveeseteeeeensee................. 156 
                  + +     +e+e+L +e+  ar+ e++  +k + + ++ +k                                   n ++                 
  EPX71387.1 1010 DGRIsvliKENEQLTTEITDARNLEKKLLQKQRSLQQEVVKLsedcrkahdayekellrhA---------------NAMSslqklrteyesvlerts 1091
                  4432222256666666666666666555554444444443222222211111222222110...............111122223333333333333 PP

         ERM  157 ................................................................................................. 156 
                                                                                                                   
  EPX71387.1 1092 nvseptesnnriatreitdtpdlastapnvvalrkqnalllahiqtptdpnsstldikseklgfvmklslsdlqtyvkqmfnevsiltcqkeltlie 1188
                  3333333334444555555555555555666666655555555555555555555555555555555555555555555555555555555555555 PP

         ERM  157 ........................e 157 
                                          +
  EPX71387.1 1189 nkrlkklveqsnqiiiefqstqevS 1213
                  5555555555555555555555541 PP

  == domain 6  score: -1.3 bits;  conditional E-value: 0.45
         ERM   32 eetaelLaekarraeeeaelLeqkaaeaeeeiqrlkesaekeeeekeklerklreaeleaarleeeserkeeeaerLkeeleeareae......... 119 
                  + t + L +  + +    + L +k++e +  i++l+e+ +  e+  e+  +  re e e++ ++e  +r ee+++rL+++ +++  ++         
  EPX71387.1 1222 TPTDNNLPQMVKLLNDSNKFLRKKEEEHNDIINKLQERVNSLERDLEAQLNHCRELENEVSSVKEITRRTEEDNQRLQQHNQQILYSLkenkvsdss 1318
                  4566677777888888888899999999999999999999999999999999999999999999999999999999999877777777222222233 PP

         ERM  120 ...eeakekllealstpsks..es.eenveeseteeeeenseeesaeletdeveklsleieee...........RvtylekskrlqeqLkeLksele 199 
                      +a ekll+ l+++ ++  ++ ++ +e+ e+ e+e+++++++       +e+l++++++              + lek++++++qL++ +sele
  EPX71387.1 1319 aeaSKADEKLLDELRQNIEKltTElNSTKETIEKLESEKTDASNT-------IEQLTARSKTVaaawrskydqlVAKSLEKHNQVRQQLSQKTSELE 1408
                  322333344444444443333311122222222222222222222.......333332222223333333333346678999999999999999998 PP

         ERM  200 qlkdeekqt 208 
                  + k++e +t
  EPX71387.1 1409 S-KIQETNT 1416
                  5.5555555 PP

  == domain 7  score: -6.2 bits;  conditional E-value: 5
         ERM   11 eerLkqlqeeaekaqeaLreseetaelLaekarraeeeaelLeqkaaea.....eeeiqrlkesaekeeeekeklerklreaeleaarle....... 95  
                  e+ L +l++++ek   +L+  +et+e+L+ ++  a +  e+L+++ + +      +  q +++s ek ++ +++l +k+ e e+++++         
  EPX71387.1 1326 EKLLDELRQNIEKLTTELNSTKETIEKLESEKTDASNTIEQLTARSKTVaaawrSKYDQLVAKSLEKHNQVRQQLSQKTSELESKIQETNtlrgklq 1422
                  3445677778888888888888888888888888888888887777666333333333445566666666777777777777777776665555555 PP

         ERM   96 .............eeserkeeeaerLkeeleeareae.eeakekllealstpsks..........eseenveeseteeeeenseeesaeletdevek 168 
                               +         ++Lke     ++ae   ++++l ea+++   +          +  +  +e++t+++  ++++e+ e ++++ ++
  EPX71387.1 1423 kyeengvsgdndgD--------RQNLKEVSDDSQRAEyISTQQRLVEATAELDATkkealslrerI-GQLDKEKSTQSAGCETTKEEVEKKNQALKQ 1510
                  55444333333331........33333333333333222222333333333322222222222110.122222222222222233334444444555 PP

         ERM  169 lsleieeeRvtylekskrlqeqLkeLkseleqlkdee.kqtelDklh 214 
                  ++l+     +++++k+  + +q k+L+ +le+l+  +  qt++ +  
  EPX71387.1 1511 AVLKLRSRITQEVQKNDAMSKQFKALEVQLEKLRESSeSQTQNAHNS 1557
                  555555555789**********************8764677775544 PP

  == domain 8  score: -3.6 bits;  conditional E-value: 2.1
         ERM   77 keklerklreaeleaarleeeserkee.eaerLkeeleeareaeeeakekllealstpsks....eseenveeseteeeeenseeesaeletdevek 168 
                  k+  e+  +  e+++++l+ e e++ + + + L+++l ++r++++e +++ ++ + ++++s    +                    s+ ++ +++e+
  EPX71387.1 1618 KKIQEETKQSHERQISNLRTELEMRSKlKLSMLEKNLAKVRAQLQESNAQDKDPSVKATQSkddeK--------------------SSTITPKTNES 1694
                  222233333334444444444444433122334444444444443333333333222222222321....................22222222211 PP

         ERM  169 l 169 
                  +
  EPX71387.1 1695 T 1695
                  1 PP

>> ADIP  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7  15.8      0.74   2.7e+03      39     110 ..      48     120 ..      41     130 .. 0.73
   2 ?    1.1  16.6       0.1   3.7e+02      56     130 ..     112     188 ..     104     192 .. 0.81
   3 ?    0.3   7.0      0.18   6.5e+02      68     121 ..     197     250 ..     190     257 .. 0.77
   4 ?    4.1   3.1     0.013        46      67     106 ..     270     309 ..     265     321 .. 0.87
   5 ?    3.7   9.8     0.017        61      57     116 ..     306     365 ..     302     370 .. 0.80
   6 ?   -0.6   0.6      0.36   1.3e+03      74     132 ..     399     457 ..     385     461 .. 0.75
   7 ?    0.1   3.8      0.21   7.4e+02      57     106 ..     452     501 ..     435     510 .. 0.84
   8 ?   -6.6   9.8         5   1.8e+04      63     115 ..     573     614 ..     545     643 .. 0.38
   9 !   10.9   8.7   9.9e-05      0.36      52     128 ..     664     740 ..     655     746 .. 0.94
  10 ?    1.3  13.9     0.094   3.4e+02      55     151 ..     772     861 ..     754     862 .. 0.75
  11 ?    2.2   8.0     0.047   1.7e+02      43      98 ..     855     910 ..     843     919 .. 0.83
  12 ?    1.4  11.6     0.083     3e+02      85     149 ..     923     987 ..     910     990 .. 0.71
  13 ?    2.8  15.7     0.032   1.2e+02      49     124 ..     986    1061 ..     983    1091 .. 0.87
  14 !   16.8  13.3   1.5e-06    0.0053      56     128 ..    1233    1305 ..    1227    1313 .. 0.94
  15 ?   -2.4  18.3       1.3   4.6e+03      51     150 ..    1318    1421 ..    1313    1423 .. 0.73
  16 ?   -7.3  12.1         5   1.8e+04      52     104 ..    1390    1443 ..    1384    1482 .. 0.60
  17 ?   -4.7  16.4         5   1.8e+04      71     147 ..    1454    1534 ..    1430    1546 .. 0.47
  18 ?   -5.2  16.1         5   1.8e+04      53     116 ..    1503    1567 ..    1495    1580 .. 0.73
  19 ?   -2.4  10.0       1.2   4.4e+03      53     104 ..    1623    1675 ..    1615    1709 .. 0.74

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.74
        ADIP  39 nviysLlqardrdleqresl.netirkleaeierlqskierlktqleqlerelalvqakerqlekklktleqk 110
                 n + + ++ ++ + e+++++ n+++  le  +++ + ++++ ++++e+l++ ++++ ++   ++ ++ ++++ 
  EPX71387.1  48 NSLKEQMVLQEVNSEHKQNVtNRRVLHLEEQLSSRNETVKQFQEKTEELQKDVDALREANSLIQSQVNKQSEE 120
                 5555566777778888777536788999999999999999999999999999998888777777777666554 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.1
        ADIP  56 eslnetirklea...eierlqskierlktqleqlerelalvqakerqlekklktleqklknekeelqrlknalqqikt 130
                  ++n++ +++++   e++ ++s+i  ++++l ++++ l ++++++++ e ++++l+q++ +e ee+qr+ + +q+ kt
  EPX71387.1 112 SQVNKQSEEKNSlviEKQEMNSRIADMERKLVESQNLLRTLHEEKQKGEDSVRNLQQQM-REMEENQRNFTLNQSSKT 188
                 4555555444433339***************************************9986.57899***9999999887 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 0.18
        ADIP  68 eierlqskierlktqleqlerelalvqakerqlekklktleqklknekeelqrl 121
                 e+  l s+i+ l++++     el+++ + ++ l+ ++++l+  + +++ + ++ 
  EPX71387.1 197 EKNALVSDIKLLQDETRNMSEELKSSRESQNILQEQVTSLKVSNSELQKKYAKV 250
                 566778888888888888888888888888888888888888888777776665 PP

  == domain 4  score: 4.1 bits;  conditional E-value: 0.013
        ADIP  67 aeierlqskierlktqleqlerelalvqakerqlekklkt 106
                  e ++++  ++ l+++le+++r ++l+++++ +l+ +l +
  EPX71387.1 270 MEVDNQNDVFNDLQKELEAQQRLTTLWESQCSELKSQLNK 309
                 678899999**************************99976 PP

  == domain 5  score: 3.7 bits;  conditional E-value: 0.017
        ADIP  57 slnetirkleaeierlqskierlktqleqlerelalvqakerqlekklktleqklkneke 116
                 +ln+ ++  +++ + ++s+ e+lk+qle ++++l++++++ ++l+ ++ +  + l+ +ke
  EPX71387.1 306 QLNKSLNYQSTSEDLDTSSNESLKEQLETSKNQLKVANETINNLQSEVDKCASELQVTKE 365
                 5666666666666667999***************************99988777776665 PP

  == domain 6  score: -0.6 bits;  conditional E-value: 0.36
        ADIP  74 skierlktqleqlerelalvqakerqlekklktleqklknekeelqrlknalqqiktqy 132
                 s+  rl++ +  l+++l+ ++ k      ++k+     ++++ee++r++  + +++ q+
  EPX71387.1 399 SDNMRLQQAVLNLQQQLDRANDKICWFFYQIKQRVPIFQQQREEIARNNVYMIDMSEQL 457
                 45567777778888888888888888888888888888888888888887766666665 PP

  == domain 7  score: 0.1 bits;  conditional E-value: 0.21
        ADIP  57 slnetirkleaeierlqskierlktqleqlerelalvqakerqlekklkt 106
                  ++e++++ +  i + ++++e lk q e+++ +l + q ++r+l+++++ 
  EPX71387.1 452 DMSEQLSTSKEIINHTKQEFEGLKLQHEETHLRLMATQVQCRDLTREVQC 501
                 5789999999999********************************99875 PP

  == domain 8  score: -6.6 bits;  conditional E-value: 5
        ADIP  63 rkleaeierlqskierlktqleqlerelalvqakerqlekklktleqklknek 115
                 +k+ +e+ +l+ ++e l +q e            ++ l+ +lk +++k+ n  
  EPX71387.1 573 QKKASEY-QLSIRTEELNDQHEH----------STNALQNELKLANTKMENFV 614
                 1111111.223333333322222..........22222222222222222222 PP

  == domain 9  score: 10.9 bits;  conditional E-value: 9.9e-05
        ADIP  52 leqreslnetirkleaeierlqskierlktqleqlerelalvqakerqlekklktleqklknekeelqrlknalqqi 128
                  +++esl+++i++l + +e+ +++ +++k + + + ++l ++ ++  +l+k++ +l++ +  ++e l+r+ +++ +i
  EPX71387.1 664 VAANESLSKRINDLISQLEQTRKEANKVKYREQLSLQRLNVSRQNVDSLRKEMNELKSLNGYLQEVLNRQDSNAGRI 740
                 5689*******************************************************************999876 PP

  == domain 10  score: 1.3 bits;  conditional E-value: 0.094
        ADIP  55 reslnetirkleaeierlqskierlktqleqlerelalvqakerqlekklktleqklknekeelqrlknalqqiktqyahel.kkkdreiekLkeklk 151
                 ++ l+ ++ +l ae erl++ ++ l+  l +++r  +l    + + e+k+k+le++++++++++q+l+n lq     +a+el   kd+ i++L++kl 
  EPX71387.1 772 QQRLTSENDNLLAERERLTNLVSNLQSLLNEQQRIFSLN---KISFETKNKELEEAINTLQDSNQKLENSLQ-----LANELtNAKDIDIDSLRQKLD 861
                 566667777777777777777777777777777776664...4578999999999999999******99986.....344431468888888888775 PP

  == domain 11  score: 2.2 bits;  conditional E-value: 0.047
        ADIP  43 sLlqardrdleqreslnetirkleaeierlqskierlktqleqlerelalvqaker 98 
                 sL q++d+  ++++++ +   +le e+  lqs+i++  +++e+l+r+l+++q+  +
  EPX71387.1 855 SLRQKLDEVEATKQEHLKVKDSLELENRGLQSRISSEINKVEELQRKLSHQQSMSA 910
                 66677788888899999999999999999999999999999999999999887655 PP

  == domain 12  score: 1.4 bits;  conditional E-value: 0.083
        ADIP  85 qlerelalvqakerqlekklktleqklknekeelqrlknalqqiktqyahelkkkdreiekLkek 149
                 +l++e++++q  ++  + ++k+le++ +   e l++l++  q+++ + +  lk ++  i+ L ++
  EPX71387.1 923 DLKTENSSLQTSLNASNDNIKRLEEASRLAEETLEKLQREYQSLQLSTSKQLKENTENIKALEKR 987
                 67777777777777777777777777777777777777777777777777777777777777665 PP

  == domain 13  score: 2.8 bits;  conditional E-value: 0.032
        ADIP   49 drdleqreslnetirkleaeierlqskierlktqleqlerelalvqakerqlekklktleqklknekeelqrlkna 124 
                  +r  e +e+l +  ++  +++e++  +i+ l +++eql++e++ + + e++l +k+++l+q + +++e+ ++   a
  EPX71387.1  986 KRSNELEEKLIKAQQQHHNDNEQKDGRISVLIKENEQLTTEITDARNLEKKLLQKQRSLQQEVVKLSEDCRKAHDA 1061
                  5777888999999999***************************999999999999999999999999999987655 PP

  == domain 14  score: 16.8 bits;  conditional E-value: 1.5e-06
        ADIP   56 eslnetirkleaeierlqskierlktqleqlerelalvqakerqlekklktleqklknekeelqrlknalqqi 128 
                  ++ln+ ++ l+   e  +  i++l++++ +ler l+++ + +r+le ++ + ++ ++++ e++qrl++ +qqi
  EPX71387.1 1233 KLLNDSNKFLRKKEEEHNDIINKLQERVNSLERDLEAQLNHCRELENEVSSVKEITRRTEEDNQRLQQHNQQI 1305
                  67899999999999999******************************************************98 PP

  == domain 15  score: -2.4 bits;  conditional E-value: 1.3
        ADIP   51 dleqreslnetirkleaeierlqskierlktqleqlerelalvqakerqlekklktleqklknekee.lqrlknalqqiktqyah...elkkkdrei 143 
                   +e+ ++ ++ + +l+  ie+l+++ ++ k+  e+le+e + + ++  ql+++ kt  ++ +++ ++ +++   +  q+++q+++   el  k +e 
  EPX71387.1 1318 SAEASKADEKLLDELRQNIEKLTTELNSTKETIEKLESEKTDASNTIEQLTARSKTVAAAWRSKYDQlVAKSLEKHNQVRQQLSQktsELESKIQET 1414
                  5666667777788888899999999999999999999999999999999999999999998888877357888888888888776222444555555 PP

        ADIP  144 ekLkekl 150 
                  ++L+ kl
  EPX71387.1 1415 NTLRGKL 1421
                  5666665 PP

  == domain 16  score: -7.3 bits;  conditional E-value: 5
        ADIP   52 leqreslnetirkleaeierlqskierlktqleqlere.lalvqakerqlekkl 104 
                  le  +++ ++++++++e+e++ ++++ l  +l+++e   ++  +  +rq+ k++
  EPX71387.1 1390 LEKHNQVRQQLSQKTSELESKIQETNTLRGKLQKYEENgVSGDNDGDRQNLKEV 1443
                  555666667777777777777777777776666665331334444444444444 PP

  == domain 17  score: -4.7 bits;  conditional E-value: 5
        ADIP   71 rlqskierlktqleqlerelalvqakerqlekklktleqklknekeelqrlknalqq....iktqyahelkkkdreiekLk 147 
                  + q++    +++l ++++e+ ++ ++  ql k+  t+++   ++kee+++ ++al+q    ++   ++e+ k+d + ++ k
  EPX71387.1 1454 STQQRLVEATAELDATKKEALSLRERIGQLDKEKSTQSAGCETTKEEVEKKNQALKQavlkLRSRITQEVQKNDAMSKQFK 1534
                  333444444444444444444555555555555555555555555555554444443222234444444444444444433 PP

  == domain 18  score: -5.2 bits;  conditional E-value: 5
        ADIP   53 eqreslnetirkleaeierlqskierlktqleqlerela.lvqakerqlekklktleqklkneke 116 
                  + +++l++ + kl++ i++  +k + +++q ++le +l+ l ++ e q++ +  ++++k+  e+ 
  EPX71387.1 1503 KKNQALKQAVLKLRSRITQEVQKNDAMSKQFKALEVQLEkLRESSESQTQNAHNSESSKTSDEQK 1567
                  45677888888888888888888888888888888888877777777777777777777666654 PP

  == domain 19  score: -2.4 bits;  conditional E-value: 1.2
        ADIP   53 eqreslnetirkleaeie.rlqskierlktqleqlerelalvqakerqlekkl 104 
                  e+++s++++i++l++e+e r + k + l+++l++ + +l+ ++a++++   k 
  EPX71387.1 1623 ETKQSHERQISNLRTELEmRSKLKLSMLEKNLAKVRAQLQESNAQDKDPSVKA 1675
                  789999*********99945566888888888888888887777766544443 PP

>> Tox-REase-5  Restriction endonuclease fold toxin 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.2      0.15   5.4e+02      43      84 ..     242     283 ..     240     289 .. 0.88
   2 ?   13.5   0.2   2.2e-05     0.078      19      83 ..     598     662 ..     577     668 .. 0.85
   3 ?   -3.6   0.0       4.6   1.6e+04      49      82 ..    1239    1276 ..    1211    1282 .. 0.61
   4 ?   -0.8   0.1      0.63   2.3e+03      46      77 ..    1380    1411 ..    1331    1422 .. 0.77
   5 ?   -3.1   0.3       3.2   1.1e+04      43      79 ..    1623    1659 ..    1610    1673 .. 0.60

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.15
  Tox-REase-5  43 EaKagYdqffdkkepklkksfkgadklleqaerqaravealg 84 
                  E  ++Y++ +++++ kl  + +g+++++ ++ +q+++ + l+
   EPX71387.1 242 ELQKKYAKVVHESQTKLRDEGSGTSTTAMEVDNQNDVFNDLQ 283
                  66789******************************9977655 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 2.2e-05
  Tox-REase-5  19 vkseewelldvdfDGfksaeclllEaKagYdqffdkkepklkksfkgadklleqaerqaraveal 83 
                   +++e +l +++  +f +++ +l+E  + Y++ + +++++++ + +g ++ ++ +e+q+++++++
   EPX71387.1 598 ALQNELKLANTKMENFVHERSVLKEMLNMYKEKLAQSVSQKTSTENGPSQAVDDIEKQLEMYRSE 662
                  45566677899****************************9*********************9885 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 4.6
  Tox-REase-5   49 dqffdkkep....klkksfkgadklleqaerqaravea 82  
                   ++f++kke+       k ++ +++l    e q++ +++
   EPX71387.1 1239 NKFLRKKEEehndIINKLQERVNSLERDLEAQLNHCRE 1276
                   46666666644434444455555566666666666655 PP

  == domain 4  score: -0.8 bits;  conditional E-value: 0.63
  Tox-REase-5   46 agYdqffdkkepklkksfkgadklleqaerqa 77  
                    +Ydq++ k+++k  +  ++ ++ + + e++ 
   EPX71387.1 1380 SKYDQLVAKSLEKHNQVRQQLSQKTSELESKI 1411
                   57888888888866666666555555555554 PP

  == domain 5  score: -3.1 bits;  conditional E-value: 3.2
  Tox-REase-5   43 EaKagYdqffdkkepklkksfkgadklleqaerqara 79  
                   E+K+  ++ +++   +l ++ k + ++le+   ++ra
   EPX71387.1 1623 ETKQSHERQISNLRTELEMRSKLKLSMLEKNLAKVRA 1659
                   6777777777766665555556555555554444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1727 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3778  (0.21072); expected 358.6 (0.02)
Passed bias filter:                      558  (0.0311228); expected 358.6 (0.02)
Passed Vit filter:                       289  (0.0161191); expected 17.9 (0.001)
Passed Fwd filter:                       121  (0.00674884); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 5.83u 0.43s 00:00:06.26 Elapsed: 00:00:01.16
# Mc/sec: 4493.84
//
Query:       EPX71388.1  [L=809]
Description: RNA-binding splicing factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.6e-57  193.0  11.2    1.4e-56  192.2  11.2    1.4  1  GCFC       GC-rich sequence DNA-binding factor-like protein
      1e-16   60.5   0.9    2.7e-16   59.2   0.9    1.8  1  G-patch    G-patch domain
      3e-09   36.8   0.8    9.8e-09   35.2   0.8    1.9  1  G-patch_2  G-patch domain
      0.006   16.9  10.4     0.0067   16.8   3.7    2.6  2  TIP_N      Tuftelin interacting protein N terminal
     0.0077   16.1   3.1      0.021   14.7   0.8    2.3  2  AAA_21     AAA domain, putative AbiEii toxin, Type IV TA syst
  ------ inclusion threshold ------
       0.18   12.6   0.6       0.45   11.3   0.6    1.8  1  FIVAR      FIVAR domain


Domain annotation for each model (and alignments):
>> GCFC  GC-rich sequence DNA-binding factor-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  192.2  11.2   4.5e-60   1.4e-56       8     276 ..     344     628 ..     337     629 .. 0.96

  Alignments for each domain:
  == domain 1  score: 192.2 bits;  conditional E-value: 4.5e-60
        GCFC   8 FeelkekyleeykeaelselavslvaPllrealleWePLkdptalvdnlkswrklLe.................eevkekekkrkesttpyetllwelw 89 
                  e+l ++++e    +el+++avs+++ ++ e +++W+ +  p++l++++ +wrk L+                 e + e+++ ++ + t+ye+l++ lw
  EPX71388.1 344 IETLPAEFSEPNMHYELDSVAVSILMAVVSEPFKNWDVFRHPYFLLEHFLTWRKSLQsndfrpktdrpdafmdmELETEEDQSGQTNFTHYESLMMALW 442
                 56777888888889*********************************************************99877788999999************** PP

        GCFC  90 lpsvrssvanewdprdpdpmlalleaWkplLPefvldnlleqlilpkLeaaveeWdPlskkqttrlvpihswifpwlpllgeerlepglvsdirrklrq 188
                  ++v + ++++w++rd +++l+lleaW+ + P+ v+++l++  ilpkL+++v+ W+P  +++++++ ++h+wifpwlp+lg +  ++ l+s + ++l++
  EPX71388.1 443 ETRVSKVLRDDWNSRDTSKALHLLEAWDVVVPSKVKETLVKDTILPKLKEEVSIWKPSMRSRKRSTDSLHHWIFPWLPYLG-NFSNE-LLSLVLSRLSR 539
                 *********************************************************************************.44444.*********** PP

        GCFC 189 aLdaWdpsrsalaiLkpWkdvfspaewdklllrhilpklaralq.efeinpkqqslellenvlkWkdllspsvlaeLlekeffpkwlqv 276
                 +L++Wd+  + l  ++ W+ +f+++  d +l+++ilpkl+++lq +++i+p +q+++ + +vl+Wkd ++  v+ +Ll++ ffpkwl +
  EPX71388.1 540 ILSEWDIGFGPLDDFSAWRFAFTDDMLDRVLEKTILPKLEKFLQeKLVIDPSNQDMNVILTVLAWKDAFRATVFGKLLIDYFFPKWLMI 628
                 **************************************************************************************976 PP

>> G-patch  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.2   0.9   9.1e-20   2.7e-16       1      44 [.     113     156 ..     113     157 .. 0.97

  Alignments for each domain:
  == domain 1  score: 59.2 bits;  conditional E-value: 9.1e-20
     G-patch   1 tsniGvkmLqkmGWkpGqGLGkkeqGiaePieakikkdraGlGa 44 
                 t ++G+kmL+kmG+k+GqGLG + +Gia+P+e k +++r GlGa
  EPX71388.1 113 TTGFGAKMLEKMGYKKGQGLGANAEGIASPVESKLRPERVGLGA 156
                 5799***************************************9 PP

>> G-patch_2  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.2   0.8   3.3e-12   9.8e-09      16      58 ..     115     157 ..     113     160 .. 0.95

  Alignments for each domain:
  == domain 1  score: 35.2 bits;  conditional E-value: 3.3e-12
   G-patch_2  16 eFGaAlLrGMGWkegqgigknkkgrvkpeepkrRpgrlGLGak 58 
                  FGa +L  MG+k+gqg g n++g   p+e k Rp+r GLGa 
  EPX71388.1 115 GFGAKMLEKMGYKKGQGLGANAEGIASPVESKLRPERVGLGAV 157
                 6****************************************96 PP

>> TIP_N  Tuftelin interacting protein N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   3.7   2.2e-06    0.0067      24      83 ..      25      85 ..       1     105 [. 0.54
   2 ?    3.6   0.6     0.029        86      39      60 ..     173     198 ..     157     249 .. 0.73

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 2.2e-06
       TIP_N 24 r.rr....qtKeeaiYGvFaedDsddeeeerrskkrsrrgkkdytkpvnFvsggikkeakedkek 83
                + +r    + Ke+a++GvF++ D+++e+++ + + +++r      k ++Fv  +   ++k+  + 
  EPX71388.1 25 KwERdgrtRQKERAMLGVFGS-DEEEEGGYYNPELKKFRVP---PKNIQFVGKNERLKSKQTVTS 85
                2111343489**********5.8888777777766666665...788999977755554433332 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.029
       TIP_N  39 e.dDsddeeeerrskkrsrrgk...k 60 
                 e +Ds+dee +++++++s+++k   +
  EPX71388.1 173 EiSDSEDEEIRQKRERESKKKKrskE 198
                 44578876666666666555543331 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.1      0.11   3.4e+02     134     229 ..       3     103 ..       2     117 .. 0.80
   2 !   14.7   0.8   6.9e-06     0.021      75     217 ..     181     335 ..     167     379 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.11
      AAA_21 134 epndlqfgkaltditsrawsllllldglrke.....rigllnifadyfgfakekrllqrlvrslklveielsdlgegeeliasvderlrergvvfleng 227
                 ++++++f++++++ t+r    +++ +++r +     + g++    ++ g++ +++l + +v++ + ++      ++ ++  +s+d ++   +    +++
  EPX71388.1   3 DYSSEDFEEDFDLETRRSGLGKKWERDGRTRqkeraMLGVFGSDEEEEGGYYNPELKKFRVPPKNIQFVGKNERLKSKQTVTSSDILEGTHDAPKKKKE 101
                 7889999999999****************99*****999999999999999999999999999998887776666666666666666555555555555 PP

      AAA_21 228 dg 229
                  g
  EPX71388.1 102 EG 103
                 55 PP

  == domain 2  score: 14.7 bits;  conditional E-value: 6.9e-06
      AAA_21  75 glrlersqv.eeklssvetllesgllldkrsleeedvfnpeargirggvsvfslkelsvsepndlqfgkaltditsrawsllllldglrke........ 164
                 ++r++r++  + k+ s+e+l +s +l++++ +++++ + +   ++ + ++ + + ++svs++ ++ + kaltd++ +++ l++l  +   +        
  EPX71388.1 181 EIRQKREREsKKKKRSKENLISSSELSKSLGDFSIPPVLASILDAGISETKRIELTSSVSKSGAEANDKALTDSIDQLSGLAHLESKN--Hvtnwqqlq 277
                 677888888999999*****************************************************************99999764..345999999 PP

      AAA_21 165 ......rigllnifadyfgfakekrllqrlvrslklveielsdlgegeeliasvderlr 217
                       ++   +i+++y ++++e+ +l++l+ +++++++++ ++ ++e+ ++svde+++
  EPX71388.1 278 arkayiKMEKERISNEYDKKNMEISRLGKLLEKVDEIHNNIANM-AVENVNESVDELEK 335
                 99999999999999999999999999999999999999888766.66666666666655 PP

>> FIVAR  FIVAR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.6   0.00015      0.45      40      71 .]     312     341 ..     268     341 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00015
                 HHHC...TSTTTTCCCHHHHHHHHHHHHHHHC CS
       FIVAR  40 nailnktnnpnatveqVnqalanlnqainaLn 71 
                  +i n+    n+ ve+Vn+++++l++ai+ L+
  EPX71388.1 312 DEIHNNI--ANMAVENVNESVDELEKAIQPLT 341
                 5555333..67******************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (809 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1473  (0.0821574); expected 358.6 (0.02)
Passed bias filter:                      610  (0.0340231); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.74u 0.29s 00:00:01.03 Elapsed: 00:00:00.46
# Mc/sec: 5307.56
//
Query:       EPX71389.1  [L=367]
Description: UBA domain-containing protein Ucp14 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0054   16.6   0.9      0.012   15.5   0.2    2.0  2  UBA       UBA/TS-N domain


Domain annotation for each model (and alignments):
>> UBA  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.27   4.9e+03      18      25 ..      66      73 ..      65      82 .. 0.73
   2 !   15.5   0.2   6.6e-07     0.012      15      37 .]     343     364 ..     343     364 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.27
                HHHHHHHH CS
         UBA 18 evveALra 25
                ev++AL+ 
  EPX71389.1 66 EVLQALFI 73
                79999985 PP

  == domain 2  score: 15.5 bits;  conditional E-value: 6.6e-07
                 -HHHHHHHHHHTTTSHHHHHHHH CS
         UBA  15 dreevveALratgnNeErAveyL 37 
                 +r+++v+AL++t+ +++rAve L
  EPX71389.1 343 TRAQAVQALSQTN-DVQRAVELL 364
                 599**********.*******87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (367 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       583  (0.0325172); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 2527.83
//
Query:       EPX71390.1  [L=220]
Description: manganese superoxide dismutase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.2e-34  115.7   2.2    1.5e-33  115.0   2.2    1.3  1  Sod_Fe_C  Iron/manganese superoxide dismutases, C-terminal do
    3.9e-28   97.8   1.6    7.1e-28   96.9   1.6    1.5  1  Sod_Fe_N  Iron/manganese superoxide dismutases, alpha-hairpin


Domain annotation for each model (and alignments):
>> Sod_Fe_C  Iron/manganese superoxide dismutases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.0   2.2   1.7e-37   1.5e-33       3     100 ..     119     214 ..     117     216 .. 0.95

  Alignments for each domain:
  == domain 1  score: 115.0 bits;  conditional E-value: 1.7e-37
                 HHHHHHHHHHHSSHHHHHHHHHHHHHHSSSSEEEEEEEETTTEEEEEEEETTTBGGGGTTCEEEEEE-SGGGTHHHHTT-HHHHHHHHGGGBBHHHHH CS
    Sod_Fe_C   3 gelaeaieedfgslekfkkefkaaalavfgsGwawLvldkkkkLeivttknqdnplvkeakplLalDvwehAYyldyqnkradYieafwnvvnWkeve 100
                 g+l+++i +++gsle+f+ke++ a +a++gsGwawLv+dk+++L+i++t+nqd+ +   ak ++++D wehAYy +y+n++a+Y++afw+v+nWke++
  EPX71390.1 119 GSLHKSIVAKWGSLENFQKEMNGALAAIQGSGWAWLVKDKEGSLHITSTANQDTVIN--AKVIIGIDAWEHAYYPQYENRKAEYFKAFWSVMNWKEAQ 214
                 789**************************************************9666..578*********************************987 PP

>> Sod_Fe_N  Iron/manganese superoxide dismutases, alpha-hairpin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.9   1.6   7.9e-32   7.1e-28       3      82 .]      29     106 ..      27     106 .. 0.94

  Alignments for each domain:
  == domain 1  score: 96.9 bits;  conditional E-value: 7.9e-32
                 -----SS-TTTTTTTS-HHHHHHHHHTHHHHHHHHHHHHHHCHHHHCHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTB- CS
    Sod_Fe_N   3 eLpeLpYaydaLePhisketlelHhdkHhktYvnnlNkalekleeakkkleelvlkklekalrnnagghvnHslfwknls 82 
                  Lp+LpYay+aLeP is+ +++lHhdkHh+tYv+nlN+a +kl++ + +l++ v  +l+ a+++n+ggh+nH+ fw++++
  EPX71390.1  29 ALPPLPYAYNALEPAISETIMKLHHDKHHNTYVTNLNAAQDKLSQPNLDLKSEV--ALQAAIKFNGGGHINHTQFWSIMA 106
                 59*****************************************99888877766..8999*****************995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       426  (0.0237604); expected 358.6 (0.02)
Passed bias filter:                      293  (0.0163422); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 1570.87
//
Query:       EPX71391.1  [L=426]
Description: Clp1-interacting protein Nsk1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (426 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       706  (0.0393775); expected 358.6 (0.02)
Passed bias filter:                      250  (0.0139439); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.29s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 2887.44
//
Query:       EPX71392.1  [L=235]
Description: 3-oxoacyl-[acyl-carrier-protein] reductase Oar2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-41  142.9   0.0    1.4e-41  142.6   0.0    1.0  1  adh_short_C2     Enoyl-(Acyl carrier protein) reductase
    1.6e-39  135.4   0.1    1.9e-39  135.1   0.1    1.1  1  adh_short        short chain dehydrogenase
      7e-12   45.6   0.2    1.3e-11   44.7   0.2    1.5  2  KR               KR domain
    9.6e-10   38.3   0.4    3.8e-09   36.4   0.4    1.9  1  Epimerase        NAD dependent epimerase/dehydratase family
    1.2e-09   37.8   0.1    1.5e-09   37.4   0.1    1.2  1  Polysacc_synt_2  Polysaccharide biosynthesis protein
    3.3e-08   33.3   0.2    3.9e-07   29.8   0.0    2.0  2  GDP_Man_Dehyd    GDP-mannose 4,6 dehydratase
    2.1e-06   27.4   0.1    3.1e-06   26.8   0.1    1.2  1  DUF1776          Fungal family of unknown function (DUF1776)
      0.001   18.2   0.0     0.0031   16.7   0.0    1.7  2  RmlD_sub_bind    RmlD substrate binding domain
     0.0013   19.0   0.1     0.0028   17.9   0.0    1.6  2  Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding doma
     0.0035   17.3   0.0     0.0062   16.5   0.0    1.4  1  NAD_binding_10   NAD(P)H-binding
     0.0035   17.3   0.1      0.028   14.3   0.0    2.0  2  3HCDH_N          3-hydroxyacyl-CoA dehydrogenase, NAD binding
     0.0065   16.5   0.0        3.2    7.7   0.0    2.2  2  Glyco_transf_4   Glycosyltransferase Family 4
  ------ inclusion threshold ------
      0.012   16.2   0.0      0.023   15.3   0.0    1.5  1  F420_oxidored    NADP oxidoreductase coenzyme F420-dependent
      0.013   15.6   0.0       0.16   12.0   0.0    2.2  2  Glyco_trans_4_2  Glycosyl transferase 4-like
      0.039   13.8   0.1       0.06   13.2   0.1    1.3  1  Palm_thioest     Palmitoyl protein thioesterase
      0.072   13.4   0.2        3.1    8.1   0.0    2.3  2  TrkA_N           TrkA-N domain


Domain annotation for each model (and alignments):
>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.6   0.0   1.2e-44   1.4e-41       3     233 ..      10     235 .]       8     235 .] 0.90

  Alignments for each domain:
  == domain 1  score: 142.6 bits;  conditional E-value: 1.2e-44
                   TTSHHHHHHHHHHHTT-EEEEEESSGGH.HHHHHHHHHHTTSE..EEE--TTSH.HHHHHHHHHHHHHHSSEEEEEE-----EGCSS-GGGH-HHHH CS
  adh_short_C2   3 asgIGraiAkalaeeGaevvltdlneea.kkrveelaeelgae..vlecDVtde.eqvealveevvekfgklDilvnnagiapklkgpfletsreef 95 
                    sgIG+ iA++  ++G +  l  +nee+ +++v++l +  g++  +  +DV ++ +++ +lve+     +++D +v++ag++++  + f+ ts++e+
    EPX71392.1  10 SSGIGKRIAQLWSQQGHHCHLISRNEERlQETVRSLSNIQGQShkYTVADVCKDmNSISTLVER-----ETFDTVVHAAGVSQS--SLFVRTSENEI 99 
                   59**************************9*******9988855356999*97661556666665.....789************..*********** PP

                   HHHHHHHTHHHHHHHHHHHH.HCTSC....CEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCTGGGGSTTHHH CS
  adh_short_C2  96 draldvnlyslfllakaalp.lmkeg....gsivnlssvgaervvpnynaygaaKaalealtrylAvelgpkgiRvNavspgpikTlaasgikgfde 187
                   ++++++nl + ++l+k a+   ++++      ++ lss  a+ ++p++++y+a+K ale +t+ lA e++++giRvNav+pg+++T + s     d+
    EPX71392.1 100 NNVINTNLLAPMKLSKIAVSiWLRQRipkdRLVLFLSSRLANYSLPGTSVYAASKMALETFTKVLATEVAARGIRVNAVAPGYTDTSMLS-----DH 191
                   ********************6444447775779999****************************************************76.....56 PP

                   HHHHHHHHSTTSS-B-HHHHHHHHHHHCSGGGTT--SEEEEESTTG CS
  adh_short_C2 188 lleelearaplgrlgtpeevaeaalfLasdeasyitGqtlvvDgGl 233
                   +++ +++r plgrl++++ev +a+ fL+   +sy+tG++l + gGl
    EPX71392.1 192 MRQIAKQRVPLGRLASTDEVVDACTFLLK--NSYTTGTILPIHGGL 235
                   8999************************8..57***********96 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.1   0.1   1.7e-42   1.9e-39       3     190 ..       4     191 ..       2     196 .. 0.94

  Alignments for each domain:
  == domain 1  score: 135.1 bits;  conditional E-value: 1.7e-42
                 EEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHT.TSEEEEEE-TTT.SHHHHHHHHHHHHHHHSSESEEEE---SS--SSGGGCSHH CS
   adh_short   3 vlvtGassGIGraiakelakeGakvvvvdrseekleevakelkee.gakalaiqvDvt.dreevealvekavkklgkldvLvnNAGitgsgpfselsee 99 
                 +l+tG+ssGIG+ ia+   ++G ++ +++r+ee+l+e++ +l +  g++  +  +Dv  d++++++lve+      + d +v+ AG+++s+ f ++se+
  EPX71392.1   4 ILITGGSSGIGKRIAQLWSQQGHHCHLISRNEERLQETVRSLSNIqGQSHKYTVADVCkDMNSISTLVERE-----TFDTVVHAAGVSQSSLFVRTSEN 97 
                 8********************************************99999*******98999999999985.....9********************** PP

                 HHHHHHHHHTHHHHHHHHHHHHHHHHC...TTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHHHHHH CS
   adh_short 100 ewervievNltgvflltravlpamlkq...ssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdmakel 190
                 e+++vi++Nl ++++l++ ++  +l+q   +   + + sS  ++++++g+++Y+AsK a++ +t+ la e+a +girvnavaPG++dT m  + 
  EPX71392.1  98 EINNVINTNLLAPMKLSKIAVSIWLRQripKDRLVLFLSSRLANYSLPGTSVYAASKMALETFTKVLATEVAARGIRVNAVAPGYTDTSMLSDH 191
                 *************************65121455688******************************************************8765 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.7   0.2   1.2e-14   1.3e-11       4     165 ..       5     166 ..       3     183 .. 0.79
   2 ?   -1.5   0.0       1.9   2.1e+03      45      79 ..     165     199 ..     161     204 .. 0.80

  Alignments for each domain:
  == domain 1  score: 44.7 bits;  conditional E-value: 1.2e-14
                 EEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHT.T-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE---------TTT-- CS
          KR   4 litGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaeleal.gaevevvaaDvsdkdavealleeikaeeppikGvihaAgvlrdklleemt 101
                 litGG  g+G+ +a+   ++g +h  l+sR+   +e+ ++++++l++  g + ++  aDv +   ++++ + +++  ++   v+haAgv++ +l+ +++
  EPX71392.1   5 LITGGSSGIGKRIAQLWSQQG-HHCHLISRN---EERLQETVRSLSNIqGQSHKYTVADVCKD--MNSISTLVER--ETFDTVVHAAGVSQSSLFVRTS 95 
                 9*************9777777.688999***...56677799999996589999999999864..4444444443..35899***************** PP

                 HHHHHHHHTTTTHHHHHHHHHTTT......S--SEEEEE.EEHHHHH--TT-HHHHHHHHHHHHHHHHHHH CS
          KR 102 aedleqvlapKvkGawnLhelled......esldffvlf.SSiagllgsagqanYaaaNaflDalaeyrrs 165
                 ++++++v++  + +   L ++  +       + d +vlf SS  + +  +g + Yaa    l+++ +  ++
  EPX71392.1  96 ENEINNVINTNLLAPMKLSKIAVSiwlrqrIPKDRLVLFlSSRLANYSLPGTSVYAASKMALETFTKVLAT 166
                 *******9988888888887766555555555666665439999**************9999998776554 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 1.9
                 HHHHHHTT-EEEE----TT-HHHHHHHHHHHHHHS CS
          KR  45 iaelealgaevevvaaDvsdkdavealleeikaee 79 
                  +e++a+g++v++va   +d + ++  +++i ++ 
  EPX71392.1 165 ATEVAARGIRVNAVAPGYTDTSMLSDHMRQIAKQR 199
                 56788999999999999999999999888888776 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.4   0.4   3.4e-12   3.8e-09       1     196 [.       4     198 ..       4     228 .. 0.71

  Alignments for each domain:
  == domain 1  score: 36.4 bits;  conditional E-value: 3.4e-12
                 EEEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC............EEEE--TT-HH.HHHHHHHHHT-SEEEE--S---HHHHHHSHHH CS
   Epimerase   1 ilVtGatGfiGsalvkallekgyevigldrlssasntarledl............elveldltdrs.alerlfkeeqpdavihlAavggvaassedpad 86 
                 il+tG++  iG+ +++ + ++g++++ ++r++++ ++     +            + + +d++++  ++  l+++e +d+v+h+A+v+  +  + + + 
  EPX71392.1   4 ILITGGSSGIGKRIAQLWSQQGHHCHLISRNEERLQE-----TvrslsniqgqshKYTVADVCKDMnSISTLVERETFDTVVHAAGVSQSSLFVRTSEN 97 
                 8*****************************9333332.....22456799**999888888876554999999999**********9887666666555 PP

                 HHHHHTHHHHHHHHHHHHHTCTEEEEEEEGGGGTSCSSS.SBSTCSTTS----SSHHHHHHHHHHHHHHHHHHHHT-EEEEEEESEEESTTS-TTSTTS CS
   Epimerase  87 fieknlqgtlnlleaarkagvkrllflsSsevYGkdaeq.pkeettltgplkpnspYaaaKlageklveayaaqyglnaiilrlfnlyGprngegevsr 184
                   e+n ++++nll  ++ +++   + l   +  +kd  +   ++ + + +l+ +s Yaa+K+a e  ++ +a +    a  ++  n + p+    ++++
  EPX71392.1  98 --EINNVINTNLLAPMKLSKIAVSIWL--RQRIPKDRLVlFLSSRLANYSLPGTSVYAASKMALETFTKVLATEV---AARGIRVNAVAPG---YTDTS 186
                 ..5566666666666665555322222..33445444432345555556789999**********9999988877...4445555666676...55777 PP

                 HHHHHHHHHHTT CS
   Epimerase 185 vipalirkileg 196
                 +++  +r+i+++
  EPX71392.1 187 MLSDHMRQIAKQ 198
                 777777777654 PP

>> Polysacc_synt_2  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.4   0.1   1.4e-12   1.5e-09       1     166 [.       4     178 ..       4     202 .. 0.79

  Alignments for each domain:
  == domain 1  score: 37.4 bits;  conditional E-value: 1.4e-12
                      EEEETTTSHHHHHHHHHHHHHB-SEEEEEES-HHHHHHHHHH......-TTEEEE....E--T.T-HHHHHHHTT..T-SEEEE------.... CS
  Polysacc_synt_2   1 vlvtGagGsiGselvrqilkkkpkkiillerdElklyeiekeleeelkkkklkveivpvigdv.rdkerlekaleelkvdvvfhaAAlKh.... 89 
                      +l+tG++  iG+++  q+ +++ ++  l++r+E +l+e  ++l ++++ ++ k++    ++dv +d +++++++e+ + d+v+haA + +    
       EPX71392.1   4 ILITGGSSGIGKRI-AQLWSQQGHHCHLISRNEERLQETVRSL-SNIQGQSHKYT----VADVcKDMNSISTLVERETFDTVVHAAGVSQsslf 91 
                      89**********97.5788999999***********9999998.46666666666....888746899******************99985555 PP

                      HHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-SE.......EEEEEEGGGSS-...-SHHHHHHHHHHHHHHHGGG--SSS--EEEEE CS
  Polysacc_synt_2  90 VPlveenpleaiktNvlgtenvieaaieagvkk.......vvliStDKAvnP...tnvmGatKrlaekllqalakeseekktkfvvv 166
                      V + e+++ ++i+tN l+ +++ ++a++   ++       v+++S+  A ++   t+v+ a+K++ e ++  la+e +++  ++ +v
       EPX71392.1  92 VRTSENEINNVINTNLLAPMKLSKIAVSIWLRQripkdrlVLFLSSRLANYSlpgTSVYAASKMALETFTKVLATEVAARGIRVNAV 178
                      78899***************9999998765443222233355678776655322389999999999998888888877776666665 PP

>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.8   0.0   3.5e-10   3.9e-07       1     120 [.       5     124 ..       5     138 .. 0.81
   2 ?    1.8   0.0      0.11   1.3e+02     150     167 ..     147     164 ..     141     209 .. 0.79

  Alignments for each domain:
  == domain 1  score: 29.8 bits;  conditional E-value: 3.5e-10
                    EEETTTSHHHHHHHHHHHHCT-CCEEEEEEESS-TTHHHHHCTTT...TTGCCEEEEE--TT.-HHHHHHHHHHHT-SEEEE--S---....HHHH CS
  GDP_Man_Dehyd   1 LiTGiaGfiGsylaelLlekgyevhgivrrsssfntgriehlakdpkeeleenlklhkgDlt.DssslerllaevqpdevynLAAqsh....Vdvs 91 
                    LiTG++  iG  +a+l+ ++g+++h i r+++ ++ +++++l + +     ++ k   +D++ D +s+  l+++  +d+v++ A+ s     V++s
     EPX71392.1   5 LITGGSSGIGKRIAQLWSQQGHHCHLISRNEERLQ-ETVRSLSNIQG----QSHKYTVADVCkDMNSISTLVERETFDTVVHAAGVSQsslfVRTS 95 
                    9*************************999888766.66777765433....345566677653899******************987444459999 PP

                    TTSHHHHHHHHTHHHHHHHHHHHHCT..T CS
  GDP_Man_Dehyd  92 fekPeytaevnvlGtlrLLeairalglek 120
                     ++   ++++n+l+ ++L +++ +++l++
     EPX71392.1  96 ENEINNVINTNLLAPMKLSKIAVSIWLRQ 124
                    99999999999999999988888777764 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.11
                    -SHHHHHHHHHHHHHHHH CS
  GDP_Man_Dehyd 150 rsPYaaaKlyadwivvny 167
                    +s Yaa+K++ +++++  
     EPX71392.1 147 TSVYAASKMALETFTKVL 164
                    799********9999865 PP

>> DUF1776  Fungal family of unknown function (DUF1776)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.1   2.7e-09   3.1e-06     109     202 ..      92     185 ..      83     208 .. 0.85

  Alignments for each domain:
  == domain 1  score: 26.8 bits;  conditional E-value: 2.7e-09
     DUF1776 109 etiplsswaselnerllspi.ltlqallplltsrakqkakiivvnpsissslnlpfhapEalvssalsalfevLkrelrphnidvtqikLGnldl 202
                    +++++++++n++ll+p+ l   a    l++r   k +++++  s +++++lp  ++ a    al+++++vL++e++  +i v  +  G  d 
  EPX71392.1  92 VRTSENEINNVINTNLLAPMkLSKIAVSIWLRQRI-PKDRLVLFLSSRLANYSLPGTSVYAASKMALETFTKVLATEVAARGIRVNAVAPGYTDT 185
                 55678899************555566777899988.9***********************************************99887776665 PP

>> RmlD_sub_bind  RmlD substrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   2.7e-06    0.0031       2      89 ..       3     117 ..       1     122 [. 0.89
   2 ?   -1.7   0.0       1.1   1.2e+03     123     143 ..     148     170 ..     145     202 .. 0.52

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 2.7e-06
                    EEEEESTTSHHHHHHHHHCTTTSEEEEEE-TT......................T--.TTSHHHHHHHHHHH--SEEEE------....HHHHHHS CS
  RmlD_sub_bind   2 kilvtGanGqlGseLakqlaeeglevlaltre......................eld.ltdaeavaellkeakpdvvvnaAAyta....vDkaEse 70 
                    +il+tG++  +G+ +a++ +++g++++ ++r+                       +d ++d +++ +l++    d vv+aA   +    v   E+e
     EPX71392.1   3 RILITGGSSGIGKRIAQLWSQQGHHCHLISRNeerlqetvrslsniqgqshkytVADvCKDMNSISTLVERETFDTVVHAAGVSQsslfVRTSENE 98 
                    7*************************99999999*****************99955626899*******************988755557789999 PP

                    HHHHHHHHTHHHHHHHHHH CS
  RmlD_sub_bind  71 eeaayavnaeavealAeaa 89 
                     ++  + n  a+++l++ a
     EPX71392.1  99 INNVINTNLLAPMKLSKIA 117
                    9999999999999999887 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.1
                    SHHHHHHHHHHHH..HHHH-SSE CS
  RmlD_sub_bind 123 nvYGrtKlaGEqa..vlaagkka 143
                    +vY+++K+a E    vla+   a
     EPX71392.1 148 SVYAASKMALETFtkVLATEVAA 170
                    56666666666541123333333 PP

>> Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   2.5e-06    0.0028       1      87 [.       4      93 ..       4     128 .. 0.78
   2 ?   -2.2   0.0       4.1   4.5e+03      64      76 ..     165     177 ..     144     198 .. 0.53

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 2.5e-06
                     EEEE--.SHHHHHHHHHHHCTCCT-GEEEEEESSHHHHHHHHCHHTTTCEEEEE--TTTH...HHHHHHHHTTS..SEEEE-SSGGGHHHHHH CS
  Sacchrp_dh_NADP  1 vliiGa.GsvGqavaellarhfdvdaeitvadrskeklealaakalgvrfeaialdaeny...eavLaallkeg..dlvvnlsppissldvlk 87
                     +li G+  ++G+ +a+l ++++++    ++++r++e+l++++ ++++++ ++++ +++++      ++ l++    d vv++++  +s   ++
       EPX71392.1  4 ILITGGsSGIGKRIAQLWSQQGHH---CHLISRNEERLQETVRSLSNIQGQSHKYTVADVckdMNSISTLVEREtfDTVVHAAGVSQSSLFVR 93
                     567777799************996...******************777777777777665111333677777768999999999887766555 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 4.1
                      HHHHTTSSEEEE- CS
  Sacchrp_dh_NADP  64 aallkegdlvvnl 76 
                      a  ++ +++ vn+
       EPX71392.1 165 ATEVAARGIRVNA 177
                      3333333333333 PP

>> NAD_binding_10  NAD(P)H-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   5.5e-06    0.0062       1      74 [.       8      95 ..       8     124 .. 0.62

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 5.5e-06
                    TTTSHHHHHHHHHHHHC-T-EEEEEETTHHHCHHHH......CTTTCEEEE--TT.-CCHHHHHHT..T-SEEEES---TCC......H CS
  NAD_binding_10  1 GAtGkvGrllvkellargghevtalvRnpeklaele......aeeglevvegdvt.dvedlaealk..gadaVvsalggggk......d 74
                    G++ ++G+++++   ++ gh+ +++ Rn+e+l+e        + +  + +++dv  d +++   ++    d+Vv a+g +++       
      EPX71392.1  8 GGSSGIGKRIAQLWSQQ-GHHCHLISRNEERLQETVrslsniQGQSHKYTVADVCkDMNSISTLVEreTFDTVVHAAGVSQSslfvrtS 95
                    89999******866666.7*************954311112233444455566642567777777533557777777665555554431 PP

>> 3HCDH_N  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   2.5e-05     0.028       9      69 ..      12      69 ..       6      86 .. 0.71
   2 ?    0.6   0.0       0.4   4.4e+02      14      56 ..     164     206 ..     159     223 .. 0.73

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 2.5e-05
                CCHHHHHHHHHHTT-EEEEE-S-HHHHHHHHHHHHHHHHCCTTTTSS-HHHHCCCHHCEEE CS
     3HCDH_N  9 tmGagiaavfasagleVvlvdiseealekalekieksleklvekgklkeeeveaalarisf 69
                 +G+ ia++  ++g++ +l+ ++ee+l++  +++++ ++ + +k  ++ ++v + ++ is+
  EPX71392.1 12 GIGKRIAQLWSQQGHHCHLISRNEERLQETVRSLSN-IQGQSHK--YTVADVCKDMNSIST 69
                58******************************9998.4443333..333344444444443 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.4
                 HHHHHHHTT-EEEEE-S-HHHHHHHHHHHHHHHHCCTTTTSS- CS
     3HCDH_N  14 iaavfasagleVvlvdiseealekalekieksleklvekgklk 56 
                 +a+ +a++g++V+ v           +++++  ++ v  g+l 
  EPX71392.1 164 LATEVAARGIRVNAVAPGYTDTSMLSDHMRQIAKQRVPLGRLA 206
                 6888999999999999977777777777777777777777766 PP

>> Glyco_transf_4  Glycosyltransferase Family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.0    0.0028       3.2      10      82 ..      16      86 ..       8     143 .. 0.72
   2 !    6.8   0.0    0.0057       6.3       5      36 ..     158     189 ..     157     209 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0028
  Glyco_transf_4 10 eLaraLarrGheVtvvtpgddgpleeevelvvrvprvplp.llkrllrslaflrrlrrllkrekpDvv.Hahspa 82
                    ++a+ + ++Gh++++++++ ++ +e      +++  +    +++        + ++  l++re +D v Ha +  
      EPX71392.1 16 RIAQLWSQQGHHCHLISRNEERLQETV----RSLSNIQGQsHKYTVADVCKDMNSISTLVERETFDTVvHAAGVS 86
                    6789999**********9999888887....33333333303445556667788888888888888665777655 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0057
  Glyco_transf_4   5 erhvleLaraLarrGheVtvvtpgddgpleee 36 
                     e+++  La + a+rG++V  v+pg+ + +   
      EPX71392.1 158 ETFTKVLATEVAARGIRVNAVAPGYTDTSMLS 189
                     899999******************99876655 PP

>> F420_oxidored  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.3   0.0     2e-05     0.023       6      81 ..       9      83 ..       3      96 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 2e-05
                   TTSHHHHHHHHHHHHTTS-GGCEEEEEESSCCCHHHHHHHHC...-EEECECHHHHHHH-SEEEE-S-HHHHHHHHHHC CS
  F420_oxidored  6 GaGnmgealasgllaagaqpheivvansrnpekaeelaeelg...vkvtavdneeaaeeadvvvlavkpedveevlsel 81
                   G+  +g+ +a+ ++++g   h+  ++ srn+e+++e+ ++l+    +  + + ++++++ + +   v  e ++ v+ ++
     EPX71392.1  9 GSSGIGKRIAQLWSQQG---HHCHLI-SRNEERLQETVRSLSniqGQSHKYTVADVCKDMNSISTLVERETFDTVVHAA 83
                   55569************...*99988.***********99985543333445566667777776666666666666655 PP

>> Glyco_trans_4_2  Glycosyl transferase 4-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00015      0.16      10      82 ..      11      82 ..       3      97 .. 0.74
   2 ?    1.3   0.0      0.28   3.2e+02      10      51 ..     158     201 ..     143     215 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00015
  Glyco_trans_4_2 10 svhtlrlakeLakrgyeVhvitpkkgakdeleaegihvhrlkvdrkgpleyl.k.afklkklikkikPDvvhahy 82
                     s+  +r+a+  +++g+ +h+i++++++ +e+++   +++     +k+++ ++ k ++++  l++++ +D+v +h 
       EPX71392.1 11 SGIGKRIAQLWSQQGHHCHLISRNEERLQETVRSLSNIQGQS--HKYTVADVcKdMNSISTLVERETFDTV-VHA 82
                     556678888899**************8776665544444333..6676666558899************77.554 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.28
  Glyco_trans_4_2  10 svhtlrlakeLakrgyeVhvitp.kkga.kdeleaegihvhrlk 51 
                      +++t+ la e a+rg++V  + p  +++ +  + + +i+ +r++
       EPX71392.1 158 ETFTKVLATEVAARGIRVNAVAPgYTDTsMLSDHMRQIAKQRVP 201
                      68999999999999*99999988533333555556666555555 PP

>> Palm_thioest  Palmitoyl protein thioesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   5.4e-05      0.06      23      83 ..      22      95 ..       5     111 .. 0.66

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 5.4e-05
  Palm_thioest 23 ekligtyvknveigeseaedrkasffgnlndqvea.....vckk..........lelangfhaiGfSQGglflRal 83
                  +++ g ++++++ +e+ + ++   +++n++ q  +     vck+          +++++ +ha G+SQ  lf+R  
    EPX71392.1 22 SQQ-GHHCHLISRNEE-RLQETVRSLSNIQGQSHKytvadVCKDmnsistlverETFDTVVHAAGVSQSSLFVRTS 95
                  443.455666663333.34555555556666655555555666666666666667899****************75 PP

>> TrkA_N  TrkA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.0    0.0028       3.1       5      40 ..       9      44 ..       4      65 .. 0.78
   2 ?    3.2   0.1     0.094     1e+02      47      84 ..      72     109 ..      57     128 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0028
                S-SHHHHHHHHHHHH.TTEEEEEEESSHHHHHHHHHT CS
      TrkA_N  5 GlGrvGrslaeeLse.ggkdvvvidkdeerveelree 40
                G + +G+++a+  s+ g+ ++ +i ++eer++e  + 
  EPX71392.1  9 GSSGIGKRIAQLWSQqGH-HCHLISRNEERLQETVRS 44
                45679**********555.7**********9996544 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.094
                 S-TTSHHHHHHTTGGGESEEEE-SSSHHHHHHHHHHHH CS
      TrkA_N  47 gdatdeevLeeagiekadaviaatgddeanilavllak 84 
                    t + v+++ag+++ ++++ + ++   n++ + l+ 
  EPX71392.1  72 ERETFDTVVHAAGVSQSSLFVRTSENEINNVINTNLLA 109
                 55677889999**********99999988888776664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (235 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       713  (0.039768); expected 358.6 (0.02)
Passed bias filter:                      553  (0.0308439); expected 358.6 (0.02)
Passed Vit filter:                        73  (0.00407162); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 1711.05
//
Query:       EPX71393.1  [L=139]
Description: 60S ribosomal protein L23 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-36  125.3   0.0    1.6e-36  125.0   0.0    1.0  1  Ribosomal_L14  Ribosomal protein L14p/L23e


Domain annotation for each model (and alignments):
>> Ribosomal_L14  Ribosomal protein L14p/L23e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.0   0.0   9.1e-41   1.6e-36       4     122 .]      21     139 .]      19     139 .] 0.95

  Alignments for each domain:
  == domain 1  score: 125.0 bits;  conditional E-value: 9.1e-41
                    SS-EEE--SSSSBSEEEEEEETT-.....---EE-SSSEEEEEESSS-T...TTSSCEEEEEEEE-SS-EE-TTS-EEEESS-EEEEB-TTS-BSS CS
  Ribosomal_L14   4 lktrlkvaDNsgakevecikvlggk....krkaasvGdiivvsvkkakpkgkvkkgdvvkavvvrtkkevrrkdGsvirfddnaaVllnkkgeplG 95 
                    ++++l++aDNsgak++++++v g++    + +aas+Gd+i+++vkk+kp     +++++ a+vvr++k +rrkdG+++ f+dna V++n kge++G
     EPX71393.1  21 VQAILNCADNSGAKNLYIVSVFGTGarlnRLPAASCGDMILATVKKGKP---DLRKKIMPAIVVRQRKAWRRKDGVFLYFEDNAGVIVNPKGEMKG 113
                    789*******************999555344******************...89****************************************** PP

                    -.B-SBEEHHHHHH.-HHHHHTBSBE. CS
  Ribosomal_L14  96 trifgpvarelrekkflkivslApevl 122
                    + i+gpva+e+++  +++i+s A +v+
     EPX71393.1 114 SAITGPVAKECADL-WPRIASNAGTVV 139
                    *************9.********9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       260  (0.0145016); expected 358.6 (0.02)
Passed bias filter:                      241  (0.0134419); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.22s 00:00:00.59 Elapsed: 00:00:00.37
# Mc/sec: 1123.00
//
Query:       EPX71394.1  [L=197]
Description: phosphoric ester hydrolase Ssu72 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-86  288.0   0.0    3.1e-86  287.8   0.0    1.0  1  Ssu72     Ssu72-like protein


Domain annotation for each model (and alignments):
>> Ssu72  Ssu72-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  287.8   0.0   1.8e-90   3.1e-86       2     191 .]       8     197 .]       7     197 .] 0.99

  Alignments for each domain:
  == domain 1  score: 287.8 bits;  conditional E-value: 1.8e-90
                 EEEEEESSSSSHHHHHHHHHHHTT-EEEEEE-SSSEEEEESSTTSEEEE-TTS-HHHHHHHHHHHHHHHHHHTSHHHHHHHHHHH-SS--BGGG---.- CS
       Ssu72   2 kfavvcasnqnrsmeahkvLkkagfkvkSfGtgsavrLPgpsidkpnvyeFgtsyeeiyedLkskdkelyeanGllkmldrnrkiKkaPerwqeaeekk 100
                  ++v+casnqnrsmeah++Lk+ag++v SfGtgsavrLPgpsidkpn+y Fg +y++iy++L+s+d++ly+anGllkmldrnr+iK++P+rwq++e   
  EPX71394.1   8 DISVICASNQNRSMEAHNLLKNAGYQVDSFGTGSAVRLPGPSIDKPNIYPFGYPYDSIYKELESQDSRLYTANGLLKMLDRNRHIKRSPNRWQDQEF-I 105
                 689*******************************************************************************************877.* PP

                 -SEEEESSHHHHHHHHHHHHHS--SS-EEEEEEEE---SSHHHHHHHHHHHHHHHHHHHT-SS.HHHHHHHHHHHHHHHHT--.EEEEEEEE CS
       Ssu72 101 fdvvitceervfdavvedllsreselnrpvhvinvdikDnheeAlvgakaileLakaleeaedeleeevkeilaefeektkkl.llytvafy 191
                 +dvvitceer+fda++edl +r+++++rpv++invdikDnheeA+vg+kail+L+++l++a+d++e+e ++i+a++++k+++l +lyt++f+
  EPX71394.1 106 YDVVITCEERCFDAICEDLYRRGESKSRPVYLINVDIKDNHEEASVGGKAILDLVQQLTDAKDSFEDEFTDIMAQWQAKHPNLpALYTIHFF 197
                 ******************************************************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       616  (0.0343577); expected 358.6 (0.02)
Passed bias filter:                      536  (0.0298957); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1568.23
//
Query:       EPX71395.1  [L=634]
Description: GTPase activating protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.5e-21   74.2   4.2    3.2e-11   42.6   1.3    2.6  2  GIT_SHD        Spa2 homology domain (SHD) of GIT
  ------ inclusion threshold ------
       0.02   15.0   5.6       0.02   15.0   5.6    1.8  2  Tropomyosin_1  Tropomyosin like
      0.049   13.0   3.4      0.094   12.1   3.4    1.4  1  FAM76          FAM76 protein
          1    9.4   5.8        2.8    8.0   0.1    2.5  2  SWIRM-assoc_1  SWIRM-associated region 1


Domain annotation for each model (and alignments):
>> GIT_SHD  Spa2 homology domain (SHD) of GIT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.6   1.3   7.1e-15   3.2e-11       2      29 .]      34      61 ..      34      61 .. 0.97
   2 !   31.7   0.1   1.8e-11   8.3e-08       1      25 [.      82     106 ..      82     106 .. 0.98

  Alignments for each domain:
  == domain 1  score: 42.6 bits;  conditional E-value: 7.1e-15
     GIT_SHD  2 RqKLarLsnkqFeeLvtDVydEldRRet 29
                R+KL+rLs +qF eL+tDV dEl+RR++
  EPX71395.1 34 REKLQRLSHVQFSELLTDVADELQRRIN 61
                9*************************85 PP

  == domain 2  score: 31.7 bits;  conditional E-value: 1.8e-11
     GIT_SHD   1 ARqKLarLsnkqFeeLvtDVydEld 25 
                 ARqKLa+L ++++ +L++DVy+E++
  EPX71395.1  82 ARQKLASLAPSRLRDLCMDVYFEVQ 106
                 9**********************97 PP

>> Tropomyosin_1  Tropomyosin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   5.6   4.5e-06      0.02      35     109 ..     205     280 ..     200     289 .. 0.78
   2 ?   -2.2   0.4      0.91   4.1e+03      38      52 ..     314     328 ..     291     346 .. 0.54

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 4.5e-06
  Tropomyosin_1  35 qeiksLtkknqqleeevekleeklkeakekaeesekkktnnealtrkiql..LEeeleesdkkLkettekLretdvk 109
                    +  ++   k+++le+++ k ++ l  +k++  es k+k n+ea++ k ++  +Ee l e++ ++++ +ekL+e++++
     EPX71395.1 205 DSTTKYLAKIEMLENNLAKSNSLLDVSKSEI-ESLKAKLNSEAVHHKSRMfnMEEKLHEASLQITTLNEKLKESQLT 280
                    555556689**********988776666655.567778888877666554339********************9875 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.91
  Tropomyosin_1  38 ksLtkknqqleeeve 52 
                    ++L+k  ++  +e e
     EPX71395.1 314 NELEKSFEAQKDETE 328
                    333333332222222 PP

>> FAM76  FAM76 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   3.4   2.1e-05     0.094     151     291 ..     133     277 ..      97     285 .. 0.56

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.1e-05
       FAM76 151 kkkskskkskkskekskekkaskkkskkhkkrss....rlevskleeeklaeekesnetskk.....sldsnssdhlva...vtqLkeeiaslkkqleq 237
                 + +s+++ s ++  k++ +++s+ + ++   r +    ++  sk+ ++++ +++++     +      + ++s  h va    t+   +i+ l+ +l++
  EPX71395.1 133 QVASQRNPSATHGVKAEGSSSSSLHPSE---RRTtsspNVVNSKIASREAPSSSSH-----AlpmvpDAAPKSPPHRVAedsTTKYLAKIEMLENNLAK 223
                 2222222222222222111111111111...1111111222233332222222222.....12344466777777777533356677899999****99 PP

       FAM76 238 kdqellekdkkitelkaellekekelreklkelekeakekieklekkirellke 291
                  ++ l   + +i +lka+l ++  ++++++ ++e++ +e   ++++ +++l+  
  EPX71395.1 224 SNSLLDVSKSEIESLKAKLNSEAVHHKSRMFNMEEKLHEASLQITTLNEKLKES 277
                 9999999999*********************99998887777766666666543 PP

>> SWIRM-assoc_1  SWIRM-associated region 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   1.6      0.03   1.3e+02      31      83 ..     208     260 ..     200     261 .. 0.87
   2 ?    8.0   0.1   0.00062       2.8      39      63 ..     308     332 ..     306     342 .. 0.88

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.03
  SWIRM-assoc_1  31 etqlkKlelKLkqfeelEklleaerrelekqrqqLlleRlalkkevlkvaekl 83 
                     + l K+e+  + +++  +ll+  + e+e  + +L +e +  k ++ +++ekl
     EPX71395.1 208 TKYLAKIEMLENNLAKSNSLLDVSKSEIESLKAKLNSEAVHHKSRMFNMEEKL 260
                    566889999889999999**********************9999999999986 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.00062
  SWIRM-assoc_1  39 lKLkqfeelEklleaerrelekqrq 63 
                    +K  +++elEk +ea+++e+e+ ++
     EPX71395.1 308 TKVHHINELEKSFEAQKDETERWKR 332
                    5999******************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (634 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1188  (0.0662614); expected 358.6 (0.02)
Passed bias filter:                      502  (0.0279993); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.63u 0.29s 00:00:00.92 Elapsed: 00:00:00.47
# Mc/sec: 4061.03
//
Query:       EPX71396.1  [L=499]
Description: cytoplasmic phenylalanine-tRNA ligase alpha subunit Frs2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.3e-89  299.1   0.0    3.1e-89  298.6   0.0    1.2  1  tRNA-synt_2d     tRNA synthetases class II core domain (F)
    1.5e-14   54.0   0.1    3.8e-14   52.7   0.1    1.7  1  PheRS_DBD3       PheRS DNA binding domain 3
    1.4e-07   31.1   0.0    3.8e-06   26.5   0.0    2.2  2  tRNA_synthFbeta  Phenylalanyl tRNA synthetase beta chain CLM 
    0.00038   19.7   1.7     0.0034   16.5   0.0    3.0  3  tRNA-synt_2      tRNA synthetases class II (D, K and N)
  ------ inclusion threshold ------
      0.028   14.4   0.0      0.054   13.5   0.0    1.5  1  tRNA-synt_2b     tRNA synthetase class II core domain (G, H, 
      0.028   14.7   0.2        4.3    7.7   0.0    2.9  3  DWNN             DWNN domain
      0.032   14.2   4.1      0.045   13.7   1.8    2.4  2  PheRS_DBD2       PheRS DNA binding domain 2
      0.042   13.8   1.1        4.3    7.4   0.0    2.4  2  HTH_45           Winged helix-turn-helix
       0.12   12.1   0.5       0.34   10.6   0.1    1.9  2  DUF4364          Domain of unknown function (DUF4364)
       0.13   12.5   0.1         27    5.1   0.1    2.8  2  Rio2_N           Rio2, N-terminal


Domain annotation for each model (and alignments):
>> tRNA-synt_2d  tRNA synthetases class II core domain (F)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  298.6   0.0   1.7e-92   3.1e-89       2     240 ..     209     483 ..     208     489 .. 0.97

  Alignments for each domain:
  == domain 1  score: 298.6 bits;  conditional E-value: 1.7e-92
                   .-TSSCTSCTSHSB-SHHHHHHHHHHHHHHCTTCEESS.TTSEEEHHHHTSTTTSTTTSHHHCHTTSEBTCTSSS-..................... CS
  tRNA-synt_2d   2 idvtlpgkrieagklhpltkvleeikeiflelgfeeve.gpevesefynfdaLnvpqdhpaRdmqdtFylkkpeka..................... 76 
                   ++++++g + + g+lhpl+kv+ee++++f+elgfee+  +++v+s f+nfdaL+vpq+h+aRd+qdtF+lkkp+ +                     
    EPX71396.1 209 YNFAAEGIPPAGGCLHPLMKVREEFRKFFFELGFEEMPtNNYVDSGFWNFDALFVPQQHSARDVQDTFFLKKPAFTnklpdldyvarvksthengge 305
                   79999999999**************************999*******************************999999******************** PP

                   .............ECESEEE-SSTHHHHHHHH....TTS-SSEEEEEEEEEEBSST-SSSB-SEEEEEEEEEEETT--HHHHHHHHHHHHHHHCTST CS
  tRNA-synt_2d  77 .............veekllLRthttavqirtl....ekkkppikiisigrvfRrdavDathlaeFhqveglvvdenvsladlkgvleellkklfgae 156
                                +++kl+LRthttav+ ++l    ++   p+k++si+rvfR+++vDathlaeFhqveg+++d+n++l dl+g++e ++ k+ + +
    EPX71396.1 306 trgigyrapwseeETRKLILRTHTTAVSGNMLyklaKNGFRPAKYFSIDRVFRNETVDATHLAEFHQVEGVICDRNLTLGDLIGFMEVFFAKM-NVR 401
                   ************9999*****************9999999*****************************************************.777 PP

                   EEEEEEECEETTEEEEEEEEEEECCSSSSEEEEEEEEEE-HHHHHHTT-.TTSEEEEEEEEHHHHHHHHHT-SSGHHHHTT.HH CS
  tRNA-synt_2d 157 vkvrfrpsyfpftePsaevdvylvekkkkwlEllgaGmvrpevleavgideevsgfafGlGveRlamlkygieDiRelvendlr 240
                    ++rf+p+y+p+tePs+e++ y+ ek +kw+E++++Gm+rpe+le++g++++v++++fGl++eR +m+kygi+DiR+l+ + ++
    EPX71396.1 402 -NLRFKPAYNPYTEPSLEIFSYH-EKLGKWVEVGNSGMFRPEMLEPMGLPKDVRCLGFGLSLERPTMIKYGISDIRQLMGPKVN 483
                   .9*********************.*******************************************************99654 PP

>> PheRS_DBD3  PheRS DNA binding domain 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.7   0.1   2.1e-17   3.8e-14       1      59 []      76     132 ..      76     132 .. 0.88

  Alignments for each domain:
  == domain 1  score: 52.7 bits;  conditional E-value: 2.1e-17
  PheRS_DBD3   1 ShEarvfaavpp.eggisqkel.kklggdpvakiGfskAmknkWikkdkgdgkvvrkvdsi 59 
                 ShEa+vf+ +++   g+s+ el  kl g + a +G+++A+k +Wikk +gd k+++++dsi
  EPX71396.1  76 SHEAKVFNEICAsMSGLSIGELkDKL-G-NTAGLGQGRAFKLGWIKK-DGD-KLIKNTDSI 132
                 9*********977677******5555.6.45****************.788.5******98 PP

>> tRNA_synthFbeta  Phenylalanyl tRNA synthetase beta chain CLM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0     0.049        88      12      44 ..     220     252 ..     215     272 .. 0.87
   2 !   26.5   0.0   2.1e-09   3.8e-06      81     208 ..     335     453 ..     292     461 .. 0.82

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.049
  tRNA_synthFbeta  12 egelnkeqklrrklrdllagaGlnEvitysfvs 44 
                      +g l++  k+r++ r++  ++G+ E+ t + v+
       EPX71396.1 220 GGCLHPLMKVREEFRKFFFELGFEEMPTNNYVD 252
                      56689999******************9987665 PP

  == domain 2  score: 26.5 bits;  conditional E-value: 2.1e-09
  tRNA_synthFbeta  81 glLevlarNlargnedvrlFEigkvflkd.seeelpeeerhlaivltgkreeeswsekaravdfydlkgivealleslgiekvefepaehpalh 173
                      ++L +la+N   g +  + F i +vf+++  + +  +e +++ +v++ ++               dl g++e +++++++++++f+pa +p+ +
       EPX71396.1 335 NMLYKLAKN---GFRPAKYFSIDRVFRNEtVDATHLAEFHQVEGVICDRN-----------LTLGDLIGFMEVFFAKMNVRNLRFKPAYNPYTE 414
                      444444444...455566***********988899***************...........********************************* PP

  tRNA_synthFbeta 174 pgrsAeikvdgk......evGvlGelhpevleafdlkqrvy 208
                      p  s ei    +      evG  G + pe+le ++l++ v 
       EPX71396.1 415 P--SLEIFSYHEklgkwvEVGNSGMFRPEMLEPMGLPKDVR 453
                      *..577765333356678*******************9553 PP

>> tRNA-synt_2  tRNA synthetases class II (D, K and N)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.1      0.31   5.6e+02      27      46 ..     228     247 ..     222     279 .. 0.86
   2 !   16.5   0.0   1.9e-06    0.0034      92     119 ..     348     374 ..     331     403 .. 0.84
   3 ?   -0.1   0.0      0.21   3.8e+02     286     307 ..     456     477 ..     446     479 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.31
                  HHHHHHHHHHHHTT-EE--- CS
                  xxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2  27 tvtkavrkyleengfieiet 46 
                  +v + +rk+++e gf e+ t
   EPX71396.1 228 KVREEFRKFFFELGFEEMPT 247
                  78889**********99876 PP

  == domain 2  score: 16.5 bits;  conditional E-value: 1.9e-06
                  SEEEEEEEEE--S--BTTB-S-CEEEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2  92 drvfqiaraFRaEdsrtdrhlaEFtqie 119
                   ++f+i r+FR+E ++++ hlaEF q+e
   EPX71396.1 348 AKYFSIDRVFRNETVDAT-HLAEFHQVE 374
                  49**************77.566*****9 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.21
                  EEEEEHHHHHHHHCT-SSGGGC CS
                  xxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2 286 GlglGldRlvmlllgsesIrdv 307
                  G+gl+l+R +m+  g ++Ir++
   EPX71396.1 456 GFGLSLERPTMIKYGISDIRQL 477
                  9******************986 PP

>> tRNA-synt_2b  tRNA synthetase class II core domain (G, H, P, S and T)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0     3e-05     0.054       5     169 ..     317     475 ..     311     482 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 3e-05
                   ETTSEEEEE-SSSHHHHHHHHHHHEEEBGGSSEEEEEEEEEEBTTTSTBCTTTB-SEEEEEEEEEEESGGGHHHHHHHHHHHHHHHHHHTT.SCEEE CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2b   5 drndreyiLkPtneetfvelirdevlrskrLPlklyqiqtkyRdEksdsrGLlRvreFhqkdgyvfhaeaslddslrdlikaisriferlglefrai 101
                   +++ r++iL+   ++   ++  +  +++   P k++ i +++R+E+ d      + eFhq +g+++  +      l dli  ++ +f ++ +     
    EPX71396.1 317 EEETRKLILRTHTTAVSGNMLYKL-AKNGFRPAKYFSIDRVFRNETVDAT---HLAEFHQVEGVICDRNL----TLGDLIGFMEVFFAKMNVRNLRF 405
                   566788999988888888888866.555446***************9443...478********998876....78899999999999998654433 PP

                   EEEGTTSCBTTSEEEEEEEEETTTSEEEEEEEEEEEETHHHHHTTE....EEECTTSSEEEEEEEEEEEE.HH CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxx.xx RF
  tRNA-synt_2b 102 ielmsaksadykdkkefeavsesltkgieigtiqklgtrlserlga....tvldennreksvimicaaig.ve 169
                   +      ++  ++++e+  + e+l+k +e+g  +    ++ e +g+    + l    + +++ mi ++i+ + 
    EPX71396.1 406 KPA---YNPYTEPSLEIFSYHEKLGKWVEVGNSGMFRPEMLEPMGLpkdvRCLGFGLSLERPTMIKYGISdIR 475
                   333...3467899999999999999999999888887788888888766666666668888888888877555 PP

>> DWNN  DWNN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0      0.04        72      10      51 ..      23      66 ..      18      77 .. 0.73
   2 ?    7.7   0.0    0.0024       4.3       8      55 ..      79     126 ..      77     136 .. 0.83
   3 ?   -2.3   0.1       3.2   5.7e+03      27      47 ..     160     185 ..     154     193 .. 0.72

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.04
        DWNN 10 dyskitfdgtsisvfeLKreIie..kkklgkgtdfdLqiynaqt 51
                ++s+++f+g++++v +  ++I++  ++++ + ++ d+++y  +t
  EPX71396.1 23 NTSHLEFEGKKLTVQDAQSAILSlaARSMVEFERHDIEVYTLTT 66
                67899****************86114444566888888885444 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.0024
        DWNN   8 qkdyskitfdgtsisvfeLKreIiekkklgkgtdfdLqiynaqtkeey 55 
                 +k +++i    +++s++eLK +  ++ +lg+g++f L  ++++ ++ +
  EPX71396.1  79 AKVFNEICASMSGLSIGELKDKLGNTAGLGQGRAFKLGWIKKDGDKLI 126
                 67888999999************************9987777666654 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 3.2
        DWNN  27 KreIiekkkl.....gkgtdfdLqiy 47 
                 Kr+ +e++kl     +kg +f L+i 
  EPX71396.1 160 KRKLVERNKLmyfslKKGPNFSLTIE 185
                 57788888887776677788888875 PP

>> PheRS_DBD2  PheRS DNA binding domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   1.8   2.5e-05     0.045      20      32 ..     152     164 ..     151     165 .. 0.88
   2 ?   -0.9   0.0      0.96   1.7e+03       6      18 ..     483     495 ..     481     497 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 2.5e-05
  PheRS_DBD2  20 dkeknELKKRKLl 32 
                  k +n+LKKRKL+
  EPX71396.1 152 TKALNDLKKRKLV 164
                 599*********7 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.96
  PheRS_DBD2   6 kLkliqeGkadel 18 
                 +L liq+G a  l
  EPX71396.1 483 NLDLIQAGSAVRL 495
                 899*****87655 PP

>> HTH_45  Winged helix-turn-helix
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.0    0.0024       4.3      31      68 ..      34      74 ..      13      82 .. 0.83
   2 ?    4.7   0.3     0.017        31      38      73 ..     153     188 ..     150     191 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0024
      HTH_45 31 LsykllnkYLdmLvekgli...kkskekYvlTekGlellek 68
                L+ + +++ +  L  + ++   +++ e Y+lT +G+e+l++
  EPX71396.1 34 LTVQDAQSAILSLAARSMVefeRHDIEVYTLTTEGEEILKN 74
                555666777778888888877666899************86 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.017
      HTH_45  38 kYLdmLvekglikkskekYvlTekGlelleklkele 73 
                 k L+ L +++l++ +k +Y   +kG ++  ++++l+
  EPX71396.1 153 KALNDLKKRKLVERNKLMYFSLKKGPNFSLTIEKLN 188
                 5699*********************99988888765 PP

>> DUF4364  Domain of unknown function (DUF4364)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.1   0.00019      0.34       9      72 ..      12      74 ..       9      87 .. 0.82
   2 ?   -3.0   0.0         3   5.3e+03      39      64 ..     154     175 ..     152     197 .. 0.65

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00019
     DUF4364  9 lkkvkfpltnsqlseiileneytnYfdlqqalseLvesglieeeekenktlykiTekGketlel 72
                lkk++++ + ++ s++  e + ++  d q+a+  L    ++e  e+++ ++y++T +G+e+l+ 
  EPX71396.1 12 LKKLDEQNEIANTSHLEFEGKKLTVQDAQSAILSLAARSMVEF-ERHDIEVYTLTTEGEEILKN 74
                5666666666666666667777777899*************97.66***************985 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 3
     DUF4364  39 alseLvesglieeeekenktlykiTe 64 
                 al++L + +l+e     nk +y   +
  EPX71396.1 154 ALNDLKKRKLVER----NKLMYFSLK 175
                 6777777777773....444444444 PP

>> Rio2_N  Rio2, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0     0.027        49      35      74 ..      33      72 ..      17      78 .. 0.87
   2 ?    5.1   0.1     0.015        27      34      61 ..     141     171 ..     126     177 .. 0.76

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.027
      Rio2_N 35 rlkeeevkkrlsrllkaklisrktakydGYkLtyeGyDyL 74
                +l+ ++ ++++ +l+ + +++ +   ++ Y Lt eG  +L
  EPX71396.1 33 KLTVQDAQSAILSLAARSMVEFERHDIEVYTLTTEGEEIL 72
                6778889999************************996665 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.015
      Rio2_N  34 srlkeeevkk...rlsrllkaklisrktaky 61 
                 +++ke++++k   +l++l k+kl++r++ +y
  EPX71396.1 141 AEIKEHGTHKdtkALNDLKKRKLVERNKLMY 171
                 555555554323389***********98887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (499 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       470  (0.0262145); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.47
# Mc/sec: 3170.09
//
Query:       EPX71397.1  [L=434]
Description: histone deacetylase Hos2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      1e-80  271.5   0.0    1.2e-80  271.2   0.0    1.1  1  Hist_deacetyl  Histone deacetylase domain


Domain annotation for each model (and alignments):
>> Hist_deacetyl  Histone deacetylase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  271.2   0.0   6.9e-85   1.2e-80       1     306 [.      45     336 ..      45     337 .. 0.95

  Alignments for each domain:
  == domain 1  score: 271.2 bits;  conditional E-value: 6.9e-85
                    SCCGTHHHHHHHHHHHHT.THHHHCCE.EE-----HHHHTTTS-HHHHHHHHCHHHHCHHT.TTHCCHHHCCTSTSSSSSTHCTTTCCHHHHHHHH CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Hist_deacetyl   1 hpenpkRlsaileslaesvglldelelliqpseatkeellkvHskeYlelleslsnelkkkeeakekeleeiasklldddtpvspktlkaallavg 96 
                    hp++p+R+  i ++l   +gl d++  + +p++at +e++ +H ++Yl++l++++ +  ++    ++++++ +      d+p+++++++ +++++g
     EPX71397.1  45 HPMKPHRIT-IANHLVMGYGLHDKMN-VYSPRKATFNEMASFHREDYLDFLQKITPDDAETY---ADTFQKFN---IGADCPIFDGVYEFSQRSAG 132
                    89*******.9999*9999*998866.6**************************98876665...44555555...5689**************** PP

                    HHHHHHHHHHTTSSSEEEETT.SS--TT-BTTB-BTTBSS-HHHHHHHHHHHCC-SS-EEEEE-SSS--HHHHHHCTT-TTEEEEEEEE-CCTSTT CS
                    xxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Hist_deacetyl  97 avleavdavlsgsvkaafvlv.rPpgHHakaseasGFClvNnvaiaikylqakhelkrvailDvDvHhGnGteeafysdpdvltlSiHryegifyP 191
                    a+l+a +++ +g  +++++++  ++ HHak+ easGFC+vN++++ai ++ +   ++rv+++D+D+HhG+G+++afy++++vlt+S+H+y+g f+P
     EPX71397.1 133 ASLDASRKLTQG--QTDIAINwSGGLHHAKRAEASGFCYVNDIVLAILNMLR--YFPRVLYIDIDIHHGDGVQQAFYESDRVLTVSFHKYNGDFFP 224
                    **********99..9**********************************988..589*************************************** PP

                    SS--TT---SGGGTTSEEEEEE-TT-BHHHHHHHHHHCHHHHHCCH--SEEEEEE-STTBTTSTT-S-BB-HHHHHHHHHHHCCCHGS-G.EEEEE CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Hist_deacetyl 192 gtgaledlgegkgkgfnlnvpleegtgdeeylkvfeeilrpvleefkPdlilvsaGfDalkgdplgelnlsvegykeltkklaeladkvkkvvlll 287
                     tg+ ++ g + gk f++nvpl++g+gd++y++++++i++p ++ f+P++i++++G+D+l  d+lg +nls++ ++e++k  +++     ++++++
     EPX71397.1 225 ATGNFDENGIKGGKYFAMNVPLDDGIGDDQYTSLYKSIIEPTINTFQPSAIVLQCGADSLGYDRLGVFNLSIRAHGECVKFTKSFNI---PMLVVG 317
                    ************************************************************************************998...99**** PP

                    -S---HHHHHHHHHHHHHH CS
                    xxxxxxxxxxxxxxxxxxx RF
  Hist_deacetyl 288 eGGYnlealaravtavlsa 306
                    +GGY+l+++ara+ + +s+
     EPX71397.1 318 GGGYTLRNVARAWCYETSI 336
                    *************999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (434 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       322  (0.0179597); expected 358.6 (0.02)
Passed bias filter:                      307  (0.0171231); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 3066.34
//
Query:       EPX71398.1  [L=277]
Description: ING family Png1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.7e-20   71.2   4.4    1.4e-19   70.5   4.4    1.3  1  ING           Inhibitor of growth proteins N-terminal histone
    1.2e-06   28.3   9.2    1.9e-06   27.6   9.2    1.4  1  PHD           PHD-finger
     0.0028   17.2   3.0     0.0051   16.3   3.0    1.5  1  PHD_2         PHD-finger
     0.0062   16.7   0.7      0.014   15.6   0.7    1.5  1  zf-HC5HC2H_2  PHD-zinc-finger like domain
     0.0099   16.1   3.5     0.0099   16.1   3.5    1.9  2  zf-HC5HC2H    PHD-like zinc-binding domain
  ------ inclusion threshold ------
      0.015   14.8   0.2      0.024   14.1   0.2    1.3  1  Golgin_A5     Golgin subfamily A member 5


Domain annotation for each model (and alignments):
>> ING  Inhibitor of growth proteins N-terminal histone-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.5   4.4   4.7e-23   1.4e-19       1     100 [.       8     112 ..       8     113 .. 0.97

  Alignments for each domain:
  == domain 1  score: 70.5 bits;  conditional E-value: 4.7e-23
                 HHHHHHTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH.TS..S-HHHHHHHHH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         ING   1 yLedyldsvenLPlelqrnltelreiDakvqellkei...dskiekfl.kngslqknekeeels.riqeelkeaqelldeKiqlaqqaldlvdkhlrrL 94 
                 +L dyl+s++nLP+e+++ ++e+  +++ +++l k+i   d++i++ + + gs+ +++kee+l+ +i+e++++++ ++ eK+qla+ a  ++ +h++rL
  EPX71398.1   8 VLTDYLQSLDNLPDETKHTFDEISVKEMALHDLGKQIqaaDQQIQSHVkSLGSHVPHPKEESLYsSIREKYEKSIIIQSEKVQLAERARVVLMRHIKRL 106
                 699*********************************************9999***********99********************************** PP

                 HHCTXX CS
         ING  95 dqdlek 100
                 d +l k
  EPX71398.1 107 DDKLMK 112
                 *99876 PP

>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   9.2   6.4e-10   1.9e-06       1      51 [.     227     273 ..     227     274 .. 0.86

  Alignments for each domain:
  == domain 1  score: 27.6 bits;  conditional E-value: 6.4e-10
                 SBTTTTSTTSTTSCEEEET..TTSC.EEETTTSSSTHSHHSHHSSTBSSTTTHT CS
         PHD   1 rCavCkkksdeeeelvqCd..gCkr.wfHqkClkppleseekpegewlCekCke 51 
                 +C +C++     +++v Cd  +C+r wfH++C++++      peg w+Ce C+e
  EPX71398.1 227 YC-FCQQ--GSYGQMVACDneDCEReWFHMECVGLKAP----PEGTWYCEACRE 273
                 69.****..789******8446*844**********66....8889******97 PP

>> PHD_2  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   3.0   1.7e-06    0.0051       4      36 .]     238     272 ..     235     272 .. 0.82

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 1.7e-06
       PHD_2   4 llsCd..kCsva.VHasCYGvskesdgeeWlCrrCe 36 
                 ++ Cd   C+   +H++C G++ +++g  W+C+ C+
  EPX71398.1 238 MVACDneDCEREwFHMECVGLKAPPEG-TWYCEACR 272
                 67777666765439*************.*******6 PP

>> zf-HC5HC2H_2  PHD-zinc-finger like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.7   4.6e-06     0.014      48      85 ..     217     256 ..     197     261 .. 0.74

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 4.6e-06
  zf-HC5HC2H_2  48 kikkerlkekCllCkkr.kGaciqCskkeCkt.afHvtCa 85 
                   + ++e+ +ek ++C++  +G ++ C +++C++  fH+ C 
    EPX71398.1 217 EDQEEEDNEKYCFCQQGsYGQMVACDNEDCEReWFHMECV 256
                   3344556677788888769***********86269****7 PP

>> zf-HC5HC2H  PHD-like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   3.5   3.3e-06    0.0099      26      66 ..     214     256 ..     198     261 .. 0.69
   2 ?   -1.3   0.1      0.91   2.7e+03      38      47 ..     267     276 ..     260     277 .] 0.83

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 3.3e-06
  zf-HC5HC2H  26 dvekikkerkklkCylCkkk.vGaciqCskkkCkk.afHvtCa 66 
                 + e+ ++e+ + k ++C++  +G ++ C++++C++  fH+ C 
  EPX71398.1 214 EEEEDQEEEDNEKYCFCQQGsYGQMVACDNEDCEReWFHMECV 256
                 3444444555555557776559***********8637*****6 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.91
  zf-HC5HC2H  38 kCylCkkkvG 47 
                  C  C++k+G
  EPX71398.1 267 YCEACREKMG 276
                 6999999988 PP

>> Golgin_A5  Golgin subfamily A member 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.2   7.9e-06     0.024      46     151 ..      13     113 ..       2     131 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 7.9e-06
   Golgin_A5  46 saeldelkqerdllreelqklnqqieqlrtelqdleaqqqaeaeslreqlqeleeqleeerkakeeveaelerlkeelryleeelvrskatlqsrikdr 144
                  + ld+l +e +++ +e+   ++++++l +++q  ++q q+ ++sl  ++ + +e+    ++ +e++e+ +  ++e+++ +e    r+++ l+ +ik+ 
  EPX71398.1  13 LQSLDNLPDETKHTFDEISVKEMALHDLGKQIQAADQQIQSHVKSLGSHVPHPKEESL-YSSIREKYEKSIIIQSEKVQLAE----RARVVLMRHIKRL 106
                 67899999******************************************99988765.6889999*****99999999876....5677888888888 PP

   Golgin_A5 145 ekeiekl 151
                 ++++ kl
  EPX71398.1 107 DDKLMKL 113
                 8888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (277 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       965  (0.0538234); expected 358.6 (0.02)
Passed bias filter:                      522  (0.0291148); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 1932.24
//
Query:       EPX71399.1  [L=306]
Description: translation initiation factor eIF2 alpha subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.4e-38  131.6   0.0    2.4e-38  130.8   0.0    1.4  1  EIF_2_alpha  Eukaryotic translation initiation factor 2 alpha
    3.7e-12   46.4   3.0    9.6e-12   45.1   3.0    1.7  1  S1           S1 RNA binding domain


Domain annotation for each model (and alignments):
>> EIF_2_alpha  Eukaryotic translation initiation factor 2 alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.8   0.0   2.7e-42   2.4e-38       1     116 []     126     238 ..     126     238 .. 0.96

  Alignments for each domain:
  == domain 1  score: 130.8 bits;  conditional E-value: 2.7e-42
                  HHHCTHHHHTTTTS-HHHHHHHHHSTTH.HHHHTTS-.TTTHHHHHHCTHHHHHHT-EEEEEEEEEEE-STTHHHHHHHHHHHHST.S..TTSSSEEE CS
  EIF_2_alpha   1 lyeevgwklyekyghaydaFklaitdee.vldkleip.eeveeaLveiikkklkpqkvkiradieltcftkdGveaIkeaLkageeasneeeveeeee 96 
                  +y+++gw+ly++yghaydaFklai++ e v++ le p + +++ L+ +i+++l+pq++kirad+e+tcf++dG++aIk+aLk++e+  +ee     ++
   EPX71399.1 126 MYTSIGWPLYRRYGHAYDAFKLAISNAEhVFEGLEAPkPGIIDDLLGQISRRLTPQPIKIRADVEVTCFGYDGINAIKAALKSAEDLRTEE-----VP 218
                  599*********************99999******99799******************************************999888887.....** PP

                  EEEEESSSSEEEEEEEES.. CS
  EIF_2_alpha  97 vkikliapPeYvltvetldk 116
                  +k+kl+apP+Yvl +++ldk
   EPX71399.1 219 IKVKLVAPPLYVLLTNALDK 238
                  *****************997 PP

>> S1  S1 RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.1   3.0   1.1e-15   9.6e-12       2      75 .]      14      88 ..      14      88 .. 0.96

  Alignments for each domain:
  == domain 1  score: 45.1 bits;  conditional E-value: 1.1e-15
                STTTCEEEEEEEEEETTEEEEEET..TTEEEEEEGGGSSSSCEESCHHHCEETTEEEEEEEEEEETTTTEEEEEEC CS
          S1  2 pekgevveGeVtsvtkgGafVelg..ngvegfvpaselsrdarvedpdevlkvGdevkvkvlkvdkdrrriilsik 75
                pe++e v  +V ++ ++Ga+V l+   ++eg+v +selsr+ r+++  ++++vG    v+vl+vdk++++i+ls++
  EPX71399.1 14 PEVDELVVVNVRQIQEMGAYVKLLeyDNIEGMVLLSELSRR-RIRSVQKHIRVGRNEVVVVLRVDKEKGYIDLSKR 88
                6889999999**************999**************.********************************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (306 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       734  (0.0409393); expected 358.6 (0.02)
Passed bias filter:                      520  (0.0290033); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2225.47
//
Query:       EPX71400.1  [L=66]
Description: hypothetical protein SOCG_01618 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      5e-09   35.9   0.1    5.8e-09   35.7   0.1    1.1  1  SH3_9     Variant SH3 domain
    1.9e-07   30.6   0.0    2.3e-07   30.3   0.0    1.1  1  SH3_1     SH3 domain
    0.00048   19.8   0.0    0.00055   19.6   0.0    1.1  1  SH3_2     Variant SH3 domain


Domain annotation for each model (and alignments):
>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.7   0.1   9.6e-13   5.8e-09       1      49 []      11      64 ..      11      64 .. 0.94

  Alignments for each domain:
  == domain 1  score: 35.7 bits;  conditional E-value: 9.6e-13
       SH3_9  1 AlypyepreddeLsLqrGDvitvieesedgWlegsl...tG..rtGlvPanyve 49
                A++p+    +d L++++G+vi v+ ++edgWl+g++   +G  + G +P+++++
  EPX71400.1 11 AVFPFRSSFTDDLEFDPGQVIDVLTQYEDGWLFGTYvdaDGvpKQGSFPSTFTQ 64
                89*********************************55589999********986 PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.3   0.0   3.8e-11   2.3e-07       1      48 []      10      60 ..      10      60 .. 0.93

  Alignments for each domain:
  == domain 1  score: 30.3 bits;  conditional E-value: 3.8e-11
                EESSSBEXSSTTBXEBSTTEEEEEEEECSSSEEEEEETTS...TEEEEEEG CS
       SH3_1  1 iAlYDYeaeesdELsfkkGDviivleksedgWwkgrlkgt...gkeGliPs 48
                +A +++  + +d+L f +G vi vl + edgW++g + +     k+G +Ps
  EPX71400.1 10 VAVFPFRSSFTDDLEFDPGQVIDVLTQYEDGWLFGTYVDAdgvPKQGSFPS 60
                699*********************************999887878999997 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   9.2e-08   0.00055       1      55 [.       8      64 ..       8      66 .] 0.86

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 9.2e-08
                EEEESS-B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEE...CCCE..EEEEGCGEE CS
       SH3_2  1 yvraiedyvgedkseLsfkkGdvikvlslgskdsdgwwegev...gGrv..GlfPsslve 55
                +v+a++ + ++ ++ L+f  G+vi vl    +  dgw +g++   +G+   G fPs++ +
  EPX71400.1  8 RVVAVFPFRSSFTDDLEFDPGQVIDVL---TQYEDGWLFGTYvdaDGVPkqGSFPSTFTQ 64
                5899***********************...89999*****88666565566999998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       186  (0.0103743); expected 358.6 (0.02)
Passed bias filter:                      172  (0.0095934); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.31u 0.25s 00:00:00.56 Elapsed: 00:00:00.37
# Mc/sec: 529.68
//
Query:       EPX71401.1  [L=241]
Description: exosomal 3'-to-5' phosphorolytic exoribonuclease Ski6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.1e-33  114.1   0.0      9e-33  113.6   0.0    1.3  1  RNase_PH    3' exoribonuclease family, domain 1
    3.1e-11   43.2   0.4    1.1e-10   41.4   0.3    1.9  2  RNase_PH_C  3' exoribonuclease family, domain 2
  ------ inclusion threshold ------
      0.061   13.3   0.0       0.11   12.5   0.0    1.4  1  DUF2000     Protein of unknown function (DUF2000)


Domain annotation for each model (and alignments):
>> RNase_PH  3' exoribonuclease family, domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.6   0.0   1.5e-36     9e-33       1     132 []      20     150 ..      20     150 .. 0.89

  Alignments for each domain:
  == domain 1  score: 113.6 bits;  conditional E-value: 1.5e-36
                 EEEEEEEEESSSSTTSEEEEEEECCEEEEEEEEEEEEEE-TCC.G.--CCEEEECCCCECCCCEC-C...S...HHHHHHHHHHHHHHCCTC-CCGCCT CS
    RNase_PH   1 elRslsietgvlsqanGSaylelGdtkvlasvtgpieerpsee.r.ddaegaldveveyapfasgerrregrpsdeeielsrlleralrpsillekkpk 97 
                 e+R++++ +gv ++ nGS+++++G+t v++ ++gp+e++++ + r d+a   ++v++++apf++ +r+r+ + +++ ++ + +l+r++++++ +e +pk
  EPX71401.1  20 EMRNFFCRIGVEPSENGSSIIQYGNTRVMCIINGPSEPTIKSKsRaDRAF--INVDINIAPFSTIDRKRRFKSDRRIQLQCLALQRTFEQVVQVELYPK 116
                 79**********************************99544440335555..***************8865566666666779**************** PP

                 CEEEEEEEEEECCCS-CHHHCHHHHHHHHHCTCEE CS
    RNase_PH  98 stididitvlssdggslldalinaaslALadagip 132
                 s++ i ++vl +dg  + + ++naa+lAL+dagip
  EPX71401.1 117 SQVSICLHVLHDDG-AVVATCMNAATLALMDAGIP 150
                 **************.*******************9 PP

>> RNase_PH_C  3' exoribonuclease family, domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.4   0.3   1.8e-14   1.1e-10       2      64 ..     154     214 ..     153     217 .. 0.93
   2 ?    3.5   0.0     0.012        74      25      46 ..     205     226 ..     200     231 .. 0.84

  Alignments for each domain:
  == domain 1  score: 41.4 bits;  conditional E-value: 1.8e-14
                 --EEEEEEEETTEEEES--HHHHHHSSEEEEEEEETTSEEEEEEEECSSCEEHHHHHHHHHHH CS
  RNase_PH_C   2 pviavtvgkvddqfvlDptkeEedlsegdltlavagtkevvtlmkeggsqldeetlleaielA 64 
                 +v++ t g++d +++lD++  Ee+   + +t+av gtk++vt m+++ + ++ + l+ ++ +A
  EPX71401.1 154 YVCCSTAGIIDSDILLDLNSLEES-DLSWMTVAVMGTKNKVTYMQLETK-MHLDYLESVMNVA 214
                 79******************9998.889*********************.9999999998887 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.012
                 HHSSEEEEEEEETTSEEEEEEE CS
  RNase_PH_C  25 dlsegdltlavagtkevvtlmk 46 
                 d+ e+++++a+ag +++  +m+
  EPX71401.1 205 DYLESVMNVAIAGAEQIYHMMQ 226
                 6889***********9998888 PP

>> DUF2000  Protein of unknown function (DUF2000)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.8e-05      0.11      56     128 ..     124     199 ..     115     204 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.8e-05
                 EEEEE-HHHHHHHHHHHHHT....T---EEEEGGGGG---HHHHHHHHTT--TTT--EEEEEEEEEHHHHHHHCTT CS
     DUF2000  56 pvlkassekLrelrekaler...egltvvdFtdaaqstksyeeyraalaatpeedleyvGialfGpkkavdkltgk 128
                  vl  + +  ++ +++a  +   +g+ ++d++   ++   +++    l++ +e+dl+ + +a++G k++v+ +  +
  EPX71401.1 124 HVLHDDGAVVATCMNAATLAlmdAGIPMTDYVCCSTAGIIDSDILLDLNSLEESDLSWMTVAVMGTKNKVTYMQLE 199
                 566667777777777665555568**********************************************876555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (241 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       550  (0.0306766); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.61u 0.34s 00:00:00.95 Elapsed: 00:00:00.56
# Mc/sec: 1302.55
//
Query:       EPX71402.1  [L=125]
Description: hypothetical protein SOCG_01620 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-17   63.1   0.0    2.8e-17   62.9   0.0    1.0  1  ACPS      4'-phosphopantetheinyl transferase superfamily


Domain annotation for each model (and alignments):
>> ACPS  4'-phosphopantetheinyl transferase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.9   0.0   1.6e-21   2.8e-17       1     113 [.       2     120 ..       2     121 .. 0.88

  Alignments for each domain:
  == domain 1  score: 62.9 bits;  conditional E-value: 1.6e-21
                 EEEEEEEEHHHHH.HHH----...-HHHHHS-HHHHHHHTT.....--HHHHHHHHHHHHHHHHHHHHHTTS-SSSS--GGG-EEEE-TTS-EEEE-S- CS
        ACPS   1 gvGiDieklsrlrkrvkrrga...kilkrifteeErkllks.....sdeearaelfarlWaaKEAllKalgpglrklldfksievledstgrptlells 91 
                 g+GiDi+k+sr+rk ++++     ++l+++++++E+++++       ++++ra+++ ++W++KEA++Kal p    ++ + ++e  ++++g p +++++
  EPX71402.1   2 GIGIDIVKVSRIRKLLEKSKFtetRFLEKCLHPKEIQQYRLlqgpqINQDQRAKWLGVRWSVKEAAFKALQPTH--YIYMPFMEYAHNEQGMPVINIHK 98 
                 79***********66555555999***************998777766666699********************..99999999************999 PP

                 SSEEEEEEEE-....SSEEEEE CS
        ACPS  92 eakkkawkleslkidkdyviav 113
                     +   + s ++d+dy++a 
  EPX71402.1  99 PNVIIPSLSVSISHDGDYIVAN 120
                 988888888888888****996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       482  (0.0268838); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 888.34
//
Query:       EPX71403.1  [L=1487]
Description: CLASP family microtubule-associated protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.7e-77  257.7  13.0    4.8e-69  232.4   0.6    3.4  3  CLASP_N        CLASP N terminal
      0.004   17.2   0.2      0.011   15.8   0.2    1.7  1  MKLP1_Arf_bdg  Arf6-interacting domain of mitotic kinesin-lik
  ------ inclusion threshold ------
      0.035   14.0   0.4        9.8    6.2   0.1    3.4  3  GRIP           GRIP domain


Domain annotation for each model (and alignments):
>> CLASP_N  CLASP N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.6   0.8     8e-11   4.8e-07       4     220 ..       5     206 ..       2     212 .. 0.80
   2 !  232.4   0.6     8e-73   4.8e-69       1     227 []     271     497 ..     271     497 .. 0.99
   3 ?    2.9   0.4     0.011        67      73     199 ..    1324    1450 ..    1268    1472 .. 0.70

  Alignments for each domain:
  == domain 1  score: 29.6 bits;  conditional E-value: 8e-11
     CLASP_N   4 kaeellaafegketelnwdaReknilklrslikgn.vpedaveelleclkqlleailkalssLrttlsstgchllkelaiqlkeqldpmveillptLlk 101
                 +a++l +++    ++ + d + +++ +lrs  + n +p+d  + ++ec+k  + + + + + Lr+++s       + +++ l  q  ++v+  +p+L +
  EPX71403.1   5 DAQNLFQFL---KSDVSTDEKTRQLDNLRSFFNKNnIPNDDLPIYIECFK--VSLATVNPLILRSAVS-----CYETFLRRLRAQCPSWVKFRVPLLKN 93 
                 567777777...89******************9999**************..3333334445666665.....56777777888888999999999999 PP

     CLASP_N 102 llgdtKkiisqnanqalaallsnasfsp.ri.lqvlsvalqdKnvqpReysaiwLkilltrfeshkskleasllldliekslkkgleDanptVRetaRs 198
                 l+ d+   ++   + +l+ ll+  +f+p +i  ++  v++++Kn+++R  +++w ++++++          s  l+++++ l + le a+p+ Re++++
  EPX71403.1  94 LVVDHL-ASRDLRKRILTILLELWQFNPiEIeRSLHHVLSNNKNAEIRMQALKWFALAHRSEL--------SFDLKALRPFLFANLEHADPSLREETKE 183
                 999885.466666777777777777665488899999******************99887777........4445889********************* PP

     CLASP_N 199 tfweffk.vwPsrAksllssldp 220
                 +++ ++k   Ps   +ll +l++
  EPX71403.1 184 LLVLLHKdLSPSTKAHLLRELES 206
                 ***99973557777777777765 PP

  == domain 2  score: 232.4 bits;  conditional E-value: 8e-73
     CLASP_N   1 ldekaeellaafegketelnwdaReknilklrslikgnvpedaveelleclkqlleailkalssLrttlsstgchllkelaiqlkeqldpmveillptL 99 
                 l+++++ +l+ feg+ete+nw+ R++nil++r++++gn+p+++ +ell++lk+ll +il +++sLrttls  +++llke+a +lk+++d ++++llp+L
  EPX71403.1 271 LEQDVAAMLSSFEGRETEQNWSLRQSNILQIRRYMRGNAPDQYLPELLSVLKSLLRGILVSFMSLRTTLSYSAIQLLKEMAFILKNNMDGYLDALLPNL 369
                 7899*********************************************************************************************** PP

     CLASP_N 100 lkllgdtKkiisqnanqalaallsnasfsprilqvlsvalqdKnvqpReysaiwLkilltrfeshkskleasllldliekslkkgleDanptVRetaRs 198
                 lk+++ tK i+sq+an+++a++ls ++  +r lq++s+a++d n+q+R ++++w+++ll  ++  ks+++ s+  +l+ek+++kg++D+n++VRe++R+
  EPX71403.1 370 LKMCSVTKRIVSQAANVTFASILSLCGPLSRTLQFVSLAANDSNAQLRVFASGWISLLLALYPVAKSHIKISANQNLFEKIICKGITDSNSQVRESYRK 468
                 ***************************************************************999999999999************************ PP

     CLASP_N 199 tfweffkvwPsrAksllssldpkvrkale 227
                  fw+f +++P+  + ll++++p+  k+le
  EPX71403.1 469 SFWKFVEYFPNSKEDLLKTFEPSSIKQLE 497
                 ************************99987 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.011
     CLASP_N   73 gchllkelaiqlkeqldpm.veillptLlkllgdtKk.iisqnanqalaallsnasfspri.lqvlsvalq.dKnvqpReysaiwLkilltrfeshk 165 
                  g++ll e +iq  + ++    e  + t+l+   + K+  i ++a   +  +++++   ++  + +  ++lq + + +  + ++ + + +l+rf+   
  EPX71403.1 1324 GLLLLHEYIIQSYQVIEDKrYECAFFTILEKGDQRKDdAIIMAAVEDVVMVIAHVWRAEKSvIFIHDMLLQrQISEKKMALCLLFFAEFLKRFN--- 1417
                  5566666666666665444466655555555555553234444444555555555544444233333333303344444566777788899999... PP

     CLASP_N  166 skleasllldliekslkkgleDanptVRetaRst 199 
                   ++++ l+ +li+++++k +e ++ ++R+++ +t
  EPX71403.1 1418 -EFTHPLMERLIKEVVIKYIEHPDAEIRRATFNT 1450
                  .9999999999*****************986555 PP

>> MKLP1_Arf_bdg  Arf6-interacting domain of mitotic kinesin-like protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.2   1.8e-06     0.011      24      78 ..    1233    1285 ..    1230    1296 .. 0.91

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1.8e-06
  MKLP1_Arf_bdg   24 snvdlgtilqpklkkkksvtkltkpkelalakaskYvLthqeqdsdgeieTkLiK 78  
                     + v+ +  lq +++  k  +  +k+k+++++k s+Y+ t+ e+ ++g+i+ kLiK
     EPX71403.1 1233 NVVPQNKWLQNRMR--KLEKGSSKVKNMDSKKISQYCTTAVEALKNGNISSKLIK 1285
                     66899999****99..788888899999999***********************9 PP

>> GRIP  GRIP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.1    0.0016       9.8       7      41 ..      91     123 ..      91     125 .. 0.95
   2 ?   -2.4   0.0      0.81   4.8e+03       7      25 ..     325     345 ..     322     354 .. 0.77
   3 ?    3.7   0.0    0.0094        56       8      25 ..    1429    1446 ..    1428    1449 .. 0.87

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0016
        GRIP   7 LKNVllqFLeskeaserkqLvpVlstlLkfspeEe 41 
                 LKN ++  L s++   rk+++++l  l +f+p E 
  EPX71403.1  91 LKNLVVDHLASRD--LRKRILTILLELWQFNPIEI 123
                 9************..*****************996 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.81
        GRIP   7 LKNVllqFLeske..aserkq 25 
                 L+ +l+ F++ +     ++ q
  EPX71403.1 325 LRGILVSFMSLRTtlSYSAIQ 345
                 7889*****999865555555 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.0094
        GRIP    8 KNVllqFLeskeaserkq 25  
                  K V+++++e+++a  r++
  EPX71403.1 1429 KEVVIKYIEHPDAEIRRA 1446
                  99**********999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1487 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1069  (0.0596241); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.94u 0.27s 00:00:01.21 Elapsed: 00:00:00.49
# Mc/sec: 9140.96
//
Query:       EPX71404.1  [L=360]
Description: tryptophan-tRNA ligase Msw1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.9e-76  255.4   0.1    9.3e-76  254.9   0.1    1.1  1  tRNA-synt_1b  tRNA synthetases class I (W and Y)
  ------ inclusion threshold ------
       0.17   12.4   1.7       0.94   10.0   1.0    2.7  3  DUF1829       Domain of unknown function DUF1829


Domain annotation for each model (and alignments):
>> tRNA-synt_1b  tRNA synthetases class I (W and Y)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  254.9   0.1     1e-79   9.3e-76       5     292 ..      13     313 ..      11     314 .. 0.94

  Alignments for each domain:
  == domain 1  score: 254.9 bits;  conditional E-value: 1e-79
                   --EEEEEEETSSS-BGG.GHHHHHHHHHHHH.....TTSEEEEEEEHHHHHTTTTT-SSHHHHHHHHHHHHHHHHHHHHHTCHTTTEEEEETHHHHT CS
  tRNA-synt_1b   5 plrvysGidPTgklHlG.ylvplkklvelqk.....aghevffliaDlhAiigdpskaeerklrkreevlenaikaqlakgldpekaevvlqsewle 95 
                     rv+sGi+PTg +H+G yl++l+++++lq+     +  ++ff++aDlhA++ ++    ++++ +r+ ++ ++   +l++g+dp++++v++qs+++ 
    EPX71404.1  13 SARVVSGIQPTGIPHVGnYLGSLRQWTNLQNsvpssSSSQCFFFVADLHALTIPQI---PQDFYQRRMDTLAI---LLSIGIDPQRSTVFFQSDIPY 103
                   579********************************99*******************...**************...********************* PP

                   THHHHHHHHHHHTTCBHHHHHHHHH............CCHHCSSSC--BHHHHHHHHHHHHHHHHTCHSEEEEEGGGHHHHHHHHHHHHHHHHH... CS
  tRNA-synt_1b  96 hlelaellrdlgklgslnrmlqfks............vkkrleegegislgeftYplLqaaDilllkadlvpgGsDQkqnielgrdlarrfnkk... 177
                   h+el++l+ + +++g+lnrm+q+ks             +++++++++++lg+f+Yp+LqaaDill+ a++ p+G+DQ+q+iel+r++ar++n++   
    EPX71404.1 104 HTELNWLMGCHTPMGHLNRMTQWKSklqlhemdavtfLNTSIASSSKFNLGLFSYPVLQAADILLYGATHIPVGKDQSQHIELTRNIARKINSTfkk 200
                   *************************7766666665555556665489***********************************************999 PP

                   STTSS-EEEEET...-BBSTTSSSBTTCETTC..GC-BTTCCHHHHHHHHHHCHCSTTCSHHHHHHHHHTHHHCHHHHHHHHCCSEEESSHHHHHHH CS
  tRNA-synt_1b 178 evfkkpegltvp...lltgldGekKmSKSagn..saIfLddekesvkkkiqkavtdsdeevekllklktelsnelierleavsgkkpkreaeellae 269
                   ++f +p+++++    ++ + ++ kKmSKS++n  ++I L+d++++++kki  a td+ e++++  ++++ ++n li+ + a+s++ p     ++++ 
    EPX71404.1 201 DLFIIPDIIINSsssIMALKQPNKKMSKSDQNskNYILLTDSEQDIRKKITGAATDNIEGITYGDPNRPAINN-LINMTAALSDSRP----TTIAEN 292
                   9*******************************999**************************************.*************....888888 PP

                   HHCCCCHHHHHHHHHHHHHHHHH CS
  tRNA-synt_1b 270 evtklvhggdlkkalaealnell 292
                   ++       ++k+ +a++l ++l
    EPX71404.1 293 FKHA--RHSEFKSFVADSLVNTL 313
                   8888..78888888888877665 PP

>> DUF1829  Domain of unknown function DUF1829
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.62   5.6e+03      34      62 ..      30      60 ..      20      76 .. 0.75
   2 ?   10.0   1.0   0.00011      0.94      51      75 ..     227     255 ..     174     264 .. 0.80
   3 ?   -1.8   0.0      0.52   4.6e+03      31      62 ..     270     308 ..     267     330 .. 0.53

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.62
     DUF1829 34 avkkalfaweDvkearee..nsklyvilnDk 62
                ++  +l +w+  ++  ++  +s+ ++++ D 
  EPX71404.1 30 NYLGSLRQWTNLQNSVPSssSSQCFFFVADL 60
                5666778888888888777788888888886 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00011
     DUF1829  51 e....nsklyvilnDkekkisseiedale 75 
                 +    nsk y++l D+e++i+++i+ a+ 
  EPX71404.1 227 SksdqNSKNYILLTDSEQDIRKKITGAAT 255
                 03356******************998875 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 0.52
     DUF1829  31 nknavkkalfaweDvkearee.......nsklyvilnDk 62 
                   n++ ++  a++D + +  +       +s++  ++ D+
  EPX71404.1 270 AINNLINMTAALSDSRPTTIAenfkharHSEFKSFVADS 308
                 555555555555555544333333334445555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       539  (0.030063); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.47
# Mc/sec: 2278.72
//
Query:       EPX71405.1  [L=748]
Description: transcriptional repressor Sak1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.4e-32  109.5   0.3    2.5e-31  108.1   0.3    1.8  1  RFX_DNA_binding  RFX DNA-binding domain
  ------ inclusion threshold ------
       0.11   13.2   2.4       0.32   11.8   2.4    1.7  1  ELM2             ELM2 domain


Domain annotation for each model (and alignments):
>> RFX_DNA_binding  RFX DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.1   0.3   2.8e-35   2.5e-31       1      78 [.      97     174 ..      97     175 .. 0.97

  Alignments for each domain:
  == domain 1  score: 108.1 bits;  conditional E-value: 2.8e-35
  RFX_DNA_binding   1 qkfalqwlnanfeeaedvsvprqevYaeYlsicsklklkplnaasFgKlirsvFpnvktrRLgtrgqskYhyvGirlk 78 
                      q+f + wl++++e +ed++v+r+++Ya+Y+++c+ +++k+l++asFgKl+r++Fp++ktrRLgtrg+skYhy+G++l+
       EPX71405.1  97 QIFGVCWLKQSCEDQEDAAVQRNQIYAQYVDACNVYHVKTLSSASFGKLVRMLFPTIKTRRLGTRGHSKYHYCGLKLR 174
                      57899**********************************************************************986 PP

>> ELM2  ELM2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   2.4   3.5e-05      0.32       5      50 ..     700     739 ..     700     740 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.5e-05
        ELM2   5 pkYQAeiPdllepeereakeeeekeakvWdPdhnlndrdideylrv 50 
                 pk+Q e+ +l ++ e+ +k    +   vWdP++n+  +  ++y+ v
  EPX71405.1 700 PKFQTEVSPLHPQQEQHNK----PT--VWDPYDNVQKQREEDYMSV 739
                 79**********8855554....44..****999999888888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (748 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       500  (0.0278878); expected 358.6 (0.02)
Passed bias filter:                      348  (0.0194099); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.29s 00:00:00.92 Elapsed: 00:00:00.48
# Mc/sec: 4721.57
//
Query:       EPX71406.1  [L=250]
Description: rRNA processing protein Fcf2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-36  124.2   0.6    5.9e-36  122.8   0.2    1.9  2  Fcf2      Fcf2 pre-rRNA processing


Domain annotation for each model (and alignments):
>> Fcf2  Fcf2 pre-rRNA processing
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.26   4.7e+03      45      55 ..      51      61 ..      31      93 .. 0.61
   2 !  122.8   0.2   3.3e-40   5.9e-36       2      96 .]     128     221 ..     127     221 .. 0.98

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.26
        Fcf2 45 kkkklPkyfqv 55
                ++++lPk+  v
  EPX71406.1 51 QTNELPKQAWV 61
                34455554444 PP

  == domain 2  score: 122.8 bits;  conditional E-value: 3.3e-40
        Fcf2   2 kktagkkWfnlpkteltpelkrdlqlLklrnvldpkrfyKkedkkkklPkyfqvGtivegetefysarltrkerkrtlveellkdeeakkyakrK 96 
                 k+tag +Wf++p+telt+++krd+qlL++rnvldpkr+y++e+ +k +Pkyfq Gtiveg+++++s r+ ++er+ t+ +el+++ e ++y+k+K
  EPX71406.1 128 KDTAGGDWFDMPATELTESVKRDIQLLRMRNVLDPKRHYRREN-TKHMPKYFQTGTIVEGPQDYFSGRIANRERQPTITDELVHNTERRNYFKKK 221
                 799***************************************5.**************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       817  (0.0455686); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 1693.97
//
Query:       EPX71407.1  [L=158]
Description: TRAPP complex subunit Bet5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-21   76.2   0.1      3e-21   75.8   0.1    1.1  1  Sybindin  Sybindin-like family


Domain annotation for each model (and alignments):
>> Sybindin  Sybindin-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.8   0.1   1.7e-25     3e-21       1     142 [.       3     151 ..       3     152 .. 0.89

  Alignments for each domain:
  == domain 1  score: 75.8 bits;  conditional E-value: 1.7e-25
    Sybindin   1 ifslyiinkaGgliyqkeaneekkea.........rpklstneklllasmlhslkaiasklspvkakeelqgssgievletdtfkLhclqtltGiKfvl 90 
                 +++ yi++++  +++ + ++   +++          ++ +++ ++l++++++sl+ ++ k+s         g   + ++ t+++kLh+++t+t +++v 
  EPX71407.1   3 VYAFYIFSRKNECVFAHRWKPADANSmetlvsqleSTAFEDDVEKLIFGVIFSLRNLVRKVSN--------GADEFLSYTTSQYKLHFYETPTNLRLVF 93 
                 7999***************98776668899999977778888899*****************9........5667************************ PP

    Sybindin  91 itdtktnaeadsllrkiyelYsdyvlknPfyslemp......ircelFdeklkelles 142
                 it+++++  + +l+++++ lY ++v+k P+y+   p      i ce+F+  l++++++
  EPX71407.1  94 ITSPRVEPLTHVLHQIYATLYIEFVVKHPLYTQVPPplekggINCEMFRITLDKFVRT 151
                 *******************************85333344445*************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       479  (0.0267165); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.28s 00:00:00.72 Elapsed: 00:00:00.44
# Mc/sec: 1089.97
//
Query:       EPX71408.1  [L=112]
Description: hypothetical protein SOCG_01626 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.7e-08   33.6   2.8    4.5e-08   33.3   2.8    1.3  1  DUF4499   Domain of unknown function (DUF4499)


Domain annotation for each model (and alignments):
>> DUF4499  Domain of unknown function (DUF4499)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.3   2.8   2.5e-12   4.5e-08      36      89 ..      47     100 ..      15     101 .. 0.87

  Alignments for each domain:
  == domain 1  score: 33.3 bits;  conditional E-value: 2.5e-12
     DUF4499  36 qtllrlgfvlavliHvlEalyalklckkkgisnaaalkWflqTlllGfaSlrlL 89 
                 ++ l+  +++ + +H lEa+ al+ c  k++s+a++l W+++ +++G ++l++L
  EPX71408.1  47 PKFLYGSVYFLIFAHSLEAFLALRACLAKKLSFATTLGWVVSVFIYGAPTLMML 100
                 67889999*******************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       377  (0.0210274); expected 358.6 (0.02)
Passed bias filter:                      223  (0.0124379); expected 358.6 (0.02)
Passed Vit filter:                         9  (0.00050198); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 793.52
//
Query:       EPX71409.1  [L=465]
Description: lysine methyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.1e-12   46.8   3.4    4.1e-12   46.8   3.4    2.0  2  SET             SET domain
  ------ inclusion threshold ------
      0.064   13.0   6.9       0.14   11.9   6.9    1.6  1  Pox_Ag35        Pox virus Ag35 surface protein
       0.13   11.9   4.8       0.31   10.7   4.8    1.6  1  FAM176          FAM176 family
        1.6    8.1  10.1        2.4    7.5  10.1    1.2  1  CobT            Cobalamin biosynthesis protein CobT
        5.5    6.0  13.1        7.7    5.6  13.1    1.2  1  Astro_capsid_p  Turkey astrovirus capsid protein


Domain annotation for each model (and alignments):
>> SET  SET domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.8   3.4   1.1e-15   4.1e-12       1     169 []      43     297 ..      43     297 .. 0.64
   2 ?   -2.6   0.0       1.7   6.1e+03      59      59 ..     387     387 ..     323     459 .. 0.47

  Alignments for each domain:
  == domain 1  score: 46.8 bits;  conditional E-value: 1.1e-15
                 SCEEEESSXBXTTXEEEEEEECCEECHHHHHHHHHH...........................HTEEEEEXGGXX..GGSX.HHHHHHHTTSSHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...........................xxxxxxxxxxxx..xxxx.xxxxxxxxxxxxxxxxx RF
         SET   1 GrGvfAtedIpkgeficeypeeiiltkdeadksele...........................aylfslpeapkn..laft.kelakasastllqklak 69 
                 G G +A +dI+++e ++ + +  +l+  ++++ +                             +yl+  p+++    ++f+ +e+ k  +s+ + ++++
  EPX71409.1  43 GIGFVAAQDIKEDEELVTFSKQNVLCLSNSELAKIPevvalpgwaallltmayenskpdsfwrPYLDVFPSTDRItsPFFWeEEKKKKLLSGTVLESNQ 141
                 7899*************9997778888888877777899999999999999888888888888888887766444775555555555555555555555 PP

                 HHHHHHHHHHH..HTHHHHHHHXTTTSXXXHCCCCCHCCCHEEEE.....................TEEEEEECCC....................... CS
                 xxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....................xxxxxxxxxx....................... RF
         SET  70 dqkqaekedtd..aalkasskaesdlnaskpeagafsaiagysid.....................aralksgnga....................... 122
                 d k+  + + +  + +k+++    + ++++  a+ ++    ys+d                     +        +                       
  EPX71409.1 142 DYKEINDLWKNsiDPIKQQYPDLFSNVSFDDYARMAAVMLAYSFDtkkpatkeekdnskeisnkspT--------Skeieengeskkeedgdddddddr 232
                 5554444443300333333333333333333333334444444444444333333222222222220........023333333344444445555555 PP

                 .....................GTTGGGCEEXSSSSEEEEEEEETTSSEEEEEESSXBXTTEEEEEXTT CS
                 .....................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         SET 123 .....................gplarflNHsCdpNcnltvqnvlrgprvavfAtrdIkkGeEltidYg 169
                                      +p+a+++N + d  cn+++++   ++r++++A+rdIk+Ge++ ++Yg
  EPX71409.1 233 seeedsdveseydpeqfeksmCPVADMFNGD-DELCNIRLYD--LEDRLTMIACRDIKAGEQVWNTYG 297
                 5566666688999999999**********76.8899889999..9**********************8 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.7
                 H CS
                 x RF
         SET  59 s 59 
                 s
  EPX71409.1 387 S 387
                 2 PP

>> Pox_Ag35  Pox virus Ag35 surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   6.9     4e-05      0.14      43     102 ..     186     244 ..     134     267 .. 0.55

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 4e-05
    Pox_Ag35  43 DieiPspkqekkkrattprkkpakkekkkkeeekeeaaeeeeledseed....eenendedese 102
                 D + P++k+ek +      k+ + k+ ++ke e++ + ++ee  d+++d    ee++ d+++  
  EPX71409.1 186 DTKKPATKEEKDN-----SKEISNKSPTSKEIEENGESKKEEDGDDDDDddrsEEEDSDVESEY 244
                 4444444444444.....4444444444444333333333332222222011122222222222 PP

>> FAM176  FAM176 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   4.8   8.5e-05      0.31      53     109 ..     204     265 ..     176     281 .. 0.65

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 8.5e-05
      FAM176  53 rlkkkkkklkee.sekasededeeeeeeeedsseseaeeel..sefertl..svnvftsaee 109
                 +++++ k+ +e+ ++k++ed d++++++++++++s++e+e   ++fe+++   +++f+  +e
  EPX71409.1 204 NKSPTSKEIEENgESKKEEDGDDDDDDDRSEEEDSDVESEYdpEQFEKSMcpVADMFNGDDE 265
                 33333333333302333777777777777777777777776666666665434566666665 PP

>> CobT  Cobalamin biosynthesis protein CobT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5  10.1   0.00067       2.4     192     263 ..     175     244 ..     140     259 .. 0.42

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.00067
        CobT 192 ravrqlLq.dldlaeesaeepeeedeeeeedeeeeeeeseee.eeegedddk.eeqeeaaseeeeeededeeske 263
                 r+++ +L+ + d      ++p +++e+++++e +++++ ++e ee+ge++++ + ++++  +++eeed+d es++
  EPX71409.1 175 RMAAVMLAySFD-----TKKPATKEEKDNSKEISNKSPTSKEiEENGESKKEeDGDDDDDDDRSEEEDSDVESEY 244
                 444433331222.....2333333333333333444443333422222222202222223333333333333332 PP

>> Astro_capsid_p  Turkey astrovirus capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6  13.1    0.0021       7.7     216     285 ..     178     243 ..     113     245 .. 0.55

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0021
                     XXX....XXXX......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXX CS
  Astro_capsid_p 216 eralaegederktgaeeeisdpsdeedeevsdeetdtevesdeDeddevdrfDletsyeSeaeDddvenn 285
                     +++la++ d +k    ++  +++d+ +e  ++  t +e+e++  ++ e+d  D ++   Se+eD+dve++
      EPX71409.1 178 AVMLAYSFDTKK----PATKEEKDNSKEISNKSPTSKEIEENGESKKEEDGDDDDDDDRSEEEDSDVESE 243
                     334445555554....4444444444444455555666666666666666555556667999****9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (465 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1295  (0.0722293); expected 358.6 (0.02)
Passed bias filter:                      592  (0.0330191); expected 358.6 (0.02)
Passed Vit filter:                        93  (0.00518713); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.63u 0.32s 00:00:00.95 Elapsed: 00:00:00.45
# Mc/sec: 3125.83
//
Query:       EPX71410.1  [L=335]
Description: TatD DNase family Scn1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.7e-42  143.1   0.0    1.8e-41  142.2   0.0    1.4  1  TatD_DNase  TatD related DNase


Domain annotation for each model (and alignments):
>> TatD_DNase  TatD related DNase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.2   0.0     1e-45   1.8e-41       2     253 ..       8     333 ..       7     334 .. 0.88

  Alignments for each domain:
  == domain 1  score: 142.2 bits;  conditional E-value: 1e-45
                 EEEE-TTSCCCTTTHHHHHHHHHHTTEEEEEEE-SSGGGHHHHHHHHTT.TTTEEEEE---GGGGGC................................ CS
  TatD_DNase   2 DaHcHldskefeedreeileraeeagvaavvvvgtsskdskavlelakkypnkvyavlGiHPnevde................................ 68 
                 DaHcH+++       +e l+ + e ++++++v+gt++ d+ +v e+a+kyp+kv++++GiHP+ ++                                 
  EPX71410.1   8 DAHCHPTD------TPEDLHIVPELSLGKIIVMGTRPMDQGYVSEIAEKYPEKVIPSFGIHPWFSYLiydpdeitqsdeltikaehykkilspeppddf 100
                 ********......899**********************************************9999999***********************988777 PP

                 ........C.CCHH....HHHHHHHHCCCTSEEEEEEEEEET........-CCCCCGH...........HHHHHHHHHHHHHHHHTTEEEEEEEES-HH CS
  TatD_DNase  69 ........asedll....eelkelanvkhskvvaiGeiGLDy........ysreestk...........eaqeevFeeqlrlAkelklplviHlrkaee 136
                              +    e l +l  + + +++++GeiGLD+        y++++s +           e+q +vFe qlrlA+++++ +++H++++++
  EPX71410.1 101 irelpqpiS----IsslsEILSQL--ILKHPTALVGEIGLDKpfrlpvgpYDARSSLPqgplsphyvrmEHQIKVFEFQLRLASKYQRTVSVHSVQTYT 193
                 776644432....23333566666..5666788*********999998887777676689999999999****************************** PP

                 HHHHHH..........................HHCGGCCS..EEEETT--S-HHHHHHHH.HT...TEEEEE-GGGGTTTTHHHHHHHHHS-GGGEEE- CS
  TatD_DNase 137 dlleil..........................keaaeaka..kvvlHsfsgsaeeakkfl.kl...gyyislsglltfknakelrelvkavpldrlLiE 203
                  ++++l                          +e ++++   k+++Hs+sgs ++++ f+ ++   ++y s+s  ++ +  k+++e++++ p+dr+L E
  EPX71410.1 194 YIYDVLsklweghwipsksqlrkykpgeyesiREGQKQNYppKICFHSYSGSGQQISLFSaHKvptDFYYSFSTGINSRY-KKMDETIRSAPDDRILPE 291
                 999999999******************9988733333333669*****************7779**77777777777644.77**************** PP

                 --TTSSEECCCTT.SE--GGGHHHHHHHHHHHHTS-HHHHHHHHHHHHHHH CS
  TatD_DNase 204 TDaPyltpkpyrg.krnepanvayvveklaelkaltleelaeitaeNakrl 253
                 +D+         + ++  ++ v++++ ++a++k+++ e+   i+++N   +
  EPX71410.1 292 SDH---------HsASTLDKLVEESISAIAKAKSWSQEDAMSILSKNCSSF 333
                 **6.........33999******************************8765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (335 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       552  (0.0307881); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 2187.23
//
Query:       EPX71411.1  [L=162]
Description: hypothetical protein SOCG_01629 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00057   20.0   2.9       0.14   12.2   1.0    2.1  2  UPF0242   Uncharacterised protein family (UPF0242) N-terminus
  ------ inclusion threshold ------
      0.013   14.9   0.5       0.02   14.2   0.5    1.3  1  S_4TM     SMODS-associating 4TM effector domain
      0.065   13.8   0.9        0.1   13.1   0.3    1.5  2  DUF2418   Protein of unknown function (DUF2418)
      0.089   12.3   1.5          1    8.9   0.5    2.1  2  SieB      Super-infection exclusion protein B
        0.2   12.0   0.3        0.2   12.0   0.3    1.9  2  DUF2929   Protein of unknown function (DUF2929)
       0.22   11.3   1.0       0.68    9.8   0.1    2.1  2  Vpu       Vpu protein


Domain annotation for each model (and alignments):
>> UPF0242  Uncharacterised protein family (UPF0242) N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.0    0.0012       3.7      38      69 ..      21      52 ..      20      61 .. 0.89
   2 !   12.2   1.0   4.7e-05      0.14      34      96 ..      92     160 ..      78     162 .] 0.80

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0012
     UPF0242 38 iGlllaaaGsLlllllllkwekalkekleksk 69
                iGl ++++GsL+ ll +++ ++ lk+k+  s+
  EPX71411.1 21 IGLVVIVIGSLINLLHVYQTKEGLKTKYHVSF 52
                8**********************999987665 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 4.7e-05
     UPF0242  34 sllsiGlllaaaGsLlllllllkwekalkeklekskleekeaklteld......eglktkeealeelqe 96 
                 +ll++ l + a+ sL l++  + +e+  k+k + + l e+ +kl++++      ++ k+k   l+++++
  EPX71411.1  92 TLLTFDLAIFAITSLALIITWKLFEQLCKNKDDDKRLTEQREKLKAQKtrdqskPDNKKKPSDLKKRKK 160
                 799***************999999999999999999999999999998666655555555557777666 PP

>> S_4TM  SMODS-associating 4TM effector domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.5   6.7e-06      0.02     178     249 ..      79     149 ..      77     162 .] 0.86

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 6.7e-06
       S_4TM 178 illvlvvgliknlslsdlllsvivpllpllllalkeyreqresakelerlkeeiesllndaasgkleeeelk 249
                 i+ +++++++++l+l ++ l++++ +  +l++++k + + ++  +  +rl+e+ e+l ++ ++ ++++++ k
  EPX71411.1  79 IIKMVITFILSQLTLLTFDLAIFAITSLALIITWKLFEQLCKNKDDDKRLTEQREKLKAQKTRDQSKPDN-K 149
                 677899*************************************************999998888877765.2 PP

>> DUF2418  Protein of unknown function (DUF2418)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       2.8   8.2e+03      41      60 ..      20      39 ..       7      42 .. 0.57
   2 ?   13.1   0.3   3.4e-05       0.1       8      66 ..      59     122 ..      58     131 .. 0.77

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 2.8
     DUF2418 41 tlllvvllslqlylliskfe 60
                ++ lvv++   l  l + ++
  EPX71411.1 20 FIGLVVIVIGSLINLLHVYQ 39
                44455555555555555555 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 3.4e-05
     DUF2418   8 vWdpskfslrlftlFsPlhvlllvlll...sesvlktll..lvvllslqlylliskfeqqikDk 66 
                 +W+p +++  + +  sP  +++ ++++   s+ +l t+   + +++sl l ++ + feq+ k+k
  EPX71411.1  59 KWSPFSINRDIPCNVSPKEIIIKMVITfilSQLTLLTFDlaIFAITSLALIITWKLFEQLCKNK 122
                 7*****************999988877776444444443345556777777777*****99876 PP

>> SieB  Super-infection exclusion protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0     0.037   1.1e+02      32      54 ..      18      40 ..       6      52 .. 0.72
   2 ?    8.9   0.5   0.00033         1      14      76 ..      74     136 ..      72     141 .. 0.91

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.037
        SieB 32 glwiglvflisiayllaqvvskl 54
                + +iglv++++ +++    v+  
  EPX71411.1 18 KDFIGLVVIVIGSLINLLHVYQT 40
                679*****999998766666555 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00033
        SieB  14 lPdslleklnlgkfleeyglwiglvflisiayllaqvvskllaeikekikkkreqkkvekklk 76 
                 +P++++ k+ +   l++  l  +  ++++i  l  ++ +kl++ +++  + +++ +++++klk
  EPX71411.1  74 SPKEIIIKMVITFILSQLTLLTFDLAIFAITSLALIITWKLFEQLCKNKDDDKRLTEQREKLK 136
                 79999999989988888899999999************************9999999999997 PP

>> DUF2929  Protein of unknown function (DUF2929)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.5      0.52   1.6e+03      41      52 ..      21      32 ..      20      38 .. 0.75
   2 ?   12.0   0.3   6.6e-05       0.2      14      43 ..      81     110 ..      78     123 .. 0.78

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.52
     DUF2929 41 fgvlviliiali 52
                +g++vi+i+ li
  EPX71411.1 21 IGLVVIVIGSLI 32
                577788877776 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 6.6e-05
     DUF2929  14 gevvgYIgsaLtgvtydfttalilavvfgv 43 
                   v+++I+s+Lt  t+d    +i ++ + +
  EPX71411.1  81 KMVITFILSQLTLLTFDLAIFAITSLALII 110
                 569**************8888877766544 PP

>> Vpu  Vpu protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.1       0.3     9e+02       5      20 ..      19      34 ..      17      42 .. 0.81
   2 ?    9.8   0.1   0.00023      0.68       7      49 ..      96     138 ..      78     158 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.3
         Vpu  5 eliglialivaliiai 20
                + igl+++++  +i+ 
  EPX71411.1 19 DFIGLVVIVIGSLINL 34
                5689999999988875 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00023
         Vpu   7 iglialivaliiaivvWtivyreykkikkqkeierlikrirer 49 
                   l ++++  ++ i+ W++  + +k++  +k++ +  ++++  
  EPX71411.1  96 FDLAIFAITSLALIITWKLFEQLCKNKDDDKRLTEQREKLKAQ 138
                 568899999999*********************9999998654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1905  (0.106252); expected 358.6 (0.02)
Passed bias filter:                      751  (0.0418874); expected 358.6 (0.02)
Passed Vit filter:                        71  (0.00396006); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 1128.89
//
Query:       EPX71412.1  [L=1081]
Description: huntingtin-interacting protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      8e-78  261.2   0.0      8e-78  261.2   0.0    3.6  4  ANTH        ANTH domain
    5.9e-54  182.5   7.8    5.9e-54  182.5   7.8    6.5  6  I_LWEQ      I/LWEQ domain
  ------ inclusion threshold ------
      0.031   14.6   0.1      0.031   14.6   0.1    3.4  3  PSII_Pbs27  Photosystem II Pbs27


Domain annotation for each model (and alignments):
>> ANTH  ANTH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  261.2   0.0   1.3e-81     8e-78       2     267 ..      17     271 ..      16     278 .. 0.97
   2 ?   -6.6   5.3         3   1.8e+04     135     173 ..     360     401 ..     343     420 .. 0.55
   3 ?   -1.9   0.6      0.21   1.3e+03      97     148 ..     464     513 ..     437     565 .. 0.58
   4 ?    1.6   5.1     0.019   1.1e+02      74     171 ..     576     673 ..     566     682 .. 0.73

  Alignments for each domain:
  == domain 1  score: 261.2 bits;  conditional E-value: 1.3e-81
                 HHHHHHHHT-SSS---HHHHHHHHHHHCSTTS-HHHHHHHHHHHCTSS.SHHHHHHHHHHHHHHHHHS-CHHHHHHHHTT-----TT---TSHHHSTHH CS
        ANTH   2 levavvKAtshdevPpkekhvreilvltssrekvaalvwalsrrlkltrnwvvalKaLilvHklLreGhpsveqellsarrrisellnlssfddsssks 100
                 l ++v+KAts de++pk+khvr+++v+t++ ++ a+ +w  ++ ++l +++++++KaLi+vH++L+eGh+s++++++ +r +++ +++      + +  
  EPX71412.1  17 LVTSVRKATSVDETAPKRKHVRSCIVFTWD-HHTAKPFWVAVKVQPLFASEIQTFKALITVHRVLQEGHRSALKDSQPERGWLKTCARQFP---GGEGM 111
                 5689**************************.*********************************************************888...6799* PP

                 HHHHHHHHHHHHHHHHHHHHHHHHSS-...CCCS--S.....TTSHCC...C--HHHHHHHHHHHHHHHHHHHTT---GGG--SHHHHHHHHHHHHHHH CS
        ANTH 101 wdysafiraYakyLderlefhrklkvdkgelereeegslvavedpner..ktlsmeklldkieklqklldrllkckptgnalsnevilaalvllvkesl 197
                 ++ys +ir Y++yL ++l fh++++ ++g++e++e++sl++v+dpne+  +  +m++l+d+i+++qk++++++k     ++ +ne++++alv+lv+es+
  EPX71412.1 112 KGYSGLIRDYVDYLLDKLAFHSQHPEFNGTFEYKEYISLRQVDDPNEGyeTVYDMMNLQDHIDDFQKQIFSSFK-----RSSKNECRISALVPLVQESY 205
                 *************************************************999**********************.....9999**************** PP

                 HHHHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT--GGG..S--GGGS-CHH CS
        ANTH 198 klYkaineglinLlekffelskheadkaldiykrfskqfeelkeFyevckslgilrsle.iPelekippnl 267
                 ++Y++++++l++L++ + +     ad+++++ +r+++q+++l++Fy +c++l++l+sl+ +P+l++ pp+l
  EPX71412.1 206 GIYRFLISMLRALYKTIDA-----ADTLEPLKQRYKSQHHRLRQFYADCSNLRYLTSLIsVPRLPHEPPDL 271
                 **************99999.....9********************************************95 PP

  == domain 2  score: -6.6 bits;  conditional E-value: 3
                 --S.....TTSHCC.....C--HHHHHHHHHHHHHHHHHHHTT CS
        ANTH 135 eegslvavedpner....ktlsmeklldkieklqklldrllkc 173
                 +++ l+a++ ++++    k    ++ + + + lq+++++  + 
  EPX71412.1 360 RQR-LAAQQHQQAMeaiqKAQMDQQRVAQEQMLQQQMQMQSQG 401
                 333.333333333335432223334455666677777766554 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 0.21
                 STHHHHHHHHHHHHHHHHHHHHHHHHHHSS-...CCCS--S.....TTSHCC CS
        ANTH  97 sskswdysafiraYakyLderlefhrklkvdkgelereeegslvavedpner 148
                 +  ++ y a+ + Y+++ +e l+  +k k+ +  l+ ++ ++ + +++  er
  EPX71412.1 464 NTWKSKYEALAKLYTQLRQEHLDLLTKYKQLQ--LKANSAQEAIEKKERMER 513
                 34456777777777777777777777777763..333333322222222222 PP

  == domain 4  score: 1.6 bits;  conditional E-value: 0.019
                 HHHHHHTT-----TT---TSHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHSS-...CCCS--S........TTSHCC.C--HHHHHH.HHHHHHHHHH CS
        ANTH  74 eqellsarrrisellnlssfddssskswdysafiraYakyLderlefhrklkvdkgelereeeg...slvavedpnerktlsmeklld.kieklqklld 168
                 ++++ ++ ++++e+l++++ ++++s+ +  s+   +Y k+L+e+ e  + +k     ++++  +       ++d ++ +++++++ll+ ++ekl+++++
  EPX71412.1 576 LNRYNREVTQLEESLRMRD-QEMESLRQELSTSEAQYRKLLQEKEEEVEIQKAA---VDESLLQlknLQLDRSDVDQAMDSQIDDLLKsQLEKLSDIVN 670
                 5566777788888899999.77899********************998777766...333333311122223333333599999999736999999999 PP

                 HHH CS
        ANTH 169 rll 171
                 ++l
  EPX71412.1 671 SVL 673
                 887 PP

>> I_LWEQ  I/LWEQ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?  -11.5  21.0         3   1.8e+04      49     138 ..     343     439 ..     338     453 .. 0.50
   2 ?   -4.0   5.3       2.7   1.6e+04      72     132 ..     471     528 ..     427     544 .. 0.55
   3 ?   -3.0   6.7       1.3   7.7e+03      67     130 ..     565     628 ..     546     643 .. 0.70
   4 ?    1.4   0.6     0.058   3.5e+02      75     138 ..     764     820 ..     742     833 .. 0.59
   5 ?    2.2   4.8     0.032   1.9e+02      39      98 ..     850     914 ..     814     923 .. 0.81
   6 !  182.5   7.8   9.9e-58   5.9e-54       1     153 []     929    1077 ..     929    1077 .. 0.98

  Alignments for each domain:
  == domain 1  score: -11.5 bits;  conditional E-value: 3
      I_LWEQ  49 vaastaqLvvasrvKadknskslkrLeaaskaVkkatkelvkavkeakekqeeee..s.....eeeeldisklslvqakrqemeaqvkilklekeLe 138
                 +aa+   L +   + ++++  + ++ ++a +a++ka  +  + ++e+  +q+ ++  +      e+++  +k +l q+     +  +++ +le+eL+
  EPX71412.1 343 IAAQQQSLAAQQAAEMERQRLAAQQHQQAMEAIQKAQMDQQRVAQEQMLQQQMQMqsQgqlagMEQQVAATKAQLEQSNMLLHQYDARVRALENELN 439
                 5555555555555555555555555555555555555444444444433333333221334444455555555555555555555555555555555 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 2.7
      I_LWEQ  72 krLeaaskaVkkatkelvkavkeakekqeeeeseeeeldisklslvqakrqemeaqvkilk 132
                 ++L +   ++++   +l+ + k+ + k++++   +e +++++  + + k + +e    il+
  EPX71412.1 471 EALAKLYTQLRQEHLDLLTKYKQLQLKANSA---QEAIEKKERMEREIKSKNLELADMILE 528
                 3444444444444444555555555444443...444555555555555555555555544 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 1.3
      I_LWEQ  67 nskslkrLeaaskaVkkatkelvkavkeakekqeeeeseeeeldisklslvqakrqemeaqvki 130
                 +s++ ++L++  +  ++ + +l ++ ++ +++ e+ ++e ++ + +  +l q k +e+e q++ 
  EPX71412.1 565 ESNKSAELSNLLNRYNREVTQLEESLRMRDQEMESLRQELSTSEAQYRKLLQEKEEEVEIQKAA 628
                 4555556666666666666666666666665555544445677889999999999999998764 PP

  == domain 4  score: 1.4 bits;  conditional E-value: 0.058
      I_LWEQ  75 eaaskaVkkatkelvkavkeakekqeeeeseeeeld.isklslvqakrqemeaqvkilklekeLe 138
                  + s ++ ++t++l+  +k+  ++  ++ +   ++d  +k+ +v  k  e++++ +      +L+
  EPX71412.1 764 DQGSDQLVSQTRQLIDLAKRFLSSLYSHST--VHMDvDQKTDMVINKNVEIQQRLQ------HLS 820
                 556777888899999999999888777532..234411333444444455554444......333 PP

  == domain 5  score: 2.2 bits;  conditional E-value: 0.032
      I_LWEQ  39 eeeLivaakevaastaqLv.vasrvKadknskslk....rLeaaskaVkkatkelvkavkeakek 98 
                  ++L  +a++v++++ +L+  a++ K  + s+s       L aas a+++a+++l+ka+ + +++
  EPX71412.1 850 DKQLAETANAVQNAILKLQgLAAQPKNINLSPSELqvhdSLLAASIAITEAIARLIKAATASQAE 914
                 568899999999999999866888888877777654555899****************9887655 PP

  == domain 6  score: 182.5 bits;  conditional E-value: 9.9e-58
      I_LWEQ    1 ykknsqWteGLisAAkaVaaaanlLveaadavvqgkakeeeLivaakevaastaqLvvasrvKadknskslkrLeaaskaVkkatkelvkavkeake 97  
                  ykk+++WteGLisAAkaVa+a+ +L+e+ad+v++gka++e+Liva++ vaa+taqLv+asrvKa+  sk++++Le+a+kaV++a+k+lv++v++++ 
  EPX71412.1  929 YKKHNRWTEGLISAAKAVARATVTLIETADGVINGKASFEHLIVASNGVAAATAQLVAASRVKANFASKTQDHLEEAAKAVTDACKALVRQVETMAL 1025
                  9***********************************************************************************************8 PP

      I_LWEQ   98 kqeeeeseeeeldisklslvqakrqemeaqvkilklekeLeearkkLaeirkakYr 153 
                  +++e     e+ d+s+l +++++rqeme+qv+ilk+e+eL  ar++L ++rk +Y+
  EPX71412.1 1026 RSKE----MEHEDFSNLGVHEYRRQEMEQQVQILKIENELVGARRRLFDMRKTSYH 1077
                  8777....5789*******************************************8 PP

>> PSII_Pbs27  Photosystem II Pbs27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.1   5.2e-06     0.031      19      88 ..     398     471 ..     361     482 .. 0.76
   2 ?   -1.0   0.1      0.35   2.1e+03      20      69 ..     501     600 ..     483     614 .. 0.58
   3 ?   -3.8   5.3       2.5   1.5e+04      18      63 ..     971    1020 ..     883    1054 .. 0.61

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 5.2e-06
  PSII_Pbs27  19 savgaiaslfdpnektkadka....lpkaYlkdarevvktlres.leldkkddakreraakaakesireyvskYr 88 
                 +++g++a +++++  tka+      l+ +Y + +r++ ++l++s l+l+  ++ +  + +++++ +i+ + skY 
  EPX71412.1 398 QSQGQLAGMEQQVAATKAQLEqsnmLLHQYDARVRALENELNQSgLNLQD-QMHQNDDLIDSLRSQINTWKSKYE 471
                 3444444444444444433334555*****************99688888.99*********************5 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.35
  PSII_Pbs27  20 avgaiaslfdpnektkadka......................................................lpkaYlkdarevvktlresleldkk 64 
                 a++ai++++  + ++k+ ++                                                      l++ Y ++    v +l+esl +  +
  EPX71412.1 501 AQEAIEKKERMEREIKSKNLeladmilerdrarheldsmqrsqrdkqetserelrllqdkarslesnksaelsnLLNRYNRE----VTQLEESLRMRDQ 595
                 5555555555555555555555555555555555555555555555555555556666666666666667555555555555....4456666666665 PP

  PSII_Pbs27  65 ddakr 69 
                 +++++
  EPX71412.1 596 EMESL 600
                 55554 PP

  == domain 3  score: -3.8 bits;  conditional E-value: 2.5
  PSII_Pbs27   18 a....savgaiaslfdpnektkadka.lpkaYlkdarevvktlresleldk 63  
                       ++++a a+l++ +  +ka++a  +++ l++a + v +  ++l  ++
  EPX71412.1  971 IvasnGVAAATAQLVA-ASRVKANFAsKTQDHLEEAAKAVTDACKALVRQV 1020
                  0333355555555553.5555555554445555555555544444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1081 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3573  (0.199286); expected 358.6 (0.02)
Passed bias filter:                      561  (0.0312901); expected 358.6 (0.02)
Passed Vit filter:                       134  (0.00747392); expected 17.9 (0.001)
Passed Fwd filter:                        38  (0.00211947); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.57u 0.42s 00:00:01.99 Elapsed: 00:00:00.59
# Mc/sec: 5522.22
//
Query:       EPX71413.1  [L=1489]
Description: DNA polymerase zeta catalytic subunit Rev3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   4.5e-109  365.2   0.1   6.5e-109  364.7   0.1    1.2  1  DNA_pol_B       DNA polymerase family B
    3.1e-28   98.9   2.1    6.3e-17   61.7   0.1    2.4  2  DNA_pol_B_exo1  DNA polymerase family B, exonuclease domain
    9.8e-10   38.8   7.7    3.5e-09   37.0   7.7    2.1  1  zf-C4pol        C4-type zinc-finger of DNA polymerase delta
  ------ inclusion threshold ------
      0.014   15.6   2.4          1    9.6   0.3    2.6  2  CEBP_ZZ         Cytoplasmic polyadenylation element-binding p
      0.023   14.6   1.0       0.16   11.9   0.0    2.7  3  DUF438          Family of unknown function (DUF438)
      0.028   14.6   0.1      0.066   13.4   0.1    1.5  1  DUF5361         Family of unknown function (DUF5361)


Domain annotation for each model (and alignments):
>> DNA_pol_B  DNA polymerase family B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  364.7   0.1  2.2e-112  6.5e-109       2     457 ..     897    1343 ..     896    1345 .. 0.92

  Alignments for each domain:
  == domain 1  score: 364.7 bits;  conditional E-value: 2.2e-112
                  -HHHHHHS-HHHHHHHHHHHHHHHTTBE-B-----.--SS.-S---..-BE----EEESS-EEEEEETTHHHHHHHHTT-STTTCE-HCCHCC.T-- CS
   DNA_pol_B    2 plsrvledgqqirveslLlrlakeegfilpdrtekkgkeeegYqGa..tVlePkkglydkpvlvlDFaSLYPsiiqahNlcyttlvaseeeak.ele 95  
                  ++ +v+++g+q++ve +++r+ak+e++ l+ ++++k+ +e++   a  +V+eP++ +y++pvlvlDF+SLYPsii+a+Nlcy+t +   ++++ + +
  EPX71413.1  897 DFMSVISRGSQFKVEAIMFRIAKSENYLLV-SPSAKQVAEQNALEAlpLVMEPRSNMYHNPVLVLDFQSLYPSIIIAYNLCYSTCLGPIRSVNgKFK 992 
                  56789*************************.777766666443344569***************************************999997666 PP

                  BTT...............TEEE-TCC-EEE-TTS---HHHHHHHHHHHHHHHHHHHHHCS--HHHHHHHHHHHHHHHHHHHHHHHHHTST.TSTT-- CS
   DNA_pol_B   96 aed............eyleveveprlvefvkksvregllpklLkdllakRkaikkelkeekdefekalldkqQlalKvtaNsvYGftGva.nsrlpc 179 
                                  + +v ++p++  +v+k+vr++l++k+L++l++ R +ikk +k++ ++   ++ld++QlalK++aN +YG+t+++ ++r+pc
  EPX71413.1  993 LGFmpysidprvmdfVKDNVYISPNGYAYVNKEVRKSLIAKMLEELIETRSMIKKGMKNCDSAYVYQILDSRQLALKLIANVTYGYTSASfSGRMPC 1089
                  6557777888888777778888888888888***********************************************************99***** PP

                  HHHHHHHHHHHHHHHHHHHHHHHHT...SSGGGT-SS......T-EEEEEBSSEEEEE-S-SSHHHHHHHHHHHHHHHHT.TSTTT--EEEEEEEEE CS
   DNA_pol_B  180 lalAasvTtiGRemLektkelvekkaellskllalpeeaeee.klkviYGDTDSvfielkvkdveellkigkelaeevseklfkkplklefekvykk 275 
                   ++A++++ +GRe L ++ ++++++               e+ +++v+YGDTDS+f+el +k+ e++++ig+ la+e+++ +f++p++l+fekvy +
  EPX71413.1 1090 SEIADTIVETGRELLGNALSYINNH---------------EKfNARVVYGDTDSLFVELPGKTKEQAFEIGHSLASEITS-MFPSPIRLKFEKVYLP 1170
                  ***********************98...............34499***********************************.**************** PP

                  EEEEETTEEEEEEEEESSTTS.EEEEESSGGGSTTS-HHHHHHHHHHHHHHSSS....S-HHHHHHHHHHHHHHHHHHHHTT-S-GGGG-EEEEESS CS
   DNA_pol_B  276 llLisKKkYaglkvektskan.klliKGvdlvRrdncklvkevikkvlelllkdeteersleeglealksilkdvleeleenkvplekfvlskelsk 371 
                    L++KK+Y+g k+ek ++   ++++KG+++vRrd ++++++v ++++e+l++     ++l+++ + +++      ++++++++p  +f+++ke++ 
  EPX71413.1 1171 CFLLAKKRYVGYKYEKVNEDVpSFDAKGIETVRRDGTPIQQKVLRSCIEKLFQS----KDLSQVKRGFQEFC----AKIMSEEIPAMDFCYNKEVRM 1259
                  ***************66665556*******************************....88887777777777....99******************* PP

                  .CCCSSGCCSHHHHHHHHHHHHC.SS---TTCEEEEEEBETSS.....SS-GGGTEEEH.HHHHHCCSEB-HHHHHH.TTHHHHHHHHT CS
   DNA_pol_B  372 epenyksknlphlevakrlkkrn.eeapevgdrisYvivekkkevkkknllaseraedp.eyvleknlpidieyYls.qllkevarlle 457 
                  ++ +  s++ p +++a+rl++++ +++p++g+r++Y++v+ +      +++ ++r ++p ey++++  ++di+yY++ +l++++ r+l+
  EPX71413.1 1260 DKYKELSTAPPGATMARRLMTKDpRSEPQYGERVPYLVVAGAP-----GTTLANRSVSPeEYLSDSFSQLDIDYYIRhNLIPPLDRFLN 1343
                  99999999***************9999**************98.....8999999999989999999*******************998 PP

>> DNA_pol_B_exo1  DNA polymerase family B, exonuclease domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.4   0.3     1e-12   3.1e-09       2     143 ..      45     206 ..      44     216 .. 0.92
   2 !   61.7   0.1   2.1e-20   6.3e-17     150     337 .]     646     831 ..     620     831 .. 0.78

  Alignments for each domain:
  == domain 1  score: 36.4 bits;  conditional E-value: 1e-12
                     ECTTSEEEEEEEE---EEEEEESSCGGHHHHHHHHHHHCCTTCCCEE................EEEEEECCCCEECCTSSCCHHCEEEEEESSTC CS
  DNA_pol_B_exo1   2 teegksvcvnvfgfkpyfYceapdgkeleevkeelkelyeelskkvt................kivkvelvlkkslygyekkpvpylkvsvsnpn 80 
                     +e+ ++vc+  +++ py+Y+e++d +++ e +e+l+ + +     ++                 + +v+lv+   +ygy+    ++lk+ + +p+
      EPX71413.1  45 NENSETVCCFLHNVFPYLYVEYSDFSNEIEKQESLSTFLNIMHLAIHhalalaartepekyrpSVQSVQLVKAIPFYGYNVGYRRFLKIALYSPR 139
                     678999*****************888887999999999999999999***********************************877********** PP

                     HHHHHHHHHHH...CCCCCCCCSSS--HHHHHHHHCTS-TTCEEEEE.TEEEEGCC--C-.SEEEEE CS
  DNA_pol_B_exo1  81 elkkirkelsp...leeivdvyeydvdylerflidnkivgfgwysvk.kylvraegkisncdveidc 143
                     +  ++ + +++   l+++++vye+  +yl +f++d ++ g++ ++++ ++l+  +++ s c+ve+ +
      EPX71413.1 140 NRDRLVDLFRQgaiLNKVIQVYESHLPYLLQFMVDYNLYGCAPIHCEnENLQASKERKSYCEVEFHM 206
                     *********99***99*******************************6666667789999***9976 PP

  == domain 2  score: 61.7 bits;  conditional E-value: 2.1e-20
                     EETTTCC..S-EEEEEEEEEETEETTSEETTTT..--EEEEEEEECCTC.SS.SEE...EEEEECCCTSS----EE--SSTCSTTEEEEEESSHH CS
  DNA_pol_B_exo1 150 akpkese..pplrvlsFDIeckskkgkfpdaensedpiiqIscvldglgekepear...klftlrecaseeeedfeltpkpeypgvkvlefdsEk 239
                     +k + ++  + +r+ls  + c sk+g +pd+++  dpi + ++++++++++ +  +   +++   +++       + +  +++p+ +vl++ sE+
      EPX71413.1 646 QKVFNKDpyASIRILSLELFCNSKNGLLPDPSK--DPI-EGCFWAYQENANIRSIEkcgFIVNSPNIE-------STAFEKSFPDATVLSVFSEI 730
                     3444555789***********************..**7.66888888884333333322333333333.......333446789*********** PP

                     HHHHHHHHHHHHH--SEEEESSTTTTHHHHHHHHHHHCCTCCHC.G.SCCS....CTCEECCCCESEEEEEECEEEETTSEEEEHHHHHHHHSSS CS
  DNA_pol_B_exo1 240 elLqaflefikqydPdvitgYNidnFDlpYilnRakelykvkls.klgrln....kggrskvseigfskqarekvkisgrihlDlyrvvkrklkl 329
                     elL++++++ +q dP+++ gY +++  + Y+ +Ra +  +++l+ +l+rl      ++ +k++  g+s  +++++ki gr +l + r+++ +++l
      EPX71413.1 731 ELLNEIISLTRQLDPTILCGYEVHSSSWGYLIERAAYKFNYDLPeQLSRLAdttkGTFSKKNDAWGYS--TTSSIKIVGRHMLNIWRIIRGEISL 823
                     ************************************77776665357777776544444555566777..************************* PP

                     SG-SHHHH CS
  DNA_pol_B_exo1 330 psYkLnav 337
                      +Y+L++v
      EPX71413.1 824 LNYSLENV 831
                     ******98 PP

>> zf-C4pol  C4-type zinc-finger of DNA polymerase delta
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.0   7.7   1.2e-12   3.5e-09       1      70 []    1389    1466 ..    1382    1466 .. 0.87

  Alignments for each domain:
  == domain 1  score: 37.0 bits;  conditional E-value: 1.2e-12
    zf-C4pol    1 ClvCk..eklk........kalCkkCrsdkqesllkllsrlkelekklneletvCqsCaqgsleeevkCdsrdCpvfYeR 70  
                  C +C               k lC++C +   + +++++++ k++  +l++le++C+ C++ s ++ v C s+ C+++Y R
  EPX71413.1 1389 CSSCLrnM--VssqnvsedKYLCDDCLKIVPTATTRVIQKSKNIAVRLARLEDICRGCSNISSSDPVLCRSKSCKIYYDR 1466
                  77777440..23445557799*****9888888*************************999999**************98 PP

>> CEBP_ZZ  Cytoplasmic polyadenylation element-binding protein ZZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.1    0.0087        26       5      44 ..    1380    1415 ..    1378    1426 .. 0.75
   2 ?    9.6   0.3   0.00035         1      11      37 ..    1438    1464 ..    1428    1476 .. 0.91

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0087
     CEBP_ZZ    5 idPyledseCeiCekakargpyfCrdlaCfkYyCetCwqr 44  
                  +d +l+++ C+ C ++  +     ++++  kY C+ C ++
  EPX71413.1 1380 LDKFLTERLCSSCLRNMVS----SQNVSEDKYLCDDCLKI 1415
                  5789*********998855....44555557888888776 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00035
     CEBP_ZZ   11 dseCeiCekakargpyfCrdlaCfkYy 37  
                  ++ C  C++ +++ p++Cr+++C  Yy
  EPX71413.1 1438 EDICRGCSNISSSDPVLCRSKSCKIYY 1464
                  779***********************9 PP

>> DUF438  Family of unknown function (DUF438)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.43   1.3e+03      13      28 ..     289     304 ..     286     312 .. 0.84
   2 ?   -2.0   0.1       1.2   3.6e+03      26      48 ..    1024    1046 ..    1022    1053 .. 0.73
   3 ?   11.9   0.0   5.5e-05      0.16       1      36 [.    1214    1249 ..    1214    1251 .. 0.96

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.43
      DUF438  13 sleevkeefkellkev 28 
                 + +++k+ef +ll++v
  EPX71413.1 289 NENQLKKEFTKLLDDV 304
                 67899*********99 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 1.2
      DUF438   26 kevsaeEIsqaEqeLieeGipve 48  
                  kev  + I+++ +eLie    ++
  EPX71413.1 1024 KEVRKSLIAKMLEELIETRSMIK 1046
                  57888999999999998655555 PP

  == domain 3  score: 11.9 bits;  conditional E-value: 5.5e-05
      DUF438    1 LkellkrLhkgesleevkeefkellkevsaeEIsqa 36  
                  L++ +++L + ++l +vk+ f+e  +++  eEI+++
  EPX71413.1 1214 LRSCIEKLFQSKDLSQVKRGFQEFCAKIMSEEIPAM 1249
                  7899*****************************998 PP

>> DUF5361  Family of unknown function (DUF5361)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   2.2e-05     0.066       3      33 ..    1052    1082 ..    1051    1111 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 2.2e-05
     DUF5361    3 CDlAEtYqiydyrqlplrkvavlalGLreds 33  
                  CD A +Yqi d rql+l+ +a +++G  + s
  EPX71413.1 1052 CDSAYVYQILDSRQLALKLIANVTYGYTSAS 1082
                  **************************98877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1489 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       616  (0.0343577); expected 358.6 (0.02)
Passed bias filter:                      474  (0.0264376); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.87u 0.30s 00:00:01.17 Elapsed: 00:00:00.46
# Mc/sec: 9695.70
//
Query:       EPX71414.1  [L=106]
Description: hypothetical protein SOCG_01632 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       829  (0.0462379); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.32s 00:00:00.72 Elapsed: 00:00:00.46
# Mc/sec: 694.64
//
Query:       EPX71415.1  [L=350]
Description: flavonol reductase/cinnamoyl-CoA reductase family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.5e-22   78.7   0.1    2.4e-21   76.3   0.1    2.1  1  Epimerase        NAD dependent epimerase/dehydratase family
    1.1e-17   64.0   0.0      2e-17   63.1   0.0    1.4  1  3Beta_HSD        3-beta hydroxysteroid dehydrogenase/isomeras
    3.2e-15   56.3   0.0      6e-15   55.5   0.0    1.5  1  GDP_Man_Dehyd    GDP-mannose 4,6 dehydratase
    4.8e-15   55.4   0.1    3.8e-14   52.5   0.1    1.9  1  NAD_binding_4    Male sterility protein
    3.1e-09   37.0   0.0    1.1e-08   35.1   0.0    2.0  1  NAD_binding_10   NAD(P)H-binding
    4.7e-08   32.7   0.0    8.9e-05   22.0   0.0    2.4  2  adh_short        short chain dehydrogenase
    2.3e-07   30.2   0.1    3.4e-07   29.7   0.1    1.2  1  Polysacc_synt_2  Polysaccharide biosynthesis protein
    5.8e-06   26.0   0.3    1.8e-05   24.5   0.2    1.8  2  NmrA             NmrA-like family
      0.003   17.5   0.0      0.014   15.3   0.0    2.0  1  KR               KR domain
  ------ inclusion threshold ------
       0.08   11.9   0.0       0.08   11.9   0.0    1.6  2  RELT             Tumour necrosis factor receptor superfamily 
      0.097   12.2   0.0       0.37   10.3   0.0    1.8  2  adh_short_C2     Enoyl-(Acyl carrier protein) reductase
       0.12   12.5   0.0       0.39   10.9   0.0    1.9  2  NAD_binding_2    NAD binding domain of 6-phosphogluconate deh


Domain annotation for each model (and alignments):
>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.3   0.1   1.6e-24   2.4e-21       1     230 [.      17     265 ..      17     273 .. 0.79

  Alignments for each domain:
  == domain 1  score: 76.3 bits;  conditional E-value: 1.6e-24
                 EEEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC.........EEEE--TT-HHHHHHHHHHHT-SEEEE--S---HHHHHHSHHHHHHH CS
   Epimerase   1 ilVtGatGfiGsalvkallekgyevigldrlssasntarledl.........elveldltdrsalerlfkeeqpdavihlAavggvaassedpadfiek 90 
                 +lVtG+tGfiG++++  ll+kgy+v g  r  ++ n+  +  l          ++  d+t++ a+++++k  ++d++ h+A    +++  ++++++++ 
  EPX71415.1  17 VLVTGVTGFIGAHVAVSLLKKGYRVRGTVRSMEKANELIR--LnpelkdkieFVIVKDITEPYAFKDVVK--DCDYICHVASPFFISNVTDNKTQLLDP 111
                 79****************************9776665443..234789999777888*************..8********9***************** PP

                 HTHHHHHHHHHHHHH.TCTEEEEEEEGGGGTSCSSSS...............BSTCSTTS--.--SSHHHHHHHHHHHHHHHHHHHHT..-EEEEEEES CS
   Epimerase  91 nlqgtlnlleaarka.gvkrllflsSsevYGkdaeqp...............keettltgpl.kpnspYaaaKlageklveayaaqyg..lnaiilrlf 170
                  +qgtl  leaa +  +vkr++  sS +  G+ ++ p                ee +   ++     +Y a+K+ +ek ++++ ++ +  +++++++++
  EPX71415.1 112 AVQGTLSALEAAITEpKVKRVVITSSFAAVGDYTKDPssgyvysekdwnpisYEEAL---KTeSGLLAYCASKVFAEKAAREWVKEKQphFDICTINPS 207
                 ***********9988799*************66665544555422222213344444...22344668***************9999555********* PP

                 EEESTT.S-TTSTTSHHH..HHHHHHHTTSSSEEEETTST-EEEEEEHHHHHHHHHHHHHHHT CS
   Epimerase 171 nlyGpr.ngegevsrvip..alirkilegkqevtllgdgtalRdflyveDvaeaillvlehvd 230
                  ++Gp  +++++++++ +  +++  i +g  ++    +g +     +v+Dva+a++l+l+h++
  EPX71415.1 208 YVFGPTiHPMNSMESLNTsnQILWTIINGS-KIQPSTQGFE----TDVRDVADAHVLALNHPK 265
                 ******855555554433003444444455.6666666666....89**************76 PP

>> 3Beta_HSD  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.1   0.0   1.4e-20     2e-17       1     231 [.      18     263 ..      18     284 .. 0.75

  Alignments for each domain:
  == domain 1  score: 63.1 bits;  conditional E-value: 1.4e-20
   3Beta_HSD   1 vvtGgaGFlGralvkeLvrlee..lkevrvlDlrespelleelskvnvkkviegDvtdkdkleealegvdvvihlaslvdvag.kltedeimkvnvkGT 96 
                 +vtG +GF+G+++  +L++ +     +vr++ ++++   l+   k +++ vi  D+t+    ++++++ d + h+as   + + ++++ ++ +  v+GT
  EPX71415.1  18 LVTGVTGFIGAHVAVSLLKKGYrvRGTVRSMEKANELIRLNPELKDKIEFVIVKDITEPYAFKDVVKDCDYICHVASPFFISNvTDNKTQLLDPAVQGT 116
                 69*****************99765669999997777666666666667767888***********************988888566778899******* PP

   3Beta_HSD  97 rnvleacv.kagvrvlvYtSsaevvgpnslgeeilng...dEeleyeslhqd.........aypesKalaEklvlkaNgrtlkngg.rlyTcaLRpagi 181
                  + lea++ +  v+++v tSs  +vg+  ++++   g    E+   + ++++         ay  sK  aEk+   a +  +k+ + ++  c + p+++
  EPX71415.1 117 LSALEAAItEPKVKRVVITSSFAAVGD-YTKDP-SSGyvySEKDWNPISYEEalktesgllAYCASKVFAEKA---ARE-WVKEKQpHFDICTINPSYV 209
                 *****9972569***************.33333.333222333322222222111122223799999999975...555.6777777************ PP

   3Beta_HSD 182 yGegdkllvpllkqlaklglalfkigdeevlsdr.....vYvgNvawahilAara 231
                 +G+  +  +++++ l  ++++l  i + + ++       + v  va+ah+lA  +
  EPX71415.1 210 FGPTIHP-MNSMESLNTSNQILWTIINGSKIQPStqgfeTDVRDVADAHVLALNH 263
                 ***9876.56788899999999999888888765122225799*********865 PP

>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.5   0.0     4e-18     6e-15       1     141 [.      18     149 ..      18     215 .. 0.78

  Alignments for each domain:
  == domain 1  score: 55.5 bits;  conditional E-value: 4e-18
                    EEETTTSHHHHHHHHHHHHCT-CCEEEEEEESS-TTHHHHHCTTT...TTGCCEEEE.E--TT-HHHHHHHHHHHT-SEEEE--S---HHHHTTSH CS
  GDP_Man_Dehyd   1 LiTGiaGfiGsylaelLlekgyevhgivrrsssfntgriehlakdpkeeleenlklh.kgDltDssslerllaevqpdevynLAAqshVdvsfekP 95 
                    L+TG++GfiG+++a  Ll+kgy+v g+vr  ++ n  ++ +l  +p+  l+++++++   D+t+  + +++++++  d + + A   ++++  ++ 
     EPX71415.1  18 LVTGVTGFIGAHVAVSLLKKGYRVRGTVRSMEKAN--ELIRL--NPE--LKDKIEFViVKDITEPYAFKDVVKDC--DYICHVASPFFISNVTDNK 105
                    9**************************99877755..55455..344..55666655156*************98..9****************** PP

                    HHHHHHHTHHHHHHHHHHHHCT..TTSEEEEEEEGGGG-S-SSSSB CS
  GDP_Man_Dehyd  96 eytaevnvlGtlrLLeairalglekkvrfyqaStsEvYGkvqevpq 141
                     + ++  v Gtl  Lea+ +    k +r++++S+    G+ ++ p 
     EPX71415.1 106 TQLLDPAVQGTLSALEAAITEP--KVKRVVITSSFAAVGDYTKDPS 149
                    ******************8864..5679999999888888876664 PP

>> NAD_binding_4  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.5   0.1   2.5e-17   3.8e-14       1     228 [.      19     233 ..      19     255 .. 0.82

  Alignments for each domain:
  == domain 1  score: 52.5 bits;  conditional E-value: 2.5e-17
                    EE-TTSHHHHHHHHHHHHHS-.TEEEEEE-SSSHHHHHHHHHHHT-SS-HHHHHHHHHTTTEE.EEE--TTSGGGG--HHHHHHHHHH--EEEE-- CS
  NAD_binding_4   1 lTGaTGFLGkvLlekLLrttpevkiyllvRaksgesaeeRleeelekkelfsallkelaerik.vveGDlseprlGLseedlqelaeevdviihsa 95 
                    +TG+TGF+G+++   LL++    ++   vR+ ++++ + Rl+ e     l        +++i+ v++ D++ep+      +++++++ +d i+h+a
     EPX71415.1  19 VTGVTGFIGAHVAVSLLKKGY--RVRGTVRSMEKANELIRLNPE-----L--------KDKIEfVIVKDITEPY------AFKDVVKDCDYICHVA 93 
                    7******************98..9********999999999443.....3........3444316788****99......9*************** PP

                    SS-...S.STTSSEEHHHHHHHHHHHHHHHTSSS--.-EEEEEE.GGGTTS-TTT--SSS-H......HHH--EEEETTTCCCHHHHHHHHHHHHH CS
  NAD_binding_4  96 Atv...nfdepykellrvNveGtrevlelakklkklkvllhvST.ayvngeregeveekvyeegekeekldederaklkglpntYeqsKalaEklv 187
                          n++++  +ll++ v+Gt   le a +  k k ++  S+ a+v ++ ++  +  vy+e++ + + +e++++++ gl  +Y  sK+ aEk  
     EPX71415.1  94 SPFfisNVTDNKTQLLDPAVQGTLSALEAAITEPKVKRVVITSSfAAVGDYTKDPSSGYVYSEKDWNPISYEEALKTESGLL-AYCASKVFAEKAA 188
                    *7622266667778******************99999********99999999999999**999999999999999988875.8************ PP

                    HHHHHHH---...EEEEEE-EEE-...-SSST---TTSHHHHHHHHH CS
  NAD_binding_4 188 rearrrsglp...vvivRpsiitg...esktGwingsdlgirgllgl 228
                    re+ ++ + p   ++ + ps++ g   ++++ ++++ ++  + l  +
     EPX71415.1 189 REWVKE-KQPhfdICTINPSYVFGptiHPMN-SMESLNTSNQILWTI 233
                    ***987.4443449**********9997776.566665444444443 PP

>> NAD_binding_10  NAD(P)H-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.1   0.0   7.6e-12   1.1e-08       1     108 [.      21     148 ..      21     264 .. 0.73

  Alignments for each domain:
  == domain 1  score: 35.1 bits;  conditional E-value: 7.6e-12
                     TTTSHHHHHHHHHHHHC-T-EEEEEETTHHHCHHHH.....CTTTCE.EEE--TT-CCHHHHHHTT-SEEEES-........--TCCHHHH.... CS
  NAD_binding_10   1 GAtGkvGrllvkellargghevtalvRnpeklaele.....aeegle.vvegdvtdvedlaealkgadaVvsal........ggggkdeeg.... 77 
                     G tG +G +++  ll++ g++v+  vR+ ek++el       ++++e v++ d+t++ + ++++k++d ++  +             d+++    
      EPX71415.1  21 GVTGFIGAHVAVSLLKK-GYRVRGTVRSMEKANELIrlnpeLKDKIEfVIVKDITEPYAFKDVVKDCDYICHVAspffisnvT----DNKTqlld 110
                     78***************.5*************98764333222455546778****************998888677765321....22223466 PP

                     ......HHHHHHHHHHCT--EEEEEEETTT.TSGCGCH CS
  NAD_binding_10  78 ......aknivdaakeagvkRfvlvsaigv.gdevpge 108
                             ++ +a  e +vkR+v+ s++ + gd ++++
      EPX71415.1 111 pavqgtLSALEAAITEPKVKRVVITSSFAAvGDYTKDP 148
                     666664444445567789********976524433333 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0     6e-08   8.9e-05       2      71 ..      16      86 ..      15      91 .. 0.90
   2 !    8.3   0.0   0.00095       1.4     140     184 ..     168     211 ..     162     222 .. 0.82

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 6e-08
                EEEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHTTSEEEE.EE-TTTSHHHHHHHHHHH CS
   adh_short  2 vvlvtGassGIGraiakelakeGakvvvvdrseekleevakelkeegakala.iqvDvtdreevealveka 71
                 vlvtG ++ IG  +a  l+k+G++v  + rs ek++e++    e+++k+ + i  D+t+  + +++v+++
  EPX71415.1 16 LVLVTGVTGFIGAHVAVSLLKKGYRVRGTVRSMEKANELIRLNPELKDKIEFvIVKDITEPYAFKDVVKDC 86
                69**************************************9999998887651678****99999999876 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00095
                 TSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSS CS
   adh_short 140 kvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdT 184
                 ++   g+ aY+AsK + ++ +r++ ke +p+   + +++P +v  
  EPX71415.1 168 LKTESGLLAYCASKVFAEKAAREWVKEKQPH-FDICTINPSYVFG 211
                 56677889**********************9.9999999998865 PP

>> Polysacc_synt_2  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   0.1   2.3e-10   3.4e-07       1     132 [.      17     141 ..      17     145 .. 0.88

  Alignments for each domain:
  == domain 1  score: 29.7 bits;  conditional E-value: 2.3e-10
                      EEEETTTSHHHHHHHHHHHHHB-SEEEEEES-HHHHHHHHHH......-TTEEEE....E--TT-HHHHHHHTT..T-SEEEE------HHHHH CS
  Polysacc_synt_2   1 vlvtGagGsiGselvrqilkkkpkkiillerdElklyeiekeleeelkkkklkveivpvigdvrdkerlekaleelkvdvvfhaAAlKhVPlve 94 
                      vlvtG +G iG ++   +lkk  +    + + E++   i+ +   elk+ k+++    ++ d+++    +++++  ++d++ h+A    +  v 
       EPX71415.1  17 VLVTGVTGFIGAHVAVSLLKKGYRVRGTVRSMEKANELIRLNP--ELKD-KIEFV---IVKDITEPYAFKDVVK--DCDYICHVASPFFISNVT 102
                      89*******************8888778888888877777654..4444.77666...99**************..****************** PP

                      HSHHHHHHHHHHHHHHHHHHHHHT.T-SEEEEEEEGGGS CS
  Polysacc_synt_2  95 enpleaiktNvlgtenvieaaiea.gvkkvvliStDKAv 132
                       n ++ ++  v gt + +eaai+  +vk+vv+ S+  Av
       EPX71415.1 103 DNKTQLLDPAVQGTLSALEAAITEpKVKRVVITSSFAAV 141
                      *********************86439******9987666 PP

>> NmrA  NmrA-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   0.2   1.2e-08   1.8e-05       1     154 [.      17     193 ..      17     208 .. 0.73
   2 ?   -1.8   0.0       1.2   1.8e+03     176     202 ..     242     269 ..     178     290 .. 0.61

  Alignments for each domain:
  == domain 1  score: 24.5 bits;  conditional E-value: 1.2e-08
                 EEESSTTSHHHHHHHHHHHHHT-EEEEEES-S.....-SHHHHHHHHSTTEEEES-TT-HHHHHHHHTT-SEEEE---GG.............S-HHHH CS
        NmrA   1 IlviGaTGrqGksvvrallkaghkvralvRdt.....kselakslkeaGvelvkgdlddkeslvealkgvdvvfsvtgfy.............skeied 81 
                 +lv+G TG +G++v+  llk+g++vr  vR          l  +lk++   ++  d+ +    + ++k+ d +  v + +             +  + +
  EPX71415.1  17 VLVTGVTGFIGAHVAVSLLKKGYRVRGTVRSMekaneLIRLNPELKDKIEFVIVKDITEPYAFKDVVKDCDYICHVASPFfisnvtdnktqllDPAV-Q 114
                 79*****************************9653332334569999988889****************9988666554456667767555433333.3 PP

                 HH..HHHHHHHHHS-SEEEEEE---GG.GT.SSS---TTTHHH....HHHHHHHHHCTS-EEEEEE-EEGGG-BSSS-S CS
        NmrA  82 gk..klvdAakeaGvkhfiySslgddndrsnaeepavphfdsK....aeieeyvralgipytfvyagffmenflsllaq 154
                 g+  +l +A+ e +vk+++  s ++++  + ++  + +++++K    ++ ee+++ ++    + ++++f+e  ++ +++
  EPX71415.1 115 GTlsALEAAITEPKVKRVVITSSFAAVGDYTKDPSSGYVYSEKdwnpISYEEALKTESGLLAYCASKVFAEKAAREWVK 193
                 33225667788888**998766666666665666688999999555556677777777777777777777777776665 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 1.2
                 TS-EE.-HHHHHHHHHHHHHHHHHHHTT CS
        NmrA 176 kavll.daeeDiGafvikilkdprklkg 202
                 +   + ++++D++ + + +l++p+   g
  EPX71415.1 242 STQGFeTDVRDVADAHVLALNHPKLSGG 269
                 2222256888888888888888865444 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   9.5e-06     0.014       3     140 ..      17     141 ..      16     147 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 9.5e-06
                 EEEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHTT-EEEE.----TT-HHHHHHHHHHHHHHSS---EEEE---------TTT- CS
          KR   3 ylitGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaelealgaevev.vaaDvsdkdavealleeikaeeppikGvihaAgvlrdklleem 100
                 +l+tG +G +G ++a  l++kg r +  + Rs +   ++++li+   +l  ++e+ +  D++++ a + ++++++        + h A  +    ++++
  EPX71415.1  17 VLVTGVTGFIGAHVAVSLLKKGYR-VRGTVRSME---KANELIRLNPELKDKIEFvIVKDITEPYAFKDVVKDCD-------YICHVASPF---FISNV 101
                 69********************76.556667744...4444555555555566641345***************8.......578877644...55555 PP

                 -HHHHHHHHTTTTHHHH.HHHHHTTTS--SEEEEEEEHHHH CS
          KR 101 taedleqvlapKvkGaw.nLhelledesldffvlfSSiagl 140
                 t+ + +q+l p v+G+   L+ ++++ +++ +v++SS a++
  EPX71415.1 102 TD-NKTQLLDPAVQGTLsALEAAITEPKVKRVVITSSFAAV 141
                 54.557899******96379999999***********9986 PP

>> RELT  Tumour necrosis factor receptor superfamily member 19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   5.4e-05      0.08       6      36 ..      16      46 ..      15      52 .. 0.77
   2 ?   -4.7   0.9       8.6   1.3e+04      20      23 ..      89      92 ..      89      92 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 5.4e-05
        RELT  6 LVpvFflmGLlGvLiChvLkkKGYrCtteke 36
                LV+v  ++G +G  +   L kKGYr++    
  EPX71415.1 16 LVLVTGVTGFIGAHVAVSLLKKGYRVRGTVR 46
                677777888888888888********97655 PP

  == domain 2  score: -4.7 bits;  conditional E-value: 8.6
        RELT 20 iChv 23
                iChv
  EPX71415.1 89 ICHV 92
                9**8 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00025      0.37       5      62 ..      25      85 ..      21      91 .. 0.89
   2 ?   -1.3   0.0       0.9   1.3e+03     126     158 ..     162     194 ..     161     219 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00025
                  SHHHHHHHHHHHTT-EEEEEESSGGHHHHHHHHHHHTTSEE...EE--TTSHHHHHHHHHH CS
  adh_short_C2  5 gIGraiAkalaeeGaevvltdlneeakkrveelaeelgaev...lecDVtdeeqvealvee 62
                   IG+++A +l ++G++v  t ++ e+++++ +l  el+ ++   +  D+t++ + +++v++
    EPX71415.1 25 FIGAHVAVSLLKKGYRVRGTVRSMEKANELIRLNPELKDKIefvIVKDITEPYAFKDVVKD 85
                  59************************************994446*********99999986 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.9
                   EEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHH CS
  adh_short_C2 126 lssvgaervvpnynaygaaKaalealtrylAve 158
                   +s+  a ++ ++  ay+a+K   e+ +r + +e
    EPX71415.1 162 ISYEEALKTESGLLAYCASKVFAEKAAREWVKE 194
                   678888888999999999999999888877665 PP

>> NAD_binding_2  NAD binding domain of 6-phosphogluconate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00026      0.39       8      58 ..      24      88 ..      19     125 .. 0.81
   2 ?   -2.6   0.0       3.8   5.6e+03      78     102 ..     324     348 ..     318     349 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00026
                   SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT..............EEE-SSHHHHHHHCSE CS
  NAD_binding_2  8 GvMGsnmalnllkagykvavynrtkekveelvaeg..............akaaesieelvasldv 58
                   G +G++ a  llk+gy+v +  r+ ek++el+  +              ++  +  +++v+++d 
     EPX71415.1 24 GFIGAHVAVSLLKKGYRVRGTVRSMEKANELIRLNpelkdkiefvivkdITEPYAFKDVVKDCDY 88
                   889****************************9988666666666555554455555556665555 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 3.8
                    CC--TT-EEEE-S---HHHHHHHHH CS
  NAD_binding_2  78 ealkkgdilidgstsspedtrelak 102
                    +++++++++id++t   e ++++++
     EPX71415.1 324 KYYSEEQTYIDTATNLWERAKQFQE 348
                    6778999999999999998888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (350 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       420  (0.0234257); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 2383.82
//
Query:       EPX71416.1  [L=346]
Description: pyrimidine nucleotide transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.4e-70  231.0   0.9    9.3e-24   83.2   0.2    3.1  3  Mito_carr  Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.2   0.0   1.9e-26   3.4e-22       5      95 ..      34     138 ..      31     140 .. 0.81
   2 !   83.2   0.2   5.2e-28   9.3e-24       4      93 ..     146     234 ..     143     238 .. 0.95
   3 !   66.8   0.0   6.5e-23   1.2e-18       8      93 ..     260     345 ..     255     346 .] 0.95

  Alignments for each domain:
  == domain 1  score: 78.2 bits;  conditional E-value: 1.9e-26
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS..............HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   5 vlkellaGglagavatlvttPldvvKtrlqtqkksskksksaa..............ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetl 89 
                 + ++++aGg+ag++++++t+PldvvKtrlq++  + +  k+++              +  +l ++  +eG r+l+rGl+pnl++++pa++++f++y   
  EPX71416.1  34 PSSHFIAGGVAGMLGAIATAPLDVVKTRLQSDFYKDRVLKQSGpkhgvraiyrqfvdTCLILNNVRLQEGARALFRGLGPNLVGTIPARSINFFSYGNG 132
                 6789***************************555554444444344555566666666666777779******************************** PP

                 HHHHCT CS
   Mito_carr  90 krlllk 95 
                 kr++ +
  EPX71416.1 133 KRIIAD 138
                 *99876 PP

  == domain 2  score: 83.2 bits;  conditional E-value: 5.2e-28
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                 s + +l+++++ag++++ +t+P+++vKtrlq++k+s++++++++ +d++ k++k eG++gly+Gl+++ll+v  +s l++v+ye++k+++
  EPX71416.1 146 SSQVHLVSAAIAGVITSAATNPIWLVKTRLQLDKRSGQTARYKSSVDCIIKTMKVEGISGLYKGLSASLLGVG-ESTLQWVVYEKFKHTV 234
                 56789*******************************************************************9.*************976 PP

  == domain 3  score: 66.8 bits;  conditional E-value: 6.5e-23
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   8 ellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                 +l  +gla+ +a+ +++P +vv+trl  +++++   k++++l++++ ++ke+G++gly Gl++ llrv+p++ + f++ye++ +++
  EPX71416.1 260 KLGGAGLAKFIAAAIAYPHEVVRTRLRQSPSTNGIPKYNGLLQCFYLVWKEQGVAGLYGGLTAHLLRVVPNACILFGSYEVIMHFI 345
                 566789****************************************************************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (346 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       326  (0.0181828); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2451.60
//
Query:       EPX71417.1  [L=1140]
Description: mediator complex subunit Srb8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.5e-22   78.4   0.7    1.3e-21   76.7   0.7    2.1  1  Med12     Transcription mediator complex subunit Med12


Domain annotation for each model (and alignments):
>> Med12  Transcription mediator complex subunit Med12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.7   0.7     7e-26   1.3e-21       1      63 []     120     182 ..     120     182 .. 0.98

  Alignments for each domain:
  == domain 1  score: 76.7 bits;  conditional E-value: 7e-26
       Med12   1 fkpPsrvtlndakrenwlkdLadpsvpLtrLsrsvPhgfrgekLlemllrksVpisRAvWfir 63 
                 + pP+rv l+++++ +wl+dLa+++v+L++Ls+++Phg++g+++++ +++ +Vp++RA+Wfir
  EPX71417.1 120 WDPPPRVRLSETRKLSWLQDLANDTVSLSELSKKIPHGVWGKEIIQLVHDFRVPLPRAIWFIR 182
                 579***********************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1140 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       574  (0.0320152); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.74u 0.28s 00:00:01.02 Elapsed: 00:00:00.46
# Mc/sec: 7455.11
//
Query:       EPX71418.1  [L=922]
Description: hypothetical protein SOCG_01636 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (922 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1144  (0.0638072); expected 358.6 (0.02)
Passed bias filter:                      284  (0.0158403); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.67u 0.32s 00:00:00.99 Elapsed: 00:00:00.47
# Mc/sec: 5912.04
//
Query:       EPX71419.1  [L=390]
Description: structure-specific endonuclease subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.2e-12   45.5   0.1      1e-11   44.6   0.1    1.5  1  Slx4      Slx4 endonuclease
  ------ inclusion threshold ------
      0.097   13.2   0.2       0.24   11.9   0.2    1.6  1  DUF3614   Protein of unknown function (DUF3614)


Domain annotation for each model (and alignments):
>> Slx4  Slx4 endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.6   0.1   1.1e-15     1e-11       2      58 ..     322     377 ..     321     379 .. 0.94

  Alignments for each domain:
  == domain 1  score: 44.6 bits;  conditional E-value: 1.1e-15
                 HHHHHHHHT..-HHHHHHHHTT--EEHHHHHHHHHHH-GGGGGS-HHHHHHHHHHHT-- CS
        Slx4   2 eaiteaiks..dpslhekILlYePIvLedltawLnteglglkevdpaelrewcdskgIc 58 
                 + i+ea++   d++++ kIL YeP++Le++t wL+++gl    ++ a +  wcd+ g+ 
  EPX71419.1 322 RSISEAVRGsrDKTIWLKILYYEPLDLEEFTLWLRNSGL---VLSSAIILSWCDTYGVL 377
                 67999999889**************************99...*************9996 PP

>> DUF3614  Protein of unknown function (DUF3614)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.2   2.7e-05      0.24      73     124 ..     284     332 ..     266     340 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 2.7e-05
     DUF3614  73 srvvvkkvpvssekssssrgassPrvdsvrssgaivvggvvhevlkkiregr 124
                  r  +kk  +s+++ss++++as P+v  +   ++i v+ +++ +++++r++r
  EPX71419.1 284 AREKMKKQELSKDESSKKENASIPSV--ATTFDDI-VAESHRSISEAVRGSR 332
                 466799***********999999***..8888887.78999********998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (390 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       837  (0.0466841); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 3001.62
//
Query:       EPX71420.1  [L=242]
Description: glutathione S-transferase Gst3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-12   47.6   0.0      4e-12   46.3   0.0    1.7  1  GST_N     Glutathione S-transferase, N-terminal domain
    4.5e-12   46.2   0.0    8.3e-12   45.3   0.0    1.4  1  GST_N_3   Glutathione S-transferase, N-terminal domain
    4.8e-09   36.3   0.0    2.4e-08   34.1   0.0    2.0  2  GST_C     Glutathione S-transferase, C-terminal domain
    4.7e-07   30.0   0.0    1.4e-06   28.5   0.0    1.8  2  GST_N_2   Glutathione S-transferase, N-terminal domain
    1.8e-05   24.7   0.8    0.00013   21.9   0.7    2.2  1  GST_C_2   Glutathione S-transferase, C-terminal domain
    0.00022   21.3   0.0    0.00045   20.4   0.0    1.5  1  GST_C_3   Glutathione S-transferase, C-terminal domain


Domain annotation for each model (and alignments):
>> GST_N  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.3   0.0   1.3e-15     4e-12       3      76 .]       2      73 ..       1      73 [. 0.93

  Alignments for each domain:
  == domain 1  score: 46.3 bits;  conditional E-value: 1.3e-15
                EEEESSSTSHTHHHHHHHHHHTT-EEEEEEECSTTTCGGCHHHHHHCTTS-SSEEEETTEEEESHHHHHHHHHH CS
       GST_N  3 ltlysirgsprahrirlllaakgveyevvpldfeageekspellklnplgkvPaLedngkkltESraIleYiar 76
                +tly+  + +r+ ri +ll++++v+y  +++++  g + ++e+++l plgk+P+L+d+g   +ES+a  e+++r
  EPX71420.1  2 ITLYHLSD-SRSSRIIWLLEELKVPYDLKQYNR-VGGRSPAEFYNLSPLGKSPVLVDDGRSYIESGAVIEHLVR 73
                68999999.9**********************8.555678*******************************975 PP

>> GST_N_3  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.3   0.0   2.8e-15   8.3e-12       1      72 [.       4      76 ..       4      82 .. 0.92

  Alignments for each domain:
  == domain 1  score: 45.3 bits;  conditional E-value: 2.8e-15
                EES-TTSHHHHHHHHHHHHHT--EEEE---..TTTTHHHHHHH-TT--SSEEETTS-EEESHHHHHHHHHHHH- CS
     GST_N_3  1 LygfpaSpyarrvrlaLnekglpvevvevt..pgehdeellaknplgkvPvLeddgealtdSlaIidyLeelyp 72
                Ly+  +S+ + r+ ++L+e+++p+ +   +  +g++++e+ + +plgk PvL+ddg+++ +S a+i++L ++y+
  EPX71420.1  4 LYHLSDSR-SSRIIWLLEELKVPYDLKQYNrvGGRSPAEFYNLSPLGKSPVLVDDGRSYIESGAVIEHLVRKYG 76
                89999999.99************9997776548888***********************************998 PP

>> GST_C  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.57   1.7e+03      67      85 ..      72      92 ..      66      94 .. 0.83
   2 !   34.1   0.0   7.9e-12   2.4e-08      28      93 .]     141     204 ..     116     204 .. 0.89

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.57
                HHHHTTTTT..TTTSHHHHHH CS
       GST_C 67 lqrlglafg..qekfpnlkaw 85
                ++++g +f+  +++ p+l ++
  EPX71420.1 72 VRKYGRNFKpsEQDIPHLEKY 92
                6777888888899*****997 PP

  == domain 2  score: 34.1 bits;  conditional E-value: 7.9e-12
                 HHHHHHHHHHHHHHHHTSSSSSTTSSCHHHHHHHHHHHHHHHHTTTTTTTTSHHHHHHHHHHHTSH CS
       GST_C  28 lekvaevlsaleeelkkqdylvGdkltlADialvpilnwlqrlglafgqekfpnlkawlerimarp 93 
                 +++++  l+ ++ +l+++ y++Gd++t AD+ +   l++lq+ +l+     +pn+ +wl+ i +rp
  EPX71420.1 141 MKEIFLNLDHVDDYLATSRYFAGDRFTAADVQMSYPLLCLQSSVLNTR--PYPNIRRWLKDIGSRP 204
                 567778899999***********************************5..************9998 PP

>> GST_N_2  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.5   0.0   4.7e-10   1.4e-06       5      67 ..      12      71 ..      10      74 .. 0.91
   2 ?   -1.9   0.0       1.5   4.4e+03      35      58 ..     164     186 ..     132     199 .. 0.62

  Alignments for each domain:
  == domain 1  score: 28.5 bits;  conditional E-value: 4.7e-10
                HHHHHHHHHHCT--EEEEEEH...-TTSHHHHHHHHCTTTSSSEEE-CTTEEEESHHHHHHHH CS
     GST_N_2  5 ahRvlialalkglediisvvvlepkgfekseefprlnprgtVPvLwdkdgqvineSseIlryl 67
                ++R+ ++l+++++++ ++ +  ++ g + ++ef +l+p+g+ PvL+d dg+ + eS + ++ l
  EPX71420.1 12 SSRIIWLLEELKVPYDLKQY--NRVGGRSPAEFYNLSPLGKSPVLVD-DGRSYIESGAVIEHL 71
                68*****************9..567778889***************9.99********99987 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.5
                 HHHHHHCTTTSSSEEE-CTTEEEE CS
     GST_N_2  35 eefprlnprgtVPvLwdkdgqvin 58 
                 + f +++ + + P+L + +++v+n
  EPX71420.1 164 DRFTAADVQMSYPLLCL-QSSVLN 186
                 44555555557777776.556666 PP

>> GST_C_2  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.7   4.4e-08   0.00013      14      68 ..     147     198 ..     137     199 .. 0.75

  Alignments for each domain:
  == domain 1  score: 21.9 bits;  conditional E-value: 4.4e-08
                 CHHHCTTT---SS.CTTCS--HHHHHHH.H..HHHHHHHHHHS----TT-HHHHHHHH CS
     GST_C_2  14 aldaleahLadspflfGdqptlaDiala.p..flvrlraagpgfdireaypnlraWle 68 
                  ld ++++La s++++Gd++t+aD+    p  +l+    +++       ypn+r+Wl+
  EPX71420.1 147 NLDHVDDYLATSRYFAGDRFTAADVQMSyPllCLQSSVLNTR------PYPNIRRWLK 198
                 6999********************866525333334444443......7899999986 PP

>> GST_C_3  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0   1.5e-07   0.00045      23      91 ..     138     205 ..     118     208 .. 0.84

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 1.5e-07
                 HHHHHHHHCHHHHHHHHHHCHGTSSSSTTS--HHHHHHHHHHHHHHHH.TCCCC-HHHHHHHHHHHTSHH CS
     GST_C_3  23 efleerlpkflkyfekvlkkkgggylvgdklTyADlalfqvldgleea.ealkkfpklkalyervearpk 91 
                  ++ +++   l++++ +l+  ++ y++gd++T AD+ +   l  l++   +++++p++ ++ + + +rp+
  EPX71420.1 138 HYYMKEIFLNLDHVDDYLA--TSRYFAGDRFTAADVQMSYPLLCLQSSvLNTRPYPNIRRWLKDIGSRPA 205
                 5666666667899999999..999************99999999999855559**************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       406  (0.0226449); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 1647.28
//
Query:       EPX71421.1  [L=192]
Description: hypothetical protein SOCG_01639 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.1e-42  143.6   0.0    4.7e-42  143.4   0.0    1.0  1  AMMECR1   AMMECR1


Domain annotation for each model (and alignments):
>> AMMECR1  AMMECR1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.4   0.0   2.6e-46   4.7e-42       1     165 [.       7     177 ..       7     178 .. 0.92

  Alignments for each domain:
  == domain 1  score: 143.4 bits;  conditional E-value: 2.6e-46
                 HHHHHHHHHHHTTSS-S-HH---HHHHSEEEEEEEEE...EE..CCECCCECEEEEEEHHHHHHHHHHHHHHT-TTS----HHHHTTEEEEEEEE---E CS
     AMMECR1   1 lklareaieealkeekkleeeakeelkekaglFVtlk...ekkgeLRGCiGtleperpLaeevaenAlaaAfeDpRFspvtaeElpeleveVsvLtepe 96 
                 + +++e+++++l+++k+ +  + ++++++ +lFV++    + +++LRGCiGt++ +rpL+ +++  + +aAf+D RF+pvt +Elp le+ +++L+++e
  EPX71421.1   7 CYFCFEVVAATLEHRKPRNYWNWKSWTDEVPLFVKFIfkeRLQKKLRGCIGTFQ-PRPLNINLRYLSQQAAFSDDRFHPVTLAELPFLECGIDLLVNFE 104
                 568*****99******99988888999********986555556**********.9******************************************* PP

                 E--.GGG--TTT-EEEEE.E.T..TEEEEE-THHHHHTT--HHHHHHHHHHHHTS-TTCCCSTTSEEEEE-EEE CS
     AMMECR1  97 piv.ledlevgkhGliie.k.g..srsatlLPqvaveqgwdkeeflasllrKaglrpdewkdseikltryevek 165
                 pi+ + ++ vg+hGl ie + +  ++sat+LP+va+eqgw+++e+l sl+rK+g+++ ++++ +i++try++++
  EPX71421.1 105 PIDdPLNWIVGVHGLSIEfYvDkiRYSATYLPSVAAEQGWTQKETLLSLIRKSGFYG-NLRNISIQATRYQSTQ 177
                 **44566***********765268********************************9.67788********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       412  (0.0229795); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1389.76
//
Query:       EPX71422.1  [L=206]
Description: kinetochore protein Mis14 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.7e-18   66.1   2.7    4.1e-17   62.7   2.7    2.3  1  Mis14     Kinetochore protein Mis14 like
  ------ inclusion threshold ------
       0.12   12.1   0.8       0.66    9.7   0.1    2.1  2  FTO_CTD   FTO C-terminal domain


Domain annotation for each model (and alignments):
>> Mis14  Kinetochore protein Mis14 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.7   2.7   4.6e-21   4.1e-17       1     129 [.      73     197 ..      73     201 .. 0.83

  Alignments for each domain:
  == domain 1  score: 62.7 bits;  conditional E-value: 4.6e-21
                 HHHHCTEECTTBXSTT.SHHHHHHHHHHTT.XXXXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCT--HHHHH--....- CS
       Mis14   1 emasesvvinGldsssksikdllsesqkeevEpfdlelnekvrslyqelEdltvevAqlRreaPrkiaeayakelkaeleeldeyleainelek..qek 97 
                 ++++++++inG d+ +++  d+   +++ ++E fdl l+++v++l++++Ed+ v vA++R+ +P ++++a+ ++l+++l+ l++   ++n+  +  + +
  EPX71422.1  73 TTVQDNITINGFDA-KSALEDP---QNSDQIESFDLGLRSRVQQLFNDVEDAQVRVAKYRKYVPLQYESAFSNSLNEQLATLQN--LRVNPTNEdvHPV 165
                 589**********5.2222222...234456*****************************************************..5555555555889 PP

                 -----SSSHHHHHHHHHHHHHHHHHHHHHHHH CS
       Mis14  98 kdpeeddededekerleelvkqyeeslkslke 129
                 +d+ e+de+  +  r e+ ++++   +ks+++
  EPX71422.1 166 NDEVEKDEPPIDLDRYEQTIAKIAFLKKSIPK 197
                 99999999999999999998888777777766 PP

>> FTO_CTD  FTO C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.1     0.035   3.2e+02       3      51 ..      21      70 ..      19      74 .. 0.75
   2 ?    9.7   0.1   7.4e-05      0.66     106     162 ..     136     196 ..      94     204 .. 0.76

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.035
     FTO_CTD  3 fdyikkrcesalaalpklksdedtlaaskksleksv.vrlleeihnE.vEf 51
                ++y+k   ++a+++  +++ +e+  +++ k  e +  vr ++e++nE +Ef
  EPX71422.1 21 YNYVKAVFRNAIQKTLEIHLPEQASRETGKGKEDHLrVR-VKEMLNElIEF 70
                689999999999999999999999999988877776354.55555553677 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 7.4e-05
     FTO_CTD 106 eeeildvllelLeerqelReewaartrskafeelpaderPvdlPkfdd....sspLpedLe 162
                 e+   + l e L + q+lR + ++    ++ +e+++de P+dl  +++     + L + + 
  EPX71422.1 136 ESAFSNSLNEQLATLQNLRVNPTNEDVHPVNDEVEKDEPPIDLDRYEQtiakIAFLKKSIP 196
                 3556678999************************************996554333444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (206 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       847  (0.0472419); expected 358.6 (0.02)
Passed bias filter:                      501  (0.0279436); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.39s 00:00:00.99 Elapsed: 00:00:00.58
# Mc/sec: 1072.14
//
Query:       EPX71423.1  [L=967]
Description: glycosylceramide biosynthesis protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-31  109.9  10.5    1.2e-31  109.9  10.5    2.8  3  Frag1         Frag1/DRAM/Sfk1 family
  ------ inclusion threshold ------
      0.093   12.6   0.0       0.18   11.6   0.0    1.4  1  POTRA_2       POTRA domain, ShlB-type


Domain annotation for each model (and alignments):
>> Frag1  Frag1/DRAM/Sfk1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.9  10.5   1.4e-35   1.2e-31       3     218 ..      13     219 ..      11     220 .. 0.95
   2 ?    1.4   0.1     0.022   1.9e+02      78     109 ..     411     449 ..     361     454 .. 0.77
   3 ?   -4.1   1.0         1   9.3e+03     134     154 ..     538     558 ..     530     612 .. 0.43

  Alignments for each domain:
  == domain 1  score: 109.9 bits;  conditional E-value: 1.4e-35
       Frag1   3 fllpliafilwlgmliamlvcavvqgpvdyvfmh.keqf...lPyISd.igatnpeslffslalnlglflvilvallrfqrlpplatksernlnfaalv 96 
                  +++ i+ +++l+++++ l + ++ +++++v+++   ++   +P++S+ ig+++pe+  f+++++l++ +++lv+ll+ +             + + ++
  EPX71423.1  13 QYVAAIHSVCSLAAFVIPLGLTLYYHYHEVVKNEfFSYPdewFPSVSAtIGDWYPERAAFQYLIALTATPRLLVLLLWLSLTGSKKP-----SALITTF 106
                 5899**********************999***9999999*************************************99988755555.....488999* PP

       Frag1  97 lgligalglllvsifstaeyhsvHlvgavvffvfgflyvllqtalyykmgrhyvwnkstisfrlkvvllilavvlailfgvffvrhkkkcgygayslsA 195
                 +g++++  ++++ +++++++h++H+v++++++ + +++++l++  +         + +   +r++   ++l+v +++++++++++hk+k  +gay+++A
  EPX71423.1 107 IGVLRTALCGGWVYVTSTDDHNMHDVFMISYLLMNAPWFILTSKYS---------PPNASAYRVRKYGSFLFVGTVFPLIYWYIQHKFKRIPGAYTIYA 196
                 ****************************************999977.........788999************************************** PP

       Frag1 196 ifEWllafwfiiffltfsvDFyt 218
                 +fEW+l+fw ++f+  +++DF++
  EPX71423.1 197 FFEWSLIFWDVLFDSALYFDFQP 219
                 *********************97 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.022
       Frag1  78 r.......lpplatksernlnfaalvlgligalglllvs 109
                 +       ++p  ++++     +alv+g++++lg +l+s
  EPX71423.1 411 YsffsnnpIWPILNETNGGRQPVALVFGVLATLGFSLCS 449
                 24455555788888888889999************9998 PP

  == domain 3  score: -4.1 bits;  conditional E-value: 1
       Frag1 134 yvllqtalyykmgrhyvwnks 154
                  ++ ++a +y +  ++ w+ +
  EPX71423.1 538 GFVASCAGSYVFYLKHGWQSY 558
                 233333322222222223333 PP

>> POTRA_2  POTRA domain, ShlB-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0     2e-05      0.18      24      70 ..     827     876 ..     823     878 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2e-05
                 CCCSSSEEEHHHHHHHHHHHHHHHHHTT-TT-EEEEEECCE...ETTEEE CS
     POTRA_2  24 qpylgkclgladlnqlakeltnayiekGYvtsrvllppqdl...esGtlk 70 
                 +++l+++l++++l+++++e t  ++  GYv+s ++ +pq++   ++G+l+
  EPX71423.1 827 ENALDRQLQSTELSRIMRESTRPLVFLGYVVSNAGEEPQTIltrNNGMLD 876
                 68899**********************************66222566665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (967 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       498  (0.0277762); expected 358.6 (0.02)
Passed bias filter:                      271  (0.0151152); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.75u 0.27s 00:00:01.02 Elapsed: 00:00:00.49
# Mc/sec: 5945.00
//
Query:       EPX71424.1  [L=207]
Description: translation release factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.5e-20   71.4   1.2    8.3e-20   70.9   1.2    1.2  1  RF-1      RF-1 domain


Domain annotation for each model (and alignments):
>> RF-1  RF-1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.9   1.2   4.6e-24   8.3e-20       9     116 .]      71     202 ..      64     204 .. 0.78

  Alignments for each domain:
  == domain 1  score: 70.9 bits;  conditional E-value: 4.6e-24
                 GGGEEEEEE---SSSSSSGCSSSCEEEE.EETTT.........................TEEEEEEECSSSHHHHHHHHHHHHHHHHHH..HHHHH.CC CS
        RF-1   9 ekdleidtfrssGaGGQnVNktesaVrl.thlpt.........................gvivvecqeeRsqekNrekAlerLkaklke..kelee.ek 78 
                 ++++ei+++rssG+GGQnVNk +++V++ + l++                         + + +++q +R+q kN e+Al rL++ l++  k+l    +
  EPX71424.1  71 KDQVEIKFARSSGPGGQNVNKINTKVTVsLPLENlrpifpsfllrhictcqelrrfrvnDQLQIQSQATRTQSKNIEDALTRLANLLQDvaKSLYIaPT 169
                 6899************************6333336778999*****************9559*************************886522222134 PP

                 CCCHTTTTT-.S.-S---S.--ECEEEECGCTTEEEETT CS
        RF-1  79 eeekkrrvkkekkkigtgs.sekiRtynkkpqsrvkdhr 116
                 + ekk+r+++       ++ ++ +R+++kk++s  k+ r
  EPX71424.1 170 SPEKKKRLSA------LKEyANTKRLDEKKKKSLKKSSR 202
                 4444444444......33446678888887777777655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1837  (0.10246); expected 358.6 (0.02)
Passed bias filter:                      749  (0.0417759); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 1505.09
//
Query:       EPX71425.1  [L=150]
Description: ubiquitin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-33  114.5   0.5    1.3e-33  114.5   0.5    1.8  3  ubiquitin      Ubiquitin family
    1.6e-24   85.8   2.6    1.6e-24   85.8   2.6    1.8  2  Ribosomal_S27  Ribosomal protein S27a
      1e-15   57.3   0.5      1e-15   57.3   0.5    1.5  2  Rad60-SLD      Ubiquitin-2 like Rad60 SUMO-like
    1.3e-05   25.6   0.3    0.00014   22.2   0.1    2.5  2  Ubiquitin_2    Ubiquitin-like domain
     0.0013   18.8   0.2     0.0027   17.8   0.2    1.5  1  Rad60-SLD_2    Ubiquitin-2 like Rad60 SUMO-like
  ------ inclusion threshold ------
       0.01   15.7   0.0      0.015   15.2   0.0    1.3  1  TBK1_ULD       TANK binding kinase 1 ubiquitin-like domain
      0.011   16.0   0.3      0.024   15.0   0.0    1.6  2  Ubiquitin_5    Ubiquitin-like domain
      0.018   15.2   0.1      0.029   14.5   0.1    1.4  1  DUF2318        Predicted membrane protein (DUF2318)
       0.02   15.4   0.4      0.028   15.0   0.4    1.2  1  DUF2407        DUF2407 ubiquitin-like domain
      0.029   14.4   0.7        8.7    6.5   0.0    2.4  2  Ubiquitin_4    Ubiquitin-like domain
       0.12   11.8   0.1       0.17   11.4   0.1    1.3  1  DUF4925        Domain of unknown function (DUF4925)
       0.17   12.1   1.7       0.27   11.4   1.1    1.6  2  Auto_anti-p27  Sjogren's syndrome/scleroderma autoantigen 1 (


Domain annotation for each model (and alignments):
>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.5   0.5     9e-37   1.3e-33       1      72 []       3      74 ..       3      74 .. 0.99
   2 ?   -3.0   0.1       4.2   6.3e+03      23      31 ..      90      98 ..      85     108 .. 0.58
   3 ?   -2.7   0.0       3.5   5.2e+03      54      64 ..     103     113 ..      99     117 .. 0.76

  Alignments for each domain:
  == domain 1  score: 114.5 bits;  conditional E-value: 9e-37
                EEEEETTSEEEEEEEETTSBHHHHHHHHHHHHTSSGGGEEEEETTEEE-TTSBHGGHTTSTTEEEEEEESSC CS
   ubiquitin  1 itvktldgkkitleveesdtveelKekiaekegipaeqqrLiysGkvLedertleeygiqdgstlhlvlrlr 72
                i+vktl+gk+itleve+sdt++++K ki++kegip++qqrLi++Gk+Led rtl++y+iq++stlhlvlrlr
  EPX71425.1  3 IFVKTLTGKTITLEVESSDTIDNVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74
                9********************************************************************986 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 4.2
                HHHHHHHHH CS
   ubiquitin 23 elKekiaek 31
                ++K+k  + 
  EPX71425.1 90 KIKHKHKKV 98
                455544433 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 3.5
                 HGGHTTSTTEE CS
   ubiquitin  54 leeygiqdgst 64 
                 l++y+++d+  
  EPX71425.1 103 LKYYKVEDDGS 113
                 67888888754 PP

>> Ribosomal_S27  Ribosomal protein S27a
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.2       9.4   1.4e+04      11      18 ..      89      96 ..      87      97 .. 0.76
   2 !   85.8   2.6   1.1e-27   1.6e-24       1      45 []     102     145 ..     102     145 .. 0.99

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 9.4
                   SSEEESS- CS
  Ribosomal_S27 11 gkverlrk 18
                   +k+++++k
     EPX71425.1 89 KKIKHKHK 96
                   58888887 PP

  == domain 2  score: 85.8 bits;  conditional E-value: 1.1e-27
                    SSSSCCESSSSSEEESS-B-SS-S-TTSBEEECTTEEEESSTTTE CS
  Ribosomal_S27   1 vlkyYkvddsgkverlrkeCpreCGaGvfMAehkdRkyCGkCglT 45 
                    vlkyYkv+d+g+v+rlr+eCp+ CGa vfMA+h dR yCG+C+lT
     EPX71425.1 102 VLKYYKVEDDGSVKRLRRECPT-CGASVFMANHGDRLYCGRCHLT 145
                    8*********************.*********************9 PP

>> Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.3   0.5   6.9e-19     1e-15       1      72 []       1      71 [.       1      71 [. 0.98
   2 ?   -2.8   0.1       3.8   5.7e+03      39      43 ..      94      99 ..      83     110 .. 0.56

  Alignments for each domain:
  == domain 1  score: 57.3 bits;  conditional E-value: 6.9e-19
                EEEEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEEETTEE--TTSBGGGSS--TTEEEEEEX CS
   Rad60-SLD  1 ikiilkgkdgkevkikVkptttvskLieayrkkkgipeeqkvrLiFDGeeLdpnstvedldiedgdtidvvi 72
                ++i++k+ +gk+++++V+++ t+ +++ + ++k+gip+ +++rLiF G++L++  t+ d+ i++++t+++v+
  EPX71425.1  1 MQIFVKTLTGKTITLEVESSDTIDNVKGKIQDKEGIPP-DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 71
                89************************************.******************************986 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 3.8
                -.TT-E CS
   Rad60-SLD 39 e.qkvr 43
                + +kv+
  EPX71425.1 94 KhKKVE 99
                223333 PP

>> Ubiquitin_2  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.1   9.4e-08   0.00014      16      80 ..      13      69 ..       2      70 .. 0.86
   2 ?   -0.2   0.0      0.94   1.4e+03      62      75 ..      98     111 ..      80     115 .. 0.69

  Alignments for each domain:
  == domain 1  score: 22.2 bits;  conditional E-value: 9.4e-08
                 EEEEEETTSBHHHHHHHHHHHH---TTCEEEEEE.-SSSSEEECSSGCCSBCCCCT--TTEEEEE CS
  Ubiquitin_2 16 serrfsksltieelKekLelitGtspasmrLqlyddkkdnevsklddddalLgsYgvkdgmrihV 80
                  +  +++s+ti+++K k++   G++p+++rL +          k  +d ++L++Y+++  +++h 
   EPX71425.1 13 ITLEVESSDTIDNVKGKIQDKEGIPPDQQRLIFA--------GKQLEDGRTLSDYNIQKESTLHL 69
                 55678899************************99........5667899*********9999995 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.94
                  GCCSBCCCCT--TT CS
  Ubiquitin_2  62 dddalLgsYgvkdg 75 
                   + a L++Y+v+d 
   EPX71425.1  98 VELAVLKYYKVEDD 111
                  46778999999885 PP

>> Rad60-SLD_2  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.2   1.8e-06    0.0027      21     104 ..      18      89 ..       2      98 .. 0.66

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 1.8e-06
                  ETT-BHHHHHHHHHHHS-TT-SSS--SCCCEEEEETTEEE-TTSBCCCCS-TTTTTTTS-EEEEEEE---SS----.XX....XXXXX CS
  Rad60-SLD_2  21 sdaatvaelkekviaqWPkdkeekpksvndlklilaGkiLennktlkelrlplgevkggvtvmHvvvrenlsekksekk....akkak 104
                  ++++t++++k k+     +dke  p  +++ +li aGk Le+ +tl++++++        +++H+v+r     kk++kk        k
   EPX71425.1  18 ESSDTIDNVKGKI-----QDKEGIP--PDQQRLIFAGKQLEDGRTLSDYNIQKE------STLHLVLRLRGGGKKRKKKtyttP---K 89 
                  5555666666665.....3444433..34569*****************54433......579***998877777766643322...3 PP

>> TBK1_ULD  TANK binding kinase 1 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.0   9.9e-06     0.015      19      53 ..      17      51 ..       4      71 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 9.9e-06
    TBK1_ULD 19 ihpyntvaifqeevakqTkiaaekQellfeghrll 53
                +++ +t++++  +++++  i++++Q l+f g++l 
  EPX71425.1 17 VESSDTIDNVKGKIQDKEGIPPDQQRLIFAGKQLE 51
                67899***************************973 PP

>> Ubiquitin_5  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.0   1.6e-05     0.024      35      93 ..      14      73 ..       5      78 .. 0.80
   2 ?   -0.8   0.1       1.3     2e+03      35      38 ..      84      87 ..      65     110 .. 0.49

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 1.6e-05
  Ubiquitin_5 35 lletkLdvtgkelvskiaeefglkensiKlilngklleldktLeeQgvknnskv.mvLkl 93
                 +le++ + t +++  ki ++ g+  ++ +li  gk+le ++tL + +++++s + +vL+l
   EPX71425.1 14 TLEVESSDTIDNVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLhLVLRL 73
                 55555556677778889999999999**********************999875467765 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 1.3
  Ubiquitin_5 35 llet 38
                 +  t
   EPX71425.1 84 TYTT 87
                 2222 PP

>> DUF2318  Predicted membrane protein (DUF2318)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.1   1.9e-05     0.029      12      63 ..      92     148 ..      80     150 .] 0.78

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 1.9e-05
     DUF2318  12 eadgkevrflvvk....ksdgklrvaldaCevCekkgYv.qegeelvCknCgvrfal 63 
                 +++ k+v++ v+k    + dg+++     C  C+ + ++ ++g++l C +C  +++l
  EPX71425.1  92 KHKHKKVELAVLKyykvEDDGSVKRLRRECPTCGASVFMaNHGDRLYCGRCHLTLKL 148
                 4456667776665333356889999999**********9899*********999876 PP

>> DUF2407  DUF2407 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.4   1.9e-05     0.028      14      72 ..      13      82 ..       6     109 .. 0.67

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 1.9e-05
     DUF2407 14 leLdipdpntttvagLkqliRerlpaelasrrLrLIyaGrlLedttslasslklpees...............v 72
                ++L+++  ++ t+ ++k  i ++    +   + rLI+aG+ Led  +l++   ++e++               +
  EPX71425.1 13 ITLEVE--SSDTIDNVKGKIQDKE--GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTlhlvlrlrgggkkrkK 82
                556666..6778889999998887..66777779**************98655554445777777665554431 PP

>> Ubiquitin_4  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.1    0.0079        12       1      32 [.       1      32 [.       1      36 [. 0.93
   2 ?    6.5   0.0    0.0058       8.7      58      86 ..      43      70 ..      39      73 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0079
  Ubiquitin_4  1 lkvtvkkldgeslevvvkqnatvkdLkkaier 32
                 +++ vk l g+++ ++v+++ t+ ++k  i+ 
   EPX71425.1  1 MQIFVKTLTGKTITLEVESSDTIDNVKGKIQD 32
                 7899***********************99986 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0058
  Ubiquitin_4 58 LsfegekLkddkaklkeygirnkselsFv 86
                 L+f g++L+ d  +l++y i+++s+l+ v
   EPX71425.1 43 LIFAGKQLE-DGRTLSDYNIQKESTLHLV 70
                 889999986.6789************976 PP

>> DUF4925  Domain of unknown function (DUF4925)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   0.00011      0.17      49     126 ..      39     115 ..       5     135 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00011
     DUF4925  49 eedeYtFsGtsvteagatvkYsGsitkkalkLdlnvtmanakelaktYklselvkgkkkivdtsggeytwketdnevl 126
                 +++  +F+G+++  + +   Y+   ++ +l+L l ++ + +k   ktY+ ++ +k k+k+v+ +  +y   e d+ v 
  EPX71425.1  39 DQQRLIFAGKQLEDGRTLSDYNI-QKESTLHLVLRLRGGGKKRKKKTYTTPKKIKHKHKKVELAVLKYYKVEDDGSVK 115
                 77888999999987777688874.4678999*************************************9999999874 PP

>> Auto_anti-p27  Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       7.2   1.1e+04       4      14 ..      47      57 ..      46      59 .. 0.76
   2 ?   11.4   1.1   0.00018      0.27      16      39 ..     119     142 ..     117     143 .. 0.75

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 7.2
  Auto_anti-p27  4 gelLlkGwtML 14
                   g+ L  G t+ 
     EPX71425.1 47 GKQLEDGRTLS 57
                   78899998886 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00018
  Auto_anti-p27  16 etCpvCgvPLmrdrkggkvyCvaC 39 
                      Cp+Cg+  +   +g ++yC +C
     EPX71425.1 119 RECPTCGASVFMANHGDRLYCGRC 142
                    68****6555555567899**999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       986  (0.0549947); expected 358.6 (0.02)
Passed bias filter:                      629  (0.0350828); expected 358.6 (0.02)
Passed Vit filter:                        92  (0.00513135); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1102.53
//
Query:       EPX71426.1  [L=391]
Description: sec14 cytosolic factor family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.3e-38  132.3   0.0    2.2e-38  131.5   0.0    1.4  1  CRAL_TRIO    CRAL/TRIO domain
    3.5e-07   30.5   0.1    5.7e-07   29.8   0.1    1.3  1  CRAL_TRIO_2  Divergent CRAL/TRIO domain
  ------ inclusion threshold ------
      0.037   14.2   0.0        0.1   12.8   0.0    1.7  1  DUF1296      Protein of unknown function (DUF1296)
      0.092   13.0   0.0       0.21   11.8   0.0    1.5  1  PIN_10       PIN like domain
       0.11   12.7   0.3        1.5    9.1   0.0    2.8  2  CRAL_TRIO_N  CRAL/TRIO, N-terminal domain


Domain annotation for each model (and alignments):
>> CRAL_TRIO  CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.5   0.0   6.2e-42   2.2e-38       3     159 .]     136     293 ..     134     293 .. 0.92

  Alignments for each domain:
  == domain 1  score: 131.5 bits;  conditional E-value: 6.2e-42
   CRAL_TRIO   3 ileggkvgihgrDkegrpvlylrlgrfdpkklsleelvralvlvlerllkelee.......dgqvegvtvviDlkglslskmlwkpisllkkilkilqd 94 
                 +l++gkv+++grD ++rp++y+r++ ++p+k +++ l +++++ +e++ + l              +v v++Dl+++sls+m+   +s++k+++ +l+ 
  EPX71426.1 136 QLRTGKVTMLGRDLKDRPICYIRAHLHQPSKETQKSLREMTIWAMETIRLFLHSqptlqasIDDPQNVNVLFDLSKFSLSNMD---YSFVKYLSSCLEL 231
                 6799**************************9999999999999999998855555667666333468****************...************* PP

   CRAL_TRIO  95 nyperlgkilivnaPklfkfafklvkpfldektreKikfvspsnteatlekyidpeqlpkelGGt 159
                 +ype lg ++++++P++f+ +++++k+++++++reKi+f+++s++   le+yid++ +p++lGG+
  EPX71426.1 232 YYPESLGVCILHKSPWIFRSIWNIIKGWIKPEIREKIVFTQNSKD---LENYIDRSVIPASLGGD 293
                 ****************************************88776...****************6 PP

>> CRAL_TRIO_2  Divergent CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.8   0.1   1.6e-10   5.7e-07       6     135 ..     156     300 ..     151     303 .. 0.80

  Alignments for each domain:
  == domain 1  score: 29.8 bits;  conditional E-value: 1.6e-10
  CRAL_TRIO_2   6 vfiaafllsska.............dldkllryvlhtladkivgke.yvlVyfhtglssenkpslswlkkvystlprrykknlkklyivhpstfvktl 89 
                  +++a   ++sk+             +  +l+ + + tl   i +++   ++++ +++s  +++++s++k + s+l+  y++ l   +++ + + ++++
   EPX71426.1 156 YIRAHLHQPSKEtqkslremtiwamETIRLFLHSQPTLQASIDDPQnVNVLFDLSKFS-LSNMDYSFVKYLSSCLELYYPESLGVCILHKSPWIFRSI 252
                  4444444444444455555556555666777788889988899999999*******99.6***********************999998888999999 PP

  CRAL_TRIO_2  90 lktvlsafvsskfrkkveyvsrleeLarkidrtqllkslP...egvvsh 135
                     + + + +++ r+k+++  + ++L  +idr  ++ sl+   + ++++
   EPX71426.1 253 W-NIIKGWIKPEIREKIVFTQNSKDLENYIDRSVIPASLGgdsQHTYQY 300
                  9.78888889999**************************9666666666 PP

>> DUF1296  Protein of unknown function (DUF1296)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   2.8e-05       0.1      25      44 ..      85     104 ..      75     107 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2.8e-05
     DUF1296  25 yamLkecnmDpneavqkLLs 44 
                    Lk c+mDp++a  kLL+
  EPX71426.1  85 IRFLKSCQMDPDQASLKLLN 104
                 5689**************97 PP

>> PIN_10  PIN like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   5.8e-05      0.21      22      59 ..     111     148 ..      97     154 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 5.8e-05
      PIN_10  22 eeeghevvhlrdkfaagtkDeeWiaalaeggwvvltkD 59 
                 e+   evv + ++fa++t De+ i++l+ g+  +l +D
  EPX71426.1 111 ESNVDEVVEHGELFAKETNDEQFIRQLRTGKVTMLGRD 148
                 445589*****************************999 PP

>> CRAL_TRIO_N  CRAL/TRIO, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.0   0.00042       1.5      19      48 ..      68      98 ..      50     104 .. 0.82
   2 ?   -0.1   0.1      0.31   1.1e+03      36      41 ..     372     377 ..     370     378 .. 0.92

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00042
  CRAL_TRIO_N 19 eekfW.ltredhddaclLRfLRArkwdvekA 48
                 +++f  + + d +da+l+RfL+  + d ++A
   EPX71426.1 68 RNSFIrFAKCDSPDAILIRFLKSCQMDPDQA 98
                 56677777889***********999998888 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.31
  CRAL_TRIO_N  36 RfLRAr 41 
                  ++LRAr
   EPX71426.1 372 KYLRAR 377
                  8****9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (391 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       626  (0.0349155); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2831.30
//
Query:       EPX71427.1  [L=156]
Description: DASH complex subunit Dam1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.8e-23   80.2   1.4    9.7e-23   79.7   0.3    1.9  2  DASH_Dam1       DASH complex subunit Dam1
     0.0021   17.5   0.3     0.0024   17.4   0.3    1.1  1  ZnuA            Zinc-uptake complex component A periplasmic
  ------ inclusion threshold ------
       0.12   12.2   0.2       0.19   11.6   0.2    1.3  1  Phage_sheath_1  Phage tail sheath protein subtilisin-like dom
       0.21   11.4   2.8        4.3    7.1   1.1    2.2  2  Tom22           Mitochondrial import receptor subunit Tom22
       0.27   11.7   3.2        2.2    8.8   2.2    2.2  2  H-kinase_dim    Signal transducing histidine kinase, homodime


Domain annotation for each model (and alignments):
>> DASH_Dam1  DASH complex subunit Dam1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.7   0.3   2.7e-26   9.7e-23       2      56 .]      34      88 ..      26      88 .. 0.98
   2 ?   -2.9   0.0       1.8   6.3e+03      21      29 ..      94     102 ..      92     104 .. 0.60

  Alignments for each domain:
  == domain 1  score: 79.7 bits;  conditional E-value: 2.7e-26
   DASH_Dam1  2 epafaeLaDsletLdknledLqqihesLsdfNeSFasfLYGLnmnafcvdFpeaP 56
                ++++a L D +++++k++++L+ ++ +L++fNeSFasfLYGL++nafcvd+++aP
  EPX71427.1 34 ANSLAALDDGVNEFRKRMNQLSVTKHNLDTFNESFASFLYGLQINAFCVDYENAP 88
                5789**************************************************9 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.8
   DASH_Dam1  21 dLqqihesL 29 
                  Lq+i+++L
  EPX71427.1  94 SLQKIKDQL 102
                 466666665 PP

>> ZnuA  Zinc-uptake complex component A periplasmic
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.3   6.6e-07    0.0024     122     218 ..      24     131 ..       6     148 .. 0.75

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 6.6e-07
                 HHHHHHHHHHHHHHHHHH...HHHHHHHTTSSGTEGEEEESSSTTHHHHHHTT-EEEEEE.SSSSS........HHHHHHHHHHHHHTT-SEEEEET.T CS
                 xxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxx........xxxxxxxxxxxxxxxxxxxxxxx.x RF
        ZnuA 122 dtyeanaaayiekLeeld...aeireelaeipeekrklvtthdafgylarayglevagia.giste........aaqiaalieeikeagvkaifvep.l 207
                 +++  n+++++++L +ld   +e+r++++++   k +l t++++f+ +   ygl++ ++    ++         ++   +l+ e+++++ + if+ + +
  EPX71427.1  24 NAIPPNLKTFANSLAALDdgvNEFRKRMNQLSVTKHNLDTFNESFASFL--YGLQINAFCvDYENAplaesaslQKIKDQLKMEVQSRQSQQIFASSsN 120
                 446678899999999888444699999999999999************5..****99886555544999966633333467777888999999998844 PP

                 S-THHHHHHHH CS
                 xxxxxxxxxxx RF
        ZnuA 208 aspklaetlae 218
                 + ++ a+++ +
  EPX71427.1 121 SGNRHAQEMNA 131
                 46666666655 PP

>> Phage_sheath_1  Phage tail sheath protein subtilisin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.2   5.4e-05      0.19      11      86 ..      68     143 ..      55     152 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 5.4e-05
                     HHHHGTTS--SEEE-GG......GTCS-HHHHHHHHHHHHHHHHHCH-SSEEEEES-HHHHSSS.HHHHHCTTTTEEEE--E CS
  Phage_sheath_1  11 aldalegekfnlliapg......ddaednevatevqafakrsrenegldaiaviappgtttieqaaarakadnegiinvsst 86 
                     +++ l+g ++n +++++      + a+ +++++ ++  ++     + ++++a  +++g+  +++ +a a+   ++++++  t
      EPX71427.1  68 FASFLYGLQINAFCVDYenaplaESASLQKIKDQLKMEVQ---SRQSQQIFASSSNSGNRHAQEMNASAV---DETFTTNDT 143
                     566779*************999999999*******99777...555799*********888888888888...777777655 PP

>> Tom22  Mitochondrial import receptor subunit Tom22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.012        44      35      68 ..      12      46 ..       2      78 .. 0.62
   2 ?    7.1   1.1    0.0012       4.3       4      58 ..      95     148 ..      93     151 .. 0.77

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.012
       Tom22 35 dsdseissded.ddfdvedEtlldRivALkDiipp 68
                ++d++i+++ed + + ++  t+++ ++AL D +  
  EPX71427.1 12 KNDDNIEESEDsNAIPPNLKTFANSLAALDDGVNE 46
                45666664344145555678999999999997753 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0012
       Tom22   4 ltevedeefqeeqegeeeelaeededeadetdsdseissdedddfdvedEtlldR 58 
                 l++++d+ ++e q+++++++ ++++++ + + ++ +  s  d++f ++d ++++R
  EPX71427.1  95 LQKIKDQLKMEVQSRQSQQIFASSSNSGNRHAQEMNA-SAVDETFTTNDTSFIER 148
                 8999**9999999888888887777755544444444.4799999999999*999 PP

>> H-kinase_dim  Signal transducing histidine kinase, homodimeric domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0     0.097   3.5e+02      29      57 ..      31      56 ..      27      75 .. 0.72
   2 ?    8.8   2.2    0.0006       2.2      25      66 ..      92     133 ..      89     135 .. 0.92

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.097
  H-kinase_dim 29 nqsleefrfenglkasvtelksslqnlgr 57
                  + ++++++    l+  v+e+++ +++l+ 
    EPX71427.1 31 KTFANSLA---ALDDGVNEFRKRMNQLSV 56
                  55566666...667778888888887764 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.0006
  H-kinase_dim  25 karLnqsleefrfenglkasvtelksslqnlgrisgeLQegv 66 
                    a+L+++ +++++e ++++s + ++ss+++  r ++e+  ++
    EPX71427.1  92 SASLQKIKDQLKMEVQSRQSQQIFASSSNSGNRHAQEMNASA 133
                   689**********************************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1182  (0.0659267); expected 358.6 (0.02)
Passed bias filter:                      559  (0.0311785); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1105.09
//
Query:       EPX71428.1  [L=379]
Description: WD repeat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.3e-08   33.4   0.4       0.12   13.3   0.0    5.0  4  WD40         WD domain, G-beta repeat
    1.4e-07   31.7   0.0      0.044   14.1   0.0    4.4  6  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
     0.0029   16.6   0.1       0.98    8.3   0.0    3.0  3  Ge1_WD40     WD40 region of Ge1, enhancer of mRNA-decapping p
  ------ inclusion threshold ------
      0.083   12.8   0.9        1.9    8.4   0.0    3.2  4  BBS2_N       Ciliary BBSome complex subunit 2, N-terminal
        0.2   11.5   0.0       0.45   10.4   0.0    1.6  1  eIF2A        Eukaryotic translation initiation factor eIF2A


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.1      0.06   2.2e+02      16      32 ..      11      27 ..       3      28 .. 0.85
   2 ?    1.1   0.1      0.23   8.4e+02       9      38 .]     128     179 ..     120     179 .. 0.47
   3 !    9.2   0.0   0.00064       2.3       3      34 ..     185     217 ..     183     222 .. 0.75
   4 !   13.3   0.0   3.3e-05      0.12       9      37 ..     239     265 ..     227     266 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.06
                EEEETTSSEEEEEETTS CS
        WD40 16 lafspdgawlasGsdDg 32
                ++f++d+++l+ G++Dg
  EPX71428.1 11 CDFNQDSNLLSVGTYDG 27
                789*******99*9998 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.23
                 SS.SSEEEEEEETTSSE.......................EEEEETTSEEEEEE CS
        WD40   9 GH.ssvtslafspdgaw.......................lasGsdDgtvriWd 38 
                 G  +sv+sl  sp++a                        la ++  g v iWd
  EPX71428.1 128 GNlFSVCSL--SPNSANcylaypdtetkdtrpeqdassaaLANSTVSGRVIIWD 179
                 666668888..4444432233333333333333333333344455577777776 PP

  == domain 3  score: 9.2 bits;  conditional E-value: 0.00064
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtv 34 
                  ++t+ +H ++ + l f+ dg++la++s++g +
  EPX71428.1 185 EVTTIQAHkDPLSILEFNADGTLLATASENGRI 217
                 6778899955577777***********985544 PP

  == domain 4  score: 13.3 bits;  conditional E-value: 3.3e-05
                 SSSSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   9 GHssvtslafspdgawlasGsdDgtvriW 37 
                 ++  ++s+af+pd+++la +s  +tv+i+
  EPX71428.1 239 AQ--IYSIAFHPDSTLLAVSSSTQTVHIY 265
                 33..9************966559999997 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.64   2.3e+03      46      61 ..      13      28 ..       4      53 .. 0.83
   2 ?   -3.2   0.0       3.1   1.1e+04      60      76 ..      70      86 ..      59      91 .. 0.68
   3 ?   -2.7   0.0       2.1   7.4e+03      53      77 ..     103     125 ..      93     134 .. 0.69
   4 !   14.1   0.0   1.2e-05     0.044      28      78 ..     185     234 ..     165     238 .. 0.82
   5 !   13.8   0.0   1.5e-05     0.055      26      69 ..     226     269 ..     225     281 .. 0.90
   6 ?   -0.3   0.0      0.39   1.4e+03      10      26 ..     344     360 ..     335     362 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.64
  ANAPC4_WD40 46 WkpdgklLavaysdge 61
                 +++d +lL v++ dg 
   EPX71428.1 13 FNQDSNLLSVGTYDGY 28
                 7899999999999984 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 3.1
  ANAPC4_WD40 60 gevrlldaesgkvvhsl 76
                  +++l++ ++g+++ +l
   EPX71428.1 70 RKLKLVNTKKGTTICEL 86
                 36777777777777655 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 2.1
  ANAPC4_WD40  53 Lavaysdgevrlldaesgkvvhsls 77 
                  Lav   + ++ ++d+++  ++h+++
   EPX71428.1 103 LAV--LEEQIYVYDISNMLLLHTIE 125
                  333..34567778888877777775 PP

  == domain 4  score: 14.1 bits;  conditional E-value: 1.2e-05
  ANAPC4_WD40  28 rvwtleedkedsevrsLaWkpdgklLavaysdg.evrlldaesgkvvhslsv 78 
                  +v t+  ++++   + L+++ dg+lLa a ++g  +r++++ sg+ + +++ 
   EPX71428.1 185 EVTTI--QAHKDPLSILEFNADGTLLATASENGrIIRVYSIPSGERLYQFRR 234
                  44555..678888899*****************668*********9998865 PP

  == domain 5  score: 13.8 bits;  conditional E-value: 1.5e-05
  ANAPC4_WD40  26 gqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaes 69 
                  g+r++++ + +   ++ s+a++pd +lLav+ s  +v+++  ++
   EPX71428.1 226 GERLYQFRRGSLPAQIYSIAFHPDSTLLAVSSSTQTVHIYRLSN 269
                  78999999999999*************************98876 PP

  == domain 6  score: -0.3 bits;  conditional E-value: 0.39
  ANAPC4_WD40  10 iAlatedgellvfRlng 26 
                  i +at dg+l++fR+n 
   EPX71428.1 344 INVATFDGNLYAFRINT 360
                  778999********996 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0   0.00027      0.98     183     216 ..     188     223 ..     169     234 .. 0.77
   2 !    4.7   0.0    0.0035        13     189     221 ..     240     272 ..     225     279 .. 0.85
   3 ?   -1.1   0.0      0.21   7.4e+02     191     218 ..     333     360 ..     314     366 .. 0.79

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00027
    Ge1_WD40 183 kieehs.liveaafspdGtalatasedGe.vkffqv 216
                  i+ h   ++   f +dGt latase+G  ++ + +
  EPX71428.1 188 TIQAHKdPLSILEFNADGTLLATASENGRiIRVYSI 223
                 45555435677789**************62566665 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.0035
    Ge1_WD40 189 liveaafspdGtalatasedGevkffqvylede 221
                 +i + af pd t la++s+  +v+ +++  + +
  EPX71428.1 240 QIYSIAFHPDSTLLAVSSSTQTVHIYRLSNHSS 272
                 688899*******************99877655 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 0.21
    Ge1_WD40 191 veaafspdGtalatasedGevkffqvyl 218
                 ++ afs++   + +a+ dG +  f+++ 
  EPX71428.1 333 STVAFSSENPGINVATFDGNLYAFRINT 360
                 5678999999999999999999998876 PP

>> BBS2_N  Ciliary BBSome complex subunit 2, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.72   2.6e+03      65      93 ..      14      42 ..       6      48 .. 0.76
   2 ?   -1.2   0.0      0.52   1.9e+03      65      86 ..      96     117 ..      61     123 .. 0.73
   3 ?    8.4   0.0   0.00053       1.9       6      61 ..     160     212 ..     158     220 .. 0.85
   4 ?   -0.5   0.0      0.33   1.2e+03       5      30 ..     246     271 ..     244     289 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.72
      BBS2_N 65 kqekdiLligtqtnllaYdveeNsdlFyk 93
                +q++++L +gt +   +Y+ +    +Fyk
  EPX71428.1 14 NQDSNLLSVGTYDGYKIYNCDPFGKCFYK 42
                45677888888888888877777777776 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.52
      BBS2_N  65 kqekdiLligtqtnllaYdvee 86 
                 k ++  Ll   ++++ +Yd+ +
  EPX71428.1  96 KLNRKRLLAVLEEQIYVYDISN 117
                 5567778888889999999975 PP

  == domain 3  score: 8.4 bits;  conditional E-value: 0.00053
      BBS2_N   6 dgshpclaaattagkvlihnphekeqklkserlsasesevslLninkevtalaagk 61 
                 d s ++la +t +g+v+i+++   ++ +   +++a+++ +s+L++n + t la+++
  EPX71428.1 160 DASSAALANSTVSGRVIIWDAALCKEVT---TIQAHKDPLSILEFNADGTLLATAS 212
                 778899**************98887433...4688899*********999999986 PP

  == domain 4  score: -0.5 bits;  conditional E-value: 0.33
      BBS2_N   5 fdgshpclaaattagkvlihnpheke 30 
                 f +  + la++++++ v i+   +++
  EPX71428.1 246 FHPDSTLLAVSSSTQTVHIYRLSNHS 271
                 66677789999999999999865554 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00012      0.45     123     164 ..     171     214 ..     163     233 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00012
                 SS-EEEEEETTTTEEEEEEE-TT..--EEEE-TTSSEEEEEE-T CS
       eIF2A 123 laGeleiwdvkkkkkiakaeaan..atlvewspdgryvlTatta 164
                 ++G++ iwd   +k++++++a +   + +e++ dg++++Ta+  
  EPX71428.1 171 VSGRVIIWDAALCKEVTTIQAHKdpLSILEFNADGTLLATASEN 214
                 679********99999998876533699*************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (379 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       383  (0.021362); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 2586.75
//
Query:       EPX71429.1  [L=196]
Description: pho88 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-66  223.1   0.0    1.8e-66  222.9   0.0    1.0  1  Pho88     Phosphate transport (Pho88)


Domain annotation for each model (and alignments):
>> Pho88  Phosphate transport (Pho88)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  222.9   0.0   9.9e-71   1.8e-66       1     170 [.       1     171 [.       1     185 [. 0.93

  Alignments for each domain:
  == domain 1  score: 222.9 bits;  conditional E-value: 9.9e-71
       Pho88   1 mnpqvtnlviilvlmqvskkidfedpevllyvRilYvvsqliillvylyikskikkknDlttlkyvepasplske.eeklvttTvkdYDlaelkkllks 98 
                 mn+qv nlv  l++mq+sk++dfedp+v++y+R++Yv+s++ii++vy +i+++i ++nD+t l y+ep++p+s++ ++k vttTvkdYD ++l+k+ ks
  EPX71429.1   1 MNAQVLNLVAALGVMQYSKRLDFEDPQVVYYARAAYVISNAIIFGVYTLIQTRISSNNDRTPLIYEEPPAPFSGQtTGKRVTTTVKDYDNEQLQKAKKS 99 
                 9**************************************************************************9*********************** PP

       Pho88  99 ilmgvammafmhlymkytnPLllQsimplknllesnlvkihllgkpaegdLkRPFkaaagllgaaeaktdkk 170
                 +++gvammafmhlym+y++PL+lQsi+pl +l++++l+ i++lgk+aeg+L+RPF a+ gl+++a++   + 
  EPX71429.1 100 SMIGVAMMAFMHLYMGYAQPLVLQSILPLIGLFTNQLTSIYILGKAAEGSLARPFAASGGLFNNANKSAPAT 171
                 **************************************************************8763333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       587  (0.0327403); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 1273.12
//
Query:       EPX71430.1  [L=346]
Description: eukaryotic protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   1.3e-110  369.4   0.0   1.6e-110  369.1   0.0    1.1  1  Q_salvage  Potential Queuosine, Q, salvage protein family


Domain annotation for each model (and alignments):
>> Q_salvage  Potential Queuosine, Q, salvage protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  369.1   0.0    9e-115  1.6e-110       1     282 []      51     346 .]      51     346 .] 0.97

  Alignments for each domain:
  == domain 1  score: 369.1 bits;  conditional E-value: 9e-115
   Q_salvage   1 lhpkkakestvdfifvvdlLNFsFWseke......eeerfaveykgkkytgYwsLvaalkraleegipitdpeflskete...eelkkvfrsateeeip 90 
                 lhpk+++++t+d+if++d+LNFsFWs+ +      +  rf v+ykg+ ytgYwsL+aa+++al+++ipit+p+f+++et    + ++++f+s+t+e++p
  EPX71430.1  51 LHPKSQDSHTLDWIFLIDILNFSFWSDADtrdsgnHPARFGVRYKGNLYTGYWSLCAAINKALDNNIPITTPSFYANETLcpdDLIASIFASDTKEPVP 149
                 79**999*******************998889998999*****************************************999999************** PP

   Q_salvage  91 lleeRlellreagkvllekfdgsfvnlikkanksaakLvnlvveefpsFrDeavyegkkvrlyKRAqilvaDlwaafegeglgefedidkltmfADyrv 189
                 ll+eR++++r +gk+ll++ +g+fv+l++++n+sa+k+++l++++fp FrD + y+g+ ++++KRAqilva++wa+f+g+++g+f+did++tmfADyrv
  EPX71430.1 150 LLDERIRIMRASGKALLKHHRGRFVHLLETCNHSAQKFLELLLQDFPDFRDISLYKGRDCYILKRAQILVAETWACFHGQSYGRFDDIDSITMFADYRV 248
                 *************************************************************************************************** PP

   Q_salvage 190 pqvLrqlgvLeyseeLekklkekellesgseeeveiRacsiwavelireeiekkkeeakekvnailiDffLwdlakelekee...........iphhrt 277
                 pq+L qlg+L+ys+e+e++l+++el+++++ +e+e+R+csiwavel+r++ ++k+      +nai+iDffLwd+ake+++++           +p  r+
  EPX71430.1 249 PQILWQLGCLDYSSEFESRLRKSELIAHNDPMEIEMRGCSIWAVELVRQAANRKN------LNAIMIDFFLWDMAKEWQATGysphqeralssVPSIRV 341
                 *************************************************999755......89****************99445678899999****** PP

   Q_salvage 278 rsiyY 282
                 rsiyY
  EPX71430.1 342 RSIYY 346
                 ****9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (346 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       338  (0.0188521); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2599.30
//
Query:       EPX71431.1  [L=273]
Description: metaxin 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.7e-14   51.1   0.3    1.8e-13   50.1   0.3    1.6  1  GST_C_6   Glutathione S-transferase, C-terminal domain
    1.4e-05   25.3   0.9    4.9e-05   23.6   0.9    1.9  1  Tom37     Outer mitochondrial membrane transport complex prot
    3.6e-05   24.4   0.1    0.00014   22.6   0.1    2.0  1  GST_N_4   Glutathione S-transferase N-terminal domain
  ------ inclusion threshold ------
      0.091   12.8   0.1       0.24   11.5   0.1    1.6  1  GST_C_2   Glutathione S-transferase, C-terminal domain


Domain annotation for each model (and alignments):
>> GST_C_6  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.1   0.3     4e-17   1.8e-13       1      64 []     192     256 ..     192     256 .. 0.96

  Alignments for each domain:
  == domain 1  score: 50.1 bits;  conditional E-value: 4e-17
     GST_C_6   1 akkdleaLselLgdkkyFfG.dkPtslDAlvFGhlaqilytplespelrellkeypNLvayceri 64 
                 a +++++Ls+lLg+ +yFf+ d+P+ lD ++F+h  +il+ pl++ +lr  l++++NL+++++r+
  EPX71431.1 192 AARAFSSLSSLLGNLTYFFDkDSPSILDISLFSHAELILHLPLKNDQLRLSLTSNKNLLELANRV 256
                 5789****************999**************************************9996 PP

>> Tom37  Outer mitochondrial membrane transport complex protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   0.9   1.1e-08   4.9e-05       2     119 ..      59     161 ..      58     166 .. 0.76

  Alignments for each domain:
  == domain 1  score: 23.6 bits;  conditional E-value: 1.1e-08
       Tom37   2 laviaylkllalapfevvessnpslsptgeLPaLkdgegtwisgfdnIveylrkkseesdldaslsakekadatA.lisllesklaplllyslyvnsen 99 
                 l+ ++ +kl+   ++ +   s   +sp +++P+L++ + +++   ++ + +l             ++++ +++ A ++sll+  ++ +l+ys+y+++ n
  EPX71431.1  59 LQWQTWIKLYDP-EIILLSVS-DHASPDQNMPFLQVVS-HKVVLKNSLLLHLV------------NDEQILQTIApWMSLLTGPIHIALEYSMYLDETN 142
                 566666665554.34333333.5679999999999988.66666666666666............467888888757********************** PP

       Tom37 100 yekvTrpayskllpfPlnyi 119
                 +++    +++k+  +Pln++
  EPX71431.1 143 FKELQNHWFTKA-TWPLNIV 161
                 **********87.6999986 PP

>> GST_N_4  Glutathione S-transferase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.1   3.1e-08   0.00014       2      99 .]      57     142 ..      56     142 .. 0.80

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 3.1e-08
     GST_N_4   2 fclkletyLrmagipyelepssnemhaspkgklPfiel.ngelliadsefiieflkekgvdldaelseeqkadaralkalveeklynallyerwldpen 99 
                 ++l+++t+ ++ + +  l  +s+  hasp++++Pf+++ +++ ++   + ++ +l+++  ++   l+     +   +++l++  ++ al y ++ld++n
  EPX71431.1  57 ESLQWQTWIKLYDPEIILLSVSD--HASPDQNMPFLQVvSHK-VVLK-NSLLLHLVNDE-QI---LQ-----TIAPWMSLLTGPIHIALEYSMYLDETN 142
                 579****************9999..9************7777.7777.67777777665.33...22.....356788888888888888888888876 PP

>> GST_C_2  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   5.3e-05      0.24      10      43 ..     191     225 ..     175     231 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 5.3e-05
                 HCCHCHHHCTTT---SS..CTTCS--HHHHHHHHH CS
     GST_C_2  10 qldaaldaleahLadsp.flfGdqptlaDialapf 43 
                  + +a++ l+++L+  + f+  d p++ Di+l+ +
  EPX71431.1 191 DAARAFSSLSSLLGNLTyFFDKDSPSILDISLFSH 225
                 57889999******999999999**********87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (273 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       328  (0.0182944); expected 358.6 (0.02)
Passed bias filter:                      262  (0.0146132); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1895.78
//
Query:       EPX71432.1  [L=180]
Description: hypothetical protein SOCG_01650 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0091   15.4   1.2     0.0091   15.4   1.2    2.1  2  Rtf2        Rtf2 RING-finger
  ------ inclusion threshold ------
       0.18   10.5   5.0       0.21   10.2   0.2    2.1  2  DUF3723     Protein of unknown function (DUF3723)
       0.44    9.4   9.3       0.55    9.1   9.3    1.1  1  PA26        PA26 p53-induced protein (sestrin)
        1.1    9.3   8.8       0.66   10.0   3.5    2.6  3  DUF4570     Domain of unknown function (DUF4570)


Domain annotation for each model (and alignments):
>> Rtf2  Rtf2 RING-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4  22.8       1.1   4.9e+03     179     241 ..      10      72 ..       6      77 .. 0.59
   2 !   15.4   1.2     2e-06    0.0091     163     253 ..      78     163 ..      73     175 .. 0.74

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 1.1
        Rtf2 179 karleeekakkkkkkkakkkkkakakgskaeaeaaskssseasesskagkkkekkkekkkrsl 241
                 k  +++e+++++++k++k +kk++++ +k+++e ++++ss+++ ++k++k+  k ++kk++++
  EPX71432.1  10 KSSIKKEAESQHSNKNNKPSKKDTSNLTKKRKEGKEQTSSDNKDDKKNQKNDGKPQTKKAKKE 72 
                 667788888888888888888888888887777777766666433333333333332222222 PP

  == domain 2  score: 15.4 bits;  conditional E-value: 2e-06
        Rtf2 163 edviplnptkeelellkarleeekakkkkkkkakkkkkakakgskaeaeaaskssseasesskagkkkekkkekkkrslaekneksevyks 253
                 +d+i l ++ke+lel+k+   +e+   k+ k++k+ k+ ++++s+  +  ++ +s     +    ++k +++  +++s+++++e++e+ +s
  EPX71432.1  78 KDIIDLGGSKEDLELIKDIGSDEEIDPKQDKNKKSFKAGEDSESSLLQDLSKFAS-----QLGFAQDKFDERAYDSESVEDDSENEEASSS 163
                 79*****************************989988888888886666644332.....3445555555555666666666666666554 PP

>> DUF3723  Protein of unknown function (DUF3723)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   1.0     0.013        60     435     482 ..      34      81 ..       7      90 .. 0.72
   2 ?   10.2   0.2   4.7e-05      0.21     353     392 ..     103     143 ..      98     155 .. 0.72

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.013
     DUF3723 435 aaaqpiseqeeeeelttevesekkeaRcGrPeeaayerdkkllFldkl 482
                 +  ++++++ +e+  +++ +++k+++  G+P++++ +++++ l  d +
  EPX71432.1  34 SNLTKKRKEGKEQTSSDNKDDKKNQKNDGKPQTKKAKKENETLLKDII 81 
                 444555555556777888888889999999999999999988866655 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 4.7e-05
     DUF3723 353 tprkesk.lakpavkkadevvlqelaslAvklGFksseikk 392
                 +p+++++ ++  a +++++ +lq+l ++A +lGF +++ ++
  EPX71432.1 103 DPKQDKNkKSFKAGEDSESSLLQDLSKFASQLGFAQDKFDE 143
                 445544303334445568899**************998765 PP

>> PA26  PA26 p53-induced protein (sestrin)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   9.3   0.00012      0.55     174     293 ..      12     147 ..       3     156 .. 0.73

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00012
        PA26 174 glepeldlesskklksasas...............anekedsseeeeeelerkaaaeaeaevealmermkklqeeedeeeeaseeelserf..ekeese 255
                  +++e+++++s+k +++s++               ++++++  ++++++  + ++++a++e e+l++ +  l  ++++ e +++    e++  ++++++
  EPX71432.1  12 SIKKEAESQHSNKNNKPSKKdtsnltkkrkegkeqTSSDNKDDKKNQKNDGKPQTKKAKKENETLLKDIIDLGGSKEDLELIKDIGSDEEIdpKQDKNK 110
                 56777777777777777666677777766655543334444455555666667788889999**************99998888888888854444444 PP

        PA26 256 slllaaadaeeaavasdlsryvedpefgyqdFarrgee 293
                 +++ a  +++e++  +dls++ ++  f+   F++r  +
  EPX71432.1 111 KSFKAG-EDSESSLLQDLSKFASQLGFAQDKFDERAYD 147
                 444444.57888899*****************999765 PP

>> DUF4570  Domain of unknown function (DUF4570)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.2       0.3   1.3e+03      32      53 ..      19      40 ..      10      43 .. 0.57
   2 ?   10.0   3.5   0.00015      0.66      20      62 ..      38      81 ..      27      93 .. 0.79
   3 ?    1.4   0.1     0.068     3e+02      39      68 ..     105     134 ..      90     143 .. 0.71

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.3
     DUF4570 32 eledqkkkkasqaeaskaakkR 53
                +++++k++k s+  +s+  kkR
  EPX71432.1 19 SQHSNKNNKPSKKDTSNLTKKR 40
                2233334666777777777777 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00015
     DUF4570 20 aqRalLLqqmeseledqkk.kkasqaeaskaakkRNkqllqdle 62
                ++R++  +q+ s+ +d kk +k+     +k akk N++ll+d+ 
  EPX71432.1 38 KKRKEGKEQTSSDNKDDKKnQKNDGKPQTKKAKKENETLLKDII 81
                5666666677666666666599999999999***********96 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.068
     DUF4570  39 kkasqaeaskaakkRNkqllqdleaaekel 68 
                 k+  + +  ka +    +llqdl +   +l
  EPX71432.1 105 KQDKNKKSFKAGEDSESSLLQDLSKFASQL 134
                 333444555666778899****99987776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2430  (0.135535); expected 358.6 (0.02)
Passed bias filter:                      579  (0.032294); expected 358.6 (0.02)
Passed Vit filter:                       144  (0.00803168); expected 17.9 (0.001)
Passed Fwd filter:                        45  (0.0025099); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.85u 0.36s 00:00:01.21 Elapsed: 00:00:00.52
# Mc/sec: 1042.90
//
Query:       EPX71433.1  [L=1166]
Description: mediator complex subunit Srb9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-18   66.7   0.1    4.7e-18   65.6   0.1    1.5  1  Med13_C   Mediator complex subunit 13 C-terminal domain


Domain annotation for each model (and alignments):
>> Med13_C  Mediator complex subunit 13 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.6   0.1   2.6e-22   4.7e-18       4     145 ..     901    1038 ..     900    1065 .. 0.85

  Alignments for each domain:
  == domain 1  score: 65.6 bits;  conditional E-value: 2.6e-22
     Med13_C    4 pfvLapplpkkiqfklaaepssdlleegsvLhvaYclsedqrWllaawtDnrGelletasinlnrrrrkkararrevlqelWeftlgimsktsvpWR 100 
                  ++v ++p++   +++la++ s + l ++  Lh++Y++  ++ ++l++wtD  Ge+ ++  + l      +  ++ +v+q++W++t +im+k s++W 
  EPX71433.1  901 SYVVEKPIDTLLHYRLANTCSANALFNEYTLHMTYAIVLNK-YVLCSWTDTYGEIEHFEWFVL-----YQTDQLVDVFQKIWTTTNDIMKKGSFTWY 991 
                  578899999999*****99999***************8776.*********************.....99*************************** PP

     Med13_C  101 lvigrlGrmghgelkaWssllskknlqk..psilsacLvsvepdpsL 145 
                  l i ++G ++ +el+aW ++++++  ++    ++  cL+  + +++ 
  EPX71433.1  992 LSIIKVGSLSLEELNAWKQVAETQGCMSnsKFNIGDCLIYENSKSCV 1038
                  *********************97765553333344455555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1166 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       518  (0.0288917); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.72u 0.32s 00:00:01.04 Elapsed: 00:00:00.48
# Mc/sec: 7337.06
//
Query:       EPX71434.1  [L=304]
Description: hypothetical protein SOCG_01652 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.022   14.6   1.2      0.022   14.6   1.2    1.9  2  DUF724     Protein of unknown function (DUF724)
       0.45   10.4   6.6       0.27   11.1   2.5    2.7  2  PKcGMP_CC  Coiled-coil N-terminus of cGMP-dependent protein k


Domain annotation for each model (and alignments):
>> DUF724  Protein of unknown function (DUF724)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   1.1      0.34     3e+03     134     134 ..      50      50 ..       5     102 .. 0.57
   2 ?   14.6   1.2   2.5e-06     0.022     124     187 ..     219     282 ..     204     283 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.34
      DUF724 134 e 134
                  
  EPX71434.1  50 Y 50 
                 1 PP

  == domain 2  score: 14.6 bits;  conditional E-value: 2.5e-06
      DUF724 124 ekrkleeeidelekkilelerqlallkekkeaadkeiarlkseaekleeeledveqeFeavasa 187
                 + ++ ++++++   +i+eler l   ++ + +++k ia++k++ ++l+++ + +++ F + +++
  EPX71434.1 219 STSEEDHSMEKYALRIRELERMLNDERHLNANHEKVIAEMKVHLKALRNDFQFAKKLFMNALAE 282
                 4555688999***********************************************9998775 PP

>> PKcGMP_CC  Coiled-coil N-terminus of cGMP-dependent protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1      0.94   8.4e+03       8      18 ..      53      63 ..      52      66 .. 0.66
   2 ?   11.1   2.5     3e-05      0.27       9      31 ..     233     262 ..     232     263 .. 0.75

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 0.94
   PKcGMP_CC  8 ERIRELEkrla 18
                 + +EL+  l+
  EPX71434.1 53 DKMKELDSILR 63
                57788876665 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 3e-05
   PKcGMP_CC   9 RIRELEkrlae.......kdeEIqELrskL 31 
                 RIRELE++l++        +++I+E + +L
  EPX71434.1 233 RIRELERMLNDerhlnanHEKVIAEMKVHL 262
                 9********863333333688999999888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1204  (0.0671538); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.30s 00:00:00.78 Elapsed: 00:00:00.46
# Mc/sec: 1972.60
//
Query:       EPX71435.1  [L=648]
Description: TRF Taz1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0012   19.0   0.1     0.0027   17.8   0.1    1.6  1  Myb_DNA-binding  Myb-like DNA-binding domain
     0.0098   16.1   0.2      0.036   14.3   0.1    2.0  1  Myb_DNA-bind_6   Myb-like DNA-binding domain
  ------ inclusion threshold ------
      0.045   13.9   0.2       0.15   12.3   0.2    1.9  1  SANT_DAMP1_like  SANT/Myb-like domain of DAMP1


Domain annotation for each model (and alignments):
>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.1   4.6e-07    0.0027       1      26 [.     552     577 ..     552     580 .. 0.96

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 4.6e-07
                      CSSSBHHHHHHHHHHHHHHTTCHHHH CS
  Myb_DNA-binding   1 rgkWteeEdelLleavkkhGnrWkkI 26 
                      r kWtee +  L + ++++G +W+kI
       EPX71435.1 552 RRKWTEEQERELFNMIEQYGCSWSKI 577
                      689**********************9 PP

>> Myb_DNA-bind_6  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.1   6.1e-06     0.036       1      38 [.     555     599 ..     555     601 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 6.1e-06
  Myb_DNA-bind_6   1 WteeEdeiLlklvekygndWknIaealn.......rRtpkqcfdr 38 
                     Wtee +++L +  e+yg  W++I  + +         tp++++d+
      EPX71435.1 555 WTEEQERELFNMIEQYGCSWSKIVYIQKiydkplsPFTPTHVKDK 599
                     ***********************6664444456666777777665 PP

>> SANT_DAMP1_like  SANT/Myb-like domain of DAMP1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.2   2.5e-05      0.15      20      51 ..     546     577 ..     536     613 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 2.5e-05
  SANT_DAMP1_like  20 YeellkeedWtkeetdyLfdlckeydlrfvvi 51 
                      Ye+l  +++Wt+e+ + Lf+++++y + +  i
       EPX71435.1 546 YEKLKFRRKWTEEQERELFNMIEQYGCSWSKI 577
                      666666789********************755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (648 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1876  (0.104635); expected 358.6 (0.02)
Passed bias filter:                      457  (0.0254894); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.75u 0.33s 00:00:01.08 Elapsed: 00:00:00.50
# Mc/sec: 3897.79
//
Query:       EPX71436.1  [L=249]
Description: Smc5-6 complex non-SMC subunit 2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      1e-20   73.3   0.9    1.9e-20   72.4   0.9    1.5  1  zf-Nse           Zinc-finger of the MIZ type in Nse subunit
  ------ inclusion threshold ------
      0.015   15.1   2.8      0.029   14.1   2.8    1.6  1  zf-MIZ           MIZ/SP-RING zinc finger
      0.033   14.2   1.8      0.061   13.4   1.8    1.4  1  zf-RING_UBOX     RING-type zinc-finger
        0.3   11.1   2.4        6.9    6.7   0.5    2.3  2  Phage_sheath_1C  Phage tail sheath C-terminal domain


Domain annotation for each model (and alignments):
>> zf-Nse  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.4   0.9   4.2e-24   1.9e-20       1      57 []     166     221 ..     166     221 .. 0.97

  Alignments for each domain:
  == domain 1  score: 72.4 bits;  conditional E-value: 4.2e-24
                 SXXXXXSSBXXSB-TTTSSB-SSEEEESSS--EEEHHHHHHHCTTTS-EE-SCCC-S CS
      zf-Nse   1 delaieeerislkCPltlqpfeePvtskkCpHvFEreaIlelikrkktvkCPvagCs 57 
                 d++++++++i+++CPltlqp+++Pv+skkC+H +E++aI +l   +  ++CPv+gC+
  EPX71436.1 166 DDIVMSSSTIETRCPLTLQPIVHPVISKKCNHYYEKDAIYSLA-GTSGCRCPVVGCN 221
                 9****************************************98.78889*******7 PP

>> zf-MIZ  MIZ/SP-RING zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   2.8   6.4e-06     0.029       1      24 [.     175     198 ..     175     221 .. 0.92

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 6.4e-06
                 EESB-TTTSSB-SSEEEETT--SS CS
      zf-MIZ   1 vslkCplslsrikiPvrgekCkHl 24 
                 ++++Cpl+l++i  Pv ++kC+H+
  EPX71436.1 175 IETRCPLTLQPIVHPVISKKCNHY 198
                 5789*******************7 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   1.8   1.4e-05     0.061       1      39 []     179     216 ..     179     216 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1.4e-05
  zf-RING_UBOX   1 CpIClelftdPlvl.pCGHtFCreClwelskslegafkCP 39 
                   Cp  l++  +P++  +C H + ++ +  +s  +    +CP
    EPX71436.1 179 CPLTLQPIVHPVISkKCNHYYEKDAI--YSLAGTSGCRCP 216
                   ***********44558**********..788888888888 PP

>> Phage_sheath_1C  Phage tail sheath C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.5    0.0015       6.9      18      74 ..      34      90 ..      30     104 .. 0.72
   2 ?    3.8   0.1     0.013        57      55      73 ..     106     124 ..      97     130 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0015
                     HHHHHHHHHHHHHHHHTTTSH....HHHHHHHHHHHHHHHHHHHTTSB-S--STTSEEEEC CS
  Phage_sheath_1C 18 lrddirstfkkkylgkklnnd....dgralvksalnaylkelqregaienfdnksdlevea 74
                     ++++i++ +++ +l+ +ln++    ++ +++k+ l a  + l  ++ai++ d+    +v++
       EPX71436.1 34 IEESIKQIIRTSILVVELNDNesldTLDSSIKELLDAKQRLLLLKNAIDDLDS----DVKR 90
                     799****************9956655556666666666666666666666664....3333 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.013
                      HHHTTSB-S--STTSEEEE CS
  Phage_sheath_1C  55 lqregaienfdnksdleve 73 
                       + +g++++++nksd e +
       EPX71436.1 106 QKFKGLLQDYENKSDFEKY 124
                      5679***********9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       849  (0.0473534); expected 358.6 (0.02)
Passed bias filter:                      499  (0.027832); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1782.55
//
Query:       EPX71437.1  [L=77]
Description: DASH complex subunit Dad1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-20   73.3   0.7    1.6e-20   73.0   0.7    1.1  1  DASH_Dad1  DASH complex subunit Dad1
  ------ inclusion threshold ------
      0.021   14.8   0.1      0.029   14.4   0.1    1.2  1  DASH_Dad4  DASH complex subunit Dad4


Domain annotation for each model (and alignments):
>> DASH_Dad1  DASH complex subunit Dad1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.0   0.7   1.8e-24   1.6e-20       2      54 ..      12      64 ..      11      65 .. 0.97

  Alignments for each domain:
  == domain 1  score: 73.0 bits;  conditional E-value: 1.8e-24
   DASH_Dad1  2 FerqRdrliqeIaesmeevlnnlnaLNRsLEeviavgkeFesVaaLWssFynv 54
                Fer+R++l+ +I +sm+ev+n +  LN+++E +++vgkeFe+Va+LW+ F++ 
  EPX71437.1 12 FERKRRLLTLQIGKSMNEVVNLMSVLNKNMEGINGVGKEFENVASLWKGFQDS 64
                **************************************************997 PP

>> DASH_Dad4  DASH complex subunit Dad4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.1   3.2e-06     0.029      15      58 ..      22      65 ..      12      70 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 3.2e-06
   DASH_Dad4 15 RIiknvekLnesvvelnkeleeinkkNknvelvsqlwenYqrnv 58
                 I k+++ + + +  lnk++e in   k+ e v+ lw+ +q +v
  EPX71437.1 22 QIGKSMNEVVNLMSVLNKNMEGINGVGKEFENVASLWKGFQDSV 65
                566777777788999*************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       556  (0.0310112); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.24s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 608.46
//
Query:       EPX71438.1  [L=199]
Description: rho family GTPase Rho4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.4e-51  173.5   0.0    2.9e-51  173.3   0.0    1.0  1  Ras        Ras family
    7.9e-22   77.7   0.0    1.1e-21   77.2   0.0    1.2  1  Roc        Ras of Complex, Roc, domain of DAPkinase
    1.5e-06   27.8   0.0    3.4e-06   26.6   0.0    1.5  1  Arf        ADP-ribosylation factor family
  ------ inclusion threshold ------
      0.033   13.5   0.0       0.04   13.3   0.0    1.3  1  Gtr1_RagA  Gtr1/RagA G protein conserved region
       0.05   13.0   0.0      0.076   12.4   0.0    1.2  1  SRPRB      Signal recognition particle receptor beta subunit
      0.072   13.6   0.1        0.1   13.1   0.1    1.6  1  ABC_tran   ABC transporter
        0.1   11.8   0.1       0.14   11.3   0.1    1.2  1  DAP3       Mitochondrial ribosomal death-associated protein 3


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  173.3   0.0   1.1e-54   2.9e-51       1     158 [.      12     182 ..      12     186 .. 0.97

  Alignments for each domain:
  == domain 1  score: 173.3 bits;  conditional E-value: 1.1e-54
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEET..TEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHH.HHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievd..gkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvk.kwvee 96 
                 Klv+vGd+++GKt+ll+ f +++F+e+y +T+ +++y+++i+++  gk ++l +wDTAGqee+++lr+l+y ++++ill+++i+  +s++n++ kw+ e
  EPX71438.1  12 KLVVVGDGGCGKTCLLIVFSTGTFPERYVPTV-FENYITQISYKpnGKIIELALWDTAGQEEYDRLRPLSYPNSNVILLCFSIDCPASLHNITeKWFPE 109
                 99******************************.**********9989*********************************************99***** PP

                 HHHHSTTTSEEEEEEETTTGGG............G-SS-HHHHHHHHHHHTSEEEEEBTTTTCTHHHHHHHHHH CS
         Ras  97 ikrvaeenvpivLvGnKvDlee............kravsteegeelakelglkfletSAktnenveeafeellr 158
                 +++ ++ ++p +LvG K+Dl++               v++e+++++a++++ +++e+SAk++ +++++f+ +++
  EPX71438.1 110 VQHFCP-RTPTMLVGLKSDLRQdrnaeevlrtqgLTPVTFEQAQNVASSISSPYVECSAKEASGINDVFQLAVS 182
                 ******.5************************9999*********************************98876 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.2   0.0   4.4e-25   1.1e-21       1     119 [.      12     127 ..      12     128 .. 0.87

  Alignments for each domain:
  == domain 1  score: 77.2 bits;  conditional E-value: 4.4e-25
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE...GHHHHCH. CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd...srssenl. 95 
                 K+v+vGd+g GKt+ll  f +++f e++ +t+  +++t+          + + k ++l++WDtaGqe+++ l+pl + ++++++l++      s +n+ 
  EPX71438.1  12 KLVVVGDGGCGKTCLLIVFSTGTFPERYVPTVFENYITQISY-------KPNGKIIELALWDTAGQEEYDRLRPLSYPNSNVILLCFSidcPASLHNIt 103
                 99******************************9999886432.......2345789******************************9844533445543 PP

                 HHHHHHHHHHCSSS-EEEEEE-TT CS
         Roc  96 keWlkelkkvagkspvilvgnkiD 119
                 ++W+ e+++ ++++p +lvg k D
  EPX71438.1 104 EKWFPEVQHFCPRTPTMLVGLKSD 127
                 89********************99 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.0   1.3e-09   3.4e-06       9     168 ..       5     177 ..       1     182 [. 0.73

  Alignments for each domain:
  == domain 1  score: 26.6 bits;  conditional E-value: 1.3e-09
                 TT.TTEEEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSSEE.EEEEEE....TTEEEEEEEE-SSGGGGGGGGGGCTTESEEE..EEEETT-CTTHHH CS
         Arf   9 klkkkelrilllGLDnaGKtTilkklkleelvt.tvPTigfn.veelei....knlkftvwDvGGqeklRplWknYfektdavi..fvvDsadreRlee 99 
                  +++++ +++++G  + GKt +l  ++++ + +  vPT+  n + ++++    k +++ +wD  Gqe+  +l    +++ ++++  f +D+  +  l++
  EPX71438.1   5 SKSDHSKKLVVVGDGGCGKTCLLIVFSTGTFPErYVPTVFENyITQISYkpngKIIELALWDTAGQEEYDRLRPLSYPNSNVILlcFSIDCPAS--LHN 101
                 4558889***********************977589**987747899997777789***********999999888998888762266777543..444 PP

                 HHHHHHHHCTSGCCTTSEEEEEEE-TTSTTSS-HHHHHHHTTGGGSS........SSSSEEEEEEBTTTTBTHHHHH CS
         Arf 100 akeeLkalleeeelkevallvlaNKqDlpealseeelrellgleelk........gkrkleiqkcsavkgeglkegl 168
                   e+    +++    + + ++++ K Dl+++ ++ee+ ++ gl+ ++        ++ +   ++csa + +g+++ +
  EPX71438.1 102 ITEKWFPEVQH-FCPRTPTMLVGLKSDLRQDRNAEEVLRTQGLTPVTfeqaqnvaSSISSPYVECSAKEASGINDVF 177
                 44433333333.34466777889999999999999999999999976444444335555556677777777776655 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   1.5e-05      0.04       1      87 [.      12      96 ..      12     166 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.5e-05
   Gtr1_RagA  1 kvLLmGksgsGKtsmrsiiFdnylardtlrlgatidveksevrflgnl.tlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDve 87
                k++ +G +g GKt++  +    + ++  +       +++ + + +g++ +l lwD  Gqe++      +  ++  +nv  l + +D+ 
  EPX71438.1 12 KLVVVGDGGCGKTCLLIVFSTGTFPERYVPTVFENYITQISYKPNGKIiELALWDTAGQEEYDRL---RPLSYPNSNVILLCFSIDCP 96
                78999*********985555678888888877788888888888877659**********98655...45566666677777777766 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0     3e-05     0.076       3      93 ..      10     103 ..       8     107 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 3e-05
                 --EEEEE-STTSSHHHHHHHHHHS....S---B---S.S-EEETTG...GGTT-SEEEETT-GCC.SHHHHHHHHHHGGEEEEEEEEETTS-HHHHH CS
       SRPRB   3 kpavllvGlsdsGKTslftrLttd....svkktvtSq.essaalkvksekgskltliDfPGhekl.rqklleklkaksslkglvfvvDStidpkevk 93 
                 ++++++vG   +GKT l+   +t+     + +tv     +++++k  + k  +l+l D  G+e+  r + l     +s++  l f +D  +  ++++
  EPX71438.1  10 SKKLVVVGDGGCGKTCLLIVFSTGtfpeRYVPTVFENyITQISYKP-NGKIIELALWDTAGQEEYdRLRPLS--YPNSNVILLCFSIDCPASLHNIT 103
                 578899******************5555555566555555566665.7788899999999998762333333..35666777777777777666665 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1     4e-05       0.1       9      35 ..       8      34 ..       2     160 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 4e-05
                ETTSEEEEEESTTSSHHHHHHHHTTSS CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  9 kegekvaivGenGaGKStLlkllagll 35
                 +++k+++vG+ G+GK+ Ll +++  +
  EPX71438.1  8 DHSKKLVVVGDGGCGKTCLLIVFSTGT 34
                67899***************9988765 PP

>> DAP3  Mitochondrial ribosomal death-associated protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   5.6e-05      0.14      15      41 ..       2      28 ..       1      40 [. 0.85

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 5.6e-05
                TTS-SSS---EEEEE-SSSSSTTTTHH CS
        DAP3 15 kkadkkkkvkrlvltGekgsGKSvlLl 41
                k+++k+   k+lv+ G+ g+GK+ lL+
  EPX71438.1  2 KSSSKSDHSKKLVVVGDGGCGKTCLLI 28
                67789999*****************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       493  (0.0274974); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 1525.91
//
Query:       EPX71439.1  [L=132]
Description: hypothetical protein SOCG_06090 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       394  (0.0219756); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1006.94
//
Query:       EPX71440.1  [L=203]
Description: hypothetical protein SOCG_01657 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       893  (0.0498076); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.36
# Mc/sec: 1673.40
//
Query:       EPX71441.1  [L=832]
Description: Pep5/Vps11-like zinc finger protein, partial [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-15   55.3   7.8    4.9e-15   55.3   7.8    2.9  3  zf-C3H2C3   Zinc-finger
  ------ inclusion threshold ------
       0.02   14.8   0.7       0.02   14.8   0.7    3.6  4  Clathrin    Region in Clathrin and VPS
      0.039   13.8   0.3       0.12   12.2   0.3    1.8  1  TPR_1       Tetratricopeptide repeat
        0.1   12.5   0.7       0.27   11.2   0.7    1.7  1  DUF1936     Domain of unknown function (DUF1936)
        1.3    9.0  11.7       0.35   10.8   6.7    2.7  2  zf-RING_5   zinc-RING finger domain


Domain annotation for each model (and alignments):
>> zf-C3H2C3  Zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1      0.51   1.8e+03       2      17 ..     435     451 ..     435     453 .. 0.81
   2 ?   -1.3   0.0      0.68   2.4e+03       4      11 ..     603     610 ..     601     614 .. 0.85
   3 !   55.3   7.8   1.4e-18   4.9e-15       1      35 []     765     799 ..     765     799 .. 0.99

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.51
   zf-C3H2C3   2 dnCglkLdypfv.aysC 17 
                 +nC + L  p+   y+C
  EPX71441.1 435 ENCSTELLLPILrKYKC 451
                 59****99997537999 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.68
   zf-C3H2C3   4 CglkLdyp 11 
                 C ++Ldy 
  EPX71441.1 603 CNGLLDYE 610
                 ******95 PP

  == domain 3  score: 55.3 bits;  conditional E-value: 1.4e-18
   zf-C3H2C3   1 CdnCglkLdypfvaysCkHlvHakCadeevCPkCk 35 
                 CdnC++ L+ pf  ysC+H++H++Ca e +CPkCk
  EPX71441.1 765 CDNCEGVLKIPFKTYSCLHIIHRDCASESICPKCK 799
                 **********************************7 PP

>> Clathrin  Region in Clathrin and VPS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.2       0.2   7.2e+02      76     120 ..     318     370 ..     314     380 .. 0.74
   2 ?   14.8   0.7   5.5e-06      0.02      11      86 ..     379     452 ..     372     459 .. 0.83
   3 ?   -3.2   0.0         2   7.1e+03      18      57 ..     473     510 ..     468     532 .. 0.65
   4 ?    3.1   0.1     0.022        78       3      49 ..     646     690 ..     644     708 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.2
                 HHHHHHT-SSHHHHHHHHHTTXTHSSHSS.......X.SSSSHCSCHHHHTTT CS
    Clathrin  76 vaklcekadlyeeavilykkinefkkais.......l.lkklkdfddaieyaa 120
                 ++ +c +++ +e +++l k ++++++ +        l + k++d+++ai+y++
  EPX71441.1 318 LLYKCFEKEEFEKSYLLAKYLKCTEDITRdcalrtaLlYFKEGDLKKAIDYFI 370
                 66678888999888888888888888777766666644667777777777765 PP

  == domain 2  score: 14.8 bits;  conditional E-value: 5.5e-06
                 CCCHHHHHCTT-HHHHCHHHCCHHHCHTS--HHHHHHHHHHHHHTT-HHHHHHTTSS---S-TTHHHHHHHT-SSH CS
    Clathrin  11 srvvklfeeaglleelleyLekvlkedskenpalqtallelyakyddpqeleeflkknnnydlekvaklcekadly 86 
                   ++k + e+ ll  ll yLe++++e+ +  +  q  l  ly+k ++++ l+++ k+  n+ +e ++ +++k++ +
  EPX71441.1 379 ALIIKTYLERRLLGCLLRYLEALAAEGYAY-SFEQSTLTFLYIKLQRYDSLMTYAKSE-NCSTELLLPILRKYKCF 452
                 569*********************999665.999********************8864.44666666666666655 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 2
                 HCTT-HHHHCHHHCCHHHCHTS--HHHHHHHHHHHHHTT- CS
    Clathrin  18 eeaglleelleyLekvlkedskenpalqtallelyakydd 57 
                  e+ l   ++++Le++   d ++  ++ + + +  +  d+
  EPX71441.1 473 REKTLKGKAFQLLESCH--DYMDVIEISNHYGIWFINLDP 510
                 55555566667777777..466666666666666666664 PP

  == domain 4  score: 3.1 bits;  conditional E-value: 0.022
                 CCCTTS-CCCCHHHHHCTT-HHHHCHHHCCHHHCHTS--HHHHHHHH CS
    Clathrin   3 eltdpidlsrvvklfeeaglleelleyLekvlkedskenpalqtall 49 
                 +l+dp   + +v+++ ++ +l++l+ + +++  ++ +e  +++ ++l
  EPX71441.1 646 LLKDPNTADHLVDEYDDEAMLHLLKFLVRERTVTNIRE--DIFFKIL 690
                 57899999***********************9888776..5555555 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.3   3.4e-05      0.12       8      25 ..     353     370 ..     350     373 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 3.4e-05
                 HHHHHHTT-HHHHHHHHH CS
       TPR_1   8 GnayfklgkydeAleyye 25 
                 +++yfk g++++A++y+ 
  EPX71441.1 353 ALLYFKEGDLKKAIDYFI 370
                 789*************95 PP

>> DUF1936  Domain of unknown function (DUF1936)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.7   7.4e-05      0.27       1      11 [.     794     804 ..     794     806 .. 0.94

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 7.4e-05
                 B-TTTSSSBEE CS
     DUF1936   1 lCPKCnvGkLE 11 
                 +CPKC +G LE
  EPX71441.1 794 ICPKCKSGTLE 804
                 8*********9 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.2      0.57   2.1e+03      33      42 ..      51      63 ..      25      65 .. 0.79
   2 ?   10.8   6.7   9.9e-05      0.35       2      43 ..     765     799 ..     764     800 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.57
   zf-RING_5 33 l...ekeavCpiC 42
                    +++a C++C
  EPX71441.1 51 AltnNEYALCCVC 63
                2455678999999 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 9.9e-05
   zf-RING_5   2 CnkCfeklskeekfyltsCgHifCekClkkllekeavCpiCr 43 
                 C +C   l  + +f + sC Hi++ +C++++      Cp C+
  EPX71441.1 765 CDNCEGVL--KIPFKTYSCLHIIHRDCASESI-----CPKCK 799
                 89999999..999*******************.....****8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (832 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       769  (0.0428914); expected 358.6 (0.02)
Passed bias filter:                      463  (0.0258241); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.72u 0.28s 00:00:01.00 Elapsed: 00:00:00.49
# Mc/sec: 5090.74
//
Query:       EPX71442.1  [L=142]
Description: transcription coactivator PC4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-22   79.0   0.1    2.4e-22   78.3   0.1    1.3  1  PC4         Transcriptional Coactivator p15 (PC4)
  ------ inclusion threshold ------
      0.041   13.3  10.9      0.056   12.8  10.9    1.2  1  CobT        Cobalamin biosynthesis protein CobT
        3.7    6.2   6.0        3.9    6.1   6.0    1.0  1  Presenilin  Presenilin


Domain annotation for each model (and alignments):
>> PC4  Transcriptional Coactivator p15 (PC4)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.3   0.1     4e-26   2.4e-22       2      50 ..      31      79 ..      30      81 .. 0.96

  Alignments for each domain:
  == domain 1  score: 78.3 bits;  conditional E-value: 4e-26
                CTTCCEEEEEEEETTEEEEEEEEEEECTTEEEEEEEEEEEEHHHHHHHH CS
         PC4  2 elskkrrvtvrefkGktlvdIReyyekdgelkPgkKGIsLtleqweaLk 50
                + s+k+rvt++ f+G+t+v IReyyekdge++PgkKGI+L++ +w ++k
  EPX71442.1 31 NDSGKKRVTLSDFRGTTYVHIREYYEKDGEMLPGKKGIALNPNEWMQFK 79
                6799*******************************************98 PP

>> CobT  Cobalamin biosynthesis protein CobT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8  10.9   9.3e-06     0.056     188     252 ..      76     138 ..      65     142 .] 0.58

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 9.3e-06
        CobT 188 kaFaravrqlLqdldlaeesaeepeeedeeeeedeeeeeeeseeeeeegedddkeeqeeaaseee 252
                  +F r+v ++ ++l l +e ++e+e++++++ e+  +ee+es+++  + e +++e ++e++++ +
  EPX71442.1  76 MQFKRMVGEVTDALGLVDEDEDEEEKKENADFETTRKEEQESTDT--KHEPKQEEGSKEENQSGS 138
                 689999999********7777777777777666666666655442..222222222222222111 PP

>> Presenilin  Presenilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   6.0   0.00066       3.9     270     313 ..      36     136 ..       2     142 .] 0.48

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.00066
  Presenilin 270 e.........................................................seeeseeesseaessaeesseekeseessesseeeeeeeee 311
                 +                                                         ++e++ee++++a+ ++++++e++++++++e ++ee ++ee+
  EPX71442.1  36 KrvtlsdfrgttyvhireyyekdgemlpgkkgialnpnewmqfkrmvgevtdalglvdEDEDEEEKKENADFETTRKEEQESTDTKHEPKQEEGSKEEN 134
                 022344456666667777777788888888888888888888888888888888887533333333333333333333333333332222222222222 PP

  Presenilin 312 ee 313
                 ++
  EPX71442.1 135 QS 136
                 22 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1711  (0.095432); expected 358.6 (0.02)
Passed bias filter:                      570  (0.0317921); expected 358.6 (0.02)
Passed Vit filter:                        90  (0.0050198); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 1053.65
//
Query:       EPX71443.1  [L=792]
Description: DUF1212 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-56  190.4   9.6    1.2e-53  182.0   0.6    2.3  2  ThrE      Putative threonine/serine exporter
    1.9e-10   41.0  24.6    2.6e-09   37.3  11.2    2.4  2  ThrE_2    Threonine/Serine exporter, ThrE


Domain annotation for each model (and alignments):
>> ThrE  Putative threonine/serine exporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  182.0   0.6   1.3e-57   1.2e-53       2     240 ..     354     597 ..     353     598 .. 0.95
   2 !   12.4   2.7   8.6e-06     0.077     114     198 ..     625     708 ..     613     717 .. 0.87

  Alignments for each domain:
  == domain 1  score: 182.0 bits;  conditional E-value: 1.3e-57
        ThrE   2 lilrlGeiLlesGaetyrvedtmkriaralgleevevfvtptsiivsvdeeeesittvrrv.rsrgvnleklsevnelsreiaageisleeaeerLdeI 99 
                 +il l+e L+ +G +++++ ++++ ++r l+l +++++++p ++ + ++ +e++ + +  +  +++++l+kl  vne++r ++++++s+e+    L++I
  EPX71443.1 354 FILCLCETLMLYGCPSHKILRNLRVASRILDL-RANFLYLPDCMLIYFR-NEKEHSDMHFIgITSQIDLNKLGLVNEIYRYVMRDKLSAEDGLDILRNI 450
                 8999****************************.***************5.6788889999999************************************ PP

        ThrE 100 erskpryprwlvvlaaglaaaafallf.ggdwidflvaflagllggllrlll.akrglnsfvleavaaflasllallavslglgln......pdaiiig 190
                 ++ +p y++wlv++++gla+a++ +++ gg+w d+++ fl+gll+g+lr +l +k++l++ ++e+++a++ s+++++++s++  ++      ++a++ g
  EPX71443.1 451 TTFRPLYRKWLVAIMHGLASACILPVAyGGGWYDMPLGFLLGLLLGILRVYLaPKSSLFDKLFEVFGAVVLSFIGRAFGSIS--KHgrpvfcFTALVEG 547
                 ***************************9************************99**************************83..223456557****** PP

        ThrE 191 sillLvPGlpltnavrDllsgdlvsGlaRlveailialaiafGivlalsl 240
                 ++ l++PG+++ ++v++l+s+++vsG +R+++a++++l++ fGi++++ l
  EPX71443.1 548 AVSLILPGYIIFCGVLELQSKNIVSGGVRMLYAVIFSLFLSFGITIGAVL 597
                 **********************************************9987 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 8.6e-06
        ThrE 114 aaglaaaafallfggdwidflvaflagllggllrlllakrglnsfvleavaaflasllallavslglglnpdaiiigsillLvPG 198
                 ++ l   ++ ++ +  +++ ++  l++++g++++++ + +  +  ++ a+++f+++ l+ +  ++ ++++   ++i +i +LvP 
  EPX71443.1 625 FIPLYTLSLLFVTQSHPKQWCMQILVSIIGYVVYFYSSLHFGTGQISSALGSFVIGSLGNFYSHF-IKSSSFVVVIPAIFVLVPS 708
                 55566666777778899999999************************************888886.68899*************5 PP

>> ThrE_2  Threonine/Serine exporter, ThrE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   5.4   0.00013       1.1      50     127 ..     513     595 ..     461     597 .. 0.82
   2 !   37.3  11.2   2.9e-13   2.6e-09       3     129 .]     624     771 ..     622     771 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00013
      ThrE_2  50 asflaalaigllsellArriktPvtvflipgll.....plvPGlaaYktvlslvqgnleeavengiealliagalavGlvlvs 127
                   +++a++++++++ ++ + k    vf + +l+      + PG  ++  vl+l ++n+      ++ a++  + l++G+++  
  EPX71443.1 513 FEVFGAVVLSFIGRAFGSISKHGRPVFCFTALVegavsLILPGYIIFCGVLELQSKNIVSGGVRMLYAVIFSLFLSFGITIGA 595
                 5679*****************98888877765533332456********************999****999999****99875 PP

  == domain 2  score: 37.3 bits;  conditional E-value: 2.9e-13
      ThrE_2   3 ilafiaalgfavifnvpkrallvagllGavgwlvylllmelgvsialasflaalaigllsellArriktPvtvflipgllplvP...........Glaa 90 
                 ++  + +l++ ++++ + ++  +  l+  +g++vy++ +       ++s+l++++ig l+++++  ik + +v++ip+++ lvP           G  +
  EPX71443.1 624 LFIPLYTLSLLFVTQSHPKQWCMQILVSIIGYVVYFYSSLHFGTGQISSALGSFVIGSLGNFYSHFIKSSSFVVVIPAIFVLVPsgftaqggvsgG--L 720
                 566777888888888889999999************998855566789************************************999998877532..3 PP

      ThrE_2  91 Yktvlslvqgn.............leeavengiealliagalavGlvlvsli 129
                 Y++  +++++n                 +e g++++ ia+++avG++++s+i
  EPX71443.1 721 YTA-TNIASHNtttntttysqsgsQYSSLEFGLTMVEIAIGIAVGFFASSII 771
                 322.2333222233456666666688899******************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (792 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       832  (0.0464053); expected 358.6 (0.02)
Passed bias filter:                      431  (0.0240393); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.30s 00:00:00.94 Elapsed: 00:00:00.45
# Mc/sec: 5341.43
//
Query:       EPX71444.1  [L=529]
Description: septin Spn5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-86  290.4   0.0    2.4e-86  289.5   0.0    1.4  1  Septin          Septin
    8.7e-05   22.6   0.0    0.00023   21.2   0.0    1.8  1  MMR_HSR1        50S ribosome-binding GTPase
    0.00025   20.7   0.6     0.0012   18.4   0.0    2.1  2  Ras             Ras family
     0.0016   18.6   0.2      0.026   14.7   0.0    2.5  2  Roc             Ras of Complex, Roc, domain of DAPkinase
     0.0037   16.2   8.5     0.0037   16.2   8.5    2.0  2  Apt1            Golgi-body localisation protein domain
  ------ inclusion threshold ------
      0.016   14.5   0.7      0.032   13.6   0.0    1.9  2  AIG1            AIG1 family
      0.068   13.1   0.0        1.5    8.7   0.0    2.5  2  RsgA_GTPase     RsgA GTPase
       0.11   11.6   1.6       0.27   10.3   1.6    1.6  1  Dopey_N         Dopey, N-terminal
        7.4    4.5  12.9         11    4.0  12.9    1.2  1  Sporozoite_P67  Sporozoite P67 surface antigen
        7.8    6.5  13.9        1.6    8.8   0.0    4.1  4  Dynamin_N       Dynamin family


Domain annotation for each model (and alignments):
>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  289.5   0.0   1.3e-89   2.4e-86       3     277 ..     182     438 ..     180     442 .. 0.94

  Alignments for each domain:
  == domain 1  score: 289.5 bits;  conditional E-value: 1.3e-89
                 EEEEEEEEEBTTSSCCCCCCTTSSSS------------------S-EEEEEEEEETTCEEEEEEEE---BSSSSSHHCCCHHHHHHHHHHHHHHHHHCT CS
      Septin   3 ieftlmvvGesglGkttlintlfetdlieeekleeasekkkktveikkkkvvieedgvklnltviDtpgfGdavdnskswepiveyideqfeeylrees 101
                 + ++l+vvGe +lGktt+i++++++ +  +          k+t e++++k+++ + ++ ++++++DtpgfG++ dns++w+pi+ +i ++++ey+++e+
  EPX71444.1 182 LPLNLIVVGEYSLGKTTFIKSFLQNMDAAR---------PKHTHEFTQYKAKLSDGEQLFHVNIVDTPGFGEKSDNSNCWRPIAANILQRLNEYFENET 271
                 579*******************99876554.........478999****************************************************** PP

                 SS--.SS-----EEEEEEEE-TTSSSS-HHHHHHHHHHTTTS-EEEEESSGGGS-HHHHHHHHHHHHHHHHHTT--------SSSS-SCCHHHHHHHHH CS
      Septin 102 klkR.kkivDkRvHaclyfisPtghglkpldvelmkklsekvnliPviaKaDtltkeElkefKkkireeleeeeikiyklpdeeededeeakelseklk 199
                 k +R    +D+R+Hacl+f++P+gh+l+pl+ +lmkk+++ vn+iP+i+KaDt+t +El +fK++i e++ +e+i  ++    ++d        ++klk
  EPX71444.1 272 KPQRnPYYNDNRMHACLFFLNPNGHRLQPLESYLMKKIDRFVNVIPIIGKADTMTPDELAKFKERIAEDMVSEKIYTFS---DYAD-------SEKKLK 360
                 ****8889*****************************************************************998888...2222.......3489** PP

                 HC-SEEB-SSSSEEEESSSEEEEEEETTEEEETT-TTT-SCCHHHHHHHHHCHHHHHHHHHHTHHHHHHHHHH-XXXX CS
      Septin 200 eslPfaivgsneliekkgkkvrgRkypWGvvevenekhsdFlkLrklllkthledLkevteellYetyRseklsklke 277
                 + lPfaivgsn++++k+gk++rgR+ypWG+ +++++++sdF++Lr++ll th e L+++t++l+Y+t+R+ek ++l e
  EPX71444.1 361 HPLPFAIVGSNQYLDKDGKSIRGRQYPWGTADIDDPEESDFCQLRNFLLYTHNEGLRNKTHRLIYDTFRQEKQATLDE 438
                 ***********************************************************************9887765 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   1.3e-07   0.00023       2      57 ..     186     251 ..     185     321 .. 0.63

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 1.3e-07
                 EEEEESTTSSHHHHHHHHHTS..TEEESSSTTSSSSEEEEEEEETT.EE...EEEEECGGC........S CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltge..kaivsdkpgtTrdinegrvklkg.ke...ielvDtpGl........i 57 
                  ++vG    GK+t+i++ +++  +    ++p  T + ++++ kl++ ++   +++vDtpG+         
  EPX71444.1 186 LIVVGEYSLGKTTFIKSFLQNmdA----ARPKHTHEFTQYKAKLSDgEQlfhVNIVDTPGFgeksdnsnC 251
                 579****************98433....5566666666666664332333339*******5333333330 PP

>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   6.8e-07    0.0012       2      57 ..     186     241 ..     185     250 .. 0.95
   2 ?   -0.4   0.2      0.42   7.5e+02      17      44 ..     421     448 ..     415     460 .. 0.74

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 6.8e-07
                 EEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETT CS
         Ras   2 lvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAG 57 
                 l++vG+ + GKt+++ +f ++    + ++T  + +y+++++  ++  +++i DT G
  EPX71444.1 186 LIVVGEYSLGKTTFIKSFLQNMDAARPKHTHEFTQYKAKLSDGEQLFHVNIVDTPG 241
                 79**************************************999***********98 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.42
                 HHHHHSSCSSSCTTTSSEEEEEEEEEET CS
         Ras  17 lrfvkdkFkeeyesTigvdfytkeievd 44 
                 +r + d+F++e+++T+ +++  k i+++
  EPX71444.1 421 HRLIYDTFRQEKQATLDEQSEFKYISTE 448
                 6788899999999999777666655544 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   1.5e-05     0.026       2      65 ..     186     241 ..     185     293 .. 0.80
   2 ?    0.8   0.4      0.31   5.5e+02      17      50 ..     421     453 ..     418     463 .. 0.72

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.5e-05
                 EEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-S CS
         Roc   2 vvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaG 65 
                 +++vG+ + GKt+++k+f+++    + k t+  + ++ +++  +g    +  + +++ni Dt G
  EPX71444.1 186 LIVVGEYSLGKTTFIKSFLQNMDAARPKHTHEFTQYKAKLS--DG----E--QLFHVNIVDTPG 241
                 799****************9999999889988777665542..22....2..346777777776 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.31
                 HCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTB CS
         Roc  17 krfvedkfsekekstigvdfltkevtkikgvend 50 
                 +r++ d+f++++++t+  +   k + ++++++++
  EPX71444.1 421 HRLIYDTFRQEKQATLDEQSEFKYI-STEEINKQ 453
                 799************9988877765.44554433 PP

>> Apt1  Golgi-body localisation protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   8.5   2.1e-06    0.0037     288     394 ..      25     160 ..      21     242 .. 0.53
   2 ?   -2.5   3.3      0.97   1.7e+03     111     161 ..     448     495 ..     413     518 .. 0.61

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 2.1e-06
        Apt1 288 gkklfeYiFPkrdsdaqea...........s.....mvkess.........seeddesdeesessssss......ssssssassssssssrssslelrl 355
                  +++++ +FP+++++ + +           +     +  +++         +e+++e+++e+e++++ +       ++++++  +++++          
  EPX71444.1  25 DEQMMSSLFPDKEQEIETDhfgpsiaiselTdapveK--MQDlsldpdghqDENENETEDEIENENDNEndnendMDETEQEGGKQDNEP--------- 112
                 57999*****999887777899988876651454221..333444454433222222222222222222222222222222222222222......... PP

        Apt1 356 kpt...........sstssssssessssssskkrsseesslessaservk 394
                   +           + +++s+s++ s+s s+ k+s++++sl++ ++  v 
  EPX71444.1 113 --SenevkgrasedQDSKKSESEAPSRSGSQMKKSKSTKSLRKDSNILVP 160
                 ..223334444555555566666666666666777777788877776663 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.97
        Apt1 111 eeikehfqieskyldkegwedrlklekelaeceeeLfllmkaittsqlrkk 161
                 eei++++ ++++ l ++ +   + l+++  e e++L l+ k ++t + +++
  EPX71444.1 448 EEINKQYVQKQSQLVEDAL--TKGLKSQFKEKENNLELMEKHLRTHH-KDY 495
                 4454555444444444443..55666666666677777777766655.333 PP

>> AIG1  AIG1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.8e-05     0.032       1      65 [.     184     248 ..     184     265 .. 0.83
   2 ?   -3.5   1.0       2.9   5.3e+03     149     174 ..     436     461 ..     407     497 .. 0.49

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.8e-05
                 EEEEEESSTTSSHHHHHHHHHTS--SS--TTTS---SS-EEEEEEETTEEEEEEE--SCCCTTCC CS
        AIG1   1 ltivlvGktgnGkSaTgNsilgkkaFesklsaqsvtkkcqkksrtwdgkkinViDTPglfdlsvs 65 
                 l++++vG    Gk + + s l++       ++++ t+   k s  ++ +++n++DTPg  + s++
  EPX71444.1 184 LNLIVVGEYSLGKTTFIKSFLQNMDAARPKHTHEFTQYKAKLSDGEQLFHVNIVDTPGFGEKSDN 248
                 589******************998877777889999999999999999**********9776654 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 2.9
                 HHHHTTTSEEEEETTHHHHHHHHHHH CS
        AIG1 149 vlkecgnRvvlfnnktaskeekeeQv 174
                 + ++ + +++  +  ++++ +k++Q+
  EPX71444.1 436 LDEQSEFKYISTEEINKQYVQKQSQL 461
                 44444445555555544555555443 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.0   0.00084       1.5     103     163 ..     187     244 ..     167     247 .. 0.82
   2 ?    1.3   0.0      0.16   2.8e+02      31      73 ..     297     338 ..     285     363 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00084
                  EEECSTTSSHHHHHHHHCTT---.--S--------------SEEEEEETTTEEEESS-SSSS CS
  RsgA_GTPase 103 vlvGqSGvGKStLinallpelel.ktgevseklgrGkhTTtavellelaegglliDtPGfre 163
                  ++vG+   GK+t+i+++l+++++ + +++ e ++     +   +l++++    ++DtPGf e
   EPX71444.1 187 IVVGEYSLGKTTFIKSFLQNMDAaRPKHTHEFTQYKAKLSDGEQLFHVN----IVDTPGFGE 244
                  7899999********9999775515566666677777788899999999....*******76 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.16
                  -HHHHHHHHHHHHHTT-EEEEEEE-GGG--HHHHHHHHHHHHH CS
  RsgA_GTPase  31 slnlldrfLvlaeekgiepvivlnKiDlleeeeeleelkeele 73 
                  +l+ l+ +L+   ++ ++++ ++ K+D ++ +e l ++ke+++
   EPX71444.1 297 RLQPLESYLMKKIDRFVNVIPIIGKADTMTPDE-LAKFKERIA 338
                  56778999999999999***************9.777777654 PP

>> Dopey_N  Dopey, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   1.6   0.00015      0.27     178     275 ..     407     502 ..     394     517 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00015
     Dopey_N 178 wlaiirspsrRlgalkylskklpklkeveeeeekkeklsklseeaeallspepgllvrallatledenllvqRgiLDlLlshlpldsdvlqeklsked 275
                 +l+   ++  R  +  ++   + + k+ + +e+++ k+++++e +++ ++++++l+  al ++l+ ++   + + L+l+ +hl+ + + +++ l+ + 
  EPX71444.1 407 FLLYTHNEGLRNKTHRLIYDTFRQEKQATLDEQSEFKYISTEEINKQYVQKQSQLVEDALTKGLK-SQFKEKENNLELMEKHLRTHHKDYKHVLQ-KR 502
                 67777888889999999999997777777777777788899999********************9.7888999*************877776333.32 PP

>> Sporozoite_P67  Sporozoite P67 surface antigen
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0  12.9    0.0059        11      86     177 ..      52     144 ..       6     165 .. 0.70

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.0059
  Sporozoite_P67  86 trsfqepvsqeselqsdteineddkGskedseedddeeeeednkstsskdgkgskka..qpgvssssgsttsqtdlstklsqtgl.gasGshaqq 177
                     ++  + pv++  +l  d + ++d++ +++++e+++++++e+dn+      +++  k   +p+ +    +  +++d+ +k+s+++  + sGs  ++
      EPX71444.1  52 SELTDAPVEKMQDLSLDPDGHQDENENETEDEIENENDNENDNENDMDETEQEGGKQdnEPSENE--VKGRASEDQDSKKSESEApSRSGSQMKK 144
                     33346679999999999999999999***999999999999999988777776666522565444..4444445555556655541578887544 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   2.0      0.38   6.8e+02      47      77 ..      80     110 ..      49     162 .. 0.60
   2 ?    8.8   0.0   0.00087       1.6       2      20 ..     187     205 ..     186     230 .. 0.87
   3 ?    3.5   0.0     0.038        69     102     118 ..     233     249 ..     227     272 .. 0.79
   4 ?   -1.8   1.1       1.6   2.8e+03      71      81 ..     458     468 ..     418     521 .. 0.50

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.38
                 CCS...SSEEEET-EB--CHHHHHHHHHHHH CS
   Dynamin_N  47 seravkeelkekekkledfsevreeiekete 77 
                 +e++ ++e+ +++++++d++e ++e  k+ +
  EPX71444.1  80 TEDEIENENDNENDNENDMDETEQEGGKQDN 110
                 1111222222224444444444444444433 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00087
                 EEEEBTTTTHHHHHHHHHT CS
   Dynamin_N   2 avvGsqSsGKSSvlnaLlg 20 
                 +vvG++S GK++++ + l+
  EPX71444.1 187 IVVGEYSLGKTTFIKSFLQ 205
                 8**************9987 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.038
                 SEEEEE---B-SSSGTT CS
   Dynamin_N 102 gltlvDlPGldsvnkrd 118
                 ++++vD+PG+ +  ++ 
  EPX71444.1 233 HVNIVDTPGFGEKSDNS 249
                 689******98876665 PP

  == domain 4  score: -1.8 bits;  conditional E-value: 1.6
                 HHHHHHHHHHT CS
   Dynamin_N  71 eieketekiag 81 
                 + +  ++ +++
  EPX71444.1 458 QSQLVEDALTK 468
                 22222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (529 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2373  (0.132355); expected 358.6 (0.02)
Passed bias filter:                      679  (0.0378716); expected 358.6 (0.02)
Passed Vit filter:                       114  (0.00635841); expected 17.9 (0.001)
Passed Fwd filter:                        25  (0.00139439); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.84u 0.33s 00:00:01.17 Elapsed: 00:00:00.51
# Mc/sec: 3139.74
//
Query:       EPX71445.1  [L=326]
Description: ubiquitin-specific protease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0022   18.5   0.0     0.0038   17.7   0.0    1.4  1  OTU       OTU-like cysteine protease


Domain annotation for each model (and alignments):
>> OTU  OTU-like cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   2.1e-07    0.0038       4      89 ..     141     226 ..     138     252 .. 0.77

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 2.1e-07
                 S-HHHHHHHHCCCSS.SHCCHHHHHHHHHCHHHHHHTSSHHCCHHHHCCHHH.HHHHTTSTTHHHHHHHHHHHHHHCTS-EEE.......ETTS CS
         OTU   4 GnCLlravsqqlwgvsdelrkakvseLreklaeylrehseelelfleeeeeg.ylkeiektaawggeleifalahiLrrpIiV.......lkse 89 
                   CL+ra s+ l        +     Lre +a+ + ++ e ++  + +++   y   i+k++ wgg++e+ +l++ ++  I         + s+
  EPX71445.1 141 NSCLFRALSKPLG----FSPY----DLREVVASTILSNPELYSTAVLGKAPIeYAAWIRKESSWGGYIELSVLSSHFDLEICSvdvqtgrVDSY 226
                 5799999999994....2345....9****************99999997668*************************9997524344444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (326 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       524  (0.0292264); expected 358.6 (0.02)
Passed bias filter:                      471  (0.0262703); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2357.06
//
Query:       EPX71446.1  [L=88]
Description: ribosomal protein subunit Mrp10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-06   27.6   1.5    3.1e-06   27.2   1.5    1.2  1  CHCH      CHCH domain
     0.0062   16.5   0.7     0.0076   16.2   0.7    1.2  1  Cmc1      Cytochrome c oxidase biogenesis protein Cmc1 like
  ------ inclusion threshold ------
      0.014   15.4   1.9       0.02   14.9   1.9    1.2  1  CX9C      CHCH-CHCH-like Cx9C, IMS import disulfide relay-sys
      0.091   13.2   0.4       0.13   12.7   0.4    1.2  1  GCK       GCK domain


Domain annotation for each model (and alignments):
>> CHCH  CHCH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.2   1.5   6.9e-10   3.1e-06       1      34 [.      30      65 ..      30      66 .. 0.96

  Alignments for each domain:
  == domain 1  score: 27.2 bits;  conditional E-value: 6.9e-10
                THHHHHHHHHHHHHCTSS..TTTTHHHHHHHHHHHC CS
        CHCH  1 CgeefkeylkClkdnsde..fskCrkefeafkeCvk 34
                C +e+ ++l+C+++n+ +  + +C k    +++C+k
  EPX71446.1 30 CSQEMAALLGCWQNNGGNtnSTQCLKVAASLENCMK 65
                *****************778**************98 PP

>> Cmc1  Cytochrome c oxidase biogenesis protein Cmc1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.7   1.7e-06    0.0076       7      54 ..      23      72 ..      17      81 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.7e-06
        Cmc1  7 kkar.keCaelikalaeChkd.rllkvvgkCneekeamkkClkeyrtder 54
                k+++   C+++++al  C ++  + +   +C +    + +C+k +  +++
  EPX71446.1 23 KERQaIPCSQEMAALLGCWQNnGGNTNSTQCLKVAASLENCMKSQHGKQK 72
                4444478**************667777789************98765544 PP

>> CX9C  CHCH-CHCH-like Cx9C, IMS import disulfide relay-system,
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   1.9   4.5e-06      0.02       7      43 ..      29      67 ..      24      67 .. 0.91

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 4.5e-06
        CX9C  7 yCpkefeaYhkCvssn.qs.wpekCkeqkkeLakCikss 43
                 C +e+ a   C ++n  + + ++C +   +L +C+ks+
  EPX71446.1 29 PCSQEMAALLGCWQNNgGNtNSTQCLKVAASLENCMKSQ 67
                7***************955599**************986 PP

>> GCK  GCK domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.4   2.9e-05      0.13      13      52 ..      29      66 ..      26      70 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 2.9e-05
         GCK 13 gCkesfiawekcveeaeknkedlvekcaevtatlkkCmea 52
                +C  ++ a+  c ++    ++   ++c+ v a+l++Cm+ 
  EPX71446.1 29 PCSQEMAALLGCWQNNG--GNTNSTQCLKVAASLENCMKS 66
                58999999999998777..456789*************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       590  (0.0329076); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.36u 0.28s 00:00:00.64 Elapsed: 00:00:00.43
# Mc/sec: 620.53
//
Query:       EPX71447.1  [L=464]
Description: glycine hydroxymethyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   9.8e-206  683.0   0.0   1.1e-205  682.8   0.0    1.0  1  SHMT             Serine hydroxymethyltransferase
    9.6e-05   21.8   0.0    0.00015   21.2   0.0    1.3  1  Beta_elim_lyase  Beta-eliminating lyase


Domain annotation for each model (and alignments):
>> SHMT  Serine hydroxymethyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  682.8   0.0  1.3e-209  1.1e-205       1     399 []      11     409 ..      11     409 .. 1.00

  Alignments for each domain:
  == domain 1  score: 682.8 bits;  conditional E-value: 1.3e-209
                 HHHHTHHHHHHHHHHHHHHHHSEE-STT-----HHHHHHHTSGGGG----EETTEESSST-HHHHHHHHHHHHHHHHHCT-STTTEEEE---SSHHHHH CS
        SHMT   1 leesdpevaeiikkekerqkeeieliasenftskavlealGsvltnkyaeGyPGkryyGGcefvdeveelaqdrakelfkldpakwgvnvqplsGsqan 99 
                 l+e+dp vaei+k+e  rq+++i liasenfts+av++alGsv++nky+eGyPG+ryyGG++++d++e+l+q+ra+ +f+ld +kwgvnvq+lsGs+an
  EPX71447.1  11 LKEQDPTVAEIMKNEAGRQRSSIVLIASENFTSRAVMDALGSVMSNKYSEGYPGHRYYGGNKYIDQIETLCQERALAAFNLDSSKWGVNVQCLSGSPAN 109
                 6899*********************************************************************************************** PP

                 HHHHHHHT-TT-EEEEESCTTTSTGGGT-BTSS-B-SHHHHHSEEEEE-B-TTTSSB-HHHHHHHHHHH--SEEEEE-SST-S---HHHHHHHHHHTT- CS
        SHMT 100 lavytallepgdrilgldladGGhlthGakveskkisassklfesveykvdketglidydelekkakefkPklivaGtsaysrlidyarlreiadevga 198
                 l+vy+a++ p++r++gldl+ GGhl+hG+++++kkisa+s++fe+++y+vd++tg+idyd+lek+a++++Pk++vaGtsay+rlidy+r+reiad+v+a
  EPX71447.1 110 LQVYQAIMPPHGRLMGLDLPSGGHLSHGYQTDTKKISAVSTYFETMPYRVDPSTGIIDYDTLEKNAQLYRPKILVAGTSAYCRLIDYKRMREIADSVNA 208
                 *************************************************************************************************** PP

                 EEEEE-GGGHHHHHTTSS--GCCTSSEEEEESSSTT-S-S-EEEEEC-SEEEEETTTEEEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHCTSHH CS
        SHMT 199 yllvdmahiaGlvaagvipsPfeyadvvtttthktlrGprgglillrkgvksvdktgkevleelekkinsavfPglqGGPlnhviaakavalkealepe 297
                 yl+vdmahi+Gl++agvipsPfeyadvvtttthk+lrGprg++i++r+g+++ dk+g+ v ++le+kin++vfPg+qGGP+nh+i+a+avalk+ l+pe
  EPX71447.1 209 YLVVDMAHISGLISAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRRGLRNHDKKGNPVYYDLEEKINFSVFPGHQGGPHNHTITALAVALKQCLTPE 307
                 *************************************************************************************************** PP

                 HHHHHHHHHHHHHHHHHHHHHTT-EEGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTSSTTTT-SEEEEESHHHHHTT--HHHHHHHH CS
        SHMT 298 fkvyqkqvlknakalaealkekgyklvsgGtdnhlvlvdlrekgldGkraekvlekvnitankntvPgdksalvtsGlrlGtpaltsrgfkeedlekva 396
                 +k+yq qv+knak+ +e++ ++gykl ++Gtd+h+vlvd+++kg+dG+rae++le +ni++nknt+P dksal +sG+r+Gtpa+t+rgfke+d+ +v+
  EPX71447.1 308 YKQYQAQVVKNAKVCEEEFRKRGYKLAADGTDSHMVLVDVKSKGIDGARAERILELINIATNKNTLPSDKSALSPSGIRIGTPAMTTRGFKEQDFVRVV 406
                 *************************************************************************************************** PP

                 HHH CS
        SHMT 397 kfi 399
                 ++i
  EPX71447.1 407 EYI 409
                 997 PP

>> Beta_elim_lyase  Beta-eliminating lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   1.6e-08   0.00015      14     242 ..      54     370 ..      46     449 .. 0.73

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 1.6e-08
                      HHHHHHCS----CCCT--HHHHHHHHHHHH.......HTT-SEEEE.........ES-HHHHHHHHHHHH--TTEEEEEETT.......-HHHH CS
  Beta_elim_lyase  14 msdaqaaamlGdesYgedktvnrLedavae.......lfgkeaalf.........vpqGtaAnsillkillqrgeevivtep.......ahihf 84 
                      ms++ ++   G+  Yg++k + ++e  ++e       l                 + +G  An   +++++ + ++ +++ +       +h++ 
       EPX71447.1  54 MSNKYSEGYPGHRYYGGNKYIDQIETLCQEralaafnL-------DsskwgvnvqCLSGSPANLQVYQAIM-PPHGRLMGLDlpsgghlSHGYQ 139
                      777778888899*******9999999998844443331.......245556666699*************9.66777777777899999***** PP

                      SSTTHHHHCC--...EEEEE-EBTTTBE-HHHHHHHS--S-TTS-EEEEEEEESSBTTTTTB---HHHHHHHHHHHHHCT-EEEEEETTHHHHH CS
  Beta_elim_lyase  85 detgaiaelagv...klrdlknkeaGkmdlekleaaikevgaheekiklisltvTnntagGqvvsleelrevaaiakkygiplhlDgARfanaa 175
                      + t+ i++++     ++  ++ +  G +d + le+  +    +++k   i+++ T  +       l   +++++ia++ +  l++D A +    
       EPX71447.1 140 TDTKKISAVSTYfetMPYRVDPST-GIIDYDTLEKNAQL---YRPK---ILVAGTSAY-----CRLIDYKRMREIADSVNAYLVVDMAHISG-L 220
                      999988877654000455555555.**********9888...5554...677777776.....4556666667778888999******9876.5 PP

                      HHHTS-CHHHHTTSSEEEEESSSTT--SS-EEEEE-HH.....................................................HHH CS
  Beta_elim_lyase 176 kslgeivkemfsyvDsvtmslkKdllanvGgvlafrddel.................................................edyla 220
                       s g+i++  f+y+D+vt    K l  + G++++fr+                                                    ++y a
       EPX71447.1 221 ISAGVIPS-PFEYADVVTTTTHKSLRGPRGAMIFFRRGLRnhdkkgnpvyydleekinfsvfpghqggphnhtitalavalkqcltpeyKQYQA 313
                      59999986.69**************************976999999999999999999999999999999999999999999999999988888 PP

                      HHHHHHHHHT---SSTHHHHH.................................... CS
  Beta_elim_lyase 221 erveqrkylggglrqagvlaa...................................l 242
                      + v+ +k   +++r+ g + a                                   +
       EPX71447.1 314 QVVKNAKVCEEEFRKRGYKLAadgtdshmvlvdvkskgidgaraerileliniatnK 370
                      888888888888888887777555555555555555555555555444444444440 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (464 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       512  (0.0285571); expected 358.6 (0.02)
Passed bias filter:                      473  (0.0263818); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.28s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 3243.13
//
Query:       EPX71448.1  [L=773]
Description: eIF4 binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      4e-31  108.3   3.0    8.3e-31  107.3   3.0    1.6  1  MIF4G     MIF4G domain
    7.1e-26   90.4   0.0    2.5e-25   88.7   0.0    2.0  1  MA3       MA3 domain


Domain annotation for each model (and alignments):
>> MIF4G  MIF4G domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.3   3.0   9.3e-35   8.3e-31       2     212 .]     258     458 ..     257     458 .. 0.97

  Alignments for each domain:
  == domain 1  score: 107.3 bits;  conditional E-value: 9.3e-35
                 HHHHHHHHCHTTTTHHHHHHHHHHHHHCS.CHHHHHHHHHHHHHHHHHCG....GGHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHC-S-HHHHH CS
       MIF4G   2 kkvkgilnklskenfevlikqllklamdd.dknelkevielifekaveep....sfsplyarlcgklnsrfqqnFrikllnklqeefekryelenelee 95 
                 ++++g+ln+ls  n+ ++++++  ++m++ + +  +++++li ++++ +     + +  ya l  +l+ ++  +F+++ll+ l+ ef +   l +++e 
  EPX71448.1 258 RRLQGLLNRLSGANVGSIVSEIEAIYMENsRHSVTDTLTKLILQIVMAREsmldQLVIVYAALSTALYRIIGPEFGAYLLQSLVDEFLR---LYKSKET 353
                 799**************************9779999999999999998887789999999999999999999*****************...99***** PP

                 HHHHHHHHHHHHHHHHHHHHHTTSSEHHHHHHHHHHHHHGGCCCCSCCHSCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHCSSS CS
       MIF4G  96 nedgnrrrrlglvrflgelfklkmltskilldclkellssltketaddppqdleeieilltllttigktlennekakkeldqffkriqkiledatrqel 194
                 +  ++++++++l+ f+ el++++++++  ++d ++ +l+slt+           ++e+ll++++++g +l+   +++++l+ ++++++  l+ a+ +++
  EPX71448.1 354 EPLSSHKETSNLIVFFVELYNFQLVSCVLVYDFVRMFLKSLTE----------LNVELLLKIVRNCGNQLR--SDDPSALQDIVQEMHLLLSTADPASI 440
                 *******************************************..........******************..************************** PP

                 SHHHHHHHHHHHHHHHTT CS
       MIF4G 195 ssrirfmlkdlielkknk 212
                 s r++fm++++  l++nk
  EPX71448.1 441 SVRTKFMVESITSLRENK 458
                 ****************97 PP

>> MA3  MA3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.7   0.0   2.7e-29   2.5e-25       2     112 ..     565     677 ..     564     678 .. 0.93

  Alignments for each domain:
  == domain 1  score: 88.7 bits;  conditional E-value: 2.7e-29
                 HHHHHHHHHSSS...SHHHHHHHHHHTT--.TTHHHHHHHHHHHHHHS.SS--HHHHHHHHHHHCC-HHHHHHHHHHHHHHHHGGGGS-HH.......H CS
         MA3   2 rrkifliieeylssgdyeeavsklekLklp.kqeheivkillecaleesktyneyygllleklceknlilkkqfekgfwdvlesledleld....ipea 95 
                 r++if+ ++ ++   dy +a+ +++kL l+  q++ei++++l+ca  e k yn++y+l++ k+c+++++lkk+f++++wd++++l++ +      +p +
  EPX71448.1 565 RTSIFVALMGAE---DYIDAWDRILKLRLKkVQQPEIAYVILHCASSE-KMYNPFYALVALKCCTRQHNLKKSFQFSLWDFFNDLQPEDDGdaneVPTR 659
                 899*********...*********************************.************************************98665578998866 PP

                 .HHHHHHHHHHHHHTTSS CS
         MA3  96 .irnlaefvarlisediL 112
                  + nla+f+a l++e+++
  EPX71448.1 660 kVFNLAKFYAYLVIEGGQ 677
                 156***********9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (773 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1615  (0.0900775); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.72u 0.31s 00:00:01.03 Elapsed: 00:00:00.47
# Mc/sec: 4905.24
//
Query:       EPX71449.1  [L=264]
Description: ribosomal protein subunit S2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.3e-64  217.4   0.4    2.2e-62  210.1   0.4    2.1  1  Ribosomal_S2  Ribosomal protein S2
  ------ inclusion threshold ------
       0.08   12.5   0.0       0.18   11.4   0.0    1.5  1  LDcluster4    SLOG cluster4 family


Domain annotation for each model (and alignments):
>> Ribosomal_S2  Ribosomal protein S2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  210.1   0.4   2.5e-66   2.2e-62       1     213 [.      53     244 ..      53     246 .. 0.91

  Alignments for each domain:
  == domain 1  score: 210.1 bits;  conditional E-value: 2.5e-66
  Ribosomal_S2   1 LLeagvhfGhqtrrwnpkmkpyIygerngihiidlektlaalrraykvvkevaakggkilfvgtkkqakeavkeaakrangyyvnerWlgGtLTNfk 97 
                   LL++ +h+Gh+t++wnp ++p+Iyg+r+gihii+l++t+ +lrra++vv+eva+ +g ++f+gt++++k+ v +aakra+g++v++rWl+G++TN++
    EPX71449.1  53 LLSSYAHMGHSTSLWNPLTQPFIYGKRDGIHIISLDQTMVYLRRAISVVREVAKAKGVVVFIGTRNGQKDSVVNAAKRARGFHVFDRWLPGLITNAR 149
                   899********************************************************************************************** PP

  Ribosomal_S2  98 tikksikklkeleeleedgeldltkkealklkkekekleknlggikkmkklPdlvvvldpkkekiavkEakklgipviaivDtnvdpdlvdypIpaN 194
                   +++ ++    ++ + +++g++          ++e+ k             +Pdl+v+l+p +++ a  Ea+k+ ip+i+i+D+++dp++v+ypIpaN
    EPX71449.1 150 NVQGNLGG--KIVAVDDNGRV--------VPTEESPK-----------FVIPDLMVILNPLENRGACLEAQKASIPTIGIIDSDADPKMVTYPIPAN 225
                   *****655..33333222333........33333344...........689********************************************** PP

  Ribosomal_S2 195 ddsirsiklilgvladaie 213
                   dds+r+++li+g+l++a+e
    EPX71449.1 226 DDSLRCTDLIVGLLSKAAE 244
                   ****************986 PP

>> LDcluster4  SLOG cluster4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0     2e-05      0.18      19      60 ..      94     136 ..      84     137 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 2e-05
  LDcluster4  19 lelaeelGrliAke.gavlltGgrtGvmeaaskGakeagGltv 60 
                 l++a  + r++Ak+ g+v++ G r+G  + + ++ak+a+G+ v
  EPX71449.1  94 LRRAISVVREVAKAkGVVVFIGTRNGQKDSVVNAAKRARGFHV 136
                 5678899999*99626677789999***************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       455  (0.0253779); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 1859.43
//
Query:       EPX71450.1  [L=470]
Description: threonine-tRNA ligase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      4e-35  121.4   0.0    6.4e-35  120.7   0.0    1.3  1  tRNA-synt_2b    tRNA synthetase class II core domain (G, H, P
    1.9e-19   69.6   0.2    3.2e-19   68.9   0.2    1.4  1  HGTP_anticodon  Anticodon binding domain
  ------ inclusion threshold ------
       0.17   11.8   1.2         39    4.2   0.1    3.5  4  YppF            YppF-like protein


Domain annotation for each model (and alignments):
>> tRNA-synt_2b  tRNA synthetase class II core domain (G, H, P, S and T)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.7   0.0   1.1e-38   6.4e-35       4     178 ..     131     346 ..     120     347 .. 0.89

  Alignments for each domain:
  == domain 1  score: 120.7 bits;  conditional E-value: 1.1e-38
                   EETTSEEEEE-SSSHHHHHHHHHHHEEEBGG.SSEEEEEEEEEEBTTTS.TBCTTTB-SEEEEEEEEEEESGGGHHHHHHHHHHHHHHHHHHTT.SC CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2b   4 edrndreyiLkPtneetfvelirdevlrskr.LPlklyqiqtkyRdEks.dsrGLlRvreFhqkdgyvfhaeaslddslrdlikaisriferlglef 98 
                   e++++  y LkP+n+++++ +++    rs+r LPl+++++++++R+E+s +++GL+R+r Fhq+dg++f+ +++++ ++ + ++ i+++++ lg+ +
    EPX71450.1 131 EEEKNAVYGLKPMNCPGHCLIYSHT-ERSYRdLPLRFADFSPLHRNEASgALSGLTRLRCFHQDDGHIFCEPQQIKTEITKTLQFIKHVYSLLGMTK 226
                   4556688***************966.9**777*****************99********************************************99 PP

                   EEEEEEGTTSC.................................BTTSEEEEEEEEETTTSEEEEEEEEEEEETHHHHHTTE........EEECTTS CS
                   xxxxxxxxxxx.................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........xxxxxxx RF
  tRNA-synt_2b  99 raiielmsaks.................................adykdkkefeavsesltkgieigtiqklgtrlserlga........tvldenn 154
                    +  ++++ ++                                 a+y++k ++++ +   +k ++++tiq + ++l+er+++        +    ++
    EPX71450.1 227 MKYFLSTRPEDsigsletwnlsenalkealnvnevpwvlnegdgAFYGPKIDINVADA-RGKWHQTATIQLD-FHLPERFKLyyrtkaggS-STVEE 320
                   98888877665778899*****************************************.9************.*********553322210.12234 PP

                   SEEEEEEEEEE.EE.HHHHHHHHHHH CS
                   xxxxxxxxxxx.xx.xxxxxxxxxxx RF
  tRNA-synt_2b 155 reksvimicaa.ig.veRllsaileq 178
                   +e  ++++++a +g +eR++++++e+
    EPX71450.1 321 NESMPVLVHRAvFGsLERFMGILIEH 346
                   566799*****************997 PP

>> HGTP_anticodon  Anticodon binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.9   0.2   5.4e-23   3.2e-19       1      93 [.     359     464 ..     359     465 .. 0.95

  Alignments for each domain:
  == domain 1  score: 68.9 bits;  conditional E-value: 5.4e-23
                     SEEEEESSSSHHHHHHHHHHHHHHHHTTT.............SEEEEESSSSTHHHHHHHHHHTT-SEEEEE-HHHHHHTEEEEEETTTC.EEEE CS
  HGTP_anticodon   1 qvvviplnekaeeleeyakklaeeLraag.............irvelddsnesigkkireadllgipfavvvGekelekgtvtvrdrdtr.eqer 81 
                     ++v++p+n+ ++ ++++akk+++eL+  +             ++v+l  +++s+gk++re++ll++++ +vvGeke+++++++v dr++r  ++r
      EPX71450.1 359 HAVILPVNQ-SQHVLDFAKKIQNELSGSNqvqsyfaplnqtyFYVDLQADAQSLGKRLRESRLLNYNYEIVVGEKEVQEQVLSVTDRQNRkPTQR 452
                     689******.7779*************************************************************************9996789* PP

                     EETTHHHHHHHH CS
  HGTP_anticodon  82 vsldelveklke 93 
                     ++++el + +++
      EPX71450.1 453 MTINELRNTFEQ 464
                     ******998865 PP

>> YppF  YppF-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.1     0.093   5.6e+02      21      32 ..      75      86 ..      72      95 .. 0.86
   2 ?   -3.8   0.0       2.1   1.3e+04      23      32 ..     210     219 ..     202     223 .. 0.80
   3 ?    3.1   0.0     0.015        87      21      38 ..     368     383 ..     365     390 .. 0.82
   4 ?    4.2   0.1    0.0065        39       1      13 [.     453     465 ..     453     470 .] 0.87

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.093
        YppF 21 aneLLDFarklY 32
                 n L DF + +Y
  EPX71450.1 75 YNRLVDFLKLQY 86
                69*******999 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 2.1
        YppF  23 eLLDFarklY 32 
                 + L F +++Y
  EPX71450.1 210 KTLQFIKHVY 219
                 5688999998 PP

  == domain 3  score: 3.1 bits;  conditional E-value: 0.015
        YppF  21 aneLLDFarklYlqgeis 38 
                 + + LDFa+k  +q+e+s
  EPX71450.1 368 SQHVLDFAKK--IQNELS 383
                 6799*****9..788876 PP

  == domain 4  score: 4.2 bits;  conditional E-value: 0.0065
        YppF   1 MnvneLkkkFiav 13 
                 M++neL+++F+++
  EPX71450.1 453 MTINELRNTFEQK 465
                 9*********985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (470 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       582  (0.0324614); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.23s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 3229.47
//
Query:       EPX71451.1  [L=589]
Description: vacuolar carboxypeptidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.7e-31  107.2   0.0    1.2e-30  106.7   0.0    1.2  1  Peptidase_M20  Peptidase family M20/M25/M40
    5.8e-09   35.8   0.0    1.4e-08   34.6   0.0    1.6  1  M20_dimer      Peptidase dimerisation domain
  ------ inclusion threshold ------
      0.031   14.0   0.0      0.056   13.1   0.0    1.4  1  Peptidase_M28  Peptidase family M28


Domain annotation for each model (and alignments):
>> Peptidase_M20  Peptidase family M20/M25/M40
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.7   0.0   2.1e-34   1.2e-30       1     206 [.     190     586 ..     190     587 .. 0.88

  Alignments for each domain:
  == domain 1  score: 106.7 bits;  conditional E-value: 2.1e-34
                    EEEEES-BSS.TTCG.GGSSS.TTSEEETTTEEESTTTTTTHHHHHHHHHHHHHHHHHTTT-SSEEEEEEESTTSSTT.THHHHHHHHHHTTTCES CS
                    xxxxxxxxxx.xxxx.xxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxx RF
  Peptidase_M20   1 llgsHlDvVp.eeet.dgwtt.pfslteedGklyGrGaddmkggvlaalealralkdegikpkgtivllfqpdEEggr.gGakallegleerekvd 92 
                    +l++H+DvVp +e t d+w + pfs+t +dG +yGrGa+d+k+++++++eal+ l+ + ++p++t+   + +dEE+++  +a  l++ l e ++ d
     EPX71451.1 190 VLMAHQDVVPiAEATlDKWYFpPFSATYKDGIVYGRGATDDKNSLVGIFEALELLASSDFTPERTVIASIGFDEEISGyHSALPLAKRLYEIYGQD 285
                    599********99999***********************************************************988899999999777778888 PP

                    EEEEEEEESSSBTCHSTETEEEE......................................................................... CS
                    xxxxxxxxxxxxxxxxxxxxxxx......................................................................... RF
  Peptidase_M20  93 avfelhieepgileagklaigvv......................................................................... 115
                    +v  ++ e++ ++e  +     +                                                                         
     EPX71451.1 286 GVELILDEGGFVSEYYG----TYfaavsvaekgyidvvlrlktpgghssippshtnigimsklipqvevpfegklvpenpffsslecfakyskgld 377
                    84434444445555333....2244556789999999999******************************************************** PP

                    ................................................................................................ CS
                    ................................................................................................ RF
  Peptidase_M20 116 ................................................................................................ 115
                                                                                                                    
     EPX71451.1 378 ehlrslilkkdtesltsilskskdtryffetsiavdvirggvkvnalpeetvvnvnhrisveknlqqlydhyeqlvgrfaeenhlnlthfngtqiv 473
                    ************************************************************************************************ PP

                    .......EEEEEEEEEESHEEEC....CHHHHHHHHHHHHHHHTSCEEEE.EES..SSBHTHHHHTTT.EEE.EE..EESS..G....GCTTSTTT CS
                    .......xxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxx.xxx..xxxxxxxxxxxx.xxx.xx..xxxx..x....xxxxxxxx RF
  Peptidase_M20 116 .......kvevelleggapvtln....dsplvkalaeaaeelfgekveli.vsg..pggtdarffagi.ptv.mi..fgpg..s....glaHspnE 187
                           +++++ +   +p +++     +  +++l  a++ +fg +  +  +++  +++td+r+++++ +++  +  + p   s     +aH++nE
     EPX71451.1 474 sypdavgDFSLSTIKTLEPSPVSpygqGASTYEKLGGAIKHTFGND--TLiAPAlmTANTDTRHYWNLtKSIyRWtpVSPKavSqtddFNAHTVNE 567
                    ******8688887777777777778877888************944..441344688********999544423366334433245679******* PP

                    EEEHHHHHHHHHHHHHHHH CS
                    xxxxxxxxxxxxxxxxxxx RF
  Peptidase_M20 188 yvdledlekgikvlarlle 206
                    ++  + + ++i +++++++
     EPX71451.1 568 NMPFQGHLDAITFYYNFIR 586
                    ****************997 PP

>> M20_dimer  Peptidase dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.6   0.0   2.3e-12   1.4e-08       1     107 [.     310     459 ..     310     461 .. 0.94

  Alignments for each domain:
  == domain 1  score: 34.6 bits;  conditional E-value: 2.3e-12
                 SEB-EEEEEEEEEE-B-EEGG.-TTTTB-HHHHHHHHHHCSCTTEEC..................................................TC CS
   M20_dimer   1 ighkGlaggkitvkgkagHsg.apgagaNAieklarllaeledeegdia.............................................eersl 53 
                 +++kG++++ ++ k  +gHs+ +p +    i ++++l+ + e   ++ +                                             ++r++
  EPX71451.1 310 VAEKGYIDVVLRLKTPGGHSSiPPSHT--NIGIMSKLIPQVEVP-FEGKlvpenpffsslecfakyskgldehlrslilkkdtesltsilskskDTRYF 405
                 589******************888888..7***********997.444469************************************************ PP

                 CTCCCCCEECCE-CCCCEESSEEEEEEEEEHHHHHHHHHHHHHHHHHHTSCCST CS
   M20_dimer  54 prttlnvtgiegGsaknvipdeaeakidiRllpgedpeevleeieeilekeape 107
                  +t+++v +i+gG + n++p+e+ ++++ R++ + +++++ +  e+++++ a+e
  EPX71451.1 406 FETSIAVDVIRGGVKVNALPEETVVNVNHRISVEKNLQQLYDHYEQLVGRFAEE 459
                 *****************************************9999999887766 PP

>> Peptidase_M28  Peptidase family M28
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   9.3e-06     0.056       4      72 ..     177     264 ..     174     281 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 9.3e-06
                    EEESTTCE.SEEEEEEEE--B-TTT.................TCC..T---TTTTHHHHHHHHHHHHHCHHGGCCSSEEEEEEEESSCS CS
  Peptidase_M28   4 atlegkat.devlllgAHyDsvgvg.................rgp..ifvGAdDnAsgvaalLelarvlaasgsrpkrgvrflffdaEE 72 
                     t++g+++  + l+l+AH D v+++                 +       GA+D+  + + + e +++la+s  +p+r+v+  +   EE
     EPX71451.1 177 ITYKGSNEdLKPLVLMAHQDVVPIAeatldkwyfppfsatykD-GivYGRGATDDKNSLVGIFEALELLASSDFTPERTVIASIGFDEE 264
                    578888885569************9********9999887542.145556*****************************9987666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (589 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       605  (0.0337442); expected 358.6 (0.02)
Passed bias filter:                      540  (0.0301188); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.72u 0.33s 00:00:01.05 Elapsed: 00:00:00.56
# Mc/sec: 3170.80
//
Query:       EPX71452.1  [L=1887]
Description: 1,3-beta-glucan synthase subunit Bgs2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
          0 1327.9   0.0          0 1327.4   0.0    1.2  1  Glucan_synthase  1,3-beta-glucan synthase component
    3.5e-40  137.3   1.9    1.3e-39  135.4   1.9    2.1  1  FKS1_dom1        1,3-beta-glucan synthase subunit FKS1, domai
  ------ inclusion threshold ------
      0.092   13.0   0.2        0.2   11.9   0.2    1.5  1  XhlA             Haemolysin XhlA


Domain annotation for each model (and alignments):
>> Glucan_synthase  1,3-beta-glucan synthase component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ! 1327.4   0.0         0         0       1     818 [.     837    1658 ..     837    1659 .. 0.98

  Alignments for each domain:
  == domain 1  score: 1327.4 bits;  conditional E-value: 0
  Glucan_synthase    1 ffpknseaerRisfFaqslstplpealkvekmptFtvLiPhysEkillslkeiikeeekksrvtlleYLkqlypkeWknFvkdtkllaeeke 92  
                       +fp++seaerR+sfFaqsl+tp+pe+++v++mptFtvL+Phy Ekillslkeii+e++k srvtlleYLkql+++eWk+Fv+dtk+laee++
       EPX71452.1  837 YFPAHSEAERRLSFFAQSLATPIPEPIPVDTMPTFTVLVPHYGEKILLSLKEIIREQDKLSRVTLLEYLKQLHAHEWKCFVRDTKILAEEDA 928 
                       699*************************************************************************************9987 PP

  Glucan_synthase   93 ee....keeeekkeeellkekiedlpfyliGfkssepeytlrtriWaslrsqtLyrtvsGfmnYskalkllyrvenaslvellseeseklee 180 
                        +    +ee+++ ++++lk k +dlpfy+iGfk+++peytlrtriWaslrsqtLyrtvsGfmnYs+a+kllyrven+++ el++ + + le 
       EPX71452.1  929 LTqqdfEEEDTNGKSNILKGKFDDLPFYCIGFKNATPEYTLRTRIWASLRSQTLYRTVSGFMNYSRAIKLLYRVENPDVSELFAGQMDVLEY 1020
                       664555667777889999************************************************************************** PP

  Glucan_synthase  181 eleelaerKfklvvamqryakfkkeekenaelllkaypelkiaylde.eaeeeeeekeyysvLidgsseideengkrkekyrirLsGnpilG 271 
                       el+++a+rKfk++v+mqryakf++ee en+e++l+ayp+l iaylde   ee+e+++++y++Lidg+s+i+ engkr +kyrir+sGnpilG
       EPX71452.1 1021 ELDRMASRKFKMCVSMQRYAKFTAEEVENTEFILRAYPDLLIAYLDEdPLEEGETTPKLYAALIDGYSDIN-ENGKRIPKYRIRMSGNPILG 1111
                       ***********************************************44455888999***********98.******************** PP

  Glucan_synthase  272 dGKsdnqnhaiiftRGeyiqviDanqdnyleEclKirsvLaefeeleleskkpyaeeiekeeekepvailGaREyiFsenigvLgdiaagkE 363 
                       dGKsdnqn+a+ f+RGeyiq+iDanqdnyleEclKirs+Laefe ++  s+ py+e+  +  +++pvai+GaREyiFsenig+Lgd+aagkE
       EPX71452.1 1112 DGKSDNQNMALPFYRGEYIQLIDANQDNYLEECLKIRSILAEFEAFNSPSNDPYEETQ-EPYQNNPVAIMGAREYIFSENIGILGDVAAGKE 1202
                       *****************************************************98765.77899**************************** PP

  Glucan_synthase  364 qtFgtlfaRtlaeiggklHYGHPDflnaifmttRGGvsKaqkglhlnEDiyaGmnallRgGrikHseYiqcGKGRDlGfgsilnFttKigaG 455 
                       qtFgtlfaRt+a+iggklHYGHPDflnai+mttRGGvsKaqk+lh+nEDiyaGm+al+RgGrikH+eY+qcGKGRDlGfgsilnFttKig+G
       EPX71452.1 1203 QTFGTLFARTMAQIGGKLHYGHPDFLNAIYMTTRGGVSKAQKSLHVNEDIYAGMTALQRGGRIKHCEYYQCGKGRDLGFGSILNFTTKIGTG 1294
                       ******************************************************************************************** PP

  Glucan_synthase  456 mgEqlLsReyyylgtqlpldRfLsfyyahvGfhlnnllivlsvqlflllllnlgalekesiiceydkskkitdlekplgCynlkpvlewvki 547 
                       mgEq++sReyyylgtqlp+dRfLsfyyah+Gfh+nn++i+lsvqlf+++l+nlg++ + +++c+yd+++k t  ++p+gCy+l+pv++w+k+
       EPX71452.1 1295 MGEQMISREYYYLGTQLPFDRFLSFYYAHAGFHINNIFIMLSVQLFMVVLVNLGGMYHVVTVCDYDHNQKLTVKMRPEGCYQLNPVMNWLKR 1386
                       ******************************************************************************************** PP

  Glucan_synthase  548 vvlsifivffisflPllvqellergvlkavsrllkhllslsplfevfvcqiyaksllkdllfGgAkYiatGRgfavtrisfaelysrfasss 639 
                       +++sifivffisf+Pl+vqel+erg+++a++rl kh++s+splfevf+cq+ya s++ +++fGgA+Yi+tGRgfa++r+sf+ l+srfa+ s
       EPX71452.1 1387 CIISIFIVFFISFVPLTVQELTERGAWRALTRLGKHFASFSPLFEVFTCQTYAYSVIANISFGGARYIGTGRGFATARQSFSLLFSRFAAPS 1478
                       ******************************************************************************************** PP

  Glucan_synthase  640 iykgiellllllfatvtvwqaallyfwitvvslilaPflfnPhqfslldffvDyrdflrWlsrgnskskeesWisyvrqsrlritglkkkvl 731 
                       iy g+++ll+llf t++ w+++l+yfwi+ v+++++Pf+fnPhqf+++dffvDyr+f+rW+srgns+s+ +sWi y+r +r+ritg+k++++
       EPX71452.1 1479 IYLGSRTLLMLLFGTLSAWIPHLVYFWISTVAMCVSPFMFNPHQFAWNDFFVDYREFVRWMSRGNSRSHMNSWIGYCRLTRTRITGYKRRIM 1570
                       ******************************************************************************************** PP

  Glucan_synthase  732 geesekeskdvkrasllnlllseiilellvvlllliaylfinsqtgv.keaeatnsvlrlaivsllpillnvvvllvlfalslllgpl 818 
                       g + +k   d+ ra++ nl++se+++++l+v+ ++i+ylfinsq g  + ++atn++lr +i+++lpi++ + + l++  +++l+gpl
       EPX71452.1 1571 GVPVSKGFLDSPRARVGNLFFSELFIPFLLVIGTTIPYLFINSQPGNpDPEKATNPILRFVILAFLPIVVAAGLSLCFAGMACLMGPL 1658
                       **********************************************95667899******************************9986 PP

>> FKS1_dom1  1,3-beta-glucan synthase subunit FKS1, domain-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.4   1.9   2.2e-43   1.3e-39       2     128 ..     328     435 ..     327     436 .. 0.96

  Alignments for each domain:
  == domain 1  score: 135.4 bits;  conditional E-value: 2.2e-43
   FKS1_dom1   2 kvlqiaLylliWGEaanvRflpeclcyifkcaadyleseeakeeeeelkeleeileekvseaaaseeeesfLkkvitPlyevlrkqeaeknkegkyvrr 100
                 +++q+aLyll+WGEa+n+Rf+peclc++fk+a+d+++s e+++e+  +                  +e+ +L++v+tPly+++r+q++e+  egk+vrr
  EPX71452.1 328 QIRQVALYLLCWGEANNIRFCPECLCFLFKMALDFMQSDEYTAEKPPV------------------HEYYYLENVVTPLYNFIRNQQFEE-FEGKLVRR 407
                 689***********************************9999999998..................89********************99.9999**** PP

   FKS1_dom1 101 ekdHskiigYDDlNelFWskegieklkl 128
                 e+dH+++igYDD+N+lFW+++gi++++l
  EPX71452.1 408 ERDHAETIGYDDINQLFWYPQGINRIVL 435
                 *************************986 PP

>> XhlA  Haemolysin XhlA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.2   3.3e-05       0.2      47      67 .]    1380    1400 ..    1376    1400 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 3.3e-05
        XhlA   47 nqkWlirtiiGalisaviyli 67  
                   ++Wl+r+ii+++i+++i+++
  EPX71452.1 1380 VMNWLKRCIISIFIVFFISFV 1400
                  589***************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1887 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       813  (0.0453455); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.19u 0.44s 00:00:01.63 Elapsed: 00:00:00.60
# Mc/sec: 9435.25
//
Query:       EPX71453.1  [L=788]
Description: aconitate hydratase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   4.4e-150  500.7   0.0   5.8e-150  500.3   0.0    1.2  1  Aconitase    Aconitase family (aconitate hydratase)
    1.6e-42  145.0   0.1    2.6e-42  144.2   0.1    1.4  1  Aconitase_C  Aconitase C-terminal domain
  ------ inclusion threshold ------
       0.16   10.7   0.0       0.29    9.8   0.0    1.3  1  DUF521       Protein of unknown function (DUF521)


Domain annotation for each model (and alignments):
>> Aconitase  Aconitase family (aconitate hydratase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  500.3   0.0  9.7e-154  5.8e-150       1     461 []      74     510 ..      74     510 .. 0.94

  Alignments for each domain:
  == domain 1  score: 500.3 bits;  conditional E-value: 9.7e-154
   Aconitase   1 ekiwdahlv...ee...egiayv...pdrvllqdvtgvqalvdlaaareavrrlggtlatidhlvpvdlvidhsvgaeealeknledefernkeryefL 90 
                 eki++ hl    ++   +g++y+   pdrv++qd+t+++a+ ++++a+ +             +vp+++++dh+++a ++  ++l+++  +nke+y+fL
  EPX71453.1  74 EKILYGHLDdpvNQdieRGVSYLklrPDRVACQDATAQMAILQFMSAGMPE-----------VAVPTTVHCDHLIEAFSGGPEDLKRANVTNKEVYNFL 161
                 79999998855422565668888889**********************998...........9************************************ PP

   Aconitase  91 ksaakafgirvvppgqGIvHqvnlEyglalpgktvvgtDSHTtmigglGvlaiGvGgieaeavllgqplelkipkvvgvkltGklkegvtakDlvlavi 189
                 +sa+++++i ++ pg+GI+Hq+ lE+ +a+pg +++gtDSHT+++gglG+  iGvGg++a++v++  p+elk+pkv+gvkltGk++ ++ +kD++l+v+
  EPX71453.1 162 SSACAKYNIGFWRPGSGIIHQILLEN-YAFPGGLLIGTDSHTPNAGGLGMASIGVGGADAVDVMADLPWELKCPKVIGVKLTGKMSGWTAPKDVILKVA 259
                 **************************.************************************************************************ PP

   Aconitase 190 gklrkkgvvgkvvEffGegvesLsledraTiaNMaaEvGAttglfpvdektleYLkatgreeaavlveaydkaqalfelaadedaeydkvleldlstle 288
                 g+l++kg++g++vE+fG+gvesLs++++ Ti+NM+aE+GAtt++fp+++++ +YL+at+r++ a     y+++ a   +aade+a yd+v+e++lstle
  EPX71453.1 260 GILTVKGGTGAIVEYFGPGVESLSCTGMGTICNMGAEIGATTSIFPFNSRMSQYLRATNRSDIA----SYAEQFAP-VIAADENAPYDEVIEINLSTLE 353
                 ************************************************************9888....44443333.4789****************** PP

   Aconitase 289 psvagpkrPqdavplselvkkefkeelekeaaekaleyklkegtklkdgkvdiaaigSCTNssnedvraaagllakavekglkvkpgvktsvaPGSevv 387
                 p+v+gp++P+ a+p+s+++     +++            ++++++ +   +++++igSCTNss+ed+++aa++ ++a +kg k+k+   ++++PGSe+v
  EPX71453.1 354 PHVNGPFTPDLATPISKFK-----DAV------------KEQKWPEE---LKVGLIGSCTNSSYEDMSRAASICQQALDKGIKTKS--LFTITPGSEQV 430
                 ***************5544.....666............7789**99...*******************************99999..*********** PP

   Aconitase 388 kayleaeGlleiLekaGfevvgagCstCignsdrle....egeaivsssNRNFegRq..gpntrayLaSPelvvaaAlaG 461
                 +a+le++G le+++kaG  v++++C++Cig+++r +    e+++i++s+NRNF gR+  +p t+a+++SP lv+a+ +aG
  EPX71453.1 431 RATLERDGQLETMRKAGGVVLANACGPCIGQWKRTDvqkgEKNSIITSYNRNFTGRNdaNPATHAFVTSPDLVTAMVFAG 510
                 **********************************988877778**************76699999***********9998 PP

>> Aconitase_C  Aconitase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.2   0.1   4.4e-46   2.6e-42       2     130 ..     589     717 ..     588     718 .. 0.98

  Alignments for each domain:
  == domain 1  score: 144.2 bits;  conditional E-value: 4.4e-46
                  CCCCCCTT--CHHHHSTGGGCCGHCCHHHCCCGGTTTCCCCTTTSBBSEEEETTTTEEEEHHHHHHHHHHTT--EEEE--SSBTBS---THHHHHHHH CS
  Aconitase_C   2 ekllklkGlttedeksnvdtdlkipkqfegtianiglgnelveekrankttdlddgekedvvdaaerykkegaklvviagknfGeGSSRehAAkalrl 99 
                  ++l+k+kG++t+d++s+++++lk++++++++++n+++g+ + e+ +ank +++ +ge+  v++ a  y+++g+++v i+++nfGeGSSRehAA+++r 
   EPX71453.1 589 KILIKSKGKCTTDHISAAGPWLKYRGHLQNISNNYMIGAVNSENGEANKLKNQLTGEYDTVPNVAISYRDQGIRWVSIGEQNFGEGSSREHAALEPRY 686
                  5789********************************************************************************************** PP

                  TTEEEEEES-B-HHHHHHHHHTT-EEEEEST CS
  Aconitase_C 100 lGikaviaeSFerIfennliknglLplefke 130
                  lG+ a+i++SF+rI+e+nl+k+glLpl+f++
   EPX71453.1 687 LGGAAIITKSFARIHETNLKKQGLLPLTFAD 717
                  ****************************985 PP

>> DUF521  Protein of unknown function (DUF521)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0   4.8e-05      0.29     295     360 ..     388     459 ..     367     481 .. 0.68

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 4.8e-05
      DUF521 295 alG.cPhlsleElrelaell...kgkkkkvkvelwvtt.srevkeeaerlglveklekaGvkvlsdtC.mvv 360
                 ++G c   s+e++ + a+++    +k+ k k  + +t  s++v++++er g +e+++kaG+ vl++ C +++
  EPX71453.1 388 LIGsCTNSSYEDMSRAASICqqaLDKGIKTKSLFTITPgSEQVRATLERDGQLETMRKAGGVVLANACgPCI 459
                 554377789999999999994333344444544555543567**************************3333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (788 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       406  (0.0226449); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.72u 0.32s 00:00:01.04 Elapsed: 00:00:00.51
# Mc/sec: 4637.47
//
Query:       EPX71454.1  [L=722]
Description: hypothetical protein SOCG_01671 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-34  117.9  11.7    3.1e-10   40.3   0.4    5.4  5  CBS       CBS domain
    8.4e-12   44.9   0.0    1.9e-11   43.7   0.0    1.6  1  PB1       PB1 domain
  ------ inclusion threshold ------
        1.7    8.7   6.1       0.16   12.1   0.7    2.1  3  Milton    Kinesin associated protein


Domain annotation for each model (and alignments):
>> CBS  CBS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.0   0.0   1.8e-10   1.1e-06      10      54 ..      76     120 ..      67     123 .. 0.90
   2 !   40.3   0.4   5.2e-14   3.1e-10       1      54 [.     133     191 ..     133     194 .. 0.89
   3 !   25.6   0.1   2.1e-09   1.3e-05       6      54 ..     263     310 ..     255     313 .. 0.89
   4 !   24.5   0.1   4.6e-09   2.7e-05       3      55 ..     325     377 ..     323     379 .. 0.90
   5 ?    2.2   0.0     0.043   2.6e+02       8      30 ..     612     634 ..     604     642 .. 0.78

  Alignments for each domain:
  == domain 1  score: 29.0 bits;  conditional E-value: 1.8e-10
                 EEEETTSBHHHHHHHHHHHTSSEEEEEETTTBEEEEEEHHHHHHH CS
         CBS  10 vtvppdttleealelmrekgvsrlPVVdedgklvGivtlrDllra 54 
                 +tv+  +++ e ++lm+ k+ ++++V+de+g+l Gi+t  D++++
  EPX71454.1  76 LTVHMHSSITETAQLMAAKRQDCVLVIDEEGQLTGILTSGDIAKK 120
                 699*************9999**********************987 PP

  == domain 2  score: 40.3 bits;  conditional E-value: 5.2e-14
                 HHHHSBSSCEEEETTSBHHHHHHHHHHHTSSEEEEE.....ETTTBEEEEEEHHHHHHH CS
         CBS   1 VgdimtrdvvtvppdttleealelmrekgvsrlPVV.....dedgklvGivtlrDllra 54 
                 V+dimt  +++++ dt +  alelm+e+++++lPVV      ++g ++Gi+ +r  lr 
  EPX71454.1 133 VADIMTNGPICITSDTRIDAALELMIEHHIRHLPVVsdgeeGDEGDVIGIINMRTCLRE 191
                 89**********************************9877644555*******998875 PP

  == domain 3  score: 25.6 bits;  conditional E-value: 2.1e-09
                 BSSCEEEETTSBHHHHHHHHHHHTSSEEEEEETTTBEEEEEEHHHHHHH CS
         CBS   6 trdvvtvppdttleealelmrekgvsrlPVVdedgklvGivtlrDllra 54 
                 t ++v v   tt++ea+e m++++vs+++V+ e+g + Gi+t +D++  
  EPX71454.1 263 TQEPVLVGTRTTVAEAAESMAHANVSSVLVM-ENGAVSGIFTSHDIVLR 310
                 5678899999**********8888****999.9**999********876 PP

  == domain 4  score: 24.5 bits;  conditional E-value: 4.6e-09
                 HHSBSSCEEEETTSBHHHHHHHHHHHTSSEEEEEETTTBEEEEEEHHHHHHHH CS
         CBS   3 dimtrdvvtvppdttleealelmrekgvsrlPVVdedgklvGivtlrDllral 55 
                  +mt+ + ++  d  ++ ale+m e +++ lP+Vded+ +vG+++l +l  a+
  EPX71454.1 325 RVMTPHPDCALIDLRVSTALERMLEGKFNFLPIVDEDDSIVGLLSLFHLSTAI 377
                 689999999999999********9999*******************9997776 PP

  == domain 5  score: 2.2 bits;  conditional E-value: 0.043
                 SCEEEETTSBHHHHHHHHHHHTS CS
         CBS   8 dvvtvppdttleealelmrekgv 30 
                 dvv ++ d++l+ea+ l r++g+
  EPX71454.1 612 DVVEITSDADLREAIFLTRRRGL 634
                 56888999999999988877443 PP

>> PB1  PB1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.7   0.0   3.2e-15   1.9e-11       4      71 ..     564     631 ..     561     641 .. 0.83

  Alignments for each domain:
  == domain 1  score: 43.7 bits;  conditional E-value: 3.2e-15
                 EEEEETTEEEE..EEEEGSSS-HHHHHHHHHHHHTSTCCSEEEEEEETTSSEEEESSHHHHHHHHHHHHH CS
         PB1   4 lKlrygggirr..elsvssnisfeeLrakvekrfklsdedvklkYpdedgdlVtitsDeDLeealeears 71 
                 ++++y+  i r  +l+++  +s+++L + v+ r ++  ++++l+Y+d++gd+V+itsD+DL+ea+   r+
  EPX71454.1 564 FSIKYRSTIGRvhRLRLDQISSLSDLQKAVSNRENE--QNITLTYIDDEGDVVEITSDADLREAIFLTRR 631
                 44555555555559**********************..8*************************976655 PP

>> Milton  Kinesin associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.7   2.7e-05      0.16      16      86 ..       9      76 ..       1      88 [. 0.78
   2 ?   -2.8   0.0      0.99   5.9e+03      19      34 ..     221     237 ..     208     267 .. 0.62
   3 ?   -3.9   0.1       2.1   1.3e+04       8      26 ..     646     664 ..     644     683 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.7e-05
      Milton 16 qslssltslrsSssstPrssvyggdgssvsldnrtssilsetsssedsgeeepkkaGvPGapGakdLeaAL 86
                 s+ s +    S +s  r   y   +++ +l  +  + ls++s + ds   + k+ G PG+  +  L+aAL
  EPX71454.1  9 SSVVSSSYSDVSYVSDTRKRQY---KKDETLRRKIATELSKKSANLDSPVRSTKRHGEPGTVESVALDAAL 76
                2222223344566777777777...55799*****************99999******************9 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.99
      Milton  19 ssltslrsSs.sstPrs 34 
                 s+ +s++ Ss s++P++
  EPX71454.1 221 SASGSTNNSShSGGPHA 237
                 33344333330334553 PP

  == domain 3  score: -3.9 bits;  conditional E-value: 2.1
      Milton   8 spnipgsnqslssltslrs 26 
                 s  ++g+n  ls+++s   
  EPX71454.1 646 SHTVDGFNPVLSTVGSSAG 664
                 5578999999999887643 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (722 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       637  (0.035529); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.27s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 4972.98
//
Query:       EPX71455.1  [L=107]
Description: hypothetical protein SOCG_01672 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00041   20.3   2.1    0.00058   19.8   2.1    1.3  1  FlxA      FlxA-like protein
    0.00054   20.0   3.9    0.00063   19.8   3.9    1.3  1  Med9      RNA polymerase II transcription mediator complex su
  ------ inclusion threshold ------
      0.033   14.5   2.8      0.047   14.0   2.8    1.3  1  TBCA      Tubulin binding cofactor A
      0.073   13.3   1.9      0.096   12.9   1.9    1.3  1  Spc24     Spc24 subunit of Ndc80


Domain annotation for each model (and alignments):
>> FlxA  FlxA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   2.1   1.3e-07   0.00058      16      72 ..      40      95 ..      28     104 .. 0.84

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 1.3e-07
        FlxA 16 asqiasLqkQiknlqkqLkelsesdeltkeekkkqqqliqaQIqqlqaQIaqlqqqq 72
                ++++  L++ i++l+ + ++l+++ e+t eekk  + ++q+ I+  +a + ++ ++ 
  EPX71455.1 40 SKELTLLRQSIQTLKTKASNLKSE-EMTLEEKKCAIRMLQSRISLKRAFLSRIRAES 95
                4567789999*************9.******************98777777777665 PP

>> Med9  RNA polymerase II transcription mediator complex subunit 9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   3.9   1.4e-07   0.00063      19      78 ..      34      93 ..      10      95 .. 0.89

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 1.4e-07
        Med9 19 lsskdletktgelrhkLkkarelirelpgidrsveeqeaeieeleeqlakKrelLkkykn 78
                + +   ++++  lr+ +++ ++  ++l+  + + ee +  i+ l+ ++  Kr++L++++ 
  EPX71455.1 34 RKVIAASKELTLLRQSIQTLKTKASNLKSEEMTLEEKKCAIRMLQSRISLKRAFLSRIRA 93
                555567889999********************************************9986 PP

>> TBCA  Tubulin binding cofactor A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   2.8     1e-05     0.047      18      82 ..      39      99 ..      30     103 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1e-05
        TBCA 18 YekEleeqearleklkadgdedeydlkkqeevleetkamipdlkkrlekavekLeelleeeeele 82
                  kEl   ++ +++lk++      +lk +e  lee k  i  l++r++   + L+++ +e+e+ +
  EPX71455.1 39 ASKELTLLRQSIQTLKTKA----SNLKSEEMTLEEKKCAIRMLQSRISLKRAFLSRIRAESETAN 99
                579**************98....46************************9999999988876554 PP

>> Spc24  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   1.9   2.1e-05     0.096       5      43 ..      35      73 ..      31     102 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2.1e-05
       Spc24  5 ekfriakelsdleselesleselaelkeeleeleeesee 43
                + ++++kel+ l ++++ l+++ ++lk+e  +lee++ +
  EPX71455.1 35 KVIAASKELTLLRQSIQTLKTKASNLKSEEMTLEEKKCA 73
                668899*****************************9866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1066  (0.0594567); expected 358.6 (0.02)
Passed bias filter:                      429  (0.0239277); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.36u 0.27s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 800.53
//
Query:       EPX71456.1  [L=66]
Description: cytochrome c oxidase subunit VIII [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-12   47.1   1.4    2.5e-12   46.9   1.4    1.0  1  COX7C     Cytochrome c oxidase subunit VIIc


Domain annotation for each model (and alignments):
>> COX7C  Cytochrome c oxidase subunit VIIc
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.9   1.4   1.4e-16   2.5e-12       3      63 ..       5      64 ..       3      65 .. 0.88

  Alignments for each domain:
  == domain 1  score: 46.9 bits;  conditional E-value: 1.4e-16
                .XXXXXXXXXXX.XXXX-S--STTTSSSS--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHT CS
       COX7C  3 rlvarRafhtsarsrsghykegpysnLPFsknnKipfavkywgflgvgFalPFlavrwQlk 63
                r++ar a++  +  +s+h++++p+s++PF++++K+  +++++g +g+++alP ++v++Q +
  EPX71456.1  5 RISARSALRGVR-FSSSHAPPQPGSTVPFYVSKKAIPSMLFFGSFGFVLALPLIVVKYQNR 64
                455666666655.99********************************************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       226  (0.0126053); expected 358.6 (0.02)
Passed bias filter:                      162  (0.00903564); expected 358.6 (0.02)
Passed Vit filter:                         9  (0.00050198); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.26s 00:00:00.63 Elapsed: 00:00:00.42
# Mc/sec: 468.46
//
Query:       EPX71457.1  [L=391]
Description: diphosphomevalonate decarboxylase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.1e-67  224.4   0.3    1.4e-66  223.8   0.3    1.3  1  MDD_C           Mevalonate 5-diphosphate decarboxylase C-term
    3.5e-08   33.6   0.4    1.3e-07   31.7   0.4    2.1  1  GHMP_kinases_N  GHMP kinases N terminal domain


Domain annotation for each model (and alignments):
>> MDD_C  Mevalonate 5-diphosphate decarboxylase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  223.8   0.3   1.5e-70   1.4e-66       2     187 .]     198     375 ..     197     375 .. 0.93

  Alignments for each domain:
  == domain 1  score: 223.8 bits;  conditional E-value: 1.5e-70
       MDD_C   2 lilvvsdekkkvsStsGmqrsvetSeLlkhrakevvperieelekAikekdFetfaeitmkdSnqlhavcldtyPpifYlndtSraiielvhelNeaag 100
                  i+v s++kk vsStsGmq +v++S+L+++r+k++vp r++++++Ai+++dFetfa++tm+dSnq+ha+cldt PpifYlndtSraii++v+++N+aag
  EPX71457.1 198 AIMVASAAKKGVSSTSGMQATVASSTLFQERIKNIVPGRMQAMKQAIRNRDFETFANLTMTDSNQFHACCLDTLPPIFYLNDTSRAIIRVVENINAAAG 296
                 69************************************************************************************************* PP

       MDD_C 101 kikvAYtFDAGpNavlyleekdveellsllkklfppesdaeefvkgakveeaaelseelkaslalkeskgavkriiltkvgdGpkvl 187
                 k+ +AYtFDAGpNav+y++e++ + +l++l+++ ++++ ++e +++ ++ ++        +++a+++ ++ v+r+iltk+gdGp++l
  EPX71457.1 297 KTIAAYTFDAGPNAVVYFLEENSSFILDALHAVSKHAEGWNESARNPTSVKI--------DDVAAETVSSGVSRVILTKIGDGPRIL 375
                 ********************************99998888777665544444........4556678899**************985 PP

>> GHMP_kinases_N  GHMP kinases N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.7   0.4   1.5e-11   1.3e-07       1      66 []     108     166 ..     108     166 .. 0.82

  Alignments for each domain:
  == domain 1  score: 31.7 bits;  conditional E-value: 1.5e-11
                     EEEEEESSHTTSSSCHHHHHHHHHHHHHHHHTTEHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHSS CS
  GHMP_kinases_N   1 divikseiPvgaGLGSSAAlavalvaAllallglsleeaklaleaerlaqggngsggDvaasvyGg 66 
                     ++v+++++P++aGL+SSAA  +a + A+++l++       l+ +  +l   ++ + g ++ s++Gg
      EPX71457.1 108 HVVSENNFPTAAGLASSAAGYAAFTEAIARLYD-------LTWTPTELSRIARQGSGSACRSLFGG 166
                     6899****************************5.......55555555555677777788888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (391 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       651  (0.0363099); expected 358.6 (0.02)
Passed bias filter:                      527  (0.0293937); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 2680.99
//
Query:       EPX71458.1  [L=218]
Description: cytochrome c1 heme lyase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.1e-44  152.3  12.3    5.3e-43  147.7  12.3    2.6  1  Cyto_heme_lyase  Cytochrome c/c1 heme lyase
  ------ inclusion threshold ------
       0.23   11.3   0.3       0.42   10.5   0.3    1.4  1  COX2-transmemb   Cytochrome C oxidase subunit II, transmembra


Domain annotation for each model (and alignments):
>> Cyto_heme_lyase  Cytochrome c/c1 heme lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.7  12.3   5.9e-47   5.3e-43      91     292 .]      34     205 ..       1     205 [. 0.84

  Alignments for each domain:
  == domain 1  score: 147.7 bits;  conditional E-value: 5.9e-47
  Cyto_heme_lyase  91 qerapeqkvdLpteReissiPkg......deeglWeYPspqqmynAmlrKGyedipedavesmvavHnflnEgaWeeileWEkkfakglakgwk 178
                      q + p   v+L+t+Reis iPk+      +ee +W YPs++++++Am rK ++  ++++++ +v +Hn++nE+aW+eil+WEk + +       
       EPX71458.1  34 QPHPPASPVELSTDREISGIPKAktdpndQEEAKWIYPSQKMFFEAMKRKNWN-PDASDMKTIVPIHNAVNEKAWKEILDWEKGWGS------- 119
                      334567899**************99887555669*****************96.57889************************9999....... PP

  Cyto_heme_lyase 179 kckrgeekveeelekeeePkLlrFqGrpkelsPkarllqllgklfPskfstelPFDRHDWlvlRkteeeekkevrYviDyYsgpdeetGepvfl 272
                           e+           P+L +FqG+ k+l+Pkar+l++lg+        + PFDRHDWlv+R+      ++v YviD+Y+gp  + G p ++
       EPX71458.1 120 -----ESC--------GGPRLEQFQGNVKKLTPKARVLNFLGY--------NKPFDRHDWLVDRC-----GQKVCYVIDFYNGPSVQ-GVPSMF 186
                      .....333........38************************9........89************.....5789*********9876.9***** PP

  Cyto_heme_lyase 273 lDvRPaldsltaaadRlvrw 292
                      lDvRP l +++ a+ R+ rw
       EPX71458.1 187 LDVRPKL-TVHGAWMRFYRW 205
                      *******.999********9 PP

>> COX2-transmemb  Cytochrome C oxidase subunit II, transmembrane
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.3   4.7e-05      0.42       4      16 ..     105     117 ..     103     122 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 4.7e-05
                     HHHHHHHHHHHHH CS
  COX2-transmemb   4 KAHKAiLAYEKGW 16 
                     KA K iL +EKGW
      EPX71458.1 105 KAWKEILDWEKGW 117
                     9************ PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       407  (0.0227007); expected 358.6 (0.02)
Passed bias filter:                      289  (0.0161191); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1546.76
//
Query:       EPX71459.1  [L=596]
Description: spindle pole body docking protein Cut11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   1.2e-111  374.3  16.8   1.5e-111  374.1  16.8    1.0  1  Ndc1_Nup     Nucleoporin protein Ndc1-Nup
  ------ inclusion threshold ------
       0.78    9.9   5.6      0.095   12.8   0.4    2.2  2  Cyt_c_ox_IV  Cytochrome c oxidase subunit IV


Domain annotation for each model (and alignments):
>> Ndc1_Nup  Nucleoporin protein Ndc1-Nup
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  374.1  16.8  1.6e-115  1.5e-111       1     609 [.      25     584 ..      25     585 .. 0.90

  Alignments for each domain:
  == domain 1  score: 374.1 bits;  conditional E-value: 1.6e-115
    Ndc1_Nup   1 pvlhrRfvhaallllllsyllslllslsssllwswfplgpaglralllflsllpilvlrkaqlhvgprttssrlstllaslfslqtletllvyllSall 99 
                 p+l++Rf +a+l+l +l++++s++l++  s ++s  ++ +++l++ll+fl+++p++v+ k+ +++++  +ss ++ ++ ++++++++   + +l+S  +
  EPX71459.1  25 PILQQRFLRASLALYCLCCVTSYWLAS-GS-IFSPKLILGSFLKGLLCFLFVFPYFVMLKSRMTTTRDVQSSLAKEIMIKFSPKSFFPVYISFLVSVGI 121
                 79************************6.55.46777777799********************************************************* PP

    Ndc1_Nup 100 faevyiwslpedarlgwvtskssrerprlNerplflllsglvlalvysllhllfdrdrlsfkssfpivqpskyllkrlpsilkkslilslvlllvspii 198
                 +a+ y+  ++ ++rl+wvt  + +e prlNer++++++ + ++a++ ++ hl+fd d+   ++++  ++ + y++++lpsi+ +s+i+sl++ ++spii
  EPX71459.1 122 LALAYLQGHS-SSRLQWVTAARAYELPRLNERFVYMMFVASMMAFSSACEHLYFDLDTP--EEPVLQKSFVLYVKEKLPSIFQSSIIKSLICGFASPII 217
                 ******7776.578*********************************************..5666666666666777********************** PP

    Ndc1_Nup 199 yylllrsfiwslalillrlflnlprsaapppldslpfnlsLllrtlllgflllllwelanllFdvyltegplkkgkpisseskdpngtLlsGLks.kkp 296
                  y+++rs+iw+++l+++r+f+ l +s+a+     +p+nl+Ll+++l+++fl+ ++  +a l+F+v+l  gp+ + + is  s+dpngtLl+G+k  +kp
  EPX71459.1 218 -YAIFRSSIWRTFLLFTRCFHRLAASKALVR---WPVNLGLLVHSLWMTFLINISLSIALLIFRVFLYAGPVVRSRFISMRSNDPNGTLLDGIKTrNKP 312
                 .**********99********9999888765...***************************************************************** PP

    Ndc1_Nup 297 lvklfAfqELaliaqsspsrRkaIFsdidrkggstWsqilkeClklikeltqrinergq.papkaapskapknkasapvkelprlsksplkkkddeifg 394
                 l++++A qEL+li++++p+r + I +didrk  s+W++il+  l l+++l+++++ +++ ++p+ +  +a+++++  ++++  ++++ +lk+  ++if+
  EPX71459.1 313 LTQCIASQELFLICSKDPKRIQGILQDIDRKT-SVWQEILNNTLVLCENLSTSLQLSSSgKKPNGVD-SAQSSSRLGSSTTDDSFNTISLKE--KDIFA 407
                 ********************************.***********************99977777777.666777777788888888888888..88**9 PP

    Ndc1_Nup 395 nsltaeaspkssssskegvekalsslakspgqspsptarlsprarkllekaksrllskeqkealsestikkkvekelaqllkspligylFrqslrrrle 493
                       + +++ s  +e+v++  +  a++ +q +                        + +e+l +++ +k+++++l+ ++k++ ++ +Fr++l+r+ +
  EPX71459.1 408 ------QGASRRSRILEKVKEHGNFSAPDASQ-N------------------------SFAESLIPASLRKQCSQYLSVVYKTS-LFNIFRKTLDRKNA 474
                 ......66666666677777643333333222.1........................12233445666667767777788888.************** PP

    Ndc1_Nup 494 alvsnpqliinaieaLsnLvvaSltEDqyGvVqrdvpeIlrtLtsllealekfkeglpahwtdekgeaesskrespkeldevdelldalktalyeIlla 592
                  +++np l+   i++Ls Lv +Sl+ D+yGvV rd+++Il+++++++++l ++k+++p+h++d+ +    skr +    d++d ++++lk+++ eI+++
  EPX71459.1 475 DVLKNPWLLEVRITSLSLLVLKSLQYDTYGVVARDISDILTVYCDTYDKLIAYKRNPPIHSSDVFA----SKRTHD--FDDMDRVISCLKDGIVEITEK 567
                 *****************************************************99*****998888....666555..899****************** PP

    Ndc1_Nup 593 Fgeylndlrlspkvlrl 609
                 F++++ +l+++ +v r+
  EPX71459.1 568 FQDFFIQLNIPTQVERR 584
                 ***********999887 PP

>> Cyt_c_ox_IV  Cytochrome c oxidase subunit IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.4   1.1e-05     0.095      10     103 ..      35     126 ..      28     131 .. 0.71
   2 ?   -2.8   0.8      0.73   6.6e+03      98     119 ..     251     274 ..     239     283 .. 0.55

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.1e-05
  Cyt_c_ox_IV  10 llavffllvavvYgvltkie.elvGttalvltgglall.vgtylafvarridarpedredaeiadgaGelGffsPhSwwPlvlalaaalaalglal 103
                   la+++l++ + Y++ +     +  +++ +l g l++l v+ y+ +++ r+ +   d +++  ++    +  fsP+S++P++++  +++ +l+la+
   EPX71459.1  35 SLALYCLCCVTSYWLASGSIfSPKLILGSFLKGLLCFLfVFPYFVMLKSRMTTT-RDVQSSLAKE---IMIKFSPKSFFPVYISFLVSVGILALAY 126
                  567777777778888876445777778888999998762555888888887654.3333322222...3568*****************9999986 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.73
  Cyt_c_ox_IV  98 alglal.gwWllli.gvvlvlial 119
                   lgl +  +W++++  + l ++ l
   EPX71459.1 251 NLGLLVhSLWMTFLiNISLSIALL 274
                  456666566775530333444333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (596 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       608  (0.0339115); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 4121.01
//
Query:       EPX71460.1  [L=651]
Description: phospholipase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.8e-184  613.1   5.3   3.4e-184  612.9   5.3    1.1  1  PLA2_B    Lysophospholipase catalytic domain
  ------ inclusion threshold ------
       0.09   13.4   0.4       0.21   12.3   0.4    1.6  1  BIR       Inhibitor of Apoptosis domain


Domain annotation for each model (and alignments):
>> PLA2_B  Lysophospholipase catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  612.9   5.3  3.8e-188  3.4e-184       1     491 []     121     607 ..     121     607 .. 0.96

  Alignments for each domain:
  == domain 1  score: 612.9 bits;  conditional E-value: 3.8e-188
      PLA2_B   1 iaiavSGGGyramltgaGvlkAldsRtdnatglgGlLqsatYlaGlsGgsWlvgslavNnftsvqelskkkeddsvweleksilnpeglelvknikryd 99 
                 ++iavSGGGyr+m  g+G+l+A+d R++++t lgGlLq a+Y++G++GgsWlv+sla+N+f++vq+ls+      +w+ +  i+  e++++ +n ++y+
  EPX71460.1 121 LGIAVSGGGYRSMFYGGGALAAFDRRSNETT-LGGLLQGASYITGADGGSWLVSSLAINDFRTVQNLSS-----TIWYSRLGIFFVEETHFGDNKNYYT 213
                 69**********************7766666.*************************************.....8************************ PP

      PLA2_B 100 eivdevekKkdagfnvsltDiwGralseklveaeeggvnltlsslkdaekfqeaemplPiivadgrk....pgetvinlNatvfEfsPyelgswdakln 194
                 ++vdev++K++agfnvsltD+wGra++++ +   +gg+++t+ss+++a++fq+ae+p+Piiv++g      +g+++++ N++++EfsPy++ ++d++++
  EPX71460.1 214 DLVDEVNQKAAAGFNVSLTDYWGRAIARHTTGRLRGGPDTTYSSVQNASWFQNAEYPYPIIVSQGLPgalsDGHNATSSNSSIYEFSPYYFNTFDNNVR 312
                 ****************************************************************98666669*************************** PP

      PLA2_B 195 sFvpveylGtklsnGtvvkkgkcvagfdnaGflmgtsstlFnevlleinsts.mlesllkellkkllkdlsedsedisqyapnpfkdaeeenqnatq.. 290
                 +++p+eylGtkl+nG++  ++kcv++fdn+Gfl+gtsst Fne+l+ ++ ++  + + l  +l+++  + s+    +s y+ n f +a++++ + t+  
  EPX71460.1 313 AYMPLEYLGTKLNNGSSI-DNKCVTQFDNVGFLIGTSSTRFNEALIGVSLRDsRMSRRLGFTLRHMRINGSA----VSYYN-NMFDGASSIAGDGTAas 405
                 ******************.9***************************9998865668899999999999998....99999.********987766545 PP

      PLA2_B 291 .sivesktLdlvdggedgqniplvpllqkerevdvifaldnsadteeswpdgvslvatyeRvle..skqv.kgkkfpyvpdqntfvnlgLnkrptffGc 385
                   ++ ++++dl dgg d+qnip++pllq+er+vdvifald+s+dte++wp+g+slv+tyeR+++  s+++  +++f+++p+ +tf+nlgLn+rptffGc
  EPX71460.1 406 dGLTTAPYVDLYDGGADNQNIPVWPLLQPERRVDVIFALDASSDTENNWPNGTSLVSTYERITQkaSDASyGVNSFVHIPSVETFINLGLNNRPTFFGC 504
                 589999*********************************************************98533334799************************* PP

      PLA2_B 386 DarnltdlsatvdestpPlvvylpnekysylsnlstfklsykdseregliengfeaatqdnetdddefaacvacaiirRklerknltlpsecekcFedy 484
                 D+rn+t+ s++vde+tpPl+vylpn+++++ sn+++ ++++ +s+++gl++ngf+aatq+n   +++fa+c+aca+i+R+lerkn+++p++c++cF++y
  EPX71460.1 505 DGRNTTSQSQHVDENTPPLLVYLPNSPWTTESNIADDRYRLGNSDIQGLVRNGFVAATQNN---STDFASCLACAVIQRSLERKNQSAPQACQQCFSQY 600
                 ************************************************************9...99********************************* PP

      PLA2_B 485 cwngtvd 491
                 cwngtvd
  EPX71460.1 601 CWNGTVD 607
                 *****86 PP

>> BIR  Inhibitor of Apoptosis domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.4   2.4e-05      0.21      18      56 ..     548     586 ..     540     601 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 2.4e-05
         BIR  18 psaeeLaeaGFyytptseskdnvqCfyCklaldgweedD 56 
                  +++ L+++GF+ + +++s d + C +C    ++ e+++
  EPX71460.1 548 SDIQGLVRNGFVAATQNNSTDFASCLACAVIQRSLERKN 586
                 56789***********************98777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (651 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       572  (0.0319036); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.30s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 4521.00
//
Query:       EPX71461.1  [L=637]
Description: triacylglycerol lipase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-42  143.1   0.1    8.3e-42  142.2   0.1    1.5  1  DUF3336   Domain of unknown function (DUF3336)
    1.2e-16   61.5   0.1    2.2e-16   60.7   0.1    1.5  1  Patatin   Patatin-like phospholipase


Domain annotation for each model (and alignments):
>> DUF3336  Domain of unknown function (DUF3336)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.2   0.1   9.3e-46   8.3e-42       2     137 ..     107     243 ..     106     244 .. 0.97

  Alignments for each domain:
  == domain 1  score: 142.2 bits;  conditional E-value: 9.3e-46
     DUF3336   2 vawrgkrkklrkklrkattYeeWkeaAkeLDellgndeWkendes.yYdyklvkkvlkkLrklrekedlkellellrtclkrNfagienprLYsetyiG 99 
                 + wrg+   lr++l++a+t++eWk+ A++LD++ gn+eWk ++ + yYdy+l++ vl++Lr +r++ ++ +l ++l  c+++Nfa i++p LYs+ty G
  EPX71461.1 107 IVWRGRPALLRQRLQDAKTFDEWKQRARDLDDYFGNNEWKLDPVYdYYDYSLLRTVLRSLRIHRQRGEWAQLKSTLDVCVRSNFAAIDSPMLYSRTYSG 205
                 68************************************************************************************************* PP

     DUF3336 100 TKklieeYidevekalellaetkqlsaeekleffketr 137
                 TKkl+e+Yide+ ++l++++++k  + +e  ++f+ ++
  EPX71461.1 206 TKKLVEDYIDELAQCLQVVIDKKLYPPQERSRMFEYFS 243
                 **********************99999**999998766 PP

>> Patatin  Patatin-like phospholipase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.7   0.1   2.4e-20   2.2e-16       1     201 [.     251     439 ..     251     442 .. 0.86

  Alignments for each domain:
  == domain 1  score: 60.7 bits;  conditional E-value: 2.4e-20
     Patatin   1 LvlsGGGsrgafslgalkaLkkelgerfdiisGtSaGAiialllalgrdpaalvddlrnlllnkifdrdllirelaanlaarlsgllgkgglfdaealr 99 
                 L+lsGG s ++++ g+l+aL  +    + +i+GtS+G+i+a+l+++ r+ ++l+  l+  l+ k+ ++          +    ++++++g+ fd ++++
  EPX71461.1 251 LCLSGGASFALYHTGVLAAL-LDQDLLPNVITGTSGGGILAALVCT-RTNDELRHLLVPELAPKFQSDI-------GSYIDCAKRYFQTGARFDENVWA 340
                 9******************9.9*******************55555.699999**************99.......8********************** PP

     Patatin 100 ellr.kvladktlkrlsarlgklpllkslftanqavpaittataatastanranglytedddddvdladavraSsafPglfppvsl............. 184
                 ++    + +++t+ ++ +r g++                  +  +  s+a  +  l ++ + +d  +++av aS+a+Pg+++p  l             
  EPX71461.1 341 RTCMfFTRGSMTFAEAYKRTGRI-----------------LNISVIPSDAHSPPKLINYLTSPDTVIWSAVIASCAVPGILNPIPLmtrgpsgkliphn 422
                 **995345667777777777777.................78888999999999999999999******************998887766655445444 PP

     Patatin 185 dgelyvDGGilsNvPil 201
                  g+++ DG+++  +P+ 
  EPX71461.1 423 FGNRFKDGSLRTDIPLG 439
                 44599****99999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (637 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       540  (0.0301188); expected 358.6 (0.02)
Passed bias filter:                      509  (0.0283898); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.27s 00:00:00.91 Elapsed: 00:00:00.43
# Mc/sec: 4442.79
//
Query:       EPX71462.1  [L=1176]
Description: ATPase with bromodomain protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.8e-49  166.5   0.0    7.6e-41  139.6   0.0    2.6  2  AAA              ATPase family associated with various cellul
    1.7e-08   34.2   0.0    5.5e-08   32.5   0.0    1.8  1  AAA_lid_3        AAA+ lid domain
    1.7e-07   31.5   0.0    1.4e-05   25.2   0.0    2.7  2  AAA_2            AAA domain (Cdc48 subfamily)
    1.8e-06   27.8   0.0    5.6e-06   26.2   0.0    1.8  1  IstB_IS21        IstB-like ATP binding protein
    3.6e-06   27.4   0.0    2.4e-05   24.8   0.0    2.4  1  AAA_16           AAA ATPase domain
    4.7e-05   23.4   0.1     0.0015   18.5   0.0    3.2  2  AAA_5            AAA domain (dynein-related subfamily)
    0.00066   20.0   0.2      0.054   13.8   0.1    3.8  3  AAA_22           AAA domain
     0.0011   19.3   0.0      0.005   17.2   0.0    2.2  1  RNA_helicase     RNA helicase
     0.0016   18.5   0.0     0.0052   16.8   0.0    1.9  1  Bromodomain      Bromodomain
     0.0038   17.4   0.1      0.017   15.3   0.0    2.3  2  AAA_33           AAA domain
     0.0055   16.4   0.0       0.42   10.3   0.0    2.9  3  Sigma54_activat  Sigma-54 interaction domain
     0.0078   16.3   0.0        2.1    8.4   0.0    2.6  2  Sigma54_activ_2  Sigma-54 interaction domain
  ------ inclusion threshold ------
      0.012   16.2   2.2      0.066   13.8   0.0    3.4  2  AAA_18           AAA domain
      0.018   14.3   2.0      0.052   12.8   0.0    2.5  3  DUF2075          Uncharacterized conserved protein (DUF2075)
      0.019   14.9   0.0       0.11   12.4   0.0    2.3  2  NACHT            NACHT domain
      0.026   14.3   0.0      0.053   13.2   0.0    1.5  1  AAA_30           AAA domain
      0.027   15.0   0.1       0.15   12.6   0.0    2.3  1  ABC_tran         ABC transporter
      0.028   13.8   0.0      0.054   12.9   0.0    1.4  1  Mg_chelatase     Magnesium chelatase, subunit ChlI
      0.032   14.0   0.0       0.15   11.8   0.0    2.1  2  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
      0.043   13.8   0.0       0.17   11.9   0.0    2.1  1  AAA_14           AAA domain
      0.047   13.9   1.9       0.17   12.1   0.0    2.6  2  AAA_28           AAA domain
      0.051   12.8   0.0       0.11   11.6   0.0    1.5  1  TIP49            TIP49 P-loop domain
      0.053   13.1   0.1       0.18   11.3   0.0    2.0  1  AAA_25           AAA domain
      0.066   12.7   0.0       0.14   11.5   0.0    1.5  1  PhoH             PhoH-like protein
      0.079   12.0   0.0       0.15   11.2   0.0    1.3  1  Parvo_NS1        Parvovirus non-structural protein NS1
        0.1   12.1   0.0       0.37   10.3   0.0    1.8  2  AAA_7            P-loop containing dynein motor region
       0.11   11.6   0.0       0.29   10.2   0.0    1.7  1  PIF1             PIF1-like helicase
       0.41   10.4   0.0       0.41   10.4   0.0    4.2  1  AAA_11           AAA domain
       0.97    9.9   0.0       0.97    9.9   0.0    3.6  2  AAA_23           AAA domain


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.6   0.0   1.2e-43   7.6e-41       1     131 [.     317     451 ..     317     452 .. 0.95
   2 !   24.3   0.0   5.5e-08   3.4e-05       1     119 [.     619     730 ..     619     742 .. 0.88

  Alignments for each domain:
  == domain 1  score: 139.6 bits;  conditional E-value: 1.2e-43
                 EEEESSTTSSHHHHHHHHHHHH.....THEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHH CS
         AAA   1 vllyGppGtGKTllakavakel.....gvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteld 94 
                 vl++GppGtGKTlla+a+a  +     +v+f+  +g+++lsk+vge+e+++r lf+eak+ + psi+f+DEid la+ rs+++++ + ++v++Ll+ +d
  EPX71462.1 317 VLFHGPPGTGKTLLARALAAACssedkKVSFYMRKGADCLSKWVGEAERQLRLLFEEAKSTQ-PSIIFFDEIDGLAPVRSSKQEQIHASIVSTLLALMD 414
                 79*******************955555599*******************************8.************************************ PP

                 HTTTSSSTEEEEEEESSGGGSTHHHHS.TTSSEEEETT CS
         AAA  95 gvkkkeskvivigatnrpdkldpallr.gRfdrkieie 131
                 g++ + ++vi+igatnrpd +dpal+r gRfdr+++++
  EPX71462.1 415 GMDGR-GQVIIIGATNRPDAVDPALRRpGRFDREFYFS 451
                 ****7.56***************************997 PP

  == domain 2  score: 24.3 bits;  conditional E-value: 5.5e-08
                 EEEESSTTSSHHHHHHHHHHHH.THEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTT CS
         AAA   1 vllyGppGtGKTllakavakel.gvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkk 98 
                 vl++G +G G  +l  av +   gv++ ++++s ll++  +  e +i +lf+e++++  ps++ i ++d+  +        +++++ + Ll+ ld  ++
  EPX71462.1 619 VLICGQKGLGQVSLGPAVLQYYeGVHVQSFDMSVLLQDSTQSIETSIIHLFTEVRRHT-PSVIYIPDVDSWLNVL----PPSASTTFSSLLERLDFSDQ 712
                 799******************956*********************************8.************8888....8889999******9997777 PP

                 SSSTEEEEEEESS.GGGSTHHH CS
         AAA  99 keskvivigatnr.pdkldpal 119
                     +++++++++  ++l p+l
  EPX71462.1 713 ----ILFLAISTSpRKDLHPQL 730
                 ....999999999445566665 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.5   0.0   8.8e-11   5.5e-08       7      37 ..     481     511 ..     478     525 .. 0.89

  Alignments for each domain:
  == domain 1  score: 32.5 bits;  conditional E-value: 8.8e-11
   AAA_lid_3   7 LAerTeGySGADlaalcreAallAlrrgike 37 
                 LAer++Gy GADl alc eAal+ ++r+ ++
  EPX71462.1 481 LAERSKGYGGADLRALCTEAALNSIKRTYPQ 511
                 9**************************8765 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.0   2.3e-08   1.4e-05       6     105 ..     317     415 ..     313     421 .. 0.85
   2 ?    3.0   0.0      0.16     1e+02       6      78 ..     619     686 ..     616     697 .. 0.91

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 2.3e-08
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTS...EEEEETGGG-------------HHHHHHHHH CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG...ivllDEidKihpkessgadvSregVqrdLLq 101
                 +l+ gp g+Gkt+la+ala   +  +e+k + + +++ +    +++ v + + +     + +++    i+++DEid  +p +ss+++  +  ++  LL 
  EPX71462.1 317 VLFHGPPGTGKTLLARALAAACS--SEDKKVSFYMRKGAD--CLSKWVGEAERQLRLLFEEAKSTqpsIIFFDEIDGLAPVRSSKQEQIHASIVSTLLA 411
                 689*******************8..578888888888877..66777777777777776666666888*************99999999999******* PP

                 HHH- CS
       AAA_2 102 ileg 105
                 +++g
  EPX71462.1 412 LMDG 415
                 **98 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.16
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTSEEEEETGG CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegGivllDEid 78 
                 +l++g++g G+  l  a+ ++ +     ++  +d+s ll+  ++ ++++  i+     v++    ++++ ++d
  EPX71462.1 619 VLICGQKGLGQVSLGPAVLQYYE---GVHVQSFDMSVLLQ--DSTQSIETSIIHLFTEVRRHTPSVIYIPDVD 686
                 68899999999999999999998...689***********..99**********9999999999999998887 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   0.0   9.1e-09   5.6e-06      49     130 ..     316     401 ..     306     412 .. 0.86

  Alignments for each domain:
  == domain 1  score: 26.2 bits;  conditional E-value: 9.1e-09
   IstB_IS21  49 nivllGpsGvGKshlaialgveavraglsvlfvr...vedLveelkrarrdgklaralkrllkvdllilDdl.gllpldqaeaell 130
                 ++++ Gp+G+GK+ la al+ +   ++++v+f+    ++ L + +  a+r+ +l  + ++ ++++++  D++ gl p+ + ++e++
  EPX71462.1 316 GVLFHGPPGTGKTLLARALAAACSSEDKKVSFYMrkgADCLSKWVGEAERQLRLLFEEAKSTQPSIIFFDEIdGLAPVRSSKQEQI 401
                 68999****************9999*****998623356688999**************************978888877776665 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.0   3.9e-08   2.4e-05      19     128 ..     309     414 ..     304     428 .. 0.63

  Alignments for each domain:
  == domain 1  score: 24.8 bits;  conditional E-value: 3.9e-08
      AAA_16  19 vrsgrpelvllsGesGvGKsslvrellralekd..ggiflrgkcdqlesaipysalaqalareellrqlldeaesaeleawrekleealaavpelagae 115
                  +++ p+ vl++G++G+GK+ l+r+l+ a + +  ++ f   k  ++     +s ++  + + + lr l +ea+s++++       + la+v++ + ++
  EPX71462.1 309 FNMQPPRGVLFHGPPGTGKTLLARALAAACSSEdkKVSFYMRKGADC-----LSKWVGEA-E-RQLRLLFEEAKSTQPSIIFFDEIDGLAPVRSSKQEQ 400
                 5566679********************75555565688866666666.....46688888.4.455666666666565555554455455444444444 PP

      AAA_16 116 a.srllellkrlla 128
                    ++  +l +l++
  EPX71462.1 401 IhASIVSTLLALMD 414
                 44555555555555 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   2.5e-06    0.0015       2      79 ..     317     392 ..     316     441 .. 0.67
   2 ?    0.7   0.1      0.77   4.8e+02      18      53 ..     961     996 ..     957    1007 .. 0.86

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 2.5e-06
                 EEEE--SSSSHHHHHHHGGGGB....S--EEEEE--TT--HHHHH--B--.........--------..G-SEEEEESGGG--H CS
       AAA_5   2 vlLvGppGtgKselaerlaaal....nreveyvqltrdtteedlkgrreikngttslvdsplvraar..egeilvlDEveraes 79 
                 vl  GppGtgK+ la+ laaa     ++  +y+  ++    +d + ++    g+++++   l ++a+  +++i+++DE++ + +
  EPX71462.1 317 VLFHGPPGTGKTLLARALAAACssedKKVSFYM--RK---GADCLSKWV---GEAERQLRLLFEEAKstQPSIIFFDEIDGLAP 392
                 8999******************76433333333..33...356666777...78888888888888888888999999986554 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.77
                 HGGGGBS--EEEEE--TT--HHHHH--B--...... CS
       AAA_5  18 rlaaalnreveyvqltrdtteedlkgrreikngtts 53 
                 +l++ l ++  ++ql++d +e+++  + ei+++t++
  EPX71462.1 961 KLKKHLDATKATMQLPEDQQEQKMEDSAEINDSTEE 996
                 5788899999*******************9766654 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.1   8.7e-05     0.054       9      31 ..     318     340 ..     312     433 .. 0.70
   2 ?   -1.5   0.0       4.6   2.8e+03      79     118 ..     567     609 ..     515     630 .. 0.67
   3 ?   -1.6   0.0         5   3.1e+03      25      70 ..     730     767 ..     723     813 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 8.7e-05
      AAA_22   9 vvtGesGtGKTtllrrlleqlde 31 
                 + +G++GtGKT+l+r l+     
  EPX71462.1 318 LFHGPPGTGKTLLARALAAACSS 340
                 789**************988644 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 4.6
      AAA_22  79 lealeqalrarav..ielliiDEaqhlr.seealeeLrsllnl 118
                 l+++  +l++++   +++ i+DE+ + +  e+ +e+  +l  +
  EPX71462.1 567 LNRILSYLSKHMPipPKVNILDEVMYDDpGEDDFEYQQKLDQF 609
                 4666666777776788888888887776533333333333333 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 5
      AAA_22  25 lleqldeeakaeeerpevvfvtlpsstsskdllrellralglelka 70 
                 l+e++        ++ +v++ + ps  + +++++ +   +  +  +
  EPX71462.1 730 LKEWF--------PKQSVIELQYPSRDKIENFFQPIIDLIRTSPQK 767
                 33444........599999***************999988876666 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   8.1e-06     0.005       1      41 [.     317     354 ..     317     390 .. 0.75

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 8.1e-06
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkklklkkkdsvysrnped 41 
                   ++++Gp+g+GK++la+ La+a +    ++kk s+y+r+ +d
    EPX71462.1 317 VLFHGPPGTGKTLLARALAAACS---SEDKKVSFYMRKGAD 354
                   689****************9999...678899999965433 PP

>> Bromodomain  Bromodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   8.5e-06    0.0052      36      76 ..     877     917 ..     873     923 .. 0.90

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 8.5e-06
                  ---HHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHSHTTS CS
  Bromodomain  36 PldLstIkkklesnkYksladfeadlkllfsNarkyngegs 76 
                   ++L++I+k++ +n Y ++ df  d+kl++  a +  ++++
   EPX71462.1 877 MMSLEEIEKRVWDNCYWTPRDFVRDIKLILRDALRLGESET 917
                  69******************************999877665 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   2.7e-05     0.017       2      23 ..     317     338 ..     317     460 .. 0.87
   2 ?   -2.6   0.2       9.3   5.7e+03     113     143 .]     945     976 ..     921     976 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 2.7e-05
      AAA_33   2 vllvGlpGsGKstlaerllkkl 23 
                 vl++G+pG+GK+ la+ l+++ 
  EPX71462.1 317 VLFHGPPGTGKTLLARALAAAC 338
                 79***************99765 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 9.3
      AAA_33 113 eRlakRaang.ddrsevpeealdrqkarferp 143
                 eR a+R++++ + r +  +++ld+ ka++++p
  EPX71462.1 945 ERMAVREEERrQLRENKLKKHLDATKATMQLP 976
                 67788888764556677778888888887765 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.0   0.00069      0.42      23      52 ..     315     344 ..     304     358 .. 0.80
   2 ?   -0.9   0.0       1.8   1.1e+03      93     143 ..     378     430 ..     361     454 .. 0.57
   3 ?    1.9   0.0      0.25   1.6e+02       8      40 ..     602     634 ..     597     650 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00069
                      S-EEEECSTTSSHHHHHHHHHHHSTTTTS- CS
  Sigma54_activat  23 lsvlitGesGtGKellaraiheaskrkekp 52 
                        vl +G  GtGK+llara+ +a + ++k+
       EPX71462.1 315 RGVLFHGPPGTGKTLLARALAAACSSEDKK 344
                      569*****************9966655553 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 1.8
                      TTSEEEEETGGGS-H...HHHHHHHHHHHHSEEESBTSSSEEE--EEEEEEESS CS
  Sigma54_activat  93 dgGtlfLDeigelpl...elQekLlrvlqegevervGsskeikvdvriiaatne 143
                      + +++f+Dei  l +   + Qe++   + +  +  + +    + +v ii atn+
       EPX71462.1 378 QPSIIFFDEIDGLAPvrsSKQEQIHASIVSTLLALMDG-MDGRGQVIIIGATNR 430
                      45789999998876422245666666655544444433.333455666666665 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.25
                      HHHHHHHHHHHCTSSS-EEEECSTTSSHHHHHH CS
  Sigma54_activat   8 lkelleqikkvaktdlsvlitGesGtGKellar 40 
                       ++ l+q +k+  ++ +vli G++G G   l  
       EPX71462.1 602 YQQKLDQFEKLRIYKPRVLICGQKGLGQVSLGP 634
                      6788999999999**************876655 PP

>> Sigma54_activ_2  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.0    0.0034       2.1      24      71 ..     317     366 ..     310     408 .. 0.65
   2 ?    5.0   0.0      0.04        25      12      80 ..     607     687 ..     602     725 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0034
                      EEEEEETT--HHHHHHCC--TTS-EE-..-SSTTHHHH-HHHHHHHTTTS CS
  Sigma54_activ_2  24 vfltGekGsgkelvArlLhknsgpwle..ifvverlaklpldlleqakgg 71 
                      v+  G++G+gk+l Ar+L+   +  ++   f + ++a+  ++++ +a+ +
       EPX71462.1 317 VLFHGPPGTGKTLLARALAAACSSEDKkvSFYMRKGADCLSKWVGEAERQ 366
                      8999**************87644433311456777777776666665332 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.04
                      HHHHHHHT-SS-EEEEEETT--HHHHH.HCC--TTS-EE--SSTTHHHH-HHHHHHHT...........TTSEEEEEE-TT CS
  Sigma54_activ_2  12 erLeqaaqsklpvfltGekGsgkelvA.rlLhknsgpwleifvverlaklpldlleqa...........kggtLylkdiad 80 
                      ++ e+++  k  v++ G+kG+g+ +    +L+  +g  ++ f++  l +   +++e++           ++ ++y++d+++
       EPX71462.1 607 DQFEKLRIYKPRVLICGQKGLGQVSLGpAVLQYYEGVHVQSFDMSVLLQDSTQSIETSiihlftevrrhTPSVIYIPDVDS 687
                      578999999************987765267889999999999998888766555665223444444555888999999875 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   0.00011     0.066       1      40 [.     317     357 ..     317     390 .. 0.79
   2 ?   -0.7   0.0       3.2     2e+03      15      66 ..     571     626 ..     569     653 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 0.00011
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf.gvnlrdvakengllle 40 
                 +l  G+pG+GKt la++L+  + +   +++++ +++  +l+
  EPX71462.1 317 VLFHGPPGTGKTLLARALAAACSSeDKKVSFYMRKGADCLS 357
                 5778**************99986577777777777655544 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 3.2
      AAA_18  15 akeLskrlgf..gvnlrdvakenglllevdpe..aldeskrldedkldklldalee 66 
                   +Lsk++ +   vn+ d +  +++ ++++++  +ld++++l++ k  +l+ + ++
  EPX71462.1 571 LSYLSKHMPIppKVNILDEVMYDDPGEDDFEYqqKLDQFEKLRIYKPRVLICGQKG 626
                 57899998889999999999999999999999999999999988887777776666 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   8.4e-05     0.052       5      41 ..     318     353 ..     315     402 .. 0.81
   2 ?   -1.8   0.2       2.3   1.4e+03     106     146 ..     952     992 ..     942    1010 .. 0.72
   3 ?   -1.2   0.3       1.5   9.4e+02      56     122 ..    1066    1136 ..    1037    1145 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 8.4e-05
     DUF2075   5 lVtGvaGtGKtvvllnllaeleddeeertavylsvNh 41 
                 l +G +GtGKt+++ +l+a++ ++e+++ + y+ +  
  EPX71462.1 318 LFHGPPGTGKTLLARALAAAC-SSEDKKVSFYMRKGA 353
                 668******************.666667676666555 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 2.3
     DUF2075 106 qaekqseenqlkelmkrakvvvalvDegQelntgeigteee 146
                  + +q  en lk+ +++ k ++ l  ++Qe ++++ +++++
  EPX71462.1 952 EERRQLRENKLKKHLDATKATMQLPEDQQEQKMEDSAEIND 992
                 34455678889999999999999999998888888776665 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 1.5
     DUF2075   56 ekkkkkeafeklssfinnlsef.....kkaeekkeepkedvvivDEAhrlltksdqaekqseenqlkelmkr 122 
                  ++ +  ++f+k++ f +  ++      ++ e++ ee+k+  ++ DE  +l+  +d + ++se+  ++el++ 
  EPX71462.1 1066 SNGTSAKNFSKPNGFTEHNDNVmhdekSEVEDTYEEEKLPELVLDERKLLNL-KDLFLDRSEDLTVEELVQL 1136
                  566677788888888888777677766677778888999999****988888.8888999998888888765 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   0.00018      0.11       3      42 ..     317     351 ..     315     418 .. 0.84
   2 ?   -1.4   0.0       3.1   1.9e+03     104     144 ..     695     739 ..     667     755 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00018
                 EEEEC-TTTCHHHHHHHHHHHHCTS-SCCCC-SEEEEEET CS
       NACHT   3 vilqGeaGsGKTtLlqklalawaegklpqgafklvFflsl 42 
                 v+ +G++G GKT L++ la a  +++      k++F+++ 
  EPX71462.1 317 VLFHGPPGTGKTLLARALAAACSSED-----KKVSFYMRK 351
                 789***************99988877.....267777765 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 3.1
                 .....HHHHHCTTTTT--EEEEEEECCCHHHHCTTSSCE...... CS
       NACHT 104 pvrtlLselirkkllpeasllltvrpralrdleeqleea....iv 144
                 ++ t +s+l+++  ++   l+l+++++ ++dl+ ql+e      v
  EPX71462.1 695 SASTTFSSLLERLDFSDQILFLAISTSPRKDLHPQLKEWfpkqSV 739
                 567788899999889999999999999999988888765444344 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   8.5e-05     0.053      19      51 ..     315     347 ..     304     390 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 8.5e-05
      AAA_30  19 rvavltGpAGtGKttalkalreaweaaggrvig 51 
                 r ++ +Gp+GtGKt + +al++a  ++ ++v  
  EPX71462.1 315 RGVLFHGPPGTGKTLLARALAAACSSEDKKVSF 347
                 557889*******************99988865 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   0.00024      0.15       6      80 ..     309     396 ..     307     426 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00024
                 EEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGG...B-HHHCCHCEEEE-SS.--S-TTSBHHHH.........H CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxx.xxxxxxxxxxxx.........x RF
    ABC_tran   6 lklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlke...qeleslrkeigvlpqe.pqlfpeltvren.........e 80 
                 +++++ + v + G+ G+GK+ L+++la   + +  ++ + +++  +   +   +++++++ l++e ++ +p +   ++          
  EPX71462.1 309 FNMQPPRGVLFHGPPGTGKTLLARALAAACSSEDKKVSFYMRKGADclsKWVGEAERQLRLLFEEaKSTQPSIIFFDEidglapvrsS 396
                 67778888999**************************776555555555999999999999999977777777666656777776543 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   8.7e-05     0.054      25      45 ..     317     337 ..     314     356 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 8.7e-05
  Mg_chelatase  25 lllvGppGsGKtmlakrlpsl 45 
                   +l+ GppG+GKt+la++l++ 
    EPX71462.1 317 VLFHGPPGTGKTLLARALAAA 337
                   799*************99875 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00024      0.15      35      64 ..     316     345 ..     309     405 .. 0.80
   2 ?   -2.5   0.0       6.1   3.8e+03      36      51 ..     619     634 ..     616     653 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00024
      RuvB_N  35 hvllyGpPGlGkttlakiiakelgvklkit 64 
                  vl++GpPG Gkt la+ +a+   ++ k  
  EPX71462.1 316 GVLFHGPPGTGKTLLARALAAACSSEDKKV 345
                 59***************9998776665544 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 6.1
      RuvB_N  36 vllyGpPGlGkttlak 51 
                 vl++G  GlG+ +l  
  EPX71462.1 619 VLICGQKGLGQVSLGP 634
                 89*********99965 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00027      0.17       5      99 ..     317     426 ..     314     445 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00027
      AAA_14   5 lvitGaRrvGKTtllkqlikell.vkkesilyinldderdkk.ladpekllelileklkeekktylflDEiqev............pewekalkslvd. 88 
                 ++  G+  +GKT l++ l+      +k+  +y+    + ++k   + e+ l+l++e++k+ + +++f+DEi  +             ++ ++l  l+d 
  EPX71462.1 317 VLFHGPPGTGKTLLARALAAACSsEDKKVSFYMRKGADCLSKwVGEAERQLRLLFEEAKSTQPSIIFFDEIDGLapvrsskqeqihASIVSTLLALMDg 415
                 56789999**********988875555555555544444433133444566777777656699********9886666666666666666666666664 PP

      AAA_14  89 .egknldvivtG 99 
                  +g +++vi+ G
  EPX71462.1 416 mDG-RGQVIIIG 426
                 333.56666666 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00027      0.17       2      22 ..     317     337 ..     316     376 .. 0.85
   2 ?   -0.9   1.2       2.7   1.7e+03      51     142 ..     867     958 ..     832     992 .. 0.54

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00027
      AAA_28   2 ivitGgestGKTtlleaLaar 22 
                 + + G+++tGKT l++aLaa 
  EPX71462.1 317 VLFHGPPGTGKTLLARALAAA 337
                 6799***************75 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 2.7
      AAA_28  51 dllafaervleeqleeeaaaaankvlfcDrglldtlaYaraygge.aeaeleaaarekrydlvfllppap..eidddgeRredleereaiderlr 142
                 ++++ ++r+  + lee +++  +++++  r+++  +  + ++  +  e e+++ a+e+  +  + l+ +    +++  eR   ++ re+  ++lr
  EPX71462.1 867 RKIDTNQRFSMMSLEEIEKRVWDNCYWTPRDFVRDIKLILRDALRlGESETVKRAQEMYANVLLGLEDMDdeQFSQRCER---MAVREEERRQLR 958
                 56666666666666666666666666666666655555555444434444544444444444444554442222333333...333333222222 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00018      0.11      51      94 ..     315     361 ..     304     371 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00018
                 XXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXX CS
       TIP49  51 ravLlaGpsgtGktalaiaiskelg...edvpfvalsgsevyslevk 94 
                 r+vL+ Gp+gtGkt la a++ + +   ++v f + +g++  s  v 
  EPX71462.1 315 RGVLFHGPPGTGKTLLARALAAACSsedKKVSFYMRKGADCLSKWVG 361
                 89************999999988775457899998888888776665 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0    0.0003      0.18      37      60 ..     318     342 ..     315     425 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.0003
      AAA_25  37 llaGapgtGKttlaldlalava.tG 60 
                 l+ G+pgtGKt la  la+a++ ++
  EPX71462.1 318 LFHGPPGTGKTLLARALAAACSsED 342
                 789*****************99433 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00023      0.14      22      47 ..     317     342 ..     308     361 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00023
                 EEEE--TTSSTTHHHHHHHHHHHHTT CS
        PhoH  22 vfaiGpaGtGKtylavalavealkkk 47 
                 v   Gp GtGKt+la ala++  +++
  EPX71462.1 317 VLFHGPPGTGKTLLARALAAACSSED 342
                 5678**************99887664 PP

>> Parvo_NS1  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00024      0.15     116     138 ..     316     338 ..     304     341 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00024
   Parvo_NS1 116 tvwfyGpantGktnlaeaIakav 138
                  v+f+Gp+ tGkt la+a+a a+
  EPX71462.1 316 GVLFHGPPGTGKTLLARALAAAC 338
                 589*****************997 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0    0.0006      0.37      32      62 ..     313     343 ..     303     353 .. 0.80
   2 ?   -2.2   0.0         4   2.5e+03      33      80 ..     616     663 ..     609     676 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.0006
       AAA_7  32 nkkpvllvGptGtGKtviikdllkkldkeky 62 
                   + vl+ Gp GtGKt++++ l  ++++e+ 
  EPX71462.1 313 PPRGVLFHGPPGTGKTLLARALAAACSSEDK 343
                 55789***************99888886654 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 4
       AAA_7  33 kkpvllvGptGtGKtviikdllkkldkekylsltinfsaqtsanqlqd 80 
                 k  vl++G++G G  ++   +l+ ++  +++s  +++  q s +++ +
  EPX71462.1 616 KPRVLICGQKGLGQVSLGPAVLQYYEGVHVQSFDMSVLLQDSTQSIET 663
                 5679*********99988888888887777777777666666666555 PP

>> PIF1  PIF1-like helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   0.00048      0.29      12      54 ..     304     346 ..     300     356 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00048
                 HH......HCTS-EEEEESTTSSCHHHHHHHHHHCHCTCCCEE CS
        PIF1  12 aiieavlnekgklfFvtGsgGtgKtflwkallkklrsegkivl 54 
                 +i ++ + + ++ + ++G  GtgKt l +al +++ se+k+v 
  EPX71462.1 304 EIFQTFNMQPPRGVLFHGPPGTGKTLLARALAAACSSEDKKVS 346
                 6777777788899999**********************99985 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00067      0.41      20      41 ..     317     338 ..     306     379 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00067
      AAA_11  20 tliqGPPGtgKTktivellsql 41 
                 +l++GPPGtgKT    +l ++ 
  EPX71462.1 317 VLFHGPPGTGKTLLARALAAAC 338
                 799*********8887777766 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0    0.0016      0.97      22      84 ..     317     376 ..     305     417 .. 0.72
   2 ?   -0.9   2.8       3.2     2e+03     153     185 ..     923     990 ..     792    1001 .. 0.51

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.0016
      AAA_23  22 tlItGpNGaGKTTildAiklaLygetprlsrksgrgfeksdveiesegkvkayveltfenkdg 84 
                 +l++Gp G+GKT + +A+  a+  e ++ s       + +d+  +  g+ +++++l fe  + 
  EPX71462.1 317 VLFHGPPGTGKTLLARALAAACSSEDKKVS---FYMRKGADCLSKWVGEAERQLRLLFEEAKS 376
                 49********************99754433...333344555444447777777777776665 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 3.2
      AAA_23 153 e..................................rleelekeleeledekkllekl.eqekekekel 185
                 e                                  r ++l+k l+  +++ +l e++ eq+ e  +e+
  EPX71462.1 923 EmyanvllgledmddeqfsqrcermavreeerrqlRENKLKKHLDATKATMQLPEDQqEQKMEDSAEI 990
                 03333333222222222333333333333332222444455555555555555554433444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1176 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1198  (0.0668191); expected 358.6 (0.02)
Passed bias filter:                      527  (0.0293937); expected 358.6 (0.02)
Passed Vit filter:                        91  (0.00507558); expected 17.9 (0.001)
Passed Fwd filter:                        32  (0.00178482); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              29  [number of targets reported over threshold]
# CPU time: 0.93u 0.35s 00:00:01.28 Elapsed: 00:00:00.48
# Mc/sec: 7410.88
//
Query:       EPX71463.1  [L=263]
Description: ubiquitin family [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.6e-45  153.1   2.2    1.1e-44  152.2   2.2    1.4  1  Sde2_N_Ubi  Silencing defective 2 N-terminal ubiquitin domain


Domain annotation for each model (and alignments):
>> Sde2_N_Ubi  Silencing defective 2 N-terminal ubiquitin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.2   2.2   5.9e-49   1.1e-44       7     161 ..       7     157 ..       4     160 .. 0.95

  Alignments for each domain:
  == domain 1  score: 152.2 bits;  conditional E-value: 5.9e-49
  Sde2_N_Ubi   7 sfdgltlpstlsltlpstatvsdlvdklserlpeslkesliLttvsnkqlllssdvslssllassadsellslrllvrlrGGKGGFGSqLRaaggrmss 105
                 +f+g+  ++ ++++l+  +t+++++ +   + +e l +s++Lt+ s+   ++s ++s++sl a+ ++   ++l l  rl+GGKGGFGSqLRaaggrms+
  EPX71463.1   7 FFNGFPSKKVVQVHLNAYSTLEQALVQAFGKEAERLLSSFYLTHESR---IVSPSTSICSLEANVSK-PDVNLYLQGRLLGGKGGFGSQLRAAGGRMSK 101
                 4778888899*************9999999999999999********...899**********9999.99***************************** PP

  Sde2_N_Ubi 106 kkksnenndscRdldGrRLrtvkeakalaeylaekperekkekearrkrleavvea 161
                 k++++en+dscRdldG+RL+tv+eak+l+eyla+kp +++++ke+++++l++++++
  EPX71463.1 102 KRNEQENQDSCRDLDGNRLGTVREAKELSEYLAKKPSESRARKEEKKQKLKKLLST 157
                 **************************************************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2055  (0.114619); expected 358.6 (0.02)
Passed bias filter:                      710  (0.0396006); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 1807.72
//
Query:       EPX71464.1  [L=143]
Description: 40S ribosomal protein S10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.3e-44  147.8   0.1    8.7e-44  147.5   0.1    1.1  1  S10_plectin  Plectin/S10 domain
  ------ inclusion threshold ------
      0.075   13.5   0.0       0.15   12.5   0.0    1.5  1  RlmM_FDX     RlmM ferredoxin-like domain


Domain annotation for each model (and alignments):
>> S10_plectin  Plectin/S10 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.5   0.1   9.7e-48   8.7e-44       1      92 [.       3      94 ..       3      95 .. 0.99

  Alignments for each domain:
  == domain 1  score: 147.5 bits;  conditional E-value: 9.7e-48
                 --HCHHHHHHHHCCCCSCEEEE--SS----SSS---HHHHHHHHHHCCCCTSEEEEEETTEEEEEE-HHHHHHHHHHHXXXXSXHHHHHXXX CS
  S10_plectin  1 ipkknrkaiyeylfkegvlvakkdfelkkheelnvpnlqvikalqSLksrgyvkeqfaWrhyYytLtneGieylreylhlpeeivPatlkks 92
                 ipk+nrkai+++lf++gvlvakkdf+l+kh+e++vpnlqvika+qSL srgy+k++++W ++YytL+neG+eylreylhlp+e+vPat+k++
   EPX71464.1  3 IPKENRKAIHQTLFQQGVLVAKKDFNLPKHPEVGVPNLQVIKACQSLDSRGYIKTRYNWGYFYYTLNNEGVEYLREYLHLPAEVVPATHKRQ 94
                 89***************************************************************************************986 PP

>> RlmM_FDX  RlmM ferredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.7e-05      0.15      23      61 ..      45      82 ..      41      89 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.7e-05
    RlmM_FDX 23 kaaelevaGyvkakknsgyvlfeleeaeaaeellkkldl 61
                 +++l+  Gy+k++ n gy  ++l ++e +e l + l+l
  EPX71464.1 45 ACQSLDSRGYIKTRYNWGYFYYTL-NNEGVEYLREYLHL 82
                56788899****************.78999999888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       354  (0.0197445); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.27s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 1004.54
//
Query:       EPX71465.1  [L=236]
Description: dolichol-phosphate mannosyltransferase catalytic subunit Dpm1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.6e-35  119.9   0.0    1.2e-34  119.6   0.0    1.1  1  Glycos_transf_2  Glycosyl transferase family 2
    1.5e-13   51.1   0.0      2e-13   50.8   0.0    1.1  1  Glyco_tranf_2_3  Glycosyltransferase like family 2
    1.5e-05   24.6   0.0    2.1e-05   24.1   0.0    1.2  1  Glyco_transf_21  Glycosyl transferase family 21
      0.002   17.6   0.0     0.0027   17.2   0.0    1.2  1  Glyco_tranf_2_2  Glycosyltransferase like family 2
  ------ inclusion threshold ------
       0.16   12.5   0.0       0.48   11.0   0.0    1.8  1  Glyco_tranf_2_4  Glycosyl transferase family 2


Domain annotation for each model (and alignments):
>> Glycos_transf_2  Glycosyl transferase family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.6   0.0   3.4e-38   1.2e-34       1     168 [.       5     174 ..       5     176 .. 0.97

  Alignments for each domain:
  == domain 1  score: 119.6 bits;  conditional E-value: 3.4e-38
                      EEEEEESS-...TTTHHHHHHHHHHHGGCCEEEEEEEEES-SSCHHHHHGGGCH..C-TTEEEEEESSS-HHHHHHHHHHHH--SSEEEEEESS CS
  Glycos_transf_2   1 svviptyNe...ektlletlesllaqdpypdfeiivvDDgStDetveileelak..edprvrvirreenvGkagalnaglraatgdyilflDaD 89 
                      sv  ptyNe    + +  ++++  +q   + +ei+v+DD+S+D+t+e+++el++  +++r+ +  r  + G+++a+ +gl+ atgd+++++DaD
       EPX71465.1   5 SVLLPTYNEkrnLPIITYLIARTFEQ-ANLSWEIVVIDDASPDGTQEVAKELQRiyGEERILLKPRAGKLGLGTAYIHGLKSATGDFVIIMDAD 97 
                      899******99999999999999999.****************************************999************************ PP

                      EEE-TTHHHHHHHHHHH.TTCEEEEEEEEEECCCCCCCHC-SSEEEECCHCCCCHCCCCCCSTTCSTCCCEEEEHHHHH CS
  Glycos_transf_2  90 depdpdwleklvealekdgadvvlgqrprifgetdeiernkrvgenerlyfkerkrslkgnlsfeigsaallrrealee 168
                        ++p++l+++++  +++++d+vlg+r++++g+ + ++  ++    +r+ +      l+ ++s+++gs++l+++ +le 
       EPX71465.1  98 FSHHPKYLPEFIKLQKEGNYDIVLGTRYAKDGGVYGWNLKRK--LISRGANLLASTVLGTGVSDVTGSFRLYKKHVLET 174
                      **************************************9987..8*******************************986 PP

>> Glyco_tranf_2_3  Glycosyltransferase like family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.8   0.0   5.5e-17     2e-13       4     204 ..       4     204 ..       2     217 .. 0.83

  Alignments for each domain:
  == domain 1  score: 50.8 bits;  conditional E-value: 5.5e-17
  Glyco_tranf_2_3   4 lavlVptfneed...vlgevlesllaqeyprvevvvvvdesdaetlevaeelaaalpdvrvrvvvnarnlgstgksralnealravksdlvllv 94 
                      ++vl pt+ne +    ++ +++ +  q++ + e+vv++d s ++t eva+el+++++ +r  ++ ++r  g+ g  +a+ ++l+ +++d+v+++
       EPX71465.1   4 YSVLLPTYNEKRnlpIITYLIARTFEQANLSWEIVVIDDASPDGTQEVAKELQRIYGEER--ILLKPRA-GKLGLGTAYIHGLKSATGDFVIIM 94 
                      799*******997767777899999999999***************************95..6667774.556788899*************** PP

  Glyco_tranf_2_3  95 DdDtvvePdtlkrllqffltpkvgavgtpvfllnrstlvsalgalefaerhlrflaarralg.vltlnGsgslirrevlkelegldplflltdD 187
                      D+D   +P +l+ +  + +  ++++v + ++++ +  +   l + ++  r ++ la +  ++ v  ++Gs+ l+  +vl+ l++   ++  +  
       EPX71465.1  95 DADFSHHPKYLPEFIKLQKEGNYDIVLGTRYAKDGGVYGWNLKR-KLISRGANLLASTVLGTgVSDVTGSFRLYKKHVLETLMKEITSKGYVFQ 187
                      *************99998777************99977555655.67789998888887775599****************9654444555566 PP

  Glyco_tranf_2_3 188 yelglrlrragfrtayv 204
                       e+  r+r++++ +  v
       EPX71465.1 188 MEMIARARQHNYSIGEV 204
                      67777777777766555 PP

>> Glyco_transf_21  Glycosyl transferase family 21
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.0   5.9e-09   2.1e-05      22     116 ..      79     175 ..      56     181 .. 0.92

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 5.9e-09
  Glyco_transf_21  22 llqaleaakydllvisDsdvrvkpdyLeellaaledpkvglVtslpvgsdakglaaaleaaflntlagvlqakl..sglgfavGksmalrreaL 113
                       +++l++a  d+++i D+d    p+yL e+ +  ++ +  +V ++ ++ d    + +l++ +++ +a++l++++   g++ ++G++ ++++++L
       EPX71465.1  79 YIHGLKSATGDFVIIMDADFSHHPKYLPEFIKLQKEGNYDIVLGTRYAKDGGVYGWNLKRKLISRGANLLASTVlgTGVSDVTGSFRLYKKHVL 172
                      5789999**********************************************99*****************4434599**************9 PP

  Glyco_transf_21 114 eai 116
                      e +
       EPX71465.1 173 ETL 175
                      975 PP

>> Glyco_tranf_2_2  Glycosyltransferase like family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   7.6e-07    0.0027       1     104 [.       5     110 ..       5     125 .. 0.79

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 7.6e-07
  Glyco_tranf_2_2   1 svviplraseerhyieervlqkakyy.deeielivvddgSsekfleevssiidlnllvylkdeddk.ayslaaarNrGaskaesdlvlFlDaDc 92 
                      sv++p ++++++  i   +  +++   +   e++v+dd S++ + e+ + +    ++  +  ++     +l+ a   G + a +d+v+ +DaD 
       EPX71465.1   5 SVLLPTYNEKRNLPIITYLIARTFEQaNLSWEIVVIDDASPDGTQEVAKELQRIYGEERILLKPRAgKLGLGTAYIHGLKSATGDFVIIMDADF 98 
                      6889999999886666666555544337789************99999999988877755555555599************************8 PP

  Glyco_tranf_2_2  93 fissDkfekilk 104
                         +  +   +k
       EPX71465.1  99 SHHPKYLPEFIK 110
                      777766666666 PP

>> Glyco_tranf_2_4  Glycosyl transferase family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00013      0.48      21      81 ..      36      97 ..      18     109 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00013
  Glyco_tranf_2_4 21 rilvydndstDgtrailkelpevk...llhvdksyederrqvellkallaryaeadwvlvvDaD 81
                     +i+v+d+ s Dgt ++ kel+++     +  +    +   + ++++ l    a +d+v+ +DaD
       EPX71465.1 36 EIVVIDDASPDGTQEVAKELQRIYgeeRILLKPRAGKLGLGTAYIHGLKS--ATGDFVIIMDAD 97
                     79*****************9885433322233333334455555555553..367888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (236 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       470  (0.0262145); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 1653.55
//
Query:       EPX71466.1  [L=965]
Description: phosphatidylserine decarboxylase Psd3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.3e-59  198.9   0.0    1.2e-58  198.0   0.0    1.5  1  PS_Dcarbxylase  Phosphatidylserine decarboxylase
    5.1e-17   62.0   0.4    2.7e-15   56.5   0.0    3.1  3  C2              C2 domain


Domain annotation for each model (and alignments):
>> PS_Dcarbxylase  Phosphatidylserine decarboxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  198.0   0.0   1.3e-62   1.2e-58       1     199 [.     743     953 ..     743     954 .. 0.93

  Alignments for each domain:
  == domain 1  score: 198.0 bits;  conditional E-value: 1.3e-62
  PS_Dcarbxylase   1 lneffvrklkdgaRpi..dddpgaivsPaDgrilqigeieegsviqvKgityslrdLlgeasessadsfkngyfvviyLspgdyHryhaPvsgkv 93 
                     +neff+r+lk+gaRp+  ++d++ +vs aD+r++ + +i++ +++++Kg+++s++ Llg + e++a+++++g++++++L+p+dyHr+h+P +gkv
      EPX71466.1 743 FNEFFYRRLKPGARPLasPEDSNILVSAADSRLTVYDKISSARTYWIKGSEFSVARLLGPEYEKEASQYTEGSICIFRLAPQDYHRFHSPLDGKV 837
                     8***************76666667*********************************************************************** PP

  PS_Dcarbxylase  94 eerrhipGellsvnpsalkelrglftlneRvvlview..kGkvavvpvGatnvgsivlnvlkgdelkkGeelGyFqf.GStvvlvfeag...... 179
                      +   i+G++++vnp+a++++ +++ +n R+v+ ie+  +G+v++v +Ga++vgsi+ +v++g+e+++G+elGyF++ GSt+v++++++      
      EPX71466.1 838 GKLSAIDGQYYTVNPMAVRSSLDVLGENARTVMPIESpqFGRVMYVCIGAMMVGSIQHTVGEGQEVRRGDELGYFKYgGSTIVMFLKENqvifdd 932
                     ************************************5569***********************************************88775433 PP

  PS_Dcarbxylase 180 kfieslvekgq.kvkmGeklg 199
                     +  +s+ve  +  ++mGe +g
      EPX71466.1 933 DILQSSVETTEtLIRMGENIG 953
                     33377777777899****998 PP

>> C2  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0      0.04   3.6e+02      12      91 ..      38     118 ..      23     131 .. 0.59
   2 !   56.5   0.0     3e-19   2.7e-15       5      93 ..     274     366 ..     271     380 .. 0.84
   3 ?   -0.9   0.0      0.22     2e+03       7      31 ..     650     683 ..     644     697 .. 0.65

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.04
                 SSSSSSTTSSCEEEEEEEE....ECEEEEEE-.SC.SSSSSSEEEEEEEEEESCHTTSEEEEEEEEECSS.STEEEEEEEEEEGHHH CS
          C2  12 nLpnkdkkgssdpyvkvsl....dgkqkakTr.vi.knslnPvWnekftfevaeleeakLeveVfdndrl.skddfiGkveiplstl 91 
                  Lp+   ++ s  y+k+++    +  + ++T+ ++ +nsl      +++++++    + Le+++  +++  +++  +G+  i+l++l
  EPX71466.1  38 ALPDTTSENDSCLYIKLKYkkyrAVIENVQTNkIVnNNSL-----MTLNMPLPT-DYQDLEFHLCFSCKQkRRKYTLGESLIRLDHL 118
                 4455555677888999999655544455555522222222.....455555565.78888888877666424444899999999983 PP

  == domain 2  score: 56.5 bits;  conditional E-value: 3e-19
                 EEEEEEESSSSS.STTSS...CEEEEEEEEECEEEEEE-SCSSSSSSEEEEEEEEEESC.HTTSEEEEEEEEECSSSTEEEEEEEEEEGHHHHT CS
          C2   5 vtvieAknLpnk.dkkgs...sdpyvkvsldgkqkakTrviknslnPvWnekftfevae.leeakLeveVfdndrlskddfiGkveiplstlls 93 
                 v++ +  nLp+  +++ +   +dp+v +s+ +k++++T+ ++ +lnPv+n+kf fev   +++  + ++V d+d++s +d +G ++++++++ +
  EPX71466.1 274 VEIDSISNLPPLkNVFHTgfdMDPFVIMSF-SKNTFRTKRVRHNLNPVYNQKFLFEVGTlEKNYDIIFKVIDHDKISLNDSVGACSVDIQSIIN 366
                 567778899555145333445*********.********99*************************************************9433 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.22
                 EEEEESSSSSST.....TSSCEEEEEEEE....E CS
          C2   7 vieAknLpnkdk.....kgssdpyvkvsl....d 31 
                  ++Ak L ++ k     ++++++yv+v +    +
  EPX71466.1 650 STSAKTLVRNRKtgqivEEKMNAYVRVGIrllyR 683
                 56788885554535556777******98855551 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (965 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       759  (0.0423336); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.73u 0.30s 00:00:01.03 Elapsed: 00:00:00.46
# Mc/sec: 6324.85
//
Query:       EPX71467.1  [L=389]
Description: glycine decarboxylase T subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-86  288.8   0.0    3.9e-86  288.6   0.0    1.1  1  GCV_T     Aminomethyltransferase folate-binding domain
    2.2e-22   78.7   0.1    4.1e-22   77.9   0.1    1.5  1  GCV_T_C   Glycine cleavage T-protein C-terminal barrel domain


Domain annotation for each model (and alignments):
>> GCV_T  Aminomethyltransferase folate-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  288.6   0.0   4.4e-90   3.9e-86       1     256 [.      29     279 ..      29     280 .. 0.97

  Alignments for each domain:
  == domain 1  score: 288.6 bits;  conditional E-value: 4.4e-90
       GCV_T   1 lydrhkalgakfvefagwemPvqYasesikaehlavreaaglfDvShmgkievsGpdaaalLqrlltndisklkpgkatytlllnedGgvidDlivarl 99 
                 lyd+h+++ga++v+fag++mP+qY++++i a+h+++re++glfDvShm ++ ++G++a+a+L++++++++++l+p ++t+++++ne+Gg+idD+i+a++
  EPX71467.1  29 LYDLHVNAGATIVPFAGFSMPLQYKDQTISASHRWTREHSGLFDVSHMVQWFIRGENATAYLESITPSSLKELAPFHSTLSAFTNEQGGIIDDTIIAKH 127
                 79************************************************************************************************* PP

       GCV_T 100 dedefllvvnaankekdlawlekaaekkdldvevedvteelallalqGPkarevlskll.gadlselkffsfaevelaggkkvlvsRtgytGedGfeiy 197
                 d++++++v+naa++ kd a l+++ e + + ve+e+v++ +al+a+qGP+ + v++ l  + d+s lkf ++a v+++ g+++lvsR gytGedGfei+
  EPX71467.1 128 DDNTYYVVTNAACSVKDEANLKSHLE-NWKGVELERVQD-RALIAIQGPETATVIQSLApSNDFSALKFGQSAYVDFK-GIRCLVSRGGYTGEDGFEIS 223
                 ***********************777.6667*****887.7******************8888**************9.******************** PP

       GCV_T 198 ipaeeaeelweaLleagkeegvkpaGlgArdtlRlEaglrlyghdldeettPleaglgw 256
                 +pa++  ++ + +l   ++++v+p+GlgArdtlRlEag++lyg+d+d++t+P+e +l w
  EPX71467.1 224 VPADASIDFAQSIL---ANKNVRPIGLGARDTLRLEAGMCLYGSDIDDTTSPVEGSLSW 279
                 *************6...6778************************************99 PP

>> GCV_T_C  Glycine cleavage T-protein C-terminal barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.9   0.1   4.6e-26   4.1e-22       1      79 [.     307     383 ..     307     384 .. 0.96

  Alignments for each domain:
  == domain 1  score: 77.9 bits;  conditional E-value: 4.6e-26
     GCV_T_C   1 RrlvglelddgapllrggepilrdgevvGhvTSgaysptlgksialAyvkaelaklgtevevevrgkrvpaevvkkpfy 79 
                 Rr vg+ ++++   +r+g  i  dg +vG +TSg++sp+l k+ia++yv ++++k+gt+v+v+vr+k  pa+vv++pf+
  EPX71467.1 307 RRRVGFIIENA--PARHGSIIEVDGVQVGNITSGCPSPSLSKNIAMGYVTTGFHKTGTSVHVKVRNKLQPATVVRMPFV 383
                 99******866..36******99*******************************************************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (389 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       374  (0.0208601); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.45
# Mc/sec: 2594.16
//
Query:       EPX71468.1  [L=308]
Description: 19S proteasome regulatory subunit Rpn11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-33  115.0   0.0    3.5e-33  114.1   0.0    1.5  1  JAB         JAB1/Mov34/MPN/PAD-1 ubiquitin protease
    2.2e-12   47.4   0.4    3.9e-12   46.6   0.4    1.4  1  MitMem_reg  Maintenance of mitochondrial structure and functi
      5e-07   29.5   0.0    7.9e-07   28.9   0.0    1.3  1  Prok-JAB    Prokaryotic homologs of the JAB domain


Domain annotation for each model (and alignments):
>> JAB  JAB1/Mov34/MPN/PAD-1 ubiquitin protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.1   0.0   5.8e-37   3.5e-33       3     117 ..      27     137 ..      25     138 .. 0.96

  Alignments for each domain:
  == domain 1  score: 114.1 bits;  conditional E-value: 5.8e-37
                 SCEEEEEHHHHHHHHHHHHHHHHHTS--EEEEEEEESSSEEEEEEEEEEESEEEESSECEEEEEHHHHHHHHHHHHHHHCTT.SEEEEEEEESSSS-SS CS
         JAB   3 vqavhleslvllkildhalrtekeeeevmGlliGelnddttveitnvfalpfeetekdvdavsldqeylekksellkklrgr.ervvGWYhshpditvw 100
                  + v ++sl+llk+l+h ++++    evmGl++Ge+ dd tv++++vfa+p+++t  +v+av+++ +  ++++++lk++ gr e vvGWYhshp++++w
  EPX71468.1  27 SECVYISSLALLKMLRHGRHGTPM--EVMGLMLGEFVDDFTVRVVDVFAMPQSGTGVSVEAVDPVFQ--KNMMDMLKQT-GRpEMVVGWYHSHPGFGCW 120
                 5789********************..**************************************999..*********9.999**************** PP

                 --HHHHHHHHHHHHHST CS
         JAB 101 lsevdvrtqalyqrmde 117
                 ls+vd++tq++++++++
  EPX71468.1 121 LSSVDINTQQSFEQLTP 137
                 ************99876 PP

>> MitMem_reg  Maintenance of mitochondrial structure and function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.6   0.4   6.5e-16   3.9e-12       1     103 [.     172     305 ..     172     307 .. 0.91

  Alignments for each domain:
  == domain 1  score: 46.6 bits;  conditional E-value: 6.5e-16
  MitMem_reg   1 Eaeei..gvehllkpsiqdasstlstglnrqyyslki.......................................lqerldlikdYlkkveegelpvn 58 
                 E++++  +++h++kpsiq    +l++gl+r+yysl+i                                       ++ + +l ++Y ++v+++ +   
  EPX71468.1 172 EPRQTtsNLGHINKPSIQ----ALIHGLGRHYYSLRInykkteleelmllnlhkqpwahgllldnfdaaanknqatMERMKSLSEQYTERVQNEITLTP 266
                 9*****************....**********************************************************************8764444 PP

  MitMem_reg  59 he.ilrnlqkllnllP..hleteelekefnvetnDvllvvyLasltrs 103
                 ++  +++++k++   P  hl++ e      +++ D+ ++++La ++ s
  EPX71468.1 267 EQlRIQYVGKQD---PkkHLDS-E-----VSQCIDMNISSMLAGMLDS 305
                 555*********...9988888.3.....3677799999999988765 PP

>> Prok-JAB  Prokaryotic homologs of the JAB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.9   0.0   1.3e-10   7.9e-07       4      93 ..      36     130 ..      33     153 .. 0.75

  Alignments for each domain:
  == domain 1  score: 28.9 bits;  conditional E-value: 1.3e-10
    Prok-JAB   4 vlsalvaharrahpeEtcGlllgkeseseevivvplvnewsn....rfeipdpedslarlkf...earerglevvgiwHSHpggsarPSetDrrdaa 93 
                 +l ++++h r+  p E  Gl+lg+  ++  v+vv++  ++++    ++e  dp  +  +  +   + + r + vvg +HSHpg +   S+ D+++ +
  EPX71468.1  36 ALLKMLRHGRHGTPMEVMGLMLGEFVDDFTVRVVDVFAMPQSgtgvSVEAVDPVFQKNM--MdmlKQTGRPEMVVGWYHSHPGFGCWLSSVDINTQQ 130
                 5789*********************8888888888775555588553333244444443..25589*****************98777777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (308 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       721  (0.0402142); expected 358.6 (0.02)
Passed bias filter:                      566  (0.031569); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2188.96
//
Query:       EPX71469.1  [L=119]
Description: hypothetical protein SOCG_01686 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      4e-09   37.2  16.0      4e-09   37.2  16.0    1.8  2  DUF1754          Eukaryotic family of unknown function (DUF17
  ------ inclusion threshold ------
      0.043   13.6   2.0      0.047   13.5   2.0    1.0  1  Phage_integrase  Phage integrase family
       0.26   11.7  12.6       0.34   11.3  12.6    1.1  1  PRP1_N           PRP1 splicing factor, N-terminal
       0.58    8.7   3.7       0.66    8.5   3.7    1.1  1  Actin            Actin
        1.1    8.1   6.0        1.3    7.8   6.0    1.0  1  Paramyxo_ncap    Paramyxovirus nucleocapsid protein
        3.7    6.5  13.1        4.3    6.3  13.1    1.0  1  DUF874           Helicobacter pylori protein of unknown funct


Domain annotation for each model (and alignments):
>> DUF1754  Eukaryotic family of unknown function (DUF1754)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.2  16.0   1.3e-12     4e-09       5      97 ..       3      82 ..       1      83 [. 0.68
   2 ?   -0.8   0.1      0.92   2.8e+03      24      32 ..      87      94 ..      81     112 .. 0.42

  Alignments for each domain:
  == domain 1  score: 37.2 bits;  conditional E-value: 1.3e-12
     DUF1754  5 vvgGkLKLKgkkivkegvkKkkkkkkkkskekkeeekekeeeekssaesdaesekdkeeeeddseekkekeeeqenlTeAErkfeevrkKrlk 97
                +vgG+LKLK++k      kK  kkkkk+sk+  e+++++  +e++++++        +  + ++   ++ +ee++  TeAEr+fe  ++Krl 
  EPX71469.1  3 FVGGSLKLKNVK------KKPLKKKKKSSKKLGEKAEQHLAAEEEDSKKA-------NPSDYQMLRVSDFKEEERDSTEAERQFEAIQEKRLL 82
                79**********......66666666666664444444444444444444.......23455556667777778999**************96 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.92
     DUF1754 24 Kkkkkkkkk 32
                K + k  +k
  EPX71469.1 87 KERFK-THK 94
                11111.111 PP

>> Phage_integrase  Phage integrase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   2.0   1.6e-05     0.047      56     145 ..      12     107 ..       1     112 [. 0.78

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.6e-05
                      EEEEEECSSSSEEEEECTHHHHHHHHHHHHHHCHCCTTTSBSSBET.......TSSB--HHHHHHHH.HHHHHHCT-SSC--TTHHHHHHHHHH CS
  Phage_integrase  56 lvheregKgskeravplseealellkellskaleeaeksellfask.......rgkplsrqtvrkaf.kraveeagiekpltpHtlRhsfataL 141
                      +v+++ +K++k+    l+e+a + l    +++ ++a++s++ +++        r++   +++++++  kr+ e+a++ +++++H+ R     +L
       EPX71469.1  12 NVKKKPLKKKKKSSKKLGEKAEQHLAAEEEDS-KKANPSDYQMLRVsdfkeeeRDSTEAERQFEAIQeKRLLEKAKK-ERFKTHKDRVDDYNRL 103
                      5778999****************999999999.99**********999*7666666666666666652344444555.5******998877777 PP

                      HHHC CS
  Phage_integrase 142 leag 145
                      le++
       EPX71469.1 104 LENQ 107
                      7775 PP

>> PRP1_N  PRP1 splicing factor, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3  12.6   0.00011      0.34      31     121 ..      19     111 ..       6     115 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00011
                 ................-------------------.--------------------HH.HHHHHHHHHHHHTT-------......-HHHHHH CS
      PRP1_N  31 seeekkkkkeeeeeeeedeedlqdeendefegese.glfakaeydedDeeAdriyeei.derlderrkkrreakekeelekvreekpkiqeqF 121
                 ++++k++kk  e++e++   + +d+++ + ++++  ++ + +e+++d  eA+r +e+i ++rl e+ kk+r +++k++++++++  ++ +e+F
  EPX71469.1  19 KKKKKSSKKLGEKAEQHLAAEEEDSKKANPSDYQMlRVSDFKEEERDSTEAERQFEAIqEKRLLEKAKKERFKTHKDRVDDYNRLLENQSEHF 111
                 22223333333333333344444444444456666455556699999***********5578****************999998888887777 PP

>> Actin  Actin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   3.7   0.00022      0.66     207     265 ..      56     114 ..      11     116 .. 0.72

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00022
       Actin 207 eaessaekeelekltesyktleeeevleeiKesvcevsedpegdeeksssspeksYeLP 265
                  + ++ e+++ ++ ++++++++e+++le++K +  +  +d   d++   ++  +++e+P
  EPX71469.1  56 VSDFKEEERDSTEAERQFEAIQEKRLLEKAKKERFKTHKDRVDDYNRLLENQSEHFEMP 114
                 223344588889999*************************99999999999*******9 PP

>> Paramyxo_ncap  Paramyxovirus nucleocapsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   6.0   0.00044       1.3     430     513 ..      11      95 ..       5     104 .. 0.77

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.00044
  Paramyxo_ncap 430 kraskkeekrekqsrkearesskedkkkeatdeeaaslsketlldvdttsesdedpleskksaeallklralakileds.eaeed 513
                    k+ +kk  k++k+s k+  e+++++  +e+ d+++a+ s+ ++l v   +e+++d +e+++  ea+ + r l k  +++ ++++d
     EPX71469.1  11 KNVKKKPLKKKKKSSKKLGEKAEQHLAAEEEDSKKANPSDYQMLRVSDFKEEERDSTEAERQFEAIQEKRLLEKAKKERfKTHKD 95 
                    45556666777777788888888888889999999999999**************************999999877654133333 PP

>> DUF874  Helicobacter pylori protein of unknown function (DUF874)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3  13.1    0.0014       4.3     128     212 ..      17     102 ..       9     112 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0014
      DUF874 128 eleqekkkaeniedratksqikleqekqktnksnielansqikveqerqkteqekq.kaekeaikleqekqktiktqrdlikeqkd 212
                  l+++kk ++++ ++a++     e++ +k+n s+ ++       e+er+ te e+q  a +e+  le+ k+   kt++d + + + 
  EPX71469.1  17 PLKKKKKSSKKLGEKAEQHLAAEEEDSKKANPSDYQMLRVSDFKEEERDSTEAERQfEAIQEKRLLEKAKKERFKTHKDRVDDYNR 102
                 57788888888988998888888888999*****998777767799*********9557899999************999887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2288  (0.127614); expected 358.6 (0.02)
Passed bias filter:                      607  (0.0338558); expected 358.6 (0.02)
Passed Vit filter:                        66  (0.00368119); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 862.42
//
Query:       EPX71470.1  [L=238]
Description: repressor-RNA polymerase III Maf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.3e-58  195.8   0.6    7.7e-58  195.5   0.6    1.1  1  Maf1      Maf1 regulator


Domain annotation for each model (and alignments):
>> Maf1  Maf1 regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  195.5   0.6   4.3e-62   7.7e-58       1     174 []      25     194 ..      25     194 .. 0.92

  Alignments for each domain:
  == domain 1  score: 195.5 bits;  conditional E-value: 4.3e-62
        Maf1   1 iegrlelYsckaagsdkklykkiekeleselessskeslslsaaseslssssPfgplsdkssrktlayLiatLnasfpdYDFsslrsseFkkekslksv 99 
                 i+g++e+Y++k++gsdkklyk ie++ ++++ + s++++   + + s++++sPfgpl+++ssr+t++y++atLnas+pd+DFs+l++++F ke+sl++v
  EPX71470.1  25 IHGKCEIYTTKSTGSDKKLYKAIESRCQEDMLAFSSSKS--PELAFSWTQQSPFGPLDQSSSRRTFMYIVATLNASHPDHDFSTLQPTDFYKEPSLSRV 121
                 679*************************98877544333..36788999************************************************** PP

        Maf1 100 innidstLsslveekyeelreklWklideeidlkdCdiYsYkpdedsdpfkeegalwsfnYFffnkklKrvlfls 174
                  +++++t+      + +   ++lW+++d++i+l++C+iYsY+pd+dsdp+++e  +ws+ YFffnk++Kr+l++s
  EPX71470.1 122 LDSVNATING--MGRGRISVNQLWETVDRHINLSECNIYSYTPDSDSDPYGDEALIWSMSYFFFNKNMKRMLYFS 194
                 ********99..3444456789***************************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       393  (0.0219198); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 1669.95
//
Query:       EPX71471.1  [L=231]
Description: cAMP-independent regulatory protein Pac2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.9e-45  153.4   1.3    6.2e-44  150.2   1.3    1.9  1  Gti1_Pac2  Gti1/Pac2 family
  ------ inclusion threshold ------
       0.16   11.3   0.0       0.22   10.8   0.0    1.1  1  NucS       Endonuclease NucS


Domain annotation for each model (and alignments):
>> Gti1_Pac2  Gti1/Pac2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.2   1.3   6.9e-48   6.2e-44       1     180 [.       3     162 ..       3     163 .. 0.80

  Alignments for each domain:
  == domain 1  score: 150.2 bits;  conditional E-value: 6.9e-48
                 SEES---SHHHHHHHHHHHHTTSS---SS---HHHHHHHSSTTEEEEEEHHHH--SS---S--B---EEETTEEEEEB--------------------- CS
   Gti1_Pac2   1 tfkgyiettkdalllieavlegilkrvtrRlkekErkeliksGsvFvfeeeesgikRWTDGvsWSpSrilgnfLvYreldkkrakkkkkkkkkkskest 99 
                 t++g i+t  da++l+ea++ g+l+rv+rRl+++Er+ li++GsvFv++e+e+g++RWTDG sWS Sr++g+fL+Yre++ kr+ ++ +++++ +++s+
  EPX71471.1   3 TYSGVIKTPLDAIILFEACRIGLLPRVQRRLSDHERS-LIRAGSVFVWDEREAGMRRWTDGKSWSASRVSGSFLTYREMEGKRKPYQATSSDNIKRSSS 100
                 8************************************.*******************************************999999888666654444 PP

                 ----------.................----------------------------------EEEEEEEEEE.TTTEEEEEEE CS
   Gti1_Pac2 100 kkeesksekasssssesseakessssseskasksskslekdserslvgsltdsykfkkdgLvKkTisvtlk.gkelhlisYy 180
                  + +++       +s   ++++ +              + + ++s+ ++ ++  ++k +gL+K+++s+t++ +++lhlisY 
  EPX71471.1 101 VDPHNSL------NSFP-QDDSGAG-------------SMSDDSSMDDESMRGLHYKPNGLIKQSFSITTSlNHKLHLISYS 162
                 3322211......1111.1111112.............223455666678888999***********99652677******6 PP

>> NucS  Endonuclease NucS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   2.5e-05      0.22       6      77 ..      16      85 ..      13     106 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 2.5e-05
        NucS  6 vvlarCkvsyeGraksrLeegerlivikpdGaflvhkdrkvePvnWqppkssltaevedgslilksirrkpe 77
                +++  C++    r++ rL + er ++    G++ v  +r+     W   ks++   v++++l+ + ++ k +
  EPX71471.1 16 ILFEACRIGLLPRVQRRLSDHERSLI--RAGSVFVWDEREAGMRRWTDGKSWSASRVSGSFLTYREMEGKRK 85
                67789******************987..46******************************999888876654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       290  (0.0161749); expected 358.6 (0.02)
Passed bias filter:                      234  (0.0130515); expected 358.6 (0.02)
Passed Vit filter:                         9  (0.00050198); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1669.83
//
Query:       EPX71472.1  [L=567]
Description: myb family protein Eta2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0073   16.5   5.3      0.034   14.4   0.4    3.5  3  Myb_DNA-bind_6   Myb-like DNA-binding domain
  ------ inclusion threshold ------
      0.046   13.6   0.1      0.046   13.6   0.1    2.7  4  Myb_DNA-bind_7   Myb DNA-binding like
      0.058   13.6   1.0      0.058   13.6   1.0    4.0  4  Myb_DNA-binding  Myb-like DNA-binding domain
       0.43   10.3   3.4        5.3    6.7   0.5    2.4  2  DUF2451          Protein of unknown function C-terminus (DUF2


Domain annotation for each model (and alignments):
>> Myb_DNA-bind_6  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.4   7.6e-06     0.034       1      45 [.     341     384 ..     341     396 .. 0.85
   2 ?   -1.0   0.1      0.47   2.1e+03      32      56 ..     412     435 ..     406     437 .. 0.77
   3 ?    2.0   0.0     0.057   2.6e+02      10      29 ..     488     516 ..     483     530 .. 0.66

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 7.6e-06
  Myb_DNA-bind_6   1 WteeEdeiLlklvekygndWknIaealnrRtpkqcfdrwknkLrp 45 
                     W+ee  ++L +lv++ g +W+ Ia++l+   +++c   w+ + +p
      EPX71472.1 341 WSEETFQKLYQLVSQRGTKWNWIATQLG-LPSEECALLWRFVAKP 384
                     999999*********************9.7789999888865444 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.47
  Myb_DNA-bind_6  32 pkqcfdrwknkLrpkisrkkwskee 56 
                      +q+ +++++ L+++ + +k   +e
      EPX71472.1 412 ESQVDFKFQS-LNDNKNFAKTRTAE 435
                     57999*****.99987766666555 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.057
  Myb_DNA-bind_6  10 lklvekygn.........dWknIaealnr 29 
                     l++v ++ +         dW+ I++ +++
      EPX71472.1 488 LEHVNNCVSadakitadlDWNRISSVMSK 516
                     5555554223455566669****999963 PP

>> Myb_DNA-bind_7  Myb DNA-binding like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   1.4       3.3   1.5e+04       5      18 ..     168     181 ..     167     183 .. 0.77
   2 ?   13.6   0.1     1e-05     0.046       2      35 ..     332     365 ..     331     373 .. 0.92
   3 ?   -4.8   1.0         4   1.8e+04      46      57 ..     465     476 ..     458     480 .. 0.59
   4 ?   -3.6   0.1       2.4   1.1e+04       8      16 ..     514     522 ..     506     525 .. 0.54

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 3.3
  Myb_DNA-bind_7   5 rkktkkWskeetek 18 
                     +k++++W++e+   
      EPX71472.1 168 KKRKSSWTEEDETW 181
                     578899**998765 PP

  == domain 2  score: 13.6 bits;  conditional E-value: 1e-05
  Myb_DNA-bind_7   2 frkrkktkkWskeetekFYkaLsqfGtDFsliak 35 
                     +r ++++++Ws+e  +k Y+ +sq Gt ++ ia+
      EPX71472.1 332 YRPKSEQETWSEETFQKLYQLVSQRGTKWNWIAT 365
                     88999***********************999975 PP

  == domain 3  score: -4.8 bits;  conditional E-value: 4
  Myb_DNA-bind_7  46 KlKFkkEerknp 57 
                     K+ +kk +rkn 
      EPX71472.1 465 KKSYKKRKRKNA 476
                     344555555554 PP

  == domain 4  score: -3.6 bits;  conditional E-value: 2.4
  Myb_DNA-bind_7   8 tkkWskeet 16 
                      +kW++ee 
      EPX71472.1 514 MSKWTNEEL 522
                     345666554 PP

>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1      0.92   4.1e+03       3      14 ..     110     121 ..     109     129 .. 0.83
   2 ?    2.3   1.1     0.044     2e+02       1      12 [.     171     182 ..     171     189 .. 0.85
   3 ?   13.6   1.0   1.3e-05     0.058       3      43 ..     340     379 ..     338     381 .. 0.92
   4 ?    0.6   0.3      0.15   6.7e+02       2      10 ..     515     523 ..     514     524 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.92
                      SSBHHHHHHHHH CS
  Myb_DNA-binding   3 kWteeEdelLle 14 
                      +Wte+  e L+ 
       EPX71472.1 110 SWTEDQRECLEA 121
                      7***99998865 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.044
                      CSSSBHHHHHHH CS
  Myb_DNA-binding   1 rgkWteeEdelL 12 
                      +++Wtee++  +
       EPX71472.1 171 KSSWTEEDETWF 182
                      689*****9877 PP

  == domain 3  score: 13.6 bits;  conditional E-value: 1.3e-05
                      SSBHHHHHHHHHHHHHHTTCHHHHHHHHTSS-HHHHHHHHH CS
  Myb_DNA-binding   3 kWteeEdelLleavkkhGnrWkkIaerlggRtekqcrsrwr 43 
                       W+ee  ++L+++v + G +W+ Ia  l g+  ++c + wr
       EPX71472.1 340 TWSEETFQKLYQLVSQRGTKWNWIATQL-GLPSEECALLWR 379
                      7***************************.699999998887 PP

  == domain 4  score: 0.6 bits;  conditional E-value: 0.15
                      SSSBHHHHH CS
  Myb_DNA-binding   2 gkWteeEde 10 
                      +kWt eE +
       EPX71472.1 515 SKWTNEELK 523
                      69*****87 PP

>> DUF2451  Protein of unknown function C-terminus (DUF2451)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.5    0.0012       5.3     167     205 ..     310     350 ..     304     356 .. 0.85
   2 ?    3.7   0.1    0.0099        45      31      98 ..     467     534 ..     461     563 .. 0.73

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0012
     DUF2451 167 eklskiksvpnleyveeYIkayylpekeleewikeh..eeY 205
                 e l ki++  + +   +YIk  y p++e e+w +e+  + Y
  EPX71472.1 310 EILLKIQNNVDKKSLLNYIKLVYRPKSEQETWSEETfqKLY 350
                 6688899989999999****************999864444 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.0099
     DUF2451  31 llpekkrglleeFyeqtvsavadlrepiykavasrllnleslleaianvkWdvkevatehssYvdqll 98 
                  ++++kr+++++Fy+    +  +  + +++a a+ + +l++   +    kW+ +e++ ++ + ++++ 
  EPX71472.1 467 SYKKRKRKNASRFYAGDSLQLLEHVNNCVSADAKITADLDWNRISSVMSKWTNEELKLQTDNLISTVK 534
                 667899********988888888888888888888888875544444459******999988777754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (567 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1320  (0.0736237); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.42
# Mc/sec: 4032.06
//
Query:       EPX71473.1  [L=372]
Description: CMGC/MAPK/ERK protein kinase Spk1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.2e-67  228.1   0.0    1.4e-67  227.8   0.0    1.1  1  Pkinase      Protein kinase domain
    2.9e-30  105.4   0.0    4.4e-30  104.8   0.0    1.2  1  Pkinase_Tyr  Protein tyrosine kinase
    2.9e-05   23.5   0.2    6.1e-05   22.5   0.2    1.5  1  Kdo          Lipopolysaccharide kinase (Kdo/WaaP) family
    0.00018   21.0   0.0    0.00028   20.3   0.0    1.4  1  Kinase-like  Kinase-like
      0.004   16.8   0.0      0.015   15.0   0.0    1.8  2  FTA2         Kinetochore Sim4 complex subunit FTA2
     0.0045   16.6   0.0     0.0067   16.0   0.0    1.2  1  RIO1         RIO1 family
     0.0049   16.8   0.4      0.054   13.4   0.0    2.0  2  APH          Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  227.8   0.0   5.5e-71   1.4e-67       1     264 []      38     327 ..      38     327 .. 0.89

  Alignments for each domain:
  == domain 1  score: 227.8 bits;  conditional E-value: 5.5e-71
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEE.....SSEEEEEEE--TTEBHHHHHHHHSS CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfee.....kdelylvleyveggeladllerkgs 94 
                 y+  + +G+G++G+V +av+k tg +vAvKki   +    +  ++lrEi++l++++h+ni+ +++++        +++y+v+e++e++ l ++++ ++ 
  EPX71473.1  38 YQMTSLIGQGAYGVVCSAVHKPTGIKVAVKKIHPFNHPVFT-LRTLREIRLLRHFHHENIIAILDILPPpsyqeLEDVYIVQELMETD-LYRVIR-SQP 133
                 667889**************************988776655.69*********************976655554899*********76.999996.789 PP

                 --HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.....BCTTTSCGGGS-HHHH.TTSCBSHHHHHHHHHHHH CS
     Pkinase  95 lseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.....ltsfvgtseYlAPEvl.keneyskkvDvWslGvil 187
                 ls+++++ +++qil++l+ +Hs+g++HrDlKp+N+L++ + +lK++DFGla+  ++ ++     +t++v+t++Y+APE++ + ++ysk++D+Ws G+il
  EPX71473.1 134 LSDDHCQYFTYQILRALKAMHSAGVVHRDLKPSNLLLNANCDLKVADFGLARSTTTVQEgspgfMTEYVATRWYRAPEIMlSFRDYSKAIDIWSTGCIL 232
                 *****************************************************999888999*****************9899**************** PP

                 HHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCT.SHH...HHHTTS........................-HHHHHHHHHHT-SSGCCSTTHHHHHTS CS
     Pkinase 188 yelltgkppfsgekgkekvekeldqlekilkilg.etkeklpeasei........................seeakdllkkllkkdpkkRltaeellqh 261
                 +e+l+ +p+f+g++ +        q++ il++lg +t  ++++ ++                         s+ea+dl++++l+ +p kR+taee+l+h
  EPX71473.1 233 AEMLAARPLFPGKDYH-------SQITLILNVLGtPTMDDFNRIRSArarkyirslpltskvpfknmfphaSPEAIDLVERMLTFNPDKRITAEEALEH 324
                 ***********44333.......344557777775334444444444667778999999999************************************* PP

                 GGG CS
     Pkinase 262 pyl 264
                 py+
  EPX71473.1 325 PYV 327
                 *96 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.8   0.0   1.7e-33   4.4e-30       3     200 ..      40     237 ..      38     263 .. 0.88

  Alignments for each domain:
  == domain 1  score: 104.8 bits;  conditional E-value: 1.7e-33
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEE.....SSSSEEEEEE--TTEBHHHHHHHT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvct.....keepllivteyvkgGdLlkfLrkk 95 
                  +++ +G+Ga+G V+++  k     + +kVavK+++  ++   + + l+e++++++++h+ni+++l +       + e ++iv e+++  dL   +r++
   EPX71473.1  40 MTSLIGQGAYGVVCSAVHK----PTGIKVAVKKIHPFNHPVFTLRTLREIRLLRHFHHENIIAILDILPppsyqELEDVYIVQELMET-DLYRVIRSQ 132
                  67789***********999....999**************99*************************98765544556********86.9******98 PP

                  CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEE.EETTSSTSGGGGS.-HHHH.HHSEEEHHHHHHH CS
  Pkinase_Tyr  96 ekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddey.vkkeeaklpvkWm.apEsl.kekkftsksDvWs 190
                     +l+ ++   f++q+ ++++ ++s  +vHrdl   N Ll+ n   k++DfGLar++++ +e      ++ +  +W+ apE++ + + ++++ D+Ws
   EPX71473.1 133 ---PLSDDHCQYFTYQILRALKAMHSAGVVHRDLKPSNLLLNANCDLKVADFGLARSTTTVQEGsPGFMTEYVATRWYrAPEIMlSFRDYSKAIDIWS 227
                  ...9*****************************************************9666655244456679999988***8715566********* PP

                  HHHHHHHHHT CS
  Pkinase_Tyr 191 fGvllwEift 200
                   G +l E++ 
   EPX71473.1 228 TGCILAEMLA 237
                  *******987 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.2   2.4e-08   6.1e-05      51     164 ..      74     179 ..      63     193 .. 0.83

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 2.4e-08
         Kdo  51 fklgrtravrEfrllkrLeeagvavpkpvaagavkvgleyrAlllterlegaqdLedllakwaelaeelkrallkavgrliaklhragvnHadlyakni 149
                 +++ ++r  rE+rll+ ++++ + ++  +      ++le    ++ e +e   dL  ++++ + l++   +    ++ r+ + +h+agv H+dl + n+
  EPX71473.1  74 HPVFTLRTLREIRLLRHFHHENIIAILDILPPPSYQELE-DVYIVQELME--TDLYRVIRS-QPLSDDHCQYFTYQILRALKAMHSAGVVHRDLKPSNL 168
                 556688999***********9999999998887777776.5679999998..59**99997.4599999999*************************** PP

         Kdo 150 llqqeeeeeaeiwli 164
                 ll+++      + + 
  EPX71473.1 169 LLNANC----DLKVA 179
                 **9986....44444 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   1.1e-07   0.00028     125     199 ..     118     191 ..      83     239 .. 0.71

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 1.1e-07
  Kinase-like 125 eilnkvlqkrsethkkletiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvv 199
                  + l+++   r+ + ++l +   ++ T q++r    +++ g+vh ++++ nlll+ +  l++ +f+ L r  t v+
   EPX71473.1 118 QELMETDLYRVIRSQPLSDDHCQYFTYQILRALKAMHSAGVVHRDLKPSNLLLNANCDLKVADFG-LARSTTTVQ 191
                  333333334445577787777799****************************************7.566555554 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.57   1.5e+03       9      41 ..      23      55 ..      16      74 .. 0.85
   2 !   15.0   0.0   5.7e-06     0.015     177     212 ..     142     177 ..     106     180 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.57
        FTA2  9 dgPkLkpFdfsaekdiefleyLgkglhsiVlkv 41
                + P ++  +f+ ++d+++ +++g+g+ ++V  +
  EPX71473.1 23 RSPHIHNLNFELPRDYQMTSLIGQGAYGVVCSA 55
                679999999999999*********999999866 PP

  == domain 2  score: 15.0 bits;  conditional E-value: 5.7e-06
        FTA2 177 qlpkllrdlkklhklgIvvrDlkeenyidgkLvDls 212
                  + ++lr lk +h++g+v+rDlk++n++ +  +Dl 
  EPX71473.1 142 FTYQILRALKAMHSAGVVHRDLKPSNLLLNANCDLK 177
                 4679***********************999988886 PP

>> RIO1  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   2.6e-06    0.0067      70     150 ..     103     182 ..      65     199 .. 0.78

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 2.6e-06
                 --S--EEEEETTEEEEE--EETTEEGGBHHHCG-HHHHHHHHHHHHHHHHHHHHTSTEEESS-STTSEEEETT.EEEE--GT CS
        RIO1  70 vpvPkpielkrhvlvmefigedgvaapklkdveeeeeaeelyeevleemrklykeaglvHaDLSeyNvlvded.kvviIDvs 150
                 +p P+  el++  +v e++++d +++ + + ++ +++ +   +++l++++ +++ ag+vH DL   N+l++ + ++ + D++
  EPX71473.1 103 LPPPSYQELEDVYIVQELMETDLYRVIRSQPLS-DDHCQYFTYQILRALK-AMHSAGVVHRDLKPSNLLLNANcDLKVADFG 182
                 455777788899999***997777777777777.8889999999999655.556*****************99999998886 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.1     0.014        36      29     108 ..      74     156 ..      54     158 .. 0.65
   2 !   13.4   0.0   2.1e-05     0.054     160     197 ..     151     185 ..     142     193 .. 0.74

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.014
                 -TTS-HHHHHHHHHHHHHHHHTT-.B--B-CTTBS-EEETTEEEEEEE----EE-SS.....HHHHHHHHHHHHHHHHHHCCHHCH CS
         APH  29 pparaaeeirrevallrlLakagv.pvPevlagdtddeeigllfalieyvpgrsllr.....klsaaqlpellealgeflaalhqv 108
                 +p     ++ re +llr+++  ++  +  +l      ++++  +++++ +  ++l+r     +ls+++ + + +++ ++l+a+h++
  EPX71473.1  74 HPV-FTLRTLREIRLLRHFHHENIiAILDILPP--PSYQELEDVYIVQELMETDLYRvirsqPLSDDHCQYFTYQILRALKAMHSA 156
                 333.456677999*******9999888788752..22222223333333444444444666999999*****************98 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 2.1e-05
                 --SSS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-E CS
         APH 160 lpgelptvllHgDlhpgNllvdpddgrvtGviDfedag 197
                  +   +++++H+Dl+p Nll++++ +    v Df++a+
  EPX71473.1 151 KA-MHSAGVVHRDLKPSNLLLNANCDLK--VADFGLAR 185
                 33.25799**************554444..88888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (372 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       327  (0.0182386); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 2624.43
//
Query:       EPX71474.1  [L=250]
Description: uroporphyrinogen-III synthase Ups1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.3e-37  128.1   0.0    3.8e-37  127.9   0.0    1.0  1  HEM4           Uroporphyrinogen-III synthase HemD
  ------ inclusion threshold ------
       0.11   12.3   0.0       0.16   11.7   0.0    1.3  1  Polyoma_coat2  Polyomavirus coat protein


Domain annotation for each model (and alignments):
>> HEM4  Uroporphyrinogen-III synthase HemD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.9   0.0   4.2e-41   3.8e-37       2     230 ..      16     238 ..      15     240 .. 0.92

  Alignments for each domain:
  == domain 1  score: 127.9 bits;  conditional E-value: 4.2e-41
                 HHHHHHHHTTEEEEE---EECCECCHHHHHHHHHT.....--SEEEE--HHHHHHHHHHHH..HTT---HHHHHCSEEESSHHHHHHHHHTT---SEE- CS
        HEM4   2 elaealearGaeplelPlieiepaedraelraalddleagkydwliftSanavealfealk..reeedvkalaslkvaavGpaTaraLeelglrvdlvp 98 
                  ++ea++++  ++ +l +++++   ++  l++ l +l  ++y +li+tS++  e+l++alk  +e++  + l++++v++vGpaT++++++lg++++ ++
  EPX71474.1  16 PYVEAFQRYLRNVHFLAVLRHQS-VNENVLQNKLAHLL-SNYCGLIVTSQRVSETLSAALKqlDETAEKTILNTIPVFTVGPATDDSIRRLGFQQT-YG 111
                 5889999999*************.88999999997775.79*********************99*******************************8.66 PP

                 ..SSSHHHHGGGS-....---E.EEEEE-SS.S--HHHHHHHHHTTEEEEEE-SEEEEE-HHHHHHHHHHHHT.T--SEEEESSHHHHHHHHHH-S-HH CS
        HEM4  99 seegtaegLaeelae...slag.krvlllrgeiarddlaegLeergaevdevevYetvpaeeepeelkealka.gevdavvftSpstvrnllellkdeg 192
                  + g +e La++++    ++++ k++l+l ge++rd++++ L + +  v+e++vY+t+  e+ + ++++ +k+  e+d++v++Sp+++ + l+  ++  
  EPX71474.1 112 RDCGRGEVLADLIQDwyqKTNPsKPLLFLMGEKHRDTIPKRLGKDR--VEELVVYVTQEIEQSQCQISDIIKEhPEIDWIVVFSPTQLCSSLASYSR-- 206
                 67***********997765555466*****************8887..*********999999999*****996688**********9999999885.. PP

                 HHHCTSEEEEESHHHHHHHHHTT---SEEETS--HHHH CS
        HEM4 193 delkevkvaaiGptTaealkklglkvdvvaeeptaegl 230
                       k+a+iGptT ++l+klg+++++v++ p++ +l
  EPX71474.1 207 ------KLATIGPTTGDYLQKLGIEPSLVSSAPNPVSL 238
                 ......89************************998776 PP

>> Polyoma_coat2  Polyomavirus coat protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.7e-05      0.16     176     231 ..     165     218 ..     148     250 .] 0.75

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.7e-05
  Polyoma_coat2 176 tsrelaerttkslsdtlarllEnarWavtnlpvelYsslqdYYseLpainpaqvRq 231
                    +++e++ +++ ++sd++ +  E   W v+ +p++l ssl +Y ++L++i p+    
     EPX71474.1 165 VTQEIE-QSQCQISDIIKEHPE-IDWIVVFSPTQLCSSLASYSRKLATIGPTTGDY 218
                    566765.789999999988765.79************************9976544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       812  (0.0452898); expected 358.6 (0.02)
Passed bias filter:                      706  (0.0393775); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 1873.78
//
Query:       EPX71475.1  [L=234]
Description: tetraspan protein Dni1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-17   63.5  15.6    5.8e-17   62.2  14.4    2.0  1  Fig1      Ca2+ regulator and membrane fusion protein Fig1
      0.005   16.4   8.5      0.005   16.4   8.5    1.9  2  DUF998    Protein of unknown function (DUF998)
  ------ inclusion threshold ------
      0.059   13.0  22.6       0.97    9.0  22.4    2.1  1  SUR7      SUR7/PalI family


Domain annotation for each model (and alignments):
>> Fig1  Ca2+ regulator and membrane fusion protein Fig1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.2  14.4   9.8e-21   5.8e-17      11     187 ..      44     198 ..      31     199 .. 0.86

  Alignments for each domain:
  == domain 1  score: 62.2 bits;  conditional E-value: 9.8e-21
        Fig1  11 gleelevrvGYlGvCvdkspksliCrkksnatelasllslsssssskstsdplnlvelakkfsdnvvhpyllmvaiiLtlllfllllyfplgseipllP 109
                 ++ + +v+vGY+ +C+  +++s++C+  +n  +++s                 ++ +l++kf    vhp++++++++++ ++fll +          +P
  EPX71475.1  44 SSRSAQVNVGYFSMCLIGGNNSVTCSRFTNTRSIPS----------------FSMADLRSKFLLPQVHPWMVVFSFCVCGVCFLLAAI-------GAIP 119
                 56678********************44444444444................55699*****************************66.......3455 PP

        Fig1 110 fkska..vskvalvlsflllllwlvgalwqhvassaastlveeasmgivkskvGkkaealgWfafaflllvclglwvlil 187
                 f  +   ++ + l ls++++l +lv++l+ hv++s++++++e++ +  + ++vGkk+ +l W+++++l +  l+  ++++
  EPX71475.1 120 FIDRLpyLRLIRLYLSVFTFLSILVTSLFVHVSVSSFVMAIEDTDV-YLHAAVGKKLVILMWVSMGLLAIASLIDAIFYV 198
                 5555555************************************998.68*********************9999888875 PP

>> DUF998  Protein of unknown function (DUF998)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.1     0.056   3.4e+02       2      33 ..      11      43 ..      10      60 .. 0.73
   2 !   16.4   8.5   8.4e-07     0.005      36     134 ..      93     191 ..      80     201 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.056
      DUF998  2 aaallalavilaaallrpgy.dplrhaiSeLga 33
                a+++ +l ++++ al+++g  + +++ iS   +
  EPX71475.1 11 ACGFSLLGAWIILALVMTGCkSETSSHISLFNL 43
                667777778888888888887777777776655 PP

  == domain 2  score: 16.4 bits;  conditional E-value: 8.4e-07
      DUF998  36 gpggwlfnaglvllgllvlalavgllra.argragragrlllavaglg.lvlagvfptdpgggsp....slsglvHglasavaflalavavlllasaar 128
                 + ++w+  + + ++g+++l+ a+g ++   r +  r+ rl l v+ +   ++  +f    ++++     ++  ++H++++   ++++ v++ lla    
  EPX71475.1  93 QVHPWMVVFSFCVCGVCFLLAAIGAIPFiDRLPYLRLIRLYLSVFTFLsILVTSLFVHVSVSSFVmaieDTDVYLHAAVGKKLVILMWVSMGLLA---- 187
                 569***************************************988776366666888887777779****************************9.... PP

      DUF998 129 rrawal 134
                   +++l
  EPX71475.1 188 --IASL 191
                 ..3333 PP

>> SUR7  SUR7/PalI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0  22.4   0.00016      0.97       7     211 ..      14     191 ..       8     192 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00016
        SUR7   7 flslaalilllfailgsiknstpltsiylskfdlsgldlaqigladvysfgvwgyCdnsdvnytkCskpkagypfdpleelnsesngkvdlPsnlrktl 105
                 f +l+a+i+l+++++g+   s + ++i l++++               ++g++++C    +n+ +Cs       f+      ++ +    +Ps    +l
  EPX71475.1  14 FSLLGAWIILALVMTGCK--SETSSHISLFNLSSR---------SAQVNVGYFSMCLIGGNNSVTCSR------FT------NTRS----IPSFSMADL 85 
                 67899************9..888888888888888.........45679*******99999******9......33......3333....666666666 PP

        SUR7 106 sklnnltkalfilhiialvlsfislvvgllaicvspdnsrllsflnlllsvlsflatllaalldtllfvfvrkkinlkefgikaslglkflafaWlala 204
                      l ++   + + +++   ++++++ ++ +   d  + l ++ l lsv++fl++l+++l + + +  +  +i+  +   +a +g+k + ++W+++ 
  EPX71475.1  86 RSKFLLPQVHPWMVVFSFCVCGVCFLLAAIGAIPFIDRLPYLRLIRLYLSVFTFLSILVTSLFVHVSVSSFVMAIEDTDVYLHAAVGKKLVILMWVSMG 184
                 6655666667777777777777777776666654568888777777788888888888888888777777778888889999***************99 PP

        SUR7 205 aallvvi 211
                 ++ ++++
  EPX71475.1 185 LLAIASL 191
                 9888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (234 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       905  (0.0504769); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 1799.84
//
Query:       EPX71476.1  [L=233]
Description: hypothetical protein SOCG_01693 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       448  (0.0249875); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 1727.61
//
Query:       EPX71477.1  [L=228]
Description: ribulose phosphate 3-epimerase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.1e-74  248.0   0.0      6e-74  247.7   0.0    1.0  1  Ribul_P_3_epim  Ribulose-phosphate 3 epimerase family
  ------ inclusion threshold ------
      0.041   13.7   0.0      0.098   12.4   0.0    1.6  1  QRPTase_C       Quinolinate phosphoribosyl transferase, C-ter
      0.074   12.6   0.0       0.14   11.8   0.0    1.5  1  OMPdecase       Orotidine 5'-phosphate decarboxylase / HUMPS 


Domain annotation for each model (and alignments):
>> Ribul_P_3_epim  Ribulose-phosphate 3 epimerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  247.7   0.0     1e-77     6e-74       1     198 []       5     201 ..       5     201 .. 0.99

  Alignments for each domain:
  == domain 1  score: 247.7 bits;  conditional E-value: 1e-77
                     EEEEBGGGS-GGGHHHHHHHHHHTT-SEEEEEEEBSSSSS-B-B-HHHHHHHGGG...E-S-EEEEEESSSHHHCHHHHHHCT-SEEEEE-ST-T CS
  Ribul_P_3_epim   1 kiapSllsadfarlgeevkaveeagadllHvDvmDghfvpNltigplvvealrkl...telpldvHLmveevdrivpefaeagasiisvHaEale 92 
                     kiapSlls dfa+l++ev ++ ++g+d+lHvD+mD++fvp ltigp+vv+a+r++   +++++d+HLmv +++++v+efa+aga+++++H+Ea+e
      EPX71477.1   5 KIAPSLLSGDFANLEHEVGRMLQYGSDWLHVDIMDSQFVPSLTIGPIVVKAMRNHftkEKAFFDCHLMVMNPEKWVDEFADAGANMFCFHYEATE 99 
                     69****************************************************9988889********************************** PP

                     THHHHHHHHHHTTSEEEEEE-TT--GGGGTTTCCC-SEEEEESS-TT-SS----CCHHHHHHHHHHHHHHHT---EEEEESS--TTTCHHHHHHT CS
  Ribul_P_3_epim  93 hlkrtiqeikeaGakaglvlnpatplealeyllekldlvllmsvePgfgGQkFipevlekikkvrklidekeldlkievDGGvkldnieqiaeag 187
                     ++ ++iq+ +e G+ + ++++p+tp+e+l+ l+++ld+ l+m+vePg+gGQ+F  e+l+k++ +rk++++    l+ievDGG++ ++++++ eag
      EPX71477.1 100 KHMEIIQRAHERGMLVSCAIKPNTPVEVLDPLVQHLDMALVMTVEPGKGGQSFRAECLPKVNYLRKRYPN----LNIEVDGGLSPKTVDAASEAG 190
                     *********************************************************************8....********************* PP

                     --EEEESHHHH CS
  Ribul_P_3_epim 188 advlVagsavf 198
                     a+v+Vag+avf
      EPX71477.1 191 ANVIVAGTAVF 201
                     **********9 PP

>> QRPTase_C  Quinolinate phosphoribosyl transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   1.6e-05     0.098     118     161 ..     160     203 ..     152     206 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.6e-05
                 HHHHHHHSTTSEEEEESS--TTTHHHHHCTT-SEEEECHHCHTB CS
   QRPTase_C 118 veelkeknkrvlievSGgvtlenveeyaksgvdvisvgalthsv 161
                 v++l+++ +++ iev Gg++ ++v +  + g +vi  g+++ ++
  EPX71477.1 160 VNYLRKRYPNLNIEVDGGLSPKTVDAASEAGANVIVAGTAVFKA 203
                 7788999999****************************997665 PP

>> OMPdecase  Orotidine 5'-phosphate decarboxylase / HUMPS family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.3e-05      0.14     184     222 ..     173     210 ..     148     213 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.3e-05
                 EECTTCCGGGHHHHHHHTTCSEEEESHHHHTSSSHHHHH CS
   OMPdecase 184 gdgkgqqyntpekligiagadiiivGRgIlkagdpveea 222
                 ++ +g+ ++t++++ + aga++i++G +++ka++p + +
  EPX71477.1 173 EVDGGLSPKTVDAASE-AGANVIVAGTAVFKAENPTQVI 210
                 6678999999988855.99****************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       450  (0.025099); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1595.00
//
Query:       EPX71478.1  [L=362]
Description: homoisocitrate dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-96  323.4   0.0    2.8e-96  322.7   0.0    1.3  1  Iso_dh    Isocitrate/isopropylmalate dehydrogenase


Domain annotation for each model (and alignments):
>> Iso_dh  Isocitrate/isopropylmalate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  322.7   0.0  1.6e-100   2.8e-96       3     348 .]      10     356 ..       8     356 .. 0.94

  Alignments for each domain:
  == domain 1  score: 322.7 bits;  conditional E-value: 1.6e-100
                 EEEEESTTHHHHHHHHHHHHHHHHHHHT-EEEEEE---THHHHHHHSSSS-HHHHHHHHHS.SEEEEEE---CSSSSSSHHH.HHHHHHHHTTEEEEEE CS
      Iso_dh   3 allegdgiGpevveaalkvlkaakekaglelefeevdvGgaaidetgeplpeetleaikea.dvvllgavgtpkekevrpen.gLlaLrkeldlfanlr 99 
                  l++ dgiG evv+aa ++++++ +k++l+++f + d+G  ++++tg++lp+ tle++k++ +++l+gav++p  ++v+ ++ +++aLrk+++l+an+r
  EPX71478.1  10 GLIPADGIGREVVPAARRLIENLPSKHKLQFDFVDLDAGWGTFERTGKALPDITLEKLKKEcNAALFGAVQSPS-HKVEGYSsPIVALRKKMGLYANVR 107
                 589*******************************************************9888************.777777779*************** PP

                 EEE-BCCTTCCSSBTHHHHCT-EEEEEEE-SSCGGCSSEEEEETTG.GGGEEEEEEEEEHHHHHHHHHHHHHHHHHT............TTSEEEEEES CS
      Iso_dh 100 pvkvfeklkvksplkrevveevdlvivReltggiYfgeekekkgsifteevavdtklyseeeieriaraafelAlkr............gkkkvtlvdK 186
                 pvk++    +  + k+     +dlvivRe+t+ +Y++ee++ +++  +++va  t ++see++ +i ++afe+A++r            ++  vt+++K
  EPX71478.1 108 PVKSL----DGAQGKP-----IDLVIVRENTECLYVKEERMVETT-PGKRVAEATRRISEEASVKIGKMAFEIAKSRqalrtsgaasihKNPLVTIIHK 196
                 *****....6777886.....9********************998.69**************************9998888887777744556899*** PP

                 TTTTHHHH.HHHHHHHHHHCC..TTTTSEEEEEEHHHHHHHHHHSGGGGSEEEE-HHHHHHHHHHHHHHTTSGCC-EEEEEETSS-EEEEESS---CCC CS
      Iso_dh 187 anvlksse.lwrkiveevaee..eypdielehqlvDsaamqlvkspkqfdVivtkNlfGDilSDeaaalvGslGllpSaslgekkvaifEavHGsapdi 282
                 +nv+++++ l+r+ + +  +    y+ i +++q+vDs++++l+++p++fdV+v++Nl+GDilSD aa l+GslGl+pSa++g +++++ E+vHGsapdi
  EPX71478.1 197 SNVMSVTDgLFRESCRHARSLspSYSSIAMDEQIVDSMVYRLFREPQCFDVVVAPNLYGDILSDGAASLIGSLGLVPSANVG-DGFVMSEPVHGSAPDI 294
                 ********888887765544366***********************************************************.79************** PP

                 TTSS-S-THHHHHHHHHHHHHTTT-HHHHHHHHHHHHHHHHH.TSCCHHHCTTSTCCCHHHHHHHHH CS
      Iso_dh 283 agkdkaNpiavilSaalmLryslgleeaAdkiekAvekvlea.givTkDlageaakevstsefgdav 348
                 ag+++aNp+a+  S+almL++ +g+++aA++i +Av+kvl++ +i+T Dl+g++    +t+e++dav
  EPX71478.1 295 AGRNIANPVATFRSVALMLEF-MGHQQAAANIVNAVDKVLDQgKILTPDLGGKS----TTNEITDAV 356
                 *********************.********************899*********....9*****997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (362 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       364  (0.0203023); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.28s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2588.17
//
Query:       EPX71479.1  [L=133]
Description: 40S ribosomal protein S11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.3e-27   95.6   0.7    1.3e-27   95.6   0.7    1.5  2  Ribosomal_S17    Ribosomal protein S17
    6.4e-09   36.1   2.7    0.00037   20.8   0.4    2.6  2  Ribosomal_S17_N  Ribosomal_S17 N-terminal


Domain annotation for each model (and alignments):
>> Ribosomal_S17  Ribosomal protein S17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.56     5e+03      12      23 ..       5      17 ..       1      24 [. 0.65
   2 !   95.6   0.7   1.5e-31   1.3e-27       1      67 [.      51     118 ..      51     119 .. 0.98

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.56
                   EEEEEEE.EEEET CS
  Ribosomal_S17 12 vvVrver.lvkhp 23
                    vV+ er ++k+p
     EPX71479.1  5 LVVQSERaYQKQP 17
                   6788888444444 PP

  == domain 2  score: 95.6 bits;  conditional E-value: 1.5e-31
                    EEEEE--STTEEEEEEEEEEEETTTTEEEEEEEEEEEE-TTTS.--TT-EEEEEEECECSSSEEEEEE CS
  Ribosomal_S17   1 GvVvsdkmdkTvvVrverlvkhpkykkyvkrrkkylahdenns.vkvGDiVrieecrPlSktkrfvvv 67 
                    G+Vvs+km++T+++r+e+l+ +pky++y+kr+k++ ah ++ + +++GD+V++++crPlSkt+rf+v+
     EPX71479.1  51 GTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNVAAHVSPAFrINEGDVVTVGQCRPLSKTVRFNVL 118
                    99****************************************************************97 PP

>> Ribosomal_S17_N  Ribosomal_S17 N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.4   4.2e-08   0.00037       1      36 [.       8      35 ..       8      36 .. 0.81
   2 !   15.1   0.1   2.4e-06     0.022      57      69 .]      37      49 ..      34      49 .. 0.94

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 4.2e-08
                     --SSS----SS--------------....------- CS
  Ribosomal_S17_N  1 qterafqkQetvflnkkkskeekkkkkkkkryvknv 36
                     q+era+qkQ+++f+n+k      k     +r++k+v
       EPX71479.1  8 QSERAYQKQPHIFQNAK------KG--AGRRWYKDV 35
                     89***************......22..237888876 PP

  == domain 2  score: 15.1 bits;  conditional E-value: 2.4e-06
                     SSSSS----S-EE CS
  Ribosomal_S17_N 57 PFtGnvsirGriL 69
                     PF G+vsirGriL
       EPX71479.1 37 PFVGEVSIRGRIL 49
                     ************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       292  (0.0162865); expected 358.6 (0.02)
Passed bias filter:                      234  (0.0130515); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 973.02
//
Query:       EPX71480.1  [L=233]
Description: ER chaperone Rot1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-83  277.9   0.5      5e-83  277.7   0.5    1.0  1  Rot1      Chaperone for protein-folding within the ER, fungal


Domain annotation for each model (and alignments):
>> Rot1  Chaperone for protein-folding within the ER, fungal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  277.7   0.5   2.8e-87     5e-83       2     209 .]      29     229 ..      28     229 .. 0.94

  Alignments for each domain:
  == domain 1  score: 277.7 bits;  conditional E-value: 2.8e-87
        Rot1   2 vGtWssksnkvltGpgfydpveekliePsltGisysFteDGfyEealyrvvanpknpsCpkavlqfqHGtyeleangslvltPievDGRqllsdpCk.k 99 
                  G Wssks++v+tGp+fydp++e ++eP+l+GisysFt+DG++Eealy +++n++ p+Cpka+lq+qHGty++++  s++l+P++ DGRql sdpC+  
  EPX71480.1  29 IGSWSSKSQTVMTGPDFYDPLHEDFFEPDLPGISYSFTQDGHFEEALYIIKSNATFPHCPKAFLQWQHGTYTINESKSIILSPVKGDGRQLESDPCNfG 127
                 79***********************************************************************************************99 PP

        Rot1 100 kkstytrynqselfkkyevlvdeyhgvkrlnlyqfdgspmqplylaykppqmlPtetlnptekasekvkrsleseeklkknavkkkeeslnadklwwvg 198
                 + s ytrynq+e++k+y+v++d+yhg+++l+l+++dg+p qp+yl+y+pp+mlP +  ++t++++ ++kr+l+     + +a+     + +++++ww+g
  EPX71480.1 128 NYSSYTRYNQDEVMKEYSVSIDKYHGRYKLELFEWDGTPKQPMYLVYRPPKMLPVSFSDATDTNQLQQKRWLS-----RVTATLA---EKHTSTIWWLG 218
                 99**********************************************************************4.....2223322...235789***** PP

        Rot1 199 vlllavgsval 209
                 + ++a+gs+ +
  EPX71480.1 219 LSFIAIGSIGY 229
                 *******9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       448  (0.0249875); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 1763.21
//
Query:       EPX71481.1  [L=329]
Description: RNA-binding protein Sap49 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-35  120.8   0.1    1.6e-18   66.3   0.1    2.2  2  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
     0.0013   18.4   0.0      0.081   12.5   0.0    2.3  2  RRM_5     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
     0.0066   16.1   0.7       0.14   11.9   0.1    2.3  2  OB_RNB    Ribonuclease B OB domain


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.7   0.0   4.7e-18   2.8e-14       1      70 []      13      83 ..      13      83 .. 0.98
   2 !   66.3   0.1   2.7e-22   1.6e-18       1      69 [.     101     170 ..     101     171 .. 0.97

  Alignments for each domain:
  == domain 1  score: 52.7 bits;  conditional E-value: 4.7e-18
                EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1  1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrelk 70
                +++gnL + vt++ L el  + Gp+ +i ++rd  +++++gf+f+eF ++ dAe A + +n  kl g++l+
  EPX71481.1 13 IYLGNLDERVTDSILFELCLQAGPVGNIHIPRDrVRNSHNGFGFCEFVNEHDAEYACQIFNQIKLYGKPLR 83
                89*****************************************************************9985 PP

  == domain 2  score: 66.3 bits;  conditional E-value: 2.7e-22
                 EEEESETTTSSHHHHHHHHHTTSCE.EEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpi.ksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 lf+gnL p v+e+ L++ Fs  G+  k+ ++vrd +g+skgf+fV+F+s e A++A+ea+n++ l+++++
  EPX71481.1 101 LFIGNLDPLVDERVLYDTFSALGQLiKTPQVVRDDNGRSKGFGFVNFDSFETADAAIEAMNNQFLMNKPI 170
                 8**********************98799****************************************98 PP

>> RRM_5  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   0.0   1.4e-05     0.081      37     102 ..      20      90 ..       3     104 .. 0.78
   2 !    3.5   0.0    0.0085        51      65      98 ..     141     174 ..     137     184 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.4e-05
       RRM_5  37 dkvnldklFnlfclYgnvervkf.....lktkketalvqmgdasaveravqHLnnaklfgkrlevalSKqq 102
                 ++v+ + lF l  + g v  + +       + ++  + +  ++ ++e a q +n +kl+gk+l+v  S q+
  EPX71481.1  20 ERVTDSILFELCLQAGPVGNIHIprdrvRNSHNGFGFCEFVNEHDAEYACQIFNQIKLYGKPLRVNKSSQD 90 
                 4677788888887777776666522221456789999*****************************99986 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.0085
       RRM_5  65 etalvqmgdasaveravqHLnnaklfgkrleval 98 
                 +  +v+  +   ++ a++ +nn+ l +k++ v  
  EPX71481.1 141 GFGFVNFDSFETADAAIEAMNNQFLMNKPITVSY 174
                 5667888888999***************999875 PP

>> OB_RNB  Ribonuclease B OB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.1     0.021   1.3e+02       2      14 ..      46      58 ..      46      65 .. 0.85
   2 !   11.9   0.1   2.3e-05      0.14       5      34 ..     137     167 ..     136     189 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.021
                EEEE-SSS-EEEE CS
      OB_RNB  2 tvrahkkGFGFli 14
                +vr + +GFGF +
  EPX71481.1 46 RVRNSHNGFGFCE 58
                689999*****75 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 2.3e-05
                 E-SSS-EEEEECT..TEEEEE-HHHHTTS-T CS
      OB_RNB   5 ahkkGFGFlipde.gkeDifippeqmkkamh 34 
                 + +kGFGF+  d+ +  D  i + + +  m+
  EPX71481.1 137 GRSKGFGFVNFDSfETADAAIEAMNNQFLMN 167
                 568**********9999*9999988888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (329 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       446  (0.0248759); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2350.97
//
Query:       EPX71482.1  [L=703]
Description: transcription factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.2e-29  101.4   3.3    9.7e-29  100.2   3.3    1.6  1  Fungal_trans  Fungal specific transcription factor domain
    5.3e-10   39.2  10.2      1e-09   38.3  10.2    1.4  1  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain
  ------ inclusion threshold ------
      0.018   14.8   0.9      0.044   13.5   0.9    1.6  1  PSI_integrin  Integrin plexin domain


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.2   3.3   1.6e-32   9.7e-29       2     245 ..     146     398 ..     145     426 .. 0.85

  Alignments for each domain:
  == domain 1  score: 100.2 bits;  conditional E-value: 1.6e-32
  Fungal_trans   2 drffsnfh.pqfpilhkpsflpktssenssksayaspllllailalGalfsesetkesnssltsesqefiafplraeilihedfsspssslwilqsL 97 
                   ++f + ++ ++++i++kp ++++       ++   +pll+l+i+a +a+fs++e ++ +s++  +  +f+    +++++++ +f+ ++ sl  + +L
    EPX71482.1 146 EIFLKTSYtELYGIFNKPCITSQI------SKGTIDPLLALCICAHAARFSQEEINIFKSPSAAS--DFY----AKNAFSLLSFQLQDISLINISAL 230
                   689999999***************......***************************98888873..455....*********************** PP

  Fungal_trans  98 lllelyektssdralherhhgvavrlarslgLhrnpsyvgkks..lwklweeeaesrrRlwwaaFylDktialklGrpp.l....lddsqinlpLPc 187
                   l+l+l e++ ++ +++++++g+a+r+a sl L+ + s ++ +s      w e  e+rrR++w++F++++++a+ +  p+ l    l+ ++++++LPc
    EPX71482.1 231 LMLCLIELGAGRSSKAWLLLGMALRMADSLDLGNDFSEESFSSipAMSNWTE-GEQRRRTYWSCFMIERLLATGFMAPSkLrtvsLSPNKTSIQLPC 326
                   **********************************999999999998899999.9*************************966677999999999999 PP

  Fungal_trans 188 ddddlwesd.daseetlvetk...............lsneeksrkiasfllaLkkilskiagsllsiekqlqqr 245
                    + ++ +s   ++e ++   +                  +   +    +l++L+ i+s+i++++l  ++  ++ 
    EPX71482.1 327 PEANFFFSQpIVTELFDG--SipqnalegqsqtsskSTANDYLSFTMGSLIRLSDIWSDISRWVLRGGYSQDIV 398
                   998555543133333333..345899999988888877777777888889999999999999888877776665 PP

>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.3  10.2   1.7e-13     1e-09       1      35 [.      22      55 ..      22      60 .. 0.89

  Alignments for each domain:
  == domain 1  score: 38.3 bits;  conditional E-value: 1.7e-13
                SS-HHHHHCT---STSSSS-HHHHHCTHHHCCCCT CS
     Zn_clus  1 haCdnCrkkKvKCdakkPaCsnCkklnleCtfyse 35
                +aC +Cr+kKvKC+++kPaC+ C  +n+eC+  ++
  EPX71482.1 22 QACLRCRQKKVKCSGEKPACQACLNNNVECV-WPD 55
                69****************************9.444 PP

>> PSI_integrin  Integrin plexin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.9   7.3e-06     0.044       2      35 ..      33      65 ..      32      75 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 7.3e-06
  PSI_integrin  2 sCksa.ksCkeCiqsgpsCaWCkqenftsessRCd 35
                  +C+   + C+ C+  + +C+W   +n   +++R +
    EPX71482.1 33 KCSGEkPACQACLNNNVECVWPDRPNM--RGKRSS 65
                  5998889**************999999..777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (703 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       442  (0.0246528); expected 358.6 (0.02)
Passed bias filter:                      282  (0.0157287); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 5002.59
//
Query:       EPX71483.1  [L=407]
Description: cytochrome b2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   1.8e-110  369.3   0.0   2.1e-110  369.0   0.0    1.0  1  FMN_dh        FMN-dependent dehydrogenase
    2.3e-06   27.3   0.2    3.1e-06   26.8   0.2    1.1  1  NMO           Nitronate monooxygenase
    2.4e-05   23.5   0.6    3.6e-05   22.9   0.6    1.3  1  IMPDH         IMP dehydrogenase / GMP reductase domain
    5.7e-05   22.6   0.4       0.13   11.6   0.4    2.2  2  ThiG          Thiazole biosynthesis protein ThiG
    0.00014   21.2   0.2     0.0002   20.6   0.2    1.2  1  Glu_synthase  Conserved region in glutamate synthase
     0.0093   15.2   0.2      0.066   12.4   0.2    2.0  1  DHO_dh        Dihydroorotate dehydrogenase
  ------ inclusion threshold ------
      0.014   14.8   0.3       0.22   10.9   0.0    2.0  2  His_biosynth  Histidine biosynthesis protein


Domain annotation for each model (and alignments):
>> FMN_dh  FMN-dependent dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  369.0   0.0  8.2e-114  2.1e-110       1     339 [.      43     394 ..      43     404 .. 0.90

  Alignments for each domain:
  == domain 1  score: 369.0 bits;  conditional E-value: 8.2e-114
                 HHCCS-HHHHHHHH--STTSHHHHHHHHGGGGEEE---SSSS-SS-B--EEETTEEESSSEEE--BSTGGGTSTTHHHHHHHHHHHHTS-EEEETT-SS CS
      FMN_dh   1 ArkrlpkkafayvaggagdevtlrenraaferirlrprvlrdvskvdlsttllGqklslPvliaPvglaklahpdgelalaraaakagipfvlstvast 99 
                 A +rl+k a  yv g ag+  t ++n ++++++ + p+ l++   ++l t+l+G+++s+P+ ++Pvg++ +++p+ge+   +aa    +p+++st++s 
  EPX71483.1  43 AMDRLSKDATGYVYGSAGKRETTEKNAESYKKWSIIPNRLVKSDFPNLGTKLFGRNYSFPIALGPVGVQLIFNPEGERGSSKAATLEHVPYIISTASSL 141
                 6789*********************************************************************************************** PP

                 -HHHHHHHHT.T-EEEEEE-C..SSHHHHHHHHHHHHHCTESEEEEESSTSS---BHHHHHCT--BSTT-T.G.TTGGGSTSGSCCTTH.......... CS
      FMN_dh 100 sleevaaaae.gplwfqlyvp..kdrelteellkraeaagykalvltvDtpvlgkRerdlrngfslppklklrnllqelakpewaaeal........kk 187
                 s+ee+a++++ g++w+qly+p  +d+++t++llkra++ ++++lv+t+Dt +lg+R +d++ng+    k ++  ++  l +p  +++++        ++
  EPX71483.1 142 SFEEIAESSGpGERWYQLYWPknEDNDITASLLKRAKSINCEVLVVTLDTYILGWRPSDMDNGYDPFLKPDQVGVALGLSDPVFRKRFKeehgveveQD 240
                 *******64438********9667899***********************************9854444333334444444444444444445877666 PP

                 THHHH.HHCCCHB.-TC--HHHHHHHHHHHSSEEEEEEE-SHHHHHHHHHTTESEEEE--GGGTSSTT---HHHCHHHHHHHH..SS-EEEESS--SHH CS
      FMN_dh 188 asaaa.efvgkql.dpsltwddikwlreqtklplvvKGvltaedakraveaGvdgivvSNHGGRqldgapatidvLpeiveavggrievlvDgGirrGs 284
                  ++aa ef g ++  +s +w+d+k lr+++++p+v+KG+++++dak+a+e G+dgivvSNHGGRq dg +a++ +Lp+iv+avg+++e+++D+Gir+G+
  EPX71483.1 241 LHKAArEFSGIIFpGTSHDWEDLKFLRQHWDGPIVLKGIQSVADAKKAAEFGIDGIVVSNHGGRQQDGGVASLTMLPKIVDAVGDKLEIIFDSGIRSGA 339
                 666664666655556677********************************************************************************* PP

                 HHHHHHHTT-SEEEESHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-SBHH CS
      FMN_dh 285 DvlkAlalGAdavllGRpflyglaagGeeGvervleilraelertmallGvksva 339
                 D++kAlalGA++vl+GRp++ygla++G++Gv++v+++l  +le t++l G+ s+a
  EPX71483.1 340 DIVKALALGAKMVLIGRPYVYGLAIAGTKGVRHVIRCLLGDLELTLHLSGIPSIA 394
                 ****************************************************996 PP

>> NMO  Nitronate monooxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.2   1.2e-09   3.1e-06     131     223 ..     267     356 ..     228     362 .. 0.86

  Alignments for each domain:
  == domain 1  score: 26.8 bits;  conditional E-value: 1.2e-09
         NMO 131 rlkeagvvliptissvkearkvearGaDalivqGpeaGGhqGtpevgdkglfaLvpqvldavd..iPviAaGGiidrrgvaaaLalGAsgvqigt 223
                 r++  g +++  i sv +a+k+++ G D ++v  ++ GG q     g++  ++++p+++dav   + +i   Gi  + ++  aLalGA+ v ig 
  EPX71483.1 267 RQHWDGPIVLKGIQSVADAKKAAEFGIDGIVV--SNHGGRQQ---DGGVASLTMLPKIVDAVGdkLEIIFDSGIRSGADIVKALALGAKMVLIGR 356
                 66777889999*********************..58999998...44467999*********889**************************9995 PP

>> IMPDH  IMP dehydrogenase / GMP reductase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.6   1.4e-08   3.6e-05     189     237 ..     309     356 ..     261     368 .. 0.82

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 1.4e-08
                 ---HHHHHHHHHHHHCTCT-EEEEES---SHHHHHHHHHTT-SEEEESC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       IMPDH 189 GvpqltAvaevaeaakkagvpviaDGGikysgdivkAlaaGadavmlGs 237
                 Gv+ lt + ++++a+   + ++i D Gi++  divkAla+Ga++v++G+
  EPX71483.1 309 GVASLTMLPKIVDAVG-DKLEIIFDSGIRSGADIVKALALGAKMVLIGR 356
                 5666666666665554.3589***************************7 PP

>> ThiG  Thiazole biosynthesis protein ThiG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.0   0.00032      0.82     165     204 ..     261     299 ..     254     308 .. 0.89
   2 !   11.6   0.4     5e-05      0.13     160     203 ..     309     354 ..     303     358 .. 0.91

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00032
                 HHHHHHHHH-SS-BEEES---SHHHHHHHHHTT-SEEEES CS
        ThiG 165 ealkiiieeakvPvivDAGigspsdaaqamelGadavlln 204
                 e lk+++++ + P+++  Gi s  da +a e+G+d++++ 
  EPX71483.1 261 EDLKFLRQHWDGPIVL-KGIQSVADAKKAAEFGIDGIVVS 299
                 67999********988.5*******************986 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 5e-05
                 --S-HHHHHHHHHH-..SS-BEEES---SHHHHHHHHHTT-SEEEE CS
        ThiG 160 Gllnkealkiiieea..kvPvivDAGigspsdaaqamelGadavll 203
                 G+++ ++l  i++ +  k+ +i D Gi+s  d+++a+ lGa+ vl+
  EPX71483.1 309 GVASLTMLPKIVDAVgdKLEIIFDSGIRSGADIVKALALGAKMVLI 354
                 7888889999999998899*************************98 PP

>> Glu_synthase  Conserved region in glutamate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.2   7.8e-08    0.0002     271     305 ..     323     357 ..     311     377 .. 0.90

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 7.8e-08
                   -GGG-EEEEESS--SHHHHHHHHHHT-SEEE-SHH CS
  Glu_synthase 271 lrdrvsliadGglktgadvvkalalGAdavgigta 305
                   + d++++i d g+++gad+vkalalGA  v ig+ 
    EPX71483.1 323 VGDKLEIIFDSGIRSGADIVKALALGAKMVLIGRP 357
                   57899***************************986 PP

>> DHO_dh  Dihydroorotate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.2   2.6e-05     0.066     230     279 ..     312     361 ..     275     378 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 2.6e-05
                 HHHHHHHHHHHTTT.S-EEEESS--SHHHHHHHHHHTECEEEESHHHHHH CS
      DHO_dh 230 alkvirelykrlkkeipiIgvGGiesgeDalekieaGAslvqvytalvfe 279
                 +l ++ ++ + + +++ iI   Gi sg D +  +  GA +v ++  +v+ 
  EPX71483.1 312 SLTMLPKIVDAVGDKLEIIFDSGIRSGADIVKALALGAKMVLIGRPYVYG 361
                 67888999999********************************9887774 PP

>> His_biosynth  Histidine biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0     0.074   1.9e+02      81     102 ..     278     299 ..     262     307 .. 0.79
   2 ?   10.9   0.0   8.7e-05      0.22      61     104 ..     312     357 ..     304     365 .. 0.81

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.074
                   SSSSHHHHHHHHHCT-SEEEES CS
  His_biosynth  81 GIrsledveelleagadkviig 102
                   GI+s+ d++++ e+g+d ++++
    EPX71483.1 278 GIQSVADAKKAAEFGIDGIVVS 299
                   8888888888888888887775 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 8.7e-05
                   HHHHHHHHHHH-S..SEEEEESSSSSHHHHHHHHHCT-SEEEESHH CS
  His_biosynth  61 nldlveeiaeevf..ipvqvGGGIrsledveelleagadkviigta 104
                    l+++ +i+++v   +++  ++GIrs  d+ ++l +ga+ v ig  
    EPX71483.1 312 SLTMLPKIVDAVGdkLEIIFDSGIRSGADIVKALALGAKMVLIGRP 357
                   56667777777765588999**********************9965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (407 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       360  (0.0200792); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.50u 0.32s 00:00:00.82 Elapsed: 00:00:00.45
# Mc/sec: 2733.33
//
Query:       EPX71484.1  [L=238]
Description: SNO4 protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.3e-11   43.3   0.0    1.4e-10   41.2   0.0    1.9  1  DJ-1_PfpI  DJ-1/PfpI family
  ------ inclusion threshold ------
      0.028   14.1   0.2       0.27   10.9   0.2    2.5  1  ThiJ_like  ThiJ/PfpI family-like


Domain annotation for each model (and alignments):
>> DJ-1_PfpI  DJ-1/PfpI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.2   0.0   1.6e-14   1.4e-10      12     164 ..      26     234 ..      22     235 .. 0.78

  Alignments for each domain:
  == domain 1  score: 41.2 bits;  conditional E-value: 1.6e-14
                 EHHHHHHHHHHHHHTTEEEEEEESS.............TSEEEETTS....EEEE-SEEGG............GCTCCG-SEEEE--BHHHHHHHHTSH CS
   DJ-1_PfpI  12 edvElivpvdvlkragikvdvvsvd.............keevkgsrG....lkvtvdasld............dvkaaeyDalvlpGGragperlrene 81 
                    El +p++++++ag++vd+ s +             +             +v  d+s +            dv+ ++y +  + GG+a   +l    
  EPX71484.1  26 HFSELLTPYQIFRQAGLDVDITSEKgtckfddvsvdesQ-------LpaeiKNVLHDKSNEfwtainnmkraaDVDYSQYKIFFVAGGHAALFDLPGAI 117
                 5579*******************9999998755544330.......233344555555555777777888888*****************99******* PP

                 HHHHHHHHHHHTT-EEEEETTTHHHH.........HHTTTTTTSEE--SGGGH.HHH..................HHTTSEE-SS......SEEEETTE CS
   DJ-1_PfpI  82 kvvelvkefaekgklvaaICagpqlL.........aaagvlkgrrvTsypavk.dkl..................ekagakyvdk......rvvvdgnl 146
                  +++++ + +++g+++ a+C+gp++L          a ++++gr+vT++ +   + +                  + aga++vd        v +d ++
  EPX71484.1 118 DLQAIAAQIYKNGGIISAVCHGPVILpfisdltrpNASSIVQGRKVTAFNKAGeESMnvldimkqkhlqtmndlfKDAGAHFVDPpkptddFVQSDSRI 216
                 ***********************9995555444444788999999999988763444777888888888888888888888888899998556667779 PP

                 EEESSGGGHHHHHHHHHH CS
   DJ-1_PfpI 147 vTsrgpgaaiefalelle 164
                 vT  +p++a   a++ le
  EPX71484.1 217 VTGVNPQSAASTAKAALE 234
                 999999988877777666 PP

>> ThiJ_like  ThiJ/PfpI family-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.2   3.1e-05      0.27       3      64 ..      22      88 ..      21     157 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 3.1e-05
   ThiJ_like  3 deGydvtevaipwkvlkdagfsveFvtekgk....vpkadekll.sgikakllgaskeakdiYkels 64
                ++G    e+ +p++++++ag  v+  +ekg+      + de+ l   ik+ l   s+e   + +++ 
  EPX71484.1 22 NTGVHFSELLTPYQIFRQAGLDVDITSEKGTckfdDVSVDESQLpAEIKNVLHDKSNEFWTAINNMK 88
                6799999***********************9777756667777756666666655555555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       506  (0.0282224); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 1620.85
//
Query:       EPX71485.1  [L=986]
Description: alpha-glucosidase Agl1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   3.3e-144  481.4   7.3   4.4e-144  480.9   7.3    1.2  1  Glyco_hydro_31   Glycosyl hydrolases family 31
    1.1e-32  112.6   0.0      3e-32  111.2   0.0    1.8  1  NtCtMGAM_N       N-terminal barrel of NtMGAM and CtMGAM, malt
     0.0019   18.5   0.5      0.011   16.1   0.2    2.6  2  Gal_mutarotas_2  Galactose mutarotase-like


Domain annotation for each model (and alignments):
>> Glyco_hydro_31  Glycosyl hydrolases family 31
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  480.9   7.3  7.4e-148  4.4e-144       1     440 []     301     858 ..     301     858 .. 0.95

  Alignments for each domain:
  == domain 1  score: 480.9 bits;  conditional E-value: 7.4e-148
                     EEEE-.SSHHHHHHHHHHHH-------GGGGSEEEE-TT--SHHHHHHHHHHHHHTT--EEEEEESCGGSBTTCCTB-.TTTSS-HHHHHH...H CS
                     xxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...x RF
  Glyco_hydro_31   1 yvflG.ptpkevvkqyteltGrpalpPrwalGfhqsrygykdeeeveevvdkfreagiPldvivlDidymdkrkdftwdkerFpdpkemvd...e 91 
                     yv++G ++p++ + q+ e +G p++ ++w++Gfh++r+gy++ +++++v +++r+ +iP+++++ Didymd+ +dft+d+ ++++ ++m++   +
      EPX71485.1 301 YVYAGsEKPQNTITQFIESIGFPQMHQYWTMGFHMCRWGYENISQIMQVRENMRKFNIPIETFWSDIDYMDSLRDFTVDPISYSQ-EQMIEffhD 394
                     9****999***************************************************************************84.555552227 PP

                     HHHTT-EEEEEE-SEE.E.-T......TSHHHHHHHHTTSBECCCCCS.TCEC.TSSEEEEB-TTSHHHHHHHHHHHHHHHCT........CT-- CS
                     xxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxx.xxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxx........xxxx RF
  Glyco_hydro_31  92 lhekgvklvvivdpaiskqee......eyeafdegkekgvflknkdgs.ykgk.wpgstafpDftnpearewwkkelkkflld........lgvd 170
                     +++ ++++v+ivd+a++++++      +y ++ eg ek+vflkn+dgs y+g+ wpg t+fpDftnp+++++wk+ +++  ++        ++++
      EPX71485.1 395 IESTHQHYVPIVDAAVYAANPsnrsddSYGPYYEGIEKDVFLKNPDGSlYIGEvWPGFTVFPDFTNPKVQDYWKHGIQNMSYAfgsnsssyIPFS 489
                     8778**********999888899999999********************99999********************988887776889999999*** PP

                     EEEE-STTTB.SCCCCHH.HHCCCTS..................................................................... CS
                     xxxxxxxxxxxxxxxxxx.xxxxxxx..................................................................... RF
  Glyco_hydro_31 171 glwiDmnepsnfeegsds.eekeake..................................................................... 195
                     glw Dmneps+f+ gs+  +  ++++                                                                     
      EPX71485.1 490 GLWLDMNEPSSFCVGSCGsNLVNSNPvhppfklpgepddltlnypegfnltnkteyasassaslsqyyatatssmqpvyptavpigqqpkhdinh 584
                     *****************977666666********************************************************************* PP

                     .......................CETTCC.HHHHCCCHHHHHHHHHHHHHHHHTTTST-EEEESSEETTGGGCTEEE--S-BSSHHHHHHHHHHH CS
                     .......................xxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_31 196 .......................tkaags.hydvhnlygllmakatyeglkekkpkkrpfiltRstfaGsqryaahWsGdnassWeslresipal 266
                                            t+++g+  yd+ n+yg+ + k t+++l + +pk rpfil+Rstf+Gs+ y+ahW+Gdn+s+W ++ +si+++
      EPX71485.1 585 ppyainteqgnhdlanhgvspnaTHHDGTlRYDLFNIYGYGEIKVTHKALTDLQPKVRPFILSRSTFLGSGVYSAHWLGDNHSNWPNMFFSISGM 679
                     *******************977555555599**************************************************************** PP

                     HHHHTTT--SEEEECT-SG.HCHHHHHHHHHHHHTTSSSEEE--STTSS--SHHHHCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHH---SEE- CS
                     xxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_31 267 lsfslsGvpfwgaDigGFe.ntteelyaRWvqlGafsPffrnHsskdakrqepwafgeeveeaarkaielRyrLlPylYtlfyeahetglpvvrp 360
                     + f+++Gvp++gaD++GF+ n +eel+aRW+++GafsPf+rnH++ ++++qep+++ + v+e++r+a+++Ry+LlPy+Ytlf++a+ +g++++rp
      EPX71485.1 680 MVFNMLGVPMVGADVCGFQdNADEELCARWMAMGAFSPFYRNHNQLGSIHQEPYLWAS-VAESSRRAMNIRYSLLPYWYTLFRQASYDGSTLIRP 773
                     ******************9888**********************************99.************************************ PP

                     HHHH-TT-CCCCC--S-EEETTTEEE----STT-SEEEEEE-SS...EEEETTT--EEES..SEEEEEE--TTSS-EEEETTEEE CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_31 361 lflefpedektfdiddqfmfGdsLLvaPvleeeatsvevyLPgg...kWydfwtgekyeg..gqtveltapldeiplfvraGaIi 440
                     lf+efp++++++  d+qf++GdsLLv+Pvle+++t+v+ ++Pg+    Wyd+++++ +e   +++ +++apl++i++ +r+++Ii
      EPX71485.1 774 LFFEFPDEPSLAGADRQFLVGDSLLVSPVLEPNTTTVNGVFPGDentVWYDWYNHTAIEHkpYENKTMDAPLEHINVAIRGNKII 858
                     ******************************************66699*******99999954334478899988**********8 PP

>> NtCtMGAM_N  N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.2   0.0     5e-36     3e-32       1     115 [.      77     193 ..      77     194 .. 0.91

  Alignments for each domain:
  == domain 1  score: 111.2 bits;  conditional E-value: 5e-36
  NtCtMGAM_N   1 gltadlklagsacsvygndieelkleveyetddrlrvkItdannkryevpeell..prpssssssssksdnkelevsvtnepFgfkvtRkstgevlfdt 97 
                 g+t +l+l+gs+c  yg+d+++l l+v+y+t++r++v I dan++++e +++    + p  + sss ++ n  +++s++ +pF+f +tRks+gevlfdt
  EPX71485.1  77 GVTGSLELIGSPCYAYGTDYKDLLLNVTYDTEERIHVSIRDANHTQFEFSNRHDiwDAPIYHPSSSVNQFNLLYNFSFNADPFEFWITRKSDGEVLFDT 175
                 6799**********************************************88435655555566667777777************************** PP

  NtCtMGAM_N  98 sggplvfedqflqlstkl 115
                 +g+pl+fedq+++l+t++
  EPX71485.1 176 RGHPLIFEDQYIELTTNM 193
                 ****************86 PP

>> Gal_mutarotas_2  Galactose mutarotase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.2   1.8e-06     0.011       3      49 ..     198     242 ..     196     262 .. 0.85
   2 ?   -3.4   0.0       2.2   1.3e+04       3       9 ..     620     626 ..     609     639 .. 0.72

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.8e-06
                      EEEEEES-SS-SS-TTE.EEEE-----TS-HCC.CTS-SCEEEEEEEE CS
  Gal_mutarotas_2   3 hvyGlGEkagplnlrgt.ryrlwntdafgyeaessdplYgsiPfmisl 49 
                      ++yGl E    l+l +    ++w  d  +   +   ++Yg++Pf+++ 
       EPX71485.1 198 NIYGLAETIHGLRLGNNlTRTFWANDEASPLDQ---NMYGTHPFYLEQ 242
                      89**********9999878899***99976555...*********984 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2.2
                      EEEEEES CS
  Gal_mutarotas_2   3 hvyGlGE 9  
                      ++yG GE
       EPX71485.1 620 NIYGYGE 626
                      4566666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (986 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       422  (0.0235373); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.71u 0.28s 00:00:00.99 Elapsed: 00:00:00.46
# Mc/sec: 6449.92
//
Query:       EPX71486.1  [L=1500]
Description: brefeldin A resistance protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.5e-64  216.1  66.0    6.8e-38  130.2  19.3    2.9  3  ABC2_membrane    ABC-2 type transporter
    6.3e-26   91.5   0.0    1.2e-13   51.8   0.0    2.5  2  ABC_tran         ABC transporter
    8.4e-20   70.5   1.6    2.4e-13   49.8   0.0    4.5  4  PDR_CDR          CDR ABC transporter
  ------ inclusion threshold ------
      0.018   14.3   0.0      0.058   12.6   0.0    1.8  2  Methyltransf_34  Putative SAM-dependent methyltransferase
      0.039   13.8   0.0        8.6    6.1   0.0    2.4  2  AAA_21           AAA domain, putative AbiEii toxin, Type IV T
      0.054   12.8  20.1      0.023   14.0   1.1    2.6  2  ABC2_membrane_2  ABC-2 family transporter protein


Domain annotation for each model (and alignments):
>> ABC2_membrane  ABC-2 type transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.6  31.5   2.2e-31   6.6e-28      11     210 .]     500     700 ..     490     700 .. 0.92
   2 ?   -1.8   0.7      0.57   1.7e+03     130     159 ..     751     781 ..     729     792 .. 0.60
   3 !  130.2  19.3   2.3e-41   6.8e-38       2     208 ..    1151    1363 ..    1150    1365 .. 0.96

  Alignments for each domain:
  == domain 1  score: 97.6 bits;  conditional E-value: 2.2e-31
  ABC2_membrane  11 flqrwrdpslgllwrliqplllalvfgtvfgnlgnsedgl.nrpgllffsvlflafsaltsvapvferergvlerelvsplyslsayvlakvlvel 105
                    +  +++d s   l+ +++ +++++++g++f++++ns+  l +r  +l   ++f+a++++++v  ++ ++++++ ++    ly +sa +++++++e+
     EPX71486.1 500 YFHYLHDYSFH-LTFIFSYIFQGFMLGSIFYQIQNSSATLySRGSVLSAGIIFTAIQTMSEV-DIILMKKSLFSEHQIQCLYQPSATLFGSTIIEF 593
                    55666777666.888999****************6666665**************9******.**********999999999************** PP

  ABC2_membrane 106 pvsllqalifllivyflvgldls..rfflflllllltalaasslgllisalapsfedasqlaslvllpllllsGffipidsm.pkwlqwiaylnPl 198
                    p+ l+++ +f +i yfl+gl+++  +ff f+l+++l++ ++ s++++i+ l++++e a+++++l  + ++ ++G ++pi  +   w++w++y+nP+
     EPX71486.1 594 PLRLIFVCMFDIILYFLTGLRVNagAFFTFFLFTVLITYCMASIFRFIALLSTTAEIAAFIGGLAAIYFIAFCGSVMPIFYIgW-WFRWLSYANPI 688
                    ***********************9999*******************************************************55.*********** PP

  ABC2_membrane 199 tyavealrsnlf 210
                     y++e+++ n+f
     EPX71486.1 689 QYGYESVMLNEF 700
                    ********9987 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.57
  ABC2_membrane 130 f.flflllllltalaasslgllisalapsfe 159
                    f +  + ++l ++++++ l+l+++ + ++ +
     EPX71486.1 751 FlWRNCGIILGFSIFILLLSLVLANFIVYDR 781
                    4444555666666666666666666555544 PP

  == domain 3  score: 130.2 bits;  conditional E-value: 2.3e-41
  ABC2_membrane    2 qikallkreflqrwrdpslgllwrliqplllalvfgtvfgnlgnsedglnrpgllffsvlflafsaltsvapvferergvl.erelvsplysls 94  
                     q++ ++kr+f+++wrd++l+ ++rl++ +l +l++g++f+++gn  ++ ++ ++ + +++  ++s++ +++p f++ r v+ ++e +s  ys+s
     EPX71486.1 1151 QTYKIMKRNFILYWRDSTLL-MSRLAFNILAGLLIGFAFYKQGNGVQRTQNKMFSAYMLTIASTSFVNGLIPKFIYLRDVYeYHEENSAAYSRS 1243
                     667799***********999.********************9999999999******************************************* PP

  ABC2_membrane   95 ayvlakvlvelpvsllqalifllivyflvgldls......rfflflllllltalaasslgllisalapsfedasqlaslvllpllllsGffipi 182 
                     a++la +++e++++++++++f+l++y++ g++l+       +++++l+++++al+ +s+g+ i++++ps+ +as+l++  +++  ++ G++  +
     EPX71486.1 1244 AFILAFFITEAVINCCFGTLFFLCWYYPSGFYLDghntpfYGGYAWLIMMAFALYYTSFGIGIATVSPSVGTASLLSGTAFVFVQYFNGMVQVP 1337
                     **********************************99874444**************************************************** PP

  ABC2_membrane  183 dsmpkwlqwiaylnPltyavealrsn 208 
                     +++ ++++w+  l+P++y++e++ +n
     EPX71486.1 1338 SQLVGFWKWMNALSPYKYFLEGMNGN 1363
                     ***88*****************9766 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.3   0.0   1.2e-12   3.5e-09       6     135 ..     174     323 ..     169     325 .. 0.90
   2 !   51.8   0.0   3.9e-17   1.2e-13       1     136 [.     856    1006 ..     856    1007 .. 0.90

  Alignments for each domain:
  == domain 1  score: 37.3 bits;  conditional E-value: 1.2e-12
                 EEEETTSEEEEEESTTSSHHHHHHHHTTSS--...SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH.................HHHTC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.................xxxxx RF
    ABC_tran   6 lklkegekvaivGenGaGKStLlkllagllkp...teGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren.................esdee 84 
                   l +g  + ++G+ G+G   Llk+l+g +++    eG+++++g d ++  ++++r  +++ + +++   +++vr+                   ++e 
  EPX71486.1 174 AVLDPGAFLLVIGHEGSGAHNLLKVLSGVVEKnetLEGSLTYNGLDYHT-MHSQYRTDLSYHTDDHSSIATISVRRLlefvcacrlpevkrdgvSRQET 271
                 5688999**********************99977779*******99999.99********************99999**********999999877777 PP

                 HHHHHHHSTTGGTTCBGESTTS.GGS-HHHHHHHHHHHHHHHTSSEEEEEST CS
                 xxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  85 iekalsklglkelkdtvvkssp.ssLSgGqkqrvalarallkkpkllllDEp 135
                 i+k+ + +++    ++  +++  +  SgG+++r+++a++++ +p + ++D+ 
  EPX71486.1 272 IQKICELMRDAFELNQYYDQRIfEIRSGGEQKRISIAETMCARPLFQCWDNT 323
                 99999999999988888888875777********************999975 PP

  == domain 2  score: 51.8 bits;  conditional E-value: 3.9e-17
                  EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--..SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH................ CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................ RF
    ABC_tran    1 lknvslklkegekvaivGenGaGKStLlkllagllkp..teGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren................ 79  
                  lkn++  +k+g  +a++Gen +GKS L+k+l++       eGe++l+g   k+     lrk+ig+++ ++ + p++tvre+                
  EPX71486.1  856 LKNLNGFVKPGCFMALLGENKSGKSVLIKILSQRGVAgiVEGEVTLNGIRNKK----YLRKRIGYVSNKQIFVPQYTVRETlrlhaslrqsgavsis 948 
                  799999*************************9887766699999999766555....9***************************999988888655 PP

                  HHHTCHHHHHHHSTTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHTS.SEEEEESTT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxx RF
    ABC_tran   80 esdeeiekalsklglkelkdtvvksspssLSgGqkqrvalarallkkp.kllllDEpt 136 
                  e+ + ++++++ lgl ++++ ++++++  LS  +k+   +   l+ +p ++lllDEp 
  EPX71486.1  949 ERYKYVDEVIDFLGLYDVAKFIIGDEGGGLSLYHKKLTGIGIELVARPgSVLLLDEPA 1006
                  55555***********************************9888877758*******7 PP

>> PDR_CDR  CDR ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   2.1       2.5   7.4e+03      49      70 ..     616     637 ..     611     653 .. 0.65
   2 !   49.8   0.0   8.1e-17   2.4e-13      10      85 ..     716     791 ..     710     797 .. 0.91
   3 ?    0.2   1.1      0.24   7.3e+02      33      66 ..    1224    1259 ..    1192    1270 .. 0.66
   4 !   29.5   0.4   1.7e-10   5.2e-07      37      87 ..    1426    1476 ..    1421    1481 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 2.5
     PDR_CDR  49 nfgiliaflifflalyllatel 70 
                 n g  + f++f ++++ +++++
  EPX71486.1 616 NAGAFFTFFLFTVLITYCMASI 637
                 5566666666666555555544 PP

  == domain 2  score: 49.8 bits;  conditional E-value: 8.1e-17
     PDR_CDR  10 vseenrvCavvGavpGqeyVsGddYlelsfgyssshlwrnfgiliaflifflalyllatelisaekskgevlvfkr 85 
                  s +n++C +  +++G  ++ G++Yl++ f+y+ss lwrn gi+++f if l+l l+++++i   +s++ +  f+ 
  EPX71486.1 716 FSLKNNICPSPSSIAGIPNIIGTKYLSTVFQYKSSFLWRNCGIILGFSIFILLLSLVLANFIVYDRSSSAIPEFQM 791
                 56799*********************************************************99999988877765 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.24
     PDR_CDR   33 dYlelsfgyssshlw...rnfgiliaflifflalyll 66  
                  +Yl+  ++y++++ +   r   i +af+i   +++++
  EPX71486.1 1224 IYLRDVYEYHEENSAaysRSAFI-LAFFITEAVINCC 1259
                  699******99997755433333.3444444444443 PP

  == domain 4  score: 29.5 bits;  conditional E-value: 1.7e-10
     PDR_CDR   37 lsfgyssshlwrnfgiliaflifflalyllatelisaekskgevlvfkrgk 87  
                  ++fgy+++h+wrnfgili++++f l + +++ e+i++   +    +f r++
  EPX71486.1 1426 ANFGYYYHHRWRNFGILIGYAAFNLGFAIVIYEIIRSIPFHRFLSLFIRKR 1476
                  58********************************99877766666666665 PP

>> Methyltransf_34  Putative SAM-dependent methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   1.9e-05     0.058     195     243 ..     143     192 ..      90     205 .. 0.89
   2 ?   -2.6   0.0      0.82   2.4e+03     128     171 ..     436     478 ..     426     484 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.9e-05
  Methyltransf_34 195 kpalvtllFtlnELftes.iskttkfLlrltaalkkgslLLvvdSpGsys 243
                      ++ l  l++ ln Lf+ + + +t+ +++++ a+l++g++LLv+   Gs +
       EPX71486.1 143 TSLLDQLMYPLNVLFSRKpKRDTIPLIKEFDAVLDPGAFLLVIGHEGSGA 192
                      5666789***********9************************9998855 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.82
  Methyltransf_34 128 lvDiadWssvvkkLekaitsepllskyasaaaaanaplleeerl 171
                       +++ d++++v+++++  + +  +s+ +++ +a+n+p+++ +r+
       EPX71486.1 436 WLESEDYARLVSDIDQYTEYHSDVSAFRTK-DASNTPIVKWKRF 478
                      578999***************999998884.4599999988776 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0    0.0029       8.6       1      21 [.     868     888 ..     868     943 .. 0.75
   2 ?    5.1   0.0    0.0056        17     254     296 ..     994    1035 ..     982    1039 .. 0.64

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0029
      AAA_21   1 lnvliGpNgsGKSnLLdaldl 21 
                 +++l G N sGKS L+++l+ 
  EPX71486.1 868 FMALLGENKSGKSVLIKILSQ 888
                 689****************53 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.0056
      AAA_21  254 alkkgsllliDEpEngLHPkllrrllellkelsrngaQviltT 296 
                  a++  s+ll+DEp +gL+ +    l+  l++l++ g  +i++T
  EPX71486.1  994 ARPG-SVLLLDEPASGLDSQSAWMLIATLRKLANAGLSIICST 1035
                  4444.************98333222233333334456666665 PP

>> ABC2_membrane_2  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2  11.8     0.015        44     138     271 ..     597     753 ..     584     782 .. 0.71
   2 ?   14.0   1.1   7.7e-06     0.023     116     247 ..    1242    1358 ..    1237    1458 .. 0.58

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.015
  ABC2_membrane_2 138 llatvllalaiilalgivlaledllllvvasvlllllvvflalglllSsvarssreaaalalglfvvlailvpivlygvaellagpavpqeind 231
                      l+ + ++ +++    g  +++++++++++++vl+    ++++++ +++ ++  ++e aa   gl ++ +i++ +++ ++ ++            
       EPX71486.1 597 LIFVCMFDIILYFLTGLRVNAGAFFTFFLFTVLITY--CMASIFRFIALLST-TAEIAAFIGGLAAIYFIAFCGSVMPIFYI----------GW 677
                      5556677888889999999*************7777..9********99998.55555555555555557777777554443..........44 PP

  ABC2_membrane_2 232 flsllsptsayntllneilagsdlna.............................................lgstatnllillll 271
                       +++ls++++++++++++  ++  n+                                             +         + l+
       EPX71486.1 678 WFRWLSYANPIQYGYESVMLNEFKNTiykcssiipnlqfslknnicpspssiagipniigtkylstvfqykS---------SFLW 753
                      6899***************99987778888888888888888888888887777777777774444444441.........3333 PP

  == domain 2  score: 14.0 bits;  conditional E-value: 7.7e-06
  ABC2_membrane_2  116 RdeillgKfigglaiglaiavallatvllalaiilalgivlaledllllvvasvlllllv..vflalglllSsvarssreaaalalglfvvl 205 
                       R++ +l+ fi  ++i          ++l++l +   +g  l++ +  +    ++l+++++   ++++g+++++v+ s  +a +l+   fv+ 
       EPX71486.1 1242 RSAFILAFFITEAVI------NCCFGTLFFLCWYYPSGFYLDGHNTPFYGGYAWLIMMAFalYYTSFGIGIATVSPSVGTASLLSGTAFVFV 1327
                       555555555555555......3333444455555555555555555554444444333334589**************************** PP

  ABC2_membrane_2  206 ailvpivlygvaellagpavpqeindflsllsptsayntlln 247 
                       + + ++v  +            ++  f ++++  s+y++ l+
       EPX71486.1 1328 QYFNGMVQVP-----------SQLVGFWKWMNALSPYKYFLE 1358
                       ***9999844...........223334445555555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1500 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       866  (0.0483016); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.09u 0.34s 00:00:01.43 Elapsed: 00:00:00.55
# Mc/sec: 8140.24
//
Query:       EPX71487.1  [L=349]
Description: NADP-dependent oxidoreductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.2e-22   78.5   0.0    7.1e-22   77.8   0.0    1.4  1  ADH_zinc_N    Zinc-binding dehydrogenase
    1.9e-16   59.9   0.1    4.1e-16   58.8   0.0    1.6  2  ADH_N_2       N-terminal domain of oxidoreductase
    1.9e-07   32.2   0.0    3.7e-07   31.3   0.0    1.5  1  ADH_zinc_N_2  Zinc-binding dehydrogenase


Domain annotation for each model (and alignments):
>> ADH_zinc_N  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.8   0.0   1.2e-25   7.1e-22       1     121 [.     172     300 ..     172     310 .. 0.85

  Alignments for each domain:
  == domain 1  score: 77.8 bits;  conditional E-value: 1.2e-25
                 HHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTESEEEETTTCHHHHHHHHHTTTSSEEEEEESSCSHHHHHHHHHCEEEEEEEEECSC..TSSEEE. CS
  ADH_zinc_N   1 gvGlaavqlAkalGaeviavdsseeklelakklGadevinykeadlverikeltggegvdvvfecvGsgatleaalkllkpgGrlvvvGg..gkgeee. 96 
                 +vG+ + qlAka+G  v++ ++s+ek++ +k++G d+v+nyk++++ e++ + + ++g+d++fe vG g+tl+a l  ++ + r+ ++G      +++ 
  EPX71487.1 172 AVGQVVGQLAKAMGLYVVGSAGSDEKIAHLKEIGYDAVFNYKKESVHEALPRVC-PKGIDIYFENVG-GETLDAVLLNANFHARIIFCGCisQ-YNNPn 267
                 69***************************************6669*********.99**********.**********************743.33335 PP

                 ....EEHHHHHHTT-EEEEE-SSC.....HHHHH CS
  ADH_zinc_N  97 ....fdlrnlllkeksilGsllgs.....lreef 121
                      + +++l k++++ G+++ +       ee+
  EPX71487.1 268 pyglKNYSQILTKSIKVEGFIVMNlmplyQ-EEY 300
                 88855555588************9777742.333 PP

>> ADH_N_2  N-terminal domain of oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.8   0.0   6.9e-20   4.1e-16      31     104 ..      44     119 ..      22     123 .. 0.87
   2 ?   -3.5   0.1       1.7     1e+04      69      90 ..     171     190 ..     168     198 .. 0.55

  Alignments for each domain:
  == domain 1  score: 58.8 bits;  conditional E-value: 6.9e-20
     ADH_N_2  31 GevlvralylSvDPymRgrmnd..aksyvepvelgdvmrggavgeVveSknpdfkvGdlVvgllgwqdyavsdgkg 104
                   +l+r+ y S+DPy+R+rm++   ksy++ + +++v+   +++eVv+S  p+ k+G++V+ ++gw++y+++ ++ 
  EPX71487.1  44 HPLLLRNIYTSIDPYIRIRMQNpkYKSYLPSLGINQVIPNLTLAEVVKSAVPEHKTGSHVIFMSGWEEYTLVPKQA 119
                 4589****************963379********************************************997765 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 1.7
     ADH_N_2  69 gavgeVveSknpdfkvGdlVvg 90 
                 gavg+Vv   ++  + G +Vvg
  EPX71487.1 171 GAVGQVVGQLAK--AMGLYVVG 190
                 566666644333..34555555 PP

>> ADH_zinc_N_2  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.3   0.0   6.2e-11   3.7e-07       2     130 ..     205     341 ..     204     343 .. 0.74

  Alignments for each domain:
  == domain 1  score: 31.3 bits;  conditional E-value: 6.2e-11
                   T-SEEEETTSTTHH...HHH-TT-EEEEEES-HHHHH.HHHHHHE..EEEEEEEE--.--............S-EEE-CHHHCTTT-EEEE--GGG. CS
  ADH_zinc_N_2   2 GAdevidyrtedfe...aatggegvDvvldtvggealleaslkvl..pggGrlvsig.gpp...........lsaallkpakkrkgrsvkyeflfsm 81 
                   G d v++y++e+++     ++++g+D+ +++vgge+l +a+l  l  + ++r++  g   +                  ++k  k  ++ +  l  m
    EPX71487.1 205 GYDAVFNYKKESVHealPRVCPKGIDIYFENVGGETL-DAVL--LnaNFHARIIFCGcI-SqynnpnpyglkN--YSQILTKSIKVEGFIVMNL--M 293
                   89***********999956679*************99.8887..443555999777632.2356666654221..2222222122233333333..3 PP

                   ..-.-HHHHHHHHHHHHHHH----EEEEEEGGGHHHHHHHHHSS--SSE CS
  ADH_zinc_N_2  82 kasaqadileelaalieeGklrpvvdrvfpleeaaeAhrylesgrarGK 130
                     + q++ ++e+ +li+eGkl+   d  ++l  ++e + ++ +g  +GK
    EPX71487.1 294 PLY-QEEYFREMPKLIAEGKLKYKYDVYMGLGSIPEGFLAVLQGNNFGK 341
                   455.9999******************77********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (349 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       313  (0.0174578); expected 358.6 (0.02)
Passed bias filter:                      291  (0.0162307); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.37s 00:00:00.97 Elapsed: 00:00:00.55
# Mc/sec: 1909.75
//
Query:       EPX71488.1  [L=223]
Description: phosphoglycerate mutase family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.6e-21   74.9   0.0    7.3e-21   74.8   0.0    1.1  1  His_Phos_1     Histidine phosphatase superfamily (branch 1)
  ------ inclusion threshold ------
       0.11   13.2   0.5       0.27   12.0   0.5    1.5  1  S8_pro-domain  Peptidase S8 pro-domain
       0.15   12.1   0.1       0.25   11.4   0.1    1.3  1  DUF1877        Domain of unknown function (DUF1877)


Domain annotation for each model (and alignments):
>> His_Phos_1  Histidine phosphatase superfamily (branch 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.8   0.0   1.2e-24   7.3e-21       1     155 [.      13     177 ..      13     217 .. 0.89

  Alignments for each domain:
  == domain 1  score: 74.8 bits;  conditional E-value: 1.2e-24
                 EEEEE---BTTB--.....TT----B-HHHHHHHHHHHHHHTT..S---EEEE-SSHHHHHHHHHHHHCTT....--EEE-GGGS----GGGT...T-B CS
  His_Phos_1   1 lyLvRHGetewnaegr.lqgrtdvpLteeGreqAealaerlag..epidaiysSplkRarqTaeliaealg....lpveldegLrEidfGdwe...glt 89 
                 +y++RHG +++++++  + + +d+ L+ eG++qAe++   l++   pi+ i++Spl+Ra++T++++ +       lpv++ + L++   Gdwe   g +
  EPX71488.1  13 IYFLRHGLVDHKTDEEgVHRDHDPMLNHEGIKQAEQARVQLRDakLPIEIIFCSPLRRAIETMQIAFQDYIfedhLPVKILPTLQD--CGDWEcnvGSP 109
                 8**********777777*************************9889999****************9998778899*********98..9****999*** PP

                 .HHHHHH..HSHHHHHHHHH-GGG-BS-BHHHHHHHHHHHHH..HHHHHTTTSEEEEEE-HHHHHHHH CS
  His_Phos_1  90 taeiaeeypeeleawlrdpadvrppggEsledvaaRvaaale..elaarhegetvlvVsHggvirall 155
                   e+++++p++      +++ ++ ++g   +d+   v+++ +  e  ar +++  +vV+Hg +ir+++
  EPX71488.1 110 VPELEQQFPRFDFSACYEDKVYPRKEGIHKADFETSVKKTEQlaEYFARIPQKSFAVVTHGVCIRLFC 177
                 **********99999999988888889999999888877644448999999999***********986 PP

>> S8_pro-domain  Peptidase S8 pro-domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.5   4.5e-05      0.27      33      76 ..      11      54 ..       4      56 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 4.5e-05
  S8_pro-domain 33 eghYlfrh.sepkkrskrslrhkreerLakdpkVkwaeqqevlkR 76
                   +  Y++rh   ++k + +++++  ++ + +++ +k aeq +v  R
     EPX71488.1 11 KTIYFLRHgLVDHKTDEEGVHRD-HDPMLNHEGIKQAEQARVQLR 54
                   689*****555566666666655.99**************99877 PP

>> DUF1877  Domain of unknown function (DUF1877)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   4.2e-05      0.25     112     164 ..     119     168 ..     112     169 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 4.2e-05
     DUF1877 112 rfdaeeleeaeiYpniweeeeeededleylleyfeelkeFykkaakagkavlv 164
                 rfd +++ e ++Yp+   +e   ++d+e   +  e+l e+++++ ++  av++
  EPX71488.1 119 RFDFSACYEDKVYPR---KEGIHKADFETSVKKTEQLAEYFARIPQKSFAVVT 168
                 89************9...4468999******************9998888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (223 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       337  (0.0187964); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.34s 00:00:00.92 Elapsed: 00:00:00.54
# Mc/sec: 1236.89
//
Query:       EPX71489.1  [L=43]
Description: hypothetical protein SOCG_01706 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-20   73.1   7.3    1.6e-20   72.9   7.3    1.0  1  M-factor  M-factor


Domain annotation for each model (and alignments):
>> M-factor  M-factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.9   7.3     9e-25   1.6e-20       1      43 []       1      43 []       1      43 [] 0.98

  Alignments for each domain:
  == domain 1  score: 72.9 bits;  conditional E-value: 9e-25
    M-factor  1 MDsm.AnnssSSSlvNaannkPtetvtkgvknYtPKvPyMCvIA 43
                M sm  +n sSSSl+N+ ++kPt t t+g+ +Y+PK+P+MCvIA
  EPX71489.1  1 MESMnNTNASSSSLMNNTPSKPTLT-TSGAHWYQPKPPAMCVIA 43
                99**999******************.*****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (43 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       245  (0.013665); expected 358.6 (0.02)
Passed bias filter:                      155  (0.00864521); expected 358.6 (0.02)
Passed Vit filter:                         7  (0.000390429); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.32s 00:00:00.81 Elapsed: 00:00:00.52
# Mc/sec: 249.79
//
Query:       EPX71490.1  [L=1079]
Description: alpha-mannosidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.9e-86  290.0   0.0    3.2e-86  289.3   0.0    1.3  1  Glyco_hydro_38N  Glycosyl hydrolases family 38 N-terminal dom
    3.7e-54  184.0   0.0    5.5e-54  183.5   0.0    1.3  1  Glyco_hydro_38C  Glycosyl hydrolases family 38 C-terminal dom
      2e-24   85.6   0.0    4.3e-24   84.5   0.0    1.6  1  Alpha-mann_mid   Alpha mannosidase middle domain
    1.7e-16   60.1   0.1      5e-16   58.6   0.1    1.9  1  Glyco_hydro38C2  Glycosyl hydrolases family 38 C-terminal bet


Domain annotation for each model (and alignments):
>> Glyco_hydro_38N  Glycosyl hydrolases family 38 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  289.3   0.0   7.2e-90   3.2e-86       1     284 [.     284     546 ..     284     551 .. 0.95

  Alignments for each domain:
  == domain 1  score: 289.3 bits;  conditional E-value: 7.2e-90
                      EEEEEEEEE--SSSSS-HHHHHCCTCHHHHHHHHHHHHHSTT--EEES-CHHHHHHHCCS-CCCHHHHHHHHHCTSEEECTT-SS-B-SSSS-H CS
  Glyco_hydro_38N   1 kvhvvpHsHiDvgWlktvdeyqrrkvqrilssvlellerdpdrkFilseaslferwweeapeekkelvkklvaegrlevvgGgwvenDealpsg 94 
                      kv++v+H+HiD++Wl++++e+ rrk+ r++ ++l+ll+r+p+++F++s+a+++e++++++p ++++l kk v+++++ +vgG+wve+D++lp g
       EPX71490.1 284 KVYAVGHCHIDTAWLWPFAET-RRKIVRSWATQLNLLDRYPEYRFVCSQAQQYEWLKQDHPRTYERL-KKHVKSRQFLPVGGSWVEHDTNLPCG 375
                      79*******************.*********************************************.************************** PP

                      HHHHHHHHCCCHHHHCCH--EESEEEESSSSSB-TCHHHHHHCTT--EEEESSS-HHCHCCHHHTT-SCEEEE-TTSTEEEEEE--TT.SSHCC CS
  Glyco_hydro_38N  95 eslirqlleGqrflkeefgvrpkvaWliDpFGysatlPqllkkaGidsfltqrlsyndknkfaeqkhlefiWrgsdgteilthmlpadsydpty 188
                      eslirq+l Gqrf+++ef vr++++Wl+D+FGys+++Pq+++ aG+d+fltq+ls++++n+f   +h++f+W + dg+++l+hm+pad    ty
       EPX71490.1 376 ESLIRQFLFGQRFFQDEFDVRCDTFWLPDTFGYSSQIPQICRLAGMDRFLTQKLSWSNINSF---PHSTFNWVALDGSQVLCHMPPAD----TY 462
                      **************************************************************...**********************9....89 PP

                      CCCC.GGGTTTHHHCHHHHHHCHHHHHTTSSSSEEEEEECEETHCCCCHHHHCCHHHHHHHHHHC....SSEEEEC--H.HHHHHHHHHHS... CS
  Glyco_hydro_38N 189 gfqfdfkrdenvkeraekllaqvkklaektrtnevllplGddfadgqggnteklleeinrsneke....slpkvqfgtp.seYfdalekenaef 277
                      +++           ++ +++++v +++++++++  ll++G +  dg+gg+t ++le+++r++        lp++++g   +++fd + k++++ 
       EPX71490.1 463 TADT----------NVTDIIHSVFQHKNLANDQAGLLVFGIG--DGGGGPTPEMLEKLRRCKGVAntigQLPEIKLGDSvDDFFDGVFKRTSN- 543
                      9999..........****************************..****************98843356689*****9876********95443. PP

                      HCE-ESS CS
  Glyco_hydro_38N 278 ptkdsdd 284
                          + +
       EPX71490.1 544 ----AAT 546
                      ....333 PP

>> Glyco_hydro_38C  Glycosyl hydrolases family 38 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  183.5   0.0   1.2e-57   5.5e-54       8     214 .]     731     939 ..     724     939 .. 0.96

  Alignments for each domain:
  == domain 1  score: 183.5 bits;  conditional E-value: 1.2e-57
                      EEE.TTTSSEEEEESTTTS-EEE...EEE......EEEEEEEECS-S-SSS--BSTT-EEEE--.S-EEECEE-SS-EEEEEEETTES...EEE CS
  Glyco_hydro_38C   8 veidaknGtlksiydkeakrevlkeqvgn......qfaayedapdssdaydfkpdneekplevsekeveviesgplvaevtvkfkieaestisq 95 
                      v+i +k+G++ si+d  ++revl+ + g+      q+++ +d+p s+ a+d++ ++ +k+  +++ + ++ e gp +a+v v++ i+++s+i++
       EPX71490.1 731 VRI-SKSGLIMSIHDFYNDREVLDLKTGInktganQYVLLQDTPLSFPAWDTEIYSLDKYSILTDGKAQIYETGPTKASVLVETPISEKSSIKT 823
                      889.99*****************996565678888*********************************************************** PP

                      EEEEE.....ECCCCEEEEEEEE-TTECEEEEEEEE---TTCEEEEETTTCEEEEESSTTTT...S..SEGGGG-EEESSEEEEE-SSEEEEEE CS
  Glyco_hydro_38C  96 eirLy.....kgkkriefevkvdweekevllkvafpidiqaefatdengfgvikRptdqntsweaakfeviagnyypiqsfvdlqdesygvavl 184
                      +i++       + ++i+f+++vdw+e  ++lkv+fp+di+ae  ++e++fg++ Rpt++ntsw+ akfev      ++++f+d++d +ygv++l
       EPX71490.1 824 VISISgfnndDDASSIDFSCEVDWHEDYKFLKVEFPVDIHAEYVSYETQFGITHRPTHYNTSWDVAKFEV------CHHKFADYSDYNYGVSIL 911
                      ********99999*********************************************************......****************** PP

                      ECS-EEEEE-SSTTEEEEEEEEEBSSS-TT CS
  Glyco_hydro_38C 185 ndskyGvssleqggqleLsLlRrplypdpr 214
                      nd+kyG+s+  +g+ ++LsLlR+p++pd++
       EPX71490.1 912 NDCKYGFSV--HGNLMRLSLLRSPKQPDAH 939
                      *********..9****************85 PP

>> Alpha-mann_mid  Alpha mannosidase middle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.5   0.0   9.7e-28   4.3e-24       1      96 []     557     654 ..     557     654 .. 0.97

  Alignments for each domain:
  == domain 1  score: 84.5 bits;  conditional E-value: 9.7e-28
                     EE--GGGTSSCHHHHHHHHHHHHHHHHHHHCCTTT..-SCGC-HHHHHHHHHHHHHHHTCTTTTTT-S-HHHHHHCCHHHHHHHHHHHHHCCCCC CS
  Alpha-mann_mid   1 elhrgtfTSrarlKrlnrkleslLraaellssaaa..skgyeypkeeleelwkalllnqfHDilpGtsieeVyedaeerlaealkelekllesal 93 
                     e+hrgt+T+++++K  +rk+e  L+++e++++ a+  + g++yp  e++elwk+ ll+qfHD+lpG++ie+Vy+da + ++++++  e l+++ l
      EPX71490.1 557 EFHRGTYTTQSEIKSSMRKAEFSLHDLEYFATLAFvrIPGFKYPVREINELWKTTLLCQFHDVLPGSCIEMVYKDAIPMMHNVFRSSELLIKAIL 651
                     79******************************777899*****************************************************9999 PP

                     CCC CS
  Alpha-mann_mid  94 rkL 96 
                     ++L
      EPX71490.1 652 EQL 654
                     987 PP

>> Glyco_hydro38C2  Glycosyl hydrolases family 38 C-terminal beta sandwich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.6   0.1   1.1e-19     5e-16       1      69 []     998    1076 ..     998    1076 .. 0.93

  Alignments for each domain:
  == domain 1  score: 58.6 bits;  conditional E-value: 1.1e-19
                       TEEEEEEEE-TTT--EEEEEEESSSSSBEEE-EETT..SCEEEEE-TTSSB-............-TTSEEXTTXEEEEE CS
  Glyco_hydro38C2    1 nvhlltlkkaededdlllRlynlseegedatlslsqp.vksvnvknllEttlape.........eleielkPmEIrTfi 69  
                       n++++++kkaeded+++lRly++ +++++++l+l ++ +ksv ++n+lE+++a+           ++ielk +EI++f+
       EPX71490.1  998 NIIVSNVKKAEDEDAIILRLYESLGGRSRCRLTLKNCdIKSVTKCNILEEDIAQVnlqndeegcHIQIELKAFEIASFK 1076
                       799*********************************9***************43366667789**************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1079 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       538  (0.0300073); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.93u 0.34s 00:00:01.27 Elapsed: 00:00:00.56
# Mc/sec: 5821.60
//
Query:       EPX71491.1  [L=370]
Description: dihydrodiol dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.6e-18   65.9   0.1      9e-18   65.2   0.1    1.3  1  GFO_IDH_MocA   Oxidoreductase family, NAD-binding Rossmann fo
    3.8e-06   27.4   0.0    7.9e-06   26.4   0.0    1.5  1  F420_oxidored  NADP oxidoreductase coenzyme F420-dependent


Domain annotation for each model (and alignments):
>> GFO_IDH_MocA  Oxidoreductase family, NAD-binding Rossmann fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.2   0.1     1e-21     9e-18       1     117 [.      13     139 ..      13     142 .. 0.88

  Alignments for each domain:
  == domain 1  score: 65.2 bits;  conditional E-value: 1e-21
                   EEEEEETTSHH....HHHHHHHHHHTTTTEEEEEEECSSH.HHHHHHHHHTTHE.....EESSHHHHHTCTTESEEEE-S-GGGHHHHHHHHHHTT- CS
  GFO_IDH_MocA   1 lrvaiiGaGki....gskhlrplnesqrleevvalldpda.eraeavaesfgve.....aysdleelladpeidavivatpngtheelakaaleagk 87 
                   lr+++ G+G+i    + + +r+ +++++++e+va+  +++ era a+ae ++       ay ++eel++d ++d+v++  +  +h++ +k al agk
    EPX71491.1  13 LRWGFLGTGNIavafANDLVRAPQHHKHQHEIVAVATRNSvERAAAFAEGYKNGnsspkAYGSYEELVQDINVDIVYISNHHPQHFDTVKIALHAGK 109
                   699********7777777788888888888999999887648888887777666667889999********************************** PP

                   EEEEESSS-SSHHHHHHHHHHHHHHTS-EE CS
  GFO_IDH_MocA  88 hvllEKPlattveeakelvelaekkgklvs 117
                    vl+EKP+++++ e  elvela++k++ ++
    EPX71491.1 110 GVLCEKPFTMNYPESLELVELAREKKVFFA 139
                   *************************98766 PP

>> F420_oxidored  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   0.0   8.8e-10   7.9e-06       3      78 ..      16     101 ..      14     112 .. 0.80

  Alignments for each domain:
  == domain 1  score: 26.4 bits;  conditional E-value: 8.8e-10
                    EEETTSHHHHHHHHHHHHTTS...-GGCEE.EEEESSCCCHHHHHHHHC.....-EEECECHHHHHH..H-SEEEE-S-HHHHHHHH CS
  F420_oxidored   3 giiGaGnmgealasgllaaga...qpheiv.vansrnpekaeelaeelg.....vkvtavdneeaae..eadvvvlavkpedveevl 78 
                    g++G+Gn++ a+a+ l++a +   ++heiv va++++ e+a+++ae ++     +k+ + ++ee+++  + d+v ++ +  ++ +++
     EPX71491.1  16 GFLGTGNIAVAFANDLVRAPQhhkHQHEIVaVATRNSVERAAAFAEGYKngnssPKAYG-SYEELVQdiNVDIVYISNHHPQHFDTV 101
                    9******************9998867777636777788**********99999999999.99****977788888776655555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (370 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       458  (0.0255452); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.35s 00:00:01.01 Elapsed: 00:00:00.57
# Mc/sec: 1963.10
//
Query:       EPX71492.1  [L=340]
Description: flavonol reductase/cinnamoyl-CoA reductase family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.6e-23   81.6   0.2      3e-22   79.3   0.2    2.0  1  Epimerase        NAD dependent epimerase/dehydratase family
    6.1e-18   64.8   0.0    1.2e-17   63.8   0.0    1.5  1  3Beta_HSD        3-beta hydroxysteroid dehydrogenase/isomeras
    1.2e-15   57.8   0.0    2.1e-15   56.9   0.0    1.5  1  GDP_Man_Dehyd    GDP-mannose 4,6 dehydratase
    3.7e-14   52.5   0.1    5.4e-13   48.7   0.1    2.0  1  NAD_binding_4    Male sterility protein
    1.6e-09   37.9   0.0    5.9e-09   36.1   0.0    1.9  1  NAD_binding_10   NAD(P)H-binding
    1.7e-07   30.9   0.0     0.0013   18.3   0.0    2.4  2  adh_short        short chain dehydrogenase
    4.7e-07   29.2   0.1      8e-07   28.5   0.1    1.3  1  Polysacc_synt_2  Polysaccharide biosynthesis protein
    0.00012   21.7   0.3    0.00057   19.5   0.2    2.1  2  NmrA             NmrA-like family
  ------ inclusion threshold ------
      0.013   15.5   0.1      0.075   12.9   0.1    2.1  1  KR               KR domain


Domain annotation for each model (and alignments):
>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.3   0.2   1.5e-25     3e-22       1     232 [.       7     257 ..       7     263 .. 0.77

  Alignments for each domain:
  == domain 1  score: 79.3 bits;  conditional E-value: 1.5e-25
                 EEEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC.........EEEE--TT-HHHHHHHHHHHT-SEEEE--S---HHHHHHSHHHHHHH CS
   Epimerase   1 ilVtGatGfiGsalvkallekgyevigldrlssasntarledl.........elveldltdrsalerlfkeeqpdavihlAavggvaassedpadfiek 90 
                 +lVtG+tGfiG++++  ll+kgy+v g  r  ++ n+  +  l          ++  d++++ a+++++k  ++d+v h+A    v++  +++a++++ 
  EPX71492.1   7 ALVTGVTGFIGAHVAVSLLNKGYRVRGTVRSMEKANELIR--LnpelkdkieFVIVKDIMEPYAFKDVVK--DCDYVCHIASPFFVSNVTDNKAQLLDP 101
                 59****************************9776665443..234789999777888*************..8************************** PP

                 HTHHHHHHHHHHHHH.TCTEEEEEEEGGGGT..............SCSS.SS..BSTCSTTS--.--SSHHHHHHHHHHHHHHHHHHHHT..-EEEEEE CS
   Epimerase  91 nlqgtlnlleaarka.gvkrllflsSsevYG..............kdae.qp..keettltgpl.kpnspYaaaKlageklveayaaqyg..lnaiilr 168
                  +qgtl  leaa +  +vkr++  sS +  G              k  +  p   ee +   ++ +   +Y a+K+ +ek ++++ ++ +  +++++++
  EPX71492.1 102 AVQGTLSALEAAITEpKVKRVVITSSFAAVGdftkdpssgyayseK--DwNPisYEEAL---KTdNGIVAYCASKVFAEKAAREWVKEKQphFDICTIN 195
                 ***********9988799*************555555555544321..12234466666...4458899****************9999555******* PP

                 ESEEESTT.S-TTSTTSHHHHHHHHHHT....TSSSEEEETTST-EEEEEEHHHHHHHHHHHHHHHTT- CS
   Epimerase 169 lfnlyGpr.ngegevsrvipalirkile....gkqevtllgdgtalRdflyveDvaeaillvlehvdag 232
                 +  +yGp  +++++++++     ++il     g  +v    + ++l   ++v+Dva+a++l+l+h++ g
  EPX71492.1 196 PPYVYGPTiHPMNSMDSL--NTSNQILWtvinGS-KVQP--SIQSL--QVDVRDVADAHVLALDHPKLG 257
                 ********7444443333..33455544111122.2222..22222..28***************8765 PP

>> 3Beta_HSD  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.8   0.0   6.2e-21   1.2e-17       1     229 [.       8     251 ..       8     271 .. 0.75

  Alignments for each domain:
  == domain 1  score: 63.8 bits;  conditional E-value: 6.2e-21
   3Beta_HSD   1 vvtGgaGFlGralvkeLvrlee..lkevrvlDlrespelleelskvnvkkviegDvtdkdkleealegvdvvihlaslvdvag.kltedeimkvnvkGT 96 
                 +vtG +GF+G+++  +L++ +     +vr++ ++++   l+   k +++ vi  D+++    ++++++ d v h+as   v + ++++ ++ +  v+GT
  EPX71492.1   8 LVTGVTGFIGAHVAVSLLNKGYrvRGTVRSMEKANELIRLNPELKDKIEFVIVKDIMEPYAFKDVVKDCDYVCHIASPFFVSNvTDNKAQLLDPAVQGT 106
                 69****************999765669999997777666666666667767888***********************99999956778899******** PP

   3Beta_HSD  97 rnvleacv.kagvrvlvYtSsaevvgpnslgeeilng...dEeleyeslhqd.........aypesKalaEklvlkaNgrtlkngg.rlyTcaLRpagi 181
                  + lea++ +  v+++v tSs  +vg+ +++++   g    E+   + ++++         ay  sK  aEk+   a +  +k+ + ++  c + p ++
  EPX71492.1 107 LSALEAAItEPKVKRVVITSSFAAVGD-FTKDPSS-GyaySEKDWNPISYEEalktdngivAYCASKVFAEKA---ARE-WVKEKQpHFDICTINPPYV 199
                 *****9972569**************9.6666654.3122333322222222111112222799999999975...555.6777777************ PP

   3Beta_HSD 182 yGegdkllvpllkqlaklglalfki.....gdeevlsdrvYvgNvawahilAa 229
                 yG+  + + +++  l  ++++l  +     +++++ s  v v  va+ah+lA 
  EPX71492.1 200 YGPTIHPM-NSMDSLNTSNQILWTVingskVQPSIQSLQVDVRDVADAHVLAL 251
                 ***97765.44555555555555541111155566667899**********97 PP

>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.9   0.0   1.1e-18   2.1e-15       1     141 [.       8     139 ..       8     205 .. 0.77

  Alignments for each domain:
  == domain 1  score: 56.9 bits;  conditional E-value: 1.1e-18
                    EEETTTSHHHHHHHHHHHHCT-CCEEEEEEESS-TTHHHHHCTTT...TTGCCEEEE.E--TT-HHHHHHHHHHHT-SEEEE--S---HHHHTTSH CS
  GDP_Man_Dehyd   1 LiTGiaGfiGsylaelLlekgyevhgivrrsssfntgriehlakdpkeeleenlklh.kgDltDssslerllaevqpdevynLAAqshVdvsfekP 95 
                    L+TG++GfiG+++a  Ll+kgy+v g+vr  ++ n  ++ +l  +p+  l+++++++   D+ +  + +++++++  d v + A   +V++  ++ 
     EPX71492.1   8 LVTGVTGFIGAHVAVSLLNKGYRVRGTVRSMEKAN--ELIRL--NPE--LKDKIEFViVKDIMEPYAFKDVVKDC--DYVCHIASPFFVSNVTDNK 95 
                    9**************************99877755..55455..344..55666655156*************98..9****************** PP

                    HHHHHHHTHHHHHHHHHHHHCT..TTSEEEEEEEGGGG-S-SSSSB CS
  GDP_Man_Dehyd  96 eytaevnvlGtlrLLeairalglekkvrfyqaStsEvYGkvqevpq 141
                    ++ ++  v Gtl  Lea+ +    k +r++++S+    G+ ++ p 
     EPX71492.1  96 AQLLDPAVQGTLSALEAAITEP--KVKRVVITSSFAAVGDFTKDPS 139
                    ******************8854..5689999999999898877665 PP

>> NAD_binding_4  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.7   0.1   2.7e-16   5.4e-13       1     232 [.       9     227 ..       9     250 .. 0.82

  Alignments for each domain:
  == domain 1  score: 48.7 bits;  conditional E-value: 2.7e-16
                    EE-TTSHHHHHHHHHHHHHS-.TEEEEEE-SSSHHHHHHHHHHHT-SS-HHHHHHHHHTTTEE.EEE--TTSGGGG--HHHHHHHHHH--EEEE-- CS
  NAD_binding_4   1 lTGaTGFLGkvLlekLLrttpevkiyllvRaksgesaeeRleeelekkelfsallkelaerik.vveGDlseprlGLseedlqelaeevdviihsa 95 
                    +TG+TGF+G+++   LL++    ++   vR+ ++++ + Rl+ e     l        +++i+ v++ D++ep+      +++++++ +d ++h+a
     EPX71492.1   9 VTGVTGFIGAHVAVSLLNKGY--RVRGTVRSMEKANELIRLNPE-----L--------KDKIEfVIVKDIMEPY------AFKDVVKDCDYVCHIA 83 
                    7****************9987..9********999999999433.....3........3444416778999998......9*************** PP

                    SS-...S.STTSSEEHHHHHHHHHHHHHHHTSSS--.-EEEEEE.GGGTTS-TTT--SSS-H......HHH--EEEETTTCCCHHHHHHHHHHHHH CS
  NAD_binding_4  96 Atv...nfdepykellrvNveGtrevlelakklkklkvllhvST.ayvngeregeveekvyeegekeekldederaklkglpntYeqsKalaEklv 187
                          n++++  +ll++ v+Gt   le a +  k k ++  S+ a+v +  ++  +  +y+e++ + + +e+++++++g+  +Y  sK+ aEk  
     EPX71492.1  84 SPFfvsNVTDNKAQLLDPAVQGTLSALEAAITEPKVKRVVITSSfAAVGDFTKDPSSGYAYSEKDWNPISYEEALKTDNGIV-AYCASKVFAEKAA 178
                    97522266677888******************99999*******99999999999999999999999999999999988875.8************ PP

                    HHHHHHH---...EEEEEE-EEE-...-SSST---TTSHHHHHHHHHHHH- CS
  NAD_binding_4 188 rearrrsglp...vvivRpsiitg...esktGwingsdlgirgllgliakg 232
                    re+ ++ + p   ++ + p++++g   ++++ ++++ ++  + l  +i+  
     EPX71492.1 179 REWVKE-KQPhfdICTINPPYVYGptiHPMN-SMDSLNTSNQILWTVINGS 227
                    ***987.4443449**********9987777.6777775555555555544 PP

>> NAD_binding_10  NAD(P)H-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.1   0.0     3e-12   5.9e-09       1     108 [.      11     137 ..      11     254 .. 0.70

  Alignments for each domain:
  == domain 1  score: 36.1 bits;  conditional E-value: 3e-12
                     TTTSHHHHHHHHHHHHC-T-EEEEEETTHHHCHHHH.....CTTTCE.EEE--TT-CCHHHHHHTT-SEEEES-......--TCCHHHH...... CS
  NAD_binding_10   1 GAtGkvGrllvkellargghevtalvRnpeklaele.....aeegle.vvegdvtdvedlaealkgadaVvsal......ggggkdeeg...... 77 
                     G tG +G +++  ll++ g++v+  vR+ ek++el       ++++e v++ d++++ + ++++k++d V+  +      +   +d+++      
      EPX71492.1  11 GVTGFIGAHVAVSLLNK-GYRVRGTVRSMEKANELIrlnpeLKDKIEfVIVKDIMEPYAFKDVVKDCDYVCHIAspffvsN--VTDNKAqlldpa 102
                     78***************.5*************98764333222455546778******************98886777542..223333456666 PP

                     ....HHHHHHHHHHCT--EEEEEEETTTTSGCGCH CS
  NAD_binding_10  78 ....aknivdaakeagvkRfvlvsaigvgdevpge 108
                           ++ +a  e +vkR+v+ s++ +  +  ++
      EPX71492.1 103 vqgtLSALEAAITEPKVKRVVITSSFAAVGDFTKD 137
                     6674444445567789********98764333322 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0   6.3e-07    0.0013       2      71 ..       6      76 ..       5      80 .. 0.88
   2 !   10.2   0.0   0.00019      0.37     141     187 ..     159     204 ..     152     212 .. 0.84

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 6.3e-07
                EEEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHTTSEEEE.EE-TTTSHHHHHHHHHHH CS
   adh_short  2 vvlvtGassGIGraiakelakeGakvvvvdrseekleevakelkeegakala.iqvDvtdreevealveka 71
                 +lvtG ++ IG  +a  l+++G++v  + rs ek++e++    e+++k+ + i  D+ +  + +++v+++
  EPX71492.1  6 LALVTGVTGFIGAHVAVSLLNKGYRVRGTVRSMEKANELIRLNPELKDKIEFvIVKDIMEPYAFKDVVKDC 76
                69**************************************9999998887651677999999999888865 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00019
                 SB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHHH CS
   adh_short 141 vpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdma 187
                 +  +g +aY+AsK + ++ +r++ ke +p+   + +++P++v  ++ 
  EPX71492.1 159 KTDNGIVAYCASKVFAEKAAREWVKEKQPH-FDICTINPPYVYGPTI 204
                 5667899**********************9.99******99986655 PP

>> Polysacc_synt_2  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.5   0.1     4e-10     8e-07       2     132 ..       8     131 ..       7     135 .. 0.87

  Alignments for each domain:
  == domain 1  score: 28.5 bits;  conditional E-value: 4e-10
                      EEETTTSHHHHHHHHHHHHHB-SEEEEEES-HHHHHHHHHH......-TTEEEE....E--TT-HHHHHHHTT..T-SEEEE------HHHHHH CS
  Polysacc_synt_2   2 lvtGagGsiGselvrqilkkkpkkiillerdElklyeiekeleeelkkkklkveivpvigdvrdkerlekaleelkvdvvfhaAAlKhVPlvee 95 
                      lvtG +G iG ++   +l+k  +    + + E++   i+ +   elk+ k+++    ++ d+ +    +++++  ++d+v h A    V  v  
       EPX71492.1   8 LVTGVTGFIGAHVAVSLLNKGYRVRGTVRSMEKANELIRLNP--ELKD-KIEFV---IVKDIMEPYAFKDVVK--DCDYVCHIASPFFVSNVTD 93 
                      8*******************8887778888888777777653..4444.77666...99**************..******************* PP

                      SHHHHHHHHHHHHHHHHHHHHHT.T-SEEEEEEEGGGS CS
  Polysacc_synt_2  96 npleaiktNvlgtenvieaaiea.gvkkvvliStDKAv 132
                      n ++ ++  v gt + +eaai+  +vk+vv+ S+  Av
       EPX71492.1  94 NKAQLLDPAVQGTLSALEAAITEpKVKRVVITSSFAAV 131
                      ********************86439*******987666 PP

>> NmrA  NmrA-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.2   2.9e-07   0.00057       2     122 ..       8     147 ..       7     198 .. 0.66
   2 ?    0.0   0.0      0.26   5.2e+02     159     205 ..     215     261 ..     156     284 .. 0.60

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 2.9e-07
                 EESSTTSHHHHHHHHHHHHHT-EEEEEES-S.....-SHHHHHHHHSTTEEEES-TT-HHHHHHHHTT-SEEEE---GG.............S-HHHHH CS
        NmrA   2 lviGaTGrqGksvvrallkaghkvralvRdt.....kselakslkeaGvelvkgdlddkeslvealkgvdvvfsvtgfy.............skeiedg 82 
                 lv+G TG +G++v+  ll++g++vr  vR          l  +lk++   ++  d+ +    + ++k+ d v    + +             +  + +g
  EPX71492.1   8 LVTGVTGFIGAHVAVSLLNKGYRVRGTVRSMekaneLIRLNPELKDKIEFVIVKDIMEPYAFKDVVKDCDYVCHIASPFfvsnvtdnkaqllDPAV-QG 105
                 79****************************96533323345689999888889999999999*****99988544332236666677554432223.33 PP

                 H..HHHHHHHHHS-SEEEE.EE---GG.GT.SSS---TTTHHH CS
        NmrA  83 k..klvdAakeaGvkhfiy.SslgddndrsnaeepavphfdsK 122
                 +  +l +A+ e +vk+++  Ss+++  d + ++  + +++++K
  EPX71492.1 106 TlsALEAAITEPKVKRVVItSSFAAVGDFT-KDPSSGYAYSEK 147
                 212455677777799876515555555555.444466777777 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.26
                 EE-TTS.-EEEEESS-TTS-EE.-HHHHHHHHHHHHHHHHHHHTTEEE CS
        NmrA 159 dtappedkvtllgpgnpkavll.daeeDiGafvikilkdprklkgkri 205
                  +++  ++v+     +p++  l ++++D++ + + +l++p+ l g r+
  EPX71492.1 215 TSNQILWTVINGSKVQPSIQSLqVDVRDVADAHVLALDHPK-LGGGRV 261
                 33334445555555666677778899999999999998885.444444 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   3.8e-05     0.075       4     140 ..       8     131 ..       6     143 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 3.8e-05
                 EEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHTT-EEEE.----TT-HHHHHHHHHHHHHHSS---EEEE---------TTT-- CS
          KR   4 litGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaelealgaevev.vaaDvsdkdavealleeikaeeppikGvihaAgvlrdklleemt 101
                 l+tG +G +G ++a  l++kg r +  + Rs +   ++++li+   +l  ++e+ +  D+ ++ a + ++++++        v h A  +    + +  
  EPX71492.1   8 LVTGVTGFIGAHVAVSLLNKGYR-VRGTVRSME---KANELIRLNPELKDKIEFvIVKDIMEPYAFKDVVKDCD-------YVCHIASPF----FVSNV 91 
                 9********************76.556667743...3444555555555566541345**************98.......588888654....44444 PP

                 HHHHHHHHTTTTHHHH.HHHHHTTTS--SEEEEEEEHHHH CS
          KR 102 aedleqvlapKvkGaw.nLhelledesldffvlfSSiagl 140
                 +++ +q+l p v+G+   L+ ++++ +++ +v++SS a++
  EPX71492.1  92 TDNKAQLLDPAVQGTLsALEAAITEPKVKRVVITSSFAAV 131
                 55667999*****9863799999999**********9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (340 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       412  (0.0229795); expected 358.6 (0.02)
Passed bias filter:                      349  (0.0194657); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.68u 0.40s 00:00:01.08 Elapsed: 00:00:00.60
# Mc/sec: 1718.26
//
Query:       EPX71493.1  [L=348]
Description: dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    9.2e-12   45.1   0.0    1.4e-11   44.5   0.0    1.4  1  ADH_zinc_N    Zinc-binding dehydrogenase
  ------ inclusion threshold ------
      0.035   15.2   0.0       0.06   14.4   0.0    1.4  1  ADH_zinc_N_2  Zinc-binding dehydrogenase
      0.043   13.7   0.1       0.19   11.6   0.1    2.0  2  ADH_N         Alcohol dehydrogenase GroES-like domain


Domain annotation for each model (and alignments):
>> ADH_zinc_N  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.5   0.0   2.4e-15   1.4e-11       2      76 ..     165     237 ..     164     299 .. 0.87

  Alignments for each domain:
  == domain 1  score: 44.5 bits;  conditional E-value: 2.4e-15
                 HHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTESEEEETTTCHHHHHHHHHTTTSSEEEEEESSCSHHHHHHHH CS
  ADH_zinc_N   2 vGlaavqlAkalGaeviavdsseeklelakklGadevinykeadlverikeltggegvdvvfecvGsgatleaal 76 
                 vG++avq+Ak  G+ v+a++s + +++l++klGa++v++y++ ++ve+ik++t+ + v + f+++   +t++ ++
  EPX71493.1 165 VGQYAVQFAKLGGCDVVATCSPK-NFKLVEKLGATFVFDYHDSQVVEKIKQATN-DSVFFGFDAISLSHTITKCI 237
                 9******************9877.6***************6659*********5.69999999999888877665 PP

>> ADH_zinc_N_2  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0     1e-05      0.06       1      98 [.     195     301 ..     195     340 .. 0.64

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 1e-05
                   TT-SEEEETTSTTHH....HHH-TT-EEEEEES-HHHHH.HHHHHHE...EEEEEEEE----.......S-EEE-CHHHCTTT-EEEE--GGG...- CS
  ADH_zinc_N_2   1 lGAdevidyrtedfe....aatggegvDvvldtvggealleaslkvl...pggGrlvsiggpp......lsaallkpakkrkgrsvkyeflfsmkas 84 
                   lGA+ v+dy++ +++    +at +++v   +d++   +++++++ +    ++ ++l++++gpp      + + + + ++   ++++ +   + ++ s
    EPX71493.1 195 LGATFVFDYHDSQVVekikQAT-NDSVFFGFDAISLSHTITKCIMAFsleAKAAKLITVLGPPenpreeAVDVITAFSFSLFNAKFEFFGEI-VQGS 289
                   8*********777776885555.67799999999988888999966568888899*****99899988755666666664444444444444.4444 PP

                   ......-HHHHHHHHHHHH CS
  ADH_zinc_N_2  85 .....aqadileelaalie 98 
                        +       +a+l+e
    EPX71493.1 290 sedyeH-------IAKLFE 301
                   343433.......444433 PP

>> ADH_N  Alcohol dehydrogenase GroES-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   3.2e-05      0.19       2      59 ..      26      81 ..      25      88 .. 0.87
   2 ?   -2.7   0.0      0.93   5.5e+03      38      64 ..     319     345 ..     318     347 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 3.2e-05
                TEEEEEEEEEEE-HHHHHHHTTSTTTTSSSSEE---EEEEEEEEESTT-CS.--TT-EE CS
       ADH_N  2 gevlikvkaagiCgsDlhilkggkelevklplilGHEivGeveevgpevkk.lkvGdrV 59
                g++l +v+  g++  D +i+ +   ++ + + i G ++v +veevg++v+    +G +V
  EPX71493.1 26 GQILGRVSHIGLNPIDWKIAYN---VPISKGTIGGTDFVAIVEEVGEGVDAdKYIGAKV 81
                5777799999999***999997...89**********************9845567776 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.93
                 EEEEEEEEESTT-CS--TT-EEEE-SE CS
       ADH_N  38 EivGeveevgpevkklkvGdrVvvepl 64 
                 E++G  +++ +++++++ G++ +++++
  EPX71493.1 319 EFAGGLQAIPDALNEFSSGNHSAIKFV 345
                 899999999999999999999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (348 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       291  (0.0162307); expected 358.6 (0.02)
Passed bias filter:                      278  (0.0155056); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.48
# Mc/sec: 2201.05
//
Query:       EPX71494.1  [L=511]
Description: ammonium transporter Amt3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.3e-92  309.8  21.8    7.5e-52  176.4   8.4    2.0  2  Ammonium_transp  Ammonium Transporter Family
  ------ inclusion threshold ------
       0.64   10.1   1.9        4.1    7.5   0.4    2.7  2  PspB             Phage shock protein B


Domain annotation for each model (and alignments):
>> Ammonium_transp  Ammonium Transporter Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.5   5.4   1.3e-44   1.1e-40       3     178 ..      43     221 ..      40     239 .. 0.89
   2 !  176.4   8.4   8.4e-56   7.5e-52     180     392 ..     259     475 ..     241     481 .. 0.95

  Alignments for each domain:
  == domain 1  score: 139.5 bits;  conditional E-value: 1.3e-44
                      HHHHHHHHHHHHHHHHHHHHHHSSGGGHHHHHHHHHHHHHHHHHHHHHTHHHHHHSSCBSSSSSCE-.......TTTTSCCGCCTTCCHHHHHH CS
  Ammonium_transp   3 lllsaalvifmqagfalleaglvrsknvlnilvknlldlavvvllyvlfGyslafgkskgvsgfign.......lglsaagvqdetlldglffl 89 
                      +lls ++v+++++g+al++ag++r+ ++l+il++++l +av++++++l+Gysla      +s+f g+         ++   v+ +t++++++f 
       EPX71494.1  43 VLLSCVVVFLVTPGIALYYAGMIRKRSALSILTQSFLVTAVIMVQWYLIGYSLAVAP---GSSFYGSlslgglhNVWFDPYVPGSTIPAIVYFP 133
                      34455555555*******************************************886...6888888777888656667788999********* PP

                      HHHHHHHHHHHHHHHHCTTTB-HHHHHHHHHHHHHHTHHHHHHHHHS.SSHHHHTT--.-SSSTTTTHHHHHHHHHHHHHHHS-STTTT CS
  Ammonium_transp  90 fqlafaataitivsgavaerikfsayllfsallgtlvyppvahwvwgeggwlaklgvliDfAgstvVHlvggvagLaaalvlgkregrf 178
                      f   fa+t++ +  ga+aer ++++ l++++l +t+vy+p a+w+w+ +gwl ++g+l DfAg++ VH+ +g+a+La+ +vlg+r++  
       EPX71494.1 134 FGGLFAVTTAQLLIGAMAERGRLVPSLVIAFLYITFVYCPQAYWTWSSKGWLFTMGAL-DFAGGGPVHISSGFAALAYSFVLGRRREPS 221
                      **********************************************************.*************************99754 PP

  == domain 2  score: 176.4 bits;  conditional E-value: 8.4e-56
                      TTTSS--GSBHHHHHHHHHHHHHHHHHHHHGGGSSSSHHHHH.HHHHHHHHHHHHHHHHHHHHHHHCSS-BHHHHHHHHHHHHHHHTTTTTTS- CS
  Ammonium_transp 180 gkeeaikghnlpfavlGtllLwfgWfgFNaGsaltankrararaavtTllAaaagaltallisrlkegkinvlglanGilAGlVAiTaacavve 273
                      g+  ++++hn  +a lG++l+w  W++FN+G+ l++n r ++ ++ +Tl++++++ +t++++++++  ki++lg+ +G++AGlV+iT++c+ v 
       EPX71494.1 259 GHIPKYPPHNPAMAYLGAVLIWCSWLTFNSGTLLAINLRTAY-IFANTLISSSFACVTWVAMDYVRYRKISILGVSEGAIAGLVGITPGCGHVY 351
                      4667899***********************************.*************************************************** PP

                      HHHHHHHHHHHHHHHHHHHHHHHHHHTC-CTTHHHHHHHHHHHHHHHHHHHHTSHHHC....SSHSSTTGGGT-CHHHHHHHHHHHHHHHHHHH CS
  Ammonium_transp 274 pwgAliiGlvAgvlsvlgvkklkeklkidDsldvvavHgvgGiwGllavgifaaekvv....askisggllsgegkqlvvqligilvilayafv 363
                      pwgA + G+ ++v+++l ++ + ++l id++l v+++Hg+gG++G+++ g++a+++v+    a+ i+gg++  ++ q+++q +  + ++a++fv
       EPX71494.1 352 PWGAAVAGMFTAVVCNLLHD-IGNWLSIDEPLRVFNLHGIGGVMGSIVLGVVAHPNVAasdgATVIQGGWIVRHWVQMGYQFASFTSVAAWSFV 444
                      *******************8.***********************************9999999999**************************** PP

                      HHHHHHHHHHHHTT..SB--HHHHHHSHHHH CS
  Ammonium_transp 364 vtlilllllklllg..LrvseeeeevglDva 392
                      vt i++ll+++++g  +r ++ eee+g+D +
       EPX71494.1 445 VTAIICLLVDMVPGlqIRCTPGEEEQGMDYI 475
                      **************66788999*******76 PP

>> PspB  Phage shock protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.4   0.00046       4.1       4      36 ..      40      72 ..      38      89 .. 0.87
   2 ?    0.3   0.0      0.08   7.2e+02       5      31 ..     301     327 ..     298     334 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.00046
        PspB  4 flavpliifvlfVapiWLiLHYrskkkrskgls 36
                +  v+l ++v+f++ +++ L+Y  + ++++ ls
  EPX71494.1 40 MTYVLLSCVVVFLVTPGIALYYAGMIRKRSALS 72
                678999*****************9999998887 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.08
        PspB   5 lavpliifvlfVapiWLiLHYrskkkr 31 
                 +++ + i   f  ++W+ + Y+  +k 
  EPX71494.1 301 IFANTLISSSFACVTWVAMDYVRYRKI 327
                 677788899999*********987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (511 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       757  (0.0422221); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.46
# Mc/sec: 3364.13
//
Query:       EPX71495.1  [L=709]
Description: copper amine oxidase Cao1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   4.1e-157  523.3   0.0   5.3e-157  522.9   0.0    1.1  1  Cu_amine_oxid    Copper amine oxidase, enzyme domain
    1.1e-26   93.1   0.1    3.5e-26   91.5   0.1    1.9  2  Cu_amine_oxidN3  Copper amine oxidase, N3 domain
    5.1e-09   36.2   0.0    9.4e-09   35.4   0.0    1.5  1  Cu_amine_oxidN2  Copper amine oxidase, N2 domain


Domain annotation for each model (and alignments):
>> Cu_amine_oxid  Copper amine oxidase, enzyme domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  522.9   0.0  8.9e-161  5.3e-157       2     410 .]     236     653 ..     235     653 .. 0.97

  Alignments for each domain:
  == domain 1  score: 522.9 bits;  conditional E-value: 8.9e-161
                    ----TT---SEEETTTEEEETTEEEEEEEETTTEEEEEEEEETT....EEEEEEEEEEEEEEEE--SSHHHHH-EEEGGGT.-SGGG-----TTTS CS
  Cu_amine_oxid   2 evvqpeGpsfkvdegnlvewqkWsfrvgfnrreGlvlhdvrykg....rrilyrlslsemvvpYgdprppasrkaafDlgeyglGklansLelgcD 93 
                     + qp+G++f++ +g+++ewq+++f++gfn+reG+vl+d++y++    r+++yr+sl+emvvpYg+p++p++rk+afDlgeyg+G l+n+L+lgcD
     EPX71495.1 236 AIAQPQGVNFTL-KGRYIEWQNFRFHIGFNYREGIVLSDITYNDhgnvRPLFYRMSLAEMVVPYGNPEHPHQRKHAFDLGEYGAGFLTNPLALGCD 330
                    689*********.8********************************************************************************** PP

                    S-TT-EEEEEEEEE..TEEEEEEEEEEEEEEE-S-SEEEE-S......EEEE--EEEEEEEEEEETTEEEEEEEEE-TTS-EEEEEEEEE----EE CS
  Cu_amine_oxid  94 ClgeityldavladssgepvtiknaiCifEedagilwkHtdfrtg.r.aevtrnreLvvrtiatvgNYdYifdyiFkqdGsievevratGilstaa 187
                    C+g i+ylda+++ ++ge++++knaiCi+Eed+g+l+kH+dfr++ + + +tr  +Lvv++i+t +NY+Y+++++F++dG ie+++++tGil+t+a
     EPX71495.1 331 CKGVIHYLDAHFVRHTGEVQHVKNAICIHEEDDGVLFKHSDFRDQfQtTISTRGIKLVVSQIFTAANYEYMVYWTFHMDGVIECQLKLTGILNTYA 426
                    ********************************************985699********************************************** PP

                    -T......GG--EEETTEE---EEEEEEEEEEE-T.SSEEEEEEEEE-T...TT.T-...-EEEEEEEEEE--BGGG-EE--.-GG-EEEEEEEEE CS
  Cu_amine_oxid 188 laeeee.skygtrvapgvlasiHqHlfslrvDldidgeknsvveeelvp.eepelgeenpagnafkvektvletekeaaldldpeknrvlkivnen 281
                    ++++e+ + +gt+v p+v+a++HqHlf+lr+++++dg +nsv+ +++v+      ++en +gnaf+ ++tv++t ke+  d+d +++r+++i+n+n
     EPX71495.1 427 MNADEDtNGWGTQVYPQVNAHNHQHLFCLRLNPMVDGVDNSVAINDAVSgDGLPGSKENYYGNAFTNKRTVAKTVKESISDYDGATSRTWEICNPN 522
                    **999548*****************************99********99743446779************************************** PP

                    EE-.TTS-EEEEEEE-S----..---SS-TTTTTTTGGGG-SEEEEE--TT---S--TTGG-TTS.-.--GGGG-.S--..B-SSEEEEEEEEEEE CS
  Cu_amine_oxid 282 kkn.klgepvgYklvpssaasqlllakesslvakraefakhhlwvtkykdselyaageynnqskgep.vglakwvedne..sieneDlVvWvtlGl 373
                    k + ++++pv++klv+++   ++lla+++slv +ra fa+hh++vt+ykd++ y+ag+y+ q++gep +gl++w+e+n   ++en+D+VvW+t+G+
     EPX71495.1 523 KLHpYSKKPVSFKLVSRE--VPPLLARPGSLVSNRAGFARHHMHVTPYKDGQYYPAGDYVPQTSGEPsKGLPEWIEENPegNVENTDIVVWHTFGI 616
                    ****************66..778*************************************99999889*******99876799************* PP

                    EE---GGGSS-TTTSEEEEEEEEES-SSS-GGGG-S- CS
  Cu_amine_oxid 374 tHvpraeDfPvmpvetvsflLkPvnFfdenpaldvpp 410
                    tH+p +eDfPvmp+e +s+lL+P+nFf +npaldvpp
     EPX71495.1 617 THFPAPEDFPVMPAEPISLLLRPRNFFLRNPALDVPP 653
                    ***********************************96 PP

>> Cu_amine_oxidN3  Copper amine oxidase, N3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.5   0.1   5.9e-30   3.5e-26       1     100 [.     108     209 ..     108     210 .. 0.97
   2 ?   -3.6   0.0       2.6   1.6e+04      20      37 ..     375     392 ..     373     400 .. 0.68

  Alignments for each domain:
  == domain 1  score: 91.5 bits;  conditional E-value: 5.9e-30
                      S---HHHHHHHHHHHHTGGGGHHHHHHHH.TTT..T---EEEE--SS-SSST.T--EEEEEEEE--SSS.-GCGSEEE.EEEEEE--SSSGGG- CS
  Cu_amine_oxidN3   1 ppvlleelaeieevikelpqfkealkkrg.ien.ldkvvltpltvgyrgeksegkRllkalvyyrtesa.nlyahPiegLellvDleakkviei 91 
                      p+++++ + ++e +++++p+++e++  +g +++ +d v+++p+t+gy+++ ++ +Rl++al+yyr++++ ++y+hP++ +++++D+eakkvi+i
       EPX71495.1 108 PIITADTMEQTEWIVRNDPKVREQCILSGvPADeIDHVYCDPWTIGYDERFGNARRLQQALMYYRSNEDdSQYSHPLD-FCPVIDTEAKKVIAI 200
                      89****************************9999*******************************99998********.*************** PP

                      EEEEEEETT CS
  Cu_amine_oxidN3  92 tdqkvlvpv 100
                      +++ v++p+
       EPX71495.1 201 DIPSVRRPL 209
                      ****99986 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 2.6
                      GGHHHHHHHHTTT.T--- CS
  Cu_amine_oxidN3  20 qfkealkkrgienldkvv 37 
                      qf+ ++ +rgi+ +  ++
       EPX71495.1 375 QFQTTISTRGIKLVVSQI 392
                      899999999977644433 PP

>> Cu_amine_oxidN2  Copper amine oxidase, N2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.4   0.0   1.6e-12   9.4e-09       2      86 ..      16     102 ..      15     103 .. 0.87

  Alignments for each domain:
  == domain 1  score: 35.4 bits;  conditional E-value: 1.6e-12
                      HHHHHHHHHHHHCCCCCCCCTCT-TTSEEEEEEEEE---HHHHHHHHHCH---..S-EEEEEEEEETSSS..SEEEEEEEEEECCSEEE CS
  Cu_amine_oxidN2   2 pLdaltaaeinkvesilkssaletskknsffeveLeePdKkavlqflekgepp..ppRkAsvvilfGkqt..kelvvdLatgkllspry 86 
                      p+d+l + e++ ++  +++s+   +++ sf+ ++L+eP+K+ +l +++  +    p R A vv+l+++ +   e+ v+L+   +l ++ 
       EPX71495.1  16 PMDPLGPEELKLAVNLVRKSF--PEHNYSFNVITLNEPPKYEYLGWKQYPNVQprPDRIALVVVLEAGVPglVEGRVNLTKHTILDWKH 102
                      99******************9..888********************55433224599***********998889999999999888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (709 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       328  (0.0182944); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.41
# Mc/sec: 5134.98
//
Query:       EPX71496.1  [L=456]
Description: 5-aminolevulinate synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.9e-66  224.7   0.1    2.3e-66  224.4   0.1    1.0  1  Aminotran_1_2    Aminotransferase class I and II
    7.8e-09   34.5   0.1    1.2e-08   33.9   0.1    1.2  1  Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
    3.7e-05   22.9   0.1    5.2e-05   22.4   0.1    1.2  1  Aminotran_5      Aminotransferase class-V
    5.8e-05   22.5   0.0    8.6e-05   22.0   0.0    1.3  1  Beta_elim_lyase  Beta-eliminating lyase


Domain annotation for each model (and alignments):
>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  224.4   0.1   5.1e-70   2.3e-66       6     356 ..      83     416 ..      78     424 .. 0.95

  Alignments for each domain:
  == domain 1  score: 224.4 bits;  conditional E-value: 5.1e-70
                    SSSSSTTSTTSSHHHHHHHHHHHH..HHHHHTSTTST-BTTHHHHHHHHHHHHHCTCTTCHTTGGEGEEEESHHHHHHHHHHHHHHHTTT-EEEEE CS
  Aminotran_1_2   6 Lgsneylgdsgkptlpevakaeke..galaggtlneygpidglpeleealakflgrseklklkreaavvvgsGagaliealifllklnpgdeilvp 99 
                    ++sn+ylg+  + ++ ++++   +  g++++g++n+ g++++  +le+ lak+++        +ea +v+ sG+ a++ +l++l+++ pg+ ++++
     EPX71496.1  83 WCSNDYLGMRMNKEISNAIHSFVDryGVSSTGSRNIAGHNQVFVDLENSLAKLHQ--------KEACLVFNSGYVANDTTLATLAQKLPGCIFFSD 170
                    9********999*******************************************........999****************************** PP

                    ESS-THHHHHHHHTTSEEEEEEBEETTTTEE-HHHHHHHHTTHHCTTETEEEEEEESS-TTT--B--HHHHHHHHHHHHHTTEEEEEEETTTTCBS CS
  Aminotran_1_2 100 dptyasyknilrlsggevvryplyseedfhldlealeealkeapegnkktkvilvesphNPtGtvatleeleklldlakkynlllfvDeaYagfvf 195
                    ++++as+++++r+ +++ v ++       h+dl++le++l++ p+ ++  k+i++es++++ G++a+ e ++kl   ak+y++l+++De++a++++
     EPX71496.1 171 ALNHASMIQGIRNGKAAKVIFK-------HNDLQDLEAKLAKYPKTSP--KIIAFESIYSMNGDIAPIESICKL---AKQYGALTYLDEVHAVGMY 254
                    **********************.......*******************..************************...******************* PP

                    SSSHTHHH.HGGSTTSTTEEEEEESSSTTSSGGG-EEEEEEEHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Aminotran_1_2 196 gsldavat.ranveeepnllivgslsKafGlaGeRvGyilgnaavvsqlrklsrpflsssllqaavaaalsdallkqseleemrqrlqkrrkelrd 290
                    g+++a  +  +nv++ ++ +i+gsl+K+++++G   Gy++g+ a+v+ +r++  +f+++s+l++   aa+ ++ ++ +  +++r+  ++  ++l+d
     EPX71496.1 255 GEQGAGVAaALNVSDQVD-IITGSLAKSYSATG---GYAVGSFAFVDFIRSFCPGFIYTSSLPPHDIAAALTSVEYLKTSNKERALQKSAVRKLKD 346
                    *99665555*******99.**************...**********************88888887777777777889****************** PP

                    HHHHSTEEEECCSCSSEEEEEETHHCHHHHHHHHHHTCTEEEEEGGGGTS...TTEEEEEC.TTS-HHHH CS
  Aminotran_1_2 291 eLaelglkvlasqsgmflltdlsaetakelskkLleevgvyvtpgtsftv...pgrlRitv.Aglteeel 356
                    +L++ g+++l++qs++++++++ +e    +s+ L++ +++y+ +++++tv   ++rlR+t+ + +++e +
     EPX71496.1 347 ALTDSGIPFLSNQSHIVPIMVGHPEYGRLISRDLITDYNIYLHHINYPTVakgTERLRVTPtPLHNDEAI 416
                    *************************99999999****************************999998865 PP

>> Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   0.1   2.7e-12   1.2e-08      56     180 ..     127     253 ..     119     280 .. 0.85

  Alignments for each domain:
  == domain 1  score: 33.9 bits;  conditional E-value: 2.7e-12
                      HHHHHHHHHHT-SEEEEESSHHHHHHHHHHTTS-T.TEEEEEESTSSHHHHHHHHHTHHHTTCEEEEESTTSHH.HHHHHCCTTEEEEEEESS- CS
  Cys_Met_Meta_PP  56 vleeriaaLeggeaalavssGmaAiaaailallka.GdeivvsddlYggtqrllkkvlkklgievkfvdtsdle.elekaikentklvylEtpt 147
                       le+++a+L++ ea+l+++sG  A ++++ +l+++    i  sd l   +  +  +  k  ++ +k+ d +dle +l+k  k   k++ +E++ 
       EPX71496.1 127 DLENSLAKLHQKEACLVFNSGYVANDTTLATLAQKlPGCIFFSDALNHASMIQGIRNGKAAKVIFKHNDLQDLEaKLAKYPKTSPKIIAFESIY 220
                      69*******************************9955556666666666666666666778899999999887526888888999********* PP

                      TTTT----HHHHHHHHHHTT-EEEEEGTTTHTT CS
  Cys_Met_Meta_PP 148 npllkvvDiekiaklakkagvlvvvDntfaspl 180
                      +   +++ ie+i+klak+ g+l+ +D + a ++
       EPX71496.1 221 SMNGDIAPIESICKLAKQYGALTYLDEVHAVGM 253
                      **************************9988776 PP

>> Aminotran_5  Aminotransferase class-V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.1   1.2e-08   5.2e-05      89     181 ..     164     252 ..      95     286 .. 0.73

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 1.2e-08
                  SEEEEETTSHGGGTHHHHHHHHHHTEEEEEEEBETTSCBEGGGHHHH--TTEEEEEEESBETTTTEB--HHHHHHHHHHTT-EEEEE-TTTTT CS
  Aminotran_5  89 deivvteaehhanlvpwqelakrtgakvkvipldeegeldldelekllnektklvaithvsnvtGtiqpveeigklakkkgalvlvDaaqavg 181
                   +i  ++a  ha +  +q +++ + akv +++ ++ + l+  +l+k+ +  +k++a+  + ++ G i p+e+i+klak++gal+ +D + avg
   EPX71496.1 164 GCIFFSDALNHASM--IQGIRNGKAAKV-IFKHNDLQDLE-AKLAKYPKTSPKIIAFESIYSMNGDIAPIESICKLAKQYGALTYLDEVHAVG 252
                  44555544445554..577777666776.66666666666.66677779999************************************99987 PP

>> Beta_elim_lyase  Beta-eliminating lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0   1.9e-08   8.6e-05      29     213 ..     120     294 ..     110     373 .. 0.79

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 1.9e-08
                      T--HHHHHHHHHHHHHTT-SEEEEES-HHHHHHHHHHHH--TTEEEEEETT-HHHHSSTTHHHHCC--EEEEE-EBTTTBE-HHHHHHHS--S- CS
  Beta_elim_lyase  29 gedktvnrLedavaelfgkeaalfvpqGtaAnsillkillqrgeevivtepahihfdetgaiaelagvklrdlknkeaGkmdlekleaaikevg 122
                      g ++ + +Le+ +a+l  kea l + +G  An   l++l+q+ ++ i+ ++a  h    ++i      k+ ++  k+    dl++lea++++  
       EPX71496.1 120 GHNQVFVDLENSLAKLHQKEACLVFNSGYVANDTTLATLAQKLPGCIFFSDALNHASMIQGI---RNGKAAKVIFKH---NDLQDLEAKLAKYP 207
                      88999************************************999998888888777766666...334455566555...599********955 PP

                      TTS-EEEEEEEESSBTTTTTB---HHHHHHHHHHHHHCT-EEEEEETTHHHHHHHHTS-CHHHH...TTSSEEEEESSSTT--SS-EEEEE-HH CS
  Beta_elim_lyase 123 aheekiklisltvTnntagGqvvsleelrevaaiakkygiplhlDgARfanaakslgeivkemf...syvDsvtmslkKdllanvGgvlafrdd 213
                      +    +k+i  +  + ++ G + ++e+   + ++ak+yg    lD    +    + g+ v+  +   + vD++t sl K  +a  Gg  +++ +
       EPX71496.1 208 K--TSPKIIAFES-IYSMNGDIAPIES---ICKLAKQYGALTYLDEVHAVGMYGEQGAGVAAALnvsDQVDIITGSLAKSYSA-TGGYAVGSFA 294
                      5..5566666665.5556899888665...688999***99999987766666554444444443336788888888888887.7777766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (456 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       489  (0.0272742); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.29s 00:00:00.85 Elapsed: 00:00:00.46
# Mc/sec: 2951.40
//
Query:       EPX71497.1  [L=521]
Description: acetyl-CoA hydrolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.5e-45  154.2   0.0    3.9e-45  153.6   0.0    1.3  1  AcetylCoA_hyd_C  Acetyl-CoA hydrolase/transferase C-terminal 
    9.8e-28   97.5   0.0    1.7e-27   96.7   0.0    1.4  1  AcetylCoA_hydro  Acetyl-CoA hydrolase/transferase N-terminal 
    0.00012   21.1   0.5    0.00024   20.1   0.2    1.5  2  CitF             Citrate lyase, alpha subunit (CitF)


Domain annotation for each model (and alignments):
>> AcetylCoA_hyd_C  Acetyl-CoA hydrolase/transferase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.6   0.0   6.4e-49   3.9e-45       3     153 ..     332     480 ..     331     481 .. 0.96

  Alignments for each domain:
  == domain 1  score: 153.6 bits;  conditional E-value: 6.4e-49
                      HHHHHHHTT.-TTEEE-BHHHHT-HHHHTTSTTEEEEEE-SEEETTS-EESSEC.TTCCTCGGTTHHHHHHHHHHSTT-EEEEE--SEETTTT. CS
  AcetylCoA_hyd_C   3 kklydflde.npkielrpveyvndpeviaqnkkvvsinsalevdltGqvnsesl.ggrvvsGvGgqldFvrgaalskggksiialpStakkge. 93 
                      +++y+++d  ++++ lrp++++n+pe+i++   ++s+n+ +evdl+G+vns+++ g+r+++G+Gg+ dF+r+a+l     si+++pS++++++ 
       EPX71497.1 332 ENFYKNWDFyKEHVILRPQAITNSPEIIRR-LGCISLNTPVEVDLYGHVNSTCVmGTRMLNGIGGSGDFMRNAKL-----SIMHTPSVRPTKTd 419
                      589*****989******************9.********************************************.....*********99866 PP

                      ...EESEESS-STTSSECE-TTT-SEEEETTEEEE-TT--HHHHHHHHHT.TS-HHHHHHHHHH CS
  AcetylCoA_hyd_C  94 ...iSrIvpslkegahvtttrhdvdyvvTEyGiadLrgkslreraealik.iAhpdfreeLlee 153
                         iS+Ivp ++   hv++t+hd+d+vvTE+G+adLrg+s+rera ++i+ +Ahp +r+ L+++
       EPX71497.1 420 pigISTIVPKVT---HVDHTEHDIDIVVTEQGLADLRGLSPRERAIEIIEnCAHPVYRPILMDY 480
                      7769********...**********************************************987 PP

>> AcetylCoA_hydro  Acetyl-CoA hydrolase/transferase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.7   0.0   2.8e-31   1.7e-27       6     198 .]      15     229 ..      10     229 .. 0.94

  Alignments for each domain:
  == domain 1  score: 96.7 bits;  conditional E-value: 2.8e-31
  AcetylCoA_hydro   6 ekklkepeeaaelvkngshielsgftavgtakaipkylakrkvekenvkkkllidlavgavlsagPeeevleekdavlyrpapkqvgellrkai 99 
                      + k+ +p  + + ++  + i++sgft+v  ++   + l+ ++v  +++  k ++dl v  +      e  l+e d+v  r  p+qv++ + k +
       EPX71497.1  15 QDKITKPSSLLSSFQGHQTIGWSGFTGVDYPLQTLEPLI-NEVRSNKAFAKPKFDLRVCSSGGTV-TESALSELDMVCSR-SPYQVSKVINKSL 105
                      56778899999****************************.899999999**********976666.8999**********.************* PP

  AcetylCoA_hydro 100 nqglvsfvdkhlsevpqklekgfvp........iDvalieataldedGylnlG..vg......vrakKviiEv.......aelvvivvkknpPr 170
                      n+g ++f d  l  ++++l+ g+ +        +D+a++eat + ++G l++G  vg       +a+K ++E+        ++++  v+  pP+
       EPX71497.1 106 NNGKIDFHDHSLIDFAEQLTSGYLGakdgkpqtLDIAIVEATEITPEGNLVPGasVGvtpeliQVADKLVVEMntnspslRGIHDLCVPASPPY 199
                      *****************************************************7755889998899**************************** PP

  AcetylCoA_hydro 171 vngydelialdkv..dyivvdpekvvavve 198
                      +n+ + +   d++    i+ dp+kv+ +ve
       EPX71497.1 200 RNPLNVCTSSDRIgqTEIPLDPKKVIGIVE 229
                      **************999**********997 PP

>> CitF  Citrate lyase, alpha subunit (CitF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       0.4   2.4e+03      34      77 ..     279     319 ..     271     327 .. 0.74
   2 !   20.1   0.2   4.1e-08   0.00024     320     403 ..     360     450 ..     350     473 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 0.4
        CitF  34 lvvnlvleviaelGiknltlasssltdvheplvehiknGvvtki 77 
                  + n v+e + +  ++nl++ +  l+d+    ++ +k G v   
  EPX71497.1 279 AIANSVIEGLGNSSFRNLQVWTEVLQDSF---LDLLKSGTVQYA 319
                 57899999999999999999999888765...455566666555 PP

  == domain 2  score: 20.1 bits;  conditional E-value: 4.1e-08
        CitF 320 drldvvils.aleidtkfnvnvltGsdGvirGasGGhcdtaaaaklsiivaplvrGr......iptvveevttvitpGesvdvlvtdvGia 403
                  rl  + l   +e+d    vn  +     +   +GG  d    aklsi+ +p vr        i+t+v++vt v    + +d++vt++G+a
  EPX71497.1 360 RRLGCISLNtPVEVDLYGHVNSTCVMGTRMLNGIGGSGDFMRNAKLSIMHTPSVRPTktdpigISTIVPKVTHVDHTEHDIDIVVTEQGLA 450
                 5666555541478888888887776666677789*********************7444454599************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (521 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       423  (0.0235931); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 3903.36
//
Query:       EPX71498.1  [L=595]
Description: transcription factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.5e-21   75.1   3.0      8e-21   74.2   3.0    1.4  1  Fungal_trans  Fungal specific transcription factor domain
    5.7e-10   39.2  12.0      1e-09   38.3  12.0    1.4  1  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.2   3.0     9e-25     8e-21       2     187 ..     182     354 ..     181     394 .. 0.88

  Alignments for each domain:
  == domain 1  score: 74.2 bits;  conditional E-value: 9e-25
  Fungal_trans   2 drffsnfhpqfpilhkpsflpktssenssksayasplll..lailalGalfsesetkesnssltsesqefiafplraeilihedfsspssslwilqs 96 
                   + +f ++++++pi+ +++f+ + ++    +++ +   l+  +aila++ + s++e+ ++   l + s     f+ ++  ++  + +   ++++ +q+
    EPX71498.1 182 QWYFRYINCWWPIFYEDDFMAELHKLYEDPNQTKGVWLVsfYAILAVAISRSKMEDDQK---LAE-S----FFCASWYLIQ-KPGFFLIPQVEKIQA 269
                   67*********************555556666666666688*******99999999997...222.2....2466887777.666666666****** PP

  Fungal_trans  97 LlllelyektssdralherhhgvavrlarslgLhrnpsyvgkkslwklweeeaesrrRlwwaaFylDktialklGrppllddsqinlpLPc 187
                   L+++  +   +s  +l+  ++g ++ + r+l Lhr +s  +      l++ +ae  rR++w +++l++t++l++G p+ l+d +i++ +P+
    EPX71498.1 270 LVIMIQFTAHLSLFTLCKALCGQVCLMIRDLNLHRASSTLK------LPKRTAELYRRIFWVCYVLEITTSLVFGTPSVLSDMEIDCGYPD 354
                   *****************************************......*******************************99********997 PP

>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.3  12.0   1.1e-13     1e-09       1      39 [.       9      46 ..       9      47 .. 0.95

  Alignments for each domain:
  == domain 1  score: 38.3 bits;  conditional E-value: 1.1e-13
                SS-HHHHHCT---STSSSS-HHHHHCTHHHCCCCTCCCE CS
     Zn_clus  1 haCdnCrkkKvKCdakkPaCsnCkklnleCtfysesskr 39
                +aCd Cr+kK++C+++ P C+nC  +n  C  ys++ kr
  EPX71498.1  9 KACDFCRRKKIRCNRELPRCQNCLVYNEACH-YSKRLKR 46
                59*****************************.9999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (595 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       648  (0.0361426); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.31s 00:00:00.87 Elapsed: 00:00:00.46
# Mc/sec: 3882.10
//
Query:       EPX71499.1  [L=538]
Description: hypothetical protein SOCG_01716 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.6e-49  166.7  56.0      9e-49  166.4  56.0    1.0  1  AA_permease_2  Amino acid permease
    2.3e-21   76.0  51.0    3.2e-21   75.5  51.0    1.1  1  AA_permease    Amino acid permease


Domain annotation for each model (and alignments):
>> AA_permease_2  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.4  56.0     1e-52     9e-49       1     425 []      61     504 ..      61     504 .. 0.81

  Alignments for each domain:
  == domain 1  score: 166.4 bits;  conditional E-value: 1e-52
  AA_permease_2   1 lsllsafalvigsv......igsgifvknlaasggpalilwvw.iavligslavllvyaElssalprsgGiyvytkaafgkkvaflsawfnwfayv 89 
                    +s+ls+f+ ++g++       gs if    a + gp  ++w w ++++++ l+v++ + El+sa+p+sg +y + ++++++k   + +w++ +  +
     EPX71499.1  61 FSYLSVFGQSFGAMglcpsiSGSLIF----AMNCGPGGMVWSWfLGCFCL-LPVSISMSELASAMPTSGSLYYWIAKLSPPKYRAFLSWLLGYVSM 151
                    799***********777653334444....55777776666552777777.9*********999***************99999888888877777 PP

  AA_permease_2  90 p...vlasilsvaasyllnal....gpdlqgntwltyliaiaililvalinirgikesakiqnilgilkillpliiliilglitvdgggfsslste 178
                    +   + ++++++aas+ll a+    +p +  +++ +y+i+ a+ +   +++++ +k +a+++++++ + +  + +i+ii   +  + ++ +s    
     EPX71499.1 152 LaygTGFASTVYAASSLLVAVisigNPGYSATKYEQYGIYLAFSLASSFLIAMPTKYLAYFNKFCVFFQT-CTALIVIISLAASSSSHTRTS---- 242
                    62223344567788888777645545688999**************************************.576666655555555566665.... PP

  AA_permease_2 179 tdtffpngwpgv.........llgllivlwsfdGfesaanvseevkk.k.dvpkaifigllivlvlyllvniaflgvvpddeianlsn.lgs.vaa 261
                     +++f+++++ +         ++++++ +w+++Gfes+a v+ee+ +    +p+a++++ll +lvl++ v i++ + ++ d  a  ++ +g+ v++
     EPX71499.1 243 AKYIFTTFSNYSqwknmgwafIMSITTPVWVVSGFESCATVAEEATNpSvAAPIALISSLLAALVLGFCVIITICATMGFDFEAIMNSpTGEpVIQ 338
                    445555554432223334444889999*****************9986447******************99998888888654332222444268* PP

  AA_permease_2 262 lffeavggkvvaiivvilialsllgaintavigssrvlealardgvlP..rffakvnkfgspiraiiltaivslillllfllassaaynfllsvss 355
                    ++++++g + +   v+ +++++l+++   ++ig++r ++a++rdg+lP  r+++k+   g pi+aii + i++++++ll+l+ +saa++ +++++ 
     EPX71499.1 339 VLLNNLG-TNGCLGVASVLIVALCLNCSCLCIGATREVFAFSRDGGLPgsRYLSKITSSGVPINAIIGVDIYTFLIGLLMLI-NSAAISSVFNLAI 432
                    ******9.77777777799******************************************************999988877.58*********** PP

  AA_permease_2 356 lgliisyllliigalilrkkrphl...krpgkilvaiigalfllfllvalffppkgpatqssliytiiltval 425
                    ++l+++y l+++++++  + +p +   +r+   ++ai+++ +l f+ ++lffp+ ++ ++ +++++ii+++++
     EPX71499.1 433 IALFVIYSLPFLARILFDRFQPGKfycGRFS-KPLAIFSVAWLWFIAIMLFFPSYQHPNKMEMNWAIIVFIFV 504
                    **********988875544445443677775.68**********************************99985 PP

>> AA_permease  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.5  51.0   3.5e-25   3.2e-21      17     459 ..      81     511 ..      66     518 .. 0.78

  Alignments for each domain:
  == domain 1  score: 75.5 bits;  conditional E-value: 3.5e-25
  AA_permease  17 vglgvvlsqaGplgallayllagvviflvmlslgeiatngpksggfytyasrflgpelGfviGln....ylfswitvlaleltaasiliqfwelvtdl 110
                   g+ + + ++Gp+g++ ++ l++++++ v +s++e+a+++p sg+ y+++++   p+   + +++     ++ + t++a  + aas+l+  + ++  +
   EPX71499.1  81 SGSLIFAMNCGPGGMVWSWFLGCFCLLPVSISMSELASAMPTSGSLYYWIAKLSPPKYRAFLSWLlgyvSMLAYGTGFASTVYAASSLLVAVISI-GN 177
                  566777889************************************************99999999887734444455555555555555554222.22 PP

  AA_permease 111 pkawvt.......gavflvvlliinlvgvkvygeaefilalikiiaiiafiivgiillaggkpnkgagfrflgdngsifknnlppgfa.keeegafkn 200
                  p   +t        + f ++ +++  +  k+ + +  +  ++   +++++ii ++ ++++  ++ +      ++  +    +++++ + k+ +    +
   EPX71499.1 178 PGYSATkyeqygiYLAFSLASSFLIAMPTKYLAYFNKFCVFFQTCTALIVIISLAASSSSHTRTSA------KYIFT----TFSNYSQwKNMG---WA 262
                  323333555555577788888888888888888887777777777777777777555555555555......23333....333332222222...57 PP

  AA_permease 201 fisvfvivvfaftGielvaiiagEvkdPeksiPkailqvviritifYvlsllligllvprndlgllndsasaaspfvifikesgvsvlaplinavilt 298
                  fi+ + + v   +G+e+ a++a+E+ +P+ + P+a ++ ++  +++  +++++i ++++ +   ++n s ++ + + + ++++g ++   +  ++i +
   EPX71499.1 263 FIMSITTPVWVVSGFESCATVAEEATNPSVAAPIALISSLLAALVLGFCVIITICATMGFDFEAIMN-SPTGEPVIQVLLNNLGTNGCLGVASVLIVA 359
                  99999999999********************************************************.7777899999********987765555555 PP

  AA_permease 299 aalssansslysasRvlyslakdglaP..kvlkkvskrgvPlraillsmiisllalllaslnlaapivfnfllaisaliglivwlliilsyl...rfR 391
                   +l+++  + + a+R ++++++dg +P  ++l+k++ +gvP++ai+ + i  +l+ ll+ +n+a   ++  + +++ ++ ++++ l  l+ +   rf 
   EPX71499.1 360 LCLNCS-CLCIGATREVFAFSRDGGLPgsRYLSKITSSGVPINAIIGVDIYTFLIGLLMLINSA---AISSVFNLAIIALFVIYSLPFLARIlfdRFQ 453
                  555554.455789**********************************************9*999...5555566666677777777666666567999 PP

  AA_permease 392 kalkyqgrsieelgfkaallplgvilvlaaliiillilalyayltvkkgpkdwgaasfaaaylivllf 459
                  + ++y gr          +   ++i+ +a l++i+++l++  y+   k++ +w  ++f+++ l  +++
   EPX71499.1 454 PGKFYCGR----------FSKPLAIFSVAWLWFIAIMLFFPSYQHPNKMEMNWAIIVFIFVCLFCVVY 511
                  99999999..........88899999************************999999888877666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (538 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1191  (0.0664287); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.35s 00:00:00.99 Elapsed: 00:00:00.49
# Mc/sec: 3316.68
//
Query:       EPX71500.1  [L=393]
Description: agmatinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-88  295.4   0.0    5.3e-88  295.2   0.0    1.0  1  Arginase  Arginase family
  ------ inclusion threshold ------
      0.085   13.1   0.1       0.12   12.5   0.1    1.2  1  UPF0489   UPF0489 domain


Domain annotation for each model (and alignments):
>> Arginase  Arginase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  295.2   0.0   5.9e-92   5.3e-88       2     277 ..      81     378 ..      80     380 .. 0.94

  Alignments for each domain:
  == domain 1  score: 295.2 bits;  conditional E-value: 5.9e-92
                 EEEEEEEE--TTTSSSGGGGGHHHHHHHHHHTSBTHCHEETTTTE...SCCSEEEEEEEEE--SSCHHHHHHHHHHHHHHHHHTTCEE........... CS
    Arginase   2 dvallGvPfdaagsgrpGarfGPraireasarleealeynlelgv...leelkivdlgdvavtpvdneevleqieeavaeilkagklp........... 86 
                 d+a++G+Pfd+++s+rpGarfGP+ ire+s+rl++al yn+ l+v   ++++++vd+gdv+++ ++ +++++++ee ++++l+++ +            
  EPX71500.1  81 DIAFVGAPFDMGTSYRPGARFGPSGIREGSRRLDPAL-YNVPLNVypfQSWANVVDCGDVPMSNYHIPNAMKELEEGYYHLLTRKPTSfhdregyarng 178
                 89********************************755.68888889999***********************************555566666777777 PP

                 ......EEEESSGGGHHHHHHHHHHHHSTTEEEEEESSS----SSC.....TTTBSSSTTSHHHHHHHHTSECGCEEEEEEE-STCSH..HHHHHHHTT CS
    Arginase  87 ......ivlGGDHsialgilralaekygkplgvihfDAHaDlrtpe.....tegsgnshGtpfrraaeegllkpkklvqiGirsvdne..eyelakelg 172
                       +++GGDH+i l+ilral+++y++p++vihfD+H+D ++p       +++g++hGt+f+ a++eg+l+++  +++Girs+ ++  +ye+++++g
  EPX71500.1 179 tvlprlLTMGGDHTIVLPILRALHRVYDRPISVIHFDSHLDSWKPGilgdgVDNDGLNHGTYFYWASKEGVLSKDANIHAGIRSPLSGlkDYEDDATCG 277
                 777788****************************************8888877889***************************************9*** PP

                 SEEEEHHHHHHHHHHHHHHHHHHHHTCTTSEEEEEEEGGGBBTTTSTSSSS-BSS-B-HHHHHHHHHHHHCHSEEEEEEEE-B-GGGSSTTTHHHHHHH CS
    Arginase 173 irvitmreidelglkavveeilervgaeedpvylSfDiDvlDpavaPGtGtpepgGltlrellallrelaeklnlvgaDvvEvnPaldteaeqtarlaa 271
                 ++vi++reid++g++ vv++i++rv+  ++ vylS+DiD lDpa+aP+tGtpe  G+++re+ +++r+l++ ln+vgaD+vEv+P++d  ae t+++aa
  EPX71500.1 278 FQVIEAREIDKIGVEGVVKRIRDRVQ--DNLVYLSIDIDTLDPAYAPATGTPEIAGWSSREFTDIIRGLNG-LNFVGADIVEVSPSYDV-AELTTLTAA 372
                 *************************7..57*****************************************.*****************.67******* PP

                 HHHHHH CS
    Arginase 272 rlvrel 277
                 ++++++
  EPX71500.1 373 NILFDI 378
                 ***995 PP

>> UPF0489  UPF0489 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   1.4e-05      0.12       7      41 ..     191     223 ..     187     271 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.4e-05
     UPF0489   7 HheaLeaiyraigskklpsdlslvHlDaHpDllip 41 
                 H+ +   i ra+ + +  +++s++H+D+H D   p
  EPX71500.1 191 HTIV-LPILRALHRVY-DRPISVIHFDSHLDSWKP 223
                 4444.45777877775.89************7655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (393 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       272  (0.015171); expected 358.6 (0.02)
Passed bias filter:                      269  (0.0150036); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 2692.72
//
Query:       EPX71501.1  [L=237]
Description: DNA-3-methyladenine glycosylase Mag1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.5e-19   68.6   0.1    1.2e-18   67.6   0.0    1.6  2  HhH-GPD   HhH-GPD superfamily base excision DNA repair protei
     0.0029   18.2   0.1       0.66   10.6   0.2    2.9  3  HHH_5     Helix-hairpin-helix domain
  ------ inclusion threshold ------
       0.17   11.0   0.0       0.21   10.7   0.0    1.1  1  DUF4317   Domain of unknown function (DUF4317)


Domain annotation for each model (and alignments):
>> HhH-GPD  HhH-GPD superfamily base excision DNA repair protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.6   0.0   1.9e-22   1.2e-18       1     108 []      57     203 ..      57     203 .. 0.97
   2 ?   -3.2   0.0       1.9   1.1e+04      82     104 ..     206     230 ..     205     233 .. 0.60

  Alignments for each domain:
  == domain 1  score: 67.6 bits;  conditional E-value: 1.9e-22
                 HHHHHHTTS-HHHHHHHHHHHHHHHS....HCSHHHHHHSHHHHHHHHHTTSTTHHHHHHHHHHHHHHHH............................. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............................. RF
     HhH-GPD   1 vsailsqqtsderanriierlferfg....fptpedladadeekLrelirelGfyrrKakyikelArilv............................. 66 
                 + a++ qq++ ++a +i+er++++ g    fp+p++++++d ekLr++    Gf+ rK + i+++A++ +                             
  EPX71501.1  57 IQAVAGQQLHKKAADTIYERFKSL-GtdghFPSPQKILEMDLEKLRSC----GFSARKTETIRSIAEATItgvvpsrkaaealtddelierltkikgig 150
                 578999******************.66*********************....*********************************************** PP

                 ............S-SSS--TTSHHHHHHHHHHTTSSSSTTHHHHHHHHHHHHHT CS
                 ............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
     HhH-GPD  67 ............gkpdvlivvDvhvrrilkrlrsikekktkkkvekkleellep 108
                             ++pd+++++D+ +r++++ l+ +k+ +tkk v +k  e+++p
  EPX71501.1 151 rwtvemllifslNRPDIMPADDLIIRNGFRYLHNLKTIPTKKYVLEKS-EICAP 203
                 *********************************************999.88765 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.9
                 HHHHHTTSSSS..TTHHHHHHHHHH CS
                 xxxxxxxxxxx..xxxxxxxxxxxx RF
     HhH-GPD  82 ilkrlrsikek..ktkkkvekklee 104
                 ++  ++++k+   +++ kv  kl +
  EPX71501.1 206 SVAAWYLWKTAklPDYVKVNSKLTK 230
                 5666777777745566666666655 PP

>> HHH_5  Helix-hairpin-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.98   5.8e+03      43      55 ..      65      77 ..      54      79 .. 0.65
   2 !    4.7   0.0    0.0077        46      22      52 ..      84     114 ..      67     120 .. 0.84
   3 !   10.6   0.2   0.00011      0.66      27      52 ..     132     158 ..     110     163 .. 0.75

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.98
                S-HHHHHHHHHHH CS
       HHH_5 43 iGkktAeriilel 55
                + kk A+ i +  
  EPX71501.1 65 LHKKAADTIYERF 77
                4578888888765 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.0077
                 T.--SHHHHHHS-HHHHHTSTTS-HHHHHHHH CS
       HHH_5  22 G.iesvedlaaadveeLakipGiGkktAerii 52 
                 G + s+++++++d e+L +  G+++++ e i 
  EPX71501.1  84 GhFPSPQKILEMDLEKLRSC-GFSARKTETIR 114
                 44899*************99.99999888874 PP

  == domain 3  score: 10.6 bits;  conditional E-value: 0.00011
                 HHHHHS-.HHHHHTSTTS-HHHHHHHH CS
       HHH_5  27 edlaaad.veeLakipGiGkktAerii 52 
                 e+l + + +e+L+ki+GiG  t+e ++
  EPX71501.1 132 EALTDDElIERLTKIKGIGRWTVEMLL 158
                 44444444699********99999875 PP

>> DUF4317  Domain of unknown function (DUF4317)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   3.5e-05      0.21     233     312 ..      47     122 ..      31     163 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 3.5e-05
     DUF4317 233 eeqketFqeivkevlgeelekevvkeiqeelnemieekkeeeeeepltldkkeikkiLeesgveeeklekiekafeeafg 312
                 +  ke ++e+++ v+g++l+k+   +i+e+++++ ++ +    + p ++ + +++k L+++g +  k+e+i +  e+++ 
  EPX71501.1  47 NPSKEPYEELIQAVAGQQLHKKAADTIYERFKSLGTDGH---FPSPQKILEMDLEK-LRSCGFSARKTETIRSIAEATIT 122
                 5679******************************87766...47888888889888.799**********9998887775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       464  (0.0258799); expected 358.6 (0.02)
Passed bias filter:                      426  (0.0237604); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.29s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 1555.41
//
Query:       EPX71502.1  [L=320]
Description: DUF1749 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
     2e-102  342.3   0.0   2.5e-102  342.0   0.0    1.0  1  DUF1749        Protein of unknown function (DUF1749)
     0.0012   18.6   0.2     0.0017   18.0   0.2    1.3  1  Abhydrolase_1  alpha/beta hydrolase fold
     0.0032   17.0   0.0     0.0069   15.9   0.0    1.5  1  Peptidase_S9   Prolyl oligopeptidase family
     0.0059   15.9   0.0      0.011   15.0   0.0    1.4  1  Hydrolase_4    Serine aminopeptidase, S33
  ------ inclusion threshold ------
      0.024   13.8   0.0      0.059   12.5   0.0    1.6  2  LCAT           Lecithin:cholesterol acyltransferase
      0.065   13.8   0.0      0.095   13.3   0.0    1.5  1  Abhydrolase_6  Alpha/beta hydrolase family


Domain annotation for each model (and alignments):
>> DUF1749  Protein of unknown function (DUF1749)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  342.0   0.0  8.5e-106  2.5e-102       4     299 .]      10     318 ..       7     318 .. 0.94

  Alignments for each domain:
  == domain 1  score: 342.0 bits;  conditional E-value: 8.5e-106
     DUF1749   4 kkapgllheyaerlvafeyetsgel..kska....llFigGLgdGlltvpyvkelanaldeagwsvvelqlsssyggwGtgsLkrDaeeieklveYlkk 96 
                 ++ pg+lh+y+++lv fe+ +s++    s+     llF+gGLgdGlltvpyv  l+++ld+ gwsvv+++++ssy+gwGtgsL rD+e+++k+v+++ +
  EPX71502.1  10 SSFPGILHQYTSKLVGFEFIGSSGKtiSSNKerplLLFVGGLGDGLLTVPYVPSLVEPLDKLGWSVVQVNTQSSYIGWGTGSLVRDDEDLHKAVDFFAH 108
                 5678***************98876423444377889*************************************************************** PP

     DUF1749  97 tksG.eekkekvvlmGHstGsqdvlyYltssnerdrekvdgailqapvsDReailkvleerkklkelvalakkl.vdkgkaeeilprelaekvgletpv 193
                   +G + + +k+vlmGHstGsq+vlyYl++s     +++ +ai+qa+vsDRe ++++++  +k++ lva+++k+ ++kg ++++lpr+++++ + +tpv
  EPX71502.1 109 L-GGaDYNSRKIVLMGHSTGSQNVLYYLSQSPL--DNHLAAAIAQASVSDREGCYNTIGV-DKTEALVAWVQKEyIEKGLGDDVLPRSKVAHSMGDTPV 203
                 *.566**************************77..99**********************9.99********9999***************99999**** PP

     DUF1749 194 sarRflsLasvdgdDDfFssDlsdeklektfGkvke........pllillsekDefvpesvdkedllerwkeavkkkewsee.sGiipgAsHnveeesa 283
                 sa+Rf++L+s++g DDfFs+Dl+ ++++ktfG++k          l + +sekDef+++sv++e++++r++ea++ ++++++ sG+ipgA+Hnv+e s+
  EPX71502.1 204 SANRFMDLVSIRGRDDFFSTDLTPDDFAKTFGSIKPitgtndysRLALFMSEKDEFLAKSVNREEIVQRFREAIRPSTSNSDaSGVIPGATHNVGEASE 302
                 ***********************************99******8888899*************************77777766**************** PP

     DUF1749 284 eeaqkelvervlsflk 299
                   a ++l+e+++  lk
  EPX71502.1 303 PGALEWLIEHLVKVLK 318
                 **********998876 PP

>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.2   5.8e-07    0.0017       2     106 ..      43     152 ..      42     175 .. 0.83

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 5.8e-07
                    EEEEE-STTTCGGG..GTTGHHHHHHHHTTSEEEEEE..ETTSTTSSSTTTGB.CHHSHHHHHHHHHHH.HHHCTTSSEEEEEETHHHHHHHHHHH CS
  Abhydrolase_1   2 vlvilhGlpgssdv..waerglapaLakdgfdvillD..lrGvgySspapacinddygtasvaddldri.ldalgddkltlvGhSmGGmialayaa 92 
                    +l+++ G++g + +  ++ ++l++ L+k g+ v+ ++  +   g+++ ++    dd  +    d++  +  + ++ +k++l+GhS G++ +l+y++
     EPX71502.1  43 PLLLFVGGLGDGLLtvPYVPSLVEPLDKLGWSVVQVNtqSSYIGWGTGSLVR--DDEDLHKAVDFFAHLgGADYNSRKIVLMGHSTGSQNVLYYLS 136
                    445555555533333599999*****999****9999555788999999988..8888877888888889************************** PP

                    HH..GGGEEEEEEESE CS
  Abhydrolase_1  93 ey..perVkalvllga 106
                    +   +++ +a ++ ++
     EPX71502.1 137 QSplDNHLAAAIAQAS 152
                    **99899999988887 PP

>> Peptidase_S9  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   2.3e-06    0.0069      46     122 ..      97     174 ..      92     186 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 2.3e-06
                   HHHHHHHHHHHHTT..S--GGGEEEEEETHHHHHHHHHHHH-G..GG-SEEEEESE---CCCHHCSTTSTHHHCCCC--TT CS
  Peptidase_S9  46 dDfiaaaealakeg..yvdserlaitGgSyGGyltgaalnqrp..dlFkaavaevpvvdvlrydsdtdllteeymewgnpe 122
                   +D+ +a++++a  g    +s++++++G+S G ++++  l q p  +  +aa+a+++v+d    + +   ++   +e   ++
    EPX71502.1  97 EDLHKAVDFFAHLGgaDYNSRKIVLMGHSTGSQNVLYYLSQSPldNHLAAAIAQASVSDREGCYNT---IGVDKTEALVAW 174
                   7999********99888899********************876548899**********9988887...555555555554 PP

>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   3.6e-06     0.011      61     110 ..     102     153 ..      79     209 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 3.6e-06
  Hydrolase_4  61 Dlaafvekvk.eehpelplfllGhSmGGliallyllrypd..kvaglilsaPa 110
                   ++ f+ ++  ++++ ++++l+GhS+G+  +l yl + p   ++a++i  a++
   EPX71502.1 102 AVD-FFAHLGgADYNSRKIVLMGHSTGSQNVLYYLSQSPLdnHLAAAIAQASV 153
                  333.4455555899999******************888864456666665554 PP

>> LCAT  Lecithin:cholesterol acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0     2e-05     0.059     119     142 ..     115     138 ..      96     153 .. 0.81
   2 ?   -2.3   0.0      0.62   1.9e+03     125     133 ..     193     201 ..     177     211 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 2e-05
        LCAT 119 sgkkvvliaHSmGnllvlyflkwv 142
                 + +k+vl++HS G+++vly+l + 
  EPX71502.1 115 NSRKIVLMGHSTGSQNVLYYLSQS 138
                 5689*****************984 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.62
        LCAT 125 liaHSmGnl 133
                  +aHSmG  
  EPX71502.1 193 KVAHSMGDT 201
                 59*****75 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   3.2e-05     0.095      42     209 ..      94     297 ..      45     307 .. 0.45

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 3.2e-05
                    GCS--HHHCHHHHHHHCCTT........TTSEEEEEETCHHHHHHHHHHCC..........EEEEES-..----TTT........S----TTHHHH CS
  Abhydrolase_6  42 pppldledladlaalldelaa......gggpvvlvGHSlGGalalaaapla........lvvgvlldppptalpagl........laaalelllal 115
                    +      d +dl+ ++d +a+      + +++vl+GHS G   +l    ++        l ++++ ++  ++++ g           a+++++++ 
     EPX71502.1  94 R------DDEDLHKAVDFFAHlggadyNSRKIVLMGHSTGSQNVLY---YLsqspldnhLAAAIAQAS--VSDREGCyntigvdkTEALVAWVQKE 178
                    2......2355555555555555577799999********997776...3333355554333355555..22222223333223222222222222 PP

                    HH..TT-CCCCHCCH..........S-HS.CCCCHHHCCCCHCHCCCGHHHHCCHHCHTTCCHHTT-TTGC.............EEECTT-C.... CS
  Abhydrolase_6 116 la..llrllawlsre..........plpr.lfladedadaawrarlarlaallaglgllpaaawadlpvpl.............lvlggeDp.... 181
                    +    l ++ +++ +          +    +f++ ++             + + +   l+++++a +  ++             l + ++D+    
     EPX71502.1 179 YIekGLGDDVLPRSKvahsmgdtpvS--AnRFMDLVS----------IRGRDDFFSTDLTPDDFAKTFGSIkpitgtndysrlaLFMSEKDEflak 262
                    22221111222211111111112111..112222222..........1111111111222333333333333333333333322444555554444 PP

                    ......HHHHCHHCCCH..STTEEETCE...SSS-H CS
  Abhydrolase_6 182 ......lvprllerlla..qagarlpvvlpgaGHlp 209
                          +v+r+ e++    +++     v+pga H +
     EPX71502.1 263 svnreeIVQRFREAIRPstSNSDAS-GVIPGATHNV 297
                    4444433333333333344333333.5666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       415  (0.0231469); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.59u 0.35s 00:00:00.94 Elapsed: 00:00:00.53
# Mc/sec: 1804.64
//
Query:       EPX71503.1  [L=841]
Description: translation elongation factor 2 Eft2,B [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.3e-65  218.2   0.2      1e-64  217.6   0.2    1.2  1  GTP_EFTU     Elongation factor Tu GTP binding domain
    1.2e-30  105.7   0.0    3.1e-30  104.4   0.0    1.7  1  EFG_IV       Elongation factor G, domain IV
    1.2e-19   70.1   0.0    3.1e-19   68.8   0.0    1.7  1  EFG_C        Elongation factor G C-terminus
    9.1e-14   51.3   0.0    2.3e-13   50.0   0.0    1.6  1  EFG_II       Elongation Factor G, domain II
    5.2e-13   49.2   0.0    1.7e-12   47.5   0.0    2.0  1  GTP_EFTU_D2  Elongation factor Tu domain 2
    0.00031   20.8   0.1    0.00065   19.8   0.1    1.6  1  MMR_HSR1     50S ribosome-binding GTPase


Domain annotation for each model (and alignments):
>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  217.6   0.2   3.5e-68     1e-64       2     194 .]      18     344 ..      17     344 .. 0.93

  Alignments for each domain:
  == domain 1  score: 217.6 bits;  conditional E-value: 3.5e-68
                 CEEEEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHHHHHSTHCHSHHHHHHTSCSSCEEEEEE..............TTCSSEEEEEEEESSSGGGHHH CS
    GTP_EFTU   2 rirnigiighvDhGKtTLtdrLlyktgaiskkgekaeeervlDtlkeErergiTiksaaisle..............ketkkylinliDtPGHvdFske 86 
                 ++rn+++i+hvDhGK+TLtd+L++k+g+is   +ka+++r++Dt+++E+erg+Tiks+aisl+              ++  ++l+nliD+PGHvdFs+e
  EPX71503.1  18 NVRNMSVIAHVDHGKSTLTDSLVQKAGIISA--AKAGDARFMDTRADEQERGVTIKSTAISLFaemsqddmkdvkepTTHPDFLVNLIDSPGHVDFSSE 114
                 79*****************************..778889***********************************9766999****************** PP

                 HHHHHHT-SEEEEEEETTTBSTHHHHHHHHHHHHTTTEEEEEEESCGSTHHHHHHHHHHHHHHHHHH...............HHHHHHHHHTTTTTEEE CS
    GTP_EFTU  87 virglrvlDgavlvvdaveGvepqteevlrlalkegvpiivfiNKmDrlkaelkeiveevkqklsrk...............eeklekygekgekevpv 170
                 v+++lrv+Dga++vvd  eGv++qte+vlr+al e+++++v++NK+Dr+  el+ ++ee++q++ r+                +++++++    ++ +v
  EPX71503.1 115 VTAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIKPVVVVNKVDRALLELQISKEELYQNFARVvesvnvvistyydkvLGDCQVFP----DQGTV 209
                 ****************************************************************88866666666666655555555555....5567* PP

                 EEEBTTTTBTHH....................................................................................... CS
    GTP_EFTU 171 vfgSalkgegvk....................................................................................... 182
                 +fgS+l+g++++                                                                                       
  EPX71503.1 210 AFGSGLHGWAFTvrqfanryakkfgidrnkmmtrlwgesyfnpktkkwsksavdaegnenqrafnmfildpiyrifdavmngrkdevfalltklevnlk 308
                 *********99999999999999999999999********************************************************99999999999 PP

                 ........................HHHHHHHHHSHH CS
    GTP_EFTU 183 ........................tllealvellps 194
                                         +l+e++v +lps
  EPX71503.1 309 pdekeldgkallkvvmrkflpaanALMEMIVLHLPS 344
                 999999999999999999999999999999999986 PP

>> EFG_IV  Elongation factor G, domain IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.4   0.0     1e-33   3.1e-30       2     120 ..     604     719 ..     603     720 .. 0.96

  Alignments for each domain:
  == domain 1  score: 104.4 bits;  conditional E-value: 1e-33
                 CCESCEE.SS-CCHCCCCCCCHTSSSHCCCCCEEEECCTTTTSSEEEEE--STCCCHCCCCHHHHCCCCCCTTS-TTTS--EESEEEEEEEEE--T..T CS
      EFG_IV   2 qVayrEtirkpvkereeklkkqsggdgqyakvileiePleegsgnefvdetkggqvpkeyieavekGfqealkeGplagepvtdvkvtLldgslhe..v 98 
                 +++ r    ++ k+r++++++++g+d  +a++i++++P++ ++ n +vd+tk +++++e++++v+++fq+a+keGpl++e+++ ++ ++ld++lh+  +
  EPX71503.1 604 KINPR----DDFKARARVMADEYGWDVSDARKIWCFGPET-TGANLVVDQTKAVSYLNEIKDSVVAAFQWATKEGPLFEENLRSCRYNILDVVLHAdaI 697
                 67777....899**************************76.********************************************************** PP

                 TC-HHHHHHHHCHHHHHHHHCC CS
      EFG_IV  99 dsseaafkpaarralkeallkA 120
                 ++++++++p+arr+++++ l A
  EPX71503.1 698 HRGGGQIIPTARRVVYASTLLA 719
                 ****************998876 PP

>> EFG_C  Elongation factor G C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.8   0.0     1e-22   3.1e-19       2      86 ..     723     808 ..     722     810 .. 0.97

  Alignments for each domain:
  == domain 1  score: 68.8 bits;  conditional E-value: 1e-22
                 EEEEEEEEEEEEECCCCCCHHHHHHHCT-EEEEEEEE..TTEEEEEEEEEGGG-TTHHHCHHHCTTTS-EEEEEEEEEEE--HHHH CS
       EFG_C   2 llEPivkveievpeeyvgkvisdlssrrGeiedmeqd.asgrviieaeiPlaeligfateLrslTkGegsfsmefsgYeevpgdkl 86 
                 + EP++ vei+v+e  +g ++s l+++rG++   eq+ ++    i+a +P++e++gf  eLr++T G++  ++ f++++++ gd+ 
  EPX71503.1 723 IQEPVFLVEIQVSEGAMGGIYSVLNKKRGQVFAEEQRvGTPLYNIKAYLPVNESFGFTGELRQATGGQAFPQLVFDHWSPMSGDPT 808
                 89***********************************99*******************************************9975 PP

>> EFG_II  Elongation Factor G, domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.0   0.0   7.8e-17   2.3e-13       3      66 ..     485     547 ..     484     554 .. 0.93

  Alignments for each domain:
  == domain 1  score: 50.0 bits;  conditional E-value: 7.8e-17
      EFG_II   3 ePvislaiepkskadedklskaLarlleEDptlrverdeeTketilsGmGelHleivverlkre 66 
                  Pv+++a+e k+ +d  kl + L+rl++ Dp + ++++ e++e i++G GelHlei ++ l++ 
  EPX71503.1 485 SPVVQVAVEVKNGNDLPKLVEGLKRLSKSDPCVMTTTN-ESGEHIVAGAGELHLEICLNDLQES 547
                 59******************************977665.8*******************99975 PP

>> GTP_EFTU_D2  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.5   0.0   5.7e-16   1.7e-12       2      74 .]     393     469 ..     392     469 .. 0.94

  Alignments for each domain:
  == domain 1  score: 47.5 bits;  conditional E-value: 5.7e-16
                  EEEEEEEEESEEETTEEEEEEC.TCTTSEE...EEEEEEEEEEETEEESEEETTSEEEEEEEESSCCSGSSTTCEEE CS
  GTP_EFTU_D2   2 tvalgrvysGtlkkGdevrilg.ndtskke...ivtrissletfhededeavaganaGvivaikgledaiivGdtlt 74 
                  ++a+grv+sGt++ G++vri g n+t++k+    +  i+++  +++ +  +++ ++aG+ ++++g+++ ++++ tlt
   EPX71503.1 393 FYAFGRVFSGTVRSGMKVRIQGpNYTPGKKedlFIKAIQRTVLMMGSKIDPIEDCPAGNVIGLVGIDQFLVKSGTLT 469
                  579**************************9***999999999999***********************888888885 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.1   2.2e-07   0.00065       7     114 .]      27     159 ..      21     159 .. 0.67

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 2.2e-07
                 STTSSHHHHHHHHHTS.TEEESSSTTSSSSEEEEEEEETTEE..................................EEEEECGGCSSHHHHHHHHHHHH CS
    MMR_HSR1   7 rpNvGKStLinaltge.kaivsdkpgtTrdinegrvklkgke..................................ielvDtpGliegaseekglgkaf 70 
                 +   GKStL  +l+++   i ++k+g  r + ++  + +  e                                  ++l+D pG ++       ++ ++
  EPX71503.1  27 HVDHGKSTLTDSLVQKaGIISAAKAGDARFMDTRADE-Q--ErgvtikstaislfaemsqddmkdvkeptthpdflVNLIDSPGHVD-------FSSEV 115
                 5678***********8334557778888888776433.1..12345666677788888888899999999999999********665.......66666 PP

                 HHHHC.TSEEEEEEETTTTCSHHHH.HHHHHHHHHTTSEEEEEEES CS
    MMR_HSR1  71 lalee.adlillvvdaseeklkpld.eeleelleeakkplilvlnk 114
                  a  + +d +l+vvd   e++  +    l + l e+ kp ++v+nk
  EPX71503.1 116 TAALRvTDGALVVVDTI-EGVCVQTeTVLRQALGERIKP-VVVVNK 159
                 6666647********54.434333303344444434444.666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (841 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       578  (0.0322383); expected 358.6 (0.02)
Passed bias filter:                      531  (0.0296168); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.71u 0.31s 00:00:01.02 Elapsed: 00:00:00.47
# Mc/sec: 5329.09
//
Query:       EPX71504.1  [L=1203]
Description: synaptotagmin family C2 domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-59  198.2   3.1    1.9e-18   66.6   0.1    4.5  4  C2        C2 domain
     0.0009   18.8   0.0        1.6    8.3   0.0    2.6  2  CEP76-C2  CEP76 C2 domain


Domain annotation for each model (and alignments):
>> C2  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.5   0.0   1.1e-17   9.5e-14       2      92 ..     432     521 ..     431     531 .. 0.89
   2 !   30.2   0.1   4.6e-11   4.1e-07       2     102 ..     568     665 ..     567     666 .. 0.84
   3 !   47.1   0.0   2.6e-16   2.3e-12       2      97 ..     701     795 ..     700     801 .. 0.90
   4 !   66.6   0.1   2.2e-22   1.9e-18       1      97 [.    1013    1109 ..    1013    1115 .. 0.93

  Alignments for each domain:
  == domain 1  score: 51.5 bits;  conditional E-value: 1.1e-17
                 EEEEEEEEEESSSSSSTTSSCEEEEEEEE.ECEEEEEE-SCSSSSSSEEEEEEEEEESCHTTSEEEEEEEEECSSSTEEEEEEEEEEGHHHH CS
          C2   2 klevtvieAknLpnkdkkgssdpyvkvsl.dgkqkakTrviknslnPvWnekftfevaeleeakLeveVfdndrlskddfiGkveiplstll 92 
                  +e++ ++++ L+  d+ gs+dpyv+++   gk+++ +++++n+++P++ne+f+  ++   ++ L + V+d++ l+kd++iG++ + ls l+
  EPX71504.1 432 AVEIHLKRCESLK-GDVLGSVDPYVVIKNsFGKKIGTSKTVQNTTSPTFNETFYAIINS-FSENLILDVYDFNDLRKDKLIGTAVVALSALE 521
                 5789999999995.5599*********997799999999*****9**********9999.***********9999***********999854 PP

  == domain 2  score: 30.2 bits;  conditional E-value: 4.6e-11
                 EEEEEEEEEESSSSSSTTSSCEEEEEEEEECEEEEEE-SCSSSSSSEEEEEEEEEESCHTTSEEEEEEEEECSSSTEEEEEEEEEEGHH.HHTTHHHHE CS
          C2   2 klevtvieAknLpnkdkkgssdpyvkvsldgkqkakTrviknslnPvWnekftfevaeleeakLeveVfdndrlskddfiGkveiplst.llsgeeaeg 99 
                 ++++t +++k+L  kd ++   +y+ + +++k+++ Tr ik++ nP W+e +   v++ e+ +L ++Vf +d+   ++  G+++++l++ ++ +++  +
  EPX71504.1 568 IVQFTAHQCKEL-SKDPSKRHTAYANLAINDKVMHTTRKIKKNNNPSWEEFCGTVVPKGEKGMLGIQVFTDDH---SHPFGTLNMSLQElVTATQKGLN 662
                 6788999*****.455788899****************7766669***9999999999************999...5568*********6666666667 PP

                 EEE CS
          C2 100 wyp 102
                 w++
  EPX71504.1 663 WFQ 665
                 775 PP

  == domain 3  score: 47.1 bits;  conditional E-value: 2.6e-16
                 EEEEEEEEEESSSSSSTTSSCEEEEEEEEECEEEEEE-SCSSSSSSEEEEEEEEEESCHTTSEEEEEEEEECSSSTEEEEEEEEEEGHHHHTTHHH CS
          C2   2 klevtvieAknLpnkdkkgssdpyvkvsldgkqkakTrviknslnPvWnekftfevaeleeakLeveVfdndrlskddfiGkveiplstllsgeea 97 
                  ++v++ +++ L+ k  ++++d+yv++   + + ++T vik+slnP W+e ++++v   ++++ +++V+ +++ ++d +iG ++ip+s++ +++e 
  EPX71504.1 701 VMRVHINSCNSLHSKLPGKKCDAYVRALSYSMEQGRTVVIKDSLNPSWDEYVYVPVMT-KHDTCQLQVMQFESHGDDTVIGSLSIPVSKFVQQSEN 795
                 5799********9998999*******9888****************************.**************77777***********6665554 PP

  == domain 4  score: 66.6 bits;  conditional E-value: 2.2e-22
                  TEEEEEEEEEESSSSSSTTSSCEEEEEEEEECEEEEEE-SCSSSSSSEEEEEEEEEESCHTTSEEEEEEEEECSSSTEEEEEEEEEEGHHHHTTHHH CS
          C2    1 gklevtvieAknLpnkdkkgssdpyvkvsldgkqkakTrviknslnPvWnekftfevaeleeakLeveVfdndrlskddfiGkveiplstllsgeea 97  
                  gk++v v++A+nL+  d +g+sdp+v  +l++++++ T+++k++lnPv+ne f++e++ ++++k   +Vfd+d  +++d +G++ i+l +l+++e  
  EPX71504.1 1013 GKMTVDVLNATNLASADSNGKSDPFVIFELQDEEVFTTKTVKKNLNPVFNEGFEVELPCKQTSKFIARVFDRDFGNQNDPLGNCVIDLIKLQQHEYT 1109
                  6789**********************************************************************99999********9997776654 PP

>> CEP76-C2  CEP76 C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0   0.00018       1.6      33      71 ..     449     487 ..     439     506 .. 0.88
   2 !    7.5   0.0   0.00031       2.7      45      78 ..    1043    1076 ..    1012    1138 .. 0.70

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00018
    CEP76-C2  33 gqvestlrlhlefrkqRfrskpvpctcePefneeFllel 71 
                 g+v+ ++++  +f+k+  +sk+v+ t  P+fne+F   +
  EPX71504.1 449 GSVDPYVVIKNSFGKKIGTSKTVQNTTSPTFNETFYAII 487
                 78899999***************************8766 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.00031
    CEP76-C2   45 frkqRfrskpvpctcePefneeFlleleteeesa 78  
                    ++ f++k+v+   +P fne+F +el+ +++s+
  EPX71504.1 1043 QDEEVFTTKTVKKNLNPVFNEGFEVELPCKQTSK 1076
                  456679**********************994432 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       535  (0.0298399); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.82u 0.27s 00:00:01.08 Elapsed: 00:00:00.46
# Mc/sec: 7861.08
//
Query:       EPX71505.1  [L=172]
Description: DNA-directed RNA polymerase complex II subunit Rpb7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.7e-17   62.4   0.0    5.7e-17   61.9   0.0    1.3  1  SHS2_Rpb7-N    SHS2 domain found in N terminus of Rpb7p/Rpc25
    3.7e-12   46.4   0.0    5.9e-12   45.7   0.0    1.3  1  S1             S1 RNA binding domain
  ------ inclusion threshold ------
       0.15   12.3   0.0       0.22   11.8   0.0    1.3  1  RNA_pol_Rbc25  RNA polymerase III subunit Rpc25


Domain annotation for each model (and alignments):
>> SHS2_Rpb7-N  SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.9   0.0   9.5e-21   5.7e-17       2      70 .]      10      80 ..       9      80 .. 0.96

  Alignments for each domain:
  == domain 1  score: 61.9 bits;  conditional E-value: 9.5e-21
                 EEEEE-GGGTTSTHHHHHHHHHHHHHTTBEETTTEEEEEEEEE..EEECCEEE-TTTSSEEEEEEEEEEEE CS
  SHS2_Rpb7-N  2 dtvrlePsylgstledallerllekyegkvvpslGvivavldi..aeysegkvlggsGsvyvrVtfralvF 70
                 +t+ l+Psy+g+ ++d+l+++ll ++eg+++ ++G+i++vld    ++++g+v++g+G + ++V++ra+ +
   EPX71505.1 10 LTITLHPSYFGPRMQDYLKAKLLADVEGTCSGQYGYIICVLDSntINIDKGRVVPGQGYAEFEVKYRAVLW 80
                 79****************************************977889********************987 PP

>> S1  S1 RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.7   0.0   9.9e-16   5.9e-12       2      70 ..      82     158 ..      81     161 .. 0.96

  Alignments for each domain:
  == domain 1  score: 45.7 bits;  conditional E-value: 9.9e-16
                 STTTCEEEEEEEEEETTEEEEEETTTEEEEEEGGGSSSS.........CEESCHHHCEETTEEEEEEEEEEETTTTEE CS
          S1   2 pekgevveGeVtsvtkgGafVelgngvegfvpaselsrd.........arvedpdevlkvGdevkvkvlkvdkdrrri 70 
                 p+ gevv+++Vt v+k+G+f ++g + ++fv+ ++++ d         + ++ +d+v+  G  v++k+ +++ d+ +i
  EPX71505.1  82 PFRGEVVDAVVTTVNKMGFFADIG-PLSVFVSSHLVPPDmrfdpaanpPNYSGEDQVIERGSNVRLKIVGTRTDATEI 158
                 899*********************.***********************999*********************999876 PP

>> RNA_pol_Rbc25  RNA polymerase III subunit Rpc25
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   3.7e-05      0.22       1      73 [.      82     150 ..      82     167 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.7e-05
                    -STTSEEEEEEEEEETTCEEEEBTTBSEEEEECCCCSTTEEEECCCTCEEEEESSSEEEEE-TTSEEEEEEEE CS
  RNA_pol_Rbc25   1 PfvgevltgkiksstregikvslgffddifvpkelLfepsefdeeeqawvweveeeeelyldvgeeirfrvee 73 
                    Pf+gev+ + ++  ++ g + ++g +  +fv  +l++  ++fd++ +   +     e+  ++ g ++r++++ 
     EPX71505.1  82 PFRGEVVDAVVTTVNKMGFFADIGPL-SVFVSSHLVPPDMRFDPAANPPNY---SGEDQVIERGSNVRLKIVG 150
                    9**********************987.599*************99886544...4577789999999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       248  (0.0138323); expected 358.6 (0.02)
Passed bias filter:                      239  (0.0133304); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.43
# Mc/sec: 1211.47
//
Query:       EPX71506.1  [L=1211]
Description: P-type ATPase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.7e-19   68.1   0.1    1.4e-18   67.1   0.1    1.6  1  E1-E2_ATPase   E1-E2 ATPase
    4.7e-17   63.0   0.0    9.3e-12   45.7   0.0    2.5  2  Hydrolase      haloacid dehalogenase-like hydrolase
     0.0004   20.4   0.3     0.0019   18.2   0.0    2.4  3  Cation_ATPase  Cation transport ATPase (P-type)
  ------ inclusion threshold ------
      0.017   14.6   0.1      0.034   13.7   0.1    1.4  1  S6PP           Sucrose-6F-phosphate phosphohydrolase
      0.021   14.5   0.2       0.16   11.7   0.1    2.3  2  Hydrolase_3    haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> E1-E2_ATPase  E1-E2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.1   0.1   3.9e-22   1.4e-18       6     180 ..     255     462 ..     250     463 .. 0.84

  Alignments for each domain:
  == domain 1  score: 67.1 bits;  conditional E-value: 3.9e-22
                   EEEEE-TTS-EEEEGGG--TTSEEEE...ETT-B--SEEEEEEE-SEEE-TTTS---S-EE-.................G-TTEE-TT-EEEE.... CS
  E1-E2_ATPase   6 takvirdgteeeidakelvpGDivll...kagdrvpaDgrivegsaevdesaLTGEslpvek.................ekgdmvfsGtvvvs.... 78 
                    ++v+r+++++++ +++l p+D+v +   k+    p+D+ +++g++ v+e++L GEs+p  k                 +k+  + +Gt v++    
    EPX71506.1 255 DVQVYRNKKWMTVSTEDLLPNDVVSIvhtKEDLGLPCDMLLISGTCVVNEAMLSGESTPLVKesielrpeeavvdfgdiDKNAILNGGTRVLQvtps 351
                   689*******************9876222455579*******************************************99***************** PP

                   .........-EEEEEEEE-TTTSTTTTTSTTS--------HHHHHHHHHHHHHHHHHHHHHHH..HHHS-STTTSSTTHHHHHHHHHHHHHS-TTHH CS
  E1-E2_ATPase  79 .........geakavVtatgedtelgkiarlveeakskktplqkkldklgkvlvpvvlliall..vflialllgkslaeallralallvaaiPcaLp 164
                            g + avV++tg +t  g ++r +  +++k +  +++l+kl  +l+++v++ia+   v+ +   + +s  + +l  + ++++++P  Lp
    EPX71506.1 352 pfskiktpdGGVPAVVLRTGFETSQGSLVRTMVFSSEKVS--ENNLEKLYFILFLMVFAIAASayVWHVGSQTDRSRYKLMLDCIMIITSVVPSELP 446
                   ********************************99866655..56666665555555555555400444444444444499999************** PP

                   HHHHHHHHHHHHHHHH CS
  E1-E2_ATPase 165 lavplalalgarrlak 180
                   + ++la+ +++++l+k
    EPX71506.1 447 MELSLAVNASLAALSK 462
                   *****99999988876 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.7   0.0   2.6e-15   9.3e-12       2     156 ..     480     723 ..     479     740 .. 0.76
   2 !   14.7   0.0   8.1e-06     0.029     170     208 ..     794     834 ..     775     836 .. 0.84

  Alignments for each domain:
  == domain 1  score: 45.7 bits;  conditional E-value: 2.6e-15
                 SEEEEESBTTTBCHHHHHHHHHHHH...............CHHHHHHHHHH.............HHCHHHHHH.HHHHHHHHHHHHHHHHETTTE.... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx...............xxxxxxxxxxx.............xxxxxxxxx.xxxxxxxxxxxxxxxxxxxxx.... RF
   Hydrolase   2 ktvvfDkdGTLttgepsvedvivsa...............alalaaaletg.............sehpigkal.vaaakarsgaltgfatfigrg.... 67 
                 + ++fDk+GTLt+ +++v  v   +               + +la a+++                   g  +  a  +a+             g    
  EPX71506.1 480 DICCFDKTGTLTEEHMVVQGVSGLNkeepsrletlnnvpkETELAIATAHTlvlleqegepaktV----GDPMeKATIEAL-------------Gwsvs 561
                 789************99999999997767777777766663333333333344556555533332....222222222222.............23333 PP

                 .................................................HHHHTHHHHHHHH..HCHHHHHHHHHHHHHHCHHHHHH............ CS
                 .................................................xxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxx............ RF
   Hydrolase  68 .................................................ayaigkpewltal..dippdlgaaigsaqsqgrtvall............ 103
                                                                  +  +g pe ++ +  ++p d+++   ++ ++g  v  l            
  EPX71506.1 562 knnvivppetsvfhkgkvqitrnfqfssalkrqssvsnvriaggnqrtfVSVKGAPEVIATMlkNVPRDYEKVYKEYGRKGSRVLALackhfknfvses 660
                 33333333445555556677777888899999999999999999999999999999999999************************************* PP

                 ............TTHHHHHHHHHHTHHBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTT CS
                 ............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 104 ............qaralavftiadplkvkpeaaeavasLkaagievvlltgdnpetaeraanqlG 156
                               +  + + +  p  +k++a+ +++ L+    + +++tgdnp ta  +a+q+G
  EPX71506.1 661 kvtdltreeiesGLDFAGFLIFNSP--LKDDAKATIQMLNNSSHRCIMITGDNPLTAVYVAEQVG 723
                 ******9999965577888888899..************************************** PP

  == domain 2  score: 14.7 bits;  conditional E-value: 8.1e-06
                 S..STTTSHHHHHHHHHHHTSTGGGEEEEESSHHHHHHHHH CS
                 x..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 170 t..vakpspegkvaaireLqgkpeevamVGDgvnDaaalaa 208
                 +   a +sp +k+  i  L+  +  ++m GDg nD+ al++
  EPX71506.1 794 AwvYARVSPAQKELMIATLKDCGYVTLMCGDGTNDVGALKQ 834
                 355799*************966777**************98 PP

>> Cation_ATPase  Cation transport ATPase (P-type)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   5.3e-07    0.0019      14      86 ..     538     622 ..     520     627 .. 0.75
   2 ?   -3.7   0.0       3.8   1.3e+04      45      66 ..     746     767 ..     730     772 .. 0.78
   3 ?   -3.6   0.0       3.5   1.3e+04      25      51 ..     838     864 ..     827     866 .. 0.73

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 5.3e-07
  Cation_ATPase  14 kdevkllGnktEsALlvlaekl.........gldteelreetkkvqeipFnssrKrmsvvlkle...pekkvrlyvKGApeiilk 86 
                     +  k++G++ E A +++              +    ++ + ++ + ++F+s  Kr+s+v + +    +++  + vKGApe+i  
     EPX71506.1 538 GEPAKTVGDPMEKATIEALGWSvsknnvivpPETSVFHKGKVQITRNFQFSSALKRQSSVSNVRiagGNQRTFVSVKGAPEVIAT 622
                    5556677777777766665544455555554333334556688899****************99*99999************975 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 3.8
  Cation_ATPase  45 etkkvqeipFnssrKrmsvvlk 66 
                    +t++  ++p + ++K  ++++k
     EPX71506.1 746 STDDTVTVPMDCTKKLDASLYK 767
                    4667778999999999999887 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 3.5
  Cation_ATPase  25 EsALlvlaeklgldteelreetkkvqe 51 
                     +ALl++ e+ +l+++e  + ++ + +
     EPX71506.1 838 GIALLNASEEDMLQMQERARMNNLMSV 864
                    579999999987777777776666655 PP

>> S6PP  Sucrose-6F-phosphate phosphohydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   9.3e-06     0.034     184     225 ..     819     860 ..     813     869 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 9.3e-06
                 EEEEE-SGGGHHHHTSSSEEEE-TT--HHHHHHHHHH--TTE CS
        S6PP 184 ilvcGdsgnDeellignvlgVvVgnaqeellqwllenakene 225
                 +l+cGd  nD   l+++  g+ + na+ee +  ++e a+ n+
  EPX71506.1 819 TLMCGDGTNDVGALKQSHVGIALLNASEEDMLQMQERARMNN 860
                 89***************************8888888888776 PP

>> Hydrolase_3  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.28     1e+03      17      55 ..     687     725 ..     682     735 .. 0.86
   2 ?   11.7   0.1   4.6e-05      0.16     206     234 ..     819     847 ..     811     866 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.28
                  -HHHHHHHHHHHHTTSEEEEE-SS-HHHHHHHHHHCCCC CS
  Hydrolase_3  17 sektkeaikklkekgikvviATGRslravlpvleelgld 55 
                  ++ +k++i+ l +  +  +  TG ++ ++ +v+e++g+ 
   EPX71506.1 687 KDDAKATIQMLNNSSHRCIMITGDNPLTAVYVAEQVGIV 725
                  6788999***************************99975 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 4.6e-05
                  EEEEESSGGGHHHHHHSSEEEEETTS-HH CS
  Hydrolase_3 206 viafGDgeNDieMLeaaglgvAmgnasee 234
                  ++  GDg ND+  L+++ +g+A+ nasee
   EPX71506.1 819 TLMCGDGTNDVGALKQSHVGIALLNASEE 847
                  5678***********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1211 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       770  (0.0429472); expected 358.6 (0.02)
Passed bias filter:                      514  (0.0286686); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.83u 0.30s 00:00:01.12 Elapsed: 00:00:00.48
# Mc/sec: 7590.00
//
Query:       EPX71507.1  [L=777]
Description: dipeptidyl peptidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   1.1e-100  336.8   5.7   1.7e-100  336.2   5.7    1.3  1  DPPIV_N        Dipeptidyl peptidase IV (DPP IV) N-terminal re
    7.8e-49  166.0   2.6    1.1e-48  165.5   2.0    1.5  2  Peptidase_S9   Prolyl oligopeptidase family
    6.8e-05   22.2   0.0    0.00033   20.0   0.0    2.0  2  DUF2920        Protein of unknown function (DUF2920)
     0.0011   18.6   0.2     0.0042   16.8   0.2    1.8  1  Esterase       Putative esterase
     0.0018   18.9   0.6     0.0094   16.6   0.0    2.3  3  Abhydrolase_6  Alpha/beta hydrolase family
     0.0024   17.5   0.0     0.0077   15.8   0.0    1.7  1  DLH            Dienelactone hydrolase family
     0.0087   14.6   0.0        2.4    6.6   0.0    2.2  2  PAF-AH_p_II    Platelet-activating factor acetylhydrolase, is
  ------ inclusion threshold ------
      0.016   15.1   0.2        5.4    6.9   0.0    2.5  2  BAAT_C         BAAT / Acyl-CoA thioester hydrolase C terminal
      0.018   14.9   0.3        3.9    7.2   0.3    2.3  2  Abhydrolase_2  Phospholipase/Carboxylesterase
       0.12   11.9   2.1        0.3   10.6   1.1    2.0  2  Peptidase_S15  X-Pro dipeptidyl-peptidase (S15 family)


Domain annotation for each model (and alignments):
>> DPPIV_N  Dipeptidyl peptidase IV (DPP IV) N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  336.2   5.7  9.5e-104  1.7e-100       1     354 []     117     485 ..     117     485 .. 0.98

  Alignments for each domain:
  == domain 1  score: 336.2 bits;  conditional E-value: 9.5e-104
                 TTTSSEEEEEECEEEESSSEETTEEEEEETTTEECEEEETT..TT.BSEEEEESSTTEEEEEETTEEEEESTTTSEEEECES-STTTEEESB--HHHHH CS
     DPPIV_N   1 spdgkflllatnaeknwRhsytaeyyiydletneveelspg..eeklqlakwSPagdklafvrnnnLyvrelatgkeiqlTsdgsagifnGvadWvyeE 97 
                 s+d +++ll  n++++wRhs+ta+yy++d+ ++ev++l p+  + +++la wSP+g++lafv++nnL+v  +++++ ++lT+dg++ +f+G++dW+yeE
  EPX71507.1 117 SADARYVLLNVNRTQRWRHSFTASYYLFDTLEKEVTPLVPQeeNLRISLAVWSPTGHQLAFVYENNLHVL-TENREILTLTTDGNENVFYGLSDWIYEE 214
                 789**************************************98899************************.5689************************ PP

                 HTSSSSBEEEE-TTSSEEEEEEEECTTS-EEEEEESSSSC-......SS-EEEEEE--BTTS---EEEEEEEECTTSCEEECS-HHHHCTTCEEEEEEE CS
     DPPIV_N  98 EvlgsnsavwWspdgsrlaylrfdeseVpeitlpsytdees......qypevksikYPkaGsknpkVelkvvdlasgktvevqlpdslsekdeyitrvk 190
                 Evl+s s +wWspd+++la+l+++es++p++++p yt+e++      +y+++ +ikYPkaG++np+V+l + dl + kt+ +  +++   ++ ++++v 
  EPX71507.1 215 EVLSSPSTIWWSPDARKLAFLKLNESATPIYQFPLYTSESDtssfefNYNKDIKIKYPKAGQPNPTVSLLFSDLGTDKTYPLHSWNNHVFEETVVQNVL 313
                 ***************************************99********************************************************** PP

                 ECTTSCCEEEEEEETTSTEEEEEEEETTTCCEEEEE.EEESSS-SSS-S-EEE-.......TTTSSEEEEEEETTSSEEEEEEESSS-C.EEESS-SSS CS
     DPPIV_N 191 WtsdeksllvqwlnRsqnrlkvvlvdaetgravvkl.eetsdgWvelhdevhfl.......krdesgflwisekdGfkHLylfdldgkseikqlTsGew 281
                 W++++   lvq++nR+++  k  l+d+et+r   +l e  +dgW+e+++ +++l       + + +gf++i++ ++++HL+ ++ +g+s ++ lTsG w
  EPX71507.1 314 WVNESA-TLVQFTNRNSTCKKTDLLDLETKRISSVLsECLTDGWFEVQQFAKTLpvnnpnyEVWTNGFFDIMPYQDYNHLAFVPFNGSS-PTFLTSGTW 410
                 ****99.**********************87777766***************9999****999**************************.********* PP

                 -EEE.EEEEETTTTEEEEEESSSETTEBEEEEEESSCTTEEEESSTTTSEE..EEEEE-TTSSEEEEEEESSSSSE CS
     DPPIV_N 282 eVts.ilavdekrdlvyFtatkdsPlerhlYsvslesggeltrltdeegdh..ysasfspsgkyyvlkysgpdtpp 354
                 +Vt+ +l++d+ r+++yF++t +++ erhlY+vsl+ + e+ ++td++ +   ys+ fspsg++yvl+y+gp +p+
  EPX71507.1 411 DVTEgPLSIDASRGHLYFIGTLKDSSERHLYYVSLD-NLEIHNITDDGVQDgyYSTNFSPSGNFYVLNYQGPRIPW 485
                 **999*******************************.*************9************************8 PP

>> Peptidase_S9  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.0       4.7   8.3e+03     128     154 ..     380     411 ..     369     412 .. 0.73
   2 !  165.5   2.0   6.2e-52   1.1e-48      12     209 ..     578     769 ..     566     772 .. 0.95

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 4.7
                   HHHHHHH-CGGG--.....---EEEEEEETT- CS
  Peptidase_S9 128 ykelspyspldnvk.....aypplLlihGlaD 154
                   + ++ py+++++++      + p++l+ G++D
    EPX71507.1 380 FFDIMPYQDYNHLAfvpfnGSSPTFLTSGTWD 411
                   55667777777777777888889999999988 PP

  == domain 2  score: 165.5 bits;  conditional E-value: 6.2e-52
                   CCT-EEEEE--TTSSTTHCHHHHTTSGGGGHHHHHHHHHHHHHHHHTTS--GGGEEEEEETHHHHHHHHHHHH-GGG-SEEEEESE---CCCHHCST CS
  Peptidase_S9  12 drGyvvvvanirGsggyGeafhdagkrklgqnefdDfiaaaealakegyvdserlaitGgSyGGyltgaalnqrpdlFkaavaevpvvdvlrydsdt 108
                   +  y+vv +++rG+g  G +f+++++++lg+ e+ D++ aae++a+  +v++e++ai+G+S+GGylt+ al+ ++++F++++a++pv+d+  yds  
    EPX71507.1 578 NFEYIVVTVDGRGTGFNGNDFRQSVYQNLGTLEAMDQVSAAEHWAQYPFVEQEKVAIWGWSFGGYLTLKALE-ASNVFSYGMAVAPVTDWHLYDSI- 672
                   568******************************************999************************.***********************. PP

                   TSTHHHCCCC--TTTCHHHHHHHHHH-CGGG-----EEEEEEETT-SSS-THHHHHHHHHHH--S-S.EEEEEETTS-SSTTSSHHHHHHHHHHHHH CS
  Peptidase_S9 109 dllteeymewgnpeeneegykelspyspldnvkaypplLlihGlaDdrvppaealklvaaLqkkgkn.vlllifpdegHgvgkprakveelarllaF 204
                     +te+ym+ +    ne+gy e s++++ + +k+++++L+ hG+ Dd+v++++ ++l+++L+ ++   +++ +fpd+ H+++ ++a+ + ++rl ++
    EPX71507.1 673 --YTERYMNLPIL--NENGY-ENSKVHNITILKEKKRFLIAHGTGDDNVHFQHVMHLMDQLNLANCYnYDMAVFPDSAHSISYHNASLAIYHRLSEW 764
                   ..*******9997..9999*.9****************************************777777***************************** PP

                   HHHHC CS
  Peptidase_S9 205 lkeal 209
                   +  a+
    EPX71507.1 765 ISMAF 769
                   98776 PP

>> DUF2920  Protein of unknown function (DUF2920)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.85   1.5e+03      80     110 ..     492     522 ..     488     539 .. 0.71
   2 !   20.0   0.0   1.8e-07   0.00033     151     195 ..     602     645 ..     599     651 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.85
     DUF2920  80 vgskysllaedlekiekllkdiklpydevkk 110
                 ++++++++ e+ e+++k+l+ ++lp  + +k
  EPX71507.1 492 QKDNFTVRIEENEHLHKILGSYNLPQIKYDK 522
                 456677778999********99997655444 PP

  == domain 2  score: 20.0 bits;  conditional E-value: 1.8e-07
     DUF2920 151 eYqnfGimaAlDiinalkdlvkrfpkeadlpviliGgsyGGYlal 195
                  Yqn G ++A+D + a+++   ++p+  ++ v + G s+GGYl+l
  EPX71507.1 602 VYQNLGTLEAMDQVSAAEHW-AQYPFVEQEKVAIWGWSFGGYLTL 645
                 5****************996.68*****99999*********975 PP

>> Esterase  Putative esterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.2   2.3e-06    0.0042      15     245 ..     537     756 ..     530     761 .. 0.70

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 2.3e-06
                 .CC.GGTTTEEEEEEE--T...THHCCHHHHHCHHCCCCHCCT.EEEEEECCCSS-TTTTTSBTTSBB.TTEEETTCCCCCCHCHHHHTHHHHHHHHHC CS
    Esterase  15 PedyspgrkypvvylldGl...tgwdqnfrakelleslaregeiaeviivvvprggessfysdwdlgarfyenategpgaeayetfltqeLlplldanf 110
                 P +++p+rkypv+++  G    +  ++ fr++  ++++ +++   e i+v+v+  g+  + +d+ +    y+   + +  ea ++  ++e   + +  f
  EPX71507.1 537 PTNFNPNRKYPVLFFAYGGpgsQQVSKLFRVD--FQTYLASHPNFEYIVVTVDGRGTGFNGNDFRQS--VYQ---NLGTLEAMDQVSAAE--HWAQYPF 626
                 88899999999999998874445555555554..555688888888999999999998445555544..232...233333333444444..6778888 PP

                 SEECCCEEEEEETHHHHHHHHHHHCSTTTCCEEEEES--S-CC...........HCHHHCTTCCHHHCC-CCCCHCHHCHTTSEEEEEEEECTTBCCCH CS
    Esterase 111 rtapdgravaGqSmGGlgALilalkhpdrFgsvssfSpivnps...........namWgqeekeawqendpvllakelsaslkalriyldvGtseddlg 198
                   +++  a++G S+GG+  L  al++ + F++ ++ +p+ +             n ++  +e++   en +v+++      ++++r ++  Gt++d   
  EPX71507.1 627 VEQEK-VAIWGWSFGGYLTLK-ALEASNVFSYGMAVAPVTDWHlydsiyterymNLPIL-NENGY--ENSKVHNI---TILKEKKRFLIAHGTGDD--- 714
                 77777.*************98.89*************9977668865555544444443.34443..88888888...568888999999999998... PP

                 TSCHHHHHHHHHHHCCHHHHCCCCCCTT-SCCCC.--SSHHHHHHHHH CS
    Esterase 199 eqlsveilevlarnrelkeqlaargvegedheyd.GghsweyWraqLi 245
                    +v ++ v+  + +l     a+  ++++ +++ + hs +y +a+L+
  EPX71507.1 715 ---NVHFQHVMHLMDQLN---LANCYNYDMAVFPdSAHSISYHNASLA 756
                 ...555666666666666...446777888888888888888888876 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0       1.2   2.2e+03     157     214 ..     124     182 ..      56     188 .. 0.61
   2 !   16.6   0.0   5.2e-06    0.0094      20      95 ..     570     662 ..     548     694 .. 0.65
   3 ?   -2.4   0.1       3.3   5.9e+03       2      34 ..     706     738 ..     704     756 .. 0.60

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 1.2
                    HHCHTTCCHHTT-TTGCEEE.CTT-CHHHHCHHCCCHSTTEEETCE...SSS...-HHHHSH CS
  Abhydrolase_6 157 glgllpaaawadlpvpllvl.ggeDplvprllerllaqagarlpvvlpgaGH...lphleep 214
                     l  ++ ++w++  ++ + l  + ++ v +l+ +     +  l  v+  +GH   ++++ ++
     EPX71507.1 124 LLNVNRTQRWRHSFTASYYLfDTLEKEVTPLVPQEEN-LRISL-AVWSPTGHqlaFVYE-NN 182
                    3336678888888888865546777777777777777.77888.899999998766665.55 PP

  == domain 2  score: 16.6 bits;  conditional E-value: 5.2e-06
                    HHHHCCT....CEEEEE--TTST..S-GGCS--HHHCHHHHHHHCCTT............TTSEEEEEETCHHHHHHHHHHCC..EE..EEES- CS
  Abhydrolase_6  20 aallaag....vhvlapDlpGhG..rsdpppldledladlaalldelaa..........gggpvvlvGHSlGGalalaaaplalvvg..vlldp 95 
                    + +la++    + v+++D +G+G  ++d +   +++l + +++ d + a             +v ++G+S+GG+l l a+ +  v++   +++p
     EPX71507.1 570 QTYLASHpnfeYIVVTVDGRGTGfnGNDFRQSVYQNLGT-LEAMDQVSAaehwaqypfvEQEKVAIWGWSFGGYLTLKALEASNVFSygMAVAP 662
                    444455557776779*******75535666666666311.222222222222343444555569*************97777744544577777 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 3.3
                    EEE--GC.....GC.HHHH.HHHHCCTCEEEEE-- CS
  Abhydrolase_6   2 lllHGagssassWl.vapL.aallaagvhvlapDl 34 
                    l +HG+g +  +++ v++L   l  a +  + +D 
     EPX71507.1 706 LIAHGTGDDNVHFQhVMHLmDQLNLANC--YNYDM 738
                    6678888777777436666344444445..66664 PP

>> DLH  Dienelactone hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   4.3e-06    0.0077      65     189 ..     602     748 ..     588     763 .. 0.74

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 4.3e-06
         DLH  65 aldelvskvaeekvlddlkaavaylksvpevstkkvgvvGfCmGGalalllaaevpevdaavafYG...............................ls 132
                 ++++l++ +     +d++  a +++++ p v+++kv++ G+ +GG l+l+     +     v  YG                                +
  EPX71507.1 602 VYQNLGTLE----AMDQV-SAAEHWAQYPFVEQEKVAIWGWSFGGYLTLKALEASN-----VFSYGmavapvtdwhlydsiyterymnlpilnengyEN 690
                 444444444....55555.44557777777*****************998665554.....33344444446677779**************9987655 PP

         DLH 133 pekeleeaakikapilalfgeeDefipadevekleealk.aanvdlelkvYpgagHaF 189
                  + + + + k k+  l+ +g+ D  + +++v +l  +l  a+  ++++ v+p+ +H+ 
  EPX71507.1 691 SKVHNITILKEKKRFLIAHGTGDDNVHFQHVMHLMDQLNlANCYNYDMAVFPDSAHSI 748
                 5666667778899999999**999999999766666665166789***********85 PP

>> PAF-AH_p_II  Platelet-activating factor acetylhydrolase, isoform II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.7   0.0    0.0024       4.4      65     116 ..     509     562 ..     489     592 .. 0.70
   2 !    6.6   0.0    0.0014       2.4     225     291 ..     627     696 ..     614     734 .. 0.70

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0024
                  HHTS-HHHHHHH.HHHHTT-EEEEEET-..-B--SS-EEEEEEE--TT--TTTT CS
  PAF-AH_p_II  65 vlkasrlllnllfkllvgslrlpvkkne..llktkekyPlivFsHGLgafRtlY 116
                  +l+ ++l      kl+v +++lp ++ +  +++++ kyP++ F+ G  ++ ++ 
   EPX71507.1 509 ILGSYNLPQIKYDKLIVNNTTLPYMERKptNFNPNRKYPVLFFAYGGPGSQQVS 562
                  55555555555567889999999876651169999***********99888764 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0014
                  EEEEEEEEEEETHHHHHHHHHHHH-TTS-EEEEES-...--TTS-GGGGGG--S-EEEEEETTT--HHHH CS
  PAF-AH_p_II 225 ldtskvaviGHsFGgAtvikslsedteFrcaialDa...WmlPveeevyskvrqPllfinsekfqtaedi 291
                  ++++kva+ G sFGg  ++k+l     F  ++a  +   W l  +  +   ++ P+l  n ++  ++++i
   EPX71507.1 627 VEQEKVAIWGWSFGGYLTLKALEASNVFSYGMAVAPvtdWHLYDSIYTERYMNLPILNENGYENSKVHNI 696
                  67899********************999998876431114333222333345555555555444444444 PP

>> BAAT_C  BAAT / Acyl-CoA thioester hydrolase C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.0     0.003       5.4      13      37 ..     621     645 ..     615     652 .. 0.86
   2 ?    5.4   0.3    0.0087        16      93     165 ..     680     750 ..     650     768 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.003
                 HHCSTTB--SSEEEEEETHHHHHHH CS
      BAAT_C  13 llrhpkvkkdkigllGiSkGgelal 37 
                   + p+v+++k+++ G S+Gg l+l
  EPX71507.1 621 WAQYPFVEQEKVAIWGWSFGGYLTL 645
                 56789****************9987 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.0087
                 TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT--.--EEEEETTB-S---S CS
      BAAT_C  93 vdvlallkeklaekalipvekakgpillvvgedDknwpSkesaekaserLkkagkkvevqlltYpkaGHliep 165
                   +l++   ++++   i + k k  +l++ g+ D n+  +++   ++++L+ a+   ++ +  +p++ H i  
  EPX71507.1 680 LPILNENGYENSKVHNITILKEKKRFLIAHGTGDDNVHFQHVM-HLMDQLNLANCY-NYDMAVFPDSAHSISY 750
                 5555555566677778999999****************99888.899999988877.9***********9974 PP

>> Abhydrolase_2  Phospholipase/Carboxylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.1    0.0025       4.5      95     199 ..     619     723 ..     577     723 .. 0.66
   2 ?    7.2   0.3    0.0022       3.9     159     205 ..     705     752 ..     683     765 .. 0.75

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0025
                    HHHHHTT.--GGGEEEEEETHHHHHHHHHHHT-SS.--SEEEEES---TTGGGTTTTS-GGGGG-EEEEEEETT.-SSS-HHHHHHHHHHHHTTS- CS
  Abhydrolase_2  95 daelkkg.ipssriiigGFSqGaalalylaltlpk.klggivafsgalplsqklessatavtkklpilqiHgee.Dpvvplalgkaakevlkkllk 187
                    +++ +++ +++++++i G S G+ l+l++  +++   +g +va      l  ++         +lpil   g+e ++v ++ + k+ k +l++  +
     EPX71507.1 619 EHWAQYPfVEQEKVAIWGWSFGGYLTLKALEASNVfSYGMAVAPVTDWHLYDSIYT-ERY--MNLPILNENGYEnSKVHNITILKEKKRFLIAHGT 711
                    4555666799*****************99877765556655554443333333332.122..3467777777652455567777777777777777 PP

                    GEEEEEETT--S CS
  Abhydrolase_2 188 kvelksyeglaH 199
                     ++ + ++ ++H
     EPX71507.1 712 GDDNVHFQHVMH 723
                    555555555555 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0022
                    EEEEEETT-SSS-HHHHHHH.HHHHHTTS-GEEEEEETT--SS--HHH CS
  Abhydrolase_2 159 ilqiHgeeDpvvplalgkaa.kevlkkllkkvelksyeglaHsideee 205
                     l  Hg+ D  v +++   +  ++  +++ ++++ +++++aHsi+++ 
     EPX71507.1 705 FLIAHGTGDDNVHFQHVMHLmDQLNLANCYNYDMAVFPDSAHSISYHN 752
                    4567***999999998665505555666669*************9865 PP

>> Peptidase_S15  X-Pro dipeptidyl-peptidase (S15 family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   1.1   0.00017       0.3      58     144 ..     581     673 ..     580     688 .. 0.72
   2 ?   -1.5   0.0      0.82   1.5e+03     228     253 ..     702     728 ..     685     733 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00017
                    -EEEEEE-TTSTTS-S---TT.....TTTHHHHHH.HHHHHHHHCTTEEEEEEEEEECHHHHHHHHHCTT--TTEEEEEEECE-S-T..CCCCSE CS
  Peptidase_S15  58 YavVvqdvrGtggSeGeftvg.....dsdeaedga.dvidWlakqpwsnGkVgmtGiSYlGttqllaaatgvpalkaivpeaaisdl..yddyyr 144
                    Y+vV +d+rGtg    +f        ++ ea d + ++ +W++     + kV+ +G S++G++ l a++ ++      +++a+++d+  yd +++
     EPX71507.1 581 YIVVTVDGRGTGFNGNDFRQSvyqnlGTLEAMDQVsAAEHWAQYPFVEQEKVAIWGWSFGGYLTLKALE-ASNVFSYGMAVAPVTDWhlYD-SIY 673
                    9**********99988888776888855566665505556888889999**************998877.555555555555555541155.444 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.82
                    -S-EEEEEECCSSTTC.CHHHHHHHHH CS
  Peptidase_S15 228 kapvllvgGwnDwnvk.ngaiklyeal 253
                    k   l+++G  D+nv  +++++l ++l
     EPX71507.1 702 KKRFLIAHGTGDDNVHfQHVMHLMDQL 728
                    567899***************998877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (777 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       533  (0.0297284); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.69u 0.27s 00:00:00.96 Elapsed: 00:00:00.44
# Mc/sec: 5295.04
//
Query:       EPX71508.1  [L=347]
Description: hypothetical protein SOCG_01725 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.1e-11   42.7   0.0    9.3e-11   41.8   0.0    1.4  1  Methyltransf_23  Methyltransferase domain
    5.4e-06   27.0   0.0    4.5e-05   24.1   0.0    2.2  2  Methyltransf_25  Methyltransferase domain
    2.9e-05   23.9   0.0    0.00035   20.4   0.0    2.1  2  Methyltransf_31  Methyltransferase domain
      3e-05   24.7   0.0    0.00019   22.1   0.0    2.1  1  Methyltransf_12  Methyltransferase domain
    8.5e-05   23.0   0.0    0.00021   21.8   0.0    1.7  1  Rhodanese        Rhodanese-like domain
    0.00026   21.6   0.0     0.0054   17.3   0.0    2.3  1  Methyltransf_11  Methyltransferase domain
      0.001   18.8   0.0     0.0023   17.6   0.0    1.5  2  TPMT             Thiopurine S-methyltransferase (TPMT)
     0.0022   17.6   0.0     0.0041   16.7   0.0    1.4  1  MTS              Methyltransferase small domain
     0.0037   16.7   0.0      0.007   15.8   0.0    1.4  1  TehB             Tellurite resistance protein TehB
  ------ inclusion threshold ------
      0.024   14.2   0.0      0.044   13.4   0.0    1.4  1  MetW             Methionine biosynthesis protein MetW
      0.029   14.4   0.0      0.043   13.8   0.0    1.3  1  Methyltransf_32  Methyltransferase domain
       0.14   12.1   0.0       0.23   11.4   0.0    1.3  1  Methyltransf_18  Methyltransferase domain


Domain annotation for each model (and alignments):
>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.8   0.0   6.2e-14   9.3e-11      10     125 ..     131     298 ..     121     325 .. 0.78

  Alignments for each domain:
  == domain 1  score: 41.8 bits;  conditional E-value: 6.2e-14
  Methyltransf_23  10 sdklerllpk.lraggrvLdiGcGtGillevl....rengfsvtgvDlspeaveiae..................................... 61 
                      ++++  + ++ +++ +rvLd+GcG+G+ l  l    ++ +++vt+vD+  +a+ + +                                     
       EPX71508.1 131 KENISMIEGNlRKSEARVLDVGCGSGRDLAWLcsreSKIRYKVTAVDAEKRAIYRFSslfetlgledhiehkqiakmdsvgkwkcynmegkrdi 224
                      6677777777578999**********999999975555588*******988888888****999999999999999999997777777777666 PP

  Methyltransf_23  62 .......kakkaqkdqfdeqeaaepqgkfdlIvlrevlehvpdppellrqiatllkpgGylllseplasl........k 125
                             ++   +++     +  ++++k+dl+v++ +l+++     ll+q  +ll ++G l+l+++ ++          
       EPX71508.1 225 nipdlstSDLMKFFETSSTTKPGKQDEKYDLVVQIRFLHRL-----LLTQTDQLLCDDGFLFLCTFVNDGihdyeypkG 298
                      666666444444444444445555778***********988.....89*****************98776666665551 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.0     3e-08   4.5e-05       1      53 [.     148     202 ..     148     213 .. 0.82
   2 ?   -0.1   0.0         1   1.5e+03      56      76 ..     244     264 ..     231     275 .. 0.66

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 3e-08
                      EEEET-TTSHHHHHHHCTS.T.SSEEEEEESSHHHHHHHHHHHHHTTTTEEEEES CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrl.g.kakvtgvDiseemleaareraeeeglnvefvqg 53 
                      vLd+GcG+Gr++++l  r  + ++kvt+vD  ++++ +  + +e  gl+ +++++
       EPX71508.1 148 VLDVGCGSGRDLAWLCSREsKiRYKVTAVDAEKRAIYRFSSLFETLGLEDHIEHK 202
                      9**************99964479*************9999999887775444444 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 1
                      CGBSSSTTTEEEEEEESTGGG CS
  Methyltransf_25  56 edlpfedgsfDlvvssgalhh 76 
                      ++   +d+++Dlvv +  lh 
       EPX71508.1 244 TKPGKQDEKYDLVVQIRFLHR 264
                      33447899*****99644664 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0   2.3e-07   0.00035       2      54 ..     143     196 ..     142     217 .. 0.83
   2 ?    1.2   0.0      0.19   2.8e+02      57      86 ..     236     264 ..     228     317 .. 0.75

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 2.3e-07
  Methyltransf_31   2 dkglrvlDlGCGtGeltfelae.elgpkaevvGiDiseeaielArenaqklgld 54 
                      +++ rvlD+GCG+G+++  l + e   + +v+ +D +++ai +  +  + lgl+
       EPX71508.1 143 KSEARVLDVGCGSGRDLAWLCSrESKIRYKVTAVDAEKRAIYRFSSLFETLGLE 196
                      67899****************954444888***********9999999999987 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.19
  Methyltransf_31  57 eFeqgdieeleklledekfDlilsnevlna 86 
                      +F + + ++++   +dek+Dl++   +l+ 
       EPX71508.1 236 KFFETSSTTKPG-KQDEKYDLVVQIRFLHR 264
                      555555555554.589*****999887743 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0   1.3e-07   0.00019       1      97 [.     149     278 ..     149     280 .. 0.85

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 1.3e-07
  Methyltransf_12   1 LeiGcGtGsllrallekl..pdieytgvDispsaiedakeklakrennnnnnvelealdlldldgg............................ 64 
                      L++GcG+G+ l+ l+ +   ++ ++t+vD  ++ai   +    ++     +++e +++   d+ g+                            
       EPX71508.1 149 LDVGCGSGRDLAWLCSREskIRYKVTAVDAEKRAI--YRFSSLFETLGLEDHIEHKQIAKMDSVGKwkcynmegkrdinipdlstsdlmkffet 240
                      8**************9998999999**********..5555555555556678888777777777799************************** PP

  Methyltransf_12  65 ..........ssfDlvvasnvlhhlkdirevldnirklLkpgG 97 
                                +++Dlvv + +lh l     +l +  +lL ++G
       EPX71508.1 241 ssttkpgkqdEKYDLVVQIRFLHRL-----LLTQTDQLLCDDG 278
                      ***********************98.....5666666666655 PP

>> Rhodanese  Rhodanese-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.0   1.4e-07   0.00021       9      46 ..      19      56 ..      12      79 .. 0.74

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 1.4e-07
   Rhodanese  9 lekgkvallDvRppeeYekghIpgAvnvskdtlsrakk 46
                ++ g+ + lDvRpp e++k h+ g+vn++++t+ + ++
  EPX71508.1 19 IAHGRLKCLDVRPPKEFQKRHLYGSVNIPSTTIAGRWF 56
                45566779********************6555555444 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   3.6e-06    0.0054       1      43 [.     149     195 ..     149     281 .. 0.77

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 3.6e-06
                      EEET-TTSHHHHHHH.HTT....SEEEEEES-HHHHHHHHHHCCHHT- CS
  Methyltransf_11   1 LdvGcGtGrlaeala.krg....arvvgvDlskemlklakekaseegl 43 
                      LdvGcG+Gr +++l  +      ++v++vD  k+++ + ++  ++ gl
       EPX71508.1 149 LDVGCGSGRDLAWLCsR-EskirYKVTAVDAEKRAIYRFSSLFETLGL 195
                      8**************62.33568************9877766666655 PP

>> TPMT  Thiopurine S-methyltransferase (TPMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   1.5e-06    0.0023      35      93 ..     142     207 ..     124     219 .. 0.78
   2 ?   -3.3   0.0       3.9   5.8e+03      66      83 ..     228     245 ..     227     281 .. 0.66

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 1.5e-06
                 -S--EEEEEET-TT-HHHHHH-BTT....EEEEEE-S-HHHHHHH...HHHHTTSGGGGGEEEE-- CS
        TPMT  35 akaglrvlvPlCGkaldlvwlAeqg....revvGvelselAvekf...feeanlepkvkelsgvke 93 
                  k+++rvl  +CG++ dl+wl +++    ++v +v+  + A+ +f   fe+ +le+++++ + +k 
  EPX71508.1 142 RKSEARVLDVGCGSGRDLAWLCSREskirYKVTAVDAEKRAIYRFsslFETLGLEDHIEHKQIAKM 207
                 56789*******************933334699*********876444777788888888777766 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 3.9
                 -S-HHHHHHHHHHHTTSG CS
        TPMT  66 elselAvekffeeanlep 83 
                 +ls + + kffe+   + 
  EPX71508.1 228 DLSTSDLMKFFETSSTTK 245
                 567777777777666532 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   2.7e-06    0.0041      27      84 ..     141     199 ..     133     213 .. 0.73

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 2.7e-06
                 CHCCTCSEEEEET-TTSHHHHHHHHHTTC.E..EEEEESBHHHHHHHHHHHHHTTGCEEE CS
         MTS  27 lpkelsgkvlDlGcGaGvlgaalakespeae..vtlvdvdarAlesakenleanklevev 84 
                 l k  + +vlD+GcG G   a+l +++++++  vt+vd+++rA+      +e+ +le ++
  EPX71508.1 141 LRK-SEARVLDVGCGSGRDLAWLCSRESKIRykVTAVDAEKRAIYRFSSLFETLGLEDHI 199
                 555.5668*********8666666666665546**********98777666666666544 PP

>> TehB  Tellurite resistance protein TehB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   4.7e-06     0.007      31      75 ..     145     193 ..     132     210 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 4.7e-06
                 S-EEEEES-TTSHHHHHH....HHTT-EEEEEES-HHHHHHHHHHHHHT CS
        TehB  31 pgkvldlgcgqgrnslyl....sllgydvtawdknensiafleeikeke 75 
                  ++vld+gcg+gr+  +l    s + y+vta+d ++ +i  + ++ e  
  EPX71508.1 145 EARVLDVGCGSGRDLAWLcsreSKIRYKVTAVDAEKRAIYRFSSLFETL 193
                 579************99944434578**********9998877766655 PP

>> MetW  Methionine biosynthesis protein MetW
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   2.9e-05     0.044       9      33 ..     140     164 ..     132     185 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 2.9e-05
        MetW   9 elikpgsrvldlGcGdGellellke 33 
                 +l k+++rvld+GcG G  l +l  
  EPX71508.1 140 NLRKSEARVLDVGCGSGRDLAWLCS 164
                 5567899*************99965 PP

>> Methyltransf_32  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   2.9e-05     0.043      23      91 ..     142     208 ..     129     258 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 2.9e-05
  Methyltransf_32  23 esgaltvvDvGaGkgYLsfvlalkekeyklkvvgidakeelvekaekraeklgkkfnkrlsfaelsiee 91 
                      ++++ +v+DvG+G g     l ++e++ ++kv+++da+++ + + + + e lg  ++++++ ++    +
       EPX71508.1 142 RKSEARVLDVGCGSGRDLAWLCSRESKIRYKVTAVDAEKRAIYRFSSLFETLG--LEDHIEHKQIAKMD 208
                      456899*********7555555558889****************999999999..88888777765544 PP

>> Methyltransf_18  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00016      0.23      11      70 ..     140     202 ..     127     215 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00016
  Methyltransf_18  11 lvekgs.rvaDiGtDHgylpiylv..kegkakkviasDinegplekakeniekagledkievr 70 
                       ++k++ rv+D+G+  g   ++l+  ++++  kv+a+D ++ ++ +  +  e+ gled+ie  
       EPX71508.1 140 NLRKSEaRVLDVGCGSGRDLAWLCsrESKIRYKVTAVDAEKRAIYRFSSLFETLGLEDHIEHK 202
                      4444444**********9888887334566779*************************99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (347 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       357  (0.0199119); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.50u 0.29s 00:00:00.79 Elapsed: 00:00:00.45
# Mc/sec: 2301.87
//
Query:       EPX71509.1  [L=334]
Description: hydroxyacid dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.5e-58  196.4   0.0      4e-58  195.7   0.0    1.3  1  2-Hacid_dh_C   D-isomer specific 2-hydroxyacid dehydrogenase,
    8.5e-20   70.8   0.0    9.7e-20   70.6   0.0    1.0  1  2-Hacid_dh     D-isomer specific 2-hydroxyacid dehydrogenase,
    0.00055   20.1   0.0     0.0073   16.5   0.0    2.1  2  NAD_binding_2  NAD binding domain of 6-phosphogluconate dehyd
     0.0026   17.4   0.0     0.0044   16.6   0.0    1.3  1  IlvN           Acetohydroxy acid isomeroreductase, NADPH-bind
  ------ inclusion threshold ------
      0.065   13.8   0.0       0.11   13.0   0.0    1.4  1  F420_oxidored  NADP oxidoreductase coenzyme F420-dependent


Domain annotation for each model (and alignments):
>> 2-Hacid_dh_C  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  195.7   0.0   1.1e-61     4e-58       2     178 .]     124     297 ..     123     297 .. 0.97

  Alignments for each domain:
  == domain 1  score: 195.7 bits;  conditional E-value: 1.1e-61
                   HHHHHHHTTHHHHHHHHHTTCCHTTCCGSBS-GTTSEEEEES-SHHHHHHHHHHHHTT-EEEEESSSHHHHHCHHHHTCEECSHHHHHHH-SEEEE- CS
  2-Hacid_dh_C   2 alllallrrlaeadeevregewksekallgkelsgktvGiiGlGrIGqavakrlkafgmkviaydrskkkeeeeeelgvelvsleellaesDivslh 98 
                    l+l + rr++++  ++re++w+++ +l++++ +gkt+Gi+G+G IG++vakr++af+m++i+++r++ +e+  ++ g+++v+++ella+sD++ l 
    EPX71509.1 124 FLMLGAFRRFNQGLFSLREKRWRNDCRLPSHDPEGKTLGILGMGGIGRTVAKRARAFDMNIIYHNRHQLDEK--DAGGAKYVQFDELLAQSDVLYLS 218
                   69*****************************************************************88555..88899****************** PP

                   S--STTTTTSBSHHHHHCSTTTEEEEESS-GGGB-HHHHHHHHHTTSCCEEEES--SSSSSGTCHHHHHSTTEEE-SS-T CS
  2-Hacid_dh_C  99 lpltpetrhlinaeelakmkkgailiNtaRGglvdeeaLleaLksgkiagaalDvfeeeplpedspllelpnviltPHia 178
                   lpl+++t+h+i++ee++kmk+g i++NtaRG+++de+aL+e Lk+g +  a+lDv+e+ep  +   l+e pnvil PH++
    EPX71509.1 219 LPLNKHTHHIIGKEEFKKMKRGIIIVNTARGPVMDEDALVEGLKEGIVYSAGLDVYEHEPQVHP-GLMENPNVILLPHLG 297
                   **************************************************************77.9************97 PP

>> 2-Hacid_dh  D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.6   0.0   2.7e-23   9.7e-20       7     133 ..      16     328 ..      10     329 .. 0.93

  Alignments for each domain:
  == domain 1  score: 70.6 bits;  conditional E-value: 2.7e-23
                 ...CHHHHHHHHHTTEEEEEES.CSSHH...HCHHHHTTESEEEE-TTS.....-BSHHHHHHH.TT--EEEESSSSCTTB-HHHHHHTT-EEEE-TTT CS
                 x..xxxxxxxxxxxxxxxxxxx.xxxxx...xxxxxxxxxxxxxxxxxx.....xxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  2-Hacid_dh   7 l..reeelellkeegvevevkd.ellte...ellekakdadalivrsnt.....kvtaevleal.pkLkviaragvGvDnvDldaakerGilVtnvpgy 93 
                 l   +ee + l e + +++v   e+ +e   +++ +++d++++i + +t      +++ev+e+l +++k+i+++g+G+++vD+da+++rGi V+n+p +
  EPX71509.1  16 LrhAPEEWKALGE-HANLKVFCdESREEffrKCKTEFQDVKGIIRTFETkffmgIFDEEVIEHLpSSVKFICHVGAGYETVDVDACTKRGIRVANCPVA 113
                 4447888888888.4466666624444455577888888**********8888889********99********************************* PP

                 THHHHHHHH.......................................................................................... CS
                 xxxxxxxxx.......................................................................................... RF
  2-Hacid_dh  94 stesvAElt.......................................................................................... 102
                   +++A++                                                                                           
  EPX71509.1 114 VDDATADTGiflmlgafrrfnqglfslrekrwrndcrlpshdpegktlgilgmggigrtvakrarafdmniiyhnrhqldekdaggakyvqfdellaqs 212
                 *************************************************************************************************** PP

                 .....................................................................................T-BHHHHHHHHHHH CS
                 .....................................................................................xxxxxxxxxxxxxx RF
  2-Hacid_dh 103 .....................................................................................aaTeeaqeniaeea 116
                                                                                                       ++ e+q+++ +  
  EPX71509.1 213 dvlylslplnkhthhiigkeefkkmkrgiiivntargpvmdedalveglkegivysagldvyehepqvhpglmenpnvillphlgTNSLETQHKMEAFS 311
                 *************************************************************************************************** PP

                 HHHHHHHHTTCCGTTBC CS
                 xxxxxxxxxxxxxxxxx RF
  2-Hacid_dh 117 aenlvaflkgespanav 133
                 +enl++ + ++++ ++v
  EPX71509.1 312 LENLKSGVLNDKLISPV 328
                 *****999888887776 PP

>> NAD_binding_2  NAD binding domain of 6-phosphogluconate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0     0.093   3.3e+02     102     134 ..      98     129 ..      72     135 .. 0.89
   2 !   16.5   0.0     2e-06    0.0073       2     101 ..     161     258 ..     160     270 .. 0.82

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.093
                    HHHHHTT-EEEEEEEESHHHHHHHT-EEEEEEE CS
  NAD_binding_2 102 kelkekglkfldaPVSGGeegAekGtLsimvGG 134
                    ++++++g+++ ++PV   ++ A +G   +m+G+
     EPX71509.1  98 DACTKRGIRVANCPVAVDDATADTGI-FLMLGA 129
                    568899*******************9.899886 PP

  == domain 2  score: 16.5 bits;  conditional E-value: 2e-06
                    EEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTTEEE-SSHHHHHHHCSEEEE-SSSHHHHHHHHHS.HCCC--TT-EEEE-S---HHH CS
  NAD_binding_2   2 igfiGlGvMGsnmalnllkagykvavynrtkekveelvaegakaaesieelvasldvvitmvkagkavdevieg.llealkkgdilidgstssped 96 
                    +g++G+G +G+  a++  + +++++ +nr++  ++e  a gak + +  el+a+ dv  + ++ +k++ ++i +  ++++k+g i+++++   + d
     EPX71509.1 161 LGILGMGGIGRTVAKRARAFDMNIIYHNRHQ--LDEKDAGGAK-YVQFDELLAQSDVLYLSLPLNKHTHHIIGKeEFKKMKRGIIIVNTARGPVMD 253
                    79**************************995..5554445554.45677899999*****************998999******999887666655 PP

                    HHHHH CS
  NAD_binding_2  97 trela 101
                       l 
     EPX71509.1 254 EDALV 258
                    55555 PP

>> IlvN  Acetohydroxy acid isomeroreductase, NADPH-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.2e-06    0.0044       4      91 ..     158     243 ..     156     253 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.2e-06
                 TS-EEEES-SHHHHHHHHHHHHTT--EEEEE-TT-HHHHHHHHTT-EEEEHHHHHHT-SEEEE-S-.HHHHHHHHHHHTGGG--TT-EE CS
        IlvN   4 gkkiaviGyGsqGhaqalnlrdsgldvvvglregsksvkkAkeegfevltvaeavkkadvvmiliP.Delqkevyeeeiepnlkegkal 91 
                 gk++ ++G+G  G++ a+  r   +++++ +r++    ++  + g + ++ +e+ +++dv+ + +P +++ ++++ +e  +++k+g ++
  EPX71509.1 158 GKTLGILGMGGIGRTVAKRARAFDMNIIYHNRHQL---DEKDAGGAKYVQFDELLAQSDVLYLSLPlNKHTHHIIGKEEFKKMKRGIII 243
                 89**************************9888776...67778899********************44455677777777777777655 PP

>> F420_oxidored  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   3.2e-05      0.11       2      76 ..     161     226 ..     160     249 .. 0.67

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 3.2e-05
                    EEEETTSHHHHHHHHHHHHTTS-GGCEEEEEESSCCCHHHHHHHHC-EEECECHHHHHHH-SEEEE-S-HHHHHH CS
  F420_oxidored   2 igiiGaGnmgealasgllaagaqpheivvansrnpekaeelaeelgvkvtavdneeaaeeadvvvlavkpedvee 76 
                    +gi+G+G +g+++a+++ a +    +i+     n ++++e  ++   +++ v+  e+++++dv+ l+++ ++++ 
     EPX71509.1 161 LGILGMGGIGRTVAKRARAFD---MNIIYH---NRHQLDEK-DAG--GAKYVQFDELLAQSDVLYLSLPLNKHTH 226
                    89*******************...999944...33333332.333..4455558888889999999999987654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (334 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2455.73
//
Query:       EPX71510.1  [L=190]
Description: M-phase phosphoprotein 6 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.2e-14   53.2  11.2    4.2e-14   53.2  11.2    2.1  2  MPP6      M-phase phosphoprotein 6
  ------ inclusion threshold ------
      0.019   13.6  20.5      0.021   13.4  20.5    1.0  1  Utp14     Utp14 protein


Domain annotation for each model (and alignments):
>> MPP6  M-phase phosphoprotein 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.2  11.2   4.7e-18   4.2e-14       3     130 ..       1     148 [.       1     155 [. 0.68
   2 ?   -2.9   9.2         1     9e+03      87     131 ..     148     186 ..     130     190 .] 0.41

  Alignments for each domain:
  == domain 1  score: 53.2 bits;  conditional E-value: 4.7e-18
        MPP6   3 LSsrvlnMKFMkrakkaeekkqeeeeesakklkdssewvldnpekkkkkskiks.............evsnvgfedl..........essvifGRrsFg 78 
                 +Ss+++ MKFM++a+  + ++ ee+ +  k ++ +++w+l ++ +    s++ s                                 e+++++GR sFg
  EPX71510.1   1 MSSKLMSMKFMQKARGIDPRQTEEQLS--KPIVTDEHWSLRKTADA--PSNKNSckfeyessygsliS--------KpenngdtqetEGPAVAGRASFG 87 
                 59***********************99..***********444433..33333334677444444440........35666666668************ PP

        MPP6  79 gfnkeve.e.......kkeeeeeeeekekeedvsdeelakrykks.eslvgtiskkkkkkk 130
                  fnke+e +       +++eeee++ + k e  +++e ++r +++ ++lv+  ++  +k k
  EPX71510.1  88 LFNKELEgNqkdsvenEENEEEESDAPYKMEGLETTERERRNQERlSNLVRGKGNSQAKSK 148
                 *******934577765556666666666666666666666666666666554444433333 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1
        MPP6  87 kkeeeeeeeekekeedvsdeelakrykkseslvgtiskkkkkkkk 131
                 k+++ ++++ ++++ d+   + +k            +kk+k+k+k
  EPX71510.1 148 KNDSHKKRTATDMDRDIISLDTEKSE------ATPKPKKRKNKNK 186
                 33333333333333333333333333......2333344444333 PP

>> Utp14  Utp14 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4  20.5   2.4e-06     0.021     381     547 ..       3     188 ..       1     190 [] 0.45

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 2.4e-06
       Utp14 381 kgllamkFmkraearkkeendeeieel........rrelekgdeeeedeeeeeeee.........................kesknvGrrvfgpskksk 446
                 ++l++mkFm++a+    ++++e++ +         +r+ +++ ++++        +                         +  +++Gr++fg  +k  
  EPX71510.1   3 SKLMSMKFMQKARGIDPRQTEEQLSKPivtdehwsLRKTADAPSNKN--------SckfeyessygsliskpenngdtqetEGPAVAGRASFGLFNK-- 91 
                 79************999999999998777755444333332222222........12234445679999999999999988555789*****99884.. PP

       Utp14 447 kkekkkkkkeskakkekreeeeedeskaaeekakkekskksekkkkkk.keesakeeeeeeeenpwlae.eekkkskkeevaaekssskakkskakakk 543
                 + e ++k+   ++++e++eeee+d+  + e  +++e++++++++ ++  + + ++++   +++n   ++ ++++ +++     +++s+++ k k++++k
  EPX71510.1  92 ELEGNQKD---SVENEENEEEESDAPYKMEGLETTERERRNQERLSNLvRGKGNSQA---KSKNDSHKKrTATDMDRDIISLDTEKSEATPKPKKRKNK 184
                 33333333...3333333333333333323222222222222222222222222222...222222111112222222222222222222222222222 PP

       Utp14 544 kkkk 547
                 +kkk
  EPX71510.1 185 NKKK 188
                 2222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1486  (0.0828825); expected 358.6 (0.02)
Passed bias filter:                      311  (0.0173462); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 1317.19
//
Query:       EPX71511.1  [L=969]
Description: metallopeptidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-85  286.8   1.7    1.6e-85  286.8   1.7    2.2  2  Peptidase_M16_M  Middle or third domain of peptidase_M16
    1.1e-37  129.3   0.0    3.5e-37  127.7   0.0    2.0  1  Peptidase_M16    Insulinase (Peptidase family M16)
    3.3e-32  112.0   1.0    2.6e-20   73.2   0.0    2.6  2  Peptidase_M16_C  Peptidase M16 inactive domain
  ------ inclusion threshold ------
       0.19   11.7   0.0       0.47   10.5   0.0    1.6  1  RL10P_insert     Insertion domain in 60S ribosomal protein L1


Domain annotation for each model (and alignments):
>> Peptidase_M16_M  Middle or third domain of peptidase_M16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  286.8   1.7   3.6e-89   1.6e-85       1     279 []     382     665 ..     382     665 .. 0.97
   2 ?   -0.3   0.1      0.12   5.2e+02     219     245 ..     825     853 ..     817     874 .. 0.66

  Alignments for each domain:
  == domain 1  score: 286.8 bits;  conditional E-value: 3.6e-89
  Peptidase_M16_M   1 FrFkekeepsdyvsslaenmqk.yppedvlsgpylleeydpelikellssLtpenarivlvske...t.dekekwygteYsvekiseelleewk 89 
                      F+ ++k+ +s+y++s+a++mq+ yp++++l++ ++l+++d ++i++++++++p+n+ ++l+s++   + ++ke++yg eY ve++++++le+++
       EPX71511.1 382 FKTRQKTYASQYAHSVASKMQHnYPRDKILYSASVLTNFDMDAIQAVIDCFRPDNLIVILSSHSlekEfNQKEEFYGLEYLVEPLDPSFLESLR 475
                      7778999*************999****************************************6664377************************ PP

  Peptidase_M16_M  90 saeeneeLhLPepNpFiptdfslkkesesepakaPelirdtelvrlWykkDdtFkvPkasvrlklrsplasksprnavltelfvellkdslney 183
                      ++++  eLhLP+pN+Fip ++++++e+ +e+ak P lir++e+vrlW+kkDdtF+vPka+v +++ sp+a+ksp+ +v+t+l+v+l++d+lney
       EPX71511.1 476 TCKPPRELHLPAPNEFIPWSLEVEREPVKEKAKSPGLIRNDEYVRLWHKKDDTFWVPKANVFIQFASPVARKSPKVSVITNLYVRLVEDALNEY 569
                      ***999*****************9887779**************************************************************** PP

  Peptidase_M16_M 184 lydAelAglsyslssskeglelsvsGYndklpvLlekvleklknfeikedrFevikekllrelknfklekpyqqarellsslleekawtleell 277
                      +y+A+lAgls+ l +s++g++l +sG++dkl+vLlekv+  +++++i+++rF++ik+++++elk ++  + y  ++++l++l+e + w ++el 
       EPX71511.1 570 SYPATLAGLSFVLLPSSRGVSLYLSGFTDKLHVLLEKVITVMRDLKIHSQRFDIIKNRYEQELKDYDALEAYPRSSSVLTWLTEYPIWMNSELR 663
                      *******************************************************************************************998 PP

  Peptidase_M16_M 278 ea 279
                      ea
       EPX71511.1 664 EA 665
                      75 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.12
  Peptidase_M16_M 219 ekvleklknf..eikedrFevikekllre 245
                      + +l++lk++  +i+e++F+  k++l++ 
       EPX71511.1 825 RALLDHLKESfaQISEKEFNDHKTSLINF 853
                      55677777634799999999999877643 PP

>> Peptidase_M16  Insulinase (Peptidase family M16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.7   0.0   7.8e-41   3.5e-37       2     141 ..      35     164 ..      34     172 .. 0.94

  Alignments for each domain:
  == domain 1  score: 127.7 bits;  conditional E-value: 7.8e-41
                    EEEEE-TSSSEEEEEEEES-SGGGSCTTTTTHHHHHHHHTTSBBSSSCH.HHHHHHHHHTTCEEEEEEESSEEEEEEEEEGGGHHHHHHHHHHHHH CS
  Peptidase_M16   2 valesdppaktsavglvvdaGSryepkdlnGlAHllehmafkgTkkyps.nklaeeleklGgslnAttsrentvYyvevlskdlekaldvladvfk 96 
                    v+l++dp+++ s+++l v+ GS + pk+l GlAH++eh++f+gTkkyp+ n++ ++le ++g +nA+t    t+Yy+ev +++l +ald+++++f+
     EPX71511.1  35 VLLIRDPETDNSSAALDVHIGSQSNPKELLGLAHFCEHLLFMGTKKYPDeNEYRKYLETNNGMSNAYTASNDTNYYFEVSHDALYGALDRFSQFFI 130
                    8999******************************************************************************************** PP

                    SBTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHTTTSGG CS
  Peptidase_M16  97 aplleesevererkvvekeveavdaepekvveenlhaaayrekal 141
                    +pl+ e + +r       e+ avd+e+     +nl+++ +r+ +l
     EPX71511.1 131 DPLFLEGCKDR-------EILAVDSEH----SKNLQSDDWRFWRL 164
                    ***********.......*********....88888887776555 PP

>> Peptidase_M16_C  Peptidase M16 inactive domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.2   0.0   5.9e-24   2.6e-20       4     166 ..     198     361 ..     197     419 .. 0.93
   2 !   37.1   0.2   7.2e-13   3.2e-09       2     183 .]     669     850 ..     668     850 .. 0.82

  Alignments for each domain:
  == domain 1  score: 73.2 bits;  conditional E-value: 5.9e-24
                      HHHHHHHHHHHSSGGGEEEEEEESS-HHHHHHHHHHHHTTSTHHSHCSGSCTSSSSSGGGSSEEEEEEEESSSSSEEEEEEEEEECTCTHTTHH CS
  Peptidase_M16_C   4 redlkefykkfYrpenmvlaivGdvdheelvkliekyfgdlkaskappakptgepltpatlkkppvvlkkldeeqahlslafegpskendeddl 97 
                      re+l +fy+k+Y+++ m+l+i+G  + ++l++++ ++f+ +k+++   + p+++  ++++ + + ++  k   +   + + f+ p+++++++  
       EPX71511.1 198 REELLKFYDKYYSANLMKLVIIGREPLDTLQEWATEFFSPIKNKS--VPRPRHPGSPYQDEQLRKICYIKPVKNLRRVDMLFPIPGQYSQYECR 289
                      89*****************************************99..777777777777888888877777778******************** PP

                      HHHHHHHHHHSSTTSHHHHHHHTTTTSESEEEEE.EEEESSCEEEEEEEEEECT...THHHHHHHHHHHHHHH CS
  Peptidase_M16_C  98 alavlntlLgggmesrLytnlrekeglaysvsaf.ndsyrdsglfgisatadpe...nveevvevilkelrkl 166
                      + ++  +lLg++ e++    l+ + gl++s +a+  ++++d  + ++s++++ e   ++e v+  ++++++ l
       EPX71511.1 290 PADYVCHLLGHEGEGSYLAYLK-ELGLGTSLVAGsITITEDADIVVVSVSLTEEglaDYERVIRILFEYVQLL 361
                      **********************.*******************************9999999999999998766 PP

  == domain 2  score: 37.1 bits;  conditional E-value: 7.2e-13
                      H-HHHHHHHHHHHSSGGGEEEEEEESS-HHHHHHHHHHHHTTSTHHSH......CSGSCTSSSSSGGGSSEEEEEEEESSSSSEEEEEEEEEEC CS
  Peptidase_M16_C   2 ltredlkefykkfYrpenmvlaivGdvdheelvkliekyfgdlkaska......ppakptgepltpatlkkppvvlkkldeeqahlslafegps 89 
                      +t +d ++f+ +f ++  ++  i+G+   +++++lie  +  l+ ++       +++    ++++   +  +++v +++d +++ +++a++  +
       EPX71511.1 669 VTIDDTYQFISEFTNQIFIESLIHGNYIKDDAKALIETALNILNPKPVfasqltRKRAVVLPKGS--NYIYKTIVPNEKD-KNSAIMYALQIAP 759
                      7999****************************************988777765544444444444..5555555555556.99*********** PP

                      TCTHTTHHHHHHHHHHHHSSTTSHHHHHHHTTTTSESEEEEEEEEESSCEEEEEEEEEECT...THHH.HHHHHHHHHHHHHHHTS-HHHHHHH CS
  Peptidase_M16_C  90 kendeddlalavlntlLgggmesrLytnlrekeglaysvsafndsyrdsglfgisatadpe...nvee.vvevilkelrklkkeglteeelera 179
                        +d+++ al  l++ L+ +   + ++ lr+ke+l+y v+  +++ +   + ++++ +++e    ++e ++ ++l+ l++   + ++e+e++ +
       EPX71511.1 760 M-DDQRSGALTRLARQLMKE---PSFSILRTKEQLGYIVFTLLRQST--PYVYLTVFVQSErssSYLEtRIRALLDHLKESFAQ-ISEKEFNDH 846
                      *.******************...*********************888..77777777777743533334677777777777766.*******99 PP

                      HHHH CS
  Peptidase_M16_C 180 knql 183
                      k+ l
       EPX71511.1 847 KTSL 850
                      9875 PP

>> RL10P_insert  Insertion domain in 60S ribosomal protein L10P
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00011      0.47      26      53 ..     307     334 ..     300     343 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00011
  RL10P_insert  26 epeLrklglptklkkGkivleedylvck 53 
                      L++lgl t+l+ G i+++ed  ++ 
    EPX71511.1 307 LAYLKELGLGTSLVAGSITITEDADIVV 334
                   5689******************977765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (969 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       694  (0.0387082); expected 358.6 (0.02)
Passed bias filter:                      504  (0.0281109); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.72u 0.29s 00:00:01.01 Elapsed: 00:00:00.46
# Mc/sec: 6344.47
//
Query:       EPX71512.1  [L=355]
Description: GTPase Ylf2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.9e-29  101.1   0.2    4.9e-29  100.3   0.2    1.4  1  YchF-GTPase_C  Protein of unknown function (DUF933)
    1.9e-15   56.9   0.0    6.6e-15   55.2   0.0    1.9  2  MMR_HSR1       50S ribosome-binding GTPase
     0.0086   15.6   0.0      0.015   14.8   0.0    1.4  1  FeoB_N         Ferrous iron transport protein B
  ------ inclusion threshold ------
      0.027   14.5   0.0      0.069   13.2   0.0    1.7  1  TGS            TGS domain


Domain annotation for each model (and alignments):
>> YchF-GTPase_C  Protein of unknown function (DUF933)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.3   0.2   1.1e-32   4.9e-29       1      83 [.     271     353 ..     271     354 .. 0.98

  Alignments for each domain:
  == domain 1  score: 100.3 bits;  conditional E-value: 1.1e-32
  YchF-GTPase_C   1 LitffTaGekevraWtikkgttapqaAgviHsDfekgFiraevikyedlvelgseaaakeagklrlegkdyvvqdgDiilfkf 83 
                    L+++fTaG++ v+aWti  +t+ap+aAg+iH+Df+k+F+  e++++ed+ ++g+ +a+k+agk+ ++gkdyvvq gDi+++++
     EPX71512.1 271 LMHYFTAGNNIVQAWTIPLETKAPDAAGAIHTDFKKKFVAGEITNFEDFQKYGTVEACKTAGKTVVKGKDYVVQPGDIVYWRI 353
                    789*****************************************************************************995 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.2   0.0   1.5e-18   6.6e-15       7      97 ..       1     111 [.       1     139 [. 0.76
   2 ?   -1.3   0.0       0.5   2.3e+03      22      42 ..     138     158 ..     129     227 .. 0.60

  Alignments for each domain:
  == domain 1  score: 55.2 bits;  conditional E-value: 1.5e-18
                 STTSSHHHHHHHHHTS.TEEESSSTTSSSSEEEEEEEETTEE.................EEEEECGGCSSHHHHHHHHHHHHHHHHC.TSEEEEEEETT CS
    MMR_HSR1   7 rpNvGKStLinaltge.kaivsdkpgtTrdinegrvklkgke.................ielvDtpGliegaseekglgkaflalee.adlillvvdas 86 
                 +pN GKStL++ lt++   + +++p++T+d++ ++v + +++                 ++++Dt+Gl+ +as+++glg+afl++++ +d+i+ +v+a 
  EPX71512.1   1 MPNIGKSTLFQMLTKTnLGKPANYPFATIDPVSAKVPVPDPRyellcekmnpekripaqLTIYDTAGLVRNASKGQGLGNAFLSNIRtVDAIFQLVRAF 99 
                 59*************9568****************994432244555555555555555********999**************99967*******988 PP

                 ....TTCSHHHHHHH CS
    MMR_HSR1  87 ....eeklkpldeel 97 
                         ++++e++
  EPX71512.1 100 pepdV---THVEETV 111
                 64440...4443333 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.5
                 STEEESSSTTSSSSEEEEEEE CS
    MMR_HSR1  22 ekaivsdkpgtTrdinegrvk 42 
                 ++++ s+ pg+ +++ ++ ++
  EPX71512.1 138 KESRSSKVPGKAKEVAKKVLQ 158
                 556666666666655554443 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   3.4e-06     0.015       9      44 ..       2      38 ..       1      46 [. 0.83

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 3.4e-06
                TTSSHHHHHHHHHTTSE.EEEESTTSSSEEEEEEEEE CS
      FeoB_N  9 pnvGkttlfnaltgakq.kvgNwpGvtvekkegklkl 44
                pn+Gk+tlf  lt+++  k +N+p  t++  ++k+ +
  EPX71512.1  2 PNIGKSTLFQMLTKTNLgKPANYPFATIDPVSAKVPV 38
                9**************95389********988887765 PP

>> TGS  TGS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.5e-05     0.069      18      56 ..     291     349 ..     281     350 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.5e-05
                 -.HHHHHHHHSTTHHHHEEEEEECS...................EEEETTSBB-SSEEE CS
         TGS  18 t.veDfAykIhrslakkfiyAlVnG...................qrvgldhvLedgdvv 56 
                 t + D+A +Ih++++kkf+++ +                        g d+v++ gd+v
  EPX71512.1 291 TkAPDAAGAIHTDFKKKFVAGEITNfedfqkygtveacktagktVVKGKDYVVQPGDIV 349
                 5577*******************999999888888888888877788888888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (355 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       410  (0.022868); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 2424.04
//
Query:       EPX71513.1  [L=636]
Description: BRCT domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.8e-08   33.5   1.5    1.8e-07   31.0   0.1    2.6  2  RTT107_BRCT_5  Regulator of Ty1 transposition protein 107 BRC
    2.4e-07   31.0   0.0    0.00028   21.2   0.0    2.5  2  BRCT           BRCA1 C Terminus (BRCT) domain
    3.8e-07   30.4   0.0     0.0088   16.4   0.0    2.9  2  BRCT_2         BRCT domain, a BRCA1 C-terminus domain


Domain annotation for each model (and alignments):
>> RTT107_BRCT_5  Regulator of Ty1 transposition protein 107 BRCT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.1      0.08   4.8e+02       4      43 ..     185     224 ..     183     246 .. 0.87
   2 !   31.0   0.1     3e-11   1.8e-07       5      99 ..     395     488 ..     362     489 .. 0.76

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.08
                    HHHHHTSSSXXX--EEEEESSS.TT..SSHHHHHHHHHTT CS
  RTT107_BRCT_5   4 ekkkkkkkskpevkiravlTgceeevnkedsdkkkLrklG 43 
                    +k+++k +++++v+   +  ++eee++ ++ + ++L+++G
     EPX71513.1 185 SKSNEKDSKETPVSETSMPANVEEETDSKQIQDRNLEEIG 224
                    56677888889999999999*****999999999999998 PP

  == domain 2  score: 31.0 bits;  conditional E-value: 3e-11
                    HHHHTSSSXXX--EEEEESSS.TT..SSHHHHHHHHHTTEEE-S...GCCT-SEEE-SS---SHHHHHHCCCTTEEE-CHHHHHHHHHTS---SGG CS
  RTT107_BRCT_5   5 kkkkkkkskpevkiravlTgceeevnkedsdkkkLrklGikivq...eakkcntliApkilRTeKFLksLskapkilspdfiedvLkkkklldlee 97 
                    +++k +++ ++  i++v++ ++     ++  ++  +k  ik+++   +a++c +l +p + RT+KFL + s ++ ++s+++i d +k+++ll+ ++
     EPX71513.1 395 EEQKGSTQLQSEGINIVTSSFNL----TKPMQAFAKKKAIKVQEsvtDATNCIILGSPPLRRTHKFLLATSLGKPAISSKYILDSMKEGTLLNYND 486
                    44455555555556666666643....34444444444555555666778888888**************************************** PP

                    GB CS
  RTT107_BRCT_5  98 yl 99 
                    y+
     EPX71513.1 487 YI 488
                    97 PP

>> BRCT  BRCA1 C Terminus (BRCT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   4.7e-08   0.00028      22      78 ..     418     475 ..     400     476 .. 0.86
   2 !    7.3   0.0     0.001         6       2      42 ..     507     551 ..     506     560 .. 0.77

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 4.7e-08
                 HHHHHHHHHHTTCEEESSCSTTSSEEEESSS.HSHHHHHHHHHHTTSEEEETHHHHHH CS
        BRCT  22 rdeleelikehGGkvttevskktthlvvgep.esrslkylealklnipivheewlldc 78 
                 ++ ++ ++k+   kv+++v++ t++++ g+p  +r++k+l a +l++p ++ +++ld+
  EPX71513.1 418 TKPMQAFAKKKAIKVQESVTDATNCIILGSPpLRRTHKFLLATSLGKPAISSKYILDS 475
                 344699***************************************************8 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.001
                 TTTTTTTEEEEEEESTSSHHHHHH........HHHHHHTTCEEESSCST CS
        BRCT   2 kellfhgckfvitgvldnftrdel........eelikehGGkvttevsk 42 
                 k  +++g+kf+i    ++  r+++         ++i+  G+kv++++ +
  EPX71513.1 507 KRHCLEGLKFYI----TSAMRSSMvgdslhglYSIIETSGAKVVEDIQE 551
                 5789********....4444444444444999***********998865 PP

>> BRCT_2  BRCT domain, a BRCA1 C-terminus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   1.5e-06    0.0088      54      84 ..     451     487 ..     419     488 .. 0.76
   2 !   10.6   0.0   9.8e-05      0.59       4      42 ..     510     552 ..     507     591 .. 0.77

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 1.5e-06
      BRCT_2  54 e......laekrkrrvvspkyIkdCikkgkllpleny 84 
                        la + +++++s kyI d+ k+g+ll++++y
  EPX71513.1 451 RrthkflLATSLGKPAISSKYILDSMKEGTLLNYNDY 487
                 244556667777999*********************9 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 9.8e-05
      BRCT_2   4 lFeglrFYin....daepspsreklkklIeknGGevvetitsa 42 
                   egl+FYi     ++  ++s + l ++Ie+ G +vve+i++a
  EPX71513.1 510 CLEGLKFYITsamrSSMVGDSLHGLYSIIETSGAKVVEDIQEA 552
                 5689*****87885545559*****************999554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (636 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1760  (0.098165); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.75u 0.32s 00:00:01.07 Elapsed: 00:00:00.50
# Mc/sec: 3797.53
//
Query:       EPX71514.1  [L=206]
Description: 2',3'-cyclic-nucleotide 3'-phosphodiesterase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.3e-07   30.2   0.0    3.8e-07   30.0   0.0    1.1  1  CPDase           Cyclic phosphodiesterase-like protein
     0.0081   15.7   0.0       0.25   10.9   0.0    2.4  2  DUF4964          Domain of unknown function (DUF4964)
  ------ inclusion threshold ------
      0.036   14.0   0.0      0.048   13.6   0.0    1.1  1  2_5_RNA_ligase2  2'-5' RNA ligase superfamily


Domain annotation for each model (and alignments):
>> CPDase  Cyclic phosphodiesterase-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.0   6.4e-11   3.8e-07       4     115 ..      30     140 ..      27     178 .. 0.79

  Alignments for each domain:
  == domain 1  score: 30.0 bits;  conditional E-value: 6.4e-11
      CPDase   4 sLWlcPpansp...eyetlktlIqsLqtlfpdsev.FePHvTltselsvdskddvekvlds.avaalksvrsglaalvkfegvsvgkkYfkkvvlevkk 97 
                  +W++P+ +s     y ++     s +++f++  +  +PHvTl  +++++  +  e vl++ a++ ++ +       +kf  v+ g++Yf++v+ ++ +
  EPX71514.1  30 CIWIVPAYSSEveiRYRKFTKWALSHEEDFQNMRLpTAPHVTLAKGIHLKEGQSFESVLKHiASKKISPM------DIKFGKVALGNTYFDRVHYQILR 122
                 68999988775222577777777888899999865369*********************98555555544......79********************* PP

      CPDase  98 dkellslaqlireafvea 115
                 ++ l +l q + e   e+
  EPX71514.1 123 TPALNELQQAAYELVDEN 140
                 *******99887765443 PP

>> DUF4964  Domain of unknown function (DUF4964)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0     0.023   1.4e+02      16      34 ..      54      72 ..      45      96 .. 0.84
   2 !   10.9   0.0   4.1e-05      0.25      10      68 ..     131     190 ..     120     196 .. 0.80

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.023
     DUF4964 16 fkeekkseLRaPayPLvti 34
                ++ee  +++R+P+ P vt+
  EPX71514.1 54 SHEEDFQNMRLPTAPHVTL 72
                56778899*******9996 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 4.1e-05
     DUF4964  10 akakklfkeekkseLRaPayPLvtidpylsiWsftdeLnd.esvkhwtgkdlpllgvlrV 68 
                 ++a +l++e+ + e R P +PL+  +     W ++d L   +s+   + ++ ++l +++V
  EPX71514.1 131 QAAYELVDENFSDETREPYMPLIYAEAVEGYWGTSDPLLSlSSISNVNWENPSFLELVQV 190
                 5566778899999***********************987525666666677777777776 PP

>> 2_5_RNA_ligase2  2'-5' RNA ligase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   8.1e-06     0.048      23     109 ..      65     151 ..      41     153 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 8.1e-06
  2_5_RNA_ligase2  23 rwppHitLlypfvededladlaellsrlak.etepfevrldgfgvFehkksvvylsvsdsealqalraallealpeagdkedsgeftP 109
                         pH+tL+     +e  + ++++l+++a+  ++p+++ +++++   +  + v+ ++  ++al++l++a +e + e  ++e+++++ P
       EPX71514.1  65 PTAPHVTLAKGIHLKEG-QSFESVLKHIASkKISPMDIKFGKVALGNTYFDRVHYQILRTPALNELQQAAYELVDENFSDETREPYMP 151
                      345**************.*********997589************98766677777789999**999999998887766666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (206 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       448  (0.0249875); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1499.83
//
Query:       EPX71515.1  [L=989]
Description: alpha,alpha-trehalose-phosphate synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   5.8e-159  529.8   0.0   7.9e-159  529.3   0.0    1.1  1  Glyco_transf_20  Glycosyltransferase family 20
    2.8e-51  173.9   0.0    4.4e-51  173.3   0.0    1.3  1  Trehalose_PPase  Trehalose-phosphatase


Domain annotation for each model (and alignments):
>> Glyco_transf_20  Glycosyltransferase family 20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  529.3   0.0  8.8e-163  7.9e-159      19     470 ..     241     695 ..     231     699 .. 0.97

  Alignments for each domain:
  == domain 1  score: 529.3 bits;  conditional E-value: 8.8e-163
                      .SCG..EEECCGSSHHHHHCCCHHCC......C-EEEEEEECCES-CCC...HCCCCHHHCCCCCEEEEEE-HHHHHHHCCCHHHHCHHHHHTT CS
  Glyco_transf_20  19 eeekeeyelkkssgglvsalkglkee......tevvwvgwlgvevdesee.akekvskeleekfsvvpvflsdekveeyyngfsksvLWpllHY 105
                      +++k +y++  +s g++s++++++++      +e+ ++g++gv++d+ ++  k+k+s+++ + +++++v+ sd+++  +yn+++k++LWp++HY
       EPX71515.1 241 AWKKISYRILPNSYGNASFYNAVHAAdrtgkfDEHFFIGTSGVPTDSLPDmVKQKISDDYLTSHKSIVVYPSDTDFVGHYNHYCKNILWPTFHY 334
                      5788899999999*********99998888887889**************9******************************************* PP

                      -GG....G----HHHHHHHHHHHHHHHHHHHCC--TT-EEEEESGGGTTHHHHHHHCCTTSEEEEEE-S----HHHHTTSTTHHHHHHHHTTSS CS
  Glyco_transf_20 106 klpdsseekefersawdaYvkvnklFAdkiveeikdgdliwvhDYhLmllPellRkkledakigfflHiPFPsseifriLpvreeilegllgad 199
                      ++pd++++k++e+++w++Yvkvn++FAd i++++++gd++w++DYhL+l+P+++R+k++ a+igfflHiPFPsse+ r+L++r+eil+g+lga+
       EPX71515.1 335 QIPDNPKSKAYEDHSWANYVKVNQKFADSILANYREGDMVWINDYHLLLVPQMVREKIPAANIGFFLHIPFPSSEVSRCLATRQEILRGMLGAN 428
                      ********************************************************************************************** PP

                      EEEESSHHHHHHHHHHHHHHSSEEEECTTEEEEETTEEEEEEE------HHHHHHHCCSCHHHHHHHHHHHHT.TTSEEEEEEEEC-GGG-HHH CS
  Glyco_transf_20 200 liGFhtedyarhFlsccsrllgleveskrggveykgrkvsvkalpigidverlesalkkesvsekvkelkerfenkkklilgvDrlDyikGvkq 293
                      ++GF+++++a hFl++csrl++++++++  +v+++grk+++ alpi+id+++l+++l++++v+++++ l++rf++k ++il++D+lD i+G+++
       EPX71515.1 429 ILGFQIPEFAYHFLQTCSRLINIDIRKDG-TVSLDGRKIEIVALPISIDPAALDKQLQSNQVQHWIRVLRDRFKGK-HIILSHDKLDPICGLRS 520
                      ****************************6.5******************************************996.***************** PP

                      HHHHHHHHHHH-GGGTTTEEEEEEEEB-STTSHHHHHHHHHHHHHHHHHHHHH-BTT..B-SEEEEES---HHHHHHHHHH-SEEEE--SSBSS CS
  Glyco_transf_20 294 kllaferfLeeypelrgkvvlvqiavpsredveeyqelekeveelvgrINgefgtld..ytPvvylersldfeeliallaaadvllvtslRdGm 385
                      kll+fe fL++yp++r++++l+qia++s +d+     +   ++++v+rIN+ ++++   ++Pv++l+++++ ++++al++++d+l+ +slR+G+
       EPX71515.1 521 KLLSFEIFLHRYPQYRENTILLQIAPESLQDNL----HLPLISDIVTRINSSYSNIAsrHVPVILLRQKISIHQFLALMTISDALIDNSLREGI 610
                      ********************************9....89****************9888*********************************** PP

                      -CHHHHHHHCSTTT--EEEEETTBGGGGT-TTTSEEE-TT-HHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHT-HHHHHHHHHH CS
  Glyco_transf_20 386 nlvakeyvvcqqekkgvLiLSeFaGaaqsLkdaailvNPwdieevaeaikeaLkmseeerkkrekkllkqvskhdvqsWaesfls 470
                      +l++++++++q+e++++LiLSeF+G++++L ++ai+vNPwd++++a+a+++aL+ms+ e+++r+k +++ +++hd++sWa +f +
       EPX71515.1 611 SLTSHQFIYAQRERHRPLILSEFVGSSSILGHNAIVVNPWDYSNTADAFYKALSMSPSECEERSKVMCNLILRHDATSWAITFGT 695
                      ********************************************************************************98865 PP

>> Trehalose_PPase  Trehalose-phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  173.3   0.0   4.9e-55   4.4e-51       1     231 [.     732     973 ..     732     975 .. 0.93

  Alignments for each domain:
  == domain 1  score: 173.3 bits;  conditional E-value: 4.9e-55
                      EEETBTTTB---SSGGG--B.-TTHHHHHHHHHTTS-..EEEE-SS-HHH.HHHHH---SSEEEEGGGTEEE-TT--EEE-............H CS
  Trehalose_PPase   1 flDydGTlspivedpdaavp.ssellslLkkLasdpknvvaivSGrslke.eellvkvpelglaaeHGaeirspsgedwen............q 80 
                      fl+++GT++ + +++++++   +++++lL +L++dpkn+v+i+S+ +++e  +l+++vp+lgl+ae+G+++r+p   d+              +
       EPX71515.1 732 FLYFEGTITSWGSQNQSVTSgLQRTVNLLTDLTADPKNTVYIISALGRQElDQLFQRVPRLGLVAENGCFTRAPPTADALPpseqqiaalwksE 825
                      89***********9777766379***************************99************************888779999******988 PP

                      HHHTTHHHHHHHHHHHHHHHTTSTT-EEEEETTEEEEE-TT--TT..THHHHHHHHHHHHHHH.--EEEE-SSEEEEE-S---HHHHHHHHHHT CS
  Trehalose_PPase  81 aevedlewlkevkeileektertpGsyiEekkfalsvHyrnaddeelqakelaehlesvltdkpdlevtqgkkvvevrpqgvsKGkaverlles 174
                          dl+w+k+v ei+ +++er  Gsy+Eek++++++H r+a+d e++ ++++e++esv++ + ++++t +++ v +r+++vsK+ ave++++s
       EPX71515.1 826 IKDVDLSWIKTVTEIFSYYAERAAGSYVEEKDASVALHLREAEDPEFASWAAKECCESVNNFDIPCRATIQNDTVICRSSKVSKRLAVEDIYKS 919
                      8889****************************************************************************************** PP

                      S--------EEEEEE-SSTTHHHHTTS-TT...-EEEEE--TTS---EES-SEEESS CS
  Trehalose_PPase 175 lgsadseddfvlciGDdrtDedmFsvlrktkesgvsievsavevgskpskakyslds 231
                      +g +    df++ +++  +D+++F+++   k+ g +  + ++ ++  + +++y++++
       EPX71515.1 920 NGAD---FDFIFSASNETDDDSVFRWIAGFKHMGPKPPFTHTVYVGDHDYGTYADSE 973
                      **99...*********************99777766666666667777777776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (989 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       684  (0.0381505); expected 358.6 (0.02)
Passed bias filter:                      508  (0.028334); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.79u 0.29s 00:00:01.08 Elapsed: 00:00:00.46
# Mc/sec: 6492.95
//
Query:       EPX71516.1  [L=406]
Description: NAD binding dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.8e-71  238.3   0.1    2.6e-71  237.8   0.1    1.2  1  ox_reductase_C  Putative oxidoreductase C terminal domain
    4.1e-19   69.6   0.0    6.7e-19   68.9   0.0    1.3  1  GFO_IDH_MocA    Oxidoreductase family, NAD-binding Rossmann f
     0.0039   17.2   0.0      0.007   16.4   0.0    1.5  1  GFO_IDH_MocA_C  Oxidoreductase family, C-terminal alpha/beta 


Domain annotation for each model (and alignments):
>> ox_reductase_C  Putative oxidoreductase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  237.8   0.1   4.4e-75   2.6e-71       1     142 []     189     331 ..     189     331 .. 0.99

  Alignments for each domain:
  == domain 1  score: 237.8 bits;  conditional E-value: 4.4e-75
  ox_reductase_C   1 rylkvvqkmkkiikennlkvvatnaryvsayehaakkawweksisaGpvveqathfcdlsryfgGdvdldtvkaksvewyekaGklskipvdesk 95 
                     rylkvvqk+k+ii+e+nlkvv+t+a+y+say+h++k++ww +s+s+Gpvveq+thfcdlsr+fgGdvd++tv +++v+w++ +Gkls++p+de+k
      EPX71516.1 189 RYLKVVQKAKEIIREKNLKVVSTIAKYNSAYIHNNKVFWWVMSQSGGPVVEQGTHFCDLSRFFGGDVDTSTVRVQRVNWDDAPGKLSAMPFDENK 283
                     9********************************************************************************************98 PP

  ox_reductase_C  96 .ipederiprltsaswkyksGavGslehavalqGtkystelevladGy 142
                      +p +eripr+t+a wkyk+G+vGs++h+++lqGtky+t++ev+adGy
      EPX71516.1 284 eVPPHERIPRFTAAVWKYKEGGVGSFTHNITLQGTKYDTCIEVQADGY 331
                     8**********************************************9 PP

>> GFO_IDH_MocA  Oxidoreductase family, NAD-binding Rossmann fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.9   0.0   1.1e-22   6.7e-19       1     119 [.      35     185 ..      35     186 .. 0.91

  Alignments for each domain:
  == domain 1  score: 68.9 bits;  conditional E-value: 1.1e-22
                   EEEEEETTSHH..HHHHHHHHHHTTTTE.......EEEEEECSSHHHHHHH....HHHTTHEEESS..........HHHHHTCT..TESEEEE-S-G CS
  GFO_IDH_MocA   1 lrvaiiGaGki..gskhlrplnesqrle.......evvalldpdaeraeav....aesfgveaysd..........leelladp..eidavivatpn 72 
                   + +ai+G+G i  gs ++ p+n+s++le       +v+all+p+++++e+v    ae+  +++y+           +++l ++p   ++a i+++p+
    EPX71516.1  35 FTCAIFGCGGInfGSAEG-PWNNSEKLElvlghrlKVIALLSPHKSSHERVlkqkAETPYASCYNTvqefysadeyIQYLTEHPgeLPHAFIIGIPP 130
                   679***************.*****9999***********************9999999999999999999999**9999***99977********** PP

                   ......GGHHHHHHHHHHTT-..EEEEESSS-S.SHHHHHHHHHHHHHHTS-EEEE CS
  GFO_IDH_MocA  73 ......gtheelakaaleagk..hvllEKPlat.tveeakelvelaekkgklvsvg 119
                           ++++++a+l++++  ++++EKP+++ +ve+a+++++   k+ + +svg
    EPX71516.1 131 ethgstAPGADMELALLKRFPnaSLFIEKPISAaPVEDAFAVAKQIPKEAV-ISVG 185
                   777655559**********************999*********99998874.5666 PP

>> GFO_IDH_MocA_C  Oxidoreductase family, C-terminal alpha/beta domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   1.2e-06     0.007      29      75 ..     223     268 ..     198     310 .. 0.79

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 1.2e-06
                     HHCCGGSHHCSTSHHHHTCHHHHHHHHHHHTSEEEEEEEEE.SEEES CS
  GFO_IDH_MocA_C  29 kkrwkrrkkksgGvlgdlgiHdiDllqwLfGqppsvvaalgrmrqna 75 
                      k  ++ + +sgG +++ g+H+ Dl +++ G + ++++  +r ++++
      EPX71516.1 223 NKVFWWVMSQSGGPVVEQGTHFCDLSRFFGGDVDTSTVRVQR-VNWD 268
                     3334556789*************************9999987.5555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (406 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       554  (0.0308997); expected 358.6 (0.02)
Passed bias filter:                      496  (0.0276647); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 2647.64
//
Query:       EPX71517.1  [L=405]
Description: pyruvyl transferase Pvg1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.9e-26   91.3   0.1      2e-25   90.3   0.1    1.5  1  PS_pyruv_trans  Polysaccharide pyruvyl transferase
  ------ inclusion threshold ------
        0.1   11.5   0.3        1.1    8.1   0.1    2.0  2  Hyphal_reg_CWP  Hyphally regulated cell wall protein N-termin


Domain annotation for each model (and alignments):
>> PS_pyruv_trans  Polysaccharide pyruvyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.3   0.1   2.2e-29     2e-25       1     283 [.     107     359 ..     107     362 .. 0.85

  Alignments for each domain:
  == domain 1  score: 90.3 bits;  conditional E-value: 2.2e-29
                     -HHHHHHHHHHHHHHHHTT-EEEEEESSTTT--HHHHHHHHHTS-GGGEE................EEE--E....EEEETT-HHHHHHHHHHHH CS
  PS_pyruv_trans   1 NyGDelilealvklLrelgpdaeiivltpdpsetkkllkvktpilkklskvllkrlrkkdiddaddviivGgdgtlgndgdlsrlpdalrllfla 95 
                     N+GD +i+ a +klL+ l++ +++i  +  +++++ l  + +   + ++                 + ++Gg    gn+gdl++ ++ lr + + 
      EPX71517.1 107 NKGDSAIYIAERKLLEVLDIQVVYICSSQSDYSASSLKAIVQESSPEEFA----------------FAFHGG----GNFGDLYPDHQQLRENVIH 181
                     9***************************9999999988888888876554................999999....9*****9999********* PP

                     HS-SSEEEE-SEEE..-S-HHHHHHHHHHHHHTTE..EEESSHHHHH.HHHHHHTT..-EEE---GGGGG---HHHHHHS-------------SS CS
  PS_pyruv_trans  96 kkagkpviilgqgiGpflnealrkllkkilakadl..isvRdelSaelleslglkr..nveltpDpaflleqlapseiletdkrkylrvakssek 186
                     ++++ ++++++q+i ++++e  +++ ++++a +++  +++Rd++S+     +g+ +  ++ ltpD++f++++l + ++ +++k++ l +a+ +  
      EPX71517.1 182 DFPNGRFVSFPQSI-WYNDETALQQTANLYAEHSQiqLAFRDRQSYL-TGVNGFGEnnEILLTPDIVFFMGTLSDIRETTPIKSDVLILARLDH- 273
                     **************.*****************7776***********.77777777************99988887777554444444444444. PP

                     --EE---SSS---HH...............................HH-TTS-HHHHHHHHHHHHHHHHHTSSEEEE--HHHHHHHHHHT--EEE CS
  PS_pyruv_trans 187 dledleellakvydlllekgarllllpivkkdglelddlyllllraaakkekvtildrfaspeellsliaradfvitsRlHglifalsfgvPvig 281
                       e+  ++       l+ +g +   + ++ +d+l+ d +       a +++  +  +++      + ++a++++vit+RlH++i+++++g+P+i+
      EPX71517.1 274 --EGGQQH---SSESLYHEGLTSGNVTYSVEDWLSWDPEE------ATNSDATFDTKGESRFLSGAHFLASHKAVITDRLHAHILSTLMGIPHIV 357
                     ..333333...34444448888889999999999999888......7777888888899***********************************9 PP

                     E- CS
  PS_pyruv_trans 282 is 283
                     + 
      EPX71517.1 358 VE 359
                     97 PP

>> Hyphal_reg_CWP  Hyphally regulated cell wall protein N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0     0.015   1.3e+02     191     238 ..     110     164 ..     107     175 .. 0.76
   2 ?    8.1   0.1   0.00012       1.1     202     246 ..     200     245 ..     183     269 .. 0.71

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.015
  Hyphal_reg_CWP 191 dssiyi.snsllsissdqtiYLadsssslvvesvsk......pqtfkvagFGngn 238
                     ds iyi + +ll++   q +Y+ +s+s   ++s ++      p++f  a  G+gn
      EPX71517.1 110 DSAIYIaERKLLEVLDIQVVYICSSQSDYSASSLKAivqessPEEFAFAFHGGGN 164
                     78999944555799999*********99999555433444447778888888887 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.00012
  Hyphal_reg_CWP 202 sissdqtiYLadsssslvvesvskpqt.fkvagFGngnkigltlpl 246
                     +++ +qt  L  ++s++++    +++    v+gFG++n+i lt  +
      EPX71517.1 200 ETALQQTANLYAEHSQIQLAFRDRQSYlTGVNGFGENNEILLTPDI 245
                     345667777777777777755553344599**********997665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (405 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       569  (0.0317363); expected 358.6 (0.02)
Passed bias filter:                      488  (0.0272185); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 2671.27
//
Query:       EPX71518.1  [L=254]
Description: nicotinamide N-methyltransferase Nnt1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.9e-11   44.0   0.0    2.3e-11   43.7   0.0    1.1  1  Methyltransf_16  Lysine methyltransferase
  ------ inclusion threshold ------
       0.02   14.2   0.0      0.028   13.7   0.0    1.2  1  GidB             rRNA small subunit methyltransferase G
      0.036   13.2   0.0      0.053   12.7   0.0    1.2  1  NNMT_PNMT_TEMT   NNMT/PNMT/TEMT family


Domain annotation for each model (and alignments):
>> Methyltransf_16  Lysine methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.7   0.0   3.8e-15   2.3e-11      18     170 ..      54     211 ..      40     215 .. 0.82

  Alignments for each domain:
  == domain 1  score: 43.7 bits;  conditional E-value: 3.8e-15
  Methyltransf_16  18 grkvWdaavvlvkylekklakelganelsklsvlELGsGtGlvGlavaellpeakviltDlee..llellkknielnknalkskvkvevLdWge 109
                      ++ +W++++vl+ ++        + + ++++ vlE G+G+Gl  ++ a   +  +v+ +D+++  l+++l +n++  +  +k+k ++    Wg 
       EPX71518.1  54 AHYLWNSGIVLSNFIDA------HPEVVQGKFVLEFGAGAGLPSVISAFN-GAKHVVCSDYPDlpLIQNLDQNMKRYQ-EIKEKTSAVGYLWGS 139
                      7789***********99......7899****************9988888.8999*******9778999*****9955.999999999999**9 PP

  Methyltransf_16 110 eleed.....llekeevDlilaaDcvYledslelLvkvLkellkkesk....vlvaykkr..reaekkFfkl 170
                      ++++      l e + +D+ l +D+v+++   ++Lv++ k  +  +++    v++++++    +++  Ff+ 
       EPX71518.1 140 DVQDLrnyagLSEGQYFDVLLLSDLVFNHTEQTKLVRSCKAAMGDNKHaiayVFFTHHRPhfADKDLIFFDI 211
                      9955322222578899**************************999998866555555555333444456665 PP

>> GidB  rRNA small subunit methyltransferase G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   4.7e-06     0.028      28      68 ..      50      96 ..      42     124 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 4.7e-06
                HHHHHHCHHHH.HHHGGCS-CCC-......EEEETSTTTTTHHHHHH CS
        GidB 28 eellerhllds.lsvlellkekrd....k.viDvGsGaGlPGipLai 68
                ++l+ + l++s ++++++++ + +    k v+  G+GaGlP+++ a+
  EPX71518.1 50 HSLWAHYLWNSgIVLSNFIDAHPEvvqgKfVLEFGAGAGLPSVISAF 96
                5899******96677777777666665448*************9776 PP

>> NNMT_PNMT_TEMT  NNMT/PNMT/TEMT family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   8.8e-06     0.053      53      93 ..      73     117 ..      60     141 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 8.8e-06
                     SSS-ECEEEEET-TT--GGGTTGGGTECEEEEEESSH....HHHH CS
  NNMT_PNMT_TEMT  53 gekkgdtllDiGaGPTvyqllsarevakeitlsDyld....qNrd 93 
                     + ++g+ +l++GaG  + +++sa + ak+++ sDy d    qN+d
      EPX71518.1  73 EVVQGKFVLEFGAGAGLPSVISAFNGAKHVVCSDYPDlpliQNLD 117
                     66889******************************8733334544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       475  (0.0264934); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.34s 00:00:00.99 Elapsed: 00:00:00.58
# Mc/sec: 1327.70
//
Query:       EPX71519.1  [L=372]
Description: esterase/lipase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-07   31.1   0.1     0.0018   17.3   0.0    2.1  2  COesterase       Carboxylesterase family
     0.0013   17.8   0.1     0.0022   17.1   0.1    1.3  1  Chlorophyllase   Chlorophyllase
     0.0061   15.5   0.1     0.0097   14.8   0.1    1.3  1  Chlorophyllase2  Chlorophyllase enzyme


Domain annotation for each model (and alignments):
>> COesterase  Carboxylesterase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.1   1.4e-05     0.086      88     142 ..     176     222 ..     162     223 .. 0.78
   2 !   17.3   0.0   2.9e-07    0.0018     168     210 ..     239     281 ..     237     302 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.4e-05
                 -EEEEEEESSSSSTTSSEEEEEEE--STTTS-BGCGS-THHHHHHHTSEEEEE-- CS
  COesterase  88 LyLnvytPkekkeakkklPVlVwihGggfqtgsaseydgsaLaaegnvivVtinY 142
                 L Ln++tP++k  +++  PV+ w+ G +    +a+++   +La+  + +vV  nY
  EPX71519.1 176 LLLNIFTPDDK--STNH-PVVLWVCGRN----KAESVIIPYLASL-GFVVVVPNY 222
                 89******754..5666.******9965....5566677778887.677777777 PP

  == domain 2  score: 17.3 bits;  conditional E-value: 2.9e-07
                 HHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSGGGTT CS
  COesterase 168 lALrWVkenIasFGGdpervtlfGesAGaasvsllllsplsrg 210
                 l ++W++e I  F+Gd +++  +Ge+ Gaa++   l  +l ++
  EPX71519.1 239 LCVEWISECIYCFNGDANQIYSVGEDTGAAVIMECLSKELPAN 281
                 5689**************************9987766665555 PP

>> Chlorophyllase  Chlorophyllase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.1   3.6e-07    0.0022      35     106 ..     178     247 ..     165     262 .. 0.85

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 3.6e-07
  Chlorophyllase  35 liivtPaeaGt.ypvvlflhGtllsnkfyskllnhiashGfivvaPqlykllpPsaqdeidsaaevieWlseg 106
                     l i tP ++ t +pvvl++ G   +nk  s ++ ++as Gf+vv P+  +    s+ + +      +eW+se 
      EPX71519.1 178 LNIFTPDDKSTnHPVVLWVCG---RNKAESVIIPYLASLGFVVVVPNYAQPPKYSTAESVLFVKLCVEWISEC 247
                     6788998876439*****999...79********************987766678888888888889998875 PP

>> Chlorophyllase2  Chlorophyllase enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.1   1.6e-06    0.0097       5      75 ..     177     246 ..     173     259 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.6e-06
  Chlorophyllase2   5 pllvvaPteag.eYpvllflhGylllnslYsqlLkhiashgfivvapqlykvaeada.keiksaakvlnWlak 75 
                       l +++P ++  ++pv+l++ G   +n+  s ++  +as gf+vv p+  +  + ++ + +  ++  ++W+++
       EPX71519.1 177 LLNIFTPDDKStNHPVVLWVCG---RNKAESVIIPYLASLGFVVVVPNYAQPPKYSTaESVLFVKLCVEWISE 246
                      57899**8765279******99...5677789****************9996566665899999999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (372 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       432  (0.024095); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.28s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2640.56
//
Query:       EPX71520.1  [L=490]
Description: DNA replication protein Cdc24 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.3e-18   66.1   1.1    4.3e-18   66.1   1.1    2.1  2  CDC24_OB2  Cell division control protein 24, OB domain 2
    1.1e-13   51.3   0.2    2.6e-13   50.1   0.2    1.6  1  CDC24_OB1  Cell division control protein 24, OB domain 1
  ------ inclusion threshold ------
      0.036   13.8   0.2      0.063   13.0   0.2    1.4  1  CDC24_OB3  Cell division control protein 24, OB domain 3


Domain annotation for each model (and alignments):
>> CDC24_OB2  Cell division control protein 24, OB domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.1   1.1   7.2e-22   4.3e-18       4      76 ..     107     173 ..     103     196 .. 0.89
   2 ?   -1.1   0.4      0.43   2.6e+03      29      64 ..     365     396 ..     344     464 .. 0.61

  Alignments for each domain:
  == domain 1  score: 66.1 bits;  conditional E-value: 7.2e-22
   CDC24_OB2   4 dsassntidlyLHqkFyslvhesepfplkknrtlrltncrlrertelskqlrlLPTellvilLdeesdlDkal 76 
                 +++++nt+dl+LH+++y+l+h  +pf+++k + +r+++++l++++ l+k+l++LPT++++++L      D  +
  EPX71520.1 107 KDRRQNTCDLMLHSSYYLLFH--SPFDILKHSFVRFSRANLYPKWFLKKKLQFLPTTYFLPTLG----ADTFF 173
                 5888*****************..89**************************************9....56555 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.43
   CDC24_OB2  29 fplkknrtlrltncrlrertelskqlrlLPTellvi 64 
                 +++++n   r++n+r +++      +++LP +l v+
  EPX71520.1 365 SNFLRNDLKRFKNLRPHTQGH----IKVLPLQLDVF 396
                 456666666666666665555....66666555444 PP

>> CDC24_OB1  Cell division control protein 24, OB domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.1   0.2   4.4e-17   2.6e-13       1      67 [.       3      63 ..       3     101 .. 0.73

  Alignments for each domain:
  == domain 1  score: 50.1 bits;  conditional E-value: 4.4e-17
   CDC24_OB1  1 flklveearskLkqleeekddknaeksssrvpWsWiasrllklleeYssGvTeaIllseLeqaweeq 67
                f++l++e+++kL+++  ++ ++ + ++      sWi++++ +l+eeY+sG+T+aIll+eLe++ +e+
  EPX71520.1  3 FENLIKEIQQKLEKNIVNHGNSVSIEE------SWIINNVFRLFEEYPSGITWAILLNELELTCTER 63
                89*************998877655555......*****************************93332 PP

>> CDC24_OB3  Cell division control protein 24, OB domain 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.2     1e-05     0.063       8     112 ..     287     371 ..     282     427 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1e-05
   CDC24_OB3   8 nvtLlGrvvaifreknsekkkmdryslrieDttGaidatlweeagklhfkrlrvGhlvllsgLatsetkqskklevswvegecgaslvnlStlpallnS 106
                 +v++ Grvv i+          d  ++ ++ ++G  ++     ++kl  + + +G+ ++ ++L    ++++k +  s+++      l+ +S+l+++lnS
  EPX71520.1 287 HVWITGRVVSIS---------PD--IISLDCSNGLKEVKF--TTEKLLHN-IVPGEQIVATSLKQDPDSKEKYTVSSYTN------LLSISQLNCPLNS 365
                 799999999993.........45..677777788777744..44588888.99**********99999977766666655......59*********** PP

   CDC24_OB3 107 scLrkl 112
                 ++Lr+ 
  EPX71520.1 366 NFLRND 371
                 ****64 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (490 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       534  (0.0297841); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 3357.00
//
Query:       EPX71521.1  [L=295]
Description: nuclear envelope protein Brr6/Brl1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.8e-33  113.3   4.0    9.3e-33  112.8   4.0    1.2  1  Brr6_like_C_C  Di-sulfide bridge nucleocytoplasmic transport 


Domain annotation for each model (and alignments):
>> Brr6_like_C_C  Di-sulfide bridge nucleocytoplasmic transport domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.8   4.0   5.2e-37   9.3e-33       2     132 ..     123     247 ..     122     248 .. 0.95

  Alignments for each domain:
  == domain 1  score: 112.8 bits;  conditional E-value: 5.2e-37
  Brr6_like_C_C   2 sylqllfnlllvllllylvisfvltikkDiekkleekkaellaeieeCkkeYeeNkCdpetrvpaleekCeewekCmnrdpeskverakvsaetla 97 
                     ylqllfn+++v+++ly+++s+v+t++ Di++++++++a l+++++eC+++Y++  Cd  +   a+ + C++++ C+ r+    +++++++a++la
     EPX71521.1 123 GYLQLLFNVCIVSIVLYFLFSLVFTMQGDIRNNISTERALLAYKAMECQRDYNKYDCD--SPSSAISKVCDDLRVCILRK----TSNTRLVAKILA 212
                    7********************************************************6..4667*************996....567********* PP

  Brr6_like_C_C  98 eiinsfvepislktllfllllllivlfvsnvafgf 132
                    eii++fv++is+kt++f lll+++ l++sn+af++
     EPX71521.1 213 EIIDTFVNHISYKTMIFSLLLVFGSLIASNYAFSL 247
                    *********************************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (295 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       939  (0.0523733); expected 358.6 (0.02)
Passed bias filter:                      512  (0.0285571); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2194.67
//
Query:       EPX71522.1  [L=241]
Description: hypothetical protein SOCG_01739 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (241 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       397  (0.0221429); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.63u 0.33s 00:00:00.96 Elapsed: 00:00:00.57
# Mc/sec: 1262.48
//
Query:       EPX71523.1  [L=398]
Description: U3 snoRNP-associated protein Cic1/Utp30 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.6e-59  199.1   1.0    1.2e-58  198.2   1.0    1.5  1  Ribosomal_L1  Ribosomal protein L1p/L10e family


Domain annotation for each model (and alignments):
>> Ribosomal_L1  Ribosomal protein L1p/L10e family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  198.2   1.0   6.8e-63   1.2e-58       3     204 .]      22     248 ..      20     248 .. 0.90

  Alignments for each domain:
  == domain 1  score: 198.2 bits;  conditional E-value: 6.8e-63
                   HHS-SSS--E...................EEEEEEESSS-TTSGGG-.-EEEEE-STS.TSSCS-EEEEE-HHHHH...HHHHTT.....-SEEETC CS
  Ribosomal_L1   3 khakkkfdes...................veialnlttkkpkkadqr.kpgkipLphp.lgkevkiclitkdpqaeyakeakeag...riakviglk 75 
                    ++kkk +e+                    +++l+l+t+k+++++++ +p kipL+h+ + ++ + cli+kdpq++y++ ++eag    +++vig++
    EPX71523.1  22 DYEKKKGEENkgnseanksnlledeedttSTVWLQLSTLKFITNNRKlIPFKIPLKHSiIPSSYEACLIVKDPQRTYKDLVSEAGmsgVVTRVIGIS 118
                   556665555555566666666666677779*************9999***********55566**************99****************** PP

                   HHHHHHT-HHHHHHTCCH-SEEEEEGGGHHHHHHHCHHHHGGGT-S-ECC...CT.BTS-HHHHHHHHCTTEEEEE-TTTSEEEEEEEETTSSHHHH CS
  Ribosomal_L1  76 klkkkyksfeakrkllkefdlfladdrimpllpklLGkvfgkrkkmPipv.ltkgtvkedvkkevekalkstvvvrldkgtclsvkvGklsftaeel 171
                   klk+k ksfe+kr+l ++fdlfladdr++ +lpk+LGk+f++++k Pipv +++    +++kk+v +a++ ++++r+++ ++++++ G++  t++el
    EPX71523.1 119 KLKAKWKSFEQKRQLRDQFDLFLADDRVISMLPKVLGKTFYSKTKAPIPVrISS-DNADQLKKQVVSAYN-ATYFRASPCSSFMIRCGHTANTSQEL 213
                   **************************************************5443.45778**********.669999******************** PP

                   HHHHHHHHHHHHHT..STTTSGSEEEEEEEETTS- CS
  Ribosomal_L1 172 aeNieavvkalvek..vpkkwkniksiylkttmsp 204
                   aeNie++v++l ek  vp+++k i si++ktt+s+
    EPX71523.1 214 AENIESIVRYLCEKkvVPNGGKGISSIHVKTTQSM 248
                   **************9******************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (398 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2167  (0.120866); expected 358.6 (0.02)
Passed bias filter:                      537  (0.0299515); expected 358.6 (0.02)
Passed Vit filter:                       117  (0.00652574); expected 17.9 (0.001)
Passed Fwd filter:                        27  (0.00150594); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.98u 0.40s 00:00:01.38 Elapsed: 00:00:00.58
# Mc/sec: 2066.47
//
Query:       EPX71524.1  [L=1012]
Description: MutS protein 3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-64  218.1   0.0    1.7e-64  217.3   0.0    1.4  1  MutS_V    MutS domain V
      2e-37  129.3   0.1    5.5e-37  127.8   0.1    1.8  1  MutS_III  MutS domain III
    5.8e-28   97.4   0.1    1.4e-27   96.2   0.1    1.7  1  MutS_I    MutS domain I
    2.4e-13   50.5   1.6    6.2e-13   49.2   0.4    2.3  2  MutS_II   MutS domain II
     0.0002   21.7   0.0    0.00053   20.3   0.0    1.8  1  MutS_IV   MutS family domain IV


Domain annotation for each model (and alignments):
>> MutS_V  MutS domain V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  217.3   0.0   4.7e-68   1.7e-64       1     186 [.     767     959 ..     767     961 .. 0.96

  Alignments for each domain:
  == domain 1  score: 217.3 bits;  conditional E-value: 4.7e-68
                 EEEE-STTSSHHHHHHHHHHHHHHHHHT--BSSSEEEEE--SEEEEEE--------SS-HHHHHHHHHHHHHTT--TTSEEEEESTS-SS-HHHHHHHH CS
      MutS_V   1 llitGpnmaGkstylrqvalivllaqiGsfvpaekaeisivdkiftRvgasDdlakgkstFmvEmlEtasilknatekslvilDElGRGtstydGlaia 99 
                 llitGpnm+Gk + ++q al +l+aq G+fvpa++a+++++d+i+ R+g++D+++ + stFmvEm Et++il++at+kslvi+DElGRGtst dG ai+
  EPX71524.1 767 LLITGPNMGGKTSVVKQLALTSLMAQCGCFVPAKSARLPLFDSILVRLGSTDNIVLNMSTFMVEMYETNEILNKATDKSLVIFDELGRGTSTIDGEAIS 865
                 58************************************************************************************************* PP

                 HHHHHHHHHTT--EEEEEES-GGGGGHHHHST.TEEEEEEEEE......EETTEEEEEEEEEES--SS--HHHHHHHTT--HHHHHHHHHHHHH CS
      MutS_V 100 lavaeyllekikaktlfatHyheltklaekle.evknlhlavk......eeeedivflykvkegaaeksyGikvaklaglPesvverArevlke 186
                 +av+ yl+  ++ + lf tHy  l+ l+++++ +++++h+  +      +++++i flyk+ +g+a++syG++va++ag+P s++ rA+e+ +e
  EPX71524.1 866 YAVLYYLIYYVRPYLLFVTHYPGLSVLEKQFKqRLRSYHMGYVklggsdQNSQSISFLYKLVPGIASRSYGLNVARMAGIPISIIYRAEEMSEE 959
                 ***************************9996516999**98877889878889************************************98765 PP

>> MutS_III  MutS domain III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.8   0.1   1.5e-40   5.5e-37       1     191 []     408     716 ..     408     716 .. 0.75

  Alignments for each domain:
  == domain 1  score: 127.8 bits;  conditional E-value: 1.5e-40
                 HHHHHTTSSS-TTS.SSSS-HHHHH---SSHHHHHHHHHHHH--BS-HHHHHHHHHHHHHT.....TT.HHHHHHHHTT---HHHHHHHHHTT---HHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    MutS_III   1 aTlrnLeilenlrggskegsLlgvldrTvTamGaRlLrewllqPltdleeInaRldaVeele...neelreelrellrrlpDleRllsrislgkakard 96 
                 +Tl  Le++ n+++ s++gsL++vld+T T++G+RlL++w+++Pl++ +eI++RldaVeel+   ne+  + lr+ll+rlpDle+ l+ri+++++++++
  EPX71524.1 408 QTLDGLEVFANQTDHSSTGSLFWVLDHTYTRFGQRLLQQWIKAPLLSENEITNRLDAVEELSsgfNEN-TQFLRKLLHRLPDLEKGLARIYYQRCTPSE 505
                 799*****9995556889******************************************87444333.4555588999******************** PP

                 HHHHHHHHHHHHTTTTT---SSTHHHHH................................HHHH....HHHHHHB-SS--SSGGGS--B-T........ CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx................................xxxx....xxxxxxxxxxxxxxxxxxxxxxx........ RF
    MutS_III  97 lkallealkaleelvallekeklaesee................................esla....elleeaideeplalekegedlra........ 151
                 l+ +l+ + ++           ++   +                                +  +    e+ ++ +d+ ++    ++ed++         
  EPX71524.1 506 LLYILKGFYRVSTAFPSD---PND---SfqsfllrslikqlpsilspidhflslfnhekaA--EnnklEMFQN-VDDFDSIGDSSSEDSQSifkirehk 595
                 888666666433211111...111...1112233333322221211111111122222110..1112244444.4444444444444444488899999 PP

                 .................................................................................HHHHHHHHHHHHHHHHHH CS
                 .................................................................................xxxxxxxxxxxxxxxxxx RF
    MutS_III 152 .................................................................................iealeqelfqelleevee 169
                                                                                                  +   ++e++ ++l++++ 
  EPX71524.1 596 mgivmvetelsvhlqelrnylnyqelgyttwgnikfcielsrgcknipedwvrisatrsliryhtpkvqalmlelaqhkeaLAISCEEIYISFLKKISG 694
                 9***************************************************************************998875555699*********** PP

                 THHHHHHHHHHHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxx RF
    MutS_III 170 alerlrrlaealaeLDvllSlA 191
                 + ++lrr++ a+a LD+l+S+A
  EPX71524.1 695 YYNELRRVTVAVASLDCLHSFA 716
                 *********************9 PP

>> MutS_I  MutS domain I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.2   0.1   3.9e-31   1.4e-27       1     112 [.     105     217 ..     105     218 .. 0.93

  Alignments for each domain:
  == domain 1  score: 96.2 bits;  conditional E-value: 3.9e-31
                 HHHHHHHHCCCHH-TTCEEEEEETTEEEEECHHHHHHHHHCSSSSTT.ESSSSC.EEEEEEEHHHHHHHHHHHHHTT-EEEEEEE-S-HHHH......S CS
      MutS_I   1 tplmkqylelkkkykdavlffrvGdfYelfgeDAviaareleitltkrkkssekeipmagvPehalekylrkLvekgykVavveqtetpaek......k 93 
                 tpl++qy el+kkyk+++l ++vG++Y++f eDA+i++++l+i +       e+++  a++P+ +++ +l++L+++g kVav++qtet+  k      +
  EPX71524.1 105 TPLERQYIELRKKYKNCILAIEVGYKYRFFDEDAKIVSKTLGIGCY-----YEHNFLNASIPSYRIDFHLERLINAGLKVAVAKQTETAVFKstgntrN 198
                 8******************************************888.....45559********************************99998777765 PP

                 .S--EEEEEEEBTTC-TTS CS
      MutS_I  94 gvvkrevvrviTpGtltde 112
                  +++r+vv ++T+Gtl+ e
  EPX71524.1 199 TLFQRDVVGMYTKGTLIRE 217
                 6**************9976 PP

>> MutS_II  MutS domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.2   0.4   1.7e-16   6.2e-13       3     130 ..     236     385 ..     234     392 .. 0.75
   2 ?   -1.9   0.0         1   3.6e+03      62     111 ..     555     606 ..     540     620 .. 0.67

  Alignments for each domain:
  == domain 1  score: 49.2 bits;  conditional E-value: 1.7e-16
                 EEEEEEE.......TTTSEEEEEEEETTTTEEEEEEEEE...-HHHHHHHHHH-ESEEEEESS-SCCCH...HHHHHCHCTTT-EEEEESCCCCSHCCH CS
     MutS_II   3 laAisek.......regrrvGlafiDlstgefvvsefed...feeleaeLsrlsPkElllpedlsesta...eeessklrelrsrvgvretvefeseka 88 
                 +++ise+         + ++G+ + +ls+g+f +++fed   +++l+++Ls+l+P+E++ ++ ls++     ++++ +++ + ++v  +   +   + +
  EPX71524.1 236 ILCISESsiskkipSGKVQIGFLCTQLSSGTFIYDQFEDdilRSNLQTRLSHLQPCEIIFSDQLSSESIallNHYITTEQLIGRKVCIQYVDQHTPKLS 334
                 5664444444449555555*********************************************99977999999999999999988888888999999 PP

                 HHHCHHHB......--STTTTTTTGGG-HHHHHHHHHH...HHHCCCCCSC CS
     MutS_II  89 serleedf......svedldgfglekekklalaAlgal...isYleetqke 130
                  e+++ +f       ++ + +++le  k l   +  +l   isYl e+++e
  EPX71524.1 335 LENVCNFFssnfydYEQVIVDLHLERIKSLPTLSMVCLemtISYLTEFSLE 385
                 *****9995533333344444444333333333333446668899888887 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1
                 HHHHHCHCTTT-EEEEESCCCCSHCCHHHHCHHHB--STTTTTTT...GGG-H CS
     MutS_II  62 eeessklrelrsrvgvretvefesekaserleedfsvedldgfgl...ekekk 111
                 ++e  ++ ++ +  ++++++++ ++++se+ +  f++++ +++g+   e+e+ 
  EPX71524.1 555 NHEKAAENNKLEMFQNVDDFDSIGDSSSEDSQSIFKIRE-HKMGIvmvETELS 606
                 566666777777777888888888888888888888887.6666655544444 PP

>> MutS_IV  MutS family domain IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   1.5e-07   0.00053      16      91 ..     601     675 ..     590     676 .. 0.91

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 1.5e-07
                 HHHHHHHHHCCCCCCCT-TTBEECCCSSSEEEEEE-TCCCTTT--SEEEEEECTCEEEEECCCHHHHHHHHHHHHH CS
     MutS_IV  16 lekeleeleekereklgikslkveynkvlGyylevtrseakkvpkefirlqtlknseryttaelkkleaelleaee 91 
                 +e+el   ++++r+ l+ + l +   + + +++e++r + k++p++++r++ + + +ry t+++++l  el++++e
  EPX71524.1 601 VETELSVHLQELRNYLNYQELGYTTWGNIKFCIELSRGC-KNIPEDWVRISATRSLIRYHTPKVQALMLELAQHKE 675
                 57788888999999999999999999*************.***************************999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1012 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       749  (0.0417759); expected 358.6 (0.02)
Passed bias filter:                      547  (0.0305092); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.83u 0.32s 00:00:01.14 Elapsed: 00:00:00.52
# Mc/sec: 5882.52
//
Query:       EPX71525.1  [L=103]
Description: diphthamide biosynthesis protein Dph3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.6e-21   75.1   0.6      4e-21   74.5   0.6    1.3  1  zf-CSL       CSL zinc finger
      0.005   16.9   0.2     0.0084   16.2   0.2    1.3  1  Zn-ribbon_8  Zinc ribbon domain
  ------ inclusion threshold ------
      0.011   15.9   0.1       0.02   15.1   0.1    1.4  1  zf-RING_7    C4-type zinc ribbon domain


Domain annotation for each model (and alignments):
>> zf-CSL  CSL zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.5   0.6   6.7e-25     4e-21       1      59 []      28      82 ..      28      82 .. 0.98

  Alignments for each domain:
  == domain 1  score: 74.5 bits;  conditional E-value: 6.7e-25
                EEEEGGGSEEETTTTEEEEEETTSSEEEEEHHHHHTT....--EEEETTSSEEEEEE-- CS
      zf-CSL  1 develedfefdeeeesyyypCRCgdeFelteedleegaegaevvvqCssCSLwikVkfa 59
                de+eledf+fd++ + y+ pC+Cgd+Fe++++dl++g    e+v++C+sCSL+++V+++
  EPX71525.1 28 DEIELEDFTFDADFNLYTFPCPCGDRFEISLDDLRSG----EDVARCPSCSLIVRVIYD 82
                89***********************************....****************96 PP

>> Zn-ribbon_8  Zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.2   1.4e-06    0.0084       3      39 ..      43      79 ..      43      80 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.4e-06
  Zn-ribbon_8  3 iYeYrCeeCghefe.vlqsisdaplta.CPeCgsevrrv 39
                 +Y + C  Cg +fe  l      +++a CP+C s   rv
   EPX71525.1 43 LYTFPCP-CGDRFEiSLDDLRSGEDVArCPSC-SLIVRV 79
                 6999999.9*****85555556668888****.656665 PP

>> zf-RING_7  C4-type zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   0.1   3.3e-06      0.02      14      30 ..      58      74 ..      57      77 .. 0.89

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 3.3e-06
                HHHHCCSTB-EE-TTT- CS
   zf-RING_7 14 lselragdevvtCpeCG 30
                l +lr g++v++Cp+C+
  EPX71525.1 58 LDDLRSGEDVARCPSCS 74
                679*************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       498  (0.0277762); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.42
# Mc/sec: 728.10
//
Query:       EPX71526.1  [L=25]
Description: 60S ribosomal protein L41 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.9e-11   41.7  28.7    9.3e-11   41.6  28.7    1.0  1  Ribosomal_L41  Ribosomal protein L41


Domain annotation for each model (and alignments):
>> Ribosomal_L41  Ribosomal protein L41
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.6  28.7   5.2e-15   9.3e-11       1      25 []       1      25 []       1      25 [] 0.99

  Alignments for each domain:
  == domain 1  score: 41.6 bits;  conditional E-value: 5.2e-15
  Ribosomal_L41  1 MraKWrKKRmrRLKrKRRKmRqRSK 25
                   Mr+KWrKKR+rRLKr+RRKmR+RSK
     EPX71526.1  1 MRDKWRKKRVRRLKRRRRKMRARSK 25
                   ************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (25 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       767  (0.0427799); expected 358.6 (0.02)
Passed bias filter:                      218  (0.0121591); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.23s 00:00:00.57 Elapsed: 00:00:00.40
# Mc/sec: 187.32
//
Query:       EPX71527.1  [L=388]
Description: ribosome biogenesis protein Ltv1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.7e-96  321.8  26.4    1.1e-95  321.6  26.4    1.0  1  LTV       Low temperature viability protein


Domain annotation for each model (and alignments):
>> LTV  Low temperature viability protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  321.6  26.4  6.2e-100   1.1e-95       1     383 []       8     387 ..       8     387 .. 0.80

  Alignments for each domain:
  == domain 1  score: 321.6 bits;  conditional E-value: 6.2e-100
         LTV   1 dkkkAvtFqlvhRsqnDpliaDedApqhVLvpvekpnkkkkkkskklkdleselksekevrknegeaakyGiyFDDseYDYmqHLreigs.eavfveak 98 
                 dk kA+tF+lvhRsq+Dp++++e+A+++VLvp ++   kk+ ++ +++dl++e++   +vr+negeaa yGi+FDD+eYDYmqHLr +g+ +a++v+a+
  EPX71527.1   8 DKSKAQTFHLVHRSQRDPEYYNEEATERVLVPSDAL--KKTGRQLNRQDLDAEYGG--AVRSNEGEAAAYGIFFDDTEYDYMQHLRGMGNeNATWVAAP 102
                 899*******************************95..5777888999******99..7*******************************888888884 PP

         LTV  99 kkkkkkekgkkkkkkkledll.lllpssvlpsefeekvtlqdqqkvpdeiaGfqpDmDPrLRevleaLe.....deayvddeeeeedDiFaelakdgee 191
                 ++k + +k+k+  +  +++   + lp++vlps+ e k+++q+qq+vpd+iaGfqpDmDPrLRevle Le     +e++ d  e ++dD+F++l+++g+ 
  EPX71527.1 103 AAKGSGQKKKD--EVVIKEEEpSFLPEEVLPSKEEIKASYQNQQSVPDAIAGFQPDMDPRLREVLELLEhsdmeNEEETDG-EVNLDDEFNNLITSGK- 197
                 43333233333..23333322478********************************************9876655555555.777************7. PP

         LTV 192 vdeeefeeeeddewdsdatekadeqpkkedeeeeeedeenedweadfakfkkeekksr..ead.ddeeeseeqssvae........krkkkrkGAltdf 279
                 vde+ef+++   e +++++ ++          ++  ++ +++we +f+kfk e+kk+   + + d ++++e++++  +        +++k r++A+t++
  EPX71527.1 198 VDEDEFYQQ-PPEKEEEHEYDE----------QAALAAGKSEWEVEFEKFKLEQKKQPqaA-SsDGTFSDEDEEEERDevpelvstQKSKPRRKAKTAQ 284
                 7******65.222222222222..........223456899***************99632.3355555333333222355477666************ PP

         LTV 280 seySmtSSalaRteqltlLDdrFekleekYdddeeeeedeeeleeevdmksvvsersDfesilddflnnY.ek..egkkrkvlkkkeekkelkqladev 375
                 s+ Sm+SSal+R+e+l++LDdrF+k+ee+Y   + e+e  + +++ v++     + + f+++lddfl +Y ++  ++k   ++ k+++k +l++l d+v
  EPX71527.1 285 SSGSMSSSALFRNEGLSFLDDRFDKIEEEYVPMQHESELLDPEQKDVNDLI---NDNQFNNVLDDFLLSYgSNmgRKKAPSRMSKSKKKASLDEL-DNV 379
                 *******************************99999988888444444444...7899************5444534444567899999******.*** PP

         LTV 376 rkerrser 383
                 r+++ ++r
  EPX71527.1 380 RRQLSRAR 387
                 ***99887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (388 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1161  (0.0647554); expected 358.6 (0.02)
Passed bias filter:                      426  (0.0237604); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 2729.13
//
Query:       EPX71528.1  [L=611]
Description: GTP binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.4e-16   59.3   0.3    1.5e-14   54.1   0.1    2.4  2  MMR_HSR1     50S ribosome-binding GTPase
    2.6e-08   33.5   0.2      1e-05   25.1   0.1    2.3  2  FeoB_N       Ferrous iron transport protein B
    2.7e-05   24.2   0.6     0.0047   16.8   0.1    2.6  3  RsgA_GTPase  RsgA GTPase
     0.0012   18.9   3.4       0.11   12.5   0.6    3.1  3  Dynamin_N    Dynamin family
     0.0047   16.3   0.1      0.011   15.1   0.1    1.6  1  AIG1         AIG1 family
  ------ inclusion threshold ------
       0.05   12.9   0.0        1.9    7.8   0.0    2.5  2  DUF3388      Protein of unknown function (DUF3388)


Domain annotation for each model (and alignments):
>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0     0.039   1.2e+02      70     113 ..     165     209 ..     135     218 .. 0.66
   2 !   54.1   0.1     5e-18   1.5e-14       2      57 ..     298     351 ..     297     396 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.039
                 HHHHHCTSEEEEEEETT.....TTCSHHHHHHHHHHHHH..TTSEEEEEEE CS
    MMR_HSR1  70 flaleeadlillvvdas.....eeklkpldeeleellee..akkplilvln 113
                 ++ +e++d+++ +vda+     +        +le + +e   kk+ +l++n
  EPX71528.1 165 WRVIERSDVVVQIVDARnplffR------SANLEYYVKEvdPKKKNFLLVN 209
                 4446679********98444331......3344444333333344455555 PP

  == domain 2  score: 54.1 bits;  conditional E-value: 5e-18
                 EEEEESTTSSHHHHHHHHHTS.TEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCS CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltge.kaivsdkpgtTrdinegrvklkgkeielvDtpGli 57 
                 +++vG+pNvGKS+ inal+g  ++ vs++pg+T++ ++++++   ++++l+D+pGl+
  EPX71528.1 298 FGLVGYPNVGKSSTINALVGHkTVSVSSTPGKTKHFQTINLT---DKVTLLDCPGLV 351
                 689*****************9679*****************9...59********84 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.1   0.0    0.0024       7.2      76     123 ..     168     219 ..     149     229 .. 0.75
   2 !   25.1   0.1   3.4e-09     1e-05       2      57 ..     297     350 ..     296     372 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0024
                 CTSSSEEEEEEEGGGH....HHHHHHHHHHHHTTSSEEEEEETHHHHHHTTE CS
      FeoB_N  76 eeepdvvvnvvdatnl....ernLyLtlqllelgvpvvlalnmideaekkgi 123
                  e+ dvvv++vda n       nL   ++ ++ +++  l +n+ d +++++ 
  EPX71528.1 168 IERSDVVVQIVDARNPlffrSANLEYYVKEVDPKKKNFLLVNKADMLTAEQR 219
                 4789**********953322345555666666679999999*9999887765 PP

  == domain 2  score: 25.1 bits;  conditional E-value: 3.4e-09
                 EEEEEESTTSSHHHHHHHHHTTS.EEEEESTTSSSEEEEEEEEETTEEEEEEE---- CS
      FeoB_N   2 tvalvGnpnvGkttlfnaltgak.qkvgNwpGvtvekkegklklkgkeveivDlPGi 57 
                 t+ lvG pnvGk++ +nal g k  +v+  pG+t   ++ +l+   ++v+++D PG 
  EPX71528.1 297 TFGLVGYPNVGKSSTINALVGHKtVSVSSTPGKTKHFQTINLT---DKVTLLDCPGL 350
                 5679*****************88469********999999998...99********6 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.1   0.0    0.0066        20      47      85 ..     202     239 ..     154     254 .. 0.75
   2 !   16.8   0.1   1.6e-06    0.0047     103     161 ..     299     350 ..     284     356 .. 0.81
   3 ?   -4.1   0.0       4.4   1.3e+04     130     143 ..     530     543 ..     526     545 .. 0.75

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0066
                  -EEEEEEE-GGG--HHHHHHHHHHHHHHTTSEEEE--TT CS
  RsgA_GTPase  47 iepvivlnKiDlleeeeeleelkeelealgyevllvsak 85 
                   +  +++nK+D+l+ e+  + +++ +++ +++ l+ sa+
   EPX71528.1 202 KKNFLLVNKADMLTAEQ-RKYWAAYFNEHNISYLFFSAR 239
                  4567899**********.999999999999999999987 PP

  == domain 2  score: 16.8 bits;  conditional E-value: 1.6e-06
                  EEECSTTSSHHHHHHHHCTT-----S--------------SEEEEEETTTEEEESS-SS CS
  RsgA_GTPase 103 vlvGqSGvGKStLinallpelelktgevseklgrGkhTTtavellelaegglliDtPGf 161
                   lvG   vGKS+ inal+++   kt +vs+    Gk  T++ + ++l ++ +l D PG+
   EPX71528.1 299 GLVGYPNVGKSSTINALVGH---KTVSVSS--TPGK--TKHFQTINLTDKVTLLDCPGL 350
                  5899999************9...5555555..4555..78899999999*********8 PP

  == domain 3  score: -4.1 bits;  conditional E-value: 4.4
                  -------------S CS
  RsgA_GTPase 130 vseklgrGkhTTta 143
                  ++    +G++TT+a
   EPX71528.1 530 IQGPEYKGRNTTQA 543
                  6666789****986 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.7   0.0    0.0094        28     125     167 ..     167     211 ..     139     212 .. 0.87
   2 !   12.5   0.6   3.7e-05      0.11       3      30 ..     300     327 ..     299     343 .. 0.78
   3 ?   -0.1   0.1      0.28   8.4e+02      99     111 ..     338     350 ..     330     354 .. 0.86

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.0094
                 HHSTTEEEEEEEETTS..-CCC-CHHHHHHHHSTTBTTEEEEEE- CS
   Dynamin_N 125 yikkadiilavtsanh..dlsnsealflarevdpkgkrtivvltk 167
                  i+++d+++ +++a +   + +++ +   +evdpk+k+++ v+++
  EPX71528.1 167 VIERSDVVVQIVDARNplFFRSANLEYYVKEVDPKKKNFLLVNKA 211
                 6899**********99433566699999**************976 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 3.7e-05
                 EEEBTTTTHHHHHHHHHTS--S---SSS CS
   Dynamin_N   3 vvGsqSsGKSSvlnaLlgedilprgpnp 30 
                 +vG  + GKSS +naL+g++   ++++p
  EPX71528.1 300 LVGYPNVGKSSTINALVGHKTVSVSSTP 327
                 6888999************998888876 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.28
                 TS-SEEEEE---B CS
   Dynamin_N  99 lvkgltlvDlPGl 111
                 l +++tl+D PGl
  EPX71528.1 338 LTDKVTLLDCPGL 350
                 5689********8 PP

>> AIG1  AIG1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.1   3.7e-06     0.011       5      60 ..     300     351 ..     296     376 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 3.7e-06
                 EESSTTSSHHHHHHHHHTS--SS--TTTS---SS-EEEEEEETTEEEEEEE--SCC CS
        AIG1   5 lvGktgnGkSaTgNsilgkkaFesklsaqsvtkkcqkksrtwdgkkinViDTPglf 60 
                 lvG   +GkS+T+N+++g+k  + + s+ + tk++q+        k+   D Pgl+
  EPX71528.1 300 LVGYPNVGKSSTINALVGHKTVSVS-STPGKTKHFQT---INLTDKVTLLDCPGLV 351
                 89******************98777.45555666555...5556789999***994 PP

>> DUF3388  Protein of unknown function (DUF3388)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.0   0.00062       1.9      38      73 ..     279     314 ..     261     336 .. 0.79
   2 ?    2.3   0.0     0.031        92       3      25 ..     489     511 ..     487     525 .. 0.80

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.00062
     DUF3388  38 lgllvdflaellkkeghkliGirGmPrvGktesiva 73 
                 lg++  +  ++ k +g+   G+ G P vGk+ +i a
  EPX71528.1 279 LGIFETYANNYAKDNGKLTFGLVGYPNVGKSSTINA 314
                 6777777888999999999***********998865 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.031
     DUF3388   3 klrkpklrdrlavrhGryiqrda 25 
                 kl+++ l d+la+r    i+++ 
  EPX71528.1 489 KLQNASLADKLALRESEEIDKEY 511
                 8999**************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (611 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       688  (0.0383736); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 4131.17
//
Query:       EPX71529.1  [L=89]
Description: Spo12 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      5e-12   45.5   0.8      5e-12   45.5   0.8    1.6  2  Spo12     Spo12 family


Domain annotation for each model (and alignments):
>> Spo12  Spo12 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0      0.67   1.2e+04      24      29 ..       8      13 ..       5      14 .. 0.58
   2 !   45.5   0.8   2.8e-16     5e-12       2      29 ..      47      73 ..      46      76 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 0.67
       Spo12 24 kakskP 29
                ++k+ P
  EPX71529.1  8 QKKGSP 13
                366666 PP

  == domain 2  score: 45.5 bits;  conditional E-value: 2.8e-16
       Spo12  2 SPTDnllSPCsqKLnahKsKlfkakskP 29
                SPTD+l+SPC++KL+ahK+K+  ++  P
  EPX71529.1 47 SPTDSLMSPCTAKLQAHKQKYH-TRNMP 73
                9*******************98.66555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       397  (0.0221429); expected 358.6 (0.02)
Passed bias filter:                      250  (0.0139439); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.28s 00:00:00.67 Elapsed: 00:00:00.44
# Mc/sec: 613.77
//
Query:       EPX71530.1  [L=620]
Description: UBA domain-containing protein Ucp6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-07   31.2   0.0    2.7e-07   30.4   0.0    1.4  1  UBA       UBA/TS-N domain
      0.004   16.9   0.0      0.014   15.2   0.0    1.9  2  UBA_4     UBA-like domain


Domain annotation for each model (and alignments):
>> UBA  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   0.0     3e-11   2.7e-07       3      37 .]       4      38 ..       3      38 .. 0.97

  Alignments for each domain:
  == domain 1  score: 30.4 bits;  conditional E-value: 3e-11
                HHHHHHHHHTTS-HHHHHHHHHHTTTSHHHHHHHH CS
         UBA  3 eeaiqrLveMGFdreevveALratgnNeErAveyL 37
                +e+i++L++MG ++ +++eAL +++n++E+A+ey+
  EPX71530.1  4 NEKIETLKSMGISEPDAREALTRCNNDVEAAAEYI 38
                799*******************************8 PP

>> UBA_4  UBA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   1.5e-06     0.014      12      37 ..      14      39 ..       5      42 .. 0.90
   2 ?   -3.1   0.0      0.81   7.3e+03      15      25 ..     184     194 ..     178     195 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.5e-06
       UBA_4 12 GadeekArqlLeannWdLerAislyF 37
                G++e  Ar+ L+++n+d+e+A++  F
  EPX71530.1 14 GISEPDAREALTRCNNDVEAAAEYIF 39
                899******************99888 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 0.81
       UBA_4  15 eekArqlLean 25 
                 +++A ++L+++
  EPX71530.1 184 TARALEFLRSS 194
                 689999**987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (620 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       651  (0.0363099); expected 358.6 (0.02)
Passed bias filter:                      501  (0.0279436); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.23s 00:00:00.82 Elapsed: 00:00:00.41
# Mc/sec: 4535.74
//
Query:       EPX71531.1  [L=1477]
Description: glutathione S-conjugate-exporting ATPase Abc2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      8e-91  304.5  45.5    1.3e-53  182.4   9.7    2.5  2  ABC_membrane  ABC transporter transmembrane region
    5.3e-49  166.2   0.4    4.5e-30  104.9   0.0    2.8  3  ABC_tran      ABC transporter
    8.4e-11   41.7   2.4     0.0058   16.1   0.1    4.2  4  SMC_N         RecF/RecN/SMC N terminal domain
    2.3e-05   24.4   2.7      0.039   14.0   0.1    3.1  3  MMR_HSR1      50S ribosome-binding GTPase
    3.4e-05   23.5   2.3       0.16   11.8   0.0    2.9  2  AAA_29        P-loop containing region of AAA domain
    3.8e-05   23.7   0.0       0.13   12.2   0.0    2.7  2  RsgA_GTPase   RsgA GTPase
    5.6e-05   23.7   0.1       0.14   12.6   0.0    2.4  2  AAA_23        AAA domain
    0.00028   21.3   0.1        0.7   10.3   0.0    2.6  2  AAA_16        AAA ATPase domain
     0.0034   17.3   0.8        5.7    6.6   0.0    3.2  3  AAA_21        AAA domain, putative AbiEii toxin, Type IV TA s
     0.0044   17.3   1.5        1.7    8.9   0.1    3.0  2  AAA_22        AAA domain
  ------ inclusion threshold ------
      0.015   15.0   0.0       0.74    9.5   0.0    2.3  2  AAA_15        AAA ATPase domain
      0.016   15.3   0.3       0.15   12.2   0.0    2.3  2  DUF87         Helicase HerA, central domain
      0.073   12.8   0.2         22    4.7   0.0    2.9  2  AAA_30        AAA domain
      0.086   12.9   0.4        2.5    8.1   0.1    2.4  2  Dynamin_N     Dynamin family
      0.097   11.7   0.0       0.36    9.9   0.0    1.9  2  T2SSE         Type II/IV secretion system protein
      0.098   12.4   0.0        7.3    6.3   0.0    3.0  3  IstB_IS21     IstB-like ATP binding protein
       0.14   11.3   0.2        8.6    5.5   0.1    2.6  2  NB-ARC        NB-ARC domain
       0.26   11.5   1.0         31    4.8   0.1    3.1  3  Roc           Ras of Complex, Roc, domain of DAPkinase
       0.35    9.6   1.7         11    4.7   0.1    2.7  3  ABC_ATPase    Predicted ATPase of the ABC class


Domain annotation for each model (and alignments):
>> ABC_membrane  ABC transporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.7  19.4   2.4e-42   2.2e-39       5     274 .]     272     545 ..     268     545 .. 0.91
   2 !  182.4   9.7   1.4e-56   1.3e-53       2     273 ..     918    1188 ..     917    1189 .. 0.96

  Alignments for each domain:
  == domain 1  score: 135.7 bits;  conditional E-value: 2.4e-42
                   HHHHHHHHHHHHHHHHHHHHHHHHHHSSTCCHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHH..HHHHHHHHHHHHHHHHHHHHCSTHHHHHHSC CS
  ABC_membrane   5 illailagvlsplfplvlgrildtlldkgdpet...ealnvysllllllglaqfilallqsyll..nvtgerlskrlrrklfkkilrqpmsffdtns 96 
                   +++++++++l++++p +++ri+ +++++++++    ++   ++l++++++   +++ llq+yl   +v+g+r++++l + +++k lr++ +  +++s
    EPX71531.1 272 VCFKFAQDILAFVQPNLIQRIILFVSSYKSSHPqpvAEG--LLLAMAMFFTSLCQTILLQQYLQmaMVLGMRWRSELITTIYRKALRLSSAARQSRS 366
                   6899************************99999755555..555555555555556677777777799***************************** PP

                   HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH CS
  ABC_membrane  97 vGellsrltndvsklrdglgeklglffqslltfvgglivmfylgwkltlvllailpliilvsaviakilkklkkkeqkavakassvaeEslsgirtV 193
                   vG++++ ++ d++k++d++ + +++++ ++++++++  ++ +lg + +l ++a+++l+++++++ia i+k++++ ++ + + +s++++E++++ir +
    EPX71531.1 367 VGDIVNYMSVDTQKVSDLTMFLFITVSGPFQIVLALGSLYRLLGLS-ALSGVAVTVLLLPCNVFIANIFKRFQNIQMHNKDARSRLMTEIINNIRSI 462
                   *********************************************8.9************************************************* PP

                   HHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT...SSTHHHHHHHHHHHHHHHHHH CS
  ABC_membrane 194 kafgreeyflekfekaleeakkagikkaianglligitqllgllsyalalwfGttlvisg...elsvgdlvvflslfailfgal 274
                   k++++e++f++k  + +++++ +++kk+ + + ++ +t+l++  +++ a++ +t+ ++ g   +l+v+ ++  l+lf++l+++l
    EPX71531.1 463 KLYAWENIFIQKLFNLRNSKELRMLKKIGYINTIGNFTWLFAPNLVSSATF-ATFVILYGesrTLTVDVVFSALTLFNLLQFPL 545
                   ***************************************999988888854.66666666566*****************9986 PP

  == domain 2  score: 182.4 bits;  conditional E-value: 1.4e-56
                    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHHHHCSTHHHHHHS CS
  ABC_membrane    2 iliillailagvlsplfplvlgrildtlldkgdpetealnvysllllllglaqfilallqsyll.nvtgerlskrlrrklfkkilrqpmsffdtn 95  
                     l+++++i + ++++ ++++l+++ ++ +  g +      +y+l+++l+gl+++ l+  +s ++  ++++r++k+l+  +++++lr+pmsff+t+
    EPX71531.1  918 ALYFFCIIGGIGMNVGTNVWLKHWSEVNTNAGYNPR--AYYYLLVYVLFGLLSCGLVSYSSLVItVHCAIRACKALHDAMIRSVLRAPMSFFETT 1010
                    689***************************999999..99999999999999976555555555499**************************** PP

                    CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTH CS
  ABC_membrane   96 svGellsrltndvsklrdglgeklglffqslltfvgglivmfylgwkltlvllailpliilvsaviakilkklkkkeqkavakassvaeEslsgi 190 
                    ++G++l+r+++dv ++++++++ l+ ff++l+++v +++v++y+ + + ++++++++l+ ++++++++++++lk+ ++ ++++++++++Esl g+
    EPX71531.1 1011 PTGRILNRFSSDVFRVDEVISRVLMSFFRNLFQIVFVVGVICYSAPPFLILIIPLFFLYRYSQVYYTRTSRELKRLDSVTRSPLYAHFQESLGGL 1105
                    *********************************************************************************************** PP

                    HHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSTHHHHHHHHHHHHHHHHH CS
  ABC_membrane  191 rtVkafgreeyflekfekaleeakkagikkaianglligitqllgllsyalalwfGttlvisgelsvgdlvvflslfailfga 273 
                     t++a+++ ++f+++ +  ++++++ ++ +  +n++++++ +++g ++++ a+++G+   i+g++++g +   ls++ +++++
    EPX71531.1 1106 STIRAYNMMDTFVSENDIRIDTNHRFWFLYFCSNRWQGIRVEVIGATVVFSAAFLGILSAIRGNPNSGLVGLSLSYAVLITQS 1188
                    *********************************************************************99999999988776 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.6   0.0   9.6e-19   9.1e-16       1     134 [.     614     746 ..     614     749 .. 0.91
   2 ?   -2.8   0.1       8.7   8.3e+03      19      35 ..     842     858 ..     829     893 .. 0.84
   3 !  104.9   0.0   4.8e-33   4.5e-30       1     137 []    1255    1403 ..    1255    1403 .. 0.97

  Alignments for each domain:
  == domain 1  score: 58.6 bits;  conditional E-value: 9.6e-19
                 EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH............HHHTCHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............xxxxxxxx RF
    ABC_tran   1 lknvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren............esdeeiek 87 
                 l+n++l+ ++ge++ ivG+ G GKS+Ll++ +g++ + +G++             +   ++++  q+p + + + ++en            e+++++  
  EPX71531.1 614 LQNINLQARKGELTCIVGRVGMGKSSLLEACLGNMYKLNGSV-------------FRCGSVAYAAQQPWILNAT-IQENilfglefdadfyEKTVHACC 698
                 79****************************************.............889*********9999999.*********998888877777777 PP

                 HHHHSTTGG.TTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEES CS
                 xxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  88 alsklglke.lkdtvvksspssLSgGqkqrvalarallkkpkllllDE 134
                 +++ +++    ++t v++++ sLSgGqk r++lara+ ++++++llD+
  EPX71531.1 699 LVRDFEIFAdGDQTEVGEKGISLSGGQKARISLARAVYSRADMYLLDD 746
                 78888776535678899999***************************8 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 8.7
                 STTSSHHHHHHHHTTSS CS
                 xxxxxxxxxxxxxxxxx RF
    ABC_tran  19 enGaGKStLlkllagll 35 
                 ++G+G St +k l++ +
  EPX71531.1 842 PSGSGYSTDVKSLSRSS 858
                 79999999999998876 PP

  == domain 3  score: 104.9 bits;  conditional E-value: 4.8e-33
                  EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH......HHHTCHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxx RF
    ABC_tran    1 lknvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren......esdeeiekalsk 91  
                  l+++++++k+ ek++ivG++GaGKStL  +l ++++pt G+i ld+ +++++ le lr++++++pqe+q f+++ +ren      +sd+ei +al++
  EPX71531.1 1255 LDDINVDVKPREKIGIVGRTGAGKSTLTLALFRMVEPTTGKIVLDDVNTSTIGLEDLRSRLAIIPQENQAFEGT-LRENldpkyiHSDAEIWEALES 1350
                  799**********************************************************************9.********************** PP

                  STTGG.......TTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                  xxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   92 lglke.......lkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137 
                   +lk+         ++ +++++++LS Gq+q ++l rall+  ++lllDE+ta
  EPX71531.1 1351 ASLKGyvtslenGLNSAITEGGANLSSGQRQLMCLTRALLTPTRVLLLDEATA 1403
                  *****99999997778888999*****************************96 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.2   0.0    0.0031       2.9      24      48 ..     624     645 ..     614     657 .. 0.83
   2 !   11.7   0.1   0.00014      0.13     136     187 ..     720     768 ..     646     799 .. 0.62
   3 ?    3.2   0.0     0.054        51      27      48 ..    1268    1288 ..    1256    1302 .. 0.82
   4 !   16.1   0.1   6.1e-06    0.0058     135     209 ..    1356    1443 ..    1295    1450 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0031
                 SSEEEEEESTTSSHHHHHHHHHHHC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  24 ksftaivGpNGSGKsnlldAilFvL 48 
                  ++t+ivG+ G GKs+ll+A    L
  EPX71531.1 624 GELTCIVGRVGMGKSSLLEAC---L 645
                 4689***************97...4 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 0.00014
                 CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HH.HHHHHHHHHHHHC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxx RF
       SMC_N 136 lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDek.nvkkvaellkeks 187
                 +LSgG+k+ ++la       +++a +yllD++ +a D++ n   + +ll ++ 
  EPX71531.1 720 SLSGGQKARISLA----RAVYSRADMYLLDDVLSAVDQHvNKDLIRNLLGSHG 768
                 8******977765....567999**************9724445556665543 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.054
                  EEEEESTTSSHHHHHHHHHHHC CS
                  xxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N   27 taivGpNGSGKsnlldAilFvL 48  
                    ivG+ G+GKs l+ A+ F +
  EPX71531.1 1268 IGIVGRTGAGKSTLTLAL-FRM 1288
                  569***********9999.766 PP

  == domain 4  score: 16.1 bits;  conditional E-value: 6.1e-06
                  T.................CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC-SCEE CS
                  x.................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  135 e.................lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemlekadklv 209 
                                    +LS G+++L+ l          p+ + llDe  aa D +  ++v + ++ k ++  ++ i++r +++ ++d+++
  EPX71531.1 1356 YvtslenglnsaiteggaNLSSGQRQLMCLTR----ALLTPTRVLLLDEATAAVDVETDAIVQRTIRDKFNDRTILTIAHRINTVMDSDRIL 1443
                  2555555555556666669********87653....3468999*******************************************999986 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   0.0    0.0012       1.1       3      22 ..     628     647 ..     626     672 .. 0.86
   2 ?   -2.4   0.1         5   4.7e+03      10      31 ..     845     866 ..     843     873 .. 0.87
   3 !   14.0   0.1   4.2e-05     0.039       1      22 [.    1267    1288 ..    1267    1313 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.0012
                 EEEESTTSSHHHHHHHHHTS CS
    MMR_HSR1   3 aivGrpNvGKStLinaltge 22 
                 +ivGr   GKS+L+ a +g+
  EPX71531.1 628 CIVGRVGMGKSSLLEACLGN 647
                 79*************99986 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 5
                 SSHHHHHHHHHTSTEEESSSTT CS
    MMR_HSR1  10 vGKStLinaltgekaivsdkpg 31 
                 +G St +++l+++ +ivs++p 
  EPX71531.1 845 SGYSTDVKSLSRSSSIVSNYPK 866
                 68899999************97 PP

  == domain 3  score: 14.0 bits;  conditional E-value: 4.2e-05
                  EEEEEESTTSSHHHHHHHHHTS CS
    MMR_HSR1    1 evaivGrpNvGKStLinaltge 22  
                  +++ivGr+ +GKStL  al++ 
  EPX71531.1 1267 KIGIVGRTGAGKSTLTLALFRM 1288
                  69***************99985 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.0   0.00041      0.38      21      42 ..     622     644 ..     613     651 .. 0.83
   2 !   11.8   0.0   0.00017      0.16      16      43 ..    1259    1286 ..    1254    1297 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00041
      AAA_29  21 lkg.atlltGpsGsGKSTllDAi 42 
                 +kg  t ++G+ G GKS+ll A 
  EPX71531.1 622 RKGeLTCIVGRVGMGKSSLLEAC 644
                 45679***************996 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 0.00017
      AAA_29   16 tieidlkgatlltGpsGsGKSTllDAiq 43  
                   +++++++ + ++G++G+GKSTl  A+ 
  EPX71531.1 1259 NVDVKPREKIGIVGRTGAGKSTLTLALF 1286
                  57788888899***********976665 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.0   0.00014      0.13      96     123 ..     620     648 ..     596     657 .. 0.76
   2 !    8.2   0.0    0.0022       2.1     100     130 ..    1266    1296 ..    1247    1302 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00014
                  HCTT.SEEEEECSTTSSHHHHHHHHCTT- CS
  RsgA_GTPase  96 llkd.ktsvlvGqSGvGKStLinallpel 123
                  + ++ +++++vG  G+GKS+L++a l+++
   EPX71531.1 620 QARKgELTCIVGRVGMGKSSLLEACLGNM 648
                  3344499***************9988875 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.0022
                   SEEEEECSTTSSHHHHHHHHCTT-----S-- CS
  RsgA_GTPase  100 ktsvlvGqSGvGKStLinallpelelktgev 130 
                   + + +vG +G+GKStL  al    e  tg++
   EPX71531.1 1266 EKIGIVGRTGAGKSTLTLALFRMVEPTTGKI 1296
                   455689**********999988888877776 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   0.0   0.00015      0.14      13      39 ..     615     644 ..     613     655 .. 0.85
   2 !    8.4   0.0     0.003       2.8      23      38 ..    1269    1284 ..    1256    1317 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00015
      AAA_23  13 qeidF...skgltlItGpNGaGKTTildAi 39 
                 q+i++   +  lt+I+G  G GK+++l+A+
  EPX71531.1 615 QNINLqarKGELTCIVGRVGMGKSSLLEAC 644
                 56777776668******************7 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.003
      AAA_23   23 lItGpNGaGKTTildA 38  
                   I+G +GaGK+T+  A
  EPX71531.1 1269 GIVGRTGAGKSTLTLA 1284
                  69**********8555 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.0   0.00074       0.7      12      48 ..     613     648 ..     606     687 .. 0.71
   2 !    8.0   0.1    0.0036       3.4      29     145 ..    1270    1402 ..    1260    1427 .. 0.52

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00074
      AAA_16  12 Llsale.rvrsgrpelvllsGesGvGKsslvrellral 48 
                 +l+ ++ ++r+g  el+ ++G  G+GKssl++++l  +
  EPX71531.1 613 VLQNINlQARKG--ELTCIVGRVGMGKSSLLEACLGNM 648
                 444444344444..8999*************9998544 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0036
      AAA_16   29 lsGesGvGKsslvrellralekdggiflrgkcdqlesaipysalaqalareellrqllde.aesaeleawrekleeala........avpelagaea 116 
                  ++G  G GKs+l  +l+r +e +     +gk +  + +++ + l ++ +r  ++ q++++ + +   + +++ +++ ++        +         
  EPX71531.1 1270 IVGRTGAGKSTLTLALFRMVEPT-----TGKIVLDDVNTSTIGLEDLRSRLAIIPQENQAfEGTLRENLDPKYIHSDAEiwealesaS--------L 1353
                  89***************755555.....555555533333333333333334444444443222222222222223322333332221........2 PP

      AAA_16  117 ........srllellkrllallsrder...........p.lvlvlDdlq 145 
                          + l+ ++++  a ls+++r           p  vl+lD++ 
  EPX71531.1 1354 kgyvtsleNGLNSAITEGGANLSSGQRqlmcltralltPtRVLLLDEAT 1402
                  2223233344444444444444444445555555555533777777765 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.012        12       1      18 [.     626     643 ..     626     648 .. 0.95
   2 !    6.6   0.0    0.0061       5.7       3      35 ..    1269    1295 ..    1268    1314 .. 0.81
   3 ?    0.9   0.0      0.33   3.1e+02     236     265 ..    1374    1400 ..    1319    1402 .. 0.79

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.012
      AAA_21   1 lnvliGpNgsGKSnLLda 18 
                 l++++G+ g GKS+LL+a
  EPX71531.1 626 LTCIVGRVGMGKSSLLEA 643
                 699*************98 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0061
      AAA_21    3 vliGpNgsGKSnLLdaldllarldrdvegltde 35  
                  +++G+ g+GKS+L  al      +r+ve++t +
  EPX71531.1 1269 GIVGRTGAGKSTLTLAL------FRMVEPTTGK 1295
                  69***************......6667766655 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.33
      AAA_21  236 elSdGtkrllalltallralkkgsllliDE 265 
                  +lS+G+++l +l  all      ++ll+DE
  EPX71531.1 1374 NLSSGQRQLMCLTRALLTPT---RVLLLDE 1400
                  46*******88888888644...9*****9 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.1     0.013        13       4      24 ..     623     643 ..     620     651 .. 0.86
   2 !    8.9   0.1    0.0018       1.7      10      71 ..    1270    1349 ..    1263    1435 .. 0.56

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.013
      AAA_22   4 tagilvvtGesGtGKTtllrr 24 
                 +  +++++G +G+GK+ ll+ 
  EPX71531.1 623 KGELTCIVGRVGMGKSSLLEA 643
                 567899***********9986 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0018
      AAA_22   10 vtGesGtGKTtllrrlleqldeeakaee.....erpevvfvtlpsstsskdllrellralglelka.................e 71  
                  ++G +G+GK+tl   l++  +      +      ++ + ++ l  + s+  +  +  +a++  l +                 e
  EPX71531.1 1270 IVGRTGAGKSTLTLALFRMVEP--T--TgkivlDDVNTSTIGLEDLRSRLAIIPQENQAFEGTLREnldpkyihsdaeiwealE 1349
                  89***************99831..1..122344333333333333333333333333333333333555554444444554441 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.0   0.00078      0.74      19      42 ..     617     643 ..     613     704 .. 0.77
   2 ?    3.0   0.0     0.072        68      16      66 ..    1257    1304 ..    1254    1363 .. 0.69

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00078
      AAA_15  19 idlsee...ltvliGkNnsGKSsilea 42 
                 i+l+     lt+++G+ + GKSs+lea
  EPX71531.1 617 INLQARkgeLTCIVGRVGMGKSSLLEA 643
                 444444557*****************9 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.072
      AAA_15   16 dveidlsee.ltvliGkNnsGKSsilealdlFlnnkekknkkvikiekedle 66  
                  d+ +d+++     ++G+ ++GKS+++ al  + + +      +i++++ +++
  EPX71531.1 1257 DINVDVKPReKIGIVGRTGAGKSTLTLALFRMVEPT----TGKIVLDDVNTS 1304
                  6666666666788***************98887766....344444444444 PP

>> DUF87  Helicase HerA, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1      0.68   6.4e+02      27      54 ..     628     654 ..     625     656 .. 0.81
   2 ?   12.2   0.0   0.00015      0.15      23      59 ..    1265    1299 ..    1250    1302 .. 0.74

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.68
       DUF87  27 AilgsTGsGKSntvavLleellekkgat 54 
                 +i+g+ G+GKS +    l +++ k +++
  EPX71531.1 628 CIVGRVGMGKSSLLEACLGNMY-KLNGS 654
                 799*********9988888887.66655 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 0.00015
       DUF87   23 trHlAilgsTGsGKSntvavLleellekkgatililD 59  
                  ++ ++i+g+TG+GKS+++  L++ ++ ++ +  ++lD
  EPX71531.1 1265 REKIGIVGRTGAGKSTLTLALFR-MV-EPTTGKIVLD 1299
                  4679************9888764.55.4555555554 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.023        22      17      60 ..     623     666 ..     615     720 .. 0.81
   2 ?    4.4   0.4     0.028        27      22      50 ..    1269    1297 ..    1262    1427 .. 0.57

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.023
      AAA_30  17 gdrvavltGpAGtGKttalkalreaweaaggrviglAptgkaAk 60 
                 +  +++++G+ G GK+ +l+a    + + +g+v+ + + + aA+
  EPX71531.1 623 KGELTCIVGRVGMGKSSLLEACLGNMYKLNGSVFRCGSVAYAAQ 666
                 44599***************996666666556666666666665 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.028
      AAA_30   22 vltGpAGtGKttalkalreaweaa.ggrvi 50  
                   ++G+ G+GK+t+  al +++e   g +++
  EPX71531.1 1269 GIVGRTGAGKSTLTLALFRMVEPTtG-KIV 1297
                  589*********99999888888845.333 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.1    0.0027       2.5       3      22 ..     629     648 ..     628     656 .. 0.86
   2 ?    2.1   0.0      0.18   1.7e+02       1      17 [.    1268    1284 ..    1268    1296 .. 0.87

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0027
                 EEEBTTTTHHHHHHHHHTS- CS
   Dynamin_N   3 vvGsqSsGKSSvlnaLlged 22 
                 +vG +  GKSS+l+a lg  
  EPX71531.1 629 IVGRVGMGKSSLLEACLGNM 648
                 89*************99976 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.18
                  EEEEEBTTTTHHHHHHH CS
   Dynamin_N    1 iavvGsqSsGKSSvlna 17  
                  i +vG + +GKS++  a
  EPX71531.1 1268 IGIVGRTGAGKSTLTLA 1284
                  789**********9655 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       1.8   1.7e+03     123     153 ..     618     648 ..     595     654 .. 0.70
   2 ?    9.9   0.0   0.00038      0.36     117     162 ..    1253    1298 ..    1181    1331 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 1.8
       T2SSE 123 rkavrerglilvsGgTgsGKttllyallkei 153
                 +   r+  l  + G  g GK+ ll a+l  +
  EPX71531.1 618 NLQARKGELTCIVGRVGMGKSSLLEACLGNM 648
                 333345556678899***********99876 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00038
       T2SSE  117 kiaevlrkavrerglilvsGgTgsGKttllyallkeinksderivt 162 
                   + + ++  v+ r  i + G Tg GK+tl+ al  +++ ++ +iv+
  EPX71531.1 1253 LVLDDINVDVKPREKIGIVGRTGAGKSTLTLALFRMVEPTTGKIVL 1298
                  55566777888999999*********************99999985 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0      0.14   1.3e+02      45      66 ..     622     643 ..     594     656 .. 0.70
   2 ?   -3.3   0.0       6.6   6.2e+03      13      48 ..     794     829 ..     786     832 .. 0.64
   3 ?    6.3   0.0    0.0077       7.3      45      67 ..    1263    1285 ..    1259    1321 .. 0.90

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.14
   IstB_IS21  45 ekkenivllGpsGvGKshlaia 66 
                 +k e  +++G  G+GKs l  a
  EPX71531.1 622 RKGELTCIVGRVGMGKSSLLEA 643
                 4567789**********98766 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 6.6
   IstB_IS21  13 lpaqktledidfraarsldkrkvkeLatlsfiekke 48 
                 l+ +k +e+  f++   +  +++ +L +++ +++++
  EPX71531.1 794 LRRGKIVESGSFAQLSTSPDAQLFQLLSDHSMTDSA 829
                 666777777777777666666666666655555554 PP

  == domain 3  score: 6.3 bits;  conditional E-value: 0.0077
   IstB_IS21   45 ekkenivllGpsGvGKshlaial 67  
                  + +e i ++G +G+GKs l+ al
  EPX71531.1 1263 KPREKIGIVGRTGAGKSTLTLAL 1285
                  5678999**************98 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0     0.057        54       5      45 ..     610     649 ..     607     687 .. 0.78
   2 ?    5.5   0.1    0.0092       8.6      23      43 ..    1268    1288 ..    1259    1296 .. 0.83

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.057
                 HHHHHHHHHCTTTSCSEEEEEEESTTSSHHHHHHHHCCSHC CS
      NB-ARC   5 vekviekLlekdelqslvvalvGmgGvGKttlakqilnksd 45 
                 v++v ++   +   +  +  +vG+ G+GK+ l++  l ++ 
  EPX71531.1 610 VDAVLQNINLQ-ARKGELTCIVGRVGMGKSSLLEACLGNMY 649
                 66666666533.33335779************988776655 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.0092
                  EEEEESTTSSHHHHHHHHCCS CS
      NB-ARC   23 valvGmgGvGKttlakqilnk 43  
                  +++vG+ G GK+tl    ++ 
  EPX71531.1 1268 IGIVGRTGAGKSTLTLALFRM 1288
                  89************9877765 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.063        60       3      24 ..     628     649 ..     627     664 .. 0.87
   2 ?    4.8   0.1     0.033        31       1      20 [.    1267    1286 ..    1267    1317 .. 0.76
   3 ?   -2.7   0.0         7   6.6e+03      15      37 ..    1412    1434 ..    1411    1440 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.063
                 EEESSTTSSHHHHHHCHCT-CC CS
         Roc   3 vlvGdsgvGKtsllkrfvedkf 24 
                 ++vG  g+GK+sll+  + + +
  EPX71531.1 628 CIVGRVGMGKSSLLEACLGNMY 649
                 79************99887765 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.033
                  EEEEESSTTSSHHHHHHCHC CS
         Roc    1 KvvlvGdsgvGKtsllkrfv 20  
                  K+ +vG +g+GK++l   + 
  EPX71531.1 1267 KIGIVGRTGAGKSTLTLALF 1286
                  899************98876 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 7
                  HHHCHCT-CCC-EEETTTTEEEE CS
         Roc   15 llkrfvedkfsekekstigvdfl 37  
                  +++r ++dkf++++  ti+  + 
  EPX71531.1 1412 IVQRTIRDKFNDRTILTIAHRIN 1434
                  899**********9999987664 PP

>> ABC_ATPase  Predicted ATPase of the ABC class
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.037        35     243     266 ..     622     646 ..     618     651 .. 0.84
   2 ?   -2.0   0.1       1.2   1.2e+03     249     265 ..    1270    1286 ..    1265    1290 .. 0.87
   3 ?    4.7   0.1     0.011        11     327     386 ..    1379    1439 ..    1334    1450 .. 0.72

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.037
                 -SS.EEEEEE-TTSSHHHHHHHHHH CS
  ABC_ATPase 243 pkG.vtlIvGggfhGKsTLLeAlek 266
                 +kG +t IvG+   GKs LLeA   
  EPX71531.1 622 RKGeLTCIVGRVGMGKSSLLEACLG 646
                 67779****************9755 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 1.2
                  EEE-TTSSHHHHHHHHH CS
  ABC_ATPase  249 IvGggfhGKsTLLeAle 265 
                  IvG+   GKsTL  Al 
  EPX71531.1 1270 IVGRTGAGKSTLTLALF 1286
                  99**********99985 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.011
                  HHHHHHHHHHHHTT-SEEEEEGGGS-HHHH---HHHHHHS-G..GG--B--HHHCHHHHHHH CS
  ABC_ATPase  327 tsqAanimealeagakllLiDEDtsAtNlmirDermqelvsk..ekepitplvdrvrelykk 386 
                    q + + +al   +++lL+DE t+A+     D+ +q+ + +  ++++i ++++r++ ++++
  EPX71531.1 1379 QRQLMCLTRALLTPTRVLLLDEATAAVDVET-DAIVQRTIRDkfNDRTILTIAHRINTVMDS 1439
                  45556678899999**************987.******997622467899999999888664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1477 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       750  (0.0418317); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              19  [number of targets reported over threshold]
# CPU time: 0.96u 0.30s 00:00:01.26 Elapsed: 00:00:00.48
# Mc/sec: 9204.93
//
Query:       EPX71532.1  [L=363]
Description: pheromone M-factor receptor Map3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-55  187.7  24.8    3.2e-55  187.4  24.8    1.1  1  STE3      Pheromone A receptor


Domain annotation for each model (and alignments):
>> STE3  Pheromone A receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  187.4  24.8   1.8e-59   3.2e-55       2     282 ..      11     278 ..      10     284 .. 0.90

  Alignments for each domain:
  == domain 1  score: 187.4 bits;  conditional E-value: 1.8e-59
        STE3   2 lsflafvlvliplpwhlrarnigalllilwllllnlisfvnaiiWsgnvvdkapv..wCDisskliiaasvglpaallcIvrrLykilslravllsske 98 
                 +++l++vl+  ++++++rarn+++lll++w+++++li++v+++iW+++ + k+    +CDi+s++i+ +s+g+paa++ +v +L k+++ +  l     
  EPX71532.1  11 YAYLSLVLSAQVFYMQMRARNLPCLLLLFWVCICTLIYAVQSAIWHQTSEPKWLGygFCDITSRIITCSSIGIPAAAFTLVLYLDKVIRSDRPLKP--- 106
                 6899*********************************************99999999********************************5555533... PP

        STE3  99 krrkliidlliclgiPllimalhyivqghRydIiediGCvpalyntwlalvlvliwpliislvaavyavltlrafikrrkqfkellsssnsglnksrfl 197
                   +++i+++l++l  P++ m+l+++++++Ry +i ++GC+pa+y+t+++l++++++p+++sl  +++++ +l+ +++r+k+++++++++ s+l+++rfl
  EPX71532.1 107 -FQDWIFQILLSLAYPIVTMLLMIPMESNRYVVICMNGCMPAFYQTVYTLIIFYLPPCLLSLGGLFFVSRILYYYWHRQKELQQFFQRD-SQLTSKRFL 203
                 .667************************************************************************************7.********* PP

        STE3 198 RLlalalliilltlplsiyllvsnltqsp.lqpwysweevhadfstilkvpasewkasskevsalelnrwilvvlailfflfFGfg 282
                 RLl+l ++++l +lpl+iyllv+n++  + +      +  h+ +s   +vp+  + a     +++ ln+wi++++ i++ +fF ++
  EPX71532.1 204 RLLLLDAVFFLGYLPLTIYLLVVNCKGHNfM------AVNHYLMSIWHRVPVYFFPA-----TSIFLNNWIPPTVLIIMSIFFITS 278
                 *************************887633......33455444444444443433.....56667****************776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (363 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       730  (0.0407162); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 2437.28
//
Query:       EPX71533.1  [L=260]
Description: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino]imidazole-4-carboxamide isomerase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.7e-38  131.3   0.0    4.5e-38  131.0   0.0    1.0  1  His_biosynth  Histidine biosynthesis protein
  ------ inclusion threshold ------
       0.07   12.5   0.0       0.13   11.7   0.0    1.4  1  Aldolase      KDPG and KHG aldolase


Domain annotation for each model (and alignments):
>> His_biosynth  Histidine biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.0   0.0   5.1e-42   4.5e-38       4     223 ..       9     236 ..       7     243 .. 0.92

  Alignments for each domain:
  == domain 1  score: 131.0 bits;  conditional E-value: 5.1e-42
                   EEEEEETTEEEEECTTCS......TCEEEETTSHHHHHHHHHHHT-SEEEEEEHHHHCTTHHHHHHHHHHHHHH-SSEEEEESSSSSHHHHHHHHHC CS
  His_biosynth   4 palDlkdGkvVrlvkGdr......fqelryagdpvelakryeeegadelhvvDldaakegreanldlveeiaeevfipvqvGGGIrsledveellea 94 
                   p++D+++G+v ++v G+       +++++  +++  +a+ y+e+++   hv++l    +++e+ +++++++       +q+GGGI++ + ++ +le 
    EPX71533.1   9 PCIDIHKGQVKQIVGGTLgdnaslQTNYVSLKSSDYYAQLYKENHLLGGHVIML--GPNCEETAKTALHAWPGY----LQIGGGINNTN-AKYWLEQ 98 
                   9***************99666766677777777777******************..789**************9....**********9.******* PP

                   T-SEEEESHHHH....H-THHHHHHHHHHCGGGEEEEEEEEE...CEEEEETTTTEEEEEEHHHHHHHHHHTT-SEEEEEETTTTTTSS---HHHHH CS
  His_biosynth  95 gadkviigtaav....knpelikelaekfgsqkivvaiDarr...gykvaikgwreetgldavelakkleelgageilltdidrdGtlsGpdleltk 184
                   ga+kvi++++ +     + e +k +++ +g++++vv + +rr   g+  ai++w+  t++++++   +l +  + e+l++  d +G + G+d el+k
    EPX71533.1  99 GASKVIVTSWLFpngqFDLERLKTISDLVGKDRLVVDVSCRRrenGWFAAINKWQTVTEFEISKDNLDLLSNYCTEFLIHAADVEGLCRGIDEELVK 195
                   **********77222255777*********************7655*************************************************** PP

                   HHHHHHSSEEEEESS--SHHHHHHHH..HTTCSEEEESHHH CS
  His_biosynth 185 elaeavkipviasGGvgsledlkelk..segvdavivgsal 223
                   +l e+v+ip++++GG +++edl+ ++  s+g+ ++ +gsal
    EPX71533.1 196 KLGEWVTIPTTYAGGGRNIEDLELVNtlSHGKVDLTIGSAL 236
                   ***********************9999999*********98 PP

>> Aldolase  KDPG and KHG aldolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.5e-05      0.13     155     193 ..      85     123 ..      80     126 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.5e-05
                 SS--TTTHHHHHTSTTBS-EEESCCC-HHHHHTT-HHHH CS
    Aldolase 155 GGispanvrdylalpsvlvvgGswlveaslikkedldki 193
                 GGi+ +n++ +l+ ++  v++ swl +   ++ e l+ i
  EPX71533.1  85 GGINNTNAKYWLEQGASKVIVTSWLFPNGQFDLERLKTI 123
                 9*************************9997766666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       428  (0.0238719); expected 358.6 (0.02)
Passed bias filter:                      405  (0.0225891); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.28s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 1773.67
//
Query:       EPX71534.1  [L=263]
Description: rRNA processing protein Faf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.8e-07   29.7  31.3    1.5e-05   25.3  31.3    2.2  1  DUF4602   Domain of unknown function (DUF4602)


Domain annotation for each model (and alignments):
>> DUF4602  Domain of unknown function (DUF4602)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3  31.3   8.6e-10   1.5e-05      25     130 ..     114     237 ..      14     239 .. 0.82

  Alignments for each domain:
  == domain 1  score: 25.3 bits;  conditional E-value: 8.6e-10
     DUF4602  25 k..........ksrkkkkaeeeeeenlrqefdLkkarkevhrf.gisglsk........kerkkaekerlikLGAKppknpyinykelkgekkkakare 104
                 +          ++  ++++ ++e+enl+++++L+k+++e+h++   s+ ++        k r+ka ++ + +LG+ ++k++++++  +kg+++k+k   
  EPX71534.1 114 RrnelrrrkssRDGEEDETPDNEAENLKNDVELQKLLRESHLLhEVSSRTGetnlvaqgKVRQKAIQQHIKELGG-KEKEQKMPMIARKGMAQKRKHID 211
                 03333222222788888888899********************5566666578888888****************.89********************* PP

     DUF4602 105 eeekaeareagvvtkkkkkkkkkkkr 130
                    ++eare+g v  kk k+ kk+k+
  EPX71534.1 212 GIIQKEARESGTVLAKKAKQPKKQKK 237
                 **************999955555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1845  (0.102906); expected 358.6 (0.02)
Passed bias filter:                      541  (0.0301746); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 1869.53
//
Query:       EPX71535.1  [L=102]
Description: hypothetical protein SOCG_01752 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-06   29.6   0.0    1.6e-06   29.4   0.0    1.3  1  RNR_inhib  Ribonucleotide reductase inhibitor


Domain annotation for each model (and alignments):
>> RNR_inhib  Ribonucleotide reductase inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4   0.0   8.9e-11   1.6e-06       1      47 [.      20      65 ..      20      97 .. 0.76

  Alignments for each domain:
  == domain 1  score: 29.4 bits;  conditional E-value: 8.9e-11
   RNR_inhib  1 sLlsVGmRVRKsVpeGYktgsvysafklwsdkstakksksstsssas 47
                sL++VG RVRK+V  GYk  +     ++++dk+++++  +++++++ 
  EPX71535.1 20 SLFDVGARVRKAVQTGYKFDQ-HLFPSYHQDKTDQTELPQQKHDPSL 65
                79*******************.5666777777777776666666544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      311  (0.0173462); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.27s 00:00:00.66 Elapsed: 00:00:00.43
# Mc/sec: 712.74
//
Query:       EPX71536.1  [L=172]
Description: palmitoyltransferase complex Erf4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.7e-26   91.2   0.0    6.7e-26   90.7   0.0    1.2  1  Erf4      Golgin subfamily A member 7/ERF4 family


Domain annotation for each model (and alignments):
>> Erf4  Golgin subfamily A member 7/ERF4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.7   0.0   3.7e-30   6.7e-26       2     115 ..       3     113 ..       2     114 .. 0.95

  Alignments for each domain:
  == domain 1  score: 90.7 bits;  conditional E-value: 3.7e-30
        Erf4   2 vripRdyst.gdlapqFstllppeLsgyiseeefeeiinkiNeilaeafspysvrnildnvlglltlylwslvlkthykkklkklekyieelNeelfke 99 
                 +ri+Rdys+ gd++pqFst +p  L++y+s ++++ +i+++N+ l  af p+++ n+ld++l+++tly ++ v+ + ++k+++++e+y+++      ++
  EPX71536.1   3 IRIERDYSVsGDRYPQFSTNFPLPLQPYVSVKDWNAFIHTLNKKLFMAFCPWTIGNLLDIFLSIVTLYASEFVFGSVHRKRIANIEAYVADFA----RQ 97 
                 9*****************************************************************************************965....45 PP

        Erf4 100 rglkiisprrsgylsl 115
                 ++l   s+r++g+l++
  EPX71536.1  98 HDLLAASLRNMGFLNI 113
                 6899999999999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       396  (0.0220871); expected 358.6 (0.02)
Passed bias filter:                      303  (0.0169); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.45
# Mc/sec: 1138.10
//
Query:       EPX71537.1  [L=458]
Description: initiator methionine tRNA 2'-O-ribosyl phosphate transferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.2e-96  322.0   0.0    4.4e-96  321.5   0.0    1.1  1  Rit1_C        Rit1 N-terminal domain
    5.5e-19   68.5   0.0    1.1e-18   67.5   0.0    1.5  1  Init_tRNA_PT  Rit1 DUSP-like domain


Domain annotation for each model (and alignments):
>> Rit1_C  Rit1 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  321.5   0.0    5e-100   4.4e-96       3     270 ..      18     276 ..      17     278 .. 0.94

  Alignments for each domain:
  == domain 1  score: 321.5 bits;  conditional E-value: 5e-100
      Rit1_C   3 rselsiknrLrSiaeDaeFveevaeaykklplvaNeRcGsWYvkpekkkasaYFkStdGHtgqwkfslrRlNlhllelieeekgiiivdsTrrGkrmPD 101
                 r ++si+nr+ Si +D++F++ v e+y++++ v NeRcG+WYvkp ++  saYFkStdGHtgqw+fs+rRlNlhll+li++ +gi++vdsTrrGkrmPD
  EPX71537.1  18 RMKRSIRNRFLSIVHDSQFIDLVLESYPNFKCVVNERCGTWYVKPVHAPFSAYFKSTDGHTGQWSFSTRRLNLHLLDLIHDYGGIVLVDSTRRGKRMPD 116
                 5689*********************************************************************************************** PP

      Rit1_C 102 alskTiPiWcavlnralleeeeeseeeselklatppevvsesekaqiearidefveklkelkldleklkaklkkplrplwitpesslleeeeeekeftp 200
                 alskT+PiW+a ln++++e+ + ++ e+++ ++  p +++e+e++++++++d fv+ l++++++l+ +++kl+kp+rplw+tp+s+l++++ e  ++++
  EPX71537.1 117 ALSKTVPIWIATLNKCVFERLRPHDLENRQLVF-FPPYLPETERSAMNKKLDGFVDLLMNSGINLDFISSKLQKPIRPLWATPTSTLSSAQFE--DYHT 212
                 *******************88876666665554.5666*********************************************9999998887..9*** PP

      Rit1_C 201 vilvtaSkreeelseakeklekeegfkYiqGaaDDeEnWaegLtpelfWknkeellsteeeeleelieel 270
                 v+lvtaSk      + ++  ++e+gf Y+qGaaDDeE+Wa+gL+p++fW++++++ls +eee ++ i+ l
  EPX71537.1 213 VVLVTASK------QVHDGYSREYGFLYVQGAADDEEEWASGLSPTVFWNHADNILSFPEEEYDSNIKCL 276
                 ********......45668899******************************************999876 PP

>> Init_tRNA_PT  Rit1 DUSP-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.5   0.0   1.3e-22   1.1e-18       2     110 .]     337     453 ..     336     453 .. 0.87

  Alignments for each domain:
  == domain 1  score: 67.5 bits;  conditional E-value: 1.3e-22
  Init_tRNA_PT   2 llelklgsgKkgsknLrtalpkivdfvrkrlsedkk..kkilvacetGkdlsvgvaLailcklfdda...kls....eeqsesnitKdlirkrLqwi 89 
                   +l+ +++sgKkg +++r++ pki++ ++      +   + il+  + Gk+++ + aL +l  ++d++     s      +s+++++K  ir+rL +i
    EPX71537.1 337 ELHCPIESGKKGAQSFRKEAPKILSKLNGIKPPWDVqdSLILLDDQGGKEIASCFALLLLSLYYDSDlrkL-StpltLGTSQTHLDKHQIRQRLIKI 432
                   799************************998776544546678888888****************8887650.25566678889************** PP

  Init_tRNA_PT  90 ieaspeanPsRatLksVnsfL 110
                   iea+p++nPsRa+L  Vn+ L
    EPX71537.1 433 IEAHPKTNPSRAFLIAVNTLL 453
                   ******************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (458 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       376  (0.0209716); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 3169.92
//
Query:       EPX71538.1  [L=792]
Description: Tre1 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.4e-25   87.4   0.1    2.3e-24   85.8   0.1    2.0  1  TFR_dimer      Transferrin receptor-like dimerisation domain
    2.2e-11   43.8   0.0    3.9e-11   43.0   0.0    1.4  1  Peptidase_M28  Peptidase family M28
      1e-06   28.6   0.0      2e-06   27.7   0.0    1.4  1  PA             PA domain
    0.00016   21.8   0.3     0.0096   16.1   0.0    2.5  2  Seryl_tRNA_N   Seryl-tRNA synthetase N-terminal domain
  ------ inclusion threshold ------
      0.064   12.8   0.2        6.7    6.3   0.0    2.5  2  PrpR_N         Propionate catabolism activator


Domain annotation for each model (and alignments):
>> TFR_dimer  Transferrin receptor-like dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.8   0.1   6.5e-28   2.3e-24       2     121 .]     669     790 ..     668     790 .. 0.90

  Alignments for each domain:
  == domain 1  score: 85.8 bits;  conditional E-value: 6.5e-28
   TFR_dimer   2 sldpLeeaikkfkkaaeefdkwadkwed.v..ggaessllavrkrrkiNdklmrferafldpeglpgrpwykHvvfgpslwtgyagatFPgirdaieeg 97 
                 s+d +++  +++ +++++f + +++w++ +  ++   + ++  ++   N kl+rfe +fld+ glp+ +w+kH+++gp++  g++g +FP+i da+ ++
  EPX71538.1 669 SYDLVKKEYEELVQTSKNFMAAISEWHSlMlhNSYFLTTKKHPELEGFNAKLARFENSFLDESGLPNHEWFKHLIYGPNRL-GKEGVVFPSIMDALLDN 766
                 677899999******************9735645555555555899*********************************99.9**************** PP

   TFR_dimer  98 dweeaqeqisivakaiesaaelLk 121
                 d++++q +i++ +kai++a + Lk
  EPX71538.1 767 DLDQVQGEINRFSKAIDRAHKALK 790
                 *******************99985 PP

>> Peptidase_M28  Peptidase family M28
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.0   0.0   1.1e-14   3.9e-11       1     164 [.     426     591 ..     426     628 .. 0.80

  Alignments for each domain:
  == domain 1  score: 43.0 bits;  conditional E-value: 1.1e-14
                    EEEEEESTTCESEEEEEEEE--B-TTTTCCT---TTTTHHHHHHHHHHHHHCHH.....GGCCSSEEEEEEEESSCSGSSHHHHHHHH..HHCCCT CS
  Peptidase_M28   1 NviatlegkatdevlllgAHyDsvgvgrgpifvGAdDnAsgvaalLelarvlaa.....sgsrpkrgvrflffdaEEagllGSkafak..akpelk 89 
                    N+++++ g+++d+vl++gA  Ds+         GA  +A+++a+l+ ++ ++ +     s  rp+r+++f+ +da  +  +GS+ +++  +++ + 
     EPX71538.1 426 NILGQITGREPDQVLIIGAPRDSWCG-------GASESAVSTALLMDIVFTFSDmaknlSW-RPRRTIVFASWDAKQYNTIGSTEWVEhwKEWLQV 513
                    999**********************8.......9********************7777444.88***********************665555999 PP

                    TEEEEEEECS-SSSS--EEEHHHHHHCHHHHHHHHHHHHHTT-TTSCCEEEEESSTT-STTHHHHTTT.--EEEE.....C CS
  Peptidase_M28  90 kiaavlnlDmvgsggkellfesgdkssselekelkalakpvgraaaedpfdersgrgrsDhspflkag.vpvldl.....a 164
                    k +a+ln+D     g+ l +++ ++ ++ ++k ++  ++  +    ++++ +++ ++ sD++pfl++  vpv+ l     a
     EPX71538.1 514 KAVAYLNVDV-EVFGDVLTVNTVSGLKNVVQKAIQLMNEDNSLG-FPKINLNKF-DYISDATPFLAYAgVPVVELgfergA 591
                    *********8.555556665788887788877777666665554.456666655.778*******6555***999554441 PP

>> PA  PA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   0.0   5.7e-10     2e-06       2      58 ..     236     298 ..     235     315 .. 0.78

  Alignments for each domain:
  == domain 1  score: 27.7 bits;  conditional E-value: 5.7e-10
          PA   2 tgplVyscfagygisadfe.....gvdvkGkivLvqr...tfaeKarnAqaaGAagviivndge.l 58 
                 ++plV   +a++g+++df+     +v+++ ++vL ++   ++ + ++nA++ GA +v++++d   +
  EPX71538.1 236 EAPLV---YANQGAADDFQtldekNVQLNSSVVLLRSnrnNVSKAIENAERYGASAVLVFDDSYtD 298
                 69***...999999999999998899999******54556779999**************765421 PP

>> Seryl_tRNA_N  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   2.7e-06    0.0096      26      66 ..     245     285 ..     241     295 .. 0.89
   2 ?    3.1   0.0     0.031   1.1e+02      43      65 ..     766     788 ..     763     792 .] 0.86

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 2.7e-06
                   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCTT CS
  Seryl_tRNA_N  26 advdelleldekrrelqveleelqaerNelskeIgkakkkk 66 
                      d++  ldek  +l++ +  l+++rN++sk+I++a + +
    EPX71538.1 245 GAADDFQTLDEKNVQLNSSVVLLRSNRNNVSKAIENAERYG 285
                   5679999*****************************99877 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.031
                   HHHHHHHHHHHHHHHHCCCCCCT CS
  Seryl_tRNA_N  43 veleelqaerNelskeIgkakkk 65 
                   ++l+++q e N+ sk+I +a k+
    EPX71538.1 766 NDLDQVQGEINRFSKAIDRAHKA 788
                   6899*************999875 PP

>> PrpR_N  Propionate catabolism activator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.1    0.0096        34     136     159 ..     260     283 ..     255     288 .. 0.89
   2 ?    6.3   0.0    0.0019       6.7      49      74 ..     358     383 ..     352     385 .. 0.91

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.0096
      PrpR_N 136 aGlksvlltsgkesvrqAieeAle 159
                 ++  +vll+s +++v++Aie+A +
  EPX71538.1 260 LNSSVVLLRSNRNNVSKAIENAER 283
                 67789*****************86 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0019
      PrpR_N  49 PVveikvsgyDilralkqakklgeki 74 
                  Vv i+v++ D +  lk++k  ge+i
  EPX71538.1 358 KVVAIPVTYRDAMDLLKRLKGRGEQI 383
                 59********************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (792 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       701  (0.0390987); expected 358.6 (0.02)
Passed bias filter:                      586  (0.0326845); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.63u 0.31s 00:00:00.94 Elapsed: 00:00:00.41
# Mc/sec: 5807.78
//
Query:       EPX71539.1  [L=873]
Description: DUF221 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      8e-67  225.4  24.3      8e-67  225.4  24.3    2.2  3  RSN1_7TM  Calcium-dependent channel, 7TM region, putative pho
    1.3e-32  112.7   4.2    1.3e-32  112.7   4.2    2.5  3  RSN1_TM   Late exocytosis, associated with Golgi transport
    7.3e-25   88.2   0.0    1.5e-24   87.2   0.0    1.6  1  PHM7_cyt  Cytosolic domain of 10TM putative phosphate transpo


Domain annotation for each model (and alignments):
>> RSN1_7TM  Calcium-dependent channel, 7TM region, putative phosphate
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.2      0.24   1.4e+03     166     209 ..       9      52 ..       6      61 .. 0.83
   2 ?   -2.7   0.3      0.48   2.9e+03      13     117 ..     124     179 ..     116     207 .. 0.46
   3 !  225.4  24.3   1.3e-70     8e-67       2     273 ..     379     664 ..     378     665 .. 0.97

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.24
    RSN1_7TM 166 ilflikrkflsktprdlaerytkppsfdygteypkvllifvial 209
                 +++ i++++ ++  ++++++y+ + s+ +   ++++ll + ++l
  EPX71539.1   9 FWNQIQQTINNENSQEKFDKYSILVSLAFTCLFATLLLTLFVCL 52 
                 67788888888888889999999999999999999888888886 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.48
    RSN1_7TM  13 iifwiipvafvgllsnletltkvlpflkkilelskkllsvvtgllPtlllslllallpiilrllsklqGalsrse...lelsvvskyfaFlvvnvFlvf 108
                 +++ +ip+                                                      + s  +G +s+s+    +ls ++    ++v ++ l +
  EPX71539.1 124 CCVILIPI----------------------------------------------------NVIASDKSGSTSNSTnayAKLSFQNVSGKWTVAHIVLGY 170
                 33333333....................................................333334444444333111233334444444444444444 PP

    RSN1_7TM 109 tlagtalsl 117
                  + g++l++
  EPX71539.1 171 FMNGVVLTF 179
                 444444444 PP

  == domain 3  score: 225.4 bits;  conditional E-value: 1.3e-70
    RSN1_7TM   2 klivtlllvlliifwiipvafv.gllsnletltkvlpflkkilelskkllsvvtgllPtlllslllallpiilrllsklqGalsrselelsvvskyfaF 99 
                 +++++ll+++l+++wi  +a+   +++nl +l +v+p++++ l++++ ++svv+g+++++l+sll+ +l i+lr++s++qG l++s +e+ v++k+++ 
  EPX71539.1 379 RIMGNLLFIALLVAWIPENALFaIFIANLWNLGNVWPWFAHQLNVHSGFWSVVQGIISPALTSLLFTVLEIVLRRISSFQGSLTKSARERGVLNKLHVI 477
                 7899****************9989*************************************************************************** PP

    RSN1_7TM 100 lvvnvFlvftlagtalslleeiid...............nptsipkllaeslpkasnFfityillqglagaaleLlqlvklilflikrkflsktprdla 183
                 + + +F+++t++++++++++ ii                ++ + + +l ++    s+F+i+yi  + ++ + ++++q ++l++ +ik++f+s+tprd++
  EPX71539.1 478 FTFDNFIIYTVLSVIWRVIALIIAkteqkgnfaegltifKTSEPVPWLVTAFVGFSSFWIMYIAHS-FTSFLFQMAQPISLTIRIIKKRFFSPTPRDMF 575
                 ******************99999999999****99999988888888888888**********998.669***************************** PP

    RSN1_7TM 184 erytkppsfdygteypkvllifvialiYsviaPlilpfaliyfllgylvykyqllyvydtkyesgGklwpralnrllvglvlfqllligl 273
                 e +t+p++f y++ ++kvl++f++a++Y++++Pl+l+fal++f+ +y+ +ky+l+y+ +t++esgG++w+ ++nr+l+gl l++++l+++
  EPX71539.1 576 E-WTSPQKFIYSSSINKVLFFFTVAICYACVSPLVLLFALAAFCSNYMSQKYNLMYISETSAESGGRFWRPVVNRILFGLELANVILFLC 664
                 *.99***********************************************************************************986 PP

>> RSN1_TM  Late exocytosis, associated with Golgi transport
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.7   4.2   2.1e-36   1.3e-32       2     155 ..      31     182 ..      30     183 .. 0.93
   2 ?   -3.1   0.7      0.96   5.8e+03     134     152 ..     522     540 ..     478     543 .. 0.60
   3 ?   -3.2   0.2       1.1   6.5e+03      89      89 ..     605     605 ..     584     651 .. 0.60

  Alignments for each domain:
  == domain 1  score: 112.7 bits;  conditional E-value: 2.1e-36
     RSN1_TM   2 lltslvinlvlalvflllFlilRkknkrvYaprtylkgeeertpplpqkglfgWipallkisdeeilekaGLDayvflrflkmlikiflvlavlalivL 100
                 +l+sl++++++a+++l+lF++lR++++ vY+pr ++++++ + ppl+ ++lfgWi +l++++ e+ l  +G Da++fl f ++++ +f vla++++++L
  EPX71539.1  31 ILVSLAFTCLFATLLLTLFVCLRRTFRYVYSPREKYAKRDTSIPPLK-TSLFGWIEPLWSVRVEDCLYDIGADATIFLLFSRFCRDLFGVLALFCCVIL 128
                 89********************************9996666676666.*************************************************** PP

     RSN1_TM 101 lPvnatggegedskesk.sgldklsisnvsegsnrlwahvvvayiftglvlyllyr 155
                 +P+n+  +++++s++++ +   kls++nv +g ++ +ah+v+ y++ g+vl +l+r
  EPX71539.1 129 IPINVIASDKSGSTSNStNAYAKLSFQNV-SG-KWTVAHIVLGYFMNGVVLTFLFR 182
                 ****99999998888774666********.56.8*******************997 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 0.96
     RSN1_TM 134 rlwahvvvayiftglvlyl 152
                   w+ + ++ + +++++y+
  EPX71539.1 522 VPWLVTAFVGFSSFWIMYI 540
                 4577777777777777776 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 1.1
     RSN1_TM  89 f 89 
                 +
  EPX71539.1 605 V 605
                 1 PP

>> PHM7_cyt  Cytosolic domain of 10TM putative phosphate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.2   0.0   2.5e-28   1.5e-24       2     176 .]     207     367 ..     206     367 .. 0.88

  Alignments for each domain:
  == domain 1  score: 87.2 bits;  conditional E-value: 2.5e-28
    PHM7_cyt   2 rTvlvtgiPkelrseeklkeffeelypgkvvesvqivrdvkkldklveerekavrkleaalskykkngkklpkkrpthklgflglkligkkvdaidyyr 100
                 r++lv +iP++lrs ++l  +  +l+ ++     +i++ +++l++lv++ +kav  leaa +ky k++k+lp  rp h+++    +   +k+daidyy+
  EPX71539.1 207 RSLLVADIPSSLRSVKGLGAIAAHLKKSDTPIYYHICHAINNLPSLVKKYNKAVYGLEAAFAKYFKDPKQLPEVRPVHTVKHGL-F-NYEKIDAIDYYN 303
                 89************988888888888777755689*********************************************9654.3.47********** PP

    PHM7_cyt 101 ekleeldeeieeerekvkk.kplgaaFvtfesersaaavakqakcaaqiqqssnptlkpkkwtvelAPePrDviWeN 176
                 +k+e+   +++ +re+ ++ k  +++F t++s+   +++ak            n+  ++ +  +++ P+P+D +W+N
  EPX71539.1 304 SKIENYALRVNIARESLEEnKYEQYGFLTYNSSFTSHQIAK-----------TNS--RALGAAIHRCPQPEDMMWDN 367
                 ****************9662679*********999999952...........222..24689999**********99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (873 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       741  (0.0413297); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.28s 00:00:00.94 Elapsed: 00:00:00.43
# Mc/sec: 6041.86
//
Query:       EPX71540.1  [L=396]
Description: oxysterol binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.1e-59  201.3   5.1    7.6e-54  183.0   0.0    2.0  2  Oxysterol_BP   Oxysterol-binding protein
  ------ inclusion threshold ------
      0.037   14.3   0.0      0.065   13.5   0.0    1.4  1  Viral_Beta_CD  Viral Beta C/D like family


Domain annotation for each model (and alignments):
>> Oxysterol_BP  Oxysterol-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  183.0   0.0   8.5e-58   7.6e-54      10     275 ..      34     310 ..      26     320 .. 0.90
   2 !   19.4   3.3   4.1e-08   0.00037     314     360 ..     311     358 ..     308     377 .. 0.78

  Alignments for each domain:
  == domain 1  score: 183.0 bits;  conditional E-value: 8.5e-58
                   TT-BCCCS---GGGEEEEEHHHHHHHCCTTCHHHHHHHC.SSHHHHHHHHHHHHHHCCCGCT......STSSSEEE---TT-EEEEEETT..CEEEE CS
  Oxysterol_BP  10 iGkDLskislPvffneplSlLqrlaedleyselLdkaakeddsleRlayVaaFalSsyasti......krrlkKPFNPlLGEtfelvred..kgfrf 98 
                   +  DLs++s P f+++ +SlL+ ++ ++e++el+ ++++++++ +R+++V+++++++++ ++      +++ kKP+NP+LGE +  ++++   ++++
    EPX71540.1  34 FTGDLSTLSAPSFILSGTSLLEYMSYWFEFPELFVSIVDHEHPKDRMLAVLKWYMAGLSREYasrnksYGTEKKPLNPILGELYYGSWDSskGKVEL 130
                   678************************************999****************999999999999******************65557889* PP

                   EEEEEETTTTEEEEEEEE..CTEEEEEEEEEEEEE-SSEEEEEE-SEEEEEEEEESEEEEEEE--EEEEE-TTTTS-EEEEEEEEEEEETTT--EEE CS
  Oxysterol_BP  99 iaEQVsHhPpvsAfhaes..egweldgeikvkskflgkslevkpeGtahlellkksgehYtwtkpttivhniivgklwvelsgeveitnhstgdkak 193
                   +aEQVsHh pvsA  +++   g+++d +   +s f g+ + v++ G+++++l +k +e+Y +t p+++++++ + ++++el+g+++i+ +++++ +k
    EPX71540.1 131 VAEQVSHHGPVSAARVHCkeAGISVDTHNMYRSGFSGRTVYVNQIGQIRIHL-DKFNETYYLTLPNISLEGLWYMTPYIELYGSTYIV-STSNYITK 225
                   *************866655599******************************.77*********************************.6799**** PP

                   EEEE---SSS---SSEEEEEEEETTS-EEEEEEEETTTEEEEEETTSTTS--EEEEETT-....BSXXGCGSSTTBCCCCCCH--- CS
  Oxysterol_BP 194 leFkkkglfsskksnkvegkvkdkkkevlyeisGkwdeelyikkkktekkeeeedaseks....kvkekeeqeefeseklWkaspl 275
                   ++++ +g+f s+++n+++++v++k  ++ y  +G w+++ +++++k+++++   d  +        ++ +e  e e +++W + + 
    EPX71540.1 226 IDYSGRGYF-SGTKNSFKATVYEKGANPDYVAEGVWTGTSKVTDTKSKTTSPFLDYGTMDaipiLPRPYSEVGEWETRHVWGKVSS 310
                   *********.599*****************************88888777777776665345678899999999999999988544 PP

  == domain 2  score: 19.4 bits;  conditional E-value: 4.1e-08
                   HHHTT-HHHHHHHHHHHHHHHHHHHHHHCCTT.----SSEEEEETTTT CS
  Oxysterol_BP 314 aleegdideAeeeKkrlEekQRerrkereekk.ewkpkwFekekdpdt 360
                   al ++ +d  + eK+ +E++QR++rk+++e++ ewk ++Fe + d+ +
    EPX71540.1 311 ALARNAYDIVSVEKSTVEQSQRDMRKREQEEGvEWKRRYFEWKPDESS 358
                   677889999*****************99555559******99887533 PP

>> Viral_Beta_CD  Viral Beta C/D like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   7.2e-06     0.065      11      73 ..     147     209 ..     137     254 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 7.2e-06
  Viral_Beta_CD  11 dCsselPssetkvilgsgtqaettpvektaaasvladnlddqyvlllaflfviaalllcvylk 73 
                    +C+    s++t+ ++ sg   +t+ v++  +  +  d++++ y+l l  +++  ++ +  y++
     EPX71540.1 147 HCKEAGISVDTHNMYRSGFSGRTVYVNQIGQIRIHLDKFNETYYLTLPNISLEGLWYMTPYIE 209
                    68877889*****************************************99999999888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (396 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       550  (0.0306766); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 2881.52
//
Query:       EPX71541.1  [L=96]
Description: ribosomal protein subunit S16 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-23   83.0   0.1    1.4e-23   82.7   0.1    1.1  1  Ribosomal_S16  Ribosomal protein S16


Domain annotation for each model (and alignments):
>> Ribosomal_S16  Ribosomal protein S16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.7   0.1   7.6e-28   1.4e-23       1      62 []       9      77 ..       9      77 .. 0.94

  Alignments for each domain:
  == domain 1  score: 82.7 bits;  conditional E-value: 7.6e-28
                   EESCTTCEEEEEEEEETTSSTTSSESEEEEEEETTTTSSTS.S.......EEE-HHHHHHHHHTTEEEE CS
  Ribosomal_S16  1 RfGrknrPfYrivvadsrkprdgrpiEklGtYdPlakkkekke.......velneerikyWlgvGAqpt 62
                   R+G +nrPfY+ivv+++ k+  ++p+E++Gt+dP++kk+++k        veln++r kyW++vGAqp+
     EPX71541.1  9 RHGVRNRPFYHIVVCNAWKAPRAKPLETIGTFDPIPKKEDPKDviprikdVELNVQRFKYWVSVGAQPS 77
                   9****************99999************9988887446899999******************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       290  (0.0161749); expected 358.6 (0.02)
Passed bias filter:                      274  (0.0152825); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.21s 00:00:00.53 Elapsed: 00:00:00.35
# Mc/sec: 825.40
//
Query:       EPX71542.1  [L=754]
Description: membrane-tethered transcription factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.5e-16   58.9   1.6    6.4e-16   58.1   1.6    1.5  1  HLH             Helix-loop-helix DNA-binding domain
     0.0031   17.9   0.9      0.024   15.0   0.3    2.3  2  ZapB            Cell division protein ZapB
  ------ inclusion threshold ------
      0.072   11.2   0.8       0.11   10.6   0.8    1.1  1  UPF0182         Uncharacterised protein family (UPF0182)
       0.21   11.7   3.3        4.4    7.5   1.2    2.4  2  Cep57_CLD_2     Centrosome localisation domain of PPC89
       0.41   11.6   5.2        4.4    8.3   5.2    2.4  1  PRKG1_interact  cGMP-dependent protein kinase interacting dom
       0.64   10.0   4.2        2.9    8.0   0.8    2.5  2  DUF2205         Short coiled-coil protein
       0.73   10.5   2.5        1.2    9.9   1.4    1.9  1  YabA            Initiation control protein YabA
        7.1    7.9   5.3        3.7    8.8   0.1    3.1  3  Basic           Myogenic Basic domain


Domain annotation for each model (and alignments):
>> HLH  Helix-loop-helix DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.1   1.6   2.8e-19   6.4e-16       1      53 []     411     483 ..     411     483 .. 0.93

  Alignments for each domain:
  == domain 1  score: 58.1 bits;  conditional E-value: 2.8e-19
                 HHHHHHHHHHHHHHHHHHHHHHHHHCST....................CSTTSS-STHHHHHHHHHHHHHHHH CS
         HLH   1 rraahnerErrRRdriNsaleeLrellP....................slppskKlsKaeiLekAveYIkhLq 53 
                 ++++hn++E+++R ++N++++eLr  +P                     +++ +Kl+Ka++L kA+eYI+hL+
  EPX71542.1 411 KKNSHNIVEKKYRSNLNDKINELRNAIPslqslsskigsrsedgktvsFNTSIRKLNKATVLSKATEYIRHLR 483
                 689************************************999999887666777*****************95 PP

>> ZapB  Cell division protein ZapB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.41   9.2e+02      14      34 ..     424     444 ..     418     458 .. 0.71
   2 !   15.0   0.3   1.1e-05     0.024      14      50 ..     473     509 ..     470     521 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.41
        ZapB  14 qkaidtitlLqmeieeLkeen 34 
                 +++ d+i +L++ i  L+  +
  EPX71542.1 424 SNLNDKINELRNAIPSLQSLS 444
                 345588888888888887655 PP

  == domain 2  score: 15.0 bits;  conditional E-value: 1.1e-05
        ZapB  14 qkaidtitlLqmeieeLkeeneelkeenreleeeneq 50 
                 +ka + i++L+ e+ +L een+ l+++  e    ++q
  EPX71542.1 473 SKATEYIRHLRSENTRLVEENQHLQNRLSEYMMAVQQ 509
                 7999*********************998887755555 PP

>> UPF0182  Uncharacterised protein family (UPF0182)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.8   4.8e-05      0.11     130     208 ..     652     729 ..     640     738 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 4.8e-05
     UPF0182 130 kDisFYvFklPflelllslllalvllaliavllvyllsgeslgirl..kfaelskaarrhlsvllallllllalsywLdry 208
                 +  sF +F++P+l  +  +l ++++l++++++++++++++ ++  +    + + ++ r+++ +l  l++   + + w + y
  EPX71542.1 652 NPNSFSLFTVPILPSIFMTLRIFFILSACLCFVLHYVYNSKMN--SgkGLTLVYRRLRMEILFLSFLFF-SSSYRDWCNYY 729
                 5679**********************************96663..333445556666666665555444.44555555555 PP

>> Cep57_CLD_2  Centrosome localisation domain of PPC89
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.1     0.016        36      18      60 ..     411     453 ..     404     470 .. 0.73
   2 ?    7.5   1.2     0.002       4.4      37      64 ..     469     496 ..     426     501 .. 0.74

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.016
  Cep57_CLD_2  18 klqvheeelkrLnkERdsalrqLgvAyeelneLkaevealrkE 60 
                  k  +h +  k+ ++  +  ++ L++A++ l++L+++  ++ ++
   EPX71542.1 411 KKNSHNIVEKKYRSNLNDKINELRNAIPSLQSLSSKIGSRSED 453
                  4444555555555555556899**************9998876 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.002
  Cep57_CLD_2  37 lrqLgvAyeelneLkaevealrkELkeq 64 
                  ++ L+ A e ++ L++e+ +l +E+++ 
   EPX71542.1 469 ATVLSKATEYIRHLRSENTRLVEENQHL 496
                  456899999***************9996 PP

>> PRKG1_interact  cGMP-dependent protein kinase interacting domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   5.2     0.002       4.4      19      93 ..     425     496 ..     357     502 .. 0.72

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.002
  PRKG1_interact  19 eLeelekelselkseleklkqqrqe..svskrssllelekrerrslerkiseleeelkeleeLraenqrLkdEngAL 93 
                     +   l+ +++el++ + +l++ +++  s s+  ++++++ + r+ +  k++ l++  + +++Lr+en rL +En+ L
      EPX71542.1 425 N---LNDKINELRNAIPSLQSLSSKigSRSEDGKTVSFNTSIRKLN--KATVLSKATEYIRHLRSENTRLVEENQHL 496
                     2...333334444444443322222114445555555555555444..34446899999***************976 PP

>> DUF2205  Short coiled-coil protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.1     0.069   1.5e+02      10      41 ..     415     449 ..     406     461 .. 0.77
   2 ?    8.0   0.8    0.0013       2.9      32      65 ..     472     505 ..     460     516 .. 0.80

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.069
     DUF2205  10 veklerearerLqqqakeLqs...sLqaLaervde 41 
                  + +e+  r +L+ +++eL +   sLq+L+ ++ +
  EPX71542.1 415 HNIVEKKYRSNLNDKINELRNaipSLQSLSSKIGS 449
                 45578899***********9866689999999865 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0013
     DUF2205  32 LqaLaervdeVkeehdKLesenrfLqqYIgdLms 65 
                 L +  e + + ++e+ +L  en+ Lq+  ++ m 
  EPX71542.1 472 LSKATEYIRHLRSENTRLVEENQHLQNRLSEYMM 505
                 55667788999***************98877654 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   1.4   0.00052       1.2      23      64 ..     471     512 ..     454     533 .. 0.67

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00052
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHXXXXXXXXXXXX CS
        YabA  23 eleelkeelaelleenaeLeleneklrerleeeekkekekkk 64 
                  l++  e + +l  en++L  en++l++rl+e   + +++ +
  EPX71542.1 471 VLSKATEYIRHLRSENTRLVEENQHLQNRLSEYMMAVQQSLS 512
                 356667788899999999999999999999544444433333 PP

>> Basic  Myogenic Basic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.1    0.0016       3.7       2      45 ..     257     298 ..     256     320 .. 0.59
   2 ?   -0.8   0.2       1.6   3.6e+03      17      37 ..     327     352 ..     312     391 .. 0.50
   3 ?   -1.8   0.1       3.2   7.2e+03      13      44 ..     486     516 ..     481     535 .. 0.52

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0016
       Basic   2 elyetncyffpdqrfledldnsrlqgldaallkereslslcaeg 45 
                 ++y +++ f+pd++f++d  +++l     + ++ ++  s +++g
  EPX71542.1 257 DIYSSPSVFSPDHHFVDDVSKGNLYMSSRQSTSTSQ--SEQPSG 298
                 7899*************9998777554433222111..222222 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 1.6
       Basic  17 ledldn....srlqgldaa.llkere 37 
                 ++d+dn    s l++++++  l++ +
  EPX71542.1 327 YNDGDNfipsSTLEKVKEEdYLNDVD 352
                 44555554443344443332111111 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 3.2
       Basic  13 dqrfledldn..srlqgldaallkereslslcae 44 
                 ++r +e++++  +rl+++ +a++++ +    +++
  EPX71542.1 486 NTRLVEENQHlqNRLSEYMMAVQQSLS---APSQ 516
                 455565555455566666554443333...2323 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (754 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       948  (0.0528752); expected 358.6 (0.02)
Passed bias filter:                      513  (0.0286129); expected 358.6 (0.02)
Passed Vit filter:                        68  (0.00379274); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.72u 0.28s 00:00:01.00 Elapsed: 00:00:00.45
# Mc/sec: 5003.26
//
Query:       EPX71543.1  [L=159]
Description: hypothetical protein SOCG_01760 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       618  (0.0344693); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 1169.60
//
Query:       EPX71544.1  [L=436]
Description: WD repeat protein Swd3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.4e-47  157.1   9.3    1.6e-09   38.2   0.1    6.6  6  WD40           WD domain, G-beta repeat
    2.3e-21   75.9   0.5     0.0015   18.8   0.0    6.1  6  ANAPC4_WD40    Anaphase-promoting complex subunit 4 WD40 doma
    5.2e-08   32.0   6.7       0.13   10.8   0.1    5.0  5  Nup160         Nucleoporin Nup120/160
    2.8e-07   29.8   0.3      0.019   14.0   0.0    4.0  5  Ge1_WD40       WD40 region of Ge1, enhancer of mRNA-decapping
    3.2e-05   23.9   0.1      0.071   13.0   0.0    3.8  4  eIF2A          Eukaryotic translation initiation factor eIF2A
    7.8e-05   22.1   0.2       0.14   11.5   0.0    3.3  4  Nbas_N         Neuroblastoma-amplified sequence, N terminal
    0.00061   18.6   2.4        1.5    7.5   0.0    4.0  4  Nucleoporin_N  Nup133 N terminal like
     0.0035   16.5   0.0         13    4.7   0.0    3.3  3  VID27          VID27 C-terminal WD40-like domain
     0.0049   16.2   0.0        0.6    9.4   0.0    2.8  3  WD40_like      WD40-like domain
  ------ inclusion threshold ------
      0.049   12.7   0.0        6.9    5.6   0.0    2.1  2  Coatomer_WDAD  Coatomer WD associated region


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.2   0.1   8.8e-13   1.6e-09       6      38 .]      44      77 ..      40      77 .. 0.95
   2 !   28.8   0.1   8.6e-10   1.5e-06       6      38 .]      86     119 ..      81     119 .. 0.88
   3 !   35.3   0.4   7.2e-12   1.3e-08       3      38 .]     125     161 ..     123     161 .. 0.93
   4 !   29.5   0.0   5.1e-10   9.1e-07       1      38 []     165     203 ..     165     203 .. 0.93
   5 !   13.2   0.0   7.2e-05      0.13       1      38 []     207     246 ..     207     246 .. 0.84
   6 !   11.9   0.0   0.00019      0.34      12      37 ..     328     356 ..     322     356 .. 0.77

  Alignments for each domain:
  == domain 1  score: 38.2 bits;  conditional E-value: 8.8e-13
                EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38
                tltGH ++vts+a+spd++w+a++s D t+++W+
  EPX71544.1 44 TLTGHtKGVTSIAVSPDKRWIATASADATIKLWN 77
                799**999*************************8 PP

  == domain 2  score: 28.8 bits;  conditional E-value: 8.6e-10
                 EEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   6 tltGHss.vtslafspdgawlasGsdDgtvriWd 38 
                 tl GH+  ++ +++ + g++las+sdD+tvriWd
  EPX71544.1  86 TLFGHNRgISEIRWASGGRYLASASDDKTVRIWD 119
                 556**445*************************9 PP

  == domain 3  score: 35.3 bits;  conditional E-value: 7.2e-12
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  +r l GH s+v+s++f+p g++l+sGs+D tvriW+
  EPX71544.1 125 SVRCLQGHtSFVSSVDFNPMGTLLVSGSWDETVRIWS 161
                 67899***888*************************5 PP

  == domain 4  score: 29.5 bits;  conditional E-value: 5.1e-10
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 g+c+r l +H  ++ s++ spdg++ as+s+Dg  riWd
  EPX71544.1 165 GRCIRMLPAHsEPIISVSISPDGTLCASASYDGMARIWD 203
                 68********66688***********************9 PP

  == domain 5  score: 13.2 bits;  conditional E-value: 7.2e-05
                 TEEEEEEESS..SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH..ssvtslafspdgawlasGsdDgtvriWd 38 
                 gqcl+tl      + +s++fsp+g++l+ +  +   r+Wd
  EPX71544.1 207 GQCLKTLVEPinVPLSSIKFSPNGQYLIVANLNSQMRLWD 246
                 6888888766533468***********99988*******9 PP

  == domain 6  score: 11.9 bits;  conditional E-value: 0.00019
                 S........EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  12 s........vtslafspdgawlasGsdDgtvriW 37 
                 +        vtsl     g++++s++ D+ vr+W
  EPX71544.1 328 DatnvsllqVTSL-----GPFIVSAGTDPYVRVW 356
                 3344555668999.....****99888******* PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.9   0.0    0.0086        15      36      68 ..      47      79 ..      39      87 .. 0.88
   2 !   14.6   0.0   1.7e-05     0.031      37      76 ..      90     129 ..      84     135 .. 0.88
   3 !   18.6   0.0   9.3e-07    0.0017      37      84 ..     132     178 ..     127     182 .. 0.89
   4 !   10.4   0.0   0.00034      0.62      38      76 ..     175     213 ..     172     218 .. 0.90
   5 !   18.8   0.0   8.3e-07    0.0015      41      89 ..     221     268 ..     215     270 .. 0.91
   6 ?    2.3   0.0      0.11     2e+02      52      84 ..     299     332 ..     292     342 .. 0.79

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0086
  ANAPC4_WD40 36 kedsevrsLaWkpdgklLavaysdgevrlldae 68
                 ++ + v+s+a +pd + +a a +d +++l + +
   EPX71544.1 47 GHTKGVTSIAVSPDKRWIATASADATIKLWNTS 79
                 56788***********************99876 PP

  == domain 2  score: 14.6 bits;  conditional E-value: 1.7e-05
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhsl 76 
                  +++ +++++W   g+ La a +d +vr+ d e+   v+ l
   EPX71544.1  90 HNRGISEIRWASGGRYLASASDDKTVRIWDTETRSSVRCL 129
                  567899**************************99887765 PP

  == domain 3  score: 18.6 bits;  conditional E-value: 9.3e-07
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekav 84 
                  + s v+s+ ++p g+lL+ +  d +vr+ +a++g++++ l+++se  +
   EPX71544.1 132 HTSFVSSVDFNPMGTLLVSGSWDETVRIWSAQDGRCIRMLPAHSEP-I 178
                  567799************************************9985.4 PP

  == domain 4  score: 10.4 bits;  conditional E-value: 0.00034
  ANAPC4_WD40  38 dsevrsLaWkpdgklLavaysdgevrlldaesgkvvhsl 76 
                  ++ + s++ +pdg+l a a  dg  r+ d+ sg+++++l
   EPX71544.1 175 SEPIISVSISPDGTLCASASYDGMARIWDVMSGQCLKTL 213
                  677889999*************************99875 PP

  == domain 5  score: 18.8 bits;  conditional E-value: 8.3e-07
  ANAPC4_WD40  41 vrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                   +s++++p+g+ L va  ++++rl d  s +vvh ++ ++++   +++W
   EPX71544.1 221 LSSIKFSPNGQYLIVANLNSQMRLWDYRSNRVVHLYDHHKNN-HFSMSW 268
                  5799*********************************99995.888888 PP

  == domain 6  score: 2.3 bits;  conditional E-value: 0.11
  ANAPC4_WD40  52 lLavaysdgevrlldaesgkvvhslsvksek.av 84 
                   L +  +dg+v + d +++ vv ++  +s+  +v
   EPX71544.1 299 YLLIPSEDGRVYITDPSTKAVVDNSIQHSDAtNV 332
                  5788899***************999888875433 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.1    0.0014       2.4     222     249 ..      54      80 ..      47      86 .. 0.82
   2 !   10.8   0.1   7.5e-05      0.13     228     255 ..      99     128 ..      92     140 .. 0.84
   3 ?    1.8   0.0     0.041        74     231     254 ..     146     169 ..     130     174 .. 0.85
   4 !    7.8   0.0   0.00063       1.1     223     255 ..     179     212 ..     169     218 .. 0.83
   5 !    4.7   0.1    0.0055       9.9     229     259 ..     229     259 ..     214     318 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0014
                 ET.....TTTEEEEEETT-EEEEEETTT CS
      Nup160 222 avavveigqtylfalsrdgkLrvWnllt 249
                 ++av+  ++  ++++s d ++++Wn++t
  EPX71544.1  54 SIAVSP-DKRWIATASADATIKLWNTST 80 
                 344444.99*****************99 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 7.5e-05
                 ...TTTEEEEEETT-EEEEEETTTTEEEEE CS
      Nup160 228 i..gqtylfalsrdgkLrvWnlltgkclat 255
                    g  yl+++s d+++r+W+++t + +++
  EPX71544.1  99 WasGGRYLASASDDKTVRIWDTETRSSVRC 128
                 3557789******************99987 PP

  == domain 3  score: 1.8 bits;  conditional E-value: 0.041
                 TEEEEEETT-EEEEEETTTTEEEE CS
      Nup160 231 tylfalsrdgkLrvWnlltgkcla 254
                 t+l++ s d ++r+W+ ++g+c++
  EPX71544.1 146 TLLVSGSWDETVRIWSAQDGRCIR 169
                 66777899**************87 PP

  == domain 4  score: 7.8 bits;  conditional E-value: 0.00063
                 T......TTTEEEEEETT-EEEEEETTTTEEEEE CS
      Nup160 223 vavvei.gqtylfalsrdgkLrvWnlltgkclat 255
                 ++v+ + + t+ +++s dg  r+W++ +g+cl t
  EPX71544.1 179 ISVSISpDGTLCASASYDGMARIWDVMSGQCLKT 212
                 4444335889999******************998 PP

  == domain 5  score: 4.7 bits;  conditional E-value: 0.0055
                 TTTEEEEEETT-EEEEEETTTTEEEEEEE-- CS
      Nup160 229 gqtylfalsrdgkLrvWnlltgkclatidll 259
                 + +yl ++ ++  +r+W++++++++   d  
  EPX71544.1 229 NGQYLIVANLNSQMRLWDYRSNRVVHLYDHH 259
                 56899*****************999776655 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0   0.00053      0.96     180     215 ..      41      77 ..      20      86 .. 0.77
   2 ?    1.3   0.0     0.072   1.3e+02     189     227 ..      93     129 ..      79     134 .. 0.79
   3 ?    0.8   0.0       0.1   1.9e+02     184     215 ..     129     161 ..     109     169 .. 0.77
   4 !   14.0   0.0     1e-05     0.019     186     217 ..     173     205 ..     161     227 .. 0.86
   5 ?   -1.9   0.0      0.69   1.2e+03     192     215 ..     223     246 ..     205     267 .. 0.72

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00053
    Ge1_WD40 180 gllkieehs.liveaafspdGtalatasedGevkffq 215
                  +  ++ h+  +++ a+spd   +atas+d ++k++ 
  EPX71544.1  41 EYCTLTGHTkGVTSIAVSPDKRWIATASADATIKLWN 77 
                 345567777479999*******************997 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.072
    Ge1_WD40 189 liveaafspdGtalatasedGevkffqvyledeeeprCL 227
                  i+e  +++ G  la as d +v+ +    e +++ rCL
  EPX71544.1  93 GISEIRWASGGRYLASASDDKTVRIWDT--ETRSSVRCL 129
                 5777788899999***********9985..445667777 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.1
    Ge1_WD40 184 ieehs.liveaafspdGtalatasedGevkffq 215
                 ++ h+  +++  f p Gt l   s d +v+ + 
  EPX71544.1 129 LQGHTsFVSSVDFNPMGTLLVSGSWDETVRIWS 161
                 4555438889999*************9999985 PP

  == domain 4  score: 14.0 bits;  conditional E-value: 1e-05
    Ge1_WD40 186 ehs.liveaafspdGtalatasedGevkffqvy 217
                  hs  i++ ++spdGt  a as dG+ + + v 
  EPX71544.1 173 AHSePIISVSISPDGTLCASASYDGMARIWDVM 205
                 455469999*********************996 PP

  == domain 5  score: -1.9 bits;  conditional E-value: 0.69
    Ge1_WD40 192 eaafspdGtalatasedGevkffq 215
                 +  fsp+G  l +a  + +++++ 
  EPX71544.1 223 SIKFSPNGQYLIVANLNSQMRLWD 246
                 456778888887777777777664 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.58     1e+03     146     169 ..      52      75 ..      40      92 .. 0.77
   2 !    6.3   0.0    0.0046       8.2      82     162 ..      70     152 ..      63     166 .. 0.69
   3 !   13.0   0.0     4e-05     0.071      75     168 ..     147     243 ..     139     256 .. 0.75
   4 ?    0.7   0.0      0.23   4.1e+02     136     175 ..     322     361 ..     306     365 .. 0.79

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.58
                 --EEEE-TTSSEEEEEE-TTT-SS CS
       eIF2A 146 atlvewspdgryvlTattaprlrv 169
                  t++  spd r+++Ta+    +++
  EPX71544.1  52 VTSIAVSPDKRWIATASADATIKL 75 
                 577888999999999987655554 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0046
                 SCEEEEEECS...CEEEEEEEEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE..-TT--EEEE-TTSSEEEEEE CS
       eIF2A  82 pakvslfdlk...vkviskleeqkrNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakae..aanatlvewspdgryvlTat 162
                 +a+++l+++    ++ +   +++    i + + g++++ a    +   + iwd+++++++  ++   +  ++v+++p g++++  +
  EPX71544.1  70 DATIKLWNTStfrLECTLFGHNRGISEIRWASGGRYLASASDDKT---VRIWDTETRSSVRCLQghTSFVSSVDFNPMGTLLVSGS 152
                 566666666332244444444555678999999999999988777...9******88888765411566789*******9988654 PP

  == domain 3  score: 13.0 bits;  conditional E-value: 4e-05
                 EEEESSSSCEEEEEECS.CEEEEEEEEE..S--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-TT...--EEEE-TTSSEEEEEE-TTT- CS
       eIF2A  75 aviyGkmpakvslfdlk.vkviskleeq..krNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakaeaan...atlvewspdgryvlTattaprl 167
                 +++ G  +++v +++ + ++ i +l ++  +  ++  sp g+l + a +  +     iwdv + ++++++ ++     +++++sp+g+y++ a    ++
  EPX71544.1 147 LLVSGSWDETVRIWSAQdGRCIRMLPAHsePIISVSISPDGTLCASASYDGM---ARIWDVMSGQCLKTLVEPInvpLSSIKFSPNGQYLIVANLNSQM 242
                 578999999999999966666666666500555677899****999998777...68888887777776665541116799*********999877666 PP

                 S CS
       eIF2A 168 r 168
                 r
  EPX71544.1 243 R 243
                 5 PP

  == domain 4  score: 0.7 bits;  conditional E-value: 0.23
                 EEEEEEE-TT--EEEE-TTSSEEEEEE-TTT-SSS-EEEE CS
       eIF2A 136 kkiakaeaanatlvewspdgryvlTattaprlrvdngfki 175
                 ++i++ +a+n +l++    g +++ a t p +rv    k+
  EPX71544.1 322 NSIQHSDATNVSLLQVTSLGPFIVSAGTDPYVRVWAPEKL 361
                 567888889999999999**************99665555 PP

>> Nbas_N  Neuroblastoma-amplified sequence, N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.5   0.0    0.0052       9.3     202     266 ..      22      86 ..      11      98 .. 0.84
   2 ?   -2.4   0.0       1.3   2.3e+03      49      72 ..      97     120 ..      89     150 .. 0.70
   3 !   11.5   0.0   7.8e-05      0.14     230     260 ..     176     206 ..     166     213 .. 0.89
   4 ?    0.5   0.0      0.17   3.1e+02     235     268 ..     224     257 ..     220     266 .. 0.82

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0052
      Nbas_N 202 ddvgalakkrgllkllslklysrkaeekdgvfkmslspdgtllavihfsgklsiwdipslkqrge 266
                 +dv+ + + +++     +  y   +    gv  +++spd   +a+      + +w+  +++++++
  EPX71544.1  22 EDVAHSKRDKNFHASDGFVEYCTLTGHTKGVTSIAVSPDKRWIATASADATIKLWNTSTFRLECT 86 
                 567766677778788889999999999******************************99998765 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.3
      Nbas_N  49 vawshdctllayaestgtvrvfdl 72 
                 + w+     la a    tvr++d 
  EPX71544.1  97 IRWASGGRYLASASDDKTVRIWDT 120
                 567777888888888888888886 PP

  == domain 3  score: 11.5 bits;  conditional E-value: 7.8e-05
      Nbas_N 230 dgvfkmslspdgtllavihfsgklsiwdips 260
                 + ++ +s+spdgtl a   + g   iwd+ s
  EPX71544.1 176 EPIISVSISPDGTLCASASYDGMARIWDVMS 206
                 568899**********************987 PP

  == domain 4  score: 0.5 bits;  conditional E-value: 0.17
      Nbas_N 235 mslspdgtllavihfsgklsiwdipslkqrgewe 268
                 + +sp+g  l v  +  ++ +wd  s +    ++
  EPX71544.1 224 IKFSPNGQYLIVANLNSQMRLWDYRSNRVVHLYD 257
                 5689*******************99987766555 PP

>> Nucleoporin_N  Nup133 N terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0   0.00085       1.5     202     231 ..      50      79 ..      44      90 .. 0.90
   2 !    4.7   0.1     0.006        11     202     243 ..      92     133 ..      86     160 .. 0.83
   3 ?    2.3   0.0     0.031        55     200     245 ..     174     219 ..     161     231 .. 0.86
   4 ?    0.3   0.1      0.12   2.2e+02      44      76 ..     239     266 ..     221     271 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.00085
                    G-EEEEEEECCTCEEEEEETTSEEEEEEEE CS
  Nucleoporin_N 202 eeivqlridssrrilytlsskgvirvydls 231
                    + ++++++++ +r++ t+s++ +i+ +++s
     EPX71544.1  50 KGVTSIAVSPDKRWIATASADATIKLWNTS 79 
                    7899************************98 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.006
                    G-EEEEEEECCTCEEEEEETTSEEEEEEEETTCEE-EEEEEE CS
  Nucleoporin_N 202 eeivqlridssrrilytlsskgvirvydlsasngesslksdi 243
                      i ++r  s  r l ++s ++++r++d++++++ + l +++
     EPX71544.1  92 RGISEIRWASGGRYLASASDDKTVRIWDTETRSSVRCLQGHT 133
                    567888888888******************998765555555 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.031
                    -GG-EEEEEEECCTCEEEEEETTSEEEEEEEETTCEE-EEEEEEEH CS
  Nucleoporin_N 200 ereeivqlridssrrilytlsskgvirvydlsasngesslksdidi 245
                     +e+i+++ i++   +  ++s +g  r++d+ + +  ++l+++i++
     EPX71544.1 174 HSEPIISVSISPDGTLCASASYDGMARIWDVMSGQCLKTLVEPINV 219
                    5899****************************55558888888776 PP

  == domain 4  score: 0.3 bits;  conditional E-value: 0.12
                    TTEEEEEETTSSSS...EEEEEE----S---EE CS
  Nucleoporin_N  44 dnklflWnYnstasspstdtipydgeehtilav 76 
                    ++   lW+Y+s++     +++ yd ++++++++
     EPX71544.1 239 NSQMRLWDYRSNR-----VVHLYDHHKNNHFSM 266
                    466679******8.....999999999998876 PP

>> VID27  VID27 C-terminal WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0     0.011        19     151     221 ..      54     125 ..      40     144 .. 0.78
   2 ?    4.0   0.0     0.012        21     164     201 ..     151     188 ..     132     193 .. 0.78
   3 !    4.7   0.0    0.0073        13     162     215 ..     191     246 ..     187     252 .. 0.81

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.011
       VID27 151 savattekGyiavasekGdirlfdrlginaktalPalgdpiigldvsadGrwvlatckty.llLiDalikeg 221
                 s + + +k  ia as    i+l+++   +   +l      i ++  ++ Gr++ +++++  + + D++ +++
  EPX71544.1  54 SIAVSPDKRWIATASADATIKLWNTSTFRLECTLFGHNRGISEIRWASGGRYLASASDDKtVRIWDTETRSS 125
                 4455678889******************************************98877654144557766654 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.012
       VID27 164 asekGdirlfdrlginaktalPalgdpiigldvsadGr 201
                 +s    +r++     +   +lPa ++pii +++s dG 
  EPX71544.1 151 GSWDETVRIWSAQDGRCIRMLPAHSEPIISVSISPDGT 188
                 4555668999999999999*****************97 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.0073
       VID27 162 avasekGdirlfdrl.ginaktalPalgdpiigldvsadGrwvl.atcktyllLiD 215
                 a as  G  r++d + g+  kt + ++  p+  ++ s +G++++ a  ++ + L D
  EPX71544.1 191 ASASYDGMARIWDVMsGQCLKTLVEPINVPLSSIKFSPNGQYLIvANLNSQMRLWD 246
                 779999*******9945667*********************965166666666666 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.81   1.5e+03      10      33 ..     101     124 ..      52     133 .. 0.60
   2 !    9.4   0.0   0.00034       0.6       4      65 ..     137     199 ..     134     216 .. 0.82
   3 ?    3.5   0.0     0.021        37       3      41 ..     221     259 ..     219     264 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.81
   WD40_like  10 kkgslilyGgkddkctvlklesle 33 
                   g +++  ++d+++++ ++e+  
  EPX71544.1 101 SGGRYLASASDDKTVRIWDTETRS 124
                 334455555555555555555555 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00034
   WD40_like   4 YsidiskkgslilyGgkddkctvlkleslesvsivesfedSvifvklldddlilv..vtlDGti 65 
                  s+d+++ g+l++ G+ d+++++ + + +  + ++   ++ +i v + + d  l+  ++ DG+ 
  EPX71544.1 137 SSVDFNPMGTLLVSGSWDETVRIWSAQDGRCIRMLPAHSEPIISVSI-SPDGTLCasASYDGMA 199
                 69*****************************************9875.5555555115678875 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.021
   WD40_like   3 iYsidiskkgslilyGgkddkctvlkleslesvsivesf 41 
                 + si +s++g+++++   + ++++ + +s+ +v + ++ 
  EPX71544.1 221 LSSIKFSPNGQYLIVANLNSQMRLWDYRSNRVVHLYDHH 259
                 56899*************************999988765 PP

>> Coatomer_WDAD  Coatomer WD associated region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0    0.0065        12      37     163 ..      54     194 ..      41     201 .. 0.66
   2 ?    5.6   0.0    0.0039       6.9     218     257 ..     223     261 ..     218     275 .. 0.87

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0065
                    XXXXXXXXXXXXX.XXXXXXXXXX....XXXXXXXXXXXX.XXXXXXXXXXXXXXXX.XXXXXX.XXXXXXXXXXXXXXXXXXXXXX.......XX CS
  Coatomer_WDAD  37 slshnpngrfvlV.cgdgeyiiyt....alalrnkaygkg.ldfvwvssnrfavles.sksvkifknfkekktksikleyqvdkifg.......Ga 118
                    s++ +p++r ++    d ++++ +     l+++      g ++  w+s +r+ +  s  k+v+i  + + ++ +  +l+  ++ + +       G+
     EPX71544.1  54 SIAVSPDKRWIATaSADATIKLWNtstfRLECTLFGHNRGiSEIRWASGGRYLASASdDKTVRI-WDTETRS-SVRCLQGHTSFV-SsvdfnpmGT 146
                    566666666666545555555555332222222222222214667999999766666699****.5555555.233444444444.3477899*** PP

                    XXXXXX.XX.XXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXX CS
  Coatomer_WDAD 119 lLgvks.egsvsfYDweqgklvrridvk..kvknVvwsddgelvalvs 163
                    lL+  s +++v ++  + g+ +r +  +  ++  V  s+dg+l+a +s
     EPX71544.1 147 LLVSGSwDETVRIWSAQDGRCIRMLPAHsePIISVSISPDGTLCASAS 194
                    **99873558**************9977436************99876 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.0039
                    XXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXX CS
  Coatomer_WDAD 218 rlkylvngevgiikhldktlyilgykgkenklylldkdgn 257
                     +k+  ng+  i+++l++++ +  y+  ++ ++l+d+  n
     EPX71544.1 223 SIKFSPNGQYLIVANLNSQMRLWDYRS-NRVVHLYDHHKN 261
                    69999*********************9.777889997765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (436 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       370  (0.020637); expected 358.6 (0.02)
Passed bias filter:                      295  (0.0164538); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.59u 0.30s 00:00:00.88 Elapsed: 00:00:00.47
# Mc/sec: 2775.99
//
Query:       EPX71545.1  [L=478]
Description: translocon alpha subunit Sec61 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      2e-63  214.5  10.6    2.6e-63  214.1  10.6    1.1  1  SecY             SecY translocase
    5.9e-17   61.2   0.2    2.5e-16   59.2   0.2    2.2  1  Plug_translocon  Plug domain of Sec61p


Domain annotation for each model (and alignments):
>> SecY  SecY translocase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  214.1  10.6   2.9e-67   2.6e-63       1     305 [.      76     457 ..      76     458 .. 0.82

  Alignments for each domain:
  == domain 1  score: 214.1 bits;  conditional E-value: 2.9e-67
                 BTTSSTCHHHHHHHHHHHHH.HHHSSSSSSTS-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC..........HH.HHHHHHHHHHHHHHHHHHHH CS
        SecY   1 sifaLGImPyitasIilqLl.tvvipkleelkkegeegrkkinqitryltvvlalvqalgialslg..........lalllivlqltagtvllmwLgEq 88 
                 ++++LGI+P++t+s+++qLl ++   +l e++ e +++r++++ ++++l++++a+ qa++++l+ g          +++ll++lql a+++++++L+E+
  EPX71545.1  76 TLMELGISPIVTSSMLIQLLvGS---QLIEVNMEVKSDRELYQLAQKFLAIIIAFGQATAYVLT-GmygrpqdlgaGICLLLILQLAAASLIVLLLDEL 170
                 89******************888...99999999**************************8854.45799******88********************* PP

                 HHH.HSSTTHHHHHHHHHHHHHHC.CHSS.................-HHHH..................SS..........THHHHHHHHHHHHHHHHH CS
        SecY  89 ite.kGiGnGisllifagivarlp.kals.................gliel..................ale........gilallllllvtllvillv 142
                 +++ +G+G+Gisl+i++  +++++ ka+s                 +   +                  + +        + l++l ++++tl+++ +v
  EPX71545.1 171 LQKgYGLGSGISLFIATINCESIFwKAFSpttyhiangvqfegaviN---FvyvmlkwdnklsalyqsfF-RtgltsshiQ-LPNLWNFFATLMIFGVV 264
                 *****************************877777777766655551...14444444544444444341.1455566544.7**************** PP

                 CHHHHBEEEECBBBSTT....S.S-EEEEETTCCCSCHHHHHHHHHH..................................H....HHCCCCS.TCCCS CS
        SecY 143 vyveeaerripvqyakrgrkggqssylPlklnyagviPiIfasslla..................................l....pstiaqfllalls 203
                 +y+++++++ip++++k    +g +s++P+kl+y+++ Pi+++s+l +                                       ps+++  l+   +
  EPX71545.1 265 IYLQDFRVEIPIRSQKF---RGFRSTFPIKLLYTSNTPIMLQSALTSnlflasrllfnrfsdnilvrllgvweqgavsglsYylspPSSLQDALI---D 357
                 **************975...599************************887777777666666655555444444433333303333444433222...3 PP

                 THHHHHHHHHHHHHH....HHHHHHTCT.THHHHHHHCCHHTBSSSCTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS.TT.TTHHHHHH CS
        SecY 204 psvlyvvlyvlliif....Fayfyteit.fnpkevaenlkksggfipgirpgketakyLekvlsritliGalflaliavlpdllgasligafggtslLi 297
                   ++++++yv ++++    F+++++e++ ++p++va++lk ++ ++ g+r+  ++ k+L++ +++++l+++++++++av +dllga  +g  +gt++L+
  EPX71545.1 358 --PIHTLVYVGFTMIacavFSKLWIEVSgSSPRDVAKQLKSQQLVMAGYRE-GSMYKELKRLVPTAALLSGACVGALAVASDLLGA--LG--SGTAVLL 449
                 ..35666666666555666*******************************8.6899******************************..87..9****** PP

                 HHHHHHHH CS
        SecY 298 vVgvalet 305
                 + ++++ +
  EPX71545.1 450 CTTTIYGY 457
                 **999977 PP

>> Plug_translocon  Plug domain of Sec61p
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.2   0.2   2.7e-20   2.5e-16       1      35 []      41      75 ..      41      75 .. 0.99

  Alignments for each domain:
  == domain 1  score: 59.2 bits;  conditional E-value: 2.7e-20
                     HHHHHHCCSB-TT--SSS-TCCHTTTCCCCTSSTT CS
  Plug_translocon  1 llYlvlsqiPLyGissssssDpfywlRaifAsnrG 35
                     l++lv+sq+PLyGi+ss++sDp+ wlR+i+A+nrG
       EPX71545.1 41 LIFLVMSQVPLYGIVSSDTSDPLLWLRMILAANRG 75
                     7*********************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (478 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       510  (0.0284455); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.29s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 3273.03
//
Query:       EPX71546.1  [L=363]
Description: GTP binding protein Gtp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.2e-41  138.5   0.2    1.6e-40  137.4   0.3    1.5  2  MMR_HSR1_Xtn  C-terminal region of MMR_HSR1 domain
    1.9e-22   79.1   0.0    3.9e-22   78.0   0.0    1.6  1  TGS           TGS domain
    4.5e-22   78.3   0.0    7.3e-22   77.6   0.0    1.3  1  MMR_HSR1      50S ribosome-binding GTPase
    5.7e-12   45.4   0.0      1e-11   44.6   0.0    1.4  1  FeoB_N        Ferrous iron transport protein B
    0.00032   20.8   0.2       0.12   12.4   0.0    2.3  2  Dynamin_N     Dynamin family
  ------ inclusion threshold ------
       0.11   12.8   0.0       0.24   11.7   0.0    1.6  1  DUF2004       Protein of unknown function (DUF2004)


Domain annotation for each model (and alignments):
>> MMR_HSR1_Xtn  C-terminal region of MMR_HSR1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.4   0.3   5.3e-44   1.6e-40       1     106 []     183     288 ..     183     288 .. 0.99
   2 ?   -3.5   0.0       3.6   1.1e+04      89     104 ..     310     325 ..     307     326 .. 0.78

  Alignments for each domain:
  == domain 1  score: 137.4 bits;  conditional E-value: 5.3e-44
  MMR_HSR1_Xtn   1 kgGikitstvkltkldeetvkkilkeykihnaevliredvtvDdlidviegnrvYipclyvlNKiDlisleeldelarepnsvviSaekelnldeLk 97 
                   +gGik+++tv+lt++d ++  +il+eyk+hna++lired+tvDd+idv++gnr Y++cly++ KiD++slee+d+lar p+svviS++ +lnld Lk
    EPX71546.1 183 NGGIKFNHTVPLTHMDYKMAFNILHEYKLHNADILIREDITVDDFIDVVMGNRRYLNCLYCYSKIDAVSLEEVDRLARLPKSVVISCNLKLNLDFLK 279
                   59*********************************************************************************************** PP

  MMR_HSR1_Xtn  98 ekiweeLnL 106
                   ++iweeL+L
    EPX71546.1 280 QRIWEELSL 288
                   *******87 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 3.6
  MMR_HSR1_Xtn  89 kelnldeLkekiweeL 104
                   k+ n++++ ++i ++L
    EPX71546.1 310 KGSNIEQVCNRIHRSL 325
                   6789999999998876 PP

>> TGS  TGS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.0   0.0   1.3e-25   3.9e-22       2      60 .]     290     362 ..     289     362 .. 0.99

  Alignments for each domain:
  == domain 1  score: 78.0 bits;  conditional E-value: 1.3e-25
                 EEEE.TTSSEEE......EETTB-HHHHHHHHSTTHHHHEEEEEECS.......EEEETTSBB-SSEEEEEEE CS
         TGS   2 rvyt.PdGkvpd......lprgatveDfAykIhrslakkfiyAlVnG.......qrvgldhvLedgdvveIvt 60 
                 r+yt ++G+vpd      +++g+ +e+++++Ihrsla++++yAlV+G       q+vgl+h +++gdvv+Ivt
  EPX71546.1 290 RIYTkRKGEVPDfsealiVRKGSNIEQVCNRIHRSLAEQLKYALVWGssakhspQLVGLNHLVQEGDVVTIVT 362
                 9***********************************************************************8 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.6   0.0   2.5e-25   7.3e-22       1     103 [.      64     164 ..      64     182 .. 0.83

  Alignments for each domain:
  == domain 1  score: 77.6 bits;  conditional E-value: 2.5e-25
                 EEEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEETTTTCSHHHHHHHHH CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseekglgkaflaleeadlillvvdaseeklkpldeelee 99 
                 +va++G p vGKStL++++t++++ ++++ +tT++ + g ++++g ei+++D+pG+iegas+++g ++a+ a + adlil+v+da+ +  ++++e++e 
  EPX71546.1  64 RVAFIGFPSVGKSTLLSSITKTRSATANYEFTTLTAIPGVLEYDGAEIQMLDLPGIIEGASQGRGGRQAVSAARTADLILMVLDAT-K-AADQREKIEY 160
                 69**********************************************************************9***********88.2.3444444443 PP

                 HHHH CS
    MMR_HSR1 100 llee 103
                  le+
  EPX71546.1 161 ELEQ 164
                 3332 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.6   0.0   3.4e-15     1e-11       2      90 ..      64     150 ..      63     167 .. 0.89

  Alignments for each domain:
  == domain 1  score: 44.6 bits;  conditional E-value: 3.4e-15
                 EEEEEESTTSSHHHHHHHHHTTSEEEEESTTSSSEEEEEEEEETTEEEEEEE----SSSSSSSHHHHHHHHHHHCTSSSEEEEEEEGGG CS
      FeoB_N   2 tvalvGnpnvGkttlfnaltgakqkvgNwpGvtvekkegklklkgkeveivDlPGiYslsayseeekvardflleeepdvvvnvvdatn 90 
                 +va++G p vGk+tl+ ++t++++  +N+  +t     g l+++g e++++DlPGi   +  s+     + + + +++d+++ v+dat+
  EPX71546.1  64 RVAFIGFPSVGKSTLLSSITKTRSATANYEFTTLTAIPGVLEYDGAEIQMLDLPGII--EGASQGRGGRQAVSAARTADLILMVLDATK 150
                 699****************************************************95..5666666666666678899*********97 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.2   0.2    0.0033        10       1      25 [.      65      89 ..      65     106 .. 0.79
   2 !   12.4   0.0   4.1e-05      0.12     101     147 ..     109     157 ..     102     178 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0033
                EEEEEBTTTTHHHHHHHHHTS--S- CS
   Dynamin_N  1 iavvGsqSsGKSSvlnaLlgedilp 25
                +a++G  S GKS++l ++++ +   
  EPX71546.1 65 VAFIGFPSVGKSTLLSSITKTRSAT 89
                7899*************99877554 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 4.1e-05
                 -SEEEEE---B-SSSGTTS..HHHHHHHSTTEEEEEEEETTS-CCC-CH CS
   Dynamin_N 101 kgltlvDlPGldsvnkrdq..elvkeyikkadiilavtsanhdlsnsea 147
                  ++ ++DlPG+++ + +    + + ++++ ad+il+v++a +++ + e+
  EPX71546.1 109 AEIQMLDLPGIIEGASQGRggRQAVSAARTADLILMVLDATKAADQREK 157
                 67899********999998899999999*************98876554 PP

>> DUF2004  Protein of unknown function (DUF2004)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   8.2e-05      0.24      57     106 .]     159     209 ..     141     209 .. 0.94

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 8.2e-05
                 HH.................HGGGGT-------.-EEE-SSS-S.-SHHHH- CS
     DUF2004  57 klkLvrigllpdeearfavldfklepdftdellvveldeegdv.qdvtwes 106
                 ++ L ++g+   + ++++++ +k+++ ++  + v  ++ ++++ + +++e+
  EPX71546.1 159 EYELEQVGVRLNKRKPDVTINYKKNGGIKFNHTVPLTHMDYKMaFNILHEY 209
                 6899*********************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (363 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       569  (0.0317363); expected 358.6 (0.02)
Passed bias filter:                      470  (0.0262145); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2580.98
//
Query:       EPX71547.1  [L=576]
Description: spindle pole body protein Cut12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-17   63.5   7.2    1.9e-17   63.5   7.2    3.1  3  Cut12     Spindle pole body formation-associated protein
  ------ inclusion threshold ------
        1.4    9.5   7.5        5.1    7.7   0.1    3.6  3  LLC1      Normal lung function maintenance, Low in Lung Cance


Domain annotation for each model (and alignments):
>> Cut12  Spindle pole body formation-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.4      0.28   2.5e+03      84      84 ..     147     147 ..      91     205 .. 0.64
   2 !   63.5   7.2   2.2e-21   1.9e-17      40     125 ..     257     346 ..     157     425 .. 0.80
   3 ?   -3.4   1.9      0.94   8.4e+03      85     116 ..     528     558 ..     518     573 .. 0.45

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.28
       Cut12  84 i 84 
                 +
  EPX71547.1 147 L 147
                 2 PP

  == domain 2  score: 63.5 bits;  conditional E-value: 2.2e-21
       Cut12  40 eee.kdeseeedeeDvTidLnePrSqSGkYWkseF...esyrsdaelEieklikyrslaksyakkKdeealrlkeklk...eEeekvaemekk 125
                 +++  ++ e  de D+Ti+L++P S+SGkYWk++F   e+++sd+e E++k+   r+++ +   +++ee++++k+++k   +E++++++ +++
  EPX71547.1 257 TSHlVNSTEIPDEVDYTINLDDPMSSSGKYWKQKFgllETAHSDLEEELSKI---RERVDAIMMERQEEISFWKRRCKlleAENDRISRLQRN 346
                 34445667778999**************************************...*********************98443488899877765 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 0.94
       Cut12  85 eklikyrslaksyakkKdeealrlkeklkeEe 116
                 + ++ y + ++     K +e +  ++kl +E+
  EPX71547.1 528 TEILPYEQELQPKTSSKATELT-AEQKLSKER 558
                 4444444444444444444432.234444333 PP

>> LLC1  Normal lung function maintenance, Low in Lung Cancer 1 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.4      0.52   4.7e+03       5      55 ..     166     217 ..     164     233 .. 0.67
   2 ?    7.7   0.1   0.00057       5.1      18      48 ..     283     313 ..     277     366 .. 0.84
   3 ?    4.3   0.2    0.0064        57      34     100 ..     494     570 ..     487     574 .. 0.67

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.52
        LLC1   5 deiwkdhvkaEleaakrWpekwgflttele.ellekekevekkekpkielpe 55 
                  e+++  +k+ ++ + r  + +g l ++ + ++  ++k++ ++++ k+  pe
  EPX71547.1 166 KEVHRFPLKHGKQEEARSVDGHGLLRDQGNlKFNMESKKTLHTTEAKMPKPE 217
                 5667777777777777777778888887776666666665566666666554 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.00057
        LLC1  18 aakrWpekwgfltteleellekekevekkek 48 
                 + k W++k+g l t+ ++l+e+ ++++++ +
  EPX71547.1 283 SGKYWKQKFGLLETAHSDLEEELSKIRERVD 313
                 5699******************999885433 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.0064
        LLC1  34 eellekekevekkekpk........ielpeklrirpvtpiekyikvkpsp.pvPkTtqgfiG.wrStqpqlnLeiyg 100
                 +el++++   +k++ ++        ++  +k++++ + p e++++ k+s+ +   T+++++   rS++ +++Le  +
  EPX71547.1 494 HELADRQLAHQKEPVNTdflrgapsMRNRQKFTLTEILPYEQELQPKTSSkATELTAEQKLSkERSAKARIRLEERR 570
                 5555555554433333334444443888899**************99887255566666665269999999999765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (576 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1004  (0.0559987); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.39
# Mc/sec: 4428.57
//
Query:       EPX71548.1  [L=81]
Description: hypothetical protein SOCG_01765 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.3e-07   29.6  44.7    0.00036   20.8  44.7    2.9  1  CYSTM     Cysteine-rich TM module stress tolerance


Domain annotation for each model (and alignments):
>> CYSTM  Cysteine-rich TM module stress tolerance
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8  44.7     2e-08   0.00036       1      42 []      44      81 .]       3      81 .] 0.92

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 2e-08
       CYSTM  1 ppqpgYyqqppvqeqppqkgdgG.clagClaALcCCclcdecf 42
                ++qp+Y+qq     +p+++g+gG +++g+la+L+CCc++d++f
  EPX71548.1 44 QQQPMYVQQ-----PPQNQGGGGdMCCGLLAGLACCCCLDALF 81
                799*****9.....5555555556*****************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       429  (0.0239277); expected 358.6 (0.02)
Passed bias filter:                      184  (0.0102627); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.26s 00:00:00.62 Elapsed: 00:00:00.41
# Mc/sec: 587.58
//
Query:       EPX71549.1  [L=420]
Description: replication licensing factor Cdt1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-13   50.3   0.5    2.5e-13   50.3   0.5    2.4  3  CDT1_C    DNA replication factor Cdt1 C-terminal domain
    3.9e-12   46.8   1.2    1.2e-11   45.3   0.1    2.2  2  CDT1      DNA replication factor CDT1 like


Domain annotation for each model (and alignments):
>> CDT1_C  DNA replication factor Cdt1 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1         1   9.4e+03      15      32 ..      38      54 ..      33      61 .. 0.58
   2 ?   -1.3   0.0      0.35   3.1e+03      20      46 ..     152     182 ..     143     196 .. 0.74
   3 !   50.3   0.5   2.8e-17   2.5e-13       1      95 [.     290     388 ..     290     389 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1
      CDT1_C 15 laamtreeelerrsallg 32
                 aa+t+++ l+r++a  +
  EPX71549.1 38 PAAPTSSPVLKRKAAH-Q 54
                4556666666666665.4 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.35
      CDT1_C  20 reeelerrsallgrlpdvarilrllf....v 46 
                 ++++++  sa  +r++++ r l ++f    +
  EPX71549.1 152 QPSSQKLSSANTSRIQEFHRRLVRYFeihpQ 182
                 5667777788888999999999999854432 PP

  == domain 3  score: 50.3 bits;  conditional E-value: 2.8e-17
      CDT1_C   1 sllerIraKearqalaa.mtreeelerrsallgrlpdvarilrllf...vae.kksalpmeevvkklkdSlrtpvskeeaekhlrlLaelaPdWvtivk 94 
                 sl++r+r+K++   +++ ++++++   ++   +   +++ri+ l+f    ++ +k++++m+e+v+ +++Sl+ ++s +e+ ++++lLa ++P W++i+ 
  EPX71549.1 290 SLFDRVRKKQKVVEAKKiEISKKDPVLQKLS-SEKVSLVRIIDLIFvqlSTWpSKRSFSMTELVSSIQKSLSCNTSSSECIDMVQLLASTLPSWCSIHY 387
                 79*********99977745555555555555.5666689999999988755569*******************************************97 PP

      CDT1_C  95 l 95 
                 l
  EPX71549.1 388 L 388
                 6 PP

>> CDT1  DNA replication factor CDT1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.3   0.1   1.3e-15   1.2e-11       8     128 ..      78     174 ..      75     184 .. 0.74
   2 ?   -2.1   0.1      0.44   3.9e+03      84      97 ..     251     278 ..     232     328 .. 0.52

  Alignments for each domain:
  == domain 1  score: 45.3 bits;  conditional E-value: 1.3e-15
        CDT1   8 LlelFkaldtivsmlenrketitfakvkkaVermsrksfeekhLaqiktvyPeayklkqekqlkefgssgkakaskyelviePnleddlkvsaseaetd 106
                 L+  F+ald + s+    + + tf+ ++++V ++++ sf+++hLaqi+t++Peay l+    ++++   ++++ ++y  +++P                
  EPX71549.1  78 LESFFSALDICWSFHISINTKPTFQILQPNVSSSIKLSFHLSHLAQILTIWPEAYRLR--PCISTY---QGHRVATY--ELQPSS-------------- 155
                 7889******************************************************..334444...33333344..455611.............. PP

        CDT1 107 krkklsaerlleRrkkFrrkLl 128
                   +kls++  ++R + F+r+L+
  EPX71549.1 156 --QKLSSA-NTSRIQEFHRRLV 174
                 ..123332.2355555555555 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.44
        CDT1  84 yelviePnleddl..............k 97 
                 +e  ++P+ ++++              k
  EPX71549.1 251 VESSVTPVASKSSlqlkshgtsgvvtkK 278
                 4444555443333444433333222221 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (420 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       814  (0.0454013); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.23s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3127.65
//
Query:       EPX71550.1  [L=494]
Description: U3 snoRNP protein Utp15 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.2e-43  146.9   0.0    5.4e-43  146.2   0.0    1.4  1  UTP15_C      UTP15 C terminal
    3.9e-21   75.0  12.0    4.7e-06   27.2   0.1    6.0  6  WD40         WD domain, G-beta repeat
    1.6e-09   37.9   1.0     0.0088   16.3   0.1    4.7  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain


Domain annotation for each model (and alignments):
>> UTP15_C  UTP15 C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  146.2   0.0   9.1e-47   5.4e-43       2     147 .]     350     492 ..     349     492 .. 0.99

  Alignments for each domain:
  == domain 1  score: 146.2 bits;  conditional E-value: 9.1e-47
     UTP15_C   2 ykgeeadivieekkkkklkkydklLrkfryskALdavlekkvekspevvvtlleeLrhRgalraALagrdeeslepiLkfllkhitdpryvsllvdvan 100
                 ykge++++ +ee ++k+l+++dk+L++f+y++ALd+ le+    sp  v+t+l eL h g+lr A+++rd+ sl+p+Lkfl k+i+dpr++++l+ van
  EPX71550.1 350 YKGENDEFYVEEVRRKRLRPFDKALKTFNYGDALDMSLEN---GSPILVITMLIELLHVGGLRLAISNRDDLSLSPLLKFLRKYIQDPRFTDVLTIVAN 445
                 79**************************************...67****************************************************** PP

     UTP15_C 101 vlldlyseklgqseeldelvkrLkrkvreevelakellelkGmlell 147
                 ++ld+y+  lg s  +++++++ ++kv++ev +++++ el Gml++l
  EPX71550.1 446 TVLDIYGIALGGSVMVESAISKFREKVEQEVVISQKANELVGMLNML 492
                 *********************************************98 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.1      0.39   2.3e+03      19      28 ..      90      99 ..      37     109 .. 0.56
   2 !   21.1   0.1   6.8e-08   0.00041       3      38 .]     115     152 ..     113     152 .. 0.76
   3 !   22.2   0.0     3e-08   0.00018       3      38 .]     158     193 ..     156     193 .. 0.77
   4 !    7.4   0.1    0.0015       8.8      10      38 .]     206     234 ..     200     234 .. 0.85
   5 !   27.2   0.1   7.9e-10   4.7e-06       5      38 .]     244     278 ..     241     278 .. 0.95
   6 ?   -1.2   0.0      0.77   4.6e+03      13      32 ..     294     313 ..     284     316 .. 0.73

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.39
                ETTSSEEEEE CS
        WD40 19 spdgawlasG 28
                 +dg++l++G
  EPX71550.1 90 RKDGKLLIAG 99
                3455556555 PP

  == domain 2  score: 21.1 bits;  conditional E-value: 6.8e-08
                 EEEEEESS.SS..EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ss..vtslafspdgawlasGsdDgtvriWd 38 
                  lr+l  H  +  vt ++  +  ++l sGsdD+tv++Wd
  EPX71550.1 115 ILRSLNVHqYPvqVTKFCPYSTTSFL-SGSDDKTVKVWD 152
                 57888899434667877766666666.8**********9 PP

  == domain 3  score: 22.2 bits;  conditional E-value: 3e-08
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  ++ l GH + v++  + +  +++++G  Dgtvr+Wd
  EPX71550.1 158 ATHDLQGHeDYVRAAEWLSATRLVSAGY-DGTVRLWD 193
                 67899***777****6666666665555.*******9 PP

  == domain 4  score: 7.4 bits;  conditional E-value: 0.0015
                 S.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  10 H.ssvtslafspdgawlasGsdDgtvriWd 38 
                 H +sv ++   ++g+ ++s++  ++v++Wd
  EPX71550.1 206 HgDSVDAVLPLQSGSTIISAG-GPSVKVWD 234
                 86668888899999*******.*******9 PP

  == domain 5  score: 27.2 bits;  conditional E-value: 7.9e-10
                 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +tlt H +svt+l++++d++ ++sG+ Dg+v+i++
  EPX71550.1 244 KTLTNHqKSVTCLSTNSDNTRVLSGGLDGHVKIYN 278
                 6899**999************************98 PP

  == domain 6  score: -1.2 bits;  conditional E-value: 0.77
                 EEEEEEETTSSEEEEEETTS CS
        WD40  13 vtslafspdgawlasGsdDg 32 
                 + sl  spd + l+ G+ +g
  EPX71550.1 294 ILSLGLSPDDRNLVVGMTNG 313
                 77777899999999896565 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   0.0   3.8e-05      0.23      47      81 ..      90     124 ..      63     133 .. 0.89
   2 ?    2.5   0.0     0.031   1.8e+02      55      89 ..     141     174 ..     136     177 .. 0.85
   3 !   16.3   0.1   1.5e-06    0.0088      29      84 ..     232     294 ..     229     300 .. 0.84
   4 ?    2.2   0.0     0.038   2.3e+02      40      62 ..     293     315 ..     290     323 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.8e-05
  ANAPC4_WD40  47 kpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  ++dgklL  + + g v+++d ++  +++sl+v++ 
   EPX71550.1  90 RKDGKLLIAGDATGLVQIFDLSTRSILRSLNVHQY 124
                  78*****************************9986 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.031
  ANAPC4_WD40  55 vaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                   + +d +v++ d  +g+  h l+ +++  v   +W
   EPX71550.1 141 SGSDDKTVKVWDLATGEATHDLQGHED-YVRAAEW 174
                  678899****************99998.5888888 PP

  == domain 3  score: 16.3 bits;  conditional E-value: 1.5e-06
  ANAPC4_WD40  29 vwtl.........eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekav 84 
                  vw+l         + ++++++v++L+ + d++    +  dg+v+++++ + kvvh +++++   +
   EPX71550.1 232 VWDLvagkstaakTLTNHQKSVTCLSTNSDNTRVLSGGLDGHVKIYNVADWKVVHGIKYSAP--I 294
                  565555666666566899***************************************99876..5 PP

  == domain 4  score: 2.2 bits;  conditional E-value: 0.038
  ANAPC4_WD40  40 evrsLaWkpdgklLavaysdgev 62 
                   + sL  +pd++ L+v++ +g++
   EPX71550.1 293 PILSLGLSPDDRNLVVGMTNGAL 315
                  5789999*************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (494 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       480  (0.0267723); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 3533.67
//
Query:       EPX71551.1  [L=821]
Description: gamma tubulin complex Spc98/GCP3 subunit Alp6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.2e-84  282.6  10.3    8.4e-84  281.6  10.3    1.5  1  GCP_C_terminal  Gamma tubulin complex component C-terminal
    1.3e-64  218.8   4.5    1.3e-64  218.8   4.5    2.0  3  GCP_N_terminal  Gamma tubulin complex component N-terminal


Domain annotation for each model (and alignments):
>> GCP_C_terminal  Gamma tubulin complex component C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  281.6  10.3   9.4e-88   8.4e-84       1     309 []     499     814 ..     499     814 .. 0.93

  Alignments for each domain:
  == domain 1  score: 281.6 bits;  conditional E-value: 9.4e-88
  GCP_C_terminal   1 LlehLkllkrylLlgqgdFisrLldalfdelwkpasselrlaLtslLeeairssnaqqsdelkddlsfaldlpevleeldakldpdsle..gldf 93 
                     L ehL+++k+y+LlgqgdF++ L+++l d+l++pa++++r++Lt+ Le+airssna++            +++ +l+ lda+l ++s++  g+d+
      EPX71551.1 499 LSEHLNAIKKYILLGQGDFVTYLMESLGDSLEQPANTLFRHNLTACLESAIRSSNASY------------EQEYILKCLDARLLELSHGevGWDV 581
                     789***************************************************9988............9999*********999*999***** PP

  GCP_C_terminal  94 ltLeYkvpwplslvitpealekYqriFrfLlrvkrvefalsslwkrrkatgarsvl.........lkrarllrqemlhfvsqlqyYvldeviess 179
                     +tLeYkv++p++++itp + ++Y+++F+fL+r+kr++f+ls++w rr++ gar+           ++ +   ++em+hf  qlqyY+l+evie s
      EPX71551.1 582 FTLEYKVDSPINVIITPYCSRQYLKMFNFLWRLKRIKFVLSHSW-RRSTLGARNIIreldfvqpeWHFVSIHLAEMIHFTCQLQYYILFEVIEIS 675
                     ********************************************.99999999555778899999****************************** PP

  GCP_C_terminal 180 Wreleekl.kkeatdldelieaHeafLdsilkkclLrskk.....kllklleeilelileFakvldgly.lsvselt........aeeaeeeele 259
                     W++l++++ k +at ld+ ieaH+++++si++k+lL+s +     ++l++l+eil++il+F++ ++ ly +svs ++        ++e+ eee  
      EPX71551.1 676 WEKLKDEMsKPNAT-LDTYIEAHHHYVTSITHKGLLGSARsrtedSFLHQLHEILKTILSFHNTIEILYsFSVSLYSrlkvnapiSTESLEEEYV 769
                     ********888899.**********************996679999********************99988888877999966554443444444 PP

  GCP_C_terminal 260 ekleerleelekeFrkkvslllkvlralkeqeededlrqLllrLdfnefY 309
                       ++e+l++++++F+ +++ +l  l a   q+ d+++r+L +rL+fnefY
      EPX71551.1 770 P-IQEKLQQCSEDFQLRLKHFLYGL-AT--QK-DSEMRFLSVRLNFNEFY 814
                     4.78*********************.54..77.89**************9 PP

>> GCP_N_terminal  Gamma tubulin complex component N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0      0.46   4.1e+03     122     149 ..      74     103 ..      56     129 .. 0.63
   2 !  218.8   4.5   1.5e-68   1.3e-64       4     306 .]     193     496 ..     191     496 .. 0.94
   3 ?   -2.9   0.2      0.46   4.1e+03      55     115 ..     733     793 ..     692     806 .. 0.47

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 0.46
  GCP_N_terminal 122 lrvLanlveevekanl..kggallsllhea 149
                     ++ L+nlv++ +++++  + + +l++l++ 
      EPX71551.1  74 FSRLSNLVSRLRTQEVlqNKASILQVLFSL 103
                     444555555555444333355555555552 PP

  == domain 2  score: 218.8 bits;  conditional E-value: 1.5e-68
  GCP_N_terminal   4 llylLqGisgklirfdekddervvkdvrlpgllppslrslverllelgtlyrrlrkfveev..............srsesglvlqalaaaldeel 84 
                      l++LqG+s +l++f  ++        +l+  +p      + +l+e+g ly++l++f++                s  e++l lq+++a +++el
      EPX71551.1 193 TLFILQGVSTDLVKFHGRTA-------DLSEQIPSHHILQIRSLCEIGLLYQELKEFADYDgfrtsnsalniynsSPEEQTLALQSFRAFISKEL 280
                     69************999555.......6666679999999******************66577888999*****999****************** PP

  GCP_N_terminal  85 teyyrliaqlEsqlledsesi...ltLlrlevwlqetllllrvLanlveevekanlkggallsllheaaqhgdpkvrkllsellervsrpfleml 176
                     t+y+ lia+lEsql++ds++    ++++r+ vw+++ +l++r+L+++v++  k++    +l++++ +++ hgdp + +l +++l ++++p+ em+
      EPX71551.1 281 TQYLSLIASLESQLRTDSSTRsqtVSIRRCIVWTNNARLKFRILSSIVNSFIKEKN-KKKLIHIVARYSFHGDPIIHELSKRVLVEITQPLHEMI 374
                     *****************998899**************************9996666.99************************************ PP

  GCP_N_terminal 177 ekWileGelsDpynEfFveenesvakeklkeddseklweekYtlrkemlPsflseelaekIletGkslnflrescgdsewiektes.eekeleyi 270
                     e+W+++Gel Dp+ EfFv e ++++++++ ++++  +w+ kY l ke +Psfls++l+ekI+++Gk lnf r+ cgdsew +k++s   k+l+y+
      EPX71551.1 375 ENWVYKGELIDPFREFFVIETDDTSQTHDRQGTGRIVWKGKYHLEKELIPSFLSNALVEKIFLIGKCLNFARYGCGDSEWTQKHYSeFAKKLSYT 469
                     ************************99999999************************************************999999766788888 PP

  GCP_N_terminal 271 ddleelssslslsleelidsayklaskrllelLfke 306
                     d  +        sl+ +id ay++ +++l++l+ ++
      EPX71551.1 470 D-FQ--------SLKLTIDMAYTQSTRHLVQLMEEK 496
                     8.66........7*******************9776 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 0.46
  GCP_N_terminal  55 rrlrkfveevsrsesglvlq.alaaaldee.lteyyrliaqlEsqlledsesiltLlrlevwl 115
                      +  + +e   +++++l+ +  ++a +++e l+e y  i +  +q++ed++  l L+++ + l
      EPX71551.1 733 LSFHNTIEILYSFSVSLYSRlKVNAPISTEsLEEEYVPIQEKLQQCSEDFQ--LRLKHFLYGL 793
                     222222222222333333331233334433355555555555556666665..6666655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (821 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       854  (0.0476323); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.77u 0.33s 00:00:01.10 Elapsed: 00:00:00.55
# Mc/sec: 4487.15
//
Query:       EPX71552.1  [L=946]
Description: DNA replication factor C complex subunit Ctf18 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.2e-08   32.6   0.0      2e-07   31.5   0.0    1.6  1  AAA              ATPase family associated with various cellul
      7e-06   26.1   0.0    2.3e-05   24.4   0.0    1.9  1  AAA_14           AAA domain
    1.5e-05   25.4   0.1    0.00015   22.2   0.1    2.4  2  AAA_16           AAA ATPase domain
    2.6e-05   24.0   0.9      5e-05   23.1   0.9    1.4  1  AAA_30           AAA domain
    3.7e-05   24.0   0.1     0.0003   21.1   0.0    2.5  2  AAA_22           AAA domain
     0.0001   22.3   0.0    0.00033   20.7   0.0    1.9  1  AAA_5            AAA domain (dynein-related subfamily)
    0.00027   20.9   0.0       0.06   13.3   0.0    2.4  2  Rad17            Rad17 P-loop domain
     0.0013   19.3   0.0     0.0058   17.2   0.0    2.1  1  ABC_tran         ABC transporter
     0.0025   17.8   0.1     0.0068   16.3   0.1    1.8  1  NACHT            NACHT domain
     0.0025   18.0   0.0     0.0062   16.7   0.0    1.7  1  AAA_33           AAA domain
     0.0067   16.3   0.0       0.36   10.6   0.0    2.7  2  dNK              Deoxynucleoside kinase
      0.008   16.1   0.1      0.019   14.8   0.1    1.6  1  RsgA_GTPase      RsgA GTPase
     0.0089   15.2   0.0      0.018   14.2   0.0    1.4  1  NB-ARC           NB-ARC domain
  ------ inclusion threshold ------
      0.015   15.3   0.0      0.034   14.2   0.0    1.5  1  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
      0.029   14.1   0.0      0.094   12.5   0.0    1.8  2  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
       0.03   14.7   0.0      0.091   13.2   0.0    1.9  1  RNA_helicase     RNA helicase
      0.034   13.4   0.1      0.063   12.6   0.1    1.3  1  Zeta_toxin       Zeta toxin
      0.042   14.4   1.6      0.091   13.3   0.0    2.4  1  AAA_18           AAA domain
      0.051   14.0   0.0       0.31   11.5   0.0    2.2  2  AAA_17           AAA domain
      0.052   12.9   0.0        0.1   11.9   0.0    1.4  1  AAA_8            P-loop containing dynein motor region D4
      0.079   12.5   0.0       0.16   11.5   0.0    1.5  1  cobW             CobW/HypB/UreG, nucleotide-binding domain
      0.086   12.7   0.1       0.32   10.9   0.0    2.0  2  ATPase_2         ATPase domain predominantly from Archaea
        0.1   13.0   0.0       0.48   10.8   0.0    2.2  1  AAA_assoc_2      AAA C-terminal domain
       0.11   11.8   0.0       0.22   10.9   0.0    1.3  1  ATPase           KaiC
       0.13   12.2   0.0       0.26   11.2   0.0    1.5  1  NTPase_1         NTPase
       0.13   12.0   0.0       0.69    9.6   0.0    2.0  2  AAA_24           AAA domain
       0.13   11.7   0.1       0.24   10.8   0.1    1.3  1  PhoH             PhoH-like protein
       0.14   11.9   0.0       0.36   10.6   0.0    1.6  1  AAA_29           P-loop containing region of AAA domain
       0.29   10.8   1.3       0.58    9.9   0.1    2.1  2  Viral_helicase1  Viral (Superfamily 1) RNA helicase
       0.67   10.4   0.0       0.67   10.4   0.0    2.8  1  AAA_23           AAA domain


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.5   0.0   3.4e-10     2e-07       1      69 [.     408     475 ..     408     527 .. 0.84

  Alignments for each domain:
  == domain 1  score: 31.5 bits;  conditional E-value: 3.4e-10
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTS.TSEEEEEETGGG CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakeka.kpsilfiDEida 69 
                 ++l+G  G GKT+la+ +a+++g ++lei++s+ +  + +   +ki + ++  ++ + +p++++ DE+d 
  EPX71552.1 408 MVLTGHAGSGKTTLAHVIARQAGYKVLEINASDDR--TASTVHEKIGAAVSYHSALSsQPTCVVADEVDG 475
                 789********************************..66666666666666655555779********96 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.0   3.9e-08   2.3e-05       2     108 ..     405     509 ..     404     514 .. 0.81

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 3.9e-08
      AAA_14   2 rkilvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelilek..lkeekktylflDEiqe.vpewekalkslvdegknldviv 97 
                 ++i+v+tG   +GKTtl++ ++++      ++l+in  d+r+++  +++ +  ++  +  l++ + t+++ DE+    p + +al  l++++++  v  
  EPX71552.1 405 KRIMVLTGHAGSGKTTLAHVIARQAG---YKVLEINASDDRTASTVHEK-IGAAVSYHsaLSS-QPTCVVADEVDGgDPAFIRALVALLESDEKASVAQ 498
                 689***************99999998...9*********9997655443.3333333321444.99********9626899*********999999999 PP

      AAA_14  98 tGSnskllske 108
                 t  +sk +sk+
  EPX71552.1 499 TSTKSKKKSKQ 509
                 99999999886 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.1   2.5e-07   0.00015      15      63 ..     396     441 ..     393     464 .. 0.75
   2 ?    0.4   0.0       1.2   7.4e+02     117     163 ..     445     492 ..     434     499 .. 0.70

  Alignments for each domain:
  == domain 1  score: 22.2 bits;  conditional E-value: 2.5e-07
      AAA_16  15 alervrsgrpelvllsGesGvGKsslvrellralekdggiflrgkcdql 63 
                 a++++ +++ ++++l+G++G+GK++l+  ++r++  +   +l+ ++ + 
  EPX71552.1 396 AVRDTGRPDKRIMVLTGHAGSGKTTLAHVIARQAGYK---VLEINASDD 441
                 6666666677**********************99988...555544444 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 1.2
      AAA_16 117 srllellkrll.allsrderplvlvlDdlqwadeaslqllaaLlrlle 163
                 s ++e++ +++   ++  ++p+ +v D+++  d+a   +l aLl++ e
  EPX71552.1 445 STVHEKIGAAVsYHSALSSQPTCVVADEVDGGDPAFIRALVALLESDE 492
                 666666666664233333568************998888888888766 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.9   8.3e-08     5e-05       8     107 ..     395     483 ..     392     499 .. 0.74

  Alignments for each domain:
  == domain 1  score: 23.1 bits;  conditional E-value: 8.3e-08
      AAA_30   8 aavealltsgdrvavltGpAGtGKttalkalreaweaaggrvi.glAptgkaAkvLaeelgieastiakllkrlkgrarlepgtllivDEagmvdtkql 105
                 aav+ +   ++r++vltG AG+GKtt+  +++   ++ag++v+ + A+  + A ++ e++g +a + ++ l+++         t+++ DE+   d + +
  EPX71552.1 395 AAVRDTGRPDKRIMVLTGHAGSGKTTLAHVIA---RQAGYKVLeINASDDRTASTVHEKIG-AAVSYHSALSSQ--------PTCVVADEVDGGDPAFI 481
                 678888888899**************988775...56789998688**************9.666777777332........25666666655555555 PP

      AAA_30 106 aa 107
                 +a
  EPX71552.1 482 RA 483
                 55 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0     5e-07    0.0003       4      64 ..     404     455 ..     402     475 .. 0.92
   2 ?   -1.5   0.0       4.6   2.7e+03      40      78 ..     535     570 ..     524     610 .. 0.72

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 5e-07
      AAA_22   4 tagilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellral 64 
                 +++i+v+tG++G+GKTtl+  +++q+         + +v++++++ + + +++ +++  a+
  EPX71552.1 404 DKRIMVLTGHAGSGKTTLAHVIARQA---------GYKVLEINASDDRTASTVHEKIGAAV 455
                 589**********************9.........*****************999998776 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 4.6
      AAA_22  40 pevvfvtlpsstsskdllrellralglelkaerlsseel 78 
                 ++vv++++p + ++   lr ++r  +l+ ++   +s  l
  EPX71552.1 535 AQVVYFNAPPQATLVGRLRSICRSQNLSIDS---RSLTL 570
                 6788999999998888888888887777777...33333 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   5.6e-07   0.00033       2     122 ..     408     522 ..     407     532 .. 0.75

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 5.6e-07
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------.G-SEEEEESGGG--HHHHHHHHHHHHSSE.EE..- CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar.egeilvlDEveraesevlnsLlslleerr.lllee 98 
                 ++L G  G+gK++la  +a+  + +v++++ ++d t++++  ++      ++   s+l      ++  +v DEv+  +++ + +L  lle ++  ++++
  EPX71552.1 408 MVLTGHAGSGKTTLAHVIARQAGYKVLEINASDDRTASTVHEKIGA----AVSYHSAL----SsQPTCVVADEVDGGDPAFIRALVALLESDEkASVAQ 498
                 689****************************************995....22222222....247888999******************9665155555 PP

                 SSSEEE---.........-EEEEEESS CS
       AAA_5  99 ggelvkaknddller...frviatanp 122
                   +  k+k+++   +     +i  +n+
  EPX71552.1 499 TSTKSKKKSKQ---KticRPIICICND 522
                 55555555543...2244555555555 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.1     0.037        22       5      33 ..     338     370 ..     335     372 .. 0.67
   2 !   13.3   0.0    0.0001      0.06      44      81 ..     404     440 ..     395     473 .. 0.78

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.037
       Rad17   5 enelWfekykPekaeela....vhkkkieevke 33 
                   e W++k++P+  +el     vh+  ++ +k 
  EPX71552.1 338 TEEMWVDKFRPQLFRELIgderVHRDAMRWIKA 370
                 5799********999996222255544444444 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 0.0001
       Rad17  44 kkriLLisGPsGCgkstvvkvLskelgiklrewlnpvs 81 
                  kri++++G +G gk+t  +v++++ g+k+ e +n+  
  EPX71552.1 404 DKRIMVLTGHAGSGKTTLAHVIARQAGYKVLE-INASD 440
                 589***************************98.45444 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   9.6e-06    0.0058      12      89 ..     406     498 ..     402     515 .. 0.64

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 9.6e-06
                 SEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH................HHHTCHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................xxxxxxxxxx RF
    ABC_tran  12 ekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren................esdeeiekal 89 
                 ++++++G+ G+GK+tL+ ++a++   +  ei+  ++ + ++ +e+  + +++ +   + +p+  v+++                esde+++ a 
  EPX71552.1 406 RIMVLTGHAGSGKTTLAHVIARQAGYKVLEINASDDRTASTVHEKIGAAVSYHSAL-SSQPTCVVADEvdggdpafiralvallESDEKASVAQ 498
                 6789******************9988888886665555555555555555554444.4445544555556666666666666665555544444 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.1   1.1e-05    0.0068       1      24 [.     406     429 ..     406     438 .. 0.89

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 1.1e-05
                 SCEEEEC-TTTCHHHHHHHHHHHH CS
       NACHT   1 rlvilqGeaGsGKTtLlqklalaw 24 
                 r+++l+G aGsGKTtL++ +a+++
  EPX71552.1 406 RIMVLTGHAGSGKTTLAHVIARQA 429
                 689*****************9876 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0     1e-05    0.0062       2      32 ..     408     438 ..     407     516 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 1e-05
      AAA_33   2 vllvGlpGsGKstlaerllkklgavllssdt 32 
                 ++l G++GsGK+tla+ ++++ g+ +l+ ++
  EPX71552.1 408 MVLTGHAGSGKTTLAHVIARQAGYKVLEINA 438
                 6789*******************99997665 PP

>> dNK  Deoxynucleoside kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.0   0.00061      0.36       2      28 ..     409     435 ..     408     445 .. 0.90
   2 ?    2.4   0.0      0.21   1.2e+02     113     173 ..     524     585 ..     504     608 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00061
                 EEEESTTSSHHHHHHHHHCCSTCEEEE CS
         dNK   2 vveGnIgaGKstlvklLskklgvkvfe 28 
                 v+ G  g+GK+tl++++++++g+kv+e
  EPX71552.1 409 VLTGHAGSGKTTLAHVIARQAGYKVLE 435
                 7889*******************9975 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.21
                 HHHHHHHCCH-SEEEEEE--HH.HHHHHHHHCTTCCCTTS-HHHHHHHHHHHHHHHTSGGCS CS
         dNK 113 ldnlleelakpdlliYLkasle.tclerikkRgreeekkieldYlekLhekyeewlkklnev 173
                 +  +l+ l     ++Y +a+++ t++ r++  +r+++  i+ + l  L   y++ ++++ ++
  EPX71552.1 524 YTPALRPLRPYAQVVYFNAPPQaTLVGRLRSICRSQNLSIDSRSLTLLTDIYNSDIRSCLNS 585
                 55555555556789******9835678*************************9999885433 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.1   3.3e-05     0.019      99     140 ..     405     446 ..     397     460 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 3.3e-05
                  TSEEEEECSTTSSHHHHHHHHCTT-----S------------ CS
  RsgA_GTPase  99 dktsvlvGqSGvGKStLinallpelelktgevseklgrGkhT 140
                  ++++vl G+ G GK+tL  +++ ++  k+ e+ ++++r   T
   EPX71552.1 405 KRIMVLTGHAGSGKTTLAHVIARQAGYKVLEINASDDRTAST 446
                  6899*****************************999986655 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.0     3e-05     0.018      16      43 ..     401     428 ..     393     464 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3e-05
                 TTSCSEEEEEEESTTSSHHHHHHHHCCS CS
      NB-ARC  16 delqslvvalvGmgGvGKttlakqilnk 43 
                 + +++ ++ l G +G+GKttla+ i ++
  EPX71552.1 401 GRPDKRIMVLTGHAGSGKTTLAHVIARQ 428
                 567888****************999876 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   5.7e-05     0.034      19      47 ..     405     435 ..     390     439 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 5.7e-05
                 TEEEEEEESTTSSHHHHHHHHHHHTT--..- CS
        TsaE  19 gdvilLeGdLGaGKTtlvrglakalgve..e 47 
                 +++++L+G  G+GKTtl++ +a++ g++  e
  EPX71552.1 405 KRIMVLTGHAGSGKTTLAHVIARQAGYKvlE 435
                 5679********************9987555 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       5.2   3.1e+03       2      19 ..     347     364 ..     346     370 .. 0.81
   2 ?   12.5   0.0   0.00016     0.094      36      61 ..     408     433 ..     388     472 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 5.2
      RuvB_N   2 rPksleeyigqekvkekl 19 
                 rP+ ++e ig e+v+ + 
  EPX71552.1 347 RPQLFRELIGDERVHRDA 364
                 9***********998764 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 0.00016
      RuvB_N  36 vllyGpPGlGkttlakiiakelgvkl 61 
                 ++l+G  G Gkttla++ia++ g k+
  EPX71552.1 408 MVLTGHAGSGKTTLAHVIARQAGYKV 433
                 5789***************9988765 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   0.00015     0.091       2      57 ..     409     471 ..     408     520 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 0.00015
  RNA_helicase   2 wlyGpsgeGKStlakeLakallkkl......klkkkdsvys.rnpeddfwdgYtgqevvvidD 57 
                   +l+G++g GK+tla+ +a++   k+      ++ ++++v    +++ ++++  ++q+ +v+ D
    EPX71552.1 409 VLTGHAGSGKTTLAHVIARQAGYKVleinasDDRTASTVHEkIGAAVSYHSALSSQPTCVVAD 471
                   799******************977778887666666666667789999999999776666665 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   0.00011     0.063      15      56 ..     404     443 ..     393     468 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00011
  Zeta_toxin  15 rPklillgGqpGAGKselaellkdelerqgnvvrldpDdlRe 56 
                  + +++l G  G+GK++la+ ++++   + +v+++++ d R+
  EPX71552.1 404 DKRIMVLTGHAGSGKTTLAHVIARQA--GYKVLEINASDDRT 443
                 4568999*****************98..89999999877776 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   0.00015     0.091       2      25 ..     409     435 ..     408     460 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 0.00015
      AAA_18   2 lltGtpGvGKttlakeLskrlgf...g 25 
                 +ltG +G+GKttla+ +++  g+    
  EPX71552.1 409 VLTGHAGSGKTTLAHVIARQAGYkvlE 435
                 69****************998665552 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00051      0.31       1      25 [.     411     435 ..     411     461 .. 0.92
   2 ?   -1.5   0.0       5.1     3e+03     101     122 ..     532     554 ..     522     566 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00051
                 EE-TTSSHHHHHHHHHHHHTEEEEE CS
      AAA_17   1 lGgPGsGKgtqceklvekygfthls 25 
                 +G  GsGK+t++  ++++ g+++l+
  EPX71552.1 411 TGHAGSGKTTLAHVIARQAGYKVLE 435
                 6889******************985 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 5.1
                 ...SEEEEEE--HHHHHHHHHHH CS
      AAA_17 101 kp.daiilleadpeeilerrlkd 122
                  p   +++++a+p+  l  rl+ 
  EPX71552.1 532 RPyAQVVYFNAPPQATLVGRLRS 554
                 554789********777666665 PP

>> AAA_8  P-loop containing dynein motor region D4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00017       0.1      27     110 ..     408     492 ..     402     514 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00017
       AAA_8  27 aLlvGvgGsGrqsltkLAafiaelelfqievtkkykekefredlkkllk.kagikqkevvfllsdnqiieesfledinnlLntGe 110
                 + l G +GsG+ +l+++ a  a++++ +i+ + + + +  +e++   +  + ++  ++++ + ++ +  + +f++ +  lL++ e
  EPX71552.1 408 MVLTGHAGSGKTTLAHVIARQAGYKVLEINASDDRTASTVHEKIGAAVSyHSALSSQPTCVVADEVDGGDPAFIRALVALLESDE 492
                 5688****************************************88766156788999999999999999999999999998765 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00027      0.16       2      29 ..     407     433 ..     406     440 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00027
                 EEEEEESTTCCHHHHHHHHHCT--SS-E CS
        cobW   2 vtvltGflGsGKTtLlnhllenraglkl 29 
                 ++vltG  GsGKTtL  h+++++ag+k+
  EPX71552.1 407 IMVLTGHAGSGKTTL-AHVIARQAGYKV 433
                 689***********7.677777777775 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00054      0.32      20     116 ..     405     510 ..     400     526 .. 0.64
   2 ?   -2.9   0.1       8.5   5.1e+03      71     102 ..     850     881 ..     840     887 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00054
    ATPase_2  20 neiyfiYGpegsGKtaLlkeiienledkdkyviyyialreesiskldefie..eeeekkklekal.........giavpkaeleeilk.eksklvfkai 106
                 ++i++++G  gsGKt+L   i+ +    +++v+ ++a  ++  s++ e+i+   ++ +   ++++         g++    +l ++l+ ++++ v +  
  EPX71552.1 405 KRIMVLTGHAGSGKTTLAHVIARQA---GYKVLEINASDDRTASTVHEKIGaaVSYHSALSSQPTcvvadevdgGDPAFIRALVALLEsDEKASVAQTS 500
                 689**************98887766...78888888888888999999988652232222223325666666775555555555666664455555555 PP

    ATPase_2 107 elllekikkk 116
                 ++ ++k k+k
  EPX71552.1 501 TKSKKKSKQK 510
                 5544444444 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 8.5
    ATPase_2  71 eeeekkklekalgiavpkaeleeilkeksklv 102
                 +e  +k+le++ ++ +pka+  e +k+k+k+v
  EPX71552.1 850 QELLRKRLEQVQKNSIPKASSSESSKKKRKEV 881
                 55667888999999999999988888777765 PP

>> AAA_assoc_2  AAA C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00081      0.48       3      40 ..     559     596 ..     557     624 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00081
                  X.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX. CS
  AAA_assoc_2   3 kklkleddalealaeladGDaRkaLnlLElaaeaaeak 40 
                  ++l++++  l++l+++ + D+R++Ln L+l+  +a++ 
   EPX71552.1 559 QNLSIDSRSLTLLTDIYNSDIRSCLNSLQLLSLKASSI 596
                  68999************************888777642 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00036      0.22      14      37 ..     400     423 ..     394     450 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00036
      ATPase  14 gGipegrvvlitGepGtGKtifal 37 
                  G p++r++ +tG++G+GKt++a 
  EPX71552.1 400 TGRPDKRIMVLTGHAGSGKTTLAH 423
                 5889*****************985 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00044      0.26       2      27 ..     408     430 ..     407     446 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00044
                 EEEE--TTSSHHHHHHHHHHHH...G CS
    NTPase_1   2 vfiTGppGvGKtTlvkkvlellkssg 27 
                 +++TG+ G+GKtTl + ++++    g
  EPX71552.1 408 MVLTGHAGSGKTTLAHVIARQA---G 430
                 589*************999876...4 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.0    0.0011      0.69       3      31 ..     406     438 ..     404     471 .. 0.80
   2 ?   -0.8   0.0       1.8   1.1e+03      48      98 ..     746     795 ..     730     799 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.0011
      AAA_24   3 lkiliyGpsgiGKTtlakel....gpkplfidt 31 
                 + ++++G +g+GKTtla  +    g+k+l i+ 
  EPX71552.1 406 RIMVLTGHAGSGKTTLAHVIarqaGYKVLEINA 438
                 5689************99888888888888875 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 1.8
      AAA_24  48 swedfldevvelaaeladyktlviDtideleelclaevirqnekaeskedk 98 
                  +++f++ +++ + e  + +t+ +D id l + +   +++ ++  +s edk
  EPX71552.1 746 ILDTFMSSFNAQDLEFYRKQTVLLDLIDPLLSVINPPIKKSSRS-SSAEDK 795
                 56778888888888888889**********99999999888887.666665 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.1    0.0004      0.24      18      42 ..     404     428 ..     392     436 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.0004
                 H-SEEEEE--TTSSTTHHHHHHHHH CS
        PhoH  18 kndivfaiGpaGtGKtylavalave 42 
                 ++ i++ +G+aG+GKt la ++a +
  EPX71552.1 404 DKRIMVLTGHAGSGKTTLAHVIARQ 428
                 56799**************999866 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0    0.0006      0.36      24      38 ..     407     421 ..     398     426 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.0006
      AAA_29  24 atlltGpsGsGKSTl 38 
                 +++ltG+ GsGK+Tl
  EPX71552.1 407 IMVLTGHAGSGKTTL 421
                 799***********9 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.1   0.00097      0.58       2      88 ..     409     490 ..     408     510 .. 0.76
   2 ?   -1.6   0.1         3   1.8e+03     107     168 ..     861     920 ..     857     931 .. 0.73

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00097
  Viral_helicase1   2 vvhGvpGcGKStlirkllrts.liltvnrptaelltegkpklpnlsvrtvdsflmalvkstkgkililDEylllhaGyilllaalska 88 
                      v  G +G+GK+tl   ++r+  +   ++ + +++  ++   + ++++  + s+++al+ +     ++ DE   ++++ i +l+al ++
       EPX71552.1 409 VLTGHAGSGKTTLAHVIARQAgY---KVLE-INASDDRTASTVHEKIGAAVSYHSALSSQ--PTCVVADEVDGGDPAFIRALVALLES 490
                      6789***************9443...3444.55566666666777777788888888876..56788899988888888887776665 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 3
  Viral_helicase1 107 asfllahlpsslshrvgrrttyllpsdvaeilsakvgteveversgelkvetepkgqekvlv 168
                      ++ ++++ +ss s+ ++r+ + l ++ + ++  +  +   ++e+s+e+  et+p ++ekv++
       EPX71552.1 861 QKNSIPKASSSESSKKKRKEVGLERTIRRDFFGREIKVPQHIENSVEN--ETSPISSEKVIA 920
                      445788888888888899999999999999999998889999999999..555555533333 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0    0.0011      0.67      18      47 ..     404     433 ..     399     514 .. 0.56

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.0011
      AAA_23  18 skgltlItGpNGaGKTTildAiklaLyget 47 
                 +k + ++tG+ G+GKTT+   i    + ++
  EPX71552.1 404 DKRIMVLTGHAGSGKTTLAHVIARQAGYKV 433
                 67899*************988875444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (946 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       940  (0.052429); expected 358.6 (0.02)
Passed bias filter:                      554  (0.0308997); expected 358.6 (0.02)
Passed Vit filter:                       105  (0.00585643); expected 17.9 (0.001)
Passed Fwd filter:                        30  (0.00167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              30  [number of targets reported over threshold]
# CPU time: 0.83u 0.33s 00:00:01.15 Elapsed: 00:00:00.51
# Mc/sec: 5571.56
//
Query:       EPX71553.1  [L=239]
Description: Nem1-Spo7 complex regulatory subunit Spo7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-36  124.9  13.7    2.2e-30  105.8  10.7    2.1  2  Spo7      Spo7-like protein


Domain annotation for each model (and alignments):
>> Spo7  Spo7-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.8  10.7   1.2e-34   2.2e-30       5     124 ..      11     121 ..       8     126 .. 0.95
   2 !   20.1   0.0     2e-08   0.00036     184     219 ..     130     165 ..     125     168 .. 0.90

  Alignments for each domain:
  == domain 1  score: 105.8 bits;  conditional E-value: 1.2e-34
        Spo7   5 kiyrnLLiLEesLraqalelrarrrkytlflllLalviafflyalflapredgsgvggsvywvvevvekvlliggvvTlvLfwlsGeyertiviprrfl 103
                 ++y nLLiLE+s r+++l+lr rrrky  f + ++++ ++f+y++f+          +s y +++++ k++l++g+vT++Lf++ G y+ +i +p r++
  EPX71553.1  11 AVYHNLLILEASFRKTYLQLRSRRRKYLAFYISMLTWNVYFSYRVFF---------RASLYSLIDLIYKLCLLSGIVTMLLFYVLGLYRSSIAYPSRYI 100
                 69*********************************************.........457899************************************* PP

        Spo7 104 svtNrgLRqfNvklvkvkrsl 124
                 ++tN++LR fN++lv+   ++
  EPX71553.1 101 QQTNKALRLFNIRLVITPIPF 121
                 ***************987665 PP

  == domain 2  score: 20.1 bits;  conditional E-value: 2e-08
        Spo7 184 ddvkllLlpkafspefRegweiYRaefwerenerrr 219
                 d v l+L +k f+  + egwe +R+ +   e+ r++
  EPX71553.1 130 DGVHLVLSSKRFDILVIEGWEAFRTAYMTSEQRRQK 165
                 6799************************99998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       871  (0.0485805); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.29s 00:00:00.80 Elapsed: 00:00:00.48
# Mc/sec: 1501.91
//
Query:       EPX71554.1  [L=563]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      2e-06   28.0   0.0    4.9e-06   26.8   0.0    1.7  1  PWI           PWI domain
    1.2e-05   25.1   0.2    8.3e-05   22.3   0.0    2.4  2  RRM_1         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
    0.00064   19.5   0.0     0.0015   18.4   0.0    1.6  1  RRM_occluded  Occluded RNA-recognition motif
  ------ inclusion threshold ------
      0.026   14.7   4.2       0.16   12.2   0.0    2.9  3  PHM7_cyt      Cytosolic domain of 10TM putative phosphate tra
       0.11   12.1   0.7       0.25   11.0   0.7    1.6  1  Vac_Fusion    Chordopoxvirus multifunctional envelope protein


Domain annotation for each model (and alignments):
>> PWI  PWI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.0   1.4e-09   4.9e-06       3      66 ..      12      77 ..      10      82 .. 0.82

  Alignments for each domain:
  == domain 1  score: 26.8 bits;  conditional E-value: 1.4e-09
         PWI  3 lkpWIakkitellgfeDdvvieyvlnlLeee..keldpkklqinltgfLekeaekFvkeLWellls 66
                lk++ +k ++ + +++  v+ +y+++lL +e  +e   +    +l++fL++e+  Fv++++++l +
  EPX71554.1 12 LKKYLEKALEPISDADAGVLSDYAMALLRHEssEEEVRQLCYSQLEDFLRQETVPFVDKIFDVLRE 77
                8***************************443213334444456*******************9865 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   2.3e-08   8.3e-05       3      69 ..     237     298 ..     235     299 .. 0.86
   2 ?   -0.6   0.0      0.34   1.2e+03       4      52 ..     482     523 ..     479     527 .. 0.63

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 2.3e-08
                 EESETT.TSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   3 VgnLpp.dvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 V+n+p+ +++ee++  +FskfG  ++++l ++     +  a+ +F+s+e+A++A +   +  +++r +
  EPX71554.1 237 VRNIPEeYMDEEKVNSFFSKFGVLEKVELDPQ-----HHAAILTFTSHEAAQNAWS-TPEPIFNNRFI 298
                 9999651579********************97.....*****************98.77777777766 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.34
                 ESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHH CS
       RRM_1   4 gnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedA 52 
                 +n++p+ +e  L  +Fs +G+++si+  +       g   ++F+++ +A
  EPX71554.1 482 KNVTPEKNEALLQFVFS-IGDYESIDELN------PGERLINFQNRKAA 523
                 78888877777766665.77777776555......45555556655555 PP

>> RRM_occluded  Occluded RNA-recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   4.1e-07    0.0015       8      51 ..     239     282 ..     232     298 .. 0.86

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 4.1e-07
  RRM_occluded   8 plsDt.vnkariralveekegeikkivLvpdheGAivefkdekia 51 
                   ++++  + ++++++++++  g ++k+ L p+h++Ai+ f+++++a
    EPX71554.1 239 NIPEEyMDEEKVNSFFSKF-GVLEKVELDPQHHAAILTFTSHEAA 282
                   66654266789********.********************99887 PP

>> PHM7_cyt  Cytosolic domain of 10TM putative phosphate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   4.5e-05      0.16       4      27 ..     235     258 ..     232     266 .. 0.84
   2 ?   -1.9   0.0      0.97   3.5e+03     121     138 ..     268     285 ..     258     294 .. 0.74
   3 ?    2.5   0.7     0.044   1.6e+02      36      80 ..     345     388 ..     329     439 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 4.5e-05
    PHM7_cyt   4 vlvtgiPkelrseeklkeffeely 27 
                 + v++iP+e+++eek+++ff+++ 
  EPX71554.1 235 LHVRNIPEEYMDEEKVNSFFSKFG 258
                 459*****************9974 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.97
    PHM7_cyt 121 plgaaFvtfesersaaav 138
                 + +aa  tf s ++a+++
  EPX71554.1 268 QHHAAILTFTSHEAAQNA 285
                 457999999998888877 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.044
    PHM7_cyt  36 qivrdvkkldklveerekavrkleaalskykkngkklpkkrpthk 80 
                  + +d+++ +kl eer k +++ ++al++++ ++++l+  ++  +
  EPX71554.1 345 DFHKDIAEKQKLHEERMKRLEENKKALEELNIRKQELA-LQQLEQ 388
                 57788999999999999999999999998887777663.333333 PP

>> Vac_Fusion  Chordopoxvirus multifunctional envelope protein A27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.7   7.1e-05      0.25      12      35 ..     343     366 ..     338     384 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 7.1e-05
                 HHHHHHHHHHHHHHHHHHHHHHH- CS
  Vac_Fusion  12 lekdfqlvikcckrvnealkRlEn 35 
                  e+ ++++++++k ++e++kRlE 
  EPX71554.1 343 NEDFHKDIAEKQKLHEERMKRLEE 366
                 5788******************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (563 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1277  (0.0712254); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.65u 0.32s 00:00:00.97 Elapsed: 00:00:00.49
# Mc/sec: 3482.92
//
Query:       EPX71555.1  [L=376]
Description: isocitrate dehydrogenase subunit 2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-98  329.8   0.1    2.3e-98  329.6   0.1    1.0  1  Iso_dh    Isocitrate/isopropylmalate dehydrogenase
  ------ inclusion threshold ------
      0.067   13.3   0.0       0.29   11.3   0.0    2.0  2  HHH_2     Helix-hairpin-helix motif


Domain annotation for each model (and alignments):
>> Iso_dh  Isocitrate/isopropylmalate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  329.6   0.1  2.5e-102   2.3e-98       2     344 ..      46     371 ..      45     375 .. 0.94

  Alignments for each domain:
  == domain 1  score: 329.6 bits;  conditional E-value: 2.5e-102
                 EEEEEESTTHHHHHHHHHHHHHHHHHHHT-EEEEEE---THHHHHHHSSSS-HHHHHHHHHSSEEEEEE---CSSSSSSHHHHHHHHHHHTTEEEEEEE CS
      Iso_dh   2 iallegdgiGpevveaalkvlkaakekaglelefeevdvGgaaidetgeplpeetleaikeadvvllgavgtpkekevrpengLlaLrkeldlfanlrp 100
                 ++++ gdgiGpe+ +++ +v+ aak   +  +e+e v+v    +++  +++pe+++e++++++v+l+g++ tp++k++ ++n  l+Lr++++lfan+rp
  EPX71555.1  46 VTMIAGDGIGPEIAKSVEQVFAAAK--VP--IEWEPVKVYP-LLKNGTTAIPEDAAESVRKNKVALKGPLATPVGKGHVSMN--LTLRRTFGLFANVRP 137
                 799******************9999..55..9******965.5566689*********************************..88************* PP

                 EE-BCCTTCCSSBTHHHHCT-EEEEEEE-SSCGGCSSEEEEETTG.GGGEEEEEEEEEHHHHHHHHHHHHHHHHHTTTSEEEEEESTTTTHHHH.HHHH CS
      Iso_dh 101 vkvfeklkvksplkrevveevdlvivReltggiYfgeekekkgsifteevavdtklyseeeieriaraafelAlkrgkkkvtlvdKanvlksse.lwrk 198
                 + ++   ++k+p+ +     v  v++Re+t+g Y+g+e+e         v++++kl++++++er++r+af++A++ gk+++t+v+Ka+++k+++ l+ +
  EPX71555.1 138 CVSI--NGYKTPYDN-----VHTVLIRENTEGEYSGIEHEVVPG-----VVQSIKLITRAASERVIRYAFQYARQVGKDNITVVHKATIMKMADgLFLD 224
                 ****..799999996.....889********************7.....8********************************************99999 PP

                 HHHHHHCCTTTTSEEEEEEHHHHHHHHHHSGGGGS..EEEE-HHHHHHHHHHHHHHTTSGCC-EEEEEETSS-EEEEESS---CCCTTSS-S-THHHHH CS
      Iso_dh 199 iveevaeeeypdielehqlvDsaamqlvkspkqfd..VivtkNlfGDilSDeaaalvGslGllpSaslgekkvaifEavHGsapdiagkdkaNpiavil 295
                 +++++a  e+pdi+l++q++D++++++v++p  ++  V+v++Nl+GDi+SD++a l+G+lGl+pS ++g k   ifEavHG+apdiagk+ aNp+a +l
  EPX71555.1 225 TAKQIAP-EFPDIKLNEQILDDTCLNIVTDPVPYNdtVMVMPNLYGDIVSDLCAGLIGGLGLTPSGNIG-KDASIFEAVHGTAPDIAGKGLANPTALLL 321
                 9999999.***********************554448********************************.67*************************** PP

                 HHHHHHHHTTT-HHHHHHHHHHHHHHHHH..TSCCHHHCTTSTCCCHHHHH CS
      Iso_dh 296 SaalmLryslgleeaAdkiekAvekvlea..givTkDlageaakevstsef 344
                 S  +mLr+ ++l+e+A+kie+A+ ++l++  + +TkDl+g+++++  t+++
  EPX71555.1 322 SSIMMLRH-MNLNEHAAKIETAIFDTLANspESRTKDLGGKSSNVEYTEAI 371
                 ********.*******************9999*********9655555555 PP

>> HHH_2  Helix-hairpin-helix motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   3.2e-05      0.29      36      59 ..      47      70 ..      32      72 .. 0.79
   2 ?   -2.0   0.0      0.45     4e+03      15      26 ..     225     236 ..     224     239 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 3.2e-05
       HHH_2 36 eLlevddiGeeiAqsivefFenek 59
                ++++ d+iG+eiA+s+ + F+  k
  EPX71555.1 47 TMIAGDGIGPEIAKSVEQVFAAAK 70
                566679**************9765 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.45
       HHH_2  15 tAklLakrFksl 26 
                 tAk++a +F ++
  EPX71555.1 225 TAKQIAPEFPDI 236
                 8********988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (376 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       336  (0.0187406); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 2584.58
//
Query:       EPX71556.1  [L=106]
Description: dpy-30 domain-containing protein Sdc1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-17   62.7   0.0    2.6e-17   62.2   0.0    1.2  1  Dpy-30    Dpy-30 motif


Domain annotation for each model (and alignments):
>> Dpy-30  Dpy-30 motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.2   0.0   1.4e-21   2.6e-17       1      41 [.       6      46 ..       6      47 .. 0.95

  Alignments for each domain:
  == domain 1  score: 62.2 bits;  conditional E-value: 1.4e-21
                -HHHHHHHHTHHHHHHHHHHHHHH--SSHHHHHHHHHHHHG CS
      Dpy-30  1 parkYLnktvaPiLlqGLtelAkeRPeDPieyLAeYLlknk 41
                p r+Y+n++v+P+Ll+G+++lA++RPe+P+++L++YLl+++
  EPX71556.1  6 PSREYINENVTPVLLEGMKILARDRPENPLQVLGHYLLEAS 46
                679***********************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1203  (0.067098); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.28s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 748.64
//
Query:       EPX71557.1  [L=396]
Description: hypothetical protein SOCG_01774 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (396 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       522  (0.0291148); expected 358.6 (0.02)
Passed bias filter:                      293  (0.0163422); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2797.33
//
Query:       EPX71558.1  [L=306]
Description: dual-specificity MAP kinase phosphatase Pmp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.8e-35  120.3   0.2    6.7e-35  119.8   0.2    1.2  1  DSPc             Dual specificity phosphatase, catalytic doma
  ------ inclusion threshold ------
      0.026   14.6   0.0      0.041   14.0   0.0    1.3  1  PTPlike_phytase  Inositol hexakisphosphate
      0.084   12.4   0.0       0.16   11.5   0.0    1.5  1  Y_phosphatase    Protein-tyrosine phosphatase


Domain annotation for each model (and alignments):
>> DSPc  Dual specificity phosphatase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.8   0.2   1.1e-38   6.7e-35       1     132 [.     108     249 ..     108     250 .. 0.94

  Alignments for each domain:
  == domain 1  score: 119.8 bits;  conditional E-value: 1.1e-38
                 EEEEECCHHCHHHHHHHTCSEEEEESSSSSEC.....ECCTTTTSEEEEECCES.........STTSCCGGGHHHHHHHHH.HHHHTT-EEEEEESSSS CS
        DSPc   1 lylgskstaslallsklgitlvinvtkevpna.....nalkkseieklripved.........ehetkiskyleeavefid.kakqkgkkvlVHCqaGi 84 
                 +yl++k+++       +++++v+nv+kev ++     ++    ++++l+i v d         eh++++  +l+++v+f+  +a   +k+vl++Cq+Gi
  EPX71558.1 108 IYLYAKPSMP----ILQSFDVVVNVAKEVVQPftsegRC-YRDSKYNLDIRVFDcleyihipwEHDSQFLIELDQLVSFVTnQALYLNKRVLINCQMGI 201
                 7999999999....8899***********9999988644.45677889999999**************************97889************** PP

                 SHHHHHHHHHHHHHHTSCHHHHHHHHHHHSTT-SSTHHHHHHHHHHHH CS
        DSPc  85 sRSatliiaYlmktknlslneayeflkerrpaispnagfirqLleyek 132
                 sRSa+l+ia++mkt nl++++aye++k+r+p+i pn+++i+qL ey++
  EPX71558.1 202 SRSACLVIAFIMKTLNLNVSDAYEYVKQRSPWIGPNMSLIFQLSEYQQ 249
                 **********************************************97 PP

>> PTPlike_phytase  Inositol hexakisphosphate
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   6.9e-06     0.041     103     153 ..     161     211 ..     120     214 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 6.9e-06
                      EEEEE-TTS---HHHHHHHHHHHHTS-T..T-EEEEE-SSSSHHHHHHHHHHH CS
  PTPlike_phytase 103 aRipitdekapeeedfdalvsilkeape..ktalvfnCqmGrgRTTtamviat 153
                        ip + + + +  ++d+lvs++ + +   ++ +++nCqmG  R+    via 
       EPX71558.1 161 IHIPWEHDSQFLI-ELDQLVSFVTNQALylNKRVLINCQMGISRSACL-VIAF 211
                      5555555555443.69********996678**************8654.4444 PP

>> Y_phosphatase  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   2.7e-05      0.16     140     193 ..     162     213 ..     127     231 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 2.7e-05
                    ESSS-.SSSSGSCCHHHHHHHHHHHHHHSTTSS-EEEECSSSSHHHHHHHHHHHH CS
  Y_phosphatase 140 ytnWp.dhgvpesaksllklirkvekskeaksgpvvVhCsaGvgRtgtfvaldil 193
                    +  W+ d++   + ++l++++++   +    ++ v++ C  G++R++++v + i+
     EPX71558.1 162 HIPWEhDSQFLIELDQLVSFVTNQALY---LNKRVLINCQMGISRSACLVIAFIM 213
                    455664444445555555555554444...599*************999876554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (306 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2174.29
//
Query:       EPX71559.1  [L=149]
Description: 40S ribosomal protein S12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.4e-27   95.2   0.8    1.8e-27   94.9   0.8    1.1  1  Ribosomal_L7Ae  Ribosomal protein L7Ae/L30e/S12e/Gadd45 famil
  ------ inclusion threshold ------
      0.077   12.9   0.1       0.13   12.1   0.1    1.4  1  PELOTA_1        PELOTA RNA binding domain


Domain annotation for each model (and alignments):
>> Ribosomal_L7Ae  Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.9   0.8   2.1e-31   1.8e-27       2      94 ..      36     129 ..      35     130 .. 0.98

  Alignments for each domain:
  == domain 1  score: 94.9 bits;  conditional E-value: 2.1e-31
                     HHHHHHHHHHHHTEEEESHHHHHHHHHTTTESEEEEETTSSSGGHHHHHHHHHHHTTEEEEEESCHHHHHHHTTSSSE.CSEEEEEESTTTHHH CS
  Ribosomal_L7Ae   2 aieevlkkakkagklvlGlkevtkalergeaklvilAedvepeekkkllealckekevpyvkvkskkeLGelvgkkrp.vsalaikdegdskdl 94 
                     +++evlk ++++++l++G++e+ kal+r++a+l++l+e++++e ++kl+ealc+e + p+vkv + k LGe++g+++  + ++a+k++g+s+++
      EPX71559.1  36 SLKEVLKRSLVHDGLARGVREASKALDRRQAHLCVLCESCDQEAYVKLIEALCAESQTPLVKVADPKVLGEWAGLCVLdRDGNARKVVGCSCVA 129
                     689****************************************************************************************986 PP

>> PELOTA_1  PELOTA RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   1.5e-05      0.13      25      70 ..      53     100 ..      40     104 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 1.5e-05
    PELOTA_1  25 gigEaTRvlLRRvPe.kvlvrd.eeepdlahlllLakekgvpveevpd 70 
                 g+ Ea ++l RR+ + +vl ++ ++e+ ++++ +L++e ++p+++v+d
  EPX71559.1  53 GVREASKALDRRQAHlCVLCEScDQEAYVKLIEALCAESQTPLVKVAD 100
                 899*********998357777744458899***********9998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       726  (0.0404931); expected 358.6 (0.02)
Passed bias filter:                      505  (0.0281667); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1151.73
//
Query:       EPX71560.1  [L=194]
Description: signal peptidase subunit Sec11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.8e-07   30.4   0.0    4.4e-07   29.7   0.0    1.4  1  Peptidase_S24  Peptidase S24-like


Domain annotation for each model (and alignments):
>> Peptidase_S24  Peptidase S24-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   0.0   2.5e-11   4.4e-07       2      52 ..      44     116 ..      43     134 .. 0.89

  Alignments for each domain:
  == domain 1  score: 29.7 bits;  conditional E-value: 2.5e-11
                    XXSSTTCCTXXTTXEEEEECTS......................---TTSEEEEEETTCE-EEEEEEEEETTE CS
  Peptidase_S24   2 vpGdSMeptlldGdlilVdkfs......................epkrGdivvfrlpgeeeayiKrviglpgd 52 
                    v ++SMep+++ Gdl++ d                          +  Gdivv  lp+ ++ +++rv++l + 
     EPX71560.1  44 VLSESMEPSFRRGDLLFLDNRKpsiekklegsepslwekiwhgsPLGIGDIVVYSLPHRPIPIVHRVVKLYES 116
                    88*****************6667899999***************************************87655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       351  (0.0195772); expected 358.6 (0.02)
Passed bias filter:                      324  (0.0180713); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.29s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 1262.18
//
Query:       EPX71561.1  [L=67]
Description: V-type ATPase V0 subunit E [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.3e-20   71.0   4.2    9.4e-20   70.8   4.2    1.0  1  ATP_synt_H      ATP synthase subunit H
  ------ inclusion threshold ------
      0.029   13.9   0.8      0.033   13.7   0.8    1.0  1  YibE_F          YibE/F-like protein
      0.032   13.5   0.4      0.034   13.4   0.4    1.0  1  MFS_Mycoplasma  Mycoplasma MFS transporter
       0.29   11.1   8.5        1.1    9.2   1.1    2.1  2  FixQ            Cbb3-type cytochrome oxidase component FixQ
       0.35   10.5   2.2       0.41   10.3   2.2    1.0  1  DUF4131         Domain of unknown function (DUF4131)


Domain annotation for each model (and alignments):
>> ATP_synt_H  ATP synthase subunit H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.8   4.2   2.6e-23   9.4e-20       2      60 ..       6      64 ..       5      65 .. 0.94

  Alignments for each domain:
  == domain 1  score: 70.8 bits;  conditional E-value: 2.6e-23
                THHHHHHHHHHHTCSCSSS-S.TTHHHHHHHHHHHHHHHHHTCHHTSSSS-SS---XXS CS
  ATP_synt_H  2 ilvgtiifavlgvvatfvvpkgenrglirvlviltavccWlfWlcvYlaQmnPLiaPil 60
                +l++ +++a+l+vv ++++pkg+n++++++++ilt+ cc+++W+++YlaQ++PL aP++
  EPX71561.1  6 VLLVGFLTALLCVVSYYFAPKGSNTNTWQMTFILTFSCCYILWAITYLAQLHPLEAPTR 64
                667778899************************************************97 PP

>> YibE_F  YibE/F-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.8   9.1e-06     0.033      44     104 ..       2      59 ..       1      64 [. 0.83

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 9.1e-06
      YibE_F  44 kgvspllvalilvilitvvtlllvngfnkktlaallgtllgvllalllallviklakltGl 104
                 +g+s+llv +++++l++v   +  +g n+ t+     t++ ++ ++ + + +++la+l+ l
  EPX71561.1   2 SGYSVLLVGFLTALLCVVSYYFAPKGSNTNTWQM---TFILTFSCCYILWAITYLAQLHPL 59 
                 79***************************99864...677777777777778877777765 PP

>> MFS_Mycoplasma  Mycoplasma MFS transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.4   9.6e-06     0.034     185     230 ..       6      52 ..       4      64 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 9.6e-06
  MFS_Mycoplasma 185 lfllgvvlvliailvvyfvgl.gtavglafvlIltFlaGlflWglqs 230
                     ++l+g++ +l+ ++  yf    +++  +++ +IltF    +lW++  
      EPX71561.1   6 VLLVGFLTALLCVVSYYFAPKgSNTNTWQMTFILTFSCCYILWAITY 52 
                     5667777777777766666552466789****************975 PP

>> FixQ  Cbb3-type cytochrome oxidase component FixQ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   1.1   0.00031       1.1      10      34 ..       3      27 ..       2      31 .. 0.91
   2 ?    6.7   1.1     0.002         7      12      29 ..      32      49 ..      30      51 .. 0.92

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00031
        FixQ 10 adswgllflvllfygvviyafrpgn 34
                ++s++l+ ++  +++vv y f p+ 
  EPX71561.1  3 GYSVLLVGFLTALLCVVSYYFAPKG 27
                599******************9985 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.002
        FixQ 12 swgllflvllfygvviya 29
                +w + f + + ++++++a
  EPX71561.1 32 TWQMTFILTFSCCYILWA 49
                89999************9 PP

>> DUF4131  Domain of unknown function (DUF4131)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   2.2   0.00012      0.41       6      51 ..       5      55 ..       2      66 .. 0.40

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00012
     DUF4131  6 alvllalllllllllllllrr.......rprrrvllllllllllallgfalra 51
                +++l+++l +ll++  ++  +       ++++ +++l + ++ ++++  +l +
  EPX71561.1  5 SVLLVGFLTALLCVVSYY--FapkgsntNTWQMTFILTFSCCYILWAITYLAQ 55
                444555555555544444..446865432222223333333333333222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       705  (0.0393218); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.35u 0.27s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 502.05
//
Query:       EPX71562.1  [L=322]
Description: hypothetical protein SOCG_01779 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.043   14.2  14.7         16    6.0   9.0    4.1  4  Snapin_Pallidin  Snapin/Pallidin
      0.055   13.6   1.8       0.14   12.3   1.8    1.6  1  Caudo_TAP        Caudovirales tail fibre assembly protein, la
      0.056   13.6   7.9       0.16   12.2   7.5    2.0  1  COG5             Golgi transport complex subunit 5
      0.056   13.5  15.9       0.16   12.0  15.9    1.8  1  TPR_MLP1_2       TPR/MLP1/MLP2-like protein
       0.13   12.4   7.2       0.29   11.2   7.2    1.7  1  DUF848           Gammaherpesvirus protein of unknown function
       0.13   11.6   3.0        0.2   11.0   3.0    1.2  1  GlnE             Glutamate-ammonia ligase adenylyltransferase
        0.2   11.4   4.9        1.3    8.8   2.9    2.3  2  OEP              Outer membrane efflux protein
       0.41   10.9  14.5      0.073   13.3   9.5    2.0  2  ATG16            Autophagy protein 16 (ATG16)
       0.43   10.4   3.9        0.9    9.3   3.9    1.6  1  Selenoprotein_S  Selenoprotein S (SelS)
        3.6    7.7  13.7        2.1    8.5   6.2    2.6  3  CREPT            Cell-cycle alteration and expression-elevate
        9.6    5.6  11.4        3.5    7.1   4.6    2.6  3  Allexi_40kDa     Allexivirus 40kDa protein


Domain annotation for each model (and alignments):
>> Snapin_Pallidin  Snapin/Pallidin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.047        76      28      71 ..      31      71 ..      26      74 .. 0.81
   2 ?    6.0   9.0    0.0098        16      16      87 ..      81     149 ..      79     164 .. 0.83
   3 ?   -0.5   0.1       1.1   1.8e+03      78      90 .]     172     184 ..     167     189 .. 0.61
   4 ?    3.8   0.0     0.046        75      12      68 ..     190     241 ..     188     244 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.047
  Snapin_Pallidin 28 sQeeLleqldrlnekLkeleeaqeaevlpdlkeyakKLvnikkr 71
                     sQe L  +++   +k++ + +++   ++ +l++  +K+++i+k 
       EPX71562.1 31 SQERL-GRISGTERKIQAILDEHA--QIIFLPKECEKVHRIRKA 71
                     55555.467888888888888888..9***************97 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.0098
  Snapin_Pallidin  16 deldeklkelrqsQeeLleqldrlnekLkeleeaqeaevlpdlkeyakKLvnikkrmsslnerlqklkkRae 87 
                      +e++e+ +  +++ ++L+e+ d ++e L++++++q    l + ke a+  +n+k  + ++n+ +++l+++++
       EPX71562.1  81 EECEERANTYKRKSKQLQEEFDFQKELLDQIKDTQA---LIQEKERAQEATNLKTLIAEVNKEISELERKLS 149
                      578888888888888999999999999998888888...888888889999999999999988888888875 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 1.1
  Snapin_Pallidin  78 rlqklkkRaekLq 90 
                       +++l++R+++Lq
       EPX71562.1 172 EIHNLEDRLLRLQ 184
                      3445555555554 PP

  == domain 4  score: 3.8 bits;  conditional E-value: 0.046
  Snapin_Pallidin  12 epkldeldeklkelrqsQeeLleqldrlnekLkeleeaqeaevlpdlkeyakKLvni 68 
                       p + +l++ +++ r++ + L+ ++ +  + ++ +++      ++d++++  KL+++
       EPX71562.1 190 RPHVSKLTKAIHAFREKESSLKFMVIQAYSGIQFYQR-----FIEDVHPHEMKLQSM 241
                      699999******************9999999985555.....555999999999987 PP

>> Caudo_TAP  Caudovirales tail fibre assembly protein, lambda gpK
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   1.8   8.8e-05      0.14      17      90 ..      74     149 ..      60     153 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 8.8e-05
   Caudo_TAP  17 keggelpesvvevsdineelkiqpkgkflvsdgeglpawvedk...keeqiqqAeqekqqllaqAseqiaplqdavd 90 
                 +++ +++e++ e ++  +  + q + +f+++ +  l ++++ +   +e+ ++q  ++ ++l+a+++++i++l+++++
  EPX71562.1  74 EQLCIWCEECEERANTYKRKSKQLQEEFDFQKE-LLDQIKDTQaliQEKERAQEATNLKTLIAEVNKEISELERKLS 149
                 677899999999994444446677777888776.5555555555999999999999****************99876 PP

>> COG5  Golgi transport complex subunit 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   7.5   9.6e-05      0.16      15      90 ..     115     189 ..      97     212 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 9.6e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXX CS
        COG5  15 nallkatnnnddteldlstplkrlnydiqeldkrlrqlitsnhleLlehlskskslss.vlselksslesLsasyer 90 
                 +al+ ++++  ++   l+t ++ +n  i+el+++l  ++ ++ ++Ll++l++  sl++   ++l+ +l +L++ y+ 
  EPX71562.1 115 QALI-QEKERAQEATNLKTLIAEVNKEISELERKLS-ILYDHRSHLLKRLQTCDSLEQtEIHNLEDRLLRLQEQYDT 189
                 4444.5888889999********************6.6677889**************99*************9984 PP

>> TPR_MLP1_2  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0  15.9    0.0001      0.16      12     119 ..      82     187 ..      80     189 .. 0.96

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.0001
  TPR_MLP1_2  12 slkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeelekelselek 110
                 + +e+++ +++k ++lqe+   q+e++ + ++   + l++ +e ++e ++l++ ++e+++ei+el+ ++  +    +   + +++  +  ++e+ +le 
  EPX71562.1  82 ECEERANTYKRKSKQLQEEFDFQKELLDQIKD--TQALIQEKERAQEATNLKTLIAEVNKEISELERKLSILYDHRSHLLKRLQTCDSLEQTEIHNLED 178
                 678999**************************..***************************************************************** PP

  TPR_MLP1_2 111 riedlneqN 119
                 r+  l+eq 
  EPX71562.1 179 RLLRLQEQY 187
                 *****9996 PP

>> DUF848  Gammaherpesvirus protein of unknown function (DUF848)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   7.2   0.00018      0.29      18     112 ..      91     184 ..      82     209 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00018
      DUF848  18 kraaVSlfDRFGgssalFekQfddarkalrsleqlkrtkeikalveavdteieakkkelslLkklnrkkvarveeLtdkvlelk.eevsleldsle 112
                 kr +  l + F  ++ l   Q +d+++ +++ e++++ +++k+l+  v++ei + +++ls+L     + ++r++  +d  ++ +  +++ +l +l+
  EPX71562.1  91 KRKSKQLQEEFDFQKELL-DQIKDTQALIQEKERAQEATNLKTLIAEVNKEISELERKLSILYDHRSHLLKRLQT-CDSLEQTEiHNLEDRLLRLQ 184
                 555555666666666654.69*****************************************9877666666544.33333221133333333333 PP

>> GlnE  Glutamate-ammonia ligase adenylyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   3.0   0.00012       0.2      11      98 ..      94     185 ..      86     207 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00012
                 -HHHHHHHHH-CHHHHHHCHCHHHTSGGGCCCHHHHHHHHTTTS-TC....HHHHHHHHHHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHHH CS
        GlnE  11 Spfvaellarrprlldelldkellaepkeleaaaaelaealaavede....eqliealRqfkreellriavadllglltveevsraLseLae 98 
                 S+ ++e    + +lld++ d+++l + ke ++ a++l+  +a+v++e    e+ +  l   +++ l r+  +d+l+  +++++ ++L +L e
  EPX71562.1  94 SKQLQEEFDFQKELLDQIKDTQALIQEKERAQEATNLKTLIAEVNKEiselERKLSILYDHRSHLLKRLQTCDSLEQTEIHNLEDRLLRLQE 185
                 777888888899**********************************9988888888888889999999*********999999999988876 PP

>> OEP  Outer membrane efflux protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   2.9   0.00077       1.3     115     168 ..      92     145 ..      74     151 .. 0.87
   2 ?    1.7   0.0      0.12     2e+02      95     122 ..     199     226 ..     194     229 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00077
         OEP 115 lqlllakeqlelaeealklaekalelaearykaGlislldvlqaqvrllqarae 168
                  + ++++e++++++e+l++ +++ +l++++ +a +++ l  l a+v+   +++e
  EPX71562.1  92 RKSKQLQEEFDFQKELLDQIKDTQALIQEKERAQEATNLKTLIAEVNKEISELE 145
                 556789********************************99*******8888877 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.12
         OEP  95 aeaqleqarqqlrlevaqaylqlllake 122
                 a   +++ + +l++ v qay +++  ++
  EPX71562.1 199 AIHAFREKESSLKFMVIQAYSGIQFYQR 226
                 5667889999*************99886 PP

>> ATG16  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   9.5   4.5e-05     0.073      57     188 ..      30     162 ..       3     165 .. 0.82
   2 ?    0.4   3.5       0.4   6.5e+02      94     139 ..     138     187 ..     125     218 .. 0.43

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 4.5e-05
       ATG16  57 sakekeasasq.......snskqsakiqsleqklaqlreelaelyksrgelaqrllelneelqkleeklkedeerlaeleaeraaletklkdreeelre 148
                 s+        q        ++++ + i + +++++ l +e +++++ r  l ++l    ee +++ ++ k+++++l+e  +  ++l +++kd ++ ++e
  EPX71562.1  30 SS--------QerlgrisGTERKIQAILDEHAQIIFLPKECEKVHRIRKALGEQLCIWCEECEERANTYKRKSKQLQEEFDFQKELLDQIKDTQALIQE 120
                 12........1233444346677788899999999**************************************************************** PP

       ATG16 149 keklvq..dlqDElsaLqlqlnqaEeklrklekENkeLveRW 188
                 ke++ +  +l+  ++  + + + +E kl  l +  ++L++R+
  EPX71562.1 121 KERAQEatNLKTLIAEVNKEISELERKLSILYDHRSHLLKRL 162
                 ***9987789999***************99999999999996 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.4
       ATG16  94 yksrgelaqrllel....neelqkleeklkedeerlaeleaeraaletkl 139
                  k+ +el+ +l  l    +  l++l++  + +++++++le++  +l++++
  EPX71562.1 138 NKEISELERKLSILydhrSHLLKRLQTCDSLEQTEIHNLEDRLLRLQEQY 187
                 22222222222222000022233444444445555555555555555553 PP

>> Selenoprotein_S  Selenoprotein S (SelS)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   3.9   0.00056       0.9      73     146 ..      60     132 ..      27     149 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00056
  Selenoprotein_S  73 ldpdvvvkrqealeaaRlrmqeeldakaekfkekkkqleeekRrqkiemWesmkeGksykgkaklaqeeteetg 146
                       + ++v +  +al      + ee + +a+ +k k kql+ee   qk e  ++ k+ ++  ++  +aqe t+  +
       EPX71562.1  60 KECEKVHRIRKALGEQLCIWCEECEERANTYKRKSKQLQEEFDFQK-ELLDQIKDTQALIQEKERAQEATNLKT 132
                      6788999999999999999**********************98887.888999998888888777777776544 PP

>> CREPT  Cell-cycle alteration and expression-elevated protein in tumour
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   7.4    0.0039       6.3      24     123 ..      55     151 ..      46     168 .. 0.76
   2 ?    8.5   6.2    0.0013       2.1      36     112 ..     117     193 ..     108     203 .. 0.86
   3 ?    2.7   0.7     0.082   1.3e+02      57     142 ..     173     257 ..     160     260 .. 0.64

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0039
       CREPT  24 iaklPpevsdvsllekikdkeeaekllkqveealellaeY...nkrLeaeleeRkklakmledfleaqkellakaeekleelkeklekvksvrkelksh 119
                 i  lP+e ++v+ ++k    + +e+l    ee+ e  + Y    k+L++e +  k+l  +++d +++++e+  + ++++++lk+ +++v+++ +el+++
  EPX71562.1  55 IIFLPKECEKVHRIRK----ALGEQLCIWCEECEERANTYkrkSKQLQEEFDFQKELLDQIKDTQALIQEK--ERAQEATNLKTLIAEVNKEISELERK 147
                 5567777777666665....445566666666666666662225789999999999999999999999885..667788899999***********999 PP

       CREPT 120 iqsL 123
                 ++ L
  EPX71562.1 148 LSIL 151
                 8866 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0013
       CREPT  36 llekikdkeeaekllkqveealellaeYnkrLeaeleeRkklakmledfleaqkellakaeekleelkeklekvksv 112
                 l+++ +  +ea++l + + e  + ++e   +L+   ++R++l k l++  ++ ++++++ e +l +l+e+ ++  +v
  EPX71562.1 117 LIQEKERAQEATNLKTLIAEVNKEISELERKLSILYDHRSHLLKRLQTCDSLEQTEIHNLEDRLLRLQEQYDTRPHV 193
                 455556789999*******************************************************9998876555 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.082
       CREPT  57 lellaeYnkrLeaeleeRkklakmledfleaqkellakaeekleelkeklekvksvrkelkshiqsLPdLtelpdvtgglapLPsa 142
                 ++ l++   rL+++ + R +++k+ +++++  +e+ +  + ++ +  + ++  +   ++++ h   L +++    ++++  +LP a
  EPX71562.1 173 IHNLEDRLLRLQEQYDTRPHVSKLTKAIHA-FREKESSLKFMVIQAYSGIQFYQRFIEDVHPHEMKLQSMSMSTGISKARPQLPEA 257
                 5678888899********999886665554.4444444444444444556666666666666666666666434466666666666 PP

>> Allexi_40kDa  Allexivirus 40kDa protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.1     0.082   1.3e+02     230     270 ..      55      97 ..      30      98 .. 0.78
   2 ?    7.1   4.6    0.0022       3.5      71     160 ..     114     203 ..     101     219 .. 0.47
   3 ?   -2.5   0.1       1.8   2.9e+03      73     133 ..     240     302 ..     225     319 .. 0.54

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.082
  Allexi_40kDa 230 alLlsdeietkhklqkplsDsLaLlhqkCpn..fiykirdegL 270
                    ++l  e e  h+++k l++ L++  ++C++    yk ++++L
    EPX71562.1  55 IIFLPKECEKVHRIRKALGEQLCIWCEECEEraNTYKRKSKQL 97 
                   4678999**********************86224677777765 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0022
  Allexi_40kDa  71 vsllsqttlLselrdalrtltkll.dklksvekklelsaetasdskllkklesiet.sleelhakldelsssetsesegPsssptkassaea 160
                   +++l q+++ ++  ++l+tl  ++ ++++++e+kl++  +  + s+llk+l++ +  +  e+h+  d+l + +++  ++P++s+ +++ +  
    EPX71562.1 114 TQALIQEKERAQEATNLKTLIAEVnKEISELERKLSILYD--HRSHLLKRLQTCDSlEQTEIHNLEDRLLRLQEQYDTRPHVSKLTKAIHAF 203
                   3333333333333333333322220233333333333332..23344444444433111456665666677777777777777766666555 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 1.8
  Allexi_40kDa  73 llsqttlLselrdalrtltk..lldklksvekklelsaetasdskllkklesietsleelhak 133
                   ++s++t +s+ r +l + ++  ++  l+s+ ++ +   e a +++    +  +e+++    +k
    EPX71562.1 240 SMSMSTGISKARPQLPEAERleIVTLLSSILHSFKSALEVAISNNWKPIIVLLEQDIVLYEEK 302
                   556666666666655544431134455555555555555555444444444455555444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2245  (0.125216); expected 358.6 (0.02)
Passed bias filter:                      721  (0.0402142); expected 358.6 (0.02)
Passed Vit filter:                        94  (0.0052429); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.67u 0.29s 00:00:00.96 Elapsed: 00:00:00.48
# Mc/sec: 2006.10
//
Query:       EPX71563.1  [L=998]
Description: serine protease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-31  108.4   0.0    5.7e-26   90.3   0.0    3.1  3  PDZ_1          PDZ-like domain
    2.1e-14   54.7   0.0    4.3e-14   53.7   0.0    1.6  1  Trypsin_2      Trypsin-like peptidase domain
    2.1e-10   40.8   0.0      0.012   15.9   0.0    3.5  3  PDZ            PDZ domain
    4.1e-09   36.1   0.4      0.025   14.4   0.0    3.7  3  PDZ_6          PDZ domain
    3.7e-05   24.0   0.0        2.2    8.6   0.0    3.5  3  PDZ_2          PDZ domain
  ------ inclusion threshold ------
       0.89    8.1   2.5       0.98    8.0   0.4    1.8  2  Peptidase_S46  Peptidase S46


Domain annotation for each model (and alignments):
>> PDZ_1  PDZ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.3   0.0   1.9e-29   5.7e-26       2      78 .]     395     470 ..     394     470 .. 0.98
   2 ?   -2.1   0.0       1.4     4e+03      33      69 ..     798     836 ..     792     839 .. 0.65
   3 !   14.5   0.0   9.2e-06     0.027       6      77 ..     868     944 ..     865     945 .. 0.67

  Alignments for each domain:
  == domain 1  score: 90.3 bits;  conditional E-value: 1.9e-29
       PDZ_1   2 itpsrfvevaGatfhdLsyqlarsyaipvk.gvyvseasgsfklsskekkgviitsinnqptpnLdefievvkkipdn 78 
                 +tpsrf+e++Ga++hdLsyqlarsy++p++ g+yv+ asg++++ss  ++++++t+++n+ptpnLd+fi+vv+++ dn
  EPX71563.1 395 VTPSRFLEIGGAILHDLSYQLARSYQFPLNsGTYVA-ASGMLNWSS-GSRDFLVTKLANKPTPNLDAFIQVVSNLADN 470
                 7***********************************.*******99.9***************************997 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.4
       PDZ_1  33 vyvseasgsfklsskekkgviitsinnq...ptpnLdefi 69 
                 ++vs+ +  ++ ss  + g ++ s+n++    +++L ef 
  EPX71563.1 798 YVVSHLKPLPEDSS-LRVGDVLISVNGKmitRVSDLHEFE 836
                 55666666666666.8888899999998222456666665 PP

  == domain 3  score: 14.5 bits;  conditional E-value: 9.2e-06
       PDZ_1   6 rfvevaGatfhdLsyqlarsyaipvk......gvyvsea.sgsfklsskekkgviitsinnqptpnLdefievvkkipd 77 
                 +++++ Ga++h  +++ +    +p        gvyv +   gs++l+     ++i+  i+++p+ n ++f+++v++ip 
  EPX71563.1 868 EVISWNGAIVHS-THRSVYEQVEPGVelpgpdGVYVGSIlYGSPALNLLRAAHWIV-AIDGKPVNNFSDFKKIVSEIPS 944
                 566777777777.7766665544322233447888865414566665545566665.7*******************96 PP

>> Trypsin_2  Trypsin-like peptidase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.7   0.0   1.4e-17   4.3e-14       1     150 []     100     246 ..     100     246 .. 0.85

  Alignments for each domain:
  == domain 1  score: 53.7 bits;  conditional E-value: 1.4e-17
   Trypsin_2   1 GsGflvgsd.glilTnaHvvdsadgaavkaikkkveeagadgrevpakvvaadpelDlAllkv..ssderaglpplplgpsealkggepvyvvGyplgg 96 
                 ++Gf+v++  glil n+Hvv++   +a         +a+ +++ev+  ++++dp +D+ +++   ss +    + +pl+p+  +k+g ++ ++G+ + g
  EPX71563.1 100 ATGFVVNKKlGLILSNRHVVSPGPITAR--------AAFINYEEVDIYPLYRDPVHDFGFFRYdpSSLRYHVADEIPLAPE-LAKVGLDIRIIGN-DAG 188
                 69*******66**********9999999........9**************************543333333444447775.566666*******.777 PP

   Trypsin_2  97 eksgsvssGivsgvve...sesaasgegesfl..qtdaatspGsSGGplfdsdGrvvGl 150
                 ek  s+ s +++++++   +++ +++++ + +  q+++ ts+GsSG+p++d  G  v+l
  EPX71563.1 189 EKL-SILSSTLARLDRpapNYGIDNYNDFNTFyyQAASGTSGGSSGSPVLDISGAAVAL 246
                 776.9***********99999999999999888999999************99999986 PP

>> PDZ  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.1   0.0    0.0023       6.9      28      52 ..     319     342 ..     296     355 .. 0.84
   2 !   15.9   0.0   4.1e-06     0.012      38      66 ..     806     834 ..     783     845 .. 0.79
   3 !   13.4   0.0   2.5e-05     0.076      25      63 ..     897     934 ..     883     942 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0023
                 EEEEEECTTSHHHHHTSSTTEEEEE CS
         PDZ  28 ifvsevlpggaaeadglkvGDkIls 52 
                 ++vs+vl+g+ a+   l++GD++++
  EPX71563.1 319 LVVSKVLRGSEAAGV-LEPGDILIA 342
                 79*******988888.*******96 PP

  == domain 2  score: 15.9 bits;  conditional E-value: 4.1e-06
                 HHHHHTSSTTEEEEEETTEETTTSHHHHH CS
         PDZ  38 aaeadglkvGDkIlsvNgvdvenvsheea 66 
                  +e + l+vGD+++svNg+ ++ vs+++ 
  EPX71563.1 806 LPEDSSLRVGDVLISVNGKMITRVSDLHE 834
                 344444****************9998765 PP

  == domain 3  score: 13.4 bits;  conditional E-value: 2.5e-05
                 SSSEEEEEECTTSHHHHHTSSTTEEEEEETTEETTTSHH CS
         PDZ  25 dkgifvsevlpggaaeadglkvGDkIlsvNgvdvenvsh 63 
                   g++v ++l g++a    l++ + I++++g++v+n+s+
  EPX71563.1 897 PDGVYVGSILYGSPALNL-LRAAHWIVAIDGKPVNNFSD 934
                 469***************.*****************987 PP

>> PDZ_6  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.7   0.1    0.0045        14       1      24 [.     320     342 ..     320     345 .. 0.84
   2 !   14.4   0.0   8.3e-06     0.025      16      38 ..     812     832 ..     809     835 .. 0.89
   3 !   11.6   0.0   6.5e-05      0.19       2      43 ..     902     940 ..     898     950 .. 0.87

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0045
       PDZ_6   1 vVtaVdpgsPAdrAG.lrvGDiils 24 
                 vV+ V  gs A+  G l++GDi+++
  EPX71563.1 320 VVSKVLRGSEAA--GvLEPGDILIA 342
                 578888888888..99*******98 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 8.3e-06
       PDZ_6  16 lrvGDiilsvNGqpveglsladv 38 
                 lrvGD+++svNG+ +  + + d+
  EPX71563.1 812 LRVGDVLISVNGKMI--TRVSDL 832
                 8**************..888876 PP

  == domain 3  score: 11.6 bits;  conditional E-value: 6.5e-05
       PDZ_6   2 VtaVdpgsPAdrAGlrvGDiilsvNGqpveglsladvaallr 43 
                 V ++  gsPA +  lr+   i++++G+pv   +  d++ ++ 
  EPX71563.1 902 VGSILYGSPALNL-LRAAHWIVAIDGKPV--NNFSDFKKIVS 940
                 6677779******.***************..99999998876 PP

>> PDZ_2  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.036   1.1e+02      13      40 ..     315     342 ..     298     367 .. 0.77
   2 !    8.6   0.0   0.00075       2.2      28      54 ..     808     834 ..     787     856 .. 0.81
   3 !    7.5   0.0    0.0017       5.1      14      77 ..     898     961 ..     886     965 .. 0.79

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.036
                 ..-EEEEE.E-TTSGGGGT.--TT-EEEE CS
       PDZ_2  13 tggvlvvs.VkeggPaakaglkagDvilk 40 
                 ++g+lvvs V  g+ aa+  l++gD++++
  EPX71563.1 315 SNGLLVVSkVLRGSEAAGV-LEPGDILIA 342
                 446666655****998888.******975 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00075
                 GGT.--TT-EEEEETTB--SSHHHHHH CS
       PDZ_2  28 akaglkagDvilkvdgkkvksledlis 54 
                 +++ l+ gDv+++v+gk ++  +dl++
  EPX71563.1 808 EDSSLRVGDVLISVNGKMITRVSDLHE 834
                 45569**************99999873 PP

  == domain 3  score: 7.5 bits;  conditional E-value: 0.0017
                 .-EEEEEE-TTSGGGGT.--TT-EEEEETTB--SSHHHHHHHHHTS-TT-EEEE.EEEETTEEEE CS
       PDZ_2  14 ggvlvvsVkeggPaakaglkagDvilkvdgkkvksledlislllkkkpGdtVkl.tvlRdgkkkt 77 
                  gv+v s+  g+Pa +  l+a   i+++dgk+v++ +d+++ +++      V++ ++ R+g ++ 
  EPX71563.1 898 DGVYVGSILYGSPALNL-LRAAHWIVAIDGKPVNNFSDFKKIVSEIPSEPYVQVkQMNRRGATLL 961
                 4899999999***8776.********************999888777777777633556666555 PP

>> Peptidase_S46  Peptidase S46
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1      0.14   4.1e+02      45      67 ..      95     119 ..      72     122 .. 0.80
   2 ?    8.0   0.4   0.00033      0.98     629     672 ..     225     268 ..     210     271 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.14
                    ETTTEE-EE-STT..-EEEE-HHHH CS
  Peptidase_S46  45 flggCtasfVSpe..GLvlTNHHCa 67 
                     +g+C   fV ++  GL+l N H++
     EPX71563.1  95 AGGFCATGFVVNKklGLILSNRHVV 119
                    389**9888876557********97 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.00033
                    ----TT-TT-EEE-TTS-EEEEEEEE-GGGTTTTT---TTT--E CS
  Peptidase_S46 629 nDitGGNSGSPvlngkgelvGlaFDgnieslsgdilfdpelqRa 672
                      + GG SGSPvl+ +g  v l+  g   s s+ +l  +++ Ra
     EPX71563.1 225 SGTSGGSSGSPVLDISGAAVALNSGGSNSSASSFYLPLNRIVRA 268
                    5689******************9999888887777666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (998 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       367  (0.0204696); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.70u 0.25s 00:00:00.95 Elapsed: 00:00:00.42
# Mc/sec: 7105.05
//
Query:       EPX71564.1  [L=477]
Description: poly(A) polymerase Cid11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.4e-17   62.0   0.0      1e-16   60.9   0.0    1.6  1  PAP_assoc     Cid1 family poly A polymerase
    0.00016   21.9   0.0     0.0003   21.0   0.0    1.5  1  NTP_transf_2  Nucleotidyltransferase domain
     0.0018   18.4   0.0     0.0042   17.1   0.0    1.6  1  Polbeta       Polymerase beta, Nucleotidyltransferase


Domain annotation for each model (and alignments):
>> PAP_assoc  Cid1 family poly A polymerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.9   0.0   1.7e-20     1e-16       1      61 [.     263     318 ..     263     319 .. 0.94

  Alignments for each domain:
  == domain 1  score: 60.9 bits;  conditional E-value: 1.7e-20
                 -HHHHHHHHHHHHHHT--TTTEEEECSST-EEEHHHHCGCS-SSEECESSSSEBEETTCCC CS
   PAP_assoc   1 sLGeLLigFFeyYgreFdyenvvisirtggiltkkekgwesaeskernrfllaIeDPfeld 61 
                 sLG+LL++FF+yYg  +dy+++v+s+r g +++k+ kgw++        + l++e+Pf+++
  EPX71564.1 263 SLGDLLVDFFRYYGFVYDYKESVVSVRSGSLISKRAKGWNM-----DMNNSLCVEEPFNTS 318
                 7***************************************6.....45789*******987 PP

>> NTP_transf_2  Nucleotidyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.0   5.1e-08    0.0003       3      44 ..      73     116 ..      71     181 .. 0.82

  Alignments for each domain:
  == domain 1  score: 21.0 bits;  conditional E-value: 5.1e-08
                   HHHHHHHHHTT..TSEEEEEHHHHCTTSCTTSSEEEEEEESTTC CS
  NTP_transf_2   3 klleelkelep..vakvvlfGSyarGtalkgSDiDllvvlpeev 44 
                   kl+++lk   p  + ++++fGS++  +a  +SDiD+++v++ + 
    EPX71564.1  73 KLKTILKNSIPdnNLDLFVFGSTESRLAIHQSDIDVCIVTRGNG 116
                   788888888888899************************99884 PP

>> Polbeta  Polymerase beta, Nucleotidyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0     7e-07    0.0042      14      58 ..      87     131 ..      73     147 .. 0.77

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 7e-07
                 HSTTEEEEEE-S------EEEEEEEESS---HHHHHHHHHHHHHH CS
     Polbeta  14 elaylFGSrakgkareeSDiDlavllkekldleeelelaaeledi 58 
                   +++FGS  +  a ++SDiD++++++ + +l   ++la  l++ 
  EPX71564.1  87 LDLFVFGSTESRLAIHQSDIDVCIVTRGNGQLRSTCQLAYILHNC 131
                 4479************************98888888887766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (477 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       449  (0.0250432); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 3263.72
//
Query:       EPX71565.1  [L=419]
Description: vacuolar amino acid efflux transporter Avt8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-79  268.1  36.7    1.2e-79  267.9  36.7    1.0  1  Aa_trans  Transmembrane amino acid transporter protein
  ------ inclusion threshold ------
        5.9    6.7   7.0        1.2    9.0   0.3    3.0  3  ORMDL     ORMDL family


Domain annotation for each model (and alignments):
>> Aa_trans  Transmembrane amino acid transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  267.9  36.7   1.4e-83   1.2e-79       3     409 .]      19     409 ..      17     409 .. 0.94

  Alignments for each domain:
  == domain 1  score: 267.9 bits;  conditional E-value: 1.4e-83
    Aa_trans   3 ssalsavlnlikaivGaGvLaLPyAfkqlGlivGlillllvallslytlllLvkcsktlasgkrnksYgdlgyrllGpkgkliidlailvqlfGvgvsy 101
                 ++++s+v+nl+++i GaG+L+++ Af+++ l++G +++++ a++s+++l+  + c++ l+  ++++s+++++++++ + + +++d ai++++fGv++sy
  EPX71565.1  19 AGFFSSVINLANTILGAGILSMSHAFTKTSLFFGCLTIFFSAFASFLGLYFVSLCADRLP--RGKASFAAVAKHTFPS-LAIVFDSAIAIKCFGVSISY 114
                 57899******************************************************9..9*************77.9******************* PP

    Aa_trans 102 liligdllpaifesffdt..lllsnvyfilisaliiipLslipnlskLsylSllalvsslyyivilvlvvaelvklelkgvseetvkkasklkglflai 198
                 l+++gdl+p+i +s+ +t     ++ ++i++s +++ pL++++ l++L+ +S+++l+s+ y ++++v++++ ++ +e  ++ +       +l+g+++ +
  EPX71565.1 115 LVIVGDLMPQIAPSIGFTasIFEHRETWIIVSIVVLTPLAFLRRLDSLRHTSFISLISLSY-LMVIVIYHFIKGDMERGEIRYFRP---ESLSGYLSVL 209
                 ***************999655559***********************************87.899999****************98...6667****** PP

    Aa_trans 199 giivFAftghavlleiqnelkdpskfkkmtkvlllsiilatvlyilvGlvGYltFGnevkgnillnlpkssilivivnlllvlhlilsfplqlhplrqv 297
                 +++vF ft+h + ++++ne+k+ps+   + + l  ++  +++ly++v+ +GYl FG+ + gni+  ++  s+li++++l++v+ +++s+plq+hp+r +
  EPX71565.1 210 PVFVFGFTCHQNAFSVINEVKTPSH-GFINFTLFSAVFSSMILYLIVAITGYLSFGSLTSGNIIAMYDDGSFLITFGKLAIVILVLFSYPLQCHPCRNS 307
                 *************************.7799999999999******************************99**************************** PP

    Aa_trans 298 venllikkeavagasekeapkskllrlvirlllvvityliAlsvpslakvlslvGatsstplsfilPalfhlkliktekksleklvkkkildlicivlg 396
                 + + +++        +     s+  + v++l+++++++liAls +sl+ vl++vG+t+st++sf+lP+l+++    +   + +   k+ ++  i+ ++ 
  EPX71565.1 308 LYQAIRRS-------YSSHDMSNRYHTVLTLCILLTSLLIALSLSSLELVLAFVGSTGSTFISFVLPGLLYYFFSHNAVSPNSASEKQ-LK--ITRFVA 396
                 *****885.......6666666789**************************************************9999888888765.44..888888 PP

    Aa_trans 397 lllvfyglavlil 409
                 + l++yg++v+il
  EPX71565.1 397 ACLAIYGISVMIL 409
                 9999*******95 PP

>> ORMDL  ORMDL family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.3   0.00013       1.2       6      60 ..     135     188 ..     131     196 .. 0.88
   2 ?    0.1   0.2     0.074   6.6e+02      91     111 ..     205     225 ..     200     258 .. 0.83
   3 ?   -3.4   0.1      0.84   7.5e+03      21      25 ..     331     335 ..     318     364 .. 0.56

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00013
       ORMDL   6 wvnskglwviyiviilllkllllalpgvseevawtltnlvhnlvtyillHwikGt 60 
                  ++++ +w+i  +++l+   +l+ l  + +    +l+ l++ +v  ++ H ikG+
  EPX71565.1 135 IFEHRETWIIVSIVVLTPLAFLRRLDSLRHTSFISLISLSYLMVI-VIYHFIKGD 188
                 578899***********************************9986.667*****7 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.074
       ORMDL  91 fLtvvPivLfllsthytkydl 111
                 +L v+P+++f  ++h + +++
  EPX71565.1 205 YLSVLPVFVFGFTCHQNAFSV 225
                 799999999999999888765 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 0.84
       ORMDL  21 lllkl 25 
                 l++ l
  EPX71565.1 331 LCILL 335
                 22222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (419 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       940  (0.052429); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.23s 00:00:00.77 Elapsed: 00:00:00.40
# Mc/sec: 3130.76
//
Query:       EPX71566.1  [L=443]
Description: histone deacetylase complex subunit Cti6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.6e-09   35.3   7.5    1.4e-08   34.5   7.5    1.4  1  PHD         PHD-finger
     0.0053   16.3   6.4     0.0094   15.5   6.4    1.4  1  PHD_2       PHD-finger
  ------ inclusion threshold ------
      0.061   13.2   2.2       0.13   12.1   2.2    1.5  1  PHD_Oberon  PHD - plant homeodomain finger protein


Domain annotation for each model (and alignments):
>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.5   7.5   2.3e-12   1.4e-08       1      51 [.      49     101 ..      49     102 .. 0.81

  Alignments for each domain:
  == domain 1  score: 34.5 bits;  conditional E-value: 2.3e-12
                 SBTTTTS.....TTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSSTBSSTTTHT CS
         PHD   1 rCavCkk.....ksdeeeelvqCdgCkrwfHqkClkppleseekpegewlCekCke 51 
                 rC vC+      +s +++  +qCd+C+ w+H  C+++++e +++p + ++Ce C++
  EPX71566.1  49 RC-VCGIednddESSDGGLYIQCDQCSVWQHGHCVGFQEE-SDVP-DVYFCEVCRP 101
                 58.9988765544555999*******************98.4444.48******97 PP

>> PHD_2  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   6.4   1.6e-06    0.0094       4      36 .]      67     100 ..      65     100 .. 0.91

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.6e-06
       PHD_2   4 llsCdkCsvaVHasCYGvskesdgee.WlCrrCe 36 
                  ++Cd+Csv  H +C G+++esd  + + C+ C+
  EPX71566.1  67 YIQCDQCSVWQHGHCVGFQEESDVPDvYFCEVCR 100
                 599********************877899***96 PP

>> PHD_Oberon  PHD - plant homeodomain finger protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   2.2   2.2e-05      0.13      28      69 ..      48      82 ..      25     107 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.2e-05
  PHD_Oberon 28 keCsCviCskfddekdtsswikCeevvseediCghvcHldCa 69
                 +C+C i  + d+++d+ ++i+C       d C+++ H +C 
  EPX71566.1 48 TRCVCGIEDNDDESSDGGLYIQC-------DQCSVWQHGHCV 82
                69*********************.......89********94 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (443 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1204  (0.0671538); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 3111.51
//
Query:       EPX71567.1  [L=56]
Description: 40S ribosomal protein S29 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.6e-15   55.9   1.2    2.9e-15   55.7   1.2    1.0  1  Ribosomal_S14  Ribosomal protein S14p/S29e
  ------ inclusion threshold ------
      0.026   14.2   0.0      0.026   14.2   0.0    1.0  1  Terpene_synth  Terpene synthase, N-terminal domain


Domain annotation for each model (and alignments):
>> Ribosomal_S14  Ribosomal protein S14p/S29e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.7   1.2   3.3e-19   2.9e-15       2      54 .]       7      56 .]       6      56 .] 0.97

  Alignments for each domain:
  == domain 1  score: 55.7 bits;  conditional E-value: 3.3e-19
                   ------SS..CTTT---SSS--SSSEE-GGG-..EHHHHHHHTTT...TT-EE-- CS
  Ribosomal_S14  2 laklprnssptrirnrCrvtGrprGvirkfgL..sRicfRelAlkgelpGvkKaS 54
                   ++++pr    ++++++C+ tGr+ G+irk+gL  sR+ fRe+A++   +G+ K++
     EPX71567.1  7 WNSHPRRF--GKGSRQCAHTGRRLGLIRKYGLniSRQSFREFAND---IGFYKYR 56
                   9*******..***********************************...*****95 PP

>> Terpene_synth  Terpene synthase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   2.9e-06     0.026      97     130 ..      20      52 ..       3      56 .] 0.78

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.9e-06
                    BHHHHHHHHHHHHHTT----GGGGGGGE.ETT.. CS
  Terpene_synth  97 dletvAlaFrLLRqhGydvssdvFkkFkdeegnf 130
                    ++ ++  +  L R++G ++s ++F++F+++ g f
     EPX71567.1  20 QCAHTGRRLGLIRKYGLNISRQSFREFANDIG-F 52 
                    6677778888******************9988.3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       217  (0.0121033); expected 358.6 (0.02)
Passed bias filter:                      195  (0.0108762); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.25s 00:00:00.60 Elapsed: 00:00:00.41
# Mc/sec: 408.56
//
Query:       EPX71568.1  [L=83]
Description: 40S ribosomal protein S27 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.3e-29   98.9   5.3    1.2e-28   98.6   5.3    1.2  1  Ribosomal_S27e  Ribosomal protein S27
  ------ inclusion threshold ------
      0.039   13.5   2.8      0.061   12.8   2.8    1.3  1  TF_Zn_Ribbon    TFIIB zinc-binding


Domain annotation for each model (and alignments):
>> Ribosomal_S27e  Ribosomal protein S27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.6   5.3   1.3e-32   1.2e-28       1      55 []      28      82 ..      28      82 .. 0.99

  Alignments for each domain:
  == domain 1  score: 98.6 bits;  conditional E-value: 1.3e-32
                    -S--EEEEE-TTTS-EEEEESS-SS-EEESSSTCEEEEECSSSEEESSCEEEEES CS
  Ribosomal_S27e  1 prskFldvkCpdCenetvvFshaatvvkCisCgkvLvePtGGkaklkaqilerlk 55
                    prs+F+dvkCp+C+n+t+vFsha+tvv C sC++vL++PtGGka+l +++++r+k
      EPX71568.1 28 PRSFFMDVKCPGCFNITTVFSHAQTVVICGSCASVLCQPTGGKARLMEGCSFRRK 82
                    89***************************************************97 PP

>> TF_Zn_Ribbon  TFIIB zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   2.8   6.8e-06     0.061       2      29 ..      36      63 ..      35      65 .. 0.94

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 6.8e-06
                  EETTTTCEECHEETSTTCEEESSSSBEE CS
  TF_Zn_Ribbon  2 kCPnCgstnlveDpergelvCtdCGlVl 29
                  kCP C + ++v+ ++++ ++C++C +Vl
    EPX71568.1 36 KCPGCFNITTVFSHAQTVVICGSCASVL 63
                  9******889****************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       522  (0.0291148); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.23s 00:00:00.57 Elapsed: 00:00:00.38
# Mc/sec: 648.85
//
Query:       EPX71569.1  [L=360]
Description: RecA family ATPase Rlp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.025   14.1   0.0      0.045   13.3   0.0    1.4  1  PSY3      Shu complex component Psy3, DNA-binding description
      0.055   13.5   0.0       0.68   10.0   0.0    2.3  2  AAA_14    AAA domain
      0.068   12.9   0.0       0.15   11.9   0.0    1.5  1  HCV_NS4a  Hepatitis C virus non-structural protein NS4a


Domain annotation for each model (and alignments):
>> PSY3  Shu complex component Psy3, DNA-binding description
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   7.5e-06     0.045     129     198 ..     247     322 ..     237     348 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 7.5e-06
        PSY3 129 dkqLsgilidNlS.yl.ssepks....klklLlkllkklrktfgcwvittsygleyyeGienslstlvrsssikkk 198
                 + +L+ i++d lS ++ + + +      + +L + l++  k +gc v+ t + l+ +  +  sl+t+ ++   +++
  EPX71569.1 247 KMRLAYIFVDGLSsFYwQVRLERgygkRYLELERKLRNASKMLGCRVVCTNWCLNGKAHLPMSLKTFRTERRAHTR 322
                 4589*********966344444477779*********************998887766666666666666665555 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   0.00011      0.68       3      62 ..      51     107 ..      49     115 .. 0.77
   2 ?    0.8   0.0     0.078   4.7e+02      63      82 ..     156     175 ..     124     187 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00011
      AAA_14   3 kilvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelileklke 62 
                 +++ i+G+  +GKT +l++l+ + lvk+ ++l + +++e d +++   +ll+++ ekl +
  EPX71569.1  51 EVYGIEGISCSGKTEVLYHLAGNALVKSTETLVLVVNSEWDWNQE---RLLQVLHEKLIQ 107
                 6889*********************99999999999888875433...356777776433 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.078
      AAA_14  63 ekktylflDEiqevpeweka 82 
                 +++t   +DE q ++ w++ 
  EPX71569.1 156 KGETTKAIDEKQTCRIWKRS 175
                 4778889*******999874 PP

>> HCV_NS4a  Hepatitis C virus non-structural protein NS4a
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   2.4e-05      0.15      19      35 ..     288     304 ..     285     321 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 2.4e-05
    HCV_NS4a  19 ttGSvvvvtrwsvnGkg 35 
                 + G+ vv+t+w +nGk+
  EPX71569.1 288 MLGCRVVCTNWCLNGKA 304
                 67**************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       773  (0.0431145); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.21s 00:00:00.68 Elapsed: 00:00:00.37
# Mc/sec: 2885.37
//
Query:       EPX71570.1  [L=185]
Description: non classical export pathway protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.1e-20   71.7  14.6    7.7e-20   71.4  14.6    1.1  1  MARVEL    Membrane-associating domain


Domain annotation for each model (and alignments):
>> MARVEL  Membrane-associating domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.4  14.6   4.3e-24   7.7e-20       8     143 ..      13     147 ..       9     148 .. 0.87

  Alignments for each domain:
  == domain 1  score: 71.4 bits;  conditional E-value: 4.3e-24
      MARVEL   8 ilrilqlvfaiiilgliasliakldqllgspssalnfavfvavfsflyalfllvlylfknsaftsil.wplidlivdalaallwlvafialaaglrdis 105
                  +ri+ql+ a i+l+l+a+l++++ ++ g++++++n++vfv++fs+l+++++ + +     ++++i    ++  ++d+l++++ l+a++ +a+++r +s
  EPX71570.1  13 PMRIFQLAIATICLALAAALVDQQ-GGNGHSPGKINYCVFVGCFSILTFFLTALGA-----FWPNIVgNVYLIAAYDLLNWIFLLTAGVCIAVAIRVHS 105
                 58*******************555.7999******************966665554.....57776626788899************************ PP

      MARVEL 106 cafe....snqysasltvrcgqaqaavafgflavllfaasav 143
                 ca++    sn     +++rc+++ a ++f ++ + l+++s++
  EPX71570.1 106 CANRdflnSNHFIQGSGKRCRELRALCFFLWFLFGLYLVSFI 147
                 **555667778888889**********************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       659  (0.0367561); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.29s 00:00:00.76 Elapsed: 00:00:00.47
# Mc/sec: 1184.75
//
Query:       EPX71571.1  [L=826]
Description: Vid27 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   7.3e-175  581.2   0.3   9.8e-175  580.8   0.3    1.1  1  VID27     VID27 C-terminal WD40-like domain
    4.9e-56  189.3   1.5    4.9e-56  189.3   1.5    3.5  3  VID27_N   VID27 N-terminal region
    6.2e-39  132.7   6.4    1.7e-38  131.2   5.1    2.3  2  VID27_PH  VID27 PH-like domain


Domain annotation for each model (and alignments):
>> VID27  VID27 C-terminal WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  580.8   0.3  1.6e-178  9.8e-175       1     354 [.     459     811 ..     459     813 .. 0.99

  Alignments for each domain:
  == domain 1  score: 580.8 bits;  conditional E-value: 1.6e-178
       VID27   1 eknsqlavgykndrsfvvrgdkiGvfkhtddnelefstaiskvetlkgkllsPkkvmlheedrklilqdekdknklykmDlerGkvvdewkvhddipvv 99 
                 ekns lavgykndrs+v r+++iGvfkh d+n l+f t+i+++++++gk l+P+k++l ++d+++++q ++++++ly+mD+e+Gkvv+ewk+hdd+p+v
  EPX71571.1 459 EKNSILAVGYKNDRSYVARNNRIGVFKHVDNN-LKFDTSIDNLKKPNGKPLQPSKILLQNQDSSIVFQTKDSPHHLYNMDVEYGKVVEEWKIHDDVPLV 556
                 58**************************9887.****************************************************************** PP

       VID27 100 efapekkfaqlteeqtllGlsknalfriDPrlsgnklvdselkqyaskndfsavattekGyiavasekGdirlfdrlginaktalPalgdpiigldvsa 198
                  +ap++kfaq+t+e+tl+Gls+n++friDPr++gnklv +e+kqya++n+f ++attekGyiavas+kGdirlfdrlginaktalPalg+piig+dv+a
  EPX71571.1 557 AVAPDNKFAQMTAEKTLVGLSNNSIFRIDPRVNGNKLVAEEFKQYATRNHFHTAATTEKGYIAVASDKGDIRLFDRLGINAKTALPALGEPIIGIDVTA 655
                 *************************************************************************************************** PP

       VID27 199 dGrwvlatcktyllLiDalikegkneGklgfeksfakdskpkprrLklkpehvaqlqeetkkpvsftkakfntgldseettivtstGpfvitwslkkvl 297
                 dG+wvlatcktyllLiDa+ik+g+++Gklgfe+sf+kdskpkp+rL+l+p+hva++q e k +vsft+akfntg+d++etti++s+Gp++i+w+++ v+
  EPX71571.1 656 DGNWVLATCKTYLLLIDARIKDGRYAGKLGFERSFGKDSKPKPKRLQLSPQHVAMMQGELKDGVSFTTAKFNTGIDAKETTIISSVGPYLISWNMDLVK 754
                 *************************************************************************************************** PP

       VID27 298 kgkkdpYkikryeeevvadnfkfgsdknvivalkndvsmvkkkslkkptreslatea 354
                 +gk+d+Yk++ry+++++a++f+fg+dkn+ival++dv+m++k+sl++ptr+s++t+a
  EPX71571.1 755 RGKTDKYKLRRYQANIQAEDFRFGTDKNMIVALPDDVTMIDKSSLRRPTRASICTPA 811
                 *****************************************************9986 PP

>> VID27_N  VID27 N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  189.3   1.5   8.2e-60   4.9e-56       1     173 []       1     162 [.       1     162 [. 0.95
   2 ?    3.2   1.1     0.011        69     115     168 ..     338     389 ..     241     393 .. 0.72
   3 ?   -8.4  10.1         3   1.8e+04      68     100 ..     398     435 ..     391     466 .. 0.46

  Alignments for each domain:
  == domain 1  score: 189.3 bits;  conditional E-value: 8.2e-60
     VID27_N   1 MfllkslgkllfgssskeelieipsGqLylvrpqspkgsselifkdAaasirrttqefqyqLvvqrvyeegeeelleeeeeeddeakkekdekvfllde 99 
                 Mf+lkslgk+++g+s+++e+++ip GqLy v+    ++ +e++fkdA+asirrtt+efqyqLv+qr+yeegee l+ +  +e       +de+ fllde
  EPX71571.1   1 MFMLKSLGKYIWGNSTSSEIMQIPYGQLYSVH----NDFRECMFKDASASIRRTTAEFQYQLVIQRAYEEGEEILEGDGSDEV------EDEQAFLLDE 89 
                 9******************************9....789*********************************77777766666......5********* PP

     VID27_N 100 eLkfrveekedgekvlaWrdlsgdegdlyeFvvdesvkeeevkqfelvayqcqyErkyrksaekateedLeefe 173
                 +L++r+e k+ +  +++W++++ ++g+lyeF+++  ++e  + +fe+va+qc+yErkyr++++kat +dLe+f+
  EPX71571.1  90 RLNLRFEVKK-DGITMMWDNPEFQDGTLYEFTCEDGLQEGVAYTFEMVALQCMYERKYRQPHSKATLADLEQFS 162
                 *********5.66899********************************************************95 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.011
     VID27_N 115 laWrdlsgdegdlyeFvvdesvkeeevkqfelvayqcqyErkyrksaekateed 168
                 ++W+   ++ g+++ + ++   ++ee+++f+++++++ +E  +++   k+++++
  EPX71571.1 338 FIWN-YYDEIGTAFSWLLRF-PNQEEMDKFQEILMRALWENLNQQKWLKIKDDE 389
                 7884.567888888888885.58999***************9999888777765 PP

  == domain 3  score: -8.4 bits;  conditional E-value: 3
     VID27_N  68 yeegeeelleeeeeedde..a...kkekdekvflldee 100
                 ye++e   +++ee+ed+   +   + +++e+  ++ ++
  EPX71571.1 398 YEDDEMPDADSEEDEDAVlrQlrqEDSEEENESQVRDS 435
                 66666555555555554443144333333433333333 PP

>> VID27_PH  VID27 PH-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.32   1.9e+03      31      46 ..      47      63 ..      28      82 .. 0.70
   2 !  131.2   5.1   2.9e-42   1.7e-38       4     109 .]     272     376 ..     269     376 .. 0.96

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.32
    VID27_PH 31 viel.gkweYwLqiege 46
                +  +  +++Y+L+i+ +
  EPX71571.1 47 IRRTtAEFQYQLVIQRA 63
                3333378******9843 PP

  == domain 2  score: 131.2 bits;  conditional E-value: 2.9e-42
    VID27_PH   4 aeeeaeLhlfDaesgeFilqeeevkaavielgkweYwLqiegeeekewlgqevsadmnpvfnfeylsfifnyvsedgealSwlLrFkdeeeleefqeal 102
                   ++aeL+lfD+ ++ F+lq ++v+a+v++lg+w+Yw++++++e ++w++q+v ++mnpvf+fe+lsfi+ny++e g+a+SwlLrF ++ee+++fqe+l
  EPX71571.1 272 GFVHAELYLFDSLEEIFVLQTKDVEACVYDLGNWDYWFTLTSKE-RKWMNQSVGSSMNPVFSFEHLSFIWNYYDEIGTAFSWLLRFPNQEEMDKFQEIL 369
                 5679*************************************999.88**************************************************** PP

    VID27_PH 103 mralwes 109
                 mralwe+
  EPX71571.1 370 MRALWEN 376
                 *****95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (826 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1156  (0.0644765); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.75u 0.31s 00:00:01.06 Elapsed: 00:00:00.50
# Mc/sec: 4980.33
//
Query:       EPX71572.1  [L=778]
Description: kinesin-like protein Klp6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   4.5e-112  374.3   0.0   6.6e-112  373.7   0.0    1.3  1  Kinesin      Kinesin motor domain
    6.1e-25   87.9   0.0    1.4e-24   86.7   0.0    1.7  1  Microtub_bd  Microtubule binding
  ------ inclusion threshold ------
      0.014   14.7   1.3      0.024   14.0   1.3    1.3  1  FAM76        FAM76 protein
       0.25   11.8   4.5       0.18   12.3   1.3    2.2  2  AAA_23       AAA domain


Domain annotation for each model (and alignments):
>> Kinesin  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  373.7   0.0  1.5e-115  6.6e-112       1     333 []      12     384 ..      12     384 .. 0.87

  Alignments for each domain:
  == domain 1  score: 373.7 bits;  conditional E-value: 1.5e-115
                 EE-SSSHHHHTTTTEBCEEEEC............................................TCTCEEEEEEEEECTTSCEEEEESEEEETTS-H CS
     Kinesin   1 RvRplnekekeeeeeeevevee............................................ekkeeekkskkenkeeeekkfkFdkvfdeeatq 55 
                 RvRp++e+e+e   e+ ++ e                                               +  +k+  +  k+ ++ +f+Fd++f+++atq
  EPX71572.1  12 RVRPFTEQEQELLVETPNSAEYlgdgslagaksssyfseqtkkrgirrilrvldnnvlvfdppeenPLAGVQKSILSAGKRFRDLRFAFDRLFHDNATQ 110
                 5666666666665555555444556666666666666666666666666666666666666665544444555556667788999************** PP

                 HHHHHHHHHHHHHHHHTTSEEEEEEEESTTSSHHHHHTBCTTTSBSHHHHHHHHHHHHHHHCTTTHEEEEEEEEEEEEEETTEEEETTSTTT..TSTSS CS
     Kinesin  56 eevyeetakplvesvleGynatifaYGqtgsGKTyTmegkeeeeeGiipraleelFesikkekeekekefsvkvsylEiYneeiyDLLeskk..skkkk 152
                 eevye t+k+l++svleGynat+faYG+tg+GKT+T++g+  +++Gii+ +++el ++i++ k++  ++++++vsylEiYne+i+DLL++++    + k
  EPX71572.1 111 EEVYEGTTKSLLDSVLEGYNATVFAYGATGCGKTHTISGE-PNDPGIIFLTMRELLTRIENVKAT--MDVELSVSYLEIYNEKIRDLLSQDPtsLVTPK 206
                 ***************************************8.999***************999987..99*********************995534556 PP

                 EBEEEECTTSCCEEETTS--EEESSHHHHHHHHHHHHHHHTSTTSSCTSHHCCSEEEEEEEEEEEETTTTTCEEEEEEEEEEEEEEECCCHHHHSSTCH CS
     Kinesin 153 klkiredskkgevyvkgltevevksaeevlellekgeknrkvaetklneeSSRSHavftitleqknlkeeteekvkisklnLvDLAGsErasktgaaeg 251
                 +l+ired++++ + v glt  + k++eev++++ +g++nr+++ t++n+ SSRSHav++i ++qk +++ +  k  +s ++++DLAGsEras+t++ +g
  EPX71572.1 207 SLTIREDADQN-ISVPGLTCFSPKDLEEVMDIIVRGNNNRTMSPTEANAVSSRSHAVLQIYIHQKPRSNPDG-KELQSVFSFIDLAGSERASATKN-RG 302
                 8********75.******************************************************998777.5699******************6.79 PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHTCCTSTSCGGGSHHHHHTGGGHSSSSEEEEEEEE-TBGGGHHHHHHHHHHHHHHCTT CS
     Kinesin 252 erlkEaaniNkSLlaLgrvisaLaekkkskhipYRdSkLTrlLqdsLgGnsktlmivtvspssenleetlstlkfaerakei 333
                 +rl E+aniN+SLlaLg++i++L+++++++h+pYRdS+LTrlL+ sLgGn+kt+miv+vspss++++et++tlk+++rak+i
  EPX71572.1 303 DRLIEGANINRSLLALGNCINSLCDQRRRQHVPYRDSNLTRLLKFSLGGNCKTVMIVCVSPSSQHYDETHNTLKYGNRAKNI 384
                 99******************************************************************************98 PP

>> Microtub_bd  Microtubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.7   0.0   3.2e-28   1.4e-24      44     149 .]      90     195 ..       6     195 .. 0.87

  Alignments for each domain:
  == domain 1  score: 86.7 bits;  conditional E-value: 3.2e-28
                  ...TTTEEEE-SEEEECTTHCCCCCCCC.HHHHHHHHTT--EEEEEEES................ST-HCHHHHHHHHHHCCTSCCCCEEEEEEEEEE CS
  Microtub_bd  44 eekkkkkefsFdrvfeseseqeevfeei.sqlvqsaldgynvcifaygqTGsGKtyTmegeeeeagmipraveeifetiselkekgwkyeielqfvei 140
                   ++ ++ +f Fdr+f+ +++qeev+e + + l++s+l+gyn ++fayg TG GKt+T++ge +++g i  +++e+++ i++  + ++++e++++++ei
   EPX71572.1  90 GKRFRDLRFAFDRLFHDNATQEEVYEGTtKSLLDSVLEGYNATVFAYGATGCGKTHTISGEPNDPGIIFLTMRELLTRIENV-KATMDVELSVSYLEI 186
                  56778889*****************975278**************************************************9.689************ PP

                  ESS-EEETT CS
  Microtub_bd 141 ynekvqDlL 149
                  ynek++DlL
   EPX71572.1 187 YNEKIRDLL 195
                  ********8 PP

>> FAM76  FAM76 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   1.3   5.4e-06     0.024     187     276 ..     376     463 ..     329     484 .. 0.69

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 5.4e-06
       FAM76 187 evskleeeklaeekesnetskk.sldsnssdhlvavtqLkeeiaslkkqleqk.dqellekd.kkitelkaellekekelreklkelekeake 276
                 +  +     +a++ +++ t+++ s+d ++s+ + ++ +L++++  l+k++++  +q+l++k+ +ki++  + +le ++ l+  +  ++   ke
  EPX71572.1 376 KYGN-----RAKNIKTKVTRNTiSVDRHVSEYVRVIYELRQRVSFLQKRISEEsNQSLSSKEaRKISSREVRMLEARNILKASFDGSRDLQKE 463
                 2222.....222222222322359*************************98652778988875899999999999888877766544433333 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1       0.4   1.8e+03      25      33 ..     136     144 ..     133     147 .. 0.92
   2 ?   12.3   1.3   4.1e-05      0.18      88     197 ..     382     511 ..     316     514 .. 0.72

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.4
      AAA_23  25 tGpNGaGKT 33 
                 +G +G+GKT
  EPX71572.1 136 YGATGCGKT 144
                 7*******9 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 4.1e-05
      AAA_23  88 rsiererelskkkgkttkkaklellei.deleqfisellgskkiilnlilflgqer..........feefelkdkkerleelekeleeledekkllekl 175
                 ++i+ + +++  + ++      e +++  el+q++s l ++  +++n++l  ++ r          ++++ lk+ ++  ++l+kel ++  + ++le++
  EPX71572.1 382 KNIKTKVTRNTISVDRH---VSEYVRViYELRQRVSFLQKRISEESNQSLSSKEARkissrevrmlEARNILKASFDGSRDLQKELVHNVRTLRKLEDE 477
                 23333333333322222...222222247788888888888888889999888888888888888877777899**********************999 PP

      AAA_23 176 ........eqekekek....eleeleeeleeilk 197
                          q+++ e+    ele ++++le++  
  EPX71572.1 478 ihlsqvwiAQAENHEAipkkELELVKSRLEQLYA 511
                 9999999744444444666799999999999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (778 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       901  (0.0502538); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.67u 0.32s 00:00:00.99 Elapsed: 00:00:00.47
# Mc/sec: 4935.59
//
Query:       EPX71573.1  [L=143]
Description: 40S ribosomal protein S19 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.9e-59  198.7   0.0    3.3e-59  198.5   0.0    1.0  1  Ribosomal_S19e  Ribosomal protein S19e


Domain annotation for each model (and alignments):
>> Ribosomal_S19e  Ribosomal protein S19e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  198.5   0.0   1.8e-63   3.3e-59       1     136 [.       5     140 ..       5     141 .. 0.98

  Alignments for each domain:
  == domain 1  score: 198.5 bits;  conditional E-value: 1.8e-63
                     TSSSHHHHHHHHHS--S---S-SSS-SSSS-SS-S-SS-SSTTTHHHHHHHHHHHTS--TTSGGGGS----SS-SSS-------THHHHHHHHHT CS
  Ribosomal_S19e   1 tvkdVpaeelikalaeeLkksgklevPewadlvKtgsakelapededWfyvRaAsilRkvylrgpvGverlrkvYGgkkrrgvrpshfvkasgsv 95 
                     +vkdV+a+++i+a++++Lk+sgk+  P+w+d+vKtg++kelap+d+dW++vRaA+i+R++ylr++vGv+rl kvYGg+ +rg+rpsh++++sgsv
      EPX71573.1   5 SVKDVDAQRFITAYSAFLKRSGKMATPQWIDIVKTGTHKELAPYDPDWYFVRAAAIARHIYLRKDVGVGRLCKVYGGSVNRGMRPSHHRDGSGSV 99 
                     59********************************************************************************************* PP

                     TSSS--SSS---SS-HHHHHTHHHHH--SS--S--XXXXXX CS
  Ribosomal_S19e  96 irkilqqLeklglvkkekkkgrrltkkGqrlldriaeevak 136
                     +rk++q+Lek+g+++k++++grr++++Gqr+ldria+++++
      EPX71573.1 100 QRKVIQSLEKIGVLEKSDNGGRRISQQGQRDLDRIAYSLLE 140
                     **************999999****************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       293  (0.0163422); expected 358.6 (0.02)
Passed bias filter:                      275  (0.0153383); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.28s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 1019.42
//
Query:       EPX71574.1  [L=519]
Description: response regulator Mcs4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.1e-22   78.2   0.0    1.9e-15   57.0   0.0    2.4  2  Response_reg  Response regulator receiver domain


Domain annotation for each model (and alignments):
>> Response_reg  Response regulator receiver domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.0   0.0     1e-19   1.9e-15       1      75 [.     361     433 ..     361     445 .. 0.91
   2 !   18.8   0.0   7.9e-08    0.0014      70     111 ..     457     498 ..     450     499 .. 0.86

  Alignments for each domain:
  == domain 1  score: 57.0 bits;  conditional E-value: 1e-19
                   EEEESSSHHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHESEEEEESSCSSSEHHHHHHHHHHCTTTSEEE CS
  Response_reg   1 vlivdDdplvrellrqlleeegyeevaeaedgkealellkeekvdlillDinmpgmdGlellkeireedpelpvi 75 
                   vliv+D+ +++++l+ +++++++ + ++a+dg eale++k+++++lil+Di++p+++G++++keir+ +  l+ i
    EPX71574.1 361 VLIVEDNIINQKILEAFMKKRNI-SSEVAKDGPEALEKWKKKSFHLILMDIQLPTLSGIDVTKEIRRLE-RLNAI 433
                   8**********************.******************************************998.44444 PP

  == domain 2  score: 18.8 bits;  conditional E-value: 7.9e-08
                   TTSEEEEEESSTSHHHHHHHHHCTESEEEESSG-HHHHHHHH CS
  Response_reg  70 pelpviiltahseeedavealkagaddflsKpfdpeeLlkal 111
                   + + +++lta s ++d++eal ag +dfl+Kp++   L k++
    EPX71574.1 457 SPVIIVALTASSLMADRNEALAAGCNDFLTKPVSLVWLEKKI 498
                   4567888999999*******************9988887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (519 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       794  (0.0442858); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 3602.25
//
Query:       EPX71575.1  [L=448]
Description: tRNA pseudouridine synthase Pus2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.6e-12   46.1   0.0      4e-08   33.7   0.0    2.5  2  PseudoU_synth_1  tRNA pseudouridine synthase


Domain annotation for each model (and alignments):
>> PseudoU_synth_1  tRNA pseudouridine synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.0   4.9e-05      0.89      44      91 ..      75     131 ..      14     142 .. 0.75
   2 !   33.7   0.0   2.2e-12     4e-08       2     107 ..     277     382 ..     276     383 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 4.9e-05
  PseudoU_synth_1  44 l.......vvtvkgsgFldhqVRamvgvl.fav.gqgklspedvkellnakkrkkia 91 
                              ++ +  s+++d++V+ +++++ + v  q + +p+ ++e ln k++++i 
       EPX71575.1  75 KkekidenKLVIARSARTDKGVHTLGNLVsINVfIQDSVNPSVLREQLNEKLNRQIR 131
                      04444444899999*************998777678999**********99977754 PP

  == domain 2  score: 33.7 bits;  conditional E-value: 2.2e-12
  PseudoU_synth_1   2 akelvGthdfgsfckqkqek.kntvrtileaaieevsge.ekellvvtvkgsgFldhqVRamvgvlfavgqgklspedvkellnakkrkkiave 93 
                       + ++G+h+f +f+  + +k ++  r i +++  +   + + e++ vt++g++F+ +q+R m++ ++ v +     + +++ l       +++ 
       EPX71575.1 277 LQLYLGRHNFHNFTVTQDPKaSSNYRIIESIECGKPFVYeQWEWIPVTIRGNSFMLNQIRKMMAHALMVIRSCARSNVLTKSLSPDVS--MNIS 368
                      589**********76666665999999999999985554045788***********************99988888888888877664..4677 PP

  PseudoU_synth_1  94 tapavglvlfhvrY 107
                      + p + l l +++Y
       EPX71575.1 369 KSPGHVLLLKDINY 382
                      77777777777777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (448 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       814  (0.0454013); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.30s 00:00:00.86 Elapsed: 00:00:00.49
# Mc/sec: 2762.84
//
Query:       EPX71576.1  [L=1254]
Description: P-type ATPase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.3e-83  278.1  24.6    7.3e-83  278.1  24.6    2.3  2  PhoLip_ATPase_C  Phospholipid-translocating P-type ATPase C-t
    4.9e-22   77.4   7.4    1.7e-21   75.7   7.1    2.1  2  PhoLip_ATPase_N  Phospholipid-translocating ATPase N-terminal
    1.4e-11   44.3   0.0    6.6e-11   42.1   0.0    2.1  2  Cation_ATPase    Cation transport ATPase (P-type)
    7.6e-11   42.7   0.1    4.7e-05   23.8   0.1    3.2  2  Hydrolase        haloacid dehalogenase-like hydrolase
    5.1e-05   22.9   0.0    0.00016   21.3   0.0    1.8  1  E1-E2_ATPase     E1-E2 ATPase
     0.0033   17.2   0.6     0.0092   15.7   0.2    1.9  2  Hydrolase_3      haloacid dehalogenase-like hydrolase
  ------ inclusion threshold ------
      0.074   13.1   0.1       0.21   11.7   0.0    1.8  2  YopX             YopX protein


Domain annotation for each model (and alignments):
>> PhoLip_ATPase_C  Phospholipid-translocating P-type ATPase C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   3.0      0.33   8.5e+02     175     244 ..     407     478 ..     373     483 .. 0.53
   2 !  278.1  24.6   2.8e-86   7.3e-83       1     249 []     931    1183 ..     931    1183 .. 0.97

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.33
  PhoLip_ATPase_C 175 twtliliililgsillyflflllyssllps....ssefygvleelfss.psfwlv.lllvvvvallpdllikvlkr 244
                      +  li+++l+++s l  ++   +y s +++    +        e+f++ ++fw++   lv++  ++   l++++++
       EPX71576.1 407 YLVLIFVFLCFCSSLGSLIQRSVYGSAFSYlhitA----SRGGEFFKQlLTFWILySNLVPISLFVTFELVRYVQA 478
                      12222222222222222222235555444433222....2345677776888888434444444444446666665 PP

  == domain 2  score: 278.1 bits;  conditional E-value: 2.8e-86
  PhoLip_ATPase_C    1 vraSDyaiaqFrfLkrLLlvhGrwsyrRisklilyffyKnvvftlvqfwfqfyngfsgqslyeswlltlynllftslpvivlgifdqdvsae 92  
                       vr+SD++i+qF++L++LLlvhG w+y+R+ klil++fyKnv+++++qfwf+f n+fsgq  yesw+++lyn+lft+lp+i++gifdq vsa+
       EPX71576.1  931 VRSSDFSISQFCYLRKLLLVHGSWCYQRLGKLILFSFYKNVALYMTQFWFAFCNAFSGQVTYESWSISLYNVLFTVLPPIIIGIFDQYVSAS 1022
                       79****************************************************************************************** PP

  PhoLip_ATPase_C   93 lllkyPelYklgqknklfnlktfllwileglyqsliifflsylvlddssfs.dgktndlqlfgtlvftalvlvvnlkvaletktwtliliil 183 
                        l +yP+lY+lgq++++fnlk+f+ wi++g+y+sl++f++s++v+ +   + +g t++++ +gt+ + +++ +v+ k al t++wt++++i+
       EPX71576.1 1023 QLYQYPQLYQLGQRDEFFNLKRFWAWIANGFYHSLLLFLCSLAVFAYDGPNsNGPTSGHWVWGTTLYAMILATVLGKAALVTNHWTYYMLIA 1114
                       ****************************************999966655556**************************************** PP

  PhoLip_ATPase_C  184 ilgsillyflflllyssllps...ssefygvleelfsspsfwlvlllvvvvallpdllikvlkrtffps 249 
                       +lgs++++++f+ +y  + p    s+ef g++ +l ++++fw+++l+ +++al++d+++k+  r+++p+
       EPX71576.1 1115 TLGSFVFWLVFMPIYAVVAPAigfSKEFKGIIPYLHGNLKFWASILVFPTFALMRDFVWKYSSRMYYPE 1183
                       ***************9999999999999999***********************************995 PP

>> PhoLip_ATPase_N  Phospholipid-translocating ATPase N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.7   7.1   6.6e-25   1.7e-21       3      67 .]     147     208 ..     145     208 .. 0.92
   2 ?   -2.8   0.0       2.1   5.5e+03      44      62 ..     578     597 ..     563     600 .. 0.73

  Alignments for each domain:
  == domain 1  score: 75.7 bits;  conditional E-value: 6.6e-25
  PhoLip_ATPase_N   3 indreenekkkyasNkIsTsKYtlltFlpknLfeqFrrvaNlYFLviailqliPqisplspvtti 67 
                      ind ++n   ++++N +sT KY++++Flpk+L eqF++++Nl+FL++ai+q+iP+i+p++++tti
       EPX71576.1 147 INDYTAN---HFSNNVVSTCKYNVASFLPKFLQEQFSKYSNLFFLFTAIIQQIPGITPMNRYTTI 208
                      6664444...6****************************************************97 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 2.1
  PhoLip_ATPase_N  44 lYFLviailql.iPqispls 62 
                       + Lv++i q+ iP+   +s
       EPX71576.1 578 HFLLVLSICQTvIPEYDETS 597
                      57888888886588877665 PP

>> Cation_ATPase  Cation transport ATPase (P-type)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.1   0.0   2.6e-14   6.6e-11      17      87 ..     601     682 ..     582     685 .. 0.88
   2 ?   -2.8   0.0       2.7     7e+03      15      29 ..     781     795 ..     773     816 .. 0.82

  Alignments for each domain:
  == domain 1  score: 42.1 bits;  conditional E-value: 2.6e-14
  Cation_ATPase  17 vkllGnktEsALlvlaekl............gldteelreetkkvqeipFnssrKrmsvvlklepekkvrlyvKGApeiilkr 87 
                    +    +++E AL++ a+ +            + +  + +e ++ +++ +Fns+rKrms++++  p++k+rly+KGA  +il+r
     EPX71576.1 601 KYQASSPDEGALVKGAASIgyeflarkpryvTVKLFDKEETYELLNICEFNSTRKRMSIIFRS-PDGKIRLYIKGADTVILDR 682
                    4457899************9999999999999999999999*********************8.9****************98 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 2.7
  Cation_ATPase  15 devkllGnktEsALl 29 
                    + + l+G+  E+A+ 
     EPX71576.1 781 KIWVLTGDRQETAIN 795
                    67899********85 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.1   1.8e-08   4.7e-05       4     150 ..     513     795 ..     510     827 .. 0.64
   2 !   13.1   0.0   3.3e-05     0.085     173     210 .]     879     917 ..     856     917 .. 0.84

  Alignments for each domain:
  == domain 1  score: 23.8 bits;  conditional E-value: 1.8e-08
                 EEEESBTTTBCHHHHHHHHHHHHCHHHHHHHHHH.......HHCHHHHHHHHHHHHHHHHH.HHHHHETTTE.....................HHHHTH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxx.xxxxxxxxxx.....................xxxxxx RF
   Hydrolase   4 vvfDkdGTLttgepsvedvivsaalalaaaletg.......sehpigkalvaaakarsgal.tgfatfigrg.....................ayaigk 73 
                 ++ Dk+GTLt+ ++  +++          a + +       se      +v  +  ++ +l ++++ +i +                      +y+  +
  EPX71576.1 513 IFSDKTGTLTRNQMDFRQCSIAG-----LAYADVvpeerqySEDLDSDMIVYDFSTLKKNLdSSNGDLIHHFllvlsicqtvipeydetsnsiKYQASS 606
                 67788888888888888865555.....11111122222222222222223333333333322222233333555554433333333333333222222 PP

                 HHHHHHHHCHHHHHHHHHHHHHHCHHHHHH..................................................................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..................................................................... RF
   Hydrolase  74 pewltaldippdlgaaigsaqsqgrtvall..................................................................... 103
                 p+           ga +            +                                                                     
  EPX71576.1 607 PD----------EGALV------------Kgaasigyeflarkpryvtvklfdkeetyellnicefnstrkrmsiifrspdgkirlyikgadtvildrl 683
                 22..........22222............1222222222222444444555555556666677777777777777888888888888888888888888 PP

                 ...................................................................TTHHHHHHHHHHTHHBHTTHHHHHHHHHHTTE CS
                 ...................................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 104 ...................................................................qaralavftiadplkvkpeaaeavasLkaagi 135
                                                                                    +  +l+  +i+d   + +++ +++ +L+ agi
  EPX71576.1 684 agecpylkttihhledyatvglrtlciamreisdsdyqrwsviyeaastslvdraqklmdaaemiekDLTLLGATAIEDR--LQDGVPDTISTLQTAGI 780
                 888888888888888888888888888888888888888888888888888889999999999999999***********..***************** PP

                 EEEEEESSEHHHHHH CS
                 xxxxxxxxxxxxxxx RF
   Hydrolase 136 evvlltgdnpetaer 150
                 ++++ltgd +eta  
  EPX71576.1 781 KIWVLTGDRQETAIN 795
                 ***********9964 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 3.3e-05
                 TTSHHHHHHHHHHHT.STGGGEEEEESSHHHHHHHHHTT CS
                 xxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 173 kpspegkvaaireLq.gkpeevamVGDgvnDaaalaaAg 210
                  +sp +k  +++  +    +  +++GDg+nD+++++aA+
  EPX71576.1 879 RVSPLQKALVVKMVKrNTDSILLAIGDGANDVPMIQAAN 917
                 6899999999999985446669***************96 PP

>> E1-E2_ATPase  E1-E2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.0   6.2e-08   0.00016       4     133 ..     238     419 ..     235     441 .. 0.83

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 6.2e-08
                   --EEEEE-TTS-EEEEGGG--TTSEEEEETT-B--SEEEEEEE-S.....EEE-TTTS---S-EE-............................... CS
  E1-E2_ATPase   4 pptakvirdgteeeidakelvpGDivllkagdrvpaDgrivegsa.....evdesaLTGEslpvek............................... 64 
                    + ++v++++   e + ke+++GDiv++ ++   paD +++++s+      ++++ L GE     k                               
    EPX71576.1 238 TSVCHVMQGTGFIEKQWKEVQVGDIVKVVSETFFPADLILLSSSEpeglcYIETANLDGETNLKVKqalpetssllkpielsqlegtvkseqpnnsl 334
                   577899999999******************************777767779**********999999999999999999999999999999999999 PP

                   ..................G-TTEE-TT-EEEE-E.EEEEEEE-TTTSTTTTTSTTS--------HHHHHHHHHHHHHHHHHHHHHHHH CS
  E1-E2_ATPase  65 ..................ekgdmvfsGtvvvsge.akavVtatgedtelgkiarlveeakskktplqkkldklgkvlvpvvlliallv 133
                                       ++ +  G++  + + + ++Vt tg +t+l k    + ++  k+t ++k+++  + +lv++ +++++  
    EPX71576.1 335 ytydatikllpdnrelplGPEQLLLRGAQLRNTPwVYGIVTFTGHETKLMK---NTTKTPIKRTAVEKQVNTQILYLVLIFVFLCFCS 419
                   999999999999998888899999999999997724568888888887654...3444447788888888888888888888777655 PP

>> Hydrolase_3  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       1.2   3.1e+03      16      48 ..     764     796 ..     753     823 .. 0.81
   2 !   15.7   0.2   3.6e-06    0.0092     206     227 ..     900     921 ..     885     925 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 1.2
                  --HHHHHHHHHHHHTTSEEEEE-SS-HHHHHHH CS
  Hydrolase_3  16 isektkeaikklkekgikvviATGRslravlpv 48 
                  +++   ++i  l+ +gik+ + TG   ++++++
   EPX71576.1 764 LQDGVPDTISTLQTAGIKIWVLTGDRQETAINI 796
                  56667789999********99999777766665 PP

  == domain 2  score: 15.7 bits;  conditional E-value: 3.6e-06
                  EEEEESSGGGHHHHHHSSEEEE CS
  Hydrolase_3 206 viafGDgeNDieMLeaaglgvA 227
                   +a+GDg ND++M++aa++gv 
   EPX71576.1 900 LLAIGDGANDVPMIQAANIGVG 921
                  58******************95 PP

>> YopX  YopX protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   8.1e-05      0.21      28      76 ..     220     268 ..     209     291 .. 0.84
   2 ?   -3.7   0.1       4.4   1.1e+04       4      32 ..    1172    1200 ..    1172    1205 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 8.1e-05
                 CCCCCCCCCCECCCEEEEEEEEEEEEEEEEE-TTS-EEETTEEEEETTT CS
        YopX  28 keeleekkkeleeesaetideavlmqytGlkDkngkeIyegDivkvslk 76 
                  +e  e++k++++ ++++  +  +mq tG+  k+ ke+  gDivkv ++
  EPX71576.1 220 VKEVMEDIKRKQQDEETNTSVCHVMQGTGFIEKQWKEVQVGDIVKVVSE 268
                 55666777777777778888899**********************9765 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 4.4
                  EEETTTTEEECCCCCEE-TTSSCECCCCC CS
        YopX    4 awdkeenkmledeelelkkksnkskeele 32  
                  +w+   ++++  e  ++++ ++++ ++++
  EPX71576.1 1172 VWKYSSRMYYPEEYHYVQEIQKYNVTDYR 1200
                  57777777777888888888888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1254 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       842  (0.046963); expected 358.6 (0.02)
Passed bias filter:                      525  (0.0292822); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.84u 0.29s 00:00:01.12 Elapsed: 00:00:00.45
# Mc/sec: 8282.49
//
Query:       EPX71577.1  [L=426]
Description: 3-oxoacyl-[acyl-carrier-protein]-synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.8e-55  188.2   0.2    2.2e-54  184.7   0.1    2.1  3  ketoacyl-synt    Beta-ketoacyl synthase, N-terminal domain
    5.8e-34  116.6   0.9    1.3e-33  115.5   0.9    1.6  1  Ketoacyl-synt_C  Beta-ketoacyl synthase, C-terminal domain
    3.8e-06   26.4   0.3    3.1e-05   23.5   0.1    2.2  2  Thiolase_N       Thiolase, N-terminal domain
      0.005   16.7   3.1        2.8    7.8   0.0    3.5  4  ACP_syn_III      3-Oxoacyl-[acyl-carrier-protein (ACP)] synth
  ------ inclusion threshold ------
      0.095   13.2   0.0       0.24   11.9   0.0    1.8  1  KAsynt_C_assoc   Ketoacyl-synthetase C-terminal extension


Domain annotation for each model (and alignments):
>> ketoacyl-synt  Beta-ketoacyl synthase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  184.7   0.1   6.2e-58   2.2e-54       1     253 []       1     254 [.       1     254 [. 0.86
   2 ?    0.9   0.0     0.075   2.7e+02      95     121 ..     325     355 ..     281     365 .. 0.67
   3 ?    0.8   0.0     0.086   3.1e+02      95     123 ..     325     357 ..     311     383 .. 0.81

  Alignments for each domain:
  == domain 1  score: 184.7 bits;  conditional E-value: 6.2e-58
                    X--EEEEEEEEEBTTBSSHHHHHHHHHTT---EEES-TTSSCGTTSBTSSTTEEE-BSS.EEE..S.TTEGGTTSTHHHHHHHCTS-HHHHHHHHH CS
  ketoacyl-synt   1 aepvaivGmgarfPggndveefwelLlegrdaiselpadrwdadklydpparaagkiktklggfld.vddfdpeffgispreaeamdpqqrlllea 95 
                    +++v+i+G+ga++P g + + +w+ Ll+g+++i++l+    d  +++ +p+++ag ++    g  + + + ++++ + + r   ++  +++++l a
     EPX71577.1   1 MRRVVITGLGAVTPLGCGIKRTWNGLLQGKSGIASLK----DNPRFESLPSQIAGLVPR---GTNEgEWNPQAYINSSKLR---ETAEFTQFALAA 86 
                    689**********************************....67788889*********9...4444455555555555555...9*********** PP

                    HHHHHHHHTS-HHTCTTGG.EEEEEEESSTHHHHHHHHHHHTT.....GGGSCTTHHHHHSTTHHHHHHHHHHT--SSEEEEESGGGHH.HHHHHH CS
  ketoacyl-synt  96 awealedagltpeeldgsr.vgvfiGvgagdyaalaaldedgs.....evkaspkavgavlanviagrisyalglrGpsvtvdtACsSs.lvavha 184
                    + eal da + + + ++++ +gv+ ++g+g+ ++  +++  ++     ++k+sp ++++vl n+ ag is+++g+r+ ++tv+tAC+++ +++++a
     EPX71577.1  87 SSEALSDARWIDISDEEKEaTGVCFATGMGNLEDAIQQN--NVfinsgIRKISPRIITKVLMNMPAGYISQQYGFRACNHTVTTACAAGcHAIGDA 180
                    **********8777655556**********553322222..22334459*****999999*****************************5555555 PP

                    HHHHHHTTS-SEEEEEEEE---SHHHHHHHHHTTBB-TT...SGGGTTBTTB...-SB-BB-EEEEEEEEECHHH CS
  ketoacyl-synt 185 avqslrsgeadvalaGGvellltpeavagfsaagllspd...grckafdpka...dGfvlGEGvGavvLkrleda 253
                    + + ++  +a v+laGG+e +++p  +agfs+a+ ls++   +++ka++p++   dGfv+GEG+Ga+vL++le+a
     EPX71577.1 181 Y-NLIKLDQANVILAGGSESCINPLVLAGFSKARSLSTKfndDPSKASRPFDserDGFVIGEGAGALVLEELEHA 254
                    5.********************************5555558999****************************987 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.075
                    HHHHHHHHHTS-HHTC..TTGG....EEEEEEE CS
  ketoacyl-synt  95 aawealedagltpeel..dgsr....vgvfiGv 121
                    a +  l+d g++p+++  +  +    +g ++G+
     EPX71577.1 325 AIATLLKDDGIDPHSVsvS--SskgsIGHLLGA 355
                    4455677777777777442..223456666665 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.086
                    HHHHHHHHHTS-HHTC..TTGG....EEEEEEESS CS
  ketoacyl-synt  95 aawealedagltpeel..dgsr....vgvfiGvga 123
                    a +  l+d g++p+++  +  +    +g ++G++ 
     EPX71577.1 325 AIATLLKDDGIDPHSVsvS--SskgsIGHLLGAAG 357
                    567789*********9652..33467999998875 PP

>> Ketoacyl-synt_C  Beta-ketoacyl synthase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.5   0.9   3.5e-37   1.3e-33       1     117 [.     262     379 ..     262     380 .. 0.98

  Alignments for each domain:
  == domain 1  score: 115.5 bits;  conditional E-value: 3.5e-37
                      SEEEEEEEEEE--STSSSTSTTHHHHHHHHHHHHHHHT--GGGEEEEE-SS-SSHHHHHHHHHHHHHHHGGGGG.SCTSEEE-THHHH-B-GGG CS
  Ketoacyl-synt_C   1 yavikgsavnsdgahnsltapngeaqaraiekalaeagvdpedvdyveahgtgtplgDpiElealkkvfgekar.kqplavgSvKsniGHleaA 93 
                      ya++ g++ + d++++++++png+++ +a++kal++a+v+  + dy++ah+t+t+lgD+ E +a+++++++++   +++ v+S K +iGHl++A
       EPX71577.1 262 YAEVLGFGQSADNYNITAPNPNGSSAYAAMKKALKNANVSSGKLDYINAHATSTKLGDASESKAIATLLKDDGIdPHSVSVSSSKGSIGHLLGA 355
                      8**********99**********************************************************9988889**************** PP

                      HHHHHHHHHHHHHHHTEE--BTT- CS
  Ketoacyl-synt_C  94 aGvaelikvvlalkhgvipptlnl 117
                      aG++e i ++la+++++ip+tln+
       EPX71577.1 356 AGAVESIFTILAIHEKTIPATLNF 379
                      ***********************8 PP

>> Thiolase_N  Thiolase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.1   8.7e-09   3.1e-05      71     114 ..     158     199 ..     115     216 .. 0.88
   2 ?    0.5   0.0     0.086   3.1e+02      29      52 ..     289     312 ..     286     345 .. 0.74

  Alignments for each domain:
  == domain 1  score: 23.5 bits;  conditional E-value: 8.7e-09
                 TS-TTSEEEEEEHGGGHHHHHHHHHHHHHHTTSHSEEEEEEEEE CS
  Thiolase_N  71 gipeevpavtvnkvcsSglkavalaaqsiaageadvvvagGvEs 114
                 g+   ++ +tv+ +c+ g +a+ +a + i+  +a+v++agG Es
  EPX71577.1 158 GF--RACNHTVTTACAAGCHAIGDAYNLIKLDQANVILAGGSES 199
                 44..7889***********************************8 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.086
                 HHHHHHHHHHTS-GGGCCEEEEEH CS
  Thiolase_N  29 ealkallekagvdpeevdevivGn 52 
                 +a+k++l++a+v++ ++d++    
  EPX71577.1 289 AAMKKALKNANVSSGKLDYINAHA 312
                 689999999999999999886544 PP

>> ACP_syn_III  3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       0.4   1.4e+03      29      55 ..      83     114 ..      76     118 .. 0.73
   2 !    6.6   0.3    0.0019       6.8       3      36 ..     166     199 ..     165     206 .. 0.90
   3 !    7.8   0.0   0.00079       2.8      47      67 ..     234     254 ..     223     267 .. 0.72
   4 ?   -2.5   0.0       1.3   4.6e+03      38      56 ..     302     321 ..     296     344 .. 0.63

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.4
                  EEEEEEEEGGG..CS-TTT...HHHHTTB-EE CS
  ACP_syn_III  29 vLvigaetlsk..ilDwkd...rstavlfGDG 55 
                  +L  ++e+ls+  ++D +d   ++t v f+ G
   EPX71577.1  83 ALAASSEALSDarWIDISDeekEATGVCFATG 114
                  67888899987668999875557777777655 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0019
                  EE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEE CS
  ACP_syn_III   3 lnaaCsgfvyalsvAdaliesgaakrvLvigaet 36 
                  +++aC++ ++a+  A +li+ ++a+ +L  g+e 
   EPX71577.1 166 VTTACAAGCHAIGDAYNLIKLDQANVILAGGSES 199
                  689********************99999888775 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.00079
                  HHHTTB-EEEEEEEEEEESSS CS
  ACP_syn_III  47 stavlfGDGAgAvvleaseee 67 
                  +  ++ G GAgA+vle+ e+ 
   EPX71577.1 234 RDGFVIGEGAGALVLEELEHA 254
                  556799**********98543 PP

  == domain 4  score: -2.5 bits;  conditional E-value: 1.3
                  GGCS-TTT.HHHHTTB-EEE CS
  ACP_syn_III  38 skilDwkd.rstavlfGDGA 56 
                  s  lD+ +  +t++ +GD+ 
   EPX71577.1 302 SGKLDYINaHATSTKLGDAS 321
                  55667754477888888873 PP

>> KAsynt_C_assoc  Ketoacyl-synthetase C-terminal extension
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   6.7e-05      0.24      17      43 ..     394     421 ..     381     426 .] 0.70

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 6.7e-05
  KAsynt_C_assoc  17 teptpwpggi.vgvNsfGfGGsnvHviL 43 
                      ++t+++    +  NsfGfGG+n+ + +
      EPX71577.1 394 PNKTKLKTVNyALTNSFGFGGTNASLCI 421
                     45555555443778*********98766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (426 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       571  (0.0318478); expected 358.6 (0.02)
Passed bias filter:                      506  (0.0282224); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.45
# Mc/sec: 2865.26
//
Query:       EPX71578.1  [L=788]
Description: pif1 helicase Pfh1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.7e-63  214.3   2.1    3.3e-60  204.2   1.1    2.5  2  PIF1             PIF1-like helicase
    2.2e-23   83.0   0.0    4.2e-23   82.1   0.0    1.5  1  AAA_30           AAA domain
    1.3e-11   45.1   0.1    2.4e-11   44.1   0.1    1.5  1  AAA_19           AAA domain
    1.9e-05   25.0   0.1    6.3e-05   23.3   0.1    1.9  1  AAA_22           AAA domain
    1.9e-05   22.8   0.1    0.00018   19.6   0.0    2.1  2  Herpes_Helicase  Helicase
      6e-05   22.6   0.4    0.00014   21.4   0.0    1.7  2  AAA_7            P-loop containing dynein motor region
    0.00012   21.9   0.1    0.00027   20.7   0.1    1.6  1  UvrD_C_2         UvrD-like helicase C-terminal domain
    0.00036   20.0   0.0    0.00091   18.7   0.0    1.6  1  Mg_chelatase     Magnesium chelatase, subunit ChlI
     0.0012   19.3   0.0      0.003   17.9   0.0    1.7  1  AAA_16           AAA ATPase domain
     0.0013   17.9   0.1     0.0032   16.6   0.0    1.6  2  T2SSE            Type II/IV secretion system protein
     0.0014   17.9   0.1      0.023   14.0   0.1    2.3  2  DUF2075          Uncharacterized conserved protein (DUF2075)
     0.0028   17.6   0.0      0.006   16.5   0.0    1.6  1  NACHT            NACHT domain
     0.0033   17.3   5.6     0.0067   16.2   0.0    3.2  4  AAA_11           AAA domain
     0.0033   16.9   0.2     0.0093   15.4   0.1    1.7  1  PhoH             PhoH-like protein
     0.0035   17.8   0.1       0.01   16.2   0.1    1.8  1  AAA              ATPase family associated with various cellul
     0.0039   17.0   0.5        4.9    6.8   0.4    3.0  2  Viral_helicase1  Viral (Superfamily 1) RNA helicase
     0.0041   17.1   0.4      0.068   13.1   0.4    2.4  1  ATPase_2         ATPase domain predominantly from Archaea
     0.0088   15.3   0.3      0.015   14.5   0.3    1.3  1  NB-ARC           NB-ARC domain
  ------ inclusion threshold ------
      0.015   14.2   0.1      0.026   13.4   0.1    1.2  1  TrwB_AAD_bind    Type IV secretion-system coupling protein DN
       0.02   14.8   0.2      0.084   12.8   0.0    2.0  2  NTPase_1         NTPase
      0.021   14.2   0.1      0.065   12.6   0.1    1.8  1  TniB             Bacterial TniB protein
      0.026   14.2   0.1      0.056   13.1   0.1    1.5  1  Sigma54_activat  Sigma-54 interaction domain
      0.026   14.4   0.0      0.058   13.3   0.0    1.5  1  RsgA_GTPase      RsgA GTPase
      0.041   13.7   1.5       0.23   11.3   1.5    2.1  1  Helicase_RecD    Helicase
      0.042   14.3   0.1       0.15   12.4   0.1    2.1  1  RNA_helicase     RNA helicase
      0.044   12.8   0.0      0.077   12.0   0.0    1.3  1  MeaB             Methylmalonyl Co-A mutase-associated GTPase 
      0.065   13.2   1.2       0.41   10.6   0.5    2.5  2  AAA_5            AAA domain (dynein-related subfamily)
      0.092   12.6   0.1       0.29   11.0   0.1    1.9  1  SH3_13           ATP-dependent RecD-like DNA helicase SH3 dom
       0.12   12.3   0.0       0.24   11.4   0.0    1.4  1  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
       0.14   11.9   0.1         23    4.7   0.1    2.5  2  IstB_IS21        IstB-like ATP binding protein
       0.16   11.8   1.2       0.31   10.9   0.1    2.0  2  GAPT             GRB2-binding adapter (GAPT)
       0.43   10.1   3.3        1.3    8.5   0.1    2.8  3  UvrD-helicase    UvrD/REP helicase N-terminal domain


Domain annotation for each model (and alignments):
>> PIF1  PIF1-like helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  204.2   1.1   5.8e-63   3.3e-60       2     363 ..     297     603 ..     296     604 .. 0.91
   2 ?   -3.1   0.0       5.8   3.2e+03      65      88 ..     685     708 ..     683     718 .. 0.77

  Alignments for each domain:
  == domain 1  score: 204.2 bits;  conditional E-value: 5.8e-63
                 --HHHHHHHHHH......HCTS-EEEEESTTSSCHHHHHHHHHHCHC....TCCCEEEEESSHHHHHCC.TSEECHHHHT-TTSSS-HHHH..HHHTSC CS
        PIF1   2 LneeQkkvfdaiieavlnekgklfFvtGsgGtgKtflwkallkklrs....egkivlavAssGvAalllegGrtahsrfkiplekdeestc..kikrgs 94 
                 L++eQk+++d +      e+ +++F+tGs+GtgK+ l+++++++l+     + + v+++As+G+Aa+++ gG t+hs+++ +l  ++ + +  kik+++
  EPX71578.1 297 LSDEQKRILDMV-----VEQQHSIFFTGSAGTGKSVLLRKIIEALKMkyrkQTDRVAVTASTGLAACNI-GGVTLHSFAGAGLARESVDFLvsKIKKNK 389
                 89*********9.....467899*******************9997654446789**************.***************99999889****** PP

                 CCHHHHHC-SEEEEECGGGSBHHHHHHHHHHHHHHCT-...-SCCCC-EEEEE--TTS-----SSSSS---BGC...CSCHHHH.--.EEEE-S-STTT CS
        PIF1  95 klaellkktsliiwDEapmverecfealdrtlrdilkekeidkpFGGktvvlgGDfrQilPviekgsraeivaasikeSklWke.vk.vlkLtknmRll 191
                 k   ++ +t+++i+DE++mv+++++++l+++ r i+k+    +pFGG+++vl GDf+Q++Pv  ++ +++++++   eS+ Wk+ +  ++ Lt+++R++
  EPX71578.1 390 KSMTRWLRTKVLIIDEVSMVDADLMDKLEEVGRVIRKD---ARPFGGIQLVLTGDFFQLPPVP-DSGKEAKFCF---ESNTWKTaLDyTIGLTHVFRQK 481
                 *************************************8...78******************97.888999****...*******7668**********9 PP

                 T...........HHHHHHHHHHHCT---CCCCHH.................HHCHCCS---S.S--...........EEEESSCCHHHHHHHHHHCCSS CS
        PIF1 192 sesldetekkelkeFskwllkigdGkineedeeealieiPedlllkksedkieeivsevygd.llqeltdkeyleerailcptnedvdeiNnyvlsklp 289
                 +           +eF ++l++++ G+++e++ ++        +l            +  y d ll            ++l pt+++v++ N  ++++++
  EPX71578.1 482 D-----------EEFVNMLNELRLGRLSENSVRK------FRFL----------SREINYADgLLP-----------TELFPTRNEVERSNGMRMQQIH 542
                 9...........59**************999886......1122..........233346663444...........79******************** PP

                 S--EEEE-EEE...........ESBSSCHHCHHHCCTTSS-SCEEE-TT-EEEE-S--CTT-SC-TCEEEEEEE CS
        PIF1 290 geekeylssDsisksseeieeldalypteflnslkanglpnhvLkLkvGvpvmllrNldqsaGLcNGtrlivtq 363
                  +  +++s+Ds            ++ + ef ++l +n++++ +L Lk+ ++vml++N+d +  L+NG+ ++v+ 
  EPX71578.1 543 QDPITFTSIDS-----------GTVRDREFRDKLLQNCMAPAQLVLKINAQVMLIKNIDDQ--LVNGSLGKVIG 603
                 ***********...........77889**********************************..*******9986 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 5.8
                 CC.TSEECHHHHT-TTSSS-HHHH CS
        PIF1  65 llegGrtahsrfkiplekdeestc 88 
                  l++G + +sr +ipl  + + ++
  EPX71578.1 685 ELPNGEIQASRSQIPLILAYAISI 708
                 699************987766555 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.1   0.0   7.5e-26   4.2e-23       2     176 ..     297     499 ..     296     511 .. 0.83

  Alignments for each domain:
  == domain 1  score: 82.1 bits;  conditional E-value: 7.5e-26
      AAA_30   2 lnaeQaaavealltsgdrvavltGpAGtGKttalkalreaweaa.g...grviglAptgkaAkvLa.......eelgieastiakllkrlk....grar 85 
                 l++eQ+++++ ++++++   + tG AGtGK+ +l+++ ea++ +      rv++ A+tg aA +++       +++g++ ++++ l+++ k    +++r
  EPX71578.1 297 LSDEQKRILDMVVEQQH-SIFFTGSAGTGKSVLLRKIIEALKMKyRkqtDRVAVTASTGLAACNIGgvtlhsfAGAGLARESVDFLVSKIKknkkSMTR 394
                 799******99999997.999****************99998874367799***************777766658888999999999888899987788 PP

      AAA_30  86 lepgtllivDEagmvdtkqlaal...lkaaeka.....gakvilvGDerQlasVea.Ggvlrdlvea.....agigtaeLtevvRqkeseeraaalalr 170
                 + + ++li+DE++mvd++ +++l    + ++k+     g++++l GD  Ql++V   G+  + ++e+     a   t+ Lt+v+Rqk++e+ ++ ++lr
  EPX71578.1 395 WLRTKVLIIDEVSMVDADLMDKLeevGRVIRKDarpfgGIQLVLTGDFFQLPPVPDsGKEAKFCFESntwktALDYTIGLTHVFRQKDEEFVNMLNELR 493
                 9999***********999888762213445554677778***************7758888888887555444557889******************** PP

      AAA_30 171 egdaee 176
                  g+ +e
  EPX71578.1 494 LGRLSE 499
                 **9883 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.1   0.1   4.3e-14   2.4e-11       9     144 ..     311     448 ..     301     450 .. 0.78

  Alignments for each domain:
  == domain 1  score: 44.1 bits;  conditional E-value: 4.3e-14
      AAA_19   9 kekvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAakelrerlaalgaeatTiHrlalldfddlltealelle......eaeeekklq 101
                 +++ ++ t+ +GtGK+ +l++i++ l+   + + +++++ a tg Aa ++   +         +H++a  ++ ++    + +l       +++ ++ l 
  EPX71578.1 311 QQHSIFFTGSAGTGKSVLLRKIIEALKMKYRKQTDRVAVTASTGLAACNIGGVT---------LHSFAGAGLARES---VDFLVskikknKKSMTRWL- 396
                 5567889******************************************99666.........7777665554444...3343334445455566666. PP

      AAA_19 102 eeellivDEfqdvd.elqyrL..lkallgekkk......lllvGDpdQliyv 144
                 ++++li+DE+++vd +l+ +L  + ++  ++++      l+l GD  Ql++v
  EPX71578.1 397 RTKVLIIDEVSMVDaDLMDKLeeVGRVIRKDARpfggiqLVLTGDFFQLPPV 448
                 899***********99999996666777566668999999999999999986 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.1   1.1e-07   6.3e-05       4     129 ..     311     440 ..     307     444 .. 0.75

  Alignments for each domain:
  == domain 1  score: 23.3 bits;  conditional E-value: 1.1e-07
      AAA_22   4 tagilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsst..sskdllrellralglelkaerlsseellealeqalrarav...iellii 97 
                 ++ +++ tG +GtGK++llr++ e l+        r+++ +v +++st     ++    l+ +   + a r s + l++++ ++ ++  +   +++lii
  EPX71578.1 311 QQHSIFFTGSAGTGKSVLLRKIIEALKMK-----YRKQTDRVAVTASTglAACNIGGVTLHSFAGAGLA-RESVDFLVSKIKKNKKSMTRwlrTKVLII 403
                 78899********************9533.....24444455555555225556655566666666666.67788888999999888888********* PP

      AAA_22  98 DEaqhlr.s.eealeeL.rsllnl..srkgvqliLvG 129
                 DE+  ++   ++ lee+ r + ++     g+ql+L G
  EPX71578.1 404 DEVSMVDaDlMDKLEEVgRVIRKDarPFGGIQLVLTG 440
                 ******6536888888886666667888899999987 PP

>> Herpes_Helicase  Helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.19   1.1e+02      61      98 ..     314     360 ..     261     370 .. 0.67
   2 !   19.6   0.0   3.2e-07   0.00018     733     785 ..     705     756 ..     699     764 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.19
  Herpes_Helicase  61 aylitGtAGaGkstsiqalaenl........d.ClitgatvvAaqnl 98 
                          tG+AG+Gks  +  + e+l        d   +t++t +Aa n+
       EPX71578.1 314 SIFFTGSAGTGKSVLLRKIIEALkmkyrkqtDrVAVTASTGLAACNI 360
                      4567*********8777666665111122222245788888888776 PP

  == domain 2  score: 19.6 bits;  conditional E-value: 3.2e-07
  Herpes_Helicase 733 amtiaksqGlslekvAicFgnhknlklssvYvalsRatdseflv.mdvnPLrer 785
                      a+ i k+qG  l++v ++ g      + + YvalsRat+ + l  ++  P + +
       EPX71578.1 705 AISIHKAQGQTLDRVKVDLGRV--FEKGQAYVALSRATSQKGLQiLNFSPSKVM 756
                      889*****************87..99*************999852588887665 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.0   2.6e-07   0.00014      23      62 ..     302     340 ..     291     356 .. 0.86
   2 ?   -2.7   0.1       6.2   3.5e+03      80     115 ..     379     412 ..     373     416 .. 0.69

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 2.6e-07
       AAA_7  23 syllelllknkkpvllvGptGtGKtviikdllkkldkeky 62 
                 + +l+++++++++++++G++GtGK+v++++++++l+  ky
  EPX71578.1 302 KRILDMVVEQQHSIFFTGSAGTGKSVLLRKIIEALK-MKY 340
                 6799****************************9998.444 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 6.2
       AAA_7  80 diiesklekrrkgvygPpggkklvvFvDDlnmpake 115
                 d++ sk++k +k++     +k  v+ +D+++m   +
  EPX71578.1 379 DFLVSKIKKNKKSMTRWLRTK--VLIIDEVSMVDAD 412
                 677788888877766665555..4447999998776 PP

>> UvrD_C_2  UvrD-like helicase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.1   4.8e-07   0.00027       2      47 ..     703     741 ..     702     744 .. 0.81

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 4.8e-07
    UvrD_C_2   2 ayaltihkaQGsefpaVivfdpdlaaarmgelrrrlLYtavTRAre 47 
                 aya++ihkaQG+  + V v+      ++     +  +Y+a++RA+ 
  EPX71578.1 703 AYAISIHKAQGQTLDRVKVDLGR--VFE-----KGQAYVALSRATS 741
                 8******************4444..333.....4569*******85 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   1.6e-06   0.00091       9      79 ..     299     369 ..     294     420 .. 0.65

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 1.6e-06
  Mg_chelatase   9 eeakraleiaaaGgHnlllvGppGsGKtmlakrlpsllpplseeealevakiasvagkkeeekllkrrpfr 79 
                   +e+kr l++ +  +H+++++G++G+GK++l +++ + l    ++++  va  as   +  + + ++   f 
    EPX71578.1 299 DEQKRILDMVVEQQHSIFFTGSAGTGKSVLLRKIIEALKMKYRKQTDRVAVTASTGLAACNIGGVTLHSFA 369
                   57899***************************999988766655555555444444444555555555555 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   5.4e-06     0.003      14      51 ..     303     339 ..     297     431 .. 0.85

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 5.4e-06
      AAA_16  14 salervrsgrpelvllsGesGvGKsslvrellralekd 51 
                 ++l++v +++ ++++++G +G+GKs l+r++ +al+ +
  EPX71578.1 303 RILDMVVEQQ-HSIFFTGSAGTGKSVLLRKIIEALKMK 339
                 5677777777.8********************998877 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   5.7e-06    0.0032     115     156 ..     298     339 ..     256     349 .. 0.88
   2 ?   -2.9   0.0         5   2.8e+03      56     115 ..     669     728 ..     640     747 .. 0.72

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 5.7e-06
       T2SSE 115 kekiaevlrkavrerglilvsGgTgsGKttllyallkeinks 156
                 +++++++l   v+++ +i ++G  g+GK++ll  +++ ++ +
  EPX71578.1 298 SDEQKRILDMVVEQQHSIFFTGSAGTGKSVLLRKIIEALKMK 339
                 47899***************************9999988765 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 5
       T2SSE  56 alakldiseerplqdarlpekgvrlrvvllPvvagealviRkksakeltlddlgaeealk 115
                    +++i  +r   + +lp+++++   + +P++ + a++i k + + l+  ++   + ++
  EPX71578.1 669 NGGERTIVVQRETWNIELPNGEIQASRSQIPLILAYAISIHKAQGQTLDRVKVDLGRVFE 728
                 555667777777888888888888899999999999999998888888766655555555 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.1     4e-05     0.023       3      36 ..     314     347 ..     312     406 .. 0.77
   2 ?    1.4   0.0      0.26   1.5e+02     258     303 ..     671     727 ..     610     743 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 4e-05
     DUF2075   3 vvlVtGvaGtGKtvvllnllaeleddeeertavy 36 
                  ++ tG aGtGK+v+l +++ +l+++ +++t  +
  EPX71578.1 314 SIFFTGSAGTGKSVLLRKIIEALKMKYRKQTDRV 347
                 6899*******************55555555443 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.26
     DUF2075 258 l.........pWnleek..elkkpwaessdtleevgseytiQGleldyvgviiGpdl 303
                           +Wn e +  e +++ ++ +  l  + s++++QG  ld v v +G+ +
  EPX71578.1 671 GertivvqreTWNIELPngEIQASRSQIPLILAYAISIHKAQGQTLDRVKVDLGRVF 727
                 0333344444999999955555566666678999***************99999865 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   1.1e-05     0.006       3      32 ..     315     344 ..     313     419 .. 0.89

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 1.1e-05
                 EEEEC-TTTCHHHHHHHHHHHHCTS-SCCC CS
       NACHT   3 vilqGeaGsGKTtLlqklalawaegklpqg 32 
                 ++ +G aG GK++Ll+k+++a++ ++ +q 
  EPX71578.1 315 IFFTGSAGTGKSVLLRKIIEALKMKYRKQT 344
                 7899******************99987775 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.9       6.2   3.5e+03     151     151 ..     153     153 ..      15     201 .. 0.52
   2 ?   -2.8   0.2       7.9   4.4e+03      82     119 ..     161     197 ..     146     239 .. 0.63
   3 !   16.2   0.0   1.2e-05    0.0067       2      76 ..     297     366 ..     296     399 .. 0.88
   4 ?    2.5   0.1      0.18     1e+02     244     257 ..     435     448 ..     383     451 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 6.2
      AAA_11 151 k 151
                 k
  EPX71578.1 153 K 153
                 2 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 7.9
      AAA_11  82 egekykpkivRvgneeeriseavksvsleekvekrlek 119
                 + ++++  + R++ e+ + +++++  s ++++++ ++ 
  EPX71578.1 161 NANRTTSTLPRLVEEA-SRNSTIQTQSARSQQRHPIKR 197
                 4455555555555555.445555555555555444443 PP

  == domain 3  score: 16.2 bits;  conditional E-value: 1.2e-05
      AAA_11   2 lndsqreaiksalseseitliqGPPGtgKTktivellsqllsrrkseeeksakpriLvCapSNaAvDellerllr 76 
                 l d+q++ +  ++++++   + G  GtgK+  + +++++l     + + ++++ r+ v+a++  A +++    l 
  EPX71578.1 297 LSDEQKRILDMVVEQQHSIFFTGSAGTGKSVLLRKIIEAL-----KMKYRKQTDRVAVTASTGLAACNIGGVTLH 366
                 6799*************99*********************.....467899**************9999876555 PP

  == domain 4  score: 2.5 bits;  conditional E-value: 0.18
      AAA_11 244 kvvLvGDpkQLpat 257
                 ++vL GD  QLp++
  EPX71578.1 435 QLVLTGDFFQLPPV 448
                 799*********97 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.1   1.7e-05    0.0093       6      55 ..     298     350 ..     296     365 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.7e-05
                 SHHHHHHHHHHH.H-SEEEEE--TTSSTTHH..HHHHHHHHHHTTS-SEEEEE CS
        PhoH   6 tkeQkeylealk.kndivfaiGpaGtGKtyl..avalavealkkkkvkriilt 55 
                 + eQk++l+++  +++ +f +G+aGtGK+ l   +  a+++  +k+ +r+ +t
  EPX71578.1 298 SDEQKRILDMVVeQQHSIFFTGSAGTGKSVLlrKIIEALKMKYRKQTDRVAVT 350
                 679*******996777999**********994446778888888888888766 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.1   1.8e-05      0.01       2      68 ..     316     407 ..     315     423 .. 0.74

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.8e-05
                 EEESSTTSSHHHHHHHHHHHHTHE.................EEEEETTTCSSS...........STTHHHHHHHHHHHHHHHTS.......TSEEEEEE CS
         AAA   2 llyGppGtGKTllakavakelgve.................fleisgsellsk...........yvgesekkirelfkeakeka.......kpsilfiD 65 
                  ++G  GtGK+ l + +++ l+++                                          g + +++  l++++k+++       ++++l+iD
  EPX71578.1 316 FFTGSAGTGKSVLLRKIIEALKMKyrkqtdrvavtastglaA----------CniggvtlhsfaGAGLARESVDFLVSKIKKNKksmtrwlRTKVLIID 404
                 689*****************9866334444444444444334..........04444555555677888889999999998888899999988****** PP

                 TGG CS
         AAA  66 Eid 68 
                 E+ 
  EPX71578.1 405 EVS 407
                 *95 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.4    0.0087       4.9       3      40 ..     317     371 ..     315     424 .. 0.53
   2 !    6.7   0.0    0.0097       5.4     185     229 ..     705     742 ..     642     747 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0087
  Viral_helicase1   3 vhGvpGcGKStlirkllrts..liltvnrptaelltegk...............p 40 
                        G +G GKS l+rk+++       ++  + a+ ++ g+                
       EPX71578.1 317 FTGSAGTGKSVLLRKIIEALkmKYRKQTDRVAVTASTGLaacniggvtlhsfagA 371
                      5799*************98554222222222222222224444455566655553 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0097
  Viral_helicase1 185 vttvhevqGltfdkVtlvllketdlelisesrenllvAlTRhrks 229
                      +   h +qG+t d+V + l +         ++ + +vAl+R++++
       EPX71578.1 705 AISIHKAQGQTLDRVKVDLGRVF-------EKGQAYVALSRATSQ 742
                      56789***********9999444.......35678*******985 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.4   0.00012     0.068       9      47 ..     302     339 ..     298     420 .. 0.64

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 0.00012
    ATPase_2   9 keleeilerepneiyfiYGpegsGKtaLlkeiienledk 47 
                 k+++ ++ + +++ +f +G+ g GK+ Ll++iie l+ k
  EPX71578.1 302 KRILDMVVE-QQHSIFFTGSAGTGKSVLLRKIIEALKMK 339
                 566666666.56667889*****************9543 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.3   2.7e-05     0.015      18     110 ..     310     404 ..     298     425 .. 0.63

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 2.7e-05
                 SCSEEEEEEESTTSSHHHHHHHHCCSHCCCCCCBTEEEEEEEESXXHHHHHHHXXHHH.....HHCCCTTSSSS-STTSHHHHHHHHCCCTTEEEEEE CS
      NB-ARC  18 lqslvvalvGmgGvGKttlakqilnksdevegrFdsvawvvvsktdkseeiletilke.....LslseddleekeeveslkrklvrlLltkrfllvlD 110
                  q+  +++ G +G GK++l+++i++ +++  ++    + v+ s     ++i    l+      L +++ d    + ++  k+ + r L+tk  +l++D
  EPX71578.1 310 EQQHSIFFTGSAGTGKSVLLRKIIEALKMKYRKQTDRVAVTASTGLAACNIGGVTLHSfagagLARESVDFLVSKIKK-NKKSMTRWLRTK--VLIID 404
                 344679********************9999886666666777777666665443333300000334433333333333.555556666555..45555 PP

>> TrwB_AAD_bind  Type IV secretion-system coupling protein DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   4.7e-05     0.026      13      53 ..     309     354 ..     305     358 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 4.7e-05
  TrwB_AAD_bind  13 retqh.ilivGttGsGKtqalekllrai....rargdraivlDltG 53 
                     e+qh i+++G++G+GK++ l+k+++a+    r++ dr+ v   tG
     EPX71578.1 309 VEQQHsIFFTGSAGTGKSVLLRKIIEALkmkyRKQTDRVAVTASTG 354
                    5777747899***************987222255667777766665 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   0.00015     0.084       2      26 ..     315     339 ..     314     349 .. 0.91
   2 ?   -1.5   0.0       3.7   2.1e+03      95     119 ..     397     421 ..     365     430 .. 0.66

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 0.00015
                 EEEE--TTSSHHHHHHHHHHHH... CS
    NTPase_1   2 vfiTGppGvGKtTlvkkvlellkss 26 
                 +f TG+ G+GK+ l++k++e+lk +
  EPX71578.1 315 IFFTGSAGTGKSVLLRKIIEALKMK 339
                 899*******************865 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 3.7
                 HH-EEEE---STTGGG-HHHHHHHH CS
    NTPase_1  95 eadviviDEiGkmElkskkfkeave 119
                 ++ v++iDE+           e+v 
  EPX71578.1 397 RTKVLIIDEVSMVDADLMDKLEEVG 421
                 3569999999766655555555555 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   0.00012     0.065      33     147 ..     311     425 ..     299     440 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00012
        TniB  33 krmpnlllvGdsnnGKtmivekFarlhppekdedaekvpvlvvqappkpdekrlyaaiLealg.aplkararvskleqqvlrllrelkvrvLiiDEihn 130
                 +  +++ + G   +GK+++++k  +  + + ++++++v v +      ++  +   + ++  g a+ + +  vsk++++  ++ r l+++vLiiDE+  
  EPX71578.1 311 Q-QHSIFFTGSAGTGKSVLLRKIIEALKMKYRKQTDRVAVTASTGLAACNIGGVTLHSFAGAGlARESVDFLVSKIKKNKKSMTRWLRTKVLIIDEVSM 408
                 3.3899999***************9999999999999888777766666665544333333330223333356677777788889999*********99 PP

        TniB 131 llagsarkqreflnalk 147
                 + a  ++k +e+  +++
  EPX71578.1 409 VDADLMDKLEEVGRVIR 425
                 88877777777777666 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1    0.0001     0.056      13      82 ..     303     372 ..     297     379 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 0.0001
                      HHHHHHCTSSS-EEEECSTTSSHHHHHHHHHHHSTTTTS-EEEEETTTS-TTCHHHHHHEBSSSSSTTTS CS
  Sigma54_activat  13 eqikkvaktdlsvlitGesGtGKellaraiheaskrkekpfvavncaaipeelleseLFGhekGaFtGAe 82 
                      + +++v++++ s++ tG  GtGK++l r+i ea k k ++         ++ l + ++ G++  +F GA 
       EPX71578.1 303 RILDMVVEQQHSIFFTGSAGTGKSVLLRKIIEALKMKYRKQTDRVAVTASTGLAACNIGGVTLHSFAGAG 372
                      567889999*******************999966655554444444445677888888888888888885 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0    0.0001     0.058      75     128 ..     290     341 ..     275     355 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 0.0001
                  TTSEEEE--TTTHTTHHHHHHHCTT.SEEEEECSTTSSHHHHHHHHCTT-----S CS
  RsgA_GTPase  75 lgyevllvsaktkegleelkellkd.ktsvlvGqSGvGKStLinallpelelktg 128
                    ++ +++s ++k+ l+ +   +++ + +++ G+ G GKS L+ ++++ l++k +
   EPX71578.1 290 RAVPSIFLSDEQKRILDMV---VEQqHSIFFTGSAGTGKSVLLRKIIEALKMKYR 341
                  5566677766655444444...4443678899**************998877655 PP

>> Helicase_RecD  Helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   1.5   0.00041      0.23       3     111 ..     318     418 ..     316     426 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00041
  Helicase_RecD   3 tAdRGRGKSaalGlalaaliaegk...snilvtapskenvktlfeflakglealglkeeekkkkaekaelrvrkqrieyiapdellklkeqadllv 95 
                    t++ G+GKS +l ++++al  + +    ++ vta +  ++ ++     +++   gl +e+   +    +++++k++     +++ l    ++++l+
     EPX71578.1 318 TGSAGTGKSVLLRKIIEALKMKYRkqtDRVAVTASTGLAACNIGGVTLHSFAGAGLARES--VDFLVSKIKKNKKS-----MTRWL----RTKVLI 402
                    7889*********9999987665567799********99999999998888777765322..12221122222222.....22223....3479** PP

  Helicase_RecD  96 vDEAAaiplpllkkll 111
                    +DE ++++ +l++kl 
     EPX71578.1 403 IDEVSMVDADLMDKLE 418
                    ***********99985 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   0.00027      0.15       1      34 [.     315     347 ..     315     426 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00027
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkklklkkkdsv 34 
                   i+++G++g+GKS+l +++++al  k+  k++d+v
    EPX71578.1 315 IFFTGSAGTGKSVLLRKIIEALKMKY-RKQTDRV 347
                   789*******************9888.3333444 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00014     0.077      28      64 ..     311     351 ..     296     365 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00014
                 -SEEEEEEE-TTSSHHHH....HHHHHHHHHCTT--EEEEE CS
        MeaB  28 raqvvGltGvPGaGkstl....vealglelrrrGkrvavla 64 
                 + + + +tG+ G+Gks l    +eal +++r++  rvav a
  EPX71578.1 311 QQHSIFFTGSAGTGKSVLlrkiIEALKMKYRKQTDRVAVTA 351
                 468899**********8733336778888899999***987 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.5   0.00073      0.41       2      85 ..     315     417 ..     314     420 .. 0.73
   2 ?   -1.9   0.0       5.6   3.2e+03      65     107 ..     580     623 ..     554     628 .. 0.67

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00073
                 EEEE--SSSSHHHHHHHGGGGB......S--EEEEE--TT--HHHHH--B--............--------..........G-SEEEEESGGG--HHH CS
       AAA_5   2 vlLvGppGtgKselaerlaaal......nreveyvqltrdtteedlkgrreik...ngttslvdsplvraar..........egeilvlDEveraesev 81 
                 ++  G  GtgKs l +++ +al      ++  + v  + ++ + ++ g +  +    g ++ +   lv +++          + ++l++DEv +++ + 
  EPX71578.1 315 IFFTGSAGTGKSVLLRKIIEALkmkyrkQTDRVAVTASTGLAACNIGGVTLHSfagAGLARESVDFLVSKIKknkksmtrwlRTKVLIIDEVSMVDADL 413
                 6889******************88886555556666666666666655555447653333333344666666888899999999999999999999999 PP

                 HHHH CS
       AAA_5  82 lnsL 85 
                 +++L
  EPX71578.1 414 MDKL 417
                 8887 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 5.6
                 G-SEEEEESGGG--.HHHHHHHHHHHHSSEEE..-SSSEEE--- CS
       AAA_5  65 egeilvlDEverae.sevlnsLlslleerrllleeggelvkakn 107
                 +++++++  ++       l++++  ++e+++++e+ + +++ +n
  EPX71578.1 580 NAQVMLIKNIDDQLvNGSLGKVIGFIDEETYQIEKKDAEMQGRN 623
                 55555555555544455677888889999999998888887766 PP

>> SH3_13  ATP-dependent RecD-like DNA helicase SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   0.00053      0.29      25      58 ..     576     609 ..     563     618 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00053
      SH3_13  25 vfrvgDkVmqlkNnydkgvfNGDiGiikei.dkee 58 
                 v++++ +Vm +kN  d ++ NG +G++  + d+e+
  EPX71578.1 576 VLKINAQVMLIKNIDD-QLVNGSLGKVIGFiDEET 609
                 589999******9877.899*******99855444 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00044      0.24      18      46 ..     308     339 ..     297     347 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00044
                 H...TEEEEEEESTTSSHHHHHHHHHHHTT-- CS
        TsaE  18 l...gdvilLeGdLGaGKTtlvrglakalgve 46 
                 +   ++ i+++G  G+GK++l r++++al+++
  EPX71578.1 308 VveqQHSIFFTGSAGTGKSVLLRKIIEALKMK 339
                 2333556**********************986 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0     0.052        29      44      63 ..     309     328 ..     298     359 .. 0.84
   2 ?    4.7   0.1     0.041        23      97     123 ..     386     412 ..     373     426 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.052
   IstB_IS21  44 iekkenivllGpsGvGKshl 63 
                 +e++++i ++G +G+GKs l
  EPX71578.1 309 VEQQHSIFFTGSAGTGKSVL 328
                 789999************87 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.041
   IstB_IS21  97 gklaralkrllkvdllilDdlgllpld 123
                  k ++ ++r l++++li+D++++++ d
  EPX71578.1 386 KKNKKSMTRWLRTKVLIIDEVSMVDAD 412
                 56788999*************998876 PP

>> GAPT  GRB2-binding adapter (GAPT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   0.00056      0.31      32      77 ..       7      52 ..       3      71 .. 0.73
   2 ?   -2.6   0.1       7.9   4.4e+03      38      83 ..     164     189 ..     159     196 .. 0.49

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00056
        GAPT 32 hwkhrestrftLPkflqrrssrkk.dvtktlslsaevisakhkisvq 77
                + kh  s rf LP+++qr ++++   + +  + ++++i   h+ s +
  EPX71578.1  7 FVKHSRSFRFNLPRMFQRAQQKNSlAYSQA-KENSSIIRDIHNHSSD 52
                689****************99999555554.4566666666666554 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 7.9
        GAPT  38 strftLPkflqrrssrkkdvtktlslsaevisakhkisvqtkdkks 83 
                  t+ tLP++++                      ++++++qt+  +s
  EPX71578.1 164 RTTSTLPRLVEEA--------------------SRNSTIQTQSARS 189
                 3344444444433....................3334445555544 PP

>> UvrD-helicase  UvrD/REP helicase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.48   2.7e+02     170     238 ..      31     101 ..       9     124 .. 0.64
   2 ?   -1.4   0.1       2.4   1.4e+03     108     164 ..     121     197 ..     110     241 .. 0.64
   3 ?    8.5   0.1    0.0023       1.3       8      57 ..     307     356 ..     297     401 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.48
                    HHCCCHHHHHCHHHHHHHHHHHTTCCTTHHCHSS..TSCSHHHHHHHHHHHHHHHHHHHHTCEEHHHHHHH CS
  UvrD-helicase 170 eelslskskaeelrelvskakekqlspkelkkaf..ekasdlqkkiaeflkeyqeqkkeenalDfsdllha 238
                     + s +k     +r + +   ++ +++    ka   ++ ++     +ef ++++++++e++a+D sd ++ 
     EPX71578.1  31 LAYSQAKENSSIIRDIHNHSSDGFQTSAPASKAGhhPSPNPTAPLKREFSNTILQNLDENDAFDSSDPALP 101
                    33333344444444444444444444444444446688899999999*****************9997665 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 2.4
                    HHGGTTSHTTTEEECHHHHH.....................HCCHHHHHHHHHSCHSHTTTTHHHHHHHHHHHHHHCC CS
  UvrD-helicase 108 eanrigldpnfrildeedee.....................dlkqqellkelleksaddslnldkkkleklikelsks 164
                    ++++ ++d +f + +e d++                      +++++ l +l+e +a  + +++++ ++++ ++ +k 
     EPX71578.1 121 YIDENDIDDDFAVESEIDQKaipwssspvehtkltgsmianANRTTSTLPRLVE-EASRNSTIQTQSARSQQRHPIKR 197
                    566777888888888888888887777777777777777766666677777776.44445666666666554443333 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.0023
                    HHHS-SSEEEEEE-TTSSHHHHHHHHHHHHHHTSS.STGGGEEEEESSHHH CS
  UvrD-helicase   8 aiaslggpilveAsAGsGKTfvlaerilrlikeee.iepdrilvvTFTnkA 57 
                     ++  + +i+   sAG+GK+ vl  +i++ +k +   + dr+ v   T  A
     EPX71578.1 307 MVVEQQHSIFFTGSAGTGKS-VLLRKIIEALKMKYrKQTDRVAVTASTGLA 356
                    445577889999*******7.788999999998862444455555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (788 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       664  (0.037035); expected 358.6 (0.02)
Passed bias filter:                      522  (0.0291148); expected 358.6 (0.02)
Passed Vit filter:                        92  (0.00513135); expected 17.9 (0.001)
Passed Fwd filter:                        32  (0.00178482); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              32  [number of targets reported over threshold]
# CPU time: 0.85u 0.33s 00:00:01.18 Elapsed: 00:00:00.52
# Mc/sec: 4552.35
//
Query:       EPX71579.1  [L=297]
Description: sphingosine hydroxylase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.2e-25   87.7  14.0    8.2e-25   87.7  14.0    2.1  2  FA_hydroxylase  Fatty acid hydroxylase superfamily


Domain annotation for each model (and alignments):
>> FA_hydroxylase  Fatty acid hydroxylase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.3     0.042   7.5e+02      54      90 ..      15      52 ..       2      74 .. 0.60
   2 !   87.7  14.0   4.6e-29   8.2e-25       2     133 .]     135     270 ..     134     270 .. 0.93

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.042
  FA_hydroxylase 54 lla.llllllllllgplsalllvlvlaallelliHsgl 90
                    ++  l  +l+++++  + a+l++l   ++ ++ iHs  
      EPX71579.1 15 TASlLSPILVYWIASGFFAFLHWLNSPFFEKYRIHSPE 52
                    33323344444444467777777777777777777773 PP

  == domain 2  score: 87.7 bits;  conditional E-value: 4.6e-29
  FA_hydroxylase   2 llallledfveYwvHrllHrvkllwrrlHkvHHsseaptalaalrahpleallla.llllllllllg.plsalllvlvlaallelliHsglhvsl 94 
                     ++a+++ d+++Y++Hr lH +k l++++H+ HH+ + p a+ al++hp+e l+l+ + + +++l++g ++ +++++++l +l ++  H+g+ +++
      EPX71579.1 135 MFAFFIIDTWQYFWHRYLHYNKKLYNMIHAHHHRLQVPYAMGALYNHPFEGLILDtFGAGVAYLVAGlSPNQAIVFFTLSTLKTVDDHCGYLFPY 229
                     67899**************9777********************************666668888888***********************99*** PP

  FA_hydroxylase  95 gwllerllatpraHrlHHskne.egnfgv.llslwDrlfgT 133
                     ++l  ++ + +r+H+lHH+ +  ++nf++ ++++wD+++gT
      EPX71579.1 230 DPLQIFFANNARYHDLHHQPYGfQKNFSQpFFTFWDHVLGT 270
                     ****9**************777689***977*********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (297 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       494  (0.0275531); expected 358.6 (0.02)
Passed bias filter:                      302  (0.0168442); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 2036.96
//
Query:       EPX71580.1  [L=615]
Description: transmembrane transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.8e-26   91.4  31.0    1.8e-25   89.4  28.8    2.5  2  Xan_ur_permease  Permease family


Domain annotation for each model (and alignments):
>> Xan_ur_permease  Permease family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0     0.037   6.6e+02       5      28 ..      48      71 ..      46      80 .. 0.85
   2 !   89.4  28.8     1e-29   1.8e-25      33     385 ..      96     478 ..      87     481 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.037
                     HHHHHHHHHHHHHHHHHHHTTTS- CS
  Xan_ur_permease  5 llglQhllamfaalvvvPllvgda 28
                      +gl+++ am + l v++ ++ d 
       EPX71580.1 48 RAGLTTFCAMAYILAVNASIMIDT 71
                     589**************9999877 PP

  == domain 2  score: 89.4 bits;  conditional E-value: 1e-29
                      ......H.HHHHHHHHHHHHHHHHHTTT-----EEE-GGGHHHHHGGG-....HHHHHHHHHHHHHHHHHHHHHHHTT-SH.HHHHH--HHHHH CS
  Xan_ur_permease  33 eelr.qlisatllasGiatllqllifgirlpillgssfafvtalmialGsaedieialagllgallvagvlfilisltglrgrlarlipPvvtg 125
                      +++   +++at  +s ++++ + +++++++ ++ g++++++    ++ G +    + ++++l+a++v g++f+ + ++glr++lar+ip     
       EPX71580.1  96 QNFHrDVVTATAAISCLSSVCMGVFANMPVGMAPGMGLNAYF-AYQVVGYNGSGRVPYREALLAVFVEGFIFTGLTIIGLRQWLARAIPASLKF 188
                      55555899999999**************************99.66777767789**************************************** PP

                      HHHHHHHHHHHHHHHHHTTSS-...BTT.B---HHHHHHHHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHHHHHHHTTSSHH......... CS
  Xan_ur_permease 126 pvvlliGlslaqiavkkvgggwaa.vegltvvslkllllavvvllvilllsvflkglfsqlpiLigiiagwllalfmgivnlspe......... 209
                      ++  +iGl l+ i+++  +g+ +   +     +++ ++l+   +    +  ++    +++  + +gi++g ++ +++ +  ++++         
       EPX71580.1 189 ATGAGIGLYLTIIGLTPSAGLGVVgHS-----ASDIVGLGGCPPEYLSADYTCDGHELQSARMWVGIFCGGVFTAILMMYRFKGAvlagialvt 277
                      **************9988888755333.....46666666666666666666666666666666666666666666666666666666666666 PP

                      ..........................HHS-SS-----------HH..H.HHHHTHHH.H.HHHHHHHHHHHHHHHHHTS-TII...IIIHHHHH CS
  Xan_ur_permease 210 ..........................vseapwfqlpsplkfgtplfnlgliltvlaval.vavvesvGdiravakvvgrslkp...kpdlrral 273
                                                 +  ++ ++ s+l  ++++++ g+++++l+++l v +++++G+++ +a  +g+ +++     +   a+
       EPX71580.1 278 iaswprrskitmfphtdsgnsdfdffKKVVSFRKINSILVAQNWKVTGGQFAVALITFLyVDIMDTTGTLYSMAHYAGLVDQRtqdFEGSAVAY 371
                      666666666666666899999*9976333466677778888888899999999888777478******99888777766666621155556689 PP

                      HHHHHHHHHHHHHT---EEE-HHHHHHHHHHTB--HHHHHHHHHHHHHHT--HHHHHHHTTS-HHHHHHHHHHHHHHHHHHHHHHHHHTTS-SH CS
  Xan_ur_permease 274 ladGlatllsgllGalpvttyaeniGvvaltkvasrrvmvtagvilillglipklaallssIPepvlgGvllvvfgmiaasgvsnlqtvdldsa 367
                      l+d l++ +++l+G++pvt+++e+  +++++    +++++++ vi i++ ++ ++a+ +ssIP  + +G +lv++g++++ + + ++++ l ++
       EPX71580.1 372 LVDALSISIGSLFGVSPVTAFIESGSGISAG----GKTGLVGVVIGICFFISLFFAPIFSSIPVWA-TGSTLVLVGSLMMKSSALINWSYLGDS 460
                      99*****************************....*******************************.999************************ PP

                      HHHHHHHHHHHHHHH--- CS
  Xan_ur_permease 368 rnllivavslvlGlgvat 385
                        ++i+   + l+ ++a+
       EPX71580.1 461 IPAFITIALMPLTYSIAY 478
                      *************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (615 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       700  (0.0390429); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.27s 00:00:00.89 Elapsed: 00:00:00.47
# Mc/sec: 3968.56
//
Query:       EPX71581.1  [L=344]
Description: SAGA complex subunit Hfi1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.9e-42  144.6   0.4    5.4e-42  144.1   0.4    1.1  1  SAGA-Tad1    Transcriptional regulator of RNA polII, SAGA, su
  ------ inclusion threshold ------
      0.044   12.8   0.0      0.081   12.0   0.0    1.3  1  SNF2_assoc   Bacterial SNF2 helicase associated
       0.23   12.1   0.8       0.41   11.2   0.8    1.3  1  AROS         Active regulator of SIRT1, or 40S ribosomal prot
       0.27   11.6   1.2         13    6.3   0.2    2.9  3  Uteroglobin  Uteroglobin family


Domain annotation for each model (and alignments):
>> SAGA-Tad1  Transcriptional regulator of RNA polII, SAGA, subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.1   0.4   1.2e-45   5.4e-42       7     233 ..      25     250 ..      22     252 .. 0.88

  Alignments for each domain:
  == domain 1  score: 144.1 bits;  conditional E-value: 1.2e-45
   SAGA-Tad1   7 dleelkeqlkkkLgperwekYfellsrFlsgklskkEldklvdriLgre.nlhLHNqLllsIlkNalrespdclaktp.psatakkkksslkkspkksr 103
                 dl + +++l++ Lg ++ e Y   +++F++g+ls+kEl++++ ++ +++  ++LHN+++lsI++  +r++++ ++k p  ++  k++       +kk  
  EPX71581.1  25 DLLDFISELQSLLG-NEYEAYTMCVTDFIVGQLSRKELNNVLSKYSNNSrFVQLHNRIILSIIRDLQRSEKPAVNKLPwMKR--KRSD-GALFVHKKFT 119
                 89999*********.99*****************************99989***************9998885554442222..2222.3356688999 PP

   SAGA-Tad1 104 sgdsqeerlkkrvmslpprdrkrlkaitkeag.........vl.aeesskpkisvvseeetekrekennskewsqeirspvaaPLgsesgelpdtdsLr 192
                 s++ q ++lkk++ sl+++dr r+ka+ ke++         +l ++ ++ pki+v+ ++ ++          + ++i+ ++ aPL+se+ e pd dsL+
  EPX71581.1 120 SHNLQAKNLKKIILSLSSKDRARIKAVLKENNglqphlpglLLeTRIAKLPKIPVSRDKLNS---------VFVNDIKAGYVAPLASETLEVPDADSLK 209
                 *****************************999666666665444444999999988888777.........5789************************ PP

   SAGA-Tad1 193 kRmekiaeeeGLvggvsadcaellnlaldvyLKnliescid 233
                 +R++ ia e+GL gg+++ + +++  +l+++LKn+ ++c++
  EPX71581.1 210 ERITAIALENGLLGGIEKSVPDVILAGLENHLKNIFSKCFS 250
                 ***************************************98 PP

>> SNF2_assoc  Bacterial SNF2 helicase associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   1.8e-05     0.081     264     293 ..      51      80 ..      48      92 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1.8e-05
  SNF2_assoc 264 fdidgideeElaeilkayrekkkYyrLkdG 293
                 f +++++++El+++l++y ++ ++++L + 
  EPX71581.1  51 FIVGQLSRKELNNVLSKYSNNSRFVQLHNR 80 
                 77899**********************985 PP

>> AROS  Active regulator of SIRT1, or 40S ribosomal protein S19-binding 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.8   9.2e-05      0.41      10      94 ..      67     152 ..      61     156 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 9.2e-05
        AROS  10 skasalelipkkkkiirkqlkrlkkeagkaks.kktvkdkveksaveefrkrqkkdhleeNlkylssakskldeevtkkilkrnrg 94 
                 ++++    ++ + +ii    + l++ +++a +    +k+k++  a+   +k ++++   +Nlk++  + s  d+   k +lk n+g
  EPX71581.1  67 KYSNNSRFVQLHNRIILSIIRDLQRSEKPAVNkLPWMKRKRSDGALFVHKKFTSHNLQAKNLKKIILSLSSKDRARIKAVLKENNG 152
                 56677788999**************9999988788999999999**999999*************544467788888888888877 PP

>> Uteroglobin  Uteroglobin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0     0.046   2.1e+02      31      55 ..      48      74 ..      37      81 .. 0.82
   2 ?    6.3   0.2    0.0028        13      58      82 ..     124     148 ..     112     150 .. 0.86
   3 ?   -1.3   0.0      0.63   2.8e+03      27      62 ..     301     336 ..     299     337 .. 0.75

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.046
                 HHHHH..HS-HHHHHHHHHTT---HHH CS
  Uteroglobin 31 vekfl..egseeeYkeeLqkynpdpea 55
                 v++f+  + s +e+++ L+ky++++  
   EPX71581.1 48 VTDFIvgQLSRKELNNVLSKYSNNSRF 74
                 78999655699**********999765 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0028
                  HHHHHHHHHTTS-HHHHHHHHHHHH CS
  Uteroglobin  58 alaelKqcvdklsnetkenvaklle 82 
                   +++lK+ +++ls +++++++ +l+
   EPX71581.1 124 QAKNLKKIILSLSSKDRARIKAVLK 148
                  5789****************99986 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 0.63
                  HHHHHHHHHHS-HHHHHHHHHTT---HHHHHHHHHH CS
  Uteroglobin  27 leevvekflegseeeYkeeLqkynpdpeaeealael 62 
                  +e+++++  ++  + + +++++ n++++++ea+a l
   EPX71581.1 301 MEDEINTATKDFSSPLPDYMKPMNAPSDEREAVASL 336
                  677777777777777777888888999999998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (344 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       474  (0.0264376); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 2363.66
//
Query:       EPX71582.1  [L=540]
Description: Man5GlcNac2-PP-Dol translocation protein Rft1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   6.8e-135  450.7  24.6   7.7e-135  450.5  24.6    1.0  1  Rft-1     Rft protein


Domain annotation for each model (and alignments):
>> Rft-1  Rft protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  450.5  24.6  4.3e-139  7.7e-135       1     507 [.      21     529 ..      21     533 .. 0.95

  Alignments for each domain:
  == domain 1  score: 450.5 bits;  conditional E-value: 4.3e-139
       Rft-1   1 ssakgatflillQlisrlitFllNqllvrflsprilG.itvrLelllstiLFlSREairlavlriksk...............kkkseslqkvvnlali 83 
                 ss +g+ ++i++Q isr +tF+lNql +rf+spr ++  ++++e+l stiLF+SRE++rla++r++s+               k +s +l  v n +li
  EPX71582.1  21 SSSRGLGSSIFFQSISRGLTFVLNQLTIRFTSPRAYAySSIHFEILRSTILFISRESVRLAMQRMPSQencledttelpipdsKYRSGRLLLVKNASLI 119
                 6899*********************************9*******************************************999*************** PP

       Rft-1  84 pvligivlsivlilwqyslsneellqlpyfklsvllvalsiiiellseplyvvaqaelnvklrskleslavlvrclvtfaiivlfekeakegiailaFa 182
                 +v++giv+s++++l++      ++ ++py ++++ll+ ++ ++ llsep+y + +++ +++ ++++e+l ++ +++++f+i ++f++++   +++l+Fa
  EPX71582.1 120 TVYVGIVVSTLVALFY----LYAMPTFPYKTTCILLYSFASLLYLLSEPYYQILHWKRQYSPTASAEGLGTISNTITSFSIFLVFQNRN---LSVLPFA 211
                 *************999....6677889************************************************************96...9****** PP

       Rft-1 183 lgqlaysltllllyyvdflknlkkkkkfslkltkiklkeekksyyfdkdllelfkkvffqlilKhlLteGdkliisllctveeQGiYalvsnyGSLvaR 281
                 lg+l++s++++++ y ++     ++k+  + ++++   ++ ks+++++++l +++++ f+l+lKhl+t Gdk++i+++++++ QG Yal+snyGSL+aR
  EPX71582.1 212 LGTLMESVVYFISLYSTA-----NEKSLFILPRRVL--HDGKSILWERSFLGVISSHSFHLLLKHLMTTGDKIMIAWYAAPSVQGPYALASNYGSLIAR 303
                 *********999999988.....6788889999987..89999******************************************************** PP

       Rft-1 282 lvfaPiEEslrlffakllsskkskknlkesvevLlnllklylylsllivifGpsyssflLqlliGskwsstsvldllrvYclyipllalNGilEaFvqs 380
                 ++f+P+EE++r++fa+l+ ++ +k + k+++++Ll++lkly+yl++++v fG++y++++L++ +G++w+s++ + +l++Y++yip++a+NG+lEaF+ s
  EPX71582.1 304 ILFRPVEEHSRIVFAQLT-HSPEKGDQKKATTLLLWILKLYFYLTMFVV-FGYNYANIVLKFGAGKQWASDESAGVLSWYAFYIPFMAVNGVLEAFFVS 400
                 ******************.9999***********************998.************************************************* PP

       Rft-1 381 vassaqllkqsylmvvfSvvfllasyllievlklgaeGlilaNivNmllRiiyslrfikkfykklklekslrellpsalvvalllvsliigyv...... 473
                 +ass +ll+q++++++ ++++++++ +++++l+lga+Gl+laNi N+++Ri++ +rf++k++      + +++l+p +l+++l++++ i + +      
  EPX71582.1 401 TASSFELLSQGRIFLLSTILYFVSGKVFLDWLSLGAHGLVLANITNLSIRILFVVRFVHKNFPL----FGFSKLMPRPLIIILAVLFSIFSRTllhrfq 495
                 ************************************************************9988....788*********9997776666666699877 PP

       Rft-1 474 velsknllqlligillalllllaillkerellke 507
                 +++   ll ++ + +la+++ +ail+ ++++   
  EPX71582.1 496 EHNIGLLLFVASAPTLAMIYGVAILVLDKDVSTF 529
                 7777888889999999999999999999988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (540 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       778  (0.0433934); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.26s 00:00:00.89 Elapsed: 00:00:00.47
# Mc/sec: 3455.42
//
Query:       EPX71583.1  [L=542]
Description: imidazoleglycerol-phosphate synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.6e-44  152.1   0.3    7.3e-44  149.9   0.3    2.1  1  His_biosynth  Histidine biosynthesis protein
    6.1e-22   78.3   0.0      1e-21   77.6   0.0    1.3  1  GATase        Glutamine amidotransferase class-I
      7e-07   29.3   0.0    7.2e-06   26.0   0.0    2.3  1  SNO           SNO glutamine amidotransferase family
    4.8e-06   26.3   0.0      2e-05   24.3   0.0    1.9  2  GATase_3      CobB/CobQ-like glutamine amidotransferase domai
  ------ inclusion threshold ------
       0.16   11.0   0.0       0.37    9.8   0.0    1.5  1  Dus           Dihydrouridine synthase (Dus)


Domain annotation for each model (and alignments):
>> His_biosynth  Histidine biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.9   0.3     2e-47   7.3e-44       1     227 [.     231     523 ..     231     525 .. 0.85

  Alignments for each domain:
  == domain 1  score: 149.9 bits;  conditional E-value: 2e-47
                   EEEEEEEE...ETTEEEEECTTCS.........TCEEEETTSHHHHHHHHHHHT-SEEEEEEHHHHCTT...HHHHHHHHHHHHHH-SSEEEEESSS CS
  His_biosynth   1 riipalDl...kdGkvVrlvkGdr.........fqelryagdpvelakryeeegadelhvvDldaakeg...reanldlveeiaeevfipvqvGGGI 82 
                   r+i +lD+   + G  V ++kGd+           e r  g+pvel +ry eegade++++ ++  +++      +l+++++ a++vf+p++vGGGI
    EPX71583.1 231 RVIACLDVrsnDAGDLV-VTKGDQydvrekaavGGEVRNLGKPVELCQRYFEEGADEVVFLNITSFRNCplvDAPMLQVLAKAAQTVFVPLTVGGGI 326
                   79******666567778.89***99***9999999999**************************99977222466789999***************9 PP

                   SSH...........HHHHHHHHCT-SEEEESHH.............HHH-THHHHHHHHHHCGGGEEEEEEEEE.........C............. CS
  His_biosynth  83 rsl...........edveelleagadkviigta.............avknpelikelaekfgsqkivvaiDarr.........g............. 133
                   r++           e + +++++gadkv+ig+               ++    i+ ++ ++g q++v++iD +r         +             
    EPX71583.1 327 RDVvdpdgtvysaaEVAGTYFRSGADKVSIGSDavyaaeqfysndkKLTGTTAIETISAAYGCQAVVISIDPKRqyvkspeetKhhaiktpyrgpng 423
                   886222222222225577899999********9555555554444444445569********************77776665505666677777889 PP

                   .....EEEEETTTTEEEEEEHHHHHHHHHHTT-SEEEEEETTTTTTSS---HHHHHHHHHHHSSEEEEESS--SHHHHHHHHHTTC.SEEEESHHHH CS
  His_biosynth 134 .....ykvaikgwreetgldavelakkleelgageilltdidrdGtlsGpdleltkelaeavkipviasGGvgsledlkelksegv.davivgsaly 224
                        y++++kg+re  ++d+velak++e +gage+ll+ +d+dG+ +G+d+el++ ++++vkipvias G+g  e+++++++++  da++++ +++
    EPX71583.1 424 eeyawYQCTVKGGREYRDMDVVELAKACEAMGAGEVLLNCMDQDGSNAGYDIELIRLVKQSVKIPVIASSGAGVSEHFEHVFKATDcDAALAAGIFH 520
                   99********************************************************************************88888********** PP

                   TTS CS
  His_biosynth 225 ege 227
                    ++
    EPX71583.1 521 RKT 523
                   986 PP

>> GATase  Glutamine amidotransferase class-I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.6   0.0   2.9e-25     1e-21       2     175 ..       5     194 ..       4     205 .. 0.86

  Alignments for each domain:
  == domain 1  score: 77.6 bits;  conditional E-value: 2.9e-25
                 EEESSTSTHHHHHHHHHHTT-EEEEEETTSHHHHHHHTHHSTSEEEEEEESSCTT.......TTTHHHHHHHHCTSTS-EEEETHHHHHHHHHTTT... CS
      GATase   2 liDnydsvtenlvhalvelgvkvevvpidasaeeilellknpdgilvsgGpgspg.......vegkieaikearenkiPiLGICLGmQllaiefgr... 90 
                 ++D++++++++lv+a+ +lg++ve ++     eei         +l+ +G+g+ g        eg +e ++e++ +++P++ +C G Q+l++ + +   
  EPX71583.1   5 ILDYGSGNVRSLVNAIQHLGYDVEWIRSP---EEIA-----KAECLIFPGVGNFGfvcdslaKEGYLEPLREYALSGKPFMAVCVGIQALFEGSVEape 95 
                 78******************888877755...4442.....478*************9999888999999998889****************9999666 PP

                 .....EEE.........EEECEEEEEEEEEEEETTT.CGGTTTTSEEEEEEEEEEEEESG.CHHHTTEEEEEEEETTEEEEEEEEETTTEEEESSBTTS CS
      GATase  91 .....kvv.........kekekehhggtmrlgddet.allyglknevierhrHryevnpk.elepaglevtakseddeelmeiiekknpfvgvQFHPEs 173
                                  k k+ +h g+++     +t +++ygl +  + ++ H+y++  +   +p++++v+ +   de ++++i kkn f ++QFHPE+
  EPX71583.1  96 skglgI-FpglvqkfqsKDKSVPHVGWNSCAVRSNTeKEFYGLRPHDKFYFVHSYMMPADnLQLPSDFHVATTRYGDEMFVGAILKKN-FLATQFHPEK 192
                 666650.15555677798889********98887778*******************99888779*************9*********9.*********8 PP

                 TT CS
      GATase 174 ts 175
                 + 
  EPX71583.1 193 SG 194
                 75 PP

>> SNO  SNO glutamine amidotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.0     2e-09   7.2e-06       6     173 ..      11     194 ..       9     208 .. 0.71

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 2e-09
                 SSHHHHHHHHHHTTSEEEEE-SGGGGCC-SEEEE-S.S-HHHHHHHHHHTT-HHHHHHHHHTT.--EEEETHHHHHHCCE.ETTBSS-SS--CCEEEET CS
         SNO   6 GaveehveaikkclaenktvkrkedlaevdaliiPG.GestamskliertglyedllefvknsekvvlGtCaGlillske.lenelvktlellkvkvkr 102
                 G+v+  v+ai++ +++   ++++e++a+ ++li PG G+   +   + + g++e+l+e++  + k+ +  C G+  l ++ +e  + k l+++   v++
  EPX71583.1  11 GNVRSLVNAIQHLGYDVEWIRSPEEIAKAECLIFPGvGNFGFVCDSLAKEGYLEPLREYALSG-KPFMAVCVGIQALFEGsVEAPESKGLGIFPGLVQK 108
                 889999******************************7788888999999***********999.**********8886651455577777776544433 PP

                 ..........TTT-SCCGEEEEEEEETTTC..SEEEEEESS--EEEEE-...TTTCEEEEECTTEEEEEE.ETTEEEESS-GGGST CS
         SNO 103 ..........nafGrqvdsfekeldfknli..ekftavfiraPvieeil..ddeavkvlyeldgeivvak.qkkilatsfhPelae 173
                             +   +  ++ e +f +l   +kf+ v       +++   +d +v   + +d   v+a  +k++lat fhPe + 
  EPX71583.1 109 fqskdksvphVGWNSCAVRSNTEKEFYGLRphDKFYFVHSYMMPADNLQlpSDFHVATTRYGDEMFVGAIlKKNFLATQFHPEKSG 194
                 1111100000444455555667778888888889987765544445554014555555555555778887788**********875 PP

>> GATase_3  CobB/CobQ-like glutamine amidotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.3   0.0   5.6e-09     2e-05      25     116 ..      25     107 ..       8     189 .. 0.84
   2 ?   -0.9   0.0       0.3   1.1e+03     168     187 ..     327     347 ..     308     349 .. 0.70

  Alignments for each domain:
  == domain 1  score: 24.3 bits;  conditional E-value: 5.6e-09
    GATase_3  25 vrvrfvplkdeslgedadlvilpGgkdtiqdlallresgldeaikeaaeaggpvlgiCGGlqmLGeeiedpegvegeageveglglLdiete 116
                  +v++++ + e++++ a+ +i+pG  +  +   +l+++g  e ++e+a +g+p +++C G q L e  +++        e++glg+++  ++
  EPX71583.1  25 YDVEWIR-SPEEIAK-AECLIFPGVGNFGFVCDSLAKEGYLEPLREYALSGKPFMAVCVGIQALFEGSVEAP-------ESKGLGIFPGLVQ 107
                 5688899.8899965.************************************************99887655.......6789999986543 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.3
    GATase_3 168 g...ekdGavkksedgnvlGtYl 187
                 +   + dG v++    +v+GtY+
  EPX71583.1 327 RdvvDPDGTVYS--AAEVAGTYF 347
                 3367889***66..889*****7 PP

>> Dus  Dihydrouridine synthase (Dus)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0    0.0001      0.37     139     211 ..     443     514 ..     432     523 .. 0.86

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.0001
                 .HHHHHHHHHHCT-SEEEEESSECCCTT-CG--CHHHHHHHHH-SS-EEEESS--SHHHHHHHHHHH--SEEE CS
         Dus 139 nalelakiveaaGaqaltvHgRtraqnyegtadweaIkevkqavsipviaNGdIkdaedaqaileetGadgvm 211
                 + +elak+ ea Ga ++ + +   ++++++  d+e I+ vkq+v+ipvia  +    e  +++ + t +d+ +
  EPX71583.1 443 DVVELAKACEAMGAGEVLLNC-MDQDGSNAGYDIELIRLVKQSVKIPVIASSGAGVSEHFEHVFKATDCDAAL 514
                 6899***************99.567788889*******************98888888888888888888865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (542 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       315  (0.0175693); expected 358.6 (0.02)
Passed bias filter:                      297  (0.0165653); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.56u 0.24s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 3525.31
//
Query:       EPX71584.1  [L=214]
Description: 2' O-ribose methyltransferase Mrm2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.7e-53  181.3   0.0      2e-53  181.1   0.0    1.0  1  FtsJ             FtsJ-like methyltransferase
     0.0011   18.8   0.0     0.0022   17.9   0.0    1.3  1  Methyltransf_23  Methyltransferase domain
  ------ inclusion threshold ------
      0.018   14.8   0.0        5.3    6.8   0.0    2.2  2  Methyltransf_31  Methyltransferase domain
      0.093   13.4   0.0        1.1   10.1   0.0    2.3  2  Methyltransf_25  Methyltransferase domain


Domain annotation for each model (and alignments):
>> FtsJ  FtsJ-like methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  181.1   0.0   4.4e-57     2e-53       1     177 []      28     213 ..      28     213 .. 0.98

  Alignments for each domain:
  == domain 1  score: 181.1 bits;  conditional E-value: 4.4e-57
                 CCCCHHHHHHHHHHHHT-S-TT-EEEECT-TTSHHHHHHCCT.T.-SEEEEEESSSSHHHTTEEEECS-CCCSSHHHHHCHCHHH.........SSEEE CS
        FtsJ   1 yrsRsayKLleidekfklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpmaplpgvttiqgditdpetiekikealse.........rkvdl 90 
                 yrsR+ayKLle+++k++++k+g  v+Dlg+aPG+wsqv+l+ +g++g v avD+q+++p++gv  + gd +dp+t+ ki+ea+ +           vd 
  EPX71584.1  28 YRSRAAYKLLELNQKHRFLKKGYGVIDLGFAPGSWSQVALKAVGTEGFVTAVDIQNVSPPQGVFPVYGDMLDPQTQTKILEAFRQhrqepikreLVVDT 126
                 9****************99****************************************************************9988888877666*** PP

                 EEE--S-SS-CHHHHHHHHHCCCCHHHHCCHCCCCECCCEEEECCCHCCCHHHHHHHHHCCEEEEEEEE-SS--CCG-EEEEEEEEC CS
        FtsJ  91 vvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtfvlkifrgeeteallkqlkkfFekvsvvkPkssrsesseeflvcrgf 177
                 v+sD+  +++g++  d++++++L+ +a++la + l+pgg fv+k + g+e  ++ k l ++F++v++ kPk+s +es+e+++vc+g+
  EPX71584.1 127 VLSDMLHSTTGIRIRDHAISMDLCNSAFQLAKTFLRPGGFFVCKYYMGSEEREFQKSLMEVFKRVYIEKPKASIKESREAYFVCLGR 213
                 ************************************************************************************985 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   4.8e-07    0.0022      10     138 ..      33     188 ..      25     198 .. 0.67

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 4.8e-07
  Methyltransf_23  10 sdklerllpk...lraggrvLdiGcGtGillevl.rengf..svtgvDlspeaveiae...............kakkaqkdqfdeqeaaepqgk 82 
                      + kl++l +k   l++g  v+d+G + G++++v+ ++ g+   vt+vD+  +  +  +               +++   + q+ +qe  + +  
       EPX71584.1  33 AYKLLELNQKhrfLKKGYGVIDLGFAPGSWSQVAlKAVGTegFVTAVDIQNVSPP--QgvfpvygdmldpqtqTKILEAFRQH-RQEPIKRELV 123
                      4444445544444667779**************9888898655899999755444..25599998888886654444445555.4444444445 PP

  Methyltransf_23  83 fdlIvlrevlehvp.....dpp.......ellrqiatllkpgGylllseplaslkedrllldwlylvp 138
                       d++ + ++l++       d++       ++++ ++t l+pgG +++ ++    +e+r +++ l++v 
       EPX71584.1 124 VDTVLS-DMLHSTTgirirDHAismdlcnSAFQLAKTFLRPGGFFVCKYYM--GSEEREFQKSLMEVF 188
                      555433.3333333121224447777777*********************4..568999999888875 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.0    0.0012       5.3       2      38 ..      47      83 ..      46      85 .. 0.93
   2 ?    6.1   0.0     0.002       8.8      84     127 ..     136     189 ..     105     209 .. 0.69

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0012
  Methyltransf_31  2 dkglrvlDlGCGtGeltfelaeelgpkaevvGiDise 38
                     +kg+ v+DlG + G  + ++ + +g+++ v+ +Di+ 
       EPX71584.1 47 KKGYGVIDLGFAPGSWSQVALKAVGTEGFVTAVDIQN 83
                     78999*****************************986 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.002
  Methyltransf_31  84 l........naladpdkileeiervlkpggilliedpr..llaelpakveeesk 127
                                 +  ++++++ ++  l+pgg +++ ++    ++e+ +++ e  k
       EPX71584.1 136 TgirirdhaISMDLCNSAFQLAKTFLRPGGFFVCKYYMgsEEREFQKSLMEVFK 189
                      1444455446788999******************99985444444455555554 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00024       1.1       1      31 [.      52      83 ..      52      89 .. 0.92
   2 ?    0.9   0.0      0.18   7.9e+02      77      97 .]     145     165 ..     102     165 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00024
                     EEEET-TTSHHHHHHHCTST.SSEEEEEESSH CS
  Methyltransf_25  1 vLdlGcGtGrltlalakrlg.kakvtgvDise 31
                     v+dlG  +G +++ ++k++g ++ vt+vDi+ 
       EPX71584.1 52 VIDLGFAPGSWSQVALKAVGtEGFVTAVDIQN 83
                     89*****************779*******986 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.18
                      SSHHHHHHHHHHHHHHEEEEE CS
  Methyltransf_25  77 lsdedlekalkeiarvLkpgG 97 
                      +s +    a++ ++  L+pgG
       EPX71584.1 145 ISMDLCNSAFQLAKTFLRPGG 165
                      555556778888888899988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       467  (0.0260472); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.30s 00:00:00.86 Elapsed: 00:00:00.51
# Mc/sec: 1271.59
//
Query:       EPX71585.1  [L=546]
Description: hypothetical protein SOCG_01802 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.49   10.8   2.1        5.7    7.3   0.8    2.4  2  DUF3637   Protein of unknown function (DUF3637)


Domain annotation for each model (and alignments):
>> DUF3637  Protein of unknown function (DUF3637)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.8   0.00032       5.7      10      48 ..      93     132 ..      89     136 .. 0.87
   2 ?    1.8   0.0     0.017     3e+02      15      41 ..     494     520 ..     490     534 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.00032
     DUF3637  10 krkdkshsysp.reielkynsdfafkprplapllrlepsd 48 
                 k   ks s sp + i l  n d +f    l+p+  l ps 
  EPX71585.1  93 KINVKSESASPsKRIHLDLNNDSSFDAPFLTPMNDLSPSR 132
                 55679999999557***********************995 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.017
     DUF3637  15 shsyspreielkynsdfafkprplapl 41 
                 s s spr+ie     d+      la l
  EPX71585.1 494 SQSQSPRQIEESTRNDIEHTKEALARL 520
                 899*******99988888777777754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (546 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1222  (0.0681577); expected 358.6 (0.02)
Passed bias filter:                      333  (0.0185733); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.28s 00:00:00.88 Elapsed: 00:00:00.46
# Mc/sec: 3552.60
//
Query:       EPX71586.1  [L=322]
Description: deoxycytidylate deaminase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.1e-27   94.4   2.5    4.7e-27   93.8   2.5    1.3  1  dCMP_cyt_deam_1  Cytidine and deoxycytidylate deaminase zinc-
    8.2e-12   45.1   0.1    1.5e-11   44.2   0.1    1.4  1  MafB19-deam      MafB19-like deaminase
    0.00057   20.4   0.0     0.0022   18.5   0.0    2.0  1  AAA_18           AAA domain
  ------ inclusion threshold ------
      0.032   14.1   0.1       0.34   10.7   0.0    2.0  2  dNK              Deoxynucleoside kinase
      0.062   13.0   0.0       0.16   11.7   0.0    1.6  2  CoaE             Dephospho-CoA kinase
        1.2    9.0   3.8        3.9    7.4   0.0    3.2  3  RCC1_2           Regulator of chromosome condensation (RCC1) 


Domain annotation for each model (and alignments):
>> dCMP_cyt_deam_1  Cytidine and deoxycytidylate deaminase zinc-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.8   2.5   1.6e-30   4.7e-27       2     100 ..     173     291 ..     172     292 .. 0.96

  Alignments for each domain:
  == domain 1  score: 93.8 bits;  conditional E-value: 1.6e-30
                      HHHHHHHHHHHHHHHHHHTTTSCSEEEEEEETTEEEEEEESBHHCCTG.......................TTB-HHHHHHHHHHHHT.SSCET CS
  dCMP_cyt_deam_1   2 ekdekllelalkaakeaqkcsnfkVGavivkngeiistgyngepaggs.......................ktiHAEvnAilkaakng.gskle 71 
                      ++d++++++a +aa ++ +c++ +VG+v+v++++ii+tgyng+p+g +                        ++HAE nA+l+a++++ g +  
       EPX71586.1 173 SWDSYFMQMASLAAMRS-NCMKRRVGCVLVRDNRIIATGYNGTPRGIKncneggcprcnsalscgtglhtcLCLHAEENALLEAGRERvG-S-- 262
                      79***************.********************************************************************9755.3.. PP

                      TEEEEEEE--BHHHHHHHHHHT-SEEEEE CS
  dCMP_cyt_deam_1  72 gatlyvtlePCsmCakaiiqsgikkvvvg 100
                      + +ly+ ++PC +C+  i+q+gi++vv+ 
       EPX71586.1 263 NGILYCDTCPCLTCSVKIAQVGISEVVYS 291
                      37*************************97 PP

>> MafB19-deam  MafB19-like deaminase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.2   0.1   5.2e-15   1.5e-11       2     104 ..     173     295 ..     172     312 .. 0.92

  Alignments for each domain:
  == domain 1  score: 44.2 bits;  conditional E-value: 5.2e-15
  MafB19-deam   2 dkekafrkalaevekatkikedkigavivkdkkviargsn.......................ekelnakataHaEiaalqqAakklkskrlddatly 76 
                  +++ +f++ ++++  ++++ ++ +g+v v d+++ia+g+n                        + l+     HaE +al  A   + +   ++ +ly
   EPX71586.1 173 SWDSYFMQMASLAAMRSNCMKRRVGCVLVRDNRIIATGYNgtprgikncneggcprcnsalscGTGLHTCLCLHAEENALLEA---GRERVGSNGILY 267
                  5899*********************************************************9999999999**********99...666666799*** PP

  MafB19-deam  77 vtlepCdmCagaivqaglkklvygagnp 104
                   +  pC  C   i+q g+ ++vy +++ 
   EPX71586.1 268 CDTCPCLTCSVKIAQVGISEVVYSMSYS 295
                  ************************9965 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   7.5e-07    0.0022       1     109 [.       4     104 ..       4     108 .. 0.69

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 7.5e-07
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf..gvnlrdvakenglllevdpealdeskrldedkldklldaleenssaleegknlvidghlaeleseaakdikk. 96 
                 ++ltG++++GK tl + L k+l f   +++ +    ++ ++ vd+e     ++      d++ + +++           vi g+++  +    +++ + 
  EPX71586.1   4 VGLTGPICSGKDTLVEFLVKELDFkpIDRVYKADEASDVVYQVDDE----ILVGANALIDYVTQRWRG---------RFVINGIPSTQLLNGIIKRPFf 89 
                 78*******************9888866666666666666666666....555555555555555555.........4577777777777776666666 PP

      AAA_18  97 ..vvLtaspeelleR 109
                   v+++a+  ++++R
  EPX71586.1  90 llVYVDAPVLTRFRR 104
                 777777777777777 PP

>> dNK  Deoxynucleoside kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00011      0.34       3      27 ..       6      30 ..       4      46 .. 0.90
   2 ?    1.1   0.1       0.1     3e+02      62     117 ..      99     154 ..      92     165 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00011
                EEESTTSSHHHHHHHHHCCSTCEEE CS
         dNK  3 veGnIgaGKstlvklLskklgvkvf 27
                + G+I +GK tlv++L k+l++k +
  EPX71586.1  6 LTGPICSGKDTLVEFLVKELDFKPI 30
                57*******************9976 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.1
                 HHHHHHHHCHHSSS-EEEEES-HHHHHHTHHHHHHHTTSS-HHHHHHHHHHHHHHH CS
         dNK  62 lsrlkqqlealatkqvvvleRsiysdryiFakalaekgtlseeelkiykelldnll 117
                 l+r++++++ l+ k++ +   +  +d   F ++++ +++ s  +++i ++  ++ +
  EPX71586.1  99 LTRFRRYTSYLHLKNTTLEQFCAIQDEAAFKSNNSVNRHRSLAQVHINNDAIEKSV 154
                 7899999999999**************9******9999999999999888777655 PP

>> CoaE  Dephospho-CoA kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   5.3e-05      0.16       2      32 ..       3      38 ..       2      56 .. 0.74
   2 ?   -2.2   0.0      0.94   2.8e+03     152     174 ..     126     148 ..      86     152 .. 0.59

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 5.3e-05
                EEEEEESTTSSHHHHHHHHHH.TT-EEEE....HHH CS
        CoaE  2 ivgltGgiasGKstvanlfad.lgvpivD....aDl 32
                +vgltG i sGK t+ + + + l ++ +D    aD 
  EPX71586.1  3 VVGLTGPICSGKDTLVEFLVKeLDFKPIDrvykADE 38
                79************9999887799888883333444 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.94
                 HHHHHS--HHHHHHH-SEEEE-. CS
        CoaE 152 aiiaaQlseeerlaladvvldNd 174
                 a  ++  s + +++la+v ++Nd
  EPX71586.1 126 AAFKSNNSVNRHRSLAQVHINND 148
                 33444555566667777777776 PP

>> RCC1_2  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.0    0.0013       3.9      12      27 ..     198     213 ..     194     217 .. 0.93
   2 ?   -0.0   1.2      0.28   8.4e+02       3      14 ..     232     245 ..     230     268 .. 0.71
   3 ?   -1.3   0.0       0.7   2.1e+03       9      20 ..     298     309 ..     297     310 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0013
      RCC1_2  12 caLtedGeVlcWGsNs 27 
                 c+L++d+++ ++G N+
  EPX71586.1 198 CVLVRDNRIIATGYNG 213
                 **************95 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.28
      RCC1_2   3 svsaG.dyHsca.L 14 
                 ++s+G + H+c  L
  EPX71586.1 232 ALSCGtGLHTCLcL 245
                 57888778888644 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 0.7
      RCC1_2   9 yHscaLtedGeV 20 
                  Hs +++e+G V
  EPX71586.1 298 THSASILEEGGV 309
                 6********977 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       691  (0.0385409); expected 358.6 (0.02)
Passed bias filter:                      452  (0.0252106); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.52u 0.28s 00:00:00.80 Elapsed: 00:00:00.45
# Mc/sec: 2131.62
//
Query:       EPX71587.1  [L=562]
Description: cytoplasmic histidine-tRNA ligase Hrs1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.3e-37  129.7   0.0    6.1e-32  111.1   0.0    2.2  2  tRNA-synt_His    Histidyl-tRNA synthetase
    6.7e-16   58.2   1.4    2.4e-15   56.4   1.4    2.1  1  WHEP-TRS         WHEP-TRS domain
    2.3e-13   50.1   0.0    5.1e-13   49.0   0.0    1.6  1  HGTP_anticodon   Anticodon binding domain
    8.2e-05   22.2   0.0    0.00023   20.7   0.0    1.7  2  HGTP_anticodon2  Anticodon binding domain of tRNAs
  ------ inclusion threshold ------
      0.049   12.7   0.0       0.27   10.3   0.0    2.1  2  tRNA-synt_2      tRNA synthetases class II (D, K and N)


Domain annotation for each model (and alignments):
>> tRNA-synt_His  Histidyl-tRNA synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.1   0.0   1.7e-35   6.1e-32       1     277 [.      93     376 ..      93     382 .. 0.88
   2 !   16.4   0.1   1.2e-06    0.0042     280     310 .]     406     440 ..     400     440 .. 0.84

  Alignments for each domain:
  == domain 1  score: 111.1 bits;  conditional E-value: 1.7e-35
                    T---EETCHHHHHHHHHHHHHHHHHHTT-EEEE--SEEEHHHHCTTSTCCHHHS-EEE-TTSSEEEE-SSSHHHHHHHHHHHHHTSS-EEEEEEEE CS
  tRNA-synt_His   1 glrdllpeeaekieelrrrlldlfeswGYelVspPllEyldslltgagedldqtfklvDqsgrllglRaDiTpqvaRiaahrlnrerplRlcYaGs 96 
                    g++d + +++  +e++ ++++d+f+++G     +P++E  + l  + ged++ ++ l+Dq g+l +lR D+T+  aR  a + +  ++ R++ a +
     EPX71587.1  93 GTKDWYDKDVVLRERIFKTVTDIFKRHGGVTLDTPVFELKEILAGKYGEDSKLIYDLKDQGGELCSLRYDLTVPFARWLAMNPKVTNIKRYHIA-K 187
                    678999999999***********************************************************************99999998765.6 PP

                    EEESS-SS..TT--CCEEEEEEEEESS-SHHH.HHHHHHHHHHHHHHHCTSSSEEEEEEETCHHHHHHHHTT--HHHHHHHHHHHHCT-HHHHH.. CS
  tRNA-synt_His  97 vlrtrpdg..lgrsreplQvGaEliGaeglea.dlEvlslllealeaaagvkelrldlghvglvralleaaglsesleeallaalarkdlaelk.. 187
                    v+r+ +     gr re++Q+   + G+ ++   d E l++l+e+l+ a++v + +++++h ++++ ++  +g+++++ +++ +a+++ d    +  
     EPX71587.1 188 VYRRDQPAmtKGRMREFYQCDFDIAGSFDPMIpDSEALKVLVESLD-ALEVGNYTIKINHRQILDGIFTVCGVPSDKVRTISSAVDKLDKLPWEev 282
                    6655554424579**************865544************7.***********************************99999886555400 PP

                    ..HHHHCCTTHHHCCHCC....HCCHCCCHHHHCHCC..HCTHHHHHHHHHHHHHHHHHHHHHHHH-TTEEE-TT--TTTTT--SEEEEEEETT- CS
  tRNA-synt_His 188 ..elaaeaglkealrellkal.elygdaevleealea..laaapalqaaldeleelaallealakpevrvtlDlaelrgyeYytGlvFaayaegv 277
                      e++ e+gl+e++++ ++ +  l+gd + l++++++  l+++p++++a +++e l ++le+++   +++++D+++ rg++YytG++++a++e +
     EPX71587.1 283 krEMVVEKGLSEDVADKISEYvLLKGDCSLLNKLKSDslLSSNPSATSAFKDMELLFDYLESFG-ILNKFSFDMSLARGLDYYTGIIYEAVTEAS 376
                    02456678999**********999999998888765422778899*****************98.679**********************99865 PP

  == domain 2  score: 16.4 bits;  conditional E-value: 1.2e-06
                    -SEEEEEECTTTGGG.T-...--EEEEEEEEHHHH CS
  tRNA-synt_His 280 aiarGGrYdelgaaf.gr...arpAtGfsldleal 310
                     ia GGrYd+l+++f  +   + p++G sl le++
     EPX71587.1 406 SIAAGGRYDNLVGMFaAKknsQVPCVGISLGLERI 440
                    69*************73334477*********986 PP

>> WHEP-TRS  WHEP-TRS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.4   1.4   6.6e-19   2.4e-15       1      52 [.      34      91 ..      34      92 .. 0.90

  Alignments for each domain:
  == domain 1  score: 56.4 bits;  conditional E-value: 6.6e-19
    WHEP-TRS  1 LnekiaaQGelVRkLKaekapkdeidaaVkkLLaLK......aqykaltGkdykpgsa 52
                +ne+i+aQG++VR+LK+++apk+eid++V+kLLaLK      +   ++++++++ +++
  EPX71587.1 34 INERISAQGNVVRALKSQGAPKNEIDKEVEKLLALKnlkvgeSGSGKKKDNSFTLKTP 91
                79**********************************8888888888888888888775 PP

>> HGTP_anticodon  Anticodon binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.0   0.0   1.4e-16   5.1e-13       2      92 ..     460     557 ..     459     559 .. 0.91

  Alignments for each domain:
  == domain 1  score: 49.0 bits;  conditional E-value: 1.4e-16
                     EEEEESSSS...HHHHHHHHHHHHHHHHTTTSEEEEES.SSSTHHHHHHHHHHTT-SEEEEE-HHHHHHTEEEEEET....TTCEEEEEETTHHH CS
  HGTP_anticodon   2 vvviplnek...aeeleeyakklaeeLraagirveldd.snesigkkireadllgipfavvvGekelekgtvtvrdr....dtreqervsldelv 88 
                     v+v++++ +   +  ++++++++++eL+++gi++e+ +  + ++++++  ad+  +pf +++G++e+++++v +r++    +++e + vs++++v
      EPX71587.1 460 VFVMAFGGGkewTG-FLKERMQICDELWKNGIKAEFLYkAKPKPRQQFDAADKYAVPFSIILGQDEIDQNSVRIRKMglkeKSDEGQLVSRADMV 553
                     78888888777555.889********************9**************************************8887777889******** PP

                     HHHH CS
  HGTP_anticodon  89 eklk 92 
                     ++l+
      EPX71587.1 554 KVLQ 557
                     *998 PP

>> HGTP_anticodon2  Anticodon binding domain of tRNAs
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.75   2.7e+03      87     131 ..     352     397 ..     347     415 .. 0.53
   2 !   20.7   0.0   6.5e-08   0.00023       6      89 ..     458     542 ..     454     559 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.75
  HGTP_anticodon2  87 dvdldldelvswlkqeirere.kereesaksskssaessqkedeas 131
                       +d++l+  ++++   i e   + +  + kss+++++s+++e++ s
       EPX71587.1 352 SFDMSLARGLDYYTGIIYEAVtEASAPKVKSSTEKKSSEDPEADRS 397
                      5677777777777777777662233333333333333333333332 PP

  == domain 2  score: 20.7 bits;  conditional E-value: 6.5e-08
  HGTP_anticodon2   6 cDVlVasfd.....ksiLrtsgvellqeLWahnIsAdlaldasksleelvskarddgvswiviikqqnkskskekplkvkslekkedvd 89 
                      +DV+V+ f        +L ++++++  eLW+++I+A++ ++a+  + +  + a++  v + +i  q++    ++++++++++  ke  d
       EPX71587.1 458 VDVFVMAFGggkewTGFL-KERMQICDELWKNGIKAEFLYKAKPKPRQQFDAADKYAVPFSIILGQDE---IDQNSVRIRKMGLKEKSD 542
                      666776665222223466.899********************************************65...55568******9888655 PP

>> tRNA-synt_2  tRNA synthetases class II (D, K and N)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   7.6e-05      0.27      22     122 ..     102     211 ..      92     255 .. 0.79
   2 ?   -0.9   0.0      0.19   6.8e+02     276     298 ..     422     444 ..     412     458 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 7.6e-05
                  HHHHHHHHHHHHHHHHHTT-EE----SEESS-..-SSSS--EEEEETTT.T.......EEE-E-S-SHHHHHHHHHCTHSEEEEEEEEE--S--B.TT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xx RF
  tRNA-synt_2  22 lrlrstvtkavrkyleengfieietPiLsksd..teegarlFkvksrekek.......effaLtqspqlylellivagidrvfqiaraFRaEdsr.td 109
                  + lr+++ k v ++++++g +  +tP++  ++   ++ +++ k+    k++       ++  Lt+    +l +       + + ia+++R  +   t+
   EPX71587.1 102 VVLRERIFKTVTDIFKRHGGVTLDTPVFELKEilAGKYGEDSKLIYDLKDQggelcslRY-DLTVPFARWLAMNPKVTNIKRYHIAKVYRRDQPAmTK 198
                  568999999999999999999999998665543355556666666666633454454333.5888888888888777778889******999876367 PP

                  B-S-CEEEEEEEE CS
                  xxxxxxxxxxxxx RF
  tRNA-synt_2 110 rhlaEFtqieaem 122
                    + EF+q+++ +
   EPX71587.1 199 GRMREFYQCDFDI 211
                  7899******987 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.19
                  HHHCT--SEEEEEEEHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2 276 aleyGapphgGlglGldRlvmll 298
                  a + + +p  G+ lGl+R+  +l
   EPX71587.1 422 AKKNSQVPCVGISLGLERIFSIL 444
                  5566789999********99887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (562 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       372  (0.0207485); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.45
# Mc/sec: 3732.92
//
Query:       EPX71588.1  [L=463]
Description: N-myristoyltransferase 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-81  273.4   0.0    1.7e-81  272.7   0.0    1.3  1  NMT_C     Myristoyl-CoA:protein N-myristoyltransferase, C-ter
    2.9e-73  245.0   0.1    5.1e-73  244.2   0.1    1.4  1  NMT       Myristoyl-CoA:protein N-myristoyltransferase, N-ter


Domain annotation for each model (and alignments):
>> NMT_C  Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  272.7   0.0   1.9e-85   1.7e-81       1     208 [.     242     460 ..     242     461 .. 0.92

  Alignments for each domain:
  == domain 1  score: 272.7 bits;  conditional E-value: 1.9e-85
                 HTTSS--BTTS-HHHHHHHH---SS-SSTTEEE--CCCHHHHHHHHHHHHTTSSEEEE--HHHHHHHHC-SSTTSBTTTEEEEEEEETTS.EEEEEEEE CS
       NMT_C   1 evgFsalprnstlarlvklyklpeetktkglremeekDveavtellekylkrfdlaqvfseeeveHwllskkkkreeqvvwsYVvedeetkkitDfvSF 99 
                 e+gF++lp +s+ a+ +++y+lp+et+t+glr+me++Dv++v++ll++yl+rf+la+ f+e ev+Hw+l +++ ++  v+wsYV ed++tkkitDf+SF
  EPX71588.1 242 EIGFAPLPFGSSPAKEMAKYHLPSETATPGLRPMEKRDVSQVQNLLSRYLERFELAHFFTEVEVQHWFLGDSEVSKGPVIWSYVAEDPKTKKITDFFSF 340
                 79************************************************************************************************* PP

                 EE--EEETT-SS-SEEEEEEEEEEE......ECCC.....TTHHHHHHHHHHHHHHHHHHCTESEEEEESSTTGGGCTTTTT-EEEEEEEEEEEETEEE CS
       NMT_C 100 YslpstvlknpkhktlkaAYlfyya......stet.....kklkkrlkeLvkdalilakkakfDvfnaltlmdnklfleelkFgagdgkLnYYLyNyrv 187
                 Yslps+vl+np+++ +kaAYl+yya      +  +     ++  +r+k L+kd li+a++ +fDvfna+t+mdn+lfl++l+Fg+gdg+LnYY+yNyr+
  EPX71588.1 341 YSLPSSVLGNPQYNDIKAAYLYYYAsesypkD--DskaslDTFVERCKLLIKDSLIIANRLRFDVFNAVTVMDNNLFLKDLRFGEGDGYLNYYIYNYRC 437
                 *************************5555541..03333455556****************************************************** PP

                 .-..-SB-CCGSB.TT....BEX CS
       NMT_C 188 apiaggvkeekeleekkg..vGv 208
                 +++ gg+++e++ ++++   +G+
  EPX71588.1 438 PKVPGGIDSENNIDKSRPsgMGF 460
                 **********9888444323665 PP

>> NMT  Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  244.2   0.1   5.7e-77   5.1e-73       1     160 []      68     228 ..      68     228 .. 0.98

  Alignments for each domain:
  == domain 1  score: 244.2 bits;  conditional E-value: 5.7e-77
                 ESS----GGGS-SS----STTEEEEE--TTSHHHHHHHHHHHHHHSSCTTTSTEEE---HHHHHHHCTSTT--GGGEEEEEETTTTEEEEEEEEEEEEE CS
         NMT   1 pieeskkveevrkeplklpkgfewvtvdledeeelkevyelLsenYvedddamfrfkyskeflkWalkppgykkewhvgvrvkkskkLvafisaipvkl 99 
                 pi++s+++e+v+kep++l k+few+t++led++el+evyelL+enYved++am+rf+ys+efl+Wal+ pgy k+whvgvrvk+skkLvafisa+p+ +
  EPX71588.1  68 PIDPSTDIEKVPKEPYRLLKEFEWTTMNLEDDNELREVYELLTENYVEDSSAMLRFAYSAEFLRWALMCPGYVKDWHVGVRVKASKKLVAFISAVPLVI 166
                 6999*********************************************************************************************** PP

                 EETTEEEE.EEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHTTT--EEEEEESSTSSSESEEE CS
         NMT 100 rvrkkvlk.lveinfLcvhkklRskrlapvlikEitRrvnlkgifqavytagvvlpkpvstC 160
                 r+r+k ++ ++e+nfLc+hkklR+krl+p+likE+tRr++l +++qavyt+g++lp+pvs C
  EPX71588.1 167 RLRDKLFEkCSEVNFLCIHKKLRNKRLTPLLIKEVTRRCHLLNVWQAVYTGGILLPSPVSVC 228
                 ***888776***************************************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (463 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       460  (0.0256568); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 3272.34
//
Query:       EPX71589.1  [L=248]
Description: hypothetical protein SOCG_01806 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
      0.086   12.3   0.0       0.12   11.8   0.0    1.1  1  Nodulin-like  Nodulin-like


Domain annotation for each model (and alignments):
>> Nodulin-like  Nodulin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   6.8e-06      0.12     188     240 ..      10      62 ..       3      66 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 6.8e-06
  Nodulin-like 188 pkkkeersesavFlvllvisvllavyllvvsilskvvslssaalaalaailvl 240
                   ++++ e+++ ++F ++  +++ + v +l ++i+ + ++  ++++ ++ a+l+ 
    EPX71589.1  10 AEAEMEQEDLRIFRFMIGLAISVPVLILCLIIIRRYIDCKHKKYRIFRAVLCC 62 
                   5667789999****************************************664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       542  (0.0302304); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.28s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 1654.84
//
Query:       EPX71590.1  [L=232]
Description: meiosis specific cyclin Crs1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-10   40.9   0.2    3.3e-10   39.8   0.2    1.6  2  Cyclin_N  Cyclin, N-terminal domain


Domain annotation for each model (and alignments):
>> Cyclin_N  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.21   3.7e+03      82      90 ..       1       9 [.       1      15 [. 0.81
   2 !   39.8   0.2   1.8e-14   3.3e-10      31     127 .]      88     184 ..      59     184 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.21
                HHHHHHHSS CS
    Cyclin_N 82 llAaKveei 90
                +lA+K+e +
  EPX71590.1  1 MLASKYETC 9 
                69****875 PP

  == domain 2  score: 39.8 bits;  conditional E-value: 1.8e-14
                 HHHHHHHHHHHHHHTT--TTHHHHHHHHHHHHHHHS.---CCCHHHHHHHHHHHHHHHHSSS---HHHHHHHTTTSS-HHHHHHHHHHHHHHTTT--- CS
    Cyclin_N  31 RailidwlvevaekfkltpetlflavnyldRflskk.svpkdklqlvgatcLllAaKveeisppkledlvyitdeafteeeilemErliLetLnfdls 127
                 R +l + l e a  f ++ +tl++a+++ldR +s+k s+p + ++  ++++L++A+K+  ++++  + ++     + + +e+ + E+ +L+ L +d++
  EPX71590.1  88 RWQLFTVLYEEAIDF-VSMDTLCIAISLLDRCYSRKpSIPSKAFKIYAIGSLFVACKLTSDYTVAKKSFCKQLAPSLSIRELEKYEKIVLSLLSYDIY 184
                 555666666655555.5889**************776**********************************************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       491  (0.0273858); expected 358.6 (0.02)
Passed bias filter:                      348  (0.0194099); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 1625.91
//
Query:       EPX71591.1  [L=912]
Description: C-1-tetrahydrofolate synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   5.5e-225  747.8   0.1   2.5e-201  669.7   0.0    2.3  2  FTHFS            Formate--tetrahydrofolate ligase
    1.3e-67  226.0   1.8    2.5e-67  225.2   1.8    1.5  1  THF_DHG_CYH_C    Tetrahydrofolate dehydrogenase/cyclohydrolas
    8.9e-37  125.9   0.2      4e-36  123.8   0.2    2.1  2  THF_DHG_CYH      Tetrahydrofolate dehydrogenase/cyclohydrolas
     0.0082   15.1   0.1      0.017   14.1   0.1    1.4  1  OCD_Mu_crystall  Ornithine cyclodeaminase/mu-crystallin famil
  ------ inclusion threshold ------
      0.047   13.0   0.1        0.1   11.8   0.1    1.6  1  AlaDh_PNT_C      Alanine dehydrogenase/PNT, C-terminal domain


Domain annotation for each model (and alignments):
>> FTHFS  Formate--tetrahydrofolate ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.3   0.3     1e-25   3.7e-22       2      72 ..     318     387 ..     317     388 .. 0.97
   2 !  669.7   0.0    7e-205  2.5e-201     105     553 ..     386     911 ..     386     912 .] 0.98

  Alignments for each domain:
  == domain 1  score: 78.3 bits;  conditional E-value: 1e-25
                 -HHHHHHCS----HHHHHHCTT--CCCEEEBSTTEEEE-CHHCCTCTTTS-.-EEEEEEESS--TT--SHH CS
       FTHFS   2 sdieiaqeaklkpieeiaeklglkeeelelyGkykakvslkvlerllkekkkgklilvtaitPtplGeGKt 72 
                 sdieia++++lk+i+++a+++g++e+e+e+yG+ykakv+++++erl k++k+g++i+v++itPtp+GeGK+
  EPX71591.1 318 SDIEIAKSQELKKITTVAKEMGIHETEIETYGHYKAKVDMTLYERL-KHRKDGHYIVVSGITPTPFGEGKS 387
                 8******************************************876.9**********************8 PP

  == domain 2  score: 669.7 bits;  conditional E-value: 7e-205
                 T--SCEETTEEEESHHHHHTTTTSHHHHHHHHHHHHHHHHHHHHHTTTT.................................................. CS
       FTHFS 105 KGgAaGGGysqvvPmedinLhltGDihaitaannllaalidnrifhene.................................................. 153
                 K gAaGGGy+q vPm+d+nLh+tGDiha+taannll a++++r+fhe++                                                  
  EPX71591.1 386 KSGAAGGGYAQFVPMDDFNLHMTGDIHAVTAANNLLVAALETRMFHESTqtdstlirrlipvkdgrrvvpkglltrwkkicsnlkqdpnqlenvsqevl 484
                 78************************************************************************************************* PP

                 .....T-EECCCE---EEESS--GGGSSEEES-SSTTS---EEE-EEEGGGSHHHHHHHH-SSHHHHHHHHHC-EEEEETTS-EEECCCCT-HHHHHHH CS
       FTHFS 154 .....ldidpkkitwkrvlDvndraLRkivvglggkekgvpretgfditvasEimailaLakdledlkerlgrivvaytkdgepvtaedlkvagalavl 247
                      l+idp++it +rvlDvndr+LR+i +gl+++ekg +r+t+fdi+vasE+m+ilaL++dl+d+++rl+++v+a++++g+pvta dl+vaga+avl
  EPX71591.1 485 ekfvrLNIDPETITSNRVLDVNDRFLRSIELGLASTEKGRSRKTSFDISVASECMSILALSNDLKDMRTRLANMVIANDTNGDPVTAGDLGVAGAMAVL 583
                 *************************************************************************************************** PP

                 TTTTTS-EEEEETT--EEEE-----SSSS--B--HHHHHHHHHH...........-SEEEEEBSSSTTTHHHHHHHTHHHHHT---SEEEEEEEHHHHH CS
       FTHFS 248 lkdaikPnlvqtlegtpalvHggPFAniahGcnsviatklalkl...........adyvvtEaGFgadlgaekfldikcrasglkpdavvlvatvraLk 335
                 lkdaikPnl+qtlegtpalvH+gPFAni++G++s ia+k++lkl           a+yvvtEaGF++d+g+ekf++ikcr+sglkp+av+lv+tv+aLk
  EPX71591.1 584 LKDAIKPNLMQTLEGTPALVHAGPFANISIGASSTIADKVGLKLvgtesfesadsAGYVVTEAGFASDMGMEKFFNIKCRSSGLKPSAVILVTTVKALK 682
                 *************************************************************************************************** PP

                 HHTT.....--C...CCTTS--HHHHHHHHHHHHHHHHHHCTTT--EEEEEE--TT--HHHHHHHHHHH.HCTTSEEEEE-HHHHGGGGGHHHHHHHHH CS
       FTHFS 336 lhgg.....vek...eelkeenlealekGlanlekhienvkkfgvpvvvainkfktDteaelelvkela.eakavevalsevwakGgeGalelaeavve 425
                 lhgg     +++   +e+  enl++++kG+an+ +hi+n +kf+vpvvvain+fktDt +e+e+++++a +a+a++++ s +++kGg+Gal+lae+v++
  EPX71591.1 683 LHGGgpelkPGAplpDEYLVENLDLVRKGCANMVHHIQNSQKFNVPVVVAINSFKTDTIKEYETIRQEAlNAGAIDAVPSYQYSKGGQGALNLAESVMK 781
                 ****87766222667*****************************************************99***************************** PP

                 HCC..--.---SS-TTS-HHHHHHHHHHHTT--SEEEE-HHHHHHHHHHHHTTCTTS-EEEE--SSSSSSSTT--SS--S-EEEEEEEEEETTTTEEEE CS
       FTHFS 426 ale..ekefkflYdlelsieekietiakeiYgadgvelseeakkklkklekqgldklpvciaKtqySlsddpklkgapegftltvrevrlsaGagfiva 522
                 a++  +k+f+flYd ++sieeki+ iake+Yga+gve+s+ a++++ +l++qg+++lp+c+aKtqySls+dpkl+++p++f +++r++rl+aGagfi++
  EPX71591.1 782 ACSfpKKDFRFLYDVKSSIEEKITVIAKEMYGAKGVEFSPLAERRMMDLKRQGYEHLPICMAKTQYSLSHDPKLLNVPNDFVVPIRDMRLNAGAGFIYP 880
                 ***96699******************************************************************************************* PP

                 ESST--SS----SS-GGGC-EE-TTSEEES- CS
       FTHFS 523 lageimtmPGlpkkpaaekidvdeegkieGl 553
                 l+++i+t+PGlp+ pa+ +id++e+g+i+Gl
  EPX71591.1 881 LTAKIQTIPGLPTAPAYLNIDLTEDGEIVGL 911
                 ******************************9 PP

>> THF_DHG_CYH_C  Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  225.2   1.8     7e-71   2.5e-67       3     158 ..     135     295 ..     133     297 .. 0.97

  Alignments for each domain:
  == domain 1  score: 225.2 bits;  conditional E-value: 7e-71
                    HHHHHHHTT..--SS--HHHHHHHHHHHHCT---TT-EEEEE---TTTHHHHHHHHHCTT-EEEEE-TTSCCHHHHHCCSSEEEE-SS-TT-B-GG CS
  THF_DHG_CYH_C   3 lnlgrlvkg..eeallpctpkgvvellketgielegkkvvvvGrsnivgkplallLleknatVtvchsktkdlaeitreadivvvavGkpelikae 96 
                    +n+g l+k+  ++  +pctp+gv+ell+e++i ++gk++v++Grs+ivg+p++ lL ++natVtvchs+t++++e + +adi+v+a+Gkpe++++e
     EPX71591.1 135 VNIGMLAKNsaTPIHVPCTPMGVMELLHEYNIPIAGKHAVILGRSDIVGNPVSYLLRQENATVTVCHSHTENIQEQIARADILVAALGKPEFVRGE 230
                    8********877899********************************************************************************* PP

                    GS-TT-EEEE---EEC...-TTEEE-SB-HHHHCTTSSEE--TTTSCHHHHHHHHHHHHHHHHHC CS
  THF_DHG_CYH_C  97 mvkegavviDvGinrv...ekgklvGDvdfeevkevasaitPvpgGVGpmTvamllkntleaakr 158
                    ++k+gavv+DvGin +   +k++lvGDv++ +v++vas+itPvpgGVGpmTvaml++nt++aa+ 
     EPX71591.1 231 WLKPGAVVVDVGINAIhrnGKRELVGDVHYPSVSQVASHITPVPGGVGPMTVAMLMRNTVKAAEI 295
                    ****************9877788***************************************985 PP

>> THF_DHG_CYH  Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.8   0.2   1.1e-39     4e-36       8     116 .]      20     130 ..      18     130 .. 0.96
   2 ?   -3.3   0.0         3   1.1e+04      30      59 ..     626     655 ..     617     669 .. 0.76

  Alignments for each domain:
  == domain 1  score: 123.8 bits;  conditional E-value: 1.1e-39
                  HHHHHHHHHHHHHHHHHH..T---EEEEEEES--HHHHHHHHHHHHHHHHTT-EEEEEEE-TT--HHHHHHHHHHHHH-TT--EEEE-SS-STTS-HH CS
  THF_DHG_CYH   8 akeireelkeeveklkek..gvkpkLavilvgddpasevYvrnkkkaceevGieseliklpedvseeellklieelneddsvdGilvqlPlpkhidek 103
                  +++++++++eeve+lk+   + +p+La+++vg++++s+vYvr+k++a++++Gi++++ ++pe++s+++ll+++++ln+d+sv+GilvqlPlp+h++e+
   EPX71591.1  20 HSKLQKSVAEEVERLKRTdgNYRPSLAIVQVGKREDSNVYVRMKERAAKRIGITYKHCAFPETISQSTLLHEVRKLNNDQSVHGILVQLPLPHHLNER 117
                  678999**********965678**************************************************************************** PP

                  HHHCCS-GGGBTT CS
  THF_DHG_CYH 104 aileaispeKDVD 116
                   i+e+i  eKDVD
   EPX71591.1 118 TITESILAEKDVD 130
                  ************9 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 3
                  EEEEEEES--HHHHHHHHHHHHHHHHTT-E CS
  THF_DHG_CYH  30 kLavilvgddpasevYvrnkkkaceevGie 59 
                  kL++    ++++s+ Yv   +  ++++G+e
   EPX71591.1 626 KLVGTESFESADSAGYVVTEAGFASDMGME 655
                  566666667889999999999999999987 PP

>> OCD_Mu_crystall  Ornithine cyclodeaminase/mu-crystallin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.1   4.7e-06     0.017     177     236 ..     193     258 ..     178     294 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 4.7e-06
                      .CTT-EEECSC....HHHHTTSSEEEE----SS-SB-GGGS-TT-EEEE-S--...STT--SB-HHH CS
  OCD_Mu_crystall 177 fefevsackse....eeavegadivvtvTaakapilkaewvkpGahinavgad...apgkteLdddi 236
                       +  v++c+s     +e +++adi+v++   k   +  ew+kpGa +  vg +   ++gk+eL  d+
       EPX71591.1 193 ENATVTVCHSHteniQEQIARADILVAAL-GKPEFVRGEWLKPGAVVVDVGINaihRNGKRELVGDV 258
                      467788888762222677899*****985.5667999***********9997622256788887776 PP

>> AlaDh_PNT_C  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   2.9e-05       0.1      72     130 ..     194     244 ..     179     313 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.9e-05
                  TCECEEHCHHHHHHHHHHHH-SEEEE---BTTSS---SC-HHHHHTS-TTEEEEETTGG CS
  AlaDh_PNT_C  72 akfvevlksqeellaeavkeadvvigtvlipGkkaPkLvteemvksMkpgsVivDvAid 130
                  + +v+v +s+ e+++e++++ad+++ +        P  v+ e    +kpg+V+vDv i+
   EPX71591.1 194 NATVTVCHSHTENIQEQIARADILVAAL-----GKPEFVRGEW---LKPGAVVVDVGIN 244
                  445999******************9983.....4699999987...58********886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (912 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       516  (0.0287802); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.82u 0.33s 00:00:01.14 Elapsed: 00:00:00.57
# Mc/sec: 4785.28
//
Query:       EPX71592.1  [L=234]
Description: ribosomal protein subunit L51-b [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.4e-21   75.3   0.2    7.4e-20   71.8   0.2    2.1  2  Mit_ribos_Mrp51  Mitochondrial ribosomal protein subunit


Domain annotation for each model (and alignments):
>> Mit_ribos_Mrp51  Mitochondrial ribosomal protein subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.8   0.2   4.1e-24   7.4e-20       4     112 ..       3     103 ..       1     159 [. 0.88
   2 !    1.6   0.0    0.0094   1.7e+02     304     325 ..     178     199 ..     170     222 .. 0.68

  Alignments for each domain:
  == domain 1  score: 71.8 bits;  conditional E-value: 4.1e-24
  Mit_ribos_Mrp51   4 laaLLRnSRLfslpkplpppalsasdtatlpyPthqaItTpksslargdWGLKrslPlksttskvsspvirvnalDtiehitdfesaadhtltl 97 
                      + +L+RnSR + l++ +p+    + + +++ +P  qa t +ks + rgdWG Kr++P        s+++i v+  Dt eh  +f+ +   + tl
       EPX71592.1   3 FINLFRNSRAVTLARIIPE--DLTIKPENACFPSLQALTAKKSQRTRGDWGVKRKFP------VFSTRHISVDRFDTPEHQCSFSASDRFVRTL 88 
                      679****************..5555566666**************************......589**************************** PP

  Mit_ribos_Mrp51  98 kkfqElgiplkssek 112
                      k+ q+l++p+++++ 
       EPX71592.1  89 KRLQDLNLPVTKRKV 103
                      **********43333 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.0094
  Mit_ribos_Mrp51 304 eskaklgvGGfvandpssstsa 325
                      +++   gv+G+++++ s+++ +
       EPX71592.1 178 SRELMFGVAGIITSTGSTRDPR 199
                      467778******9887765443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (234 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       335  (0.0186848); expected 358.6 (0.02)
Passed bias filter:                      289  (0.0161191); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.44
# Mc/sec: 1615.24
//
Query:       EPX71593.1  [L=683]
Description: AP-2 adaptor complex subunit Apl1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   1.2e-105  354.1   8.3   1.4e-105  353.8   8.3    1.0  1  Adaptin_N  Adaptin N terminal region
    4.7e-39  134.0   3.9    1.1e-38  132.9   0.1    3.0  3  Cnd1       non-SMC mitotic condensation complex subunit 1
    2.8e-08   33.3   1.6       0.42   11.0   0.0    5.1  5  HEAT       HEAT repeat
    5.3e-08   33.2   0.0    0.00019   21.8   0.0    3.8  3  HEAT_2     HEAT repeats
    7.9e-05   22.5   4.3      0.013   15.3   0.2    3.4  3  RIX1       rRNA processing/ribosome biogenesis
     0.0034   16.9   0.2      0.011   15.2   0.1    1.9  2  Arm_2      Armadillo-like
     0.0039   16.4   3.3        3.4    6.7   0.0    3.7  4  MMS19_C    RNAPII transcription regulator C-terminal
  ------ inclusion threshold ------
       0.11   12.7   2.1       0.42   10.8   0.2    3.0  3  RTP1_C1    Required for nuclear transport of RNA pol II C-ter
       0.13   12.2   2.1       0.27   11.1   0.3    2.4  3  DUF3361    Domain of unknown function (DUF3361)


Domain annotation for each model (and alignments):
>> Adaptin_N  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  353.8   8.3  7.1e-109  1.4e-105       7     522 ..      20     538 ..      14     540 .. 0.96

  Alignments for each domain:
  == domain 1  score: 353.8 bits;  conditional E-value: 7.1e-109
                 HHHHHHCCSSS.-SCHHHHHHHHHHHHHHHCT---GHHHHHHHCCCCSS-CHHHHHHHHHHHHHCTTSCCHHCCCCHHHHHHCCSSSHHHHHHHHHHHC CS
   Adaptin_N   7 qelaeilnsnk.dddekkkeavkkliylialGedvsflffevvklvaskdfelKrlvYlylellaeesedlalLvtnslqkDlkdpnqlirglALrvLs 104
                 +el++il   + d++ kk++a+kk+i+ +  G+++  lf++vv ++ ++++ lK+l+Yl+l+ +a  ++ +a+ ++  + k ++++n+++r + L++L+
  EPX71593.1  20 SELRAILRADSkDKPAKKINAMKKIIANMSMGYNMIPLFPAVVSCMETSNVDLKKLCYLFLKSFASINPSEATKAIPVVLKGVQSSNPVLRDFSLKTLT 118
                 5777777666679************************************************************************************** PP

                 CC--CCCHHHHHHHHHHHHT-SSHHHHHHHHHHHHHCCCCCHHCCCCC.HHHHHHHCTT-SSHHHHHHHHHHHHHHHCCCCCCC.HHHHHHHCCHHHHH CS
   Adaptin_N 105 sirvpelaedlapaikkllkdrspyvrkkAalailklykkdpdllrkq.lveeikellsdkdpgvvlaAvalleeikkndrlll.kllpklvrrLcnll 201
                 si  ++   + ++ +++ll d +pyvrk+A++ +++ly+ d+++++   l+  ike l+d++ +vv++A+a+l +i ++ + ++ +l ++ ++r+ ++l
  EPX71593.1 119 SIHIKNFWIASLDPVTRLLDDVDPYVRKTAIMGVARLYSYDKKIVESSgLIRSIKEMLNDESSLVVTNALAVLISIVQSSDVFKlTLTKEVTTRIIECL 217
                 ****************************************************************************777777778************** PP

                 HCS-HHHHHHHHHHHCC---SSHHHH..HHHHHHHCGGCGCSSCHHHHHHHHHCCHCCCCST.......HHHCCHHCHHHHHHSSCCTCHHHHHCHHHH CS
   Adaptin_N 202 teldpwlqvkiiklltrlarqepeerskkellesllnllqssnnaVlletvnlivelapkne.......livlavnaLvrllsskdenlryvaLrtllk 293
                 +++++wlq++i++ l  +++q+p e+  +++ e++ ++lq+ n+aV + t+++  ++ +  +        + ++v  Lv+ll  k  +++yv+Lr+   
  EPX71593.1 218 NDCSEWLQTIILDSLIYYVPQKPGEA--ESFAERISPWLQHGNTAVCMGTIKATLYYINYMNdesiiqdHLRKVVPPLVTLLARKSSATQYVVLRNVEI 314
                 **************************..78**********************98744444334568889889*************************** PP

                 HHHHXXTTTTTTTCCCCSXXTTSXHHHHHHHHHHHCCCXXTTTHHHHHHHHHHHTTSSXXHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHTTXXHH CS
   Adaptin_N 294 ivkkepkavqhldlkifllktdddvsirlkaldlllklvdesNvkeivkeLkkyvkevadedfksklvkaIgrlaekfatdaewvldvllellslsges 392
                 i+    +++++  l +f++  dd+  ++l++  +l+kl++e+N+++i+ e+++y++e+ d ++ +k v+ Ig+la+k+++ a+ +++ l+el+ ++ ++
  EPX71593.1 315 ILNAY-PEIFQSSLHFFFCHFDDPAIVKLEKFSILSKLANEENLDQILPEFMEYASEI-DVELSRKSVRYIGHLAVKIESRADECVNCLVELINTKISY 411
                 *****.*************************************************999.**************************************** PP

                 HHHHHHHHHHHHHHHSTTTSTTCHHHHCCTCCGXXSHHHHHHHHHHHHHTTTTXTT...HHHHHHCTTTTTTTSXHHHHHHHHHHHHHHHHCXGCC.TH CS
   Adaptin_N 393 vkdeivevirdliqkvpelheeiiekLaellekieseearaaaiWllGeygelvsntesasdllrslaekfvlesekvklqiltalvKlyltspdketq 491
                 v +e++ vird+++k+p+  ++ i+ L++ +e  +++ea+aa iWllG y+e +++      ll      f  e+ +++l+ilta++Kl+l  p    +
  EPX71593.1 412 VIQEAAIVIRDILRKYPTRYKYLISILLKNMEFFDEPEAKAAFIWLLGHYAESIED---SRMLLGEYVDGFLYEPLELQLTILTAATKLFLKMPA--AG 505
                 *******************************************************9...999********************************5..56 PP

                 XHHHHHHHHHHH..XXSHHHHHHHHHHHHHHCC CS
   Adaptin_N 492 ekliqlvlslat..ssdlevrdRaveylqllss 522
                 +++++ vl+l+t   +d ++rdR ++y+++ls+
  EPX71593.1 506 SEMVTKVLQLCTeeIQDPDLRDRGIIYSRMLST 538
                 6999999999998966*************9986 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       1.2   2.5e+03     122     160 ..      60      98 ..      20     106 .. 0.55
   2 !  132.9   0.1   5.3e-42   1.1e-38       2     162 .]     109     271 ..     108     271 .. 0.98
   3 ?    0.7   0.2      0.24   4.7e+02      93     146 ..     357     410 ..     335     443 .. 0.50

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 1.2
        Cnd1 122 fLlsyipkdkqeaeslveklcprlqhansavvlaaikvi 160
                 +++s+++ ++ + ++l+    + +   n+++  +ai v+
  EPX71593.1  60 AVVSCMETSNVDLKKLCYLFLKSFASINPSEATKAIPVV 98 
                 333333333334444444444444444444444444444 PP

  == domain 2  score: 132.9 bits;  conditional E-value: 5.3e-42
        Cnd1   2 iRalairtlgcirvpnlveylvepLrkrLkDedpyVRktaaivvakL..ilndmvkekgflselaklleDenprVvanalaalteiseksenaiynllp 98 
                 +R   ++tl++i+++n+  + ++p+++ L D dpyVRkta+++va+L  +++++v+++g++  ++++l+De++ Vv+nala+l  i + s+   ++l++
  EPX71593.1 109 LRDFSLKTLTSIHIKNFWIASLDPVTRLLDDVDPYVRKTAIMGVARLysYDKKIVESSGLIRSIKEMLNDESSLVVTNALAVLISIVQSSDVFKLTLTK 207
                 688899*****************************************999999************************************99999***** PP

        Cnd1  99 diisklsdalnecsewgqitilefLlsyipkdkqeaeslveklcprlqhansavvlaaikviLs 162
                 ++  ++ ++ln+csew q+ il++L+ y+p++  eaes +e++ p lqh n+av + +ik+ L+
  EPX71593.1 208 EVTTRIIECLNDCSEWLQTIILDSLIYYVPQKPGEAESFAERISPWLQHGNTAVCMGTIKATLY 271
                 ************************************************************9986 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.24
        Cnd1  93 iynllpdiisklsdalnecsewgqitilefLlsyipkdkqeaeslveklcprlq 146
                 + ++lp+ + + s+   e+s+++ ++i  + ++  ++ ++  + lve +  +++
  EPX71593.1 357 LDQILPEFMEYASEIDVELSRKSVRYIGHLAVKIESRADECVNCLVELINTKIS 410
                 555555555555555555555555555554444444444444444444433333 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.0   0.0    0.0041       8.2       2      27 ..      95     120 ..      94     121 .. 0.94
   2 !   11.0   0.0   0.00021      0.42       3      29 ..     131     157 ..     130     158 .. 0.89
   3 !    9.7   0.1   0.00055       1.1       1      29 [.     168     196 ..     168     198 .. 0.90
   4 ?   -0.7   0.0       1.2   2.4e+03       5      14 ..     213     222 ..     211     231 .. 0.85
   5 ?   -4.3   0.0         9   1.8e+04      20      28 ..     397     405 ..     397     407 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0041
                 HHHHHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgal 27 
                 +P++lk  ++++p  R+ ++k+L+ +
  EPX71593.1  95 IPVVLKGVQSSNPVLRDFSLKTLTSI 120
                 79*********************977 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00021
                 HHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   3 PlllkllsDpspeVReaAakaLgalae 29 
                 +++ +ll D +p VR++A+  +++l++
  EPX71593.1 131 DPVTRLLDDVDPYVRKTAIMGVARLYS 157
                 678899***************999986 PP

  == domain 3  score: 9.7 bits;  conditional E-value: 0.00055
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalae 29 
                 l+  + ++l+D+s+ V  +A+  L  +++
  EPX71593.1 168 LIRSIKEMLNDESSLVVTNALAVLISIVQ 196
                 577899******************99997 PP

  == domain 4  score: -0.7 bits;  conditional E-value: 1.2
                 HHHHHT-SSH CS
        HEAT   5 llkllsDpsp 14 
                 ++++l+D+s 
  EPX71593.1 213 IIECLNDCSE 222
                 8999***875 PP

  == domain 5  score: -4.3 bits;  conditional E-value: 9
                 HHHHHHHHH CS
        HEAT  20 AakaLgala 28 
                 ++++L++l+
  EPX71593.1 397 CVNCLVELI 405
                 688998875 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.0   9.3e-08   0.00019       2      84 ..      96     189 ..      95     193 .. 0.84
   2 ?    0.2   0.0       0.5   9.9e+02      33      73 ..     247     299 ..     210     308 .. 0.60
   3 !    5.8   0.0    0.0092        18      12      67 ..     371     434 ..     361     459 .. 0.67

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 9.3e-08
      HEAT_2   2 daLlqalendpdpevrraairaLgrignp....ealpaLvellededpavRraaaeaLgai........gdpealpaLkellddddddvvReaAa 84 
                 ++ l+ + ++++p +r   +++L +i+ +     +l+ +++ll+d dp+vR++a++  +++         ++  +++ ke+l+d+++ vv +a a
  EPX71593.1  96 PVVLKGV-QSSNPVLRDFSLKTLTSIHIKnfwiASLDPVTRLLDDVDPYVRKTAIMGVARLysydkkivESSGLIRSIKEMLNDESSLVVTNALA 189
                 6778888.899*************99988778888************************884443333347889********9999999988744 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.5
      HEAT_2  33 lpaLvellededpavRraaaeaL..........gaigd..pealpaLkelldd 73 
                  + + ++l++ ++av +  ++a           + i+d   +++p L  ll++
  EPX71593.1 247 AERISPWLQHGNTAVCMGTIKATlyyinymndeSIIQDhlRKVVPPLVTLLAR 299
                 66777888888999998888876333333322223332335566666666655 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.0092
      HEAT_2  12 pdpevrraairaLg......rignpealpaLvellededpavRraaaeaLgai..gdpealpaL 67 
                  d e+ r+ +r +g      + + +e++++Lvel++++ ++v ++aa  +  i  + p  ++ L
  EPX71593.1 371 IDVELSRKSVRYIGhlavkiESRADECVNCLVELINTKISYVIQEAAIVIRDIlrKYPTRYKYL 434
                 56677788888888776755555669*********99999999999888776643334443333 PP

>> RIX1  rRNA processing/ribosome biogenesis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.2   6.3e-06     0.013      50     173 ..     133     250 ..      81     255 .. 0.77
   2 ?    4.4   0.1     0.014        28     129     168 ..     282     325 ..     280     328 .. 0.90
   3 ?    2.4   0.0     0.055   1.1e+02     135     166 ..     396     431 ..     390     438 .. 0.87

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 6.3e-06
        RIX1  50 ilsLlqskspegrwaGvcLakvtveesgeellssgstWlrallsiLekpdppavlelaistlsriftltrgkptltREiltpnlpkfitallqlleeel 148
                 ++ Ll + +p+ r +++  +  + +  ++  + ++s ++r++  +L+ +++ +v++++  ++s + +    k tlt+E++t  +  +++ + + l   +
  EPX71593.1 133 VTRLLDDVDPYVRKTAIMGVARLYS--YDKKIVESSGLIRSIKEMLNDESSLVVTNALAVLISIVQSSDVFKLTLTKEVTTR-IIECLNDCSEWL---Q 225
                 6788888888999888876666655..5556667788************999999999999999999**************9.444444444444...5 PP

        RIX1 149 etvlealstllplhPttfRpfanki 173
                   +l++l   +p+ P    +fa++i
  EPX71593.1 226 TIILDSLIYYVPQKPGEAESFAERI 250
                 8888888888888887777777776 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.014
        RIX1 129 ltpnlpkfitallqlleee....letvlealstllplhPttfRp 168
                  + +l k++++l++ll  +    +  vl+    +l ++P +f++
  EPX71593.1 282 IQDHLRKVVPPLVTLLARKssatQYVVLRNVEIILNAYPEIFQS 325
                 567899***********88***999****************987 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.055
        RIX1 135 kfitallqlleee....letvlealstllplhPttf 166
                  ++++l++l++ +    ++++  +++++l+++Pt  
  EPX71593.1 396 ECVNCLVELINTKisyvIQEAAIVIRDILRKYPTRY 431
                 678999999998899999***************975 PP

>> Arm_2  Armadillo-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.1   5.8e-06     0.011      24      79 ..     139     192 ..     128     219 .. 0.85
   2 ?   -3.8   0.0       3.4   6.8e+03     161     195 ..     536     572 ..     535     576 .. 0.63

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 5.8e-06
       Arm_2  24 sedpliqeialltlgnsaaysvnqdiirdlggitiianllsksnaevkekalnaln 79 
                   dp++ + a  ++g++  ys  ++i+++ g i  i ++l++++  v  +al +l 
  EPX71593.1 139 DVDPYVRKTA--IMGVARLYSYDKKIVESSGLIRSIKEMLNDESSLVVTNALAVLI 192
                 5688888876..79**************************************9985 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 3.4
       Arm_2 161 lseNpamtrellsakvlss.l.lslfnkkeakeillr 195
                 ls Np+ +++++ ++++   +    ++ +++ + ll+
  EPX71593.1 536 LSTNPDLAKKVILTNAPPVdVeADAYDPETSEQLLLN 572
                 8999999999998877642121235666665555555 PP

>> MMS19_C  RNAPII transcription regulator C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0      0.07   1.4e+02     370     401 ..      89     120 ..      54     127 .. 0.87
   2 !    6.3   0.1    0.0022       4.5      10      96 ..     179     254 ..     168     265 .. 0.79
   3 !    6.7   0.0    0.0017       3.4     365     414 ..     279     328 ..     271     331 .. 0.93
   4 ?   -2.4   0.0      0.94   1.9e+03     258     289 ..     487     517 ..     485     527 .. 0.81

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.07
     MMS19_C 370 peLptLlPlLlqaLdlpdaevkastLetlksi 401
                 +e ++ +P++l++ + +++ ++  +L+tl+si
  EPX71593.1  89 SEATKAIPVVLKGVQSSNPVLRDFSLKTLTSI 120
                 5667779**********************987 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0022
     MMS19_C  10 saseasasayervLeaLaelssekqlfetlvi.rllnkldlvlksnessaayahailstllkllekkqtdlekeellnsyydrivprl 96 
                 +   +s   + ++L++L ++ + +++f+ ++   +++++ ++l++ +  +  + +il++l++ + +k        +++s+++ri p+l
  EPX71593.1 179 E---SSLV-VTNALAVLISIVQSSDVFKLTLTkEVTTRIIECLNDCS--EWLQTIILDSLIYYVPQKP------GEAESFAERISPWL 254
                 2...2222.899****************9998667777766666665..68888************99......45699999999887 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.0017
     MMS19_C 365 kslllpeLptLlPlLlqaLdlpdaevkastLetlksileespslvsehls 414
                 +s++  +L +++P L++ L+ ++++ ++ +L  +++il+  p+++++ l+
  EPX71593.1 279 ESIIQDHLRKVVPPLVTLLARKSSATQYVVLRNVEIILNAYPEIFQSSLH 328
                 68999**********************************99***999765 PP

  == domain 4  score: -2.4 bits;  conditional E-value: 0.94
     MMS19_C 258 aleiliwitKALvlRghplatelldkLlelLs 289
                 +l+il+  tK L l+  ++++e+++k+l+l  
  EPX71593.1 487 QLTILTAATK-LFLKMPAAGSEMVTKVLQLCT 517
                 6778888888.999999***********9987 PP

>> RTP1_C1  Required for nuclear transport of RNA pol II C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.2   0.00021      0.42       6      71 ..     135     198 ..     130     236 .. 0.88
   2 ?   -2.6   0.0         3   5.9e+03      60      77 ..     397     414 ..     388     443 .. 0.68
   3 ?   -1.2   0.0       1.1   2.2e+03      35      53 ..     506     524 ..     490     525 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00021
     RTP1_C1   6 kdlqdpllpvrahglvlLrkliekkskeavldiekilkllleaLkdedsYvYLnaikgLvaLadvf 71 
                 + l d  + vr  +++  ++l +  +  ++++ + +++ ++e+L+de s v  na  +L ++++  
  EPX71593.1 135 RLLDDVDPYVRKTAIMGVARLYSYDK--KIVESSGLIRSIKEMLNDESSLVVTNALAVLISIVQSS 198
                 678999****************9998..9*******************************999873 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 3
     RTP1_C1  60 aikgLvaLadvfpeevlk 77 
                 ++++Lv+L+++  + v++
  EPX71593.1 397 CVNCLVELINTKISYVIQ 414
                 566666666555444443 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 1.1
     RTP1_C1  35 vldiekilkllleaLkded 53 
                  + ++k+l+l+ e ++d+d
  EPX71593.1 506 SEMVTKVLQLCTEEIQDPD 524
                 5678999*********998 PP

>> DUF3361  Domain of unknown function (DUF3361)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       1.4   2.8e+03      18      61 ..      44      86 ..      38     100 .. 0.73
   2 ?   11.1   0.3   0.00014      0.27      55     115 ..     169     226 ..     160     241 .. 0.82
   3 ?   -2.1   0.0       1.6   3.3e+03      42      65 ..     385     408 ..     349     432 .. 0.63

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 1.4
     DUF3361 18 iveegkesgeilayaLtafleLmdhgivsWdtlsdeFikkiasi 61
                i+ +    g ++  +  a ++ m+  +v  ++l   F+k  asi
  EPX71593.1 44 IIANM-SMGYNMIPLFPAVVSCMETSNVDLKKLCYLFLKSFASI 86
                55554.34667777778899999999999999999999988876 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.00014
     DUF3361  55 ikkiasivnksaadasilqrslaiLesivlnsselyelvekevtlesLiehLqssnqeiqt 115
                 i+ i +++n +   + ++ ++la+L siv++s+    +++kevt+ ++ie L++ ++ +qt
  EPX71593.1 169 IRSIKEMLNDE--SSLVVTNALAVLISIVQSSDVFKLTLTKEVTT-RIIECLNDCSEWLQT 226
                 66777777777..7899****************999999999985.677777777666665 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 1.6
     DUF3361  42 hgivsWdtlsdeFikkiasivnks 65 
                 h  v+ ++  de+++  ++ +n++
  EPX71593.1 385 HLAVKIESRADECVNCLVELINTK 408
                 444555555555566666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (683 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       461  (0.0257125); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.61u 0.27s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 4799.87
//
Query:       EPX71594.1  [L=197]
Description: 60S ribosomal protein L13/L16 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-10   41.7   0.0    1.2e-08   35.2   0.0    2.4  1  Ribosomal_L13  Ribosomal protein L13


Domain annotation for each model (and alignments):
>> Ribosomal_L13  Ribosomal protein L13
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.2   0.0   6.7e-13   1.2e-08       3     123 ..       8     117 ..       6     119 .. 0.84

  Alignments for each domain:
  == domain 1  score: 35.2 bits;  conditional E-value: 6.7e-13
                    EEEEETTSBHHHHHHHHHHHHHTTTSTT--TTS--S-EEEEEEGGCBB-SSTHHTT-EEEEE-SSTTSEEEEEHHHHHCCSHHHHHHHHHHCCS-S CS
  Ribosomal_L13   3 yviDAegqvlgrlaskiakvLrGkhkptytphvdcGdyvvvinaekvaltgkkleqkvyyrhtgypgglkevtakellekkpeeilekaVkgmLpk 98 
                    +viDA+g+ +grlas +ak L              G  vvv+ +e+++++g+  ++k  y    +     + t   ++ + p++i++kaV+gmLp+
     EPX71594.1   8 VVIDAKGHLMGRLASVVAKQLL------------SGQKVVVVRCEELNISGSFFRNKLKYLAYLRKTCRYNPTRGAFHFRAPSRIFQKAVRGMLPH 91 
                    6899999999999999999876............5778*************888888777666666666777778899*****************8 PP

                    SH.HHHHHGCTEEEESSSTTSGGGGS CS
  Ribosomal_L13  99 nk.lgrrrlkrLkvyageehpheaqk 123
                    ++  g++ l++L+  +g   p ++qk
     EPX71594.1  92 KSpRGQAALEHLQAVEGVPPPFDKQK 117
                    763778888*******9999988887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       853  (0.0475766); expected 358.6 (0.02)
Passed bias filter:                      570  (0.0317921); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.47
# Mc/sec: 1256.17
//
Query:       EPX71595.1  [L=163]
Description: YjgF family protein Mmf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.6e-40  136.1   0.0    7.2e-40  135.8   0.0    1.1  1  Ribonuc_L-PSP  Endoribonuclease L-PSP


Domain annotation for each model (and alignments):
>> Ribonuc_L-PSP  Endoribonuclease L-PSP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.8   0.0     4e-44   7.2e-40       5     120 ..      48     162 ..      44     163 .] 0.97

  Alignments for each domain:
  == domain 1  score: 135.8 bits;  conditional E-value: 4e-44
                    TTTSSS-BSEEEETTEEEEEEE-SB-TTTSCB.-SSHHHHHHHHHHHHHHHHHHTT--GGGEEEEEEEESSGGGHHHHHHHHHHHSSSSTS--EEE CS
  Ribonuc_L-PSP   5 paaaapYsqavkagnlvyvsGqlpldpetgelvegdveeqtrqalenlkavLaaagaslsdvVkvtvFladiedfaevnevyaeafdelkeaPars 100
                    +++a+pY+qa+ka++++y+sGq+p++  +g++veg v  qtrq+l nl+ vL++ag+ l+++Vk+++Fl d++dfa+vn++y e ++++k  Pars
     EPX71595.1  48 LSSAGPYNQAIKANGTIYCSGQIPVK--DGKVVEGCVGTQTRQCLLNLQDVLQEAGSGLDKIVKINIFLSDMNDFATVNKAYSETLPDPK--PARS 139
                    6799*********************8..7************************************************************8..**** PP

                    EEE-SBSG...GG-SEEEEEEEE CS
  Ribonuc_L-PSP 101 aveVaaLp...kgakvEIeaiav 120
                    +v+V++Lp   +g+k+EIe+iav
     EPX71595.1 140 CVAVKTLPleaQGVKIEIECIAV 162
                    ********9999**********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       440  (0.0245412); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.31s 00:00:00.82 Elapsed: 00:00:00.51
# Mc/sec: 969.43
//
Query:       EPX71596.1  [L=102]
Description: translocon beta subunit Sbh1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.3e-17   61.1   1.0    9.4e-17   60.8   1.0    1.2  1  Sec61_beta  Sec61beta family


Domain annotation for each model (and alignments):
>> Sec61_beta  Sec61beta family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.8   1.0   5.3e-21   9.4e-17       2      41 .]      54      93 ..      53      93 .. 0.95

  Alignments for each domain:
  == domain 1  score: 60.8 bits;  conditional E-value: 5.3e-21
                XXXXXXXXX----SS-B-THHHHHHHHHHHHHHHHHTSS- CS
  Sec61_beta  2 saGLlryyeedapgikidPkvVlvlsvafiasVilLhila 41
                  +Ll+ y+++a+g+k+dP+vV+vlsv+fiasV++Lhi+a
  EPX71596.1 54 TPTLLKLYSDEATGFKVDPVVVMVLSVGFIASVFALHIVA 93
                568***********************************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       592  (0.0330191); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.32s 00:00:00.79 Elapsed: 00:00:00.49
# Mc/sec: 628.92
//
Query:       EPX71597.1  [L=1074]
Description: inositol-polyphosphate 5-phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.8e-77  259.1   0.1    9.5e-77  258.4   0.1    1.3  1  Syja_N           SacI homology domain
    3.4e-13   49.7   0.1    5.3e-13   49.0   0.1    1.3  1  Exo_endo_phos    Endonuclease/Exonuclease/phosphatase family


Domain annotation for each model (and alignments):
>> Syja_N  SacI homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  258.4   0.1   1.1e-80   9.5e-77       1     317 [.      60     374 ..      60     377 .. 0.84

  Alignments for each domain:
  == domain 1  score: 258.4 bits;  conditional E-value: 1.1e-80
      Syja_N   1 ygilGlirllsgsyllvitkreevgtlkgkkeiykitevellplsseeeaekalkslkakt....ekkkeeke....leekllkll...eklfessgsf 88 
                 yg lGli+l+++++l+vit+++ev+++++++ i++itev ++++++++ ++ +++ ++ +t    +    + e    +++++ ++     + + ++g+f
  EPX71597.1  60 YGTLGLIELENSNFLCVITGASEVARIREGERIFRITEVCFYSVNRPTWDHIRQEGNSLDTgdgyD----S-EapgyDASRYTSEPfgsLRKLLTNGTF 153
                 799*****************************************8775555544444333333331....2.13556555555554333345558**** PP

      Syja_N  89 YFsydlDltrslqrqlekssesskslplweraderFvWNrhllkpli.........ea...eldswllpviqGfveqsklklsksqkekekkevtltli 175
                 YFs d+D+t++lq + +++ ++ +s     ++ e+F+WN+++l++l          e+   ++  + + vi+Gf +++ +kl         ++v+l li
  EPX71597.1 154 YFSLDFDITSRLQLRTSHAYTDLQSD----TMHEQFMWNEFMLRQLFkfrshlnshEKdvmDACCFYTCVIRGFSGTEPFKLGM-------QNVRLSLI 241
                 *************9998764444444....78999**********655666665542256667777778******999998765.......579***** PP

      Syja_N 176 sRrsrkraGtRylrRGiddeGnvANfvEtEqilevessekeskilSfvqiRGSiPlfWsqeptlkykpkirierseeenleafkkHfekllkrYgkvvv 274
                 sR s++raGtR+l+RG+dd+GnvAN+vEtE+il +      ++ +Sfvq+RGSiP+fW+qe+ + + +ki i+rs e++++af+kHf++++k+Yg+v++
  EPX71597.1 242 SRLSSYRAGTRFLARGVDDDGNVANYVETETILDT-----PNYSVSFVQVRGSIPIFWEQEGVQMFGQKIDITRSFEATRAAFEKHFSDIIKEYGPVHI 335
                 **********************************4.....4588******************8888********************************* PP

      Syja_N 275 vnLlekkgrEkkLgeayekavkklnklekekkklkyveFDfhk 317
                 vnLl + + E+ L+++++++++++     ek+ ++++eFD+h+
  EPX71597.1 336 VNLLGTGSGERSLSDRLRQHIQYSP----EKELIHLTEFDYHS 374
                 ************************8....589**********7 PP

>> Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.0   0.1   5.9e-17   5.3e-13       1     233 []     563     839 ..     563     839 .. 0.79

  Alignments for each domain:
  == domain 1  score: 49.0 bits;  conditional E-value: 5.9e-17
                    EEEEESTGCHHHHTHHHHHHHHHHHHHHCTT.....SEEEEEEEBSCTCHHHHHHHHHTTCEEEEECCH........................... CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........................... RF
  Exo_endo_phos   1 ltwNvngqaspalgssrrsdrladlltayda.....DvlgLQEvdddelsriplllalggflgasstsp........................... 64 
                    +++N+ng+  p       + +l ++l   d      +v+g+QE       ++ l+    ++ +a+  ++                           
     EPX71597.1 563 ASYNLNGC-LP-------TSDLEKWLFPDDNpmadiYVVGFQE-------IVQLTP--QQVINADPAKRrewetcvkqllnskakygtnyvqlrsg 641
                    69*****9.56.......555*****55522466889******.......999999..66666666666666666666677777777777777999 PP

                    ............................ECSSSTTSSEEEEEECSTE..EEEEEEEEEETSSSSGCEEEEEEEEEEEEEEE.........CCCHHG CS
                    ............................xxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxx RF
  Exo_endo_phos  65 ............................tgggggggnggavlsrfpl..tslfrrtfiefndlvaalrreplaakleqlni.........ashrdh 121
                                                tg gg  gn+gav++rf +  t +                            +         ++++d+
     EPX71597.1 642 qlvgtamivfvkesclpsiknvegtlkkTGLGGVSGNKGAVAIRFDFedTGI----------------------------CfitshlaagHTNYDE 709
                    99*********************************************55444............................1223455654455555 PP

                    HHHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-SSSTSGGGBSCGHHHHHHCTTTHHSSCESCETTTTTTTTTTTEB-B.................. CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.................. RF
  Exo_endo_phos 122 dlvrdlqllalllqvealnadrgapvivaGDfNarpsdddsrvlrtrglalapapvglyllgggptptyvtraggsrl.................. 199
                    +  + +  +  l++    + ++++ v+++GDfN+                                          r+                  
     EPX71597.1 710 RNHDYQTIANGLRFKRGRSIFNHDYVVWFGDFNY------------------------------------------RIsltyedtlycieqgklqn 763
                    5555555555555555566666666666******..........................................99999999999999999999 PP

                    ....................................................EEEEEECHHHCCEEEEEEECCHHEECTSSCSSSB CS
                    ....................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos 200 ....................................................DrilaspalalfrsgvlppplalvrrealtlSDH 233
                                                                        Dril++++l+           +++ + +l++SDH
     EPX71597.1 764 lfendqlnnqmltgevfpffselpitflptykfdigtdiydtsdkhrvpawtDRILYRGELKQ----------TAYNSAPLYFSDH 839
                    9*********************************************************73332..........2222348889999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1074 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       690  (0.0384851); expected 358.6 (0.02)
Passed bias filter:                      509  (0.0283898); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.87u 0.28s 00:00:01.14 Elapsed: 00:00:00.49
# Mc/sec: 6615.87
//
Query:       EPX71598.1  [L=511]
Description: pantothenate transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.9e-35  120.6  24.1    1.1e-34  119.9  24.0    1.3  2  MFS_1            Major Facilitator Superfamily
  ------ inclusion threshold ------
        4.4    7.7  12.5       0.22   11.9   0.7    3.7  4  Phage_holin_5_2  Phage holin family Hol44, in holin superfami


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.9  24.0   1.2e-38   1.1e-34       2     348 ..      35     400 ..      34     404 .. 0.80
   2 ?   -4.2   0.0      0.68   6.1e+03     157     164 ..     427     434 ..     420     456 .. 0.50

  Alignments for each domain:
  == domain 1  score: 119.9 bits;  conditional E-value: 1.2e-38
       MFS_1   2 llaaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfa.sslwlllvlrvlqGlga 99 
                 ++++f+++l+rs ++ a+ + ++edl + + e++ + ++++ g++++++p+++ ++++ +r ++ ++  +++++ ++l+f+ +s+  +++lr+++++++
  EPX71598.1  35 CVSYFINYLDRSSINNAYLSGMKEDLKMYGNELQDINVVFTCGYIIGQIPGSYAMQKMPARYWFAVMNSIWGIM-TILSFTvHSVSSMMALRFFMAVAE 132
                 679***************99**************************************9999************.999997699889************ PP

       MFS_1 100 galfpagaaliadwfpkeergraigllsagfslGailgpllggllasslg.......Wravfyilaivsllafvlfllllpeepperkrkspkeee... 188
                 ++ f++ ++++ +w++ +e  +  +++s++  +G++++  l  ++ ssl        Wr++f++ +++++ ++  +++l+p+ p + k +  +e e   
  EPX71598.1 133 ASTFAGTHYILGAWYKSSEIYKRAAIFSISGLIGSMFAGYLQTAVHSSLDgvcgmagWRWLFIVDGLLTIPLAFYGYFLFPDVPETTKAPYFTEYEkql 231
                 *******************************************88888888888888**********************************99998885 PP

       MFS_1 189 ......kgtgpaplvp.awkallkdpvlw..illialllfffgfsg........lltllplylqevlglsglllaglllallalvgailallagrlsdr 270
                       + ++++p+++  +  ++++  ++  ++l+ + +      +        + +++ +    ++  s  + ++  + ++ +vg+++ + a+ lsdr
  EPX71598.1 232 avkrlpALPKKKPITKqSLLTIFRSWRIYglSILWLFSGE-----TqaiavnvlMGQWMKV--SGDFSVS-QINNY--PTVITAVGVVSTMGASILSDR 320
                 5554444444444444433334444433343333333333.....0223323346666666..6666666.67777..99999999999999******* PP

       MFS_1 271 lgrrrrlllallllllaalgl.allavtssavllllvlvliGfglgfvfpsllalasdla..ppeeagtasglfntagslg 348
                 l+ ++r+ ++l+l+++++++  +lla++  + l  ++++l G++++  ++ ++++a+d +    +e+g ++ ++n+++++ 
  EPX71598.1 321 LSGHTRWPFGLFLFSVTVVSSsILLAWSVPYGLKFFAYFLSGCTYAG-QAVWFSWANDICrdNDQERGIIVFIMNMVQNIW 400
                 *9999999999999887776514555556677777788887765554.4555555555553333*************9985 PP

  == domain 2  score: -4.2 bits;  conditional E-value: 0.68
       MFS_1 157 laivslla 164
                 ++++++++
  EPX71598.1 427 VGGLTFFC 434
                 22222222 PP

>> Phage_holin_5_2  Phage holin family Hol44, in holin superfamily V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.4       0.3   2.7e+03      30      62 ..      76     110 ..      70     127 .. 0.59
   2 ?   11.9   0.7   2.5e-05      0.22       6      67 ..     141     207 ..     137     212 .. 0.76
   3 ?    2.4   0.2     0.023     2e+02       6      41 ..     279     317 ..     274     348 .. 0.63
   4 ?   -2.3   0.0      0.64   5.7e+03      23      40 ..     422     440 ..     413     450 .. 0.50

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.3
  Phage_holin_5_2  30 iGiilgvv.ivfta.dfqaedilifgaiiqGilsg 62 
                      +G i+g + + +++ +++a  ++   + i Gi++ 
       EPX71598.1  76 CGYIIGQIpGSYAMqKMPARYWFAVMNSIWGIMTI 110
                      45444443134445566666665555555666554 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 2.5e-05
  Phage_holin_5_2   6 yiiGeilKktekvkdkyIPlilgiiGiilgvvivfta.dfqaedilifg....aiiqGilsggastg 67 
                      yi+G ++K +e  k   I  i g+iG +++    ++  +  +  + ++g     i+ G+l+  ++ +
       EPX71598.1 141 YILGAWYKSSEIYKRAAIFSISGLIGSMFAGYLQTAVhSSLDGVCGMAGwrwlFIVDGLLTIPLAFY 207
                      ****************************994444443566677777766666677777776666655 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.023
  Phage_holin_5_2   6 yiiGeilKktekvkd...kyIPlilgiiGiilgvvivft 41 
                       ++G ++K +  ++    +  P++++++G++ ++ + ++
       EPX71598.1 279 VLMGQWMKVSGDFSVsqiNNYPTVITAVGVVSTMGASIL 317
                      678888888866555446555999999999888444444 PP

  == domain 4  score: -2.3 bits;  conditional E-value: 0.64
  Phage_holin_5_2  23 IPlil.giiGiilgvvivf 40 
                      I li+ g +  +++ ++ f
       EPX71598.1 422 IALIVvGGLTFFCSCIVSF 440
                      4444313444444433333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (511 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1127  (0.0628591); expected 358.6 (0.02)
Passed bias filter:                      597  (0.033298); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.30s 00:00:00.98 Elapsed: 00:00:00.49
# Mc/sec: 3149.09
//
Query:       EPX71599.1  [L=99]
Description: hypothetical protein SOCG_01816 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00015   21.8   0.1    0.00026   21.0   0.1    1.6  1  DUF727    Protein of unknown function (DUF727)


Domain annotation for each model (and alignments):
>> DUF727  Protein of unknown function (DUF727)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.1   1.5e-08   0.00026      33     105 .]      30      97 ..       7      97 .. 0.73

  Alignments for each domain:
  == domain 1  score: 21.0 bits;  conditional E-value: 1.5e-08
      DUF727  33 ylnvetlEgeelcvelsakGfrvvsskydeveeeeekedeekyfetlyaLLdkiSpeyrekFgekllekLekl 105
                 yl+v t E+ e ++     G  v ++++     e e+ + +k f t ++ L ++Sp++++ F+++l+++L+ l
  EPX71599.1  30 YLKVVTNEQVEATLAWEN-GEWVWEEQQG----EGEEVELKKRFPTCESALLTMSPSFQRWFHNQLASRLSSL 97 
                 566666666655554433.3223333333....3356667899***************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       770  (0.0429472); expected 358.6 (0.02)
Passed bias filter:                      471  (0.0262703); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.44
# Mc/sec: 671.05
//
Query:       EPX71600.1  [L=112]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-19   70.2   1.7    1.8e-19   69.6   1.7    1.3  1  IGR       IGR protein motif
  ------ inclusion threshold ------
       0.17   11.7   0.0       0.19   11.5   0.0    1.1  1  RB_A      Retinoblastoma-associated protein A domain


Domain annotation for each model (and alignments):
>> IGR  IGR protein motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.6   1.7     2e-23   1.8e-19       2      55 .]      39      93 ..      38      93 .. 0.97

  Alignments for each domain:
  == domain 1  score: 69.6 bits;  conditional E-value: 2e-23
         IGR  2 tFLkkIGRnceeha.ekfeswekLfelsskqlkelGipvrqRRYiLrwrekyrqG 55
                +F+++IGRn+e+++  k+++we+Lf+ s++++ke G++vr+R+Yi ++r+++ qG
  EPX71600.1 39 KFFQRIGRNTEQKIdGKIKTWEELFTKSTRDMKEDGLDVRTRKYIANQRNRFIQG 93
                7*************88************************************998 PP

>> RB_A  Retinoblastoma-associated protein A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   2.2e-05      0.19      25      65 ..      34      74 ..      18      96 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 2.2e-05
        RB_A 25 sekLlelfksctedpteeiekrvkelsekflkkyaesseee 65
                 ++L+++f+++ ++  ++i+ ++k+ +e f k++++ +e+ 
  EPX71600.1 34 ITDLRKFFQRIGRNTEQKIDGKIKTWEELFTKSTRDMKEDG 74
                578***************************99666655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       468  (0.026103); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.28s 00:00:00.70 Elapsed: 00:00:00.44
# Mc/sec: 771.74
//
Query:       EPX71601.1  [L=262]
Description: autophagy associated protein Atg5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.5e-46  156.8   0.0    8.4e-46  156.4   0.0    1.1  1  APG5      Autophagy protein Apg5


Domain annotation for each model (and alignments):
>> APG5  Autophagy protein Apg5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.4   0.0   4.7e-50   8.4e-46       1     227 [.      71     257 ..      71     258 .. 0.92

  Alignments for each domain:
  == domain 1  score: 156.4 bits;  conditional E-value: 4.7e-50
        APG5   1 WhlPiGvlyDlltaseeesksaasseaiseknlPwrLtlhfkeypenellpldageeslkdsfinslKeAdfirngsakkvmnLskedqeqLWqsvknh 99 
                 Wh+P+GvlyDll+++++es++        +  + w+L+ h+ ++p++ ++p+  + e+++++f+n+lKe+d++rngs+  v  Lsk ++++ W+s++nh
  EPX71601.1  71 WHWPVGVLYDLLSQEDPESAT--------SVPVLWHLVFHVGSFPSSLVVPMG-SMETFRTCFFNALKESDYVRNGSSSLVIALSKPETDTYWNSLLNH 160
                 *************99998753........34567*******************.********************************************* PP

        APG5 100 dldkfwsinskllpspekkkvreiPiriylpdankdqtesekviqelvpplkedgqpqtLgdllsellpelfpskkkkekasssekeegsaaelakvli 198
                 d+ ++  i+ kl+ s+     r iP++iyl + +       +++q+  +        +tLg++l+++lp lfps                  +l k+++
  EPX71601.1 161 DFYDYRPIATKLFTSK----SRIIPLKIYLGADA-------PIVQSSASL------GYTLGQVLHKQLPRLFPSAVMY--------------SLLKPVL 228
                 *************985....59********6655.......799999994......59***************55543..............578**** PP

        APG5 199 qGievpleaplawlaanlsypDgFlhivv 227
                 +Gi++p   +   + + ++ypDgFlhiv+
  EPX71601.1 229 HGIVLPSTVSTDIMNRDFCYPDGFLHIVL 257
                 ****************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (262 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       347  (0.0193541); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1904.36
//
Query:       EPX71602.1  [L=621]
Description: U1 snRNP-associated protein Usp105 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.9e-09   35.8   1.6     0.0005   20.7   0.2    5.0  5  TPR_14    Tetratricopeptide repeat
     0.0011   18.2   6.7     0.0036   16.5   0.0    4.5  5  NRDE-2    NRDE-2, necessary for RNA interference
     0.0014   18.7   4.9     0.0056   16.7   0.6    2.6  2  Suf       Suppressor of forked protein (Suf)
  ------ inclusion threshold ------
      0.078   13.5   0.1       0.31   11.6   0.1    2.0  1  TPR_19    Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0     0.035   1.6e+02      24      43 ..      17      36 ..      15      37 .. 0.90
   2 ?    1.0   0.0      0.24   1.1e+03       4      41 ..      75     112 ..      60     114 .. 0.80
   3 ?   -2.5   0.0         3   1.3e+04       4      18 ..     147     161 ..     146     171 .. 0.79
   4 ?    4.8   0.0     0.014        62       4      43 ..     285     324 ..     283     325 .. 0.94
   5 !   20.7   0.2   1.1e-07    0.0005       2      43 ..     354     395 ..     353     396 .. 0.93

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.035
      TPR_14 24 lrralalaPddaeawlllaq 43
                l+r + ++Pdd ++w +l +
  EPX71602.1 17 LNRQVTKNPDDFDVWEALIR 36
                789999***********987 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.24
      TPR_14   4 llalaeallalGdpdeAiallrralalaPddaeawlll 41 
                 ++++a++++    p++++++++r +a  P + ++w  +
  EPX71602.1  75 WKKYADFEFFVAGPEASEKVYERGIAGIPYSVDLWANY 112
                 5566666655555899999****999888888888765 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 3
      TPR_14   4 llalaeallalGdpd 18 
                 + ++ e++++++++d
  EPX71602.1 147 WDKYIEFEERQERTD 161
                 889999999999987 PP

  == domain 4  score: 4.8 bits;  conditional E-value: 0.014
      TPR_14   4 llalaeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 +++++++++  Gd+ +   l++++l ++   +e+w++ a+
  EPX71602.1 285 WRKYLDFEEIEGDFSRIYYLYEKCLVACAFYDEFWFRFAR 324
                 899**************************99999999886 PP

  == domain 5  score: 20.7 bits;  conditional E-value: 1.1e-07
      TPR_14   2 eallalaeallalGdpdeAiallrralalaPddaeawlllaq 43 
                   +l++a +++ lG+ + A+a+++++l + P+++ea l +a 
  EPX71602.1 354 GIRLQYALFEESLGNIASARAIYQAILTQLPGNLEAALGWAN 395
                 5689*********************************99985 PP

>> NRDE-2  NRDE-2, necessary for RNA interference
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   7.9e-07    0.0036       4     118 ..      15     120 ..      12     135 .. 0.78
   2 ?   -2.6   0.0      0.51   2.3e+03     102     117 ..     144     159 ..     134     187 .. 0.72
   3 ?    0.5   0.6     0.058   2.6e+02     102     133 ..     282     310 ..     241     381 .. 0.70
   4 ?   -0.5   0.1      0.12   5.4e+02      70     119 ..     430     480 ..     425     519 .. 0.72
   5 ?   -1.6   0.0      0.25   1.1e+03      72     123 ..     494     547 ..     477     551 .. 0.67

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 7.9e-07
      NRDE-2   4 aelnraveenPedidaWlelvefQdellsaeeeslskserkalaeiklsilekAleknksnpdserLllelLklgsei....wdseklakeWeellken 98 
                  +lnr+v +nP+d d W +l++  +++       + ++ +k++ +   s++++ l k         Ll ++ k ++++      +e+ +k +e+ +   
  EPX71602.1  15 DKLNRQVTKNPDDFDVWEALIRATETIEG----GIDRNSSKQTINTLRSVYDRFLTKF-------PLLFGYWKKYADFeffvAGPEASEKVYERGIAGI 102
                 589**********************8874....3445556677777779999999999.......5999999999886333356778889999999999 PP

      NRDE-2  99 pnsvkLWreyldfrqsnfas 118
                 p sv+LW +y +f+++  ++
  EPX71602.1 103 PYSVDLWANYCSFKME--TN 120
                 9999999999999998..34 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.51
      NRDE-2 102 vkLWreyldfrqsnfa 117
                    W +y++f+ ++  
  EPX71602.1 144 HPFWDKYIEFEERQER 159
                 5679999999876533 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.058
      NRDE-2 102 vkLWreyldfrqsnfasfsvekvkelyekclr 133
                 +  Wr+yldf+     +  ++++  lyekcl 
  EPX71602.1 282 LVNWRKYLDFEEI---EGDFSRIYYLYEKCLV 310
                 4458888888876...5556677777777765 PP

  == domain 4  score: -0.5 bits;  conditional E-value: 0.12
      NRDE-2  70 LllelLklgseiwdsek.lakeWeellkenpnsvkLWreyldfrqsnfasf 119
                 L+ e +kl+ ++  +++  ++++++ +    +s   W+ yl f++++  ++
  EPX71602.1 430 LITEDIKLVWKVEGNSElARSKFSQNAAAMLDSRYFWISYLRFELEQPLTL 480
                 555666666666544441556788888888899999*******99965444 PP

  == domain 5  score: -1.6 bits;  conditional E-value: 0.25
      NRDE-2  72 lelLklgseiwdse..klakeWeellkenpnsvkLWreyldfrqsnfasfsvek 123
                 +++++l+ ++       l+k + e+l+  ++s +   eyl+  +++f  fsv +
  EPX71602.1 494 MKYIRLYTRLAPRTvmDLTKIYMEYLNYRSTSPNAVSEYLSLDRETFGPFSVRE 547
                 556666666644442246677777777777777777788888888887777766 PP

>> Suf  Suppressor of forked protein (Suf)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.6   1.2e-06    0.0056       3     132 ..      30     169 ..      29     187 .. 0.91
   2 ?    2.9   0.3     0.019        87     110     135 ..     285     310 ..     256     344 .. 0.77

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 1.2e-06
         Suf   3 vwikymrasrRaeG..........ikgaRkvFkkARkkprltyevyvasAllEyyiskdkkvAtkIFelGlKkFpedeefvlkYldyLisln.ddnnaR 90 
                 vw +++ra   +eG          i+  R+v+ +   k  l +  +   A  E+ ++  ++   k++e+G+   p + +  ++Y ++ ++ n d n++R
  EPX71602.1  30 VWEALIRATETIEGgidrnsskqtINTLRSVYDRFLTKFPLLFGYWKKYADFEFFVAGPEA-SEKVYERGIAGIPYSVDLWANYCSFKMETNhDPNEVR 127
                 7899999999999999999999999999*****999999999999**********777666.9**************************999455789* PP

         Suf  91 vlfekvvsklskekeakelykkfleyestfgdlssilklekR 132
                  +f +  + +  +  +++ ++k++e+e ++   + ++++ +R
  EPX71602.1 128 EVFVQGSEMIGLDFLSHPFWDKYIEFEERQERTDFVYQILER 169
                 ************999**************9988888776665 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.019
         Suf 110 ykkfleyestfgdlssilklekRmee 135
                 ++k+l++e   gd s i+ l +++ +
  EPX71602.1 285 WRKYLDFEEIEGDFSRIYYLYEKCLV 310
                 ******************99888765 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   6.8e-05      0.31       5      33 ..     367     395 ..     340     397 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 6.8e-05
      TPR_19   5 gdyaeAlalleqalqedpknaearllLAe 33 
                 g+ a+A a+++++l++ p+n+ea+l+ A+
  EPX71602.1 367 GNIASARAIYQAILTQLPGNLEAALGWAN 395
                 67788888888888888888888887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (621 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       476  (0.0265492); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.63u 0.26s 00:00:00.89 Elapsed: 00:00:00.43
# Mc/sec: 4362.52
//
Query:       EPX71603.1  [L=535]
Description: hexose transporter Ght2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     3e-120  402.2  23.6   3.5e-120  401.9  23.6    1.0  1  Sugar_tr   Sugar (and other) transporter
    1.7e-18   66.7  31.4      4e-14   52.3  11.6    2.2  2  MFS_1      Major Facilitator Superfamily
    4.5e-05   22.2   3.4    4.5e-05   22.2   3.4    3.3  3  MFS_2      MFS/sugar transport protein
  ------ inclusion threshold ------
      0.044   12.2   5.1      0.074   11.4   5.1    1.3  1  MFS_3      Transmembrane secretion effector


Domain annotation for each model (and alignments):
>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  401.9  23.6  7.9e-124  3.5e-120       3     452 .]      18     474 ..      16     474 .. 0.96

  Alignments for each domain:
  == domain 1  score: 401.9 bits;  conditional E-value: 7.9e-124
                 HHHHHHHHHHHHHHHCGGGTHHHHHHHHTST..T--SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTT CS
    Sugar_tr   3 lvaalggllfgYdtgvigafltllkfaknfg..lsksksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgk 99 
                 ++++++g +fg dtg ig+++++ +f++++   ++  ++s+  ss ++gl+v+i+++G++iG++++++l+drfG++ks++  + +++ig+++q+++   
  EPX71603.1  18 IFVSMAGWMFGADTGSIGGVTNMRDFQSRYAdrYDPITDSYSYSSWRQGLLVGIVNIGSLIGCILSSPLADRFGKRKSIIGWTCVYIIGIIIQVTTV-- 114
                 6789*********************9988764344444444459*****************************************************.. PP

                 SS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHHHHHHHHHHGGGS---HHHH CS
    Sugar_tr 100 nsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglglnktsnadgwrillglqlvpallllilllflPESPryl 198
                  s+ ++iv+++ +G+g+G+ svl+P y+sE Ap+++Rg++v+ yql++t Gi++aa++++g+ k +++ +wr+ +g++l++ ++ +i+++flPESPryl
  EPX71603.1 115 PSWIQIIVAKIWTGFGIGALSVLAPGYQSETAPPSIRGTIVVTYQLFVTGGIFIAACVNMGTHKLHKTAQWRVSMGVNLIWGIITFIGIIFLPESPRYL 213
                 89*****************************************************************9******************************* PP

                 HHTT-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH.........HTTHHHHSH...HHHHHHHHHHHHHHTTHHHHHHHTTTHHHHSS-THHHHHH CS
    Sugar_tr 199 vekgkeeeakevlaklrgeedadrelaeekdsleaeqeee....kaswkellssktvrqrlligvvlqifqqltGinaimyysptifenlglsksllvt 293
                 ++ g++e+a +vl+++ + +++++e++ee+  l+++ +ee    + sw +++++ ++r+r+++g+ ++++qqltG+n+++yy+ ++ + +g++ ++l  
  EPX71603.1 214 IQIGRDEDAVKVLSESSEIPPDSPEVQEEYGRLKKSIDEEfaggTCSWPSIFGK-NIRYRTFLGMFVMSLQQLTGNNYFFYYGFQVAQGAGIQSPYLSA 311
                 ***************9999***********************************.99****************************************** PP

                 HHHHHHHHHHHHHHHHHHHHS-SHHHHHHHHHHHHHHHHHHH...HHHHTTSS.......CHHHHHHHHHHHHHHHTTTTHHHHHHHHHHSHTTTHHHH CS
    Sugar_tr 294 iivgvvnfvatfvaiflvdrfGRRtllllGaagmaicfvilg.ivalllvaks....kaasivaivfialfialfalgwgpvpwvlvsElfpqsvRska 387
                 +i+ + nf  tf ++f+ ++fGRR+ l++G++ +++ f+i+g     +l +++    + a+ v+iv+ +lfi+ fa +w+p  +v+v E +p + Rsk+
  EPX71603.1 312 LILDACNFGCTFGGMFTLEYFGRRNPLIIGGLWQSMWFWIYGaVGSRALYHANgtsnTRAGAVMIVCACLFIFGFAQTWAPAAYVIVGESYPVRYRSKC 410
                 ******************************************95555555555578899**************************************** PP

                 HHHHHHHHHHHHHHHHHHHHHHHCHHHT-HHHHHHHHHHHHHHHHHHHHS--STT--CCCCGGGT CS
    Sugar_tr 388 laiavavnwlanflisllfpiiteaigggyvflvfaglavlfiifvfffvpetkgrtleeieelf 452
                 +a+a+ +nwl+nflis+++p+i+++ig +++++vfa+ ++ ++i++fff  etkg++leei+el+
  EPX71603.1 411 AAVATSANWLWNFLISFFTPFIQNSIG-FKYGYVFAASNLTGAIVIFFFAKETKGLSLEEINELY 474
                 ***************************.**********************************986 PP

>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.3  11.6   8.9e-18     4e-14      23     260 ..      54     324 ..      11     328 .. 0.71
   2 !   18.8  13.7   1.4e-07   0.00062      54     186 ..     327     471 ..     319     504 .. 0.77

  Alignments for each domain:
  == domain 1  score: 52.3 bits;  conditional E-value: 8.9e-18
       MFS_1  23 laedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfa.sslw.lllvlrvlqGlgagalfpagaaliadwfpkeer 119
                 +++++ +s   +gll++++ +g++++ ++ ++l+drfG r+ ++    ++++g +++ ++  ++w  ++v+ + +G+g gal  ++  + ++ +p++ r
  EPX71603.1  54 ITDSYSYSSWRQGLLVGIVNIGSLIGCILSSPLADRFGKRKSIIGWTCVYIIG-IIIQVTtVPSWiQIIVAKIWTGFGIGALSVLAPGYQSETAPPSIR 151
                 344455777779*****************************************.6666545677889******************************** PP

       MFS_1 120 graigllsagfslGailgpllggllasslg...Wravfyilaivsllafvlfllllpeepperkrkspkeee....................kgtgpap 195
                 g  +  +++++  G+ +++ +      +     Wr+++ ++ i +++ f+ ++++lpe+p+        e+                      g+ ++ 
  EPX71603.1 152 GTIVVTYQLFVTGGIFIAACVNMGTHKLHKtaqWRVSMGVNLIWGIITFI-GIIFLPESPRYLIQIGRDEDAvkvlsesseippdspevqeeYGRLKK- 248
                 ******************999886654433666***************99.55999999999988888888799888888777777777666333333. PP

       MFS_1 196 lvp..........awkallkdpvlwillialllfffgfsg........lltllplylqevlgls.glllaglllallalvgail 260
                   +           w +++ ++    + +  +l++f++s+        ++++ +    +  g+    +l++l+l ++ +++ ++
  EPX71603.1 249 --SideefaggtcSWPSIFGKN----IRYRTFLGMFVMSLqqltgnnyFFYYGFQV-AQGAGIQsP-YLSALILDACNFGCTFG 324
                 ..13447777888788888888....444444444444443333333255555553.666666643.55555555555555444 PP

  == domain 2  score: 18.8 bits;  conditional E-value: 1.4e-07
       MFS_1  54 rlsdrfGrrrvlllglllfalglllll.f...a.......ss....lw.lllvlrvlqGlgagalfpagaaliadwfpkeergraigllsagfslGail 136
                 +  + fGrr  l++g l+ + ++++   +   a       s+       +++++ ++ G+++ + +pa+++++ + +p + r++  +++++++ l   l
  EPX71603.1 327 FTLEYFGRRNPLIIGGLWQSMWFWIYGaVgsrAlyhangtSNtragAVmIVCACLFIFGFAQ-TWAPAAYVIVGESYPVRYRSKCAAVATSANWLWNFL 424
                 456789****************77777434441444444411555555589999*******7.99********************************** PP

       MFS_1 137 gpllggllasslgWravfyilaivsllafvlfllllpeepperkrkspke 186
                    + +++  s+g+ + ++++a  +  a+v+  +++ +++++    +++ 
  EPX71603.1 425 ISFFTPFIQNSIGFKYGYVFAASNLTGAIVI--FFF-AKETKGLSLEEIN 471
                 ****************999999999999884..555.4444444433333 PP

>> MFS_2  MFS/sugar transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   3.4   9.9e-09   4.5e-05     264     335 ..      68     138 ..      64     146 .. 0.93
   2 ?   -3.7   5.2      0.74   3.3e+03     234     327 ..     278     387 ..     263     402 .. 0.53
   3 ?   -3.7   6.2      0.74   3.3e+03     234     308 ..     380     459 ..     363     468 .. 0.62

  Alignments for each domain:
  == domain 1  score: 22.2 bits;  conditional E-value: 9.9e-09
       MFS_2 264 fllvvtisallgiplwqplakrlgkkntyllgalltivllvlvlllqpsnlllflvllviagfgvgvaallp 335
                 + ++v i++l+g +l +pla r+gk+++++  ++++i++ ++ +     +++  +v+ + +gfg+g++ +l+
  EPX71603.1  68 LVGIVNIGSLIGCILSSPLADRFGKRKSIIGWTCVYIIGIIIQVTT-VPSWIQIIVAKIWTGFGIGALSVLA 138
                 567899***************************************9.999****************998876 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 0.74
       MFS_2 234 llaalalgvlnglllYyltyvlgngsaasvfllvvtisal..lgiplwqplakrlgkkntyllgalltivllvlvlll..............qpsnlll 316
                 ++ +l ++ +n+ + Yy   v   +   s +l ++++ a     ++        +g++n  ++g l + + + +  ++              +++ +++
  EPX71603.1 278 FVMSLQQLTGNNYFFYYGFQVAQGAGIQSPYLSALILDACnfGCTFGGMFTLEYFGRRNPLIIGGLWQSMWFWIYGAVgsralyhangtsntRAGAVMI 376
                 344455555666666665555553333333333333333321333333333344566655555555444443333333444447778888888888888 PP

       MFS_2 317 flvllviagfg 327
                 ++++l+i+gf+
  EPX71603.1 377 VCACLFIFGFA 387
                 99999988887 PP

  == domain 3  score: -3.7 bits;  conditional E-value: 0.74
       MFS_2 234 llaalalgvlnglllYyl...tyvlgngsaasvfllvv.tisallgiplwqplakrlg.kkntyllgalltivllvlvll 308
                  l++++++ + + ++Y++    y ++ +s+ +++++ +  + ++l +++ + ++  +g k+ ++++++ lt ++ +++++
  EPX71603.1 380 CLFIFGFAQTWAPAAYVIvgeSYPVRYRSKCAAVATSAnWLWNFLISFFTPFIQNSIGfKYGYVFAASNLTGAIVIFFFA 459
                 33344444444444444333345566666666666666577888999999999999996667777777777777777665 PP

>> MFS_3  Transmembrane secretion effector
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   5.1   1.7e-05     0.074     256     360 ..      65     170 ..      55     207 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 1.7e-05
       MFS_3 256 yGillgalGvGAilgalllsrLRerlsser.lvllaavalAlvllslalasslwvavlvlllgGaaWitalstlnvavql.avPrWvvgRalavYltvl 352
                  G+l+g + +G ++g +l+s L +r+++ + ++  ++v +  ++++++ ++s  +++++ + +G   i als l    q  + P  ++g  +  Y+  +
  EPX71603.1  65 QGLLVGIVNIGSLIGCILSSPLADRFGKRKsIIGWTCVYIIGIIIQVTTVPSWIQIIVAKIWTGF-GIGALSVLAPGYQSeTAPPSIRGTIVVTYQLFV 162
                 599***********************876527778888888888888888776666666666665.5*********999735699************** PP

       MFS_3 353 aGglaaGs 360
                 +Gg+   +
  EPX71603.1 163 TGGIFIAA 170
                 ***96443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (535 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       921  (0.0513693); expected 358.6 (0.02)
Passed bias filter:                      526  (0.0293379); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.29s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 3758.03
//
Query:       EPX71604.1  [L=248]
Description: U1 snRNP-associated protein Usp102 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-23   82.4   0.0    1.3e-10   41.0   0.0    2.3  2  RRM_1         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
    1.2e-10   41.1   0.0    3.3e-05   23.5   0.0    2.1  2  RRM_5         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
    1.4e-06   28.0   0.0     0.0025   17.6   0.0    2.4  2  RRM_occluded  Occluded RNA-recognition motif
    0.00064   19.9   0.0       0.31   11.3   0.0    2.2  2  RRM_8         RRM-like domain
  ------ inclusion threshold ------
      0.031   14.5   0.4         13    6.0   0.1    3.2  3  PHM7_cyt      Cytosolic domain of 10TM putative phosphate tra
       0.04   13.8   0.0       0.11   12.3   0.0    1.7  2  DUF4523       Protein of unknown function (DUF4523)
      0.076   13.1   0.0       0.18   11.9   0.0    1.6  1  Limkain-b1    Limkain b1


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.4   0.0   1.6e-13     4e-10       1      69 [.      27      97 ..      27      98 .. 0.76
   2 !   41.0   0.0   4.9e-14   1.3e-10       2      69 ..     176     239 ..     175     240 .. 0.94

  Alignments for each domain:
  == domain 1  score: 39.4 bits;  conditional E-value: 1.6e-13
                EEEESETTTSSHHHHHHHHHT.TSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1  1 lfVgnLppdvteeeLkelFsk.fGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrel 69
                l+++n+ + +   +Lk+++++ fG + +i  v+  +t + +g afV Fe+  dA +Al+ l+g+ l g+++
  EPX71604.1 27 LYIRNIEEKIRITMLKQILEHlFGAYGKILSVHArKTLRMRGQAFVVFENLQDASRALQDLQGYPLYGKPM 97
                6777777776666666655555555555555555569*****************************99975 PP

  == domain 2  score: 41.0 bits;  conditional E-value: 4.9e-14
                 EEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   2 fVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                  + nLp++vt e L ++F+ + +++++++v+      +g+afVe++++++A  A++   g+ l g+++
  EPX71604.1 176 LLQNLPQEVTAEILTQIFEAYQGFQEVRMVPG----RRGIAFVEYDTEREAGIAKNGTAGMALSGSQV 239
                 678****************************7....********************999999988876 PP

>> RRM_5  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.0   1.3e-08   3.3e-05      42     113 ..      43     119 ..       5     126 .. 0.79
   2 !   15.8   0.0   3.1e-06    0.0079      25     101 ..     171     246 ..     148     248 .] 0.92

  Alignments for each domain:
  == domain 1  score: 23.5 bits;  conditional E-value: 1.3e-08
       RRM_5  42 dklFnlfclYgnvervkflkt..kketalvqmgdasaveravqHLnnaklfgkrlevalSKqqa..vse.kepfele 113
                 + l  lf+ Yg +  v   kt   +++a+v   + +++ ra+q L++ +l+gk++ +++S+ ++  + + ++p +le
  EPX71604.1  43 QILEHLFGAYGKILSVHARKTlrMRGQAFVVFENLQDASRALQDLQGYPLYGKPMMIQFSRTKSdaILQlQDPKQLE 119
                 556689********999988833579***************************999999966541154445555555 PP

  == domain 2  score: 15.8 bits;  conditional E-value: 3.1e-06
       RRM_5  25 egsVllVyglepdkvnldklFnlfclYgnvervkflktkketalvqmgdasaveravqHLnnaklfgkrlevalSKq 101
                  + Vll  +l p++v+++ l  +f  Y   + v+++  +++ a+v+   ++++  a +   +  l g++++v++ ++
  EPX71604.1 171 PNKVLLLQNL-PQEVTAEILTQIFEAYQGFQEVRMVPGRRGIAFVEYDTEREAGIAKNGTAGMALSGSQVKVTFARK 246
                 589******9.5689*********************************************************99876 PP

>> RRM_occluded  Occluded RNA-recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.0   0.00094       2.4       2      68 ..      25      97 ..      24     106 .. 0.79
   2 !   17.6   0.0   9.7e-07    0.0025       2      69 ..     173     240 ..     172     245 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00094
  RRM_occluded  2 rtisllplsDtvnkariralveek...egeikkivLvpd...heGAivefkdekiagkasLaLdgsefegkkl 68
                  +t+ + ++ +++  + +++++e+     g+i  ++ +      + A+v+f++ ++a +a+  L+g+ + gk +
    EPX71604.1 25 ETLYIRNIEEKIRITMLKQILEHLfgaYGKILSVHARKTlrmRGQAFVVFENLQDASRALQDLQGYPLYGKPM 97
                  578888999999999999999998775477777776654111567********************99988765 PP

  == domain 2  score: 17.6 bits;  conditional E-value: 9.7e-07
  RRM_occluded   2 rtisllplsDtvnkariralveekegeikkivLvpdheG.AivefkdekiagkasLaLdgsefegkklr 69 
                   +++ l +l+  v+ + +++++e + + ++++ +vp  +G A+ve++ e+ ag a     g+ ++g +++
    EPX71604.1 173 KVLLLQNLPQEVTAEILTQIFEAY-QGFQEVRMVPGRRGiAFVEYDTEREAGIAKNGTAGMALSGSQVK 240
                   678899******************.************999***********988766666666555554 PP

>> RRM_8  RRM-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.3   0.0   0.00012      0.31      24      78 ..      40      95 ..      18     106 .. 0.80
   2 !    6.6   0.0    0.0034       8.8      23      43 ..     183     204 ..     174     235 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00012
       RRM_8 24 vtsevLhqvYdaYGav.avqvLavstwqvealvsflsshDaerarsathgrniYDg 78
                + +++L+  + aYG + +v+   +  ++ +a v+f   +Da ra  + +g  +Y +
  EPX71604.1 40 MLKQILEHLFGAYGKIlSVHARKTLRMRGQAFVVFENLQDASRALQDLQGYPLYGK 95
                556889999999997526787778888899***************99999998876 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0034
       RRM_8  23 pvtsevLhqvYdaY.Gavavqv 43 
                  vt e+L q+++aY G  +v++
  EPX71604.1 183 EVTAEILTQIFEAYqGFQEVRM 204
                 69************55556655 PP

>> PHM7_cyt  Cytosolic domain of 10TM putative phosphate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.1     0.005        13     117     141 ..      62      93 ..      37     146 .. 0.75
   2 ?    0.4   0.0      0.26   6.5e+02       3      28 ..     174     198 ..     172     206 .. 0.79
   3 ?    4.6   0.0     0.013        34     121     140 ..     208     226 ..     182     246 .. 0.71

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.005
    PHM7_cyt 117 vkkkplgaaFvtfesersaaavak.......q 141
                  + + +g aFv fe+ ++a  +++       +
  EPX71604.1  62 KTLRMRGQAFVVFENLQDASRALQdlqgyplY 93 
                 34577999************998766554440 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.26
    PHM7_cyt   3 TvlvtgiPkelrseeklkeffeelyp 28 
                  +l++++P+e++  e l ++fe ++ 
  EPX71604.1 174 VLLLQNLPQEVT-AEILTQIFEAYQG 198
                 5899********.8899999987654 PP

  == domain 3  score: 4.6 bits;  conditional E-value: 0.013
    PHM7_cyt 121 plgaaFvtfesersaaavak 140
                 ++g+aFv++++er+a  + k
  EPX71604.1 208 RRGIAFVEYDTEREAGIA-K 226
                 489************876.4 PP

>> DUF4523  Protein of unknown function (DUF4523)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   4.3e-05      0.11      84     146 ..      22      88 ..      11     103 .. 0.84
   2 ?   -1.8   0.1      0.96   2.5e+03      31      47 ..     168     184 ..     116     191 .. 0.62

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 4.3e-05
     DUF4523  84 pplstivvrWlkknlkptedlksviqrLsvfGpiesv....tlcGrqsavvvfkdiisackavsafq 146
                  p  t+ +r ++ +++ t+  + + +   ++G+i sv    tl  r  a vvf+++  a++a + +q
  EPX71604.1  22 NPSETLYIRNIEEKIRITMLKQILEHLFGAYGKILSVharkTLRMRGQAFVVFENLQDASRALQDLQ 88 
                 57789999*********998888778889********55545667899**************98766 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.96
     DUF4523  31 lsgleriLarkklPkei 47 
                 l   +++L  ++lP+e+
  EPX71604.1 168 LLPPNKVLLLQNLPQEV 184
                 33334555555555555 PP

>> Limkain-b1  Limkain b1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0     7e-05      0.18      41      80 ..      67     105 ..      25     111 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 7e-05
  Limkain-b1  41 gksavlrfanqeaaeralkrleneDvfGnritvsekprnk 80 
                  + a + f+n + a+ral+ l++   +G+ + ++++ r+k
  EPX71604.1  67 RGQAFVVFENLQDASRALQDLQGYPLYGKPMMIQFS-RTK 105
                 457999************************999998.444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       568  (0.0316805); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 1708.40
//
Query:       EPX71605.1  [L=176]
Description: ESCRT II complex subunit Vps25 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.5e-41  139.7   4.9    3.2e-40  137.6   3.6    1.9  2  ESCRT-II  ESCRT-II complex subunit


Domain annotation for each model (and alignments):
>> ESCRT-II  ESCRT-II complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.6   3.6   1.8e-44   3.2e-40       1     128 [.       6     132 ..       6     138 .. 0.94
   2 ?    1.4   0.0      0.02   3.5e+02      68      88 ..     143     163 ..     138     173 .. 0.79

  Alignments for each domain:
  == domain 1  score: 137.6 bits;  conditional E-value: 1.8e-44
    ESCRT-II   1 eysFpPfFTlqpnlttrkkqlekWsslilaycrhhrifklslseaeeeeeeselFknkkinRrlsledirevleelvkkgraewvdkek..skalvywr 97 
                 +y+FpPfFT+q n++t+++q ++W+++i+ +cr+hri++l+++   +   e +l +n++i+R+l+l  +re++e++vk+++aew++k++  ++++vywr
  EPX71605.1   6 IYNFPPFFTRQVNENTWQSQKSAWQKWIHIWCREHRITQLTIH---SGLLECPLIYNESIHRTLPLPVFREIVEDMVKQNDAEWTQKKEprDTFWVYWR 101
                 6******************************************...445789*********************************76656699****** PP

    ESCRT-II  98 tpeewasliyewveetgqkgsvlTlyeLteg 128
                 +++ew+++i +w+ +tg  g v+T+yeL+e 
  EPX71605.1 102 SIAEWGDIITKWLFDTGRDGAVCTYYELQEQ 132
                 ****************************985 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.02
    ESCRT-II  68 direvleelvkkgraewvdke 88 
                  +++vle l+kkg++e ++++
  EPX71605.1 143 LLHKVLESLMKKGNVELMKGS 163
                 6789************98554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       556  (0.0310112); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.28s 00:00:00.73 Elapsed: 00:00:00.45
# Mc/sec: 1173.41
//
Query:       EPX71606.1  [L=77]
Description: Sm snRNP core protein Smg1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.9e-22   76.6   0.4    9.8e-22   76.4   0.4    1.0  1  LSM       LSM domain


Domain annotation for each model (and alignments):
>> LSM  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.4   0.4   5.5e-26   9.8e-22       2      66 ..       8      71 ..       7      72 .. 0.98

  Alignments for each domain:
  == domain 1  score: 76.4 bits;  conditional E-value: 5.5e-26
                HHHHTTTSEEEEEETTSEEEEEEEEEEETTSEEEEEEEEEEETTETEEEEEEEEEEEGGGEEEEE CS
         LSM  2 flkklinkkvtvelkngrelrGtLkgfDqfmNlvLedveetlkdkkekrklglvliRGnnivlis 66
                +lkk+++k+v v+l++ r++ G+L+g+D f+N+vLed++e + ++ ek k+g v iRGn++++i+
  EPX71606.1  8 DLKKYLDKQVFVQLNGSRKVYGVLRGYDIFLNIVLEDTTEEKANG-EKVKIGSVTIRGNSVIMIE 71
                79*******************************************.*****************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       469  (0.0261587); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.43
# Mc/sec: 536.56
//
Query:       EPX71607.1  [L=576]
Description: translation initiation factor eIF2A [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.2e-80  267.3   0.1    3.5e-79  265.2   0.0    2.1  3  eIF2A        Eukaryotic translation initiation factor eIF2A
    0.00077   20.2   0.1       0.19   12.6   0.0    4.2  5  WD40         WD domain, G-beta repeat
  ------ inclusion threshold ------
      0.023   15.0   0.0       0.93    9.8   0.0    3.3  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain


Domain annotation for each model (and alignments):
>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       0.7   4.2e+03     150     165 ..      41      56 ..      16      66 .. 0.66
   2 ?   -2.2   0.0      0.55   3.3e+03     110     158 ..      44      88 ..      40     124 .. 0.51
   3 !  265.2   0.0   5.9e-83   3.5e-79       1     194 []     210     404 ..     210     404 .. 0.99

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.7
                 EE-TTSSEEEEEE-TT CS
       eIF2A 150 ewspdgryvlTattap 165
                  +sp+g+y++ a+   
  EPX71607.1  41 CYSPNGKYFAYASPNN 56 
                 3788888887776555 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.55
                 TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-TT--EEEE-TTSSEE CS
       eIF2A 110 pkgklvllaGfgnlaGeleiwdvkkkkkiakaeaanatlvewspdgryv 158
                 p+gk+++ a   n+     i d  + k+++ +  +n   + +sp g+++
  EPX71607.1  44 PNGKYFAYASPNNV----VIIDAGSGKTLTILPVTNVYELGFSPLGNFL 88 
                 44444444443333....3344444444444444444444444444444 PP

  == domain 3  score: 265.2 bits;  conditional E-value: 5.9e-83
                 EEESSECEEEEEE-TTTTEEEEEEE.E--TT-CEEEEEEEEEESSSTT--EEECCEESSS.EEEEEE-TTSS-EEEEESSSSCEEEEEECSCEEEEEEE CS
       eIF2A   1 ksffkadkvklkWnkkGtsllvlvstevdktnksyygetelyliklkkkksevvelkkegpihdvaWspkskefaviyGkmpakvslfdlkvkviskle 99 
                 k+ffkadkv++kWn+ Gtsllvl++t+vdk+nk+yyget+lyl++++++++++v+l++egpihdvaW+++skef ++yG+mpak+s++d++++vi++l 
  EPX71607.1 210 KTFFKADKVQFKWNALGTSLLVLTQTDVDKSNKNYYGETNLYLLGITGQFDCRVDLDREGPIHDVAWNSNSKEFGIVYGYMPAKTSIYDSRANVIHTLP 308
                 89************************************************************************************************* PP

                 EES--EEEE-TTSSEEEEE-TTSSS-EEEEEETT.TTEEEEEEE-TT--EEEE-TTSSEEEEEE-TTT-SSS-EEEEEETTTEEEEEEE-TTEEEE CS
       eIF2A 100 eqkrNtiffspkgklvllaGfgnlaGeleiwdvk.kkkkiakaeaanatlvewspdgryvlTattaprlrvdngfkiwsysGklvykkefdelyqv 194
                  ++rNt++fsp+ ++++laGfgnl+G+++i+d+  ++kki+++eaan+t +e+spd++++lTa+t+prlrvdn++kiw+++G+ ++ +ef elyq+
  EPX71607.1 309 LAPRNTLLFSPNSRYIMLAGFGNLQGSIDIFDRLnQMKKITTVEAANSTFCEFSPDSQFLLTAVTSPRLRVDNSIKIWHITGAPMFYEEFVELYQA 404
                 *********************************989**********************************************************95 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.47   2.8e+03      17      26 ..      41      50 ..      33      70 .. 0.72
   2 ?   -0.2   0.0      0.36   2.2e+03      13      38 .]      76     110 ..      65     110 .. 0.67
   3 ?   -1.9   0.0       1.3   7.8e+03      12      22 ..     270     280 ..     257     283 .. 0.82
   4 ?    0.3   0.0      0.26   1.6e+03      15      28 ..     314     328 ..     302     340 .. 0.75
   5 !   12.6   0.0   3.2e-05      0.19      16      37 ..     359     386 ..     343     387 .. 0.71

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.47
                EEETTSSEEE CS
        WD40 17 afspdgawla 26
                ++sp+g+++a
  EPX71607.1 41 CYSPNGKYFA 50
                3799999975 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.36
                 EEEEEEETTSSEEEEEET...........TSEEEEEE CS
        WD40  13 vtslafspdgawlasGsd...........DgtvriWd 38 
                 v+ l fsp g++l  G++           +++ +iW+
  EPX71607.1  76 VYELGFSPLGNFL--GTWerpgkeadgnpKQNMKIWN 110
                 5566699999998..8766666667666677777776 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 1.3
                 SEEEEEEETTS CS
        WD40  12 svtslafspdg 22 
                 +++++a+++++
  EPX71607.1 270 PIHDVAWNSNS 280
                 5999*999987 PP

  == domain 4  score: 0.3 bits;  conditional E-value: 0.26
                 EEEEETTSSEEE.EE CS
        WD40  15 slafspdgawla.sG 28 
                  l fsp++++++ +G
  EPX71607.1 314 TLLFSPNSRYIMlAG 328
                 566*******74377 PP

  == domain 5  score: 12.6 bits;  conditional E-value: 3.2e-05
                 EEEETTSSEEEEE..E....TTSEEEEE CS
        WD40  16 lafspdgawlasG..s....dDgtvriW 37 
                 + fspd+++l+++  s     D++++iW
  EPX71607.1 359 CEFSPDSQFLLTAvtSprlrVDNSIKIW 386
                 34********98854454445******* PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0   0.00016      0.93      35      79 ..      31      74 ..      16      84 .. 0.83
   2 ?    0.2   0.0      0.15   9.1e+02      37      79 ..     267     310 ..     259     318 .. 0.73
   3 ?   -2.7   0.0       1.3   7.6e+03      23      59 ..     341     374 ..     326     388 .. 0.58
   4 ?   -3.6   0.0       2.3   1.4e+04      35      49 ..     561     575 ..     547     575 .. 0.60

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00016
  ANAPC4_WD40 35 dkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvk 79
                 ++ d+ vr  +++p+gk +a a   ++v ++da sgk++  l+v+
   EPX71607.1 31 EEVDEIVRVSCYSPNGKYFAYASP-NNVVIIDAGSGKTLTILPVT 74
                 56677888999*********9865.6688*********9988776 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.15
  ANAPC4_WD40  37 edsevrsLaWkpdgklL..avaysdgevrlldaesgkvvhslsvk 79 
                  +++ ++++aW+ + k +  + +y   + +++d+  ++v+h+l+ +
   EPX71607.1 267 REGPIHDVAWNSNSKEFgiVYGYMPAKTSIYDSR-ANVIHTLPLA 310
                  56789999**999987611556667788888875.6777877765 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 1.3
  ANAPC4_WD40  23 Rlng.qrvwtleedkedsevrsLaWkpdgklLavaysd 59 
                  Rln  +++ t+    e  + +  +++pd ++L  a+  
   EPX71607.1 341 RLNQmKKITTV----EAANSTFCEFSPDSQFLLTAVTS 374
                  55442444444....33333445667777777666655 PP

  == domain 4  score: -3.6 bits;  conditional E-value: 2.3
  ANAPC4_WD40  35 dkedsevrsLaWkpd 49 
                   k  +e ++L W+p+
   EPX71607.1 561 GKVLEELKALGWNPN 575
                  444566778888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (576 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       811  (0.045234); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.29s 00:00:00.88 Elapsed: 00:00:00.45
# Mc/sec: 3876.22
//
Query:       EPX71608.1  [L=854]
Description: RSC complex subunit Rsc1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.5e-28   96.3   1.5    6.2e-20   71.1   0.3    2.5  2  Bromodomain  Bromodomain
    1.9e-23   82.6   0.1    6.8e-23   80.8   0.0    1.9  2  BAH          BAH domain


Domain annotation for each model (and alignments):
>> Bromodomain  Bromodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.0   3.9e-09   3.5e-05      32      81 ..      67     117 ..      23     120 .. 0.82
   2 !   71.1   0.3   6.9e-24   6.2e-20      11      83 ..     259     331 ..     247     332 .. 0.94

  Alignments for each domain:
  == domain 1  score: 23.8 bits;  conditional E-value: 3.9e-09
                  H.SS---HHHHHHHHHTT--SSHHHHHHHHHHHHHHHH.HHSHTTSHHHHH CS
  Bromodomain  32 vikkPldLstIkkklesnkYksladfeadlkllfsNar.kyngegsviyel 81 
                  ++++P +L+ I+ k+es+ Y+ l +f  d+ +l+ N +  y+g++s  +++
   EPX71608.1  67 ASNRPTCLKAIQLKIESSAYRDLSEFVFDIAQLIANVKfLYHGSQSFSLVC 117
                  679*********************************973566677766555 PP

  == domain 2  score: 71.1 bits;  conditional E-value: 6.9e-24
                  TTCGGGGCSTT-GCCSTTHHHH.SS---HHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHSHTTSHHHHHHH CS
  Bromodomain  11 hklaepFlepvdpeefpdyyavikkPldLstIkkklesnkYksladfeadlkllfsNarkyngegsviyelae 83 
                  ++l +pF++ +dp+ fp+yy++i++P+ L  I+k l++n+Y+sl++f  d++l+f+Na+ +n + s+++ +a+
   EPX71608.1 259 RQLFAPFERLPDPRMFPEYYQAIQRPMALDVIQKTLNKNQYSSLDEFISDFNLMFNNAKSFNDPSSQVFRDAD 331
                  567789***************************************************************9985 PP

>> BAH  BAH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0      0.56     5e+03      19      35 ..      29      45 ..      20      80 .. 0.58
   2 !   80.8   0.0   7.6e-27   6.8e-23       3     122 .]     381     497 ..     380     497 .. 0.98

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 0.56
                EEEEEEEEEEEEETTST CS
         BAH 19 pyqirrIeeLkenakne 35
                +  i+++e+++ +++n 
  EPX71608.1 29 KVLIYFLERIRSAKDNA 45
                55666666666555554 PP

  == domain 2  score: 80.8 bits;  conditional E-value: 7.6e-27
                 EETTGEEEEEETTSTTEEEEEEEEEEEEETTSTCEEEEEEEEEEECGGGS.TTTTHCCCTTEEEEEEEEEEEEGGGEEEEEEEEEHHHHCTECCHCHHC CS
         BAH   3 yavGdfVyfddtstdepyqirrIeeLkenakneeaeatvlvdwflrpeet.ksalklrqkrElfltrqseilplaairgkcrVvllsdleeaqnylpkk 100
                 ++ Gd+V++++ s+ +++++++I +++ +a++     +  v+w++rpe+t ++a++ ++++E+f t  + ++pl++i+++c V++ +++   +++ + +
  EPX71608.1 381 LSIGDWVLLKNPSDFNKPVVAQIFKIWNSADQT---PWITVCWYFRPEQTvHRADRIFYENEVFKTSLYRDHPLSDIIERCFVMYITRYVRGRPKGI-R 475
                 579******************************...************************************************************6.* PP

                 STTEEEEEEEEETTTTEEEE-S CS
         BAH 101 lddtFycslvydptaktfkkdk 122
                    +F+c++ y+  +k+f k+k
  EPX71608.1 476 STPVFVCESRYNDDTKQFSKIK 497
                 ******************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (854 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1056  (0.058899); expected 358.6 (0.02)
Passed bias filter:                      515  (0.0287244); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.69u 0.35s 00:00:01.04 Elapsed: 00:00:00.48
# Mc/sec: 5341.42
//
Query:       EPX71609.1  [L=568]
Description: hypothetical protein SOCG_01826 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-87  293.0   8.0    3.4e-87  292.3   8.0    1.4  1  NCA2      ATP synthase regulation protein NCA2
  ------ inclusion threshold ------
      0.012   15.7   2.9        1.2    9.2   0.1    2.8  2  Erf4      Golgin subfamily A member 7/ERF4 family


Domain annotation for each model (and alignments):
>> NCA2  ATP synthase regulation protein NCA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  292.3   8.0   3.8e-91   3.4e-87       2     288 ..     289     563 ..     288     564 .. 0.94

  Alignments for each domain:
  == domain 1  score: 292.3 bits;  conditional E-value: 3.8e-91
        NCA2   2 lllspsslrllvnsreeilewiqeavetvkgfwknwvvePikellktirhdegs.eiaimskesLesdleSLerMvvdFaednsesklteaeleklrek 99 
                 ll+s+ ++rl++++++++  wi  +++t+++f++nwv++P+  +l+ti +++ + +ia+++++sL+sd++SL+rMv+dF++d+   ++++++l+ ++++
  EPX71609.1 289 LLTSWVTVRLITKNQHSLSVWIDYLYSTLTDFINNWVYKPVLGILDTISSNRADsQIAVIQTQSLDSDMKSLQRMVLDFVRDT---STSTIDLDLVKAQ 384
                 7899*********************************************666555****************************...689********** PP

        NCA2 100 vregdltpvlkaYEkelrsPiknlvsGeLvraLLIQvqktKvDvevAlsgiDklLkSqeLvfgivaltPallilylllkllrallkkgrkaergkrarr 198
                 v+egdltpvl+aYE++l+ Pik+++ G+L+r+LLIQ+qktKvDvevAlsgiD+lLkSq+Lvf+ v++tP+++++y+llk +++ +  +++  + +++r+
  EPX71609.1 385 VQEGDLTPVLQAYEHDLKAPIKTAIAGNLIRTLLIQLQKTKVDVEVALSGIDRLLKSQQLVFATVGITPSIIFCYALLKQFQKNFL-KKSVLSLSERRQ 482
                 ***********************************************************************************999.45547888899* PP

        NCA2 199 qllrslrnierlltessaeeeekeekeeenelsykdqGllllevhvLrklaekllpke.lekefleDledLekvklgvekklkvveRirrv 288
                 ++++s+r++er+l   s          ++++l++k++Gll+++v+++ +l+++l+ ++ +++++l+Dled++++ +g++++l++++Ri+r 
  EPX71609.1 483 RFRQSMRDAERILLC-S---------GQKKTLDDKKYGLLVFQVNTMAELSKELAISKhMQEDLLQDLEDIQTNAYGISSQLRAIDRIYRL 563
                 *************87.3.........34567999*********************88857777*************************997 PP

>> Erf4  Golgin subfamily A member 7/ERF4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.1   0.00014       1.2      23      77 ..      36      92 ..       6     112 .. 0.80
   2 ?    5.6   0.4    0.0019        17      34      92 ..     256     313 ..     254     327 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00014
        Erf4 23 peLsgy.iseeefeeiinkiNeilaeafspysvrnildnvlglltlylwslvlk..th 77
                ++L+g  is+ +++ +i++i +   ++++p  +++il  + + l ++l++++++  t+
  EPX71609.1 36 QQLDGTsISKYQLRLVIQEIQKLENKQHDP-LYWSILGRCSATLHIMLLKKLMNetTE 92
                7899999***********************.999*******************95433 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.0019
        Erf4  34 feeiinkiNeilaeafspysvrnildnvlglltlylwslvlkthykkklkklekyieel 92 
                 fe+ii+   + l+ +   +s +++  + +++lt+ l s+v+   + k+ ++l+ +i+ l
  EPX71609.1 256 FETIIKPSEQQLQAKQY-FSPSTFERSWFKVLTALLTSWVTVRLITKNQHSLSVWIDYL 313
                 78888888888876666.5999999999**************9999******9999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (568 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       742  (0.0413855); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 3958.25
//
Query:       EPX71610.1  [L=403]
Description: fumble family pantothenate kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   3.7e-138  460.2   0.6   4.3e-138  460.0   0.6    1.0  1  Fumble        Fumble
  ------ inclusion threshold ------
      0.085   12.4   0.0       0.15   11.6   0.0    1.4  1  Pribosyltran  Phosphoribosyl transferase domain
       0.11   12.8   0.1       0.74   10.1   0.0    2.3  2  DUF1882       Domain of unknown function (DUF1882)


Domain annotation for each model (and alignments):
>> Fumble  Fumble
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  460.0   0.6  7.1e-142  4.3e-138       1     330 []      62     389 ..      62     389 .. 0.93

  Alignments for each domain:
  == domain 1  score: 460.0 bits;  conditional E-value: 7.1e-142
      Fumble   1 hiavDiGgsLaKlvYfsrkkkksaaekekeeeveeeeeseelggrLhfikfetekieevleflkelllkskekekkkk.tikaTGGGaykyaelikeel 98 
                 hiavDiGgsLaK+ Y+ r     ++++ +++++e +e++++ ggrL f+kfet+ki+++++++++l++++++++++k  t++aTGGGayk+++++++el
  EPX71610.1  62 HIAVDIGGSLAKILYYVR-----DTTSPSSSSSEINEKETDHGGRLSFAKFETSKIDDCINLMRQLIQDHARESRRKPvTVMATGGGAYKFYDRMSKEL 155
                 89****************.....3333333334444457889************************99988776655569******************* PP

      Fumble  99 gvevekedemeclikGlkfllteipkevftyseekpkkavekkeseeiyPylLvniGSGvsilkvegeekfervgGtslgGgtfwGLlslLtgaksfde 197
                 +vev +edemecli+Gl++l++ ip evf+ + e+ + +++++ ++  yP++LvniGSGvsilkv+g++kfer+gG+slgGgt+wGLlslLt+a+sfde
  EPX71610.1 156 NVEVIREDEMECLITGLDYLVSCIPGEVFMLNPETCEMTFQEQFHDGKYPHMLVNIGSGVSILKVTGPSKFERIGGSSLGGGTLWGLLSLLTHASSFDE 254
                 ********************************767788888888999**************************************************** PP

      Fumble 198 llelaekGdnskvDmlvgDiyGe..dyekiglksdliassfgkvfkkkkkkeeeekeDiarslLyaisnnigqiaylqaklhnlkriyFgGsfirgheq 294
                 +lel++kGdn+ vDmlvgDiyGe   ye+iglk ++iassfgkvf+++kk +e   eDiarslL aisnnigqiayl+a++hn+k+iyFgGsfir+h q
  EPX71610.1 255 MLELSKKGDNAAVDMLVGDIYGEniGYERIGLKDSTIASSFGKVFRENKKLDEFLPEDIARSLLLAISNNIGQIAYLHAQKHNVKNIYFGGSFIRNHVQ 353
                 **********************9789*********************988777777******************************************* PP

      Fumble 295 tmktlsyaikfwskgelkalFlrHegylGavGaflk 330
                 tm+tl+yai+fws+++++a+FlrHegylG  Gaflk
  EPX71610.1 354 TMHTLTYAIQFWSNQTMNAYFLRHEGYLGVFGAFLK 389
                 **********************************96 PP

>> Pribosyltran  Phosphoribosyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   2.5e-05      0.15      12      55 ..     116     159 ..     108     164 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2.5e-05
                   EEEEEETTEEEEEE--GGGEEEEEEETTTHHHHHHHHHHSTT-E CS
  Pribosyltran  12 ldavarlaaeileeyngkpdvvvgiargGvpfakiladeLevpl 55 
                   ++  ++l++++ +e ++kp++v++   g++ f +++++eL+v++
    EPX71610.1 116 INLMRQLIQDHARESRRKPVTVMATGGGAYKFYDRMSKELNVEV 159
                   557899999*******************************9975 PP

>> DUF1882  Domain of unknown function (DUF1882)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00012      0.74      27      56 ..      96     129 ..      86     139 .. 0.81
   2 ?   -0.9   0.0      0.34     2e+03      35      52 ..     145     162 ..     135     169 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00012
                 EEETTEEEEE-EE..EE-S-..--HHHHHHHHTT CS
     DUF1882  27 itfkgRtfydKfe..rvdap..LtssvikkHlkk 56 
                  ++ gR+ ++Kfe  ++d+   L +++i++H+++
  EPX71610.1  96 TDHGGRLSFAKFEtsKIDDCinLMRQLIQDHARE 129
                 5799********9778**96226689*****975 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.34
                 EE-EEEE-S---HHHHHH CS
     DUF1882  35 ydKfervdapLtssvikk 52 
                 y  ++r+ + L+ +vi++
  EPX71610.1 145 YKFYDRMSKELNVEVIRE 162
                 77799999****999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (403 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       570  (0.0317921); expected 358.6 (0.02)
Passed bias filter:                      532  (0.0296726); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.28s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 2808.18
//
Query:       EPX71611.1  [L=623]
Description: PTR family peptide transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.1e-101  339.1  11.8     6e-101  338.1  11.7    1.5  1  PTR2      POT family
  ------ inclusion threshold ------
       0.77   10.1   5.9        4.3    7.7   0.1    3.2  3  DUF1772   Domain of unknown function (DUF1772)


Domain annotation for each model (and alignments):
>> PTR2  POT family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  338.1  11.7  6.7e-105    6e-101       1     394 [.     160     543 ..     160     548 .. 0.95

  Alignments for each domain:
  == domain 1  score: 338.1 bits;  conditional E-value: 6.7e-105
                 CHHHHHHHHHHHHHHHHCCCCTTTTSS--S--.TCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTT-SSSSCHHHH................HHHHHHH CS
        PTR2   1 fktIllgsiiyaiGhvvlalsaipslksaesa.gvrvallfigLalIalGtGgiKpnvSafgadqfeekdprersr................fFsiFyf 82 
                 ++tI ++++iy++G+++l+++aips+++a ++ g     ++++L++I++GtGgiK+nvS+++a+q+++  p+ ++                 ++++Fy+
  EPX71611.1 160 YNTIWISAAIYFVGILILTCTAIPSVVDAGKSmG----GFVVSLIIIGIGTGGIKSNVSPLMAEQLPKVPPYVKTLkngnrvivdpaistsrVYMLFYW 254
                 79**************************977764....7************************************************************ PP

                 HHHHHHHHHHHHHHHHHCTT-HHHHHHHHHHHHHHHHHHHHCTTTS-EE------SHHHHCCCHSHHHHHCCCHHHHHHHHHHHHHSHHHHHH---HHC CS
        PTR2  83 siNvGSLlsliitpylqenvgyplgFgipavlmiiallvFllGsrlykkkppkgnvltkvfkvllvaaknkvkkirssagkkklhwldkakeldkalsi 181
                 +iN+GSL s+++t+ l+ + g+ + +++p +++ii+l++ + ++r+yk++pp g+++ +v++v+++a++n+++     a+k   + ++ +  l      
  EPX71611.1 255 AINLGSL-SVLATTNLERKTGFVYCYLLPLCVFIIPLVIVFTTKRIYKHTPPAGSIFVRVSQVFYLAIQNRFN---FEATKPSYPDTKGKVAL------ 343
                 *******.****************************************************************4...44444555555555444...... PP

                 CHCHHHHHHHHH-HHTHHCHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHTST-BESSCB--GGGGHHHHHHHHHHHHHHHHHCTHHHHHHTTSSC CS
        PTR2 182 leivvegivfnimtkkkveevkrllrvvplflpliifwalyaQmgttlvlqartmnrkigsfeippaqlqvlnailillliPifdklvypllrkltlgl 280
                           n +   +++e  r+lr+++ fl+++++w++y+Qm+++l+ qa +m++  g  +++++ +qv+++i+i++++Pi+d  +y llr+l++++
  EPX71611.1 344 ---------KNNWDDLFIDEFLRALRACKTFLFYPFYWVCYNQMTNNLISQAAQMDT--G--NVSNDIFQVFDSIAIIIFVPICDYGLYALLRRLRINF 429
                 .........34688999****************************************..8..************************************* PP

                 CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHT-------....---TCCCHHHHHHHHHHHHHCCCHHHHHHCTSS-TTTCCCCHHHHHHHHHHHHHH CS
        PTR2 281 tslkkiavGlflaslafaiaaivelkraktlpelpeaeev....qisvlwlipqylligiselfasiggleffykeapksmkslitglflltnalgnfl 375
                 +++ +i vG+++a++++++a+++++k++kt+p++  ++++    +i+v+++ip+y+li++se+fa i+g e++y++ap+smks+i++lfllt+a+g++l
  EPX71611.1 430 RPVARISVGFMFATAGMIYASVLQSKIYKTGPCYSHFTDTctynHINVWIQIPAYVLIAFSEIFAVITGYEYAYTKAPASMKSFISSLFLLTTAFGSIL 528
                 ***************************************9*********************************************************** PP

                 HHHHHHHHHCCCT.TTS-S CS
        PTR2 376 ssvlatlvakateskaygw 394
                 s +++++ ++    ++ +w
  EPX71611.1 529 SICISSTAVD----PKLTW 543
                 ******9999....44555 PP

>> DUF1772  Domain of unknown function (DUF1772)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.4     0.022   1.9e+02      53      85 ..     152     182 ..     126     193 .. 0.72
   2 ?    0.9   0.1     0.057   5.1e+02      54      84 ..     254     294 ..     210     308 .. 0.61
   3 ?    7.7   0.1   0.00048       4.3      38      96 ..     518     580 ..     487     601 .. 0.61

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.022
     DUF1772  53 laaraasrgarllylaaaallllsivpyTllvm 85 
                 + a++   +   ++ ++aa+++++i+++T +++
  EPX71611.1 152 V-ADQFLGRYNTIW-ISAAIYFVGILILTCTAI 182
                 2.577778888899.88999*******998876 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.057
     DUF1772  54 a...........araasrgarllylaaaal.lllsivpyTllv 84 
                 +                r++  +y +  +l l++ i+p+ +++
  EPX71611.1 254 WainlgslsvlaTTNLERKTGFVY-C-YLLpLCVFIIPLVIVF 294
                 134555555543334444444444.3.4566777788877665 PP

  == domain 3  score: 7.7 bits;  conditional E-value: 0.00048
     DUF1772  38 vfpplallsalafayla....araasrgarllylaaaallllsivpyTllvmvPtN.....nkLaalk 96 
                 ++ ++a++s+l     +    + a +++  ++y+++a+ +++  + + + +    N     +kL+ ++
  EPX71611.1 518 FLLTTAFGSIL-----SicisSTAVDPKLTWMYAGIAITAFITGIAFFVCFHHYDNmeedeKKLEYAR 580
                 23334444444.....25555889999999***88888877777777777776667433333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (623 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       877  (0.0489152); expected 358.6 (0.02)
Passed bias filter:                      495  (0.0276089); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.30s 00:00:00.93 Elapsed: 00:00:00.46
# Mc/sec: 4045.88
//
Query:       EPX71612.1  [L=480]
Description: phosphatidate cytidylyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.5e-86  288.6  23.3    6.7e-86  288.3  23.3    1.1  1  CTP_transf_1  Cytidylyltransferase family


Domain annotation for each model (and alignments):
>> CTP_transf_1  Cytidylyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  288.3  23.3   3.8e-90   6.7e-86       2     266 .]      95     425 ..      94     425 .. 0.99

  Alignments for each domain:
  == domain 1  score: 288.3 bits;  conditional E-value: 3.8e-90
                   HHHHHHHHHHHHHHHTTTSH.HHHHHHHHHHHHHHHHHHHHTT--SHHHHHHHHH....HHHHHHHHHHTTTSSSHHHHHHHHHHHHHHHHHH---. CS
  CTP_transf_1   2 qRvitalvlilivliilllgglvflllvavvvilalkElirlvrlkkrekrllll.llslvlllllllflylesliallklvlllvlvllllvlkvl 97 
                   +R++++l++i++++ +l++g++++++lv++++i ++kE+i+++++ +rek+l+++ ++++++l+++l+++y+es++++++++++ + ++l lv+   
    EPX71612.1  95 TRTVWTLIMIAMFFSVLAMGHFWVVVLVTLIQIGVYKEVIAIASVPSREKDLPWTkFVNWYFLMTTLYYAYGESIFTYFHHLFVNDSYVLPLVS--- 188
                   7******************************************************************************************999... PP

                   ..HHHHHHHHHHHHHHHHHTHHHH............................TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH---B-S-TT CS
  CTP_transf_1  98 kskskklervilallallyvvlll...........................qslllienikeglllvllllalvvaaDigaYffGklfGktkllpki 167
                         ++r+i+++l+++++vl++                           q++++i+ni+egl+++++++++vv++D++aY++Gk+fGk+ +l+++
    EPX71612.1 189 ------HHRFISFMLYIMGFVLFVaslqkgkykfqfsqfcwthmtlllvvgQAHFIINNIFEGLFWFFVPVCYVVCNDVFAYLCGKMFGKH-PLIEV 278
                   ......8************************************************************************************.***** PP

                   S---BHHHHHHHHHHHHHHHHHHHHHHHCTS................................................---TTSHHHHHHHHHHHH CS
  CTP_transf_1 168 SPkKTveGfigGlvaavvvglllalvlskal................................................alsllhllllslllslva 216
                   SPkKT+eGf+gG++++vvvg+l++ +l+++                                                 a++++hl++++++ slva
    EPX71612.1 279 SPKKTIEGFLGGWLCTVVVGSLITFILMQFDyficpsrdlstsvftgltctpnsvfvphtysvptslvqylhipeavtfAPIYFHLAVFATFSSLVA 375
                   ****************************9889***************************************************************** PP

                   HHHHHHHHHHHHHHT-SSS-S-SSSSS-HHHHHHHHHHHHHHHHHHHHHH CS
  CTP_transf_1 217 vfGDLveSglKRafgiKDsGkliPGhGGilDRlDsllfaapvvylllelf 266
                   +fG++++SglKRaf+iKD+G++iPGhGG++DR+D++++ +++vy+++++f
    EPX71612.1 376 PFGGFFASGLKRAFKIKDFGDSIPGHGGLTDRVDCQFLNGVFVYMYFQSF 425
                   ***********************************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (480 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1391  (0.0775838); expected 358.6 (0.02)
Passed bias filter:                      631  (0.0351944); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 3360.64
//
Query:       EPX71613.1  [L=797]
Description: nucleoporin Nup82 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-09   36.1   2.9    8.6e-06   23.9   0.6    3.2  3  Nup88     Nuclear pore component


Domain annotation for each model (and alignments):
>> Nup88  Nuclear pore component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   0.0   2.1e-05      0.38       2     108 ..       7     106 ..       6     111 .. 0.79
   2 !    1.8   0.1    0.0022        39     261     306 ..     343     389 ..     332     394 .. 0.85
   3 !   23.9   0.6   4.8e-10   8.6e-06     370     708 ..     434     796 ..     425     797 .] 0.71

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 2.1e-05
       Nup88   2 dvleLnkhelFeklregleseveetskkaknLldvkdddlfvWdseescllttnlrsleseekekkvkyQtLlcsnpplfevdrvlvsetgslvaLvGs 100
                 ++  L+kh  F+ +++  + + e       + ++  d +l+v  ++e  l+  +  +  ++  ++++++ +L     + f + ++++s++g+++a+vG+
  EPX71613.1   7 WTDLLEKHPAFKSIHTATD-DLEPL----PKQVCSFDTKLYVAVGNEVRLVDCEHVKH-NKGGSEATSFTKL-THPELNFTIFQLVISPNGKFLAVVGK 98 
                 7778888888988888866.44443....4456778999****999999998887776.3455666666666.566789******************** PP

       Nup88 101 kGvvvlel 108
                 + vvvl l
  EPX71613.1  99 SKVVVLGL 106
                 *****976 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.0022
       Nup88 261 tsvkklqgpltmtPaaedNYgldacailvlpt.vPpivvIatetGkL 306
                 t +  lqgp  + P   d    + c i+ l t v  ++vI+t++G++
  EPX71613.1 343 TLLPALQGPFLIQPLRGDDILDNCCDIVSLGTpVIDVIVISTASGQI 389
                 556789*************999999999998756689********86 PP

  == domain 3  score: 23.9 bits;  conditional E-value: 4.8e-10
       Nup88 370 kLkrDpinesRYfcthnaGvHsvtl.pwinklqkfles.....deedkdslqel..aaeskciveyilCtkplsssevapvlGialls...lpatlvll 457
                  ++ D  ++  +  +h  G Hs+ + +w++ l    e+     +  dk++l ++  + ++++ v   + t+pl++ +  pv+G + ++   l++ ++ l
  EPX71613.1 434 TIHYDHFSPLTFTVYHANGAHSIDVeTWVRDLRLLYENklhfkNARDKKELLDIlsSIPESTEVIERVNTNPLNT-SADPVVGCTQIKypsLGSAFLYL 531
                 5789999999999**********9956999987544431211112233333232112334434555577887755.679********98999999**** PP

       Nup88 458 lsdgevislklvidivpasepllsskedveveeplrklqe.dsFeehIkslLqrs.vsnpilsadkksskspkE..........clqllsratqvlRee 544
                 ++  +v+      ++  +  +   ++ed + +  +   +e ds +   +slL +s  +np ++++ +   +p E          +l+ l  a++ +R+ 
  EPX71613.1 532 TKHRQVTVIDESEHLDMPAIDRDFKNEDLSESFHISINREpDSQNLMYQSLLLQSpFENPYIQTSPERLIVPPElggklgvspySLRFLGTAVNRMRDH 630
                 ******987776666444444333333333322233333346666666666555548888884444444444442233333322688999999999986 PP

       Nup88 545 y.lkkqelvreeiekrvkllkkqkeqqleelqsleeerkslseraeklAekyeeikdkQeklvrrvkkvlkr.lnsklpvlseaeremkkelekikekl 641
                   l +q +   +++ r  l k++  +q + + +l++ r +l  + e   +++ + +++  +   r++ vl+r +n + p+ls++e+++++ele+++e++
  EPX71613.1 631 LdLIHQGI--IALHYRLGLQKEEFLRQRDHIIKLNK-RFNLVSQKEWDTKRFANLEKRILQCEGRADVVLQRcMNVHSPNLSDQEKAFARELERYRERI 726
                 41333333..35777777777777888888888865.666777789999*********************97368899*******************97 PP

       Nup88 642 ...kslknalkqvkkkldkqrkqiakskeeekksslelsekqkktikeiLkeegeeieelikqvkdikki 708
                    + ++++l+ +k  l+  + q +++ ++ + +  +++     ++k++L+++ ++i+ +  ++ +++++
  EPX71613.1 727 lgeRGIEKKLQSIKPLLQHGNMQSKATFSKPSVRPSSIEPVALDQLKQLLTQQNKSIQIMKAKIVSLQTK 796
                 5557899*******9999888888888777677777888888999*************999999988865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (797 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       644  (0.0359195); expected 358.6 (0.02)
Passed bias filter:                      510  (0.0284455); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.29s 00:00:00.98 Elapsed: 00:00:00.47
# Mc/sec: 5045.33
//
Query:       EPX71614.1  [L=178]
Description: nuclear cap-binding complex small subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.7e-16   58.1   0.0    8.3e-16   57.6   0.0    1.3  1  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.6   0.0   4.6e-20   8.3e-16       1      69 [.      34     103 ..      34     104 .. 0.97

  Alignments for each domain:
  == domain 1  score: 57.6 bits;  conditional E-value: 4.6e-20
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrel 69 
                 ++VgnL++++tee++++lFsk+G++++i +  d   +++ gf+fVe+ + edA ++l+   g++l+ r +
  EPX71614.1  34 VYVGNLSFYTTEEQIYTLFSKCGEVRRIIMGVDrFAKTPCGFCFVEYYKNEDALDCLKYISGTTLDERII 103
                 8****************************************************************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (178 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       330  (0.0184059); expected 358.6 (0.02)
Passed bias filter:                      284  (0.0158403); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1361.74
//
Query:       EPX71615.1  [L=471]
Description: NADPH-adrenodoxin reductase Arh1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.5e-11   42.0   0.0    3.3e-08   33.1   0.0    2.2  2  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
     0.0083   16.3   0.0      0.016   15.4   0.0    1.5  1  NAD_binding_8  NAD(P)-binding Rossmann-like domain
  ------ inclusion threshold ------
      0.021   14.8   0.0        0.1   12.6   0.0    2.1  2  NAD_binding_9  FAD-NAD(P)-binding
      0.085   11.9   0.0       0.46    9.5   0.0    2.1  3  Lycopene_cycl  Lycopene cyclase protein


Domain annotation for each model (and alignments):
>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.1   0.0   7.3e-12   3.3e-08       3     161 ..      21     177 ..      19     208 .. 0.69
   2 !    6.6   0.0   0.00085       3.8     211     278 ..     319     382 ..     297     394 .. 0.71

  Alignments for each domain:
  == domain 1  score: 33.1 bits;  conditional E-value: 7.3e-12
                  EEEE--SHHHHHHHHHHHHH..TS-EEEEETTHCHHHCSHHHHCHHHHHHHHHHHHHHHHHCHHHHCCCCHCCTCEEEEESCEEEEETEEECTCEEEE CS
                  xxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2   3 vvviGgGpAGlaaaltlaqa..gakvtlvelegtclnggcllskallgvaedaeiasevvkklnqgielllgeevvkidpgkkkvklekkkegdeeki 98 
                  v +iG+GpA++ +a++l ++  ++k+ ++ +    + +g + + ++   +e ++++++ ++  +++  ++lg    +i  gk ++ l      ++ + 
   EPX71615.1  21 VGIIGSGPAAFYTAHRLFRNdpSIKIDMY-EASP-VPFGLVRYGVAPDHPEVKQVEHKFTEIATSNQFRFLG----NICVGK-DIPL------STLSQ 105
                  569****************54599*****.4444.4455777788888888887776422222233334444....344444.4444......34457 PP

                  EESEEEE---EEE-BC.TCTTC.TTBEECCSECHHHHHHCCSS-T...........SEEEEES-SHHHHHHHHHH CS
                  xxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxx...........xxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2  99 aydklvlAtGssprdl.gipGvaenvgklvrtldsaealklkllp...........krivvvGgGyiGvElAaal 161
                   yd+lv A Gss+ +l +ipG+  +++++ r l           +           k++vv+G G++++++A  +
   EPX71615.1 106 HYDALVYAYGSSSDKLlNIPGEHLHGVYSARQLVGWYNSDP---RhqnvglslsrlKDLVVIGQGNVSLDIARIM 177
                  9*********8666666*****4444444344333332222...1233556777788*************99874 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.00085
                  ETTEEEEEEETTSCEEEESEEEE-S-EEES-HHCS.HCCT-EEEETTEEE--TTSBESSTTEEE-GGGC CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 211 gngeklevvledgeeidadlvvvavGvrpstelle.eklglelderggivvdeflrtnvpgiyaiGDva 278
                  +n++      ed  ei+a+ vv ++G++  +   + ++lg++ d ++g+  +  +    pg+y+ G v 
   EPX71615.1 319 RNES---NSSEDFVEIPAQAVVRSIGYKSVPIP-GmQELGIPFDTTRGVILNNDGHI-APGMYVSGWVK 382
                  2222...34455555************998744.57*******99999999999976.99999998666 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   3.6e-06     0.016       1      42 [.      23      66 ..      23      89 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 3.6e-06
                   EE--SHHHHHHHHHHHCC..TEEEEEE-SSSSSSGGG-EECETT CS
  NAD_binding_8  1 IvGaGlsGlvaAylLaka..gfdvlllekrdrlGGraasyevpg 42
                   I+G+G ++ ++A++L ++   ++++ +e+++ + G ++    p+
     EPX71615.1 23 IIGSGPAAFYTAHRLFRNdpSIKIDMYEASPVPFGLVRYGVAPD 66
                   9**************8876899**********999888777655 PP

>> NAD_binding_9  FAD-NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   2.3e-05       0.1       2      36 ..      23      54 ..      22      83 .. 0.88
   2 ?   -1.3   0.0      0.42   1.9e+03      40      78 ..     110     147 ..     102     169 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 2.3e-05
  NAD_binding_9  2 ivGaGprGlavlerLlarakkkspleitlfdpsep 36
                   i+G Gp++ +++ rL ++   + +++i++++ s+ 
     EPX71615.1 23 IIGSGPAAFYTAHRLFRN---DPSIKIDMYEASPV 54
                   9*****************...79********9876 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.42
  NAD_binding_9  40 rvwrtdqseelllNvpasemslftddpptfaeWlrerga 78 
                     v+    s+  llN+p ++++      ++++ W+++ + 
     EPX71615.1 110 LVYAYGSSSDKLLNIPGEHLHGVYS-ARQLVGWYNSDPR 147
                    5666677777788888888776654.5777777777664 PP

>> Lycopene_cycl  Lycopene cyclase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.0    0.0001      0.46       4      36 ..      23      55 ..      20      64 .. 0.91
   2 ?   -1.8   0.0      0.27   1.2e+03       1      16 [.     160     175 ..     160     183 .. 0.86
   3 ?   -2.1   0.0      0.33   1.5e+03     107     162 ..     305     367 ..     300     371 .. 0.63

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0001
  Lycopene_cycl  4 viGaGpAglslAarlteakpglkvvlieaspsl 36
                   +iG+GpA    A+rl ++ p +k+ + easp +
     EPX71615.1 23 IIGSGPAAFYTAHRLFRNDPSIKIDMYEASPVP 55
                   9****************************9976 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.27
  Lycopene_cycl   1 DvvviGaGpAglslAa 16 
                    D+vviG G   l +A 
     EPX71615.1 160 DLVVIGQGNVSLDIAR 175
                    9***********9997 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 0.33
  Lycopene_cycl 107 akvesveeeea...geslvvleggrkirarlvvdarglaslk....karrlglQtfyGvevev 162
                    ++ve+v+ ++     + +   e+ ++i+a++vv + g  s +    +++ + + t +Gv ++ 
     EPX71615.1 305 GQVEKVRFQKTetiRNESNSSEDFVEIPAQAVVRSIGYKSVPipgmQELGIPFDTTRGVILNN 367
                    55666654444211233345566679*******999977666776666666677777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (471 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       394  (0.0219756); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3277.83
//
Query:       EPX71616.1  [L=117]
Description: hypothetical protein SOCG_06137 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       591  (0.0329634); expected 358.6 (0.02)
Passed bias filter:                      302  (0.0168442); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.28s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 818.82
//
Query:       EPX71617.1  [L=446]
Description: CCAAT-binding factor complex subunit Php5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      3e-16   59.4   0.3    4.6e-16   58.8   0.3    1.3  1  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a
    2.6e-13   50.5   0.4    4.7e-13   49.6   0.4    1.4  1  Histone        Core histone H2A/H2B/H3/H4


Domain annotation for each model (and alignments):
>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.8   0.3   5.2e-20   4.6e-16       2      65 .]     116     181 ..     115     181 .. 0.95

  Alignments for each domain:
  == domain 1  score: 58.8 bits;  conditional E-value: 5.2e-20
                    XXXHHHHHHHHHCCTTXS-..B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHHH CS
  CBFD_NFYB_HMF   2 eLPiarvkkImksdpdark..iakdAkeliaecveefieelaseAaeickkekrKtikaehiklAv 65 
                     LP+ar+kk+mk d+++r+  i+ +A++l+a+  e f++el+ +A+ ++kk++r+t+++ +i+ A+
     EPX71617.1 116 HLPLARIKKVMKTDEEVRNkmISAEAPFLFAKGSEIFVTELTMRAWLLAKKNQRRTLQRSDIANAI 181
                    59************8888779*****************************************9986 PP

>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.6   0.4   5.3e-17   4.7e-13      59     128 ..     111     181 ..      95     184 .. 0.90

  Alignments for each domain:
  == domain 1  score: 49.6 bits;  conditional E-value: 5.3e-17
                 SXXSXHHHHHHHHHHHH...TTSSSXEEXHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTXSEEXHHHHHHHH CS
     Histone  59 dlliqklpfaRvvreivk..sekedlrisaeavlalqealEallvelfeeAnllakhaKRvTitpkDiqlAr 128
                 + ++  lp aR +++++k  +e+ +++isaea+ ++++ +E + +el+++A+llak++ R+T+++ Di  A+
  EPX71617.1 111 AIKTLHLPLAR-IKKVMKtdEEVRNKMISAEAPFLFAKGSEIFVTELTMRAWLLAKKNQRRTLQRSDIANAI 181
                 4577889****.******9999**********************************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (446 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       587  (0.0327403); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 3237.40
//
Query:       EPX71618.1  [L=450]
Description: saccharopine dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.3e-90  302.8   0.0    6.5e-90  301.8   0.0    1.5  1  Sacchrp_dh_C     Saccharopine dehydrogenase C-terminal domain
      5e-26   91.5   0.3    7.8e-26   90.9   0.3    1.3  1  Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding doma
      6e-05   23.1   0.0    0.00011   22.3   0.0    1.4  1  Shikimate_DH     Shikimate / quinate 5-dehydrogenase
    6.5e-05   22.9   0.1    0.00012   22.0   0.1    1.5  1  NAD_binding_10   NAD(P)H-binding
  ------ inclusion threshold ------
      0.012   14.6   0.1      0.019   13.9   0.1    1.3  1  OCD_Mu_crystall  Ornithine cyclodeaminase/mu-crystallin famil
       0.06   13.2   0.2       0.11   12.4   0.2    1.4  1  DUF2100          Uncharacterized protein conserved in archaea
       0.11   13.4   0.1       0.21   12.4   0.1    1.5  1  GFO_IDH_MocA     Oxidoreductase family, NAD-binding Rossmann 
       0.15   12.8   0.1       0.28   11.9   0.1    1.5  1  NAD_binding_3    Homoserine dehydrogenase, NAD binding domain


Domain annotation for each model (and alignments):
>> Sacchrp_dh_C  Saccharopine dehydrogenase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  301.8   0.0   2.9e-93   6.5e-90       1     265 []     123     440 ..     123     440 .. 0.94

  Alignments for each domain:
  == domain 1  score: 301.8 bits;  conditional E-value: 2.9e-93
                   BTTTBHHHHHHHHHHHCCCHTTBECCCCCCCCCCCCECCCCESTTCEEESS-HHHHHHHCCSEEEEEETTEEEECTCCCSGCC.TCEEECCCCCEEC CS
  Sacchrp_dh_C   1 GldPGidhllamkaidevkakggkiesflsycgglpapeasdnplgYkfsWspegvlreltnpakvlengqvkevpgsellkgakkpiyilpglsle 97 
                   G+dPG+dhl+a+k+i+ev+++ggki+sf+sycgglpape s+nplgYkfsWs +gvl++l+n+ak++e+g++++++g++l+++a kp++i+pg++++
    EPX71618.1 123 GVDPGVDHLYAIKTIEEVHNEGGKIKSFVSYCGGLPAPEDSNNPLGYKFSWSSRGVLLALRNSAKFYEGGKIVNIEGKDLMETA-KPYFIYPGYAFV 218
                   9********************************************************************************977.89999******* PP

                   TTECEEECTHCHHHHHHC.SCSEEEEEEEEEHHHHHHHHHHHTTT--SCEC..C........................................... CS
  Sacchrp_dh_C  98 gypnrdslpyeelyglpeaktlfrgtlrypgfsellkslkelGllseepke..e........................................... 149
                   +ypnrds+ ++e y++pea+t++rgtlry+gf+e+++ l++lG+l+++p e  +                                           
    EPX71618.1 219 CYPNRDSTVFKERYQIPEAETIIRGTLRYQGFPEFIHCLVDLGFLEDTPREylDpkgtalpwkevtarvinaasssesdlvkaissahqfkdsddkk 315
                   ************************************************944464889**************************99999999999999 PP

                   .CCCC..HH...S.T..T.C.EHHHHHHHHCCHHCCCCTTEEEEEEEEEEEEEE.TTSEEEEEEEEEEEEE.EHHSSSHHHHHHHHHHHHHHHHHHT CS
  Sacchrp_dh_C 150 .alka..wl...s.e..g.e.spldvlaalLekklalepgerDlvvlqhefgie.sdgkkkekktstlvgy.deegssamaktvGvpaaiaaklild 233
                    ++++  wl   s +  +   +pld+l+a+Le+ +++e+gerD+ +lqh+f++e ++gk  +++t+tl++y  + g+++mak vG+p++ia ++ild
    EPX71618.1 316 rIINGlkWLgmfSeKtvTpRgNPLDTLCATLEELMQYEEGERDMLILQHKFEVEtKEGKL-QTRTCTLLDYgVPGGYTSMAKLVGIPCGIASQQILD 411
                   9666777888773244524468********************************999998.9999****996467********************** PP

                   TSCTSSEEEEGGGS.CHHHHHHHHHHHHHCT- CS
  Sacchrp_dh_C 234 gkikkrGvvtpeelvdpeiyeplleeLekeGi 265
                   g i+++Gv++p+++   +++ pl++eL+keGi
    EPX71618.1 412 GVINTPGVLAPNDM---KLCAPLIDELAKEGI 440
                   ***********777...89***********98 PP

>> Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.9   0.3   3.5e-29   7.8e-26       1     130 []       4     119 ..       4     119 .. 0.98

  Alignments for each domain:
  == domain 1  score: 90.9 bits;  conditional E-value: 3.5e-29
                      EEEE--SHHHHHHHHHHHCTCCT-GEEEEEESSHHHHHHHHCHHTTTCEEEEE--TTTHHHHHHHHHTTSSEEEE-SSGGGHHHHHHHHHHHT- CS
  Sacchrp_dh_NADP   1 vliiGaGsvGqavaellarhfdvdaeitvadrskeklealaakalgvrfeaialdaenyeavLaallkegdlvvnlsppissldvlkaCietgv 94 
                      vl++G+G+v+ +++e+la+++     +tva+r+++k+eal++    ++ +aiald+++++a L+++++e+dl ++l+p++++++v+ka+i++g 
       EPX71618.1   4 VLLLGSGFVALPTLEYLAQRKGN--AVTVACRTLSKAEALIK--GVPNSKAIALDVADEAA-LEKAVSEHDLTISLIPYTYHATVMKAAIKHGK 92 
                      79*******************99..9**************97..7899*************.******************************** PP

                      EEEESS-BCGCCSCHCCSHHHHHTHHHHHHCTSEEE CS
  Sacchrp_dh_NADP  95 hyvdtsiskeertnyalreavlklkekakeagvtav 130
                      h+ +ts+         +++ + +l+e ak+ag +++
       EPX71618.1  93 HVCTTSY---------VNPHMAELEESAKKAGSICM 119
                      *******.........****************9986 PP

>> Shikimate_DH  Shikimate / quinate 5-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   4.7e-08   0.00011      14      81 ..       3      73 ..       1      96 [. 0.85

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 4.7e-08
                  EEEEES-SHHHHHHHHHHHCCT-CEEEEEESSHHHHHHHHHHHT.ET-EEEEGCG...HHHHHHT-SEEEE CS
  Shikimate_DH 14 kvlliGaGemaelvakhLlakgvkkvvvaNRtlerakelaeelkgeeiealklee...lkellaeadvvis 81
                   vll+G G +a  ++++L++++ ++v+va Rtl++a++l + + + ++ al++ +   l+++++e d+ is
    EPX71618.1  3 SVLLLGSGFVALPTLEYLAQRKGNAVTVACRTLSKAEALIKGVPNSKAIALDVADeaaLEKAVSEHDLTIS 73
                  59*****************************************8887777777544448888888888887 PP

>> NAD_binding_10  NAD(P)H-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.1   5.3e-08   0.00012       2      68 ..       8      75 ..       8     142 .. 0.80

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 5.3e-08
                    TTSHHHHHHHHHHHHC-T-EEEEEETTHHHCHHHHCT.TTCEEEE--TT-CCHHHHHHTT-SEEEES- CS
  NAD_binding_10  2 AtGkvGrllvkellargghevtalvRnpeklaeleae.eglevvegdvtdvedlaealkgadaVvsal 68
                    ++G v+   ++ l++r+g +vt+  R+ +k+++l +  ++ +++ +dv d+++l++a++ +d  +s +
      EPX71618.1  8 GSGFVALPTLEYLAQRKGNAVTVACRTLSKAEALIKGvPNSKAIALDVADEAALEKAVSEHDLTISLI 75
                    68999***************************998555************************988877 PP

>> OCD_Mu_crystall  Ornithine cyclodeaminase/mu-crystallin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.1   8.6e-06     0.019     134     243 ..       6     118 ..       3     123 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 8.6e-06
                      EE--SHHHHHHHHHHCCCS--SEEEEE-SSHHHHHHHHHHCCS..CTT-EEECSC..HHHHTTSSEEEE----SS.-SB-GGGS-TT-EEEE-S CS
  OCD_Mu_crystall 134 iiGaGvqaetqlealkavldikevriydrdeeaaekfaenlqe.fefevsackse..eeavegadivvtvTaaka.pilkaewvkpGahinavg 223
                      ++G G  a   le l a+++ + v + +r+ ++ae++++ + +   ++  +++++  e+av++ d  +   + +    +++  +k G h++   
       EPX71618.1   6 LLGSGFVALPTLEYL-AQRKGNAVTVACRTLSKAEALIKGVPNsKAIALDVADEAalEKAVSEHDLTISLIPYTYhATVMKAAIKHGKHVCTTS 98 
                      567777777666655.56677999***************99986677777777653389**********99977668999999*********** PP

                      --STT--SB-HHHHHCCEEE CS
  OCD_Mu_crystall 224 adapgkteLdddilkradif 243
                         p+ +eL++ + k   i 
       EPX71618.1  99 YVNPHMAELEESAKKAGSIC 118
                      **********9998877665 PP

>> DUF2100  Uncharacterized protein conserved in archaea (DUF2100)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.2   4.7e-05      0.11     134     163 ..     413     442 ..     407     450 .] 0.88

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 4.7e-05
                 EEEXSSXSSSHHHHTT..XXXSTTTTTSHH CS
     DUF2100 134 iisteGvLeieDmkeiNPkipekalkgieK 163
                 +i t GvL+++Dmk   P i e a +gi+ 
  EPX71618.1 413 VINTPGVLAPNDMKLCAPLIDELAKEGIVI 442
                 699************************975 PP

>> GFO_IDH_MocA  Oxidoreductase family, NAD-binding Rossmann fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   9.5e-05      0.21       3      91 ..       4      96 ..       3     119 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 9.5e-05
                  EEEETTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHH......HHHTTHE.EESS...HHHHHTCTTESEEEE-S-GGGHHHHHHHHHHTT-EEEE CS
  GFO_IDH_MocA  3 vaiiGaGkigskhlrplnesqrleevvalldpdaeraeav......aesfgve.aysd...leelladpeidavivatpngtheelakaaleagkhvll 91
                  v++ G+G+++ + l+ l ++ ++  v+ +  +  ++aea+      +    ++  ++d   le+ ++  e d+ i  +p + h+ ++kaa+++gkhv+ 
    EPX71618.1  4 VLLLGSGFVALPTLEYLAQR-KGNAVT-VACRTLSKAEALikgvpnS--KAIAlDVADeaaLEKAVS--EHDLTISLIPYTYHATVMKAAIKHGKHVCT 96
                  67889999999999666666.454454.4555555677776888553..333333333122555555..89999999999*****************86 PP

>> NAD_binding_3  Homoserine dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   0.00012      0.28       1      91 [.       8      99 ..       8     119 .. 0.69

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00012
                   --SHHHHHHHHHHHH---SSEEEEEEEEESS.EEE-TT......HHHHHT--CB---HHHHHHHHS-EEEEE-S--HHHHTTHHHHHHTTEEEE-S-- CS
  NAD_binding_3  1 GlGaiGsavleqlkrqqseielelvavadrd.sllskd......rkallasealtldlddliahldpdvvVEcasseavaelvlkaLkagkdvvtank 91
                   G G ++  +le l++ + +     v va r  s++++        ka + + a  + l++ ++  + d+ + + ++++ a ++ +a+k+gk+v t + 
     EPX71618.1  8 GSGFVALPTLEYLAQRKGN----AVTVACRTlSKAEALikgvpnSKAIALDVADEAALEKAVS--EHDLTISLIPYTYHATVMKAAIKHGKHVCTTSY 99
                   6788888888888888875....4444444433333334444455555666666667777777..9****************************9984 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (450 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       429  (0.0239277); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 3198.87
//
Query:       EPX71619.1  [L=81]
Description: hypothetical protein SOCG_06140 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       591  (0.0329634); expected 358.6 (0.02)
Passed bias filter:                      349  (0.0194657); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.27s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 602.20
//
Query:       EPX71620.1  [L=857]
Description: membrane transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.1e-38  131.7   1.5    9.1e-23   81.8   0.1    2.1  2  SPX             SPX domain
    2.9e-28   99.2  36.6    3.6e-28   98.8  36.6    1.1  1  Na_sulph_symp   Sodium:sulfate symporter transmembrane region
    4.3e-25   88.5  45.3    2.9e-20   72.7  11.0    2.8  3  CitMHS          Citrate transporter
     0.0021   18.4   3.1     0.0049   17.2   3.1    1.5  1  CENP-B_dimeris  Centromere protein B dimerisation domain
  ------ inclusion threshold ------
        0.2   11.9  13.9        6.9    7.0   6.6    3.6  2  Gate            Nucleoside recognition
        0.3   10.3   1.8       0.45    9.7   1.8    1.2  1  SLAIN           SLAIN motif-containing family
       0.41    9.1   3.6       0.59    8.6   3.6    1.1  1  UPF0560         Uncharacterised protein family UPF0560
       0.52    9.8   5.3       0.99    8.9   5.3    1.4  1  PPP4R2          PPP4R2
       0.58    9.8   2.9        1.1    8.9   2.9    1.4  1  FAM176          FAM176 family
       0.98    9.1   4.8        1.5    8.5   4.8    1.2  1  Cwf_Cwc_15      Cwf15/Cwc15 cell cycle control protein
          1    8.6   4.6        1.5    8.0   4.6    1.1  1  NOA36           NOA36 protein
        8.6    4.3   7.3         14    3.6   7.3    1.2  1  DNA_pol_phi     DNA polymerase phi


Domain annotation for each model (and alignments):
>> SPX  SPX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.0   0.1   2.7e-16   4.1e-13       1      37 [.       1      37 [.       1      59 [. 0.87
   2 !   81.8   0.1   6.1e-26   9.1e-23     181     382 ..      52     283 ..      38     285 .. 0.61

  Alignments for each domain:
  == domain 1  score: 50.0 bits;  conditional E-value: 2.7e-16
         SPX  1 MKFakeLeenlvpEWrdaYldYkqLKKlIkkvqrele 37
                MKF+++L++n+vpEW + Y+ Y+ LKKlI+++++e+ 
  EPX71620.1  1 MKFSHSLQFNAVPEWSESYIAYSNLKKLIYALEHEQI 37
                *********************************9765 PP

  == domain 2  score: 81.8 bits;  conditional E-value: 6.1e-26
         SPX 181 r......aekeFferLdseLnkvetFykakeeefterlesLrkqleal.rp............rrikeaeerksdlyrwre.................. 242
                 +      +++ F + Ld+eL+ + +Fy+ ke+e  e +  L+ + ++   +                            r+                  
  EPX71620.1  52 NhqiqslPDDRFRSSLDKELDGIVNFYSPKEREIEETFGKLNVEYDNYaLEygfgkqgssgdgT---------------RSairpkkdsknirhlrdst 135
                 356666799***************************************8885544444444331...............33334444444422234444 PP

         SPX 243 .....ifglksveaqvfessreldrgelse....eardkevseelekngwikptksklekkr.........neralekvkpektlkafldsvrrdylrk 323
                      + +   +++q+  +    + g+l++    ++++++   ++e+++++ +        +         +e++ +++  e++ ++++ +++   + +
  EPX71620.1 136 isqevPTSTA-SDHQIYVNGATGSDGNLNNpppvSRVESTAILKSEHSNSALQ--------KdvsvgtpedDEEDDDEE--EDDEEEDTAEHHHLLVEQ 223
                 4444433333.444554444444444444455442222222222222222222........233342311233333333..444444444444444444 PP

         SPX 324 enrvklkkakk..klkkafvelYrgLelLKsYqeLNrtAFrKIlKKfDKvtaltaskrymk 382
                      + + ++   lk+++ +lY++  +L sY  LN t+F+KIlKK+DK+++  +++ ym 
  EPX71620.1 224 -YPSDIMAYENfvSLKRKITQLYISIHDLMSYVQLNWTGFSKILKKYDKTLGSSLREPYMR 283
                 .5555555555557**********************************************7 PP

>> Na_sulph_symp  Sodium:sulfate symporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.8  36.6   2.4e-31   3.6e-28       7     469 ..     398     855 ..     393     857 .] 0.88

  Alignments for each domain:
  == domain 1  score: 98.8 bits;  conditional E-value: 2.4e-31
  Na_sulph_symp   7 lllllvvlliilllPapdgleskawrllaifiaaivglileplplavialialsllavligvla........akalsevlsgfssdttlLvfaall 94 
                    l +++++ l i++l  p   ++++  ++a ++++ + + +e++pl v++++    +a l +  a        +++++ + +   + t++L++++++
     EPX71620.1 398 LTIIVIFSLFIAILMYPMIDNTEQNNCMALLVLVSLLWATEAVPLFVTSFLVPFFTAFLRILRAedgsplpgKESTKVIFASMWNPTIVLLLGGFT 493
                    55667777888888888888888999***********************998888888888877999****99999******************** PP

  Na_sulph_symp  95 iaaavektgLgkRiAlvlvkivGkrt..liLgyalvladlllapatpsntAraggivfpvikslssafgsepekqserkigaylmltvvqsasits 188
                    iaaa+ k  + kR+A  ++   G+++    L  ++v+++ ++++++ ++     +i+ p +++l++   s+         +++l++ ++ ++ i++
     EPX71620.1 494 IAAALSKYQIAKRLATSILARAGQKPrnVLLMNMIVAMFASMWISNVAAPILCFSIIQPLLRNLPAE--SD--------YAKILLIGIALASNIGG 579
                    **************************65566778999999********9999999999999999852..22........45699************ PP

  Na_sulph_symp 189 iaflTamApNllllglinsilgveitwasWflaaiptgvillllvplllyvlyppeikkkeeakavaktelkelGpltarekallilfvlllllWi 284
                    +a   a  +N+++l+ ++   g    w++Wf + ip+  +++l v+ +l  l+++   +   + a ++        +t+ +  ++ + +  ++lW 
     EPX71620.1 580 MASPIASPQNIIALQNMDPSPG----WGEWFAVSIPVCTVCVLGVWVFL--LFLSSSSER-VVLAKIRP---SRDKFTKTQSFISFVTIATIILWC 665
                    ******************8776....**************999988777..777766555.22223333...33569******************* PP

  Na_sulph_symp 285 fgesln...idattvaivvlvillllrvldWkDivkqktaWntllllgglialakllersgliewlgnklttslsglspavaiiiilslfvlvhyl 377
                     +  ++    d +++a++ +++ + + +l+ +D   ++  W +++l  g++al k  + sgl+e ++  + + +s    +  ++ ++sl+ lv   
     EPX71620.1 666 LERRYDeifGDMGVIALIPIIVFFGTGLLTKEDF--NNFLWTVIVLAMGGVALGKTVSSSGLLELIALNIGNAVS-SLDTFKVLLVFSLLTLVVAT 758
                    ***888875799********************76..7799*******************************9999.56677888888999999999 PP

  Na_sulph_symp 378 faSatAttaallpillavaqaipgappllvalllalatslagfllpyatgpnpiv......fgagylkvkdywrlGfilsiigllillllgalwwk 467
                    f S      ++lp++  v+  ++   p +++++++l  s+a + lp ++ pn+ +       g  ylkv d+ ++G++ ++i+++ ll++g++  +
     EPX71620.1 759 FVSHMVAAMIVLPVIHEVGSRLSDPHPRIFVMACGLMCSIA-MALPTSGFPNMTAimmeneMGKRYLKVTDFLKAGIPATLISFTALLIVGTSIMR 853
                    999999999*************997799999**********.*********98652234445889**************************98777 PP

  Na_sulph_symp 468 lL 469
                    +L
     EPX71620.1 854 VL 855
                    76 PP

>> CitMHS  Citrate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.6      0.56   8.4e+02     133     168 ..     383     413 ..     370     431 .. 0.69
   2 !   72.7  11.0   1.9e-23   2.9e-20       2     166 ..     433     626 ..     432     663 .. 0.83
   3 !   26.2  20.2   2.8e-09   4.3e-06       3     160 ..     663     848 ..     661     856 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.56
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      CitMHS 133 iGtpttraaarpglslpnllllalllvgllplvllf 168
                 +G++     ++p+ +l   ll+++++  l++ +l++
  EPX71620.1 383 FGDV-----KIPRFFLSSTLLTIIVIFSLFIAILMY 413
                 5555.....666666666777777777777777766 PP

  == domain 2  score: 72.7 bits;  conditional E-value: 1.9e-23
                 xxxxxxxxxxxxxxxxxxxxx....xxxxxx............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxx RF
      CitMHS   2 vllileklrldvvallvlvll....vltiee............alsgiaspiillllgamiigaaleetGlfdrlaakllrlaggkrd.llvllvllta 83 
                 +l+++e+++l v+++lv   +    +l  e+            +++ + +p+i+lllg+++i+aal++  +++rla+ +l +ag k++ +l++ +++++
  EPX71620.1 433 LLWATEAVPLFVTSFLVPFFTaflrILRAEDgsplpgkestkvIFASMWNPTIVLLLGGFTIAAALSKYQIAKRLATSILARAGQKPRnVLLMNMIVAM 531
                 68999999******98888889888555555666777778888******************************************************** PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.................xxxxxxxx. RF
      CitMHS  84 llsafvsndgvvlimipivlslakrlkklppl...lliplalaaniggaltpiGtpttraaarpglslpnlll.................lalllvgl. 161
                 + s+++sn+++ +++ +i+ +l + l   + +   lli +ala+nigg+++pi  p            +n+++                 ++++ v++ 
  EPX71620.1 532 FASMWISNVAAPILCFSIIQPLLRNLPAESDYakiLLIGIALASNIGGMASPIASP------------QNIIAlqnmdpspgwgewfavsIPVCTVCVl 618
                 ***********999999999999987777777999*********************............***9999999999999999999444444332 PP

                 ...xxxxx RF
      CitMHS 162 ...lplvl 166
                    ++l++
  EPX71620.1 619 gvwVFLLF 626
                 21122222 PP

  == domain 3  score: 26.2 bits;  conditional E-value: 2.8e-09
                 xxxxxx......xxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxx RF
      CitMHS   3 llilek......lrldvvallvlvll....vltieealsgiaspiillllgamiigaaleetGlfdrlaakllrlaggkrd..llvllvlltallsafv 89 
                 l+ le+       ++ v+al++++++    +lt e+ ++ + +++i+l +g++ +g+ ++++Gl + +a  + +++ +  +  +l++++llt +++ fv
  EPX71620.1 663 LWCLERrydeifGDMGVIALIPIIVFfgtgLLTKED-FNNFLWTVIVLAMGGVALGKTVSSSGLLELIALNIGNAVSSLDTfkVLLVFSLLTLVVATFV 760
                 555555555555678899**9999999996666666.************************************99999888756666************ PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.............................xxxxx RF
      CitMHS  90 sndgvvlimipivlslakrlkklppl.lliplalaaniggaltpiGtpttraaarpglslpnlll.............................lalll 158
                 s  ++++i++p++ +++ rl++  p+ ++++ +l+++i   ++p  +             pn+ +                             +all+
  EPX71620.1 761 SHMVAAMIVLPVIHEVGSRLSDPHPRiFVMACGLMCSIAM-ALPTSGF------------PNMTAimmenemgkrylkvtdflkagipatlisfTALLI 846
                 *******************99988889***********98.6666666............566554445555555555555555443222223344444 PP

                 xx RF
      CitMHS 159 vg 160
                 vg
  EPX71620.1 847 VG 848
                 43 PP

>> CENP-B_dimeris  Centromere protein B dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   3.1   3.3e-06    0.0049      16      65 ..     194     246 ..     183     259 .. 0.70

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 3.3e-06
  CENP-B_dimeris  16 sdeeeeeeeedeededeeddedddevpvpsf.geamay..famvkryltsfpi 65 
                     + e++ee++++eed++eed  +   + v  +  + may  f  +kr +t + i
      EPX71620.1 194 TPEDDEEDDDEEEDDEEEDTAEHHHLLVEQYpSDIMAYenFVSLKRKITQLYI 246
                     44556666666666666777777888888773578888557778999998765 PP

>> Gate  Nucleoside recognition
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.7    0.0049       7.4       3      69 ..     396     506 ..     394     594 .. 0.60
   2 ?    7.0   6.6    0.0046       6.9       5     104 ..     653     765 ..     650     814 .. 0.85

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0049
        Gate   3 kagpiillasiliwflss..................................................ssllgrigkllepvfaplgqeldwkatvsll 51 
                 ++++ii+++s++i +l +                                                                      +l++k ++  +
  EPX71620.1 396 TLLTIIVIFSLFIAILMYpmidnteqnncmallvlvsllwateavplfvtsflvpfftaflrilraedG------------------SPLPGKESTKVI 476
                 5799************99999999999999999999999999999977754444444444444444440..................455555444444 PP

        Gate  52 tgfaakevvvgtlgtly............t 69 
                 +  + + ++v +lg +             +
  EPX71620.1 477 FASMWNPTIVLLLGGFTiaaalskyqiakR 506
                 444444444444444333333334344432 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0046
        Gate   5 gpiillasiliwflss...........ssllgrigkllepvfaplg.qeldwkatvslltgfa.akevvvgtlgtlytsalgellqgfdtpksalafll 90 
                 + ++ +a+i++w l+              l+ +i ++ + ++ + + +++ w ++v  + g+a  k+v  + l +l + + g++ ++ dt+k  l+f l
  EPX71620.1 653 ISFVTIATIILWCLERrydeifgdmgvIALIPIIVFFGTGLLTKEDfNNFLWTVIVLAMGGVAlGKTVSSSGLLELIALNIGNAVSSLDTFKVLLVFSL 751
                 678999********999*******9999999999999999*99966789************************99999999999999999999887777 PP

        Gate  91 fvllytpcvatlav 104
                 ++l     v+ +++
  EPX71620.1 752 LTLVVATFVSHMVA 765
                 66666644444433 PP

>> SLAIN  SLAIN motif-containing family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   1.8    0.0003      0.45     154     210 ..     173     227 ..     169     242 .. 0.75

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.0003
       SLAIN 154 stsasasrrsssaSlqslrrgtlsdqeldaysledeeeeydslpqprltrfsplqrg 210
                 st+ + s +s sa  + +  gt  d e+d+++ ed+eee +   ++ l    p  ++
  EPX71620.1 173 STAILKSEHSNSALQKDVSVGTPEDDEEDDDEEEDDEEEDTAEHHHLLVEQYP--SD 227
                 88889999999998899999*********999888888777666665555444..44 PP

>> UPF0560  Uncharacterised protein family UPF0560
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   3.6   0.00039      0.59     769     803 ..     177     212 ..     130     215 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00039
     UPF0560 769 srseespseserd.sltspeddsededdaedDqeen 803
                  +se+s+s  ++d s+ +pedd+ed+d++edD+ee+
  EPX71620.1 177 LKSEHSNSALQKDvSVGTPEDDEEDDDEEEDDEEED 212
                 45678999988888******************9998 PP

>> PPP4R2  PPP4R2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   5.3   0.00066      0.99     182     269 ..     123     213 ..      64     223 .. 0.63

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00066
      PPP4R2 182 vslvsipwvdekteselspfikeidsimsvnlgfedeeekeeddneseesaseseeiteekdesvkvee......kdddeeddeedtdyveeee 269
                     +i  ++++t s++ p+++  d  + vn ++ ++ + ++     ++s  es+ i +++ +++ +++      ++ddeedd+e++d +ee++
  EPX71620.1 123 KDSKNIRHLRDSTISQEVPTSTASDHQIYVNGATGSDGNLNNPP---PVSRVESTAILKSEHSNSALQKdvsvgtPEDDEEDDDEEEDDEEEDT 213
                 44567888999999999999999999999998888888776633...44444555555555555555554433333333333333333222222 PP

>> FAM176  FAM176 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   2.9   0.00074       1.1      55      92 ..     181     218 ..     168     243 .. 0.49

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00074
      FAM176  55 kkkkkklkeesekasededeeeeeeeedsseseaeeel 92 
                 + +   +k+ s  + ed++e+++eee+d++e++ae++ 
  EPX71620.1 181 HSNSALQKDVSVGTPEDDEEDDDEEEDDEEEDTAEHHH 218
                 33333334444444444444444444444444444333 PP

>> Cwf_Cwc_15  Cwf15/Cwc15 cell cycle control protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   4.8   0.00098       1.5     119     148 ..     186     215 ..     114     222 .. 0.68

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00098
                 --------.....---------------------- CS
  Cwf_Cwc_15 119 eeeeeeee.....eesdddsdsdsdddddedetae 148
                  +     +     + +dd++d+d+++dd+e++tae
  EPX71620.1 186 LQ-----KdvsvgTPEDDEEDDDEEEDDEEEDTAE 215
                 12.....0233446677777777777777777776 PP

>> NOA36  NOA36 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   4.6     0.001       1.5     273     297 ..     194     213 ..     132     222 .. 0.57

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.001
       NOA36 273 gdedddddddeedddeeeddedeee 297
                 + edd++d     ddeeedde+e+ 
  EPX71620.1 194 TPEDDEED-----DDEEEDDEEEDT 213
                 11222222.....222222222222 PP

>> DNA_pol_phi  DNA polymerase phi
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   7.3    0.0093        14     625     662 ..     177     215 ..     174     230 .. 0.60

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.0093
  DNA_pol_phi 625 Learen.kegqaelfedededeeddeeeeeeddeededs 662
                  L+++ +  + q+++  ++ ed+e+d++eee+d+eed+ +
   EPX71620.1 177 LKSEHSnSALQKDVSVGTPEDDEEDDDEEEDDEEEDTAE 215
                  555543355666666555555555555555555555443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (857 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1492  (0.0832171); expected 358.6 (0.02)
Passed bias filter:                      816  (0.0455129); expected 358.6 (0.02)
Passed Vit filter:                        98  (0.005466); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.92u 0.33s 00:00:01.25 Elapsed: 00:00:00.49
# Mc/sec: 5213.66
//
Query:       EPX71621.1  [L=435]
Description: diphthamide biosynthesis protein Dph1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   3.1e-118  394.7   0.0   3.7e-118  394.4   0.0    1.1  1  Diphthamide_syn  Putative diphthamide synthesis protein
  ------ inclusion threshold ------
       0.12   12.4   0.0       0.46   10.5   0.0    2.0  2  Ribonuc_L-PSP    Endoribonuclease L-PSP


Domain annotation for each model (and alignments):
>> Diphthamide_syn  Putative diphthamide synthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  394.4   0.0  4.1e-122  3.7e-118       1     303 []      93     400 ..      93     400 .. 0.97

  Alignments for each domain:
  == domain 1  score: 394.4 bits;  conditional E-value: 4.1e-122
  Diphthamide_syn   1 fPegllpdsaeiadileef.gaevvilgDttYGaCcvdevaaehlgadllvHyGhsclspvd..rlpvlYvfveieldvehlvetlkknfkekk 91 
                      +Pegll++ + ++di+e+f ++e++i+gD+tYGaCc+d+++a++lg+d+lvHyGhscl+pvd   ++vlYvfv+i++d+ h++ +lk+n+++k+
       EPX71621.1  93 LPEGLLMFGCILSDIFEQFcQVETIIMGDVTYGACCIDDFTARALGCDFLVHYGHSCLVPVDqtPIKVLYVFVDIKVDLGHIIGSLKQNLPSKS 186
                      6***************8887*****************************************9999*************************99** PP

  Diphthamide_syn  92 kivlvstiqyahaleevkeeleee......gyevvkvpqsekplspgevlgctspklkeeeeevdailyigdgrfhllslmlsnpklpvyrydp 179
                      k++lv+tiq++ +l+++keele+       g+  v +pq+ kplspge lgctsp ++   + vda++yigdgrfhl+s+m++np lp+yrydp
       EPX71621.1 187 KLALVGTIQFVGSLNTIKEELEKVeedgkgGFYSV-IPQA-KPLSPGEALGCTSPYID--RNVVDAVVYIGDGRFHLESVMIANPGLPAYRYDP 276
                      **********************5477888877666.7999.****************8..569******************************* PP

  Diphthamide_syn 180 yskklteesydakkllrrRyaaiekakdakkvGiivgtlgvqgrlelverlkkllkeagkksylvlvgelnpakLanfaeidafVlvaCprlsi 273
                      ys  lt esy ++++ ++R +aieka++akk+G+i gtlg+qg+++++++lk+ l++++k++++vl++e++p++La+f+++da+V+vaCprlsi
       EPX71621.1 277 YSHVLTIESYAHEEMKEIRHSAIEKARSAKKFGLIQGTLGRQGSPKVLDNLKETLRKSKKEFVTVLMSEIFPDRLAQFTDVDAWVQVACPRLSI 370
                      ********************************************************************************************** PP

  Diphthamide_syn 274 ddgkeFekPvltpyElevalgerewteeyv 303
                      d+g++F+ P+ltpyE+ va+++  w+e y+
       EPX71621.1 371 DWGYAFPAPLLTPYEASVAFQAAPWREVYP 400
                      *************************99886 PP

>> Ribonuc_L-PSP  Endoribonuclease L-PSP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0      0.63   5.6e+03     104     116 ..      63      75 ..      61      78 .. 0.86
   2 ?   10.5   0.0   5.1e-05      0.46      43      87 ..     318     362 ..     302     381 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 0.63
                    -SBSGGG-SEEEE CS
  Ribonuc_L-PSP 104 VaaLpkgakvEIe 116
                    V+ Lp+++++E+ 
     EPX71621.1  63 VKLLPQNYNFEVH 75 
                    999********96 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 5.1e-05
                    HHHHHHHHHHHHHHHHTT--GGGEEEEEEEESSGGGHHHHHHHHH CS
  Ribonuc_L-PSP  43 eqtrqalenlkavLaaagaslsdvVkvtvFladiedfaevnevya 87 
                    ++  ++l+nlk++L+++  ++  v++ ++F   +++f++v++ ++
     EPX71621.1 318 QGSPKVLDNLKETLRKSKKEFVTVLMSEIFPDRLAQFTDVDAWVQ 362
                    55678**********************************987655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (435 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       392  (0.021864); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 3037.24
//
Query:       EPX71622.1  [L=510]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   6.3e-108  360.2  12.5   1.5e-107  358.9   8.5    2.1  2  Ytp1      Protein of unknown function (Ytp1)
    1.5e-25   89.0  11.2    1.5e-25   89.0  11.2    2.5  3  DUF2427   Domain of unknown function (DUF2427)
     0.0097   15.7   3.0      0.084   12.7   0.1    3.3  2  DUF2157   Predicted membrane protein (DUF2157)
  ------ inclusion threshold ------
       0.35   10.5   1.7       0.41   10.2   0.1    2.0  2  PIRT      Phosphoinositide-interacting protein family
        9.2    6.4   9.3         28    4.9   7.1    2.6  2  DUF962    Protein of unknown function (DUF962)


Domain annotation for each model (and alignments):
>> Ytp1  Protein of unknown function (Ytp1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.1     0.012        44      37      94 ..      64     121 ..      29     147 .. 0.65
   2 !  358.9   8.5  4.3e-111  1.5e-107       2     276 ..     218     502 ..     217     503 .. 0.95

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.012
        Ytp1  37 lyGlltlarylGafaelGwaWnkkpkksksekrivsaefveslliflYGitnvFlEhl 94 
                 +y lltl+ y+ a  ++ +a ++   k + ++ +    ++ ++li+++Gi+  F+ + 
  EPX71622.1  64 TYVLLTLVGYIFAHMSHHHASHTDYYKGNIHRPVGRVFMWMTFLIVVFGIVTAFIKRT 121
                 4555555555533333333333333333333344444555566666666666666554 PP

  == domain 2  score: 358.9 bits;  conditional E-value: 4.3e-111
        Ytp1   2 afvqvltgvvvllglgrgeevfnllAHfikGgvFflyGlltlarylGafaelGwaWnkkpk.ksksek.rivsaefveslliflYGitnvFlEhlagkg 98 
                 +f++v+tg+v ++g+++g+++fn+lAH+ikGg F++yG+l+++ ylGafae+GwaWn +pk +++  k  ++s+e+ves+++f+YGi+nv+lEhl++++
  EPX71622.1 218 GFFEVCTGIVLFAGIFKGSHIFNGLAHWIKGGLFLWYGILSFGEYLGAFAEYGWAWNIRPKiSQRGFKrFVPSKEMVESSILFTYGISNVWLEHLGNTD 316
                 799**********************************************************7776666588**************************** PP

        Ytp1  99 gewsakdlqHvsiavlfiggGllGlllesklvrkllekaveeaak........eaeekakvslnplPalvilltGilmsaHaQaselstkiHkqwGllL 189
                 g w+++dlqHvsia++ +++Gl+G+l+es++vr++l+++ + a +        +++e+ +vsln++Pa+++++tGi+ms+H+Q+s++st iH+ wG lL
  EPX71622.1 317 GIWNHHDLQHVSIAFMLWWAGLCGILVESNMVRRFLNNSLSYALNqsphegssTSDESPSVSLNLFPAVTVFFTGIMMSSHEQKSQISTVIHVYWGRLL 415
                 **************************************9999877778777643333356*************************************** PP

        Ytp1 190 laaavaRlitylllllkppssvlpsrpptellasflLiagglvFmesteetvealeeegldamfllnvtvgltallmawvllllalk 276
                 +aaav R++ty+ll+lk+pss  p+rppte+++sf+Li+gg++Fm+st ++v+ ++ ++l+am+l+n++v+lt+++m  +l++l lk
  EPX71622.1 416 SAAAVSRACTYALLYLKRPSSPWPTRPPTEIITSFCLICGGIMFMASTYDVVNKIRVNELSAMLLMNLSVALTCIIMGLELFFLGLK 502
                 ********************************************************************************9999887 PP

>> DUF2427  Domain of unknown function (DUF2427)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.0  11.2   4.2e-29   1.5e-25       2     103 ..      16     116 ..      15     118 .. 0.94
   2 ?   -1.4   0.1      0.54   1.9e+03      27      52 ..     382     407 ..     377     423 .. 0.69
   3 ?   -2.9   0.1       1.7     6e+03      85      85 ..     476     476 ..     446     496 .. 0.46

  Alignments for each domain:
  == domain 1  score: 89.0 bits;  conditional E-value: 4.2e-29
     DUF2427   2 yntttyfttdephksalwvHiilmtlalvvvyPvalvLslaksrwylpvqivnlvlavlglllghi..ykgstPelypnniyaklswillillavqvvl 98 
                 y+ ++y+++   +++ l++Hi++m++a+v+++P ++vL++aks++++pvq+ +++l+++g++++h+  +++s  ++y++ni++ +++++++++++ vv+
  EPX71622.1  16 YDFENYANH---MNKYLYAHIVCMLIAYVFILPSGIVLAMAKSKAHIPVQVTYVLLTLVGYIFAHMshHHASHTDYYKGNIHRPVGRVFMWMTFLIVVF 111
                 677777777...779*************************************************9988999999************************* PP

     DUF2427  99 avllk 103
                 +++++
  EPX71622.1 112 GIVTA 116
                 **986 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.54
     DUF2427  27 lalvvvyPvalvLslaksrwylpvqi 52 
                 + +v v+ +++++s+ +++  + + i
  EPX71622.1 382 FPAVTVFFTGIMMSSHEQKSQISTVI 407
                 55677778888888887777666544 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 1.7
     DUF2427  85 s 85 
                 s
  EPX71622.1 476 S 476
                 2 PP

>> DUF2157  Predicted membrane protein (DUF2157)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   0.1   2.3e-05     0.084      65     139 ..      98     254 ..      31     260 .. 0.89
   2 ?    1.3   0.1     0.076   2.7e+02      43      73 ..     449     487 ..     445     502 .. 0.55

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 2.3e-05
     DUF2157  65 vkfllllvllllslllg.avlwrdr.......................................................................... 88 
                  ++ + ++ l+++++++ a++ r+                                                                           
  EPX71622.1  98 GRVFMWMTFLIVVFGIVtAFIKRTLlkdsssnqfldspsvdgrkpeqpmkdtlsygapllenedsqedlesnyegtsprdnqstfaftnlrkaaapkgk 196
                 578888888888888886777665599999999999999999999999999999999999999999999999999999999999999999999999999 PP

     DUF2157  89 ........rvpprlgeallllaalllgaaialvgqifqlsgdaysllllwalllllmay 139
                           ++ lg+++l+l+++ ++++i+l++ if+ s + +++l+ w+ + l+++y
  EPX71622.1 197 lvllsvlrYTHRILGHLWLYLGFFEVCTGIVLFAGIFKGS-HIFNGLAHWIKGGLFLWY 254
                 9999999877899************************965.888888999999888887 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.076
     DUF2157  43 alllglGlilfvAanW........qglsrlvkfllllvl 73 
                 +++l +G i+f+A+ +        ++ls ++ + l ++l
  EPX71622.1 449 SFCLICGGIMFMASTYdvvnkirvNELSAMLLMNLSVAL 487
                 678888888888888844444333333333333333333 PP

>> PIRT  Phosphoinositide-interacting protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.1   0.00012      0.41      60     123 ..      69     134 ..      54     137 .. 0.81
   2 ?   -4.0   0.3       2.8   9.9e+03      80     102 ..     473     494 ..     452     497 .. 0.54

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00012
        PIRT  60 fllGvvittlsrnstlknk..dkevfklsGpaflslGlmllvcGlvwvpiikkkrkqrqkslflqs 123
                  l+G + + +s+ ++++++  + ++++ +G +f+ + ++++v+G+v   i +  +k + +++fl s
  EPX71622.1  69 TLVGYIFAHMSHHHASHTDyyKGNIHRPVGRVFMWMTFLIVVFGIVTAFIKRTLLKDSSSNQFLDS 134
                 4778888888776655544116678899********************9999999**999999876 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 2.8
        PIRT  80 kevfklsGpaflslGlmllvcGl 102
                 +e++ +   + ls+ l  +++Gl
  EPX71622.1 473 NELSAML-LMNLSVALTCIIMGL 494
                 4443333.244666666666665 PP

>> DUF962  Protein of unknown function (DUF962)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   7.1    0.0079        28       2      63 ..      19      81 ..      18      87 .. 0.73
   2 ?    0.7   0.1      0.16   5.8e+02       9      62 ..      87     212 ..      81     233 .. 0.55

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.0079
      DUF962  2 ksleefyafYlaeHsnpinrllHfigvplilltvlllllraklkl.llalfvvgyifafvGHf 63
                ++++++++ Yl  H   + ++  fi  + i+l+++   + +++++  ++l +vgyifa ++H+
  EPX71622.1 19 ENYANHMNKYLYAHIVCMLIAYVFILPSGIVLAMAKSKAHIPVQVtYVLLTLVGYIFAHMSHH 81
                6788899999999977666666666666677776666666666551567889**********7 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.16
      DUF962   9 afYlaeHsnpinrllHfigvplilltvlllllrak................................................................ 43 
                 ++Y+ + ++p+ r + ++   ++++ ++++++  +                                                                
  EPX71622.1  87 DYYKGNIHRPVGRVFMWMTFLIVVFGIVTAFIKRTllkdsssnqfldspsvdgrkpeqpmkdtlsygapllenedsqedlesnyegtsprdnqstfaft 185
                 444444444444444444444444444444443335556666666666666666666666666666665555555555555555555555555555555 PP

      DUF962  44 ........lklllalfvvgyifafvGH 62 
                            l++l v+ y+   +GH
  EPX71622.1 186 nlrkaaapKGKLVLLSVLRYTHRILGH 212
                 555555553444445555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (510 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       902  (0.0503096); expected 358.6 (0.02)
Passed bias filter:                      452  (0.0252106); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.61u 0.26s 00:00:00.87 Elapsed: 00:00:00.45
# Mc/sec: 3424.84
//
Query:       EPX71623.1  [L=357]
Description: dihydroceramide delta-4 desaturase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.9e-21   76.5  16.1    5.5e-21   75.5  16.1    1.4  1  FA_desaturase  Fatty acid desaturase
    9.4e-19   66.6   0.2    1.5e-18   65.9   0.2    1.4  1  Lipid_DES      Sphingolipid Delta4-desaturase (DES)


Domain annotation for each model (and alignments):
>> FA_desaturase  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.5  16.1   6.2e-25   5.5e-21       2     241 ..      91     317 ..      90     324 .. 0.74

  Alignments for each domain:
  == domain 1  score: 75.5 bits;  conditional E-value: 6.2e-25
  FA_desaturase   2 swlalllalllglf.llgitgslaHeaaHgalfkkrklnrwlndllgallglplgisys.awrisHlrHHaytngpdeDpdlaplalsrfeglfry 95 
                    +w +ll ++++g+f  +++ +  +He++H+  fk+  +nr +  ++   + lp+g +ys ++r  H+ HH+  + ++ D+dl++    + e +   
     EPX71623.1  91 NWKFLLTGYFIGAFcNQNV-FLAIHELSHNLGFKRAVHNRLF-SFI---ANLPVGAPYSaSFRPYHMEHHRFQGVDGFDTDLPT----SLELV--- 174
                    58888888******77777.7********6555333333333.555...999999988637***********999999999984....33333... PP

  FA_desaturase  96 llrlllgllvlg.wllalvlglwlrrlarrrapsksrrrkwrllawlllllawlglwlalllllglalllwlvplllllfllalvl.nyveHyg.. 187
                    ll  +lg  ++  + l   ++++ r++++r+ p +s     +++ +++ ++ + +l++ +l++ ++a  ++++  +++++l+ +   ++ eHy   
     EPX71623.1 175 LLDNVLGKAFFCtFQL---FFYAFRPMFVRQLPLTS----LHFWNVVVQFI-FDFLIVKFLGWRSMA--YFFLSSFMAGSLHPTAGhFLSEHYNvt 260
                    3333333333331111...01255666666666665....55555555555.488999999999999..9**********99999988888888** PP

  FA_desaturase 188 ......gdwgerqvetsasirsaswllnlltgnlnyHieHHlfPgvpwyrLpelhrrlre 241
                          +  g+++   + s++    +ln+l++n +yHieHH fP v+w r  ++++   e
     EPX71623.1 261 rtrliqEGPGKDTPLETFSYY---GPLNILVYNAGYHIEHHDFPYVAWTRIAKVRELAPE 317
                    **9999888888888888888...9****************************9965444 PP

>> Lipid_DES  Sphingolipid Delta4-desaturase (DES)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.9   0.2   1.7e-22   1.5e-18       2      37 .]      30      65 ..      29      65 .. 0.96

  Alignments for each domain:
  == domain 1  score: 65.9 bits;  conditional E-value: 1.7e-22
   Lipid_DES  2 rsDFeWvytdePHasRRkeILkkhPeikkLmGpdpl 37
                 +DF+W+yt+ePH+sRR +ILk+hPe+ +L G++p+
  EPX71623.1 30 AHDFYWTYTEEPHKSRRAAILKAHPEVASLNGYEPK 65
                58********************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (357 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       387  (0.0215851); expected 358.6 (0.02)
Passed bias filter:                      261  (0.0145574); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 2473.99
//
Query:       EPX71624.1  [L=158]
Description: Sjogren's syndrome/scleroderma autoantigen 1 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.2e-15   55.6   3.6    6.6e-15   55.0   3.6    1.2  1  Auto_anti-p27  Sjogren's syndrome/scleroderma autoantigen 1 (


Domain annotation for each model (and alignments):
>> Auto_anti-p27  Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.0   3.6   3.7e-19   6.6e-15       1      39 [.      10      48 ..      10      48 .. 0.95

  Alignments for each domain:
  == domain 1  score: 55.0 bits;  conditional E-value: 3.7e-19
  Auto_anti-p27  1 kkmgelLlkGwtMLaetCpvC.gvPLmrdrkggkvyCvaC 39
                   k++g+++l+G+t+L+++Cp+C +vP+mr r+ + ++CvaC
     EPX71624.1 10 KELGNYMLRGYTLLDTVCPECqKVPMMRLRD-QPMFCVAC 48
                   789**************************95.789***** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1541  (0.0859501); expected 358.6 (0.02)
Passed bias filter:                      699  (0.0389871); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1164.21
//
Query:       EPX71625.1  [L=613]
Description: U3 snoRNP-associated protein Utp3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.9e-28   96.7   5.0    7.9e-28   96.7   5.0    2.5  2  Sas10       Sas10 C-terminal domain
    1.9e-10   41.2   0.5    1.5e-09   38.3   0.0    2.8  2  Sas10_Utp3  Sas10/Utp3/C1D family


Domain annotation for each model (and alignments):
>> Sas10  Sas10 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.6      0.62   5.6e+03      16      57 ..     480     520 ..     477     522 .. 0.53
   2 !   96.7   5.0   8.8e-32   7.9e-28       2      74 .]     539     612 ..     538     612 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.62
       Sas10  16 GLtpkRkkenrnpRvkkrkkYekakkklksqvaevkkeegkY 57 
                 GL +++ +e+  +     + Y++   k ks +++ k e+++Y
  EPX71625.1 480 GLLANKDREVDFADQDALEYYNAVSSKSKSEKRKRK-EDHNY 520
                 555555555555555555556666666666666654.44455 PP

  == domain 2  score: 96.7 bits;  conditional E-value: 8.8e-32
       Sas10   2 dgkRkityqIekNkGLtpkRkkenrnpRvkkrkkYekakkklksqvaevk.keegkYsGektGIksnvvkSvkL 74 
                 ++kR it++I+ N+GLtp+R+kenrnpR+kkr++Yekakkkl s++a +k +++++Y+Ge tGIk+++vkS+k+
  EPX71625.1 539 GDKRGITRDIATNRGLTPHRPKENRNPRLKKRMRYEKAKKKLGSKKAIYKgPPKHGYGGEETGIKAGLVKSIKF 612
                 79************************************************88888*****************97 PP

>> Sas10_Utp3  Sas10/Utp3/C1D family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.3   0.0   1.7e-13   1.5e-09       5      86 ..     222     292 ..     218     292 .. 0.82
   2 ?   -1.7   0.4      0.51   4.5e+03       6      22 ..     332     350 ..     317     384 .. 0.64

  Alignments for each domain:
  == domain 1  score: 38.3 bits;  conditional E-value: 1.7e-13
  Sas10_Utp3   5 sksldelqeslepllskakaeekkslsdeklsegisllslKnelllaYllnlllylllk.lsg..velkdhpvvkeLvrlRvyle 86 
                  ++ ++l++s +++++k +         + ++    ll+++ ++l aY++ l++y  ++ l+g   + k+hp++  L+r+++++e
  EPX71625.1 222 MEEYKDLKPSYKEIKEKLE---------STPT---ALLQAQVNALGAYIAFLTFY--FAlLRGgeEDIKNHPIMTDLIRCKQTWE 292
                 5788999999999988422.........2344...5*******************..66466677888****************8 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.51
  Sas10_Utp3   6 ksldelqeslepllsk..a 22 
                 ++l++ q+s e+l ++  +
  EPX71625.1 332 DNLSDMQDSAEELDDEelV 350
                 5677777777777775541 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (613 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1375  (0.0766914); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.73u 0.31s 00:00:01.04 Elapsed: 00:00:00.49
# Mc/sec: 3798.70
//
Query:       EPX71626.1  [L=467]
Description: Nem1-Spo7 phosphatase complex catalytic subunit Nem1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.9e-51  172.1   0.2    1.1e-50  171.5   0.2    1.3  1  NIF       NLI interacting factor-like phosphatase
  ------ inclusion threshold ------
      0.042   12.8   0.8      0.063   12.2   0.8    1.2  1  LMBR1     LMBR1-like membrane protein


Domain annotation for each model (and alignments):
>> NIF  NLI interacting factor-like phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  171.5   0.2   1.2e-54   1.1e-50       1     156 []     295     458 ..     295     458 .. 0.94

  Alignments for each domain:
  == domain 1  score: 171.5 bits;  conditional E-value: 1.2e-54
         NIF   1 ktLVLDLDetLvhskleks.k......klkve.gekvevsvlkRpgldefLkelsklyevvifTasseeyaeavidildpekkllshrlyrescvkkkg 91 
                 ktLVLDLDetL+hs+++ s +      +++v+ ++++ ++++kRp+ld+fL ++s+++ +v+fTas + ya+++id+l+++kkl+ +r+yr++c+  ++
  EPX71626.1 295 KTLVLDLDETLIHSVSRGSrTtsgqpiEVHVPgEHPILYYIHKRPHLDYFLANVSEWFHLVLFTASVQPYADPIIDYLERDKKLFVERYYRQHCTLVNS 393
                 79*************844433778866666669999**********************************************************766** PP

         NIF  92 eyvKdLsllgrdlsrvvivDdspdsfelqpengipiksffsdkkDneLlkllpllkelakvddvr 156
                 ++vKdLs+ +  lsr++i+D+sp s+  ++en+ip++ ++sd++D +Ll+ll++l +l++v+dvr
  EPX71626.1 394 SFVKDLSVCKIHLSRIMIIDNSPASYDIHKENAIPVEGWISDPSDVDLLNLLSFLYALQYVQDVR 458
                 ***************************************************************98 PP

>> LMBR1  LMBR1-like membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.8     7e-06     0.063     269     364 ..      16     106 ..       2     128 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 7e-06
       LMBR1 269 teeslaklekqlikalqkrertekqwkrllekalelediiknksskekefkssessrrgefakqgklkltptleyywaklllplvllilsiilvll 364
                  + +l ++ k+ +++  + e +e+++    e+   +e iikn++  ++++++  +++ g++  + +  + + + y++++ l++++ l++ i    l
  EPX71626.1  16 LATPLERSSKNEKSTAFEAESKEEEYHAHFEEETPVESIIKNQQYVKTNLEKAPNEEDGSVQVR-HANIMRVIAYWLRICLKRICTLFFHI----L 106
                 556889999999999************************************9877666666433.54555566666666666444444443....3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (467 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       732  (0.0408277); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 3233.18
//
Query:       EPX71627.1  [L=871]
Description: RNA polymerase I transcription factor subunit Rrn6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-60  205.8  23.2      5e-60  204.0  23.2    1.7  1  Rrn6      RNA polymerase I-specific transcription-initiation 


Domain annotation for each model (and alignments):
>> Rrn6  RNA polymerase I-specific transcription-initiation factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  204.0  23.2   2.8e-64     5e-60      59     851 .]     197     871 .]     184     871 .] 0.75

  Alignments for each domain:
  == domain 1  score: 204.0 bits;  conditional E-value: 2.8e-64
        Rrn6  59 lrvptidesesgewisdgapIkqIkfaqsserfeekstwlaVrtetsttifrplyhrvpvperspessidskspsridanplleissset.ggfphaDv 156
                 l+vp    +    w + ++pI q+ f    e     s++l V+t t++++f++ yh            ++s  p  i+a pl  ++++++ ++ +++++
  EPX71627.1 197 LHVPAFHLHPYPSW-KFQEPILQVMF--GPE----ASSLLYVLTATEVVLFKISYHIL--------FLEQSDFPAFISAIPLRFLYAKDVyDSDAFVHM 280
                 55566666666667.99*********..444....679*****************997........9999999*****************8899***** PP

        Rrn6 157 aFNPwdqrqfAivDekGnWsvwdisg...rkrknks...klsaslrksgsifdpeledlsset....eldgwkrIlWvsdvntLlVcnrrklvlvdikg 245
                 + +P d++ fA+v   GnW  w+i     r+  +++   ++   + +  +i+ ++ +d+++++       + +rI+W +++  Ll+ n + +v++  ++
  EPX71627.1 281 SSHPSDPSLFATVSASGNWKLWQILEdgyREYLSGTfqaTY---DAALSHIPFASKSDDTDQQevpsPSKNRYRIIWEASSFGLLLANEEAVVHIHPSN 376
                 ************************99888777766533344...44445566666666666556779****************************9999 PP

        Rrn6 246 nsqeelvlaltlsrsse.wILDvkrspvn.pshvfvLTsteliwldvtssseasasdeqaeltrllSwkHfrdpeDttLrltvlevgkgsedllvliyS 342
                  s    +++l  ++ ++ +IL+v  +  +  s +f+LT+ ++iw+d+           q+++ +ll wkH r+  D+tL++ v++   +   ++v++yS
  EPX71627.1 377 PS----IPRLLYKCDKDsAILQVSSEVLHvASEFFILTTDAVIWMDI-----------QQPIQPLLVWKHHRS-RDPTLQMKVFNAFIE--NIYVSLYS 457
                 99....4444444444449******998879***************9...........9**************.*************55..6******* PP

        Rrn6 343 rlnnlvlvfrfsisssessaqssgsDPfildlpqdseteeassgissiqvlpaflfrseedssglgrdyseegvkffqlfvldsdlslheslyssstep 441
                  ln +++ f+fs+++  + a ssg+ Pf+l        ++ ++ i+s++++p+++    ++++g+++++s+ +  f+ ++v +sd+s++  l++  +++
  EPX71627.1 458 GLNGIIQEFHFSKDR--ALAISSGP-PFLLL-------HDIQVPIQSLTMQPCYF---IDAEDGQTTQDSRFDSPFWSVIVHRSDGSITINLIC--EKS 541
                 ***********9998..56799999.99998.......579************87...4788899999999999********************..333 PP

        Rrn6 442 srelrspakelrlkdlskssikrkkkekrkktasrkeddfvvpdglelkvrkeksaklkrsssaslapeqrtldfervysassteeaeeqsfqdllyrl 540
                 s+el + +++ +++    +s k  + + r+k + ++e +  v +++                     +++  ++++++  +s+tee+   s+ d+  +l
  EPX71627.1 542 SSELYEIEEVNDST-RHLASLKYLSLDDREKDVDNFEKEAEVYKTYI--------------------IHPSVRKLQNWL-TSKTEESGLISLNDFSIQL 618
                 33333333333333.22333344444444444555555555555555....................333333333444.3467788888888888888 PP

        Rrn6 541 seaiqqlllegsesersplktlleladlplsvedvdefaseleqllsfyeekditfsslktilklllselvsr..slddiydkllelWlsplprdipsr 637
                 ++ +q+     ++  ++++ tl +l+++++  + ++  ++  + +       + + + + +i++l+ls++ s+  +  ++ + l + W++pl++++  +
  EPX71627.1 619 KNDLQDK----QMLFSESIVTLFDLLQSKKLSTQFKGLDEVVDYIKG-----TAIPEYFPHISHLSLSSNNSDalHSKELLENLSRVWVTPLASNTEFK 708
                 8888855....444444445*******99999999887776666666.....666666667777777666552458899*************9999555 PP

        Rrn6 638 vrlakerl..irevaaelllSsirvsklraeasslssslssssssssssssssssedpelsredplda.lsrytklikssptslsrsvsniLshWelgs 733
                       rl  +  +   +l Ss++++kl                      s ++++ ++ ++     a ls +++++++ p +l +++s++L  W+lg 
  EPX71627.1 709 SL-IDFRLntLHHISNYVLMSSVGFAKL-------------------FPGSTEDVNLESFKS-----AeLSFISPFQTKQPVKLHEDASEMLKGWSLGK 782
                 55.6566556*****************2...................222223334444443.....55*****************************9 PP

        Rrn6 734 dpaeydwqrtesaleaeeqrqrarrkrekrrrrkeklklasraeasssssssqssssksssssssqlpsssqvptlpd......fslsmqissSQvvss 826
                  + +y+  +++ ++++      +++  e  + + ++                              lpss+ +++ ++      +s+s+   sSQ+++ 
  EPX71627.1 783 VNTTYNIGDSSVDISE---PLTSQTL-EFTEPSLSS----------------------------FVLPSSQIATVHSEdalppsQSSSFPEFSSQATPV 849
                 99****9999999984...2222222.222222222............................22333333333333222223333334457777655 PP

        Rrn6 827 smSQperGrFgsRpakkKKKRkaGF 851
                  mSQ++ G++g+Rp  kKKK+++GF
  EPX71627.1 850 -MSQVVTGKYGARP--KKKKKRSGF 871
                 .************9..9999999*9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (871 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       307  (0.0171231); expected 358.6 (0.02)
Passed bias filter:                      241  (0.0134419); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.27s 00:00:00.93 Elapsed: 00:00:00.44
# Mc/sec: 5986.45
//
Query:       EPX71628.1  [L=601]
Description: ATP-dependent DNA helicase Irc3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.3e-25   89.0   0.0    6.8e-25   88.0   0.0    1.6  1  ResIII         Type III restriction enzyme, res subunit
    4.8e-17   62.3   0.0    4.7e-16   59.1   0.0    2.3  2  Helicase_C     Helicase conserved C-terminal domain
    3.3e-15   56.3   0.0    5.2e-13   49.1   0.0    2.4  2  DEAD           DEAD/DEAH box helicase
    2.2e-05   24.2   0.0    4.1e-05   23.3   0.0    1.4  1  SWI2_SNF2      SWI2/SNF2 ATPase
    0.00024   21.4   0.0     0.0013   19.0   0.0    2.1  2  AAA_22         AAA domain
  ------ inclusion threshold ------
      0.011   15.8   0.0      0.025   14.6   0.0    1.6  1  Flavi_DEAD     Flavivirus DEAD domain
      0.012   16.0   0.0      0.029   14.7   0.0    1.6  1  AAA_19         AAA domain
      0.022   14.0   0.0       0.07   12.3   0.0    1.8  2  ERCC3_RAD25_C  ERCC3/RAD25/XPB C-terminal helicase


Domain annotation for each model (and alignments):
>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.0   0.0     3e-28   6.8e-25       4     171 .]      31     189 ..      28     189 .. 0.86

  Alignments for each domain:
  == domain 1  score: 88.0 bits;  conditional E-value: 3e-28
                 E-HHHHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S......-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--..... CS
      ResIII   4 lreyQeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkee.kflflvprkslleqtleefkkflseaykeigkkvsgdkkkakekds 101
                 lr+yQee+i++ +++++  ++kr+ i +aTG+GKT +  +l+++  + + +  ++l+lv+r++l +q++ +f +++++++     +v+  +++a    +
  EPX71628.1  31 LRPYQEECINSCIAAFQ-AGKKRVGISLATGSGKTALFPHLVQKTPELRTNAnQCLILVHRRELAQQAYATFLEIFNKQD----VEVDMGSQHA----T 120
                 8***************9.********************9999999887766569**********************9984....2333333333....6 PP

                 ..-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS.TTTHHH......HHT---SEEEEEESS-S- CS
      ResIII 102 tnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgakkswrei......lekfkeavllglTATper 171
                  n+ i+v++  sl+ d+       e++ ++ f++ii+DE+H+l+a  ++ ++      +e++++ +l+glTAT++r
  EPX71628.1 121 GNAPITVASPMSLKGDR------LEKYNPKDFKLIIVDEVHHLAA-PTYLRVlrhfgaNEANSQVYLVGLTATFYR 189
                 7****************......99********************.999998344444455577*********985 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.42   9.4e+02      11      39 ..      76     109 ..      63     154 .. 0.61
   2 !   59.1   0.0   2.1e-19   4.7e-16      10     110 ..     263     363 ..     253     364 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.42
                 HHTTTTSEEEEEESSHHHHHH.....HHHHHHHT CS
  Helicase_C  11 kleeeggkilifvntidrlek.....vklllekk 39 
                 +l+ + +++li v++++ +++     +++++++ 
  EPX71628.1  76 ELRTNANQCLILVHRRELAQQayatfLEIFNKQD 109
                 6788889999999999966555545555553333 PP

  == domain 2  score: 59.1 bits;  conditional E-value: 2.1e-19
                 HHHTTTTSEEEEEESSHH.HHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHHHHHHHTTS CS
  Helicase_C  10 lkleeeggkilifvntid.rlekvklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvtsyiqriGRt 107
                 +k+ ++++ +l+f++t++ +l+ ++ + ++ gi + vl g+++++er+  +e+f+++++ vL+   v+ +G dip+++++i+  +  ++  + q+iGR 
  EPX71628.1 263 IKHARNRNSTLVFCTTVEhSLKVCNAF-RTLGIDARVLSGRTNSDERRSLVEEFREKKFPVLVNCLVLTEGADIPNIDCLIIARPTNSPNLLTQMIGRG 360
                 5788999***********655446777.3449******************************************************************9 PP

                 SST CS
  Helicase_C 108 gRa 110
                  R+
  EPX71628.1 361 LRM 363
                 996 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.1   0.0   2.3e-16   5.2e-13       2     169 ..      33     187 ..      32     193 .. 0.78
   2 ?    4.6   0.0     0.011        25      27     104 ..     252     330 ..     250     341 .. 0.76

  Alignments for each domain:
  == domain 1  score: 49.1 bits;  conditional E-value: 2.3e-16
                 HHHHHHHHHHH.....TTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHH CS
                 xxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   2 diQaeaiplil.....gggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskld 95 
                 ++Q+e+i+ ++     g++ v ++ +TGsGKT+ f   v  +  e  +++++++li++  reLa+q + ++ +++++ d++v   +g++ a        
  EPX71628.1  33 PYQEECINSCIaafqaGKKRVGISLATGSGKTALFPHLVQ-KTPE-LRTNANQCLILVHRRELAQQAYATFLEIFNKQDVEVD--MGSQHA-------T 120
                 7999***999988887779**************9876655.4434.799999************************8775554..453333.......3 PP

                 TTCSEEEEEHHHHHH.HHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSB CS
                 xxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  96 ngvdivvgtpgrldd.llstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATl 169
                  ++ i+v+ p  l    l  +k n ++++++++DE++ l    + + +++  ++        ++q  ++ l+AT+
  EPX71628.1 121 GNAPITVASPMSLKGdRL--EKYNPKDFKLIIVDEVHHLAAPTYLRVLRHFGANE------ANSQVYLVGLTATF 187
                 579*******99998344..4679***************9986665555532222......34555688999997 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.011
                 HHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEE.EEETTSSHHHHHHHHHTT.....CSEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxx.....xxxxxxx RF
        DEAD  27 KTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvl.liiggvaardqlskldng.....vdivvgt 104
                 KT++f ip   ++   + ++++ +l+ + t e   +++n +++++   d rvl   ++++++r+ +++++++     v+++v t
  EPX71628.1 252 KTAIFEIPQA-WIK--HARNRNSTLVFCTTVEHSLKVCNAFRTLGI--DARVLsGRTNSDERRSLVEEFREKkfpvlVNCLVLT 330
                 9*******99.443..5899999********************998..577873335567777777777643455555666655 PP

>> SWI2_SNF2  SWI2/SNF2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.0   1.8e-08   4.1e-05       2     142 ..      35     167 ..      34     197 .. 0.75

  Alignments for each domain:
  == domain 1  score: 23.3 bits;  conditional E-value: 1.8e-08
   SWI2_SNF2   2 QyravekavervkegdrkgGviWHtqGSGKsltmvflakklleeelknpkvvvvtDRkdLdkQlsktfakageekpkqaesrkeLkellekesekiift 100
                 Q  ++++ +++ ++g+++ G+    +GSGK+     l++k  e +++  + ++++ R++L +Q ++tf ++ +++ ++++ +    ++   ++++  +t
  EPX71628.1  35 QEECINSCIAAFQAGKKRVGIS-LATGSGKTALFPHLVQKTPELRTNANQCLILVHRRELAQQAYATFLEIFNKQDVEVDMG----SQH--ATGNAPIT 126
                 7778899999999999999965.578***************998889999*******************9877765444443....333..23444445 PP

   SWI2_SNF2 101 tiqKfeeeekeklevlsereniivlvDEaHRsqygelakklr 142
                 +   ++  + ++le+++ ++  +++vDE H     ++ + lr
  EPX71628.1 127 VASPMSL-KGDRLEKYNPKDFKLIIVDEVHHLAAPTYLRVLR 167
                 5555543.2346888999999999999999877666666555 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.0   5.7e-07    0.0013      14     130 ..      59     183 ..      58     189 .. 0.71
   2 ?   -1.4   0.0       1.2   2.6e+03      47      98 ..     296     374 ..     251     395 .. 0.53

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 5.7e-07
      AAA_22  14 sGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelka...........erlsseellealeqalrarav..ielliiDE 99 
                 +G+GKT l   l+++ +e      ++  +++v   ++   ++ +  +l++++ +  +           ++ +    +++  + l+++     +l+i+DE
  EPX71628.1  59 TGSGKTALFPHLVQKTPELRTN--ANQCLILVHRRELA--QQAYATFLEIFNKQDVEvdmgsqhatgnAPITVASPMSLKGDRLEKYNPkdFKLIIVDE 153
                 8**************9865443..34444444333333..44444444444444444445677777998889999999999999999989999****** PP

      AAA_22 100 aqhlrseealeeLrsl.lnlsrkgvqliLvGt 130
                 ++hl  ++ l+ Lr++ +n  + + q+ LvG 
  EPX71628.1 154 VHHLAAPTYLRVLRHFgAN--EANSQVYLVGL 183
                 ****548888888887445..99999999985 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1.2
      AAA_22  47 lpsst..sskdllrellralglelka........................erlsseellealeqalrarav.ielliiD 98 
                 + +++  + +d +r l++++ +++                          +++s   l +++ + lr     + +l++D
  EPX71628.1 296 ARVLSgrTNSDERRSLVEEFREKKFPvlvnclvltegadipnidcliiarPTNSPNLLTQMIGRGLRMSPGkKDCLVLD 374
                 3333333444444444444444444444444444444455555555555333333333355555555554455555555 PP

>> Flavi_DEAD  Flavivirus DEAD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   1.1e-05     0.025       8     135 ..      54     186 ..      47     189 .. 0.70

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1.1e-05
                 EEE--TTS-TTTTHHHHHHHHHHHTT...--EEEEESSHHHHHHHHHH....TTTS-EEE-------------SEEEEEHHHHHHHHHHT------SEE CS
  Flavi_DEAD   8 vldlhPGaGktrkvlpelvkeaierr...lrtlvLaPtrvvlaemeea....lkglevryktsavkeektgrelvdvmchatftkrllspvrkknyeli 99 
                  + l  G+Gkt  ++p+lv+++ e r    + l+L+  r  ++  +      +++++v+ +    ++++tg++ ++v+    +   +l++ + k+++li
  EPX71628.1  54 GISLATGSGKTA-LFPHLVQKTPELRtnaNQCLILVHRRELAQQAYATfleiFNKQDVEVDM--GSQHATGNAPITVASPMSLKGDRLEKYNPKDFKLI 149
                 577889****97.5677776665544111678*****9999887665510004555555544..4568999**************************** PP

                 EEETTT--.SHHHHHHHHHHHHHHHTTS-EEEEEESS CS
  Flavi_DEAD 100 imDeahfl.DPasiaarGyletkaeegeaalilltat 135
                 i+De h+l  P+ + +  +   ++ + ++ l+ ltat
  EPX71628.1 150 IVDEVHHLaAPTYLRVLRHFGANEANSQVYLVGLTAT 186
                 *****98625666665555555555555666666665 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   1.3e-05     0.029       7     136 ..      47     182 ..      41     184 .. 0.67

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.3e-05
      AAA_19   7 alkekvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAakelrerlaalgae......atTiHrlalldfddlltealelle.eaeeek 98 
                 ++ +k + +    G+GKT +  h v+   el++ +++++l++   +  a++      ++  +          H+ ++  ++     +   l+ ++ e+ 
  EPX71628.1  47 QAGKKRVGISLATGSGKTALFPHLVQKTPELRT-NANQCLILVHRRELAQQAYATFLEIFNKqdvevdMGSQHATGNAPITVAS--P-MSLKgDRLEKY 141
                 6667777788889*****************995.57****99988876666665444444444666666666766443222222..2.22333222222 PP

      AAA_19  99 klqeeellivDEfqdvd.elqyrLlkallgek..kklllvG 136
                 + ++ +l+ivDE+  +  ++  r+l+    ++   ++ lvG
  EPX71628.1 142 NPKDFKLIIVDEVHHLAaPTYLRVLRHFGANEanSQVYLVG 182
                 2224459**********99******9987655345577777 PP

>> ERCC3_RAD25_C  ERCC3/RAD25/XPB C-terminal helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       2.7   6.1e+03     138     156 ..      19      38 ..      16      47 .. 0.64
   2 ?   12.3   0.0   3.1e-05      0.07      56     153 ..     265     365 ..     252     378 .. 0.76

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 2.7
  ERCC3_RAD25_C 138 rrqeaqrl.GriLrakkksn 156
                    +r    rl G+iLr+ +++ 
     EPX71628.1  19 KRVYTIRLfGKILRPYQEEC 38 
                    555555655999*9988754 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 3.1e-05
  ERCC3_RAD25_C  56 hekrgDkiivfsDnv.faLkeyakk.....lkkpyiyGetseaerlkilqkfkknpkvntiflskvgDtsiDlPeanvliqisshfgsrrqeaqrl 145
                    h +  +  +vf+  v ++Lk   ++     +  + + G+t++ er +++++f+++ k+ +++   v  +  D+P+  +li i+  + s     q +
     EPX71628.1 265 HARNRNSTLVFCTTVeHSLKV-CNAfrtlgIDARVLSGRTNSDERRSLVEEFREK-KFPVLVNCLVLTEGADIPNIDCLI-IARPTNSPNLLTQMI 357
                    555556678888887334443.33301111567899****************987.778888888888899********9.778888999999999 PP

  ERCC3_RAD25_C 146 GriLrakk 153
                    Gr Lr   
     EPX71628.1 358 GRGLRMSP 365
                    99999765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (601 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       490  (0.02733); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.45
# Mc/sec: 4028.02
//
Query:       EPX71629.1  [L=373]
Description: tRNA pseudouridine synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-41  142.7   0.0    3.5e-40  137.8   0.0    2.3  2  TruB_N         TruB family pseudouridylate synthase (N termin
    7.9e-06   25.9   0.0    1.6e-05   25.0   0.0    1.4  1  TruB_C_2       tRNA pseudouridylate synthase B C-terminal dom
      0.004   16.4   0.0     0.0058   15.8   0.0    1.1  1  Peptidase_M36  Fungalysin metallopeptidase (M36)
  ------ inclusion threshold ------
      0.036   14.2   1.6        5.2    7.2   0.5    2.2  2  Mago_nashi     Mago nashi protein


Domain annotation for each model (and alignments):
>> TruB_N  TruB family pseudouridylate synthase (N terminal domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.8   0.0   7.7e-44   3.5e-40       6     135 ..      57     187 ..      50     202 .. 0.91
   2 ?    2.5   0.1     0.039   1.7e+02      95     149 .]     249     310 ..     213     310 .. 0.64

  Alignments for each domain:
  == domain 1  score: 137.8 bits;  conditional E-value: 7.7e-44
                 -S-EEESS---TT-EEEEEEEEGGGGGGHHHCTTS-EEEEEEEEETEEETTSBTTS-EEE-.--TT--HHHHHHHHHHC-EEE---------------- CS
      TruB_N   6 akkvGhtGtLDplatGvLvvavgeaTklleylleadKeYeatirlgaetdteDaegeileeekveklteekleevlkkftGeieqvppmySAvkvnGkr 104
                   k+Gh+GtLDpla+GvLvv++g +Tk l +ll+  K+Y+at+ +g +t+t+D++g+i++ +  +  ++e++ + l++f+G+i q+pp ySA++++Gkr
  EPX71629.1  57 DIKIGHGGTLDPLASGVLVVGLGIGTKQLPQLLSCVKKYKATCLFGCSTNTYDSSGKIIRVA-SKIPSKEEIADGLAAFRGDILQIPPLYSALHIQGKR 154
                 34*********************************************************984.77889******************************* PP

                 ------------..-----EEEEEEEEEEEEEE CS
      TruB_N 105 lyelaregeeve..rkkrkvtiyelelleveep 135
                 lye+areg  +   +k+r++++++lel+e++e+
  EPX71629.1 155 LYEYAREGLPLPenVKPRPMKCDHLELVEFHEK 187
                 ********877533899*************876 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.039
                 ------.------------....---------EEEEEEEEEEEEEE..EEEEEEEESTTTTH CS
      TruB_N  95 ySAvkv.nGkrlyelareg....eeverkkrkvtiyelelleveep..evelevecskGtYi 149
                  SAvk  +G+ + +   +g    +e + kkrk ++++le  +      ++ l++++s+G+Y+
  EPX71629.1 249 DSAVKTaSGESITKTEDNGgtdkNEPKPKKRKLEVTDLERGSRPAIgpSAVLDMSVSSGFYV 310
                 56666524666666666664432344455677777777776654325599999999999997 PP

>> TruB_C_2  tRNA pseudouridylate synthase B C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.0   3.5e-09   1.6e-05       1      56 [.     311     364 ..     311     368 .. 0.88

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 3.5e-09
                 HHHHHHHHHHTTS-EEEEEEEEEEETTE..GG-..B-HHHHHHHHHHHHT--HHHHHE CS
    TruB_C_2   1 RtLcdDiGeaLgcgAhveeLRRtrvgpf..deedmvtledLedavllykedeeLdrll 56 
                 R+ ++D++  +g  Ah+ +L Rt+ g+f    e +++++++++a +    +++L +ll
  EPX71629.1 311 RSVIHDLAHHIGSEAHMVDLVRTQQGDFflGGETCFEFDEFQSAGW----EQKLASLL 364
                 999*************************9*77778********887....55565555 PP

>> Peptidase_M36  Fungalysin metallopeptidase (M36)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   1.3e-06    0.0058      11     115 ..     215     322 ..     209     336 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1.3e-06
                    SGGG---EEEE--S-TTTTTT-TTB-S.S-B......-SBSBSSSEEEEE-TT-S--T--....B-TT.-EE-----T.T-SSGGGGHHHHHHHHH CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxx RF
  Peptidase_M36  11 dpsegerelvtdpedkeaSplgWhdteakak....aettttrGNNvlaqedsegsnllrpgssadsgaelkfdypyse.keeepkkyadaavtnlF 101
                    d +++e    ++ ++k+ Sp+  +d+++k++    + ++t++G  ++ +ed  g++ ++p  ++++ +  + d +  +  +  p+   d++v   F
     EPX71629.1 215 DKEKKEVDSNSEVTEKHNSPQETTDDSQKSHveedSAVKTASGESITKTEDNGGTDKNEP--KPKKRKLEVTDLERGSrPAIGPSAVLDMSVSSGF 308
                    555555566666677788888877776665566668899999*99999999988888666..44444545555555442357899999******** PP

                    HHHHHHHHHHHHTT CS
                    xxxxxxxxxxxxxx RF
  Peptidase_M36 102 YtnnlihDllyryG 115
                    Y+  +ihDl ++ G
     EPX71629.1 309 YVRSVIHDLAHHIG 322
                    ***********999 PP

>> Mago_nashi  Mago nashi protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0     0.003        13      48      81 ..      15      50 ..       7      63 .. 0.73
   2 ?    7.2   0.5    0.0012       5.2      20      85 ..     182     247 ..     176     267 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.003
  Mago_nashi 48 vskavlkelkriieeseilk..eddakwpkkdkvgk 81
                 s++ l+e+k ii++se++k  ++d  +p+ ++  +
  EPX71629.1 15 SSAQCLNEIKAIISKSELAKffQSDPPHPNDKNSKR 50
                56789***************6656655555554444 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0012
  Mago_nashi  20 fefksdgklryannsnYkndslirkevlvskavlkelkriieeseilkeddakwpkkdkvgkqele 85 
                 +ef+++g+ +y +   + +++ i+ e l+ ++  ke k++ ++se+++++++   ++d   k  +e
  EPX71629.1 182 VEFHEKGQHNYNDPDVFASKEEIKSEELLRPVSDKEKKEVDSNSEVTEKHNSPQETTDDSQKSHVE 247
                 48999******************************************9998877777766666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (373 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1170  (0.0652574); expected 358.6 (0.02)
Passed bias filter:                      550  (0.0306766); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.61u 0.28s 00:00:00.89 Elapsed: 00:00:00.47
# Mc/sec: 2404.96
//
Query:       EPX71630.1  [L=294]
Description: 60S ribosomal protein L5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-77  259.5   0.0    1.8e-77  259.0   0.0    1.3  1  Ribosomal_L5e    Ribosomal large subunit proteins 60S L5, and
    4.6e-31  107.6   3.5    4.6e-31  107.6   3.5    1.8  2  Ribosomal_L18_c  Ribosomal L18 C-terminal region
  ------ inclusion threshold ------
      0.038   14.4   0.0      0.086   13.2   0.0    1.6  1  Ribosomal_L18p   Ribosomal L18 of archaea, bacteria, mitoch. 
      0.063   13.5   0.1       0.27   11.5   0.1    2.1  1  Thr_synth_N      Threonine synthase N terminus


Domain annotation for each model (and alignments):
>> Ribosomal_L5e  Ribosomal large subunit proteins 60S L5, and 50S L18
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  259.0   0.0   3.9e-81   1.8e-77       1     163 []      14     176 ..      14     176 .. 0.99

  Alignments for each domain:
  == domain 1  score: 259.0 bits;  conditional E-value: 3.9e-81
  Ribosomal_L5e   1 krfqvkfrrrregktdYyarkrliiqdknkyntpkyRlvVrvtnkdiicqiayakiegdkvlaaayskelpkygvkvgltnyaaaYatglllarrl 96 
                    +rfq+k+rrrregktdYyarkrli q+knkyn+pkyRlvVr++n+ ++cq+++++++gd vlaaa+s+elp+yg+k gl n++aaYatgll+arr+
     EPX71630.1  14 SRFQTKYRRRREGKTDYYARKRLISQAKNKYNAPKYRLVVRFSNRFVTCQVISSRVTGDYVLAAAHSSELPRYGIKWGLANWSAAYATGLLVARRA 109
                    6*********************************************************************************************** PP

  Ribosomal_L5e  97 lkklgldkiyegqeevtgeeynveeideekrafkaiLdvGLartttgakvfgalkgavdgglsiphs 163
                    l k+gl+++yeg +e++g+   +e+i++ +r+fk++LdvGL+rt+tg++vfga+kga+dggl++phs
     EPX71630.1 110 LIKIGLADKYEGITEPEGQFELTEAIEDGPRPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLYVPHS 176
                    ******************************************************************7 PP

>> Ribosomal_L18_c  Ribosomal L18 C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.4       1.4   6.2e+03      70      88 ..      23      41 ..       4      51 .. 0.51
   2 !  107.6   3.5     1e-34   4.6e-31       2      95 .]     193     287 ..     192     287 .. 0.95

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.4
  Ribosomal_L18_c 70 evkkeskkykkkkltleqr 88
                     + + ++ +y +k+l  + +
       EPX71630.1 23 RREGKTDYYARKRLISQAK 41
                     3333444555555444433 PP

  == domain 2  score: 107.6 bits;  conditional E-value: 1e-34
  Ribosomal_L18_c   2 evlrkrIfgkhvaeYmeeLkeedeekykkqFskyikkgieaddleelykkahaaIredpvkkek.kekkevkkeskkykkkkltleqrkarvkq 94 
                      e+lrk+I+g+hvaeYme+L ++dee+++kqFs+ i++gie+d+le++y++a+++Iredp++k++ k+ + +k+es kyk++klt e+rk+r ++
       EPX71630.1 193 ETLRKYIYGGHVAEYMEMLIDDDEERFQKQFSSLIADGIESDQLEDIYAEAFSKIREDPNPKKSdKDVSAIKAESLKYKQRKLTGEERKERFNA 286
                      89**********************************************************9766688888999******************988 PP

  Ribosomal_L18_c  95 K 95 
                      K
       EPX71630.1 287 K 287
                      7 PP

>> Ribosomal_L18p  Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.9e-05     0.086      19      82 ..      43     110 ..      19     116 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.9e-05
                     -TTSSS-EEEEEE-SS-EEEEEE-T..TT--EEEEECS-SCCCT..S-SSSCHHHHHHHHHHHHHHHC CS
  Ribosomal_L18p  19 sgtaerprlvvfrsnrhiyaQvidd..vkgktlasastlekelk..lkstknkeaakkvgeliAerak 82 
                     + +a + rlvv  snr++  Qvi +  + + +la+a + e      +    n +aa + g l+A+ra+
      EPX71630.1  43 KYNAPKYRLVVRFSNRFVTCQVISSrvTGDYVLAAAHSSELPRYgiKWGLANWSAAYATGLLVARRAL 110
                     3455688****************873356789999988776544444667899999999999999997 PP

>> Thr_synth_N  Threonine synthase N terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1     6e-05      0.27      23      40 ..     166     183 ..     154     244 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 6e-05
  Thr_synth_N  23 AeDgGLyvPeeiPklsae 40 
                  A+DgGLyvP++  ++   
   EPX71630.1 166 ASDGGLYVPHSPSRFPGY 183
                  99******9865544333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (294 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       585  (0.0326287); expected 358.6 (0.02)
Passed bias filter:                      407  (0.0227007); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 2130.14
//
Query:       EPX71631.1  [L=149]
Description: hypothetical protein SOCG_01846 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-13   50.7  10.7      2e-13   50.7  10.7    1.8  2  DUF4598   Domain of unknown function (DUF4598)


Domain annotation for each model (and alignments):
>> DUF4598  Domain of unknown function (DUF4598)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.7  10.7   1.1e-17     2e-13       1     103 [.      14     121 ..      14     128 .. 0.71
   2 ?    1.4   0.2     0.025   4.4e+02       6      34 ..     111     142 ..     107     148 .. 0.50

  Alignments for each domain:
  == domain 1  score: 50.7 bits;  conditional E-value: 1.1e-17
     DUF4598   1 LlsrlkaFLPqlkaaNkkLekeiaagkvadleidevdddeeqyIEMnLgLGvleekrdeesesdsdsssddedsesdekeesakke............. 86 
                 Ll++ k FLPqlk+aN++L+++       +++++++++de+ yIEM+L+LGvlee++ +++e +++s + ++++++  k e+  ++             
  EPX71631.1  14 LLDQCKTFLPQLKEANEELQNSE-----GKHDLQDLSNDEN-YIEMDLALGVLEEQSAKHNELEQESLNAEKGDDEV-K-ENPLEHllniyhqqlenps 104
                 678899**************987.....579**99999887.*************9998855444444433333333.2.2333323556666777777 PP

     DUF4598  87 kesnvldkllgkksksk 103
                 ++++ l+++lg+k +++
  EPX71631.1 105 DNDTTLTDFLGEKLSKA 121
                 66777777777776665 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.025
     DUF4598   6 kaFLPq.l.kaaNkkLekeiaagkv.adleid 34 
                  +FL++ l kaa ++Le++ ++    +  ei+
  EPX71631.1 111 TDFLGEkLsKAAQADLEQKPDESDEsNLREIE 142
                 56666423255666777776543321333344 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1135  (0.0633053); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.28s 00:00:00.68 Elapsed: 00:00:00.43
# Mc/sec: 1036.89
//
Query:       EPX71632.1  [L=393]
Description: NAD/NADH kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-73  247.2   0.0    2.8e-73  246.6   0.0    1.2  1  NAD_kinase  ATP-NAD kinase
  ------ inclusion threshold ------
       0.03   13.8   0.0      0.081   12.4   0.0    1.7  1  TPALS       TIR- and PNP-associating SLOG family
      0.049   13.2   0.0       0.08   12.6   0.0    1.4  1  DAGK_cat    Diacylglycerol kinase catalytic domain


Domain annotation for each model (and alignments):
>> NAD_kinase  ATP-NAD kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  246.6   0.0   4.7e-77   2.8e-73       2     291 ..      80     372 ..      79     373 .. 0.96

  Alignments for each domain:
  == domain 1  score: 246.6 bits;  conditional E-value: 4.7e-77
                 EEEEESSCGGTCSHHHHHHHHHHHCT-..EEEEECCGGCCSSSTT--HHHHTTTT--.......EEECCC-TTTTTSSSEEEEEE-HHHHHHHHHHHHH CS
  NAD_kinase   2 vgivvnpikkeaieraeevarwLldalsrvlevtveeklgeslaeaaefrsevisvlkkvkttddtrkaleafadagvdliivvGGDGTaldvarllqk 100
                 ++iv +p ++e +e ++e+ +wLl    +++ +  ++++ esl+++    +e i+         ++++ l++++ + +dl++++GGDGT+l  +rl+q+
  EPX71632.1  80 ILIVSKPGDEEVDEKVRELIDWLLSL--ENVVIFIQKSM-ESLFQK----HERIQ---------YWTTLLCTKHSQLFDLVLALGGDGTVLYTSRLFQR 162
                 89************************..68888888888.666765....45555.........9********************************** PP

                 CT-EEEEEESSS--SS-SEEGGGHHHHHHHHHHT-SEEEEEEEEEEEEEETTE........................EEEEEEESSEEEEEESSSSS-E CS
  NAD_kinase 101 aeiPvlgvnaGvkgfltefepeaaaellekllegeirvekrevldavimrskgee..................diadiviensvlnevviirgpgstli 181
                  ++P++ + +G++gflt f++++++  ++++ + e+ + +r+++++ +m++  +                   d++d+ +   vlnevvi+rgp++ ++
  EPX71632.1 163 TVPPIMPFAMGTLGFLTHFDINNYKDSISEICK-EMYIHLRTRFECRVMKKRDRSklisidrhlsqslretdtDTHDFTNSLVVLNEVVIDRGPNTAMS 260
                 ********************************9.999************9999889******************************************* PP

                 EEEEEETTEEEEEEEESEEEEE-TGGGGTHHHHTT--EE-TT---EEEEEESESSS----EEE-TT-EEEEEE-..SS--EEEEETTTEEEEE-TT-EE CS
  NAD_kinase 182 elelyvdtelleadqldglivstPtGstayslsaGgplisPgvlailivpicPhslssrpiVvssssklrirva..srseallaldGseelelspgdev 278
                 +l lyvd ++l+++ +dgl+vstPtGstaysl+aGg+l++P++  ++++pic+hsls rpi v++s+ l ++v+  + ++ ++ +dG+ ++el pgd++
  EPX71632.1 261 DLMLYVDSKYLTTVKADGLCVSTPTGSTAYSLAAGGSLCHPDISVMIVSPICAHSLSLRPIHVPDSMALHVVVPqdASQSSWISFDGRNRTELLPGDYL 359
                 **************************************************************************99999******************** PP

                 EEEEESSEEEEEE CS
  NAD_kinase 279 rvtasdkkfklir 291
                 +v+ s+++f +++
  EPX71632.1 360 TVRISRYPFPTVH 372
                 **********998 PP

>> TPALS  TIR- and PNP-associating SLOG family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   1.4e-05     0.081      63     166 ..      57     172 ..      39     180 .. 0.66

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.4e-05
       TPALS  63 liwe..aikenlasrpadasgplavvvshhkteeqipeerreLwdrLraselvki..esieddnmt.gkrie........aqarvgdalialGGgkGVs 148
                 ++we  +i+++l+ +p + +    + + ++   e++ e+ reL+d L + e v i  ++ ++ +++  +ri+        +  ++ d ++alGG+  V+
  EPX71632.1  57 VVWEtrTINKKLHVTPIHPN-ITSILIVSKPGDEEVDEKVRELIDWLLSLENVVIfiQKSMESLFQkHERIQywttllctKHSQLFDLVLALGGDGTVL 154
                 56651146666666666634.44444444677999999999999999888877552233333333312333311111111556678999********** PP

       TPALS 149 ylAnkyhkagkPviPLdl 166
                 y  ++++ +  P++P+ +
  EPX71632.1 155 YTSRLFQRTVPPIMPFAM 172
                 ***************976 PP

>> DAGK_cat  Diacylglycerol kinase catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   1.3e-05      0.08      46      92 ..     132     174 ..      80     202 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.3e-05
                 HHHHHHHHCC-SEEEEEESHHHHHHHHHHHCTHHCTTSEEEEEE-SS CS
    DAGK_cat  46 elakeakeegvdlivvaGGDGtvsevlnglleelatkpplgiiPlGt 92 
                  l++++++  +dl++++GGDGtv      + +   t pp+  + +Gt
  EPX71632.1 132 LLCTKHSQ-LFDLVLALGGDGTVLYTSRLFQR---TVPPIMPFAMGT 174
                 44566666.68***********9655444444...555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (393 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       588  (0.032796); expected 358.6 (0.02)
Passed bias filter:                      506  (0.0282224); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 2655.76
//
Query:       EPX71633.1  [L=139]
Description: 60S ribosomal protein L32 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.8e-49  164.4   0.7    1.2e-48  164.0   0.7    1.2  1  Ribosomal_L32e  Ribosomal protein L32


Domain annotation for each model (and alignments):
>> Ribosomal_L32e  Ribosomal protein L32
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.0   0.7   6.7e-53   1.2e-48       1     108 []      23     130 ..      23     130 .. 0.99

  Alignments for each domain:
  == domain 1  score: 164.0 bits;  conditional E-value: 6.7e-53
                     ------TTTTT-TTS-SS------TT-TTTTT-TTS-----GGG---TTTTT--TTS-EEEEESSGGGGTT--TTTE..EEEE-TTS-HHHHHHH CS
  Ribosomal_L32e   1 tkkFirhqsdryvklkeswrkprGidnrvrrrfkgqilmpkiGYgspkktrgllpsGfkkvlVhnvkeLevllmenksyaaeiahsVsskkrkei 95 
                     tk F+rhqsdr+++++eswrkprGidn vrrrfkg i+mpkiGYg++kktr+++p+G+k +lV+nv+++e llm+nk+yaaeia++Vs++kr ei
      EPX71633.1  23 TKPFRRHQSDRFHRVGESWRKPRGIDNCVRRRFKGVIRMPKIGYGNNKKTRYCMPNGLKAFLVRNVADVELLLMHNKTYAAEIASNVSARKRVEI 117
                     689******************************************************************************************** PP

                     HHHHHHTT-EBSS CS
  Ribosomal_L32e  96 verAaelgikVtN 108
                     ve+A+ lg+kVtN
      EPX71633.1 118 VEKARALGVKVTN 130
                     ************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       434  (0.0242066); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 1003.80
//
Query:       EPX71634.1  [L=2638]
Description: eukaryotic protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   1.4e-126  423.2   7.4   2.3e-126  422.5   7.4    1.4  1  Fmp27_WPPW   RNA pol II promoter Fmp27 protein domain
     4e-126  421.7   6.0     4e-126  421.7   6.0    3.8  3  Apt1         Golgi-body localisation protein domain
    1.9e-70  238.1  28.1    2.9e-64  217.6  14.0    3.2  3  Fmp27        Mitochondrial protein from FMP27
      9e-52  175.3   0.0    2.1e-51  174.1   0.0    1.7  1  Fmp27_GFWDK  RNA pol II promoter Fmp27 protein domain
    2.1e-39  134.9   0.1    6.4e-39  133.4   0.1    1.9  1  DUF2405      Domain of unknown function (DUF2405)
    6.4e-26   91.1   2.7    2.9e-25   88.9   0.0    3.3  3  Fmp27_SW     RNA pol II promoter Fmp27 protein domain
  ------ inclusion threshold ------
      0.014   15.3   0.1      0.014   15.3   0.1    1.9  2  CheZ         Chemotaxis phosphatase, CheZ


Domain annotation for each model (and alignments):
>> Fmp27_WPPW  RNA pol II promoter Fmp27 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  422.5   7.4    9e-130  2.3e-126       1     482 [.    1550    2030 ..    1550    2031 .. 0.91

  Alignments for each domain:
  == domain 1  score: 422.5 bits;  conditional E-value: 9e-130
  Fmp27_WPPW    1 GlKakvdsfklDLHQRreelttvnkklnkqkkvsklkinegeidlksaDiRavsasfketsveeikesslsslsseqssessesdlsrfeipdnDls 97  
                  GlKakv++f++DLHQR e+++++nk   +++++++++++ +eid+k++D+Ra++asf+e ++e  k+   + l      + +++++ +f+ +++   
  EPX71634.1 1550 GLKAKVEHFSVDLHQRSEKHEMKNKAFGETQETTSMRVHLAEIDFKTIDLRAITASFDEGALETSKSIPVNAL------DGKDKESFSFRTVEGPSA 1640
                  9**********************************************************99998877776333......4455678889******** PP

  Fmp27_WPPW   98 WiDmdDFveldwiepeesnpkikilPLaysPrftYfRqtdegdkiqvdekris....pFgnektHdCilgkendpervqkelleeRleeleeqiekl 190 
                  W+D+dDF+e+dw +p + n k+ i+PLa+sPrftY+R+t+ + k +++ek+i     +Fg+ektH+C++  ++dp++vq+ell++R +el++++++ 
  EPX71634.1 1641 WVDIDDFHEADWLLP-QRNEKCAIYPLAFSPRFTYYRHTKPHMKNEKNEKKIVadtcRFGDEKTHRCMMPGHKDPKSVQCELLKKRRDELQQHMNSE 1736
                  ************999.8899**********************999999996667788**************************************** PP

  Fmp27_WPPW  191 eekleelelkseke.deelkeeieelekeikelkeklefletlledlkeseesseeeeskskelsaastsesfseldelasseesaseFknRFiihn 286 
                  +e++++le+ ++++ +++lkee+++l+k + +l++ +++l  lle++k++++               s+  s +   ++a+ +es++ F+nRF+ hn
  EPX71634.1 1737 NERIQTLEELTRTQsSSDLKEEFQSLKKRVLTLNDHYRLLGFLLENIKNNSK---------------SHVTSGQVDLSYATLSESVHAFNNRFVAHN 1818
                  ********99999667777777777777777777777777777777777664...............23333333344588999************* PP

  Fmp27_WPPW  287 iqlkwnnslRnillrylhqvsqrrgfvyymsrkavkfiedlveeqekskkkkskekeesseksssedeesneeleerieelledvkk.......... 373 
                  +q+kwnn +Rn++l+y+h++++ rgf+yyms+ka++f++dl +  e s ++           + s+++e++e+  ++++ lled k           
  EPX71634.1 1819 VQIKWNNFVRNAVLSYVHEMERVRGFAYYMSQKAIRFLQDLQKAPEISGDD--------YLGDGSDNNEEKENARNLLKFLLEDLKTkfvvktddla 1907
                  *******************************************99997774........445667777888999999999999998899999999** PP

  Fmp27_WPPW  374 ..............aeefeaqnsylvrLIaPQiqlqSeknpksvvlvtakdielkivsiedkervsddvsglverRfgvllddaqfFvlkkkdfskk 456 
                                ++++++ +sy++r+IaPQiqlq+++np+++v+++ +++++ki+si d +   +d++ lverRf+++++++qfF+++ +df  +
  EPX71634.1 1908 gksfpydnnteggsNTHYDIIQSYVFRFIAPQIQLQCNMNPRKAVIISIQSLQIKILSIIDPAFPVNDINYLVERRFLCKVNESQFFIADANDFRVS 2004
                  ***********************************************************************************************77 PP

  Fmp27_WPPW  457 sesllsgnkyGaekgssWpPWvplEv 482 
                  +  +l  nkyG+e++s WpPWvplE+
  EPX71634.1 2005 DSATLVLNKYGCESNSVWPPWVPLET 2030
                  777777*******************6 PP

>> Apt1  Golgi-body localisation protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   1.2     0.026        67      70     129 ..    1735    1795 ..    1727    1809 .. 0.74
   2 !  421.7   6.0  1.6e-129    4e-126       3     477 ..    2046    2480 ..    2044    2481 .. 0.87
   3 ?   -6.6   3.4         7   1.8e+04     332     374 ..    2557    2604 ..    2528    2621 .. 0.39

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.026
        Apt1   70 sePlekerserlekimlasdfsd.leglpemvkklqerirqleeikehfqieskyldkegw 129 
                  se ++ +  e+l +   +sd+++ +++l+++v +l +++r l  + e+ + +sk   ++g+
  EPX71634.1 1735 SENERIQTLEELTRTQSSSDLKEeFQSLKKRVLTLNDHYRLLGFLLENIKNNSKSHVTSGQ 1795
                  44444455566666667777776899****************8888888888886555555 PP

  == domain 2  score: 421.7 bits;  conditional E-value: 1.6e-129
        Apt1    3 qrtsaslrydkyntlrlkyndesvsseeeeeekrvdelsvefpklratanSsQYyalydivtdLLlysePlekerserlekimlasdfsdleglpem 99  
                  +r s s+ y+k+n+lrlk++ +s  +  e+ + ++d+l++++p+++++++SsQYy l+ i+t+LL+y+eP++k+rs+rle+imla+dfsdl+g+pem
  EPX71634.1 2046 HRVSFSVVYTKHNDLRLKETVRSRREFFEDLDIHTDTLTFDVPRVVFSTDSSQYYDLFTIITNLLVYKEPSQKQRSQRLEEIMLAADFSDLTGTPEM 2142
                  799*****************99888887777****************************************************************** PP

        Apt1  100 vkklqerirqleeikehfqieskyldkegw.edrlklekelaeceeeLfllmkaittsqlrkkekskskslsaalrwsisadeivWhlldddgepla 195 
                  v +lq+r++ lee+k + q+++ +++   + ++ l l++el++c eeLf+l+++i + q+r    +++++ +++l+w i+a+e+vWhll+d++ p++
  EPX71634.1 2143 VAMLQNRVHHLEEVKLQHQLYDVTFNIHAHiAQQLFLQNELHRCGEELFYLIESIASVQSRG---KNQNKTRCNLSWFIMANEVVWHLLEDNKRPFL 2236
                  ***********************99999999****************************765...556666699*********************** PP

        Apt1  196 elqLknaeydrtdnsdgsnsnrleigslqglNllpnaiypellspy....edepedkkkpmlrvywkmlepvgGipvlehfevnlfPlkiqLeeevg 288 
                  +++L+na+++r++n+d+sn n+lei+s++g Nl p   +++++ py     ++++  +++++r++w+  e+v+Gi+v++hfe+nlfPl++q+e+e++
  EPX71634.1 2237 DVSLQNATFRRIENTDSSNTNTLEIESMKGSNLAPGCQFENIICPYfnseFSNEQLLQQKFIRIHWELTEAVAGIQVVQHFEINLFPLSLQIEHELA 2333
                  ************************************************995578999**************************************** PP

        Apt1  289 kklfeYiFPkrdsdaqeasmvkessseeddesdeesessssssssssssassssssssrssslelrlkptsstssss.ssessssssskkrsseess 384 
                   klf++ FP+++++ +  s                           s+++++s++ ++   + +    p + ++++  +++ ss+++  ++  +   
  EPX71634.1 2334 SKLFDFAFPGNENKGNLFS-------------------------MYSNRTEDSNTTNKVVAEIT----PGHPSGNEDtAKNDSSQELGLEKYLD--- 2398
                  *********9885443321.........................11111112222222221111....11111111101122222222222222... PP

        Apt1  385 lessaservkssrasddleemksRaskymtfayikipsvvlclSYkgkkeknledvhdlvfrlPtleyrnktwsnldLalalKkdvikallsh 477 
                  le              +l+em +Ra ++m +ay+kipsv l+lSY+g ++  le+++ +vf +Pt+eyrn+++s+ldLa  +K+d i+++lsh
  EPX71634.1 2399 LE-----------GRSELHEMLNRAGNNMLIAYFKIPSVMLRLSYRGTSSLGLENITGFVFSVPTIEYRNEVCSYLDLAVWIKRDLIRSVLSH 2480
                  33...........7899**************************************************************************** PP

  == domain 3  score: -6.6 bits;  conditional E-value: 7
        Apt1  332 ssssssassssssssrssslelrlkpt......sstssssssessssss 374 
                    s++s++s+s++ +  +s +++l          ++++s +s+++ss+ 
  EPX71634.1 2557 IGSTRSSESQSRFWEYHGSRSKKLA-GiikrhiPHAKKSAKSRMKSSEG 2604
                  2222222223333333333333322.02333442222222222222222 PP

>> Fmp27  Mitochondrial protein from FMP27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  217.6  14.0   1.1e-67   2.9e-64       2     690 ..      28     643 ..      27     649 .. 0.88
   2 !   30.5   0.2   4.1e-11   1.1e-07     757     875 ..     676     780 ..     652     782 .. 0.85
   3 ?   -3.6   1.6      0.83   2.1e+03     232     303 ..    1726    1788 ..    1716    1830 .. 0.47

  Alignments for each domain:
  == domain 1  score: 217.6 bits;  conditional E-value: 1.1e-67
       Fmp27   2 lasivllllirlitgisikrigylslrritittkd.vkIeIrslrlrl....fanptwlridnlelldvrvskkkdrekkseeskseepedksksnsnl 95 
                 l+ +v++ ++ +   + + r+g+ s++++++t+ + ++++I+++++r+    ++np+ ++++  +l +  v+ ++dr+   e+++s+   +    ns +
  EPX71634.1  28 LLVHVFFWVLAYCFKWPFTRFGFGSIYGLRHTFANgQRVSISYIGIRIrrpsTSNPHFISLVIKGLNYNLVTGNDDRTVVRESKSSTASGS----NSTR 122
                 77899****************************************************9999988866666656666666666666666666....8889 PP

       Fmp27  96 keklsltppkellkrlvrtllriinavdihirntsisdedvhetiigslsltvderkkkvdr........eeekaefeilvrnveftvdg..keaeild 184
                 ++ ls  +    +k+l  +  r+i+++++ +++ +i++++v++ +ig ls  v +++++           + ++++f++ + n+++ +d+  k  +i+d
  EPX71634.1 123 SRNLSSVLGELEQKWLRFLNTRWIKWIHVSLQDAQINIPSVGTLEIGNLSTEVLSSRNTLGIensmskdmKGSCVDFSLRILNLLY-IDCegKNRQITD 220
                 999998888888887777778********************************9999554449999****999*******999999.99995555**** PP

       Fmp27 185 ectlslkgklsidl...sggLrdlevslklgrlnipld.dlenlvkqlkkskeekdeesvkaeerdeksledqseeleepgskdekkvekvakslelvs 279
                  +++++ + +s++    + +L+ ++ s+k+g l i ld +l  ++kq ++s +  +                            e  ++ v+   + ++
  EPX71634.1 221 FLDINITSQFSTNEystPASLTKFRCSVKFGILCIDLDgPLFGFLKQEQSSSSAFK----------------------------EDSSTLVK---DSFE 288
                 **************************************777566666555544433............................33455555...8888 PP

       Fmp27 280 sllrliseiqikvenlglsdipfsslddlssvsdyvsakevslnlsrldkksPgfkmlfkpddipvqlllaltslkvsldknshkedeileIPsatltg 378
                  ++  +seiqi++  l+l++++++ l +++     ++ ++++ +l  l++ksP+++m+f  + i +q+l++++s++++  + +h ++ +l+IP +t+t+
  EPX71634.1 289 AFIVKLSEIQIQIGSLKLWKRNMTGLGATYV----FNGSDLGCTLNLLNMKSPSHRMFFSAETIVHQILASILSFNIENYTPGHPPHYLLNIPLVTVTC 383
                 9*****************************9....**************************************************************** PP

       Fmp27 379 ktnllsktvssdtvtakefqnlilelnltlssPtiDldheqlslllsllknikllkkskslkkkkksrrllsllsellpkvnlKfsieepvlrihlpek 477
                  t++l +++    +t+++ + + l++n+tl+sP++D+++e l+ + sl++     + +++l ++k         + ++p++++  s++epv+r++  ++
  EPX71634.1 384 LTSTLGQYA-IYPNTPEKLRESSLRINSTLTSPSLDIRLELLHDVMSLFQ---KKEATPTLERSKT-------PYLYFPETKVSMSLYEPVVRFMISSE 471
                 *****9998.59999999999*****************************...3344444444444.......488*********************** PP

       Fmp27 478 gksk.fnllissisvlsfdlesshtdyasesellyklitrlelsssqlyysnnkgvkheilkldslelkvqlnllpnlkvkasgslnt....lsldlse 571
                 ++s+ + ++ +++s++ + ++     y  + e+++ ++++l+l+s  + y+++++ k+ i +++ ++l+     + ++  +  g++++    +++++ e
  EPX71634.1 472 SESHfPGMIVANLSSMFLEFK-----YLISLEHVFAIYSSLRLASNHVLYHSPENRKWLINSSEMITLS-----FNYFYNNNFGNVDLfldeFKIRIEE 560
                 *********************.....777****************************************.....788888888888888888******* PP

       Fmp27 572 leilkgindvvrqlrrqvrnrlnlsveqkyfndeikekredltnseekesenstlkeklfrrlPswlsslkfelsslsldlgcrsvlipkiiydstlde 670
                 +e++k++++++   r+q  +r+                      +++++   s+ +  l+ ++Pswl+sl +  ss+ +++ +              ++
  EPX71634.1 561 EEVVKSLKKFLILWRSQK-PRK----------------------DINESVDGSDMSVPLLFKIPSWLKSLRIRGSSIFFIVKA-------------IRR 623
                 ************999665.222......................22222223678**********************999999.............*** PP

       Fmp27 671 evsdfsrgvslklrklsvey 690
                 e+sd+ rg++++++ + +++
  EPX71634.1 624 EISDDPRGINCHVDQFDGSF 643
                 *************9987766 PP

  == domain 2  score: 30.5 bits;  conditional E-value: 4.1e-11
       Fmp27 757 srpflsLpsfdikvstlsdksgpklrlnleikeidgryslfklfciiyalsllksffpkpiktvkrksskdevqelskpstkvkkdkkslkellkldvk 855
                  ++ l++p+ +++ stl ++++  +rl++ei   +g +sl + +c++ya+   + +f+    ++ r++++++v++ +++            + l++d++
  EPX71634.1 676 EHLLLKVPKSSFTYSTLFNDQTRSSRLTMEIGVLRGYLSLLHNCCLLYAYKATRFIFS---DENSRNTKEKPVSRKKSS-----------LDGLTFDLR 760
                 37899*****************************************************...333344444444444444...........6******** PP

       Fmp27 856 lksiavivrLpndvplllei 875
                 +++ +++++L++d +lll++
  EPX71634.1 761 ITNTRLKFDLDDDINLLLDL 780
                 *****************997 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 0.83
       Fmp27  232 keekdeesvkaeerdeksledqseeleepg..skdekkvekvakslelvssllrliseiqikvenlglsdipfs 303 
                  ++e +++   ++er +         lee    ++++  +e ++++++ v  l ++++ + + +en++    + +
  EPX71634.1 1726 RDELQQHMNSENERIQ--------TLEELTrtQSSSDLKEEFQSLKKRVLTLNDHYRLLGFLLENIK---NNSK 1788
                  3333333322222222........3333334456677777777777777777777777777777777...1122 PP

>> Fmp27_GFWDK  RNA pol II promoter Fmp27 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  174.1   0.0   8.3e-55   2.1e-51       1     156 []    1136    1292 ..    1136    1292 .. 0.97

  Alignments for each domain:
  == domain 1  score: 174.1 bits;  conditional E-value: 8.3e-55
  Fmp27_GFWDK    1 DYplplvhvp...seqskslkalklkgdlviaEelveseeslRkievplvpsaeaeeeesfysvtvertltsvKlysdlevdiesseptrltWGks 93  
                   DYplplv +p   ++q+k+l+++++k+++vi+E+l +s e++R+++vp++ sa+++ +   y+v+v+rt++++K++sd ++di++s p+ + WG+s
   EPX71634.1 1136 DYPLPLVYIPrlgQNQNKDLTSWHFKSNFVITEQL-ASLEAIRDVTVPVI-SAKESCSGLPYAVNVTRTVSPIKTFSDSHIDINTSLPVFVLWGTS 1229
                   9**********************************.889***********.5666666889*********************************** PP

  Fmp27_GFWDK   94 yqpaiqqvmqaldkftkppvDpSpklgfWDKirllfhgkielkvkkdgelelalkgsrdPYki 156 
                   yqpai+++ +++d+ftk p+D S++lgfWDK+rl++h+++++++ ++g++ l++kgsrdPY i
   EPX71634.1 1230 YQPAITDIIRIIDTFTKIPIDTSDRLGFWDKLRLVAHSRLRFRWLENGDIFLSIKGSRDPYMI 1292
                   *************************************************************87 PP

>> DUF2405  Domain of unknown function (DUF2405)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.4   0.1   2.5e-42   6.4e-39       2     150 ..     799     946 ..     798     949 .. 0.97

  Alignments for each domain:
  == domain 1  score: 133.4 bits;  conditional E-value: 2.5e-42
     DUF2405   2 klirlyvesptvkkvwarllsikdlrvdlrekkseeeksidveteairlriPhkfvvykiidniittvKaikqlkhrfktskneevlepkeekpkklPk 100
                 k++++++++p+v+++w++++ + d+++++    ++ +k + v+++ i lriPhkfv + +i++ i+tvKa+ +++ +  t ++++ l+++ ++p+ +P+
  EPX71634.1 799 KFMQIHTRNPDVPELWDKMFALGDFHYRIAG-FESPRKLHLVTCDYISLRIPHKFVPFLVIESAINTVKAAIRVSSKPITIDEQHELAQQGKRPRVVPH 896
                 7899**************************9.99999999*********************************************************** PP

     DUF2405 101 iklkskrllfeleDDpFEaeLglIyriGlvEqkeRlakeeaFeekvkkir 150
                 +++ks +++fel+DDpFE++L++IyriGl+Eqk+R+ +++aFee+++ +r
  EPX71634.1 897 VNVKSTNFKFELDDDPFETRLSMIYRIGLTEQKMRMDRWSAFEERLRLLR 946
                 ********************************************998776 PP

>> Fmp27_SW  RNA pol II promoter Fmp27 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.9   0.0   1.2e-28   2.9e-25       2     102 ..    1017    1117 ..    1016    1118 .. 0.98
   2 ?   -2.8   0.1       4.1     1e+04      10      78 ..    1538    1606 ..    1536    1611 .. 0.45
   3 ?   -0.2   0.4      0.65   1.7e+03      18      70 ..    1730    1784 ..    1724    1788 .. 0.68

  Alignments for each domain:
  == domain 1  score: 88.9 bits;  conditional E-value: 1.2e-28
    Fmp27_SW    2 rerLqehnsksWirrikaakekqkeeikeirerlygkeelskedkdknekilplpkrppLlrltiedldleldkpsfpledlpdFlhdvGkGvPkdt 98  
                   + Lqe+ s sWi++i++++e++ ++ + +r   + +e+  +++ + +ek++p+p rppL++++++ +d++ldkp+fpledlp+Fl++vG+G+P+d+
  EPX71634.1 1017 CQLLQEYDSLSWISNIRRIREFRYNRLHVRRMIDWPDEDSLEKSIHLDEKLIPVPVRPPLADISFNGFDFTLDKPTFPLEDLPKFLNKVGSGQPLDY 1113
                  688********************************************************************************************** PP

    Fmp27_SW   99 eYsl 102 
                   Ys+
  EPX71634.1 1114 GYSI 1117
                  ***8 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 4.1
    Fmp27_SW   10 sksWirrikaakekqke..eikeirerlygkeelskedkdknekilplpkrppLlrltiedldleldkpsf 78  
                  sk+W  +  +a   + +  +++   ++  +k+e   ++k + e+  + + r +L+++ ++ +dl    +sf
  EPX71634.1 1538 SKNWQDKTASATGLKAKveHFSVDLHQRSEKHE--MKNKAFGETQETTSMRVHLAEIDFKTIDLRAITASF 1606
                  556666654443333330022222222222222..233333333455666666666666666666655555 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.65
    Fmp27_SW   18 kaakekqkeeikei..rerlygkeelskedkdknekilplpkrppLlrltiedld 70  
                  ++++++++e+i+ +    r   +++l++e ++ ++++l+l+++  Ll +++e+++
  EPX71634.1 1730 QQHMNSENERIQTLeeLTRTQSSSDLKEEFQSLKKRVLTLNDHYRLLGFLLENIK 1784
                  556666666666662223334444556666677777***********99999875 PP

>> CheZ  Chemotaxis phosphatase, CheZ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.2       2.8   7.2e+03      71      90 ..    1749    1768 ..    1720    1793 .. 0.51
   2 ?   15.3   0.1   5.5e-06     0.014      91     134 ..    2096    2139 ..    2063    2173 .. 0.82

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 2.8
                  XXXXXXXXXXXXXXXXXXXX CS
        CheZ   71 keeakeleeewerllerele 90  
                  ++++++l+ee+++l++r l+
  EPX71634.1 1749 TQSSSDLKEEFQSLKKRVLT 1768
                  12334444444444444443 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 5.5e-06
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        CheZ   91 keefrelvkeveaflkeveektealkkqLleilmaQdfqDLtGQ 134 
                  ++++ +l + ++++l   e + ++ +++L ei++a df DLtG 
  EPX71634.1 2096 SSQYYDLFTIITNLLVYKEPSQKQRSQRLEEIMLAADFSDLTGT 2139
                  567778888889999999999999*******************4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2638 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       942  (0.0525406); expected 358.6 (0.02)
Passed bias filter:                      567  (0.0316247); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 1.37u 0.36s 00:00:01.73 Elapsed: 00:00:00.54
# Mc/sec: 14648.12
//
Query:       EPX71635.1  [L=930]
Description: WDR44 family WD repeat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.4e-27   93.8   6.9    2.7e-05   24.8   0.2    7.7  8  WD40         WD domain, G-beta repeat
    9.9e-05   22.6   0.0       0.34   11.2   0.0    4.3  5  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
  ------ inclusion threshold ------
      0.012   15.7   0.3        4.2    7.4   0.1    4.1  5  BBS2_Mid     Ciliary BBSome complex subunit 2, middle region
       0.28   10.9   1.3        3.3    7.5   0.1    2.5  2  zf-RRN7      Zinc-finger of RNA-polymerase I-specific TFIIB, 


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   1.9e-07   0.00084      12      37 ..     333     359 ..     319     360 .. 0.86
   2 !   24.8   0.2   6.1e-09   2.7e-05       3      37 ..     395     429 ..     393     430 .. 0.87
   3 !   20.0   0.5     2e-07    0.0009       3      38 .]     436     472 ..     434     472 .. 0.81
   4 !    7.3   0.0    0.0021       9.3       9      28 ..     479     503 ..     475     509 .. 0.85
   5 ?   -1.1   0.0      0.97   4.4e+03      20      38 .]     553     570 ..     529     570 .. 0.75
   6 !   12.9   0.0   3.6e-05      0.16       6      38 .]     579     614 ..     575     614 .. 0.78
   7 ?   -3.3   0.0         4   1.8e+04      12      31 ..     637     657 ..     626     658 .. 0.55
   8 ?    3.7   0.0     0.029   1.3e+02      20      37 ..     698     715 ..     683     716 .. 0.81

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 1.9e-07
                 S.EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  12 s.vtslafspdgawlasGsdDgtvriW 37 
                 + +++++fs+dg++la G+ D+ +r+W
  EPX71635.1 333 CaIWAMKFSRDGRFLAVGGQDNILRVW 359
                 2499*********************** PP

  == domain 2  score: 24.8 bits;  conditional E-value: 6.1e-09
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 +++ + GH  ++ ++++s+++ +l+ +s+D+tvr+W
  EPX71635.1 395 PVQQYVGHtADILDISWSKNNFLLS-SSMDRTVRLW 429
                 788999**888*********99885.677******* PP

  == domain 3  score: 20.0 bits;  conditional E-value: 2e-07
                 EEEEEESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 
                 cl  ++ H ++vts+af+p  + + +sGs D+++r+W+
  EPX71635.1 436 CLCCFE-HsDFVTSIAFHPKDDRFfLSGSLDCKLRLWS 472
                 777775.9555*****9999999626***********5 PP

  == domain 4  score: 7.3 bits;  conditional E-value: 0.0021
                 SS.SS....EEEEEEETTSSEEEEE CS
        WD40   9 GH.ss....vtslafspdgawlasG 28 
                 +H +     +t++afspdg + ++G
  EPX71635.1 479 AHwNElpelITAVAFSPDGGLAIAG 503
                 6766678889**********98888 PP

  == domain 5  score: -1.1 bits;  conditional E-value: 0.97
                 TTSSEEEEEETTSEEEEEE CS
        WD40  20 pdgawlasGsdDgtvriWd 38 
                  d  +l++   D  +r+++
  EPX71635.1 553 GDTEMLVTTN-DSRIRVYN 570
                 5666788766.******97 PP

  == domain 6  score: 12.9 bits;  conditional E-value: 3.6e-05
                 EEESSSSEEEEE.....EETTSSEEEEEETTSEEEEEE CS
        WD40   6 tltGHssvtsla.....fspdgawlasGsdDgtvriWd 38 
                 +++GH   + ++     f+ + + +++Gs+D+ v+iW+
  EPX71635.1 579 KFKGH--LNEQSqnkssFDEELKHVICGSEDHQVYIWN 614
                 57888..6666556766777777799***********8 PP

  == domain 7  score: -3.3 bits;  conditional E-value: 4
                 SE.EEEE.EETTSSEEEEEETT CS
        WD40  12 sv.tsla.fspdgawlasGsdD 31 
                 ++ t++   s+ +++l+s++ D
  EPX71635.1 637 PItTAIFvPSRTKQLLLSAG-D 657
                 46333335666677788888.6 PP

  == domain 8  score: 3.7 bits;  conditional E-value: 0.029
                 TTSSEEEEEETTSEEEEE CS
        WD40  20 pdgawlasGsdDgtvriW 37 
                  +g+ +++G+ Dg +r++
  EPX71635.1 698 NNGHIIVCGDLDGRIRVF 715
                 46777999989*****97 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0   7.5e-05      0.34      36      67 ..     330     361 ..     314     366 .. 0.81
   2 ?   -0.3   0.0       0.3   1.3e+03      38      74 ..     403     438 ..     396     451 .. 0.70
   3 ?    3.9   0.0     0.014        64      39      77 ..     444     483 ..     439     496 .. 0.80
   4 ?   -4.1   0.0         4   1.8e+04      53      70 ..     557     574 ..     554     581 .. 0.75
   5 ?    0.3   0.0      0.19   8.6e+02      48      65 ..     698     715 ..     667     725 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 7.5e-05
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrllda 67 
                    +  + +++++ dg++Lav+ +d+ +r+ ++
   EPX71635.1 330 PLNCAIWAMKFSRDGRFLAVGGQDNILRVWQV 361
                  45678999******************999876 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.3
  ANAPC4_WD40  38 dsevrsLaWkpdgklLavaysdgevrlldaesgkvvh 74 
                     + +++W++++ +L  +  d +vrl +   ++++ 
   EPX71635.1 403 TADILDISWSKNN-FLLSSSMDRTVRLWHPLRKDCLC 438
                  5678899999875.66667778889988876666665 PP

  == domain 3  score: 3.9 bits;  conditional E-value: 0.014
  ANAPC4_WD40  39 sevrsLaWkp.dgklLavaysdgevrlldaesgkvvhsls 77 
                    v+s+a++p d++++  +  d ++rl ++++++v h  +
   EPX71635.1 444 DFVTSIAFHPkDDRFFLSGSLDCKLRLWSIKDKNVAHWNE 483
                  56999***9846789999**************99998655 PP

  == domain 4  score: -4.1 bits;  conditional E-value: 4
  ANAPC4_WD40  53 Lavaysdgevrlldaesg 70 
                  + v ++d+++r+++  ++
   EPX71635.1 557 MLVTTNDSRIRVYNLRDK 574
                  567888999999887765 PP

  == domain 5  score: 0.3 bits;  conditional E-value: 0.19
  ANAPC4_WD40  48 pdgklLavaysdgevrll 65 
                  ++g++++ +  dg++r++
   EPX71635.1 698 NNGHIIVCGDLDGRIRVF 715
                  689************987 PP

>> BBS2_Mid  Ciliary BBSome complex subunit 2, middle region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       1.9   8.5e+03       3      28 ..     336     360 ..     334     361 .. 0.75
   2 ?   -1.0   0.0       0.4   1.8e+03      66      78 ..     465     477 ..     406     481 .. 0.62
   3 ?    7.4   0.1   0.00095       4.2       8      37 ..     552     579 ..     547     587 .. 0.83
   4 ?   -1.2   0.0      0.46   2.1e+03       9      28 ..     596     614 ..     591     627 .. 0.80
   5 ?    2.1   0.0     0.043   1.9e+02      14      40 ..     702     728 ..     694     736 .. 0.72

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 1.9
    BBS2_Mid   3 aladvdgdgeneLvvgsddfeirvfk 28 
                   +++ +dg + L vg +d+ +rv++
  EPX71635.1 336 WAMKFSRDG-RFLAVGGQDNILRVWQ 360
                 567777774.5799999999999975 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.4
    BBS2_Mid  66 ekkerlWrvkskn 78 
                 + k rlW++k kn
  EPX71635.1 465 DCKLRLWSIKDKN 477
                 3456777777776 PP

  == domain 3  score: 7.4 bits;  conditional E-value: 0.00095
    BBS2_Mid   8 dgdgeneLvvgsddfeirvfkeeelvaeit 37 
                    g++e++v ++d +irv++  +  +ei+
  EPX71635.1 552 A--GDTEMLVTTNDSRIRVYNLRDKSFEIK 579
                 4..559**************9988888876 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 0.46
    BBS2_Mid   9 gdgeneLvvgsddfeirvfk 28 
                 + + ++++ gs+d ++ +++
  EPX71635.1 596 E-ELKHVICGSEDHQVYIWN 614
                 4.368999*****9998875 PP

  == domain 5  score: 2.1 bits;  conditional E-value: 0.043
    BBS2_Mid  14 eLvvgsddfeirvfkeeelvaeitete 40 
                  +v g  d +irvf+++      + + 
  EPX71635.1 702 IIVCGDLDGRIRVFRQDCSFEARNSQR 728
                 3556667********997766655555 PP

>> zf-RRN7  Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.1   0.00073       3.3       2      16 ..     882     896 ..     881     897 .. 0.90
   2 ?    1.6   0.1     0.051   2.3e+02       6      17 ..     912     923 ..     908     926 .. 0.61

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.00073
     zf-RRN7   2 ekgppCgvCgcrsft 16 
                 ++++ C+ Cg+++f+
  EPX71635.1 882 RDRMECAKCGNYLFY 896
                 6899**********9 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.051
     zf-RRN7   6 pCgvCgcrsftl 17 
                  C  Cg +++++
  EPX71635.1 912 TCSHCGQKLYAP 923
                 466666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (930 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1193  (0.0665402); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.72u 0.32s 00:00:01.04 Elapsed: 00:00:00.55
# Mc/sec: 5050.58
//
Query:       EPX71636.1  [L=616]
Description: transcription factor, partial [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.7e-38  131.5   0.0    5.2e-38  130.6   0.0    1.5  1  Fungal_trans  Fungal specific transcription factor domain
      0.005   16.9   5.4     0.0095   16.0   5.4    1.4  1  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain
  ------ inclusion threshold ------
      0.089   12.5   0.3        4.1    7.0   0.1    2.3  2  Endotoxin_N   delta endotoxin, N-terminal domain


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.6   0.0   8.7e-42   5.2e-38       1     266 [.     144     392 ..     144     393 .. 0.88

  Alignments for each domain:
  == domain 1  score: 130.6 bits;  conditional E-value: 8.7e-42
  Fungal_trans   1 ldrffsnfhpqfpilhkpsflpktssenssksayaspllllailalGalfsesetkesnssltsesqefiafplraeilihedfsspssslwilqsL 97 
                   l++ff++ + qf +++++ fl ++ ++  ++ +y+s++ll+a++alG++++++++  ++s++           l++++l   ++   +++++++q+L
    EPX71636.1 144 LKLFFKWQYTQFMYINREAFLLDY-YHHYHDGRYCSEHLLYAMCALGSRMAPEAEVVNSSDKYYR--------LSWDTLM--EYGLGRPHITSVQCL 229
                   799*********************.********************************96666664........5******..*************** PP

  Fungal_trans  98 lllelyektssdralherhhgvavrlarslgLhrnpsyvgkkslwklweeeaesrrRlwwaaFylDktialklGrppllddsqinlp....LPcddd 190
                   l+l +y +++++++l ++++g+a+r+ ++lg++ +p  +   ++++ ++e+a  r R++w+ ++ D++i+++lGrp++l++s++++p    LP+ d 
    EPX71636.1 230 LCLGFYDIGMGNNSLGWLLSGLAFRMGQDLGFQLDPRKWFMNEIPVISAEDAAVRSRIYWGSYVADVFISFILGRPTTLKKSDTSIPgsvnLPDFDG 326
                   ****************************************999**********************************99********7776776555 PP

  Fungal_trans 191 dlwesddaseetlvetklsneeksrkiasfllaLkkilskiagsllsiekqlqqrdlqseklswveeleraldnWr 266
                    ++e   + +   +      + +   + + l++L++i   i+  ++s++ +    + +   l+++ + + +l++W+
    EPX71636.1 327 -IDEFKCDLGPAAK------PATLFVMLLLLVDLSHIADAILFDVFSPSDFPYGINAR---LQNLGKYNLELMKWY 392
                   .4444333333333......35777888888888888888666688888888888888...888888888888885 PP

>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   5.4   1.6e-06    0.0095      11      35 ..       1      24 [.       1      29 [. 0.84

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.6e-06
                ---STSSSS-HHHHHCTHHHCCCCT CS
     Zn_clus 11 vKCdakkPaCsnCkklnleCtfyse 35
                +KCd+k P C+nC  l+ +C  ++ 
  EPX71636.1  1 IKCDRKSP-CTNCTHLGEQCIHKNL 24
                7*******.***********95554 PP

>> Endotoxin_N  delta endotoxin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.1   0.00069       4.1      47     100 ..      18      71 ..      11      83 .. 0.91
   2 ?    3.1   0.0     0.011        67     104     199 ..     455     553 ..     437     566 .. 0.74

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.00069
  Endotoxin_N  47 dlidnsltqyddnklkallkglslslkdfrkevknlkadPknaalksavnvlyl 100
                  + i ++l++ ++ + +  +++l+++l++ ++    lk  P+n+ lk    v++ 
   EPX71636.1  18 QCIHKNLDNRKKRHPHSYVQALESQLATMESFLMKLKDSPTNERLKMLESVTFA 71 
                  67999*****************************************98888875 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.011
  Endotoxin_N 104 ndietkylkdlrkegyeieelplfvlmAt....ahLllLkeaivkgkewgisdskvkifidkfkksivdy..aeycktayekGlakikkeeakikdtv 195
                  +di ++ lk   ++ +  e ++lf + A+      L++Lk++++  +   i+ +k + fi  ++ks + +  a +++t+ e+ l+  ++++a  ++++
   EPX71636.1 455 EDI-SQLLKS-YRDAFGFESASLFMVYAAivscSVLIMLKNSSIISERLDIE-EKLRFFIMVLQKSSKSWklAAKSLTLIETSLKDESNPTADESSAL 549
                  566.344444.5778888888888776652222579***************9.899999999999876542277788888888888777777777766 PP

  Endotoxin_N 196 kqyn 199
                   + n
   EPX71636.1 550 PNLN 553
                  6665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (616 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       515  (0.0287244); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.29s 00:00:00.85 Elapsed: 00:00:00.43
# Mc/sec: 4290.58
//
Query:       EPX71637.1  [L=549]
Description: MFS family membrane transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.2e-32  111.4  31.8    4.2e-32  111.4  31.8    1.5  2  MFS_1     Major Facilitator Superfamily
     0.0027   16.6  33.1      0.017   14.0  33.1    2.1  1  Sugar_tr  Sugar (and other) transporter
  ------ inclusion threshold ------
       0.11   12.2   0.0       0.17   11.6   0.0    1.2  1  DUF2859   Protein of unknown function (DUF2859)


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.4  31.8   7.1e-36   4.2e-32       2     346 ..     116     492 ..     115     501 .. 0.78
   2 ?   -0.3   0.1     0.065   3.9e+02     216     254 ..     487     530 ..     475     540 .. 0.58

  Alignments for each domain:
  == domain 1  score: 111.4 bits;  conditional E-value: 7.1e-36
       MFS_1   2 llaaflsalarsilgpalplalaedlgispseigllltl.yalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslwlllvlrvlqGlga 99 
                 +++++++++++si+++ +    a++l++s+ + +++ ++ + +g++++slp+++ls  +Gr  v++l+lllf ++ + +  a+++w++++lr++qG+++
  EPX71637.1 116 SIITIVVTFGSSIYSSGVE-QAAHELHASVPV-STVGSCtFLVGFGFGSLPFAPLSGIYGRFIVYFLTLLLFTIFQIGGGCAQNIWTICILRFFQGVFG 212
                 68999*************9.899****88886.6666665888********************************5555545***************** PP

       MFS_1 100 galfpagaaliadwfpkeergraigllsagfslGailgpllgglla.sslgWravfyilaivsllafvlfllllpeepperkrkspkeee......... 188
                 ++ +++++  i+d+f++ +r+ ++  + ++  lG+i+gp+ g +++ s+lgWr++f+i+ i ++  + l+++l+pe++ e   + +++ +         
  EPX71637.1 213 STPLANAGGTISDMFNPIQRTYVLPGFCTFPYLGPIIGPIMGDFIVqSYLGWRWLFWINMIWAAGTLALIFFLFPETHGETILDYKARYLrkvtgnpay 311
                 ******************************************************************999999999999999999888888999999999 PP

       MFS_1 189 ..........kgtgpaplvp....awkallkdpvlwillialllfffgfsglltllplylqevlgls.glllaglllallalvgailallagrlsdr.. 270
                           k     ++++      +++l+ p +  +++  l++  +++++ +    ++ + +g++ g  l++  + ++  vg+++a l++ l  +  
  EPX71637.1 312 ytihererdpK----NAIFKaatqSVSLFLTEPIVV-CFTLYLTVVYIINYINFEGYPIIYSKYGFNyG-ELGL--SFIAVGVGIVVAGLLTPLTYKqy 402
                 99988854442....444444444689999999443.44444444444444444444445899999954.4444..33333344334445555554457 PP

       MFS_1 271 ..........lgrrrrlllallllllaalglallavt...ssavllll..vlvliGf.glgfvfpsllalasdlappeeagtasglfntags 346
                           + ++ rl+  +++++++ +++++la+t   +  ++++   ++ ++Gf  l ++f+s++++++++   + a +a+++++++++
  EPX71637.1 403 lwayrrrgnvMCPEDRLYPLFIGAFVLPISMFWLAWTcyaDRIHWIVPmiASSFFGFaLLIVFFVSYNYIIDSYQ--HIAPSALAAATVVRY 492
                 7776666666666************************99866666666335555999666666777777777766..888888888886665 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.065
       MFS_1 216 lllfffgfsg..lltllplylqevlgls....glllaglllalla 254
                 + ++  + sg  +l+  p+yl+   +++    g +++++++++++
  EPX71637.1 487 ATVVRYCASGgvTLAARPMYLNLGDHWAtsvlG-FISVAMVPIPF 530
                 333333444456788888899999999954444.33333333333 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0  33.1   2.8e-06     0.017      16     437 ..     115     533 ..     104     539 .. 0.73

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 2.8e-06
                 HHCGGGTHHHHHHHHTSTT--SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHH CS
    Sugar_tr  16 tgvigafltllkfaknfglsksksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvGi 114
                 t +i  ++t+ + ++  g++++  +  +s   s++  + flvG  +Gsl + +l+ ++GR  ++  + +lf i ++  ++a+   +++ +++ R++ G+
  EPX71637.1 115 TSIITIVVTFGSSIYSSGVEQAAHELHASVPVSTVGSCTFLVGFGFGSLPFAPLSGIYGRFIVYFLTLLLFTIFQIGGGCAQ---NIWTICILRFFQGV 210
                 5667777788888888888888888888999***************************************************...************** PP

                 HHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHHHHH.HHHHHGGGS---HHHHHHTT-HHHHHHHHH CS
    Sugar_tr 115 gvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglglnktsnadgwrillglqlvpal.lllilllflPESPrylvekgkeeeakevla 212
                 +  +  + +  +is +  +  R ++   + ++  +G +++ i+g ++ ++    gwr+l+++++++a  +l+++++++PE+       +  +   + l+
  EPX71637.1 211 FGSTPLANAGGTISDMFNPIQRTYVLPGFCTFPYLGPIIGPIMGDFIVQSYL--GWRWLFWINMIWAAgTLALIFFLFPET----HGETILDYKARYLR 303
                 *******************************************999855555..6***********862566666778***....44444556667788 PP

                 HHHHCHHHHHHHHHHHHHHHHHHH.....HTTHHHHSH...HHHHHHHHHHHHHHTTHHHHHHHT.TTHHHHSS-THH.....HHHHHHHHHHHHHHHH CS
    Sugar_tr 213 klrgeedadrelaeekdsleaeqeeekaswkellssktvrqrlligvvlqifqqltGinaimyys.ptifenlglsks.....llvtiivgvvnfvatf 305
                 k+ g++      + e d  +a  ++ ++s++ +l++     ++++ + +  ++ +  in+i + + p i+++ g++       +++ ++ +vv  + t 
  EPX71637.1 304 KVTGNPAYYTIHERERDPKNAIFKAATQSVSLFLTE-----PIVV-CFTLYLTVVYIINYINFEGyPIIYSKYGFNYGelglsFIAVGVGIVVAGLLTP 396
                 888888887777888888888877778888888888.....4444.44444555555666665543777888888888654432222222223333333 PP

                 HHH....HHHHHS-SHHHHHHH...........HHHHHHHHHHHH..HHHHTTSS...CHHHHHHHHHHHHHHHTTTTHHHHHHHHHH..SHTTTHHHH CS
    Sugar_tr 306 vai....flvdrfGRRtllllG...........aagmaicfvilgivalllvakskaasivaivfialfialfalgwgpvpwvlvsEl..fpqsvRska 387
                        +      RR+  +++           a++  i ++ l+     +         +  +  ++   +f++ +  v++v    +  + q++ ++a
  EPX71637.1 397 LTYkqylWAY----RRRGNVMCpedrlyplfigAFVLPISMFWLA--WTCYA------DRIHWIVPMIASSFFGFALLIVFFVSYNYIidSYQHIAPSA 483
                 3321111344....4445555555553332111555555555554..33333......33444444444455666666666666665522468999999 PP

                 HHHHHHHHHHHHHHHHHHHHHHHCHHHT-HHHHHHHHHHHHHHHHHHHHS CS
    Sugar_tr 388 laiavavnwlanflisllfpiiteaigggyvflvfaglavlfiifvfffv 437
                 la a++v   a+  ++l    +  ++g  +   v +++ v+++ + f+f+
  EPX71637.1 484 LAAATVVRYCASGGVTLAARPMYLNLGDHWATSVLGFISVAMVPIPFIFY 533
                 99999999999999999999999999989988888888888888888886 PP

>> DUF2859  Protein of unknown function (DUF2859)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   2.9e-05      0.17      11      81 ..      23      94 ..      20     147 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2.9e-05
     DUF2859 11 pyyealnaqeaes.kpakesesaevpesaaaavkeaallPvespelspGkvearklelpglqplfliGdDal 81
                p++e  +  ++++ + a ++++++ +++ +++v+ +a lP++ + l+ G+ + ++++ + ++  +l+  D++
  EPX71637.1 23 PFLERNELPKENEsDGAVAANQTTLSREDKSVVSLGASLPLRQNDLEKGESDFHVVNKNSVEDPYLVTWDSV 94
                8888888888777799999999999999999***************************99988889988865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (549 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       615  (0.034302); expected 358.6 (0.02)
Passed bias filter:                      267  (0.0148921); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.24s 00:00:00.81 Elapsed: 00:00:00.40
# Mc/sec: 4128.39
//
Query:       EPX71638.1  [L=343]
Description: 2-dehydropantoate 2-reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-33  116.0   0.0    1.7e-33  115.4   0.0    1.3  1  ApbA             Ketopantoate reductase PanE/ApbA
    6.7e-29  100.6   0.2    1.2e-28   99.8   0.2    1.4  1  ApbA_C           Ketopantoate reductase PanE/ApbA C terminal
  ------ inclusion threshold ------
      0.025   14.8   0.0      0.048   13.9   0.0    1.5  1  Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding doma
      0.097   12.9   0.0       0.23   11.7   0.0    1.8  1  TrkA_N           TrkA-N domain


Domain annotation for each model (and alignments):
>> ApbA  Ketopantoate reductase PanE/ApbA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.4   0.0   3.9e-37   1.7e-33       1     151 [.       5     168 ..       5     169 .. 0.89

  Alignments for each domain:
  == domain 1  score: 115.4 bits;  conditional E-value: 3.9e-37
                 EEEES-SHHHHHHHHHHHH.HTHC..EEEE-SCH.HHHHHHHHCEEEEETT....CEEEEEECEEECCH....SCCCCS-ESEEEE-SSGGGHHHHHHH CS
        ApbA   1 iailGaGaiGsllaakLak.agad..vtlilrsr.rlealkknGlrltseg....geeilrppealsae....ekselepidlvivtvKayqteealee 87 
                 i+ilGaG+iGslla++La        ++l+lr++ r+e+++ + + +t+e+    g    +p+ ++  e    ++ +   i+++ivt+K+ +te+al++
  EPX71638.1   5 IYILGAGSIGSLLACELASiPSIRrdIVLLLRNQtRAEQFRAKQSLMTIERnfeqG----SPQYQTKLEakypAELNVDTIENLIVTTKTVHTEKALSN 99 
                 89***************987654455*************************55333....4444444434466889*********************** PP

                 HGGGECTCEEEEEESSSSCHHHHHTTTS.....TTSEEEEEEEE-EEEEEETTEEEECS--EEEEEESS CS
        ApbA  88 ikplldpntvvlllqNGlgheeelreal.....pkprvlggvtthgatregpgevhhagkgeikigela 151
                 + p+l++++++l++qNGlg+ e+l+  +     ++p++++g+tthg+++++++++ hag g++ki++++
  EPX71638.1 100 YLPFLNEKSNILFVQNGLGVIEHLKRVIwtnesKTPNLYQGITTHGCFQRQDFHFVHAGLGNLKIAKVP 168
                 ********************************8889*****************************9875 PP

>> ApbA_C  Ketopantoate reductase PanE/ApbA C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.8   0.2   2.7e-32   1.2e-28       4     124 ..     204     335 ..     201     336 .. 0.87

  Alignments for each domain:
  == domain 1  score: 99.8 bits;  conditional E-value: 2.7e-32
      ApbA_C   4 larweKllinaainpltalldckngellespelralvrallkEalavaeaegvelseer...........leeaveavlek....taanrsSMlqDvea 87 
                   ++eKl++na++np ta+ldc n+el + ++++ l+++++ E+++v+ ++  +lse++           le  +     +    + +n+sSM+qD ++
  EPX71638.1 204 VSQCEKLAVNACMNPNTAILDCLNRELSNIEAVKLLFKNIITECVDVFFRCIPNLSENEmarrtldiprlLELVMY----TgfevCGNNSSSMRQDTLY 298
                 6799********************************************9999889999756666664443333333....255559999********** PP

      ApbA_C  88 grktEidyinGavvklAeklgvetPvnellyellkal 124
                 +r tEid inG++vklA+++g ++ vn++++ l+ka+
  EPX71638.1 299 KRDTEIDSINGWIVKLADEVGYPANVNKTITLLVKAR 335
                 **********************************985 PP

>> Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   1.1e-05     0.048       1      44 [.       5      48 ..       5      86 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.1e-05
                     EEEE--SHHHHHHHHHHHCTCCT-GEEEEEESSHHHHHHHHCHH CS
  Sacchrp_dh_NADP  1 vliiGaGsvGqavaellarhfdvdaeitvadrskeklealaaka 44
                     + i+GaGs+G+ +a +la   +++++i++  r+++++e+  ak+
       EPX71638.1  5 IYILGAGSIGSLLACELASIPSIRRDIVLLLRNQTRAEQFRAKQ 48
                     679********************99***********99998775 PP

>> TrkA_N  TrkA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   5.1e-05      0.23       1      45 [.       5      53 ..       5     127 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 5.1e-05
                EEEES-SHHHHHHHHHHHH.TT..EEEEEEESSHHHHHHHHHTT.SEEE CS
      TrkA_N  1 iiiiGlGrvGrslaeeLse.gg..kdvvvidkdeerveelreeg.levv 45
                i i+G+G +G+ la eL +  +  +d+v+  +++ r+e++r++  l+++
  EPX71638.1  5 IYILGAGSIGSLLACELASiPSirRDIVLLLRNQTRAEQFRAKQsLMTI 53
                579****************8889988**************998754444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       425  (0.0237046); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2450.34
//
Query:       EPX71639.1  [L=495]
Description: plasma membrane sodium ion/proton antiporter Sod2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.1e-72  244.9  26.6    1.5e-72  244.5  26.6    1.1  1  Na_H_Exchanger  Sodium/hydrogen exchanger family
  ------ inclusion threshold ------
          2    8.5   4.0       0.84    9.7   0.1    2.5  2  DUF543          Domain of unknown function (DUF543)


Domain annotation for each model (and alignments):
>> Na_H_Exchanger  Sodium/hydrogen exchanger family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  244.5  26.6   1.7e-76   1.5e-72       1     378 [.      38     452 ..      38     454 .. 0.93

  Alignments for each domain:
  == domain 1  score: 244.5 bits;  conditional E-value: 1.7e-76
                     XHHHHHHHHHHHH..H.HHHTTSXHHHHHHHHHHHHTTTTTS..........HHHCHCCHHHHCHHCCHHHHCTCGCCTGCCTHHHHHHHHHHHH CS
  Na_H_Exchanger   1 ivllillallvgl..l.arrlklpeivgliiaGlllGpsglglieps.....eedlevlselglilllFlaGleldlrelrknlksilllallgv 87 
                     iv++i++++++++  +  +rl ++e ++  i+Gl++Gp+  +li+p+     e+++ +++++++ + +F++G+el+ ++++ +++si++++   +
      EPX71639.1  38 IVTGIFITIFCYTssIiRERLLIGEATLGSIVGLIFGPHAANLINPKswgnmEYVTIEICRIVINVRVFASGVELPVAYFQNHFRSIFIMLSMIM 132
                     67889999999999966****************************************************************************** PP

                     HHHHHHHHHHHH.HHTXTTCHHHHHHHHHHHTSSXHHHHHHHC....CCCTSTCCCCCCHHHHHHHHHHHCCCCCHHHHHHTXXXXXTSSSTSXH CS
  Na_H_Exchanger  88 litvvliGlllylllilgiplleallfgailsatdpvvvlailk...eegrvperlgtlllgesvlnDavavvllavllalakeeaggetsllll 179
                     ++ +++++ ++y+ l++++++l +ll++++++ tdpv+ + i+      +r+p++++ ll++es++nD++av++l+++l+l++ + +  ++ +++
      EPX71639.1 133 IFGWLVSAGFAYA-LFPKVTFLGSLLIAGCITSTDPVLSALIVGegpIGRRIPQKIRALLIAESGCNDGMAVPFLYFALKLLTVKPSKDAGRDWV 226
                     ******9999998.79***************************966657899*******************************99********** PP

                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHS....CTHHHHHHHHHHHHHHHHHHHHHTSXXXHHHHHHHHHHHHH.HHHHHTTHHHH.HHHHHHHH CS
  Na_H_Exchanger 180 lliflvvavgglllglvigwllrlitrft....dddrelevllvlllallaallaellgvsgilgaflaGlvls.eyefsnklsek.lesfregl 268
                     lli+l+++ +g+++g+v+g+ll ++++++      d++++  l+++++l+++++++++gv+++l +f+ G++l+ + +f  ++se  + +f+++ 
      EPX71639.1 227 LLIVLYECTLGIFVGCVLGVLLDKLLKWFqklkFIDANSYYSLSFAIPLMCSGIGTIIGVDDLLLSFFTGVMLAwDNAFVDNMSECyVPPFIDQT 321
                     **************************************************************************87777777************* PP

                     HHHHHHHHHHHHSXHHHHHX...XHHHHHHHHHHHHHHHTHHHHHHHHHTTTX..SSXHHHHHHCC.CCSS.BHHHHHHHHHHHHHH......XH CS
  Na_H_Exchanger 269 fnplfFvlvGlsldlkvlnn...hlsvlilvllilvaillgrilavflllrll..glslrealiig.fgglqrgavalalaalgpal......gl 351
                     fn lfF ++G  ++++ +n    +lsv++l+++++++++++ri+av+ +++l+  + ++++al++g fg+++++av++ ++a   ++      + 
      EPX71639.1 322 FNLLFFTYFGSIIPWEKFNWiqmELSVWRLIVFTILIFFFRRIPAVLMCKPLIpdIDTWKDALFVGhFGPIGVCAVYMSFVAKSMLTpneiedS- 415
                     **************776643778******************************988999************************99997655551. PP

                     HHH...........TT.SSTTTCSTSXHHHHHHHHHHHH CS
  Na_H_Exchanger 352 lar...........el.yallivvvlftvlvqGlslkpl 378
                                   e+ ++++++v+l +++v+G+s+++l
      EPX71639.1 416 --VyksteefyilhEVlWPIVCFVILSSIIVHGFSVPIL 452
                     ..055566666666555******************9987 PP

>> DUF543  Domain of unknown function (DUF543)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.1   9.4e-05      0.84      18      51 ..     220     254 ..     213     258 .. 0.84
   2 ?   -4.2   0.7       1.9   1.7e+04      41      53 ..     353     365 ..     351     369 .. 0.48

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 9.4e-05
      DUF543  18 dekwDaclsnllvkvglgllvGvvasvllfr.rRa 51 
                 d+  D +l  +l  ++lg+ vG v++vll +  ++
  EPX71639.1 220 DAGRDWVLLIVLYECTLGIFVGCVLGVLLDKlLKW 254
                 5667899999*******************985555 PP

  == domain 2  score: -4.2 bits;  conditional E-value: 1.9
      DUF543  41 vasvllfrrRaap 53 
                 v+++l+f  R +p
  EPX71639.1 353 VFTILIFFFRRIP 365
                 4555555433333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (495 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       719  (0.0401026); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.32s 00:00:00.94 Elapsed: 00:00:00.53
# Mc/sec: 2799.78
//
Query:       EPX71640.1  [L=660]
Description: glycerol-3-phosphate dehydrogenase Gut2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.7e-50  171.5   0.0    5.2e-50  171.0   0.0    1.2  1  DAO            FAD dependent oxidoreductase
    2.1e-37  127.8   0.0      5e-37  126.6   0.0    1.7  1  DAO_C          C-terminal domain of alpha-glycerophosphate ox
    2.4e-11   43.4   1.4    1.2e-10   41.1   1.4    1.9  1  FAD_binding_2  FAD binding domain
    3.4e-06   26.7   3.8    0.00053   19.5   1.8    2.2  2  FAD_oxidored   FAD dependent oxidoreductase
    0.00057   19.1   0.3     0.0073   15.4   0.2    2.1  2  GIDA           Glucose inhibited division protein A
     0.0015   17.3   0.1     0.0026   16.5   0.1    1.3  1  HI0933_like    HI0933-like protein
     0.0016   17.7   0.1     0.0047   16.2   0.1    1.8  1  FAD_binding_3  FAD binding domain
     0.0023   17.2   0.1      0.005   16.1   0.1    1.4  1  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
  ------ inclusion threshold ------
      0.019   14.2   0.0      0.043   13.1   0.0    1.5  1  Pyr_redox_3    Pyridine nucleotide-disulphide oxidoreductase
      0.019   14.8   1.0      0.078   12.9   1.0    2.0  1  3HCDH_N        3-hydroxyacyl-CoA dehydrogenase, NAD binding d
      0.035   13.4   0.3        0.4    9.9   0.0    2.1  2  Thi4           Thi4 family
      0.035   13.4   0.0      0.083   12.2   0.0    1.5  1  AlaDh_PNT_C    Alanine dehydrogenase/PNT, C-terminal domain
      0.043   12.9   0.1      0.066   12.3   0.1    1.3  1  Lycopene_cycl  Lycopene cyclase protein
       0.12   11.6   0.1       0.19   10.9   0.1    1.3  1  BpuJI_N        Restriction endonuclease BpuJI - N terminal
       0.12   12.6   0.4       0.45   10.8   0.4    2.0  1  NAD_binding_8  NAD(P)-binding Rossmann-like domain


Domain annotation for each model (and alignments):
>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  171.0   0.0   4.4e-53   5.2e-50       1     351 [.      71     452 ..      71     453 .. 0.75

  Alignments for each domain:
  == domain 1  score: 171.0 bits;  conditional E-value: 4.4e-53
                 EEEEECTSHHHHHHHHHHHHTT..EEEEESSSSTTSSGGGSSEEEEESSSSTHHSTH.....HHHHHHHHHHHHHHHHHHHHSSTTSEEEEEEEEEES. CS
         DAO   1 dvviiGGGiiGlstAyeLarrg..VtllekgdiagsgaSgrnsgllhsglrylpeas.....elarlslealeelreleeelgididyrrtGllslaa. 91 
                 dv+iiGGG +G ++A ++a+rg  V+llek d+a+ ++S++++++ h+g+ryl++a      ++++l+ eal+e++ + ++ ++++    + ++++++ 
  EPX71640.1  71 DVLIIGGGATGTGVAVDAATRGlnVCLLEKTDFAA-ETSSKSTKMAHGGVRYLEKAIfklskAQLDLVIEALNERANMLRT-APHLCSVLPIMIPVYEw 167
                 8******************************7777.***************9**876788875558888888888888876.89988888999999752 PP

                 ..SHHHHHHHHHHHHHH.HHTTTTEE.EEEHHHHHHHSTT.ST.TTSEEEEETTEEEEEHHHHHHHHHHHHHHTT-EEEESECEEEE.EEEETCEEEEE CS
         DAO  92 ..deeelealdkllall.leagldae.lldaeevrelepa.lp.gllgalfypdtgqvdpakltaalaraaealGveilegtevtgl.eeedgkvwgve 183
                    +   +++ kl++   ++++l+a+ ++++e + +++p+  + +l+++++y+d g +++a++   la +a ++G+++l++ ev+ l + +++kv g  
  EPX71640.1 168 wkIPYYYAGC-KLYDWFaGSQNLRAStVFSREMTTAIAPMlNDsELKASCVYHD-GSFNDARMNTTLAITAVDHGATVLNYMEVKQLiKSPENKVLGAI 264
                 2211223344.44444365567777549****9*******63368999999999.*******************************6366777777776 PP

                 ..EECT.EEE.E.EEEEEEE--GGGHHHH.HTT..CTT.........TSEEEEEEEEEEEEEECCTHSTGSGCSEEEEEEEETTTTEEEEEETTSEEEE CS
         DAO 184 ..rttp.gen.d.aadavVnaaGawsdll.gll..kel.........dlpispvrgqvlvlkplseklvspaailpvpetdddgrgvyvtprkdgrvlv 265
                   +  + g + + +a+a Vna+G+++d++ +++  +           +++++p  g ++vl p    +  ++ +l +p ++ dgr+++++p+  g+vl+
  EPX71640.1 265 avD-REsGVEyEiKATATVNATGPYADKIlEMDedP-NgkppktpqfPRMVVPSSGVHVVL-PEYYCP--RDTGLLDP-STKDGRVMFFLPWQ-GKVLA 356
                 752.4446663235577**********665888642.24667777655899**********.544423..23566666.8999*********5.***** PP

                 EESSEEETTCSS.TSCSHHHHHHHHHHHHHHS..GG.GCGEEEEEEEEEEE.TTS.......SEEEEEEE..TEEEEEEEEECTTTHHHHHHHHHHHHH CS
         DAO 266 Ggtadeesgddd.pevdeedidellealrklf..Pq.lgdvlrkwaGlrpl.pdg.......lpligetp..gvkglylatGhsghGltlapatGklla 350
                 G+t+ + +   + p+++eedi+++l++l++++  P   +dvl++w+G+rpl +d        +p    t     ++l++ t     Gl +  + Gk+++
  EPX71640.1 357 GTTDNPLKEAVSnPAPSEEDIQDILNELQNYItfPVqRDDVLSAWSGIRPLvRDPstvpkglDPSTSSTQglVRSHLIYTTET---GLVTISG-GKWTT 451
                 ***97433333358******************88774689**********543332344445555555336433355555444...7777777.77776 PP

                 H CS
         DAO 351 e 351
                 +
  EPX71640.1 452 Y 452
                 6 PP

>> DAO_C  C-terminal domain of alpha-glycerophosphate oxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.6   0.0   4.2e-40     5e-37       1     125 [.     476     622 ..     476     623 .. 0.98

  Alignments for each domain:
  == domain 1  score: 126.6 bits;  conditional E-value: 4.2e-40
                 --TTS---TT--.......TT-STTHT--HHHHHHHHHHHGGGHHHHHHHHHHTH.........................HHHHHTTS-HHHHHHHHHH CS
       DAO_C   1 crTkklpLvGaenwsknlaaelaqeygldeevaehLaerYGsraeevlelakedekp......................elaerlspelpyieaevvYa 77 
                 c+Tk+l LvG+e+++kn++a+l+++y+++ + a+hL+++YG+r + +lel+ +++ +                      ++ ++ s+++p++ ae++Y+
  EPX71640.1 476 CQTKHLILVGGEDYTKNYSAKLMHTYHIPLTLAKHLSHNYGTRSPLILELYVKSDINklpvvlagnksftpskdsvtknNELSYASFDEPFTVAELKYS 574
                 9**************************************************9999999********************999****************** PP

                 HHHS---SHHHHHHTTS-HHHH-HHHHHHHHHHHHHHHHHHTT--HHH CS
       DAO_C  78 vrhEmartlvDvlaRRtrlafldadaalealpevaelmaeelgWdear 125
                   +E++rt++D++aRR+rlafl+a++al+a+++v+ +m+eelgWd+++
  EPX71640.1 575 LLYEYTRTPADFIARRSRLAFLNAREALRAVDGVTTIMKEELGWDNST 622
                 *********************************************875 PP

>> FAD_binding_2  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.1   1.4   9.7e-14   1.2e-10       1     207 [.      71     292 ..      71     307 .. 0.75

  Alignments for each domain:
  == domain 1  score: 41.1 bits;  conditional E-value: 9.7e-14
                    SEEEE--SHHHHHHHHHHHHTTT-EEEEESSSGGGS....GGGG--S-EE-TT..SSGGSTC.CHHHHHHHHHHHHT.TT-S.-HHHHHHHHHTHH CS
  FAD_binding_2   1 DviViGsGlAGLaAAleaaeaGlkvavvekeqefgg....atawsqGgidavlspeqkkagikdspelhrtdtlkal.dela.dqplveafveaap 90 
                    Dv++iG+G+ G   A+ aa +Gl+v+++ek++        +t ++ Gg+  +       + i  ++ ++  d++ ++  e+a   + +  +++  p
     EPX71640.1  71 DVLIIGGGATGTGVAVDAATRGLNVCLLEKTDFAAEtsskSTKMAHGGVRYLE------KAI-FKLSKAQLDLVIEAlNERAnMLRTAPHLCSVLP 159
                    9*****************************97543333489999******999......346.667778888777764556556777777999999 PP

                    HHHHHHHHTT----B..............CCTS..SB-EEE-TT-SST........EEEE-.STT-......HHHHHHHHHHHHHHTCTEEEEESE CS
  FAD_binding_2  91 eavdeLeelgvpfsr..............tedg..pvdvrelGglsat........artlhdaadarretlvtghallarlvesarkagvdfqert 162
                     ++   e + +p+                      +v  re+ +  a+        a +++   d      ++  ++  +l+ +a ++g ++++ +
     EPX71640.1 160 IMIPVYEWWKIPYYYagcklydwfagsqnL--RasTVFSREMTTAIAPmlndselkASCVY--HDG----SFNDARMNTTLAITAVDHGATVLNYM 247
                    999999999777777444444454444331..03333333333333337776665444444..443....55************************ PP

                    EEEEEEECTT.EEEEEEEEETTTTCEEEEEESEEEE-----GG... CS
  FAD_binding_2 163 eadeLivedg.rvtGavvenpesgrevrirakavvlatgGfgrall 207
                    e+++Li   + +v Ga++ ++esg e +i+a+a+v atg +   ++
     EPX71640.1 248 EVKQLIKSPEnKVLGAIAVDRESGVEYEIKATATVNATGPYAD-KI 292
                    *******8555****************************9884.44 PP

>> FAD_oxidored  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   1.8   4.4e-07   0.00053       1      33 [.      71     103 ..      71     105 .. 0.97
   2 !    6.9   0.0    0.0028       3.4      57     144 ..     193     286 ..     178     287 .. 0.68

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 4.4e-07
  FAD_oxidored   1 DvvVvGGgpaGvaAAiaAaraGakvlLveergv 33 
                   Dv+++GGg+ G+  A+ Aa +G +v+L+e++++
    EPX71640.1  71 DVLIIGGGATGTGVAVDAATRGLNVCLLEKTDF 103
                   9*****************************987 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0028
  FAD_oxidored  57 tgiareflerlrq.rggarlkkrskwn....tfepevakavleemlaeagvtvllntrlveveke.gkriesvtveske.g.rktirAkvfiDATg 144
                   t + re++ +++   ++++lk+    +    +f+   ++++l     ++g tvl   ++++ +k+ ++++ + ++ ++e g +++i+A  ++ ATg
    EPX71640.1 193 TVFSREMTTAIAPmLNDSELKASC--VyhdgSFNDARMNTTLAITAVDHGATVLNYMEVKQLIKSpENKVLGAIAVDREsGvEYEIKATATVNATG 286
                   555666666665543333222222..12344566666666666666777***************855676666666777799*************8 PP

>> GIDA  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.2   6.1e-06    0.0073       1      42 [.      71     111 ..      71     146 .. 0.82
   2 ?    1.4   0.0      0.11   1.4e+02     118     156 ..     249     293 ..     239     307 .. 0.62

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 6.1e-06
                 CEEEE-SSHHHHHHHHHHHHTT--EEEEES-GGGTT--SSSS CS
        GIDA   1 dviViGgGhAGceAAlaaarlGakvlLithkldtiaelsCnp 42 
                 dv +iGgG  G+  A+ aa +G++v L+ +k+d  ae s   
  EPX71640.1  71 DVLIIGGGATGTGVAVDAATRGLNVCLL-EKTDFAAETSSKS 111
                 799*************************.7888777776544 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.11
                 EEEEEECT.TEEEE...EEETTS-..EEEECEEEE--TT-BT-EE CS
        GIDA 118 veelivee.kkvkg...vvtedge..tikakavviatGtflkgki 156
                 v++li +  +kv g   v  e+g   +ika a+v atG++ +   
  EPX71640.1 249 VKQLIKSPeNKVLGaiaVDRESGVeyEIKATATVNATGPYADKIL 293
                 5555443346666632133334441145666********877654 PP

>> HI0933_like  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.1   2.2e-06    0.0026       1      33 [.      70     102 ..      70     112 .. 0.93

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 2.2e-06
                  -SEEEE--SHHHHHHHHHHHHTT--EEEE-SSS CS
  HI0933_like   1 kdviviGgGaAGlmaAisaakrgkrVlllekak 33 
                  +dv++iGgGa G   A+ aa+rg +V llek++
   EPX71640.1  70 YDVLIIGGGATGTGVAVDAATRGLNVCLLEKTD 102
                  59****************************985 PP

>> FAD_binding_3  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.1   3.9e-06    0.0047       2     163 ..      70     286 ..      69     401 .. 0.66

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 3.9e-06
                    EEEEEE--SHHHHHHHHHHHHTTHHEEEEESSSSSCCSS.S--EEEHHHHHHHHHTT-HHHHHHHSEECCCCEEEEEEE................. CS
  FAD_binding_3   2 tdVlIVGaGpaGlmlallLseaGvrvvlvekrsttvvlp.radglnqrtmellrqlGledrilaegapnelmgealyne................. 79 
                    +dVlI+G+G +G   a   +++G +v+l+ek + +++++ ++  +    ++ l+++  + + ++ + + e  +e  +                   
     EPX71640.1  70 YDVLIIGGGATGTGVAVDAATRGLNVCLLEKTDFAAETSsKSTKMAHGGVRYLEKAIFKLSKAQLDLVIEALNERANMLrtaphlcsvlpimipvy 165
                    79******************************9999988899999999999888876655544444433333332222246667777777777777 PP

                    .............................CCCC.....CEEEEEHHCHHCST-CEE-.....-HHHHHHHHHHHHHHHTEEETCSEEEECCEECCC CS
  FAD_binding_3  80 .............................lsdt.....pkaradlelesspervtvy.....pqteleriLvehaeerglqvrfktevesleqdee 136
                                                 +s+            l  +s+ ++ +vy     +  +++  L+  a+ +g++v    ev+ l +  e
     EPX71640.1 166 ewwkipyyyagcklydwfagsqnlrastvFSREmttaiA---PML-NDSELKASCVYhdgsfNDARMNTTLAITAVDHGATVLNYMEVKQLIKSPE 257
                    777777777777766666666665544442222322111...111.23444444443111114556666777777777777777777666655443 PP

                    C.C.CCEEEECCTTEEEEEEEEEEEE--G CS
  FAD_binding_3 137 g.v.taevrdketgeeetvrakYlvGaDG 163
                    + v  a + d+e+g e++++a  +v a G
     EPX71640.1 258 NkVlGAIAVDRESGVEYEIKATATVNATG 286
                    31214555577777777777766666666 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.1   4.2e-06     0.005       1      48 [.      70     116 ..      70     150 .. 0.82

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 4.2e-06
                  CSEEEE--SHHHHHHHHHHHHHTS-EEEEETTHCHHHCSHHHHCHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2   1 kdvvviGgGpAGlaaaltlaqagakvtlvelegtclnggcllskallg 48 
                  +dv++iGgG+ G+ +a ++a+ g++v l+ +++ +  ++ + s+++++
   EPX71640.1  70 YDVLIIGGGATGTGVAVDAATRGLNVCLL-EKTDFAAETSSKSTKMAH 116
                  699**************************.777777777766666655 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   3.6e-05     0.043       1      32 [.      73     103 ..      62     115 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 3.6e-05
  Pyr_redox_3   1 iIiGaGPaGlaaaielkkagledylilEkgni 32 
                  +IiG+G+ G ++a+ +   gl +++ lEk   
   EPX71640.1  73 LIIGGGATGTGVAVDAATRGL-NVCLLEKTDF 103
                  69******************9.7999*99865 PP

>> 3HCDH_N  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   1.0   6.5e-05     0.078       2      43 ..      72     113 ..      71     151 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 6.5e-05
                 EEEE--SCCHHHHHHHHHHTT-EEEEE-S-HHHHHHHHHHHH CS
     3HCDH_N   2 vaviGaGtmGagiaavfasagleVvlvdiseealekalekie 43 
                 v +iG G  G+g+a  +a +gl+V l++ ++ a+e++ ++ +
  EPX71640.1  72 VLIIGGGATGTGVAVDAATRGLNVCLLEKTDFAAETSSKSTK 113
                 779************************998877777666554 PP

>> Thi4  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0   0.00033       0.4      16      49 ..      68     100 ..      57     107 .. 0.88
   2 ?    1.1   0.1      0.16   1.9e+02      98     197 ..     227     268 ..     198     285 .. 0.62

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00033
                 TEEEEEEE--SHHHHHHHHHHHHCTTS-EEEEES CS
        Thi4  16 aesDvvivGaGssGLtaayylakkpdlkvailer 49 
                  + Dv+i+G+G++G   a   a++ +l+v++le+
  EPX71640.1  68 PKYDVLIIGGGATGTGVAVDAATR-GLNVCLLEK 100
                 567*********************.*******97 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.16
                 HHHHHHHHHHHTSTTEEEEESEEEEEEEEETBTEEEEEEEEEHHHHTCTTTSS.-B-EEEEEEEEEE--GSSSTTTTHHHHHHHHCTTTS-----ECB- CS
        Thi4  98 lftstllskvlqlanvkllnavaveDlivregegvaGvvinwtlvelahdtqscvDPlvirakvvvdatGhdgeivavvvkkikleakiekvkgeksld 196
                  + +tl+  +++  ++ +ln + v  li  ++++v G                                                           ++d
  EPX71640.1 227 RMNTTLAITAVD-HGATVLNYMEVKQLIKSPENKVLG---------------------------------------------------------AIAVD 267
                 344455555555.555555555555555555555544.........................................................44444 PP

                 H CS
        Thi4 197 a 197
                  
  EPX71640.1 268 R 268
                 4 PP

>> AlaDh_PNT_C  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0     7e-05     0.083      18      99 ..      59     141 ..      52     156 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 7e-05
                  ETTCEETCB---EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHH.TTTCECEEHCHHHHHHHHHHHH-SEEEE-- CS
  AlaDh_PNT_C  18 tlaGgvpgvepakvlviGgGvaGlqAiatakglgakVtvlDvrparleqles.lgakfvevlksqeellaeavkeadvvigtv 99 
                   l+ +++ + +  vl+iGgG  G+  +  a+  g +V +l++   ++e  ++  +     v++ +++ ++ + ++ d+vi + 
   EPX71640.1  59 SLLNRIKSTPKYDVLIIGGGATGTGVAVDAATRGLNVCLLEKTDFAAETSSKsTKMAHGGVRYLEKAIFKLSKAQLDLVIEAL 141
                  5677888888999**************************99877666655554665656788888999999999999999775 PP

>> Lycopene_cycl  Lycopene cyclase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   5.5e-05     0.066       1      34 [.      71     102 ..      71     126 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 5.5e-05
  Lycopene_cycl   1 DvvviGaGpAglslAarlteakpglkvvlieasp 34 
                    Dv++iG+G+ g  +A     a  gl+v+l+e  +
     EPX71640.1  71 DVLIIGGGATGTGVAVDA--ATRGLNVCLLEKTD 102
                    9****************9..**********9776 PP

>> BpuJI_N  Restriction endonuclease BpuJI - N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   0.00016      0.19     152     217 ..     228     294 ..     223     297 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00016
     BpuJI_N 152 lskelslskeeitycilndlrvlrgkaspk.evaelilknrkneieyeagkiktkGdvsrYagdild 217
                 +   l +++ + +  +ln ++v + ++sp+ +v+ +i  +r+ ++eye + + t      Ya+ il+
  EPX71640.1 228 MNTTLAITAVDHGATVLNYMEVKQLIKSPEnKVLGAIAVDRESGVEYEIKATATVNATGPYADKILE 294
                 56778999********************97479***************7776666666677777765 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.4   0.00037      0.45       1      29 [.      74     102 ..      74     122 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00037
                    EE--SHHHHHHHHHHHCCTEEEEEE-SSS CS
  NAD_binding_8   1 IvGaGlsGlvaAylLakagfdvlllekrd 29 
                    I+G+G++G   A  +a +g++v llek d
     EPX71640.1  74 IIGGGATGTGVAVDAATRGLNVCLLEKTD 102
                    9*************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (660 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       588  (0.032796); expected 358.6 (0.02)
Passed bias filter:                      561  (0.0312901); expected 358.6 (0.02)
Passed Vit filter:                        71  (0.00396006); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.80u 0.32s 00:00:01.12 Elapsed: 00:00:00.52
# Mc/sec: 3841.04
//
Query:       EPX71641.1  [L=430]
Description: alpha-galactosidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.1e-63  212.4   7.1    7.2e-62  209.1   7.1    2.2  1  Melibiase_2  Alpha galactosidase A
    3.8e-14   52.5   0.9    1.6e-13   50.5   0.8    2.0  2  Melibiase_C  Alpha galactosidase C-terminal beta sandwich dom
    2.8e-09   36.4   0.1    7.2e-09   35.1   0.0    1.6  2  Melibiase    Melibiase


Domain annotation for each model (and alignments):
>> Melibiase_2  Alpha galactosidase A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  209.1   7.1   1.2e-65   7.2e-62       1     284 []      26     317 ..      26     317 .. 0.81

  Alignments for each domain:
  == domain 1  score: 209.1 bits;  conditional E-value: 1.2e-65
                  S--EEEESHHHHTT---TTTSTTTSSSHHHHHHHHHHHHHTTHHHHT--EEE--SS-B-SS--.TTS---B-TTTSTTHHHHHHHHHHHTT-EEEEEE CS
  Melibiase_2   1 tppmgwlawerfrcnvdceedpenciseklfmeladvlaedgykdlgyeyviiddcwlakerd.kegrlqadpkrfpsgikkladyvhskglklgiya 97 
                  tppmgw++w+ ++c++          +e+++ + a+ + e g  +lgy+y+++ddcw+ +erd + g++ +dp++fp+gi+ + + +h+ g+k+g+y+
   EPX71641.1  26 TPPMGWNSWNHYTCDI----------NETVILSNAKAMEEAGLLELGYNYIVMDDCWSKRERDpETGEIVPDPEKFPHGIESMIEEIHNMGFKFGMYS 113
                  8*************96..........68999999*****************************4469******************************* PP

                  ESSSB-TTSSB--TTTHHHHHHHHHHHT--EEEEE-TSSSHHH.....HHHHHHHHHHHHHHTTS--EEE.E-HHHHH.TTTS..---HHHHHHH-SE CS
  Melibiase_2  98 dlgtktcagypgslkyleidaktfadwgvdllkldgcysnlee.....laegykelslalnktgrsivys.cewplyavvkkk..kvdyteiaktcnl 187
                    g+ tcagypgsl++ eidak fadw +d+lk+d c+++ ++       + y+++s alnktgr+i+y+ c+w   +v++     ++  +i+     
   EPX71641.1 114 SAGKYTCAGYPGSLDHEEIDAKKFADWKIDYLKYDNCFNQGRSgtpliSYKRYEAMSEALNKTGRPIFYAlCQWGEDQVWNWAstVANSWRITGDIYD 211
                  **************************************765542222245789****************87***988766543003343344333333 PP

                  EE-SS---...SSHH..HHH....HHHHHHHHTHHHHTTT-BT.TBEEE---B-TTSSSS-HHHHHHHHHHHHHTT--EEE-S-TTS--HHHHHHHT- CS
  Melibiase_2 188 wrnyddiq...dswd..svk....eivdyfaenqdvlvevagp.gkwndpdmliignfglsldqqraqmalwailaapllmsndlrkispeakallln 275
                    n +di+   +++d  s++    +i++ + ++   lv+ +gp  +w d dml ign g+++d+  + +++wa+l +p+++ nd+ +++p++ +l+ n
   EPX71641.1 212 SFNRYDIRcpcETYDcpSLQgyhcSIMNIV-NKAAPLVQKTGPnSGWSDMDMLEIGNGGMTYDEYITHFTMWAVLKSPIFLGNDVSNMTPDHLELVSN 308
                  334445531111222112221111344433.445567777788358**************************************************** PP

                  HHHHHHHT- CS
  Melibiase_2 276 keviainqd 284
                   +via+ qd
   EPX71641.1 309 PDVIAVHQD 317
                  ********8 PP

>> Melibiase_C  Alpha galactosidase C-terminal beta sandwich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.46   2.7e+03      42      51 ..      67      76 ..      40      88 .. 0.70
   2 !   50.5   0.8   2.6e-17   1.6e-13       2      71 .]     333     412 ..     332     412 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.46
                 EEEETTTTEE CS
  Melibiase_C 42 svrDlWtgkd 51
                  + D W++++
   EPX71641.1 67 VMDDCWSKRE 76
                 5779999998 PP

  == domain 2  score: 50.5 bits;  conditional E-value: 2.6e-17
                  TTEEEEEEE-SSS-EEEEEEE.-E......EEEE-GTT--S-......EEEEETTTTEEE-TT-.-EEEE-TT-EEEEEE CS
  Melibiase_C   2 gdlqvWakpLsdGdvaValfN.rt....tvtvdwsdlglpgs....ssysvrDlWtgkdlgtgs.ssaevpphgvvllrl 71 
                  g ++++++ Ls+Gd++Va++N ++    ++++ +sd+ ++++      ++++DlWt++++++    +a+v+phg++++rl
   EPX71641.1 333 GYVHLFSGSLSNGDWVVAVINeANvplvEMSILFSDIFIDNRdntkFVWNIKDLWTKETTTAARhLTADVAPHGTQVWRL 412
                  678999***************622566789****99***999999989***********66444269***********97 PP

>> Melibiase  Melibiase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.1   0.0   1.2e-12   7.2e-09      41     123 ..      27     112 ..      18     117 .. 0.82
   2 ?   -2.8   0.0       0.4   2.4e+03     180     191 ..     138     149 ..     129     157 .. 0.67

  Alignments for each domain:
  == domain 1  score: 35.1 bits;  conditional E-value: 1.2e-12
   Melibiase  41 rPvllnsWeavyfdfnedklkeladeaa.....klGielfvlDDGWfgkrnddnssLGDWfvneeklpdgleelakevhekglkfGlW 123
                  P+  nsW+  + d ne+ + + a++ +     +lG + +v+DD W  kr+ d  + G+ + ++ek+p+g+e++++e+h+ g+kfG++
  EPX71641.1  27 PPMGWNSWNHYTCDINETVILSNAKAMEeagllELGYNYIVMDDCWS-KRERD-PETGEIVPDPEKFPHGIESMIEEIHNMGFKFGMY 112
                 57778**************998877665112235677899******5.45444.4569****************************97 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.4
   Melibiase 180 keaqidyvkWDm 191
                 ++ +idy+k+D+
  EPX71641.1 138 ADWKIDYLKYDN 149
                 445677777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (430 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       365  (0.0203581); expected 358.6 (0.02)
Passed bias filter:                      283  (0.0157845); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.45
# Mc/sec: 2895.90
//
Query:       EPX71642.1  [L=238]
Description: glutathione S-transferase Gst2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.1e-19   67.9   0.0    1.5e-18   66.9   0.0    1.6  1  GST_N     Glutathione S-transferase, N-terminal domain
      4e-14   52.8   0.0    6.8e-14   52.0   0.0    1.3  1  GST_N_3   Glutathione S-transferase, N-terminal domain
    3.3e-13   49.7   0.0    6.7e-13   48.7   0.0    1.6  1  GST_N_2   Glutathione S-transferase, N-terminal domain
    1.2e-10   41.4   0.0      3e-10   40.2   0.0    1.6  1  GST_C_3   Glutathione S-transferase, C-terminal domain
    1.6e-10   41.1   0.1    4.5e-10   39.6   0.1    1.8  1  GST_C     Glutathione S-transferase, C-terminal domain
    0.00019   21.4   0.0    0.00075   19.5   0.0    2.0  1  GST_C_2   Glutathione S-transferase, C-terminal domain


Domain annotation for each model (and alignments):
>> GST_N  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.9   0.0   4.9e-22   1.5e-18       2      75 ..      12      88 ..      11      89 .. 0.96

  Alignments for each domain:
  == domain 1  score: 66.9 bits;  conditional E-value: 4.9e-22
                EEEEESSSTSHTHHHHHHHHHHTT-EEEEEEECSTTTCGGCHHHHHHCTTS-SSEEEET...TEEEESHHHHHHHHH CS
       GST_N  2 vltlysirgsprahrirlllaakgveyevvpldfeageekspellklnplgkvPaLedn...gkkltESraIleYia 75
                ++tl+s+ gsp+++++ l+l++++++y  v++df+++e+ks e+l  np+g+vP+L+d+   +  ++ES aIl Y+ 
  EPX71642.1 12 QFTLFSHKGSPNPWKVALALKELNLSYDSVFYDFGKNEQKSVEHLAYNPNGRVPTLVDHknkEIAIWESDAILAYLT 88
                79*********************************************************998889**********95 PP

>> GST_N_3  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.0   0.0   2.3e-17   6.8e-14       1      73 [.      15      93 ..      15      96 .. 0.84

  Alignments for each domain:
  == domain 1  score: 52.0 bits;  conditional E-value: 2.3e-17
                EES-TTSHHHHHHHHHHHHHT--EEEE---..TTTT.HHHHHHH-TT--SSEEETT.S-..EEESHHHHHHHHHHHH-G CS
     GST_N_3  1 LygfpaSpyarrvrlaLnekglpvevvevt..pgeh.deellaknplgkvPvLedd.ge..altdSlaIidyLeelypg 73
                L++ ++Sp+ ++v+laL+e++l++  v  +  + e  + e la+np+g+vP+L+d  ++  a+++S+aI+ yL ++y+ 
  EPX71642.1 15 LFSHKGSPNPWKVALALKELNLSYDSVFYDfgKNEQkSVEHLAYNPNGRVPTLVDHkNKeiAIWESDAILAYLTDKYDT 93
                78899*******************96555522444348888************98754468****************96 PP

>> GST_N_2  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.7   0.0   2.2e-16   6.7e-13       2      69 ..      21      89 ..      20      90 .. 0.93

  Alignments for each domain:
  == domain 1  score: 48.7 bits;  conditional E-value: 2.2e-16
                -HHHHHHHHHHHHCT--EEEEEEH...-TTSHHHHHHHHCTTTSSSEEE-CTTE..EEESHHHHHHHHHH CS
     GST_N_2  2 CPwahRvlialalkglediisvvvlepkgfekseefprlnprgtVPvLwdkdgq..vineSseIlrylet 69
                +P +++v +al++++l +   ++ +  k ++ks e +++np+g VP+L+d++++   i+eS +Il yl +
  EPX71642.1 21 SPNPWKVALALKELNLSYDSVFY-DFGKNEQKSVEHLAYNPNGRVPTLVDHKNKeiAIWESDAILAYLTD 89
                8******************8777.778999********************988889***********965 PP

>> GST_C_3  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.2   0.0   9.9e-14     3e-10      23      98 ..     143     231 ..     123     232 .. 0.86

  Alignments for each domain:
  == domain 1  score: 40.2 bits;  conditional E-value: 9.9e-14
                 HHHHHHHHCHHHHHHHHHHCHGTSSSSTTS--HHHHHHHHHHHHHHHH.............TCC..CC-HHHHHHHHHHHTSHHHHHHHCT CS
     GST_C_3  23 efleerlpkflkyfekvlkkkgggylvgdklTyADlalfqvldgleea.............eal..kkfpklkalyervearpkikaYles 98 
                 + ++++ +++l+++e++l+   ++ylv +k+T+ADl+++++ + l  +             +++  k+fpk  a+++r+ +rp+++a l +
  EPX71642.1 143 TRYRNETKRVLGVLETILQ--DKEYLVANKCTIADLSFVTWNSLLPAVfgpgrhkfkedlpQIDfeKEFPKTYAWHQRLIQRPAVAAALDE 231
                 55668889***********..899*****************9999999******9999887333569*******************99876 PP

>> GST_C  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.6   0.1   1.5e-13   4.5e-10      24      93 .]     142     223 ..     103     223 .. 0.81

  Alignments for each domain:
  == domain 1  score: 39.6 bits;  conditional E-value: 1.5e-13
                 HHHHHHHHHHHHHHHHHHHHTSSSSSTTSSCHHHHHHHHHHHHHHHH.TTTTT............TTTSHHHHHHHHHHHTSH CS
       GST_C  24 vdealekvaevlsaleeelkkqdylvGdkltlADialvpilnwlqrl.glafg............qekfpnlkawlerimarp 93 
                     ++++++vl +le+ l ++ ylv +k t+AD+ +v+++  l+ + g++              +++fp+ +aw++r+++rp
  EPX71642.1 142 ITRYRNETKRVLGVLETILQDKEYLVANKCTIADLSFVTWNSLLPAVfGPG-RhkfkedlpqidfEKEFPKTYAWHQRLIQRP 223
                 55667899*********************************9554431222.135567788*********************9 PP

>> GST_C_2  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   2.5e-07   0.00075       3      69 .]     141     218 ..     140     218 .. 0.87

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 2.5e-07
                 HHCHHHHHCCHCHHHCTTT---SS.CTTCS--HHHHHHHHHHHHHHHH.HHS-..........---TT-HHHHHHHHH CS
     GST_C_2   3 averaleqldaaldaleahLadspflfGdqptlaDialapflvrlraa.gpgf..........direaypnlraWler 69 
                 a++r +++ ++ l +le++L d+ +l  ++ t+aD ++ ++   l a+ gpg           d+++++p+  aW++r
  EPX71642.1 141 AITRYRNETKRVLGVLETILQDKEYLVANKCTIADLSFVTWNSLLPAVfGPGRhkfkedlpqiDFEKEFPKTYAWHQR 218
                 6889999****************************9999988888555444445689999999999**********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       430  (0.0239835); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1694.33
//
Query:       EPX71643.1  [L=130]
Description: hypothetical protein SOCG_01858 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       983  (0.0548274); expected 358.6 (0.02)
Passed bias filter:                      660  (0.0368119); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 922.74
//
Query:       EPX71644.1  [L=579]
Description: cationic amino acid transporter Cat1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   6.6e-136  453.7  28.6   7.6e-136  453.5  28.6    1.0  1  AA_permease    Amino acid permease
    1.6e-32  112.9  34.5      2e-32  112.5  34.5    1.1  1  AA_permease_2  Amino acid permease


Domain annotation for each model (and alignments):
>> AA_permease  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  453.5  28.6  8.5e-140  7.6e-136       1     475 [.      79     539 ..      79     543 .. 0.96

  Alignments for each domain:
  == domain 1  score: 453.5 bits;  conditional E-value: 8.5e-140
  AA_permease   1 hvlvialggviGtglfvglgvvlsqaGplgallayllagvviflvmlslgeiatngpksggfytyasrflgpelGfviGlnylfswitvlaleltaas 98 
                  h+++i++gg+iG gl+vg+g+ l+ +Gp+++++ y l+g+++fl++++lge+a+++p +ggf+tya+rf++p++Gf+ ++ny+++++++++lelt+++
   EPX71644.1  79 HMQMISIGGAIGSGLYVGSGNSLADGGPASLIINYSLIGIMMFLTIYALGEMAVAYPIAGGFNTYATRFIDPAWGFSLSWNYFINYFVTFPLELTTCA 176
                  99************************************************************************************************ PP

  AA_permease  99 iliqfwelvtdlpkawvtgavflvvlliinlvgvkvygeaefilalikiiaiiafiivgiillaggkpnkgagfrflgdngsifknnlppgfakeeeg 196
                  i++ fw   td++   ++++vflv++++inl+gv++yge+ef+l++ik+ia ++fii+ ii+ +gg p+++   r +   + i  n + +g       
   EPX71644.1 177 ITFRFW---TDIN-SGAWITVFLVAVILINLLGVRAYGEVEFVLSFIKVIATLGFIILAIIIDCGGVPTDH---RGYIGGSIIKRNAFRHG------- 260
                  ******...99*9.9********************************************************...77777777788889999....... PP

  AA_permease 197 afknfisvfvivvfaftGielvaiiagEvkdPeksiPkailqvviritifYvlsllligllvprndlgllndsasa.aspfvifikesgvsvlaplin 293
                   fk+f+svfv+++f+f+G+e ++++a+E++dP++++Pk+++q+++ri++fYv+sll+igll++ +d++l+     +  spfv++i+e+++++l++++n
   EPX71644.1 261 -FKGFCSVFVTAAFSFSGTEVIGLAAAEADDPKRTLPKSVRQIFWRIALFYVCSLLMIGLLIDPDDPQLMGNESGTsTSPFVLAIQEAKIKGLPSVFN 357
                  .********************************************************************974332258******************** PP

  AA_permease 294 aviltaalssansslysasRvlyslakdglaPkvlkkvskrgvPlraillsmiisllalllaslnla...apivfnfllaisaliglivwlliilsyl 388
                  avi+++++s+ n s+y+a R+l+ +a  ++aP+++ + ++ g+Pl a+ ++++++++a+++++   +    ++vfn+lla+++l+++++w +i+ls++
   EPX71644.1 358 AVIIVSVISVTNTSTYTAGRTLQGMATLKHAPRIFLYTDRLGRPLIAMGVVLAFGFFAYINEANENGkdiSDTVFNWLLALTGLSNFFCWASICLSHI 455
                  ***********************************************************55444333222579************************* PP

  AA_permease 389 rfRkalkyqgrsieelgfkaallplgvilvlaaliiillilalyayltvkkgpkdwgaasfaaaylivllfliilvgvklhvknkrp 475
                   fR a+k+qg+s++el f ++l+++g+++++ ++++ l++++++ +++v++ p   +a +f++ yl +++ l+++vg+k++ ++ +p
   EPX71644.1 456 MFRLAFKKQGHSLDELAFVSPLGVWGSCIGFGFNVLCLIAQFYVSLFPVGGKP---NANDFFQGYLAAVVALVFFVGYKIYDRRTIP 539
                  ************************************************99999...9************************999987 PP

>> AA_permease_2  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.5  34.5   2.3e-36     2e-32       8     416 ..      82     514 ..      78     527 .. 0.82

  Alignments for each domain:
  == domain 1  score: 112.5 bits;  conditional E-value: 2.3e-36
  AA_permease_2   8 alvigsvigsgifvkn..laasggpa..lilwvwiavligslavllvyaElssalprsgGiyvytkaafgkkvaflsawfnwfayvpvlasilsva 99 
                    +++ig +igsg +v +  ++a ggpa  +i + +i++++  +  ++++ E++ a p  gG  +y+ +++ + ++f  +w +++ y++++++ l+ +
     EPX71644.1  82 MISIGGAIGSGLYVGSgnSLADGGPAslIINYSLIGIMM--FLTIYALGEMAVAYPIAGGFNTYATRFIDPAWGFSLSWNYFINYFVTFPLELTTC 175
                    689***********99988888***95444455555555..579999****988****************************************** PP

  AA_permease_2 100 asyllnalgpdlqgntwltyliaiaililvalinirgikesakiqnilgilkillpliiliilglitvdgggfssl......stetdtffpngwpg 189
                    a ++ ++++ +     w+t     ++l+ v+lin++g++ ++ + ++l  +k++ +l  +iil++i+ +gg  +++      s ++ + f +g +g
     EPX71644.1 176 AITFRFWTDIN--SGAWIT-----VFLVAVILINLLGVRAYGEVEFVLSFIKVIATLG-FIILAIIIDCGGVPTDHrgyiggSIIKRNAFRHGFKG 263
                    ****9987644..334444.....569999***********************76665.55588888899999988999999999999******** PP

  AA_permease_2 190 vllgllivlwsfdGfesaanvsee..vkkkdvpkaifigllivlvlyllvniaflgvvpddei....anlsnlgsvaalffeavggkvvaiivvil 279
                    + +++ ++++sf+G e++   + e  ++k+++pk    ++  ++++y+   + +   + +d      ++++++ s++ l  + +  k + ++++++
     EPX71644.1 264 FCSVFVTAAFSFSGTEVIGLAAAEadDPKRTLPKSVRQIFWRIALFYVCSLLMIGLLIDPDDPqlmgNESGTSTSPFVLAIQEAKIKGLPSVFNAV 359
                    ************************878889******999999999999888888888888877556655556777899999999999********* PP

  AA_permease_2 280 ialsllgaintavigssrvlealardgvlPrffakvnkfgspiraiiltaivslillllfl.........lassaaynfllsvsslgliisyllli 366
                    i++s++   nt ++++ r+l+ +a+ +  Pr f  +++ g+p+ a+ +++ + ++ +   +         ++ ++ +n+ll+++ l+++++++ + 
     EPX71644.1 360 IIVSVISVTNTSTYTAGRTLQGMATLKHAPRIFLYTDRLGRPLIAMGVVLAFGFFAY---IneanengkdIS-DTVFNWLLALTGLSNFFCWASIC 451
                    ****************************************************95443...356688877664.79********************* PP

  AA_permease_2 367 igalilrkkrphlkr..........pgkilvaiig...alfllfllvalffppkgpatqssli 416
                    ++ ++ r   ++++            g +   i +   +l+l+  +++  fp  g  + + ++
     EPX71644.1 452 LSHIMFRLAFKKQGHsldelafvspLGVWGSCIGFgfnVLCLIAQFYVSLFPVGGKPNANDFF 514
                    ****99987777755566677777633343333222235555555666667766666655544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (579 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       620  (0.0345808); expected 358.6 (0.02)
Passed bias filter:                      312  (0.017402); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.31s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 3896.19
//
Query:       EPX71645.1  [L=253]
Description: peptidase family C26 protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.9e-45  155.3   0.0    2.4e-45  155.0   0.0    1.1  1  Peptidase_C26  Peptidase C26
      1e-13   51.5   0.2      2e-13   50.6   0.0    1.5  2  GATase         Glutamine amidotransferase class-I
      0.005   16.0   0.0       0.78    8.8   0.0    2.2  2  GATase_5       CobB/CobQ-like glutamine amidotransferase doma
  ------ inclusion threshold ------
       0.18   11.4   0.3        2.4    7.7   0.3    2.1  1  GATase_3       CobB/CobQ-like glutamine amidotransferase doma


Domain annotation for each model (and alignments):
>> Peptidase_C26  Peptidase C26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  155.0   0.0   5.3e-49   2.4e-45      28     216 .]      18     202 ..       7     202 .. 0.89

  Alignments for each domain:
  == domain 1  score: 155.0 bits;  conditional E-value: 5.3e-49
  Peptidase_C26  28 syveavekagglpvllpieedeedvkaildkldgllltGgqdvePslygeeps.ekeeeadpeRdalelaLiraalergvPilgiCrGlqllnval 122
                     yv+a+ kagg+p+++ +  ++++   i +++dg++l+Gg+ v+Ps+yge+ + ++   +d +Rd le a++  a++ ++PilgiCrG+qllnv +
     EPX71645.1  18 LYVDAIVKAGGTPIIVYPGLPKSK---IPSQVDGVILAGGDSVHPSRYGEDFKrNAPVTMDLDRDDLEWAIVDFAVKLHLPILGICRGCQLLNVYF 110
                    49***************9977765...56789******************9662556789************************************ PP

  Peptidase_C26 123 GGtlyqdieeqsgltdhreheq.saashavkvekgsllaellgseeievnslHhqaikelaeelrveAvaeDgviEaieseeakafvlgvQwHPE 216
                    GG+l+q+++++   + hr +++ ++ +hav  ++g +l+ +lgs+ + vns+H q+i++++ +l+ +  aeD + E ies + +  +lgvQwHPE
     EPX71645.1 111 GGSLHQQVSHEGYSNVHRPQKEkDHLAHAVIARSGHMLS-ILGSKPVFVNSIHDQGIHTVGRGLKPTVFAEDSLCEGIESVDGD--ILGVQWHPE 202
                    *********877777777666459999999888888876.6666**************************************77..********9 PP

>> GATase  Glutamine amidotransferase class-I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0      0.87   3.9e+03      40      51 ..      43      54 ..      20      59 .. 0.71
   2 !   50.6   0.0   4.4e-17     2e-13      62     182 ..      84     212 ..      74     219 .. 0.72

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.87
                HHSTSEEEEEEE CS
      GATase 40 lknpdgilvsgG 51
                 +++dg+++ gG
  EPX71645.1 43 PSQVDGVILAGG 54
                468899999888 PP

  == domain 2  score: 50.6 bits;  conditional E-value: 4.4e-17
                 HHHHHHCTSTS-EEEETHHHHHHHHHTTT............EEE.EEECEEEEEEEEEEEETTT.CGGTTTTSEEEEEEEEEEEEESGCHHHTTEEEEE CS
      GATase  62 eaikearenkiPiLGICLGmQllaiefgr............kvv.kekekehhggtmrlgddet.allyglknevierhrHryevnpkelepaglevta 146
                 +++ +a + ++PiLGIC G Qll   fg+            +v+ ++k +++h +   +   ++   + g+ ++v +   H   +     + +gl+ t 
  EPX71645.1  84 AIVDFAVKLHLPILGICRGCQLLNVYFGGslhqqvshegysNVHrPQK-EKDHLAHAVIARSGHmLSILGS-KPVFVNSIHDQGIHT---VGRGLKPTV 177
                 567789999********************5555555555555544333.4444444444443433444444.566777778888887...99******* PP

                 EEETTEEEEEEEEETTTEEEESSBTTSTTSTTHHHH CS
      GATase 147 kseddeelmeiiekknpfvgvQFHPEststpegpel 182
                   ed+   ++i   +  + gvQ+HPE++++++ +++
  EPX71645.1 178 FAEDS-LCEGIESVDGDILGVQWHPEAILEKQSHAP 212
                 **665.55555555558************9998776 PP

>> GATase_5  CobB/CobQ-like glutamine amidotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.0   0.00017      0.78      76     103 ..      79     106 ..      20     129 .. 0.76
   2 !    5.3   0.0     0.002       8.8     209     235 ..     184     210 ..     180     225 .. 0.90

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00017
    GATase_5  76 eklrealekflnredtlaLGiCnGfqlL 103
                 ++l+ a+ +f  +    +LGiC G+qlL
  EPX71645.1  79 DDLEWAIVDFAVKLHLPILGICRGCQLL 106
                 666677777777777789*********9 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.002
    GATase_5 209 iagitspdGRvlalmpHpervveavqk 235
                  +gi s dG +l++  Hpe++ e+ ++
  EPX71645.1 184 CEGIESVDGDILGVQWHPEAILEKQSH 210
                 58*******************998776 PP

>> GATase_3  CobB/CobQ-like glutamine amidotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.3   0.00052       2.4      27      92 ..      32     110 ..       9     127 .. 0.59

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.00052
    GATase_3  27 vrfvplkdeslgedadlvilpGgkdtiqd...lallre.........sgldeaikeaa.eaggpvlgiCGGlqmLGeei 92 
                 + +  l+++++++++d vil Gg ++  +     ++r+          +l+ ai ++a +   p+lgiC G q+L  ++
  EPX71645.1  32 IVYPGLPKSKIPSQVDGVILAGGDSVHPSrygEDFKRNapvtmdldrDDLEWAIVDFAvKLHLPILGICRGCQLLNVYF 110
                 5666677888888888888888876543311122333211000000033444555544156789999999999986655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (253 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       328  (0.0182944); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1822.68
//
Query:       EPX71646.1  [L=256]
Description: COMT 2 protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.3e-16   58.2   0.1    9.5e-16   57.6   0.1    1.2  1  Methyltransf_3   O-methyltransferase
    3.4e-10   40.9   0.0      6e-10   40.1   0.0    1.4  1  Methyltransf_24  Methyltransferase domain
  ------ inclusion threshold ------
      0.043   13.6   0.0      0.095   12.5   0.0    1.5  1  PhdYeFM_antitox  Antitoxin Phd_YefM, type II toxin-antitoxin 


Domain annotation for each model (and alignments):
>> Methyltransf_3  O-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.6   0.1   1.6e-19   9.5e-16      21     162 ..      41     191 ..      25     211 .. 0.85

  Alignments for each domain:
  == domain 1  score: 57.6 bits;  conditional E-value: 1.6e-19
                     TTST.TGGGS--HHHHHHHHHHHHHHT--EEEEE--TTSHHHHHHHTTS-TT-..EEEEEES-HHHHHHHHHHHHHTT-GGGEEEEES-HHHHHH CS
  Methyltransf_3  21 akktdlsemevsvdegqfLslLvklvnakrvleiGvftGyslLatalalPeDG..kilaididreayeialkfiqkagvaekieliegdalkvLe 113
                      k+t++  m +++++gq +   ++    k ++e+G + Gys++    +l +D   +  +++ ++  +e+a k+i+ ag+ ek+ + +g+a++ L 
      EPX71646.1  41 QKNTETHYMDIGQAKGQIIVDKIREKKPKIMVELGGYLGYSAILFGKELLQDStaHYYSLEANPTFAEMATKLIDLAGISEKVTILVGPATTSLV 135
                     46677888***********999999**************************972246799*******************************9997 PP

                     HHHTSSS.....---EEEEEE-S-GGGHHHHHH..HHHHTEEEEEEEEEE-TTGGG CS
  Methyltransf_3 114 elvkdkk.....lpefDfifvDaDkssyvnyye..klleLvkvGgliaiDntLWeG 162
                      l k+ +        fDf+f+D  k+ yv   +  + l+L+  G +++ Dn+   G
      EPX71646.1 136 SLQKELQkqdsgVRTFDFVFIDHWKDLYVPDLRvmESLNLIAPGTVLVADNIYHPG 191
                     665543311113678*************865431268**************97766 PP

>> Methyltransf_24  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.1   0.0     1e-13     6e-10       1     106 []      72     187 ..      72     187 .. 0.89

  Alignments for each domain:
  == domain 1  score: 40.1 bits;  conditional E-value: 1e-13
  Methyltransf_24   1 vEiGvysGvstlwllralrrngagrlvavdhdpgaeeaaalare....aglddrvrlikadseealasla.........agsiDllfiDgghaa 81 
                      vE+G y G+s++++++ l +  + ++++++ +p   ++a++a +    ag+++ v+++++++   l sl+          +++D++fiD  h +
       EPX71646.1  72 VELGGYLGYSAILFGKELLQDSTAHYYSLEANP---TFAEMATKlidlAGISEKVTILVGPATTSLVSLQkelqkqdsgVRTFDFVFID--HWK 160
                      8********************************...555555555556**************99888888888888899899*******..9** PP

  Methyltransf_24  82 eavledleal..lprlapggvvlfdDi 106
                      + + +dl+++  l+++apg+v++ d+i
       EPX71646.1 161 DLYVPDLRVMesLNLIAPGTVLVADNI 187
                      ******99885578**********986 PP

>> PhdYeFM_antitox  Antitoxin Phd_YefM, type II toxin-antitoxin system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.6e-05     0.095      32      73 ..      27      67 ..      26      69 .. 0.93

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.6e-05
                     TTEEEEEEEEHHHHHHHHH.HHHHHCSHHHHHHHHHHHHHHH CS
  PhdYeFM_antitox 32 rGkpvaVlvsleeyerlqeltekllslplnaerlaesgaeve 73
                     rGkp  Vl ++++y++ +e t+++   +++++ + ++++e +
       EPX71646.1 27 RGKPELVLSAIDDYQKNTE-THYMDIGQAKGQIIVDKIREKK 67
                     8******************.**************99988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       481  (0.026828); expected 358.6 (0.02)
Passed bias filter:                      452  (0.0252106); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 1915.89
//
Query:       EPX71647.1  [L=346]
Description: potassium channel subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.7e-62  209.8   0.0    5.7e-62  209.6   0.0    1.0  1  Aldo_ket_red  Aldo/keto reductase family


Domain annotation for each model (and alignments):
>> Aldo_ket_red  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  209.6   0.0   3.2e-66   5.7e-62       4     293 ..      32     335 ..      30     336 .. 0.94

  Alignments for each domain:
  == domain 1  score: 209.6 bits;  conditional E-value: 3.2e-66
                   EE-SSS-ST.TS-HHHHHHHHHHHHHTT--EEE--TT-TTTHHHHHHHHHHHH-TTTGGG-EEEEEE...--SSSTTSSSS-HHHHHHHHHHHHHHH CS
  Aldo_ket_red   4 lGtwqlgskeeiskeealellrraleaGinffDtAevYgkgqseellGealkksrkkreeviiatKv...dlrdaeiksglskeniresleeslkrL 97 
                   lG+w   + + ++ e+  + l++a + Gin+fDtAevY +g se+++G+a+++ ++kr e+++ tKv   ++ + ++  gls+++i e +  slkrL
    EPX71647.1  32 LGGWLTYGNTGYDLEHTKKCLKQAWDLGINTFDTAEVYSQGNSEIIMGKAIQELGWKRSEYVLITKVffgAGPKLPNTTGLSRKHILEGVYGSLKRL 128
                   677765555799*********************************************************999999********************** PP

                   T-S-EEEEEE-S--TTS-.HHHHHHHHHHHHHTTSEEEEEEES--HHHHHHH....HHTTT--EEEEE-B-BTT.-HHHHTTHHHHHHHTT-EEEEB CS
  Aldo_ket_red  98 gtdyvDllllHrpdpslpsieevldaleelvkeGkiraiGvSnfsveqleka....kkkkkvkivavqveynll.releeegllelckkkgvpliay 189
                   +t+yvD++  Hr dps+p +ee+++a+++l+ +Gk+ ++G+S++sv  +e+a     k + + ++a q +yn + r++ e+ ll++ + +g +  ++
    EPX71647.1 129 DTEYVDVIMAHRYDPSVP-MEEIVRAFTHLIHQGKAFYWGTSEWSVFEIEHAhhiaTKYNLIAPIADQPQYNYVtRDHVEKDLLPVQQIYGYGATVW 224
                   ******************.**********************************99999999*************999999***************** PP

                   STTGGGTTGTTTSS---SSSCCC-------..........TS-HHHHHHHHHHHHHHHHTT--HHHHHHHHHTTSTT-SEEEE--SSHHHHHHHHGG CS
  Aldo_ket_red 190 splggGlltgkyqseedkedkeprkdlkrd..........ertsknldaaeelselakehgvslaqlalryalsqpavgivipgasnieqlednlda 276
                   spl+ G+ltgky++  + ++  +      +           + +k l++++++ ++a   g s++qlal++ l+++ v+++i+gas++eq+ +n++a
    EPX71647.1 225 SPLKFGILTGKYNDGIPEDSRLST-----TyaqyadhlksPEGQKILQQVRQVTQIADRLGASPSQLALAWTLKNQYVSTTILGASKPEQIVENVKA 316
                   *************98886643333.....1245678999999******************************************************* PP

                   GG-..---HHHHHHHHHHH CS
  Aldo_ket_red 277 lel..klseeevaeldell 293
                   l+   kl++e ++e+de+l
    EPX71647.1 317 LDYieKLTPEILKEMDEIL 335
                   *6559***********997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (346 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       443  (0.0247086); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2664.49
//
Query:       EPX71648.1  [L=594]
Description: siderophore-iron transporter Str3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-22   80.1  41.9    1.7e-20   73.3  42.2    2.7  2  MFS_1     Major Facilitator Superfamily
    4.1e-05   22.2  27.3    8.9e-05   21.1  27.3    1.5  1  TRI12     Fungal trichothecene efflux pump (TRI12)
     0.0038   15.7   2.2      0.007   14.8   2.2    1.3  1  MFS_3     Transmembrane secretion effector
  ------ inclusion threshold ------
       0.94    9.3   5.7        3.7    7.4   0.3    3.6  3  DUF2976   Protein of unknown function (DUF2976)
        1.2    9.4   4.4       0.57   10.4   0.2    2.7  2  S1FA      DNA binding protein S1FA


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.3  42.2   4.6e-24   1.7e-20      26     352 ..      81     483 ..      75     484 .. 0.83
   2 ?   -1.2   0.0      0.21   7.5e+02     152     187 ..     542     578 ..     537     589 .. 0.76

  Alignments for each domain:
  == domain 1  score: 73.3 bits;  conditional E-value: 4.6e-24
       MFS_1  26 dlgispseigllltl...yalgaavaslplGrlsdrfGrrrvlllglllfalglllllfa.sslwlllvlrvlqGlgagalfpagaaliadwfpkeerg 120
                 ++g   s ++ll tl    ++ +av  ++lG +sd  +r  ++ + l l+a+g+++ + + s++ + +++ v+ ++g+++l  +  +++ d++p + rg
  EPX71648.1  81 AFG--FSILSLLSTLeiaTSIISAVCKPILGKFSDVTSRPLTYAFVLMLYAIGFTVVA-SsSTISAYVIGSVFIAVGSSGLDFLNSVIVGDLTPLKWRG 176
                 455..4555566666555999**************996666************66666.437777********************************** PP

       MFS_1 121 raigllsagfslGa.ilgpllggllasslgWravfyilaivsllafv..lfllllpeepperkrkspkeee............................ 188
                 +a+g+ls+ + + +   g ++ g+l    +Wr+ + ++ai++ +++v  + +l+++e+  +++ k++ +++                            
  EPX71648.1 177 FANGVLSTPYIFTVwFSGLIVQGILD--HNWRWGYGMFAIIMPVVLVpaILILVYLESSAKKSFKRSSKKKvqtlkvstkstkikniyqailevdafgl 273
                 **************444566666666..57***************999877788888888888888888889*************************** PP

       MFS_1 189 ...............................................kgtgpaplvpawkallkdpvlwillialllfffgfsg.lltllplylqevlg 239
                                                                   +p p  p  ++l+++ ++++++i +++ f+g+ + l++++ +y     +
  EPX71648.1 274 illgfgwsllllpfslvnyakdgwrnpsmiammvvggviliiyalyeLYLAPYPSCP-RRILFNKTFMMAIIIDFFYYFAGYIQsLYQTSYTY--IIKD 369
                 *******************99999999999999988888888888887778888888.********999899999999866666677777775..8888 PP

       MFS_1 240 lsglllaglllallalvgailallagrlsdrlgrrrrl.llallllllaalglallavt.ssavllllvlvliGfglgfvfpsllalasdlappeeagt 336
                 +s +   ++++ ++ +  ++++l+ag + + + r ++l +++l++ ++++ +l+  +v  +++v+l+++ vliG+g++f ++ + + a+ ++p e  +t
  EPX71648.1 370 WS-YRNWSYFSNIMTVSLCFFGLFAGVIQRITHRYKYLqIIGLAIKIVGYGILIRSGVGtTNTVALAFSEVLIGMGGSFSVVGSSVSAQASVPHEDLAT 467
                 99.666666677777777777777777777766655551556666666666666666665555666669999*************************** PP

       MFS_1 337 asglfntagslggalg 352
                 +++  ++  ++gga+g
  EPX71648.1 468 VTSMLSLWTQIGGAIG 483
                 ***************9 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.21
       MFS_1 152 avfyilaivsllafv.lfllllpeepperkrkspkee 187
                 ++fy+ a+   ++f+ l+++++ +++     ++  ee
  EPX71648.1 542 SMFYLYAPSIGISFIpLIAAFFQTNYFLGDQQNAFEE 578
                 6799999999999999888888777777777777666 PP

>> TRI12  Fungal trichothecene efflux pump (TRI12)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1  27.3   2.5e-08   8.9e-05      81     484 ..      88     510 ..      83     573 .. 0.68

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 2.5e-08
       TRI12  81 slfstlwttg...qavsilvmgrltdrfgrr...pfvilthilglvgaivgctatkfntllaamtllgv.aagpagasplfvgelmsnktkflgllivs 172
                 sl+stl        av   ++g+++d   r     fv++ +    +g  v ++++ + + +    ++ v ++g      ++vg+l   k + +   ++s
  EPX71648.1  88 SLLSTLEIATsiiSAVCKPILGKFSDVTSRPltyAFVLMLYA---IGFTVVASSSTISAYVIGSVFIAVgSSGLDFLNSVIVGDLTPLKWRGFANGVLS 183
                 456666544401134555578888886655311133443333...444444444444444433333333134555567889********9999999*** PP

       TRI12 173 ipvvvtsglspylgqrlaiqgswrwifyiy.iitsaiav..llivvwyy...ppsfaqlhgkkvr......kr.......eelakldwigiilvivgvs 252
                  p + t   s  + q + ++ +wrw + ++ ii+  + v  +li+v+       sf++   kkv+      k        + +  +d  g+il+  g s
  EPX71648.1 184 TPYIFTVWFSGLIVQGI-LDHNWRWGYGMFaIIMPVVLVpaILILVYLEssaKKSFKRSSKKKVQtlkvstKStkikniyQAILEVDAFGLILLGFGWS 281
                 *******9999999976.799****998773667776662244444443222346776666665422111211111111123457999*********** PP

       TRI12 253 lfllgvswggkpnspwnsakviglissglgslvvfalyevygkpvrpivppalfkdtrgfvcillissimgamnlslviiypqqvvn.ifgsslknwee 350
                 l+ll  s     ++ w    +i ++  g   l+++alye+y  p        lf+ t  f+  ++i      +   +  +y       i   s +nw  
  EPX71648.1 282 LLLLPFSLVNYAKDGWRNPSMIAMMVVGGVILIIYALYELYLAPYPSCPRRILFNKT--FMMAIIIDFFYY-FAGYIQSLYQTSYTYiIKDWSYRNWSY 377
                 *******************************************98655556677766..555555554433.333444555555544045679****97 PP

       TRI12 351 ta.wmsat.asfgtgagvvvlgslfhlvrhirwqilvgalwltaflgam.ssvnrdnknaaials.vlsgfvvawaqditmllvqfittdedlgvafav 445
                  +  m+ + + fg +agv+    + h   +   qi+  a+ +  +   + s v   n   a+a+s vl g+  +++   + +  q     edl    ++
  EPX71648.1 378 FSnIMTVSlCFFGLFAGVI--QRITHR--YKYLQIIGLAIKIVGYGILIrSGVGTTNT-VALAFSeVLIGMGGSFSVVGSSVSAQASVPHEDLATVTSM 471
                 54167765256899***86..567774..44457877788887775444155555554.5566554788888888888888899999999999999999 PP

       TRI12 446 vaaarpfagsiftaafislysnrypkelashlssalrgt 484
                 ++    + g+i +a    +ys++  k l   + s +  +
  EPX71648.1 472 LSLWTQIGGAIGSAIAAPIYSKKVSKYLREFMPSNVTDA 510
                 999999999999999999999988888887777766544 PP

>> MFS_3  Transmembrane secretion effector
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   2.2     2e-06     0.007      55     160 ..     383     488 ..     379     496 .. 0.94

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 2e-06
       MFS_3  55 tLPifllsilaGalaDnfdrRkvllavqlllalvsvlltvlaalgllspwlllaltlligiGaalndPaWqAsvgelvkrrdvpaAvaLnsvginiaRs 153
                 t+ + ++ ++aG++  +  r k+l ++ l + +v   + + + +g ++ ++l  + +lig+G ++     + s +  v+++d+ +   + s+   i  +
  EPX71648.1 383 TVSLCFFGLFAGVIQRITHRYKYLQIIGLAIKIVGYGILIRSGVGTTNTVALAFSEVLIGMGGSFSVVGSSVSAQASVPHEDLATVTSMLSLWTQIGGA 481
                 5667899******************************************************************************************** PP

       MFS_3 154 vGPAlgG 160
                 +G A++ 
  EPX71648.1 482 IGSAIAA 488
                 ****986 PP

>> DUF2976  Protein of unknown function (DUF2976)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.3     0.001       3.7      29      76 ..      89     136 ..      77     148 .. 0.88
   2 ?   -0.8   0.0      0.39   1.4e+03      61      82 ..     207     228 ..     198     250 .. 0.62
   3 ?    2.2   0.2     0.044   1.6e+02      54      77 ..     290     315 ..     258     324 .. 0.69

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.001
     DUF2976  29 illgLvlaavaflaVakaalkkfneisegkaewgkfgltlvvGvvllv 76 
                 +l  L +a+  + aV+k +l+kf+++ +   +++ + ++ ++G+ +++
  EPX71648.1  89 LLSTLEIATSIISAVCKPILGKFSDVTSRPLTYAFVLMLYAIGFTVVA 136
                 4567889999999*******************************9986 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.39
     DUF2976  61 wgkfgltlvvGvvllvvviwLl 82 
                 wg    ++++ vvl+ +++ L+
  EPX71648.1 207 WGYGMFAIIMPVVLVPAILILV 228
                 4443444444555544444443 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.044
     DUF2976  54 isegkaewgk..fgltlvvGvvllvv 77 
                 ++  k  w++  +++++vvG v+l++
  EPX71648.1 290 VNYAKDGWRNpsMIAMMVVGGVILII 315
                 55567777643366777777665554 PP

>> S1FA  DNA binding protein S1FA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.6      0.82   2.9e+03      35      52 ..     234     246 ..     212     261 .. 0.51
   2 ?   10.4   0.2   0.00016      0.57       8      33 ..     299     323 ..     279     333 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.82
        S1FA  35 aqktlPprkkkPvskkkm 52 
                 a+k++     k  skkk+
  EPX71648.1 234 AKKSF-----KRSSKKKV 246
                 33333.....33344443 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00016
        S1FA   8 nPGlivllvvggllllflvgnyvlyv 33 
                 nP +i ++vvgg++l+   + y ly+
  EPX71648.1 299 NPSMIAMMVVGGVILII-YALYELYL 323
                 9************9985.46777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (594 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1162  (0.0648112); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.66u 0.25s 00:00:00.91 Elapsed: 00:00:00.43
# Mc/sec: 4146.38
//
Query:       EPX71649.1  [L=563]
Description: ferric-chelate reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.6e-25   86.8   0.0    3.3e-24   85.1   0.0    2.0  1  FAD_binding_8    FAD-binding domain
      2e-18   67.0   2.5    4.8e-18   65.8   1.5    2.1  2  NAD_binding_6    Ferric reductase NAD binding domain
      1e-13   51.5  11.9      1e-13   51.5  11.9    2.3  2  Ferric_reduct    Ferric reductase like transmembrane componen
  ------ inclusion threshold ------
        4.2    7.4   5.0        2.3    8.3   0.0    3.0  3  Phage_holin_2_1  Bacteriophage P21 holin S


Domain annotation for each model (and alignments):
>> FAD_binding_8  FAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.1   0.0   7.3e-28   3.3e-24       3     108 ..     261     405 ..     259     406 .. 0.94

  Alignments for each domain:
  == domain 1  score: 85.1 bits;  conditional E-value: 7.3e-28
  FAD_binding_8   3 nvskakvalleedliklkvskpkks...lkykaGqyvyinipslsklfwqsHPFtiasapeddklslvikvksgltkklakkllsssk........ 87 
                    n+ +++  +l+ +li++k +kpk+s   l+++aG+++yinip ls  +wq+HPFt+++ p dd+++l++ v+sg+tk+l+ +l   ++        
     EPX71649.1 261 NRCQFDFFILDVNLIYMKAKKPKHSffsLPWAAGNHIYINIPFLS--YWQVHPFTMLNIPTDDYIELIVVVRSGFTKRLNDYLRYPESttgyegnq 354
                    66678888999*************99999****************..9********************************9998765589****** PP

  FAD_binding_8  88 ..............................kelenkkaklkvlidGPYGap 108
                                                  ++++   ++l+ l+dGPYG+ 
     EPX71649.1 355 arqilpynkvrnysaiteegiqsnidlslpLTMNGCLKSLTALVDGPYGPI 405
                    *****************************99998999999*********85 PP

>> NAD_binding_6  Ferric reductase NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.2   0.0       3.7   1.6e+04      30      45 ..      49      64 ..      40      72 .. 0.61
   2 !   65.8   1.5   1.1e-21   4.8e-18       1     155 [.     412     546 ..     412     547 .. 0.85

  Alignments for each domain:
  == domain 1  score: -4.2 bits;  conditional E-value: 3.7
                   xxxxxxxxxxxxxxxx RF
  NAD_binding_6 30 ealktkkikliwvvre 45
                   ++ ++ +++l+ ++r+
     EPX71649.1 49 QNPNNARVNLYLSIRN 64
                   3445666666666666 PP

  == domain 2  score: 65.8 bits;  conditional E-value: 1.1e-21
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  NAD_binding_6   1 yenvllvagGiGitpfisilkdllkkskkealktkkikliwvvressslewfkdvLneleeeksegnieihiYlTseyeaedasdqlissiegens 96 
                    y+nvll++gG+G++++++i++dl+ + +    k  +ik++w++r+ + le+f ++L+  + ++s  ++ei ++lTs + +   +d  i s      
     EPX71649.1 412 YSNVLLLSGGVGVSYTMPIMRDLIINKS----KAISIKFVWSCRSAKLLELFYKILE-FSLNQSHAKLEIICHLTSISISH--RDLPIIS------ 494
                    79**********************9999....9********************9997.33333335899999999987654..5555665...... PP

                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  NAD_binding_6  97 eslkqgvdavsgtrnvkihfgRPnlkevlkdiaskhknssvgvfvCGppklvkevkklv 155
                     s++ g     + +  +i  gRP+++ ++k++a++ k+++  ++ CG+++l+k+vk++v
     EPX71649.1 495 -SKQVG-----NCK-LQIVKGRPDFNWYIKNFADEVKEQTFCMTACGSNALLKTVKNAV 546
                    .22233.....445.88***************************************987 PP

>> Ferric_reduct  Ferric reductase like transmembrane component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.1      0.31   1.4e+03      85     103 ..      17      35 ..       7      49 .. 0.72
   2 !   51.5  11.9   2.3e-17     1e-13       1     125 []     114     229 ..     114     229 .. 0.95

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.31
  Ferric_reduct  85 lalllliilaitSlkfirr 103
                    ++ + +++++++S++++r+
     EPX71649.1  17 IISIYFLFVLFFSIEYVRV 35 
                    3334455566778899984 PP

  == domain 2  score: 51.5 bits;  conditional E-value: 2.3e-17
  Ferric_reduct   1 lGiaalillplalllalRnnflepltglsldklllfHkwlgvlafllallHvilyllnflrfsaldeerlldsllkkpynllGvlalllliilait 96 
                    lG +a  ++ ++++++l+nn+++ ++  s++k++++H++l+v+a+l+ ++H++++ll+  +        +++ ll++   l+G  +  l+ii++i+
     EPX71649.1 114 LGYLASGMFFISFFFSLKNNPFSLMLFSSHEKMNYLHRQLSVIALLIGMIHGFCFLLWSAK--------NYKPLLTDKITLYGYAIGSLIIIIFIS 201
                    589999*****************99999****************************98875........6899999999***************** PP

  Ferric_reduct  97 SlkfirrrlsyelFyylHhllyvaylllv 125
                     l++ r +++ye+F+++Hhl  + +l+l+
     EPX71649.1 202 NLPYYR-KHYYEFFFATHHLCSAGFLFLI 229
                    ******.**************99999875 PP

>> Phage_holin_2_1  Bacteriophage P21 holin S
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.5      0.39   1.8e+03      42      54 ..      10      22 ..       2      32 .. 0.86
   2 ?    8.3   0.0   0.00051       2.3      24      57 ..      97     131 ..      88     134 .. 0.70
   3 ?   -3.4   0.1       2.3     1e+04      39      57 ..     192     208 ..     191     210 .. 0.59

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.39
  Phage_holin_2_1 42 vigllTyltnlYF 54
                      ig +T++++ YF
       EPX71649.1 10 TIGAITLIISIYF 22
                     6899999999999 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00051
  Phage_holin_2_1  24 ldklspeeWsaigvlgglvi.gllTyltnlYFKrk 57 
                       + +sp++W+ ig+++ l   +   ++++++F +k
       EPX71649.1  97 ANVISPNDWNLIGIAARLGYlASGMFFISFFFSLK 131
                      5679**********998753133345666666655 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 2.3
  Phage_holin_2_1  39 gglvigllTyltnlYFKrk 57 
                      g+l+i  + +++nl + rk
       EPX71649.1 192 GSLII--IIFISNLPYYRK 208
                      55554..557788866555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (563 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       747  (0.0416643); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.25s 00:00:00.85 Elapsed: 00:00:00.46
# Mc/sec: 3702.94
//
Query:       EPX71650.1  [L=486]
Description: membrane transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      7e-49  166.6  33.5      7e-49  166.6  33.5    2.0  2  MFS_1     Major Facilitator Superfamily
      5e-06   25.7  28.7    1.5e-05   24.1  28.7    1.8  1  Sugar_tr  Sugar (and other) transporter
    3.1e-05   23.4   2.3    3.1e-05   23.4   2.3    1.6  2  MFS_4     Uncharacterised MFS-type transporter YbfB


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.6  33.5   1.2e-52     7e-49       3     346 ..      48     428 ..      46     435 .. 0.80
   2 ?    1.3   5.6     0.021   1.3e+02     133     176 ..     430     474 ..     415     480 .. 0.76

  Alignments for each domain:
  == domain 1  score: 166.6 bits;  conditional E-value: 1.2e-52
       MFS_1   3 laaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllll.fasslwlllvlrvlqGlgag 100
                  + fl+ +++++++p++p ++++++++s +++ l +tly+lg ++++l++++ls+ fGrr+++l+g+ +fal   +++ ++ +l ++lv+r+++G +++
  EPX71650.1  48 TMSFLNQYGANVFAPSIP-TISKEFHSSRTVVTLGTTLYSLGVLFGILIFAPLSEQFGRRPIYLTGYSVFALL-QIPIaLSVNLEMFLVFRFFSGCFGS 144
                 5789**************.******************************************************.44442546666************** PP

       MFS_1 101 alfpagaaliadwfpkeergraigllsagfslGailgpllgglla.sslgWravfyilaivsllafvlfllllpeepperkrkspkeee.......... 188
                 +++++ga  +ad+f k++rg+++ ++ +  slG+ ++p+++g+++ s +gWr+ f+il i+s +++++ +lll  +++ ++  +  ++e          
  EPX71650.1 145 VGMSNGAGSLADLFEKKDRGKYMIVYFTLLSLGPGVAPIISGFITqSTIGWRWEFWILLILSGVLLLFSFLLL--KETYPPILNRMKLErtgelgelge 241
                 *****************************************************************88744555..444444444444444588998888 PP

       MFS_1 189 .....kgtgpaplvpawkallkdp...vlw....illialllfffgfsg....lltllplylqevlgls....glllaglllallalvgailallagrl 267
                      k+  +++l++ w  ll+ +   +++    il+++++++++++ +    l +++  +    ++++    gl++++++l+ll++v+++l l   ++
  EPX71650.1 242 nevvaKRLSGTELLKKWLVLLSMKkplHMLvtqpILICIAFTVGTIYGIlslvLIAFSQAW-EVLYNFNvgisGLMYVSITLGLLCAVFLALPLNQKFY 339
                 8888855555555553444444442223324455788889999878888665555555555.6666666767799****99*****9999994444444 PP

       MFS_1 268 sdrlgr.......rrrlllallllllaalglallavtssavllllvlvl....iGfglgfvfpsllalasdlappeeagtasglfntags 346
                 ++ l+r       ++rl ++++++ll++ g++++++t ++ ++++v ++    +G g+ +++ +l+ +++d ++  ++++as+++ +++ 
  EPX71650.1 340 IKLLQRnggesepEFRLPMGIIGCLLFVTGILIFGWTANYRVFWFVPLIgstlLGAGYIMTNNPLNMYVVDTYG-IYSASASAAVRVLQL 428
                 4554444445566********************************77777777********************7.666667776666555 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.021
       MFS_1 133 GailgpllggllasslgWravfyilaivsllafv.lfllllpeep 176
                   ++ pl++  l++ lg+ +   +la+++l++ + l ll+++ ++
  EPX71650.1 430 FGAIFPLFAESLYQRLGYGWGCTLLAFILLFCSIsLPLLYFFGPR 474
                 457889999999999999999999999999998887777777665 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1  28.7   2.5e-09   1.5e-05      18     432 ..      45     459 ..      38     476 .. 0.70

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 2.5e-09
                 CGGGTHHHHHHHHTSTT--...SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHH CS
    Sugar_tr  18 vigafltllkfaknfglsk...sksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvG 113
                 vi++++ l+++  n ++ +    +++  +s + ++l + ++++G ++G l++ +l++ fGR++++l++  +f   ++ +a++    ++e+++v R+++G
  EPX71650.1  45 VISTMSFLNQYGANVFAPSiptISKEFHSSRTVVTLGTTLYSLGVLFGILIFAPLSEQFGRRPIYLTGYSVFALLQIPIALSV---NLEMFLVFRFFSG 140
                 55555555554444333220002233334788999***********************************************9...9************ PP

                 HHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHHHHHHHHHHG.GGS---HHHH.HHTT-HHHHHHH CS
    Sugar_tr 114 igvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglglnktsnadgwrillglqlvpallllill.lflPESPryl.vekgkeeeakev 210
                  +  +        ++ +  kk Rg+ + +y + +++G  va i+  ++ +++   gwr+ +++ l+++ +ll++  l+l E+  y  + ++ + e +  
  EPX71650.1 141 CFGSVGMSNGAGSLADLFEKKDRGKYMIVYFTLLSLGPGVAPIISGFITQSTI--GWRWEFWILLILSGVLLLFSfLLLKET--YPpILNRMKLERTGE 235
                 875555555555678999***********************998877655555..7******99999877777763789999..553444444455555 PP

                 HHHHHHCHHHHHHHHHHHHHHHHHHH.....HTTHHHHSH........HHHHHHHHHHHHHHTTHHHHHHHT....TTHHH..HSS-THHHHHHHHHHH CS
    Sugar_tr 211 laklrgeedadrelaeekdsleaeqeeekaswkellsskt.....vrqrlligvvlqifqqltGinaimyys....ptife..nlglsksllvtiivgv 298
                 l +l ++e + ++l      +e       ++w  lls+k+     v+q++li+++  +++   Gi ++  ++     +++   n+g+s  ++v+i +g 
  EPX71650.1 236 LGELGENEVVAKRLS----GTELL-----KKWLVLLSMKKplhmlVTQPILICIAFTVGT-IYGILSLVLIAfsqaWEVLYnfNVGISGLMYVSITLGL 324
                 666333333333332....22222.....3388888888888888899999999988776.56888877776222223333146777777999999998 PP

                 HHHHHHHHHHHHHHHS-SHHHHHHH.........HHHHHHHHHHHH...HHHHTTSS...CHHHHHHHHHHHHHHHTTTTHHHHHHHHHHSHTTTHHHH CS
    Sugar_tr 299 vnfvatfvaiflvdrfGRRtllllG.........aagmaicfvilg.ivalllvakskaasivaivfialfialfalgwgpvpwvlvsElfpqsvRska 387
                 + +  +f a++l  +f  + l   G          +g + c+++++ i  + ++a+  +  +v +++  l  a + ++ +p+  ++v +++     ++a
  EPX71650.1 325 LCA--VFLALPLNQKFYIKLLQRNGgesepefrlPMGIIGCLLFVTgILIFGWTANYRVFWFVPLIGSTLLGAGYIMTNNPLN-MYVVDTYGIY-SASA 419
                 765..567889999999999988889999999987777777777777889999999999999999999999999999999998.6666665432.2344 PP

                 HHHHHHHHHHHHHHHHHHHHHHHCHHHT-HHHHHHHHHHHHHHHH CS
    Sugar_tr 388 laiavavnwlanflisllfpiiteaigggyvflvfaglavlfiif 432
                 +a + +++ ++  +  l+   + +++g     + +++ +++fi+ 
  EPX71650.1 420 SAAVRVLQLTFGAIFPLFAESLYQRLG-----YGWGCTLLAFILL 459
                 555555555555555555555555555.....3333333333332 PP

>> MFS_4  Uncharacterised MFS-type transporter YbfB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   2.3   5.2e-09   3.1e-05      11     171 ..      59     219 ..      55     227 .. 0.91
   2 ?   -3.2   0.2      0.64   3.8e+03     201     218 ..     391     408 ..     378     459 .. 0.69

  Alignments for each domain:
  == domain 1  score: 23.4 bits;  conditional E-value: 5.2e-09
       MFS_4  11 sytpiLPallaegqlslsqagllaaaNylGYLvGallaafalsagaeRlrllagllatvllllamaltesfaaflliRflaGvasAvvlvfgsslvlah 109
                 +++p +P + +e + s + + l  +   lG L G l++a   ++   R   l g  + +ll +  al  ++ +fl+ Rf +G  + v +  g+      
  EPX71650.1  59 VFAPSIPTISKEFHSSRTVVTLGTTLYSLGVLFGILIFAPLSEQFGRRPIYLTGYSVFALLQIPIALSVNLEMFLVFRFFSGCFGSVGMSNGAGSLADL 157
                 699*******************9*************9977777777777799999999***************************************** PP

       MFS_4 110 aaaarrervgallfaGvGlGiavsgllvllllqlglsasslWlalavlsavllllvalllpr 171
                  +++ r++ + + f    lG  v+ ++  ++ q   ++ +  ++l +ls vlll ++lll++
  EPX71650.1 158 FEKKDRGKYMIVYFTLLSLGPGVAPIISGFITQSTIGWRWEFWILLILSGVLLLFSFLLLKE 219
                 **************98888888888888889999999999888889***********99984 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 0.64
       MFS_4 201 glaGfGYiitatFlvaia 218
                  l G+GYi+t   l  ++
  EPX71650.1 391 TLLGAGYIMTNNPLNMYV 408
                 455666666554444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (486 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       734  (0.0409393); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.28s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 3418.35
//
Query:       EPX71651.1  [L=530]
Description: hexose transporter Ght5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.6e-111  372.2  27.9   4.4e-111  371.9  27.9    1.0  1  Sugar_tr  Sugar (and other) transporter
    1.1e-15   57.4  26.4      2e-10   40.1   6.7    2.1  2  MFS_1     Major Facilitator Superfamily
     0.0074   16.1   0.1      0.033   14.0   0.1    2.1  1  ORMDL     ORMDL family


Domain annotation for each model (and alignments):
>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  371.9  27.9  7.3e-115  4.4e-111       3     452 .]      11     469 ..       9     469 .. 0.95

  Alignments for each domain:
  == domain 1  score: 371.9 bits;  conditional E-value: 7.3e-115
                 HHHHHHHHHHHHHHHCGGGTHHHHHHHHTST..T--SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTT CS
    Sugar_tr   3 lvaalggllfgYdtgvigafltllkfaknfg..lsksksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgk 99 
                 ++++++g ++g dtg i++++ + +f+++f   ++++++++  ss +++li+++ +vG++ G++++ +l++ +G++ s+ + +++++ g ++q++a   
  EPX71651.1  11 VFVSMAGWMNGADTGSISGITHMRDFQSKFAdrYDQKTNTYSYSSARQSLITGMINVGSFTGCYLSAPLAEAVGKRISIFVWCIVYITGVIVQMTAS-- 107
                 67899********************9988864344444444449**************************************************999.. PP

                 SS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHH.HTSS-.TTHHHHHHHCCHHHHHHHHHHGGGS---HH CS
    Sugar_tr 100 nsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglgl.nktsn.adgwrillglqlvpallllilllflPESPr 196
                  s+ ++++++v +G++vG++sv++P y+sE+Ap++lRga+v+ yql+it+Gi+vaa++++g+ ++t++ +  wr+ +g++l++  + l++++flPESPr
  EPX71651.1 108 PSWIQIVIAKVWTGFAVGATSVIAPGYQSEVAPASLRGAIVTTYQLFITAGIFVAACINMGThKYTHYkSASWRVSMGMNLLWGFITLVGITFLPESPR 206
                 89************************************************************55555599***************************** PP

                 HHHHTT-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH.........HTTHHHHSH...HHHHHHHHHHHHHHTTHHHHHHHTTTHHHHSS-THHHH CS
    Sugar_tr 197 ylvekgkeeeakevlaklrgeedadrelaeekdsleaeqeee....kaswkellssktvrqrlligvvlqifqqltGinaimyysptifenlglsksll 291
                 yl+  gk+eea e+++k ++ +++++++++e++ ++a  e e     a+w e++++ ++r r+l+g+++++fqqltG n+ +yy +++f+n g+s +++
  EPX71651.1 207 YLIAIGKDEEALEIMSKNNDIPKEHKSIQDEYHLIKADCEIElaggPAKWYEIFGK-EIRFRTLLGFAVMSFQQLTGANYYFYYCTQVFKNSGISSPYA 304
                 *****************8888*****************9999**************.89**************************************** PP

                 HHHHHHHHHHHHHHHHHHHHHHS-SHHHHHHHHHHHHHHHHHHH....HHHHTTSS......CHHHHHHHHHHHHHHHTTTTHHHHHHHHHHSHTTTHH CS
    Sugar_tr 292 vtiivgvvnfvatfvaiflvdrfGRRtllllGaagmaicfvilg..ivalllvaks...kaasivaivfialfialfalgwgpvpwvlvsElfpqsvRs 385
                 +  i+  vn++ t++a+f+ ++fGRR  l++G++ ++icf+i++  +  +l+++     + a+ v+i+f ++f+a fa++w+p  +v+v E +p + Rs
  EPX71651.1 305 AACILDGVNVFCTVFAMFVLEQFGRRMPLIVGGIWQSICFFIYSavGDKALYRNDGssnQQAGAVLIAFSCFFVASFAVTWAPAAYVIVGESYPVRYRS 403
                 ********************************************8644444444436899*************************************** PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHCHHHT-HHHHHHHHHHHHHHHHHHHHS--STT--CCCCGGGT CS
    Sugar_tr 386 kalaiavavnwlanflisllfpiiteaigggyvflvfaglavlfiifvfffvpetkgrtleeieelf 452
                 k++a+a+  nwl+ f++s+++p+it+ ig +++++vfa++++++ +++f+f  etkg+tlee+++++
  EPX71651.1 404 KCAALATSGNWLFDFVVSFFTPFITNIIG-FKYGYVFAVCNLIGSVIIFLFAHETKGLTLEEVNQVY 469
                 *****************************.**********************************986 PP

>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.1   6.7   3.4e-14     2e-10      10     254 ..      16     307 ..       4     312 .. 0.70
   2 !   22.9  11.9   5.8e-09   3.5e-05      46     179 ..     314     459 ..     311     490 .. 0.75

  Alignments for each domain:
  == domain 1  score: 40.1 bits;  conditional E-value: 3.4e-14
       MFS_1  10 larsi...lgpalpl.alaedlg...............ispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfa.sslw.l 87 
                 +++++   +g++  + ++ +d++               +s + ++l++++  +g++ + ++ ++l++ +G r  +++  ++++ g ++  ++ s++w  
  EPX71651.1  16 AGWMNgadTGSISGItHM-RDFQskfadrydqktntysYSSARQSLITGMINVGSFTGCYLSAPLAEAVGKRISIFVWCIVYITG-VIVQMTaSPSWiQ 112
                 333334443333333233.333333334444444444499999******************************555555566666.444443399999* PP

       MFS_1  88 llvlrvlqGlgagalfpagaaliadwfpkeergraigllsagfslGailgpllgg....lla.sslgWravfyilaivsllafvlfllllpeepperkr 181
                 ++++ v +G++ ga   ++  + ++++p + rg  +  +++++ +G+ +++ +      +    s++Wr+++ ++ + +++ +v ++ +lpe+p+    
  EPX71651.1 113 IVIAKVWTGFAVGATSVIAPGYQSEVAPASLRGAIVTTYQLFITAGIFVAACINMgthkYTHyKSASWRVSMGMNLLWGFITLV-GITFLPESPRYLIA 210
                 *************************************************999988455533335556**************977.66999888888888 PP

       MFS_1 182 kspkeee...............................kgtgpaplvpawkallkdpvlwillialllfffgfsglltllplylqevlglsglllagll 249
                   + ee                                   gpa+    w +++ +   +  l+++++++f   +   + + y  +v++ sg +++   
  EPX71651.1 211 IGKDEEAleimsknndipkehksiqdeyhlikadceieLAGGPAK----WYEIFGKEIRFRTLLGFAVMSFQQLTGANYYFYYCTQVFKNSG-ISSP-- 302
                 877777799999999988888876666666666664444444444....5556666644447777777764444444444445667777665.6666.. PP

       MFS_1 250 lalla 254
                 +a+++
  EPX71651.1 303 YAAAC 307
                 55555 PP

  == domain 2  score: 22.9 bits;  conditional E-value: 5.8e-09
       MFS_1  46 avaslplGrlsdrfGrrrvlllglllfalglllll.f...a...........sslwlllvlrvlqGlgagalfpagaaliadwfpkeergraigllsag 129
                 ++ +++++++ + fGrr  l++g ++ ++++++ + +   a           ++  l++++ ++ + +a + +pa+++++ + +p + r++  +l+++g
  EPX71651.1 314 VFCTVFAMFVLEQFGRRMPLIVGGIWQSICFFIYSaVgdkAlyrndgssnqqAGAVLIAFSCFFVASFAVTWAPAAYVIVGESYPVRYRSKCAALATSG 412
                 567899************************555553344415555554443333334555555666666788899************************ PP

       MFS_1 130 fslGailgpllggllasslgWravfyilaivsllafvlfllllpeepper 179
                 + l   +   + ++++  +g+ +  y++a+  l++ v+  ++l++ +++ 
  EPX71651.1 413 NWLFDFVVSFFTPFITNIIGFKYG-YVFAVCNLIGSVI--IFLFAHETKG 459
                 ********************9987.6777777777676..5554444444 PP

>> ORMDL  ORMDL family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.1   5.4e-06     0.033       9      76 ..     410     476 ..     405     489 .. 0.92

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 5.4e-06
       ORMDL   9 skglwviyiviilllkllllalpgvseevawtltnlvhnlvtyillHwikGtPfetadqgeydeltlW 76 
                   g w++ +v+ +++ ++ +++ g++  +++ ++nl+ +++ +++ H +kG   e+++q  +++l  W
  EPX71651.1 410 TSGNWLFDFVVSFFTPFITNII-GFKYGYVFAVCNLIGSVIIFLFAHETKGLTLEEVNQVYFSNLKPW 476
                 6789***999999999999999.9***********************************999999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (530 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       911  (0.0508115); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.24s 00:00:00.82 Elapsed: 00:00:00.40
# Mc/sec: 4000.71
//
Query:       EPX71652.1  [L=534]
Description: D-lactate dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-55  189.0   0.0    1.4e-55  188.6   0.0    1.2  1  FAD-oxidase_C  FAD linked oxidases, C-terminal domain
    1.2e-31  109.3   0.0    1.9e-31  108.6   0.0    1.3  1  FAD_binding_4  FAD binding domain
  ------ inclusion threshold ------
        1.2    9.5  13.3        3.3    8.2  13.3    1.8  1  EGF_2          EGF-like domain


Domain annotation for each model (and alignments):
>> FAD-oxidase_C  FAD linked oxidases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.6   0.0   2.4e-59   1.4e-55       1     249 [.     279     531 ..     279     532 .. 0.99

  Alignments for each domain:
  == domain 1  score: 188.6 bits;  conditional E-value: 2.4e-59
                    --SEEEEEEEEESSHHHHHHHHHHHHHH.T---SEEEEE-HHHHHHHHHTS-SSTTS-TTT-EEEEEEEEE-HHHHHHHHHHHHHHHTTT-EEEEE CS
  FAD-oxidase_C   1 lpearavalvafpsfeaavkavreiaqa.giipaalelmdkkaldlveatkgakkglpdeeealllvefegddeeeaeeelealveaileatgaad 95 
                    +p++++ a++++ps+ +++ka+++++++  +i++a+elmd+++  ++ +++  +++++de ++++++e++g+++++++e+l ++ve++ e+  +++
     EPX71652.1 279 KPRSTNAAFLGLPSYNNVLKAFSTAKFHlSEILSAFELMDNTSQIFMDSHSSIPRPIKDEYPFYVFIETQGSSSNHDHEKLCRVVEELKEQKLIGE 374
                    6999*****************************************************************************99************* PP

                    ..........ETGGGGGGGGHHHHHHHHHCTTEEEEEEEEEEEHHHHHHHHHHHHHHHHHHH..........EEEEEEEEEETTEEEEEEEEEEE. CS
  FAD-oxidase_C  96 vlvaqdeaeaealwkaRkaalpylrdallkagvavlseDtsvPvsrladlvrdikalldkyg..........levvlfgHagdgnlhlyilfdlad 181
                    +++a+d+++++++   R +       +l++ g+ ++++D+s+P++ l dlv ++k++l++ +          ++vv fgH+gdgnlh+++l +   
     EPX71652.1 375 GAIAKDDKQIDEFVLRRVKTAG----CLQDVGSGIYKYDVSLPLDILFDLVYATKERLKDLNligdapgqpvIDVVGFGHVGDGNLHMNVLSRKLE 466
                    **********************....99******************************************************************** PP

                    .--TT--THHHHHHHHHHHHTT-----------------------THHHHHHHHHHHH-TT--BSTT- CS
  FAD-oxidase_C 182 eaeeeraeklvdevvdlavelgGsisgEHGvGldkkaylerekgeeglalmrriKaalDPkgiLNPgk 249
                    ++ e+++e++v  +   ++++ Gsis EHG G+ kk+y+ ++k++e + lm+ iK ++DP+gi+ P+k
     EPX71652.1 467 KKVEDALEPWVFAW---VASHEGSISSEHGLGFLKKPYVGYSKTPEMISLMKTIKHVIDPNGIMLPYK 531
                    **************...*************************************************99 PP

>> FAD_binding_4  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.6   0.0   3.2e-35   1.9e-31       2     136 ..     120     255 ..     119     257 .. 0.98

  Alignments for each domain:
  == domain 1  score: 108.6 bits;  conditional E-value: 3.2e-35
                    EEEEEESSHHHHHHHHHHHHHCTSCEEEESSSTTEESTTC.SCCEEEEEETTS--EEEEETTTTEEEEETTSBHHHHHHHHHHHTTECSSGGGTTC CS
  FAD_binding_4   2 aavvrpeseeevaaalrlaneaglpvlvrGgGssllgqav.atggvvldlsrlnrileideeegtatveaGvtlgdlvealaakglllglepgsgi 96 
                    ++v++p+++e+v+ +l+++n+++l v+++Gg ++++g+++  ++ ++++l  +n+i+ +de +g++ + aGv+l+d++++l  k  +++l+ g+ +
     EPX71652.1 120 RLVIKPKTTEQVSQILKYCNSRRLAVVPQGGNTGFVGGSIpVFDEIIINLGLMNHIHGFDELTGILNLDAGVILEDADNYLVSKDHIFPLDIGARK 215
                    589************************************999********88******************************************** PP

                    GSBHHHTTTTT-EETTEEGG--HHGTEEEEEEEETTSEEE CS
  FAD_binding_4  97 pgtvGGaiatnagGygsekyGlirdnvlglevvladGevv 136
                    ++ vGG  +t agG +  +yG+++ n+ g+e+vl+dG+++
     EPX71652.1 216 SCQVGGCASTSAGGLRLMRYGNLHGNIIGMEAVLPDGTIL 255
                    **************************************97 PP

>> EGF_2  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2  13.3   0.00055       3.3       7      26 ..       7      26 ..       2      39 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00055
       EGF_2  7 iCgghGtCvnqcGqCdCdsg 26
                +C+  G+C+n++G+C+C+++
  EPX71652.1  7 ECKHKGSCNNENGKCSCQTQ 26
                6****************543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (534 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       722  (0.04027); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.41
# Mc/sec: 3925.64
//
Query:       EPX71653.1  [L=513]
Description: membrane transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.4e-44  150.3  73.5    3.8e-36  124.8  45.0    2.8  2  MFS_1     Major Facilitator Superfamily
     0.0002   20.4  26.9    0.00026   20.0   9.2    2.4  2  Sugar_tr  Sugar (and other) transporter


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.8  45.0   4.2e-40   3.8e-36      11     352 ..      44     439 ..      32     440 .. 0.85
   2 !   39.7  20.4   3.1e-14   2.8e-10       2     192 ..     297     502 ..     296     511 .. 0.82

  Alignments for each domain:
  == domain 1  score: 124.8 bits;  conditional E-value: 4.2e-40
       MFS_1  11 arsilgpalpl.alaedlg.ispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfa..sslw.lllvlrvlqGlgagalfp 104
                 ++++  +++p+ ++++++g  +  ++++  + y+l+ + ++l++G l+d +G++ ++++g+++++l++l+  f+  + +  +  v+r+l+G++ ++l+p
  EPX71653.1  44 QAGLGQTIAPShIIGKAFGtTNSGQLSWFPASYSLTVGTFILVAGKLGDMYGHKNMFIFGYAWYSLWSLISGFSvyAKSAiMYDVCRALTGIAPAFLLP 142
                 44444467788999*****666777******************************************777778668888889***************** PP

       MFS_1 105 agaaliadwfpk.eergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpeepperkrkspkeee.............. 188
                 +++a++ +++p+ +++  a+ +++a++  G++lg++++g+++++++W+++++  +i+++ +++  +l +p+ + e   +++ e++              
  EPX71653.1 143 NALAILGRVYPPgRRKQWAFCMFGATAPNGFLLGAVFSGIFSQLAWWPWSYWSTCIICFAFCIASYLIIPDIQEETDEEKTSEKRhfdylgtffgitgl 241
                 ************88888899*****************************************99988888888888888888888899****99999999 PP

       MFS_1 189 .....................................kgtgpaplvpawkallkdpvlw....illialllfffgfsglltllplylqevlglsgllla 246
                                                      + +   pl+p     +          ++l++++ ++++f +  ++l  +  evl  ++ ll+
  EPX71653.1 242 vlinfawnqgpvvgwhvpyvyilliigvlsmvvfiyvEHKTLEPLLP--PDAF-----TgeigFILMCIAAGWACFGIWIYYLWNF-FEVLRQNTPLLT 332
                 99998888888887777777777666666666663332222222222..2233.....1344557777777777888888888887.555555536999 PP

       MFS_1 247 glllallalvgailallagrlsdrlgrrrrlllallllllaalglallavtssavllllvlvliGf.glgfvfpsllalasdlappeeagtasglfnta 344
                 ++ +a +++ g+ +a  +g l+ r+ + + ++++++++++++++la ++  +++++  +v  +++  g+ + fp+++ ++sd++++e++g a++l++t+
  EPX71653.1 333 VAQMAPVGISGCLAAASTGTLLSRFRPIICMIISMAAFTIGTILLATAPIDQTYWAQTFVATIVTPwGMDMSFPAATLVISDFVSRENQGIAASLVSTV 431
                 99*********************************************************99998888******************************** PP

       MFS_1 345 gslggalg 352
                  + ++++g
  EPX71653.1 432 VNYSISIG 439
                 **999998 PP

  == domain 2  score: 39.7 bits;  conditional E-value: 3.1e-14
       MFS_1   2 llaaflsalarsilgpalplalaedlgispseigllltl....yalgaavaslplGrlsdrfGrrrvlllglllfalglllllfa....sslw.lllvl 91 
                  ++++++a++++++g+++  +l + + +  +   ll+++    +++  ++a+  +G l  rf +  ++++++++f +g ++ll +    +++w   +v+
  EPX71653.1 297 GFILMCIAAGWACFGIWIY-YLWNFFEVLRQNTPLLTVAqmapVGISGCLAAASTGTLLSRFRPIICMIISMAAFTIG-TILLATapidQTYWaQTFVA 393
                 57899999*****999999.9999999999999999999666666677999999999999**7777************.5555223578999*99**** PP

       MFS_1  92 rvlqGlgagalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslg.........Wravfyilaivslla...fvlfllllpeeppe 178
                  +++ +g+ ++fpa+  +i+d +++e++g a +l+s+ ++ ++ +g +++g +  +l+         +r+++y+  +++ l+    +l+++ll+++p++
  EPX71653.1 394 TIVTPWGMDMSFPAATLVISDFVSRENQGIAASLVSTVVNYSISIGLGIAGTIEVHLNhkgtnilrgYRSAWYMGIGFGGLGvgvSILAAVLLFTKPSK 492
                 ***************************************************888788888889999977775554444444432255899999999999 PP

       MFS_1 179 rkrkspkeeekgtg 192
                 r+ + +  e    +
  EPX71653.1 493 RASDVESAE----E 502
                 888887777....3 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   9.2   2.9e-08   0.00026      47     190 ..      68     209 ..      30     224 .. 0.86
   2 !    6.0   9.7   0.00051       4.6      58     196 ..     342     493 ..     296     508 .. 0.72

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 2.9e-08
                 HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHH.HH CS
    Sugar_tr  47 lsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvsl.yq 144
                 +++++ +++++      l+ag+lgd++G k+ ++++ + ++  +++++++  ++s  ++ v+R l+Gi+  +    +   ++ + p+  R++   + + 
  EPX71653.1  68 QLSWFPASYSLTVGTFILVAGKLGDMYGHKNMFIFGYAWYSLWSLISGFSVYAKSAIMYDVCRALTGIAPAFLLPNALAILGRVYPPGRRKQWAFCmFG 166
                 5666766666544444599********************************99*************************************988765155 PP

                 HHHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHHHHHHHHHHGGG CS
    Sugar_tr 145 laitfGilvaaifglglnktsnadgwrillglqlvpallllilllf 190
                      G+l++a+f  ++++      w++  ++++++  +++i+ ++
  EPX71653.1 167 ATAPNGFLLGAVFSGIFSQLAW---WPWSYWSTCIICFAFCIASYL 209
                 66668****************9...**********99999998754 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.00051
                 HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTT.SS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHH....HHHHHHHHHHHHH CS
    Sugar_tr  58 GaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgk.nsvevlivgRvlvGigvGlasvlvPmyisEiApkklRga....lvslyqlaitfGi 151
                  + + +  +g+l  rf    +++i+ + f ig++l a+a+ + + + + +v+ +++  g+ +    +++ is +   +  g+    + ++ + +i++G 
  EPX71653.1 342 SGCLAAASTGTLLSRFRPIICMIISMAAFTIGTILLATAPIDqTYWAQTFVATIVTPWGMDMSFPAATLVISDFVSRENQGIaaslVSTVVNYSISIGL 440
                 334455566677777777889999****************994555589999*********************99888777611114556788999999 PP

                 HHHHHHHHHH.HTSS-.......TTHHHHHHHCCHHHHHHHHHHGGGS---HH CS
    Sugar_tr 152 lvaaifglgl.nktsn.......adgwrillglqlvpallllilllflPESPr 196
                  +a ++ + l  k +n       a+ + i +g   v   +l+++llf   S+r
  EPX71653.1 441 GIAGTIEVHLnHKGTNilrgyrsAWYMGIGFGGLGVGVSILAAVLLFTKPSKR 493
                 99999999994445559999977777777765444444444444444444655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (513 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       852  (0.0475208); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.31s 00:00:00.98 Elapsed: 00:00:00.48
# Mc/sec: 3185.22
//
Query:       EPX71654.1  [L=275]
Description: hypothetical protein SOCG_01869 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (275 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       510  (0.0284455); expected 358.6 (0.02)
Passed bias filter:                      252  (0.0140554); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 1964.68
//
Query:       EPX71655.1  [L=143]
Description: hsp16-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-20   72.5   1.2      3e-20   72.3   1.2    1.1  1  HSP20       Hsp20/alpha crystallin family
    1.5e-12   46.9   0.0    2.4e-12   46.2   0.0    1.4  1  ArsA_HSP20  HSP20-like domain found in ArsA
     0.0028   18.6   0.5      0.013   16.5   0.4    2.0  1  CS          CS domain
     0.0089   16.4   0.0      0.012   16.0   0.0    1.3  1  PIH1_CS     PIH1 CS-like domain
  ------ inclusion threshold ------
       0.11   12.7   0.0       0.13   12.5   0.0    1.2  1  Cohesin     Cohesin domain
       0.12   12.5   0.3         19    5.4   0.0    2.2  2  FKBP26_C    FKBP26_C-terminal


Domain annotation for each model (and alignments):
>> HSP20  Hsp20/alpha crystallin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.3   1.2   9.9e-24     3e-20       1     101 [.      40     142 ..      40     143 .] 0.91

  Alignments for each domain:
  == domain 1  score: 72.3 bits;  conditional E-value: 9.9e-24
                 E--SSEEEEEEEEE-TT--CCCEEEEEETTEEEEEEE--......---TT----SS---EEEEEE--STTB-TTT-EEEEETTEEEEEEEBSS--..-- CS
       HSP20   1 dikeeeeefevkldvpglkkeelkvkvednrvlvkgehe....eeeedekglikerssrkFsrkftLPenvdadkvkaslkdGvLtvtvpkkepekkkk 95 
                 d++e ++  ev +++pg+kk++++v++++++++++ge      +e ++++  ++er+ ++Fsr++t+P+ vdad+++a+++ G+L++ +pk e+   ++
  EPX71655.1  40 DVHEGKDTVEVDVELPGVKKQDVQVHYDEGKLTISGESVnerkSESDKGNQRWSERRFGSFSRTITIPNRVDADRIEAQFNHGILSIVMPKIEES--RS 136
                 67899*******************************98866656666778899**************************************9998..67 PP

                 ------ CS
       HSP20  96 erkiqi 101
                  ++++i
  EPX71655.1 137 RKQVSI 142
                 788877 PP

>> ArsA_HSP20  HSP20-like domain found in ArsA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.2   0.0   8.2e-16   2.4e-12       2      63 .]      46     128 ..      45     128 .. 0.98

  Alignments for each domain:
  == domain 1  score: 46.2 bits;  conditional E-value: 8.2e-16
  ArsA_HSP20   2 deyvlkldLPfvdkeeidlsrsgdeLtIkig......................nfrRqitLPsvlarkevtsAkfedgvLeIrF 63 
                 d ++++++LP+v+k++++++ ++  LtI+ +                      +f+R+it P++++++++  A+f+ g L I +
  EPX71655.1  46 DTVEVDVELPGVKKQDVQVHYDEGKLTISGEsvnerksesdkgnqrwserrfgSFSRTITIPNRVDADRI-EAQFNHGILSIVM 128
                 7899******************************************************************.***********86 PP

>> CS  CS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.4   4.4e-06     0.013       6      60 ..      42     114 ..      37     130 .. 0.69

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 4.4e-06
                 EEETTEEEEEEE-TTCTTTTTCEEEEEETTEEEEEE...TS.CEEEEECE................BSS-BETTT CS
          CS   6 yQtldeVvvtiyvkkvnikkkdvkvefkerslkvki...gk.eklliege................LfgpIdpee 60 
                 ++ +d+V+v +++++v  kk+dv+v+  e +l+++    ++ +++ ++g+                  + +d + 
  EPX71655.1  42 HEGKDTVEVDVELPGV--KKQDVQVHYDEGKLTISGesvNErKSESDKGNqrwserrfgsfsrtitIPNRVDADR 114
                 67789**********9..*************99998655444555555546666666666555555555555555 PP

>> PIH1_CS  PIH1 CS-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   3.9e-06     0.012      32      87 ..      47     121 ..      19     129 .. 0.88

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 3.9e-06
     PIH1_CS  32 elaieielPllksikevklrvgerrlel....................eskk.akyfLslkLpYpvdedkveAkFvk 87 
                 +  +++elP++   ++v+++++e +l +                    e ++  ++  ++++p +vd d++eA+F++
  EPX71655.1  47 TVEVDVELPGV-KKQDVQVHYDEGKLTIsgesvnerksesdkgnqrwsE-RRfGSFSRTITIPNRVDADRIEAQFNH 121
                 56799******.6799999999999999***************999744.336999999****************97 PP

>> Cohesin  Cohesin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   4.4e-05      0.13      14      58 ..      46      83 ..      39     135 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 4.4e-05
                SEEEEEEEEESECTTEEEEEEEEEE.TTTEEEEEEEE-TTS.SSGG CS
     Cohesin 14 dtvtvpvtvsnvskkvaaaqftikYDpavlevvsvkaGsiv.knss 58
                dtv+v v++ +v+k    ++++++YD  +l+++    G+ v + +s
  EPX71655.1 46 DTVEVDVELPGVKK----QDVQVHYDEGKLTIS----GESVnERKS 83
                89************....***************....555432222 PP

>> FKBP26_C  FKBP26_C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0    0.0083        25      10      32 ..      51      73 ..      44      76 .. 0.86
   2 ?    5.4   0.0    0.0065        19      15      37 ..     109     131 ..     102     133 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0083
                HHH-TT--..--EEEEETTEEEE CS
    FKBP26_C 10 kryiPnidlekfkieiedktvtI 32
                 + +P ++++++++ ++++++tI
  EPX71655.1 51 DVELPGVKKQDVQVHYDEGKLTI 73
                4557*****************99 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.0065
                 T--..--EEEEETTEEEEE--TT CS
    FKBP26_C  15 nidlekfkieiedktvtIelpee 37 
                 ++d++ ++ +++ ++++I +p+ 
  EPX71655.1 109 RVDADRIEAQFNHGILSIVMPKI 131
                 69*******************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       392  (0.021864); expected 358.6 (0.02)
Passed bias filter:                      303  (0.0169); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1098.61
//
Query:       EPX71656.1  [L=257]
Description: hypothetical protein SOCG_01871 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
        2.5    7.6  12.8        4.1    6.9  12.8    1.4  1  DUF1700        Protein of unknown function (DUF1700)
        8.6    6.1   8.2          4    7.2   5.6    1.7  1  FA_desaturase  Fatty acid desaturase


Domain annotation for each model (and alignments):
>> DUF1700  Protein of unknown function (DUF1700)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9  12.8   0.00046       4.1      91     147 ..     167     223 ..     140     240 .. 0.70

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.00046
     DUF1700  91 lnlilvlipliviislvlsllvvalallvsplvllvksllkgfeelslnvfvsigll 147
                 + +++    l+  i+ ++ l++ ++++lvs++ l ++sl++g++ + +++f +i+ +
  EPX71656.1 167 YMFLFFCSLLVDFIVTLIPLVLSGTTMLVSGISLFLSSLFSGIFLFLSSLFSGISSF 223
                 223333444555666677888888888999999999999999998888888888765 PP

>> FA_desaturase  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   5.6   0.00045         4      96     178 ..     117     195 ..      97     217 .. 0.70

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.00045
  FA_desaturase  96 llrlllgllvlg.wllalvlglwlrrlarrrapsksrrrkwrllawlllllawlglwlalllllglall..lwlvplllllfllal 178
                    +l++ l    +  ++++     +++ +   ++++k++ + w  + ++++l+  +++++++l++ +l++   + l+pl+l ++++ +
     EPX71656.1 117 RLGWCLNGSIILnFIFS-----YKYLVPFIKESMKESVWLWFQIPVAVVLV--IATFYMFLFFCSLLVDfiVTLIPLVLSGTTMLV 195
                    44444444444424333.....66666777777777776666666666666..999999999999988889999999999887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1046  (0.0583412); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.30s 00:00:00.82 Elapsed: 00:00:00.45
# Mc/sec: 1698.54
//
Query:       EPX71657.1  [L=239]
Description: hypothetical protein SOCG_01872 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.29   10.6   1.3       0.65    9.4   1.3    1.5  1  Flp1_like  Putative Flagellin, Flp1-like, domain
          6    7.4   8.9        6.9    7.3   1.2    2.7  3  PRRSV_2b   Porcine reproductive and respiratory syndrome viru


Domain annotation for each model (and alignments):
>> Flp1_like  Putative Flagellin, Flp1-like, domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   1.3   7.2e-05      0.65       9      28 ..      78      97 ..      76     102 .. 0.92

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 7.2e-05
   Flp1_like  9 vgvVEiiLIivVligLvliF 28
                +g+V ii I+  l+ L++iF
  EPX71657.1 78 IGTVTIITILYNLVFLAIIF 97
                79****************** PP

>> PRRSV_2b  Porcine reproductive and respiratory syndrome virus 2b
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   1.2   0.00077       6.9      23      48 ..      83     108 ..      78     115 .. 0.81
   2 ?    4.3   0.5    0.0065        58      11      39 ..     116     145 ..     111     168 .. 0.84
   3 ?   -1.6   0.0      0.45     4e+03      52      63 ..     209     222 ..     204     230 .. 0.72

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.00077
    PRRSV_2b  23 lvsivdiiiflaillgftiagwlvvf 48 
                 +++i+  ++flai++g+ ++ + + f
  EPX71657.1  83 IITILYNLVFLAIIFGYKVSPYSIAF 108
                 56777778**********99887776 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.0065
    PRRSV_2b  11 igqlfvdafteflvsivdii.iflaillgf 39 
                 ig +f+  ++e+ +s  +i  +flail+ +
  EPX71657.1 116 IGTIFIFLLSELRISCSQITdLFLAILVTY 145
                 9999***********9999768*****875 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 0.45
    PRRSV_2b  52 lvcsa..vlrarpa 63 
                 lvcs+  + r rp 
  EPX71657.1 209 LVCSShsISRNRPP 222
                 89985348899986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       738  (0.0411624); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 1632.07
//
Query:       EPX71658.1  [L=288]
Description: meiotic expression up-regulated protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.6e-16   60.4   0.3      1e-15   58.5   0.0    2.2  2  DUF1773        Domain of unknown function
  ------ inclusion threshold ------
      0.042   13.3   0.4      0.059   12.8   0.4    1.2  1  Pet127         Mitochondrial protein Pet127
       0.75    8.6   8.1        0.6    8.9   6.2    1.6  2  DNA_topoisoIV  DNA gyrase/topoisomerase IV, subunit A
       0.98    9.5  16.1       0.21   11.7  10.1    2.3  2  PKK            Polo kinase kinase
        2.6    8.1   4.0         83    3.2   0.1    3.3  3  ChW            Clostridial hydrophobic W
        2.7    8.5   9.6        4.2    7.8   9.6    1.3  1  AAA_23         AAA domain


Domain annotation for each model (and alignments):
>> DUF1773  Domain of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       3.5     1e+04      47      55 ..      31      39 ..      30      40 .. 0.79
   2 !   58.5   0.0   3.5e-19     1e-15       2      58 .]     196     251 ..     195     251 .. 0.98

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 3.5
     DUF1773 47 nvLSQlsfF 55
                +++++ls++
  EPX71658.1 31 ENITELSRY 39
                578999999 PP

  == domain 2  score: 58.5 bits;  conditional E-value: 3.5e-19
     DUF1773   2 flfsknldfskrksgysassvpflngeepedeePLLpdigsilDinvLS..QlsfFLpG 58 
                 +++ ++++++ r+ g+s+  vpf ng+ep d +  Lp+i+si+Di++L+  Q++++L+G
  EPX71658.1 196 YRYYRLHNIQLRSLGKSIDVVPFVNGQEP-DFD--LPQIHSIEDIENLTkdQCTRYLDG 251
                 7899*************************.***..***********************9 PP

>> Pet127  Mitochondrial protein Pet127
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.4     2e-05     0.059      48     145 ..     101     208 ..      68     226 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2e-05
      Pet127  48 sslskaf.eekskkftklarlpasvilrkkekvyaidsdksldkeiiLsalGkslEklLtleeeefekylkkeksek.........akeeekkeaYnys 136
                 + l+++  ++  + f ++ + p++ +l  k++++++d+ ++   e +     + lE+l t ++++ e++++++++++          +++ +k+ Y+y 
  EPX71658.1 101 KCLEESNnDQPPQWFINFFNDPNVGFLALKREMVSMDARQNQRLEALENRQNQRLEALETRQNQRLEALETRQNRRSdvieeslrsINQKLSKQEYRYY 199
                 334443304456667899999*******9999*******999999999999*************999887766555556665555444444449***** PP

      Pet127 137 klgkfllrs 145
                 +l+++ lrs
  EPX71658.1 200 RLHNIQLRS 208
                 ********9 PP

>> DNA_topoisoIV  DNA gyrase/topoisomerase IV, subunit A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   6.2    0.0002       0.6     283     425 ..       6     184 ..       2     185 .. 0.85
   2 ?    2.5   2.6     0.018        53     314     387 ..     141     208 ..     108     213 .. 0.54

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0002
  DNA_topoisoIV 283 kLessisvnnlvlfdkk.....pkylslkeilkeflevrlevyerrkeyllekleerleilegllkalnkidevievirkskkekkakkeLieels 373
                    +L++ +s+nn  l+ ++     p++ +++e+ ++f+++r  v e+   ++ ++le+ le+++     + ++++ ++ + +++++ ++ k + ++l+
     EPX71658.1   6 HLQEDLSTNNENLYTNElgippPRQENITELSRYFIDLRGAVNEKSYLFQRHELEQGLERIT---LRTREMNFEKDYLYSNLRTLEQIKLVERRLN 98 
                    7999******999999668**9*************************************999...5667777777777777665555554444477 PP

  DNA_topoisoIV 374 e..................................eqaeyllemrlrrLtkeeveklekeieelekeikelekllaklkklikeel 425
                    +                                    +++  + rl  L + + ++le+  ++ ++++++le+  ++  ++i e l
     EPX71658.1  99 HykcleesnndqppqwfinffndpnvgflalkremVSMDARQNQRLEALENRQNQRLEALETRQNQRLEALETRQNRRSDVIEESL 184
                    77788889999***************999999999668899999999999999999999999999999999999998888887766 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.018
  DNA_topoisoIV 314 evrlevyerrkeyllekleerleilegllkalnkidevievirkskk..ekkakkeLieelseeqaey..llemrlrr 387
                    + rle +e+r++ +le           l +  n+  e +e+ +++ +   +++  ++ ++ls+++++y  l +++lr+
     EPX71658.1 141 NQRLEALENRQNQRLEA----------LETRQNQRLEALETRQNRRSdvIEESLRSINQKLSKQEYRYyrLHNIQLRS 208
                    33444444444444444..........444444444444443333322334444444444555444433344555555 PP

>> PKK  Polo kinase kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.3      0.17   4.9e+02      59     127 ..      31      89 ..      28     101 .. 0.51
   2 ?   11.7  10.1   6.9e-05      0.21      14      62 ..     131     175 ..     128     209 .. 0.81

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.17
         PKK  59 EqkkelakFkesLkqekkelkqev.reklkkfqrkeklrqkkeeleqeqkeeeleflqkqqealereleq 127
                 E  +el+++   L+   +e +    r++l +  ++ +lr ++ ++e           ++   ++ r+leq
  EPX71658.1  31 ENITELSRYFIDLRGAVNEKSYLFqRHELEQGLERITLRTREMNFE-----------KDYLYSNLRTLEQ 89 
                 5555555555555555554444444455555555555555555444...........4444444444444 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 6.9e-05
         PKK  14 qertqlkkrydkeleqlerqqkqqiEkleqeqaqelrelpkriraEqkk 62 
                  e+ ++  r ++ le le++q+q +E le +q+q+l  l  r+     +
  EPX71658.1 131 REMVSMDARQNQRLEALENRQNQRLEALETRQNQRLEALETRQN----R 175
                 6999********************************99998864....4 PP

>> ChW  Clostridial hydrophobic W
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.1     0.065   1.9e+02      22      29 ..     140     147 ..     138     148 .. 0.87
   2 ?    2.4   0.1     0.051   1.5e+02      22      30 ..     151     159 ..     149     161 .. 0.87
   3 ?    3.2   0.1     0.028        83      20      30 ..     160     170 ..     159     172 .. 0.85

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.065
         ChW  22 qglRlEAi 29 
                 q++RlEA+
  EPX71658.1 140 QNQRLEAL 147
                 89*****8 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.051
         ChW  22 qglRlEAiq 30 
                 q++RlEA++
  EPX71658.1 151 QNQRLEALE 159
                 99*****86 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.028
         ChW  20 vGqglRlEAiq 30 
                 + q++RlEA++
  EPX71658.1 160 TRQNQRLEALE 170
                 569******86 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   9.6    0.0014       4.2     111     199 ..      74     191 ..       8     196 .. 0.60

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0014
      AAA_23 111 lleideleqfise..llgskkiilnlilflgqer.......................feefel.....kdkkerleelekeleeledekk.llekleqe 178
                 ++e+d l  ++++  +++  +++ln++ +l +++                            +     +++++rle+le+ +++  +  +  +++++++
  EPX71658.1  74 NFEKDYLYSNLRTleQIKLVERRLNHYKCLEESNndqppqwfinffndpnvgflalkR----EmvsmdARQNQRLEALENRQNQRLEALEtRQNQRLEA 168
                 3333333333332335667777999999999999888888877777777777554442....1444468888899999999988655444144555555 PP

      AAA_23 179 kekek..eleeleeeleeilkel 199
                 +e ++  + + +ee l +i+++l
  EPX71658.1 169 LETRQnrRSDVIEESLRSINQKL 191
                 55555456667788888887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1376  (0.0767472); expected 358.6 (0.02)
Passed bias filter:                      540  (0.0301188); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 2089.17
//
Query:       EPX71659.1  [L=256]
Description: hypothetical protein SOCG_01874 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       714  (0.0398237); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 1788.25
//
Query:       EPX71660.1  [L=141]
Description: NADPH-hemoprotein reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      8e-20   70.8   0.1    1.1e-19   70.3   0.1    1.2  1  Cyt-b5    Cytochrome b5-like Heme/Steroid binding domain
  ------ inclusion threshold ------
       0.11   12.6   0.0       0.18   11.9   0.0    1.3  1  LysM      LysM domain


Domain annotation for each model (and alignments):
>> Cyt-b5  Cytochrome b5-like Heme/Steroid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.3   0.1   1.2e-23   1.1e-19       1      73 [.      67     138 ..      67     139 .. 0.97

  Alignments for each domain:
  == domain 1  score: 70.3 bits;  conditional E-value: 1.2e-23
                 EHHHHTTTECTTEEEEEETTEEEECTTTCCCSTTCSHHHHTTTTSBBHHHHHHTTGGCHHHHHHHHGGEEEEE CS
      Cyt-b5   1 tleelskhngkndlwvairgkVYDvskflskhpGgesailkyaGkDateafksvvhsekdaekllkkylvGkl 73 
                 ++eel+khn+k+d+w+a+rgkVY+v+ ++ +hp g++ i k+ G Dat+   +  h + + e++l++++vG l
  EPX71660.1  67 SMEELKKHNTKDDCWIAVRGKVYNVTAYAPYHPDGAKKIFKHSGIDATKQYMKA-HADVNEEEMLRTCYVGPL 138
                 579***************************************************.999999**********87 PP

>> LysM  LysM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   2.1e-05      0.18       3      29 ..      51      77 ..      50      88 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 2.1e-05
                E-TT--HHHHHHHCTCHHHHHHHHCTC CS
        LysM  3 VkkGDTLwsIAkrygitveklleaNnl 29
                V +G+ L+++A  +++++e+l++ N  
  EPX71660.1 51 VESGENLSGVAEPFKVSMEELKKHNTK 77
                89*********************9954 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1119  (0.0624129); expected 358.6 (0.02)
Passed bias filter:                      561  (0.0312901); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1104.96
//
Query:       EPX71661.1  [L=45]
Description: hypothetical protein SOCG_01876 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.3e-19   67.8   8.5    7.4e-19   67.6   8.5    1.1  1  M-factor  M-factor


Domain annotation for each model (and alignments):
>> M-factor  M-factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.6   8.5   4.1e-23   7.4e-19       1      43 []       1      45 []       1      45 [] 0.96

  Alignments for each domain:
  == domain 1  score: 67.6 bits;  conditional E-value: 4.1e-23
    M-factor  1 MDsm...AnnssSSSlvNaannkPtetvtkgvknYtPKvPyMCvIA 43
                MD++    nn   SSlvN+a++kPt+t t+g+ +Y+PK+P+MCvIA
  EPX71661.1  1 MDAInnsSNNGNNSSLVNNAPSKPTVT-TSGASWYQPKPPAMCVIA 45
                999988889999***************.*****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (45 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       259  (0.0144459); expected 358.6 (0.02)
Passed bias filter:                      146  (0.00814323); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.24s 00:00:00.58 Elapsed: 00:00:00.40
# Mc/sec: 339.83
//
Query:       EPX71662.1  [L=186]
Description: HHE domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.7e-11   43.8   0.0    5.5e-11   43.2   0.0    1.3  1  Hemerythrin  Hemerythrin HHE cation binding domain


Domain annotation for each model (and alignments):
>> Hemerythrin  Hemerythrin HHE cation binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.2   0.0   3.1e-15   5.5e-11       4     131 .]      11     127 ..       8     127 .. 0.87

  Alignments for each domain:
  == domain 1  score: 43.2 bits;  conditional E-value: 3.1e-15
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHH...CCC.HHHHHHHHHHHHHHHHHHHHHH.HHCHTCG CS
  Hemerythrin   4 ealdeeHralrallerlraladaaaevhgalrklaelldelvdeleaHhaaEEellfPlle..drpggravldvlereHdeirelleelr.ellkgle 98 
                  +++  +H +l +  + +r+  da        + + ++ +++v+el++ +  EE +++P l+    + g+++ +  ++eH++i e l +l+    +++ 
   EPX71662.1  11 KVIFNDHTELQNYYNYIRSSKDA--------DTAIRWRNQFVWELARYLVGEEIVVYPKLAkyLGDSGQEMAEKNRKEHQVIKEHLYKLQsMKPDNP- 99 
                  56677888888888888877776........66777778999999999******************************************5555555. PP

                  GSTCHHHHHHHHHHHHHHHHHHHHHHHTHHHHH CS
  Hemerythrin  99 epsaaafaelleeladllreHiakEesilfpll 131
                       af   l+++++ l  Hi++Ee++ +p l
   EPX71662.1 100 -----AFVPTLDAVMSRLQKHIEEEENLDYPQL 127
                  .....5**********************99975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       787  (0.0438954); expected 358.6 (0.02)
Passed bias filter:                      544  (0.0303419); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1409.14
//
Query:       EPX71663.1  [L=304]
Description: hypothetical protein SOCG_01878 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       460  (0.0256568); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 2293.91
//
Query:       EPX71664.1  [L=143]
Description: hsp16-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-21   75.0   0.8      5e-21   74.8   0.8    1.1  1  HSP20       Hsp20/alpha crystallin family
    1.9e-12   46.5   0.0    3.6e-12   45.7   0.0    1.5  1  ArsA_HSP20  HSP20-like domain found in ArsA
     0.0022   18.9   0.3      0.007   17.4   0.3    1.8  1  CS          CS domain
      0.008   16.6   0.0      0.011   16.2   0.0    1.3  1  PIH1_CS     PIH1 CS-like domain
  ------ inclusion threshold ------
       0.13   12.6   0.0       0.14   12.4   0.0    1.2  1  Cohesin     Cohesin domain
       0.15   12.2   0.2         25    5.1   0.0    2.2  2  FKBP26_C    FKBP26_C-terminal


Domain annotation for each model (and alignments):
>> HSP20  Hsp20/alpha crystallin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.8   0.8   1.7e-24     5e-21       1     102 []      40     143 .]      40     143 .] 0.92

  Alignments for each domain:
  == domain 1  score: 74.8 bits;  conditional E-value: 1.7e-24
                 E--SSEEEEEEEEE-TT--CCCEEEEEETTEEEEEEE--......---TT----SS---EEEEEE--STTB-TTT-EEEEETTEEEEEEEBSS--..-- CS
       HSP20   1 dikeeeeefevkldvpglkkeelkvkvednrvlvkgehe....eeeedekglikerssrkFsrkftLPenvdadkvkaslkdGvLtvtvpkkepekkkk 95 
                 d++e ++  ev +++pg+kk++++v++++++++++ge      +e ++++  ++er+ ++Fsr++t+P+ vdad+++a+++ G+L++ +pk e+   ++
  EPX71664.1  40 DVHEGKDTVEVDVELPGVKKQDVQVHYDEGKLTISGESVnerkSESDKGNQRWSERRFGSFSRTITIPNRVDADRIEAQFNHGILSIVLPKIEES--RS 136
                 67899*******************************98866656666778899**************************************9998..78 PP

                 ------- CS
       HSP20  96 erkiqiq 102
                 +r+i+i+
  EPX71664.1 137 KRQIAIN 143
                 9999985 PP

>> ArsA_HSP20  HSP20-like domain found in ArsA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.7   0.0   1.2e-15   3.6e-12       2      62 ..      46     127 ..      45     128 .. 0.97

  Alignments for each domain:
  == domain 1  score: 45.7 bits;  conditional E-value: 1.2e-15
  ArsA_HSP20   2 deyvlkldLPfvdkeeidlsrsgdeLtIkig......................nfrRqitLPsvlarkevtsAkfedgvLeIr 62 
                 d ++++++LP+v+k++++++ ++  LtI+ +                      +f+R+it P++++++++  A+f+ g L I 
  EPX71664.1  46 DTVEVDVELPGVKKQDVQVHYDEGKLTISGEsvnerksesdkgnqrwserrfgSFSRTITIPNRVDADRI-EAQFNHGILSIV 127
                 7899******************************************************************.**********97 PP

>> CS  CS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.3   2.4e-06     0.007       6      76 .]      42     130 ..      37     130 .. 0.77

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 2.4e-06
                 EEETTEEEEEEE-TTCTTTTTCEEEEEETTEEEEEE...TS.CEEEEECE................BSS-BETTTEEEEEETTEEEEEEEB CS
          CS   6 yQtldeVvvtiyvkkvnikkkdvkvefkerslkvki...gk.eklliege................LfgpIdpeesswtieskkveitLkK 76 
                 ++ +d+V+v +++++v  kk+dv+v+  e +l+++    ++ +++ ++g+                  + +d +     +    + i+L K
  EPX71664.1  42 HEGKDTVEVDVELPGV--KKQDVQVHYDEGKLTISGesvNErKSESDKGNqrwserrfgsfsrtitIPNRVDADRIEAQFNHGILSIVLPK 130
                 67789**********9..*************999986665556666666588888888887777777777777777777777777777766 PP

>> PIH1_CS  PIH1 CS-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   3.6e-06     0.011      32      87 ..      47     121 ..      19     130 .. 0.87

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 3.6e-06
     PIH1_CS  32 elaieielPllksikevklrvgerrlel....................eskk.akyfLslkLpYpvdedkveAkFvk 87 
                 +  +++elP++   ++v+++++e +l +                    e ++  ++  ++++p +vd d++eA+F++
  EPX71664.1  47 TVEVDVELPGV-KKQDVQVHYDEGKLTIsgesvnerksesdkgnqrwsE-RRfGSFSRTITIPNRVDADRIEAQFNH 121
                 56799******.6799999999999999***************999744.336999999****************97 PP

>> Cohesin  Cohesin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   4.8e-05      0.14      14      57 ..      46      82 ..      39     131 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 4.8e-05
                SEEEEEEEEESECTTEEEEEEEEEE.TTTEEEEEEEE-TTS.SSG CS
     Cohesin 14 dtvtvpvtvsnvskkvaaaqftikYDpavlevvsvkaGsiv.kns 57
                dtv+v v++ +v+k    ++++++YD  +l+++    G+ v + +
  EPX71664.1 46 DTVEVDVELPGVKK----QDVQVHYDEGKLTIS----GESVnERK 82
                89************....***************....55443222 PP

>> FKBP26_C  FKBP26_C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0    0.0083        25      10      32 ..      51      73 ..      44      76 .. 0.86
   2 ?    5.1   0.0    0.0083        25      15      37 ..     109     131 ..     102     134 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0083
                HHH-TT--..--EEEEETTEEEE CS
    FKBP26_C 10 kryiPnidlekfkieiedktvtI 32
                 + +P ++++++++ ++++++tI
  EPX71664.1 51 DVELPGVKKQDVQVHYDEGKLTI 73
                4557*****************99 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.0083
                 T--..--EEEEETTEEEEE--TT CS
    FKBP26_C  15 nidlekfkieiedktvtIelpee 37 
                 ++d++ ++ +++ ++++I lp+ 
  EPX71664.1 109 RVDADRIEAQFNHGILSIVLPKI 131
                 69*******************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       395  (0.0220313); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.42
# Mc/sec: 1033.79
//
Query:       EPX71665.1  [L=520]
Description: vacuolar basic amino acid transporter 2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.1e-18   67.4  50.6    1.2e-09   37.6  43.5    3.9  2  MFS_1        Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.7   1.3   4.2e-12   7.5e-08       1      67 [.      80     144 ..      80     146 .. 0.94
   2 !   37.6  43.5   6.8e-14   1.2e-09     125     352 ..     141     422 ..     140     423 .. 0.84

  Alignments for each domain:
  == domain 1  score: 31.7 bits;  conditional E-value: 4.2e-12
       MFS_1   1 lllaaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlll 67 
                 lll +fl++++ ++++++++ +++e++  ++  +++++t y +++  +++++G++sd +Grr +ll+
  EPX71665.1  80 LLLNVFLAGFDGTVTASTYT-TIGEEFR-AVNLASWITTSYLITSTTFQPLYGSFSDILGRRACLLM 144
                 57899***************.*******.**********************************6664 PP

  == domain 2  score: 37.6 bits;  conditional E-value: 6.8e-14
       MFS_1 125 llsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpeepperkrkspkeee................................... 188
                 +l +++s+Gai+g+ +gg+l+++++Wr +f++  ++sll++ ++++++   +  +k  +   +                                    
  EPX71665.1 141 CLLMASSFGAICGASFGGILSELFNWRFCFLVQVPFSLLSISVGYFFVNNQRGVKKLHNFCGLFrkidilggfllvcgltalllvltfagtsftdnngi 239
                 67899***********************************8876666644444444444444449999*****************99999999999888 PP

       MFS_1 189 .....................kgtgpaplvpawkallkdpvlwillialllfffgfsglltllplylqevlglsglllaglllallalvgailallagr 266
                                        t  ap++p  k+l     +++l i+++++ ++ +++l++lpl++q vlg s    agl lal++l + i++l++g 
  EPX71665.1 240 slltlllitglillsafiyveFTTTAAPIIP-MKSLQGLYSILVLTIGFFTG-LAGYAYLFTLPLLFQLVLGDS-PSKAGLRLALPSLSTPIGGLICGI 335
                 8888888888888888887777777777777.66666555555344444444.57777*******99*******.8*********************** PP

       MFS_1 267 ls.drlgrrrrlllallllllaalglallavtssavllll.vlvliGfglgfvfpsllalasdlappeeagtasglfntagslggalg 352
                 l+ +r++    l+ ++ll++l++++ +l+ ++  ++lll  +l+ + +g+g+ fps+l   +  +p++ ++t ++   +++s+g+++g
  EPX71665.1 336 LMhQRVPIGELLFSGVLLMSLGYMLSLLVYPA-MPPLLLGlSLIPANVGQGIGFPSSLFSFVFAFPQDSHATSTSTLYLIRSIGSLFG 422
                 **99999999**************99999999.555555515555999*************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (520 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       895  (0.0499191); expected 358.6 (0.02)
Passed bias filter:                      512  (0.0285571); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.24s 00:00:00.85 Elapsed: 00:00:00.41
# Mc/sec: 3807.94
//
Query:       EPX71666.1  [L=93]
Description: hypothetical protein SOCG_01881 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.073   12.9   0.0        0.1   12.5   0.0    1.2  1  ACCA      Acetyl co-enzyme A carboxylase carboxyltransferase 


Domain annotation for each model (and alignments):
>> ACCA  Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   5.8e-06       0.1      30      75 ..       2      47 ..       1      53 [. 0.90

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 5.8e-06
        ACCA 30 seeieklekkleklkkeiyknltpwqkvqlaRhpeRpktldyieal 75
                +++i+k  k++++ k e y++ +p+q + +a  p R +++d+++ l
  EPX71666.1  2 TSNIQKYVKNCQRHKFENYQRYSPLQSIPVAETPFRHYSMDFVTGL 47
                5678999999999999**************************9866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       367  (0.0204696); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.27s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 646.38
//
Query:       EPX71667.1  [L=80]
Description: hypothetical protein SOCG_01882 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1551  (0.0865079); expected 358.6 (0.02)
Passed bias filter:                      522  (0.0291148); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.28s 00:00:00.69 Elapsed: 00:00:00.44
# Mc/sec: 552.25
//
Query:       EPX71668.1  [L=625]
Description: membrane transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.5e-40  136.9  51.3    7.5e-40  136.9  51.3    2.5  2  MFS_1     Major Facilitator Superfamily
      3e-20   72.2  19.8    3.9e-20   71.8  19.1    1.4  1  TRI12     Fungal trichothecene efflux pump (TRI12)
    7.6e-12   44.8  13.9    7.6e-12   44.8  13.9    2.8  3  Sugar_tr  Sugar (and other) transporter


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.9  51.3   1.3e-43   7.5e-40       1     352 [.     134     533 ..     134     534 .. 0.85
   2 ?   -0.1   0.1     0.058   3.5e+02     274     296 ..     583     605 ..     572     618 .. 0.64

  Alignments for each domain:
  == domain 1  score: 136.9 bits;  conditional E-value: 1.3e-43
       MFS_1   1 lllaaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalg.lllllfasslw.lllvlrvlqGl 97 
                 l+l++fl+al+ +i+++a+p +++++++ + s   ++ t+y+l + + ++ +G+ls+ +Gr  +l ++++lf lg +l +   s++  +l+++r++qG+
  EPX71668.1 134 LVLCLFLAALDNTIVTVAIP-TITQHFH-DTSHSFWISTAYTLSTNAVMPAIGVLSNILGRNHMLYASIFLFMLGsALSGG--SQSMiMLIISRAIQGV 228
                 579*****************.*******.777778****************************************555555..66666*********** PP

       MFS_1  98 gagalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpeepperkrkspkeee........ 188
                 g+g++ ++ +++i++++p + r+++++l s++++++ +lgp+lggl++++  Wr++f+i+ +v+ +a+ l++++l++ p++r+ + +  +         
  EPX71668.1 229 GGGGISSLTNIIISEITPLKTRPMYTALTSSAWGIALVLGPVLGGLICQNTTWRWIFFINLPVGGVAITLIVIFLRVLPVKRQSFLTFLKTfdflglts 327
                 *******************************************************************9988888888888888887777778******* PP

       MFS_1 189 ............................................kgtgpaplvpawkallkdpvlw......illialllfffgfsglltllplylqev 237
                                                               t++ p++p        pvl+      i++i++++  +  +++++++p y q v
  EPX71668.1 328 amtgvvlfllgislggesghwarpgvlpyiiiggiliifamvydFHTKRNPVLP--------PVLFknmngiIIMISSFILYMNDYLFSYHIPQYYQRV 418
                 *************99999999877777777777777777774443333333333........3332333445699999999999999************ PP

       MFS_1 238 lglsglllaglllallalvgailallagrlsdrlgrrrrlllallllllaalglallavtssavllllvlvliGf.glgfvfpsllalasdlappeeag 335
                 +g +  l++g+ +  +a+v ++++ ++g+l++ ++  ++ l +++++ +a lg ++   + s++   ++l++i + g+gf+f +ll +++ ++pp+ + 
  EPX71668.1 419 RGND-PLMSGVHFLPGAAVLIVSSAIIGALLKSFPFFKTVLSIGGIVCTAGLGSLISLDAFSPFSKPMGLITIFMfGSGFMFLPLLIVMQASFPPSLTP 516
                 ****.8****99*******************998884444444444444444444444444555555555555555*********************** PP

       MFS_1 336 tasglfntagslggalg 352
                  a++  ++++++gga+g
  EPX71668.1 517 IATATLMFVRYIGGAIG 533
                 ***************98 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.058
       MFS_1 274 rrrlllallllllaalglallav 296
                 ++++l++ +++++++l+++++  
  EPX71668.1 583 KTIWLFTTIAMAVGTLAIFFVKS 605
                 55666666666666666666554 PP

>> TRI12  Fungal trichothecene efflux pump (TRI12)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.8  19.1   6.5e-24   3.9e-20      64     329 ..     149     406 ..     133     478 .. 0.87

  Alignments for each domain:
  == domain 1  score: 71.8 bits;  conditional E-value: 6.5e-24
       TRI12  64 asalpnilqdvgqsensslfstlwttgqavsilvmgrltdrfgrrpfvilthilglvgaivgctatkfntllaamtllgvaagpaga.splfvgelmsn 161
                 + a+p i q   ++  s  +st +t+     +  +g l++ +gr  ++ ++  l ++g+ +   ++ +  l+ + ++ gv  g   + + +++ e+   
  EPX71668.1 149 TVAIPTITQHFHDTSHSFWISTAYTLSTNAVMPAIGVLSNILGRNHMLYASIFLFMLGSALSGGSQSMIMLIISRAIQGVGGGGISSlTNIIISEITPL 247
                 5799***********************99999**************************9999999999************9987766368999****** PP

       TRI12 162 ktk.flgllivsipvvvtsglspylgqrlaiqgswrwifyiyiitsaiavllivvwyyppsfaqlhgkkvrkreelakldwigiilvivgvslfllgvs 259
                 kt+ +   l+ s+  +++  l+p lg  ++ + +wrwif+i + +  +a++liv++      + l  k+ +    l   d++g+   ++gv lfllg+s
  EPX71668.1 248 KTRpMYTALTSSAWGIALV-LGPVLGGLICQNTTWRWIFFINLPVGGVAITLIVIFL-----RVLPVKRQSFLTFLKTFDFLGLTSAMTGVVLFLLGIS 340
                 **94567899999999999.***********************************85.....778899999999************************* PP

       TRI12 260 wggkpnspwnsakviglissglgslvvfalyevygkpvrpivppalfkdtrgfvcillissimgamnlsl 329
                  gg+    w    v+  i  g g l++fa+   +    +p++pp lfk+  g+  i++iss +  mn  l
  EPX71668.1 341 LGGES-GHWARPGVLPYIIIG-GILIIFAMVYDFHTKRNPVLPPVLFKNMNGI--IIMISSFILYMNDYL 406
                 ***96.57********99988.89*****9888888899*************7..567888877777554 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.8  13.9   1.3e-15   7.6e-12      66     190 ..     183     302 ..     160     307 .. 0.85
   2 ?   -1.1   4.6      0.11   6.4e+02      13      99 ..     390     511 ..     379     545 .. 0.67
   3 ?   -3.1   0.2      0.45   2.7e+03     410     438 ..     576     604 ..     568     613 .. 0.60

  Alignments for each domain:
  == domain 1  score: 44.8 bits;  conditional E-value: 1.3e-15
                 HHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTS CS
    Sugar_tr  66 agllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglglnkt 164
                 +g l++++GR   l ++++lf+ g++l++ ++   s+ +li++R + G+g G++s l+ + isEi+p k R + + l+ +a+ +  +++ ++g     +
  EPX71668.1 183 IGVLSNILGRNHMLYASIFLFMLGSALSGGSQ---SMIMLIISRAIQGVGGGGISSLTNIIISEITPLKTRPMYTALTSSAWGIALVLGPVLGGL--IC 276
                 699*****************************...*******************************************99987777777666655..56 PP

                 S-TTHHHHHHHCCHHHHHHHH.HHGGG CS
    Sugar_tr 165 snadgwrillglqlvpallll.illlf 190
                 +n ++wr+ ++++l    + + ++++f
  EPX71668.1 277 QN-TTWRWIFFINLPVGGVAItLIVIF 302
                 66.67*****99998765544033444 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.11
                 HHHHHCGGGTHHHHHHHHTSTT--SHHHHHH......................................HHHHHHHTHHHHHHHHHHHHHHHHHHTTHH CS
    Sugar_tr  13 gYdtgvigafltllkfaknfglsksksskee...................................ssvlsglivsiflvGaiiGslfagllgdrfGRk 76 
                 g  + + +++l+++++++ ++  ++++                                       + + +g iv+ + +G++i+   ++++++ +G  
  EPX71668.1 390 GIIIMISSFILYMNDYLFSYHIPQYYQRVRGndplmsgvhflpgaavlivssaiigallksfpffkTVLSIGGIVCTAGLGSLISLDAFSPFSKPMGLI 488
                 555666677777777777777777777555577888888888888888888888888888888887777788888888888888888888888888888 PP

                 HHHHHHHHHHHHHHHHHH-TTTT CS
    Sugar_tr  77 kslliaavlfvigavlqaaakgk 99 
                  ++++++ +++   ++ + a   
  EPX71668.1 489 TIFMFGSGFMFLPLLIVMQASFP 511
                 88888665555555554444433 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 0.45
                 HCHHHT-HHHHHHHHHHHHHHHHHHHHS- CS
    Sugar_tr 410 teaigggyvflvfaglavlfiifvfffvp 438
                 t   +++++ ++f+ +a+++ +   ffv 
  EPX71668.1 576 TTYASAYKTIWLFTTIAMAVGTLAIFFVK 604
                 44444566666666666666655555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (625 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1180  (0.0658152); expected 358.6 (0.02)
Passed bias filter:                      475  (0.0264934); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.71u 0.26s 00:00:00.97 Elapsed: 00:00:00.44
# Mc/sec: 4255.80
//
Query:       EPX71669.1  [L=138]
Description: hypothetical protein SOCG_01884 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       376  (0.0209716); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.32s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 858.06
//
Query:       EPX71670.1  [L=360]
Description: L-asparaginase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-50  171.8   2.8    1.5e-50  171.4   2.8    1.1  1  Asparaginase    Asparaginase, N-terminal
    8.3e-18   64.7   0.0    6.5e-17   61.8   0.0    2.2  2  Asparaginase_C  Glutaminase/Asparaginase C-terminal domain


Domain annotation for each model (and alignments):
>> Asparaginase  Asparaginase, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  171.4   2.8   1.6e-54   1.5e-50       1     188 [.      40     232 ..      40     235 .. 0.96

  Alignments for each domain:
  == domain 1  score: 171.4 bits;  conditional E-value: 1.6e-54
                   EEEEEEEESGGGEEECTTS--CCEE...S-HHHHHCCTTTCCCCSEEEEEEEEEE-GGG--HHHHHHHHHHHHHHC.CT.-SEEEEE--STTHHHHH CS
  Asparaginase   1 kvlvlatGGTiasekdesggalapa...lsaeellealpelekiaeleseqlanidSsnmtpadwlklaeaieeal.ee.ydgfVvlhGTDTlaytA 92 
                   +v + a+GGTia ++ ++ ++++++   + +++l+ea+p+++++ +++  q++++ S+n+tpa++l+l + + +++ ++ ++g+Vv+hGTD+l++tA
    EPX71670.1  40 NVTIFAMGGTIAGSAASNAETADYKagaVGIQTLVEAVPDIKNVSNVRGIQVTSVGSENLTPANVLNLTQLVINEVaKDdVHGIVVTHGTDSLEETA 136
                   599**********99999999999988999*****************************************999998556***************** PP

                   HHHHHHEES.SSEEEEE--SS-TTSTT-SHHHHHHHHHHHHHCGG.TTSECEEEETTEEEETTTEEE-BSSSSS-EEETTT--SEEEETTEEEESEE CS
  Asparaginase  93 saLslmlknldkpvvltGsqrplselrsDgpeNlldAllvaasse.riagvlvvfngkllranrvtKvhtssldaFespnlgplaevegskvkvnke 188
                   ++L+l++++ +kp+v++G++rp++++++Dgp+Nll+A++vaas++  ++g ++ +n+++ +a ++tK++ ++ld+F+s ++g l+ + +++ +++++
    EPX71670.1 137 MFLDLTVNT-TKPIVVVGAMRPSTAISADGPMNLLNAVAVAASDRsVGRGTMILLNDRIGSAFYTTKTNGNTLDTFKSYEAGFLGMIVDQRPHFYYS 232
                   *******99.**********************************99***************************************998998888776 PP

>> Asparaginase_C  Glutaminase/Asparaginase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.1     0.092   8.3e+02      12      60 ..     108     156 ..      84     181 .. 0.71
   2 !   61.8   0.0   7.3e-21   6.5e-17       1     114 []     252     356 ..     252     356 .. 0.97

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.092
                     -HHHHHHHHHTT--EEEEEEBTTTB--HHHHHHHHHHHTTT-EEEEEES CS
  Asparaginase_C  12 dtkvlkallkkgakGvvlegtGvGnlpsallealkeakargivvvatsq 60 
                     ++ v++++ k  + G+v+  +     ++a+   l + + + ivvv + +
      EPX71670.1 108 TQLVINEVAKDDVHGIVVTHGTDSLEETAMFLDLTVNTTKPIVVVGAMR 156
                     5567788888888888886655444444555555555566666665555 PP

  == domain 2  score: 61.8 bits;  conditional E-value: 7.3e-21
                     -EEEEE--TT--HHHHHHHHHTT--EEEEEEBTTTB--HHHHHHHHHHH.TTT-EEEEEESSSBS-----H.....HHHHHTEEE-TT--HHHHH CS
  Asparaginase_C   1 rVvvlklhpgmdtkvlkallkkgakGvvlegtGvGnlpsallealkeak.argivvvatsqcpsgsvsnseyeagkelerlgvisaddmtpeaar 94 
                     +V++l+ ++g+++ + ka++++gakG+vl+g+G+ ++++   +++  ++ ++ i+vv + ++++g  + s          +++i a+  +p++ar
      EPX71670.1 252 QVDILYGYQGLNPTLAKAAVNSGAKGLVLAGMGAASWTDPGNDVIDGLIrNQSIPVVYSHRTMDGFSDYS----------YNGIPAYFHNPQKAR 336
                     69*************************************99999999996789****************9..........69************* PP

                     HHHHHHCTT---HHHHHHHH CS
  Asparaginase_C  95 ikLmlllgkgldpaevrklf 114
                       Lml+++ g++ + + ++f
      EPX71670.1 337 YMLMLAINAGYSIQNITDMF 356
                     ****************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       387  (0.0215851); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.29s 00:00:00.79 Elapsed: 00:00:00.46
# Mc/sec: 2371.24
//
Query:       EPX71671.1  [L=349]
Description: NADP-dependent oxidoreductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      1e-20   74.0   0.0    1.5e-20   73.5   0.0    1.2  1  ADH_zinc_N      Zinc-binding dehydrogenase
    6.4e-18   64.6   0.1    1.4e-17   63.5   0.0    1.6  2  ADH_N_2         N-terminal domain of oxidoreductase
    2.3e-06   28.7   0.0    4.1e-06   27.9   0.0    1.4  1  ADH_zinc_N_2    Zinc-binding dehydrogenase
  ------ inclusion threshold ------
       0.11   12.5   0.3         12    5.9   0.1    2.4  2  Gly_rich_SFCGS  Glycine-rich SFCGS


Domain annotation for each model (and alignments):
>> ADH_zinc_N  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.5   0.0   3.3e-24   1.5e-20       1     121 [.     172     301 ..     172     310 .. 0.84

  Alignments for each domain:
  == domain 1  score: 73.5 bits;  conditional E-value: 3.3e-24
                 HHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTESEEEETTTCHHHHHHHHHTTTSSEEEEEESSCSHHHHHHHHHCEEEEEEEEECSC...TSSEEE CS
  ADH_zinc_N   1 gvGlaavqlAkalGaeviavdsseeklelakklGadevinykeadlverikeltggegvdvvfecvGsgatleaalkllkpgGrlvvvGg...gkgeee 96 
                 +vG+ + qlAk +G  v++ ++s+ek++ +k++G d+++nyk++++ e++ + + ++g+d++fe vG g+tl+a l  ++ + r+ ++G      +  +
  EPX71671.1 172 AVGQVVGQLAKSMGLYVVGSAGSDEKIAHLKEIGYDAAFNYKKESVHEALPRVC-PKGIDIYFENVG-GETLDAVLLNANFHARIIFCGCisdYNN--P 266
                 69***************************************6669*********.99**********.**********************863333..2 PP

                 .....EEHHHHHHTT-EEEEE-SSC.....HHHHH CS
  ADH_zinc_N  97 .....fdlrnlllkeksilGsllgs.....lreef 121
                       + +++l k++++ G+++ +     + e f
  EPX71671.1 267 npyslKNYSQILTKSIKVEGFIVMNlipfyKEEYF 301
                 466644444488************97777433333 PP

>> ADH_N_2  N-terminal domain of oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.5   0.0   3.2e-21   1.4e-17      31     104 ..      44     119 ..      21     123 .. 0.86
   2 ?   -3.5   0.1       2.1   9.5e+03      70      77 ..     172     179 ..     168     197 .. 0.55

  Alignments for each domain:
  == domain 1  score: 63.5 bits;  conditional E-value: 3.2e-21
     ADH_N_2  31 GevlvralylSvDPymRgrmn..daksyvepvelgdvmrggavgeVveSknpdfkvGdlVvgllgwqdyavsdgkg 104
                   +l+r+ y S+DPy+R r++  ++ksy++p+++g+v+   +++eVv+S  p+ k+G++V+ ++gw++y+++ ++ 
  EPX71671.1  44 HPLLLRNIYTSIDPYIRNRIRnpKRKSYIPPLKIGQVIPNLTLAEVVKSAVPEHKTGSHVIFMSGWEEYTLVPKQA 119
                 4589************999884459*********************************************997765 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 2.1
     ADH_N_2  70 avgeVveS 77 
                 avg+Vv  
  EPX71671.1 172 AVGQVVGQ 179
                 55555532 PP

>> ADH_zinc_N_2  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   0.0   9.2e-10   4.1e-06       2     130 ..     205     341 ..     204     343 .. 0.75

  Alignments for each domain:
  == domain 1  score: 27.9 bits;  conditional E-value: 9.2e-10
                   T-SEEEETTSTTHH...HHH-TT-EEEEEES-HHHHH.HHHHHHE..EEEEEEEE--.--........S-EEE-CHHHCTTT-EEEE--GGG...-. CS
  ADH_zinc_N_2   2 GAdevidyrtedfe...aatggegvDvvldtvggealleaslkvl..pggGrlvsig.gpp.......lsaallkpakkrkgrsvkyeflfsmkasa 85 
                   G d +++y++e+++     ++++g+D+ +++vgge+l +a+l  l  + ++r++  g   +        s +   + +  k+ +v    ++ + ++ 
    EPX71671.1 205 GYDAAFNYKKESVHealPRVCPKGIDIYFENVGGETL-DAVL--LnaNFHARIIFCGcI-SdynnpnpYSLKNYSQIL-TKSIKVEGFIVMNLIPFY 296
                   88999********999956679*************99.8887..443556999887733.235666553333333333.333333333333344457 PP

                   -HHHHHHHHHHHHHHH----EEEEEEGGGHHHHHHHHHSS--SSE CS
  ADH_zinc_N_2  86 qadileelaalieeGklrpvvdrvfpleeaaeAhrylesgrarGK 130
                   +++ ++e+ +li++G+l+   d   +le ++e + ++ +g+ +GK
    EPX71671.1 297 KEEYFREMPKLIADGRLKYKYDVYTGLESIPEGFLAVLQGKNFGK 341
                   8888******************7799******************9 PP

>> Gly_rich_SFCGS  Glycine-rich SFCGS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.1    0.0027        12      32      82 ..     167     220 ..     146     248 .. 0.79
   2 ?    4.3   0.0    0.0085        38      66      91 ..     313     338 ..     307     342 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0027
  Gly_rich_SFCGS  32 laadlklgdvmkkeeadlgisfcgsggagaltaqtk.ygykak..yglrsveeg 82 
                      aa   +g+v+ +    +g+   gs g+   +a+ k  gy+a   y+  sv+e 
      EPX71671.1 167 SAASGAVGQVVGQLAKSMGLYVVGSAGSDEKIAHLKeIGYDAAfnYKKESVHEA 220
                     4667789********************998887765379987611455577665 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.0085
  Gly_rich_SFCGS  66 tkygykakyglrsveegvtaikegkk 91 
                      ky y++  gl s+ eg  a+ +gk+
      EPX71671.1 313 LKYKYDVYTGLESIPEGFLAVLQGKN 338
                     69*******************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (349 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       298  (0.0166211); expected 358.6 (0.02)
Passed bias filter:                      280  (0.0156172); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.28s 00:00:00.78 Elapsed: 00:00:00.46
# Mc/sec: 2269.08
//
Query:       EPX71672.1  [L=389]
Description: agmatinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.1e-88  295.2   0.0    6.5e-88  294.9   0.0    1.0  1  Arginase  Arginase family
  ------ inclusion threshold ------
      0.075   13.3   0.0       0.12   12.6   0.0    1.3  1  UPF0489   UPF0489 domain


Domain annotation for each model (and alignments):
>> Arginase  Arginase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  294.9   0.0   7.2e-92   6.5e-88       2     279 ..      74     373 ..      73     374 .. 0.93

  Alignments for each domain:
  == domain 1  score: 294.9 bits;  conditional E-value: 7.2e-92
                 EEEEEEEE--TTTSSSGGGGGHHHHHHHHHHTSBTHCHEETTTTE...SCCSEEEEEEEEE--SSCHHHHHHHHHHHHHHHHHT............... CS
    Arginase   2 dvallGvPfdaagsgrpGarfGPraireasarleealeynlelgv...leelkivdlgdvavtpvdneevleqieeavaeilka............... 82 
                 d+a++G+Pfd+++s+rpGarfGP+ ire+s+rl+ + +yn+  ++    +++kivd+gd+++t +dn+ +++qie+   e+l++               
  EPX71672.1  74 DIAFIGAPFDTGTSYRPGARFGPSGIREGSRRLNLYGGYNVPMETnpfNNWAKIVDCGDIPLTSYDNAVSIKQIESGHFELLTRkpssyserdgyaldg 172
                 89********************************8778888888788999*****************999**************666666666666665 PP

                 ..TCEEEEEESSGGGHHHHHHHHHHHHSTTEEEEEESSS----SSC......TTTBSSSTTSHHHHHHHHTSECGCEEEEEEE-STCSH..HHHHHHHT CS
    Arginase  83 ..gklpivlGGDHsialgilralaekygkplgvihfDAHaDlrtpe......tegsgnshGtpfrraaeegllkpkklvqiGirsvdne..eyelakel 171
                     ++i+lGGDH++ l+ilr+++++yg p+++ihfD+H+D ++p+      ++  +++hGt+f++a++egl+++++ ++ Gir++ ++  +y++++++
  EPX71672.1 173 svLPRVITLGGDHTVVLPILRSVSRAYG-PISIIHFDSHLDSWKPKvfgggkSSVGSINHGTYFYHASQEGLISNNSNIHGGIRTTLSGlsDYDDDADC 270
                 555555********************99.6****************99998877778*********************************99999999* PP

                 TSEEEEHHHHHHHHHHHHHHHHHHHHTCTTSEEEEEEEGGGBBTTTSTSSSS-BSS-B-HHHHHHHHHHHHCHSEEEEEEEE-B-GGGSSTTTHHHHHH CS
    Arginase 172 girvitmreidelglkavveeilervgaeedpvylSfDiDvlDpavaPGtGtpepgGltlrellallrelaeklnlvgaDvvEvnPaldteaeqtarla 270
                 g+++i++reid +g++a++++i++rvg  ++  ylS+DiDvlDpa+aP+tGtpe  G+t+rel+++lr+l +  +lvgaDvvEv+Pa+d  ae t+++a
  EPX71672.1 271 GFEIIEAREIDTIGMDAIIKKIRDRVG--DGIAYLSIDIDVLDPAYAPATGTPESAGWTTRELRTILRGLDG-IKLVGADVVEVAPAYDF-AEVTTLAA 365
                 **************************8..57***************************************99.*****************.67****** PP

                 HHHHHHHHH CS
    Arginase 271 arlvrelll 279
                  ++++e+ +
  EPX71672.1 366 SDILFEI-M 373
                 *****96.4 PP

>> UPF0489  UPF0489 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   1.4e-05      0.12       7      43 ..     185     223 ..     182     267 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.4e-05
     UPF0489   7 HheaLeaiyraigskklpsdlslvHlDaHpDllipk.....k 43 
                 H  ++  i r +++ +   ++s++H+D+H D   pk     k
  EPX71672.1 185 H-TVVLPILRSVSRAY--GPISIIHFDSHLDSWKPKvfgggK 223
                 4.44445667777777..9************87776555540 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (389 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       281  (0.0156729); expected 358.6 (0.02)
Passed bias filter:                      273  (0.0152267); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2829.43
//
Query:       EPX71673.1  [L=515]
Description: hypothetical protein SOCG_01888 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.3e-51  173.8  56.3    6.5e-51  173.5  56.3    1.0  1  AA_permease_2  Amino acid permease
    2.2e-23   82.6  49.0    3.1e-23   82.1  49.0    1.1  1  AA_permease    Amino acid permease


Domain annotation for each model (and alignments):
>> AA_permease_2  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  173.5  56.3   7.2e-55   6.5e-51       1     425 []      46     489 ..      46     489 .. 0.81

  Alignments for each domain:
  == domain 1  score: 173.5 bits;  conditional E-value: 7.2e-55
  AA_permease_2   1 lsllsafalvigsv.....igsgifvknlaasggpalilwvwiavligslavllvyaElssalprsgGiyvytkaafgkkva....flsawfnwfa 87 
                    +s+ls f+ ++gs+     i+   +++  ++ gg   +++++i++l++ ++v + + El+s +p+sgG+y ++ ++ ++       + +++ ++++
     EPX71673.1  46 FSYLSIFGQSFGSMglcpaISGSLIFS--MNCGGGGMVWSWIIGCLCL-VPVTISLGELASSMPTSGGLYFWVFKLAPPAQRlflcWACGYVSVLG 138
                    799***********8888633333445..8899998899999999998.8*********888************9995433344579999999999 PP

  AA_permease_2  88 yvpvlasilsvaasyl...lnalgpdlqgntwltyliaiaililvalinirgikesakiqnilgilkillpliiliilglitvdgggfssl..... 175
                    y+   as++++  s++   + + +p +  +++ +y+i++a+l+++ +  ++  + +ak++ + +++ +  + +i+i l+l+++++ +  ++     
     EPX71673.1 139 YATIYASTIYSTSSMIqalAMINNPLYSSTKYEQYGIYVALLLVTSATAVIPSRVIAKLNIFNITFQL-SLSVIFI-LALAFGSNPTTRNPgnyif 232
                    9998888776666666320444468888899*****************************99999999.4555555.5666665554443334443 PP

  AA_permease_2 176 .stetdtffpn.gwpgvllgllivlwsfdGfesaanvseevkk..kdvpkaifigllivlvlyllvniaflg..vvpddeianlsnlgs.vaalff 264
                      +++ + ++n gw  ++l++++ +w+++Gfes+a+++ee  +  k +p+a++++++++++l++ + i++++  + + ++++ +s lg+ va++++
     EPX71673.1 233 gDFKNYSGWSNtGWA-FMLSFTTPVWVVSGFESSAVIAEESTNaaKAAPFAMVSSVIVAAILGWCIIITIVAtmGNNFKGVSGSS-LGQpVAQVLL 326
                    322222233331443.4678999*****************8887789****************9977665550055557776644.555369**** PP

  AA_permease_2 265 eavggkvvaiivvilialsllgaintavigssrvlealardgvlP..rffakvnkfgspiraiiltaivslillllfllassaaynfllsvsslgl 358
                    +++g k +++i++ l++++l ++  ++vi+ssr ++a++rdg++P  +ff++  k++ p++ai l++++s i + l++l++++a++ +++++ ++l
     EPX71673.1 327 NNLGTKGAKGIFS-LLVIALYLNSVSLVIASSREVFAFCRDGGIPgsKFFKHLTKQKVPLNAILLVFLYS-ISVGLLILVNASAISSVFNLAIIAL 420
                    ****888888888.9999****************************************************.6666666778*************** PP

  AA_permease_2 359 iisyllliigalilrkkrphl...krpgkilvaiigalfllfllvalffppkgpatqssliytiiltval 425
                    +i y  ++++++i +  +p     +++   l+a  ++l+  f++++l fp  +   q  ++++i++++++
     EPX71673.1 421 YIAYSCPLLCRFICKNFEPGIfyaGKW-SKLLASWSLLWMWFMIIMLLFPEYQNPSQAQMNWAIVVLGFV 489
                    ************999887855454555.5668888*****************************999875 PP

>> AA_permease  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.1  49.0   3.5e-27   3.1e-23      19     464 ..      68     499 ..      52     509 .. 0.78

  Alignments for each domain:
  == domain 1  score: 82.1 bits;  conditional E-value: 3.5e-27
  AA_permease  19 lgvvlsqaGplgallayllagvviflvmlslgeiatngpksggfytyasrflgpe....lGfviGlnylfswitvlaleltaasiliqfwelvtdlpk 112
                  + +   ++G++g++ ++++++++++ v++slge+a+ +p sgg y+++ +   p+    l +++G+  ++ ++t +a  +   s++iq + +   +p 
   EPX71673.1  68 SLIFSMNCGGGGMVWSWIIGCLCLVPVTISLGELASSMPTSGGLYFWVFKLAPPAqrlfLCWACGYVSVLGYATIYASTIYSTSSMIQALAM-INNPL 164
                  4455568999999***********************************99998863333666666667777788888888888888888844.34442 PP

  AA_permease 113 awvt......gavflvvl.liinlvgvkvygeaefilalikiiaiiafiivgiillaggkpnkgagfrflgdngsifknnlppgfakeeegaf..knf 201
                     t      + v l+++ ++  ++  +v ++  ++ + + +   ++fi+ +++++    +n+g               +++++f+++++ +    +f
   EPX71673.1 165 YSSTkyeqygIYVALLLVtSATAVIPSRVIAKLNIFNITFQLSLSVIFILALAFGSNPTTRNPG----------N----YIFGDFKNYSGWSNtgWAF 248
                  3333789887444444441466778889999988888888888888888888544444444444..........2....3333333333333300467 PP

  AA_permease 202 isvfvivvfaftGielvaiiagEvkdPeksiPkailqvviritifYvlsllligllvprndlgllndsasaaspfvifikesgvsvlaplinavilta 299
                  +  f + v   +G+e+ a+ia+E+ + +k+ P a+ + vi  +i+  +++++i+++++ n +g+  +s+   +   + ++++g ++++ ++ +++++ 
   EPX71673.1 249 MLSFTTPVWVVSGFESSAVIAEESTNAAKAAPFAMVSSVIVAAILGWCIIITIVATMGNNFKGVSGSSLGQ-PVAQVLLNNLGTKGAKGIFSLLVIAL 345
                  777888888999*****************************************************999966.899999*************9998766 PP

  AA_permease 300 alssansslysasRvlyslakdglaP..kvlkkvskrgvPlraillsmiisllalllaslnlaapivfnfllaisaliglivwlliilsyl.rfRkal 394
                   l+ ++s+++++sR ++++++dg +P  k++k ++k++vPl+aill+++ s  + ll  +n++ +i + f lai al++    +l +  +  +f + +
   EPX71673.1 346 YLN-SVSLVIASSREVFAFCRDGGIPgsKFFKHLTKQKVPLNAILLVFLYSISVGLLILVNAS-AISSVFNLAIIALYIAYSCPLLCRFICkNFEPGI 441
                  666.579******************************************99988888888888.56667778888887776666666555569***** PP

  AA_permease 395 kyqgrsieelgfkaallplgvilvlaaliiillilalyayltvkkgpkdwgaasfaaaylivllfliilv 464
                  +y g++         ll  ++ l++ ++ii+ll+  +  + +     +++++a +++ ++++++++ +++
   EPX71673.1 442 FYAGKWS-------KLLASWSLLWMWFMIIMLLFPEYQNPSQ-----AQMNWAIVVLGFVMLFCIVYYYI 499
                  *****98.......6667788888888888888888887777.....67777777777777777766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (515 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1072  (0.0597914); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.26s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 3538.17
//
Query:       EPX71674.1  [L=635]
Description: transcription factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.6e-24   85.2  10.6    7.8e-24   84.1  10.6    1.6  1  Fungal_trans  Fungal specific transcription factor domain
    3.2e-07   30.3  13.0    3.2e-07   30.3  13.0    2.0  2  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain
  ------ inclusion threshold ------
      0.071   13.9   1.6       0.19   12.5   0.2    2.3  2  Cadherin_C_2  Cadherin cytoplasmic C-terminal


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.1  10.6   1.3e-27   7.8e-24       2     238 ..     202     433 ..     201     499 .. 0.81

  Alignments for each domain:
  == domain 1  score: 84.1 bits;  conditional E-value: 1.3e-27
  Fungal_trans   2 drffsnfhpqfpilhkpsflpktssenssksayasplll..lailalGalfsesetkesnssltsesqefiafplraeilihedfsspssslwilqs 96 
                    ++f++++ ++p +  ++f+++++s        +++ l+  ++ilal +  ++ +++++ s++  +         ++   ++ df+ +++ +  +q+
    EPX71674.1 202 TSYFQHVNWWWPTFILDDFMYEFESFYLYGFHTNNAWLIsfYSILALSCIRKRLNSSKKLSEAFFST--------AWVYAQNFDFFLSPQ-IDKVQA 289
                   6899999999999999999999944444445555555554477777777666666665544444333........666666555666666.****** PP

  Fungal_trans  97 LlllelyektssdralherhhgvavrlarslgLhrnpsyvgkkslwklweeeaesrrRlwwaaFylDktialklGrppllddsqinlpLPcddddlw 193
                   L  +  y   +sd +l+  ++g a+ +a++l Lh++ps++       ++e  +es +R++w++++lDk i+l++G p+ ++d++in++LP++  +  
    EPX71674.1 290 LIVMTQYAAYLSDSSLCRALCGQACLMAQQLNLHKKPSDSL------KPEI-KESYKRIFWMCYILDKNISLVFGTPSAFHDNDINCELPDSKFEHL 379
                   ***************************************99......8888.**************************88**********9998888 PP

  Fungal_trans 194 esddaseetlvetk.........lsneeksrkiasfllaLkkilskiagsllsi 238
                   +  ++ +                +  +  s+k ++++ a  k++s i+ +l+  
    EPX71674.1 380 FGVHKGGDSIFIPTvsltiiqseIRTRLYSVKSPKQMAAREKFVSPIHQKLIQW 433
                   888888777776557799999999999999999999999999999977666544 PP

>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.3  13.0   5.4e-11   3.2e-07       1      39 [.       5      42 ..       5      43 .. 0.95
   2 ?   -2.8   0.3       1.2   7.1e+03       2       7 ..      92      97 ..      90      98 .. 0.75

  Alignments for each domain:
  == domain 1  score: 30.3 bits;  conditional E-value: 5.4e-11
                SS-HHHHHCT---STSSSS-HHHHHCTHHHCCCCTCCCE CS
     Zn_clus  1 haCdnCrkkKvKCdakkPaCsnCkklnleCtfysesskr 39
                +aCd Cr kK+KC++ +P C+ C   ++eC  ys++s+r
  EPX71674.1  5 KACDLCRLKKIKCSRAQPRCQTCTLFQSECH-YSNRSRR 42
                59*****************************.9999887 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.2
                S-HHHH CS
     Zn_clus  2 aCdnCr 7 
                +C++C 
  EPX71674.1 92 SCKTCT 97
                788885 PP

>> Cadherin_C_2  Cadherin cytoplasmic C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1      0.75   4.5e+03      22      39 ..     243     260 ..     238     308 .. 0.36
   2 ?   12.5   0.2   3.2e-05      0.19       5      40 ..     465     500 ..     464     522 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.75
  Cadherin_C_2  22 ivlvavrlrkerksaalq 39 
                     ++a+ + ++r +++ +
    EPX71674.1 243 YSILALSCIRKRLNSSKK 260
                   333333332222222222 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 3.2e-05
  Cadherin_C_2   5 YLviaLasvSflFLltvivlvavrlrkerksaalqk 40 
                   YL+ a+  vSf +L t+ivl   + +ke+++  +++
    EPX71674.1 465 YLTFAVMEVSFSYLNTIIVLHSSCSQKENQQLCIKA 500
                   9*******************8888888777766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (635 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       845  (0.0471303); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.63u 0.27s 00:00:00.90 Elapsed: 00:00:00.49
# Mc/sec: 3876.34
//
Query:       EPX71675.1  [L=459]
Description: MatE family transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-62  209.3  25.2    3.2e-35  121.2   6.0    2.2  2  MatE      MatE


Domain annotation for each model (and alignments):
>> MatE  MatE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.2   6.0   1.8e-39   3.2e-35       1     161 []      17     177 ..      17     177 .. 1.00
   2 !   93.9  11.2   4.3e-31   7.7e-27       4     159 ..     240     396 ..     239     397 .. 0.98

  Alignments for each domain:
  == domain 1  score: 121.2 bits;  conditional E-value: 1.8e-39
        MatE   1 PialenllesllslidtllvgrlgskalAavsialsilsllfv.fllglstalttlvgqalGaknfkrakealrqglilllllsliiallvllfseqil 98 
                 P++l ++l+++l+  +++++grlg+++l+++++a ++++ +++ ++lg  ta +t+ ++ +Ga+++++++  +++++i+l +l+l+++l+ ++fs++il
  EPX71675.1  17 PVILGYALQNSLQSCSVIITGRLGANELSVAAFAYMFAMSTGWlIALGGTTAFDTFGSNLWGAGKKHELGILFQTAIIILSFLYLPVCLV-WWFSKPIL 114
                 99****************************************************************************************.******** PP

        MatE  99 slftqdeevlelakrylrililgipalalqlvlsgilrgagktkvplyislislllniplnyl 161
                  +++q++e++e+++++lr+li+g ++++++++l+++l+++++t+++ y++l++++lni lny+
  EPX71675.1 115 IFLHQTPELAEASQNFLRYLIPGGLGYICFELLKKYLQTQEITRAGSYVLLVTSPLNIALNYI 177
                 **************************************************************7 PP

  == domain 2  score: 93.9 bits;  conditional E-value: 4.3e-31
        MatE   4 lenllesllslidtllvgrlgskalAavsialsilsllfvfllglstalttlvgqalGaknfkrakealrqglilllllsliiallvllfseqilslft 102
                 +++ +e++ + i+ l++g+lg++ lAa si +++ +ll ++++gl++ ++ +++++lGa+ ++ a+ ++ ++ ++++ l+ +i+++++++++ + +lft
  EPX71675.1 240 IMVGTEWWAFEIVALMAGKLGAVPLAAQSIIMTTDQLLNTIPFGLGIITSNRIAYYLGAGLPNSASSVAEVAAVVGATLGTVIMIIMIALRQVFGKLFT 338
                 667789********************************************************************************************* PP

        MatE 103 qdeevlelakrylrililgipalalqlvlsgilrgagktkvplyislisl.llnipln 159
                  d++v++l++  l++++++++ ++l+ +  g+lrg+++++v+++++++++ l+ +pl+
  EPX71675.1 339 EDPDVINLVAIVLPLVAIFQISDSLNGTMGGALRGTKRQEVGAMVNISAYyLFSLPLG 396
                 *****************************************************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (459 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       560  (0.0312343); expected 358.6 (0.02)
Passed bias filter:                      242  (0.0134977); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 3331.33
//
Query:       EPX71676.1  [L=508]
Description: glycerophosphodiester transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.7e-21   75.5  31.3    8.3e-16   57.9  12.5    2.1  2  Sugar_tr  Sugar (and other) transporter
      1e-20   74.0  38.8    5.6e-12   45.3  19.4    2.1  2  MFS_1     Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.9  12.5   9.3e-20   8.3e-16       9     197 ..      80     273 ..      71     277 .. 0.81
   2 !   25.1  10.6   8.3e-10   7.4e-06     224     445 ..     267     481 ..     264     486 .. 0.80

  Alignments for each domain:
  == domain 1  score: 57.9 bits;  conditional E-value: 9.3e-20
                 HHHHHHHHHCGGGTHHHHHHHHTSTT--SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTT.....SS- CS
    Sugar_tr   9 gllfgYdtgvigafltllkfaknfglsksksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgk.....nsv 102
                  l  gY +  iga++t+lk ++    +++++        +  i  + ++G i+G+l++g ++d +GRk ++++a+ +++++++l+  a g      +++
  EPX71676.1  80 LLSDGYCLSSIGAVITILKSLYPRESKSHQN--------IEHISMSSYIGTIMGQLLFGVFSDAVGRKTGMVTATGILIVATALCSGAYGLhgsinSMF 170
                 3555666667777777777554444444443........456888889*************************999998888888888877899999** PP

                 TGGGGGHHHHHHHHHHHHHHHHHHHHTTS...-SCCH.HHHHHHHHHHHHHHHHHHHHHHHHH.HTSS-...TTHHHHHHHCCHHHHHHHHHHGGGS-- CS
    Sugar_tr 103 evlivgRvlvGigvGlasvlvPmyisEiA...pkklR.galvslyqlaitfGilvaaifglgl.nktsn...adgwrillglqlvpallllilllflPE 193
                 ++li+ R+++GigvG++ v+ ++ +sE +      +R +++v ++++a+++G +++a + ++l   +++   +  wr+ +g+ +++++++lil+l + E
  EPX71676.1 171 QALIAYRFFLGIGVGAEFVCGSIAASESSneiRSGIRhSIFVIVTDTATVVGHILGALVPYILvVIFGEnhlRIVWRLSIGFGVILPIVFLILRLRMVE 269
                 *****************************6555677777899999**************9999544444799999************999999987766 PP

                 -HHH CS
    Sugar_tr 194 SPry 197
                  + y
  EPX71676.1 270 VKAY 273
                 6555 PP

  == domain 2  score: 25.1 bits;  conditional E-value: 8.3e-10
                 HHHHHHHHHHHHH.....HTTHHHHSH...HHHHHHHHHHHHHHTTHHHHHHHTTTHHHHSS-THH.....HHHHHHHHHHHHHHHHHHHHHHHHS-SH CS
    Sugar_tr 224 laeekdsleaeqeeekaswkellssktvrqrlligvvlqifqqltGinaimyysptifenlglsks.....llvtiivgvvnfvatfvaiflvdrfGRR 317
                 ++e k+   +  +++k+ w+ + +  +   rll++  ++++  l  + a+  ys++i + l  ++      + +t+++       ++ +++++d +G +
  EPX71676.1 267 MVEVKAYVSHRISMRKVPWRLVTKLYG--PRLLLISIIWFANDLI-VCAFSLYSSSIVKGLLPEDAsmaktFGWTVLIQSFSLPGSLLGAYFSDVLGPK 362
                 556666666677777899999999966..6666666666666665.589999******99988888866668888888888888889999********* PP

                 HHHHHHHHHHHHHHHHHH..HHHHTTSS...CHHHHHHHHHHHHHHHTTTTHHHHHHHHHHSHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHT- CS
    Sugar_tr 318 tllllGaagmaicfvilgivalllvakskaasivaivfialfialfalgwgpvpwvlvsElfpqsvRskalaiavavnwlanflisllfpiiteaiggg 416
                 ++l++G++ +  + +++++ ++ l ++      ++ v++ lf+ + ++g+ + + +l++ ++p+ +R++ + ia++v+    ++   ++ +  ++ +  
  EPX71676.1 363 RCLIVGMILQGTVGLFMSGFFHQLIHR----IACFCVLYGLFLSFSEFGVLSNLGLLAAKTSPTPIRGLYYGIAATVSRCGAIA--GIYVFGGNQFQ-- 453
                 *****************9677777777....6999*****************************************99876544..34444455555.. PP

                 HHHHHHHHHHHHHHHHHHHHS--STT--C CS
    Sugar_tr 417 yvflvfaglavlfiifvfffvpetkgrtl 445
                   +++ a+  ++fi f  ff+p+   +  
  EPX71676.1 454 -KYFYVASGIYFFIAFLSFFLPHVNQSCV 481
                 .5556666678999999999999876655 PP

>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.3  19.4   6.2e-16   5.6e-12      30     241 ..     107     338 ..      78     345 .. 0.70
   2 !   32.0  16.5   6.7e-12     6e-08      32     178 ..     333     477 ..     308     504 .. 0.76

  Alignments for each domain:
  == domain 1  score: 45.3 bits;  conditional E-value: 6.2e-16
       MFS_1  30 spseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalg.lllll.fa.....sslw.lllvlrvlqGlgagalfpagaaliadwfpkeerg 120
                 s++ i  +    ++g++ ++l++G++sd +Gr+  ++++  +++++ +l+   ++     +s++ +l++ r++ G+g ga f  g +++++ +++ + g
  EPX71676.1 107 SHQNIEHISMSSYIGTIMGQLLFGVFSDAVGRKTGMVTATGILIVAtALCSGaYGlhgsiNSMFqALIAYRFFLGIGVGAEFVCGSIAASESSNEIRSG 205
                 4555666778899*********************8888888888883444446424456788888******************************7777 PP

       MFS_1 121 raigllsa....gfslGailgpllggllasslg.......Wravfyilaivsllafvlfllllpeepperkrkspkeeekgtgpaplvpawkallkdpv 208
                    +++ +    ++ +G ilg+l+  +l+  +g       Wr++  +  i+ +++    l+l ++    ++ +s++       + p++   ++l  ++ 
  EPX71676.1 206 IRHSIFVIvtdtATVVGHILGALVPYILVVIFGenhlrivWRLSIGFGVILPIVF----LILRLRMVEVKAYVSHRIS---MRKVPWRL-VTKLYGPR- 295
                 77666666555599999999999999**********6666666644444444444....4666666666666666666...37889999.99999999. PP

       MFS_1 209 lwillialllfffgfsglltllply..............lqevlgls 241
                    ll++++++f ++ +++  + ly              + +++g++
  EPX71676.1 296 ---LLLISIIWF-ANDLIVCAFSLYsssivkgllpedasMAKTFGWT 338
                 ...444444443.3333222222222222333333333356666666 PP

  == domain 2  score: 32.0 bits;  conditional E-value: 6.7e-12
       MFS_1  32 seigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllll..fa...sslw.lllvlrvlqGlgagalfpagaaliadwfpkeergraig 124
                  ++g+ + + ++ ++ +sl+++++sd +G++r+l++g++l +  +l+++  f+   + +  + ++  ++ ++ + +++++ + l+a+ +p + rg+++g
  EPX71676.1 333 KTFGWTVLIQSF-SLPGSLLGAYFSDVLGPKRCLIVGMILQGTVGLFMSgfFHqliHRIAcFCVLYGLFLSFSEFGVLSNLGLLAAKTSPTPIRGLYYG 430
                 347888888775.99*****************************77777844356799**999999********************************* PP

       MFS_1 125 llsagfslGailg.pllggllasslgWravfyilaivsllafvlfllllpeeppe 178
                 ++++ + +Gai g +++gg       ++  fy++ +++++ +    l ++ ++++
  EPX71676.1 431 IAATVSRCGAIAGiYVFGGNQ-----FQKYFYVASGIYFFIAF---LSFFLPHVN 477
                 *************55555533.....56667777777777655...344444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (508 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       680  (0.0379274); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.31s 00:00:00.92 Elapsed: 00:00:00.49
# Mc/sec: 3115.61
//
Query:       EPX71677.1  [L=421]
Description: glycerophosphodiester transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.9e-16   58.4  14.5    5.9e-16   58.4  14.5    2.8  2  Sugar_tr  Sugar (and other) transporter
    3.2e-09   36.2  27.4    3.2e-09   36.2  27.4    2.0  2  MFS_1     Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.4  14.5   6.6e-20   5.9e-16       6     197 ..      36     235 ..      32     241 .. 0.85
   2 !    4.6   6.7    0.0013        12     224     335 ..     229     342 ..     226     385 .. 0.67

  Alignments for each domain:
  == domain 1  score: 58.4 bits;  conditional E-value: 6.6e-20
                 HHHHHHHHHHHHCGGGTHHHHHHHHTSTT--SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTT..... CS
    Sugar_tr   6 alggllfgYdtgvigafltllkfaknfglsksksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgk..... 99 
                 a++g+    d + ++++ t+l  +k+ + ++ k+ + +    +  i  i++vG i+G+l++g ++d +GRk +++++++++v++++l+  a g+     
  EPX71677.1  36 AVCGTALLSDGYCMSSIGTVLTILKKLYPKEIKA-HHT----IKKISMIAYVGTIVGQLLFGVFSDALGRKAGMVASSAFLVVATALCTGAYGYhgsis 129
                 6677777777777777777777666665555554.333....677999*******************************************999999*9 PP

                 SS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS...-SCCHHHH.HHHHHHHHHHHHHHHHHHHHHHHTSS-....TTHHHHHHHCCHHHHHHHHHHGGG CS
    Sugar_tr 100 nsvevlivgRvlvGigvGlasvlvPmyisEiA...pkklRgal.vslyqlaitfGilvaaifglglnktsn....adgwrillglqlvpallllilllf 190
                  ++++li+ R+++Gig+G++ v+ ++ +sE +      lR al v ++++a+ +G +++a + ++ + + +    +  wr+ +g  +v+++++lil++ 
  EPX71677.1 130 GMMQALIAYRFFLGIGIGAEFVCGSISASESSteiRSGLRHALfVIVTDTATCIGHILGALIPYIWACIFGdkhlRIVWRLSIGCGIVIPIFFLILRIR 228
                 99*****************************9555556775552778999****************777777999999*****************9988 PP

                 S---HHH CS
    Sugar_tr 191 lPESPry 197
                 + E + y
  EPX71677.1 229 MKEIKTY 235
                 8776666 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.0013
                 HHHHHHHHHHHHH.....HTTHHHHSH...HHHHHHHHHHHHHHTTHHHHHHHTTTHHHHSS-THH......HHHHHHHHHHHHHHHHHHHHHHHHS-S CS
    Sugar_tr 224 laeekdsleaeqeeekaswkellssktvrqrlligvvlqifqqltGinaimyysptifenlglsks......llvtiivgvvnfvatfvaiflvdrfGR 316
                 ++e+k+   + ++ + + w   +++ +   rl++  +++ f +   i a+  ys+ti++ + l k+      + +t+++       ++++++++d +G 
  EPX71677.1 229 MKEIKTYVSHRVSVRRIPWILAIRMYG--IRLVLLSMIW-FANGLIISAFSLYSSTIIKGVILPKDasmariFGWTVLTQSFSLPGSLMGAYFSDVIGP 324
                 677777777777777888888889966..5676666665.5567779*******************8877777778888888888888999*******9 PP

                 HHHHHHH.HHHHHHHHHHHH CS
    Sugar_tr 317 RtllllG.aagmaicfvilg 335
                 +  ll + ++  ai  ++ g
  EPX71677.1 325 K--LLASkTSPTAIRGLYCG 342
                 9..44442333333333333 PP

>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.2  27.4   3.5e-13   3.2e-09      37     272 ..      76     323 ..      40     328 .. 0.75
   2 !    3.3   3.9    0.0034        31     110     171 ..     328     384 ..     322     393 .. 0.75

  Alignments for each domain:
  == domain 1  score: 36.2 bits;  conditional E-value: 3.5e-13
       MFS_1  37 lltlyalgaavaslplGrlsdrfGrrrvlllglllfalg.lllll.fa.....sslw.lllvlrvlqGlgagalfpagaaliadwfpkeergraiglls 127
                 +  + ++g++v++l++G++sd +Gr+  ++++ ++++++ +l+   ++     s++  +l++ r++ G+g ga f  g + +++ +++ + g+  +l+ 
  EPX71677.1  76 ISMIAYVGTIVGQLLFGVFSDALGRKAGMVASSAFLVVAtALCTGaYGyhgsiSGMMqALIAYRFFLGIGIGAEFVCGSISASESSTEIRSGLRHALFV 174
                 6678999********************99999999999955555564344456777778*****************************87777777777 PP

       MFS_1 128 a....gfslGailgpllggllasslg.......Wravfyilaivsllafvlfllllpeepperkrkspkeeekgtgpaplvpawkallkdpvlwillia 215
                 +    ++ +G ilg+l+  + a  +g       Wr++ + ++iv  ++f+   +l  + +  +  +s++     + + p++ a+++   + vl  l ++
  EPX71677.1 175 IvtdtATCIGHILGALIPYIWACIFGdkhlrivWRLS-IGCGIVIPIFFL---ILRIRMKEIKTYVSHRVS---VRRIPWILAIRMYGIRLVL--LSMI 264
                 64444777777888777777777777***88888876.666666666666...888888888888888888...6999999999999999999..9999 PP

       MFS_1 216 lllfffgfsglltllply...........lqevlglsglllaglllallalvgailallagrlsdrlg 272
                 ++ +++++s+++ ++ ++           +   +g++ +l+ +  ++l+      ++l+++++sd +g
  EPX71677.1 265 WFANGLIISAFSLYSSTIikgvilpkdasMARIFGWT-VLTQS--FSLP------GSLMGAYFSDVIG 323
                 9999999999999999964555545555566666666.44444..3333......3444455555544 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.0034
       MFS_1 110 iadwfpkeergraigllsagfslGailg.pllggllasslgWravfyilaivsllafvlflll 171
                 +++ +p   rg++ g++ +   lG+i+g +++gg  +     r+ + + +i+ +++f+   ++
  EPX71677.1 328 ASKTSPTAIRGLYCGIAVTVGRLGSIVGiYVFGGDQL----QRYFYAASGIAIFIVFIS--CF 384
                 567778899*******************777777444....577777777777777662..33 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (421 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       786  (0.0438396); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 2888.32
//
Query:       EPX71678.1  [L=181]
Description: hypothetical protein SOCG_01893 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       981  (0.0547158); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1298.16
//
Query:       EPX71679.1  [L=260]
Description: hypothetical protein SOCG_01894 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
       0.18   12.2   6.7       0.29   11.6   6.7    1.3  1  Peptidase_A24  Type IV leader peptidase family
       0.49   10.7   7.8       0.59   10.4   1.3    2.4  2  DUF1772        Domain of unknown function (DUF1772)
        4.7    5.9  11.1       0.65    8.7   2.2    2.0  2  DUF2207        Predicted membrane protein (DUF2207)
        5.7    7.3  14.0       0.24   11.8   3.5    2.1  2  MgtE           Divalent cation transporter


Domain annotation for each model (and alignments):
>> Peptidase_A24  Type IV leader peptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   6.7   6.4e-05      0.29      27     104 ..      89     216 ..      75     219 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 6.4e-05
  Peptidase_A24  27 pllllgvlfa...qllllglpnlaqavlgalvgalvllli...............................................slvdeqamG 72 
                     l++l ++f+   + +++ +  la   +g + ++l+++l+                                               +l+ ++++G
     EPX71679.1  89 NLVFLAIIFGykvSPYSIAFYWLAAVSIGTIFIFLLTILVtypgwyreagratkkcikkfgratkkvlkksgraikkftpavckaliILISLNGVG 184
                    35566666665442334555555555555566666666659************************9999999999999999999999999****** PP

  Peptidase_A24  73 gGDvklaavlgaflgwerlllavlvaillgav 104
                    gG  kla +  ++     l+++ +++i+l ++
     EPX71679.1 185 GGALKLAGGFEYIHSTAVLVVLAVLNICLFVL 216
                    *************9988876666666655444 PP

>> DUF1772  Domain of unknown function (DUF1772)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.3   0.00013      0.59      24      87 ..      69     131 ..      50     158 .. 0.68
   2 ?    3.8   0.7     0.015        66      82     100 ..     227     246 ..     158     258 .. 0.63

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00013
     DUF1772  24 llkqwrrlfkrgkavfpplallsalafa.yla....araasrgarllylaaaal.lllsivpyTllvmvP 87 
                   + w+ +f      ++++ ++++l  + +la      + s+ + + y +aa+   ++ i+++T+lv  P
  EPX71679.1  69 NKECWKDFF------VGLMTIITILYNLvFLAiifgY-KVSPYSIAFYWLAAVSiGTIFIFLLTILVTYP 131
                 567799988......7777777777666555577753.44444444444444444888999999999877 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.015
     DUF1772  82 llvmvPtNnkLaalk.eeda 100
                 ++v+vPtNn++ + + + ++
  EPX71679.1 227 MTVIVPTNNRISRNTpPRNE 246
                 4555*****98888644433 PP

>> DUF2207  Predicted membrane protein (DUF2207)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   2.2   0.00014      0.65     356     451 ..      51     148 ..       2     151 .. 0.57
   2 ?    4.4   2.1     0.003        13     358     430 ..     139     217 ..     130     242 .. 0.51

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00014
     DUF2207 356 alkkwksavkkkergyfdkkgkkklkklsalglgliilglilillallllvll.....lvfllilllillliaiivlllfsrllgrrteeGaellakwk 449
                 a ++ +++v++      d   +k+ +k  ++gl+ ii +l+ ++++++ +++      + f+ + ++ ++ i+i++l ++ ++ g + e G++ ++ +k
  EPX71679.1  51 AQNSAQESVDN---TRSDPSANKECWKDFFVGLMTIITILYNLVFLAIIFGYKvspysIAFYWLAAVSIGTIFIFLLTILVTYPGWYREAGRATKKCIK 146
                 45555555666...2233444455555555555555555554444444444445566655555555555555555555555555556777777777777 PP

     DUF2207 450 gF 451
                  F
  EPX71679.1 147 KF 148
                 66 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.003
     DUF2207 358 kkwksavkk...kergyfdkkgkkklkklsalglgliilglilillallllvll....lvfllilllillliaiivlllf 430
                 ++ k+ +kk   ++++ ++k g++++k   a+  +liil+ + ++++ ++l l+     +    +l++l++++i++++l+
  EPX71679.1 139 RATKKCIKKfgrATKKVLKKSGRAIKKFTPAVCKALIILISLNGVGG-GALKLAggfeYIHSTAVLVVLAVLNICLFVLL 217
                 44444455555444555555555444444444444444433333322.23333334564444444444444444444443 PP

>> MgtE  Divalent cation transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   3.5   5.4e-05      0.24      30      91 ..      66     128 ..      50     150 .. 0.62
   2 ?    1.7   2.6      0.07   3.1e+02      35      85 ..     170     218 ..     139     234 .. 0.53

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 5.4e-05
                 GGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-..........CTSHHHHHHHHHHHHHHHHHH..HHHH CS
        MgtE  30 kklkkvllkelrvvlllgvilgllifllalllgw.........slllalvvglalvlvllaaallilgvll 91 
                 ++++k ++k + v+l++++++   +++la+++g           +l+a+ +g+ +++        +l++l+
  EPX71679.1  66 PSANKECWKDFFVGLMTIITILYNLVFLAIIFGYkvspysiafYWLAAVSIGTIFIF--------LLTILV 128
                 337999*******99999887777777778887755433322211111112222222........223333 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.07
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHT-....CTSHHHHHHHHHHHHHHHHHH CS
        MgtE  35 vllkelrvvlllgvilgllifllalllgw...slllalvvglalvlvllaaall 85 
                 v+   ++++ l+gv  g+l ++      +    +  a++v la++ ++l+++l+
  EPX71679.1 170 VCKALIILISLNGVGGGALKLAG-----GfeyIHSTAVLVVLAVLNICLFVLLV 218
                 22222333333333333333332.....13335556666777777777777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1141  (0.0636399); expected 358.6 (0.02)
Passed bias filter:                      662  (0.0369234); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 1808.03
//
Query:       EPX71680.1  [L=45]
Description: hypothetical protein SOCG_01895 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.3e-19   67.8   8.5    7.4e-19   67.6   8.5    1.1  1  M-factor  M-factor


Domain annotation for each model (and alignments):
>> M-factor  M-factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.6   8.5   4.1e-23   7.4e-19       1      43 []       1      45 []       1      45 [] 0.96

  Alignments for each domain:
  == domain 1  score: 67.6 bits;  conditional E-value: 4.1e-23
    M-factor  1 MDsm...AnnssSSSlvNaannkPtetvtkgvknYtPKvPyMCvIA 43
                MD++    nn   SSlvN+a++kPt+t t+g+ +Y+PK+P+MCvIA
  EPX71680.1  1 MDAInnsSNNGNNSSLVNNAPSKPTVT-TSGASWYQPKPPAMCVIA 45
                999988889999***************.*****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (45 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       259  (0.0144459); expected 358.6 (0.02)
Passed bias filter:                      146  (0.00814323); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.28s 00:00:00.67 Elapsed: 00:00:00.46
# Mc/sec: 296.51
//
Query:       EPX71681.1  [L=559]
Description: arginine permease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   5.6e-109  364.9  38.8   6.8e-109  364.6  38.8    1.0  1  AA_permease    Amino acid permease
    5.6e-31  107.8  45.1    6.7e-31  107.6  44.6    1.3  2  AA_permease_2  Amino acid permease
  ------ inclusion threshold ------
          3    8.4   5.4        2.3    8.7   0.7    2.6  2  DUF4713        Domain of unknown function (DUF4713)


Domain annotation for each model (and alignments):
>> AA_permease  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  364.6  38.8  1.1e-112  6.8e-109       1     473 [.      60     512 ..      60     517 .. 0.97

  Alignments for each domain:
  == domain 1  score: 364.6 bits;  conditional E-value: 1.1e-112
  AA_permease   1 hvlvialggviGtglfvglgvvlsqaGplgallayllagvviflvmlslgeiatngpksggfytyasrflgpelGfviGlnylfswitvlaleltaas 98 
                  h+ +i+lg +iGt+l++g+g  l +aGp+g+++++ +a  + ++ m+s+ge+ +++p+ ++f  ++++ ++ + G + G+ +++++ ++++ el++++
   EPX71681.1  60 HLYMISLGTAIGTALWLGSGANLTTAGPVGMWIGFWIAASIAWALMQSVGELTVMYPVPSAFPRWSQNLVDHSIGISHGWAFWLLYTLGIPTELAGLV 157
                  899*********************************************************************************************** PP

  AA_permease  99 iliqfwelvtdlpkawvtgavflvvlliinlvgvkvygeaefilalikiiaiiafiivgiillaggkpnkga.gfrflgdngsifknnlppgfakeee 195
                   ++qfw  ++++p   +++++fl++l+++n + v+vy+e+e i+++ik+  i + ii +i+++agg+p+    gfr++ ++ +      ++g      
   EPX71681.1 158 TVMQFW--TDKVP-PAGWISIFLFILVVLNAFPVRVYAETESIMSFIKFAWIFIIIITSIVISAGGGPKGSSiGFRYWREAPF------THG------ 240
                  ******..*****.*********************************************99999999998889*****99988......***...... PP

  AA_permease 196 gafknfisvfvivvfaftGielvaiiagEvkdPeksiPkailqvviritifYvlsllligllvprndlgllndsasaaspfvifikesgvsvlaplin 293
                    fk+f+ v++ +vf+++Gielv+i+a+E+k+P+ks+Pk++ ++ +r+++fY++++l+++++++  +++++ ++   aspfvi+++++g+++l++ +n
   EPX71681.1 241 --FKGFLNVMPNAVFSMSGIELVGIAAAEAKNPKKSVPKSVGSIWLRLGLFYIIGILMVTIIISPHSPDIFGGKGADASPFVIAFRNAGIPGLSHAMN 336
                  ..**********************************************************************988779******************** PP

  AA_permease 294 aviltaalssansslysasRvlyslakdglaPkvlkkvskrgvPlraillsmiisllalllaslnlaapivfnfllaisaliglivwlliilsylrfR 391
                  a+il++++s+ans +y+a+R+l  la+ ++aPk++ +++++g+Pl + l++++is  +  l+  +++  +vf+++ +++ l  l  w++i l++lrfR
   EPX71681.1 337 AIILISVFSAANSEVYTAPRILVGLAEVKMAPKWFLRCDRQGRPLYGFLFTILISGGLAYLNVNQTG-STVFQWFESLVSLCVLYSWGCIFLAHLRFR 433
                  ******************************************************9877756655565.6***************************** PP

  AA_permease 392 kalkyqgrsieelgfkaallplgvilvlaaliiillilalyayltvkkgpkdwgaasfaaaylivllfliilvgvklhvknk 473
                  ka+k+qg s+++l+ k+ ++p+ +i+++  +i+i++i ++ a+ +    +k ++a +f+a+yl+++l++ii+++ k++++ +
   EPX71681.1 434 KAWKVQGFSADQLPWKSKFYPFSAIWGISWCILICIIEFYLAVWP---LGKPSSARNFFATYLSIVLIVIIYCAAKIYYRGP 512
                  *********************************************...556679************************9966 PP

>> AA_permease_2  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.6  44.6   1.1e-34   6.7e-31       2     424 ..      57     500 ..      56     501 .. 0.81
   2 ?   -3.3   0.0      0.51     3e+03     293     320 ..     528     555 ..     528     556 .. 0.86

  Alignments for each domain:
  == domain 1  score: 107.6 bits;  conditional E-value: 1.1e-34
  AA_permease_2   2 sllsafalvigsvigsgifvkn..laasggpa.lilwvwiavligslavllvyaElssalprsgGiyvytkaafgkkvaflsawfnwfayvpvlas 94 
                    s + + ++++g++ig++    +  +++++gp+  ++ +wia+ i  +a++    El+ + p       +++++  + ++   +w++w+ y +++++
     EPX71681.1  57 SSRHLYMISLGTAIGTALWLGSgaNLTTAGPVgMWIGFWIAASIA-WALMQSVGELTVMYPVPSAFPRWSQNLVDHSIGISHGWAFWLLYTLGIPT 151
                    55678999*******999888888778899986455556666666.78888899***99************************************* PP

  AA_permease_2  95 ilsvaasyllnalgpdlqgntwltyliaiaililvalinirgikesakiqnilgilkillpliiliilglitvdgggfssl....stetdt....f 182
                     l+ ++  ++++++ ++ +  w+++     +l +++++n++ ++ +a   +i+  +k+   ++i+ii+ +++  ggg   +         +     
     EPX71681.1 152 ELAGLVTVMQFWTD-KVPPAGWISI-----FLFILVVLNAFPVRVYAETESIMSFIKF-AWIFIIIITSIVISAGGGPKGSsigfR----YwreaP 236
                    ***99999999776.6656544443.....36667789********************.588888888888877776665545540....234459 PP

  AA_permease_2 183 fpngwpgvllgllivlwsfdGfesaanvseevkk..kdvpkaifigllivlvlyllvniaflgvvpddeianlsn...lgsvaalffeavggkvva 273
                    f++g +g+l++++ +++s++G+e +   + e+k+  k vpk   +++l  +++y+   + +++++++ + +  ++     s++ + f+++g + ++
     EPX71681.1 237 FTHGFKGFLNVMPNAVFSMSGIELVGIAAAEAKNpkKSVPKSVGSIWLRLGLFYIIGILMVTIIISPHSPDIFGGkgaDASPFVIAFRNAGIPGLS 332
                    *******************************8877478*****************9988888888887775444422235579************* PP

  AA_permease_2 274 iivvilialsllgaintavigssrvlealardgvlPrffakvnkfgspiraiiltaivslillllfllas...saaynfllsvsslgliisyllli 366
                    ++++++i +s++ a+n+ v++++r+l  la+ ++ P++f + +++g+p+++  +t ++s   +l++l ++   s+ +++  s+ sl+++ s++ ++
     EPX71681.1 333 HAMNAIILISVFSAANSEVYTAPRILVGLAEVKMAPKWFLRCDRQGRPLYGFLFTILIS--GGLAYLNVNqtgSTVFQWFESLVSLCVLYSWGCIF 426
                    ***************************************************99999999..4444554446779********************** PP

  AA_permease_2 367 igalilrkkrphl...kr.....pgkilvaiig.....alfllfllvalffppkgpatqssliyt...iiltva 424
                    ++ l  rk  +++           +++++++i+     +l++++ ++++ +p+ +p+  ++++ t   i+l+v+
     EPX71681.1 427 LAHLRFRKAWKVQgfsADqlpwkSKFYPFSAIWgiswcILICIIEFYLAVWPLGKPSSARNFFATylsIVLIVI 500
                    ****9999988775551155433444655555543334444555567777*******99999888665555554 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 0.51
  AA_permease_2 293 igssrvlealardgvlPrffakvnkfgs 320
                    ++s+r ++++ ++++l+ ff+++ k+ +
     EPX71681.1 528 FYSNRSANDDTEEDELYAFFKSTIKKII 555
                    6899****************99877655 PP

>> DUF4713  Domain of unknown function (DUF4713)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.3      0.12   7.3e+02      17      40 ..     160     183 ..     147     186 .. 0.78
   2 ?    8.7   0.7   0.00039       2.3      35      51 ..     488     504 ..     487     507 .. 0.92

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.12
     DUF4713  17 lqpfqspwdiaaFvvlllFigtVl 40 
                  q+  +++  a  + ++lFi+ Vl
  EPX71681.1 160 MQFWTDKVPPAGWISIFLFILVVL 183
                 67777888888888999***9998 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00039
     DUF4713  35 FigtVllLlllaclycc 51 
                 F++t l+++l++++yc 
  EPX71681.1 488 FFATYLSIVLIVIIYCA 504
                 9***************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (559 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       630  (0.0351386); expected 358.6 (0.02)
Passed bias filter:                      303  (0.0169); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.71u 0.33s 00:00:01.04 Elapsed: 00:00:00.58
# Mc/sec: 2912.43
//
Query:       EPX71682.1  [L=206]
Description: hypothetical protein SOCG_01897 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-13   50.0  13.9    2.2e-13   50.0  13.9    1.8  2  bZIP_2    Basic region leucine zipper
    0.00043   20.3   9.5    0.00081   19.4   9.5    1.4  1  bZIP_1    bZIP transcription factor
     0.0052   17.0   1.2     0.0091   16.2   1.2    1.4  1  XhlA      Haemolysin XhlA
  ------ inclusion threshold ------
      0.028   12.6   1.4      0.038   12.2   1.4    1.1  1  FPP       Filament-like plant protein, long coiled-coil
      0.034   14.3   0.9      0.063   13.4   0.9    1.4  1  DUF4543   Domain of unknown function (DUF4543)
      0.037   14.6   6.4      0.066   13.7   6.4    1.3  1  bZIP_Maf  bZIP Maf transcription factor
       0.57   10.5   7.7       0.72   10.2   7.7    1.3  1  DUF737    Protein of unknown function (DUF737)


Domain annotation for each model (and alignments):
>> bZIP_2  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.68   1.7e+03      15      33 ..      57      75 ..      56      77 .. 0.80
   2 !   50.0  13.9   8.8e-17   2.2e-13       4      54 .]     131     181 ..     129     181 .. 0.96

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.68
                XXXX-HHHHHHHHHHHHHH CS
      bZIP_2 15 AarrsRekkkakeeeleer 33
                A ++s+e k +  e+le+ 
  EPX71682.1 57 ATASSKEEKLISAEQLEDG 75
                5678999999999999976 PP

  == domain 2  score: 50.0 bits;  conditional E-value: 8.8e-17
                 XXXXXXXXXXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_2   4 eyrerRrkNreAarrsRekkkakeeeleervkeLeeeNaqLrqkveqLeke 54 
                 e++erRr+N+ A++r+R+++kake++le++v+e e+++ qL+q++ +Le e
  EPX71682.1 131 EDKERRRRNTLASARFRQRRKAKEQYLEQTVQEYEKKIKQLEQRIYELELE 181
                 789********************************************9976 PP

>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   9.5   3.2e-07   0.00081       9      57 ..     135     183 ..     131     190 .. 0.90

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 3.2e-07
                 XX--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   9 rkqkNReaArrsRqRKqaeieeLerrvkaLekeNksLkseleelkkeve 57 
                 r+ +N  a +r+RqR++a+ + Le+ v++ ek+ k+L +++ el+ e +
  EPX71682.1 135 RRRRNTLASARFRQRRKAKEQYLEQTVQEYEKKIKQLEQRIYELELETK 183
                 7889***************************************997766 PP

>> XhlA  Haemolysin XhlA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   1.2   3.6e-06    0.0091      22      53 ..     156     187 ..     148     190 .. 0.90

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 3.6e-06
        XhlA  22 kleekaaeaeekiknleedlkklesnqkWlir 53 
                  le+   e e+kik+le ++ +le  +kW++ 
  EPX71682.1 156 YLEQTVQEYEKKIKQLEQRIYELELETKWFKD 187
                 5999*************************975 PP

>> FPP  Filament-like plant protein, long coiled-coil
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   1.4   1.5e-05     0.038     231     285 ..     133     188 ..     127     191 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.5e-05
         FPP 231 gesrlrrspaksssa.llskveefsedsleklqkenefLterLlameeEtkmLKEa 285
                 +e r+r+++a++        +e+++e+++++ +k+++ L +r+ ++e Etk  K+ 
  EPX71682.1 133 KERRRRNTLASARFRqRRKAKEQYLEQTVQEYEKKIKQLEQRIYELELETKWFKDL 188
                 455555555554433444456799****************************9985 PP

>> DUF4543  Domain of unknown function (DUF4543)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.9   2.4e-05     0.063      21      59 ..     147     186 ..     130     198 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 2.4e-05
     DUF4543  21 rqdrerkaGypdePmreyllylqrleqraeeqfle.hWln 59 
                 rq r+ k  y ++ ++ey   +++leqr  e  le +W+ 
  EPX71682.1 147 RQRRKAKEQYLEQTVQEYEKKIKQLEQRIYELELEtKWFK 186
                 788999****************************944765 PP

>> bZIP_Maf  bZIP Maf transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   6.4   2.6e-05     0.066      32      82 ..     133     183 ..     129     191 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 2.6e-05
    bZIP_Maf  32 rRRrlKNrgyakscrkrrlqqkeelekekeeleeelerlqqelsrlrqekd 82 
                 + Rr++N ++ ++ r+rr  +++ le+  +e e++ ++l+q++ +l+ e+ 
  EPX71682.1 133 KERRRRNTLASARFRQRRKAKEQYLEQTVQEYEKKIKQLEQRIYELELETK 183
                 457888************************************999998875 PP

>> DUF737  Protein of unknown function (DUF737)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   7.7   0.00028      0.72     107     169 ..     125     187 ..       6     192 .. 0.68

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00028
      DUF737 107 elakllerEreaaqeelteailrerlstedErlkaqllelerkarqLeekekeLkkqdafYke 169
                  +  ++e   + ++++l++a  r+r ++++  l+    e e+k++qLe++  eL+   +++k+
  EPX71682.1 125 GVVGVVEDKERRRRNTLASARFRQRRKAKEQYLEQTVQEYEKKIKQLEQRIYELELETKWFKD 187
                 455556655566778899**99*99999999877777777***************99999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (206 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2100  (0.117129); expected 358.6 (0.02)
Passed bias filter:                     1310  (0.073066); expected 358.6 (0.02)
Passed Vit filter:                       193  (0.0107647); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.54u 0.33s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 1393.10
//
Query:       EPX71683.1  [L=71]
Description: hypothetical protein SOCG_06152 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.1e-05   24.5   4.4    5.1e-05   24.5   4.4    1.1  1  Ecl1        ECL1/2/3 zinc binding proteins
  ------ inclusion threshold ------
       0.02   15.3   3.6      0.024   15.1   3.6    1.2  1  zf-C4pol    C4-type zinc-finger of DNA polymerase delta
      0.022   14.6   2.9      0.022   14.6   2.9    1.5  2  zf-HIT      HIT zinc finger
       0.03   14.4   3.0      0.036   14.2   3.0    1.1  1  zf-RRPl_C4  Putative ribonucleoprotein zinc-finger pf C4 type
      0.044   13.8   1.9      0.059   13.4   1.9    1.2  1  DUF2116     Uncharacterized protein containing a Zn-ribbon (D
      0.087   13.2   6.6      0.087   13.2   6.6    1.7  2  C1_2        C1 domain


Domain annotation for each model (and alignments):
>> Ecl1  ECL1/2/3 zinc binding proteins
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   4.4   1.7e-08   5.1e-05       6      46 ..       4      42 ..       1      68 [. 0.74

  Alignments for each domain:
  == domain 1  score: 24.5 bits;  conditional E-value: 1.7e-08
        Ecl1  6 qfCamCEkqivpsnsiLYCSEaCRrkDsekslssssssss.s 46
                ++C++C +++   ++ LYC ++C+ +Ds+ +  s+ + +s +
  EPX71683.1  4 DYCIVCGNDT---DDHLYCCDQCKAHDSTEHRRSTDQRMSvE 42
                8*********...9*************887777777766532 PP

>> zf-C4pol  C4-type zinc-finger of DNA polymerase delta
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   3.6   8.1e-06     0.024       1      41 [.       6      48 ..       6      66 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 8.1e-06
    zf-C4pol  1 ClvCkeklk..kalCkkCrsdkqesllkllsrlkelekklnel 41
                C+vC++ ++     C++C+++++++  +  ++  ++e++++ l
  EPX71683.1  6 CIVCGNDTDdhLYCCDQCKAHDSTEHRRSTDQRMSVEQNFQLL 48
                *****877777899*****999999988888888899888755 PP

>> zf-HIT  HIT zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   2.9   7.2e-06     0.022       4      22 ..       5      26 ..       3      29 .. 0.93
   2 ?   -3.0   0.2       2.3   6.9e+03      14      17 ..      55      58 ..      54      59 .. 0.45

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 7.2e-06
                B-TTT-S...B-SEE-TTT--E CS
      zf-HIT  4 lCgvCgf...pakYkCpkCntr 22
                 C+vCg+    + Y C +C+++
  EPX71683.1  5 YCIVCGNdtdDHLYCCDQCKAH 26
                6******************986 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 2.3
                EE-T CS
      zf-HIT 14 YkCp 17
                Y C 
  EPX71683.1 55 YFCK 58
                4444 PP

>> zf-RRPl_C4  Putative ribonucleoprotein zinc-finger pf C4 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   3.0   1.2e-05     0.036       6      63 ..       5      62 ..       2      70 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 1.2e-05
  zf-RRPl_C4  6 yClskklknlnetvyCeaCeiyfkvknekqkvelvpik.elekislrdkLCtkCkekne 63
                yC+    ++ ++ + C++C+ +  ++ ++ +++ + ++ +++ +s+ ++L   Ck+ + 
  EPX71683.1  5 YCIVCGNDTDDHLYCCDQCKAHDSTEHRRSTDQRMSVEqNFQLLSM-EHLSYFCKRPTV 62
                6666555666667778**********************77888888.99*999998665 PP

>> DUF2116  Uncharacterized protein containing a Zn-ribbon (DUF2116)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   1.9     2e-05     0.059       5      40 ..       5      39 ..       2      48 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 2e-05
     DUF2116  5 HCivCGkaIpldesfCsekCqeeyekkrkkvarsqq 40
                 CivCG+    d   C ++C+   + + ++   +++
  EPX71683.1  5 YCIVCGNDT-DDHLYCCDQCKAHDSTEHRRSTDQRM 39
                6******96.5889999****998888888766665 PP

>> C1_2  C1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   6.6   2.9e-05     0.087      20      39 ..       5      24 ..       2      31 .. 0.90
   2 ?   -1.4   0.0         1   3.1e+03      32      36 ..      54      58 ..      47      61 .. 0.66

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.9e-05
        C1_2 20 nCsaCgrkidgffYsCseCd 39
                 C +Cg+++d+  Y C++C+
  EPX71683.1  5 YCIVCGNDTDDHLYCCDQCK 24
                5*******99999******6 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1
        C1_2 32 fYsCs 36
                 Y C+
  EPX71683.1 54 SYFCK 58
                37775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       872  (0.0486363); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.42u 0.28s 00:00:00.70 Elapsed: 00:00:00.45
# Mc/sec: 473.60
//
Query:       EPX71684.1  [L=769]
Description: oligopeptide transporter 7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     4e-142  475.0  46.7   4.6e-142  474.8  46.7    1.0  1  OPT       OPT oligopeptide transporter protein


Domain annotation for each model (and alignments):
>> OPT  OPT oligopeptide transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  474.8  46.7  2.6e-146  4.6e-142       2     616 .]      81     743 ..      80     743 .. 0.97

  Alignments for each domain:
  == domain 1  score: 474.8 bits;  conditional E-value: 2.6e-146
         OPT   2 lTlRavvlGillgvlgsavnmyfglrtglvsissipaallafplgkalarilpk.........lslnpgpftikEnvliqtmasaaatlalatglivvi 91 
                 lT+R +++ +++   g+++ ++ + rt + + s++++++ +++lgk+la++lpk         +slnpgpf+ikE vl+++ a+++at++ +t  i+v 
  EPX71684.1  81 LTFRYFLMTLIFIPPGAFLDTMSSYRTSSAAYSVFFVQIASYWLGKWLAKVLPKkrvplgrlsFSLNPGPFSIKECVLVTLSAASGATGSQGTTSISVA 179
                 8************************************************************************************************** PP

         OPT  92 palelygqsagfgylillslsvqllGvgfagplRkflvypeklifPsglataellkalhkpegee...ksrlkfflivflgsfvwglfplylfpalssf 187
                 +++  y+++++ + +i++++++  +G+ fa + R+fl+y++++ +P++l+++ l++a+ k++++    ++++++f+i ++g  +w++fp+y+fp++ s+
  EPX71684.1 180 ELF--YNEKVNPAVAIFFMWAIVWTGYSFAAIARNFLLYDPQYQWPQALMQTSLFEAFRKSDENSklaAKKMRVFFIGLIGLTIWQFFPEYIFPMTGSL 276
                 ***..*********************************************************9879********************************* PP

         OPT 188 swltwiapknvvlanlf....glgllpltfdwnviaayiGsglivplwvavnmliGavlswgiliPll.yysngwypaylp...........ydvteil 270
                 ++l+w+ap+n+v++++     g+g+l++t+dw+ i++ i   +i+p+w++v  +  +vl+ +il+P++ +   g +   l            y  t+ +
  EPX71684.1 277 AFLCWVAPRNKVANFIGsgmaGMGFLNFTLDWSNITSSI---MIMPYWTQVLKFCAFVLGAWILLPAAkWGNLGSFKHGLMsnnlflkngtvYPATRLM 372
                 ****************9********************99...**************************777767777777779999************* PP

         OPT 271 dedgvldyekyigyglmllaalvallylvqfaaitllivhtilkhgkdikaalksa.......rsprteeddrhrrlmrkykdvpmwwylallvlslvi 362
                 ++++++++++y+++g+ +++    +++++ +a++ ++i++ i+++ k+i ++ k++       ++ + e++dr ++++r+ykdvp ww+++l+v+s+vi
  EPX71684.1 373 TSNFTFNETAYQELGPGYMGVQKIWIMFFDYASYISAISWIIFFGHKQILSSGKKFyhrmrygGNISNEYTDRLNKIQRSYKDVPLWWFIVLFVISFVI 471
                 ********************************************************999988777999******************************* PP

         OPT 363 giivvealftqlpvwglllalllafllaivsaiiaGltglnpvsgigkltqlifgallpg.....rpvanlvfgavvyaaaaqagdfmqDLKtGhllka 456
                 +i +++   + lp+w++++al++++ +++++a++++l+++  + +ig + +li+g+++       +p+ +  +gav+  a++ a+ ++qD+K+Gh++++
  EPX71684.1 472 LITIFATGNMFLPWWAYIVALGFGATIVTPMAWLYALSNF--QLAIGTFNELIYGYMIHAvsgfkHPAGASSYGAVAGDAWYRAQYMLQDQKIGHYMHI 568
                 ****************************************..******************999999********************************* PP

         OPT 457 sPraqfvaqliGtlvgavvniavlkllv...kaygdictadasnaftaPqakvfaavavl..lvggk........kglpwafllgavapfilllllkkf 542
                 +Pra+f++q++G l+g+ vn++ l++++   +ay  + + d+ +++t+++  +++++a++  l+g+k        ++lp++f++ga+ap++++ll + f
  EPX71684.1 569 PPRAVFFSQIFGELLGVPVNYGCLRWVLntkSAYLSGKEKDPLHQWTGQSLISYNTLAIQyvLIGPKrlfkeamyRPLPYGFVVGAFAPALFYLLYRLF 667
                 ****************************55556777777************************************************************ PP

         OPT 543 pkkstarklplplafa..vgfylppsl.sialligglianlwlkrrdaewakkynyvlaaGLiaGealmgviiaflv 616
                 p k++++ ++++++++    fy ++s+ +++ +igg+i+n++ +r+++e ++kyny+l+a++++  +l+ ++i++++
  EPX71684.1 668 P-KGKFHLWNVTIFCStmSNFYGNLSTgYLSSFIGGTITNFYFYRYRHELWRKYNYILGAAFDTAFNLAMLLIFIFF 743
                 *.**************9899*******666********************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (769 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       971  (0.0541581); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.70u 0.31s 00:00:01.01 Elapsed: 00:00:00.45
# Mc/sec: 5133.92
//
Query:       EPX71685.1  [L=588]
Description: hypothetical protein SOCG_01899 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-17   63.3  19.5    2.4e-17   62.9  19.5    1.1  1  MFS_1     Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.9  19.5   1.3e-21   2.4e-17       2     352 ..     133     511 ..     131     512 .. 0.73

  Alignments for each domain:
  == domain 1  score: 62.9 bits;  conditional E-value: 1.3e-21
       MFS_1   2 llaaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllll.fa...sslwlllvlrvlqG 96 
                 ++++f   l+r+++  al+     dlg++   ++  + +++  +++a lp   +s r+G+ r++ + ++l+++  +++  f    +    ++  r+l G
  EPX71685.1 133 CIMFFALELDRANIKQALSDNFLGDLGMTTNDYNNGMIVFYCSFLLAELPSQLVSKRVGPDRWIPTQITLWSIV-TIFQiFLknkA---SFYGTRALLG 227
                 6778888888999999999955599*************************************************.77765643334...5********* PP

       MFS_1  97 lgagalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslg......Wravfyilaivsllafvlfllllpeepperkrkspkeee. 188
                 + +g+++p ++ +++  ++++e ++ ++++ ++ s++ i+++  +  ++ ++g      Wr++f+i ++++l  ++l    +   p+ + + +++ ++ 
  EPX71685.1 228 VLEGGFIPDVVLYLSYFYTGSELNLRFSVFWIFLSIADIFAAFSAVGILKLGGihglsgWRYLFLIQGLITLTIGLL---SYGMMPSGPTTTASWFRGk 323
                 *****************************************999999998888999********************5...5544455555555555522 PP

       MFS_1 189 .................kgtgpaplvp.......awkallkdpvlw.....illialllfffgfsg....lltllplylqevlglsglllaglllalla 254
                                           +       + ++ l+++ +w     + l+ l+ ++++f++       +l+l   + lg+s++ +++ l+  + 
  EPX71685.1 324 kgwfserqekiivnrvlR--------DdpskgtmHNRQALTPKLFWkaicdYHLWPLYAIGICFNIpyipPNNYLTLN-LKSLGFSTVKSNL-LVLPST 412
                 222655555444444431........1555555556666666666666666555555555566666667899999996.9******544444.444444 PP

       MFS_1 255 lvgailallagrlsdrlgrrrrlllallll.llaalglallavtssavllll..vlvliGf.glgfvfpsllalasdlappeeagtasglfntagslgg 349
                 ++++i  l ++++s  +g ++   ++  +  l ++++l++l+++ ++ ++l+  + +++G+  +  +++ ++++ s+++  + +   ++l+n+  ++g+
  EPX71685.1 413 FLTIINLLAISFFSEMVGEKTLVCMGPQFYvLPLLIALYVLPAS-TSKWVLYvlSTMIVGTpYAHAIQVGWNSQNSNSV--RTRTVSASLYNVSVQIGS 508
                 44444466667777776663333333322202333333333333.3344444136666999777777************..*****************9 PP

       MFS_1 350 alg 352
                 +++
  EPX71685.1 509 IMS 511
                 975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (588 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       537  (0.0299515); expected 358.6 (0.02)
Passed bias filter:                      333  (0.0185733); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.21s 00:00:00.74 Elapsed: 00:00:00.38
# Mc/sec: 4636.86
//
Query:       EPX71686.1  [L=204]
Description: NADPH-dependent FMN reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.3e-26   93.2   0.0    1.7e-26   92.8   0.0    1.1  1  FMN_red       NADPH-dependent FMN reductase
    7.4e-05   22.5   0.0    7.8e-05   22.5   0.0    1.3  1  Flavodoxin_2  Flavodoxin-like fold


Domain annotation for each model (and alignments):
>> FMN_red  NADPH-dependent FMN reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.8   0.0   1.9e-30   1.7e-26       2     145 ..       5     152 ..       4     157 .. 0.90

  Alignments for each domain:
  == domain 1  score: 92.8 bits;  conditional E-value: 1.9e-30
                 EEEEEES--STT-HHHHHHHHHHCCT-T.....T-CEEEEETTTS.--..........---HCHGHTCGGSHHHHHHHHHHHH-SCEEEEEEECTTCE- CS
     FMN_red   2 kilvisGSlrkgsntrklaewaaealkea....gaevelidladlilpc........alcdkdlesegqtsddvaellekiaaadaliivtPeYngsys 88 
                 ki++i  S r+ + ++ +++++ + ++ +    g+ v+ +d+++++lp          l++ +++++ ++++ +++++  i   da i+vtP+Yn+s++
  EPX71686.1   5 KIALITSSCRSTRLNPFITDYVRSVIASSnlpnGISVHTVDVKNFNLPIyneprvpvSLPK-HDPTSYYQHETTRKWSLEIGIYDAYIFVTPQYNWSIP 102
                 89************************9999**99**************6666655533333.555559******************************* PP

                 HHHHHHHHCHT-.SSCHCCTT-EEEEEEE-SSTTTTHHHHHHHHHHHHHTT-EEEEC CS
     FMN_red  89 gllKnalDrlsrtrgkkelrgKpvalvavgggrrgglraeeqlrqvlaelgaivvpr 145
                 + lKna+D l      +e++gKp+++v++gg  +ggl+a+++l ++ + l+++ v++
  EPX71686.1 103 ASLKNAIDFL-----FHEWTGKPAGIVTYGG--HGGLKAASHLQDIIRGLRMQRVST 152
                 **********.....7***********9986..7****************9987765 PP

>> Flavodoxin_2  Flavodoxin-like fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   8.6e-09   7.8e-05      75     106 ..      84     115 ..       4     152 .. 0.77

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 8.6e-09
                   HHCSSEEEEEEE-BTTB--HHHHHHHHHHS-T CS
  Flavodoxin_2  75 llaadaivlqfPlwwfgvPailKgwiDrvlta 106
                   +   da+++++P +++++Pa lK+ iD  +  
    EPX71686.1  84 IGIYDAYIFVTPQYNWSIPASLKNAIDFLFHE 115
                   5557***********************98864 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       402  (0.0224218); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.29s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 1425.65
//
Query:       EPX71687.1  [L=298]
Description: CRCB domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-36  125.0  18.3    3.7e-22   78.4   3.4    2.6  3  CRCB             CrcB-like protein, Camphor Resistance (CrcB)
  ------ inclusion threshold ------
      0.026   14.8   0.5       0.36   11.1   0.1    2.4  2  MscL             Large-conductance mechanosensitive channel, 
       0.26   11.7   3.2        7.7    7.0   0.0    2.8  3  Phage_holin_3_1  Phage holin family (Lysis protein S)
        3.1    7.8   7.0          2    8.4   0.2    2.8  3  UCR_UQCRX_QCR9   Ubiquinol-cytochrome C reductase, UQCRX/QCR9


Domain annotation for each model (and alignments):
>> CRCB  CrcB-like protein, Camphor Resistance (CrcB)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.1   4.5   3.2e-18   1.4e-14       8      78 ..       1      96 [.       1     117 [. 0.74
   2 ?   -0.8   0.3      0.44     2e+03      39      39 ..     133     133 ..      86     172 .. 0.48
   3 !   78.4   3.4   8.4e-26   3.7e-22       3      93 ..     178     284 ..     177     287 .. 0.87

  Alignments for each domain:
  == domain 1  score: 54.1 bits;  conditional E-value: 3.2e-18
                HHHHHHHHHH.HHHHBE....BHHHHHHHHHHHHHHHHHHH................HHTTTHHHHHS-SHHHHHHHHHHHHHT-HHHHH......H CS
        CRCB  8 alGallRyllssllnkr....plgtlavNvlGsfllgllla................llttGflGglTTfStfvlelvslleegellaal......l 78
                +lG+l+R++l  +ln+     ++g++++ ++G++++g++ +                ++ttGf+G+lTTfS+++le+++ +++ + ++ +      l
  EPX71687.1  1 MLGTLARLGL-AALNTYpntpFTGIVWAQIVGCIIMGFAQTetvffprpkhnavlllAITTGFCGSLTTFSSWMLEMFTAMANLDPFQPRgrgdsfL 96
                69********.6666667997569**************87777777777777766666*********************887655554445655542 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.44
                 H CS
        CRCB  39 l 39 
                 l
  EPX71687.1 133 L 133
                 0 PP

  == domain 3  score: 78.4 bits;  conditional E-value: 8.4e-26
                 HHHHHHHHHHHHHHH.HHHHBE....BHHHHHHHHHHHHHHHHHHH................HHTTTHHHHHS-SHHHHHHHHHHHHHT-HHHHHHHHH CS
        CRCB   3 valggalGallRyllssllnkr....plgtlavNvlGsfllgllla................llttGflGglTTfStfvlelvslleegellaallyvl 81 
                  ++++++Ga lR++ls+++n+     p+gtl++N+lG++l++++++                 +++Gf+G+lTT Stfv+el+++ ++    +a +y++
  EPX71687.1 178 SLIFSPFGATLRLYLSRWFNSPkyymPYGTLMANLLGTLLIAIVYMiprithcspvsqsvlyGFQNGFCGCLTTLSTFVNELYNMPTK----RAYIYFI 272
                 689************9999988***999***************99977766666665555555*********************9765....489**** PP

                 HHHHHHHHHHHH CS
        CRCB  82 lsvvlgllavvl 93 
                 lsv++g+ ++v+
  EPX71687.1 273 LSVAIGFSFCVV 284
                 *******99887 PP

>> MscL  Large-conductance mechanosensitive channel, MscL
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.11   4.8e+02      24      52 ..      92     119 ..      92     140 .. 0.77
   2 ?   11.1   0.1     8e-05      0.36       8      84 ..     143     221 ..     137     231 .. 0.77

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.11
        MscL  24 GaaftkiVtslvkdiimpliglllggvdf 52 
                 G +f ++V++++  i m + +ll+g+  +
  EPX71687.1  92 GDSFLAVVSTFTLTISMAFSSLLFGKQ-L 119
                 67899*************999999653.2 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 8e-05
        MscL   8 filrGnvidLAvgviiGaaftkiVtslvkdiimpliglllggvdfselkikl........kaeaavlkygafiqavinFliiafv 84 
                  i+rG ++ LAvg  +G    +i t+ +kdi    ig+ l    fs + ++l        ++++ ++ yg+++++++  l+ia+v
  EPX71687.1 143 LIVRGLLLLLAVGFFVGI---SIYTAYTKDITHRGIGFSLI---FSPFGATLrlylsrwfNSPKYYMPYGTLMANLLGTLLIAIV 221
                 799**************7...57889999999999986551...22222222223456778899******************987 PP

>> Phage_holin_3_1  Phage holin family (Lysis protein S)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.0    0.0017       7.7      46      73 ..      57      84 ..      17      88 .. 0.69
   2 ?   -3.0   0.0       2.3     1e+04      22      40 ..     100     118 ..      95     124 .. 0.67
   3 ?    4.4   0.3     0.011        51      50      82 ..     244     279 ..     209     280 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0017
  Phage_holin_3_1 46 lleallCgllalavrsllellglpasla 73
                     ++    Cg+l+ + + +le++++ a+l 
       EPX71687.1 57 AITTGFCGSLTTFSSWMLEMFTAMANLD 84
                     344568***************9988775 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 2.3
  Phage_holin_3_1  22 iaavlAlviallrviYdgk 40 
                      + ++l + +a+  ++++++
       EPX71687.1 100 STFTLTISMAFSSLLFGKQ 118
                      5566777777777777665 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.011
  Phage_holin_3_1  50 llCgllalavrsllellglp...aslavviggliGf 82 
                        Cg+l+   + + el+++p   a +  +++++iGf
       EPX71687.1 244 GFCGCLTTLSTFVNELYNMPtkrAYIYFILSVAIGF 279
                      57***9999999999998883223444568999999 PP

>> UCR_UQCRX_QCR9  Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.1     0.025   1.1e+02       9      38 ..      49      78 ..      43      81 .. 0.90
   2 ?   -3.5   0.3       2.3     1e+04      12      18 ..     100     106 ..      95     114 .. 0.59
   3 ?    8.4   0.2   0.00045         2       2      33 ..     258     289 ..     257     291 .. 0.94

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.025
                    SSHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  UCR_UQCRX_QCR9  9 rrnstfvltifagAfvferafDsatdkiWd 38
                    + n++ +l+i +g +   ++f s++ +++ 
      EPX71687.1 49 KHNAVLLLAITTGFCGSLTTFSSWMLEMFT 78
                    78***********9999999**99988886 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 2.3
                     HHHHHHH CS
  UCR_UQCRX_QCR9  12 stfvlti 18 
                     stf+lti
      EPX71687.1 100 STFTLTI 106
                     4555555 PP

  == domain 3  score: 8.4 bits;  conditional E-value: 0.00045
                     HHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHH CS
  UCR_UQCRX_QCR9   2 tlYntlfrrnstfvltifagAfvferafDsat 33 
                      lYn+  +r + +++  +a +f f +++D at
      EPX71687.1 258 ELYNMPTKRAYIYFILSVAIGFSFCVVIDGAT 289
                     69***************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (298 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       561  (0.0312901); expected 358.6 (0.02)
Passed bias filter:                      269  (0.0150036); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2182.46
//
Query:       EPX71688.1  [L=56]
Description: hypothetical protein SOCG_06153 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       430  (0.0239835); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.24s 00:00:00.61 Elapsed: 00:00:00.41
# Mc/sec: 412.83
//
Query:       EPX71689.1  [L=228]
Description: elongation factor 1-gamma [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-09   37.6   0.2      3e-09   37.0   0.2    1.3  1  GST_C     Glutathione S-transferase, C-terminal domain
    4.9e-09   36.4   0.0    8.5e-09   35.6   0.0    1.4  1  GST_N     Glutathione S-transferase, N-terminal domain
    7.4e-08   32.3   0.0    1.4e-07   31.4   0.0    1.5  1  GST_C_2   Glutathione S-transferase, C-terminal domain
    8.9e-06   25.8   0.1    1.4e-05   25.2   0.1    1.3  1  GST_C_3   Glutathione S-transferase, C-terminal domain
    0.00013   21.6   0.0    0.00025   20.8   0.0    1.4  1  GST_C_6   Glutathione S-transferase, C-terminal domain
     0.0037   17.6   0.0     0.0066   16.8   0.0    1.4  1  GST_N_3   Glutathione S-transferase, N-terminal domain


Domain annotation for each model (and alignments):
>> GST_C  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.0   0.2     1e-12     3e-09      17      89 ..     104     193 ..      92     196 .. 0.81

  Alignments for each domain:
  == domain 1  score: 37.0 bits;  conditional E-value: 1e-12
                 H.................HHHHHHHHHHHHHHHHHHHHHHHHHHTSSSSSTTSSCHHHHHHHHHHHHHHHHTTTTT.TTTSHHHHHHHHHH CS
       GST_C  17 e.................ekkeelvdealekvaevlsaleeelkkqdylvGdkltlADialvpilnwlqrlglafg.qekfpnlkawleri 89 
                 e                 + ++ + + a++k + +l ++e + k++ +lvG+ +t+AD+a+v+ l ++ + +   +  +kfp++ +++++ 
  EPX71689.1 104 EfydavipwvagrmrsipYDPK-TEEDAKKKSFSILTVFERQVKDKEFLVGEDPTIADAAAVAHLYFVLSSVMTKDdLAKFPEIERYYKNA 193
                 4444444555555555645555.7789999****************************************9999999**********9975 PP

>> GST_N  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.6   0.0   2.8e-12   8.5e-09       3      75 ..       4      75 ..       2      76 .. 0.89

  Alignments for each domain:
  == domain 1  score: 35.6 bits;  conditional E-value: 2.8e-12
                EEEESSSTSHTHHHHHHHHHHTT-EEEEEEECSTTTCGGCHHHHHHCTTS-SSEEEET.TEEEESHHHHHHHHH CS
       GST_N  3 ltlysirgsprahrirlllaakgveyevvpldfeageekspellklnplgkvPaLedn.gkkltESraIleYia 75
                +t+y+ ++spr+  ++ ++a +g+ +e     +  ++  ++ l++++p++k+P++++  g +l++S aI+ Y a
  EPX71689.1  4 GTVYGSVKSPRVGMVLSTAAMLGLGVENASNSLPGAF--PKHLADKFPIQKIPVFVGAdGTCLWQSLAIASYFA 75
                699*************************888873333..4689999999********99*************76 PP

>> GST_C_2  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4   0.0   4.7e-11   1.4e-07       6      68 ..     129     191 ..     103     192 .. 0.88

  Alignments for each domain:
  == domain 1  score: 31.4 bits;  conditional E-value: 4.7e-11
                 HHHHHCCHCHHHCTTT---SS.CTTCS--HHHHHHHHHHHHHHHHHHS----TT-HHHHHHHH CS
     GST_C_2   6 raleqldaaldaleahLadspflfGdqptlaDialapflvrlraagpgfdireaypnlraWle 68 
                 +a+++ ++ l ++e++ +d+ fl G+ pt+aD+a+ ++l+++       d  +++p + ++++
  EPX71689.1 129 DAKKKSFSILTVFERQVKDKEFLVGEDPTIADAAAVAHLYFVLSSVMTKDDLAKFPEIERYYK 191
                 48889999**********************************5554356999*********98 PP

>> GST_C_3  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.1   4.7e-09   1.4e-05      19      85 ..     124     192 ..      97     198 .. 0.80

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 4.7e-09
                 HHHHHHHHHHHHCHHHHHHHHHHCHGTSSSSTTS--HHHHHHHHHHHHHHHH....TCC.CC-HHHHHHHHH CS
     GST_C_3  19 ekkkefleerlpkflkyfekvlkkkgggylvgdklTyADlalfqvldgleea....eal.kkfpklkalyer 85 
                  k++e  +++   +l++fe+ +k   +++lvg+  T+AD a ++ l  + +     + + +kfp++ ++y++
  EPX71689.1 124 PKTEEDAKKKSFSILTVFERQVK--DKEFLVGEDPTIADAAAVAHLYFVLSSvmtkD-DlAKFPEIERYYKN 192
                 45555666666779*********..899************99998888888887634.369******99986 PP

>> GST_C_6  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.0   8.2e-08   0.00025      11      49 ..     144     182 ..     136     197 .. 0.74

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 8.2e-08
     GST_C_6  11 lLgdkkyFfGdkPtslDAlvFGhlaqilytplespelre 49 
                   +dk+++ G++Pt +DA++ +hl+++l   +   +l++
  EPX71689.1 144 QVKDKEFLVGEDPTIADAAAVAHLYFVLSSVMTKDDLAK 182
                 5689******88***************887554443433 PP

>> GST_N_3  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   2.2e-06    0.0066       2      68 ..       7      75 ..       6      80 .. 0.88

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 2.2e-06
                ES-TTSHHHHHHHHHHHHHT--EE.EE---TTTTHHHHHHH-TT--SSEEE.TTS-EEESHHHHHHHHH CS
     GST_N_3  2 ygfpaSpyarrvrlaLnekglpve.vvevtpgehdeellaknplgkvPvLe.ddgealtdSlaIidyLe 68
                yg+  Sp +  v  +  ++gl ve   +  pg  + +l  k p +k+Pv++  dg+ l+ SlaI+ y+ 
  EPX71689.1  7 YGSVKSPRVGMVLSTAAMLGLGVEnASNSLPGAFPKHLADKFPIQKIPVFVgADGTCLWQSLAIASYFA 75
                88889999999999********99456666777799999999********9889*************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       327  (0.0182386); expected 358.6 (0.02)
Passed bias filter:                      311  (0.0173462); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1598.85
//
Query:       EPX71690.1  [L=491]
Description: aromatic amino acid aminotransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.2e-18   66.0   0.0    4.4e-18   65.6   0.0    1.1  1  Aminotran_1_2    Aminotransferase class I and II
     0.0019   17.0   0.0      0.006   15.4   0.0    1.7  2  Aminotran_MocR   Alanine-glyoxylate amino-transferase
  ------ inclusion threshold ------
       0.13   11.5   0.0       0.19   11.0   0.0    1.2  1  Beta_elim_lyase  Beta-eliminating lyase


Domain annotation for each model (and alignments):
>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.6   0.0   7.4e-22   4.4e-18      32     330 ..      95     435 ..      80     460 .. 0.88

  Alignments for each domain:
  == domain 1  score: 65.6 bits;  conditional E-value: 7.4e-22
                    HHHTSTTST-BTTHHHHHHHHHHHHHCTCTTCHTTGGEGEEEESHHHHHHHHHHHHHHHTTT-EEEEEESS-THHHHHHHHTTSEEEEEEBEETTT CS
  Aminotran_1_2  32 laggtlneygpidglpeleealakflgrseklklkreaavvvgsGagaliealifllklnpgdeilvpdptyasyknilrlsggevvryplyseed 127
                    l+++++ +yg ++g pel + + k +   +  ++k    + +++G + ++e + +ll ++ g+ il+ + ty+  +++    g++++++ ++   +
     EPX71690.1  95 LDFEGALQYGQCQGIPELVKFIKKHVELAHSPPYKEW-DIKLTNGNTIGLEYCVRLL-VDYGESILIEKYTYPAAITAMAPLGVKFISIDMD---E 185
                    6889999************999999995555566666.888****************.9*******************************55...7 PP

                    TEE-HHHHHHHHTTHHCTTE..TEEEEEEESS-TTT--B--HHHHHHHHHHHHHTTEEEEEEETTTTCBSSSSHTHHH.................. CS
  Aminotran_1_2 128 fhldlealeealkeapegnk..ktkvilvesphNPtGtvatleeleklldlakkynlllfvDeaYagfvfgsldavat.................. 203
                     ++  ++lee lk+  + +   ++ +  + + +NPtG+ ++ +  +k+++la+ky ++++ De Y  + ++++ a++                   
     EPX71690.1 186 NGMIPQSLEEVLKKWDYSKGpmPRILYTIPTGQNPTGSTLSIDRKKKIMALARKYDIIIIEDEPYYFLQMDACNATTSeaqielqdaaensailss 281
                    79999*********8887776566666777889**************************************99765558999************** PP

                    ........HGGSTTSTTEEEEEESSSTTSSGGG-EEEEEEEHHHHHHHHHHHHHHTS..SHHHHHHHHHHHHHHHHHHH..HHHHHHHHHHHHHHH CS
  Aminotran_1_2 204 ........ranveeepnllivgslsKafGlaGeRvGyilgnaavvsqlrklsrpfls..ssllqaavaaalsdallkqs..eleemrqrlqkrrke 287
                             +n+++e  +l   s+sK   ++G R+G+i+gn+ +++ +++++   +   s + q ++  +l++ +++    +l e + ++ +rr  
     EPX71690.1 282 fvnrlvpsFLNLDTEGRVLRIDSFSKLI-APGSRLGWITGNPLFIDRITRAAEVSTEspSGISQIVLFGILNHWKQEGFflWLRELQHTYTNRRNA 376
                    *****988888888888*********65.7************999999999998777888888888889999988766699*************** PP

                    HHHHHHHS....TEEEECCSCSSEEEEEETHH.............CHHHHHHHHHHTCTE CS
  Aminotran_1_2 288 lrdeLael....glkvlasqsgmflltdlsae.............takelskkLleevgv 330
                    l ++ ++       ++ a+++g+fl+ +l+++              + +++++Ll++ gv
     EPX71690.1 377 LLQSADKYlpksICSYRAPKAGLFLWIELDKSrylfddqnkpvseIELDIFQALLQK-GV 435
                    ****9887999788899999***********98888877777776667777777777.55 PP

>> Aminotran_MocR  Alanine-glyoxylate amino-transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0     1e-06     0.006     139     218 ..     169     252 ..     154     279 .. 0.79
   2 ?   -1.5   0.0      0.14   8.3e+02     251     347 ..     306     403 ..     293     479 .. 0.55

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1e-06
                     HHHHHHT-EEEEEEEETTEE-HHHHHHHHHC-TTEEE.....EEE-SSS-TTT-----HHHHHHHHT---SSTT-EEEEE-TTSS CS
  Aminotran_MocR 139 llleelGielltvdlqddGpdvdaveklvaedasvkG.....ilavpkysnptGetiseevarrlaalkaaapdfrifaddayav 218
                       +  lG++++++d++++G   +++e++  +    kG     ++++p+  nptG+t+s ++ +++ al     d  i  d+ y  
      EPX71690.1 169 TAMAPLGVKFISIDMDENGMIPQSLEEVLKKWDYSKGpmpriLYTIPTGQNPTGSTLSIDRKKKIMALA-RKYDIIIIEDEPYYF 252
                     556679*************99999998877755556554444789********************9995.567888999988865 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.14
                     TTTS-TTSS-EEEEE-HHHHHHHHHHHHHC-S---HHHHHHHHHHHHHST..HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSEEE---SBSS CS
  Aminotran_MocR 251 skitfaGaGvafvassedniawlkkylGlqsiGpdkveqlrhvkflkdye..GlealmrdhaeliapkfeavlevleaelggaevatwteprGGy 343
                     sk+   G+ ++ ++  +  i  +++   + +  p  + q+     l++ +  G+   +r+ ++  + + +a+l+  ++ l  + + +++ p+ G 
      EPX71690.1 306 SKLIAPGSRLGWITGNPLFIDRITRAAEVSTESPSGISQIVLFGILNHWKqeGFFLWLRELQHTYTNRRNALLQSADKYL-PKSICSYRAPKAGL 399
                     55555555555555555555555555555555555555555555555443335555555555555555555555544444.45677777777777 PP

                     -EEE CS
  Aminotran_MocR 344 fisl 347
                     f+ +
      EPX71690.1 400 FLWI 403
                     6432 PP

>> Beta_elim_lyase  Beta-eliminating lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   3.2e-05      0.19      94     165 ..     174     245 ..     137     258 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 3.2e-05
                      C--EEEEE-EBTTTBE-HHHHHHHS--S-T.TS-EEEEEEEESSBTTTTTB---HHHHHHHHHHHHHCT-EEE CS
  Beta_elim_lyase  94 agvklrdlknkeaGkmdlekleaaikevga.heekiklisltvTnntagGqvvsleelrevaaiakkygiplh 165
                       gvk++ ++ +e + m +++le+++k+ +    + ++++++  T +   G  +s++  +++ a+a+ky+i ++
       EPX71690.1 174 LGVKFISIDMDE-NGMIPQSLEEVLKKWDYsKGPMPRILYTIPTGQNPTGSTLSIDRKKKIMALARKYDIIII 245
                      589999999999.8899*********9777666778888888899999*********************9766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (491 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       351  (0.0195772); expected 358.6 (0.02)
Passed bias filter:                      347  (0.0193541); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 3552.20
//
Query:       EPX71691.1  [L=406]
Description: alpha-ketoglutarate-dependent sulfonate dioxygenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.1e-48  163.5   1.0    1.1e-47  163.1   1.0    1.1  1  TauD       Taurine catabolism dioxygenase TauD, TfdA family
  ------ inclusion threshold ------
      0.026   14.6   0.0      0.053   13.6   0.0    1.4  1  ProRS-C_2  Prolyl-tRNA synthetase, C-terminal
       0.14   11.0   0.2       0.24   10.3   0.2    1.2  1  DUF3375    Protein of unknown function (DUF3375)


Domain annotation for each model (and alignments):
>> TauD  Taurine catabolism dioxygenase TauD, TfdA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.1   1.0   1.8e-51   1.1e-47       2     267 ..     117     384 ..     116     384 .. 0.91

  Alignments for each domain:
  == domain 1  score: 163.1 bits;  conditional E-value: 1.8e-51
        TauD   2 vkpltpkfgae..gvdlsdleslddelkeelrellaeygvvvfrgf.plspeqqlefarrfG..plygtpgrgtntkygevld.vssvyesadianlay 94 
                 v++l++++g+   g+ l++   l+d++k el +l+ae+gvv f+ + +l++++++++ r+ G   ++g + r++ +     ++ +s++y+  di +  +
  EPX71691.1 117 VEHLSRDLGTVlhGLRLNQ---LNDAQKNELARLIAERGVVYFPHQeELTNDEFQQLGRYYGvtHVHGANARPNDPAKSDFHVvYSDRYTAFDIEDNRT 212
                 6778888888866666666...88999******************9566************988666666666666666666688899********999 PP

        TauD  95 ttllwHtDlsylesppgiqlLhcleapatGGetpfvDgraaynaLpeelpellegltavrvyyhyrggglrteqelpavdkhprtghpvvrthpvltgr 193
                 +  ++H+D sy+ +p  +++++ l++p+ GG+t fv+g+aay+aL++ l+  legltav++  ++ +   ++e  l  +++  +t hp+vrthpv tg+
  EPX71691.1 213 NLERFHSDVSYEKQPLATTFFRGLTVPEYGGDTVFVSGYAAYEALSDPLKHYLEGLTAVHSGVQQAK--AKKELGLNLRREGIETAHPIVRTHPV-TGW 308
                 9999************************************************************999..99***********************8.*** PP

        TauD 194 kallvnppfatrieglgtpeskelldaleelled.peftyrfqwqeGdlvifdNrrvl.Hgrt.afdegeeRhllrc 267
                 kal+vnp f+++i+g + +es+++l +l+ell    + t+r++w +  ++ +dNr +l H++t ++ +   Rh+lr+
  EPX71691.1 309 KALYVNPGFTRYIVGIPRAESDAILGYLFELLSTlSASTIRVRWSPYGVAAWDNRIILaHSATyDHYPQ-TRHFLRI 384
                 **********************************77*******************9755*****76466.9***995 PP

>> ProRS-C_2  Prolyl-tRNA synthetase, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   8.9e-06     0.053       3      41 ..     127     168 ..     126     172 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 8.9e-06
                 E-SS--....HHHHHHHC...TTT-SEEEEE--GGG-SHHHH CS
   ProRS-C_2   3 iLeaenvnlllenikekl...sekkGvvLvPfneeiYneefe 41 
                 +L     n l +  k+ l     ++Gvv  P++ee+ n+ef 
  EPX71691.1 127 VLHGLRLNQLNDAQKNELarlIAERGVVYFPHQEELTNDEFQ 168
                 566666677777777765111579*****************7 PP

>> DUF3375  Protein of unknown function (DUF3375)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.2   3.9e-05      0.24     238     281 ..     106     149 ..     105     151 .. 0.95

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 3.9e-05
     DUF3375 238 aFwdlLldperqaeldealdavlarpaareLeaeerreLrrllr 281
                 +F +lL+d  + ++l+ +l +vl    +++L++++++eL rl +
  EPX71691.1 106 SFSNLLRDVTKVEHLSRDLGTVLHGLRLNQLNDAQKNELARLIA 149
                 699*************************************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (406 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       391  (0.0218082); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 3143.17
//
Query:       EPX71692.1  [L=561]
Description: arylsulfatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.3e-75  252.7   0.0    6.4e-75  252.4   0.0    1.1  1  Sulfatase     Sulfatase
    6.2e-05   22.8   0.4      0.082   12.5   0.2    2.4  2  Phosphodiest  Type I phosphodiesterase / nucleotide pyrophosp
      0.002   16.8   0.0     0.0029   16.3   0.0    1.3  1  DUF229        Protein of unknown function (DUF229)
     0.0027   17.6   0.0     0.0057   16.6   0.0    1.4  1  DUF4994       Domain of unknown function
  ------ inclusion threshold ------
       0.16   12.4   0.5       0.84   10.0   0.1    2.1  2  DUF5063       Domain of unknown function (DUF5063)


Domain annotation for each model (and alignments):
>> Sulfatase  Sulfatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  252.4   0.0   1.8e-78   6.4e-75       1     309 []       5     435 ..       5     435 .. 0.95

  Alignments for each domain:
  == domain 1  score: 252.4 bits;  conditional E-value: 1.8e-78
                 EEEEEEEESSE-TTGSGGGTTTSCSSHHHHHHHHTSEEESSEE-SSSSHHHHHHHHHHSS-HHHHTHSSCCSTTT............HHCTTTS-HHHH CS
   Sulfatase   1 pnvvliladdlgagdlglyggktattpnldrlaeeglrftnfysaaplcspsraalltgryphnsgvasntevgg............gglpqteatLpe 87 
                 pn+++i+addlg++d+g++g +++ tpnld+la+eglrft+f++a+ +csp+r++ll+g ++h +g +++ e++             g l+ ++a+Lpe
  EPX71692.1   5 PNFLIIVADDLGWSDVGAFGSEIN-TPNLDALAKEGLRFTDFHTAS-ACSPTRSMLLSGTDNHLAGLGQMAEFASrihqwddypgyeGYLNWRVAALPE 101
                 9**********************9.9*****************997.**************************************************** PP

                 HHHHTT-EEEEEEES-SCCSGGGSHHCCTTTSEEEETSSSCHHTCCCCCCCCCECTCCC.......................TTTTCSHHHHHHHHHHH CS
   Sulfatase  88 llkeaGYntaaigkwhlgwssrqsvyknrgfdrflgfptgsaalkdpekseyngevlrv.......................ppeggysddrlldeale 163
                 +lke+ Y+t + gkwhlg+++++s+  +rgf+++++  +g+ ++ + +k ++    +++                        pe +ys+d ++ +++e
  EPX71692.1 102 VLKEK-YDTIISGKWHLGLTKETSP-FARGFNKVFSLLPGAGHHFKDYKPSDEKHKENSddlakllpalymsgsefidadkeLPEDFYSSDYFASKLQE 198
                 *****.*****************93.489****99988777666555555554444444689************************************* PP

                 HH....HCCCTSSEEEEEEE-TTSSSTCTCGGHTCCGSTTTTCCCCCCH............................................HHHHHH CS
   Sulfatase 164 fl....larndkpfflylatlapHappeapdeyakkyatffddgseaar............................................qlleay 214
                  l    +  +dkpff+yl + apH+p++ap+   kky++++ +g++a r                                            +++e+y
  EPX71692.1 199 SLdehyKMDKDKPFFAYLPFTAPHWPLQAPRHLIKKYKGKYSEGPDALRisrlkkqealgvyttardgppsevytdeeknwsdmseeerkvssRTMEVY 297
                 *****88888*************************************99999999999***************************************** PP

                 HHHHHHHHHHHHHHHHHHHHTTTGGGEEEEEEESSSSCCCG............................................HHTTSSSCTTCSSS CS
   Sulfatase 215 lnsveyvDdligrvlaaLeenglldntlvvftSDhgaslee............................................sngplrggkganay 269
                 +++ve+ D+++g+++++L+e+g++dnt+v+f+SD+ga  e+                                            +++p r+ k    +
  EPX71692.1 298 AAMVERLDWNVGKIVQYLKEKGEYDNTFVLFMSDNGA--EGailenkpmsggnvtevirkrydnslenlgnrnsfiwygprwalaATAPSRDCKF-YIS 393
                 *************************************..555799***************************************99999999999.*** PP

                 HHHHBEEEEEEETTTSHC..EEECSEEEGGGHHHHHHHHTTE CS
   Sulfatase 270 eggtrvPllvwwpgekap..rvseelvshiDlfptildlagi 309
                 egg+r Pl+v++p+++++   +s+ +++++D++pt+l+lagi
  EPX71692.1 394 EGGIRCPLIVRFPQIIKNpgSISHDFTTVMDITPTVLELAGI 435
                 ****************************************97 PP

>> Phosphodiest  Type I phosphodiesterase / nucleotide pyrophosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0   0.00045       1.6       2      45 ..       8      54 ..       7      60 .. 0.86
   2 !   12.5   0.2   2.3e-05     0.082     196     237 ..     285     337 ..     162     388 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00045
                  EEEEETT-BTTHHHHHG.S.TSHHHHHHHHHSEEESE.EE-SSS-SH CS
  Phosphodiest  2 lvislDGlradlldrla.e.llpnlaaLakegvsapn.lrpvfPtlT 45
                  l+i+ D l ++ + ++  e  +pnl+aLakeg++++  +++++ + T
    EPX71692.1  8 LIIVADDLGWSDVGAFGsEiNTPNLDALAKEGLRFTDfHTASACSPT 54
                  78999***********999****************997877766555 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 2.3e-05
                   H...........HHHHHHHHHHHHHHHHHHHHHTTGTTTEEEEEEES---EEE CS
  Phosphodiest 196 e...........vedalrrvDkaigdLlealderglsaetniilvSDHGmadv 237
                   e            ++ ++r+D ++g+++++l+e+g +++t ++ +SD G++  
    EPX71692.1 285 EerkvssrtmevYAAMVERLDWNVGKIVQYLKEKGEYDNTFVLFMSDNGAEGA 337
                   15555555555577899********************************9766 PP

>> DUF229  Protein of unknown function (DUF229)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   8.1e-07    0.0029     306     344 ..     296     348 ..     287     436 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 8.1e-07
      DUF229 306 dkfnllealDedllkylkklekkgllentlvlllsDHG..............l 344
                  + +++e+lD+++ k+ + l++kg  +nt+vl++sD G              +
  EPX71692.1 296 VYAAMVERLDWNVGKIVQYLKEKGEYDNTFVLFMSDNGaegailenkpmsggN 348
                 567899******************************99555555555555552 PP

>> DUF4994  Domain of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.6e-06    0.0057      37      95 ..     482     543 ..     477     545 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.6e-06
     DUF4994  37 svrkkkWk..yiePskgpalikl.tkielGnskepqLydlkkdegekenvaekhpekvkelk 95 
                 ++r++ Wk  y+  s++ ++ +   +  lG +++ +Ly++k+d++e++++  ++p++++el 
  EPX71692.1 482 AIRRGPWKaiYVPVSNAFSFLTEkFRSGLGGDSKWRLYNVKEDRAESKDLSLERPDILQELV 543
                 79999**944444455555544447788999****************************995 PP

>> DUF5063  Domain of unknown function (DUF5063)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.1   0.00023      0.84      27      82 ..     152     200 ..     146     208 .. 0.69
   2 ?   -0.3   0.0      0.35   1.2e+03      70     109 ..     303     340 ..     279     341 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00023
     DUF5063  27 serkefvdeiaklLplLylkasllpeaerle.edveleerveEedyealrealarlL 82 
                 ++ ke  d++aklLp Ly+  s   +a+++  ed++  +++         ++l++ L
  EPX71692.1 152 EKHKENSDDLAKLLPALYMSGSEFIDADKELpEDFYSSDYFA--------SKLQESL 200
                 46788899*******************333235555555554........3333333 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.35
     DUF5063  70 dyealrealarlLgekddYlevfdpdmkysdtpiaasise 109
                  ++    ++ + L+ek +Y  +f   m  sd+ ++++i e
  EPX71692.1 303 RLDWNVGKIVQYLKEKGEYDNTFVLFM--SDNGAEGAILE 340
                 55666778999999999**99999999..88888877766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (561 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       393  (0.0219198); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.41
# Mc/sec: 4156.54
//
Query:       EPX71693.1  [L=349]
Description: alcohol dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.6e-24   84.2   0.3    1.2e-23   83.5   0.3    1.3  1  ADH_zinc_N     Zinc-binding dehydrogenase
    1.5e-17   64.9   0.0    2.7e-17   64.1   0.0    1.4  1  ADH_zinc_N_2   Zinc-binding dehydrogenase
    4.3e-12   45.9   0.0    1.9e-11   43.8   0.0    2.2  2  ADH_N          Alcohol dehydrogenase GroES-like domain
  ------ inclusion threshold ------
      0.025   13.9   0.2       0.04   13.2   0.2    1.3  1  AlaDh_PNT_C    Alanine dehydrogenase/PNT, C-terminal domain
      0.044   14.2   0.1       0.07   13.6   0.1    1.4  1  NAD_binding_7  Putative NAD(P)-binding


Domain annotation for each model (and alignments):
>> ADH_zinc_N  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.5   0.3   3.3e-27   1.2e-23       1     127 [.     176     306 ..     176     309 .. 0.91

  Alignments for each domain:
  == domain 1  score: 83.5 bits;  conditional E-value: 3.3e-27
                 HHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTESEEEETTTC.HHHHHHHHHTTTSSEEEEEESSCSHHHHHHHHHCEEEEEEEEECSC.TSSEEE. CS
  ADH_zinc_N   1 gvGlaavqlAkalGaeviavdsseeklelakklGadevinykea.dlverikeltggegvdvvfecvGsgatleaalkllkpgGrlvvvGg.gkgeee. 96 
                 gv ++a+q+A a Ga+v++++ss+ekl++akklGa+ +iny++  ++ +   e t+  g++ v+e+ G ++tl ++l++++ +G ++ +G+  k++++ 
  EPX71693.1 176 GVSIFALQFAVATGARVTVISSSDEKLQIAKKLGATNLINYRTNpEWAKPALEVTENVGYHHVVEVGG-EKTLGQSLEVATVNGVITSIGFvAKQGNSp 273
                 899**************************************9999***********************.**********************95555555 PP

                 ...EEHHHHHHTT-EEEEE-SSCHHHHHHHHHHH CS
  ADH_zinc_N  97 ...fdlrnlllkeksilGsllgslreefkealdl 127
                      +++ll k+++i+G+ +g   + f e+++ 
  EPX71693.1 274 ditSMIAQLLNKNIHIRGVYVGP-VRMFTEMIAC 306
                 8777778899***********99.6777777765 PP

>> ADH_zinc_N_2  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.1   0.0   7.6e-21   2.7e-17       1     133 []     208     343 ..     208     343 .. 0.85

  Alignments for each domain:
  == domain 1  score: 64.1 bits;  conditional E-value: 7.6e-21
                   TT-SEEEETT.STTHH....HHH-TT-EEEEEES-HHHHH.HHHHHHEEEEEEEEE----.....S-EEE-CHHHCTTT-EEEE--GGG...-.-HH CS
  ADH_zinc_N_2   1 lGAdevidyr.tedfe....aatggegvDvvldtvggealleaslkvlpggGrlvsiggpp....lsaallkpakkrkgrsvkyeflfsmkasaqad 88 
                   lGA+  i+yr +++++    ++t++ g+ +v++  gge++l +sl+v   +G + sig        ++ +++ a+   ++++++  +  + +   ++
    EPX71693.1 208 LGATNLINYRtNPEWAkpalEVTENVGYHHVVEV-GGEKTLGQSLEVATVNGVITSIGFVAkqgnSPDITSMIAQ-LLNKNIHIRGVY-VGPV--RM 299
                   8*******************9**9*********6.767777*******888***999964457765555555555.556677777776.5554..55 PP

                   HHHHHHHHHHHHH----EEEEEEGGGHHHHHHHHHSS--SSEEEE CS
  ADH_zinc_N_2  89 ileelaalieeGklrpvvdrvfpleeaaeAhrylesgrarGKiVl 133
                    ++e+ a ie+++++pvvd+vfp+ +++eA+ y +s +++GK+Vl
    EPX71693.1 300 -FTEMIACIEANNIHPVVDKVFPFGQLKEAYTYQQSQQHVGKVVL 343
                   .*******************************************8 PP

>> ADH_N  Alcohol dehydrogenase GroES-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.8   0.0   5.3e-15   1.9e-11       1      65 [.      30      94 ..      30     132 .. 0.88
   2 ?   -2.2   0.0       1.1   3.8e+03      47      63 ..     157     173 ..     155     176 .. 0.80

  Alignments for each domain:
  == domain 1  score: 43.8 bits;  conditional E-value: 5.3e-15
                TTEEEEEEEEEEE-HHHHHHHTTSTTTTSSSSEE---EEEEEEEEESTT-CS--TT-EEEE-SEE CS
       ADH_N  1 pgevlikvkaagiCgsDlhilkggkelevklplilGHEivGeveevgpevkklkvGdrVvvepli 65
                p+ev +k+kaa+++  Dl i++g      +lp+++G + vG+ve+vg++vk+l++Gd V+ ++++
  EPX71693.1 30 PNEVQVKLKAASLNYRDLTIANGVYPQAYNLPVVPGSDGVGIVEKVGEDVKGLNIGDTVLGNFFT 94
                689********************999*********************************998765 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1.1
                 STT-CS--TT-EEEE-S CS
       ADH_N  47 gpevkklkvGdrVvvep 63 
                 g++ ++lk G++V+++ 
  EPX71693.1 157 GSNEHQLKPGQNVLIQG 173
                 6677889******9975 PP

>> AlaDh_PNT_C  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.2   1.1e-05      0.04      30      77 ..     168     215 ..     158     269 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.1e-05
                  EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTCECEE CS
  AlaDh_PNT_C  30 kvlviGgGvaGlqAiatakglgakVtvlDvrparleqleslgakfvev 77 
                  +vl+ G G + + A++ a++ ga+Vtv+  + ++l+  ++lga+ +  
   EPX71693.1 168 NVLIQGTGGVSIFALQFAVATGARVTVISSSDEKLQIAKKLGATNLIN 215
                  699***********************************9999985544 PP

>> NAD_binding_7  Putative NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   1.9e-05      0.07       7      46 ..     166     209 ..     161     285 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.9e-05
  NAD_binding_7   7 gkkvlvvGgGevAarkvrklleagakvtvvapevkeele.....e 46 
                    g++vl+ G G v    ++  +++ga+vtv++    e+l+     +
     EPX71693.1 166 GQNVLIQGTGGVSIFALQFAVATGARVTVISSSD-EKLQiakklG 209
                    689****************************993.3333444441 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (349 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       352  (0.019633); expected 358.6 (0.02)
Passed bias filter:                      296  (0.0165096); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2646.39
//
Query:       EPX71694.1  [L=143]
Description: hsp16-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.7e-21   74.3   0.8      8e-21   74.1   0.8    1.1  1  HSP20       Hsp20/alpha crystallin family
    2.1e-12   46.4   0.0    3.6e-12   45.7   0.0    1.4  1  ArsA_HSP20  HSP20-like domain found in ArsA
     0.0023   18.9   0.3     0.0072   17.3   0.3    1.8  1  CS          CS domain
     0.0081   16.5   0.0      0.011   16.2   0.0    1.3  1  PIH1_CS     PIH1 CS-like domain
  ------ inclusion threshold ------
       0.13   12.5   0.0       0.14   12.4   0.0    1.2  1  Cohesin     Cohesin domain
       0.15   12.1   0.2         25    5.1   0.0    2.2  2  FKBP26_C    FKBP26_C-terminal


Domain annotation for each model (and alignments):
>> HSP20  Hsp20/alpha crystallin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.1   0.8   2.7e-24     8e-21       1     101 [.      40     142 ..      40     143 .] 0.91

  Alignments for each domain:
  == domain 1  score: 74.1 bits;  conditional E-value: 2.7e-24
                 E--SSEEEEEEEEE-TT--CCCEEEEEETTEEEEEEE--......---TT----SS---EEEEEE--STTB-TTT-EEEEETTEEEEEEEBSS--..-- CS
       HSP20   1 dikeeeeefevkldvpglkkeelkvkvednrvlvkgehe....eeeedekglikerssrkFsrkftLPenvdadkvkaslkdGvLtvtvpkkepekkkk 95 
                 d++e ++  ev +++pg+kk++++v++++++++++ge      +e ++++  ++er+ ++Fsr++t+P+ vdad+++a+++ G+L++ +pk e+   ++
  EPX71694.1  40 DVHEGKDTVEVDVELPGVKKQDVQVHYDEGKLTISGESVnerkSESDKGNQRWSERRFGSFSRTITIPNRVDADRIEAQFNHGILSIVLPKIEES--RS 136
                 67899*******************************98866656666778899**************************************9999..67 PP

                 ------ CS
       HSP20  96 erkiqi 101
                  ++i+i
  EPX71694.1 137 RKQIAI 142
                 888877 PP

>> ArsA_HSP20  HSP20-like domain found in ArsA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.7   0.0   1.2e-15   3.6e-12       2      62 ..      46     127 ..      45     128 .. 0.97

  Alignments for each domain:
  == domain 1  score: 45.7 bits;  conditional E-value: 1.2e-15
  ArsA_HSP20   2 deyvlkldLPfvdkeeidlsrsgdeLtIkig......................nfrRqitLPsvlarkevtsAkfedgvLeIr 62 
                 d ++++++LP+v+k++++++ ++  LtI+ +                      +f+R+it P++++++++  A+f+ g L I 
  EPX71694.1  46 DTVEVDVELPGVKKQDVQVHYDEGKLTISGEsvnerksesdkgnqrwserrfgSFSRTITIPNRVDADRI-EAQFNHGILSIV 127
                 7899******************************************************************.**********97 PP

>> CS  CS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.3   2.4e-06    0.0072       6      76 .]      42     130 ..      37     130 .. 0.77

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 2.4e-06
                 EEETTEEEEEEE-TTCTTTTTCEEEEEETTEEEEEE...TS.CEEEEECE................BSS-BETTTEEEEEETTEEEEEEEB CS
          CS   6 yQtldeVvvtiyvkkvnikkkdvkvefkerslkvki...gk.eklliege................LfgpIdpeesswtieskkveitLkK 76 
                 ++ +d+V+v +++++v  kk+dv+v+  e +l+++    ++ +++ ++g+                  + +d +     +    + i+L K
  EPX71694.1  42 HEGKDTVEVDVELPGV--KKQDVQVHYDEGKLTISGesvNErKSESDKGNqrwserrfgsfsrtitIPNRVDADRIEAQFNHGILSIVLPK 130
                 67789**********9..*************999986665556666666588888888887777777777777777777777777777766 PP

>> PIH1_CS  PIH1 CS-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   3.6e-06     0.011      32      87 ..      47     121 ..      19     130 .. 0.87

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 3.6e-06
     PIH1_CS  32 elaieielPllksikevklrvgerrlel....................eskk.akyfLslkLpYpvdedkveAkFvk 87 
                 +  +++elP++   ++v+++++e +l +                    e ++  ++  ++++p +vd d++eA+F++
  EPX71694.1  47 TVEVDVELPGV-KKQDVQVHYDEGKLTIsgesvnerksesdkgnqrwsE-RRfGSFSRTITIPNRVDADRIEAQFNH 121
                 56799******.6799999999999999***************999744.336999999****************97 PP

>> Cohesin  Cohesin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   4.8e-05      0.14      14      57 ..      46      82 ..      39     131 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 4.8e-05
                SEEEEEEEEESECTTEEEEEEEEEE.TTTEEEEEEEE-TTS.SSG CS
     Cohesin 14 dtvtvpvtvsnvskkvaaaqftikYDpavlevvsvkaGsiv.kns 57
                dtv+v v++ +v+k    ++++++YD  +l+++    G+ v + +
  EPX71694.1 46 DTVEVDVELPGVKK----QDVQVHYDEGKLTIS----GESVnERK 82
                89************....***************....55443222 PP

>> FKBP26_C  FKBP26_C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0    0.0083        25      10      32 ..      51      73 ..      44      76 .. 0.86
   2 ?    5.0   0.0    0.0086        26      15      37 ..     109     131 ..     102     133 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0083
                HHH-TT--..--EEEEETTEEEE CS
    FKBP26_C 10 kryiPnidlekfkieiedktvtI 32
                 + +P ++++++++ ++++++tI
  EPX71694.1 51 DVELPGVKKQDVQVHYDEGKLTI 73
                4557*****************99 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.0086
                 T--..--EEEEETTEEEEE--TT CS
    FKBP26_C  15 nidlekfkieiedktvtIelpee 37 
                 ++d++ ++ +++ ++++I lp+ 
  EPX71694.1 109 RVDADRIEAQFNHGILSIVLPKI 131
                 69*******************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       388  (0.0216409); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.41u 0.27s 00:00:00.68 Elapsed: 00:00:00.43
# Mc/sec: 995.74
//
Query:       EPX71695.1  [L=160]
Description: But2 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       336  (0.0187406); expected 358.6 (0.02)
Passed bias filter:                      274  (0.0152825); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1207.99
//
Query:       EPX71696.1  [L=456]
Description: drug resistance protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-33  115.7  47.1    2.2e-33  115.7  47.1    2.6  2  MFS_1     Major Facilitator Superfamily
  ------ inclusion threshold ------
       0.46   10.1   4.7        1.7    8.2   4.7    2.0  1  DUF4044   Protein of unknown function (DUF4044)


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.7  47.1   2.4e-37   2.2e-33      17     352 ..       9     401 ..       1     402 [. 0.85
   2 ?   -2.1   0.2      0.15   1.4e+03     310     320 ..     431     442 ..     419     455 .. 0.40

  Alignments for each domain:
  == domain 1  score: 115.7 bits;  conditional E-value: 2.4e-37
       MFS_1  17 palpl.alaedlg.ispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfa..sslw.lllvlrvlqGlgagalfpagaali 110
                 +++pl +++++lg  +++++++  + ++l+ + ++l++Gr++d fG++ ++++g+++f++++l+  f+  + ++ ++ v+r+l+G++ ++l+p+g+a++
  EPX71696.1   9 TIAPLhIVGKSLGtTNEAQLSWFPASFSLTVGTFILIAGRIGDIFGHKAMFVCGYAWFSIWSLVSGFSvyAKSPiMFDVCRALTGIAPAVLLPNGLAIL 107
                 5678888899999677888******************************************77777866899999************************ PP

       MFS_1 111 adwfpk.eergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpeepperkrkspkeee.................... 188
                  + + + +++  ++ +++a++  G++lg+++++++a++ +W+++++   i+++ +++    ++  +  ++++ ++ + e                    
  EPX71696.1 108 GRAYQPgRRKQIVFCCFGATAPSGYLLGAVFSSIFAQLSWWPWAYWSTSIICCAFCLA--SFIIIPSFKEEKRNEDKNEcagkkefdyagsffgvagli 204
                 ******88888899*****************************************774..88877777777777766668888999***********99 PP

       MFS_1 189 ....................................kgtgpaplvpawkallkdpvl....w.....illialllfffgfsglltllplylqevlglsg 242
                                                     +            + +++p l    +     ++l++++ ++++fs+  +++  +l   ++ s 
  EPX71696.1 205 linfawnqapvvgwhvpyvyilliigflcfsiflyiE------------HKVSQPILppdiLtgetgLVLLCVAAGWCCFSIWIYYFWNFLEVLRNQS- 290
                 9997777777777777666665554444444444443............44444444333314455557777777788****9999999989999999. PP

       MFS_1 243 lllaglllallalvgailallagrlsdrlgrrrrlllallllllaalglallavtssavllll.vlvliGfglgfvfpsllalasdlappeeagtasgl 340
                  ll+++  + +++ g  +a ++g ++  + + + +++a+++++++++++a ++  +s+++  + ++++  fg+ + fp+++  +sd++++e++g a++l
  EPX71696.1 291 PLLTSGQWSPVSVSGTLAAAITGVILSWVRPIFVMIIAMAFFTAGSILIATAPIHQSYWAQTFvSIAITPFGMDMSFPAATLTISDYVSKENQGIAASL 389
                 688888999999999999**********9999999999999999999999999999999999966777888**************************** PP

       MFS_1 341 fntagslggalg 352
                 ++t+ + ++++g
  EPX71696.1 390 VSTVVNYSISIG 401
                 ******999998 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.15
       MFS_1 310 iGf.glgfvfps 320
                 iGf glg+  +s
  EPX71696.1 431 IGFgGLGILISS 442
                 222222222222 PP

>> DUF4044  Protein of unknown function (DUF4044)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   4.7   0.00019       1.7      14      30 ..     324     340 ..     322     341 .. 0.93

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00019
     DUF4044  14 vvvwlMliaTVGSvllg 30 
                 v+++ M+++T GS+l++
  EPX71696.1 324 VMIIAMAFFTAGSILIA 340
                 9**************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (456 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       767  (0.0427799); expected 358.6 (0.02)
Passed bias filter:                      298  (0.0166211); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.24s 00:00:00.82 Elapsed: 00:00:00.40
# Mc/sec: 3379.30
//
Query:       EPX71697.1  [L=117]
Description: hypothetical protein SOCG_01911 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.9e-08   34.0   0.1    4.8e-08   33.6   0.1    1.1  1  GPI-anchored  Ser-Thr-rich glycosyl-phosphatidyl-inositol-anc


Domain annotation for each model (and alignments):
>> GPI-anchored  Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.6   0.1   2.7e-12   4.8e-08       2      91 ..      23     110 ..      22     112 .. 0.93

  Alignments for each domain:
  == domain 1  score: 33.6 bits;  conditional E-value: 2.7e-12
  GPI-anchored   2 sPssgevvtagkpvtitWkdsgtdpgtvtlvLcagssnnlksvktiasgiknsdgsytwtvpaslesggaYflqivsesne.giynySdrF 91 
                   +Ps  e++t  +  t+tW++++tdp   +l+L +      +++ +  s  + sdgsyt +  ++ + +g+Y +++ + +n  +iy++S+ F
    EPX71697.1  23 TPSPFEEWTTCEDHTVTWDSVDTDPRIADLYLSSYIR--YPPINKFLSRLSVSDGSYTADT-KGWPIDGGYRINMRNPDNFdEIYAQSEEF 110
                   6888999*************************99998..899999999************9.8899999*******888888********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       277  (0.0154498); expected 358.6 (0.02)
Passed bias filter:                      256  (0.0142785); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.45
# Mc/sec: 784.05
//
Query:       EPX71698.1  [L=552]
Description: hypothetical protein SOCG_01912 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      7e-08   32.5  10.4    1.8e-07   31.1  10.4    1.7  1  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain
    0.00011   21.4   2.4    0.00044   19.4   0.2    2.3  2  Fungal_trans  Fungal specific transcription factor domain


Domain annotation for each model (and alignments):
>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.1  10.4     2e-11   1.8e-07       1      34 [.      13      44 ..      13      47 .. 0.94

  Alignments for each domain:
  == domain 1  score: 31.1 bits;  conditional E-value: 2e-11
                SS-HHHHHCT---STSSSS-HHHHHCTHHHCCCC CS
     Zn_clus  1 haCdnCrkkKvKCdakkPaCsnCkklnleCtfys 34
                +aC  C++kK+KC++ +P Cs C+kl+ +C+ y+
  EPX71698.1 13 KACLVCHRKKRKCSGTFP-CSYCQKLRHKCQ-YE 44
                59****************.************.65 PP

>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.2   4.9e-08   0.00044       2      59 ..     163     220 ..     162     280 .. 0.71
   2 ?    1.6   0.3     0.013   1.1e+02     183     233 ..     279     326 ..     270     394 .. 0.78

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 4.9e-08
  Fungal_trans   2 drffsnfhpqfpilhkpsflpktssenssksayaspllllailalGalfsesetkesn 59 
                   +++f++++p f++l+  sf++k +s+ s++  + +++l+  i+ lG++fs++++  ++
    EPX71698.1 163 SIYFEDVNPIFGLLDATSFFSKLKSTWSTDMEEEFEALVCIIILLGSYFSHTNSLANE 220
                   79*********************9999*************************998873 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.013
  Fungal_trans 183 lpLPcddddlwesddaseetlvetklsneeksrkiasfllaLkkilskiag 233
                   ++++c   dlwe  ++ + t      +n+++s ++ + ++ +++  +k++ 
    EPX71698.1 279 VEIFCANIDLWENQKNYNDTEHT---NNKSQSYLPLYNVIMVSEAFHKFLA 326
                   56889999999988777777776...7999999999999999999999553 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (552 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       731  (0.0407719); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.28s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 3716.44
//
Query:       EPX71699.1  [L=969]
Description: alpha-glucosidase Agl1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   7.7e-144  480.1   7.9   1.1e-143  479.6   7.9    1.2  1  Glyco_hydro_31  Glycosyl hydrolases family 31
    3.8e-30  104.4   0.1    8.1e-30  103.4   0.1    1.6  1  NtCtMGAM_N      N-terminal barrel of NtMGAM and CtMGAM, malta


Domain annotation for each model (and alignments):
>> Glyco_hydro_31  Glycosyl hydrolases family 31
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  479.6   7.9  1.2e-147  1.1e-143       1     440 []     286     841 ..     286     841 .. 0.95

  Alignments for each domain:
  == domain 1  score: 479.6 bits;  conditional E-value: 1.2e-147
                     EEEE-.SSHHHHHHHHHHHH-------GGGGSEEEE-TT--SHHHHHHHHHHHHHTT--EEEEEESCGGSBTTCCTB-.TTTSS.-H.HHHHHHH CS
                     xxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xx.xxxxxxx RF
  Glyco_hydro_31   1 yvflG.ptpkevvkqyteltGrpalpPrwalGfhqsrygykdeeeveevvdkfreagiPldvivlDidymdkrkdftwdkerFp.dp.kemvdel 92 
                     yv++G ++pke +kqy + +G p+++++w+lG+h++r+gy++ +e++ v +++++ +iP+++++ D+dym++ +dft+d++++p d+  ++++e+
      EPX71699.1 286 YVYSGsSSPKETTKQYIKSIGLPQMQQYWTLGYHMCRWGYQNITEIMRVRERMHNSSIPIETFWSDVDYMHNLRDFTVDPTSYPrDQfSQFFHEI 380
                     9****999****************************************************************************9778******* PP

                     HHTT-EEEEEE-SEE.E.-T......TSHHHHHHHHTTSBECCCCCS.TCEC.TSSEEEEB-TTSHHHHHHHHHHHHHHHCT........CT--E CS
                     xxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxx.xxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxx........xxxxx RF
  Glyco_hydro_31  93 hekgvklvvivdpaiskqee......eyeafdegkekgvflknkdgs.ykgk.wpgstafpDftnpearewwkkelkkflld........lgvdg 171
                     +++++++++ivd++++++++      +y +f eg ek++flkn+dgs y+g+ wpg ++fpDf++p+++e+wk+ +++  ++        ++++g
      EPX71699.1 381 ESSHQHYIPIVDAGVYAANPtnrsddTYGPFYEGFEKDLFLKNPDGSiYIGEvWPGFAVFPDFIHPNVQEYWKHGIQNLSYAfgsnssnyIPFSG 475
                     999************9988899999999*******************999999********************888777666889999999**** PP

                     EEE-STTTB.SCCCCHH.HHCCCTS...................................................................... CS
                     xxxxxxxxxxxxxxxxx.xxxxxxx...................................................................... RF
  Glyco_hydro_31 172 lwiDmnepsnfeegsds.eekeake...................................................................... 195
                     lw Dmneps+f+ gs+  e  ++++                                                                      
      EPX71699.1 476 LWLDMNEPSSFCVGSCGsELVNWNPvhppmmlpgessspvfvypnisnpsnttefysaytavlsqyhatattsfqtvhstpgplgdkpninhppy 570
                     *****************77666666********************************************************************** PP

                     ....................CETTCC.HHHHCCCHHHHHHHHHHHHHHHHTTTST-EEEESSEETTGGGCTEEE--S-BSSHHHHHHHHHHHHHH CS
                     ....................xxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_31 196 ....................tkaags.hydvhnlygllmakatyeglkekkpkkrpfiltRstfaGsqryaahWsGdnassWeslresipallsf 269
                                         t+++g+  y++ n+yg+++ k t+++l+e +p +rpfiltRs f+G++ yaa+W+Gdn+s+W ++ +sip++l++
      EPX71699.1 571 ainqeqgnhdlanhgvspnaTHYDGTlRYNLFNVYGYTEGKVTHQALSELQPGRRPFILTRSNFVGTGTYAAVWLGDNHSNWPNMYFSIPGMLTY 665
                     ***************9966544444489******************************************************************* PP

                     HTTT--SEEEECT-SG.HCHHHHHHHHHHHHTTSSSEEE--STTSS--SHHHHCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHH---SEE-HHH CS
                     xxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_31 270 slsGvpfwgaDigGFe.ntteelyaRWvqlGafsPffrnHsskdakrqepwafgeeveeaarkaielRyrLlPylYtlfyeahetglpvvrplfl 363
                     +++G+p++gaD++GF+ n++eel+aRW++lGafsPf+rnH+s++++ qep+++g+ v+ea+r+a+++Ry+LlPy+Ytl  +a+++g ++v plf+
      EPX71699.1 666 NMLGIPMVGADVCGFAdNSNEELCARWMELGAFSPFYRNHNSQGSSLQEPYLWGS-VAEASRRAMNIRYSLLPYWYTLLNQASSEGNTIVTPLFF 759
                     ****************888***********************************9.*************************************** PP

                     H-TT-CCCCC--S-EEETTTEEE----STT-SEEEEEE-SS...EEEETTT--EEES..SEEEEEE--TTSS-EEEETTEEE CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_31 364 efpedektfdiddqfmfGdsLLvaPvleeeatsvevyLPgg...kWydfwtgekyeg..gqtveltapldeiplfvraGaIi 440
                     efp+++++++ d+qfm+Gd+LLv+Pvl++++t+v+ ++Pg+    Wyd+++++ +e   +++ +++apl++i++ +r+ ++i
      EPX71699.1 760 EFPDEPHLAEADRQFMVGDALLVSPVLDPNTTKVNGVFPGNestVWYDWYNHTAIEHkpYENKTMDAPLEHINVAIRGSKVI 841
                     ***************************************6669********99999954334478899988******99887 PP

>> NtCtMGAM_N  N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.4   0.1     9e-34   8.1e-30       1     115 [.      66     183 ..      66     184 .. 0.87

  Alignments for each domain:
  == domain 1  score: 103.4 bits;  conditional E-value: 9e-34
  NtCtMGAM_N   1 gltadlklagsacsvygndieelkleveyetddrlrvkItdannkryevpeell..prpsss....sssssksdnkelevsvtnepFgfkvtRkstgev 93 
                 g+t  l+l+gs+c+ yg d++ l l+v+yet++r+++ I d n+++++ +++    +    +    s+ss +++n  +e+s++ +pF+f +tRk +gev
  EPX71699.1  66 GITGILELIGSPCNAYGADYPYLFLNVTYETEERVHISIRDLNSSQFQFSKRHDvwQA---PlyyaSTSSLNKSNVFYEFSFNADPFEFWITRKTDGEV 161
                 57889*********************************************88334433...2344455556666566********************** PP

  NtCtMGAM_N  94 lfdtsggplvfedqflqlstkl 115
                 lfdt+g+ lvfedq+++l+t++
  EPX71699.1 162 LFDTRGNHLVFEDQYIELTTNM 183
                 ********************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (969 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       373  (0.0208043); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.30s 00:00:00.93 Elapsed: 00:00:00.44
# Mc/sec: 6679.40
//
Query:       EPX71700.1  [L=413]
Description: alanine racemase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.7e-20   72.8   0.0    7.8e-20   71.4   0.0    1.8  1  D-ser_dehydrat  Putative serine dehydratase domain
    2.3e-13   50.3   0.0      3e-13   49.9   0.0    1.1  1  Ala_racemase_N  Alanine racemase, N-terminal domain


Domain annotation for each model (and alignments):
>> D-ser_dehydrat  Putative serine dehydratase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.4   0.0   8.7e-24   7.8e-20       2      95 ..     299     396 ..     298     397 .. 0.91

  Alignments for each domain:
  == domain 1  score: 71.4 bits;  conditional E-value: 8.7e-24
                     EEEEEEEEEEETTTT.....EEES--HHHH-S-S.S--BT-EEE-TTSEEEEB-..EE-SS-EEEE--TT-GGGS-TT-EEEEE-S-HHHHHTT- CS
  D-ser_dehydrat   2 lavlatVvSrptarr.....alvdaGskalslds.sgpgfgkvvagleegwvvsvrrlsdEhgiltleeesaddlrvGdvvrlipnHaCptvnlh 90 
                     + v+a+V S + +r+     al++aG++a+s+++ ++ g+g v +   e+  v+  rls+Ehgil+ ++++a  ++  + +++ipnH+C+t++ +
      EPX71700.1 299 AYVVAEVLSNYAGRNgepgeALMNAGVIAMSRETsPKGGHGIVITPGFESFYVD--RLSQEHGILKSKNPTAVLPEPSQYLSIIPNHSCITAAAY 391
                     679***********99999**************966666999997766777755..**************9************************ PP

                     SEEEE CS
  D-ser_dehydrat  91 dayvv 95 
                     ++y++
      EPX71700.1 392 PWYYI 396
                     ****8 PP

>> Ala_racemase_N  Alanine racemase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.9   0.0   3.4e-17     3e-13       1     160 [.      39     215 ..      39     263 .. 0.78

  Alignments for each domain:
  == domain 1  score: 49.9 bits;  conditional E-value: 3.4e-17
                     EEHHHHHHHHHHHHHHSCT.TSEEEEE-HHHHHTTHHHHHHHHHHHTTESEEEESSHHHHH...HHHHTTSCSEEEEESCSTGGGHHHHHH.... CS
  Ala_racemase_N   1 idldalrhNlrrlralagp.gaklmavvKanayghgavevaralaeggadgfgvatleEal...elreagitapilvlegfspeelaalae.... 87 
                     id++++ +N++r+ ++a++ g+ ++a+vK+   + g   +++ l +g+ ++++v+tl Ea    +l + g  +++l+  ++++++l++l e    
      EPX71700.1  39 IDRNKFSQNCNRMLDRAEKiGVSFRAHVKTHKTSEGT--LLQ-LGDGKTKAVVVSTLMEAFsliPLIQEGKINDLLYGLPVANSRLSELYEltki 130
                     8999*************668999*******5555555..555.67899************95554445555555655555999999999999999 PP

                     .TTEEEEESSHHHHHHHHHHHHH..TTS-EEEEEEBESSSSSSSBSC.HHH.HHHHHHHHHTTT.EEEEEEE-S-SST......T CS
  Ala_racemase_N  88 .ydltvtvdsleqlealaaaare..agkplrvhlkidtgmgRlGftp.eel.eellealaalpg.lrleglmtHfasa......d 160
                       +l +++d+++ql+ l ++ ++  + k   +++kid g +R G++  + + ++l++++ +++  ++l g++ H +++      d
      EPX71700.1 131 iPHLRLMIDHPKQLQLLREFSSKipNIKAWSIFVKIDMGTHRAGVDNkSNVvKDLVSEVLSSKTlFSLYGFYCHAGHSyastsiD 215
                     889*******************99999******************99855559*******99999************96665543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (413 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       520  (0.0290033); expected 358.6 (0.02)
Passed bias filter:                      509  (0.0283898); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 2915.71
//
Query:       EPX71701.1  [L=167]
Description: zinc finger protein zas1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       462  (0.0257683); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.30s 00:00:00.83 Elapsed: 00:00:00.51
# Mc/sec: 978.84
//
Query:       EPX71702.1  [L=90]
Description: carboxylesterase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.8e-19   70.4   0.0      2e-19   70.3   0.0    1.0  1  Abhydrolase_3  alpha/beta hydrolase fold


Domain annotation for each model (and alignments):
>> Abhydrolase_3  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.3   0.0   1.1e-23     2e-19      24      92 ..       1      69 [.       1      80 [. 0.96

  Alignments for each domain:
  == domain 1  score: 70.3 bits;  conditional E-value: 1.1e-23
                   HHHHHTSEEEEEE---TTTS-TTHHHHHHHHHHHHHHHTHHHHTETTCEEEEEEETHHHHHHHHHHHHH CS
  Abhydrolase_3 24 lakelgavvvsvdYrlAPehpfPaavedalaalrwlaeqawelgadpsrivlaGdSaGGnlaaavalra 92
                   +++++++vvvsvdYr  P++pfPa ++d++++l +  e+a ++g++ ++++++G S GGn++  +++++
     EPX71702.1  1 MCEQANCVVVSVDYRIGPKTPFPACIDDGWESLLYCYENADAIGINIKKLAIGGSSPGGNISSILCHKI 69
                   699************************************99************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       312  (0.017402); expected 358.6 (0.02)
Passed bias filter:                      256  (0.0142785); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.31s 00:00:00.77 Elapsed: 00:00:00.48
# Mc/sec: 561.24
//
Query:       EPX71703.1  [L=467]
Description: spermidine family transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.6e-28   97.1  39.9    1.1e-27   96.9  39.9    1.0  1  MFS_1     Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.9  39.9   6.3e-32   1.1e-27       3     350 ..      67     447 ..      65     450 .. 0.77

  Alignments for each domain:
  == domain 1  score: 96.9 bits;  conditional E-value: 6.3e-32
       MFS_1   3 laaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrr.vlllglllfalglllllfa.sslwlllvlrvlqGlga 99 
                 +++f + +++++ +p+   +l ++++i++ ++ l+++ly lg a++ ++++++s+  Gr+  v+l  +++ +l+ +  + +  ++ +++  r+++Gl+a
  EPX71703.1  67 MTTFAAQFNSTTMSPTSK-HLINTYHIDEEVATLATSLYVLGIAFGPMIFAPFSEMNGRKIgVFLPFFISIVLT-AGTA-SsDNVAAIMCTRFFSGLFA 162
                 6789999999999****9.******************************************8888888888888.4444.3266669************ PP

       MFS_1 100 galfpagaaliadwfpkeergraigllsagfslGailgpllggllasslg...Wravfyilaivsllafvlfllllpeepperkrkspkeee....... 188
                 ga + + + ++ad++++ er+ a+ ++s ++  Ga +gp++++ll+ +++   Wr++ +++ i+  + +++ ++++ e++++   +++++ +       
  EPX71703.1 163 GAPIVSTGGVLADLWNPAERATALVFYSFFVLSGADFGPIISSLLS-NGSntaWRWPLWFMVIIESFILLVNMAVIDETYVPVILSRKARSLrlstknw 260
                 **********************************************.444567***********87777777799988888888888888878888777 PP

       MFS_1 189 .....kgtgpaplvp.awkallkdpvlwillialllfffgfsg.........lltllplylqevlglsglllaglllallalvgailallagrlsdr.l 271
                      + + +  +++ +  +ll++  +++  i+++++    ++         +lt++p  +   ++++g ++++  ++++ ++g+i++ ++  l ++ +
  EPX71703.1 261 glhaaHDQYKLDVKEfVTFHLLRPLAMLATTIVFFIAL---FAsyvygllyvILTTIPYTFSLSRNWKGTISTL--PMIPVFIGVIIGGVLNMLWNKrY 354
                 77777444444444432233333333332222222222...222224455556666666568888888767777..88888888888777777774443 PP

       MFS_1 272 gr...........rrrlllallllllaalglallavtssavllllvlvl....iGfglgfv.fpsllalasdlappeeagtasglfntagslgga 350
                  +           + rl l++ ++ ++ +g++++a+ts+a +++++ ++    iG+g++++ +++l++l++ +   + a++a++++++a+s+ + 
  EPX71703.1 355 AKllsesgggslpEQRLPLMMMCGWFMPAGIFVFAWTSDANIHWIAPFIgitmIGIGYFIIfQGCLNYLVDAFS--NFAASAIAANTFARSIFAG 447
                 33444566666669*******************************777777789**777772555555555555..**************97665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (467 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       733  (0.0408835); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.31s 00:00:00.94 Elapsed: 00:00:00.49
# Mc/sec: 2864.66
//
Query:       EPX71704.1  [L=303]
Description: cell surface glycoprotein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.1e-14   53.7   0.1    2.6e-13   50.8   0.0    2.6  2  DUF1773       Domain of unknown function
     0.0013   18.6   0.4     0.0043   17.0   0.4    1.9  1  Sugarporin_N  Maltoporin periplasmic N-terminal extension
  ------ inclusion threshold ------
       0.12   12.0   0.1       0.19   11.4   0.1    1.2  1  Porin_7       Putative general bacterial porin
       0.12   12.6   4.0        6.8    7.0   0.1    2.9  3  XhlA          Haemolysin XhlA
       0.27    9.8   0.5       0.43    9.2   0.1    1.4  2  Tweety        Tweety
       0.47   10.6   8.7        3.5    7.8   2.4    2.9  3  DUF2802       Protein of unknown function (DUF2802)
        9.4    5.7   8.5         36    3.8   8.6    1.8  1  Exonuc_VII_L  Exonuclease VII, large subunit


Domain annotation for each model (and alignments):
>> DUF1773  Domain of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       1.9   4.9e+03      17      43 ..      75      96 ..      65     102 .. 0.51
   2 !   50.8   0.0     1e-16   2.6e-13       3      58 .]     212     266 ..     210     266 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 1.9
     DUF1773 17 ysassvpflngeepedeePLLpdigsi 43
                 s+++ + +n+++  +++  L+   + 
  EPX71704.1 75 NSVNEREYQNVDADLQSD--LR---DL 96
                344455555554444444..43...34 PP

  == domain 2  score: 50.8 bits;  conditional E-value: 1e-16
     DUF1773   3 lfsknldfskrksgysassvpflngeepedeePLLpdigsilDinvLS..QlsfFLpG 58 
                   +++ ++++r++g  +  vpflngeep d++  Lp+i s++Din L+  Q++++L G
  EPX71704.1 212 QNRRLYNIQMRSQGRLVDVVPFLNGEEP-DPD--LPRICSVEDINGLTraQCTRYLEG 266
                 56899***********************.***..**********************98 PP

>> Sugarporin_N  Maltoporin periplasmic N-terminal extension
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.4   1.7e-06    0.0043      24      45 ..     145     166 ..     136     169 .. 0.73

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 1.7e-06
  Sugarporin_N  24 asltiEaRLaaLEkrLqeAeqr 45 
                    +lt E+RL  +E+rL   eqr
    EPX71704.1 145 RMLTMEQRLMTMEQRLMTMEQR 166
                   5777888888888888777776 PP

>> Porin_7  Putative general bacterial porin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   7.4e-05      0.19     144     203 ..      32      91 ..      22     104 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 7.4e-05
     Porin_7 144 enfddialydlsynwqlestdyiGvsvnadddldyrevsskylfdlgedsyLtlegeydn 203
                 en  +++ y   +   l+  +yi      ++dl+ ++++++ + +++e +y ++++++++
  EPX71704.1  32 ENTVELSRYLNDFKIALNKKNYIRRKHYLEQDLERNILKAREMNSVNEREYQNVDADLQS 91 
                 788889999999999****************************************99854 PP

>> XhlA  Haemolysin XhlA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.1         5   1.3e+04       4      15 ..      97     108 ..      96     114 .. 0.75
   2 ?    6.3   0.3    0.0044        11       2      28 ..     142     168 ..     141     175 .. 0.76
   3 ?    7.0   0.1    0.0027       6.8       9      43 ..     174     208 ..     168     215 .. 0.63

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 5
        XhlA   4 erlerietkldn 15 
                 e+l  ie++ld 
  EPX71704.1  97 ENLHIIESRLDH 108
                 677788999986 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0044
        XhlA   2 ikerlerietkldnleervdkleekaa 28 
                 +++r  ++e++l ++e+r+ + e++++
  EPX71704.1 142 MEQRMLTMEQRLMTMEQRLMTMEQRQN 168
                 567777888888888888888888775 PP

  == domain 3  score: 7.0 bits;  conditional E-value: 0.0027
        XhlA   9 ietkldnleervdkleekaaeaeekiknleedlkk 43 
                 i+++ld ++ r+d ++++ + ++ +++ +e +l+k
  EPX71704.1 174 IDRRLDGIDRRLDGVDRRLDGVDRRLDGVEVKLNK 208
                 55566666666666666666666666666665554 PP

>> Tweety  Tweety
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1       1.1   2.7e+03     164     318 ..      77      83 ..      43     108 .. 0.49
   2 ?    9.2   0.1   0.00017      0.43     281     333 ..     142     194 ..     134     208 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.1
      Tweety 164 lkkkdvsltelaeqvelvelyRWlaylllllldlviClvlllglarkskcllivvsvlgllalvlsWaslglelasavgasDfCvsPdkyvvkqtkeel 262
                 +++                                                                                                
  EPX71704.1  77 VNER----------------------------------------------------------------------------------------------- 80 
                 2222............................................................................................... PP

      Tweety 263 ssdilqyylkCsqsltnpFqqrLtesqkaltemqeqveellriavelfptaekkLl 318
                                                                      + +
  EPX71704.1  81 -----------------------------------------------------EYQ 83 
                 .....................................................122 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00017
      Tweety 281 FqqrLtesqkaltemqeqveellriavelfptaekkLlaiqellnsternlhq 333
                  +qr+ ++++ l +m++ + ++++   + f+ ++++L +i++ l+  +r l  
  EPX71704.1 142 MEQRMLTMEQRLMTMEQRLMTMEQRQNVRFDGIDRRLDGIDRRLDGVDRRLDG 194
                 5788888888999*******************************999988865 PP

>> DUF2802  Protein of unknown function (DUF2802)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.1       4.9   1.2e+04      13      29 ..      99     115 ..      94     119 .. 0.64
   2 ?    7.8   2.4    0.0014       3.5       2      28 ..     142     168 ..     141     172 .. 0.89
   3 ?    6.0   0.1    0.0049        13       2      34 ..     181     218 ..     173     231 .. 0.58

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 4.9
     DUF2802  13 lkqleerleeleqqdpq 29 
                 l+ +e+rl++ ++ +++
  EPX71704.1  99 LHIIESRLDHCRNAEQS 115
                 55566777777666554 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0014
     DUF2802   2 mgqrlaelekrlkqleerleeleqqdp 28 
                 m+qr+ ++e+rl  +e+rl  +eq+++
  EPX71704.1 142 MEQRMLTMEQRLMTMEQRLMTMEQRQN 168
                 8999*****************999984 PP

  == domain 3  score: 6.0 bits;  conditional E-value: 0.0049
     DUF2802   2 mgqrlaelekrlkqleerleel....eqqd.pqsklYs 34 
                 +++rl+ +++rl+ +++rl+ +    ++q+ ++ +lY+
  EPX71704.1 181 IDRRLDGVDRRLDGVDRRLDGVevklNKQEyQNRRLYN 218
                 44555555555555555555557787444447788887 PP

>> Exonuc_VII_L  Exonuclease VII, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   8.6     0.014        36     188     257 ..     127     207 ..      21     235 .. 0.47

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.014
  Exonuc_VII_L 188 krqrldeleerleralkkqlkkkrerleelkerl.kekleekkerlkklkerle...........lleekkerleeleekle 257
                     +  +++ ++l+r++++++ + ++rl ++++rl +   ++++ r++ + +rl+           +l+  ++rl+ +e kl+
    EPX71704.1 127 FLSDPNNIFYSLNRSMEQRMLTMEQRLMTMEQRLmT-MEQRQNVRFDGIDRRLDgidrrldgvdrRLDGVDRRLDGVEVKLN 207
                   222233344444444444444444444444444422.111222222222222222222111222222222222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (303 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       909  (0.0507); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.64u 0.32s 00:00:00.96 Elapsed: 00:00:00.53
# Mc/sec: 1732.60
//
Query:       EPX71705.1  [L=281]
Description: hypothetical protein SOCG_01919 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (281 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       646  (0.036031); expected 358.6 (0.02)
Passed bias filter:                      283  (0.0157845); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.60u 0.35s 00:00:00.95 Elapsed: 00:00:00.56
# Mc/sec: 1521.01
//
Query:       EPX71706.1  [L=266]
Description: hypothetical protein SOCG_01920 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-05   23.7   1.3    8.1e-05   22.5   1.2    1.6  1  WTF         WTF protein
  ------ inclusion threshold ------
      0.021   13.6   0.2      0.021   13.6   0.2    1.7  2  Presenilin  Presenilin
      0.038   14.3   2.8       0.36   11.2   0.1    2.3  2  DUF1772     Domain of unknown function (DUF1772)
        1.3    7.7   9.3       0.45    9.2   1.4    2.0  2  DUF2207     Predicted membrane protein (DUF2207)


Domain annotation for each model (and alignments):
>> WTF  WTF protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   1.2   1.8e-08   8.1e-05       1     203 [.       1     205 [.       1     222 [. 0.56

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 1.8e-08
         WTF   1 mknnytsLksslDeedelktdheiDLekGllpeYnseeegaLPpysdiakl.....snsasselinPnthrenetsrshdnsspfllk.....llisvi 89 
                 mkn+yts+    D e++lkt ++   ek          eg+ Ppys   k+     ++   s   + +   +n+ s+ +      + k     ++  ++
  EPX71706.1   1 MKNKYTSVS---DSEESLKTLND---EKSDT----RSSEGTPPPYSASNKFidlemAD--GSAQHSAQESVDNTRSDPSA--NKECWKtfaagIMTIIT 85 
                 788887664...77778888776...66543....3468999****999984443211..12222222222222233222..34455522221222222 PP

         WTF  90 sisvlnvtavCvlklkdaifGkvey.slvlgifcavcallfillty..fyetWtkavkdgvkvtviflakcvkviavglfnirkklkviillllkvlif 185
                  ++ l ++a  ++ +k + +  + y   +++i  + + ll il+ty  +y    +a+k+++k +     kc+k  +   +n+ k+    + +   ++ +
  EPX71706.1  86 ILYNLVFLA-IIFGYKVSPYSIAFYwLAAVSIGTIFIFLLTILVTYpeWYREAGRATKKCIKKSGRATKKCIKKSGRATKNYIKEGGGAPAICKALITL 183
                 223333333.356676666644433033455544555555566665334555568999****9999******************998888887777777 PP

         WTF 186 illgavksgdlnlnkal....a 203
                 i l+ v    l+l        +
  EPX71706.1 184 ISLNGVGGYVLKLAGGFeyihS 205
                 7666555555555544445553 PP

>> Presenilin  Presenilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.2   4.8e-06     0.021      43     113 ..      60     130 ..      36     138 .. 0.74
   2 ?   -2.7   0.3      0.41   1.8e+03      64      81 ..     205     222 ..     195     229 .. 0.62

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 4.8e-06
  Presenilin  43 ytpfeeesdstgqkllnsllnalililvivvvtfllvlL..ykyrcykvikgwlilsslllLflvsglllaev 113
                  +  ++++ s +++++++++ ++++i+ i+   ++l ++  yk+  y +   wl+  s+  +f++  ++l + 
  EPX71706.1  60 DN--TRSDPSANKECWKTFAAGIMTIITILYNLVFLAIIfgYKVSPYSIAFYWLAAVSIGTIFIFLLTILVTY 130
                 22..2377889999**************9988888777722556669999******99999999888777655 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.41
  Presenilin  64 alililvivvvtfllvlL 81 
                 ++++++v++v+ ++l +L
  EPX71706.1 205 SAMVLVVLAVLNICLFVL 222
                 444455555555555544 PP

>> DUF1772  Domain of unknown function (DUF1772)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   7.9e-05      0.36      24      87 ..      69     131 ..      49     165 .. 0.63
   2 ?    3.0   0.7     0.026   1.2e+02      85     100 ..     227     252 ..     174     263 .. 0.60

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 7.9e-05
     DUF1772  24 llkqwrrlfkrgkavfpplallsalafa.ylaaraasrgarllylaaaal.lllsivpyTllvmvP 87 
                   + w++ f++g  ++  + +l  l+f+  ++  + s+ + + y +aa+   ++ i+++T+lv  P
  EPX71706.1  69 NKECWKT-FAAG--IMTIITILYNLVFLaIIFGYKVSPYSIAFYWLAAVSiGTIFIFLLTILVTYP 131
                 4455655.5455..4555555555666534444455555555554545555889999999999877 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.026
     DUF1772  85 m.........vPtNnkLaalk.eeda 100
                           vPtNn++ + + + ++
  EPX71706.1 227 PigfgnmtiiVPTNNRISRNRpPRNE 252
                 0333334555****998888644443 PP

>> DUF2207  Predicted membrane protein (DUF2207)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   1.4    0.0001      0.45     359     441 ..      54     133 ..       2     144 .. 0.53
   2 ?    4.2   1.0    0.0032        14     351     431 ..     143     224 ..     128     235 .. 0.45

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.0001
     DUF2207 359 kwksavkkkergyfdkkgkkklkklsalglgliilglilillallllvlllvfllilllillliaiivlllfsrllgrrteeG 441
                 + +++v++      d   +k+ +k  a+g++ ii +l+ ++++++ +++ +++++i ++ l+ ++i+ +++f  ++    +e+
  EPX71706.1  54 SAQESVDN---TRSDPSANKECWKTFAAGIMTIITILYNLVFLAIIFGYKVSPYSIAFYWLAAVSIGTIFIFLLTILVTYPEW 133
                 33444444...233445566666666666666666666666666666666666666666666666665555544443334444 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.0032
     DUF2207 351 kkfkkalkkwksavkk...kergyfdkkg..kkklkklsalglgliilglilillallllvll..........lvfllilllillliaiivlllfs 431
                 k +kk+ ++ k+ +kk   ++++y+++ g   ++ k l++l+ + ++               +           +  +++l++l++++i++++l+ 
  EPX71706.1 143 KCIKKSGRATKKCIKKsgrATKNYIKEGGgaPAICKALITLISLNGVG--------------GyvlklaggfeYIHSAMVLVVLAVLNICLFVLLI 224
                 333444444444444455333333333322222222222222222222..............1233344444455556666666666666655543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1279  (0.0713369); expected 358.6 (0.02)
Passed bias filter:                      699  (0.0389871); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.71u 0.35s 00:00:01.06 Elapsed: 00:00:00.56
# Mc/sec: 1422.13
//
Query:       EPX71707.1  [L=274]
Description: hypothetical protein SOCG_01921 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (274 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       506  (0.0282224); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.36s 00:00:00.98 Elapsed: 00:00:00.56
# Mc/sec: 1471.10
//
Query:       EPX71708.1  [L=403]
Description: NADPH dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-98  330.7   0.0    1.3e-98  330.5   0.0    1.0  1  Oxidored_FMN  NADH:flavin oxidoreductase / NADH oxidase famil
  ------ inclusion threshold ------
      0.037   14.3   0.1      0.074   13.3   0.1    1.4  1  DUF4883       DOmain of unknown function (DUF4883)


Domain annotation for each model (and alignments):
>> Oxidored_FMN  NADH:flavin oxidoreductase / NADH oxidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  330.5   0.0  1.4e-102   1.3e-98       1     341 [.       9     361 ..       9     362 .. 0.92

  Alignments for each domain:
  == domain 1  score: 330.5 bits;  conditional E-value: 1.4e-102
                   CCCS-EEETTEEESSSEEE----S-TTTTTCS.HHHHHHHHHHHHHHTT-SEEEEEEEESSCCC-SCTTSEE-SSGGGHHHHHHHHHHHHHTT-EEE CS
  Oxidored_FMN   1 kLFkPikignmtLknRivmapmtrlraldkgnvledlaaeyysqraeipvtliiteaafvnpksggfdnapgiwdeeqieewrklteavhengskvv 97 
                   +LF+ i++gnmtL++Ri+ ap trlra+d+   + dl++++ys ra+ p+tl+i+ea+ v+   g ++n pgiw++ q+++w+k+t+avh++gs+++
    EPX71708.1   9 NLFNQIQVGNMTLNHRIAFAPTTRLRATDDH-TPSDLMLQHYSDRAQTPGTLLISEATLVSLRAGLYPNIPGIWNDRQVQAWKKITDAVHAKGSYMA 104
                   69****************************9.6678************************************************************* PP

                   EEEE--GGGS..SCSTCEC....SS.ESSSSSTTT-....S...CS-EE--HHHHHHHH.HHHHHHHHHHHHTT-SEEEEEE-CTSHHHHHH-TTT- CS
  Oxidored_FMN  98 vqlwhlGreakseyladqe..vdspsdpvaldaqee...esaeevykkeltkeeikqli.qefveAAkraieAgfDgVeihganGYLlnqFlspksn 188
                    qlw +Gr    e l++++   +sps+  + +++++    ++++   ++lt+eei+ +i +++++AA +a++AgfD Ve h+a+GYLl+qFl+p  n
    EPX71708.1 105 CQLWFAGRVGSPELLKKHGldLVSPSALYESEDSKKaaeAAGNPI--RALTEEEIQSIIyDDYKNAAINAMNAGFDCVELHSAHGYLLDQFLQPAAN 199
                   ****************99977778885554444444777888999..**********99578*********************************** PP

                   ---STTSSSHHHHHHHHHHHHHHHHHHH-SSSEEEEEECE--STTS--HHHH....HHHHHHHCHCCEEEEEEETT-SSSSSTTS-TTTTHHHCCTT CS
  Oxidored_FMN 189 krtDeygGslenRarFllevvdaVkeavgeervgyRlSpedvvekgldfaet....aqkivllkelekrlkdgkklalvhaaeprkrgagsvrteqe 281
                   +rtD+ygGs+enRar lle+vd   + +g+e+v++RlSp   ++ ++ + +t    + + ++++el+kr+ +gk+la++ ++epr+ ++  v+    
    EPX71708.1 200 QRTDNYGGSIENRARLLLEIVDLLSDTIGAEKVAIRLSPWAKFQGMKAEKDTvhpiTTFSYVVNELQKRANKGKQLAYLSVVEPRVNNNVDVNLADI 296
                   *************************************************99999988999********************************99976 PP

                   .HHHHHHCCCHSSEEEE-SS--SHHHHHHHHHT....TS-SEEEESTHHHH-TTHHHHHHCCTCG CS
  Oxidored_FMN 282 .kntefvkevwkkplitvgriadeekaaeivae....geadLvamgRefladpdlveklkkglpl 341
                    + ++f+k++wk+++++ g+++ ++ + + ++     +++++va+ R+f ++pdlv++lk+gl+l
    EPX71708.1 297 aGSNDFIKKLWKGNVLQGGNYTYDKPEFKSLKAdvdgDNRTMVAFSRYFTSNPDLVKRLKEGLEL 361
                   7*******************99776433333223455899**********************986 PP

>> DUF4883  DOmain of unknown function (DUF4883)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.1   8.3e-06     0.074       5      70 ..     259     325 ..     256     335 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 8.3e-06
     DUF4883   5 fyYtnllakklksnkkl.klsvldtnlykeievdkeeieiiknflksLkkenfiekekkleekpeyk 70 
                 +y +n+l+k+ ++ k+l  lsv++ +++++++v+  +i   ++f+k+L k n ++  + + +kpe+k
  EPX71708.1 259 SYVVNELQKRANKGKQLaYLSVVEPRVNNNVDVNLADIAGSNDFIKKLWKGNVLQGGNYTYDKPEFK 325
                 6889*******9966651689*********************************9999999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (403 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       473  (0.0263818); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.33s 00:00:01.00 Elapsed: 00:00:00.55
# Mc/sec: 2201.75
//
Query:       EPX71709.1  [L=134]
Description: NADPH-hemoprotein reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.8e-20   71.5   0.1    6.6e-20   71.0   0.1    1.2  1  Cyt-b5    Cytochrome b5-like Heme/Steroid binding domain


Domain annotation for each model (and alignments):
>> Cyt-b5  Cytochrome b5-like Heme/Steroid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.0   0.1   3.7e-24   6.6e-20       1      73 [.      60     131 ..      60     132 .. 0.97

  Alignments for each domain:
  == domain 1  score: 71.0 bits;  conditional E-value: 3.7e-24
                 EHHHHTTTECTTEEEEEETTEEEECTTTCCCSTTCSHHHHTTTTSBBHHHHHHTTGGCHHHHHHHHGGEEEEE CS
      Cyt-b5   1 tleelskhngkndlwvairgkVYDvskflskhpGgesailkyaGkDateafksvvhsekdaekllkkylvGkl 73 
                 t+eel+khn+k+d+w+a+rgkVY+v+ ++ +hp g++ i k+ G Dat+   +  h + + e++l++++vG l
  EPX71709.1  60 TMEELKKHNTKDDCWIAVRGKVYNVTAYAPYHPDGAKKIFKHSGIDATKQYMKA-HADVNEEEMLRTCYVGPL 131
                 789***************************************************.999999**********87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1247  (0.0695521); expected 358.6 (0.02)
Passed bias filter:                      569  (0.0317363); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.36s 00:00:00.93 Elapsed: 00:00:00.55
# Mc/sec: 737.19
//
Query:       EPX71710.1  [L=266]
Description: hypothetical protein SOCG_06527 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        1.6    6.9   7.2          2    6.6   7.2    1.1  1  DUF2070   Predicted membrane protein (DUF2070)


Domain annotation for each model (and alignments):
>> DUF2070  Predicted membrane protein (DUF2070)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   7.2   0.00011         2      75     176 ..      81     193 ..      61     210 .. 0.53

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.00011
     DUF2070  75 alltelivviisllaillsall...qalvllalvlslalvfalrllvlvav...sdesllkavlpaliqpllailllvly......fspesflllllls 161
                 + ++++++ +++l+ i+  + +   ++ ++    +s+ ++f++ l +lv++    ++  +++ + al   +l ++ + +y      ++ e++  l+l++
  EPX71710.1  81 MTIITILYNLVFLAIIF-GYKVspySRAFYGLAGVSIGSIFIFLLTILVTYpewYRQAGFNMCVSALYVCFLNVPGFAMYytakkiIQFEKINNLFLYV 178
                 22333333332222222.222245444445555556888888888888777222344455555666666666666666667777765455555555555 PP

     DUF2070 162 lifalavylfivvvd 176
                 + f+ +v+++++ ++
  EPX71710.1 179 VCFVDFVLFLFISMN 193
                 555544444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1011  (0.0563891); expected 358.6 (0.02)
Passed bias filter:                      545  (0.0303977); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 1806.63
//
Query:       EPX71711.1  [L=281]
Description: hypothetical protein SOCG_06528 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.2e-14   52.2   0.0    7.7e-14   51.7   0.0    1.3  1  Lactamase_B_2  Beta-lactamase superfamily domain
      9e-11   41.9   0.0    1.2e-10   41.6   0.0    1.1  1  Lactamase_B_3  Beta-lactamase superfamily domain


Domain annotation for each model (and alignments):
>> Lactamase_B_2  Beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.7   0.0   8.6e-18   7.7e-14       2     201 .]      28     235 ..      27     235 .. 0.73

  Alignments for each domain:
  == domain 1  score: 51.7 bits;  conditional E-value: 8.6e-18
                    EEEES--TT.................HHHHHTCGGS--SSS--..SEEEEE-SS--HHHHGGGGCCCC..C--EEEEEEEEHHHHHHCCTTCGHHH CS
  Lactamase_B_2   2 riLiDagpd.................lrqqalralqPvelrdelppidaVllthaHyDHlaglltlre..lrpkklplyapkgvlavleanfvyla 78 
                    ++++D++++                 ++ q ++   P+  +++lppidaVll+h+  DH  +l++l +  l +   +++ +++ +++l+ +     
     EPX71711.1  28 NFITDPVFSsagtkmkyeskvlkdgsVVLQ-NSFG-PALGLESLPPIDAVLLSHE--DHADNLDDLGRrlLDG--RKVITTMDGAKNLQPRP---- 113
                    678888888888888888888777774444.3333.444899**********986..8888899998854444..35777777777777772.... PP

                    CHTTTTEEEEEE-TTSEEEE..CSTTEEEEEEEE-EE--CTCCE-TTTSEEEEEE....CTTEE......EEEESS-S---..HHHHHHHCT-SEE CS
  Lactamase_B_2  79 leeepavnvheldwgesfel..gdggleitatparhksgrrldrnagdtlGlrie....gggkr......vyyigDtgyip..eeigerlggadll 160
                            v+ + ++e++ l  g+  ++it +p rh  g+       ++ G+++e    g++ +      +y++gDt yi+   ei+++++ + ++
     EPX71711.1 114 -------GVRGIRPWETIPLevGGKTFQITGVPTRHVPGE-------ECTGFILEcdtfGTN-SkglsnvIYFSGDTVYIDemNEIRKKYH-VCVA 193
                    .......467888888777766777899999999999999.......9*******8765222.2578899***********6666888887.6677 PP

                    EEE-S.-SSTTHHHH.HHT---S..TSHHHHCTTSSSSEEEEESB CS
  Lactamase_B_2 161 lldit.ayeddemir.hmgHltp..eeaveaaadlgakrlvliHi 201
                    +l+ + a  +   ++ ++  +t+  ++a ++++ l+++ +v+iH+
     EPX71711.1 194 ILNLGkAIMP---SHdGPLQITMdgKQAGRLVKNLDVGLMVPIHF 235
                    7775503333...223444444466*******************7 PP

>> Lactamase_B_3  Beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.6   0.0   1.3e-14   1.2e-10       1     163 []      11     234 ..      11     234 .. 0.79

  Alignments for each domain:
  == domain 1  score: 41.6 bits;  conditional E-value: 1.3e-14
  Lactamase_B_3   1 eltwlghnsflletagarilvDPfkanlgyeppa.........................eeaDlvlisqaledHahletlkql............. 58 
                    ++t l  ++  l++++++ ++DP++ ++g++ +                          + +D+vl+s++       ++l  l             
     EPX71711.1  11 SITHLTTATAILSIDNVNFITDPVFSSAGTKMKYeskvlkdgsvvlqnsfgpalgleslPPIDAVLLSHEDHA----DNLDDLgrrlldgrkvitt 102
                    5899********************87555555545578999999************************97633....3333333344677777777 PP

  Lactamase_B_3  59 .........aenvkvleeges..levg..gleiravatshdavggsergenngflleqd.........gltiyhlGhlahelsseelkelgrvDvv 132
                                v+ ++++e+  levg   ++i++v+t h   +g+e    +gf+le d            iy+ G++++  +++e+ +  +v v 
     EPX71711.1 103 mdgaknlqpRPGVRGIRPWETipLEVGgkTFQITGVPTRHV--PGEE---CTGFILECDtfgtnskglSNVIYFSGDTVYIDEMNEIRKKYHVCVA 193
                    77777666666666666688855556434788888888883..3433...346777764455566655667************************* PP

  Lactamase_B_3 133 ltPvgg..........pltlgqeealelakrLkpklvlPmh 163
                    +++ g+          ++t++ ++a +l+k L+  l++P+h
     EPX71711.1 194 ILNLGKaimpshdgplQITMDGKQAGRLVKNLDVGLMVPIH 234
                    ***************99***********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (281 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       310  (0.0172904); expected 358.6 (0.02)
Passed bias filter:                      304  (0.0169558); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.44
# Mc/sec: 1935.34
//
Query:       EPX71712.1  [L=222]
Description: hypothetical protein SOCG_06529 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.23   11.6   0.3       0.23   11.6   0.3    1.8  2  HemY_N    HemY protein N-terminus


Domain annotation for each model (and alignments):
>> HemY_N  HemY protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.5      0.54   9.7e+03      24      26 ..      89      91 ..      77     106 .. 0.47
   2 ?   11.6   0.3   1.3e-05      0.23       1      48 [.     167     214 ..     167     217 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 0.54
      HemY_N 24 vll 26
                 ++
  EPX71712.1 89 NIV 91
                111 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 1.3e-05
      HemY_N   1 GyVliawggyrietslvvavlllvllfvllylllrllrlllrlparvr 48 
                 GyVl   gg ++  s +v+v+l+vl + l++ll+r l++ ++l++ +r
  EPX71712.1 167 GYVLKLAGGFEYIHSAMVLVVLAVLNICLFVLLIRKLQFSMNLSNLFR 214
                 8999999********************************999988766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       870  (0.0485247); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.29s 00:00:00.76 Elapsed: 00:00:00.57
# Mc/sec: 1173.25
//
Query:       EPX71713.1  [L=292]
Description: hypothetical protein SOCG_06530 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
        2.1    8.1   6.3       0.95    9.2   4.2    1.5  1  FA_desaturase  Fatty acid desaturase


Domain annotation for each model (and alignments):
>> FA_desaturase  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   4.2   5.3e-05      0.95      95     178 ..     115     194 ..      95     206 .. 0.66

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 5.3e-05
  FA_desaturase  95 yllrlllgllvlg.wllalvlglwlrrlarrrapsksrrrkwrllawlllllawlglwlalllllglall..lwlvplllllfllal 178
                     +l++ l    +  ++++     +++ +   ++++k++ + w  ++++++l+  +++++++l++ +l++   + l+pl+l ++++ +
     EPX71713.1 115 LRLGWCLNGSIILnFIFS-----YKYLVPFIKESMKESVWLWFQITVAVVLV--IATFYMFLFFCSLLVDfiVTLIPLVLSGTTMLV 194
                    444444444444424333.....66666666777777775566666666666..888888888888888888999999999887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (292 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1077  (0.0600703); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.28s 00:00:00.85 Elapsed: 00:00:00.46
# Mc/sec: 1911.80
//
Query:       EPX71714.1  [L=124]
Description: hsp16-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-12   46.7   0.1    3.5e-12   46.4   0.1    1.1  1  HSP20       Hsp20/alpha crystallin family
    1.6e-09   37.2   0.0    2.6e-09   36.5   0.0    1.3  1  ArsA_HSP20  HSP20-like domain found in ArsA
  ------ inclusion threshold ------
      0.016   16.2   0.0      0.019   16.0   0.0    1.3  1  CS          CS domain


Domain annotation for each model (and alignments):
>> HSP20  Hsp20/alpha crystallin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.4   0.1   5.8e-16   3.5e-12       1      69 [.      40     112 ..      40     115 .. 0.90

  Alignments for each domain:
  == domain 1  score: 46.4 bits;  conditional E-value: 5.8e-16
                 E--SSEEEEEEEEE-TT--CCCEEEEEETTEEEEEEE--......---TT----SS---EEEEEE--STTB-T CS
       HSP20   1 dikeeeeefevkldvpglkkeelkvkvednrvlvkgehe....eeeedekglikerssrkFsrkftLPenvda 69 
                 d++e ++  ev +++pg+kk++++v++++++++++ge      +e ++++  ++er+ ++Fsr++t+P+ vda
  EPX71714.1  40 DVHEGKDTVEVDVELPGVKKQDVQVHYDEGKLTISGESVnerkSESDKGNQRWSERRFGSFSRTITIPNRVDA 112
                 67899*******************************98866656666778899****************9996 PP

>> ArsA_HSP20  HSP20-like domain found in ArsA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.5   0.0   4.3e-13   2.6e-09       2      49 ..      46     115 ..      45     121 .. 0.95

  Alignments for each domain:
  == domain 1  score: 36.5 bits;  conditional E-value: 4.3e-13
  ArsA_HSP20   2 deyvlkldLPfvdkeeidlsrsgdeLtIkig......................nfrRqitLPsvlarkev 49 
                 d ++++++LP+v+k++++++ ++  LtI+ +                      +f+R+it P++++++++
  EPX71714.1  46 DTVEVDVELPGVKKQDVQVHYDEGKLTISGEsvnerksesdkgnqrwserrfgSFSRTITIPNRVDACTA 115
                 7899****************************************************************87 PP

>> CS  CS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   16.0   0.0   3.1e-06     0.019       6      42 ..      42      79 ..      37     112 .. 0.83

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 3.1e-06
                EEETTEEEEEEE-TTCTTTTTCEEEEEETTEEEEEE...T CS
          CS  6 yQtldeVvvtiyvkkvnikkkdvkvefkerslkvki...g 42
                ++ +d+V+v +++++v  kk+dv+v+  e +l+++    +
  EPX71714.1 42 HEGKDTVEVDVELPGV--KKQDVQVHYDEGKLTISGesvN 79
                67789**********9..*************999974333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       436  (0.0243181); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.29s 00:00:00.69 Elapsed: 00:00:00.45
# Mc/sec: 824.56
//
Query:       EPX71715.1  [L=1676]
Description: ATP-dependent DNA helicase recQ [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      5e-10   39.4   0.0      1e-09   38.4   0.0    1.5  1  DEAD            DEAD/DEAH box helicase
    2.8e-06   27.5   0.0      2e-05   24.7   0.0    2.3  2  ResIII          Type III restriction enzyme, res subunit
    1.1e-05   25.8   0.0    2.9e-05   24.4   0.0    1.7  1  Helicase_C      Helicase conserved C-terminal domain
    0.00042   20.7   0.1     0.0015   18.9   0.1    2.0  1  OrsD            Orsellinic acid/F9775 biosynthesis cluster pr
  ------ inclusion threshold ------
      0.038   13.5   0.0      0.073   12.6   0.0    1.4  1  PS_Dcarbxylase  Phosphatidylserine decarboxylase
       0.51    8.6  23.1      0.094   11.0   2.9    3.4  3  CDC45           CDC45-like protein


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.4   0.0   3.5e-13     1e-09      12     172 ..    1114    1265 ..    1104    1269 .. 0.75

  Alignments for each domain:
  == domain 1  score: 38.4 bits;  conditional E-value: 3.5e-13
                  HTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCSEEEEEHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   12 lgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvdivvgtpgrl 108 
                   g++++++  +T+sGK+l fl+p+l  + +++ ++++ +l+v+P  +L e++++++++ +    +++  + ++ + +     l + +d+++ t +  
  EPX71715.1 1114 QGQKNLIIVLPTASGKSLSFLLPAL--I-DKTIRPNNTTLVVVPAISLREDMMRRVNETGL---VECTNTWTQYRNQPVTPSL-KLPDLFILTYESA 1203
                  4678*********************..3.445778889******************99999...4555666777777777777.77********999 PP

                  HHHH......HCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHH CS
                  xxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  109 ddll......stgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkd 172 
                  ++        s g     ++  +V+DEa+ ll +  s + n+ l q p+ ++       + +lS T+p+ 
  EPX71715.1 1204 LSNSalaffeSLG--VAGRLARVVVDEAHSLLTD--STWRNT-LLQAPRLSALFA---PIHLLSGTFPRP 1265
                  9965566543323..3889999**********98..444444.444433333322...377777777765 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.4      0.78   2.3e+03      96     122 ..     545     584 ..     513     600 .. 0.63
   2 !   24.7   0.0   6.7e-09     2e-05      21     154 ..    1108    1242 ..    1078    1261 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.78
                 -...........-SEEEEEHHHHHHTH............. CS
      ResIII  96 a....kekdstnkkilvttiqsldadseee.........e 122
                         ++++++i+++++++ld+++e e         e
  EPX71715.1 545 DtaigDDDNDNDNDIIMMEEEALDESEEIEreralqlelE 584
                 03344445567999*********99996665555444331 PP

  == domain 2  score: 24.7 bits;  conditional E-value: 6.7e-09
                  .......TTSEEEEEESTTSTHHHHH..HHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--.......-SEEEEE CS
      ResIII   21 s.....krdkrglikmaTGtGKTlva..aklierllkkgkeekflflvprkslleqtleefkkflseaykeigkkvsgdkkkakekdstnkkilvtt 110 
                  s     +++k+++i+++T +GK+l     +li++  +  +++ +l++vp +sl e ++++++++   +    ++ +++ ++++   + +  ++++ t
  EPX71715.1 1108 SvyfsvQGQKNLIIVLPTASGKSLSFllPALIDKTIR--PNNTTLVVVPAISLREDMMRRVNETGLVEC---TNTWTQYRNQPVTPSLKLPDLFILT 1199
                  255566899*************987622456666665..567*******************99999884...55566666666566888889***** PP

                  HHHHHHTH........HHHTTT-SEEEEETGGGTTS.TTTHHHH CS
      ResIII  111 iqsldadseeeeeeseellrdrfdviiiDEaHrlgakkswreil 154 
                  ++s+ ++s      +     +r   +++DEaH l  +++wr+ l
  EPX71715.1 1200 YESALSNSAL-AFFESLGVAGRLARVVVDEAHSLLTDSTWRNTL 1242
                  ***9999933.344444455555699**********99***943 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.0   9.7e-09   2.9e-05      73     110 ..    1323    1360 ..    1321    1361 .. 0.95

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 9.7e-09
                  SGGGTSSSTSTTESEEEESSSSSSHHHHHHHHTTSSST CS
  Helicase_C   73 tdvaerGidipkvnlVinfdlprnvtsyiqriGRtgRa 110 
                  t++ + Gid  +v+lV++++lp++  +y q  GR+gR 
  EPX71715.1 1323 TKAFGLGIDYGEVRLVVHYGLPTSCMQYAQETGRAGRD 1360
                  788999*******************************6 PP

>> OrsD  Orsellinic acid/F9775 biosynthesis cluster protein D
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.1   5.1e-07    0.0015      13     114 .]     236     337 ..     228     337 .. 0.83

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 5.1e-07
        OrsD  13 iCreCkyavlpselerHLrkrhrqlk.rektqelletvehemslrqldelareaeavslpsaesepipgLpvy.eGyrC..rakakCkyltrslktlrk 107
                  C eC   + ++++++H+++ h+  + ++++++l ++++h + +++ + +  ++   s+     + i gLpv  +Gy+C  + + +  ++    +t  +
  EPX71715.1 236 SCVECGGLLDVEHVKSHMQNVHHVFRfEDEVENLFKQMNHIDLKSPST-V-SNERSSSWE--TYPCIFGLPVLlNGYECtiCFDSGGGFVHGIADTFYR 330
                 599********************9973456788999998888888888.4.455555555..556799****99*****988899999*********** PP

        OrsD 108 Hlqkkhg 114
                 H++++hg
  EPX71715.1 331 HVRRHHG 337
                 ***9995 PP

>> PS_Dcarbxylase  Phosphatidylserine decarboxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   2.4e-05     0.073      41     158 ..     832     972 ..     817     981 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 2.4e-05
  PS_Dcarbxylase  41 sviqvKgityslrdLlgeasessadsfkngyfvviyLspgdyHryhaPvsgkveerrhipGells.......vnpsalkel.............. 114
                     sv+  K  ++s +++l+ +++  a++f+++ f+ +y s g   r    v +++++ ++ + el+                +              
      EPX71715.1 832 SVVFKKDLKWSKTSILNYETK--ATKFNELLFCLVYISAGQPARAKEMVHWTLKNSKYKARELYLmfgrlmiY-------Srydktrnmkfaekp 917
                     566679999*********999..88***********************************9987733333321.......223333345666666 PP

  PS_Dcarbxylase 115 ......rglftlneRvvlview.kGkvavvpvGatnvgsivln....vlkgdelk 158
                           ++l tl  R + +++  + + + v+ G  ++  + +n    v++g++l+
      EPX71715.1 918 iprflpESLSTLALRYYALVRPfQAFLSSVKTGNKQAAAVYTNamfvVNGGKRLD 972
                     7777777777777777777775234777777777777777777666655555555 PP

>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   2.9   3.1e-05     0.094      99     174 ..      32     107 ..      13     162 .. 0.58
   2 ?    2.3   0.0     0.013        39      53     195 ..     231     414 ..     214     458 .. 0.57
   3 ?   -1.2  12.2      0.15   4.5e+02      99     165 ..     554     621 ..     498     648 .. 0.61

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 3.1e-05
       CDC45  99 eekerivvfDDgdieeeleeereayealeeeeesdeedeeeeeeddddeeeeeeeeedeedeeedeeeskkkrk...sk 174
                 ++++++ v+  g+  +++ e +ea+ ++  + +++e++ +e  +d  ++++++++++++++++++++++k k++   +k
  EPX71715.1  32 KNNQDVNVVAKGN--DKIIEGKEAVSSIAIDVDDEEDQ-DETRDDYGNDNDDNDNDDNTDRKDANNDNDKAKNNvqpQK 107
                 4566666666666..66667777777777766665333.2222222233333333333333333333333332221111 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.013
       CDC45  53 elrsvvllnlGalvdleellelee..........gvevyViDshRPwnleNlfgss................................eekerivvfDD 109
                 +++ v ++ +G+l+d+e++ +  +          +             +eNlf++                                 ++ e  ++fD 
  EPX71715.1 231 SIHAVSCVECGGLLDVEHVKSHMQnvhhvfrfedE-------------VENLFKQMnhidlkspstvsnerssswetypcifglpvllNGYECTICFDS 316
                 688999999******99887755423334444440.............555554445555555555555555569999999999999977788888888 PP

       CDC45 110 gd.....ieeelee.ere......ayealeeeeesdeedeeeeeeddd..deeeeeeeeedeedeeedeeeskkkrksksdeeeesddddersrkrrrs 194
                 g      i++++ +  r       ++++l++ + + e+++  ++ d+   +   +  +e+++ d ++++ +++  rk+++ ee  +d+d+  +r+++  
  EPX71715.1 317 GGgfvhgIADTFYRhVRRhhgrtvNVNELDFAPVVGEDRN--HQLDSLidSWYLDRVDEDSDADANTNTYTNTYARKRNATEEYGDDNDSVDARQKNLL 413
                 8765444444444432221223334555555555544433..222222111122222222222222222233333333333333355566666666555 PP

       CDC45 195 e 195
                 +
  EPX71715.1 414 N 414
                 4 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 0.15
       CDC45  99 eekerivvfDDgdieeeleeereayealeeeeesdeede...eeeeeddddeeeeeeeeedeedeeedee 165
                 +++++i++++++ ++e+ e ere   +le e++ +ee+    ++++++d+  ++++ ++ d++ +e++e+
  EPX71715.1 554 DNDNDIIMMEEEALDESEEIERERALQLELEQQRQEEEAagiQKDQNNDR--GQQDGDDVDDDADEKEER 621
                 56778888888887555555666555555555554333322222222222..222222222222222221 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1676 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1395  (0.0778069); expected 358.6 (0.02)
Passed bias filter:                      603  (0.0336327); expected 358.6 (0.02)
Passed Vit filter:                        88  (0.00490825); expected 17.9 (0.001)
Passed Fwd filter:                        30  (0.00167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.31u 0.34s 00:00:01.65 Elapsed: 00:00:00.55
# Mc/sec: 9145.62
//
Query:       EPX71716.1  [L=181]
Description: cation binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.5e-17   62.9   3.3    1.8e-11   44.8   0.2    1.9  2  Hemerythrin  Hemerythrin HHE cation binding domain
  ------ inclusion threshold ------
      0.019   14.0   0.1       0.02   14.0   0.1    1.1  1  WTX          WTX protein


Domain annotation for each model (and alignments):
>> Hemerythrin  Hemerythrin HHE cation binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.8   0.2     2e-15   1.8e-11       3     131 .]       5     122 ..       3     122 .. 0.89
   2 !   25.6   0.4   1.7e-09   1.6e-05       8      98 ..      74     149 ..      73     179 .. 0.74

  Alignments for each domain:
  == domain 1  score: 44.8 bits;  conditional E-value: 2e-15
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHH...CCC.HHHHHHHHHHHHHHHHHHHHHHHHCHTCG CS
  Hemerythrin   3 vealdeeHralrallerlraladaaaevhgalrklaelldelvdeleaHhaaEEellfPlle..drpggravldvlereHdeirelleelrellkgle 98 
                   +++  +Hr+l ++ + + a  da        + + ++ +++v+el++H   EE +++P ++      g+++ +  ++eH++i e l +++    + e
   EPX71716.1   5 SDIIFNDHRELEKQYNNIKASKDA--------DTAIRWRNKFVWELARHSIGEEIVVYPKFAkyLGQPGEEMANKDRNEHQVIKEYLYKFQSMKPNKE 94 
                  578889**********99777776........677788889*********************99999999*********************5555555 PP

                  GSTCHHHHHHHHHHHHHHHHHHHHHHHTHHHHH CS
  Hemerythrin  99 epsaaafaelleeladllreHiakEesilfpll 131
                       +f   +++l++ lr Hi +Ees+ +pll
   EPX71716.1  95 -----EFIPTIDALMANLRKHIQEEESHDYPLL 122
                  .....7************************986 PP

  == domain 2  score: 25.6 bits;  conditional E-value: 1.7e-09
                  HHHHHHHHHHHHHHHHHHHHHHHCCCHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHH.CCC.HHHHHHHHHHHHHHHHHHHHHHHHCHTCG CS
  Hemerythrin   8 eeHralrallerlraladaaaevhgalrklaelldelvdeleaHhaaEEellfPlledrpggravldvlereHdeirelleelrellkgle 98 
                   eH+ +++ l   +++  +        +++  ++d+l++ l++H ++EE + +Plle         +  ++e + +++++e+ ++++ +++
   EPX71716.1  74 NEHQVIKEYLYKFQSMKPN-------KEEFIPTIDALMANLRKHIQEEESHDYPLLE--------SKLNAEESNHLAKVFERTKKFIPTHS 149
                  79*********99999999.......89*****************************........55555556666666666666666665 PP

>> WTX  WTX protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.1   2.3e-06      0.02     299     393 ..      60     158 ..       6     162 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 2.3e-06
                 XXX.XXXXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX............................. CS
         WTX 299 YqG.GGEEMAsPd....evddadlqelWdmlpqteenlgeasealpkahqlaaadevksypetakderlteaekkasqvKrlglskipveaqskeeskp 392
                 Y G  GEEMA  d    +v  ++l ++  m p++ee + +  +  ++ +++ + +e + yp   ++++ +e   + ++v ++  + ip +++++ +skp
  EPX71716.1  60 YLGqPGEEMANKDrnehQVIKEYLYKFQSMKPNKEEFIPTIDALMANLRKHIQEEESHDYPLL-ESKLNAEESNHLAKVFERTKKFIPTHSHPSAPSKP 157
                 66634********777777788999999*********98888888888888888888889887.7777888999999999999999*********9999 PP

                 X CS
         WTX 393 p 393
                 p
  EPX71716.1 158 P 158
                 7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       842  (0.046963); expected 358.6 (0.02)
Passed bias filter:                      512  (0.0285571); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.29s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 1257.63
//
Query:       EPX71717.1  [L=261]
Description: versicolorin reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.9e-56  191.3   0.7    2.2e-56  191.0   0.7    1.0  1  adh_short_C2   Enoyl-(Acyl carrier protein) reductase
    1.6e-50  171.3   1.0      2e-50  171.0   1.0    1.0  1  adh_short      short chain dehydrogenase
      4e-14   52.9   0.6    6.2e-14   52.3   0.6    1.2  1  KR             KR domain
    2.4e-05   23.9   0.1    3.6e-05   23.4   0.1    1.2  1  Epimerase      NAD dependent epimerase/dehydratase family
  ------ inclusion threshold ------
      0.011   15.2   0.1      0.061   12.7   0.1    1.9  2  GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
      0.011   15.6   0.5      0.021   14.7   0.5    1.5  1  3HCDH_N        3-hydroxyacyl-CoA dehydrogenase, NAD binding d


Domain annotation for each model (and alignments):
>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  191.0   0.7   7.5e-60   2.2e-56       3     233 ..      19     258 ..      15     259 .. 0.92

  Alignments for each domain:
  == domain 1  score: 191.0 bits;  conditional E-value: 7.5e-60
                   TTSHHHHHHHHHHHTT-EEEEEESSGGHHHHHHHHHHHTT.....SEE..EE--TTSHHHHHHHHHHHHHHH.SSEEEEEE-----EGCSS-GGGH- CS
  adh_short_C2   3 asgIGraiAkalaeeGaevvltdlneeakkrveelaeelg.....aev..lecDVtdeeqvealveevvekf.gklDilvnnagiapklkgpflets 91 
                    +gIG++iA++la++Ga+v++t+ +e++k+++++l+++++     a++  +++D +d ++ e++v+++v+ f  +++ilvnnag a++  g + +++
    EPX71717.1  19 SRGIGAGIAETLASRGAKVAITYTSESSKESTQKLVNKIKgfgtsADAisIQADLRDLASAEHIVDTTVKAFgPTIHILVNNAGCAKS--GALGTLK 113
                   59***********************************9876765433369**********************779*************..******* PP

                   HHHHHHHHHHHTHHHHHHHHHHHHHCTSC......CEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCTGGGGS CS
  adh_short_C2  92 reefdraldvnlyslfllakaalplmkeg......gsivnlssvgaervvpnynaygaaKaalealtrylAvelgpkgiRvNavspgpikTlaasgi 182
                    +++++++dvn+++++ +++a++ ++ ++      g+i+n+ s++++++v+ +++y+a+Kaa+e++tr++A elgp+g +vN v pg+++T++ +g+
    EPX71717.1 114 LDDYNHIFDVNVRAVLFMSEAVVGHLPKKekdgsgGRIINIGSIAGRIGVARNSIYSASKAAIEGFTRCWASELGPQGHTVNQVNPGAVDTDMLKGF 210
                   ***********************97665557889999********************************************************9999 PP

                   TTHHHHHHHHHHHSTT.SS-B-HHHHHHHHHHHCSGGGTT--SEEEEESTTG CS
  adh_short_C2 183 kgfdelleelearapl.grlgtpeevaeaalfLasdeasyitGqtlvvDgGl 233
                   +g     e+l +++p+ +r+g p+++ae++ fLa d++++itGqt+ + gGl
    EPX71717.1 211 DGR----EALIKMTPFeNRVGLPSDIAEVVSFLAEDRSRWITGQTISASGGL 258
                   854....44555666615688******************************7 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  171.0   1.0   6.7e-54     2e-50       1     189 [.      11     209 ..      11     214 .. 0.94

  Alignments for each domain:
  == domain 1  score: 171.0 bits;  conditional E-value: 6.7e-54
                 SEEEEESTTSHHHHHHHHHHHHTT-EEEE...EESCHHHHHHHHHHHHHT..TSEEEEEE-TTTSHHHHHHHHHHHHHHH.SSESEEEE---SS--SSG CS
   adh_short   1 kvvlvtGassGIGraiakelakeGakvvv...vdrseekleevakelkee..gakalaiqvDvtdreevealvekavkkl.gkldvLvnNAGitgsgpf 93 
                 kv++vtG+s+GIG  ia++la++Gakv++    ++s+e  +++++++k    +a+a+ iq+D++d +++e +v++ vk +  ++++LvnNAG ++sg+ 
  EPX71717.1  11 KVAIVTGGSRGIGAGIAETLASRGAKVAItytSESSKESTQKLVNKIKGFgtSADAISIQADLRDLASAEHIVDTTVKAFgPTIHILVNNAGCAKSGAL 109
                 89*************************9953234567788889999998888889*************************668**************** PP

                 GGCSHHHHHHHHHHHTHHHHHHHHHHHHHHH....HCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHHHH CS
   adh_short  94 selseeewervievNltgvflltravlpaml....kqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdmak 188
                   l+ ++++ +++vN+ +v+ +++av+ ++     ++s+GrI+n++S+ag+ +va  + YsAsKaa++g+tr++a el p+g +vn v+PG+vdTdm k
  EPX71717.1 110 GTLKLDDYNHIFDVNVRAVLFMSEAVVGHLPkkekDGSGGRIINIGSIAGRIGVARNSIYSASKAAIEGFTRCWASELGPQGHTVNQVNPGAVDTDMLK 208
                 *****************************988888999***********************************************************87 PP

                 H CS
   adh_short 189 e 189
                  
  EPX71717.1 209 G 209
                 5 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.3   0.6   2.1e-17   6.2e-14       4     166 ..      14     186 ..      12     198 .. 0.86

  Alignments for each domain:
  == domain 1  score: 52.3 bits;  conditional E-value: 2.1e-17
                 EEETTTSHHHHHHHHHHHHHHS-.EEEEE-SS..--HHHHHHHHHHHHTT-EEEE..----TT-HHHHHHHHHHHHHHS.S---EEEE---------TT CS
          KR   4 litGGlGgLGlelarwlaekgar.hlvllsRsaaadedskaliaelealgaevev..vaaDvsdkdavealleeikaee.ppikGvihaAgvlrdklle 98 
                 ++tGG  g+G  +a++la++ga+  + ++s s  ++e+ ++l+++++  g++ ++  ++aD+ d ++ e+++++  + + p+i+  ++ Ag ++ ++l 
  EPX71717.1  14 IVTGGSRGIGAGIAETLASRGAKvAITYTSES--SKESTQKLVNKIKGFGTSADAisIQADLRDLASAEHIVDTTVKAFgPTIHILVNNAGCAKSGALG 110
                 8********************77145566666..7888889*******998666512689**************999999******************* PP

                 T--HHHHHHHHTTTTHHHHHHHHHTTT........S--SEEEEEEEHHHHH--TT-HHHHHHHHHHHHHHHHHHHH CS
          KR  99 emtaedleqvlapKvkGawnLhelled........esldffvlfSSiagllgsagqanYaaaNaflDalaeyrrsq 166
                 +++ +d+++++   v+++  + e++           s   ++ + Siag +g a  + Y+a  a ++++ + ++s+
  EPX71717.1 111 TLKLDDYNHIFDVNVRAVLFMSEAVVGhlpkkekdGSGGRIINIGSIAGRIGVARNSIYSASKAAIEGFTRCWASE 186
                 *********************9998655555444456668*****************************9988764 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.1   1.2e-08   3.6e-05       2     160 ..      14     187 ..      13     199 .. 0.78

  Alignments for each domain:
  == domain 1  score: 23.4 bits;  conditional E-value: 1.2e-08
                 EEETTTSHHHHHHHHHHHHCTSE.EEEEES-STTTTCHHCHHC..........EEEE--TT-HHHHHHHHHHHT-SEEEE--S---HHHHHHSHHHHHH CS
   Epimerase   2 lVtGatGfiGsalvkallekgye.vigldrlssasntarledl..........elveldltdrsalerlfkeeqpdavihlAavggvaassedpadfie 89 
                 +VtG++  iG+ +++ l+++g +  i+ +++ss++ t++l ++            +++dl+d ++ e +++    ++v  ++   ++ +++     +++
  EPX71717.1  14 IVTGGSRGIGAGIAETLASRGAKvAITYTSESSKESTQKLVNKikgfgtsadaISIQADLRDLASAEHIVD----TTVKAFGPTIHILVNNAG---CAK 105
                 8********************99788888888888888888879**9999999889999999998888888....456666559999997776...777 PP

                 HHTHHHHHHHHHHHHHTCT.EEEEEEEGGGGTSCSS..SS......BSTCSTTS--..--SSHHHHHHHHHHHHHHHHHHHH CS
   Epimerase  90 knlqgtlnlleaarkagvk.rllflsSsevYGkdae..qp......keettltgpl..kpnspYaaaKlageklveayaaqy 160
                 + + gtl+l ++ +  +v+ r + + S +v G  ++  +        +  +  g +  + ns Y+a+K+a+e  ++ +a + 
  EPX71717.1 106 SGALGTLKLDDYNHIFDVNvRAVLFMSEAVVGHLPKkeKDgsggriINIGSIAGRIgvARNSIYSASKAAIEGFTRCWASEL 187
                 *********9998877666688888899****55553211333444344444556677*************99988887765 PP

>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   2.1e-05     0.061       2      73 ..      15      85 ..      14     133 .. 0.85
   2 ?    0.3   0.0      0.12   3.5e+02     150     170 ..     166     186 ..     161     198 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 2.1e-05
                   EETTTSHHHHHHHHHHHHCT-CCEEEEEEESS.-TTHHHHHCTTT...TTGCCEEEEE--TT-HHHHHHHHHH CS
  GDP_Man_Dehyd  2 iTGiaGfiGsylaelLlekgyevhgivrrsss.fntgriehlakdpkeeleenlklhkgDltDssslerllae 73
                   +TG++  iG+ +ae L ++g +v ++   +ss  +t+++ +  k   + ++ +   +++Dl+D +s e++++ 
     EPX71717.1 15 VTGGSRGIGAGIAETLASRGAKVAITYTSESSkESTQKLVNKIK--GFGTSADAISIQADLRDLASAEHIVDT 85
                   9****9*****************998775544056666665544..5667789999**********9999976 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.12
                    -SHHHHHHHHHHHHHHHHHHH CS
  GDP_Man_Dehyd 150 rsPYaaaKlyadwivvnyrea 170
                    +s Y+a+K++ + +++ +  +
     EPX71717.1 166 NSIYSASKAAIEGFTRCWASE 186
                    799*******99999887665 PP

>> 3HCDH_N  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.5     7e-06     0.021       1      44 [.      11      56 ..      11      91 .. 0.70

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 7e-06
                EEEEE--SC..CHHHHHHHHHHTT-EEEEE-S-HHHHHHHHHHHHH CS
     3HCDH_N  1 kvaviGaGt..mGagiaavfasagleVvlvdiseealekalekiek 44
                kva++  G   +Gagia+ +as+g +V ++ +se++ e+ ++ ++k
  EPX71717.1 11 KVAIVTGGSrgIGAGIAETLASRGAKVAITYTSESSKESTQKLVNK 56
                577776665449*******************999888877777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       518  (0.0288917); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1927.51
//
Query:       EPX71718.1  [L=225]
Description: versicolorin reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.2e-47  160.1   0.5    4.8e-47  160.0   0.5    1.0  1  adh_short       short chain dehydrogenase
    1.1e-43  149.4   0.2    1.4e-43  149.1   0.2    1.0  1  adh_short_C2    Enoyl-(Acyl carrier protein) reductase
    1.8e-08   34.5   0.1    2.3e-08   34.2   0.1    1.1  1  KR              KR domain
     0.0014   18.0   0.2     0.0022   17.4   0.2    1.2  1  2-Hacid_dh_C    D-isomer specific 2-hydroxyacid dehydrogenase
  ------ inclusion threshold ------
      0.016   14.6   0.1      0.018   14.5   0.1    1.2  1  GDP_Man_Dehyd   GDP-mannose 4,6 dehydratase
      0.018   13.8   0.0      0.032   13.0   0.0    1.4  1  Oxidored_nitro  Nitrogenase component 1 type Oxidoreductase
      0.069   12.6   0.0       0.08   12.4   0.0    1.2  1  Epimerase       NAD dependent epimerase/dehydratase family


Domain annotation for each model (and alignments):
>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  160.0   0.5   1.9e-50   4.8e-47       1     191 [.      11     207 ..      11     211 .. 0.93

  Alignments for each domain:
  == domain 1  score: 160.0 bits;  conditional E-value: 1.9e-50
                 SEEEEESTTSHHHHHHHHHHHHTT-EEEE...EESCHHHHHHHHHHHHHT..TSEEEEEE-TTTSHHHHHHHHHHHHHHH.SSESEEEE---S.S--SS CS
   adh_short   1 kvvlvtGassGIGraiakelakeGakvvv...vdrseekleevakelkee..gakalaiqvDvtdreevealvekavkkl.gkldvLvnNAGi.tgsgp 92 
                 kv++vtG+s+GIG aia++la+ Gakv++    d+s+e  e+++k++k     a+a+ iq+D++d ++++ +v+  +  +  ++++LvnNAG+  + ++
  EPX71718.1  11 KVAIVTGGSRGIGAAIAETLASCGAKVAItytSDSSKEVTEKLVKKIKGFnaPADAIEIQADLRDTKSAKHIVNVTRIAFgRTIHILVNNAGVsYQGSS 109
                 89*************************9964447788889999999998877788999**********************667**********877888 PP

                 GGGCSHHHHHHHHHHHTHHHHHHHHHHHHHHHHCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHHHHHHC CS
   adh_short  93 fselseeewervievNltgvflltravlpamlkqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdmakelr 191
                 + ++s ++++++++vN+ ++fl+ +av+p +  +++GrI+n++S+agk p  +++ ++AsKaa++g+tr++a el p+g +vn v+PG+vdTdm +++ 
  EPX71718.1 110 IGSTSIDDYNSIFDVNVRAAFLMGEAVAPLLP-SEGGRIINIGSIAGKIPISHLPLFCASKAALEGFTRCWAAELGPKGHTVNQVNPGAVDTDMIAKSG 207
                 99999999**********************66.9************************************************************98865 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.1   0.2   5.6e-47   1.4e-43       3     182 ..      19     206 ..      15     221 .. 0.91

  Alignments for each domain:
  == domain 1  score: 149.1 bits;  conditional E-value: 5.6e-47
                   TTSHHHHHHHHHHHTT-EEEEEESSGGHHHHHHHHHHHTT.....SEE..EE--TTSHHHHHHHHHHHHHHH.SSEEEEEE-----EGCSS-GGGH- CS
  adh_short_C2   3 asgIGraiAkalaeeGaevvltdlneeakkrveelaeelg.....aev..lecDVtdeeqvealveevvekf.gklDilvnnagiapklkgpflets 91 
                    +gIG+aiA++la+ Ga+v++t+ ++++k+ +e+l+++++     a++  +++D +d+++ +++v+ ++  f  +++ilvnnag++ +  +++ +ts
    EPX71718.1  19 SRGIGAAIAETLASCGAKVAITYTSDSSKEVTEKLVKKIKgfnapADAieIQADLRDTKSAKHIVNVTRIAFgRTIHILVNNAGVSYQ-GSSIGSTS 114
                   59************************************98775443336***********************667*************.999***** PP

                   HHHHHHHHHHHTHHHHHHHHHHHH.HCTSCCEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCTGGGGS CS
  adh_short_C2  92 reefdraldvnlyslfllakaalp.lmkeggsivnlssvgaervvpnynaygaaKaalealtrylAvelgpkgiRvNavspgpikTlaasgi 182
                    ++++ ++dvn++++fl+ +a++p l  egg+i+n+ s+++++ +++    +a+Kaale++tr++A+elgpkg +vN v pg+++T++ ++ 
    EPX71718.1 115 IDDYNSIFDVNVRAAFLMGEAVAPlLPSEGGRIINIGSIAGKIPISHLPLFCASKAALEGFTRCWAAELGPKGHTVNQVNPGAVDTDMIAKS 206
                   ************************444577**********************************************************6554 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   0.1   8.8e-12   2.3e-08       4     163 ..      14     179 ..      12     193 .. 0.82

  Alignments for each domain:
  == domain 1  score: 34.2 bits;  conditional E-value: 8.8e-12
                 EEETTTSHHHHHHHHHHHHHHS-E.EEEE-SS..--HHHHHHHHHHHHTT-..EEEE----TT-HHHHHHHHHHHHHHS.S---EEEE------.---T CS
          KR   4 litGGlGgLGlelarwlaekgarh.lvllsRsaaadedskaliaelealga..evevvaaDvsdkdavealleeikaee.ppikGvihaAgvlr.dkll 97 
                 ++tGG  g+G ++a++la+ ga+  + ++s s  ++e  ++l+++++  +a  +   ++aD+ d ++ +++++  +  + ++i+  ++ Agv+   + +
  EPX71718.1  14 IVTGGSRGIGAAIAETLASCGAKVaITYTSDS--SKEVTEKLVKKIKGFNApaDAIEIQADLRDTKSAKHIVNVTRIAFgRTIHILVNNAGVSYqGSSI 110
                 8********************77515555555..7888899******9987335556789***************99999***********98615789 PP

                 TT--HHHHHHHHTTTTHHHHHHHHHTTT...S--SEEEEEEEHHHHH--TT-HHHHHHHHHHHHHHHHH CS
          KR  98 eemtaedleqvlapKvkGawnLhelled...esldffvlfSSiagllgsagqanYaaaNaflDalaeyr 163
                  +++ +d+++++   v++a  + e++++   ++   ++ + Siag +   +   + a  a l+++ + +
  EPX71718.1 111 GSTSIDDYNSIFDVNVRAAFLMGEAVAPllpSEGGRIINIGSIAGKIPISHLPLFCASKAALEGFTRCW 179
                 9*********************99998876677778888888888887777777777777777777665 PP

>> 2-Hacid_dh_C  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.2   8.4e-07    0.0022      38     127 ..      11     101 ..       4     104 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 8.4e-07
                   EEEEES-SH..HHHHHHHHHHHTT-EEEEESSSHHHHHCHHHHTCEECSHHHHHHH-SEEEE-S--..STTTTTSBSHHHHHCSTTTEEEEESS CS
  2-Hacid_dh_C  38 tvGiiGlGr..IGqavakrlkafgmkviaydrskkkeeeeeelgvelvsleellaesDivslhlpl..tpetrhlinaeelakmkkgailiNta 127
                   +v+i+  G+  IG a+a++l++ g+kv ++ +s +++e + e    + +++ + a +D + + + l  t++ +h++n +++a  +   il+N a
    EPX71718.1  11 KVAIVTGGSrgIGAAIAETLASCGAKVAITYTSDSSKE-VTE--KLVKKIKGFNAPADAIEIQADLrdTKSAKHIVNVTRIAFGRTIHILVNNA 101
                   44555444334****************99988877555.333..2356999999999*99999886337899**********999999999976 PP

>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.1     7e-06     0.018       2      76 ..      15      88 ..      14     136 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 7e-06
                   EETTTSHHHHHHHHHHHHCT-CCEEEEEEESS-T.THHHHHCTTT...TTGCCEEEEE--TT-HHHHHHHHHHHT- CS
  GDP_Man_Dehyd  2 iTGiaGfiGsylaelLlekgyevhgivrrsssfn.tgriehlakdpkeeleenlklhkgDltDssslerllaevqp 76
                   +TG++  iG+ +ae L + g +v ++   +ss + t+++ +  k + +++  +   +++Dl+D++s +++++ +++
     EPX71718.1 15 VTGGSRGIGAAIAETLASCGAKVAITYTSDSSKEvTEKLVK--KIKGFNAPADAIEIQADLRDTKSAKHIVNVTRI 88
                   9****9*****************999887777651344433..33455666688889*************998765 PP

>> Oxidored_nitro  Nitrogenase component 1 type Oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   1.3e-05     0.032     272     336 ..      10      78 ..       4      93 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.3e-05
                     T-EEEEECSS..HHHHHHHHHHHHHT-EEEEEEESSS-HHHHHHHHHHS.TT....SEEEES.CHHHHHH CS
  Oxidored_nitro 272 gkrvaiygdp..drvvalarllkelGmevvaagtetahrddeerlkaeleeg...epeviddadleelee 336
                     + +vai++++   +  a+a+ l+ +G++v+ + t+++++++ e+l +++++    ++ + ++adl+++++
      EPX71718.1  10 N-KVAIVTGGsrGIGAAIAETLASCGAKVAITYTSDSSKEVTEKLVKKIKGFnapADAIEIQADLRDTKS 78 
                     4.566666661455667899***************************99999888668888888887765 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   3.1e-05      0.08       2      60 ..      14      83 ..      13     151 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 3.1e-05
                EEETTTSHHHHHHHHHHHHCTSE.EEEEES-STTTTCHHCHHC..........EEEE--TT-HHHHHHHH CS
   Epimerase  2 lVtGatGfiGsalvkallekgye.vigldrlssasntarledl..........elveldltdrsalerlf 60
                +VtG++  iG+a+++ l++ g +  i+ +++ss++ t++l ++            +++dl+d ++ + ++
  EPX71718.1 14 IVTGGSRGIGAAIAETLASCGAKvAITYTSDSSKEVTEKLVKKikgfnapadaIEIQADLRDTKSAKHIV 83
                8********************9977888888888888877777899999998877888888888665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       460  (0.0256568); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1644.54
//
Query:       EPX71719.1  [L=422]
Description: nitric oxide dioxygenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.1e-10   39.1   0.0    1.4e-09   38.2   0.0    1.5  1  FAD_binding_6  Oxidoreductase FAD-binding domain
    3.4e-09   37.2   0.0    1.7e-08   35.0   0.0    2.1  1  Globin         Globin
    5.6e-07   30.2   0.0    1.6e-06   28.7   0.0    1.8  2  NAD_binding_1  Oxidoreductase NAD-binding domain
     0.0005   20.2   0.2     0.0014   18.7   0.0    1.8  2  NAD_binding_6  Ferric reductase NAD binding domain
  ------ inclusion threshold ------
       0.11   12.4   0.0       0.22   11.4   0.0    1.6  1  Protoglobin    Protoglobin


Domain annotation for each model (and alignments):
>> FAD_binding_6  Oxidoreductase FAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.2   0.0   3.9e-13   1.4e-09       3      99 .]     178     279 ..     176     279 .. 0.83

  Alignments for each domain:
  == domain 1  score: 38.2 bits;  conditional E-value: 3.9e-13
                    EEEEEEECCTTEEEEEEEESTTTS--.---TT-EEEEEECET..TCCEEEEEE.BSSTT.ECCEEEEEEE--TT-HHHHHH.HCS-TT-EEEEEEE CS
  FAD_binding_6   3 kltekeevsedtrifrfklpsekqkl.glpvGqhvflrlkik..geaviRsYtpissen.ekGelellvkvypgGkmsqaL.delkigdtleikGP 93 
                    ++++ ++ s d++ + ++  +++ k+   ++Gq++ +  ki+   ++ +R Y++  +++ +++   + v+++++G++s++   +lk gd + ++ P
     EPX71719.1 178 EVVKLTDESLDVKSVYLAPRNKEFKIaSAYPGQYITVAWKIPelPHETLREYSLSKHPDtQHNMYRISVRRIKDGVVSNYVhGKLKKGDLVGVSPP 273
                    5667777788888888876666555425678*********76334679*****99999659999*****************777************ PP

                    E-SEEC CS
  FAD_binding_6  94 lGkfeY 99 
                    +G+f+Y
     EPX71719.1 274 VGNFKY 279
                    ****99 PP

>> Globin  Globin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.0   0.0   4.6e-12   1.7e-08       1     110 []      30     127 ..      30     127 .. 0.89

  Alignments for each domain:
  == domain 1  score: 35.0 bits;  conditional E-value: 4.6e-12
                 HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSGGGGGGSTTTTTTT-HHHHCTSHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHCSTT--H CS
      Globin   1 dkalvkaswekvkanaeelgaeilkrlFkaypdtkklFkkfgdlssaedlksspkfkahakkvlaalgeavknldndealkaalkklaarHaergkvdp 99 
                 +k+ +++s + +++n  +l+++++k+++++yp+++ +F+k++  s      s p++ a       al +++kn+d+ + l ++++++  +H+  + +++
  EPX71719.1  30 QKQYIRSSIPILESNGVDLTKNFYKKMLENYPEVRPYFNKAHQTS-----LSQPRILAF------ALLNYAKNIDDLAPLSGFIDQIVMKHVGLQ-IKA 116
                 78899**********************************995545.....555555554......5779999999999*****************.*** PP

                 HHHHHHHHHHH CS
      Globin 100 anFklfgeall 110
                 ++++++g++ll
  EPX71719.1 117 EHYPIVGNCLL 127
                 *********96 PP

>> NAD_binding_1  Oxidoreductase NAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0         5   1.8e+04       9      21 ..      96     108 ..      92     129 .. 0.64
   2 !   28.7   0.0   4.6e-10   1.6e-06       3     108 ..     294     399 ..     293     400 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 5
                    HHHHHHHHHHHHH CS
  NAD_binding_1   9 aPvrsvlrailee 21 
                    aP+ +++++i+++
     EPX71719.1  96 APLSGFIDQIVMK 108
                    5666666666654 PP

  == domain 2  score: 28.7 bits;  conditional E-value: 4.6e-10
                    EEGGGGHHHHHHHHHHHHHCTTCSEEEEEEEESSGCGSTTHHHHHHHHHHCTTEEEEEEEESSCTTTSSSEESSHHHHHHHHHHH......HSSTT CS
  NAD_binding_1   3 agGtGiaPvrsvlraileeakdktkvvlvyGnrteedllyreeleelakklpgrlkvvavvsreeagweggkgrvqdalleells......lkkee 92 
                    agG Gi+P+ s+++++l +    + vv+ + nrt  +  +++ l ++++++++++k+ ++ s+e       k  v d+l+  +l+      l +++
     EPX71719.1 294 AGGIGITPIISIIETALLD---GRMVVFCFSNRTYTSRPFKDWLLQIKEEYKDQIKLKEFFSQETHVR---KEEVIDELMTRVLNrtdiekLISAD 383
                    9*****************7...789***********************************66555544...66666666666666677778679** PP

                    EEEEEECSHHHHHHHH CS
  NAD_binding_1  93 thvyvCGppgMikavr 108
                    +++y+ Gp   +++++
     EPX71719.1 384 CDIYMLGPNSYMRFIK 399
                    ********99999876 PP

>> NAD_binding_6  Ferric reductase NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1       1.2   4.4e+03     100     129 ..      31      71 ..       6      79 .. 0.63
   2 !   18.7   0.0     4e-07    0.0014       4      84 ..     290     361 ..     289     399 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1.2
                    x............xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  NAD_binding_6 100 k............qgvdavsgtrnvkihfgRPnlkevlkdia 129
                    k            +gvd   +   +k+ +  P+++ ++++++
     EPX71719.1  31 KqyirssipilesNGVDLTKNFY-KKMLENYPEVRPYFNKAH 71 
                    13455556666667777777777.888888888888888873 PP

  == domain 2  score: 18.7 bits;  conditional E-value: 4e-07
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  NAD_binding_6   4 vllvagGiGitpfisilkdllkkskkealktkkikliwvvressslewfkdvLneleeeksegnieihiYlTseyeaedas 84 
                    +l  agGiGitp+isi+   l   +       ++ + +++r + s   fkd L +++ee +  +i+++ ++++e+ + +++
     EPX71719.1 290 ILCFAGGIGITPIISIIETALLDGR-------MVVFCFSNRTYTS-RPFKDWLLQIKEEYKD-QIKLKEFFSQETHVRKEE 361
                    5778*************99887775.......999******9988.568889999*999999.**********99985443 PP

>> Protoglobin  Protoglobin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0     6e-05      0.22       5      58 ..      17      71 ..      13     140 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 6e-05
                 HHHHHHHTT-SHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCTS.HHHHHHHCHHC CS
  Protoglobin  5 layllsflglteedlaaLralapliealipavvdafYekllsf.petarifetss 58
                 l+ + ++  l++++ +++r+  p++e +  +++++fY+k+l+  pe + +f+   
   EPX71719.1 17 LTTQYQLKVLNDSQKQYIRSSIPILESNGVDLTKNFYKKMLENyPEVRPYFNKAH 71
                 555566666899***************************98765******99833 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (422 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       757  (0.0422221); expected 358.6 (0.02)
Passed bias filter:                      606  (0.0338); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.44
# Mc/sec: 2894.77
//
Query:       EPX71720.1  [L=926]
Description: transcription factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-08   33.3   1.0    7.3e-08   32.1   1.0    1.7  1  LisH      LisH


Domain annotation for each model (and alignments):
>> LisH  LisH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.1   1.0   4.1e-12   7.3e-08       2      27 .]      33      58 ..      32      58 .. 0.95

  Alignments for each domain:
  == domain 1  score: 32.1 bits;  conditional E-value: 4.1e-12
                HHHHHHHHHHHHCT-HHHHHHHHHHT CS
        LisH  2 eLNrLIydYLvkeGyeetAeaFekEa 27
                 L+++IydY+vk+ ++etA+aF kE+
  EPX71720.1 33 SLDYYIYDYFVKHRFQETAKAFYKES 58
                59**********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (926 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       979  (0.0546043); expected 358.6 (0.02)
Passed bias filter:                      283  (0.0157845); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.72u 0.31s 00:00:01.03 Elapsed: 00:00:00.50
# Mc/sec: 5615.09
//
Query:       EPX71721.1  [L=100]
Description: ATPase inhibitor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.3e-10   38.8   0.1      1e-09   38.7   0.1    1.1  1  IATP      Mitochondrial ATPase inhibitor, IATP
  ------ inclusion threshold ------
       0.12   12.4   0.0       0.19   11.8   0.0    1.2  1  DUF1816   Domain of unknown function (DUF1816)


Domain annotation for each model (and alignments):
>> IATP  Mitochondrial ATPase inhibitor, IATP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.7   0.1   1.1e-13     1e-09      22      94 ..      23      92 ..       1      94 [. 0.81

  Alignments for each domain:
  == domain 1  score: 38.7 bits;  conditional E-value: 1.1e-13
        IATP 22 svaarrmgEgdsGapkgtGggGsireagdafgkrEaAsEeeyirqrekekLaeLkeklaeqkeHleeleeHie 94
                 + a++ ++gds  p  + +     ++ ++f+kr +A+E+++i+  e ++L++Lke+l+ ++e l++le+ i+
  EPX71721.1 23 RTMASNNSDGDSTDPTLSNA---TSSREGPFSKRGKAKENQFIHDLELDQLKKLKEQLKSHRENLDKLETEID 92
                45566667777777777666...78999****************************************99887 PP

>> DUF1816  Domain of unknown function (DUF1816)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.1e-05      0.19      24      59 ..      48      81 ..      48      87 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.1e-05
     DUF1816 24 GPFlsekeaeaaksgYleDLesEgaqgikvkikrck 59
                GPF+++ +a+++  +++ DLe ++ +++k ++k  +
  EPX71721.1 48 GPFSKRGKAKEN--QFIHDLELDQLKKLKEQLKSHR 81
                9**999998875..6*************99998665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1726  (0.0962686); expected 358.6 (0.02)
Passed bias filter:                      878  (0.0489709); expected 358.6 (0.02)
Passed Vit filter:                        91  (0.00507558); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.34s 00:00:00.93 Elapsed: 00:00:00.54
# Mc/sec: 556.99
//
Query:       EPX71722.1  [L=214]
Description: hypothetical protein SOCG_03658 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-06   28.4   0.1    9.9e-06   25.7   0.0    2.1  2  Acetyltransf_9   Acetyltransferase (GNAT) domain
    2.1e-05   24.7   0.0    3.2e-05   24.1   0.0    1.4  1  Acetyltransf_1   Acetyltransferase (GNAT) family
    2.3e-05   24.3   0.0    3.4e-05   23.8   0.0    1.2  1  Acetyltransf_10  Acetyltransferase (GNAT) domain


Domain annotation for each model (and alignments):
>> Acetyltransf_9  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0      0.14   8.6e+02       4      28 ..       5      29 ..       2      54 .. 0.65
   2 !   25.7   0.0   1.6e-09   9.9e-06      67     127 ..     123     185 ..     118     186 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.14
                    EE-GGGHHHHHHHHHHHTT----H. CS
  Acetyltransf_9  4 elteedldevlellkyaFqdeespl 28
                    +++ +d++ v+ +l++aF +++ +l
      EPX71722.1  5 KVELKDYKRVATVLAAAFYHDPVHL 29
                    6777888889999999998777665 PP

  == domain 2  score: 25.7 bits;  conditional E-value: 1.6e-09
                     TTEEEEEEEEEEEEE-CCGTTS-HHHHHHHHHHHHHHHTT--EEE..E--SSHHHHHTTT-EE CS
  Acetyltransf_9  67 pGktlkaagvtgVavapehrgrgvlskLlaraleemreegqplsl..lfPssipiYrrfGyei 127
                      G+t +  +++ V+v+ ++rg+g+l++L++  l+ +++++ p  l   +P ++p Y++fG+++
      EPX71722.1 123 AGRTHNFWYLMFVGVKENKRGKGYLRSLIQPILKIADQNNLPCYLesTHPNNRPRYEHFGFNV 185
                     78999999*******************************99976522788***********87 PP

>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.0   5.3e-09   3.2e-05      58     117 .]     127     183 ..      80     183 .. 0.89

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 5.3e-09
                     TTEEEEEEEEESGGGTTSSHHHHHHHHHHHHHHHTTESEEEE.EEETTEHHHHHHHHHTTE CS
  Acetyltransf_1  58 ggvayieslaVspeyrgkGlGsaLlealeerareegikkivl.aveedndaairlYeklGF 117
                      + +y+ ++ V+++ rgkG+ + L++ ++++a ++++   +l  ++++n   ++ Ye +GF
      EPX71722.1 127 HNFWYLMFVGVKENKRGKGYLRSLIQPILKIADQNNLPC-YLeSTHPNN---RPRYEHFGF 183
                     3789*******************************9988.994444446...****99**9 PP

>> Acetyltransf_10  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.0   5.7e-09   3.4e-05      49     124 ..     127     201 ..     116     204 .. 0.85

  Alignments for each domain:
  == domain 1  score: 23.8 bits;  conditional E-value: 5.7e-09
  Acetyltransf_10  49 rdgshisllfVdpeyrgqGigkaLleaveeeaekdgikleltvnasp.yavpfYeklGFkavgeeqeenGirfvpMe 124
                       + +++  + V+++ rg+G+ ++L++ +++ a+++ +     +++++ + +p Ye++GF +v+++  ++G+  +p  
       EPX71722.1 127 HNFWYLMFVGVKENKRGKGYLRSLIQPILKIADQN-NL-PCYLESTHpNNRPRYEHFGFNVVQSVHIKEGLDSIPID 201
                      44557778889*********************555.34.899999988**********************9998865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       257  (0.0143343); expected 358.6 (0.02)
Passed bias filter:                      251  (0.0139997); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.47
# Mc/sec: 1363.61
//
Query:       EPX71723.1  [L=494]
Description: proline dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-57  195.6   0.0    1.7e-57  195.2   0.0    1.1  1  Pro_dh    Proline dehydrogenase


Domain annotation for each model (and alignments):
>> Pro_dh  Proline dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  195.2   0.0   9.6e-62   1.7e-57      31     293 ..     174     476 ..     158     479 .. 0.83

  Alignments for each domain:
  == domain 1  score: 195.2 bits;  conditional E-value: 9.6e-62
                 HHHHHHHHHHHHHHHHHHCCS-TTCC-SEEE-GGG..............................TT-SGGGHHHH.HHHHHHHHHHHHHHHHHTT-EE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..............................xxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxx RF
      Pro_dh  31 dryleayleaiksiekaskalkvleapgvsvklsa..............................prletaeeeev.meelverlrtlakeakelgvrl 98 
                 ++ +++yl +i+ ++k+++         +++kl+                               ++ +  ++e+  ++++ +  ++l++ a+++gv l
  EPX71723.1 174 QEAFDSYLYSIDLASKVEN-------STCAIKLTPfinplvlfrfnailnnsanqpaakftemlnDNPSFSSYEQDeLRRFWSFSEKLCEYAQKKGVLL 265
                 4555555555555555544.......33344444444333333333377666665554444455525555555555599999***************** PP

                 EE----GGGHH....HHHHHHHHHHHSCCTTT---EEEEEETTBTTHHHHHHHHHHHHHHTTS-EEEEEE--S-HHHHHHHHHHTT-S-SB-SSHHHHH CS
                 xxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      Pro_dh  99 liDaEeaklqe....ltlelfrklnkepelkdwevvgntyQaYlkdalevlqkllelAeregfrlgvkLVrGAYldsErkraqelgyespifdtkeeTD 193
                 +iDaE++++q+    ++l+l++k+n+++++     v ntyQ Ylk+++  l+++++++  e++ +g+k+VrGAY++sE++        ++i+d+ke+TD
  EPX71723.1 266 FIDAEQTYFQDtihsISLDLMKKFNQQEAI-----VHNTYQLYLKKTKGILNEHMKQSALENWLMGAKIVRGAYINSEPR--------HLIHDRKEDTD 351
                 **************************9999.....*********************************************........9********** PP

                 HHHHHHHHHHH...................HTTTTEEEEEE-S-HHHHHHHHHHHHHT..T--GGGEEEEEETTSSHHHHHHH......HHTTS-EEEE CS
                 xxxxxxxxxxx...................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxx RF
      Pro_dh 194 anYdavaelll...................enrdeiypavAsHNaesvakalalaeelgqekeksevefqqLlGMadnlsfal......akagynvrkY 267
                 ++Y+a++e+l+                   +++ + ++++A+HN+ sv+k+l l+e+++++  k+++ ++qLlGM+d++++al      +  +++v kY
  EPX71723.1 352 RDYNAAMESLFlgasraapgnkgasqipskSRQGKWGIMIATHNKSSVCKVLDLLEKKKIDTSKTSLYIAQLLGMSDDITYALtdyprgEIPEFHVAKY 450
                 ***********9999999999988888876666799999********************************************766654444577**** PP

                 EEECEHHHHHHHHHHHHHHHH-TT-H CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx RF
      Pro_dh 268 lPvGpveevlpYLvRRleENtanssf 293
                 + +Gp+ +vlpYLvRR+ EN  ++++
  EPX71723.1 451 VSWGPIYQVLPYLVRRARENIGALER 476
                 ********************877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (494 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       602  (0.0335769); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 3381.78
//
Query:       EPX71724.1  [L=156]
Description: hypothetical protein SOCG_03660 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-08   33.5   0.9    9.9e-06   25.4   0.7    3.0  2  TFB6      Subunit 11 of the general transcription factor TFII


Domain annotation for each model (and alignments):
>> TFB6  Subunit 11 of the general transcription factor TFIIH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.7   5.5e-10   9.9e-06       1     113 [.      35     133 ..      35     136 .. 0.79
   2 !    3.5   0.0    0.0029        53     151     169 ..     135     153 ..     131     155 .. 0.86

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 5.5e-10
        TFB6   1 GYeslkellkdldklvdvl...WvSgtpslqipyLlniaselldylekfppspratfklLrkLDkiFasLlaGeDvetgetlpGfeeglragmstTdkV 96 
                 G++sl++l++d++   +vl    +    +l i+  l+  + +ld + +fpp+p+a+f+ ++ LD++  ++++           G+       +stTd++
  EPX71724.1  35 GFQSLENLIHDIEPYFQVLsamPMQRDSFLAINATLRGLDFFLDAIVAFPPAPAAMFQAFSLLDSLCLKIVQS----------GN-------LSTTDAI 116
                 8999********98777760002233344445555555566788899**********************9954..........55.......9****** PP

        TFB6  97 RlksivertRvlvvevl 113
                 Rlks+ e++R++v++ l
  EPX71724.1 117 RLKSLMENSRMVVISKL 133
                 ************99765 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.0029
        TFB6 151 edeelemevarvYektlek 169
                 + +++e+e + v+ektl++
  EPX71724.1 135 DIQGYELECSSVFEKTLND 153
                 67899************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       590  (0.0329076); expected 358.6 (0.02)
Passed bias filter:                      494  (0.0275531); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 1097.64
//
Query:       EPX71725.1  [L=274]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-28   99.2   0.0      7e-28   97.2   0.0    1.8  2  NT-C2     N-terminal C2 in EEIG1 and EHBP1 proteins


Domain annotation for each model (and alignments):
>> NT-C2  N-terminal C2 in EEIG1 and EHBP1 proteins
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.2   0.0   3.9e-32     7e-28       1     146 []       7     148 ..       7     148 .. 0.93
   2 ?   -0.5   0.0      0.05     9e+02      64      92 ..     206     232 ..     200     238 .. 0.80

  Alignments for each domain:
  == domain 1  score: 97.2 bits;  conditional E-value: 3.9e-32
       NT-C2   1 kkkrpkflldlkihelsnipqssgelyvkwrrkdskgtsssgttekakvqngraewneelkipvtlflnkkgkkfeeKllelsvysvlskskkkkelGk 99 
                 k +rp f++ lki++lsnip+++g  ++kw++    + +ssg+t+  +v +++++w +  +i v++ + + +++++e++l +++ys ++ s  ++ lG+
  EPX71725.1   7 KTRRPTFEVHLKIQDLSNIPLVTGLAFIKWNLDGVHTRESSGQTKWEPVLEHKVVWVYDTTIAVRFVI-DQTNTLRERFLNFQIYSDSHSSSGIVRLGS 104
                 679***************************988877777*****************************.55667*************86666669**** PP

       NT-C2 100 velnlaeyvnedeepttsrfllkkskkvnsilslsiqlkllrgdydd 146
                 +++nlaeyv     ++++++ll +s k n++l + i lk+l+g +d+
  EPX71725.1 105 LKINLAEYVG--VGMDSRKYLLSDS-KINATLRIGIGLKQLSGANDF 148
                 **********..67***********.***************998775 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.05
       NT-C2  64 vtlflnkkgkkfeeKllelsvysvlsksk 92 
                  t+  + k++k++ K ++ ++++   +s+
  EPX71725.1 206 STFHMHTKNNKYDTKQIVDDIFFG--GSG 232
                 67888899999****999888887..555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (274 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       375  (0.0209158); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1988.09
//
Query:       EPX71726.1  [L=1504]
Description: THADA protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.2e-65  219.2   0.0      1e-64  218.4   0.0    1.4  1  DUF2428   Putative death-receptor fusion protein (DUF2428)
  ------ inclusion threshold ------
        0.2   12.1   0.0       0.52   10.8   0.0    1.7  1  Ntox35    Bacterial toxin 35


Domain annotation for each model (and alignments):
>> DUF2428  Putative death-receptor fusion protein (DUF2428)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  218.4   0.0   1.2e-68     1e-64       3     274 ..     627     869 ..     625     870 .. 0.91

  Alignments for each domain:
  == domain 1  score: 218.4 bits;  conditional E-value: 1.2e-68
     DUF2428   3 verllelcerisevvlpvvsssspegllpedldseeesaeeeeeeeeeeeeekkekeekkkvtaqvvlvccWrsmKevslllgtllqklplqtekessd 101
                 + ++l+l+e+++ +v+++++++speg+lp+ ++++  s          e+ e        ++ aq++l+++Wrs+Ke+s ll+ +l k +  + +    
  EPX71726.1 627 IIEILQLSESVWLLVKDILCDDSPEGNLPKGQEDSGVS----------ENLE--------DTPAQLILSYSWRSIKEISSLLSMILIKCNSFYPD---- 703
                 6689**************************99975442..........1221........3567**********************665555543.... PP

     DUF2428 102 ssglltveqleeigelfleqLlelrHrGAfekayvgFtklcerllrskdeelqklpeqwleelleeikssssklcitRRSAGlPfliqallssepkksk 200
                    +++ + l + g l++++L e+rHrGAf+++y++F+++c+ l+  kde+l+++p  wl++ ++ i+  ++++ itRRS G+Pf i+++l + ++k +
  EPX71726.1 704 ---VFEYSSLDHYGFLMMSWLWEIRHRGAFTSVYPCFVSYCSFLFAMKDETLSRMPIPWLQKNIDVIQ--EKSSFITRRSGGIPFSITGILVAGKEK-N 796
                 ...89999************************************************************..***********************9999.7 PP

     DUF2428 201 kklLkrtmkeLlelakkeaseeesesddesdlpqvhalNiLralfrdsrLgeevspyvadglilaiegfsspvW 274
                 k lL +t+ +L++lak++ + + +++  + +lpqvha+N L+++f+++rL++ + +y+++++ laiegfs++ W
  EPX71726.1 797 KALLSKTILTLIDLAKEKINVA-DSDAGKVELPQVHAMNSLKTIFTEHRLSSVSLEYLEPAIALAIEGFSHELW 869
                 89**************876666.445589********************************************* PP

>> Ntox35  Bacterial toxin 35
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   5.8e-05      0.52      13      67 ..     554     609 ..     548     614 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 5.8e-05
      Ntox35  13 kHaweklvkknnwkdvkkivvkvmkegkeeaiksakqk..vtkikGkeievtaiakd 67 
                 +H  ekl+++n+ k++   +   ++ ++e a+ks  q+   + i+G+ i+  ++ ++
  EPX71726.1 554 NHFMEKLQPGNTYKNIR-TILDLLQGNVEAARKSLLQAavSYPIQGYLIQLSYTFSG 609
                 8****************.77789***********9999667889*****99998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1504 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       513  (0.0286129); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.87u 0.28s 00:00:01.14 Elapsed: 00:00:00.46
# Mc/sec: 9834.35
//
Query:       EPX71727.1  [L=579]
Description: ATP-dependent RNA helicase Dbp9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-41  142.4   0.2    2.2e-41  141.5   0.2    1.4  1  DEAD             DEAD/DEAH box helicase
    1.3e-29  102.8   0.6    3.7e-29  101.3   0.1    2.1  2  Helicase_C       Helicase conserved C-terminal domain
     0.0006   19.8   0.0     0.0006   19.8   0.0    2.3  2  ResIII           Type III restriction enzyme, res subunit
  ------ inclusion threshold ------
      0.055   13.7   0.0        0.3   11.4   0.0    2.3  1  AAA_22           AAA domain
       0.25   10.8   0.1       0.25   10.8   0.1    2.3  2  UvrD-helicase    UvrD/REP helicase N-terminal domain
       0.38   11.2   7.7        6.9    7.2   0.0    2.4  2  Afi1             Docking domain of Afi1 for Arf3 in vesicle t


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.5   0.2   7.3e-45   2.2e-41       1     174 [.      27     199 ..      27     201 .. 0.93

  Alignments for each domain:
  == domain 1  score: 141.5 bits;  conditional E-value: 7.3e-45
                 -HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHS....TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTST..SEEEEEETTSSHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxx RF
        DEAD   1 tdiQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyet....kgktgpkalivePtreLaeqtlnnlkkfkkyid..lrvlliiggvaardqlsk 93 
                 t++Q++ ipl+l+g+d+lv+a+TGsGKT+a+lip+l+ ++++    ++++g   li++PtreLa+q+++ l+k++ y++  ++ + i ++ a + q+  
  EPX71727.1  27 TQVQKKGIPLALDGKDLLVQAKTGSGKTAAYLIPILELLLKQkqinEKNRGIFGLILVPTRELAQQVFKVLEKLTLYCGkhIKFVNIATNAADSVQRPL 125
                 789*************************************99999989999**************************8867888888888888888888 PP

                 HHTTCSEEEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  94 ldngvdivvgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkdvk 174
                 l   +div++tp+r++ ++s+g l+l++++flV+DEad +l+ g++d+++++ ++l       +   q++++SATl+++++
  EPX71727.1 126 LLDFPDIVISTPSRCVVHFSSGALSLEKIKFLVIDEADLILSFGYQDDMSNLSKAL-------PRGVQTLLMSATLTESIT 199
                 8666****************************************************.......45567********97765 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       1.9   5.7e+03      20      35 ..      81      97 ..      59     124 .. 0.52
   2 !  101.3   0.1   1.3e-32   3.7e-29       4     111 .]     237     405 ..     232     405 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1.9
                EEEESSHHHHHH.HHHH CS
  Helicase_C 20 lifvntidrlek.vkll 35
                li v+t++ +++ +k+l
  EPX71727.1 81 LILVPTRELAQQvFKVL 97
                67777777555444444 PP

  == domain 2  score: 101.3 bits;  conditional E-value: 1.3e-32
                 HHHHHHHHHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGG........................... CS
  Helicase_C   4 eallellkleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdv........................... 75 
                 +  + llkl+ ++gkilifvn i+r++++kl le++g+k++vl++elp n+r  i++qfnkg ++++iatd                            
  EPX71727.1 237 LLAYILLKLRLIKGKILIFVNEINRCYRLKLYLEQFGMKSLVLNSELPVNSRMNIVDQFNKGLYQIIIATDEsdkvteldeenedqqeatneaneevds 335
                 3444455*******************99********************************************777777777766666666666666666 PP

                 ..................................GTSSSTSTTESEEEESSSSSSHHHHHHHHTTSSSTT CS
  Helicase_C  76 ..................................aerGidipkvnlVinfdlprnvtsyiqriGRtgRag 111
                                                   + rG+d+++v +V nfd+p++++ yi+r+GRt+Rag
  EPX71727.1 336 kmeedvkdnqdsgengkkakskqkkaikkdreygVVRGLDFENVACVLNFDMPTTTKAYIHRVGRTARAG 405
                 6555555555555555555555555555555555555*******************************97 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0     2e-07    0.0006      24      83 ..      40     106 ..      13     195 .. 0.71
   2 ?   -2.1   2.0       1.1   3.3e+03      11      11 ..     325     325 ..     236     367 .. 0.52

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 2e-07
                 TSEEEEEESTTSTHHHHH.HHHHHHH-S...........-EEEEESSHHHHHHHHHHGGGGTGG... CS
      ResIII  24 dkrglikmaTGtGKTlva.aklierllkkgkee......kflflvprkslleqtleefkkflseayk 83 
                  k +l+++ TG+GKT  + + + e llk+++++        l+lvp+++l +q  + ++k++  + k
  EPX71727.1  40 GKDLLVQAKTGSGKTAAYlIPILELLLKQKQINeknrgiFGLILVPTRELAQQVFKVLEKLTLYCGK 106
                 57899*************5555555555555558999866799**********99666665544433 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.1
                 H CS
      ResIII  11 a 11 
                 a
  EPX71727.1 325 A 325
                 1 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0    0.0001       0.3       9     112 ..      44     177 ..      40     193 .. 0.65

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.0001
      AAA_22   9 vvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsst.sskdllrellralglelka..........................erlsseelle 80 
                 +v + +G+GKT  +     +l   +k+ +e+ + +f  + ++t ++++   ++l++l+l + +                             + ++++ 
  EPX71727.1  44 LVQAKTGSGKTAAYLIPILELLLKQKQINEKNRGIFGLILVPTrELAQQVFKVLEKLTLYCGKhikfvniatnaadsvqrpllldfpdiVISTPSRCVV 142
                 667889999999887766666656666664444443333333323444444555555555555666666666666666666666777776678899999 PP

      AAA_22  81 aleqalraravielliiDEaqh.lrs...eealeeL 112
                 ++   + +  +i++l+iDEa+  l s   ++ +++L
  EPX71727.1 143 HFSSGALSLEKIKFLVIDEADLiL-SfgyQDDMSNL 177
                 99999999999***********66.54454444444 PP

>> UvrD-helicase  UvrD/REP helicase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.1   8.5e-05      0.25       9      50 ..      36      84 ..      27      92 .. 0.76
   2 ?   -2.6   6.1         1     3e+03     127     169 ..     321     435 ..     263     510 .. 0.58

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 8.5e-05
                   HHS-SSEEEEEE-TTSSHHHHHHHHHHHHHHTSS.STGGG......EEE CS
  UvrD-helicase  9 iaslggpilveAsAGsGKTfvlaerilrlikeee.iepdr......ilv 50
                   +a  g+++lv A  GsGKT+     il+l+ +++ i+ ++      ilv
     EPX71727.1 36 LALDGKDLLVQAKTGSGKTAAYLIPILELLLKQKqINEKNrgifglILV 84
                   455799**************99999999876554377766776666665 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1
                    H........HCCHHHHHHHHHSCHSHTTTTHHHHHHHHHHHHHHCCCCCH.............................................. CS
  UvrD-helicase 127 e........dlkqqellkelleksaddslnldkkkleklikelsksrnik.............................................. 168
                               ++ + ++e++++ ++ds +  kk+ +k++k + k+r++                                               
     EPX71727.1 321 DqqeatneaNEEVDSKMEEDVKD-NQDSGENGKKAKSKQKKAIKKDREYGvvrgldfenvacvlnfdmptttkayihrvgrtaragkpgtamsfii 415
                    12223333344555666666653.333344444444445566666666666666666666666666666666666666666666666666666665 PP

                    ...................H CS
  UvrD-helicase 169 ...................k 169
                                        
     EPX71727.1 416 pksevgkhkpttlatckkdE 435
                    55555555555544444440 PP

>> Afi1  Docking domain of Afi1 for Arf3 in vesicle trafficking
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   6.1     0.039   1.2e+02      69     108 ..     315     357 ..     286     376 .. 0.52
   2 ?    7.2   0.0    0.0023       6.9      27      71 ..     524     568 ..     512     579 .] 0.80

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.039
        Afi1  69 kknklekrkkkksededdvdeedeeeeddnedlde...lskde 108
                  +++ e ++++ +e++++vd++ ee+ +dn+d  e   + k +
  EPX71727.1 315 LDEENEDQQEATNEANEEVDSKMEEDVKDNQDSGEngkKAKSK 357
                 2233333333334444444444444444444444422222222 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0023
        Afi1  27 etlseLAelmlPdqvhkrkqDitvFfLykdtsteeeeleeeekkn 71 
                  +l ++ e++lP +++  ++D+ +   +k+++++  ++++++k++
  EPX71727.1 524 RHLRHVPEYLLPKGLQAVNKDVGFVPFKKQNNRRAAKKKKNAKHR 568
                 5778899****************9999999998888776555533 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (579 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1766  (0.0984996); expected 358.6 (0.02)
Passed bias filter:                      741  (0.0413297); expected 358.6 (0.02)
Passed Vit filter:                       105  (0.00585643); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.75u 0.31s 00:00:01.06 Elapsed: 00:00:00.47
# Mc/sec: 3695.44
//
Query:       EPX71728.1  [L=974]
Description: ubiquitin carboxy terminal hydrolase Ubp12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.8e-79  266.9   0.0      2e-78  263.4   0.0    2.1  1  UCH           Ubiquitin carboxyl-terminal hydrolase
    1.3e-16   60.9   3.0    8.2e-16   58.4   0.2    3.3  4  DUSP          DUSP domain
    5.7e-15   55.7   0.0    1.2e-05   25.1   0.0    3.3  2  UCH_1         Ubiquitin carboxyl-terminal hydrolase
  ------ inclusion threshold ------
       0.12   12.5   1.1        3.3    7.9   0.4    2.5  2  Zn-ribbon_8   Zinc ribbon domain
       0.24   11.9   0.8        2.9    8.4   0.0    3.1  3  UN_NPL4       Nuclear pore localisation protein NPL4


Domain annotation for each model (and alignments):
>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  263.4   0.0   5.7e-82     2e-78       1     257 []     310     969 ..     310     969 .. 0.98

  Alignments for each domain:
  == domain 1  score: 263.4 bits;  conditional E-value: 5.7e-82
                 -EES-SSSTHHHHHHHHHHHTSHHHHHHHHTCHHCCSSTCCCCC-.TT.TTS.TTHHHHHHHHHHHHHHSH-CCEE--HHHHHHHHHHSGGGTSSSTCE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH   1 tGlsNlGntCymnsvlQcLfsipelrdyllsleevkkesrnkkelnesnplgkkgelakalkdlfkellkskskavsPkklkktlsklaksfsgykqqD 99 
                 +Gl+NlGntCymns+lQcL++++elrd++ s       +++k+++nesnplg++g++a a+++l+k+l++  +++++P+++k++++++++sf gy qqD
  EPX71728.1 310 CGLNNLGNTCYMNSALQCLTHVRELRDFFVS-------DEWKDQVNESNPLGMSGQIAGAFASLMKSLYNPDHTSFAPRQFKAIIGRFNHSFLGYGQQD 401
                 7******************************.......999999*************************999*************************** PP

                 HHHHHHHHHHHHHHHHCC.....................HCCCHHHHHHCCCTTSHHHHHH-EEEEE................................ CS
                 xxxxxxxxxxxxxxxxxx.....................xxxxxxxxxxxxxxxxxxxxxxxxxxxx................................ RF
         UCH 100 aqEflaflLdqlhedlnr.....................evaeekwkkhlkrndslitdlfegqlks................................ 145
                 +qEflaflLd+lhedlnr                     ++a+e+w+ h+ rnds+i+dlf+g+++s                                
  EPX71728.1 402 SQEFLAFLLDGLHEDLNRiyqkpytskpdlyeldeekirDTAKECWRLHKLRNDSIIVDLFQGMYRStlvcpecktvsitfdpfmdltlplpvqqfwsh 500
                 ***************************************99********************************************************** PP

                 ................................................................................................... CS
                 ................................................................................................... RF
         UCH 146 ................................................................................................... 145
                                                                                                                    
  EPX71728.1 501 pvvfipnditrrpitvdvvlenrsatigdlvkfvaskvgcddyrkifvtetyrgrfyrfltsltksllmeiseedeiylyeldkpidetdivvpvyhti 599
                 *************************************************************************************************** PP

                 ................................................................................................... CS
                 ................................................................................................... RF
         UCH 146 ................................................................................................... 145
                                                                                                                    
  EPX71728.1 600 shpsnssssyldnrdfgypfilqlknedvgdasiiekklkfkysqfttldtlkdaecleslqsntskdltssedpihnetktplfytkvfhdryeript 698
                 *************************************************************************************************** PP

                 ................................................................................................... CS
                 ................................................................................................... RF
         UCH 146 ................................................................................................... 145
                                                                                                                    
  EPX71728.1 699 gwnmhssnlsllterdvstleatvepstnvdyyngdedenqvitetapgsypdppelkeidhtnsnllvqgdllvcewletsqnfvfnespsasemghs 797
                 *************************************************************************************************** PP

                 ........................................................EEEEEEB-SEEEEEEESEEETEE.EEE--SEEB--S.EEE-GG CS
                 ........................................................xxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxx.xxxxxx RF
         UCH 146 ........................................................klklkrlPeiLiihlkRfsynss.ksKlntkvefpe.eldlss 186
                                                                         ++++++ PeiLi+hlkRfs +++ ++K+++ vefp+ + dlss
  EPX71728.1 798 lwsdkerimsetkeegnrphtitlddclnefekteqlgeedpwycptckdfrraskEMRIWKSPEILIFHLKRFSSERRfRDKIDELVEFPIeNFDLSS 896
                 ****************************************************************************999************76999998 PP

                 GBSS-BTTS-..TCS-BEEEEEEEEEESCTTSEEEEEEEECTTTTEEEEEETTEEEEE-HHCCCTTCEEEEEE CS
                 xxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH 187 ylaeekkkkt..eekkkYeLiavvvHsGslssGHYvayiknekngkWykydDetvkevkeeeevlssayiLfY 257
                  ++++k  +    ek+ YeL av +H+G+l++GHY+++++n++++++y+ydD++v++vk ee++ s+ay+LfY
  EPX71728.1 897 RTESQKFDPVgnGEKCLYELCAVDNHYGGLGGGHYTSFARNPDDNQFYCYDDSRVSPVKPEETITSAAYLLFY 969
                 77766555540045566******************************************9999999******* PP

>> DUSP  DUSP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.4   0.2   2.3e-19   8.2e-16       3      90 ..      76     151 ..      74     153 .. 0.95
   2 ?   -3.4   0.0       4.3   1.5e+04      14      32 ..     342     352 ..     341     433 .. 0.58
   3 ?   -2.8   0.0       2.9     1e+04      35      57 ..     584     608 ..     566     617 .. 0.67
   4 ?    0.8   0.0      0.21   7.7e+02      10      48 ..     775     830 ..     770     850 .. 0.72

  Alignments for each domain:
  == domain 1  score: 58.4 bits;  conditional E-value: 2.3e-19
                 EEEEEEHHHHHHHHHHHTTSTTSTTTTCGCS--SB-CGGGB.......TTTEB-SS--BTTTEEEEEHHHHHHHHHHC-.T----EEEE CS
        DUSP   3 kyyliskkWleqwksyvsydavteekesgskpgpIdnsdllkappltkengrlkpnlqegrdyeivpeevwkfLvqwYg.ggpeikrkv 90 
                  +y++s+ W+e+  sy+         e+g++pg++d +d+      ++e+g lk+nlqe+ d++i+++++w+ L +wYg +g+e +r+ 
  EPX71728.1  76 DFYILSYGWYEKLCSYL--------SEEGPFPGEVDQEDIM-----NLEDGSLKTNLQEEIDFTIISKKLWESLTEWYGlKGNEFPRET 151
                 58***************........9***************.....67*************************************9986 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 4.3
                 HHHHHHTTSTTSTTTTCGC CS
        DUSP  14 qwksyvsydavteekesgs 32 
                 +wk++v        +es++
  EPX71728.1 342 EWKDQV--------NESNP 352
                 588888........33333 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 2.9
                 -SB-CGGGB.........TTTEB-S CS
        DUSP  35 gpIdnsdll..kappltkengrlkp 57 
                 +pId +d++   +++ ++ ++   +
  EPX71728.1 584 KPIDETDIVvpVYHTISHPSNSSSS 608
                 4899999997755555544444444 PP

  == domain 4  score: 0.8 bits;  conditional E-value: 0.21
                 HHHHHHHHHHTTSTTSTT.................TTCGCS--SB-CGGGB..... CS
        DUSP  10 kWleqwksyvsydavtee.................kesgskpgpIdnsdllkappl 48 
                 +Wle  +++v +++ +++                 ke+g++p +I+ +d l++ ++
  EPX71728.1 775 EWLETSQNFVFNESPSASemghslwsdkerimsetKEEGNRPHTITLDDCLNEFEK 830
                 79999999994444333388888888888888888888889****99999933333 PP

>> UCH_1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.0   1.4e-08   5.2e-05       2     168 ..     311     505 ..     310     537 .. 0.78
   2 !   25.1   0.0   3.2e-09   1.2e-05     172     320 .]     814     951 ..     756     951 .. 0.71

  Alignments for each domain:
  == domain 1  score: 23.0 bits;  conditional E-value: 1.4e-08
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1   2 GLEnhivnsYlNslLQvlyfipplrnlalshlakeckke.......hcLlcElgflfdmldkakglncqasnFlralssipeasalglileeeeeteks 93 
                 GL n  +++Y+Ns LQ+l ++ +lr + +s   k+  +e         ++  +  l++ l +   ++     F   ++ +   s lg  ++   +    
  EPX71728.1 311 GLNNLGNTCYMNSALQCLTHVRELRDFFVSDEWKDQVNEsnplgmsGQIAGAFASLMKSLYNPDHTSFAPRQFKAIIGRFN-HSFLGYGQQ---D---- 401
                 99999********************88888876755555466555555666666666777777777777777777777776.666776522...2.... PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...........................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1  94 saislssliqsfnrflldqlekelketkkns...........................seeesaieqllgtkaettirclkCgseksrksstlvldlky 165
                          q+f  flld l+++l++  +++                            +++s+i +l++  + +t+ c +C++ +   + ++ l l  
  EPX71728.1 402 --------SQEFLAFLLDGLHEDLNRIYQKPytskpdlyeldeekirdtakecwrlhkLRNDSIIVDLFQGMYRSTLVCPECKTVSITFDPFMDLTLPL 492
                 ........278***************99999**************************9999999********************999999998888755 PP

                 x.x.........x RF
       UCH_1 166 P.k.........p 168
                 P +          
  EPX71728.1 493 PvQqfwshpvvfI 505
                 5544554444441 PP

  == domain 2  score: 25.1 bits;  conditional E-value: 3.2e-09
                 xxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...x.xxxx.xxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 172 kkeakvtfasilksslerek...ttrawCekCkryqpteqrktvknlPpvLalnakleeeeelelwkt...k.nwlp.leiklsldedknleeklkeer 262
                 +++++ t++++l+++ + e+   + +  C++Ck +   +++ ++ + P++L++++k++++e ++ +++   +   +p ++++l        ++++++++
  EPX71728.1 814 NRPHTITLDDCLNEFEKTEQlgeEDPWYCPTCKDFRRASKEMRIWKSPEILIFHLKRFSSE-RR-FRDkidElVEFPiENFDL--------SSRTESQK 902
                 6667777788887776665422134556*****************************9555.22.222122123333455555........33444555 PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 263 ekakaekeikvYeLqsvvvhigdskesghLvslvkvaekelerdppesqWylFNDflV 320
                  +   + e   YeL++v  h g +   gh+ s+++         p+++q+y+ +D  V
  EPX71728.1 903 FDPVGNGEKCLYELCAVDNHYG-GLGGGHYTSFARN--------PDDNQFYCYDDSRV 951
                 5556788999************.777*********3........4568*******876 PP

>> Zn-ribbon_8  Zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0     0.044   1.6e+02      18      34 ..     462     477 ..     458     481 .. 0.65
   2 ?    7.9   0.4   0.00093       3.3      10      36 ..     823     848 ..     822     853 .. 0.78

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.044
  Zn-ribbon_8  18 lqsisdaplta.CPeCgs 34 
                  +q + +   t  CPeC+ 
   EPX71728.1 462 FQGMYR--STLvCPECKT 477
                  666664..3444****75 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.00093
  Zn-ribbon_8  10 eCghefevlqsisdapltaCPeCgsev 36 
                  +C +efe+  +  ++++  CP+C+ + 
   EPX71728.1 823 DCLNEFEKTEQLGEEDPWYCPTCK-DF 848
                  7999***999999766566****5.44 PP

>> UN_NPL4  Nuclear pore localisation protein NPL4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.0   0.00082       2.9      17      48 ..     190     221 ..     188     230 .. 0.93
   2 ?   -1.4   0.1      0.98   3.5e+03      33      65 ..     634     669 ..     631     672 .. 0.71
   3 ?   -1.5   0.0         1   3.6e+03      27      49 ..     875     897 ..     868     903 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00082
                 EEEE-TTSBHHHHHHHHHHHSS-STTT-EEES CS
     UN_NPL4  17 Rieisekstlktllekvaeelkfsengfslyl 48 
                 +i++s+kstl +l e v+  l++s  +f l++
  EPX71728.1 190 KITLSSKSTLDDLFEGVKYTLSISGDNFRLWR 221
                 89***********************9999975 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.98
                 HHHHSS-STTT-EE...ESSTTCGCCCSSSSSSCCC CS
     UN_NPL4  33 vaeelkfsengfsl...ylernkttelvssssksvk 65 
                 ++++lkf+  +f      ++ ++ + l+s+ sk + 
  EPX71728.1 634 IEKKLKFKYSQFTTldtLKDAECLESLQSNTSKDLT 669
                 788889988888641225788888888888888876 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 1
                 HHHHHHHHHHSS-STTT-EEESS CS
     UN_NPL4  27 ktllekvaeelkfsengfslyle 49 
                 + + +k+ e ++f+ ++f l+  
  EPX71728.1 875 RRFRDKIDELVEFPIENFDLSSR 897
                 6899************9999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (974 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       497  (0.0277205); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.74u 0.30s 00:00:01.04 Elapsed: 00:00:00.51
# Mc/sec: 5692.16
//
Query:       EPX71729.1  [L=439]
Description: prephenate dehydrogenase Tyr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.5e-15   55.4   0.0    7.2e-15   54.7   0.0    1.2  1  PDH            Prephenate dehydrogenase
    5.1e-05   23.8   0.0    0.00021   21.8   0.0    2.1  2  F420_oxidored  NADP oxidoreductase coenzyme F420-dependent
    9.7e-05   22.6   0.0    0.00016   21.9   0.0    1.4  1  NAD_binding_2  NAD binding domain of 6-phosphogluconate dehyd
    0.00098   18.5   0.0      0.002   17.5   0.0    1.4  1  2-Hacid_dh_C   D-isomer specific 2-hydroxyacid dehydrogenase,
     0.0019   18.1   0.0     0.0038   17.1   0.0    1.5  1  3HCDH_N        3-hydroxyacyl-CoA dehydrogenase, NAD binding d
     0.0037   16.9   0.0     0.0068   16.1   0.0    1.4  1  ApbA           Ketopantoate reductase PanE/ApbA
  ------ inclusion threshold ------
      0.025   14.7   0.0      0.075   13.1   0.0    1.7  2  Shikimate_DH   Shikimate / quinate 5-dehydrogenase
      0.043   13.4   0.0      0.075   12.6   0.0    1.3  1  IlvN           Acetohydroxy acid isomeroreductase, NADPH-bind


Domain annotation for each model (and alignments):
>> PDH  Prephenate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.7   0.0   3.2e-18   7.2e-15      24     250 ..      48     268 ..      30     275 .. 0.85

  Alignments for each domain:
  == domain 1  score: 54.7 bits;  conditional E-value: 3.2e-18
                 HHHHHHTTSSSEEES-.GGGGCCGSEEEE-S-GGGHHHHHHHHHHHS-TT-EEEE--S--CHHHHHHHHHCC..GCEEEEEES---S-SSGGG--TTTT CS
         PDH  24 aeaalelglvdeatdd.ieavkeadivvlavPvevilevlkelaphlkedalitDvgsvKekvvreleellkegksfvgghPmaGteksGvdaareelf 121
                 +++ +  g + +a +d +e  ++ d ++ +v  e + +++    p+ k +a++  ++s K   +r+ e+ l++ + +++ h m G+        r +  
  EPX71729.1  48 IVKQKCEGTKINALQDgFEVSRKSDYILYSVESEYLDRIVGMYGPATKVGAIVGGQSSCKSPEIRAFEKYLPQDVDIISCHSMHGP--------RVNPQ 138
                 4455455666677777799999****************************************************************........66665 PP

                 TT-EEEEEE-TTS-HHHHHHHHHHHHHCT-EEEE--HHHHHHHHHHHTHHHHHHHHHHHHHHHCHHCCCCHHHHCGTCCHHHHH....CGGGS-HHHHH CS
         PDH 122 enavviLtPtektdkealekvkelleevgarvilmspeeHDrvvavvshlphvvaialaatlkekkndekeirklasggfrdvt....RiaksnPelwa 216
                  + +vi+     +d + +e+vke+l  ++  v+ +s+eeHDr++a ++ ++h+++ a+  +  ++++   ei ++ +g+ +       Ri +s   ++a
  EPX71729.1 139 SQPLVII-RHRSKD-KSFEIVKEILSCLQSSVVFLSAEEHDRITADTQAVTHAAFLAMGMAWRANNQYPWEINRWCGGIENIKMnlsmRIYSSKWHVYA 235
                 5555555.555455.79*******************************************9999999999*******97443333455*********** PP

                 HHHHHTHHHHHHHHHHHHHHHHHHHHHHHTT-HH CS
         PDH 217 dilleNkeavlealdkfikelkklkelienedae 250
                  +++ N +   +++++++ ++++l +l  +++a+
  EPX71729.1 236 GLAILNPD-ARKQIKQYATSVTELFKLSISGKAQ 268
                 ********.99**********9998765555555 PP

>> F420_oxidored  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.0   9.5e-08   0.00021       1      81 [.      13      90 ..      13     100 .. 0.77
   2 ?   -1.9   0.0       2.3   5.2e+03      29      47 ..     143     161 ..     136     198 .. 0.63

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 9.5e-08
                   EEEEETTSHHHHHHHHHHHHTTS-GGCEEEEEESSCCC..HHHHHHHHC-EEECECHHHHHHH-SEEEE-S-HHHHHHHHHHC CS
  F420_oxidored  1 kigiiGaGnmgealasgllaagaqpheivvansrnpek..aeelaeelgvkvtavdneeaaeeadvvvlavkpedveevlsel 81
                   +igiiG+G+mg+  a+++++ag     iv +++r+++   +++  e  ++++ + d  e+ +++d ++ +v  e+++ ++   
     EPX71729.1 13 QIGIIGFGDMGRLYAERFSQAG----WIVNVCDRKENFdiVKQKCEGTKINALQ-DGFEVSRKSDYILYSVESEYLDRIVGMY 90
                   59********************....6666777776521133333555599999.9999999*********999999888765 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 2.3
                    EEEEESSCCCHHHHHHHHC CS
  F420_oxidored  29 vvansrnpekaeelaeelg 47 
                    v++ +r+++k  e+ +e+ 
     EPX71729.1 143 VIIRHRSKDKSFEIVKEIL 161
                    5566777777777776654 PP

>> NAD_binding_2  NAD binding domain of 6-phosphogluconate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.0   7.1e-08   0.00016       1     102 [.      13     116 ..      13     169 .. 0.79

  Alignments for each domain:
  == domain 1  score: 21.9 bits;  conditional E-value: 7.1e-08
                    EEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT....EEE-SSHHHHHHHCSEEEE-SSSHHHHHHHHHSHCCC--TT-EEEE-S-- CS
  NAD_binding_2   1 kigfiGlGvMGsnmalnllkagykvavynrtkekveelvaeg....akaaesieelvasldvvitmvkagkavdeviegllealkkgdilidgsts 92 
                    +ig+iG G MG+  a+++ +ag+ v v +r+ e+++ + ++     ++a+++  e+ ++ d ++  v++ +  d ++    +a k g+i+   s+ 
     EPX71729.1  13 QIGIIGFGDMGRLYAERFSQAGWIVNVCDRK-ENFDIVKQKCegtkINALQDGFEVSRKSDYILYSVES-EYLDRIVGMYGPATKVGAIVGGQSSC 106
                    69***************************98.5555555543445699999999999999999999987.55666666666666666666666666 PP

                    -HHHHHHHHH CS
  NAD_binding_2  93 spedtrelak 102
                    +  + r ++k
     EPX71729.1 107 KSPEIRAFEK 116
                    6665555555 PP

>> 2-Hacid_dh_C  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   8.7e-07     0.002      38      96 ..      13      75 ..       4      81 .. 0.74

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 8.7e-07
                  EEEEES-SHHHHHHHHHHHHTT-EEEEESSSHHHHH.CHHHHTCEECSHH...HHHHH-SEEE CS
  2-Hacid_dh_C 38 tvGiiGlGrIGqavakrlkafgmkviaydrskkkee.eeeelgvelvsle...ellaesDivs 96
                  ++GiiG+G++G+  a+r+++ g  v + dr+++ +  +++ +g +   l+   e+ ++sD++ 
    EPX71729.1 13 QIGIIGFGDMGRLYAERFSQAGWIVNVCDRKENFDIvKQKCEGTKINALQdgfEVSRKSDYIL 75
                  79*****************************98444544555555555542225666777776 PP

>> 3HCDH_N  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   1.7e-06    0.0038       1      34 [.      13      46 ..      13      78 .. 0.86

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 1.7e-06
                EEEEE--SCCHHHHHHHHHHTT-EEEEE-S-HHH CS
     3HCDH_N  1 kvaviGaGtmGagiaavfasagleVvlvdiseea 34
                ++++iG G mG+  a+ f +ag  V+++d++e++
  EPX71729.1 13 QIGIIGFGDMGRLYAERFSQAGWIVNVCDRKENF 46
                699***************************8864 PP

>> ApbA  Ketopantoate reductase PanE/ApbA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0     3e-06    0.0068       1      40 [.      14      52 ..      14      81 .. 0.83

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 3e-06
                EEEES-SHHHHHHHHHHHHHTHCEEEE-SCHHHHHHHHHC CS
        ApbA  1 iailGaGaiGsllaakLakagadvtlilrsrrlealkknG 40
                i i+G+G +G+l+a + ++ag+ v +++r++ ++ +k+  
  EPX71729.1 14 IGIIGFGDMGRLYAERFSQAGWIVNVCDRKENFDIVKQ-K 52
                79****************************96665544.3 PP

>> Shikimate_DH  Shikimate / quinate 5-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   3.4e-05     0.075      12      86 ..      11      81 ..       4      85 .. 0.88
   2 ?   -2.5   0.1       2.3   5.1e+03      65      85 ..     156     176 ..     142     190 .. 0.51

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 3.4e-05
                  T-EEEEES-SHHHHHHHHHHHCCT-CEEEEEESSHHHHHHHHHHHT.ET-EEEEGCGHHHHHHT-SEEEE-SSSS CS
  Shikimate_DH 12 ekkvlliGaGemaelvakhLlakgvkkvvvaNRtlerakelaeelkgeeiealkleelkellaeadvvisatase 86
                  e ++ +iG G m++l a+ ++++g   v v  R  e+ + + ++++g+  ++ +l++  e+ +++d ++ ++ se
    EPX71729.1 11 EFQIGIIGFGDMGRLYAERFSQAGWI-VNVCDRK-ENFDIVKQKCEGT--KINALQDGFEVSRKSDYILYSVESE 81
                  56899*******************99.******7.7899999999888..7888999999999999999998876 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 2.3
                   EGCGHHHHHHT-SEEEE-SSS CS
  Shikimate_DH  65 kleelkellaeadvvisatas 85 
                    ++e+ ++l+++ v +sa  +
    EPX71729.1 156 IVKEILSCLQSSVVFLSAEEH 176
                   345555555555444444444 PP

>> IlvN  Acetohydroxy acid isomeroreductase, NADPH-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   3.3e-05     0.075       4      66 ..      11      76 ..       8      89 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 3.3e-05
                TS-EEEES-SHHHHHHHHHHHHTT--EEEEE-TT-HHHHHHHHTT-EEEEHH...HHHHT-SEEEE CS
        IlvN  4 gkkiaviGyGsqGhaqalnlrdsgldvvvglregsksvkkAkeegfevltva...eavkkadvvmi 66
                + +i +iG+G  G+  a+ + ++g  v v  r+++  + k k eg ++  ++   e+++k+d ++ 
  EPX71729.1 11 EFQIGIIGFGDMGRLYAERFSQAGWIVNVCDRKENFDIVKQKCEGTKINALQdgfEVSRKSDYILY 76
                5689*******************************8888888888888777633346667777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (439 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       487  (0.0271627); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3031.76
//
Query:       EPX71730.1  [L=487]
Description: armadillo repeat containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.42   10.0   3.8       0.24   10.8   0.2    2.5  3  RYDR_ITPR  RIH domain


Domain annotation for each model (and alignments):
>> RYDR_ITPR  RIH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.2   1.3e-05      0.24      81     139 ..      44     105 ..       7     150 .. 0.71
   2 ?   -2.3   0.1      0.14   2.5e+03     158     178 ..     231     251 ..     192     270 .. 0.65
   3 ?   -2.6   0.0      0.17     3e+03     162     184 ..     412     435 ..     380     451 .. 0.63

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 1.3e-05
   RYDR_ITPR  81 keivvlcyrlLayfcrdsrkNqeaiakh..lsylleqlarpslre.gpLdvlaasLmdnneL 139
                 + i ++c r+La +c +   N + ++++  l++l    a+   ++     v++  + d++++
  EPX71730.1  44 ECIHKQCLRFLANSCSEEDGNRATFFENkgLDVLKIYCAKADENSaLAYAVIHNCILDSKKY 105
                 457899**********************8888886664444444435567777777777774 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.14
   RYDR_ITPR 158 kgy.egerfLdfLrsLcvvnge 178
                 +   +++ fL++L++   +++ 
  EPX71730.1 231 N-LhRNSAFLEYLKKFLLSDDS 251
                 2.24677888888875445554 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 0.17
   RYDR_ITPR 162 gerfLd.fLrsLcvvngeaveenq 184
                  e fLd +L  + vvn++ +    
  EPX71730.1 412 TEIFLDsVLTTINVVNNHPIVTGE 435
                 356666567777777666655444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (487 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       524  (0.0292264); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3434.69
//
Query:       EPX71731.1  [L=111]
Description: transcription factor TFIID complex subunit Taf13 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-26   92.5   0.2    1.5e-26   92.2   0.2    1.1  1  TFIID-18kDa    Transcription initiation factor IID, 18kD subu
  ------ inclusion threshold ------
      0.056   13.5   0.0      0.084   12.9   0.0    1.3  1  Bromo_TP       Bromodomain associated
      0.089   13.1   0.0       0.14   12.4   0.0    1.5  1  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a


Domain annotation for each model (and alignments):
>> TFIID-18kDa  Transcription initiation factor IID, 18kD subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.2   0.2   2.5e-30   1.5e-26       1      86 [.      16      99 ..      16     106 .. 0.95

  Alignments for each domain:
  == domain 1  score: 92.2 bits;  conditional E-value: 2.5e-30
                 X--CCCCHHHHHCTTS-SS--HHHHHHHHHHHHHHHHHHHHHHHC-XXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  TFIID-18kDa  1 slfrkelqsmlyalGdvkePlqetvqlledlvrgyliellqqaakvaklrgsrkitlEDllfliRkDkkKlnRlkellslkellkk 86
                 +lf k+l+s++ya+Gd+ +P  ++v++le++v +y+ e++ +aa++a +r  +k++++D++f++R D+kKl+R++ell l++++  
   EPX71731.1 16 HLFTKDLKSLMYAFGDDLNPAPDSVNVLEEIVVDYINEMCLEAARIAGNR--NKVKVDDFKFALRNDPKKLGRVEELLVLQKMIAD 99
                 68**********************************************99..9***************************999865 PP

>> Bromo_TP  Bromodomain associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   1.4e-05     0.084      28      70 ..      39      79 ..      24      79 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.4e-05
                HHHHHHHHHHHHHHHHHHHHHHHHTTSS-SS--HHHHHHHHHH CS
    Bromo_TP 28 aLEtLteiaqkYirelgeqaksfaehagRseptlkDvvltLqe 70
                 ++ L ei+ +Yi+e+  +a + a   +R ++++ D+ ++L +
  EPX71731.1 39 SVNVLEEIVVDYINEMCLEAARIA--GNRNKVKVDDFKFALRN 79
                699********************9..9**********999975 PP

>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   2.4e-05      0.14      23      64 ..      37      76 ..      22      77 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 2.4e-05
                   HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHH CS
  CBFD_NFYB_HMF 23 kdAkeliaecveefieelaseAaeickkekrKtikaehiklA 64
                    d+  ++ e+v+ +i+e++ eAa+i+  +++  +k ++ k A
     EPX71731.1 37 PDSVNVLEEIVVDYINEMCLEAARIAGNRNK--VKVDDFKFA 76
                   5788999*******************98877..666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       337  (0.0187964); expected 358.6 (0.02)
Passed bias filter:                      242  (0.0134977); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.44
# Mc/sec: 764.49
//
Query:       EPX71732.1  [L=764]
Description: HAL protein kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.9e-46  156.7   0.0      9e-46  156.4   0.0    1.1  1  Pkinase      Protein kinase domain
    6.5e-29  101.0   0.0    9.3e-29  100.5   0.0    1.2  1  Pkinase_Tyr  Protein tyrosine kinase
    0.00037   19.9   0.0    0.00062   19.2   0.0    1.3  1  Kinase-like  Kinase-like
     0.0018   17.6   0.0     0.0033   16.8   0.0    1.3  1  Kdo          Lipopolysaccharide kinase (Kdo/WaaP) family
  ------ inclusion threshold ------
        3.7    6.2   5.8        7.1    5.3   5.8    1.4  1  Herpes_LMP2  Gammaherpesvirus latent membrane protein (LMP2) 


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.4   0.0   2.5e-49     9e-46       2     263 ..     428     724 ..     427     725 .. 0.84

  Alignments for each domain:
  == domain 1  score: 156.4 bits;  conditional E-value: 2.5e-49
                 EEEEEEEEESSEEEEEEE.....ETTTTEEEEEEEEECHCHCHHHH...HHHHHHHHHHHHHSCTTB--EEEEEEE.......SSEEEEEEE--TTEBH CS
     Pkinase   2 ekleklGeGsfGkVykav.....eketgkivAvKkikkekakkkke...kkvlrEikilkklkhpnivrlyevfee.......kdelylvleyveggel 85 
                 e+ + lG+G+++++  +      e+e++   A+K  +++ +++++    +k+++E  +  +++hpn+v+ y+ + +       +d+ +++++++++g+l
  EPX71732.1 428 EETKDLGSGATAVIRCVSlknpnESEKKLRLAIKAYRRKADDESESfyiSKLTSEWLVQCRMEHPNVVKAYDLCLDshifplySDTWCILMDFCSKGDL 526
                 5678999999987643321121144566679*******9999999999***********************************9*************** PP

                 HHHHH.HHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS..........BCTTTSCGGGS-HHHHTTSC CS
     Pkinase  86 adlle.rkgslseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk..........ltsfvgtseYlAPEvlkene 173
                  +l++ r+  l+ ++ + ++kqil+g++y+Hs+g+ HrDlKpeNiLi ++g l+itDFG +  l    +           + + g+  ++APE+l+  +
  EPX71732.1 527 LSLISnRHDRLTRRDFECMVKQILRGVAYIHSQGVAHRDLKPENILITSNGALRITDFGACDVLCDPGNteklpsaisqSNGVFGSDPFMAPEILSPGS 625
                 ****978888****************************************************9988877899*****999999************9999 PP

                 B.SHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHT....HHHHHHHCT.SHH...HHHTTS.........-HHHHHHHHHHT-SSGCCSTTHHH CS
     Pkinase 174 y.skkvDvWslGvilyelltgkppfsgekgkekvekeldq....lekilkilg.etkeklpeasei.........seeakdllkkllkkdpkkRltaee 257
                 y    +D+Ws+++++ ++++++ pf++  ++++ ++++ +       ++++ +  ++++      +         +e +++l   l +  p++R+ a e
  EPX71732.1 626 YnAFYADMWSCAIVIHTMYFRTYPFRKAVTTDQLYNKYLRswreYNLMCDVQNvRVSKT------LpylkpvcdlPEPMQRLFFCLANPVPEERMLALE 718
                 98999*********************877766655555542222333333333422222......2344455777************************ PP

                 HHTSGG CS
     Pkinase 258 llqhpy 263
                 +l+ +y
  EPX71732.1 719 ALSVDY 724
                 999877 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.5   0.0   2.6e-32   9.3e-29       2     218 ..     428     663 ..     427     679 .. 0.83

  Alignments for each domain:
  == domain 1  score: 100.5 bits;  conditional E-value: 2.6e-32
                  EEEEEEEEESSEEEEEEEEET.TTTSSEEEEEEEEESTTSSHHH....HHHHHHHHHHHHTS-BTTB--EEEEEE.......SSSSEEEEEE--TTEB CS
  Pkinase_Tyr   2 elgkklGeGafGkVvegtlkg.ekekkevkVavKtlkeeateee....keelleeakimkklkhpnivkllgvct.......keepllivteyvkgGd 87 
                  e +k+lG+Ga + +   +lk+ ++++k+++ a+K  +++a++e+     ++l++e  + ++++hpn+vk + +c+        +++ +i+++++++Gd
   EPX71732.1 428 EETKDLGSGATAVIRCVSLKNpNESEKKLRLAIKAYRRKADDESesfyISKLTSEWLVQCRMEHPNVVKAYDLCLdshifplYSDTWCILMDFCSKGD 525
                  56799******99999999999999***********988887763455678899999******************554444444559*********** PP

                  HHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEE.......EETTSSTSGGGGS-HHHHH CS
  Pkinase_Tyr  88 LlkfLrkkekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddey.......vkkeeaklpvkWmapEslk 178
                  Ll+ + ++ +++lt +d  +++ q+ +G++y++s+ + Hrdl   N+L+++n   +i+DfG ++ + +  ++       +++++   +  +mapE+l+
   EPX71732.1 526 LLSLISNR-HDRLTRRDFECMVKQILRGVAYIHSQGVAHRDLKPENILITSNGALRITDFGACDVLCDPGNTeklpsaiSQSNGVFGSDPFMAPEILS 622
                  *******9.****************************************************99888443333233555455666667889******** PP

                  HSEEE.HHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHH CS
  Pkinase_Tyr 179 ekkft.sksDvWsfGvllwEiftlgespypglkneevlekl 218
                   ++++   +D+Ws +++++ ++       + +++ ++++k+
   EPX71732.1 623 PGSYNaFYADMWSCAIVIHTMYFRTYPFRKAVTTDQLYNKY 663
                  **987269**********99887555444455776766655 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   1.7e-07   0.00062     133     254 ..     529     654 ..     516     713 .. 0.72

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 1.7e-07
  Kinase-like 133 krsethkkletiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggfta...Lvragtkvvl.seve........kgfaPpEllgsrgg 218
                    s++h +l       +  q++r +a+++++g+ h +++++n+l   +g l +++f+a   L   g+  +l s +           f  pE+l+  g 
   EPX71732.1 529 LISNRHDRLTRRDFECMVKQILRGVAYIHSQGVAHRDLKPENILITSNGALRITDFGAcdvLCDPGNTEKLpSAISqsngvfgsDPFMAPEILSP-GS 625
                  5555566666666666777999**********************************875558888887777777777778877777888998888.55 PP

  Kinase-like 219 ytrknktkmthkldaWqlGlviyriwclklPltlat 254
                  y+        +  d W   +vi  ++ ++ P+ +a 
   EPX71732.1 626 YNA-------FYADMWSCAIVIHTMYFRTYPFRKAV 654
                  554.......89999999999999999999998764 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   9.2e-07    0.0033     110     155 ..     532     577 ..     519     589 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 9.2e-07
         Kdo 110 akwaelaeelkrallkavgrliaklhragvnHadlyaknillqqee 155
                 +++++l  +  + ++k++ r +a +h+ gv H+dl + nil+  ++
  EPX71732.1 532 NRHDRLTRRDFECMVKQILRGVAYIHSQGVAHRDLKPENILITSNG 577
                 44444778888899****************************9887 PP

>> Herpes_LMP2  Gammaherpesvirus latent membrane protein (LMP2) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   5.8     0.002       7.1       2      56 ..     333     390 ..     332     399 .. 0.77

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.002
                  XXXXXXXXXXXXXX..XXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Herpes_LMP2   2 gslemvpmgagpps..pggdp..dgydggnnsqypsasgssgntptppndeeresneep 56 
                  gsl+m p g+g     p  +p   gy   + s   sa+gssgn  +p n    e  +  
   EPX71732.1 333 GSLNMTPQGTGFECinPA-NPfsPGYKKPDTSAQTSANGSSGNQAAPENAGTNEGSDYQ 390
                  99*******996541133.332269************************9887765543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (764 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       485  (0.0270511); expected 358.6 (0.02)
Passed bias filter:                      277  (0.0154498); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.67u 0.29s 00:00:00.96 Elapsed: 00:00:00.51
# Mc/sec: 4489.18
//
Query:       EPX71733.1  [L=460]
Description: nuclear export factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.7e-100  336.2   1.3   2.1e-100  335.9   1.3    1.1  1  SAC3_GANP        SAC3/GANP family
    9.8e-06   25.6   0.1    2.7e-05   24.2   0.0    1.8  2  CSN8_PSD8_EIF3K  CSN8/PSMD8/EIF3K family


Domain annotation for each model (and alignments):
>> SAC3_GANP  SAC3/GANP family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  335.9   1.3  2.4e-104  2.1e-100       1     292 [.      69     382 ..      69     383 .. 0.99

  Alignments for each domain:
  == domain 1  score: 335.9 bits;  conditional E-value: 2.4e-104
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----HHHHHHHHHHHHHHTG..G..GTTTCHHHHHHHHHHHHH CS
   SAC3_GANP   1 GtCedmCPekEraeRevqkdlsrfEkekkktkkvdpskaVKeysRsaagqeeplpsdlRppevLkkTldYLlkeildreeeelaevydFiwDRtRaiRq 99 
                 GtC++mCP++E +eR++qk ++ +Ek +++t+++dp+  VK+y+R+aag+ + lpsd+Rpp+ LkkT +YL++++l  ++++++e++ F++DRtRaiRq
  EPX71733.1  69 GTCTQMCPNFEIVERTMQKSIHPYEK-HPQTHQPDPEFTVKAYHRPAAGKGPILPSDVRPPALLKKTTEYLFQQLL--QKHPFQEAHAFVRDRTRAIRQ 164
                 9************************7.999**********************************************..557****************** PP

                 HHHHTT--SHHHHHHHHHHHHHHHHHHHHHHHTTS.---CHHHHHHHHHHHHHHHHHHHHHH...---TTHHHHHHHHHHHTTT-HHHHHHHCTS-HHH CS
   SAC3_GANP 100 DltiqnlskaeaveilerivrfhilslhrlceepessfdeqqnleqLqkclqsLlelYddlrkkkeelpneaefrayylLlnlrdpdilrevqelpsei 198
                 D+++q+++++e+++++e i+rfhi+slh+l+ +p  sf++qq+ eqL+k+l +L +lYd  r k++ +p+e+efray+ Ll l+dp +  e+ +++s++
  EPX71733.1 165 DFSVQSSFTEESIYCHELIARFHIVSLHELKGQP--SFSSQQEVEQLSKVLYTLGQLYDYKRMKNQASPHEPEFRAYMALLCLGDPALSIETLSWSSDL 261
                 **********************************..9************************************************************** PP

                 HTSHHHHHHHHHHHHH--TT.........................HHHHHHHHT..TS-HHHHHHHGGGHHHHHHHHHHHHHHHS-TT---EEHHHHHH CS
   SAC3_GANP 199 lkspevqlalklvaalqenn.........................yvrffklvk..evsylqacllerhfnevRrkalkalsraykskskkvpleeLae 270
                 +++p v++al+l++++q+nn                         y+rffkl+k  ++++l+ac+l ++++++R+ alka++++y s + ++p+++L +
  EPX71733.1 262 IEKPIVRTALALHSYAQRNNhfeqklkhvdlslissenteaapnfYTRFFKLAKsfKTTFLMACILDMFLPSIRTGALKAMKKSYLSAHANIPFNDLLR 360
                 *************************************************************************************9999********** PP

                 HTT-SSHHHHHHHHHHTT--EE CS
   SAC3_GANP 271 lLlfddeeeaeefceayglevs 292
                 +L+++ +ee++++c+++gl+v+
  EPX71733.1 361 ILSVSHNEELIKICQSHGLQVE 382
                 *******************986 PP

>> CSN8_PSD8_EIF3K  CSN8/PSMD8/EIF3K family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0      0.55   4.9e+03       9      37 ..     137     165 ..     130     219 .. 0.59
   2 !   24.2   0.0     3e-09   2.7e-05      54     127 ..     305     382 ..     263     401 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.55
  CSN8_PSD8_EIF3K   9 niLlkaLtqndladfrlllkrlpaaiqqs 37 
                      +++  +L + + +++++  ++   ai q+
       EPX71733.1 137 YLFQQLLQKHPFQEAHAFVRDRTRAIRQD 165
                      44444444455566665555555555554 PP

  == domain 2  score: 24.2 bits;  conditional E-value: 3e-09
  CSN8_PSD8_EIF3K  54 anyakfwstlksddlsadltadvagleelvReeiaklvgkaY....esIsadvlaelLglssdeelekfvkevgWeld 127
                      + y++f++++ks +    +  + +++  ++R  ++k ++k+Y     +I  ++l ++L +s+ eel k++ ++g +++
       EPX71733.1 305 NFYTRFFKLAKSFKTTFLMACILDMFLPSIRTGALKAMKKSYlsahANIPFNDLLRILSVSHNEELIKICQSHGLQVE 382
                      56***********9999*************************99999***************************9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (460 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       643  (0.0358637); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 3048.63
//
Query:       EPX71734.1  [L=210]
Description: thymidylate kinase Tmp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.8e-52  177.1   0.1    3.2e-52  176.9   0.1    1.0  1  Thymidylate_kin  Thymidylate kinase
     0.0021   18.1   0.9      0.021   14.8   0.0    2.1  2  AAA_14           AAA domain
     0.0093   16.5   0.1      0.035   14.6   0.1    2.0  1  AAA_18           AAA domain
     0.0094   15.9   0.4      0.053   13.4   0.0    1.9  2  ATPase_2         ATPase domain predominantly from Archaea
  ------ inclusion threshold ------
      0.011   15.9   0.1      0.024   14.8   0.0    1.5  2  SKI              Shikimate kinase
      0.014   14.8   0.1      0.049   13.1   0.0    1.8  2  KTI12            Chromatin associated protein KTI12
      0.028   14.7   0.1       0.51   10.6   0.0    2.1  2  AAA_22           AAA domain
      0.042   14.0   0.1        0.3   11.2   0.0    2.1  2  ADK              Adenylate kinase
      0.057   13.9   0.1       0.98    9.8   0.0    2.5  1  AAA_17           AAA domain
       0.12   12.9   0.4       0.22   12.0   0.4    1.7  1  ABC_tran         ABC transporter
       0.12   12.6   0.0       0.23   11.6   0.0    1.5  1  AAA_33           AAA domain


Domain annotation for each model (and alignments):
>> Thymidylate_kin  Thymidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  176.9   0.1   1.9e-55   3.2e-52       1     185 []      12     194 ..      12     194 .. 0.96

  Alignments for each domain:
  == domain 1  score: 176.9 bits;  conditional E-value: 1.9e-55
                      EEESTTSSHHHHHHHHHHHHHHTTE..EEEESSSTTSHHHHHHHHHHHTCS---HHHHHHHHHHHHHHTTHHHHHHHHHTT-EEEEES-HHHHH CS
  Thymidylate_kin   1 iEGlDGaGKttqaellkerlkeegik.vvltrepggteiGekirelllkeeeleeqteallfaadriehleekikpalkqgktvivdRylfSsl 93 
                      iEGlD++GK+tq++l+ e l+++g+k  + ++++++t iG+ki+++l+++ +l++q ++llf+a+r ++l + ik ++++g t+++dRy+fS++
       EPX71734.1  12 IEGLDRSGKSTQCQLILENLQAKGKKvQLYKFPDRSTAIGKKIDAYLKETSQLSDQVIHLLFSANR-WELIDDIKSKIQSGVTCVLDRYAFSGI 104
                      8*************************999*************************************.*************************** PP

                      HHHHTTTTTTCHHHHHHGGGTTS.E-SEEEEEESSHHHHHTSCCTTSSTTTSHHHHHHHHHHHHHHHHHHHHTTSTEEEEETTS-HHHHHHHH CS
  Thymidylate_kin  94 aYqgakegvdldlvlslnedvll.kPdltflldvdpevalkRlakrdeldeeeeeqldflrkvrerylelakederiliidasksieevheeI 185
                      a+++ak+   l++ +++++d +l +Pdl+++l v+pe+a+kR + ++e++e++e+q+ + +++++   e  +e+ +++++das+s+e vh++I
       EPX71734.1 105 AFSAAKG---LNWEWCKSPDRGLlRPDLVIFLHVSPEIAAKRGQYGEERYENIEMQKMVEKNFERIQREYTEEKLSFVTLDASSSLETVHSQI 194
                      ****988...9*********999************************************9999995555555*******************98 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   1.3e-05     0.021       3      73 ..       8      84 ..       6     100 .. 0.65
   2 ?    2.0   0.1      0.12     2e+02      50      89 ..     161     200 ..     139     207 .. 0.64

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.3e-05
      AAA_14  3 kilvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelilek..lke.......ekktylflDEi 73
                 ++vi+G+ r+GK+t ++ ++++l +k +++  +++ d +++  ++   ++ +++e   l++       + +++ ++D i
  EPX71734.1  8 SLVVIEGLDRSGKSTQCQLILENLQAKGKKVQLYKFPDRSTAIGKK---IDAYLKETsqLSDqvihllfSANRWELIDDI 84
                579**************99998877888888888888877743332...3333333221111233333334555556655 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.12
      AAA_14  50 ekllelileklkeekktylflDEiqevpewekalkslvde 89 
                 ek+ e i+++++eek +++ lD  + ++++ + + +l+d+
  EPX71734.1 161 EKNFERIQREYTEEKLSFVTLDASSSLETVHSQIINLIDK 200
                 2334445555555577788888888888888888777775 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.1   2.2e-05     0.035       1     110 [.      10     144 ..      10     166 .. 0.73

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 2.2e-05
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf.gvnlrdvakenglllevdpealdeskrldedkldklldaleenss.........aleegknlvidghlaelese 89 
                 +++ G  ++GK+t ++ + + l+  g +++ + + +++     +   d ++++  +  d+++ +l  +++         + ++g ++v+d      +  
  EPX71734.1  10 VVIEGLDRSGKSTQCQLILENLQAkGKKVQLYKFPDRSTAIGKKI--DAYLKETSQLSDQVIHLLFSANRweliddiksKIQSGVTCVLDRYAFSGIAF 106
                 789***************888633455555555555555555555..8888988888899999998888888888888777777777777666555555 PP

      AAA_18  90 aakdikk.................vvLtaspeelleRl 110
                 +a ++                   ++L++spe+ ++R 
  EPX71734.1 107 SAAKGLNwewckspdrgllrpdlvIFLHVSPEIAAKRG 144
                 55544447788888899999999999999999999995 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.0   3.3e-05     0.053      18      88 ..       5      74 ..       1     100 [. 0.66
   2 ?    0.7   0.1      0.25     4e+02      70     114 ..     148     191 ..     124     207 .. 0.51

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 3.3e-05
    ATPase_2 18 epneiyfiYGpegsGKtaLlkeiienledkdkyv.iyyialreesiskldefieeeeekkklekalgiavpk 88
                ++ + ++i G  +sGK++  + i+enl+ k+k+v +y ++ r+ +i k+ +     +e ++l++++   + +
  EPX71734.1  5 NRGSLVVIEGLDRSGKSTQCQLILENLQAKGKKVqLYKFPDRSTAIGKKIDA--YLKETSQLSDQVIHLLFS 74
                567889*********************9998855278788888777665444..244444444444333333 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.25
    ATPase_2  70 eeeeekkklekalgiavpkaeleeilkeksklvfkaielllekik 114
                 ee +e+ +++k++ +++++ +  e  +ek   v+   ++ le + 
  EPX71734.1 148 EERYENIEMQKMVEKNFERIQR-EYTEEKLSFVTLDASSSLETVH 191
                 4555555555555444444443.2223333333333333333333 PP

>> SKI  Shikimate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       2.7   4.4e+03     113     145 ..      33      65 ..      19      74 .. 0.58
   2 ?   14.8   0.0   1.5e-05     0.024      79     156 ..     122     197 ..     112     199 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 2.7
                 SCHHHHHHHHHHHHHHHHHCCSSCEEEECTSSH CS
         SKI 113 ekskeeelleelaereplyeeaadvvvdesees 145
                 +k k+ +l+++  +  ++ +++++++ ++s+ s
  EPX71734.1  33 AKGKKVQLYKFPDRSTAIGKKIDAYLKETSQLS 65 
                 444444555555555555555555555555555 PP

  == domain 2  score: 14.8 bits;  conditional E-value: 1.5e-05
                 HHHHHHHSEEEEEE--HHHHHHHHHHTTSSGGGCSCHHHHHHHHHHH.HHHHHHCCSSCEEEECTSSHHHHHHHHHHHH CS
         SKI  79 rellkekgiviyLdvsleellerlkadkeRPllqekskeeelleela.ereplyeeaadvvvdeseeskeevaeeilea 156
                 r ll+   +vi+L+vs+e  ++r +  +eR    e +k   ++++++ +re   e+++ v+ d+s++  e+v ++i++ 
  EPX71734.1 122 RGLLR-PDLVIFLHVSPEIAAKRGQYGEERYENIEMQK-MVEKNFERiQREYTEEKLSFVTLDASSSL-ETVHSQIINL 197
                 55666.889****************9999833333333.44566677799999999*******99999.9999999876 PP

>> KTI12  Chromatin associated protein KTI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0     3e-05     0.049       3      36 ..       9      42 ..       8      87 .. 0.86
   2 ?   -0.7   0.0      0.48   7.9e+02     120     147 ..     148     174 ..     122     204 .. 0.51

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 3e-05
                EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE- CS
       KTI12  3 LvvltGlPssGKstrakeLakaleeekrsvvvid 36
                Lvv+ Gl  sGKst  + + + l++++++v++ +
  EPX71734.1  9 LVVIEGLDRSGKSTQCQLILENLQAKGKKVQLYK 42
                9***************************999875 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.48
                 T-S..S-HHHHHHHHHH.---TTSS-GGG CS
       KTI12 120 eekeeyekelldaLiqR.yeePdsknrWD 147
                 ee+  ye+  +++++++ +e  ++++  +
  EPX71734.1 148 EER--YENIEMQKMVEKnFERIQREYTEE 174
                 333..555444444443344444444333 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00031      0.51       4      38 ..       6      44 ..       3      84 .. 0.73
   2 ?    2.0   0.0      0.14   2.3e+02      24      66 ..     158     200 ..     151     209 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00031
      AAA_22  4 tagilvvtGesGtGKTtllrrlleqldeeakaee....e 38
                + +++v+ G   +GK+t ++ +le+l++  k  +    +
  EPX71734.1  6 RGSLVVIEGLDRSGKSTQCQLILENLQAKGKKVQlykfP 44
                56788999*****************97553332255542 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.14
      AAA_22  24 rlleqldeeakaeeerpevvfvtlpsstsskdllrellralgl 66 
                 +++e++ e+++ e+ + ++ fvtl +s+s++++ +++ + ++ 
  EPX71734.1 158 KMVEKNFERIQREYTEEKLSFVTLDASSSLETVHSQIINLIDK 200
                 5555665666666678888899999999999999999998875 PP

>> ADK  Adenylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00018       0.3       3      64 ..      14      73 ..      12      87 .. 0.83
   2 ?    0.2   0.0      0.45   7.4e+02     102     123 ..     126     155 ..     108     199 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00018
                ESTTSSHHHHHHHHHHHHTSEEEEHHHHHHHHHHCT-HHHHHHHHHHHTTSS--HHHHHHHH CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         ADK  3 GaPgaGKGtqaeklvkkyglahlstGdllRaevksgtelGkeakevmdkgelvpdevvvklv 64
                G   +GK tq++ + ++++++       l +   ++t +Gk++ +++++ + ++d+v+  l 
  EPX71734.1 14 GLDRSGKSTQCQLILENLQAKGKK--VQLYKFPDRSTAIGKKIDAYLKETSQLSDQVIHLLF 73
                66679************9976433..3466777999********************997765 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.45
                 EESEEEEEE--HHHHHHHHHT........G CS
                 xxxxxxxxxxxxxxxxxxxxx........x RF
         ADK 102 kldlvleldvpeevlveRltg........D 123
                 + dlv+ l+v+ e+  +R           +
  EPX71734.1 126 RPDLVIFLHVSPEIAAKRGQYgeeryeniE 155
                 668888888888888887544444444442 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0    0.0006      0.98       6     118 ..      18     143 ..      14     161 .. 0.52

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.0006
                 SSHHHHHHHHHHHH.....TEEEEEHHHHHHHHHHTT..TSHSSHHHHCTSHHHHHHHHHHHHHHHHHHHHHSSE.EEEEE-SEEEETTEEEESSHHHH CS
      AAA_17   6 sGKgtqceklveky.....gfthlsaGdllreeakrg..glakardemrklpleekkelqkeaaekiaeeakkkg.vlvdghprikeqagfldglpkev 96 
                 sGK+tqc+ + e++     +++ + + d   +  k+    l+++ +  +++ +    + + e++++i+ + +++   ++d ++       + +gl  e 
  EPX71734.1  18 SGKSTQCQLILENLqakgkKVQLYKFPDRSTAIGKKIdaYLKETSQLSDQVIHLLFSANRWELIDDIKSKIQSGVtCVLDRYAFSGIAFSAAKGLNWEW 116
                 8******99998875555555566665544444333311222222222233333344444555555555533322256666654333333334444333 PP

                 HH.....HH..SEEEEEE--HHHHHHH CS
      AAA_17  97 le.....elkpdaiilleadpeeiler 118
                 ++      l pd++i+l+++pe   +r
  EPX71734.1 117 CKspdrgLLRPDLVIFLHVSPEIAAKR 143
                 321222245788888888888755554 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.4   0.00014      0.22       9      72 ..       5      66 ..       2     210 .] 0.80

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00014
                ETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEE.EE-SS--S-T CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxx RF
    ABC_tran  9 kegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeig.vlpqepqlfp 72
                ++g++v+i G   +GKSt ++l++++l+ +  +++l + + +    +   k+i  +l++++ql +
  EPX71734.1  5 NRGSLVVIEGLDRSGKSTQCQLILENLQAKGKKVQLYKFPDR---STAIGKKIDaYLKETSQLSD 66
                7899************************98888866533322...23344444303333344444 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00014      0.23       1     137 [.       9     168 ..       9     174 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00014
      AAA_33   1 lvllvGlpGsGKstlaerllkklg.....avllssdtlrrrlfg.......tdqqsktdytrvldrlyq.ilnelarkalsagrnvildatnls..... 81 
                 lv++ Gl  sGKst  + +l++l+     ++l   ++ ++++ +       +  q   + +++l+++++  l + ++++ ++g +++ld   +s     
  EPX71734.1   9 LVVIEGLDRSGKSTQCQLILENLQakgkkVQLYKFPDRSTAIGKkidaylkETSQLSDQVIHLLFSANRwELIDDIKSKIQSGVTCVLDRYAFSgiafs 107
                 7999***************999999978866666666555544455566542222233667899998885466999999*********99866656666 PP

      AAA_33  82 .....rrer..arflklarrlgvpvrivvvetdeetlkeRla...kRaangddrsevpeealdrqk 137
                      ++e+  +  + l+r    p++++++++++e +++R +   +R++n +   ++ e++++r +
  EPX71734.1 108 aakglNWEWckSPDRGLLR----PDLVIFLHVSPEIAAKRGQygeERYENIE-MQKMVEKNFERIQ 168
                 6666555555344444554....89999999999999999762223444322.2355555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1093  (0.0609627); expected 358.6 (0.02)
Passed bias filter:                      710  (0.0396006); expected 358.6 (0.02)
Passed Vit filter:                        69  (0.00384851); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.52u 0.29s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 1393.40
//
Query:       EPX71735.1  [L=259]
Description: methyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-20   74.0   0.0    2.5e-20   72.9   0.0    1.6  1  Methyltransf_11  Methyltransferase domain
    4.8e-20   72.1   0.0    9.8e-20   71.1   0.0    1.5  1  Methyltransf_25  Methyltransferase domain
    7.4e-16   58.7   0.0      3e-15   56.8   0.0    2.0  1  Methyltransf_12  Methyltransferase domain
    7.9e-16   58.2   0.0      1e-15   57.8   0.0    1.2  1  Methyltransf_31  Methyltransferase domain
    3.6e-13   49.7   0.0    6.6e-13   48.8   0.0    1.4  1  Methyltransf_23  Methyltransferase domain
    3.3e-09   36.2   0.0    5.3e-09   35.5   0.0    1.3  1  RrnaAD           Ribosomal RNA adenine dimethylase
    5.5e-09   35.8   0.0    8.1e-09   35.3   0.0    1.2  1  MTS              Methyltransferase small domain
    1.1e-08   34.8   0.0    5.6e-08   32.4   0.0    1.9  2  Ubie_methyltran  ubiE/COQ5 methyltransferase family
    2.8e-08   33.6   0.0    3.8e-08   33.1   0.0    1.2  1  MetW             Methionine biosynthesis protein MetW
    1.3e-06   27.9   0.0    4.9e-06   26.0   0.0    1.7  1  CMAS             Mycolic acid cyclopropane synthetase
    1.4e-05   24.8   0.0    2.3e-05   24.1   0.0    1.3  1  NodS             Nodulation protein S (NodS)
    3.5e-05   23.8   0.0    5.2e-05   23.3   0.0    1.2  1  Methyltransf_32  Methyltransferase domain
    9.2e-05   21.2   0.0    0.00013   20.7   0.0    1.1  1  Methyltransf_29  Putative S-adenosyl-L-methionine-dependent m
    0.00025   20.6   0.0    0.00035   20.1   0.0    1.2  1  PrmA             Ribosomal protein L11 methyltransferase (Prm
    0.00048   19.7   0.0    0.00076   19.1   0.0    1.3  1  DOT1             Histone methylation protein DOT1
     0.0014   18.4   0.0     0.0024   17.6   0.0    1.4  1  PCMT             Protein-L-isoaspartate(D-aspartate) O-methyl
     0.0015   18.2   0.0     0.0056   16.4   0.0    1.8  1  TPMT             Thiopurine S-methyltransferase (TPMT)
     0.0016   17.6   0.0     0.0076   15.4   0.0    1.9  2  DREV             DREV methyltransferase
     0.0044   16.6   0.0     0.0073   15.8   0.0    1.3  1  Methyltransf_5   MraW methylase family
     0.0098   15.2   0.0       0.02   14.2   0.0    1.7  1  Methyltransf_2   O-methyltransferase domain
  ------ inclusion threshold ------
      0.028   14.4   0.1       0.12   12.3   0.1    1.9  1  ADH_zinc_N       Zinc-binding dehydrogenase
      0.049   13.9   0.0      0.089   13.0   0.0    1.5  1  TrkA_N           TrkA-N domain
      0.079   12.6   0.0       0.59    9.8   0.0    2.1  2  N6_N4_Mtase      DNA methylase
      0.092   11.8   0.0        4.4    6.3   0.0    2.6  2  Pox_MCEL         mRNA capping enzyme
        0.1   12.7   0.1        1.2    9.3   0.1    2.2  1  FtsJ             FtsJ-like methyltransferase
       0.11   12.0   0.0       0.18   11.2   0.0    1.3  1  TehB             Tellurite resistance protein TehB


Domain annotation for each model (and alignments):
>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.9   0.0   3.6e-23   2.5e-20       1      95 [.      37     133 ..      37     134 .. 0.93

  Alignments for each domain:
  == domain 1  score: 72.9 bits;  conditional E-value: 3.6e-23
                      EEET-TTSHHHHHHHHTTSEEEEEES-HHHHHHHHHHCCHHT-EEEETTEECCCTSS-TT-EEEEEEES-CCC-....CCHHHHHHHHHHHEEE CS
  Methyltransf_11   1 LdvGcGtGrlaealakrgarvvgvDlskemlklakekaseeglkvefvvadaeklpfednsfDlvvssevlhhv....edpekalkeiaRvLkp 90 
                      Ld+GcG G l++ la+++++++g+D s+ m++ ak+k+ e+++     +  a+ + f+++ +D+v+s+ +lh++    e+++ +++ +aRvL+p
       EPX71735.1  37 LDLGCGDGVLTQNLASQCKHITGIDSSPSMVQSAKQKGLEAYV--VAGEKLASATEFPSEGYDAVFSNAALHWIlrnpEQRSTVFQGVARVLRP 128
                      8****************************************94..45566666678*******************99999************** PP

                      EEEEE CS
  Methyltransf_11  91 gGllv 95 
                      gG++v
       EPX71735.1 129 GGRFV 133
                      ***98 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.1   0.0   1.4e-22   9.8e-20       1      97 []      36     130 ..      36     130 .. 0.87

  Alignments for each domain:
  == domain 1  score: 71.1 bits;  conditional E-value: 1.4e-22
                      EEEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTTTEEEEESBCCGBSSSTTTEEEEEEESTGGG..SSHHHHHHHHHHHHHH CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeeglnvefvqgdaedlpfedgsfDlvvssgalhh..lsdedlekalkeiarv 92 
                      vLdlGcG G lt++la ++  +++tg+D s++m++ a+++  e  + v   ++ a++ +f+++ +D+v+s+ alh+   ++e++ ++++ +arv
       EPX71735.1  36 VLDLGCGDGVLTQNLASQC--KHITGIDSSPSMVQSAKQKGLE--AYVVAGEKLASATEFPSEGYDAVFSNAALHWilRNPEQRSTVFQGVARV 125
                      9*****************9..9******************943..345555556677889999*******777**97446778899******** PP

                      EEEEE CS
  Methyltransf_25  93 LkpgG 97 
                      L+pgG
       EPX71735.1 126 LRPGG 130
                      ****9 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.8   0.0   4.3e-18     3e-15       1      99 []      37     132 ..      37     132 .. 0.93

  Alignments for each domain:
  == domain 1  score: 56.8 bits;  conditional E-value: 4.3e-18
  Methyltransf_12   1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvelealdlldldggssfDlvvasnvlhhl....kdirevldnir 90 
                      L++GcG+G l++ l+ +   +++tg+D sps++     + ak++++ + +v  e+l ++ +++++ +D+v+++ +lh++    +++  v++ ++
       EPX71735.1  37 LDLGCGDGVLTQNLASQ--CKHITGIDSSPSMV-----QSAKQKGLEAYVVAGEKLASATEFPSEGYDAVFSNAALHWIlrnpEQRSTVFQGVA 123
                      8****************..**************.....556666677779*******9999999******************88888******* PP

  Methyltransf_12  91 klLkpgGrl 99 
                      ++L+pgGr+
       EPX71735.1 124 RVLRPGGRF 132
                      *******96 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.8   0.0   1.5e-18     1e-15       5     113 ..      34     138 ..      30     185 .. 0.78

  Alignments for each domain:
  == domain 1  score: 57.8 bits;  conditional E-value: 1.5e-18
  Methyltransf_31   5 lrvlDlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaqklgldnveFeqgdiee.leklledekfDlilsnevl....naladpdki 93 
                       +vlDlGCG G lt +la++    ++++GiD s+ ++++A++    +gl+ + +  +   +  e  +  e +D ++sn++l            +
       EPX71735.1  34 DVVLDLGCGDGVLTQNLASQ---CKHITGIDSSPSMVQSAKQ----KGLEAYVVAGEKLASaTE--FPSEGYDAVFSNAALhwilRNPEQRSTV 118
                      689***************54...368****************....699988888877777344..8889***********8775555566679 PP

  Methyltransf_31  94 leeiervlkpggilliedpr 113
                      ++++ rvl+pgg++++e   
       EPX71735.1 119 FQGVARVLRPGGRFVAECGA 138
                      9*************976554 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.8   0.0   9.6e-16   6.6e-13      11     162 ..      23     188 ..      10     190 .. 0.77

  Alignments for each domain:
  == domain 1  score: 48.8 bits;  conditional E-value: 9.6e-16
  Methyltransf_23  11 dklerllpklraggrvLdiGcGtGillevlrengfsvtgvDlspeaveiae....kakkaqkdqfdeqeaaepqgkfdlIvlrevlehvp.dpp 99 
                      + +++l+  l ++  vLd+GcG+G l++ l+ + +++tg+D sp +v+ a+    +a+    ++  ++  ++p++ +d + ++  l+++  +p+
       EPX71735.1  23 EIVKKLA--LSPQDVVLDLGCGDGVLTQNLASQCKHITGIDSSPSMVQSAKqkglEAYVVAGEKL-ASATEFPSEGYDAVFSNAALHWILrNPE 113
                      4445555..78899****************99999**************9988874444444444.455667*****************97888 PP

  Methyltransf_23 100 ...ellrqiatllkpgGylllse........plaslkedrllld.wlylvpagrhi.sffsarslkelleeaGlev 162
                          +++ +a+ l+pgG+++ +         +l+s   + ll++ ++ +++++    +f +++++  +l+eaG+e+
       EPX71735.1 114 qrsTVFQGVARVLRPGGRFVAECgafgnvseVLSS-IYTVLLDHgIPKERIDEANPwYFGTEQAYTSMLNEAGFEI 188
                      8889***************9999774333222222.244444443577888844443444999***********98 PP

>> RrnaAD  Ribosomal RNA adenine dimethylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.5   0.0   7.6e-12   5.3e-09      16      71 ..      18      73 ..       8      93 .. 0.92

  Alignments for each domain:
  == domain 1  score: 35.5 bits;  conditional E-value: 7.6e-12
                HHHHHHHHHHH-GGTTSEEEEES-TTTCCHHHHHCC-SEEEEE-S-HHHHHHHHCH CS
      RrnaAD 16 kkvineIldklnleekltvleigpGkGilTeeLakrakqvvvlElderLakllqkk 71
                + + +eI++kl l++++ vl++g G G+lT++La ++k+ + + + ++++++ ++k
  EPX71735.1 18 PLLTKEIVKKLALSPQDVVLDLGCGDGVLTQNLASQCKHITGIDSSPSMVQSAKQK 73
                56789*********************************************998875 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.0   1.2e-11   8.1e-09      23     139 ..      24     136 ..      17     153 .. 0.79

  Alignments for each domain:
  == domain 1  score: 35.3 bits;  conditional E-value: 1.2e-11
                 HHHHCHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHH.HHHTTGCEEEEE-STTTTSTTS-EEEEEE---STTTCHCHHHHHHH CS
         MTS  23 LletlpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesaken.leanklevevvasdvleeveekkfdlivsNPPfhagkatelavaee 120
                 ++++l  + ++ vlDlGcG Gvl+ +la+++++  +t +d +   ++sak+  lea  +++e +as    e++ + +d++ sN  +h     + +   +
  EPX71735.1  24 IVKKLALSPQDVVLDLGCGDGVLTQNLASQCKH--ITGIDSSPSMVQSAKQKgLEAYVVAGEKLAS--ATEFPSEGYDAVFSNAALHWILR-NPEQRST 117
                 566666668889*****************9999..9************987514444444555444..3455568*************999.8999999 PP

                 HHHHHHHHEEEEEEEEEEE CS
         MTS 121 liaeAkeaLkegGeLliVa 139
                 +++  +++L++gG+++   
  EPX71735.1 118 VFQGVARVLRPGGRFVAEC 136
                 *************987655 PP

>> Ubie_methyltran  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.4   0.0   8.1e-11   5.6e-08      42     151 ..      27     134 ..      18     160 .. 0.82
   2 ?   -0.3   0.0      0.83   5.7e+02     200     222 ..     173     195 ..     168     197 .. 0.79

  Alignments for each domain:
  == domain 1  score: 32.4 bits;  conditional E-value: 8.1e-11
                      H--S--TTEEEEES-TT-HHHHHHHHHHHHHHEEEEEES-HHHHHHHHHHHHHHTSSTEEEEE--TTT-TTS..-T-EEEEEEES-GGG-S-HH CS
  Ubie_methyltran  42 lvavkrgakvlDvagGtgDlafklsdsvgekgkvvvlDinenmLkvgekklkeegkinieflqanaeeLpfe..ddsfDvvtvsfGlrnvtDkl 133
                        a  +   vlD+ +G g l+ +l+++ +   +++++D +++m++ +++k  e  ++  e l a+a e+p e  d  f   ++ + lrn   ++
       EPX71735.1  27 KLALSPQDVVLDLGCGDGVLTQNLASQCK---HITGIDSSPSMVQSAKQKGLEAYVVAGEKL-ASATEFPSEgyDAVFSNAALHWILRNPEQRS 116
                      4445556689***********99988766...699***************999888887777.556677766235789999************* PP

                      HHHHHHHHHEEEEEEEEE CS
  Ubie_methyltran 134 kaLkeayrvlkpGGrlvv 151
                      ++++ + rvl+pGGr+v 
       EPX71735.1 117 TVFQGVARVLRPGGRFVA 134
                      ***************974 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.83
                      -HHHHHHHHHHTTEEEEEEEEEG CS
  Ubie_methyltran 200 dqetlkeliedaGfksveyeslt 222
                       ++ + +++++aGf+    e++t
       EPX71735.1 173 TEQAYTSMLNEAGFEITFIENVT 195
                      5678899*******987777665 PP

>> MetW  Methionine biosynthesis protein MetW
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.1   0.0   5.6e-11   3.8e-08      11      93 ..      30     114 ..      21     150 .. 0.80

  Alignments for each domain:
  == domain 1  score: 33.1 bits;  conditional E-value: 5.6e-11
        MetW  11 ikpgsrvldlGcGdGellellkeekqvdgrGleldeegvaecvakGl..sviqgdldkdlenfedksfdyvvlsqtlqat.rnpke 93 
                 + p+  vldlGcGdG l + l+  +  +  G++ + + v+ + +kGl  +v+ g+     ++f+++ +d v  + +l  + rnp++
  EPX71735.1  30 LSPQDVVLDLGCGDGVLTQNLAS-QCKHITGIDSSPSMVQSAKQKGLeaYVVAGEKLASATEFPSEGYDAVFSNAALHWIlRNPEQ 114
                 578999*************9976.3445679***************944599999999*************999999864377764 PP

>> CMAS  Mycolic acid cyclopropane synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.0   7.1e-09   4.9e-06      52     248 ..      22     226 ..      19     241 .. 0.73

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 7.1e-09
                 HHHHTTTT--TT-EEEEES-TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHH.HHTS-SSS-EEEEES-GGG---.--SEEEEES-GGGT..SGGGHH CS
        CMAS  52 dlileklelkpGmtlLdiGcGWGslvrraverydvkvvglTlSkeqaklakkr.vdeldlerkvevklldyedlde.kvdrvvsvgafehv..gkenyd 146
                 + i++kl l p + +Ld+GcG G l+++ +++   ++ g+  S    + ak++ +++  ++ +   kl+   +++   +d+v s  a+  +    e+  
  EPX71735.1  22 KEIVKKLALSPQDVVLDLGCGDGVLTQNLASQ-CKHITGIDSSPSMVQSAKQKgLEAYVVAGE---KLASATEFPSeGYDAVFSNAALHWIlrNPEQRS 116
                 5689**************************99.789******999988887761444444444...455556666549**********99977789999 PP

                 HHHHHHHHHS-TT-EEEEEEEEE--HHHHHCTTCCC........HHHHHHTSTTS---BHHHHHHHHHHTT-EEEEEEE-.HHHHH.HHHHHHHHHHHH CS
        CMAS 147 tffkklkkllkedGllllhtitslhkkelaerglkl........kfidkeiFPgGelpsieeieeeiseagftvvdvesl.rahYa.kTLkaWaealqe 235
                 t f+ + ++l+++G+++ ++    + +e+ +   ++        + id+   P  +  + ++ ++  +eagf+++ +e++ r+ Y  + +++W +++ +
  EPX71735.1 117 TVFQGVARVLRPGGRFVAECGAFGNVSEVLSSIYTVlldhgipkERIDEA-NP-WYFGTEQAYTSMLNEAGFEITFIENVtRPTYLdRDVRQWLDTFAH 213
                 ******************99888777777655544456643333333322.22.245666777778889999999888864677852568888887777 PP

                 THHHHHHHSHHHH CS
        CMAS 236 nkdeaialvseev 248
                 n  ea    +e +
  EPX71735.1 214 NFYEAFPHLKETL 226
                 7766665544443 PP

>> NodS  Nodulation protein S (NodS)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.0   3.3e-08   2.3e-05      43     143 ..      34     133 ..      18     145 .. 0.80

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 3.3e-08
        NodS  43 siadalevGcaaGalterlapyckrltvvdvveeaiararervkesshiswivsdvqqfstdekfdlivvaevlyyiedvaelraav.rnlvsllapdg 140
                 +   +l++Gc  G lt++la  ck++t +d  ++ ++ a+++  e+  ++  +        +e +d +     l++i    e r++v + + ++l+p+g
  EPX71735.1  34 D--VVLDLGCGDGVLTQNLASQCKHITGIDSSPSMVQSAKQKGLEAYVVAGEKLASATEFPSEGYDAVFSNAALHWILRNPEQRSTVfQGVARVLRPGG 130
                 4..389***********************************99997666665555444456789*****999999886666666554288999****** PP

        NodS 141 qlv 143
                 ++v
  EPX71735.1 131 RFV 133
                 998 PP

>> Methyltransf_32  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.0   7.6e-08   5.2e-05      16      70 ..      20      73 ..      10      96 .. 0.81

  Alignments for each domain:
  == domain 1  score: 23.3 bits;  conditional E-value: 7.6e-08
  Methyltransf_32 16 llkel...akesgaltvvDvGaGkgYLsfvlalkekeyklkvvgidakeelvekaekr 70
                     l+ke+    + s++  v+D+G+G g L++ la+   +   +++gid++ ++v++a++ 
       EPX71735.1 20 LTKEIvkkLALSPQDVVLDLGCGDGVLTQNLAS---Q-CKHITGIDSSPSMVQSAKQK 73
                     4444433356678899*****************...5.779************99875 PP

>> Methyltransf_29  Putative S-adenosyl-L-methionine-dependent methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   1.9e-07   0.00013     111     217 ..      26     134 ..       8     145 .. 0.75

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 1.9e-07
  Methyltransf_29 111 liaaggkvrtvlDvGCgvasfgayllsrdvltlslapkDeheaqvqfaLeRgvpailav...lgtkrlpyPsrsfdlihCsrCridwt....ee 197
                      ++ a +   +vlD+GCg   ++  l s+      ++  D+  + vq a  +g+ a++ +   l+ +   +Ps+ +d +  s   ++w     e+
       EPX71735.1  26 KKLALSPQDVVLDLGCGDGVLTQNLASQC---KHITGIDSSPSMVQSAKQKGLEAYVVAgekLA-SATEFPSEGYDAVF-SNAALHWIlrnpEQ 114
                      4445556679********99999998863...45677799999************974311122.3458*******997.66778886222256 PP

  Methyltransf_29 198 dgilllevdRvlRpgGyfvl 217
                       ++++  v RvlRpgG fv 
       EPX71735.1 115 RSTVFQGVARVLRPGGRFVA 134
                      6899**************96 PP

>> PrmA  Ribosomal protein L11 methyltransferase (PrmA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   5.1e-07   0.00035     160     240 ..      31     109 ..      21     150 .. 0.78

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 5.1e-07
        PrmA 160 kegeevlDvGtGSGiLaiaaakLgakkvvavDiDevAvkvakeNaelNkveaklevalseellkeekadvivaNILaevli 240
                  +++ vlD+G+G G+L+   +    k+++++D  +  v++ak+      v a  ++a + e ++ e +d +++N   + ++
  EPX71735.1  31 SPQDVVLDLGCGDGVLTQN-LASQCKHITGIDSSPSMVQSAKQKGLEAYVVAGEKLASATEFPS-EGYDAVFSNAALHWIL 109
                 567899**********854.445789****************9988888888777877888888.8899999996555554 PP

>> DOT1  Histone methylation protein DOT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0   1.1e-06   0.00076      28      84 ..      18      72 ..       3      87 .. 0.79

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 1.1e-06
                HHHHHHHHHHTT--TT-EEEEES-TTSHHHHHHHHHH--SEEEEEE--HHHHHHHHH CS
        DOT1 28 peflsevldkvnlkkedvFvDLGSGvGnvvlqaalevgcklsvGvEimdnaselaek 84
                p +++e+++k+ l+++dv +DLG G G   l   l+ +ck+ +G++ + +  + a++
  EPX71735.1 18 PLLTKEIVKKLALSPQDVVLDLGCGDGV--LTQNLASQCKHITGIDSSPSMVQSAKQ 72
                557789****************998775..556677789999**9988777666655 PP

>> PCMT  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   3.5e-06    0.0024      59     117 ..      18      73 ..       5     138 .. 0.85

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 3.5e-06
                 HHHHHHHHHHTT--TT-EEEEES-TTSHHHHHHHHHHCTTCEEEEEESBHHHHHHHHHH CS
        PCMT  59 phmvalalellelkkgarvLevGsGsGyltavlarlvgekgrvvsierikelveeakrn 117
                 p +   +++ l l++++ vL++G+G G lt  la   ++ +   +i+ ++++v++ak++
  EPX71735.1  18 PLLTKEIVKKLALSPQDVVLDLGCGDGVLTQNLASQCKHIT---GIDSSPSMVQSAKQK 73 
                 566667788899******************99999888766...***********9875 PP

>> TPMT  Thiopurine S-methyltransferase (TPMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   8.1e-06    0.0056      25      83 ..      20      77 ..       8     134 .. 0.70

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 8.1e-06
                HHHHHHHT.T-S--EEEEEET-TT-HHHHHH-BTTEEEEEE-S-HHHHHHHHHHHTTSG CS
        TPMT 25 llkkfldalkakaglrvlvPlCGkaldlvwlAeqgrevvGvelselAvekffeeanlep 83
                l k+ +++l++ ++  vl  +CG ++  + lA+q +++ G++ s++ v+++ ++++le 
  EPX71735.1 20 LTKEIVKKLALSPQDVVLDLGCGDGVLTQNLASQCKHITGIDSSPSMVQSA-KQKGLEA 77
                34455666999999999999******************************5.6666643 PP

>> DREV  DREV methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   1.1e-05    0.0076      94     138 ..      32      76 ..      11     136 .. 0.78
   2 ?    0.1   0.0      0.52   3.6e+02      15      53 ..     194     232 ..     162     241 .. 0.69

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.1e-05
        DREV  94 edkklldlGaGdGeitkrvaptfeevyatelsetmrdrlkkkkyn 138
                  +  +ldlG GdG +t+++a++ +++   + s  m +  k+k+ +
  EPX71735.1  32 PQDVVLDLGCGDGVLTQNLASQCKHITGIDSSPSMVQSAKQKGLE 76 
                 45679*******************************999998754 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.52
        DREV  15 lfvaslpdaetqsflenskklsanlfiqlyhalassils 53 
                 +  ++++d +  ++l+   +     f +l  +l   +++
  EPX71735.1 194 VTRPTYLDRDVRQWLDTFAHNFYEAFPHLKETLRERVYQ 232
                 444556666666666666555555555555555555554 PP

>> Methyltransf_5  MraW methylase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   1.1e-05    0.0073       4      63 ..      16      73 ..      13      93 .. 0.89

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1.1e-05
                    X--TTTHHHHHHT---TT-EEEES--TTSHHHHHHHTT--TTEEEEEES-HHHHHHHTT. CS
  Methyltransf_5  4 HvpVLlqevvellepkedgvyiDaTlGaggHsealLeqlselrligidrDksalaraker 63
                     vp L +e+v+ l+  ++ v +D   G+g+ ++ l +q +  +++gid  +s+++ ak++
      EPX71735.1 16 FVPLLTKEIVKKLALSPQDVVLDLGCGDGVLTQNLASQCK--HITGIDSSPSMVQSAKQK 73
                    6899*******************************99986..689************984 PP

>> Methyltransf_2  O-methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.0   2.9e-05      0.02      49     161 ..      19     131 ..       5     187 .. 0.73

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.9e-05
                     HHHHHHHHSS-GGG-SEEEEET-TTSHHHHHHHHH-TT-EEEEEE-HHHHHHHHHHS-----TTEEEEES-..TTTS---..--SEEEEESSGGG CS
  Methyltransf_2  49 lvakkvleafdleglkslvDvGGGtGalakaivsayPtikvivfDlpeVveaAkehlsageeervefvgGd..ffkdslP..eaDaillkrvlhD 139
                     l +k+++++ +l++  +++D+G G G+l ++ +s+  +i++i    p+ v++Ak++   g+e  v  v+G+      + P    Da++ +  lh 
      EPX71735.1  19 LLTKEIVKKLALSPQDVVLDLGCGDGVLTQNLASQCKHITGIDS-SPSMVQSAKQK---GLEAYV--VAGEklASATEFPseGYDAVFSNAALHW 107
                     7899*******************************999998764.69999999998...444433..3333102334556433466665555553 PP

                     S..-HHHHHHHHHHHHHH--TT-E CS
  Methyltransf_2 140 w..sdekcvklLkrvkkalpagGk 161
                        + e+ +++ + v + l++gG+
      EPX71735.1 108 IlrNPEQRSTVFQGVARVLRPGGR 131
                     221445566666666666666666 PP

>> ADH_zinc_N  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   0.00018      0.12      12      87 ..      51     134 ..      42     156 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00018
                 HTT-.EEEEEESSHHHHHHHHHTTESEEEETTTCHHHHHHHHHTTTSSEEEEEESSC..........SHHHHHHHHHCEEEEEEEEE CS
  ADH_zinc_N  12 alGa.eviavdsseeklelakklGadevinykeadlverikeltggegvdvvfecvG..........sgatleaalkllkpgGrlvv 87 
                 a+ + +++++dss++ ++ ak+ G ++++ + e +l ++  e+   eg+d+vf  ++            ++++   ++l+pgGr+v 
  EPX71735.1  51 ASQCkHITGIDSSPSMVQSAKQKGLEAYVVAGE-KLASAT-EFP-SEGYDAVFSNAAlhwilrnpeqRSTVFQGVARVLRPGGRFVA 134
                 567888999***************999999855.444443.555.789999999988666665444445677888888899998874 PP

>> TrkA_N  TrkA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   0.00013     0.089      13      49 ..      46      82 ..      40     134 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 0.00013
                HHHHHHHTTEEEEEEESSHHHHHHHHHTTSEEEES-T CS
      TrkA_N 13 laeeLseggkdvvvidkdeerveelreeglevvvgda 49
                l+++L +++k++++id++++ v++++++gle++v  +
  EPX71735.1 46 LTQNLASQCKHITGIDSSPSMVQSAKQKGLEAYVVAG 82
                66778888888******************99776554 PP

>> N6_N4_Mtase  DNA methylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0   0.00085      0.59     178     230 ..      18      71 ..       3      72 .. 0.86
   2 ?    0.1   0.0      0.79   5.4e+02      38      63 ..     118     143 ..     115     196 .. 0.68

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00085
                  HHHHHHHH.HHHS-TT-EEEETT-TTTHHHHHHHHTT-EEEEEESSHHHHHHHH CS
  N6_N4_Mtase 178 vallerlI.klstkkgdivlDpFaGSGtTavaakelgrkfiGieieeeyvelae 230
                    l ++++ kl + + d+vlD  +G G   +  +++ ++  Gi+ +++ v++a+
   EPX71735.1  18 PLLTKEIVkKLALSPQDVVLDLGCGDGVLTQNLASQCKHITGIDSSPSMVQSAK 71 
                  567788887788999**********************************99987 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.79
                  HHHHHHHHEEEEEEEEEEE-CCCHHT CS
  N6_N4_Mtase  38 vlkevrrvLkddgsifiniddseikk 63 
                  v++ v rvL ++g ++  ++     +
   EPX71735.1 118 VFQGVARVLRPGGRFVAECGAFGNVS 143
                  67789999999999999998765544 PP

>> Pox_MCEL  mRNA capping enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0    0.0064       4.4     145     183 ..      95     133 ..      12     138 .. 0.60
   2 ?   -1.3   0.0       1.3   8.9e+02     252     300 ..     175     223 ..     161     250 .. 0.66

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0064
    Pox_MCEL 145 kfdivslQFaiHYsFeseekartvlrNvaellasGGkvl 183
                   d v    a+H+     e+  tv++ va++l++GG+++
  EPX71735.1  95 GYDAVFSNAALHWILRNPEQRSTVFQGVARVLRPGGRFV 133
                 344455555667766666666677777777777777775 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 1.3
    Pox_MCEL 252 ealvklaeeYgleL..vdkkdfaeiieesikkelkklikrvskleerkstk 300
                 +a +++ +e g+e+  +++++  ++++++++++l ++ ++    e  +  k
  EPX71735.1 175 QAYTSMLNEAGFEItfIENVTRPTYLDRDVRQWLDTFAHNFY--EAFPHLK 223
                 566777777666542278888889999999999888888776..5555444 PP

>> FtsJ  FtsJ-like methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.1    0.0017       1.2      11      57 ..      23      65 ..      19     160 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.0017
                HHHHHHT-S-TT-EEEECT-TTSHHHHHHCCT.T.-SEEEEEESSSS CS
        FtsJ 11 eidekfklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm 57
                ei +k   ++p++ v+Dlg++ G  +q l+ ++   +++ ++D  p 
  EPX71735.1 23 EIVKKLA-LSPQDVVLDLGCGDGVLTQNLASQC---KHITGIDSSPS 65
                5666776.779999***************9996...57999998775 PP

>> TehB  Tellurite resistance protein TehB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00026      0.18      29     128 ..      30     130 ..       7     137 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00026
                 S-S-E.EEEES-TTSHHHHHHHHTT-EEEEEES-HHHHHHHHHHHHHTT-TTEEEEE--GGG--.-.-S-EEEEEEESSGGGS..-GGGHHHHHHHHHH CS
        TehB  29 vkpgk.vldlgcgqgrnslylsllgydvtawdknensiafleeikekenlknistalydineak.l.derydfilstvvlmfl..eaeripsiienmqe 122
                 ++p   vldlgcg+g  +  l+ +  ++t +d   +    +++ k+k  l++   a  ++ +a+ + +e yd ++s   l ++  ++e+ +++ + + +
  EPX71735.1  30 LSPQDvVLDLGCGDGVLTQNLASQCKHITGIDSSPSM---VQSAKQK-GLEAYVVAGEKLASATeFpSEGYDAVFSNAALHWIlrNPEQRSTVFQGVAR 124
                 45654279***********************976544...3433333.344444444455444322378899999887765432267777888888888 PP

                 TEEEEE CS
        TehB 123 ctkvgg 128
                   ++gg
  EPX71735.1 125 VLRPGG 130
                 777777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       581  (0.0324056); expected 358.6 (0.02)
Passed bias filter:                      557  (0.031067); expected 358.6 (0.02)
Passed Vit filter:                        84  (0.00468515); expected 17.9 (0.001)
Passed Fwd filter:                        26  (0.00145016); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              26  [number of targets reported over threshold]
# CPU time: 0.53u 0.31s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 1739.89
//
Query:       EPX71736.1  [L=218]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.9e-15   55.3   0.0    3.6e-14   53.2   0.0    2.1  2  DUF2406   Uncharacterised protein (DUF2406)


Domain annotation for each model (and alignments):
>> DUF2406  Uncharacterised protein (DUF2406)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.2   0.0     2e-18   3.6e-14       7      64 .]      23      77 ..      17      77 .. 0.75
   2 ?   -1.4   0.0      0.22   3.9e+03      50      59 ..     126     135 ..     122     139 .. 0.81

  Alignments for each domain:
  == domain 1  score: 53.2 bits;  conditional E-value: 2e-18
     DUF2406  7 Pfeqaadklslaalrsiqrsy..kDvfGkeiadpDlSNPtRsRdERPLdTIRsFeaaieG 64
                P +  + ++++      +r y  +D  Gk+i +pD SNPtR ++ERPL+TIR+++  i+G
  EPX71736.1 23 PYARVNRESTKL----CKR-YlkRDYSGKSIYQPDSSNPTRWKYERPLETIRAWNNVIDG 77
                555443322222....222.2339********************************9998 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.22
     DUF2406  50 RPLdTIRsFe 59 
                 RPL T+ s+ 
  EPX71736.1 126 RPLSTVPSLA 135
                 9****98875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       349  (0.0194657); expected 358.6 (0.02)
Passed bias filter:                      249  (0.0138881); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 1566.70
//
Query:       EPX71737.1  [L=150]
Description: hypothetical protein SOCG_03673 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.024   15.2   0.0      0.049   14.2   0.0    1.5  2  OAD_gamma  Oxaloacetate decarboxylase, gamma chain


Domain annotation for each model (and alignments):
>> OAD_gamma  Oxaloacetate decarboxylase, gamma chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   2.7e-06     0.049      12      57 ..       3      48 ..       2      71 .. 0.82
   2 ?   -3.0   0.0      0.63   1.1e+04      70      70 ..     104     104 ..      82     113 .. 0.54

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.7e-06
   OAD_gamma 12 gvVFvvLilLslvislfskiikkkakkkkkkakaaaaaaaaaaaaa 57
                 +VF++ +l+ lv+s++ +i + + k+ +++  +a++ +++ ++++
  EPX71737.1  3 FFVFAGFALIALVVSFVMMIHNYFLKRRQRATGQAKPTSRTRPSES 48
                69**********************9999999999999988777654 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 0.63
   OAD_gamma  70 a 70 
                 +
  EPX71737.1 104 T 104
                 2 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       814  (0.0454013); expected 358.6 (0.02)
Passed bias filter:                      647  (0.0360868); expected 358.6 (0.02)
Passed Vit filter:                        85  (0.00474092); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.44
# Mc/sec: 1032.74
//
Query:       EPX71738.1  [L=356]
Description: F-box protein Pof7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-05   24.7   1.2    1.5e-05   24.7   1.2    2.3  2  F-box-like    F-box-like
    0.00044   20.1   1.2    0.00098   18.9   1.2    1.7  1  F-box         F-box domain
  ------ inclusion threshold ------
      0.014   14.3   0.1      0.025   13.4   0.1    1.4  1  BRO1          BRO1-like domain
      0.076   13.0   0.1       0.24   11.4   0.1    1.8  1  F-box-like_2  F-box-like domain


Domain annotation for each model (and alignments):
>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   1.2   3.4e-09   1.5e-05       1      46 [.     109     158 ..     109     159 .. 0.88
   2 ?   -0.4   0.1      0.24   1.1e+03      27      37 ..     205     215 ..     201     221 .. 0.75

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 3.4e-09
  F-box-like   1 isrLPdEiLlqIFsy....L.ppsdLlrlalVCrrWrrvaldtplLWrrlv 46 
                 i+ LPdE+Ll I ++    L ++s L r+a+ C+  + +++ + +L+rr +
  EPX71738.1 109 ILKLPDEVLLLIVEQcfenLnDLSNLPRIARSCKLLAKACRAD-SLYRRFC 158
                 578**********7544458789999999***********999.*****98 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.24
  F-box-like  27 VCrrWrrvald 37 
                 VCr++r  ++d
  EPX71738.1 205 VCRYFRPGTSD 215
                 9****966555 PP

>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   1.2   2.2e-07   0.00098       3      47 ..     109     158 ..     107     159 .. 0.95

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 2.2e-07
                 HHHS-HH....HHHHHHHTS-HHH.HHHHCTT-HHHHHHHTTHHHHHHHH CS
       F-box   3 lsrLPse....vlrhILerLplsd.llalrrVSkgwrilidsdrlwcksi 47 
                 ++ LP+e    ++++++e+L+  + l +++r +k + ++++ d+l+++++
  EPX71738.1 109 ILKLPDEvlllIVEQCFENLNDLSnLPRIARSCKLLAKACRADSLYRRFC 158
                 899****9999999*****99999************************99 PP

>> BRO1  BRO1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   5.5e-06     0.025     256     291 ..      21      70 ..      18     108 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 5.5e-06
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..............X CS
        BRO1 256 kAlaqyrqalaaeeakkyGeeiarlqkAlellkea..............l 291
                 kAl +yr a+++e++  +G+++ r++ A+++++ +              +
  EPX71738.1  21 KALLHYREAVESEKQGDIGNSLNRYRLAHKVHEDVeviyrrierlaiqnN 70 
                 799******************************99777777766554321 PP

>> F-box-like_2  F-box-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   5.3e-05      0.24      22      55 ..     109     184 ..      98     200 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 5.3e-05
  F-box-like_2  22 llDlPdellelifkgCk..........................................dpayeplspslakayrr 55 
                   +l lPde+l li ++C                                           ++  e ++  l  +y +
    EPX71738.1 109 ILKLPDEVLLLIVEQCFenlndlsnlpriarsckllakacradslyrrfcyfsyqlnewQQTKESIEEELSSTYHQ 184
                   799*************988888888888888888888888876666666666666665544444455555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       854  (0.0476323); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2602.41
//
Query:       EPX71739.1  [L=646]
Description: U3 associated protein Utp25 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.4e-195  650.6  11.4   1.9e-195  650.2  11.4    1.2  1  UTP25     Utp25, U3 small nucleolar RNA-associated SSU proces
     0.0057   17.0   1.9      0.015   15.7   1.9    1.6  1  DUF2681   Protein of unknown function (DUF2681)
  ------ inclusion threshold ------
       0.11   12.6   0.0         12    6.1   0.0    2.7  2  bPH_5     Bacterial PH domain


Domain annotation for each model (and alignments):
>> UTP25  Utp25, U3 small nucleolar RNA-associated SSU processome protein 25
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  650.2  11.4  3.1e-199  1.9e-195       2     473 .]     182     645 ..     181     645 .. 0.99

  Alignments for each domain:
  == domain 1  score: 650.2 bits;  conditional E-value: 3.1e-199
       UTP25   2 elqkellsilfsYkDllyeekslkdeeevrklyalHalnHvlktrdrvlknneklaklkessddlelrdqgftrpkvLillptreaalevvelllklle 100
                 ++q e+++++f+Y+D+++++ ++k+++ + +lyalH+lnHv+ktrdr+lkn ++l+    ++++le+rdqg+trpkvL+llptr+++le++++l+++++
  EPX71739.1 182 TMQMEIAKHMFNYQDVFFTNMNFKSHKLIVSLYALHSLNHVFKTRDRILKNSARLS----QNPELEFRDQGYTRPKVLVLLPTRNSCLEFINTLISYSG 276
                 6899**************************************************99....789************************************ PP

       UTP25 101 aetqvenkkrFkdefseeeeesseskpkdfqalFkgNtddaFrlGlkftrkslklyskfyssdiiiaSPlglrliieeedkkkrdtdfLsSiEvlivdq 199
                 a+ qv n+krF+d+fs e+e  se+kp+df+ lF+gNtdd+Fr+G+kftrk++kl+s+fy+sdii+aSPlglrl+i+++ +kkrd dfLsSiEv i+dq
  EPX71739.1 277 AD-QVANRKRFEDDFSIEKEVISEKKPEDFRYLFAGNTDDMFRIGIKFTRKTIKLFSQFYNSDIIVASPLGLRLAIGNKGDKKRDLDFLSSIEVSIIDQ 374
                 **.**************************************************************************9999****************** PP

       UTP25 200 advlemQnwehvetvlkhlnkipkeshdadfsrvrmwylddqakllRQtlvfssyetpeinslfnskleNlaGkvkvkkvvkggslekvglkvrqvFqr 298
                 ad+l mQnweh+e +++++n++p+e+hd+dfsrvr+wyld+q+k++RQt++fs+y+  +ins+f++++ N+aGkvk+++  +g  l+++g+k++q++ r
  EPX71739.1 375 ADALYMQNWEHIEAIFDEINNLPREAHDCDFSRVRPWYLDQQSKYMRQTVLFSQYNALDINSFFSHYMLNVAGKVKFRTLNRG-ILNQLGYKIKQTYVR 472
                 ******************************************************************************99999.*************** PP

       UTP25 299 fdaesivdepdarfkfftekilpqlkkssskssgiliyipsyfdfvrvrnylkeekvsfaaiseysskkevsraRelFfkgkkkvlLyteRlhffrRyk 397
                 ++++siv+ pdarf +f++++lp+l+k  s ++gil+y+psyfdfvr+rn++++e +s++aiseyss+++++raR+lF+++k+k+lLyteR+h+frR++
  EPX71739.1 473 VSSDSIVKLPDARFFYFINSVLPHLVK--SPQGGILVYVPSYFDFVRIRNHMDDEAISYSAISEYSSTSDLTRARTLFQQSKTKILLYTERAHHFRRFD 569
                 ***************************..89******************************************************************** PP

       UTP25 398 ikgvkkvilYklPenpefyselvrfleksvkeeeadsaevsvrvlyskydalaLerivGseraakllkskkevyef 473
                 i+gvk ++++ +P+np++y el+r+  +s +e++ d++++++r+l+skyd+++Le ivG +r+ +++++++ev+ef
  EPX71739.1 570 IRGVKAIVMFAPPTNPQYYVELARMPMRSITEGKLDQDAAKCRILFSKYDSISLEGIVGFQRVPNMCHGRHEVFEF 645
                 **************************************************************************99 PP

>> DUF2681  Protein of unknown function (DUF2681)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   1.9   2.5e-06     0.015      21      80 ..      24      82 ..      16      86 .. 0.87

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 2.5e-06
     DUF2681 21 lswqlkkarkknaklqaekqqlkvekavaeaevknakvkqkneentrrlsrdsvddqLhq 80
                l+  ++  +k+  +++ e++ l   k+ +++ ++   +  +nee+ ++ + ++++d L +
  EPX71739.1 24 LY-LMHNRKKRKPEKKSENEDLPKHKEKKNKVIEKLDEPDTNEEENESYEEKEIIDALAH 82
                44.45677788889999***************************************9964 PP

>> bPH_5  Bacterial PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0     0.013        75       6      40 ..     129     166 ..     125     188 .. 0.81
   2 ?    6.1   0.0     0.002        12      10      66 ..     516     580 ..     514     593 .. 0.69

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.013
       bPH_5   6 deeglvIrwifg...keeIplseIeavrvsegvikgvr 40 
                 +e++l I+ if    +e+Ip+++I +   ++++  ++r
  EPX71739.1 129 EETKLGISQIFTpetEEKIPYNCIPKSDNVSDLGLKQR 166
                 6889999999999999********98888777765555 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.002
       bPH_5  10 lvIrwifgkeeIplseIeavrvsegvi........kgvrlfgtskpgyalGrfkikdigkarmya 66 
                 ++Ir  ++ e I++s I +++  ++++        ++ ++ +++ +  ++ rf i++++ + m+a
  EPX71739.1 516 VRIRNHMDDEAISYSAISEYSSTSDLTrartlfqqSKTKILLYTERAHHFRRFDIRGVKAIVMFA 580
                 6899999**************99999834334333445555555555666666666666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (646 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1451  (0.0809303); expected 358.6 (0.02)
Passed bias filter:                      590  (0.0329076); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.67u 0.29s 00:00:00.96 Elapsed: 00:00:00.45
# Mc/sec: 4354.03
//
Query:       EPX71740.1  [L=373]
Description: cholinephosphate cytidylyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.3e-32  111.7   0.1    7.3e-32  110.5   0.0    1.7  2  CTP_transf_like  Cytidylyltransferase-like
    0.00023   21.0   1.0    0.00035   20.4   1.0    1.3  1  CagX             Conjugal transfer protein
  ------ inclusion threshold ------
        8.5    5.0   5.7         12    4.6   5.7    1.2  1  Presenilin       Presenilin


Domain annotation for each model (and alignments):
>> CTP_transf_like  Cytidylyltransferase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.5   0.0   1.2e-35   7.3e-32       1     143 []     107     235 ..     107     235 .. 0.98
   2 ?   -3.4   0.0       1.7   9.9e+03      47      60 ..     268     281 ..     258     290 .. 0.61

  Alignments for each domain:
  == domain 1  score: 110.5 bits;  conditional E-value: 1.2e-35
                      EEEE--TT--HHHHHHHHHHHHHSSES.EEEEEESSTHCSST-.SCSSTHHHHHHHHHHHTTCTTEEEEEEESEHHHHHHHTTTTEEEEEEEHH CS
  CTP_transf_like   1 lagGtFDpiHlGHlrlleqakklleed.livgvpsdeppkkkk.kplasaeeRlemlelakevdevisvdpweltrevlkklkpdklylvigad 92 
                      +a+G+FD++H+GH+r+leqakk + +  livg+p+d+ +++ k  ++++ +eR e l+++k+vdev++ +pw++t+++l+++k+d  +++++++
       EPX71740.1 107 YADGVFDLFHIGHMRQLEQAKKVFPNVhLIVGLPNDKLTHRLKgLTVMNDKERAEALRHCKWVDEVVESAPWVITPDFLEEHKID--FVAHDDI 198
                      79****************************************77*****************************************..******* PP

                      HHHHHHCHHHHHHHHHHHHHEEEEEEHTTCEEEEEEECCTTTCSHHHHHHH CS
  CTP_transf_like  93 vledfsewkeleeilgnvklvvvsrpekqanvllkaekrtngiSstkirer 143
                      ++++     +  +i+  vk v++          ++++krt+g+S++++++r
       EPX71740.1 199 PYASD----DSGDIYLPVKKVGK----------FIPTKRTEGVSTSDLITR 235
                      ***97....**************..........**************9976 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 1.7
                      THHHHHHHHHHHTT CS
  CTP_transf_like  47 saeeRlemlelake 60 
                      +  + ++ml+ a++
       EPX71740.1 268 DFRHHIKMLRDAIR 281
                      55566666666644 PP

>> CagX  Conjugal transfer protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   1.0   5.9e-08   0.00035      79     170 ..       4     136 ..       3     157 .. 0.80

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 5.9e-08
        CagX  79 feLrstekekkklmyrvsfrypdeeaaaaaaaaaaaaaekkeaqek....................................apeklnfdYsvsgsaei 141
                 +eLr +e ++k+ +  v+f+  ++  +++a++ + ++++++e++e+                                    +++  +f+Y +++ ++ 
  EPX71740.1   4 IELRKDE-SAKRPIENVNFSEDEDSVKQQAKKVTINNSKEEEKSESniedqnstddsnedqttpsyptsdtdedeahsevkfKEQYSQFNYPINEPPSD 101
                 6788888.889999999999999999999555555555555555556777778899999999*******************9999999******99*** PP

        CagX 142 aPervfdDgrfTyirfp......sankelPavfvv 170
                 +P+rv+ Dg f  +++       +a+k +P v ++
  EPX71740.1 102 RPVRVYADGVFDLFHIGhmrqleQAKKVFPNVHLI 136
                 ***********999987666665666666666655 PP

>> Presenilin  Presenilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   5.7     0.002        12     236     290 ..      23      78 ..       3     125 .. 0.42

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.002
  Presenilin 236 eeeeeaekkkeeas.esskeeeseeesseksaqsseseeeseeesseaessaeess 290
                 e+e++ ++++++ + ++skeee++e++ e+++++++s+e++++ s ++++++e ++
  EPX71740.1  23 EDEDSVKQQAKKVTiNNSKEEEKSESNIEDQNSTDDSNEDQTTPSYPTSDTDEDEA 78 
                 11111111111111011111111111111111111122222222221111111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (373 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1685  (0.0939818); expected 358.6 (0.02)
Passed bias filter:                      693  (0.0386525); expected 358.6 (0.02)
Passed Vit filter:                        82  (0.0045736); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.63u 0.32s 00:00:00.95 Elapsed: 00:00:00.49
# Mc/sec: 2277.69
//
Query:       EPX71741.1  [L=511]
Description: acetyl-CoA ligase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.4e-86  290.7   0.0    1.8e-86  290.4   0.0    1.1  1  AMP-binding    AMP-binding enzyme
    8.6e-14   52.3   0.0    1.8e-13   51.3   0.0    1.6  1  AMP-binding_C  AMP-binding enzyme C-terminal domain
    0.00027   19.9   0.0     0.0017   17.3   0.0    1.9  2  GH3            GH3 auxin-responsive promoter


Domain annotation for each model (and alignments):
>> AMP-binding  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  290.4   0.0   3.1e-90   1.8e-86      11     422 ..      16     410 ..       9     411 .. 0.87

  Alignments for each domain:
  == domain 1  score: 290.4 bits;  conditional E-value: 3.1e-90
                  SEEEEECCSTEEEEHHHHHHHHHHHHHHHHHTTSSTT-EEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS-HHHHHHHHHHHTESEEEETCTCCCHH CS
  AMP-binding  11 kvalvdsgegqtlTYreldervnrlAagLrslGvkkgdrVaillpnspewvvallailkaGavvvplnptltaeelayiledseakvliatvdselle 108
                  ++al   ++  tl+Y+el+ ++  l + +  lG+k  d V i++pn++e+vv+++a+    av+ pln+++++ e ++ ++d ++k+++  v++  +e
   EPX71741.1  16 ARALAAPASSATLSYSELRIAIMDLQRQIAGLGIKTSDPVNIAVPNGLEFVVSFYAVSWQRAVCGPLNSNYKQSEFEFYIDDLKSKLVF--VSKGSIE 111
                  44554466899******************************************************************************..7777744 PP

                  HHHHHHSCC-EECEEEEESCCS-HCCHCCCHCCCCSCTTS-TSCCCS-BTTSEEEEEEE--SSSS-EEEEEEHHHHHHHHHHHHHHHCSCCTTT-EEE CS
  AMP-binding 109 klleaaakleavklvivldadellkeeelkeeeeseekaekpeeeeelkpddlayiiYTSGTTGkPKGVmlshrnlvanvaslkletrfklkeddvvl 206
                  ++ +a  + ++  +v v +   +++++ +k+   + ++   p++   +++dd+ +++ TSGTTG+PK V l+hrnl++++++++     +l+++d+ +
   EPX71741.1 112 ANTPAVRAAKKL-SVAVAELSWCPESRLVKIVRVEGSNPSSPQPLGLPHADDITLVLHTSGTTGRPKVVPLTHRNLCQSTKNIS--ASYRLSPRDTSY 206
                  444444332222.22333333444444444444333333246677789**********************************85..33557799**** PP

                  ESS-TTSCHHHHHHHHHHHHTT-EEEE-TTCGCCHHHHHHHHHHHHT-SEEEEEHHHHHHHHHCCCHHCHHHHCCGTT-SEEEEESS-EBHHHHHHHH CS
  AMP-binding 207 silplahifglilelllallsGatvvllpkdaaldpklllelieklkvtviagvPrvleallesgalkaakkakdlsslrlvllggeplspellrffr 304
                  +++pl+h+ gl ++ll++l+sG++ v++p++++   k+++++++++++t  ++vP++ + ll+ + ++       l+ +r++ ++ +pl p +lr+++
   EPX71741.1 207 VVMPLFHVHGLLCGLLATLASGGAAVVPPRFSP---KTFWKDFTQYEATWYTAVPTIHQILLRIPLPN------PLPIIRFIRSCSSPLAPPVLRKLE 295
                  ***************************998876...567799999******************77777......9*********************** PP

                  HHHTCEEEEEEEEGGGSSECEECHCTTTCTSTTS-BEE-TTEEEEEE-TTTSCBEETTSEEEEEEEETTS-SEBTT-HHHHHHHEEETCCEEEEEEEE CS
  AMP-binding 305 alfgeevlegYGlTEttgvvtvlpleedkkklgsvGkplpgvevkivDeetgepvpdgeeGellvrgpgvmkgYlkkpeataeafdsegrwlrTGDlg 402
                  + f+ +vle+Y +TE+++ +t++pl+  ++k++svG p  gv++ki+D + g++vp+g eGe++vrg +v+kgYl++ ea++++f+ e++++rTGD g
   EPX71741.1 296 KAFKAPVLEAYAMTEASHQMTTNPLPPLTHKPKSVGVP-FGVDLKILDAK-GKEVPQGSEGEICVRGINVTKGYLNNAEANKSSFT-EEGFFRTGDQG 390
                  ********************99777788889*******.7********98.9*********************************9.657******** PP

                  EEETTSEEEEEEECCCEEEE CS
  AMP-binding 403 rldedGyleivgRkkdlikl 422
                  ++d++G ++i+gR+k+l+++
   EPX71741.1 391 KVDAEGFVFITGRIKELVNR 410
                  *****************986 PP

>> AMP-binding_C  AMP-binding enzyme C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.3   0.0   2.9e-17   1.8e-13       1      76 []     419     494 ..     419     494 .. 0.88

  Alignments for each domain:
  == domain 1  score: 51.3 bits;  conditional E-value: 2.9e-17
                    HHHHHHHSSTTEEEEEEE-----TTS---EEEEEE------HHHHHHHHHHHHT-TTTS-SEEEE-S---B-TTS- CS
  AMP-binding_C   1 evEsalvshpaVaeaaVvGvpdevkGealvafVvlkdgsealeeeLkahvrkelgpyavpkkvvfvdelpktrsGK 76 
                    e+ ++l++hp+V ea++++vpde+ G+ +   +   +g++   +eL++++++++++++ pkk++f+d++pkt++GK
     EPX71741.1 419 EIDAVLMQHPNVTEAVCFAVPDEKYGQDIQSAIHTTSGKSVSVKELQSFLAQRVAEFKIPKKFYFTDKIPKTATGK 494
                    89************************66555554434643357********************************9 PP

>> GH3  GH3 auxin-responsive promoter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   2.8e-07    0.0017      73     117 ..     160     202 ..     155     220 .. 0.82
   2 ?   -0.1   0.0     0.053   3.1e+02     393     436 ..     400     439 ..     392     471 .. 0.79

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 2.8e-07
                 SSS-SEEEEECCEETTEEEEEEESHHHHHHHHHH.HHHHHHHHHH CS
         GH3  73 sepiklfalsSGTtsgksKliPvteeslkelallvlallaallsr 117
                 ++ i+l + +SGTt g++K++P t+++l + ++  +++++ l +r
  EPX71741.1 160 ADDITLVLHTSGTT-GRPKVVPLTHRNLCQSTKN-ISASYRLSPR 202
                 57899*********.***********99987765.6777666654 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.053
                 EEECCTEEE-SSSS-CCHHHHHHHHH.HHHHHTT-EEEEEEEEE CS
         GH3 393 FvgRknvvlsidgeklteeelqkaveeaakeltglelvdftsfa 436
                 ++gR +++++  gek++  e+++++ +  +    +e v f++ +
  EPX71741.1 400 ITGRIKELVNRGGEKISPAEIDAVLMQHPNV---TEAVCFAV-P 439
                 679*******************999954433...56666666.3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (511 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       446  (0.0248759); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.61u 0.25s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 3426.33
//
Query:       EPX71742.1  [L=247]
Description: hypothetical protein SOCG_03678 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.5e-44  151.1   1.1      3e-44  150.8   1.1    1.1  1  adh_short        short chain dehydrogenase
      2e-37  129.0   0.3    2.4e-37  128.7   0.3    1.0  1  adh_short_C2     Enoyl-(Acyl carrier protein) reductase
    8.3e-08   32.3   0.7    1.2e-07   31.9   0.7    1.2  1  KR               KR domain
    0.00034   20.1   0.0     0.0016   17.9   0.0    1.8  2  DUF1776          Fungal family of unknown function (DUF1776)
     0.0065   16.0   0.2      0.079   12.4   0.2    2.3  1  Epimerase        NAD dependent epimerase/dehydratase family
  ------ inclusion threshold ------
      0.037   13.8   0.1      0.068   12.9   0.1    1.5  1  Eno-Rase_NADH_b  NAD(P)H binding domain of trans-2-enoyl-CoA 
       0.13   11.5   1.8       0.44    9.9   0.3    2.2  2  THF_DHG_CYH_C    Tetrahydrofolate dehydrogenase/cyclohydrolas


Domain annotation for each model (and alignments):
>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.8   1.1   1.2e-47     3e-44       1     193 [.       7     192 ..       7     194 .. 0.89

  Alignments for each domain:
  == domain 1  score: 150.8 bits;  conditional E-value: 1.2e-47
                 SEEEEESTTSHHHHHHHHHHHHTT-EEEEEESC.HHHHHHHHHHHHHTTSEEEEEE-TTTSHHHHHHHHHHHHHHHSSESEEEE---S.S--SSGGGCS CS
   adh_short   1 kvvlvtGassGIGraiakelakeGakvvvvdrs.eekleevakelkeegakalaiqvDvtdreevealvekavkklgkldvLvnNAGi.tgsgpfsels 97 
                 kvvl tGas+GIG+a+a++l ++  kvv+v+rs  ++le+++ +     ++++++q+Dv+  e ++  v++a+kk+g+ld+++ NAG+ +  +++++ +
  EPX71742.1   7 KVVLLTGASKGIGLATAQALRAK-SKVVAVSRSlTKELETLLLQH---PDSFVHVQGDVS--ETAKSSVDTAIKKFGRLDAIILNAGLvEPISKIEDAD 99 
                 89*****************9998.556665555045555555555...567********9..778899********************88889999999 PP

                 HHHHHHHHHHHTHHHHHHHHHHHHHHHHCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHHHHHHCTH CS
   adh_short  98 eeewervievNltgvflltravlpamlkqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdmakelrek 193
                  ++w+++++vN+++v++++++++p+ l++ +G+Iv vsS a+  +++ ++aYs+sKaav++l++sl  e ++  i  +av PG+vdT+m+  +r++
  EPX71742.1 100 VNQWKKLFDVNFFSVVETIKQAIPH-LRKAKGSIVVVSSGAAVRAYPAWTAYSTSKAAVNMLVMSLGSEEKD--IMSVAVRPGVVDTPMQDIIRNE 192
                 999**********************.669***************************************9877..99*************9887766 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.7   0.3   9.3e-41   2.4e-37       1     226 [.      13     239 ..      13     242 .. 0.90

  Alignments for each domain:
  == domain 1  score: 128.7 bits;  conditional E-value: 9.3e-41
                   TTTTSHHHHHHHHHHHTT-EEEEEESSGGHHHHHHHHHHHTTSE.E.EE--TTSHHHHHHHHHHHHHHHSSEEEEEE-----EGCSS-GGGH-HHHH CS
  adh_short_C2   1 GaasgIGraiAkalaeeGaevvltdlneeakkrveelaeelgae.v.lecDVtdeeqvealveevvekfgklDilvnnagiapklkgpfletsreef 95 
                   Ga +gIG a+A+al ++   v+++    ++   +e+l  +++ + v ++ DV++  + ++ v+++ +kfg+lD ++ nag +++  +++++++ +++
    EPX71742.1  13 GASKGIGLATAQALRAKSKVVAVSRSLTKE---LETLLLQHPDSfVhVQGDVSE--TAKSSVDTAIKKFGRLDAIILNAGLVEP-ISKIEDADVNQW 103
                   899***********9998877777655555...999999999994478888875..66899***********************.99********** PP

                   HHHHHHHTHHHHHHHHHHHHHCTSC.CEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCTGGGGSTT......H CS
  adh_short_C2  96 draldvnlyslfllakaalplmkeg.gsivnlssvgaervvpnynaygaaKaalealtrylAvelgpkgiRvNavspgpikTlaasgikg......f 185
                   ++ +dvn+ s++ ++k+a+p++++  gsiv +ss +a r+ p  +ay+++Kaa++ l+ +l  e   k i   av pg+++T++++ i++      +
    EPX71742.1 104 KKLFDVNFFSVVETIKQAIPHLRKAkGSIVVVSSGAAVRAYPAWTAYSTSKAAVNMLVMSLGSEE--KDIMSVAVRPGVVDTPMQDIIRNeqnkpaM 198
                   ********************665555************************************995..55***************9999885444444 PP

                   HHHHHHHHHHSTTSS-B-HHHHHHHHHHHCSGGGTT--SEE CS
  adh_short_C2 186 delleelearaplgrlgtpeevaeaalfLasdeasyitGqt 226
                    ++ +++++    g+l++p++va+a  +La + ++ +tGq 
    EPX71742.1 199 GDMHNYFKELKSSGKLVSPHDVAKALTYLALNPSEKVTGQF 239
                   559999*********************************95 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.9   0.7   4.5e-11   1.2e-07       3     175 ..       9     176 ..       7     180 .. 0.84

  Alignments for each domain:
  == domain 1  score: 31.9 bits;  conditional E-value: 4.5e-11
                 EEEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHTT-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE------.---TTT- CS
          KR   3 ylitGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaelealgaevevvaaDvsdkdavealleeikaeeppikGvihaAgvlr.dklleem 100
                 +l+tG+  g+Gl++a+ l   +++++v +sRs   +++   l + l ++  +   v+ Dvs+ ++  + ++++ ++++++  +i  Ag+++  +++e+ 
  EPX71742.1   9 VLLTGASKGIGLATAQALR--AKSKVVAVSRS--LTKE---LETLLLQHPDSFVHVQGDVSETAK--SSVDTAIKKFGRLDAIILNAGLVEpISKIEDA 98 
                 79**************996..5689*******..3444...33455566667777899**98764..66777778999**********9995699**** PP

                 -HHHHHHHHTTTT.HHHHHHHHHTTT..S--SEEEEEEEHHHHH--TT-HHHHHHHHHHHHHHHHHHHHHHTEEEEEE CS
          KR 101 taedleqvlapKv.kGawnLhelled..esldffvlfSSiagllgsagqanYaaaNaflDalaeyrrsqglpavsinw 175
                 + +++++++   + + ++ +++++++  +    +v++SS a++   +  ++Y++  a ++ l+ +  s++   +s++ 
  EPX71742.1  99 DVNQWKKLFDVNFfSVVETIKQAIPHlrKAKGSIVVVSSGAAVRAYPAWTAYSTSKAAVNMLVMSLGSEEKDIMSVAV 176
                 **********9972556789****999788889****************************99999888888888765 PP

>> DUF1776  Fungal family of unknown function (DUF1776)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.22   5.7e+02     140     160 ..      24      44 ..       4      53 .. 0.80
   2 !   17.9   0.0   6.1e-07    0.0016      87     182 ..      74     165 ..      52     200 .. 0.78

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.22
     DUF1776 140 srakqkakiivvnpsisssln 160
                 ++++ k+k++ v+ s++++l+
  EPX71742.1  24 QALRAKSKVVAVSRSLTKELE 44 
                 3448999*********99997 PP

  == domain 2  score: 17.9 bits;  conditional E-value: 6.1e-07
     DUF1776  87 phvlrLkgvilvPslsyptgpietiplsswaselnerllspiltlqallplltsrakqkakiivvnpsissslnlpfhapEalvssalsalfevLk 182
                 +   rL ++il   l  p++ ie   +++w++++  +++s + t+++ +p+l++    k  i+vv+ +      ++  a  ++   a++ l+ +L 
  EPX71742.1  74 KKFGRLDAIILNAGLVEPISKIEDADVNQWKKLFDVNFFSVVETIKQAIPHLRK---AKGSIVVVSSGAAVRAYPAWTAY-STSKAAVNMLVMSLG 165
                 55569************************************************8...78889998877666555555443.344455555555555 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.2   3.1e-05     0.079       1      93 [.       9     108 ..       9     240 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 3.1e-05
                 EEEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC...EEEE--TT-HH..HHHHHHHHH.T-SEEEE--S.---HHHHHHSHHHHHHHHT CS
   Epimerase   1 ilVtGatGfiGsalvkallekgyevigldrlssasntarledl...elveldltdrs..alerlfkee.qpdavihlAa.vggvaassedpadfieknl 92 
                 +l+tGa+  iG a+++al +k   v +  +l+++ +t +l++      v++d+ + +  +++ ++k++ + da+i+ A+ v  ++   +     ++k +
  EPX71742.1   9 VLLTGASKGIGLATAQALRAKSKVVAVSRSLTKELETLLLQHPdsfVHVQGDVSETAksSVDTAIKKFgRLDAIILNAGlVEPISKIEDADVNQWKKLF 107
                 699****************99865666666666666666666598877899997765559*****************9977666555444445554444 PP

                 H CS
   Epimerase  93 q 93 
                  
  EPX71742.1 108 D 108
                 4 PP

>> Eno-Rase_NADH_b  NAD(P)H binding domain of trans-2-enoyl-CoA reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   2.6e-05     0.068      40      67 ..       6      33 ..       1      44 [. 0.76

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2.6e-05
                     -SEEEEESTSSHHHHHHHHHHHHSS--E CS
  Eno-Rase_NADH_b 40 pkkvLviGaStGYGLAsriaaafgagad 67
                      k vL  GaS G GLA+  a+  ++++ 
       EPX71742.1  6 EKVVLLTGASKGIGLATAQALRAKSKVV 33
                     599*************987776665554 PP

>> THF_DHG_CYH_C  Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.3   0.00017      0.44      34      78 ..       4      48 ..       1     124 [. 0.85
   2 ?    0.9   0.0     0.099   2.5e+02      81     122 ..     158     202 ..     130     221 .. 0.55

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00017
                   -TT-EEEEE---TTTHHHHHHHHHCTT-EEEEE-TTSCCHHHHHC CS
  THF_DHG_CYH_C 34 legkkvvvvGrsnivgkplallLleknatVtvchsktkdlaeitr 78
                   +++k v+  G+s+ +g + a+ L +k  +V v  s tk+l++++ 
     EPX71742.1  4 IAEKVVLLTGASKGIGLATAQALRAKSKVVAVSRSLTKELETLLL 48
                   678899999*******************************98753 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.099
                    SEEEE-SS-TT.-B-GGGS-TT-EEEE---EEC....-TTEEE-SB- CS
  THF_DHG_CYH_C  81 divvvavGkpe.likaemvkegavviDvGinrv....ekgklvGDvd 122
                    +++v+++G+ e  i +  v++g  v+D  ++ +    +++  +GD++
     EPX71742.1 158 NMLVMSLGSEEkDIMSVAVRPG--VVDTPMQDIirneQNKPAMGDMH 202
                    3445555543213555555555..44555555445433444666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       695  (0.038764); expected 358.6 (0.02)
Passed bias filter:                      554  (0.0308997); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 1723.84
//
Query:       EPX71743.1  [L=610]
Description: hypothetical protein SOCG_03679 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-57  192.8   0.0    1.5e-56  190.4   0.0    2.2  2  bVLRF1    bacteroidetes VLRF1 release factor
      3e-07   30.6   0.0    6.9e-07   29.4   0.0    1.6  1  Ank_5     Ankyrin repeats (many copies)
    0.00014   22.4   0.3    0.00037   21.0   0.2    1.7  2  Ank_2     Ankyrin repeats (3 copies)
     0.0036   17.9   0.0     0.0083   16.7   0.0    1.6  1  Ank_4     Ankyrin repeats (many copies)
     0.0037   17.7   0.0     0.0095   16.3   0.0    1.7  1  Ank       Ankyrin repeat
     0.0098   16.3   0.0      0.027   15.0   0.0    1.8  1  Ank_3     Ankyrin repeat
  ------ inclusion threshold ------
      0.043   14.3   0.1      0.043   14.3   0.1    3.2  4  zf-C2HE   C2HE / C2H2 / C2HC zinc-binding finger


Domain annotation for each model (and alignments):
>> bVLRF1  bacteroidetes VLRF1 release factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.75   1.9e+03      48      71 ..      79     102 ..      73     115 .. 0.68
   2 !  190.4   0.0   5.8e-60   1.5e-56       2     147 ..     209     361 ..     208     363 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.75
      bVLRF1  48 ndkakgkaksaGaslRryneqalk 71 
                  d ++ +ak+aGasl   ++ ++ 
  EPX71743.1  79 TDWHRFNAKRAGASLPSVSQDEFD 102
                 45555599******9776666654 PP

  == domain 2  score: 190.4 bits;  conditional E-value: 5.8e-60
      bVLRF1   2 vllmlggGhfAgavvslkkkk........eaevlahktfhrYttRrkqGgsQsandkakgkaksaGaslRryneqalkedirellkewkeeiekselif 92 
                 +++mlggGhfA++v s +           + +vla+kt+hrYttRrkqGgsQ a d+akg  +saG+slRryne al +di++l++ewk+ ++k++lif
  EPX71743.1 209 AMFMLGGGHFAAMVASNEA-YgkspqsfaTPKVLAQKTIHRYTTRRKQGGSQGAADNAKGGIHSAGSSLRRYNELALIRDIHQLFNEWKSLLDKCDLIF 306
                 89**************443.3699*************************************************************************** PP

      bVLRF1  93 irasgksnrkilfgyeeavlkkkdprlrsiPfttrrptlselkrvleeltrvkvs 147
                 +ra g+snr+i+f++++++++ kdprlr++Pftt+r+t+sel r+++el++ k+s
  EPX71743.1 307 VRAIGASNRSIFFSQSDPLVNPKDPRLRTFPFTTKRATHSELLRCYKELVTPKIS 361
                 **************************************************99987 PP

>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4   0.0   2.7e-10   6.9e-07      13      55 ..     440     482 ..     433     483 .. 0.90

  Alignments for each domain:
  == domain 1  score: 29.4 bits;  conditional E-value: 2.7e-10
       Ank_5  13 dgggntpLhvAakygaadvvrlLlargadlnltdsrGltaldl 55 
                  ++  +pLh+A+ +g++ +v +Ll +gad+++++++++t++++
  EPX71743.1 440 HNHTSSPLHYAVAQGNSKLVARLLREGADPTVQNGNNKTPYEI 482
                 45566************************************98 PP

>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       6.7   1.7e+04      46      62 ..     195     211 ..     191     220 .. 0.62
   2 !   21.0   0.2   1.4e-07   0.00037      26      83 .]     403     473 ..     383     473 .. 0.76

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 6.7
       Ank_2  46 leh.adndgrtpLhyAar 62 
                 le+ ++ + + pL++A +
  EPX71743.1 195 LEYqIE-NQKKPLQVAMF 211
                 444333.45668888865 PP

  == domain 2  score: 21.0 bits;  conditional E-value: 1.4e-07
       Ank_2  26 gktaLhyAakngnl.eivklLleh..........ad..ndgrtpLhyAarsghleivklLlekgadinlkd 83 
                 +  aL ++ k+++l +++k+L  +          ++  n+  +pLhyA+ +g++++v  Ll  gad+++++
  EPX71743.1 403 HTDALLTSLKANKLeDALKYLELNalsinfrfhpLNvhNHTSSPLHYAVAQGNSKLVARLLREGADPTVQN 473
                 4678888999887768899996423444455567445588889******************88****9986 PP

>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   3.2e-06    0.0083       2      38 ..     444     479 ..     443     480 .. 0.92

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 3.2e-06
       Ank_4   2 ltaLhyaaisgrlelvrlLlekgadinaqdnrsGeta 38 
                 +++Lhya+++g+ +lv++Ll  gad+  q n++  t+
  EPX71743.1 444 SSPLHYAVAQGNSKLVARLLREGADPTVQ-NGNNKTP 479
                 689*****************88*******.9998886 PP

>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   3.7e-06    0.0095       4      31 ..     445     473 ..     444     473 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 3.7e-06
                 BHHHHHHHHTT.HHHHHHHH.TTTSTTCBT CS
         Ank   4 TPLHlAatngk.kriiklLL.hGAnlnald 31 
                 +PLH+A+  g+ k +++ LL  GA+++ ++
  EPX71743.1 445 SPLHYAVAQGNsKLVAR-LLrEGADPTVQN 473
                 7*****95566266666.7868****9887 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   1.1e-05     0.027       3      29 ..     444     469 ..     442     471 .. 0.91

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 1.1e-05
       Ank_3   3 etpLhlAarsgnleivkfLlenkgadv 29 
                  +pLh+A+ +gn ++v  Ll+  gad+
  EPX71743.1 444 SSPLHYAVAQGNSKLVARLLR-EGADP 469
                 59*******************.7**98 PP

>> zf-C2HE  C2HE / C2H2 / C2HC zinc-binding finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.1   1.7e-05     0.043      17      63 ..      36      82 ..      22      83 .. 0.79
   2 ?   -1.7   0.1       1.6     4e+03      55      63 ..     128     136 ..     128     160 .. 0.80
   3 ?   -2.2   0.3       2.4   6.1e+03      15      39 ..     376     400 ..     367     411 .. 0.65
   4 ?   -1.7   0.2       1.6   4.2e+03      29      29 ..     542     542 ..     516     590 .. 0.58

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.7e-05
     zf-C2HE 17 kdgeieslseeqskelilktpLkCtrCganfgnkfpkLKeHLeeefe 63
                ++++ e+  e + +    k  L Ct Cg n  n++ + K+H ++ + 
  EPX71743.1 36 ANEDTENARESRITDPTQKNVLSCTVCGINDLNNLENRKQHVKTDWH 82
                444444455566666778899***********************996 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.6
     zf-C2HE  55 KeHLeeefe 63 
                 K+HLe+ f+
  EPX71743.1 128 KAHLEKAFQ 136
                 788888776 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 2.4
     zf-C2HE  15 lekdgeieslseeqskelilktpLk 39 
                 +++++e++++++e  ++l ++++L 
  EPX71743.1 376 MKENEERKIIEKEARDKLEKEKKLL 400
                 4566666666666666665555554 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 1.6
     zf-C2HE  29 s 29 
                 +
  EPX71743.1 542 Q 542
                 2 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (610 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2804  (0.156395); expected 358.6 (0.02)
Passed bias filter:                      701  (0.0390987); expected 358.6 (0.02)
Passed Vit filter:                        79  (0.00440627); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.77u 0.31s 00:00:01.08 Elapsed: 00:00:00.47
# Mc/sec: 3916.26
//
Query:       EPX71744.1  [L=280]
Description: MKI67 FHA domain-interacting nucleolar phosphoprotein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.6e-16   59.8   0.0    3.8e-16   58.7   0.0    1.7  1  RRM_1        RNA recognition motif. (a.k.a. RRM, RBD, or RNP 
  ------ inclusion threshold ------
      0.016   15.1   0.1      0.032   14.2   0.1    1.6  1  RL           RL domain
      0.036   13.7   0.1      0.077   12.6   0.1    1.5  1  RRM_5        RNA recognition motif. (a.k.a. RRM, RBD, or RNP 
       0.19   11.8   0.2       0.59   10.2   0.1    1.9  2  Nup35_RRM_2  Nup53/35/40-type RNA recognition motif


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.7   0.0   8.4e-20   3.8e-16       1      69 [.     111     180 ..     111     181 .. 0.97

  Alignments for each domain:
  == domain 1  score: 58.7 bits;  conditional E-value: 8.4e-20
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrel 69 
                 l+Vg Lp+   e++L+ +Fs+fG i++++l+r+ +tg+sk +af+eFes + A+   e+++++ l gr l
  EPX71744.1 111 LYVGRLPHGFHEKQLEGYFSQFGAINRLRLSRNkKTGNSKHYAFIEFESVDVANIVAETMHNYLLYGRLL 180
                 8****************************************************************99976 PP

>> RL  RL domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.1   7.2e-06     0.032      20      62 ..     115     162 ..      96     171 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 7.2e-06
          RL  20 scpskisekkllkylsqhGkinkhFfYeskgv.....yavvEFsekes 62 
                 ++p+++ ek+l  y+sq+G in++    +k +     ya +EF++ + 
  EPX71744.1 115 RLPHGFHEKQLEGYFSQFGAINRLRLSRNKKTgnskhYAFIEFESVDV 162
                 68999*****************998876665555777******98874 PP

>> RRM_5  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   1.7e-05     0.077      24     110 ..     106     195 ..      87     202 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.7e-05
       RRM_5  24 aegsVllVyglepdkvnldklFnlfclYgnvervkflktkk.....etalvqmgdasaveravqHLnnaklfgkrlevalSKqqavsekepf 110
                 ++ +Vl V  l +  +  ++l   f+++g ++r+++ ++kk      +a+++  +   ++   + + n  l+g+ l+ ++  +++v + e f
  EPX71744.1 106 KQAGVLYVGRLPHG-FHEKQLEGYFSQFGAINRLRLSRNKKtgnskHYAFIEFESVDVANIVAETMHNYLLYGRLLQCKVVPKDKV-HGELF 195
                 45677777777655.556789999*************99963333369*****************************999877775.55555 PP

>> Nup35_RRM_2  Nup53/35/40-type RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       1.2   5.2e+03      26      44 ..      72      89 ..      72      96 .. 0.72
   2 ?   10.2   0.1   0.00013      0.59      19      49 ..     126     163 ..     120     165 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1.2
  Nup35_RRM_2 26 eIvkhyvpkevsvmyvkfe 44
                 eI++ ++p ++++m +  e
   EPX71744.1 72 EIDNSNIP-SKPIMALGNE 89
                 79999999.6888877644 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00013
  Nup35_RRM_2  19 e.hFasfGeIvkhyvp......kevsvmyvkfesekda 49 
                  e +F +fG I++   +      +++++++++fes + a
   EPX71744.1 126 EgYFSQFGAINRLRLSrnkktgNSKHYAFIEFESVDVA 163
                  459*********8777788888***********98766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1447  (0.0807072); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.30s 00:00:00.82 Elapsed: 00:00:00.47
# Mc/sec: 1793.55
//
Query:       EPX71745.1  [L=357]
Description: aspartate semialdehyde dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.4e-44  149.7   0.1    1.7e-43  148.8   0.1    1.5  1  Semialdhyde_dhC  Semialdehyde dehydrogenase, dimerisation dom
    1.8e-33  115.5   0.0    4.2e-33  114.4   0.0    1.6  1  Semialdhyde_dh   Semialdehyde dehydrogenase, NAD binding doma
    3.6e-05   24.5   0.0    0.00094   19.9   0.0    2.5  2  DXP_reductoisom  1-deoxy-D-xylulose 5-phosphate reductoisomer
     0.0042   17.3   0.0      0.011   15.9   0.0    1.7  1  Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding doma
     0.0056   16.8   0.0      0.012   15.8   0.0    1.6  1  DapB_N           Dihydrodipicolinate reductase, N-terminus
  ------ inclusion threshold ------
      0.093   12.8   0.1       0.77    9.8   0.1    2.3  1  Ldh_1_N          lactate/malate dehydrogenase, NAD binding do
       0.12   12.3   0.0       0.23   11.3   0.0    1.5  1  NAD_binding_10   NAD(P)H-binding


Domain annotation for each model (and alignments):
>> Semialdhyde_dhC  Semialdehyde dehydrogenase, dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.8   0.1   6.8e-47   1.7e-43       1     183 [.     160     337 ..     160     338 .. 0.92

  Alignments for each domain:
  == domain 1  score: 148.8 bits;  conditional E-value: 6.8e-47
                      HHHHHHCTT.EEEEEEEEEEEGGGCHHHHHHHHHHHHHHHHHSTTS.CTTTSSHHTTSEESTCSTBTTTTCHCBHHHHHHHHHHHHHCTESC.S CS
  Semialdhyde_dhC   1 LkPLldalgelervivatyqavSGaGkkgvreLlkqvaelqrsdeakpgvfgvpiagNlipyidkeedkgepetreelkavaetkkilefte.k 93 
                      Lk+L da+g++++v+v+++qa+SGaG+                    pgv++++ ++N++pyi +eedk+e+etr++l+ v+e  + +e  +  
       EPX71745.1 160 LKALQDAFGPIDKVSVVSMQAISGAGY--------------------PGVSSLDMLDNVVPYISGEEDKIEWETRKILGSVNENASSFELNNtV 233
                      89*************************....................9********************************************99 PP

                      EEEEEEEESBSSEEEEEEEEEES...SSHHHHHHHHHHHHCS............TTEEEEESS..HCHHSSHHHHTTC..SSSEEEEEEEEETT CS
  Semialdhyde_dhC  94 vsatcvrVPvlrGhseavtiklk...lkdveveeveellaaa............pevkvvvne..eedrPtpaavagg..tnsvsVGRirkdem 168
                      vsa+c+rVPv++Gh++++++k++   ++   v+ev ++l +             p++++vv +   +drP+p++++++  +++vsVGRir+d++
       EPX71745.1 234 VSAQCNRVPVIDGHLMCISVKFAkanPS---VSEVHKALVNYvceaqklechsaPKQAIVVFDesCPDRPQPRLDRENqnGYAVSVGRIRSDSI 324
                      99********************955555...555555555555559********9999988887889*********999999************ PP

                      CTTEEEEEEEEETTT CS
  Semialdhyde_dhC 169 gdeglklvvvgDNll 183
                      +d  +k+v++ +N++
       EPX71745.1 325 FD--VKFVSLVHNTV 337
                      **..*********97 PP

>> Semialdhyde_dh  Semialdehyde dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.4   0.0   1.6e-36   4.2e-33       1     119 [.       5     129 ..       5     131 .. 0.99

  Alignments for each domain:
  == domain 1  score: 114.4 bits;  conditional E-value: 1.6e-36
                     EEEEETTTSHHHHHHHHHHHCTSSEEEEEEEESTTTTTSBHHHHSG......GGTTTECEBEEEGGGGGCTT-SEEEE-SCHHHHHHHHHHHHHT CS
  Semialdhyde_dh   1 kvaivGatGyvGqellrlLeehpevelvvllsssrsaGkklaeavk......aleegkdlkvedvdeeelkevdivflalpagvskelapklaea 89 
                     kv+++GatG vGq++l+lL++hp++e+++l +s+rsaGk+++ea k      ++++++d+ v+++d++e+ ++divf+ l+++++ e+++++++a
      EPX71745.1   5 KVGVLGATGTVGQRFLTLLADHPNFEIAALGASARSAGKAYKEATKwkqsapMPKKVADMIVKPCDAKEFTHCDIVFSGLDSDYAGEIEKNFRDA 99 
                     7********************************************************************************************** PP

                     TSEEEESSSTTTTSTTSEBE-HHHHGGGGG CS
  Semialdhyde_dh  90 gvkviDlssdfRlkddavyvlpevnreaik 119
                     ++ v ++++++R  +++++v+p vn ++++
      EPX71745.1 100 NIAVLSNAKNYRRTPNVPLVVPTVNTDHLD 129
                     **************************9986 PP

>> DXP_reductoisom  1-deoxy-D-xylulose 5-phosphate reductoisomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   3.7e-07   0.00094       1      48 [.       6      53 ..       6      80 .. 0.87
   2 ?    1.9   0.0      0.13   3.4e+02      40     104 ..     278     343 ..     252     356 .. 0.72

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 3.7e-07
                     EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEE.SSTHHHHHHHHHHHT- CS
  DXP_reductoisom  1 vviLGsTGSIGtqtLdvieenpdkfevvalaa.gsnvellaeqakefkp 48
                     v +LG+TG +G+  L +++++p +fe++al a  ++  ++++ a+++k 
       EPX71745.1  6 VGVLGATGTVGQRFLTLLADHP-NFEIAALGAsARSAGKAYKEATKWKQ 53
                     579*******************.9******9977788888888888764 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.13
                      HHHHHHHT-SEEEESSHHHHHHHHHHHHH.TTSSSEEEESHHHHHHHHCHTT-SEEEE--SSGGGH CS
  DXP_reductoisom  40 aeqakefkpklvavadeeaaeelkealke.kelktevlvGeealkelaeeeeadvvvaaivGaaGL 104
                      +  +++   + ++v de+  ++ + +l++ ++    v vG+    ++   + + +v + + GaaG 
       EPX71745.1 278 KLECHSAPKQAIVVFDESCPDRPQPRLDReNQNGYAVSVGRIRSDSIFDVKFVSLVHNTVLGAAGA 343
                      4445555667788889988888888887734557899999999999999999**********9873 PP

>> Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   4.5e-06     0.011       1      47 [.       6      49 ..       6      81 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 4.5e-06
                     EEEE--.SHHHHHHHHHHHCTCCT-GEEEEEESSHHHHHHHHCHHTTT CS
  Sacchrp_dh_NADP  1 vliiGa.GsvGqavaellarhfdvdaeitvadrskeklealaakalgv 47
                     v ++Ga G vGq ++ lla+h ++  ei+  + s +++ ++ ++a  +
       EPX71745.1  6 VGVLGAtGTVGQRFLTLLADHPNF--EIAALGASARSAGKAYKEA--T 49
                     679*********************..9****99999987776654..3 PP

>> DapB_N  Dihydrodipicolinate reductase, N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   4.5e-06     0.012       2      66 ..       5      66 ..       4      89 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 4.5e-06
                EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTCSTTTTTBHHHHSSSS--S-BEBSSHHHHHH CS
      DapB_N  2 kvavvGasGrmGkevvkaveeaedlelvaavdrkeselegkdagellglgklgvavtddleevle 66
                kv+v+Ga+G++G++ + ++ +++++e++a   + +s   gk   e+++  k++ ++ +++++++ 
  EPX71745.1  5 KVGVLGATGTVGQRFLTLLADHPNFEIAALGASARS--AGKAYKEATKW-KQSAPMPKKVADMIV 66
                8**************************998887773..44444443333.444555555555554 PP

>> Ldh_1_N  lactate/malate dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.1    0.0003      0.77       2      25 ..       5      29 ..       4     113 .. 0.73

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.0003
                EEEEETTTSHHHHHHHHHHHHT.TS CS
     Ldh_1_N  2 kvavvGaaGgiGqslalllank.kl 25
                kv v+Ga+G++Gq +++lla + ++
  EPX71745.1  5 KVGVLGATGTVGQRFLTLLADHpNF 29
                99****************9988443 PP

>> NAD_binding_10  NAD(P)H-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   8.9e-05      0.23       1      71 [.      10      87 ..      10     116 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 8.9e-05
                    TTTSHHHHHHHHHHHHC-T-EEEEEETTHHHCHHHHCTTTCEEEE--TT-CCHHHHHHT.........T-SEEEES---T CS
  NAD_binding_10  1 GAtGkvGrllvkellargghevtalvRnpeklaeleaeeglevvegdvtdvedlaealk.........gadaVvsalggg 71
                    GAtG vG++ ++ l+++ ++e+ al  ++ ++ +    ++++  + ++  ++++a+ +          ++d+V+s l ++
      EPX71745.1 10 GATGTVGQRFLTLLADHPNFEIAALGASARSAGKA--YKEATKWKQSAPMPKKVADMIVkpcdakeftHCDIVFSGLDSD 87
                    9**********9998888******98888877643..2455555555555777776665555566666888888888333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (357 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       374  (0.0208601); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 2312.95
//
Query:       EPX71746.1  [L=698]
Description: SPX/EXS domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      6e-82  275.6  38.7      8e-82  275.2  38.7    1.2  1  EXS       EXS family
    5.3e-31  108.9  23.9      2e-15   57.6   5.0    3.4  4  SPX       SPX domain
  ------ inclusion threshold ------
      0.051   14.0   1.3       0.21   12.0   0.0    2.6  3  FRB_dom   FKBP12-rapamycin binding domain


Domain annotation for each model (and alignments):
>> EXS  EXS family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  275.2  38.7   1.3e-85     8e-82       2     330 ..     308     631 ..     307     632 .. 0.96

  Alignments for each domain:
  == domain 1  score: 275.2 bits;  conditional E-value: 1.3e-85
         EXS   2 plpyrvlllvvlglllwalnlhvlsklginyalifeldprsslsyrqlyelaalllllllllllllllsaevdalellplllllllllllllplnilyr 100
                 ++++ ++ll++l+++l+ ln+++++k+++ny life+++r++l++rq +e+ +l++++++l+++l+++++    ++++p+l+l ++ ++ ++p  ++y+
  EPX71746.1 308 LQIWGGFLLLILVFVLFSLNCYYWEKTRVNYILIFEFNQRETLNWRQHMEIYSLMFFIFSLFFWLCMRDFFPGFTNFFPALFLGVAGVICIFPRFFPYW 406
                 789*****************************************************************999999*******************8889** PP

         EXS 101 ssrrrflrtllrillaplapvefadfllaDiltSlakvlgDlaltvclyasswseedrkcgss.svvvplllslPyliRfrQclreyrdtkkr.phllN 197
                 ++r++f+  l+r++l++l++v+f+df++aD+++Sl +v g++al++c+y+ +w++ +  c+ss s ++ +++++P+++R++Qc+r++ d+ +  phl+N
  EPX71746.1 407 RTRKYFIFQLIRVFLSGLSSVHFQDFFFADQMVSLIYVAGNVALFFCIYSRHWNQ-PHLCNSSnSPLLGFFTAFPAILRIFQCFRRFADSLQMfPHLVN 504
                 **************************************************99999.999*888466666********************99999***** PP

         EXS 198 alKYatafpvivlsalqrlsksdesestlrvlwllaalvnslysfiWDvtmDWgLlkllksknwflRdellypkkwvYylaivldlvlRftWslklssh 296
                 alKY++++   +l +l+r +       ++r+++ ++a +n+l+s++WD+tmDW+L+   k+++w +R+++l++++w Y la+++++v+R++ +++ +++
  EPX71746.1 505 ALKYMFTVTTQMLLSLYRRKVGL----RYRICYTIFAGINALFSYTWDITMDWSLF-IRKDSHWEFRKHRLLRSTWPYILAMIFNFVIRISFIFYSIFP 598
                 ******************99999....9****************************.445568**********************************99 PP

         EXS 297 lhsiqeselgvfllellEvlRRwvWvffRvEnEh 330
                  ++iq+s+ ++f+++l E++RR++W+++RvEnE 
  EPX71746.1 599 -NHIQHSSGISFFITLSELFRRCLWNVLRVENEE 631
                 .99*****************************96 PP

>> SPX  SPX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.8   0.4   3.5e-13   2.1e-09       1      43 [.       1      42 [.       1      62 [. 0.79
   2 !   26.9   2.6   7.4e-10   4.5e-06     151     236 ..      44     124 ..      34     147 .. 0.74
   3 !   57.6   5.0   3.3e-19     2e-15     325     382 ..     167     224 ..     152     226 .. 0.91
   4 ?   -4.1   0.1       1.9   1.1e+04     324     341 ..     633     649 ..     625     650 .. 0.78

  Alignments for each domain:
  == domain 1  score: 37.8 bits;  conditional E-value: 3.5e-13
         SPX  1 MKFakeLeenlvpEWrdaYldYkqLKKlIkkvqreleslglea 43
                MKF+k  e +lv+EW + Y dYk++KK I ++q+    +gl++
  EPX71746.1  1 MKFGKVIEGELVEEWASTYFDYKKGKKIIGAIQKNPG-EGLPK 42
                *********************************9332.34433 PP

  == domain 2  score: 26.9 bits;  conditional E-value: 7.4e-10
         SPX 151 ssspsllrrlfsesesreeksersyetrplr......aekeFferLdseLnkvetFykakeeefterlesLrkqlealrprrikeaeerksd 236
                 ss+ s+l+         + ++++ ye+ ++r          F e+Ld++L k+ +Fy++  +e+ erl+++ +q+++    + ke +++k+d
  EPX71746.1  44 SSEASFLS---------SANNTSYYEKAIQRlavdfrFHPIFQEFLDQQLAKIQSFYEKLTNEAGERLDMIYDQIHIYE--KLKEDKKEKED 124
                 33444444.........44777777876666777777999**************************************4..44433444333 PP

  == domain 3  score: 57.6 bits;  conditional E-value: 3.3e-19
         SPX 325 nrvklkkakkklkkafvelYrgLelLKsYqeLNrtAFrKIlKKfDKvtaltaskrymk 382
                  +v+++k k klk  ++e+Y +L l+ +Yq+LN+ AFrKI KK+DK+ +++++ r mk
  EPX71746.1 167 PDVSYRKLKSKLKMVMLEFYDYLKLILQYQSLNEQAFRKIVKKYDKIFHTNLQTRWMK 224
                 48***************************************************99997 PP

  == domain 4  score: -4.1 bits;  conditional E-value: 1.9
         SPX 324 enrvklkkakkklkkafv 341
                 +nr++l++a++ lk  fv
  EPX71746.1 633 YNRENLRAARE-LKINFV 649
                 5799******9.998887 PP

>> FRB_dom  FKBP12-rapamycin binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.3      0.53   3.2e+03      56      97 ..      72     115 ..      48     119 .. 0.59
   2 ?   -2.8   0.1       1.4   8.5e+03      50      90 ..     197     210 ..     178     227 .. 0.57
   3 ?   12.0   0.0   3.4e-05      0.21       9      88 ..     236     312 ..     232     317 .. 0.92

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.53
     FRB_dom  56 FaqafgreLkeaeewlkkykkteneed...lnqawdiyyevfrri 97 
                 F+  f++ L +  + ++++ ++ ++e    l++++d   ++++++
  EPX71746.1  72 FHPIFQEFLDQQLAKIQSFYEKLTNEAgerLDMIYDQI-HIYEKL 115
                 55556666655555555554433333311155555442.455555 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.4
     FRB_dom  50 tlreasFaqafgreLkeaeewlkkykkteneedlnqawdiy 90 
                 +l+e++F                            ++ + y
  EPX71746.1 197 SLNEQAFR---------------------------KIVKKY 210
                 34444443...........................222333 PP

  == domain 3  score: 12.0 bits;  conditional E-value: 3.4e-05
     FRB_dom   9 whElwhegLeeAsrlyfgeknveamlklleplhellekgpetlreasFaqafgreLkeaeewlkkykkteneedlnqawd 88 
                  +++w + +e+  + +f++ + +  l++l++l ++ +    +++   F   +g  +  a e ++ y+ +e+++ l q+w 
  EPX71746.1 236 TTDQWQTRIEDTFADVFTKGDRKLALEQLRSLRQKQDY---SFNTMRFGLLYGAGIPLALEGICYYNGDEQHRYLLQIWG 312
                 679*********************99999999998888...778888********************************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (698 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       955  (0.0532657); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.82u 0.35s 00:00:01.17 Elapsed: 00:00:00.55
# Mc/sec: 3806.37
//
Query:       EPX71747.1  [L=643]
Description: NAK protein kinase Ppk38 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.4e-32  112.4   0.0    3.6e-32  111.8   0.0    1.2  1  Pkinase      Protein kinase domain
    4.7e-23   81.8   0.0    6.5e-23   81.3   0.0    1.2  1  Pkinase_Tyr  Protein tyrosine kinase
  ------ inclusion threshold ------
      0.024   14.0   0.0      0.042   13.2   0.0    1.4  1  Kinase-like  Kinase-like
      0.083   13.0   0.1       0.31   11.1   0.0    2.0  2  SRP1_TIP1    Seripauperin and TIP1 family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.8   0.0   8.1e-36   3.6e-32       4     260 ..      36     301 ..      33     304 .. 0.84

  Alignments for each domain:
  == domain 1  score: 111.8 bits;  conditional E-value: 8.1e-36
                 EEEEEEESSEEEEEEEETTTT...EEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS.CTTB--EEE..EEEE...SSEEEEEEE--TTEBHHHHHH..H CS
     Pkinase   4 leklGeGsfGkVykaveketg...kivAvKkikkekakkkkekkvlrEikilkklk.hpnivrlye..vfee...kdelylvleyveggeladlle..r 91 
                 ++ + eG+f+ Vy ++ ++ g    + ++K+i   +a   k  +v +E++ +k ++  ++ v +y+  +f+    + e +++ley++gg l d+++   
  EPX71747.1  36 VRYIAEGGFSHVYLVKVRAPGvapYEAVLKRIFAVDALALK--AVYEEVNTMKLVSnDKRCVSYYGseFFSAgksQFESLVLLEYCSGGGLIDFMNsrL 132
                 677889********998876622256888999999888866..5**********99899999999622565554445556899************9644 PP

                 HSS--HHHHHHHHHHHHHHHHHHHHTT..EE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS..........BCTTTSCGGGS-HHHH...TTSCBS CS
     Pkinase  92 kgslseeeakkiakqilegleylHskg..iiHrDlKpeNiLidekgelKitDFGlakelesssk..........ltsfvgtseYlAPEvl...keneys 175
                 +  lse+e+ kia+++ e+++ +H  +  +iHrDlK eN+L+   +  K++DFG a++   s k            +   t +Y+ PE+l   ++ +++
  EPX71747.1 133 QIRLSESEILKIASHVTEAVASMHYLRppLIHRDLKIENVLLAAPNFYKLCDFGSACHPIPSPKtpaeiqqveyNIEKYTTWQYRCPEMLdlrRGFGID 231
                 4559********************77667**************9999***********99988889****9996556677888*******99888999* PP

                 HHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHT CS
     Pkinase 176 kkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellq 260
                 +k+D+W+lG+++y+l + ++pf+++                l il +++  +p   + s+ +k+l++ ll+ +p +R+ + + l+
  EPX71747.1 232 EKSDIWALGILFYKLCYYTTPFEQQGP--------------LAIL-NVNYMFPPLPSYSSRLKRLISALLQPNPWQRPNIYQTLA 301
                 ***********************2222..............2233.247899**************************9988775 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.3   0.0   1.4e-26   6.5e-23       3     255 ..      35     299 ..      33     303 .. 0.81

  Alignments for each domain:
  == domain 1  score: 81.3 bits;  conditional E-value: 1.4e-26
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS.-BTTB--EEEEEE.....SSSSEEEEEE--TTEBHHHHHHH CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkkl.khpnivkllgvct.....keepllivteyvkgGdLlkfLrk 94 
                  + + ++eG f++V+  +++     + ++ ++K +    ++   ++++ee+++mk + + ++ v+++g        ++ + l+++ey++gG L +f+++
   EPX71747.1  35 VVRYIAEGGFSHVYLVKVR-APGVAPYEAVLKRIF-AVDALALKAVYEEVNTMKLVsNDKRCVSYYGSEFfsagkSQFESLVLLEYCSGGGLIDFMNS 130
                  567899*************.888889999999994.5566669*************999********8777654333349999*************** PP

                  TCTTTSBHHHHHHHHHHHHHH...HHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEE.......EETTSSTSGGGGS-HHHHHHSE. CS
  Pkinase_Tyr  95 kekekltlkdllsfalqvAkG...meyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddey.......vkkeeaklpvkWmapEslkekk. 181
                  + + +l+ +++l++a +v ++   m+yL    l+Hrdl   NvLl+  ++ k++DfG a +   + ++       + + e+ +  ++  pE+l+ ++ 
   EPX71747.1 131 RLQIRLSESEILKIASHVTEAvasMHYLR-PPLIHRDLKIENVLLAAPNFYKLCDFGSACHPIPSPKTpaeiqqvEYNIEKYTTWQYRCPEMLDLRRg 227
                  *9**************9998733366664.57*************************8865433333222222113334455677788******9999 PP

                  ..EEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHH CS
  Pkinase_Tyr 182 ..ftsksDvWsfGvllwEiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfsel 255
                    + +ksD+W+ G+l + ++    +p+++  +   l+ l+ ++  +   + +++l++l++  ++ +p +Rp++ + 
   EPX71747.1 228 fgIDEKSDIWALGILFYKLCY-YTTPFEQQGP---LAILNVNYMFPPLPSYSSRLKRLISALLQPNPWQRPNIYQT 299
                  999****************99.4678866555...5567789999999999********************98775 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   9.4e-06     0.042     230     286 ..     233     291 ..     147     293 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 9.4e-06
  Kinase-like 230 kldaWqlGlviyriwclklPltlateeak..eewkfklckkipekvkaLlkkfLqlsqe 286
                  k d W+lG+  y +   + P++++ ++a+   ++ f +    +  +k+L+  +Lq++  
   EPX71747.1 233 KSDIWALGILFYKLCYYTTPFEQQGPLAIlnVNYMFPPLPSYSSRLKRLISALLQPNPW 291
                  579*********************9998611568999999***************9865 PP

>> SRP1_TIP1  Seripauperin and TIP1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   6.9e-05      0.31      60      95 ..     249     287 ..     237     290 .. 0.81
   2 ?   -3.9   0.0       3.4   1.5e+04      27      38 ..     330     341 ..     326     348 .. 0.63

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 6.9e-05
   SRP1_TIP1  60 Yttlls...eidfaevssmitglPWYssRLepaiesala 95 
                 Ytt ++    + + +v++m+  lP YssRL+  i++ l+
  EPX71747.1 249 YTTPFEqqgPLAILNVNYMFPPLPSYSSRLKRLISALLQ 287
                 8888883333566899******************99886 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 3.4
   SRP1_TIP1  27 keYlslakansg 38 
                 +eYl++++++++
  EPX71747.1 330 SEYLQMISNTQS 341
                 678888877433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (643 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       525  (0.0292822); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.64u 0.35s 00:00:00.99 Elapsed: 00:00:00.51
# Mc/sec: 3800.72
//
Query:       EPX71748.1  [L=412]
Description: arrestin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.1e-09   35.9   1.1    2.2e-08   34.6   0.8    1.7  2  Arrestin_C  Arrestin (or S-antigen), C-terminal domain


Domain annotation for each model (and alignments):
>> Arrestin_C  Arrestin (or S-antigen), C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0      0.52   9.4e+03      84     116 ..     211     242 ..     200     250 .. 0.67
   2 !   34.6   0.8   1.2e-12   2.2e-08       4      94 ..     288     389 ..     286     406 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 0.52
                 EE.----B-----S---EEEEEEEEEEEEEEES CS
  Arrestin_C  84 elqiPeeltpssarnvelikvsYklkvkltlsg 116
                  + +P +l p +  +++ ++ sY +  ++  s+
  EPX71748.1 211 AFVVPLDLGPGTL-KTQKMQFSYSFSATVFYSS 242
                 5567777777443.7888888888887777775 PP

  == domain 2  score: 34.6 bits;  conditional E-value: 1.2e-12
                 -EEEEEEES-SEEETT--EEEEEEEEE-SSSEEEEEEEEEEEEEEEESS..........SEEEEEEEEEEEEE---..B-TTEE.EEEEEEE.----B- CS
  Arrestin_C   4 kvsleaslpkkgyvpGetipvtvkidndskkkvkkikvslvqhvdvcafnr........snkkeknvvaksdsvkv..tsaakdkletevelqiPeelt 92 
                 k+ l++s++++ +  Ge +++++++  +s+ +v++i v l+++++   +n+         +k +++vv+k +  ++    +++++ ++ v+l +P++  
  EPX71748.1 288 KLLLRISISRSLFLSGEHVKLSIHYCCKSQSTVRSIIVYLIEYTQLLKNNSrlyqtlkrPSKTTEKVVSKCKLTQIasHHNSSQPGHLHVSLGLPQSCR 386
                 6789*********************************************99*******98999999999999999988666677777779999994444 PP

                 -.- CS
  Arrestin_C  93 p.s 94 
                 +  
  EPX71748.1 387 SiE 389
                 331 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (412 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       620  (0.0345808); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.23s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 2731.16
//
Query:       EPX71749.1  [L=436]
Description: membrane associated protein Pal1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.3e-27   95.0   8.9    4.2e-26   92.3   3.8    3.4  2  Pal1      Pal1 cell morphology protein


Domain annotation for each model (and alignments):
>> Pal1  Pal1 cell morphology protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.2     0.036   6.4e+02      29      55 ..      10      36 ..       6      95 .. 0.78
   2 !   92.3   3.8   2.3e-30   4.2e-26       1     136 [.     172     292 ..     172     294 .. 0.71

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.036
        Pal1 29 rNknskaaPvlAfpkdgannslggagk 55
                rN n  ++P    p+d+ n+    +++
  EPX71749.1 10 RNANVGQSPAEEAPADSSNMETYNSKN 36
                9999999************98766544 PP

  == domain 2  score: 92.3 bits;  conditional E-value: 2.3e-30
        Pal1   1 DtiDkLDvtglf.gglfHHdGPfDAvtphrNknskaaPvlAfpkdgannslggagklnkksaldevfGredeeddkdlaklsakakkkessetkaakks 98 
                 D+iD+LDvtg++ +g+fHHdGPfDA++phrN+n+k+aPv+Afpkd+  ns+ + g++ ++++  + f r+  +d+                 tka+ +s
  EPX71749.1 172 DQIDRLDVTGIYgSGSFHHDGPFDACRPHRNRNAKKAPVAAFPKDSIANSIPKIGNNFHDPSAPKDFSRKAIHDNLR---------------TKAVLQS 255
                 89**********999**************************************999998888887777742222222...............2233333 PP

        Pal1  99 skevtafdsktkaelvhGeeta..GLGssTFldGapasra 136
                   +++++d +   ++v G +t   GL  sT ++Ga as++
  EPX71749.1 256 PFSSMTYDEE---NPVPGGNTDapGLTDSTRIEGALASKS 292
                 3444444443...345554442226666666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (436 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       347  (0.0193541); expected 358.6 (0.02)
Passed bias filter:                      186  (0.0103743); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.45
# Mc/sec: 2881.57
//
Query:       EPX71750.1  [L=471]
Description: acyl-coA-sterol acyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.4e-34  117.8  29.9    1.5e-33  116.6  30.2    1.5  1  MBOAT     MBOAT, membrane-bound O-acyltransferase family
     0.0021   18.3   2.9     0.0021   18.3   2.9    3.4  5  MBOAT_2   Membrane bound O-acyl transferase family
  ------ inclusion threshold ------
       0.18   11.9   6.0       0.61   10.2   0.4    3.4  2  NS3_envE  Non-structural protein NS3/Small envelope protein E


Domain annotation for each model (and alignments):
>> MBOAT  MBOAT, membrane-bound O-acyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.6  30.2   2.5e-37   1.5e-33      54     347 ..     145     469 ..      60     470 .. 0.82

  Alignments for each domain:
  == domain 1  score: 116.6 bits;  conditional E-value: 2.5e-37
       MBOAT  54 lllisyfvvgflel.klhslslvfrklasaallsklpslleylgYvffyp.............................................lllv 106
                 ++ ++++++ +++l + +++ ++f  l+s   l+k++s+ +++g  +++                                              ++l+
  EPX71750.1 145 IFAFLMHSILRCCLsDWSWTHRSFFILHSILILMKTHSYNTVNGWFSYCYhqvqglrtrsislsehdkrnyklfeesiyehgkrypanltftnalTFLF 243
                 445666777777778999999999999999999999999999997777777999999999999999999999999999999999999**9*99**9*** PP

       MBOAT 107 GPilsyseymsfvesplsrllytakrnfavalyalflgltylilieyvlskicakdftifkmlssaqllmrsvimrilllllllfllifdflglwlval 205
                  P+l+y+  ++ +++p++r +y     ++ al+ + +    l l+ ++++ ++   + +   ++   + + s  +++l+l  + ++l+f f+   ++ +
  EPX71750.1 244 MPTLCYQ--LYVPRTPQIRFTYL----LECALGTFGC----LFLLVIISENYMIPILLRAIKWILEAPEEASTYFFVLQLGKTVTYLMFPFML-SFLLV 331
                 *******..899********995....7777777766....3344444455555555555555555555555555555555555555554443.33444 PP

       MBOAT 206 gedilsGlgvng.arldrvadrniygdwenavsfsefwraWNipvhkWLlryvYkplgskkfklnkslatlatFlfsAvwHglalgyliwfvlrvllll 303
                  + i  G+  n  a+ +r+adrn+y+dw+n+++f++f r+WN pvh++L+r+vY p+       +k+ +t++tF++s+v H+l +  +i+++ r++ l+
  EPX71750.1 332 FWVIFEGIC-NFsAEITRFADRNFYDDWWNCWTFDQFARTWNKPVHYFLFRHVYSPFN---NIFSKLTSTTLTFFVSSVLHELVM-ACITKKIRGYGLF 425
                 488888865.4469*******************************************5...45899*******************.************* PP

       MBOAT 304 veklimrlvalsnlkfdrrrailsnvifwlgaflgpslalllyl 347
                 +++ + + +  ++ kf r++++l+nv+fw+++ +g+ l+ +ly+
  EPX71750.1 426 FQMTQVPYILIQRQKFIRKHRLLGNVFFWVSILIGITLIGVLYI 469
                 ****************************************9997 PP

>> MBOAT_2  Membrane bound O-acyl transferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.9   1.1e+04      45      59 ..      56      70 ..      43      89 .. 0.69
   2 ?   -1.9   0.8      0.71   4.2e+03      49      72 ..     141     160 ..     113     171 .. 0.47
   3 ?    0.1   0.0      0.17     1e+03      12      25 ..     184     197 ..     176     216 .. 0.82
   4 ?   -3.2   0.1       1.7     1e+04      70      83 .]     298     311 ..     292     329 .. 0.55
   5 !   18.3   2.9   3.6e-07    0.0021      16      81 ..     357     426 ..     350     428 .. 0.72

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.9
     MBOAT_2 45 klarylqllvaFllS 59
                +   ++  +v F +S
  EPX71750.1 56 NNVDFTGFFVLFWVS 70
                345667777777777 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.71
     MBOAT_2  49 ylqllvaFllSGllHaagdytqla 72 
                 y+  ++aF    l+H ++ +  + 
  EPX71750.1 141 YTVSIFAF----LMHSILRCCLSD 160
                 22223333....566666665555 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.17
     MBOAT_2  12 yslrrfWgrfWHql 25 
                  +++++ + ++Hq+
  EPX71750.1 184 NTVNGWFSYCYHQV 197
                 5999*********8 PP

  == domain 4  score: -3.2 bits;  conditional E-value: 1.7
     MBOAT_2  70 qlapestallfFll 83 
                   ape+ ++ fF+l
  EPX71750.1 298 LEAPEEASTYFFVL 311
                 44444445555543 PP

  == domain 5  score: 18.3 bits;  conditional E-value: 3.6e-07
     MBOAT_2  16 rfWgrf.WHqlfrrglkstakkilrlllg...sklarylqllvaFllSGllHaagdytqlapestallfF 81 
                 ++W+ + + q+ r + k + ++++r++ +   + +++++ ++++F++S +lH+++   + ++ ++  lfF
  EPX71750.1 357 DWWNCWtFDQFARTWNKPVHYFLFRHVYSpfnNIFSKLTSTTLTFFVSSVLHELVMACITKKIRGYGLFF 426
                 4555442456666667777777777777766433889*****************9999888666677777 PP

>> NS3_envE  Non-structural protein NS3/Small envelope protein E
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.7     0.033   1.9e+02      15      27 ..      65      77 ..      59      83 .. 0.88
   2 ?   10.2   0.4    0.0001      0.61       5      31 ..     441     467 ..     439     470 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.033
    NS3_envE 15 vlfilvvlivvll 27
                vlf++ v i++l+
  EPX71750.1 65 VLFWVSVAIMILI 77
                89*******9987 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.0001
    NS3_envE   5 lvDdhalvvqvlfilvvlivvllivia 31 
                 ++ +h l ++v+f++ +li ++li + 
  EPX71750.1 441 FIRKHRLLGNVFFWVSILIGITLIGVL 467
                 577899*****************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (471 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       761  (0.0424452); expected 358.6 (0.02)
Passed bias filter:                      312  (0.017402); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.28s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 3182.78
//
Query:       EPX71751.1  [L=635]
Description: rRNA processing protein Enp2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.3e-10   38.7   3.5    1.2e-09   37.8   3.5    1.5  1  NUC153       NUC153 domain
    0.00011   22.4   0.0      0.022   15.1   0.0    2.6  2  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
     0.0043   17.9   0.1         22    6.1   0.0    4.5  4  WD40         WD domain, G-beta repeat
  ------ inclusion threshold ------
        2.6    7.9   3.8         31    4.5   0.0    2.4  2  Tmemb_9      TMEM9


Domain annotation for each model (and alignments):
>> NUC153  NUC153 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.8   3.5   2.7e-13   1.2e-09       1      28 [.     491     518 ..     491     519 .. 0.98

  Alignments for each domain:
  == domain 1  score: 37.8 bits;  conditional E-value: 2.7e-13
      NUC153   1 DpRFkalFedhdFaIDptspeFkktnpm 28 
                 D+RFk+ F+++dF++D+++ eFk++np+
  EPX71751.1 491 DDRFKNAFTNKDFEVDEDTIEFKQLNPT 518
                 9**************************6 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.6   0.0    0.0091        41      27      68 ..     173     214 ..     146     228 .. 0.79
   2 !   15.1   0.0   4.9e-06     0.022      36      90 ..     235     289 ..     226     291 .. 0.91

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.0091
  ANAPC4_WD40  27 qrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldae 68 
                   ++ ++++d++   v+ L  +p  +lLa++++ g+v++ d  
   EPX71751.1 173 FKIESAASDEPTAGVNVLDINPVHQLLAFGTDAGTVEFWDPR 214
                  45555588999999**********************998865 PP

  == domain 2  score: 15.1 bits;  conditional E-value: 4.9e-06
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  + ++ v++L++++dg  La + sdg   l+d  s +   + + + +  v+ l+W 
   EPX71751.1 235 SANRAVTALSFRNDGLNLAAGLSDGVSLLYDLRSSNPYMTKDQGYSLPVKNLNWL 289
                  56789*******************************9999999999999999996 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0     0.079   3.5e+02      16      38 .]      59      82 ..      54      82 .. 0.80
   2 ?    2.2   0.0     0.088   3.9e+02      13      38 .]     187     212 ..     176     212 .. 0.82
   3 !    6.1   0.0    0.0049        22      12      38 .]     238     265 ..     227     265 .. 0.78
   4 ?    0.6   0.1      0.28   1.3e+03      25      37 ..     299     310 ..     281     311 .. 0.72

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.079
                EEEETTSSEEE.EEETTSEEEEEE CS
        WD40 16 lafspdgawla.sGsdDgtvriWd 38
                +++ +dg++ + +G ++++++++d
  EPX71751.1 59 IKVTRDGKYAMsTGVYKPHIKVFD 82
                67789999*6526767******98 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.088
                 EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  13 vtslafspdgawlasGsdDgtvriWd 38 
                 v+ l+ +p +++la G+d gtv +Wd
  EPX71751.1 187 VNVLDINPVHQLLAFGTDAGTVEFWD 212
                 555666777888998999*******9 PP

  == domain 3  score: 6.1 bits;  conditional E-value: 0.0049
                 S.EEEEEEETTSSEEEEE.ETTSEEEEEE CS
        WD40  12 s.vtslafspdgawlasG.sdDgtvriWd 38 
                   vt+l+f  dg  la+G s Dg   ++d
  EPX71751.1 238 RaVTALSFRNDGLNLAAGlS-DGVSLLYD 265
                 35****************88.*9877766 PP

  == domain 4  score: 0.6 bits;  conditional E-value: 0.28
                 EEEEETTSEEEEE CS
        WD40  25 lasGsdDgtvriW 37 
                 ++s++  + ++iW
  EPX71751.1 299 VLSAD-SKIIKIW 310
                 56666.9****** PP

>> Tmemb_9  TMEM9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0    0.0068        31      63     133 ..     406     482 ..     401     492 .. 0.66
   2 ?    2.2   2.3     0.033   1.5e+02      87     134 ..     527     582 ..     515     586 .. 0.67

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.0068
     Tmemb_9  63 lLviYmlflllldpllnkr...kkkasyqehtnee..detseslssasqslelrar.snvlnrvehqqdkWkrqvke 133
                 ++ +Ym  + + + l +k    ++  sy+eh ++   ++ +++ ss+ + +++++  +++  r+ hq  k +++v +
  EPX71751.1 406 VIRAYMHGFFIDSRLYEKArliANPFSYEEHRKKAvkERLEKKRSSKIRAQNRPKVnATLAARLAHQEAKLRKKVGD 482
                 56679998888888888875665667788888777432222222222222333333377789***********9965 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.033
     Tmemb_9  87 yqehtnee........detseslssasqslelrarsnvlnrvehqqdkWkrqvkeQ 134
                   e+++ee         +++e++ss ++ +e ++  n+l++ + +qd+ k++  eQ
  EPX71751.1 527 AAEESDEEreqtrgvqFSSDEDISSDEEVEEHETFDNLLSKRQTEQDNKKKKGAEQ 582
                 444455553334444455556666655556666669**************999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (635 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1264  (0.0705003); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.72u 0.37s 00:00:01.08 Elapsed: 00:00:00.54
# Mc/sec: 3527.56
//
Query:       EPX71752.1  [L=369]
Description: P-TEFb-cap methyltransferase Pcm1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   2.1e-103  346.0   0.0   2.9e-103  345.5   0.0    1.1  1  Pox_MCEL         mRNA capping enzyme
    4.4e-16   59.4   0.0    8.2e-16   58.5   0.0    1.5  1  Methyltransf_25  Methyltransferase domain
    4.3e-10   40.1   0.0      7e-10   39.4   0.0    1.4  1  Methyltransf_11  Methyltransferase domain
    4.8e-10   40.1   0.0    9.9e-10   39.1   0.0    1.6  1  Methyltransf_12  Methyltransferase domain
    9.9e-10   38.4   0.0    1.5e-09   37.8   0.0    1.3  1  Methyltransf_31  Methyltransferase domain
    5.3e-08   32.9   0.0    8.5e-08   32.2   0.0    1.3  1  Methyltransf_23  Methyltransferase domain
  ------ inclusion threshold ------
      0.027   14.0   0.0      0.063   12.7   0.0    1.6  1  Methyltransf_4   Putative methyltransferase
      0.067   12.7   0.0       0.12   11.9   0.0    1.3  1  VRP3             Salmonella virulence-associated 28kDa protei
       0.18   11.8   0.0       0.39   10.7   0.0    1.7  1  Methyltransf_32  Methyltransferase domain
       0.19   10.9   0.0       0.42    9.7   0.0    1.5  1  NNMT_PNMT_TEMT   NNMT/PNMT/TEMT family


Domain annotation for each model (and alignments):
>> Pox_MCEL  mRNA capping enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  345.5   0.0  1.6e-106  2.9e-103       6     333 .]      66     367 ..      62     367 .. 0.96

  Alignments for each domain:
  == domain 1  score: 345.5 bits;  conditional E-value: 1.6e-106
    Pox_MCEL   6 tesevtdlvathynerpetgellkkRiastiiylrnlnNyiKslLiseyasktkldesnklkvLdldcgkGgDLeKyekgeIsklvatDiaeesieeck 104
                 ++++v d+v+thyn+rp+ g   kkR+ s+ii+l+++nN+iKs+Li++++ k+++   + l vLdl+cgkGgDL+K++k++I+ ++++Diae+s++++k
  EPX71752.1  66 SNRDVRDVVRTHYNARPDMG--TKKRQFSPIIQLKRFNNWIKSVLIQKFTPKVDD---KPLLVLDLGCGKGGDLIKWDKAGIEGYIGIDIAENSVDQAK 159
                 6899****************..9*******************************9...99*************************************** PP

    Pox_MCEL 105 eRYnklrsekkskyykFdaelirsdsfvssvrevfedyelkfdivslQFaiHYsFeseekartvlrNvaellasGGkvlgTtpdgdelskltvkklkvi 203
                 +RY   r+ +      Fda ++++d+f+ s+ e + + + +fdivslQF++HY+Fese+kar++l+Nv+++l +GG +lgT+p++d +     ++lk+ 
  EPX71752.1 160 RRY---RELQPC----FDALFYAGDCFSRSIGEFLPPDQRHFDIVSLQFCLHYAFESEQKARRLLENVSKCLSRGGIMLGTIPNSDII----SQRLKEL 247
                 ***...444444....************************************************************************....9999999 PP

    Pox_MCEL 204 ekdlpsfgNsiyvvkfeeekiev..plfGakYeynledvvkdvpEyivkfealvklaeeYgleLvdkkdfaeiieesikke.lkklikrvskleerkst 299
                  + + s+gNsiy+v+f + ++++  p+fG++Y+++led+v+dvpEy+v+fea++++ae Y+leL+++k+f +i++e+ ++e + +l++r++        
  EPX71752.1 248 PPSADSWGNSIYKVRFTQRPSHTfrPPFGIQYYFYLEDAVTDVPEYVVPFEAFRAIAETYDLELLWQKPFVDIFNEEKNSEtFGSLMDRMK-------- 338
                 99***************99888899****************************************************98888999999999........ PP

    Pox_MCEL 300 knfeelnrsalkstlgkdeeealsyYlvfvfeKr 333
                      + +s++k++++ +e ea+s+Yl+f+feKr
  EPX71752.1 339 -----VIDSNGKRGIDPQELEAASFYLAFAFEKR 367
                 .....778899999*******************7 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.5   0.0   4.6e-19   8.2e-16       1      97 []     123     228 ..     123     228 .. 0.90

  Alignments for each domain:
  == domain 1  score: 58.5 bits;  conditional E-value: 4.6e-19
                      EEEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTT..TEEEEESBC......CGBSSSTTTEEEEEEESTGGG.SS.HHHHHH CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeegl..nvefvqgda......edlpfedgsfDlvvssgalhh.ls.dedlek 84 
                      vLdlGcG+G +++++ k+ g + ++g+Di+e+ +++a++r++e ++  ++ f+ gd+      e lp ++++fD+v ++++lh+ ++ ++++++
       EPX71752.1 123 VLDLGCGKGGDLIKWDKA-GIEGYIGIDIAENSVDQAKRRYRELQPcfDALFYAGDCfsrsigEFLPPDQRHFDIVSLQFCLHYaFEsEQKARR 215
                      9*****************.699*********************88889999******77555444899999************98651566799 PP

                      HHHHHHHHEEEEE CS
  Methyltransf_25  85 alkeiarvLkpgG 97 
                      +l++++++L  gG
       EPX71752.1 216 LLENVSKCLSRGG 228
                      ***********99 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.4   0.0   3.9e-13     7e-10       1      94 [.     124     230 ..     124     232 .. 0.89

  Alignments for each domain:
  == domain 1  score: 39.4 bits;  conditional E-value: 3.9e-13
                      EEET-TTSHHHHHHHHTT.SEEEEEES-HHHHHHHHHHCCHHT-.......EEEETTEECCC.TSS-TT-EEEEEEES-CCC-....CCHHHHH CS
  Methyltransf_11   1 LdvGcGtGrlaealakrg.arvvgvDlskemlklakekaseegl.......kvefvvadaek.lpfednsfDlvvssevlhhv....edpekal 81 
                      Ld+GcG+G  + ++ k+g + ++g+D++++ +++ak++++e ++         ++   ++ + lp     fD+v ++++lh+     ++ +++l
       EPX71752.1 124 LDLGCGKGGDLIKWDKAGiEGYIGIDIAENSVDQAKRRYRELQPcfdalfyAGDCFSRSIGEfLPPDQRHFDIVSLQFCLHYAfeseQKARRLL 217
                      8*****************************************999976655444555555555798999**************999889***** PP

                      HHHHHHEEEEEEE CS
  Methyltransf_11  82 keiaRvLkpgGll 94 
                      +++ ++L  gG++
       EPX71752.1 218 ENVSKCLSRGGIM 230
                      ***********97 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.1   0.0   5.5e-13   9.9e-10       1      98 [.     124     229 ..     124     230 .. 0.84

  Alignments for each domain:
  == domain 1  score: 39.1 bits;  conditional E-value: 5.5e-13
  Methyltransf_12   1 LeiGcGtGsllralleklpdie.ytgvDispsaiedakeklakrennnnnnvelealdlldldgg.......ssfDlvvasnvlhhl....kdi 82 
                      L++GcG G  l  + ++  +ie y+g+Di ++++++ak++ ++ ++ + + +   ++   +++ g        +fD+v + ++lh+     ++ 
       EPX71752.1 124 LDLGCGKGGDLIKWDKA--GIEgYIGIDIAENSVDQAKRRYRELQPCFDALFYAGDCF--SRSIGeflppdqRHFDIVSLQFCLHYAfeseQKA 213
                      8****************..665277******************998654444444433..3333347899********************9999 PP

  Methyltransf_12  83 revldnirklLkpgGr 98 
                      r++l+n+ k+L+ gG+
       EPX71752.1 214 RRLLENVSKCLSRGGI 229
                      9**************7 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.8   0.0   8.4e-13   1.5e-09       2     118 ..     118     247 ..     117     272 .. 0.75

  Alignments for each domain:
  == domain 1  score: 37.8 bits;  conditional E-value: 8.4e-13
  Methyltransf_31   2 dkglrvlDlGCGtGeltfelaeelgpkae.vvGiDiseeaielArenaqklgld.nveFeqgdieeleklled......ekfDlilsnevl.na 86 
                      dk l vlDlGCG+G +++++  ++g  +e ++GiDi e+++ +A+ + ++l+    + F +gd ++ +  + +      + fD++  +  l +a
       EPX71752.1 118 DKPLLVLDLGCGKGGDLIKWD-KAG--IEgYIGIDIAENSVDQAKRRYRELQPCfDALFYAGDCFSRS--IGEflppdqRHFDIVSLQFCLhYA 206
                      566779***************.544..4459******************9998889*****9999844..4444445789****8776445466 PP

  Methyltransf_31  87 ladpdki...leeiervlkpggilliedpr......llael 118
                      + + +k+   le++++ l+ ggi+l + p+       l+el
       EPX71752.1 207 FESEQKArrlLENVSKCLSRGGIMLGTIPNsdiisqRLKEL 247
                      66665552226699999*99999998777755544444444 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.2   0.0   4.8e-11   8.5e-08      15     125 ..     111     245 ..      96     278 .. 0.79

  Alignments for each domain:
  == domain 1  score: 32.2 bits;  conditional E-value: 4.8e-11
  Methyltransf_23  15 rllpk.lraggrvLdiGcGtGillevlrengf.svtgvDlspeaveiae..........kakkaqkdqfdeq...eaaepqgkfdlIvlrevle 93 
                      ++ pk ++++  vLd+GcG+G  l    + g   ++g+D+ ++ v+ a+           a ++  d+f ++   + +++q++fd+++l ++l+
       EPX71752.1 111 KFTPKvDDKPLLVLDLGCGKGGDLIKWDKAGIeGYIGIDIAENSVDQAKrryrelqpcfDALFYAGDCFSRSigeFLPPDQRHFDIVSLQFCLH 204
                      444444788889********************4577**********999889988888877777777776556667777*********999998 PP

  Methyltransf_23  94 hvpdpp....ellrqiatllkpgGylllseplasl.....k 125
                           +    +ll ++ ++l+ gG +l + p+++      k
       EPX71752.1 205 YAFESEqkarRLLENVSKCLSRGGIMLGTIPNSDIisqrlK 245
                      7654333344*********************9886444330 PP

>> Methyltransf_4  Putative methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   3.5e-05     0.063       4      48 ..     122     165 ..     119     181 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 3.5e-05
                     EEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHHHHHC CS
  Methyltransf_4   4 vvleiGcGkGeflvalAkknPdknflGiEirvkvvakvlkkieal 48 
                     +vl++GcGkG+ l++  k+     ++Gi+i +++v+++ ++ ++l
      EPX71752.1 122 LVLDLGCGKGGDLIKWDKAGI-EGYIGIDIAENSVDQAKRRYREL 165
                     799************987765.57**************9998876 PP

>> VRP3  Salmonella virulence-associated 28kDa protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   6.7e-05      0.12     162     204 ..     200     242 ..     191     248 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 6.7e-05
                 STTS---HHHHHHHHHHHHHHHHHHHHTT--B----TT-B--T CS
        VRP3 162 qeesqysaellhktrqfiealesrlsesgivpGeyPesdvrPe 204
                 q + +y+ e+ +k r+++e + + ls++gi+ G +P+sd+  +
  EPX71752.1 200 QFCLHYAFESEQKARRLLENVSKCLSRGGIMLGTIPNSDIISQ 242
                 66778999999****************************9765 PP

>> Methyltransf_32  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00022      0.39      17      79 ..     109     170 ..      94     227 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00022
  Methyltransf_32  17 lkel..akesgaltvvDvGaGkgYLsfvlalkekeyklkvvgidakeelvekaekraeklgkkfn 79 
                      ++++  + ++++l v+D+G+Gkg  +  ++ +++  +   +gid+ e+ v++a++r ++l+  f+
       EPX71752.1 109 IQKFtpKVDDKPLLVLDLGCGKG--GDLIKWDKAGIE-GYIGIDIAENSVDQAKRRYRELQPCFD 170
                      33335545778899********9..788887444444.457******************997664 PP

>> NNMT_PNMT_TEMT  NNMT/PNMT/TEMT family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   0.00024      0.42     158     196 ..     193     231 ..     183     239 .. 0.92

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00024
                     .EEEEEEESSHHHH-SSHHHHHHHHHHHHTTEEEEEEEE CS
  NNMT_PNMT_TEMT 158 kadvvvtifcleaacedleeylralrnlasllkpGGhlv 196
                     ++d+v+  fcl +a e+ ++ +r l+n+ + l  GG+++
      EPX71752.1 193 HFDIVSLQFCLHYAFESEQKARRLLENVSKCLSRGGIML 231
                     69**********************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (369 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       493  (0.0274974); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.63u 0.28s 00:00:00.91 Elapsed: 00:00:00.50
# Mc/sec: 2231.92
//
Query:       EPX71753.1  [L=1342]
Description: BTB/POZ domain-containing protein Btb1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-23   82.2   0.0    6.1e-07   30.0   0.0    4.6  4  RCC1      Regulator of chromosome condensation (RCC1) repeat
    8.3e-23   80.7   4.1    1.3e-12   47.9   0.2    3.3  3  BTB       BTB/POZ domain
      7e-11   42.4   0.1    3.8e-06   27.4   0.0    2.8  2  Ank_4     Ankyrin repeats (many copies)
    1.1e-09   38.7   0.0    2.9e-09   37.4   0.0    1.6  1  Ank_2     Ankyrin repeats (3 copies)
    5.3e-09   35.6   6.8      2e-06   27.5   0.2    4.8  5  RCC1_2    Regulator of chromosome condensation (RCC1) repeat
    4.3e-08   33.3   0.1     0.0018   18.5   0.0    2.5  2  Ank_5     Ankyrin repeats (many copies)
    1.1e-06   28.8   0.1      0.052   14.0   0.1    2.7  2  Ank       Ankyrin repeat
      4e-06   26.8   0.1       0.11   13.2   0.0    3.1  2  Ank_3     Ankyrin repeat


Domain annotation for each model (and alignments):
>> RCC1  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0     0.018        40       3      50 .]     148     208 ..     147     208 .. 0.74
   2 !   17.1   0.0   2.8e-06    0.0062       3      50 .]     215     260 ..     215     260 .. 0.83
   3 !   30.0   0.0   2.7e-10   6.1e-07       2      49 ..     264     317 ..     264     318 .. 0.82
   4 !   24.2   0.0   1.7e-08   3.8e-05       3      48 ..     322     365 ..     320     367 .. 0.83

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.018
                 EEEEEE--GGGTTSS...SS-...--E.EEEEE-GGGTTS......-EEEEEEETTEEEEE CS
        RCC1   3 rVysWGrndyGqLGl...gtt...esv.lvPtkveglsgn......rvvkvacGddhtval 50 
                 ++ys G n++  LG    g++   ++v l+ ++++ +++       r+v++ +  +ht+++
  EPX71753.1 148 ELYSLGDNENSILGFtvsGKQdmaKRVfLYRRQMSDSTSGqlfhpdRIVDIQSSKFHTLVV 208
                 69*************7764444543335566666666666889999999999999999975 PP

  == domain 2  score: 17.1 bits;  conditional E-value: 2.8e-06
                 EEEEEE--GGGTTSSSS---E.EEE.EE-GGGTTS-EEEEEEETTEEEEE CS
        RCC1   3 rVysWGrndyGqLGlgttesv.lvP.tkveglsgnrvvkvacGddhtval 50 
                 +Vys+G +  G+LG  ++ +   +P + ++     +vv+++  ++h++al
  EPX71753.1 215 NVYSCGIGAGGRLGFRKDAQYtFIPvSDLPY----KVVQISVSQNHSLAL 260
                 59****************7773667333333....*************97 PP

  == domain 3  score: 30.0 bits;  conditional E-value: 2.7e-10
                 TEEEEEE--GGGTTSSSS---E......EEEEE-GGGTTS-EEEEEEETTEEEE CS
        RCC1   2 GrVysWGrndyGqLGlgttesv......lvPtkveglsgnrvvkvacGddhtva 49 
                 G+Vy+WG n+y  LG   + s+        P++++ +++ +++ +++Gd +++a
  EPX71753.1 264 GNVYAWGLNTYFALGFNVDSSKkedfiqVSPKRISAFKDLNIIGIVAGDTYSAA 317
                 99**************66633323444334**********************98 PP

  == domain 4  score: 24.2 bits;  conditional E-value: 1.7e-08
                 EEEEEE--GGGTTSSSS-.--EEEEEE-GGGTTS-EEEEEEETTEEE CS
        RCC1   3 rVysWGrndyGqLGlgtt.esvlvPtkveglsgnrvvkvacGddhtv 48 
                 ++y+WG  ++GqLG++++    ++P++v+g s+ +vvk++c ++h++
  EPX71753.1 322 DLYTWG-QNEGQLGHPDDsFIISTPRRVAGISS-PVVKATC-NSHSL 365
                 69****.678*****999755588******997.******9.55655 PP

>> BTB  BTB/POZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.9   0.2   5.8e-16   1.3e-12       9     103 ..     620     729 ..     614     735 .. 0.90
   2 !   32.3   0.1   4.2e-11   9.5e-08       9     108 ..     757     869 ..     747     872 .. 0.84
   3 ?   -0.6   0.0      0.69   1.5e+03      82     110 ..     875     903 ..     870     904 .. 0.89

  Alignments for each domain:
  == domain 1  score: 47.9 bits;  conditional E-value: 5.8e-16
                 TTS-EEEEETTTEEEEE-HHHHHHH-HHHHHHHTST..........TTTTCCCEEEEETTSGHHHHHHHHHHHHHSEEEC-.....CGGGHH.HHHHHH CS
         BTB   9 elcDvtlvvgdgkefkahkavLaarSpyFkalftsk..........eieessvseielddvepeafealLefiYtgeleit.....seenle.elLaaa 91 
                 +  D+ l++  +k+f +hk+ L+arS+++++++             +i+e+++ ++  +dv++ +++ lL+++Y++ l  +     + +n++ elL++ 
  EPX71753.1 620 SSADICLQCV-DKTFWCHKFLLSARSSVLRQILCTSrnvkkaclqyRIDEKEKPTLVFTDVSAMSVAVLLHYLYSDSLLQPwkcdsRFMNIKeELLKLS 717
                 568*******.6*********************9999*********99999999***************************99*996677751688888 PP

                 HHHT-HHHHHHH CS
         BTB  92 dllqiprlkkac 103
                 ++l++p+l +++
  EPX71753.1 718 RILDLPHLHEVL 729
                 *******98865 PP

  == domain 2  score: 32.3 bits;  conditional E-value: 4.2e-11
                 TTS-EEEEETTTEEEEE-HHHHHHH-HHHHHHHTST...TTTTCCCEEEEETTSGHHHHHHHHHHHHH.SEEEC-..........CGGGHHHHHHHHHH CS
         BTB   9 elcDvtlvvgdgkefkahkavLaarSpyFkalftsk...eieessvseielddvepeafealLefiYt.geleit..........seenleelLaaadl 93 
                 + cD +++++ + e+ka+ + L  +S+yF++ ft     + +++++  ++l+d +   f+ +L+ iY  g+lei             e++  +L++ d 
  EPX71753.1 757 DSCDTIIKLE-DGEIKANSLLLRIHSDYFDSFFTFLegqSPSKAEQYIVNLPDKSLFQFQLILRHIYGnGNLEIFddmkdydfysWLETMTVMLSISDE 854
                 57********.599******************99775553344555589******************5256666699******97668889999999** PP

                 HT-HHHHHHHHHHHH CS
         BTB  94 lqiprlkkaceeflk 108
                 l + rlk++ce+ l 
  EPX71753.1 855 LLFSRLKEICEQSLL 869
                 ***********9986 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.69
                 GGHHHHHHHHHHHT-HHHHHHHHHHHHHH CS
         BTB  82 enleelLaaadllqiprlkkaceeflkqs 110
                 ++l++++++ + ++ ++l + c ++ +++
  EPX71753.1 875 KTLNDMFELSSCYHAYSLYNRCVDYACHN 903
                 68999*******************99986 PP

>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.0     8e-05      0.18      23      44 ..      41      63 ..      35      67 .. 0.83
   2 !   27.4   0.0   1.7e-09   3.8e-06      17      55 .]      68     107 ..      61     107 .. 0.94

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 8e-05
       Ank_4 23 kgadinaqdnrsGetalhiAa..k 44
                ++ d+n   +r+G+t lhiAa  k
  EPX71753.1 41 SKLDVNTK-DRYGRTILHIAAfeK 63
                6799***9.***********9554 PP

  == domain 2  score: 27.4 bits;  conditional E-value: 1.7e-09
       Ank_4  17 vrlLlek.gadinaqdnrsGetalhiAakrgnveilklLl 55 
                 vr+Ll++ g d+  qd +sG talh+A++ gn+e++ lLl
  EPX71753.1  68 VRSLLQHkGLDVLIQDEESGYTALHRAVYVGNLEAASLLL 107
                 9*****999******99*********************98 PP

>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.4   0.0   1.3e-12   2.9e-09      20      75 ..      43     109 ..       9     116 .. 0.84

  Alignments for each domain:
  == domain 1  score: 37.4 bits;  conditional E-value: 1.3e-12
       Ank_2  20 adpn.k..ngktaLhyAakngnleivklLleh.......ad.ndgrtpLhyAarsghleivklLlek 75 
                  d+n k   g+t+Lh+Aa + ++++v+ Ll+h       +d ++g+t+Lh A+  g+le++ lLl k
  EPX71753.1  43 LDVNtKdrYGRTILHIAAFEKKNNFVRSLLQHkgldvliQDeESGYTALHRAVYVGNLEAASLLLSK 109
                 456663589**********9999********9996766555899*********99**********65 PP

>> RCC1_2  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0     0.029        66       1      24 [.     195     220 ..     195     223 .. 0.88
   2 !   27.5   0.2   8.8e-10     2e-06       1      28 [.     247     274 ..     247     275 .. 0.97
   3 ?    3.7   0.1     0.025        56      17      27 ..     321     330 ..     305     332 .. 0.70
   4 ?    0.4   0.1      0.27     6e+02       9      21 ..     362     375 ..     361     376 .. 0.78
   5 ?   -3.1   0.0       3.4   7.7e+03      13      21 ..     421     429 ..     420     430 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.029
      RCC1_2   1 VksvsaGdyHscaLtedGe..VlcWG 24 
                 ++++ +  +H++++t++    V+++G
  EPX71753.1 195 IVDIQSSKFHTLVVTDEASpnVYSCG 220
                 68999999*******99888888888 PP

  == domain 2  score: 27.5 bits;  conditional E-value: 8.8e-10
      RCC1_2   1 VksvsaGdyHscaLtedGeVlcWGsNsd 28 
                 V+++s   +Hs+aLt+ G+V++WG N++
  EPX71753.1 247 VVQISVSQNHSLALTDIGNVYAWGLNTY 274
                 89************************96 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.025
      RCC1_2  17 dGeVlcWGsNs 27 
                 + ++++WG+N+
  EPX71753.1 321 S-DLYTWGQNE 330
                 4.4*******5 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.27
      RCC1_2   9 yHscaLt.edGeVl 21 
                 +Hs++L+ e+++Vl
  EPX71753.1 362 SHSLVLLlENNTVL 375
                 8****554899987 PP

  == domain 5  score: -3.1 bits;  conditional E-value: 3.4
      RCC1_2  13 aLtedGeVl 21 
                 +Lte GeV+
  EPX71753.1 421 ILTEQGEVF 429
                 59*****98 PP

>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   5.6e-06     0.013       7      48 ..      43      85 ..      40      86 .. 0.93
   2 !   18.5   0.0     8e-07    0.0018       2      55 ..      72     128 ..      71     129 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 5.6e-06
       Ank_5  7 advnrldgggntpLhvAakygaadvvrlLl.argadlnltdsr 48
                 dvn++d++g t+Lh+Aa     + vr Ll   g+d  ++d++
  EPX71753.1 43 LDVNTKDRYGRTILHIAAFEKKNNFVRSLLqHKGLDVLIQDEE 85
                69****************************9999999999875 PP

  == domain 2  score: 18.5 bits;  conditional E-value: 8e-07
       Ank_5   2 lehg.padvnrldgggntpLhvAakygaadvvrlLl..argadlnltdsrGltaldl 55 
                 l+h     +   ++ g+t+Lh A++ g+++ + lLl  ++   l+++d +Gl++++l
  EPX71753.1  72 LQHKgLDVLIQDEESGYTALHRAVYVGNLEAASLLLskDPYNLLKVKDHEGLSPFQL 128
                 66663444444567899********************999999***********987 PP

>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   0.0    0.0001      0.23       1      31 [.      51      83 ..      51      84 .. 0.85
   2 !   14.0   0.1   2.3e-05     0.052       2      27 ..      87     111 ..      86     116 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.0001
                TSBBHHHHHHHHTTHHHHHHHH.T.TTSTTCBT CS
         Ank  1 dGnTPLHlAatngkkriiklLL.h.GAnlnald 31
                +G+T LH+Aa ++k + ++ LL h G ++ ++d
  EPX71753.1 51 YGRTILHIAAFEKKNNFVRSLLqHkGLDVLIQD 83
                69********888888******97787777776 PP

  == domain 2  score: 14.0 bits;  conditional E-value: 2.3e-05
                 SBBHHHHHHHHTTHHHHHHHHTTTST CS
         Ank   2 GnTPLHlAatngkkriiklLLhGAnl 27 
                 G+T+LH+A++ g+++ ++lLL + ++
  EPX71753.1  87 GYTALHRAVYVGNLEAASLLL-SKDP 111
                 9********************.5465 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.0   4.8e-05      0.11       1      30 [.      51      80 ..      51      81 .. 0.95
   2 !   10.4   0.0   0.00037      0.84       2      24 ..      87     109 ..      86     115 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 4.8e-05
       Ank_3  1 nGetpLhlAarsgnleivkfLlenkgadvn 30
                +G+t+Lh+Aa   + + v+ Ll++kg dv 
  EPX71753.1 51 YGRTILHIAAFEKKNNFVRSLLQHKGLDVL 80
                79************************9985 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00037
       Ank_3   2 GetpLhlAarsgnleivkfLlen 24 
                 G+t+Lh+A+  gnle + +Ll +
  EPX71753.1  87 GYTALHRAVYVGNLEAASLLLSK 109
                 9**************9***9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1342 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1219  (0.0679904); expected 358.6 (0.02)
Passed bias filter:                      545  (0.0303977); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.97u 0.31s 00:00:01.28 Elapsed: 00:00:00.52
# Mc/sec: 7813.38
//
Query:       EPX71754.1  [L=185]
Description: succinate dehydrogenase cytochrome b subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-27   94.7   1.0    4.7e-27   94.4   1.0    1.1  1  Sdh_cyt   Succinate dehydrogenase/Fumarate reductase transmem


Domain annotation for each model (and alignments):
>> Sdh_cyt  Succinate dehydrogenase/Fumarate reductase transmembrane subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.4   1.0   2.6e-31   4.7e-27       2     119 ..      60     180 ..      59     182 .. 0.91

  Alignments for each domain:
  == domain 1  score: 94.4 bits;  conditional E-value: 2.6e-31
     Sdh_cyt   2 rknrplsphlqlyrlplgawlsilhritGvallvglllllvwlllalslsspesfarvvallas...piklilllllllallyHllnGiRhllwDlglg 97 
                 r +rp+sphl++y ++l+++ls lhr+tGv+l+++l+l+   +l+a++++ + +++++++l+++   +ik+   +++ ++l +H++nG+Rhl+wD+ + 
  EPX71754.1  60 RLRRPNSPHLSIYEPQLTWYLSSLHRVTGVVLAGTLYLFATGYLVAPLAGYSLDTETISSLVQQvpaWIKVPAKFAISYPLTFHIFNGLRHLVWDTTKE 158
                 679*******************************77777778899999**********6666556559999999*********************9899 PP

     Sdh_cyt  98 lelesarksalavlalavalvl 119
                 l+l+ ++++++a+l+l+v+++ 
  EPX71754.1 159 LTLKGVYRTGYAALILSVLTSG 180
                 9****************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       377  (0.0210274); expected 358.6 (0.02)
Passed bias filter:                      300  (0.0167327); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.28s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1308.98
//
Query:       EPX71755.1  [L=239]
Description: DNA-directed RNA polymerase III complex subunit Rpc37 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.5e-35  121.7   0.2    5.3e-35  121.5   0.2    1.0  1  Sin_N     Sin-like protein conserved region


Domain annotation for each model (and alignments):
>> Sin_N  Sin-like protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.5   0.2   2.9e-39   5.3e-35       2     217 ..      19     215 ..      18     236 .. 0.79

  Alignments for each domain:
  == domain 1  score: 121.5 bits;  conditional E-value: 2.9e-39
       Sin_N   2 dDpVveeidVylskslsdkLyllQYPlrpadrpy...ddeqvkevrvkpkqqklelelaidtesknydknkgeqlalaadgktkasektfsselmdkqt 97 
                 +DpVv++++Vy s++l ++L l QYPlrp++r y     e+  ++r+kpk+  +e+e++i t  + +d++k+++++         +++ +++++  +++
  EPX71755.1  19 NDPVVRTLPVYYSPALRNHLLLNQYPLRPKNREYssrTGETPVNARIKPKTGWMEMEVPIPT-ANYFDEEKAKKYS--------SEQQPLRTQVLAGRL 108
                 6*********************************5333467788****************99.579**********........334446666666555 PP

       Sin_N  98 lsssraldasnyavGilkdgelhltPlegilqlrpsfsyldkadkkkkeklsqqeskaeneeqdeeeeeakavtvkfkraeterqkkareqSyallkkk 196
                 ++     +++n +vG++++g+lh+ Pl+g  qlrps++++d+ +++ k+  s+ ++++++ + +++     a++v++k+     + +a + S  ++ ++
  EPX71755.1 109 QQ-----PQTNLMVGLIRNGQLHIVPLRGLTQLRPSMRHVDDHTQRVKA--STTSTTSQP-NASSSRGPIRAIQVTAKQ-----NSEAPKLSTTHIIRA 194
                 55.....559*******************************99999994..333444444.223444556777777776.....7777788999***** PP

       Sin_N 197 eeeEpWiklevheqessesea 217
                  eeE+W ++++ e e+  s a
  EPX71755.1 195 TEEEEWQPVDIRENEEALSVA 215
                 ***********8866555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       612  (0.0341346); expected 358.6 (0.02)
Passed bias filter:                      348  (0.0194099); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1758.39
//
Query:       EPX71756.1  [L=149]
Description: 60S ribosomal protein L24 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-31  108.7   0.1    2.9e-31  107.5   0.1    1.6  1  Ribosomal_L24e  Ribosomal protein L24e


Domain annotation for each model (and alignments):
>> Ribosomal_L24e  Ribosomal protein L24e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.5   0.1   1.6e-35   2.9e-31       1      66 []       1      66 [.       1      66 [. 0.98

  Alignments for each domain:
  == domain 1  score: 107.5 bits;  conditional E-value: 1.6e-35
                    XXX-B-TTT-SB--SS--EEEE-TTS-EEEESSHHHHHHHHTT--GGGSTTSTTT-XXXXXXXX.. CS
  Ribosomal_L24e  1 mktekCsFsgykiyPGhGkrfvrnDgkvfrFlssKceklfkqkrnPrklkWTkayRrahkkeltee 66
                    mk+e+CsFsg+k+yPG G++fvr D+kvfrF+++K+e+lf+q++nPr+l WT++yRr+hkk+l+ee
      EPX71756.1  1 MKVEICSFSGAKVYPGAGRLFVRGDNKVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHKKGLSEE 66
                    9*************************************************************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1522  (0.0848904); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.20s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1169.53
//
Query:       EPX71757.1  [L=351]
Description: AUR protein kinase Ark1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.9e-74  250.4   0.0    2.2e-74  250.1   0.0    1.1  1  Pkinase         Protein kinase domain
    1.3e-47  162.3   0.0    1.6e-47  162.0   0.0    1.1  1  Pkinase_Tyr     Protein tyrosine kinase
    5.5e-10   39.0   0.0    1.4e-08   34.4   0.0    2.1  2  Kinase-like     Kinase-like
    0.00017   20.7   0.1    0.00024   20.2   0.1    1.2  1  Haspin_kinase   Haspin like kinase domain
     0.0003   20.2   0.1     0.0005   19.5   0.1    1.3  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
    0.00034   19.5   0.0    0.00038   19.4   0.0    1.2  1  Pkinase_fungal  Fungal protein kinase
  ------ inclusion threshold ------
      0.012   15.3   0.1      0.044   13.4   0.0    1.8  2  RIO1            RIO1 family
      0.023   14.3   0.1       0.12   12.0   0.0    1.9  2  FTA2            Kinetochore Sim4 complex subunit FTA2
      0.034   13.7   0.1      0.057   12.9   0.1    1.4  1  YrbL-PhoP_reg   PhoP regulatory network protein YrbL


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  250.1   0.0   1.1e-77   2.2e-74       1     264 []      89     340 ..      89     340 .. 0.94

  Alignments for each domain:
  == domain 1  score: 250.1 bits;  conditional E-value: 1.1e-77
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HH CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslsee 98 
                 +e  + lG+G+fG+Vy a+ek+tg ivA+K++ k++  +++  k+v+rEi+i  +l+h+ni+rl++ f+++++++l+le++  gel ++l++ + +se+
  EPX71757.1  89 FEIGKPLGKGKFGRVYLAKEKKTGFIVALKTLHKSELIHSRIeKQVRREIEIQSNLRHKNILRLFGHFHDEKRIFLILEFAGRGELYQHLRKASRFSES 187
                 577899****************************997776655************************************************9999**** PP

                 HHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-ST CS
     Pkinase  99 eakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelessskltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgkppf 197
                 +a k+++q++++l+ylH+k++iHrD+KpeNiL+  +ge+K++DFG + ++ s+   t+ +gt +Yl+PE+++++e+++kvD+WslGv+ ye++ g ppf
  EPX71757.1 188 TAAKYIYQMANALAYLHKKHVIHRDIKPENILLGIDGEIKLSDFGWSVHAPSNR-RTTLCGTLDYLPPEMVEGKEHTEKVDLWSLGVLTYEFIVGAPPF 285
                 **************************************************9988.9******************************************* PP

                 TTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 198 sgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 ++ +g++ +++ +             k++l+ +s +s+e kdl+++ll+  p++R++ e++++hp++
  EPX71757.1 286 EDVSGHSATYRRIA------------KVDLKIPSFVSPEGKDLISRLLRHSPEQRISLEQVVKHPWI 340
                 *6666553333333............468889999*******************************7 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  162.0   0.0     8e-51   1.6e-47       2     257 ..      90     336 ..      89     337 .. 0.93

  Alignments for each domain:
  == domain 1  score: 162.0 bits;  conditional E-value: 8e-51
                  EEEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTS.SHHH.HHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCT CS
  Pkinase_Tyr   2 elgkklGeGafGkVvegtlkgekekkevkVavKtlkeea.teee.keelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkek 97 
                  e+gk lG+G+fG+V+ ++ k    k+   Va+Ktl+++   +++ ++++ +e++i ++l+h+ni++l g   +e+++++++e++  G+L ++Lrk   
   EPX71757.1  90 EIGKPLGKGKFGRVYLAKEK----KTGFIVALKTLHKSElIHSRiEKQVRREIEIQSNLRHKNILRLFGHFHDEKRIFLILEFAGRGELYQHLRKA-- 181
                  68999************999....999********6544133334889999********************************************8.. PP

                  TTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHH CS
  Pkinase_Tyr  98 ekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfGvll 195
                  ++++ ++  ++++q+A++++yL++k+++Hrd+   N+Ll  +  +k+sDfG + +       +++++    + +++pE+++ k+ t+k D Ws Gvl+
   EPX71757.1 182 SRFSESTAAKYIYQMANALAYLHKKHVIHRDIKPENILLGIDGEIKLSDFGWSVHA----PSNRRTTLCGTLDYLPPEMVEGKEHTEKVDLWSLGVLT 275
                  9***************************************************9988....455566777899************************** PP

                  HHHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 196 wEiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfselve 257
                  +E +  g+ p+++++ ++++ +  ++  l+ p+ +++e ++l+++ ++++pe+R +++++v+
   EPX71757.1 276 YEFIV-GAPPFEDVSGHSATYRRIAKVDLKIPSFVSPEGKDLISRLLRHSPEQRISLEQVVK 336
                  **998.********99998888889999*******************************987 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0     0.037        74      17      67 ..      92     141 ..      88     151 .. 0.73
   2 !   34.4   0.0   7.2e-12   1.4e-08     136     288 .]     179     328 ..     171     328 .. 0.79

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.037
  Kinase-like  17 gellkkgdrsvvfevkdqetgeplavkvfllpseaskkdlerlkeqelair 67 
                  g++l+kg+++ v+++k+++tg  +a+k  l +se  ++ +e+  + e+ i+
   EPX71757.1  92 GKPLGKGKFGRVYLAKEKKTGFIVALKT-LHKSELIHSRIEKQVRREIEIQ 141
                  789****************998777775.4455666666666666555555 PP

  == domain 2  score: 34.4 bits;  conditional E-value: 7.2e-12
  Kinase-like 136 et..hkkletiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvlseve..kgfaPpEllgsrggytrknktkmth 229
                   +  ++++ t+a+ +   q+ +  a+L++k ++h +++++n+ll  +g ++l +f+  v a  + +  + +    + PpE++  +           t 
   EPX71757.1 179 RKasRFSESTAAKYIY--QMANALAYLHKKHVIHRDIKPENILLGIDGEIKLSDFGWSVHAPSNRR-TTLCgtLDYLPPEMVEGKE---------HTE 264
                  3334788888888877..99*****************************************99999.7777345578****98844.........589 PP

  Kinase-like 230 kldaWqlGlviyriwclklPltlateeakeew.kfklck.kipekv....kaLlkkfLqlsqedR 288
                  k+d W lG+  y       P++ +  + +  +    ++  kip +v    k L+ ++L+ s e+R
   EPX71757.1 265 KVDLWSLGVLTYEFIVGAPPFEDVS-GHSATYrRIAKVDlKIPSFVspegKDLISRLLRHSPEQR 328
                  ************9998888887665.444444366667777888884444679999999988877 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.1   1.2e-07   0.00024     169     257 ..     142     237 ..      96     263 .. 0.76

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 1.2e-07
  Haspin_kinase 169 dkvlkek.....pdfyseqqlflvlllkdkGtdLeev...klkswkqalsifwqivkiLyvaEtkfeFEHRdLhldniLvdknlnvtlidlklsRl 256
                    +++ +++       f +e+++fl+l++  +G+  +++   +  s ++a +  +q+++ L+   +k    HRd++ +niL+   +++ l d+  s  
     EPX71757.1 142 SNLRHKNilrlfGHFHDEKRIFLILEFAGRGELYQHLrkaSRFSESTAAKYIYQMANALAYLHKKH-VIHRDIKPENILLGIDGEIKLSDFGWSVH 236
                    444444455555899****************86666643266677899999***********9996.56*********************988765 PP

  Haspin_kinase 257 e 257
                     
     EPX71757.1 237 A 237
                    5 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.1   2.5e-07    0.0005      98     166 ..     167     231 ..     155     244 .. 0.85

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 2.5e-07
         Kdo  98 rlegaqdLedllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDl 166
                 + +g  +L ++l+k ++++e+  ++ + + + + a lh+ +v H+d+ + nill  ++    ei l D+
  EPX71757.1 167 EFAGRGELYQHLRKASRFSESTAAKYIYQMANALAYLHKKHVIHRDIKPENILLGIDG----EIKLSDF 231
                 56778889999999888*************************************9998....6777676 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   1.9e-07   0.00038     314     399 ..     195     270 ..      34     274 .. 0.89

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 1.9e-07
  Pkinase_fungal 314 DaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlkgeeHsyrhDLES 399
                     +  +++  L+ k+ ++HrDi  +Nil+       + +  L+D+ + ++    +++    +  GTl ++  e+++g+eH+   DL S
      EPX71757.1 195 QMANALAYLH-KKHVIHRDIKPENILLG-----IDGEIKLSDFGWSVHAPS-NRR---TTLCGTLDYLPPEMVEGKEHTEKVDLWS 270
                     5567888999.*****************.....788999*********995.333...469*******************999966 PP

>> RIO1  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1      0.53   1.1e+03       2      48 ..     103     150 ..     102     159 .. 0.74
   2 ?   13.4   0.0   2.2e-05     0.044      80     155 ..     161     237 ..     130     245 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.53
                 EEEEEETTTE.EEEEEEE-S---SS-HHHHCTTTSTTSTCG--GS-HH CS
        RIO1   2 Vyhavsedgk.evaiKiyktstteFkkrkkyvsgekrfkdrksktnpr 48 
                 Vy a ++++   va+K    s +   +++k+v +e + +++  ++n +
  EPX71757.1 103 VYLAKEKKTGfIVALKTLHKSELIHSRIEKQVRREIEIQSNLRHKNIL 150
                 788776443348899998888888889999998888877766666654 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 2.2e-05
                 TTEEEEE--EETTEEGGBHHHCG-..HHHHHHHHHHHHHHHHHHHHTSTEEESS-STTSEEEETT.EEEE--GTTEEET CS
        RIO1  80 rhvlvmefigedgvaapklkdvee..eeeaeelyeevleemrklykeaglvHaDLSeyNvlvded.kvviIDvsQavel 155
                 r  l++ef g +g  +++l+++++  e+ a+++ +++ +   + +++ +++H D+   N+l+  d ++ + D++ +v++
  EPX71757.1 161 RIFLILEFAG-RGELYQHLRKASRfsESTAAKYIYQMAN-ALAYLHKKHVIHRDIKPENILLGIDgEIKLSDFGWSVHA 237
                 5579999999.8999999999994446666666666666.5566679***************99999*****9999976 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0      0.29   5.7e+02      24      91 ..      89     162 ..      65     177 .. 0.58
   2 ?   12.0   0.0   5.9e-05      0.12     171     206 ..     186     221 ..     176     235 .. 0.80

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.29
        FTA2  24 iefleyLgkglhsiVlkvkirgk..eYALKlFrfleaeele.......eaeedlkiprealkelasysdpfasECRA 91 
                 +e+ + Lgkg  ++V+ +k ++   + ALK   +    el           e + +++  +k++   + +f+ E R 
  EPX71757.1  89 FEIGKPLGKGKFGRVYLAKEKKTgfIVALKTLHKS---ELIhsriekqVRREIEIQSNLRHKNILRLFGHFHDEKRI 162
                 57778899999999999988888445566643333...332333443222222222333334444445555555555 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 5.9e-05
        FTA2 171 eelevsqlpkllrdlkklhklgIvvrDlkeenyidg 206
                 e++  +++ ++ + l  lhk ++++rD+k+en++ g
  EPX71757.1 186 ESTAAKYIYQMANALAYLHKKHVIHRDIKPENILLG 221
                 56778999************************9744 PP

>> YrbL-PhoP_reg  PhoP regulatory network protein YrbL
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   2.9e-05     0.057     104     155 ..     171     223 ..     113     230 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2.9e-05
  YrbL-PhoP_reg 104 dGnvaktLedlvkkeelta.elkeaLdefleelldnhivtndlsakNivvkkn 155
                     G++ + L++  +  e ta ++  ++ + l++l   h++ +d++++Ni+++ +
     EPX71757.1 171 RGELYQHLRKASRFSESTAaKYIYQMANALAYLHKKHVIHRDIKPENILLGID 223
                    577888888888877777668999*************************9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (351 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       392  (0.021864); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.52u 0.30s 00:00:00.82 Elapsed: 00:00:00.47
# Mc/sec: 2251.39
//
Query:       EPX71758.1  [L=186]
Description: inner membrane peptidase Atp23 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      2e-67  226.2   3.7    2.3e-67  226.0   3.7    1.0  1  Peptidase_M76  Peptidase M76 family
  ------ inclusion threshold ------
      0.027   14.3   2.5      0.031   14.1   0.7    1.8  2  SprT-like      SprT-like family


Domain annotation for each model (and alignments):
>> Peptidase_M76  Peptidase M76 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  226.0   3.7   2.6e-71   2.3e-67       2     171 .]      15     183 ..      14     183 .. 0.99

  Alignments for each domain:
  == domain 1  score: 226.0 bits;  conditional E-value: 2.6e-71
  Peptidase_M76   2 rcekavdellkesptvkfllksieklgceldserikcepCdekqaggfspeegillcenrlrskehledtlahElvhayDdlrakvdwsnlrhlAC 97 
                    +ce+ ++ ll++sp++ fl ks+  l++++d+++i+cepCdek++ggf p +gi+lcenr++s++++e+t+ahE++h++Dd+r++v+w++lrh+AC
     EPX71758.1  15 NCERVKKALLSDSPILVFLKKSLGYLNSDFDASDIRCEPCDEKTSGGFVPGKGIVLCENRIYSQKMAENTIAHEMIHWFDDCRFHVNWEDLRHHAC 110
                    8*********************************************************************************************** PP

  Peptidase_M76  98 seiRAanlsGecrvsrelrrgrklfkltkqhqkCvrrrAilsveanpkckdkeeaekaveevfesCfkDtePfd 171
                    seiRA++lsGecr+++el+ g+ + +++k+hq+Cv+rrA+lsv+ npkc++k++ae +v+evf sCf+Dt+Pf+
     EPX71758.1 111 SEIRASSLSGECRWTKELFYGN-IHTFRKHHQECVKRRATLSVQGNPKCQSKNQAEMIVQEVFASCFRDTRPFE 183
                    ********************95.89************************************************6 PP

>> SprT-like  SprT-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.7   3.5e-06     0.031      49      82 ..      68      99 ..      64     109 .. 0.77
   2 ?   -1.0   0.1      0.17   1.5e+03      33      41 ..     119     144 ..     101     170 .. 0.60

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 3.5e-06
   SprT-like 49 IeLseklldsrsedrllntLaHElcHlalfvisg 82
                I L e+ + s  ++  +nt+aHE++H    + ++
  EPX71758.1 68 IVLCENRIYS--QKMAENTIAHEMIHWFDDCRFH 99
                6666666666..999***********98766555 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.17
   SprT-like  33 aGranlkr.................a 41 
                  G++++ +                 +
  EPX71758.1 119 SGECRWTKelfygnihtfrkhhqecV 144
                 56666666555555543333333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       525  (0.0292822); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.44
# Mc/sec: 1268.66
//
Query:       EPX71759.1  [L=64]
Description: hypothetical protein SOCG_03695 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       253  (0.0141112); expected 358.6 (0.02)
Passed bias filter:                      203  (0.0113224); expected 358.6 (0.02)
Passed Vit filter:                         7  (0.000390429); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.42
# Mc/sec: 457.67
//
Query:       EPX71760.1  [L=180]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.3e-33  112.6   0.0    1.3e-32  112.2   0.0    1.2  1  UPF0113_N  UPF0113 Pre-PUA domain
    1.9e-26   92.1   0.0    4.1e-26   91.0   0.0    1.5  2  UPF0113    UPF0113 PUA domain
  ------ inclusion threshold ------
      0.068   13.2   0.0       0.12   12.4   0.0    1.3  1  PP1        Phloem filament protein PP1 cystatin-like domain
       0.13   12.2   0.0       0.44   10.5   0.0    1.8  2  PUA        PUA domain


Domain annotation for each model (and alignments):
>> UPF0113_N  UPF0113 Pre-PUA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.2   0.0   2.9e-36   1.3e-32       1      82 []       2      83 ..       2      83 .. 0.99

  Alignments for each domain:
  == domain 1  score: 112.2 bits;  conditional E-value: 2.9e-36
   UPF0113_N  1 RklseeetrivfekLtkyigdnvkelldrkdgtycfrlkkkrVyyvseellklaetikpenlisaGtclGkftktkkFrlsi 82
                R+l+ eet++ fekL++yig+n+  l+dr+d+ +cfrl+k+rVyyvse+ +kla ++++ nl+s+G+c+Gkftk++kFrl+i
  EPX71760.1  2 RPLTHEETKTFFEKLAQYIGKNITHLIDRPDDPHCFRLQKDRVYYVSENAMKLATSVARANLMSLGICFGKFTKSNKFRLHI 83
                99*******************************************************************************8 PP

>> UPF0113  UPF0113 PUA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       1.8   8.3e+03      46      51 ..      68      73 ..      42      86 .. 0.60
   2 !   91.0   0.0   9.1e-30   4.1e-26       1      76 []      96     175 ..      96     175 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 1.8
     UPF0113 46 lGiGki 51
                + +Gk+
  EPX71760.1 68 ICFGKF 73
                334444 PP

  == domain 2  score: 91.0 bits;  conditional E-value: 9.1e-30
     UPF0113   1 kvvvkekaeklFLYGrdvlkesilkitesvkenqvvvVlnengeplGiGkirkdt...k.aspgkivvknlaDiGeYlRr 76 
                 k++vk ++e+ FLYG++vlk ++ +it++++++q+v+V+++n++plG+G+++++t     ++p+ iv+ ++aD+GeYlR+
  EPX71760.1  96 KIWVKANGEMPFLYGNHVLKAHVGRITDDTPQHQGVIVYSMNDTPLGFGVTARSTvelArLDPTAIVAFHQADVGEYLRD 175
                 89*******************************************************955*******************5 PP

>> PP1  Phloem filament protein PP1 cystatin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   2.7e-05      0.12      38      62 ..      75      99 ..      67     105 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 2.7e-05
         PP1 38 dnlkfRlhvkakDfLgRvlkyeaiv 62
                ++ kfRlh+   D++ +  +y + v
  EPX71760.1 75 KSNKFRLHITSLDYIAQYARYKIWV 99
                566******************9988 PP

>> PUA  PUA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.48   2.2e+03       5      24 ..      47      68 ..      45      69 .. 0.77
   2 ?   10.5   0.0   9.9e-05      0.44       2      62 ..      96     156 ..      95     165 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.48
                E-HHHHHHHHT..T-EEEGGGE CS
         PUA  5 vddgAvkalls..gasLlapGv 24
                v ++A+k  +s  +a+L+  G+
  EPX71760.1 47 VSENAMKLATSvaRANLMSLGI 68
                6778888888888889987776 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 9.9e-05
                 EEEE-HHHHHHHHTT-EEEGGGEEEEETT--TTSEEEEEETTSCEEEEEEESS-HHHHHHH CS
         PUA   2 rvvvddgAvkallsgasLlapGvvevegdfeegdvVaivdedgelvavGlanysseelaki 62 
                 +++v+++     l+g ++l + v ++ +d  + + V +++ ++++++ G++  s+ ela+ 
  EPX71760.1  96 KIWVKANGEMPFLYGNHVLKAHVGRITDDTPQHQGVIVYSMNDTPLGFGVTARSTVELARL 156
                 56677777777789********************************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       436  (0.0243181); expected 358.6 (0.02)
Passed bias filter:                      415  (0.0231469); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1379.46
//
Query:       EPX71761.1  [L=559]
Description: signal recognition particle subunit Srp72 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.2e-11   44.0   4.6    6.3e-11   42.5   4.6    1.8  1  SRP72         SRP72 RNA-binding domain
    2.4e-07   30.8   1.9    2.4e-07   30.8   1.9    2.8  3  SRP_TPR_like  Putative TPR-like repeat
  ------ inclusion threshold ------
      0.034   14.2   3.4       0.14   12.3   3.4    2.0  1  bZIP_2        Basic region leucine zipper
      0.045   14.4   0.4       0.57   10.9   0.0    3.0  2  TPR_6         Tetratricopeptide repeat
      0.074   13.6   0.4         29    5.3   0.0    3.8  4  TPR_19        Tetratricopeptide repeat
       0.08   13.1   3.4        5.7    7.3   0.0    4.0  4  TPR_2         Tetratricopeptide repeat
          3    8.1   7.6        1.3    9.3   0.1    3.8  4  ANAPC3        Anaphase-promoting complex, cyclosome, subunit 


Domain annotation for each model (and alignments):
>> SRP72  SRP72 RNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.5   4.6   2.4e-14   6.3e-11      16      55 ..     505     544 ..     489     546 .. 0.85

  Alignments for each domain:
  == domain 1  score: 42.5 bits;  conditional E-value: 2.4e-14
       SRP72  16 kgkkkkrkkkrkRkvklPKnydpgvtpDPERWLPrreRSs 55 
                 + +++ +kk rkRk   PKn++p+   DP RWLP+r+R+ 
  EPX71761.1 505 EANNDASKKTRKRKKPTPKNFNPNTVADPQRWLPKRDRTN 544
                 3344458999****************************95 PP

>> SRP_TPR_like  Putative TPR-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   1.9   9.3e-11   2.4e-07      13     117 .]      22     125 ..       4     125 .. 0.84
   2 ?   -2.0   0.0       1.4   3.6e+03      55      71 ..     150     166 ..     134     189 .. 0.55
   3 ?   -1.4   0.1      0.89   2.3e+03      25      41 ..     338     354 ..     329     367 .. 0.69

  Alignments for each domain:
  == domain 1  score: 30.8 bits;  conditional E-value: 9.3e-11
  SRP_TPR_like  13 gkelkkf.kvvaliklekyeeaLkllkkgsalsedvrfEkaYvlYklkkykkalkilkkveaeekvkvlksqvlYrlgsyekA...YklL..skekk 103
                   +++l+ + kv++li +e y eaL +++k     ed  +E+ Y  ++lk+          +++++ v++l++q +Yr+ ++ kA   Y+ L  +  ++
    EPX71761.1  22 DSKLDIYrKVLSLIDVECYVEALDIIEKYL-GKEDAVYERVYCKFHLKQDYP------PITDVHFVQHLEAQEAYRKSDFCKAlenYEKLfeRLPEQ 111
                   4556666689******************98.7899************98543......345555789****************99999997666678 PP

  SRP_TPR_like 104 edelvvNllAvdsl 117
                     +++vN+lAv+s+
    EPX71761.1 112 RSDIQVNVLAVASQ 125
                   89*********985 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 1.4
  SRP_TPR_like  55 lYklkkykkalkilkkv 71 
                   +  l++++ka  +l+++
    EPX71761.1 150 YLTLQQWNKAIDLLSSL 166
                   34444444544444443 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 0.89
  SRP_TPR_like  25 iklekyeeaLkllkkgs 41 
                   i+ e y+ aL + kk+ 
    EPX71761.1 338 ISNENYRGALAVYKKMC 354
                   55677788887777765 PP

>> bZIP_2  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   3.4   5.4e-05      0.14       7      24 ..     502     519 ..     501     521 .. 0.94

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 5.4e-05
                 XXXXXXXXXXXX-HHHHH CS
      bZIP_2   7 erRrkNreAarrsRekkk 24 
                  +R+ N+ A++++R++kk
  EPX71761.1 502 LKREANNDASKKTRKRKK 519
                 69***************9 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1       1.1   2.9e+03      18      31 ..      96     109 ..      84     110 .. 0.67
   2 ?   10.9   0.0   0.00022      0.57       1      29 [.     141     169 ..     141     170 .. 0.93

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 1.1
                 HHHHHHHHHHHH-T CS
       TPR_6  18 kAlealerlikeYP 31 
                 kAle +e+l ++ P
  EPX71761.1  96 KALENYEKLFERLP 109
                 89999999987766 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00022
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   1 dAlyklalsyrklgdtdkAlealerlike 29 
                 d+l++la  y+ l+++ kA+++l +li++
  EPX71761.1 141 DSLFNLATRYLTLQQWNKAIDLLSSLISN 169
                 78*********977************986 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       2.5   6.3e+03       9      24 ..      96     111 ..      88     121 .. 0.71
   2 ?    5.3   0.0     0.011        29      24      52 ..     139     167 ..     132     174 .. 0.86
   3 ?    2.0   0.0      0.12     3e+02      28      52 ..     188     212 ..     176     221 .. 0.83
   4 ?    1.0   0.0      0.24     6e+02       3      23 ..     339     362 ..     337     380 .. 0.69

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 2.5
      TPR_19   9 eAlalleqalqedpkn 24 
                  Al+ +e++++  p++
  EPX71761.1  96 KALENYEKLFERLPEQ 111
                 6888888888777763 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.011
      TPR_19  24 naearllLAeallalgqldeAealLdalp 52 
                 +++ + +LA  +l l q+++A++lL+ l 
  EPX71761.1 139 DQDSLFNLATRYLTLQQWNKAIDLLSSLI 167
                 56677789999**************9875 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.12
      TPR_19  28 rllLAeallalgqldeAealLdalp 52 
                 rl+L+ a++ +g+  +Ae+  ++l 
  EPX71761.1 188 RLQLVYAHMMAGEMPKAEEESKKLA 212
                 899***************9877665 PP

  == domain 4  score: 1.0 bits;  conditional E-value: 0.24
      TPR_19   3 aegdyaeAlalleq...alqedpk 23 
                  +++y  Ala +++   al+ + +
  EPX71761.1 339 SNENYRGALAVYKKmceALEVSKD 362
                 5789**********5555555444 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       3.6   9.2e+03      22      30 ..      38      46 ..      37      49 .. 0.78
   2 ?    2.7   0.3     0.067   1.7e+02       5      32 ..      82     109 ..      79     111 .. 0.81
   3 ?    7.3   0.0    0.0022       5.7       3      24 ..     142     163 ..     140     170 .. 0.89
   4 ?    0.0   0.0      0.47   1.2e+03      14      28 ..     340     354 ..     338     356 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 3.6
       TPR_2 22 eafekAlel 30
                e++ +Al +
  EPX71761.1 38 ECYVEALDI 46
                799999976 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.067
       TPR_2   5 ynlGlayyklgdyeeAleafekAleldP 32 
                 +  ++ +y++ d+ +Ale +ek  e  P
  EPX71761.1  82 HLEAQEAYRKSDFCKALENYEKLFERLP 109
                 566788888889999******9988777 PP

  == domain 3  score: 7.3 bits;  conditional E-value: 0.0022
       TPR_2   3 alynlGlayyklgdyeeAleaf 24 
                  l+nl+  y+ l+++++A++++
  EPX71761.1 142 SLFNLATRYLTLQQWNKAIDLL 163
                 69*****************987 PP

  == domain 4  score: 0.0 bits;  conditional E-value: 0.47
       TPR_2  14 lgdyeeAleafekAl 28 
                 + +y  Al+ ++k  
  EPX71761.1 340 NENYRGALAVYKKMC 354
                 579********9965 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.58   1.5e+03      64      82 .]      32      50 ..      20      50 .. 0.83
   2 ?    9.3   0.1    0.0005       1.3      19      51 ..     136     168 ..      91     177 .. 0.77
   3 ?   -0.1   0.1      0.45   1.1e+03       2      17 ..     340     355 ..     313     368 .. 0.61
   4 ?   -3.3   0.1       4.4   1.1e+04      41      69 ..     396     420 ..     389     424 .. 0.63

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.58
                HHHHHTT-HHHHHHHH-SS CS
      ANAPC3 64 qcllkLkkyeeAiaaLekl 82
                 +l++ + y eA++++ek+
  EPX71761.1 32 LSLIDVECYVEALDIIEKY 50
                67899999*******9986 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.0005
                 HH--HHHHHHHHHHHHHTT-HHHHHHHHHCTSH CS
      ANAPC3  19 etespedayllAlclylngqykrAyellrkakl 51 
                 + e+ ++++ lA  ++ ++q+++A++ll+++ +
  EPX71761.1 136 SLEDQDSLFNLATRYLTLQQWNKAIDLLSSLIS 168
                 56788999********************99833 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.45
                 TT-HHHHHHHHHHHH. CS
      ANAPC3   2 qnnyknAiflaerlla 17 
                 ++ny+ A+ ++ ++++
  EPX71761.1 340 NENYRGALAVYKKMCE 355
                 4455555555555553 PP

  == domain 4  score: -3.3 bits;  conditional E-value: 4.4
                 HHHHHHHCTSHHHC-HHHHHHHHHHHHHT CS
      ANAPC3  41 rAyellrkaklnskslgcrylfAqcllkL 69 
                  A ++++k     + ++ ++l+ ++ll+L
  EPX71761.1 396 AARYWTDKP----NCHAKLLLCTRSLLAL 420
                 445555555....6666677777777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (559 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       673  (0.037537); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 4165.57
//
Query:       EPX71762.1  [L=410]
Description: ferrochelatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      1e-96  323.7   0.0    1.2e-96  323.5   0.0    1.0  1  Ferrochelatase  Ferrochelatase


Domain annotation for each model (and alignments):
>> Ferrochelatase  Ferrochelatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  323.5   0.0  6.8e-101   1.2e-96       2     315 ..      59     376 ..      58     378 .. 0.97

  Alignments for each domain:
  == domain 1  score: 323.5 bits;  conditional E-value: 6.8e-101
                     EEEEEEE----SSCCCHHHHHHHHCT-TTTS-S-TTTHHHHHHHHHHHHHHHHHHHHHHTTSS-SHHHHHHHHHHHHHHHHHHH-...--EEEEE CS
  Ferrochelatase   2 tavLLlnlGgPekpedvrpflenllsdrrvielplllqkllaklilkerlekvaekYekigggSPlneitrkqaealekelaerg...idvkvyl 93 
                     ta+++ln+GgP+++++v pfle+l+ d ++i+l   +q++l+k+i+k+r++ v+ +Y+ igggSP++++t+ q ++++k l++++   +++  ++
      EPX71762.1  59 TAIVMLNMGGPSNLDEVGPFLERLFADGDIIPLG-YFQNFLGKFIAKRRTPVVRDHYKDIGGGSPILHWTEYQGKEICKILDKTSphsAPHVPFV 152
                     79******************************99.************************************************99*999****** PP

                     EESSSSSBHHHHHHHHHCTT-SEEEEEES-SS--TTTHHHHHHHHHHHHHH..TT-SSEEEEE---TT-HHHHHHHHHHHHHHHTTS-.HC...C CS
  Ferrochelatase  94 amrywePsiedaleelkadgvervvvlplyPqysasttgssleeleralkk..kreapevrvirqfydhpgyiealaesikealeelp.eek..k 183
                     a+ry +P++e++l++lk+ +++r+v++++yPq s+st+g+sl+el+++l +  +++ ++++v+++++ ++g++ a++e+i+++le++p e +  +
      EPX71762.1 153 AFRYAPPLTEEMLKDLKDSKIKRAVAFSQYPQWSCSTSGASLNELRKQLLEmnMEHDIDWSVLDRWPLQEGLLTAFSENIQKTLETYPeE-EreN 246
                     *************************************************7667999*******************************962.4458 PP

                     -EEEEEEE--BHHHHT.TT-SHHHHHHHHHHHHHHHTTT-S-EEEEEE---SSS-BSSSBHHHHHHHHCCC.-S-EEEE-TT-SS--HHHHIIII CS
  Ferrochelatase 184 akllfsaHglPeravkkkgdpYqqqveetarlvaealglkeevelayqSrvGpeeWlePdtddtleelaekgvkaivvvpigFvsDhlEtleeld 278
                     + ++fsaH+lP+++v  kgdpY ++v +t+  ++e+lg+k+++  ++qS+vGp +W++P+t+d+++++ ++g+k++++vp++F+sDh+Etl el 
      EPX71762.1 247 VIIIFSAHSLPMSQV-SKGDPYVNEVAATTYGIMEKLGFKNKFINSWQSKVGPIPWMSPSTEDVIDQFGKQGHKNMILVPVAFTSDHIETLKEL- 339
                     9**************.67****************************************************************************. PP

                     IIIITTSTT..CCCEEE----TT-HHHHHHHHHHHHH CS
  Ferrochelatase 279 iearelaeeaggekfvrvptlndspafiealadlvee 315
                     + + e a+++g++ ++r+p++nd++  i+++ad v+ 
      EPX71762.1 340 EDYIEDAKKKGITGVKRAPSINDNAVAIKGMADEVKL 376
                     8999*****************************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (410 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       761  (0.0424452); expected 358.6 (0.02)
Passed bias filter:                      650  (0.0362541); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.22s 00:00:00.74 Elapsed: 00:00:00.38
# Mc/sec: 3221.32
//
Query:       EPX71763.1  [L=521]
Description: membrane transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   8.3e-119  396.5  27.7     1e-118  396.3  27.7    1.0  1  SLC35F    Solute carrier family 35
    1.9e-08   34.6  34.0    1.3e-05   25.3  13.4    2.4  2  EamA      EamA-like transporter family
      2e-08   33.6   7.5      2e-08   33.6   7.5    1.8  2  CRT-like  CRT-like, chloroquine-resistance transporter-like
     0.0068   15.8   3.5     0.0068   15.8   3.5    2.2  2  TPT       Triose-phosphate Transporter family


Domain annotation for each model (and alignments):
>> SLC35F  Solute carrier family 35
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  396.3  27.7  2.2e-122    1e-118       2     298 ..     148     444 ..     147     445 .. 0.99

  Alignments for each domain:
  == domain 1  score: 396.3 bits;  conditional E-value: 2.2e-122
      SLC35F   2 tkkllislalGqvlsllitataltskylaekkinaPvlqtflnyvllalvytgillfrrgaeklleilkrkwykylllalvdveanylvvkayqytslt 100
                 +k+++i++ lGqvlsl++ta ++++  l+e   ++P++q fl y+ l++vyt+++++r+g++++++++ ++++ky+++a++dve+ny+vv ayqyts++
  EPX71763.1 148 NKRFWIVFILGQVLSLCLTASNTFNGFLSEM-GKVPAFQIFLFYAALTIVYTPYTIYRMGFKDYFKMVLQHGWKYIIFAFFDVEGNYFVVLAYQYTSVI 245
                 89****************************9.789**************************************************************** PP

      SLC35F 101 svqlldcfaipvvlvlswlflkvryrlvkiigvvvcilGvvllvvsdvla.grransgsnpvlGdllvlaGatlyavsnvleeylvkklslvellgllg 198
                 s++lld++a+++v++ls+lflkvry++++++g+vvci G++llvvsd+   g++++s++np lGd ++++Gat+y++sn++ee++++kl+l++++g+l+
  EPX71763.1 246 SASLLDSWATVAVVILSFLFLKVRYHWTQLLGIVVCIGGLALLVVSDLKNyGSNEKSAVNPGLGDGYMILGATCYGLSNTIEEFFASKLPLYVVVGQLS 344
                 ************************************************8549999******************************************** PP

      SLC35F 199 lfGaiisaiqlailerkelkaihWdaeiallfvgfalvlfllysllpilikktsatsvnlslltsdlyslliglflfhykvswlyllafvviliGlily 297
                 l+ +iis++q +i++r++   +hW+  ++ +++gf++v+++lysl+pi ++++sat++n+s+ltsd++sl+ig+++f+++v+wly++afv+i+iGl+ly
  EPX71763.1 345 LYASIISIVQNFIFDRHDFLHLHWTRSMGGYLAGFIIVMLILYSLAPICFRMSSATFYNISVLTSDFWSLIIGIHVFGNHVYWLYPIAFVMIIIGLFLY 443
                 *************************************************************************************************** PP

      SLC35F 298 s 298
                 +
  EPX71763.1 444 H 444
                 8 PP

>> EamA  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3  13.4     3e-09   1.3e-05      32     136 ..     186     289 ..     153     290 .. 0.70
   2 !   15.2  12.4   4.1e-06     0.019       3     134 ..     309     442 ..     307     445 .. 0.89

  Alignments for each domain:
  == domain 1  score: 25.3 bits;  conditional E-value: 3e-09
        EamA  32 tltfvrfliagillliiallkegkl...aklslkdwllllllgllgtvlafllffyalkktsasnaslitslePvftlilsvlllgekltlkqllgivl 127
                  ++f+  l  +i+  +++ ++ g +   +   + +w++ +++++   v ++++ + a ++ts+  asl+ s + v ++ils+l+l+ +  ++qllgiv+
  EPX71763.1 186 IFLFYAAL--TIVYTPYTIYRMGFKdyfKMVLQHGWKY-IIFAF-FDVEGNYFVVLAYQYTSVISASLLDSWATVAVVILSFLFLKVRYHWTQLLGIVV 280
                 44444443..4444444444444444433344444555.55554.4556778999******************************************** PP

        EamA 128 illGvllil 136
                 ++ G++l++
  EPX71763.1 281 CIGGLALLV 289
                 ******997 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 4.1e-06
        EamA   3 gillallaalfwaiyfvlskillrkvspltltfvrfliagillliiallkegkl.aklslkd.wllllllgllgtvlafllffyalkktsasnaslits 99 
                 g+ +++l+a +++++ ++   + +k++ + +++  +l a+i+ ++  +++++ +   l+++  +  +l   ++ +++ ++l  + ++ +sa++  + ++
  EPX71763.1 309 GDGYMILGATCYGLSNTIEEFFASKLPLYVVVGQLSLYASIISIVQNFIFDRHDfLHLHWTRsMGGYLAGFIIVMLILYSLAPICFRMSSATFYNISVL 407
                 67789***********************************************9984444444234445555578899999999**************** PP

        EamA 100 lePvftlilsvlllgekltlkqllgivlillGvll 134
                 ++  ++li+++ ++g ++ ++  +++v+i++G++l
  EPX71763.1 408 TSDFWSLIIGIHVFGNHVYWLYPIAFVMIIIGLFL 442
                 *********************************98 PP

>> CRT-like  CRT-like, chloroquine-resistance transporter-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.6   7.5   4.4e-12     2e-08      64     152 ..     214     302 ..     160     359 .. 0.73
   2 ?   -3.6   1.2      0.94   4.2e+03      16      40 ..     391     415 ..     371     443 .. 0.53

  Alignments for each domain:
  == domain 1  score: 33.6 bits;  conditional E-value: 4.4e-12
    CRT-like  64 rsfpkrkFaimgaLDavsgilvvigavstsGslqvllnqaiipitllasllllkerysliqylGAlviilgvvvvlipsllgessegnk 152
                      +k++i ++ D  + ++vv++  +ts    +ll   +++  +++s+l+lk ry+++q+lG +v i+g+++++ ++l    s++++
  EPX71763.1 214 VLQHGWKYIIFAFFDVEGNYFVVLAYQYTSVISASLLDSWATVAVVILSFLFLKVRYHWTQLLGIVVCIGGLALLVVSDLKNYGSNEKS 302
                 3334689******************************************************************9999999875555443 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 0.94
    CRT-like  16 sillKkvlnklkNysfflnqltnfv 40 
                  i+++    +++N s++++ + + +
  EPX71763.1 391 PICFRMSSATFYNISVLTSDFWSLI 415
                 4444444555555555554444433 PP

>> TPT  Triose-phosphate Transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   3.5   1.5e-06    0.0068      39     140 ..     191     293 ..     154     305 .. 0.83
   2 ?    2.8   2.2     0.014        63     258     289 ..     412     443 ..     322     444 .. 0.62

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1.5e-06
         TPT  39 llvgsvlil.vlwalglkkrpkisseflkailplalvktlghvlavvslskvaVSfthtvKasePiFtvilsrlllgeklsllvylsLlpivgGvalas 136
                  + ++v++   ++++g+k++ k+  +  ++ ++ a++ + g+ + v++ + ++V  +  + + + +  vils l+l+ +++ + +l +++ +gG+al  
  EPX71763.1 191 AALTIVYTPyTIYRMGFKDYFKMVLQHGWKYIIFAFFDVEGNYFVVLAYQYTSVISASLLDSWATVAVVILSFLFLKVRYHWTQLLGIVVCIGGLALLV 289
                 3344444431467889**********99999999**************************************************************988 PP

         TPT 137 vtEl 140
                 v +l
  EPX71763.1 290 VSDL 293
                 7765 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.014
         TPT 258 vvIvlsvlvfknpvsllnaiGtavaivGvflY 289
                  ++++ + vf+n+v +l  i  ++ i+G flY
  EPX71763.1 412 WSLIIGIHVFGNHVYWLYPIAFVMIIIGLFLY 443
                 33455667889999999999999999999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (521 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1058  (0.0590105); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.64u 0.27s 00:00:00.91 Elapsed: 00:00:00.42
# Mc/sec: 3731.36
//
Query:       EPX71764.1  [L=297]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0083   16.5   0.1      0.017   15.5   0.1    1.6  1  R3H-assoc  R3H-associated N-terminal domain


Domain annotation for each model (and alignments):
>> R3H-assoc  R3H-associated N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.1   9.7e-07     0.017       6      41 ..      72     104 ..      67     140 .. 0.74

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 9.7e-07
   R3H-assoc   6 rdsafrreallkgkeGsRrrrRweNdrlLkeLlerl 41 
                 +++ +rr +++ ++ GsR+r+R++Nd  L     + 
  EPX71764.1  72 QNQHRRRPNYSTHHVGSRKRNRLLNDLHLFR---QT 104
                 6889999*******************86555...22 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (297 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       532  (0.0296726); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 2114.00
//
Query:       EPX71765.1  [L=763]
Description: RNA-binding protein Mde7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.7e-16   59.8   0.0    1.1e-09   37.9   0.0    2.4  2  RRM_1          RNA recognition motif. (a.k.a. RRM, RBD, or RN
  ------ inclusion threshold ------
       0.19   11.9   0.0        0.3   11.3   0.0    1.3  1  Metallophos_2  Calcineurin-like phosphoesterase superfamily d


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   6.8e-08   0.00061       4      65 ..     237     295 ..     235     300 .. 0.90
   2 !   37.9   0.0   1.2e-13   1.1e-09       1      67 [.     613     676 ..     613     677 .. 0.96

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 6.8e-08
                 ESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEET CS
       RRM_1   4 gnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklg 65 
                  +Lp d++ +e + +F  +++++  ++v +   + ++ ++V+F+++ +A+kA++ l +   +
  EPX71765.1 237 DGLPDDIDSREFSGIFTFCEGYTQSRVVIE---SGHRKGIVTFNNPNAATKAKQMLMNSPTN 295
                 58***************************7...999******************98776655 PP

  == domain 2  score: 37.9 bits;  conditional E-value: 1.2e-13
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggr 67 
                 ++Vgn++ +  e+eL++lFs   ++++++   +    s++++fVeFe  + A++Al++l+g  l+++
  EPX71765.1 613 IYVGNISGYDQEKELRKLFSTQPGYRRLSFKIK---GSNPMCFVEFEEISYATQALNKLQGAILRNS 676
                 8*******************************7...*************************999885 PP

>> Metallophos_2  Calcineurin-like phosphoesterase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   3.4e-05       0.3      74     152 ..     252     329 ..     216     338 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 3.4e-05
  Metallophos_2  74 aaelgtdlpeeaelelagek.vlliHgdplgvkdalaellkeaeegsdvvvcGHtHvpevekeggvlvvnPGsvgeprdg 152
                    +++++++ +++ ++e + +k +  +    ++++ + +++l  +  + + +v G  H++   +++++l vnP s+++  + 
     EPX71765.1 252 FTFCEGYTQSRVVIESGHRKgIVTFNN--PNAATKAKQMLMNSPTNTFTIVQGNLHIADNLQQRQTLSVNPISMQMNKKV 329
                    444444444555555444442222222..2777777777777455555**************************998554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (763 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       359  (0.0200234); expected 358.6 (0.02)
Passed bias filter:                      222  (0.0123822); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.29s 00:00:00.86 Elapsed: 00:00:00.44
# Mc/sec: 5158.16
//
Query:       EPX71766.1  [L=664]
Description: sulfate transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.8e-68  231.1  23.2    2.5e-68  230.6  23.2    1.2  1  Sulfate_transp  Sulfate permease family
    9.1e-21   73.7   0.1    2.4e-20   72.3   0.0    1.7  2  STAS            STAS domain
    1.8e-05   25.1   5.2    1.8e-05   25.1   5.2    3.4  3  MFS_MOT1        Molybdate transporter of MFS superfamily
  ------ inclusion threshold ------
       0.13   12.1   1.8       0.15   11.9   0.4    1.8  2  DUF2448         Protein of unknown function C-terminus (DUF24
        5.4    7.2   9.4        1.7    8.8   4.5    2.7  2  DUF4229         Protein of unknown function (DUF4229)


Domain annotation for each model (and alignments):
>> Sulfate_transp  Sulfate permease family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  230.6  23.2     7e-72   2.5e-68       3     377 ..      75     463 ..      73     466 .. 0.89

  Alignments for each domain:
  == domain 1  score: 230.6 bits;  conditional E-value: 7e-72
  Sulfate_transp   3 gDliaGitvallaiPqalayal.laglppiygLyssvvpqlvyalfGtsrqlavGpvavlslivgeiiakv..aeee....pekgieiattltll 90 
                      D++aG ++a+l+iP al+y++   g+pp+y L ++ v++++y+lf  s+ l+vGp+a ++l+++  i +      +    ++ +i i  ++t+l
      EPX71766.1  75 WDVLAGCSTACLSIPVALSYSQtFLGIPPVYSLMGATVSPILYSLFTASPLLSVGPEAGVCLLIAGNIHQRviE--NteapEKMAILITGMITFL 167
                     69********************999***********************************99887766655342..2244466677777789*** PP

  Sulfate_transp  91 aGviqvllGllRLgflveflseavlsGfiaGaaivillsqikvllglervs..kkeslvsvlsslftnlekvnlakvvlgllllvvLlvtkellk 183
                     +G++ +l+G++RLgfl  ++s  +l+G+i +++++i+++q +v++gl++++  k+   ++ l+ +++n+++ +  +++++++ +v+ +v++  ++
      EPX71766.1 168 TGLFTLLAGTFRLGFLDALVSPVLLRGCILSISVIIMINQASVIFGLTHIQpiKSDLPIEKLIFILRNIPNSHKFTCAISMIGIVLFTVSRLGKT 262
                     ************************************************7662155557999**********999999999999988888888888 PP

  Sulfate_transp 184 klkkl..lvipapaelvavivatlvsaifelkreagvkivgeipsg..lpelslp.kvdwsllsallpdalaialvglleaiavsksldkkkgyk 273
                     ++ ++    +++p  +++++va l+s  f+ ++ +gv i+g++++   +p+l lp   +++ +s+ l + l++a++ +++++ + k+l + +++ 
      EPX71766.1 263 RFSSRfpRIVSIPDTVLILLVAALLSKWFHWHSVHGVPILGDVETKviYPKLPLPkVSKVNFISESLQTGLTCAFLSFIDTVIAIKALSTQRNQI 357
                     888886667889999999999********9***************96666666664446788********************************* PP

  Sulfate_transp 274 vdsnkELvAlGfsNilsslfgglpatgafsrsavnikaGaktqlsglvsalvvllvllvltplleyiPkavLaaiiivagkglLvel.kelkklw 367
                     + sn+EL+ lG++Ni +slf+glp+ g++ rs  ni +G++tq+s +  +++v+l+ l++ p+++++P++ Laa++++++++lL+++ +e+++l 
      EPX71766.1 358 IRSNRELFSLGMANIGGSLFSGLPVCGGYLRSKCNILSGGRTQVSAIACGVIVFLATLYILPVFSHVPNCLLAAMVVSLALSLLTDVtSEIVSLV 452
                     **************************************************************************************834678888 PP

  Sulfate_transp 368 k.lskldflil 377
                     k    +++li+
      EPX71766.1 453 KlRAFYEILII 463
                     83345566665 PP

>> STAS  STAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       1.2   4.2e+03      54      83 ..     334     364 ..     333     365 .. 0.73
   2 !   72.3   0.0   6.7e-24   2.4e-20       2     113 ..     530     649 ..     529     653 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 1.2
                 EEEEEEEE-HH.HHHHHHHHHHHHHHTT-EE CS
        STAS  54 dlsavsfiDss.GvraLkeilkelkrigvev 83 
                  +  +sfiD++ +++aL   ++++ r + e+
  EPX71766.1 334 TCAFLSFIDTViAIKALSTQRNQIIRSNREL 364
                 5777899998647788888888888777665 PP

  == domain 2  score: 72.3 bits;  conditional E-value: 6.7e-24
                 EEEEECTTEEEEEEEEEESHHHHHHHHHHHHHHHHCCC...............-SEEEEEEEEEEEE-HHHHHHHHHHHHHHHHTT-EEEEES--HHHH CS
        STAS   2 idaeeiegililrldgpidfanaesfkeklkravgeeperve.......kkeslkslildlsavsfiDssGvraLkeilkelkrigvevvlvnikpevr 93 
                 +da ++ ++l++r+++p++fan+++++++l+r +++++ r++         e+l+ +++d+ +vs +Dss++ ++ +il+++++ + +++lv+++p++ 
  EPX71766.1 530 VDADDHMRVLVVRIPEPLFFANVSQLEDRLSRLEKYGNPRMHpgetpyhCVEDLEIVVFDMVGVSSMDSSALFTFGRILERYRNYKTNIYLVSVDPSIL 628
                 57888899**************************************999999*********************************************** PP

                 HHHHHTTCGGCC...SEEESS CS
        STAS  94 eklektgffdeve.eeklflt 113
                 + +ek g+ ++++  ++++++
  EPX71766.1 629 QIFEKHGLIEIIGgFNHVYDS 649
                 ************655555555 PP

>> MFS_MOT1  Molybdate transporter of MFS superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   1.9     0.068   2.4e+02      64      94 ..     148     180 ..      79     203 .. 0.67
   2 ?   -0.5   0.1      0.43   1.6e+03      68     105 ..     242     282 ..     234     287 .. 0.64
   3 !   25.1   5.2     5e-09   1.8e-05      13     111 .]     339     440 ..     330     440 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.068
    MFS_MOT1  64 f..gartgaagillGlvllllgltgllerllrl 94 
                 +  +a   +a++++G++ +l gl+ ll    rl
  EPX71766.1 148 EntEAPEKMAILITGMITFLTGLFTLLAGTFRL 180
                 255666667899999999999999866554443 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.43
    MFS_MOT1  68 tgaagillGlvllllgltg...llerllrliPksvlgglll 105
                  + a+ ++G+vl++++ +g     +r+ r++  +    +ll
  EPX71766.1 242 FTCAISMIGIVLFTVSRLGktrFSSRFPRIVSIPDTVLILL 282
                 56788999999999888875556666666643333333444 PP

  == domain 3  score: 25.1 bits;  conditional E-value: 5e-09
    MFS_MOT1  13 Tllnlvialaala.....slsltalllsvGlmnlltglfggvPmchgAgglaaqyrf..gartgaagillGlvllllgltgllerllrliPksvlggll 104
                  ++  via+ al+      +  ++ l+s+G++n+ ++lf g+P+c  +g+l ++ +   g rt +++i  G++++l +l   +  + +++P+ +l +++
  EPX71766.1 339 SFIDTVIAIKALStqrnqIIRSNRELFSLGMANIGGSLFSGLPVC--GGYLRSKCNIlsGGRTQVSAIACGVIVFLATLY--ILPVFSHVPNCLLAAMV 433
                 5778889998888888876779999********************..667777755577*************99987766..799************** PP

    MFS_MOT1 105 lgaGleL 111
                 + ++l+L
  EPX71766.1 434 VSLALSL 440
                 ****998 PP

>> DUF2448  Protein of unknown function C-terminus (DUF2448)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.4   4.2e-05      0.15     110     146 ..     152     190 ..     137     210 .. 0.80
   2 ?   -3.8   0.0       2.7   9.8e+03     178     198 ..     334     354 ..     328     359 .. 0.62

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 4.2e-05
     DUF2448 110 kdhqlavvsvGLltCllavl..laGriRLRRiDalasvl 146
                   +++a+   G++t l++++  laG  RL  +Dal s +
  EPX71766.1 152 APEKMAILITGMITFLTGLFtlLAGTFRLGFLDALVSPV 190
                 5689*************985449***********98843 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 2.7
     DUF2448 178 lcClvgfaaavatrkatgqRR 198
                  c  ++f  +v   ka+++ R
  EPX71766.1 334 TCAFLSFIDTVIAIKALSTQR 354
                 355667777777777766665 PP

>> DUF4229  Protein of unknown function (DUF4229)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.2      0.65   2.3e+03      36      46 ..     278     288 ..     248     291 .. 0.58
   2 ?    8.8   4.5   0.00048       1.7       9      48 ..     400     441 ..     395     442 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.65
     DUF4229  36 llAlvvalplS 46 
                 +l l+va++lS
  EPX71766.1 278 VLILLVAALLS 288
                 33344555554 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00048
     DUF4229   9 aLfvvltavillvarliglp..vpllvaallAlvvalplSmv 48 
                  + +++++vi+++a l  lp  +++   +l A+vv+l+lS++
  EPX71766.1 400 QVSAIACGVIVFLATLYILPvfSHVPNCLLAAMVVSLALSLL 441
                 56688999************98888889999*********87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (664 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       864  (0.0481901); expected 358.6 (0.02)
Passed bias filter:                      485  (0.0270511); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.65u 0.27s 00:00:00.92 Elapsed: 00:00:00.43
# Mc/sec: 4592.87
//
Query:       EPX71767.1  [L=634]
Description: GTPase Gem1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.3e-28   98.0   0.1      6e-28   96.7   0.0    1.8  1  EF_assoc_2       EF hand associated
    9.2e-26   89.3   0.1    1.9e-25   88.2   0.1    1.5  1  EF_assoc_1       EF hand associated
    1.2e-19   70.4   0.0      9e-10   38.4   0.0    2.3  2  Ras              Ras family
    2.3e-10   40.7   0.0    2.5e-06   27.7   0.0    2.9  2  Roc              Ras of Complex, Roc, domain of DAPkinase
    2.2e-07   31.0   0.0     0.0011   19.0   0.0    2.8  2  MMR_HSR1         50S ribosome-binding GTPase
    6.1e-07   29.5   0.1     0.0068   16.3   0.0    3.1  2  RsgA_GTPase      RsgA GTPase
      9e-07   29.3   1.6      0.033   14.6   0.0    2.7  2  EF-hand_7        EF-hand domain pair
    2.4e-06   27.3   3.5     0.0035   17.2   1.0    2.9  2  EF-hand_8        EF-hand domain pair
    3.8e-06   27.4   0.0      0.022   15.2   0.0    2.4  2  AAA_16           AAA ATPase domain
    4.9e-06   26.9   0.0       0.02   15.1   0.0    2.5  2  AAA_22           AAA domain
    1.6e-05   25.4   0.0       0.13   12.8   0.0    2.5  2  ABC_tran         ABC transporter
    1.8e-05   23.9   3.4      0.071   12.7   1.8    3.1  2  EF-hand_1        EF hand
    2.1e-05   24.5   0.0      0.035   14.0   0.0    2.4  2  NACHT            NACHT domain
    2.3e-05   24.7   0.0       0.88   10.0   0.0    3.6  3  RNA_helicase     RNA helicase
    0.00019   21.0   0.0       0.38   10.3   0.0    2.3  2  AAA_7            P-loop containing dynein motor region
    0.00021   21.3   0.0       0.11   12.3   0.0    2.7  2  ATPase_2         ATPase domain predominantly from Archaea
     0.0009   18.5   0.0      0.034   13.3   0.0    2.2  2  NB-ARC           NB-ARC domain
      0.001   19.1   0.4      0.038   14.0   0.1    2.5  2  Dynamin_N        Dynamin family
     0.0013   18.4   0.1       0.36   10.6   0.0    3.0  3  AAA_29           P-loop containing region of AAA domain
      0.002   17.9   0.0        1.4    8.6   0.0    3.0  3  AAA_24           AAA domain
     0.0021   17.4   0.0       0.33   10.2   0.0    2.3  2  Septin           Septin
     0.0024   18.3   0.0        3.8    7.9   0.0    2.5  2  AAA              ATPase family associated with various cellul
      0.004   16.9   0.0       0.37   10.5   0.0    2.9  3  Viral_helicase1  Viral (Superfamily 1) RNA helicase
     0.0041   16.3   0.0       0.18   10.9   0.0    2.4  2  DUF815           Protein of unknown function (DUF815)
     0.0042   16.9   7.2       0.11   12.5   2.2    3.2  2  EF-hand_6        EF-hand domain
      0.005   16.3   2.3      0.005   16.3   2.3    2.3  2  EF-hand_5        EF hand
     0.0062   16.7   0.0        3.4    7.8   0.0    2.6  2  AAA_33           AAA domain
     0.0074   15.9   0.0          3    7.4   0.0    2.9  3  cobW             CobW/HypB/UreG, nucleotide-binding domain
  ------ inclusion threshold ------
       0.01   15.7   0.3       0.25   11.1   0.0    2.7  3  AAA_21           AAA domain, putative AbiEii toxin, Type IV T
      0.012   14.9   0.0        1.1    8.5   0.0    2.2  2  Zeta_toxin       Zeta toxin
      0.017   15.4   0.5          2    8.7   0.0    2.8  2  AAA_28           AAA domain
      0.017   15.7   0.0       0.44   11.1   0.0    2.5  2  AAA_18           AAA domain
      0.017   14.9   0.2         12    5.6   0.0    3.9  4  ATP_bind_1       Conserved hypothetical ATP binding protein
      0.033   13.7   0.0         24    4.4   0.0    3.6  4  GTP_EFTU         Elongation factor Tu GTP binding domain
      0.038   13.0   0.0        5.7    5.9   0.0    2.7  2  IIGP             Interferon-inducible GTPase (IIGP)
      0.041   14.4   0.6        1.5    9.3   0.0    2.7  2  AAA_23           AAA domain
      0.051   12.4   0.1        2.6    6.7   0.0    2.2  2  Adeno_IVa2       Adenovirus IVa2 protein
       0.06   13.2   0.0        6.3    6.7   0.0    2.4  2  MobB             Molybdopterin guanine dinucleotide synthesis
      0.063   12.7   0.0        5.3    6.4   0.0    2.3  2  SMC_N            RecF/RecN/SMC N terminal domain
       0.09   12.8   0.0         13    5.8   0.0    2.5  2  AAA_14           AAA domain
      0.091   12.3   0.0         34    3.9   0.0    3.2  3  AAA_25           AAA domain
       0.11   12.0   0.0        4.4    6.8   0.1    2.2  2  Hpr_kinase_C     HPr Serine kinase C-terminal domain
       0.11   11.7   0.0       0.43    9.8   0.0    1.8  2  DUF2075          Uncharacterized conserved protein (DUF2075)
       0.12   12.1   0.3        3.3    7.3   0.0    2.6  2  Guanylate_kin    Guanylate kinase
       0.12   11.7   0.0       0.57    9.5   0.0    1.9  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
       0.14   11.9   0.0        3.7    7.2   0.0    2.4  2  IstB_IS21        IstB-like ATP binding protein
       0.16   11.4   0.0        2.8    7.4   0.0    2.7  2  Arf              ADP-ribosylation factor family
       0.17   11.0   0.3        5.5    6.0   0.0    2.5  2  MCM              MCM P-loop domain
       0.18   10.7   0.0        2.9    6.7   0.0    2.2  2  TrwB_AAD_bind    Type IV secretion-system coupling protein DN
       0.19   11.3   0.1         19    4.7   0.0    3.3  4  FeoB_N           Ferrous iron transport protein B
       0.84   10.0   3.8        9.5    6.6   0.1    3.0  3  SPARC_Ca_bdg     Secreted protein acidic and rich in cysteine
        1.5    8.4   9.7        6.5    6.4   3.0    3.1  2  AAA_15           AAA ATPase domain


Domain annotation for each model (and alignments):
>> EF_assoc_2  EF hand associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.7   0.0   1.7e-30     6e-28       1      87 []     219     305 ..     219     305 .. 0.99

  Alignments for each domain:
  == domain 1  score: 96.7 bits;  conditional E-value: 1.7e-30
  EF_assoc_2   1 kpLseeeledikevvskklpegveeegltlkGFlllnklfiekGrhettWtvLrkFgYddsLsLkeeflhPkldvpedssveLspkG 87 
                 k+Ls+ee edi ++v++ +p+gv++ +l+ +GFl++n+l ie+G++e+tW +Lr+F+Y+dsL L++++l Pkl+v++++sveLspkG
  EPX71767.1 219 KQLSKEEAEDIINTVQEVFPNGVTNGQLNRAGFLAYNQLQIENGKQESTWGILRAFHYTDSLCLDDSYLSPKLEVAPGQSVELSPKG 305
                 689**********************************************************************************98 PP

>> EF_assoc_1  EF hand associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.2   0.1   5.5e-28   1.9e-25       1      73 [.     343     413 ..     343     415 .. 0.92

  Alignments for each domain:
  == domain 1  score: 88.2 bits;  conditional E-value: 5.5e-28
  EF_assoc_1   1 WaeaefpsstvtneegavtlqGwLaqWsltTlldvkttleyLaYlGypssslseeettsAlkvtrprkldrkk 73 
                 W +++fp+stv ne+g  +++GwLaqWs++Tl+d+kttl+yLaYlG++s+     + t+Alkvt++r++++++
  EPX71767.1 343 WIHSKFPNSTVLNEHGFASYNGWLAQWSMITLFDYKTTLAYLAYLGFDSEG--RGHVTDALKVTKKRSIQHRR 413
                 999********************************************8544..44689**********99875 PP

>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.4   0.0   2.6e-12     9e-10       1     155 [.       5     161 ..       5     167 .. 0.78
   2 !   29.8   0.0   1.2e-09     4e-07       3     154 ..     425     575 ..     424     582 .. 0.83

  Alignments for each domain:
  == domain 1  score: 38.4 bits;  conditional E-value: 2.6e-12
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEET...TEEEEEEEEEE.TTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievd...gkevkleiwDT.AGqeefkslrelyyrdaegillvyditsresfenvkkwve 95 
                 ++v+ Gd++vGK+sl+   ++++  +  ++ +   f + +i  d   + +v+l + DT  G +e + l+ + +r+a+++ lvy+  ++ s+e+v+ ++ 
  EPX71767.1   5 RVVICGDQGVGKSSLISALIQEDNVTA-IPKV---FPIISIPPDpklNDDVSLVLVDTqSGSNERDYLA-SQLRKANVLCLVYS--DNYSYERVSIFWL 96 
                 589*****************9986665.4555...555555555667889********55777766666.5689*********7..999******7777 PP

                 HHHHHSTTTSEEEEEEETT.TGGG...G-SS-HHHHHHHHHHHT.SEEEEEBTTTTCTHHHHHHH CS
         Ras  96 eikrvaeenvpivLvGnKv.Dlee...kravsteegeelakelg.lkfletSAktnenveeafee 155
                    r    nvpivL++nK+ Dl++    + ++ e +  + + ++    + +SA ++ nv+e+f+ 
  EPX71767.1  97 PYFRSLGINVPIVLCANKSeDLDNyqgLHSIEHEMVPLINEFKEiESCILCSALEKVNVNELFYI 161
                 777777779*********76899955555666666665555555445788************975 PP

  == domain 2  score: 29.8 bits;  conditional E-value: 1.2e-09
                 EEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHH.HHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHHH CS
         Ras   3 vlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslr.elyyrdaegillvyditsresfenvkkwveeikrv 100
                  +vG+ ++GKtsll +f+++  ++ ++  i  +  ++++e+++++  l +    G  + + l+ ++++  ++++ l+yd ++ +sf+ +++++      
  EPX71767.1 425 FVVGSAGCGKTSLLSSFINKIPHRVSDDLI-PNTVVNSVEFQSRQRYLVLSE-IGEKDIDILAePKSLDACDVLCLLYDSSNPNSFSFIANLLGRYPAL 521
                 58******************9999999999.99**********999997765.7999999986257888899999*****************9998777 PP

                 STTTSEEEEEEETTTGGGG-SS-HHHHHHHHHHHTSE...EEEEBTTTTCTHHHHHH CS
         Ras 101 aeenvpivLvGnKvDleekravsteegeelakelglk...fletSAktnenveeafe 154
                  +  +p+v  ++K+Dl+++++    +  e+ k+l+l+   ++ tSA  n+  ++ f 
  EPX71767.1 522 QK--IPCVFAATKADLDRQQQRYPVQPDEFTKQLSLPsptHISTSAIWNTS-KDFFI 575
                 66..9*************998888888888888875322277788766553.44555 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   0.0   7.3e-09   2.5e-06       1     119 [.       5     116 ..       5     117 .. 0.79
   2 !    9.9   0.0    0.0024      0.81       4      25 ..     426     447 ..     424     535 .. 0.81

  Alignments for each domain:
  == domain 1  score: 27.7 bits;  conditional E-value: 7.3e-09
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE.GHHHHCHH.H CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd.srssenlk.e 97 
                 +vv++Gd+gvGK+sl++ +++++  +   + + +  +  +       +     ++v+l + Dt    + r    + lr+a++++lvy  + s+e+++  
  EPX71767.1   5 RVVICGDQGVGKSSLISALIQEDNVTAIPKVFPIISIPPDP------K---LNDDVSLVLVDTQSGSNERDYLASQLRKANVLCLVYSdNYSYERVSiF 94 
                 69******************988777766666554444321......1...224689******988888888888899999999999725577888648 PP

                 HHHHHHHHCSSS-EEEEEE-TT CS
         Roc  98 WlkelkkvagkspvilvgnkiD 119
                 Wl  +++ + + p++l++nk +
  EPX71767.1  95 WLPYFRSLGINVPIVLCANKSE 116
                 ********************75 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.0024
                 EESSTTSSHHHHHHCHCT-CCC CS
         Roc   4 lvGdsgvGKtsllkrfvedkfs 25 
                 +vG +g GKtsll++f+++  +
  EPX71767.1 426 VVGSAGCGKTSLLSSFINKIPH 447
                 89***************87554 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.0   3.2e-06    0.0011       1      84 [.       5      83 ..       5     114 .. 0.62
   2 !    9.2   0.0    0.0036       1.3       3      86 ..     425     503 ..     423     532 .. 0.65

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 3.2e-06
                EEEEEESTTSSHHHHHHHHHTS...TEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHHHHHHHHHH..HHCTSEEEEEEE CS
    MMR_HSR1  1 evaivGrpNvGKStLinaltge...kaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseekglgkafla..leeadlillvvd 84
                +v+i G   vGKS+Li+al++e   +ai + +p   + +  + ++ ++ +++lvDt    +        ++++la  l++a++++lv +
  EPX71767.1  5 RVVICGDQGVGKSSLISALIQEdnvTAIPKVFPIISIPPDPK-LN-DDVSLVLVDTQS-GS-------NERDYLAsqLRKANVLCLVYS 83
                699*****************9875556777777777777777.44.368999999977.22.......233333322335677777665 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.0036
                 EEEESTTSSHHHHHHHHHTS.TEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEETT CS
    MMR_HSR1   3 aivGrpNvGKStLinaltge.kaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseekglgkaflaleeadlillvvdas 86 
                  +vG    GK++L+++ +++   +vsd     + +n  +++ + +++ ++   G  e   ++ ++  + ++l+ +d+++l+ d+s
  EPX71767.1 425 FVVGSAGCGKTSLLSSFINKiPHRVSDDLIPNTVVNSVEFQSR-QRYLVLSEIG--E---KDIDILAEPKSLDACDVLCLLYDSS 503
                 69******************76899998877777777777633.4555555556..3...3555666666666677777777744 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0     2e-05    0.0068     101     124 ..       5      28 ..       1      35 [. 0.84
   2 !    9.3   0.0    0.0028      0.97      79     127 ..     400     449 ..     387     453 .. 0.78

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 2e-05
                  EEEEECSTTSSHHHHHHHHCTT-- CS
  RsgA_GTPase 101 tsvlvGqSGvGKStLinallpele 124
                   +v++G  GvGKS+Li al++e++
   EPX71767.1   5 RVVICGDQGVGKSSLISALIQEDN 28 
                  689****************99865 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.0028
                  EEE--TTTHTTHHHHHHHCTT.SEEEEECSTTSSHHHHHHHHCTT----- CS
  RsgA_GTPase  79 vllvsaktkegleelkellkd.ktsvlvGqSGvGKStLinallpelelkt 127
                   l+v +k++ ++++++++ ++  ++++vG+ G GK++L+ +++++   ++
   EPX71767.1 400 ALKVTKKRSIQHRRVSKYDRNvFLCFVVGSAGCGKTSLLSSFINKIPHRV 449
                  5666667777777888888885667789***********99988766665 PP

>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   9.5e-05     0.033       4      53 ..     189     233 ..     187     256 .. 0.85
   2 !   12.9   0.3   0.00034      0.12       6      29 ..     311     334 ..     308     342 .. 0.91

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 9.5e-05
   EF-hand_7   4 lkeaFkelDtdgdgyldkeellrllrkifqgagegsklsdeelellfkef 53 
                 l ++F + D+++d  l+ eel +l +k     + g+ ls+ee e++++ +
  EPX71767.1 189 LSRIFFLSDKNNDDLLSTEELAHLSEK-----CFGKQLSKEEAEDIINTV 233
                 6689**********************9.....99********99999875 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 0.00034
   EF-hand_7   6 eaFkelDtdgdgyldkeellrllr 29 
                 + F ++D+d+dg l+ +el +l+r
  EPX71767.1 311 DLFYQFDRDNDGALNDDELSDLFR 334
                 679*****************9998 PP

>> EF-hand_8  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.1    0.0031       1.1       2      34 ..     201     232 ..     187     234 .. 0.95
   2 !   17.2   1.0     1e-05    0.0035      30      52 ..     311     333 ..     309     334 .. 0.91

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.0031
   EF-hand_8   2 kgkItreelrril.rilglkkglseeevdilfre 34 
                 ++ +++eel + + + +g++  ls+ee+++++++
  EPX71767.1 201 DDLLSTEELAHLSeKCFGKQ--LSKEEAEDIINT 232
                 6889****************..*********996 PP

  == domain 2  score: 17.2 bits;  conditional E-value: 1e-05
   EF-hand_8  30 ilfrefDtdgdGkisfeEFcvll 52 
                 +lf+ fD+d+dG+++ +E  +l+
  EPX71767.1 311 DLFYQFDRDNDGALNDDELSDLF 333
                 79****************99887 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.6   0.0    0.0032       1.1      27      46 ..       6      25 ..       2      44 .. 0.86
   2 !   15.2   0.0   6.3e-05     0.022      26      61 ..     423     465 ..     394     496 .. 0.75

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.0032
      AAA_16 27 vllsGesGvGKsslvrellr 46
                v++ G++GvGKssl+ +l +
  EPX71767.1  6 VVICGDQGVGKSSLISALIQ 25
                7899***********88865 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 6.3e-05
      AAA_16  26 lvllsGesGvGKsslvrellralekd.......ggiflrgkcd 61 
                 l++++G +G+GK+sl+ ++ + +  +       + ++ + +++
  EPX71767.1 423 LCFVVGSAGCGKTSLLSSFINKIPHRvsddlipNTVVNSVEFQ 465
                 689*************999998887755555554444444444 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   5.9e-05      0.02       9      61 ..       7      72 ..       5      85 .. 0.83
   2 !    8.8   0.0    0.0052       1.8       8      31 ..     424     447 ..     421     495 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 5.9e-05
      AAA_22  9 vvtGesGtGKTtllrrlleqldeeakaee..............erpevvfvtlpsstsskdllrell 61
                v++G  G+GK+ l+  l ++++ + ++ +               ++++v+v+ +s+++ +d l   l
  EPX71767.1  7 VICGDQGVGKSSLISALIQEDN-VTAIPKvfpiisippdpklnDDVSLVLVDTQSGSNERDYLASQL 72
                8******************975.55555569999999999999999999999999998888765544 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.0052
      AAA_22   8 lvvtGesGtGKTtllrrlleqlde 31 
                 ++v+G +G+GKT ll  + ++ + 
  EPX71767.1 424 CFVVGSAGCGKTSLLSSFINKIPH 447
                 689**************9998764 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.0   0.00037      0.13      13      36 ..       5      28 ..       2      31 .. 0.88
   2 !    9.7   0.0    0.0033       1.2      15      36 ..     425     446 ..     422     478 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 0.00037
                EEEEEESTTSSHHHHHHHHTTSS- CS
                xxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 13 kvaivGenGaGKStLlkllagllk 36
                +v+i G+ G GKS+L+++l+++ +
  EPX71767.1  5 RVVICGDQGVGKSSLISALIQEDN 28
                799****************99876 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.0033
                 EEEESTTSSHHHHHHHHTTSS- CS
                 xxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  15 aivGenGaGKStLlkllagllk 36 
                  +vG+ G+GK++Ll+ ++++  
  EPX71767.1 425 FVVGSAGCGKTSLLSSFINKIP 446
                 589***********99987765 PP

>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0    0.0021      0.72       3      25 ..     190     212 ..     188     216 .. 0.87
   2 !   12.7   1.8   0.00021     0.071       4      27 ..     311     334 ..     308     334 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0021
                 HHHHHHHTTTSSSEEEHHHHHHH CS
   EF-hand_1   3 keiFrefDkDgdGkIdfeEfkel 25 
                  +iF + Dk++d  ++ eE+ +l
  EPX71767.1 190 SRIFFLSDKNNDDLLSTEELAHL 212
                 689999**************987 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 0.00021
                 HHHHHHTTTSSSEEEHHHHHHHHH CS
   EF-hand_1   4 eiFrefDkDgdGkIdfeEfkellk 27 
                 ++F  fD+D+dG ++ +E+ +l++
  EPX71767.1 311 DLFYQFDRDNDGALNDDELSDLFR 334
                 67889**************99875 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.0    0.0069       2.4       3      23 ..       6      26 ..       4      39 .. 0.86
   2 !   14.0   0.0    0.0001     0.035       3      27 ..     424     448 ..     422     470 .. 0.88

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0069
                EEEEC-TTTCHHHHHHHHHHH CS
       NACHT  3 vilqGeaGsGKTtLlqklala 23
                v++ G++G+GK+ L+  l+++
  EPX71767.1  6 VVICGDQGVGKSSLISALIQE 26
                899*************99986 PP

  == domain 2  score: 14.0 bits;  conditional E-value: 0.0001
                 EEEEC-TTTCHHHHHHHHHHHHCTS CS
       NACHT   3 vilqGeaGsGKTtLlqklalawaeg 27 
                 +++ G aG+GKT Ll +++ ++ ++
  EPX71767.1 424 CFVVGSAGCGKTSLLSSFINKIPHR 448
                 799***************9988665 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.0    0.0026      0.88       1      21 [.       6      26 ..       6      51 .. 0.82
   2 ?    0.3   0.0       2.6     9e+02      65      93 ..     152     181 ..     145     190 .. 0.79
   3 !    9.2   0.0    0.0044       1.5       2      26 ..     425     449 ..     424     471 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.0026
  RNA_helicase  1 iwlyGpsgeGKStlakeLaka 21
                  ++++G++g+GKS+l+  L+++
    EPX71767.1  6 VVICGDQGVGKSSLISALIQE 26
                  689**************9986 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 2.6
  RNA_helicase  65 e.npsdlaelirlvsstpyplnmasleekg 93 
                   + n ++l+ ++r +  +p+++  +  e+k 
    EPX71767.1 152 KvNVNELFYICRSCVIYPIIPLWDTKEKKL 181
                   447899**************9999988873 PP

  == domain 3  score: 9.2 bits;  conditional E-value: 0.0044
  RNA_helicase   2 wlyGpsgeGKStlakeLakallkkl 26 
                   +++G++g+GK++l  ++++++  ++
    EPX71767.1 425 FVVGSAGCGKTSLLSSFINKIPHRV 449
                   799***************9997666 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.0    0.0041       1.4      33      56 ..       3      26 ..       1      39 [. 0.84
   2 !   10.3   0.0    0.0011      0.38      36      64 ..     424     455 ..     405     482 .. 0.75

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0041
       AAA_7 33 kkpvllvGptGtGKtviikdllkk 56
                +  v+++G++G+GK+++i+ l+++
  EPX71767.1  3 EVRVVICGDQGVGKSSLISALIQE 26
                56899**************98876 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.0011
       AAA_7  36 vllvGptGtGKtviikdllkkld...kekyls 64 
                 +++vG++G+GKt++++++++k++   ++++++
  EPX71767.1 424 CFVVGSAGCGKTSLLSSFINKIPhrvSDDLIP 455
                 5789*****************99333344444 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0     0.033        11      23      45 ..       6      28 ..       2      40 .. 0.83
   2 !   12.3   0.0   0.00033      0.11      22      44 ..     423     445 ..     414     482 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.033
    ATPase_2 23 yfiYGpegsGKtaLlkeiienle 45
                ++i G +g+GK++L+  +i++ +
  EPX71767.1  6 VVICGDQGVGKSSLISALIQEDN 28
                799***************99865 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 0.00033
    ATPase_2  22 iyfiYGpegsGKtaLlkeiienl 44 
                   f+ G+ g+GKt+Ll  +i++ 
  EPX71767.1 423 LCFVVGSAGCGKTSLLSSFINKI 445
                 579*****************986 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0      0.16        57      22      47 ..       5      29 ..       1      39 [. 0.82
   2 !   13.3   0.0   9.9e-05     0.034       6      44 ..     407     445 ..     403     488 .. 0.86

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.16
                EEEEEESTTSSHHHHHHHHCCSHCCC CS
      NB-ARC 22 vvalvGmgGvGKttlakqilnksdev 47
                 v + G  GvGK+ l++  +++ d+v
  EPX71767.1  5 RVVICGDQGVGKSSLISALIQE-DNV 29
                48899**********9998887.555 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 9.9e-05
                 HHHHHHHHCTTTSCSEEEEEEESTTSSHHHHHHHHCCSH CS
      NB-ARC   6 ekviekLlekdelqslvvalvGmgGvGKttlakqilnks 44 
                 + ++++ + k + + ++ ++vG +G+GKt l+++ +nk 
  EPX71767.1 407 RSIQHRRVSKYDRNVFLCFVVGSAGCGKTSLLSSFINKI 445
                 5566666778899999*****************999984 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.1   0.00011     0.038       1      22 [.       6      27 ..       6      36 .. 0.91
   2 ?    2.7   0.0      0.35   1.2e+02       3      19 ..     426     442 ..     424     459 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 0.00011
                EEEEEBTTTTHHHHHHHHHTS- CS
   Dynamin_N  1 iavvGsqSsGKSSvlnaLlged 22
                ++++G+q  GKSS++ aL++ed
  EPX71767.1  6 VVICGDQGVGKSSLISALIQED 27
                79******************98 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.35
                 EEEBTTTTHHHHHHHHH CS
   Dynamin_N   3 vvGsqSsGKSSvlnaLl 19 
                 vvGs   GK+S+l + +
  EPX71767.1 426 VVGSAGCGKTSLLSSFI 442
                 9********99998766 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.0    0.0011      0.36      25      42 ..       6      23 ..       1      25 [. 0.85
   2 ?   -1.7   0.0       7.3   2.5e+03      35      47 ..     182     194 ..     182     200 .. 0.83
   3 ?    4.3   0.0     0.095        33      15      39 ..     413     438 ..     400     443 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.0011
      AAA_29 25 tlltGpsGsGKSTllDAi 42
                +++ G++G+GKS+l+ A+
  EPX71767.1  6 VVICGDQGVGKSSLISAL 23
                689************987 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 7.3
      AAA_29  35 KSTllDAiqalLv 47 
                 KS  +DA++ ++ 
  EPX71767.1 182 KSVAVDALSRIFF 194
                 99******98875 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.095
      AAA_29  15 htieidlkg.atlltGpsGsGKSTll 39 
                 ++ + d++   ++++G  G GK++ll
  EPX71767.1 413 RVSKYDRNVfLCFVVGSAGCGKTSLL 438
                 55556655567899**********98 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0    0.0039       1.4       2      23 ..       3      26 ..       2      66 .. 0.85
   2 ?   -0.7   0.0       2.9   9.8e+02      59      76 ..     150     191 ..     108     236 .. 0.59
   3 ?    5.3   0.0     0.041        14       6      22 ..     425     441 ..     423     463 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0039
      AAA_24  2 klkiliyGpsgiGKTtlakel..g 23
                +++++i G++g+GK++l++ l  +
  EPX71767.1  3 EVRVVICGDQGVGKSSLISALiqE 26
                689***************988653 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 2.9
      AAA_24  59 l........................aaeladyktlviDtide 76 
                 l                        +++++++k++ +D ++ 
  EPX71767.1 150 LekvnvnelfyicrscviypiiplwDTKEKKLKSVAVDALSR 191
                 033333344444444455555555566666666666666665 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.041
      AAA_24   6 liyGpsgiGKTtlakel 22 
                 +++G++g GKT+l++++
  EPX71767.1 425 FVVGSAGCGKTSLLSSF 441
                 799************99 PP

>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.0   0.00095      0.33       5      32 ..       4      31 ..       2      59 .. 0.88
   2 ?    4.9   0.0      0.04        14       6      28 ..     423     445 ..     419     482 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00095
                EEEEEEEBTTSSCCCCCCTTSSSS---- CS
      Septin  5 ftlmvvGesglGkttlintlfetdliee 32
                + ++++G++g+Gk++li +l+++d +++
  EPX71767.1  4 VRVVICGDQGVGKSSLISALIQEDNVTA 31
                6799******************998765 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.04
                 EEEEEEBTTSSCCCCCCTTSSSS CS
      Septin   6 tlmvvGesglGkttlintlfetd 28 
                   +vvG+ g Gkt+l+ +++++ 
  EPX71767.1 423 LCFVVGSAGCGKTSLLSSFINKI 445
                 5689**************99864 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.0     0.011       3.8       1      24 [.       6      29 ..       6      47 .. 0.83
   2 ?    7.8   0.0     0.012       4.2       3      22 ..     426     445 ..     424     487 .. 0.80

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.011
                EEEESSTTSSHHHHHHHHHHHHTH CS
         AAA  1 vllyGppGtGKTllakavakelgv 24
                v+++G  G+GK++l++a+++e +v
  EPX71767.1  6 VVICGDQGVGKSSLISALIQEDNV 29
                5789***************99554 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.012
                 EESSTTSSHHHHHHHHHHHH CS
         AAA   3 lyGppGtGKTllakavakel 22 
                 ++G  G+GKT+l ++ ++++
  EPX71767.1 426 VVGSAGCGKTSLLSSFINKI 445
                 79************999986 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0      0.25        86       7      35 ..      12      39 ..       6      56 .. 0.79
   2 !   10.5   0.0    0.0011      0.37       2      22 ..     425     445 ..     424     469 .. 0.83
   3 ?   -1.0   0.0       3.5   1.2e+03      96     178 ..     536     615 ..     535     627 .. 0.80

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.25
  Viral_helicase1  7 pGcGKStlirkllrtsliltvnrptaell 35
                      G GKS+li  l+++  ++t++++ + ++
       EPX71767.1 12 QGVGKSSLISALIQE-DNVTAIPKVFPII 39
                     599**********99.7777787776665 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.0011
  Viral_helicase1   2 vvhGvpGcGKStlirkllrts 22 
                       v G +GcGK++l+ +++++ 
       EPX71767.1 425 FVVGSAGCGKTSLLSSFINKI 445
                      58899*************983 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 3.5
  Viral_helicase1  96 DplQipfhsrnasfllahlpsslshrvgrrttyllpsdvaeilsakvgteveversgelkvetepkgqekvlvyltftqalke 178
                      D++Q  +  + ++f      +s +h ++  + +  ++++++i ++  ++  ++  ++++k +++++ q   +v lt+  al+ 
       EPX71767.1 536 DRQQQRYPVQPDEFTKQLSLPSPTHISTSAIWNTSKDFFIQIAESA-QFPANSIIQIPDKNSNKINYQ--LVVALTAFGALLL 615
                      7888899988888888888888899999999999999999999999.999999999999778888888..6666666555555 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   0.0   0.00053      0.18      56      81 ..       6      31 ..       2      92 .. 0.71
   2 ?    2.7   0.0      0.17        58      57      78 ..     425     446 ..     409     464 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00053
      DUF815 56 vLLwGarGtGKSslvkallneyaeeg 81
                v++ G++G+GKSsl+ al++e + + 
  EPX71767.1  6 VVICGDQGVGKSSLISALIQEDNVTA 31
                8899**************99876555 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.17
      DUF815  57 LLwGarGtGKSslvkallneya 78 
                 +++G+ G+GK sl+ + +n++ 
  EPX71767.1 425 FVVGSAGCGKTSLLSSFINKIP 446
                 468***********99998875 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.1     0.051        17       4      24 ..     191     211 ..     188     217 .. 0.88
   2 !   12.5   2.2   0.00031      0.11       2      27 ..     309     334 ..     308     336 .. 0.92

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.051
   EF-hand_6   4 eaFklfDkdgdGkidaeElrk 24 
                 ++F l Dk++d  +++eEl +
  EPX71767.1 191 RIFFLSDKNNDDLLSTEELAH 211
                 688899************976 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 0.00031
   EF-hand_6   2 lreaFklfDkdgdGkidaeElrkalr 27 
                 l ++F +fD+d+dG ++ +El +++r
  EPX71767.1 309 LVDLFYQFDRDNDGALNDDELSDLFR 334
                 6799*****************99987 PP

>> EF-hand_5  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1       5.9     2e+03       9      22 ..     197     210 ..     197     213 .. 0.78
   2 !   16.3   2.3   1.5e-05     0.005       1      23 [.     309     331 ..     309     333 .. 0.92

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 5.9
                 -SS-SSCE-HHHHH CS
   EF-hand_5   9 DlNgDGkIskeELk 22 
                 D+N+D  +s eEL 
  EPX71767.1 197 DKNNDDLLSTEELA 210
                 88999778888886 PP

  == domain 2  score: 16.3 bits;  conditional E-value: 1.5e-05
                 HHHHHHHH-SS-SSCE-HHHHHH CS
   EF-hand_5   1 lkdtFqaiDlNgDGkIskeELkt 23 
                 l+d+F ++D ++DG ++ +EL  
  EPX71767.1 309 LVDLFYQFDRDNDGALNDDELSD 331
                 789*****************976 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0     0.034        12       2      24 ..       6      28 ..       6      34 .. 0.87
   2 !    7.8   0.0    0.0099       3.4       1      39 [.     423     460 ..     423     497 .. 0.78

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.034
      AAA_33  2 vllvGlpGsGKstlaerllkklg 24
                v+++G +G+GKs l+  l+++  
  EPX71767.1  6 VVICGDQGVGKSSLISALIQEDN 28
                789**************998865 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0099
      AAA_33   1 lvllvGlpGsGKstlaerllkklgavllssdtlrrrlfg 39 
                 l ++vG +G+GK+ l+ + ++k    ++s d + +++++
  EPX71767.1 423 LCFVVGSAGCGKTSLLSSFINK-IPHRVSDDLIPNTVVN 460
                 6799************999933.3667777776666666 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0     0.054        19       3      25 ..       6      28 ..       4      36 .. 0.86
   2 ?   -1.0   0.0       3.2   1.1e+03     111     154 ..      48      87 ..      33      92 .. 0.81
   3 !    7.4   0.0    0.0086         3       4      23 ..     425     444 ..     422     468 .. 0.81

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.054
                EEEEESTTCCHHHHHHHHHCT-- CS
        cobW  3 tvltGflGsGKTtLlnhllenra 25
                +v++G  G GK++L+++l+++ +
  EPX71767.1  6 VVICGDQGVGKSSLISALIQEDN 28
                699****************8754 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 3.2
                 CECEEEEEEETTTH.CCHCCHHHHHHHHHHTSSEEEEE-HHHHC CS
        cobW 111 tldavvavvDaknleaeeekieekaedqlaaadllvlnKtDlld 154
                 + d+ +++vD     ++++++++ + +ql +a++l l   D  +
  EPX71767.1  48 NDDVSLVLVDT----QSGSNERDYLASQLRKANVLCLVYSDNYS 87 
                 55677788888....8999999***********99987777665 PP

  == domain 3  score: 7.4 bits;  conditional E-value: 0.0086
                 EEEESTTCCHHHHHHHHHCT CS
        cobW   4 vltGflGsGKTtLlnhllen 23 
                  ++G+ G GKT+Ll++ +++
  EPX71767.1 425 FVVGSAGCGKTSLLSSFINK 444
                 689************99954 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00072      0.25       3      59 ..       7      55 ..       6      76 .. 0.68
   2 ?   -2.4   0.1       9.8   3.4e+03     107     162 ..     315     370 ..     306     396 .. 0.66
   3 ?    1.2   0.0      0.73   2.5e+02       3      18 ..     425     440 ..     423     477 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00072
      AAA_21  3 vliGpNgsGKSnLLdaldllarldrdvegltdelsggggirkipslldlydpeipfe 59
                v+ G+ g+GKS+L+ al         +e+  +  ++ ++i++ip  + l+d+ + + 
  EPX71767.1  7 VICGDQGVGKSSLISAL--------IQEDNVTAIPKVFPIISIPPDPKLNDDVSLVL 55
                99***************........44555555555556666666655555555444 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 9.8
      AAA_21 107 eedvfnpeargirggvsvfslkelsvsepndlqfgkaltditsrawsllllldglr 162
                 ++d++n+ a + +++ + f+  + +++ ++  +f+  ++++ + ++s++ +l  + 
  EPX71767.1 315 QFDRDNDGALNDDELSDLFRYTPGLPETWIHSKFPNSTVLNEHGFASYNGWLAQWS 370
                 45555566666666666666666666666667777777777777777777666554 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.73
      AAA_21   3 vliGpNgsGKSnLLda 18 
                 +++G  g+GK++LL  
  EPX71767.1 425 FVVGSAGCGKTSLLSS 440
                 589999*******975 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.081        28      18      39 ..       5      26 ..       2      32 .. 0.87
   2 ?    8.5   0.0    0.0031       1.1      18      40 ..     423     445 ..     407     453 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.081
  Zeta_toxin 18 lillgGqpGAGKselaellkde 39
                 +++ G +G GKs+l+++l +e
  EPX71767.1  5 RVVICGDQGVGKSSLISALIQE 26
                58999************99887 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0031
  Zeta_toxin  18 lillgGqpGAGKselaellkdel 40 
                 l +++G+ G+GK++l++ + +++
  EPX71767.1 423 LCFVVGSAGCGKTSLLSSFINKI 445
                 689**************999887 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.0    0.0057         2       1      28 [.       5      33 ..       5      39 .. 0.83
   2 ?    3.6   0.3       0.2        69       4      18 ..     426     440 ..     423     452 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0057
      AAA_28  1 kivitGgestGKTtlleaLaar.gypvvp 28
                ++vi G ++ GK++l++aL ++ +++ +p
  EPX71767.1  5 RVVICGDQGVGKSSLISALIQEdNVTAIP 33
                79*****************8764665555 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.2
      AAA_28   4 itGgestGKTtllea 18 
                 ++G  ++GKT+ll+ 
  EPX71767.1 426 VVGSAGCGKTSLLSS 440
                 79**********986 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0    0.0013      0.44       1      21 [.       6      26 ..       6      92 .. 0.79
   2 ?    1.8   0.0      0.98   3.4e+02       2      16 ..     425     439 ..     425     488 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.0013
      AAA_18  1 IlltGtpGvGKttlakeLskr 21
                ++++G +GvGK++l  +L ++
  EPX71767.1  6 VVICGDQGVGKSSLISALIQE 26
                79**************99554 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.98
      AAA_18   2 lltGtpGvGKttlak 16 
                 ++ G +G+GKt+l  
  EPX71767.1 425 FVVGSAGCGKTSLLS 439
                 5899*******9975 PP

>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0      0.34   1.2e+02       1      18 [.       8      25 ..       8      31 .. 0.90
   2 ?   -1.8   0.0       6.1   2.1e+03     194     232 ..     120     159 ..      98     166 .. 0.63
   3 ?    5.6   0.0     0.034        12       1      22 [.     426     447 ..     426     456 .. 0.87
   4 ?    1.5   0.0      0.63   2.2e+02     131     175 ..     501     542 ..     481     591 .. 0.73

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.34
  ATP_bind_1  1 vvGpaGsGKttfvgalse 18
                ++G  G+GK+++++al++
  EPX71767.1  8 ICGDQGVGKSSLISALIQ 25
                6899**********9976 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 6.1
  ATP_bind_1 194 e.ekykklaeaiaelleefalvlrflplssekeesiedll 232
                 + +  ++ + +++ l++ef+++ + + +s+ ++  +++l+
  EPX71767.1 120 NyQGLHSIEHEMVPLINEFKEIESCILCSALEKVNVNELF 159
                 2344455666777777777777777777777776666665 PP

  == domain 3  score: 5.6 bits;  conditional E-value: 0.034
  ATP_bind_1   1 vvGpaGsGKttfvgalseilel 22 
                 vvG aG GKt++ +++++ ++ 
  EPX71767.1 426 VVGSAGCGKTSLLSSFINKIPH 447
                 89************99887665 PP

  == domain 4  score: 1.5 bits;  conditional E-value: 0.63
  ATP_bind_1 131 DsqrltdptkfisgllsalsamlrlelPhvvvlnkfDllkeklek 175
                 Ds   ++  +fi +ll    a+   ++P v + +k+Dl ++++++
  EPX71767.1 501 DSSNPNS-FSFIANLLGRYPAL--QKIPCVFAATKADLDRQQQRY 542
                 5544443.77888866555544..689***********4433332 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0      0.13        46       4      27 ..       4      27 ..       2      33 .. 0.87
   2 ?    4.4   0.0     0.069        24     121     187 ..     104     161 ..      50     194 .. 0.79
   3 ?   -1.0   0.0       3.2   1.1e+03       3      24 ..     421     442 ..     416     450 .. 0.81
   4 ?   -0.1   0.0       1.7   5.8e+02     120     154 ..     521     585 ..     488     617 .. 0.66

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.13
                EEEEEEESTTSSHHHHHHHHHHHT CS
    GTP_EFTU  4 rnigiighvDhGKtTLtdrLlykt 27
                + ++i+g+   GK++L+ +L+++ 
  EPX71767.1  4 VRVVICGDQGVGKSSLISALIQED 27
                5799****************9875 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.069
                 TTTEEEEEEESCGST..HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEBTTTTBTHHHHHHH CS
    GTP_EFTU 121 egvpiivfiNKmDrl..kaelkeiveevkqklsrkeeklekygekgekevpvvfgSalkgegvktllea 187
                  +vpi+++ NK   l   + l  i +e+   l      +++++e +    +++ +Sal++ +v++l+  
  EPX71767.1 104 INVPIVLCANKSEDLdnYQGLHSIEHEMV-PL------INEFKEIE----SCILCSALEKVNVNELFYI 161
                 35569******999988888999999998.66......55555544....699********99998765 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 3.2
                 EEEEEEEESTTSSHHHHHHHHH CS
    GTP_EFTU   3 irnigiighvDhGKtTLtdrLl 24 
                 +  + ++g    GKt+L+ + +
  EPX71767.1 421 VFLCFVVGSAGCGKTSLLSSFI 442
                 556789999999****998876 PP

  == domain 4  score: -0.1 bits;  conditional E-value: 1.7
                 HTTTEEEEEEESCGST..HHHHHHHHHHHHHHHHHH............................H CS
    GTP_EFTU 120 kegvpiivfiNKmDrl..kaelkeiveevkqklsrk............................e 154
                  +++p +++ +K+D    ++++  +++e  ++ls                               
  EPX71767.1 521 LQKIPCVFAATKADLDrqQQRYPVQPDEFTKQLSLPspthistsaiwntskdffiqiaesaqfpA 585
                 5789999999**98877688999999999888844466666665555555555555555444443 PP

>> IIGP  Interferon-inducible GTPase (IIGP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.0     0.017       5.7      35      55 ..       3      23 ..       1      28 [. 0.91
   2 ?    4.1   0.0     0.058        20      18      54 ..     404     444 ..     396     452 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.017
                -EEEEEEESTTSSHHHHHHHH CS
        IIGP 35 klkiavtGdsGnGkssFinaL 55
                ++++++ Gd G Gkss i aL
  EPX71767.1  3 EVRVVICGDQGVGKSSLISAL 23
                6899***************98 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.058
                 HHHHHHHHHHHHHHHT--EEEEEEESTTSSH....HHHHHH CS
        IIGP  18 qkvvsiikeaikeiesaklkiavtGdsGnGk....ssFina 54 
                 +k  si +  +++ ++++   +v+G +G Gk    ssFin 
  EPX71767.1 404 TKKRSIQHRRVSKYDRNVFLCFVVGSAGCGKtsllSSFINK 444
                 55556667789999****************96666788885 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.0    0.0044       1.5      23      39 ..       7      23 ..       6      25 .. 0.92
   2 ?    2.2   0.0      0.64   2.2e+02      24      37 ..     426     439 ..     416     442 .. 0.86

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.0044
      AAA_23 23 lItGpNGaGKTTildAi 39
                +I+G+ G GK++++ A+
  EPX71767.1  7 VICGDQGVGKSSLISAL 23
                8*************998 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.64
      AAA_23  24 ItGpNGaGKTTild 37 
                 ++G  G+GKT++l 
  EPX71767.1 426 VVGSAGCGKTSLLS 439
                 78999*******95 PP

>> Adeno_IVa2  Adenovirus IVa2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.0    0.0076       2.6      91     120 ..       7      36 ..       2      50 .. 0.83
   2 ?    3.2   0.0     0.088        30      82     109 ..     416     443 ..     391     461 .. 0.76

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0076
  Adeno_IVa2  91 viyGPtGsGksqllrnlissklisPiPetv 120
                 vi G  G Gks l+ +li  + +  iP   
  EPX71767.1   7 VICGDQGVGKSSLISALIQEDNVTAIPKVF 36 
                 89******************9999999853 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.088
  Adeno_IVa2  82 nyglqPviGviyGPtGsGksqllrnlis 109
                  y+++ ++  + G +G+Gk+ ll ++i 
  EPX71767.1 416 KYDRNVFLCFVVGSAGCGKTSLLSSFIN 443
                 5899999****************98875 PP

>> MobB  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0      0.13        43       2      22 ..       6      26 ..       5      31 .. 0.91
   2 ?    6.7   0.0     0.018       6.3       3      23 ..     425     445 ..     422     450 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.13
        MobB  2 lgivgksgsGKTtLleklipe 22
                + i+g +g GK +L++ li+e
  EPX71767.1  6 VVICGDQGVGKSSLISALIQE 26
                679****************86 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.018
        MobB   3 givgksgsGKTtLleklipel 23 
                  +vg  g+GKT+Ll+  i+++
  EPX71767.1 425 FVVGSAGCGKTSLLSSFINKI 445
                 468*************99876 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.098        34      27      44 ..       6      23 ..       1      26 [. 0.88
   2 ?    6.4   0.0     0.015       5.3       5      43 ..     401     440 ..     398     452 .. 0.73

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.098
                EEEEESTTSSHHHHHHHH CS
                xxxxxxxxxxxxxxxxxx RF
       SMC_N 27 taivGpNGSGKsnlldAi 44
                 +i G  G GKs+l+ A+
  EPX71767.1  6 VVICGDQGVGKSSLISAL 23
                5899***********997 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.015
                 EEEESETTEECEEEEEETTSSE..EEEEESTTSSHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxx RF
       SMC_N   5 leienFksyagktvilpfsksf..taivGpNGSGKsnlldA 43 
                 l++++ +s++ ++ + ++++++   ++vG+ G+GK++ll +
  EPX71767.1 401 LKVTKKRSIQ-HRRVSKYDRNVflCFVVGSAGCGKTSLLSS 440
                 5666777886.444444444431268***********9976 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0      0.12        41       5      27 ..       6      28 ..       3      58 .. 0.87
   2 ?    5.8   0.0     0.038        13       6      27 ..     425     446 ..     422     487 .. 0.75

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.12
      AAA_14  5 lvitGaRrvGKTtllkqlikell 27
                +vi G   vGK+ l+  li+e  
  EPX71767.1  6 VVICGDQGVGKSSLISALIQEDN 28
                689999*************9977 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.038
      AAA_14   6 vitGaRrvGKTtllkqlikell 27 
                 +++G   +GKT ll  +i++  
  EPX71767.1 425 FVVGSAGCGKTSLLSSFINKIP 446
                 789999***********97755 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0      0.18        62      34      53 ..       4      23 ..       1      25 [. 0.85
   2 ?    0.8   0.0      0.89   3.1e+02     141     164 ..     179     203 ..     174     221 .. 0.73
   3 ?    3.9   0.0     0.098        34      35      52 ..     423     440 ..     408     445 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.18
      AAA_25 34 elallaGapgtGKttlaldl 53
                  ++++G++g+GK+ l + l
  EPX71767.1  4 VRVVICGDQGVGKSSLISAL 23
                56899**********98876 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.89
      AAA_25 141 egvrlvviDplsralgg.densnsd 164
                 ++++ v +D lsr++   d+n+++ 
  EPX71767.1 179 KKLKSVAVDALSRIFFLsDKNNDDL 203
                 5588899******999955555543 PP

  == domain 3  score: 3.9 bits;  conditional E-value: 0.098
      AAA_25  35 lallaGapgtGKttlald 52 
                 l+ ++G  g+GKt l+++
  EPX71767.1 423 LCFVVGSAGCGKTSLLSS 440
                 7899***********987 PP

>> Hpr_kinase_C  HPr Serine kinase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.1     0.013       4.4      19      41 ..       4      26 ..       1      30 [. 0.87
   2 ?    2.7   0.0      0.23        79      22      52 ..     425     455 ..     417     475 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.013
                  EEEEEEESTCHHHHHHHHHHHTT CS
  Hpr_kinase_C 19 vGvLitGesgvGKselaleLikr 41
                  v v+i G+ gvGKs l   Li+ 
    EPX71767.1  4 VRVVICGDQGVGKSSLISALIQE 26
                  6799************9999986 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.23
                   EEEESTCHHHHHHHHHHHTTT-EEEEESSEE CS
  Hpr_kinase_C  22 LitGesgvGKselaleLikrghrLvaDDave 52 
                   +++G++g GK+ l   +i++  + v+DD + 
    EPX71767.1 425 FVVGSAGCGKTSLLSSFINKIPHRVSDDLIP 455
                   579*****************9999****985 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0         3     1e+03       4      25 ..       6      27 ..       4      66 .. 0.85
   2 ?    9.8   0.0    0.0012      0.43       3      30 ..     423     450 ..     422     489 .. 0.73

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 3
     DUF2075  4 vlVtGvaGtGKtvvllnllael 25
                v++ G+ G GK+ + ++l+ e 
  EPX71767.1  6 VVICGDQGVGKSSLISALIQED 27
                7899********9999998875 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.0012
     DUF2075   3 vvlVtGvaGtGKtvvllnllael...eddee 30 
                 +++V G aG GKt +l+++++++       +
  EPX71767.1 423 LCFVVGSAGCGKTSLLSSFINKIphrV---S 450
                 69********************95331...2 PP

>> Guanylate_kin  Guanylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.0    0.0097       3.3       5      27 ..       6      28 ..       2      46 .. 0.86
   2 ?    1.9   0.0      0.45   1.5e+02       7      37 ..     426     457 ..     421     481 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0097
                   EEEESTTTSSHHHHHHHHHHHST CS
  Guanylate_kin  5 vvlvgpsgaGksslkkaLlselp 27
                   vv+ g +g+Gkssl++aL++e++
     EPX71767.1  6 VVICGDQGVGKSSLISALIQEDN 28
                   89*****************9975 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.45
                    EESTTTSSHHHHHHHHHHHSTTTEE.E--EEE CS
  Guanylate_kin   7 lvgpsgaGksslkkaLlselpekfg.vsvsht 37 
                    +vg  g Gk sl +  +++ p++ +   +++t
     EPX71767.1 426 VVGSAGCGKTSLLSSFINKIPHRVSdDLIPNT 457
                    79********************9976788877 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       3.4   1.2e+03      25      42 ..       6      23 ..       4      25 .. 0.86
   2 ?    9.5   0.0    0.0017      0.57      26      70 ..     425     469 ..     420     475 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 3.4
  Mg_chelatase 25 lllvGppGsGKtmlakrl 42
                  ++++G  G GK+ l+++l
    EPX71767.1  6 VVICGDQGVGKSSLISAL 23
                  6899********999887 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.0017
  Mg_chelatase  26 llvGppGsGKtmlakrlpsllpplseeealevakiasvagkkeee 70 
                   ++vG++G+GKt l + + + +p+  +++ +  + ++sv  +++++
    EPX71767.1 425 FVVGSAGCGKTSLLSSFINKIPHRVSDDLIPNTVVNSVEFQSRQR 469
                   579***********************************9976665 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.0     0.011       3.7      49      70 ..       5      26 ..       1      36 [. 0.85
   2 ?    1.9   0.0      0.47   1.6e+02      31      66 ..     405     440 ..     390     447 .. 0.74

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.011
   IstB_IS21 49 nivllGpsGvGKshlaialgve 70
                 +v++G  GvGKs l  al +e
  EPX71767.1  5 RVVICGDQGVGKSSLISALIQE 26
                689************9999765 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.47
   IstB_IS21  31 dkrkvkeLatlsfiekkenivllGpsGvGKshlaia 66 
                 +kr +++ +  ++ ++   + ++G +G GK+ l  +
  EPX71767.1 405 KKRSIQHRRVSKYDRNVFLCFVVGSAGCGKTSLLSS 440
                 45555555556666666668899********98665 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.0    0.0081       2.8      13      46 ..       2      35 ..       1      41 [. 0.92
   2 ?    0.5   0.0         1   3.5e+02      17      66 ..     424     477 ..     410     569 .. 0.68

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0081
                TEEEEEEEESTTSSHHHHHHHHHHSSCEECSSSS CS
         Arf 13 kelrilllGLDnaGKtTilkklkleelvttvPTi 46
                ke+r+++ G  + GK+ ++  l +e+ vt +P +
  EPX71767.1  2 KEVRVVICGDQGVGKSSLISALIQEDNVTAIPKV 35
                89*****************************976 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 1
                 EEEEESTTSSHHHHHHHHHHSSCEE....CSSSSSEEEEEEEETTEEEEEEEE- CS
         Arf  17 illlGLDnaGKtTilkklkleelvt....tvPTigfnveeleiknlkftvwDvG 66 
                 + ++G  + GKt +l  + ++  ++     +P +  n+ e + ++  + + ++G
  EPX71767.1 424 CFVVGSAGCGKTSLLSSFINKIPHRvsddLIPNTVVNSVEFQSRQRYLVLSEIG 477
                 678899999999999887665322212236666666666666666555555555 PP

>> MCM  MCM P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0     0.016       5.5      57      78 ..       3      24 ..       1      32 [. 0.85
   2 ?    2.2   0.0      0.23        80      56      84 ..     417     448 ..     394     452 .. 0.69

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.016
                S-EEEEEESSTSTHHHHHHHHH CS
         MCM 57 dinvllvgdpgtaKsqlLkyve 78
                ++ v+++gd g++Ks l+ ++ 
  EPX71767.1  3 EVRVVICGDQGVGKSSLISALI 24
                688**************98765 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.23
                 SS-EEEE...EESSTSTHHHHHHHHHHHSSSE CS
         MCM  56 gdinvll...vgdpgtaKsqlLkyveklapra 84 
                  d nv l   vg  g++K+ lL +  + +p+ 
  EPX71767.1 417 YDRNVFLcfvVGSAGCGKTSLLSSFINKIPHR 448
                 44444432228***********9998888765 PP

>> TrwB_AAD_bind  Type IV secretion-system coupling protein DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0      0.34   1.2e+02      17      38 ..       5      26 ..       2      30 .. 0.88
   2 ?    6.7   0.0    0.0084       2.9      18      44 ..     424     450 ..     415     515 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.34
  TrwB_AAD_bind 17 hilivGttGsGKtqalekllra 38
                    ++i G +G GK+  +++l+++
     EPX71767.1  5 RVVICGDQGVGKSSLISALIQE 26
                   5789***************975 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0084
  TrwB_AAD_bind  18 ilivGttGsGKtqalekllrairargd 44 
                     ++vG++G GKt  l++++++i +r  
     EPX71767.1 424 CFVVGSAGCGKTSLLSSFINKIPHRVS 450
                    5789*****************998864 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.056        19       2      23 ..       5      26 ..       4      33 .. 0.87
   2 ?   -1.6   0.0       5.1   1.8e+03     100     150 ..      71     119 ..      48     123 .. 0.71
   3 ?    2.1   0.0      0.37   1.3e+02       4      21 ..     425     442 ..     422     450 .. 0.83
   4 ?   -2.6   0.0       9.8   3.4e+03      69      94 ..     561     586 ..     557     609 .. 0.75

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.056
                EEEEEESTTSSHHHHHHHHHTT CS
      FeoB_N  2 tvalvGnpnvGkttlfnaltga 23
                +v+++G++ vGk++l+ al + 
  EPX71767.1  5 RVVICGDQGVGKSSLISALIQE 26
                6899**************9876 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 5.1
                 HHHHTTSSEEEEEETHHHHHHTTEEE-HHHHHHHHTS-E.EEEBTTTTBTHH CS
      FeoB_N 100 qllelgvpvvlalnmideaekkgieidlkkLsekLgvpv.vktsakkkegie 150
                 q   l++  vl+l  +d+ + ++++i      ++Lg++v + ++a+k+e+++
  EPX71767.1  71 Q---LRKANVLCLVYSDNYSYERVSIFWLPYFRSLGINVpIVLCANKSEDLD 119
                 4...445667888888888888888888888888888876666777777766 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.37
                 EEEESTTSSHHHHHHHHH CS
      FeoB_N   4 alvGnpnvGkttlfnalt 21 
                  +vG   +Gkt+l+ +  
  EPX71767.1 425 FVVGSAGCGKTSLLSSFI 442
                 689**********98765 PP

  == domain 4  score: -2.6 bits;  conditional E-value: 9.8
                 HHHHHHHCTSSSEEEEEEEGGGHHHH CS
      FeoB_N  69 vardflleeepdvvvnvvdatnlern 94 
                 ++++ + +++ d  +++++++++  n
  EPX71767.1 561 ISTSAIWNTSKDFFIQIAESAQFPAN 586
                 77888999999999999998876554 PP

>> SPARC_Ca_bdg  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.2       4.7   1.6e+03      62      90 ..     117     145 ..     113     155 .. 0.83
   2 ?    6.6   0.1     0.028       9.5      44      81 ..     177     214 ..     171     224 .. 0.82
   3 ?    2.6   0.0      0.49   1.7e+02      60      79 ..     313     332 ..     298     337 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 4.7
  SPARC_Ca_bdg  62 klDtnsdkvlsksELaplraplvklehCi 90 
                   +lD  +  +  ++E+ pl +++ ++e+Ci
    EPX71767.1 117 DLDNYQGLHSIEHEMVPLINEFKEIESCI 145
                   56666666667899****999*******8 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.028
  SPARC_Ca_bdg  44 eeeknlkeckepvawkFsklDtnsdkvlsksELaplra 81 
                   +e+k ++  ++++   F   D+n+d +ls++ELa+l +
    EPX71767.1 177 KEKKLKSVAVDALSRIFFLSDKNNDDLLSTEELAHLSE 214
                   55666677778888888899**************9986 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.49
  SPARC_Ca_bdg  60 FsklDtnsdkvlsksELapl 79 
                   F ++D ++d+ l+  EL++l
    EPX71767.1 313 FYQFDRDNDGALNDDELSDL 332
                   899**************987 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   3.0     0.019       6.5      26      47 ..       6      24 ..       2     268 .. 0.69
   2 ?    4.2   0.5     0.082        28      25      43 ..     423     441 ..     407     604 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.019
      AAA_15 26 tvliGkNnsGKSsilealdlFl 47
                 v++G +++GKSs++ al   +
  EPX71767.1  6 VVICGDQGVGKSSLISAL---I 24
                58***************9...4 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.082
      AAA_15  25 ltvliGkNnsGKSsileal 43 
                 l +++G  ++GK+s+l  +
  EPX71767.1 423 LCFVVGSAGCGKTSLLSSF 441
                 7789***********9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (634 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       700  (0.0390429); expected 358.6 (0.02)
Passed bias filter:                      647  (0.0360868); expected 358.6 (0.02)
Passed Vit filter:                       129  (0.00719505); expected 17.9 (0.001)
Passed Fwd filter:                        52  (0.00290033); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              52  [number of targets reported over threshold]
# CPU time: 0.83u 0.36s 00:00:01.19 Elapsed: 00:00:00.55
# Mc/sec: 3480.36
//
Query:       EPX71768.1  [L=894]
Description: transcription factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      1e-11   44.4   0.5      6e-10   38.6   0.7    2.5  2  Fungal_trans  Fungal specific transcription factor domain
    7.3e-09   35.6   8.4    1.4e-08   34.7   8.4    1.5  1  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.6   0.7   6.6e-14     6e-10       2     185 ..     491     671 ..     490     679 .. 0.81
   2 !    3.3   0.0    0.0038        34     216     264 ..     679     721 ..     671     729 .. 0.73

  Alignments for each domain:
  == domain 1  score: 38.6 bits;  conditional E-value: 6.6e-14
  Fungal_trans   2 drffsnfhpqfpilhk............psflpktssenssksayaspllllailalGalfsesetkesnssltsesqefiafplraeilihedfss 86 
                   dr+   +h+ +pilh+            p+fl++           + ++   +++  + ++++s+ +++  ++           l   i++  + ++
    EPX71768.1 491 DRYYLLIHSTLPILHHsktrlkmelekaPKFLRSC----------CLHAIYSLVNRPPFSSLGSIFHKNPMKAIG---------LLNLICT--NVQD 566
                   89**************7666666655555666666..........666666666666666666666666444444.........4557777..**** PP

  Fungal_trans  87 pssslwilqsLlllelyektssdralher.......hhgvavrlarslgLhrnpsyvgkkslwklweeeaesrrRlwwaaFylDktialklGrppll 176
                   +s+++ +lq+  ll++ +  ++ ++   r       +hg av la  ++Lh  +     +   + + + a   rR ww   +lD+++++ +  p ++
    EPX71768.1 567 FSNRILHLQTMILLAVESDQRGPTTITGRnglpqsmWHGAAVGLACNMRLHIQSHVPLQSAYEDMDGN-AALCRRAWWVLVILDRWHSVSTCSPLFI 662
                   **********************8888888889999****************88877776666666677.**************************** PP

  Fungal_trans 177 ddsqinlpL 185
                   ++s+i+l+L
    EPX71768.1 663 PESCIKLSL 671
                   *******98 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.0038
  Fungal_trans 216 kiasfllaLkkilskiagsllsiekqlqqrdlqseklswveeleraldn 264
                   +++s+l++L+ i+++i++ ++    ++++++        +++l++++d+
    EPX71768.1 679 SFPSQLVRLSLIVGHISD-VIQSPDPSDRENPI-----VTQQLRSEIDA 721
                   789***************.66666666666666.....46666666665 PP

>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.7   8.4   1.6e-12   1.4e-08       1      39 [.     119     160 ..     119     161 .. 0.90

  Alignments for each domain:
  == domain 1  score: 34.7 bits;  conditional E-value: 1.6e-12
                 SS-HHHHHCT---ST...SSSS-HHHHHCTHHHCCCCTCCCE CS
     Zn_clus   1 haCdnCrkkKvKCda...kkPaCsnCkklnleCtfysesskr 39 
                 +aCd CrkkK++Cd     ++aC nC k++l+C f + + kr
  EPX71768.1 119 RACDLCRKKKIRCDSvegSTGACINCSKHSLQCIFTRTQLKR 160
                 69*************9988999************88877766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (894 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       548  (0.030565); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.69u 0.33s 00:00:01.02 Elapsed: 00:00:00.51
# Mc/sec: 5266.46
//
Query:       EPX71769.1  [L=331]
Description: hypothetical protein SOCG_16241 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.55    9.7   2.7        1.7    8.1   0.2    2.2  2  DUF2884   Protein of unknown function (DUF2884)


Domain annotation for each model (and alignments):
>> DUF2884  Protein of unknown function (DUF2884)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.2      0.01   1.8e+02      51     104 ..       2      57 ..       1      63 [. 0.78
   2 ?    8.1   0.2   9.3e-05       1.7     102     152 ..     105     155 ..      92     184 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.01
     DUF2884  51 leqyseeirqqvPevaelasdgvdl..Asdaldevltellgedsevaeklktklde 104
                 +e++se +++++P v++ +  ++ l    +++++v+ + lg+++ + +k +++ d+
  EPX71769.1   2 VETLSEVVTTTLPSVVATTPMVMTLmvTLTTINSVVINSLGNNNMQSSKSNKSYDQ 57 
                 7889999999*****99998876652267899999999999998887777777665 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 9.3e-05
     DUF2884 102 ldelkarvkekfykdgdklvlgaqslesldeafdkefeqeieelveesiGs 152
                  + +++ v++ f+++gd l  g++++++ + +f + +eqe + l+++  ++
  EPX71769.1 105 HAAVFSAVQKYFSQNGDALANGQGHSNQHQSDFLSMVEQEAQGLMNNNASG 155
                 5678999***********************************999987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       854  (0.0476323); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 2264.09
//
Query:       EPX71770.1  [L=376]
Description: biotin synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.5e-20   70.9   0.0    2.2e-19   69.4   0.0    1.8  2  BATS         Biotin and Thiamin Synthesis associated domain
    4.6e-19   69.4   0.1    9.5e-19   68.4   0.1    1.5  2  Radical_SAM  Radical SAM superfamily


Domain annotation for each model (and alignments):
>> BATS  Biotin and Thiamin Synthesis associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       1.7   1.5e+04      30      40 ..     181     191 ..     175     207 .. 0.58
   2 !   69.4   0.0   2.5e-23   2.2e-19       1      85 [.     237     329 ..     237     330 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 1.7
                 CCTCHH-HHHH CS
        BATS  30 llsgResaefr 40 
                 ++s+R   e+ 
  EPX71770.1 181 IISTRSYDERL 191
                 56666543333 PP

  == domain 2  score: 69.4 bits;  conditional E-value: 2.5e-23
                 E--B----TCCCC.............HHHHHHHHHHSTTSE.CCCTCHH-HHHHHH.HHHCCT--EEE-C---TTTGGGSESSTT-TCCCCHHHHHHTT CS
        BATS   1 siprlrpikdtpl.............lkiiaalRlllPkag.illsgResaefrdq.lllklGansisagsktevggyaflttdgrsleedvkmleelG 84 
                 +i++l+pi++tp+             l+ ia++R+++Pk+  ++++gR++ ++ +q +++++Gans+++g+k       +ltt+  ++++d +++ ++G
  EPX71770.1 237 PINALVPIPGTPIgdmvkkpvgfhsfLRAIATARICMPKTIiRFSAGRTQFSETEQvMAFMAGANSVFTGEK-------MLTTPSVTWDQDSQLFHKWG 328
                 8**********************************************************************9.......******************** PP

                 - CS
        BATS  85 l 85 
                 +
  EPX71770.1 329 F 329
                 7 PP

>> Radical_SAM  Radical SAM superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.4   0.1   1.1e-22   9.5e-19       4     163 ..      65     222 ..      62     226 .. 0.81
   2 ?   -3.5   0.0       1.3   1.1e+04     117     138 ..     249     270 ..     236     280 .. 0.73

  Alignments for each domain:
  == domain 1  score: 68.4 bits;  conditional E-value: 1.1e-22
                  ESEESS--TTTSCCTT.HHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEESSTGGGS......TTHHHHHHHHHHTCCCTEEEEEEECSSCHGHHHH CS
                  xxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Radical_SAM   4 trgCnlrCsfCarpet.vrregrgrslsveeileevkelkaekgvkevilgggeplly......pdfvellerlaklavpgiritvetngtlpdeekl 94 
                  t gC+ +C++C++++  +   ++ r + v++i+e++ ++ + kg   + +g+   +l+      +++ e +++ ++l   +++++v+   ++++ee++
   EPX71770.1  65 TGGCTEDCKYCSQSSRySTGVKPTRLMKVDDIMEKAHIA-KAKGSTRFCMGSAWRDLNgrtrtfKNILEVIKQVRAL---NMEVCVTL--GMLNEEQA 156
                  78************999999999****************.6999888888877777774442213343444444443...44444444..4444**** PP

                  HHHHHTT-SEEEEEEBSSSHHHHHHHHTCTSHHHHHHHHHHHHHHTTSETEEEEEEEBTTTSHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Radical_SAM  95 erllelgvdrvslgleaaddekvlklmnrghtfeevlealeklreagikrvvdrivglpGendeeleel 163
                  + l+e+g++ ++++l++  +  + k++  + +++e+l++++++r+agik v+++ +++ Ge ++++  l
   EPX71770.1 157 KDLKEAGLTAYNHNLDTSPEY-YPKII-STRSYDERLNTIDNIRKAGIK-VCSGGILGLGEKEQDRIGL 222
                  *********************.*****.99*******************.9999999999999997655 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 1.3
                  HHHHHTCTSHHHHHHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxx RF
  Radical_SAM 117 vlklmnrghtfeevlealeklr 138
                  + ++++++ +f  +l+a+ ++r
   EPX71770.1 249 IGDMVKKPVGFHSFLRAIATAR 270
                  5667777777888888888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (376 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       472  (0.0263261); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2611.82
//
Query:       EPX71771.1  [L=502]
Description: SMR domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-07   31.0   0.0    6.2e-07   29.7   0.0    1.7  1  Smr       Smr domain
  ------ inclusion threshold ------
      0.028   14.3   0.2       0.15   12.0   0.1    2.2  2  DUF4224   Domain of unknown function (DUF4224)
      0.032   13.9   0.2      0.071   12.8   0.2    1.6  1  DUF2458   Protein of unknown function (DUF2458)
      0.033   13.7   0.4      0.092   12.2   0.0    1.9  2  DUF2884   Protein of unknown function (DUF2884)
      0.033   14.6   3.2      0.093   13.1   3.2    1.8  1  DUF1771   Domain of unknown function (DUF1771)


Domain annotation for each model (and alignments):
>> Smr  Smr domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   0.0   1.7e-10   6.2e-07       1      58 [.     416     482 ..     416     497 .. 0.82

  Alignments for each domain:
  == domain 1  score: 29.7 bits;  conditional E-value: 1.7e-10
                 EE-TT--HHHHHHHHHHHHHHHHHTT.......-SEEEEE--STTSTT..HCHHHHHHHHHHHCSTT CS
         Smr   1 lDLhglrraealnvletfldaasakg.......lrsvevihGkGahag..vgvLrpavmgwLagkea 58 
                 lDLhg ++ ea++++e+ +    ak+       ++ +++i+G G+h+   +++L p + +wL+++ +
  EPX71771.1 416 LDLHGATVREAKSIVEERVSSWWAKEadsspncIHPFRIITGIGNHSVgmEARLLPSIVRWLQQNGW 482
                 8********************666544455555*************6668*************9933 PP

>> DUF4224  Domain of unknown function (DUF4224)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.67   2.4e+03       3      12 ..     192     201 ..     192     212 .. 0.76
   2 ?   12.0   0.1   4.1e-05      0.15      20      36 ..     474     489 ..     471     493 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.67
     DUF4224   3 tpeElaeLTG 12 
                 t+eEla+ T 
  EPX71771.1 192 TDEELAQFTA 201
                 8999999885 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 4.1e-05
     DUF4224  20 akwLranGipfvvradG 36 
                 ++wL++nG++f v++ G
  EPX71771.1 474 VRWLQQNGWRFEVNH-G 489
                 79***********65.4 PP

>> DUF2458  Protein of unknown function (DUF2458)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.2     2e-05     0.071      57     109 ..      56     108 ..      46     141 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2e-05
     DUF2458  57 reekkkkldevlkslggavtekkessteeekeaeLeeyDkkvykaskeMskal 109
                 ++ +++k +e+l+sl  ++++++e++ +ee  + L + D+ vy+  ++M +++
  EPX71771.1  56 QSTTREKENEILHSLDDEFNKEHEVDYSEELTNSLYDLDETVYNFLRSMFHDI 108
                 56778999*****************************************8876 PP

>> DUF2884  Protein of unknown function (DUF2884)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1       0.8   2.9e+03      82     101 ..      85     104 ..      55     138 .. 0.58
   2 ?   12.2   0.0   2.6e-05     0.092      87     148 ..     206     267 ..     201     277 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 0.8
     DUF2884  82 evltellgedsevaeklktk 101
                 e  ++l + d++v++ l+++
  EPX71771.1  85 ELTNSLYDLDETVYNFLRSM 104
                 33344444444444444444 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 2.6e-05
     DUF2884  87 llgedsevaeklktkldelkarvkekfykdgdklvlgaqslesldeafdkefeqeieelvee 148
                 +  ++++ +ek+++ ld  ++rv+ +fyk +++l++  ++l      ++++fe+  ++ ++e
  EPX71771.1 206 FWERNQQLFEKISSILDIANSRVSHEFYKHSGSLYFTVNALLRKHPLLTETFEKSCQDTASE 267
                 56778999**********************************99999999999998887776 PP

>> DUF1771  Domain of unknown function (DUF1771)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   3.2   2.6e-05     0.093       6      50 ..     349     398 ..     345     410 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 2.6e-05
     DUF1771   6 aeAdeharkrnelfekAaeAyrrGd.....gaaAkelseqGkehgekmee 50 
                 + Ade+ + rn  ++++a+ yrr       g++A+++++ G+++ ek+ +
  EPX71771.1 349 RLADEYLDYRNAEYAASARDYRRSRsdrllGGSAAYHAQVGRQYHEKAMK 398
                 689*********************99*********************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (502 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       912  (0.0508673); expected 358.6 (0.02)
Passed bias filter:                      480  (0.0267723); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.58u 0.29s 00:00:00.86 Elapsed: 00:00:00.46
# Mc/sec: 3284.79
//
Query:       EPX71772.1  [L=266]
Description: FAD synthetase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.8e-35  121.5   0.0    1.5e-33  116.3   0.0    2.1  1  PAPS_reduct   Phosphoadenosine phosphosulfate reductase famil
  ------ inclusion threshold ------
       0.04   14.2   0.0      0.065   13.5   0.0    1.3  1  Init_tRNA_PT  Rit1 DUSP-like domain


Domain annotation for each model (and alignments):
>> PAPS_reduct  Phosphoadenosine phosphosulfate reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.3   0.0   1.6e-37   1.5e-33       1     174 []      49     211 ..      49     211 .. 0.96

  Alignments for each domain:
  == domain 1  score: 116.3 bits;  conditional E-value: 1.6e-37
                  CEEEE--SSCTCHHHHHHHHHHCTTH.............EEEEEE-STB-HHHHHHHHHHHHHTT-E.EEEEE-SCHHHHHHHHHH-S-THHHCHHHH CS
  PAPS_reduct   1 elvvsvsgGkdslVllhLalkafkpv.............pvvfvdtghefpetiefvdeleeryglr.lkvyepeeevaekinaekhgsslyeeaaer 84 
                  ++++s++gGkd+lVll L++ +++++             p+vfv+ ++ef+e+ +fv+ +e+ ygl+ + +  p++e                 a+  
   EPX71772.1  49 QIAMSFNGGKDCLVLLLLCIYCLRERygpslvkqklseiPFVFVRPKDEFDEMDKFVKSCEDLYGLNiIRISLPMKE-----------------AFTL 129
                  589**********************889***************************************8888888888.................4455 PP

                  HHTHHHHHHHHHCTTECEEE----CCCTTTTTTSSSEEECTTT-SCEEE-CCCT--HHHHHHHHHHCT--B-CCCCTT-SS--BCTTB-S CS
  PAPS_reduct  85 iaKveplkkaLekldedalltGaRrdesksraklpiveidedfekslrvfPllnWteedvwqyilrenipynpLydqgfrsiGcvpctga 174
                  + K++p  +        a+l+G+Rr +++ + ++++  +d+ ++k++r++P+l+W++ +vw+++l+++++y+ Lyd+g++s+G+v+ t++
   EPX71772.1 130 FLKLNPSIE--------AILIGIRRLDPHGKNRIAFEMTDKGWPKFMRIQPILDWKYSEVWDLLLETETKYCTLYDKGYTSLGGVSDTSP 211
                  99*******........********************************************************************99986 PP

>> Init_tRNA_PT  Rit1 DUSP-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   7.3e-06     0.065      15      61 ..      25      71 ..      13      90 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 7.3e-06
  Init_tRNA_PT 15 knLrtalpkivdfvrkrlsedkkkkilvacetGkdlsvgvaLailck 61
                  + L+++l   ++f+   l + ++++i ++ + Gkd  v ++L+i+c 
    EPX71772.1 25 SVLKQKLTGSLKFIDYALDRYETSQIAMSFNGGKDCLVLLLLCIYCL 71
                  56899999999*******999999*********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       497  (0.0277205); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.32s 00:00:00.83 Elapsed: 00:00:00.50
# Mc/sec: 1606.50
//
Query:       EPX71773.1  [L=1265]
Description: chromatin-remodeling complex ATPase chain Iswi [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      5e-55  186.6   0.0    8.8e-55  185.8   0.0    1.3  1  SNF2_N         SNF2 family N-terminal domain
    5.6e-20   71.8   0.0      2e-18   66.7   0.0    2.6  2  Helicase_C     Helicase conserved C-terminal domain
    1.7e-11   44.4   0.4    7.9e-11   42.2   0.0    2.4  3  ResIII         Type III restriction enzyme, res subunit
    8.7e-06   25.1   0.0    2.1e-05   23.9   0.0    1.6  1  ERCC3_RAD25_C  ERCC3/RAD25/XPB C-terminal helicase
  ------ inclusion threshold ------
      0.028   14.7   0.1       0.67   10.2   0.1    2.5  2  T2SSE_N        Type II secretion system (T2SS), protein E, N-


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  185.8   0.0   2.5e-58   8.8e-55      56     348 ..     612     901 ..     596     903 .. 0.88

  Alignments for each domain:
  == domain 1  score: 185.8 bits;  conditional E-value: 2.5e-58
                 --EEE---TTS--HHHHHHHHH...HHTTTS---.......S-EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH-----------------EEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  56 rGGiLaDemGLGKTvqvlalilaqrakeekdkekkrkdtlagptLivvPaslldqWeneierhvsssalrvlvyggqkkmkkkntkvapklladydvvi 154
                   GiLaDemGLGKT qv+a+ +     e+          + gp+L+vvP+s+l++W +e++r++++ +++ +++++q+  +   ++  ++   +yd+++
  EPX71773.1 612 LSGILADEMGLGKTCQVVAFFA--LLLEQ---------GRTGPHLVVVPSSTLENWLRELARFCPRLRVEPYYGSQQE--RADIREAIEENNVTYDILV 697
                 68******************99..22223.........3359******************************999987..455568999999******* PP

                 E-HHHHHHHT......TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHHHHHHH-TTTT--.HHHHHHHTHHHHH.. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxx.. RF
      SNF2_N 155 ttYdvlsreaelqkkrsvlkqvewkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledlygLlkfLreepfge.kqtfdkllqrpie.. 250
                 ttY+   + +   + rs lk ++ +  v DEgh lkn  s+ ++ + +L ++ r++ltGTP+qn+l++l++Ll+f+ +++f++  +  d  ++ + +  
  EPX71773.1 698 TTYQLATSSK---EDRSFLKHQNFDVCVYDEGHYLKNRMSERYKNLMNLTANFRLLLTGTPLQNNLKELVSLLAFILPNMFDSdMEDLDVIFKAKPTad 793
                 ****999777...79************************999999999**********************************98887777777666667 PP

                 ......HHHHHHHHHHHTT-STTEE---GGGT--S---EEEEEEEEE--HHHHHHHH....................HHHHHH-HH.H-...HHHHHHH CS
                 ......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xx...xxxxxxx RF
      SNF2_N 251 ......aqaekgrsrLlqllqrlmlrrakkdveknlPpkteeiiflklskverksYnrllevlrkkalakllkrseaalksssksk.ek...ilellle 339
                         +++++sr  +++ +++lrr+k++v  +lP+k+ +i +++ls++++ +Ynr+  v+  + l+   kr + a k++ ++   k   + ++l++
  EPX71773.1 794 adieqaLLSKQRISRAKTMMTPFVLRRRKAQVLGDLPQKSHYIEYCDLSAEQEAIYNRYAAVQKSQQLKREDKRPKKAKKDEGNEAnDKpasVGHTLMQ 892
                 77888777889999999****************************************988888888888877777766666665543338888899*** PP

                 HHHHHH--- CS
                 xxxxxxxxx RF
      SNF2_N 340 lrqacnhpq 348
                 lr+a nh  
  EPX71773.1 893 LRKAANHAL 901
                 *****9975 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0     0.068   2.4e+02      14      77 ..     639     703 ..     627     726 .. 0.69
   2 !   66.7   0.0   5.6e-22     2e-18       2     111 .]     970    1082 ..     969    1082 .. 0.93

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.068
                 TTTSEEEEEESSHHHHHHHHHHHHHT....TSTEEEESTTSTHHHHHHHHHHHH..TTSSSEEEESGGGT CS
  Helicase_C  14 eeggkilifvntidrlekvklllekk....gikvavlhgelpqnereeileqfn..kgesdvLiatdvae 77 
                  ++g  l++v++ + le  ++l+e       ++v +++g  +q+er +i e+    + ++d+L++t  ++
  EPX71773.1 639 GRTGPHLVVVPSST-LE--NWLRELArfcpRLRVEPYYG--SQQERADIREAIEenNVTYDILVTTYQLA 703
                 45555566666655.33..33322222366899999999..78888888877764367788999997665 PP

  == domain 2  score: 66.7 bits;  conditional E-value: 5.6e-22
                  HHHHHHHHH.HHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH.TTSSS.EEEESGGGTSSSTSTTESEEEESSSSS CS
  Helicase_C    2 kleallell.kleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfn.kgesd.vLiatdvaerGidipkvnlVinfdlpr 95  
                  k+++l++++ +++e+g++il+f++++++l+ ++ +l + +i++++l+g+++ + r++i++qf  + +++ +L++t++++ Gi++ ++n+Vi +d+ +
  EPX71773.1  970 KILKLKKMIpEMKEKGDRILLFSQFTQMLDILEQVLDTLKISYVRLDGSTQVETRQDIIDQFHrEPDVTvFLLSTRAGGFGINLACANVVILYDCSY 1066
                  788889998999*****************88777777779**********************86788888*************************** PP

                  SHHHHHHHHTTSSSTT CS
  Helicase_C   96 nvtsyiqriGRtgRag 111 
                  n+ +  q+ +R++R+g
  EPX71773.1 1067 NPFDDLQAEDRAHRVG 1082
                  **************87 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.2   0.0   2.2e-14   7.9e-11      27     169 ..     614     755 ..     591     757 .. 0.80
   2 ?   -2.5   0.1       1.2   4.3e+03     112     112 ..     938     938 ..     884    1031 .. 0.63
   3 ?   -2.9   0.4       1.6   5.7e+03     106     106 ..    1147    1147 ..    1078    1207 .. 0.57

  Alignments for each domain:
  == domain 1  score: 42.2 bits;  conditional E-value: 2.2e-14
                 EEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG.........GEEEESSS-B--.........-SEEEEEHHHHHHTH CS
      ResIII  27 glikmaTGtGKTlvaaklierllkkgkeekflflvprkslleqtleefkkflseayke.....igkkvsgdkkka..kekdstnkkilvttiqsldads 118
                 g+++ + G GKT   +++ + ll++g+    l++vp+ +l e +l+e+++f +  + e     +++  +     +   e+++ + +ilvtt+q +++++
  EPX71773.1 614 GILADEMGLGKTCQVVAFFALLLEQGRTGPHLVVVPSSTL-ENWLRELARFCPRLRVEpyygsQQERADI----ReaIEENNVTYDILVTTYQLATSSK 707
                 6777889******************************987.78999999998887655544322222222....23345778899********999999 PP

                 ........HHHTTT-SEEEEETGGGTTS...TTTHHHHHT---SEEEEEESS- CS
      ResIII 119 eeeeeeseellrdrfdviiiDEaHrlgak..kswreilekfkeavllglTATp 169
                     e++  l++++fdv + DE H l+    + ++++++   ++++l lT+Tp
  EPX71773.1 708 ----EDRSFLKHQNFDVCVYDEGHYLKNRmsERYKNLMNL-TANFRLLLTGTP 755
                 ....7888889999*************9866699996655.88*********9 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.2
                 H CS
      ResIII 112 q 112
                 +
  EPX71773.1 938 E 938
                 2 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 1.6
                  E CS
      ResIII  106 i 106 
                   
  EPX71773.1 1147 K 1147
                  1 PP

>> ERCC3_RAD25_C  ERCC3/RAD25/XPB C-terminal helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.0   5.9e-09   2.1e-05      43     130 ..     968    1061 ..     948    1084 .. 0.82

  Alignments for each domain:
  == domain 1  score: 23.9 bits;  conditional E-value: 5.9e-09
  ERCC3_RAD25_C   43 pnkfracefLikyhekrgDkiivfsDnvfa...Lkeyakklkkpyi..yGetseaerlkilqkfkknpkvntifls.kvgDtsiDlPeanvliq 130 
                     + k+  ++ +i   +++gD+i++fs        L+++  +lk  y+   G+t+ + r++i+++f+++p+v + +ls + g   i+l  anv+i 
     EPX71773.1  968 SGKILKLKKMIPEMKEKGDRILLFSQFTQMldiLEQVLDTLKISYVrlDGSTQVETRQDIIDQFHREPDVTVFLLStRAGGFGINLACANVVIL 1061
                     5566666677777889********9866551116677777888886337**********************99999568999**********95 PP

>> T2SSE_N  Type II secretion system (T2SS), protein E, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0       0.1   3.6e+02      61     100 ..     645     687 ..     631     692 .. 0.71
   2 ?   10.2   0.1   0.00019      0.67      66     105 ..    1067    1108 ..    1064    1112 .. 0.91

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.1
     T2SSE_N  61 lvavvdPldlaaldelqrllgkkgvkpvlatks...didalld 100
                 lv+v + + + +l+el+r+ ++++v+p   +++   di+++++
  EPX71773.1 645 LVVVPSSTLENWLRELARFCPRLRVEPYYGSQQeraDIREAIE 687
                 566667777999**************65555431116666665 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00019
     T2SSE_N   66 dPld.laaldelqrllgkkgvk.pvlatksdidalldrlygs 105 
                  +P+d l+a d+  r+ ++++v+ ++l+tk+ ++++++rl ++
  EPX71773.1 1067 NPFDdLQAEDRAHRVGQMRDVRvIRLITKNTVEEYIQRLANT 1108
                  78777*********************************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1265 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1329  (0.0741257); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.90u 0.27s 00:00:01.17 Elapsed: 00:00:00.46
# Mc/sec: 8190.52
//
Query:       EPX71774.1  [L=85]
Description: vacuolar H-ATPase assembly protein Vma21 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      1e-12   48.0   8.0    1.5e-12   47.5   8.0    1.2  1  VMA21         VMA21-like domain
  ------ inclusion threshold ------
      0.017   15.4   0.1      0.017   15.4   0.1    1.1  1  DUF1772       Domain of unknown function (DUF1772)
      0.021   13.2   0.3      0.024   13.0   0.3    1.1  1  Silic_transp  Silicon transporter
       0.11   12.8   0.0       0.17   12.1   0.0    1.3  1  COX7C         Cytochrome c oxidase subunit VIIc


Domain annotation for each model (and alignments):
>> VMA21  VMA21-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.5   8.0   3.2e-16   1.5e-12       3      64 .]      16      70 ..      14      70 .. 0.95

  Alignments for each domain:
  == domain 1  score: 47.5 bits;  conditional E-value: 3.2e-16
       VMA21  3 ikkLllfsllmvtlPlasfftskhllfegvfglsnssatlysgvlAVivvnlvlasYiivAf 64
                + k+++fs++++tlPl++++++ +  f+g       + t+y+g++A++++n+vl +Y+ivAf
  EPX71774.1 16 LIKFVGFSIALFTLPLLTYYWTLKNWFSG-------NGTIYAGIAAAVAANIVLTLYVIVAF 70
                78********************9999997.......78***********************8 PP

>> DUF1772  Domain of unknown function (DUF1772)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   0.1   3.8e-06     0.017      41      87 ..      22      69 ..       9      85 .] 0.64

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 3.8e-06
     DUF1772 41 p.lallsalafayla.araasrgarllylaaaallllsivpyTllvmvP 87
                + +al ++ +++y++  + + +g+  +y+++aa+ +++ +++Tl+v+v 
  EPX71774.1 22 FsIALFTLPLLTYYWtLKNWFSGNGTIYAGIAAA-VAANIVLTLYVIVA 69
                3344444444444446677778899999676666.44699******997 PP

>> Silic_transp  Silicon transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.3   5.2e-06     0.024     227     276 ..      25      72 ..       3      75 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 5.2e-06
  Silic_transp 227 vllslavlcfalavtlkalfnGkttmwesipegvavvlfflllsvvGlle 276
                    l++l +l++    tlk  f G+ t++ +i+ +va  +++ l  +v +le
    EPX71774.1  25 ALFTLPLLTY--YWTLKNWFSGNGTIYAGIAAAVAANIVLTLYVIVAFLE 72 
                   3333443333..469********************************998 PP

>> COX7C  Cytochrome c oxidase subunit VIIc
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   3.8e-05      0.17      38      63 ..      14      39 ..       6      40 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 3.8e-05
                HHHHHHHHHHHHHHHHHHHHHHHHHT CS
       COX7C 38 pfavkywgflgvgFalPFlavrwQlk 63
                  ++k++gf +  F lP l+ +w lk
  EPX71774.1 14 HILIKFVGFSIALFTLPLLTYYWTLK 39
                6789*******************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       609  (0.0339673); expected 358.6 (0.02)
Passed bias filter:                      312  (0.017402); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.40u 0.27s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 594.72
//
Query:       EPX71775.1  [L=238]
Description: Sim4 and Mal2 associated protein 7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.1e-16   60.1   7.1    4.9e-16   59.4   7.1    1.3  1  CENP-Q         CENP-Q, a CENPA-CAD centromere complex subunit
  ------ inclusion threshold ------
       0.31   11.3   8.4       0.07   13.4   1.7    2.5  2  KxDL           Uncharacterized conserved protein
       0.75    8.6   2.3       0.75    8.6   2.3    1.1  1  LMBR1          LMBR1-like membrane protein
       0.76   10.5  11.2        2.9    8.6   0.8    2.7  3  DUF573         Protein of unknown function, DUF573
        1.4    9.0   4.5        2.4    8.2   4.5    1.5  1  Vma12          Endoplasmic reticulum-based factor for assembl
        1.5    9.7   9.7        5.5    7.9   1.4    2.8  2  PAPA-1         PAPA-1-like conserved region


Domain annotation for each model (and alignments):
>> CENP-Q  CENP-Q, a CENPA-CAD centromere complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.4   7.1   1.7e-19   4.9e-16       3     168 .]      64     221 ..      62     221 .. 0.81

  Alignments for each domain:
  == domain 1  score: 59.4 bits;  conditional E-value: 1.7e-19
      CENP-Q   3 lrkLarlpfPpatqsdggkekeldfeklldekaaleaqLspelhslelLeaeiekeeralerdyeaLreLeknakaearerkeklkkehvllqesdsee 101
                 +  L++lp+Pp       k  +  f ++l ++++le+qL   l++++lL++e++ e   le++++a +++++n ++++++ +  + k+h+ll++s +e 
  EPX71775.1  64 NISLKTLPVPP------SKVGSGAFSQVLTANNQLERQLYGDLDHIHLLQKELDIESMRLEQEQKAYEQMKQNLSSNQARSRNMKNKLHPLLKSSTTE- 155
                 557999*****......7888999********************************************************99999*******944333. PP

      CENP-Q 102 lslleassdevlgea..sgtvfsdlepeldeellpllqqLgshLesmrgnlaqlegllpalerskaaLq 168
                   l +  + e++        ++s+++ e+  e++  +++L+    ++  +++q+ +l+++++++  +Lq
  EPX71775.1 156 PWLGNITDLEKR--DfpGLLSSSTKAYETKAEIKY-SKKLQPFIRTLHRHTSQTVQLSQKVQKATLLLQ 221
                 322222222222..233444444444455666655.999999999999999******999999988886 PP

>> KxDL  Uncharacterized conserved protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   1.7   2.3e-05      0.07      36      78 ..     103     145 ..      82     147 .. 0.91
   2 ?    1.2   0.6      0.15   4.4e+02      17      38 ..     205     226 ..     179     235 .. 0.62

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 2.3e-05
        KxDL  36 nalsqerlaklrarfkqgtkllkevkkdLesifkkirslkakl 78 
                 ++l+q++l   + r++q +k+  ++k++L s + + r++k kl
  EPX71775.1 103 IHLLQKELDIESMRLEQEQKAYEQMKQNLSSNQARSRNMKNKL 145
                 678899999999*****************************98 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.15
        KxDL  17 lQaqtsgrlnkknreLlelnal 38 
                 +  q+s++ +k +  L+++++ 
  EPX71775.1 205 QTVQLSQKVQKATLLLQRFQQR 226
                 3334555555555555555443 PP

>> LMBR1  LMBR1-like membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   2.3   0.00025      0.75     195     301 ..      93     216 ..      17     236 .. 0.75

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00025
       LMBR1 195 ksdldeelkklyfeaaklntekeeaereledllkevkklrksisesdplrkyleeilk.....................kvPeeiaeklksnenktees 272
                 +++l  +l+++      l++e++    +le+  k+ +++++++s+++ +++++++ l+                      +P  +++ +k+ e+k+e +
  EPX71775.1  93 ERQLYGDLDHI----HLLQKELDIESMRLEQEQKAYEQMKQNLSSNQARSRNMKNKLHpllkssttepwlgnitdlekrDFPGLLSSSTKAYETKAEIK 187
                 45555555555....556666666666677666677777777777775556666666666667777777777777999988888888888877776666 PP

       LMBR1 273 laklekqlikalqkrertekqwkrlleka 301
                  +k  +  i++l+++  +  q+++ ++ka
  EPX71775.1 188 YSKKLQPFIRTLHRHTSQTVQLSQKVQKA 216
                 66666799999999999999999999999 PP

>> DUF573  Protein of unknown function, DUF573
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1       1.8   5.4e+03      48      63 ..       9      24 ..       2      34 .. 0.62
   2 ?    8.5   0.6     0.001         3       3      59 ..      95     148 ..      93     152 .. 0.83
   3 ?    8.6   0.8   0.00095       2.9      20      70 ..     180     230 ..     171     238 .] 0.80

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 1.8
      DUF573 48 sksqlseKlrrLkkky 63
                +k+++  K r L +k 
  EPX71775.1  9 RKEEIRRKWRPLSEKQ 24
                5566666666665553 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.001
      DUF573   3 rlWseeDEielLqglldfksktgtspksdldafyeavksslssdvsk.sqlseKlrrL 59 
                 +l+ + D i lLq+ ld +s + +    + ++ ye++k++lss+    +++++Kl+ L
  EPX71775.1  95 QLYGDLDHIHLLQKELDIESMRLE----QEQKAYEQMKQNLSSNQARsRNMKNKLHPL 148
                 567788***********9885554....6899*********99776668999998765 PP

  == domain 3  score: 8.6 bits;  conditional E-value: 0.00095
      DUF573  20 fksktgtspksdldafyeavksslssdvsksqlseKlrrLkkkyrnavski 70 
                 +++k + + +++l+ f+ ++++ +s+ v+ sq ++K   L +++++ +s  
  EPX71775.1 180 YETKAEIKYSKKLQPFIRTLHRHTSQTVQLSQKVQKATLLLQRFQQRMSVG 230
                 555555554599*********************************988764 PP

>> Vma12  Endoplasmic reticulum-based factor for assembly of V-ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   4.5   0.00082       2.4      27      57 ..     112     142 ..     107     218 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00082
       Vma12  27 larLraeqeereYkrlinsvdpsqksgktds 57 
                 ++++r eqe+++Y+++ ++ +++q+++ +++
  EPX71775.1 112 IESMRLEQEQKAYEQMKQNLSSNQARSRNMK 142
                 6899***************998888877776 PP

>> PAPA-1  PAPA-1-like conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   1.4    0.0018       5.5       3      24 ..       7      28 ..       6      54 .. 0.86
   2 ?    5.7   1.6    0.0087        26      47      85 ..     174     212 ..     105     213 .. 0.77

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0018
                XXHHHHHHHHHHHHHHHHHHHH CS
      PAPA-1  3 alrraEmarrRknqsekrleee 24
                a+r++E  r+ + +sek+ ee 
  EPX71775.1  7 AVRKEEIRRKWRPLSEKQHEEM 28
                89******************95 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0087
                 XXXXXXXXXXXXXXXXXX--S-EEEEE-SS-EEEE--GG CS
      PAPA-1  47 kaaaeaeeeeeeaeeaerpapliRwvsnkdGsvlavpee 85 
                 +++++a e+++e +++++ +p+iR+ ++ + +++ ++++
  EPX71775.1 174 SSSTKAYETKAEIKYSKKLQPFIRTLHRHTSQTVQLSQK 212
                 445566777778899999*************99998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1704  (0.0950416); expected 358.6 (0.02)
Passed bias filter:                      576  (0.0321267); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 1632.46
//
Query:       EPX71776.1  [L=538]
Description: Set3 complex subunit Hif2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.2e-24   86.4   0.1    0.00013   22.2   0.0    5.7  5  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    2.5e-22   78.8  12.3     0.0076   17.1   0.1    8.1  8  WD40         WD domain, G-beta repeat
    4.7e-08   33.1   0.4     0.0039   17.1   0.1    3.7  4  eIF2A        Eukaryotic translation initiation factor eIF2A
     0.0024   17.3   1.6      0.081   12.2   1.6    2.5  1  Nbas_N       Neuroblastoma-amplified sequence, N terminal
     0.0059   16.0   0.2      0.022   14.1   0.2    2.1  1  WD40_like    WD40-like domain


Domain annotation for each model (and alignments):
>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   0.0   3.4e-05      0.12      35      71 ..     233     269 ..     205     279 .. 0.84
   2 !   15.4   0.0   4.7e-06     0.017      36      90 ..     275     327 ..     267     329 .. 0.89
   3 !   22.2   0.0   3.5e-08   0.00013       8      91 ..     330     414 ..     325     415 .. 0.88
   4 !   11.7   0.0   6.6e-05      0.24      37      81 ..     446     490 ..     431     496 .. 0.86
   5 !   18.9   0.0   3.9e-07    0.0014      29      71 ..     492     534 ..     488     537 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 3.4e-05
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlldaesgk 71 
                  + e++ v+++aW+++g  +a ++ +g+++l++ +  +
   EPX71776.1 233 NVESQDVTCIAWSHSGAYFACSFFNGSIELFNDYGSQ 269
                  678899************************9877554 PP

  == domain 2  score: 15.4 bits;  conditional E-value: 4.7e-06
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  +++s v  L+W+  ++ +a + +dg v l+d  +  +v  l++ s+  v  ++W 
   EPX71776.1 275 ETESPVLTLKWSATDTYIAAGSADGGVVLYDCLKRSLVYFLDTCSS--VLDIEWI 327
                  68899*********************************99998888..8999996 PP

  == domain 3  score: 22.2 bits;  conditional E-value: 3.5e-08
  ANAPC4_WD40   8 DLiAlatedgellvfRl.ngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrllda...esgkvvhslsvksekavtclgWge 91 
                  D + +a +dg+l +f + n + ++++  +++++++ sL+++p   lL  + sd +v+l +    es +++h+++ +s   + c+gW+e
   EPX71776.1 330 DAFVIADADGNLKIFNIgNKNPIFSI-VKAHEESILSLRYHPHFLLLISSSSDATVKLWSQsncESLQCMHTFPFNSP--IECIGWNE 414
                  77789999*******998999*****.79999**************************9761116678999*****99..******86 PP

  == domain 4  score: 11.7 bits;  conditional E-value: 6.6e-05
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  + s ++s++++++g+lLa + s g++ + d +   ++++l  k++
   EPX71776.1 446 HASPITSISFSNNGRLLATGDSIGSLCIWDCKLSSLIQELVPKNS 490
                  6789**************************999999988877665 PP

  == domain 5  score: 18.9 bits;  conditional E-value: 3.9e-07
  ANAPC4_WD40  29 vwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgk 71 
                  + t++++++++++++L+W+pd+k L v+ +  e+ ++ ++++k
   EPX71776.1 492 IATFANNESEEQINCLKWSPDDKHLIVGKQTQELVICTVSDKK 534
                  667789999****************************999887 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0      0.55     2e+03      10      23 ..     193     205 ..     187     219 .. 0.79
   2 !   16.8   0.1   2.6e-06    0.0093      11      38 .]     237     264 ..     223     264 .. 0.78
   3 !   12.4   0.0   6.5e-05      0.23       7      38 .]     273     305 ..     267     305 .. 0.84
   4 ?    4.7   0.1     0.018        63      11      38 .]     319     345 ..     309     345 .. 0.78
   5 !   16.5   0.0   3.2e-06     0.012       6      38 .]     355     388 ..     350     388 .. 0.88
   6 ?    2.2   0.0       0.1   3.7e+02       2      17 ..     396     411 ..     395     433 .. 0.80
   7 !   17.1   0.1   2.1e-06    0.0076       9      38 .]     445     475 ..     437     475 .. 0.84
   8 !    8.7   0.0   0.00098       3.5      12      28 ..     501     519 ..     490     534 .. 0.79

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.55
                 SSSEEEEEEETTSS CS
        WD40  10 Hssvtslafspdga 23 
                 H  vt+ +++p ++
  EPX71776.1 193 H-AVTCADWQPTNP 205
                 6.69***9999876 PP

  == domain 2  score: 16.8 bits;  conditional E-value: 2.6e-06
                 SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  11 ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++vt++a+s++ga++a++  +g++ +++
  EPX71776.1 237 QDVTCIAWSHSGAYFACSFFNGSIELFN 264
                 35*************98867****9986 PP

  == domain 3  score: 12.4 bits;  conditional E-value: 6.5e-05
                 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +    s+v  l++s   +++a+Gs Dg v ++d
  EPX71776.1 273 FQETeSPVLTLKWSATDTYIAAGSADGGVVLYD 305
                 555557899********************9998 PP

  == domain 4  score: 4.7 bits;  conditional E-value: 0.018
                 SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  11 ssvtslafspdgawlasGsdDgtvriWd 38 
                 ssv ++ + +  a+++ ++ Dg+++i++
  EPX71776.1 319 SSVLDIEWISTDAFVI-ADADGNLKIFN 345
                 5789998888888887.677******97 PP

  == domain 5  score: 16.5 bits;  conditional E-value: 3.2e-06
                 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 + ++H  s+ sl+++p+  +l+s+s D tv++W+
  EPX71776.1 355 IVKAHeESILSLRYHPHFLLLISSSSDATVKLWS 388
                 5689*999*************99978*******5 PP

  == domain 6  score: 2.2 bits;  conditional E-value: 0.1
                 EEEEEEESSSSEEEEE CS
        WD40   2 qclrtltGHssvtsla 17 
                 qc++t+   s++ ++ 
  EPX71776.1 396 QCMHTFPFNSPIECIG 411
                 8******9999***94 PP

  == domain 7  score: 17.1 bits;  conditional E-value: 2.1e-06
                 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  H s++ts++fs +g++la+G+  g++ iWd
  EPX71776.1 445 RHaSPITSISFSNNGRLLATGDSIGSLCIWD 475
                 59889****************6599999998 PP

  == domain 8  score: 8.7 bits;  conditional E-value: 0.00098
                 S..EEEEEEETTSSEEEEE CS
        WD40  12 s..vtslafspdgawlasG 28 
                    +++l++spd + l+ G
  EPX71776.1 501 EeqINCLKWSPDDKHLIVG 519
                 256************8866 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.1   1.1e-06    0.0039      54     159 ..     189     293 ..     179     298 .. 0.81
   2 !    5.5   0.0    0.0038        14      57     139 ..     275     353 ..     268     390 .. 0.60
   3 !    9.6   0.0   0.00022      0.78      59     153 ..     404     497 ..     377     501 .. 0.79
   4 ?    2.2   0.0      0.04   1.4e+02     100     118 ..     501     519 ..     488     524 .. 0.68

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 1.1e-06
                 CCEESSS.EEEEEE-TTSS-EEEEESSSSCEEEEEEC....SCEEEEEEEEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETT.TTEEEEEEE-TT-- CS
       eIF2A  54 velkkegpihdvaWspkskefaviyGkmpakvslfdl....kvkviskleeqkrNtiffspkgklvllaGfgnlaGeleiwdvk.kkkkiakaeaanat 147
                 ++++++  + ++ W+p++ e  v+ G m+a+ s+ +     k    s++e+q   +i +s +g +++ + f   +G++e+++   + + i +  ++   
  EPX71776.1 189 ISMRHA--VTCADWQPTNPEKFVV-GMMNADLSICKFgddpKTFYGSNVESQDVTCIAWSHSGAYFACSFF---NGSIELFNDYgSQQVIFQETESPVL 281
                 555554..8999***998776655.9****99987764434577778999***************998765...79****9999788888888899999 PP

                 EEEE-TTSSEEE CS
       eIF2A 148 lvewspdgryvl 159
                 +++ws +++y++
  EPX71776.1 282 TLKWSATDTYIA 293
                 9*********97 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.0038
                 ESSS.EEEEEE-TTSS-EEEEESSSSCEEEEEEC.SCEEEEEEEEES-.-EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEE CS
       eIF2A  57 kkegpihdvaWspkskefaviyGkmpakvslfdl.kvkviskleeqkr.NtiffspkgklvllaGfgnlaGeleiwdvkkkkkia 139
                 ++e p+  ++Ws + +  ++  G ++  v+l+d  k ++++ l++ +    i + +++ +v+     +  G+l+i++  +k+ i 
  EPX71776.1 275 ETESPVLTLKWSATDT--YIAAGSADGGVVLYDClKRSLVYFLDTCSSvLDIEWISTDAFVIA----DADGNLKIFNIGNKNPIF 353
                 4566777788876554..566788888888888755666666666543146777777777764....445555677766555544 PP

  == domain 3  score: 9.6 bits;  conditional E-value: 0.00022
                 SS.EEEEEE-TTSS-EEEEES.SSSCEEEEEEC...SCEEEEEEEEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-TT--EEEE-T CS
       eIF2A  59 egpihdvaWspkskefaviyG.kmpakvslfdl...kvkviskleeqkrNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakaeaanatlvewsp 153
                 + pi ++ W++ s     i G  +++ +sl++    +   +++ ++++  +i fs++g+l++++   +  G+l iwd k  + i+++  +n++   + +
  EPX71776.1 404 NSPIECIGWNEGSGS--PIFGiASNSIISLYNAislQQLSVCMRHASPITSISFSNNGRLLATG---DSIGSLCIWDCKLSSLIQELVPKNSSIATFAN 497
                 668888888876654..2445357789*****965557778889999*************9985...566*********99999999999999888876 PP

  == domain 4  score: 2.2 bits;  conditional E-value: 0.04
                 EES--EEEE-TTSSEEEEE CS
       eIF2A 100 eqkrNtiffspkgklvlla 118
                 e++ N++++sp +k ++++
  EPX71776.1 501 EEQINCLKWSPDDKHLIVG 519
                 5566777777776666654 PP

>> Nbas_N  Neuroblastoma-amplified sequence, N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   1.6   2.2e-05     0.081     135     258 ..     348     476 ..     219     499 .. 0.65

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2.2e-05
      Nbas_N 135 qeshsfsfsshyshgitaaiyhpahrlllvggcesadagvskasscglsawrvlsgspyykqvt...syedd...vg..alakkrgllkllslklysrk 225
                 +++  fs+   + + i +  yhp h lll+     a + +   s+c   + + +   p+   +     +e     +   a++   +l++ +sl+  s  
  EPX71776.1 348 NKNPIFSIVKAHEESILSLRYHP-HFLLLISSSSDATVKLWSQSNC--ESLQCMHTFPFNSPIEcigWNEGSgspIFgiASNSIISLYNAISLQQLSVC 443
                 357789999999***********.6677777655555555555555..455555555555444311133322112321123456799999********* PP

      Nbas_N 226 aeekdgvfkmslspdgtllavihfsgklsiwdi 258
                  +    +  +s+s +g lla+    g+l+iwd 
  EPX71776.1 444 MRHASPITSISFSNNGRLLATGDSIGSLCIWDC 476
                 *******************************95 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.2   6.2e-06     0.022       2     153 ..     279     440 ..     278     529 .. 0.73

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 6.2e-06
   WD40_like   2 eiYsidiskkgslilyGgkddkctvlkleslesvsivesfedSvifvklldddlilvvtlDGtillsllenee.eveneki.eedistvkvidd.klli 97 
                 ++ ++  s   ++i+ G+ d  + +++     +v+ ++    Sv+ ++ ++ d ++++  DG++    + n++ + ++ k  ee i   ++     lli
  EPX71776.1 279 PVLTLKWSATDTYIAAGSADGGVVLYDCLKRSLVYFLDTC-SSVLDIEWISTDAFVIADADGNLKIFNIGNKNpIFSIVKAhEESILSLRYHPHfLLLI 376
                 5678889999*************************99986.59**************************999975566554155566666655413445 PP

   WD40_like  98 Gt.nkGsiyvfskdlqleevllgq....sseIkeikiennk...iysLsesafi.vfdlfsqnie 153
                  + +  ++ ++s+  ++e +   +    +s+I+ i  +++    i++++++  i  ++++s +++
  EPX71776.1 377 SSsSDATVKLWSQS-NCESLQCMHtfpfNSPIECIGWNEGSgspIFGIASNSIIsLYNAISLQQL 440
                 44134566667776.55554333312226777777666543223777766666634666665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (538 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       559  (0.0311785); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.63u 0.28s 00:00:00.91 Elapsed: 00:00:00.48
# Mc/sec: 3354.66
//
Query:       EPX71777.1  [L=748]
Description: exocyst complex subunit Sec6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.8e-134  448.2   3.6   5.3e-134  447.7   3.6    1.2  1  Sec6      Exocyst complex component Sec6
  ------ inclusion threshold ------
       0.11   12.8   1.4       0.38   11.1   1.4    1.9  1  HalX      HalX domain


Domain annotation for each model (and alignments):
>> Sec6  Exocyst complex component Sec6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  447.7   3.6  5.9e-138  5.3e-134       1     574 []     181     740 ..     181     740 .. 0.96

  Alignments for each domain:
  == domain 1  score: 447.7 bits;  conditional E-value: 5.9e-138
                 HHHHHHHHHHHHHHHHHHHHSTTSSSCHHHH....HHHHHHHHHHHHHCCCCS.----TT.--............-----HHHHHHH...HHHHHHHHH CS
        Sec6   1 fskvdkliekFdkllweiirslielvregntslvvrlvkiverEekeDeklealreltkk.ekdeedaanfr..arrprnykkkfle...aleesveer 93 
                 fs++++l+ekFd+l+ + +++l+el + gnt+++vr++ki+e+Ee++De l+ +r+++++  +  ++ a f   ++++r+ ++++ e    ++ sv+er
  EPX71777.1 181 FSNLNALSEKFDRLIFNYCSNLFELLKVGNTKTIVRVFKIIEAEEASDEMLKSIRNAQSNlTD--ANEAPFMnlQGSSRQLRNFWSEakeIFQASVAER 277
                 899*******************************************************99666..445555566577777777776632279******* PP

                 CTS--S---TT--HHHHH...HHHHHHHHHHHHCCCCCS-TTT-HHHHHHHHHHHHHHHHHHHHTTS---HHHHHHHHHHHHHHHH.HTTTSSHHHC.C CS
        Sec6  94 feeckekfseddkklellenldwlledLevVkdelaplfPpswkifktyvkiYhnklhdllqelvsseleaedilailewvkkYskklsklnpelefkk 192
                 f +++ +f  +++ le    l+w+++dL+ +++ l +l  ps+++ ++++ iY ++l +l+++ +ss+++a+ +l++++++k+Y+ + ++    + f+ 
  EPX71777.1 278 FHQAWSNFITQKADLE----LEWMFDDLQYAFKVLPELASPSFDLARVFAIIYQQCLVNLVKDSISSDTPAAIFLYLINFHKEYRAFYQE---HAPFSA 369
                 **********975455....89********************************************************************...577999 PP

                 CC---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT---..EESSSEE-CHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH CS
        Sec6 193 kelkpllldekkeeLledYlklivkkmkeWldnllktEvkkftereeppeededglyvlplpvdvfqmlaeqvdvaaeskqakilvgvleelsellksr 291
                 +e++p l+d+    L+++Y++l+++k++eW d+l+++ v++f++re++pe d+dg y  ++++++fqm+++qv++++++++  ++  vl++++ +++ +
  EPX71777.1 370 DEIQPSLEDGSNGVLVKEYTRLFTQKIQEWSDKLFQSSVEAFIKRESEPELDSDGNYGIQGTIIFFQMITQQVNIISQTNNPEVVSTVLRSIMYVMQAM 468
                 99************************************************************************************************* PP

                 HHHHHHHHHC-TTSTT.............HHHHHHHHHHHHHHHHH...HHHHHC.........---HHHHHHHHHHHHHHHHHHHHHHCHHHHCCTTC CS
        Sec6 292 qdawqelleeelkkymsvknnereeskpglveyliAlaNdqlkcadyaeslsskylelvsskyeeriteefeelldgfvdlskeaisalleiifnDLkp 390
                 q+ w+++++ el+k  s +n     ++pgl+eyl+AlaNd+lkca ++++++ ++ el +++ ee+++e+f +++dgf+ ls+ +++ ++eii nD+kp
  EPX71777.1 469 QEHWKTVMKTELQKHLSTSN-----TPPGLMEYLLALANDNLKCAGFMDNTLLRTFELATDSREEDLRESFGKTVDGFILLSDIGVNEIVEIISNDVKP 562
                 **************988888.....89*******************9999999999******************************************* PP

                 CCCHHHHTTTSSHHHHHHHHHHHHTTTTGGGS.S-HHHHHHHHHHHHHHHHHHHHHHHCSS----SHHHHHHHHHHHHHHHHHHHHHHHHTT-..---C CS
        Sec6 391 alsklftkkWytgelmeqivetiedYlndykeylspelfevlleelldelvveYlralrkkklkfaakkqkkfaekikrDaeklydffeklgseedaay 489
                 al +lf++ Wy+++ m+ iv+t++dY+ d+ e++ p lf+v+l e ++ l + Ylr + +k++ f   + ++++++i++D++ ++  f +++    a++
  EPX71777.1 563 ALATLFHPGWYQSSNMKLIVDTFRDYIVDCIEHMVPGLFDVFLLESSNALTINYLRGIYNKGVTF---EGPSAIQQIRSDIALAIRAFGEYMA---AEH 655
                 *****************************************************************...*************************...99* PP

                 CCCTTHHHH....HHHH--SHHHHHHHHHHHHHS-TT--HHHHHHHHHCCSS-STCHHHHHHHHTT---SS----....-SSCCCS CS
        Sec6 490 lkqklraie.lllelleledpdavplevetllesypdisedhveavlkaRkDldksevkelveqlkeikkevesavepprtifsrv 574
                 lk++++ ie lll++l++e   +v ++++ l+esy+d+++++ve +l  R+Dld+ +++++ve++++ ++++++  ++++tifs++
  EPX71777.1 656 LKATFEPIEkLLLGMLDAEL-GSVAEYFRLLKESYWDAPLSLVEVILTNRTDLDRGTIRKMVEIVRQENSNMQQYSSNKPTIFSQI 740
                 *********777********.******************************************************9999****986 PP

>> HalX  HalX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   1.4   4.2e-05      0.38       9      49 ..      21      58 ..      16      66 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 4.2e-05
        HalX  9 lqelfaLasKravLeaekseaeLadseeYqeLearleelra 49
                  +l+ L+s + +Le+ek+ ++L+    ++eLe   e+l++
  EPX71777.1 21 SEDLYKLSSHVEKLEREKDTFDLH---VKAELEKHSESLQR 58
                5689*******************5...58888888877776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (748 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       982  (0.0547716); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.26s 00:00:00.90 Elapsed: 00:00:00.41
# Mc/sec: 5443.36
//
Query:       EPX71778.1  [L=137]
Description: hypothetical protein SOCG_03715 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-34  118.7   0.1    1.5e-34  118.4   0.1    1.1  1  MPC       Mitochondrial pyruvate carriers


Domain annotation for each model (and alignments):
>> MPC  Mitochondrial pyruvate carriers
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.4   0.1   8.4e-39   1.5e-34      14     105 ..      34     125 ..      19     133 .. 0.89

  Alignments for each domain:
  == domain 1  score: 118.4 bits;  conditional E-value: 8.4e-39
         MPC  14 tvhFWaPvlkwglviaglsDlkrpaekiSltqnlaLlatgliwtryslvikPkNyllaavnfvlelvglvqvsRilkyrlskkdekkeakke 105
                 ++hFW+P +++g++ia++ Dlk++++ iS+++++aL+a++++++ry+++++P+Nyll ++++++ +v+ vq+ R++++++  +d++++ ++ 
  EPX71778.1  34 STHFWGPLSNFGIPIAAILDLKKDPQLISGQMTSALVAYSAVFMRYAWMVSPRNYLLLGCHAFNCTVQSVQGLRFVNFWYGYDDQRSAFENV 125
                 89*****************************************************************************9999887763333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       353  (0.0196888); expected 358.6 (0.02)
Passed bias filter:                      295  (0.0164538); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1056.17
//
Query:       EPX71779.1  [L=309]
Description: meiotically upregulated Mug46 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (309 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       794  (0.0442858); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2158.60
//
Query:       EPX71780.1  [L=534]
Description: hexose transporter Ght6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.5e-121  405.7  23.4     3e-121  405.5  23.4    1.0  1  Sugar_tr  Sugar (and other) transporter
    4.9e-19   68.5  26.4    2.3e-14   53.1  11.0    2.1  2  MFS_1     Major Facilitator Superfamily
    0.00014   20.6   1.9    0.00014   20.6   1.9    2.9  3  MFS_2     MFS/sugar transport protein
  ------ inclusion threshold ------
       0.16   10.4   5.0       0.23    9.8   5.0    1.2  1  MFS_3     Transmembrane secretion effector
       0.28   11.9   0.6       0.69   10.6   0.2    1.8  2  Pex14_N   Peroxisomal membrane anchor protein (Pex14p) conser


Domain annotation for each model (and alignments):
>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  405.5  23.4  8.3e-125    3e-121       3     452 .]      11     467 ..       9     467 .. 0.95

  Alignments for each domain:
  == domain 1  score: 405.5 bits;  conditional E-value: 8.3e-125
                 HHHHHHHHHHHHHHHCGGGTHHHHHHHHTST.T--SHHHHHH....HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTT CS
    Sugar_tr   3 lvaalggllfgYdtgvigafltllkfaknfg.lsksksskee.ssvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgk 99 
                 ++++++g +fg dtg ig+++++ +f++++   +  ++++++ ss ++gl+v+++++G +iG+l++++l+drfG++k+++  a++++ g+++q ++   
  EPX71780.1  11 VFVSMAGWMFGADTGSIGGITSMRDFQSRYAdRYDPVADTYSySSARQGLLVGMVNIGTTIGCLLSSPLADRFGKRKCIMGWALVYISGIIVQLTTV-- 107
                 67899********************9988764555555565579**************************************************999.. PP

                 SS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHHHHHHHHHHGGGS---HHHH CS
    Sugar_tr 100 nsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglglnktsnadgwrillglqlvpallllilllflPESPryl 198
                  s+ +++v+++ +G+++G+ sv++P y+sE Ap+++Rga+v+ yql+it+Gi++aa+++ g++k +++++wr+++g++l++ +l+++++lfl ESPryl
  EPX71780.1 108 PSWVQIMVAKIWTGLSIGALSVIAPGYQSESAPPQIRGAIVTTYQLFITAGIFIAACVNIGTQKRHGTTQWRVPIGINLLWGILMFLGMLFLKESPRYL 206
                 89************************************************************999999******************************* PP

                 HHTT-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH.........HTTHHHHSH...HHHHHHHHHHHHHHTTHHHHHHHTTTHHHHSS-THHHHHH CS
    Sugar_tr 199 vekgkeeeakevlaklrgeedadrelaeekdsleaeqeee....kaswkellssktvrqrlligvvlqifqqltGinaimyysptifenlglsksllvt 293
                  ++g+ ee  ++l +  g +++++ +++e+++++  +e+e       w e+++s  +r+r+l+g+++++fqqltG+n+++yy++++f+ +gl+ ++l++
  EPX71780.1 207 AMRGQNEECMQILCRNSGLTPDHPLMQKEYNAIQTDVEAEteggPCRWIEIFQS-PIRYRTLLGMAVMAFQQLTGNNYFFYYGTQVFRGTGLNSPFLAS 304
                 ***************9999***************99999988889999999999.67****************************************** PP

                 HHHHHHHHHHHHHHHHHHHHS-SHHHHHHHHHHHHHHHHHHH.....HHHHTTSS........CHHHHHHHHHHHHHHHTTTTHHHHHHHHHHSHTTTH CS
    Sugar_tr 294 iivgvvnfvatfvaiflvdrfGRRtllllGaagmaicfvilg...ivalllvaks.....kaasivaivfialfialfalgwgpvpwvlvsElfpqsvR 384
                 +i+ +vnf  tf aif+ ++fGRR+ l++G++ ++icf+i++          ++        a+ v+ivf +lfi++fa +w+p  +v+v E +p + R
  EPX71780.1 305 LILDAVNFGCTFGAIFVLEYFGRRNPLIFGGIWQSICFFIYAsvgD---RALTRPngtsnHRAGAVMIVFSCLFIFCFAQSWAPAAYVIVGESYPIRYR 400
                 ******************************************6432...3333333557799************************************* PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHT-HHHHHHHHHHHHHHHHHHHHS--STT--CCCCGGGT CS
    Sugar_tr 385 skalaiavavnwlanflisllfpiiteaigggyvflvfaglavlfiifvfffvpetkgrtleeieelf 452
                 sk++a+a+a+nw++nflis+++p+i ++ig ++++++fa++++ +++++f+f  etkg+tleei++l+
  EPX71780.1 401 SKCAAVATASNWFCNFLISFFTPFISNSIG-FKYGYLFASCNLTAAVIIFLFAKETKGLTLEEINQLY 467
                 ******************************.**********************************986 PP

>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.1  11.0   6.4e-18   2.3e-14      23     263 ..      47     320 ..       4     324 .. 0.70
   2 !   19.0  13.5   1.5e-07   0.00054       5     187 ..     274     465 ..     270     503 .. 0.74

  Alignments for each domain:
  == domain 1  score: 53.1 bits;  conditional E-value: 6.4e-18
       MFS_1  23 laedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfa.sslw.lllvlrvlqGlgagalfpagaaliadwfpkeer 119
                 +a+++ +s + +gll++++ +g+ ++ l+ ++l+drfG r++++  +l++++g ++  ++  ++w  ++v+ + +Gl  gal  ++  + ++ +p++ r
  EPX71780.1  47 VADTYSYSSARQGLLVGMVNIGTTIGCLLSSPLADRFGKRKCIMGWALVYISG-IIVQLTtVPSWvQIMVAKIWTGLSIGALSVIAPGYQSESAPPQIR 144
                 255577999********************************999999999999.444454466777********************************* PP

       MFS_1 120 graigllsagfslGailgpllggllasslg...Wravfyilaivsllafvlfllllpeepperkrkspkeee........................... 188
                 g  +  +++++ +G+ +++ +        g   Wr++  i+ + ++l+f+ ++l+l e+p+  +   + e e                           
  EPX71780.1 145 GAIVTTYQLFITAGIFIAACVNIGTQKRHGttqWRVPIGINLLWGILMFL-GMLFLKESPRYLAMRGQNE-Ecmqilcrnsgltpdhplmqkeynaiqt 241
                 ******************9999999999999*****************88.3466655555555554444.4599999999999999988888887766 PP

       MFS_1 189 .....kgtgpaplvpawkallkdpvlwillialllfffgfsglltllplylqevlgls.glllaglllallalvgailall 263
                         gp  +++++++  + + l+ + ++++   +g+++++++ +       gl+   +la+l+l ++ +++ ++a++
  EPX71780.1 242 dveaeTEGGPCRWIEIFQSPIRYRTLLGMAVMAFQQLTGNNYFFYYGTQV-FRGTGLNsP-FLASLILDAVNFGCTFGAIF 320
                 66655555666666644444444433333333333344444455554442.444444442.55555555555555555444 PP

  == domain 2  score: 19.0 bits;  conditional E-value: 1.5e-07
       MFS_1   5 aflsalarsilgpalpl.alaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllll.f...a.........sslw.ll 88 
                 af   ++ + ++   ++ + ++ l+ sp  ++l+l ++ +g+ ++++++      fGrr  l++g ++ ++++++ + +   a         +    ++
  EPX71780.1 274 AFQQLTGNNYFFYYGTQvFRGTGLN-SPFLASLILDAVNFGCTFGAIFVLE---YFGRRNPLIFGGIWQSICFFIYAsVgdrAltrpngtsnHRAGaVM 368
                 5555666666666666667777788.9999999999999999999988754...59****************555554444414555555454466668 PP

       MFS_1  89 lvlrvlqGlga.galfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpeepperkrkspke 186
                 +v+ +l  ++   + +pa+++++ + +p + r++  ++++a++ +   l   + ++++ s+g+ + ++++   +  a++   ++l++++++  + +++ 
  EPX71780.1 369 IVFSCLFIFCFaQSWAPAAYVIVGESYPIRYRSKCAAVATASNWFCNFLISFFTPFISNSIGFKYGYLFASCNLTAAVI---IFLFAKETKGLTLEEIN 464
                 888888888874556689999999****************************************997777776666655...56666665555555554 PP

       MFS_1 187 e 187
                 +
  EPX71780.1 465 Q 465
                 4 PP

>> MFS_2  MFS/sugar transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   1.9   3.8e-08   0.00014     264     334 ..      61     130 ..      50     136 .. 0.90
   2 ?    2.0   8.2     0.017        61     221     371 ..     262     420 ..     231     447 .. 0.68
   3 ?   -0.5   0.4     0.096   3.5e+02     272     309 ..     415     452 ..     398     461 .. 0.64

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 3.8e-08
       MFS_2 264 fllvvtisallgiplwqplakrlgkkntyllgalltivllvlvlllqpsnlllflvllviagfgvgvaall 334
                 + ++v i++++g +l +pla r+gk++ ++  al++i++ ++ l     +++  +v+ + +g+++g++ ++
  EPX71780.1  61 LVGMVNIGTTIGCLLSSPLADRFGKRKCIMGWALVYISGIIVQLTT-VPSWVQIMVAKIWTGLSIGALSVI 130
                 567799***********************************99999.9999*************9998776 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.017
       MFS_2 221 frnraflillllfllaalalgvlnglllYyltyvlgngsaasvfllvvtisal..lgiplwqplakrlgkkntyllgalltivllvlvlll........ 309
                  r     + ll+  + a+ ++ +n+ + Yy t v +     s fl+ +++ a+    ++ +  +   +g++n  ++g + + + +++   +        
  EPX71780.1 262 IRY----RTLLGMAVMAFQQLTGNNYFFYYGTQVFRGTGLNSPFLASLILDAVnfGCTFGAIFVLEYFGRRNPLIFGGIWQSICFFIYASVgdraltrp 356
                 333....4455556666778899*************777777777777777776588899999999*****9999999999888887777789****** PP

       MFS_2 310 ......qpsnlllflvllviagfgvgvaallpwsmladvvDygelktGkrregvffavlsfisklatg 371
                       +++ +++++ +l+i+ f+    ++ +++ +  v +    ++  + + v++a ++f++ l++ 
  EPX71780.1 357 ngtsnhRAGAVMIVFSCLFIFCFA----QSWAPAAYVIVGESYPIRYRSKCAAVATASNWFCNFLISF 420
                 997776666677777776666665....3334444444445556666666666666666666666555 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.096
       MFS_2 272 allgiplwqplakrlgkkntyllgalltivllvlvlll 309
                 ++l +++ + +   +g k  yl++++ + +  +++l++
  EPX71780.1 415 NFLISFFTPFISNSIGFKYGYLFASCNLTAAVIIFLFA 452
                 45778888888888886666666666666666666665 PP

>> MFS_3  Transmembrane secretion effector
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   5.0   6.5e-05      0.23     254     360 ..      56     163 ..      47     203 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 6.5e-05
       MFS_3 254 lvyGillgalGvGAilgalllsrLRerlsser.lvllaavalAlvllslalasslwvavlvlllgGaaWitalstlnvavql.avPrWvvgRalavYlt 350
                 +  G+l+g + +G  +g ll+s L +r+++ + ++  a v +  ++++l+ ++s ++++++ + +G   i als +    q  + P  ++g  ++ Y+ 
  EPX71780.1  56 ARQGLLVGMVNIGTTIGCLLSSPLADRFGKRKcIMGWALVYISGIIVQLTTVPSWVQIMVAKIWTG-LSIGALSVIAPGYQSeSAPPQIRGAIVTTYQL 153
                 5569************************99872455788888999999998887655555555555.66********9999736799***********9 PP

       MFS_3 351 vlaGglaaGs 360
                  ++ g+   +
  EPX71780.1 154 FITAGIFIAA 163
                 8887765433 PP

>> Pex14_N  Peroxisomal membrane anchor protein (Pex14p) conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       1.8   6.5e+03     121     139 ..     138     161 ..     131     165 .. 0.69
   2 ?   10.6   0.2   0.00019      0.69      30     115 ..     454     529 ..     447     533 .. 0.44

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1.8
     Pex14_N 121 pppPlr.....twrdllitatala 139
                  +pP++     t+ +l+ita+++ 
  EPX71780.1 138 SAPPQIrgaivTTYQLFITAGIFI 161
                 355665666679999999998876 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00019
     Pex14_N  30 esKGLtqeEIeeaLkraereeease....savaassaseqa..qeesasssatpqpqaasqtsqsspspsppaqqqqqqyrpPivtypeflt 115
                 e+KGLt eEI+++   + ++ ++      +             q+ + ++s+ p+++ +++ ++ + ++s   + ++       ++yp+++t
  EPX71780.1 454 ETKGLTLEEINQLYMSSIKPWQSGAykrnR----------DevQNREPEKSRGPKSKFNEYVQHGPDTHSDDNSVTS------RQNYPQQVT 529
                 78************9955444443332210..........1112222222222222222222222222222222222......233333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (534 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       709  (0.0395449); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.60u 0.31s 00:00:00.90 Elapsed: 00:00:00.45
# Mc/sec: 3544.21
//
Query:       EPX71781.1  [L=531]
Description: hexose transporter Ght5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.2e-120  403.5  26.2   1.4e-120  403.3  26.2    1.0  1  Sugar_tr  Sugar (and other) transporter
    4.2e-18   65.4  30.5    2.6e-13   49.6  10.0    2.2  2  MFS_1     Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  403.3  26.2  1.5e-124  1.4e-120       3     451 ..      11     466 ..       9     467 .. 0.95

  Alignments for each domain:
  == domain 1  score: 403.3 bits;  conditional E-value: 1.5e-124
                 HHHHHHHHHHHHHHHCGGGTHHHHHHHHTST..T--SHHHHHH......HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-T CS
    Sugar_tr   3 lvaalggllfgYdtgvigafltllkfaknfg..lsksksskee...ssvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaa 96 
                 ++++++g +fg dtg ig+++++ +f++++   ++k+++   +   ss ++gl+++++++G++ G++++++++dr+G+++s+l+++ +++ig+++q ++
  EPX71781.1  11 VFVSMAGWMFGADTGSIGGITNMRDFQSRYAdkYDKETD---TysySSARQGLLTGMVNIGSMTGCILSSPFADRLGKRNSILFFTCVYLIGIIVQLTT 106
                 67899********************88877532444444...3346***************************************************99 PP

                 TTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHHHHHHHHHHGGGS---H CS
    Sugar_tr  97 kgknsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglglnktsnadgwrillglqlvpallllilllflPESP 195
                     s+ +++v+++ +G+g+G+ svl+P y+sE+Ap+++Rga+v+ yql+it+Gi++aa++++g+ +  +++ wr+++g++l++ ++ l+++lflPESP
  EPX71781.1 107 L--PSWVQFMVAKMWTGLGIGALSVLAPGYQSEVAPAAMRGAIVTTYQLFITAGIFIAACINMGTHRLAKSTSWRVPIGINLLWGIITLVGILFLPESP 203
                 9..89************************************************************999999**************************** PP

                 HHHHHTT-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH.........HTTHHHHSH...HHHHHHHHHHHHHHTTHHHHHHHTTTHHHHSS-THHH CS
    Sugar_tr 196 rylvekgkeeeakevlaklrgeedadrelaeekdsleaeqeee....kaswkellssktvrqrlligvvlqifqqltGinaimyysptifenlglsksl 290
                 ryl+++g++ ea +++ k ++  ++++ ++ e+++++   e+e     a+w e++s+ ++r+r+++g++++++qqltG+n+ +yy++++f+ +g++ ++
  EPX71781.1 204 RYLISVGRDAEALQIMCKNNDLHLEHEVIQTEYHMIKSDCEAElaggPAKWPEIFSK-NIRYRTFLGIGVMSLQQLTGNNYYFYYGTQVFRGTGMTSPY 301
                 ******************9999*****************9999**************.99*************************************** PP

                 HHHHHHHHHHHHHHHHHHHHHHHS-SHHHHHHHHHHHHHHHHHHH..HHHHTTSS........CHHHHHHHHHHHHHHHTTTTHHHHHHHHHHSHTTTH CS
    Sugar_tr 291 lvtiivgvvnfvatfvaiflvdrfGRRtllllGaagmaicfvilgivalllvaks.....kaasivaivfialfialfalgwgpvpwvlvsElfpqsvR 384
                 l+ +i+ +vnf  tf a++++++fGRRt l++Ga+ +++cf+i++ v + +  ks       a+ v+ivf ++fi++fa  w+p  +v+v E +p ++R
  EPX71781.1 302 LAALILDAVNFCCTFGALYVMEHFGRRTPLIIGALWQSLCFFIYAAVGDRCLYKSdgstnHQAGTVMIVFSCFFIFAFAQAWAPGAYVIVGESYPIRFR 400
                 *********************************************55555555555669999************************************* PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHT-HHHHHHHHHHHHHHHHHHHHS--STT--CCCCGGG CS
    Sugar_tr 385 skalaiavavnwlanflisllfpiiteaigggyvflvfaglavlfiifvfffvpetkgrtleeieel 451
                 sk++a+a++ nw++ flis+++p+it++ig +++++vfa++++ ++i++f f  etkg+tleei+ +
  EPX71781.1 401 SKCAAVATTGNWFWGFLISFFTPFITNTIG-FKYGYVFAACNLCAAIVIFAFAHETKGLTLEEINLV 466
                 ******************************.*********************************976 PP

>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.6  10.0   2.9e-17   2.6e-13      28     241 ..      37     295 ..       4     321 .. 0.68
   2 !   20.8  13.6   1.7e-08   0.00015      54     174 ..     320     452 ..     315     491 .. 0.76

  Alignments for each domain:
  == domain 1  score: 49.6 bits;  conditional E-value: 2.9e-17
       MFS_1  28 g...............ispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfa.sslw.lllvlrvlqGlgagalfpagaal 109
                 +               +s + +gll++++ +g++ + ++ ++++dr+G r  +l+   ++++g ++  ++  ++w  ++v+ + +Glg gal  ++  +
  EPX71781.1  37 QsryadkydketdtysYSSARQGLLTGMVNIGSMTGCILSSPFADRLGKRNSILFFTCVYLIG-IIVQLTtLPSWvQFMVAKMWTGLGIGALSVLAPGY 134
                 233334444444443399999******************************************.444443444566*********************** PP

       MFS_1 110 iadwfpkeergraigllsagfslGailgpllgg...llasslgWravfyilaivsllafvlfllllpeepperkrkspkeee................. 188
                  ++++p   rg  +  +++++ +G+ +++ +      la s +Wr++  i+ + +++ +v ++l+lpe+p+    +    e                  
  EPX71781.1 135 QSEVAPAAMRGAIVTTYQLFITAGIFIAACINMgthRLAKSTSWRVPIGINLLWGIITLV-GILFLPESPRYLISVGRDAEAlqimcknndlhlehevi 232
                 ****************************999876677899999**************977.55888888887777766666699999999999998888 PP

       MFS_1 189 ..............kgtgpaplvpawkallkdpvlwillialllfffgfsg....lltllplylqevlgls 241
                                  gpa+    w ++++++  +  ++++ +++    +       + + y  +v+  +
  EPX71781.1 233 qteyhmiksdceaeLAGGPAK----WPEIFSKNIRYRTFLGIGVMS----LqqltGNNYYFYYGTQVFRGT 295
                 777777766664444444444....555555552221333333332....212222222222233333333 PP

  == domain 2  score: 20.8 bits;  conditional E-value: 1.7e-08
       MFS_1  54 rlsdrfGrrrvlllglllfalglllll.f...a...........sslwlllvlrvlqGlgagalfpagaaliadwfpkeergraigllsagfslGailg 137
                 ++++ fGrr  l++g+l+ +l++++ + +   +           ++  +++++ ++  ++a a +p++++++ + +p + r++  +++++g+ +   l 
  EPX71781.1 320 YVMEHFGRRTPLIIGALWQSLCFFIYAaVgdrClyksdgstnhqAGTVMIVFSCFFIFAFAQAWAPGAYVIVGESYPIRFRSKCAAVATTGNWFWGFLI 418
                 67899*****************5555524444144445555644445544444445555557999*****************************99999 PP

       MFS_1 138 pllggllasslgWravfyilaivsllafvlfllllpe 174
                   + ++++  +g+ + ++++a  ++ a+v+f++   +
  EPX71781.1 419 SFFTPFITNTIGFKYGYVFAACNLCAAIVIFAF---A 452
                 9*****************999999999995433...3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (531 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       842  (0.046963); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.29s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 3720.12
//
Query:       EPX71782.1  [L=349]
Description: diacylglycerol O-acyltransferase Dga1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.9e-94  314.3   0.0    7.1e-94  314.1   0.0    1.0  1  DAGAT         Diacylglycerol acyltransferase
  ------ inclusion threshold ------
       0.12   11.0   0.6       0.16   10.6   0.6    1.1  1  Herpes_LAMP2  Herpesvirus Latent membrane protein 2


Domain annotation for each model (and alignments):
>> DAGAT  Diacylglycerol acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  314.1   0.0   7.9e-98   7.1e-94       6     290 ..      59     341 ..      54     348 .. 0.96

  Alignments for each domain:
  == domain 1  score: 314.1 bits;  conditional E-value: 7.9e-98
       DAGAT   6 tklwlllvLyavwllydidspkkggyrsnwvrrlavlkyfaeYfPvkLvktaeletdrnYliGyhPhgilsvgafvalatdatgvkekfpgirfnlatL 104
                  ++w +l +y+ wl+yd        ++s w++r a +++f++YfP++L+kta+l++++nY++GyhPhgils+gaf  +at+++++++ fpgi   + tL
  EPX71782.1  59 LPIWPILLVYLAWLFYDDAFVTAKDRQSPWLKRAAPYHWFCHYFPIRLHKTANLDPQKNYIFGYHPHGILSLGAFGGFATEGAEFSKLFPGINASVLTL 157
                 578************************************************************************************************ PP

       DAGAT 105 agqfrtpfrreillllGlievsresieyvLdkeekGravvlvvGGaeealeahpgketltLkkrkGfvkialktGadLvPvysfGendvykqvenpkgs 203
                 +++f++p+ r++ll l +  vs++s   +L++ + G++vv+v+GGa+e+l ++pg+++l+Lkkr Gfvk+a  tG++LvP+++fGe+d+++qv+n+ g+
  EPX71782.1 158 NSNFYVPVYRDYLLALNVNSVSKKSCVNILSR-GPGESVVIVIGGAQESLLSRPGQNNLVLKKRLGFVKLAYLTGSSLVPCFAFGESDIFEQVNNNPGT 255
                 ******************************87.578*************************************************************** PP

       DAGAT 204 klrkvqeklkkvlglsppilyGrglfnsltlGllPfrkpittvvGkPievtkteePtkeeidelhakYveaLaeLfeehkekfgvsk 290
                 ++ k+qe++kk  g++ p +yGrg+ n + +Gl+P rkpi++vvG+P++ +k+ +Pt++e+ e  + Y+ +L  L++++k+ f  ++
  EPX71782.1 256 RIYKFQEIVKKLAGFTIPFFYGRGILN-KSFGLMPWRKPINIVVGEPLDLPKKSNPTSQELYETQEEYIRRLDGLWNKYKDVFVPER 341
                 ***************************.77**************************************************9886544 PP

>> Herpes_LAMP2  Herpesvirus Latent membrane protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.6   1.8e-05      0.16     130     172 ..      33      76 ..      16      99 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 1.8e-05
  Herpes_LAMP2 130 ivtvlvlitsmllqisntw.tssqiflplstllllfflyifatv 172
                   +  ++v++ s+ l +  +w t  ++flp++ +ll+++ ++f  +
    EPX71782.1  33 VEALAVFLHSVSLTLTASWfTILWVFLPIWPILLVYLAWLFYDD 76 
                   5678999***********95567***********9998887544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (349 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       441  (0.024597); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.30s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2501.12
//
Query:       EPX71783.1  [L=115]
Description: ubiquitin family protein Urm1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.4e-30  104.2   0.6      4e-30  104.0   0.6    1.1  1  Urm1      Urm1 (Ubiquitin related modifier)
    6.3e-06   26.8   0.1    7.8e-06   26.5   0.1    1.1  1  ThiS      ThiS family


Domain annotation for each model (and alignments):
>> Urm1  Urm1 (Ubiquitin related modifier)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.0   0.6   4.5e-34     4e-30       2      95 ..       3      97 ..       2      98 .. 0.97

  Alignments for each domain:
  == domain 1  score: 104.0 bits;  conditional E-value: 4.5e-34
                EEEEEETTCGGGCTT-SEEEEEE-SSSSS-BHHHHHHHHCCCC-SS.GHHHCBSTTSB-TTEEEEETTCEHHHCTCCCSB--TTEEEEEEETTT- CS
        Urm1  2 veleflgGlelllekkkkhkveleieseevnleeliayikknlike.rkevFlekdkvrPGilvLindaDwellgekdyelkdkDkivFistlhG 95
                v++e+lgGl++l++k+k+ ++el    e+ +l++li+++++++ +  +ke+F  +++vrPGi+vL+nd+Dwell++++y+l+dkD++vF+stlhG
  EPX71783.1  3 VKIELLGGLDMLFKKQKELSLELAELGEDKTLKSLIHFMAEKIESPtQKELFYLDGTVRPGIIVLVNDQDWELLDKEEYVLEDKDQVVFVSTLHG 97
                89**********************99****************9988788*********************************************9 PP

>> ThiS  ThiS family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.1   8.7e-10   7.8e-06       3      72 ..      14      93 ..      13      97 .. 0.89

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 8.7e-10
                ETTCCHHHHTCEEEEESSTSBHHHHHHHHHHHTCHHG..........TTTTEEEEETTEEEGC.CTTTSB--TTCEEEEEE CS
        ThiS  3 lfaelrelageeelelaegstvaelleaLgerypela..........lerrvavavNgeivpr.lwldtelkdgDevailp 72
                lf +++el   e  el+e++t++ l++ ++e+ +  +           +++++v+vN+++ +  + ++++l d D+v+++ 
  EPX71783.1 14 LFKKQKELSL-ELAELGEDKTLKSLIHFMAEKIESPTqkelfyldgtVRPGIIVLVNDQDWELlDKEEYVLEDKDQVVFVS 93
                6778888886.8999**************887766557899******99**************88**************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       504  (0.0281109); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.22s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 897.30
//
Query:       EPX71784.1  [L=441]
Description: ubiquitin-protein ligase E3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.5e-11   43.9  11.1    1.5e-11   43.9  11.1    2.3  2  zf-C3HC4_2      Zinc finger, C3HC4 type (RING finger)
    2.7e-11   43.1   8.7    2.7e-11   43.1   8.7    2.1  2  zf-C3HC4_3      Zinc finger, C3HC4 type (RING finger)
    3.1e-11   43.4  10.6    3.1e-11   43.4  10.6    2.3  2  zf-RING_2       Ring finger domain
    3.5e-10   39.6  11.6    3.5e-10   39.6  11.6    2.1  2  zf-C3HC4        Zinc finger, C3HC4 type (RING finger)
    1.1e-09   38.2   9.7    1.1e-09   38.2   9.7    2.2  2  zf-RING_UBOX    RING-type zinc-finger
      1e-07   32.0  11.2      1e-07   32.0  11.2    2.2  2  zf-C3HC4_4      zinc finger of C3HC4-type, RING
    1.2e-07   31.5   9.6    1.2e-07   31.5   9.6    2.2  2  zf-RING_5       zinc-RING finger domain
    4.2e-07   29.7   8.0    4.2e-07   29.7   8.0    2.1  2  Prok-RING_4     Prokaryotic RING finger family 4
    8.8e-06   25.9   9.1    8.8e-06   25.9   9.1    2.2  2  zf-rbx1         RING-H2 zinc finger domain
    0.00085   19.1   6.5     0.0027   17.6   2.1    2.3  2  zf-RING_6       zf-RING of BARD1-type protein
     0.0016   18.5   2.1     0.0048   16.9   2.1    1.8  1  zf-ANAPC11      Anaphase-promoting complex subunit 11 RING-H2
     0.0021   17.7   2.9     0.0055   16.4   2.9    1.8  1  zf-RING_11      RING-like zinc finger
     0.0032   17.6   0.1     0.0079   16.3   0.1    1.6  1  U-box           U-box domain
     0.0075   16.7   1.7       0.26   11.7   0.0    2.7  2  DUF983          Protein of unknown function (DUF983)
      0.008   16.1  14.0       0.54   10.3   6.9    2.4  2  zinc-ribbons_6  zinc-ribbons
  ------ inclusion threshold ------
      0.022   14.6   8.1      0.022   14.6   8.1    2.7  2  zf-RING_4       RING/Ubox like zinc-binding domain
      0.038   14.3   0.5      0.038   14.3   0.5    3.0  1  C1_2            C1 domain
       0.13   12.4  15.2       0.61   10.2   0.6    2.8  3  DZR             Double zinc ribbon
        1.7    8.7  10.3        2.8    8.0   0.1    2.5  2  HypA            Hydrogenase/urease nickel incorporation, meta
        1.8    8.7  13.7       0.07   13.3   7.0    1.9  2  zf-RING_10      zinc RING finger of MSL2
          3    8.1  15.8        3.8    7.7   1.3    3.3  3  zf-piccolo      Piccolo Zn-finger
        3.4    7.3  12.0       0.31   10.7   4.6    2.3  2  Zn_ribbon_17    Zinc-ribbon, C4HC2 type
          5    7.1  13.0         11    6.1   2.3    4.0  4  OrfB_Zn_ribbon  Putative transposase DNA-binding domain


Domain annotation for each model (and alignments):
>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.9  11.1   1.9e-14   1.5e-11       2      40 .]      70     107 ..      69     107 .. 0.98
   2 ?    2.1   1.2      0.22   1.7e+02       1      19 [.     178     196 ..     178     201 .. 0.82

  Alignments for each domain:
  == domain 1  score: 43.9 bits;  conditional E-value: 1.9e-14
  zf-C3HC4_2   2 CpiCldmlkdpsvvtpCgHvfCqkCilrsLeekneCPlC 40 
                 CpiC + l+ p  +tpCgH++C++C++ +L+ +++CP+C
  EPX71784.1  70 CPICTETLQRP-FTTPCGHTYCYECLKNWLKTSKSCPTC 107
                 ***********.9************************** PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.22
  zf-C3HC4_2   1 kCpiCldmlkdpsvvtpCg 19 
                 +C+ C+ +l++p     Cg
  EPX71784.1 178 RCARCQWELENPYHCDHCG 196
                 5999********7777776 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.1   8.7   3.5e-14   2.7e-11       4      48 ..      69     112 ..      66     114 .. 0.96
   2 ?   -0.7   1.4       1.7   1.3e+03      26      45 ..     179     197 ..     176     201 .. 0.56

  Alignments for each domain:
  == domain 1  score: 43.1 bits;  conditional E-value: 3.5e-14
                 B-TTTSSSBS-EEETTEEEEEE-HHHHHHHHHTT-B-TTT--B-- CS
  zf-C3HC4_3   4 eCviClerprnvvllpCgHlvlCeeCaekllkrkkkCpiCrrpie 48 
                  C+iC e+ +  +  pCgH+ +C+eC++++lk +k+Cp Cr++i+
  EPX71784.1  69 DCPICTETLQRPFTTPCGHT-YCYECLKNWLKTSKSCPTCRQKIH 112
                 5*******************.**********************97 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 1.7
                 -HHHHHHHHHTT-B-TTT-- CS
  zf-C3HC4_3  26 CeeCaekllkrkkkCpiCrr 45 
                 C +C  +l ++  +C  C  
  EPX71784.1 179 CARCQWEL-ENPYHCDHCGF 197
                 55555555.45566666654 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.4  10.6     4e-14   3.1e-11       2      44 .]      69     108 ..      68     108 .. 0.89
   2 ?   -0.5   2.2       2.1   1.6e+03       3      25 ..     179     197 ..     177     200 .. 0.68

  Alignments for each domain:
  == domain 1  score: 43.4 bits;  conditional E-value: 4e-14
   zf-RING_2   2 eCpICleelssadsvlllpCgHvfhreClerwlrssstCPlCr 44 
                 +CpIC+e l++   + ++pCgH++++eCl++wl++s++CP+Cr
  EPX71784.1  69 DCPICTETLQR---PFTTPCGHTYCYECLKNWLKTSKSCPTCR 108
                 7*****99965...55556***********************9 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 2.1
   zf-RING_2   3 CpICleelssadsvlllpCgHv.f 25 
                 C+ C+ el+++++     C H+ f
  EPX71784.1 179 CARCQWELENPYH-----CDHCgF 197
                 8889878876555.....666555 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.6  11.6   4.5e-13   3.5e-10       1      41 []      70     107 ..      70     107 .. 0.98
   2 ?   -3.0   2.7       9.2   7.2e+03       1      17 [.     179     195 ..     179     199 .. 0.68

  Alignments for each domain:
  == domain 1  score: 39.6 bits;  conditional E-value: 4.5e-13
                 -TTT-S--SS-E.E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepnelleCkHsfCskCirkilksrkkvkCPlC 41 
                 CpiC+e+++ p  +++C+H++C++C++++lk  ++++CP+C
  EPX71784.1  70 CPICTETLQRPF-TTPCGHTYCYECLKNWLK--TSKSCPTC 107
                 ************.******************..8899**** PP

  == domain 2  score: -3.0 bits;  conditional E-value: 9.2
                 -TTT-S--SS-E.E-TT CS
    zf-C3HC4   1 CpiCleeakepnelleC 17 
                 C+ C+ e+++p   + C
  EPX71784.1 179 CARCQWELENPYHCDHC 195
                 77788888887744444 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.2   9.7   1.4e-12   1.1e-09       1      39 []      70     105 ..      70     105 .. 0.95
   2 ?   -2.9   3.0       9.3   7.3e+03       1      19 [.     179     195 ..     179     196 .. 0.80

  Alignments for each domain:
  == domain 1  score: 38.2 bits;  conditional E-value: 1.4e-12
  zf-RING_UBOX   1 CpIClelftdPlv.lpCGHtFCreClwelskslegafkCP 39 
                   CpIC e++++P + +pCGHt+C eCl   +++l+++ +CP
    EPX71784.1  70 CPICTETLQRP-FtTPCGHTYCYECL---KNWLKTSKSCP 105
                   ***********.745***********...99********9 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 9.3
  zf-RING_UBOX   1 CpIClelftdPlvlpCGHt 19 
                   C  C+ ++++P   +C H+
    EPX71784.1 179 CARCQWELENP-Y-HCDHC 195
                   67788889999.6.89996 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.0  11.2   1.3e-10     1e-07       1      42 []      70     107 ..      70     107 .. 0.95
   2 ?   -2.8   0.1       9.7   7.5e+03      32      42 .]     173     182 ..     169     182 .. 0.61

  Alignments for each domain:
  == domain 1  score: 32.0 bits;  conditional E-value: 1.3e-10
  zf-C3HC4_4   1 CPiCldYLekPvsleCGhsfClsCisslqkepdgeqllCplC 42 
                 CPiC++ L+ P + +CGh++C +C++++ k +++    Cp C
  EPX71784.1  70 CPICTETLQRPFTTPCGHTYCYECLKNWLKTSKS----CPTC 107
                 *****************************99955....9999 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 9.7
  zf-C3HC4_4  32 pdgeqllCplC 42 
                 +dg+ l+C  C
  EPX71784.1 173 EDGV-LRCARC 182
                 3444.888888 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.5   9.6   1.6e-10   1.2e-07       2      44 .]      70     109 ..      69     109 .. 0.97
   2 ?   -1.7   1.5       3.9   3.1e+03      25      42 ..     179     195 ..     178     203 .. 0.64

  Alignments for each domain:
  == domain 1  score: 31.5 bits;  conditional E-value: 1.6e-10
   zf-RING_5   2 CnkCfeklskeekfyltsCgHifCekClkkllekeavCpiCrk 44 
                 C++C e l   +++++t+CgH++C +Clk+ l+ ++ Cp+Cr+
  EPX71784.1  70 CPICTETL---QRPFTTPCGHTYCYECLKNWLKTSKSCPTCRQ 109
                 ********...99****************************97 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 3.9
   zf-RING_5  25 CekClkkllekeavCpiC 42 
                 C +C  +l  +++ C  C
  EPX71784.1 179 CARCQWELE-NPYHCDHC 195
                 555555555.66666666 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   8.0   5.3e-10   4.2e-07       1      43 [.      70     114 ..      66     117 .. 0.92
   2 ?   -3.0   1.4       8.8   6.8e+03      21      41 ..     179     200 ..     177     204 .. 0.64

  Alignments for each domain:
  == domain 1  score: 29.7 bits;  conditional E-value: 5.3e-10
  Prok-RING_4   1 CvlCgeqekkailepCgHlvCkeCfdsk.dls.sCPlCqrrisks 43 
                  C +C+e  + +   pCgH  C eC++++ + s sCP C+++i  +
   EPX71784.1  70 CPICTETLQRPFTTPCGHTYCYECLKNWlKTSkSCPTCRQKIHTQ 114
                  99**************************85557********9765 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 8.8
  Prok-RING_4  21 CkeC.fdskdlssCPlCqrris 41 
                  C +C ++ ++   C  C  +is
   EPX71784.1 179 CARCqWELENPYHCDHCGFQIS 200
                  7777555556667777766665 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9   9.1   1.1e-08   8.8e-06      14      55 .]      70     108 ..      62     108 .. 0.85
   2 ?   -2.3   0.6       7.2   5.6e+03       3      17 ..     179     195 ..     178     206 .. 0.63

  Alignments for each domain:
  == domain 1  score: 25.9 bits;  conditional E-value: 1.1e-08
     zf-rbx1  14 cieckapgdeecpvvlGeCgHaFHlhCiskWlktrkvCPlcr 55 
                 c+ c+++ ++   + +  CgH++  +C+++Wlkt+k+CP+cr
  EPX71784.1  70 CPICTETLQR---PFTTPCGHTYCYECLKNWLKTSKSCPTCR 108
                 7777777776...56669***********************8 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 7.2
     zf-rbx1   3 CaiCrnele..eaciec 17 
                 Ca C+ ele   +c +c
  EPX71784.1 179 CARCQWELEnpYHCDHC 195
                 77777777733345555 PP

>> zf-RING_6  zf-RING of BARD1-type protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   2.1   3.4e-06    0.0027       1      48 [.      61     109 ..      61     117 .. 0.85
   2 ?    3.5   0.1     0.086        67       7      26 ..     176     195 ..     172     205 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 3.4e-06
   zf-RING_6   1 larlekllrcsrctdilrepvclggcehifcsncisdcf..gsgcpvcyt 48 
                 l+rl+k + c  ct+ l+ p     c h +c +c+ + +     cp c  
  EPX71784.1  61 LTRLKKTIDCPICTETLQRPFT-TPCGHTYCYECLKNWLktSKSCPTCRQ 109
                 78******************87.68***********98722457999975 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.086
   zf-RING_6   7 llrcsrctdilrepvclggc 26 
                 +lrc+rc   l +p     c
  EPX71784.1 176 VLRCARCQWELENPYHCDHC 195
                 79*****9999999754444 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   2.1   6.1e-06    0.0048      49      83 ..      82     113 ..      45     115 .. 0.79

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 6.1e-06
                 EBTTS-EEEHHHHHHHHHHHSTSSB-TTTSSB--B CS
  zf-ANAPC11  49 lGkckhnfhlhcilkwletetskglcpmcrqtfkl 83 
                    c h++   c+ +wl+t++s   cp crq++++
  EPX71784.1  82 TTPCGHTYCYECLKNWLKTSKS---CPTCRQKIHT 113
                 356**************98765...******9876 PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   2.9   7.1e-06    0.0055       1      29 []      69      94 ..      69      94 .. 0.92

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 7.1e-06
  zf-RING_11  1 eCsICLeefkpgqalfilpCsHtFHfkCI 29
                +C IC e++   q+ f++pC+Ht+ ++C+
  EPX71784.1 69 DCPICTETL---QRPFTTPCGHTYCYECL 94
                8********...569*************5 PP

>> U-box  U-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.1     1e-05    0.0079       7      51 ..      70     113 ..      67     119 .. 0.93

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 1e-05
                 -TTT-SB-SSEEEETTTEEEEHHHHHHHHTT.SSB-TTT-SB--G CS
       U-box   7 dpitlelmkdPvilpsgvvvdrstiekhllsrdktdPftrepltq 51 
                 +pi +e ++ P  +p g+++  + ++++l+  +k++P  r+++  
  EPX71784.1  70 CPICTETLQRPFTTPCGHTYCYECLKNWLKT-SKSCPTCRQKIHT 113
                 9******************************.********99865 PP

>> DUF983  Protein of unknown function (DUF983)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.0   0.00034      0.26       2      39 ..      95     129 ..      94     137 .. 0.90
   2 ?    3.0   0.6      0.18   1.4e+02       9      30 ..     190     210 ..     178     211 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00034
      DUF983   2 kgfLkvadaCeaCgldlsharaddgPayfvilivghlv 39 
                 k++Lk+ ++C++C ++++ +++   Pay+v+ ++g+++
  EPX71784.1  95 KNWLKTSKSCPTCRQKIHTQPS---PAYLVYDLMGIIA 129
                 689**************99986...9999999998875 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.18
      DUF983   9 daCeaCgldlsharaddgPayf 30 
                  +C++Cg ++s  +ad  P +f
  EPX71784.1 190 YHCDHCGFQISD-EADSEPEWF 210
                 69*****99975.466666665 PP

>> zinc-ribbons_6  zinc-ribbons
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   6.9   0.00069      0.54       2      40 ..      69     112 ..      63     116 .. 0.84
   2 !    9.7   0.6     0.001       0.8      16      39 ..     176     199 ..     166     203 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00069
                     --SSS-S--EE-S....SEEE-TTT--.EEEEEEE-SSS-S--- CS
  zinc-ribbons_6   2 kCpeCqqelekrg....eqyhCeaCqe.dlkkealCpeCeqele 40 
                      Cp C + l++       ++ C +C +  lk  + Cp+C+q++ 
      EPX71784.1  69 DCPICTETLQRPFttpcGHTYCYECLKnWLKTSKSCPTCRQKIH 112
                     7*****9999544478899******8835678899******986 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.001
                     EEE-TTT--EEEEEEE-SSS-S-- CS
  zinc-ribbons_6  16 qyhCeaCqedlkkealCpeCeqel 39 
                      ++C  Cq +l++  +C++C+ ++
      EPX71784.1 176 VLRCARCQWELENPYHCDHCGFQI 199
                     578999999999999999998765 PP

>> zf-RING_4  RING/Ubox like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   8.1   2.8e-05     0.022       1      46 [.      70     110 ..      70     111 .. 0.86
   2 ?   -2.1   2.4       4.5   3.5e+03      16      24 ..     190     199 ..     179     202 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 2.8e-05
   zf-RING_4   1 cplCdeeldetdkdlkpCeCgyqiClfCyhrileeeegrCPaCree 46 
                 cp+C+e l    ++ +  +Cg+  C  C+++ l+ +++ CP Cr++
  EPX71784.1  70 CPICTETL----QRPFTTPCGHTYCYECLKNWLK-TSKSCPTCRQK 110
                 88888887....5566779**************7.69*******85 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 4.5
   zf-RING_4  16 kpC.eCgyqi 24 
                 + C +Cg+qi
  EPX71784.1 190 YHCdHCGFQI 199
                 56878***98 PP

>> C1_2  C1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.5   4.8e-05     0.038      15      42 ..     173     199 ..     164     202 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 4.8e-05
        C1_2  15 ssesfnCsaCgrkidgffYsCseCdfsl 42 
                 +++  +C  C+++  ++ Y+C+ C f++
  EPX71784.1 173 EDGVLRCARCQWEL-ENPYHCDHCGFQI 199
                 667789*******8.667********97 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.3      0.52     4e+02      28      40 ..      67      79 ..      54      87 .. 0.66
   2 ?    5.2   8.4     0.028        22       1      36 [.      70     109 ..      64     119 .. 0.55
   3 ?   10.2   0.6   0.00079      0.61      14      41 ..     178     202 ..     169     205 .. 0.81

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.52
         DZR 28 edrCpsCgekvdp 40
                 + Cp C+e ++ 
  EPX71784.1 67 TIDCPICTETLQR 79
                5678888777554 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.028
         DZR   1 CpqCgee......lppdarfCseCgtk.lkavaaedrCpsCge 36 
                 Cp C e       +p +  +C+eC ++ lk   +++ Cp C +
  EPX71784.1  70 CPICTETlqrpftTPCGHTYCYECLKNwLK---TSKSCPTCRQ 109
                 444444444444444445555555555333...3555555555 PP

  == domain 3  score: 10.2 bits;  conditional E-value: 0.00079
         DZR  14 fCseCgtklkavaaedrCpsCgekvdpe 41 
                  C +C+ +l++   +++C++Cg +++ e
  EPX71784.1 178 RCARCQWELEN---PYHCDHCGFQISDE 202
                 69*******85...9******9998766 PP

>> HypA  Hydrogenase/urease nickel incorporation, metallochaperone, hypA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   6.4      0.31   2.5e+02      69      95 ..      86     110 ..      61     116 .. 0.84
   2 ?    8.0   0.1    0.0036       2.8      65      93 ..     171     196 ..     150     204 .. 0.76

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.31
                 -EEEETTTS-EEECHHHHHS-TTTSSS CS
        HypA  69 vkvrCreCgkefeleekalrCpkCgsa 95 
                  +++C eC k++ +++k  +Cp+C ++
  EPX71784.1  86 GHTYCYECLKNWLKTSK--SCPTCRQK 110
                 5789********97755..8****985 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0036
                 EEE--EEEETTTS-EEECHHHHHS-TTTS CS
        HypA  65 eevpvkvrCreCgkefeleekalrCpkCg 93 
                 + ++ ++rC +C+ e e     ++C +Cg
  EPX71784.1 171 DAEDGVLRCARCQWELENP---YHCDHCG 196
                 5677899******555543...68****8 PP

>> zf-RING_10  zinc RING finger of MSL2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   7.0   8.9e-05      0.07       2      45 ..      69     109 ..      68     116 .. 0.91
   2 ?   -1.4   0.5       3.5   2.8e+03       1      16 [.     177     192 ..     177     200 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 8.9e-05
  zf-RING_10   2 sCvvCckLLvdPlepkekeCqHyvCrlCvgkkkklkpsCsqCkd 45 
                  C +C++ L+ P++     C+H  C  C+++  k   sC++C++
  EPX71784.1  69 DCPICTETLQRPFTT---PCGHTYCYECLKNWLKTSKSCPTCRQ 109
                 599*********986...8***********************84 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 3.5
  zf-RING_10   1 lsCvvCckLLvdPlep 16 
                 l C+ C   L++P++ 
  EPX71784.1 177 LRCARCQWELENPYHC 192
                 5688888888888876 PP

>> zf-piccolo  Piccolo Zn-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   2.9    0.0079       6.2       3      28 ..      70      95 ..      68     100 .. 0.93
   2 ?   -0.0   0.1       1.3     1e+03       2      12 ..     103     113 ..     101     119 .. 0.72
   3 ?    7.7   1.3    0.0049       3.8      23      49 ..     179     210 ..     169     213 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0079
  zf-piccolo  3 CplCktelnvgskeppnyntCteCkk 28
                Cp+C+  l+   + p  ++ C+eC k
  EPX71784.1 70 CPICTETLQRPFTTPCGHTYCYECLK 95
                ************************66 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 1.3
  zf-piccolo   2 lCplCktelnv 12 
                 +Cp C+ ++++
  EPX71784.1 103 SCPTCRQKIHT 113
                 68888877765 PP

  == domain 3  score: 7.7 bits;  conditional E-value: 0.0049
  zf-piccolo  23 CteCkkqv.....CnlCGFnptphltekkeWl 49 
                 C  C+ ++     C  CGF  ++++ ++ eW 
  EPX71784.1 179 CARCQWELenpyhCDHCGFQISDEADSEPEWF 210
                 6666655444444******************5 PP

>> Zn_ribbon_17  Zinc-ribbon, C4HC2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   4.6    0.0004      0.31       4      47 ..      67     106 ..      64     111 .. 0.88
   2 ?    0.7   0.8      0.53   4.1e+02       7      41 ..     179     215 ..     176     226 .. 0.56

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.0004
  Zn_ribbon_17   4 lksCayCelavkgrvvlcgvCeHvlHasCarewfenddlaeCps 47 
                   +  C +C  ++++ ++ +  C+H    +C+++w+++ +  +Cp+
    EPX71784.1  67 TIDCPICTETLQRPFTTP--CGHTYCYECLKNWLKTSK--SCPT 106
                   568*********998865..***************999..8986 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.53
  Zn_ribbon_17   7 CayCelavkgrvvlcgvCeH.vl.HasCarew.fendd 41 
                   Ca C+ +++   + c  C+  +   a+   ew ++n++
    EPX71784.1 179 CARCQWELEN-PYHCDHCGFqISdEADSEPEWfWDNEN 215
                   6666666654.345666654232123455566566655 PP

>> OrfB_Zn_ribbon  Putative transposase DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   1.4       0.6   4.7e+02      30      53 ..      69      94 ..      64      98 .. 0.78
   2 ?    6.1   2.3     0.014        11      26      40 ..      98     113 ..      91     121 .. 0.78
   3 ?    3.5   0.7     0.084        66      30      56 ..     178     199 ..     169     205 .. 0.84
   4 ?   -0.9   0.0       2.1   1.6e+03      20      37 ..     266     283 ..     258     292 .. 0.80

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.6
  OrfB_Zn_ribbon 30 tCseCgsknke..alsgrtfkCpnCg 53
                    +C+ C +++++  +      +C +C 
      EPX71784.1 69 DCPICTETLQRpfTTPCGHTYCYECL 94
                    79999999999777777777777775 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.014
  OrfB_Zn_ribbon  26 y.TSktCseCgsknke 40 
                       TSk+C+ C +k  +
      EPX71784.1  98 LkTSKSCPTCRQKIHT 113
                     44*********99877 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.084
  OrfB_Zn_ribbon  30 tCseCgsknkealsgrtfkCpnCgfea 56 
                     +C++C  ++++      ++C++Cgf++
      EPX71784.1 178 RCARCQWELEN-----PYHCDHCGFQI 199
                     58888888888.....899*****984 PP

  == domain 4  score: -0.9 bits;  conditional E-value: 2.1
  OrfB_Zn_ribbon  20 eevnpayTSktCseCgsk 37 
                     e ++ ++TS+ ++  g +
      EPX71784.1 266 EFIDNRNTSQLSPFDGNE 283
                     67999*****99977765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (441 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1041  (0.0580624); expected 358.6 (0.02)
Passed bias filter:                      457  (0.0254894); expected 358.6 (0.02)
Passed Vit filter:                        80  (0.00446204); expected 17.9 (0.001)
Passed Fwd filter:                        30  (0.00167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              23  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.46
# Mc/sec: 2906.95
//
Query:       EPX71785.1  [L=543]
Description: hexose transporter Ght5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     3e-122  408.7  24.4   3.9e-122  408.4  24.4    1.1  1  Sugar_tr  Sugar (and other) transporter
    7.4e-19   67.9  26.4    1.7e-13   50.3  10.7    2.2  2  MFS_1     Major Facilitator Superfamily
  ------ inclusion threshold ------
      0.012   14.1  23.2       0.19   10.3   0.4    3.6  2  MFS_2     MFS/sugar transport protein
       0.22   11.2   2.7       0.48   10.1   0.1    2.7  2  PRA1      PRA1 family protein


Domain annotation for each model (and alignments):
>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  408.4  24.4  8.7e-126  3.9e-122       3     451 ..      11     466 ..       9     467 .. 0.95

  Alignments for each domain:
  == domain 1  score: 408.4 bits;  conditional E-value: 8.7e-126
                 HHHHHHHHHHHHHHHCGGGTHHHHHHHHTST..T--SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTT CS
    Sugar_tr   3 lvaalggllfgYdtgvigafltllkfaknfg..lsksksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgk 99 
                 ++++++g +fg dtg ig+++++ +f+++f   ++k+++++  ss ++gl+++++++G++ G++++++l+dr+G++ s+++ +++++ig+++q++a   
  EPX71785.1  11 VFVSMAGWMFGADTGSIGGITNMRDFQSRFAdkYDKETDTYSYSSARQGLLTGMVNIGSFTGCILSSPLADRIGKRTSIIVWTIIYLIGIIIQVTAV-- 107
                 67899********************999986324444444444******************************************************.. PP

                 SS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHHHHHHHHHHGGGS---HHHH CS
    Sugar_tr 100 nsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglglnktsnadgwrillglqlvpallllilllflPESPryl 198
                  s+ +++v+++ +G+g+G+ sv++P y+sE+Ap+++Rga+v+ yql+it+Gi++aa++++g+ k +++ +wri++g++l++ ++ l+++lfl ESPryl
  EPX71785.1 108 PSWVQIMVAKMWTGLGIGALSVIAPGYQSEVAPAAMRGAIVTTYQLFITAGIFIAACINMGTHKLQKTAQWRIPMGINLLWGIITLVGILFLTESPRYL 206
                 89************************************************************************************************* PP

                 HHTT-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH.........HTTHHHHSH...HHHHHHHHHHHHHHTTHHHHHHHTTTHHHHSS-THHHHHH CS
    Sugar_tr 199 vekgkeeeakevlaklrgeedadrelaeekdsleaeqeee....kaswkellssktvrqrlligvvlqifqqltGinaimyysptifenlglsksllvt 293
                 +++g++e+a +++ k ++ +++++ +++e+++++   e+e      +w++++++ ++r r+l+g++++++qqltG+n+++yy++++f+ +gl+ ++l+ 
  EPX71785.1 207 ISVGRDEAALQIMCKNNDLPLEHEVIQAEYHMIKSDCEAElaggPCTWSQVFDK-QIRHRTLLGIAVMSLQQLTGNNYFFYYGTQVFRGTGLNSPFLAA 304
                 ***************9999*****************9999999999******99.89****************************************** PP

                 HHHHHHHHHHHHHHHHHHHHS-SHHHHHHHHHHHHHHHHHHH..HHHHTTSS........CHHHHHHHHHHHHHHHTTTTHHHHHHHHHHSHTTTHHHH CS
    Sugar_tr 294 iivgvvnfvatfvaiflvdrfGRRtllllGaagmaicfvilgivalllvaks.....kaasivaivfialfialfalgwgpvpwvlvsElfpqsvRska 387
                 +i+ +vnf  tf aif+ ++fGRR+ l++G++ ++icf+i++ v +   ++         + v+ivf +lfi++f+ +w+p  +v+v E +p + Rsk+
  EPX71785.1 305 LILDAVNFGCTFGAIFVLEYFGRRNPLIIGGVWQSICFFIYASVGDKALKRPdgssnHRSGAVMIVFSCLFIFCFSQTWAPAAYVIVGESYPIRYRSKC 403
                 ******************************************4444444444455888899************************************** PP

                 HHHHHHHHHHHHHHHHHHHHHHHCHHHT-HHHHHHHHHHHHHHHHHHHHS--STT--CCCCGGG CS
    Sugar_tr 388 laiavavnwlanflisllfpiiteaigggyvflvfaglavlfiifvfffvpetkgrtleeieel 451
                 +a+a+  nw++nflis+++p+it++ig + +++vfa++++ ++i++f+f  etkg+tleei+ +
  EPX71785.1 404 AALATSGNWTWNFLISFFTPFITNSIG-FRYGYVFAACNLTGAIIIFLFAHETKGLTLEEINLV 466
                 ***************************.*********************************976 PP

>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.3  10.7   3.8e-17   1.7e-13      28     263 ..      37     320 ..       4     324 .. 0.70
   2 !   23.0   8.8   7.4e-09   3.3e-05      56     179 ..     322     457 ..     318     488 .. 0.80

  Alignments for each domain:
  == domain 1  score: 50.3 bits;  conditional E-value: 3.8e-17
       MFS_1  28 g...............ispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfa.sslw.lllvlrvlqGlgagalfpagaal 109
                 +               +s + +gll++++ +g++ + ++ ++l+dr+G r  +++  +++++g +++ ++  ++w  ++v+ + +Glg gal  ++  +
  EPX71785.1  37 QsrfadkydketdtysYSSARQGLLTGMVNIGSFTGCILSSPLADRIGKRTSIIVWTIIYLIG-IIIQVTaVPSWvQIMVAKMWTGLGIGALSVIAPGY 134
                 233334444444443399999******************************************.666643467787*********************** PP

       MFS_1 110 iadwfpkeergraigllsagfslGailgpllggllasslg....Wravfyilaivsllafvlfllllpeepperkrkspkeee................ 188
                  ++++p   rg  +  +++++ +G+ +++ +       l     Wr ++ i+ + +++ +v ++l+l+e+p+    +   e                  
  EPX71785.1 135 QSEVAPAAMRGAIVTTYQLFITAGIFIAACINMGTH-KLQktaqWRIPMGINLLWGIITLV-GILFLTESPRYLISVGRDEAAlqimcknndlplehev 231
                 ****************************99988666.3334677**************966.4466666666666665555559***999998888887 PP

       MFS_1 189 ........kgtgpaplvp...........awkallkdpvl...w.illialllfffgfsglltllplylqevlglsglllaglllallalvgailall 263
                         k        +            w++++ ++     +  + +++l   +g+++++++ +       gl++ +la+l+l ++ +++ ++a++
  EPX71785.1 232 iqaeyhmiK--------SdceaelaggpcTWSQVFDKQIRhrtLlGIAVMSLQQLTGNNYFFYYGTQV-FRGTGLNSPFLAALILDAVNFGCTFGAIF 320
                 666666662........044444444667677777777443221245555555566666666666663.45555553377776666666666666555 PP

  == domain 2  score: 23.0 bits;  conditional E-value: 7.4e-09
       MFS_1  56 sdrfGrrrvlllglllfalglllll.f...a.........sslw.lllvlrvlqGlga.galfpagaaliadwfpkeergraigllsagfslGailgpl 139
                  + fGrr  l++g ++ ++++++ + +   a         + +  +++v+ +l  ++   + +pa+++++ + +p + r++  +l+++g+     l   
  EPX71785.1 322 LEYFGRRNPLIIGGVWQSICFFIYAsVgdkAlkrpdgssnHRSGaVMIVFSCLFIFCFsQTWAPAAYVIVGESYPIRYRSKCAALATSGNWTWNFLISF 420
                 6789****************5555544444155556666777999999999999999967888999999****************************** PP

       MFS_1 140 lggllasslgWravfyilaivsllafvlfllllpeepper 179
                 + ++++ s+g+r+ ++++a  +  a++   ++l++ +++ 
  EPX71785.1 421 FTPFITNSIGFRYGYVFAACNLTGAII---IFLFAHETKG 457
                 **************9999998888888...4555554444 PP

>> MFS_2  MFS/sugar transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5  11.3     7e-05      0.32     263     335 ..      60     131 ..      50     203 .. 0.93
   2 ?   10.3   0.4   4.2e-05      0.19     207     329 ..     248     381 ..     233     395 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 7e-05
       MFS_2 263 vfllvvtisallgiplwqplakrlgkkntyllgalltivllvlvlllqpsnlllflvllviagfgvgvaallp 335
                 +++++v i+++ g +l +pla r+gk++++++ +++++++ ++ + +   +++  +v+ + +g+g+g++ +++
  EPX71785.1  60 LLTGMVNIGSFTGCILSSPLADRIGKRTSIIVWTIIYLIGIIIQVTA-VPSWVQIMVAKMWTGLGIGALSVIA 131
                 5788999****************************************.8899999999999999999988775 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 4.2e-05
       MFS_2 207 qkeklslleqlkevfrnraflillllfllaalalgvlnglllYyltyvlgngsaasvfllvvtisal..lgiplwqplakrlgkkntyllgalltivll 303
                 + ++ ++++ + +  r+r     ll++ + +l ++ +n+ + Yy t v +     s fl+++++ a+    ++ +  +   +g++n  ++g + + + +
  EPX71785.1 248 AGGPCTWSQVFDKQIRHR----TLLGIAVMSLQQLTGNNYFFYYGTQVFRGTGLNSPFLAALILDAVnfGCTFGAIFVLEYFGRRNPLIIGGVWQSICF 342
                 555566666666666664....45566666777888**************77777788888887777668889999999*******9999999998888 PP

       MFS_2 304 vlvlll..............qpsnlllflvllviagfgvg 329
                 ++   +              + + +++++ +l+i+ f+ +
  EPX71785.1 343 FIYASVgdkalkrpdgssnhRSGAVMIVFSCLFIFCFS-Q 381
                 88877789999***999999899999999999999887.4 PP

>> PRA1  PRA1 family protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.5      0.22   9.9e+02      92      93 ..      73      89 ..       3     131 .. 0.43
   2 ?   10.1   0.1   0.00011      0.48      40     113 ..     310     383 ..     309     394 .. 0.74

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.22
        PRA1 92 r...............v 93
                                +
  EPX71785.1 73 CilsspladrigkrtsI 89
                03333333334443331 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00011
        PRA1  40 tNYlivvllvlllslltnplslivllllvlawlflyflr.seplvlfgrelsdrvvlivllvvsvlllfltgavl 113
                 +N+   + ++++l  + +   li++ +  ++++f+y +  ++ l++ + +  ++   +v++v+s+l++f ++ ++
  EPX71785.1 310 VNFGCTFGAIFVLEYFGRRNPLIIGGVWQSICFFIYASVgDKALKRPDGSS-NHRSGAVMIVFSCLFIFCFSQTW 383
                 789999999*******99999****************77477776655554.44455556666666666666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (543 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       540  (0.0301188); expected 358.6 (0.02)
Passed bias filter:                      257  (0.0143343); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.28s 00:00:00.88 Elapsed: 00:00:00.44
# Mc/sec: 3666.64
//
Query:       EPX71786.1  [L=272]
Description: hypothetical protein SOCG_03723 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
       0.52    9.8   2.8       0.72    9.3   2.8    1.2  1  DUF1129        Protein of unknown function (DUF1129)
        2.5    7.8   5.2        1.2    8.9   2.9    1.4  1  FA_desaturase  Fatty acid desaturase
        3.4    7.8  12.2         11    6.2  12.2    1.8  1  DUF4870        Domain of unknown function (DUF4870)


Domain annotation for each model (and alignments):
>> DUF1129  Protein of unknown function (DUF1129)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   2.8   0.00012      0.72     147     197 ..     117     167 ..      78     189 .. 0.59

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00012
     DUF1129 147 wkrllilllllvvwlvlftlvallpaviNpvLpplvliiigviafvvryyl 197
                 +  ++i+ +++ +w+   +lv ++ +++   +  + +i ++++ ++v +y+
  EPX71786.1 117 LSFCFIISVMVDFWFSYKYLVPFIKESMKESVRLWFQITVAAVLVIVAFYM 167
                 223333334444455555555555555555555555555555555555543 PP

>> FA_desaturase  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   2.9    0.0002       1.2     105     174 ..     125     190 ..      97     204 .. 0.71

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0002
  FA_desaturase 105 vlg..wllalvlglwlrrlarrrapsksrrrkwrllawlllllawlglwlalllllglall..lwlvplllllf 174
                    v+   w+       +++ +   ++++k++ r w  ++++++l+  +++++++l++ +l++   ++l+pl++ + 
     EPX71786.1 125 VMVdfWFS------YKYLVPFIKESMKESVRLWFQITVAAVLV--IVAFYMFLYVCSLLVDfiVILIPLVASGG 190
                    33332222......67777777788888888888888888888..88888888888888887799999888775 PP

>> DUF4870  Domain of unknown function (DUF4870)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2  12.2    0.0018        11      23      85 ..     121     185 ..      65     203 .. 0.78

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0018
     DUF4870  23 iilPlvi..wllkkdksefvdeqgkea..lNFqislliysiilivlsllvligflllllllllllnl 85 
                 +i+ +++  w+++k  ++f++e  ke+  l Fqi++  +++i+++ ++l ++++  l+ ++++l+ l
  EPX71786.1 121 FIISVMVdfWFSYKYLVPFIKESMKESvrLWFQITVAAVLVIVAFYMFLYVCSL--LVDFIVILIPL 185
                 444444333*****************9556899999988887777766666666..22233322222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       890  (0.0496402); expected 358.6 (0.02)
Passed bias filter:                      421  (0.0234815); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2025.38
//
Query:       EPX71787.1  [L=197]
Description: hypothetical protein SOCG_03724 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.062   12.7   2.7        0.2   11.0   0.1    2.1  2  DUF2417   Region of unknown function (DUF2417)
        0.8   10.0   2.6        6.6    7.1   0.0    2.4  2  Orf78     Orf78 (ac78)


Domain annotation for each model (and alignments):
>> DUF2417  Region of unknown function (DUF2417)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   2.3e-05       0.2      20      62 ..       7      52 ..       2      89 .. 0.71
   2 ?    1.8   0.4     0.015   1.4e+02     110     136 ..     137     161 ..     124     171 .. 0.65

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 2.3e-05
     DUF2417 20 ssegylspddpa...vspynlwkvrnlrwilnilllinliwlvllL 62
                ++++ ls+++ +     +++ wk++++ ++++i ++ nl++lv+++
  EPX71787.1  7 QNSAELSENNIRsdpSPNKQWWKTHFIETVTIITIIYNLVFLVIVF 52
                445555666655565566677899*******************987 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.015
     DUF2417 110 nivlavLllvnllllllvkytReregf 136
                  +vl+vL ++n++l++l   +R+ +gf
  EPX71787.1 137 AMVLVVLAVLNICLFVLL--IRNPIGF 161
                 466666666666665543..5555555 PP

>> Orf78  Orf78 (ac78)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.0   0.00074       6.6      44      89 ..      12      51 ..       2      61 .. 0.53
   2 ?    1.3   1.6     0.047   4.2e+02      64      80 ..     138     154 ..     131     158 .. 0.58

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.00074
       Orf78 44 aeknditekesnaaekaqalnillisllavvcvlvllyviyYfvil 89
                 ++n+i+++ s +++         + ++  v+++ ++y +++ vi+
  EPX71787.1 12 LSENNIRSDPSPNKQW------WKTHFIETVTIITIIYNLVFLVIV 51
                3344444444443333......334556666666666666666664 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.047
       Orf78  64 nillisllavvcvlvll 80 
                  +l++ ++  +c++vll
  EPX71787.1 138 MVLVVLAVLNICLFVLL 154
                 34444445556666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       911  (0.0508115); expected 358.6 (0.02)
Passed bias filter:                      503  (0.0280551); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1543.04
//
Query:       EPX71788.1  [L=78]
Description: hypothetical protein SOCG_03725 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.55   10.4   2.7       0.98    9.5   2.7    1.4  1  PT-VENN   Pre-toxin domain with VENN motif


Domain annotation for each model (and alignments):
>> PT-VENN  Pre-toxin domain with VENN motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   2.7   5.5e-05      0.98      13      38 ..      15      54 ..      13      56 .. 0.87

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 5.5e-05
     PT-VENN 13 salstlaaGlaGgvvg..............gtladavaGa 38
                ++ + l +G+aGg+++              g+++ +++Ga
  EPX71788.1 15 ITFANLHGGVAGGIASaeivkrdsptpiveGDIGGTASGA 54
                688999**********999999999999998888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       379  (0.0211389); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.28s 00:00:00.62 Elapsed: 00:00:00.41
# Mc/sec: 564.36
//
Query:       EPX71789.1  [L=101]
Description: hypothetical protein SOCG_03726 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       496  (0.0276647); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.41
# Mc/sec: 744.81
//
Query:       EPX71790.1  [L=208]
Description: hypothetical protein SOCG_03727 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.016   13.6   0.3      0.019   13.4   0.3    1.2  1  SID-1_RNA_chan  dsRNA-gated channel SID-1


Domain annotation for each model (and alignments):
>> SID-1_RNA_chan  dsRNA-gated channel SID-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.3   1.1e-06     0.019     485     539 ..      88     140 ..      51     148 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1.1e-06
  SID-1_RNA_chan 485 kdfasylLaifivnlllYlvfYiimKlrsserilllalllivltlvvwavalyff 539
                      ++   +L+ + +n+  Y v+Y + K++ +e+++ +a +++v+++ v +++l f+
      EPX71790.1  88 CNMCAAVLCTASLNVPCYSVYYFVKKIIGFEKMNDIA-FYGVCFVNVAVFVL-FW 140
                     5666778999***********************9976.56665544444433.33 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       806  (0.0449551); expected 358.6 (0.02)
Passed bias filter:                      563  (0.0314016); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.28s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1474.68
//
Query:       EPX71791.1  [L=494]
Description: membrane transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-38  133.1  21.8    1.1e-38  133.1  21.8    2.0  2  MFS_1     Major Facilitator Superfamily
    7.8e-13   48.1   2.7    7.8e-13   48.1   2.7    1.8  2  Sugar_tr  Sugar (and other) transporter
    2.9e-06   26.9   1.2    0.00013   21.4   0.2    2.4  2  MFS_4     Uncharacterised MFS-type transporter YbfB
    0.00024   19.7   1.4     0.0004   18.9   1.4    1.3  1  TRI12     Fungal trichothecene efflux pump (TRI12)
     0.0018   16.7   6.0     0.0041   15.5   2.1    2.4  2  OATP      Organic Anion Transporter Polypeptide (OATP) family
     0.0036   17.0   0.4     0.0036   17.0   0.4    2.1  2  UNC-93    Ion channel regulatory protein UNC-93
     0.0059   15.0   0.4      0.009   14.5   0.4    1.2  1  MFS_3     Transmembrane secretion effector


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.1  21.8   4.4e-42   1.1e-38       5     350 ..      59     438 ..      55     441 .. 0.85
   2 ?    0.9   3.0     0.068   1.7e+02     135     172 ..     437     477 ..     430     488 .. 0.56

  Alignments for each domain:
  == domain 1  score: 133.1 bits;  conditional E-value: 4.4e-42
       MFS_1   5 aflsalarsilgpalplalaedlgispse.igllltlyalgaavaslplGrlsdrfGrrrvlllglllfalg.lllllfasslw.lllvlrvlqGlgag 100
                 a+l  +a+s+++p l   +ae ++i  s+   l+l++y l++a++ ++ ++ls+ fGrr +l +g ++f+++ ++++l  +     ++++r+l+G+g++
  EPX71791.1  59 ALLGPMASSMVAPCLD-QIAERFHIENSTeKALVLSIYLLVFAISPMISAPLSEIFGRRILLQAGNVIFIVFnMACGL--ARTKaQMYIFRFLAGFGSA 154
                 6788999********9.899****766555******************************************666666..666768************* PP

       MFS_1 101 alfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpeepperkrkspkeee........... 188
                 + + +g   i+d+f++eergra++++s++  lG+ +gp+++g++a++  + ++f+  +i+s ++f l + +l+e++p+    ++++++           
  EPX71791.1 155 TPMGLGSGTISDLFTPEERGRAVAVMSLAPLLGPTIGPVISGFIAEYTTYKWIFWSTTIFSGFVFALSIPFLTETYPKTLLGRKARKLnkiektlkyht 253
                 *******************************************************************99***999999999999999999999999999 PP

       MFS_1 189 ..........kgtgpaplvpawkallkdpvlwillialllfffgfsg....lltllplylqevlgls.glllaglllallalvgailallagrlsdr.. 270
                           k ++pa ++p +k+l ++pv+    i +++ +++ +g    +lt+ p+    +++++    +agl + +++l+ + ++  +g ++d+  
  EPX71791.1 254 ewrlehipqrKLVAPALMRP-LKMLTTQPVV----ILCAGYMAIQYGilylVLTTYPV--LWTHDYNeRPSIAGLHYIAPGLGLILGSQASGIFIDKtf 345
                 99999888888888888888.********55....33333333333343336666666..455555552599999999999999999**********99 PP

       MFS_1 271 ..........lgrrrrlllallllllaalglallavtssavllll....vlvliGfglgfv.fpsllalasdlappeeagtasglfntagslgga 350
                           + +++r  ++ll+++++  gl++ ++t +++ +++    + +++ +gl +  +++ ++l++ ++   +a++ ++++  ++sl+++
  EPX71791.1 346 rflkkrnngkMAPEFRVPVILLGTMFFPTGLFVYGWTAKYHTHWIgpdiGAAMFNVGLMLGwRGIQTYLIDTFI--IYAASSTAVACCIRSLAAF 438
                 9999999999999********************************99997777777555551666666666666..7777777777777777776 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.068
       MFS_1 135 ilg.pllggllasslgWravfyilaivsllafv..lfllll 172
                 ++g pl+g  l+++lg+ +   +la++ l + +  + +l++
  EPX71791.1 437 AFGfPLFGQTLYDHLGYGWGNSLLAFIVLGSSIitCSILWF 477
                 44446666666666665555444444444443323444444 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.1   2.7     3e-16   7.8e-13      35     194 ..      83     229 ..      25     301 .. 0.89
   2 ?   -5.3   3.6       4.7   1.2e+04     356     424 ..     396     461 ..     364     484 .. 0.52

  Alignments for each domain:
  == domain 1  score: 48.1 bits;  conditional E-value: 3e-16
                 --SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-S CS
    Sugar_tr  35 sksksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvGigvGlasvlvPmyisEiApk 133
                 ++        s+   l++si+l++ +i+ +++ +l+++fGR+  l +++v+f++ ++ +++a    +  ++++ R+l+G+g  +  +l + +is + ++
  EPX71791.1  83 EN--------STEKALVLSIYLLVFAISPMISAPLSEIFGRRILLQAGNVIFIVFNMACGLAR---TKAQMYIFRFLAGFGSATPMGLGSGTISDLFTP 170
                 33........333469***********************************************...889****************************** PP

                 CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHHHHHHHHHHG.GGS--- CS
    Sugar_tr 134 klRgalvslyqlaitfGilvaaifglglnktsnadgwrillglqlvpallllill.lflPES 194
                 + Rg+ v +  la  +G  ++ ++  ++++++    +++ ++++ +++ ++++l   fl E+
  EPX71791.1 171 EERGRAVAVMSLAPLLGPTIGPVISGFIAEYTT---YKWIFWSTTIFSGFVFALSiPFLTET 229
                 ****************************99999...9************9999875788887 PP

  == domain 2  score: -5.3 bits;  conditional E-value: 4.7
                 HHHHHHHHHTTTTHHHHHHHHHHSHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHT-HHHHHHHH CS
    Sugar_tr 356 ialfialfalgwgpvpwvlvsElfpqsvRskalaiavavnwlanflisllfpiiteaigggyvflvfag 424
                  a+f +   lgw ++   l  ++f     ++ +a+a ++  la f   l+ +++ +++g ++ ++   +
  EPX71791.1 396 AAMFNVGLMLGWRGIQTYL-IDTFIIYA-ASSTAVACCIRSLAAFGFPLFGQTLYDHLG-YGWGNSLLA 461
                 4455555555555555222.33333322.233455566666666666666666666666.333333333 PP

>> MFS_4  Uncharacterised MFS-type transporter YbfB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.2   5.2e-08   0.00013      57     170 ..     115     227 ..     104     257 .. 0.77
   2 ?    4.0   0.0      0.01        26      97     136 ..     297     336 ..     264     345 .. 0.84

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 5.2e-08
       MFS_4  57 eRlrllagllatvllllamaltesfaaflliRflaGvasAvvlvfgsslvlahaaaarrervgallfaGvGlGiavsgllvllllqlglsasslWlala 155
                  R+ l+ag +   +  +a++l++  a + + RflaG +sA+ + +gs ++    ++ +r+r  a++   + lG  ++ ++  ++ ++ +  +++ + ++
  EPX71791.1 115 RRILLQAGNVIFIVFNMACGLARTKAQMYIFRFLAGFGSATPMGLGSGTISDLFTPEERGRAVAVMSLAPLLGPTIGPVISGFIAEY-TTYKWIFWSTT 212
                 4777999999999*************************************9999999999988888665555555555444444333.34455555677 PP

       MFS_4 156 vlsavllllvalllp 170
                 ++s  ++ l+++ l 
  EPX71791.1 213 IFSGFVFALSIPFLT 227
                 777777777777666 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.01
       MFS_4  97 vvlvfgsslvlahaaaarrervgallfaGvGlGiavsgll 136
                 + lv+++  vl      +r+++ +l++  +GlG ++++ +
  EPX71791.1 297 LYLVLTTYPVLWTHDYNERPSIAGLHYIAPGLGLILGSQA 336
                 56889999898888999999*************9998865 PP

>> TRI12  Fungal trichothecene efflux pump (TRI12)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   1.4   1.6e-07    0.0004      73     238 ..      81     247 ..      50     252 .. 0.82

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 1.6e-07
       TRI12  73 dvgqsensslfstlwttgqavsilvmgrltdrfgrrpfvilthilglvgaiv.gctatkfntllaamtllgv.aagpagasplfvgelmsnktkflgll 169
                  + +s +++l+ +++ +  a+s ++   l++ fgrr ++ +  ++ +v  +  g + tk +       l g  +a p g     + +l++   +   + 
  EPX71791.1  81 HIENSTEKALVLSIYLLVFAISPMISAPLSEIFGRRILLQAGNVIFIVFNMAcGLARTKAQMY-IFRFLAGFgSATPMGLGSGTISDLFTPEERGRAVA 178
                 4678889999999*******************************9999876514444444443.3344444426789999999999*****99999999 PP

       TRI12 170 ivsipvvvtsglspylgqrlaiqgswrwifyiyiitsaiavllivvwyyppsfaqlhgkkvrkreelak 238
                 ++s+  +   +++p +   +a   +++wif+   i s     l + +      + l g+k+rk +++ k
  EPX71791.1 179 VMSLAPLLGPTIGPVISGFIAEYTTYKWIFWSTTIFSGFVFALSIPFLTETYPKTLLGRKARKLNKIEK 247
                 99998888888********************************999999999999*******9988766 PP

>> OATP  Organic Anion Transporter Polypeptide (OATP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.1     0.015        39       3      43 ..      52      92 ..      50     108 .. 0.83
   2 !   15.5   2.1   1.6e-06    0.0041     137     356 ..     144     342 ..     129     379 .. 0.73

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.015
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        OATP  3 lvllsllglvqamvsgyfkstittiEkrFklpsstsglias 43
                lv++s+++l+  m+s+++  ++ +i  rF++++st   ++ 
  EPX71791.1 52 LVIVSVFALLGPMASSMVAPCLDQIAERFHIENSTEKALVL 92
                6889999999999999***************9998766554 PP

  == domain 2  score: 15.5 bits;  conditional E-value: 1.6e-06
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx. RF
        OATP 137 laqlllGiGatpiytlGisYidDnvkkknsplylgilyalrilGpalGfllGslllklyvdidseisltpkdprWvgaWWlgflilgvllllaaiplf. 234
                 +  +l+G+G+++ + lG   i D  ++++    +++++ + +lGp +G ++++++++ y++            +W+  +W   +++g++ +l+  +l  
  EPX71791.1 144 IFRFLAGFGSATPMGLGSGTISDLFTPEERGRAVAVMSLAPLLGPTIGPVISGFIAE-YTTY-----------KWI--FWSTTIFSGFVFALSIPFLTe 228
                 5579*************************************************9999.7666...........687..688888888777665543333 PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        OATP 235 fFPkelpkkkeerakkkseeesaekkeekkkkeksksseeeelkslkdfpkalkrllknpifllvilssvfeillvaGfitFlpkylEtqFslsaseAn 333
                  +Pk+l ++k+++ +k +++ +     +++ + ++  ++   +  +  +++ lk+l ++p+ +l     ++++ ++  + t  p    + ++  +s A 
  EPX71791.1 229 TYPKTLLGRKARKLNKIEKTLK----YHTEWRLEHIPQR---KLVAPALMRPLKMLTTQPVVILCAGYMAIQYGILYLVLTTYPVLWTHDYNERPSIAG 320
                 8****98888877776655432....3333333333333...466778888899999999888877776666666666666667777777777777776 PP

                 xxxxxxxxxxxxxxxxxxxxxxx RF
        OATP 334 lltGvvvipgaalGillgGllvk 356
                 l   ++  +g +lG  ++G+ + 
  EPX71791.1 321 LHY-IAPGLGLILGSQASGIFID 342
                 653.3334456666666666665 PP

>> UNC-93  Ion channel regulatory protein UNC-93
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.4   1.4e-06    0.0036      42     111 ..      91     162 ..      52     187 .. 0.80
   2 ?   -3.7   0.4       3.4   8.8e+03      86     104 ..     202     220 ..     189     222 .. 0.58

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 1.4e-06
      UNC-93  42 slaiiyavftvanlvapsvvdlltakwalvigallyaifqlgF.lllnkyylyissallGvgaal.lwtgqG 111
                  l+i ++vf+++ ++++++ ++ + +++l +g +++++f+++  l   k+ +yi   l G+g+a  +  g G
  EPX71791.1  91 VLSIYLLVFAISPMISAPLSEIFGRRILLQAGNVIFIVFNMACgLARTKAQMYIFRFLAGFGSATpMGLGSG 162
                 589999*********************************987549999**************9862334444 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 3.4
      UNC-93  86 llnkyylyissallGvgaa 104
                  ++k+ ++ +  + G+ +a
  EPX71791.1 202 TTYKWIFWSTTIFSGFVFA 220
                 2455666666666666655 PP

>> MFS_3  Transmembrane secretion effector
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.4   3.5e-06     0.009      63     177 ..     104     213 ..      83     244 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 3.5e-06
       MFS_3  63 ilaGalaDnfdrRkvllavqlllalvsvlltvlaalgllspwlllaltlligiGaalndPaWqAsvgelvkrrdvpaAvaLnsvginiaRsvGPAlgGv 161
                 +++  l+++f rR +l a+ ++ + v  ++  la +       + ++ +l+g G+a  +   + ++++l + ++   Ava+ s+   +  ++GP ++G 
  EPX71791.1 104 MISAPLSEIFGRRILLQAGNVIFI-VFNMACGLART----KAQMYIFRFLAGFGSATPMGLGSGTISDLFTPEERGRAVAVMSLAPLLGPTIGPVISGF 197
                 566778888887766655555443.33344444433....456789***************************************************** PP

       MFS_3 162 lvaavGaalafavnal 177
                 +       + f  +++
  EPX71791.1 198 IAEYTTYKWIFWSTTI 213
                 9988888777765554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (494 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       563  (0.0314016); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.58u 0.27s 00:00:00.85 Elapsed: 00:00:00.42
# Mc/sec: 3565.49
//
Query:       EPX71792.1  [L=275]
Description: hypothetical protein SOCG_03729 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.07   13.3   0.0       0.13   12.5   0.0    1.4  1  FANCL_C   FANCL C-terminal domain


Domain annotation for each model (and alignments):
>> FANCL_C  FANCL C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   7.2e-06      0.13      30      62 ..     190     218 ..     173     220 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 7.2e-06
                 --B-SGGGHHHHHHHHSSS-TTT--EEE-TTT- CS
     FANCL_C  30 kkfHsaCLkeWlrslkesrqsfdvlfGeCPyCk 62 
                  ++HsaCL+ W+r++k    sf +  G+ P Ck
  EPX71792.1 190 SIIHSACLQHWYRGMK----SFRLYRGTVPECK 218
                 578**********975....7888889999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (275 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       309  (0.0172346); expected 358.6 (0.02)
Passed bias filter:                      287  (0.0160076); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.54
# Mc/sec: 1529.50
//
Query:       EPX71793.1  [L=537]
Description: membrane transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.1e-36  123.5  32.1    9.1e-36  123.5  32.1    1.8  2  MFS_1     Major Facilitator Superfamily
    1.6e-10   40.5  12.3    1.6e-10   40.5  12.3    2.7  3  Sugar_tr  Sugar (and other) transporter
  ------ inclusion threshold ------
      0.016   14.9   0.9      0.033   13.9   0.9    1.4  1  BNIP3     BNIP3


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.5  32.1   1.5e-39   9.1e-36       3     349 ..     105     482 ..     102     486 .. 0.83
   2 !    6.1   4.9   0.00074       4.4      89     181 ..     438     529 ..     438     535 .. 0.82

  Alignments for each domain:
  == domain 1  score: 123.5 bits;  conditional E-value: 1.5e-39
       MFS_1   3 laaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslwlllvlrvlqGlgaga 101
                 ++a+++++++si+++      a+++++ +++  l  +++ lg+a++s+++++ls+ +Gr +++ ++l++f l+ + + +++++w l+++r++ G++a++
  EPX71793.1 105 FIAIVITANSSIFSAGGG-VAAKQYHVGAAVGDLCSAVFLLGFAAGSVIFAPLSEVYGRLPIYSCTLIIFTLFQIGGGLSQNIWSLIIFRFIHGFFACT 202
                 677888888888888888.999****999988888888999********************************5555588******************* PP

       MFS_1 102 lfpagaaliadwfpkeergraigllsagfslGailgpllgglla.sslgWravfyilaivsllafvlfllllpeepperkrkspkeee........... 188
                  ++a++  ++d++++ er++a+ ++ a++ +G++ gp +gg+++ s lgWr+ f+i+ i ++l  v++++++pe++ +   + +++ +           
  EPX71793.1 203 PMSACGGTVSDLYSPVERTSALLFFCACAFVGPLTGPTIGGFITdSKLGWRWDFWINMIWAALTWVIVIFVMPESHGSTILDFKARYLrkttscslwyn 301
                 ****************************************************************99977777666666666655555588888888888 PP

       MFS_1 189 ........kgtgpaplvpawkallkdpvlw.illialllfffgfsglltllplylqevlgls....glllaglllallalvgailallagrlsdr.... 270
                             +++l+ ++k+l +   +  i+l+ ++++   ++++ +  p+ +  ++g++    gl ++g  + ++ +vg+++ +l+    ++    
  EPX71793.1 302 eherqrsvTNAIRTSLTRGIKLLSTEAIVQaICLYLVFVNV-LLYMVNVGYPM-MFAQYGFNpgeeGLAMLG--VDVGIFVGFAFTPLIHIHYKKrfkl 396
                 76665444444444444489999999955345666666664.77777777777.699999999999999999..8888888888888888888777999 PP

       MFS_1 271 ....lgrrrrlllallllllaalglallavtssavllllvlvliGf..glgfv...fpsllalasdlappeeagtasglfntagslgg 349
                     + ++ rl+  +++ +++ +gl++la+t  +++++++ ++ G+  g+gf    ++++++l+++++  e a++a+++ +t+++++g
  EPX71793.1 397 nngnVRPEDRLWPLFFGSFFIPIGLFWLAWTCYPSVHWAAPLVSGVflGWGFLyvlQACYAYLVDSYH--ELAASALAVGTTTRYAAG 482
                 9999999************************5555555544442222355555667999999999999..***********9999776 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.00074
       MFS_1  89 lvlrvlqGlgagalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpeepperkr 181
                 lv+ v+ G+g   ++ a++a+++d +++   ++a+++ +++  ++     +++  ++ +l+++++  +la++++ ++ + +l+++  ++ r+r
  EPX71793.1 438 LVSGVFLGWGFLYVLQACYAYLVDSYHE-LAASALAVGTTTRYAAGGGMTVVARPMYNNLNYHWATSLLAFIGCALVPIPFLFFFFGKRIRQR 529
                 6899***********************9.88899988888777777666788899999********999999999977666666655555444 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.5  12.3   2.7e-14   1.6e-10      47     248 ..     134     326 ..     102     366 .. 0.73
   2 !    5.0   0.4    0.0016       9.4     144     197 ..     369     434 ..     365     437 .. 0.89
   3 ?   -3.3   1.6      0.51     3e+03     385     436 ..     468     521 ..     443     523 .. 0.72

  Alignments for each domain:
  == domain 1  score: 40.5 bits;  conditional E-value: 2.7e-14
                 HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHH CS
    Sugar_tr  47 lsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyql 145
                    l+ ++fl+G ++Gs+++ +l++++GR +++ ++ ++f   ++  ++++   +++ li+ R++ G+++ +    +  ++s +  +  R     ++  
  EPX71793.1 134 VGDLCSAVFLLGFAAGSVIFAPLSEVYGRLPIYSCTLIIFTLFQIGGGLSQ---NIWSLIIFRFIHGFFACTPMSACGGTVSDLYSPVERTSALLFFCA 229
                 4558999********************************************...****************************99888889888889999 PP

                 HHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHHHHHHHHHHG.GGS---HHHHHH..TT-HHHHHHHHHH.HHHCHHHHHHHHHHHHHHHHHHH.... CS
    Sugar_tr 146 aitfGilvaaifglglnktsnadgwrillglqlvpallllill.lflPESPrylve..kgkeeeakevlak.lrgeedadrelaeekdsleaeqeeeka 240
                 +  +G l + ++g ++ +++   gwr+ +++++++a l  +++ +++PES   ++   k ++ + +++ +   ++ e +    +++ +sl ++      
  EPX71793.1 230 CAFVGPLTGPTIGGFITDSKL--GWRWDFWINMIWAALTWVIViFVMPESHGSTILdfKARYLRKTTSCSLwYNEHERQRSVTNAIRTSLTRG------ 320
                 9999********999988888..9***********988765552778***8887762244444333333332444455555556666666666...... PP

                 .HTTHHHH CS
    Sugar_tr 241 swkellss 248
                    +lls+
  EPX71793.1 321 --IKLLST 326
                 ..334444 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.0016
                 HHHHHHHHHHHHHHHHHH.HTSS-............TTHHHHHHHCCHHHHHHHHHHGGGS---HHH CS
    Sugar_tr 144 qlaitfGilvaaifglgl.nktsn............adgwrillglqlvpallllilllflPESPry 197
                  l++ +Gi+v++ f+  +  ++++            +  w++++g+ ++p  l+ ++++  P S ++
  EPX71793.1 369 MLGVDVGIFVGFAFTPLIhIHYKKrfklnngnvrpeDRLWPLFFGSFFIPIGLFWLAWTCYP-SVHW 434
                 578899*****9999888789998999********9999************99999999999.9998 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 0.51
                 HHHHHHHHHHHHHHHHHHHHHHHHHHCHHH..T-HHHHHHHHHHHHHHHHHHHH CS
    Sugar_tr 385 skalaiavavnwlanflisllfpiiteaig..ggyvflvfaglavlfiifvfff 436
                 ++ala+ +++   a   ++++   + ++++   + + l f g+a++ i f fff
  EPX71793.1 468 ASALAVGTTTRYAAGGGMTVVARPMYNNLNyhWATSLLAFIGCALVPIPFLFFF 521
                 556666666666666666667777777776545667778888899888888888 PP

>> BNIP3  BNIP3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.9   5.6e-06     0.033      64     160 ..      23     119 ..      15     121 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 5.6e-06
       BNIP3  64 rassssdspprpksPqdegqidveserdpssqseeeaseeekeeeillkkdadWvadwssrpeniPPkefkfkhpkr.svslSirktkvmkkgglfSa 160
                 +++ + ds p+ + P ++++ +ve + + ss++++  + +++++ ++ +  +d+ + w    + + Pk++ + +++   +  S     +  ++++fSa
  EPX71793.1  23 KVNIKKDSIPQGQEPTHQQHEKVEPQTH-SSEEDDGFTSSHSKSTQEEQDLSDYQVAWDGLDDPLNPKNWPMWKKNLtLTIASFIAIVITANSSIFSA 119
                 678888999******6666668998888.45555444444445555555669******************9998886245568888899999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (537 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1102  (0.0614647); expected 358.6 (0.02)
Passed bias filter:                      672  (0.0374812); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.68u 0.29s 00:00:00.97 Elapsed: 00:00:00.46
# Mc/sec: 3498.66
//
Query:       EPX71794.1  [L=438]
Description: TDT malic acid transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-65  220.9  46.5    2.9e-65  220.7  46.5    1.0  1  SLAC1     Voltage-dependent anion channel
  ------ inclusion threshold ------
        5.2    6.6   9.2       0.12   11.9   0.4    2.7  3  Saf_2TM   SAVED-fused 2TM effector domain


Domain annotation for each model (and alignments):
>> SLAC1  Voltage-dependent anion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  220.7  46.5   3.3e-69   2.9e-65       1     322 [.      29     367 ..      29     369 .. 0.94

  Alignments for each domain:
  == domain 1  score: 220.7 bits;  conditional E-value: 3.3e-69
       SLAC1   1 hftpawFaivMGtgilalllk.a.lparglriislilfllalvlfllllvlyllrfilypeavrkelrhpveslflgtfpmglltilnglll..vl.pg 94 
                 hft+awFa++MGtg+++++ + + + ++gl+++++i+f++ l++f l+++++l+rf++yp+++ k++++ +e +f++tf+++++ti+++ +    + +g
  EPX71794.1  29 HFTWAWFASTMGTGGIGMITSlYyFRFTGLNTLGKIVFVFQLFIFSLFTICILFRFLRYPGTFWKSWNNAGEVVFMPTFLLSIATIISNFYPyaYPyTG 127
                 8****************99964234359***********************************************************777775566677 PP

       SLAC1  95 ewlatlalvllWigvllslltavvvvfllftekeekleeitpawllpvvgllvvallgallaesqnpslqllgilvvslllwglGlllalvlfvlylyr 193
                 ew+++++++ +W + +++++++v + + lf+++  ++ +i pa++lp+++++++++++++++esq+p+++   ++v++++++glG+ ++l+l+   l r
  EPX71794.1 128 EWMVWTIRITYWTYFAFACIVCVSLFYTLFRNHPFQMGTIIPAIILPIFPCMICGVAASAIVESQPPEQAKN-MIVAGIAFQGLGFWVYLLLYGNNLLR 225
                 ********************************9888****************************99998888.************************** PP

       SLAC1 194 lithklppaelrptlfiplGplgqgalallllgkaapk..........aaevlkvlalllalflwglglfwllvavlsvls...lpv.rlkfslswWaf 278
                 l+t +l pa+ rp++fi++ p++ ++l ll l+  a +           +e+l +++ +la+f+++lg+f ++va++sv++       +lkf++sw+a+
  EPX71794.1 226 LFTTGLQPAADRPGMFILVSPPSYTGLTLLDLAFGAVHkhhpifvsknSPEWLLFICTFLAIFMIALGAFNFFVALISVITgffS-PgKLKFKVSWFAM 323
                 ********************************99996669*******9999******************************6543.1699********* PP

       SLAC1 279 tFPlgalalatielgkaleseafkvlgtillvllvlvwllvlvg 322
                 +F +g+l++   elgka++s+a+ vlg ++  l+ +vw+++++ 
  EPX71794.1 324 IFANGGLVMVIQELGKAVDSRALDVLGQACGSLISVVWVILIIL 367
                 ***************************************99875 PP

>> Saf_2TM  SAVED-fused 2TM effector domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.4      0.17   1.5e+03      66      90 ..      64      87 ..      57      90 .. 0.71
   2 ?   11.9   0.4   1.4e-05      0.12      57      85 ..     268     296 ..     237     305 .. 0.75
   3 ?   -2.5   0.1      0.39   3.5e+03      16      40 ..     316     343 ..     310     369 .. 0.56

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.17
     Saf_2TM 66 ivlaiilvigvllivvGavllilry 90
                iv+++ l+i++l+++ +++  +lry
  EPX71794.1 64 IVFVFQLFIFSLFTI-CILFRFLRY 87
                677888888877654.566666666 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 1.4e-05
     Saf_2TM  57 sfssseipeivlaiilvigvllivvGavl 85 
                  f s+++pe++l+i++++++++i++Ga+ 
  EPX71794.1 268 IFVSKNSPEWLLFICTFLAIFMIALGAFN 296
                 4778889*******************975 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 0.39
     Saf_2TM  16 fRkrsaelllftigvalllailgt...d 40 
                 f+ + +++++ ++g ++++  lg    +
  EPX71794.1 316 FKVSWFAMIFANGGLVMVIQELGKavdS 343
                 5555555655555555555555543333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (438 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       823  (0.0459033); expected 358.6 (0.02)
Passed bias filter:                      267  (0.0148921); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 3095.37
//
Query:       EPX71795.1  [L=485]
Description: dihydrolipoamide S-acetyltransferase E2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-80  270.3   0.1    1.6e-80  269.9   0.1    1.2  1  2-oxoacid_dh   2-oxoacid dehydrogenases acyltransferase (cata
    1.8e-17   62.9   0.4    4.8e-17   61.5   0.4    1.8  1  Biotin_lipoyl  Biotin-requiring enzyme
    2.5e-16   59.7   0.1    1.1e-15   57.6   0.1    2.3  1  E3_binding     e3 binding domain


Domain annotation for each model (and alignments):
>> 2-oxoacid_dh  2-oxoacid dehydrogenases acyltransferase (catalytic domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  269.9   0.1   2.7e-84   1.6e-80       3     233 .]     256     485 .]     254     485 .] 0.95

  Alignments for each domain:
  == domain 1  score: 269.9 bits;  conditional E-value: 2.7e-84
                   XXXXXXXXXXXXXXXXXXXXXX.XXXEEEEEEEEE-HHHHHHHHHHHHHHHHTT-----HHHHHHHHHHHHHHH-GGGG-EE.EESEEEE--SS--E CS
  2-oxoacid_dh   3 eeervplsgirkaiakrlteskqeiphftlsdevdvtallelrkelkekeakeekakltlldflikavalAlkefPelnasvdeeekeivvkkhvni 99 
                   + e+ pls++rk+ia+rlteskq  ph+++s+ +d++++++lr+ l++ +  +  +kl+++d++ikav++Al+e+Pe+n+ + +e   i+++k+v+i
    EPX71795.1 256 TFEDLPLSNMRKIIASRLTESKQVNPHYYVSVAIDAEKIVRLRAALNSMADGR--YKLSVNDLVIKAVTAALREVPEVNSAWMGEF--IRQYKNVDI 348
                   67899*******************************************98643..5******************************..********* PP

                   EEE--------EEEE--GGG--HHHHHHHHHHHHHHHTTT---GGGTSS-SEEEE---------------TT-SEEEEE---.B--TT.STT-..HT CS
  2-oxoacid_dh 100 GvAvatprGLlvPviknadkkslleiakelkelaekaregklkpedleggtftisNlGmlGvtsftPiinppqvaIlgvgrikerpvv.kege..lv 193
                   ++Avatp GL++Pvi+na+ ++l ei++  k++ ++ar +klkpe+++ggtftisNlGm+ v++ft+iinppq+ Il+vg+++e+ v  k  e  ++
    EPX71795.1 349 SMAVATPSGLVTPVIRNAQGLGLREISNMAKDYGQRARINKLKPEEYQGGTFTISNLGMFPVDQFTAIINPPQAGILAVGTVNETVVPdKTSEkgFK 445
                   **********************************************************************************8887765444377** PP

                   ---EEEEEEEEETTT--HHHHHHHHHHHHHTT-HHXXXXX CS
  2-oxoacid_dh 194 vrkvmtlslsaDHRvidGaeaarFlntlkkllenpeelll 233
                   ++++m+++lsaDHRv+dGa aarF+++lkk++enp elll
    EPX71795.1 446 IAPIMKCTLSADHRVVDGAMAARFTTALKKIMENPLELLL 485
                   ************************************9985 PP

>> Biotin_lipoyl  Biotin-requiring enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.5   0.4   8.1e-21   4.8e-17       3      71 ..      57     127 ..      55     129 .. 0.97

  Alignments for each domain:
  == domain 1  score: 61.5 bits;  conditional E-value: 8.1e-21
                    EEESSSEEEEEE..ECSESSSTTCEE-TTSEEEEEECTTEEEEEEBSSSEEEEEESSTTTEE.E-TTCEEE CS
  Biotin_lipoyl   3 iksPmiGesveeg.vvevlvkvGdkVkagqvlaeveamKmemeieapkaGvvkeilvkeGdt.vevgdlla 71 
                    +++P++++++++g + ++ ++vGdk++ g+vl+e+e++K++m++e +++G++++ilv+ G++ v vg+++a
     EPX71795.1  57 LNMPALSPTMTAGnIGAYQKSVGDKIEPGDVLCEIETDKAQMDFEQQDEGYLAKILVETGAKdVPVGKPVA 127
                    689******************************************************************98 PP

>> E3_binding  e3 binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.6   0.1   1.9e-19   1.1e-15       1      36 []     188     223 ..     188     223 .. 0.98

  Alignments for each domain:
  == domain 1  score: 57.6 bits;  conditional E-value: 1.9e-19
                 SBE-HHHHHHHHHCT--TTTS---CTTTBE-HHHHC CS
  E3_binding   1 vlAsPaaRklAkelGidLsdvkGtGpgGRItkeDVl 36 
                 ++AsP a+klA+e+G++Ls++ G+Gp+GRI+k DV+
  EPX71795.1 188 IFASPIAKKLAEEKGVNLSQIRGSGPNGRIIKVDVE 223
                 79*********************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (485 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       573  (0.0319594); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.45
# Mc/sec: 3224.89
//
Query:       EPX71796.1  [L=801]
Description: hypothetical protein SOCG_03733 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (801 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       618  (0.0344693); expected 358.6 (0.02)
Passed bias filter:                      445  (0.0248201); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.67u 0.24s 00:00:00.91 Elapsed: 00:00:00.44
# Mc/sec: 5490.80
//
Query:       EPX71797.1  [L=460]
Description: translation elongation factor EF-1 alpha Ef1a-c [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.1e-54  183.5   0.0    5.4e-54  182.7   0.0    1.4  1  GTP_EFTU     Elongation factor Tu GTP binding domain
    1.4e-40  138.1   0.0    2.8e-40  137.1   0.0    1.5  1  GTP_EFTU_D3  Elongation factor Tu C-terminal domain
      2e-13   50.5   2.0    2.7e-13   50.1   0.7    2.0  2  GTP_EFTU_D2  Elongation factor Tu domain 2
     0.0016   18.5   0.1      0.043   13.9   0.1    2.4  1  MMR_HSR1     50S ribosome-binding GTPase
  ------ inclusion threshold ------
      0.041   13.8   0.3       0.15   12.0   0.3    1.9  1  GTP_EFTU_D4  Elongation factor Tu domain 4


Domain annotation for each model (and alignments):
>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  182.7   0.0   1.5e-57   5.4e-54       3     190 ..       7     232 ..       5     236 .. 0.93

  Alignments for each domain:
  == domain 1  score: 182.7 bits;  conditional E-value: 1.5e-57
                 EEEEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHH.HHHST............HCHSHHHHHHTSCSSCEEEEEETTCSSEEEEEEEESSSGGGHHHHH CS
    GTP_EFTU   3 irnigiighvDhGKtTLtdrLlyktgaiskkgeka.eeerv............lDtlkeErergiTiksaaisleketkkylinliDtPGHvdFskevi 88 
                 ++ni++ighvD+GK+T+t++L+yk+g i+k++ ++ e+e++            lD+lk+ErergiTi++a +++e  t ky +++iD+PGH+dF+k++i
  EPX71797.1   7 HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKfEKEATelgkgsfkyawvLDKLKAERERGITIDIALWKFE--TPKYYVTVIDAPGHRDFIKNMI 103
                 99*********************************644555799*******************************..********************** PP

                 HHHHT-SEEEEEEETTTB.......STHHHHHHHHHHHHTTTE.EEEEEESCGST...HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEBTT CS
    GTP_EFTU  89 rglrvlDgavlvvdaveG.......vepqteevlrlalkegvp.iivfiNKmDrl...kaelkeiveevkqklsrkeeklekygekgekevpvvfgSal 176
                 +g++++D+a+l++    G          qt+e++ la ++gv+ +iv++NKmD +   +a+++ei++e + ++      ++k+g++ + +vp+v++S++
  EPX71797.1 104 TGTSQADCAILIIGGGTGefeagisKDGQTREHALLAYTLGVKqLIVAVNKMDSVqysQARFEEIIKETS-NF------VKKVGFNPK-TVPFVPVSGF 194
                 ****************9999999999*******************************9***********9.88......89*****96.********** PP

                 TTBTHH........................HHHHHHHH CS
    GTP_EFTU 177 kgegvk........................tllealve 190
                 +g+++                         tllea++ 
  EPX71797.1 195 QGDNMIepttnmtwyqgwqkeskagvvkgkTLLEAIDA 232
                 ***88777777778888888888888888888888876 PP

>> GTP_EFTU_D3  Elongation factor Tu C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.1   0.0   7.8e-44   2.8e-40       4     111 ..     334     439 ..     331     440 .. 0.98

  Alignments for each domain:
  == domain 1  score: 137.1 bits;  conditional E-value: 7.8e-44
                  EECCEEEEEEESSS..SS-BSTT-EEEEESSS-EEEEEEEEEEECCSSTTSB-BSS-SSCCSTT-CEEEEEEECCEEEE--TTTHCCCCEEEEECTTC CS
  GTP_EFTU_D3   4 phtkfeAqvyilekerhtpitagYrpvlyirtadvtgkvveLlskldkktekvsekkpefvkpGdnvivevelikpialekgseypqlGrFaiReggr 101
                   +++f+Aqv+il++  +++i agY+pvl+++t+++++++ eL++k+d++t+k+ e+ p+fvk+Gd++i+++ ++kp+++e +++y +lGrFa+R++++
   EPX71797.1 334 GCANFTAQVIILNH--PGQISAGYSPVLDCHTSHIACRFNELIEKIDRRTGKKIEEAPKFVKSGDACIAQMIPTKPMCVEAFTDYAPLGRFAVRDMRQ 429
                  5889**********..********************************************************************************** PP

                  EEEEEEEEEE CS
  GTP_EFTU_D3 102 TvaaGvvtei 111
                  Tva+Gv++ +
   EPX71797.1 430 TVAVGVIKAV 439
                  *******988 PP

>> GTP_EFTU_D2  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       3.7   1.3e+04      19      35 ..      10      24 ..       9      32 .. 0.71
   2 !   50.1   0.7   7.6e-17   2.7e-13       1      72 [.     258     323 ..     258     325 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 3.7
                 EEEEC.TCTTSEEEEEEE CS
  GTP_EFTU_D2 19 vrilg.ndtskkeivtri 35
                 ++++g +d++k+   t+ 
   EPX71797.1 10 IVVIGhVDSGKS---TTT 24
                 566677888888...665 PP

  == domain 2  score: 50.1 bits;  conditional E-value: 7.6e-17
                  EEEEEEEEEESEEETTEEEEEECTCTTSEEEEEEEEEEEEETEEESEEETTSEEEEEEEESSCCSGSSTTCE CS
  GTP_EFTU_D2   1 GtvalgrvysGtlkkGdevrilgndtskkeivtrissletfhededeavaganaGvivaikgledaiivGdt 72 
                  Gtv  grv++G +k+G+ v +   +++ +   t+++s+e++he +d   +g+n+G++v+ + ++d i++G++
   EPX71797.1 258 GTVPVGRVETGAIKPGMVVTF--APSGVT---TEVKSVEMHHESLDAGLPGDNVGFNVKNVSVKD-IRRGNV 323
                  99*******************..666566...*********************************.****98 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.1   1.2e-05     0.043       2      83 ..      10     116 ..       9     180 .. 0.64

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.2e-05
                 EEEEESTTSSHHHHHHHHH...............T................STEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHHHHHHH CS
    MMR_HSR1   2 vaivGrpNvGKStLinalt...............g................ekaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseekglgka 69 
                 ++++G+  +GKSt    l+               +                +k +++++ g T+di   ++++ +  ++++D pG          +++ 
  EPX71797.1  10 IVVIGHVDSGKSTTTGHLIykcggidkrtiekfeKeatelgkgsfkyawvlDKLKAERERGITIDIALWKFETPKYYVTVIDAPGH-R-----DFIKNM 102
                 78999999999999999986666555555554440444555556656555468899999999999999999977889********3.1.....123333 PP

                 HHHHHCTSEEEEEE CS
    MMR_HSR1  70 flaleeadlillvv 83 
                 +    +ad ++l++
  EPX71797.1 103 ITGTSQADCAILII 116
                 33333445555444 PP

>> GTP_EFTU_D4  Elongation factor Tu domain 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.3   4.1e-05      0.15      21      81 ..     262     320 ..     257     324 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 4.1e-05
                  EEEEEEEEEEETT-EEEETTE.EEEEEEEEEETTEEESEEETT-EEEEEEESS-TTTS--T CS
  GTP_EFTU_D4  21 vGvevlgGvikpgvklikedGrevGeilqiqdkgkkleeakaGqevaisiegkivGrqike 81 
                  vG +v +G ikpg+ +  +      e+++++ ++++l+    G++v+  +++    ++i  
   EPX71797.1 262 VG-RVETGAIKPGMVVTFAPSGVTTEVKSVEMHHESLDAGLPGDNVGFNVKNVS-VKDIRR 320
                  88.9**********99765555788**********************9999754.355555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (460 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       491  (0.0273858); expected 358.6 (0.02)
Passed bias filter:                      429  (0.0239277); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 3275.50
//
Query:       EPX71798.1  [L=331]
Description: hypothetical protein SOCG_03735 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-19   70.9   0.0    2.1e-19   70.2   0.0    1.4  1  Q_salvage  Potential Queuosine, Q, salvage protein family
  ------ inclusion threshold ------
      0.041   13.2   0.0      0.077   12.3   0.0    1.4  1  AGOG       N-glycosylase/DNA lyase


Domain annotation for each model (and alignments):
>> Q_salvage  Potential Queuosine, Q, salvage protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.2   0.0   2.4e-23   2.1e-19      74     265 ..     132     312 ..      89     326 .. 0.81

  Alignments for each domain:
  == domain 1  score: 70.2 bits;  conditional E-value: 2.4e-23
   Q_salvage  74 e...eelkkvfrsateeeiplleeRlellreagkvll.ekfdgsfvnlikk.anksaakLvnlvveefpsFrDeavyegkkvrlyKRAqilvaDlwaaf 167
                 e   e+l  vf+ ++++ + l+++ + +l+ +g++l  ++f++  + +++   +k+ + L++ + ++fp F+D  ++ gk+v+l+K+Aq+ +  l   +
  EPX71798.1 132 EtpvESLPGVFAVSSSHLMELVKKMTFVLNTTGEILKmKNFSSLGEFCLRYgNSKDPSILIHALSSTFPAFHDIEEVYGKEVYLLKKAQVTAYQLSLLY 230
                 13468888999999999999999*************834666666666666345667889********************************9998887 PP

   Q_salvage 168 egeglgefedidkltmfADyrvpqvLrqlgvLeyseeLekklkekellesgseeeveiRacsiwavelireeiekkkeeakekvnailiDffLwdlak 265
                     +g+    + l +fAD+ +p vL+ +g+L+   eL++kl++k+lle++  e   +Ra s+ ++eli e+++         + + ++D  Lw+l+k
  EPX71798.1 231 PD-RFGR----QGLCIFADNVIPTVLYLYGILKIPAELKEKLENKKLLEKE--EITVLRASSVFVCELISERTK---------IPSPQLDQALWKLGK 312
                 66.5665....78***********************************864..44569***********99876.........555567777777665 PP

>> AGOG  N-glycosylase/DNA lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   8.6e-06     0.077     192     233 ..     271     314 ..     256     323 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 8.6e-06
                 HHHHTHCCHC..S.HHHHHHHHHHHHT--HHHHHHHHHHHCCHH CS
        AGOG 192 kklarkelvq..eevieaWkevsreseiPplhlDsllWvlgksa 233
                 k l+++e++   ++ + + + +s++++iP  +lD  lW lgk +
  EPX71798.1 271 KLLEKEEITVlrASSVFVCELISERTKIPSPQLDQALWKLGKFS 314
                 444444444444666667789*****************999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       502  (0.0279993); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.70u 0.35s 00:00:01.04 Elapsed: 00:00:00.60
# Mc/sec: 1668.44
//
Query:       EPX71799.1  [L=499]
Description: UTP-glucose-1-phosphate uridylyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   4.7e-158  526.2   0.0   5.5e-158  525.9   0.0    1.0  1  UDPGP     UTP--glucose-1-phosphate uridylyltransferase
  ------ inclusion threshold ------
      0.047   13.4   2.4        3.9    7.3   0.5    2.7  2  Hexapep   Bacterial transferase hexapeptide (six repeats)


Domain annotation for each model (and alignments):
>> UDPGP  UTP--glucose-1-phosphate uridylyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  525.9   0.0  6.2e-162  5.5e-158       1     413 []      51     464 ..      51     464 .. 0.98

  Alignments for each domain:
  == domain 1  score: 525.9 bits;  conditional E-value: 6.2e-162
       UDPGP   1 lesFkklferyleekskqekidwdkieplpeeevvdyedlkekeeekkellnklavlkLnGglGtsmGckgpKslieVrdgktfLdlivqqieelnkky 99 
                 +e+F++l++ryl ++ k  ++dwd+i+pl +++v+dy +l ++ +e++++l+++avlkLnGg+G+smG+++pK+lie +  +tfLdl++qq+++lnk+y
  EPX71799.1  51 MENFFALYRRYLLHTVKGYECDWDSIRPLGPQDVTDYTSL-TPCKEESQYLDRVAVLKLNGGMGNSMGVNKPKALIELHGSQTFLDLSIQQVDYLNKRY 148
                 789*************************************.7788899*************************************************** PP

       UDPGP 100 nvdvPlvlmnSfnTdedtekilkkykkkkvdiltfnqsryPriskesllpvekkakkeekeewyPpGhGdlyesLknsglldkllaeGkeyiFvsniDN 198
                 +v vP++lmnS+ T+++t k+l+ky++ + di tf+qsryPr+s  s+lpv+k a ++  eewyPpGhGd++e+L++sg++d+lla+Gk+y+FvsniDN
  EPX71799.1 149 EVAVPFLLMNSCDTNDETCKYLRKYTGYNLDISTFEQSRYPRVSVGSQLPVPKYA-PSPIEEWYPPGHGDVFEALVHSGIIDRLLAQGKDYLFVSNIDN 246
                 ****************************************************999.6899*************************************** PP

       UDPGP 199 lgatvDlkilnllvekkaeflmevtektradvkgGtlieyegklrlleiaqvpkehveefksvkkfkifntnniwinlkalkrlveekelkleiivnkk 297
                 lga vDl++l++++e+++e++mevt+kt+advk+G+l++++g lrlle +qvp++h+eef+s + fk++ntnn+w+ l+a+kr+ve++el+l+i+ n +
  EPX71799.1 247 LGASVDLRLLSHVIENEIEYAMEVTDKTKADVKVGILVNQDGILRLLERNQVPEKHQEEFTSDRIFKYINTNNVWLYLPAVKRVVENRELNLDIMPNIE 345
                 **************************************************************************************************9 PP

       UDPGP 298 tld.egek..viqletavgaaiksFkkavginVpRsrflpvkttsdlLlvksdlysleegslvlnpkrsfktvplvkLgsefkkveefqkrfksipsll 393
                  ++ ++e+  vi++ t++g+ai++Fkk+ gi+V R+rf++vkt+ dlLlv+ dlys+++gsl++++++   + p+v+L++ef++v+e+ +r++++ps++
  EPX71799.1 346 IINrNDEStrVIEFTTSIGSAISQFKKTEGIKVTRERFISVKTSADLLLVRGDLYSIDHGSLKPDESKVGFSPPVVNLTNEFTDVAELFRRIPHMPSIK 444
                 9995444478***************************************************************************************** PP

       UDPGP 394 eldhltvsGdvtfgknvtLk 413
                 +l++l++sG+v+fgknv+Lk
  EPX71799.1 445 DLTSLSISGNVYFGKNVVLK 464
                 ******************98 PP

>> Hexapep  Bacterial transferase hexapeptide (six repeats)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.5   0.00044       3.9       3      22 ..     450     469 ..     448     469 .. 0.87
   2 ?    5.2   0.1    0.0021        19       6      24 ..     481     498 ..     476     499 .] 0.68

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.00044
                 EEETTEEE-TTEEEETTEEE CS
     Hexapep   3 vIGsnvlIgpfaviggnVkI 22 
                  I  nv+ g+++v+ gnV+I
  EPX71799.1 450 SISGNVYFGKNVVLKGNVVI 469
                 67789999**********98 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0021
                 TTEEE-TTEEEETTEEE-T CS
     Hexapep   6 snvlIgpfaviggnVkIGd 24 
                  n+++  ++v+ gn+kI d
  EPX71799.1 481 PNAVLE-NCVVSGNCKIMD 498
                 455555.899999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (499 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       554  (0.0308997); expected 358.6 (0.02)
Passed bias filter:                      468  (0.026103); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.69u 0.33s 00:00:01.02 Elapsed: 00:00:00.54
# Mc/sec: 2758.68
//
Query:       EPX71800.1  [L=465]
Description: ENTH/VHS domain-containing protein Ent3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.9e-44  150.7   0.4    2.7e-44  150.2   0.4    1.2  1  ENTH       ENTH domain
    3.6e-05   22.9   0.1    5.4e-05   22.3   0.1    1.3  1  ANTH       ANTH domain
  ------ inclusion threshold ------
      0.059   13.2   0.1      0.096   12.5   0.1    1.3  1  VHS        VHS domain
        1.6    9.3  13.7       0.11   13.1   7.7    2.1  1  CEND1      Cell cycle exit and neuronal differentiation prote
        8.1    6.6   6.2    1.2e+02    2.9   6.3    2.4  1  DSS1_SEM1  DSS1/SEM1 family


Domain annotation for each model (and alignments):
>> ENTH  ENTH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.2   0.4   7.6e-48   2.7e-44       1     124 [.      30     153 ..      30     154 .. 0.99

  Alignments for each domain:
  == domain 1  score: 150.2 bits;  conditional E-value: 7.6e-48
                 --HHHHHHHHHTSSSSSS--HHHHHHHHHHTTSHHHHHHHHHHHHHHHHH--GGGHHHHHHHHHHHHHHHHHS-HHHHHHHHHTHHHHHGGGG---B-T CS
        ENTH   1 yseteskvreatnndpwGpsnkllteiarltyskkelseiisvitkrLqnnkgkewrsvlKaLtlieYLlknGseqvidwlkenisiiktlsefkyide 99 
                 y++te+kvreatnn+pwG+s++l+ eia+ t+++++l+ei+ ++++r+++++ +ewr+++KaL+l+e+L+knGse+vid+++++ ++ik+l++f+yid 
  EPX71800.1  30 YTSTEAKVREATNNEPWGASTSLMMEIAQGTHNYSQLNEIMPMVYRRFTEKTAEEWRQIYKALQLLEFLVKNGSERVIDDARAHQATIKMLRNFHYIDR 128
                 799************************************************************************************************ PP

                 TS-B-HHHHHHHHHHHHHHHT-HHH CS
        ENTH 100 egkdeglniRkkakkiislledeer 124
                  ++d+gln+R +ak++++ll+d++r
  EPX71800.1 129 YQRDQGLNVRTRAKELVELLNDNDR 153
                 **********************997 PP

>> ANTH  ANTH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.1   1.5e-08   5.4e-05       3     112 ..      34     142 ..      32     181 .. 0.84

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 1.5e-08
                 HHHHHHHT-SSS---HHHHHHHHHHHCSTTS-HHHHHHHHHHHCTSS...SHHHHHHHHHHHHHHHHHS-CHHHHHHHHTT-----TT---TSHHHSTH CS
        ANTH   3 evavvKAtshdevPpkekhvreilvltssrekvaalvwalsrrlklt..rnwvvalKaLilvHklLreGhpsveqellsarrrisellnlssfddsssk 99 
                 e+ v+ At+ +   + + ++ ei  +t++ +++++++ ++ rr +++  ++w + +KaL l+  l + G+++v+ ++ +++ +i+ l n++      + 
  EPX71800.1  34 EAKVREATNNEPWGASTSLMMEIAQGTHNYSQLNEIMPMVYRRFTEKtaEEWRQIYKALQLLEFLVKNGSERVIDDARAHQATIKMLRNFHYI---DRY 129
                 567999*************************************97652268*************************************99994...357 PP

                 HHHHHHHHHHHHH CS
        ANTH 100 swdysafiraYak 112
                 ++d++ ++r+ ak
  EPX71800.1 130 QRDQGLNVRTRAK 142
                 8888888887555 PP

>> VHS  VHS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   2.7e-05     0.096      58     120 ..      86     151 ..      31     165 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 2.7e-05
                 HHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHHC.TTTCHCS....HHHHHHHHHHHHHHH CS
         VHS  58 hvallaLklldalvkNcGskfhleiaskeflnelvklile.kknsklak...vkkkvlelleeWada 120
                   ++ aL+ll+ lvkN+ +++++     + + ++++ +     ++++ +   v+++++el+e ++d+
  EPX71800.1  86 RQIYKALQLLEFLVKNGSERVIDDARAHQATIKMLRNFHYiDRYQRD-QglnVRTRAKELVELLNDN 151
                 45789****************99876666555555544330333333.2366999999999988765 PP

>> CEND1  Cell cycle exit and neuronal differentiation protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   7.7     3e-05      0.11       8     108 ..     222     324 ..     216     338 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 3e-05
       CEND1   8 asspkadakataea.kgkPaadgkaPsakadkketpaekqeqp.aaPatapakktpakadpallnnhsnlkPapaaaeapsspdatpepkgpgdgaeed 104
                  ss  +d+   +e  + + + d+++Psa++++  + + ++ qp aaP ++p+k+ + +a + ll       Pap++++ p  ++   + +g gd    +
  EPX71800.1 222 DSSSYSDTHDHSEYdEYNENYDSAGPSARTSRLSARTTRNSQPtAAPVSSPPKQEQQSAVADLLGLEEPATPAPTSSTIPTYANTVEDDDGFGDFQTSS 320
                 5677777775555414556789************998777766268********99999999***********************99*99999987776 PP

       CEND1 105 eaas 108
                  a++
  EPX71800.1 321 AAPT 324
                 5444 PP

>> DSS1_SEM1  DSS1/SEM1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   6.3     0.033   1.2e+02       6      50 ..     304     340 ..     301     343 .. 0.65

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.033
                 HHHHHHTTSTTHHHHH----------..---BESSTTTSCGGCHH CS
   DSS1_SEM1   6 lklLeeDDEFEeFpvedwdeeeeeakeekklWednWDDddveddF 50 
                 ++++e+DD F +F++ + + +   ++  +       DDdd  ddF
  EPX71800.1 304 ANTVEDDDGFGDFQTSSAAPTAAATS--A------NDDDDAFDDF 340
                 5789**********987744444322..1......1555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (465 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       843  (0.0470188); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.57u 0.28s 00:00:00.85 Elapsed: 00:00:00.47
# Mc/sec: 2990.33
//
Query:       EPX71801.1  [L=561]
Description: malic enzyme [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      7e-96  320.4   0.1    9.3e-96  320.0   0.1    1.2  1  Malic_M   Malic enzyme, NAD binding domain
      6e-58  195.6   0.0    9.1e-58  195.0   0.0    1.3  1  malic     Malic enzyme, N-terminal domain


Domain annotation for each model (and alignments):
>> Malic_M  Malic enzyme, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  320.0   0.1     1e-99   9.3e-96       1     257 [.     270     527 ..     270     528 .. 0.99

  Alignments for each domain:
  == domain 1  score: 320.0 bits;  conditional E-value: 1e-99
                 THHHHHHHHHHHHHHHHHH-S-GGG--EEEEC-SHHHHHHHHHHHHHHHTTTS-HHHHHTTEEEEETTEE-BTT-S--.-TTTGGGSBS--SS--S... CS
     Malic_M   1 iqgTaavalagllaalkitgkklseqkivvlGaGsagiGiaeqivealvkeGlseeeakkkiylvDrkGLltedrekl.eeekkpfakkkeelkeakdk 98 
                 iqgT+avala+++aal++t+++l+eq+i+++GaG+agiGia+qi++alv +Gls+++a ++iylvDr+GLl e+++++ +e +kpf kk++++++ +++
  EPX71801.1 270 IQGTGAVALAAIVAALQVTKSPLTEQRIMIFGAGTAGIGIANQITSALVGDGLSKQQAIDHIYLVDRYGLLLEKHADVaTEDQKPFLKKNDSFQDINGD 368
                 9**************************************************************************9984799***************** PP

                 .SHHHHHHHH--SEEEE-SSSSS-S-HHHHHHHHHHSSS-EEEE--SSGGGSSS-HHHHHHHTTT-SEEEESS----EEETSEEE--EE--GGGTHHHH CS
     Malic_M  99 ltLeevvkkvkptvliGlsgvagafteeivremaksterPiilplSNPtskaEataedvlkwtdgkalvasGsPfkpvelngktyeigQaNNayifPgl 197
                 ++Le+++++vkpt+l+G+sg++g fte ++remak++e+Pii+p+SNPt+ +Ea+++++ +wt+gkal+a+GsP++p++ ngk+y i+Q+NNa+++P+l
  EPX71801.1 369 VDLETAISRVKPTILLGCSGQPGKFTERAMREMAKHVEQPIIFPISNPTKLMEAKPDQINEWTNGKALMATGSPLPPIKRNGKEYIISQCNNALLYPAL 467
                 *************************************************************************************************** PP

                 HHHHHHTT-SS--HHHHHHHHHHHHTT--HHHHHTT-SS--GGGHHHHHHHHHHHHHHHH CS
     Malic_M 198 glgvivarakritdemllaaaealaelvseeelkegsllPelseirevslkvavavakaa 257
                 g+g++++++k +td+m++aa++ala++ ++   +e++llP+l++ re+s+++++av+k+a
  EPX71801.1 468 GVGCVLSGCKFLTDTMMKAASDALATVPKNLFKSEEALLPDLNNAREISRHITLAVLKQA 527
                 **********************************************************98 PP

>> malic  Malic enzyme, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  195.0   0.0     1e-61   9.1e-58       3     181 ..      79     259 ..      77     260 .. 0.98

  Alignments for each domain:
  == domain 1  score: 195.0 bits;  conditional E-value: 1e-61
                 TECCCCCCHHCCCHHHHHHHHSTTCHHHHHHHHHHHGGCHHSCCCEGGGET..CHHHHHTTSS..SS..EEEEE-SSSBTTTBS-GHHHHHHHHHHHHH CS
       malic   3 knetlfykllkekleellpivYtPtvgeacqeyseeyrkarglylsikdke..kikeilknlp.eedvkvivvtdgeriLGlGdlGvagvgimvGKlaL 98 
                 +n+tlfy+l++++l e++pi+YtPt g+a+ ++s+ yr+++g++l+i++k+   ik++l+ +  ++++k+i+ td+e+iLG+Gd+Gv+gv i+v+K +L
  EPX71801.1  79 RNQTLFYALISQHLVEMIPIIYTPTEGDAIMQFSDVYRYPEGCFLDIDHKDpqYIKNQLSAFGtKDSIKYIILTDSEGILGIGDQGVGGVLISVAKGHL 177
                 89*******************************************999887769********97999******************************** PP

                 HHHHHS-EGGGEEEEEECS-BS.HHHHC.TT..S.SSB...SHHHHHHHHHHHHHHHHHHGCTSEEEE-S--CCHHHHHHHHH CS
       malic  99 ytalagidPekvlpvvldvgtnneelledplYlGlrkkRvkgeeydefvdefveavkelfppkaliqfEDfkaknafeilery 181
                 +t +ag+dP+ +lp+vldvgt+n++++++p+Y+Gl+++Rv+geeyd+ +  +++ ++e+f p+a+i+fEDf+ kna +il+ y
  EPX71801.1 178 MTLCAGLDPNCFLPIVLDVGTDNQKHRSNPQYMGLKRDRVRGEEYDQYLSTVLRSIREVF-PHAFIHFEDFGLKNAKRILDEY 259
                 ************************************************************.9*******************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (561 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       543  (0.0302861); expected 358.6 (0.02)
Passed bias filter:                      487  (0.0271627); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.29s 00:00:00.85 Elapsed: 00:00:00.45
# Mc/sec: 3720.99
//
Query:       EPX71802.1  [L=80]
Description: hypothetical protein SOCG_05412 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       253  (0.0141112); expected 358.6 (0.02)
Passed bias filter:                      197  (0.0109878); expected 358.6 (0.02)
Passed Vit filter:                         8  (0.000446204); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.42
# Mc/sec: 574.53
//
Query:       EPX71803.1  [L=85]
Description: hypothetical protein SOCG_03739 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       399  (0.0222544); expected 358.6 (0.02)
Passed bias filter:                      239  (0.0133304); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.24s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 632.09
//
Query:       EPX71804.1  [L=520]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.039   14.2   0.7       0.12   12.6   0.5    1.9  1  RAI1      RAI1 like PD-(D/E)XK nuclease


Domain annotation for each model (and alignments):
>> RAI1  RAI1 like PD-(D/E)XK nuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.5   6.6e-06      0.12      34      52 ..      89     107 ..      84     112 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 6.6e-06
                 HHHHHHHHHHHHHHHHHT- CS
        RAI1  34 ekferKllkfWaQSfLlGi 52 
                  +fe+Kl +fW+ +fLl +
  EPX71804.1  89 SRFEKKLSNFWLRNFLLQV 107
                 59**************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (520 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       960  (0.0535445); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 3793.85
//
Query:       EPX71805.1  [L=109]
Description: transcription factor TFIIA complex small subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.9e-25   88.6   0.1    2.9e-25   88.0   0.1    1.3  1  TFIIA_gamma_N  Transcription initiation factor IIA, gamma sub
    1.9e-23   82.4   1.3      3e-23   81.7   1.3    1.3  1  TFIIA_gamma_C  Transcription initiation factor IIA, gamma sub


Domain annotation for each model (and alignments):
>> TFIIA_gamma_N  Transcription initiation factor IIA, gamma subunit, helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.0   0.1   3.3e-29   2.9e-25       1      47 [.       4      50 ..       4      51 .. 0.98

  Alignments for each domain:
  == domain 1  score: 88.0 bits;  conditional E-value: 3.3e-29
  TFIIA_gamma_N  1 yYelYRrstlGtaLtdaLDeliqegkIspqlamkVLeqFDksineaL 47
                   yYelYRrs++G +LtdaLD+li++gkIspqlamkVL +FDks++eaL
     EPX71805.1  4 YYELYRRSSIGISLTDALDDLISQGKISPQLAMKVLFNFDKSMTEAL 50
                   8*********************************************9 PP

>> TFIIA_gamma_C  Transcription initiation factor IIA, gamma subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.7   1.3   3.4e-27     3e-23       1      44 [.      59     101 ..      59     102 .. 0.98

  Alignments for each domain:
  == domain 1  score: 81.7 bits;  conditional E-value: 3.4e-27
  TFIIA_gamma_C   1 tfKgkLdtYrfcDdVWtFiiknvefklendetvkvdkvKIVACn 44 
                    tfKg+LdtYrfcD+VWtFiikn +f+++n etv+ +k++IVAC 
     EPX71805.1  59 TFKGHLDTYRFCDEVWTFIIKNPNFRFDN-ETVTSNKIRIVACA 101
                    8***************************9.*************5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       410  (0.022868); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.20s 00:00:00.59 Elapsed: 00:00:00.37
# Mc/sec: 877.26
//
Query:       EPX71806.1  [L=244]
Description: hypothetical protein SOCG_03742 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.6e-08   33.7   1.2    4.6e-08   33.7   1.2    2.2  3  GPI-anchored  Ser-Thr-rich glycosyl-phosphatidyl-inositol-anc


Domain annotation for each model (and alignments):
>> GPI-anchored  Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.7   1.2   2.6e-12   4.6e-08       1      93 []      21     111 ..      21     111 .. 0.94
   2 ?   -1.9   0.1      0.32   5.8e+03      62      62 ..     146     146 ..     125     176 .. 0.56
   3 ?   -1.8   1.3       0.3   5.4e+03      36      49 ..     199     212 ..     145     223 .. 0.66

  Alignments for each domain:
  == domain 1  score: 33.7 bits;  conditional E-value: 2.6e-12
  GPI-anchored   1 tsPssgevvtagkpvtitWkdsgtdpgtvtlvLcagssnnlksvktiasgiknsdgsytwtvpaslesggaYflqivsesne.giynySdrFti 93 
                   tsPs g+ ++  +  ti+W+ + td++ v ++L +  +   +s+ ++++++++++gs+t++  ++ ++gg++ +++ + +++ +iy++Sd Ft+
    EPX71806.1  21 TSPSEGTHWEIKEDHTISWSYVPTDKTFVGVYLTNYFK--FPSLNKLIAKVNTTEGSVTVST-NDWPTGGGFRINLGNPESAeEIYAQSDEFTL 111
                   79*********************************999..99******************99.7899999*******666666*********96 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.32
  GPI-anchored  62 v 62 
                    
    EPX71806.1 146 T 146
                   1 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 0.3
  GPI-anchored  36 gssnnlksvktias 49 
                   g+s+n +s +t a+
    EPX71806.1 199 GNSSNSTSSTTAAQ 212
                   23333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       943  (0.0525964); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.28s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 1652.37
//
Query:       EPX71807.1  [L=575]
Description: DNA polymerase alpha B-subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.8e-42  144.4   0.4    4.6e-42  143.8   0.4    1.3  1  DNA_pol_E_B    DNA polymerase alpha/epsilon subunit B
    5.5e-34  118.2   3.2    3.1e-22   79.8   0.4    2.2  2  Pol_alpha_B_N  DNA polymerase alpha subunit B N-terminal
  ------ inclusion threshold ------
      0.024   15.3   0.1      0.048   14.3   0.1    1.4  1  AKNA           AT-hook-containing transcription factor


Domain annotation for each model (and alignments):
>> DNA_pol_E_B  DNA polymerase alpha/epsilon subunit B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.8   0.4   7.6e-46   4.6e-42       1     211 []     307     519 ..     307     519 .. 0.97

  Alignments for each domain:
  == domain 1  score: 143.8 bits;  conditional E-value: 7.6e-46
                  EEEEES--S-TT----HHHHHHHHHHH.HTT--SEEEEES-SSBTTSHHHHHT---.S--SSHHHHHHHHTHHHHTTS-TTSEEEEE--TTBTT-S.- CS
  DNA_pol_E_B   1 vvivsglnldndnrsleaLrkiLqgyapeesppdvlilaGnfvdaahkaiasskvs.tdekkenfdalalllsilesllekttvvlvPgpnDpans.t 96 
                  ++++sg++  +d++s+++L+ ++++    e+p d++il+G+f+d++h+   +++++ t++++ +  +++++++il++++  ++++lvP++nD++++ +
   EPX71807.1 307 IYVASGPWSLRDDLSFTPLKALVSYLI--ENPADLVILTGPFIDINHPILSTGNITdTQATSLEDFFKERVTPILSKIS--CKCILVPHINDAISNhP 400
                  689************************..**********************9999977777788889999********9..***************9* PP

                  SBSB----TTTTT--TTT...EEE--BSEEEEETTEEEEE--S-HHHH---EEESHHHHHS-HHHHHHHHHHHHTBS---SS.........--B-GGG CS
  DNA_pol_E_B  97 vlPqqPlprlllsrikrvfkelklvtNPsrielnsvevvltsddivkdlkreslkesntdverlrklvktildqrhlaPlap.........tlrpvsw 185
                  ++Pq+ ++r  l+ +++    +++++NP+ +++n+v ++l+++di+ ++++e+l +++++ + +++lv ++++qrh++Pl+p         +  ++ +
   EPX71807.1 401 AWPQDTFDRYTLDLPSN----FTCFPNPCIFSVNEVVFGLSTNDILLHTSKEELFRNPKHGNLFSRLVAHVIHQRHFYPLFPggsldrgnpSNIDIAH 494
                  *************9999....89*************************************************************************** PP

                  GGGGB-GGG---SEEE---SS--EEE CS
  DNA_pol_E_B 186 dkddalvleplPdvlvlpdelpeFak 211
                  +k+ +l+ +++Pd+l+lp+++++Fak
   EPX71807.1 495 LKLGELL-QTVPDILILPSDMRYFAK 519
                  ******9.899*************86 PP

>> Pol_alpha_B_N  DNA polymerase alpha subunit B N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.9   0.1   7.5e-14   4.5e-10       3     104 ..       9     101 ..       7     118 .. 0.79
   2 !   79.8   0.4   5.1e-26   3.1e-22     159     243 ..     117     199 ..      92     201 .. 0.86

  Alignments for each domain:
  == domain 1  score: 39.9 bits;  conditional E-value: 7.5e-14
                    XXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXX........XXXX...XXXXXX CS
  Pol_alpha_B_N   3 vlseleslmklhalsvedLfiKWEsfsikmkleeskkltlknlrefkkdlqdqlekraksskkpktekksaaatpraaakngdlfgmldglipstp 98 
                    +l+e ++l++ + ++ + +f+KWEs+++ ++ + +  l+l+n r+f  d+++q+e++ ++s ++k+ek+   +t+     ++ + +ml+  ip  +
     EPX71807.1   9 LLEEKNTLLQTCGMDEQMMFFKWESWCL-QRDN-KPVLNLDNFRAFAADVRTQMERQVRASLREKPEKRY-VKTK----TGMNFENMLG--IPTKS 95 
                    68888999********************.5545.555*******************77778889999998.5555....3568888887..77666 PP

                    XXXXXX CS
  Pol_alpha_B_N  99 alkkrk 104
                    + +k +
     EPX71807.1  96 HVSKDN 101
                    655544 PP

  == domain 2  score: 79.8 bits;  conditional E-value: 5.1e-26
                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--S---HHHHHHHHHHHHHHHHHHHHHHHT--GGGB--TT CS
  Pol_alpha_B_N 159 rqnpgeiletLNehlelaegpiapfselesrvkltaatDpkkykYrtMaqklsEasevLDdrIdefaeliqehyklddsefgdpa 243
                      ++g+ilet N++l+ +++ + + ++  +   ++a++Dpk+y+Yr M+qkl+++sevLDdrId f ++i +hyk++d ++ +p+
     EPX71807.1 117 TGESGRILETFNSQLSSTSALSNESKS--ASPDISAHIDPKAYHYRIMFQKLQDSSEVLDDRIDLFSDIICQHYKINDDDLVNPS 199
                    3456***************98888788..99999*************************************************97 PP

>> AKNA  AT-hook-containing transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.1     8e-06     0.048      18      93 ..     126     199 ..     117     201 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 8e-06
        AKNA  18 glrsetlaqklssskgqpgkfdpsreleaeIyqlgqrleeLkdqtdqlkqkveefskdiaqdspsplqdarlplps 93 
                    s+ + + + s +++    d s  +  + y+ +++ ++L+d  + l  ++  fs  i q   ++ +d +l++ps
  EPX71807.1 126 TFNSQLSSTSALSNESKSASPDISAHIDPKAYHYRIMFQKLQDSSEVLDDRIDLFSDIICQH--YKINDDDLVNPS 199
                 4555555555556667777778889999999*************************999887..888888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (575 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       361  (0.020135); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.23s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 4347.09
//
Query:       EPX71808.1  [L=998]
Description: GTPase Ria1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      1e-56  191.5   0.1    2.3e-56  190.4   0.0    1.6  2  GTP_EFTU     Elongation factor Tu GTP binding domain
      4e-14   52.4   0.1    1.7e-13   50.4   0.0    2.1  2  EFG_C        Elongation factor G C-terminus
    1.4e-10   41.4   0.0    3.7e-10   40.0   0.0    1.7  1  GTP_EFTU_D2  Elongation factor Tu domain 2
    1.2e-07   31.7   0.0    2.7e-07   30.6   0.0    1.6  1  EFG_II       Elongation Factor G, domain II
      0.003   17.5   0.2     0.0069   16.3   0.2    1.5  1  DASH_Spc19   Spc19
     0.0035   17.1   0.0      0.016   15.0   0.0    2.2  1  EFG_IV       Elongation factor G, domain IV
     0.0035   17.4   0.1       0.01   15.9   0.1    1.8  1  MMR_HSR1     50S ribosome-binding GTPase


Domain annotation for each model (and alignments):
>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  190.4   0.0   9.2e-60   2.3e-56       2     182 ..      18     229 ..      17     338 .. 0.86
   2 ?   -2.8   0.0       1.5   3.9e+03     105     155 ..     373     446 ..     357     475 .. 0.57

  Alignments for each domain:
  == domain 1  score: 190.4 bits;  conditional E-value: 9.2e-60
                 CEEEEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHHHHHSTHCHSHHHHHHTSCSSCEEEEEE..........TTCSSEEEEEEEESSSGGGHHHHHHH CS
    GTP_EFTU   2 rirnigiighvDhGKtTLtdrLlyktgaiskkgekaeeervlDtlkeErergiTiksaaisle..........ketkkylinliDtPGHvdFskevirg 90 
                 +irn+++++hvDhGKtTL d+Ll+++g+is+  + a++ r+lD++++E  rgiT+ks+aisl+          + +++ylinliD+PGHvdFs+ev+ +
  EPX71808.1  18 NIRNFTLLAHVDHGKTTLADSLLATNGIISS--KLAGTVRYLDFREDEITRGITMKSSAISLFfkvisqssekAVENDYLINLIDSPGHVDFSSEVSSA 114
                 89*****************************..888889*******************************985499*********************** PP

                 HHT-SEEEEEEETTTBSTHHHHHHHHHHHHTTTEEEEEEESCGSTHHHHHHHHHHHHHHHHHH...........................HHHHHHHHH CS
    GTP_EFTU  91 lrvlDgavlvvdaveGvepqteevlrlalkegvpiivfiNKmDrlkaelkeiveevkqklsrk...........................eeklekyge 162
                  r +Dga +++daveGv++qt +vlr+a+  +++++++iNKmDrl +elk ++ e++++l r                            +        
  EPX71808.1 115 SRLCDGAFILIDAVEGVCSQTITVLRQAWVDKIKMVLVINKMDRLVTELKLSPIEAHHHLLRLveqvnavigtfyrgelmnldemeeetsD-------- 205
                 *********************************************************9997778888888888888887775555543333........ PP

                 TTT......TTEEEEEEBTTTTBTHH CS
    GTP_EFTU 163 kge......kevpvvfgSalkgegvk 182
                   e      ++ +v+f+Sa +g+++ 
  EPX71808.1 206 --EgiyfspEQGNVIFASASDGWAFF 229
                 ..04555556778**********775 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.5
                 TBSTHHHHHHHHHHHHTTTE.EEEEEESCGST.......HHHHHHHHHHHHHHHHHH................HH CS
    GTP_EFTU 105 eGvepqteevlrlalkegvp.iivfiNKmDrl.......kaelkeiveevkqklsrk................ee 155
                 e v p   + + ++++ + + +   i Km          +++ + ++e+++ +l++                 e+
  EPX71808.1 373 ENVAPEIATAMSHCKADKEEpMLAYISKMVAFserdlpqQKRRQLTAEQMH-ELRQAklagsledsvgslsvnEN 446
                 556667777777777666655777777775555555555445555555555.33222455555555555555533 PP

>> EFG_C  Elongation factor G C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1       3.7   9.6e+03       3      12 ..     558     567 ..     557     572 .. 0.86
   2 !   50.4   0.0   6.5e-17   1.7e-13       5      85 ..     863     944 ..     859     946 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 3.7
                 EEEEEEEEEE CS
       EFG_C   3 lEPivkveie 12 
                 +EPiv+v +e
  EPX71808.1 558 MEPIVRVAVE 567
                 8*****9986 PP

  == domain 2  score: 50.4 bits;  conditional E-value: 6.5e-17
                 EEEEEEEEEECCCCCCHHHHHHHCT-EEEEEEEE..TTEEEEEEEEEGGG-TTHHHCHHHCTTTS-EEEEEEEEEEE--HHH CS
       EFG_C   5 PivkveievpeeyvgkvisdlssrrGeiedmeqd.asgrviieaeiPlaeligfateLrslTkGegsfsmefsgYeevpgdk 85 
                  ++++++++  e++g+v++ +++r+G+i d e + ++ +++++a iP+ e++gfa e+ + T+G ++ ++ f+g+e +++++
  EPX71808.1 863 AMYSCDVQATAEVLGRVYGVVAKRKGRIVDEEMKeGTPFFVVKAVIPVVESFGFAVEILKRTSGAAYPQLIFHGFEMLDENP 944
                 589******************************98899**************************************998875 PP

>> GTP_EFTU_D2  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.0   0.0   1.5e-13   3.7e-10       3      74 .]     467     543 ..     466     543 .. 0.95

  Alignments for each domain:
  == domain 1  score: 40.0 bits;  conditional E-value: 1.5e-13
                  EEEEEEEESEEETTEEEEEEC.TCTTSEE....EEEEEEEEEEETEEESEEETTSEEEEEEEESSCCSGSSTTCEEE CS
  GTP_EFTU_D2   3 valgrvysGtlkkGdevrilg.ndtskke....ivtrissletfhededeavaganaGvivaikgledaiivGdtlt 74 
                  v ++r+ysGt+ +G++v++ g ++++  +     +++i sl+ ++++e  + + ++aG+  ai gl  ++++++tl+
   EPX71808.1 467 VGFARIYSGTISVGQQVYVYGpKYDPANPdehvTKVTIESLYLMMGQELFPLDTVPAGNVFAIGGLAGTVLRTATLC 543
                  789****************9999987777**9999****************************************98 PP

>> EFG_II  Elongation Factor G, domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.6   0.0     1e-10   2.7e-07       3      67 ..     559     622 ..     558     631 .. 0.91

  Alignments for each domain:
  == domain 1  score: 30.6 bits;  conditional E-value: 1e-10
      EFG_II   3 ePvislaiepkskadedklskaLarlleEDptlrverdeeTketilsGmGelHleivverlkrey 67 
                 eP++ +a+ep+   +  kl + L+ l + Dp ++++ ++  +e ++ + Ge+Hle  ++ l++++
  EPX71808.1 559 EPIVRVAVEPSRPYEMSKLVAGLDMLNQSDPCVQISAEQ-NGEHVIMCAGEIHLERCLKDLRERF 622
                 79*********************************9865.599999***************9998 PP

>> DASH_Spc19  Spc19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.2   2.7e-06    0.0069      31     128 ..     361     461 ..     338     477 .. 0.77

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 2.7e-06
                 HHHHHHHHH-------.T..TTHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH......HHHHT-XXXXXXXXXXXX... CS
  DASH_Spc19  31 rlkkvLkttrvFeLip.e..sdleaakaslaeeiePqieellekaekeleklerreetLkaklelqegrlsnaesskkeeeeseeskeeeeeeenkeee 126
                 r  kvLktt +Fe +  e  + + + ka+ +e +   i++ +   e+ l +++rr+ t ++ +el++ +l  + +++  + + +e++ ee+ e++++ee
  EPX71808.1 361 RALKVLKTTPHFENVApEiaTAMSHCKADKEEPMLAYISKMVAFSERDLPQQKRRQLTAEQMHELRQAKLAGSLEDSVGSLSVNENELEENPENKDHEE 459
                 677**********8841322345556677777788899**********************************777776666666666665555555444 PP

                 .X CS
  DASH_Spc19 127 ks 128
                 ++
  EPX71808.1 460 EE 461
                 43 PP

>> EFG_IV  Elongation factor G, domain IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   6.1e-06     0.016      57     118 ..     783     854 ..     744     857 .. 0.72

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 6.1e-06
                 CHCCCCHHHHCCCCCCTTS-TTTS--EESEEEEEEEEE--T..........TTC-HHHHHHHHCHHHHHHHH CS
      EFG_IV  57 vpkeyieavekGfqealkeGplagepvtdvkvtLldgslhe..........vdsseaafkpaarralkeall 118
                 +p    e++ ++fq  +++Gpl+ epv+++ v +  +++ +              ++++++a+r a+k+++l
  EPX71808.1 783 IPFDLGEYIATAFQISTQQGPLCAEPVQGICVCIESIEIENgqenevltigNPQIPGQVISAVREAIKQGFL 854
                 555667899************************999988876666665544445567777777777777765 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.1   3.9e-06      0.01      10     114 .]      30     155 ..      23     155 .. 0.68

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 3.9e-06
                 SSHHHHHHHHHTSTEEE.SSSTTSSSSEEEEEEEETTEE.............................EEEEECGGCSSHHHHHHHHHHHHHHHHC.TS CS
    MMR_HSR1  10 vGKStLinaltgekaiv.sdkpgtTrdinegrvklkgke.............................ielvDtpGliegaseekglgkaflalee.ad 77 
                  GK+tL  +l+ ++ i+ s+ +gt r   +++ ++   +                             i+l+D pG ++       ++ ++ +  + +d
  EPX71808.1  30 HGKTTLADSLLATNGIIsSKLAGTVRYLDFREDEIT--RgitmkssaislffkvisqssekavendylINLIDSPGHVD-------FSSEVSSASRlCD 119
                 6**********9976661555666665544443311..122344556667777777777777777777********655.......777777777779* PP

                 EEEEEEETTTTCSHHHHHHHHHHHHHTTSEEEEEEES CS
    MMR_HSR1  78 lillvvdaseeklkpldeeleelleeakkplilvlnk 114
                  +++++da  e++  +  ++ +    +k++++lv+nk
  EPX71808.1 120 GAFILIDAV-EGVCSQTITVLRQAWVDKIKMVLVINK 155
                 *******88.546555444444433378899999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (998 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       744  (0.041497); expected 358.6 (0.02)
Passed bias filter:                      591  (0.0329634); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.74u 0.32s 00:00:01.06 Elapsed: 00:00:00.46
# Mc/sec: 6537.46
//
Query:       EPX71809.1  [L=544]
Description: DinB translesion DNA repair polymerase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.7e-44  149.3   0.5    3.5e-43  147.2   0.2    2.2  2  IMS          impB/mucB/samB family
      4e-18   66.2   0.6    1.1e-17   64.8   0.6    1.7  1  IMS_C        impB/mucB/samB family C-terminal domain
  ------ inclusion threshold ------
      0.017   15.4   0.1      0.048   14.0   0.1    1.8  1  IMS_HHH      IMS family HHH motif
      0.022   14.4   0.2      0.056   13.1   0.2    1.6  1  RNF220       E3 ubiquitin-protein ligase RNF220
       0.03   14.2   0.9        6.5    6.6   0.1    2.5  2  Protoglobin  Protoglobin
      0.065   13.7   0.0       0.27   11.7   0.0    2.1  2  PolyA_pol    Poly A polymerase head domain


Domain annotation for each model (and alignments):
>> IMS  impB/mucB/samB family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.2   0.2   1.2e-46   3.5e-43       1     150 []     135     283 ..     135     283 .. 0.96
   2 ?   -1.2   0.0      0.62   1.8e+03     123     142 ..     346     364 ..     332     366 .. 0.81

  Alignments for each domain:
  == domain 1  score: 147.2 bits;  conditional E-value: 1.2e-46
                 EEETTHHHHHHHHHT.T-TTS-EEEEET....TEEEEE-HHHHTTT--TTSBHHHHHTTHTT-EEEEEE-HHHHHHHHHHHHHHHHH-S..EEEEETTE CS
         IMS   1 iDmdaFyasverardpeLkgkPvvvaqgsekrgiviavsyeArayGvkrgmrikeakklcpdlivvkvdlekyrraskkileilkrfispkvekasiDE 99 
                 +D+daFyas+e++r+++Lk+ P++v++g     ++++++y Ar++Gv+++m+ + a+klcpdliv++ ++++y + sk+i ++l+++ ++++ +asiDE
  EPX71809.1 135 VDCDAFYASIEELRNENLKNVPMAVGKG-----VLCTANYMARKFGVRSAMPEFIARKLCPDLIVIPLNIPEYAKKSKEIQDVLAEY-DQNLCPASIDE 227
                 7*************************97.....******************************************************.98********* PP

                 EEEE-HHHHHHHH-S.....HHHHHHHHHHHHHHHH---EEEEEESSHHHHHHHHH CS
         IMS 100 ayldltgleelaese.....gaalakelrkaikeelgltvsiGiasnkllAKlase 150
                 +y++lt++++l+e +     +++++ ++r+++ e +g++vs+Gia+nkllAK+as+
  EPX71809.1 228 VYMNLTSYIHLHELSndednIQKVVTQIRNKVLEVTGVSVSCGIAANKLLAKIASN 283
                 *******88887777777889*********************************96 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.62
                 HHHHHHHH---EEEEEESSH CS
         IMS 123 rkaikeelgltvsiGiasnk 142
                 +++ +++l +++s Gi+s+ 
  EPX71809.1 346 KEKTFQNL-IQCSLGIGSTI 364
                 55566667.99******986 PP

>> IMS_C  impB/mucB/samB family C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.8   0.6   3.7e-21   1.1e-17       6     110 ..     371     474 ..     369     478 .. 0.88

  Alignments for each domain:
  == domain 1  score: 64.8 bits;  conditional E-value: 3.7e-21
       IMS_C   6 pepksissektfpepydesk....lkkelreLaeelarrLrdkglvartitlklrysdfh.asrsatLprptsdtreileaalkLlrrlidepglpirl 99 
                   +ksi+se tf++ +        l++ l+ L+++la +L +++l+a++i++k++++ f+ ++r+++L ++ ++ ++++ +alkLlr  ++   l++rl
  EPX71809.1 371 SNRKSIGSEITFSKAI---TsgglLESKLQSLCQSLADDLSKRDLIANSISIKIKTDTFQvHTRQKNLREYIYNDTDLFCEALKLLRVEYP---LRLRL 463
                 579**********944...3445799*******************************9999***********888888999999**66655...***** PP

       IMS_C 100 igvsasnlvek 110
                 +gv++s+l+ k
  EPX71809.1 464 LGVRLSKLTTK 474
                 ********944 PP

>> IMS_HHH  IMS family HHH motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.1   1.6e-05     0.048       4      32 .]     300     328 ..     297     328 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1.6e-05
     IMS_HHH   4 vkefLwplpitkipGiGgklgekLeklGi 32 
                 +++f+ +lp + i GiG++l+++L  l+i
  EPX71809.1 300 IEKFMFELPTRRINGIGRVLEQELLGLDI 328
                 579********************877765 PP

>> RNF220  E3 ubiquitin-protein ligase RNF220
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.2   1.9e-05     0.056     103     134 ..     484     518 ..     457     540 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.9e-05
      RNF220 103 krkpednvcpvCnkkvleel...tlhveaclrkse 134
                   k++   cpvC k++ ++l   ++h++ cl+ + 
  EPX71809.1 484 FSKQNSVPCPVCHKNLEDDLsvvNQHIDLCLNTET 518
                 45777788*********88633379******9877 PP

>> Protoglobin  Protoglobin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.1    0.0022       6.5      55      90 ..      71     115 ..      54     146 .. 0.85
   2 ?    5.7   0.1    0.0044        13      25      63 ..     213     251 ..     202     258 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0022
                  CH........HCHHHHHHHHHHHHHHHC.CCSSCCHHHHHHHHHH CS
  Protoglobin  55 et........ssqierlkdflksyllkl.fsgpfdsayveyldkv 90 
                  e          + ier+++  k+y +kl ++  f+++++e+ d++
   EPX71809.1  71 EAeqkrdlelRNRIERVQQEVKEYYRKLeCDKGFQREWAERTDEI 115
                  5555555666789***************77777********9998 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0044
                  HHHHHHHCHHHHHHHHHHHHCTSHHHHHHHCHHCHHHHH CS
  Protoglobin  25 lapliealipavvdafYekllsfpetarifetssqierl 63 
                  la++ ++l pa +d++Y +l s+ ++ +  +++++i+++
   EPX71809.1 213 LAEYDQNLCPASIDEVYMNLTSYIHLHELSNDEDNIQKV 251
                  566778899*************************99987 PP

>> PolyA_pol  Poly A polymerase head domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       2.6   7.9e+03      30      65 ..     227     264 ..     211     282 .. 0.69
   2 ?   11.7   0.0     9e-05      0.27      79     109 ..     395     425 ..     348     435 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 2.6
                 HHHHHHHHHHT-EEEE..ETTTTCCCCEECCEEEEECC CS
   PolyA_pol  30 elakllrkkvkealls..geefqtiavlekkqllevat 65 
                 e+  +l   ++ + ls  + + q +  ++++++lev+ 
  EPX71809.1 227 EVYMNLTSYIHLHELSndEDNIQKVVTQIRNKVLEVTG 264
                 55556666555555543455666777777777788875 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 9e-05
                 SHHH...HHHHHHCTSSBGGGS-EEECTTTC CS
   PolyA_pol  79 esekstesleeDlkrRDftiNalaynlnkgk 109
                 + ++  +sl +Dl +RD+  N++++++++++
  EPX71809.1 395 KLQSLCQSLADDLSKRDLIANSISIKIKTDT 425
                 44455579******************98776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (544 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       966  (0.0538792); expected 358.6 (0.02)
Passed bias filter:                      533  (0.0297284); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.43
# Mc/sec: 3831.41
//
Query:       EPX71810.1  [L=271]
Description: oligosaccharyltransferase delta subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.2e-17   61.2   1.5    9.2e-17   60.8   1.5    1.2  1  Ribophorin_II   Oligosaccharyltransferase subunit Ribophorin 


Domain annotation for each model (and alignments):
>> Ribophorin_II  Oligosaccharyltransferase subunit Ribophorin II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.8   1.5   5.1e-21   9.2e-17     410     616 ..      53     263 ..      34     271 .] 0.79

  Alignments for each domain:
  == domain 1  score: 60.8 bits;  conditional E-value: 5.1e-21
  Ribophorin_II 410 eadslqklrlkfalkdanegkeltphQafvrLt.hqktkqeviFvaeadskksYkfdldlgelaeef.dylSGtYeveLivGDavlenpilwnvad 503
                    e+ds+ +  l ++++ a +++   phQa + +   +k    +i+ ++ + +    ++l l+el +e+ +++ G  +  L++G    ++p    +++
     EPX71810.1  53 ELDSSLEDTLLVQFTCAIDDEVSVPHQAHILISdRKKPSSSIIYPVKVNTNGDAVLKLPLAELPSELiQSEHGLLT-TLMIGSFGDASPSSSSLGS 147
                    5555444444455555556777889999999984456678899999999999999999997776666155556655.6777655555566777777 PP

  Ribophorin_II 504 velkfpeeeekakkkkkkslykpkpeIkHlFRepekrPpkvvsntFtaLvllPllillvlwlklgvNlsnfpfs...lsailFhlglgaillLyvl 596
                    +  +  + +  + k++ +   +pkp I H+F +p k + k++s++F a v++  + ll++w+++    s +++s   l  ilF ++l+a+ +L++ 
     EPX71810.1 148 LVFDSGSLPVFQAKSSIEAETSPKPTILHTFAAPPKAANKFLSLVFSAAVAVASVALLIVWMQFAEKTSVYSVSsssLGHILFFVSLAAAEGLLFF 243
                    777777777766667788899*********************************************9999988878899***************** PP

  Ribophorin_II 597 FWlkLnmftTlkyLallgif 616
                    +W++L++f+ ++y +++ + 
     EPX71810.1 244 YWTSLTIFQLIRYSVFIFAA 263
                    *************7776554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (271 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       615  (0.034302); expected 358.6 (0.02)
Passed bias filter:                      271  (0.0151152); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1992.05
//
Query:       EPX71811.1  [L=152]
Description: ribosomal protein subunit S8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.7e-15   56.4   0.0    1.7e-14   53.9   0.0    1.8  1  Ribosomal_S8   Ribosomal protein S8
  ------ inclusion threshold ------
      0.013   14.9   0.0      0.018   14.4   0.0    1.1  1  RNA_pol_Rpc34  RNA polymerase Rpc34 subunit


Domain annotation for each model (and alignments):
>> Ribosomal_S8  Ribosomal protein S8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.9   0.0   1.9e-18   1.7e-14       7     126 ..       7     151 ..       3     151 .. 0.84

  Alignments for each domain:
  == domain 1  score: 53.9 bits;  conditional E-value: 1.9e-18
                   HHHHHHHHHTT-SEEEEE--HHHHHHHHHHHHCTSEEEEEEE.CCC...............CCCEEEEE-BSSS-SBSSSEEEE-SBTTC--EE-CC CS
  Ribosomal_S8   7 ltrirNaekakkeevevpasklkeeilkvLkeeGyikdfeve.eek...............kkkikielkynkkkksvikklkrvskpgrrvYakvk 87 
                   +++++N+ +a+k  + vp  +   e+   L ++G+i++++     +               ++ + ++lky + +k+v+k ++ vskp+r+vY++ +
    EPX71811.1   7 FSHLQNSFRAGKAMACVPNCRSVLELSAALYHQGFISSIQRGhI-QgpdlvptpttrsnvaERRLWLSLKYFE-GKPVMKYIRGVSKPSRKVYMTPS 101
                   7899************************************9633.3588888887765554444*********.8*********************9 PP

                   C---CGGG...........TSEEEEEETTEEEEHHHHHHCT--EEEEEEE CS
  Ribosomal_S8  88 elpkvlng...........lGiaivsTskGvmtdkeArkkkvGGevlayv 126
                   el ++ +g             +aiv T+kG+m  ++A ++++GG+vl+ v
    EPX71811.1 102 ELLNFSKGrtvsfvrglepAEVAIVETKKGIMGLEDAIREQLGGRVLCRV 151
                   99888776333222222223589*************************97 PP

>> RNA_pol_Rpc34  RNA polymerase Rpc34 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   2.1e-06     0.018     110     147 ..      61      98 ..      57     105 .. 0.92

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 2.1e-06
                    HTTGXXHHHHHHHHHHHHHTTXXEEEEXSSSSSXEEEE CS
  RNA_pol_Rpc34 110 sklnLhksvvkkcLksLeskkyiksvksvkaptkkiYl 147
                    ++ n ++  +  +Lk+ e+k   k ++ v+ p++k+Y+
     EPX71811.1  61 TRSNVAERRLWLSLKYFEGKPVMKYIRGVSKPSRKVYM 98 
                    688999999999*************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       291  (0.0162307); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.23s 00:00:00.59 Elapsed: 00:00:00.36
# Mc/sec: 1260.39
//
Query:       EPX71812.1  [L=229]
Description: TRAX protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.3e-48  164.4   0.8      5e-48  163.8   0.8    1.3  1  Translin      Translin family
  ------ inclusion threshold ------
      0.034   14.2   0.1      0.059   13.4   0.1    1.4  1  RNase_P_pop3  RNase P subunit Pop3
        0.1   13.5   0.2        0.1   13.5   0.2    1.9  2  DUF5339       Family of unknown function (DUF5339)


Domain annotation for each model (and alignments):
>> Translin  Translin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.8   0.8   8.4e-52     5e-48       1     204 [.      17     205 ..      17     206 .. 0.93

  Alignments for each domain:
  == domain 1  score: 163.8 bits;  conditional E-value: 8.4e-52
                 HHHHHHHHHHHHHHHHHHHHHHHHHTTGSSTTTHHHHHHH.H.HHHHHHHHHHTTSS..........GHHHHGGGTH.HHHHHHHHHHHHHHHHHSS-- CS
    Translin   1 drreriikasrditaaskkiifllhrvrsekteaqdkkakik.keakeklkeiakllasvaeelqgsnayrYqrqisgglqeliealsfahYletqtLi 98 
                 d+rerii++sr+it++sk++ifllh++ s+k    + +   + +++k++ ++i+k+l  +++el+ ++a rY+ ++s+g+qe++ea++f ++l++q+Li
  EPX71812.1  17 DKRERIIRISREITIQSKRMIFLLHQASSTK---FPLPL--EfDKTKQHKQNIQKQLGLLKQELDTPDAERYAASCSPGIQEFVEAYAFEYWLQHQSLI 110
                 89************************99766...34444..447999**************************************************** PP

                 -HHHHHHHTT.---SSSSSS---HHHHHHHHHHHHHHHHHHHHHHHCTT--S.HHHHHHHHHHHHHHHHHTS----HH....HHHHHTTHHHHHHHHHH CS
    Translin  99 tleevqkilealkeneedafhltpedYllGlfdLtgELmRfainsvalgdkeekplqilkflrelragfellnlknds.akdlrkKldvlkqsvkKvEd 196
                 + ++++ ++            l+  dY+lG++d+tgE+mRf i++ ++     + l+ ++flrel+ +++ l + n++ ++dl++Kl v+ +s++KvE 
  EPX71812.1 111 QPNDAKFQID-----------LQSFDYVLGVCDMTGEIMRFLITHGSKFAMV-DVLSHVQFLRELNLECTKLRNLNRRsQNDLKQKLGVMDNSISKVES 197
                 ***9987765...........8999**********************99988.9******************999998677****************** PP

                 HHHHHHHH CS
    Translin 197 vvYdlsvR 204
                 ++Y+  +R
  EPX71812.1 198 ICYSKILR 205
                 ***98887 PP

>> RNase_P_pop3  RNase P subunit Pop3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   9.8e-06     0.059      31     127 ..      92     192 ..      85     221 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 9.8e-06
  RNase_P_pop3  31 leLlqekvlkklvrlleskeneeseltvglneivelLe.csesddvvllvcnkD.tPsv..LlsqlpllvavanltvklvqlpksaqakldeklGls 123
                    e ++ +  + +++ +++ + ++ + +++l +   +L+ c   ++++ +++++  + ++   ls++  l + +    kl +l++ +q+ l++klG+ 
    EPX71812.1  92 QEFVEAYAFEYWLQHQSLIQPNDAKFQIDLQSFDYVLGvCDMTGEIMRFLITHGsKFAMvdVLSHVQFLRELNLECTKLRNLNRRSQNDLKQKLGVM 188
                   5677788888999999999999************************99998888556663469999999998877789*****************98 PP

  RNase_P_pop3 124 kagm 127
                   ++ +
    EPX71812.1 189 DNSI 192
                   7755 PP

>> DUF5339  Family of unknown function (DUF5339)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.5       2.5   1.5e+04      41      53 ..       6      18 ..       2      19 .. 0.73
   2 ?   13.5   0.2   1.7e-05       0.1      23      64 ..      55      96 ..      39      99 .. 0.91

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 2.5
     DUF5339 41 kqilalpkeqQea 53
                +q+  + +eqQ++
  EPX71812.1  6 QQFQRVLQEQQDK 18
                6777777888876 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 1.7e-05
     DUF5339 23 pgtktqadaikkqleqsKkqilalpkeqQeaaCkqgldalkq 64
                ++tk+ +++i+kql   K+++ + ++e  +a+C  g++++ +
  EPX71812.1 55 DKTKQHKQNIQKQLGLLKQELDTPDAERYAASCSPGIQEFVE 96
                689***********************************9965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       951  (0.0530426); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1750.48
//
Query:       EPX71813.1  [L=600]
Description: CBF1/Su(H)/LAG-1 family transcription factor Cbf11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.4e-18   67.9   2.4    5.2e-16   59.6   2.4    2.6  1  LAG1-DNAbind  LAG1, DNA binding
      2e-16   60.6   0.0    4.6e-16   59.4   0.0    1.7  1  BTD           Beta-trefoil DNA-binding domain


Domain annotation for each model (and alignments):
>> LAG1-DNAbind  LAG1, DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.6   2.4   5.8e-20   5.2e-16       1     149 [.     162     284 ..     162     286 .. 0.70

  Alignments for each domain:
  == domain 1  score: 59.6 bits;  conditional E-value: 5.8e-20
  LAG1-DNAbind   1 viilhakvAQKSYGtEkRflcPppivyLlGsgWkakeetkeskeaelaapkltislsgedaeeesqllesigvsgkvseqesqelklvldgk.caak 96 
                   +++ ha+v QKSYG+EkRflcPppi+++ G+   +        +   ++ ++ is+ +e    e q  +    +g+v    ++       ++ ++ +
    EPX71813.1 162 ITCRHASVIQKSYGSEKRFLCPPPILMIDGP--FQ--------SLLGISFRVEISIINE----EGQYSQT---VGEVY---NN-------QRcMVFR 231
                   6899***************************..11........1222333444444444....1111111...22322...22.......232579* PP

  LAG1-DNAbind  97 tlyis.dsdekrkevellvkllapngeeaalgsfeskpikviSkpskkrqslKn 149
                   +l++s  +  k+++ +l++ ++   +++ ++  f ++pi v+Skp kk +++K 
    EPX71813.1 232 SLHVSsLAAAKSRNLKLSIDFFSTITDQ-KVSHFVTSPIDVVSKPAKKGTKSKV 284
                   ****943556888888888888888655.9******************999986 PP

>> BTD  Beta-trefoil DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.4   0.0   5.1e-20   4.6e-16       2     115 ..     288     401 ..     287     449 .. 0.86

  Alignments for each domain:
  == domain 1  score: 59.4 bits;  conditional E-value: 5.1e-20
         BTD   2 cIasGtkvaLFnRlrsqtvstryLhvegaafaassrkWeaFtihlledekgene....efsvrdgfvkygsvvklvdsvtgvalpkliirKvdkqkvlL 96 
                 +++sG+ + L+nR+ sqtv+t+y + e+++f   s  W++  ihl++ +  +n     + s +   ++ygsvv+l d+++ + + +liir+v+k ++  
  EPX71813.1 288 TLRSGSIINLYNRINSQTVRTKYTTLENGNFCLRSDGWAPLRIHLISTSAESNVegmiNNSLEAVPIRYGSVVQLQDESSQIMSDPLIIRRVEKDEIAQ 386
                 579*****************************************88776655554655556667779*****************************988 PP

         BTD  97 dasasdepvsqLhkcafql 115
                 d       v+q+h++ ++ 
  EPX71813.1 387 DD----GYVNQMHRIVLES 401
                 76....7899999887654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (600 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       531  (0.0296168); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.28s 00:00:00.88 Elapsed: 00:00:00.47
# Mc/sec: 3806.20
//
Query:       EPX71814.1  [L=671]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-11   45.4   2.7    1.1e-11   45.4   2.7    4.8  4  DUF3835   Domain of unknown function (DUF3835)


Domain annotation for each model (and alignments):
>> DUF3835  Domain of unknown function (DUF3835)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   1.4      0.28     5e+03      53      74 ..     207     228 ..     161     232 .. 0.68
   2 !    6.8   7.7    0.0007        13      33      78 .]     269     314 ..     238     314 .. 0.68
   3 ?   -0.0   0.8     0.093   1.7e+03      33      63 ..     519     554 ..     491     578 .. 0.64
   4 !   45.4   2.7   6.4e-16   1.1e-11       1      78 []     588     667 ..     588     667 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.28
     DUF3835  53 eeeeeiepidedgnpkkvSRFK 74 
                 ++++e +p  e +++k+ S FK
  EPX71814.1 207 SKQNEKKPEYERDEKKNKSLFK 228
                 4555666666666777778887 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0007
     DUF3835  33 eeYhrlRnkliqrqggfvkseeeeeiepidedgnpkkvSRFKAaRl 78 
                 +  +  ++ + ++  +  +++++++ ep+ + + +kk+S+FK a+l
  EPX71814.1 269 TDNNAVKETVTEKPVQKSNNQKQSDTEPLTNSKPQKKMSKFKEAKL 314
                 45566666666664444445899999******999*******9986 PP

  == domain 3  score: -0.0 bits;  conditional E-value: 0.093
     DUF3835  33 eeYhrlRnkliqr..qggfvks...eeeeeiepide 63 
                 +++++ R k+ ++  + g++ s   ++e+++ p +e
  EPX71814.1 519 SAFRKNRSKMKSQekNKGVESSnnvHKEKKLPPFEE 554
                 567888888866643334433366677777777777 PP

  == domain 4  score: 45.4 bits;  conditional E-value: 6.4e-16
     DUF3835   1 ladevvErdi..keaaappdpde.ldeellqrevaeeYhrlRnkliqrqggfvkseeeeeiepidedgnp.kkvSRFKAaRl 78 
                 ++++v+Er++  + ++a++d ++  +  ++ re++ +Y++lR+k+++ + + v  +eee ++p+de+gn+  k+S+F+AaRl
  EPX71814.1 588 MKSNVFERQPsrSVEQAKEDFEDhQEFVKDGREISHRYYELRRKILNPELKDV--KEEEGVVPVDENGNErPKLSKFMAARL 667
                 6789******744444444433336667889**************99866555..69************989*********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (671 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2612  (0.145686); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        71  (0.00396006); expected 17.9 (0.001)
Passed Fwd filter:                        21  (0.00117129); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.99u 0.31s 00:00:01.30 Elapsed: 00:00:00.48
# Mc/sec: 4189.79
//
Query:       EPX71815.1  [L=610]
Description: aspartate-tRNA ligase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   9.8e-102  340.2   0.0   1.2e-101  339.9   0.0    1.1  1  tRNA-synt_2      tRNA synthetases class II (D, K and N)
    2.4e-05   24.2   0.1    0.00051   20.0   0.1    2.6  2  tRNA_anti-codon  OB-fold nucleic acid binding domain
  ------ inclusion threshold ------
      0.075   12.7   0.0       0.13   11.9   0.0    1.3  1  DUF4131          Domain of unknown function (DUF4131)
      0.077   13.0   0.1       0.31   11.0   0.0    2.0  3  tRNA-synt_2b     tRNA synthetase class II core domain (G, H, 


Domain annotation for each model (and alignments):
>> tRNA-synt_2  tRNA synthetases class II (D, K and N)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  339.9   0.0  2.7e-105  1.2e-101       4     313 ..     146     580 ..     143     581 .. 0.98

  Alignments for each domain:
  == domain 1  score: 339.9 bits;  conditional E-value: 2.7e-105
                  HHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHTT-EE----SEESS--SSSS--EEEEETTT.TEEE-E-S-SHHHHHHHHHCTHSEEEEEEEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2   4 lrlknryldlrtekvskvlrlrstvtkavrkyleengfieietPiLsksdteegarlFkvksrekekeffaLtqspqlylellivagidrvfqiaraF 101
                  ++l++r+++lr+++++k lr+rs+++++vr+++ +n+f+e+etP+L+ks t+egar+F+v+sr+++++f+aL+qspq+y+++l+++gi++++q+ar+F
   EPX71815.1 146 VQLTHRHIQLRNPRYNKYLRMRSHIAHIVRDFFYKNDFVEVETPLLFKS-TPEGAREFLVPSRQEPGKFYALPQSPQQYKQILMASGIGNYYQLARCF 242
                  7899*********************************************.************************************************ PP

                  --S--BTTB-S-CEEEEEEEEET-SCHH.HHHHHHHHHHHHHHHHHHCSCCCCCHTTTTTSEE-SSS-EEEEHHHHHHHHHTS-SS--HHHHHHHHH. CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx. RF
  tRNA-synt_2 102 RaEdsrtdrhlaEFtqieaemsfieeed.imqvleelikslvkevlessakdiefvirrnskdlkkpfkrltykeaieklneigkdldkaderalvk. 197
                  R+Ed+r dr++ EFtqi++emsfi+  + im v+e+l++++++++ ++              ++++pf+r++y+eaie      +++dk+d+r+ +k 
   EPX71815.1 243 RDEDLRYDRQP-EFTQIDLEMSFINSPQqIMTVIENLFSQILENLGKN--------------SVASPFPRMSYAEAIES-----YGSDKPDLRYGLKl 320
                  ***********.**************999****************443..............5999*************.....************** PP

                  .................................................................................................. CS
                  .................................................................................................. RF
  tRNA-synt_2 198 .................................................................................................. 197
                                                                                                                    
   EPX71815.1 321 qdltpflpnsesctevlvlrdvkktisnaearslceqvgqdvsfvtirdnsqlpewnkkipqlkhlplnlerineklglspgltlfvanrpkymtsgt 418
                  ************************************************************************************************** PP

                  ........................HS--SEEEEEEEB.............GGGSTTCBBBSTTS........TTBBSEEEEEETTEEEEEEEEB--SH CS
                  ........................xxxxxxxxxxxxx.............xxxxxxxxxxxxxx........xxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2 198 ........................keknepvfvtdfP.............aelkpFyarkeedd........kkltesyDllingvElvgGslRiedp 250
                                           +  ++++++dfP             ++++pF+a++ ed         + ++ +yDl++ngvEl+gGs+Ri+dp
   EPX71815.1 419 tplgrlrpllhnflvkqhqlphlnDDLLNFTWIVDFPlfspaennseslmSTHHPFTAPHPEDLhllsssplNVRALHYDLVVNGVELGGGSIRIHDP 516
                  ***********************99999********************************************************************** PP

                  HHHHHHHHHCCHH.SSSGGGGHHHHHHHHCT--SEEEEEEEHHHHHHHHCT-SSGGGCSSS-XX CS
                  xxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2 251 eeleeklkskgld.eeaeekfswylealeyGapphgGlglGldRlvmlllgsesIrdviaFPkl 313
                  ++++ +l++  +  +++  +f++++ +l+ G+pphgG++lG+dRl++ll++s+ Ir+viaFPk+
   EPX71815.1 517 KLQSYVLERILKLqQKQLCTFDHLISVLQSGCPPHGGIALGFDRLIALLVKSNGIREVIAFPKT 580
                  ********99888688999*******************************************97 PP

>> tRNA_anti-codon  OB-fold nucleic acid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.1   1.1e-07   0.00051       2      76 .]      19     127 ..      13     127 .. 0.75
   2 ?    0.9   0.0       0.1   4.5e+02      12      27 ..     356     371 ..     343     373 .. 0.80

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 1.1e-07
                      EEEEEEEEEEEEEE.TTEEEEEEEETT.EEEEEEEET...........................HHHHHHHTTS-TTSEEEEEEEEEECTTS.. CS
  tRNA_anti-codon   2 tvaGrvtsisdrsg.gkvifidlrDgt.griqvvlfr...........................eeatklaenlkeGdvvrvtGrvkrrpgg.. 64 
                      +v G+++ +  r++ +++ f +lrD     +q++                              +  +   + ++ ++vv +tG+++ rp++  
       EPX71815.1  19 SVSGWLVHTN-RHIsKSIKFNQLRDVQgKYLQLFSQEplqvpkkllaetrwessncadatatssSLNDHASQVIPSESVVNITGKLQYRPERdr 111
                      5666666665.5551555555599999557888888888888899999999999998888777555555556688**************66667 PP

                      ....SEEEEEEEEEEE CS
  tRNA_anti-codon  65 ....elelkveeiell 76 
                          e+elkve++e+l
       EPX71815.1 112 rpgnEFELKVENLEVL 127
                      7777*********986 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.1
                      EEEETTEEEEEEEETT CS
  tRNA_anti-codon  12 drsggkvifidlrDgt 27 
                      ++ g+ v+f+++rD++
       EPX71815.1 356 EQVGQDVSFVTIRDNS 371
                      678999********87 PP

>> DUF4131  Domain of unknown function (DUF4131)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0     3e-05      0.13      57     131 ..      85     169 ..      76     174 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 3e-05
     DUF4131  57 ndlsqllesgqeviveGvvaslpeltgsgt.rfvleverv.........lsagktkpvsgrvlvtvpkspaeglrpGdrlrltgr 131
                 ++ sq+++s+  v ++G+++ +pe++++    f+l+ve++         + + + +++s  v++t +  +  + r++ +lr +  
  EPX71815.1  85 DHASQVIPSESVVNITGKLQYRPERDRRPGnEFELKVENLevlnfsrhiPFNPNDENTSLPVQLTHRHIQLRNPRYNKYLRMRSH 169
                 56788899788888**********9977666****************99999999999999*****9999999999999998766 PP

>> tRNA-synt_2b  tRNA synthetase class II core domain (G, H, P, S and T)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0     7e-05      0.31      38      96 ..     234     288 ..     233     347 .. 0.83
   2 ?   -3.6   0.1         2   9.1e+03      30      43 ..     380     394 ..     376     396 .. 0.73
   3 ?   -1.7   0.0      0.54   2.4e+03     162     179 .]     552     569 ..     545     569 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 7e-05
                   EEEEEEEEEBTTTSTBCTTTB-SEEEEEEEEEEESGGGHHHHHHHHHHHHHHHHHHTT. CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2b  38 klyqiqtkyRdEksdsrGLlRvreFhqkdgyvfhaeaslddslrdlikaisriferlgl 96 
                   ++yq+ +++RdE    +   R+ eF+q d ++   ++  ++++  ++++ s+i+e+lg 
    EPX71815.1 234 NYYQLARCFRDEDL-RYD--RQPEFTQIDLEMSFINS-PQQIMTVIENLFSQILENLGK 288
                   79**********97.568..999******98755543.456666667778888888884 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 2
                   EEB.GGSSEEEEEEE CS
                   xxx.xxxxxxxxxxx RF
  tRNA-synt_2b  30 lrs.krLPlklyqiq 43 
                   + + k+LPl+l  i 
    EPX71815.1 380 IPQlKHLPLNLERIN 394
                   556699****98876 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 0.54
                   EEEEEEHHHHHHHHHHHH CS
                   xxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2b 162 icaaigveRllsaileqn 179
                   ++ a+g  Rl+++++ +n
    EPX71815.1 552 GGIALGFDRLIALLVKSN 569
                   67899********99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (610 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       438  (0.0244297); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.61u 0.25s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 4069.97
//
Query:       EPX71816.1  [L=374]
Description: alpha-1,2-galactosyltransferase Gma12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.2e-77  258.0   0.8    1.2e-76  257.5   0.8    1.2  1  Glyco_transf_34  galactosyl transferase GMA12/MNN10 family


Domain annotation for each model (and alignments):
>> Glyco_transf_34  galactosyl transferase GMA12/MNN10 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  257.5   0.8   6.9e-81   1.2e-76       2     238 ..     101     339 ..     100     340 .. 0.96

  Alignments for each domain:
  == domain 1  score: 257.5 bits;  conditional E-value: 6.9e-81
  Glyco_transf_34   2 epeivlllvsnekkcenssgdhelllkvikNrvdYaekhgyeifykkvsalla..eemnsvWaklpairaamkkyPeaewiWwlDqdAlimnmd 93 
                      +++iv+l++sn++k++     +++ +++ikNr++Yae+hg+ +++ ++s++ a  +++   W k+p+++++m kyP+aewiWwlD+dAlimn+d
       EPX71816.1 101 NSKIVILMGSNFHKQD--GPLNKYAKSIIKNRREYAERHGFIFEFLDASEYAAkvTGHLYPWVKVPMLKDTMDKYPQAEWIWWLDHDALIMNKD 192
                      89************97..555569***************************9988889999********************************* PP

  Glyco_transf_34  94 lsleehvlkperLeelllkntpv....vplrryketnlvedgedvlviisqdwnglnagsflirnsewsklllDlwadpllrekkkavtesdeq 183
                       ++ e +l++e+L++ll++ +++     ++ + + t+++++++dv++i sqd+ng+nags+++rnse++++++D+w++pl+ ++ +     +eq
       EPX71816.1 193 ANIVETLLDHEKLNSLLTRGAEYksgaGIETDGFYTPQQQEAQDVHFIMSQDFNGINAGSLFVRNSEVGRWIVDIWFEPLYLDHIQG---YAEQ 283
                      ***********************999999999999**************************************************99...**** PP

  Glyco_transf_34 184 saleyllekhpevlskvglveqkvinsydeg.ekelgykegdlvvhfagCkvankc 238
                      +a+++++++hp v+++vglv+ ++in+yd   +++++++e d+++hfagC+ +++c
       EPX71816.1 284 QAISHMIYYHPIVHKHVGLVPLRTINAYDFYdDPTWSWQENDICIHFAGCNFFHNC 339
                      ****************************9851578*****************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (374 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       785  (0.0437838); expected 358.6 (0.02)
Passed bias filter:                      525  (0.0292822); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 2766.40
//
Query:       EPX71817.1  [L=431]
Description: phenylalanyl-tRNA synthetase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.3e-48  163.6   0.2    8.4e-27   94.2   0.0    2.2  2  tRNA-synt_2d  tRNA synthetases class II core domain (F)
    1.3e-24   86.4   0.2    3.9e-24   84.9   0.1    1.9  2  FDX-ACB       Ferredoxin-fold anticodon binding domain


Domain annotation for each model (and alignments):
>> tRNA-synt_2d  tRNA synthetases class II core domain (F)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.4   0.1   1.5e-22   1.3e-18       9     131 ..      45     165 ..      38     183 .. 0.84
   2 !   94.2   0.0   9.4e-31   8.4e-27     155     245 .]     243     329 ..     211     329 .. 0.88

  Alignments for each domain:
  == domain 1  score: 67.4 bits;  conditional E-value: 1.5e-22
                   SCTSHSB-SHHHHHHHHHHHHHHCTTCEESS.TTSEEEHHHHTSTTTSTTTSHHHCHTTSEBTCTSSS-ECESEEE-SSTHHHHHHHH...TTS-SS CS
  tRNA-synt_2d   9 krieagklhpltkvleeikeiflelgfeeve.gpevesefynfdaLnvpqdhpaRdmqdtFylkkpekaveekllLRthttavqirtl...ekkkpp 101
                   +r+   + hpl +++e +++ f     + ve ++ v s + nfd L +p+ h  R+ +dt+y+       ++++ LRtht+a q+ +    +++k+ 
    EPX71817.1  45 RRLFLQSGHPLCSLRELLQQQFKGKPINFVEkDSPVVSTITNFDSLGIPKTHVSRSKSDTYYV-------NKDTCLRTHTSAHQLEEFqklAESKMS 134
                   56666778999999********986666665566666**************************.......56899*********9887666788888 PP

                   EEEEEE.EEEEBSST-SSSB-SEEEEEEEEE CS
  tRNA-synt_2d 102 ikiisi.grvfRrdavDathlaeFhqveglv 131
                    k + i   v+Rrd+vDa+h + Fhq+eg +
    EPX71817.1 135 KKGFLItADVYRRDEVDASHYPIFHQMEGAY 165
                   887765268*******************975 PP

  == domain 2  score: 94.2 bits;  conditional E-value: 9.4e-31
                   STEEEEEEECEETTEEEEEEEEEEECCSSSSEEEEEEEEEE-HHHHHHTT-.TTSEEEEEEEEHHHHHHHHHT-SSGHHHHTT.HHHHGGG CS
  tRNA-synt_2d 155 aevkvrfrpsyfpftePsaevdvylvekkkkwlEllgaGmvrpevleavgideevsgfafGlGveRlamlkygieDiRelvendlrflrqf 245
                    +v+ r+  + fpft+Ps+++++ +   k+ wlE+lg+G+vr+++l+ +gi ++  g afG+G+eRlam+ ygi+DiR ++++d rf++qf
    EPX71817.1 243 SQVRYRWTYDSFPFTQPSFQLEILW---KGAWLEILGCGVVRENILTRAGI-QNHVGWAFGIGLERLAMILYGIPDIRLFWTTDDRFCKQF 329
                   33566666777**************...9**********************.9999*******************************9997 PP

>> FDX-ACB  Ferredoxin-fold anticodon binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.1   9.4e+03      41      51 ..     142     152 ..     112     156 .. 0.64
   2 !   84.9   0.1   4.3e-28   3.9e-24       1      94 []     341     431 .]     341     431 .] 0.99

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.1
                 EEEEESTTS-S CS
     FDX-ACB  41 fDvYrgkklae 51 
                  DvYr +++++
  EPX71817.1 142 ADVYRRDEVDA 152
                 48888887765 PP

  == domain 2  score: 84.9 bits;  conditional E-value: 4.3e-28
                 -SS--EEEEEEEEEESSS-HHHHHHHHHHHH-TTEEEEEEEEEEESTTS-SSEEEEEEEEEE--SSS---HHHHHHHHHHHHHHHHTT.T-BES CS
     FDX-ACB   1 SkfPaverDlalvvdekveaaelleavreaagellesvqlfDvYrgkklaegkkSlalrltlqskertLtdeevnaaiekvvealekklgaelR 94 
                 Sk+P +++D+++++de+++a+++ e++r+  ++l+esv+l+D Y+ k    gk Sl++r++++s+e++L++e+v+ +++++++a+++ l+++lR
  EPX71817.1 341 SKYPLCYKDISFWIDESFTANDFFEVIRDVCKDLVESVDLIDQYTTKA---GKTSLCYRVNYRSMEKSLKNEDVDLLQDNLRKAIASSLNIQLR 431
                 9********************************************988...*****************************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (431 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       491  (0.0273858); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 2989.81
//
Query:       EPX71818.1  [L=289]
Description: hypothetical protein SOCG_03754 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.076   13.1   0.1       0.16   12.1   0.1    1.5  1  ssDNA_DBD  Non-canonical single-stranded DNA-binding domain


Domain annotation for each model (and alignments):
>> ssDNA_DBD  Non-canonical single-stranded DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   8.7e-06      0.16       8      71 ..     155     215 ..     151     234 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 8.7e-06
                 HHHHHHHHHHHHHT-GGGGGSTHHHHHHHHHHHHHH-HHHHHHHGGGCHHHHH-------HHCC CS
   ssDNA_DBD   8 kaqqfveelaselqlpelsqtkLaeNLlLLllKynESpkLseqfqleYqelleerkqeyallqe 71 
                 +a qf+e l+++   +   +t+  +N +L+ lK ++S  Ls+   l +qe+l++++++ +++ +
  EPX71818.1 155 NARQFIEDLKTRN-FS--FKTSTLTNGFLIGLKMKDSNRLSHVGHLVFQEVLNKEENDVETVFQ 215
                 5677777776653.33..467778899*************************999988776554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       372  (0.0207485); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 1990.62
//
Query:       EPX71819.1  [L=706]
Description: meiotic chromosome segregation protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-22   79.2   1.5    5.3e-22   77.9   1.5    1.7  1  DUF2439   Protein of unknown function (DUF2439)


Domain annotation for each model (and alignments):
>> DUF2439  Protein of unknown function (DUF2439)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.9   1.5     3e-26   5.3e-22       1      81 []       7      85 ..       7      85 .. 0.97

  Alignments for each domain:
  == domain 1  score: 77.9 bits;  conditional E-value: 3e-26
     DUF2439  1 vkeyevlYTsqvtkKsKkWhDGflklhsfnkrvvLydeesklvessflknekeeleegeelelekylvqveeliseeerdi 81
                v +y+vl+Ts++ kK+K+W+DG++++h+fn+r +Lyd+e++++++sf+   +++++ +++lel+++l+ +e+l+++++++i
  EPX71819.1  7 VLHYQVLWTSDKVKKAKVWKDGTMRFHTFNNRGILYDSENRVIDESFVF--NQKVQVDAHLELNRTLIYIEDLQATTSKEI 85
                678**********************************************..89**********************999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (706 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       438  (0.0244297); expected 358.6 (0.02)
Passed bias filter:                      200  (0.0111551); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.24s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 4827.38
//
Query:       EPX71820.1  [L=703]
Description: glutamine-dependent NAD synthetase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      1e-40  139.8   0.0    1.4e-40  139.3   0.0    1.2  1  CN_hydrolase  Carbon-nitrogen hydrolase
    5.2e-23   81.4   0.0    1.2e-22   80.2   0.0    1.5  1  NAD_synthase  NAD synthase


Domain annotation for each model (and alignments):
>> CN_hydrolase  Carbon-nitrogen hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.3   0.0   1.5e-44   1.4e-40       1     257 [.       6     279 ..       6     283 .. 0.94

  Alignments for each domain:
  == domain 1  score: 139.3 bits;  conditional E-value: 1.5e-44
                   EEEEEEBB-STTHHHHHHHHHHHHHHHHHHTTESEEEEETTTTTBSSSHHHHHHHHB....HSSSHHHHHHHHHHHHHTEEEEEE..EEEEEC.CTT CS
  CN_hydrolase   1 rvAvvQlpqkaadleanlqklleliaeAarkgadLivlPElfitgykeeahfleaAe....aglgetlallaalarkngiavvig..lierel.tng 90 
                   ++A++Ql+q+a d+e+n +++ e i++A++++a+L + PEl itgy +e+hfle ++    +   e+++++ + + +++i++ ig  ++++ + +n+
    EPX71820.1   6 TIASCQLNQWALDFEGNRDRIIESIRQAKQQNARLRLGPELEITGYGCEDHFLETDTythsW---EMFCWIIKHPDCQDILLDIGmpVMYKSVrHNC 99 
                   68********************************************************5555...********************555555559*** PP

                   EEEEEEEEEEEETTSEE...EEEEE-SS--EECTTSCECCGHHTSCS.............-SSS-EEEETTEEEEEEEGGGGGSHHHHHH.HHHTT- CS
  CN_hydrolase  91 klqayntavlldldgkl...vgkyrKlhLfpgeprpptaverelfep.............gdgipvfdtpvgkiGaaiCyeigfpellra.lalkga 170
                   ++ a+n+ +ll + + +    g+ r++++f + + +p++ve+ +++              gd  +v++++ + +G++ C+e + p + ++ +al+g+
    EPX71820.1 100 RMVALNGKILLIRPKLWlcdDGNFRESRWF-TPWLRPRVVESFYLPTsvseslgqkqvpiGD--AVLQCKDTVVGIETCEELFTPDSPHVdMALDGV 193
                   ******************************.89*****************************..********************************* PP

                   SEEEEBH.GCCCTCHHHHHHHHHHHHHHHHHHTSEEEEEEBEEEHCETTEEEE--EEEE-TTS-EEEECCSSSTE...EEEEEEEHHHHH CS
  CN_hydrolase 171 eilvnlserapvpksmgppqwellgraralengcfviaanqvggyeqlilwpvghSaiidpdGrilaglgeeeeg...vliaeidladvr 257
                   e+ +n +++++++ ++      l+ ++ + ++g++ +++nq g+  ++++ ++ ++a+i  +G++la+ +++  +   v+ a+ + ++vr
    EPX71820.1 194 EVFLN-ASGSHHELRKLSTRYGLIKNSTQKCGGIY-LYSNQRGC--DGGRLYYDGCAMILANGELLAQGSQFCLKdveVISATANVDKVR 279
                   *****.7799*************************.********..***********************998776666666666666665 PP

>> NAD_synthase  NAD synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.2   0.0   1.3e-26   1.2e-22       8     198 ..     341     596 ..     338     605 .. 0.89

  Alignments for each domain:
  == domain 1  score: 80.2 bits;  conditional E-value: 1.3e-26
                   HHHHHHHHCTTSEEEEEE-SSHHHHHHHHHHHHHH................................TCGEEEEEE--SSSTTHHHHHHHHHHHHHH CS
  NAD_synthase   8 flkeyvkkagakgvvlGlSGGvDSslvaalavkal................................gkenvlalllPssvsseedvedalalaenl 72 
                   +l +y++++ ++g+ l lSGG+DS+ +a++  ++                                  ++ + + ++ +++ss+e  + a++l   +
    EPX71820.1 341 WLWDYLRRSRSSGFFLPLSGGLDSAATAVIVHSMCrivtnaikdnvladvrrivgdenytstcprelASHIFCTSYMGTENSSKETRNRAKELSSLI 437
                   7889************************99988888899**************************99999999************************ PP

                   TSEEEE---HHHHHHHHH.......HHHHHH...........-HHHHHHHHHHHHHHHHHHHHH........HHTEEEB---BHHHHTTT-S-TTTT CS
  NAD_synthase  73 gievktidikpivrafeq.......elkeak...........edlakgNlkaRiRmailyaian........klnllvlgTgnksElvvGyfTkyGD 143
                   g     ++i+ ++ra+ +       +    +           e+la +N++aR Rm + y +a         + +llvlg +n  E + Gy Tky  
    EPX71820.1 438 GSYHVDMNIDTMTRAVVSlfgmvtgK----TpqfrsqggsnaENLALQNIQARSRMLLSYLFASllpwvrgySGSLLVLGSSNVDECLRGYLTKYDC 530
                   **************999966554440....1455566699999*******************97333333334579********************* PP

                   T--SBETTTTS-HHHHHHHHHHTT......--HHHHCS--B--S.....STT-BHHHHHSS-HHHH CS
  NAD_synthase 144 gaadlapiaellKtevkeLakeln......vPervlkkpPsAdL.....kpgqtDeeeLgikYdel 198
                    +ad++pi+++ Kt+ k  ++         + ++ l+  P+A+L        q+De+++g++Y el
    EPX71820.1 531 SSADINPIGGISKTDLKSFLQFTKgefdlpILQNFLDATPTAELepatnNYAQSDEADMGMTYPEL 596
                   ******************999877788877889***********88777778***********988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (703 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       332  (0.0185175); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.30s 00:00:00.92 Elapsed: 00:00:00.48
# Mc/sec: 4374.21
//
Query:       EPX71821.1  [L=932]
Description: AAA family ATPase Pex1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.8e-51  173.4   0.0    4.1e-39  134.0   0.0    2.4  2  AAA              ATPase family associated with various cellul
      3e-17   62.8   0.0    8.4e-17   61.4   0.0    1.8  1  PEX-1N           Peroxisome biogenesis factor 1, N-terminal
    4.1e-10   40.3   4.5      0.016   15.6   0.1    4.1  4  AAA_16           AAA ATPase domain
    2.3e-07   30.9   0.7      0.052   13.5   0.2    4.3  3  NACHT            NACHT domain
    1.2e-05   25.4   0.0      0.049   13.7   0.0    2.7  2  AAA_14           AAA domain
    1.6e-05   25.2   0.9       0.75   10.1   0.1    4.2  4  AAA_22           AAA domain
    1.7e-05   24.8   0.0       0.14   12.1   0.0    3.4  2  AAA_5            AAA domain (dynein-related subfamily)
    3.6e-05   24.3   0.1       0.15   12.6   0.0    3.0  2  AAA_18           AAA domain
    5.2e-05   22.8   0.7       0.22   11.0   0.4    3.3  2  AAA_7            P-loop containing dynein motor region
    7.2e-05   22.5   0.0    0.00047   19.9   0.0    2.3  2  AAA_lid_3        AAA+ lid domain
    7.4e-05   22.5   0.0        0.4   10.4   0.0    2.4  2  IstB_IS21        IstB-like ATP binding protein
    0.00012   22.3   0.0       0.23   11.6   0.0    2.5  2  AAA_33           AAA domain
    0.00016   22.2   0.0       0.55   10.7   0.0    2.8  2  ABC_tran         ABC transporter
     0.0011   18.1   0.0       0.19   10.8   0.0    2.4  2  DUF815           Protein of unknown function (DUF815)
     0.0012   18.6   0.2       0.47   10.1   0.0    2.5  2  AAA_24           AAA domain
     0.0014   18.5   0.1       0.53   10.1   0.0    2.5  2  Bac_DnaA         Bacterial dnaA  protein
     0.0016   18.2   0.0        2.9    7.6   0.0    2.6  3  Sigma54_activat  Sigma-54 interaction domain
     0.0017   18.4   0.0       0.84    9.7   0.0    2.4  2  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
     0.0023   18.3   0.0       0.69   10.3   0.0    3.0  2  RNA_helicase     RNA helicase
     0.0049   16.5   0.6        6.2    6.3   0.0    4.2  5  AAA_25           AAA domain
     0.0081   16.3   0.0       0.03   14.5   0.0    1.9  1  AAA_2            AAA domain (Cdc48 subfamily)
  ------ inclusion threshold ------
      0.011   15.7   0.3        8.7    6.2   0.0    3.0  3  ATPase_2         ATPase domain predominantly from Archaea
      0.011   15.5   0.0      0.057   13.2   0.0    2.1  2  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
      0.017   15.0   0.3         17    5.2   0.1    3.5  3  dNK              Deoxynucleoside kinase
      0.018   14.2   0.0          2    7.6   0.0    2.5  2  NB-ARC           NB-ARC domain
      0.021   14.0   0.0        3.9    6.6   0.0    2.3  2  TIP49            TIP49 P-loop domain
      0.023   14.5   0.0        2.1    8.0   0.0    2.5  2  Viral_helicase1  Viral (Superfamily 1) RNA helicase
      0.023   14.1   0.2       0.32   10.4   0.1    2.3  2  SRPRB            Signal recognition particle receptor beta su
      0.032   13.6   0.0        9.4    5.6   0.0    2.6  3  Mg_chelatase     Magnesium chelatase, subunit ChlI
      0.041   14.1   0.1        6.8    6.9   0.1    2.7  2  AAA_28           AAA domain
      0.049   12.9   0.0        3.4    6.9   0.0    2.3  2  Zeta_toxin       Zeta toxin
      0.052   13.3   0.2         12    5.6   0.0    2.5  2  PduV-EutP        Ethanolamine utilisation - propanediol utili
      0.081   12.7   0.0       0.15   11.8   0.0    1.4  1  Olfactory_mark   Olfactory marker protein
      0.081   12.1   0.1         30    3.6   0.0    3.1  3  PIF1             PIF1-like helicase
      0.099   12.4   0.1        7.2    6.4   0.0    2.4  2  AAA_29           P-loop containing region of AAA domain
       0.11   12.9   0.0       0.55   10.6   0.0    2.3  1  PEX-2N           Peroxisome biogenesis factor 1, N-terminal


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.1   0.0   7.7e-12   3.8e-09       1     125 [.     383     510 ..     383     515 .. 0.73
   2 !  134.0   0.0   8.2e-42   4.1e-39       1     130 [.     649     777 ..     649     779 .. 0.96

  Alignments for each domain:
  == domain 1  score: 37.1 bits;  conditional E-value: 7.7e-12
                 EEEESSTTSSHHHHHHHHHHHH....THEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTS...TSEEEEEETGGGHHHHH..TTCCCHHHHHHHHHHH CS
         AAA   1 vllyGppGtGKTllakavakel....gvefleisgsellskyvgesekkirelfkeakeka...kpsilfiDEidalaksr..sgseseeeervvnqLl 90 
                 vl+ G +G GKT+l +++ +++     ++   is++el       s +k++++++++  k    +psi+++D++d++ +s+  +++ s ++er ++ ++
  EPX71821.1 383 VLVNGIKGSGKTSLLRSLNQKCctstVFHTEYISCTELN----LSSFSKFSGFWDRMILKLvgrSPSIVLLDDFDSFWNSEneNNELSFVSERQLQYFI 477
                 6899*****************754432444555555555....33333333333332211123349***************866678889999999999 PP

                 HHHHHTTTSSSTEEEEEEESSGGGSTHHHHSTTSS CS
         AAA  91 teldgvkkkeskvivigatnrpdkldpallrgRfd 125
                 + l  +k+ ++ ++++++ ++p kl+  l  +Rf 
  EPX71821.1 478 ERLTYLKSVKD-IMIVATVQNPGKLPADLN-SRFF 510
                 99999999655.999999999*********.9995 PP

  == domain 2  score: 134.0 bits;  conditional E-value: 8.2e-42
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTS CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkk 99 
                 vllyG  G+GKT la+++ + + v++++++g+e+l+ky+g se+ ir+lf++a+  + p++lf+DE+d++a++r ++++++++rvvnqLlt+ldg +++
  EPX71821.1 649 VLLYGYSGCGKTHLASSISNAFPVQLISVKGPEILDKYIGSSEQAIRNLFERAQLAK-PCVLFFDEFDSIAPRRGQDTTGVTDRVVNQLLTQLDGAEQY 746
                 79**************************************************98776.****************999*********************9 PP

                 SSTEEEEEEESSGGGSTHHHHS.TTSSEEEET CS
         AAA 100 eskvivigatnrpdkldpallr.gRfdrkiei 130
                 e+ v v++at+rpd++dpallr gR+d+ ++ 
  EPX71821.1 747 EG-VYVVAATTRPDMIDPALLRpGRLDKLVFC 777
                 87.************************98875 PP

>> PEX-1N  Peroxisome biogenesis factor 1, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.4   0.0   1.7e-19   8.4e-17       2      77 .]      99     173 ..      98     173 .. 0.97

  Alignments for each domain:
  == domain 1  score: 61.4 bits;  conditional E-value: 1.7e-19
      PEX-1N   2 tVevePltsdDwEiielhaefleenlLsQvravspgqvltvwlspttvakfkvtslepatskfvkLspdteviVaP 77 
                 + e++P ++dDwEi e++a++le+n+ + +r++ +g+ ++++  + t ++f+v + ep+  ++++Lsp++ev+V P
  EPX71821.1  99 KLEIKPDSPDDWEIAEQNADWLEKNFFNSYRII-SGKRFPIFFPSGTAITFQVMNAEPSFRDCGRLSPSSEVLVTP 173
                 789******************************.899*************************************98 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   3.8e-05     0.019      25      63 ..     381     420 ..     367     442 .. 0.75
   2 ?    0.9   0.0       1.1   5.3e+02     130     156 ..     440     466 ..     419     486 .. 0.68
   3 !   15.6   0.1   3.2e-05     0.016      23      48 ..     645     670 ..     635     682 .. 0.81
   4 ?    7.2   0.1     0.012       6.1     121     148 ..     692     718 ..     678     752 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 3.8e-05
      AAA_16  25 elvllsGesGvGKsslvrellralekdg.giflrgkcdql 63 
                  +vl+ G +G+GK+sl+r+l +  +++  +++ +  c++l
  EPX71821.1 381 YNVLVNGIKGSGKTSLLRSLNQKCCTSTvFHTEYISCTEL 420
                 589**********************995455566666666 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 1.1
      AAA_16 130 lsrderplvlvlDdlq..wadeaslqlla 156
                     ++p +++lDd++  w  e   + l+
  EPX71821.1 440 VG--RSPSIVLLDDFDsfWNSENENNELS 466
                 33..4679********8866665444444 PP

  == domain 3  score: 15.6 bits;  conditional E-value: 3.2e-05
      AAA_16  23 rpelvllsGesGvGKsslvrellral 48 
                  p  vll+G+sG+GK+ l+ ++ +a+
  EPX71821.1 645 LPTGVLLYGYSGCGKTHLASSISNAF 670
                 4689***************9988765 PP

  == domain 4  score: 7.2 bits;  conditional E-value: 0.012
      AAA_16 121 ellkrllallsrderplvlvlDdlqwad 148
                 +++++l+++++  ++p vl++D+++ + 
  EPX71821.1 692 QAIRNLFERAQL-AKPCVLFFDEFDSIA 718
                 789999999999.9***********543 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.2    0.0001     0.052       3      46 ..     383     421 ..     381     535 .. 0.87
   2 !    8.5   0.0    0.0035       1.7       3      22 ..     649     668 ..     647     674 .. 0.90
   3 ?    2.7   0.0      0.21   1.1e+02      73     115 ..     697     739 ..     676     763 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 0.0001
                 EEEEC-TTTCHHHHHHHHHHHHCTS-SCCCC-SEEEEEETTTTT CS
       NACHT   3 vilqGeaGsGKTtLlqklalawaegklpqgafklvFflslrels 46 
                 v+++G  GsGKT Ll++l ++  +++ ++ +     ++s+ el+
  EPX71821.1 383 VLVNGIKGSGKTSLLRSLNQKCCTSTVFHTE-----YISCTELN 421
                 89*******************9999999976.....55555554 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0035
                 EEEEC-TTTCHHHHHHHHHH CS
       NACHT   3 vilqGeaGsGKTtLlqklal 22 
                 v+l G +G+GKT+L+ ++  
  EPX71821.1 649 VLLYGYSGCGKTHLASSISN 668
                 7899************9976 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.21
                 HHHHCCSCCCEEEEEE-STT-SS-TCH.........HHHHHCT CS
       NACHT  73 wavllelperlLlilDglDelvtdlgqkekqpvrtlLselirk 115
                   ++++l++  +l +D +D ++   gq++   ++++ ++l+++
  EPX71821.1 697 LFERAQLAKPCVLFFDEFDSIAPRRGQDTTGVTDRVVNQLLTQ 739
                 445788999999***************6666666666666654 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.0   9.8e-05     0.049       5      76 ..     383     455 ..     380     497 .. 0.79
   2 !    8.7   0.0    0.0034       1.7       5      76 ..     649     717 ..     647     743 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 9.8e-05
      AAA_14   5 lvitGaRrvGKTtllkqlikell.vkkesilyinldderdkkladpe.kllelileklkeekktylflDEiqev 76 
                 +++ G++ +GKT ll+ l ++    +  ++ yi++ + +++++++++   +++il+++ +   ++++lD     
  EPX71821.1 383 VLVNGIKGSGKTSLLRSLNQKCCtSTVFHTEYISCTELNLSSFSKFSgFWDRMILKLVGR-SPSIVLLDDFDSF 455
                 789***************988888666788899999988888777763356888887655.8899999987665 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0034
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelileklkeekktylflDEiqev 76 
                 +++ G   +GKT l+  +  + +  + + + ++  +  dk +  +e+ ++ ++e+++  k  +lf+DE   +
  EPX71821.1 649 VLLYGYSGCGKTHLASSIS-NAF--PVQLISVKGPEILDKYIGSSEQAIRNLFERAQLAKPCVLFFDEFDSI 717
                 6789999*******88776.555..57888888888888777777666666666633358899*****8765 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.1    0.0015      0.75       8      65 ..     383     441 ..     380     481 .. 0.69
   2 !    7.4   0.0    0.0098       4.9       8      30 ..     649     671 ..     646     682 .. 0.83
   3 ?    1.1   0.0       0.9   4.5e+02      76     117 ..     692     741 ..     684     757 .. 0.67
   4 ?    0.6   0.0       1.3   6.4e+02      38      65 ..     770     797 ..     731     812 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.0015
      AAA_22   8 lvvtGesGtGKTtllrrlleqldeeakaeeerpevv....fvtlpsst.....sskdl.lrellralg 65 
                 ++v G +G+GKT llr l ++          + ++v    ++ +++++     + + +  r++l+ +g
  EPX71821.1 383 VLVNGIKGSGKTSLLRSLNQKC---------CTSTVfhteYISCTELNlssfsKFSGFwDRMILKLVG 441
                 67889***************98.........5555545554444444433232777774455555555 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0098
      AAA_22   8 lvvtGesGtGKTtllrrlleqld 30 
                 ++++G sG+GKT+l+  + + ++
  EPX71821.1 649 VLLYGYSGCGKTHLASSISNAFP 671
                 589************99988874 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.9
      AAA_22  76 eellealeqalraravielliiDEaqhlr....s......eealeeLrslln 117
                 +++++++e+a  a+  + +l  DE++ +     +      ++++++L + l+
  EPX71821.1 692 QAIRNLFERAQLAK--PCVLFFDEFDSIAprrgQdttgvtDRVVNQLLTQLD 741
                 44445555555555..55*********9876541556666777777766666 PP

  == domain 4  score: 0.6 bits;  conditional E-value: 1.3
      AAA_22  38 erpevvfvtlpsstsskdllrellralg 65 
                 + +++vf++lp++++++d++ ++l++ +
  EPX71821.1 770 RLDKLVFCDLPNKKERADFFAKMLEENQ 797
                 557889*************999998755 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.0    0.0032       1.6       1     138 []     382     509 ..     382     509 .. 0.64
   2 !   12.1   0.0   0.00028      0.14       1      32 [.     648     679 ..     648     767 .. 0.79

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0032
                 EEEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------G-SEEEEESGGG--.HHHHHHHHHHHHSSEEE... CS
       AAA_5   1 dvlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraaregeilvlDEverae.sevlnsLlslleerrlll.e 97 
                 +vl+ G +G+gK++l ++l +  +++++    + + te +l       +    +   +l+  +r+++i++lD+++    se  n  ls  +er+l+   
  EPX71821.1 382 NVLVNGIKGSGKTSLLRSLNQKCCTSTVFHTEYISCTELNLSSFS---KFSGFWDRMILKLVGRSPSIVLLDDFDSFWnSENENNELSFVSERQLQYfI 477
                 68999****************997765544444444444444333...447778888888889999999999998765466666666777777766212 PP

                 -SSSEEE---......-EEEEEESS--.-TT-TTHHHHTT- CS
       AAA_5  98 eggelvkaknddllerfrviatanpldrslnelspalrsRf 138
                 e+ ++ k  +     +++++at  ++     +l + l sRf
  EPX71821.1 478 ERLTYLKSVK-----DIMIVATVQNPG----KLPADLNSRF 509
                 2222222222.....277777777777....5566666665 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 0.00028
                 EEEEE--SSSSHHHHHHHGGGGBS--EEEEE- CS
       AAA_5   1 dvlLvGppGtgKselaerlaaalnreveyvql 32 
                 +vlL G +G+gK+ la +++ a+  ++  v +
  EPX71821.1 648 GVLLYGYSGCGKTHLASSISNAFPVQLISVKG 679
                 59*******************99776665555 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   0.0    0.0003      0.15       1      25 [.     383     411 ..     383     464 .. 0.78
   2 !    8.5   0.0    0.0058       2.9       1      22 [.     649     670 ..     649     754 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.0003
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf.....g 25 
                 +l++G+ G+GKt+l + L++++ +     +
  EPX71821.1 383 VLVNGIKGSGKTSLLRSLNQKC-CtstvfH 411
                 79****************9997.3344442 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0058
      AAA_18   1 IlltGtpGvGKttlakeLskrl 22 
                 +ll G++G+GKt la  +s+  
  EPX71821.1 649 VLLYGYSGCGKTHLASSISNAF 670
                 799*************999875 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.4   0.00044      0.22      26     169 ..     373     509 ..     367     517 .. 0.69
   2 ?    6.4   0.0     0.012       5.8      34      58 ..     647     671 ..     628     680 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00044
       AAA_7  26 lelllknkkpvllvGptGtGKtviikdllkkldkekylsltinfsaqtsanqlqdiieskle.krrkgvygPpggkklvvFvDDlnmpakekygaqppi 123
                 +el ++ +++vl+ G +G+GKt+++++l +k+      + t+  + + s ++l     sk+     + ++   g    +v +DD++      +++ + +
  EPX71821.1 373 IELSMNFGYNVLVNGIKGSGKTSLLRSLNQKCC-----TSTVFHTEYISCTELNLSSFSKFSgFWDRMILKLVGRSPSIVLLDDFDS----FWNSENEN 462
                 677888999*************98777655544.....4444445555555555444444441355556666666777888888875....46666666 PP

       AAA_7 124 ellRqlldyggwYdrkkl.efkeikdvqlvaamgppgggrneitpRl 169
                 + l  + +++  Y  ++l  +k++kd+++va +++pg+   ++++R+
  EPX71821.1 463 NELSFVSERQLQYFIERLtYLKSVKDIMIVATVQNPGKLPADLNSRF 509
                 77777888888888877646778888888888888888888888887 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.012
       AAA_7  34 kpvllvGptGtGKtviikdllkkld 58 
                   vll+G +G+GKt +++++ ++++
  EPX71821.1 647 TGVLLYGYSGCGKTHLASSISNAFP 671
                 679***************9999887 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       5.7   2.8e+03       9      22 ..     550     563 ..     545     573 .. 0.79
   2 !   19.9   0.0   9.4e-07   0.00047       5      36 ..     805     836 ..     801     847 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 5.7
   AAA_lid_3   9 erTeGySGADlaal 22 
                 ++T+G++  Dl+ +
  EPX71821.1 550 RKTDGFTLLDLSLV 563
                 79****97777665 PP

  == domain 2  score: 19.9 bits;  conditional E-value: 9.4e-07
   AAA_lid_3   5 keLAerTeGySGADlaalcreAallAlrrgik 36 
                  eL+ +T+GyS ADl+++  eA l A+ + +k
  EPX71821.1 805 TELVFQTHGYSYADLSSIFTEAHLIAVHHYLK 836
                 589************************99766 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0    0.0015      0.76      48     130 ..     381     465 ..     357     475 .. 0.81
   2 !   10.4   0.0    0.0008       0.4      49      69 ..     648     668 ..     639     678 .. 0.87

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0015
   IstB_IS21  48 enivllGpsGvGKshlaialgveavr.aglsvlfvrvedLveelkrarrdgklaralkrll.kv.dllilDdlgllpldqaeaell 130
                  n+++ G  G GK+ l  +l ++ ++ + +++ +++ ++L    +  +  g   r++ +l+ ++ ++++lDd+     +++e+++l
  EPX71821.1 381 YNVLVNGIKGSGKTSLLRSLNQKCCTsTVFHTEYISCTELNL-SSFSKFSGFWDRMILKLVgRSpSIVLLDDFDSFWNSENENNEL 465
                 599**********************9566899******9954.4667778888888777652334899999998888888888776 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.0008
   IstB_IS21  49 nivllGpsGvGKshlaialgv 69 
                 +++l G sG GK+hla +++ 
  EPX71821.1 648 GVLLYGYSGCGKTHLASSISN 668
                 689*************99976 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0    0.0052       2.6       2      24 ..     383     405 ..     383     494 .. 0.91
   2 !   11.6   0.0   0.00047      0.23       2      51 ..     649     700 ..     649     792 .. 0.66

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0052
      AAA_33   2 vllvGlpGsGKstlaerllkklg 24 
                 vl+ G +GsGK+ l+++l +k  
  EPX71821.1 383 VLVNGIKGSGKTSLLRSLNQKCC 405
                 6899*************998876 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 0.00047
      AAA_33   2 vllvGlpGsGKstlaerllkklg..avllssdtlrrrlfgtdqqsktdytrv 51 
                 vll G +G+GK++la ++ ++ +   + +  +++++++ g+ +q ++++ + 
  EPX71821.1 649 VLLYGYSGCGKTHLASSISNAFPvqLISVKGPEILDKYIGSSEQAIRNLFER 700
                 6899**************9999955555566666666666555555533222 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.2    0.0057       2.8       3      33 ..     372     402 ..     370     411 .. 0.90
   2 !   10.7   0.0    0.0011      0.55      13      72 ..     648     705 ..     638     802 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0057
                 EEEEEEETTSEEEEEESTTSSHHHHHHHHTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   3 nvslklkegekvaivGenGaGKStLlkllag 33 
                  ++l+++ g  v + G  G+GK++Ll+ l +
  EPX71821.1 372 SIELSMNFGYNVLVNGIKGSGKTSLLRSLNQ 402
                 68899999*******************9976 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.0011
                 EEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-T CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  13 kvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfp 72 
                  v + G +G+GK+ L++ +++    +   i ++g ++ ++ + s+++ i+ l++ +ql +
  EPX71821.1 648 GVLLYGYSGCGKTHLASSISNAFPVQ--LISVKGPEILDKYIGSSEQAIRNLFERAQLAK 705
                 47899***************999864..56679999999999999999999998887765 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.0   0.00039      0.19      54     128 ..     381     465 ..     369     480 .. 0.70
   2 ?    4.6   0.0      0.03        15      55      82 ..     648     675 ..     640     716 .. 0.67

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00039
      DUF815  54 nnvLLwGarGtGKSslvkallneyaeeg......Lrlievekedlkelpklvellr...erperfilfvDDL.sFeeeeeeyksL 128
                  nvL+ G +G+GK sl+++l +++++++      +   e++ ++ ++++   + +      +   i+++DD  sF ++e+e  +L
  EPX71821.1 381 YNVLVNGIKGSGKTSLLRSLNQKCCTSTvfhteyISCTELNLSSFSKFSGFWDRMIlklVGRSPSIVLLDDFdSFWNSENENNEL 465
                 69*********************99988777555555555555555555444432211112234577777766787777777666 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.03
      DUF815  55 nvLLwGarGtGKSslvkallneyaeegL 82 
                  vLL+G  G+GK  l  ++ n++  + +
  EPX71821.1 648 GVLLYGYSGCGKTHLASSISNAFPVQLI 675
                 59************99999998876653 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0     0.021        10       3      24 ..     381     401 ..     380     441 .. 0.86
   2 !   10.1   0.0   0.00095      0.47       5      26 ..     649     669 ..     646     678 .. 0.87

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.021
      AAA_24   3 lkiliyGpsgiGKTtlakelgp 24 
                 +++l+ G  g+GKT+l+++l +
  EPX71821.1 381 YNVLVNGIKGSGKTSLLRSL-N 401
                 7899**************99.3 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00095
      AAA_24   5 iliyGpsgiGKTtlakelgpkp 26 
                 +l+yG sg GKT+la+++  ++
  EPX71821.1 649 VLLYGYSGCGKTHLASSI-SNA 669
                 79**************99.655 PP

>> Bac_DnaA  Bacterial dnaA  protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.1     0.029        14      37     197 ..     383     551 ..     372     556 .. 0.67
   2 !   10.1   0.0    0.0011      0.53      37      57 ..     649     669 ..     644     695 .. 0.90

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.029
                 EEEE-SSSSSHHHHHHHHHHHHHHHSSSS-EEEEEHHHH.HHHHHHHHHTT-HHHHHHHHTT-SEEEEE-GGGGTT-HHHHHHHHHH...........H CS
    Bac_DnaA  37 lfiygevGlGktHLlkaignevlenapelrvvYltaeeF.lnelvkalrdkkaeefkeklrkvDvLliDDiqflagkektqeelfht...........f 123
                 +++ g  G Gkt Ll++++++  +++   +  Y++  e  l+++ k     +   +k   r+  ++l+DD   + + e+ ++el  +           +
  EPX71821.1 383 VLVNGIKGSGKTSLLRSLNQKCCTST-VFHTEYISCTELnLSSFSKFSGFWDRMILKLVGRSPSIVLLDDFDSFWNSENENNELSFVserqlqyfierL 480
                 6788999***********99988765.567899987766255555555557777888888999999999999888888777776432111111110003 PP

                 HHHHTTT-EEEEEESS-TTT-SS--HHHHHHHHSSEEEE-----HHHHHHHHHHHHHHTT----TTHHHHHHHH CS
    Bac_DnaA 124 nalleegkqvvlssDrsPkeleeledrlrsrfeaGlvvdieppdletrlailkkkieaeklevpeevlefiaer 197
                 + l   +  +++++ ++P +l    + l+srf     + i p   + r +il+   +  ++ +pee+l+ ++++
  EPX71821.1 481 TYLKSVKDIMIVATVQNPGKL---PADLNSRFFFQQRAIIPPILINDREEILRFFFKDLNQTIPEEILRTMSRK 551
                 333333333445555666654...46788888887777788888888888888888888888888888777765 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.0011
                 EEEE-SSSSSHHHHHHHHHHH CS
    Bac_DnaA  37 lfiygevGlGktHLlkaigne 57 
                 +++yg +G GktHL  +i+n+
  EPX71821.1 649 VLLYGYSGCGKTHLASSISNA 669
                 79****************987 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0    0.0062       3.1       8      46 ..     366     404 ..     361     425 .. 0.81
   2 !    7.6   0.0    0.0058       2.9      21      44 ..     645     668 ..     629     679 .. 0.84
   3 ?   -2.9   0.0       9.7   4.8e+03      90     108 ..     702     720 ..     686     757 .. 0.71

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0062
                      HHHHHHHHHHHCTSSS-EEEECSTTSSHHHHHHHHHHHS CS
  Sigma54_activat   8 lkelleqikkvaktdlsvlitGesGtGKellaraiheas 46 
                      ++el+++i+  ++   +vl++G +G+GK+ l r++ ++ 
       EPX71821.1 366 FQELMSSIELSMNFGYNVLVNGIKGSGKTSLLRSLNQKC 404
                      688899999999999***************999998865 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0058
                      SSS-EEEECSTTSSHHHHHHHHHH CS
  Sigma54_activat  21 tdlsvlitGesGtGKellaraihe 44 
                       ++ vl+ G sG+GK+ la++i +
       EPX71821.1 645 LPTGVLLYGYSGCGKTHLASSISN 668
                      5678****************9976 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 9.7
                      HHTTTSEEEEETGGGS-HH CS
  Sigma54_activat  90 ekadgGtlfLDeigelple 108
                      + a+  +lf+De  ++ ++
       EPX71821.1 702 QLAKPCVLFFDEFDSIAPR 720
                      5577789999998887654 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0     0.021        10      18      44 ..     377     405 ..     355     418 .. 0.71
   2 !    9.7   0.0    0.0017      0.84      19      51 ..     646     680 ..     625     694 .. 0.80

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.021
                 H..TEEEEEEESTTSSHHHHHHHHHHHTT CS
        TsaE  18 l..gdvilLeGdLGaGKTtlvrglakalg 44 
                 +  g  +l +G  G+GKT l r+l +++ 
  EPX71821.1 377 MnfGYNVLVNGIKGSGKTSLLRSLNQKCC 405
                 2334569****************998874 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.0017
                 TEEEEEEESTTSSHHHHHHHHHHHTT--..----T CS
        TsaE  19 gdvilLeGdLGaGKTtlvrglakalgve..evkSP 51 
                  + +lL+G  G+GKT+l+ ++ +a+ v+  +vk P
  EPX71821.1 646 PTGVLLYGYSGCGKTHLASSISNAFPVQliSVKGP 680
                 4459*********************9998888877 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0     0.074        37       2      27 ..     384     415 ..     383     470 .. 0.60
   2 !   10.3   0.0    0.0014      0.69       1      24 [.     649     672 ..     649     735 .. 0.81

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.074
  RNA_helicase   2 wlyGpsgeGKStlakeLakallkkl......k 27 
                   ++ G +g GK++l ++L ++ +++        
    EPX71821.1 384 LVNGIKGSGKTSLLRSLNQKCCTSTvfhteyI 415
                   68899************999997764555442 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.0014
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallk 24 
                   ++lyG sg+GK++la ++++a+  
    EPX71821.1 649 VLLYGYSGCGKTHLASSISNAFPV 672
                   689**************9888754 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0      0.28   1.4e+02      12      59 ..     359     406 ..     350     418 .. 0.74
   2 ?    2.0   0.0      0.26   1.3e+02     128     163 ..     430     464 ..     415     494 .. 0.76
   3 ?    6.3   0.0     0.012       6.2      36      54 ..     649     667 ..     642     670 .. 0.88
   4 ?   -0.9   0.0       2.1   1.1e+03     127     172 ..     691     736 ..     684     748 .. 0.87
   5 ?   -2.5   0.1       6.3   3.1e+03     178     191 ..     823     836 ..     816     838 .. 0.80

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.28
      AAA_25  12 vadlaapppprrwlvkgllpagelallaGapgtGKttlaldlalavat 59 
                 ++d  +p +++   ++  +  g  +l+ G  g+GKt l+ +l  +++t
  EPX71821.1 359 TRDMPNPFQELMSSIELSMNFGYNVLVNGIKGSGKTSLLRSLNQKCCT 406
                 555566666666666666667788999***********9988777765 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.26
      AAA_25 128 advdaleaaieevegvrlvviDplsralggdensns 163
                 +++d+++ ++     +  v +D ++++++ ++++n+
  EPX71821.1 430 GFWDRMILKLVG-RSPSIVLLDDFDSFWNSENENNE 464
                 566777766667.4699*************555554 PP

  == domain 3  score: 6.3 bits;  conditional E-value: 0.012
      AAA_25  36 allaGapgtGKttlaldla 54 
                 +ll+G +g+GKt la++++
  EPX71821.1 649 VLLYGYSGCGKTHLASSIS 667
                 69*************9876 PP

  == domain 4  score: -0.9 bits;  conditional E-value: 2.1
      AAA_25 127 tadvdaleaaieevegvrlvviDplsralggdensnsdv.galveal 172
                 ++++++l ++++  +++ ++ +D ++++ +   ++ + v +++v++l
  EPX71821.1 691 EQAIRNLFERAQL-AKPCVLFFDEFDSIAPRRGQDTTGVtDRVVNQL 736
                 5788899999888.6799*************9999999889999887 PP

  == domain 5  score: -2.5 bits;  conditional E-value: 6.3
      AAA_25 178 rtgaavllvhHvgK 191
                  t a++++vhH  K
  EPX71821.1 823 FTEAHLIAVHHYLK 836
                 689********766 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0     6e-05      0.03       6     105 ..     649     742 ..     646     747 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 6e-05
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTS...EEEEETGGG----.---------HHHHHHHH CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG...ivllDEidKihpk.essgadvSregVqrdLL 100
                 +ll g +g+Gkt la ++++   v    +li +   e+l      +++ + ++a     ++++     ++++DE d i+p+ ++ +  v    V++ LL
  EPX71821.1 649 VLLYGYSGCGKTHLASSISNAFPV----QLISVKGPEILD-----KYIGSSEQAIRNLFERAQLAkpcVLFFDEFDSIAPRrGQDTTGVTDR-VVNQLL 737
                 577899999999999999999997....999999999998.....88888888888888888877888************977777777765.555566 PP

                 HHHH- CS
       AAA_2 101 qileg 105
                   l+g
  EPX71821.1 738 TQLDG 742
                 55666 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0     0.017       8.7      23      68 ..     383     428 ..     367     492 .. 0.77
   2 ?    6.0   0.1      0.02       9.8      23      42 ..     649     668 ..     636     677 .. 0.84
   3 ?   -0.5   0.0       1.9   9.6e+02      80     131 ..     668     718 ..     663     762 .. 0.73

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.017
    ATPase_2  23 yfiYGpegsGKtaLlkeiienledkdkyviyyialreesiskldef 68 
                 +++ G +gsGKt+Ll+ + ++   +   +  yi+  e ++s++++f
  EPX71821.1 383 VLVNGIKGSGKTSLLRSLNQKCCTSTVFHTEYISCTELNLSSFSKF 428
                 5789************998887554444444555666666666655 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.02
    ATPase_2  23 yfiYGpegsGKtaLlkeiie 42 
                 +++YG  g+GKt L   i +
  EPX71821.1 649 VLLYGYSGCGKTHLASSISN 668
                 689***********987755 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 1.9
    ATPase_2  80 kalgiavpkaeleeilkeksklvfkaielllekikkkgkkiiiiiDelqkli 131
                 +a+  ++ ++++ eil++ +   ++ai +l+e  +   k  ++++De+  + 
  EPX71821.1 668 NAFPVQLISVKGPEILDKYIGSSEQAIRNLFERAQLA-KPCVLFFDEFDSIA 718
                 5555566666777788888888888999988887654.66999****98876 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       7.5   3.7e+03      36      51 ..     383     398 ..     380     407 .. 0.83
   2 ?   13.2   0.0   0.00011     0.057      36      95 ..     649     716 ..     644     767 .. 0.74

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 7.5
      RuvB_N  36 vllyGpPGlGkttlak 51 
                 vl+ G  G Gkt+l +
  EPX71821.1 383 VLVNGIKGSGKTSLLR 398
                 8999********9966 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 0.00011
      RuvB_N  36 vllyGpPGlGkttlakiiakelgvklkitsgPvl.ek.....agdlaall..tnleekdvlfideihr 95 
                 vllyG  G Gkt la+ i++ + v+l +  gP + +k     ++ +  l+  ++l +  vlf de   
  EPX71821.1 649 VLLYGYSGCGKTHLASSISNAFPVQLISVKGPEIlDKyigssEQAIRNLFerAQLAKPCVLFFDEFDS 716
                 9*******************************762332111122333343223455556777777665 PP

>> dNK  Deoxynucleoside kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.1     0.034        17       3      24 ..     385     406 ..     383     423 .. 0.82
   2 ?    2.6   0.0      0.21     1e+02       5      46 ..     653     698 ..     649     705 .. 0.75
   3 ?    2.7   0.0      0.19        95      82     117 ..     877     911 ..     855     920 .. 0.82

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.034
                 EEESTTSSHHHHHHHHHCCSTC CS
         dNK   3 veGnIgaGKstlvklLskklgv 24 
                 v+G  g+GK++l+  L++k+ +
  EPX71821.1 385 VNGIKGSGKTSLLRSLNQKCCT 406
                 89999************99863 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.21
                 ESTTSSHHHHHHHHHCCSTCEEE....E-HHHHCCSSSSHHHHHHH CS
         dNK   5 GnIgaGKstlvklLskklgvkvf....eEpvdkwtnvqknlLekfY 46 
                 G  g+GK+ l++ +s++++v+ +    +E+ dk+    ++ +++++
  EPX71821.1 653 GYSGCGKTHLASSISNAFPVQLIsvkgPEILDKYIGSSEQAIRNLF 698
                 7779***************988733334788888666666666655 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.19
                 S-HHHHHHTHHHHHHHTTSS-HHHHHHHHHHHHHHH CS
         dNK  82 RsiysdryiFakalaekgtlseeelkiykelldnll 117
                   i +++ iF ++ + + ++seee++++++++++++
  EPX71821.1 877 FEINKEC-IFSALRNTNSSISEEEYNKLASIYKQYT 911
                 5677788.************************9988 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.051        26      22      44 ..     382     404 ..     366     465 .. 0.77
   2 ?    7.6   0.0     0.004         2      23      44 ..     649     670 ..     639     674 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.051
                 EEEEEESTTSSHHHHHHHHCCSH CS
      NB-ARC  22 vvalvGmgGvGKttlakqilnks 44 
                  v + G  G+GKt l+++ ++k 
  EPX71821.1 382 NVLVNGIKGSGKTSLLRSLNQKC 404
                 47899*************99984 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.004
                 EEEEESTTSSHHHHHHHHCCSH CS
      NB-ARC  23 valvGmgGvGKttlakqilnks 44 
                 v l+G  G+GKt la++i n +
  EPX71821.1 649 VLLYGYSGCGKTHLASSISNAF 670
                 679***************9875 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0     0.026        13      24      81 ..     351     411 ..     334     430 .. 0.75
   2 ?    6.6   0.0    0.0079       3.9      52      98 ..     648     692 ..     640     703 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.026
                 XXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  24 eglvGqkkareaagvivelikekkla...GravLlaGpsgtGktalaiaiskelgedvpfv 81 
                 +g v  +k r+    + el+ + +l+   G  vL+ G +g+Gkt+l  ++ ++  +++ f 
  EPX71821.1 351 NGRVSHTKTRDMPNPFQELMSSIELSmnfGYNVLVNGIKGSGKTSLLRSLNQKCCTSTVFH 411
                 56666677777777777777666665444889**************999999999888875 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0079
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  52 avLlaGpsgtGktalaiaiskelgedvpfvalsgsevyslevkktev 98 
                 +vLl G sg Gkt la +is+++   v  ++++g e+    +  +e 
  EPX71821.1 648 GVLLYGYSGCGKTHLASSISNAFP--VQLISVKGPEILDKYIGSSEQ 692
                 79******************9987..778888888888777776664 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.0    0.0042       2.1       2      29 ..     384     411 ..     383     452 .. 0.69
   2 ?    3.8   0.0     0.084        42       5      25 ..     653     674 ..     649     718 .. 0.57

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0042
  Viral_helicase1   2 vvhGvpGcGKStlirkllrtsliltvnr 29 
                      +v G+ G+GK++l+r+l ++++  tv +
       EPX71821.1 384 LVNGIKGSGKTSLLRSLNQKCCTSTVFH 411
                      799**************99963333333 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.084
  Viral_helicase1   5 GvpGcGKStlirkllrts.lil 25 
                      G  GcGK++l  ++ +   ++l
       EPX71821.1 653 GYSGCGKTHLASSISNAFpVQL 674
                      788******9998887756333 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.1   0.00064      0.32       5      37 ..     382     414 ..     380     429 .. 0.82
   2 ?    0.8   0.0      0.57   2.8e+02       6      24 ..     649     667 ..     646     693 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00064
                 EEEEE-STTSSHHHHHHHHHHSS---B---SS- CS
       SRPRB   5 avllvGlsdsGKTslftrLttdsvkktvtSqes 37 
                 +vl+ G++ sGKTsl+  L ++  ++tv   e 
  EPX71821.1 382 NVLVNGIKGSGKTSLLRSLNQKCCTSTVFHTEY 414
                 58999*****************99999977654 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.57
                 EEEE-STTSSHHHHHHHHH CS
       SRPRB   6 vllvGlsdsGKTslftrLt 24 
                 vll G s +GKT l   ++
  EPX71821.1 649 VLLYGYSGCGKTHLASSIS 667
                 89**********9977665 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0      0.03        15      14      44 ..     372     402 ..     367     431 .. 0.80
   2 ?    5.6   0.0     0.019       9.4      25      47 ..     649     671 ..     647     684 .. 0.90
   3 ?   -3.2   0.0         9   4.5e+03     104     117 ..     703     716 ..     700     720 .. 0.81

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.03
  Mg_chelatase  14 aleiaaaGgHnlllvGppGsGKtmlakrlps 44 
                    +e++   g n+l+ G  GsGKt l + l++
    EPX71821.1 372 SIELSMNFGYNVLVNGIKGSGKTSLLRSLNQ 402
                   5778888899***************999876 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.019
  Mg_chelatase  25 lllvGppGsGKtmlakrlpsllp 47 
                   +ll+G +G+GKt la+ +++ +p
    EPX71821.1 649 VLLYGYSGCGKTHLASSISNAFP 671
                   79**************9988776 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 9
  Mg_chelatase 104 lahnGvLfLDElpe 117
                   la+  vLf+DE+  
    EPX71821.1 703 LAKPCVLFFDEFDS 716
                   78999******876 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.1     0.014       6.8       2      31 ..     383     415 ..     382     424 .. 0.80
   2 ?    4.1   0.0       0.1        51       2      34 ..     649     682 ..     648     709 .. 0.66

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.014
      AAA_28   2 ivitGgestGKTtlleaLaar...gypvvpEaa 31 
                 + + G  ++GKT+ll+ L+++    ++ ++E+ 
  EPX71821.1 383 VLVNGIKGSGKTSLLRSLNQKcctSTVFHTEYI 415
                 6677889************98764444558875 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.1
      AAA_28   2 ivitGgestGKTtlleaLaar.gypvvpEaarei 34 
                 + + G +++GKT l++ +++   ++ +   + ei
  EPX71821.1 649 VLLYGYSGCGKTHLASSISNAfPVQLISVKGPEI 682
                 6788999***********9886444443333333 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0     0.082        41      19      40 ..     383     404 ..     381     411 .. 0.87
   2 ?    6.9   0.0    0.0069       3.4      15      40 ..     645     670 ..     636     678 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.082
  Zeta_toxin  19 illgGqpGAGKselaellkdel 40 
                 +l+ G  G+GK++l++ l+++ 
  EPX71821.1 383 VLVNGIKGSGKTSLLRSLNQKC 404
                 789999**********998875 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0069
  Zeta_toxin  15 rPklillgGqpGAGKselaellkdel 40 
                  P+ +ll G +G+GK++la+ + +++
  EPX71821.1 645 LPTGVLLYGYSGCGKTHLASSISNAF 670
                 5899****************998876 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0     0.041        20       4      24 ..     383     403 ..     381     420 .. 0.85
   2 ?    5.6   0.0     0.024        12       4      23 ..     649     668 ..     647     679 .. 0.90

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.041
   PduV-EutP   4 illiGkvgsGKttLtqalkge 24 
                 +l+ G  gsGKt+L ++l+++
  EPX71821.1 383 VLVNGIKGSGKTSLLRSLNQK 403
                 788999************986 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.024
   PduV-EutP   4 illiGkvgsGKttLtqalkg 23 
                 +ll G +g+GKt L+ ++++
  EPX71821.1 649 VLLYGYSGCGKTHLASSISN 668
                 899************99987 PP

>> Olfactory_mark  Olfactory marker protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0    0.0003      0.15      88     150 ..     448     511 ..     420     512 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.0003
                     B-SS-EEEEE-TTSS.SEE.E-HHHHHHHHHHHHHHHHH-SEEEEEEEE-TT--GGGEEEEEEE CS
  Olfactory_mark  88 llepvgvfwrkaddeaevk.cleadaqefGeriaelakvrkvmyfllafkdGlepaklkcsivf 150
                     ll+    fw+++++++e++ + e ++q f er++ l  v+ +m      + G  pa+l++   f
      EPX71821.1 448 LLDDFDSFWNSENENNELSfVSERQLQYFIERLTYLKSVKDIMIVATVQNPGKLPADLNSRFFF 511
                     89999*********9888725799*******************999999999999999887666 PP

>> PIF1  PIF1-like helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.66   3.3e+02     219     252 ..       6      39 ..       2     104 .. 0.66
   2 ?    3.6   0.0     0.062        31      18      47 ..     376     405 ..     365     416 .. 0.82
   3 ?    3.6   0.0     0.061        30      13      46 ..     637     670 ..     631     677 .. 0.81

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.66
                 -CCCCHH.................HHCHCCS--- CS
        PIF1 219 needeeealieiPedlllkksedkieeivsevyg 252
                 + +++++ +++iP++lll+ ++  +e  v   ++
  EPX71821.1   6 SFKNTRSCFVNIPDSLLLQLDGPLQEYAVCVEVP 39 
                 667888899********99888555544433333 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.062
                 ..HCTS-EEEEESTTSSCHHHHHHHHHHCH CS
        PIF1  18 lnekgklfFvtGsgGtgKtflwkallkklr 47 
                 + + g ++ v+G  G+gKt l++ l +k+ 
  EPX71821.1 376 SMNFGYNVLVNGIKGSGKTSLLRSLNQKCC 405
                 456788999****************99875 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.061
                 H......HCTS-EEEEESTTSSCHHHHHHHHHHC CS
        PIF1  13 iieavlnekgklfFvtGsgGtgKtflwkallkkl 46 
                 i+++ + + +  + ++G++G gKt l   ++++ 
  EPX71821.1 637 IYKQCSLRLPTGVLLYGYSGCGKTHLASSISNAF 670
                 555666677788899************9999876 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0     0.014       7.2      23      39 ..     380     397 ..     368     406 .. 0.81
   2 ?    3.2   0.0      0.15        76      22      38 ..     647     662 ..     634     670 .. 0.75

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.014
      AAA_29  23 g.atlltGpsGsGKSTll 39 
                 g ++l+ G  GsGK++ll
  EPX71821.1 380 GyNVLVNGIKGSGKTSLL 397
                 4589************98 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.15
      AAA_29  22 kgatlltGpsGsGKSTl 38 
                  g +ll G sG GK+ l
  EPX71821.1 647 TG-VLLYGYSGCGKTHL 662
                 45.9**********876 PP

>> PEX-2N  Peroxisome biogenesis factor 1, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0    0.0011      0.55       3      78 ..       5      87 ..       3      91 .. 0.60

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.0011
                EEEE--SSS-EEE-HHHHHHTT..--TT-.-EEEESSS.-.....-EEE-EEE-SS-------EEEEEHHHHHHTT--TT-EEE CS
      PEX-2N  3 vkfnnakncFlhlpsklvsqLr..lqenq.alelswgdsq.....pvfLsWveerssssqdeneveinrqlgeklGlkdGeqvf 78
                ++f n++ cF+++p +l+ qL   lqe    +e+ + +++     + + +  +   s s+  +++ei    ++ lGl d e v+
  EPX71821.1  5 ISFKNTRSCFVNIPDSLLLQLDgpLQEYAvCVEVPMTKEDdklikNHYFGI-SGLPSLSTTCEVIEIDPVYAHVLGLADSERVY 87
                78******************9743554321456655443311111233332.34444445556777777777777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (932 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       619  (0.0345251); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        75  (0.00418317); expected 17.9 (0.001)
Passed Fwd filter:                        36  (0.00200792); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              36  [number of targets reported over threshold]
# CPU time: 0.88u 0.33s 00:00:01.21 Elapsed: 00:00:00.53
# Mc/sec: 5253.75
//
Query:       EPX71822.1  [L=610]
Description: WD repeat containing cyclophilin family peptidyl- prolyl cis-trans isomerase Cyp9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.4e-47  161.9   0.0      3e-47  160.8   0.0    1.6  1  Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans iso
    5.4e-06   27.0   2.3       0.51   11.3   0.0    4.3  4  WD40           WD domain, G-beta repeat
     0.0043   17.3   0.0        7.3    7.0   0.0    3.3  3  ANAPC4_WD40    Anaphase-promoting complex subunit 4 WD40 doma


Domain annotation for each model (and alignments):
>> Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  160.8   0.0   5.1e-51     3e-47       4     156 ..     459     605 ..     456     607 .. 0.92

  Alignments for each domain:
  == domain 1  score: 160.8 bits;  conditional E-value: 5.1e-51
  Pro_isomerase   4 ietsskGrivieLfadkaPktvenFlklvkegfYdgttFhRvikgfmvqgGdptgktsageqekkggesi..raipdEitsklkh.krGalamart 96 
                    ++t  +G+i i+L +++aPk+v+nF  ++ +g+Yd+t+FhR+ik+fm+qgGdp g+++       ggesi  ++++dE++++lkh ++++++ma++
     EPX71822.1 459 LHTT-QGDISIKLLPEEAPKAVQNFTTHAVNGYYDNTIFHRIIKNFMIQGGDPLGDGT-------GGESIwgKDFEDEFSPNLKHdRPFTVSMANS 546
                    6784.9*************************************************966.......333444469******999**888******** PP

  Pro_isomerase  97 gkepnsagsqFfItlkeaphldgkytvFGkVveGmdvvekiekvetde.erpkknvkivsa 156
                    g  p+++gsqFfIt++ +p+ldgk+t+FG+   G+dvv +ie+ etd+ +rp +  ki+++
     EPX71822.1 547 G--PDTNGSQFFITTDLTPWLDGKHTIFGRAYAGLDVVHRIEQSETDKyDRPLESSKIINI 605
                    8..8*****************************************************9986 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.2    0.0023        14      15      37 ..      52      73 ..      41      74 .. 0.73
   2 !   11.3   0.0   8.5e-05      0.51       4      38 .]      83     118 ..      80     118 .. 0.80
   3 ?   -1.1   0.0       0.7   4.2e+03       5      18 ..     173     206 ..     169     212 .. 0.52
   4 !    5.4   0.0    0.0062        37       8      38 .]     233     265 ..     226     265 .. 0.79

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0023
                EEEEETTSSEEEEEETTSEEEEE CS
        WD40 15 slafspdgawlasGsdDgtvriW 37
                s+ +s  ++++++ s+Dg+v++W
  EPX71822.1 52 SC-YSTKSNLILTISYDGHVKFW 73
                44.6777888775566******* PP

  == domain 2  score: 11.3 bits;  conditional E-value: 8.5e-05
                 EEEEESSSS..E.EEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGHss..v.tslafspdgawlasGsdDgtvriWd 38 
                 ++ + +H++  + t    s + + l+++ dD+tv+++d
  EPX71822.1  83 IKDFPAHNGrvIsTY--LSTNERILSTCADDNTVKVFD 118
                 567889966655555..5999999************98 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 0.7
                 EEEESS.SS......EEEEE.............E CS
        WD40   5 rtltGH.ss......vtsla.............f 18 
                 ++ + H ++      v+sl+             +
  EPX71822.1 173 YSVKKHsTPvhvleyVNSLDcmlsvdqggmveyW 206
                 5566664445555558888444444444444444 PP

  == domain 4  score: 5.4 bits;  conditional E-value: 0.0062
                 ESSSSE.EEEEEETTSSEEEEE.ET.TSEEEEEE CS
        WD40   8 tGHssv.tslafspdgawlasG.sd.DgtvriWd 38 
                 +  +sv +s++ sp+g++++ + s+ D +vr++d
  EPX71822.1 233 KKSKSVpSSIQISPSGKYFS-SiSYpDWKVRVFD 265
                 545678899*********84.56767*****998 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.0   0.0    0.0012       7.3       3      76 ..      54     128 ..      52     137 .. 0.72
   2 ?   -1.9   0.0      0.73   4.3e+03      49      89 ..     146     187 ..     143     190 .. 0.69
   3 !    6.2   0.0    0.0021        13      42      88 ..     240     287 ..     224     300 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0012
  ANAPC4_WD40   3 wcptmDLiAlatedgellvfRlngqrvwtl.eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhsl 76 
                  ++ + +Li  ++ dg++         +  + + ++++++v s   + ++++L    +d++v+++d+e  ++v+ +
   EPX71822.1  54 YSTKSNLILTISYDGHVKFWHKTTDGIEYIkDFPAHNGRVISTYLSTNERILSTCADDNTVKVFDVEGIDMVNII 128
                  5555555555555665555444443333333446788889999999*********************99888765 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.73
  ANAPC4_WD40  49 dgklLavaysdg.evrlldae.sgkvvhslsvksekavtclgW 89 
                  ++++La++ +++  v ++d e +g+v+ s++ +s+  v  l++
   EPX71822.1 146 KEEMLAISDANSpLVYFFDLEgDGNVLYSVKKHSTP-VHVLEY 187
                  677888888887456677776567888888877774.666665 PP

  == domain 3  score: 6.2 bits;  conditional E-value: 0.0021
  ANAPC4_WD40  42 rsLaWkpdgklLa.vaysdgevrlldaesgkvvhslsvksekavtclg 88 
                  +s++ +p+gk +  ++y d +vr++d++sg++v +++ +  +a ++++
   EPX71822.1 240 SSIQISPSGKYFSsISYPDWKVRVFDVKSGRIVLEFDEHPLDAAKKME 287
                  467778888887537999*****************9999887666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (610 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       399  (0.0222544); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.29s 00:00:00.85 Elapsed: 00:00:00.45
# Mc/sec: 4115.02
//
Query:       EPX71823.1  [L=837]
Description: argonaute [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-96  323.7   0.0    1.6e-96  323.2   0.0    1.2  1  Piwi      Piwi domain
    1.5e-22   79.6   0.0    4.7e-22   78.1   0.0    1.9  1  ArgoMid   Mid domain of argonaute
    9.5e-20   70.0   0.9    3.3e-19   68.3   0.9    2.1  1  ArgoL1    Argonaute linker 1 domain
      5e-19   68.5   0.2    8.7e-19   67.7   0.2    1.4  1  PAZ       PAZ domain
    8.3e-18   65.3   0.0    1.8e-17   64.2   0.0    1.6  1  ArgoN     N-terminal domain of argonaute
    1.5e-11   44.4   0.0    7.4e-11   42.2   0.0    2.2  2  ArgoL2    Argonaute linker 2 domain


Domain annotation for each model (and alignments):
>> Piwi  Piwi domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  323.2   0.0  5.2e-100   1.6e-96       2     297 ..     504     797 ..     503     801 .. 0.96

  Alignments for each domain:
  == domain 1  score: 323.2 bits;  conditional E-value: 5.2e-100
                 EEEEECSSGHHCHHHHHHHHHHTCCCCEEEEEHHHHCTCCHHHHHHHHHHHHHHHHTT-BS.-EEESSSTTSSE....EEEEEEEEEECCCSCCCEEEE CS
        Piwi   2 ilvilpekkkdkyheikkyletdlgiisqcillktilkrqlkkqtltnvllkinvKlGgkn.vliveikleldvsptliiGidishgtagtvdnpsvaa 99 
                 +++i+++++ ++y++ik++++t lgi+sqc l+ +i+    k+q+++n+ +kin+KlGg n vl  ++++  +  ptliiG+d++h+  g  + +s+a+
  EPX71823.1 504 LFFIVERNSPEPYGSIKRICNTTLGIPSQCALSHHIQAA--KPQYCANLGMKINAKLGGVNtVLQAKSNPLGN-IPTLIIGADVYHPGVGA-SGVSIAS 598
                 67899999999*************************999..89******************777777776433.7****************.******* PP

                 EEEEEETSSEEEEEEEEESSCCCCHHHHHHHHHHHHHHHHHHTTTT-TTSEEEEEESS....S..S-HHHHHHHHHHHHHHHHHCTTTEEEEEEEECSC CS
        Piwi 100 vvasldkensrylaevstqassqelleklkeiikellrefkksskkkkperiivyRdGvseGqfkqvlnsEvkelkealkklkeqyqpkltvivvqkrh 198
                 +v s++ e+s+y+a ++   ++qe+++++k+ +  llr+f+ s+    p+rii++RdG+seGqfk v+++E+ e+k+a ++l+++y+pk+t +++qkrh
  EPX71823.1 599 LVGSINLEGSKYTAVSRAIPRHQEVIDSMKDLVGYLLRGFRASTGA-IPQRIIYFRDGTSEGQFKFVIEQELGEIKAATHELSPKYNPKVTICTTQKRH 696
                 ******************************************9998.**************************************************** PP

                 S--EEESESTC..CCEETTTCEEETTEEEEEEEECCEEECCCCEEEEEEEEEEEEEEES..S-CCHHHHHHHHHCTGGTTTTSS-SS-HHHHHHHHHHH CS
        Piwi 199 htrfFasdkae..ksqnippGtvvdkkitlpeekdfylcshaglqgtvkPtkytvlvdeaklsadelqsltyklchmyqrstrsvsiPapvyyAhklAk 295
                 h+rfF ++k++  k+ n++pGt+++  +t+p e+dfyl+sh +lqg + P++ytvl+de+++++d++q l+y+lc++y+rst+svs+++pvyyAh++++
  EPX71823.1 697 HARFFIKNKQDgdKNGNPLPGTLIERNVTHPFEYDFYLISHPTLQGVSAPVHYTVLHDEIRMPPDQFQALCYNLCYVYARSTTSVSLVPPVYYAHLVSN 795
                 **********999999*********************************************************************************98 PP

                 HH CS
        Piwi 296 rv 297
                 + 
  EPX71823.1 796 LS 797
                 76 PP

>> ArgoMid  Mid domain of argonaute
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.1   0.0   1.6e-25   4.7e-22       2      83 ..     409     491 ..     408     492 .. 0.97

  Alignments for each domain:
  == domain 1  score: 78.1 bits;  conditional E-value: 1.6e-25
     ArgoMid   2 prnGsWdmrgkqFlepk.akikkWAilcfasqrkvkenkledfikqlvkiskdvgisleekpeirkyadderevetlfkdlkk 83 
                 p+ GsW++rgk+F++p+ +++k+WA++cf+s+rk+++  +++f+k++v+ ++ +gi++++k++ ++yad + ++ + +k l++
  EPX71823.1 409 PSGGSWNLRGKRFFKPAsRPVKSWAVMCFTSSRKLPTVVIDNFLKTYVQSLTGLGIQFSQKNPPIMYADMRANITDSVKGLYR 491
                 99**************999*********************************************************9999987 PP

>> ArgoL1  Argonaute linker 1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.3   0.9   1.1e-22   3.3e-19       3      52 .]     164     210 ..     162     210 .. 0.93

  Alignments for each domain:
  == domain 1  score: 68.3 bits;  conditional E-value: 1.1e-22
      ArgoL1   3 grsFfsppskqrvdLggggleawrGfyqSvRptqggLllNvDvsntaFyk 52 
                  rsFfs +   ++ L g+g+eaw+Gfyq +Rptqg++++NvDvs++aF++
  EPX71823.1 164 MRSFFSGE--FTFAL-GNGIEAWKGFYQTIRPTQGQMSVNVDVSSSAFWR 210
                 69****88..6899*.88*******************************6 PP

>> PAZ  PAZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.7   0.2   2.9e-22   8.7e-19      11     137 .]     226     346 ..     215     346 .. 0.89

  Alignments for each domain:
  == domain 1  score: 67.7 bits;  conditional E-value: 2.9e-22
                 --HH-SS----HHCCCCTTBEEEETTTTS-.......CEEEEEEEESS--TTSEECCTTCT....CECCHHHHCCT---ST-TT--EEEEEES-SS--- CS
         PAZ  11 vekeeerkdrkkaaealkgliVmtwynnrn.......ktyyvadittdlapsstFpdkdke..neitfaeYfkkkYnieikdqdqplldvdkktesehs 100
                   +++ r d++   + ++ l+V+++++n n       k+y ++++++++a++s F+++ ++  ++i++ +Yf++++n++++  ++p++ v++       
  EPX71823.1 226 DVQSLGRVDFQTLSKRFRLLKVTCKHKN-NlgtplskKVYSIQGFSSKPASKSNFTRNVNGksETISVSKYFHEHHNVRLQYPNLPCVIVKN------- 316
                 45678899******************88.34556777*********************8545799***************999*********....... PP

                 -EEEEE-CCCCEEESSBCCCCCTCCCHHHHCCCH... CS
         PAZ 101 sqkqiLvpElcdihpisasqrykkkllpsilqrlnll 137
                     +L++Elc++    ++qry++kl  +  q+++++
  EPX71823.1 317 --GAMLPVELCYV---EKGQRYTAKL--NADQTAKMI 346
                 ..89*********...**********..999999986 PP

>> ArgoN  N-terminal domain of argonaute
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.2   0.0   6.1e-21   1.8e-17       1     138 []      23     152 ..      23     152 .. 0.79

  Alignments for each domain:
  == domain 1  score: 64.2 bits;  conditional E-value: 6.1e-21
       ArgoN   1 rpiklraNyFkvtslpdktlyhYdveitkkakrvglrriielll..ee.ykkselagkkpayDgrknlysakkLpkefe.dl.paaeesakkepsekrr 94 
                 rp++l+aN+Fk+t+lp++++ +Y+v i++   r+  r++i++++  +e ++k   + ++++yDg+++l+++    ++f  ++              + +
  EPX71823.1  23 RPVNLKANFFKITALPNHNINQYHVIIGDG-SRLT-RALINKIWnsKElKQKLGSSWQSCVYDGKSLLWTKDDV-EDFFiSVnI------------GNE 106
                 79**********************988633.3555.89999999753333333333678***************.555555532............223 PP

       ArgoN  95 rksrtfkvtikfaksinlqsLleylrgkq..deasleaiqaLdivl 138
                 ++++   + i+++++inlq L e++++k   d+++l  +++Ld++l
  EPX71823.1 107 KREQLIDFGIQKTTTINLQTLTEFVNSKYavDSHVLSGVMFLDLLL 152
                 34559********99**********98889*************987 PP

>> ArgoL2  Argonaute linker 2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.2   0.0   2.5e-14   7.4e-11       1      47 []     355     401 ..     355     401 .. 0.97
   2 ?   -1.6   0.0       1.2   3.5e+03      10      30 ..     524     556 ..     517     558 .. 0.62

  Alignments for each domain:
  == domain 1  score: 42.2 bits;  conditional E-value: 2.5e-14
      ArgoL2   1 eRkksIlegvkvlgydddpylrafGisidpqmttVpGRvLppPtlkY 47 
                 eR + I+  +++l +++dpyl ++G++i ++mt V+GR+L+ P++ Y
  EPX71823.1 355 ERVQQIQGFIRQLAWEKDPYLAEYGMKIASSMTDVSGRILNTPSICY 401
                 8999****************************************987 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.2
      ArgoL2  10 vkvlgy.ddd...........pylrafGisidp 30 
                  ++lg  +++            y  + G++i+ 
  EPX71823.1 524 NTTLGIpSQCalshhiqaakpQYCANLGMKINA 556
                 555555444555566666665677999***985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (837 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       508  (0.028334); expected 358.6 (0.02)
Passed bias filter:                      468  (0.026103); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.65u 0.29s 00:00:00.94 Elapsed: 00:00:00.44
# Mc/sec: 5778.10
//
Query:       EPX71824.1  [L=480]
Description: YTH family protein Mmi1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-15   57.3   0.0    1.1e-14   54.7   0.0    2.1  1  YTH       YT521-B-like domain


Domain annotation for each model (and alignments):
>> YTH  YT521-B-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.7   0.0   6.1e-19   1.1e-14       1     164 [.     341     467 ..     341     469 .. 0.93

  Alignments for each domain:
  == domain 1  score: 54.7 bits;  conditional E-value: 6.1e-19
                 EEEEEEEESHHHHHHHHHHHCEEEEEHHHHHHHHHHHHCS.EEEEEEEETTTSEEEEEEEEE......SEEBTTS-................GGCC--T CS
         YTH   1 kryFilKslseedlekSvetgvWatqkhnekkLdqafrtsekVyLiFsvnksgeFfGyArmasssssssavelassaseesasesidasaeessfweae 99 
                 +ryFi+ + +e +++++ +t++Wa+++   ++ ++a++++ ++y+iF ++ +++ +GyA+++      s+++ a+                  +fw+++
  EPX71824.1 341 SRYFIMLCDNETAISHAKKTSIWAVKHDAASRVSDAYKNA-SIYFIFIAKPTNNALGYAQVV------SDLNSAEL-----------------PFWADN 415
                 59**************************************.*********************......88888887.................9**844 PP

                 TEE...........EEEEEEEEEEEEEEGHHCCCHCHCCCTT.BGCG--TTEEE-HHHHHHHHHH CS
         YTH 100 skkeeaseeskswgkpFkveWistkrlpfsrtrhlrnpwnenreVkvsrdgtelepsvGrqLlel 164
                            ++ +  +v+Wi+t++l   +++++   +n+      +rdg+e+ ++ G +L+ l
  EPX71824.1 416 A----------TYAGGVRVKWIKTCNLFSAEISDIVGRMNHGA---TARDGMEMMYDEGCRLCIL 467
                 3..........47999************************875...68**************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (480 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       332  (0.0185175); expected 358.6 (0.02)
Passed bias filter:                      243  (0.0135535); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 3408.42
//
Query:       EPX71825.1  [L=330]
Description: short chain dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.7e-32  110.8   0.0    2.8e-26   92.2   0.0    2.1  2  adh_short      short chain dehydrogenase
    5.8e-21   75.1   0.0    1.5e-15   57.4   0.0    2.1  2  adh_short_C2   Enoyl-(Acyl carrier protein) reductase
      3e-06   27.3   0.0    5.5e-06   26.4   0.0    1.4  1  KR             KR domain
     0.0081   15.6   0.0     0.0098   15.3   0.0    1.2  1  GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
     0.0099   15.3   0.0      0.032   13.6   0.0    1.7  1  DUF1776        Fungal family of unknown function (DUF1776)
  ------ inclusion threshold ------
      0.014   14.9   0.1      0.025   14.1   0.1    1.4  1  Epimerase      NAD dependent epimerase/dehydratase family
       0.11   12.1   0.0       0.19   11.3   0.0    1.3  1  ApbA           Ketopantoate reductase PanE/ApbA
       0.18   11.1   0.0        1.8    7.8   0.0    2.3  3  THF_DHG_CYH_C  Tetrahydrofolate dehydrogenase/cyclohydrolase,


Domain annotation for each model (and alignments):
>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.2   0.0   1.2e-29   2.8e-26       1     139 [.      31     175 ..      31     184 .. 0.92
   2 !   16.6   0.0   1.9e-06    0.0041     146     189 ..     198     241 ..     193     244 .. 0.93

  Alignments for each domain:
  == domain 1  score: 92.2 bits;  conditional E-value: 1.2e-29
                 SEEEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHT..TSEEEEEE-TTTSHHHHHHHHHHHHHHHSSESEEEE---SS--SSGGGCS CS
   adh_short   1 kvvlvtGassGIGraiakelakeGakvvvvdrseekleevakelkee..gakalaiqvDvtdreevealvekavkklgkldvLvnNAGitgsgpfsels 97 
                 kv++vtG s+GIG+ +a elak+Gakv++++rseek  +++k+++ee   a ++++++D+ d e+v ++ e   +k  +ld+L+nNAGi  +    +l+
  EPX71825.1  31 KVAVVTGSSGGIGYVTALELAKKGAKVYLAGRSEEKYVTAIKNIREEwkDAYVVYLHMDLLDFESVYRAAEVFLAKETRLDILINNAGI--MFGKYQLT 127
                 89*********************************************9777799***********************************..56677888 PP

                 HHHHHHHHHHHTHHHHHHHHHHHHHHH......HCTTEEEEEEEEGGG CS
   adh_short  98 eeewervievNltgvflltravlpaml......kqssGrIvnvsSvag 139
                 ++ +er i++N+ +++l t +++pa+       +    rIvnvsS+a 
  EPX71825.1 128 KDGYERQIQTNYLSPYLFTYLLIPALRraaeysRPGDVRIVNVSSIAY 175
                 889**********************99888876666779******985 PP

  == domain 2  score: 16.6 bits;  conditional E-value: 1.9e-06
                 BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHHHHH CS
   adh_short 146 vaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdmake 189
                 ++ Y+ sK a +  +++la+ l+++gi  ++++PG+v+T++ ++
  EPX71825.1 198 QTRYGQSKYANILHSQALANRLEKYGIYSVSLHPGIVKTNLFAN 241
                 678*************************************9876 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.4   0.0   6.6e-19   1.5e-15       3     133 ..      39     176 ..      37     186 .. 0.88
   2 !   15.7   0.0   3.8e-06    0.0086     138     202 ..     198     259 ..     190     276 .. 0.88

  Alignments for each domain:
  == domain 1  score: 57.4 bits;  conditional E-value: 6.6e-19
                   TTSHHHHHHHHHHHTT-EEEEEESSGGH.HHHHHHHHHHTTSE.E..EE--TTSHHHHHHHHHHHHHHHSSEEEEEE-----EGCSS-GGGH-HHHH CS
  adh_short_C2   3 asgIGraiAkalaeeGaevvltdlneea.kkrveelaeelgae.v..lecDVtdeeqvealveevvekfgklDilvnnagiapklkgpfletsreef 95 
                     gIG+ +A +la++Ga+v l+ ++ee+   +++++ ee + + v  l++D  d e+v +++e   +k  +lDil+nnagi+        +++++++
    EPX71825.1  39 SGGIGYVTALELAKKGAKVYLAGRSEEKyVTAIKNIREEWKDAyVvyLHMDLLDFESVYRAAEVFLAKETRLDILINNAGIMFG----KYQLTKDGY 131
                   579*************************99***********886469***********************************98....4689***** PP

                   HHHHHHHTHHHHHHHHHHHHHCTSC........CEEEEEEEGGGTS CS
  adh_short_C2  96 draldvnlyslfllakaalplmkeg........gsivnlssvgaer 133
                   +r +++n  s +l++  ++p++++          +ivn+ss++  +
    EPX71825.1 132 ERQIQTNYLSPYLFTYLLIPALRRAaeysrpgdVRIVNVSSIA-YM 176
                   *****************9997766556777766789****994.34 PP

  == domain 2  score: 15.7 bits;  conditional E-value: 3.8e-06
                   TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCTGGGGSTTHHHHHHHHHHHSTTSS-B CS
  adh_short_C2 138 ynaygaaKaalealtrylAvelgpkgiRvNavspgpikTlaasgikgfdelleelearaplgrlg 202
                   ++ yg +K a +  +++lA+ l ++gi   + +pg++kT++ ++++    l++++ +++p++r++
    EPX71825.1 198 QTRYGQSKYANILHSQALANRLEKYGIYSVSLHPGIVKTNLFANVP---GLMQKILRMYPINRAV 259
                   558**************************************99997...7889999999999965 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   0.0   2.5e-09   5.5e-06       4      92 ..      34     120 ..      32     137 .. 0.87

  Alignments for each domain:
  == domain 1  score: 26.4 bits;  conditional E-value: 2.5e-09
                 EEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHT..T-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE----- CS
          KR   4 litGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaeleal..gaevevvaaDvsdkdavealleeikaeeppikGvihaAgvl 92 
                 ++tG  Gg+G ++a  la+kga+ + l +Rs+   e+  + i+++++   +a v ++++D+ d ++v ++ e + a+e ++   i+ Ag++
  EPX71825.1  34 VVTGSSGGIGYVTALELAKKGAK-VYLAGRSE---EKYVTAIKNIREEwkDAYVVYLHMDLLDFESVYRAAEVFLAKETRLDILINNAGIM 120
                 89*******************96.89*****3...3444478888775559**********************************999987 PP

>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   4.4e-06    0.0098       2      70 ..      35      99 ..      34     171 .. 0.88

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 4.4e-06
                   EETTTSHHHHHHHHHHHHCT-CCEEEEEEESS-TTHHHHHCTTT...TTGCCEEEEE--TT-HHHHHHH CS
  GDP_Man_Dehyd  2 iTGiaGfiGsylaelLlekgyevhgivrrsssfntgriehlakdpkeeleenlklhkgDltDssslerl 70
                   +TG +G iG  +a  L +kg +v+    rs++ +++ i++++++ k   +  +   ++Dl D +s+ r+
     EPX71825.1 35 VTGSSGGIGYVTALELAKKGAKVYL-AGRSEEKYVTAIKNIREEWK---DAYVVYLHMDLLDFESVYRA 99
                   9**********************86.678888899*****987543...457888999****9999875 PP

>> DUF1776  Fungal family of unknown function (DUF1776)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.0   1.4e-05     0.032      20     164 ..      46     181 ..      31     184 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.4e-05
     DUF1776  20 ialDLerrGFiVfvtvesaeeeklvesedredIrplsvdddpssieasleefaqslesphvalpgakphvlrLkgvilvPslsyptgpietiplsswas 118
                  al+L ++G  V++  +s+e++ +  +    +Ir+ + d      +  l +f +        +  ak+   rL   il+ +    +g   +++++ ++ 
  EPX71825.1  46 TALELAKKGAKVYLAGRSEEKYVTAIK----NIREEWKDAYVVYLHMDLLDFESVYRAAE--VFLAKET--RLD--ILINNAGIMFG-KYQLTKDGYER 133
                 577888888888888777775554444....47777777655566777777777777543..3334443..333..66777777777.56899****** PP

     DUF1776 119 elnerllspiltlqallplltsra..kqkakiivvnpsissslnlpfh 164
                 +++++ lsp+l++  l+p l+ +a  ++   + +vn s ++ + +p++
  EPX71825.1 134 QIQTNYLSPYLFTYLLIPALRRAAeySRPGDVRIVNVSSIAYMFAPYS 181
                 *********************877776677777888888887777776 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.1   1.1e-05     0.025       2     155 ..      34     214 ..      33     234 .. 0.64

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 1.1e-05
                 EEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC........EEEE--TT-HH....HHHHHHHHH.T-SEEEE--S..---HHHHHHSHH CS
   Epimerase   2 lVtGatGfiGsalvkallekgyevigldrlssasntarledl........elveldltdrs....alerlfkee.qpdavihlAa..vggvaassedpa 85 
                 +VtG +G iG  ++ +l++kg +v    r +++  ta ++             ++dl+d +    a e ++++e + d+ i+ A+   g ++ + +  +
  EPX71825.1  34 VVTGSSGGIGYVTALELAKKGAKVYLAGRSEEKYVTAIKNIReewkdayvVYLHMDLLDFEsvyrAAEVFLAKEtRLDILINNAGimFGKYQLTKDGYE 132
                 8********************8876666665544444333335599**998888999998844444444555556999999999954455555555566 PP

                 HHHHHHTH....HHHHHHHHHHHH.......TCTEEEEEEE.GGGGTSCSSS.SBSTCSTTS--...--SSHHHHHHHHHHHHHHH CS
   Epimerase  86 dfieknlq....gtlnlleaarka.......gvkrllflsS.sevYGkdaeq.pkeettltgpl...kpnspYaaaKlageklvea 155
                 + i++n       t+ l+ a+r+a       +v r++++sS + ++ +   +   + ++   p+     ++ Y+ +K+a     +a
  EPX71825.1 133 RQIQTNYLspylFTYLLIPALRRAaeysrpgDV-RIVNVSSiAYMFAPYSGIyFPDINL---PYvfgGEQTRYGQSKYANILHSQA 214
                 677777541111566666666655433322233.8888888777888777752223333...445577888888888776655554 PP

>> ApbA  Ketopantoate reductase PanE/ApbA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   8.7e-05      0.19       6      38 ..      39      69 ..      34      85 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 8.7e-05
                -SHHHHHHHHHHHHHTHCEEEE-SCHHHHHHHH CS
        ApbA  6 aGaiGsllaakLakagadvtlilrsrrlealkk 38
                +G+iG + a +Lak+ga+v+l +rs+  e+ ++
  EPX71825.1 39 SGGIGYVTALELAKKGAKVYLAGRSE--EKYVT 69
                6***********************99..44444 PP

>> THF_DHG_CYH_C  Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.0   0.00082       1.8      33      70 ..      27      64 ..      22      84 .. 0.85
   2 ?   -2.7   0.0       1.5   3.3e+03      58      84 ..      78     104 ..      75     113 .. 0.85
   3 ?   -0.2   0.0      0.24   5.4e+02     114     138 ..     158     182 ..     152     183 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.00082
                   --TT-EEEEE---TTTHHHHHHHHHCTT-EEEEE-TTS CS
  THF_DHG_CYH_C 33 elegkkvvvvGrsnivgkplallLleknatVtvchskt 70
                   +l+gk +vv G s  +g   al L++k+a V ++ ++ 
     EPX71825.1 27 NLHGKVAVVTGSSGGIGYVTALELAKKGAKVYLAGRSE 64
                   689***************************99886655 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1.5
                    CTT-EEEEE-TTSCCHHHHHCCSSEEE CS
  THF_DHG_CYH_C  58 eknatVtvchsktkdlaeitreadivv 84 
                    +k+a V ++h    d +++ r a++  
     EPX71825.1  78 WKDAYVVYLHMDLLDFESVYRAAEVFL 104
                    578999999999999999999999865 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.24
                    TTEEE-SB-HHHHCTTSSEE--TTT CS
  THF_DHG_CYH_C 114 kgklvGDvdfeevkevasaitPvpg 138
                    +++  GDv++ +v+++a + +P  g
     EPX71825.1 158 EYSRPGDVRIVNVSSIAYMFAPYSG 182
                    55667*************9999765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       555  (0.0309554); expected 358.6 (0.02)
Passed bias filter:                      488  (0.0272185); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 2280.54
//
Query:       EPX71826.1  [L=873]
Description: microtubule-associated protein Dis1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     0.0018   18.3   0.3        8.7    6.9   0.0    4.4  4  HEAT            HEAT repeat
  ------ inclusion threshold ------
       0.01   14.8   6.4      0.015   14.3   6.4    1.1  1  DUF812          Protein of unknown function (DUF812)
      0.023   14.8   0.1       0.95    9.6   0.0    3.0  2  TAN             Telomere-length maintenance and DNA damage re
      0.028   13.6   0.7          2    7.6   0.4    2.3  2  GLE1            GLE1-like protein
       0.19   12.4   3.7       0.64   10.7   2.4    2.5  2  AKNA            AT-hook-containing transcription factor
       0.26   11.9   4.4       0.88   10.2   4.4    1.9  1  SlyX            SlyX
       0.61   10.6   9.6        1.3    9.6   9.6    1.6  1  APG6_N          Apg6 coiled-coil region
        1.4    8.2  10.4        2.8    7.2  10.4    1.4  1  FAM76           FAM76 protein
        8.5    6.6   6.5       0.91    9.7   1.1    2.2  2  NYD-SP28_assoc  Sperm tail C-terminal domain


Domain annotation for each model (and alignments):
>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0     0.028        55       6      29 ..      54      78 ..      51      80 .. 0.83
   2 ?    1.6   0.0      0.22   4.4e+02       3      29 ..     309     335 ..     307     336 .. 0.89
   3 ?   -3.6   0.0         9   1.8e+04       2      16 ..     348     362 ..     347     372 .. 0.73
   4 !    6.9   0.0    0.0043       8.7       3      29 ..     467     493 ..     465     495 .. 0.89

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.028
                HHH.HT-SSHHHHHHHHHHHHHHHH CS
        HEAT  6 lkl.lsDpspeVReaAakaLgalae 29
                +k  l+D++ +  e A+k L+a+ e
  EPX71826.1 54 WKRgLCDSNVSTQECALKVLCAFFE 78
                44449****************9987 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.22
                 HHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   3 PlllkllsDpspeVReaAakaLgalae 29 
                 P + ++ls+p ++ R+ A+ +L ++++
  EPX71826.1 309 PEFYNALSSPKWKDRKEALDSLLEVCK 335
                 789999***************999998 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 9
                 HHHHHHHHT-SSHHH CS
        HEAT   2 lPlllkllsDpspeV 16 
                 + ++ k l+D +  V
  EPX71826.1 348 FRIVAKSLRDANVVV 362
                 567889999998777 PP

  == domain 4  score: 6.9 bits;  conditional E-value: 0.0043
                 HHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   3 PlllkllsDpspeVReaAakaLgalae 29 
                 + +l l +D+   VR a+ + L++l++
  EPX71826.1 467 NRCLVLVNDTFEPVRTATTEVLATLMQ 493
                 6788999*****************987 PP

>> DUF812  Protein of unknown function (DUF812)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   6.4   7.4e-06     0.015     178     377 ..     570     777 ..     522     786 .. 0.66

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 7.4e-06
      DUF812 178 kenskelkefykellplvtaqlssraslvpslleenaaelaaeqeweeeaneqglasrlteeeykkrk......keklqkrlaeqlrkaalkseeaess 270
                 +e ++   +  k+l  ++ +q ++++   +sl    +  l    ++ +e+++  l ++++++ +  +       k++++++++ + +++ +++++ +  
  EPX71826.1 570 EESPSRRSSPVKSLSSSLRSQAMNHRISNSSLKPAPRPALIGSMKQTNEVSTPTLTKKVETNRLSTKThpslltKSTIKEHVSPTSKQGGVSTSNLVTI 668
                 333333333334455556666666666666665433333333334444444444433333333333323344458888888888888888888888766 PP

      DUF812 271 asksksdlael..lsefseksetdslktkgsrfthaeklqftkeelakkaeteeelkkkreeeleelqeqieeleskieeleeeikklessikqveeel 367
                 + ++k++l+ l   +++++ ++t++ ++++  f++ ++lq+t++el+++ ++ + + ++++ +l++lqe++++l+++++e+  e+++ ++   + +  +
  EPX71826.1 669 TLSEKIELDLLreEKAIRQVQQTEDALERERLFREINDLQITNAELREHLDNYQGMVNQKDSKLASLQEEVNRLSNRLQEVLLELEHRQDIADENSMDI 767
                 666777666541145567888888899999999**********99999999999999999999*************99999999998888777777777 PP

      DUF812 368 eeekeeneel 377
                 + ++ e + +
  EPX71826.1 768 DSKEMESAIK 777
                 6666655544 PP

>> TAN  Telomere-length maintenance and DNA damage repair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.1      0.14   2.8e+02       3      32 ..       9      38 ..       8     158 .. 0.82
   2 ?    9.6   0.0   0.00048      0.95       5      48 ..     312     348 ..     308     359 .. 0.77

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.14
         TAN  3 ealrlLssskikeRnkaldeLkhllsskrn 32
                ++l+++s +  k+R  a +eL  ++s+ ++
  EPX71826.1  9 RILNQISEKAWKNRLTAYEELLAVFSRASD 38
                689999999999999999999999998876 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00048
         TAN   5 lrlLssskikeRnkaldeLkhllsskrnktslsdlkdkawheif 48 
                 +++Lss k k+R++ald+L ++ +++ +       ++ +++e+f
  EPX71826.1 312 YNALSSPKWKDRKEALDSLLEVCKYPCY-------QEGDYDELF 348
                 689****************999999854.......444455555 PP

>> GLE1  GLE1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0     0.015        30     208     239 ..     472     503 ..     446     517 .. 0.86
   2 ?    7.6   0.4     0.001         2      10      57 ..     704     754 ..     696     777 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.015
        GLE1 208 ilnlpleplsnitatllaafLevagnrllkaY 239
                 ++n   ep++ +t  +la++++++g+++l+ Y
  EPX71826.1 472 LVNDTFEPVRTATTEVLATLMQMFGQAILSKY 503
                 678889***********************999 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.001
        GLE1  10 lleqvkedkelkkllgdlkrkInpkvgQltnsseqlkkitkelkell...e 57 
                 + +   +++el++ l +++  +n k + l++ +e++++++++l+e+l   e
  EPX71826.1 704 INDLQITNAELREHLDNYQGMVNQKDSKLASLQEEVNRLSNRLQEVLlelE 754
                 44444469**************************************94322 PP

>> AKNA  AT-hook-containing transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   2.4   0.00032      0.64      19      77 ..     679     733 ..     669     757 .. 0.81
   2 ?    0.3   0.3      0.58   1.2e+03      42      77 ..     733     768 ..     725     786 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00032
        AKNA  19 lrsetlaqklssskgqpgkfdpsreleaeIyqlgqrleeLkdqtdqlkqkveefskdia 77 
                 lr+e+ +++ + +   ++ ++ +r l+ eI  l++   eL+++ d+ +  v++  +++a
  EPX71826.1 679 LREEKAIRQVQQT---EDALERER-LFREINDLQITNAELREHLDNYQGMVNQKDSKLA 733
                 7899999999999...78877777.***********************99998766653 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.58
        AKNA  42 releaeIyqlgqrleeLkdqtdqlkqkveefskdia 77 
                  +l +e+ +l  rl+e     ++ +    e s di 
  EPX71826.1 733 ASLQEEVNRLSNRLQEVLLELEHRQDIADENSMDID 768
                 458888999999999988888888888888888883 PP

>> SlyX  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   4.4   0.00044      0.88       4      55 ..     703     754 ..     701     764 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00044
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-XXXXXXXX CS
        SlyX   4 rleeLEiklafqedtieeLndvvaeqqqqidrlqrqlrllaerlkeleessg 55 
                  +++L+i  a + + ++  + +v + + +++ lq+++++l +rl+e+  + +
  EPX71826.1 703 EINDLQITNAELREHLDNYQGMVNQKDSKLASLQEEVNRLSNRLQEVLLELE 754
                 599*****************************************99866655 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   9.6   0.00064       1.3      60     128 ..     678     748 ..     645     782 .. 0.86

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00064
      APG6_N  60 ekeeeelleeLkelek..ereeleaelaaleeelealeeeeerfwreynelqlelleleeeldsleaqyeh 128
                    ee+++++ +++e+  ere+l +e+++l+ + ++l e  +++    n+++ +l++l+ee + l ++++ 
  EPX71826.1 678 LLREEKAIRQVQQTEDalERERLFREINDLQITNAELREHLDNYQGMVNQKDSKLASLQEEVNRLSNRLQE 748
                 45677788888888865578999999999999999999999999999999999999999999999999876 PP

>> FAM76  FAM76 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2  10.4    0.0014       2.8     151     283 ..     632     774 ..     606     784 .. 0.54

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0014
       FAM76 151 kkkskskkskkskekskekkaskkkskkhkkrss.......rlevskle......eeklaeekesnetskk..sldsnssdhlvavtqLkeeiaslkkq 234
                 + ++k++ s   k+  ke+ + ++k+  +++++        +             eek+ ++ +++e++ +   l  + +d  ++ ++L+e++ + + +
  EPX71826.1 632 RLSTKTHPSLLTKSTIKEHVSPTSKQGGVSTSNLvtitlseK------IeldllrEEKAIRQVQQTEDALEreRLFREINDLQITNAELREHLDNYQGM 724
                 222222222111111111111111111111111122222222......1333443444444444444433345888999******************** PP

       FAM76 235 leqkdqellekdkkitelkaellekekelreklkel.ekeakekieklek 283
                 ++qkd++l + + ++  l   l+e   el+++     e++++   +++e+
  EPX71826.1 725 VNQKDSKLASLQEEVNRLSNRLQEVLLELEHRQDIAdENSMDIDSKEMES 774
                 ******************99999988888777553303334444444554 PP

>> NYD-SP28_assoc  Sperm tail C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   1.1   0.00046      0.91      34      59 ..     696     721 ..     694     722 .. 0.95
   2 ?   -2.4   0.4       2.6   5.3e+03      43      60 .]     733     750 ..     728     750 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00046
  NYD-SP28_assoc  34 eRaklieetesLekqNeeLrnlLkqy 59 
                     eR+ l +e+  L+  N+eLr+ L +y
      EPX71826.1 696 ERERLFREINDLQITNAELREHLDNY 721
                     8**********************998 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 2.6
  NYD-SP28_assoc  43 esLekqNeeLrnlLkqyl 60 
                      sL+++ + L n+L++ l
      EPX71826.1 733 ASLQEEVNRLSNRLQEVL 750
                     689999999***999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (873 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1103  (0.0615204); expected 358.6 (0.02)
Passed bias filter:                      536  (0.0298957); expected 358.6 (0.02)
Passed Vit filter:                        89  (0.00496402); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.82u 0.30s 00:00:01.11 Elapsed: 00:00:00.47
# Mc/sec: 5525.91
//
Query:       EPX71827.1  [L=361]
Description: protein kinase inhibitor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.3e-114  380.9   0.2   4.3e-114  380.5   0.2    1.2  1  Pil1      Eisosome component PIL1
  ------ inclusion threshold ------
      0.065   13.4   0.6       0.15   12.2   0.6    1.6  1  DUF3958   Protein of unknown function (DUF3958)


Domain annotation for each model (and alignments):
>> Pil1  Eisosome component PIL1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  380.5   0.2  4.9e-118  4.3e-114       1     264 [.       1     262 [.       1     263 [. 0.99

  Alignments for each domain:
  == domain 1  score: 380.5 bits;  conditional E-value: 4.9e-118
        Pil1   1 mnraysirsskastasesqteaspksstkskrlfslkslrsslrkqaaasfsPelarrLakLikseknlvraheaaarerksiakqlseWGedtdddvs 99 
                 m+r+ys+r+ +a+tas+  ++++p ss++s+r f  + +r+s+r ++a +fsP+la+rLa L+k+ekn+++++ +++r r+++a+qls+WGed+ddd+s
  EPX71827.1   1 MQRSYSLRNARAPTASQLVNPPPPVSSARSGRSF--APFRHSMRIHQAVNFSPDLAKRLAVLVKMEKNIMTSMVQVTRGRRDAARQLSYWGEDCDDDIS 97 
                 89****************************9977..699************************************************************ PP

        Pil1 100 DvsDklgvllselgeledayadrldqsRatlKsirniEasvqpsRdkkekladeiaklkakepqserlvvlEqeLvraeaeslvaeaqlsnitReklke 198
                 Dv+Dklgvl++e++ele+ ++dr+dq+R+tlKsirniEasvqpsR+kk+kl d+i++lk+k+p+s+rlv++EqeLvr+ea++lvaeaqlsn+tRek+k+
  EPX71827.1  98 DVTDKLGVLFYEVAELENYLIDRHDQYRVTLKSIRNIEASVQPSREKKQKLLDQIYMLKHKDPESPRLVTMEQELVREEAACLVAEAQLSNTTREKFKQ 196
                 *************************************************************************************************** PP

        Pil1 199 aytaefdaliEraeKlallarygkrLlellddspvtpGetrpaYdgaeatrqiladaedaLrewrl 264
                 a+ +++dal+E+aeKl l+++yg++Ll+l+dd+pvtpGe+rpaYdg+e++rqi++dae++L++w +
  EPX71827.1 197 AMVYNLDALHEHAEKLGLISTYGRHLLNLIDDTPVTPGEARPAYDGYETSRQIVMDAEQSLSNWVP 262
                 ****************************************************************87 PP

>> DUF3958  Protein of unknown function (DUF3958)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.6   1.7e-05      0.15      10      72 ..     114     176 ..     109     194 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.7e-05
     DUF3958  10 lrelaekqeenekelkkqeqlkeeyeehfnqskrlfdelletfrkdeeshlfeklrdevqrls 72 
                 + +l +  ++ +  lk +++++++++   +++++l+d++    +kd es  + ++++e++r++
  EPX71827.1 114 ENYLIDRHDQYRVTLKSIRNIEASVQPSREKKQKLLDQIYMLKHKDPESPRLVTMEQELVREE 176
                 56778888899999*********************************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (361 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       733  (0.0408835); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.28s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 2512.83
//
Query:       EPX71828.1  [L=770]
Description: DUF1769 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-17   63.9   0.1    2.5e-17   62.8   0.1    1.6  1  DUF1769   Protein of unknown function (DUF1769)


Domain annotation for each model (and alignments):
>> DUF1769  Protein of unknown function (DUF1769)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.8   0.1   1.4e-21   2.5e-17       1      55 []      82     136 ..      82     136 .. 0.97

  Alignments for each domain:
  == domain 1  score: 62.8 bits;  conditional E-value: 1.4e-21
     DUF1769   1 GddllfGndfdrpirdrlPpgf.saalkfakfiDpglegDlyadkPylyspllssm 55 
                 G++++fG++fd++i++ +P  + +a++++ak+iDp++++D  a++Py++sp+++++
  EPX71828.1  82 GNQVIFGTQFDHMIST-FPESAfRAGMRIAKYIDPAVYYDKFAKSPYIMSPFVACV 136
                 89************96.***999*******************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (770 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       797  (0.0444531); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.29s 00:00:00.96 Elapsed: 00:00:00.46
# Mc/sec: 5029.68
//
Query:       EPX71829.1  [L=513]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-31  107.8   3.6    4.5e-31  106.8   3.6    1.6  1  DUF2456   Protein of unknown function (DUF2456)


Domain annotation for each model (and alignments):
>> DUF2456  Protein of unknown function (DUF2456)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.8   3.6   2.5e-35   4.5e-31       6      95 .]     161     250 ..     156     250 .. 0.96

  Alignments for each domain:
  == domain 1  score: 106.8 bits;  conditional E-value: 2.5e-35
     DUF2456   6 lkrqliryenksilvnfiewlvskairglllsviiflvlWpvtigilagigkklgsdyyfnntwapqviKlvygvvlglitnPiiailal 95 
                 + r++++y++++i++++iew+ ++ +rgl++sv+++++lWp++igil++ g++ g+dy +nn++apq+iKl++g vlg++ +P+ia+l++
  EPX71829.1 161 ILRAKPKYNFHFIVFRWIEWMAFTGLRGLFWSVPLWFLLWPASIGILTAPGQHSGNDYFYNNYPAPQIIKLIFGGVLGFVFTPWIAFLHM 250
                 67999***********************************************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (513 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       581  (0.0324056); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.28s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 3490.03
//
Query:       EPX71830.1  [L=344]
Description: steroid oxidoreductase superfamily protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      5e-59  199.7   9.1    6.4e-59  199.3   9.1    1.1  1  DUF1295   Protein of unknown function (DUF1295)
  ------ inclusion threshold ------
       0.11   12.9   0.0       0.11   12.9   0.0    2.9  2  ICMT      Isoprenylcysteine carboxyl methyltransferase (ICMT)


Domain annotation for each model (and alignments):
>> DUF1295  Protein of unknown function (DUF1295)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  199.3   9.1   7.1e-63   6.4e-59       1     235 []      67     320 ..      67     320 .. 0.95

  Alignments for each domain:
  == domain 1  score: 199.3 bits;  conditional E-value: 7.1e-63
     DUF1295   1 lflislltkssslvDvlwgvlfvilavltlll..sea.aklrrllvllLvvlWglRLalhllrr.tlkkg.eDkryeelrkelgktiallsllv.vfvl 93 
                 l+++s+ t++ s+vD++w++l+++++v++l++    + a++r +++++L++lW++RL+++++r+  +k+g eD+r++ +r++++  +++++++  ++++
  EPX71830.1  67 LWAVSVQTGNMSQVDRAWPILPAAFSVHFLIYgtLFNiASRRLMIMVFLQLLWSVRLTYNYYRKgGYKRGsEDYRWVTVRHNMPPYLYPIFHFLyIHII 165
                 6*******************************87556699999*********************99******************99998887777**** PP

     DUF1295  94 QavllylvalpvllaaaskeeqalkaldviglalwlvgivlealaDqQlsaf.................kkdpankgk.vldsGLwrysRHPNYfgeal 174
                 Q+++ly +a p+++a++++++++++ ld+++l+l+++ +v+e++aDqQ+++f                   ++   +k ++++GL+++sRHPN+++e++
  EPX71830.1 166 QTLHLYWLACPTYIAMVAGNARSFGLLDCVALELFMFTFVVEIIADQQQWDFyqarelynnneeipghlNFELMTLAKgFNTNGLFKWSRHPNFLAEQV 264
                 *******************************************************************997788888888******************** PP

     DUF1295 175 iWwglflialealeglealaiagpllltlllvfvsgipllEkkalkkykdkeeyreYqkkt 235
                 iW+ ++ +++ a++++ +++i+gpl   l+ vf+++++l+E  ++kky   + y  Y +k+
  EPX71830.1 265 IWFVFYFFGALASKTWINWTILGPL--GLVGVFQASTRLTEMISVKKY---PLYSLYSQKV 320
                 ***********************97..789***********9999999...7999998775 PP

>> ICMT  Isoprenylcysteine carboxyl methyltransferase (ICMT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   4.9      0.59   5.3e+03      11      51 ..     107     154 ..      95     198 .. 0.64
   2 ?   12.9   0.0   1.2e-05      0.11      35      51 ..     245     261 ..     234     295 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.59
        ICMT  11 lrlvvmatlGeiwttrvai...lpdhklvksglyky..lrH..PnYll 51 
                  rl+ m+ l   w++r++    +++     s  y++  +rH  P Yl 
  EPX71830.1 107 RRLMIMVFLQLLWSVRLTYnyyRKGGYKRGSEDYRWvtVRHnmPPYLY 154
                 478899999999999998877666666666666666225777777754 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 1.2e-05
        ICMT  35 lvksglykylrHPnYll 51 
                  +++gl+k+ rHPn+l+
  EPX71830.1 245 FNTNGLFKWSRHPNFLA 261
                 5789***********87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (344 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       460  (0.0256568); expected 358.6 (0.02)
Passed bias filter:                      217  (0.0121033); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2590.09
//
Query:       EPX71831.1  [L=419]
Description: Set1C PHD Finger protein Spf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      8e-12   44.9   5.8      8e-12   44.9   5.8    2.2  2  PHD              PHD-finger
  ------ inclusion threshold ------
      0.013   15.3   6.6      0.013   15.3   6.6    3.0  4  zf-CpG_bind_C    CpG binding protein zinc finger C terminal d
       0.23   10.8   3.4       0.37   10.1   0.2    2.2  2  Methyltrans_RNA  RNA methyltransferase


Domain annotation for each model (and alignments):
>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.9   5.8   1.3e-15     8e-12       1      51 [.     111     158 ..     111     159 .. 0.90
   2 ?   -3.1   1.4       1.3   7.8e+03      38      47 ..     179     188 ..     169     189 .. 0.56

  Alignments for each domain:
  == domain 1  score: 44.9 bits;  conditional E-value: 1.3e-15
                 SBTTTTSTTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSSTBSSTTTHT CS
         PHD   1 rCavCkkksdeeeelvqCdgCkrwfHqkClkppleseekpegewlCekCke 51 
                 +C +Ck+  d+++ ++ CdgC++wfH +C+++p++  ++ + +++C++C+ 
  EPX71831.1 111 YC-LCKG-PDDGRWMLGCDGCEDWFHGECVNIPESY-DELTVQYFCPSCTA 158
                 69.****.9************************885.55566*******86 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 1.3
                 SHHSSTBSST CS
         PHD  38 ekpegewlCe 47 
                  + +++++C 
  EPX71831.1 179 AEASSKYCCH 188
                 3344578886 PP

>> zf-CpG_bind_C  CpG binding protein zinc finger C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.29   1.7e+03      23      71 ..      43      92 ..      24     116 .. 0.61
   2 ?   -2.3   1.3      0.53   3.2e+03      78     117 ..     145     187 ..     138     191 .. 0.69
   3 ?   -0.4   0.2      0.13   7.9e+02      27      73 ..     245     290 ..     236     301 .. 0.65
   4 ?   15.3   6.6   2.2e-06     0.013     159     229 ..     294     392 ..     280     396 .. 0.74

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.29
  zf-CpG_bind_C 23 aeeenkkklekirkeq.eeakkklkelekklkkLeeliekakklslkeee 71
                   +e+  + + +k+++e+ ++ +++ +e +++l+kL + i k++  +++++ 
     EPX71831.1 43 VEDGLTPESSKVKQEEpKSPESSSTETDTELQKLGSTIPKKQAGTVTRKG 92
                   45555555666666551445667788899999999999888877776655 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.53
  zf-CpG_bind_C  78 edselsvaCvtCgheislkkalk...HmekCfakyEsqtsfgs 117
                    ++ +++++C +C+++ +  +a +    +  C + +E  + ++ 
     EPX71831.1 145 DELTVQYFCPSCTASGHGVTAWRrkcRLRECSKPAEASSKYCC 187
                    5667899999998877766666644456677777777777765 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.13
  zf-CpG_bind_C  27 nkkklekirkeqeeakkklkelekklkkLeeliekakklslkeeeee 73 
                    ++++le+i++  +++++k++  ++k++ L +l+++a ++ ++e +e+
     EPX71831.1 245 ERTNLESIEQSLSTMHEKVRFAQEKKHFL-QLVKDASRTLVQEFKEK 290
                    45667777777777777776666665555.46677766666666654 PP

  == domain 4  score: 15.3 bits;  conditional E-value: 2.2e-06
  zf-CpG_bind_C 159 etevCGcpl...........................vanvfektgef.CrvkkkkCskHykweklrraeidlervrqllkldelleeerrirtale 226
                    ++++CG+                             + + ++ t +  C  +k++C kH +w+ +    i+ e+  ++ kl+++ + ++r+ ++ +
     EPX71831.1 294 KKDICGFDNrllmndkdlknlwqsispeapiteleqMLEQMQCTSDCiCLQEKRRCLKHANWQIIFSEDINQEEKGLMHKLEQMETAKQRLIDHQK 389
                    566666666666666665555555555555555433334456666666*************************************99999999988 PP

  zf-CpG_bind_C 227 nra 229
                    +ra
     EPX71831.1 390 ERA 392
                    886 PP

>> Methyltrans_RNA  RNA methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.2   6.1e-05      0.37     116     167 ..     246     297 ..     239     338 .. 0.79
   2 ?    1.1   0.5     0.034     2e+02     102     159 ..     343     398 ..     333     415 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 6.1e-05
                      HHHHHHHHHHT-SS--EEEEEEEHHHHHHHCSCCEEEEEEETTSSEBGGGSS CS
  Methyltrans_RNA 116 kilieAaeQsgrtrlpevkepislkelleelkeadlklildeeekksleels 167
                      +   e++eQs  t+  +v+++++ k++l+ +k+a++ l+ + +ek+ l++  
       EPX71831.1 246 RTNLESIEQSLSTMHEKVRFAQEKKHFLQLVKDASRTLVQEFKEKEGLKKDI 297
                      566899******************************9999888888776654 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.034
                      ..HHHHHHHHHHHHHHHHHHHHHHT-SS--EEEEEEEHHHHHHHCSCCEEEEEEETTS CS
  Methyltrans_RNA 102 ldekkkdkklerwqkilieAaeQsgrtrlpevkepislkelleelkeadlklildeee 159
                      l+ek+   k   wq i  e + Q ++  + +++++++ k+ l +++++++  ild e+
       EPX71831.1 343 LQEKRRCLKHANWQIIFSEDINQEEKGLMHKLEQMETAKQRLIDHQKERA--ILDVEH 398
                      57889999999*************************99999988888754..555543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (419 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1442  (0.0804284); expected 358.6 (0.02)
Passed bias filter:                      596  (0.0332422); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.23s 00:00:00.77 Elapsed: 00:00:00.40
# Mc/sec: 3180.67
//
Query:       EPX71832.1  [L=347]
Description: vacuolar SNARE Vam7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-13   49.4   0.0    1.1e-12   47.9   0.0    1.7  1  PX        PX domain


Domain annotation for each model (and alignments):
>> PX  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.9   0.0   6.3e-17   1.1e-12       7     111 ..       7     110 ..       2     112 .. 0.84

  Alignments for each domain:
  == domain 1  score: 47.9 bits;  conditional E-value: 6.3e-17
                 EEEEEEEETTSSEEEEEEEEEETTS.SSEEEEEEEHHHHHHHHHHHHHHHTTSTSTSSSTSGSSSSSCTTSHHHHHHHHHHHHHHHHHHHTSCHHHHSH CS
          PX   7 svleretsgskkhsyylyevelktg.akewtvkRrYsdFeeLhskLlrkfprvkiPplPkkvlfgsvrkkdeefiekrrkgLeeyLqrllnhpelrnse 104
                 ++ +  +++++ +++++y++e+      ++ v Rr+s+F++L +k++ + ++  +P lP+k++f+s +  +e f e+rr +L+ y++  ln + +++  
  EPX71832.1   7 KIPKTSQKQDEGSRWTIYHIEVCFPnNLRRIVFRRFSEFVSLDEKIRPFDDMGALPNLPSKSWFQS-TVTNEGFRESRRVALQGYIKA-LNKSPWIEMG 103
                 4555555567777777777776544469*************************************8.999****************95.6666799999 PP

                 HHHHHHH CS
          PX 105 vlteFLe 111
                 ++++FL+
  EPX71832.1 104 EVKSFLN 110
                 9999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (347 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       823  (0.0459033); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 2361.27
//
Query:       EPX71833.1  [L=255]
Description: bouquet formation protein Bqt3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       748  (0.0417201); expected 358.6 (0.02)
Passed bias filter:                      272  (0.015171); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 1725.62
//
Query:       EPX71834.1  [L=64]
Description: ubiquinol-cytochrome-c reductase complex subunit 9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-22   79.6   3.7    1.3e-22   79.5   3.7    1.0  1  UCR_UQCRX_QCR9  Ubiquinol-cytochrome C reductase, UQCRX/QCR9 


Domain annotation for each model (and alignments):
>> UCR_UQCRX_QCR9  Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.5   3.7   7.3e-27   1.3e-22       1      52 [.       4      55 ..       4      56 .. 0.97

  Alignments for each domain:
  == domain 1  score: 79.5 bits;  conditional E-value: 7.3e-27
                    HHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSHHHHTGG CS
  UCR_UQCRX_QCR9  1 stlYntlfrrnstfvltifagAfvferafDsatdkiWdsiNkGKlWkDIkhk 52
                    st+Yn++fr+ns f +tifa+Af+++++fD ++dk+W+s N G +WkD+k +
      EPX71834.1  4 STIYNIFFRKNSSFYATIFASAFFTKIGFDIFADKVWESANAGMQWKDVKPR 55
                    69***********************************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       493  (0.0274974); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.26s 00:00:00.63 Elapsed: 00:00:00.42
# Mc/sec: 453.52
//
Query:       EPX71835.1  [L=898]
Description: MCM complex subunit Mcm3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.2e-95  318.0   0.2      4e-95  317.2   0.2    1.4  1  MCM              MCM P-loop domain
    2.7e-33  114.5   0.0    4.9e-33  113.7   0.0    1.4  1  MCM_OB           MCM OB domain
    3.3e-23   81.9   1.1      1e-22   80.3   1.1    1.9  1  MCM_lid          MCM AAA-lid domain
    1.4e-13   51.3   0.4    4.7e-13   49.6   0.2    2.0  2  MCM_N            MCM N-terminal domain
    9.9e-08   31.6   0.2    2.2e-06   27.2   0.0    2.6  3  Mg_chelatase     Magnesium chelatase, subunit ChlI
     0.0065   16.3   0.0      0.014   15.3   0.0    1.6  1  AAA_3            ATPase family associated with various cellul
  ------ inclusion threshold ------
      0.015   15.0   0.0      0.055   13.2   0.0    1.9  1  Sigma54_activat  Sigma-54 interaction domain
      0.053   13.6   0.1       0.17   11.9   0.1    1.9  1  RcpC             Flp pilus assembly protein RcpC/CpaB


Domain annotation for each model (and alignments):
>> MCM  MCM P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  317.2   0.2   1.8e-98     4e-95       2     224 .]     294     516 ..     293     516 .. 0.99

  Alignments for each domain:
  == domain 1  score: 317.2 bits;  conditional E-value: 1.8e-98
                 HHHHHHHHTSSTHHHHHHHHSSTTSSS-HHHHHHHHHHHH---EBBBSSSSBBCSS-EEEEEESSTSTHHHHHHHHHHHSSSEEEEESSSSSSSHSSSE CS
         MCM   2 veeikelakekdiieklvksiapsiyghedvkkaillqlfggvkkkledktklrgdinvllvgdpgtaKsqlLkyveklapravytsgkgssaagLtaa 100
                 +++i++la++k+ +e l++s+apsiyg e++k+aill+l+gg++k+l+++t++rgdin+l+vgdp+taKsqlL++v ++ap a+ t+g+gss++gLtaa
  EPX71835.1 294 IRNINKLARKKNAFELLSTSLAPSIYGFEHIKQAILLLLLGGTEKNLSNGTHIRGDINILMVGDPSTAKSQLLRFVLNTAPLAIATTGRGSSGVGLTAA 392
                 789************************************************************************************************ PP

                 EEEESSSSSEEEEETHHHHTTTSEEEEESGGGSTCHHHHHHHHHHHHSEEEEESSSCEEEEE--EEEEEEE--SSSSCCTTS-HHHHSSSSHHHHHHSS CS
         MCM 101 vvrdeetgefvleaGalvladkGvcciDefdkmkeedrsalhEamEqqtisiaKaGivatLnartsvlaAanpkagrydkkksvaeninlsaalLsrFD 199
                 v+ d+etge  leaGa+vlad+Gv+ciDefdkm++ dr+a+hE+mEqqt++iaKaGi+++Lnar+sv+aAanp++g+yd +k  ++ni l++++LsrFD
  EPX71835.1 393 VTSDRETGERRLEAGAMVLADRGVVCIDEFDKMSDIDRVAIHEVMEQQTVTIAKAGIHTSLNARCSVVAAANPIYGQYDIRKDPTKNIALPDSMLSRFD 491
                 *************************************************************************************************** PP

                 EEEEE-SSTTHHHHHHHHHHHHHHH CS
         MCM 200 lifvllDkvdeekDeelaehivslh 224
                 l+f++ D++d++kD++l+eh++++h
  EPX71835.1 492 LLFIVTDDIDDKKDRALSEHVLRMH 516
                 **********************998 PP

>> MCM_OB  MCM OB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.7   0.0   2.2e-36   4.9e-33       3     125 ..     118     249 ..     114     250 .. 0.88

  Alignments for each domain:
  == domain 1  score: 113.7 bits;  conditional E-value: 2.2e-36
                 GG--GGGTTSEEEEEEEEEEE---EEEEEEEEEEETTT-.-EEES---..............-SB-..TTT-HHH-EEE-GGGSEEEEEEEEEEE---- CS
      MCM_OB   3 RdlrsehigklvkveGivtrasevkpklkkavfeckkcgktvevelee..............PrkCeekeCeskdpfkletekskfvdfqklklQEspe 87 
                 R+lr+ h++k++++eGivtr+s v+pk+ k+ ++c+++++++  ++ +              P++   +  es +p+++e   s+f+d+q+++lQE+pe
  EPX71835.1 118 RTLRALHLNKMISLEGIVTRCSFVRPKVIKSIHYCEATKRHHFKQYADstmngglsfqstvyPTQ---D--ESGNPLSIEFGYSTFRDHQTISLQEMPE 211
                 9**************************************85554444466677888877888883...2..33469999999***************** PP

                 ---------EEEEEEEGGGTT---TT-EEEEEEEEEEE CS
      MCM_OB  88 evpaGelPrslevileddlvdkvkPGdrvevtGiyral 125
                 ++p+G+lPrs++++l+ddlvd+vkPGdrv+++G yr++
  EPX71835.1 212 RAPPGQLPRSIDILLDDDLVDTVKPGDRVHIVGQYRSM 249
                 ***********************************975 PP

>> MCM_lid  MCM AAA-lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.3   1.1   4.6e-26     1e-22       2      84 ..     584     667 ..     583     670 .. 0.94

  Alignments for each domain:
  == domain 1  score: 80.3 bits;  conditional E-value: 4.6e-26
                 HHHHHHHHHHHTT--BETCHHHHHHHHHHHHHHHHH.TSSTSSSST--HHHHHHHHHHHHHHHHHHTSSSE-HHHHHHHHHHHH CS
     MCM_lid   2 llrkYiayarekikPklseeakeklseaYvelRkee.edskrksipitvRqLesliRLseAlAklrlsevvteedveeairllk 84 
                 ++rkYi+ya+++i+P+l+++ +e+++++Y+ lR+++ ++++r++ p t+R+Le+liRLs+A+Ak rls+ v+ +d++ a ++l+
  EPX71835.1 584 FVRKYIQYAKSRINPVLNQATAEYITNIYCGLRNDDlQGNQRRTSPLTARTLETLIRLSTAHAKARLSNAVEVRDAKAAEKILR 667
                 78*********************************9755699*************************************99987 PP

>> MCM_N  MCM N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.6   0.2   2.1e-16   4.7e-13       3     103 ..      16     107 ..      14     108 .. 0.89
   2 ?   -2.7   0.0       4.1   9.1e+03      61      81 ..     593     613 ..     585     637 .. 0.73

  Alignments for each domain:
  == domain 1  score: 49.6 bits;  conditional E-value: 2.1e-16
       MCM_N   3 kFedFLeefkddsededgekkYrdqlqemaerekttLevdlddLaafdeeLaeailenpkeylplleealkevvkklepsykddakefpaeltrrfqvr 101
                  F+++Le+     +d+ + + Y++ + +m+++ +++L v++d L+++++eLa+ +l +p e+++ ++eal+ vv +l +   ++     +++++ f++ 
  EPX71835.1  16 IFQEYLEHD----SDDTNATLYHEAILRMLNMAQRRLIVNIDELRDYNKELADGVLYQPMEFVEPFNEALQGVVSTLIDPIVHK-----DIKDKPFYIG 105
                 699999977....688999*******************************************************9976654444.....6899999998 PP

       MCM_N 102 fk 103
                 f+
  EPX71835.1 106 FR 107
                 86 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 4.1
       MCM_N  61 pkeylplleealkevvkklep 81 
                   ++ p+l++a+ e++ +++ 
  EPX71835.1 593 KSRINPVLNQATAEYITNIYC 613
                 568889999999999988765 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       1.2   2.7e+03     110     131 ..      50      72 ..      44      75 .. 0.83
   2 ?    0.9   0.0      0.11   2.4e+02      20      41 ..     347     368 ..     339     378 .. 0.85
   3 !   27.2   0.0   9.7e-10   2.2e-06      93     160 ..     400     467 ..     394     490 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1.2
  Mg_chelatase 110 LfLDElpefkrkvle.vLRePle 131
                   + +DEl +++++  + vL +P+e
    EPX71835.1  50 VNIDELRDYNKELADgVLYQPME 72 
                   568********998857999999 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.11
  Mg_chelatase  20 aGgHnlllvGppGsGKtmlakr 41 
                    G  n+l+vG p + K+ l + 
    EPX71835.1 347 RGDINILMVGDPSTAKSQLLRF 368
                   5888*************98765 PP

  == domain 3  score: 27.2 bits;  conditional E-value: 9.7e-10
  Mg_chelatase  93 ggskpkpGeislahnGvLfLDElpefkrkvlevLRePledgevtisrakakvefparfqlvaamNpcp 160
                   g ++ + G++ la +Gv+ +DE+ +++     ++ e +e+++vti++a  +++  ar+ +vaa+Np  
    EPX71835.1 400 GERRLEAGAMVLADRGVVCIDEFDKMSDIDRVAIHEVMEQQTVTIAKAGIHTSLNARCSVVAAANPIY 467
                   5668899********************99999**********************************75 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   6.1e-06     0.014      48     114 ..     396     467 ..     352     492 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 6.1e-06
       AAA_3  48 eekekefefkkGpvf.an..llladeinrappktqsalleameerqvtvege..thklpepflvlatqnPie 114
                 ++++ e ++++G+++ a+  ++  de ++ +   + a+ e+me+++vt++++   ++l+    v+a+ nPi 
  EPX71835.1 396 DRETGERRLEAGAMVlADrgVVCIDEFDKMSDIDRVAIHEVMEQQTVTIAKAgiHTSLNARCSVVAAANPIY 467
                 55666777777775523244999*************************9875226789************94 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   2.5e-05     0.055      79     142 ..     399     464 ..     397     472 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.5e-05
                      TTTSS-BEHHHHHTTTSEEEEETGGGS-HHHHHHHHHHHHHSEE..ESBTSSSEEE--EEEEEEES CS
  Sigma54_activat  79 tGAekekkGlfekadgGtlfLDeigelplelQekLlrvlqegev..ervGsskeikvdvriiaatn 142
                      tG ++ ++G++  ad G++ +De  +++    + + +v+++++v   + G +++ ++ + ++aa+n
       EPX71835.1 399 TGERRLEAGAMVLADRGVVCIDEFDKMSDIDRVAIHEVMEQQTVtiAKAGIHTSLNARCSVVAAAN 464
                      67778889*******************************9997522699***************97 PP

>> RcpC  Flp pilus assembly protein RcpC/CpaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   7.6e-05      0.17       7      67 ..     213     276 ..     207     306 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 7.6e-05
        RcpC   7 lppgkrAvaievdevtgvaglirpGdrVDVllt...esekedsesektvaelllqnvrVLavgq 67 
                  ppg+   +i++  +  +   ++pGdrV ++       +k+++++++t  ++ll+n  VL +++
  EPX71835.1 213 APPGQLPRSIDILLDDDLVDTVKPGDRVHIVGQyrsMGSKNSGSTNATFRTVLLANNVVLLTNK 276
                 57888888999999999999*************9964444455555555566778888887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (898 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       779  (0.0434492); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.71u 0.30s 00:00:01.01 Elapsed: 00:00:00.44
# Mc/sec: 6108.24
//
Query:       EPX71836.1  [L=614]
Description: meiotically upregulated Mug174 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        3.8    6.2  10.4        6.2    5.5  10.4    1.5  1  Presenilin  Presenilin
        4.8    6.5  20.7       0.53    9.7  16.2    1.7  2  SDA1        SDA1
        9.8    4.9  11.1         15    4.2  11.1    1.4  1  ALMT        Aluminium activated malate transporter


Domain annotation for each model (and alignments):
>> Presenilin  Presenilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5  10.4     0.001       6.2     231     296 ..     227     297 ..     155     397 .. 0.60

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.001
  Presenilin 231 evaeseeeeeaekkkeeasesskeeeseeesseksaqsse.................seeeseeesseaessaeesseekese 296
                 + ++s +++++e++++ +s+s++e++s            +                 s+ee+++ess+++s++++ss++++++
  EPX71836.1 227 KSGNSVKSSSSESSESDDSSSESESSS------------AvsvsvssdaasvsttasSSEEDSSESSDSSSDDSTSSSDSSTS 297
                 111111111111111111111111111............11222222222222222211111122222222222222211111 PP

>> SDA1  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7  16.2   8.8e-05      0.53      75     181 ..     216     320 ..     184     388 .. 0.55
   2 ?   -2.2   0.1      0.37   2.2e+03      82     125 ..     483     506 ..     445     559 .. 0.53

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 8.8e-05
        SDA1  75 Llekwkeeekkekreeeeedsddeddeedwevesdddseedseggwidvesdeeeieesdesedeeeeeeeeeekeekeeeeeeeeeeeeeeeeeeeee 173
                 Ll ++++++  ++   ++ +s++   +e++e +++++++e+s+   ++v+sd ++++  ++s++e+++e++++++++ ++++++   +++  + ++++ 
  EPX71836.1 216 LLTTANQQRPMKSG--NSVKSSS---SESSESDDSSSESESSSAVSVSVSSDAASVSTTASSSEEDSSESSDSSSDDSTSSSDSS--TSDGGSLNSQQL 307
                 44443333333333..2222222...22333333222223333446889999887777664444444444333333333333322..222222222221 PP

        SDA1 174 ekekkkk.....k 181
                 ++++kk+     +
  EPX71836.1 308 KHHNKKTndipkS 320
                 1111111223330 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.37
        SDA1  82 eekkekreeeeedsddeddeedwevesdddseedseggwidves 125
                 ++++++           ++ +++ ++s          + i+ve+
  EPX71836.1 483 SDESKDL----------SEGQSSHLDS----------DTIKVEH 506
                 3332222..........1111222222..........2222222 PP

>> ALMT  Aluminium activated malate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2  11.1    0.0025        15     322     448 ..     191     335 ..     109     344 .. 0.69

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.0025
        ALMT 322 klskveellkevkvaaeeLqskldskskLlvnsekweaakkkekaeeveekkeeekeseskkeea..................eaveeaeseseksllk 402
                 k+sk  +++++ +  ++ L+++++s  +Ll+ +++++ +k+ ++ ++++++++e+++s+s++e++                  +++ee +ses++s++ 
  EPX71836.1 191 KKSK-VDHSANGEFTVNPLKKNVES--QLLTTANQQRPMKSGNSVKSSSSESSESDDSSSESESSsavsvsvssdaasvsttaSSSEEDSSESSDSSSD 286
                 4455.489999999*******9955..568888887777766666665555555555555544446788888888877665542222222222222222 PP

        ALMT 403 eskrs..lklskkesapaee.sleekqlskeeelkelelaealslatfa 448
                 +s++s  +++s   s ++++ + ++k+++ + + ++  ++++l+ a+ +
  EPX71836.1 287 DSTSSsdSSTSDGGSLNSQQlKHHNKKTNDIPKSNTSGFSHSLNTANEM 335
                 2222200222223334444445555666666666666666666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (614 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1547  (0.0862848); expected 358.6 (0.02)
Passed bias filter:                      484  (0.0269954); expected 358.6 (0.02)
Passed Vit filter:                       105  (0.00585643); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.82u 0.32s 00:00:01.13 Elapsed: 00:00:00.48
# Mc/sec: 3846.20
//
Query:       EPX71837.1  [L=176]
Description: centrin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.5e-27   94.3  12.5    3.3e-13   49.9   1.0    2.1  2  EF-hand_7     EF-hand domain pair
    6.3e-26   88.0  17.5    1.6e-07   30.4   0.1    4.2  4  EF-hand_1     EF hand
    1.3e-22   77.7  11.6      2e-08   33.5   0.2    4.4  4  EF-hand_6     EF-hand domain
    8.2e-14   51.2  12.5    3.4e-07   30.0   1.1    3.7  4  EF-hand_8     EF-hand domain pair
    1.5e-11   43.3  12.6     0.0016   17.8   1.5    4.5  4  EF-hand_5     EF hand
    3.7e-09   36.8   0.8     0.0002   21.6   0.1    2.2  2  EF-hand_9     EF-hand domain
    4.8e-05   23.3   6.4      0.015   15.2   1.4    2.7  3  EF-hand_4     Cytoskeletal-regulatory complex EF hand
    0.00015   21.8   1.7       0.42   10.5   0.0    3.4  4  Caleosin      Caleosin related protein
     0.0036   18.1   2.3        1.2   10.1   0.4    2.2  2  EF-hand_11    EF-hand domain
     0.0055   17.0   3.7        1.4    9.2   1.0    2.2  2  SPARC_Ca_bdg  Secreted protein acidic and rich in cysteine Ca
     0.0067   16.7   3.3       0.84   10.0   0.5    2.4  2  EF-hand_14    EF-hand domain
  ------ inclusion threshold ------
      0.022   14.9   0.8      0.088   13.0   0.3    2.0  2  Dockerin_1    Dockerin type I domain


Domain annotation for each model (and alignments):
>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.9   1.0   2.2e-16   3.3e-13       2      70 ..      37      99 ..      36     100 .. 0.96
   2 !   49.7   4.4   2.5e-16   3.7e-13       2      70 ..     110     172 ..     109     173 .. 0.97

  Alignments for each domain:
  == domain 1  score: 49.9 bits;  conditional E-value: 2.2e-16
   EF-hand_7  2 eklkeaFkelDtdgdgyldkeellrllrkifqgagegsklsdeelellfkefDtdkdGvisfdEFlkly 70
                ++++eaFk++D+d+d+ +d+ el+ ++r        g++  + e+ +++++fD+++ G++ +++F++ +
  EPX71837.1 37 QDIHEAFKLFDSDKDNAIDYHELRAAMR------ALGFNAEKAEVLKILRDFDKTGKGYLQMEDFVRVM 99
                79**************************......99***99*************************988 PP

  == domain 2  score: 49.7 bits;  conditional E-value: 2.5e-16
   EF-hand_7   2 eklkeaFkelDtdgdgyldkeellrllrkifqgagegsklsdeelellfkefDtdkdGvisfdEFlkly 70 
                 e++k+aF+++D d +g+++ + l+r+ +      + +++++d+ele++++efD+d+dG+i+ +EF  ++
  EPX71837.1 110 EEIKRAFELFDDDETGKISIRNLRRVAK------ELNENIDDQELEAMIEEFDLDQDGEINEQEFISIM 172
                 79**************************......********************************998 PP

>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   0.1     1e-10   1.6e-07       1      29 []      38      66 ..      38      66 .. 0.94
   2 !   18.0   0.2   9.6e-07    0.0014       1      28 [.      74     101 ..      74     102 .. 0.93
   3 !   19.8   0.1   2.5e-07   0.00037       1      28 [.     111     138 ..     111     139 .. 0.92
   4 !   29.2   2.9   2.6e-10   3.8e-07       1      27 [.     147     173 ..     147     175 .. 0.95

  Alignments for each domain:
  == domain 1  score: 30.4 bits;  conditional E-value: 1e-10
                HHHHHHHHHTTTSSSEEEHHHHHHHHHHH CS
   EF-hand_1  1 elkeiFrefDkDgdGkIdfeEfkellkkl 29
                ++ e+F++fD D+d  Id+ E+++++++l
  EPX71837.1 38 DIHEAFKLFDSDKDNAIDYHELRAAMRAL 66
                589***********************985 PP

  == domain 2  score: 18.0 bits;  conditional E-value: 9.6e-07
                 HHHHHHHHHTTTSSSEEEHHHHHHHHHH CS
   EF-hand_1   1 elkeiFrefDkDgdGkIdfeEfkellkk 28 
                 e+ +i r+fDk g G++  e+f++++++
  EPX71837.1  74 EVLKILRDFDKTGKGYLQMEDFVRVMTE 101
                 6789**********************85 PP

  == domain 3  score: 19.8 bits;  conditional E-value: 2.5e-07
                 HHHHHHHHHTTTSSSEEEHHHHHHHHHH CS
   EF-hand_1   1 elkeiFrefDkDgdGkIdfeEfkellkk 28 
                 e+k++F++fD D +GkI++  ++++ k+
  EPX71837.1 111 EIKRAFELFDDDETGKISIRNLRRVAKE 138
                 79*****************999998776 PP

  == domain 4  score: 29.2 bits;  conditional E-value: 2.6e-10
                 HHHHHHHHHTTTSSSEEEHHHHHHHHH CS
   EF-hand_1   1 elkeiFrefDkDgdGkIdfeEfkellk 27 
                 el+ +++efD D+dG I+ +Ef+++++
  EPX71837.1 147 ELEAMIEEFDLDQDGEINEQEFISIMM 173
                 799***********************7 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.5   0.2   1.3e-11     2e-08       2      31 .]      39      67 ..      38      67 .. 0.95
   2 !   14.8   0.1   1.4e-05      0.02       4      27 ..      77     100 ..      74     105 .. 0.88
   3 !   19.1   0.1   5.6e-07   0.00083       1      27 [.     111     137 ..     111     141 .. 0.90
   4 !   15.8   0.6   6.2e-06    0.0093       7      27 ..     153     173 ..     143     175 .. 0.88

  Alignments for each domain:
  == domain 1  score: 33.5 bits;  conditional E-value: 1.3e-11
   EF-hand_6  2 lreaFklfDkdgdGkidaeElrkalrkalg 31
                ++eaFklfD d+d+ id++Elr+a+r alg
  EPX71837.1 39 IHEAFKLFDSDKDNAIDYHELRAAMR-ALG 67
                89************************.887 PP

  == domain 2  score: 14.8 bits;  conditional E-value: 1.4e-05
   EF-hand_6   4 eaFklfDkdgdGkidaeElrkalr 27 
                 ++ + fDk+g G++ +e+++++++
  EPX71837.1  77 KILRDFDKTGKGYLQMEDFVRVMT 100
                 66788*****************98 PP

  == domain 3  score: 19.1 bits;  conditional E-value: 5.6e-07
   EF-hand_6   1 elreaFklfDkdgdGkidaeElrkalr 27 
                 e+++aF+lfD d +Gki++  lr++ +
  EPX71837.1 111 EIKRAFELFDDDETGKISIRNLRRVAK 137
                 689*****************9998866 PP

  == domain 4  score: 15.8 bits;  conditional E-value: 6.2e-06
   EF-hand_6   7 klfDkdgdGkidaeElrkalr 27 
                 ++fD d dG+i+ +E+++++ 
  EPX71837.1 153 EEFDLDQDGEINEQEFISIMM 173
                 68****************996 PP

>> EF-hand_8  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.3   7.3e-05      0.11      26      47 ..      37      58 ..      33      59 .. 0.92
   2 !   19.6   0.2     4e-07   0.00059       5      54 ..      54     101 ..      53     102 .. 0.85
   3 ?    3.0   0.0      0.06        90      29      44 ..     113     128 ..     109     129 .. 0.82
   4 !   30.0   1.1   2.3e-10   3.4e-07       1      52 [.     123     172 ..     123     175 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 7.3e-05
   EF-hand_8 26 eevdilfrefDtdgdGkisfeE 47
                +++++ f++fD d+d++i++ E
  EPX71837.1 37 QDIHEAFKLFDSDKDNAIDYHE 58
                78999**************987 PP

  == domain 2  score: 19.6 bits;  conditional E-value: 4e-07
   EF-hand_8   5 Itreelrrilrilglkkglseeevdi..lfrefDtdgdGkisfeEFcvller 54 
                 I+ +elr ++r+lg    +++e++++  ++r fD  g+G++  e+F+ ++++
  EPX71837.1  54 IDYHELRAAMRALG----FNAEKAEVlkILRDFDKTGKGYLQMEDFVRVMTE 101
                 8889******9999....66666666227******************99975 PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.06
   EF-hand_8  29 dilfrefDtdgdGkis 44 
                    f +fD d+ Gkis
  EPX71837.1 113 KRAFELFDDDETGKIS 128
                 556899*********8 PP

  == domain 4  score: 30.0 bits;  conditional E-value: 2.3e-10
   EF-hand_8   1 ekgkItreelrrilrilglkkglseeevdilfrefDtdgdGkisfeEFcvll 52 
                 e+gkI+  +lrr ++ l  +  + ++e+++++ efD+d+dG i+  EF+  +
  EPX71837.1 123 ETGKISIRNLRRVAKELNEN--IDDQELEAMIEEFDLDQDGEINEQEFISIM 172
                 689*********88888888..**************************9866 PP

>> EF-hand_5  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   1.4e-06    0.0021       3      23 ..      41      61 ..      39      63 .. 0.89
   2 !    6.8   0.1    0.0032       4.8       5      25 .]      79      99 ..      76      99 .. 0.88
   3 !    6.6   0.1    0.0039       5.8       2      19 ..     113     130 ..     112     136 .. 0.82
   4 !   17.8   1.5   1.1e-06    0.0016       1      24 [.     148     171 ..     148     173 .. 0.87

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 1.4e-06
                HHHHHH-SS-SSCE-HHHHHH CS
   EF-hand_5  3 dtFqaiDlNgDGkIskeELkt 23
                ++F+ +D ++D  I+  EL++
  EPX71837.1 41 EAFKLFDSDKDNAIDYHELRA 61
                57*****************97 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0032
                HHHH-SS-SSCE-HHHHHHHH CS
   EF-hand_5  5 FqaiDlNgDGkIskeELktlv 25
                ++ +D+ g G++ +e + +++
  EPX71837.1 79 LRDFDKTGKGYLQMEDFVRVM 99
                799**************9876 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.0039
                 HHHHHHH-SS-SSCE-HH CS
   EF-hand_5   2 kdtFqaiDlNgDGkIske 19 
                 k +F+ +D +  GkIs+ 
  EPX71837.1 113 KRAFELFDDDETGKISIR 130
                 667*************85 PP

  == domain 4  score: 17.8 bits;  conditional E-value: 1.1e-06
                 HHHHHHHH-SS-SSCE-HHHHHHH CS
   EF-hand_5   1 lkdtFqaiDlNgDGkIskeELktl 24 
                 l+++ +++Dl++DG I+ +E+  +
  EPX71837.1 148 LEAMIEEFDLDQDGEINEQEFISI 171
                 577899***************774 PP

>> EF-hand_9  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.0   3.5e-05     0.053       3      66 .]      42     103 ..      40     103 .. 0.94
   2 !   21.6   0.1   1.3e-07    0.0002       2      64 ..     114     174 ..     113     176 .] 0.90

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 3.5e-05
   EF-hand_9   3 vFevcDtqktGrVpvsrlidyLravtaqdpeeseLeelakelDPdgedasvdldtflrvmrewi 66 
                  F+++D +k   +   +l + +ra +  + e +e+ +  + +D  g+ + +++++f rvm e+i
  EPX71837.1  42 AFKLFDSDKDNAIDYHELRAAMRALGF-NAEKAEVLKILRDFDKTGK-GYLQMEDFVRVMTEKI 103
                 59*************************.8888899999*********.************9876 PP

  == domain 2  score: 21.6 bits;  conditional E-value: 1.3e-07
   EF-hand_9   2 tvFevcDtqktGrVpvsrlidyLravtaqdpeeseLeelakelDPdgedasvdldtflrvmre 64 
                 + Fe++D ++tG++ + +l  + +   + +  + eLe   +e+D d   ++++   f  +m++
  EPX71837.1 114 RAFELFDDDETGKISIRNLRRVAKELNE-NIDDQELEAMIEEFDLDQD-GEINEQEFISIMMD 174
                 78**************998888888777.88899**********9987.************97 PP

>> EF-hand_4  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.1   0.00052      0.78      42      72 ..      36      66 ..      20      82 .. 0.83
   2 ?   -0.2   0.0      0.63   9.4e+02      47      69 ..      75      99 ..      67     106 .. 0.67
   3 !   15.2   1.4     1e-05     0.015       7      69 ..     110     172 ..     102     174 .. 0.84

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00052
   EF-hand_4 42 edklekiwdladidedgkldfeefciamrli 72
                 + +++ ++l d d+d+ +d++e+  amr +
  EPX71837.1 36 RQDIHEAFKLFDSDKDNAIDYHELRAAMRAL 66
                566788899*******************954 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.63
   EF-hand_4 47 kiwdladidedgk..ldfeefciam 69
                 +  l d d+ gk  l +e+f+ +m
  EPX71837.1 75 VLKILRDFDKTGKgyLQMEDFVRVM 99
                4455677776543339999999877 PP

  == domain 3  score: 15.2 bits;  conditional E-value: 1e-05
   EF-hand_4   7 leikkyweifsglkpednkltgdkvapvlknskleedklekiwdladidedgkldfeefciam 69 
                  eik+ +e+f   +  +  + + +  +   n ++++++le + +  d+d+dg+++ +ef+ +m
  EPX71837.1 110 EEIKRAFELFDDDETGKISIRNLRRVAKELNENIDDQELEAMIEEFDLDQDGEINEQEFISIM 172
                 5899999***98888777776655555555899**************************9776 PP

>> Caleosin  Caleosin related protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.0   0.00028      0.42      10      37 ..      43      70 ..      34      77 .. 0.85
   2 !    7.1   0.0    0.0033       4.9      97     138 ..      77     118 ..      71     135 .. 0.89
   3 ?    1.7   0.1      0.14   2.1e+02      96     128 ..     113     145 ..     105     159 .. 0.69
   4 ?    1.7   0.1      0.14   2.1e+02       6      27 ..     148     169 ..     143     175 .. 0.67

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00028
    Caleosin 10 vaFfDrdkdGiiypldtyrgfralgfnv 37
                ++ fD+dkd  i  ++   ++ralgfn+
  EPX71837.1 43 FKLFDSDKDNAIDYHELRAAMRALGFNA 70
                567***********************97 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0033
    Caleosin  97 eifskyakekkdaltlkevlellkgqrealDlfgwlaallew 138
                 +i++ ++k+ k++l++++++++++++    D++  +   +e+
  EPX71837.1  77 KILRDFDKTGKGYLQMEDFVRVMTEKIVERDPLEEIKRAFEL 118
                 68999***********************99999888888775 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.14
    Caleosin  96 eeifskyakekkdaltlkevlellkgqrealDl 128
                  + f+ ++++++++++++++ ++ k+ +e +D 
  EPX71837.1 113 KRAFELFDDDETGKISIRNLRRVAKELNENIDD 145
                 456777777777888888877777776665554 PP

  == domain 4  score: 1.7 bits;  conditional E-value: 0.14
    Caleosin   6 LqqHvaFfDrdkdGiiypldty 27 
                 L+  ++ fD d+dG i  ++ +
  EPX71837.1 148 LEAMIEEFDLDQDGEINEQEFI 169
                 4455566888888888776654 PP

>> EF-hand_11  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.1    0.0028       4.2      21      88 ..      38     105 ..      26     111 .. 0.76
   2 !   10.1   0.4   0.00078       1.2      21      83 ..     111     173 ..     102     176 .] 0.92

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0028
                 HHHHHHHHH-TT-SSEE-HHHHHHHHHHHT----H.HHHHHHHHTS-B-TTS-EEHHHHHHHHCS-.-- CS
  EF-hand_11  21 aivqefenfdtlksntvsreefraictrrvqiltd.eqfdrlwselpvnakgrlkyqdflsklsierva 88 
                  i + f+ fd+ k n++  +e+ra   r +   ++  +  ++  ++    kg l+ +df+  ++ + v 
  EPX71837.1  38 DIHEAFKLFDSDKDNAIDYHELRAAM-RALGFNAEkAEVLKILRDFDKTGKGYLQMEDFVRVMTEKIVE 105
                 577889*****************975.555544431456678899999999999999999777665555 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00078
                 HHHHHHHHH-TT-SSEE-HHHHHHHHHHHT----HHHHHHHHHTS-B-TTS-EEHHHHHHHHC CS
  EF-hand_11  21 aivqefenfdtlksntvsreefraictrrvqiltdeqfdrlwselpvnakgrlkyqdflskls 83 
                  i + fe fd   +  +s  ++r + +   + + d++++ + +e+ ++  g ++ q+f+s + 
  EPX71837.1 111 EIKRAFELFDDDETGKISIRNLRRVAKELNENIDDQELEAMIEEFDLDQDGEINEQEFISIMM 173
                 57889**********************99999***************************9775 PP

>> SPARC_Ca_bdg  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.1    0.0013       1.9      47      83 ..      30      66 ..      12      98 .. 0.74
   2 !    9.2   1.0   0.00095       1.4      54     111 ..     110     169 ..      75     171 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0013
  SPARC_Ca_bdg 47 knlkeckepvawkFsklDtnsdkvlsksELaplrapl 83
                  + ++e ++ ++  F+ +D ++d+ ++ +EL++    l
    EPX71837.1 30 EITEEQRQDIHEAFKLFDSDKDNAIDYHELRAAMRAL 66
                  567788899999******************8755444 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00095
  SPARC_Ca_bdg  54 epvawkFsklDtnsdkvlsksELaplraplvkl..ehCikpflescDadkdkkislkEwc 111
                   e+++  F+ +D ++ + +s + L+ + ++l ++  ++  ++++e+ D+d+d++i+ +E++
    EPX71837.1 110 EEIKRAFELFDDDETGKISIRNLRRVAKELNENidDQELEAMIEEFDLDQDGEINEQEFI 169
                   56777899999999999999999999998877544678899*****************97 PP

>> EF-hand_14  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.1    0.0041       6.1       6      52 ..      43      89 ..      39     111 .. 0.82
   2 !   10.0   0.5   0.00056      0.84       6      57 ..     116     167 ..     110     176 .] 0.84

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0041
  EF-hand_14  6 fdlfkdeetdklsvakllkaLaetGirkdDpRLkellkklkkvekek 52
                f+lf++++++ +  ++l +a+++ G + +   + ++l+ + k  k  
  EPX71837.1 43 FKLFDSDKDNAIDYHELRAAMRALGFNAEKAEVLKILRDFDKTGKGY 89
                99************************999988888888888776654 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00056
  EF-hand_14   6 fdlfkdeetdklsvakllkaLaetGirkdDpRLkellkklkkvekekseaee 57 
                 f+lf+d+et+k+s+ +l ++ +e   + dD  L+ +++++   ++ + +++e
  EPX71837.1 116 FELFDDDETGKISIRNLRRVAKELNENIDDQELEAMIEEFDLDQDGEINEQE 167
                 9**********************9999**********999876666555444 PP

>> Dockerin_1  Dockerin type I domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0       0.7     1e+03      41      46 ..      50      55 ..      32      98 .. 0.72
   2 ?   13.0   0.3   5.9e-05     0.088       3      49 ..     120     167 ..     118     172 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.7
                -SSCES CS
  Dockerin_1 41 gDGrvn 46
                +D+ ++
  EPX71837.1 50 KDNAID 55
                333333 PP

  == domain 2  score: 13.0 bits;  conditional E-value: 5.9e-05
                 ETTSSSC-SHHHHHHHHHHCT.SSEBTTSCCCHGGGSTT-SSCESHHH CS
  Dockerin_1   3 DVNgDgkVnalDalliinyln.qregqssssngkaaDvNgDGrvnalD 49 
                 D ++ gk++   + ++ ++ln + ++q+ + + + +D+++DG++n   
  EPX71837.1 120 DDDETGKISIRNLRRVAKELNeNIDDQELEAMIEEFDLDQDGEINEQE 167
                 5567799999999********8888999999**************876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1007  (0.056166); expected 358.6 (0.02)
Passed bias filter:                      579  (0.032294); expected 358.6 (0.02)
Passed Vit filter:                        77  (0.00429472); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.48u 0.28s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 1228.21
//
Query:       EPX71838.1  [L=556]
Description: signal recognition particle subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      3e-59  201.5  14.8    1.3e-58  199.4  14.8    1.8  1  SRP68     RNA-binding signal recognition particle 68
  ------ inclusion threshold ------
      0.022   14.9   0.0      0.052   13.7   0.0    1.6  1  FLYWCH_N  FLYWCH-type zinc finger-containing protein
       0.21   12.0   1.1        3.4    8.1   0.0    2.5  2  DUF1040   Protein of unknown function (DUF1040)
          1    9.7   0.0          1    9.7   0.0    3.4  4  OmpH      Outer membrane protein (OmpH-like)


Domain annotation for each model (and alignments):
>> SRP68  RNA-binding signal recognition particle 68
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  199.4  14.8   2.9e-62   1.3e-58       8     558 ..      43     520 ..      41     521 .. 0.90

  Alignments for each domain:
  == domain 1  score: 199.4 bits;  conditional E-value: 2.9e-62
                 HHHHHHHHHHHHHHHHTT--SS----SS-TT--HHHHHH-THHHHHHHHHHHHHHHHHHHHHHHTCTTTTTS-HHHHHHHHHHHHHHHHHHHHHHHHHH CS
       SRP68   8 rYrqyltrrLrrlRkkLkfatgkrgkyakkaitaeqvatdvrylhllLltaERaWAyamalKaehsadkkgitgrkRshivsRLrKAaklAeeLvells 106
                 +Y +yl++r+++lRk L ++++ +        ++++   d+r++ ++Ll+a Ra+ +   l+++           +R+h ++RL+++++ ++eLv++++
  EPX71838.1  43 EYIRYLSQRIHSLRKALSITQKGG--------KPKTS-ADKRFAEIQLLNADRAFQQYSYLRSS-----------QRQHALRRLKRGLQASKELVSFCE 121
                 699*****************8777........45666.8***********************98...........8**********************6 PP

                 CS.-S--HHHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHH...TTTHHHHHHHTHH...HHHHHHHHHCT-SSS--HHHHHHHHHH CS
       SRP68 107 eassgadertkLEarAYaallrGallfekqqWekalesyskaraiyeaLakvt...seefkdllsetveelePsiRYcaYqlkeprtapsetiarkafe 202
                 + +   ++  +LEa A++++++G++  ek+ We++l+s+s++r  +++L +++   s+ ++ +l+e v +++ +iRY a++ + +++++s ++ + a  
  EPX71838.1 122 S-KDHSNHLFILEAAAFMKYIEGTYFYEKRLWEDSLHSFSSSRLAFQQLQRSVkelSDHQRGVLNELVGQIDSTIRYVAQRNGLENQTESLDVLMLANV 219
                 6.6999999******************************************999999****************************99999999888866 PP

                 H-.XXXXXXXXXXXXXXXXXXXXXXXX.X.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       SRP68 203 kaendllqskiekldpealkeqaaskssk.apseitWrgrevkvedakirlalaavqeakaeleeeskssakekaaaYdkvLiasqDavdatkqaidel 300
                 ++ +dl++++i+ l+p+ l+ +a++++ + +++ +tWr+++v++++ ++ lal  +++++a  +++            d++L a+ +a ++tk+ +d  
  EPX71838.1 220 SN-EDLVVQQIRFLNPQLLESNAEDQAGTsSITRVTWRDQTVQITHPEMVLALYGIHDVQASTDSS--------TTVDDRLLGAWANAEKTTKSILD-- 307
                 66.89***************99998655479*****************************999993........456699*****************.. PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       SRP68 301 ekegvaqsdkrmqslqilrtavnyeklswrieRnrvlvgeadgklaeessakskkkkkegrklakleElvrLydallqslesikelpgvaadeelaeel 399
                    g + + ++ q+l i  +++ y+++   i+R+    ++                   +++la l+    Lyd++++++e+ k+lpg+a+d+ ++ +l
  EPX71838.1 308 ---GISPESNEYQELSICYSYLAYNLIVLKIQRDIRTQEQ------PI----------VTNSLANLRAQQSLYDTIIKNIEAAKNLPGIAKDNGMMVQL 387
                 ...******************************9754211......11..........156899*********************************** PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXX....... CS
       SRP68 400 eakkayfrAlrclyiarshalaskyaeAlALlkrAlelaeealeelsksdakskpeslevlleelqeLadelkgelqrarAlveleelkkeeeslkksl 498
                 ea++a  +A rc  ia++++++ k++  lA++ rA    e+a + l++ ++      le+  + + eL+++ +  + r+  l  l +++  +       
  EPX71838.1 388 EAQIAVAKARRCQVIAEAYQSQDKAK-GLAMCIRAGHYYEQANDCLHNFEE----TPLEIAFDIVAELQTKPEDLKKRILLLRSLASMEMIN------- 474
                 *********************98865.8******************99998....6788888888888888888888888877776544333....... PP

                 ......XXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       SRP68 499 sklslsekaaakkkkkpllerLdeypssggevdlknlvelPPklepvpvKPiflDvAlNy 558
                       +k     k+  l+e++++y+++ + + l nl +l  +l+p+p KP+f+D+A  y
  EPX71838.1 475 ------QK----PKDLSLVESMNQYNTELE-KPL-NLTQL--NLRPIPAKPLFFDLAITY 520
                 ......22....35788*********9553.555.79888..8**************977 PP

>> FLYWCH_N  FLYWCH-type zinc finger-containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   1.2e-05     0.052       8      69 ..     426     487 ..     423     501 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.2e-05
    FLYWCH_N   8 eqegesvkagqePspetgtdvvpaaptkPrefsklvLltaskedgdgvdskpkevhCvlsLe 69 
                 eq ++ ++   e  +e + d+v +  tkP++  k +Ll  s  + + ++ kpk+   v s++
  EPX71838.1 426 EQANDCLHNFEETPLEIAFDIVAELQTKPEDLKKRILLLRSLASMEMINQKPKDLSLVESMN 487
                 788888888889999**************************************998887765 PP

>> DUF1040  Protein of unknown function (DUF1040)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.0   0.00075       3.4      38      72 ..     347     381 ..     328     397 .. 0.84
   2 ?    1.7   0.2     0.074   3.3e+02      16      45 ..     473     502 ..     459     505 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00075
     DUF1040  38 fegeleeltddvliyhlkmresdkeemiPGlkkdy 72 
                 ++++l++l+ +  +y+  ++++++ + +PG++kd 
  EPX71838.1 347 VTNSLANLRAQQSLYDTIIKNIEAAKNLPGIAKDN 381
                 5788999999999********************96 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.074
     DUF1040  16 eWkkekdlnllqllqklaeeagfegeleel 45 
                   +k kdl+l++ +++  +e +   +l++l
  EPX71838.1 473 INQKPKDLSLVESMNQYNTELEKPLNLTQL 502
                 568999***********9999888887776 PP

>> OmpH  Outer membrane protein (OmpH-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.7      0.27   1.2e+03      38      74 ..      75     112 ..      42     123 .. 0.51
   2 ?    9.7   0.0   0.00023         1      70     111 ..     164     204 ..     134     206 .. 0.88
   3 ?   -0.2   0.5      0.26   1.2e+03      85     113 ..     355     385 ..     300     414 .. 0.63
   4 ?   -2.6   0.1       1.4   6.2e+03      41      53 ..     449     461 ..     444     498 .. 0.42

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.27
                 HHHHHH..HHHHHHHHHTTTS.-HHHHHHHHHHHHHHHH CS
        OmpH  38 kekelq..klqeelqkkakklekeekeqelqkkeqelqq 74 
                 + +e+q  ++ +++q+++    + +++ +l+++++ lq+
  EPX71838.1  75 RFAEIQllNADRAFQQYSYL-RSSQRQHALRRLKRGLQA 112
                 33333311222233322222.155555555555555555 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00023
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT- CS
        OmpH  70 qelqqkqqqkaqelqkkqqellkpildkinkaikevakekgy 111
                  ++qq +q+  +el + q+ +l++++ +i+ +i+ va+++g+
  EPX71838.1 164 LAFQQ-LQRSVKELSDHQRGVLNELVGQIDSTIRYVAQRNGL 204
                 57899.88888****************************996 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.26
                 HHHHHHHHHHHHHHHHHH..HHHHHHTT-SE CS
        OmpH  85 kkqqellkpildkinkai..kevakekgydl 113
                 ++qq l++ i+++i++a     +ak++g  +
  EPX71838.1 355 RAQQSLYDTIIKNIEAAKnlPGIAKDNGMMV 385
                 2333566666666666532234555554444 PP

  == domain 4  score: -2.6 bits;  conditional E-value: 1.4
                 HHHHHHHHHHHHT CS
        OmpH  41 elqklqeelqkka 53 
                 elq++ e+l+k+ 
  EPX71838.1 449 ELQTKPEDLKKRI 461
                 4444444444222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (556 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       604  (0.0336884); expected 358.6 (0.02)
Passed bias filter:                      315  (0.0175693); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.43
# Mc/sec: 3875.30
//
Query:       EPX71839.1  [L=741]
Description: gamma tubulin complex subunit Alp16 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     0.0033   17.1   0.0     0.0059   16.3   0.0    1.3  1  GCP_N_terminal  Gamma tubulin complex component N-terminal


Domain annotation for each model (and alignments):
>> GCP_N_terminal  Gamma tubulin complex component N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   3.3e-07    0.0059       6     189 ..     185     362 ..     181     372 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 3.3e-07
  GCP_N_terminal   6 ylLqGisgklirfde.kddervvkdvrlpgllppslrslverllelgtlyrrlrkfveevsrsesglvlqalaaaldeelteyyrliaqlEsqll 99 
                      l+qG++  l+ +d+ + ++rv++ v+++g++  s +s v ++++ gtl+r+  k +++   s + ++l +++    + +t+y++ + +l  +++
      EPX71839.1 185 ALVQGFETCLFFWDDeNATFRVPNLVSMSGTSQLSFSSFVTEFISFGTLVRNSIKKIKN-PISIGQFYLFNFC---ANGITQYRKELQSLLLDFH 275
                     458****999966662444999999999**********************987777766.4555555655554...4556666666666666666 PP

  GCP_N_terminal 100 edsesiltLlrlevwlqetllllrvLanlveevekanlkggallsllheaaq.hgdpkvrkllsellervsrpflemlekWileGelsDpy 189
                     +        l+l  ++++   l+r+L  +++    +++    ++++l++++  +++++   ++ e +  +s pf+  l++ +   +++  +
      EPX71839.1 276 SPIR---GPLSLLNYIRRFDPLFRMLKYVLSMPP-SRQDTISIMNALYDYTIiCQNTRSYPIALECFVYCSDPFFLKLNAALDFTVTNKRI 362
                     6654...344566667777777777777777665.333479********7777**********************9999998877776555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (741 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       362  (0.0201908); expected 358.6 (0.02)
Passed bias filter:                      279  (0.0155614); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.30s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 4959.47
//
Query:       EPX71840.1  [L=275]
Description: hypothetical protein SOCG_03776 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (275 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       439  (0.0244855); expected 358.6 (0.02)
Passed bias filter:                      243  (0.0135535); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.28s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 1935.26
//
Query:       EPX71841.1  [L=547]
Description: adenylyl cyclase-associated protein Cap1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   1.9e-107  359.4   1.3   2.8e-107  358.9   1.3    1.3  1  CAP_N          Adenylate cyclase associated (CAP) N terminal
    2.3e-58  196.2   7.3    3.2e-58  195.8   7.3    1.2  1  CAP_C          Adenylate cyclase associated (CAP) C terminal
     0.0015   18.2   7.2     0.0036   17.0   7.2    1.6  1  TBCC           Tubulin binding cofactor C


Domain annotation for each model (and alignments):
>> CAP_N  Adenylate cyclase associated (CAP) N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  358.9   1.3  4.7e-111  2.8e-107       1     315 [.      15     367 ..      15     369 .. 0.83

  Alignments for each domain:
  == domain 1  score: 358.9 bits;  conditional E-value: 4.7e-111
                 XXXXXXXXXXXXXXXXX............................XXXXXXXXXXXXXXXXXXXXXXXSXH..................HHHHHHHHHH CS
       CAP_N   1 ttlikRLEaatsrLEdiais..................essssasskasssssaaaaaaaaaakaaaaaaaa.................ksveaFdeli 64 
                 tt++kRLEaatsrLEd+  s                  +     ++ ++ s++ + ++a aa +++++   +                 +s++a+de++
  EPX71841.1  15 TTILKRLEAATSRLEDLVESghqplpnlhrasrdnnsqT-----HNISAGSHNGTGNPAIAAVREHSS---PsvshrqsasnpkpescsPSIAAYDEFC 105
                 689**************888*****99998876443220.....222222222222222222222222...123356778888888999********** PP

                 HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHBE---...HHHHHHHCHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHCGGGGGGGGG-- CS
       CAP_N  65 sgsvkefvelskkiggevaeqaelvkkafeaqrkfllvaskakkPad..seelqelLkplseaiqkvqeireknrksklfnhLsavsegipalgWvave 161
                 s++++e+v+lskk+gg+v++q+e+v++af+  r +l+va kakkP +  s+e+ e+Lkp+++++ + ++ir+++r+++lfn+Ls+v+ gi++lgWv++e
  EPX71841.1 106 SKYLNEYVQLSKKLGGLVQQQSEHVENAFKLLRGILVVAMKAKKP-EyeSPEFFEFLKPIQSELLSTTNIRDEHRTDPLFNQLSTVMSGISVLGWVTIE 203
                 *********************************************.559************************************************** PP

                 S-HHHHHHHHHHHHHHHHHHHHHHHTTT-HHHHHHHHHHHHHHHHHHHHHHHHSTTS----..TTSBE................SSC--XXXXXXX... CS
       CAP_N 162 pkPapyvkemkdaaqFYtNrVlkeykekdkkhveWvksflqilkeLqaYvkeyhttGltWn..kkGkdaeealk.........aaaaaasaaaaggppp 249
                 p P+++++emkd++qFY+NrVlk++k kd+ +v Wv+s+l++l+eL +Yvk++++tGl W+  ++  +++e++k         +++ ++s++ a+g pp
  EPX71841.1 204 PAPVSFMSEMKDSSQFYANRVLKDFKGKDELQVSWVRSYLTLLTELVNYVKTHYKTGLGWSnkPDAPPLKEVIKnagekesqeESSRKSSSSGASGLPP 302
                 ************************************************************635667778888889998887533333333333445666 PP

                 .XXXXXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXX CS
       CAP_N 250 PpPpPppasvfeeesaaasasaaaggmsavFaeLnkGeaiTkgLkkVdksqkThKnPslrasstvp 315
                 PpPpPpp + f +++ ++ + +++++m++vFae+nkGe+iT++L+kVdk ++ThKnP+lr++  +p
  EPX71841.1 303 PPPPPPPGNDFWKDK-EEPKGNEKADMGSVFAEINKGEDITSHLRKVDKREMTHKNPELRKTGPTP 367
                 677777777776666.6888999*************************************998765 PP

>> CAP_C  Adenylate cyclase associated (CAP) C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  195.8   7.3   5.4e-62   3.2e-58       1     157 []     390     546 ..     390     546 .. 0.98

  Alignments for each domain:
  == domain 1  score: 195.8 bits;  conditional E-value: 5.4e-62
       CAP_C   1 kppklelegnkwlvenqennkeieieetelkqsvyifkCknstiqikgKvnaitldnckkvsvvvdsvvSsvevincksvkvqvlgkvptisiDktdgv 99 
                 k p++ele++kw+venq nn++i++e +elk++v++ +C+n+t+ ikgK+na++l++ck++svvvd++v+s+e+++c+++ +qv+  vp+i +D++dg+
  EPX71841.1 390 KAPRIELENTKWFVENQVNNHSIVLEGVELKHTVQVIDCSNCTLIIKGKLNAVSLSHCKRTSVVVDTLVASFEITKCSNFGCQVMDYVPMIVVDQCDGG 488
                 679************************************************************************************************ PP

       CAP_C 100 qiyLskesldteivtsksseinvsvpkeedgdykElpipeqfktki.kkgklvtevveh 157
                  +yLsk+sl+tei+ts+ss++nv+vp  e+gdy E +ipeq+k++i +kg+lv+e+v+h
  EPX71841.1 489 AVYLSKNSLSTEITTSNSSSLNVNVP-IEEGDYAERAIPEQIKHRInEKGELVSEIVRH 546
                 **************************.5******************8889******987 PP

>> TBCC  Tubulin binding cofactor C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   7.2     6e-07    0.0036       3      75 ..     422     496 ..     420     512 .. 0.87

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 6e-07
                 EEEE-S-BS-EEEE-S--S-EEEES-BS-EEE----SS-EEEES-BS..-EEE---SEEEEES-BS-EEE---SS CS
        TBCC   3 svkisnlsdctiylldplssvtiddcknctivlgpvsgsvfiedcen..ctivvacrqlrihdctnvdvylltks 75 
                  v++ ++s+ct+++ ++l++v +++ck+  +v+ +   s  i++c+n  c+++     + + +c+   vyl+ +s
  EPX71841.1 422 TVQVIDCSNCTLIIKGKLNAVSLSHCKRTSVVVDTLVASFEITKCSNfgCQVMDYVPMIVVDQCDGGAVYLSKNS 496
                 57899*****************************************96677777788888888888888877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (547 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       551  (0.0307323); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.29s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 3761.55
//
Query:       EPX71842.1  [L=341]
Description: malate dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.3e-42  144.2   0.0    5.9e-42  143.4   0.0    1.4  2  Ldh_1_C         lactate/malate dehydrogenase, alpha/beta C-te
    7.8e-41  139.5   0.0    1.3e-40  138.7   0.0    1.4  1  Ldh_1_N         lactate/malate dehydrogenase, NAD binding dom
    0.00027   20.0   0.0    0.00039   19.5   0.0    1.2  1  3Beta_HSD       3-beta hydroxysteroid dehydrogenase/isomerase
     0.0027   17.8   0.0      0.033   14.3   0.0    2.4  2  DapB_N          Dihydrodipicolinate reductase, N-terminus
  ------ inclusion threshold ------
      0.022   15.2   0.0      0.058   13.8   0.0    1.7  1  Semialdhyde_dh  Semialdehyde dehydrogenase, NAD binding domai
      0.033   13.5   0.0       0.28   10.5   0.0    2.2  1  THF_DHG_CYH_C   Tetrahydrofolate dehydrogenase/cyclohydrolase


Domain annotation for each model (and alignments):
>> Ldh_1_C  lactate/malate dehydrogenase, alpha/beta C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       3.9   1.2e+04      24      49 ..      30      54 ..      23      57 .. 0.70
   2 !  143.4   0.0     2e-45   5.9e-42       1     167 []     175     340 ..     175     340 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 3.9
                E--EEBSSSTETTEEHHHHHTTSTTS CS
     Ldh_1_C 24 kvtViGgHsgvtiipllsqvkellkl 49
                kv V+G  +g++ +pl+   k + k+
  EPX71842.1 30 KVAVLGAGGGIG-QPLSMLLKTNTKV 54
                788999888887.7776666666655 PP

  == domain 2  score: 143.4 bits;  conditional E-value: 2e-45
                 THHHHHHHHHHHHHHHTS-GGGEE--EEBSSSTETTEEHHHHHTTSTTSTHHHHHHHHHHHHHHHHHHHHHHTTSSSS-HHHHHHHHHHHHHHHTTHTE CS
     Ldh_1_C   1 TtLDivRaktflaekagvtprsvkvtViGgHsgvtiipllsqvkellklsekqleeliervqnggdevvkakkGagsatlsmAvAgakfveallrdtke 99 
                 TtLD+vRa+ f ++ ++  ++  +++V+GgHsg ti+pl   ++  ++l+  + ++l++r+q+ggdevvkak+GagsatlsmA+Aga+++++++r++ +
  EPX71842.1 175 TTLDSVRASRFASQATNGVAETLRIPVVGGHSGATIVPL--LSQGGVELTGADRDNLVHRIQFGGDEVVKAKAGAGSATLSMAYAGARMASSVIRALDG 271
                 9**************************************..778888**************************************************99 PP

                 EEEEEEEEESCCCE...CCSSEEEEEEEEEEETTEEEEE-------HHHHHHHHHHHHHHHHHHHHHHCCH CS
     Ldh_1_C 100 ilsagvyldgevgl...kdqeieyfsvPvvlgknGvekvleilklndfeeekleksvkeLkkeiekglefv 167
                 +   gv ++  v++   kdq+i+yfs+ v+lgk+Gve ++ ++++n+ ee  l+ + + Lkk+iekg++fv
  EPX71842.1 272 E--SGVEECTFVESplfKDQGIDYFSSRVTLGKDGVETIHPVGPINEYEEGLLKVALADLKKSIEKGEHFV 340
                 9..9******9996223677************************************************996 PP

>> Ldh_1_N  lactate/malate dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.7   0.0   4.3e-44   1.3e-40       1     141 []      29     173 ..      29     173 .. 0.95

  Alignments for each domain:
  == domain 1  score: 138.7 bits;  conditional E-value: 4.3e-44
                 EEEEEETTTSHHHHHHHHHHHHTTSSSEEEEE-SSHHHHHHHHHHHHHCHCCSTS-EEEEE..SSGGGGTTESEEEE--S-SS-TTTTHHHHHHHHHHH CS
     Ldh_1_N   1 vkvavvGaaGgiGqslalllankkladelaLlDiakekleGvaldlshistflsvkvkvse..keeealkdadvvvitagvprkpGetRddLlkvNakI 97 
                 +kvav+Ga+GgiGq+l++ll+++  ++elaL+Di+    +Gva+d+ hi+t ++v++ +++  + e+alk+ad+vvi+agvprkpG+tRddL+k+Na+I
  EPX71842.1  29 YKVAVLGAGGGIGQPLSMLLKTNTKVSELALFDIK--GGPGVAADIGHINTSSKVNGFSPDdkGLEKALKGADLVVIPAGVPRKPGMTRDDLFKTNASI 125
                 59*********************99999*******..99*******************9997889********************************** PP

                 HHHHHHHHHHHTTTSEEEE-SSSHH....HHHHHHHHHHTS-GGGEEE CS
     Ldh_1_N  98 vkeiveaiakvapnaivlvvsNPvd....iltevlkkasglpkkrvig 141
                 v++++ a  + apna++lvv+NPv+    i  ++l  ++ +++k ++g
  EPX71842.1 126 VRDLAFAAGETAPNAKYLVVTNPVNstvpIFKKALARVGVHQPKHLFG 173
                 *************************88777778888888888888876 PP

>> 3Beta_HSD  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   1.3e-07   0.00039       1      90 [.      32     120 ..      32     137 .. 0.89

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 1.3e-07
   3Beta_HSD   1 vvtGgaGFlGralvkeLvrlee.lkevrvlDlrespelleelskvnvkkviegDvtdkdkleealegvdvvihlaslvdvagkltedeimk 90 
                 +v+G++G +G+ l   L++++  + e+  +D++ +p +  ++ ++n+ + ++g   d + le+al+g+d+v+  a++    g++++d + k
  EPX71842.1  32 AVLGAGGGIGQPLSM-LLKTNTkVSELALFDIKGGPGVAADIGHINTSSKVNGFSPDDKGLEKALKGADLVVIPAGVPRKPGMTRDD-LFK 120
                 59**********965.5555554*****************************************************99999977776.444 PP

>> DapB_N  Dihydrodipicolinate reductase, N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   1.1e-05     0.033       2      72 ..      30     102 ..      29     115 .. 0.87
   2 ?    0.5   0.0       0.2   6.1e+02       6      36 ..     257     285 ..     252     311 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.1e-05
                 EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTCSTTTTTBHHHHSSSS--S-BEB..SSHHHHHHH-SEEE CS
      DapB_N   2 kvavvGasGrmGkevvkaveeaedlelvaavdrkeselegkdagellglgklgvavt..ddleevlekadvli 72 
                 kvav+Ga G +G+ +  ++++++++   a +d k+ + ++ d+g++  ++k++ +    + le++l+ ad ++
  EPX71842.1  30 KVAVLGAGGGIGQPLSMLLKTNTKVSELALFDIKGGPGVAADIGHINTSSKVNGFSPddKGLEKALKGADLVV 102
                 8********************************************9999976665552456888888888554 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.2
                 ETTTSHHHHHHHHHHHHSTTEEEEEEEETTC CS
      DapB_N   6 vGasGrmGkevvkaveeaedlelvaavdrke 36 
                 +Ga  rm ++v++a++ ++++e    v+++ 
  EPX71842.1 257 AGA--RMASSVIRALDGESGVEECTFVESPL 285
                 566..************99999888887765 PP

>> Semialdhyde_dh  Semialdehyde dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   1.9e-05     0.058       1      71 [.      30     102 ..      30     109 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1.9e-05
                     EEEEETTTSHHHHHHHHHHHCTSSEEEEEEEESTTTTTSBHHHHSG...GGTTTECEBEEE.GGGGGCTT-SEEE CS
  Semialdhyde_dh   1 kvaivGatGyvGqellrlLeehpevelvvllsssrsaGkklaeavk...aleegkdlkved.vdeeelkevdivf 71 
                     kva++Ga G +Gq l  lL+++ +v++++l+  +   G  +a+  +   + ++++ ++ +d   e++lk++d+v+
      EPX71842.1  30 KVAVLGAGGGIGQPLSMLLKTNTKVSELALFDIKG--GPGVAADIGhinTSSKVNGFSPDDkGLEKALKGADLVV 102
                     7****************************999887..55555554423333444444444433344446666665 PP

>> THF_DHG_CYH_C  Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   9.3e-05      0.28      37     105 ..      29     126 ..      22     134 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 9.3e-05
                    -EEEEE---TTTHHHHHHHHHCT..........................T-EEEEE-TTSCCHHHHHCCSSEEEE-SS...-TT-B-GGGS-TT-E CS
  THF_DHG_CYH_C  37 kkvvvvGrsnivgkplallLlek..........................natVtvchsktkdlaeitreadivvvavG...kpelikaemvkegav 103
                     kv+v+G++  +g+pl++lL+++                           + V  +    k l++ ++ ad+vv+ +G   kp++ + + +k++a 
     EPX71842.1  29 YKVAVLGAGGGIGQPLSMLLKTNtkvselalfdikggpgvaadighintSSKVNGFSPDDKGLEKALKGADLVVIPAGvprKPGMTRDDLFKTNAS 124
                    5899****************9954455555555556665544554443355566666666889999999999999999333356777777777776 PP

                    EE CS
  THF_DHG_CYH_C 104 vi 105
                    ++
     EPX71842.1 125 IV 126
                    65 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (341 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       240  (0.0133861); expected 358.6 (0.02)
Passed bias filter:                      212  (0.0118244); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 2336.11
//
Query:       EPX71843.1  [L=281]
Description: U3 snoRNP-associated protein Cic1/Utp30 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.3e-37  128.7   0.4    3.1e-37  128.3   0.4    1.2  1  Ribosomal_L1  Ribosomal protein L1p/L10e family


Domain annotation for each model (and alignments):
>> Ribosomal_L1  Ribosomal protein L1p/L10e family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.3   0.4   1.7e-41   3.1e-37       1     203 [.      27     234 ..      20     235 .. 0.91

  Alignments for each domain:
  == domain 1  score: 128.3 bits;  conditional E-value: 1.7e-41
                   HHHHS-SS..S--EEEEEEEESSS-TTSGGG-.-EEEEE-STSTSSCS-EEEEE-HHHHH...HHHHTT.....-SEEETCHHHHHHT-HHHHHHTC CS
  Ribosomal_L1   1 Llkhakkk..fdesveialnlttkkpkkadqr.kpgkipLphplgkevkiclitkdpqaeyakeakeag...riakviglkklkkkyksfeakrkll 91 
                   Ll++ k+k  + e++ i+l+++t+ p++++    p ki Lp+ + +  + cl++k++q++ ++e++++g    i+kv+++ +lk kyk+ ++k +l 
    EPX71843.1  27 LLQYVKQKgyNPEKERIYLQINTFHPPENEALrRPSKIFLPNRVLRAEDACLFVKGSQQQIQDEIAKQGldeMITKVVSIARLKLKYKTVKEKCQLR 123
                   5677777655789***********999988778**********99999***********9999********************************** PP

                   CH-SEEEEEGGGHHHHHHHCHHHH..GGGT-S-ECC..CT.BTS-HHHHHHHHCTTEEEEE-TTTSEEEEEEEETTSSHHHHHHHHHHHHHHHHHT. CS
  Ribosomal_L1  92 kefdlfladdrimpllpklLGkvf..gkrkkmPipvltkgtvkedvkkevekalkstvvvrldkgtclsvkvGklsftaeelaeNieavvkalvek. 185
                   +++ +f+ d+r  + ++ l+G v+  +k k++Pi  ++k   k++++ +v ++l+st +++l+ gt+ s+  G +s+++e+l +Niea+ ++l  k 
    EPX71843.1 124 DSHGFFFMDKRAAKDVTALMGMVLaqKKIKTFPISLDQK---KDTIRHQVARCLHST-FFQLSAGTSHSILCGLASQSSEQLHQNIEAIFRFLLGKf 216
                   ************************544445666666555...889**********77.6666*********************************** PP

                   STTTSGSEEEEEEEETTS CS
  Ribosomal_L1 186 vpkkwkniksiylkttms 203
                   +p++w+ i ++ +kt++s
    EPX71843.1 217 IPRGWNAIDNVAIKTADS 234
                   ****************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (281 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       677  (0.0377601); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2056.15
//
Query:       EPX71844.1  [L=314]
Description: BIG1 family ER membrane protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    0.00097   19.0   0.1     0.0019   18.0   0.1    1.6  1  ATP-synt_S1  Vacuolar ATP synthase subunit S1 (ATP6S1)
  ------ inclusion threshold ------
      0.053   13.6   0.1      0.094   12.8   0.1    1.3  1  DUF4975      Domain of unknown function (DUF4975)


Domain annotation for each model (and alignments):
>> ATP-synt_S1  Vacuolar ATP synthase subunit S1 (ATP6S1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.1   2.2e-07    0.0019      95     144 ..     262     312 ..     188     314 .] 0.87

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 2.2e-07
  ATP-synt_S1  95 dCvgFfsigiwmgLvvslillliltyglhmimdlktm.drFddpkgktitv 144
                  d  +Ff++gi+mg ++ ++l+  l++  +++ +++     Fd p+ k+++ 
   EPX71844.1 262 DRYQFFTPGIFMGYLALVVLVPTLIISCKLLSSVQISyHAFDSPRKKNVST 312
                  5578******************************965278*****999886 PP

>> DUF4975  Domain of unknown function (DUF4975)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   1.1e-05     0.094      14      86 ..     187     255 ..     182     265 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.1e-05
     DUF4975  14 kyttvqevkleekssngevtenessytLkdnayvlfnRLksknkisftvktseksdkFGislvrgtDskkyys 86 
                 k+++vq v   + +++ e  ++e+s +++ n +v++nRL+++  is+ v+  ++    G sl++ +D++++ +
  EPX71844.1 187 KFAAVQ-VSEDNSTKQKEEENEEESLAIESNYFVSMNRLRHAQPISLPVENMNNR---GNSLTHNKDNQSVSN 255
                 777444.44444444555667778999999******************9876664...778888888777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       762  (0.042501); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 2190.72
//
Query:       EPX71845.1  [L=289]
Description: INSIG domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-26   92.6   7.5    8.1e-26   91.0   7.5    1.7  1  INSIG     Insulin-induced protein (INSIG)
  ------ inclusion threshold ------
      0.011   15.8   4.3      0.019   15.0   4.3    1.4  1  TspO_MBR  TspO/MBR family
      0.072   13.0   2.3        0.1   12.6   1.1    1.9  2  SLATT_1   SMODS and SLOG-associating 2TM effector domain 1
      0.099   12.9   5.8       0.18   12.1   5.8    1.4  1  TctB      Tripartite tricarboxylate transporter TctB family
       0.13   12.4   0.2       0.38   10.8   0.0    2.0  2  ETRAMP    Malarial early transcribed membrane protein (ETRAMP
       0.16   11.6   7.0       0.24   11.0   3.6    2.2  2  MASE3     Membrane-associated sensor domain
        2.2    6.4   6.3          3    6.0   6.3    1.1  1  DUF2070   Predicted membrane protein (DUF2070)


Domain annotation for each model (and alignments):
>> INSIG  Insulin-induced protein (INSIG)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.0   7.5   3.2e-29   8.1e-26       2     212 .]     102     289 .]     101     289 .] 0.80

  Alignments for each domain:
  == domain 1  score: 91.0 bits;  conditional E-value: 3.2e-29
       INSIG   2 rallLfvlGvvygvlvtrlheerkllvkkeksssswryl....vfwGlagvalGlllpwlDrlweekfaeeeeeeeeekeeekaaseadwalvvrsiga 96 
                 +++++f+lG +++++++ + +e+kl  + +++  sw +     v +Gl+++ l+ +++++D  +           + ++ +++++++++++   r+++a
  EPX71845.1 102 KFFAIFGLGSIFTYMAEGILQEAKL-SSLTVQLGSWVFKpnwsVAFGLVAMGLAVAYRLMDVRC----------PSGSAANRRTSQSSQFQILSRYLAA 189
                 7889*******************99.34558999999994444555556666667777777733..........23456789999************** PP

       INSIG  97 fvGiafAirklpwastlqvsl.tlalvnpfLWyliDrskpGfllsaavgllgtavllgl.npdlvpaPsaaasaaaaaaaaeealggasqeslevaiwl 193
                 f++++++++kl  +++ ++s  ++++ + ++Wy++Drsk+Gf++s++++++g+++++++ +++ +    +              l   + +++++++w+
  EPX71845.1 190 FATLLLTMKKLLSTQNAHSSFvAMVASAATIWYVFDRSKNGFTVSCIMSIIGSIAYYAFvDNTPF----S--------------LFEPNPSEYQFRYWI 270
                 ***********9999988886155666789*************************8884343333....2..............2222345689***** PP

       INSIG 194 lsvLFcscvcfGniGRrLa 212
                 +++LF++++++Gn GR L+
  EPX71845.1 271 PMILFSASTIVGNAGRLLF 289
                 ****************995 PP

>> TspO_MBR  TspO/MBR family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   4.3   7.4e-06     0.019       7      98 ..     104     223 ..      99     259 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 7.4e-06
                 HHHHHHHHHHHHCCH..HHHHHS---TTS--HHHHTTHHHHHHHHHHHHHHHHHHH...........................HHHHHHHHHHHHTSGG CS
    TspO_MBR   7 llvgllgglftksee..ewykslrkPpwaPpdwvfppvWtvlyilmgvaaylvwka...........................lalyavqlvlnllwsp 76 
                 +++  lg++ft ++e     ++l    ++  +wvf p W+v ++l+++ ++++++                            la++a+ l+l++   +
  EPX71845.1 104 FAIFGLGSIFTYMAEgiLQEAKLSSLTVQLGSWVFKPNWSVAFGLVAMGLAVAYRLmdvrcpsgsaanrrtsqssqfqilsryLAAFAT-LLLTMKKLL 201
                 5677788888886553333467778888899*************99998888888788899999999999*999999997765433333.666666666 PP

                 CTTTTTSGGGHHHHHHHHHHHH CS
    TspO_MBR  77 lffglkspvlalvdivallglv 98 
                    +++s ++a+v  +a +  v
  EPX71845.1 202 STQNAHSSFVAMVASAATIWYV 223
                 6666666666666555544333 PP

>> SLATT_1  SMODS and SLOG-associating 2TM effector domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       1.4   3.6e+03      97     120 ..      44      76 ..      31      77 .. 0.64
   2 ?   12.6   1.1   3.9e-05       0.1      17      73 ..     170     226 ..     143     232 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 1.4
     SLATT_1  97 a.........eateeewaklVadaEeaisreht 120
                           e+ +e+  + V d E+  s++++
  EPX71845.1  44 GlftplrleeEELDEDDNSSVHDYEDYASKQKD 76 
                 444444444466777778889999999888875 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 3.9e-05
     SLATT_1  17 aeeneraakrwrlllillellalllaalrafgelsvdlvgvlaavaaallaWlelkq 73 
                 a++ +++++++++l   l ++a+ll +++++ +++ +   ++a+va+a + W  + +
  EPX71845.1 170 ANRRTSQSSQFQILSRYLAAFATLLLTMKKLLSTQNAHSSFVAMVASAATIWYVFDR 226
                 6778889999*******************88888888***************87766 PP

>> TctB  Tripartite tricarboxylate transporter TctB family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   5.8   7.1e-05      0.18       9     127 ..     105     249 ..      96     251 .. 0.60

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 7.1e-05
        TctB   9 llag...va..favgald.......tg..arvgpg.ffPll.lgvllallgllllv.......aadgekeekearedwrkllklvlallaalllyalll 84 
                 +++g   ++  +a            ++   ++g   f P + ++++l+++gl+++        ++  +++++++++++   l + la   a++  +l++
  EPX71845.1 105 AIFGlgsIFtyMAE---GilqeaklSSltVQLGSWvFKPNWsVAFGLVAMGLAVAYrlmdvrcPSGSAANRRTSQSSQFQILSRYLA---AFATLLLTM 197
                 33332222222112...133455442223444444455977699999999988888999*988555555666665556666666666...555555555 PP

        TctB  85 epl........Gfilatalflllll.g.reerkwlkalilavvlallvyllFt 127
                 + l         f+  +a ++++++ + r+++ + +++i++++ +++ y++F+
  EPX71845.1 198 KKLlstqnahsSFVAMVASAATIWYvFdRSKNGFTVSCIMSIIGSIA-YYAFV 249
                 55555666665666555555545555467788899999999999999.89986 PP

>> ETRAMP  Malarial early transcribed membrane protein (ETRAMP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00015      0.38      32      58 ..      65      90 ..      26     110 .. 0.82
   2 ?   -2.9   0.1         3   7.7e+03       8      21 ..     189     202 ..     185     218 .. 0.63

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00015
      ETRAMP 32 kekakkaikkiddkiekkkkkkKliii 58
                 + ++ a k++dd+++k k+kk+ iii
  EPX71845.1 65 HDYEDYASKQKDDDLKKEKRKKR-III 90
                37788999**********77666.555 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 3
      ETRAMP   8 lffafLlavnlltp 21 
                  f  +Ll ++ l +
  EPX71845.1 189 AFATLLLTMKKLLS 202
                 45556666555544 PP

>> MASE3  Membrane-associated sensor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   3.6   9.5e-05      0.24      70     123 ..     172     224 ..     102     227 .. 0.77
   2 ?    6.3   0.8    0.0025       6.4      19      90 ..     211     280 ..     207     284 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 9.5e-05
       MASE3  70 ssanlatqlwiaaRllealslllavlllkrkvlrayavflvyalvtlllllsif 123
                   + ++ q+ i++R+l+a++ ll+ +    + ++a++ f++ ++++++ ++++f
  EPX71845.1 172 RRTSQSSQFQILSRYLAAFATLLLTMKKLLSTQNAHSSFVA-MVASAATIWYVF 224
                 4566889************9999655444443555555555.455566666665 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0025
       MASE3  19 vvallifliawntrkftknnyllflGiaflfvglldllHtlsykgmpiftessanlatqlwiaaRllealsl 90 
                 v  ++ ++ +w++++++kn ++  +++++ ++g +    ++  +  ++f+++ +++++ +wi + l+ a ++
  EPX71845.1 211 VAMVASAATIWYVFDRSKNGFT--VSCIMSIIGSIAYYAFVDNTPFSLFEPNPSEYQFRYWIPMILFSASTI 280
                 4455667889999998888876..69************************************9988888765 PP

>> DUF2070  Predicted membrane protein (DUF2070)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   6.3    0.0012         3      39     172 ..     104     249 ..      84     252 .. 0.75

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0012
     DUF2070  39 fgillfglp..alvaflltlpvlrilggr.....ltykrslflalltelivviisllaillsall......qalvllalvlslalvfalrllvlvavsd 124
                 f+i+ +g    +++ ++l    l++l  +     ++ ++s+ + l+++ ++v+  l+ +            ++++ + ++  + ++fa  ll +  + +
  EPX71845.1 104 FAIFGLGSIftYMAEGILQEAKLSSLTVQlgswvFKPNWSVAFGLVAMGLAVAYRLMDVRCPSGSaanrrtSQSSQFQILSRYLAAFATLLLTMKKLLS 202
                 333333322337778888888888887778888999999999999999999887776665544445556866666666666699999999999999*** PP

     DUF2070 125 esllkavlpaliqpllailllvlyfspesfllllllslifalavylfi 172
                 ++  +++++a++ +++ i +++   s++ f +  ++s+i  +a y+f+
  EPX71845.1 203 TQNAHSSFVAMVASAATIWYVFDR-SKNGFTVSCIMSIIGSIAYYAFV 249
                 **********99999999888888.78888888899999999998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       967  (0.053935); expected 358.6 (0.02)
Passed bias filter:                      543  (0.0302861); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.49u 0.29s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 2103.98
//
Query:       EPX71846.1  [L=919]
Description: histone lysine methyltransferase Set1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.2e-23   82.7  12.0    6.7e-23   81.7   0.2    3.5  3  N-SET      COMPASS (Complex proteins associated with Set1p) c
    3.2e-21   76.5   8.7    8.4e-21   75.1   0.3    3.8  3  SET        SET domain
    1.4e-16   59.8   2.4    1.4e-16   59.8   2.4    2.1  2  SET_assoc  Histone lysine methyltransferase SET associated
    2.7e-10   39.9   0.0    8.3e-08   31.9   0.0    3.2  2  RRM_1      RNA recognition motif. (a.k.a. RRM, RBD, or RNP do


Domain annotation for each model (and alignments):
>> N-SET  COMPASS (Complex proteins associated with Set1p) component N
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   1.0      0.72   3.2e+03     109     126 ..     208     225 ..     194     256 .. 0.47
   2 ?   -2.9   0.4       1.4   6.3e+03      86     104 ..     458     476 ..     431     511 .. 0.56
   3 !   81.7   0.2   1.5e-26   6.7e-23       2     173 .]     632     774 ..     631     774 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.72
       N-SET 109 veaeakkdekaaaaaaae 126
                 +e++ kk+e++++++ + 
  EPX71846.1 208 REQQMKKEEQKREEEMEA 225
                 222222222222222222 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.4
       N-SET  86 kIpdkeKskYLphrrkvqk 104
                 k+p ++K+k    rr+ +k
  EPX71846.1 458 KVPTENKIKSRLQRRRRKK 476
                 4444444443322222222 PP

  == domain 3  score: 81.7 bits;  conditional E-value: 1.5e-26
       N-SET   2 illdldglqelikDeeDlkflkkllkeldekeassdignlelwawkqkeikelnglegikekeekie...gyylenatGcarteGykkIpdkeKskYLp 97 
                 +l+dldg+q l+kD++Dl+ l+++l++ d     ++ig+ ++wa+++k+ k +n  + ++e++  +    gy + n+tG+a++eGy+ Ip +eKs+YLp
  EPX71846.1 632 VLVDLDGIQFLVKDDQDLHCLREALSSED----ANEIGDPNYWAYRRKSCKYKN-GDIPVESSLVLPvsvGYERINSTGSAKSEGYYIIPTAEKSQYLP 725
                 579************************99....********************9.455666664444559****************************9 PP

       N-SET  98 hrrkvqkaletveaeakkdekaaaaaaaeeaaekesskqeissSRenRannRRfvadieaqkaalgtesdlLslNq 173
                  r +      tve                   ++++s   + +SR  R+nnRR++a +e+    l  e+dlL++N+
  EPX71846.1 726 LRNR-----STVEG-----------------GNQSTS---RVTSRMHRVNNRRLAAGVEK--SLLPAEADLLRFNA 774
                 8865.....56661.................122223...348***************95..78***********6 PP

>> SET  SET domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0     0.071   3.2e+02      66     120 ..     200     263 ..      98     300 .. 0.69
   2 ?    2.3   0.6     0.043   1.9e+02      36      95 ..     480     569 ..     405     628 .. 0.71
   3 !   75.1   0.3   1.9e-24   8.4e-21       2     168 ..     792     896 ..     791     897 .. 0.92

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.071
                 HHHHHHHHHHHHHHHHTHHHHHHHXTTTSX........XXHCCCCC.HCCCHEEEETEEEEEEC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........xxxxxxxx.xxxxxxxxxxxxxxxxx RF
         SET  66 klakdqkqaekedtdaalkasskaesdlna........skpeagaf.saiagysidaralksgn 120
                 + a+d +++e++  + + k++ ++e+ ++a        ++++ g   ++ a++++  +++++ n
  EPX71846.1 200 DFAEDLRKREQQMKKEEQKREEEMEAIRKAsnvppwrrAQNNTGFNrHQNATSVFSNKDQAYPN 263
                 3444444444444444444555555555433444566533333333455555555555555554 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.043
                 H..................HTEEEEEXG.GXXGGSX..HHHHHHHTTSSHHHHHHHHHHHHHHHHHHTHHHHHHHXTTTS.........X CS
                 x..................xxxxxxxxx.xxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........x RF
         SET  36 e..................aylfslpea.pknlaft..kelakasastllqklakdqkqaekedtdaalkasskaesdln.........a 95 
                                    ++++ l+e  p++ +f+  k    +++++ll+++ +d++ +ek+ + +  ++ s ++sd+          +
  EPX71846.1 480 RplhyqlnqqtedfsdsefEHEDGLDEEkPLDGSFDgyKPTKTEESTPLLSETSEDEEFLEKFHRGRPKNRLSRKKSDKLdidytssseT 569
                 044444444444445555666666776654446776799999999********************9999999999999985444332220 PP

  == domain 3  score: 75.1 bits;  conditional E-value: 1.9e-24
                 CEEEESSXBXTTXEEEEEE.ECCEECHHHHHHHHHH........HTEEEEEXGGXXGGSXHHHHHHHTTSSHHHHHHHHHHHHHHHHHHTHHHHHHHXT CS
                 xxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxx........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         SET   2 rGvfAtedIpkgeficeyp.eeiiltkdeadksele........aylfslpeapknlaftkelakasastllqklakdqkqaekedtdaalkasskaes 91 
                  G+fA+e+I k+++++ey+ e  ++++  ad++e++         ylf ++                                                
  EPX71846.1 792 LGLFAREHIDKNDMVIEYVgE--VIRQRIADNREKNyvregigdSYLFRID------------------------------------------------ 840
                 59*****************66..8888888888888899999999999999................................................ PP

                 TTSXXXHCCCCCHCCCHEEEETEEEEEECCCGTTGGGCEEXSSSSEEEEEEEETTSSEEEEEESSXBXTTEEEEEXT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         SET  92 dlnaskpeagafsaiagysidaralksgngagplarflNHsCdpNcnltvqnvlrgprvavfAtrdIkkGeEltidY 168
                                   ++d  a+k+gn a    rf+NHsC pNc +++ +v++ ++++++A rdI +GeElt+dY
  EPX71846.1 841 ---------------EDIIVD--ATKKGNIA----RFINHSCAPNCIARIIRVEGKRKIVIYADRDIMQGEELTYDY 896
                 ...............456689..77******....****************************************** PP

>> SET_assoc  Histone lysine methyltransferase SET associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.8   2.4   3.2e-20   1.4e-16       1      65 [.     283     347 ..     283     348 .. 0.97
   2 ?   -4.2   0.2       3.1   1.4e+04      34      39 ..     710     715 ..     709     715 .. 0.86

  Alignments for each domain:
  == domain 1  score: 59.8 bits;  conditional E-value: 3.2e-20
   SET_assoc   1 FiskksvpvhkvtvedlkkrLkkyeweriledktGyYivFndskeAerCfraedgtklftyrmvm 65 
                 Fi++k+vp ++v ++d+k++++k+++e i+++ +G+Yi+F++++eA+ Cf + d+t + ++r+++
  EPX71846.1 283 FIDDKFVPPDRVYYSDIKHHFRKFRYEGIYMNSDGFYITFSNYREASSCFWTLDKTFVQNCRIKL 347
                 9***********************************************************99876 PP

  == domain 2  score: -4.2 bits;  conditional E-value: 3.1
   SET_assoc  34 tGyYiv 39 
                 +GyYi+
  EPX71846.1 710 EGYYII 715
                 7****7 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.9   0.0   1.8e-11   8.3e-08       1      55 [.      99     154 ..      99     176 .. 0.93
   2 !    4.4   0.0    0.0072        32      41      70 .]     318     346 ..     291     346 .. 0.80

  Alignments for each domain:
  == domain 1  score: 31.9 bits;  conditional E-value: 1.8e-11
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHH CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekA 55 
                 +fV nL+p vt ++L+ +F+ fG+i+ ++l  +  tg+s g + + F ++e+  kA
  EPX71846.1  99 VFVYNLSPLVTADQLRYHFKSFGDISQLDLQLNpYTGTSLGLCQISFSKHESVSKA 154
                 8**************************************************99887 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.0072
                 EEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1  41 fafVeFeskedAekAlealngkklggrelk 70 
                 f +++F + ++A ++  +l+++ ++++++k
  EPX71846.1 318 F-YITFSNYREASSCFWTLDKTFVQNCRIK 346
                 4.89**********************9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (919 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1108  (0.0617993); expected 358.6 (0.02)
Passed bias filter:                      505  (0.0281667); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.77u 0.33s 00:00:01.10 Elapsed: 00:00:00.48
# Mc/sec: 5699.88
//
Query:       EPX71847.1  [L=756]
Description: condensin complex non-SMC subunit Cnd2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.1e-174  583.2  15.3   2.6e-174  581.9  15.3    1.5  1  Cnd2      Condensin complex subunit 2
  ------ inclusion threshold ------
      0.011   16.0   1.4      0.069   13.4   0.0    2.8  2  CNDH2_N   Condensin II complex subunit CAP-H2 or CNDH2, N-ter
       0.72   10.1   0.0       0.72   10.1   0.0    3.8  3  PNISR     Arginine/serine-rich protein PNISR


Domain annotation for each model (and alignments):
>> Cnd2  Condensin complex subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  581.9  15.3  4.4e-178  2.6e-174      14     765 ..      15     741 ..       4     742 .. 0.74

  Alignments for each domain:
  == domain 1  score: 581.9 bits;  conditional E-value: 4.4e-178
        Cnd2  14 iplNDDeaEkakrrksrqalheaqinqikaaatparrrksaaveeaassssprtPktpmkrvpilanfeewmklatdNKInakNsWnlaLIDyfhdmsL 112
                   lNDD+ Ek+k++++ +   e++ ++++a ++ ++rr+s   +         +P     +vp+l+nfeew+klatdNKIn +N+Wn+aLIDyfhdmsL
  EPX71847.1  15 NSLNDDALEKKKAKQKSRK--ERELRRSSALQSITPRRESLGGPG------YGSPFNSSYQVPVLSNFEEWIKLATDNKINSTNTWNFALIDYFHDMSL 105
                 579********99988777..566666666677777777555444......567777899*************************************** PP

        Cnd2 113 LkegdsvNFqkAsctLDgcvKIYtsRVDSvatetgkllsgLadstekkkkdneeeedeeegdeeeeeeegedgeekkkkkkKkqrsseatlaksfeslq 211
                 L+eg+ +NFqkAsctLDgcvKIYtsR+DSvatetgkllsgLa++++          + e++d++e+ +e+e+g   kk+++K++ +s +tlak+fesl+
  EPX71847.1 106 LREGEAINFQKASCTLDGCVKIYTSRIDSVATETGKLLSGLANDSK---A-----LG-ETEDTSEN-AEDEEGR--KKRERKRANRSVNTLAKDFESLR 192
                 ********************************************83...1.....11.12333332.2455555..6665666666688********** PP

        Cnd2 212 lkklelefavDPLFkkasAdfDeggakglLLNhLsidsegrivfDssddaedaa..............sqteeeeeeeeeeedveidlasLaa...rff 293
                 +kk+ele ++DPLFkk++AdfDe gakglL+NhLs+d++g+ivfDssd   +                + + e e+e+++ ++  i+l++L++   r+f
  EPX71847.1 193 AKKFELEGSFDPLFKKMCADFDEDGAKGLLMNHLSVDQHGKIVFDSSDAIIKDLegndnkegnledinTGNPEAENENKDADTDGISLEALGSiqkRYF 291
                 ************************************************65443389*********9985556666666666777777777777766888 PP

        Cnd2 294 pdlerleeldicpslknfdlgdapsgsldipflkapedwrqdkddleaedelgdasgilldd........dnaagfd...ddddgllnafdlggdagfg 381
                  d+++   l+icpsl++f++ +  +g+ld++ lk   d   + ++++ +  l++++++   d        d     d   ddd++  +   + +d+++g
  EPX71847.1 292 IDIDQ---LTICPSLQGFEFDN--KGNLDVSLLKSLSD---EVNMIAPNSLLEEQAAMNG-DvelgsaplDS----DgsdDDDNEQGHIVHALEDMAYG 377
                 88766...9***********99..99********9998...3333333221222222221.11222222222....23314443434444444588888 PP

        Cnd2 382 eggeawareaalepq..dede.gevedn.dey.avslsr.kqkkekveelrdilsyfdqalqknWagPehWrirrik...................dvn 455
                 ++++    +++  p    ed  ++++d+ d+  +++l + + +++  ++++ i +yfd+  +knWagPehWri++ +                   d++
  EPX71847.1 378 DENVDL--STK--PLdeFEDPtNNMQDDiDTGeTINLANySVDNQ--SSVNGIYEYFDKSIKKNWAGPEHWRIQALRkrsifqppgmdlsnvsegaDTT 470
                 874444..433..33211233235555555444778777443333..44457999*********************559***********999988877 PP

        Cnd2 456 kseeaakkkrkekepfeidFeapldesvaealftqassnsaislpkkqlkkksrnlLPddkhfnskqLlklflkPkarlsrrkeeveegem..deafwa 552
                  ++++ +++r++ ++ +idF +++d    ++l t+as   +++lpk+++kk++r lLPdd++++sk+Ll+lflkPk++l      + +ge+  +  f  
  EPX71847.1 471 RTSTSLERRRRRETDNTIDFTKEVD---LDSLLTPAS--GSLKLPKSHWKKHNRCLLPDDYQYDSKRLLQLFLKPKVTLMPY--VSFNGETgvKRVF-- 560
                 77778888889999********999...788887877..89************************************98888..2234444114444.. PP

        Cnd2 553 kqkaeeeaakedeeapqGdyDanffadddglpfpqdlgggddddDddlefadarehfspaagaagatgltaelagleatagaeaklnetlafgstlvtq 651
                 + ++e++a+     +  G  D+    d dg +++   + g  d+D    +++ re+ s                    t        ++  fg++l+ +
  EPX71847.1 561 EGQDEADAS---APIYPGGFDE----DSDGGDME---EQGLHDFDGG-SMQELRENTSS------------------PT------PPSSAGFGENLLLN 624
                 222222221...1222466665....33333232...2355666632.23344444443..................12......245689******** PP

        Cnd2 652 prrvrkeyvqYArvAKkvDvrrLKeelWklieeellesaaeeeesseeaakske...keekgalkFtevmnnLkkvypkqmmediStslaFiclLHLAN 747
                  r +++  ++YA++AK+vDv+ LKe++Wk ++ e+++  + ++++ e++++++    ++e+  ++F++ +++L++ y +++++diSts+aFiclLHLAN
  EPX71847.1 625 ARLAKPDSINYAKRAKRVDVKVLKENIWKCLDLEEKNIPEASKSNAESNNDEEPkeeEKEEPVRTFSSTVSQLENLYGQKELKDISTSFAFICLLHLAN 723
                 ******************************988777654443333333333322445788999************************************ PP

        Cnd2 748 EkgLklekqedledlkIr 765
                 E+ L+l ++ed++d+ I+
  EPX71847.1 724 ENALNLISNEDFSDVFIQ 741
                 ***************997 PP

>> CNDH2_N  Condensin II complex subunit CAP-H2 or CNDH2, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   1.2e-05     0.069      34     100 ..     107     173 ..      65     185 .. 0.74
   2 ?   -0.4   0.3      0.22   1.3e+03      72     102 ..     655     685 ..     640     693 .. 0.54

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1.2e-05
     CNDH2_N  34 fdggkttlnFaeAaLliqgsavvYsrKveyLyslvyqtlellskkkk.kkqkesesekgeded.aeaae 100
                 ++   + +nF +A+  + g +++Y+ +++ + + + + l  l++ +k   ++e +se++ede+ +++ e
  EPX71847.1 107 RE--GEAINFQKASCTLDGCVKIYTSRIDSVATETGKLLSGLANDSKaLGETEDTSENAEDEEgRKKRE 173
                 33..4689***********************************99994233333334444444222222 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.22
     CNDH2_N  72 lellskkkkkkqkesesekgeded.aeaaeae 102
                 l+ l++k+  + ++s+ e+++de+ +e+ ++e
  EPX71847.1 655 LD-LEEKNIPEASKSNAESNNDEEpKEEEKEE 685
                 54.34444445555556666666634444433 PP

>> PNISR  Arginine/serine-rich protein PNISR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00012      0.72     163     196 ..      15      48 ..      10      58 .. 0.83
   2 ?   -5.2   6.6         3   1.8e+04     125     140 ..     162     177 ..     130     278 .. 0.66
   3 ?    1.2   0.9     0.064   3.8e+02      57      81 ..     660     684 ..     633     711 .. 0.56

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00012
       PNISR 163 kavAkevlkkarakaskapakqltassaLasitG 196
                  ++  ++l+k++ak+++++ ++l +ssaL+sit 
  EPX71847.1  15 NSLNDDALEKKKAKQKSRKERELRRSSALQSITP 48 
                 5667899*************************96 PP

  == domain 2  score: -5.2 bits;  conditional E-value: 3
       PNISR 125 eeeeepeakteeekqa 140
                 + e e+ +k++e k+a
  EPX71847.1 162 NAEDEEGRKKRERKRA 177
                 2222222222222222 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.064
       PNISR  57 knprnlakskfdsedeksdeeeeeg 81 
                 kn  +++ks+ +s+++++ +eee++
  EPX71847.1 660 KNIPEASKSNAESNNDEEPKEEEKE 684
                 3333333333333333333333221 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (756 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       912  (0.0508673); expected 358.6 (0.02)
Passed bias filter:                      421  (0.0234815); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.70u 0.30s 00:00:01.00 Elapsed: 00:00:00.46
# Mc/sec: 4933.36
//
Query:       EPX71848.1  [L=169]
Description: rab GTPase binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-30  105.1   0.1    2.8e-30  104.8   0.1    1.1  1  PRA1      PRA1 family protein
  ------ inclusion threshold ------
       0.11   12.7   2.1        2.2    8.5   0.2    2.2  2  DUF3784   Domain of unknown function (DUF3784)
       0.12   10.3   0.1       0.65    7.9   0.0    1.8  2  IgaA      Intracellular growth attenuator protein IgaA
       0.24   10.3   0.0       0.32    9.9   0.0    1.1  1  DOCK_N    DOCK N-terminus


Domain annotation for each model (and alignments):
>> PRA1  PRA1 family protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.8   0.1   6.2e-34   2.8e-30       3     141 ..      24     162 ..      22     164 .. 0.96

  Alignments for each domain:
  == domain 1  score: 104.8 bits;  conditional E-value: 6.2e-34
        PRA1   3 laplRpwsefldlsrfslPkslskatsRvkkNllyfrtNYlivvllvlllslltnplslivllllvlawlflyflrseplvlfgrelsdrvvlivllvv 101
                 l+  +++ efld++r+s+P+++++a+sRv+ Nl+ f++NYl++++++ +++lltn l  iv+++ +++++ + + + +++++++r  +++ ++++l +v
  EPX71848.1  24 LSGFKSVGEFLDVRRVSRPENFGEAQSRVRFNLRRFSSNYLAIIAILAIYCLLTNVLLSIVIAAGAVGVYGIRKRQGNEVQIGQRVYTKSSLYTTLGCV 122
                 567899**********************************************************************99999999999************ PP

        PRA1 102 svlllfltgavlvllwalliglllvllHAsfrkrndkfkd 141
                  ++l ++++++ +++w +++++++vl H+++ +++ + ++
  EPX71848.1 123 LIPLGLFASPIQTIFWLVGASAVCVLGHGALFEPPVESAF 162
                 ********************************99988766 PP

>> DUF3784  Domain of unknown function (DUF3784)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.2   0.00049       2.2      41      85 ..      55      93 ..      47      99 .. 0.66
   2 ?    4.0   0.1     0.013        57      35      81 ..     108     148 ..     104     154 .. 0.66

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00049
     DUF3784 41 klsrfmgivllligilflllgllsaiesealliialiviiiiviy 85
                 l rf+ ++l +i+ ++++ +ll     +++l++++i+  ++ +y
  EPX71848.1 55 NLRRFSSNYLAIIA-ILAIYCLL-----TNVLLSIVIAAGAVGVY 93
                699***********.55555555.....44444445555555444 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.013
     DUF3784  35 ekydekklsrfmgivllligilflllgllsaiesealliialiviii 81 
                 + y +  l++  g+vl+ +g   l ++ +   ++ ++l++a +v+++
  EPX71848.1 108 RVYTKSSLYTTLGCVLIPLG---LFASPI---QTIFWLVGASAVCVL 148
                 56777777777777777777...444444...677777777766665 PP

>> IgaA  Intracellular growth attenuator protein IgaA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1     0.029   1.3e+02     332     364 ..      53      84 ..      32      88 .. 0.78
   2 ?    7.9   0.0   0.00014      0.65     183     254 ..      90     161 ..      86     167 .. 0.82

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.029
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        IgaA 332 nfPlqrwgknlvlavgsllvllllllyvplslp 364
                 +f l+r++ n  la+ ++l++  ll++v ls+ 
  EPX71848.1  53 RFNLRRFSSNY-LAIIAILAIYCLLTNVLLSIV 84 
                 69999999986.566788888888899888875 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.00014
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        IgaA 183 vellkiRketkeeyalsrseglreallivlallllflall.sPavllpWlvlaaalllavglwlllrplskke 254
                 v +  iRk   +e ++ +   ++++l  +l+ +l+ l l+ sP+ ++ Wlv+a+a ++++g   l+ p+ +++
  EPX71848.1  90 VGVYGIRKRQGNEVQIGQRVYTKSSLYTTLGCVLIPLGLFaSPIQTIFWLVGASA-VCVLGHGALFEPPVESA 161
                 567789*************************999999886379999****98765.56677777888777665 PP

>> DOCK_N  DOCK N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0   7.2e-05      0.32      43      76 ..       5      38 ..       2      40 .. 0.91

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 7.2e-05
      DOCK_N 43 lfdklsklieeLdlaRrqlLsgvltadelkelre 76
                 f k+s+ ++eL+++R+q Lsg  +  e  ++r+
  EPX71848.1  5 AFSKISENVQELVSSRSQYLSGFKSVGEFLDVRR 38
                599*******************999999999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       600  (0.0334653); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.43u 0.28s 00:00:00.71 Elapsed: 00:00:00.44
# Mc/sec: 1159.57
//
Query:       EPX71849.1  [L=388]
Description: 19S proteasome regulatory subunit Rpt4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.5e-43  146.6   0.0    8.7e-43  145.9   0.0    1.3  1  AAA              ATPase family associated with various cellul
      2e-10   40.3   0.1    3.8e-10   39.4   0.1    1.5  1  AAA_lid_3        AAA+ lid domain
    3.1e-08   33.4   0.5    6.1e-08   32.5   0.0    1.8  1  Prot_ATP_ID_OB   Proteasomal ATPase OB C-terminal domain
    2.1e-07   31.5   0.0    8.3e-05   23.0   0.1    2.4  2  AAA_16           AAA ATPase domain
    8.1e-07   29.1   0.3    4.8e-05   23.4   0.1    3.0  2  AAA_5            AAA domain (dynein-related subfamily)
    1.8e-06   27.8   0.0      4e-06   26.7   0.0    1.5  1  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    4.2e-05   23.7   0.0    0.00012   22.3   0.0    1.7  1  AAA_2            AAA domain (Cdc48 subfamily)
    0.00053   20.3   0.1      0.014   15.7   0.0    2.4  2  AAA_22           AAA domain
      0.001   19.6   0.0     0.0029   18.2   0.0    1.8  1  AAA_18           AAA domain
     0.0011   18.2   0.0      0.002   17.4   0.0    1.3  1  TIP49            TIP49 P-loop domain
     0.0013   18.7   0.0     0.0024   17.9   0.0    1.4  1  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
     0.0029   17.8   0.0     0.0056   16.9   0.0    1.5  1  AAA_33           AAA domain
     0.0054   16.1   0.1      0.014   14.8   0.1    1.7  1  Mg_chelatase     Magnesium chelatase, subunit ChlI
     0.0069   15.6   0.0      0.012   14.8   0.0    1.4  1  DUF815           Protein of unknown function (DUF815)
  ------ inclusion threshold ------
      0.011   15.5   0.0      0.021   14.6   0.0    1.4  1  IstB_IS21        IstB-like ATP binding protein
      0.013   15.0   0.0      0.025   14.1   0.0    1.5  1  AAA_7            P-loop containing dynein motor region
      0.021   15.2   0.0       0.04   14.3   0.0    1.5  1  RNA_helicase     RNA helicase
      0.025   14.5   0.0      0.055   13.3   0.0    1.6  1  AAA_3            ATPase family associated with various cellul
      0.031   13.6   0.0        0.2   11.0   0.0    2.3  2  ATPase           KaiC
      0.037   14.1   0.0      0.077   13.0   0.0    1.5  1  AAA_14           AAA domain
      0.042   13.3   0.1      0.075   12.5   0.1    1.3  1  PhoH             PhoH-like protein
      0.044   13.5   0.0      0.087   12.5   0.0    1.5  1  AAA_24           AAA domain
      0.046   13.3   0.1       0.11   12.1   0.1    1.5  1  AAA_25           AAA domain
      0.048   13.9   0.0       0.08   13.2   0.0    1.4  1  AAA_28           AAA domain
       0.05   13.3   0.0       0.21   11.3   0.0    2.1  1  Sigma54_activat  Sigma-54 interaction domain
       0.17   11.0   0.0       0.28   10.3   0.0    1.2  1  Parvo_NS1        Parvovirus non-structural protein NS1


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.9   0.0   1.3e-45   8.7e-43       1     132 []     169     302 ..     169     302 .. 0.95

  Alignments for each domain:
  == domain 1  score: 145.9 bits;  conditional E-value: 1.3e-45
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHH...TTCCCHHHHHHHHHHHHHHHHT CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr...sgseseeeervvnqLlteldgv 96 
                 vllyGppGtGKTlla+ava +lgv+fl++  s +++ky+ges++ ire+f  ake++ p+++f+DEida++++r    +s+++e +r++ +Ll+++dg+
  EPX71849.1 169 VLLYGPPGTGKTLLARAVAASLGVNFLKVVSSGIVDKYIGESARIIREMFGYAKEHE-PCVIFMDEIDAIGGRRfseGTSADREIQRTLMELLNQMDGF 266
                 79******************************************************8.****************986666888889************* PP

                 TTSSSTEEEEEEESSGGGSTHHHHS.TTSSEEEETTS CS
         AAA  97 kkkeskvivigatnrpdkldpallr.gRfdrkieiel 132
                 +   +++ +i+atnrpd+ldpallr gR+drkie++l
  EPX71849.1 267 DYL-GQTKIIMATNRPDTLDPALLRpGRLDRKIEVPL 302
                 **7.56****************************985 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.4   0.1   5.5e-13   3.8e-10       1      44 [.     324     367 ..     324     368 .. 0.97

  Alignments for each domain:
  == domain 1  score: 39.4 bits;  conditional E-value: 5.5e-13
   AAA_lid_3   1 dvdlkeLAerTeGySGADlaalcreAallAlrrgikeitmedfe 44 
                 d+d++++ ++T+G  GADl +++ eA++lA++++++ + ++d++
  EPX71849.1 324 DLDYEAIIKLTDGTNGADLRNVVTEAGFLAIKEDRDYVVQSDLM 367
                 89***************************************986 PP

>> Prot_ATP_ID_OB  Proteasomal ATPase OB C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.5   0.0   8.8e-11   6.1e-08       1      57 []      56     111 ..      56     111 .. 0.98

  Alignments for each domain:
  == domain 1  score: 32.5 bits;  conditional E-value: 8.8e-11
                     EEEEEEE-TTSSEEEEE-TTS-EEEEEE-GGGSSST--TTEEEEEETTTTEEEEEE- CS
  Prot_ATP_ID_OB   1 VatVsEvlddteraiVktssdeevvvslagavpremLrpgDlVavdkdtgfifEkLP 57 
                     +++V + ld  er iVk ss+  +vv +   v+ ++L +g +V++d +t  i+ +LP
      EPX71849.1  56 IGEVLKQLDP-ERFIVKASSGPRYVVGCRNNVDQSKLIQGVRVSLDMTTLTIMRILP 111
                     7899999***.*********************************************9 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.1   1.2e-07   8.3e-05      15      49 ..     157     191 ..     139     206 .. 0.89
   2 ?    5.9   0.0     0.022        15     122     163 ..     213     261 ..     208     269 .. 0.71

  Alignments for each domain:
  == domain 1  score: 23.0 bits;  conditional E-value: 1.2e-07
      AAA_16  15 alervrsgrpelvllsGesGvGKsslvrellrale 49 
                 +++rv  + p  vll+G++G+GK+ l+r+++ +l 
  EPX71849.1 157 LFHRVGINPPKGVLLYGPPGTGKTLLARAVAASLG 191
                 6888888889********************98875 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.022
      AAA_16 122 llkrllallsrderplvlvlDdlq........wadeaslqllaaLlrlle 163
                  +++++ ++++ ++p v+++D+++           +a++++ ++L++ll+
  EPX71849.1 213 IIREMFGYAKE-HEPCVIFMDEIDaiggrrfsEGTSADREIQRTLMELLN 261
                 67888899999.888*********77777555333355555555555554 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.1     7e-08   4.8e-05       1     135 [.     168     289 ..     168     291 .. 0.75
   2 ?   -1.9   0.0       4.4     3e+03      47      65 ..     354     372 ..     330     383 .. 0.74

  Alignments for each domain:
  == domain 1  score: 23.4 bits;  conditional E-value: 7e-08
                 EEEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------.G-SEEEEESGGG--HHHHHHHHHHHHSSEEE..- CS
       AAA_5   1 dvlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar.egeilvlDEveraesevlnsLlslleerrlllee 98 
                 +vlL GppGtgK+ la+ +aa l+ +++ v  + ++  + +  + +i           +  a + e++++++DE++ +    +++  s   e ++ l+e
  EPX71849.1 168 GVLLYGPPGTGKTLLARAVAASLGVNFLKVVSS-GIVDKYIGESARI-------IREMFGYAKEhEPCVIFMDEIDAIGGRRFSEGTSADREIQRTLME 258
                 59**********************999877644.3444444444443.......344444333369999999999999999999998998899999999 PP

                 SSSEEE---......-EEEEEESS--.-TT-TTHHHH CS
       AAA_5  99 ggelvkaknddllerfrviatanpldrslnelspalr 135
                 + ++++   +  l ++ +i+++n++d     l+pal+
  EPX71849.1 259 LLNQMDGFDY--LGQTKIIMATNRPD----TLDPALL 289
                 9888877665..56688999999999....7777776 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 4.4
                 -.........--------G CS
       AAA_5  47 ikngttslvdsplvraare 65 
                 ik+++   v+s l+ aar+
  EPX71849.1 354 IKEDRDYVVQSDLMSAARK 372
                 5578888999999999983 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   0.0   5.8e-09     4e-06      35      94 ..     168     235 ..     157     242 .. 0.79

  Alignments for each domain:
  == domain 1  score: 26.7 bits;  conditional E-value: 5.8e-09
      RuvB_N  35 hvllyGpPGlGkttlakiiakelgvk.lkitsgPvleka.gdlaalltnl....eekd..vlfideih 94 
                  vllyGpPG Gkt la+ +a+ lgv+ lk+ s+ +++k  g+ a ++ ++    +e++  v+f+dei 
  EPX71849.1 168 GVLLYGPPGTGKTLLARAVAASLGVNfLKVVSSGIVDKYiGESARIIREMfgyaKEHEpcVIFMDEID 235
                 69***********************9458889889888537888888776444433334599999996 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   1.7e-07   0.00012       6     104 ..     169     261 ..     165     279 .. 0.80

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 1.7e-07
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTSEEEEETGGG-------------HHHHHHHHHHHH CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegGivllDEidKihpkessgadvSregVqrdLLqile 104
                 +ll gp g+Gkt+la+a+a  l v    ++  +  s +    +     +r i +  gy +  e  ++++DEid i  ++ s+      ++qr L+ +l 
  EPX71849.1 169 VLLYGPPGTGKTLLARAVAASLGV----NFLKVVSSGIVD--KYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 261
                 6889*******************8....777776666666..23333467777788999999999************755555555679*****99986 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0     2e-05     0.014       8      29 ..     169     190 ..     165     200 .. 0.87
   2 ?    1.8   0.0      0.38   2.6e+02      78     117 ..     213     261 ..     192     279 .. 0.66

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 2e-05
      AAA_22   8 lvvtGesGtGKTtllrrlleql 29 
                 ++++G++GtGKT+l+r ++ +l
  EPX71849.1 169 VLLYGPPGTGKTLLARAVAASL 190
                 589**************99887 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.38
      AAA_22  78 llealeqalraravielliiDEaqhlr....s......eealeeLrslln 117
                 +++ +  +++++    ++  DE++ +     s       e+ ++L +lln
  EPX71849.1 213 IIREMFGYAKEHEP-CVIFMDEIDAIGgrrfSegtsadREIQRTLMELLN 261
                 45555555666666.9*********9765551555666444444444444 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   4.2e-06    0.0029       1      34 [.     169     200 ..     169     281 .. 0.67

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 4.2e-06
      AAA_18   1 IlltGtpGvGKttlakeLskrlgfgvnlrdvake 34 
                 +ll G+pG+GKt la++++ +l  gvn  +v++ 
  EPX71849.1 169 VLLYGPPGTGKTLLARAVAASL--GVNFLKVVSS 200
                 799*****************99..5555444443 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   2.9e-06     0.002      51      91 ..     167     205 ..     160     219 .. 0.86

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 2.9e-06
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  51 ravLlaGpsgtGktalaiaiskelgedvpfvalsgsevysl 91 
                 ++vLl Gp+gtGkt la a++ +lg  v f ++++s +   
  EPX71849.1 167 KGVLLYGPPGTGKTLLARAVAASLG--VNFLKVVSSGIVDK 205
                 89**********************9..99999999988655 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   3.5e-06    0.0024      20      51 ..     167     200 ..     140     215 .. 0.79

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 3.5e-06
                 EEEEEEESTTSSHHHHHHHHHHHTT--..----T CS
        TsaE  20 dvilLeGdLGaGKTtlvrglakalgve..evkSP 51 
                 + +lL+G+ G+GKT l+r++a++lgv+  +v S 
  EPX71849.1 167 KGVLLYGPPGTGKTLLARAVAASLGVNflKVVSS 200
                 349***********************98877664 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   8.1e-06    0.0056       2      39 ..     169     219 ..     169     269 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 8.1e-06
      AAA_33   2 vllvGlpGsGKstlaerllkklg...avllssdt..........lrrrlfg 39 
                 vll G+pG+GK+ la+ +++ lg     ++ss +          ++r +fg
  EPX71849.1 169 VLLYGPPGTGKTLLARAVAASLGvnfLKVVSSGIvdkyigesarIIREMFG 219
                 7899*******************5544444444455566666665555555 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.1   2.1e-05     0.014      25      44 ..     169     188 ..     160     194 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 2.1e-05
  Mg_chelatase  25 lllvGppGsGKtmlakrlps 44 
                   +ll+GppG+GKt+la+++++
    EPX71849.1 169 VLLYGPPGTGKTLLARAVAA 188
                   89*************99876 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   1.8e-05     0.012      52     116 ..     165     234 ..     123     252 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.8e-05
      DUF815  52 pannvLLwGarGtGKSslvkallneyaeegLrlie..vekedlkelpklvellr...erperfilfvDDL 116
                 p + vLL+G  GtGK  l +a+ +++  + L+++   +  + + e  ++++++    +++e +++f+D +
  EPX71849.1 165 PPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSsgIVDKYIGESARIIREMFgyaKEHEPCVIFMDEI 234
                 6678******************************655788889999999888753336778899999975 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0     3e-05     0.021      48      70 ..     167     189 ..     155     204 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 3e-05
   IstB_IS21  48 enivllGpsGvGKshlaialgve 70 
                 ++++l Gp+G+GK+ la a++ +
  EPX71849.1 167 KGVLLYGPPGTGKTLLARAVAAS 189
                 6899**************99876 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   3.6e-05     0.025      33     110 ..     166     235 ..     156     260 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 3.6e-05
       AAA_7  33 kkpvllvGptGtGKtviikdllkkldkekylsltinfsaqtsanqlqdiiesklekrrkgvygPpggkklvvFvDDln 110
                  k vll+Gp GtGKt++++ +  +l         +nf +  s+  + + i ++    r+    ++ ++ +v+F+D+++
  EPX71849.1 166 PKGVLLYGPPGTGKTLLARAVAASLG--------VNFLKVVSSGIVDKYIGESARIIREMFGYAKEHEPCVIFMDEID 235
                 5789**************99998888........88888888888888888887777765555777788888888875 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   5.8e-05      0.04       1      51 [.     169     210 ..     169     237 .. 0.65

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 5.8e-05
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkklklkkkdsvysrnpeddfwdgYtgqe 51 
                   ++lyGp+g+GK++la+ +a++l  ++          + +++ ++d+Y g+ 
    EPX71849.1 169 VLLYGPPGTGKTLLARAVAASLGVNF---------LKVVSSGIVDKYIGES 210
                   689**************888877333.........1223444444444444 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0     8e-05     0.055       2      30 ..     169     197 ..     168     204 .. 0.92

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 8e-05
       AAA_3   2 vllegvPGlaktllvkalakaldlefkri 30 
                 vll g PG++ktll++a+a +l+++f ++
  EPX71849.1 169 VLLYGPPGTGKTLLARAVAASLGVNFLKV 197
                 7999*********************9876 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00029       0.2      14      37 ..     161     184 ..     133     193 .. 0.83
   2 ?   -0.7   0.0       1.1   7.6e+02     125     160 ..     234     275 ..     199     282 .. 0.55

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00029
      ATPase  14 gGipegrvvlitGepGtGKtifal 37 
                  Gi   + vl++G pGtGKt++a 
  EPX71849.1 161 VGINPPKGVLLYGPPGTGKTLLAR 184
                 68888899*************986 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 1.1
      ATPase 125 iDsitglayeek...eavaReilrqlvrvl...kklgvTail 160
                 iD i+g   +e    + ++ ++l++l++++     lg+T i+
  EPX71849.1 234 IDAIGGRRFSEGtsaDREIQRTLMELLNQMdgfDYLGQTKII 275
                 344443322333000334445555555555222234566665 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   0.00011     0.077       5      77 ..     169     250 ..     166     270 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 0.00011
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelileklkeekktylflDEiqev............p 77 
                 +++ G+  +GKT l++ ++ +l     ++l +      dk + ++++++++++  +ke++  ++f+DEi  +            +
  EPX71849.1 169 VLLYGPPGTGKTLLARAVAASLG---VNFLKVVSSGIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIggrrfsegtsadR 250
                 7899***************9998...5666666666666555555434444444445578899******9885555555554444 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   0.00011     0.075      22      43 ..     169     190 ..     162     203 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00011
                 EEEE--TTSSTTHHHHHHHHHH CS
        PhoH  22 vfaiGpaGtGKtylavalavea 43 
                 v   Gp GtGKt+la a+a+++
  EPX71849.1 169 VLLYGPPGTGKTLLARAVAASL 190
                 6789************999875 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   0.00013     0.087       5      22 ..     169     186 ..     166     238 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00013
      AAA_24   5 iliyGpsgiGKTtlakel 22 
                 +l+yGp+g+GKT la+  
  EPX71849.1 169 VLLYGPPGTGKTLLARAV 186
                 89************9876 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   0.00015      0.11      36      56 ..     169     189 ..     161     202 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00015
      AAA_25  36 allaGapgtGKttlaldlala 56 
                 +ll+G+pgtGKt la  +a++
  EPX71849.1 169 VLLYGPPGTGKTLLARAVAAS 189
                 69************9988876 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   0.00012      0.08       2      27 ..     169     195 ..     168     242 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 0.00012
      AAA_28   2 ivitGgestGKTtlleaLaar.gypvv 27 
                 + + G+++tGKT l++a aa  g++ +
  EPX71849.1 169 VLLYGPPGTGKTLLARAVAASlGVNFL 195
                 6799***************87765544 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0    0.0003      0.21      23      46 ..     167     190 ..     156     280 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.0003
                      S-EEEECSTTSSHHHHHHHHHHHS CS
  Sigma54_activat  23 lsvlitGesGtGKellaraiheas 46 
                        vl+ G  GtGK+llara+ ++ 
       EPX71849.1 167 KGVLLYGPPGTGKTLLARAVAASL 190
                      679***************997654 PP

>> Parvo_NS1  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0    0.0004      0.28     117     137 ..     169     189 ..     163     198 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.0004
   Parvo_NS1 117 vwfyGpantGktnlaeaIaka 137
                 v++yGp+ tGkt la+a a  
  EPX71849.1 169 VLLYGPPGTGKTLLARAVAAS 189
                 89***************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (388 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       632  (0.0352502); expected 358.6 (0.02)
Passed bias filter:                      601  (0.0335211); expected 358.6 (0.02)
Passed Vit filter:                        94  (0.0052429); expected 17.9 (0.001)
Passed Fwd filter:                        26  (0.00145016); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              26  [number of targets reported over threshold]
# CPU time: 0.59u 0.30s 00:00:00.88 Elapsed: 00:00:00.45
# Mc/sec: 2572.55
//
Query:       EPX71850.1  [L=749]
Description: PX/PXA domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.7e-23   81.1   3.8    9.6e-22   77.8   1.0    2.6  2  PXA       PXA domain
    3.4e-11   43.7   0.0      2e-10   41.2   0.0    2.3  1  Nexin_C   Sorting nexin C terminal
    1.4e-05   25.0   0.1    5.3e-05   23.2   0.1    2.0  1  PX        PX domain


Domain annotation for each model (and alignments):
>> PXA  PXA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.8   1.0   1.6e-25   9.6e-22       2     180 ..      94     259 ..      93     261 .. 0.86
   2 ?    3.3   0.1     0.012        71      68     115 ..     630     686 ..     593     741 .. 0.77

  Alignments for each domain:
  == domain 1  score: 77.8 bits;  conditional E-value: 1.6e-25
         PXA   2 peldeelhellalilrdfVlsWYskissdeeFptevrsilrsviralanrlkkvDlaqllltrlldlltshlrdyrqaeekvkskkaeeesdldlaakf 100
                 +el++ l +l+  +   +++ WYs++ssd +F++ev++++  ++r++ + l++ D  ++l+ ++l+ + + l++  +  +          s+++  a+f
  EPX71850.1  94 KELEAPLLLLITKLTHHYIHGWYSHVSSDMSFVKEVENTIGYIMRNFYSYLSTQD-SSYLIFEMLKNVLNTLTLLLSDLNVFL-------SKKMPIAEF 184
                 67899999*******************************************9999.556666666666666655543333333.......4567899** PP

         PXA 101 falephpalsavlrdieeskeaelaylrslverlLslllppedlesetvrtlvreilanvvlkplleklsdPdfinqlii 180
                     p +a++++l     +k a ++ lrs + +++ +++++ed ++ ++++l+re+la  v+k++ + +++P f+n++ii
  EPX71850.1 185 AVRYPNSAVAKML-----DKAANEQALRSQASAMITKFCKSEDAACLPLHVLLREVLAMQVFKKITTHCAKPVFVNRCII 259
                 *********9888.....55667999*****************************************************8 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.012
         PXA  68 lltshlrdyrqaeekvkskkae........eesdldlaakffa..lephpalsavlrd 115
                  +++hlr  +qa++  +++ a+        +++dl l++++++   + h+a + v ++
  EPX71850.1 630 KVQEHLRNLQQAKAHENEDGANwdsapgnkDDTDLYLEEAMKNslFNSHSAFA-VQQK 686
                 5899*******99999999888999**99988888888777776666666554.2222 PP

>> Nexin_C  Sorting nexin C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.2   0.0   3.4e-14     2e-10       1     111 [.     569     730 ..     569     731 .. 0.84

  Alignments for each domain:
  == domain 1  score: 41.2 bits;  conditional E-value: 3.4e-14
     Nexin_C   1 W.lrrqaltvlkqvlqqllg...dtierwlkekiek.ltseeavaslikklrdalWPdgeskaesaperseeek......................... 69 
                 W +rr++l+vlk++l+ +     + +e++lk+++   l++++ + +  ++l  ++WP++ +++++++ r+ ++                          
  EPX71850.1 569 WfFRRTVLSVLKSLLLYGPVdvsGIVEKMLKDHVFAkLSNTQLLGDFFTSLILNIWPEE-KEKVQEHLRNLQQAkahenedganwdsapgnkddtdlyl 666
                 99*************9998889899*********999********************77.444444555555555666677777777777777777777 PP

     Nexin_C  70 ......................lrtraearklLlellpdalvsvvGrknaeealkrifellQnp 111
                                       ++ r ea++l+l+++ +  +s +G  ++ ++l+ +f+llQ++
  EPX71850.1 667 eeamknslfnshsafavqqkneEQMRVEAKELFLNNAYADNASFLGPLTSGDSLRVLFDLLQES 730
                 77777777777777777766656***************************************85 PP

>> PX  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.1   8.9e-09   5.3e-05      17     110 ..     336     423 ..     322     426 .. 0.81

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 8.9e-09
                 SSEEEEEEEEEETTS.SSEEEEEEEHHHHHHHHHHHHHHHTTSTSTSSSTSGSSSSSCTTSHHHHHHHHHHHHHHHHHHHTSCHHHHSHHHHHHH CS
          PX  17 kkhsyylyevelktg.akewtvkRrYsdFeeLhskLlrkfprvkiPplPkkvlfgsvrkkdeefiekrrkgLeeyLqrllnhpelrnsevlteFL 110
                 kk+  ++++v+ +      w v+R Ys + + +++L+++f + +  pl  +++        ++   + r+ L +yL+ +++ p l+n+ v+++F+
  EPX71850.1 336 KKNLKFIITVHSSYLdIPPWIVYRTYSSLKSMYKDLRKEFLHATGAPLMFPRWR-------NQTYGHFRQNLSAYLNGIVQVPKLSNDAVVRHFF 423
                 4444455555555544578**********************8888888877743.......6899999**************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (749 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       920  (0.0513135); expected 358.6 (0.02)
Passed bias filter:                      542  (0.0302304); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.68u 0.30s 00:00:00.98 Elapsed: 00:00:00.48
# Mc/sec: 4740.14
//
Query:       EPX71851.1  [L=193]
Description: 60S ribosomal protein L19 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.2e-61  206.1   9.2    2.2e-61  206.1   9.2    1.7  2  Ribosomal_L19e  Ribosomal protein L19e


Domain annotation for each model (and alignments):
>> Ribosomal_L19e  Ribosomal protein L19e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  206.1   9.2   1.2e-65   2.2e-61       1     143 [.       3     145 ..       3     146 .. 0.99
   2 ?   -1.5   0.8      0.13   2.3e+03      49      74 ..     156     181 ..     149     187 .. 0.61

  Alignments for each domain:
  == domain 1  score: 206.1 bits;  conditional E-value: 1.2e-65
                     -THHHHHHHHHHTTS-GGGEEE-GGGHHHHHH--SHHHHHHHHHTTSEEE-------THHHHHHHHHHHTT-S-SGGG--S-HHHHS-HHHHHHH CS
  Ribosomal_L19e   1 dlklqkrlaasvlkvGknrvwldpeeleeiaeAitredirklikdglIikkpkkgnsrararerkekkrkgrrrgsGkrkGtkeaRlpekelWik 95 
                     +l++qkrla+svlk+Gk++vw+dp+el+ei++A++r++irkl+kdgl+i+kp+ ++sr r+r+++++kr gr++g+GkrkGt+eaR+p+ ++W++
      EPX71851.1   3 NLTTQKRLASSVLKCGKRKVWMDPNELSEISNANSRQNIRKLVKDGLLIRKPNLMHSRFRIRKTHAAKRLGRHTGYGKRKGTAEARMPSAVVWMR 97 
                     5899******************************************************************************************* PP

                     HHHHHHHHHHHHHHTTSS-HHHHHHHHHHHHTT--SSHHHHHHHHT-X CS
  Ribosomal_L19e  96 riRalRrlLkelrekkkidkktYrelYrkakGgefknkavLkeyiekk 143
                     r+R+lRrlL+++re++kidk+ Y++lY  akG++fk+k++L e+i+++
      EPX71851.1  98 RQRVLRRLLRKYRESGKIDKHLYHSLYLAAKGNTFKHKRALIEHIQRA 145
                     *********************************************986 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.13
                     EE-------THHHHHHHHHHHTT-S- CS
  Ribosomal_L19e  49 ikkpkkgnsrararerkekkrkgrrr 74 
                     ++++++ ++r++a +++++k  g++r
      EPX71851.1 156 QEQQDARRARSKAARLRRAKVVGEKR 181
                     55555566666666666666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1287  (0.0717831); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.44
# Mc/sec: 1323.04
//
Query:       EPX71852.1  [L=282]
Description: Clr6 associated factor 2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-10   41.1   0.1    4.5e-10   39.7   0.0    1.7  2  SWIRM     SWIRM domain


Domain annotation for each model (and alignments):
>> SWIRM  SWIRM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0      0.37   6.7e+03      43      59 ..      68      84 ..      58      94 .. 0.68
   2 !   39.7   0.0   2.5e-14   4.5e-10       9      88 ..     210     281 ..     204     282 .] 0.87

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 0.37
       SWIRM 43 lyrenpkeyltvteaqk 59
                l+ ++ + +l++++++ 
  EPX71852.1 68 LWLQQERIWLRKEHVKP 84
                56666677777777744 PP

  == domain 2  score: 39.7 bits;  conditional E-value: 2.5e-14
       SWIRM   9 dslhpiEkellselfngkdktpeeYlkiRnkiialyr..enpkeyltvteaqkalkrrrltgidvnllsrihefLerwGlIN 88 
                 + lhp E++l+s+l+      + +Yl+ +++i+a+++  ++    +++t+aq+a +       dvn++sr+++++++ G+++
  EPX71852.1 210 HLLHPAEVHLASTLR----LPCSVYLDNKRRIFAEWHyrKQQGLGFRKTDAQRASR------VDVNKASRLWKAFHEEGFFD 281
                 789************....*****************944445667899***77777......6*************999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (282 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       477  (0.0266049); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.21s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 2232.02
//
Query:       EPX71853.1  [L=464]
Description: ubiquitin carboxy terminal hydrolase Ubp16 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.5e-55  186.2   1.1    9.5e-55  185.9   1.1    1.1  1  UCH             Ubiquitin carboxyl-terminal hydrolase
    8.2e-24   84.8   5.4      3e-23   82.9   5.4    1.8  1  UCH_1           Ubiquitin carboxyl-terminal hydrolase
     0.0067   16.1   1.6       0.31   10.8   0.5    3.2  3  zinc_ribbon_10  Predicted integral membrane zinc-ribbon metal
  ------ inclusion threshold ------
      0.045   14.0   0.2       0.12   12.7   0.2    1.6  1  PSCyt3          Protein of unknown function (DUF1588)
       0.09   12.5   0.2        0.2   11.4   0.0    1.6  2  DUF3287         Protein of unknown function (DUF3287)
       0.13   11.8   7.7        3.1    7.2   7.7    3.0  1  Peptidase_C98   Ubiquitin-specific peptidase-like, SUMO isope
       0.36   10.9   3.6       0.15   12.1   0.5    2.0  2  DZR             Double zinc ribbon


Domain annotation for each model (and alignments):
>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  185.9   1.1   3.7e-58   9.5e-55       2     257 .]     129     429 ..     128     429 .. 0.91

  Alignments for each domain:
  == domain 1  score: 185.9 bits;  conditional E-value: 3.7e-58
                 EES-SSSTHHHHHHHHHHHTSHHHHHHHHTCHHCCSSTCCCCC-.TT.TTS.TTHHHHHHHHHHHHHHSH-CCEE--HHHHHHHHHHSGGGTSSSTCEH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH   2 GlsNlGntCymnsvlQcLfsipelrdyllsleevkkesrnkkelnesnplgkkgelakalkdlfkellkskskavsPkklkktlsklaksfsgykqqDa 100
                 Gl+NlGntC+mnsvlQ+++++p+l++ylls +++ + + n+         ++++++a+a+ +      +++ +a++P+ +  +l+ +a++f+ y+q+Da
  EPX71853.1 129 GLVNLGNTCFMNSVLQLMTHTPPLAQYLLSVQHSIACRLNS-----CVLCKMEQQVARAFPNKG----AKRGSAFKPSGIQGMLKVIASHFRPYRQEDA 218
                 9*****************************65555554443.....223344445555554444....7899*************************** PP

                 HHHHHHHHHHHHHHHCCHCCCHHHHHHCCCTTSHHHHHH-EEEEE...................................................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...................................................... RF
         UCH 101 qEflaflLdqlhedlnrevaeekwkkhlkrndslitdlfegqlks...................................................... 145
                 +Ef++ l+d +++++ +   + k+ +h +r++s+++++f+g l++                                                      
  EPX71853.1 219 HEFMRCLVDAWQKSCLQ---NYKNLDHPSRETSVVHRIFGGYLRQqilcsvckkpsntyqalldlsieakdssmldclkhfvqaeklvkqnryrcsnck 314
                 **************999...56778999*********************************************************************** PP

                 .......EEEEEEB-SEEEEEEESEEETEE.EEE--SEEB--SEEE-GGGBSS-BTTS-TCS-BEEEEEEEEEES.CTTSEEEEEEEECTTTTEEEEEE CS
                 .......xxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxx RF
         UCH 146 .......klklkrlPeiLiihlkRfsynss.ksKlntkvefpeeldlssylaeekkkkteekkkYeLiavvvHsG.slssGHYvayiknekngkWykyd 235
                        ++++ r+P+iL+ih+kRf++n   +sK+ +++++pe+ dl++y+++ +++     ++YeLi+v+vH G s++sGHY++++k ++ng W+k+d
  EPX71853.1 315 klvdatkTMTVYRAPNILTIHFKRFTFNGYsSSKIGKHINYPERFDLAPYMSDPSRS-----CRYELIGVLVHAGgSTRSGHYYSFCK-SSNGMWLKFD 407
                 ****************************999********************955554.....67***********9************.88999***** PP

                 TTEEEEE-HHCCCTT.CEEEEEE CS
                 xxxxxxxxxxxxxxx.xxxxxxx RF
         UCH 236 Detvkevkeeeevls.sayiLfY 257
                 De v++++ +  vl+ +ayiL Y
  EPX71853.1 408 DEFVSNSSID-RVLNqQAYILQY 429
                 ********77.77777*****99 PP

>> UCH_1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.9   5.4   1.2e-26     3e-23       2     317 ..     129     408 ..     128     411 .. 0.84

  Alignments for each domain:
  == domain 1  score: 82.9 bits;  conditional E-value: 1.2e-26
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1   2 GLEnhivnsYlNslLQvlyfipplrnlalshlak.eckkehcLlcElgflf....dmldkakglncqasnFlralssipeasalglileeeeetekssa 95 
                 GL n  +++++Ns+LQ++ ++ppl + +ls + + +c  ++c+lc +   +         ++g+  + s  +  l+ i   s ++ +++e+++      
  EPX71853.1 129 GLVNLGNTCFMNSVLQLMTHTPPLAQYLLSVQHSiACRLNSCVLCKMEQQVarafPNKGAKRGSAFKPSGIQGMLKVIA--SHFRPYRQEDAH------ 219
                 899999**************************999**********9987776543445555599************999..999999777533...... PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xx RF
       UCH_1  96 islssliqsfnrflldqlekelketkknsseeesaieqllgtkaettirclkCgseksrksstlvldlkyPkpsnekkeakvtfasilkssler...ek 191
                 + ++ l++ +++  l++ ++   ++     +e+s +++++g  + ++i c+ C++ ++  + +l l++ +         +++++ ++lk++++     k
  EPX71853.1 220 EFMRCLVDAWQKSCLQNYKNLDHPS-----RETSVVHRIFGGYLRQQILCSVCKKPSNTYQALLDLSIEA---------KDSSMLDCLKHFVQAeklVK 304
                 3567788888888888877766664.....57999****************************9998844.........45799*********955557 PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 192 ttrawCekCkryqpteqrktvknlPpvLalnakleeeeelelwktknwlpleiklsldedknleeklkeerekakaekeikvYeLqsvvvhigdskesg 290
                 ++r+ C++Ck+    +++ tv + P++L+++ k+++ +        ++ +++i+ +++  + ++      +   ++++++  YeL++v vh g s+ sg
  EPX71853.1 305 QNRYRCSNCKKLVDATKTMTVYRAPNILTIHFKRFTFN--------GYSSSKIGKHINYPERFDL-----APYMSDPSRSCRYELIGVLVHAGGSTRSG 390
                 99*******************************99666........6667777666665443333.....3335666999*************9999** PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 291 hLvslvkvaekelerdppesqWylFND 317
                 h++s++k          +++ W++F+D
  EPX71853.1 391 HYYSFCKS---------SNGMWLKFDD 408
                 *******5.........2469*****9 PP

>> zinc_ribbon_10  Predicted integral membrane zinc-ribbon metal-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0     0.063   1.6e+02      20      36 ..     259     275 ..     254     281 .. 0.86
   2 !   10.8   0.5   0.00012      0.31      28      53 ..     292     316 ..     290     317 .. 0.90
   3 ?   -0.8   0.0      0.51   1.3e+03      28      36 ..     396     404 ..     394     412 .. 0.77

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.063
  zinc_ribbon_10  20 ryalICskChshnGlap 36 
                     r+ + Cs C++ +++++
      EPX71853.1 259 RQQILCSVCKKPSNTYQ 275
                     67899******999984 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00012
  zinc_ribbon_10  28 ChshnGlapkeeleevkyrCpkCgal 53 
                     C +h+ +a ++  ++ +yrC++C+ l
      EPX71853.1 292 CLKHFVQA-EKLVKQNRYRCSNCKKL 316
                     99999999.9999999*******986 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 0.51
  zinc_ribbon_10  28 ChshnGlap 36 
                     C+s+nG+  
      EPX71853.1 396 CKSSNGMWL 404
                     ******975 PP

>> PSCyt3  Protein of unknown function (DUF1588)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.2   4.5e-05      0.12      17      80 ..     244     319 ..     235     323 .. 0.67

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 4.5e-05
      PSCyt3  17 eeetspvkR..gkwvreklLceklppppanvp.....elkeeeeee.......lttrerlea....hrsaeaCasCHelidp 80 
                 ++ets+v+R  g ++r+++Lc+  ++p ++ +     ++++    +       l  ++ ++a    ++++ +C++C +l+d 
  EPX71853.1 244 SRETSVVHRifGGYLRQQILCSVCKKPSNTYQalldlSIEA----KdssmldcL--KHFVQAeklvKQNRYRCSNCKKLVDA 319
                 5789*****999***************99996334332222....222345442..4333331111345556****999986 PP

>> DUF3287  Protein of unknown function (DUF3287)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   7.9e-05       0.2      22      71 ..     186     236 ..     165     246 .. 0.81
   2 ?   -3.9   0.0       4.2   1.1e+04      58      77 ..     300     319 ..     296     324 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 7.9e-05
     DUF3287  22 lflssprdFerasvkfphaaf.kylppkdkeealdfidkvvekHrrlcder 71 
                 ++   +  F++++++   +++  ++ p  +e a +f+  +v+  ++ c++ 
  EPX71853.1 186 KGAKRGSAFKPSGIQGMLKVIaSHFRPYRQEDAHEFMRCLVDAWQKSCLQN 236
                 45668999******9877765279************************975 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 4.2
     DUF3287  58 dkvvekHrrlcderqklgkk 77 
                 +k+v++ r +c + +kl   
  EPX71853.1 300 EKLVKQNRYRCSNCKKLVDA 319
                 68899999999988888655 PP

>> Peptidase_C98  Ubiquitin-specific peptidase-like, SUMO isopeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   7.7    0.0012       3.1     163     248 ..     302     408 ..     131     424 .. 0.60

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0012
  Peptidase_C98 163 lnAvhlapCnkCkkk.eqrrkmvlekvpsvlmlHFv....eGLphndlek...ysfef..........egkqYsvtaviqY...kkelkHFvtwir 237
                    l   +   C++Ckk  + +++m++ + p++l++HF     +G +++++ k   y  +f          ++++Y++  v+     +++  H+ ++++
     EPX71853.1 302 LVKQNRYRCSNCKKLvDATKTMTVYRAPNILTIHFKrftfNGYSSSKIGKhinYPERFdlapymsdpsRSCRYELIGVLVHaggSTRSGHYYSFCK 397
                    33445668****996266899**************644447999998875222333331122222222468899988887755568889******* PP

  Peptidase_C98 238 nsdgsWlecDD 248
                    +s+g+Wl++DD
     EPX71853.1 398 SSNGMWLKFDD 408
                    **********9 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1       2.3   5.8e+03      29      37 ..     168     176 ..     153     183 .. 0.66
   2 ?   12.1   0.5   5.7e-05      0.15      11      43 ..     260     322 ..     256     326 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 2.3
         DZR  29 drCpsCgek 37 
                 + C+ C+ +
  EPX71853.1 168 NSCVLCKME 176
                 557667655 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 5.7e-05
         DZR  11 darfCseCgtklkavaa..............................edrCpsCgekvdpear 43 
                 +++ Cs C+++ + ++a                               +rC++C++ vd++++
  EPX71853.1 260 QQILCSVCKKPSNTYQAlldlsieakdssmldclkhfvqaeklvkqnRYRCSNCKKLVDATKT 322
                 5679*******999999****************************************999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (464 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       778  (0.0433934); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.60u 0.25s 00:00:00.85 Elapsed: 00:00:00.46
# Mc/sec: 3029.86
//
Query:       EPX71854.1  [L=576]
Description: choline transmembrane transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.1e-15   56.8  39.2    2.1e-15   56.8  39.2    2.3  2  Choline_transpo  Plasma-membrane choline transporter


Domain annotation for each model (and alignments):
>> Choline_transpo  Plasma-membrane choline transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    1.9   2.6    0.0058     1e+02      33      75 ..     197     239 ..     147     253 .. 0.68
   2 !   56.8  39.2   1.2e-19   2.1e-15       3     324 ..     256     551 ..     254     553 .. 0.82

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.0058
  Choline_transpo  33 kaiksnpslllvplltllllllvsafwivvavalylassgest 75 
                       ++   + ++lv++  +l++ll++a+ +++++ +yl  ++++ 
       EPX71854.1 197 AFLAIAWLIFLVAVPQFLVFLLAVAPISMFFFSIYLLNASKIH 239
                      3444445566666666677777777888888778866666554 PP

  == domain 2  score: 56.8 bits;  conditional E-value: 1.2e-19
  Choline_transpo   3 llivavllllllivlrkrirlaiallkvaskaiksnpslllvplltllllllvsafwivvavalylassgestdkvnsgsesglaavefesssk 96 
                      ll+++++   ++++ ++r  ++  ++k+a+++i+++p+++lv + +l+ + +++++w+ ++++l+l +s+          ++g+    + s+++
       EPX71854.1 256 LLLFTLICSTYIWRHWSRFATSFNIVKLACRVISDIPQIVLVFISFLVSFYILIFVWVRLFARLFLRGSS----------FVGS---VWVSPKS 336
                      78999************************************99999999999999999999999955553..........3444...68899** PP

  Choline_transpo  97 vkalllyllfgllWtleflralqqvtvagavasWYfskkkdlp.skfp..vlkslkraltyhlGSialgSlilaivqll.rlileylekklkkk 186
                       ++l+ ++ f +lW++ fl+ lq  +++++v++W+f ++ + + +k +  v + ++ +l +h G + l+Sl+   ++++  ++ ++l++     
       EPX71854.1 337 SWILASFYAFHFLWLCVFLNSLQCAILSSIVSQWFFYRNTRMTaTK-TnlVAHFFSDVLYNHYGLCSLSSLLRVTTKVPlHFLPRWLRHT---- 425
                      *************************************333333433.24699*******************9666666504444543222.... PP

  Choline_transpo 187 enavakcllcclkcclwclekf..lkflnrnayimvaiyGksFcesakdafellkrngl.rvavldsvvdfvlflgkllialltgliaylllka 277
                                  + +  +++++      +  a+ + +iy+ ++++++k   ++ + n +      + ++++ l++ + + a+++g++a+ +   
       EPX71854.1 426 -----------SHLVYYMFTSVsaSYVASPLALAYASIYSIPYMNASKALSQIEQLNRVnLRRRCYYLSKYTLLVARSVLAVGVGVTAWNFSI- 507
                      ...........22222233333214457888******************9999888887433345569*******************995544. PP

  Choline_transpo 278 tltnpeelnsplvpllvvfiiayliasiflsvyesavdtifvcfaeD 324
                        +++  + + +++ ++++++a+li  ++   +++ vd++++c ++D
       EPX71854.1 508 --HSNG-IFYGYLVGILGGFLAWLIIGVIEGGLSMLVDALLICSIID 551
                      ..5554.889999*******************************999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (576 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       896  (0.0499749); expected 358.6 (0.02)
Passed bias filter:                      290  (0.0161749); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 4149.75
//
Query:       EPX71855.1  [L=327]
Description: 19S proteasome regulatory subunit Rpn8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-32  111.8   0.1    3.9e-32  111.0   0.1    1.4  1  MitMem_reg  Maintenance of mitochondrial structure and functi
    3.9e-30  104.3   0.0    7.6e-30  103.3   0.0    1.4  1  JAB         JAB1/Mov34/MPN/PAD-1 ubiquitin protease


Domain annotation for each model (and alignments):
>> MitMem_reg  Maintenance of mitochondrial structure and function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.0   0.1   4.4e-36   3.9e-32       1     112 []     175     296 ..     175     296 .. 0.95

  Alignments for each domain:
  == domain 1  score: 111.0 bits;  conditional E-value: 4.4e-36
  MitMem_reg   1 Eaeeigvehllkpsiqdas.stlstglnrqyyslkilqerldlikdYlkkveegelpvnheilrnlqkllnllPhlet..........eelekefnvet 88 
                 Eaeeigvehll+ +++d s +tl+t++++q +sl++l +rl +i dYl+kv+ g+lp nh+il +lq ++nllP++ +           e +++fn + 
  EPX71855.1 175 EAEEIGVEHLLR-DTRDVSvGTLATRVTQQAQSLQGLGQRLTEIADYLRKVVGGQLPLNHAILAELQGVFNLLPNVFSgpvsseqvlqTEAQRAFNINS 272
                 9***********.9999*********************************************************88887777777776679999***** PP

  MitMem_reg  89 nDvllvvyLasltrsilalnelle 112
                 nD+l+++y++s++r+++al++ll+
  EPX71855.1 273 NDQLMSIYISSIVRAVIALHDLLD 296
                 *********************985 PP

>> JAB  JAB1/Mov34/MPN/PAD-1 ubiquitin protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.3   0.0   8.5e-34   7.6e-30       4     118 .]      17     127 ..      15     127 .. 0.97

  Alignments for each domain:
  == domain 1  score: 103.3 bits;  conditional E-value: 8.5e-34
                 CEEEEEHHHHHHHHHHHHHHHHHT.S--EEEEEEEESSSEEEEEEEEEEESEEEESSECEEEEEHHHHHHHHHHHHHHHCTTSEEEEEEEESSSS-SS- CS
         JAB   4 qavhleslvllkildhalrtekee.eevmGlliGelnddttveitnvfalpfeetekdvdavsldqeylekksellkklrgrervvGWYhshpditvwl 101
                 q+v++++lvll+ +d + r ++ + ++v+G+l+G+ n+  +v++ n++a+pfee+ek+ ++++ld++++e+++e++kk++++e+++GWYh++p++    
  EPX71855.1  17 QHVIVHPLVLLSAVDSYIRSAQGTkRRVVGILLGQNNGT-VVNVANSYAIPFEEDEKNSSVWFLDHNFMESMNEMFKKINANEKLIGWYHTGPQL---- 110
                 89****************99998878*************.*******************************************************.... PP

                 -HHHHHHHHHHHHHSTT CS
         JAB 102 sevdvrtqalyqrmdee 118
                 +++d+++++l+++++++
  EPX71855.1 111 RPSDLEINNLLKKYIPN 127
                 ************99885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       842  (0.046963); expected 358.6 (0.02)
Passed bias filter:                      608  (0.0339115); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2409.44
//
Query:       EPX71856.1  [L=300]
Description: guanine nucleotide transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.5e-27   95.3   2.1    4.2e-15   55.5   0.2    3.3  3  Mito_carr  Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.0   1.1e-05      0.19       5      45 ..      12      52 ..       8     105 .. 0.68
   2 !   26.6   0.0   2.3e-10   4.1e-06       6      95 ..     122     202 ..     117     204 .. 0.86
   3 !   55.5   0.2   2.3e-19   4.2e-15       3      95 ..     209     297 ..     207     299 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 1.1e-05
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSC CS
   Mito_carr  5 vlkellaGglagavatlvttPldvvKtrlqtqkksskksks 45
                 +++++ ++ ag+++ ++ +P+d++  rl+++ ++ ++ ++
  EPX71856.1 12 QVARVAGAASAGILELSLFHPVDTISKRLMSNHGRVTSLNQ 52
                567888999*********************98777655443 PP

  == domain 2  score: 26.6 bits;  conditional E-value: 2.3e-10
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   6 lkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                 + +  aG+l g++  ++  Pldv+K++ qt+++  k ++      v+ +i+ +e + +lyrG++ +  r+ap s++ f+ + + k++++k
  EPX71856.1 122 IMHATAGSLVGIG-EIFLLPLDVLKIKRQTNPEAFKGRG------VF-RILADEKF-ALYRGWGWTAARNAPGSFALFGGNAFAKEYIFK 202
                 5677889998876.77889****************9854......44.67777777.9****************************9987 PP

  == domain 3  score: 55.5 bits;  conditional E-value: 2.3e-19
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   3 lsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                  +++++++++ ++++++ +v +Pldv+Ktr+q+++  + +s+    + +lk+++k eG++++++Gl+p+ll + p+ +  f++ +tl+ ++ k
  EPX71856.1 209 ATFIQNFFTSIAGASASLIVSAPLDVIKTRIQNKSFDNPASG----FTILKNMVKYEGFTSFFKGLTPKLLTTGPKLVFSFTMAQTLIPFFDK 297
                 67999****9999999*******************9999875....789************************************99998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (300 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       321  (0.017904); expected 358.6 (0.02)
Passed bias filter:                      290  (0.0161749); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.45
# Mc/sec: 2023.84
//
Query:       EPX71857.1  [L=695]
Description: RNA-binding protein Mcp2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-37  124.1   6.9    1.9e-06   27.2   0.0    8.5  8  PUF       Pumilio-family RNA binding repeat


Domain annotation for each model (and alignments):
>> PUF  Pumilio-family RNA binding repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.5   0.1    0.0037        66      12      35 .]     368     391 ..     365     391 .. 0.87
   2 !   22.3   0.0   3.8e-09   6.8e-05       6      32 ..     398     424 ..     394     426 .. 0.88
   3 !   27.2   0.0   1.1e-10   1.9e-06       4      31 ..     432     458 ..     429     462 .. 0.82
   4 !    2.9   0.0    0.0058     1e+02      12      25 ..     476     489 ..     474     492 .. 0.89
   5 !   19.8   0.0   2.4e-08   0.00043       2      35 .]     506     539 ..     505     539 .. 0.95
   6 !   10.0   0.0   3.1e-05      0.55       5      25 ..     545     565 ..     541     575 .. 0.77
   7 !   14.1   0.0   1.5e-06     0.027       6      28 ..     582     604 ..     578     611 .. 0.79
   8 !   19.0   0.0   4.2e-08   0.00076       7      30 ..     627     650 ..     624     655 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.0037
                 STTHHHHHHHHHHHSCHHHHHHHH CS
         PUF  12 dqyGnyvvQkllehateeqkklil 35 
                 dq  + ++Q+ l++a++e k+ i+
  EPX71857.1 368 DQQSSIFLQQKLKMASPEIKQAII 391
                 6777889*************9886 PP

  == domain 2  score: 22.3 bits;  conditional E-value: 3.8e-09
                 HHHHHTSTTHHHHHHHHHHHSCHHHHH CS
         PUF   6 lvqLstdqyGnyvvQkllehateeqkk 32 
                  + L+ +++Gn+++Q+++eh t+ q++
  EPX71857.1 398 ACPLMLNRFGNFLIQRCFEHGTPHQIR 424
                 578*****************9988875 PP

  == domain 3  score: 27.2 bits;  conditional E-value: 1.1e-10
                 GGHHHHHTSTTHHHHHHHHHHHSCHHHH CS
         PUF   4 gnlvqLstdqyGnyvvQkllehateeqk 31 
                 gn  +L+td++G++vvQk ++    e++
  EPX71857.1 432 GNMYKLATDPFGCHVVQKAFDN-IDEDI 458
                 7899*****************5.44444 PP

  == domain 4  score: 2.9 bits;  conditional E-value: 0.0058
                 STTHHHHHHHHHHH CS
         PUF  12 dqyGnyvvQklleh 25 
                 + y+++v Qkl+e+
  EPX71857.1 476 HHYACHVWQKLFET 489
                 569*********96 PP

  == domain 5  score: 19.8 bits;  conditional E-value: 2.4e-08
                 HGGGHHHHHTSTTHHHHHHHHHHHSCHHHHHHHH CS
         PUF   2 ikgnlvqLstdqyGnyvvQkllehateeqkklil 35 
                 +kg++++ +   +G+ vvQ+++e ++e++k++++
  EPX71857.1 506 LKGKWHEVALGENGSLVVQNMFENCVEKDKQDCI 539
                 799****************************985 PP

  == domain 6  score: 10.0 bits;  conditional E-value: 3.1e-05
                 GHHHHHTSTTHHHHHHHHHHH CS
         PUF   5 nlvqLstdqyGnyvvQklleh 25 
                 +l  ++  q+Gn+v+Q++ e 
  EPX71857.1 545 HLDLIVRGQWGNWVIQHMVEN 565
                 56667778*********9996 PP

  == domain 7  score: 14.1 bits;  conditional E-value: 1.5e-06
                 HHHHHTSTTHHHHHHHHHHHSCH CS
         PUF   6 lvqLstdqyGnyvvQkllehate 28 
                  +++s+dqy++ v++k ++  + 
  EPX71857.1 582 ATEYSVDQYASKVMEKAIKFGPR 604
                 5799**************95444 PP

  == domain 8  score: 19.0 bits;  conditional E-value: 4.2e-08
                 HHHHTSTTHHHHHHHHHHHSCHHH CS
         PUF   7 vqLstdqyGnyvvQkllehateeq 30 
                 +++++dqyGny++Q++++ a +++
  EPX71857.1 627 IDIASDQYGNYLIQQIIQLAQPSD 650
                 789**************9776666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (695 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       797  (0.0444531); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.27s 00:00:00.89 Elapsed: 00:00:00.43
# Mc/sec: 4822.32
//
Query:       EPX71858.1  [L=422]
Description: transcription factor TFIIH complex subunit Ssl1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-85  284.2   0.2    6.7e-85  283.8   0.2    1.2  1  Ssl1        Ssl1-like
    5.3e-20   71.4  15.7    5.3e-20   71.4  15.7    2.8  3  C1_4        TFIIH C1-like domain
      2e-14   54.2   0.0    3.7e-14   53.3   0.0    1.4  1  VWA_2       von Willebrand factor type A domain
      5e-06   26.9   0.0    7.2e-06   26.4   0.0    1.2  1  VWA         von Willebrand factor type A domain
  ------ inclusion threshold ------
       0.21   12.0   0.0       0.37   11.2   0.0    1.4  1  PhoR        Phosphate regulon sensor protein PhoR
        8.7    6.7  25.3      0.077   13.2  10.6    3.0  2  IBR         IBR domain, a half RING-finger domain


Domain annotation for each model (and alignments):
>> Ssl1  Ssl1-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  283.8   0.2   2.2e-88   6.7e-85       1     193 []      92     287 ..      92     287 .. 0.99

  Alignments for each domain:
  == domain 1  score: 283.8 bits;  conditional E-value: 2.2e-88
                 EEE-SGGGGSSSSSS-HHHHHHHHHHHHHHHHHHHSTT-EEEEEEEETTEEEEEEEEES-HHHHHHHHHHHTTS---S---HHHHHHHHHHHHSSS-TT CS
        Ssl1   1 vlDlsrameekdlkpsrlavviklleefveeffdqnPisqlgliavkdkkaekltelsGnprkhikaLkslreveakgepsLqnaLelalasLkkvpsh 99 
                 vlDls amee+d++++r++++ik++ efv e+f+qnPisql++i vkd++a+++++l+Gnp++hi++Lkslr  e++g +sLqnaLe+a+asL++++sh
  EPX71858.1  92 VLDLSSAMEERDFHHKRFELQIKYAVEFVMEYFEQNPISQLSIIGVKDGIAQRISDLHGNPQSHIQKLKSLR--ECNGSFSLQNALEMARASLSHIASH 188
                 89**********************************************************************..************************* PP

                 SEEEEEEEE-SS----SS-HHHHHHHHHHTT-EEEEEEESS--HHHHHHHHHTTT....TEEEE-SHHHHHHHHHHHHS--------.----EEEEE-- CS
        Ssl1 100 asrevliifsslstcDPgdiyetidelkkekirvsvigLsaevavckelaketkg....tysvvldethlkelllehvsPppaaksk.keaslikmGfP 193
                 ++revliif+s+ ++DPgdi++t+d+l++++irv+++gL+aeva+c+e++ +t++    +y+vvl+e+h++ell+e+++Pp++++sk ++ sl++mGfP
  EPX71858.1 189 GTREVLIIFGSIFSSDPGDIFRTVDALVSDQIRVQIVGLAAEVAICREICDRTNSsstnAYGVVLSEQHFRELLMESTIPPATNSSKtADSSLVMMGFP 287
                 ******************************************************768999************************9997899*******9 PP

>> C1_4  TFIIH C1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   2.3      0.51   1.5e+03      26      36 ..     309     319 ..     299     326 .. 0.84
   2 ?   -2.5   1.4       2.1   6.3e+03      24      32 ..     321     329 ..     312     333 .. 0.73
   3 !   71.4  15.7   1.8e-23   5.3e-20       1      55 []     364     419 ..     364     419 .. 0.93

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.51
        C1_4  26 yrCekCkndFC 36 
                 ++C++C+ + C
  EPX71858.1 309 FHCPRCRAKVC 319
                 89*****9999 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 2.1
        C1_4  24 sryrCekCk 32 
                 +  +C++Ck
  EPX71858.1 321 LPIECPSCK 329
                 556899998 PP

  == domain 3  score: 71.4 bits;  conditional E-value: 1.8e-23
        C1_4   1 eCygCqkkfpklakkkkdee.ltssryrCekCkndFCiDCDvFiHesLHnCpGCes 55 
                 +C++Cq  fpk+ + +++++ ++s+r++C++Ck +FCiDCD+F He+LH+C GC++
  EPX71858.1 364 HCFACQVPFPKASEASDQDQaASSMRFECPSCKLHFCIDCDIFAHEQLHECFGCQC 419
                 6**********9998777664899******************************96 PP

>> VWA_2  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.3   0.0   1.2e-17   3.7e-14       1     105 [.      89     198 ..      89     200 .. 0.86

  Alignments for each domain:
  == domain 1  score: 53.3 bits;  conditional E-value: 1.2e-17
       VWA_2   1 lvfvlDtSgSmrngdygptrleaakdaveallk....slpgdrvglvtfsdg.pevlipltkdkakilnalrnleakgggtnlaaaLqlarkalkkrrk 94 
                 +v+vlD S  m+++d++ +r+e + + + +++     ++p ++++++ ++dg ++++++l+ +++++ ++l++l++++g  +l++aL++ar+ l++  +
  EPX71858.1  89 MVLVLDLSSAMEERDFHHKRFELQIKYAVEFVMeyfeQNPISQLSIIGVKDGiAQRISDLHGNPQSHIQKLKSLRECNGSFSLQNALEMARASLSHIAS 187
                 79**************999888775544333332333779***********8469999***************************************99 PP

       VWA_2  95 gekrvivlitD 105
                 + +r++++i++
  EPX71858.1 188 HGTREVLIIFG 198
                 99999999875 PP

>> VWA  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   0.0   2.4e-09   7.2e-06       2     140 ..      89     228 ..      88     264 .. 0.89

  Alignments for each domain:
  == domain 1  score: 26.4 bits;  conditional E-value: 2.4e-09
                 EEEEEE-STTSCHHHHH......HHHHHHHHHHHHHTBTTTTEEEEEEEESSS.EEEEEETTSHCHHHHHHHHHHTGSGGGGSSC-HHHHHHHHHHHHH CS
         VWA   2 ivfvlDgSgsmgeenfe......kvkefikklveklevgpegtrvglvqfsse.vktefslndysskeellsalnnlkysgggttntgkalkyaleklf 93 
                 +v+vlD S+ m+e++f+      ++k +++ ++e +e +++  +++++   +  ++ + +l    + ++ +++l++l+  +g+ + +  al+ a+ +l 
  EPX71858.1  89 MVLVLDLSSAMEERDFHhkrfelQIKYAVEFVMEYFE-QNPISQLSIIGVKDGiAQRISDLHG--NPQSHIQKLKSLRECNGSFS-LQNALEMARASLS 183
                 79***********************************.888899*******996666677777..679********988888888.************* PP

                 HHHGTSSTTSEEEEEEEESS--CS.SHTHHHHHHHHGCTEEEEEEEES CS
         VWA  94 kssagaRenakkviilltdGksnd.gdpkeaaneakeqgikvfavGvg 140
                 + +++   +++ v+i++ +  s+d gd+ ++++ + +++i+v +vG  
  EPX71858.1 184 HIASH---GTREVLIIFGSIFSSDpGDIFRTVDALVSDQIRVQIVGLA 228
                 *****...**************9988******************9983 PP

>> PhoR  Phosphate regulon sensor protein PhoR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00012      0.37      26      62 ..     326     362 ..     316     365 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00012
        PhoR  26 laallllalllllawhlyqllrLsrWLrkpkklepPd 62 
                 ++  l+l+l  +la+ +++l+ L++W++ p + +p +
  EPX71858.1 326 PSCKLVLILSTHLARSYHHLFPLKNWIDLPWSAKPTS 362
                 5666899********************9998887765 PP

>> IBR  IBR domain, a half RING-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   6.8       1.3   3.9e+03      38      50 ..     302     320 ..     233     331 .. 0.78
   2 ?   13.2  10.6   2.6e-05     0.077      15      62 .]     359     414 ..     346     419 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.3
         IBR  38 s......vtCskCgfefCf 50 
                 s       +C++C+ + C+
  EPX71858.1 302 SlpsrggFHCPRCRAKVCT 320
                 1555555789999999996 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 2.6e-05
         IBR  15 dpnlkwCprpdCeaiiekseg.cks.........vtCskCgfefCfnCkkewHegl.sC 62 
                 +p+  +C    C+ ++ k ++ + +          +C++C+  fC++C   +He+l +C
  EPX71858.1 359 KPTSSHCF--ACQVPFPKASEaS-DqdqaassmrFECPSCKLHFCIDCDIFAHEQLhEC 414
                 57788999..8999995555531.223455665577*****************987676 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (422 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       942  (0.0525406); expected 358.6 (0.02)
Passed bias filter:                      541  (0.0301746); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.45
# Mc/sec: 2813.22
//
Query:       EPX71859.1  [L=845]
Description: ribosome biogenesis protein Rix1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-45  154.6   5.8    2.4e-45  154.6   5.8    2.0  2  RIX1      rRNA processing/ribosome biogenesis


Domain annotation for each model (and alignments):
>> RIX1  rRNA processing/ribosome biogenesis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  154.6   5.8   1.3e-49   2.4e-45       2     185 ..      14     205 ..      13     208 .. 0.96
   2 ?   -2.1   0.7      0.15   2.7e+03      96     127 ..     330     359 ..     282     393 .. 0.51

  Alignments for each domain:
  == domain 1  score: 154.6 bits;  conditional E-value: 1.3e-49
        RIX1   2 lrvllnrLsst..ppkelpsilstlashkllceellkselee....lvhklvtrilsLlqskspegrwaGvcLakvtveesgeellssgstWlrallsi 94 
                 l++++++Ls++  ++k+lp  ++++a+ +l +++++   ++e    +  +++t+++ +l+ k+ + rw ++ L+ +t+++s+e+l+ +g tW++ l+++
  EPX71859.1  14 LSLVKSWLSTSfpNEKTLPLQIPIIADILLKQKCIKNLGSSEqgllVRSNWCTSLTRMLHHKDFKLRWSAIILIDCTISQSWECLIDHGVTWIKLLIQL 112
                 899**********9******************99999888889999999************************************************** PP

        RIX1  95 LekpdppavlelaistlsriftltrgkptltREiltpnlpkfitallqlleee...letvlealstllplhPttfRpfankirslllsllasse 185
                 L++p+ p +le+aist+s+if   +gkp +tRE++tpnl++fita+l++ e +   let++ +l+++l +h  tfRpf++ i++l++++l+++e
  EPX71859.1 113 LNRPELPRTLESAISTVSKIFISSSGKPGITRELVTPNLSSFITACLRVGE-TgkcLETIFVCLYQILIHHAPTFRPFSSSIKNLCIEVLEEHE 205
                 ***************************************************.5599**********************************9876 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.15
        RIX1  96 ekpdppavlelaistlsriftltrgkptltRE 127
                  +++ ++++e ++++l  +f  + ++ tl  E
  EPX71859.1 330 LSSSVKSTIENSVQAL--LFMVLPHLHTLANE 359
                 2223344444444443..23333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (845 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1477  (0.0823805); expected 358.6 (0.02)
Passed bias filter:                      495  (0.0276089); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.74u 0.28s 00:00:01.02 Elapsed: 00:00:00.44
# Mc/sec: 5706.27
//
Query:       EPX71860.1  [L=197]
Description: metal dependent phosphohydrolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.5e-43  146.5   0.5    7.6e-43  146.3   0.5    1.1  1  HD_3      HD domain
    2.9e-11   43.5   0.5    3.6e-11   43.2   0.5    1.2  1  HD_2      HD containing hydrolase-like enzyme
    4.1e-06   27.0   1.0    6.9e-06   26.3   1.0    1.4  1  HD        HD domain


Domain annotation for each model (and alignments):
>> HD_3  HD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  146.3   0.5   1.3e-46   7.6e-43       2     152 ..      15     164 ..      14     176 .. 0.91

  Alignments for each domain:
  == domain 1  score: 146.3 bits;  conditional E-value: 1.3e-46
        HD_3   2 ekLKfqkRqgwlqtgrvreesvaeHmwrvalmalllseelkekvdiarvikmfLiHDlvEiltgDiispdelakeekeeeekeaaerilkl.lpee... 96 
                  kLK+++R+gwl +g++ +es+a+Hm+r+ +++ll++++    ++++r++k +++HDl+E+++gDi+++++++keek++ e ea+++i+k  +p++   
  EPX71860.1  15 SKLKSTPRTGWLYHGIETPESIADHMYRMGILTLLCNDSG---INKDRCVKIAIVHDLAESIVGDITPHENVSKEEKHRLEMEAMNKITKEiIPSDlam 110
                 79**********************************8776...9*********************************************9757777666 PP

        HD_3  97 laeellalweEFeeretkeakfakdlDklepllqalekegdslaafeaklsqvygv 152
                  aee+++l+ E+e ++t eakf+kd+Dk+e+l q++e+e+++      +lsq+   
  EPX71860.1 111 NAEEIKDLFLEYEHASTSEAKFVKDIDKFEMLAQMFEYEKKYQGTK--DLSQFSWA 164
                 67**************************************998755..77777766 PP

>> HD_2  HD containing hydrolase-like enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.2   0.5     6e-15   3.6e-11       2     146 ..      10     150 ..       9     183 .. 0.78

  Alignments for each domain:
  == domain 1  score: 43.2 bits;  conditional E-value: 6e-15
        HD_2   2 FfallsrlkyieRwalmrn..treenvaeHslevaliahalalienkkfggkldaerlallalyHDasEiitGDlptpvKyanpeireaykevEeeaee 98 
                 F++++s+lk   R +  +    ++e++a+H +++ ++    +l+ n+     ++ +r++++a++HD++E i+GD+  p   +++  +e+ +++E ea +
  EPX71860.1  10 FLETISKLKSTPRTGWLYHgiETPESIADHMYRMGIL----TLLCNDS---GINKDRCVKIAIVHDLAESIVGDIT-P---HENVSKEEKHRLEMEAMN 97 
                 999**********88777644899*********9875....4566755...89*********************95.4...444556677788888777 PP

        HD_2  99 klle.lLpeelr...eeyeell.adeeaeeeekklvkaaDklsalikcleelk 146
                 k+++  +p++l    ee+++l+ + e+a+++e k+vk  Dk + l +++e +k
  EPX71860.1  98 KITKeIIPSDLAmnaEEIKDLFlEYEHASTSEAKFVKDIDKFEMLAQMFEYEK 150
                 7765157888871124455556458888899*************999988665 PP

>> HD  HD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.3   1.0   1.2e-09   6.9e-06       3     121 ..      38     141 ..      36     142 .. 0.63

  Alignments for each domain:
  == domain 1  score: 26.3 bits;  conditional E-value: 1.2e-09
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHTS..HHHHHH..CTCCHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHTTCCHHHHHHHH CS
          HD   3 eHsleVaklarrlaedlgeeedrellllaaLlHDiGkgpfgdafekkeee..fekflaHekvgaeilrevekrlgld.ledvaklirehheswegkkrp 98 
                 +H++++  l+  l++d g   ++++++++a+ HD+++  +gd     +e+  +e+ +  e ++  ++ ++ +++  d ++++ ++    +e +      
  EPX71860.1  38 DHMYRMGILT-LLCNDSG--INKDRCVKIAIVHDLAESIVGDITP--HENvsKEEKHRLEMEAMNKITKEIIPS--DlAMNAEEIKDLFLEYE------ 123
                 6777776555.899999*..*********************9333..344332232333333333444444444..33333333333333333...... PP

                 HHHHCCTSCHHHHHHHHHHHHHH CS
          HD  99 rglaerqlslearivklaDrlaa 121
                       + ++ea+ vk++D++++
  EPX71860.1 124 -----HASTSEAKFVKDIDKFEM 141
                 .....4678***********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       867  (0.0483574); expected 358.6 (0.02)
Passed bias filter:                      468  (0.026103); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1440.92
//
Query:       EPX71861.1  [L=395]
Description: CMP/dCMP deaminase family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.7e-26   90.9   0.1    1.1e-25   89.9   0.1    1.5  1  Inv-AAD          Invertebrate-AID/APOBEC-deaminase
    1.7e-22   79.2   0.1    2.5e-22   78.7   0.1    1.2  1  dCMP_cyt_deam_1  Cytidine and deoxycytidylate deaminase zinc-
    1.1e-17   64.4   0.0    1.6e-17   63.8   0.0    1.3  1  Methyltransf_16  Lysine methyltransferase
    1.3e-06   28.2   0.0      2e-06   27.6   0.0    1.3  1  MafB19-deam      MafB19-like deaminase
    0.00095   19.0   0.0     0.0027   17.5   0.0    1.8  2  Methyltransf_31  Methyltransferase domain
  ------ inclusion threshold ------
      0.021   14.7   0.1      0.073   13.0   0.1    1.8  1  APOBEC_N         APOBEC-like N-terminal domain
      0.059   13.5   0.0       0.14   12.2   0.0    1.6  1  APOBEC3          APOBEC3
      0.082   13.1   0.0       0.27   11.4   0.0    1.8  2  Myb_DNA-bind_2   Rap1 Myb domain


Domain annotation for each model (and alignments):
>> Inv-AAD  Invertebrate-AID/APOBEC-deaminase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.9   0.1   5.1e-29   1.1e-25       3     126 ..     274     386 ..     272     389 .. 0.87

  Alignments for each domain:
  == domain 1  score: 89.9 bits;  conditional E-value: 5.1e-29
     Inv-AAD   3 vlvdadkneilatGytleleGnthaeqccliklaekhevaeeklaevlpkntvlYttmepCskRlsGnlpCveRilklkeaiktvyvGvkePekfvaen 101
                 vlv  +++ei++tGy+ el+Gnthae+c+++k  +++       ++ l k t++Y tmepCskRlsG+++C++ i++  ++i tv +G +eP++fv+  
  EPX71861.1 274 VLV--QHGEIVSTGYSRELPGNTHAEECAIMKYLSQQP-----YGSSL-KGTMIYSTMEPCSKRLSGKKSCTDLIIS--QNISTVVLGSREPDTFVKC- 361
                 444..5799***********************876654.....45555.46889*******************9986..579**************86. PP

     Inv-AAD 102 kgrkkleeagievvhvegledeile 126
                 +g   l+++g+++++  +++d+ l+
  EPX71861.1 362 EGVDLLKNSGVNIIEELSFQDDCLK 386
                 699***********99999999886 PP

>> dCMP_cyt_deam_1  Cytidine and deoxycytidylate deaminase zinc-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.7   0.1   1.1e-25   2.5e-22       3     100 ..     247     351 ..     245     352 .. 0.97

  Alignments for each domain:
  == domain 1  score: 78.7 bits;  conditional E-value: 1.1e-25
                      HHHHHHHHHHHHHHHHH.TTTSCSEEEEEEETTEEEEEEESBHHCCTGTTB-HHHHHHHHHHHH.T.SSCETTEEEEEEE--BHH.......HH CS
  dCMP_cyt_deam_1   3 kdekllelalkaakeaq.kcsnfkVGavivkngeiistgyngepaggsktiHAEvnAilkaakn.g.gsklegatlyvtlePCsm.......Ca 86 
                      +++ l+  al++ak+++ ++s f +G+v+v++gei+stgy++e +g++   HAE +Ai+k++++ + gs+l+g+++y t+ePCs+       C+
       EPX71861.1 247 NHKALMYAALEEAKKCEpTDSAFCIGSVLVQHGEIVSTGYSRELPGNT---HAEECAIMKYLSQqPyGSSLKGTMIYSTMEPCSKrlsgkksCT 337
                      5899********************************************...*************98******************99******** PP

                      HHHHHHT-SEEEEE CS
  dCMP_cyt_deam_1  87 kaiiqsgikkvvvg 100
                      ++ii  +i++vv+g
       EPX71861.1 338 DLIISQNISTVVLG 351
                      ***********986 PP

>> Methyltransf_16  Lysine methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.8   0.0   7.2e-21   1.6e-17       3     168 ..      47     215 ..      45     221 .. 0.81

  Alignments for each domain:
  == domain 1  score: 63.8 bits;  conditional E-value: 7.2e-21
  Methyltransf_16   3 dekeLkieedtg......esigrkvWdaavvlvkylekklakelganelsklsvlELGsG.tGlvGlavaellpeakviltDleellellkkni 89 
                      de++L+i+++ +       s g +vW+ ++  v +l k++   + ++ +s++svlELGsG +G+ G+ +       + i tD+++ l+ l++n+
       EPX71861.1  47 DEHKLHIKQNRQtlhqlpGSTGSVVWKTSISIVPWLIKQS--WFANTLSSDVSVLELGSGiSGIGGILLGPR--VNRYIATDQNDYLKGLRENL 136
                      556666665433112111489*****************75..5678899***********66******9999..566788************** PP

  Methyltransf_16  90 elnknalkskvkvevLdWgeeleedllekeevDlilaaDcvYledslelLvkvLkellkkesk..vlvaykkr.reaekkFf 168
                      + n+   +s+v+v++LdW ++  e+  +  ++D+    Dc+Y+ +  + Lv+++    +  ++  +lv  + r  e+ ++F+
       EPX71861.1 137 DQNG---ASTVEVSELDWTNPPSEKEWKDMSLDILCLFDCIYNPNLNTHLVSTMASFARLFPDltCLVGQELRdPETLTDFL 215
                      **88...99*********************************************9988877665577776666344445555 PP

>> MafB19-deam  MafB19-like deaminase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   0.0   9.1e-10     2e-06       2     126 ..     247     384 ..     246     391 .. 0.79

  Alignments for each domain:
  == domain 1  score: 27.6 bits;  conditional E-value: 9.1e-10
  MafB19-deam   2 dkekafrkalaevekatkiked.kigavivkdkkviargsnekelnakataHaEiaalqqAa.kklkskrlddatlyvtlepCd.......mCagaiv 90 
                  ++++ +  al+e++k  + ++   ig v v+ ++++ +g+ ++        HaE  a+++   ++  ++ l+++++y t epC+        C  +i+
   EPX71861.1 247 NHKALMYAALEEAKKCEPTDSAfCIGSVLVQHGEIVSTGYSRE---LPGNTHAEECAIMKYLsQQPYGSSLKGTMIYSTMEPCSkrlsgkkSCTDLII 341
                  6788888899999998888876369****************44...36778*********7515556788*************744444447****** PP

  MafB19-deam  91 qaglkklvygagnpks......lnkLkvkekngrvelv.eddc 126
                    ++ ++v g+ +p++      +  Lk +  n+  el  +ddc
   EPX71861.1 342 SQNISTVVLGSREPDTfvkcegVDLLKNSGVNIIEELSfQDDC 384
                  ***************9888888666666666665555566666 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   1.2e-06    0.0027       2     108 ..      93     201 ..      92     233 .. 0.85
   2 ?   -2.6   0.0       1.9   4.3e+03      99     119 ..     273     291 ..     241     317 .. 0.64

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 1.2e-06
  Methyltransf_31   2 dkglrvlDlGCGtGeltfelae.elgpkaevvGiDiseeaielArenaqklgldnveFeqgdiee.lekl.ledekfDlilsnevl...nalad 89 
                      +++++vl+lG+G + ++  l   +++    ++  D + + ++  ren++++g + ve+++ d+++  +++ ++d + D+++ ++ +   n+ ++
       EPX71861.1  93 SSDVSVLELGSGISGIGGILLGpRVNR---YIATDQN-DYLKGLRENLDQNGASTVEVSELDWTNpPSEKeWKDMSLDILCLFDCIynpNLNTH 182
                      68999*******999999999544443...9999976.789************************877789************99999999999 PP

  Methyltransf_31  90 pdkileeiervlkpggill 108
                      + +++ +  r++ + + l+
       EPX71861.1 183 LVSTMASFARLFPDLTCLV 201
                      9999998888876665555 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.9
  Methyltransf_31  99 rvlkpggilliedprllaelp 119
                      +vl ++g+++++ ++  +elp
       EPX71861.1 273 SVLVQHGEIVSTGYS--RELP 291
                      455556666655555..5555 PP

>> APOBEC_N  APOBEC-like N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   3.3e-05     0.073      34      93 ..     283     341 ..     255     395 .] 0.67

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 3.3e-05
                 EEEEEEEE-..SS.....TBCHHHHHHHHHHHHT--.TTEEEEEEEEESS-S-HH.......HHHHHH CS
    APOBEC_N  34 kkGvLrnqsgaaa.....skHaEelflediedqelrepkkkyeitlYvswsPChessde...Caekla 93 
                 ++G+        +     ++HaEe+ +++  +q+ +  ++    ++Y+++ PC +       C + + 
  EPX71861.1 283 STGY--------SrelpgNTHAEECAIMKYLSQQPY-GSSLKGTMIYSTMEPCSKRLSGkksCTDLII 341
                 3444........03344469*****99985555555.588888899*******994433555655543 PP

>> APOBEC3  APOBEC3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   6.4e-05      0.14       7      65 ..     269     328 ..     264     342 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 6.4e-05
     APOBEC3   7 ylvykvkleklsalvrgyfkn.kekkHAEerfidkirslnldslkqykitcylswsPcpk 65 
                 +++  v +++++  ++gy ++   + HAEe++i k  s++ + +     ++y +  Pc+k
  EPX71861.1 269 FCIGSVLVQHGEIVSTGYSRElPGNTHAEECAIMKYLSQQPYGSSLKGTMIYSTMEPCSK 328
                 55556777888888888888866799********************************86 PP

>> Myb_DNA-bind_2  Rap1 Myb domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       3.9   8.7e+03       8      22 ..      15      28 ..      14      31 .. 0.73
   2 ?   11.4   0.0   0.00012      0.27       6      37 ..     294     324 ..     291     330 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 3.9
  Myb_DNA-bind_2  8 eeDaailkyvkeker 22
                    eeD+ +l +v +k++
      EPX71861.1 15 EEDVQVLFAV-HKKK 28
                    8999999999.4443 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00012
  Myb_DNA-bind_2   6 teeeDaailkyvkekerspasvkGnkiwkele 37 
                     t++e  ai+ky+  ++ +++s kG+ i+  +e
      EPX71861.1 294 THAEECAIMKYL-SQQPYGSSLKGTMIYSTME 324
                     899*********.777788************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (395 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       504  (0.0281109); expected 358.6 (0.02)
Passed bias filter:                      480  (0.0267723); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2842.15
//
Query:       EPX71862.1  [L=307]
Description: CCR4-Not complex subunit Not2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-31  108.9   0.9    2.9e-31  108.3   0.9    1.3  1  NOT2_3_5  NOT2 / NOT3 / NOT5 family


Domain annotation for each model (and alignments):
>> NOT2_3_5  NOT2 / NOT3 / NOT5 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.3   0.9   1.6e-35   2.9e-31       3     131 .]     175     297 ..     173     297 .. 0.90

  Alignments for each domain:
  == domain 1  score: 108.3 bits;  conditional E-value: 1.6e-35
    NOT2_3_5   3 llnspdsedaekprqyep..klphptsisypqeplyeklesakklekldedtLFyiFYysqgtleqllAakeLkkrsWryhkelktWflreekeepkek 99 
                  ++sp++e ++k+   ep  klp++    y++       ++ +k+ +++++tLFyiFY++++++ q++Aa+eL++r+Wr+hke ++W++  ++++p + 
  EPX71862.1 175 NMSSPWAELNTKKPISEPpfKLPEC----YKSVD---PPSQLSKIIQFSDETLFYIFYTKPQDILQEAAAQELTNRNWRFHKEFRVWLTPVPGTKPLQR 266
                 6789999999888778888999999....95544...356778999***************************************************** PP

    NOT2_3_5 100 teeyekgsYkyFD.yetWlkrrkkdfkleyekL 131
                 t+++e+g Y++FD   +W+++r kdf l y+ L
  EPX71862.1 267 TPQFERGYYMIFDpV-HWKRIR-KDFLLMYAAL 297
                 *************66.******.*****99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (307 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       365  (0.0203581); expected 358.6 (0.02)
Passed bias filter:                      280  (0.0156172); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 2284.46
//
Query:       EPX71863.1  [L=516]
Description: DNAJ domain-containing protein Mdj1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.1e-32  111.7   0.0    4.1e-32  111.3   0.0    1.1  1  DnaJ_C          DnaJ C terminal domain
    5.1e-23   81.0   4.0    1.1e-22   79.9   4.0    1.6  1  DnaJ            DnaJ domain
    1.3e-11   44.6  13.6    2.5e-11   43.8  13.6    1.5  1  DnaJ_CXXCXGXG   DnaJ central domain
     0.0018   18.2   8.8       0.24   11.4   1.0    2.7  2  Anti-TRAP       Tryptophan RNA-binding attenuator protein inh
  ------ inclusion threshold ------
       0.96    9.5   3.1       0.89    9.6   0.8    2.2  2  ADK_lid         Adenylate kinase, active site lid


Domain annotation for each model (and alignments):
>> DnaJ_C  DnaJ C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.3   0.0   1.1e-35   4.1e-32       2     148 .]     206     429 ..     205     429 .. 0.96

  Alignments for each domain:
  == domain 1  score: 111.3 bits;  conditional E-value: 1.1e-35
                 EEEEEE-HHHHHH-.EEE.EEEE........................................................................TEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx.................................................................xxxxxxxx RF
      DnaJ_C   2 eveleisleelykGktkkikikrnvi.................................................................kkekktle 35 
                 ev+l+i++ e++kG++k++ ++  ++                                                                 ++e+kt++
  EPX71863.1 206 EVSLNIDFMEAVKGVKKDVVYSVSSTcsschgsglqtgahrstcfackgsghrlhfippsmhmqstcdvcggsgttipsssacrscsgsgnVRERKTIS 304
                 799*****************99888899**************************************************************999999*** PP

                 EEE-TT--TT-EEEETT-SS......SS......S---EEEEEEE---SS-EEETTEEEEEEEEEHHHHHHTEEEEEE-SS-EEEEEE...--TT-EEE CS
                 xxxxxxxxxxxxxxxxxxxx......xxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxx RF
      DnaJ_C  36 vkipaGikdgqkirlegeGd......eeg....gepGDlivtikvkphpvFkrkgndlyveveislaeallGgklevptldgkvklki...tqpgevlr 121
                 ++ipaGi+d++ +r+ g G+      +       +pGDl+ t++v++h++F+r+gn++++++++++++a+lGg++++ptl+g+v+l++   t +g+ ++
  EPX71863.1 305 LDIPAGIDDNTVLRVVGAGNdaatakA-ApdakSRPGDLYATVRVRKHQFFSRQGNNVLYRAKVPMTTAALGGTIRIPTLTGEVDLRVppgTVSGDRIT 402
                 ********************9988762.146789***********************99999************************************* PP

                 ETT-S-EET...TEE--EEEEEEEE-- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      DnaJ_C 122 ikgkGmpklkkpgkrGdlyvevkvefP 148
                 + gkG+ ++    ++G++y+ ++v++P
  EPX71863.1 403 MTGKGIRNVSGIARYGNFYIDFEVNTP 429
                 *************************99 PP

>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.9   4.0   3.1e-26   1.1e-22       1      63 []      79     140 ..      79     140 .. 0.98

  Alignments for each domain:
  == domain 1  score: 79.9 bits;  conditional E-value: 3.1e-26
                 HHHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHHHHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ   1 dyYeiLgvskdasedeIkkaYrklalkyHPDknpkdpeaeekFkeineAyevLsdpekRkqYD 63 
                 d+Y+ Lgvsk+as +eIk+aY+kla++yHPD n  d++a+ekF  i++Aye L+dpek+k++D
  EPX71863.1  79 DPYKTLGVSKNASPKEIKSAYYKLAKQYHPDAN-PDKSAQEKFVDIKQAYELLQDPEKKKAFD 140
                 78*******************************.8889***********************99 PP

>> DnaJ_CXXCXGXG  DnaJ central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.8  13.6     7e-15   2.5e-11       1      67 []     232     295 ..     232     295 .. 0.85

  Alignments for each domain:
  == domain 1  score: 43.8 bits;  conditional E-value: 7e-15
  DnaJ_CXXCXGXG   1 CkkCkGsgakkgk.kktCktCkGsGvvreeqktlgpfvqqsqstCpeCeGtGkvikekdkCkkCkGkg 67 
                    C++C+Gsg ++g+ ++tC +CkGsG+ r    ++ p  +++qstC+ C+G+G++i +++ C++C+G+g
     EPX71863.1 232 CSSCHGSGLQTGAhRSTCFACKGSGH-RL---HFIPPSMHMQSTCDVCGGSGTTIPSSSACRSCSGSG 295
                    ********998655999********4.22...3555555789************************86 PP

>> Anti-TRAP  Tryptophan RNA-binding attenuator protein inhibitory protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   1.4   0.00015      0.55      11      40 ..     230     256 ..     226     260 .. 0.86
   2 !   11.4   1.0   6.8e-05      0.24      10      41 ..     269     296 ..     266     308 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00015
                 EE-TTTTTTSEETTE......E-TTTTTSS CS
   Anti-TRAP  11 tkCdaCngsGkiepeeprasleCPkCsGkg 40 
                  +C  C+gsG   ++ +r+   C +C+G g
  EPX71863.1 230 STCSSCHGSGLQTGA-HRS--TCFACKGSG 256
                 68*************.776..699999987 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 6.8e-05
                 EEE-TTTTTTSEETTE......E-TTTTTSSE CS
   Anti-TRAP  10 EtkCdaCngsGkiepeeprasleCPkCsGkgl 41 
                   +Cd C gsG   p     s  C  CsG g 
  EPX71863.1 269 QSTCDVCGGSGTTIPS----SSACRSCSGSGN 296
                 579*********9999....889******986 PP

>> ADK_lid  Adenylate kinase, active site lid
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.8   0.00025      0.89       1      29 [.     246     277 ..     246     279 .. 0.81
   2 ?   -2.8   0.1       1.9   6.8e+03       2      10 ..     289     297 ..     288     315 .. 0.50

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00025
                 EEE-TTT--EEETT.TB--S..STTB-TTT-- CS
     ADK_lid   1 RrvCpkCGrsYhvv.fnpPk..veglCDkCGe 29 
                 R +C +C+ s h+  f+pP       CD+CG+
  EPX71863.1 246 RSTCFACKGSGHRLhFIPPSmhMQSTCDVCGG 277
                 7899999999995546***7557889*****8 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.9
                 EE-TTT--E CS
     ADK_lid   2 rvCpkCGrs 10 
                 r C+ +G +
  EPX71863.1 289 RSCSGSGNV 297
                 445555543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (516 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       825  (0.0460148); expected 358.6 (0.02)
Passed bias filter:                      561  (0.0312901); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.41
# Mc/sec: 3765.91
//
Query:       EPX71864.1  [L=217]
Description: CUE domain-containing protein Cue1/4 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.9e-09   36.4   0.0    6.5e-09   35.3   0.0    1.6  1  CUE        CUE domain
  ------ inclusion threshold ------
       0.25   11.4   1.1       0.54   10.3   1.1    1.5  1  Cue1_U7BR  Ubc7p-binding region of Cue1
          1    9.1   5.5        1.7    8.3   5.5    1.3  1  G2BR       E3 gp78 Ube2g2-binding region (G2BR)


Domain annotation for each model (and alignments):
>> CUE  CUE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.0   1.1e-12   6.5e-09       1      37 [.      47      82 ..      47      84 .. 0.96

  Alignments for each domain:
  == domain 1  score: 35.3 bits;  conditional E-value: 1.1e-12
                CHHHHHHHHHHSTTS-HHHHHHHHHHCTTTHHHHHHH CS
         CUE  1 reqmletLkemFPdldeevIravLrasngnvEatina 37
                ++++++++k++FP++++  I+++L +++g+v++ti++
  EPX71864.1 47 NSEQVNMIKSVFPNIESVAIAYDL-QKTGSVDTTIEN 82
                689*********************.**********97 PP

>> Cue1_U7BR  Ubc7p-binding region of Cue1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   1.1   9.1e-05      0.54      25      42 ..     194     211 ..     183     215 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 9.1e-05
   Cue1_U7BR  25 eRKkylvwkARknmekrL 42 
                  RK  ++  ARk me+++
  EPX71864.1 194 RRKEEMIIAARKRMEQKI 211
                 69**************97 PP

>> G2BR  E3 gp78 Ube2g2-binding region (G2BR)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   5.5   0.00029       1.7       4      23 ..     187     206 ..     184     209 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00029
        G2BR   4 ERQRMLvqRKEdLLqqARRR 23 
                 ER      RKE+++  AR+R
  EPX71864.1 187 EREELFRRRKEEMIIAARKR 206
                 56666668***********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       814  (0.0454013); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1578.19
//
Query:       EPX71865.1  [L=778]
Description: ubiquitin-protein ligase E3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.7e-11   43.6   9.1    5.6e-11   42.6   9.1    1.6  1  zf-RING_2     Ring finger domain
    1.6e-08   34.7   6.9    4.1e-08   33.4   6.9    1.7  1  zf-rbx1       RING-H2 zinc finger domain
    1.3e-06   28.1   8.6    1.3e-06   28.1   8.6    1.8  1  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
    5.7e-06   26.1   8.0    1.4e-05   24.8   8.0    1.7  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
    2.2e-05   24.1   4.6    2.2e-05   24.1   4.6    1.8  1  zf-RING_11    RING-like zinc finger
     0.0002   21.2   7.6     0.0004   20.3   7.6    1.5  1  zf-RING_5     zinc-RING finger domain
    0.00024   20.7   5.5    0.00042   19.9   5.5    1.3  1  Zn_ribbon_17  Zinc-ribbon, C4HC2 type
    0.00036   20.3   6.6    0.00065   19.5   6.6    1.4  1  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
    0.00075   19.5   3.2     0.0016   18.4   3.2    1.5  1  zf-ANAPC11    Anaphase-promoting complex subunit 11 RING-H2 f
     0.0035   17.1   2.9     0.0072   16.1   2.9    1.5  1  zf-Nse        Zinc-finger of the MIZ type in Nse subunit
     0.0043   16.9   6.2     0.0096   15.8   6.2    1.6  1  Prok-RING_4   Prokaryotic RING finger family 4
  ------ inclusion threshold ------
      0.017   15.1   2.3      0.046   13.8   2.3    1.8  1  zf-C3H2C3     Zinc-finger
      0.047   13.7   8.3       0.11   12.6   8.3    1.6  1  zf-RING_UBOX  RING-type zinc-finger
        0.3   11.3   7.6       0.64   10.2   7.6    1.6  1  RINGv         RING-variant domain
       0.73   10.2  11.4      0.062   13.6   6.7    1.7  1  zf-RING-like  RING-like domain
       0.78    9.7   3.6        2.1    8.3   3.6    1.8  1  zf-C3HC4_5    Zinc finger, C3HC4 type (RING finger)
        2.5    8.1   6.9        9.9    6.2   6.9    2.0  1  Prok-RING_1   Prokaryotic RING finger family 1
        8.3    6.4  10.7        4.1    7.4   7.1    2.2  2  PHD           PHD-finger


Domain annotation for each model (and alignments):
>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.6   9.1   5.6e-14   5.6e-11       1      44 []     712     757 ..     712     757 .. 0.91

  Alignments for each domain:
  == domain 1  score: 42.6 bits;  conditional E-value: 5.6e-14
   zf-RING_2   1 deCpICleelssadsvlll.pCgHvfhreClerwlrssst.CPlCr 44 
                 ++C ICle+++++  +++l  C+H++h++C+++wl++ ++ CPlCr
  EPX71865.1 712 NTCLICLEPFERDVLCRRLkNCKHFYHKDCVDQWLTTGNNsCPLCR 757
                 58********99888887768*************9998888****9 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.4   6.9   4.1e-11   4.1e-08       9      55 .]     709     757 ..     706     757 .. 0.91

  Alignments for each domain:
  == domain 1  score: 33.4 bits;  conditional E-value: 4.1e-11
     zf-rbx1   9 eleeacieckapgdee..cpvvlGeCgHaFHlhCiskWlkt.rkvCPlcr 55 
                 +++++c+ c +p +++  c     +C+H +H++C+++Wl+t +++CPlcr
  EPX71865.1 709 AVNNTCLICLEPFERDvlCRRLK-NCKHFYHKDCVDQWLTTgNNSCPLCR 757
                 67899*****9999999888777.*****************99******8 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.1   8.6   1.3e-09   1.3e-06       2      40 .]     714     756 ..     713     756 .. 0.88

  Alignments for each domain:
  == domain 1  score: 28.1 bits;  conditional E-value: 1.3e-09
  zf-C3HC4_2   2 CpiCldmlkdpsvvt...pCgHvfCqkCilrsLeekn.eCPlC 40 
                 C iCl+ ++  +      +C+H ++++C++++L+ +n +CPlC
  EPX71865.1 714 CLICLEPFERDVLCRrlkNCKHFYHKDCVDQWLTTGNnSCPLC 756
                 ********9976443444******************99***** PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   8.0   1.4e-08   1.4e-05       1      41 []     714     756 ..     714     756 .. 0.98

  Alignments for each domain:
  == domain 1  score: 24.8 bits;  conditional E-value: 1.4e-08
                 -TTT-S--SS-E....E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepn...elleCkHsfCskCirkilksrkkvkCPlC 41 
                 C iCle ++  +   +l +CkH ++++C++++l   ++++CPlC
  EPX71865.1 714 CLICLEPFERDVlcrRLKNCKHFYHKDCVDQWLT-TGNNSCPLC 756
                 99********************************.99999**** PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   4.6   2.2e-08   2.2e-05       2      29 .]     714     742 ..     713     742 .. 0.91

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 2.2e-08
  zf-RING_11   2 CsICLeefkpgq.alfilpCsHtFHfkCI 29 
                 C ICLe+f+++  ++++  C+H +H +C+
  EPX71865.1 714 CLICLEPFERDVlCRRLKNCKHFYHKDCV 742
                 *********9886778888*********7 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   7.6     4e-07    0.0004       2      43 ..     714     757 ..     713     758 .. 0.89

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 4e-07
   zf-RING_5   2 CnkCfeklskeek..fyltsCgHifCekClkkll.ekeavCpiCr 43 
                 C +C e++ +++     l +C+H+++++C+++ l + ++ Cp+Cr
  EPX71865.1 714 CLICLEPF-ERDVlcRRLKNCKHFYHKDCVDQWLtTGNNSCPLCR 757
                 9*******.44445589***************999*********9 PP

>> Zn_ribbon_17  Zinc-ribbon, C4HC2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   5.5   4.2e-07   0.00042       4      46 ..     711     754 ..     708     764 .. 0.81

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 4.2e-07
  Zn_ribbon_17   4 lksCayCelavkgrvvlc...gvCeHvlHasCarewfenddlaeCp 46 
                   +++C +C  + ++ v+ c   ++C+H  H++C+++w+++++ ++Cp
    EPX71865.1 711 NNTCLICLEPFERDVL-CrrlKNCKHFYHKDCVDQWLTTGN-NSCP 754
                   6789999888887754.423368******************.9998 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   6.6   6.5e-07   0.00065       2      45 ..     711     758 ..     710     762 .. 0.88

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 6.5e-07
                 GSB-TTTSSS.BS-EEETT...EEEEEE-HHHHHHHHH.TT-B-TTT-- CS
  zf-C3HC4_3   2 deeCviCler.prnvvllp...CgHlvlCeeCaekllk.rkkkCpiCrr 45 
                 +++C+iCle  +r+v++ +   C+H+ + ++C++++l   +++Cp+Cr+
  EPX71865.1 711 NNTCLICLEPfERDVLCRRlknCKHF-YHKDCVDQWLTtGNNSCPLCRS 758
                 689******8688888875667****.99********99*********7 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   3.2   1.6e-06    0.0016      31      79 ..     710     758 ..     706     763 .. 0.78

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 1.6e-06
                 TTS--TTCSTTTTTS-EE..EBTTS-EEEHHHHHHHHHHHSTSSB-TTTSS CS
  zf-ANAPC11  31 fdGtcpsckfpGddcplv..lGkckhnfhlhcilkwletetskglcpmcrq 79 
                  + tc  c  p +   l   l +ckh +h+ c+ +wl t   ++ cp+cr 
  EPX71865.1 710 VNNTCLICLEPFERDVLCrrLKNCKHFYHKDCVDQWLTT--GNNSCPLCRS 758
                 57788888888766555422678**************86..5689****96 PP

>> zf-Nse  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   2.9   7.2e-06    0.0072       9      56 ..     709     756 ..     703     757 .. 0.90

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 7.2e-06
                 BXXSB-TTTSSB-SSEEEES...SS--EEEHHHHHHHCTTTS-EE-SCCC- CS
      zf-Nse   9 rislkCPltlqpfeePvtsk...kCpHvFEreaIlelikrkktvkCPvagC 56 
                 +++ +C + l+pfe+ v  +   +C+H++ ++ + + + ++    CP+  C
  EPX71865.1 709 AVNNTCLICLEPFERDVLCRrlkNCKHFYHKDCVDQWL-TTGNNSCPL--C 756
                 68999************8877779**************.99999***9..7 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   6.2   9.7e-06    0.0096       1      39 [.     714     759 ..     714     765 .. 0.74

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 9.7e-06
  Prok-RING_4   1 CvlCgeq....ekkailepCgHlvCkeCfdsk...dlssCPlCqrr 39 
                  C++C e        ++l+ C+H   k+C d++    ++sCPlC++r
   EPX71865.1 714 CLICLEPferdVLCRRLKNCKHFYHKDCVDQWlttGNNSCPLCRSR 759
                  667766543223346899**************665556******87 PP

>> zf-C3H2C3  Zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   2.3   4.6e-05     0.046      17      34 ..     733     756 ..     731     757 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 4.6e-05
   zf-C3H2C3  17 CkHlvHakCade......evCPkC 34 
                 CkH +H++C+d+      + CP+C
  EPX71865.1 733 CKHFYHKDCVDQwlttgnNSCPLC 756
                 **********96333333679999 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   8.3   0.00011      0.11       1      39 []     714     754 ..     714     756 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00011
  zf-RING_UBOX   1 CpIClelft.....dPlvl.pCGHtFCreClwelskslegafkCP 39 
                   C ICle+f+     +   l +C H ++++C+   +    g+ +CP
    EPX71865.1 714 CLICLEPFErdvlcRR--LkNCKHFYHKDCV--DQWLTTGNNSCP 754
                   99******97443222..448**********..444555566665 PP

>> RINGv  RING-variant domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   7.6   0.00064      0.64       1      48 []     714     756 ..     714     756 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00064
                 ETTTTEE-SSSS--B-SS--STCCCSB-HHHHHHHHHHTCT-SB-TTT CS
       RINGv   1 CriCleeeeeseplispCkCrGslklvHesClekWldekeantqCeiC 48 
                 C iCle  e +    +  +C+   ++ H++C+++Wl++   n++C +C
  EPX71865.1 714 CLICLEPFERDVLCRRLKNCK---HFYHKDCVDQWLTT--GNNSCPLC 756
                 777777766666444444555...599**********9..9******* PP

>> zf-RING-like  RING-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   6.7   6.2e-05     0.062       1      43 []     714     756 ..     714     756 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 6.2e-05
  zf-RING-like   1 CeaCkeivtqGvrCsn.esCnvrlHvdCfqhyirthsskkCpkC 43 
                   C +C e   + v+C + ++C+  +H+dC+++ + t  +++Cp C
    EPX71865.1 714 CLICLEPFERDVLCRRlKNCKHFYHKDCVDQWL-TTGNNSCPLC 756
                   888999999999**54389**************.88999****9 PP

>> zf-C3HC4_5  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   3.6    0.0021       2.1      24      48 ..     732     756 ..     713     759 .. 0.91

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0021
  zf-C3HC4_5  24 eCYhkmCesCvdRlFsdGPnqCPva 48 
                 +C h   + Cvd   ++G n+CP  
  EPX71865.1 732 NCKHFYHKDCVDQWLTTGNNSCPLC 756
                 7999999****************85 PP

>> Prok-RING_1  Prokaryotic RING finger family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   6.9      0.01       9.9       3      37 ..     710     744 ..     708     758 .. 0.85

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.01
  Prok-RING_1   3 tgkkCpvCgkelkeedDiVvC...peCgtpyHraCyek 37 
                  +++ C +C ++++ +   V C    +C+  yH++C ++
   EPX71865.1 710 VNNTCLICLEPFERD---VLCrrlKNCKHFYHKDCVDQ 744
                  5889***********...***44458*********875 PP

>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.1       1.2   1.2e+03      23      36 ..      74      87 ..      73      92 .. 0.81
   2 ?    7.4   7.1    0.0041       4.1       2      51 ..     714     758 ..     713     759 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 1.2
                CEEETTTSSSTHSH CS
         PHD 23 rwfHqkClkpples 36
                r++H  C ++p+++
  EPX71865.1 74 RSQHSHCSSVPDTP 87
                789*****999874 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0041
                 BTTTTSTTSTTSCEEEE...TTTSCEEETTTSSSTHSHHSHHSSTBSSTTTHT CS
         PHD   2 CavCkkksdeeeelvqC...dgCkrwfHqkClkppleseekpegewlCekCke 51 
                 C +C +     e+ v+C   ++Ck+ +H++C++  l++ ++      C+ C++
  EPX71865.1 714 CLICLE---PFERDVLCrrlKNCKHFYHKDCVDQWLTTGNN-----SCPLCRS 758
                 999999...5777799944458***********99884444.....5888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (778 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       841  (0.0469072); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.66u 0.26s 00:00:00.92 Elapsed: 00:00:00.46
# Mc/sec: 5054.19
//
Query:       EPX71866.1  [L=314]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.2e-26   92.2   2.0    2.2e-26   92.2   2.0    2.2  3  DUF2418      Protein of unknown function (DUF2418)
  ------ inclusion threshold ------
        0.4   10.4   3.2       0.24   11.1   0.2    2.1  3  DUF3328      Domain of unknown function (DUF3328)


Domain annotation for each model (and alignments):
>> DUF2418  Protein of unknown function (DUF2418)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.34   3.1e+03      43      64 ..      43      64 ..      15      68 .. 0.77
   2 ?   -2.2   0.0      0.68   6.1e+03      41      60 ..      97     117 ..      78     126 .. 0.56
   3 !   92.2   2.0   2.5e-30   2.2e-26       3      95 ..     144     234 ..     142     235 .. 0.97

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.34
     DUF2418 43 llvvllslqlylliskfeqqik 64
                +   l+s +l ++i+++++  k
  EPX71866.1 43 IPLSLVSNILFIFIRAYAENTK 64
                5667888899999999988776 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.68
     DUF2418  41 tlllvvllslqlylli.skfe 60 
                 ++ ++++ ++   +++ +++ 
  EPX71866.1  97 LVAFSIINTVSCFYFQkKAYR 117
                 233444445554555545555 PP

  == domain 3  score: 92.2 bits;  conditional E-value: 2.5e-30
     DUF2418   3 vweLsvWdpskfslrlftlFsPlhvlllvlllsesvlktlllvvllslqlylliskfeqqikDkkiiqkevleEYnekfVkPrlnvlvrdvav 95 
                  +eL vW+p+ fsl++++lFsP+h+l+l++    ++ k+++l++++sl ly++ +kf + ik + +++++v+ EY++kfV+Prl+v +rdva+
  EPX71866.1 144 SFELVVWSPNIFSLYFSCLFSPIHLLILWV--YIQSPKIIFLSIIFSLLLYFVARKFVDMIKGRDCLHQQVFYEYDKKFVEPRLSVAKRDVAT 234
                 689***************************..9**********************************************************98 PP

>> DUF3328  Domain of unknown function (DUF3328)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0      0.79     7e+03       8      25 ..      39      56 ..      36      69 .. 0.69
   2 ?   11.1   0.2   2.7e-05      0.24       2      75 ..      77     155 ..      76     160 .. 0.86
   3 ?   -0.9   0.1      0.13   1.2e+03      16      43 ..     180     207 ..     156     253 .. 0.69

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 0.79
     DUF3328  8 sawrrllllvllllllll 25
                 +w++ l lv ++l++++
  EPX71866.1 39 ERWSIPLSLVSNILFIFI 56
                577777777777777766 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 2.7e-05
     DUF3328   2 rprkrssawrrllllvlllllllllllilssllsssekkaak...kkspsspspaldaieyelkqfk..lgskeapsiy 75 
                 ++ k +s+w+r +l +++l l+ ++++ + s++  ++k +++   +++    +p l  +++e++++k  +   + p+i+
  EPX71866.1  77 KTAKATSSWFRGILSFISLCLVAFSIINTVSCFYFQKKAYRTlpqPDKNIPTTPGLRPVQLEPNEQKsfELVVWSPNIF 155
                 57899*********************************99998877777788999999*****9999765666666665 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.13
     DUF3328  16 lvlllllllllllilssllsssekkaak 43 
                 +++l ++++lll+++++ +    k +++
  EPX71866.1 180 IIFLSIIFSLLLYFVARKFVDMIKGRDC 207
                 4555566666666666665555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       695  (0.038764); expected 358.6 (0.02)
Passed bias filter:                      426  (0.0237604); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:01.44
# Mc/sec: 661.71
//
Query:       EPX71867.1  [L=694]
Description: DNA repair protein Rhp42 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.4e-28   97.8   0.3      1e-27   96.3   0.1    1.9  2  BHD_3           Rad4 beta-hairpin domain 3
    8.3e-28   96.9   1.5    8.3e-28   96.9   1.5    2.2  2  Rad4            Rad4 transglutaminase-like domain
    2.3e-17   63.7   0.9    2.3e-17   63.7   0.9    2.8  2  BHD_2           Rad4 beta-hairpin domain 2
      1e-15   57.3   0.8      1e-15   57.3   0.8    2.8  3  BHD_1           Rad4 beta-hairpin domain 1
    0.00015   22.2   0.0    0.00043   20.7   0.0    1.8  1  Transglut_core  Transglutaminase-like superfamily
  ------ inclusion threshold ------
        2.2    8.7  18.4        1.8    9.0  10.5    2.6  2  PRP1_N          PRP1 splicing factor, N-terminal


Domain annotation for each model (and alignments):
>> BHD_3  Rad4 beta-hairpin domain 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       5.1   1.5e+04       3      23 ..     125     145 ..     125     157 .. 0.78
   2 !   96.3   0.1   3.4e-31     1e-27       1      75 [.     579     651 ..     579     652 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 5.1
                 --TTS-EE-SSGGGS-TTEEE CS
       BHD_3   3 kNeygnieifkpsmlPegavh 23 
                 kNe + + i ++s+ P +  h
  EPX71867.1 125 KNEEKDVHISTSSVTPSDNLH 145
                 688888889999999988777 PP

  == domain 2  score: 96.3 bits;  conditional E-value: 3.4e-31
                 ----TTS-EE-SSGGGS-TTEEEEE-TTHHHHHHHCT---EEEEEEEEE-SS-EE..EEEEEEEEEGGGHHHHHH CS
       BHD_3   1 vPkNeygnieifkpsmlPegavhislkgaakaakklgidyapAvvGFefkgrrgkgiPvidGivVaeedeeavle 75 
                 +PkN ygni++f++sm+P+gavh++ +g++k+akklg+dya+Av+GF+f+  + ++iPv +GivV ee++ +vle
  EPX71867.1 579 IPKNGYGNIDCFVESMVPRGAVHLPFRGISKIAKKLGVDYAEAVTGFDFR--KHRAIPVTTGIVVPEEFAPKVLE 651
                 8************************************************9..44558************999875 PP

>> Rad4  Rad4 transglutaminase-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   2.2       1.7   5.2e+03       8      30 ..      23      50 ..      16      68 .. 0.43
   2 !   96.9   1.5   2.8e-31   8.3e-28       2     146 ..     297     444 ..     296     445 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 1.7
                TT--BSS---...........--TTHHH CS
        Rad4  8 lsslksdksk.....kketkkkkkrlkd 30
                ++++++++       ++++++kk++++ 
  EPX71867.1 23 HENSRKTPRNaiefqQTRSHSKKQNQEP 50
                5555555554333332222222222222 PP

  == domain 2  score: 96.9 bits;  conditional E-value: 2.8e-31
                 EE----TT--BSS---......--TTHHHHHTTS-SEEEEEEETTTTEEEEEESSSS-EE..SS--TTS--...TGGGS----EEEEE-TTS-EEE-HH CS
        Rad4   2 slkkpslsslksdkskkketkkkkkrlkdkdlpypvyWvEvfspekkkwisvdplvgsti..ekkeilepl...aekakqvlsYVvAfdsdgsakDVTr 95 
                 sl++ + s+++ d+++k+  ++++ ++ d dl+ypv+W+Ev+++ + +wisvd++v++ +  ++++++ep+   ae+++  +  VvA+d+d++akDVT+
  EPX71867.1 297 SLQPLTYSTASYDNWSKHALPDETASSIDGDLRYPVFWTEVYDNDQNRWISVDAVVLNGVytNDMSWFEPKgayAESKHLRMGIVVAYDDDYYAKDVTP 395
                 6788899999***********************************************99999***********99999999****************** PP

                 HH-T.TCCCCHGGGSGG.GSHHHHHHHHHHHHHH--S---H..HHHHHHHHH CS
        Rad4  96 RYlsdysnsktkklrve.kskeekkWfesvlrplekrnkertevdalEdael 146
                 RY+  +s+s+ kk r + + +++++ + ++++++ kr++++     lEd+el
  EPX71867.1 396 RYAD-MSSSRCKKIRKSsSPEKKDDVYARIFSQFTKRKNDE--KGLLEDREL 444
                 ***6.7**********95566778899*******9999999..999**9998 PP

>> BHD_2  Rad4 beta-hairpin domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   1.8         3     9e+03      39      40 ..      72      99 ..      22     130 .. 0.57
   2 !   63.7   0.9   7.6e-21   2.3e-17       1      64 []     510     572 ..     510     572 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 3
       BHD_2 39 k..........................e 40
                +                          +
  EPX71867.1 72 NeeafgllstndtpvsgehsdenssgiS 99
                1334444444444444433333334441 PP

  == domain 2  score: 63.7 bits;  conditional E-value: 7.6e-21
       BHD_2   1 rSaerWyrlGReVkpgelPvKrvksraktarkkredekkeeeeeeeegevpLYgewQTelYvpP 64 
                 +S e+++++GR++kpge+P K+vk+ra+t  +kre+e k   e +e+ +++LY+ +QTelY+pP
  EPX71867.1 510 KSPENYHKEGRVIKPGEQPRKMVKARAVTITRKREHESK-VIESKEPVMQGLYSSDQTELYIPP 572
                 799*********************************999.77779******************9 PP

>> BHD_1  Rad4 beta-hairpin domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       1.9   5.8e+03      36      48 ..     405     423 ..     400     423 .. 0.73
   2 !   57.3   0.8   3.4e-19     1e-15       6      51 .]     454     506 ..     451     506 .. 0.90
   3 ?   -0.7   0.1      0.43   1.3e+03      28      41 ..     521     534 ..     517     556 .. 0.62

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 1.9
       BHD_1  36 vgvfkk......kepVYrR 48 
                 +++++k      k +VY R
  EPX71867.1 405 CKKIRKssspekKDDVYAR 423
                 7777556667779999998 PP

  == domain 2  score: 57.3 bits;  conditional E-value: 3.4e-19
       BHD_1   6 enlqdfKnhplYvLerhLkrnEvlhpdakpvgvfkk.......kepVYrRsdV 51 
                 ++++d+Knhp +vL+rhLkr+Ev+  +a+pv ++         +e VYrR+dV
  EPX71867.1 454 KSIADYKNHPDFVLKRHLKREEVIPDNAQPVNKVVFgskknpiQEEVYRREDV 506
                 89********************************3245567889********9 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.43
       BHD_1  28 vlhpdakpvgvfkk 41 
                 v++p+ +p +++k 
  EPX71867.1 521 VIKPGEQPRKMVKA 534
                 899**999999952 PP

>> Transglut_core  Transglutaminase-like superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   1.5e-07   0.00043      58     112 .]     278     350 ..     265     350 .. 0.75

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 1.5e-07
  Transglut_core  58 aslfvallRalGipaRvvtgylsgeeekeq.................svasedaHawvevyl.egygWvplDp 112
                     a+ f+al+R+l + aR+++ +++     +                   ++ ++   w+evy  ++++W+++D+
      EPX71867.1 278 AQGFTALCRSLKLDARLIFSLQPLTYSTASydnwskhalpdetassiDGDLRYPVFWTEVYDnDQNRWISVDA 350
                     6779*****************9954333334445555566665555555555559*******99999****97 PP

>> PRP1_N  PRP1 splicing factor, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0  10.5   0.00059       1.8      11     107 ..      31     135 ..      14     150 .. 0.63
   2 ?    3.8   0.9     0.023        68      61     109 ..     398     446 ..     377     473 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00059
                 HT-----.-..................................-------------------------------..--------HHHHHHHHHHHHHHT CS
      PRP1_N  11 RGAtGft.trsdigp.areaeaseee.....kkkkkeeeeeeeedeedlqdeendefegeseglfakaeydedD..eeAdriyeeiderlderrkkrre 100
                 R A+ f+ trs  ++ ++e+++ + +     ++k+++   +e+e+   l ++++  ++ge+++  +++  d++D  +e  +i+e++d + d+ +kk++e
  EPX71867.1  31 RNAIEFQqTRSHSKKqNQEPTKID-QstfnkETKDEKVGIKENEEAFGLLSTNDTPVSGEHSDENSSGISDREDesDEDSDIWEQVDLKPDRDKKKNEE 128
                 667777768887777233333333.35664322222233334444444445556666777776666555554441156778*********999999988 PP

                 T------ CS
      PRP1_N 101 akekeel 107
                 +  + ++
  EPX71867.1 129 KDVHIST 135
                 8766555 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.023
                 -------------------------HHHHHHHHHHHHHHTT-------. CS
      PRP1_N  61 egeseglfakaeydedDeeAdriyeeiderlderrkkrreakekeelek 109
                  + s++ ++k ++ +  e+ d++y++i ++ ++r+++++   e++ele+
  EPX71867.1 398 ADMSSSRCKKIRKSSSPEKKDDVYARIFSQFTKRKNDEKGLLEDRELEQ 446
                 44555666666778888999***************99998777777763 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (694 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       996  (0.0555525); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.67u 0.31s 00:00:00.98 Elapsed: 00:00:00.49
# Mc/sec: 4272.70
//
Query:       EPX71868.1  [L=641]
Description: GTPase activating protein Gyp3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-31  109.5   2.7      1e-30  107.0   0.0    3.4  3  RabGAP-TBC  Rab-GTPase-TBC domain
  ------ inclusion threshold ------
       0.17   11.4   0.1       0.36   10.3   0.1    1.4  1  PSI_PsaH    Photosystem I reaction centre subunit VI


Domain annotation for each model (and alignments):
>> RabGAP-TBC  Rab-GTPase-TBC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.1      0.44     4e+03      26      56 ..     187     217 ..     167     239 .. 0.57
   2 ?   -0.6   0.1     0.094   8.4e+02     109     163 ..     224     285 ..     218     288 .. 0.68
   3 !  107.0   0.0   1.1e-34     1e-30       2     214 ..     311     543 ..     310     544 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 0.44
  RabGAP-TBC  26 kkqeksekeksklekseeskelsqIkkDvpr 56 
                 k ++++++ +sk ++++   +++ I+ D+++
  EPX71868.1 187 KYNDDEKDFSSKIYSDNLTFKINSINCDIKN 217
                 3333333344444444444446666666554 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.094
  RabGAP-TBC 109 eaFwcfvsLlekyklrdlytsslpg.......lkrklkvleellkkkdpklykhlkeegldl 163
                 ++F cf ++ ++ +  d+y  + +g         + ++v +++l+++ +k  ++l e+g+d+
  EPX71868.1 224 QIFRCFNNFKQSSSEWDMYGFKKKGpftsidqYDSWFEVYNQYLERREQKWKQLLAENGIDY 285
                 56667766665555555555555444433222566677999999999999999999999975 PP

  == domain 3  score: 107.0 bits;  conditional E-value: 1.1e-34
  RabGAP-TBC   2 elRgevWklllgyepevkrlkksekkqeksekeksklekseeske..lsqIkkDvprtfp.........es.......esfknk.qgqnqLeriLkays 81 
                 +lRg++W + +g ++          ++++ + +++ ++ s ++k      I++D+ rtfp         ++        +++++ ++  +L+r+L+ ++
  EPX71868.1 311 DLRGNAWFYYSGGYE---------LCKRNPKLYETLWRCSCIRKPsdSDLIERDLYRTFPdniyfrskpDQpldptgaPEEDSGiIMIAKLRRVLMSFA 400
                 689999999999965.........33333333333333333222223789**********9888877651156677874555555999*********** PP

  RabGAP-TBC  82 iynpevgYcqGmndivaplllvsldeeeaFwcfvsLlekyklrdlytsslpglkrklkvleellkkkdpklykhlke............egldlelfai 168
                  y pe gYcq +n++++++l ++++ee+aFw++v  + +++l+ ++  +l+g + ++ vl   +++ +p++++ ++             +   ++l ++
  EPX71868.1 401 TYLPENGYCQSLNFLAGFFL-LFMSEEKAFWMLVITC-RKYLPRMHDANLEGANIDQSVLMASVRESLPAVWSRINLnfdgmpvndivaKLPPITLVTA 497
                 ********************.8889999*********.9***********************************966699****8888444456789** PP

  RabGAP-TBC 169 kwfltlflrefpletvlrlwD.lllegekfvllrvalailklleeel 214
                  wf+  f+ ++p et+lr+wD +++eg+k+ l+ +al+il+l e+e+
  EPX71868.1 498 AWFMSAFVGVLPTETTLRIWDcFFYEGSKV-LFMTALCILRLGEDEI 543
                 *********************9999**999.*********9998887 PP

>> PSI_PsaH  Photosystem I reaction centre subunit VI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.1   4.1e-05      0.36      57     103 ..     231     279 ..     212     289 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 4.1e-05
    PSI_PsaH  57 dlenttGqWdlyGsdapspyndlq..skffetfaaaftkrglllkflil 103
                 + ++   +Wd+yG  +  p+ ++     +fe++ + + +r+  +k l+ 
  EPX71868.1 231 NFKQSSSEWDMYGFKKKGPFTSIDqyDSWFEVYNQYLERREQKWKQLLA 279
                 66778899***********997641268*************99887764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (641 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1045  (0.0582855); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.31s 00:00:00.93 Elapsed: 00:00:00.46
# Mc/sec: 4222.29
//
Query:       EPX71869.1  [L=421]
Description: AGC/RSK/P70 protein kinase Psk1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.6e-68  229.2   0.0    7.1e-68  228.8   0.0    1.1  1  Pkinase      Protein kinase domain
    5.8e-30  104.4   0.0    7.7e-30  104.0   0.0    1.1  1  Pkinase_Tyr  Protein tyrosine kinase
    1.1e-07   31.5   0.0    1.9e-07   30.7   0.0    1.4  1  Kinase-like  Kinase-like
    3.8e-06   27.5   0.1    1.2e-05   25.9   0.1    1.9  1  Pkinase_C    Protein kinase C terminal domain
  ------ inclusion threshold ------
      0.038   13.6   0.0       0.16   11.6   0.0    1.9  2  FTA2         Kinetochore Sim4 complex subunit FTA2
       0.14   12.1   0.0       0.21   11.5   0.0    1.3  1  APH          Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  228.8   0.0   2.4e-71   7.1e-68       2     258 ..      90     335 ..      89     342 .. 0.94

  Alignments for each domain:
  == domain 1  score: 228.8 bits;  conditional E-value: 2.4e-71
                 EEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH..HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HH CS
     Pkinase   2 ekleklGeGsfGkVykaveketgkivAvKkikkekakkkke..kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslsee 98 
                 + +  lG+Gs+GkV+ + + +tg+ +A K++kk ++  + +  +++ +E +il++++hp+i+rly++f++ d+lyl+l+y++ggel+ +l ++++l+ee
  EPX71869.1  90 HPIAVLGRGSYGKVLLVEQGQTGRLFAQKQLKKASIILRAKgvQQTKNERQILEEVRHPFICRLYYAFQDLDRLYLILQYAPGGELFAHLAEQRMLPEE 188
                 56788*******************************9999999******************************************************** PP

                 HHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-ST CS
     Pkinase  99 eakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelessskltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgkppf 197
                  +  +++++ ++l +lH+ gi++rDlKpeN L+d +g++++tDFGl+k +e + + +sfvgt+eY+APEvl +++y+ +vD+Ws+G+++y ll g+ppf
  EPX71869.1 189 SVAYYTAELTSALIHLHKLGIVYRDLKPENCLLDAEGHVMLTDFGLSKVAEVGANCHSFVGTEEYCAPEVLLGQPYDYSVDWWSMGILIYDLLVGSPPF 287
                 *************************************************************************************************** PP

                 TTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHH CS
     Pkinase 198 sgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeel 258
                  ++++k+ +ek++++             k + +  +s++a+dl++k lkk+pk+Rl+a++ 
  EPX71869.1 288 TANNHKKITEKIVRT-------------KANIPFYVSPDARDLINKYLKKNPKQRLGANNT 335
                 *77777755555555.............67788899*********************9865 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.0   0.0   2.6e-33   7.7e-30       5     250 ..      93     330 ..      89     337 .. 0.89

  Alignments for each domain:
  == domain 1  score: 104.0 bits;  conditional E-value: 2.6e-33
                  EEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBH CS
  Pkinase_Tyr   5 kklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekekltl 102
                    lG+G++GkV   +   ++ +   +  +K+ +   +++  ++  +e +i+++++hp i +l+ +  + ++l+++++y++gG+L  +L ++  + l  
   EPX71869.1  93 AVLGRGSYGKVLLVEQG-QTGRLFAQKQLKKASIILRAKGVQQTKNERQILEEVRHPFICRLYYAFQDLDRLYLILQYAPGGELFAHLAEQ--RMLPE 187
                  689********998877.333344444445555556778899999********************************************98..99*** PP

                  HHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHHHHHHT CS
  Pkinase_Tyr 103 kdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEift 200
                  +++  +++++ +++ +L++  +v rdl   N+Ll+ + +v ++DfGL++     +   + ++     +++apE+l  + +  + D Ws G+l++ ++ 
   EPX71869.1 188 ESVAYYTAELTSALIHLHKLGIVYRDLKPENCLLDAEGHVMLTDFGLSKVA---EVGANCHSFVGTEEYCAPEVLLGQPYDYSVDWWSMGILIYDLLV 282
                  *************************************************99...33344455566779*****************************9 PP

                  TSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS- CS
  Pkinase_Tyr 201 lgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRp 250
                   g+ p++  ++++++ek+ + ++ + p +++++  +l++k ++++p++R 
   EPX71869.1 283 -GSPPFTANNHKKITEKIVR-TKANIPFYVSPDARDLINKYLKKNPKQRL 330
                  .************9999976.5678999********************96 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.7   0.0   6.5e-11   1.9e-07     137     288 .]     181     329 ..     170     329 .. 0.74

  Alignments for each domain:
  == domain 1  score: 30.7 bits;  conditional E-value: 6.5e-11
  Kinase-like 137 thkkletiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggft..aLvragtkvvlseve.kgfaPpEllgsrggytrknktkmthkl 231
                  +++ l + + ++ T++l     +L+++g+v  +++++n lld +g +ml++f+  +   +g++   s v  + +  pE+l             + +++
   EPX71869.1 181 EQRMLPEESVAYYTAELTSALIHLHKLGIVYRDLKPENCLLDAEGHVMLTDFGlsKVAEVGANCH-SFVGtEEYCAPEVLLG---------QPYDYSV 268
                  5666666777889999999999*****************************96114445555555.4444344444444433.........368899* PP

  Kinase-like 232 daWqlGlviyriwclklPltlateeakeewkfklck.kipekv....kaLlkkfLqlsqedR 288
                  d W +G+ iy +     P+t    + + e k  + k +ip  v    + L++k L+ + ++R
   EPX71869.1 269 DWWSMGILIYDLLVGSPPFTANNHKKITE-KIVRTKaNIPFYVspdaRDLINKYLKKNPKQR 329
                  **********************9999999.55554448887663333567777777776665 PP

>> Pkinase_C  Protein kinase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9   0.1     4e-09   1.2e-05       7      46 .]     375     411 ..     369     411 .. 0.90

  Alignments for each domain:
  == domain 1  score: 25.9 bits;  conditional E-value: 4e-09
   Pkinase_C   7 tsNFDpeFTeedprdtppddmpagspltssvqenFrGFtY 46 
                   NF +eFT++++  tp     ++     s+  +FrGFtY
  EPX71869.1 375 AENFSDEFTKMPISVTPIC---SDNLPVGSHSSAFRGFTY 411
                 67*****************...5999999999*******9 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.51   1.5e+03      21      56 ..      85     123 ..      76     165 .. 0.56
   2 ?   11.6   0.0   5.3e-05      0.16     175     204 ..     191     220 ..     177     235 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.51
        FTA2  21 e.kdiefleyLgkglhsiVlkvkirgk..eYALKlFrfl 56 
                 + +d+  + +Lg+g  + Vl v+ ++    +A K  ++ 
  EPX71869.1  85 HpNDFHPIAVLGRGSYGKVLLVEQGQTgrLFAQKQLKKA 123
                 256777788889998998888886544225655533333 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 5.3e-05
        FTA2 175 vsqlpkllrdlkklhklgIvvrDlkeenyi 204
                   ++ +l + l  lhklgIv rDlk+en++
  EPX71869.1 191 AYYTAELTSALIHLHKLGIVYRDLKPENCL 220
                 55788999********************86 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0     7e-05      0.21     162     199 ..     199     238 ..     126     250 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 7e-05
                 S....SS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-EEE CS
         APH 162 g....elptvllHgDlhpgNllvdpddgrvtGviDfedaglg 199
                 +      + +++ +Dl+p N l+d++++ +  + Df++++++
  EPX71869.1 199 SalihLHKLGIVYRDLKPENCLLDAEGHVM--LTDFGLSKVA 238
                 234446789***************776666..9999998775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (421 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       533  (0.0297284); expected 358.6 (0.02)
Passed bias filter:                      485  (0.0270511); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.56u 0.31s 00:00:00.87 Elapsed: 00:00:00.48
# Mc/sec: 2648.02
//
Query:       EPX71870.1  [L=460]
Description: PHD finger containing protein Phf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.1e-11   43.0   7.8    4.9e-11   42.3   7.8    1.3  1  PHD          PHD-finger
     0.0089   15.7   2.5      0.021   14.4   2.5    1.7  1  zf-PHD-like  PHD/FYVE-zinc-finger like domain
  ------ inclusion threshold ------
      0.013   15.5   1.5      0.024   14.7   1.5    1.4  1  zf-RRPl_C4   Putative ribonucleoprotein zinc-finger pf C4 typ
      0.014   15.6   5.5      0.026   14.7   5.5    1.5  1  zf-piccolo   Piccolo Zn-finger
      0.019   14.5   5.5       0.07   12.7   5.5    1.9  1  PHD_2        PHD-finger
      0.066   13.4   0.0       0.16   12.1   0.0    1.6  1  COG5         Golgi transport complex subunit 5
      0.072   13.0   5.7       0.15   12.0   5.7    1.5  1  DUF4452      Domain of unknown function (DUF4452)
      0.089   13.0   1.9       0.16   12.2   1.9    1.3  1  FYVE_2       FYVE-type zinc finger
       0.12   12.3   3.5       0.25   11.3   3.5    1.4  1  Prok-RING_1  Prokaryotic RING finger family 1
        0.2   11.7   3.6       0.47   10.5   3.6    1.6  1  DUF3716      Protein of unknown function (DUF3716)
       0.32   11.0   2.9       0.99    9.5   3.1    1.7  1  DZR          Double zinc ribbon
        3.2    7.7   6.9       0.78    9.7   2.2    2.0  2  C1_1         Phorbol esters/diacylglycerol binding domain (C1


Domain annotation for each model (and alignments):
>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.3   7.8   3.3e-14   4.9e-11       2      50 ..     203     254 ..     202     256 .. 0.90

  Alignments for each domain:
  == domain 1  score: 42.3 bits;  conditional E-value: 3.3e-14
                 BTTTTS.TTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSS..TBSSTTTH CS
         PHD   2 CavCkk.ksdeeeelvqCdgCkrwfHqkClkppleseekpeg..ewlCekCk 50 
                 C vC++ +s  +++lv+CdgC++ fHq C++pp ++  ++ +  ew+C +C+
  EPX71870.1 203 CVVCHRgHSPVSNQLVFCDGCNSPFHQLCHQPPIDDITVQIEdsEWYCMNCQ 254
                 ******88888***********************9887776678*******8 PP

>> zf-PHD-like  PHD/FYVE-zinc-finger like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   2.5   1.4e-05     0.021       1      30 [.     203     232 ..     203     269 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 1.4e-05
  zf-PHD-like   1 CdtCaeskdeekgqlvyCqGCslsyhkaCl 30 
                  C +C+  ++    qlv+C GC + +h+ C 
   EPX71870.1 203 CVVCHRGHSPVSNQLVFCDGCNSPFHQLCH 232
                  999***99999******************5 PP

>> zf-RRPl_C4  Putative ribonucleoprotein zinc-finger pf C4 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   1.5   1.6e-05     0.024       3      64 ..     202     259 ..     200     271 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.6e-05
  zf-RRPl_C4   3 kCkyClskklknlnetvyCeaCeiyfkvknekqkvelvpikele.kislrdkLCtkCkeknek 64 
                  C  C + +  ++n+ v+C+ C++ f+     q  ++ pi++++ +i  ++  C +C+ +  k
  EPX71870.1 202 LCVVCHRGHSPVSNQLVFCDGCNSPFH-----QLCHQPPIDDITvQIEDSEWYCMNCQYSRAK 259
                 5999***********************.....788889999854267778899****987766 PP

>> zf-piccolo  Piccolo Zn-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   5.5   1.8e-05     0.026       2      58 ..     202     258 ..     201     259 .. 0.65

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.8e-05
  zf-piccolo   2 lCplCktelnvgskeppnyntCteCkkqvCnlCGFnptphltekkeWlclnCQtqRa 58 
                 lC +C+   + +s++      C +  +q+C +   +    + e  eW c+nCQ  Ra
  EPX71870.1 202 LCVVCHRGHSPVSNQLVFCDGCNSPFHQLCHQPPIDDITVQIEDSEWYCMNCQYSRA 258
                 799999776666665554444444445555555555555556799*********997 PP

>> PHD_2  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   5.5   4.7e-05      0.07       2      35 ..     215     253 ..     214     254 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 4.7e-05
       PHD_2   2 npllsCdkCsvaVHasCYGvskesdgee.....WlCrrC 35 
                 n+l++Cd+C+  +H+ C   + ++  ++     W+C  C
  EPX71870.1 215 NQLVFCDGCNSPFHQLCHQPPIDDITVQiedseWYCMNC 253
                 99***************9755443333333455***999 PP

>> COG5  Golgi transport complex subunit 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00011      0.16      50     102 ..      32      85 ..      27      90 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00011
                 XXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXX-TTHHHHHHH CS
        COG5  50 rqlitsnhleLlehlskskslss.vlselksslesLsasyerlkskvlepyeea 102
                 +   ++n+++L ++ ++s + ss   ++l s +  Ls s+  l+++v +py e+
  EPX71870.1  32 TISQKENPQNLVSERNSSIHPSSvASTSLISDVPPLSPSFHNLQQHVATPYGEI 85 
                 55568899***************9999************************887 PP

>> DUF4452  Domain of unknown function (DUF4452)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   5.7   9.8e-05      0.15      61     139 ..      39     129 ..      18     141 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 9.8e-05
     DUF4452  61 PnLLteddlvsihssssdRssLssgsPessPlqtqvqpqqvap....slslssass.ayipa.syqsqase..l....klhqPsatRtrna 139
                 P+ L  +   sih ss   +sL s+ P  sP+ +++q +  +p    ++ + s+s  + + + + +++ ++  +     + qP atR r++
  EPX71870.1  39 PQNLVSERNSSIHPSSVASTSLISDVPPLSPSFHNLQQHVATPygeiAMPIPSSSGmSVVAPeASENNVNDvpMtfnrTVTQPNATRLRDT 129
                 6455556678***************************98888888555566666554554441333333321122222578******9975 PP

>> FYVE_2  FYVE-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   1.9   0.00011      0.16      54     105 ..     200     258 ..     183     264 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00011
      FYVE_2  54 ethCilCleefkllvnskrqCldCklnvCkkCsve.......nkkekvwlCkiCseaRe 105
                 ++ C+ C++ +  + n+ + C+ C+    + C +        + +++ w C +C+ +R 
  EPX71870.1 200 VSLCVVCHRGHSPVSNQLVFCDGCNSPFHQLCHQPpidditvQIEDSEWYCMNCQYSRA 258
                 578**********************9888888877777999888999********9996 PP

>> Prok-RING_1  Prokaryotic RING finger family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   3.5   0.00017      0.25       6      36 ..     202     233 ..     199     235 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00017
  Prok-RING_1   6 kCpvCgkelkee.dDiVvCpeCgtpyHraCye 36 
                   C vC++  ++  + +V C+ C +p+H+ C +
   EPX71870.1 202 LCVVCHRGHSPVsNQLVFCDGCNSPFHQLCHQ 233
                  599999877765478***************86 PP

>> DUF3716  Protein of unknown function (DUF3716)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   3.6   0.00031      0.47      14      53 ..     216     259 ..     195     261 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00031
     DUF3716  14 p...CtrCrrgkgpF.eeCvvv...easekakllkgaCanClygkqg 53 
                 +   C+ C   ++pF + C      + + + + +++ C+nC+y++ +
  EPX71870.1 216 QlvfCDGC---NSPFhQLCHQPpidDITVQIEDSEWYCMNCQYSRAK 259
                 24457777...69998889888987667777899*********9865 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   3.1   0.00067      0.99       1      37 [.     206     256 ..     203     261 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00067
         DZR   1 CpqCgeelppdarfCseCgtklkavaa..............edrCpsCgek 37 
                 C + +++++++  fC+ C+++  +  +              e  C++C+++
  EPX71870.1 206 CHRGHSPVSNQLVFCDGCNSPFHQLCHqppidditvqiedsEWYCMNCQYS 256
                 3333455777788********87766688899********999******97 PP

>> C1_1  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   2.2   0.00052      0.78      11      44 ..     200     233 ..     193     235 .. 0.87
   2 ?   -0.4   0.2      0.71   1.1e+03      29      36 ..     248     255 ..     241     258 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00052
                 --B-TTT-SB--SSSS-EEEETTT--EE-CCCCT CS
        C1_1  11 ptfCkhCgeflwgkekqglkCswCkllvHkkChe 44 
                  + C  C    +  + q + C+ C+  +H+ Ch+
  EPX71870.1 200 VSLCVVCHRGHSPVSNQLVFCDGCNSPFHQLCHQ 233
                 678999*9999889******************96 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.71
                 EEETTT-- CS
        C1_1  29 lkCswCkl 36 
                 + C +C++
  EPX71870.1 248 WYCMNCQY 255
                 88999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (460 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       569  (0.0317363); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.50
# Mc/sec: 2750.24
//
Query:       EPX71871.1  [L=153]
Description: ribosomal protein subunit L4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-33  115.0   0.7    1.9e-33  114.4   0.7    1.3  1  MRP-L47   Mitochondrial 39-S ribosomal protein L47 (MRP-L47)


Domain annotation for each model (and alignments):
>> MRP-L47  Mitochondrial 39-S ribosomal protein L47 (MRP-L47)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.4   0.7     1e-37   1.9e-33       1      87 []      38     127 ..      38     127 .. 0.98

  Alignments for each domain:
  == domain 1  score: 114.4 bits;  conditional E-value: 1e-37
     MRP-L47   1 Leeffddkkdl.kseeevkvgraWaaeeLrkksfedLhklwyvllkekNmLlteeeellrkqek..mpsperlkkvkesMeniktVlkeR 87 
                 L++ff++k++l +++ee+k+gr+W+aeeLr+ksf+dLh lwy++l+e+N+Llt+  e++r +++  + s++r+k v+++M+ ik+Vl+eR
  EPX71871.1  38 LWQFFRNKNALsPPDEEAKFGRSWTAEELRWKSFDDLHGLWYNCLRERNLLLTQTTEMKRLRLTipDHSKDRVKTVNKTMATIKFVLWER 127
                 8**********9**************************************************997788999******************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       609  (0.0339673); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.28s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 1062.22
//
Query:       EPX71872.1  [L=618]
Description: Holliday junction resolvase subunit Mus81 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-21   77.0   0.9    4.5e-21   75.7   0.9    1.8  1  ERCC4     ERCC4 domain
     0.0084   16.4   0.0      0.074   13.4   0.0    2.4  2  HHH_8     Helix-hairpin-helix domain
  ------ inclusion threshold ------
      0.064   13.2   0.0       0.17   11.9   0.0    1.7  1  HTH_45    Winged helix-turn-helix


Domain annotation for each model (and alignments):
>> ERCC4  ERCC4 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.7   0.9   7.5e-25   4.5e-21       1     156 []     343     478 ..     343     478 .. 0.91

  Alignments for each domain:
  == domain 1  score: 75.7 bits;  conditional E-value: 7.5e-25
                 EEGGGCT.SHHHH......HHTTTSEEEEE--SSSSE.EE...CTT...............EEEEEEEHHHHHHHHCCSHHHHHHHHHHH.H-SEEEEE CS
       ERCC4   1 iDsrelk.sgieeyl....leelgvevvietlpigdyilwrrkvkaeynleldieepceekvlverksaddlvasikdgrleeqvsrlkrngykkpill 94 
                 iD+re++ +g ++ +    + +++v +++++l++gd  +w   +++++  +++i  +    ++verk+ ddlvasikdgr++eq++rl ++g++ ++++
  EPX71872.1 343 IDTREIRiRGDRNTVadklNNDHNVLCEVRALELGDA-IW---IARDKVTGQEIVLD----FVVERKRYDDLVASIKDGRFHEQKRRLTKSGLSTVFYI 433
                 8****9999966664455477888*************.**...9**9****999999....***************************99********* PP

                 EES-GGGTT................THHH.HHHHHHHHHHHHS-EEEEESSHHHHHHHHHHH CS
       ERCC4  95 vegldqykrknknsrnkqykakvrqinrktiesaLvqlqldfgvsilttesanetaewlanl 156
                 +e  + + ++                +++ i ++ +++q+d+ ++++ t+s  +t+  lan+
  EPX71872.1 434 LEE-SNFDES---------------FSDS-IHTVVSNIQIDHLFHVRCTKSLDHTISTLANM 478
                 *99.455554...............8888.***************************99986 PP

>> HHH_8  Helix-hairpin-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.0   1.2e-05     0.074      24      64 ..      26      65 ..       9      67 .. 0.85
   2 ?   -0.8   0.0      0.35   2.1e+03      32      52 ..     472     495 ..     470     498 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1.2e-05
                CHHHHHHHHCCCCC-SS-HHHHTTHCTTSTT--HHHHHHHH CS
       HHH_8 24 rvraYrrAaraiealpeeitsleeeltklpgiGkkiaakie 64
                  +  r+A ++ ++ p  ++   + +++l+giG+ i ak+e
  EPX71872.1 26 SYQTWRKAYDSMKNCPVTLQHPSQ-ASALKGIGPTICAKLE 65
                56789****************998.************9986 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.35
                 HCCCCC-SS-HHHH.TT..HCTTS CS
       HHH_8  32 araiealpeeitsl.ee..eltkl 52 
                 +++++++++ i+sl ++  +l+ +
  EPX71872.1 472 ISTLANMTKHIESLyQDrkTLKLI 495
                 799**********97545344445 PP

>> HTH_45  Winged helix-turn-helix
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   2.9e-05      0.17      40      74 ..     174     210 ..     168     213 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 2.9e-05
      HTH_45  40 LdmLvekglikk..skekYvlTekGlelleklkelee 74 
                 +++L+ kgl+ +  + +kY+lT+ G+e+  +l ++++
  EPX71872.1 174 MKTLITKGLVYQtgHPSKYCLTDDGEEVCTRLARVDD 210
                 689*******5524779*************9999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (618 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       880  (0.0490825); expected 358.6 (0.02)
Passed bias filter:                      521  (0.0290591); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.29s 00:00:00.87 Elapsed: 00:00:00.45
# Mc/sec: 4141.80
//
Query:       EPX71873.1  [L=302]
Description: C-methytransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.3e-85  283.7   0.0    1.2e-84  283.3   0.0    1.1  1  Ubie_methyltran  ubiE/COQ5 methyltransferase family
    7.6e-17   61.8   0.0    2.1e-16   60.4   0.0    1.8  2  Methyltransf_25  Methyltransferase domain
    4.7e-15   56.0   0.0    1.3e-14   54.6   0.0    1.7  2  Methyltransf_11  Methyltransferase domain
    7.8e-14   51.7   0.0    1.4e-13   50.9   0.0    1.5  2  Methyltransf_31  Methyltransferase domain
    3.6e-12   46.9   0.0    6.5e-12   46.1   0.0    1.4  1  Methyltransf_12  Methyltransferase domain
    2.6e-09   37.1   0.0    4.1e-09   36.5   0.0    1.2  1  Methyltransf_23  Methyltransferase domain
    4.3e-05   23.5   0.1      0.025   14.4   0.0    3.1  3  Methyltransf_8   Hypothetical methyltransferase
    0.00079   19.4   0.0     0.0011   18.9   0.0    1.3  1  Methyltransf_32  Methyltransferase domain
  ------ inclusion threshold ------
       0.16   12.0   0.0       0.39   10.7   0.0    1.7  2  ADH_zinc_N       Zinc-binding dehydrogenase


Domain annotation for each model (and alignments):
>> Ubie_methyltran  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  283.3   0.0     6e-88   1.2e-84       4     233 .]      57     301 ..      52     301 .. 0.93

  Alignments for each domain:
  == domain 1  score: 283.3 bits;  conditional E-value: 6e-88
                      XXXXXXXXXXX-HHHHHHHHHHHHHTTTHHHHHH.HHHHH-..-S--TTEEEEES-TT-HHHHHHHHHHHHHH.....EEEEEES-HHHHHHHH CS
  Ubie_methyltran   4 lkeekvkevfesvaskyDlmndvlslgihrlWkk.fveklv..avkrgakvlDvagGtgDlafklsdsvgekg.....kvvvlDinenmLkvge 89 
                       ke  vk+vf+sva+kyD+mnd +slgihr+Wk+ fv+ l+  ++ ++ ++lDvagGtgD+af+l+d++ +k      kvvv+Din++mL vg+
       EPX71873.1  57 EKEYMVKNVFSSVAKKYDQMNDAMSLGIHRVWKNqFVTALNpgNSTTPMRILDVAGGTGDIAFRLLDHATQKNqdynsKVVVADINPDMLAVGK 150
                      45666*****************************898887632556778*********************99999999**************** PP

                      HHHHHHTSS...TEEEEE--TTT-TT.S-T-EEEEEEES-GGG-S-HHHHHHHHHHHEEEEEEEEEEEE----SHHHHHHHHHHHH.HHHHHHH CS
  Ubie_methyltran  90 kklkeegki...nieflqanaeeLpf.eddsfDvvtvsfGlrnvtDklkaLkeayrvlkpGGrlvvlefskvelpllsqayelyskevlPvlGk 179
                      +++k++ +    +++f+  nae L+   d+s D++t++fG+rn t ++k+L++ayrvlkpGG + +lefskv  pll + y +ys+++lP lG 
       EPX71873.1 151 RRAKKTPYFesrRVDFIEQNAEVLDKiPDNSIDIFTIAFGIRNCTHIDKVLEQAYRVLKPGGVFSCLEFSKVYPPLLAEMYRQYSFKFLPLLGT 244
                      ******9988889***********86268***************************************************************** PP

                      HHHS-HHHHHHHHHHHHHS--HHHHHHHHHHTTEEEE...EEEEEGGGTEEEEEEEE CS
  Ubie_methyltran 180 llakdldsyryLvesirafPdqetlkeliedaGfksv...eyesltgGvvaihigvk 233
                      l+a d +sy+yLvesi++fPd++t++++ie aGf+ +    ye lt+Gv+aih+gvk
       EPX71873.1 245 LIAGDRESYQYLVESIERFPDADTFAKMIERAGFTLAgerGYECLTFGVAAIHTGVK 301
                      **********************************8763337**************98 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       5.7   1.1e+04      48      61 ..      31      44 ..      16      71 .. 0.57
   2 !   60.4   0.0   1.1e-19   2.1e-16       1      97 []     107     212 ..     107     212 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 5.7
                     EEEEESBCCGBSSS CS
  Methyltransf_25 48 vefvqgdaedlpfe 61
                     v+f+  d ++++  
       EPX71873.1 31 VRFHSSDSNKVNDS 44
                     44444444444333 PP

  == domain 2  score: 60.4 bits;  conditional E-value: 1.1e-19
                      EEEET-TTSHHHHHHHCTS...T...SSEEEEEESSHHHHHHHHHHHHHTTT....TEEEEESBCCGBS.SSTTTEEEEEEESTGGGSSHHHHH CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrl...g...kakvtgvDiseemleaareraeeegl....nvefvqgdaedlp.fedgsfDlvvssgalhhlsdedle 83 
                      +Ld++ GtG+++++l+++    +   ++kv+  Di+++ml+  ++ra++  +    +v+f++++ae l+  +d+s+D+ ++++++  ++  +++
       EPX71873.1 107 ILDVAGGTGDIAFRLLDHAtqkNqdyNSKVVVADINPDMLAVGKRRAKKTPYfesrRVDFIEQNAEVLDkIPDNSIDIFTIAFGIRNCT--HID 198
                      8***************99776524679********************985557778************846**********98877766..789 PP

                      HHHHHHHHHEEEEE CS
  Methyltransf_25  84 kalkeiarvLkpgG 97 
                      k+l++++rvLkpgG
       EPX71873.1 199 KVLEQAYRVLKPGG 212
                      *************9 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.6   0.0   6.3e-18   1.3e-14       1      95 [.     108     215 ..     108     216 .. 0.91
   2 ?   -3.0   0.0       6.3   1.2e+04      46      58 ..     254     266 ..     245     276 .. 0.54

  Alignments for each domain:
  == domain 1  score: 54.6 bits;  conditional E-value: 6.3e-18
                      EEET-TTSHHHHHHH.......HTT.SEEEEEES-HHHHHHHHHHCCHHT-....EEEETTEECCCT.SS-TT-EEEEEEES-CCC-CCHHHHH CS
  Methyltransf_11   1 LdvGcGtGrlaeala.......krg.arvvgvDlskemlklakekaseegl....kvefvvadaekl.pfednsfDlvvssevlhhvedpekal 81 
                      Ldv+ GtG +a  l        + + ++vv  D+++ ml++ k++a++ +     +v+f++++ae l +++dns+D+ ++ + + ++   +k+l
       EPX71873.1 108 LDVAGGTGDIAFRLLdhatqknQDYnSKVVVADINPDMLAVGKRRAKKTPYfesrRVDFIEQNAEVLdKIPDNSIDIFTIAFGIRNCTHIDKVL 201
                      89999999999999966666553338****************9999999999***************88************************* PP

                      HHHHHHEEEEEEEE CS
  Methyltransf_11  82 keiaRvLkpgGllv 95 
                      ++++RvLkpgG++ 
       EPX71873.1 202 EQAYRVLKPGGVFS 215
                      ***********986 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 6.3
                      EETTEECCCTSS- CS
  Methyltransf_11  46 efvvadaeklpfe 58 
                      +++v+++e++p +
       EPX71873.1 254 QYLVESIERFPDA 266
                      4555555553322 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       4.2   8.4e+03      51      67 ..      26      42 ..      20      53 .. 0.75
   2 !   50.9   0.0     7e-17   1.4e-13       3     119 ..     103     224 ..     101     290 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 4.2
  Methyltransf_31 51 lgldnveFeqgdieele 67
                     + ++ v+F+ +d ++ +
       EPX71873.1 26 NRVSSVRFHSSDSNKVN 42
                     56778999999988755 PP

  == domain 2  score: 50.9 bits;  conditional E-value: 7e-17
  Methyltransf_31   3 kglrvlDlGCGtGeltfelae...elgp..kaevvGiDiseeaielArenaqklgld...nveFeqgdieeleklledekfDlilsnevlnala 88 
                        +r+lD++ GtG+++f+l +   + ++  +++vv  Di+++++ + + +a+k  +    +v F ++++e l+k + d+++D+ +    +   +
       EPX71873.1 103 TPMRILDVAGGTGDIAFRLLDhatQKNQdyNSKVVVADINPDMLAVGKRRAKKTPYFesrRVDFIEQNAEVLDK-IPDNSIDIFTIAFGIRNCT 195
                      5699*****************887555556888********************9876678*************9.8*******88877779999 PP

  Methyltransf_31  89 dpdkileeiervlkpggilliedprllaelp 119
                      + dk+le++ rvlkpgg++ + +++  + +p
       EPX71873.1 196 HIDKVLEQAYRVLKPGGVFSCLEFS--KVYP 224
                      *********************9999..3333 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.1   0.0   3.3e-15   6.5e-12       1      99 []     108     214 ..     108     214 .. 0.97

  Alignments for each domain:
  == domain 1  score: 46.1 bits;  conditional E-value: 3.3e-15
  Methyltransf_12   1 LeiGcGtGsllrallekl......pdieytgvDispsaiedakeklakrennnnnnvelealdlldldgg..ssfDlvvasnvlhhlkdirevl 86 
                      L++ +GtG+++++ll++        ++++++ Di+p++++  k++ +k       +v++ +++++ ld+   +s D+ ++++ + ++ +i++vl
       EPX71873.1 108 LDVAGGTGDIAFRLLDHAtqknqdYNSKVVVADINPDMLAVGKRRAKKTPYFESRRVDFIEQNAEVLDKIpdNSIDIFTIAFGIRNCTHIDKVL 201
                      89*************************************************************999998899********************** PP

  Methyltransf_12  87 dnirklLkpgGrl 99 
                      ++++++LkpgG++
       EPX71873.1 202 EQAYRVLKPGGVF 214
                      ***********86 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.5   0.0   2.1e-12   4.1e-09      18     162 ..      99     280 ..      75     281 .. 0.71

  Alignments for each domain:
  == domain 1  score: 36.5 bits;  conditional E-value: 2.1e-12
  Methyltransf_23  18 pklraggrvLdiGcGtG.illevl....reng.f..svtgvDlspeaveiaekakkaqkdqfdeqeaaepqgkfdlIvlr.evlehvpdpp... 99 
                      ++  +++r+Ld++ GtG i  ++l    ++n+ +  +v++ D++p + +   +++ a+k+++      +++++ d+I ++ evl  +pd     
       EPX71873.1  99 GNSTTPMRILDVAGGTGdIAFRLLdhatQKNQdYnsKVVVADINPDMLAV--GKRRAKKTPY------FESRRVDFIEQNaEVLDKIPDNSidi 184
                      4578999**********8877777654522221355*********98886..6777777777......66677777766545677777644466 PP

  Methyltransf_23 100 ..............ellrqiatllkpgGylllseplasl.......kedrllld...................wlylvpagrhisffsarslke 153
                                    ++l q+++ lkpgG++ ++e+ +         +     ++                   ++ylv+     +f +a+++++
       EPX71873.1 185 ftiafgirncthidKVLEQAYRVLKPGGVFSCLEFSKVYppllaemY-----RQysfkflpllgtliagdresYQYLVES--IERFPDADTFAK 271
                      66777777777777********************9654466444441.....4445555556666655555557777765..669********* PP

  Methyltransf_23 154 lleeaGlev 162
                      + e+aG+++
       EPX71873.1 272 MIERAGFTL 280
                      *******85 PP

>> Methyltransf_8  Hypothetical methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.1     0.034        68     167     206 ..      22      61 ..      14      73 .. 0.82
   2 !   14.4   0.0   1.3e-05     0.025      66     159 ..     128     219 ..     118     233 .. 0.73
   3 ?    2.0   0.0     0.081   1.6e+02     156     180 ..     256     280 ..     251     288 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.034
                     HHHHHHHHCTTEEEEEEE--STTEEEEEEEE-SSS-TT-- CS
  Methyltransf_8 167 klfaraltklGfevkskdlsnkqfvlfefkkvekkgkkre 206
                      l++++++++ f+ +  +  n+ ++ f fk v+ ++k   
      EPX71873.1  22 GLYQNRVSSVRFHSSDSNKVNDSYTHFGFKDVPEEEKEYM 61 
                     5678899999**********************98877544 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 1.3e-05
                     HHCTS-TTS-EEEES-TT-HHHHH--S-..EEEEESS-SSTTEEES-T.TS-S--TT-EEEEEEES---.SS-HHHHHHHHHHHEEEEEEEEEEE CS
  Methyltransf_8  66 klkkkkdnlvvadlGcGeakiaeavrekekvrsfdlvavnervvacdl.akvPledesvdvavfclslm.gtnladflkeanrvlkvGGllkvae 158
                     k +  ++++vvad+      +a  +r+ +k   f+   v+   +  ++  k+P  d+s+d+  + + +   t + + l++a+rvlk+GG++   e
      EPX71873.1 128 KNQDYNSKVVVADINPD--MLAVGKRRAKKTPYFESRRVDFIEQNAEVlDKIP--DNSIDIFTIAFGIRnCTHIDKVLEQAYRVLKPGGVFSCLE 218
                     55555666777777654..3555566666666666666665555555446787..99****999999863699*****************98877 PP

                     E CS
  Methyltransf_8 159 v 159
                      
      EPX71873.1 219 F 219
                     5 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.081
                     EEEEGGG-S-HHHHHHHHHCTTEEE CS
  Methyltransf_8 156 vaevksrfesvklfaraltklGfev 180
                     + e   rf++ ++fa+ +++ Gf  
      EPX71873.1 256 LVESIERFPDADTFAKMIERAGFTL 280
                     567778*****************86 PP

>> Methyltransf_32  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   5.7e-07    0.0011      15      87 ..      86     169 ..      71     200 .. 0.77

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 5.7e-07
  Methyltransf_32  15 kllkel.......akesgaltvvDvGaGkgYLsfvlal....kekeyklkvvgidakeelvekaekraeklgkkfnkrlsfael 87 
                      ++ k+         +++++++++Dv+ G g  +f+l +    k+++y+ kvv  d++ ++ +  ++ra+k     ++r+ f+e+
       EPX71873.1  86 RVWKNQfvtalnpGNSTTPMRILDVAGGTGDIAFRLLDhatqKNQDYNSKVVVADINPDMLAVGKRRAKKTPYFESRRVDFIEQ 169
                      5555545555566788999******************998744445************************98333344555554 PP

>> ADH_zinc_N  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       4.2   8.4e+03      26      41 ..      75      90 ..      66     112 .. 0.73
   2 ?   10.7   0.0    0.0002      0.39      16     126 ..     135     258 ..     124     262 .. 0.70

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 4.2
                HHHHHHHTTESEEEET CS
  ADH_zinc_N 26 klelakklGadeviny 41
                +   a++lG ++v  +
  EPX71873.1 75 QMNDAMSLGIHRVWKN 90
                5566778887777655 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.0002
                 EEEEEESSHHHHHHHHH.TTESEEEETTTCHHHHHHHHHT...TTSSEEE......EEESSCSHHHHHHHHHCEEEEEEEEECSCTSSEEE..EEHHHH CS
  ADH_zinc_N  16 eviavdsseeklelakk.lGadevinykeadlverikelt...ggegvdv......vfecvGsgatleaalkllkpgGrlvvvGggkgeee..fdlrnl 102
                 +v+++d++++ l+  k+    + ++ +++ d+ e+ +e      ++ +d+      + +c+ + ++le+a+++lkpgG + +  ++k   +    ++++
  EPX71873.1 135 KVVVADINPDMLAVGKRrAKKTPYFESRRVDFIEQNAEVLdkiPDNSIDIftiafgIRNCTHIDKVLEQAYRVLKPGGVFSCLEFSKVYPPllAEMYRQ 233
                 78888888888888888455888888844466555555543222667777777777789999******************9988855555554667766 PP

                 H.HTT-EEEEE-SSCHHHHHHHHHH CS
  ADH_zinc_N 103 l.lkeksilGsllgslreefkeald 126
                   +k + +lG+l ++ re+++ +++
  EPX71873.1 234 YsFKFLPLLGTLIAGDRESYQYLVE 258
                 6677777788887776666665665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       578  (0.0322383); expected 358.6 (0.02)
Passed bias filter:                      509  (0.0283898); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2096.95
//
Query:       EPX71874.1  [L=347]
Description: WD40/YVTN repeat-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      4e-12   45.9   0.0    1.8e-11   43.7   0.0    2.2  3  DUF2415   Uncharacterised protein domain (DUF2415)
  ------ inclusion threshold ------
        0.1   13.5   2.7         14    6.8   0.0    4.0  4  WD40      WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> DUF2415  Uncharacterised protein domain (DUF2415)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       0.6   5.4e+03      26      38 ..     140     152 ..     133     154 .. 0.72
   2 ?   -3.1   0.0      0.87   7.8e+03      18      33 ..     219     234 ..     211     237 .. 0.62
   3 !   43.7   0.0     2e-15   1.8e-11       1      43 []     252     295 ..     252     295 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.6
     DUF2415  26 rvHlvDlRtglde 38 
                  v +vDl +g  +
  EPX71874.1 140 SVKVVDLTSGILT 152
                 4889999877665 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 0.87
     DUF2415  18 LvisEhvgrvHlvDlR 33 
                    +   +   ++D+R
  EPX71874.1 219 FACASQDSSLSVFDVR 234
                 5555555666788888 PP

  == domain 3  score: 43.7 bits;  conditional E-value: 2e-15
     DUF2415   1 GAfRvckFSpesgln.DLLvisEhvgrvHlvDlRtgldehqViv 43 
                 G++R+c+F+p+++ + DLL+++E+   +Hl+DlRt+ d+++V++
  EPX71874.1 252 GSVRSCHFTPPNSGPlDLLLYTEGTRVSHLLDLRTNRDVELVLP 295
                 99***********99**************************986 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.39   3.5e+03      25      36 ..     133     143 ..     117     145 .. 0.71
   2 ?    3.7   0.0     0.014   1.3e+02       4      30 ..     152     178 ..     149     186 .. 0.76
   3 ?    6.8   0.0    0.0016        14      11      38 .]     206     232 ..     194     232 .. 0.76
   4 ?   -1.7   0.1      0.71   6.4e+03      13      26 ..     308     321 ..     299     332 .. 0.57

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.39
                 EEEEETTSEEEE CS
        WD40  25 lasGsdDgtvri 36 
                 l+ ++ D++v++
  EPX71874.1 133 LI-STNDRSVKV 143
                 34.455****98 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.014
                 EEEEESSSSE..EEEEEETTSSEEEEEET CS
        WD40   4 lrtltGHssv..tslafspdgawlasGsd 30 
                 +r l+ H  v  ++ ++s dg+++++ +d
  EPX71874.1 152 TRNLRHH--VnmNHASVSNDGRYMVCVGD 178
                 5678878..54489999******997674 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.0016
                 SSE.EEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  11 ssv.tslafspdgawlasGsdDgtvriWd 38 
                 ss+ ts+  s+++ ++a++s D ++ ++d
  EPX71874.1 206 SSIcTSI--SQNNEMFACASQDSSLSVFD 232
                 3374666..********99******9998 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 0.71
                 EEEEEEETTSSEEE CS
        WD40  13 vtslafspdgawla 26 
                 +++ +f +dg+ + 
  EPX71874.1 308 ICGSCFADDGSSVY 321
                 54444555555443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (347 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       400  (0.0223102); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2464.92
//
Query:       EPX71875.1  [L=167]
Description: bis(5'-nucleosidyl)-tetraphosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.9e-19   68.9   0.4    9.5e-17   61.5   0.4    2.4  1  HIT       HIT domain
    0.00096   19.6   0.2      0.039   14.4   0.2    2.4  1  DcpS_C    Scavenger mRNA decapping enzyme C-term binding


Domain annotation for each model (and alignments):
>> HIT  HIT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.5   0.4   1.1e-20   9.5e-17       5      97 ..      13      93 ..      10      94 .. 0.94

  Alignments for each domain:
  == domain 1  score: 61.5 bits;  conditional E-value: 1.1e-20
                -CCEEEE-SSEEEEE-SS-SSSSEEEEEESSTGCSGGGCCHHHHHHHHHHHHHHHHHHHTCTTCCCEEEEEEESGGGT-SSSS-EEEEEEC-T CS
         HIT  5 pstvvyeddlvlafldidpkapghlLvipkkhlselhdlteeelakllsavkkvakalqkkfknkglrvvinngahagqsvahlHiHviprre 97
                +++v+y+ ++++a+++ +p  pgh+Lvip++            +++l++ v kv+++l+k +++++ ++ i++g++agq+v+hlH+H+ipr++
  EPX71875.1 13 TNQVFYQAKHSFAIVNLKPILPGHVLVIPRR------------IGDLFESVAKVQSVLEKIYTATASNIGIQDGQDAGQTVPHLHVHLIPRKK 93
                679**************************97............78999999999999999999****************************87 PP

>> DcpS_C  Scavenger mRNA decapping enzyme C-term binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.2   4.4e-06     0.039      61     101 ..      49      90 ..       8     100 .. 0.62

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 4.4e-06
                 HHHHHHHHHHHHTT-T.-EEEEE--SCCCT--S-S--EEEEE CS
      DcpS_C  61 emrekakkvieekyne.vdaeelrvgvhyqPsvyhlHlHvis 101
                 e + k+++v+e+ y++      ++ g  + ++v hlH+H+i 
  EPX71875.1  49 ESVAKVQSVLEKIYTAtASNIGIQDGQDAGQTVPHLHVHLIP 90 
                 3345556666666644223334677999999********996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       822  (0.0458475); expected 358.6 (0.02)
Passed bias filter:                      613  (0.0341904); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 1131.83
//
Query:       EPX71876.1  [L=464]
Description: D-3 phosphoglycerate dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.2e-50  169.0   0.0    9.2e-50  168.5   0.0    1.3  1  2-Hacid_dh_C   D-isomer specific 2-hydroxyacid dehydrogenase,
    1.5e-38  131.4   0.0      2e-38  131.1   0.0    1.1  1  2-Hacid_dh     D-isomer specific 2-hydroxyacid dehydrogenase,
    8.1e-05   22.8   0.0     0.0002   21.6   0.0    1.7  1  NAD_binding_2  NAD binding domain of 6-phosphogluconate dehyd
      0.005   16.9   0.0      0.012   15.7   0.0    1.6  1  AdoHcyase_NAD  S-adenosyl-L-homocysteine hydrolase, NAD bindi
  ------ inclusion threshold ------
       0.15   11.6   0.1       0.25   10.9   0.1    1.2  1  Amdase         Arylmalonate decarboxylase


Domain annotation for each model (and alignments):
>> 2-Hacid_dh_C  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  168.5   0.0   2.6e-53   9.2e-50       2     178 .]     160     344 ..     159     344 .. 0.93

  Alignments for each domain:
  == domain 1  score: 168.5 bits;  conditional E-value: 2.6e-53
                   HHHHHHHTTHHHHHHHHHTTCCHTTCCGSBS-GTTSEEEEES-SHHHHHHHHHHHHTT-EEEEESSSHHHHHCHHHHTCEECSHHHHHHH-SEEEE- CS
  2-Hacid_dh_C   2 alllallrrlaeadeevregewksekallgkelsgktvGiiGlGrIGqavakrlkafgmkviaydrskkkeeeeeelgvelvsleellaesDivslh 98 
                   + ++ l+r++ + + e+++gew ++ +    e++gkt+GiiG+G+IG+++  +++a+g++vi+yd+ +      +    +l sl+ell+++D+vs+h
    EPX71876.1 160 GEIICLSRQVGDRSMEIHNGEW-NKVSNGCWEIRGKTLGIIGYGHIGSQLSVLAEAMGLHVIYYDVLPIMPLGSA---KQLSSLHELLRRADFVSCH 252
                   56899*****************.99999999************************************88555333...3789*************** PP

                   S--STTTTTSBSHHHHHCSTTTEEEEESS-GGGB-HHHHHHHHHTTSCCEEEES--SSSSSGTC............HHHHHSTTEEE-SS-T CS
  2-Hacid_dh_C  99 lpltpetrhlinaeelakmkkgailiNtaRGglvdeeaLleaLksgkiagaalDvfeeeplped............spllelpnviltPHia 178
                   +p++pet+++i+ +e+a+mk+g++liN++RG++vd   +++a ksgk+agaa+Dv+  ep+ +             s+l+++ n+i+tPHi+
    EPX71876.1 253 VPASPETKKMISHAEFAAMKNGSYLINASRGTVVDIPSMIAASKSGKLAGAAIDVYPAEPAGNGkgkfadslndwtSELCSCRNIIMTPHIG 344
                   ***********************************************************88877777777787777899***********98 PP

>> 2-Hacid_dh  D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.1   0.0   5.6e-42     2e-38       1     134 []      56     376 ..      56     376 .. 0.99

  Alignments for each domain:
  == domain 1  score: 131.1 bits;  conditional E-value: 5.6e-42
                 EEEEST.CHHHHHHHHHTTEEEEEES.CSSHHHCHHHHTTESEEEE-TTS-BSHHHHHHHTT--EEEESSSSCTTB-HHHHHHTT-EEEE-TTTTHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  2-Hacid_dh   1 vlileplreeelellkeegvevevkd.ellteellekakdadalivrsntkvtaevlealpkLkviaragvGvDnvDldaakerGilVtnvpgystesv 98 
                 +l+le++++++l  lke+g++ve+ + +l+++el+ek+k+++a+ +rs+t++t++vlea+++L vi+++++G+++vDl+ a+erGi V+n p+++++sv
  EPX71876.1  56 ILLLENVNQSALCKLKEQGYQVEFLKsSLSEDELVEKIKGVHAIGIRSKTRLTRRVLEAADNLIVIGCFCIGTNQVDLEFAAERGISVFNSPYANSRSV 154
                 7999*************999******999999******************************************************************* PP

                 HHHH............................................................................................... CS
                 xxxx............................................................................................... RF
  2-Hacid_dh  99 AElt............................................................................................... 102
                 AEl+                                                                                               
  EPX71876.1 155 AELVigeiiclsrqvgdrsmeihngewnkvsngcweirgktlgiigyghigsqlsvlaeamglhviyydvlpimplgsakqlsslhellrradfvschv 253
                 *************************************************************************************************** PP

                 ...........................................................................................T-BHHHHH CS
                 ...........................................................................................xxxxxxxx RF
  2-Hacid_dh 103 ...........................................................................................aaTeeaqe 110
                                                                                                            ++Teeaq 
  EPX71876.1 254 paspetkkmishaefaamkngsylinasrgtvvdipsmiaasksgklagaaidvypaepagngkgkfadslndwtselcscrniimtphigGSTEEAQY 352
                 *************************************************************************************************** PP

                 HHHHHHHHHHHHHHTTCCGTTBCS CS
                 xxxxxxxxxxxxxxxxxxxxxxxx RF
  2-Hacid_dh 111 niaeeaaenlvaflkgespanavn 134
                 ni+ e+ e+l+++++++++  avn
  EPX71876.1 353 NIGLEVSEALTRYINEGNSVGAVN 376
                 *****************9999997 PP

>> NAD_binding_2  NAD binding domain of 6-phosphogluconate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   5.4e-08    0.0002       2      92 ..     196     283 ..     195     302 .. 0.88

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 5.4e-08
                    EEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT.EEE-SSHHHHHHHCSEEEE-SSSHHHHHHHHHS.HCCC--TT-EEEE-S-- CS
  NAD_binding_2   2 igfiGlGvMGsnmalnllkagykvavynrtkekveelvaeg.akaaesieelvasldvvitmvkagkavdevieg.llealkkgdilidgsts 92 
                    +g+iG G +Gs++    ++ g +v+ y++       ++  g ak ++s+ el++++d+v + v+a+++++++i+   ++a+k+g++li+ s  
     EPX71876.1 196 LGIIGYGHIGSQLSVLAEAMGLHVIYYDVL-----PIMPLGsAKQLSSLHELLRRADFVSCHVPASPETKKMISHaEFAAMKNGSYLINASRG 283
                    79**************************76.....4555544899******************************77899********98865 PP

>> AdoHcyase_NAD  S-adenosyl-L-homocysteine hydrolase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   3.4e-06     0.012      21     109 ..     191     280 ..     187     300 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 3.4e-06
                    -TTSEEEEE--SHHHHHHHHHHHHCT-EEEEE-S-HHHHHHHHCTT-EE--HHHCTTT-SEE...EE-.SSSSSSB-HHHHCCS-TTEEEEE- CS
  AdoHcyase_NAD  21 laGkvavvaGyGdvGkGcaaslkglGarvivtevdPicalqaameGfevvtleevvkkadiv...vtt.tGnkdiitlehlkkmkddaivcni 109
                    + Gk+  ++GyG +G   +   +++G +vi  +v Pi  l +a    ++  l+e++++ad+v   v +   +k +i++ ++++mk+ + + n 
     EPX71876.1 191 IRGKTLGIIGYGHIGSQLSVLAEAMGLHVIYYDVLPIMPLGSAK---QLSSLHELLRRADFVschVPAsPETKKMISHAEFAAMKNGSYLINA 280
                    679*************************************9986...577777777777765222433146799************9988775 PP

>> Amdase  Arylmalonate decarboxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   7.1e-05      0.25     109     203 ..      60     157 ..      54     163 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 7.1e-05
      Amdase 109 devnerLvayLeesglevaales.Ld....iedveavakvtaeelvelgkkavaaapeadallisCGGLrtldvvreledelglpvvssalAGlwdavr 202
                 ++vn+     L+e+g++v+ l+s L+    +e+++ v+++  ++ + l++++++aa++   ++i C  + t +v  e  +e g++v  s+ A  + ++ 
  EPX71876.1  60 ENVNQSALCKLKEQGYQVEFLKSsLSedelVEKIKGVHAIGIRSKTRLTRRVLEAADN--LIVIGCFCIGTNQVDLEFAAERGISVFNSPYANSRSVAE 156
                 6899999999*********998635433346677777777777778888888866654..4789***************************99887766 PP

      Amdase 203 l 203
                 l
  EPX71876.1 157 L 157
                 5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (464 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       402  (0.0224218); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 3171.97
//
Query:       EPX71877.1  [L=386]
Description: nucleosome assembly protein Nap1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.5e-87  293.2   6.4    1.5e-87  293.2   6.4    1.4  2  NAP          Nucleosome assembly protein (NAP)


Domain annotation for each model (and alignments):
>> NAP  Nucleosome assembly protein (NAP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  293.2   6.4   8.4e-92   1.5e-87       1     270 []      76     329 ..      76     329 .. 0.95
   2 ?   -5.3   2.5      0.91   1.6e+04      60      72 ..     352     368 ..     341     382 .. 0.32

  Alignments for each domain:
  == domain 1  score: 293.2 bits;  conditional E-value: 8.4e-92
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--S.............................--SSSSTTSTTHHHHHHHTS CS
         NAP   1 rrveaLkklqkelskleaefqeevlelekkyaalykplyekrseIingesepteeeveakedekeeeeeeeekeeekeeekkeeakgipeFWltvlknv 99 
                 +r++ Lk lqk++s le +fq+e++elek +a++y pl+e+r+e++ ge+ep+eee++++     +e ee +k  e +++k++e kgipeFWlt++knv
  EPX71877.1  76 KRISSLKGLQKQYSSLELQFQRELFELEKTFAKKYGPLFERRRELVHGEKEPSEEEIKKG----IPEGEELSKVLEGKNQKDQEMKGIPEFWLTAMKNV 170
                 599******************************************************777....344466778899999999***************** PP

                 HHHHTT--HHHHHHHTTEEEEEEEE-------EEEEEEEE-S-SSB--SEEEEEEEE----........----EEEEEE----B-TT--TTS------- CS
         NAP 100 ellaeliqerDepiLkhLkdirveyllskekegFtleFeFdeNpyFtnevLtktyilksevdkedpfiydgpeiekaegckIdWkegkdvtvktvkkkq 198
                   l+e+i+++De++L+hL d+r+ y ++k  +gF+l+FeF+eNp+F+n+vLtk+y++ +e+  ++ f+y      +a+g++++W+++ d+t +tv kkq
  EPX71877.1 171 LSLSEMITPEDEKALRHLIDVRLVY-MEK--PGFQLQFEFEENPFFSNKVLTKSYYYLEETGASNVFMYG-----SAKGDEVHWHPNADLTIRTVVKKQ 261
                 ************************9.544..9**************************999888878888.....9*********************** PP

                 ---...-------------GGGGS--B---------------HHHHHHHHHHHHHHHHHTHHHHHHHHHHT. CS
         NAP 199 knkktketrtvtkkvpkeSFFnfFsppkvpeeeeeeeeeeeeleelleadyeigealkdkiiPkAveyFtge 270
                 +nk+tk+trtv+  ++++SFFnfFspp++++ee    ee+  l+elle dy+ige++k+k+iP+Av++Ftge
  EPX71877.1 262 RNKNTKQTRTVKVSESRDSFFNFFSPPQMEDEE----EENPGLDELLELDYQIGEDFKEKLIPRAVDWFTGE 329
                 ***************************999885....67999*****************************7 PP

  == domain 2  score: -5.3 bits;  conditional E-value: 0.91
                 .................... CS
         NAP  60 kede......keeee.eeee 72 
                 +++e      +   + +e+e
  EPX71877.1 352 SSNEnfsdsdD---DsSENE 368
                 22222221110...111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (386 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1117  (0.0623013); expected 358.6 (0.02)
Passed bias filter:                      509  (0.0283898); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 2928.12
//
Query:       EPX71878.1  [L=918]
Description: GTPase regulator Vps3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.6e-07   29.0   0.3    1.5e-06   28.1   0.3    1.4  1  CNH        CNH domain
     0.0023   17.3   0.0     0.0072   15.7   0.0    1.8  1  WD40_like  WD40-like domain
     0.0041   17.5   0.1     0.0041   17.5   0.1    2.5  2  Vps39_2    Vacuolar sorting protein 39 domain 2
     0.0043   17.3   0.5     0.0043   17.3   0.5    3.1  3  Vps39_1    Vacuolar sorting protein 39 domain 1


Domain annotation for each model (and alignments):
>> CNH  CNH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.1   0.3   3.3e-10   1.5e-06      11     260 ..      30     270 ..      21     276 .. 0.67

  Alignments for each domain:
  == domain 1  score: 28.1 bits;  conditional E-value: 3.3e-10
         CNH  11 llGteeG.lyllnl........sdeskpvkieklssvtqlaVleelnlllllsdkqLyvydlsaLeekeeesqlakkksenltqklpetkgchffairn 100
                 ++Gt +G ++++++           +k ++++++s v+ + ++  l+ +l+ +d + + ++   Le    +s+        l   ++ ++g h++    
  EPX71878.1  30 YFGTKQGsIFVYEYselkvknpCVFIKSIALSSKSAVKRIFCIPFLDAILVHQDDRAFFCHATTLELVYPSSS--------LDRVVEICHGGHSIE--- 117
                 5666665566666666655333333444555555557777777766666666666666666666666662221........112444444444444... PP

         CNH 101 gyskekfLvvavkskivllewneplkkfkkklrefqvpaevfsisvlkpklcvgvakgFelvnldegaaeslldpednsldfaarkenlkplaviqise 199
                   +k+ +Lvv+  s++ ll  ++  + f  + +e++ p +v++ +vl + +c  + + Felv++   ++es++ +   ++d  +++ + kp+ v q + 
  EPX71878.1 118 --EKSSYLVVTN-SHLRLLSLQKDGTIF--LRNELKYP-NVQTAAVLGNIVCLVTDQSFELVDIL--TSESIPLFPIIKCDSEKNELSYKPIIVSQNN- 207
                 ..6677777654.444444444444556..55666665.89************************..5555555555555555666677887777755. PP

         CNH 200 defLlcy....defavyvdlqGrrsrdseleWegkPesvaclepyllafhknfieirsvetgelv 260
                  efLl      d ++ +vd +G+ ++ s+l++++ P+ v+ +  y++a  + +++i ++++ + v
  EPX71878.1 208 -EFLLITgspkDAIGLFVDINGNVTK-STLTFSFYPKDVVATPHYVFALGPSMLQIIDAKSLQPV 270
                 .****98555579*********8876.9******************************9986655 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   1.6e-06    0.0072      79     118 ..      13      53 ..       5      93 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1.6e-06
   WD40_like  79 ekieedistvkviddklliGtnkGsiyvfs.kdlqleevll 118
                  +++++istv   dd+ + Gt++Gsi+v++  +l++++ ++
  EPX71878.1  13 SELKNQISTVALYDDHAYFGTKQGSIFVYEySELKVKNPCV 53 
                 5789************************9734666666555 PP

>> Vps39_2  Vacuolar sorting protein 39 domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.2      0.86   3.9e+03      78      94 ..     809     825 ..     794     832 .. 0.80
   2 !   17.5   0.1   9.2e-07    0.0041       3      76 ..     837     910 ..     836     913 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.86
     Vps39_2  78 ekvCavCkkrlgesvfv 94 
                 e+vC+ C  +l e+ + 
  EPX71878.1 809 ESVCSACWHTLLEKSVL 825
                 799****9999886555 PP

  == domain 2  score: 17.5 bits;  conditional E-value: 9.2e-07
     Vps39_2   3 lLskhaerldplevLdllPdelplkdlesflekalrnslekkreeqvvkklrkaeklsveeellklrskkvvvt 76 
                 lL+++a+    l v +++P+++ l ++ ++l+   r++ ++ +e++v ++l k  + ++e+  l ++ ++v ++
  EPX71878.1 837 LLHRRASYYSILFVTNTIPNDWNLDSVADYLRVLQRKNAQHLHESHVKASLIKTVSRQTESLFLAVNRRNVTLK 910
                 6777777788888999********************************************99999999999876 PP

>> Vps39_1  Vacuolar sorting protein 39 domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1       1.9   8.7e+03      61      94 ..     464     497 ..     460     501 .. 0.67
   2 !   17.3   0.5   9.6e-07    0.0043       1     107 [.     516     621 ..     516     622 .. 0.73
   3 ?   -2.5   0.0       1.4   6.4e+03      48      67 ..     777     796 ..     772     805 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 1.9
     Vps39_1  61 Llkeladedeedeedsslkgeketiiqylqklse 94 
                 L++e  d ++++  + ++++ + + ++yl++ ++
  EPX71878.1 464 LFRETDDYTQKQMIEITKENAYIMLMRYLKNYKR 497
                 5555555566777777777777778888887765 PP

  == domain 2  score: 17.3 bits;  conditional E-value: 9.6e-07
     Vps39_1   1 iDTaLlkvYlktkp.....klvgpLlrleNaCdlkdveeiLkkekkykeLidlYygkklheeALeLlkeladedeedeedsslkgeketiiqylqklse 94 
                 +D +Ll +Yl++++     k + +L+      d++d+++ L+++++   L +l  g ++++eAL+L+k+l+    e +++ s+++ +++ i   + +  
  EPX71878.1 516 VDHVLLNLYLNMEDttegtKGAEELIEA-GLTDPDDIQRLLSEKNENYLLAILLTGIHKDSEALQLWKNLVLG--EIHDKRSQNELSKMRICLMKAI-- 609
                 6777888888764411111346677766.7899**************************************93..3333334444444445555555.. PP

     Vps39_1  95 edldlileyskwv 107
                  d+ l+++y+ w+
  EPX71878.1 610 -DISLFWKYATWL 621
                 .9999****9997 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 1.4
     Vps39_1  48 lYygkklheeALeLlkelad 67 
                 l ++k++ eeAL +l++ ++
  EPX71878.1 777 LCHKKGKYEEALSVLINNVN 796
                 568999999***99988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (918 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       554  (0.0308997); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.69u 0.28s 00:00:00.97 Elapsed: 00:00:00.47
# Mc/sec: 5867.35
//
Query:       EPX71879.1  [L=634]
Description: CASP family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.2e-36  123.6  18.2    8.2e-36  123.6  18.2    5.3  4  CASP_C         CASP C terminal
     0.0011   19.2   5.3     0.0011   19.2   5.3    6.1  7  KLRAQ          Predicted coiled-coil domain-containing protei


Domain annotation for each model (and alignments):
>> CASP_C  CASP C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.8       0.2   1.8e+03      11     118 ..      32      50 ..      19      91 .. 0.50
   2 ?   -9.2  15.7         2   1.8e+04       5      59 ..     128     189 ..     111     266 .. 0.60
   3 ?  -11.9  21.2         2   1.8e+04      14     131 ..     282     407 ..     269     430 .. 0.43
   4 !  123.6  18.2   9.2e-40   8.2e-36       9     249 ..     392     617 ..     384     619 .. 0.76

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.2
      CASP_C  11 eaeleeqkeLnekLEndllkvqseasnaskasdassagsevsrkaesegrksptssiisgaeesesaesssessiLpivtsQRDRFrkrnaeLEeelrk 109
                  +e+e+++++  +  +dl                                                                                 
  EPX71879.1  32 AEEVEKTRKVSLEERKDL--------------------------------------------------------------------------------- 49 
                 333333333222222222................................................................................. PP

      CASP_C 110 qeetvsslr 118
                          
  EPX71879.1  50 --------S 50 
                 ........2 PP

  == domain 2  score: -9.2 bits;  conditional E-value: 2
      CASP_C   5 eelseleaeleeqkeL...nekLEndllkvqseasnaskasdassagsevsrkaese....g 59 
                 ee ++l++el+++++L   +++L ++l+k++++ +++ ++  ++s++++ ++  e+e     
  EPX71879.1 128 EEKRKLREELKQKESLsteVRNLRQELQKTKDSVDAEVQKRVSKSVQEYEKKFLEKEklhkD 189
                 44444455555555441112334444444444444444444444444444443322222211 PP

  == domain 3  score: -11.9 bits;  conditional E-value: 2
      CASP_C  14 leeqkeLnekLEndllkvqseasnaskasdassagsevsrkaese....grksptssiisgaeesesaesss...........essiLpivtsQRDRFr 97 
                 l   ++ n++L ++l+++ ++++n+s+a +++  +s  +++ e++    +  s+ ++ +s ++ +   e ++            +s L+  ts      
  EPX71879.1 282 LDFMESRNRSLTAELEEIRQSSQNESNAFRNA--QSDLTKQLEEKqaiiQ--SQIETLKSYSDYE---ELKRelsvlkqielnADSPLTESTSLEAQIL 373
                 55556666667777777766666655444433..3333333322111121..1111111111111...1111111223333332222222222222233 PP

      CASP_C  98 krnaeLEeelrkqeetvsslraeiaslqkDNlkL 131
                 +r +eL +el+k +++  sl++++a+ ++ N +L
  EPX71879.1 374 RREKELSNELSKLRTQEASLQQKLANEKARNGSL 407
                 4555555555555555555555555555544443 PP

  == domain 4  score: 123.6 bits;  conditional E-value: 9.2e-40
      CASP_C   9 eleaeleeqkeLnekLEndllkvqseasnaskasdassagsevsrka.ese.....grksptssiisgaeesesaesss.......essiLpivtsQRD 94 
                 +l+++l+++k+ n +LE+   + +++ ++   +s+ +s+++e s++  +s+     gr sptssii+g+ +    +++s       +s+i+++v +QRD
  EPX71879.1 392 SLQQKLANEKARNGSLEKANREQKASLQRL--ESELASLSTEGSTYYpNSSyressGRLSPTSSIIGGSPSIFGGSTTSkmtgpenGSTIMDVVKQQRD 488
                 555555555555555555444443333322..333333444444333222223333555888888777655433333334567777************* PP

      CASP_C  95 RFrkrnaeLEeelrkqeetvsslraeiaslqkDNlkLYEkvRYlqsYnrgskastksssessssasalganpnassveagaeldkYrkaYEeslnPfaa 193
                 RFr+ n +L +++++++e+v +l + + +++k N+ LYE++R+ ++Y+++                     +n+s++ea        +aYE++++Pfa+
  EPX71879.1 489 RFRRANVDLVNQISSSNEKVANLESRLREMEKSNTLLYEQMRFREQYQTEIL-------------------QNPSQIEA-------ATAYENNISPFAS 561
                 ***********************************************99653...................35677777.......89*********** PP

      CASP_C 194 FrgrEseraykrLsllerlvlsltrlvlanrtsRnlflvYalaLHllvfltlyevs 249
                 Fr+rEsera++r+  +erl++ l r+vl n  +R +fl Y +++Hl++f++l++++
  EPX71879.1 562 FRKRESERAFSRMGSFERLLYVLLRTVLLNNGTRAIFLTYLIMVHLFIFVVLFKLG 617
                 ****************************************************9975 PP

>> KLRAQ  Predicted coiled-coil domain-containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.4      0.26   2.3e+03      21      27 ..      42      48 ..      15      86 .. 0.56
   2 ?   -9.5  21.7         2   1.8e+04      25      82 ..     127     185 ..     108     204 .. 0.44
   3 ?   -3.2   6.2       1.1   9.9e+03      30      69 ..     175     211 ..     164     242 .. 0.62
   4 ?   -1.6  10.4      0.37   3.3e+03      22      97 ..     254     328 ..     248     333 .. 0.68
   5 ?   -1.4   0.1      0.32   2.9e+03       6      43 ..     340     374 ..     336     382 .. 0.54
   6 !   19.2   5.3   1.2e-07    0.0011       2      53 ..     378     429 ..     377     433 .. 0.96
   7 ?    0.5   0.8     0.081   7.2e+02      10      50 ..     483     523 ..     480     565 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.26
       KLRAQ 21 vleEqsk 27
                 leE++ 
  EPX71879.1 42 SLEERKD 48
                2222222 PP

  == domain 2  score: -9.5 bits;  conditional E-value: 2
       KLRAQ  25 qskeaslkeelkeke...qslrkseqEvdsL.tFrNkqLekrvellqeeleveekkvksksk 82 
                  +++ +l+eelk+ke   +++r+ +qE++   +     ++krv+   +e e   kk+  k+k
  EPX71879.1 127 EEEKRKLREELKQKEslsTEVRNLRQELQKTkDSVDAEVQKRVSKSVQEYE---KKFLEKEK 185
                 233445666666665222245555555433213334445555554433333...33333333 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 1.1
       KLRAQ  30 slkeelkekeqslrkseqEvdsLtFrNkqLekrvellqee 69 
                 + +++  eke+  + seqE+   t r +qL+k+v+ lq  
  EPX71879.1 175 EYEKKFLEKEKLHKDSEQEN---TERINQLNKKVRDLQAT 211
                 33344444444444445554...44777888888888865 PP

  == domain 4  score: -1.6 bits;  conditional E-value: 0.37
       KLRAQ  22 leEqskeaslkeelkekeqslrkseqE.vdsLtFrNkqLekrvellqeeleveekkvksksknkseaqkkeeeksvl 97 
                 + E ++ ++  +e k +++++ k  +E +d ++ rN+ L+  +e + +  ++e+  +  ++ ++  +++ ee+++++
  EPX71879.1 254 ISENERLKQNSDEPKLENENVDKKMKEhLDFMESRNRSLTAELEEIRQSSQNESNAF--RNAQSDLTKQLEEKQAII 328
                 66666666666777777777766555516999***************9999988664..444333333444445555 PP

  == domain 5  score: -1.4 bits;  conditional E-value: 0.32
       KLRAQ   6 eYsKlraqakvLkkavleEqskeaslkeelkekeqslr 43 
                 +Y+ l+   +vLk+  l+     + l+e+   ++q lr
  EPX71879.1 340 DYEELKRELSVLKQIELNA---DSPLTESTSLEAQILR 374
                 6777888888888754443...3334444433333333 PP

  == domain 6  score: 19.2 bits;  conditional E-value: 1.2e-07
       KLRAQ   2 klaqeYsKlraqakvLkkavleEqskeaslkeelkekeqslrkseqEvdsLt 53 
                  l +e sKlr+q++ L++ + +E++++ sl++  +e+++sl++ e E+ sL+
  EPX71879.1 378 ELSNELSKLRTQEASLQQKLANEKARNGSLEKANREQKASLQRLESELASLS 429
                 5899*********************************************996 PP

  == domain 7  score: 0.5 bits;  conditional E-value: 0.081
       KLRAQ  10 lraqakvLkkavleEqskeaslkeelkekeqslrkseqEvd 50 
                 ++ q    ++a ++  ++ +s +e++ + e+ lr +e+ + 
  EPX71879.1 483 VKQQRDRFRRANVDLVNQISSSNEKVANLESRLREMEKSNT 523
                 67788888888888888888888888888888888877543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (634 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3616  (0.201684); expected 358.6 (0.02)
Passed bias filter:                      742  (0.0413855); expected 358.6 (0.02)
Passed Vit filter:                       188  (0.0104858); expected 17.9 (0.001)
Passed Fwd filter:                        94  (0.0052429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.90u 0.37s 00:00:02.27 Elapsed: 00:00:00.58
# Mc/sec: 3307.50
//
Query:       EPX71880.1  [L=187]
Description: 60S ribosomal protein L17 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.1e-38  128.6   0.1    1.4e-37  128.1   0.1    1.3  1  Ribosomal_L22  Ribosomal protein L22p/L17e
  ------ inclusion threshold ------
      0.053   12.9   0.1      0.055   12.8   0.1    1.1  1  DUF4862        Domain of unknown function (DUF4862)


Domain annotation for each model (and alignments):
>> Ribosomal_L22  Ribosomal protein L22p/L17e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.1   0.1   1.5e-41   1.4e-37       1     103 []      17     151 ..      17     151 .. 0.98

  Alignments for each domain:
  == domain 1  score: 128.1 bits;  conditional E-value: 1.5e-41
                    EEEEEESS-HHHHHHHHHHHTTSBHHHHHHHHHT..-SST..............................THHHHHHHHHHHHHHHH..HT-GGGE CS
  Ribosomal_L22   1 akgsnlrvsfkklrevarlIrgmkveeAlkyLkf..skkk..............................aakfvlklLknaeanaelkgldvdsl 64 
                    a+gs+lr++fk++reva +I+gm++++A +++++  ++k+                              + + vl+lLknaeanae+kgld d+l
     EPX71880.1  17 ARGSYLRTHFKNTREVAFTINGMNLKKAFAFMNNvlDHKQavpfrrfnggvgrtaqgkefgvtqarwpvkSVNVVLDLLKNAEANAESKGLDMDKL 112
                    799********************************888889******************************************************* PP

                    EEEEEEEEEEEEEEEEEEESTTEEEEEEEEEEEEEEEEE CS
  Ribosomal_L22  65 vIeeiqvnkgpklkrrtyrArGrinpirkspchievvlk 103
                    vI++iqvn +pk++rrtyrA Gr++ + ++pchie++l+
     EPX71880.1 113 VIKHIQVNAAPKQHRRTYRAYGRVTAYLSHPCHIEIILT 151
                    *************************************96 PP

>> DUF4862  Domain of unknown function (DUF4862)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   6.1e-06     0.055       5     126 ..       4     129 ..       1     171 [. 0.74

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 6.1e-06
     DUF4862   5 YaslpsereeeeafyaalaelkevkglEiplreklhe.edaeWlasqlpedwel.vvTaipgtmerlakdpafGlaStd..edgRaaAlaflarardai 99 
                 Y ++p+++++  +   +   ++  +  E++++ +  + ++a  +++++ ++ ++  +    g ++r a+ ++fG+  +    ++ +  l+ l++a +++
  EPX71880.1   4 YSAAPASETKCAKARGSYLRTHFKNTREVAFTINGMNlKKAFAFMNNVLDHKQAvPFRRFNGGVGRTAQGKEFGVTQARwpVKSVNVVLDLLKNAEANA 102
                 55555555555555545455555566677877777774455567777777777745888999999**********88762246668899********** PP

     DUF4862 100 aklneaagrqvvsaveihsaPsrkasa 126
                 ++   ++++ v++++++ +aP++++ +
  EPX71880.1 103 ESKGLDMDKLVIKHIQVNAAPKQHRRT 129
                 *********************998665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       446  (0.0248759); expected 358.6 (0.02)
Passed bias filter:                      312  (0.017402); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.25s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 1455.62
//
Query:       EPX71881.1  [L=361]
Description: stress response protein Bis1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.9e-26   92.2  26.5      6e-14   52.6  14.9    4.1  3  Es2       Nuclear protein Es2


Domain annotation for each model (and alignments):
>> Es2  Nuclear protein Es2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.1   3.7e-09   6.6e-05       3      36 ..      28      61 ..      26      84 .. 0.88
   2 !   52.6  14.9   3.3e-18     6e-14     124     300 ..      94     243 ..      63     258 .. 0.67
   3 !   20.9   0.9   1.4e-08   0.00026     366     431 .]     256     317 ..     243     317 .. 0.68

  Alignments for each domain:
  == domain 1  score: 22.8 bits;  conditional E-value: 3.7e-09
         Es2  3 kvLdEdeYtdaLskIIaRDFFPgLlelraqneyL 36
                  ++Ed+Y+++L++II++ ++P+L+ ++a  e L
  EPX71881.1 28 IAIEEDDYIEGLNSIIQKTYYPDLSHMKADVEGL 61
                6789***********************9987765 PP

  == domain 2  score: 52.6 bits;  conditional E-value: 3.3e-18
         Es2 124 kkavdenlsLdaFqskYTSEDNeSFnklldkqnekrre..kyawlwegekiaskrqiaqrereakllekekrlaieadgsktselaaepse..ddrpak 218
                  ++ +++l+L+++qsk+TSEDN+SF++l   ++ +r+e  + ++ ++ ++++        +  +++++                  ++ s   ++rp  
  EPX71881.1  94 LQHNNQDLTLADYQSKFTSEDNASFSELFLIEKDARKEllQKRYGVKLDEKSM----GAASSSQEKIK------------------PRNSIawKERPNV 170
                 68899**********************86665555555003333333332211....11122223333..................122223489**** PP

         Es2 219 pdtwkykarNsLMFkPdsvedaleteaekaeaasrakpkeinyantRleekskeseakeeeasevpaspslsairaaiagrp 300
                 ++tw++k +NsLMF P+  e+       +a ++ r + ++i  + tRl+ +    +++++ ++e  ++p++++ +a+i+g p
  EPX71881.1 171 IQTWNSKQKNSLMFYPQTSEK-------SAVTKARSQHQRIISSSTRLDDNF--LKEANAPSQEPLPEPTINKREASINGYP 243
                 ****************77555.......444444445689********4443..3334445788899999999999999765 PP

  == domain 3  score: 20.9 bits;  conditional E-value: 1.4e-08
         Es2 366 sgnpFkipeaskREelahrlvekvakkkrsekaasskktsgaatPrssplaksrsaasLtPAAqrL 431
                 s+++F ipe+s+RE+l++   ++ ++ ++  ++  s++++++at     ++  ++ ++LtPAA+rL
  EPX71881.1 256 SSTSFYIPETSRREKLHEMQLQNLKAHNNVPSNSISSGEPTSATS----TRLPSRLSTLTPAARRL 317
                 7899************98777777666663233334444433333....23347899*******98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (361 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       774  (0.0431703); expected 358.6 (0.02)
Passed bias filter:                      293  (0.0163422); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2579.15
//
Query:       EPX71882.1  [L=318]
Description: calnexin independence factor Cif1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (318 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2027  (0.113057); expected 358.6 (0.02)
Passed bias filter:                      720  (0.0401584); expected 358.6 (0.02)
Passed Vit filter:                        78  (0.00435049); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.24s 00:00:00.81 Elapsed: 00:00:00.40
# Mc/sec: 2375.88
//
Query:       EPX71883.1  [L=681]
Description: ubiquitin-protein ligase E3 Brl2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.3e-13   50.0  10.2    2.3e-13   50.0  10.2    6.0  7  BRE1           BRE1 E3 ubiquitin ligase
    5.9e-08   32.4   7.6    1.4e-07   31.2   7.6    1.7  1  zf-C3HC4_2     Zinc finger, C3HC4 type (RING finger)
    1.9e-06   27.6   9.4    4.3e-06   26.5   9.4    1.7  1  zf-C3HC4       Zinc finger, C3HC4 type (RING finger)
    4.8e-06   26.3  10.2    9.5e-06   25.4  10.2    1.4  1  zf-C3HC4_3     Zinc finger, C3HC4 type (RING finger)
      1e-05   25.7  12.2    2.8e-05   24.4  12.2    1.8  1  zf-RING_2      Ring finger domain
    2.3e-05   24.2   5.2    5.4e-05   23.0   5.2    1.6  1  Prok-RING_4    Prokaryotic RING finger family 4
    0.00011   22.2   7.2    0.00033   20.6   7.2    1.9  1  zf-RING_UBOX   RING-type zinc-finger
    0.00016   21.9   7.9    0.00049   20.3   7.9    1.9  1  zf-rbx1        RING-H2 zinc finger domain
    0.00059   19.7  12.0     0.0015   18.5  12.0    1.8  1  zf-RING_5      zinc-RING finger domain
  ------ inclusion threshold ------
      0.041   13.8   0.4        0.1   12.5   0.4    1.7  1  zf-C2HC_2      zinc-finger of a C2HC-type
        0.4   10.9  11.0       0.44   10.8   8.1    2.5  2  zf-C3HC4_4     zinc finger of C3HC4-type, RING
       0.77    9.6   0.0       0.77    9.6   0.0    5.2  7  Rad50_zn_hook  Rad50 zinc hook motif
        6.1    6.7  11.9       0.24   11.2   5.5    2.0  2  zf-RING_4      RING/Ubox like zinc-binding domain


Domain annotation for each model (and alignments):
>> BRE1  BRE1 E3 ubiquitin ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.2       3.5   4.8e+03      75      95 .]      37      57 ..      29      67 .. 0.57
   2 ?   -2.8   0.0       5.1     7e+03      52      78 ..     111     139 ..     105     156 .. 0.63
   3 ?   -0.6   0.2         1   1.4e+03      27      46 ..     157     176 ..     134     196 .. 0.64
   4 ?    3.7   3.2     0.045        63       1      49 [.     233     281 ..     233     322 .. 0.89
   5 ?   -3.4   8.5       7.4     1e+04      30      89 ..     357     417 ..     339     428 .. 0.52
   6 !   50.0  10.2   1.7e-16   2.3e-13       1      94 [.     434     525 ..     434     526 .. 0.96
   7 !    8.0   7.5    0.0021         3      23      81 ..     552     615 ..     527     623 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 3.5
        BRE1 75 ieqLkelekefvrklkeleke 95
                 eqL+ + + + ++  +lek+
  EPX71883.1 37 LEQLQTSRRCYEASSNSLEKQ 57
                444444444444444444444 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 5.1
        BRE1  52 rskdalenelkkLnkllsKs..selieqL 78 
                 + k++len+  ++++ l+ s  se+ e+L
  EPX71883.1 111 HIKKSLENDQSAIRAILNESftSEILEKL 139
                 45677777777766666554334555555 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 1
        BRE1  27 tileekklrleaekakadqk 46 
                 + l e+k  l++e+++  + 
  EPX71883.1 157 SQLSERKETLDSEIERVMND 176
                 44555555555555443333 PP

  == domain 4  score: 3.7 bits;  conditional E-value: 0.045
        BRE1   1 lqkELvklekafeelseqlskkvkeltileekklrleaekakadqkyfa 49 
                 +q+ L++l++  ee++  ++   ++++++ +k++ +++ + k +++  +
  EPX71883.1 233 QQSQLQELSRLQEEQQVIMNLYSQQMSSMDSKLNEIDNVILKRKNELGS 281
                 68999********************************999999998765 PP

  == domain 5  score: -3.4 bits;  conditional E-value: 7.4
        BRE1  30 eekklrleaekakad.qkyfaamrskdalenelkkLnkllsKsselieqLkelekefvrkl 89 
                 e ++++++ +  ka  +k+  ++ +  +l+ ++ kL++l  +  e+ ++ + l  + ++kl
  EPX71883.1 357 ERRIAQAKEDLLKASeKKQAGLNEKAGSLTEKVDKLKELDLQVEETKKKTESLKDSVTTKL 417
                 4455555555444431334444444455555555555554444444444444444444444 PP

  == domain 6  score: 50.0 bits;  conditional E-value: 1.7e-16
        BRE1   1 lqkELvklekafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdalenelkkLnkllsKsselieqLkelekefvrklkelek 94 
                 l++EL   e+af+ +++q+ +k  +  +lee ++r++ ek+ka+qkyf +m+s d+l++e+k+L+++++K  e  +++ ++++ ++ ++ +le+
  EPX71883.1 434 LTQELAHTERAFRLANKQVLNK--NDLRLEELINRYKLEKDKAEQKYFVTMKSGDSLHAEVKALREKYKKTDEFTSKMLHSQHLITLEIVKLEQ 525
                 689*******************..5579*******************************************************99999999986 PP

  == domain 7  score: 8.0 bits;  conditional E-value: 0.0021
        BRE1  23 vkeltileekklrleaekakadqkyfaamrskdalenelkkLnkllsKsselieqLke.....l 81 
                  ++++++eek++ le  ++ka+ +  +++ +  +l   +  L k +++     ++L++     +
  EPX71883.1 552 NFSIASQEEKVNNLEGIIEKAKSELTDLNEQSSMLSSNIDSLEKRNERHEWQKQKLNNsavssS 615
                 468999*******************************************999999998655554 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2   7.6     1e-10   1.4e-07       1      40 []     627     667 ..     627     667 .. 0.93

  Alignments for each domain:
  == domain 1  score: 31.2 bits;  conditional E-value: 1e-10
  zf-C3HC4_2   1 kCpiC.ldmlkdpsvvtpCgHvfCqkCilrsLeekn.eCPlC 40 
                 kC +C +++ k+ s +  CgH fC++Ci++ +e  + +CP+C
  EPX71883.1 627 KCSVCnFERWKN-SAISLCGHAFCYECIQKRIETRQrRCPIC 667
                 7****7789998.6****************9999999***** PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   9.4   3.1e-09   4.3e-06       1      41 []     628     667 ..     628     667 .. 0.88

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 3.1e-09
                 -TTT.-S--SS-E.E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiC.leeakepnelleCkHsfCskCirkilksrkkvkCPlC 41 
                 C++C +e +k+   ++ C+H+fC++Ci+k ++  +++ CP+C
  EPX71883.1 628 CSVCnFERWKNSA-ISLCGHAFCYECIQKRIE-TRQRRCPIC 667
                 99**446667766.******************.89999**** PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4  10.2   6.9e-09   9.5e-06       4      45 ..     627     669 ..     625     672 .. 0.90

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 6.9e-09
                 B-TTTS.SSBS-EEETTEEEEEE-HHHHHHHHH.TT-B-TTT-- CS
  zf-C3HC4_3   4 eCviCl.erprnvvllpCgHlvlCeeCaekllk.rkkkCpiCrr 45 
                 +C++C+ er +n ++  CgH  +C+eC +k  + r+++CpiC r
  EPX71883.1 627 KCSVCNfERWKNSAISLCGHA-FCYECIQKRIEtRQRRCPICGR 669
                 7****7256999*********.*******99999********86 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4  12.2     2e-08   2.8e-05       2      43 ..     627     667 ..     626     668 .. 0.87

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 2e-08
   zf-RING_2   2 eCpIC.leelssadsvlllpCgHvfhreClerwlrssst.CPlC 43 
                 +C++C +e+++  +s++ l CgH f++eC+++ ++++++ CP+C
  EPX71883.1 627 KCSVCnFERWK--NSAISL-CGHAFCYECIQKRIETRQRrCPIC 667
                 7****778886..567777.***********999999999**** PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   5.2   3.9e-08   5.4e-05       1      40 [.     628     671 ..     628     676 .. 0.81

  Alignments for each domain:
  == domain 1  score: 23.0 bits;  conditional E-value: 3.9e-08
  Prok-RING_4   1 CvlCgeq.ekkailepCgHlvCkeCfdsk.dls...sCPlCqrri 40 
                  C +C+ +  k+ +++ CgH +C eC ++  + +   +CP+C r +
   EPX71883.1 628 CSVCNFErWKNSAISLCGHAFCYECIQKRiE-TrqrRCPICGRGF 671
                  999996537999***************9853.3357*****9876 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   7.2   2.4e-07   0.00033       1      39 []     628     665 ..     628     668 .. 0.89

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 2.4e-07
  zf-RING_UBOX   1 CpICl.elftdP.lvlpCGHtFCreClwelskslegafkCP 39 
                   C++C+ e +++  + l CGH FC eC+  +++ + ++++CP
    EPX71883.1 628 CSVCNfERWKNSaISL-CGHAFCYECI--QKRIETRQRRCP 665
                   *****9***9885336.**********..699999999999 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   7.9   3.5e-07   0.00049      11      54 ..     625     667 ..     619     668 .. 0.85

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 3.5e-07
     zf-rbx1  11 eeacieckapgdeecpvvlGeCgHaFHlhCiskWlkt.rkvCPlc 54 
                 + +c  c+++  +  + +++ CgHaF  +Ci+k ++t +++CP+c
  EPX71883.1 625 MCKCSVCNFERWK--NSAISLCGHAFCYECIQKRIETrQRRCPIC 667
                 5679999999998..666677****************7778**** PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5  12.0   1.1e-06    0.0015       1      43 [.     627     668 ..     625     669 .. 0.86

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 1.1e-06
   zf-RING_5   1 hCnkCfeklskeekfyltsCgHifCekClkkll.ekeavCpiCr 43 
                 +C++C  +    ++  +  CgH fC +C++k+  +++++CpiC+
  EPX71883.1 627 KCSVCNFER--WKNSAISLCGHAFCYECIQKRIeTRQRRCPICG 668
                 588885555..57788999************************7 PP

>> zf-C2HC_2  zinc-finger of a C2HC-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.4   7.4e-05       0.1       3      14 ..     662     673 ..     660     678 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 7.4e-05
   zf-C2HC_2   3 vpCpkCgRsFnp 14 
                 + Cp+CgR F++
  EPX71883.1 662 RRCPICGRGFGA 673
                 68********54 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0       1.5     2e+03      20      31 ..     197     208 ..     195     214 .. 0.75
   2 ?   10.8   8.1   0.00032      0.44      16      42 .]     644     667 ..     628     667 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 1.5
  zf-C3HC4_4  20 fClsCisslqke 31 
                 + l+Ci+++  +
  EPX71883.1 197 YTLRCINESVSS 208
                 6689***98765 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00032
  zf-C3HC4_4  16 CGhsfClsCisslqkepdgeqllCplC 42 
                 CGh fC +Ci++  +  +    +Cp C
  EPX71883.1 644 CGHAFCYECIQKRIETRQR---RCPIC 667
                 **********999988866...6**99 PP

>> Rad50_zn_hook  Rad50 zinc hook motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       2.6   3.5e+03      34      47 ..     132     145 ..     128     147 .. 0.73
   2 ?   -3.6   0.2       7.4     1e+04      39      49 ..     400     410 ..     399     412 .. 0.54
   3 ?   -2.4   1.1       3.1   4.3e+03      34      50 ..     460     476 ..     454     477 .. 0.80
   4 ?   -3.4   0.2       6.5   8.9e+03       1      15 [.     488     502 ..     488     504 .. 0.66
   5 ?   -1.9   0.1       2.3   3.2e+03       5      19 ..     520     534 ..     519     536 .. 0.82
   6 ?   -1.3   0.1       1.4     2e+03      37      51 ..     568     582 ..     563     583 .. 0.86
   7 ?    9.6   0.0   0.00056      0.77      18      30 ..     659     672 ..     653     676 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 2.6
                    HHHHHHHHHHHHHH CS
  Rad50_zn_hook  34 rseLikelqskler 47 
                     se++++l+s +++
     EPX71883.1 132 TSEILEKLSSSTDS 145
                    57899999887775 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 7.4
                    HHHHHHHHHHH CS
  Rad50_zn_hook  39 kelqsklerlp 49 
                    +e ++k+e+l+
     EPX71883.1 400 EETKKKTESLK 410
                    45556666654 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 3.1
                    HHHHHHHHHHHHHHHH. CS
  Rad50_zn_hook  34 rseLikelqsklerlpe 50 
                     +eLi++++ + ++ ++
     EPX71883.1 460 LEELINRYKLEKDKAEQ 476
                    58999999999888766 PP

  == domain 4  score: -3.4 bits;  conditional E-value: 6.5
                    HHHHHHHHHHHHHHH CS
  Rad50_zn_hook   1 lhqeteelnkkieel 15 
                    lh+e + l++k++++
     EPX71883.1 488 LHAEVKALREKYKKT 502
                    577777777777765 PP

  == domain 5  score: -1.9 bits;  conditional E-value: 2.3
                    HHHHHHHHHHHTT-S CS
  Rad50_zn_hook   5 teelnkkieelkeak 19 
                    ++ l++ i+el+e++
     EPX71883.1 520 IVKLEQSISELSEVR 534
                    778999999999987 PP

  == domain 6  score: -1.3 bits;  conditional E-value: 1.4
                    HHHHHHHHHHHHH.. CS
  Rad50_zn_hook  37 Likelqsklerlpee 51 
                    +i++ +s+l +l+e+
     EPX71883.1 568 IIEKAKSELTDLNEQ 582
                    899999999999986 PP

  == domain 7  score: 9.6 bits;  conditional E-value: 0.00056
                    -SE.E-TTT--EE- CS
  Rad50_zn_hook  18 akg.cCPlCgReld 30 
                    +++ +CP CgR ++
     EPX71883.1 659 TRQrRCPICGRGFG 672
                    44559*******98 PP

>> zf-RING_4  RING/Ubox like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.4       2.6   3.6e+03      17      27 ..     623     633 ..     613     642 .. 0.67
   2 ?   11.2   5.5   0.00017      0.24      20      45 ..     644     669 ..     637     672 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 2.6
   zf-RING_4  17 pCeCgyqiClf 27 
                    C++ +C f
  EPX71883.1 623 RAMCKCSVCNF 633
                 44566666654 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00017
   zf-RING_4  20 CgyqiClfCyhrileeeegrCPaCre 45 
                 Cg+ +C  C ++ +e+ + rCP C +
  EPX71883.1 644 CGHAFCYECIQKRIETRQRRCPICGR 669
                 ************************66 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (681 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3000  (0.167327); expected 358.6 (0.02)
Passed bias filter:                      519  (0.0289475); expected 358.6 (0.02)
Passed Vit filter:                        93  (0.00518713); expected 17.9 (0.001)
Passed Fwd filter:                        41  (0.0022868); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 1.09u 0.29s 00:00:01.38 Elapsed: 00:00:00.54
# Mc/sec: 3765.46
//
Query:       EPX71884.1  [L=1070]
Description: exocyst complex subunit Sec8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      8e-35  119.8   2.7    9.8e-35  119.5   1.0    2.2  2  Sec8_exocyst  Sec8 exocyst complex component specific domain
    1.8e-06   26.8   0.6    4.5e-06   25.5   0.3    1.8  2  Zw10          Centromere/kinetochore Zw10


Domain annotation for each model (and alignments):
>> Sec8_exocyst  Sec8 exocyst complex component specific domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.5   1.0   1.1e-38   9.8e-35       2     138 ..      53     188 ..      52     192 .. 0.95
   2 ?   -4.2   0.0       1.6   1.4e+04     118     129 ..     970     981 ..     959     983 .. 0.65

  Alignments for each domain:
  == domain 1  score: 119.5 bits;  conditional E-value: 1.1e-38
  Sec8_exocyst   2 LkevlnkikeeWpavlsddanpvelalsllDdssvGlahrlkefkqlkkqieeaLqevvnehhqaFnssiasYskilssiqesqekvselKesleea 98 
                   Lk  +++i++eW+++ ++d+ p+++al+llD+ s+G+ h  k+f  ++++++++Lq v+++h+++F++s+++Y++i++ iq +  +++ lK sle++
    EPX71884.1  53 LKFLVQEIEDEWKDLCREDYRPISTALELLDEDSFGRDH--KSFLRVYDRVSSSLQAVADQHKDDFARSVSAYGEIIDGIQRCLVRINTLKSSLENS 147
                   777899******************************655..5******************************************************* PP

  Sec8_exocyst  99 kkkl.stkkkeLkelnarsakykevieiLdaieelkkvpdk 138
                   ++++  ++ k+L+++ +rs++++++ieiL++i+e ++v++ 
    EPX71884.1 148 RQHIgVANVKDLQQVMTRSSQHQKIIEILKEINEANEVFET 188
                   ****77788****************************9985 PP

  == domain 2  score: -4.2 bits;  conditional E-value: 1.6
  Sec8_exocyst 118 kykevieiLdai 129
                   +++ +i++L+++
    EPX71884.1 970 NMSTMIQVLKSL 981
                   455677777665 PP

>> Zw10  Centromere/kinetochore Zw10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.5   0.3   5.1e-10   4.5e-06      12     170 ..      87     242 ..      78     267 .. 0.81
   2 ?   -3.4   0.0      0.29   2.6e+03     209     231 ..     321     343 ..     310     354 .. 0.82

  Alignments for each domain:
  == domain 1  score: 25.5 bits;  conditional E-value: 5.1e-10
        Zw10  12 lekkisklekkveeikeevskmivkkYseflelsssaeellerveslskeidalkkkveneieqdlkaaveelaelkqqlkekevvlellealkkieea 110
                 +    +   +   ++ +++++  +++ ++f  + s   e+++ ++     i+ lk+ +en+ ++   a v+ l +  +   +++ ++e+l+++++ +e 
  EPX71884.1  87 FGRDHKSFLRVYDRVSSSLQAVADQHKDDFARSVSAYGEIIDGIQRCLVRINTLKSSLENSRQHIGVANVKDLQQVMTRSSQHQKIIEILKEINEANEV 185
                 5555556666677888888888888999*********************************999999999***************************** PP

        Zw10 111 leelkealknkaflvaadlleelksll.....dlekvekafqlkilkalrkelsvlsenlqykLg 170
                 +e++++ l+ k++    +l++++++ l     d++ v+  f+        + l  l  +l ++L+
  EPX71884.1 186 FETTPKLLQAKDYYNLCNLVHRVRERLmhpafDGILVVEQFK--------SRLIGLISHLEDVLS 242
                 *************************66555555555544444........444444444444444 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 0.29
        Zw10 209 llsevleAlavlGeleeklklfg 231
                  l  +le l++lG+l++ + +++
  EPX71884.1 321 DLRIILESLNLLGKLPNAISALK 343
                 57889999******999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1070 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       938  (0.0523175); expected 358.6 (0.02)
Passed bias filter:                      569  (0.0317363); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.77u 0.31s 00:00:01.08 Elapsed: 00:00:00.50
# Mc/sec: 6475.15
//
Query:       EPX71885.1  [L=994]
Description: inositol polyphosphate kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-53  180.3   0.2    2.7e-52  177.5   0.0    2.4  3  IPK       Inositol polyphosphate kinase


Domain annotation for each model (and alignments):
>> IPK  Inositol polyphosphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.1       0.5   8.9e+03      48      90 ..      31      74 ..      19      86 .. 0.58
   2 ?   -0.2   0.0     0.044   7.8e+02     120     146 ..     186     248 ..     177     436 .. 0.68
   3 !  177.5   0.0   1.5e-56   2.7e-52       1     196 [.     738     948 ..     738     949 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 0.5
                HHHSEEEEEEEEEETTTTEEEEEEHHHHCT-SHH.HHHHHHHHC CS
         IPK 48 eslGfrilGmkvykeeedeyltvdkkygrslske.evkealkkF 90
                 + Gfr   mk  ++++d  ++++++  +  s+    ++ ++kF
  EPX71885.1 31 LENGFRAKEMKNRERNSDFSVQKSRHPSKVSSSGrRRSDQFSKF 74
                56788888888843344434455555555444333555666666 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.044
                 CSHSEEESSEEEEEEEETT............................................ CS
         IPK 120 sqeslrfyssSLLfvyegdseaseka....................................e 146
                  ++slr+++sS L + +g++++ +                                      +
  EPX71885.1 186 ASKSLRVFASSTLNTNDGNNNTLHPVpegdsvgrsspaipdqstiyshqnyhsnstpgllepN 248
                 677899999999999999976666556666666666655555555555555555555555550 PP

  == domain 3  score: 177.5 bits;  conditional E-value: 1.5e-56
                 EEEEE-TTTT-SSEEEEEEEESSSSS-TTSTCHHHHHHHHHHCCSTHHHHSEEEEEEEEEETTTTEEEEEEHHHHCT-SHH.HHHHHHHHCCCSSS.SC CS
         IPK   1 ylvLedltagfkkPcvlDvKlGtrtydedaseekrekqqkkskettseslGfrilGmkvykeeedeyltvdkkygrslske.evkealkkFlsngk.sl 97 
                 y+v+edlt+g+++PcvlDvK+Gtr+y+  a+e+k+++q kk+++tts+ lG+ri+Gm+v++++ ++y++ dk++gr++++  e++ al +Fl   + ++
  EPX71885.1 738 YIVIEDLTSGMNRPCVLDVKMGTRQYGIMATEKKKASQTKKCAMTTSRVLGVRICGMQVWHSNCQSYTFEDKYVGRDIKAGeEFQLALMRFLGWMEdDE 836
                 89*****************************************************************************988**********9877444 PP

                 CHHHHHHH...CHHHHHHHHHHHHHCSHSEEESSEEEEEEEETT......................SSEEEEEE--TTEEE..............--TS CS
         IPK  98 rkdakaas...kllerLqelkqvlesqeslrfyssSLLfvyegdseasekaeekeaeeeeeeeskekkvevklIDFAhvvp..............tesg 179
                 ++++++++   ++l++L++l+q+++  +  r+y+sSLLf+y+g+++ s+     ++++ ++e  ++++++++++DFA++v+              ++++
  EPX71885.1 837 DNEHVLIHhvpAILRKLRHLEQIVRLLRGSRLYASSLLFIYDGEPSPSN----GSSSSLDHEGASAREIDIRIVDFANCVFaedknmlsdatcppQHPE 931
                 4444444455599*******************************87765....5666777778899********************************* PP

                 S--HHHHHHHHHHHHHH CS
         IPK 180 gpDegyllGlksLikil 196
                 ++D+gy++Gl++L  ++
  EPX71885.1 932 SYDKGYVRGLRTLRLYF 948
                 ************98766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (994 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       781  (0.0435607); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.72u 0.30s 00:00:01.02 Elapsed: 00:00:00.46
# Mc/sec: 6457.47
//
Query:       EPX71886.1  [L=646]
Description: Rik1-associated factor Raf2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.3e-17   62.5   0.3    8.1e-17   61.6   0.3    1.5  1  DNMT1-RFD       Cytosine specific DNA methyltransferase repli
  ------ inclusion threshold ------
        8.1    7.2   7.1       0.76   10.5   0.1    2.9  4  DNA_repr_REX1B  DNA repair REX1-B


Domain annotation for each model (and alignments):
>> DNMT1-RFD  Cytosine specific DNA methyltransferase replication foci domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.6   0.3     9e-21   8.1e-17       4     143 ..      14     151 ..      12     152 .. 0.91

  Alignments for each domain:
  == domain 1  score: 61.6 bits;  conditional E-value: 9e-21
                 S-EEEEEEEEEEETTSBB--STTSTTTTT--EEEEEEE.EETT.----SSTT.SEEEEE....ES-ECEEEEEECS...SSSBEEEEEEESS-EEEE-S CS
   DNMT1-RFD   4 rplrkltdfelydkdgelvslevleieknadifisgvv.kdidsedeekkkekgiedkglqiklgpIkeWtisgvd...egekalivlsTetadYkLlk 98 
                 r ++ l++ ++++++g+l++le  ++ ++  + ++g++ ++ + e +e  ke + +  g++ik++pI  W++s+ d   eg+ + i++ T +++Y +l+
  EPX71886.1  14 RETHGLEQITVTNEHGRLCDLE--DVFEYGPFTLTGILvANTQ-E-NERRKE-NTTPLGHSIKISPI--WMYSLNDdfkEGI-MRIYIPTLNRRYVILS 104
                 77899*****************..9999**********66666.3.444444.5788899*******..*****99998998.**************** PP

                 B-TTTHHHHHHHHHHHHHHHHHHHHHHHHT....T--HHHHHHHHHH CS
   DNMT1-RFD  99 PsaeYapiyekviekarlsvevvkfLkrsp..daelsyeelikkvle 143
                  s+eY+p+++++ ek+rl++    ++k+++      +y+++i++v++
  EPX71886.1 105 SSTEYQPYFDQILEKNRLFYVLKDKFKQDMvrGHLQDYDSYISVVTD 151
                 ******************************99999********9986 PP

>> DNA_repr_REX1B  DNA repair REX1-B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.1         2   1.8e+04      73      86 ..      49      62 ..      48      64 .. 0.76
   2 ?   10.5   0.1   8.5e-05      0.76      16      62 ..     122     170 ..     114     183 .. 0.86
   3 ?   -3.6   0.1         2   1.8e+04      54      81 ..     202     228 ..     197     237 .. 0.46
   4 ?   -1.7   0.0      0.52   4.7e+03      36      70 ..     366     402 ..     355     416 .. 0.55

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 2
  DNA_repr_REX1B 73 lirkvqekEkeKLe 86
                    l+++ qe+E+ K +
      EPX71886.1 49 LVANTQENERRKEN 62
                    57788999999855 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 8.5e-05
  DNA_repr_REX1B  16 iYkefeegfkaylksgaeeeykqlvkevTeefseiSke..vleieaaLr 62 
                     ++  +++ fk+ +  g+ ++y+++++ vT++++  S+   +l i+++Lr
      EPX71886.1 122 LFYVLKDKFKQDMVRGHLQDYDSYISVVTDKMNCASEYhaILLIQKHLR 170
                     6778999****************************98555999999997 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 2
  DNA_repr_REX1B  54 vleieaaLreeasredlaelirkvqekE 81 
                     + +i++++++ +sr    +  ++v ekE
      EPX71886.1 202 IYQIHKNIQSVRSRRRN-TKRSSVAEKE 228
                     44555555544322222.2223444444 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 0.52
  DNA_repr_REX1B  36 ykqlvkevTeefse.iSkevleieaaLreea.sredl 70 
                     y+  +++   +f+e + ++++ + +++r+++ + +d+
      EPX71886.1 366 YQITINQARVQFRErCRQRIQWVDHSFRKSEnEIDDI 402
                     5556666666665324455666666666654333344 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (646 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       710  (0.0396006); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.30s 00:00:00.88 Elapsed: 00:00:00.46
# Mc/sec: 4223.89
//
Query:       EPX71887.1  [L=302]
Description: cargo receptor for soluble protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   2.6e-111  371.5   4.9   2.9e-111  371.3   4.9    1.0  1  SURF4            SURF4 family
  ------ inclusion threshold ------
       0.15   12.1   8.6       0.26   11.2   7.7    1.7  2  NMN_transporter  Nicotinamide mononucleotide transporter
       0.51    9.8  15.5       0.27   10.7   3.1    2.1  2  YibE_F           YibE/F-like protein


Domain annotation for each model (and alignments):
>> SURF4  SURF4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  371.3   4.9  4.9e-115  2.9e-111       2     267 .]      34     302 .]      33     302 .] 0.99

  Alignments for each domain:
  == domain 1  score: 371.3 bits;  conditional E-value: 4.9e-115
       SURF4   2 eliakiedlaetllrktkkylPtlarlllvatfleDglrllfqwsdqveyldkskklgyflatllvlvvllglligsllvvlrkkvayavgvLlfivil 100
                 e++++i ++ae +l+ + +y+P l+r+l+vat++eD++r+++qw+dqv+y+++++++++ +a++l+l++++ +++gs++vv+rk++ ya+g+Llf+++l
  EPX71887.1  34 ERASQIVEQAEIFLAPLGPYMPALGRFLIVATYFEDAIRIVTQWPDQVSYMRDYRRFRFGTAPFLLLLCVVLMFVGSTMVVFRKRQVYAIGSLLFVTLL 132
                 6899*********************************************************************************************** PP

       SURF4 101 qaiaYslltdlklllrnlsvigglllllaesliekks.lfaglPeleeeekaksylllagrvllvlmfisllafe...lsftrvlltiigvaliilvvi 195
                 qa+aY+llt+ ++++rn+sviggl+l++++++i+++  +faglP+++e +++++y++l+grvll++mfi+lla+e   + +tr+ +++++v+++++vvi
  EPX71887.1 133 QAFAYGLLTSGEMFFRNVSVIGGLCLVASDTFIHRRLnRFAGLPAVSE-HNKRTYFQLGGRVLLIFMFIGLLAKEgsgITYTRIFVHLLSVTACTMVVI 230
                 ***********************************9989*********.9*************************99999******************* PP

       SURF4 196 GfktklaalvLvllLfvlnlvlnafWtipkekelrdflkYdffqtlsviGGLLlvvatGpGelsvDekkkky 267
                 Gfk+k +a++Lvl+L+v n+++n+fW+ip++++ rdf++Ydffqtls+iGGLL++v+tGpG++svDekkk+y
  EPX71887.1 231 GFKAKYFAAILVLILSVSNFIINSFWSIPRNSPHRDFYRYDFFQTLSIIGGLLYLVNTGPGKFSVDEKKKIY 302
                 **********************************************************************98 PP

>> NMN_transporter  Nicotinamide mononucleotide transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   1.3     0.059   3.5e+02      84     117 ..      97     129 ..      56     152 .. 0.55
   2 ?   11.2   7.7   4.3e-05      0.26      10     153 ..     106     255 ..      94     259 .. 0.66

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.059
  NMN_transporter  84 illlvivlgtallgfllkaltdaalpvlDafttv 117
                      +lll++v++++ +g ++  + + ++  + ++++v
       EPX71887.1  97 FLLLLCVVLMF-VGSTMVVFRKRQVYAIGSLLFV 129
                      33333333333.3333333333444444444444 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 4.3e-05
  NMN_transporter  10 lgllsvllaarrniwnwpvgiisvllyivvffqaglygdallqlfyiv.msiyGwir......Wsknkkk......avrkltkkewlilllviv 90 
                      + + s++ ++r++++  + +++ v+l+  ++++    g++     ++  +s++G +       + +++ +      av+ ++k+ ++ l + ++
       EPX71887.1 106 MFVGSTMVVFRKRQVYAIGSLLFVTLLQAFAYGLLTSGEM-----FFRnVSVIGGLClvasdtFIHRRLNrfaglpAVSEHNKRTYFQLGGRVL 194
                      3333333333333333333344444444444444444444.....444455554444122223655555589888449*********9999999 PP

  NMN_transporter  91 lgtallgfllkaltdaalpvlDafttvlsivaqllmarryvenWllWivvdvvsvvlyllkgl 153
                      l+++++g+l k   ++ + ++  f+  ls++a+++++ ++   +++ i+v ++sv  ++++ +
       EPX71887.1 195 LIFMFIGLLAKE--GSGITYTRIFVHLLSVTACTMVVIGFKAKYFAAILVLILSVSNFIINSF 255
                      999977777777..78899***********************************998887655 PP

>> YibE_F  YibE/F-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   4.7     0.003        18       2      67 ..     101     165 ..     100     173 .. 0.75
   2 ?   10.7   3.1   4.5e-05      0.27      26      93 ..     188     255 ..     181     264 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.003
      YibE_F   2 llllllfllllllvggkkGlkallslvlnllvlilvllplllkgvspllvalilvilitvvtlllv 67 
                 l ++l+f++ +++v +k+ ++a+ sl++ +l+ ++++ +l  +g   +  + +++ l++v++ +++
  EPX71887.1 101 LCVVLMFVGSTMVVFRKRQVYAIGSLLFVTLLQAFAYGLLT-SGEMFFRNVSVIGGLCLVASDTFI 165
                 67899*************************99999995554.666666555555555555554444 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 4.5e-05
      YibE_F  26 slvlnllvlilvllplllkgvspllvalilvilitvvtlllvngfnkktlaallgtllgvllalllal 93 
                  l   +l++++++ +l+ +g  + ++ +++ +l ++++ ++v gf++k +aa+l  +l+v   ++ ++
  EPX71887.1 188 QLGGRVLLIFMFIGLLAKEGSGITYTRIFVHLLSVTACTMVVIGFKAKYFAAILVLILSVSNFIINSF 255
                 566778899999977777999999999999999999999****************9999977776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       799  (0.0445647); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2117.44
//
Query:       EPX71888.1  [L=99]
Description: 60S ribosomal protein L36 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.7e-40  137.2   3.1    1.9e-40  137.0   3.1    1.0  1  Ribosomal_L36e  Ribosomal protein L36e
  ------ inclusion threshold ------
      0.011   15.8   0.0      0.013   15.6   0.0    1.1  1  TetR_C_9        Tetracyclin repressor-like, C-terminal domain


Domain annotation for each model (and alignments):
>> Ribosomal_L36e  Ribosomal protein L36e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.0   3.1   2.1e-44   1.9e-40       3      95 ..       4      96 ..       2      97 .. 0.98

  Alignments for each domain:
  == domain 1  score: 137.0 bits;  conditional E-value: 2.1e-44
  Ribosomal_L36e  3 glavglnkGhkvtknvsklrpsrrkgrltkrtkfvrdiirevaGfapyerrvmellkvskdKralKfaKkrlgthirakrKreelsnvlaamr 95
                    gl+vglnkG   tk++   rpsrrkg+++krt+fvr+i+revaGfapyerrvmel+++s+dKra+K+aKkrlgt++rak K+eel+ v++++r
      EPX71888.1  4 GLVVGLNKGKALTKRQLPERPSRRKGQQSKRTTFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAKKRLGTLKRAKGKIEELTGVIQSSR 96
                    789**************************************************************************************9987 PP

>> TetR_C_9  Tetracyclin repressor-like, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.6   0.0   1.5e-06     0.013      23      60 ..      50      86 ..      31      96 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 1.5e-06
                TTHHHHHHHHHHHS-HHHHHHHHHHHTHHHHHHHHHHH CS
    TetR_C_9 23 pylyrllaalvrdadeeeakdiadfyllplaraaqrli 60
                py  r ++ l+r+++++ a+++a+  l  l+ra  ++ 
  EPX71888.1 50 PY-ERRVMELIRNSQDKRARKLAKKRLGTLKRAKGKIE 86
                45.57789************************987654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       704  (0.039266); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.28s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 707.43
//
Query:       EPX71889.1  [L=245]
Description: protein kinase activator Mob2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.6e-64  215.0   2.7    8.4e-64  214.6   2.7    1.1  1  Mob1_phocein  Mob1/phocein family


Domain annotation for each model (and alignments):
>> Mob1_phocein  Mob1/phocein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  214.6   2.7   4.7e-68   8.4e-64       3     168 ..      65     231 ..      63     232 .. 0.98

  Alignments for each domain:
  == domain 1  score: 214.6 bits;  conditional E-value: 4.7e-68
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xx RF
  Mob1_phocein   3 tlgsgdlkeavklPkgedlneWlavhvvdffneinllygtisefcteqscptmsagpkyeYlwadeevkkpvklsApeYidllmdwiesqlnd..lf 97 
                    l +g++ ++v+lPk++dl+eWla +v+++f+ +n +y + + fct ++cp+m+ag +++Y+w d++ +kp++l+Ap+Yi++++ wie++l+d  +f
    EPX71889.1  65 HLVKGNFLTIVSLPKYVDLDEWLALNVYELFTYLNHFYDVFTSFCTVDTCPIMQAGTHFDYKWLDNN-RKPLSLPAPQYIEYVLAWIENRLQDqnVF 160
                   68999************************************************************86.***************************** PP

                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Mob1_phocein  98 pskagspfpknflkvvkkilkrlfrvyaHiYihHfeeiaeleleahlntcfkhfvlfvkeFkLidkkelep 168
                   p+kag pfp+nf ++v++i+k++frv+aHiY++H+  i +l+leah+n++f+hf+ f+keF+L+d +++ p
    EPX71889.1 161 PTKAGFPFPTNFHAIVRSIYKQMFRVFAHIYYAHYAGILHLSLEAHWNSFFAHFIAFAKEFHLLDPRDTFP 231
                   *****************************************************************999866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       604  (0.0336884); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.28s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1756.85
//
Query:       EPX71890.1  [L=330]
Description: cytochrome b5 reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.6e-32  110.0   0.0    1.4e-31  109.4   0.0    1.3  1  NAD_binding_1  Oxidoreductase NAD-binding domain
    1.1e-31  109.1   0.0    7.8e-31  106.4   0.0    2.1  2  FAD_binding_6  Oxidoreductase FAD-binding domain
    5.8e-05   23.3   0.0     0.0041   17.3   0.0    2.2  2  NAD_binding_6  Ferric reductase NAD binding domain


Domain annotation for each model (and alignments):
>> NAD_binding_1  Oxidoreductase NAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.4   0.0   2.3e-35   1.4e-31       1     108 [.     200     306 ..     200     307 .. 0.98

  Alignments for each domain:
  == domain 1  score: 109.4 bits;  conditional E-value: 2.3e-35
                    EEEEGGGGHHHHHHHHHHHHHCTTCSEEEEEEEESSGCGSTTHHHHHHHHHHCTTEEEEEEEESSCTTTSSSEESSHHHHHHHHHHHHSSTTEEEE CS
  NAD_binding_1   1 miagGtGiaPvrsvlraileeakdktkvvlvyGnrteedllyreeleelakklpgrlkvvavvsreeagweggkgrvqdalleellslkkeethvy 96 
                    miagGtGi+P+++++ra+l +++d+t+++l+y+n +e+d+++ree+e+la+k p+ ++v +v+++++++w+g  g+v+++l++++ + +++++ v+
     EPX71890.1 200 MIAGGTGITPMLQIIRAVLSNPEDPTQITLLYANVSEKDIILREEIEALAQKDPR-FTVEHVLNNPPENWTGAVGYVTEELIKHHFPAPSADSKVL 294
                    9************************************************999999.**************************************** PP

                    EECSHHHHHHHH CS
  NAD_binding_1  97 vCGppgMikavr 108
                    +CGp +M++avr
     EPX71890.1 295 ICGPTPMVNAVR 306
                    **********98 PP

>> FAD_binding_6  Oxidoreductase FAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.17     1e+03      62      77 ..      15      32 ..       9      40 .. 0.86
   2 !  106.4   0.0   1.3e-34   7.8e-31       3      98 ..      94     189 ..      92     190 .. 0.98

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.17
                   EEEEEEE--..TT-HHHH CS
  FAD_binding_6 62 elellvkvy..pgGkmsq 77
                   + +ll++ +  + G+ms+
     EPX71890.1 15 QYQLLIRLLylKTGEMSK 32
                   6799***9889*****97 PP

  == domain 2  score: 106.4 bits;  conditional E-value: 1.3e-34
                    EEEEEEECCTTEEEEEEEESTTTS-----TT-EEEEEECETTCCEEEEEE.BSSTTECCEEEEEEE--TT-HHHHHHHCS-TT-EEEEEEEE-SEE CS
  FAD_binding_6   3 kltekeevsedtrifrfklpsekqklglpvGqhvflrlkikgeaviRsYtpissenekGelellvkvypgGkmsqaLdelkigdtleikGPlGkfe 98 
                    +l++k  ++++t+i+rf+lp+++++lglpvGqh+ + ++++g++  RsYtp+ss+ +kG+++llvk yp+G +s+ ++elkigd++ ++GP+G+++
     EPX71890.1  94 ELSDKAVLNHNTAIYRFRLPRSNDVLGLPVGQHLTVVVEVDGKQHSRSYTPLSSDADKGYFDLLVKAYPNGIVSKKISELKIGDKIGVRGPKGNWK 189
                    7999******************************************************************************************97 PP

>> NAD_binding_6  Ferric reductase NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   6.8e-07    0.0041       6      49 ..     200     239 ..     196     260 .. 0.79
   2 !    3.9   0.0     0.009        54     133     155 ..     287     309 ..     275     310 .. 0.79

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 6.8e-07
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  NAD_binding_6   6 lvagGiGitpfisilkdllkkskkealktkkikliwvvresssl 49 
                    ++agG+Gitp++ i++ +l + +    + ++i+l  ++ +++++
     EPX71890.1 200 MIAGGTGITPMLQIIRAVLSNPE----DPTQITLLYANVSEKDI 239
                    9*********************9....88888888887766665 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.009
                    xxxxxxxxxxxxxxxxxxxxxxx RF
  NAD_binding_6 133 knssvgvfvCGppklvkevkklv 155
                    +++   v++CGp+ +v+ v++++
     EPX71890.1 287 PSADSKVLICGPTPMVNAVRQAT 309
                    5566679************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       531  (0.0296168); expected 358.6 (0.02)
Passed bias filter:                      499  (0.027832); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2394.65
//
Query:       EPX71891.1  [L=442]
Description: mannan endo-1,6-alpha-mannosidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   2.9e-145  484.4  21.0   3.4e-145  484.2  21.0    1.0  1  Glyco_hydro_76  Glycosyl hydrolase family 76
     0.0035   16.5  12.1       0.09   11.8   1.2    3.2  3  Glyco_hydro_88  Glycosyl Hydrolase Family 88
  ------ inclusion threshold ------
        0.1   12.1   0.0       0.18   11.3   0.0    1.3  1  DUF1122         Protein of unknown function (DUF1122)


Domain annotation for each model (and alignments):
>> Glyco_hydro_76  Glycosyl hydrolase family 76
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  484.2  21.0  5.6e-149  3.4e-145       1     359 [.      29     388 ..      29     395 .. 0.98

  Alignments for each domain:
  == domain 1  score: 484.2 bits;  conditional E-value: 5.6e-149
                     SXHHHHHHHHHHHHHHCETTECCTCTCBSCES-GHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHCCCTCEE-SSSTTCTCSSEHHHHHHHHHH CS
  Glyco_hydro_76   1 siksaaatiakgllkyYkgnesggtpgnlpdpyywWeagalfgalidywrltgdstyndlitqallaqagenydympanqsrtegnDDqafwgla 95 
                     s+++a+  +a+g+l+yY g+e+ggt g++ +p ywWeaga+++ l++++ +tg+styn+l++ +l +qagen+dymp+n+s++egnDDqafwgla
      EPX71891.1  29 SVDEATGLVADGMLDYYAGYEKGGTTGMFLPPAYWWEAGAAWNGLLNTYLATGNSTYNNLVKTSLSYQAGENSDYMPSNYSTSEGNDDQAFWGLA 123
                     6889999**************************************************************************************** PP

                     HHHHHHH......H--HHHHHHHHHHHHHHHHCB-SCSCCS-BBSEC..ESS--SEEEHHHHHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHH CS
  Glyco_hydro_76  96 amtaaernfpep.tdepswLalAqavfntqasrwdeetcgGGlrWqiftwnsgydyknsisngplfqlaarLarytgnetYlewAekvwdWvedv 189
                     a++aae nf++p  +ep+wL+lAq+vfn+q++rwd+++c+GG+rWqi ++nsg +ykns+ ng++fqlaarLar+tgn+tY++wAek +dW+++v
      EPX71891.1 124 AISAAESNFTNPkANEPQWLELAQSVFNQQVTRWDNSHCNGGIRWQITQFNSGFNYKNSVTNGAFFQLAARLARFTGNDTYTQWAEKAYDWSVNV 218
                     *********************************************************************************************** PP

                     SCSBTTTS-B-SEEETTTCCEEEE---HHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHCEECTTEEEEEE-TTSTTCCTTHHHHHHHH CS
  Glyco_hydro_76 190 gliddedwlvyDgasvednctdinklqwtYnqGtylsgaaylynaTgdekWldrvkgllnatlstffpdgnilyevacepsekcnnDqrsFkgil 284
                     g+i  +d++vyDg  ++dnc+++++++w+Yn+G+y++g a+lyn+Tg+++W++r++g++n++ + ff + ++lye ace s +cn Dq+sFkg+l
      EPX71891.1 219 GFI-RDDYSVYDGSLIKDNCSALETTEWSYNSGLYMAGTAFLYNYTGSSVWKTRTEGFVNKSIDLFFRN-DVLYEPACELSGSCNYDQTSFKGFL 311
                     ***.*****************************************************************.************************* PP

                     HHHHHHHH..SHHHHHHHHHHHHHHHHHHHTTTB...TTTSB-TTTT..TSSCCHHHHHHHHCCHHH.......... CS
  Glyco_hydro_76 285 arwlaltaqlapetadtiepllrasaeaaakscsggsdgttcglkwl..kgtwdgdaglgeqmsaleviqallveek 359
                     ar++ +ta++ap+t ++ie+ l ++a aaa +c ggsdg tcg++w+  ++twdg +glgeq+sale+iq  l+ ++
      EPX71891.1 312 ARFMVYTAHMAPFTLSKIETCLSKTAIAAAGACCGGSDGVTCGFQWWwmNNTWDGLYGLGEQLSALEAIQGPLLLQN 388
                     **********************************************954589******************9998775 PP

>> Glyco_hydro_88  Glycosyl Hydrolase Family 88
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   1.2   1.5e-05      0.09      27      67 ..      62     102 ..      44     161 .. 0.74
   2 !    5.0   0.4    0.0018        11      23      62 ..     179     216 ..     153     227 .. 0.77
   3 !    5.8   0.4     0.001         6      23      62 ..     241     280 ..     229     289 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 1.5e-05
                     E.HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHCCCTTS- CS
  Glyco_hydro_88  27 wewtnGvflsglleayeatgdkeyldyakawadslideggk 67 
                     + w+ G++++gll+ y atg+++y +++k+  + +  e+  
      EPX71891.1  62 YWWEAGAAWNGLLNTYLATGNSTYNNLVKTSLSYQAGENSD 102
                     34**************************9965544444433 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.0018
                     TTCCE.HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHCC CS
  Glyco_hydro_88  23 kenewewtnGvflsglleayeatgdkeyldyakawadsli 62 
                      +n    tnG+f++  ++++  tg+++y+++a++ +d+ +
      EPX71891.1 179 YKNS--VTNGAFFQLAARLARFTGNDTYTQWAEKAYDWSV 216
                     3333..5899999999999999999999999999888755 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.001
                     TTCCE.HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHCC CS
  Glyco_hydro_88  23 kenewewtnGvflsglleayeatgdkeyldyakawadsli 62 
                     ++ ew ++ G+++ g + +y++tg +  +  ++  +++ i
      EPX71891.1 241 ETTEWSYNSGLYMAGTAFLYNYTGSSVWKTRTEGFVNKSI 280
                     5689********************9988777777776655 PP

>> DUF1122  Protein of unknown function (DUF1122)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   2.9e-05      0.18      11      72 ..     170     230 ..     164     244 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 2.9e-05
                 E-SSTTEEEEEEEETT....EEEEEEEEE--BTTB--EEEEES--G.......GGHHHHTTS CS
     DUF1122  11 qgrfkeevnlevyverdeakkellalkvFeGRdlyrpWiEifniswlreveldsltavffgs 72 
                  ++f+  +n++ +v ++ + +   +l  F+G d y +W E  +  w+ +v++    + ++++
  EPX71891.1 170 ITQFNSGFNYKNSVTNGAFFQLAARLARFTGNDTYTQWAEKAYD-WSVNVGFIRDDYSVYDG 230
                 5899999*********************************8887.*9999997777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (442 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       353  (0.0196888); expected 358.6 (0.02)
Passed bias filter:                      223  (0.0124379); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.67u 0.29s 00:00:00.96 Elapsed: 00:00:00.56
# Mc/sec: 2387.64
//
Query:       EPX71892.1  [L=194]
Description: kinetochore protein Mis18 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.6e-23   81.4   0.5    7.6e-23   80.7   0.5    1.3  1  Yippee-Mis18  Yippee zinc-binding/DNA-binding /Mis18, centrom
  ------ inclusion threshold ------
      0.028   14.6   0.3        5.6    7.2   0.0    2.3  2  CxC7          CxC7 like cysteine cluster associated with KDZ 


Domain annotation for each model (and alignments):
>> Yippee-Mis18  Yippee zinc-binding/DNA-binding /Mis18, centromere assembly
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.7   0.5   8.5e-27   7.6e-23       1     101 [.      21     122 ..      21     125 .. 0.93

  Alignments for each domain:
  == domain 1  score: 80.7 bits;  conditional E-value: 8.5e-27
                   EEEEETTTS-EEEECCCEEEEECCCEEEES---CCCEEEECEEEETTS.TTEEEEEEEETTT--EEEEEEEECSCCCCCCCTCEEEEGGGEEEEESS CS
  Yippee-Mis18   1 lvfqCkkCktilgdslqlvsegralnivvlkkvtrnvvvgkelvtdee.gkctystlsCkgCnsvlGwkYksteeelkykrglfiletkaitsyslg 96 
                   +vfqCk+C +i+gds+++v ++r++  ++l+  ++n    +el + ++ g c ys ++C++Cn+ +G +++st++ l+++r++++l++++i+ y++g
    EPX71892.1  21 TVFQCKNCLQIVGDSNAWVISHREMGSFTLSDLAENTFDIEELLRTSDdGLCVYSLIKCTKCNTSIGCVFRSTPRYLDDIRDMYTLTMDKISAYEIG 117
                   59*******************************999998888888866366*********************************************9 PP

                   SSXXX CS
  Yippee-Mis18  97 ekeee 101
                    k+ +
    EPX71892.1 118 AKTVN 122
                   98866 PP

>> CxC7  CxC7 like cysteine cluster associated with KDZ transposases
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.0   0.00063       5.6       7      40 ..      10      43 ..       6      50 .. 0.78
   2 ?    5.2   0.2    0.0027        24      17      27 ..      74      84 ..      69     102 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.00063
        CxC7  7 edykkefrvPfsliecsecgdifkdspvGyvGdG 40
                e+  ++f  P ++ +c +c +i  ds +  + + 
  EPX71892.1 10 ESADNDFESPPTVFQCKNCLQIVGDSNAWVISHR 43
                667788999****************966555554 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0027
        CxC7 17 fsliecsecgd 27
                +sli+c++c+ 
  EPX71892.1 74 YSLIKCTKCNT 84
                9********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       837  (0.0466841); expected 358.6 (0.02)
Passed bias filter:                      527  (0.0293937); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.28s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 1342.45
//
Query:       EPX71893.1  [L=879]
Description: DNA repair endonuclease XPF [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.5e-19   70.7   0.9    6.1e-19   68.8   0.0    2.2  2  ERCC4           ERCC4 domain
  ------ inclusion threshold ------
       0.52   11.0   3.8        9.4    6.9   0.0    2.5  2  NAM-associated  No apical meristem-associated C-terminal doma


Domain annotation for each model (and alignments):
>> ERCC4  ERCC4 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.3      0.15   1.4e+03      56     110 ..     402     462 ..     368     524 .. 0.61
   2 !   68.8   0.0   6.8e-23   6.1e-19       1     149 [.     657     780 ..     657     786 .. 0.89

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.15
                 ...........EEEEEEEHHHHHHHHCC.SHHHHHHHHHHH.H-SEEEEEEES-GGGTT....... CS
       ERCC4  56 k..........vlverksaddlvasikd.grleeqvsrlkrngykkpillvegldqykrknknsrn 110
                 +          +  ++ s++++ + ++d  +++eq + ++r      i  +e  ++ k++ +   +
  EPX71893.1 402 ClqlrdylstiHYDNKESFKMMNNRLMDyFHWREQYRNMSR-----SISKIEKTSKEKQNAPDVSR 462
                 04444444455666777888888888774455555555544.....55556665555555544444 PP

  == domain 2  score: 68.8 bits;  conditional E-value: 6.8e-23
                 EEGGGCTSHHHH..HHTTTSEEEEE--SSSSE.EE...CTT...............EEEEEEEHHHHHHHHCCSHHHHHHHHHHH.H-SEEEEEEES.- CS
       ERCC4   1 iDsrelksgieeylleelgvevvietlpigdyilwrrkvkaeynleldieepceekvlverksaddlvasikdgrleeqvsrlkrngykkpillveg.l 98 
                 +D re++s+++   l+ ++++v++++l +gdy ++   +++               ++verks++dl++s+++grl++q++ + + +y+ p+ll+e   
  EPX71893.1 657 VDLREFRSSLPSI-LHGNNFSVIPCQLVVGDY-VL---SPN---------------ICVERKSIRDLIQSLSSGRLYSQCEAMLE-HYEIPVLLIEFeQ 734
                 79***********.******************.**...9**...............*****************************.*********9974 PP

                 GGGTT.................THHH.HHHHHHHHHHHH.S-EEEEESSHHHH CS
       ERCC4  99 dqykrk.nknsrnkqykakvrqinrktiesaLvqlqldf.gvsilttesanet 149
                 +q + +   ++ +         i +++++s+Lv l+l f +++il+++sa  t
  EPX71893.1 735 NQTFTSpPFSDLSTE-------IGKSDVQSKLVLLTLAFpKLRILWSSSAYAT 780
                 444444033333333.......9999**********************98766 PP

>> NAM-associated  No apical meristem-associated C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.0     0.001       9.4       6      44 ..     351     389 ..     349     399 .. 0.70
   2 ?    3.0   2.0     0.017   1.6e+02      18      72 ..     433     490 ..     425     497 .. 0.59

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.001
  NAM-associated   6 lhcWnlLknepKWkdqydelkkkrkpkssassspatsss 44 
                     + ++ +L+++pKW  ++d l++   +    +s+ ++ss+
      EPX71893.1 351 DEYYPVLEEQPKWSVLRDILQEISHENVLNESNDPDSST 389
                     679************999988864444444444333333 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.017
  NAM-associated  18 Wkdqydelkkk....rkpkssassspatsssestdeedssesssesseesaadsestss 72 
                     W++qy++++++    +k+++++++ p+ s  ++++  ++   ++  + +s +++es ++
      EPX71893.1 433 WREQYRNMSRSiskiEKTSKEKQNAPDVSRRAAPAS-KRRRVRGGGTATSRSTPESNTT 490
                     999999999999966555555555555555544443.3333333444444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (879 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       633  (0.0353059); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.27s 00:00:00.95 Elapsed: 00:00:00.43
# Mc/sec: 6077.54
//
Query:       EPX71894.1  [L=1009]
Description: ATP-dependent RNA helicase Prp11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-49  168.0   0.0    5.2e-48  163.1   0.0    2.6  3  DEAD        DEAD/DEAH box helicase
    1.2e-27   96.5   0.0    3.7e-27   94.9   0.0    1.9  1  Helicase_C  Helicase conserved C-terminal domain
     0.0045   17.0   0.0      0.018   15.1   0.0    2.0  2  ResIII      Type III restriction enzyme, res subunit
  ------ inclusion threshold ------
      0.081   13.1   0.1       0.19   11.9   0.1    1.6  1  CdAMP_rec   Cyclic-di-AMP receptor


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.1   0.0   1.2e-51   5.2e-48       1     174 [.     436     608 ..     436     610 .. 0.94
   2 ?    1.7   0.0     0.042   1.9e+02      35     105 ..     652     720 ..     645     735 .. 0.76
   3 ?   -3.2   0.0       1.4   6.2e+03     100     142 ..     763     803 ..     757     811 .. 0.53

  Alignments for each domain:
  == domain 1  score: 163.1 bits;  conditional E-value: 1.2e-51
                 -HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHS...TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   1 tdiQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyet...kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldn 96 
                 t+iQ +aip+i +g+dv++ a+TGsGKT afl+p+++++ ++   ++ +gp a++++PtreLa q+++++k f k ++lr+++ +gg + +dq+++l++
  EPX71894.1 436 TSIQCQAIPAISSGRDVIGVAKTGSGKTIAFLLPMFRHIRDQrplRNGEGPIAILMTPTRELAVQIHRECKPFAKALNLRAVCAYGGAPIKDQIAELKR 534
                 78*************************************8889999***************************************************99 PP

                 TCSEEEEEHHHHHHHH..HCTS.SHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHHH CS
                 xxxxxxxxxxxxxxxx..xxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  97 gvdivvgtpgrlddll..stgk.lnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkdvk 174
                 g++ivv tpgr++d+l  ++g+  nl+++++lVlDEadr+ d gf++++ ri+n++       + +rq++++SAT+p+ ++
  EPX71894.1 535 GAEIVVCTPGRMIDVLsaNQGRvSNLHRCTYLVLDEADRMFDLGFEPQVMRIINNV-------RPSRQTVLFSATFPRAME 608
                 9*************99775666345*******************************.......45788*********8876 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.042
                 HHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHH...HTT.CSEEEEEH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxx.xxxxxxxx RF
        DEAD  35 vlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskl...dng.vdivvgtp 105
                 +l ++y+  +k   ++l+ +  +e a   +++l k++     + ++i gg++++d  s++   ++g  d++++t 
  EPX71894.1 652 LLGELYN--TKADVRTLVFVDRQEAADALFSDLMKRGY----SSCSIHGGKDQNDRDSTIsdyKAGvFDVLIATS 720
                 5556665..88889999999999999999999999988....578999999999998888432355888888886 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 1.4
                 EEEEEHHHHHHHH.HCTSSHCTTEEEEEEETHHHHHHTTTHHHH CS
                 xxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 100 ivvgtpgrlddll.stgklnlsqvrflVlDEadrlldqgfsdfi 142
                 +++ tp++    +  t+ l+ls+    V DE  +l dq f d++
  EPX71894.1 763 VTFITPEQDKYAVdITKALTLSK--QHVPDELRKLADQ-FLDKV 803
                 55556666555553344433333..3556666666665.55544 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.9   0.0   8.2e-31   3.7e-27       5     111 .]     648     757 ..     644     757 .. 0.90

  Alignments for each domain:
  == domain 1  score: 94.9 bits;  conditional E-value: 8.2e-31
                 HHHHHH...HHTTTTSEEEEEESSHHHHHH..HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHH CS
  Helicase_C   5 allell...kleeeggkilifvntidrlek..vklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvt 98 
                 +llell    +++ + ++l+fv +++ ++    +l+  k+g++++ +hg   qn+r+ +++++++g +dvLiat+va+rG+d+++++lV+n+d+p  ++
  EPX71894.1 648 RLLELLgelYNTKADVRTLVFVDRQEAADAlfSDLM--KRGYSSCSIHGGKDQNDRDSTISDYKAGVFDVLIATSVAARGLDVKSLQLVVNYDCPNHME 744
                 5666666667899999**********9995544445..88*********************************************************** PP

                 HHHHHHTTSSSTT CS
  Helicase_C  99 syiqriGRtgRag 111
                 +y++r+GRtgRag
  EPX71894.1 745 DYVHRVGRTGRAG 757
                 ***********97 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0     4e-06     0.018      28     170 ..     453     604 ..     433     605 .. 0.72
   2 ?   -2.1   0.0      0.72   3.2e+03      46      81 ..     654     689 ..     647     719 .. 0.67

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 4e-06
                 EEEESTTSTHHHHH.HHHHHHH-S..........-EEEEESSHHHHHHHHHHGGGGTGG.....GEEEESSS-B--.......-SEEEEEHHHHHHTH. CS
      ResIII  28 likmaTGtGKTlva.aklierllkkgkee.....kflflvprkslleqtleefkkflseayke.igkkvsgdkkkakekdstnkkilvttiqsldadse 119
                 + ++ TG+GKT+   + + ++++ +++ +      ++++ p+++l  q  +e k f++  + + ++       k++ ++ +  ++i+v t  ++   + 
  EPX71894.1 453 IGVAKTGSGKTIAFlLPMFRHIRDQRPLRngegpIAILMTPTRELAVQIHRECKPFAKALNLRaVCAYGGAPIKDQIAELKRGAEIVVCTPGRMIDVL- 550
                 55789********9555556666666655999999***********************9988874444333333333556788899999998777666. PP

                 .......HHHTTT-SEEEEETGGGTTS....TTTHHHHHT---.SEEEEEESS-S CS
      ResIII 120 eeeeeseellrdrfdviiiDEaHrlgak...kswreilekfke.avllglTATpe 170
                    ++      +r  +++ DEa r+ +     ++ +i++++++    + ++AT++
  EPX71894.1 551 -SANQGRVSNLHRCTYLVLDEADRMFDLgfePQVMRIINNVRPsRQTVLFSATFP 604
                 .133334444455559********99975544677766666553677899**987 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.72
                 HHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG. CS
      ResIII  46 erllkkgkeekflflvprkslleqtleefkkflsea 81 
                  +l++ +   ++l++v+r++  + + ++++k   + 
  EPX71894.1 654 GELYNTKADVRTLVFVDRQEAADALFSDLMKRGYSS 689
                 456666666699*****9998888887776655544 PP

>> CdAMP_rec  Cyclic-di-AMP receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   4.3e-05      0.19      55     108 ..     582     638 ..     564     639 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 4.3e-05
                 HHHHHHHHC---EEEE-----...TTTTTTTT--SS--EEEEESEEEEEEE-SEEEE CS
   CdAMP_rec  55 evlsiikekcktreqlvasss...plgesadsyvpkpvevevGGatvfvldvekfvk 108
                 +v+ ii++   +r+ ++ s++   ++   a ++++kp+e++vGG  v   +ve+ v+
  EPX71894.1 582 QVMRIINNVRPSRQTVLFSATfprAMEALARKVLKKPIEITVGGRSVVASEVEQIVE 638
                 7999****999999988665422268888999********************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1009 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       801  (0.0446762); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.89u 0.33s 00:00:01.22 Elapsed: 00:00:00.56
# Mc/sec: 5459.67
//
Query:       EPX71895.1  [L=288]
Description: DNAJ domain-containing protein Cwf23 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-23   82.2   1.0    5.8e-23   80.8   1.0    1.8  1  DnaJ      DnaJ domain


Domain annotation for each model (and alignments):
>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.8   1.0   3.2e-27   5.8e-23       1      63 []       9      71 ..       9      71 .. 0.99

  Alignments for each domain:
  == domain 1  score: 80.8 bits;  conditional E-value: 3.2e-27
                HHHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHHHHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ  1 dyYeiLgvskdasedeIkkaYrklalkyHPDknpkdpeaeekFkeineAyevLsdpekRkqYD 63
                dyYe+Lg+s+ a++++I +a+rk +lkyHPDknp+dp+a+ekF+ ++ Ay+ L+d + R++YD
  EPX71895.1  9 DYYELLGISEGAQDADIHRAWRKTSLKYHPDKNPDDPNAAEKFHLLQVAYNALTDTKTRQAYD 71
                8*************************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1642  (0.0915835); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2092.19
//
Query:       EPX71896.1  [L=127]
Description: mediator complex subunit Med31 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-37  126.6   6.1    3.3e-37  126.4   6.1    1.0  1  Med31     SOH1


Domain annotation for each model (and alignments):
>> Med31  SOH1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.4   6.1   1.8e-41   3.3e-37       2      92 ..      15     105 ..      14     108 .. 0.98

  Alignments for each domain:
  == domain 1  score: 126.4 bits;  conditional E-value: 1.8e-41
                 HHHHHHHHHHHHHCSHHHHHHTTSSSSSSSTHHHHHHHGGGGGSTTCCCTT--CHHHHHHHHHHSSTTCCCCTCTCHHHHHHHHHHHHH-X CS
       Med31   2 krFeleleFvqsLanpaYlshLaqekyledeafiaYLkYLeywkepeYakfltyPqcLkaLellqeeefrkelkkpevvealekqqllewq 92 
                 +rFe+eleFvq+L+np+Yl++Laq++y+ede+f++YL+YLeyw+epeY+kf+ yP+cL++L+ll++++fr +++++++ +++++++++ew 
  EPX71896.1  15 SRFEIELEFVQMLSNPWYLNFLAQHNYFEDESFLQYLEYLEYWREPEYVKFIIYPTCLHMLTLLKNPQFRIDISRADLSKQVNDEMYYEWL 105
                 7***************************************************************************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       485  (0.0270511); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 968.49
//
Query:       EPX71897.1  [L=175]
Description: eukaryotic protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-21   76.1   2.1    1.9e-21   75.4   2.1    1.3  1  Oxidored-like  Oxidoreductase-like protein, N-terminal


Domain annotation for each model (and alignments):
>> Oxidored-like  Oxidoreductase-like protein, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.4   2.1   1.1e-25   1.9e-21       2      45 ..      84     127 ..      83     128 .. 0.96

  Alignments for each domain:
  == domain 1  score: 75.4 bits;  conditional E-value: 1.1e-25
  Oxidored-like   2 iaGvlvPpkPeePdnCCmSGCvnCVwdlYredleewkealkear 45 
                    ++G++vPpkPeeP nCC+SGC  CVwd++++dlee+++a+++a+
     EPX71897.1  84 YNGIRVPPKPEEPLNCCQSGCSICVWDVFADDLEEYNQARRKAK 127
                    78****************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       566  (0.031569); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.26s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1362.39
//
Query:       EPX71898.1  [L=290]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.5e-27   94.5   0.0    9.3e-27   94.0   0.0    1.2  1  DUF4448   Protein of unknown function (DUF4448)


Domain annotation for each model (and alignments):
>> DUF4448  Protein of unknown function (DUF4448)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.0   0.0   5.2e-31   9.3e-27       8     188 ..      69     233 ..      64     234 .. 0.94

  Alignments for each domain:
  == domain 1  score: 94.0 bits;  conditional E-value: 5.2e-31
     DUF4448   8 gpfirCtpdrynkkgssePFCtPkegselkvgktYyiTWdprfFdekenekVkihlsyvkestkekglkksffssdwlpnsdGfypltvdeewlkgkks 106
                   + +C+p++y   +s+ P+C P+ gs++  gk   +TWdp +F    +++ ++ ls+ + s   +        +++++n+dG ++l+++++wl+g+  
  EPX71898.1  69 DTYYNCHPQKYY--QSDIPICLPTPGSRWIKGKPQRVTWDPVYF---GVDELRLVLSFQNDSGLIAM-------DKKIKNKDGEINLKPNDKWLHGDFL 155
                 56789*****98..9*****************************...8**************98864.......467********************** PP

     DUF4448 107 ervtivlvslqpdnvkdeveikkGpkVsltkkedlkkledkeseegkkaekyalaialPvvvvvlvlgligfvlwnrkkrdi 188
                 +++t+ l+++++     ++++ +Gp ++l+k  d ++  +++ +   ++++ + aia+P +++ ++l +++++++ +++++i
  EPX71898.1 156 QNLTVNLITVDEG----NATFVSGPNITLQKTLDPHEQRAEDYDFYAPKRNLKAAIAVPSIFLGIILTILLYHTYRKDTWKI 233
                 ***********99....57****************9999999**********************************999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       479  (0.0267165); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2063.45
//
Query:       EPX71899.1  [L=531]
Description: tyrosyl-DNA phosphodiesterase Tdp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   3.8e-109  365.4   0.5   5.2e-109  364.9   0.5    1.2  1  Tyr-DNA_phospho  Tyrosyl-DNA phosphodiesterase


Domain annotation for each model (and alignments):
>> Tyr-DNA_phospho  Tyrosyl-DNA phosphodiesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  364.9   0.5  2.9e-113  5.2e-109       1     423 [.      23     503 ..      23     504 .. 0.88

  Alignments for each domain:
  == domain 1  score: 364.9 bits;  conditional E-value: 2.9e-113
                      EEE--TTTT----------EE-HHHHH--TTEEEEEEE-S-EEHHHHHTTS.-T-...-EEEEEE..............ETTSEE-.TEEEEEE CS
  Tyr-DNA_phospho   1 plkltkirdlpeesernkdtitlkdilgdplleeavqfnFlfdlefllsqldedvrrkvkvvivhgakkeedeererleekakryp.nveliea 93 
                      p++l++i +lp+e+  n+++++lk+++g+p+l++++qfnF++dl+f+l++++++v r+v++ i hg +k +d + +rl+ ++++ p +v+l ++
       EPX71899.1  23 PIYLNQIASLPKEE--NVHCLSLKQLIGSPQLKQTWQFNFCVDLNFILENIHPKVFRTVDIRITHGYDKTSD-SLARLTAQKEHCPiHVHLYSV 113
                      68899******666..99************************************************877777.777888777777758****** PP

                      ---.TT--B---EEEEEETTSEEEEEEESS-BSHHHHHSSB-EEEE---EEE.......................................... CS
  Tyr-DNA_phospho  94 kmpepfgthHsKmmilfyeddslrvvihtaNlieaDwgnmtqgvwrspllpl.....................................le.ss 149
                      ++p ++gthHsK+mi+f+ed+s+++vihtaN++e Dw  m+q++++ pll                                       +e   
       EPX71899.1 114 YVP-MWGTHHSKIMINFFEDESCQIVIHTANMVEPDWIGMSQAIYKTPLLFPksrgtpsvstvpvdeedtlrkkmksdveivdvdaetdDEsPL 206
                      ***.9*******************************************99888********************************998844366 PP

                      ..S--SS--HHHHHHHHHHHTT..-HHHHTHHHHHTEE-GGGT-EEEEE---TTS--.....HHHHHHHHHHHTCT..T----....EEEEEEE CS
  Tyr-DNA_phospho 150 keseeesgtrFkrdLleYLkaygkkklkklieklkkyDfsevrvaliaSvPgrhkgs.ktkwGlakLkkalkelplekeeksk....eleivaq 238
                      +++ ++ g++F++d+l+YL++y+++  k+li+klk+yDfs+vr+ + +S+Pg++ g+ +t+wGl +Lk++l+e + ++++k k    +  +v q
       EPX71899.1 207 ESEMNSIGQQFQEDFLNYLSNYNHT--KELINKLKDYDFSNVRAVFLGSIPGKFMGDkETQWGLGRLKHVLREAEKKENKKGKrfldTDVCVSQ 298
                      77778889**************666..************************************************966666668897778899* PP

                      -SBB---S-.SSS---HHHHTHHHHHTTSS---HHHHHTEEEE..EE--BSGGGTTSTTGGGGGGG-B---...SGGHHHHHH..HTS--EEEE CS
  Tyr-DNA_phospho 239 vSSigslgstekwlknefleslspalqgkdkskeeeekkskpkfkiifPtveevrrsldgyasggsihfkiqsaqqqkqleel..kpylckwkq 330
                      +SS+gs+g+++ +l +e++e+++ ++                ++k+ifPtv ++++s+ g++sg+sihf+i   ++ +q+e l  ++ l+kw +
       EPX71899.1 299 CSSMGSFGPKQDYL-EELMEAFHCKR---------------NQWKFIFPTVGQIQQSMLGWQSGSSIHFNILGKTSMEQVEDLrrNHNLYKWGS 376
                      *********43333.44555555444...............3466**************************************987779***** PP

                      -TT..TTTTT--B--EEEEEE--STTSEESEEEEES--BSHHHH--S...........SS--SSBEEEEEEEGG.................... CS
  Tyr-DNA_phospho 331 dseeeagRkraapHiKtyirfssktlkkidWalltSaNLSkqAWGeleka....ke..elrirsyElGVlvlpk.................... 398
                          +agR+r+apHiKty+r+ +++ ++i+Wal+tSaNLSk AWG++e +    k+   lri+syE+GVl+ p+                    
       EPX71899.1 377 ---MKAGRERIAPHIKTYLRL-NESGDRIRWALVTSANLSKPAWGTMEGKgvksKTarGLRIKSYEAGVLFFPQlfensggtnspicsmvptyk 466
                      ...88****************.7788*********************944454433569***************99888888777777777665 PP

                      ......................------SEEESS-SSEEE- CS
  Tyr-DNA_phospho 399 ....kdlpee............eektevgvrvPydlplepY 423
                          +    +            +++ ++g+r+ +d+p+++Y
       EPX71899.1 467 tnspE----PvirstkenldnpKSQLQIGFRMCWDFPPKEY 503
                      44440....2666666667778999***************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (531 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       649  (0.0361983); expected 358.6 (0.02)
Passed bias filter:                      545  (0.0303977); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.41
# Mc/sec: 3916.58
//
Query:       EPX71900.1  [L=1210]
Description: C2 domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      9e-32  109.4   0.2      2e-15   56.9   0.0    3.2  3  C2        C2 domain


Domain annotation for each model (and alignments):
>> C2  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.9   0.0   1.1e-19     2e-15       3      92 ..     471     565 ..     469     573 .. 0.93
   2 !   48.8   0.0   3.7e-17   6.6e-13       1     103 []     653     783 ..     653     783 .. 0.82
   3 ?   -1.9   0.0      0.23   4.2e+03      24      47 ..     838     859 ..     823     866 .. 0.77

  Alignments for each domain:
  == domain 1  score: 56.9 bits;  conditional E-value: 1.1e-19
                 EEEEEEEEESSSSSSTTSSCEEEEEEEE..ECEEEEEE-SCSSSSSSEEEEEEEEEESC...HTTSEEEEEEEEECSSSTEEEEEEEEEEGHHHH CS
          C2   3 levtvieAknLpnkdkkgssdpyvkvsl..dgkqkakTrviknslnPvWnekftfevae...leeakLeveVfdndrlskddfiGkveiplstll 92 
                 + +++ +A++L ++d++g sd+y+++ +   gk  ++Trvik+ lnP+W+e  +++v +   ++ +k+ +e++d+dr+s dd++G+++++l  l 
  EPX71900.1 471 IYIYIEKAEGLSKQDVNGLSDAYITIGYykFGKPLFCTRVIKQDLNPIWKEYAVIPVFPehlKAGEKVSIELWDSDRFSPDDVVGRTKVDLHVLF 565
                 6799**********************99999**************************999*****************************998755 PP

  == domain 2  score: 48.8 bits;  conditional E-value: 3.7e-17
                 TEEEEEEEEEESSSSSSTTSS...........................CEEEEEEEEECEEEEEE-SCSSSSSSEEE...EEEEEEESCHTTSEEEEEE CS
          C2   1 gklevtvieAknLpnkdkkgs...........................sdpyvkvsldgkqkakTrviknslnPvWn...ekftfevaeleeakLeveV 69 
                 g+l++t+++A nL+     g+                           +++yv+v+++++  +kTr++  s nP++n   ekf  ++++   + ++++V
  EPX71900.1 653 GILSFTIHQAVNLEISHPRGTygkvkgtyntsppqdvgdvkseeggdlPSSYVCVDINDSLAYKTRTKVYSSNPIYNagsEKFIKDWRN---TIICFTV 748
                 6899*********88855333444444466667777777777788888*********999999999996676****8666777777777...******* PP

                 EEECSSSTEEEEEEEEEEGHH.HHTTHHHHEEEEH CS
          C2  70 fdndrlskddfiGkveiplst.llsgeeaegwypl 103
                  +++  ++d+++G+v+ipls+ l+s +++++w+p+
  EPX71900.1 749 RNFRLREHDSILGTVNIPLSKtLTSFSQITKWFPV 783
                 *****88888**********999999*******96 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 0.23
                 EEEEEEEECEEEEEE-SCSSSSSS CS
          C2  24 pyvkvsldgkqkakTrviknslnP 47 
                 +yv+++  g qk  T+ + ++ +P
  EPX71900.1 838 SYVRINA-GMQKSSTKYVTSE-SP 859
                 5999999.*******965554.66 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1210 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1138  (0.0634726); expected 358.6 (0.02)
Passed bias filter:                      557  (0.031067); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.87u 0.29s 00:00:01.15 Elapsed: 00:00:00.46
# Mc/sec: 7885.38
//
Query:       EPX71901.1  [L=842]
Description: translation elongation factor 2 Eft2,B [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.7e-65  218.8   0.1    6.8e-65  218.3   0.1    1.2  1  GTP_EFTU     Elongation factor Tu GTP binding domain
      1e-30  106.0   0.0    2.7e-30  104.6   0.0    1.8  2  EFG_IV       Elongation factor G, domain IV
      2e-19   69.4   0.0    5.2e-19   68.1   0.0    1.7  1  EFG_C        Elongation factor G C-terminus
    1.5e-13   50.6   0.0    3.6e-13   49.4   0.0    1.6  1  EFG_II       Elongation Factor G, domain II
    6.4e-13   48.9   0.0    1.7e-12   47.5   0.0    1.8  1  GTP_EFTU_D2  Elongation factor Tu domain 2
    0.00031   20.8   0.1    0.00065   19.8   0.1    1.6  1  MMR_HSR1     50S ribosome-binding GTPase


Domain annotation for each model (and alignments):
>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  218.3   0.1   2.3e-68   6.8e-65       2     194 .]      18     344 ..      17     344 .. 0.93

  Alignments for each domain:
  == domain 1  score: 218.3 bits;  conditional E-value: 2.3e-68
                 CEEEEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHHHHHSTHCHSHHHHHHTSCSSCEEEEEE..............TTCSSEEEEEEEESSSGGGHHH CS
    GTP_EFTU   2 rirnigiighvDhGKtTLtdrLlyktgaiskkgekaeeervlDtlkeErergiTiksaaisle..............ketkkylinliDtPGHvdFske 86 
                 ++rn+++i+hvDhGK+TLtd+L++k+g+is   +ka+++r++Dt+++E+erg+Tiks+aisl+              ++  ++l+nliD+PGHvdFs+e
  EPX71901.1  18 NVRNMSVIAHVDHGKSTLTDSLVQKAGIISA--AKAGDARFMDTRADEQERGVTIKSTAISLFaemsqddlkdvkepTTHPDFLVNLIDSPGHVDFSSE 114
                 79*****************************..778889***********************************9766999****************** PP

                 HHHHHHT-SEEEEEEETTTBSTHHHHHHHHHHHHTTTEEEEEEESCGSTHHHHHHHHHHHHHHHHHH...............HHHHHHHHHTTTTTEEE CS
    GTP_EFTU  87 virglrvlDgavlvvdaveGvepqteevlrlalkegvpiivfiNKmDrlkaelkeiveevkqklsrk...............eeklekygekgekevpv 170
                 v+++lrv+Dga++vvd  eGv++qte+vlr+al e+++++v++NK+Dr+  el+ ++ee++q++ r+                +++++++    ++ +v
  EPX71901.1 115 VTAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIKPVVVVNKVDRALLELQISKEELYQNFARVvesvnvvistyydkvLGDCQVFP----DQGTV 209
                 ****************************************************************88866666666666655555555555....5567* PP

                 EEEBTTTTBTHH....................................................................................... CS
    GTP_EFTU 171 vfgSalkgegvk....................................................................................... 182
                 +f+S+l+g+g++                                                                                       
  EPX71901.1 210 AFASGLHGWGFTirqfadryakkfgidrnkmmtrlwgesyfnpktkkwskspvdadgnenqrafnmfildpiyrifdavmngrkdevfalltklevnlk 308
                 ***********999999999999**************************************************************************** PP

                 ........................HHHHHHHHHSHH CS
    GTP_EFTU 183 ........................tllealvellps 194
                                         +lle++v +lps
  EPX71901.1 309 pdekeldgkallkvvmrkflpaanALLEMIVLHLPS 344
                 *********999999999999999999999999986 PP

>> EFG_IV  Elongation factor G, domain IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       3.2   9.6e+03       1      13 [.     559     571 ..     559     580 .. 0.78
   2 !  104.6   0.0   9.1e-34   2.7e-30       2     120 ..     605     720 ..     604     721 .. 0.96

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 3.2
                 TCCESCEE.SS-C CS
      EFG_IV   1 pqVayrEtirkpv 13 
                 p V+yrE++ + +
  EPX71901.1 559 PVVSYRESVSETS 571
                 679***9988765 PP

  == domain 2  score: 104.6 bits;  conditional E-value: 9.1e-34
                 CCESCEE.SS-CCHCCCCCCCHTSSSHCCCCCEEEECCTTTTSSEEEEE--STCCCHCCCCHHHHCCCCCCTTS-TTTS--EESEEEEEEEEE--T..T CS
      EFG_IV   2 qVayrEtirkpvkereeklkkqsggdgqyakvileiePleegsgnefvdetkggqvpkeyieavekGfqealkeGplagepvtdvkvtLldgslhe..v 98 
                 +++ r    ++ k+r++++++++g+d  +a++i++++P++ ++ n +vd+tk +++++e++++v+++fq+a+keGpl++e+++ ++ ++ld++lh+  +
  EPX71901.1 605 KINPR----DDFKARARVMADEYGWDVSDARKIWCFGPET-TGANLVVDQTKAVSYLNEIKDSVVAAFQWATKEGPLFEENLRSCRYNILDVVLHAdaI 698
                 67777....899**************************76.********************************************************** PP

                 TC-HHHHHHHHCHHHHHHHHCC CS
      EFG_IV  99 dsseaafkpaarralkeallkA 120
                 ++++++++p+arr+++++ l A
  EPX71901.1 699 HRGGGQIIPTARRVVYASTLLA 720
                 *****************98877 PP

>> EFG_C  Elongation factor G C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.1   0.0   1.7e-22   5.2e-19       2      86 ..     724     809 ..     723     811 .. 0.97

  Alignments for each domain:
  == domain 1  score: 68.1 bits;  conditional E-value: 1.7e-22
                 EEEEEEEEEEEEECCCCCCHHHHHHHCT-EEEEEEEE..TTEEEEEEEEEGGG-TTHHHCHHHCTTTS-EEEEEEEEEEE--HHHH CS
       EFG_C   2 llEPivkveievpeeyvgkvisdlssrrGeiedmeqd.asgrviieaeiPlaeligfateLrslTkGegsfsmefsgYeevpgdkl 86 
                 + EP++ vei+v+e+ +g ++s l+++rG++   eq+ ++    i+a +P++e++gf  eLr++T G++  ++ f++++ + gd+ 
  EPX71901.1 724 IQEPVFLVEIQVSENAMGGIYSVLNKKRGQVFAEEQRvGTPLYNIKAYLPVNESFGFTGELRQATGGQAFPQLVFDHWSSMSGDPT 809
                 89***********************************99******************************************99975 PP

>> EFG_II  Elongation Factor G, domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.4   0.0   1.2e-16   3.6e-13       3      66 ..     486     548 ..     485     555 .. 0.94

  Alignments for each domain:
  == domain 1  score: 49.4 bits;  conditional E-value: 1.2e-16
      EFG_II   3 ePvislaiepkskadedklskaLarlleEDptlrverdeeTketilsGmGelHleivverlkre 66 
                  Pv+++a+e k+ +d  kl + L+rl++ Dp +  +++ e++e i++G GelHlei ++ l++ 
  EPX71901.1 486 SPVVQVAVEVKNGNDLPKLVEGLKRLSKSDPCVMCTTN-ESGEHIVAGAGELHLEICLNDLQES 548
                 59*******************************99887.8*******************99975 PP

>> GTP_EFTU_D2  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.5   0.0   5.7e-16   1.7e-12       2      74 .]     394     470 ..     393     470 .. 0.94

  Alignments for each domain:
  == domain 1  score: 47.5 bits;  conditional E-value: 5.7e-16
                  EEEEEEEEESEEETTEEEEEEC.TCTTSEE...EEEEEEEEEEETEEESEEETTSEEEEEEEESSCCSGSSTTCEEE CS
  GTP_EFTU_D2   2 tvalgrvysGtlkkGdevrilg.ndtskke...ivtrissletfhededeavaganaGvivaikgledaiivGdtlt 74 
                  ++a+grv+sGt++ G++vri g n+t++k+    +  i+++  +++ +  +++ ++aG+ ++++g+++ ++++ tlt
   EPX71901.1 394 FYAFGRVFSGTVRSGMKVRIQGpNYTPGKKedlFIKAIQRTVLMMGSKIDPIEDCPAGNVIGLVGIDQFLVKSGTLT 470
                  579**************************9***999999999999***********************888888885 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.1   2.2e-07   0.00065       7     114 .]      27     159 ..      21     159 .. 0.67

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 2.2e-07
                 STTSSHHHHHHHHHTS.TEEESSSTTSSSSEEEEEEEETTEE..................................EEEEECGGCSSHHHHHHHHHHHH CS
    MMR_HSR1   7 rpNvGKStLinaltge.kaivsdkpgtTrdinegrvklkgke..................................ielvDtpGliegaseekglgkaf 70 
                 +   GKStL  +l+++   i ++k+g  r + ++  + +  e                                  ++l+D pG ++       ++ ++
  EPX71901.1  27 HVDHGKSTLTDSLVQKaGIISAAKAGDARFMDTRADE-Q--ErgvtikstaislfaemsqddlkdvkeptthpdflVNLIDSPGHVD-------FSSEV 115
                 5678***********8334567778888888776433.1..12345666677888888888899999999999999********665.......66666 PP

                 HHHHC.TSEEEEEEETTTTCSHHHH.HHHHHHHHHTTSEEEEEEES CS
    MMR_HSR1  71 lalee.adlillvvdaseeklkpld.eeleelleeakkplilvlnk 114
                  a  + +d +l+vvd   e++  +    l + l e+ kp ++v+nk
  EPX71901.1 116 TAALRvTDGALVVVDTI-EGVCVQTeTVLRQALGERIKP-VVVVNK 159
                 6666647********54.434333303344444434444.666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (842 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       567  (0.0316247); expected 358.6 (0.02)
Passed bias filter:                      532  (0.0296726); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.76u 0.27s 00:00:01.03 Elapsed: 00:00:00.48
# Mc/sec: 5233.39
//
Query:       EPX71902.1  [L=108]
Description: 60S ribosomal protein L35a [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.4e-39  132.3   0.2    6.1e-39  132.1   0.2    1.0  1  Ribosomal_L35Ae  Ribosomal protein L35Ae
     0.0022   18.2   0.0        2.7    8.2   0.0    2.3  2  RimM             RimM N-terminal domain


Domain annotation for each model (and alignments):
>> Ribosomal_L35Ae  Ribosomal protein L35Ae
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.1   0.2   6.8e-43   6.1e-39       1      95 []       8     102 ..       8     102 .. 0.99

  Alignments for each domain:
  == domain 1  score: 132.1 bits;  conditional E-value: 6.8e-43
                      -EEEEEEEEEE--SSSSS-EEEEEEESS--SHHHHHCCTT-EE..EEE-......TTT-EEEEEEEEECTTTTEEEEEETT--SSS-TT-EEEE CS
  Ribosomal_L35Ae   1 LyvkavflgykrgkrnqrentaLlkiegvkskeeaefylGkrvayvykakkkkkgskvrviwGkvtrahGnsgvvrakFkknLppkaigarvrv 94 
                      Lyvka++l+++r+k+++++ t+++kieg++ske+a+fylGkrv+yvyk  k  +gsk+rviwG + rahGnsg+vra+F +nLp+k++g+++rv
       EPX71902.1   8 LYVKAKHLSHQRSKHHINPITSIVKIEGCDSKEDAQFYLGKRVCYVYKCAKPIRGSKLRVIWGTISRAHGNSGCVRARFVHNLPAKTFGSSLRV 101
                      8************************************************999****************************************** PP

                      . CS
  Ribosomal_L35Ae  95 m 95 
                      m
       EPX71902.1 102 M 102
                      9 PP

>> RimM  RimM N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0   0.00031       2.7      45      78 ..      15      50 ..       3      55 .. 0.77
   2 !    8.1   0.0   0.00035       3.1       2      26 ..      69      93 ..      68     105 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00031
                E-EEEEEEE..TTEEEEEETT--SHHHHHTTTT-EE CS
        RimM 45 ltvesvrvh..kkgvivklegvddrdaAealkgael 78
                l+ ++ ++h    + ivk+eg d+ ++A+ + g ++
  EPX71902.1 15 LSHQRSKHHinPITSIVKIEGCDSKEDAQFYLGKRV 50
                555566667634499**************9999887 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.00035
                EEEEEEEETTTTEEEEEE-SSSGGG CS
        RimM  2 vGkIvgahGlkGevkVkpftdfpea 26
                 G+I++ahG  G v+ +   + p++
  EPX71902.1 69 WGTISRAHGNSGCVRARFVHNLPAK 93
                59*************8876666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       258  (0.0143901); expected 358.6 (0.02)
Passed bias filter:                      221  (0.0123264); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.42
# Mc/sec: 773.44
//
Query:       EPX71903.1  [L=1506]
Description: C2 domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-45  154.0   3.6    3.1e-15   56.3   0.0    5.5  5  C2        C2 domain
  ------ inclusion threshold ------
       0.14   12.6   0.2          2    8.9   0.0    2.6  2  DUF4497   Protein of unknown function (DUF4497)


Domain annotation for each model (and alignments):
>> C2  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   2.7e-06     0.024       5      88 ..     577     658 ..     573     672 .. 0.77
   2 !   10.8   0.0     5e-05      0.45      46     101 ..     760     814 ..     712     816 .. 0.67
   3 !   53.5   0.1   2.5e-18   2.3e-14       3      95 ..     852     944 ..     850     952 .. 0.87
   4 !   56.3   0.0   3.4e-19   3.1e-15       2     101 ..    1163    1261 ..    1162    1263 .. 0.92
   5 !   14.5   0.0   3.6e-06     0.032      22      86 ..    1418    1480 ..    1395    1499 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 2.7e-06
                 EEEEEEESS.SSSSTTSSCEEEEEEEEECEEEEEE-SCSSSSSSEEEEEEEEEESCHTTSEEEEEEEEECSSSTEEEEEEEEEEG CS
          C2   5 vtvieAknL.pnkdkkgssdpyvkvsldgkqkakTrviknslnPvWnekftfevaeleeakLeveVfdndrlskddfiGkveipl 88 
                 v+v +A+     k  + ++++yv v  +g + +++ v  n++ P ++++++  v+   ++ Le+++fd ++   +   G++ i+ 
  EPX71903.1 577 VKVSSARRNeYFKSRTTKPSSYVAVVTNGREHGRSPVRGNTFTPNFDHTIYAVVSS-LNDPLELSLFDPES--PSLPFGTTYINT 658
                 555555555222333778999***************99******************.***********665..233456666555 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 5e-05
                 SSEEEEEEEEEESCHTTSEEEEEEEEECSSSTEEEEEEEEEEGHHHHTTHHHHEEE CS
          C2  46 nPvWnekftfevaeleeakLeveVfdndrlskddfiGkveiplstllsgeeaegwy 101
                  Pv   ++ + +++ e++k++++V  + + + d++iG + ipl++ll  e  + +y
  EPX71903.1 760 TPVSLSSMAY-IENRETSKIQITVVKKIKKEPDQVIGSTVIPLNKLLAAEGNQSTY 814
                 5555444555.555699*********99889999***********88777777666 PP

  == domain 3  score: 53.5 bits;  conditional E-value: 2.5e-18
                 EEEEEEEEESSSSSST.TSSCEEEEEEEEECEEEEEE-.SCSSSSSSEEEEEEEEEESCHTTSEEEEEEEEECSSSTEEEEEEEEEEGHHHHTTH CS
          C2   3 levtvieAknLpnkdk.kgssdpyvkvsldgkqkakTr.viknslnPvWnekftfevaeleeakLeveVfdndrlskddfiGkveiplstllsge 95 
                 ++++ i+A+n    d   ++ dpyv+v ++g+++ +T  v +ns nPvWne ++ +v    ++++e+eV+d++  ++d+ +G v++p++++++ +
  EPX71903.1 852 MRISTIKANNCSSTDLgLKKNDPYVRVLVNGSVVERTVhVLNNS-NPVWNEVLYAPVLA-DTEVIELEVMDHEDSGHDKSLGYVKVPVKSFKNAA 944
                 6899999****9998877789****************9555777.***********999.9**********99989999*********9965544 PP

  == domain 4  score: 56.3 bits;  conditional E-value: 3.4e-19
                  EEEEEEEEEESSSSSSTTSSCEEEEEEEEECEEEEEE-SCSSSSSSEEEEEEEEEESCHTTSEEEEEEEEECSSSTEEEEEEEEEEGHHHHTTHHHH CS
          C2    2 klevtvieAknLpnkdkkgssdpyvkvsldgkqkakTrviknslnPvWnekftfevaeleeakLeveVfdndrlskddfiGkveiplstllsgeeae 98  
                   l+++ +++k+Lp  d+  ssdp+v+++ ++k+++k++vik++lnPvW+e+  + +++ + ++ ++ ++d+d+ +  d++G   i+l  l+ + + +
  EPX71903.1 1163 LLHFNLYNGKDLPIGDIR-SSDPFVSLKTNDKEVYKSKVIKKNLNPVWDEETDIVIQNRALDVFKLVCYDWDMGEAADVLGSHLIDLLALEPNVQSQ 1258
                  689999*********995.9*****************************************************99***********99977777766 PP

                  EEE CS
          C2   99 gwy 101 
                  + +
  EPX71903.1 1259 HEL 1261
                  655 PP

  == domain 5  score: 14.5 bits;  conditional E-value: 3.6e-06
                  CEEEEEEEE..ECEEEEEE-SCSSSSSSEEEEEEEEEESCHTTSEEEEEEEEECSSSTEEEEEEEEE CS
          C2   22 sdpyvkvsl..dgkqkakTrviknslnPvWnekftfevaeleeakLeveVfdndrlskddfiGkvei 86  
                  ++  vkv +  ++ + +kT+ ++   +P+Wne++ +  ++   ++L+v++  ++   +++  G++++
  EPX71903.1 1418 PQKLVKVVItdKQGRSYKTKSHRGP-SPKWNEHIPVRFNP--GDSLHVSLIISNL-IGHSKFGEATF 1480
                  56678999988999999***55555.9*******998887..9999999988887.44444666655 PP

>> DUF4497  Protein of unknown function (DUF4497)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.0   0.00022         2      24      57 ..     774     807 ..     763     832 .. 0.77
   2 ?    0.2   0.0      0.12     1e+03      28      83 ..     914     969 ..     909     984 .. 0.68

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00022
     DUF4497  24 kkfpleisvlkkgeepkkkliGsaeislselfnk 57 
                 + ++++i+v+kk +++  ++iGs+ i+l++l++ 
  EPX71903.1 774 ETSKIQITVVKKIKKEPDQVIGSTVIPLNKLLAA 807
                 67899*******55566666*********99876 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.12
     DUF4497  28 leisvlkkgeepkkkliGsaeislselfnklikevkekkknepvsktikgtfpLkd 83 
                 +e++v++ ++ ++ k +G +++++++  n   k  k+++ n +        ++L +
  EPX71903.1 914 IELEVMDHEDSGHDKSLGYVKVPVKSFKNAANKIGKTEMANRIFGTDEVEALKLVS 969
                 68999999999************998766666666666666655444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1506 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       510  (0.0284455); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.84u 0.30s 00:00:01.13 Elapsed: 00:00:00.49
# Mc/sec: 9329.47
//
Query:       EPX71904.1  [L=928]
Description: survivin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-41  140.3   5.8    1.3e-20   73.8   0.2    2.8  2  BIR       Inhibitor of Apoptosis domain


Domain annotation for each model (and alignments):
>> BIR  Inhibitor of Apoptosis domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.8   0.2   7.4e-25   1.3e-20       1      72 [.      25      96 ..      25      97 .. 0.94
   2 !   68.1   1.2   4.4e-23   7.9e-19       1      72 [.     118     191 ..     118     192 .. 0.89

  Alignments for each domain:
  == domain 1  score: 73.8 bits;  conditional E-value: 7.4e-25
         BIR  1 RlatFkk.nWpeskkeakpsaeeLaeaGFyytpts...eskdnvqCfyCklaldgweedDdpleeHkkhspkCefl 72
                Rl+tFkk  W  s+    ps+e+L++ GFyy+p++   ++ dnv+Cf+C++++ +wee+Ddpl+eH +hsp+C+++
  EPX71904.1 25 RLETFKKiSWSLSS----PSPEQLSAVGFYYNPIQkpqQRIDNVTCFMCSKSFYDWEENDDPLKEHITHSPSCPWA 96
                9****9988*9765....999*************9887889*********************************97 PP

  == domain 2  score: 68.1 bits;  conditional E-value: 4.4e-23
         BIR   1 RlatFkk.nWp.eskkeakpsaeeLaeaGFyytptseskdnvqCfyCklaldgweedDdpleeHkkhspkCefl 72 
                 R  tF +  Wp  ++++ +++++++a+aGF++tp+ +skd ++C yC+  l++we dDdp++eH++++p+C f+
  EPX71904.1 118 RELTFVDkVWPyINRSDFHCQPNTMATAGFVFTPSIDSKDAAHCLYCNIDLHDWESDDDPYKEHQRRRPNCLFF 191
                 566997757**544555679999*************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (928 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       899  (0.0501422); expected 358.6 (0.02)
Passed bias filter:                      312  (0.017402); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.72u 0.29s 00:00:01.01 Elapsed: 00:00:00.48
# Mc/sec: 5867.09
//
Query:       EPX71905.1  [L=542]
Description: karyopherin Cut15 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.1e-91  295.6  16.3    4.3e-13   48.8   0.1    9.0  9  Arm           Armadillo/beta-catenin-like repeat
    1.5e-24   86.2   6.4    2.9e-24   85.3   6.4    1.5  1  IBB           Importin beta binding domain
    5.5e-20   70.7   0.3    2.7e-18   65.3   1.6    2.7  3  Arm_3         Atypical Arm repeat
    4.2e-19   68.6   0.7    4.9e-08   33.3   0.0    6.2  6  HEAT_EZ       HEAT-like repeat
    7.2e-17   61.6   0.0    1.8e-05   25.0   0.0    5.4  5  HEAT_2        HEAT repeats
    1.8e-15   55.7   0.0    0.00017   21.6   0.0    6.0  6  HEAT          HEAT repeat
    1.7e-06   28.1   0.0       0.37   10.9   0.0    5.0  6  V-ATPase_H_C  V-ATPase subunit H
    7.3e-06   26.1   0.1        1.4    9.2   0.0    5.2  5  CTNNBL        Catenin-beta-like, Arm-motif containing nuclear
    5.9e-05   22.7   0.1        1.1    8.7   0.1    4.0  4  Arm_2         Armadillo-like
    0.00012   22.2   0.6       0.72   10.1   0.0    4.4  5  RICTOR_V      Rapamycin-insensitive companion of mTOR, domain
     0.0042   16.7   0.0         21    4.6   0.0    4.1  5  NopRA1        Nucleolar pre-ribosomal-associated protein 1
  ------ inclusion threshold ------
      0.036   14.7   0.0        1.8    9.4   0.0    3.6  2  HEAT_PBS      PBS lyase HEAT-like repeat
      0.043   13.2   6.9      0.075   12.4   6.9    1.3  1  DUF3552       Domain of unknown function (DUF3552)
      0.059   11.6   0.0         26    2.9   0.0    3.4  3  SEN1_N        SEN1 N terminal
        4.1    7.1   6.2        5.5    6.7   6.2    1.1  1  NUSAP         Nucleolar and spindle-associated protein


Domain annotation for each model (and alignments):
>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.76     9e+02      18      33 ..      85     100 ..      84     101 .. 0.89
   2 !   34.2   0.0   1.4e-11   1.7e-08       2      41 .]     112     151 ..     111     151 .. 0.96
   3 !   48.1   0.0   5.9e-16   7.1e-13       1      40 [.     153     192 ..     153     193 .. 0.97
   4 !   37.7   0.1   1.1e-12   1.3e-09       1      41 []     195     236 ..     195     236 .. 0.96
   5 !   24.3   0.0   1.9e-08   2.3e-05       9      41 .]     247     278 ..     239     278 .. 0.91
   6 !   29.5   0.0   4.4e-10   5.2e-07       2      40 ..     281     319 ..     280     320 .. 0.95
   7 !   46.3   0.2   2.2e-15   2.7e-12       2      41 .]     323     362 ..     322     362 .. 0.95
   8 !   48.8   0.1   3.6e-16   4.3e-13       3      40 ..     366     403 ..     364     404 .. 0.94
   9 !   29.3   0.2     5e-10     6e-07       4      40 ..     412     448 ..     408     449 .. 0.93

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.76
                 HHHTTTSSHHHHHHHH CS
         Arm  18 vrLLssedeevqeeAa 33 
                 vr L+++d e+q +A+
  EPX71905.1  85 VRALYTDDIEIQIQAT 100
                 78899*********98 PP

  == domain 2  score: 34.2 bits;  conditional E-value: 1.4e-11
                 HHHHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHTT CS
         Arm   2 senkdavieaGavppLvrLLssedeevqeeAawALsNLaa 41 
                 +++++ vi+ G+vp++v++L +e+  +++eA wAL+N+a+
  EPX71905.1 112 DPPIQKVINTGVVPRFVEFLGHENNLLKFEASWALTNIAS 151
                 799***********************************96 PP

  == domain 3  score: 48.1 bits;  conditional E-value: 5.9e-16
                 SHHHHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm   1 nsenkdavieaGavppLvrLLssedeevqeeAawALsNLa 40 
                 +s+++ +v+++Gavp++v+LL+s+  +v+e+A+wAL+N+a
  EPX71905.1 153 SSDQTHTVVNSGAVPIFVSLLTSPEKDVREQAVWALGNIA 192
                 689************************************8 PP

  == domain 4  score: 37.7 bits;  conditional E-value: 1.1e-12
                 SHHHHHHHHHTTHHHHHHHHTT.TSSHHHHHHHHHHHHHHTT CS
         Arm   1 nsenkdavieaGavppLvrLLs.sedeevqeeAawALsNLaa 41 
                 ++ ++d+v ++G+++pL++ +  ++  +++++++w+LsN+++
  EPX71905.1 195 SPMCRDHVLQCGVLEPLLTVIGsCKRLSMLRNCTWTLSNMCR 236
                 5779*************************************7 PP

  == domain 5  score: 24.3 bits;  conditional E-value: 1.9e-08
                 HHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHTT CS
         Arm   9 ieaGavppLvrLLssedeevqeeAawALsNLaa 41 
                 i++ ++p+L +L++s d++v  +A+wA+s+L++
  EPX71905.1 247 ISC-VIPVLSKLIYSLDDDVIVDALWAISYLSD 278
                 556.9**************************95 PP

  == domain 6  score: 29.5 bits;  conditional E-value: 4.4e-10
                 HHHHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm   2 senkdavieaGavppLvrLLssedeevqeeAawALsNLa 40 
                 +e ++ +i+aG+ ++Lv+LL ++++++q++A++ ++N+ 
  EPX71905.1 281 NEKIQSIIDAGIPRRLVELLMHPNPQIQTPALRSVGNIV 319
                 789**********************************96 PP

  == domain 7  score: 46.3 bits;  conditional E-value: 2.2e-15
                 HHHHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHTT CS
         Arm   2 senkdavieaGavppLvrLLssedeevqeeAawALsNLaa 41 
                 + +++++i++Ga+ +L++LLs++ +++++eA+w++sN++a
  EPX71905.1 323 DLQTQVIINCGALSALLSLLSHPRDGIRKEACWTISNITA 362
                 5699**********************************96 PP

  == domain 8  score: 48.8 bits;  conditional E-value: 3.6e-16
                 HHHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm   3 enkdavieaGavppLvrLLssedeevqeeAawALsNLa 40 
                  ++++viea+++ppL++LL + d ++q+eA+wA+sN +
  EPX71905.1 366 SQIQYVIEANIIPPLINLLATADFKIQKEACWAVSNAT 403
                 69**********************************76 PP

  == domain 9  score: 29.3 bits;  conditional E-value: 5e-10
                 HHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm   4 nkdavieaGavppLvrLLssedeevqeeAawALsNLa 40 
                 ++++++++Ga++pL++LL ++d ++ ++A+  + N+ 
  EPX71905.1 412 QIRYIVSQGAIKPLCNLLACQDNKIIQVALDGIENIL 448
                 99*********************************96 PP

>> IBB  Importin beta binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.3   6.4   2.4e-27   2.9e-24       1      90 []      12     101 ..      12     101 .. 0.87

  Alignments for each domain:
  == domain 1  score: 85.3 bits;  conditional E-value: 2.4e-27
                 XXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..............XXXXXXXXXXXX-----TT--------HHHHH CS
         IBB   1 RlksfKnkgk.daeelRrrReeeqvelRKqkreeqllKrRnvaaeaaaeeeadseeee...eessaeekkleeleemvqgvnSddpelqleatq 90 
                 R++++K kg  +a+elRrrRe++q+e+RKqkree+l+KrRn+a  +++++e+     +   +e++++++++ +l++mv++++ dd+e q++at+
  EPX71905.1  12 RKQNYKGKGAfQADELRRRRETQQIEIRKQKREENLNKRRNLADVSEEPSEEV----TpviNEKENDSELDLQLPDMVRALYTDDIEIQIQATT 101
                 89****************************************44333333333....24567789999************************97 PP

>> Arm_3  Atypical Arm repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       3.5   4.2e+03      18      31 ..     298     311 ..     293     313 .. 0.78
   2 ?    0.3   0.0      0.44   5.2e+02       5      31 ..     327     353 ..     325     357 .. 0.86
   3 !   65.3   1.6   2.3e-21   2.7e-18       2      49 ..     464     509 ..     463     513 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 3.5
       Arm_3  18 aLQnheneeIYkkA 31 
                 +L +h n +I   A
  EPX71905.1 298 ELLMHPNPQIQTPA 311
                 7999*****97655 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.44
       Arm_3   5 lliEeagGldkIeaLQnheneeIYkkA 31 
                 ++i  +g+l  +  L +h  + I k A
  EPX71905.1 327 QVIINCGALSALLSLLSHPRDGIRKEA 353
                 67889*************999887766 PP

  == domain 3  score: 65.3 bits;  conditional E-value: 2.3e-21
       Arm_3   2 pyalliEeagGldkIeaLQnheneeIYkkAlkIiekYFseeeeeddee 49 
                   a +iE+agG+d I +LQn+ n eIY+kA++Iie+YF+ee +   e 
  EPX71905.1 464 LHAVYIEDAGGMDLIYELQNSANAEIYQKAYNIIERYFGEE-D-VVED 509
                 5689*************************************.4.3333 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       4.3   5.1e+03      18      42 ..      73      92 ..      70     100 .. 0.70
   2 !   33.3   0.0   4.1e-11   4.9e-08       3      55 .]     138     191 ..     136     191 .. 0.92
   3 ?   -0.6   0.0       1.8   2.1e+03      45      55 .]     224     234 ..     199     243 .. 0.66
   4 ?    6.4   0.0     0.011        13       7      55 .]     269     318 ..     263     318 .. 0.74
   5 !   13.5   0.0   6.4e-05     0.076      30      55 .]     335     360 ..     333     360 .. 0.94
   6 !   17.0   0.0   5.1e-06    0.0061       3      54 ..     349     401 ..     349     402 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 4.3
     HEAT_EZ 18 epellqplvpeilpaLlalLnddsd 42
                ++  l +++p++++aL       +d
  EPX71905.1 73 NDSELDLQLPDMVRALY-----TDD 92
                66778889999999987.....555 PP

  == domain 2  score: 33.3 bits;  conditional E-value: 4.1e-11
     HEAT_EZ   3 vRraAawaLGrlaggepellqp.lvpeilpaLlalLnddsdeVRaaAagaLgnl 55 
                 +++ A waL ++a+g +++ ++ + + ++p +++lL++++++VR++A++aLgn+
  EPX71905.1 138 LKFEASWALTNIASGSSDQTHTvVNSGAVPIFVSLLTSPEKDVREQAVWALGNI 191
                 6799*****99********99955578*************************98 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 1.8
     HEAT_EZ  45 RaaAagaLgnl 55 
                   ++ ++L+n+
  EPX71905.1 224 LRNCTWTLSNM 234
                 66777777775 PP

  == domain 4  score: 6.4 bits;  conditional E-value: 0.011
     HEAT_EZ   7 AawaLGrlaggepellqp.lvpeilpaLlalLnddsdeVRaaAagaLgnl 55 
                 A+wa++ l  g  e +q      i + L+ lL+++++ +++ A++  gn+
  EPX71905.1 269 ALWAISYLSDGPNEKIQSiIDAGIPRRLVELLMHPNPQIQTPALRSVGNI 318
                 78888774444444444415556777899**********99999998886 PP

  == domain 5  score: 13.5 bits;  conditional E-value: 6.4e-05
     HEAT_EZ  30 lpaLlalLnddsdeVRaaAagaLgnl 55 
                 l aLl+lL+++ d +R+ A+++++n+
  EPX71905.1 335 LSALLSLLSHPRDGIRKEACWTISNI 360
                 789*********************97 PP

  == domain 6  score: 17.0 bits;  conditional E-value: 5.1e-06
     HEAT_EZ   3 vRraAawaLGr.laggepellqplvpeilpaLlalLnddsdeVRaaAagaLgn 54 
                 +R  A+w++++  ag++++ +      i+p+L++lL + + ++++ A++a +n
  EPX71905.1 349 IRKEACWTISNiTAGNASQIQYVIEANIIPPLINLLATADFKIQKEACWAVSN 401
                 5999*******6666666666669************87555*********987 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0     0.015        18      29      60 ..     120     151 ..     105     163 .. 0.85
   2 !   25.0   0.0   1.5e-08   1.8e-05       2      60 ..     125     193 ..     124     212 .. 0.84
   3 !   17.3   0.0     4e-06    0.0047       4      64 ..     296     368 ..     292     374 .. 0.78
   4 !   21.9   0.0   1.4e-07   0.00017       2      72 ..     336     430 ..     335     445 .. 0.71
   5 ?    0.9   0.0      0.52   6.2e+02       4      37 ..     477     511 ..     475     514 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.015
      HEAT_2  29 npealpaLvellededpavRraaaeaLgaigd 60 
                 n+ ++p +ve+l +e+     +a +aL  i++
  EPX71905.1 120 NTGVVPRFVEFLGHENNLLKFEASWALTNIAS 151
                 66899**********************99864 PP

  == domain 2  score: 25.0 bits;  conditional E-value: 1.5e-08
      HEAT_2   2 daLlqalendpdpevrraairaLgrignp...........ealpaLvellededpavRraaaeaLgaigd 60 
                 + ++++l  +++  ++ +a +aL +i++             a+p++v+ll++++ +vR++a++aLg i+ 
  EPX71905.1 125 PRFVEFL-GHENNLLKFEASWALTNIASGssdqthtvvnsGAVPIFVSLLTSPEKDVREQAVWALGNIAG 193
                 6688999.9***************777665556666666688************************9964 PP

  == domain 3  score: 17.3 bits;  conditional E-value: 4e-06
      HEAT_2   4 LlqalendpdpevrraairaLg......rignp........ealpaLvellededpavRraaaeaLgai..gdpeal 64 
                 L+++l  +p+p+++  a+r+ g      +             al aL++ll+++   +R++a+++++ i  g+ + +
  EPX71905.1 296 LVELL-MHPNPQIQTPALRSVGnivtgdD---LqtqviincGALSALLSLLSHPRDGIRKEACWTISNItaGNASQI 368
                 78888.8***************5544443...15558888899***********************99944445555 PP

  == domain 4  score: 21.9 bits;  conditional E-value: 1.4e-07
      HEAT_2   2 daLlqalendpdpevrraairaLg..rignp.........ealpaLvellededpavRraaaeaLg...........aig...dpealpaLkelld 72 
                 +aLl++l ++p + +r++a++++   + gn           ++p L++ll ++d  ++++a++a +           +i+   ++ a++ L+ ll+
  EPX71905.1 336 SALLSLL-SHPRDGIRKEACWTISniTAGNAsqiqyvieaNIIPPLINLLATADFKIQKEACWAVSnatsgginqptQIRyivSQGAIKPLCNLLA 430
                 789**9*.9***************663344445666665577***********************7333333333333335556778888888775 PP

  == domain 5  score: 0.9 bits;  conditional E-value: 0.52
      HEAT_2   4 LlqalendpdpevrraairaLgr.ignpealpaLv 37 
                 L+  l+n+++ e+ ++a   + r +g++++++ L 
  EPX71905.1 477 LIYELQNSANAEIYQKAYNIIERyFGEEDVVEDLE 511
                 78899*****************6379999999885 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0     0.011        13       1      30 [.     123     152 ..     123     153 .. 0.94
   2 !   21.6   0.0   1.4e-07   0.00017       2      28 ..     166     192 ..     165     194 .. 0.96
   3 ?   -2.5   0.0       7.7   9.2e+03      19      29 ..     226     236 ..     225     237 .. 0.84
   4 !    6.9   0.0    0.0075         9       5      29 ..     296     320 ..     292     321 .. 0.90
   5 !   10.7   0.0   0.00044      0.53       2      28 ..     335     361 ..     334     363 .. 0.92
   6 ?    2.0   0.0      0.27   3.3e+02       1      26 [.     376     401 ..     376     405 .. 0.88

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.011
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalaev 30 
                 ++P +++ l +++      A +aL+++a++
  EPX71905.1 123 VVPRFVEFLGHENNLLKFEASWALTNIASG 152
                 589*************************97 PP

  == domain 2  score: 21.6 bits;  conditional E-value: 1.4e-07
                 HHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgala 28 
                 +P++++ll++p+ +VRe A++aLg++a
  EPX71905.1 166 VPIFVSLLTSPEKDVREQAVWALGNIA 192
                 79***********************98 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 7.7
                 HHHHHHHHHHH CS
        HEAT  19 aAakaLgalae 29 
                 ++ ++L ++++
  EPX71905.1 226 NCTWTLSNMCR 236
                 7999****997 PP

  == domain 4  score: 6.9 bits;  conditional E-value: 0.0075
                 HHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAakaLgalae 29 
                 l++ll++p+p++   A++++g+++ 
  EPX71905.1 296 LVELLMHPNPQIQTPALRSVGNIVT 320
                 99********************985 PP

  == domain 5  score: 10.7 bits;  conditional E-value: 0.00044
                 HHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgala 28 
                 l +ll+lls+p   +R+ A++++ ++ 
  EPX71905.1 335 LSALLSLLSHPRDGIRKEACWTISNIT 361
                 6789********************996 PP

  == domain 6  score: 2.0 bits;  conditional E-value: 0.27
                 HHHHHHHHHT-SSHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLga 26 
                 ++P+l++ll   + ++ + A++a+ +
  EPX71905.1 376 IIPPLINLLATADFKIQKEACWAVSN 401
                 79*******99999999999999875 PP

>> V-ATPase_H_C  V-ATPase subunit H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       1.3   1.5e+03      78     108 ..     116     145 ..      83     153 .. 0.68
   2 ?    0.4   0.0      0.55   6.6e+02      85     111 ..     164     190 ..     145     194 .. 0.76
   3 !    9.9   0.0   0.00064      0.77      47     113 ..     254     319 ..     242     322 .. 0.82
   4 !   10.9   0.0   0.00031      0.37      43     112 ..     292     360 ..     281     364 .. 0.86
   5 ?    2.0   0.0      0.18   2.2e+02      85     112 ..     333     360 ..     324     404 .. 0.55
   6 !    7.0   0.0     0.005         6      43     111 ..     421     499 ..     417     504 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 1.3
  V-ATPase_H_C  78 kkvleklkaKekimellehedeevkyeALka 108
                   +kv+ ++++  + +e+l he++ +k+eA  a
    EPX71905.1 116 QKVI-NTGVVPRFVEFLGHENNLLKFEASWA 145
                   3333.34566677788888888888888555 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.55
  V-ATPase_H_C  85 kaKekimellehedeevkyeALkavqk 111
                   +a    ++ll++++++v+ +A  a+ +
    EPX71905.1 164 GAVPIFVSLLTSPEKDVREQAVWALGN 190
                   555567899************998865 PP

  == domain 3  score: 9.9 bits;  conditional E-value: 0.00064
  V-ATPase_H_C  47 LiklleeskdktvlavalnDigelvkllpegkkvleklkaKekimellehedeevkyeALkavqkll 113
                   L kl++ s d+ v++ al  i+ l +  +e+ + + + ++  +++ell h++++++  AL++v +++
    EPX71905.1 254 LSKLIY-SLDDDVIVDALWAISYLSDGPNEKIQSIIDAGIPRRLVELLMHPNPQIQTPALRSVGNIV 319
                   555553.5566777888888888888888899999999*************************9987 PP

  == domain 4  score: 10.9 bits;  conditional E-value: 0.00031
  V-ATPase_H_C  43 llkkLiklleeskdktvlavalnDigelvkllpegkkvleklkaKekimellehedeevkyeALkavqkl 112
                   + ++L++ll  + ++++++ al  +g++v+  + + +v+ + +a + +++ll+h+ + +++eA  +++++
    EPX71905.1 292 IPRRLVELL-MHPNPQIQTPALRSVGNIVTGDDLQTQVIINCGALSALLSLLSHPRDGIRKEACWTISNI 360
                   668999999.578899999999999999999999999999999999999999999999999999998876 PP

  == domain 5  score: 2.0 bits;  conditional E-value: 0.18
  V-ATPase_H_C  85 kaKekimellehedeevkyeALkavqkl 112
                   +a + +++ll+h+ + +++eA  +++++
    EPX71905.1 333 GALSALLSLLSHPRDGIRKEACWTISNI 360
                   4445555555555555555555555443 PP

  == domain 6  score: 7.0 bits;  conditional E-value: 0.005
  V-ATPase_H_C  43 llkkLiklleeskdktvlavalnDigelvkl.......lpegkkvl.......eklkaKekimellehedeevkyeALkavqk 111
                    +k L++ll + +d+++++val  i++++++        p+    +       e+ ++ + i el +++++e+ ++A + +++
    EPX71905.1 421 AIKPLCNLL-ACQDNKIIQVALDGIENILRVgdldraeNPDN---InlhavyiEDAGGMDLIYELQNSANAEIYQKAYNIIER 499
                   6899*****.689999**********9999855444332222...12334455999999999999999999999999777665 PP

>> CTNNBL  Catenin-beta-like, Arm-motif containing nuclear
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0     0.016        20      56      97 ..      94     136 ..      89     143 .. 0.84
   2 ?    1.5   0.0      0.28   3.4e+02      72     104 .]     153     185 ..     145     185 .. 0.83
   3 !    9.2   0.0    0.0011       1.4      62     101 ..     269     309 ..     264     312 .. 0.88
   4 ?    2.5   0.0      0.14   1.6e+02      77     100 ..     327     350 ..     310     354 .. 0.80
   5 ?   -1.1   0.0       1.7   2.1e+03      72      98 ..     409     435 ..     407     441 .. 0.75

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.016
      CTNNBL  56 EadLdeeikelsvlaeapel.YpelvelgavesLvgLlsHeNt 97 
                 E++++++ k  +vl+++ +   ++++++g+v ++v+ l HeN 
  EPX71905.1  94 EIQIQATTKFRKVLSKEHDPpIQKVINTGVVPRFVEFLGHENN 136
                 677777777778999888888999******************7 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.28
      CTNNBL  72 apelYpelvelgavesLvgLlsHeNtDiaiavv 104
                  +++ +++v++gav  +v+Ll+ +  D++ ++v
  EPX71905.1 153 SSDQTHTVVNSGAVPIFVSLLTSPEKDVREQAV 185
                 55667899*******************998876 PP

  == domain 3  score: 9.2 bits;  conditional E-value: 0.0011
      CTNNBL  62 eikelsvlaeapel.YpelvelgavesLvgLlsHeNtDiai 101
                 ++ ++s l+  p+   +++++ g+ ++Lv+Ll H+N  i++
  EPX71905.1 269 ALWAISYLSDGPNEkIQSIIDAGIPRRLVELLMHPNPQIQT 309
                 5677899999999889********************99976 PP

  == domain 4  score: 2.5 bits;  conditional E-value: 0.14
      CTNNBL  77 pelvelgavesLvgLlsHeNtDia 100
                 +++++ ga++ L++LlsH+   i+
  EPX71905.1 327 QVIINCGALSALLSLLSHPRDGIR 350
                 5678999***********876665 PP

  == domain 5  score: -1.1 bits;  conditional E-value: 1.7
      CTNNBL  72 apelYpelvelgavesLvgLlsHeNtD 98 
                 +p++   +v++ga++ L++Ll+ +   
  EPX71905.1 409 QPTQIRYIVSQGAIKPLCNLLACQDNK 435
                 6778888999***********754433 PP

>> Arm_2  Armadillo-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0     0.032        38      48      81 ..     158     191 ..     132     204 .. 0.80
   2 !    5.5   0.0    0.0084        10      55     144 ..     250     343 ..     195     344 .. 0.73
   3 !    8.7   0.1   0.00088       1.1       8      97 ..     329     419 ..     323     440 .. 0.76
   4 ?    2.7   0.0     0.059        70      50      79 ..     469     498 ..     461     511 .. 0.90

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.032
       Arm_2  48 diirdlggitiianllsksnaevkekalnalnnl 81 
                  ++ + g ++i  +ll ++++ v+e+a+ al n 
  EPX71905.1 158 HTVVNSGAVPIFVSLLTSPEKDVREQAVWALGNI 191
                 46778899*********************99886 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.0084
       Arm_2  55 gitiianllsksnaevkekalnalnnlsenven..qkkikvyvnqvckdivssplNsevQlagLklltnlsvtneyqhllv.s..yisellsLLs 144
                 +i+++ +l+ + +  v + al a+  ls++ ++  q+ i++ +++ + + ++ p N ++Q  +L+ ++n+ + ++ q  ++ +   +s llsLLs
  EPX71905.1 250 VIPVLSKLIYSLDDDVIVDALWAISYLSDGPNEkiQSIIDAGIPRRLVELLMHP-NPQIQTPALRSVGNIVTGDDLQTQVIiNcgALSALLSLLS 343
                 78999999999999999********99997766225568888999999988877.99************99999887544313225777777776 PP

  == domain 3  score: 8.7 bits;  conditional E-value: 0.00088
       Arm_2   8 vLepkelekllalLkssedpliqeialltlgn.saaysvnqdiirdlggitiianllsksnaevkekalnalnnl.senvenqkkikvyvnq 97 
                 +++   l+ ll+lL   +d + +e+   t++n  a  +   + + +  +i+ + nll + + ++++ a  a+ n  s + ++ ++i+  v+q
  EPX71905.1 329 IINCGALSALLSLLSHPRDGIRKEA-CWTISNiTAGNASQIQYVIEANIIPPLINLLATADFKIQKEACWAVSNAtSGGINQPTQIRYIVSQ 419
                 577788999**********876665.55555505555555589999*********************9999866516666777888887776 PP

  == domain 4  score: 2.7 bits;  conditional E-value: 0.059
       Arm_2  50 irdlggitiianllsksnaevkekalnaln 79 
                 i+d gg+ +i +l ++ nae+++ka n+++
  EPX71905.1 469 IEDAGGMDLIYELQNSANAEIYQKAYNIIE 498
                 99***********************99987 PP

>> RICTOR_V  Rapamycin-insensitive companion of mTOR, domain 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.59     7e+02       8      36 ..     144     173 ..     141     178 .. 0.70
   2 !   10.1   0.0    0.0006      0.72       5      57 ..     183     236 ..     179     240 .. 0.85
   3 ?   -0.2   0.0         1   1.2e+03       6      36 ..     269     300 ..     268     320 .. 0.72
   4 ?    4.8   0.1     0.028        33       4      38 ..     351     386 ..     349     396 .. 0.85
   5 ?   -2.7   0.0       6.1   7.3e+03       4      15 ..     393     404 ..     391     426 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.59
    RICTOR_V   8 WaiGhigsselGie.lldeydivedivela 36 
                 Wa+ +i+s  +  +  + ++ +v+ +v+l 
  EPX71905.1 144 WALTNIASGSSDQThTVVNSGAVPIFVSLL 173
                 ******996554444666667777777765 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.0006
    RICTOR_V   5 aaLWaiGhigs.selGielldeydivedivelaeespvlslRGtafyvLgliss 57 
                 +a Wa+G+i+  s++    + ++ ++e ++ ++ +++ ls+   + + L+ +++
  EPX71905.1 183 QAVWALGNIAGdSPMCRDHVLQCGVLEPLLTVIGSCKRLSMLRNCTWTLSNMCR 236
                 799******87366666677778******************9999999988776 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 1
    RICTOR_V   6 aLWaiGhigsse.lGie.lldeydivedivela 36 
                 aLWai +    + + i+ ++d   i  ++vel 
  EPX71905.1 269 ALWAISYLSDGPnEKIQsIIDA-GIPRRLVELL 300
                 89***99988541567744444.8888888776 PP

  == domain 4  score: 4.8 bits;  conditional E-value: 0.028
    RICTOR_V   4 KaaLWaiGhigs.selGielldeydivedivelaee 38 
                 K a W+i +i +   + i+++ e +i++ +++l  +
  EPX71905.1 351 KEACWTISNITAgNASQIQYVIEANIIPPLINLLAT 386
                 8999******99456789999999****99998765 PP

  == domain 5  score: -2.7 bits;  conditional E-value: 6.1
    RICTOR_V   4 KaaLWaiGhigs 15 
                 K a Wa+ +  s
  EPX71905.1 393 KEACWAVSNATS 404
                 889999999766 PP

>> NopRA1  Nucleolar pre-ribosomal-associated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.12   1.5e+02     103     143 ..     119     156 ..     115     161 .. 0.88
   2 ?    4.6   0.0     0.018        21     102     137 ..     160     192 ..     156     247 .. 0.82
   3 ?    4.4   0.0     0.021        25     108     200 ..     251     336 ..     239     336 .. 0.84
   4 ?   -4.0   0.0       7.5     9e+03       8      24 ..     342     358 ..     338     363 .. 0.49
   5 ?   -0.6   0.0      0.68   8.1e+02     104     180 ..     373     445 ..     368     454 .. 0.75

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.12
      NopRA1 103 ldlndvPlfysllyssseedeeykkersWiLrlladGlrtk 143
                 +++  vP f ++l ++++     k e sW L+ +a G  ++
  EPX71905.1 119 INTGVVPRFVEFLGHENNL---LKFEASWALTNIASGSSDQ 156
                 678889************9...************9997765 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.018
      NopRA1 102 eldlndvPlfysllyssseedeeykkersWiLrlla 137
                  +++  vP f sll+s +++   ++++  W L  +a
  EPX71905.1 160 VVNSGAVPIFVSLLTSPEKD---VREQAVWALGNIA 192
                 5788899************9...9999999997765 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.021
      NopRA1 108 vPlfysllyssseedeeykkersWiLrlladGlrtksDlkllkrrrvfelllslynsplldaklrelilelllratrieggattLitrsGlls 200
                 +P +++l+ys +++   +     W + +l dG ++k    ++   ++  +l+ l +    ++++++  l+ + ++++ ++  t+ i ++G ls
  EPX71905.1 251 IPVLSKLIYSLDDD---VIVDALWAISYLSDGPNEKIQ-SIIDA-GIPRRLVELLMH--PNPQIQTPALRSVGNIVTGDDLQTQVIINCGALS 336
                 899***********...***************987755.45544.588888888887..6888888889999888888888888888888886 PP

  == domain 4  score: -4.0 bits;  conditional E-value: 7.5
      NopRA1   8 LssedeeirrlAlavls 24 
                 Ls  ++ ir+ A  ++s
  EPX71905.1 342 LSHPRDGIRKEACWTIS 358
                 44444444444444444 PP

  == domain 5  score: -0.6 bits;  conditional E-value: 0.68
      NopRA1 104 dlndvPlfysllyssseedeeykkersWiLrllad.GlrtksDlkllkrrrvfelllslynsplldaklrelilelll 180
                 + n +P + +ll +++ +    +ke  W +   +  G+++++ ++ + ++++++ l++l +    d+k+ +  l+ + 
  EPX71905.1 373 EANIIPPLINLLATADFK---IQKEACWAVSNATSgGINQPTQIRYIVSQGAIKPLCNLLAC--QDNKIIQVALDGIE 445
                 567789999999999999...99999999977654268899999988888899999888885..56665555555555 PP

>> HEAT_PBS  PBS lyase HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.0    0.0015       1.8       1      14 [.     180     193 ..     180     205 .. 0.81
   2 ?    0.5   0.0       1.2   1.4e+03      15      26 ..     374     385 ..     349     386 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0015
                 HHHHHHHHHHHCTS CS
    HEAT_PBS   1 vRraAakaLgqlgd 14 
                 vR  A++aLg++  
  EPX71905.1 180 VREQAVWALGNIAG 193
                 8**********986 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 1.2
                 GGGHHHHHHHCT CS
    HEAT_PBS  15 eeaipaLleaLq 26 
                   +ip+L+++L+
  EPX71905.1 374 ANIIPPLINLLA 385
                 5789*****997 PP

>> DUF3552  Domain of unknown function (DUF3552)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   6.9   6.2e-05     0.075      57     120 ..      10      73 ..       5      84 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 6.2e-05
     DUF3552  57 eakeeihklreelekelkerrnelqrlekRllqkeetLdrkeeslekkeesleekekelkqkeq 120
                 e + ++ k +  + ++  +rr+e q++e R +++ee+L+++ +  +  ee  ee +  +++ke+
  EPX71905.1  10 EHRKQNYKGKGAFQADELRRRRETQQIEIRKQKREENLNKRRNLADVSEEPSEEVTPVINEKEN 73 
                 5667788888999999999***************************999988887777666655 PP

>> SEN1_N  SEN1 N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0     0.025        29     524     571 ..     146     191 ..      97     229 .. 0.87
   2 ?    1.3   0.0     0.064        77     526     572 ..     275     319 ..     271     329 .. 0.82
   3 ?    2.9   0.0     0.022        26     551     579 ..     480     508 ..     434     511 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.025
      SEN1_N 524 lerlsdfsspselkellsdpeaaqalisllfspddelyqaalnllkqa 571
                 l+++++  s+++  +++ +++a+  ++sll sp++++++ a+  l+++
  EPX71905.1 146 LTNIAS-GSSDQTHTVV-NSGAVPIFVSLLTSPEKDVREQAVWALGNI 191
                 666666.5566777777.8899999****************9777766 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.064
      SEN1_N 526 rlsdfsspselkellsdpeaaqalisllfspddelyqaalnllkqaf 572
                  lsd    +++++++ d ++ + l+ ll++p+ +++++al  +++++
  EPX71905.1 275 YLSD-GPNEKIQSII-DAGIPRRLVELLMHPNPQIQTPALRSVGNIV 319
                 5677.5577888888.99999******************98777776 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.022
      SEN1_N 551 sllfspddelyqaalnllkqafdvdsRld 579
                  l  s+++e+yq a n++   f++++  +
  EPX71905.1 480 ELQNSANAEIYQKAYNIIERYFGEEDVVE 508
                 566699****************9998665 PP

>> NUSAP  Nucleolar and spindle-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   6.2    0.0046       5.5     256     295 .]      10      53 ..       2      53 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0046
       NUSAP 256 eshkknyKQp.klqtreerRekheqe...RkqkkekvlgarRGl 295
                 e +k+nyK +  +q+ e rR++++q+   Rkqk+e+ l +rR+l
  EPX71905.1  10 EHRKQNYKGKgAFQADELRRRRETQQieiRKQKREENLNKRRNL 53 
                 56899***653799999999888876666*************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (542 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       658  (0.0367003); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.67u 0.32s 00:00:00.99 Elapsed: 00:00:00.48
# Mc/sec: 3420.97
//
Query:       EPX71906.1  [L=152]
Description: ELLA family acetyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.8e-16   58.6   0.0    6.6e-16   58.4   0.0    1.1  1  Acetyltransf_10  Acetyltransferase (GNAT) domain
      1e-09   38.7   0.0    1.4e-09   38.3   0.0    1.3  1  Acetyltransf_7   Acetyltransferase (GNAT) domain
    8.9e-07   29.1   0.0    1.1e-06   28.8   0.0    1.2  1  Acetyltransf_1   Acetyltransferase (GNAT) family
    0.00026   21.6   2.7     0.0012   19.5   0.9    2.2  2  Acetyltransf_5   Acetyltransferase (GNAT) domain
  ------ inclusion threshold ------
      0.016   14.7   0.0      0.024   14.1   0.0    1.5  1  Acetyltransf_15  Putative acetyl-transferase
      0.028   13.8   0.0       0.04   13.3   0.0    1.2  1  GNAT_acetyltr_2  GNAT acetyltransferase 2
      0.036   14.0   0.0      0.062   13.3   0.0    1.5  1  FR47             FR47-like protein


Domain annotation for each model (and alignments):
>> Acetyltransf_10  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.4   0.0   2.6e-19   6.6e-16      32     127 .]      48     147 ..      16     147 .. 0.85

  Alignments for each domain:
  == domain 1  score: 58.4 bits;  conditional E-value: 2.6e-19
  Acetyltransf_10  32 lllvaeeggkivGviel.rdgs..hisllfVdpeyrgqGigkaLleaveeeaekdgikl.eltvnaspyavpfYeklGFkavgeeqeenGirfv 121
                      +l++ ++++k++ +++l  + +  +i++++V+p++r+ G+g+ ++++++++ + + +    ++++a+ y ++fYe++GF  +++   e+ i ++
       EPX71906.1  48 HLMLKDDEDKLLAYARLiGEPNgfRIGRIVVSPNFRRHGYGRLIFQEALNAGKWKYPDAkVVNIQAQAYLKAFYESFGFMIHSDSYLEDDIPHY 141
                      578889999******998777789***************************755555557********************************** PP

  Acetyltransf_10 122 pMekel 127
                      +M+++l
       EPX71906.1 142 DMKLML 147
                      ***986 PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.3   0.0   5.4e-13   1.4e-09      11      75 ..      54     127 ..      23     128 .. 0.64

  Alignments for each domain:
  == domain 1  score: 38.3 bits;  conditional E-value: 5.4e-13
                     T.TEEEEEEEEEEES..TCTEEEEE-GGGTTSSHHHHHHHH......TTSEEE........EE.EEEETHHHHHHHHHHTTEE CS
  Acetyltransf_7  11 d.gkivGfialslld..aeitrlaVdpeyrgkGiGraLlea......aekgii........le.qlelnaekaikfYeklGFe 75 
                     d +k + +++l  +   + i+r++V+p++r++G+Gr + +            +        ++ q++l      +fYe++GF 
      EPX71906.1  54 DeDKLLAYARLIGEPngFRIGRIVVSPNFRRHGYGRLIFQEalnagkW----KypdakvvnIQaQAYL-----KAFYESFGFM 127
                     2566667666666667789999*****************953433330....0233333335566777.....45*******5 PP

>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.8   0.0   4.5e-10   1.1e-06      16     117 .]      31     126 ..      14     126 .. 0.72

  Alignments for each domain:
  == domain 1  score: 28.8 bits;  conditional E-value: 4.5e-10
                     HHHHHHHHHHHHHHSTTC.EEEEEEETTEEEEEEEEEEEETTSTTEEEEEEEEESGGGTTSSHHHHHHHHHHHHHHHT..TESEEEEEEETTEHH CS
  Acetyltransf_1  16 nedaseeefeesfsleae.gllvaeedgeliGfisllkipdekggvayieslaVspeyrgkGlGsaLlealeeraree..gikkivlaveednda 107
                     ++++++ ++ e   + ++ +l +  ++++l+++++l   p+       i +++Vsp++r++G+G++  ++++   + +   +k + +   + +  
      EPX71906.1  31 EQRCPYQDVDET--DLTCdHLMLKDDEDKLLAYARLIGEPN----GFRIGRIVVSPNFRRHGYGRLIFQEALNAGKWKypDAKVVNI---QAQAY 116
                     455555552222..356646666777799*****8888888....899************************944444433344444...44566 PP

                     HHHHHHHTTE CS
  Acetyltransf_1 108 airlYeklGF 117
                       ++Ye +GF
      EPX71906.1 117 LKAFYESFGF 126
                     6999988998 PP

>> Acetyltransf_5  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.9   4.7e-07    0.0012      15      67 ..      31      83 ..      18      90 .. 0.77
   2 ?   -3.2   0.0       5.8   1.5e+04       5      17 ..     119     132 ..     117     144 .. 0.58

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 4.7e-07
  Acetyltransf_5 15 eaaapeldiDefDavcdhllvideaeevVGtyRllrpdeaerlegfysesefd 67
                    e+++p +d+De D +cdhl++ d++ ++ ++ Rl+ + +  r+++ + + +f+
      EPX71906.1 31 EQRCPYQDVDETDLTCDHLMLKDDEDKLLAYARLIGEPNGFRIGRIVVSPNFR 83
                    3456779**************998889******99888777777776666665 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 5.8
  Acetyltransf_5   5 vFreemgaegea.a 17 
                     +F+e +g++ ++ +
      EPX71906.1 119 AFYESFGFMIHSdS 132
                     68888887777633 PP

>> Acetyltransf_15  Putative acetyl-transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   9.2e-06     0.024      26     105 ..      16     103 ..       1     145 [. 0.70

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 9.2e-06
  Acetyltransf_15  26 eeeaitknenkydivqykkkeeLvasvfivkkkyyslvs........silieknvleiYtlyvsekyrgkGlakklLeeslkelkknY 105
                      e+++i++++ +  +v+ +++ + v ++ +  ++   + +          ++e n++ i  ++vs+++r+ G+ + + +e+l++ k +Y
       EPX71906.1  16 ELHSIYYTRIQVFVVEQRCPYQDVDETDLTCDHLMLKDDedkllayaRLIGEPNGFRIGRIVVSPNFRRHGYGRLIFQEALNAGKWKY 103
                      445555555555555555544444444444333333333666666767899****************************999877666 PP

>> GNAT_acetyltr_2  GNAT acetyltransferase 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   1.5e-05      0.04      91     119 ..      66      94 ..      61     120 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.5e-05
  GNAT_acetyltr_2  91 aslsGaRivRiAvhpelqkmGYGsralel 119
                      ++ +G Ri Ri v p++++ GYG  + ++
       EPX71906.1  66 GEPNGFRIGRIVVSPNFRRHGYGRLIFQE 94 
                      6789*******************877664 PP

>> FR47  FR47-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   2.4e-05     0.062      12      48 ..      60      97 ..      52     134 .. 0.67

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 2.4e-05
                EEEEEEE-TTS.SEEEEEE-GGG-SSSHHHHHHHHHHH CS
        FR47 12 laawilrkdgg.elgalqvlpehrrrGlgsrlvkalak 48
                ++a ++ ++ g  +g + v p++rr G+g+++ ++  +
  EPX71906.1 60 AYARLIGEPNGfRIGRIVVSPNFRRHGYGRLIFQEALN 97
                56667767765259****************99876554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       410  (0.022868); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.44
# Mc/sec: 1042.00
//
Query:       EPX71907.1  [L=144]
Description: 40S ribosomal protein S12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-27   95.4   0.8    1.5e-27   95.1   0.8    1.1  1  Ribosomal_L7Ae  Ribosomal protein L7Ae/L30e/S12e/Gadd45 famil
  ------ inclusion threshold ------
        0.1   13.1   0.4       0.46   11.0   0.1    2.2  2  RuvA_C          RuvA, C-terminal domain


Domain annotation for each model (and alignments):
>> Ribosomal_L7Ae  Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.1   0.8   1.7e-31   1.5e-27       1      94 [.      30     124 ..      30     125 .. 0.98

  Alignments for each domain:
  == domain 1  score: 95.1 bits;  conditional E-value: 1.7e-31
                     HHHHHHHHHHHHHTEEEESHHHHHHHHHTTTESEEEEETTSSSGGHHHHHHHHHHHTTEEEEEESCHHHHHHHTTSSSE.CSEEEEEESTTTHHH CS
  Ribosomal_L7Ae   1 daieevlkkakkagklvlGlkevtkalergeaklvilAedvepeekkkllealckekevpyvkvkskkeLGelvgkkrp.vsalaikdegdskdl 94 
                     da++evlk ++++++l++G++e+ kal+r++a+l++l+e++++e ++kl+ealc+e e p++kv + k LGe++g+++  + ++a+k++g+s+++
      EPX71907.1  30 DALKEVLKRSLVHDGLARGIREASKALDRRQAHLCVLCESCDQEAYVKLVEALCAESETPLIKVADPKVLGEWAGLCVLdRDGNARKVVGCSCIA 124
                     5899*****************************************************************************************97 PP

>> RuvA_C  RuvA, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   5.2e-05      0.46      22      45 ..      12      38 ..       7      40 .. 0.89
   2 ?   -1.6   0.0      0.43   3.9e+03      18      25 ..      50      57 ..      48      58 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 5.2e-05
                HHHHHHHC...-TTS-HHHHHHHHHCC CS
      RuvA_C 22 kAvakvla...npgasveelIraALkl 45
                 +v++v++   +p+ sve+++++ Lk 
  EPX71907.1 12 DVVEQVEEqptAPEVSVEDALKEVLKR 38
                5899999999999999*********96 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.43
                HHHHHHHH CS
      RuvA_C 18 keaekAva 25
                +ea kA++
  EPX71907.1 50 REASKALD 57
                58888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       624  (0.0348039); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.27s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 996.16
//
Query:       EPX71908.1  [L=517]
Description: asteroid [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.8e-44  150.2   0.0    9.3e-44  149.8   0.0    1.2  1  XPG_I_2   XPG domain containing
  ------ inclusion threshold ------
      0.087   13.2   0.1       0.26   11.7   0.1    1.7  1  XPG_I     XPG I-region


Domain annotation for each model (and alignments):
>> XPG_I_2  XPG domain containing
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.8   0.0     1e-47   9.3e-44       3     246 ..     107     339 ..     105     342 .. 0.90

  Alignments for each domain:
  == domain 1  score: 149.8 bits;  conditional E-value: 1e-47
     XPG_I_2   3 pfmvpavieaLknrwkakditevvpgEADkfcAvlArklgcaVLTsDSDLlvhdl.geegsvifldsielssrvkkaepksklsiratkyrpaeiakkl 100
                 +++vp++ ++Lk   +a+  ++v+++EADk+cA+ Ar+l+++VL++DSDLl ++l ++++++++l+si+++s       k    ++++ y ++++ +++
  EPX71908.1 107 HLCVPIAHHVLKG--IAGACVVVCNQEADKYCAIRARELDGIVLSQDSDLLMFNLeNPHTGYVPLHSISITS-------K---GLQGKLYNFQDLKRHF 193
                 79**********8..****************************************889**************.......3...699************* PP

     XPG_I_2 101 gvpslqllAfel.nrdphlklaelvkrakssskv....aeksseyvaflkeyeessevksatsanalqlldprvseLllqleqaaafnkeeeapevYlp 194
                  ++ ++llA++l ++++  + +  ++ + ++ ++    ++k +++++++++ e  ++v++ +s  + +l  ++++ ++++++q + +++  + pe++lp
  EPX71908.1 194 PFD-IHLLAAYLgVEGHPEDQVIDYHSSFQQICKtleeNVKAGTLEKLISTQE-LHRVHKFYSLDDISLYSSQLNDFIWGRVQ-ELLHSTLDPPEMWLP 289
                 **9.********87666555555555555555542222566777888888777.*****************************.9************** PP

     XPG_I_2 195 flvedhsrrcaWeegkdiRllAysllnlsskgerketvlEylrkgqriakee 246
                 +l e ++r c+W+e++ +Rl+Ay+++ ++  ++ +++vlEy r++ +++k+ 
  EPX71908.1 290 QLPELPARPCSWTESAPLRLQAYANFFTN--QKTNTQVLEYSRNYAQLSKKL 339
                 **************************999..799***********9999875 PP

>> XPG_I  XPG I-region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   2.9e-05      0.26       7      41 ..     125     158 ..     120     162 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 2.9e-05
                 EEE-SS-HHHHHHHHHHTTSSSEEE-SSSHHHHTT CS
       XPG_I   7 yvvApgEAEAqcayLqkkglvdaviseDsDlllFG 41 
                 +vv   EA+  ca   +++l   v+s+DsDll+F 
  EPX71908.1 125 VVVCNQEADKYCAI-RARELDGIVLSQDSDLLMFN 158
                 6777899**99995.666677899**********6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (517 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       636  (0.0354733); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 3564.09
//
Query:       EPX71909.1  [L=579]
Description: zinc finger protein Bpb1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-39  135.2   2.4    2.2e-39  134.3   2.4    1.5  1  SF1-HH        Splicing factor 1 helix-hairpin domain
    5.4e-12   45.2  11.5      2e-06   27.6   1.4    2.4  2  zf-CCHC       Zinc knuckle
    1.8e-06   27.7   0.1    3.2e-06   26.9   0.1    1.4  1  KH_1          KH domain
    1.1e-05   25.3   3.1      0.005   16.8   0.6    2.5  2  zf-CCHC_3     Zinc knuckle
     0.0015   18.4  11.3       0.25   11.2   0.4    4.0  3  zf-CCHC_6     Zinc knuckle
  ------ inclusion threshold ------
      0.019   14.7   7.8       0.34   10.7   0.7    2.4  2  zf-CCHC_4     Zinc knuckle
      0.064   13.1  11.9       0.91    9.4   2.6    2.4  2  zf-CCHC_2     Zinc knuckle
       0.16   11.8   0.4       0.31   10.8   0.4    1.4  1  UPF0167       Uncharacterised protein family (UPF0167)
       0.36   10.3   2.6         12    5.5   0.2    2.4  2  zf-ribbon_3   zinc-ribbon domain


Domain annotation for each model (and alignments):
>> SF1-HH  Splicing factor 1 helix-hairpin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.3   2.4   1.1e-42   2.2e-39       1     113 []      70     182 ..      70     182 .. 0.95

  Alignments for each domain:
  == domain 1  score: 134.3 bits;  conditional E-value: 1.1e-42
      SF1-HH   1 rksrWgeeeekekkak.ieglptaipgnltqeqleayllqlrieeitrkLrtgdlvppeeeeRspSPpPvYdanGkRtntrevrvrkkLekerheliee 98 
                 rk+ Wg+ +  +++ + +++l+  i + +t+eq+e +++++r+eeit+kLrtg++vp++ +eRspSPpP+Yd++G+R+ntre+r++kkLe+erh++ie+
  EPX71909.1  70 RKHYWGKPTPIDEMLPsQMELELSIASCMTNEQVELFAMNVRLEEITQKLRTGSVVPRD-RERSPSPPPQYDNHGRRLNTREIRYKKKLEDERHRIIEK 167
                 67889999888888876889**********************************88777.*************************************** PP

      SF1-HH  99 avkiipsfkpPadYk 113
                 a+k++p+fk+P+dY+
  EPX71909.1 168 AMKTVPNFKAPSDYR 182
                 **************7 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   3.0   3.8e-08   7.6e-05       2      18 .]     311     327 ..     310     327 .. 0.94
   2 !   27.6   1.4     1e-09     2e-06       2      17 ..     336     351 ..     335     352 .. 0.94

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 3.8e-08
                 CTSSSSSSSSTTTTSTS CS
     zf-CCHC   2 kCynCGepGHiardCpk 18 
                 +C nCG++GH+  dCp+
  EPX71909.1 311 VCQNCGNVGHRRYDCPE 327
                 8***************6 PP

  == domain 2  score: 27.6 bits;  conditional E-value: 1e-09
                 CTSSSSSSSSTTTTST CS
     zf-CCHC   2 kCynCGepGHiardCp 17 
                 +C++CG+ GHiardCp
  EPX71909.1 336 VCRHCGNAGHIARDCP 351
                 8**************9 PP

>> KH_1  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   0.1   1.6e-09   3.2e-06       9      64 ..     202     272 ..     188     274 .. 0.73

  Alignments for each domain:
  == domain 1  score: 26.9 bits;  conditional E-value: 1.6e-09
                 GHHHHHHTGGGHHHHHHHHHHT-EEEEES.STT................T.-EEEEEE.SHHHHHHHHHHH CS
        KH_1   9 slvgriIGkgGsnIkeIreetgakIkvpk.sedeg.............sderevtisG.speavekAkeli 64 
                 +++g++IG++G ++k++++++gakI + + ++  +             +++  + ++  s++++ +A++li
  EPX71909.1 202 NFIGLLIGPRGHTLKDMESKSGAKIAIRGkGSVKEgkgksdpsvrgnmEEDLHCLVTAdSEDKISHAIRLI 272
                 46************************884333333677777788885555555556787777788887777 PP

>> zf-CCHC_3  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.6   2.5e-06     0.005       3      25 ..     308     327 ..     306     332 .. 0.85
   2 !    8.5   0.1     0.001         2       4      22 ..     334     352 ..     331     369 .. 0.78

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 2.5e-06
   zf-CCHC_3   3 asaaCQkClkkGHwtYECknage 25 
                 ++++CQ+C+  GH  Y C+   e
  EPX71909.1 308 ENQVCQNCGNVGHRRYDCP---E 327
                 6899**************9...3 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.001
   zf-CCHC_3   4 saaCQkClkkGHwtYECkn 22 
                 +++C  C+  GH +  C+ 
  EPX71909.1 334 NIVCRHCGNAGHIARDCPV 352
                 789***********99996 PP

>> zf-CCHC_6  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.4   0.00027      0.54       4      22 ..     312     328 ..     311     333 .. 0.86
   2 !   11.2   0.4   0.00013      0.25       4      24 ..     337     355 ..     334     366 .. 0.87
   3 ?    1.9   0.5       0.1     2e+02      24      36 ..     441     453 ..     431     456 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00027
   zf-CCHC_6   4 CknCGAFGHtarSkrCPmk 22 
                 C+nCG  GH++    CP +
  EPX71909.1 312 CQNCGNVGHRR--YDCPER 328
                 *********99..788865 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00013
   zf-CCHC_6   4 CknCGAFGHtarSkrCPmkcw 24 
                 C+ CG  GH a  + CP++++
  EPX71909.1 337 CRHCGNAGHIA--RDCPVRNQ 355
                 ***********..89**9975 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.1
   zf-CCHC_6  24 wngalvpqplgsk 36 
                 w++a++pqp+ s+
  EPX71909.1 441 WQQAMPPQPVPST 453
                 99*******9887 PP

>> zf-CCHC_4  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.7   0.00017      0.34      32      48 ..     310     326 ..     309     327 .. 0.92
   2 ?    7.6   1.3    0.0016       3.1      30      48 ..     333     351 ..     332     352 .. 0.93

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00017
   zf-CCHC_4  32 sfCyiCgvlGHsdkrCd 48 
                 ++C +Cg +GH + +C+
  EPX71909.1 310 QVCQNCGNVGHRRYDCP 326
                 58**************7 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0016
   zf-CCHC_4  30 LrsfCyiCgvlGHsdkrCd 48 
                 L ++C  Cg  GH +++C+
  EPX71909.1 333 LNIVCRHCGNAGHIARDCP 351
                 7899**************8 PP

>> zf-CCHC_2  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   2.0   0.00075       1.5       5      21 .]     311     327 ..     308     327 .. 0.95
   2 ?    9.4   2.6   0.00046      0.91       5      20 ..     336     351 ..     336     352 .. 0.96

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00075
   zf-CCHC_2   5 vChiCgkkGHyIqdCPt 21 
                 vC  Cg+ GH   dCP+
  EPX71909.1 311 VCQNCGNVGHRRYDCPE 327
                 8***************6 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00046
   zf-CCHC_2   5 vChiCgkkGHyIqdCP 20 
                 vC+ Cg+ GH  +dCP
  EPX71909.1 336 VCRHCGNAGHIARDCP 351
                 8**************9 PP

>> UPF0167  Uncharacterised protein family (UPF0167)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.4   0.00016      0.31      14      60 ..     302     349 ..     297     374 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00016
     UPF0167  14 gaiek.eeekCqcCgkereliyespfysvedvealCpwCiadGsaakk 60 
                 g++ + e+++Cq Cg+  +  y  p   ++ ++ +C +C + G++a+ 
  EPX71909.1 302 GTLRDdENQVCQNCGNVGHRRYDCPERVNHTLNIVCRHCGNAGHIARD 349
                 56666699************************************9986 PP

>> zf-ribbon_3  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.2    0.0059        12      13      24 ..     306     317 ..     302     318 .. 0.82
   2 ?    4.4   0.2     0.013        26      16      23 ..     334     341 ..     332     342 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0059
  zf-ribbon_3  13 ssddnvCpyCGt 24 
                  +++ +vC +CG 
   EPX71909.1 306 DDENQVCQNCGN 317
                  68899******7 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.013
  zf-ribbon_3  16 dnvCpyCG 23 
                   +vC +CG
   EPX71909.1 334 NIVCRHCG 341
                  589***** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (579 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       673  (0.037537); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.44
# Mc/sec: 3968.92
//
Query:       EPX71910.1  [L=305]
Description: histidinol-phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.6e-16   59.1   0.4      1e-15   58.4   0.4    1.3  1  PHP       PHP domain


Domain annotation for each model (and alignments):
>> PHP  PHP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.4   0.4   5.8e-20     1e-15       2     167 .]       5     214 ..       4     214 .. 0.80

  Alignments for each domain:
  == domain 1  score: 58.4 bits;  conditional E-value: 5.8e-20
                 EEE-.-CCC.--.S-H..HHHHHHHHHCT-SEEEEEEEEBTT......................HHHHHHHHHHHHTTTTSEEEEEEE........... CS
                 xxxx.xxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx... RF
         PHP   2 lHvH.teys.lldgalsieelvkkakelglkaiaiTDhgnlf......................gyvefykaakkkykagikpiiGleayvaddse... 73 
                  H+H ++++   +g+l  e+++ +a+++g++++ +T+h+++                       +y++ +k++++ky+++i+++iG e   ++ +    
  EPX71910.1   5 SHSHsGQFClHAQGTL--EQVILEAIQQGFHTFSFTEHCPRKyaedlypeeshltsddlfhtfdEYIQTAKQLREKYADKIQILIGSETEYIRPDSidl 101
                 59**999**6344677..**********************************************************************65555544233 PP

                 .............E....EHHHH...................................HHHHHHHHH..........HHHHHHS............... CS
                 ...xxxxxxxxxxxxxxxxxxxx...................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         PHP  74 ...kerpshltllaknqeGyknl...................................lkllskaylegfyrkpridkellekhsegLivlsgclkGev 134
                           +                                               +++l+ +y++++y+     + l+ +h  +Li+l +  +   
  EPX71910.1 102 lreL------VA----------KydldylvgsvhhvnaipidfsvelwhkalehvggcYEKLFLDYFDHQYTLLTSLQPLVVAH-FDLICLYANEEA-- 181
                 3331......22..........022333366666667778888888888888999999*********88888777777777778.899999998755.. PP

                 ...TTGG.HHHHHHHHHHHHHHHC.T-EEEEEGC CS
                 xxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxx RF
         PHP 135 fealdli.eveekaeealeelakifgdyiEints 167
                  +++++  ev++++e+++e++ ++ g ++Eints
  EPX71910.1 182 MKVFTNSsEVWKLIERNIEYVNSY-GGVFEINTS 214
                 34333325***************8.*******96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (305 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       648  (0.0361426); expected 358.6 (0.02)
Passed bias filter:                      545  (0.0303977); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 2150.30
//
Query:       EPX71911.1  [L=275]
Description: switch-activating protein Sap1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     0.0034   17.2   2.8      0.023   14.5   0.8    2.4  2  Nsp1_C        Nsp1-like C-terminal region
  ------ inclusion threshold ------
      0.019   14.9   0.3      0.056   13.4   0.3    1.8  1  Imm51         Immunity protein 51
      0.023   15.0   8.9      0.089   13.0   8.9    2.0  1  ATG16         Autophagy protein 16 (ATG16)
      0.053   12.6   0.3      0.079   12.0   0.3    1.2  1  Citrate_synt  Citrate synthase, C-terminal domain
      0.055   13.7   0.1       0.11   12.8   0.1    1.4  1  RsdA_SigD_bd  Anti-sigma-D factor RsdA to sigma factor bindin
      0.084   13.1   4.1       0.35   11.1   3.9    2.1  1  Seryl_tRNA_N  Seryl-tRNA synthetase N-terminal domain
       0.21   11.5  10.8       0.43   10.5   0.1    2.5  2  SIKE          SIKE family
        0.4   11.0  10.2        2.2    8.6   0.5    3.8  4  DUF4164       Domain of unknown function (DUF4164)
       0.95   10.0   3.7          2    8.9   1.9    2.4  2  NPV_P10       Nucleopolyhedrovirus P10 protein
        1.5    9.4   7.4    1.2e+02    3.2   7.4    2.7  1  NPA           Nematode polyprotein allergen ABA-1
        2.1    8.2   7.9         16    5.4   5.8    2.8  2  Sec34         Sec34-like family
        2.1    9.5   8.7        6.2    8.0   2.4    2.9  2  SOGA          Protein SOGA
        2.4    8.7   7.1          2    8.9   3.5    2.3  2  DUF16         Protein of unknown function DUF16
        5.3    7.1  13.3         14    5.7   0.3    2.3  2  UPF0242       Uncharacterised protein family (UPF0242) N-term
        6.9    7.0   8.6        1.5    9.2   4.0    2.1  2  DUF641        Plant protein of unknown function (DUF641)


Domain annotation for each model (and alignments):
>> Nsp1_C  Nsp1-like C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0      0.16   1.9e+02      17      36 ..     110     129 ..      91     135 .. 0.79
   2 !   14.5   0.8   1.9e-05     0.023      22      81 ..     145     204 ..     139     208 .. 0.93

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.16
      Nsp1_C  17 nktldelinkWtteLeeqek 36 
                   +ld+l  +W+  L+e ++
  EPX71911.1 110 EDELDQLCDEWKARLSELQQ 129
                 56899999999998888665 PP

  == domain 2  score: 14.5 bits;  conditional E-value: 1.9e-05
      Nsp1_C  22 elinkWtteLeeqekeFeeqakkvneWDrvLvengekIskLysevleaeqeqnkidqeLe 81 
                 + in+  ++L+e ++  +   +kvn   ++L +n ekI +L   v+e   ++++i q L+
  EPX71911.1 145 DEINERLKKLTEDQQNVDMLVAKVNFLSKHLHDNEEKIMQLSARVEELYTDNKRIHQLLD 204
                 667888899************************************************997 PP

>> Imm51  Immunity protein 51
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.3   4.7e-05     0.056      56     103 ..     151     206 ..     143     208 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 4.7e-05
       Imm51  56 lleklefDpEagmFvay........sedkealkelaellkelledeeklrelieea 103
                 l++  e     +m va          +++e++++l + ++el++d++++ +l++ +
  EPX71911.1 151 LKKLTEDQQNVDMLVAKvnflskhlHDNEEKIMQLSARVEELYTDNKRIHQLLDHN 206
                 444444455678988888899999999*************************9875 PP

>> ATG16  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   8.9   7.5e-05     0.089      60     156 ..      95     192 ..       6     207 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 7.5e-05
       ATG16  60 ekeasasqsnskqsakiqsleqklaqlreelaelyksrge..laqrllelneelqkleeklkedeerlaeleaeraaletklkdreeelrekeklvqdl 156
                 +++a +++ ++k++ +  +l+q++ ++++ l+el++ r++    +r  + n+e+ ++ +kl+ed+++++ l a+++ l++ l d+ee++ ++ + v++l
  EPX71911.1  95 QRLAHRQP-GMKTTPEEDELDQLCDEWKARLSELQQYREKflVGKRKCDCNDEINERLKKLTEDQQNVDMLVAKVNFLSKHLHDNEEKIMQLSARVEEL 192
                 45555555.7788888999**************976665511689*********************************************999999887 PP

>> Citrate_synt  Citrate synthase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.3   6.6e-05     0.079      50     146 ..     106     233 ..     103     263 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 6.6e-05
                   S---HHHHHHHHHHHHCT.................TS--HHHHHHHHCSSTTS-HHHHHHHHHHHHHHHSTT.............CTCHHHHHHHHH CS
  Citrate_synt  50 elPtkeelkefkeelaea.................rklpekvlealealpkdahpmavlraavsalsaddee.............seakeeseeaal 116
                     P+++el+++++e++++                   +++++ e l++l +d + +++l a v+ ls+  ++             +  +++ + ++l
    EPX71911.1 106 TTPEEDELDQLCDEWKARlselqqyrekflvgkrkCDCNDEINERLKKLTEDQQNVDMLVAKVNFLSKHLHDneekimqlsarveELYTDNKRIHQL 202
                   5799999***99999998889999999999999866889***********9999***********88877777778888887776333333556677 PP

                   HHHHHHHHHHHHHHHHHHHHHTTS.--.--- CS
  Citrate_synt 117 rdalkliAklptiaaaiyrarlgrepl.epd 146
                    d  +++Ak+ t   +   ++++ +p   p+
    EPX71911.1 203 LDHNDILAKMETHSPYGPPHSVNMNPSmTPN 233
                   7799999999999888888888743333555 PP

>> RsdA_SigD_bd  Anti-sigma-D factor RsdA to sigma factor binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   8.9e-05      0.11      15      40 ..      97     122 ..      96     126 .. 0.94

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 8.9e-05
                   HHTT-----SSHHHHHHHHHHHHHHH CS
  RsdA_SigD_bd  15 LAgrgpvdtddpdeyeLAaLLadWRd 40 
                   LA+r+p + ++p+e+eL +L  +W++
    EPX71911.1  97 LAHRQPGMKTTPEEDELDQLCDEWKA 122
                   8***********************97 PP

>> Seryl_tRNA_N  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   3.9   0.00029      0.35      14     100 ..      93     192 ..      83     195 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00029
                   HHHHHCCCT...CCCHHHHHHHHHHHHHHHHHHHHHHHHHH......HHHHHHHCCCCCCTT....S-TCCCCCCCHHHHHHHHHHHHHHHHHHHHH CS
  Seryl_tRNA_N  14 vkeklkkRg...edkadvdelleldekrrelqveleelqae......rNelskeIgkakkkk....edaeeliaevkelkeelkaleaelkeleael 97 
                   ++++l++R+   + + + del +l +++++  +el++ +++      +  ++ eI +  kk     ++ + l+a+v+ l++ l + e++  +l+a++
    EPX71911.1  93 YEQRLAHRQpgmKTTPEEDELDQLCDEWKARLSELQQYREKflvgkrKCDCNDEINERLKKLtedqQNVDMLVAKVNFLSKHLHDNEEKIMQLSARV 189
                   6678888887777788889999999****9999999999753333325677778877776666666999**************************99 PP

                   HHH CS
  Seryl_tRNA_N  98 ekl 100
                   e+l
    EPX71911.1 190 EEL 192
                   987 PP

>> SIKE  SIKE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.1   0.00036      0.43     123     173 ..      22      74 ..       6      76 .. 0.78
   2 ?    2.3   6.9      0.12   1.4e+02      81     177 ..     109     203 ..      82     206 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00036
        SIKE 123 lkk..klseevesqeekieeMaaVmrkavevdeeesakeqeklaqLetENkeL 173
                 +++  k++++  s+eeki+ M  V+++  e+ +++ ++   k+a++  EN++L
  EPX71911.1  22 SSSpaKAQRTHLSLEEKIKLMRLVVQHKHELVDRKTSEFYAKIARIGYENEGL 74 
                 33344555555689************************************998 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.12
        SIKE  81 ENreLrasleehqsaLelImsKYReqvskllkakkeekkeavlkk...klseevesqeekieeMaaVmrkavevdeeesakeqeklaqLetENkeLRel 176
                 E +eL +  +e ++ L   +++YRe+     ++ +++++   + k   + +++v+ + +k++     ++k  + +ee+ ++   ++++L t+Nk + +l
  EPX71911.1 109 EEDELDQLCDEWKARLSE-LQQYREKFLVGKRKCDCNDEINERLKkltEDQQNVDMLVAKVN----FLSKHLHDNEEKIMQLSARVEELYTDNKRIHQL 202
                 778888888888888876.5889998865555555554444444333344444444444444....566777888999999999999999999999998 PP

        SIKE 177 L 177
                 L
  EPX71911.1 203 L 203
                 8 PP

>> DUF4164  Domain of unknown function (DUF4164)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.1      0.52   6.2e+02      12      51 ..      34      74 ..      24      80 .. 0.78
   2 ?    3.1   0.1     0.094   1.1e+02      42      78 ..      88     126 ..      77     130 .. 0.75
   3 ?    3.9   1.1     0.053        63       4      53 ..     111     163 ..     108     176 .. 0.72
   4 ?    8.6   0.5    0.0018       2.2      28      58 ..     176     206 ..     158     213 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.52
     DUF4164 12 rLeaaldsLEkavdrrlea.erkrdeleaeiealgedrsRL 51
                 Le++++ +   v+++ e  +rk++e+ a+i+++g + + L
  EPX71911.1 34 SLEEKIKLMRLVVQHKHELvDRKTSEFYAKIARIGYENEGL 74
                68888888888888888853889999999999998877666 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.094
     DUF4164  42 ealgedrsRLaeeL..dqaearaarleevnrEvsrrLka 78 
                 + ++  ++RLa++   ++++ ++ +l ++++E + rL  
  EPX71911.1  88 SIMRVYEQRLAHRQpgMKTTPEEDELDQLCDEWKARLSE 126
                 777777888888764478889999999999999999976 PP

  == domain 3  score: 3.9 bits;  conditional E-value: 0.053
     DUF4164   4 keleaaltrLeaaldsLEkavdrrleaerkr...deleaeiealgedrsRLae 53 
                 +el++  ++ +a l +L +  ++ l  +rk    de+++++++l+ed++  ++
  EPX71911.1 111 DELDQLCDEWKARLSELQQYREKFLVGKRKCdcnDEINERLKKLTEDQQNVDM 163
                 56666666667777777766666666666667779999999999999887775 PP

  == domain 4  score: 8.6 bits;  conditional E-value: 0.0018
     DUF4164  28 leaerkrdeleaeiealgedrsRLaeeLdqa 58 
                  ++e+k  +l a++e+l  d +R+ + Ld  
  EPX71911.1 176 HDNEEKIMQLSARVEELYTDNKRIHQLLDHN 206
                 4789999*********************975 PP

>> NPV_P10  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0         6   7.1e+03      38      56 ..     111     129 ..     105     134 .. 0.67
   2 ?    8.9   1.9    0.0017         2      17      66 ..     158     204 ..     144     221 .. 0.68

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 6
     NPV_P10  38 telnekLdaqsaqLaelet 56 
                 +el +  d+  a L el++
  EPX71911.1 111 DELDQLCDEWKARLSELQQ 129
                 5666666777777777765 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0017
     NPV_P10  17 ddkVdalqqqvddvqenlpdvtelnekLdaqsaqLaeletkvenIqdiLn 66 
                 ++ Vd l ++v+ +++ l d    +ek+ ++sa ++el t  + I+++L 
  EPX71911.1 158 QQNVDMLVAKVNFLSKHLHD---NEEKIMQLSARVEELYTDNKRIHQLLD 204
                 45667777777777777777...347777777777777777777776665 PP

>> NPA  Nematode polyprotein allergen ABA-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   7.4       0.1   1.2e+02      72     110 ..     144     182 ..      23     193 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.1
         NPA  72 geeeaeelkklkesgasaeelkkkldeligeledekkka 110
                 ++e  e lkkl e ++++++l +k++ l + l+d+++k 
  EPX71911.1 144 NDEINERLKKLTEDQQNVDMLVAKVNFLSKHLHDNEEKI 182
                 567778889999999999999999999999999999987 PP

>> Sec34  Sec34-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.64   7.6e+02      29      56 ..      46      73 ..      34      94 .. 0.82
   2 ?    5.4   5.8     0.013        16      42      89 ..     146     194 ..     105     218 .. 0.47

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.64
       Sec34 29 leekfksvsektsslheaceqlleeqkr 56
                +++k++ v+ kts++ ++  ++  e++ 
  EPX71911.1 46 VQHKHELVDRKTSEFYAKIARIGYENEG 73
                578899999*****99998887766665 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.013
       Sec34  42 slheaceqlleeqkrleelaeeieekLkyFeeldpitrkLnspgss.lv 89 
                 +++e+ ++l+e+q++++ l+ +++   k+  + ++   +L++  ++   
  EPX71911.1 146 EINERLKKLTEDQQNVDMLVAKVNFLSKHLHDNEEKIMQLSARVEElYT 194
                 5555555555555555555555544444444444444444444433222 PP

>> SOGA  Protein SOGA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.5     0.077        93      35      95 .]       7      74 ..       4      74 .. 0.58
   2 ?    8.0   2.4    0.0052       6.2      55      93 ..     147     197 ..     110     199 .. 0.69

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.077
        SOGA 35 eeLnkyksklgeeessleeee.......eassdsskeaelkeeLklarlqineLsgkvvkLqvenrvL 95
                 eL+ yk k  + + s++ ++        +++ +     ++++ +l+  + +e   k+ ++ +en++L
  EPX71911.1  7 MELKSYKRKNASLSPSSSPAKaqrthlsLEEKIKLMRLVVQHKHELVDRKTSEFYAKIARIGYENEGL 74
                57888888776655444443323344332222233334456666777777888888888888888876 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0052
        SOGA  55 e............eassdsskeaelkeeLklarlqineLsgkvvkLqvenr 93 
                              + +  ++k + l ++L+  +++i +Ls +v +L  +n+
  EPX71911.1 147 InerlkkltedqqNVDMLVAKVNFLSKHLHDNEEKIMQLSARVEELYTDNK 197
                 1444555544433556667788899*********************99997 PP

>> DUF16  Protein of unknown function DUF16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.1      0.49   5.8e+02      45      79 ..      34      68 ..       6      99 .. 0.64
   2 ?    8.9   3.5    0.0017         2      32      83 ..     150     201 ..     111     214 .. 0.72

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.49
                ...HHHHHHHHHHHHHHHHHHHHHHHHHHHHH... CS
       DUF16 45 klgeqinkleqkvekqgekikelkveqkaqgeeln 79
                +l+e+i+ +   v+++ e +++ + e  a+ +++ 
  EPX71911.1 34 SLEEKIKLMRLVVQHKHELVDRKTSEFYAKIARIG 68
                56677777777777777777777666666665555 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0017
                 BHHHHHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHH....... CS
       DUF16  32 nkqrLkkieakvdklgeqinkleqkvekqgekikelkveqkaqgeelnkvde 83 
                   ++L++ +++vd+l  ++n l ++ +  +eki++l+++++    + +++++
  EPX71911.1 150 RLKKLTEDQQNVDMLVAKVNFLSKHLHDNEEKIMQLSARVEELYTDNKRIHQ 201
                 3356677788999999999999999999999999999999887765555444 PP

>> UPF0242  Uncharacterised protein family (UPF0242) N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.3     0.012        14      93     149 ..      45     102 ..       4     110 .. 0.70
   2 ?    4.1   7.9     0.036        43      96     183 ..     108     193 ..     104     204 .. 0.70

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.012
     UPF0242  93 elqeeeeeLkeeldakeeelerlkeenqqLqekleaiae.dfeelkleleeqLaekqe 149
                  +q+++e   ++ ++   +++r   en+ L + +e + + ++    + +e++La++q 
  EPX71911.1  45 VVQHKHELVDRKTSEFYAKIARIGYENEGLAIHTESACRnQIISIMRVYEQRLAHRQP 102
                 256777777777888888899999********99998776999999999999999986 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.036
     UPF0242  96 eeeeeLkeeldakeeelerlkeenqqLqekleaiaedfeelkleleeqLaekqellqeyqetieeqrsvlekrqdqieqLeskVrDln 183
                  ee+eL +  d+ +  l +l++  +++ + + +   d ++   e  ++L e q+ ++ + ++++ + + l   +++i qL ++V+ l 
  EPX71911.1 108 PEEDELDQLCDEWKARLSELQQYREKFLVGKRK--CDCNDEINERLKKLTEDQQNVDMLVAKVNFLSKHLHDNEEKIMQLSARVEELY 193
                 567777777777777777777777766654444..35555555555677888888888888888888888888888888888888775 PP

>> DUF641  Plant protein of unknown function (DUF641)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1       1.4   1.7e+03      71     100 ..      30      59 ..       7      81 .. 0.47
   2 ?    9.2   4.0    0.0013       1.5      49     125 ..     123     199 ..     109     201 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 1.4
      DUF641  71 aeeseleaeiqeqrsllktyeitvkkleae 100
                  ++ +le +i+  r +++     v++  +e
  EPX71911.1  30 RTHLSLEEKIKLMRLVVQHKHELVDRKTSE 59 
                 333333344444444444444444443343 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.0013
      DUF641  49 eLkklselkrlyrkkqkkkaseaeeseleaeiqeqrsllktyeitvkkleaelkakdseieeLkekLeeaeksnkkl 125
                  L +l + +++++  ++k +++ e +e  +++ e ++ ++ + + v+ l ++l+  +++i++L +++ee+   nk++
  EPX71911.1 123 RLSELQQYREKFLVGKRKCDCNDEINERLKKLTEDQQNVDMLVAKVNFLSKHLHDNEEKIMQLSARVEELYTDNKRI 199
                 6888999999999988888776666666779999999********************************99988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (275 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1277  (0.0712254); expected 358.6 (0.02)
Passed bias filter:                      557  (0.031067); expected 358.6 (0.02)
Passed Vit filter:                        74  (0.00412739); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 1872.62
//
Query:       EPX71912.1  [L=530]
Description: guanine deaminase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.2e-81  272.9   0.0    5.2e-81  272.6   0.0    1.1  1  Amidohydro_1  Amidohydrolase family
    6.4e-12   45.7   0.8      7e-10   39.0   0.0    2.2  2  Amidohydro_3  Amidohydrolase family
  ------ inclusion threshold ------
      0.022   14.1   0.0      0.051   12.9   0.0    1.5  1  A_deaminase   Adenosine/AMP deaminase
       0.12   12.7   0.1        0.3   11.4   0.1    1.7  1  fn2           Fibronectin type II domain


Domain annotation for each model (and alignments):
>> Amidohydro_1  Amidohydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  272.6   0.0   1.2e-84   5.2e-81       2     343 ..      69     441 ..      68     442 .. 0.97

  Alignments for each domain:
  == domain 1  score: 272.6 bits;  conditional E-value: 1.2e-84
                   EEE-EEEEEEECETTECSSS....GHHHHH...........STTHHHHHHHHHHHHHHHHTTEEEEEEEEHSSTHHHHHHHHHHHTSSSEEEEEEES CS
  Amidohydro_1   2 vlPGlIDaHvHleqsllrga....tledwl...........vppetaaealesgiktalksGtttvadmgattstgiealleaaeelplglrilggk 83 
                    +PG+ID+H+H++q+++ g     +l++wl            + + a e++ ++i+++l  Gtt++ +++  + ++ ++l+e +  l  g+r+++gk
    EPX71912.1  69 FFPGFIDTHIHAPQYPNAGFgidvPLLKWLekytfplessfRNLDKALEVYYRVITRTLAYGTTFASYFSSLHAPASALLAELCFLL--GQRAYIGK 163
                   58**************988899***************************************************99999999999997..******** PP

                   SEGGS........GCCCSHHHHHHHHHHHHHHHHHHCTTTCEEEEEEECGTCCSHHHHHHHHHHHHHHHTTEEEEEETSSCHHHHHHHHHHTTTEEE CS
  Amidohydro_1  84 vsldr........gsaetskasreklkagaaetikgkadgvvkvalapheapafsdeelkealkeakkrdlpvaiHaletkgevedaeaafgetieh 172
                   +++d+        +s+e+s++ +  l++ +  +++++++++v+++++p++ap++++++l+++ + a+++dlp+++H++e++ge++ +++ f+    +
    EPX71912.1 164 CNMDTlspphyceKSPESSIEATNVLVSFM--SKLDPERKMVSPIVTPRFAPSCTKDLLQACGNFAAAHDLPIQTHISENRGEIALVRDLFP---DR 255
                   *****************************9..99**********************************************************...99 PP

                   ETTTTSTCCHHTTTHCCEEEHCTCEEEHHHHHHHHHHHHHHCEEHHHHHHHHSEHHHHHHHHHHHHTSCEEEEEECTTSSCCGGHHHHHHHHHHHHH CS
  Amidohydro_1 173 gthlevaeslglldeiklilahgvhltpteaellkerlkeagvahcpfsnsilrsgrealrkaldeGvkvglgtDgaasgnslnlleelrlalklqr 269
                   +++++v++ + ll++ k++lahgv+l+++e+e++  r  ++g++hcp+sn +++sg++++r++ld+Gvkv+lgtD ++ g ++n+l  +r+a++++r
    EPX71912.1 256 KSYTDVYDHYRLLTP-KTVLAHGVYLEDEEIETILNR--QSGISHCPTSNAVIASGMANVRRLLDAGVKVSLGTD-VSGGYTPNMLIAIRQAALTSR 348
                   99*************.*********************..************************************.********************* PP

                   HCCTT..TTHCHCHHHHHHHHHTHHHHHHTT-TTTSSSS-TTSB--EEEECC..CT...............CGGGTTTCTSEEEEEEEETTEE CS
  Amidohydro_1 270 gllye..deegglslkealrmaTingAkalglddkvGsievGkdADlvvvdl..di...............laafvglkkdgnvkkvivkGkl 343
                   +l+    d +  l+l+e+l++aT++gA++lg+  +vGs+e+Gk +D+ v+d   ++               l+++ ++ +d+n+++v+v+Gkl
    EPX71912.1 349 SLASVlkDTRIILDLSELLYLATQGGAEVLGRGAEVGSFEEGKNWDALVIDVspQSnspvdvyehdswehiLSKWIFNGDDRNIAQVWVNGKL 441
                   ****************************************************7622567888899999999********************98 PP

>> Amidohydro_3  Amidohydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.9   0.5    0.0034        15      11      20 ..      70      79 ..      68      91 .. 0.88
   2 !   39.0   0.0   1.6e-13     7e-10     271     472 ..     226     442 ..     207     463 .. 0.81

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.0034
  Amidohydro_3 11 lPGFvDsHtH 20
                  +PGF+D H+H
    EPX71912.1 70 FPGFIDTHIH 79
                  6********* PP

  == domain 2  score: 39.0 bits;  conditional E-value: 1.6e-13
  Amidohydro_3 271 aadergldvaihaigdaavddvldafeaaaekngnqdrr..........rlehaegvtesqiervaalqvaagvqpvfnfedelldsrlgperargs 357
                    a++++l++  h+ ++    ++++ +   +++++++d++           l+h+  + +++ie +   q  ++ +p +n+             a+g 
    EPX71912.1 226 FAAAHDLPIQTHISENRGEIALVRDLF--PDRKSYTDVYdhyrlltpktVLAHGVYLEDEEIETILNRQSGISHCPTSNA-----------VIASGM 309
                   556666666666666655554444443..33344444333345555555677777779*****************99999...........789999 PP

  Amidohydro_3 358 tpvkellnagvkvalgsD.apvgpfdpwpri.gaavmrktrrggevlrpdeelsleealalyTrgpAkalgledrkGtLevGadADlvvldadpldv 452
                   ++v++ll+agvkv+lg+D + + +++ +  i +aa++++  +   + + +  l+l e+l l T+g+A++lg   + G+ e+G+  D  v+d  p   
    EPX71912.1 310 ANVRRLLDAGVKVSLGTDvSGGYTPNMLIAIrQAALTSRSLAS-VLKDTRIILDLSELLYLATQGGAEVLGRGAEVGSFEEGKNWDALVIDVSPQSN 405
                   ******************7666677777777458899999877.8999999****************************************888888 PP

  Amidohydro_3 453 dppelaear.................vrltvvdGrvv 472
                    p +++e                   + +++v+G+ +
    EPX71912.1 406 SPVDVYEHDswehilskwifngddrnIAQVWVNGKLI 442
                   88877777788999999999999999999**999976 PP

>> A_deaminase  Adenosine/AMP deaminase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   1.1e-05     0.051     218     277 ..     274     327 ..     261     339 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.1e-05
                  ECE-GGGGGSHHHHHHHHHCT-EEEE-HHHHCCCSST-TTTT-CHHHHHHTT-EEEE--B CS
  A_deaminase 218 igHGvrlrkdpvLqyllalaqiplevcPlSNvalgafleyaenPlkeflerglnvslntD 277
                  ++HGv l +d+++   l ++q ++  cP+SN  +   ++     ++++l++g++vsl+tD
   EPX71912.1 274 LAHGVYL-EDEEIETIL-NRQSGISHCPTSNAVI---ASG-MANVRRLLDAGVKVSLGTD 327
                  7899976.566776555.6789*********998...444.4449**************9 PP

>> fn2  Fibronectin type II domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   6.7e-05       0.3      13      37 ..     493     517 ..     491     521 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 6.7e-05
                 SS-B-TTT.SSS-EEESSSBHHHHS CS
         fn2  13 tsCttdgrssgrpWCattsnydkdk 37 
                 t+C++dg+ + +pW  t++nyd +k
  EPX71912.1 493 TQCVNDGKVHAEPWKHTNENYDHKK 517
                 79********************876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (530 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       434  (0.0242066); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.45
# Mc/sec: 3562.33
//
Query:       EPX71913.1  [L=92]
Description: copper chaperone [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.8e-09   35.9   3.8      8e-09   35.4   3.8    1.2  1  CHCH           CHCH domain
     0.0018   18.3   4.4     0.0029   17.6   4.4    1.3  1  CX9C           CHCH-CHCH-like Cx9C, IMS import disulfide rela
     0.0043   16.7   0.2     0.0053   16.5   0.2    1.1  1  NDUF_B7        NADH-ubiquinone oxidoreductase B18 subunit (ND
     0.0044   17.3   4.8     0.0083   16.4   4.8    1.5  1  Pet191_N       Cytochrome c oxidase assembly protein PET191
  ------ inclusion threshold ------
      0.027   14.5   2.0        0.2   11.7   2.4    1.8  1  Cmc1           Cytochrome c oxidase biogenesis protein Cmc1 l
      0.096   13.1   4.5       0.83   10.1   3.0    2.5  3  COX17          Cytochrome C oxidase copper chaperone (COX17)
       0.12   12.7   3.6        3.9    7.8   0.4    2.1  2  UPF0203        Uncharacterised protein family (UPF0203)
       0.74   10.2   4.0        2.8    8.3   4.0    1.9  1  Plasmod_Pvs28  Pvs28 EGF domain


Domain annotation for each model (and alignments):
>> CHCH  CHCH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.4   3.8   3.6e-12     8e-09       1      34 [.      31      64 ..      31      65 .. 0.98

  Alignments for each domain:
  == domain 1  score: 35.4 bits;  conditional E-value: 3.6e-12
                THHHHHHHHHHHHHCTSSTTTTHHHHHHHHHHHC CS
        CHCH  1 CgeefkeylkClkdnsdefskCrkefeafkeCvk 34
                C+  +keyl+C+k+n +++ +Cr + +++ +C++
  EPX71913.1 31 CTNVMKEYLECIKTNRSQQQECRPLAKKYLQCRM 64
                9********************************9 PP

>> CX9C  CHCH-CHCH-like Cx9C, IMS import disulfide relay-system,
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   4.4   1.3e-06    0.0029       7      39 ..      30      62 ..      29      65 .. 0.91

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 1.3e-06
        CX9C  7 yCpkefeaYhkCvssnqswpekCkeqkkeLakC 39
                +C + +++Y  C+  n+s++++C ++ k+  +C
  EPX71913.1 30 ECTNVMKEYLECIKTNRSQQQECRPLAKKYLQC 62
                69999*******************998887777 PP

>> NDUF_B7  NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.2   2.4e-06    0.0053      12      54 ..      23      65 ..      12      68 .. 0.89

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 2.4e-06
     NDUF_B7 12 lplkeRDyCAhlLiplnkCrrenfplpwkCehekhayekCqye 54
                 pl++   C++++ ++ +C + n     +C+    +y +C+++
  EPX71913.1 23 FPLDHFGECTNVMKEYLECIKTNRSQQQECRPLAKKYLQCRMD 65
                68888899********************************876 PP

>> Pet191_N  Cytochrome c oxidase assembly protein PET191
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   4.8   3.7e-06    0.0083      20      57 ..      31      66 ..      26      76 .. 0.83

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 3.7e-06
    Pet191_N 20 CvkkerktpkeClkekaeelpeeCkqlrkayfeCkrgl 57
                C ++  k+  eC+k++ ++ ++eC+ l k+y +C+++ 
  EPX71913.1 31 CTNVM-KEYLECIKTN-RSQQQECRPLAKKYLQCRMDT 66
                55555.66889****9.8999**************975 PP

>> Cmc1  Cytochrome c oxidase biogenesis protein Cmc1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   2.4   8.7e-05       0.2      10      45 ..      28      62 ..      24      66 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 8.7e-05
        Cmc1 10 rkeCaelikalaeChkdrllkvvgkCneekeamkkC 45
                + eC +++k++ eC k    +   +C+ + ++  +C
  EPX71913.1 28 FGECTNVMKEYLECIK-TNRSQQQECRPLAKKYLQC 62
                6799999999999999.6677788999988888888 PP

>> COX17  Cytochrome C oxidase copper chaperone (COX17)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.2    0.0041       9.2      29      43 ..      30      44 ..      23      46 .. 0.86
   2 ?   10.1   3.0   0.00037      0.83      18      45 ..      40      67 ..      31      69 .. 0.83
   3 ?   -1.4   0.0       1.4   3.2e+03      41      47 ..      74      80 ..      72      80 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0041
       COX17 29 kCkelieahkaCmrs 43
                +C+++++++ +C++ 
  EPX71913.1 30 ECTNVMKEYLECIKT 44
                8***********985 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00037
       COX17 18 eCilesgaeeekCkelieahkaCmrslG 45
                eCi ++ +++++C+ l +++ +C  + G
  EPX71913.1 40 ECIKTNRSQQQECRPLAKKYLQCRMDTG 67
                8**99*99999************66665 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 1.4
       COX17 41 mrslGFk 47
                mr+lGF+
  EPX71913.1 74 MRNLGFE 80
                9*****6 PP

>> UPF0203  Uncharacterised protein family (UPF0203)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.4    0.0018       3.9      35      50 ..      30      45 ..      26      50 .. 0.82
   2 ?    6.3   0.4    0.0052        12       2      17 ..      47      62 ..      46      66 .. 0.66

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0018
     UPF0203 35 eCeklwkkYreClkka 50
                eC+++ k+Y eC+k++
  EPX71913.1 30 ECTNVMKEYLECIKTN 45
                7999999999999876 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0052
     UPF0203  2 slspeCtelKeaYdeC 17
                s ++eC +l ++Y +C
  EPX71913.1 47 SQQQECRPLAKKYLQC 62
                4566777777777776 PP

>> Plasmod_Pvs28  Pvs28 EGF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   4.0    0.0012       2.8       1      24 [.      30      51 ..      30      69 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0012
  Plasmod_Pvs28  1 kCslKaCkeneeCkltaqnqnyyk 24
                   +C+++  ke+ eC++t + ++  +
     EPX71913.1 30 ECTNV-MKEYLECIKT-NRSQQQE 51
                   7****.**********.4444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       531  (0.0296168); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 601.24
//
Query:       EPX71914.1  [L=402]
Description: cytoplasmic tyrosine-tRNA ligase Yrs1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.4e-69  232.7   0.0    7.4e-69  232.3   0.0    1.2  1  tRNA-synt_1b  tRNA synthetases class I (W and Y)


Domain annotation for each model (and alignments):
>> tRNA-synt_1b  tRNA synthetases class I (W and Y)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  232.3   0.0   4.1e-73   7.4e-69       2     292 ..      30     325 ..      29     326 .. 0.96

  Alignments for each domain:
  == domain 1  score: 232.3 bits;  conditional E-value: 4.1e-73
                   HHS--EEEEEEETSSS-BGGGHHHHHHHHHHHHTTSEEEEEEEHHHHHTTTTT-SSHHHHHHHHHHHHHHHHHHHHHT.CHTTTEEEEETHHHHTTH CS
  tRNA-synt_1b   2 kerplrvysGidPTgklHlGylvplkklvelqkaghevffliaDlhAiigdpskaeerklrkreevlenaikaqlakg.ldpekaevvlqsewlehl 97 
                   ker+l++y G++PTg++H+Gy+vpl+kl+++++ag++v +l+aD+hA++++++ a+++ +++r++++e ++ka+l+++ +++ek+e++++s+ + ++
    EPX71914.1  30 KERDLSLYFGTAPTGRPHCGYFVPLMKLADFLRAGVHVKVLLADVHAFLDNMK-APMELVQHRVRYYELVVKAILKSVnVPIEKLEFIVGSSFQLKE 125
                   5799*************************************************.****************888886555****************** PP

                   HHHHHHHHHHTTCBHHHHHHHHH.CCHHCSSSC--BHHHHHHHHHHHHHHHHTCHSEEEEEGGGHHHHHHHHHHHHHHHHHSTTSS-EEEEET-BBS CS
  tRNA-synt_1b  98 elaellrdlgklgslnrmlqfks.vkkrleegegislgeftYplLqaaDilllkadlvpgGsDQkqnielgrdlarrfnkkevfkkpegltvplltg 193
                   ++a + ++   +++ ++ +++ + v+k++++ +   l+ + Yp +qa+D+++l++d+++gG DQ+++++l+++l++ +++k    k+++l+ p++++
    EPX71914.1 126 DYALDNFRACAVTTEHDAMRAGAeVVKQVAS-P--LLSSLMYPGMQALDEQYLNVDVQFGGIDQRKIFVLAEKLLPMMGYK----KRSHLMSPMVPS 215
                   *****99999988888888888779999999.5..8********************************************9....************ PP

                   TTSSSBTTCETTC.GC-BTTCCHHHHHHHHHHCHCSTTC..SHHHHHHHHHTHHH.........CHHHHHHHHCCSEEESSHHHHHHHHHCCCCHHH CS
  tRNA-synt_1b 194 ldGekKmSKSagn.saIfLddekesvkkkiqkavtdsde..evekllklktelsn.........elierleavsgkkpkreaeellaeevtklvhgg 278
                   ++G+ KmS Sag  ++I+L+de++ vkkk+++a+++++   ++++l +lk++ ++         ++i+r e+++gk   +++eel++++v++++ ++
    EPX71914.1 216 MTGG-KMSASAGAnAKIDLLDEPNVVKKKVRSAFCEPGVveDNGCLAFLKHVSFPsmkmrgekeFIIDRPEKYGGKIVFTSYEELEKAYVEQTLAPQ 311
                   ****.*******98************************999*************************************99***************** PP

                   HHHHHHHHHHHHHH CS
  tRNA-synt_1b 279 dlkkalaealnell 292
                   dlk++l++++n+ll
    EPX71914.1 312 DLKDGLQASINNLL 325
                   ***********998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (402 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1520  (0.0847788); expected 358.6 (0.02)
Passed bias filter:                      729  (0.0406604); expected 358.6 (0.02)
Passed Vit filter:                        72  (0.00401584); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.30s 00:00:00.87 Elapsed: 00:00:00.45
# Mc/sec: 2707.43
//
Query:       EPX71915.1  [L=923]
Description: inositol hexakisphosphate kinase/inositol pyrophosphate synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   5.4e-123  411.1   2.1     7e-123  410.8   2.1    1.1  1  His_Phos_2  Histidine phosphatase superfamily (branch 2)
    1.8e-36  124.1   0.0    5.2e-36  122.7   0.0    1.9  1  PPIP5K2_N   Diphosphoinositol pentakisphosphate kinase 2 N-te
    3.3e-06   26.8   0.0    6.6e-06   25.8   0.0    1.4  1  RimK        RimK-like ATP-grasp domain


Domain annotation for each model (and alignments):
>> His_Phos_2  Histidine phosphatase superfamily (branch 2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  410.8   2.1  1.2e-126    7e-123       2     383 .]     390     864 ..     389     864 .. 0.98

  Alignments for each domain:
  == domain 1  score: 410.8 bits;  conditional E-value: 1.2e-126
                 EEEEEEEEE--SBB-SHHHHHHHHHHHHHHHH.....................................HHCHHTGCCGGGGT................ CS
  His_Phos_2   2 LksvvvviRHGdRtPkqkvkksvtspiflsllkkhke............................Klkqlktalekkghfpgtyrkv........evek 64 
                 Lks+vvv RH+dRtPkqk+k s+ s+ f++ll++h+e                            Klkql+ ale+k++ pgt+ ++        +  k
  EPX71915.1 390 LKSLVVVLRHADRTPKQKFKFSFSSEPFAKLLQGHTEevilrheqlnsvlaatnvasemkcedlsKLKQLRLALETKKNLPGTKVQLkpayssegNLTK 488
                 99*********************************************************************************************9*** PP

                 .--SSSTTS.B-HHHHHHHHHHHHHHHHHCHTCCHTTSS--TTEEEEEESSHHHHHHHHHHHHHHCHCCC---S-TTSTTGGG-TTTTCCCEEEHHHHC CS
  His_Phos_2  65 lqlilkwggelthaGrkqaeelGrqfrqrYplgLlrlhltykdlkirassegRviaSAaafakGllglegeltdllskdkdllddsnaakdlldeakkk 163
                 lqli+kwgge th++r+q ++lG+qfr++    ++r++l  kd++i++sse+Rv +SA++fa ++l++e + +dll+++kdllddsnaakd++d++kk+
  EPX71915.1 489 LQLIIKWGGEFTHSARYQSKDLGEQFRKDLY-IMNRDCL--KDVEIFTSSERRVSTSAEIFAMAFLEQETIANDLLKVRKDLLDDSNAAKDTMDKVKKH 584
                 ***************************9998.9****99..*****************************999************************** PP

                 CCCHHCTTSHHTCHHHC......HHHTGGHCHHHHCHCCCCCHHHHH......HHCHHH.CTTEEEE-HHHHHHHHHHHHHHHHHHCT-TTGGGCTH.. CS
  His_Phos_2 164 lkelltegaeacpafew......pikvakrvdelvkylkedmdenia......krleql.cpgesnllakerwdklercfyeknkfdiskicdlydemk 249
                 lk+ll+  ++a ++f+w      p++v+++v++l+ky++++++en+       ++++++ c++e + l++erw+kl+ +f++ +k+d+sk+++lyd++k
  EPX71915.1 585 LKSLLRVSDTARKEFTWpenmpkPCEVMQQVVQLMKYHRAILRENFIilgpgaEQVQSRwCCSENPALFRERWEKLFNEFCDSEKADPSKVSELYDTLK 683
                 **************************************************999999998**************************************** PP

                 HCHHHHHH..................................................HHHHHHHHHC.............TTTCCCCHHHHHHHHHHH CS
  His_Phos_2 250 ydalhnry..................................................lkdleelyklakv.....ipqEygigpeeklkiGllllnpl 293
                 ydalhnr+                                                  l++l ely+lakv      pqEygi++eekl+iGll++ pl
  EPX71915.1 684 YDALHNRQfleriftpyqylrfpqdpglttresssssndssnngisnmsksarkterpLEKLYELYDLAKVlfdfvSPQEYGIEQEEKLEIGLLTSVPL 782
                 *************************************************************************************************** PP

                 HHHHCTSSSEECCSCCCECS-SEEEEEE-HHHHHHHHHHC...TTTTTBTTB.SSS.TTT..HCCCS-CT-EEEEEEEEE...TCTTT.EEEEEEEC CS
  His_Phos_2 294 lkkilndlqrtreeatperhvrlrlyfthdshiysllnaL...glpeelagedslaaldrlsaspelpymsqivfelyed...ssekk.fyvrllls 383
                 l+++l+d++ +r    +++h+++r+yft++shiy+lln++   glp++ +++          ++pel+y++qi+fel+e+   s + k f+vr++ls
  EPX71915.1 783 LRQVLDDIKVAR----DSDHASTRMYFTKESHIYTLLNCIlesGLPMKMPRN----------QIPELDYLTQICFELFERtnpSGN-KeFSVRITLS 864
                 ************....9***********************************..........*****************7664334.45*****986 PP

>> PPIP5K2_N  Diphosphoinositol pentakisphosphate kinase 2 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.7   0.0   8.8e-40   5.2e-36       2      90 .]      36     124 ..      35     124 .. 0.99

  Alignments for each domain:
  == domain 1  score: 122.7 bits;  conditional E-value: 8.8e-40
   PPIP5K2_N   2 kvgvcamekkakskpmkeilerlekfeelevvifeeevileepveeWPlcdvlisfyskgfPlekaieYaklrkpflindleaqelllD 90 
                 +vgvcam+ ka+skp ++il+r+ + +e+e ++f++++il+e+ve+WP cd li+fys+gfPleka++Y++lrkpf++nd+  qell+D
  EPX71915.1  36 VVGVCAMDAKARSKPCRNILNRIIAEGEFEAIVFGDNMILDEEVENWPACDYLICFYSNGFPLEKAERYVDLRKPFCVNDVLFQELLWD 124
                 59*************************************************************************************99 PP

>> RimK  RimK-like ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   0.0   1.1e-09   6.6e-06      76     166 ..     247     339 ..     237     358 .. 0.89

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 1.1e-09
                 -EEEEE--SS-SEEEEEEEETTEEEEEEEEE-..-SSS----TTTT-EEEE----HHHHHHHHHHHHHCT-SEEEEEEEEETTEEEEEEEESS CS
        RimK  76 ilvqeyieeaenediRvlvvddevvaalrrvs..keGdFRsnlhrGgvaeklqlseeekelAikaakamelvvaGvDllrakrgllvlEvnss 166
                  +  ++++  + ed+++  v+ +   a  r+s   +G  R n h   +    +lseeek +A k++ a e  v+G Dllr     +v++vn  
  EPX71915.1 247 YIYEQFMNVDNAEDVKIYTVGSHYRHAETRKSpvVDGIVRRNPHGKEIRFITNLSEEEKVMASKISIAFEQPVCGFDLLRVSGRSYVIDVNGW 339
                 57889******************9999988874469********9999999****************************************75 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (923 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       624  (0.0348039); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.71u 0.31s 00:00:01.02 Elapsed: 00:00:00.45
# Mc/sec: 6185.03
//
Query:       EPX71916.1  [L=904]
Description: U3 snoRNP-associated protein Utp21 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.1e-70  236.3   4.8    4.8e-70  235.7   4.8    1.3  1  Utp21          Utp21 specific WD40 associated putative domain
    1.8e-18   66.6   0.2    0.00051   20.3   0.0    7.9  9  ANAPC4_WD40    Anaphase-promoting complex subunit 4 WD40 doma
    5.4e-16   58.7  18.1    4.7e-07   30.4   0.6    9.5 11  WD40           WD domain, G-beta repeat
    1.8e-05   23.7   2.0     0.0059   15.4   0.2    3.6  4  Nucleoporin_N  Nup133 N terminal like
    0.00018   20.6   0.0       0.17   10.8   0.0    3.7  3  Ge1_WD40       WD40 region of Ge1, enhancer of mRNA-decapping
    0.00082   18.1   0.1     0.0066   15.1   0.0    2.2  2  ELYS-bb        beta-propeller of ELYS nucleoporin
     0.0014   17.2   0.1     0.0034   16.0   0.1    1.6  1  Cytochrom_D1   Cytochrome D1 heme domain
     0.0018   17.0   5.6        0.4    9.3   0.1    4.0  5  Nup160         Nucleoporin Nup120/160
     0.0019   17.6   0.7        1.8    7.8   0.4    3.7  4  WD40_like      WD40-like domain
     0.0031   17.4   0.1        6.1    6.7   0.0    3.9  4  eIF2A          Eukaryotic translation initiation factor eIF2A
  ------ inclusion threshold ------
      0.088   12.5   0.1         44    3.7   0.1    3.9  4  Hira           TUP1-like enhancer of split


Domain annotation for each model (and alignments):
>> Utp21  Utp21 specific WD40 associated putative domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  235.7   4.8     3e-73   4.8e-70       5     233 .]     684     903 ..     680     903 .. 0.87

  Alignments for each domain:
  == domain 1  score: 235.7 bits;  conditional E-value: 3e-73
                 XXXXX..XX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXX-HHHHHHHHTT---- CS
       Utp21   5 eeeeeeeedadvkspsseqlsedLiTLSlvpksrwqtLlnLDlIKeRnkPkeapkkpekaPFFLptlaglegkfasekedeeseedeeeeeeeesrilk 103
                 ee+eeee+d  ++++  +q++++L TLS++p+++wqtL+n++lIK+Rn Pkeapk+pekaPFFLp+l+++++   s+   +e+++d++    ++ ++++
  EPX71916.1 684 EEDEEEEDDILYTTA--DQIDNQLQTLSKLPRTQWQTLVNMELIKARNAPKEAPKAPEKAPFFLPSLKEQSEGLVSK--LDETNNDKQ----SRPNLAS 774
                 455555556555555..****************************************************99987776..333333333....3334444 PP

                 --.------HHHHHHHHHHSS--HHHHHHHHH-S-HHHHHT--------S-SHHHHHHHHHHHHHTTTS-HHHHHHHHHHHHHHTTTTTTT-SH..... CS
       Utp21 104 ldklgteseftklLeegsetgdysefleyLkslspsaidleirsLesaesleelvafvkaltarLksrrdfeLvqailsvfLkvHgdviaeeeee.... 198
                 +  ++ +++f++lL++g++    ++f+eyLk+l+p+++dleirsLe+++++ee++ f++ +t+rL srrdfeLvqa+++vf+k+H+dv+ ++e +    
  EPX71916.1 775 S-MQNLTTRFSELLHAGDD----DAFFEYLKTLPPAKTDLEIRSLEAFPPYEEFILFINSMTSRLASRRDFELVQAYMAVFIKAHEDVLLSSEASneke 868
                 3.25578********9766....79****************************************************************9998878889 PP

                 .HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT CS
       Utp21 199 elkealeelkeeqeeewerldelvkyclgvvgflr 233
                 ++ +al+++ ++q+ee++rl +l++yc+gv++f+r
  EPX71916.1 869 NVLNALKAWGTVQKEENNRLLDLIHYCSGVLSFMR 903
                 *********************************97 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0     0.093   1.5e+02      53      87 ..     176     210 ..     160     213 .. 0.89
   2 !    9.6   0.0    0.0007       1.1      27      78 ..     194     244 ..     175     254 .. 0.82
   3 !   12.5   0.0   8.5e-05      0.14       5      75 ..     214     283 ..     210     299 .. 0.84
   4 ?    5.5   0.0     0.013        21       9      69 ..     260     322 ..     255     345 .. 0.85
   5 ?    0.2   0.0       0.6   9.7e+02      51      76 ..     349     374 ..     339     388 .. 0.75
   6 !    6.3   0.0    0.0073        12      27      81 ..     436     487 ..     411     489 .. 0.81
   7 !   13.0   0.0     6e-05     0.097      34      85 ..     485     534 ..     479     541 .. 0.89
   8 !   10.6   0.0   0.00033      0.54      38      76 ..     530     568 ..     525     574 .. 0.90
   9 !   20.3   0.0   3.1e-07   0.00051       3      81 ..     538     615 ..     536     624 .. 0.91

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.093
  ANAPC4_WD40  53 Lavaysdgevrlldaesgkvvhslsvksekavtcl 87 
                  +  ++sdg+ +l ++ ++k+v +++    +a+t+l
   EPX71916.1 176 IILGFSDGSFELWNMRTAKCVYKFKNLVGDAITSL 210
                  56799*******************99888888877 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.0007
  ANAPC4_WD40  27 qrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsv 78 
                  + v+++ ++  +  ++sL   p   +La++++ g++ l++  ++++v +++ 
   EPX71916.1 194 KCVYKF-KNLVGDAITSLTQAPVLDILAIGTAGGRIVLYNLRNATIVMEFRQ 244
                  557777.667788999*******************************99876 PP

  == domain 3  score: 12.5 bits;  conditional E-value: 8.5e-05
  ANAPC4_WD40   5 ptmDLiAlatedgellvfRl.ngqrvwtleedkedsevrsLaWkpdgk.lLavaysdgevrlldaesgkvvhs 75 
                  p  D++A++t+ g+++++ l n   v+++    ++++v s +++ dg  +La + ++g v+l+d ++ +v + 
   EPX71916.1 214 PVLDILAIGTAGGRIVLYNLrNATIVMEF---RQSGRVLSSSFRTDGVpILATSNHQGDVSLFDLSKRRVQNV 283
                  788****************9777888888...9999***********5499*************999887655 PP

  == domain 4  score: 5.5 bits;  conditional E-value: 0.013
  ANAPC4_WD40   9 LiAlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevr..lldaes 69 
                  ++A  +++g++ +f l+ +rv ++   ++ + + +L++ +   +L+ a  d++++  ++d+ +
   EPX71916.1 260 ILATSNHQGDVSLFDLSKRRVQNVVYGAHHGPIPKLQFLNGQPVLVTAGPDNSLKewIFDSMD 322
                  689999******************999*********************999988644556555 PP

  == domain 5  score: 0.2 bits;  conditional E-value: 0.6
  ANAPC4_WD40  51 klLavaysdgevrlldaesgkvvhsl 76 
                  ++L  a sd+++r +++ + +   +l
   EPX71916.1 349 HFLLSAASDNTLRAISVFQDNQTVEL 374
                  8999*********9999766554444 PP

  == domain 6  score: 6.3 bits;  conditional E-value: 0.0073
  ANAPC4_WD40  27 qrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  q+v     ++++  vr+++ +  g++ +v+ s+g v++++++sg + +s+  k++
   EPX71916.1 436 QHVL---PTTDGTPVRAVCVSCCGNFGMVGSSKGLVNVYNMQSGILRKSFGHKQH 487
                  3333...448999*******************************99998877665 PP

  == domain 7  score: 13.0 bits;  conditional E-value: 6e-05
  ANAPC4_WD40  34 edkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavt 85 
                  ++++++ ++s++  + +++L+v+  dg++r+ d ++g ++ +++++s+  +t
   EPX71916.1 485 KQHSNKPITSIMLDNVNRVLVVSSLDGTLRFWDFNKGSLIDTIDMGSS--IT 534
                  6778999************************************99987..55 PP

  == domain 8  score: 10.6 bits;  conditional E-value: 0.00033
  ANAPC4_WD40  38 dsevrsLaWkpdgklLavaysdgevrlldaesgkvvhsl 76 
                  +s+++s  +++   l+av ++d  +r++d+++ kvv++l
   EPX71916.1 530 GSSITSAVYHHASDLIAVICDDFGIRIVDVQTRKVVREL 568
                  7899999****************************9986 PP

  == domain 9  score: 20.3 bits;  conditional E-value: 3.1e-07
  ANAPC4_WD40   3 wcptmDLiAlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  +    DLiA++ +d  +++  ++ ++v+     +++++ +++ +++dg+ L+ a  dg++r  d  +g+++ ++++++ 
   EPX71916.1 538 YHHASDLIAVICDDFGIRIVDVQTRKVVRE-LWGHSNRLTDIDFSNDGRWLVTASLDGTIRTWDLPTGHLIDAITTGNV 615
                  56678*******************999988.689999***********************************9998765 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       9.9   1.6e+04      13      29 ..      79      93 ..      71      97 .. 0.68
   2 ?    0.4   0.0      0.87   1.4e+03      19      38 .]     122     141 ..     110     141 .. 0.77
   3 ?    1.5   0.0       0.4   6.6e+02      24      38 .]     173     189 ..     151     189 .. 0.67
   4 ?   -2.2   0.0       5.7   9.2e+03      13      38 .]     207     232 ..     194     232 .. 0.64
   5 ?   -0.1   0.0       1.2     2e+03       7      37 ..     285     316 ..     280     316 .. 0.82
   6 ?    2.6   0.0      0.17   2.8e+02       9      35 ..     333     361 ..     326     362 .. 0.59
   7 ?    2.7   0.0      0.16   2.7e+02       5      38 .]     437     472 ..     430     472 .. 0.73
   8 !   13.3   0.1   7.1e-05      0.12       9      38 .]     483     517 ..     476     517 .. 0.70
   9 ?   -1.5   0.4       3.4   5.5e+03      12      36 ..     532     556 ..     525     558 .. 0.77
  10 !   30.4   0.6   2.9e-10   4.7e-07       2      38 .]     563     600 ..     562     600 .. 0.91
  11 !    8.7   0.1    0.0021       3.4      12      32 ..     609     635 ..     602     636 .. 0.74

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 9.9
                EEEEEEETTSSEEEEEE CS
        WD40 13 vtslafspdgawlasGs 29
                +++l   ++++++++Gs
  EPX71916.1 79 ISCL--KSYKDFMLAGS 93
                7788..67778877776 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.87
                 ETTSSEEE.EEETTSEEEEEE CS
        WD40  19 spdgawla.sGsdDgtvriWd 38 
                 +  g w++ ++s  + v+iW+
  EPX71916.1 122 DAFGEWIIaTSS-RRLVHIWK 141
                 667999862556.999***95 PP

  == domain 3  score: 1.5 bits;  conditional E-value: 0.4
                 E...EEEE.ETTSEEEEEE CS
        WD40  24 w...lasG.sdDgtvriWd 38 
                 +   ++ G s Dg+  +W+
  EPX71916.1 173 LnkiIL-GfS-DGSFELWN 189
                 344366.955.*******8 PP

  == domain 4  score: -2.2 bits;  conditional E-value: 5.7
                 EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  13 vtslafspdgawlasGsdDgtvriWd 38 
                 +tsl   p  + la G+  g + +++
  EPX71916.1 207 ITSLTQAPVLDILAIGTAGGRIVLYN 232
                 66666666666699898788888776 PP

  == domain 5  score: -0.1 bits;  conditional E-value: 1.2
                 EESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   7 ltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 + +H +++  l+f   ++ l++++ D++++ W
  EPX71916.1 285 YGAHhGPIPKLQFLNGQPVLVTAGPDNSLKEW 316
                 7788788888888888899****999999866 PP

  == domain 6  score: 2.6 bits;  conditional E-value: 0.17
                 SS.SSEEEEEEETTSSE..EEEEETTSEEE CS
        WD40   9 GH.ssvtslafspdgaw..lasGsdDgtvr 35 
                 GH  + ++++f   +    l+++s D+t+r
  EPX71916.1 333 GHyEPPSCIKFYGQSVHflLSAAS-DNTLR 361
                 666555666544444443244557.***98 PP

  == domain 7  score: 2.7 bits;  conditional E-value: 0.16
                 EEEESS..SSEEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40   5 rtltGH..ssvtslafspdgaw.lasGsdDgtvriWd 38 
                 ++l +   ++v+++++s  g++ ++ Gs +g v +++
  EPX71916.1 437 HVLPTTdgTPVRAVCVSCCGNFgMV-GSSKGLVNVYN 472
                 4444343335************765.87799999987 PP

  == domain 8  score: 13.3 bits;  conditional E-value: 7.1e-05
                 SS.SS....EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   9 GH.ss....vtslafspdgawlasGsdDgtvriWd 38 
                 GH ++    +ts+  +  ++ l+ +s Dgt+r+Wd
  EPX71916.1 483 GHkQHsnkpITSIMLDNVNRVLVVSSLDGTLRFWD 517
                 454223456888876666666888899*******9 PP

  == domain 9  score: -1.5 bits;  conditional E-value: 3.4
                 SEEEEEEETTSSEEE.EEETTSEEEE CS
        WD40  12 svtslafspdgawla.sGsdDgtvri 36 
                 s+ts  +++ ++++a  ++ D  +ri
  EPX71916.1 532 SITSAVYHHASDLIAvICD-DFGIRI 556
                 6888889999999863566.999998 PP

  == domain 10  score: 30.4 bits;  conditional E-value: 2.9e-10
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 + +r+l GH +  t+++fs dg+wl+++s Dgt+r Wd
  EPX71916.1 563 KVVRELWGHsNRLTDIDFSNDGRWLVTASLDGTIRTWD 600
                 5678888**777*************************9 PP

  == domain 11  score: 8.7 bits;  conditional E-value: 0.0021
                 S.....E.EEEEEETTSSEEEEEETTS CS
        WD40  12 s.....v.tslafspdgawlasGsdDg 32 
                       v t+l+f p g++la+++ D+
  EPX71916.1 609 AittgnVcTGLSFGPTGDYLATSHVDQ 635
                 334445779**************9986 PP

>> Nucleoporin_N  Nup133 N terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0      0.82   1.3e+03     204     230 ..     106     142 ..      88     171 .. 0.75
   2 ?   -0.7   0.0      0.27   4.4e+02     202     252 ..     205     251 ..     165     267 .. 0.76
   3 !   15.4   0.2   3.6e-06    0.0059     188     274 ..     474     560 ..     451     563 .. 0.77
   4 !    4.9   0.0    0.0055       8.9     202     231 ..     573     602 ..     561     611 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.82
                    EEEEEEECCT..........CEEEEEETTSEEEEEEE CS
  Nucleoporin_N 204 ivqlridssr..........rilytlsskgvirvydl 230
                    i++++ +ss           +++++ ss++ +++++ 
     EPX71916.1 106 IWEIELESSAgevvqldafgEWIIATSSRRLVHIWKH 142
                    5677777777777777777899999999999999984 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.27
                    G-EEEEEEECCTCEEEEEETTSEEEEEEEETTCEE-EEEEEEEHHHHHHHH CS
  Nucleoporin_N 202 eeivqlridssrrilytlsskgvirvydlsasngesslksdidirqillea 252
                    ++i++l+  +   il + +++g+i  y+l     + +++ ++ ++ ++l++
     EPX71916.1 205 DAITSLTQAPVLDILAIGTAGGRIVLYNLR----NATIVMEFRQSGRVLSS 251
                    789999999999999999999999999999....55666666666555544 PP

  == domain 3  score: 15.4 bits;  conditional E-value: 3.6e-06
                    ..--SSS--G.----GG-EEEEEEECCTCEEEEEETTSEEEEEEEETTCEE-EEEEEEEHHHHHHHH...HHSCHTTTCGCTTT-EEEEEE CS
  Nucleoporin_N 188 l.silpgvls.gasereeivqlridssrrilytlsskgvirvydlsasngesslksdidirqillea..itesliasaplaskslkildis 274
                    + +il++ ++  ++++++i+++  d+  r l++ s +g++r++d++    + sl  +id+ +++ +a  +++s+  + +  + +++i+d++
     EPX71916.1 474 QsGILRKSFGhKQHSNKPITSIMLDNVNRVLVVSSLDGTLRFWDFN----KGSLIDTIDMGSSITSAvyHHASDLIAVICDDFGIRIVDVQ 560
                    1355666555899*******************************99....77899999999999998765555555557777777777776 PP

  == domain 4  score: 4.9 bits;  conditional E-value: 0.0055
                    G-EEEEEEECCTCEEEEEETTSEEEEEEEE CS
  Nucleoporin_N 202 eeivqlridssrrilytlsskgvirvydls 231
                    ++++ +  ++  r+l+t+s +g+ir++dl 
     EPX71916.1 573 NRLTDIDFSNDGRWLVTASLDGTIRTWDLP 602
                    556666666777****************86 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.014        23     155     216 ..     213     275 ..      97     283 .. 0.86
   2 ?    0.6   0.0      0.14   2.2e+02     185     216 ..     485     518 ..     454     522 .. 0.71
   3 !   10.8   0.0    0.0001      0.17     162     215 ..     547     600 ..     537     605 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.014
    Ge1_WD40 155 aeiwsvdmiaskygsgelsveeieegllkieehsliveaafspdGt.alatasedGevkffqv 216
                 a + ++ +i +  g++ l + ++ + ++++++   + +++f +dG   lat+ + G v +f +
  EPX71916.1 213 APVLDILAIGTAGGRIVLYNLRNATIVMEFRQSGRVLSSSFRTDGVpILATSNHQGDVSLFDL 275
                 555555555555666666666677778899999999*********7468999999*9999976 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.14
    Ge1_WD40 185 eehs..liveaafspdGtalatasedGevkffqv 216
                 ++hs   i++ ++     +l ++s dG+++f+  
  EPX71916.1 485 KQHSnkPITSIMLDNVNRVLVVSSLDGTLRFWDF 518
                 444422477777777788999999*****99975 PP

  == domain 3  score: 10.8 bits;  conditional E-value: 0.0001
    Ge1_WD40 162 miaskygsgelsveeieegllkieehs.liveaafspdGtalatasedGevkffq 215
                 +i  ++g+  ++v+ +++++ ++  hs  +++  fs dG  l tas dG+++ + 
  EPX71916.1 547 VICDDFGIRIVDVQ-TRKVVRELWGHSnRLTDIDFSNDGRWLVTASLDGTIRTWD 600
                 55666666655554.44566678888769***********************986 PP

>> ELYS-bb  beta-propeller of ELYS nucleoporin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   4.1e-06    0.0066     220     257 ..     160     198 ..     110     211 .. 0.74
   2 ?   -0.1   0.0      0.16   2.7e+02     218     256 ..     442     482 ..     425     501 .. 0.74

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 4.1e-06
     ELYS-bb 220 gvavsalsy.isrtnqlavgfsdgylslwnlktlkkeyh 257
                    v+a+ +  +  n++++gfsdg ++lwn++t k  y+
  EPX71916.1 160 NADVTAMIHpSTYLNKIILGFSDGSFELWNMRTAKCVYK 198
                 334555544134579******************998886 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.16
     ELYS-bb 218 psgvavsalsyisrtnqlavgfsdgylslwnlkt..lkkey 256
                   g+ v a++     n   vg s g ++++n+++  l+k +
  EPX71916.1 442 TDGTPVRAVCVSCCGNFGMVGSSKGLVNVYNMQSgiLRKSF 482
                 44899999999999999***************975455554 PP

>> Cytochrom_D1  Cytochrome D1 heme domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.1   2.1e-06    0.0034       5     124 ..     543     659 ..     539     681 .. 0.86

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 2.1e-06
                   GEEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT.SSEEEEEETTSEEEEEESSSSSEEEEEE-SSEEEEEEE--TTSEEEEEEEETTEE CS
  Cytochrom_D1   5 nlfvvverdagkvalldgdskeilavletgyalHisrvfasdgRyvyvigRDgkvtliDLwakeivaevkiGlnarsvavSqddryvivgnYlPgql 101
                   +l +v+  d+  ++++d ++ + +  l ++ +  +   f++dgR++ +++ Dg++   DL + + +  +  G    ++     + y++++      +
    EPX71916.1 543 DLIAVIC-DDFGIRIVDVQTRKVVRELWGHSNRLTDIDFSNDGRWLVTASLDGTIRTWDLPTGHLIDAITTGNVCTGLSFGPTGDYLATSHVDQ--I 636
                   6777765.5667*************************************************************999999999999999887654..4 PP

                   EEEETTT--EEEEEE--EE-SSS CS
  Cytochrom_D1 102 vildaetLelvkvisargltvde 124
                    i    +L++ k++s++ l  d+
    EPX71916.1 637 GISLWTNLSMFKHVSTKSLRLDD 659
                   44445789999999998888776 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.46   7.4e+02     238     256 ..     181     200 ..     156     211 .. 0.78
   2 ?   -1.3   0.1      0.38   6.2e+02     297     343 ..     353     399 ..     338     437 .. 0.56
   3 !    9.3   0.1   0.00025       0.4     224     258 ..     494     529 ..     460     536 .. 0.77
   4 ?   -0.6   0.0      0.24   3.9e+02     220     254 ..     532     566 ..     529     582 .. 0.82
   5 !    6.8   0.0    0.0013       2.2     224     257 ..     579     611 ..     571     620 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.46
                 TT-EEEEEETTTTEEEEE.E CS
      Nup160 238 rdgkLrvWnlltgkclat.i 256
                 +dg   +Wn +t+kc++  +
  EPX71916.1 181 SDGSFELWNMRTAKCVYKfK 200
                 47777899999999999844 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.38
                 --GGG-EEEEEEEEEEE-...SSSEEEEES-S------S-TT--EEE CS
      Nup160 297 spssggefkvwkvkkedtsvslglvdlfleqtivpadpdssnvweLr 343
                 s+ s+++   + v+++++ v+l+ ++++++++++   pd+ ++ e++
  EPX71916.1 353 SAASDNTLRAISVFQDNQTVELSQGSVTSKAKKLNVRPDELKLPEII 399
                 55666666666666666666666666666665554444444433443 PP

  == domain 3  score: 9.3 bits;  conditional E-value: 0.00025
                 ......TTTEEEEEETT-EEEEEETTTTEEEEEEE- CS
      Nup160 224 avvei.gqtylfalsrdgkLrvWnlltgkclatidl 258
                 ++     + +l++ s+dg+Lr W+ + g+++ tid+
  EPX71916.1 494 SIMLDnVNRVLVVSSLDGTLRFWDFNKGSLIDTIDM 529
                 333223567889999*******************98 PP

  == domain 4  score: -0.6 bits;  conditional E-value: 0.24
                 EEET.....TTTEEEEEETT-EEEEEETTTTEEEE CS
      Nup160 220 dvavavveigqtylfalsrdgkLrvWnlltgkcla 254
                 + ++av + +++++++++ d  +r+ +++t k+++
  EPX71916.1 532 SITSAVYHHASDLIAVICDDFGIRIVDVQTRKVVR 566
                 45667777799999999999999999999999887 PP

  == domain 5  score: 6.8 bits;  conditional E-value: 0.0013
                 .....TTTEEEEEETT-EEEEEETTTTEEEEEEE CS
      Nup160 224 avveigqtylfalsrdgkLrvWnlltgkclatid 257
                 ++++ +   l+++s+dg++r W+l tg ++  i+
  EPX71916.1 579 DFSN-DGRWLVTASLDGTIRTWDLPTGHLIDAIT 611
                 5555.77789****************99887665 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0     0.089   1.4e+02     158     198 ..      76     114 ..      41     124 .. 0.72
   2 ?    2.2   0.0     0.057        93      55     113 ..     175     235 ..     164     252 .. 0.69
   3 !    7.8   0.4    0.0011       1.8       3      90 ..     447     538 ..     445     583 .. 0.81
   4 ?    0.4   0.0      0.19   3.2e+02      12      77 ..     542     608 ..     538     616 .. 0.76

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.089
   WD40_like 158 vkdiktfeiienkdilligtegeililkknvilqkidvegk 198
                  ++i+++++   kd +l g  +++  +k+ +i+ +i++e++
  EPX71916.1  76 EREISCLKSY--KDFMLAGSGSKVFAYKRGKIIWEIELESS 114
                 3567777776..99999999999999999999999999886 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.057
   WD40_like  55 lilvvtlDGtillslleneeevenek..ieedistvkv..iddklliGtnkGsiyvfskdlql 113
                 +i+ +  DG + l  ++  + v + k  + ++i+  +   + d l+iGt  G i +++    +
  EPX71916.1 175 KIILGFSDGSFELWNMRTAKCVYKFKnlVGDAITSLTQapVLDILAIGTAGGRIVLYNLR--N 235
                 566667788888888888885554332266778776652246889999999999999876..3 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.0011
   WD40_like   3 iYsidiskkgslilyGgkddkctvlkleslesvsivesfedS..vifvkllddd..lilvvtlDGtillslleneeevenekieedistvkv 90 
                 + ++ +s  g++ ++G+ +  + v++++s+++  ++ + + S   i + +ld+   +++v +lDGt+   +++++  +++ ++   i+ + +
  EPX71916.1 447 VRAVCVSCCGNFGMVGSSKGLVNVYNMQSGILRKSFGHKQHSnkPITSIMLDNVnrVLVVSSLDGTLRFWDFNKGSLIDTIDMGSSITSAVY 538
                 55677788888999999999999999999999998865555511677888887555888899********************9999987654 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.19
   WD40_like  12 gslilyGgkddkctvlkleslesvsivesfedSvifvklldddlilv.vtlDGtillslleneeeve 77 
                 ++li++  +d  ++++++++ ++v  + + ++ +  + + +d   lv ++lDGti + +l  ++ ++
  EPX71916.1 542 SDLIAVICDDFGIRIVDVQTRKVVRELWGHSNRLTDIDFSNDGRWLVtASLDGTIRTWDLPTGHLID 608
                 566777777777888888888888888888888888888888766653799****999888777665 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0      0.15   2.4e+02      76     147 ..     176     248 ..     168     282 .. 0.74
   2 ?    0.2   0.0      0.35   5.7e+02     101     143 ..     490     529 ..     456     547 .. 0.67
   3 !    6.7   0.0    0.0037       6.1     127     163 ..     554     592 ..     553     598 .. 0.82
   4 ?    3.7   0.0      0.03        50     122     161 ..     591     631 ..     590     635 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.15
                 EEESSSSCEEEEEECS.CEEEEEEEEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-TT-- CS
       eIF2A  76 viyGkmpakvslfdlk.vkviskleeqkrNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakaeaanat 147
                 +i G+++ + +l++++ +k ++k+++    +i    +  ++ +  +g   G++ +++  + + + +++++  +
  EPX71916.1 176 IILGFSDGSFELWNMRtAKCVYKFKNLVGDAITSLTQAPVLDILAIGTAGGRIVLYNLRNATIVMEFRQSGRV 248
                 6778888888888886577788888888888888888888878888888888888888888877777766544 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.35
                 ES--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE- CS
       eIF2A 101 qkrNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakaea 143
                 ++  +i+ ++ +++++++   +l G+l +wd +k + i +++ 
  EPX71916.1 490 KPITSIMLDNVNRVLVVS---SLDGTLRFWDFNKGSLIDTIDM 529
                 344456666666666665...67899*****999988888765 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.0037
                 EEEEETTTTEEEEEE..E-TT--EEEE-TTSSEEEEEE- CS
       eIF2A 127 leiwdvkkkkkiaka..eaanatlvewspdgryvlTatt 163
                 + i+dv+++k + ++  ++   t++++s+dgr+++Ta+ 
  EPX71916.1 554 IRIVDVQTRKVVRELwgHSNRLTDIDFSNDGRWLVTASL 592
                 67889999999988643567789**************86 PP

  == domain 4  score: 3.7 bits;  conditional E-value: 0.03
                 SSS-EEEEEETTTTEEEEEEE-.TT--EEEE-TTSSEEEEE CS
       eIF2A 122 nlaGeleiwdvkkkkkiakaea.anatlvewspdgryvlTa 161
                 +l G++  wd  + + i  +     +t + + p+g+y++T+
  EPX71916.1 591 SLDGTIRTWDLPTGHLIDAITTgNVCTGLSFGPTGDYLATS 631
                 589*********99999887652679*************98 PP

>> Hira  TUP1-like enhancer of split
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.034        56      29      91 ..     181     268 ..     174     277 .. 0.77
   2 ?    3.7   0.1     0.027        44      12      40 ..     447     475 ..     435     507 .. 0.76
   3 ?   -0.8   0.0      0.65   1.1e+03      21      43 ..     501     523 ..     487     562 .. 0.70
   4 ?   -2.3   0.0       1.9   3.1e+03      21      41 ..     584     604 ..     577     607 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.034
        Hira  29 svgllyvWnvkkkkvllppvslapllssssrsseke............................ltrapavtsasltsnGvpivtlsngdg 91 
                 s+g++  Wn+++ k++    ++++l+ ++ +s ++                               ++ +v s s+++ Gvpi+  sn +g
  EPX71916.1 181 SDGSFELWNMRTAKCVY---KFKNLVGDAITSLTQApvldilaigtaggrivlynlrnativmeFRQSGRVLSSSFRTDGVPILATSNHQG 268
                 67888899999999998...78888888777776667777778877777788877777777777677777888888888888888888765 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.027
        Hira  12 spasfLessgsyLlavtsvgllyvWnvkk 40 
                  +a+ ++++g++ ++ +s+gl+ v+n+++
  EPX71916.1 447 VRAVCVSCCGNFGMVGSSKGLVNVYNMQS 475
                 67999*********************964 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 0.65
        Hira  21 gsyLlavtsvgllyvWnvkkkkv 43 
                 + +L++ + +g+l  W+ +k ++
  EPX71916.1 501 NRVLVVSSLDGTLRFWDFNKGSL 523
                 4555556669*******966554 PP

  == domain 4  score: -2.3 bits;  conditional E-value: 1.9
        Hira  21 gsyLlavtsvgllyvWnvkkk 41 
                 g +L+  + +g++  W++ + 
  EPX71916.1 584 GRWLVTASLDGTIRTWDLPTG 604
                 589999999********9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (904 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       569  (0.0317363); expected 358.6 (0.02)
Passed bias filter:                      480  (0.0267723); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.82u 0.32s 00:00:01.13 Elapsed: 00:00:00.51
# Mc/sec: 5359.78
//
Query:       EPX71917.1  [L=284]
Description: transcription factor TFIIE beta subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.2e-21   75.9   1.0    4.4e-21   74.9   1.0    1.5  1  TFIIE_beta     TFIIE beta subunit core domain
    1.3e-20   72.8   0.4      4e-20   71.3   0.0    2.0  2  TFA2_Winged_2  TFA2 Winged helix domain 2
  ------ inclusion threshold ------
       0.31   11.3   1.7        5.8    7.2   0.1    2.4  2  DUF4148        Domain of unknown function (DUF4148)


Domain annotation for each model (and alignments):
>> TFIIE_beta  TFIIE beta subunit core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.9   1.0   7.3e-25   4.4e-21       3      68 .]      80     140 ..      78     140 .. 0.97

  Alignments for each domain:
  == domain 1  score: 74.9 bits;  conditional E-value: 7.3e-25
  TFIIE_beta   3 tqLakiveylKkkdgplsleeIlsylslqldlsdknwllleaLknnpkieyDpkkgkfsfkPlyni 68 
                 +qL+++veylK+++ p++ eeI+syls+  +l+     ll++Lk+n++i+yD+++++f+fkPl+ni
  EPX71917.1  80 SQLHYAVEYLKERNDPKTAEEIASYLST--PLTP---MLLKLLKKNERIYYDERTETFAFKPLHNI 140
                 8**************************9..9988...9***************************9 PP

>> TFA2_Winged_2  TFA2 Winged helix domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1      0.45   2.7e+03       6      14 ..     113     121 ..     112     131 .. 0.81
   2 !   71.3   0.0   6.7e-24     4e-20       2      61 .]     142     201 ..     141     201 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.45
  TFA2_Winged_2   6 LlalLkkrp 14 
                    Ll+lLkk++
     EPX71917.1 113 LLKLLKKNE 121
                    899999985 PP

  == domain 2  score: 71.3 bits;  conditional E-value: 6.7e-24
  TFA2_Winged_2   2 nkeeLlalLkkrpkaeGikvkdLkdswpdveealeeLeaegeilvlrtkkdgqpkiVfwN 61 
                    ++  Lla+L ++++  G+++k+L+d+wp+v+ +leeLe++ge+l+lrt kdg p++V+ N
     EPX71917.1 142 SAPGLLAYLDSQKTHTGMSIKELRDGWPNVVAELEELEKQGEVLLLRTRKDGIPRMVWRN 201
                    5667******************************************************98 PP

>> DUF4148  Domain of unknown function (DUF4148)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.1   0.00098       5.8      33      44 ..     171     182 ..     170     193 .. 0.83
   2 ?    2.8   0.1     0.022   1.3e+02      15      30 ..     252     264 ..     245     267 .. 0.74

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.00098
     DUF4148  33 VraELaqaeaaG 44 
                 V aEL+++e++G
  EPX71917.1 171 VVAELEELEKQG 182
                 99********** PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.022
     DUF4148  15 aaaaalaahskspkTR 30 
                 a+aa   +++k pkTR
  EPX71917.1 252 ASAA---QKQKKPKTR 264
                 2222...78******* PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (284 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       542  (0.0302304); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 1917.49
//
Query:       EPX71918.1  [L=514]
Description: triglyceride lipase-cholesterol esterase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.4e-25   90.4   0.4    3.3e-25   89.2   0.4    1.6  1  Abhydrolase_1   alpha/beta hydrolase fold
    8.7e-20   70.1   0.0    1.6e-19   69.2   0.0    1.5  1  Abhydro_lipase  Partial alpha/beta-hydrolase lipase region
    7.6e-07   28.6   0.0    0.00055   19.3   0.0    2.3  2  Hydrolase_4     Serine aminopeptidase, S33
    0.00016   21.4   1.7       0.19   11.4   0.0    2.7  3  FSH1            Serine hydrolase (FSH1)
  ------ inclusion threshold ------
      0.026   14.2   0.2      0.054   13.1   0.0    1.6  2  Esterase        Putative esterase


Domain annotation for each model (and alignments):
>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.2   0.4   9.2e-29   3.3e-25       1     256 [.     124     418 ..     124     419 .. 0.87

  Alignments for each domain:
  == domain 1  score: 89.2 bits;  conditional E-value: 9.2e-29
                    SEEEEE-STTTCGGGGTT.....GHHHHHHHHTTSEEEEEEETTSTTSSSTTTGB............CHHSHHHHHHHHHHHHHHCTTSSEEEEEE CS
  Abhydrolase_1   1 pvlvilhGlpgssdvwae.....rglapaLakdgfdvillDlrGvgySspapacin...........ddygtasvaddldrildalgddkltlvGh 80 
                    pv+ ++hGl+++s+vwa+     + l++ L ++g+dv+l + rG+ yS+ +++  +           dd+   ++ d +d+il+   +++lt++G+
     EPX71918.1 124 PVIYCHHGLLMNSEVWACnidpeNCLIYQLVDEGYDVWLGNNRGNKYSRQHLRF-DstdndfwnfsiDDFAHYDIPDTIDYILQTSEQKQLTYIGF 218
                    799**********99666111115688888888*******************84.45999************************************ PP

                    THHHHHHHHHHHHH...GGGEEEEEEESE.CSSCCHHHHHHHHHHHHHHCHHCHHHHHHHHHHHHHHHHCCS.CHHHHHHHHHHHHHHHCHHHCCH CS
  Abhydrolase_1  81 SmGGmialayaaey...perVkalvllga.idpaaslieaqrqqaksfpdffdgyaadcarnpagplladel.aaleqrhrlvdalkfpdkskrfp 171
                    S+G+++a+a+++     +e+V+++++l++ ++p   +++  +  +k  p  +   +  +   p++ ++++ l  +l+ r    + l  ++++++++
     EPX71918.1 219 SQGSAQAFAALSVQpllNEKVNCFIALAPaMSPGGLHNQIVDAFVKARPSVLFFLFGRKSILPSAGFWQSILpSTLFNRVLSFFLL--QLFNWSCD 312
                    *****************************999999999999999999999888888888877777777776525566666666777..99999999 PP

                    HHHHHH.....CHHHHHHHHHHHHHHHHCCHHHHHHHHHC..................THHHHSEEEEEEETTCSSSCHHHHHHHHHCHTSEEEEE CS
  Abhydrolase_1 172 ssgsdn.....asslatgalksieqwpttdsaklllrlre..................lknvlaptlvisgtsDplvppkaledlaqllpkkrlvv 244
                    + ++ +     a+  +++++k++ +w +  + + ++++++                   kn+  p+l+++g+ D lv+   +  l++l p ++ ++
     EPX71918.1 313 TISPLQrhasfAHLYSYTSVKCLVHWFQIMRCAEFRMYDNdqiahgyfskhyraarfpTKNIRTPILLFWGELDSLVD--IQPMLNSLPPMAEQIR 406
                    98888722222457899************************************************************7..56666667899***** PP

                    EETCSSSHHHHS CS
  Abhydrolase_1 245 isdagHlafleg 256
                    i++++Hl+ ++ 
     EPX71918.1 407 IPGYEHLDMIWA 418
                    *******99986 PP

>> Abhydro_lipase  Partial alpha/beta-hydrolase lipase region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.2   0.0   4.5e-23   1.6e-19       2      63 ..      79     142 ..      78     143 .. 0.89

  Alignments for each domain:
  == domain 1  score: 69.2 bits;  conditional E-value: 4.5e-23
  Abhydro_lipase   2 seiirkhGypveeheVqTeDGYiLtlhRipaknk..svssklekkpvVlLqHGLlasSevwvln 63 
                      +++r  Gy veeh V+T+D+YiL +hRi + ++     +  ++ pv++++HGLl++Sevw +n
      EPX71918.1  79 RQMCRISGYTVEEHLVRTQDDYILCIHRISKDRPgkIGMPIPKRLPVIYCHHGLLMNSEVWACN 142
                     69*******************************95433455677799***************98 PP

>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   1.5e-07   0.00055      23     116 ..     149     254 ..     145     297 .. 0.78
   2 !    7.0   0.0   0.00087       3.1     183     209 ..     367     393 ..     347     412 .. 0.86

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 1.5e-07
  Hydrolase_4  23 laeaLaaqGfavyalDhrGhGrse.........gkrghvpsfddyvdDlaafvekvkeehpelplfllGhSmGGliallyllrypd...kvaglilsa 108
                  l+++L+++G++v+  ++rG   s          +  + ++  d    D+   ++ + +++++++l+ +G S G++ a+++l  +p    kv+ +i  a
   EPX71918.1 149 LIYQLVDEGYDVWLGNNRGNKYSRqhlrfdstdNDFWNFSIDDFAHYDIPDTIDYILQTSEQKQLTYIGFSQGSAQAFAALSVQPLlneKVNCFIALA 246
                  6789*****************99988887766444444444444456777889****************************666655558******** PP

  Hydrolase_4 109 Palkikak 116
                  Pa+++   
   EPX71918.1 247 PAMSPGGL 254
                  **998744 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.00087
  Hydrolase_4 183 leeraakitlPllllhGeaDkvvdpea 209
                  ++  +++i++P+ll+ Ge D +vd ++
   EPX71918.1 367 ARFPTKNIRTPILLFWGELDSLVDIQP 393
                  5667899****************9876 PP

>> FSH1  Serine hydrolase (FSH1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.0   5.2e-05      0.19      68     142 ..     180     246 ..     163     276 .. 0.73
   2 !    8.6   0.0   0.00037       1.3     151     177 ..     364     391 ..     311     412 .. 0.81
   3 ?   -2.7   0.9       1.1   3.9e+03      50      77 ..     465     499 ..     436     509 .. 0.53

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 5.2e-05
        FSH1  68 eesraWfrkkdekneyegleesldavkdyikengpfdGiiGFSqGaalaallaslleellkeashpslkfailvs 142
                 +++  W ++ d + + +++ +++d++ ++ ++++     iGFSqG+a a + +s +  l++     +++++i+++
  EPX71918.1 180 TDNDFWNFSID-DFAHYDIPDTIDYILQTSEQKQ--LTYIGFSQGSAQAFAALSVQPLLNE-----KVNCFIALA 246
                 45555666665.5566678999*****9999998..778********99988887765544.....455666555 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00037
        FSH1 151 yee.yyeedkiqtptLhvlGelDtvvde 177
                 y++  + +++i+tp+L + GelD++vd 
  EPX71918.1 364 YRAaRFPTKNIRTPILLFWGELDSLVDI 391
                 3332458999****************95 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 1.1
        FSH1  50 kadlpkseseeee.......kseeeeesraWfrkk 77 
                  ++ ++++s+e++       ++++++++++W  ++
  EPX71918.1 465 DEEYEGEKSKEDKkvdklvrRDKKNKKKWGWKMND 499
                 33333333333335666644455555555554444 PP

>> Esterase  Putative esterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   1.5e-05     0.054      22     138 ..     121     234 ..     106     292 .. 0.77
   2 ?   -3.2   0.2       1.5   5.4e+03     218     235 ..     455     472 ..     437     476 .. 0.56

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.5e-05
                 TTEEEEEEE--T....THHCCHHHHHCH.HCCCCHCCT.EEEEEECCCSS-TTTTTSBTTSBB.TTEEETTCCCCCCHCHHHHTHHHHHHHHHCSEECC CS
    Esterase  22 rkypvvylldGl....tgwdqnfrakel.leslaregeiaeviivvvprggessfysdwdlgarfyenategpgaeayetfltqeLlplldanfrtapd 115
                 +++pv+y+++Gl    + w  n   +   +++l++eg     +  +  rg+++   s+ +l     +   ++ ++   ++f +  +++++d  ++t+++
  EPX71918.1 121 KRLPVIYCHHGLlmnsEVWACNIDPENClIYQLVDEG---YDVWLGNNRGNKY---SRQHLR---FDSTDNDFWNFSIDDFAHYDIPDTIDYILQTSEQ 210
                 789*************99**99988875157888885...6667777777777...333332...34567777888888******************** PP

                 C.EEEEEETHHHHHHHHHHHCSTT CS
    Esterase 116 g.ravaGqSmGGlgALilalkhpd 138
                 +  + +G+S+G   A  + +  p 
  EPX71918.1 211 KqLTYIGFSQGSAQAFAALSVQPL 234
                 99999******9999888777663 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.5
                 HCCCCCCTT-SCCCC--S CS
    Esterase 218 qlaargvegedheydGgh 235
                   ++++++++d+ey+G  
  EPX71918.1 455 SPQNQNQQERDEEYEGEK 472
                 335556666677776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (514 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1537  (0.085727); expected 358.6 (0.02)
Passed bias filter:                      824  (0.0459591); expected 358.6 (0.02)
Passed Vit filter:                        85  (0.00474092); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.79u 0.36s 00:00:01.14 Elapsed: 00:00:00.54
# Mc/sec: 2853.84
//
Query:       EPX71919.1  [L=434]
Description: kinetochore protein Mis16 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      1e-29  102.5   0.5    2.8e-29  101.2   0.5    1.8  1  CAF1C_H4-bd  Histone-binding protein RBBP4 or subunit C of CA
    1.3e-23   82.8  10.6      5e-05   24.0   0.3    6.0  6  WD40         WD domain, G-beta repeat
    3.2e-05   24.2   0.1       0.18   12.1   0.0    4.1  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain


Domain annotation for each model (and alignments):
>> CAF1C_H4-bd  Histone-binding protein RBBP4 or subunit C of CAF1 complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.2   0.5   4.7e-33   2.8e-29       1      67 []      32     102 ..      32     102 .. 0.94

  Alignments for each domain:
  == domain 1  score: 101.2 bits;  conditional E-value: 4.7e-33
                  HHHHHHHHHHHHHEEEEEEEE-SS--S-EEE-S-..B--.-.EEEEEEEE----TTSS-EEEEEEEEEEEX CS
  CAF1C_H4-bd   1 eeylewkknapfLYdmlhshslewPsLsfdwlPd..tvs.s.lskqrllvGtqtsgkeqnylyvakvslpk 67 
                  eey+ wk+n+pfLYd++++h+lewPsL+++wlPd  tv  + +s+qrll+Gt+tsg +qnyl+va+v+lp+
   EPX71919.1  32 EEYKLWKQNVPFLYDLVITHALEWPSLTVQWLPDkhTVPgKdYSVQRLLLGTHTSGHDQNYLQVASVQLPN 102
                  7*********************************55444999***************************96 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       1.6   9.8e+03       6      15 ..      84      97 ..      78     105 .. 0.64
   2 !   12.7   0.0   3.1e-05      0.19       2      38 .]     177     215 ..     176     215 .. 0.87
   3 !    9.4   0.1   0.00033         2       7      38 .]     235     268 ..     230     268 .. 0.72
   4 !   22.1   0.0   3.3e-08   0.00019       7      38 .]     281     314 ..     277     314 .. 0.85
   5 !   24.0   0.3   8.3e-09     5e-05       2      38 .]     320     358 ..     319     358 .. 0.82
   6 !   16.6   0.1   1.8e-06     0.011       7      38 .]     382     415 ..     377     415 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1.6
                EEESS.SS...EEE CS
        WD40  6 tltGH.ss...vts 15
                + +GH ++   v s
  EPX71919.1 84 HTSGHdQNylqVAS 97
                44677522455555 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 3.1e-05
                 EEEEEEESS..SSEEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40   2 qclrtltGH..ssvtslafspdgaw.lasGsdDgtvriWd 38 
                 +++ +l+GH   + ++l+++p+++  la++ +D+ + +Wd
  EPX71919.1 177 SPQAILRGHtsEG-YGLCWNPNQPGrLATAAEDQLICLWD 215
                 68999****6333.7**********999999********9 PP

  == domain 3  score: 9.4 bits;  conditional E-value: 0.00033
                 EESSSS.EEEEEEETTSSEEE.EEETTSEEEEEE CS
        WD40   7 ltGHss.vtslafspdgawla.sGsdDgtvriWd 38 
                 +  Hs+ v++++++p +  l+ s sdD+t+ i d
  EPX71919.1 235 FHRHSDiVNDVQYHPQHEALLvSVSDDCTLQIHD 268
                 44467767***98888888652669****98865 PP

  == domain 4  score: 22.1 bits;  conditional E-value: 3.3e-08
                 EESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS
        WD40   7 ltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 
                 + +H s ++++a +p +++l a++s D+tv +Wd
  EPX71919.1 281 IHAHsSAINAVAINPFNDYLlATASADKTVALWD 314
                 5699666************7368899*******9 PP

  == domain 5  score: 24.0 bits;  conditional E-value: 8.3e-09
                 EEEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 
                 q l+tl+GH ++v++l    +d + las+s D+ v iWd
  EPX71919.1 320 QRLHTLEGHeDDVYGLEwSTHDEPILASSSTDRRVCIWD 358
                 569******999****655555555899999*******9 PP

  == domain 6  score: 16.6 bits;  conditional E-value: 1.8e-06
                 EESS.SSEEEEEEETTSSEEEEE.ETTSEEEEEE CS
        WD40   7 ltGH.ssvtslafspdgawlasG.sdDgtvriWd 38 
                   GH + ++ ++++p+ +w++++  dD+ + +W+
  EPX71919.1 382 HGGHtNRISEFSWCPNERWVFASiADDNILQVWS 415
                 469*888*************988889*******5 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0     0.042   2.5e+02      38      71 ..     186     220 ..     143     235 .. 0.77
   2 ?    2.0   0.0     0.042   2.5e+02      38      66 ..     239     268 ..     232     274 .. 0.80
   3 !   12.1   0.0     3e-05      0.18       9      67 ..     300     359 ..     291     373 .. 0.82
   4 ?    2.0   0.0     0.043   2.6e+02      36      62 ..     384     410 ..     375     417 .. 0.78

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.042
  ANAPC4_WD40  38 dsevrsLaWkpdg.klLavaysdgevrlldaesgk 71 
                   se  +L+W+p+    La a +d  + l d+++  
   EPX71919.1 186 TSEGYGLCWNPNQpGRLATAAEDQLICLWDINTSS 220
                  4555689***9973589******999999998765 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.042
  ANAPC4_WD40  38 dsevrsLaWkpdgklLavaysdg.evrlld 66 
                  +  v++++++p+ + L v++sd  +++++d
   EPX71919.1 239 SDIVNDVQYHPQHEALLVSVSDDcTLQIHD 268
                  5568999*****999999998764777776 PP

  == domain 3  score: 12.1 bits;  conditional E-value: 3e-05
  ANAPC4_WD40   9 LiAlatedgellvf..RlngqrvwtleedkedsevrsLaWk.pdgklLavaysdgevrllda 67 
                  L+A a++d+ +++   R   qr+ tl  ++++  v +L+W+ +d+ +La +  d +v + d 
   EPX71919.1 300 LLATASADKTVALWdlRNPHQRLHTL--EGHEDDVYGLEWStHDEPILASSSTDRRVCIWDL 359
                  89999999999885227778******..899999******83577899*9999999999886 PP

  == domain 4  score: 2.0 bits;  conditional E-value: 0.043
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgev 62 
                  ++ +++++++W p+++    +++d ++
   EPX71919.1 384 GHTNRISEFSWCPNERWVFASIADDNI 410
                  678899*********987777766554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (434 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       285  (0.015896); expected 358.6 (0.02)
Passed bias filter:                      259  (0.0144459); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 2936.95
//
Query:       EPX71920.1  [L=1317]
Description: P-type ATPase P5 type [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.8e-34  116.5   0.8    8.1e-32  110.0   0.0    3.2  3  P5-ATPase        P5-type ATPase cation transporter
    1.9e-31  109.0   0.1    6.1e-31  107.3   0.1    1.9  1  E1-E2_ATPase     E1-E2 ATPase
    1.4e-09   38.6   0.0     0.0069   16.7   0.0    3.3  3  Hydrolase        haloacid dehalogenase-like hydrolase
    1.3e-05   25.2   0.0    2.8e-05   24.1   0.0    1.5  1  Cation_ATPase    Cation transport ATPase (P-type)
    0.00027   20.6   0.0     0.0006   19.5   0.0    1.5  1  Cation_ATPase_N  Cation transporter/ATPase, N-terminus
     0.0023   17.2   6.5     0.0023   17.2   6.5    2.7  3  7tm_7            7tm Chemosensory receptor


Domain annotation for each model (and alignments):
>> P5-ATPase  P5-type ATPase cation transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.0   0.0   2.7e-35   8.1e-32       1     125 []     154     272 ..     154     272 .. 0.97
   2 ?    3.1   0.0     0.032        95      36      85 ..     828     876 ..     827     886 .. 0.86
   3 ?   -1.5   0.0      0.86   2.6e+03      10      31 ..    1210    1231 ..    1208    1235 .. 0.90

  Alignments for each domain:
  == domain 1  score: 110.0 bits;  conditional E-value: 2.7e-35
   P5-ATPase   1 edleieiaGyrtsrwrlalyilgciltlGlllLlfrWlPewrvkltgkpcpLkeadvvliedefgelsvkkvrkleyerplstvfsseqeegeekeies 99 
                 edle+ iaGyrt+++r+ +y l+cilt+Gl++L++rWlP+ +++++gk+ pL+ a+++ ie+++ge+s  ++++++ye++lst+f      g++  +++
  EPX71920.1 154 EDLEVGIAGYRTNKLRARIYNLICILTFGLVYLIMRWLPRHYIRFIGKREPLATAEWLSIETQYGEISKSDIQVQPYENSLSTIF------GASIRVAT 246
                 799**********************************************************************************......88777777 PP

   P5-ATPase 100 keseekdpelqqlryfdyryiryvwn 125
                 +e +++dp +++ ry++yry++++++
  EPX71920.1 247 SEGTDNDPFVENFRYVNYRYMKLIFH 272
                 77889*******************98 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.032
   P5-ATPase  36 rWlPewrvkltgkpcpLkeadvvliedefgelsvkkvrkleyerplstvf 85 
                  W    r+k t +++ L  +  ++ e++ +  ++  +++le ++++ tv+
  EPX71920.1 828 TWAKAQRMKRTQVESDLDFCGLIVFENKLKSSTIPVINELE-DSKIRTVM 876
                 699999**************************999999988.55577776 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 0.86
   P5-ATPase   10 yrtsrwrlalyilgciltlGll 31  
                  yr+++wr + +++ ++  lG++
  EPX71920.1 1210 YRQRMWRNVSFTVSICALLGIA 1231
                  9**************9999997 PP

>> E1-E2_ATPase  E1-E2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.3   0.1     2e-34   6.1e-31       7     181 .]     391     599 ..     388     599 .. 0.96

  Alignments for each domain:
  == domain 1  score: 107.3 bits;  conditional E-value: 2e-34
                   EEEE-TTS-EEEEGGG--TTSEEEEET..T-B--SEEEEEEE-SEEE-TTTS---S-EE-.....................G-TTEE-TT-EEEE.. CS
  E1-E2_ATPase   7 akvirdgteeeidakelvpGDivllka..gdrvpaDgrivegsaevdesaLTGEslpvek.....................ekgdmvfsGtvvvs.. 78 
                   ++v+rdg + +i++++lv+GD+ ++      + paD+ +++g + v+es+LTGEs pv+k                       ++ +f+Gt +++  
    EPX71920.1 391 VRVYRDGFWASIPSSDLVVGDVFEISDpeLTVFPADALLLSGDCIVNESMLTGESIPVSKipatnqgmkdlfafsriippsLSKHFLFGGTKIIQvr 487
                   7899*********************87324567*******************************************999977*************** PP

                   .........-EEEEEEEE-TTTSTTTTTSTTS--------HHHHHHHHHHHHHHHHHHHHHHHHHHS-STTTSSTTHHHHHHHHHHHHHS-TTHHHH CS
  E1-E2_ATPase  79 .........geakavVtatgedtelgkiarlveeakskktplqkkldklgkvlvpvvlliallvflialllgkslaeallralallvaaiPcaLpla 166
                            g   a V++tg +t+ g ++r++  +k++++ + +   +++  +++++++ +++  + +l++g ++ ++++ral+l+++++P+aLp++
    EPX71920.1 488 kpfvnekeeGASLAMVIRTGFNTTKGALVRSMIFPKPTNFGFYRDSFRFITAMFIIAVIGFVFSSINLLTIGVPAKTIIIRALDLITIVVPPALPAT 584
                   ************************************************************************************************* PP

                   HHHHHHHHHHHHHHT CS
  E1-E2_ATPase 167 vplalalgarrlakk 181
                   +++ ++++++rl k+
    EPX71920.1 585 LTIGTTFAISRLRKQ 599
                   ************986 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.1   0.1     0.002       5.9       2      22 ..     616     639 ..     615     668 .. 0.77
   2 !   16.7   0.0   2.3e-06    0.0069      67     156 ..     773     893 ..     743     911 .. 0.77
   3 !   10.7   0.0   0.00016      0.48     170     210 .]     987    1029 ..     961    1029 .. 0.86

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.002
                 SEEEEESBTTTBCHH...HHHHHH CS
                 xxxxxxxxxxxxxxx...xxxxxx RF
   Hydrolase   2 ktvvfDkdGTLttge...psvedv 22 
                 +++ fDk+GTLt+     + v  +
  EPX71920.1 616 DLISFDKTGTLTEDGldiMGVSVI 639
                 6899********655455555555 PP

  == domain 2  score: 16.7 bits;  conditional E-value: 2.3e-06
                 E......HHHHTHHHHHHHH....HCHHHHHHHHHHHHHHCHHHHHH.......................TTHHHHHHHHHHTHHBHTTHHHHHHHHHH CS
                 x......xxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxx.......................xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  67 g......ayaigkpewltal....dippdlgaaigsaqsqgrtvall.......................qaralavftiadplkvkpeaaeavasLka 132
                 g       y +g pe + +      +p+++++  + +   g  v+ +                       + + ++++ ++++  +k  +  ++++L +
  EPX71920.1 773 GqykkmdIYVKGAPEVMPSIckpeSFPENYQEVLDYYTHNGFRVIACaskhlenctwakaqrmkrtqvesDLDFCGLIVFENK--LKSSTIPVINELED 869
                 455555566666666666666666666666666666666777766667777777777777777777776699*********99..************** PP

                 TTEEEEEEESSEHHHHHHHHHHTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 133 agievvlltgdnpetaeraanqlG 156
                  +i++v++tgdn  t   + +++G
  EPX71920.1 870 SKIRTVMCTGDNVLTSICVGKRCG 893
                 ************988777776666 PP

  == domain 3  score: 10.7 bits;  conditional E-value: 0.00016
                  S..STTTSHHHHHHHHHHHTSTGGGEEEEESSHHHHHHHHHTT CS
                  x..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  170 t..vakpspegkvaaireLqgkpeevamVGDgvnDaaalaaAg 210 
                  t  +a  sp+ k++++  +q     v + GDg+nD  al+aA+
  EPX71920.1  987 TqiFARMSPSEKNELVSCFQKLDYCVGFCGDGANDCGALKAAD 1029
                  3569999************9777789****************8 PP

>> Cation_ATPase  Cation transport ATPase (P-type)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.0   9.5e-09   2.8e-05      35      88 ..     728     793 ..     679     795 .. 0.75

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 9.5e-09
  Cation_ATPase  35 l............gldteelreetkkvqeipFnssrKrmsvvlklepekkvrlyvKGApeiilkrC 88 
                    l            +++++e + e  ++++++F s+ +rm+v++k  + kk+ +yvKGApe++ + C
     EPX71920.1 728 LipptvsppwndpSINYSESDLELGIIRTFEFVSQLRRMAVIVKHGQYKKMDIYVKGAPEVMPSIC 793
                    345555555555556666666668899**********************************98888 PP

>> Cation_ATPase_N  Cation transporter/ATPase, N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0     2e-07    0.0006      18      69 .]     297     347 ..     288     347 .. 0.94

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 2e-07
  Cation_ATPase_N  18 enGLtqaeaaerlkkyGpNelkekkkkslwvkllkqftnplvilLlvaalvs 69 
                      ++GL  +++++r k +G N++ + + k ++++l++++ +p++i+ +++ +++
       EPX71920.1 297 KEGLERDAINDRTKIFGQNII-DLETKGVIQLLVDEVLHPFYIFQVFSIILW 347
                      79*******************.***********************9999885 PP

>> 7tm_7  7tm Chemosensory receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.3      0.64   1.9e+03      73      91 ..     173     191 ..     162     201 .. 0.47
   2 ?   -3.6   1.7       1.7     5e+03     242     264 ..     347     369 ..     335     387 .. 0.49
   3 !   17.2   6.5   7.6e-07    0.0023      22     118 ..    1206    1303 ..    1188    1312 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.64
       7tm_7  73 qlvlglltvlvillsllfq 91 
                 ++++++lt  +++l + + 
  EPX71920.1 173 YNLICILTFGLVYLIMRWL 191
                 2333333333333333333 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 1.7
       7tm_7 242 llillssfinitvllyylyssll 264
                 + + +++++ i++ l  ++s+++
  EPX71920.1 347 WSLDAYYYYAICIFLISVVSIIG 369
                 33333333333333333333332 PP

  == domain 3  score: 17.2 bits;  conditional E-value: 7.6e-07
       7tm_7   22 rrrlrw.rrlllllllllllvllvllvlflivlkreeyffrrsallevvynlqlvlglltvlvillsllfqrrrlarllnellkldrrlkrlgnrrn 117 
                   +   + r++  + ++++++ ll ++v  +  ++r++yf+++ +l+ + +n+q+++ ++++++ ++ +  q++ +  l+n + +l rrl+   + ++
  EPX71920.1 1206 VGPPYRqRMWRNVSFTVSICALLGIAVSLTKLHDRNNYFMKVFRLTPMSDNFQNFIIFCALIYYVCAASGQQYIFTGLVNTISRLYRRLQNKRKVSK 1302
                  444455599********************************************************************************99888776 PP

       7tm_7  118 k 118 
                  k
  EPX71920.1 1303 K 1303
                  4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1317 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       733  (0.0408835); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.86u 0.31s 00:00:01.17 Elapsed: 00:00:00.49
# Mc/sec: 8148.58
//
Query:       EPX71921.1  [L=306]
Description: ER membrane insertion protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-64  218.5   0.0    1.4e-64  218.3   0.0    1.0  1  DUF410    Protein of unknown function (DUF410)


Domain annotation for each model (and alignments):
>> DUF410  Protein of unknown function (DUF410)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  218.3   0.0   7.9e-69   1.4e-64       1     255 []      36     293 ..      36     293 .. 0.97

  Alignments for each domain:
  == domain 1  score: 218.3 bits;  conditional E-value: 7.9e-69
      DUF410   1 qkkydeAidllyqgalellkakqygsgaDLalllvevyekaevevdeeskdrliellskfpaeeperkkfikaaikwSakkgekkaGdpeLhhllakll 99 
                 +kkyd++i lly+ga++l++ +q gs++DL ++l++vy ka ++v++++k++ ++ll +fp+ee +rk+++k+ ++w + +g  ++Gd+++h  ++ +l
  EPX71921.1  36 SKKYDDSIGLLYSGAKTLFELQQSGSAGDLSIYLIDVYIKASTSVSADYKAKALALLGSFPSEEGSRKQYVKKLLEWANCTG--PQGDCDIHASVGIML 132
                 69***************************************************************************99988..9************** PP

      DUF410 100 lkegeleeAerhlllgtddsaeelakllvewaeegeeseadlfiaRavLqylllgnvkaAnklldeflkkleskessll.....te...rvfp.lplln 189
                 +k g+   Aerhl++g+++ +  +a++l++wa ++++++ +lfi RavL+yll+g+  +A ++l+ f++ +e++ +s +     +    +vf+ +p ln
  EPX71921.1 133 MKWGDPVSAERHLVVGNEKCPAFYAQMLFNWANTSKNEDPALFIGRAVLKYLLVGSPANALQCLTIFMQLFERSGHSPDetfsiDGiriPVFNsYPYLN 231
                 **************************************************************************98777888872256799******** PP

      DUF410 190 FlqlllltiqrkskelFkkLkekYkpslkrdpslkeylekIgelyFgikpprqqsnglqdmmssLl 255
                 +l+ll+l+  rk+ke++ +L +kY +    +p+++++l+k++e yFgi+p ++q n+l+++mssL+
  EPX71921.1 232 YLHLLILAAYRKDKETYLSLSQKYPK----KPEWESALTKVEEAYFGIRPVNTQPNMLANLMSSLF 293
                 ************************98....688999*****************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (306 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       378  (0.0210832); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.47
# Mc/sec: 1940.43
//
Query:       EPX71922.1  [L=769]
Description: exocyst complex subunit Sec15 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.4e-69  233.7   1.6    3.4e-69  233.7   1.6    2.4  3  Sec15          Exocyst complex subunit Sec15-like
     0.0068   16.3   2.9      0.025   14.5   2.9    2.0  1  Sec8_exocyst   Sec8 exocyst complex component specific domain
  ------ inclusion threshold ------
        0.1   12.9   8.6        1.1    9.7   8.4    2.9  2  Syntaxin_2     Syntaxin-like protein
       0.12   12.4   0.6       0.32   11.0   0.3    1.9  2  Bap31_Bap29_C  Bap31/Bap29 cytoplasmic coiled-coil domain
       0.17   11.9   6.7       0.76    9.8   6.4    2.2  2  Baculo_PEP_C   Baculovirus polyhedron envelope protein, PEP, 
       0.48   10.6   3.7        8.6    6.6   1.7    2.7  2  SesA           N-terminal domain on NACHT_NTPase and P-loop N
       0.68    9.6   4.7        0.3   10.8   1.5    2.0  2  Med4           Vitamin-D-receptor interacting Mediator subuni
          2    8.0   6.0        1.2    8.8   1.3    2.3  2  YkyA           Putative cell-wall binding lipoprotein


Domain annotation for each model (and alignments):
>> Sec15  Exocyst complex subunit Sec15-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.2         2   4.4e+03     106     156 ..      67     119 ..      47     142 .. 0.55
   2 ?   -1.0   0.1       0.4     9e+02     203     254 ..     329     380 ..     265     411 .. 0.60
   3 !  233.7   1.6   1.5e-72   3.4e-69      23     316 .]     449     738 ..     435     738 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 2
                 TTHHHHHHTTS---S.......TTT--TT--...--THHHHHHHHHHHHHHHHH CS
       Sec15 106 fetackelekllaqerssqrggnieqnsaee...iklkaskkfkearkaAekki 156
                 f +++++l+ + +++ ++ r + ++ n++++     lk  k+  +++k++e+++
  EPX71922.1  67 FSKSVHQLSVVRNEL-HTLRSHIADLNTDIQasgKDLKNMKQQLNSLKDSERQL 119
                 555555555444443.22222223333333311233333333334444455444 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.4
                 ITTS-SSTTTTHHHHTTTHHHHHHHHHTTS---S--SSSHHHHHHTTTSSGG CS
       Sec15 203 lvnLpesvkelvyfraldhiaeslldlllseevkrineeavenlelDvkyle 254
                 l+ +p+   ++ + + ++ i+++l++ +l    ++ +++a+ ++++ +  l 
  EPX71922.1 329 LQEIPNFRSYEEVQNIWSIICDKLIESILRVAFSEQSTTAIIKMKNYIVLLM 380
                 4444444444444455555555555555555555555555555554444444 PP

  == domain 3  score: 233.7 bits;  conditional E-value: 1.5e-72
                 -------------SSHHHHHHHHHHHHHHHT---SSS-STTTTTHHHHHHHS-SSTGGGHHHHHHH--....-STTTTTTTHHHHTTTHHHHHHTTS-- CS
       Sec15  23 sefpvtlPFSqlyplcCidirkfieklykFledlyqhereiddilrksldeLLirvvseklrsklkst...lnleqiaQiliNleyfetackeleklla 118
                 s++p+   FS+++ lcCi + kf +++y+F++d      ++   +++++ ++ +r++ ++l ++lk+    lnl+q+aQ++ N+  fe+ + ++ek l 
  EPX71922.1 449 SPLPRMVEFSKMCSLCCITLSKFTRHFYMFSNDS----ITLALDVQEKIPRFYRRFIMHSLLERLKNLypkLNLSQMAQLVKNFYAFEEPLIQMEKTLL 543
                 34899*****************************....899999999******************9988889*************************99 PP

                 -S.......TTT--TT----THHHHHHHHHHHHHHHHHHHHHHHHT----------------------HHHHHHHHHHHIIIIIITTS-SSTTTTHHHH CS
       Sec15 119 qerssqrggnieqnsaeeiklkaskkfkearkaAekkifelvdsKiddflelaeydWtpteaesepseylkdliqfLetifssvlvnLpesvkelvyfr 217
                  ++s+++gg +e++++++ + +  + +++ark A ++if +++ Kiddf++laeydW++t +++ ps +l++++ +L+ti+   l+ L ++ k++vy++
  EPX71922.1 544 ISKSTSQGG-SENSNVNSKSSDILEGLANARKSALHEIFVKINLKIDDFIGLAEYDWSTTVSRTAPSGFLQEMVPYLQTIYLDSLAGLFNHDKSYVYLE 641
                 988888876.55556667789999*************************************************************************** PP

                 TTTHHHHHHHHHTTS---S--SSSHHHHHHTTTSSGGG-----------------------TTTT.TTT--S.SHHHHHHHHSS-SS-TTTTTTTTTHH CS
       Sec15 218 aldhiaeslldlllseevkrineeavenlelDvkylesfakslsvskkeeslestfaelrqlidLllsdnveeYldpsirerkYsrvkpekaaklleKl 316
                 +ldh+++ ++dll ++ ++r++++a e +++Dv+yle+fa+++++++     +++f+elrq+ +Lll dn+e+Y+d ++ +r+++r++p++ +klle+l
  EPX71922.1 642 TLDHLCTAMIDLLSNPAIRRVSTAAAEGFKVDVEYLEKFASQVPDQSI--VNADSFIELRQCANLLLGDNIEDYMDTDKFTRDFNRLHPSTSIKLLERL 738
                 ********************************************9965..89*************99******************************86 PP

>> Sec8_exocyst  Sec8 exocyst complex component specific domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   2.9   1.1e-05     0.025      42     118 ..      42     118 ..      37     145 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 1.1e-05
  Sec8_exocyst  42 lkefkqlkkqieeaLqevvnehhqaFnssiasYskilssiqesqekvselKesleeakkklstkkkeLkelnarsak 118
                   ++ +++l ++ +  +++   e+ q+F++s+   s + + ++  ++++++l  +++++ k+l++ k++L+ l+++ ++
    EPX71922.1  42 YQRLNELGNKNAIRVEQLCAENNQDFSKSVHQLSVVRNELHTLRSHIADLNTDIQASGKDLKNMKQQLNSLKDSERQ 118
                   66777777777888999999***************************************************987654 PP

>> Syntaxin_2  Syntaxin-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   8.4   0.00047       1.1      20      97 ..      72     147 ..       9     148 .. 0.74
   2 ?   -1.7   0.0       1.7   3.7e+03      54      82 ..     696     726 ..     688     728 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00047
  Syntaxin_2  20 kqLgtkkdteelreklhelieeinelikkt...nellkklsqldnsssds.qqklqkekLkkdfkealqeFqkiqrqyaeke 97 
                  qL+       +r++lh+l+++i +l +++    ++lk+++q  ns++ds +q +  + L++++ ++l ++  +q+  ++k+
  EPX71922.1  72 HQLSV------VRNELHTLRSHIADLNTDIqasGKDLKNMKQQLNSLKDSeRQLFLCQDLTQSCLRVLYKLRDAQELLSKKQ 147
                 44433......45666666666666655551114444444444444444479999*********************999987 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.7
  Syntaxin_2  54 kklsqldnsssds..qqklqkekLkkdfkea 82 
                  +l q++n ++++    ++  +k ++df+++
  EPX71922.1 696 IELRQCANLLLGDniEDYMDTDKFTRDFNRL 726
                 567777777777788889999*******986 PP

>> Bap31_Bap29_C  Bap31/Bap29 cytoplasmic coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.3   0.00014      0.32       3      28 ..      88     113 ..      86     115 .. 0.92
   2 ?   -4.1   0.0       7.7   1.7e+04      29      38 ..     434     443 ..     432     448 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00014
  Bap31_Bap29_C   3 iekLkkeLkkkkkDlealKkQaegla 28 
                    i+ L++ ++++ kDl+++K+Q  +l+
     EPX71922.1  88 IADLNTDIQASGKDLKNMKQQLNSLK 113
                    88999*****************9996 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 7.7
  Bap31_Bap29_C  29 kEYDrLadeh 38 
                    kEY  L   +
     EPX71922.1 434 KEYEELIAPY 443
                    8998887655 PP

>> Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   6.4   0.00034      0.76       4     111 ..       9     112 ..       6     127 .. 0.67
   2 ?   -1.7   0.0       1.2   2.8e+03      35      65 ..     174     205 ..     163     238 .. 0.39

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00034
  Baculo_PEP_C   4 vqqL.nggggnqfldLtnvLnairlqnvqilaqlatlldaietqLnalsedlksllaeldtrldtlltnLtdalnalqdtlrneLtnlnsiltnLls 99 
                   v+++ ++ + +++ld  + L ++  q+ q   q+ + l+++ ++  + + ++++l ae ++++++++++L+   n+l  tlr+++  ln+++     
    EPX71922.1   9 VNKIaTIESNGDTLDHLPRLITLACQKNQE-LQVYQRLNELGNK--N-AIRVEQLCAENNQDFSKSVHQLSVVRNELH-TLRSHIADLNTDIQASGK 100
                   667766666666667666676666665555.5666666666652..2.335777777777777777777777777776.777777777777777777 PP

  Baculo_PEP_C 100 svtNinstLnnl 111
                   ++ N+++ Ln+l
    EPX71922.1 101 DLKNMKQQLNSL 112
                   777777777766 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.2
  Baculo_PEP_C  35 qlatlldaietqL.nalsedlksllaeldtrl 65 
                    +++++ ++++++ ++  edl++ l +l+++l
    EPX71922.1 174 HVQQMISKMQNSVcSSALEDLHEWLFSLRKKL 205
                   44444444444331223333333333333333 PP

>> SesA  N-terminal domain on NACHT_NTPase and P-loop NTPases
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   1.7    0.0038       8.6      21     120 ..      81     187 ..      64     188 .. 0.84
   2 ?    2.9   0.0     0.051   1.1e+02      20      85 ..     520     586 ..     503     608 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0038
        SesA  21 ikglpeaFrevgkrLplvqetLedaksqlesskldedtesaikpvlescke...katkleeifekvapapad...srl.eryrkavrslgkgskVEtLm 112
                 +++l+  + + +  ++   + L+  k+ql+s k++e +    +++ +sc     k++  +e++ k +  p+    s++ + y + +++l   s V+++ 
  EPX71922.1  81 LHTLRSHIADLNTDIQASGKDLKNMKQQLNSLKDSERQLFLCQDLTQSCLRvlyKLRDAQELLSKKQYLPSLricSEVeKIYLERIKGLTIHSHVQQMI 179
                 677788888888888888899****************9999********99888999999999998554444558999899999999999999999999 PP

        SesA 113 kgiledlq 120
                 ++++++++
  EPX71922.1 180 SKMQNSVC 187
                 99999887 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.051
        SesA  20 dikglpeaFrevgkrLplvqetLedaksqlesskldedtesaikpvlescke.katkleeifekvap 85 
                 ++ +l ++F + ++ L   ++tL   ks+ ++++++++ +s+  ++le+  + +  +l+eif k++ 
  EPX71922.1 520 QMAQLVKNFYAFEEPLIQMEKTLLISKSTSQGGSENSNVNSKSSDILEGLANaRKSALHEIFVKINL 586
                 47899999999*******************************9999999987355679****99965 PP

>> Med4  Vitamin-D-receptor interacting Mediator subunit 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   1.5   0.00013       0.3      21      67 ..      71     117 ..      57     129 .. 0.85
   2 ?   -2.3   0.1       1.4   3.1e+03      10      38 ..     158     186 ..     156     204 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00013
        Med4  21 leehqknearilqLraeveslDekikeivksLkeyekeLkavpdqen 67 
                 +++    ++++ +Lr +++ l + i+   k Lk+++++L+++ d e+
  EPX71922.1  71 VHQLSVVRNELHTLRSHIADLNTDIQASGKDLKNMKQQLNSLKDSER 117
                 4455567899******************************9985554 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 1.4
        Med4  10 addelskslkeleehqknearilqLraev 38 
                 +++ + + +k l  h   ++ i+++++ v
  EPX71922.1 158 VEKIYLERIKGLTIHSHVQQMISKMQNSV 186
                 6778888999999*********9999876 PP

>> YkyA  Putative cell-wall binding lipoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   1.3   0.00051       1.2      23      98 ..      41     116 ..      28     123 .. 0.75
   2 ?    0.6   0.2      0.17   3.9e+02      10      70 ..     518     577 ..     515     583 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00051
        YkyA  23 qqekLtelekkeqelyeeiielgmdefdkikklsdealenveeReellekekesieeakeefekikeeieeiedee 98 
                   + L+el +k     e++ + + ++f+k + + + + + +   +++++  ++ i+++ + ++++k+++++++d+e
  EPX71922.1  41 VYQRLNELGNKNAIRVEQLCAENNQDFSKSVHQLSVVRNELHTLRSHIADLNTDIQASGKDLKNMKQQLNSLKDSE 116
                 4467888888888888888888888888888888888888888888888888888888888888888888888775 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.17
        YkyA  10 leeavelEkefeeqqekLtelekkeqelyeeiielgmdefdkikklsdeale.nveeReell 70 
                 l ++++l k+f +  e+L ++e  ++ l ++  ++g +e+++++++s++ le ++++R++ l
  EPX71922.1 518 LSQMAQLVKNFYAFEEPLIQME--KTLLISKSTSQGGSENSNVNSKSSDILEgLANARKSAL 577
                 6788888899999999999999..5678999999999999***9999998873556777666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (769 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1124  (0.0626917); expected 358.6 (0.02)
Passed bias filter:                      666  (0.0371465); expected 358.6 (0.02)
Passed Vit filter:                       101  (0.00563333); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.75u 0.30s 00:00:01.05 Elapsed: 00:00:00.45
# Mc/sec: 5081.49
//
Query:       EPX71923.1  [L=220]
Description: glutathione S-transferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-11   43.4   0.0      7e-11   42.2   0.0    1.6  2  GST_C     Glutathione S-transferase, C-terminal domain
      4e-07   30.3   0.0    6.8e-07   29.5   0.0    1.4  1  GST_N     Glutathione S-transferase, N-terminal domain
    2.9e-06   27.2   0.0    5.2e-06   26.4   0.0    1.4  1  GST_C_2   Glutathione S-transferase, C-terminal domain
    5.2e-06   26.6   0.0    1.1e-05   25.6   0.0    1.5  1  GST_C_3   Glutathione S-transferase, C-terminal domain
  ------ inclusion threshold ------
      0.072   13.5   0.0       0.12   12.8   0.0    1.3  1  GST_N_3   Glutathione S-transferase, N-terminal domain
       0.13   12.6   0.0        0.2   12.0   0.0    1.3  1  Tom37     Outer mitochondrial membrane transport complex prot


Domain annotation for each model (and alignments):
>> GST_C  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       3.5   1.1e+04      61      81 ..      16      37 ..      15      37 .. 0.72
   2 !   42.2   0.0   2.3e-14     7e-11      17      92 ..     116     200 ..      93     200 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 3.5
                HHHHHHHHHHTTTTT.TTTSHH CS
       GST_C 61 vpilnwlqrlglafg.qekfpn 81
                v++l+ + rl+l ++  e +p+
  EPX71923.1 16 VCLLELAKRLNLQVDlVETYPH 37
                6777778888877776677876 PP

  == domain 2  score: 42.2 bits;  conditional E-value: 2.3e-14
                 H........HHHHHHHHHHHHHHHHHHHHHHHHHHTSSSSSTTSSCHHHHHHHHHHHHHHHHTTTTT.TTTSHHHHHHHHHHHTS CS
       GST_C  17 e........ekkeelvdealekvaevlsaleeelkkqdylvGdkltlADialvpilnwlqrlglafg.qekfpnlkawlerimar 92 
                            +e+  +e+  k   vl+ ++  l ++++lvG+++tlAD+++   l+  +r+ ++++ + k p+l++++ +++++
  EPX71923.1 116 WlgmcrgasPYEEKPFKESTAKALGVLKKFNDMLVDRTFLVGNRFTLADLVAGSMLRLFYRFIVDPEqRSKLPHLTRYYVTMFHQ 200
                 0555555555566678899999999*********************************************************975 PP

>> GST_N  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.5   0.0   2.3e-10   6.8e-07       3      73 ..       4      72 ..       2      75 .. 0.93

  Alignments for each domain:
  == domain 1  score: 29.5 bits;  conditional E-value: 2.3e-10
                EEEESSSTSHTHHHHHHHHHHTT-EEEEEEECSTTTCGGCHHHHHHCTTS-SSEEEET.TEEEESHHHHHHH CS
       GST_N  3 ltlysirgsprahrirlllaakgveyevvpldfeageekspellklnplgkvPaLedn.gkkltESraIleY 73
                +tlys+ ++ r+ +++ l++ +++++  v+  +++++   ++l+ ++pl+k+P+++   g+ l E  aIl+Y
  EPX71923.1  4 GTLYSFKDNTRTVCLLELAKRLNLQVDLVETYPHKFP---SDLAAKFPLQKLPVFISSnGLELSELFAILRY 72
                79******999999999999******99999987775...8***************999************* PP

>> GST_C_2  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   0.0   1.7e-09   5.2e-06       9      67 ..     136     194 ..     115     195 .. 0.88

  Alignments for each domain:
  == domain 1  score: 26.4 bits;  conditional E-value: 1.7e-09
                 HHCCHCHHHCTTT---SS.CTTCS--HHHHHHHHHHHHH.HHH.HHS----TT-HHHHHHH CS
     GST_C_2   9 eqldaaldaleahLadspflfGdqptlaDialapflvrl.raa.gpgfdireaypnlraWl 67 
                 +++   l+++++ L d++fl G+++tlaD ++  +l  + r++ +p  + r+++p+l +++
  EPX71923.1 136 AKALGVLKKFNDMLVDRTFLVGNRFTLADLVAGSMLRLFyRFIvDP--EQRSKLPHLTRYY 194
                 567778999****************************886666444..6799******998 PP

>> GST_C_3  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.0   3.6e-09   1.1e-05      25      92 ..     131     203 ..     112     207 .. 0.74

  Alignments for each domain:
  == domain 1  score: 25.6 bits;  conditional E-value: 3.6e-09
                 HHHHHHCH...HHHHHHHHHCHGTSSSSTTS--HHHHHHHHHHHHHHHH....TCCCC-HHHHHHHHHHHTSHHH CS
     GST_C_3  25 leerlpkf...lkyfekvlkkkgggylvgdklTyADlalfqvldgleea....ealkkfpklkalyervearpki 92 
                 ++e   k    lk+f+ +l     ++lvg+++T+ADl+  ++l  + ++    e+ +k p+l+++y  +  + ++
  EPX71923.1 131 FKESTAKAlgvLKKFNDMLV--DRTFLVGNRFTLADLVAGSMLRLFYRFivdpEQRSKLPHLTRYYVTMFHQGNL 203
                 34444444011555555565..899*********************99999754449*******99888776665 PP

>> GST_N_3  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0     4e-05      0.12       9      70 ..      12      76 ..       6      81 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 4e-05
                HHHHHHHHHHHHT-..-EEEE---TTTTHHHHHHH-TT--SSEEE.TTS-EEESHHHHHHHHHHH CS
     GST_N_3  9 yarrvrlaLnekgl..pvevvevtpgehdeellaknplgkvPvLe.ddgealtdSlaIidyLeel 70
                ++r v l+   k+l  +v +ve+ p + +  l ak pl+k+Pv+   +g  l +  aI++y+ e+
  EPX71923.1 12 NTRTVCLLELAKRLnlQVDLVETYPHKFPSDLAAKFPLQKLPVFIsSNGLELSELFAILRYFYEK 76
                55555555555555227888998888889999************857899999999999998876 PP

>> Tom37  Outer mitochondrial membrane transport complex protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   6.6e-05       0.2      27      84 ..      47     106 ..      15     112 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 6.6e-05
       Tom37  27 sptgeLPaLkdgegtwisgfdnIveylrkkseesdlda..slsakekadatAlisllesk 84 
                  p ++LP+ + ++g ++s++  I++y+ +k++++d+++  + +ake+a+   +is++++ 
  EPX71923.1  47 FPLQKLPVFISSNGLELSELFAILRYFYEKGKQNDTESlgGKNAKEEAEIWKWISYVNTD 106
                 5889*******99999************99866655545588999999999999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       294  (0.016398); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.54u 0.31s 00:00:00.85 Elapsed: 00:00:00.52
# Mc/sec: 1262.49
//
Query:       EPX71924.1  [L=159]
Description: frataxin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.4e-37  126.8   0.1    4.3e-37  126.5   0.1    1.1  1  Frataxin_Cyay  Frataxin-like domain


Domain annotation for each model (and alignments):
>> Frataxin_Cyay  Frataxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.5   0.1   2.4e-41   4.3e-37       1     107 [.      43     150 ..      43     151 .. 0.96

  Alignments for each domain:
  == domain 1  score: 126.5 bits;  conditional E-value: 2.4e-41
                    -HHHHHHHHHHHHHHHHHHHH.HHHHH--CTS.SEEEETTEEEEEETTS-EEEEEEEGGGTEEEEEES.SEEEEEEEET..TEEEETTTT-BHHHH CS
  Frataxin_Cyay   1 lsdeeyhkladelldsleekleelaeeaeedeldveyssgvLtiefekkgtyvinkqppnkqIWlsspisgpkrfdyde.kgeWiskrdgseLkel 95 
                    lsd eyh+lad++l+  ++++e+l ee+    +d+eyssgvLt++++++gtyvinkqpp +q+Wlssp+sgpk+++++  +++W s+rd s++ e+
     EPX71924.1  43 LSDLEYHRLADDTLEVFNNTFEDLLEESGRRDYDIEYSSGVLTLNLGDHGTYVINKQPPAHQVWLSSPVSGPKHYEWSSnNKTWKSTRDDSTISEI 138
                    5789***********************99999*********************************************998889************* PP

                    HHHHHHHHHSS- CS
  Frataxin_Cyay  96 Leeelskalgee 107
                    L++e+ +a++++
     EPX71924.1 139 LAKEIGDAFSKK 150
                    *******99886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.31s 00:00:00.82 Elapsed: 00:00:00.51
# Mc/sec: 946.98
//
Query:       EPX71925.1  [L=530]
Description: RNA metabolism pathway protein Pet127 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-98  328.5   1.4    3.3e-98  328.5   1.4    1.4  2  Pet127    Mitochondrial protein Pet127


Domain annotation for each model (and alignments):
>> Pet127  Mitochondrial protein Pet127
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0      0.31   5.5e+03      95     113 ..      59      77 ..      39     107 .. 0.57
   2 !  328.5   1.4  1.8e-102   3.3e-98       1     273 [.     108     381 ..     108     382 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 0.31
      Pet127  95 salGkslEklLtleeeefe 113
                  +l + l ++Lt ++ +f 
  EPX71925.1  59 NKLQHELNTVLTDNRFKFL 77 
                 3455555555555555444 PP

  == domain 2  score: 328.5 bits;  conditional E-value: 1.8e-102
      Pet127   1 fvtsskdkeLlelakeekkkyvsStSsltsvLsqlylllsnfrklnlsslskafee..kskkftklarlpasvilrkkekvyaidsdk...sldk.eii 93 
                 f+t+s+dk L ++  ++++k+++StSslt++Lsq++++ls++++ ++  lsk+f+   +++++t+l+r+p+sv++++++++ +id+d+   s +k ++i
  EPX71925.1 108 FYTASEDKVLKKTGYKTNSKFAGSTSSLTGLLSQIHFFLSKWKPPSFLGLSKKFRVakNENHYTRLCRSPTSVHVSYQNGLHCIDKDQsltSREKgNTI 206
                 889*************************************************99643388899*************************6653444579* PP

      Pet127  94 LsalGkslEklLtleeeefekylkkeksekakeeekkeaYnysklgkfllrsqLDcydprlpgtgvFdlKtRavvaiRydleeveketgyeikklkgef 192
                 L+++GkslE+++tl++ee+e+ylk+e+ +++ +++  ++++ysk+ ++l+rsqLDc+d  lp++gvFdlKtRav+ +R +++e+e++ +y++++ +g+f
  EPX71925.1 207 LMDIGKSLEAFFTLRREEYERYLKSENVSQKPKPQI-DVFQYSKCRSLLIRSQLDCFDRTLPNSGVFDLKTRAVLGVRLNQAEPENYDSYTLDRYYGNF 304
                 *************************97666544444.9************************************************************* PP

      Pet127 193 eSferEyydlirsalLKYslQariGqmdGifvaYHnikrifGfqYlpleeldkvlfgeeelaskladkeFklslellekll 273
                  S+erEyyd+irsa+LKYslQar+G+m+G+fvaYHn+ +ifGfqY++l+e+dk++++     ++++d+eFkls++lle++l
  EPX71925.1 305 VSYEREYYDMIRSAFLKYSLQARLGRMEGVFVAYHNTCQIFGFQYVSLKEMDKAIHW----GKNIGDAEFKLSIQLLESIL 381
                 *********************************************************....567***************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (530 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       868  (0.0484132); expected 358.6 (0.02)
Passed bias filter:                      587  (0.0327403); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.42
# Mc/sec: 3822.76
//
Query:       EPX71926.1  [L=915]
Description: hypothetical protein SOCG_03862 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.8e-52  176.3   0.0    1.1e-51  175.4   0.0    1.5  1  DNA_ligase_A_M   ATP dependent DNA ligase domain
    7.4e-26   91.5   0.0    1.8e-25   90.2   0.0    1.7  1  DNA_ligase_A_N   DNA ligase N terminus
    1.4e-15   58.0   0.0    2.5e-15   57.2   0.0    1.5  1  RNA_ligase       RNA ligase
    8.5e-13   48.8   0.0    1.9e-12   47.7   0.0    1.6  1  DNA_ligase_A_C   ATP dependent DNA ligase C terminal region
    3.2e-10   40.3   0.0    5.8e-08   33.0   0.0    2.7  2  BRCT_2           BRCT domain, a BRCA1 C-terminus domain
    1.1e-07   32.1   0.2    0.00058   20.2   0.0    3.1  3  BRCT             BRCA1 C Terminus (BRCT) domain
    1.1e-05   25.3   2.5      0.041   13.7   0.0    3.6  4  mRNA_cap_enzyme  mRNA capping enzyme, catalytic domain
  ------ inclusion threshold ------
      0.016   15.2   0.1       0.67   10.0   0.0    2.5  2  PTCB-BRCT        twin BRCT domain


Domain annotation for each model (and alignments):
>> DNA_ligase_A_M  ATP dependent DNA ligase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.4   0.0   4.8e-55   1.1e-51       1     204 []     255     463 ..     255     463 .. 0.97

  Alignments for each domain:
  == domain 1  score: 175.4 bits;  conditional E-value: 4.8e-55
                     -EEEEEES.CHHHHHHHTTTSEEEEEEEESSEEEEEEEETTEEEEEETTS-B-GG........GCHHHHHHHHHHBSTTESEEEEEEEEEEEETT CS
  DNA_ligase_A_M   1 pmLAeslk.siekalkkleekafivEiKyDGeRaqvhkegdkvklfSRrlkdita........akpelvkalkeafkkdeksvilDGElvavdke 86 
                     p+LA+  k ++  +++ +++++f++E+K+DGeR+q+h++++++++fSR+ +++t+        +  +l++ +  af++++++v+lDGE+v++d+ 
      EPX71926.1 255 PQLANFKKsTLDFVVDSMHNEPFWIEEKMDGERIQLHMSSGQFQFFSRNARTYTDvygksyhdENSKLTQYIIGAFDERVSQVVLDGEMVTWDPI 349
                     899999997888999***********************************************999****************************** PP

                     TTCBEHHHHHCHHHHCHCCTHHHHHHSEEEEEEEEEEEETTEEHTTSCHHHHHHHHHHHB--BTTTEEE--EEEESSHHHHHHHHHHHHHTTECE CS
  DNA_ligase_A_M  87 tgeilpfqklasrkkkkkkveeklkeaelclfvFDiLyldgesltdeplkeRrklLeeilkesedrvelaeslevkdveeleelleeaiseglEG 181
                      ++i+p+++l+s++++++    +  ++++ ++vFDiLyl+g+sl++++l+ R ++L++++++++ r+ ++ ++ +k+v ++++ l+++i eg+EG
      EPX71926.1 350 LETIIPYGSLRSTFDSSS----THPTYYPYYIVFDILYLNGKSLIRHSLEARYRILKKVIVRESRRMCVLSHKIGKTVGDIDKELRQTILEGSEG 440
                     *************97777....45789******************************************************************** PP

                     EEEEETT-CC-TTCEEEEEEEEE CS
  DNA_ligase_A_M 182 lvvKnpdskYepgkrsknwlKvK 204
                     lv+K+p+++Y+ g+r+++w+KvK
      EPX71926.1 441 LVIKKPSGIYRLGERMDDWIKVK 463
                     **********************9 PP

>> DNA_ligase_A_N  DNA ligase N terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.2   0.0   8.2e-29   1.8e-25       9     173 .]      33     213 ..      23     213 .. 0.85

  Alignments for each domain:
  == domain 1  score: 90.2 bits;  conditional E-value: 8.2e-29
                     HHHHCC.---HH.......HHHHHHHHHHHTS-..SHHHHHHHHHHSS-CCCS-.-----HHHHHHHHHH.HHT--HHHHHHH..........HH CS
  DNA_ligase_A_N   9 fekieestkkrl.......ekrailanffrkvesagpedlypalrLllPdydgr.eygigesllakalae.alglskkkikda..........la 84 
                     ++ki +++k+r+        kr+i++n+f k++++  +dlyp+lrL+lPd ++   ++ +       l+  a+ ls++ ++da          ++
      EPX71926.1  33 LQKIGKTRKSRNsgidpyeLKRKIISNYFTKWRQQVGDDLYPLLRLMLPDTEKEdHLDSKNLGWENFLSGfAMHLSSN-SEDAkalrnwrssdSK 126
                     567777557777999999999********888887788*************955477655555555554434556666.7787788999999877 PP

                     HHS-HHHHHHHHHCCHHHH------BHHHHHHHHHHHHH-STTHHHHHHHHHHHHHHHS-HHHHHHHHHHHCT---SS--HHHHHHHHH CS
  DNA_ligase_A_N  85 kvgDlgevaeevlskrstlakkspltieevnelLdklaaagkgsedekkkilkkllkraspeEakyliriilkdlriglsektvldala 173
                      vg++   +++vl++r  ++ +s+ ti ++n+lLd la  + +se+ +  +l+k+++++sp+E+++li i+lk  + g sek++l++++
      EPX71926.1 127 HVGNFTAMLQDVLERRAYRTFPSSFTIGDINNLLDHLA--EATSEEVRGSVLEKFYNSLSPLEMRWLIAILLKVRKYGTSEKFILSVFH 213
                     7************************************9..6678*******************************************98 PP

>> RNA_ligase  RNA ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.2   0.0   1.1e-18   2.5e-15       2     161 .]     276     463 ..     275     463 .. 0.66

  Alignments for each domain:
  == domain 1  score: 57.2 bits;  conditional E-value: 1.1e-18
                 EEEEEEE-SSEEEEEEEETT.EEEEETTCEB..CTTTHHHHHHTHHHHHHHHHHHHH....ECCEEEEEEEES......SS...TTSS........... CS
  RNA_ligase   2 evvvtEKlDGtnfriylvke.vgvasRsqil..pfgeekfkefkrwaaalrkklkekla..neelilyGElig.....hsi.kygglpk.......... 79 
                 +++++EK+DG++++++++ + ++++sR+     +++ + +++ + + +++       ++  + +++l GE+++     ++i +yg l++          
  EPX71926.1 276 PFWIEEKMDGERIQLHMSSGqFQFFSRNARTytDVYGKSYHDENSKLTQYII---GAFDerVSQVVLDGEMVTwdpilETIiPYGSLRStfdsssthpt 371
                 79****************556*********9643444444343444443333...333366567*********96666444888775556788888899 PP

                 ...EEEEEEEEEEECTTBECE--HHHH.HHHHHCCT.....B..EEEEE.SS...HHHHHCCC.HHHHTC--EEEEEESSSSBE.TTE.BSEEEEE CS
  RNA_ligase  80 ...efyvFdifdirdkeeqrylspdev.ealakglg.....tvpvlyegkfl...aaeellelllskgnkrEGlVikpeselyk.nkg.raifKvk 161
                    +++vFdi+ +++k +    s +++ ++l+k +      ++ + ++ +++   + +el+++     + +EGlVik +s++y+  ++ ++++Kvk
  EPX71926.1 372 yypYYIVFDILYLNGK-SLIRHSLEARyRILKKVIVresrrMCVLSHKIGKTvgdIDKELRQT---ILEGSEGLVIKKPSGIYRlGERmDDWIKVK 463
                 99999******99854.4444444444366666221233332222223333334333333333...3458****************99******98 PP

>> DNA_ligase_A_C  ATP dependent DNA ligase C terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.7   0.0   8.3e-16   1.9e-12       3      99 .]     490     605 ..     488     605 .. 0.86

  Alignments for each domain:
  == domain 1  score: 47.7 bits;  conditional E-value: 8.3e-16
                     GSEEEEEEEEEE........TTEEEEEEEE-SS--HHHHHHHHHHHG....GGEECTTCE...SS---HHHHTTEEE-TT-..EEEEEESEEECT CS
  DNA_ligase_A_C   3 glvgslllgvyd........dgkleyvgkvgtGfsdaeleelrkklk....elerkkppf...aekvpeeekrdvWvePel..vveVkfaeitas 80 
                     ++ +s+l+g++          ++++++++vg Gf+  +++ +rk+ +    +++ +  +f   a++ +e ek+d W++Pe+  v+++k+ae+ as
      EPX71926.1 490 KQASSFLCGLRIdhapgerpYQRFQSFVRVGGGFTYFDRDIIRKETDgkwkPWSSEALEFfelAGSRQEFEKPDLWIHPEDapVLQIKAAEVVAS 584
                     677999***76656665555566***********************9988888888888889988888999999*****985577********** PP

                     SSSTT..EECT-EEEEE-TTS CS
  DNA_ligase_A_C  81 gkyka..slRfPrfkrlReDk 99 
                     +++k+  +lRfPr++++R D+
      EPX71926.1 585 NRFKTtyTLRFPRLEKIRLDR 605
                     ******************995 PP

>> BRCT_2  BRCT domain, a BRCA1 C-terminus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.0   0.0   2.6e-11   5.8e-08       2      85 .]     664     754 ..     663     754 .. 0.86
   2 ?    4.3   0.0     0.023        52      18      69 ..     841     903 ..     818     905 .. 0.81

  Alignments for each domain:
  == domain 1  score: 33.0 bits;  conditional E-value: 2.6e-11
      BRCT_2   2 sklFeglrFYin.daepspsreklkklIeknGGevvetitsa...vyiviaesneee...laekrkrrvvspkyIkdCikkgkllplenyl 85 
                 s++F++l+F +   ++ ++s+++l+ +I++nGG++ + its    ++i++a + +     +++k    +++p++I d+ +kgk +  ++yl
  EPX71926.1 664 SNIFQDLHFVVLpPSKIGKSKQELENMIISNGGTIHQAITSVpkgQMILLADKISARvlvEEKKGMCSIYQPEWIIDSTNKGKKVTERPYL 754
                 79*********87667779****************88884433347888888887779999999999****************99999986 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.023
      BRCT_2  18 spsreklkklIek.nGGevvetitsa.vyiviaesneee.........laekrkrrvvspkyI 69 
                 ++s+++l+k I + nG  +++t +s+  +++i  sn+++         + ++ ++++v+++++
  EPX71926.1 841 RNSQYHLAKTILSwNGASIQSTFSSKeLTHIIMFSNDQDrvrylqqacEFHQINPEIVNYQWL 903
                 46788888888873566777777666588889999988899**9999989999999****997 PP

>> BRCT  BRCA1 C Terminus (BRCT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.0         8   1.8e+04      33      48 ..     312     327 ..     310     329 .. 0.77
   2 !   20.2   0.0   2.6e-07   0.00058       3      77 ..     664     740 ..     662     742 .. 0.84
   3 !    8.8   0.0   0.00094       2.1      25      78 ..     845     906 ..     819     907 .. 0.72

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 8
                 TCEEESSCSTTSSEEE CS
        BRCT  33 GGkvttevskktthlv 48 
                 G ++++e+sk t++++
  EPX71926.1 312 GKSYHDENSKLTQYII 327
                 6677888888888887 PP

  == domain 2  score: 20.2 bits;  conditional E-value: 2.6e-07
                 TTTTTTEEEEE.EESTSSHHHHHHHHHHHHTTCEE...ESSCSTTSSEEEESSSHSHHHHHHHHHHTTSEEEETHHHHH CS
        BRCT   3 ellfhgckfvi.tgvldnftrdeleelikehGGkv...ttevskktthlvvgepesrslkylealklnipivheewlld 77 
                 +++f++++fv+ + ++ +  ++ele++i ++GG++    t+v k + +l++++       + e +k +  i  +ew+ d
  EPX71926.1 664 SNIFQDLHFVVlPPSKIGKSKQELENMIISNGGTIhqaITSVPKGQMILLADKI--SARVLVEEKKGMCSIYQPEWIID 740
                 79*********************************7777777777888888888..66677777777888888888877 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.00094
                 H...HHHHHHTTCEE.ESSCSTTSSEEEESSS....HSHHHHHHHHHHTTSEEEETHHHHHH CS
        BRCT  25 l...eelikehGGkv.ttevskktthlvvgep....esrslkylealklnipivheewlldc 78 
                 +   ++++  +G+++ +t  sk+ th+++ ++     +  +   e  + n +iv+ +wll +
  EPX71926.1 845 YhlaKTILSWNGASIqSTFSSKELTHIIMFSNdqdrVRYLQQACEFHQINPEIVNYQWLLRL 906
                 1555899999*****777779*******988833333333335555677999******9976 PP

>> mRNA_cap_enzyme  mRNA capping enzyme, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.0   0.00077       1.7      12      80 ..     271     344 ..     266     355 .. 0.84
   2 !   13.7   0.0   1.8e-05     0.041      91     124 ..     374     407 ..     362     447 .. 0.89
   3 ?    0.1   0.3      0.28   6.2e+02      45      73 ..     626     653 ..     620     654 .. 0.84
   4 ?   -2.3   0.0       1.5   3.4e+03      71      96 ..     729     756 ..     719     758 .. 0.77

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00077
                      HHHHS-EEEEEEESSEEEEEEEEECTEEEEEEETTS-EE.EESSST-BTTSSSST......CTSBGGSEEEEEEEE CS
  mRNA_cap_enzyme  12 kLkqkkYvvseKaDGiRylmllteeeegvylidRenevy.rvenlrfprekdkek......lekvldetllDgElv 80 
                       ++++++ + eK DG R+ + + +   +  ++ R+ + y  v  +++  e+ k         ++  ++ +lDgE+v
       EPX71926.1 271 SMHNEPFWIEEKMDGERIQLHMSSG--QFQFFSRNARTYtDVYGKSYHDENSKLTqyiigaFDERVSQVVLDGEMV 344
                      57789999***************99..578999999887369999999999876556666667888999******9 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 1.8e-05
                      EEEEEEEEEEETTEEGTTSBHHHHHHHHHHHTHH CS
  mRNA_cap_enzyme  91 lryliyDivaingvtvaeeplskRleilkkelik 124
                      + y+++Di+ +ng+++  + l+ R++ilkk ++ 
       EPX71926.1 374 PYYIVFDILYLNGKSLIRHSLEARYRILKKVIVR 407
                      679***************************9875 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.28
                      TTS-EEEESSST-BTTSSSSTCTSBGGSE CS
  mRNA_cap_enzyme  45 Renevyrvenlrfprekdkeklekvldet 73 
                       e +vy+ve++r + +k k++++k+l++t
       EPX71926.1 626 QEKDVYHVEKKRKVSKK-KQPEKKLLHQT 653
                      67899****99999988.68888888877 PP

  == domain 4  score: -2.3 bits;  conditional E-value: 1.5
                      GSEEEEEEEEEEECTT..CEEEEEEEEE CS
  mRNA_cap_enzyme  71 detllDgElvidkvee..kkkelryliy 96 
                      + ++   E +id  ++  k +e+ yl++
       EPX71926.1 729 MCSIYQPEWIIDSTNKgkKVTERPYLLF 756
                      567778899***9999756667779998 PP

>> PTCB-BRCT  twin BRCT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.1     0.077   1.7e+02      11      31 ..     682     702 ..     679     704 .. 0.85
   2 ?   10.0   0.0    0.0003      0.67      13      43 ..     845     876 ..     838     890 .. 0.81

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.077
                 TCHHHHHHHHHHTT-EEESSE CS
   PTCB-BRCT  11 ddrkslqklieamGaeyskdl 31 
                 +++++l+++i ++G+++++  
  EPX71926.1 682 KSKQELENMIISNGGTIHQAI 702
                 67899***********98765 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.0003
                 HHHHHHHHHHTT-EEESSE.ETT-SEEEECSS CS
   PTCB-BRCT  13 rkslqklieamGaeyskdl.tksvTHLicksg 43 
                  + ++++++ +Ga+++ ++ +k++TH i  s 
  EPX71926.1 845 YHLAKTILSWNGASIQSTFsSKELTHIIMFSN 876
                 4556777888******************8665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (915 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       646  (0.036031); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.69u 0.29s 00:00:00.98 Elapsed: 00:00:00.43
# Mc/sec: 6369.49
//
Query:       EPX71927.1  [L=341]
Description: uracil DNA N-glycosylase Ung1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.9e-21   75.1   0.1    9.4e-21   74.4   0.1    1.3  1  UDG       Uracil DNA glycosylase superfamily


Domain annotation for each model (and alignments):
>> UDG  Uracil DNA glycosylase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.4   0.1   5.2e-25   9.4e-21       6     151 ..     132     288 ..     127     291 .. 0.90

  Alignments for each domain:
  == domain 1  score: 74.4 bits;  conditional E-value: 5.2e-25
                 TT-SEEEEESSTCHH.HHHHSSSS.-STT.--HHHHHHH.CCCCCCCHHG.............CTEEEEESSS....SEC.GCTTCCCCTCCHH.HHHH CS
         UDG   6 pdakvvivGeaPgae.edatglpFsgrag.nllrkllne.aglkrdlese.............qgvyitnvvkcrppgnr.dtptsaeikacap.llee 86 
                  +++v+i+G++P+++ ++a+gl+Fs+r+g   +++lln+   +k d+e++             qgv+++n+ +    + r ++  s++   +++ ++ +
  EPX71927.1 132 SKVRVIILGQDPYHNvGQAHGLCFSVRPGvPCPPSLLNIyKAIKIDYEDFvipktgylipwadQGVLMLNASL----TVRaHQAASHS-GKGWErFTTA 225
                 5799*************************667779***999999998888***********************....86667888888.8999999999 PP

                 HHHHHH.....SSEEEEESHHHHHH..HHHHSCESCCCSCT.SEEEEES-SSTTTTT..TTTSHHHHHHHHH CS
         UDG  87 eiellk.....prlivllGktaakallgeklgklrgklleakirvlplphPsplnrn..ffksnpelkaeaw 151
                  +++         +++++G+ a+k+l        +g  l+  ++vl++ hPspl+++  ff++ +++k++ w
  EPX71927.1 226 ALQIALnkhkrGIVVLAWGTPANKRL--------QGLPLQS-HCVLKSVHPSPLSAHrgFFECHHFKKTNDW 288
                 888776679866679**********7........8888888.*****************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (341 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       495  (0.0276089); expected 358.6 (0.02)
Passed bias filter:                      315  (0.0175693); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2589.24
//
Query:       EPX71928.1  [L=138]
Description: sporulation specific protein Spo13 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.2e-10   40.4  10.8    2.2e-10   40.4  10.8    2.0  2  Sec2p           GDP/GTP exchange factor Sec2p
     0.0098   14.8  12.4      0.011   14.7  12.4    1.1  1  Spc7            Spc7 kinetochore protein
  ------ inclusion threshold ------
       0.17   11.6   6.0       0.18   11.6   4.3    2.0  2  Synaptonemal_3  Synaptonemal complex central element protein 
       0.23   11.5  13.4       0.28   11.2  13.4    1.1  1  DUF1640         Protein of unknown function (DUF1640)
        2.3    9.2   6.6        2.5    9.1   1.0    2.1  2  DUF4284         Immunity protein 22
        2.8    7.7  12.5        3.5    7.3  12.5    1.0  1  AAA_11          AAA domain
        3.3    7.6   5.3         83    3.1   5.3    2.1  1  DUF2721         Protein of unknown function (DUF2721)
        5.7    6.7  11.1        1.9    8.2   5.5    1.9  2  FTO_CTD         FTO C-terminal domain
        6.4    6.2  14.1         11    5.5  14.1    1.4  1  Exonuc_VII_L    Exonuclease VII, large subunit


Domain annotation for each model (and alignments):
>> Sec2p  GDP/GTP exchange factor Sec2p
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   2.9     0.047        94      33      60 ..      35      63 ..       9      64 .. 0.77
   2 !   40.4  10.8   1.1e-13   2.2e-10       2      69 ..      48     115 ..      47     124 .. 0.81

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.047
                HHHHHHHHHHHHHHHHHHH.HHHHHHHHT CS
       Sec2p 33 eANkmVaaarkekealekk.neklkeqLk 60
                 AN+m  +  ke+ + e++  e+l++qL+
  EPX71928.1 35 KANSMALNQMKEQLSHEVQrREELESQLE 63
                68888888887776666431456777775 PP

  == domain 2  score: 40.4 bits;  conditional E-value: 1.1e-13
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHC.HCCCHC CS
       Sec2p   2 lkeekkkreeaekekkklekEledLtasLFeeANkmVaaarkekealekkneklkeqLkeke.tllesl 69 
                 l++e ++ree e++ +k +kE+edL+ sLF eAN+mV++ar+e+e l+++ +  +e+++e + + l++ 
  EPX71928.1  48 LSHEVQRREELESQLEKSQKEMEDLSVSLFTEANEMVSNARQETEVLRRELDY-HEKMQERRmQKLKNI 115
                 78999**************************************9999887765.444444430345554 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7  12.4   5.5e-06     0.011     174     285 ..      15     122 ..       3     138 .] 0.70

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 5.5e-06
        Spc7 174 eekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleeki.eelkeqkseleeeiaeaervleeckgwsesevsrl 271
                 ++k++++++l  +++ +  +++ ++  L++++e+l+   +  ee++ +l++ q+++e+l+ ++ +e++e  s++++e++  +r l+ +++++    +r 
  EPX71928.1  15 SNKENVNDKLVPEKQ-KSPVNKANSMALNQMKEQLSHEVQRREELESQLEKSQKEMEDLSVSLfTEANEMVSNARQETEVLRRELDYHEKMQ----ERR 108
                 567888999999999.55689999**********************************9988624555555555555555555555555555....555 PP

        Spc7 272 keevkaleeltgwk 285
                 ++++k++++    +
  EPX71928.1 109 MQKLKNIQSAIRTS 122
                 55555555554444 PP

>> Synaptonemal_3  Synaptonemal complex central element protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   4.3   9.2e-05      0.18      15      48 ..      52      85 ..      26     104 .. 0.81
   2 ?   -1.3   0.0      0.99     2e+03      26      31 ..     102     107 ..      85     125 .. 0.51

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 9.2e-05
  Synaptonemal_3 15 skeslqlnkdleklteqmedvsvkltwmaydmvv 48
                     +   +l+ +lek   +med+sv l   a +mv 
      EPX71928.1 52 VQRREELESQLEKSQKEMEDLSVSLFTEANEMVS 85
                    33456899*******************9999994 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.99
  Synaptonemal_3  26 eklteq 31 
                     ek+ e+
      EPX71928.1 102 EKMQER 107
                     444442 PP

>> DUF1640  Protein of unknown function (DUF1640)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2  13.4   0.00014      0.28      19     114 ..      29     127 ..      11     130 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00014
     DUF1640  19 qAeaimsaltevlneslekvakslvskselekseylqkaalselrkevqisersefaalrseteklqrel...eklkqkLreeidklkadirldlnleK 114
                 q   + +a + +ln+  e++++++  ++ele+++ + + +++ l   + + + + +++ r+ete l+rel   ek++++ ++++++++++ir  + ++K
  EPX71928.1  29 QKSPVNKANSMALNQMKEQLSHEVQRREELESQLEKSQKEMEDLSVSLFTEANEMVSNARQETEVLRRELdyhEKMQERRMQKLKNIQSAIRTSMVNRK 127
                 55556667778999*******************************************************944458999999999999999999888877 PP

>> DUF4284  Immunity protein 22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   1.0    0.0012       2.5      58     111 ..       6      57 ..       2      63 .. 0.82
   2 ?    3.8   0.8     0.053   1.1e+02      52      86 ..      84     116 ..      53     137 .. 0.50

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.0012
     DUF4284  58 dieellekvsldseiieklkeklkekklnkanavillydkeyseitekkaedne 111
                 +i  l++ +s+++++++kl  + ++  +nkan++ l   ke  +++++ ++ +e
  EPX71928.1   6 QITRLFNSMSNKENVNDKLVPEKQKSPVNKANSMALNQMKE--QLSHEVQRREE 57 
                 6889******************************9888877..55565555544 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.053
     DUF4284  52 leteaedieellekvsldseiieklkeklkekkln 86 
                 + ++ ++ e l  ++ + ++++e  ++kl  k+++
  EPX71928.1  84 VSNARQETEVLRRELDYHEKMQERRMQKL--KNIQ 116
                 22344444555556666666666666666..4444 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3  12.5    0.0018       3.5      89     195 ..       6     126 ..       2     128 .. 0.64

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0018
      AAA_11  89 kivRvgneeeriseavksvsleekvekrlekee.......kaqlakeiskeleklakelrafeeeeek............eklkkskekskskleqerr 168
                 +i R+ n+  + +e+v++  + ek+++  +k +       k ql++e++++ e+l+++l+++++   +            ++   +++++ + l++e++
  EPX71928.1   6 QITRLFNSM-SNKENVNDKLVPEKQKSPVNKANsmalnqmKEQLSHEVQRR-EELESQLEKSQK---EmedlsvslfteaNEMVSNARQETEVLRRELD 99 
                 577788877.55666666666666666665555555344333333333333.223333333333...14458999998776777777777888888888 PP

      AAA_11 169 klkkerkelskeleeaeesleeevlde 195
                  ++k +++  ++l++++++++++++++
  EPX71928.1 100 YHEKMQERRMQKLKNIQSAIRTSMVNR 126
                 889999999999999999999999987 PP

>> DUF2721  Protein of unknown function (DUF2721)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   5.3     0.041        83      11      74 ..      37     123 ..      35     130 .. 0.62

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.041
     DUF2721  11 igllllvltnRlariadrirqLedeleelaeeeee.deelake......................iknlrrRarlirrailllvlsa 74 
                  +  l+ +  +l++ ++r ++Le++le++++e e+ + +l +e                       k+ +rR++ +++ + ++ +s+
  EPX71928.1  37 NSMALNQMKEQLSHEVQRREELESQLEKSQKEMEDlSVSLFTEanemvsnarqetevlrreldyhEKMQERRMQKLKNIQSAIRTSM 123
                 566778888888888888888888887776666553333333355555555555555444444433456777777777777666665 PP

>> FTO_CTD  FTO C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.5     0.068   1.3e+02      75     127 ..       7      58 ..       4      61 .. 0.74
   2 ?    8.2   5.5   0.00098       1.9      77     139 ..      61     123 ..      56     128 .. 0.93

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.068
     FTO_CTD  75 ieeLeeawkkmElltrlvLdalrkasetleteeeildvllelLeerqelReew 127
                 i+ L ++ ++ E + ++ L+  +++s  +++++ +l+++ e L +  ++Ree 
  EPX71928.1   7 ITRLFNSMSNKENV-NDKLVPEKQKSPVNKANSMALNQMKEQLSHEVQRREEL 58 
                 55566666666654.45666778888889999999999999999999999985 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.00098
     FTO_CTD  77 eLeeawkkmElltrlvLdalrkasetleteeeildvllelLeerqelReewaartrskafeel 139
                 +Le++ k+mE l++ ++++++++ +++++e+e+l   l   e++qe+R++  + ++s +  ++
  EPX71928.1  61 QLEKSQKEMEDLSVSLFTEANEMVSNARQETEVLRRELDYHEKMQERRMQKLKNIQSAIRTSM 123
                 79999***********************************************99999988777 PP

>> Exonuc_VII_L  Exonuclease VII, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5  14.1    0.0053        11     162     235 ..      39     115 ..       5     135 .. 0.40

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0053
  Exonuc_VII_L 162 rlleekkqrleklasrlkspeellerkrqrldeleerleralkkqlkkkrerleelkerlk...ekleekkerlkkl 235
                    +l++ k++l++  +r ++ e++le++++++++l+ +l ++ ++ ++++r+++e l+++l    +  e++ ++lk++
    EPX71928.1  39 MALNQMKEQLSHEVQRREELESQLEKSQKEMEDLSVSLFTEANEMVSNARQETEVLRRELDyheKMQERRMQKLKNI 115
                   22233333333333333333334444444444444444444444444444444444433321211111111111221 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2997  (0.167159); expected 358.6 (0.02)
Passed bias filter:                      596  (0.0332422); expected 358.6 (0.02)
Passed Vit filter:                        71  (0.00396006); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.51u 0.29s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 946.51
//
Query:       EPX71929.1  [L=1676]
Description: U3 snoRNP-associated protein Rrp5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.4e-64  211.7  28.5    7.1e-12   45.5   1.0   11.7 11  S1             S1 RNA binding domain
    1.8e-11   44.6   0.2    3.7e-09   37.0   0.1    4.6  5  Suf            Suppressor of forked protein (Suf)
      7e-07   29.7   0.0       0.05   14.1   0.0    3.4  3  TPR_19         Tetratricopeptide repeat
    2.4e-06   27.9   0.0       0.17   12.8   0.0    4.3  5  TPR_14         Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.019   14.2   0.1        1.5    7.9   0.0    2.5  3  TPR_15         Tetratricopeptide repeat
      0.023   15.3   1.1       0.75   10.6   0.0    3.9  5  TPR_6          Tetratricopeptide repeat
      0.035   14.7   0.0        2.6    8.7   0.0    2.9  3  TPR_16         Tetratricopeptide repeat
      0.081   12.9   0.1         16    5.5   0.1    3.7  3  RNase_II_C_S1  RNase II-type exonuclease C-terminal S1 domain


Domain annotation for each model (and alignments):
>> S1  S1 RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   0.0   0.00013      0.29       5      63 ..     117     201 ..     114     207 .. 0.89
   2 !    7.2   0.1    0.0028       6.4       5      37 ..     235     268 ..     232     287 .. 0.92
   3 !   11.8   0.0    0.0001      0.23       9      51 ..     412     458 ..     409     480 .. 0.78
   4 !   23.1   0.3   3.1e-08     7e-05       3      75 .]     497     568 ..     495     568 .. 0.95
   5 !   35.4   0.0   4.4e-12   9.8e-09      13      75 .]     596     657 ..     588     657 .. 0.93
   6 !   18.2   0.4     1e-06    0.0023       5      74 ..     675     747 ..     672     748 .. 0.76
   7 ?    2.8   0.0     0.066   1.5e+02      31      74 ..     779     821 ..     771     822 .. 0.93
   8 !   15.3   0.3   8.6e-06     0.019       4      67 ..     857     924 ..     854     929 .. 0.91
   9 !   30.4   0.0   1.7e-10   3.7e-07       3      75 .]    1043    1114 ..    1041    1114 .. 0.97
  10 !   19.5   0.0   4.1e-07   0.00092       2      74 ..    1136    1207 ..    1135    1208 .. 0.95
  11 !   45.5   1.0   3.2e-15   7.1e-12       2      74 ..    1225    1298 ..    1224    1299 .. 0.96

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00013
                 TCEEEEEEEEEETTEEEEEETTTEEEEEEGGGSSSS..........................CEESCHHHCEETTEEEEEEEEEE CS
          S1   5 gevveGeVtsvtkgGafVelgngvegfvpaselsrd..........................arvedpdevlkvGdevkvkvlkv 63 
                 g+ + G +++++   + V l ng +g+vp+ ++s +                          +  +d  + ++vG+ v+v v+k+
  EPX71929.1 117 GALLLGQISQINTLDLAVSLPNGLTGYVPITSISEKlsqrlenlddaatdadneavehldefNNFPDLIDLYHVGQYVRVCVTKL 201
                 6778899*****************************9999999999999999999999999988889999999999999999987 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0028
                 TCEEEEEEEEEETTEEEEEET.TTEEEEEEGGGS CS
          S1   5 gevveGeVtsvtkgGafVelg.ngvegfvpasel 37 
                 g  +++ V+sv+++G+  ++g  + +gf++++++
  EPX71929.1 235 GSTIQAAVSSVEDHGIVFDVGlKNFTGFLSKKNV 268
                 8899*************************99987 PP

  == domain 3  score: 11.8 bits;  conditional E-value: 0.0001
                 EEEEEEEET.TEEEEEET.TTEEEEEEGGGSSSS..CEESCHHHCEE CS
          S1   9 eGeVtsvtk.gGafVelg.ngvegfvpaselsrd..arvedpdevlk 51 
                 +++Vt v++  G+f ++g  g+ gf ++s ls++  a v+ ++  +k
  EPX71929.1 412 TAKVTYVSPsLGVFCDVGiPGINGFTHISRLSDKkvANVSANNGPYK 458
                 689******99**********************96644555555555 PP

  == domain 4  score: 23.1 bits;  conditional E-value: 3.1e-08
                 TTTCEEEEEEEEEETTEEEEEETTTEEEEEEGGGSSSSCEESCHHHCEETTEEEEEEEEEEETTTTEEEEEEC CS
          S1   3 ekgevveGeVtsvtkgGafVelgngvegfvpaselsrdarvedpdevlkvGdevkvkvlkvdkdrrriilsik 75 
                 ++g+ veG V ++ + G+ + +  g+ ++vp s++s+    + p++++kvG +vk +vl ++  rrr+i+++k
  EPX71929.1 497 KVGQHVEGSVLKLIPQGIVITVADGINALVPSSHMSDI-ALQFPERRFKVGTTVKGRVLTTNTLRRRVIVTLK 568
                 79**********************************98.99***************************99875 PP

  == domain 5  score: 35.4 bits;  conditional E-value: 4.4e-12
                 EEEETTEEEEEETTTEEEEEEGGGSSSSCEESCHHHCEETTEEEEEEEEEEETTTTEEEEEEC CS
          S1  13 tsvtkgGafVelgngvegfvpaselsrdarvedpdevlkvGdevkvkvlkvdkdrrriilsik 75 
                  +v ++Ga+Ve+ n v+gf+p+se+s    ++d  e++k+G++v v +l ++  +r++++s++
  EPX71929.1 596 ARVLEDGAIVEFYNSVRGFLPVSEMSEA-YIRDAREHFKIGQTVSVTILSCEPSERKMRVSCR 657
                 577889********************98.9*****************************9986 PP

  == domain 6  score: 18.2 bits;  conditional E-value: 1e-06
                 TCEEEEEEEEEETTEEEEEETTTEEEEEEGGGSSSS.....CEESCHHHCEETTEE.EEEEEEEEETTTTEEEEEE CS
          S1   5 gevveGeVtsvtkgGafVelgngvegfvpaselsrd.....arvedpdevlkvGde.vkvkvlkvdkdrrriilsi 74 
                 g  v+G V + t++ ++V+lgn+v+g + +s+ls+          +   +l+v  +  +v+vl+   d+r+i ls+
  EPX71929.1 675 GSLVSGSVLQKTEDSVIVDLGNKVSGVIALSHLSDGdltksT---KVMNKLRVSTKlSDVVVLRKGQDKRNITLSL 747
                 7789******************************87774333...3333444443314688888888888888876 PP

  == domain 7  score: 2.8 bits;  conditional E-value: 0.066
                 EEEGGGSSSSCEESCHHHCEETTEEEEEEEEEEETTTTEEEEEE CS
          S1  31 fvpaselsrdarvedpdevlkvGdevkvkvlkvdkdrrriilsi 74 
                 +vp++ ls d  v++p+  +k+ + v+ + l v+ + ++i +s 
  EPX71929.1 779 LVPKAYLSED-YVPVPGALFKPQQSVECVCLSVNLQQKKIFMSF 821
                 799*******.9****************************9996 PP

  == domain 8  score: 15.3 bits;  conditional E-value: 8.6e-06
                 TTCEEEEEEEEEETTEEEEEETTTEEEEEEGGGSSSS....CEESCHHHCEETTEEEEEEEEEEETTT CS
          S1   4 kgevveGeVtsvtkgGafVelgngvegfvpaselsrd....arvedpdevlkvGdevkvkvlkvdkdr 67 
                 +g++  G++tsv    + V l ++v+g v +se+ ++        +p + +k+Gd+v+v+vl++++ r
  EPX71929.1 857 AGKITWGIITSVKASQLNVVLAANVQGRVEVSEVFDKaediENFNKPLKNFKKGDKVRVRVLGIRDSR 924
                 688888*******************************9998667799****************99876 PP

  == domain 9  score: 30.4 bits;  conditional E-value: 1.7e-10
                  TTTCEEEEEEEEEETTEEEEEETTTEEEEEEGGGSSSSCEESCHHHCEETTEEEEEEEEEEETTTTEEEEEEC CS
          S1    3 ekgevveGeVtsvtkgGafVelgngvegfvpaselsrdarvedpdevlkvGdevkvkvlkvdkdrrriilsik 75  
                  + g+ + G Vt++++ Ga+V+l ++ +g v++ ++s+d  +  p++++  ++ + v v+ vd+ +++i+ls++
  EPX71929.1 1043 KPGDKLLGRVTNINESGAIVYLPGHLSGRVSRLDMSDD-YDIAPSQKFVRNKYISVCVISVDVSNKKIALSTR 1114
                  789***********************************.9*******************************97 PP

  == domain 10  score: 19.5 bits;  conditional E-value: 4.1e-07
                  STTTCEEEEEEEEEETTEEEEEETTTEEEEEEGGGSSSSCEESCHHHCEETTEEEEEEEEEEETTTTEEEEEE CS
          S1    2 pekgevveGeVtsvtkgGafVelgngvegfvpaselsrdarvedpdevlkvGdevkvkvlkvdkdrrriilsi 74  
                  ++ g+v  G Vt+v + G+fV lg +  + v ++el +   +++ +++++v+  v+ k+l vd d +r+ +++
  EPX71929.1 1136 VKPGDVCRGFVTNVADQGLFVLLGHDLVARVKIAELFDS-FIKEWKTQFQVNMLVRGKLLSVDHDSKRMEMTL 1207
                  578***********************************9.***************************998876 PP

  == domain 11  score: 45.5 bits;  conditional E-value: 3.2e-15
                  STTTCEEEEEEEEEETTEEEEEET..TTEEEEEEGGGSSSSCEESCHHHCEETTEEEEEEEEEEETTTTEEEEEE CS
          S1    2 pekgevveGeVtsvtkgGafVelg..ngvegfvpaselsrdarvedpdevlkvGdevkvkvlkvdkdrrriilsi 74  
                  +++g+ v+G+V +v+++G+ + ++   g+ g++++se+++   v d+++ ++vGd+v++ vl+v+ ++rr++l +
  EPX71929.1 1225 LQVGTNVDGTVAKVEDYGLLIKIDstDGIIGLCHKSEVADA-VVNDIGKLYSVGDKVRAHVLDVNPEKRRVALGL 1298
                  5899***********************************98.9****************************9986 PP

>> Suf  Suppressor of forked protein (Suf)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.2   0.4       5.7   1.3e+04     231     241 ..      76      86 ..      14     107 .. 0.49
   2 ?   -3.8   6.4       4.5     1e+04     177     251 ..    1317    1396 ..    1298    1427 .. 0.49
   3 !    4.9   0.3    0.0098        22      73     122 ..    1430    1481 ..    1416    1490 .. 0.80
   4 !   15.5   0.0   5.9e-06     0.013      53     122 ..    1516    1584 ..    1510    1584 .. 0.90
   5 !   37.0   0.1   1.6e-12   3.7e-09      41     138 ..    1575    1671 ..    1573    1675 .. 0.93

  Alignments for each domain:
  == domain 1  score: -4.2 bits;  conditional E-value: 5.7
         Suf 231 eqqrksessks 241
                 ++ ++++s+k+
  EPX71929.1  76 TKTSNKPSKKK 86 
                 11111111111 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 4.5
         Suf  177 qkkee..qaasleeskvpqaqeskkrklesedssvkkPdklqmvespk...........kgaagrrleqqrksessksaeaasksqka 251 
                  +k+++  + +++ee+++++ + +++ + ++ed++ + P  l+ + ++            +       +++++++  + +++++k+ k+
  EPX71929.1 1317 MKSADesSDEEMEEDQQSELEADERSSSDEEDEK-PAPAPLNVNGFDWgdsstvfdkpaH-------DESESENEDEEETPKRKKSKH 1396
                  2222222445555556666666666666666655.6666666666655555433332221.......222222222222222222222 PP

  == domain 3  score: 4.9 bits;  conditional E-value: 0.0098
         Suf   73 vlkYldyLislnddnnaRvlfekvvsklskeke..akelykkfleyestfgd 122 
                   + Y+ y ++ln++++aR + +++++++   +e    +++   l+ e  +g 
  EPX71929.1 1430 WISYMAYQLNLNEVEKAREIGQRALTTINYREEeeKLNVWMALLNLEIAYGT 1481
                  578************************8766653367789999999998885 PP

  == domain 4  score: 15.5 bits;  conditional E-value: 5.9e-06
         Suf   53 kvAtkIFelGlKkFpedeefvlkYldyLislnddnnaRvlfekvvsklskekeakelykkfleyestfgd 122 
                  ++A++  e  lK+F++ +   ++Y ++L+    +++aR l+++++++l k +   ++++kf+  e ++gd
  EPX71929.1 1516 DLANEYMEGMLKNFKQVPSVWIQYASFLLTNGSEDTARGLLQRSLQSLPKSE-HVKMIEKFAILEFKQGD 1584
                  56777778889****************************************9.99999***999998887 PP

  == domain 5  score: 37.0 bits;  conditional E-value: 1.6e-12
         Suf   41 sAllEyyiskdkkvAtkIFelGlKkFpedeefvlkYldyLislnddnnaRvlfekvvsk.lskekeakelykkfleyestfgdlssilklekRmeel 136 
                  +A+lE+  + d++ ++ IFe  l ++p+  +  +  +d  i+  d+  +R lfe+v+++ ls +k ak ++kk+l ye+++gd + + ++ ++  e+
  EPX71929.1 1575 FAILEFK-QGDPERGRTIFEGLLSNYPKRLDLWNVLIDMEIKQGDTAIIRRLFERVLASkLSTKK-AKFIFKKWLTYEKEIGDNKGVESVKQKALEY 1669
                  799****.999999*******************************************88477777.***************************9998 PP

         Suf  137 fp 138 
                  ++
  EPX71929.1 1670 VS 1671
                  76 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.18   3.9e+02      14      49 ..    1416    1451 ..    1402    1456 .. 0.74
   2 !   14.1   0.0   2.2e-05      0.05       1      62 [.    1509    1570 ..    1509    1573 .. 0.94
   3 !    9.6   0.0   0.00059       1.3       2      41 ..    1580    1619 ..    1579    1620 .. 0.95

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.18
      TPR_19   14 leqalqedpknaearllLAeallalgqldeAealLd 49  
                  +e+ l  +p+++ +++ ++  +l+l+++++A+++ +
  EPX71929.1 1416 FERQLLSSPNSSFLWISYMAYQLNLNEVEKAREIGQ 1451
                  555566678888888888999***********9855 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 2.2e-05
      TPR_19    1 llaegdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpddarya 62  
                  l+++++++ A +++e +l+   + + +++++A  ll +g  d A+ lL++ +++ p+++ ++
  EPX71929.1 1509 LIKSNKLDLANEYMEGMLKNFKQVPSVWIQYASFLLTNGSEDTARGLLQRSLQSLPKSEHVK 1570
                  678899999************************************************88876 PP

  == domain 3  score: 9.6 bits;  conditional E-value: 0.00059
      TPR_19    2 laegdyaeAlalleqalqedpknaearllLAeallalgql 41  
                  +++gd+++   ++e +l+ +pk ++++  L++  +++g++
  EPX71929.1 1580 FKQGDPERGRTIFEGLLSNYPKRLDLWNVLIDMEIKQGDT 1619
                  68************************************86 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       7.1   1.6e+04       4      28 ..    1430    1454 ..    1429    1456 .. 0.82
   2 ?   -0.4   0.0       1.3     3e+03       2      31 ..    1467    1496 ..    1466    1501 .. 0.91
   3 !   12.8   0.0   7.5e-05      0.17       2      35 ..    1534    1567 ..    1533    1572 .. 0.90
   4 !    8.7   0.0    0.0015       3.4       8      42 ..    1576    1610 ..    1574    1612 .. 0.90
   5 ?   -0.3   0.0       1.2   2.6e+03       4      29 ..    1606    1631 ..    1604    1633 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 7.1
      TPR_14    4 llalaeallalGdpdeAiallrral 28  
                  +  + ++ l+l + ++A+++ +ral
  EPX71929.1 1430 WISYMAYQLNLNEVEKAREIGQRAL 1454
                  56677888999*******9988887 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 1.3
      TPR_14    2 eallalaeallalGdpdeAiallrralala 31  
                  ++++al+ ++ a G  ++  + +++a+a++
  EPX71929.1 1467 NVWMALLNLEIAYGTNETLQNTFKDACAHC 1496
                  679***********************9987 PP

  == domain 3  score: 12.8 bits;  conditional E-value: 7.5e-05
      TPR_14    2 eallalaeallalGdpdeAiallrralalaPdda 35  
                   ++ ++a++ll++G  d+A+ ll+r l+  P+++
  EPX71929.1 1534 SVWIQYASFLLTNGSEDTARGLLQRSLQSLPKSE 1567
                  5799************************999876 PP

  == domain 4  score: 8.7 bits;  conditional E-value: 0.0015
      TPR_14    8 aeallalGdpdeAiallrralalaPddaeawllla 42  
                  a +++ +Gdp++ +++++ +l+ +P+ +++w  l 
  EPX71929.1 1576 AILEFKQGDPERGRTIFEGLLSNYPKRLDLWNVLI 1610
                  667889*************************8876 PP

  == domain 5  score: -0.3 bits;  conditional E-value: 1.2
      TPR_14    4 llalaeallalGdpdeAiallrrala 29  
                  +  l + +  +Gd++  ++l++r+la
  EPX71929.1 1606 WNVLIDMEIKQGDTAIIRRLFERVLA 1631
                  55677778899************997 PP

>> TPR_15  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.1     0.018        41     144     188 ..    1425    1469 ..    1404    1488 .. 0.82
   2 ?    7.9   0.0   0.00068       1.5     139     186 ..    1526    1573 ..    1509    1620 .. 0.80
   3 ?   -2.0   0.0      0.74   1.6e+03     111     175 ..    1604    1669 ..    1599    1674 .. 0.70

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.018
      TPR_15  144 qsaafllaraelyrqegqtdaAlrdyreAlalapdsselraallW 188 
                  +s++ ++ + +++++ ++ ++A ++ ++Al+     +e  +  +W
  EPX71929.1 1425 NSSFLWISYMAYQLNLNEVEKAREIGQRALTTINYREEEEKLNVW 1469
                  7999**************************987766655555555 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.00068
      TPR_15  139 eeaaeqsaafllaraelyrqegqtdaAlrdyreAlalapdsselraal 186 
                  +++++q + +++ +a++ + +g +d A  ++++ l+  p+s+ ++   
  EPX71929.1 1526 LKNFKQVPSVWIQYASFLLTNGSEDTARGLLQRSLQSLPKSEHVKMIE 1573
                  67899***********************************99998655 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 0.74
      TPR_15  111 rlLssalellerakdydriaellksleeeea.aeqsaafllaraelyrqegqtdaAlrdyreAlal 175 
                  +l+   +++  +++d   i++l++++ + +   ++  +++     ++++ g+++    + ++Al++
  EPX71929.1 1604 DLWNVLIDMEIKQGDTAIIRRLFERVLASKLsTKKAKFIFKKWLTYEKEIGDNKGVESVKQKALEY 1669
                  667777888888899999999999988655515555555566666777778887777777888876 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0         8   1.8e+04      15      32 ..     166     183 ..     162     183 .. 0.77
   2 ?   -1.8   0.0       2.9   6.6e+03       8      22 ..    1434    1449 ..    1427    1455 .. 0.77
   3 ?   -1.2   0.0       1.8   4.1e+03      14      33 .]    1547    1566 ..    1539    1566 .. 0.81
   4 ?   10.6   0.0   0.00033      0.75       7      32 ..    1576    1601 ..    1574    1601 .. 0.92
   5 ?   -0.8   0.0       1.4   3.2e+03      12      28 ..    1615    1631 ..    1612    1632 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 8
                 HHH.HHHHHHHHHHHH-TT CS
       TPR_6  15 dtd.kAlealerlikeYPd 32 
                 d+d +A+e l+++ +++Pd
  EPX71929.1 166 DADnEAVEHLDEF-NNFPD 183
                 5555999999999.88887 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 2.9
                  HHHHH.HHHHHHHHHH CS
       TPR_6    8 lsyrk.lgdtdkAlea 22  
                  ++y+  l++ +kA+e+
  EPX71929.1 1434 MAYQLnLNEVEKAREI 1449
                  78887789*****997 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 1.8
                  HHHHHHHHHHHHHHHH-TT- CS
       TPR_6   14 gdtdkAlealerlikeYPdS 33  
                  g  d+A+ +l+r +++ P+S
  EPX71929.1 1547 GSEDTARGLLQRSLQSLPKS 1566
                  56799*******99998887 PP

  == domain 4  score: 10.6 bits;  conditional E-value: 0.00033
                  HHHHHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6    7 alsyrklgdtdkAlealerlikeYPd 32  
                  a + +k+gd+++ ++++e l+++YP+
  EPX71929.1 1576 AILEFKQGDPERGRTIFEGLLSNYPK 1601
                  5678999******************6 PP

  == domain 5  score: -0.8 bits;  conditional E-value: 1.4
                  HHHHHHHHHHHHHHHHH CS
       TPR_6   12 klgdtdkAlealerlik 28  
                  k+gdt+  ++++er++ 
  EPX71929.1 1615 KQGDTAIIRRLFERVLA 1631
                  789***********985 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1       6.1   1.4e+04      47      62 ..     157     173 ..     156     175 .. 0.75
   2 ?    2.4   0.0      0.11   2.6e+02       7      67 ..    1509    1566 ..    1505    1567 .. 0.92
   3 ?    8.7   0.0    0.0012       2.6       4      50 ..    1576    1619 ..    1574    1620 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 6.1
      TPR_16  47 qgrlaeAa.alyraalr 62 
                 + +l++Aa ++ ++a++
  EPX71929.1 157 LENLDDAAtDADNEAVE 173
                 56788899888888876 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.11
      TPR_16    7 alragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalraapda 67  
                  ++++++ d A ++ e  lk++    + +  +  ++  +l +g  + A+ l+++ l+  p++
  EPX71929.1 1509 LIKSNKLDLANEYMEGMLKNF---KQVPSVWIQYASFLLTNGSEDTARGLLQRSLQSLPKS 1566
                  788999***************...99999***********************999998876 PP

  == domain 3  score: 8.7 bits;  conditional E-value: 0.0012
      TPR_16    4 araalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrl 50  
                  a + +++gd+++ +  +e +l ++   P + + ++ l d+  +qg+ 
  EPX71929.1 1576 AILEFKQGDPERGRTIFEGLLSNY---PKRLDLWNVLIDMEIKQGDT 1619
                  77899*******************...************99999986 PP

>> RNase_II_C_S1  RNase II-type exonuclease C-terminal S1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0     0.069   1.5e+02      28      55 ..     625     653 ..     622     656 .. 0.83
   2 ?   -1.8   0.0       1.4   3.1e+03      35      45 ..     908     918 ..     905     919 .. 0.81
   3 ?    5.5   0.1    0.0072        16      35      56 ..    1275    1296 ..    1264    1298 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.069
  RNase_II_C_S1  28 v.eggaglplGervrVrLveADvatrrvr 55 
                    + +++++ + G++v V++ +  + +r++r
     EPX71929.1 625 IrDAREHFKIGQTVSVTILSCEPSERKMR 653
                    5556678899****************988 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 1.4
  RNase_II_C_S1  35 plGervrVrLv 45 
                    + G++vrVr+ 
     EPX71929.1 908 KKGDKVRVRVL 918
                    579******85 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.0072
  RNase_II_C_S1   35 plGervrVrLveADvatrrvrF 56  
                      +G++vr  + ++++++rrv +
     EPX71929.1 1275 SVGDKVRAHVLDVNPEKRRVAL 1296
                     68******************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1676 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1180  (0.0658152); expected 358.6 (0.02)
Passed bias filter:                      663  (0.0369792); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 1.14u 0.32s 00:00:01.46 Elapsed: 00:00:00.51
# Mc/sec: 9969.35
//
Query:       EPX71930.1  [L=216]
Description: 60S ribosomal protein L10a [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.7e-45  153.0   0.3      1e-44  152.7   0.3    1.1  1  Ribosomal_L1  Ribosomal protein L1p/L10e family


Domain annotation for each model (and alignments):
>> Ribosomal_L1  Ribosomal protein L1p/L10e family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.7   0.3   5.7e-49     1e-44       6     203 ..      24     210 ..      13     211 .. 0.95

  Alignments for each domain:
  == domain 1  score: 152.7 bits;  conditional E-value: 5.7e-49
                   -SSS--EEEEEEEESSS-TTSGGG--EEEEE-STSTSSCS-EEEEE-HHHHH...HHHHTT..-SEEETCHHHHHHT-HHHHHHTCCH-SEEEEEGG CS
  Ribosomal_L1   6 kkkfdesveialnlttkkpkkadqrkpgkipLphplgkevkiclitkdpqaeyakeakeagriakviglkklkkkyksfeakrkllkefdlfladdr 102
                    ++f+e+ve+++ l++++p++ d+r++g+i+Lp+  + ++  c++ + ++ +    ak+ g   + +++++lkk  k+++  +kl+k++d f+a+d 
    EPX71930.1  24 RRHFTETVELQIGLKNYDPQR-DKRFSGTIKLPNVPRPNMALCILGDAHDLD---RAKHGG--VDAMSVDDLKKLNKNKKLVKKLAKKYDAFVASDV 114
                   446***************666.99************************9999...99*99*..********************************** PP

                   GHHHHHHHCHHHHGGGT-S-ECC..CT.BTS-HHHHHHHHCTTEEEEE-TTTSEEEEEEEETTSSHHHHHHHHHHHHHHHHHTSTTTSGSEEEEEEE CS
  Ribosomal_L1 103 impllpklLGkvfgkrkkmPipvltkgtvkedvkkevekalkstvvvrldkgtclsvkvGklsftaeelaeNieavvkalvekvpkkwkniksiylk 199
                   +++++p+lLG+ ++k++k+P+pv ++   ++d+  ++ ++++ t++++l+k  cl v+vG++++++++l++Ni+ +v++lv+ ++k+w+ni s+++k
    EPX71930.1 115 LIKQIPRLLGPGLSKAGKFPTPV-SH---NDDLYGKIVEVKS-TIKFQLKKVLCLGVAVGHVEMSQDQLISNIMLAVNFLVSLLKKGWQNIGSLVIK 206
                   ***********************.43...79***********.****************************************************** PP

                   ETTS CS
  Ribosomal_L1 200 ttms 203
                   +tm+
    EPX71930.1 207 STMG 210
                   ***9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       588  (0.032796); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 1567.32
//
Query:       EPX71931.1  [L=110]
Description: plasma membrane proteolipid Pmp31 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-15   57.6   9.9    1.4e-15   57.2   9.9    1.2  1  Pmp3      Proteolipid membrane potential modulator
     0.0062   16.8   0.0     0.0075   16.5   0.0    1.1  1  Shisa     Wnt and FGF inhibitory regulator
  ------ inclusion threshold ------
      0.095   12.2   0.7       0.11   12.0   0.7    1.1  1  DUF1189   Protein of unknown function (DUF1189)


Domain annotation for each model (and alignments):
>> Pmp3  Proteolipid membrane potential modulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.2   9.9   2.3e-19   1.4e-15       2      48 ..       9      55 ..       8      56 .. 0.97

  Alignments for each domain:
  == domain 1  score: 57.2 bits;  conditional E-value: 2.3e-19
        Pmp3  2 illillaiilPPlaValksG.csadllinilLtllgylPgviHAfyii 48
                +lli+l+i++P++ V +++G csad+lini+L+ lg lPg+iHA+yi+
  EPX71931.1  9 FLLIVLSIFVPFIVVGIRRGfCSADFLINICLCALG-LPGIIHAIYIV 55
                79**********************************.*********97 PP

>> Shisa  Wnt and FGF inhibitory regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   1.3e-06    0.0075      83     171 ..       7     100 ..       2     110 .] 0.77

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 1.3e-06
       Shisa  83 yvpvlivktifivfvivgvvvivcccgclkkkqrekr..pgrenlssalaev..gpivtettsattvvhsrysepqqssssssypgat.nqgyq 171
                 + ++liv +if+ f++vg+    c+   l   ++     pg  ++   +++    p+ + ++     vh+++s++ q  s+ s+ +++ +    
  EPX71931.1   7 TSFLLIVLSIFVPFIVVGIRRGFCSADFLINICLCALglPGIIHAIYIVLKYpsYPVYDIEHGHYSSVHAPESTAHQRISANSNVNPPaYSTFA 100
                 56789************************999998887777777777777776558766699**********8888777777777766444433 PP

>> DUF1189  Protein of unknown function (DUF1189)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.7   1.9e-05      0.11     172     223 ..       7      58 ..       1      68 [. 0.76

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1.9e-05
     DUF1189 172 ltlidalilaliglilarilkiklsYkqlfkisvyalTlPtilnaileilnf 223
                 + ++ +++  ++ +i+  i++   s   l++i++ al lP i+ ai+ +l++
  EPX71931.1   7 TSFLLIVLSIFVPFIVVGIRRGFCSADFLINICLCALGLPGIIHAIYIVLKY 58 
                 44544545555567778888888899999********************993 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       427  (0.0238162); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.36u 0.25s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 832.50
//
Query:       EPX71932.1  [L=104]
Description: hypothetical protein SOCG_05447 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       489  (0.0272742); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.26s 00:00:00.63 Elapsed: 00:00:00.43
# Mc/sec: 723.72
//
Query:       EPX71933.1  [L=982]
Description: MS ion channel protein 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-20   72.6   1.3    6.8e-20   71.5   1.3    1.5  1  MS_channel  Mechanosensitive ion channel
  ------ inclusion threshold ------
      0.012   16.1   0.1      0.031   14.7   0.1    1.7  1  EF-hand_7   EF-hand domain pair
       0.11   12.5   0.1       0.29   11.2   0.1    1.6  1  DUF4485     Domain of unknown function (DUF4485)


Domain annotation for each model (and alignments):
>> MS_channel  Mechanosensitive ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.5   1.3   1.1e-23   6.8e-20       3     180 ..     579     760 ..     577     774 .. 0.92

  Alignments for each domain:
  == domain 1  score: 71.5 bits;  conditional E-value: 1.1e-23
                 HHHHHHHHHHHHHHHHTTT--SCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTT-.SS-TT-EEESS....SEEEEEEEE-SSEEEEEETTSEEEEE CS
  MS_channel   3 ilkiliivvgilivlsllgvnvsallavlGalglalglalkdlisnlvaGiillfek.pfkiGDlveig....dieGtVediglrttkirtfdgrivti 96 
                 i  + + ++++ i+l l+  n+s +l+++G+  l+l+  + ++  +l+ +ii++f k p+++GD++ +          V++i + +t +r  +g+i+  
  EPX71933.1 579 ICMFFVALITLFIFLYLIARNFSGVLTSAGTWLLGLSWLFSSSAVELLNSIIFVFVKhPYDVGDRISVLingvVTPAMVKEIAIMSTEFRLLTGEIIQA 677
                 56688899999999999***********************************999888********987776555568********************* PP

                 EHHHHHTS-EEESSS.SSEEEEEEEEEE-TTS-...HHHHHHHHHHHHHH-TTB-TTS-EEEEEEEE-SSSEEEEEEEEEET.. CS
  MS_channel  97 PnsslvtsnieNlsresgtrrikvsigvtyssdvkklekvleelkealkekpevlkdkellvvldefgdsslnfevrvfvktvv 180
                 Pn+ l t  i+N++r s++ ++ +++++++++  +++e ++ +l ++lke++++ k   l+ v d + + s+++ v +f k + 
  EPX71933.1 678 PNNLLNTLWISNMRR-SDGISDPITVSLKFGTTLQQIEALRVKLIDFLKEEKRDYKPDLLTEVTDFPNLYSMSLLVVFFHKYNF 760
                 ***************.************************************************************99988744 PP

>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.1   5.2e-06     0.031       5      66 ..     493     548 ..     489     552 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 5.2e-06
   EF-hand_7   5 keaFkelDtdgdgyldkeellrllrkifqgagegsklsdeelellfkefDtdkdGvisfdEF 66 
                 ++ F++l + g+  + ++++  ++r+     + g++ ++e+l ++ + fD d +G i+ +E 
  EPX71933.1 493 RCLFQALVRSGNIDIVYDDFVPVYRN-----ELGEV-DEEKLNACYNIFDRDLNGDITCEEI 548
                 78899**************888***7.....77766.*********************9996 PP

>> DUF4485  Domain of unknown function (DUF4485)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   4.9e-05      0.29      44      75 ..     765     796 ..     758     800 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 4.9e-05
     DUF4485  44 eekknRNdYlqlLlkmlqngrlegPFnkpPpd 75 
                   ++ RN+++ +L+++lq+  + +P n++P +
  EPX71933.1 765 LRMRRRNMFMCALMTYLQELDIVSPINNSPGK 796
                 56899**********************99965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (982 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1907  (0.106364); expected 358.6 (0.02)
Passed bias filter:                      645  (0.0359752); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.83u 0.31s 00:00:01.13 Elapsed: 00:00:00.47
# Mc/sec: 6290.24
//
Query:       EPX71934.1  [L=207]
Description: gstA [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.4e-15   55.3   0.0    1.1e-14   54.6   0.0    1.3  1  GST_N_3       Glutathione S-transferase, N-terminal domain
    4.8e-11   42.8   0.1    7.7e-11   42.2   0.1    1.3  1  GST_N         Glutathione S-transferase, N-terminal domain
    5.4e-11   42.6   0.0    8.6e-11   41.9   0.0    1.4  1  GST_C         Glutathione S-transferase, C-terminal domain
    6.8e-10   39.1   0.1    1.5e-09   38.0   0.1    1.6  1  GST_N_2       Glutathione S-transferase, N-terminal domain
    2.1e-08   34.2   0.0    3.7e-08   33.5   0.0    1.3  1  GST_C_3       Glutathione S-transferase, C-terminal domain
    0.00014   21.8   0.0    0.00061   19.8   0.0    2.1  1  GST_C_2       Glutathione S-transferase, C-terminal domain
    0.00074   19.3   0.0     0.0015   18.2   0.0    1.6  1  GST_C_6       Glutathione S-transferase, C-terminal domain
     0.0062   16.7   0.0       0.01   16.0   0.0    1.4  1  Glutaredoxin  Glutaredoxin
  ------ inclusion threshold ------
      0.064   14.0   0.0       0.17   12.7   0.0    1.7  1  GST_N_4       Glutathione S-transferase N-terminal domain
      0.084   12.5   0.0       0.12   12.0   0.0    1.2  1  LOR           LURP-one-related
       0.13   12.6   0.0       0.42   10.9   0.0    1.9  2  Tom37         Outer mitochondrial membrane transport complex 


Domain annotation for each model (and alignments):
>> GST_N_3  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.6   0.0   6.6e-18   1.1e-14       1      73 [.       7      80 ..       7      82 .. 0.95

  Alignments for each domain:
  == domain 1  score: 54.6 bits;  conditional E-value: 6.6e-18
                EES-TTSHHHHHHHHHHHHHT--EEEE---TTT.THHHHHHH-TT--SSEEETTS-EEESHHHHHHHHHHHH-G CS
     GST_N_3  1 LygfpaSpyarrvrlaLnekglpvevvevtpge.hdeellaknplgkvPvLeddgealtdSlaIidyLeelypg 73
                Lygf+ S ++ rvrl+L  +++p+++v + + e ++ee+++ np ++vP+L d+++++ dS aI+ yL ++y++
  EPX71934.1  7 LYGFEKSGHVHRVRLLLSFLKIPYNWVIIQESEvNSEEIKRLNPWKQVPILADGDTVVSDSNAIMVYLVKKYGD 80
                9****************************766647************************************997 PP

>> GST_N  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.2   0.1   4.7e-14   7.7e-11       2      75 ..       4      75 ..       3      76 .. 0.95

  Alignments for each domain:
  == domain 1  score: 42.2 bits;  conditional E-value: 4.7e-14
                EEEEESSSTSHTHHHHHHHHHHTT-EEEEEEECSTTTCGGCHHHHHHCTTS-SSEEEETTEEEESHHHHHHHHH CS
       GST_N  2 vltlysirgsprahrirlllaakgveyevvpldfeageekspellklnplgkvPaLedngkkltESraIleYia 75
                +++ly++ +s  +hr+rlll  ++++y+ v ++  ++e +s+e ++lnp ++vP L d++ ++  S+aI+ Y++
  EPX71934.1  4 KIKLYGFEKSGHVHRVRLLLSFLKIPYNWVIIQ--ESEVNSEEIKRLNPWKQVPILADGDTVVSDSNAIMVYLV 75
                689*****************************9..678899*******************************96 PP

>> GST_C  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.9   0.0   5.3e-14   8.6e-11      21      93 .]     122     192 ..      94     192 .. 0.84

  Alignments for each domain:
  == domain 1  score: 41.9 bits;  conditional E-value: 5.3e-14
                 HHHHHHHHHHHHHHHHHHHHHHHTSSSSSTTSSCHHHHHHHHHHHHHHHHTTTTTTTTSHHHHHHHHHHHTSH CS
       GST_C  21 eelvdealekvaevlsaleeelkkqdylvGdkltlADialvpilnwlqrlglafgqekfpnlkawlerimarp 93 
                   ++++a++  a  +++ +++l+++ ylvG ++tlAD+a++  + ++++  +++  + +pn+ awl+ri ++p
  EPX71934.1 122 SDDLEAAKKIAAILFEFMNGYLEGKEYLVGKHITLADFAMYSYTAHAPEGSISL--QPYPNIVAWLKRIENLP 192
                 3355666666666799*****************************999998888..6************9988 PP

>> GST_N_2  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.0   0.1   9.1e-13   1.5e-09       5      67 ..      16      74 ..      13      77 .. 0.88

  Alignments for each domain:
  == domain 1  score: 38.0 bits;  conditional E-value: 9.1e-13
                HHHHHHHHHHCT--EEEEEEH...-TTSHHHHHHHHCTTTSSSEEE-CTTEEEESHHHHHHHH CS
     GST_N_2  5 ahRvlialalkglediisvvvlepkgfekseefprlnprgtVPvLwdkdgqvineSseIlryl 67
                +hRv+++l  +++++ +  +   ++++ +see +rlnp  +VP+L d + +v+ +S +I+ yl
  EPX71934.1 16 VHRVRLLLSFLKIPYNWVII---QESEVNSEEIKRLNPWKQVPILAD-GDTVVSDSNAIMVYL 74
                7***************6555...45566689***************9.779**********99 PP

>> GST_C_3  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.5   0.0   2.3e-11   3.7e-08      29      90 ..     132     192 ..     112     194 .. 0.85

  Alignments for each domain:
  == domain 1  score: 33.5 bits;  conditional E-value: 2.3e-11
                 HHCHHHHHHHHHHCHGTSSSSTTS--HHHHHHHHHHHHHHHH.TCC.CC-HHHHHHHHHHHTSH CS
     GST_C_3  29 lpkflkyfekvlkkkgggylvgdklTyADlalfqvldgleea.eal.kkfpklkalyervearp 90 
                 +   +++++ +l+  g++ylvg+++T+AD+a++++  +  e      +++p++ a+ +r+e++p
  EPX71934.1 132 AAILFEFMNGYLE--GKEYLVGKHITLADFAMYSYTAHAPEGsI-SlQPYPNIVAWLKRIENLP 192
                 4556778888888..999****************9999999954.45***************99 PP

>> GST_C_2  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   3.7e-07   0.00061       6      69 .]     127     187 ..      94     187 .. 0.86

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 3.7e-07
                 HHHHHCCHCHHHCTTT---SS.CTTCS--HHHHHHHHHHHHHHHHHHS----TT-HHHHHHHHH CS
     GST_C_2   6 raleqldaaldaleahLadspflfGdqptlaDialapflvrlraagpgfdireaypnlraWler 69 
                 +a++++   +++++ +L+++ +l G ++tlaD+a +    ++  a++g    + ypn++aWl+r
  EPX71934.1 127 AAKKIAAILFEFMNGYLEGKEYLVGKHITLADFAMYS---YTAHAPEGSISLQPYPNIVAWLKR 187
                 4666666678999******99***********98665...6666777777889*********98 PP

>> GST_C_6  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   9.5e-07    0.0015       7      64 .]     138     188 ..     132     195 .. 0.81

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 9.5e-07
     GST_C_6   7 aLselLgdkkyFfGdkPtslDAlvFGhlaqilytplespelrellkeypNLvayceri 64 
                  +  +L+ k+y+ G+++t +D ++++++a      +e +     l+ ypN+va+ +ri
  EPX71934.1 138 FMNGYLEGKEYLVGKHITLADFAMYSYTAHA----PEGS---ISLQPYPNIVAWLKRI 188
                 56678999******99**************9....3444...6777888888888776 PP

>> Glutaredoxin  Glutaredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   6.3e-06      0.01      12      54 ..      16      58 ..       5      64 .. 0.86

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 6.3e-06
                  HHHHHHHHHHTTGGEEEEEGCCSHHHHHHHHHHHTSSSSSEEE CS
  Glutaredoxin 12 CkkakrlLkelgvkfeeidvdkdeeireelkelsgvrtvPqvf 54
                   ++++ lL  l++++  + + + e   ee+k+l+++++vP + 
    EPX71934.1 16 VHRVRLLLSFLKIPYNWVIIQESEVNSEEIKRLNPWKQVPILA 58
                  589999**********************************876 PP

>> GST_N_4  Glutathione S-transferase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0    0.0001      0.17       6      63 ..      19      82 ..      15     103 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 0.0001
     GST_N_4  6 letyLrmagipyele.....pssne.m.haspkgklPfielngelliadsefiieflkekgvdld 63
                +  +L + +ipy+ +     ++++e + +  p +++P +  +++ +++ds+ i+ +l++k  d d
  EPX71934.1 19 VRLLLSFLKIPYNWViiqesEVNSEeIkRLNPWKQVPILADGDT-VVSDSNAIMVYLVKKYGDED 82
                56667777777654411111222322224467889999999777.**************997766 PP

>> LOR  LURP-one-related
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   7.2e-05      0.12       6      60 ..      38      89 ..      33      95 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 7.2e-05
                GGGB-SS-EEEEEE----------EEEEETTS-EEEEEE-.SCTTBTTEEEEE-T CS
         LOR  6 seylsteeesltvwrkslvfnkdgftvyDskGnlvFrVdnakafslsdelvLmDs 60
                se  s+e ++l  w+++ ++++++ +v Ds+  +v+ V+++   +++d + L+D+
  EPX71934.1 38 SEVNSEEIKRLNPWKQVPILADGDTVVSDSNAIMVYLVKKY---GDEDFWFLKDP 89
                6666777788999***************************4...79999999997 PP

>> Tom37  Outer mitochondrial membrane transport complex protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00026      0.42      15      59 ..      37      80 ..      19     105 .. 0.76
   2 ?   -1.8   0.0       2.2   3.6e+03      45      56 ..     177     188 ..     169     205 .. 0.66

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00026
       Tom37 15 pfevvessnpslsptgeLPaLkdgegtwisgfdnIveylrkksee 59
                + ev+    + l p +++P+L dg+ t +s+ + I+ yl kk+++
  EPX71934.1 37 ESEVNSEEIKRLNPWKQVPILADGD-TVVSDSNAIMVYLVKKYGD 80
                4455555556668999*******99.899***********99633 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 2.2
       Tom37  45 gfdnIveylrkk 56 
                  + nIv++l++ 
  EPX71934.1 177 PYPNIVAWLKRI 188
                 567777777754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       463  (0.0258241); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1445.17
//
Query:       EPX71935.1  [L=294]
Description: membrane transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.5e-28   97.6  25.9      1e-27   97.2  25.9    1.1  1  Bac_rhodopsin  Bacteriorhodopsin-like protein


Domain annotation for each model (and alignments):
>> Bac_rhodopsin  Bacteriorhodopsin-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.2  25.9   5.8e-32     1e-27       1     219 [.      31     249 ..      29     252 .. 0.91

  Alignments for each domain:
  == domain 1  score: 97.2 bits;  conditional E-value: 5.8e-32
                    HHHHHHHHHHHHHHHHHHHHHTTTSSTCCHHHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEETTEE.....EEEETHHHHHHHHHHHHHHHHHHHH CS
  Bac_rhodopsin   1 wtvfsvfallalvatllfvvtsrrvkdgekrkllvipllitaiaavaYltmalglGltgveaefeh.....rqvfyarYidWllttPllvlvlael 91 
                    w++   f+++ + a+++ +v     +++ kr ++ +  ++ +++a+ Y++ma  lG+t v+          r v+ +rYi+W++  Pl++  ++  
     EPX71935.1  31 WAI---FSIFLFCAIVYPIVSIF--SSPPKRMFYYVYSVTCMVSAIVYFSMAGELGYTLVNLSTSTwfrgiRVVYFVRYIQWMINFPLVISSIFHF 121
                    455...55555555555555334..58999********************************8888****************************** PP

                    TTSSHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTSTHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTTS CS
  Bac_rhodopsin  92 agadrrtllvlvladvvmivgglvgaliestyrwvyftisvaallvvlylllgelaraakslsserrslfntLrnlvvvlwilYpvawllgeeGng 187
                    ag+++ ++l+ v+  ++    +l++a++ st rw++f++s +++  +l+   ++ + +++ l+++++  f+  ++ + vlw+ Y+v+w+l e+ +g
     EPX71935.1 122 AGVSFMRILLTVFNIWLCFSCLLAAAMTVSTHRWGFFAFSLVGYACALVHTCVTYKFNIQPLKRKAKIGFLCSIIYFFVLWASYFVCWGLCEG-IG 216
                    *****************************************************************9888999999999************986.99 PP

                    S.CHHHHHHHHHHHHHHHHHHHHHHHHCCHTTC CS
  Bac_rhodopsin 188 i.qpdveavvygilDlvtkvgfglillaaatsl 219
                       p  eav+y++lD++ + +fg++  ++++++
     EPX71935.1 217 FpLPIGEAVFYSVLDFLEFPIFGVLFSWMIDVV 249
                    9777889******************99998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (294 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       881  (0.0491383); expected 358.6 (0.02)
Passed bias filter:                      279  (0.0155614); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2119.62
//
Query:       EPX71936.1  [L=246]
Description: RNA binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-11   44.0   2.3    1.8e-11   43.5   0.9    1.9  2  SAP            SAP domain
    0.00035   20.3   7.4     0.0014   18.4   0.2    3.3  2  Tho1_MOS11_C   Tho1/MOS11 C-terminal domain
     0.0024   17.5   0.1     0.0048   16.6   0.1    1.5  1  HeH            HeH/LEM domain
  ------ inclusion threshold ------
        8.2    4.9   9.8        8.8    4.8   9.8    1.2  1  DUF2151        Cell cycle and development regulator


Domain annotation for each model (and alignments):
>> SAP  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.5   0.9     4e-15   1.8e-11       1      32 [.       4      35 ..       4      38 .. 0.95
   2 ?   -1.4   0.0      0.46   2.1e+03       9      19 ..     150     160 ..     148     160 .. 0.62

  Alignments for each domain:
  == domain 1  score: 43.5 bits;  conditional E-value: 4e-15
                HTT--HHHHHHHHHHTT--TTS-HHHHHHHHH CS
         SAP  1 lskltVaeLKeeLkkrGLptsGkKaeLieRLk 32
                l++l+Va+L+e+L++ GL+t+G+K+eL++RL+
  EPX71936.1  4 LKNLKVADLREKLAEKGLSTNGNKNELVARLT 35
                689****************************8 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.46
                 HHHHHHHTT-- CS
         SAP   9 LKeeLkkrGLp 19 
                 L e  k++GLp
  EPX71936.1 150 LIERAKRFGLP 160
                 55666777776 PP

>> Tho1_MOS11_C  Tho1/MOS11 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.2   3.1e-07    0.0014      13      47 ..     148     180 ..     141     190 .. 0.82
   2 ?    3.0   2.4      0.02        88      13      24 ..     231     242 ..     200     246 .] 0.76

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 3.1e-07
  Tho1_MOS11_C  13 ekklkRakKFgqeeeaidelekqleRieKFGvdln 47 
                   +k ++Rak+Fg + ++ d+++k  +R+ +FGv+ +
    EPX71936.1 148 NKLIERAKRFGLPMDD-DNIKK-AARAARFGVQTT 180
                   7889**********99.88876.59*******864 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.02
  Tho1_MOS11_C  13 ekklkRakKFgq 24 
                   ek  kRa++Fg+
    EPX71936.1 231 EKARKRAERFGN 242
                   333455555555 PP

>> HeH  HeH/LEM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.1   1.1e-06    0.0048       1      21 [.       4      24 ..       4      35 .. 0.82

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.1e-06
         HeH  1 pksLtVaqLRriLvehgveyP 21
                +k+L+Va+LR+ L+e+g + +
  EPX71936.1  4 LKNLKVADLREKLAEKGLSTN 24
                699*************98754 PP

>> DUF2151  Cell cycle and development regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   9.8     0.002       8.8     569     670 ..      84     241 ..      17     246 .] 0.67

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.002
     DUF2151 569 kvkrkfsdke..dktekksakee.seksd.eesseskkeeeaeresvkeaevdspesppakll.................................... 627
                 k+++++++k+  dk++++ a+++ +eks  +e+++++k +++++es++e++ dsp+     +l                                    
  EPX71936.1  84 KPSEEEAPKTegDKANEEPAEDQqKEKSAaRETESNEKPDTNTEESTTENTKDSPN---PDILaaeqnklierakrfglpmdddnikkaaraarfgvqt 179
                 22222222220022222222221022222233333333344444444444444444...3334567888888999999999999888888888888888 PP

     DUF2151 628 .plkka..................kseeeklaekskgkeslldlwankiekkeskkrreFvG 670
                  p+ k+                  ++ ++++++++ g++ + +++   +e ++++kr e  G
  EPX71936.1 180 tPVAKQvngelprsrkgrldkrgrQKFRQQQQDQTAGQKRKSSILEDPVEAEKARKRAERFG 241
                 84433355555555567777777677788888888899999999999999999999998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1678  (0.0935914); expected 358.6 (0.02)
Passed bias filter:                      521  (0.0290591); expected 358.6 (0.02)
Passed Vit filter:                        83  (0.00462937); expected 17.9 (0.001)
Passed Fwd filter:                        26  (0.00145016); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.70u 0.30s 00:00:01.00 Elapsed: 00:00:00.45
# Mc/sec: 1627.93
//
Query:       EPX71937.1  [L=165]
Description: 60S ribosomal protein/L12A [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.5e-23   80.4   0.7    1.1e-22   79.6   0.7    1.3  1  Ribosomal_L11_N  Ribosomal protein L11, N-terminal domain
    4.1e-17   62.4   1.0    7.7e-17   61.6   0.2    1.8  2  Ribosomal_L11    Ribosomal protein L11, RNA binding domain


Domain annotation for each model (and alignments):
>> Ribosomal_L11_N  Ribosomal protein L11, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.6   0.7   1.2e-26   1.1e-22       3      65 .]       5      69 ..       3      69 .. 0.94

  Alignments for each domain:
  == domain 1  score: 79.6 bits;  conditional E-value: 1.2e-26
  Ribosomal_L11_N  3 k...vvkvvklrvpaGkAtpaPplGpaLGplGlnikkfckefnkaTkdkkglripVkitvyqdrsf 65
                     +   +vk+v +r  +G+++ ++ l+p++GplGl++kk++++++kaTkd+kglr++Vk+t+ q+r++
       EPX71937.1  5 FdpnEVKTVIMRAVGGEVAGGSTLAPKIGPLGLSPKKVGEDIAKATKDWKGLRVTVKLTI-QNRQA 69
                     555589******************************************************.***96 PP

>> Ribosomal_L11  Ribosomal protein L11, RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.28   2.5e+03       9      43 ..      14      51 ..       9      65 .. 0.50
   2 !   61.6   0.2   8.6e-21   7.7e-17       2      70 .]      74     143 ..      73     143 .. 0.94

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.28
                   HHHHHTXSSXXSSTTTSXXEE..EEHHHHHH.HHHHHG CS
  Ribosomal_L11  9 LkkaagiekgsgkpgketvGt..vslkqvye.IAkiKk 43
                   +++a+g e   g++   ++G   +s k+v e IAk+ k
     EPX71937.1 14 IMRAVGGEVAGGSTLAPKIGPlgLSPKKVGEdIAKATK 51
                   56666655444444333444322344444322666655 PP

  == domain 2  score: 61.6 bits;  conditional E-value: 8.6e-21
                    --SHHHHHHHHHTXSSXXSSTTTSXX..EEEEHHHHHHHHHHHGGGHT.XS.SHHHHHHHHHHHHCTTTEEE CS
  Ribosomal_L11   2 tPptsylLkkaagiekgsgkpgketv..GtvslkqvyeIAkiKksdln.aalsleaavksilgtArsmGikV 70 
                    +P++s+l++ka++++ +++k+ k++v  G+vs+++++e+A++++  ++ a+ +l+++vk+ilgtA s+G++V
     EPX71937.1  74 VPSASALVIKALKEPARDRKKDKGVVhsGNVSIDEIVEVARTMR-FKSlAK-DLSGTVKEILGTAFSVGCTV 143
                    7***********************99******************.555266.******************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       584  (0.0325729); expected 358.6 (0.02)
Passed bias filter:                      493  (0.0274974); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 1241.17
//
Query:       EPX71938.1  [L=322]
Description: serine/threonine protein phosphatase Sds21 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.8e-40  138.6   0.1    4.9e-40  138.2   0.1    1.1  1  Metallophos  Calcineurin-like phosphoesterase
    1.4e-20   73.4   0.7    2.8e-20   72.5   0.7    1.5  1  STPPase_N    Serine-threonine protein phosphatase N-terminal 


Domain annotation for each model (and alignments):
>> Metallophos  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.2   0.1   5.5e-44   4.9e-40       4     201 ..      56     245 ..      53     248 .. 0.94

  Alignments for each domain:
  == domain 1  score: 138.2 bits;  conditional E-value: 5.5e-44
                  EEEESBTBTTCCTHHHHHHHHHHHH..HHHTTESEEEEESTSSSSSHHHHHHHHH.HHHHHHHTSEEEEEC-TTS........CHHHHHHHHHHHHHH CS
  Metallophos   4 lvigDlHlalgggqlddllkllddl..lreekpdlvllaGDlvdrgdlekellel.laalvkypipvylllGNHe........gfeeellnkygylgi 90 
                   ++gD+H     gq++dll+l++    +++  ++l+l  GD+vdrg  + e++ l +a+++kyp +++ll+GNHe        gf++e++++y     
   EPX71938.1  56 KICGDIH-----GQYSDLLRLFEYGgfPPD-ANYLFL--GDYVDRGKQSLEVICLlFAFKIKYPENFFLLRGNHEcasinriyGFYDECKRRYN---- 141
                  58*****.....**********88843444.779999..*******9999999999************************************99.... PP

                  HHHHHEHHHCEEETSEEEEEETTEEEEEEEESE.CEEETHHHHHHHHHHHSCHHHHCC...HHHHHHHHHHTTCSEEEEEESSESSCSSSCSCCHHHH CS
  Metallophos  91 fsepwrsdaevfnnlplaslgsgslkvlllhGg.spellvsldklgslnleleapepg...dewlkdlekrekadwvivlgHsplyrgsgylfgdeal 184
                    ++w+ ++++fn++p+a++++   k++++hGg sp+l ++ +++ ++++++++p+ g   d++++d       + + v g+  + rg +y+fg +++
   EPX71938.1 142 -IKIWKVFTDCFNCMPVAAIVDE--KIFCMHGGlSPDL-NTMEQIQRIVRPTDIPDTGllcDLLWSD-------PEKDVKGWGDNDRGVSYTFGADVV 228
                  .99********************..********77777.****************************.......************************ PP

                  HHHHHHTTESEEEEESS CS
  Metallophos 185 edllkkygvdlvisGHt 201
                   ++l+k + dlv+++H+
   EPX71938.1 229 NRFLQKQDMDLVCRAHQ 245
                  ****************8 PP

>> STPPase_N  Serine-threonine protein phosphatase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.5   0.7   3.1e-24   2.8e-20       1      48 []       5      52 ..       5      52 .. 0.95

  Alignments for each domain:
  == domain 1  score: 72.5 bits;  conditional E-value: 3.1e-24
   STPPase_N  1 vDdiIerLlevrg.kpggkkvqLseaEIrqlCakareiFLsQPtLLeLe 48
                +D+iIe+L++v++ kpg ++ qLseaEIr+lC++ar++FL+QP+LLeLe
  EPX71938.1  5 IDNIIEKLIKVQHvKPG-RQTQLSEAEIRYLCKTARSLFLDQPMLLELE 52
                8************6655.******************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       419  (0.02337); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.22s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 2498.01
//
Query:       EPX71939.1  [L=459]
Description: hypothetical protein SOCG_03873 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (459 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       783  (0.0436723); expected 358.6 (0.02)
Passed bias filter:                      267  (0.0148921); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3405.57
//
Query:       EPX71940.1  [L=760]
Description: GTPase activating protein Sec23a [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-80  270.5   0.0      2e-80  269.9   0.0    1.3  1  Sec23_trunk     Sec23/Sec24 trunk domain
    4.9e-31  107.3   0.1    9.5e-31  106.4   0.1    1.5  1  Sec23_BS        Sec23/Sec24 beta-sandwich domain
    1.4e-22   79.4   0.1    3.7e-22   78.1   0.1    1.8  1  Sec23_helical   Sec23/Sec24 helical domain
    3.1e-14   52.7   5.8    6.9e-14   51.6   5.8    1.6  1  zf-Sec23_Sec24  Sec23/Sec24 zinc finger
    8.1e-12   44.9   0.0    3.3e-11   42.9   0.0    2.0  2  Gelsolin        Gelsolin repeat
  ------ inclusion threshold ------
      0.016   15.8   0.0        2.4    8.8   0.0    2.7  3  VWA_2           von Willebrand factor type A domain


Domain annotation for each model (and alignments):
>> Sec23_trunk  Sec23/Sec24 trunk domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  269.9   0.0   6.5e-84     2e-80       2     243 .]     121     387 ..     120     387 .. 0.98

  Alignments for each domain:
  == domain 1  score: 269.9 bits;  conditional E-value: 6.5e-84
                  S--EEEEEEE-SHHHHHHTHHHHHHHHHHHHCTTSSTSTT-EEEEEEESSSEEEEETSTTS.......SSSEEEEECHTTSCC............... CS
  Sec23_trunk   2 kppvflFviDvsleaikegelkalkeslkqsLdllPeepralvglitfdsvvhffelksel.......rqpkelvvsdlqdvf............... 77 
                   ppvflFv+D++++   +++l+alk+sl+ sL+llP  p++lvglitf+++v+++el+++        r++k+++ +++q+++               
   EPX71940.1 121 LPPVFLFVVDLCQD---QENLQALKDSLIISLSLLP--PECLVGLITFGTMVDVYELGYTDcsksyvfRGSKDYSSKQVQEMLglpvssaaapialqq 213
                  69************...*******************..*********************99************************************* PP

                  ......SSTSSSSSEETTTTHHHHHHHHHHHHH.HSTT-TTC-----HHHHHHHHHHHHCHCT..S-EEEEEEESS---SSTTTSS-SBTTS...CCT CS
  Sec23_trunk  78 ......lpladrlLvplseseavledlLeelpe.mfavtagkrperalgpalkaavellkave..tggkiivfvgslptvgaggklksrede...sll 163
                          +a+r+L+p++++e++l+++Le+l++  ++v++++rp+r++g+al++av+++++++  +gg+i+vf+g+++tvg+g++++++++e   s++
   EPX71940.1 214 arsvsgGMTASRFLLPIQQCEFQLTSILEQLQPdSWPVANDRRPQRCTGTALNIAVSMMESSCnnSGGRIMVFAGGPSTVGPGMVVSTELREpirSHH 311
                  ***9977778**************************************************88789*************************999***** PP

                  SSTTCHHCHSCSSSCHHHHHHHHHHHCTEEEEEEEECSS--SHHHHTHHHHTTT-EEEEETTTCCHHHHHHHHHHHHHHH CS
  Sec23_trunk 164 didkekaklvkkadkfYkkLakecvkqgisvDlFlfsldyvdlaelkqlaeltgGqvvlydsFsaekdasklkqdlkrvv 243
                  d+++++ak++kka +fY++L+k+++++g++vD+ +++ld+++++e+ +l+ +tgG++vl+dsF+    +s++kq+++r++
   EPX71940.1 312 DVERDQAKHMKKALRFYESLSKRVSANGHAVDILAGCLDQIGMMEMRSLSASTGGYLVLSDSFT----TSIFKQSFQRIF 387
                  ****************************************************************....**********86 PP

>> Sec23_BS  Sec23/Sec24 beta-sandwich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.4   0.1   3.2e-34   9.5e-31       1      95 [.     398     500 ..     398     501 .. 0.94

  Alignments for each domain:
  == domain 1  score: 106.4 bits;  conditional E-value: 3.2e-34
                 EEEEEEEEEE-TTEEEEEEESSSEEC....STBESSEESECSESEEEEEEEETT--EEEEEEE....SSBTCTTSEEEEEEEEEEEETTSEEEEEEEEE CS
    Sec23_BS   1 gfnatlevrtSkelkvsgliGncvsl....snvsekeiGeggtsewklcsldpdstlavyfdi....deklksgkqayiQfatlYthssgerrlRVttv 91 
                 gfna++ev tSkelk+sgliGn+vsl    +nv ++eiG g+t++wk+c+l+p+s++a+yf++     +  +s+++ +iQf+tlY+hss++ rlRVtt 
  EPX71940.1 398 GFNASMEVVTSKELKISGLIGNAVSLnkkaQNVGDTEIGLGNTNSWKMCALSPKSAFALYFEVatqtAAAPQSNDKGLIQFLTLYQHSSNTFRLRVTTA 496
                 79************************888879*******************************88774457889************************9 PP

                 EEEE CS
    Sec23_BS  92 alpv 95 
                 a+++
  EPX71940.1 497 ARAF 500
                 9876 PP

>> Sec23_helical  Sec23/Sec24 helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.1   0.1   1.2e-25   3.7e-22       1     102 [.     513     611 ..     513     612 .. 0.97

  Alignments for each domain:
  == domain 1  score: 78.1 bits;  conditional E-value: 1.2e-25
                    -HHHHHHHHHHHHHHHTTTS-HHHHHHHHHHHHHHHHHHHHHH-------------GGGTTHHHHHHHHHTSTTTS-.-TT--HHHHHHHHHHHHH CS
  Sec23_helical   1 DqeavtvllakqaidkalesgladarealdtslvdllsayrkvgasgsspsqlqlpeslklLPlyilallKspafrg.gnsvpaDervfalsllls 95 
                    Dqe+++v +a+ a  ka+  +  d+ ++ d+ l++l++++ ++ ++  +p++++l++++ l+P+++++l++sp f++ +n++p De++f++++l+ 
     EPX71940.1 513 DQETAAVAMARIAAFKAEVDDGPDVLRWTDRMLIKLCQKFAEYRKD--DPASFRLSSQFTLYPQFMYYLRRSP-FLQiFNNSP-DETAFYRHMLNI 604
                    9*****************99************************99..*************************.8888*****.************ PP

                    --HHHHH CS
  Sec23_helical  96 lpvdqll 102
                    ++v++ l
     EPX71940.1 605 EDVNNAL 611
                    ***9976 PP

>> zf-Sec23_Sec24  Sec23/Sec24 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.6   5.8   2.3e-17   6.9e-14       1      39 []      53      92 ..      53      92 .. 0.99

  Alignments for each domain:
  == domain 1  score: 51.6 bits;  conditional E-value: 2.3e-17
  zf-Sec23_Sec24  1 PirCrr.CraylNpfckidfggkrwiCnfCnhknevppeY 39
                    P+ C+  C+a+lNpfc+ d ++k wiC+fC ++n +pp+Y
      EPX71940.1 53 PVTCKApCKAILNPFCHLDTRAKFWICPFCLQRNMLPPQY 92
                    99*************************************9 PP

>> Gelsolin  Gelsolin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0      0.99   2.9e+03      28      45 ..     179     199 ..     168     236 .. 0.73
   2 !   42.9   0.0   1.1e-14   3.3e-11       5      76 .]     628     714 ..     624     714 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.99
                 EEEEEEHTT...SHHHHHHHH CS
    Gelsolin  28 tiflWiGke...ssqeeknfa 45 
                 + ++++G++   s q +++++
  EPX71940.1 179 KSYVFRGSKdysSKQVQEMLG 199
                 679999999887777777666 PP

  == domain 2  score: 42.9 bits;  conditional E-value: 1.1e-14
                 EEEBSSSGGGEETTSEEEEEESS........EEEEEEHTT..SHHHHHHHHHHHHHHHH.....HCTTTTTSEEEEEETTHHHHHHH CS
    Gelsolin   5 pkvvklsssslesgdcyLLdngf........tiflWiGke..ssqeeknfaadlaaeld.....seerfplpeliredqgkeparFl 76 
                  k+v+l+  s++s+ ++LLd++f        ti++W++++    +e++n++ +l+a+         +rfp p++i++dqg+++ rFl
  EPX71940.1 628 GKPVLLDAVSVKSDAILLLDTFFhilifhgdTIAQWRNAGyhEKPEYANLKELLQAPRVeaaelLVDRFPIPRFIVCDQGGSQGRFL 714
                 69*******************************************************999****9999***************9997 PP

>> VWA_2  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.027        82      17      51 ..     134     169 ..     126     217 .. 0.84
   2 ?    8.8   0.0   0.00081       2.4      54     106 ..     229     289 ..     216     290 .. 0.86
   3 ?   -3.9   0.0         6   1.8e+04      73      91 ..     316     334 ..     308     342 .. 0.65

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.027
       VWA_2  17 gptrleaakdaveallkslp.gdrvglvtfsdgpev 51 
                  + +l+a+kd ++  l+ lp +  vgl+tf++ + v
  EPX71940.1 134 DQENLQALKDSLIISLSLLPpECLVGLITFGTMVDV 169
                 467899****9999999997699********97743 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00081
       VWA_2  54 pltkdkakilnalrnleak........gggtnlaaaLqlarkalkkrrkgekrvivlitDg 106
                 p  +   ++ ++l++l+++        + + ++++aL+ a +++++ +++   +i+++++g
  EPX71940.1 229 PIQQCEFQLTSILEQLQPDswpvandrRPQRCTGTALNIAVSMMESSCNNSGGRIMVFAGG 289
                 555666678899999999999999888899***************999**********988 PP

  == domain 3  score: -3.9 bits;  conditional E-value: 6
       VWA_2  73 gggtnlaaaLqlarkalkk 91 
                 +++ ++ +aL++ +++ k+
  EPX71940.1 316 DQAKHMKKALRFYESLSKR 334
                 4677777788777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (760 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       425  (0.0237046); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.62u 0.27s 00:00:00.89 Elapsed: 00:00:00.57
# Mc/sec: 4025.99
//
Query:       EPX71941.1  [L=149]
Description: hypothetical protein SOCG_03875 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       305  (0.0170115); expected 358.6 (0.02)
Passed bias filter:                      245  (0.013665); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.28s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 1043.94
//
Query:       EPX71942.1  [L=682]
Description: CCR4-Not complex subunit Ccr4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.5e-26   93.3   0.0    2.6e-26   92.6   0.0    1.4  1  Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family
    1.7e-10   41.0   1.1    9.9e-05   22.6   0.6    2.9  2  LRR_4          Leucine Rich repeats (2 copies)
    3.2e-06   26.8   3.2    3.8e-05   23.3   1.4    2.4  2  LRR_8          Leucine rich repeat
  ------ inclusion threshold ------
      0.085   13.4   0.6         11    7.0   0.1    3.9  3  LRR_1          Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.6   0.0   5.9e-30   2.6e-26       1     233 []     331     656 ..     331     656 .. 0.92

  Alignments for each domain:
  == domain 1  score: 92.6 bits;  conditional E-value: 5.9e-30
                    EEEEESTG...........CHHHHTHHHHHHHHHHHHHHCTTSEEEEEEEBSCTCHHHHHHHHH......TTCEEEEECCH.....ECSSSTTSSE CS
                    xxxxxxxx...........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxx.....xxxxxxxxxx RF
  Exo_endo_phos   1 ltwNvngq...........aspalgssrrsdrladlltaydaDvlgLQEvdddelsriplllal......ggflgasstsp.....tgggggggng 74 
                    +++N++             +s+al +s+r d ++++l+ y+aD+++LQEvd    + + ++ +             +  ++         +   +g
     EPX71942.1 331 MSYNILCEryatstlygytPSWALAWSYRRDLIMQELAGYKADIICLQEVDVENFDTFFAPEMSikgykgV-----HFPKSrvrtmNELERRVVDG 421
                    79***************************************************999999999888544331.....333335667788888999** PP

                    EEEEECSTEEEEEEEEEEETSSSSGCEEEEEEEEEEEEEEE...................................................CCCH CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...................................................xxxx RF
  Exo_endo_phos  75 gavlsrfpltslfrrtfiefndlvaalrreplaakleqlni...................................................ashr 119
                    +a++++ + + +   + iefn+     r++   + + ++++                                                      r
     EPX71942.1 422 CATFFKTSKFFMHEKSIIEFNQAPSLRRQNIKLTSNMYNRVmtkdnisvmtmlesketghrlivanchihwdpqfrdvklmqvamlmdelaqVATR 517
                    ************************************************************************************************ PP

                    HGHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-SSSTSGGGBSCGHHHHHHCTTTH......H..............SSCESCETTTTTTTTTTT CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......x..............xxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos 120 dhdlvrdlqllalllqvealnadrgapvivaGDfNarpsdddsrvlrtrglalapap......v..............glyllgggptptyvtrag 195
                    +  l+ +l + +l++ +   ++ ++ pv+++GDfN++p +++  +l ++  + +++       +               +y+ +++  +t+ t+++
     EPX71942.1 518 FCSLPSKLPADYLKDSRPSYSDYTKIPVLICGDFNSVPGSGVLDFLSSGKVEQHHEDfmnndyGdytyngkshpfnlkSAYSETQELPFTNFTPGF 613
                    *********************************************************77666515566677888899******************* PP

                    EB-BEEEEEEC.HHHCCEEEEEEECCHHEEC........TSSCSSSB CS
                    xxxxxxxxxxx.xxxxxxxxxxxxxxxxxxx........xxxxxxxx RF
  Exo_endo_phos 196 gsrlDrilasp.alalfrsgvlppplalvrr........ealtlSDH 233
                     +++D+i++++ +l+  +++ + +      +        +a+ +SDH
     EPX71942.1 614 SGTIDYIWYTNaNLEATGLLKGVDRN----YlssivgfpNAHFPSDH 656
                    ***********999999999886654....34456***********9 PP

>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.6   2.2e-08   9.9e-05       3      39 ..     176     212 ..     174     218 .. 0.88
   2 !   15.8   0.0   3.1e-06     0.014       1      40 [.     220     259 ..     220     263 .. 0.90

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 2.2e-08
                 --EEE--SS---E-S-.HHH-TT--EEE-.-S-----G CS
       LRR_4   3 LevLdLsnNqltdipl.leklpnLkeLdLsgNnlitdl 39 
                 L++L++++N+l+ +p+ ++kl nL  Ld sgN +i+ +
  EPX71942.1 176 LTELYINHNKLSRLPSeIGKLRNLVILDASGN-NIKAI 212
                 9***************7778***********9.66666 PP

  == domain 2  score: 15.8 bits;  conditional E-value: 3.1e-06
                 SS--EEE--SS---E-S-.HHH-TT--EEE-.-S-----GG CS
       LRR_4   1 pnLevLdLsnNqltdipl.leklpnLkeLdLsgNnlitdld 40 
                 + L+++ L++N++  ip+ l+ l +Lk L + gN +++d++
  EPX71942.1 220 TELREVLLFDNMIAVIPPeLGTLYQLKILGVEGN-PLQDVY 259
                 679***************8888*********999.888875 PP

>> LRR_8  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   1.4   8.6e-09   3.8e-05       6      61 .]     156     209 ..     154     209 .. 0.94
   2 ?    2.6   0.0     0.027   1.2e+02       2      40 ..     221     258 ..     218     264 .. 0.81

  Alignments for each domain:
  == domain 1  score: 23.3 bits;  conditional E-value: 8.6e-09
                 EE-TTS--SEE-TTSSTT-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8   6 LdLsnNrltslddeaFkglsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61 
                 LdL    l +++ + Fk +s L++L++++N+l++l p  +  L++L  Ld sgN++
  EPX71942.1 156 LDLGGIGLRNVSTDLFK-FSFLTELYINHNKLSRL-PSEIGKLRNLVILDASGNNI 209
                 6777778999*******.9****************.9*****************97 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.027
                 T-SEEE-TTS--SEE-TTSSTT-TT--EEE--SS---GG CS
       LRR_8   2 nLtsLdLsnNrltslddeaFkglsnLkvLdLsnNllttl 40 
                 +L+++ L +N + ++++e  + l +Lk+L    N l+ +
  EPX71942.1 221 ELREVLLFDNMIAVIPPELGT-LYQLKILGVEGNPLQDV 258
                 688888999999999999988.99999998888877766 PP

>> LRR_1  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.1    0.0026        11       2      17 ..     176     191 ..     175     196 .. 0.85
   2 ?    0.6   0.0      0.31   1.4e+03       1      17 [.     198     214 ..     198     220 .. 0.78
   3 ?   -0.0   0.0       0.5   2.2e+03       2      14 ..     245     257 ..     244     271 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0026
       LRR_1   2 LrhLdLsnnpllglpp 17 
                 L++L++++n l++lp+
  EPX71942.1 176 LTELYINHNKLSRLPS 191
                 99*********88876 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.31
       LRR_1   1 nLrhLdLsnnpllglpp 17 
                 nL  Ld s+n++  +pp
  EPX71942.1 198 NLVILDASGNNIKAIPP 214
                 8999******9944444 PP

  == domain 3  score: -0.0 bits;  conditional E-value: 0.5
       LRR_1   2 LrhLdLsnnpllg 14 
                 L+ L +++npl +
  EPX71942.1 245 LKILGVEGNPLQD 257
                 99999*****944 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (682 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       488  (0.0272185); expected 358.6 (0.02)
Passed bias filter:                      312  (0.017402); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.61u 0.25s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 4844.58
//
Query:       EPX71943.1  [L=645]
Description: SAGA complex subunit/TATA-binding protein associated factor/transcription factor TFIID complex subunit Taf5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.2e-45  151.7  16.8    1.1e-09   38.7   0.2    6.7  6  WD40         WD domain, G-beta repeat
    4.4e-41  140.1   1.2    6.8e-41  139.5   1.2    1.3  1  TFIID_NTD2   WD40 associated region in TFIID subunit, NTD2 do
    1.1e-09   38.5   0.0      0.021   15.1   0.0    5.2  5  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    5.7e-06   26.1   0.1    1.8e-05   24.5   0.1    2.0  2  LisH         LisH
    4.3e-05   23.0   0.0      0.011   15.1   0.0    2.9  4  WD40_like    WD40-like domain
    0.00015   20.8   0.5        0.6    9.0   0.0    3.8  5  Ge1_WD40     WD40 region of Ge1, enhancer of mRNA-decapping p
  ------ inclusion threshold ------
      0.038   12.6   5.1        5.9    5.4   0.0    3.9  4  Nup160       Nucleoporin Nup120/160


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   1.4e-05     0.037       3      38 .]     317     353 ..     315     353 .. 0.80
   2 !   24.1   0.1   1.8e-08   4.7e-05       9      38 .]     377     407 ..     370     407 .. 0.89
   3 !   22.9   0.3   4.3e-08   0.00011       7      38 .]     417     449 ..     412     449 .. 0.91
   4 !   38.7   0.2   4.4e-13   1.1e-09       3      38 .]     455     491 ..     453     491 .. 0.97
   5 !   30.3   0.3   1.9e-10   4.9e-07       3      38 .]     497     533 ..     495     533 .. 0.95
   6 !   27.9   0.0   1.1e-09   2.8e-06       3      38 .]     539     575 ..     537     575 .. 0.93

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.4e-05
                 EEEEEESS...SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH...ssvtslafspdgawlasGsdDgtvriWd 38 
                 c++t   H   +s ++  fspd +++asG     +r+W+
  EPX71943.1 317 CMYT--FHdtnGSMNCAEFSPDTTMIASGFQESYIRLWS 353
                 4444..56543449************************5 PP

  == domain 2  score: 24.1 bits;  conditional E-value: 1.8e-08
                 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  H ++v++ +fspd+++l+s+s+D++ r+W+
  EPX71943.1 377 SHsGPVYGTKFSPDNKYLLSCSEDRSARLWS 407
                 59667*************************5 PP

  == domain 3  score: 22.9 bits;  conditional E-value: 4.3e-08
                 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++GH ++v++++f p g+++a++s D+t  +W+
  EPX71943.1 417 YKGHsGPVWDVSFGPFGHYFATASHDQTALLWS 449
                 89**777***************999*******5 PP

  == domain 4  score: 38.7 bits;  conditional E-value: 4.4e-13
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +lr++ GH s+v ++ f+p++a++++Gs D+t+r+Wd
  EPX71943.1 455 PLRVFAGHlSDVDCVTFHPNSAYVLTGSNDKTCRLWD 491
                 799*********************************9 PP

  == domain 5  score: 30.3 bits;  conditional E-value: 1.9e-10
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  +r++ GH ++vt++a  pdg+ +as+++Dg +++Wd
  EPX71943.1 497 SVRVFNGHtKPVTAVAIAPDGHTVASADYDGLIHLWD 533
                 6899****999****************99*******9 PP

  == domain 6  score: 27.9 bits;  conditional E-value: 1.1e-09
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  ++t +GH ++++sl+fs++++ l+sG+ D tvr Wd
  EPX71943.1 539 RIKTMKGHqGGIYSLSFSQESSVLVSGGADYTVRAWD 575
                 67899***888*************************9 PP

>> TFIID_NTD2  WD40 associated region in TFIID subunit, NTD2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.5   1.2   2.6e-44   6.8e-41       2     130 .]      52     183 ..      51     183 .. 0.98

  Alignments for each domain:
  == domain 1  score: 139.5 bits;  conditional E-value: 2.6e-44
                 XXXHHHHHHHHHHHHHHHTS-HHHHHHHGGGHHHHHHHHHHHHHHTT-HHHHHHHHHHHGGGGGGGHH.HHHHHTT--SHHHHHHSHHHHHHHHS-EEE CS
  TFIID_NTD2   2 kdpekyekayelLkkwiessldiykpeLsrllyPvFvhlyLelvakgaeeeakkFfekfkedhealhkedlkkLasisspehleenelakafrenkyri 100
                 ++p+ y ++y+lL++w++ssl++yk+eL+r+l+P+Fvh++L+l++ +  ++ak+F++ f +dhe+lh+ d+k L+s+s p+h++e+++a+++r+nky++
  EPX71943.1  52 ETPDAYAHTYTLLRDWVDSSLELYKSELRRILFPIFVHSFLDLLSLDRYDAAKQFYDMFMKDHEDLHSWDVKCLKSLSLPSHVDEDPVAQQYRKNKYQL 150
                 5799*********************************************************************************************** PP

                 EEEHHHHHHHHHHHHHTT-H...HHHHHHHHHE CS
  TFIID_NTD2 101 klskaafelLlrfLeekeka...vllkilnehl 130
                 ++s+ +f+lLl+fL e+ ++   v+++++n+h+
  EPX71943.1 151 NFSRITFDLLLHFLFENISNggtVIIQLINRHV 183
                 ****************9999999*******985 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0     0.019        50      35      77 ..     322     364 ..     303     375 .. 0.81
   2 ?    4.8   0.0     0.014        35      38      81 ..     379     422 ..     373     451 .. 0.85
   3 !    7.8   0.0    0.0016         4      39      81 ..     464     506 ..     456     509 .. 0.88
   4 !   15.1   0.0   8.4e-06     0.021      37      90 ..     504     556 ..     499     558 .. 0.89
   5 !    5.7   0.0    0.0068        18      28      72 ..     539     581 ..     536     593 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.019
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhsls 77 
                  ++++++ ++ +++pd +++a +++++ +rl + +  k  ++ +
   EPX71943.1 322 HDTNGSMNCAEFSPDTTMIASGFQESYIRLWSLKPDKKSSTRT 364
                  56778888999*******************9998777665555 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.014
  ANAPC4_WD40  38 dsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  ++ v + +++pd+k L    +d + rl ++ +++ + +++ +s 
   EPX71943.1 379 SGPVYGTKFSPDNKYLLSCSEDRSARLWSVDTKTALVAYKGHSG 422
                  56788899***********************9999998887776 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.0016
  ANAPC4_WD40  39 sevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  s v ++ ++p+      + +d ++rl d++ g+ v+ ++ +++
   EPX71943.1 464 SDVDCVTFHPNSAYVLTGSNDKTCRLWDVHRGHSVRVFNGHTK 506
                  68999*****************************999887665 PP

  == domain 4  score: 15.1 bits;  conditional E-value: 8.4e-06
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  + + v+++a  pdg+  a a  dg ++l d+ sg+ +++++ ++   + +l+++
   EPX71943.1 504 HTKPVTAVAIAPDGHTVASADYDGLIHLWDIGSGRRIKTMKGHQGG-IYSLSFS 556
                  7889************************************999994.8888876 PP

  == domain 5  score: 5.7 bits;  conditional E-value: 0.0068
  ANAPC4_WD40  28 rvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkv 72 
                  r+ t+  +++++ + sL+++++ ++L+ + +d +vr  d+ +++ 
   EPX71943.1 539 RIKTM--KGHQGGIYSLSFSQESSVLVSGGADYTVRAWDVLKTNY 581
                  55555..789999************************99988765 PP

>> LisH  LisH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   0.1   6.9e-09   1.8e-05       1      27 []      10      36 ..      10      36 .. 0.96
   2 ?   -3.1   0.0       3.6   9.2e+03      12      19 ..     340     347 ..     339     348 .. 0.82

  Alignments for each domain:
  == domain 1  score: 24.5 bits;  conditional E-value: 6.9e-09
                HHHHHHHHHHHHHCT-HHHHHHHHHHT CS
        LisH  1 eeLNrLIydYLvkeGyeetAeaFekEa 27
                ++LNr+++dYL k+Gy  t ++++ Ea
  EPX71943.1 10 QDLNRIVLDYLAKKGYARTEAMLRLEA 36
                79*********************9997 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 3.6
                 HHCT-HHH CS
        LisH  12 vkeGyeet 19 
                 +++G++e+
  EPX71943.1 340 IASGFQES 347
                 789**997 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.22   5.5e+02       2      36 ..     381     415 ..     380     425 .. 0.88
   2 !   15.1   0.0   4.2e-06     0.011       5      79 ..     468     543 ..     464     548 .. 0.84
   3 !    8.3   0.0   0.00051       1.3     249     296 ..     519     567 ..     513     572 .. 0.87
   4 ?    2.8   0.0     0.024        62       3      41 ..     550     589 ..     548     595 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.22
   WD40_like   2 eiYsidiskkgslilyGgkddkctvlkleslesvs 36 
                 ++Y   +s++++++l  ++d  +++ ++++++   
  EPX71943.1 381 PVYGTKFSPDNKYLLSCSEDRSARLWSVDTKTALV 415
                 69999************************998765 PP

  == domain 2  score: 15.1 bits;  conditional E-value: 4.2e-06
   WD40_like   5 sidiskkgslilyGgkddkctvlkleslesvsivesfedSvifvkllddd.lilvvtlDGtillslleneeevene 79 
                  + + +++ ++l G++d++c++ +++ ++sv ++++ +  v  v +  d   +  +  DG i l ++  +  +++ 
  EPX71943.1 468 CVTFHPNSAYVLTGSNDKTCRLWDVHRGHSVRVFNGHTKPVTAVAIAPDGhTVASADYDGLIHLWDIGSGRRIKTM 543
                 577889************************************99988665155667899***88888887777665 PP

  == domain 3  score: 8.3 bits;  conditional E-value: 0.00051
   WD40_like 249 vvafsTlcgkvgigDiRdketfkllesgvGviydmkfennt.iyvgGea 296
                 +va + ++g++ + Di +++ +k ++++ G iy++ f ++  ++v G a
  EPX71943.1 519 TVASADYDGLIHLWDIGSGRRIKTMKGHQGGIYSLSFSQESsVLVSGGA 567
                 6788899******************************988767777765 PP

  == domain 4  score: 2.8 bits;  conditional E-value: 0.024
   WD40_like   3 iYsidiskkgslilyGgkddkctvlkl.eslesvsivesf 41 
                 iYs+ +s+++s+++ Gg d +++  ++ +++ s s+  s+
  EPX71943.1 550 IYSLSFSQESSVLVSGGADYTVRAWDVlKTNYSDSVSGSL 589
                 9*******************99988752444455555555 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1      0.79     2e+03     208     239 ..     101     129 ..      95     142 .. 0.74
   2 !    6.4   0.0    0.0015       3.9     185     224 ..     322     362 ..     306     377 .. 0.81
   3 ?   -0.4   0.0      0.17   4.4e+02     183     217 ..     374     409 ..     357     425 .. 0.75
   4 ?   -0.2   0.0      0.15   3.9e+02     175     210 ..     408     444 ..     397     450 .. 0.81
   5 !    9.0   0.0   0.00024       0.6     184     216 ..     501     534 ..     468     578 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.79
    Ge1_WD40 208 dGevkffqvyledeeeprCLheWkPhdGksls 239
                 d   +f+ ++++d+e+   Lh W     ksls
  EPX71943.1 101 DAAKQFYDMFMKDHED---LHSWDVKCLKSLS 129
                 6667899999998765...8888766666665 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0015
    Ge1_WD40 185 eehs.liveaafspdGtalatasedGevkffqvyledeeep 224
                 +++   + +a fspd t +a   ++ +++++ +   ++++ 
  EPX71943.1 322 HDTNgSMNCAEFSPDTTMIASGFQESYIRLWSLKPDKKSST 362
                 45544799**********************98876665555 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.17
    Ge1_WD40 183 kieehs.liveaafspdGtalatasedGevkffqvy 217
                 ++ +hs  +  + fspd   l  +sed   +++ v 
  EPX71943.1 374 RLLSHSgPVYGTKFSPDNKYLLSCSEDRSARLWSVD 409
                 444555489999999999999999999999999885 PP

  == domain 4  score: -0.2 bits;  conditional E-value: 0.15
    Ge1_WD40 175 eeieegllkieehs.liveaafspdGtalatasedGe 210
                  +++++l+  + hs  + + +f p G   atas+d +
  EPX71943.1 408 VDTKTALVAYKGHSgPVWDVSFGPFGHYFATASHDQT 444
                 567788899999998899***************9965 PP

  == domain 5  score: 9.0 bits;  conditional E-value: 0.00024
    Ge1_WD40 184 ieehs.liveaafspdGtalatasedGevkffqv 216
                 ++ h+  ++  a++pdG ++a a  dG+++++ +
  EPX71943.1 501 FNGHTkPVTAVAIAPDGHTVASADYDGLIHLWDI 534
                 455663689999*******************988 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0     0.071   1.8e+02     224     276 ..     329     381 ..     322     388 .. 0.78
   2 ?    5.4   0.0    0.0023       5.9     229     252 ..     390     413 ..     382     417 .. 0.88
   3 ?    4.2   0.0    0.0053        14     223     255 ..     466     500 ..     464     512 .. 0.85
   4 ?    1.2   0.2     0.042   1.1e+02     223     264 ..     553     603 ..     518     633 .. 0.66

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.071
                 .......TTTEEEEEETT-EEEEEETTTTEEEEEEE--.-SSSTTS--SSEESEE CS
      Nup160 224 avvei..gqtylfalsrdgkLrvWnlltgkclatidllrdeeaqdessskstldp 276
                  ++e   + t++++  +   +r+W+l+ +k  +t++++  e + d+ +  s+++p
  EPX71943.1 329 NCAEFspDTTMIASGFQESYIRLWSLKPDKKSSTRTTN--EPTSDSTRLLSHSGP 381
                 45555568999999999999**************9999..666666666666666 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.0023
                 TTTEEEEEETT-EEEEEETTTTEE CS
      Nup160 229 gqtylfalsrdgkLrvWnlltgkc 252
                 +++yl++ s d+  r+W+++t++ 
  EPX71943.1 390 DNKYLLSCSEDRSARLWSVDTKTA 413
                 899******************976 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.0053
                 T.......TTTEEEEEETT-EEEEEETTTTEEEEE CS
      Nup160 223 vavvei..gqtylfalsrdgkLrvWnlltgkclat 255
                 v++v+   +++y+++ s d++ r+W++  g  +++
  EPX71943.1 466 VDCVTFhpNSAYVLTGSNDKTCRLWDVHRGHSVRV 500
                 577877889******************98777665 PP

  == domain 4  score: 1.2 bits;  conditional E-value: 0.042
                 T.....TTTEEEEEETT-EEEEEETTTTEEEEE..EE--.........-SSS CS
      Nup160 223 vavveigqtylfalsrdgkLrvWnlltgkclat..idll........rdeea 264
                  ++++ ++++l++   d+++r+W++l      +  ++l         ++e +
  EPX71943.1 553 LSFSQ-ESSVLVSGGADYTVRAWDVLKTNYSDSvsGSLAgsvvtpysNTESD 603
                 55666.8888999999********9754433332344446666666533333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (645 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       512  (0.0285571); expected 358.6 (0.02)
Passed bias filter:                      451  (0.0251548); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.67u 0.28s 00:00:00.95 Elapsed: 00:00:00.46
# Mc/sec: 4246.82
//
Query:       EPX71944.1  [L=1833]
Description: separase/separin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   4.1e-137  457.5   0.0   8.4e-137  456.5   0.0    1.6  1  Peptidase_C50  Peptidase family C50
      0.003   17.6   0.3        8.4    6.8   0.0    3.7  3  TPR_2          Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.028   14.9   0.2          9    6.9   0.0    3.1  3  TPR_19         Tetratricopeptide repeat
      0.035   14.4   1.3        9.8    6.5   0.1    3.7  3  TPR_12         Tetratricopeptide repeat
       0.14   11.6   0.0       0.83    9.0   0.0    2.0  2  CHAT           CHAT domain


Domain annotation for each model (and alignments):
>> Peptidase_C50  Peptidase family C50
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  456.5   0.0  2.4e-140  8.4e-137       2     395 .]    1383    1768 ..    1382    1768 .. 0.97

  Alignments for each domain:
  == domain 1  score: 456.5 bits;  conditional E-value: 2.4e-140
                     TSSEEEEEEEETTSTEEEEEEECCCCCC...HH....HHHHHHHHHHHHHHHHHHHHCHCCHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTT CS
  Peptidase_C50    2 dkkdLllsrleagssplvlrlplerassrdadeevlsfeevkeelkeiieesnestksakdvktkeakkeWWkeReeLDkrLkeLleniekvwL 95  
                     +k++L++++l+++  pl++rlpl+r+ss+  de+vlsf+++++ + +ii +sne++++ kd++tk++k++WWk+R+eLD+ L +Ll+nie  wL
     EPX71944.1 1383 SKEELFVTKLRKEAAPLIFRLPLKRHSSQAVDEDVLSFDKAQSAFGKIIAKSNETAQNGKDYTTKQDKESWWKQRRELDSSLAKLLKNIELFWL 1476
                     689******************************************************************************************* PP

                     GGGGGGGS-E---HHHHHHHHHHHHHHHHHHSCHHHHSCHCCCCHTBTHHHHHHHHTCHTT.TTTHHHHHHHHHHHHHHHHHHTT....GGGS. CS
  Peptidase_C50   96 ggfkgilsqeerekellekfqkkfekilkkhlpsrkqkkkekkklelddrllelflglgda.eedldeeledllyfvvdilqfhgernaydeid 188 
                     ggfkgi+s+++ +  l+ kf +++ +i++k+l    + +   + +el++ +lelf++lg++ ++++d+ ledl+yfv+di+qfhg + ayde+d
     EPX71944.1 1477 GGFKGIFSNHKPDMGLFLKFIHQLYDIMRKNL----NFSDLGNTIELSSGILELFVSLGSPdQDNVDQLLEDLIYFVLDIYQFHGLQFAYDEVD 1566
                     ********************************....4566789****************99888999*************************** PP

                     HHHHHHHHHHHHHHHHCCHHHCE....SEEEEEE-TTCTTS-GGGSTTTTTS-EEEES-HHHHHHHHHHHCTTGCSEEEESTSTEEEEE-TTS- CS
  Peptidase_C50  189 fdslvvellealkeyeeaakeekkkekehtiLvldkelqalPWEslpiLrgqsvsRvpSleslrellekskekeegekvsksskgtyiLnPsgD 282 
                     +d++++++++al+ y+++++ ek  +++ht+L ldk ++++PWEslp+L++ svsR+pS+++l + + k+ ++e   kv+ + +g+yiLnPs D
     EPX71944.1 1567 MDQMIIDVKDALRVYHNNYDPEK--STSHTVLLLDKMVHKFPWESLPCLQQLSVSRLPSISILKSIICKEVRPEPFIKVNID-SGSYILNPSLD 1657
                     ****************9877764..68****************************************999999999999999.9********** PP

                     SHHHHHHHHHHHHHHCCT-EEEESS---HHHHHHHHHHSSEEEEESSTTSTTTS-HHHHTT.S--SEEEEESTTTT--ECTTTCECCSHHHHHH CS
  Peptidase_C50  283 LksTqetfeewleklekgwkgivgraPteeeleeaLkssdlflYfGHGsGaqYirsreirklercaatlLmGCSSgalkeaGefepsGtvlnYl 376 
                     Lk+Tq+ fe  l+ +  gw+gi+gr+P++ee++++L++ d+flYfGHG+G+qY +sr++  l++ca+++LmGCSSgal+e+G +ep Gt+lnYl
     EPX71944.1 1658 LKHTQDMFEAELSAT--GWRGIIGRSPSNEEYRSMLSDYDFFLYFGHGGGEQYTTSRDLAALNKCAVSILMGCSSGALHECGIYEPWGTPLNYL 1749
                     ************974..7**************************************************************************** PP

                     HTT-SEEEEESS--BHHHH CS
  Peptidase_C50  377 lagcpavvanLWDVTDkDI 395 
                      agc ++vanLWDVTDkDI
     EPX71944.1 1750 GAGCQTLVANLWDVTDKDI 1768
                     ******************9 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       1.8   6.6e+03       7      28 ..     837     858 ..     836     862 .. 0.84
   2 !    6.8   0.0    0.0023       8.4       6      32 ..     985    1011 ..     981    1013 .. 0.88
   3 !    6.5   0.0     0.003        11       1      25 [.    1143    1167 ..    1143    1169 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1.8
       TPR_2   7 lGlayyklgdyeeAleafekAl 28 
                 l++ y  lg   +A+ +f +A 
  EPX71944.1 837 LANKYVSLGFSGKAHLCFSRAY 858
                 7888888888899*****9996 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0023
       TPR_2    6 nlGlayyklgdyeeAleafekAleldP 32  
                    +++y+++g++ eA  + ++A  l++
  EPX71944.1  985 LTAQIYEHMGQLREAMYFTKQACLLEE 1011
                  669*******************98876 PP

  == domain 3  score: 6.5 bits;  conditional E-value: 0.003
       TPR_2    1 aealynlGlayyklgdyeeAleafe 25  
                  a++l +++l+ +k+g+++eA+ +++
  EPX71944.1 1143 AKVLQRIALIEIKRGNLDEARSLMK 1167
                  68999***************98876 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       1.4   5.1e+03      32      45 ..     987    1000 ..     983    1005 .. 0.87
   2 ?    6.9   0.0    0.0025         9      28      60 ..    1023    1054 ..     992    1060 .. 0.77
   3 ?    4.5   0.0     0.014        51      25      64 ..    1143    1183 ..    1137    1190 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 1.4
      TPR_19   32 AeallalgqldeAe 45  
                  A+++  +gql eA+
  EPX71944.1  987 AQIYEHMGQLREAM 1000
                  9999******9995 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0025
      TPR_19   28 rllLAeallalgqldeAealLdalpeedpddar 60  
                  +l L+ +l ++g++de e +++++ + ++  + 
  EPX71944.1 1023 KLSLCSLLAKAGRIDESEVIIQEIADLEQS-SS 1054
                  456799********************9998.54 PP

  == domain 3  score: 4.5 bits;  conditional E-value: 0.014
      TPR_19   25 aearllLAeallalgqldeAealLdalpeedpdd.aryasL 64  
                  a ++ + A + ++ g+ldeA+ l++a   ++  d +++ sL
  EPX71944.1 1143 AKVLQRIALIEIKRGNLDEARSLMKASSGKFIGDfSNVVSL 1183
                  5556667888999**********999877666666666666 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.24   8.4e+02      49      67 ..     984    1002 ..     977    1007 .. 0.58
   2 ?    6.5   0.1    0.0027       9.8       8      74 ..    1025    1088 ..    1018    1090 .. 0.90
   3 ?    3.5   0.0     0.025        89       3      28 ..    1143    1168 ..    1139    1170 .. 0.68

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.24
      TPR_12   49 rnLgrlyralgryeeAlel 67  
                  +  +++y+ +g+++eA ++
  EPX71944.1  984 NLTAQIYEHMGQLREAMYF 1002
                  3445666666666666555 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0027
      TPR_12    8 nlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealai 74  
                   l ++l+++gr de++ + ++  ++ +++    h  +++ l n  + y   g++   ++++ ++l++
  EPX71944.1 1025 SLCSLLAKAGRIDESEVIIQEIADLEQSS--SFHQKYLWNLVNAEIDY-SKGELNGSIRRYSQCLDL 1088
                  68899**********************99..99999***********9.778999999999999987 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.025
      TPR_12    3 atalnnlaavlrrlgrydeAlellek 28  
                  a++l ++a+++ ++g++deA++l ++
  EPX71944.1 1143 AKVLQRIALIEIKRGNLDEARSLMKA 1168
                  44554578888888888888877655 PP

>> CHAT  CHAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.21   7.4e+02      22      47 ..    1589    1614 ..    1568    1634 .. 0.72
   2 ?    9.0   0.0   0.00023      0.83     178     249 ..    1710    1779 ..    1684    1802 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.21
                  xxxxxxxxxxxxxxxxxxxxxxxxxx RF
        CHAT   22 qsvrqlvivpdgeLqliPfealvdpd 47  
                  +s+ + v+++d+ ++ +P+e l+  +
  EPX71944.1 1589 KSTSHTVLLLDKMVHKFPWESLPCLQ 1614
                  455599**************997654 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00023
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        CHAT  178 taeeilelnldgaelVvLsACqtglgevidgegvlgLaralllaGarsviaslwpVddeatalLmkrfyqnl 249 
                  t +++++  l+++ + +L  C +g+ +  + ++  g     l+aG ++++a+lw V d+   ++  ++ +++
  EPX71944.1 1710 TSRDLAA--LNKCAVSILMGCSSGALHECGIYEPWGTPLNYLGAGCQTLVANLWDVTDKDIDRFSGAMLSYW 1779
                  6677777..7778999999999997777799999999999*******************9999998887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1833 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       605  (0.0337442); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.93u 0.31s 00:00:01.24 Elapsed: 00:00:00.46
# Mc/sec: 11990.82
//
Query:       EPX71945.1  [L=300]
Description: serine hydrolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.3e-53  179.1   0.0      1e-52  178.8   0.0    1.0  1  Hydrolase_4    Serine aminopeptidase, S33
    1.9e-16   61.4   0.0    2.3e-16   61.1   0.0    1.1  1  Abhydrolase_6  Alpha/beta hydrolase family
    3.1e-16   59.8   0.6      6e-14   52.3   0.6    2.3  1  Abhydrolase_1  alpha/beta hydrolase fold
     0.0002   21.0   0.0    0.00026   20.6   0.0    1.2  1  LIDHydrolase   Lipid-droplet associated hydrolase
  ------ inclusion threshold ------
      0.015   14.8   0.1        5.5    6.4   0.0    2.3  2  Peptidase_S9   Prolyl oligopeptidase family
       0.03   13.5   0.0      0.045   12.9   0.0    1.2  1  Cas_Cas1       CRISPR associated protein Cas1
       0.13   11.9   0.0       0.18   11.4   0.0    1.3  1  Esterase       Putative esterase
       0.18   10.8   0.0       0.27   10.3   0.0    1.3  1  DUF1749        Protein of unknown function (DUF1749)


Domain annotation for each model (and alignments):
>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.8   0.0   4.6e-56     1e-52       3     238 ..      16     255 ..      14     256 .. 0.94

  Alignments for each domain:
  == domain 1  score: 178.8 bits;  conditional E-value: 4.6e-56
  Hydrolase_4   3 pkavvvlvHGlaehsgryaelaeaLaaqGfavyalDhrGhGrse...gkrghvpsfddyvdDlaafvekvkeehpelplfllGhSmGGliallyl..l 95 
                  p a v+++HG++eh++ y e++e L++++++v+++D+rG+Grs+     +g    +++ + D++ +v+++     +lplfl+GhSmGG ++l+y+   
   EPX71945.1  16 PVARVLFIHGFGEHANLYPEFFEFLNQRNIEVFCFDQRGFGRSKkspKFQGCSGGWKQQLPDIDYHVQRAS--DTNLPLFLMGHSMGGGLSLRYGmiG 111
                  7899****************************************9987888999************99888..7789******************999 PP

  Hydrolase_4  96 rypdkvaglilsaPalkikaklk.appllklllkllgkllpklqv.snnlkadslsrdpevvaayeadplvhgkitvrlllelldamkrleeraakit 191
                  +++++++g+i  aP+l+ ++++k    l+k  l  +++++p+++  ++ +++++ +rd+++++++ +dpl +   ++++l++l++  ++++e+a++++
   EPX71945.1 112 DHRKNLKGVIAQAPMLQNHPDTKpGYLLYK-SLSAVSRVMPNFTWnTKIMETKKGTRDQKMMDRILSDPLASSVGSLETLRDLINCSQQTLEEANQFH 208
                  9********************885555555.699999999*99995556799********************************************** PP

  Hydrolase_4 192 lPllllhGeaDkvvdpeasrelyerlgskdktlklypglyHellnEp 238
                  lPll+ hG++D++  +eas+e+ye+++s+dkt+   p + H+   E+
   EPX71945.1 209 LPLLIAHGTDDNINLYEASQEFYEHASSRDKTFLSLPDCQHSPNIEQ 255
                  *****************************************988876 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.1   0.0     1e-19   2.3e-16       1     216 [.      20     259 ..      20     261 .. 0.67

  Alignments for each domain:
  == domain 1  score: 61.1 bits;  conditional E-value: 1e-19
                    EEEE--GC.....GCHHHHHHHHCCT.CEEEEE--TTSTS-GGCS..........--HHHCHHHHHHHCCTT..TTSEEEEEETCHHHHHHHHHHC CS
  Abhydrolase_6   1 vlllHGagssassWlvapLaallaag.vhvlapDlpGhGrsdppp..........ldledladlaalldelaagggpvvlvGHSlGGalalaaapl 85 
                    vl++HG+g +a  +   ++ ++l+++ ++v+++D +G+Grs  +p            l+d  d++ + ++      p +l+GHS+GG l+l+   +
     EPX71945.1  20 VLFIHGFGEHANLYP--EFFEFLNQRnIEVFCFDQRGFGRSKKSPkfqgcsggwkQQLPD-IDYHVQRASDT--NLPLFLMGHSMGGGLSLR---Y 107
                    89****886655554..7788888888999*********886666777777555555555.66633333332..6778**************...6 PP

                    C.........EE.EEES-..----TTTS----TTHH...HHHHTT-CCCCHCCH...........S-HSCCCCHHHCCCCHCHCCCGHHHHCCHHC CS
  Abhydrolase_6  86 a.......lvvg.vlldppptalpagllaaalelll...allallrllawlsre...........plprlfladedadaawrarlarlaallaglg 159
                             + g ++ +p  +   +++  +   l++   a+ ++ + ++w ++            +++ ++l+d+   a+ +  l +l++l ++  
     EPX71945.1 108 GmigdhrkNLKGvIAQAP--MLQNHPDTKPGYLLYKslsAVSRVMPNFTWNTKImetkkgtrdqkMMD-RILSDPL--ASSVGSLETLRDLINCSQ 198
                    666566663344799999..766666655555555512144446666899944444556765563444.7777777..777777777777777666 PP

                    .HTTCCHHTT-TTGCEEECTT-C......HHHHCHHCCCHSTTEEETCE...SSS-HHH.HSHHH CS
  Abhydrolase_6 160 .llpaaawadlpvpllvlggeDp......lvprllerllaqagarlpvvlpgaGHlphl.eepde 216
                     +l  a+ ++lp ++   +g+D+      + ++++e++   +++++   lp++ H+p++ +epd+
     EPX71945.1 199 qTLEEANQFHLPLLI-A-HGTDDninlyeASQEFYEHASS-RDKTF-LSLPDCQHSPNIeQEPDR 259
                    233444555555444.3.455555*999988899998888.*****.9***********447776 PP

>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.3   0.6   2.7e-17     6e-14       3     255 ..      20     254 ..      18     256 .. 0.81

  Alignments for each domain:
  == domain 1  score: 52.3 bits;  conditional E-value: 2.7e-17
                    EEEE-STTTCGGGGTTGHHHHHHHHTTSEEEEEEETTSTTSSSTTTGB....CHHSHHHHHHHHHHH..HHHCTTSSEEEEEETHHHHHHHHHHHH CS
  Abhydrolase_1   3 lvilhGlpgssdvwaerglapaLakdgfdvillDlrGvgySspapacin...ddygtasvaddldri..ldalgddkltlvGhSmGGmialayaae 93 
                    ++++hG+++ ++++ e  +++ L+++  +v+++D+rG+g+S+++p   +     +       d+d+   +++  + +l l+GhSmGG ++l y   
     EPX71945.1  20 VLFIHGFGEHANLYPE--FFEFLNQRNIEVFCFDQRGFGRSKKSPKF-QgcsGGWKQ--QLPDIDYHvqRASDTNLPLFLMGHSMGGGLSLRYGMI 110
                    8***************..***************************83.346522233..55666644223333444556**************987 PP

                    H..GGGEEEEEEESECSSCCHHHHHHHHHHHHHHCHHCHHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHCHHHCCHHHHHHHCHHHHHHHHH CS
  Abhydrolase_1  94 y..perVkalvllgaidpaaslieaqrqqaksfpdffdgyaadcarnpagplladelaaleqrhrlvdalkfpdkskrfpssgsdnasslatgalk 187
                        ++ k++++ ++         +q + + ++ + + +   +  r   +  ++ +   +   +r       +++++r+ s+  + ++++  +   
     EPX71945.1 111 GdhRKNLKGVIAQAP--------MLQNHPDTKPGYLLYKSLSAVSRVMPNFTWNTKIMETKKGTRD------QKMMDRILSDPLASSVGSLETLRD 192
                    766999*********........6677777777777777777777777777888888888888875......9****************9999999 PP

                    HHHHHHHCCHHHHHHHHHCTHHHHSEEEEEEETTCSSSCH.HHHHHHHHCHTS.EEEEEEETCSSSHHHH CS
  Abhydrolase_1 188 sieqwpttdsaklllrlrelknvlaptlvisgtsDplvpp.kaledlaqllpk.krlvvisdagHlafle 255
                     i+  ++t++ +  +++        p l+ +gt+D++  +  ++e+++++ ++ k+ + ++d++H  ++e
     EPX71945.1 193 LINCSQQTLEEA--NQFHL------PLLIAHGTDDNINLYeASQEFYEHASSRdKTFLSLPDCQHSPNIE 254
                    999999888877..55556......***************88888888884445***********99887 PP

>> LIDHydrolase  Lipid-droplet associated hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   1.2e-07   0.00026      16     143 ..      31     149 ..      18     203 .. 0.85

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 1.2e-07
  LIDHydrolase  16 eFYetFlsllseklnpelevlgishaGfeleeeekeakenekvfsLedQiehkedflkellekaksekdvklilvGHSvGaYiale..vlkrlsers 110
                   + Y +F + l+++   ++ev +  ++Gf  ++++       k  + ++  + +   ++++++ ++s+++  l l+GHS G  ++l+  ++ +++++ 
    EPX71945.1  31 NLYPEFFEFLNQR---NIEVFCFDQRGFGRSKKS------PKFQGCSGGWKQQLPDIDYHVQ-RASDTNLPLFLMGHSMGGGLSLRygMIGDHRKN- 116
                   6799*********...8***********999999......6777788888888999*****8.7799****************9985577799998. PP

  LIDHydrolase 111 ikkvvlLfPtiediakSpngkkltkllaylpfl 143
                    k+v+   P++++  +++ g +l k l  ++ +
    EPX71945.1 117 LKGVIAQAPMLQNHPDTKPGYLLYKSLSAVSRV 149
                   ************999999998888775555444 PP

>> Peptidase_S9  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0    0.0026       5.9      66     101 ..      92     129 ..      37     142 .. 0.84
   2 ?    6.4   0.0    0.0025       5.5     142     208 ..     207     273 ..     186     276 .. 0.76

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0026
                   EEEEEETHHHHHHH..HHHHH-GGG-SEEEEESE---C CS
  Peptidase_S9  66 laitGgSyGGyltg..aalnqrpdlFkaavaevpvvdv 101
                   l+++G+S GG l++   +++++ +  k+++a++p++ +
    EPX71945.1  92 LFLMGHSMGGGLSLryGMIGDHRKNLKGVIAQAPMLQN 129
                   789*******98862257889*************9765 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0025
                   ---EEEEEEETT-SSS-THHHHHHHHHHH--S-SEEEEEETTS-S..STTSSHHHHHHHHHHHHHHHHH CS
  Peptidase_S9 142 aypplLlihGlaDdrvppaealklvaaLqkkgknvlllifpdegH..gvgkprakveelarllaFlkea 208
                      plL+ hG+ D+   ++ + ++++   +++k++l l  pd +H   + ++ ++   l+++ +++ ++
    EPX71945.1 207 FHLPLLIAHGTDDNINLYEASQEFYEHASSRDKTFLSL--PDCQHspNIEQEPDRTLYLNQVCDWIHKH 273
                   6789**************************99997655..55555446666666666777777777665 PP

>> Cas_Cas1  CRISPR associated protein Cas1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0     2e-05     0.045      17      72 ..       4      59 ..       2      76 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2e-05
                EEEEESSEEEEEEECCCEEEEEEEST.EEEEHHHHHHHHHTT-EEEEE-TTS-EEEE CS
    Cas_Cas1 17 lvvekegeekkeiplediesivifge.vslstkalrllaekgipvvflsengkylgr 72
                l+v++  + +ke p+ ++  i  fge ++l +++ ++l +++i+v  ++++g  +++
  EPX71945.1  4 LYVKDYTD-TKETPVARVLFIHGFGEhANLYPEFFEFLNQRNIEVFCFDQRGFGRSK 59
                66777655.89***************9************************976655 PP

>> Esterase  Putative esterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   7.9e-05      0.18     106     159 ..      78     157 ..      60     239 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 7.9e-05
                 HHHHCSEECCC...EEEEEETHHHHHHHHHHHC..STTTCCEEEEES--S-CC.....................HCHHHC CS
    Esterase 106 ldanfrtapdg...ravaGqSmGGlgALilalk..hpdrFgsvssfSpivnps.....................namWgq 159
                 +d + + a+d      ++G+SmGG  +L +++   h +  + v++++p+++                       n  W +
  EPX71945.1  78 IDYHVQRASDTnlpLFLMGHSMGGGLSLRYGMIgdHRKNLKGVIAQAPMLQNHpdtkpgyllykslsavsrvmpNFTWNT 157
                 55555555555577889***********9998666************999877777777777777777777776555555 PP

>> DUF1749  Protein of unknown function (DUF1749)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00012      0.27     105     143 ..      90     126 ..      76     188 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00012
     DUF1749 105 ekvvlmGHstGsqdvlyYltssnerdrekvdgailqapv 143
                   + lmGHs G    l Y + + +  r++++g i+qap+
  EPX71945.1  90 LPLFLMGHSMGGGLSLRYGMIGDH--RKNLKGVIAQAPM 126
                 55789*************999855..***********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (300 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2333.92
//
Query:       EPX71946.1  [L=187]
Description: hypothetical protein SOCG_03880 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0074   16.4   0.2     0.0074   16.4   0.2    3.5  3  Cir_N     N-terminal domain of CBF1 interacting co-repressor 


Domain annotation for each model (and alignments):
>> Cir_N  N-terminal domain of CBF1 interacting co-repressor CIR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.2   4.2e-07    0.0074       1      20 [.      10      29 ..      10      43 .. 0.86
   2 ?    0.2   5.3      0.05     9e+02      17      31 ..      70      84 ..      69      86 .. 0.67
   3 ?   -0.7   2.7     0.094   1.7e+03      22      32 ..     144     154 ..     138     163 .. 0.56

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 4.2e-07
                SS-TTSHHHHHHHHHHHHHH CS
       Cir_N  1 SWHPgllkNqerVWkaEqka 20
                SW++ + kN+erV+++E+ a
  EPX71946.1 10 SWNVYSEKNVERVRRDEELA 29
                9****************976 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.05
                HHHHHHHHHHHHHHH CS
       Cir_N 17 EqkaleEkkkieerk 31
                Eq++++E+ ++e +k
  EPX71946.1 70 EQEEKQEHNRQELYK 84
                677777777777665 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.094
                 HHHHHHHHHHH CS
       Cir_N  22 eEkkkieerkk 32 
                 +Ekk++e   k
  EPX71946.1 144 DEKKREERVYK 154
                 45555554433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1535  (0.0856155); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 1420.53
//
Query:       EPX71947.1  [L=1140]
Description: Smc5-6 complex SMC subunit Smc6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      5e-26   91.5   0.0    1.2e-25   90.3   0.0    1.7  1  SMC_N         RecF/RecN/SMC N terminal domain
      1e-14   55.6   5.5      1e-14   55.6   5.5    6.0  4  AAA_23        AAA domain
    9.4e-05   22.4   5.0      0.016   15.0   0.3    3.1  2  AAA_21        AAA domain, putative AbiEii toxin, Type IV TA s
    0.00032   20.5  25.5    0.00032   20.5  25.5    3.7  2  AAA_15        AAA ATPase domain
    0.00033   20.3   0.0    0.00063   19.4   0.0    1.5  1  AAA_29        P-loop containing region of AAA domain
  ------ inclusion threshold ------
      0.014   15.6   1.0      0.062   13.6   0.0    2.7  2  DUF5426       Family of unknown function (DUF5426)
      0.015   15.6   0.0       0.05   13.9   0.0    2.0  1  SMC_hinge     SMC proteins Flexible Hinge Domain
       0.68   10.4   0.0       0.68   10.4   0.0    5.3  3  ABC_tran      ABC transporter
       0.69   10.3   3.4        6.4    7.1   0.0    3.7  3  AAA_16        AAA ATPase domain
        5.4    7.0   5.7         48    3.9   0.2    3.5  3  ApoO          Apolipoprotein O


Domain annotation for each model (and alignments):
>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.3   0.0   6.7e-29   1.2e-25       2     198 ..      97    1108 ..      96    1126 .. 0.96

  Alignments for each domain:
  == domain 1  score: 90.3 bits;  conditional E-value: 6.7e-29
                  EEEEEEESETTEECEEEEEETTSSEEEEEESTTSSHHHHHHHHHHHCTT.TTTTTTCHCCCCCC--BTTCSSTTEEEEEEEEEETTEE...SSSSSS CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxx RF
       SMC_N    2 lkrleienFksyagktvilpfsksftaivGpNGSGKsnlldAilFvLGersakklrseklsdlihkskekasvkkaeveitfdnedkk...lkieke 95  
                  ++ + + nF     ++  + f +++++++G+NGSGKs +l  +  +LG +++++ r+ ++++li++       ++a++ +t++n + +     +  +
  EPX71947.1   97 IECIHLINFMCH--DSLRISFGSRINFVIGHNGSGKSAILTGLTVCLGAKASSTNRAPNMKSLIKQ-----GKSFARILVTISNRGFEayqRDVYGD 186 
                  566777788777..79999**********************************************9.....55677777777777766433457778 PP

                  CEEEEEEEETTSEEEEEE...TTEE.E-H.HHHHHHHHCTT-STT.................................................... CS
                  xxxxxxxxxxxxxxxxxx...xxxx.xxx.xxxxxxxxxxxxxxx.................................................... RF
       SMC_N   96 evsisrrvkrkgeseyki...ngke.vtk.kevsellesagiske.................................................... 135 
                  +++i+r++ r+g++eyk+   +++   tk +e+ ++  ++g++++                                                    
  EPX71947.1  187 SITIERTIRREGSTEYKLrsqDDTViSTKrEELDSICDHMGLQIDnpmniltqdtarqflgnsspkekyqlfmkgiqlkqlednyslieqslyqtkn 283 
                  9*****************5542222223348999999999***99**************************************************** PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX71947.1  284 aldgkksgllqlakkeedcktkwdqsretenlhnilekkkeemawalvvevekellgteeevrvaetrvnqcheernsyikkfgefderivlknqam 380 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX71947.1  381 eilkasitetkarfenviktfeahrsevndvdiqkrdiqnsinaaknclqiykdqlasererqnnddvsdhqrrldeistlqrqianlseqaveles 477 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX71947.1  478 krnelhttvlekegnlssfldkkdtlakqvtnqaekirvmeevqkdkltafgknipyllrlitretrfqhppkgpmgqymtvkeekwhltierilgn 574 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX71947.1  575 vingfivrthqdqlvlkelmrrancnatvvvgrydpfdyssgepvtpystvlqaihfeddevlhtlinhlgiekmlliedrkeaeaymkrgvinvtq 671 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX71947.1  672 cyaldprskgfgfrivsnqrssgiskvtpwnrppriggsssmdarleknqlenlkqlydnanndllaakqelgrhkreeqiviekieaikreildtr 768 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX71947.1  769 rqvnalesvetsvldtekiqslerkisetekelesyvgqlqdakdeerrireeqlpvideiemfkekiqgenqklaiqqaeidqirdektrlemaqe 865 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX71947.1  866 eyinksehllnemrekeakrircsqvvaeytakaatrcervpvthtpveldneierlqlqitewrnrtgisveqaaedylkakeehdrskflvsklq 962 
                  ************************************************************************************************* PP

                  ................................................................................CS-HHHHHHHHHHHHHH CS
                  ................................................................................xxxxxxxxxxxxxxxxx RF
       SMC_N  136 ................................................................................lLSgGektLvalaLlfA 152 
                                                                                                   LSgGek+ + + +l++
  EPX71947.1  963 llletleetlrkrnemwakfrklitlrtkelfelylsqrnftgklvirhqdefleprvypanrnlsvsrdrqtlsqvsvqGLSGGEKSFATICMLLS 1059
                  ************************************************************************************************* PP

                  HHCCS--SEEEECTTTTTS-HHHHHHHHHHHH...HHCTTSEEEEE-SS CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxx RF
       SMC_N  153 iqkvkpaplyllDeidaaLDeknvkkvaellk...eksknaQfivislr 198 
                  i ++   pl +lDe+d  +D+ n+    +++    ++s++ Qfi i+ +
  EPX71947.1 1060 IWEAMSCPLRCLDEFDVFMDAVNRLVSIRMMVdsaKDSSEKQFIFITPQ 1108
                  **********************9987666665243455679***99965 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   2.4      0.91   1.6e+03      46     107 ..      15      75 ..       3      94 .. 0.40
   2 !   55.6   5.5   5.6e-18     1e-14       2     183 ..     100     323 ..      99     338 .. 0.49
   3 ?   -5.6  17.4        10   1.8e+04     106     198 ..     368     471 ..     328     525 .. 0.53
   4 ?  -28.4  44.0        10   1.8e+04      79     192 ..     757     878 ..     684     991 .. 0.62

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.91
      AAA_23  46 etprlsrksgrgfeksdveiesegkvkayveltfenkdgrytrsiererelskkkgkttkka 107
                 e +++  ++ +g  +s++e ++ +k+ +  ++++e ++  +tr ++r+ +++ + ++t + +
  EPX71947.1  15 EIETEFEGNTQGTRRSSPESFN-AKDTKRRRVEYEQDSSLKTRAVQRSVSTNLSRNNTADST 75 
                 3333333334444444444332.233333444444444433333333333333332222222 PP

  == domain 2  score: 55.6 bits;  conditional E-value: 5.6e-18
      AAA_23   2 LkienfrsfrdqeidFskgltlItGpNGaGKTTildAiklaLygetprlsrks........grgfeksdveiese......gkvkayveltfenkdgry 86 
                 +++ nf++++   i F++ ++ ++G+NG+GK++il  ++ +L+ +++ ++r          g++f +  v+i+++      +      ++      g  
  EPX71947.1 100 IHLINFMCHDSLRISFGSRINFVIGHNGSGKSAILTGLTVCLGAKASSTNRAPnmkslikqGKSFARILVTISNRgfeayqR------DVY-----G-- 185
                 89******************************************99888887777777776666666666666663333221......222.....2.. PP

      AAA_23  87 trsiererelskkkgkttkkaklelleideleqfise...llgskkiilnlilflgqerfeefelkdkke............................. 153
                  +si+ er+ +++ + ++k    + + i+++++++++   ++g  +i +++ ++ ++   + + ++++ke                             
  EPX71947.1 186 -DSITIERTIRREGSTEYKLRSQDDTVISTKREELDSicdHMGL-QIDNPMNILTQDTARQFLGNSSPKEkyqlfmkgiqlkqlednyslieqslyqtk 282
                 .3444455544444444444444444444444444442222222.222222222222222222222222211122222211111111111112222222 PP

      AAA_23 154 ...........rleelekeleeledekkllekleqekekek 183
                            +l++ e++ +++ d+ ++ e+l++++ek+k
  EPX71947.1 283 naldgkksgllQLAKKEEDCKTKWDQSRETENLHNILEKKK 323
                 22223222333333333333333333333333333333333 PP

  == domain 3  score: -5.6 bits;  conditional E-value: 10
      AAA_23 106 kaklelleideleqfisellgskkiil.nlilflgqerfeefel....kdkkerleelekeleeledekkllekl......eqekekekeleeleeele 193
                 + +++++ +++  ++++ +++ +k+++ n+i  + + r e ++      d ++ +++++++l+  +d+    +++       + + + +e+++l++++ 
  EPX71947.1 368 EFDERIVLKNQAMEILKASITETKARFeNVIKTFEAHRSEVNDVdiqkRDIQNSINAAKNCLQIYKDQLASERERqnnddvSDHQRRLDEISTLQRQIA 466
                 224444444555566666666666666555556666664222222222333334444444444433322222222233333222223336666666665 PP

      AAA_23 194 eilke 198
                 ++ ++
  EPX71947.1 467 NLSEQ 471
                 55443 PP

  == domain 4  score: -28.4 bits;  conditional E-value: 10
      AAA_23  79 fenkdgrytrsiererelskkkgktt.....kkaklelleideleqfisellgskkiilnlilflgqer......feefelkdkke..rleelekelee 164
                 +e +++   ++++ +r+++  ++++t      k +  + +i+e+e+++++++g+ ++  +    + +e+       e+f++k + e  +l+  + e+++
  EPX71947.1 757 IEAIKR---EILDTRRQVNALESVETsvldtEKIQSLERKISETEKELESYVGQLQDAKDEERRIREEQlpvideIEMFKEKIQGEnqKLAIQQAEIDQ 852
                 222222...222222222222222221110022222222224444444444443333222222223333444433333333222223366666666666 PP

      AAA_23 165 ledekkllekleqekekekeleeleeel 192
                 + dek  le  +  +e+ ++ e l +e+
  EPX71947.1 853 IRDEKTRLEMAQ--EEYINKSEHLLNEM 878
                 666666555442..33444444444444 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.3   8.9e-06     0.016       1      47 [.     119     175 ..     119     230 .. 0.63
   2 !    8.2   0.1    0.0011       1.9     182     296 ..    1001    1106 ..     913    1109 .. 0.58

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 8.9e-06
      AAA_21   1 lnvliGpNgsGKSnLLdaldllarl..........drdvegltdelsggggirkips 47 
                 +n++iG NgsGKS +L  l +  ++          +++++  + ++ ++  +++ ++
  EPX71947.1 119 INFVIGHNGSGKSAILTGLTVCLGAkasstnrapnMKSLIKQGKSFARILVTISNRG 175
                 79*****************99988777776555554444444444444444444444 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.0011
      AAA_21  182 krllqrlvrslklveielsdlgegeeliasvderlrergvvflengdgqelparelSdGtkrll..alltallralkkgsllliDEpEngLHPkllr 276 
                  ++++++lv + ++ ++e++   +  +l+            v  ++    ++++  lS G k+++  ++l+++++a +  +l ++DE++ +++   + 
  EPX71947.1 1001 RNFTGKLVIRHQDEFLEPRVYPANRNLS------------VSRDRQTLSQVSVQGLSGGEKSFAtiCMLLSIWEAMSC-PLRCLDEFDVFMDA--VN 1082
                  3333333333333333333333333333............3333334447888888*******999**********99.*************9..55 PP

      AAA_21  277 rll..ell....kelsrngaQviltT 296 
                  rl+  +++    k+ s+   Q+i+ T
  EPX71947.1 1083 RLVsiRMMvdsaKDSSE--KQFIFIT 1106
                  55555666665555555..9999988 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5  25.5   1.8e-07   0.00032       3     271 ..      97     514 ..      96     534 .. 0.55
   2 ?   -7.0  18.1        10   1.8e+04     143     275 ..     724     857 ..     707     896 .. 0.56

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 1.8e-07
      AAA_15   3 IkkikikNFRslkdveidlseeltvliGkNnsGKSsilealdlFlnnkekkn.................kkvikiekedleifeniseskdikIdvef. 83 
                 I+ i++ NF ++++  i++ + ++++iG+N+sGKS il  l + l  k +                      ++i +  +e ++ +    +i I+ +  
  EPX71947.1  97 IECIHLINFMCHDSLRISFGSRINFVIGHNGSGKSAILTGLTVCLGAKASSTnrapnmkslikqgksfaRILVTISNRGFEAYQRDVYGDSITIERTIr 195
                 6779999***************************************99444469999999999999999555555566666665666666666666656 PP

      AAA_15  84 ................................................................................................... 83 
                                                                                                                    
  EPX71947.1 196 regsteyklrsqddtvistkreeldsicdhmglqidnpmniltqdtarqflgnsspkekyqlfmkgiqlkqlednyslieqslyqtknaldgkksgllq 294
                 666665555555555555555555555555555556666666666666666666666666666666666666666666666666666666666666666 PP

      AAA_15  84 ...............................................aekekakeyektlkskekkkadlllkkkesdlkktikdkklklkknelsdek 135
                                                                +     +e ++ ++ ++ +++  + +  ++++ ++ +   + lk++     k
  EPX71947.1 295 lakkeedcktkwdqsretenlhnilekkkeemawalvvevekellgtE-----EE-VRVAE-TRVNQCHEERNSYIKKFGEFDE--RIVLKNQAMEILK 384
                 666666666666666555555555555555555555555432222221.....11.11111.1111111122222222222222..2233333333444 PP

      AAA_15 136 isvekkkskkelpkekeeklekekeelkidkedlkklikkleeslkkeeelknvlksaiiklllisakRnvsdedsekks.....sllgklkekileea 229
                  s+ + k++ e  +++ e + +e ++++i+k d+++ i+  +++l+ ++           + l  + +R+++d+ s++++     s+l +++ +++e+ 
  EPX71947.1 385 ASITETKARFENVIKTFEAHRSEVNDVDIQKRDIQNSINAAKNCLQIYK-----------DQLASERERQNNDDVSDHQRrldeiSTLQRQIANLSEQ- 471
                 4444445555555555566666666666777777777776666666666...........44444455555555555444110003344444444443. PP

      AAA_15 230 lqekleeelteklkeiqeklkeidkklaeelk......kilkkkidki 271
                        el++k +e+++ + e++++l++ l       k +++  +ki
  EPX71947.1 472 -----AVELESKRNELHTTVLEKEGNLSSFLDkkdtlaKQVTNQAEKI 514
                 .....3344445555555555555555444444433333333333333 PP

  == domain 2  score: -7.0 bits;  conditional E-value: 10
      AAA_15 143 skkelpkekeeklekekeelkidkedlkklikkleeslkkee.......elknvlksaiiklllisakRnvsdedsekkssllgklkekileealqekl 234
                 + k+l+++ +++l   k+el   k + + +i+k+e ++ +          l++v  s +++ ++ s +R++s++++e  +s+ g+l++ + ee      
  EPX71947.1 724 NLKQLYDNANNDLLAAKQELGRHKREEQIVIEKIEAIKREILdtrrqvnALESVETSVLDTEKIQSLERKISETEKEL-ESYVGQLQDAKDEE------ 815
                 233344444444444444444444444444443333332222344444455578888889999999999999888888.88888888888774...... PP

      AAA_15 235 eeelteklkeiqeklkeidkklaeelk..kilkkkidkikkfn 275
                   +++e+   + ++++ +++k++ e +   i +  id+i +++
  EPX71947.1 816 -RRIREEQLPVIDEIEMFKEKIQGENQklAIQQAEIDQIRDEK 857
                 .455555555566666666666655554444444445444333 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   3.5e-07   0.00063       4      59 ..     100     153 ..      97     155 .. 0.77

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 3.5e-07
      AAA_29   4 lqlvNWgtfdghtieidlkgatlltGpsGsGKSTllDAiqalLvpakkvrfNkaan 59 
                 ++l+N    d  +i++  + + +++G++GsGKS++l  +++ L ++   + N a n
  EPX71947.1 100 IHLINFMCHDSLRISFGSR-INFVIGHNGSGKSAILTGLTVCLGAKA-SSTNRAPN 153
                 6777877777777888744.89**************88777766665.88888865 PP

>> DUF5426  Family of unknown function (DUF5426)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.5       4.2   7.6e+03      72     118 ..     375     421 ..     369     453 .. 0.60
   2 ?   13.6   0.0   3.5e-05     0.062      45     122 ..    1051    1126 ..    1048    1129 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 4.2
     DUF5426  72 ietqvnellgllleresikeekeperifetvkleavvvlekeevlns 118
                 +++q  e+l   + +++ + e++ ++++    +   v ++k ++ ns
  EPX71947.1 375 LKNQAMEILKASITETKARFENVIKTFEAHRSEVNDVDIQKRDIQNS 421
                 55566666666666666666664333333333333466666555554 PP

  == domain 2  score: 13.6 bits;  conditional E-value: 3.5e-05
     DUF5426   45 ytallllvklfqkienafqklanivffietqvnellgllleresikeekeperifetvkleavvvlekeevlnsKLsD 122 
                  + ++ +l+ ++  ++     l ++ +f++  vn l+++++   s k+ +e++ if t++ + +++ +++ v+  +LsD
  EPX71947.1 1051 FATICMLLSIWEAMSCPLRCLDEFDVFMD-AVNRLVSIRMMVDSAKDSSEKQFIFITPQDMGQIAFDDD-VVVFRLSD 1126
                  678999********************997.6************************************99.99999999 PP

>> SMC_hinge  SMC proteins Flexible Hinge Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   2.8e-05      0.05       6     116 ..     551     661 ..     547     662 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 2.8e-05
   SMC_hinge   6 Grladlievd.egyekAveaalgnrlqalvvedeetakkiieflkkknagratflpldrikqknkadgandknsgavplidlvevdde.lrkalryllg 102
                 G+ ++ ++v+ e++   +e +lgn ++ ++v+++++   + e ++++   +at+++  r +++  ++g+      +  +++ ++++d  + + l + lg
  EPX71947.1 551 GPMGQYMTVKeEKWHLTIERILGNVINGFIVRTHQDQLVLKELMRRA-NCNATVVVG-RYDPFDYSSGEPVT--PYSTVLQAIHFEDDeVLHTLINHLG 645
                 78899999**9***************************999999999.8*****999.67777666666554..7999999999988875555544443 PP

   SMC_hinge 103 ..dtlvvdsldeAeel 116
                   + l+ ++ +eAe++
  EPX71947.1 646 ieKMLLIEDRKEAEAY 661
                 3388888888888765 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00038      0.68       6      32 ..     111     138 ..     108     243 .. 0.80
   2 ?   -6.3   7.5        10   1.8e+04      25      25 ..     459     459 ..     329     547 .. 0.59
   3 ?   -2.5   7.7       3.7   6.6e+03      79     123 ..     991    1058 ..     722    1073 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00038
                 EEEETTSEE.EEEESTTSSHHHHHHHHT CS
                 xxxxxxxxx.xxxxxxxxxxxxxxxxxx RF
    ABC_tran   6 lklkegekv.aivGenGaGKStLlklla 32 
                 l ++ g+++  ++G+nG+GKS +l  l+
  EPX71947.1 111 LRISFGSRInFVIGHNGSGKSAILTGLT 138
                 5566666651468*********998765 PP

  == domain 2  score: -6.3 bits;  conditional E-value: 10
                 H CS
                 x RF
    ABC_tran  25 S 25 
                 S
  EPX71947.1 459 S 459
                 1 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 3.7
                  H.....................HHHTC.....HHHHHHHSTTGGTTCBGESTTSGGS-HHHHHHHHHHHHH CS
                  x.....................xxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   79 n.....................esdee.....iekalsklglkelkdtvvksspssLSgGqkqrvalaral 123 
                  +                     +   e     ++ a ++l+ + +++t  + s + LSgG+k+   ++++l
  EPX71947.1  991 KelfelylsqrnftgklvirhqD---EfleprVYPANRNLSVSRDRQTLSQVSVQGLSGGEKSFATICMLL 1058
                  04444444444444444443220...133344777777888888888888888899999999988888766 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.0    0.0035       6.4      25      43 ..     118     136 ..     101     184 .. 0.86
   2 ?   -2.2   0.1       2.6   4.6e+03      93     107 ..     447     469 ..     403     545 .. 0.57
   3 ?    1.5   0.1       0.2   3.5e+02      40      79 ..     589     632 ..     588     828 .. 0.73

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0035
      AAA_16  25 elvllsGesGvGKsslvre 43 
                 ++ +++G+ G+GKs++++ 
  EPX71947.1 118 RINFVIGHNGSGKSAILTG 136
                 7889************975 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 2.6
      AAA_16  93 eleawrekleeala........a 107
                 ++++++++l+e  +        +
  EPX71947.1 447 DVSDHQRRLDEISTlqrqianlS 469
                 44444444444444433222221 PP

  == domain 3  score: 1.5 bits;  conditional E-value: 0.2
      AAA_16  40 lvrellralekdggiflrgkcdql..esa...ipysalaqalare 79 
                 +++el+r+++ + + ++ g++d +  +s+   +pys+++qa+ +e
  EPX71947.1 589 VLKELMRRANCN-ATVVVGRYDPFdySSGepvTPYSTVLQAIHFE 632
                 567777777766.77888888888543337779999988888653 PP

>> ApoO  Apolipoprotein O
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0      0.03        54      30      73 ..      54      97 ..      25     105 .. 0.89
   2 ?   -2.3   0.2       2.2   3.9e+03      21      58 ..     476     513 ..     458     519 .. 0.77
   3 ?    3.9   0.2     0.027        48      10      40 ..     784     814 ..     767     843 .. 0.79

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.03
        ApoO 30 ytsavqdelnkvkskvetaeqsvtdtiasLkeppedllPrlgyi 73
                +t avq ++++  s+ +ta ++++dt+++  ++++++  r+g+i
  EPX71947.1 54 KTRAVQRSVSTNLSRNNTADSTGEDTVQNAIQSNPQFENRVGVI 97
                68899*************************************99 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 2.2
        ApoO  21 rslRkslepytsavqdelnkvkskvetaeqsvtdtias 58 
                 +s R++l++++ + +  l+++ +k +t+ ++vt++ + 
  EPX71947.1 476 ESKRNELHTTVLEKEGNLSSFLDKKDTLAKQVTNQAEK 513
                 56688888888888888888888888888888887765 PP

  == domain 3  score: 3.9 bits;  conditional E-value: 0.027
        ApoO  10 eeptdrLeegvrslRkslepytsavqdelnk 40 
                 +e+ ++Le++++++ k+le+y+ ++qd+ ++
  EPX71947.1 784 TEKIQSLERKISETEKELESYVGQLQDAKDE 814
                 67899*********************99764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1140 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1985  (0.110714); expected 358.6 (0.02)
Passed bias filter:                      473  (0.0263818); expected 358.6 (0.02)
Passed Vit filter:                        77  (0.00429472); expected 17.9 (0.001)
Passed Fwd filter:                        35  (0.00195214); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 1.31u 0.29s 00:00:01.60 Elapsed: 00:00:00.50
# Mc/sec: 6803.56
//
Query:       EPX71948.1  [L=148]
Description: 60S ribosomal protein L27/L28 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.3e-20   73.6   0.0    3.1e-20   73.1   0.0    1.2  1  Ribosomal_L27A  Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27
  ------ inclusion threshold ------
       0.11   11.4   0.0       0.12   11.3   0.0    1.1  1  Lyase_8_N       Polysaccharide lyase family 8, N terminal alp


Domain annotation for each model (and alignments):
>> Ribosomal_L27A  Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.1   0.0   3.5e-24   3.1e-20       3     127 ..      28     145 ..      26     146 .. 0.85

  Alignments for each domain:
  == domain 1  score: 73.1 bits;  conditional E-value: 3.5e-24
                     GGTSSTTTTTTTTT-..S--........S--.........---GGG..---...EEEEHHHHHHTTTTGTTS--.....----EEEGGGTTTTSS CS
  Ribosomal_L27A   3 ktgGrGhkGqkkrsg..vkk.kpg.feGGqmplyrrlpkrGfknskfkkey...kvvnlkdLdelideerlela.....deaeeidleelaeagl 85 
                     ++gGrG +G +++ +   +k +pg f  G++         G+++ + +++    + vnl++L++l+++e++e+      + a++i++ +      
      EPX71948.1  28 HPGGRGLAGGQHHLRthLDKyHPGyF--GKV---------GMRRFHLQRNPlwrPSVNLDRLWTLVPNETREKYlgkntEVAPVINIVQS----- 106
                     78**********999889999***99..***.........88843433444577***************999444666555788888888..... PP

                     S....SE.EEE--S---.-.-EEEESEE-HHHHHHHHHTT-EEE CS
  Ribosomal_L27A  86 ikkkdgv.Kvlgkgeltkk.lkvkaskfSkkAkekIeaaGGkve 127
                          g+ Kvlgkg+l++  ++v+a+++S++A+ekI++aGG ve
      EPX71948.1 107 -----GYaKVLGKGRLPETpVIVQARYVSRRAEEKIKQAGGVVE 145
                     .....***********9855*********************998 PP

>> Lyase_8_N  Polysaccharide lyase family 8, N terminal alpha-helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   1.3e-05      0.12     248     299 ..      89     143 ..      73     148 .] 0.82

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 1.3e-05
                 TT---HHHHCHHHHHHHHTTGGGEETTEE-GG...GSGGGGGSCCCTCHHHHHHH CS
   Lyase_8_N 248 kwaisdeklqilyklveksylplivkgemmdm...vrGRsiSRaneqnkeagael 299
                 k+  ++++++ ++++v+ +y++++ kg++ ++   v+ R +SR +e++ + +  +
  EPX71948.1  89 KYLGKNTEVAPVINIVQSGYAKVLGKGRLPETpviVQARYVSRRAEEKIKQAGGV 143
                 56667899999******************9866669********99987766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       257  (0.0143343); expected 358.6 (0.02)
Passed bias filter:                      233  (0.0129957); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 955.73
//
Query:       EPX71949.1  [L=193]
Description: RNase MRP [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    9.9e-14   51.4   1.2    1.4e-13   50.9   0.0    1.8  2  Rpr2          RNAse P Rpr2/Rpp21/SNM1 subunit domain
  ------ inclusion threshold ------
       0.73    9.6   3.0        4.4    7.1   0.1    2.3  2  Rubredoxin_2  Rubredoxin metal binding domain


Domain annotation for each model (and alignments):
>> Rpr2  RNAse P Rpr2/Rpp21/SNM1 subunit domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.9   0.0   1.6e-17   1.4e-13       2      90 .]       8     101 ..       7     101 .. 0.90
   2 ?   -1.2   0.2      0.28   2.5e+03      68      70 ..     147     149 ..     112     183 .. 0.64

  Alignments for each domain:
  == domain 1  score: 50.9 bits;  conditional E-value: 1.6e-17
                 HHHHHHHHH.HHHHH-HHHHHHHHHHHHHHHHHCT---SSTCCCTB-TTT--B--CTTTEEEEEE-SSS-E...............EEEEETTTT CS
        Rpr2   2 lnfLyqaahlqlaeaspalsrylakqlrevskkaqlrlppsvkrtvCkkCgsvlipgvtcsvrvenkskkkkkkkkka......dvlvvtClaCg 90 
                 l++L +++   + + sp+ls+++++++ ++ ++  ++l+ps + t C+kCgsv+i g ++svr++++++k++   +k       +   + C+ Cg
  EPX71949.1   8 LQYLLNISVS-TYSVSPSLSSHYLRKFYALIEEWDIQLDPSTSLTGCSKCGSVFILGKNASVRTHSHHRKERLDLPKGqlarmeTEWLIVCNVCG 101
                 79*******9.999**************************************************9988887766666688787755569999996 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.28
                 SSS CS
        Rpr2  68 ksk 70 
                 +s+
  EPX71949.1 147 TSR 149
                 222 PP

>> Rubredoxin_2  Rubredoxin metal binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.3     0.012     1e+02       3       9 ..      53      59 ..      52      61 .. 0.84
   2 ?    7.1   0.1   0.00049       4.4       2      10 ..      96     104 ..      96     109 .. 0.89

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.012
  Rubredoxin_2  3 CsqCGfe 9 
                  Cs+CG++
    EPX71949.1 53 CSKCGSV 59
                  9***986 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.00049
  Rubredoxin_2   2 vCsqCGfes 10 
                   vC+ CG++s
    EPX71949.1  96 VCNVCGYTS 104
                   7******98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1203  (0.067098); expected 358.6 (0.02)
Passed bias filter:                      582  (0.0324614); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 1443.32
//
Query:       EPX71950.1  [L=384]
Description: Sad1 interacting factor 2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.3e-50  169.3   1.0    1.2e-49  168.8   1.0    1.2  1  DUF155    Uncharacterised ACR, YagE family COG1723
  ------ inclusion threshold ------
      0.029   14.5   0.0       0.13   12.5   0.2    2.0  2  GED       Dynamin GTPase effector domain
      0.031   14.2   1.0       0.14   12.2   0.6    2.1  2  SafA      Two-component-system connector protein


Domain annotation for each model (and alignments):
>> DUF155  Uncharacterised ACR, YagE family COG1723
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  168.8   1.0     2e-53   1.2e-49       1     176 []     160     332 ..     160     332 .. 0.95

  Alignments for each domain:
  == domain 1  score: 168.8 bits;  conditional E-value: 2e-53
      DUF155   1 vfiFknGsvVfwgldeeeeknflnkllkflneeselpreeeqeteeleyvydeqsessrikgdvivl.kskslleklaiShalaqSvkLdvlEesldel 98 
                 vf F++G+vV+wg++ eee +fl++l++f  e+    + +  e ee++y+ ++  +++ri +d i l + ++ + +l+iSha+aqSvk++++Ee+++e+
  EPX71950.1 160 VFCFSYGVVVLWGFTIEEEHRFLRELSRFEIEK---LKMDDIEVEEFNYYVTN-LYQPRIFNDFIALrDASNYMIRLSISHAIAQSVKISLFEELVNET 254
                 89***************************7775...566666699****8876.999**********77779*************************** PP

      DUF155  99 lestekipkelakkgklklsrkellkktgellslrinlnlkselldtPdffWeepeleslyeavseyleikeRikiLn 176
                 ++ t+++p+++a++g++kl+r+e++  +g+l+ lrin+nl+ ++ld+P+++W ep+le++y+a ++ylei++R+ +Ln
  EPX71950.1 255 IDATKDTPQMIAESGRIKLKREEIMMAVGQLFILRININLQGSVLDSPELMWTEPQLEPIYTAARSYLEINQRVALLN 332
                 *****************************************************************************9 PP

>> GED  Dynamin GTPase effector domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0         1   6.1e+03      22      50 ..      59      87 ..      56      93 .. 0.82
   2 ?   12.5   0.2   2.1e-05      0.13      27      77 ..     229     280 ..     220     285 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1
                HHHHHHHHHHHHHHHTHHHHCCCCCHHHC CS
         GED 22 ktiadqiPkaimhllvneakeslqkella 50
                k+ +d+ P +  ++ +++++ +l  ++++
  EPX71950.1 59 KRHRDHLPRVTAYCTCDTFRVDLLFKFFQ 87
                56689999999999999998888777766 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 2.1e-05
                 HHHHHHHHHHTHHHHCCCCCHHHCCTTS.GGGHHHHT---SCHCCCCHHHHH CS
         GED  27 qiPkaimhllvneakeslqkellakLyk.kedldeLLkEdeeiaekRkelkk 77 
                 +i + i h + +++k sl +el+++  + ++d  ++++E+ +i+ kR+e+  
  EPX71950.1 229 MIRLSISHAIAQSVKISLFEELVNETIDaTKDTPQMIAESGRIKLKREEIMM 280
                 68899******************986551566****************9865 PP

>> SafA  Two-component-system connector protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.41   2.5e+03      44      64 ..     174     194 ..     171     195 .. 0.86
   2 ?   12.2   0.6   2.3e-05      0.14      17      41 ..     354     378 ..     343     382 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.41
        SafA  44 sisemGriardlthfiinslq 64 
                 +i e  r  r+l+ f i+ l+
  EPX71950.1 174 TIEEEHRFLRELSRFEIEKLK 194
                 6889999********998875 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 2.3e-05
        SafA  17 keimsvivvvllltltliaifsaid 41 
                  e +  ivv+l+  l liaifs + 
  EPX71950.1 354 DESLEWIVVILMALLVLIAIFSILV 378
                 566788****************865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (384 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       867  (0.0483574); expected 358.6 (0.02)
Passed bias filter:                      623  (0.0347482); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2761.25
//
Query:       EPX71951.1  [L=97]
Description: hypothetical protein SOCG_03885 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0015   18.2   0.7     0.0016   18.1   0.7    1.1  1  Filament         Intermediate filament protein
     0.0043   16.3   4.2     0.0054   16.0   4.2    1.0  1  Tho2             Transcription factor/nuclear export subunit 
     0.0097   14.8   2.1      0.011   14.6   2.1    1.0  1  DUF812           Protein of unknown function (DUF812)
  ------ inclusion threshold ------
       0.38   11.2   4.3        1.4    9.4   0.3    2.4  3  Snapin_Pallidin  Snapin/Pallidin
          2    8.5   4.1        1.1    9.4   0.2    2.4  3  Strep_SA_rep     Streptococcal surface antigen repeat


Domain annotation for each model (and alignments):
>> Filament  Intermediate filament protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.7   4.5e-07    0.0016      48     256 ..      10      77 ..       2      95 .. 0.51

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 4.5e-07
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
    Filament  48 lkelyekeleelrkqldeltkerarlqleldnlreeledlrkkyekelnkreevEaelkalrkdldeatlarvdLekkvesLkeelaflkkvheeEvke 146
                  +++y+++++ +rk++ +++++  +  + + +++++++                                                             
  EPX71951.1  10 SENVYQQKIARIRKKVADVENDCVQYAIKIYHVEKDIQ------------------------------------------------------------- 47 
                 44555555555555555555555555555555555555............................................................. PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Filament 147 lqkqvseqvlvevdaarkldLteilkeiraqyeelaeknreeaeewykskleelqeaaeknsealrsakeeitelrrqiqsleieleslkkqkasleaq 245
                                                                                                 + + e + lk++ +   ++
  EPX71951.1  48 --------------------------------------------------------------------------------RYRLETQMLKNTFNEHIEH 66 
                 ................................................................................5555555555544444444 PP

                 HHHHHHHHHHH CS
    Filament 246 laeleerleae 256
                  + l+++   e
  EPX71951.1  67 QKKLKDQDLPE 77 
                 44444444444 PP

>> Tho2  Transcription factor/nuclear export subunit protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   4.2   1.5e-06    0.0054      20      85 ..       7      72 ..       3      78 .. 0.92

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.5e-06
        Tho2 20 iyvpkeqYekeieklkseieelakdrsderaaakkkkkekkrlkeliekLeeEkkeqiehvekvkk 85
                i ++++ Y+++i++++++++++++d  +   ++ + +k+++r++   + L++ ++e+ieh++k k 
  EPX71951.1  7 ITTSENVYQQKIARIRKKVADVENDCVQYAIKIYHVEKDIQRYRLETQMLKNTFNEHIEHQKKLKD 72
                88999*****************88887779999*****************************9875 PP

>> DUF812  Protein of unknown function (DUF812)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   2.1   3.2e-06     0.011     328     397 ..      14      84 ..       3      87 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 3.2e-06
      DUF812 328 reeeleelqeqieeleskieeleeeikklessikqveeeleeekee.neelekevklkkktlellpdaeen 397
                  +++++ +++++ ++e++  +++ +i ++e++i++   e++ +k++ ne  e ++klk + l  +pd +++
  EPX71951.1  14 YQQKIARIRKKVADVENDCVQYAIKIYHVEKDIQRYRLETQMLKNTfNEHIEHQKKLKDQDLPEAPDVQSS 84 
                 478899************************************99983555678899999998888888766 PP

>> Snapin_Pallidin  Snapin/Pallidin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.3   0.00038       1.4      59      78 ..      12      31 ..       2      41 .. 0.85
   2 ?    1.0   0.0      0.16   5.6e+02      57      83 ..      31      57 ..      29      62 .. 0.79
   3 ?    3.0   0.3     0.039   1.4e+02      17      46 ..      55      84 ..      47      96 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00038
  Snapin_Pallidin 59 keyakKLvnikkrmsslner 78
                     + y++K+++i+k++  +++ 
       EPX71951.1 12 NVYQQKIARIRKKVADVEND 31
                     57*************99985 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.16
  Snapin_Pallidin 57 dlkeyakKLvnikkrmsslnerlqklk 83
                     d+ +ya K+  ++k++++    +q lk
       EPX71951.1 31 DCVQYAIKIYHVEKDIQRYRLETQMLK 57
                     677899999999999998777777665 PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.039
  Snapin_Pallidin 17 eldeklkelrqsQeeLleqldrlnekLkel 46
                      l+++++e +++Q++L++q   ++ ++++ 
       EPX71951.1 55 MLKNTFNEHIEHQKKLKDQDLPEAPDVQSS 84
                     578889999999999998855555555555 PP

>> Strep_SA_rep  Streptococcal surface antigen repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.2    0.0003       1.1      10      25 .]      14      29 ..      13      29 .. 0.94
   2 ?   -0.8   0.0      0.46   1.6e+03      11      17 ..      43      49 ..      42      50 .. 0.89
   3 ?   -2.1   0.1       1.2   4.1e+03      18      22 ..      67      71 ..      66      72 .. 0.60

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0003
                  HHHHHHHHHHHHHH-X CS
  Strep_SA_rep 10 YeaeLAaVQKanadye 25
                  Y++ +A+  K++ad e
    EPX71951.1 14 YQQKIARIRKKVADVE 29
                  **************76 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.46
                  HHHHHHH CS
  Strep_SA_rep 11 eaeLAaV 17
                  e+++ ++
    EPX71951.1 43 EKDIQRY 49
                  89**999 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 1.2
                  HHHHH CS
  Strep_SA_rep 18 QKana 22
                  QK++ 
    EPX71951.1 67 QKKLK 71
                  66665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1529  (0.0852808); expected 358.6 (0.02)
Passed bias filter:                      680  (0.0379274); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 684.24
//
Query:       EPX71952.1  [L=548]
Description: DUF1941 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.6e-29  102.8   2.7    3.2e-14   52.2   0.1    2.1  2  Neurochondrin  Neurochondrin
  ------ inclusion threshold ------
      0.081   13.2   0.9       0.69   10.2   0.1    2.9  2  A_thal_3526    Plant protein 1589 of unknown function (A_thal


Domain annotation for each model (and alignments):
>> Neurochondrin  Neurochondrin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.7   0.3   1.1e-17   9.5e-14       4     140 ..      66     183 ..      63     191 .. 0.84
   2 !   52.2   0.1   3.6e-18   3.2e-14     231     406 ..     254     439 ..     222     452 .. 0.81

  Alignments for each domain:
  == domain 1  score: 50.7 bits;  conditional E-value: 1.1e-17
  Neurochondrin   4 peplekclklLrgkknDterfaaLlLvtkvvk.nsdidaknkravfeavgfkFldrLlktksapsdcnervyralavailacFcaeeelashsevv 98 
                    ++ le+c  lL +k+ Dt++f++L ++ k+++ n d + +     +e + +kFldrLl++k+         y +l+v++l +Fc++e + ++s + 
     EPX71952.1  66 SALLENCFALLHAKD-DTSKFVSLTMLAKLLNeNPDFLFA----FWEQMDMKFLDRLLRSKN-------YEYADLGVSVLLAFCSDEKILRSSCMK 149
                    56799**********.*************99624455543....5699************97.......579************************ PP

  Neurochondrin  99 erIPtllevllkasdedntemvddayecLkavaatprGakal 140
                    +rIP ll++  +  d        ++  ++ a+a+ pr ak l
     EPX71952.1 150 KRIPALLTCTMRHYD--------LCIPTICALASNPRSAKSL 183
                    *********888777........6777777777777766666 PP

  == domain 2  score: 52.2 bits;  conditional E-value: 3.6e-18
  Neurochondrin 231 qewlesLnkgvanilksklspsqrdpalkLaaallevlgsqwlftdekgkkflllllelalvevrltlee.....kkseevekkeevltacfslie 321
                    +e   +L+ +++ +l+  ++++  + a     ++l++lg++ ++ d+k  + +ll++     e+r  l+       + ++ e  +  +  c+ ++ 
     EPX71952.1 254 DELCSYLRPFIKPVLEEFVTEESIENACVQLFSILKALGPDVVMEDNK--ESFLLVIGRCTAEIRANLDLlvstlDEKQKHESLSYSVCTCYEVLG 347
                    5667899999999999999999988888888899********999977..77889**************976554444445555556789****** PP

  Neurochondrin 322 hiieyllr.eeqslld..eaqklklvtilkeafgavleyLrdvkeekikdsv.....fvlAsvrvlgawLaeetsalrkevseLldfllkvar 406
                      i++l + +++++    ++++ +l + l+e fg ++e++rd+ ++  +         v  ++  l  wL e++s+ + ++s+L d ++ + +
     EPX71952.1 348 ILIHFLCEnCDELSQTiePTKFFQLQNTLSELFGDTMEFIRDAWDNMRHHEMfavhvTVVSAIATLCLWLTEDDSQYK-QASGLIDVFMALWK 439
                    ******997555443244*************************9854444445666799****************987.57999999988765 PP

>> A_thal_3526  Plant protein 1589 of unknown function (A_thal_3526)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.1   7.7e-05      0.69      16      48 ..      70     102 ..      69     106 .. 0.91
   2 ?   -0.7   0.1       0.2   1.8e+03      34      46 ..     476     488 ..     460     489 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 7.7e-05
  A_thal_3526  16 eevvraLeeqanIepeftslVWkkLekeNpeFF 48 
                  e ++  L+ +++ ++ ++ +++ kL  eNp+F 
   EPX71952.1  70 ENCFALLHAKDDTSKFVSLTMLAKLLNENPDFL 102
                  689999**************************5 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.2
  A_thal_3526  34 slVWkkLekeNpe 46 
                  ++VW+  ++ N+e
   EPX71952.1 476 EIVWDDFKRCNKE 488
                  6899999999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (548 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       742  (0.0413855); expected 358.6 (0.02)
Passed bias filter:                      463  (0.0258241); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.29s 00:00:00.88 Elapsed: 00:00:00.46
# Mc/sec: 3586.94
//
Query:       EPX71953.1  [L=176]
Description: peptidyl-prolyl cis-trans isomerase Pin1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-22   79.9   0.0    2.7e-22   79.6   0.0    1.2  1  Rotamase    PPIC-type PPIASE domain
    1.8e-18   67.2   0.0    2.2e-18   66.9   0.0    1.2  1  Rotamase_3  PPIC-type PPIASE domain
    1.3e-08   34.7   1.3    2.9e-08   33.6   0.1    2.2  2  WW          WW domain
      1e-06   29.6   0.0    1.4e-06   29.1   0.0    1.3  1  Rotamase_2  PPIC-type PPIASE domain


Domain annotation for each model (and alignments):
>> Rotamase  PPIC-type PPIASE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.6   0.0   5.9e-26   2.7e-22       1      96 [.      72     175 ..      72     176 .] 0.98

  Alignments for each domain:
  == domain 1  score: 79.6 bits;  conditional E-value: 5.9e-26
                 EEEESSCCS.........E----HHHHHHHHHHHHCCTCCCHHHHHHHHCCC-.-CHHHCCTTEEECEETTTS-CCCHHHHCCS-CT-B-S-EEETTEE CS
    Rotamase   1 HILlkvkek.........asekeraeakakaeeileqlksgedtFeelArkySddknsakngGdlgwvekgqlppefekaafslkkGeisepvetkfGf 90 
                 H+L+k+ e+          ++++++ea +++   l+ +k+g  + ++lA k S d++sa++gGdlg++ ++++++ fe+aaf+l++G++s +vet+ Gf
  EPX71953.1  72 HLLVKHRESrrpsswreeHITRSKEEAWDRIHYFLNLIKEGTININDLAAKES-DCSSARRGGDLGFFGRNEMQKPFEDAAFALQPGQLSPVVETNSGF 169
                 9999999999999999999**********************************.********************************************* PP

                 EEEEEE CS
    Rotamase  91 hiikle 96 
                 hii+++
  EPX71953.1 170 HIIQRT 175
                 ***987 PP

>> Rotamase_3  PPIC-type PPIASE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.9   0.0   4.9e-22   2.2e-18      14     112 ..      65     174 ..      47     176 .] 0.91

  Alignments for each domain:
  == domain 1  score: 66.9 bits;  conditional E-value: 4.9e-22
  Rotamase_3  14 d.svkvshIlistkg..........kesrseeeakakadsllaalkega.dFaalAkeySdDpaskenGGelgwftkgqmvkeFedavfslkkgeiskv 100
                   +v+vsh+l++  +          + +rs+eea  ++   l+ +keg+ + ++lA++ Sd  +s+ +GG+lg+f +++m+k+Feda+f+l+ g++s v
  EPX71953.1  65 SpKVRVSHLLVKHREsrrpsswreeHITRSKEEAWDRIHYFLNLIKEGTiNINDLAAKESD-CSSARRGGDLGFFGRNEMQKPFEDAAFALQPGQLSPV 162
                 4489********9999******998889******************776599******998.778********************************** PP

  Rotamase_3 101 vktdfGyHiikv 112
                 v+t+ G+Hii+ 
  EPX71953.1 163 VETNSGFHIIQR 174
                 **********85 PP

>> WW  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.6   0.1   6.5e-12   2.9e-08       1      31 []       6      36 ..       6      36 .. 0.98
   2 ?   -0.7   0.2      0.34   1.5e+03       2      12 ..      83      94 ..      82     105 .. 0.71

  Alignments for each domain:
  == domain 1  score: 33.6 bits;  conditional E-value: 6.5e-12
                X-TTEEEEE-TTTT-EEEEETTT--EESS-- CS
          WW  1 LPpGWeeqwdpdsGrvYYyNheTgetqWekP 31
                LP++W+   +++ +r+Y++N++T+e+ We P
  EPX71953.1  6 LPEPWILKISRSRNRPYFFNPQTQESLWEAP 36
                8****************************98 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.34
                -TTE.EEEE-TT CS
          WW  2 PpGW.eeqwdpd 12
                P+ W ee+ +++
  EPX71953.1 83 PSSWrEEHITRS 94
                677766666654 PP

>> Rotamase_2  PPIC-type PPIASE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1   0.0   3.2e-10   1.4e-06      50     106 ..     115     175 ..      83     176 .] 0.74

  Alignments for each domain:
  == domain 1  score: 29.1 bits;  conditional E-value: 3.2e-10
  Rotamase_2  50 dfaalakgnskk.....aadlgifesasnlpeelakaafalkpgevsgpvetdngyyivkvt 106
                 + ++la ++s++      +dlg+f  ++ + +++++aafal+pg++s++vet+ g++i++ t
  EPX71953.1 115 NINDLAAKESDCssarrGGDLGFFGRNE-MQKPFEDAAFALQPGQLSPVVETNSGFHIIQRT 175
                 4445555555553333345555776666.999**************************9866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       289  (0.0161191); expected 358.6 (0.02)
Passed bias filter:                      253  (0.0141112); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.31s 00:00:00.85 Elapsed: 00:00:00.52
# Mc/sec: 1016.31
//
Query:       EPX71954.1  [L=250]
Description: hypothetical protein SOCG_03888 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.086   13.9   0.8       0.18   12.8   0.8    1.5  1  DUF4927   Domain of unknown function (DUF4927)


Domain annotation for each model (and alignments):
>> DUF4927  Domain of unknown function (DUF4927)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.8     1e-05      0.18       5      36 ..     149     183 ..     145     198 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1e-05
     DUF4927   5 lSpKkkkenALLrYLLdkdds...kdsllkdikPK 36 
                 +SpK+kke+ LL Y+ +kd +   k+sl++d+ P+
  EPX71954.1 149 VSPKRKKEEELLNYISEKDLQnklKQSLSPDMLPR 183
                 7****************986511144555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       786  (0.0438396); expected 358.6 (0.02)
Passed bias filter:                      473  (0.0263818); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.32s 00:00:00.88 Elapsed: 00:00:00.51
# Mc/sec: 1467.23
//
Query:       EPX71955.1  [L=192]
Description: RNase P and RNase MRP subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.1e-19   69.2   0.1    4.9e-19   68.9   0.1    1.0  1  RNase_P_pop3  RNase P subunit Pop3


Domain annotation for each model (and alignments):
>> RNase_P_pop3  RNase P subunit Pop3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.9   0.1   2.7e-23   4.9e-19       1     158 []       3     163 ..       2     163 .. 0.84

  Alignments for each domain:
  == domain 1  score: 68.9 bits;  conditional E-value: 2.7e-23
  RNase_P_pop3   1 KrkqvvkpvLenPytneaklWPivtdqklvleLlqekvlkklvrlle.s.keneeseltvglneivelLe..csesddv....vllvcnkDtPsvLl 89 
                   K++  vk+vLenP+      W  ++        ++ek+ + l++ l+ + ++ +  +lt+glne++ lLe  c+  d+     v++v++ D  s+L 
    EPX71955.1   3 KQQTKVKLVLENPLNVP---WVNIDSS------TKEKLTQVLIQSLPtAkEDYTRHGLTIGLNEVNILLEscCQHTDKDslprVVFVLH-DPQSLLA 89 
                   556679********999...9999999......666666666666664324778899**************755544435687666654.4369999 PP

  RNase_P_pop3  90 sqlpllvavanlt......vklvqlpksaqakldeklGlskagmllvrkdasldkklaklvskkveelqipwLee 158
                    + p+l+a+an++      + lv l+ +aq  +  klGls+a +++vr+d++l  ++  l++  +  +++ wL+e
    EPX71955.1  90 IHYPQLIANANFYskdsgeCLLVCLGAEAQVGISRKLGLSRASAIAVRNDSPLLSQINPLLNG-LPAPSASWLSE 163
                   ******************************************************999999988.9999****985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       354  (0.0197445); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.34s 00:00:00.93 Elapsed: 00:00:00.56
# Mc/sec: 1035.41
//
Query:       EPX71956.1  [L=423]
Description: tRNA pseudouridine synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.5e-15   57.6   0.0    2.2e-10   40.9   0.0    2.4  2  PseudoU_synth_1  tRNA pseudouridine synthase


Domain annotation for each model (and alignments):
>> PseudoU_synth_1  tRNA pseudouridine synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   2.2e-06     0.039       5      70 ..      60     127 ..      56     167 .. 0.70
   2 !   40.9   0.0   1.2e-14   2.2e-10       1     107 [.     237     347 ..     237     348 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 2.2e-06
  PseudoU_synth_1   5 lvGthdfgsfckqkqekkntvrtileaaieevsgeekell......vvtvkgsgFldhqVRamvgvl.favgq 70 
                      + Gt + g +  q +++++t+++ + +a++++   + + l      +v+v++++++d++V+a+ +vl ++   
       EPX71956.1  60 YRGTGYAG-L--QYNNATKTIQEEIFRAFCKIGAIS-H-LnadnprKVHVRSAARTDKGVHAVLNVLgLKLLD 127
                      66777777.4..556667788888888888776663.2.2468889********************9666544 PP

  == domain 2  score: 40.9 bits;  conditional E-value: 1.2e-14
  PseudoU_synth_1   1 AakelvGthdfgsfckqkqek.kntvrtileaaiee..vsgeekellvvtvkgsgFldhqVRamvgvlfavgqgklspedvkellnakk..rkk 89 
                      A+  + Gth f +f+  k+ + ++  r +l++ i+   +++++ ++l++ ++g++F++hq+R mv++l+  ++ + +  + ++++ a+   +++
       EPX71956.1 237 ACSLFQGTHSFHNFTTEKPFGdPSARRYMLRIFIDSihYDKYNRQWLKLVFHGQSFMKHQIRKMVAILIYLTR-SYPFANPSQIIPATIqnPAR 329
                      8999**********999999986667777776666411678889999*********************88877.44444444444333223777 PP

  PseudoU_synth_1  90 iavetapavglvlfhvrY 107
                      +++++ap++ l l + ++
       EPX71956.1 330 LHIPKAPPETLLLKEPIF 347
                      999***999998877655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (423 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       672  (0.0374812); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.35s 00:00:01.01 Elapsed: 00:00:00.55
# Mc/sec: 2306.99
//
Query:       EPX71957.1  [L=550]
Description: RNA-binding protein Scw1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-14   53.8   0.0    2.7e-12   46.3   0.0    2.4  2  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.1   0.0    0.0011        20       3      57 ..     117     171 ..     115     181 .. 0.90
   2 !   46.3   0.0   1.5e-16   2.7e-12       1      64 [.     420     480 ..     420     483 .. 0.91

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0011
                 EESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHH CS
       RRM_1   3 VgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAle 57 
                 +++Lp+++t +e +  F     ++s ++v+ + ++   ++   F s+++A +A +
  EPX71957.1 117 IEDLPRNLTPREFSSTFLFASHVVSSEIVSPAPDNGPAYGLTVFSSRDAALSARD 171
                 899***************************9999999999999999999999876 PP

  == domain 2  score: 46.3 bits;  conditional E-value: 1.5e-16
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkkl 64 
                 ++VgnLpp+++e+eLk+lFs   ++k++   +   + + +++fVeFe+   A +Al++l+g  l
  EPX71957.1 420 IYVGNLPPSTSEDELKALFSTQPGYKRLCFRT---KGNGPMCFVEFENIPCAMEALKTLQGVCL 480
                 8************************6666655...6************************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (550 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       198  (0.0110436); expected 358.6 (0.02)
Passed bias filter:                      142  (0.00792013); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 3807.03
//
Query:       EPX71958.1  [L=338]
Description: Shk1 kinase binding protein 15 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-15   57.7   1.8      0.027   15.4   0.0    5.8  6  WD40           WD domain, G-beta repeat
    9.7e-08   32.2   0.1      0.019   15.2   0.1    4.2  3  ANAPC4_WD40    Anaphase-promoting complex subunit 4 WD40 doma
    5.2e-05   23.2   0.0     0.0014   18.6   0.0    2.6  2  BBS2_Mid       Ciliary BBSome complex subunit 2, middle regio
    0.00099   18.0   0.3       0.53    9.0   0.1    2.9  3  Nucleoporin_N  Nup133 N terminal like
     0.0043   16.9   0.1      0.016   15.1   0.1    2.0  1  PQQ            PQQ enzyme repeat
     0.0044   16.1   0.0     0.0066   15.5   0.0    1.3  1  Coatomer_WDAD  Coatomer WD associated region
  ------ inclusion threshold ------
       0.11   11.4   0.5        3.5    6.5   0.1    3.0  3  Ge1_WD40       WD40 region of Ge1, enhancer of mRNA-decapping


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   0.0   0.00024      0.61       2      38 .]      26      61 ..      25      61 .. 0.83
   2 ?    3.9   0.0     0.043   1.1e+02      21      38 .]      88     105 ..      74     105 .. 0.76
   3 !   15.0   0.3   1.4e-05     0.035       3      38 .]     111     148 ..     109     148 .. 0.82
   4 !    6.2   0.0    0.0079        20      13      38 .]     202     225 ..     190     225 .. 0.66
   5 !   15.4   0.0     1e-05     0.027       3      38 .]     231     265 ..     229     265 .. 0.78
   6 ?   -2.7   0.0       5.2   1.3e+04       9      16 ..     279     285 ..     270     291 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00024
                EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38
                ++l+ +++H s  t+l    +g  las s D t++i+d
  EPX71958.1 26 KPLWLFEAHeSALTAL--ATNGLQLASTSSDETIKIYD 61
                6788899**8889999..778888997666*******8 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.043
                 TSSEEEEEETTSEEEEEE CS
        WD40  21 dgawlasGsdDgtvriWd 38 
                  ++ l++++d+g + +W+
  EPX71958.1  88 TKKHLLACHDNGQITMWS 105
                 4555778*********95 PP

  == domain 3  score: 15.0 bits;  conditional E-value: 1.4e-05
                 EEEEEESS..SSEEEEEEETTSSEEE.EEETTSEEEEEE CS
        WD40   3 clrtltGH..ssvtslafspdgawla.sGsdDgtvriWd 38 
                 +++tl+    ++++++ ++p+ ++ +  G+ D ++r+Wd
  EPX71958.1 111 LVHTLKSSsnKGISGITVHPSEKLAFsVGG-DSKLRLWD 148
                 578998775466************752578.*******9 PP

  == domain 4  score: 6.2 bits;  conditional E-value: 0.0079
                 EEEEEEETTSSE....EEEEETTSEEEEEE CS
        WD40  13 vtslafspdgaw....lasGsdDgtvriWd 38 
                  ++l+      +    l+ G+d+g+++++d
  EPX71958.1 202 LNCLC------LflsnLIVGCDNGSIKVFD 225
                 56663......22222445999******98 PP

  == domain 5  score: 15.4 bits;  conditional E-value: 1e-05
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++ ++ +H + v ++  s     l+s+s Dg+v++Wd
  EPX71958.1 231 LINEFAAHeKRVKAI--SATTENLVSASSDGSVHVWD 265
                 677889998889999..666666777766*******9 PP

  == domain 6  score: -2.7 bits;  conditional E-value: 5.2
                 SSSSEEEE CS
        WD40   9 GHssvtsl 16 
                 G   +t++
  EPX71958.1 279 GN-RITCI 285
                 33.69998 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0     0.085   2.2e+02      48      69 ..      43      64 ..      21      82 .. 0.79
   2 !    6.8   0.0    0.0032       8.2       8      71 ..      91     153 ..      83     162 .. 0.75
   3 !   15.2   0.1   7.6e-06     0.019      53      87 ..     212     245 ..     209     289 .. 0.91

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.085
  ANAPC4_WD40 48 pdgklLavaysdgevrlldaes 69
                  +g  La   sd +++++d + 
   EPX71958.1 43 TNGLQLASTSSDETIKIYDHSR 64
                 6889999999*******99765 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0032
  ANAPC4_WD40   8 DLiAlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgk 71 
                   L+A   + +  + +R ++  v tl ++++++ ++++  +p++kl   +  d+++rl d   gk
   EPX71958.1  91 HLLACHDNGQITMWSRDSWLLVHTL-KSSSNKGISGITVHPSEKLAFSVGGDSKLRLWDLIRGK 153
                  5666555444445678888888888.78888889999999999998888899999988877766 PP

  == domain 3  score: 15.2 bits;  conditional E-value: 7.6e-06
  ANAPC4_WD40  53 Lavaysdgevrlldaesgkvvhslsvksekavtcl 87 
                  L v++++g+++++d+++g++++++ +++++ v+ +
   EPX71958.1 212 LIVGCDNGSIKVFDVNTGDLINEFAAHEKR-VKAI 245
                  89**********************999984.6655 PP

>> BBS2_Mid  Ciliary BBSome complex subunit 2, middle region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.11   2.9e+02      49      65 ..      88     104 ..      36     133 .. 0.57
   2 !   18.6   0.0   5.6e-07    0.0014      14      70 ..     211     269 ..     205     296 .. 0.80

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.11
    BBS2_Mid  49 ekerfayaleNGtvgvy 65 
                 +k+++++  +NG + ++
  EPX71958.1  88 TKKHLLACHDNGQITMW 104
                 33333444444444443 PP

  == domain 2  score: 18.6 bits;  conditional E-value: 5.6e-07
    BBS2_Mid  14 eLvvgsddfeirvfkee..elvaeitetekvvslarlekerfayaleNGtvgvyekker 70 
                 +L+vg d+ +i+vf+ +  +l++e+  +ek v  ++ + e+++ a + G+v v++k+  
  EPX71958.1 211 NLIVGCDNGSIKVFDVNtgDLINEFAAHEKRVKAISATTENLVSASSDGSVHVWDKTFN 269
                 79************755449***********************************9743 PP

>> Nucleoporin_N  Nup133 N terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0     0.069   1.8e+02     198     239 ..      22      67 ..       5      89 .. 0.69
   2 !    9.0   0.1   0.00021      0.53     171     235 ..      88     153 ..      82     164 .. 0.77
   3 !    4.7   0.0     0.004        10     200     231 ..     228     267 ..     192     278 .. 0.73

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.069
                    ---GG-EEEEEEECCT........CEEEEEETTSEEEEEEEETTCEE-EE CS
  Nucleoporin_N 198 asereeivqlridssr........rilytlsskgvirvydlsasngessl 239
                    ++e+++++ +++++s           l + ss+ +i++yd s +n    +
     EPX71958.1  22 QKESKPLWLFEAHESAltalatngLQLASTSSDETIKIYDHS-RN---IQ 67 
                    577788888888888888888877789999*********977.32...33 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00021
                    EEEEEEEEE-SSSS-......--SSS--G----GG-EEEEEEECCTCEEEEEETTSEEEEEEEETTCE CS
  Nucleoporin_N 171 slkckkicltkggls.sll..silpgvlsgasereeivqlridssrrilytlsskgvirvydlsasng 235
                    ++k    c+ +g +       ++l + l+ +s+++ i  +++++s ++ +++  ++++r +dl  +++
     EPX71958.1  88 TKKHLLACHDNGQITmWSRdsWLLVHTLK-SSSNKGISGITVHPSEKLAFSVGGDSKLRLWDLI-RGK 153
                    56666667777777633336666666666.7********************************9.443 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.004
                    -GG-EEEEEEECCT........CEEEEEETTSEEEEEEEE CS
  Nucleoporin_N 200 ereeivqlridssr........rilytlsskgvirvydls 231
                    + + i +++++++r        + l+++ss+g ++v+d +
     EPX71958.1 228 TGDLINEFAAHEKRvkaisattENLVSASSDGSVHVWDKT 267
                    55566666666666666667779**************955 PP

>> PQQ  PQQ enzyme repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.1   6.2e-06     0.016       3      23 ..     212     232 ..     211     237 .. 0.89

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 6.2e-06
                 EEEEETTSEEEEEETTTCCEE CS
         PQQ   3 vylgsadGylyAlDadTGkvl 23 
                 +++g+++G +  +D++TG+++
  EPX71958.1 212 LIVGCDNGSIKVFDVNTGDLI 232
                 789***************987 PP

>> Coatomer_WDAD  Coatomer WD associated region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   2.6e-06    0.0066     106     185 ..     199     279 ..     169     317 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 2.6e-06
                    XXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXX.......... CS
  Coatomer_WDAD 106 kleyqvdkifgGalLgvksegsvsfYDweqgklvrridvkk..vknVvwsddgelvalvskdtvyilsynleaveeedeeeg 185
                    +++ ++  +f  +l++ +++gs+ ++D+++g l+ +   ++  vk  +   + +lv   s+ +v++ +++ ++v e++  eg
     EPX71958.1 199 NTQLNCLCLFLSNLIVGCDNGSIKVFDVNTGDLINEFAAHEkrVKA-ISATTENLVSASSDGSVHVWDKTFNKVMELQAPEG 279
                    556678889999**************************99733444.5556789******************9999555544 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.0      0.13   3.3e+02     192     215 ..      38      61 ..      13      67 .. 0.78
   2 ?    6.5   0.1    0.0014       3.5     258     288 ..      90     120 ..      79     137 .. 0.84
   3 ?   -0.0   0.0      0.13   3.3e+02     194     216 ..     244     266 ..     217     305 .. 0.67

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.13
    Ge1_WD40 192 eaafspdGtalatasedGevkffq 215
                  +a++++G  la +s+d ++k + 
  EPX71958.1  38 LTALATNGLQLASTSSDETIKIYD 61 
                 4579999**************985 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0014
    Ge1_WD40 258 faitgadnnselklWscelWtClqtikfaps 288
                   + ++++n ++ +Ws ++W  + t+k +++
  EPX71958.1  90 KHLLACHDNGQITMWSRDSWLLVHTLKSSSN 120
                 45668999******************98765 PP

  == domain 3  score: -0.0 bits;  conditional E-value: 0.13
    Ge1_WD40 194 afspdGtalatasedGevkffqv 216
                 a+s+    l  as+dG v+ +  
  EPX71958.1 244 AISATTENLVSASSDGSVHVWDK 266
                 46777788999999999988853 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       904  (0.0504211); expected 358.6 (0.02)
Passed bias filter:                      579  (0.032294); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 2320.22
//
Query:       EPX71959.1  [L=1076]
Description: RNB-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.9e-61  206.8   0.0    6.7e-61  206.4   0.0    1.2  1  RNB            RNB domain
    1.4e-21   76.3   0.0    2.7e-21   75.4   0.0    1.5  1  OB_Dis3        Dis3-like cold-shock domain 2 (CSD2)
    3.2e-07   30.6   0.0    7.7e-07   29.4   0.0    1.6  1  Dis3l2_C_term  DIS3-like exonuclease 2 C terminal
     0.0049   16.6   0.0      0.011   15.5   0.0    1.5  1  Rrp44_CSD1     Rrp44-like cold shock domain


Domain annotation for each model (and alignments):
>> RNB  RNB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  206.4   0.0   1.5e-64   6.7e-61       2     325 ..     609     942 ..     608     943 .. 0.84

  Alignments for each domain:
  == domain 1  score: 206.4 bits;  conditional E-value: 1.5e-64
                 xxxxxxxxxxxxx.xxxxxx........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RNB   2 kdlrdllvitIdp.edakdl........DdAisieklpngnyelgVhIADvshyvkegspldkearkratsvyLpekvvpMLPqelsedlcSLnpgedr 91 
                 +d+r+  v+   + ++ +dl          A++i+++ ng y++g+hI+Dvs+++++gspld+e ++r+++v L++++v ++P+ l ++l +L++g+d+
  EPX71959.1 609 NDYRSEDVFLFTGhNSHSDLddvansfvSSAFHIRPTGNG-YHVGIHITDVSRVIEPGSPLDRELQRRGNTVSLCQRTVSLFPPALGDAL-TLKEGKDC 705
                 5555555444444234445522222233569999999998.***********************************************85.******** PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........xxxxxxxxxxxxx RF
         RNB  92 lalsvlidvdekgevlsveiylsvIkskarltydevqdlleqkdekeekktaedLellyelakalrkkRlkkgalefd........speikllldedkg 182
                 +++s+l+dv+++g+++ +++++++I++++ ++ +++++ll         +++ +L+l++++++++r++ l +  + +d        + e + ++d++++
  EPX71959.1 706 YTVSLLLDVSSSGKIRGTWVGWAIIHPRKAYSIEKANELL---------ESDPRLKLFSTVSSRIRAHHLGT-DIPLDrycklfrrWDEENTSFDPKQT 794
                 ****************************************.........57899*************88666.44554344444457777777777555 PP

                 xxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RNB 183 nrielkveeetkahslveelml.lANelvArfl.seleipailriheepsnekledliklakklglklednsskknlqeslekleeeeaeqllselllr 279
                 n         ++a +++++++l +AN++vA++l  e++++a+lr+++ ps+e+++ l+++a ++g+   d ss+k+l +sl  +e+++ +++l+ ++++
  EPX71959.1 795 NLFA------SSAVEVLRQTLLdAANRAVANHLrREFRDNAFLRVQKMPSRENCRMLQSMAVQMGCV-LDLSSPKSLLRSLCLIEDDTIRNILQLYYYK 886
                 4333......4488888888888*******************************************9.8888888************************ PP

                 xxxxxxxxxxx....xxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxx RF
         RNB 280 llkeakyssep....vgHfgLaleeY......thfTSPirRYpDlvvhrllkalla 325
                 ++++a+y++ +    +   +L+l         thfT P+ RY+Dl+vh++l+ ll+
  EPX71959.1 887 ITPRAVYEMPKyrpnIAMSMLSLTLDdetddsTHFTEPLDRYADLIVHYQLQLLLQ 942
                 ********888877755556665555667888*********************997 PP

>> OB_Dis3  Dis3-like cold-shock domain 2 (CSD2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.4   0.0     6e-25   2.7e-21       2      76 ..     502     576 ..     501     577 .. 0.97

  Alignments for each domain:
  == domain 1  score: 75.4 bits;  conditional E-value: 6e-25
                 EEE--SSTTS--EEEETTSSTTTHHHHTTTTTT--EEEEE----TT-SS-EEEEEEE-HHHHHHHHHHHHHHHHT CS
     OB_Dis3   2 vlfkPldkrlPriliptkelpeeflenpeelegklfvvkidsWsetsryPlGeivksLGeagdieaeteaiLlen 76 
                 v+fkP dkr+P i ipt+++p++flen+++++++lf++ i++W+ ts +P+G +v +LG++  ie++ +a+L + 
  EPX71959.1 502 VWFKPSDKRVPLIAIPTEQAPSDFLENDQKYADSLFLASIKRWPVTSLHPFGMLVGELGPMNFIESQVAALLHDT 576
                 9***********************************************************************875 PP

>> Dis3l2_C_term  DIS3-like exonuclease 2 C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4   0.0   1.7e-10   7.7e-07       6      52 ..     993    1040 ..     991    1065 .. 0.86

  Alignments for each domain:
  == domain 1  score: 29.4 bits;  conditional E-value: 1.7e-10
  Dis3l2_C_term    6 kavVvnVldssfDVlileyGlekRVyldklplkefefdk.tkvLtLyW 52  
                      +vV+ +  s+fDV+ + +G+ekRV+ld l+l ++++++ ++vL Ly 
     EPX71959.1  993 DGVVCFIAPSYFDVFFPGLGMEKRVHLDLLNLIHVRYEEdQGVLFLYS 1040
                     699******************************9***97577888884 PP

>> Rrp44_CSD1  Rrp44-like cold shock domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   2.3e-06     0.011      19      73 ..     322     376 ..     306     383 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 2.3e-06
                 TTSEEEEEEEEESSBTTEEEEE-SSSSS-EEEESHHHHTS--TT-EEEEEE--GG CS
  Rrp44_CSD1  19 ngvlyqgniqiseynflegsvslprfskpvlivgqknlnrafngdqvivellpqs 73 
                 +  l  g + +s+ n  +  v +  +   v+i g k+ nra++gd v vell   
  EPX71959.1 322 EHRLVTGVLIVSKKNRSDAFVHVSGLDAEVFICGSKDRNRALEGDVVAVELLDVE 376
                 556778889999999999*********************************9754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1076 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       530  (0.029561); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.74u 0.27s 00:00:01.01 Elapsed: 00:00:00.43
# Mc/sec: 7487.00
//
Query:       EPX71960.1  [L=87]
Description: histone-like transcription factor family [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.5e-13   49.3   0.2    5.3e-13   49.1   0.2    1.1  1  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a
    1.7e-05   25.2   0.1      2e-05   25.0   0.1    1.0  1  Histone        Core histone H2A/H2B/H3/H4
  ------ inclusion threshold ------
      0.011   15.7   0.4      0.018   15.1   0.4    1.4  1  TFIID-18kDa    Transcription initiation factor IID, 18kD subu
      0.015   15.2   0.6       0.23   11.3   0.1    2.0  2  ISP3_C         ISP3 C-terminal
      0.034   14.1   0.2      0.066   13.2   0.2    1.5  1  TFIID_30kDa    Transcription initiation factor TFIID 23-30kDa
      0.037   14.5   0.7      0.048   14.2   0.7    1.3  1  TFIID_20kDa    Transcription initiation factor TFIID subunit 
      0.043   14.0   0.1       0.05   13.8   0.1    1.2  1  CENP-W         CENP-W protein
      0.047   13.8   0.2      0.055   13.6   0.2    1.2  1  CENP-T_C       Centromere kinetochore component CENP-T histon


Domain annotation for each model (and alignments):
>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.1   0.2   2.4e-16   5.3e-13       3      64 ..      10      71 ..       8      72 .. 0.96

  Alignments for each domain:
  == domain 1  score: 49.1 bits;  conditional E-value: 2.4e-16
                   XXHHHHHHHHHCCTTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHH CS
  CBFD_NFYB_HMF  3 LPiarvkkImksdpdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehiklA 64
                   LP++rvkkI+k+d+d+   ++++  l++ ++e+fi++la+++ +++k +krK i++ +++ +
     EPX71960.1 10 LPLSRVKKIIKQDEDIHSCSNASALLVSVATEMFIQKLADQSFQLAKLQKRKGIQYRDVADV 71
                   9*********************************************************9866 PP

>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.1   8.8e-09     2e-05      65     130 ..      10      74 ..       4      75 .. 0.84

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 8.8e-09
                 HHHHHHHHHHH.TTSSSXEEXHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTXSEEXHHHHHHHHHH CS
     Histone  65 lpfaRvvreivksekedlrisaeavlalqealEallvelfeeAnllakhaKRvTitpkDiqlArrl 130
                 lp +R v++i k++++  + s+ + l++  a+E ++  l+ ++  lak  KR+ i+ +D+  ++r+
  EPX71960.1  10 LPLSR-VKKIIKQDEDIHSCSNASALLVSVATEMFIQKLADQSFQLAKLQKRKGIQYRDVADVVRK 74 
                 899**.77777756666666666677777799****************************999997 PP

>> TFIID-18kDa  Transcription initiation factor IID, 18kD subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   0.4   7.8e-06     0.018      22      69 ..      30      77 ..      14      87 .] 0.81

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 7.8e-06
                 HHHHHHHHHHHHHHHHHHHHHHHC-XXXX...XXXXXXXXXXXXXXXX CS
  TFIID-18kDa 22 qetvqlledlvrgyliellqqaakvaklrgsrkitlEDllfliRkDkk 69
                 ++++ l+    + ++  l  q++++akl++++ i+  D+  ++RkD +
   EPX71960.1 30 NASALLVSVATEMFIQKLADQSFQLAKLQKRKGIQYRDVADVVRKDDQ 77
                 5555566666678999******************************74 PP

>> ISP3_C  ISP3 C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.1     0.051   1.1e+02      48      74 ..       9      35 ..       6      41 .. 0.81
   2 ?   11.3   0.1    0.0001      0.23      32      64 ..      46      78 ..      37      82 .. 0.88

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.051
                EEETTTEEEEE--------------EE CS
      ISP3_C 48 vIplsdvkavLygssqlsrvetdanll 74
                v+pls vk+++ ++++ ++ +  ++ll
  EPX71960.1  9 VLPLSRVKKIIKQDEDIHSCSNASALL 35
                689*********999998877766665 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 0.0001
                ETTTTEEEEEETTEEEEEETTTEEEEE------ CS
      ISP3_C 32 dlsekvlelsldkkvrvIplsdvkavLygssql 64
                +l++++++l+  +k++ I++ dv++v+ +++q 
  EPX71960.1 46 KLADQSFQLAKLQKRKGIQYRDVADVVRKDDQF 78
                568899*********************999986 PP

>> TFIID_30kDa  Transcription initiation factor TFIID 23-30kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.2     3e-05     0.066      27      49 ..      35      57 ..      21      58 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 3e-05
  TFIID_30kDa 27 lvsLaaqKFisdiaadAyqyski 49
                 lvs+a++ Fi+  a++++q +k+
   EPX71960.1 35 LVSVATEMFIQKLADQSFQLAKL 57
                 9*******************997 PP

>> TFIID_20kDa  Transcription initiation factor TFIID subunit A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.7   2.1e-05     0.048      21      59 ..      30      69 ..      13      77 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.1e-05
                 HHHHHHHHHHHH.HHHHHHHHHHHHHHHTT-SEE-HHHHH CS
  TFIID_20kDa 21 dvedlLleiadd.FvesvtkfacklakhRksdklevrDiq 59
                 +   lL+ +a + F++ + +++ +lak  k + ++ rD+ 
   EPX71960.1 30 NASALLVSVATEmFIQKLADQSFQLAKLQKRKGIQYRDVA 69
                 5567899998544*************************96 PP

>> CENP-W  CENP-W protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.1   2.2e-05      0.05      17      68 ..      10      61 ..       2      75 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 2.2e-05
      CENP-W 17 aprgflkrvlkrrkphlrleascdllvhlncllfirrlaeesrtnacenksg 68
                 p + +k+++k+       ++++ llv +   +fi++la++s   a  +k +
  EPX71960.1 10 LPLSRVKKIIKQDEDIHSCSNASALLVSVATEMFIQKLADQSFQLAKLQKRK 61
                5777789999999999999999******************998777655554 PP

>> CENP-T_C  Centromere kinetochore component CENP-T histone fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.2   2.5e-05     0.055       8      88 ..      10      86 ..       3      87 .] 0.77

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 2.5e-05
    CENP-T_C  8 lPaavvkklakrfakasgskaklekealkalekasdkffeqvgeDLeayakHagRKtidesDvilLmkrqrkvtskttlfs 88
                lP + vkk+ k+        +  ++++   +  a++ f++++++     ak  +RK i+  Dv   +++  + +  + lfs
  EPX71960.1 10 LPLSRVKKIIKQDEDI----HSCSNASALLVSVATEMFIQKLADQSFQLAKLQKRKGIQYRDVADVVRKDDQFEFLSDLFS 86
                6666666665554333....455666666788899********************************99888776666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       602  (0.0335769); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.43
# Mc/sec: 605.61
//
Query:       EPX71961.1  [L=259]
Description: 6-phosphogluconolactonase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-67  227.9   0.0    1.6e-67  227.7   0.0    1.0  1  Glucosamine_iso  Glucosamine-6-phosphate isomerases/6-phospho


Domain annotation for each model (and alignments):
>> Glucosamine_iso  Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  227.7   0.0   8.8e-72   1.6e-67       4     225 .]      10     238 ..       7     238 .. 0.93

  Alignments for each domain:
  == domain 1  score: 227.7 bits;  conditional E-value: 8.8e-72
                      HHHHHHHHHHHHHHHHHHHHHHS-EEEEE--SHCHHHHHHHHHCSG.GGGGS-GGGEEEEESEEESS-TTSTT-HHHHHHHHTGGGS-.--GGG CS
  Glucosamine_iso   4 eelaealaarivealeealaergraslalsGGstpkalyealaeeeeaaaaldwskvhvflgDERfVpaddpdsNaklareallskvk.ipean 96 
                      +++a+al +++ ++ ++a+a++gr++lalsGGs++k l e l++++ +  ++d+sk++vf++DER+Vp +d++sN++l++e l++ ++ + +++
       EPX71961.1  10 SSVAKALGQYVKTKYDAAMAKHGRFTLALSGGSLAKVLAEGLSQQK-D--NIDFSKWEVFFADERIVPLEDENSNYALCKEVLFDVLPgFVPEQ 100
                      6799***************************************866.3..69*********************************9988889** PP

                      EE-S-TTSST....HHHHHHHHHHHHHHHHCC....SSSSSESEEEE---TTS-BTTB-TTCHHHHCSSSSEEEESSBSTSSS-EEEE-HHHHT CS
  Glucosamine_iso  97 vhpikesaae....apeaaaaayeeelkella....kelpvfDlvlLGmGpDGHtaSLFPgspeleetdrlvvavedspkpppeRitlTlpvln 182
                      +h+i+++  +    + +a+a++ye++l +++a     ++pvfDl+lLG+GpDGHt+SLFP+++ lee+ ++v++v+dspkpp+eRitlT+pv+ 
       EPX71961.1 101 IHTIDTEFLKqkplDSQAVADEYEKQLVHVFAnastVKVPVFDLMLLGCGPDGHTCSLFPDHELLEEDVAWVAPVTDSPKPPKERITLTIPVVT 194
                      ****976665555666***************99***9********************************************************* PP

                      TCSEEEEEEESHHHHHHHHHHHTT..TTTSGGGGH-.-S.SEEEE CS
  Glucosamine_iso 183 sarevlflvaGeeKaealeevlsgedpeelPaalve.gq.gellw 225
                      +a +v+f+++G++K+++l  v++ ++ ++lP+al++  + +++ w
       EPX71961.1 195 HALSVAFVTTGAAKQDILPVVIE-DTTSRLPSALISrAHpDRVSW 238
                      **********************8.7789*******5333366666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       477  (0.0266049); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 1806.07
//
Query:       EPX71962.1  [L=288]
Description: CMGC/CDK/CDK5 protein kinase Pef1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.9e-74  248.8   0.0    6.7e-74  248.6   0.0    1.0  1  Pkinase        Protein kinase domain
      1e-35  123.3   0.0    1.3e-35  122.9   0.0    1.1  1  Pkinase_Tyr    Protein tyrosine kinase
     0.0001   21.4   0.0      0.019   13.9   0.0    2.1  1  Haspin_kinase  Haspin like kinase domain
    0.00063   19.7   0.0      0.095   12.6   0.0    2.2  2  APH            Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.061   12.6   0.0       0.32   10.3   0.0    2.1  2  Kinase-like    Kinase-like
      0.099   12.0   0.0       0.26   10.6   0.0    1.6  1  Kdo            Lipopolysaccharide kinase (Kdo/WaaP) family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  248.6   0.0   2.2e-77   6.7e-74       1     264 []       3     285 ..       3     285 .. 0.94

  Alignments for each domain:
  == domain 1  score: 248.6 bits;  conditional E-value: 2.2e-77
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHH...HHSS-- CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladlle...rkgsls 96 
                 y++leklGeG++++Vy+a +++tg+ vA+K+i+ + ++ +  ++++rEi+++k+l+hpni+ l++v++++++l+lv+ey+e++ l++++    ++g+ls
  EPX71962.1   3 YQRLEKLGEGTYANVYRAQNRTTGEVVALKIIRIDPEEGTP-STAIREISLMKELRHPNIMSLIDVLHTDNKLMLVFEYMEKD-LKKYMDaygNQGALS 99 
                 7899******************************9888755.7**************************************87.66666666699**** PP

                 HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.BCTTTSCGGGS-HHHH.TTSCBSHHHHHHHHHHHHHHHHHS CS
     Pkinase  97 eeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.ltsfvgtseYlAPEvl.keneyskkvDvWslGvilyelltg 193
                 ++e+k++++q+l+g++++H+++++HrDlKp+N+Li+++gelK++DFGla+ +    + ++++v+t +Y+AP vl +++ y +++D+Ws+G+i++e+ tg
  EPX71962.1 100 PAEVKNFTRQLLSGISFCHENRVLHRDLKPQNLLINNRGELKLADFGLARSIGIPVNtFSNEVVTLWYRAPDVLlGSKAYNTSIDIWSVGCIMAEMATG 198
                 ****************************************************9998889***************99*********************** PP

                 S-STTTSSHHHHHHHHHHTHHHHHHHCT.SHH...HHHTTS......................-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 194 kppfsgekgkekvekeldqlekilkilg.etkeklpeasei......................seeakdllkkllkkdpkkRltaeellqhpyl 264
                 +p+f+g++       + dql ki+++lg +t++++p  s +                      ++  +dll+++l+ +p+ R+t +++lqh ++
  EPX71962.1 199 RPLFAGSN-------NEDQLLKIFRLLGtPTEQTWPGISLLqdykttyplyksqdlnhlmphfDPLGLDLLRRMLRLQPELRITGDDALQHAWF 285
                 *****444.......556888899999977788888888779999999*********************************************8 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.9   0.0   4.4e-39   1.3e-35       4     215 ..       6     211 ..       3     227 .. 0.90

  Alignments for each domain:
  == domain 1  score: 122.9 bits;  conditional E-value: 4.4e-39
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHT.CTTTS CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkk.ekekl 100
                   +klGeG++++V++++ +    ++ + Va+K+++ + +e + +  ++e+++mk+l+hpni++l+ v   +++l++v+ey+++ dL+k++ +  ++ +l
   EPX71962.1   6 LEKLGEGTYANVYRAQNR----TTGEVVALKIIRIDPEEGTPSTAIREISLMKELRHPNIMSLIDVLHTDNKLMLVFEYMEK-DLKKYMDAYgNQGAL 98 
                  689*************99....88999*************9***************************************98.9*****997568899 PP

                  BHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE.EEHHHHHHHHHHHHHH CS
  Pkinase_Tyr 101 tlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk.ftsksDvWsfGvllwE 197
                  +  ++ +f+ q+ +G+++ ++++++Hrdl  +N L++++   k++DfGLar+i      ++ +++ + + + ap +l  +k ++++ D+Ws G ++ E
   EPX71962.1  99 SPAEVKNFTRQLLSGISFCHENRVLHRDLKPQNLLINNRGELKLADFGLARSI--GIPVNTFSNEVVTLWYRAPDVLLGSKaYNTSIDIWSVGCIMAE 194
                  *****************************************************..44445556666777777****98777699999*********** PP

                  HHTTSSGTTTTSHHHHHH CS
  Pkinase_Tyr 198 iftlgespypglkneevl 215
                  ++t g+  ++g +ne+ l
   EPX71962.1 195 MAT-GRPLFAGSNNEDQL 211
                  **9.88888888777655 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.0   6.4e-06     0.019     105     256 ..       6     150 ..       1     180 [. 0.60

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 6.4e-06
  Haspin_kinase 105 llndseklssevyqtke..kdkevvlKviplevledvtiskelslkelkslklvkgtypglllllqdkvlkekpdfyseqqlflvlllkdkGtdLe 198
                    l + +e+ + +vy++++  + + v+lK+i ++  e+ t s  +     +++ l+k      ++ l d +           ++ l+l+++++ +dL+
     EPX71962.1   6 LEKLGEGTYANVYRAQNrtTGEVVALKIIRIDP-EEGTPS--TA---IREISLMKELRHPNIMSLIDVLHT---------DNKLMLVFEYMEKDLK 86 
                    455688888899988887666777888888843.333333..11...222233333311111122222222.........2345556666666665 PP

  Haspin_kinase 199 ev.......klkswkqalsifwqivkiLyvaEtkfeFEHRdLhldniLvdknlnvtlidlklsRl 256
                    +           s +++++   q ++ ++   ++ +  HRdL+ +n L+++ ++  l d+ l+R 
     EPX71962.1  87 KYmdaygnqGALSPAEVKNFTRQLLSGISFCHEN-RVLHRDLKPQNLLINNRGELKLADFGLARS 150
                    5544443323345566666666777777665444.456999999999999999999999999996 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.1   0.0    0.0064        19       3      76 ..       7      83 ..       5     112 .. 0.71
   2 !   12.6   0.0   3.2e-05     0.095     165     196 ..     119     148 ..     103     152 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0064
                EEE--.SSCEEEEEEETT.--EE.EEEE-TT...S-HHHHHHHHHHHHHHHHTT-.B--B-CTTBS-EEETTEEEEEEE- CS
         APH  3 relsggasnrtylvttpa.gryv.lrrnppa...raaeeirrevallrlLakagv.pvPevlagdtddeeigllfaliey 76
                + l+ g++  +y+ +  + g++v l++++      ++ ++ re  l++ L+  ++ +   vl+    d+ + l+f+ +e 
  EPX71962.1  7 EKLGEGTYANVYRAQNRTtGEVVaLKIIRIDpeeGTPSTAIREISLMKELRHPNImSLIDVLH---TDNKLMLVFEYMEK 83
                67999*99*9******99887776666555522277777779999999999888876667777...44555556666555 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 3.2e-05
                 -EEEE-SS-SGGGEEEC..TTEEEEE---TT- CS
         APH 165 ptvllHgDlhpgNllvdpddgrvtGviDfeda 196
                 + ++lH+Dl+p+Nll++ + g++  + Df++a
  EPX71962.1 119 ENRVLHRDLKPQNLLIN-NRGEL-KLADFGLA 148
                 5689*************.66665.47777776 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0       0.2     6e+02      18      46 ..       7      35 ..       2      58 .. 0.83
   2 ?   10.3   0.0   0.00011      0.32     150     200 ..     107     157 ..      53     201 .. 0.71

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.2
  Kinase-like 18 ellkkgdrsvvfevkdqetgeplavkvfl 46
                 e l++g    v+++++  tge +a+k+  
   EPX71962.1  7 EKLGEGTYANVYRAQNRTTGEVVALKIIR 35
                 6678888899************9999865 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00011
  Kinase-like 150 TlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvl 200
                  T ql+  +   +++ ++h +++++nll +++g l+l +f+  +  g  v  
   EPX71962.1 107 TRQLLSGISFCHENRVLHRDLKPQNLLINNRGELKLADFGLARSIGIPVNT 157
                  555555556668899************************977777766655 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   8.7e-05      0.26      57     166 ..      45     145 ..      39     154 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 8.7e-05
         Kdo  57 ravrEfrllkrLeeagvavpkpvaagavkvgleyrAlllterlegaqdLedllakwae...laeelkrallkavgrliaklhragvnHadlyaknillq 152
                 +a rE++l+k+L++  +  +  v    +k       +l+ e +e  +dL++++  + +   l+ +  ++  +++   i+  h+  v H+dl ++n+l++
  EPX71962.1  45 TAIREISLMKELRHPNIMSLIDVLHTDNK------LMLVFEYME--KDLKKYMDAYGNqgaLSPAEVKNFTRQLLSGISFCHENRVLHRDLKPQNLLIN 135
                 66777777777777766555555444333......468888887..5888888776656778888888888999999999******************* PP

         Kdo 153 qeeeeeaeiwliDl 166
                 +++    e+ l D+
  EPX71962.1 136 NRG----ELKLADF 145
                 *99....7777777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       366  (0.0204139); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.51u 0.31s 00:00:00.82 Elapsed: 00:00:00.47
# Mc/sec: 1857.11
//
Query:       EPX71963.1  [L=181]
Description: NatB N-acetyltransferase complex catalytic subunit Nat3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.9e-11   43.6   0.0      4e-11   43.2   0.0    1.2  1  Acetyltransf_1   Acetyltransferase (GNAT) family
    5.4e-08   32.8   0.0    7.4e-08   32.4   0.0    1.2  1  Acetyltransf_10  Acetyltransferase (GNAT) domain
    5.8e-08   33.0   0.0    1.1e-07   32.1   0.0    1.5  1  Acetyltransf_7   Acetyltransferase (GNAT) domain
    0.00019   21.4   0.0    0.00033   20.6   0.0    1.3  1  FR47             FR47-like protein
     0.0028   17.7   0.1     0.0043   17.1   0.1    1.3  1  Acetyltransf_9   Acetyltransferase (GNAT) domain


Domain annotation for each model (and alignments):
>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.2   0.0   1.1e-14     4e-11      31     117 .]      38     129 ..       9     129 .. 0.80

  Alignments for each domain:
  == domain 1  score: 43.2 bits;  conditional E-value: 1.1e-14
                     TTCEEEE.....EEETTEEEEEEEEEEEETTSTTEEEEEEEEESGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTEHHHHHHHHH.TTE CS
  Acetyltransf_1  31 eaegllv.....aeedgeliGfisllkipdekggvayieslaVspeyrgkGlGsaLlealeerareegikkivlaveedndaairlYek.lGF 117
                       ++l+v     a+e+  l G+i ++        ++++  + V+p++r+ Gl+++++++le    +e ++ + l v+ +n  ai++Y + lG+
      EPX71963.1  38 KWPSLCVaqesiASENSSLMGYIIGKSEGKGTDWHTHVTAITVAPSFRRLGLAKTMMDYLETVGDSEKAYFVDLFVRTSNALAINFY-RgLGY 129
                     233566645665667788*****999999988899********************************99999***************.88*98 PP

>> Acetyltransf_10  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.4   0.0   2.1e-11   7.4e-08      35     109 ..      49     132 ..      31     137 .. 0.86

  Alignments for each domain:
  == domain 1  score: 32.4 bits;  conditional E-value: 2.1e-11
  Acetyltransf_10  35 vaeeggkivGviel.rdgs.......hisllfVdpeyrgqGigkaLleaveeeaekdgikl.eltvnasp.yavpfYeklGFkav 109
                      +a e+ +++G+i + ++++       h++ + V+p++r+ G++k +++++e+  + ++    +l v+ s+  a++fY+ lG+ + 
       EPX71963.1  49 IASENSSLMGYI-IgKSEGkgtdwhtHVTAITVAPSFRRLGLAKTMMDYLETVGDSEKAYFvDLFVRTSNaLAINFYRGLGYSVY 132
                      577888999999.3344445788999***************************877777778********99**********876 PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.1   0.0   3.1e-11   1.1e-07       8      75 ..      50     130 ..      30     131 .. 0.67

  Alignments for each domain:
  == domain 1  score: 32.1 bits;  conditional E-value: 3.1e-11
                     EEETTEEEEEEEEEEES......TCTEEEEE-GGGTTSSHHHHHHHH.......TTSEEEEE.EEEETHHHHHHHHHHTTEE CS
  Acetyltransf_7   8 aeddgkivGfialslld......aeitrlaVdpeyrgkGiGraLlea.......aekgiile.qlelnaekaikfYeklGFe 75 
                     a ++   +G+i+ + ++      ++ t + V+p++r+ G+++ ++++       + k + +   +++++  ai+fY+ lG+ 
      EPX71963.1  50 ASENSSLMGYIIGKSEGkgtdwhTHVTAITVAPSFRRLGLAKTMMDYletvgdsE-KAYFVDlFVRTSNALAINFYRGLGYS 130
                     4444566677777777777755555555******************844433221.2222223334444499********96 PP

>> FR47  FR47-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   9.2e-08   0.00033      22      81 ..      73     133 ..      67     137 .. 0.84

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 9.2e-08
                 SSEEEEEE-GGG-SSSHHHHHHHHHHH.HHHHS-S-EEEEEETT-HHHHHHHHHHT-EEEE CS
        FR47  22 gelgalqvlpehrrrGlgsrlvkalak.eiaergktvllvvvasNtpsirlyeklGfekie 81 
                 + + a+ v p++rr Gl++ +   l   + +e+ + v l v++sN  +i++y  lG+ +++
  EPX71963.1  73 THVTAITVAPSFRRLGLAKTMMDYLETvGDSEKAYFVDLFVRTSNALAINFYRGLGYSVYR 133
                 67889****************9999541334467777789*****************9884 PP

>> Acetyltransf_9  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.1   1.2e-06    0.0043      75     127 ..      74     131 ..      65     132 .. 0.92

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 1.2e-06
                     EEEEEEE-CCGTTS-HHHHHHHHHHHHHHHTT--EEEE--.....SSHHHHHTTT-EE CS
  Acetyltransf_9  75 gvtgVavapehrgrgvlskLlaraleemreegqplsllfP.....ssipiYrrfGyei 127
                      vt+++vap  r+ g+++ +++++ +  ++e++ ++ lf       +i++Yr +Gy++
      EPX71963.1  74 HVTAITVAPSFRRLGLAKTMMDYLETVGDSEKAYFVDLFVrtsnaLAINFYRGLGYSV 131
                     699************************************988777779********75 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       309  (0.0172346); expected 358.6 (0.02)
Passed bias filter:                      278  (0.0155056); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1363.08
//
Query:       EPX71964.1  [L=165]
Description: 60S ribosomal protein/L12A [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.5e-23   80.4   0.7    1.1e-22   79.6   0.7    1.3  1  Ribosomal_L11_N  Ribosomal protein L11, N-terminal domain
    4.1e-17   62.4   1.0    7.7e-17   61.6   0.2    1.8  2  Ribosomal_L11    Ribosomal protein L11, RNA binding domain


Domain annotation for each model (and alignments):
>> Ribosomal_L11_N  Ribosomal protein L11, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.6   0.7   1.2e-26   1.1e-22       3      65 .]       5      69 ..       3      69 .. 0.94

  Alignments for each domain:
  == domain 1  score: 79.6 bits;  conditional E-value: 1.2e-26
  Ribosomal_L11_N  3 k...vvkvvklrvpaGkAtpaPplGpaLGplGlnikkfckefnkaTkdkkglripVkitvyqdrsf 65
                     +   +vk+v +r  +G+++ ++ l+p++GplGl++kk++++++kaTkd+kglr++Vk+t+ q+r++
       EPX71964.1  5 FdpnEVKTVIMRAVGGEVAGGSTLAPKIGPLGLSPKKVGEDIAKATKDWKGLRVTVKLTI-QNRQA 69
                     555589******************************************************.***96 PP

>> Ribosomal_L11  Ribosomal protein L11, RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.28   2.5e+03       9      43 ..      14      51 ..       9      65 .. 0.50
   2 !   61.6   0.2   8.6e-21   7.7e-17       2      70 .]      74     143 ..      73     143 .. 0.94

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.28
                   HHHHHTXSSXXSSTTTSXXEE..EEHHHHHH.HHHHHG CS
  Ribosomal_L11  9 LkkaagiekgsgkpgketvGt..vslkqvye.IAkiKk 43
                   +++a+g e   g++   ++G   +s k+v e IAk+ k
     EPX71964.1 14 IMRAVGGEVAGGSTLAPKIGPlgLSPKKVGEdIAKATK 51
                   56666655444444333444322344444322666655 PP

  == domain 2  score: 61.6 bits;  conditional E-value: 8.6e-21
                    --SHHHHHHHHHTXSSXXSSTTTSXX..EEEEHHHHHHHHHHHGGGHT.XS.SHHHHHHHHHHHHCTTTEEE CS
  Ribosomal_L11   2 tPptsylLkkaagiekgsgkpgketv..GtvslkqvyeIAkiKksdln.aalsleaavksilgtArsmGikV 70 
                    +P++s+l++ka++++ +++k+ k++v  G+vs+++++e+A++++  ++ a+ +l+++vk+ilgtA s+G++V
     EPX71964.1  74 VPSASALVIKALKEPARDRKKDKGVVhsGNVSIDEIVEVARTMR-FKSlAK-DLSGTVKEILGTAFSVGCTV 143
                    7***********************99******************.555266.******************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       584  (0.0325729); expected 358.6 (0.02)
Passed bias filter:                      493  (0.0274974); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.29s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 1144.04
//
Query:       EPX71965.1  [L=1010]
Description: transcription factor tfiiic complex subunit sfc4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.4e-14   50.9  17.1     0.0056   16.7   1.2   10.3 11  TPR_2     Tetratricopeptide repeat
    1.5e-13   49.8  15.3    4.6e-06   26.4   0.2    7.6  8  TPR_8     Tetratricopeptide repeat
    9.5e-13   47.8   2.3      0.073   13.9   0.0    8.4  8  TPR_14    Tetratricopeptide repeat
    1.3e-12   47.0  16.3    0.00012   21.7   0.7    7.8  8  TPR_1     Tetratricopeptide repeat
    3.7e-09   37.0  12.1      0.021   15.3   0.2    7.7  9  TPR_19    Tetratricopeptide repeat
    5.9e-08   32.9  18.0        0.3   11.4   0.2    7.9  8  TPR_12    Tetratricopeptide repeat
    3.2e-06   27.2   9.6      0.006   16.7   0.4    6.4  8  TPR_9     Tetratricopeptide repeat
    6.2e-05   22.7   7.1       0.13   12.4   0.1    6.0  6  TPR_7     Tetratricopeptide repeat
    9.7e-05   22.9   0.6         12    6.6   0.0    6.2  7  TPR_16    Tetratricopeptide repeat
    0.00057   19.2   4.1     0.0035   16.6   0.2    3.5  4  TPR_15    Tetratricopeptide repeat
     0.0052   17.3   9.7       0.29   11.9   0.1    6.1  5  TPR_6     Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.016   15.1  15.1       0.42   10.5   0.3    5.7  5  TPR_10    Tetratricopeptide repeat
      0.067   13.1   1.2       0.18   11.7   0.5    2.0  2  Ferritin  Ferritin-like domain
        3.3    7.5   8.8         26    4.6   0.1    4.9  5  TPR_11    TPR repeat


Domain annotation for each model (and alignments):
>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0      0.11   1.4e+02      11      33 ..     145     167 ..     143     168 .. 0.88
   2 ?    2.1   0.0       0.2   2.6e+02       2      16 ..     170     184 ..     169     186 .. 0.91
   3 ?    0.1   0.1       0.9   1.2e+03      12      32 ..     218     238 ..     208     239 .. 0.75
   4 ?   -1.2   0.0       2.4   3.1e+03       4      26 ..     282     304 ..     280     305 .. 0.82
   5 ?   -1.8   0.0       3.7   4.7e+03       3      25 ..     326     348 ..     325     352 .. 0.69
   6 ?    5.1   0.0     0.022        28       6      24 ..     403     421 ..     400     422 .. 0.92
   7 ?    3.3   0.0     0.083   1.1e+02       4      24 ..     436     456 ..     434     456 .. 0.92
   8 !   16.0   0.1   7.3e-06    0.0094       3      34 .]     470     501 ..     468     501 .. 0.91
   9 ?   -1.9   0.0       4.1   5.2e+03       3      22 ..     504     523 ..     503     532 .. 0.84
  10 ?    3.4   0.0     0.081     1e+02       7      34 .]     848     875 ..     842     875 .. 0.80
  11 !   16.7   1.2   4.4e-06    0.0056       2      32 ..     926     956 ..     925     957 .. 0.97

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.11
       TPR_2  11 yyklgdyeeAleafekAleldPn 33 
                  ++ g++ eA +  e+ +++d n
  EPX71965.1 145 FAQEGNFTEAQKIAEEIVRIDNN 167
                 5789*************999976 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.2
       TPR_2   2 ealynlGlayyklgd 16 
                  a+ +lG++++++g+
  EPX71965.1 170 AAWKMLGECHRQRGN 184
                 59***********98 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.9
       TPR_2  12 yklgdyeeAleafekAleldP 32 
                 + l  +++A  ++ +A+   P
  EPX71965.1 218 ESLEFWDQADYCYSRAILAKP 238
                 56667899********97665 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 2.4
       TPR_2   4 lynlGlayyklgdyeeAleafek 26 
                 l  l+++y++   + eAl+afe 
  EPX71965.1 282 LKHLAEVYIRIRTPGEALNAFET 304
                 5678899999888999***9985 PP

  == domain 5  score: -1.8 bits;  conditional E-value: 3.7
       TPR_2   3 alynlGlayyklgdyeeAleafe 25 
                 al+  +++++   ++  A+++ +
  EPX71965.1 326 ALNLYAELLLLDHQWSNAIQLIN 348
                 56667777777777777777655 PP

  == domain 6  score: 5.1 bits;  conditional E-value: 0.022
       TPR_2   6 nlGlayyklgdyeeAleaf 24 
                  lG a +k gd+eeA+++f
  EPX71965.1 403 KLGIARIKIGDLEEAAHHF 421
                 5999*************99 PP

  == domain 7  score: 3.3 bits;  conditional E-value: 0.083
       TPR_2   4 lynlGlayyklgdyeeAleaf 24 
                 l n+++ y++  +++ Ale++
  EPX71965.1 436 LGNIAKTYMEVERLDLALEYY 456
                 6699****************9 PP

  == domain 8  score: 16.0 bits;  conditional E-value: 7.3e-06
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldPnn 34 
                 +++ +Gl+y++l+++e A +++e+ l  d +n
  EPX71965.1 470 LWFDMGLCYLELKEFEHAQQCMEAILLVDNDN 501
                 7**********************999888765 PP

  == domain 9  score: -1.9 bits;  conditional E-value: 4.1
       TPR_2   3 alynlGlayyklgdyeeAle 22 
                 al  l+++ + +++ + Al+
  EPX71965.1 504 ALVKLAEINELQDNRDAALA 523
                 68899999999***999986 PP

  == domain 10  score: 3.4 bits;  conditional E-value: 0.081
       TPR_2   7 lGlayyklgdyeeAleafekAleldPnn 34 
                  G + +++  +  A++++ +A   +Pn+
  EPX71965.1 848 YGHIMARSRSWIPAINYYSRAYVMNPNC 875
                 5666777777777*************95 PP

  == domain 11  score: 16.7 bits;  conditional E-value: 4.4e-06
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleldP 32 
                 ealynl++ay  lg    A++++ek+lel P
  EPX71965.1 926 EALYNLAKAYHFLGLEHHAVQYYEKVLELSP 956
                 89***************************99 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0     0.028        36       9      33 ..     143     167 ..     137     168 .. 0.87
   2 ?   -0.5   0.0       1.6     2e+03       6      21 ..     403     418 ..     400     421 .. 0.83
   3 ?    5.7   0.1     0.016        20       4      24 ..     436     456 ..     434     460 .. 0.93
   4 !   15.7   0.0   9.7e-06     0.012       2      33 ..     469     500 ..     468     501 .. 0.91
   5 ?   -1.2   0.0       2.6   3.3e+03       3      32 ..     504     533 ..     502     535 .. 0.83
   6 ?   -2.7   0.0       7.6   9.7e+03      20      34 .]     861     875 ..     861     875 .. 0.86
   7 !   26.4   0.2   3.6e-09   4.6e-06       2      32 ..     926     956 ..     925     956 .. 0.97
   8 ?   -0.6   0.1       1.6   2.1e+03       3      22 ..     983    1002 ..     981    1006 .. 0.80

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.028
                 HHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   9 siylklgdyeeAkeyyekaleldpd 33 
                 ++  + g++ eA++  e+ +++d +
  EPX71965.1 143 RLFAQEGNFTEAQKIAEEIVRIDNN 167
                 678899****************986 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 1.6
                 HHHHHHHHTT-HHHHH CS
       TPR_8   6 nlgsiylklgdyeeAk 21 
                 +lg + +k gd+eeA 
  EPX71965.1 403 KLGIARIKIGDLEEAA 418
                 67888899******95 PP

  == domain 3  score: 5.7 bits;  conditional E-value: 0.016
                 HHHHHHHHHHTT-HHHHHHHH CS
       TPR_8   4 yynlgsiylklgdyeeAkeyy 24 
                 + n++++y++ ++++ A eyy
  EPX71965.1 436 LGNIAKTYMEVERLDLALEYY 456
                 679*****************9 PP

  == domain 4  score: 15.7 bits;  conditional E-value: 9.7e-06
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldpd 33 
                 ++++ +g++yl+l+++e A++++e  l  d d
  EPX71965.1 469 QLWFDMGLCYLELKEFEHAQQCMEAILLVDND 500
                 79**********************99988877 PP

  == domain 5  score: -1.2 bits;  conditional E-value: 2.6
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyekaleldp 32 
                 a+++l+ i + + + ++A +     +el++
  EPX71965.1 504 ALVKLAEINELQDNRDAALAIVTSIIELQK 533
                 7899999*9999*****9998888887776 PP

  == domain 6  score: -2.7 bits;  conditional E-value: 7.6
                 HHHHHHHHHHHHHH. CS
       TPR_8  20 Akeyyekaleldpdn 34 
                 A+ yy +a  ++p++
  EPX71965.1 861 AINYYSRAYVMNPNC 875
                 899**9999888886 PP

  == domain 7  score: 26.4 bits;  conditional E-value: 3.6e-09
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldp 32 
                 ea+ynl+++y+ lg  + A++yyek+lel+p
  EPX71965.1 926 EALYNLAKAYHFLGLEHHAVQYYEKVLELSP 956
                 79***************************98 PP

  == domain 8  score: -0.6 bits;  conditional E-value: 1.6
                  HHHHHHHHHHHTT-HHHHHH CS
       TPR_8    3 ayynlgsiylklgdyeeAke 22  
                  a ynl +iy++ g+++ A e
  EPX71965.1  983 AAYNLRLIYISSGNLNLAFE 1002
                  56666689*******99977 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.0   5.7e-05     0.073       4      44 .]     137     178 ..     134     178 .. 0.86
   2 ?    2.5   0.0      0.26   3.3e+02       3      26 ..     281     304 ..     279     309 .. 0.88
   3 ?   -0.1   0.0       1.8   2.3e+03       4      27 ..     327     350 ..     325     360 .. 0.88
   4 ?    6.3   0.0     0.016        21       2      43 ..     469     510 ..     468     511 .. 0.94
   5 ?    3.6   0.0      0.12   1.5e+02       2      41 ..     503     545 ..     502     546 .. 0.84
   6 ?   -0.4   0.0       2.3     3e+03       5      27 ..     705     727 ..     701     738 .. 0.82
   7 ?    6.3   0.0     0.016        21       3      41 ..     844     882 ..     842     885 .. 0.88
   8 ?    6.5   0.0     0.014        18       2      32 ..     926     956 ..     926     960 .. 0.95

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 5.7e-05
      TPR_14   4 llala.eallalGdpdeAiallrralalaPddaeawlllaql 44 
                 ll la +++++ G++ eA ++++++++ + +  +aw +l+++
  EPX71965.1 137 LLSLAnRLFAQEGNFTEAQKIAEEIVRIDNNVIAAWKMLGEC 178
                 566773456788***************************985 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.26
      TPR_14   3 allalaeallalGdpdeAiallrr 26 
                 +l+ lae++ + + p eA+++++ 
  EPX71965.1 281 LLKHLAEVYIRIRTPGEALNAFET 304
                 5778*****************985 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 1.8
      TPR_14   4 llalaeallalGdpdeAiallrra 27 
                 l ++ae+ll   ++  Ai+l +r 
  EPX71965.1 327 LNLYAELLLLDHQWSNAIQLINRG 350
                 56899***************9987 PP

  == domain 4  score: 6.3 bits;  conditional E-value: 0.016
      TPR_14   2 eallalaeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 +++ +++  +l+l +++ A ++ +++l  + d+  a+  la+
  EPX71965.1 469 QLWFDMGLCYLELKEFEHAQQCMEAILLVDNDNINALVKLAE 510
                 5899********************************999998 PP

  == domain 5  score: 3.6 bits;  conditional E-value: 0.12
      TPR_14   2 eallalaeallalGdpdeAiallrrala...laPddaeawlll 41 
                 +al +lae+ + +++ d+A+a+   +++   + P+++ a ++l
  EPX71965.1 503 NALVKLAEINELQDNRDAALAIVTSIIElqkATPENEKATMEL 545
                 68999*********************99444468888888776 PP

  == domain 6  score: -0.4 bits;  conditional E-value: 2.3
      TPR_14   5 lalaeallalGdpdeAiallrra 27 
                   +a  ++ +G  ++A ++l++ 
  EPX71965.1 705 VHYALQEAKSGSVKQAYEVLKAG 727
                 5688889999**********986 PP

  == domain 7  score: 6.3 bits;  conditional E-value: 0.016
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddaeawlll 41 
                 + l++++++++++ +  Ai+++ ra   +P+ + ++l l
  EPX71965.1 844 LFLLYGHIMARSRSWIPAINYYSRAYVMNPNCPMTNLSL 882
                 6799***********************999988877655 PP

  == domain 8  score: 6.5 bits;  conditional E-value: 0.014
      TPR_14   2 eallalaeallalGdpdeAiallrralalaP 32 
                 eal+ la+a+  lG    A+++++++l+l P
  EPX71965.1 926 EALYNLAKAYHFLGLEHHAVQYYEKVLELSP 956
                 68999***********************998 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       8.2   1.1e+04      11      22 ..     145     156 ..     144     165 .. 0.74
   2 ?    2.2   0.0      0.13   1.7e+02       2      16 ..     170     184 ..     169     185 .. 0.92
   3 ?   -1.1   0.1       1.5   1.9e+03      18      28 ..     224     234 ..     223     238 .. 0.80
   4 ?    2.6   0.0      0.11   1.4e+02       7      24 ..     404     421 ..     400     422 .. 0.91
   5 !    9.8   0.0   0.00057      0.73       3      24 ..     435     456 ..     433     457 .. 0.94
   6 !   11.9   0.1   0.00012      0.15       2      23 ..     469     490 ..     468     501 .. 0.87
   7 ?    2.6   0.0      0.11   1.4e+02      20      34 .]     861     875 ..     860     875 .. 0.94
   8 !   21.7   0.7   9.6e-08   0.00012       2      32 ..     926     956 ..     926     956 .. 0.97

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 8.2
                 HHHTT-HHHHHH CS
       TPR_1  11 yfklgkydeAle 22 
                 + + g++ eA +
  EPX71965.1 145 FAQEGNFTEAQK 156
                 568899999965 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.13
                 HHHHHHHHHHHHTT- CS
       TPR_1   2 kalynlGnayfklgk 16 
                  a++ lG ++++ g+
  EPX71965.1 170 AAWKMLGECHRQRGN 184
                 69**********997 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 1.5
                 HHHHHHHHHHH CS
       TPR_1  18 deAleyyekAL 28 
                 d+A  +y++A+
  EPX71965.1 224 DQADYCYSRAI 234
                 78889*****9 PP

  == domain 4  score: 2.6 bits;  conditional E-value: 0.11
                 HHHHHHHTT-HHHHHHHH CS
       TPR_1   7 lGnayfklgkydeAleyy 24 
                 lG a  k g+++eA  ++
  EPX71965.1 404 LGIARIKIGDLEEAAHHF 421
                 89999*********9998 PP

  == domain 5  score: 9.8 bits;  conditional E-value: 0.00057
                 HHHHHHHHHHHTT-HHHHHHHH CS
       TPR_1   3 alynlGnayfklgkydeAleyy 24 
                 +l n++ +y++ +++d Aleyy
  EPX71965.1 435 VLGNIAKTYMEVERLDLALEYY 456
                 689******************9 PP

  == domain 6  score: 11.9 bits;  conditional E-value: 0.00012
                 HHHHHHHHHHHHTT-HHHHHHH CS
       TPR_1   2 kalynlGnayfklgkydeAley 23 
                 + ++ +G++y++l++++ A ++
  EPX71965.1 469 QLWFDMGLCYLELKEFEHAQQC 490
                 579****************998 PP

  == domain 7  score: 2.6 bits;  conditional E-value: 0.11
                 HHHHHHHHHHHSTTH CS
       TPR_1  20 AleyyekALelnPnn 34 
                 A+ yy++A   nPn+
  EPX71965.1 861 AINYYSRAYVMNPNC 875
                 9************96 PP

  == domain 8  score: 21.7 bits;  conditional E-value: 9.6e-08
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHST CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALelnP 32 
                 +alynl+ ay+ lg    A++yyek+Lel P
  EPX71965.1 926 EALYNLAKAYHFLGLEHHAVQYYEKVLELSP 956
                 69***************************98 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   0.0   0.00026      0.33       3      40 ..     147     184 ..     145     186 .. 0.94
   2 ?   -0.7   0.0       1.6   2.1e+03      15      53 ..     269     307 ..     258     315 .. 0.64
   3 ?    5.8   0.0     0.015        19       8      57 ..     296     356 ..     293     362 .. 0.81
   4 ?   -2.7   0.0       7.2   9.2e+03      30      44 ..     403     417 ..     399     422 .. 0.72
   5 !   15.3   0.2   1.7e-05     0.021      23      58 ..     466     501 ..     443     511 .. 0.84
   6 ?    1.8   0.1      0.28   3.6e+02      21      56 ..     498     533 ..     497     541 .. 0.87
   7 ?    3.3   0.0     0.092   1.2e+02      10      42 ..     861     895 ..     861     896 .. 0.93
   8 ?   -0.3   0.1       1.2   1.5e+03      25      44 ..     925     944 ..     921     957 .. 0.62
   9 ?   -0.7   0.0       1.7   2.2e+03      26      44 ..     982    1000 ..     978    1007 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00026
      TPR_19   3 aegdyaeAlalleqalqedpknaearllLAeallalgq 40 
                 +eg+++eA+++ e++   d++  +a+  L e++ + g+
  EPX71965.1 147 QEGNFTEAQKIAEEIVRIDNNVIAAWKMLGECHRQRGN 184
                 89*******************************99998 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 1.6
      TPR_19  15 eqalqedpknaearllLAeallalgqldeAealLdalpe 53 
                 +q+l  +p +  ++  LAe+++    + eA ++ ++ ++
  EPX71965.1 269 RQLLPSSPFDVTLLKHLAEVYIRIRTPGEALNAFETSWA 307
                 555555666677777888888877777777766665554 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.015
      TPR_19   8 aeAlalleqalqedpk...........naearllLAeallalgqldeAealLdalpeedpd 57 
                  eAl+++e  ++++ +           ++ a+ l+Ae+ll   q+  A++l+++  ++++ 
  EPX71965.1 296 GEALNAFETSWAHYYQypvppvgkgvfDLPALNLYAELLLLDHQWSNAIQLINRGTRWFRG 356
                 6788888888877666666777777888889999*******************99888765 PP

  == domain 4  score: -2.7 bits;  conditional E-value: 7.2
      TPR_19  30 lLAeallalgqldeA 44 
                  L +a ++ g+l+eA
  EPX71965.1 403 KLGIARIKIGDLEEA 417
                 567777888888888 PP

  == domain 5  score: 15.3 bits;  conditional E-value: 1.7e-05
      TPR_19  23 knaearllLAeallalgqldeAealLdalpeedpdd 58 
                 +n  ++ ++  ++l+l++++ A+++++a+++ d d+
  EPX71965.1 466 QNIQLWFDMGLCYLELKEFEHAQQCMEAILLVDNDN 501
                 58889999*************************995 PP

  == domain 6  score: 1.8 bits;  conditional E-value: 0.28
      TPR_19  21 dpknaearllLAeallalgqldeAealLdalpeedp 56 
                 d++n +a+  LAe+   + + d+A a++  + e ++
  EPX71965.1 498 DNDNINALVKLAEINELQDNRDAALAIVTSIIELQK 533
                 67899999999****************999988766 PP

  == domain 7  score: 3.3 bits;  conditional E-value: 0.092
      TPR_19  10 Alalleqalqedpk..naearllLAeallalgqld 42 
                 A++++++a+  +p+  + ++ l+LA ++ a+ +l 
  EPX71965.1 861 AINYYSRAYVMNPNcpMTNLSLGLAYIHRAMQRLS 895
                 899************************99999886 PP

  == domain 8  score: -0.3 bits;  conditional E-value: 1.2
      TPR_19  25 aearllLAeallalgqldeA 44 
                 +ea+++LA+a+  lg    A
  EPX71965.1 925 QEALYNLAKAYHFLGLEHHA 944
                 67888888888766654444 PP

  == domain 9  score: -0.7 bits;  conditional E-value: 1.7
      TPR_19   26 earllLAeallalgqldeA 44  
                  ea+++L  +++++g+l+ A
  EPX71965.1  982 EAAYNLRLIYISSGNLNLA 1000
                  89999**********9977 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.5   0.1    0.0081        10      14      60 ..     146     184 ..     135     186 .. 0.74
   2 ?    3.9   0.0     0.051        66      27      71 ..     262     305 ..     260     311 .. 0.82
   3 ?   -1.6   0.0       2.6   3.4e+03       6      26 ..     327     347 ..     324     355 .. 0.57
   4 ?    0.3   0.1      0.66   8.5e+02      46      68 ..     401     421 ..     383     422 .. 0.63
   5 !   10.1   0.3    0.0006      0.77       2      69 ..     432     492 ..     431     495 .. 0.87
   6 !    9.0   0.6    0.0013       1.7       8      75 ..     473     532 ..     465     534 .. 0.76
   7 ?    4.2   0.1     0.041        53       4      40 ..     503     537 ..     500     545 .. 0.76
   8 !   11.4   0.2   0.00023       0.3      47      74 ..     927     954 ..     907     956 .. 0.88

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0081
      TPR_12  14 rrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgr 60 
                 ++ g+++eA+++ e+ ++i       ++  ++++   Lg+++r++g+
  EPX71965.1 146 AQEGNFTEAQKIAEEIVRID------NN--VIAAWKMLGECHRQRGN 184
                 56788888888888886555......34..88899999999988887 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.051
      TPR_12  27 ekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleea 71 
                 +ka e +r+ll p +p  +t l  L+++y +   + eAl+++e +
  EPX71965.1 262 RKATEGFRQLL-PSSPFDVTLLKHLAEVYIRIRTPGEALNAFETS 305
                 67777787776.789999999********9999999999999987 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 2.6
      TPR_12   6 lnnlaavlrrlgrydeAlell 26 
                 ln +a++l+   ++  A++l 
  EPX71965.1 327 LNLYAELLLLDHQWSNAIQLI 347
                 445666666666666665554 PP

  == domain 4  score: 0.3 bits;  conditional E-value: 0.66
      TPR_12  46 ttlrnLgrlyralgryeeAlell 68 
                 +t   Lg++  + g++eeA  ++
  EPX71965.1 401 RT--KLGIARIKIGDLEEAAHHF 421
                 44..4555555899999998876 PP

  == domain 5  score: 10.1 bits;  conditional E-value: 0.0006
      TPR_12   2 vatalnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelle 69 
                 ++ +l n+a ++++ +r+d Ale++        + +Gp     ++  +++g +y++l+++e A++  e
  EPX71965.1 432 TSVVLGNIAKTYMEVERLDLALEYYILL-----SGYGPAQ--NIQLWFDMGLCYLELKEFEHAQQCME 492
                 667899*******************999.....3468876..99*******************99766 PP

  == domain 6  score: 9.0 bits;  conditional E-value: 0.0013
      TPR_12   8 nlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealaia 75 
                  +++++++l++++ A+++ e+ l +       d    +++l  L+++ +++++ ++Al++ +  +++ 
  EPX71965.1 473 DMGLCYLELKEFEHAQQCMEAILLVD-----ND---NINALVKLAEINELQDNRDAALAIVTSIIELQ 532
                 68888888888666666666665555.....44...59********************9988877776 PP

  == domain 7  score: 4.2 bits;  conditional E-value: 0.041
      TPR_12   4 talnnlaavlrrlgrydeAlellekaleiarrllGpd 40 
                 +al++la++   + + d Al++    +e+++++  p+
  EPX71965.1 503 NALVKLAEINELQDNRDAALAIVTSIIELQKAT--PE 537
                 678888888888888888888888888888887..33 PP

  == domain 8  score: 11.4 bits;  conditional E-value: 0.00023
      TPR_12  47 tlrnLgrlyralgryeeAlelleealai 74 
                 +l+nL+ +y+ lg    A++++e++l++
  EPX71965.1 927 ALYNLAKAYHFLGLEHHAVQYYEKVLEL 954
                 7899999999999999999999999987 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.24     3e+02       4      44 ..     144     184 ..     140     189 .. 0.90
   2 ?    2.1   0.2      0.17   2.2e+02      12      61 ..     190     239 ..     185     245 .. 0.88
   3 ?   -2.4   0.0       4.2   5.4e+03      26      54 ..     276     304 ..     268     309 .. 0.82
   4 ?   -1.2   0.0       1.8   2.3e+03      31      51 ..     400     420 ..     395     422 .. 0.78
   5 !   16.7   0.4   4.7e-06     0.006       3      64 ..     441     503 ..     439     523 .. 0.86
   6 ?   -1.1   0.0       1.6   2.1e+03       8      29 ..     515     536 ..     508     538 .. 0.81
   7 ?    5.6   0.0     0.013        17       3      42 ..     850     889 ..     849     890 .. 0.94
   8 ?   -2.1   0.0       3.6   4.6e+03      33      61 ..     929     960 ..     926     973 .. 0.74

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.24
       TPR_9   4 iaireedweralavverllllaPddpeerrdRGlllaqlGc 44 
                 + ++e ++ +a +++e ++ ++ + +  +   G ++ q+G+
  EPX71965.1 144 LFAQEGNFTEAQKIAEEIVRIDNNVIAAWKMLGECHRQRGN 184
                 349999****************************9999996 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.17
       TPR_9  12 eralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapd 61 
                 e++l +      l P+d+e +   + l + l+ + +A  +  +++   p+
  EPX71965.1 190 EKCLIAWMAAAHLRPKDHEMWATCAHLSESLEFWDQADYCYSRAILAKPA 239
                 678888888999*************************9999999988775 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 4.2
       TPR_9  26 PddpeerrdRGlllaqlGclsaAladLea 54 
                 P d+ ++   + ++ +   + +Al+++e+
  EPX71965.1 276 PFDVTLLKHLAEVYIRIRTPGEALNAFET 304
                 5677788888999999999999*999997 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 1.8
       TPR_9  31 errdRGlllaqlGclsaAlad 51 
                 +r   G+++ + G+l++A+  
  EPX71965.1 400 LRTKLGIARIKIGDLEEAAHH 420
                 445679***********9975 PP

  == domain 5  score: 16.7 bits;  conditional E-value: 4.7e-06
       TPR_9   3 aiaireedweralavverllll.aPddpeerrdRGlllaqlGclsaAladLeaylalapdapd 64 
                  ++++ e+ + al+++ +l    + + +++++d Gl++ +l  ++ A +++ea l ++ d+  
  EPX71965.1 441 KTYMEVERLDLALEYYILLSGYgPAQNIQLWFDMGLCYLELKEFEHAQQCMEAILLVDNDNIN 503
                 579999999999999888877745678***************************988877655 PP

  == domain 6  score: -1.1 bits;  conditional E-value: 1.6
       TPR_9   8 eedweralavverllllaPddp 29 
                 +++ ++ala+v +++ l+  +p
  EPX71965.1 515 QDNRDAALAIVTSIIELQKATP 536
                 6788999****99999987766 PP

  == domain 7  score: 5.6 bits;  conditional E-value: 0.013
       TPR_9   3 aiaireedweralavverllllaPddpeerrdRGlllaql 42 
                 +i++r++ w  a+ ++ r  +++P+ p   +  Gl++ ++
  EPX71965.1 850 HIMARSRSWIPAINYYSRAYVMNPNCPMTNLSLGLAYIHR 889
                 57899********************************985 PP

  == domain 8  score: -2.1 bits;  conditional E-value: 3.6
       TPR_9  33 rdRGlllaqlGclsaAladLeaylalap...d 61 
                 +  + +++ lG  + A++  e  l+l+p    
  EPX71965.1 929 YNLAKAYHFLGLEHHAVQYYEKVLELSPlgtI 960
                 56677788888889999999999999995542 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       5.6   7.2e+03       7      20 ..     143     156 ..     138     163 .. 0.83
   2 ?   -1.6   0.0       2.8   3.6e+03       1      14 [.     171     184 ..     171     184 .. 0.84
   3 ?   -0.8   0.0       1.6   2.1e+03       5      22 ..     404     421 ..     402     422 .. 0.86
   4 !    6.7   0.1    0.0064       8.2       2      22 ..     436     456 ..     435     461 .. 0.94
   5 ?    1.0   0.0      0.43   5.5e+02       3      30 ..     472     499 ..     470     503 .. 0.83
   6 !   12.4   0.1    0.0001      0.13       1      32 [.     927     956 ..     927     962 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 5.6
       TPR_7   7 rlysrlGdyeeAie 20 
                 rl+ ++G++ eA +
  EPX71965.1 143 RLFAQEGNFTEAQK 156
                 678999****9976 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 2.8
       TPR_7   1 aLlnLarlysrlGd 14 
                 a+  L+++++++G+
  EPX71965.1 171 AWKMLGECHRQRGN 184
                 56789******996 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 1.6
       TPR_7   5 LarlysrlGdyeeAiely 22 
                 L+ ++ + Gd eeA+ ++
  EPX71965.1 404 LGIARIKIGDLEEAAHHF 421
                 8899999*******9765 PP

  == domain 4  score: 6.7 bits;  conditional E-value: 0.0064
       TPR_7   2 LlnLarlysrlGdyeeAiely 22 
                 L n+a +y ++ + + A+e+y
  EPX71965.1 436 LGNIAKTYMEVERLDLALEYY 456
                 89******************* PP

  == domain 5  score: 1.0 bits;  conditional E-value: 0.43
       TPR_7   3 lnLarlysrlGdyeeAielyeqsLaltk 30 
                 + ++ +y +l ++e A ++ e+ L +++
  EPX71965.1 472 FDMGLCYLELKEFEHAQQCMEAILLVDN 499
                 66999***************99766555 PP

  == domain 6  score: 12.4 bits;  conditional E-value: 0.0001
       TPR_7   1 aLlnLarlysrlGdyeeAielyeqsLaltkdp 32 
                 aL+nLa +y+ lG    A+++ye+  +l+ +p
  EPX71965.1 927 ALYNLAKAYHFLGLEHHAVQYYEK--VLELSP 956
                 79**********************..555555 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.0    0.0094        12       5      49 ..     143     184 ..     138     195 .. 0.87
   2 ?    1.9   0.0      0.28   3.5e+02      27      60 ..     272     306 ..     257     313 .. 0.78
   3 ?    0.5   0.0       0.8     1e+03       2      21 ..     403     422 ..     402     429 .. 0.85
   4 ?    3.7   0.0      0.08     1e+02       4      51 ..     440     485 ..     438     501 .. 0.87
   5 ?    1.1   0.0      0.51   6.5e+02       5      61 ..     476     529 ..     472     539 .. 0.82
   6 ?   -0.5   0.0       1.6     2e+03      16      47 ..     861     889 ..     861     898 .. 0.88
   7 ?   -1.1   0.2       2.4   3.1e+03      35      65 ..     926     956 ..     923     958 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0094
      TPR_16   5 raalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgr 49 
                 r++++ g++++A++ +e+ ++ d       +A+  lg+++ ++g+
  EPX71965.1 143 RLFAQEGNFTEAQKIAEEIVRID---NNVIAAWKMLGECHRQRGN 184
                 46778899***************...88999***********998 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.28
      TPR_16  27 dpssPdaaeAllllgdaalrqgrlaeAa.alyraa 60 
                  pssP+++  l +l++++ r     eA+ a+  ++
  EPX71965.1 272 LPSSPFDVTLLKHLAEVYIRIRTPGEALnAFETSW 306
                 4667****************999999998877666 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.8
      TPR_16   2 alaraalragdyddAaaale 21 
                 +l+ a+++ gd ++Aa+ + 
  EPX71965.1 403 KLGIARIKIGDLEEAAHHFA 422
                 688999999******99984 PP

  == domain 4  score: 3.7 bits;  conditional E-value: 0.08
      TPR_16   4 araalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrla 51 
                 a+ +++  + d A++++   l +++++ ++ + ++  g+++l++++++
  EPX71965.1 440 AKTYMEVERLDLALEYY--ILLSGYGPAQNIQLWFDMGLCYLELKEFE 485
                 88999************..6666668888**************99987 PP

  == domain 5  score: 1.1 bits;  conditional E-value: 0.51
      TPR_16   5 raalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraal 61 
                 + +l++++++ A+   ea l  d    d+  Al  l+++   q + ++A+a + + +
  EPX71965.1 476 LCYLELKEFEHAQQCMEAILLVD---NDNINALVKLAEINELQDNRDAALAIVTSII 529
                 55889999999999999999999...9999999999999999999999998887766 PP

  == domain 6  score: -0.5 bits;  conditional E-value: 1.6
      TPR_16  16 AaaaleaalkrdpssPdaaeAllllgdaalrq 47 
                 A++++ +a  ++   P ++   l lg+a+ ++
  EPX71965.1 861 AINYYSRAYVMN---PNCPMTNLSLGLAYIHR 889
                 8999********...99999999999999775 PP

  == domain 7  score: -1.1 bits;  conditional E-value: 2.4
      TPR_16  35 eAllllgdaalrqgrlaeAaalyraalraap 65 
                 eAl++l+ a+  +g    A+++y++ l+ +p
  EPX71965.1 926 EALYNLAKAYHFLGLEHHAVQYYEKVLELSP 956
                 7999999999988888888999998888777 PP

>> TPR_15  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.2   2.7e-06    0.0035     128     239 ..     188     304 ..     143     311 .. 0.84
   2 ?    0.8   0.1      0.18   2.3e+02     211     270 ..     465     524 ..     440     557 .. 0.79
   3 ?   -1.8   0.0       1.1   1.4e+03      17      37 ..     710     730 ..     704     737 .. 0.75
   4 ?   -1.0   0.0      0.64   8.2e+02     220     241 ..     931     952 ..     916     961 .. 0.76

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 2.7e-06
      TPR_15 128 riaellksleeeeaae.qsaafllaraelyrqegqtdaAlrdyreAlalapdsselraallWl.liDlgrraeLrellkawkara...esdasLwgpla 221
                 +i++ l   ++ + ++ ++  +++  a l +    +d+A  +y +A+ ++p++++l ++++++ +i  +   +Lr++ + +++       d +L + la
  EPX71965.1 188 NIEKCLIAWMAAAHLRpKDHEMWATCAHLSESLEFWDQADYCYSRAILAKPAKKSLTEEYIFNrSILNKDHGSLRKATEGFRQLLpssPFDVTLLKHLA 286
                 56666666677777777999******************************************8456556666799999999988766678999****** PP

      TPR_15 222 aAlllLgrpkkALeylrk 239
                   + ++  p +AL+ ++ 
  EPX71965.1 287 EVYIRIRTPGEALNAFET 304
                 *************98875 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.18
      TPR_15 211 esdasLwgplaaAlllLgrpkkALeylrkqakenrkdplwllaYADaleqagradeAwrl 270
                 +++ +Lw  ++  +l L++ + A + +++ +   ++++  l++ A++ e ++++d+A ++
  EPX71965.1 465 AQNIQLWFDMGLCYLELKEFEHAQQCMEAILLVDNDNINALVKLAEINELQDNRDAALAI 524
                 566677777888888888888888888887777888888888888888888888888765 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 1.1
      TPR_15  17 llykqgdvkkAlevLkeaaqk 37 
                   +k g vk+A+evLk+++++
  EPX71965.1 710 QEAKSGSVKQAYEVLKAGMAT 730
                 55678999*******887655 PP

  == domain 4  score: -1.0 bits;  conditional E-value: 0.64
      TPR_15 220 laaAlllLgrpkkALeylrkqa 241
                 la A+ +Lg ++ A +y++k +
  EPX71965.1 931 LAKAYHFLGLEHHAVQYYEKVL 952
                 6778888888888888887754 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.94   1.2e+03       8      28 ..     143     163 ..     137     164 .. 0.75
   2 ?   -1.4   0.0       3.9     5e+03       5      20 ..     403     418 ..     403     423 .. 0.86
   3 ?    2.7   0.1      0.19   2.4e+02       4      26 ..     472     494 ..     469     495 .. 0.83
   4 ?    2.1   0.0       0.3   3.8e+02       2      22 ..     504     524 ..     503     531 .. 0.86
   5 !   11.9   0.1   0.00023      0.29       1      31 [.     926     956 ..     926     957 .. 0.92

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.94
                 HHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   8 lsyrklgdtdkAlealerlik 28 
                 +++ + g+ ++A ++ e++++
  EPX71965.1 143 RLFAQEGNFTEAQKIAEEIVR 163
                 4555679*********99886 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 3.9
                 HHHHHHHHHHHHHHHH CS
       TPR_6   5 klalsyrklgdtdkAl 20 
                 kl+ +++k gd ++A 
  EPX71965.1 403 KLGIARIKIGDLEEAA 418
                 7999****88***996 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.19
                 HHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   4 yklalsyrklgdtdkAlealerl 26 
                 + ++l+y++l++ + A + +e +
  EPX71965.1 472 FDMGLCYLELKEFEHAQQCMEAI 494
                 779******99999888888765 PP

  == domain 4  score: 2.1 bits;  conditional E-value: 0.3
                 HHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   2 AlyklalsyrklgdtdkAlea 22 
                 Al kla+  + +++ d+Al++
  EPX71965.1 504 ALVKLAEINELQDNRDAALAI 524
                 99**********999999876 PP

  == domain 5  score: 11.9 bits;  conditional E-value: 0.00023
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-T CS
       TPR_6   1 dAlyklalsyrklgdtdkAlealerlikeYP 31 
                 +Aly+la++y  lg    A++++e++++  P
  EPX71965.1 926 EALYNLAKAYHFLGLEHHAVQYYEKVLELSP 956
                 7***********998889********99766 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.1    0.0036       4.6       6      31 ..     138     164 ..     135     166 .. 0.91
   2 ?    0.4   0.0      0.52   6.6e+02      14      32 ..     179     196 ..     177     196 .. 0.87
   3 ?   -3.2   0.0       7.1     9e+03       8      29 ..     285     306 ..     284     307 .. 0.78
   4 ?    2.9   0.0     0.083   1.1e+02       5      25 ..     436     456 ..     432     458 .. 0.91
   5 ?   10.5   0.3   0.00033      0.42       4      31 ..     927     954 ..     926     955 .. 0.94

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0036
      TPR_10   6 nNLanal.rqrgrydeAealleealai 31 
                   Lan+l  q g+++eA +++ee ++i
  EPX71965.1 138 LSLANRLfAQEGNFTEAQKIAEEIVRI 164
                 579****99**************9986 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.52
      TPR_10  14 qrgrydeAealleealair 32 
                 +r+r++e +++ e++l ++
  EPX71965.1 179 HRQRGNEKVNI-EKCLIAW 196
                 699********.***9765 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 7.1
      TPR_10   8 LanalrqrgrydeAealleeal 29 
                 La ++ + +   eA++ +e + 
  EPX71965.1 285 LAEVYIRIRTPGEALNAFETSW 306
                 7888888888889999999875 PP

  == domain 4  score: 2.9 bits;  conditional E-value: 0.083
      TPR_10   5 lnNLanalrqrgrydeAeall 25 
                 l N+a ++ ++ r+d A++++
  EPX71965.1 436 LGNIAKTYMEVERLDLALEYY 456
                 78*****************98 PP

  == domain 5  score: 10.5 bits;  conditional E-value: 0.00033
      TPR_10   4 slnNLanalrqrgrydeAealleealai 31 
                 +l NLa a++ +g  + A++++e++l++
  EPX71965.1 927 ALYNLAKAYHFLGLEHHAVQYYEKVLEL 954
                 789***********************86 PP

>> Ferritin  Ferritin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       5.1   6.6e+03      44      70 ..     150     176 ..     133     193 .. 0.65
   2 ?   11.7   0.5   0.00014      0.18      43     118 ..     482     558 ..     481     566 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 5.1
                 HHHHHHHHHHHHHHTTS....SHHHHH CS
    Ferritin  44 erehadklaerilalGgtpvltraele 70 
                   + a+k+ae i  ++ ++++  + l+
  EPX71965.1 150 NFTEAQKIAEEIVRIDNNVIAAWKMLG 176
                 445677777777777776666555555 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 0.00014
                 HHHHHHHHHHHHHHHTTS....SHHHHHHC-SSSS.CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-HHHHHHH CS
    Ferritin  43 eerehadklaerilalGgtpvltraeleeieapke.fgsveevleaalehekkvteslrelielaeeegDpatadfl 118
                  e eha++++e il  + + +   ++l+ei++ ++  + +++++  ++e++k++ e+ +  +el+  e+D +++ ++
  EPX71965.1 482 KEFEHAQQCMEAILLVDNDNINALVKLAEINELQDnRDAALAIVTSIIELQKATPENEKATMELTGRESDLGSQLLI 558
                 599***************9999999*******999555********************************9987665 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       5.4   6.9e+03      10      21 ..     223     234 ..     223     238 .. 0.83
   2 ?   -0.4   0.0      0.77   9.8e+02      23      39 ..     497     513 ..     467     516 .. 0.81
   3 ?    4.6   0.1      0.02        26      13      38 ..     861     886 ..     860     887 .. 0.97
   4 ?    3.5   0.4     0.044        57      29      41 ..     926     938 ..     924     939 .. 0.86
   5 ?   -0.8   0.0      0.98   1.2e+03      13      25 ..     944     956 ..     943     956 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 5.4
      TPR_11  10 yeeAieaYkkAl 21 
                 +++A  +Y++A+
  EPX71965.1 223 WDQADYCYSRAI 234
                 5778889***98 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.77
      TPR_11  23 ldPdnaeayynLGlayy 39 
                  d+dn +a+ +L+++  
  EPX71965.1 497 VDNDNINALVKLAEINE 513
                 69999999999998876 PP

  == domain 3  score: 4.6 bits;  conditional E-value: 0.02
      TPR_11  13 AieaYkkAlkldPdnaeayynLGlay 38 
                 Ai+ Y++A   +P+ +   + LGlay
  EPX71965.1 861 AINYYSRAYVMNPNCPMTNLSLGLAY 886
                 99***********************9 PP

  == domain 4  score: 3.5 bits;  conditional E-value: 0.044
      TPR_11  29 eayynLGlayykq 41 
                 ea+ynL++ay+ +
  EPX71965.1 926 EALYNLAKAYHFL 938
                 79********965 PP

  == domain 5  score: -0.8 bits;  conditional E-value: 0.98
      TPR_11  13 AieaYkkAlkldP 25 
                 A++ Y+k l+l+P
  EPX71965.1 944 AVQYYEKVLELSP 956
                 8999*******98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1010 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       701  (0.0390987); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.80u 0.27s 00:00:01.07 Elapsed: 00:00:00.49
# Mc/sec: 6185.78
//
Query:       EPX71966.1  [L=362]
Description: ribosomal protein subunit L2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.4e-50  170.7   0.4      3e-50  169.6   0.4    1.5  2  Ribosomal_L2_C  Ribosomal Proteins L2, C-terminal domain
    5.2e-27   93.6   0.1    3.3e-26   91.0   0.1    2.3  2  Ribosomal_L2    Ribosomal Proteins L2, RNA binding domain
  ------ inclusion threshold ------
      0.037   14.3   0.0      0.069   13.5   0.0    1.4  1  Ntox1           Putative RNase-like toxin, toxin_1


Domain annotation for each model (and alignments):
>> Ribosomal_L2_C  Ribosomal Proteins L2, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0         2   1.2e+04      16      31 ..     128     143 ..     122     144 .. 0.83
   2 !  169.6   0.4     5e-54     3e-50       1     126 []     206     332 ..     206     332 .. 0.97

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 2
                     -BBSE-SSTTS--SSS CS
  Ribosomal_L2_C  16 ivhnielkpgkggkla 31 
                      v  ie  pg+ g++a
      EPX71966.1 128 KVLRIEYDPGRSGHIA 143
                     68899999*9999986 PP

  == domain 2  score: 169.6 bits;  conditional E-value: 5e-54
                     SSSS-EBSSSS-TTB-BBSE-SSTTS--SSS-SSSB-EEBB-B..SSEEEEEETTS-EEEEETTSBEBES-BS-TTCTT----STTHHHHTTBS- CS
  Ribosomal_L2_C   1 kvGnvlplknipeGtivhnielkpgkggklarsaGtyaqvvake.gkkvtvklpSgevrkvssecrAtiGvvsngehkekklgkAgrkrwlgrrp 94 
                     k+Gn+ pl+ ip+Gt++h+i ++pg+++kl+rsaG++a+++a + +++++v+l+Sge rk+ +++ AtiG+vsn  +++++lgkAgr+rwlg+rp
      EPX71966.1 206 KPGNCFPLRLIPVGTVIHAIGVQPGQKAKLCRSAGSSARLIAFDdKNYAIVRLQSGEERKILATSFATIGTVSNIYWQHRQLGKAGRSRWLGIRP 300
                     68****************************************8559************************************************* PP

                     ---SSSS-TTTSSS--SSSS--SSSSTEETTC CS
  Ribosomal_L2_C  95 kvrGvamnpvdHphGGGeGktksrkapvspwg 126
                     +vrG+amn++dHphGGG Gk +++k ++sp+g
      EPX71966.1 301 TVRGTAMNACDHPHGGGGGKRIGNKPSQSPTG 332
                     ***********************999999987 PP

>> Ribosomal_L2  Ribosomal Proteins L2, RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.0   0.1   5.5e-30   3.3e-26       1      77 []      94     171 ..      94     171 .. 0.92
   2 ?   -0.8   0.0      0.25   1.5e+03      51      72 ..     254     275 ..     252     278 .. 0.84

  Alignments for each domain:
  == domain 1  score: 91.0 bits;  conditional E-value: 5.5e-30
                   TB-TT--BSSTT--------EE-B--S-.--SS--EEEEEEE--TT-SS-EEEEEETTTEEE..EEE--SS--SS-EE-- CS
  Ribosomal_L2   1 GrnnsgritvrhrggGhkkkyrlidfkr.nkekvkgkVveieyDpgRsApiAlvkyedgekr..yiiapeglkvGdtvvs 77 
                   Grn +gritvrh+ggGhk+++rl+dfkr +++    kV +ieyDpgRs++iAl++ +d ekr  yi+a++gl++Gdtv+s
    EPX71966.1  94 GRNDTGRITVRHIGGGHKQRIRLVDFKRiSPGPC--KVLRIEYDPGRSGHIALIESLDEEKRksYILACDGLQAGDTVES 171
                   9***************************666655..**********************655555**************85 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.25
                   EEEEETTTEEEEEE--SS--SS CS
  Ribosomal_L2  51 AlvkyedgekryiiapeglkvG 72 
                   A v +++ge+r i+a+    +G
    EPX71966.1 254 AIVRLQSGEERKILATSFATIG 275
                   789999********99877776 PP

>> Ntox1  Putative RNase-like toxin, toxin_1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.2e-05     0.069      11      49 ..     105     143 ..      97     176 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.2e-05
       Ntox1  11 padgghdvvvtpdGvekCsppPCPvlrveYkkelaadde 49 
                  ++ggh+  +    +++ sp PC vlr+eY    + + +
  EPX71966.1 105 HIGGGHKQRIRLVDFKRISPGPCKVLRIEYDPGRSGHIA 143
                 5799**************************866555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (362 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       244  (0.0136092); expected 358.6 (0.02)
Passed bias filter:                      212  (0.0118244); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 2453.67
//
Query:       EPX71967.1  [L=214]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.1e-20   71.1   0.0      9e-20   70.3   0.0    1.4  1  NCBP3     Nuclear cap-binding protein subunit 3


Domain annotation for each model (and alignments):
>> NCBP3  Nuclear cap-binding protein subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.3   0.0     5e-24     9e-20       1      57 [.      36      91 ..      36      92 .. 0.97

  Alignments for each domain:
  == domain 1  score: 70.3 bits;  conditional E-value: 5e-24
       NCBP3  1 lrpealhirGvdnLstedikaYvdeylnyeepfriEWIdDtsvnvvFkseedaakAL 57
                lr +alh++Gvd +s  +ik+++++y+ + +++ iEWI+D+++n+vF++e+ a++AL
  EPX71967.1 36 LRRTALHVSGVDFMSEAQIKEFISTYVLE-HECVIEWINDNECNLVFPDEDVARRAL 91
                6899**********************997.**************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       431  (0.0240393); expected 358.6 (0.02)
Passed bias filter:                      236  (0.013163); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 1388.62
//
Query:       EPX71968.1  [L=234]
Description: hypothetical protein SOCG_03902 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (234 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       413  (0.0230353); expected 358.6 (0.02)
Passed bias filter:                      200  (0.0111551); expected 358.6 (0.02)
Passed Vit filter:                         8  (0.000446204); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.44
# Mc/sec: 1611.38
//
Query:       EPX71969.1  [L=457]
Description: histone H4-like TAF Taf6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.2e-33  112.8   0.0    1.7e-32  111.6   0.0    1.7  1  TAF6_C         TAF6 C-terminal HEAT repeat domain
    1.3e-28   98.9   0.4    2.5e-28   98.1   0.4    1.5  1  TAF            TATA box binding protein associated factor (TA
     0.0053   17.1   0.2      0.012   16.0   0.2    1.6  1  Histone        Core histone H2A/H2B/H3/H4
  ------ inclusion threshold ------
      0.031   14.6   0.1      0.086   13.1   0.1    1.7  1  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a


Domain annotation for each model (and alignments):
>> TAF6_C  TAF6 C-terminal HEAT repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.6   0.0   3.8e-36   1.7e-32       1      90 []     283     372 ..     283     372 .. 0.99

  Alignments for each domain:
  == domain 1  score: 111.6 bits;  conditional E-value: 3.8e-36
      TAF6_C   1 vltcllakklgakseledhwaLRdfAAslLakilkkysssyktLkprvtrtllkvlldpkkslgtlyGallglaalGeeavrklvlpnlk 90 
                 +ltcl+ak+lg++++ +dh+aLRd+AA lL+ +++++++ y tLkprvtrt+lk++ld++k+++t+yGa+ gl+ +G+ea+r+l++pn+k
  EPX71969.1 283 ILTCLVAKRLGNDPHNHDHYALRDLAAYLLGIVCNRFGNVYYTLKPRVTRTVLKAFLDNTKPYTTHYGAINGLKTMGKEAIRVLLVPNIK 372
                 89**************************************************************************************86 PP

>> TAF  TATA box binding protein associated factor (TAF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.1   0.4   5.5e-32   2.5e-28       2      66 .]       4      68 ..       3      68 .. 0.98

  Alignments for each domain:
  == domain 1  score: 98.1 bits;  conditional E-value: 5.5e-32
                ----HHHHHHHHHHTT---B-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SSB-HHHHHHHH- CS
         TAF  2 silpkesvkviAeslGitnLsdeaaalLaedveyrlkeivqeaakfmrhskRqkLtvaDvdsALr 66
                ++++ es+k++Ae+lGi+nL deaa ++a+d+eyr+++++qea+kfm hskR++L+ aD++sALr
  EPX71969.1  4 TVWNIESIKDVAEMLGISNLGDEAASAIAMDLEYRIHQVIQEAMKFMVHSKRTVLSNADISSALR 68
                799*************************************************************9 PP

>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.2   2.6e-06     0.012      86     129 ..      25      68 ..      12      70 .. 0.93

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 2.6e-06
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTXSEEXHHHHHHHHH CS
     Histone  86 aeavlalqealEallvelfeeAnllakhaKRvTitpkDiqlArr 129
                  ea  a+++ lE+ + ++ +eA++ + h+KR  +   Di +A+r
  EPX71969.1  25 DEAASAIAMDLEYRIHQVIQEAMKFMVHSKRTVLSNADISSALR 68 
                 689999************************************99 PP

>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   1.9e-05     0.086      19      65 .]      21      67 ..      14      67 .. 0.92

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.9e-05
                   S-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHHH CS
  CBFD_NFYB_HMF 19 rkiakdAkeliaecveefieelaseAaeickkekrKtikaehiklAv 65
                    ++ ++A   ia  +e  i+++ +eA + + ++kr  ++ ++i++A+
     EPX71969.1 21 SNLGDEAASAIAMDLEYRIHQVIQEAMKFMVHSKRTVLSNADISSAL 67
                   5667899999999********************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (457 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       482  (0.0268838); expected 358.6 (0.02)
Passed bias filter:                      445  (0.0248201); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 3300.00
//
Query:       EPX71970.1  [L=568]
Description: retromer complex subunit Vps5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-66  223.9  11.9    2.9e-66  223.4  11.9    1.2  1  Vps5      Vps5 C terminal like
    1.4e-24   86.2   0.0    4.1e-24   84.7   0.0    1.8  1  PX        PX domain
  ------ inclusion threshold ------
       0.25   11.0   6.8       0.21   11.2   5.1    1.7  2  BAR       BAR domain
        0.3   11.4   2.6        6.5    7.1   0.1    2.7  2  DUF2524   Protein of unknown function (DUF2524)
       0.45   10.9   2.6        1.1    9.6   0.8    2.7  3  CLZ       C-terminal leucine zipper domain of cyclic nucleoti
       0.61   10.6   3.6        1.7    9.1   3.0    2.1  1  DUF16     Protein of unknown function DUF16


Domain annotation for each model (and alignments):
>> Vps5  Vps5 C terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  223.4  11.9   9.7e-70   2.9e-66       3     235 ..     335     568 .]     333     568 .] 0.99

  Alignments for each domain:
  == domain 1  score: 223.4 bits;  conditional E-value: 9.7e-70
        Vps5   3 slfkkltssisks.stkfeEqDewFedkkqeldslesqLkkLykaiellvsqrkelasataelakslesLaslelskslsralsqlaeveerikeller 100
                 +lf+++ts++++s  +k+ E+D+w+ + k +ld+le+qL+++y+ai   ++qr ++ s+++++++sl++L+ ++l +sls+ l++l++++ +++ ++er
  EPX71970.1 335 GLFDSFTSAFQTSsLPKYVEEDPWLAETKLSLDTLETQLRSMYHAILVCIDQRLQFLSSIHDFGESLANLSLVDLDPSLSSQLDSLSQIQIELQFSQER 433
                 68999******9999************************************************************************************ PP

        Vps5 101 qaeqdvltLgetideylrligsvksvfeqRvklwqkwqsaeqelskkkeqleKlekaaksqqdklqqlkkeveelerkvqeaekeFeeisetikkEler 199
                 +  qd+ltLg+t++ey+r i+s k+++++R+klwq+wqs+ q l++  +ql+K++k++k +q+ l+ l+ +ve+ ++k  +++++Fe+ ++ +k++l++
  EPX71970.1 434 KVAQDNLTLGVTVEEYIRNIESAKNAYASRQKLWQVWQSSLQSLARVDAQLDKCRKQSKFNQKSLPYLEGQVEKFRTKSSQLQQQFEKSTALLKHDLKQ 532
                 *************************************************************************************************** PP

        Vps5 200 FetervedfknvvekyLesaiesqkevielWetfls 235
                 F+++rv+d+k +ve++Lesaiesqke+i+ We+fl+
  EPX71970.1 533 FSRNRVDDLKASVETWLESAIESQKELIDRWESFLE 568
                 **********************************85 PP

>> PX  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.7   0.0   1.4e-27   4.1e-24       6     112 ..     200     308 ..     196     309 .. 0.95

  Alignments for each domain:
  == domain 1  score: 84.7 bits;  conditional E-value: 1.4e-27
                 EEEEEEEEE..TTSSEEEEEEEEEETTS...SSEEEEEEEHHHHHHHHHHHHHHHTTSTSTSSSTSGSSSSSCTTSHHHHHHHHHHHHHHHHHHHTSCH CS
          PX   6 vsvlerets..gskkhsyylyevelktg...akewtvkRrYsdFeeLhskLlrkfprvkiPplPkkvlfgsvrkkdeefiekrrkgLeeyLqrllnhpe 99 
                 ++v +++t     k+h++yl++ ++++g    +e tv+RrY+dF  L++ L +++p+++iPp P+k+++g+    d+e++e+rr++Le +L+++++hp 
  EPX71970.1 200 IDVHDPHTVteLAKSHTVYLVSSRMENGstqPSEVTVQRRYRDFDCLYQLLSNNYPGCIIPPPPEKQVVGR---LDDEVVEHRRSALEIMLRKISSHPL 295
                 6778888888899*********************************************************9...************************* PP

                 HHHSHHHHHHHHS CS
          PX 100 lrnsevlteFLev 112
                 lrn++ +  FL+v
  EPX71970.1 296 LRNDSFFENFLKV 308
                 ***********87 PP

>> BAR  BAR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.91   2.7e+03      99     130 ..     138     168 ..     122     172 .. 0.61
   2 ?   11.2   5.1   7.1e-05      0.21      92     228 ..     411     561 ..     362     566 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.91
         BAR  99 ekygeavkklaqteeelekrvetnfldplrel 130
                 e++++++k+ + ++e+l+ ++ t ++d+l ++
  EPX71970.1 138 ESMSAIQKE-SRQKENLDTTLDTGVMDTLSQS 168
                 444444444.4456778888888888888776 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 7.1e-05
         BAR  92 ssfgkalekygeavkklaqteeelekrvetnfldplrellekefkeiqkerkklehkrlDyDaakarlkklktkkskkakde..............eka 176
                  s+++ l+++++++ +l+  +e   ++ + ++  +++e++   ++  +++ + ++++   + ++ ++l ++ ++ +k +k++              ek 
  EPX71970.1 411 PSLSSQLDSLSQIQIELQFSQERKVAQDNLTLGVTVEEYI-RNIESAKNAYASRQKLWQVWQSSLQSLARVDAQLDKCRKQSkfnqkslpylegqvEKF 508
                 3468889999999999999999999999999999999999.99999999999999999999999999999999999988888899999*****99**** PP

         BAR 177 eeelrkAqqkfeesneelkaeLpnllalevefv.nqlqafveaqldfhkqaaq 228
                 +++ ++ qq+fe+s  +lk +L++++ ++v+ +  ++++ +e  ++ +k++ +
  EPX71970.1 509 RTKSSQLQQQFEKSTALLKHDLKQFSRNRVDDLkASVETWLESAIESQKELID 561
                 *********************************99999999999887777665 PP

>> DUF2524  Protein of unknown function (DUF2524)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.1    0.0022       6.5       2      38 ..     461     497 ..     460     506 .. 0.90
   2 ?    3.8   0.5     0.024        71       7      71 ..     501     563 ..     498     568 .] 0.85

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0022
     DUF2524   2 atrqsveellqkceqaieeaeeqfeeakrqehyndee 38 
                 a rq++ ++ q + q +  +  q+++ ++q ++n++ 
  EPX71970.1 461 ASRQKLWQVWQSSLQSLARVDAQLDKCRKQSKFNQKS 497
                 78********************************874 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.024
     DUF2524   7 veellqkceqaieeaeeqfeeakrqehyndeeYteAqlkLEeavneLeklaksandqQreqLeRa 71 
                 +e  ++k     ++ ++qfe+++   + + ++++   ++++++   +e+ ++sa + Q+e ++R 
  EPX71970.1 501 LEGQVEKFRTKSSQLQQQFEKSTALLKHDLKQFSR--NRVDDLKASVETWLESAIESQKELIDRW 563
                 56667788888888999999999999999999986..67899999***************99996 PP

>> CLZ  C-terminal leucine zipper domain of cyclic nucleotide-gated channels
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0         2   5.9e+03      39      50 ..     365     376 ..     356     380 .. 0.70
   2 ?    9.6   0.8   0.00038       1.1      20      67 ..     485     532 ..     478     536 .. 0.81
   3 ?   -2.1   0.0       1.8   5.3e+03      39      64 ..     537     562 ..     535     565 .. 0.75

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 2
         CLZ  39 sLeaLqtrlarL 50 
                 sL++L+t+l+ +
  EPX71970.1 365 SLDTLETQLRSM 376
                 677777777654 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00038
         CLZ  20 akagaeqkeleekverLessLeaLqtrlarLlaeyessqrkLkqRitk 67 
                  k +++ k  ++ +  Le+++e + t+  +L +++e+s + Lk+ +++
  EPX71970.1 485 DKCRKQSKFNQKSLPYLEGQVEKFRTKSSQLQQQFEKSTALLKHDLKQ 532
                 4455666666778899**************************998776 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 1.8
         CLZ  39 sLeaLqtrlarLlaeyessqrkLkqR 64 
                 +++ L+  ++  l+   +sq++L  R
  EPX71970.1 537 RVDDLKASVETWLESAIESQKELIDR 562
                 67888888888888888888888766 PP

>> DUF16  Protein of unknown function DUF16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   3.0   0.00058       1.7      16      95 ..     457     533 ..     445     564 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00058
                 XTTB-BHHHHHHB-..BHHHHHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHH.......HHHHHHHHHHHH CS
       DUF16  16 kteYVTrkqlnefkdsnkqrLkkieakvdklgeqinkleqkvekqgekikelkveqkaqgeelnkvdetleliletLqki 95 
                 k+ Y  r++l +  +s  q L +++a++dk  +q +  ++    ++ ++++ + +  + +++++k      l+ + L+++
  EPX71970.1 457 KNAYASRQKLWQVWQSSLQSLARVDAQLDKCRKQSKFNQKSLPYLEGQVEKFRTKSSQLQQQFEKST---ALLKHDLKQF 533
                 678999******999**************999999989999999*****999999998888776544...4444455444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (568 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       968  (0.0539907); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.62u 0.29s 00:00:00.90 Elapsed: 00:00:00.47
# Mc/sec: 3601.06
//
Query:       EPX71971.1  [L=554]
Description: xylulose kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      5e-28   98.2   0.0    9.8e-28   97.2   0.0    1.5  1  FGGY_C    FGGY family of carbohydrate kinases, C-terminal dom
    8.3e-16   58.3   0.0    2.4e-13   50.2   0.0    2.4  1  FGGY_N    FGGY family of carbohydrate kinases, N-terminal dom


Domain annotation for each model (and alignments):
>> FGGY_C  FGGY family of carbohydrate kinases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.2   0.0   1.1e-31   9.8e-28       3     198 .]     292     498 ..     290     498 .. 0.90

  Alignments for each domain:
  == domain 1  score: 97.2 bits;  conditional E-value: 1.1e-31
      FGGY_C   3 vslGTssflllvgtkpv..isehglltpvagedgkpeyalegsiavagslvawlldnlglreeirdagev..eeslaelaaaeavada........... 86 
                 +slGTs+++l+ ++++v  ++ h++ +p+      ++ ++ ++++++gsl    ++n  +r +i+++ +v  ++s++++++  + + +           
  EPX71971.1 292 LSLGTSTTALMATSNYVcsPDYHMFGHPTV-----TNDYMVMLCYKNGSL---AREN--IRNSINEKYQVpdKNSWDLFNKFTLTERPktgtlpdqkvg 380
                 79*********9999999***********9.....999************...5555..555555555558889*********9999999999998875 PP

      FGGY_C  87 ...ggvvfvpaf.sglrapywdpdargtitglssstt.lahiarAaleavalqlrailealekdsgkpldrlavdGGgskndllmqllAdilgvpVerp 180
                    +   ++pa+ +g ++++ +++  + it++s+s+t + + arA++e+++l +r+++  l  d  + ++r++v+GG+s+n++++q++ +ilg++V+r+
  EPX71971.1 381 lyyPLREIIPAVgPGVWRYNIRNSKLEPITETSESWTiPDDDARAIVESQFLDIRDRITPLLTD-VSRPQRVYVVGGASRNEAIVQMISEILGCDVYRL 478
                 5555555669999*********999999*********9***********************999.999******************************* PP

      FGGY_C 181 kt..aeatalGaAilAavaa 198
                 k+   +a+a+G A++Aa+a+
  EPX71971.1 479 KQgaSNACAIGGAVKAAYAM 498
                 *99899************96 PP

>> FGGY_N  FGGY family of carbohydrate kinases, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.2   0.0   2.7e-17   2.4e-13       1     244 [.       1     280 [.       1     281 [. 0.79

  Alignments for each domain:
  == domain 1  score: 50.2 bits;  conditional E-value: 2.7e-17
                 EEEEEEEESSEEEEEEEETTS-EEEEEEEE--EB-SST...T--EE-HHH.......HHHHHHHHHHHHHHHCT.-GCCEEEEEEEE-SS-EEEE.... CS
      FGGY_N   1 lilglDcGttstkaivldekgkvvasaqaelelsspke...gwaeqdpee.......iwqalaeairkvleqagisekqikaIgisgqreglvll.... 85 
                 + lglD++t+++k + ++ek ++v+   + +e ++p+    + + +d +e       +++al   +  + +   ++ ++i++I  +gq++ +v++    
  EPX71971.1   1 MFLGLDLSTQQLKGVTVNEKLDIVQEVVVDFEKDFPSYkttKGVYKDGHEvvapvpmWLDALDLLCVRLTKV--MDVSKIQGICGAGQQHAGVFWlqga 97 
                 689********************************9886564455565551111221555555555555554..5999************999984433 PP

                 .............ETTT.EESSE.EE-TT--TTHHHHHHHHH.TTCHCCHHHHHSS-SSTTSHHHHHHHHHHHSCCHHCCHCEEEEHHHHHHHHHCT.- CS
      FGGY_N  86 .............Dknd.kpLyn.ailwkdrrtaeiveklke.egnekklyektglvlstgftlsklkWlkenepevfekiekflliddyLiwrLtg.q 167
                                +  k Ly+    w+d  t+ +++++++  g++  l+ +tg+ ++  ft+  +k +++ +p+++ek+e ++l +++L+  L + +
  EPX71971.1  98 eqalgsletsstlQSQLeKYLYPrSPNWQDATTSRECREMEAvVGGAGILADITGSRAHLRFTGPQIKRFRRLHPDIYEKTERIGLASSFLMSVLLQrE 196
                 222222221111111112344442346***************999999***********************************************9988 PP

                 -EEEHHHHCTTTSEETTTTEE-HHHHHHTT--GG......GS-EE.E-TCCEEEEEECCCCCCTT.S-EEEEEEEEEHHHHHHH CS
      FGGY_N 168 fvtdvtnasesmlfnikklewdeellailgipee......lLPkl.vesseiigelkpelaaklGlkegvpvvggggDqqaaal 244
                    +++++ +++l++i+++ +++ ll+ ++ p +      +L ++ +++++  g + ++  +k G+ ++  + +++gD+ a++l
  EPX71971.1 197 APLEISDVCGMNLWDIRNERFEPRLLDDVAGPFKgsdlaqKLGPVeMNGAKHLGGIGSYFTKKYGFSPQCQILPITGDNPATLL 280
                 899***********************866554444677778888835677889**************************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (554 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       302  (0.0168442); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.29s 00:00:00.84 Elapsed: 00:00:00.46
# Mc/sec: 3656.75
//
Query:       EPX71972.1  [L=1538]
Description: brefeldin A efflux transporter Bfr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.5e-78  261.2  59.0    1.1e-41  142.6  20.7    3.0  3  ABC2_membrane  ABC-2 type transporter
    7.3e-35  120.5   0.0    2.6e-17   63.6   0.0    2.5  2  ABC_tran       ABC transporter
    2.6e-33  113.8  13.8    1.3e-27   95.5   0.1    3.4  2  PDR_CDR        CDR ABC transporter
    7.2e-10   39.4   0.1    2.1e-09   37.9   0.1    1.9  1  ABC_trans_N    ABC-transporter N-terminal
    8.3e-07   29.1   0.0    5.8e-05   23.1   0.0    2.3  2  RsgA_GTPase    RsgA GTPase
    9.3e-06   26.1   0.1     0.0011   19.4   0.1    2.4  2  AAA_16         AAA ATPase domain
    7.5e-05   22.1   0.1       0.41    9.9   0.0    2.4  2  Zeta_toxin     Zeta toxin
    0.00028   20.5   0.1     0.0022   17.6   0.0    2.2  2  AAA_25         AAA domain
     0.0012   18.7   0.1       0.52   10.1   0.0    2.7  2  AAA_21         AAA domain, putative AbiEii toxin, Type IV TA 
     0.0015   18.9   0.0      0.088   13.1   0.0    3.0  2  AAA_22         AAA domain
     0.0023   18.1   0.0        3.2    7.9   0.0    2.6  2  AAA_33         AAA domain
     0.0048   16.6   0.0       0.22   11.3   0.0    2.7  2  AAA_29         P-loop containing region of AAA domain
     0.0069   16.3   0.0       0.17   11.8   0.1    2.5  2  NACHT          NACHT domain
     0.0083   15.6   0.0       0.25   10.7   0.0    2.9  3  SMC_N          RecF/RecN/SMC N terminal domain
     0.0096   15.7   0.3       0.93    9.2   0.2    2.4  2  AAA_30         AAA domain
  ------ inclusion threshold ------
       0.02   15.4   0.0       0.46   11.0   0.0    2.6  2  AAA_18         AAA domain
      0.026   14.6   0.0       0.64   10.1   0.0    2.6  2  MMR_HSR1       50S ribosome-binding GTPase
      0.055   13.3   0.1       0.16   11.8   0.0    1.7  2  dNK            Deoxynucleoside kinase
      0.086   12.8   0.3       0.46   10.5   0.1    2.1  2  TsaE           Threonylcarbamoyl adenosine biosynthesis prote
       0.11   12.9   0.0        6.6    7.2   0.0    3.0  2  AAA            ATPase family associated with various cellular
       0.12   12.8   0.0       0.87   10.0   0.0    2.4  2  RNA_helicase   RNA helicase
       0.14   11.4   0.0        1.5    8.0   0.0    2.3  2  Septin         Septin
       0.24   11.9   1.9       0.27   11.7   0.1    1.9  1  AAA_23         AAA domain


Domain annotation for each model (and alignments):
>> ABC2_membrane  ABC-2 type transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.4  22.9   7.7e-41     6e-38       2     210 .]     535     744 ..     534     744 .. 0.96
   2 !  142.6  20.7   1.4e-44   1.1e-41       1     207 [.    1211    1423 ..    1211    1426 .. 0.96
   3 ?   -1.9   0.7       2.4   1.8e+03      34     113 ..    1502    1515 ..    1486    1531 .. 0.48

  Alignments for each domain:
  == domain 1  score: 130.4 bits;  conditional E-value: 7.7e-41
  ABC2_membrane   2 qikallkreflqrwrdpslgllwrliqplllalvfgtvfgnlg.nsedglnrpgllffsvlflafsaltsvapvferergvlerelvsplyslsay 96 
                    q++ +l r++++++ dp+++ l++ +  +++++++g++f+nl  +++d ++r g lff++lf+a+++l+++ ++++ +r++++++++s ly+++a 
     EPX71972.1 535 QLRYCLIRSWQRYINDPAYI-LAMAFAFMFQSFIIGSIFYNLRdSTNDMFTRGGTLFFAILFTALQSLSEI-ANMFAQRPIIAKHRASALYHPAAD 628
                    899*****************.99********************7788888*********************.999********************* PP

  ABC2_membrane  97 vlakvlvelpvsllqalifllivyflvgldls..rfflflllllltalaasslgllisalapsfedasqlaslvllpllllsGffipidsm.pkwl 189
                    v+++++v++p+  + +++f +i yfl++l+++   f+ f+++l+++a ++++++++++a++p++  as l+++ +l + +++G+ ip  ++   wl
     EPX71972.1 629 VISSLIVDIPFRSINVTVFAIILYFLTDLRRTagGFWTFYAFLFISATTMTTFFRALAAIMPNVASASALGGMGVLAIAIYTGYAIPNIDVgW-WL 723
                    ********************************9777999999*********************************************999955.** PP

  ABC2_membrane 190 qwiaylnPltyavealrsnlf 210
                    +wi+yl P+  ++ +l++n+f
     EPX71972.1 724 RWISYLDPVQFGFASLMINEF 744
                    ******************997 PP

  == domain 2  score: 142.6 bits;  conditional E-value: 1.4e-44
  ABC2_membrane    1 tqikallkreflqrwrdpslgllwrliqplllalvfgtvfgnlgnsedglnrpgllffsvlflafsaltsvapvferergvl.erelvsplysl 93  
                     tqi+ +l r+f+++wr psl+ +++++  ++ +l++g+ f+n+g  ++ +++  + +f+++ la+ ++ +++p f+  r v+ +re +s++ys+
     EPX71972.1 1211 TQIRFVLLRNFQSYWREPSLL-MSKMMLNIFAGLFIGFTFYNQGLGAQNMQNKLFAIFMATVLAVPLINGLQPKFIDLRNVFeVREKPSNIYSW 1303
                     699***************999.********************998899999999**************************************** PP

  ABC2_membrane   94 sayvlakvlvelpvsllqalifllivyflvgldls......rfflflllllltalaasslgllisalapsfedasqlaslvllpllllsGffip 181 
                      a+v++ +lve+p++l++++if+l+++++v ++        r ++++l+ +++ ++ s++g ++++ +p++++as++ sl +++++ + G++ p
     EPX71972.1 1304 VAFVISAILVEIPFNLIFGTIFFLCWFYPVKFYKHlehpsdRTGYAWLMYMIFQMYYSTFGQAVASACPNAQTASVVNSLAFTFIITFNGVMQP 1397
                     ******************************9999988767677*************************************************** PP

  ABC2_membrane  182 idsm.pkwlqwiaylnPltyavealrs 207 
                     i+++ + ++ w++ l P+ty++e+l++
     EPX71972.1 1398 INNLiK-FWHWMHSLTPFTYIIEGLLG 1423
                     ****66.*****************986 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 2.4
  ABC2_membrane   34 lvfgtvfgnlgnsedglnrpgllffsvlflafsaltsvapvferergvlerelvsplyslsayvlakvlvelpvsllqal 113 
                     +v+g+vf+                     ++f                                             ++l
     EPX71972.1 1502 IVIGYVFF---------------------NVF---------------------------------------------AVL 1515
                     22222222.....................111.............................................111 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.5   0.0   2.2e-17   1.7e-14       9     136 ..     199     350 ..     191     351 .. 0.92
   2 !   63.6   0.0   3.3e-20   2.6e-17       2     137 .]     914    1064 ..     913    1064 .. 0.94

  Alignments for each domain:
  == domain 1  score: 54.5 bits;  conditional E-value: 2.2e-17
                 ETTSEEEEEESTTSSHHHHHHHHTTSS--...SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH.....................HHHT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....................xxxx RF
    ABC_tran   9 kegekvaivGenGaGKStLlkllagllkp...teGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren.....................esde 83 
                 ++ge+v ++G+ GaG+St l+ +ag+++     e ++++dg +++e  ++++   + +  +++ +fp lt re+                     ++++
  EPX71972.1 199 NAGELVMVLGQPGAGCSTYLRSVAGETDHyndVETQLHYDGISSDE-MKKHYPGDVLYSGENDVHFPSLTTRETinfaarvrtphnrpcnisrkdYMNK 296
                 79************************99866677899999999999.99************************************99999888866666 PP

                 CHHHHHHHSTTGGTTCBGESTTS.GGS-HHHHHHHHHHHHHHHTSSEEEEESTT CS
                 xxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  84 eiekalsklglkelkdtvvkssp.ssLSgGqkqrvalarallkkpkllllDEpt 136
                   + +++++gl+++ +t+v+++  + +SgG+++rv + +a++ +p++ ++D+ t
  EPX71972.1 297 IRDLIATSFGLTHTYKTKVGNDFiRGVSGGERKRVTISEAFALRPTIACWDNST 350
                 68889999***********99999***************************987 PP

  == domain 2  score: 63.6 bits;  conditional E-value: 3.3e-20
                  EEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--..SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH................H CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................x RF
    ABC_tran    2 knvslklkegekvaivGenGaGKStLlkllagllkp..teGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren................e 80  
                  ++v+  +++g+++a++Ge+GaGK+tLl++la+ ++     G++l++g++l++     ++++ g+++q++ +  e+tvre                 e
  EPX71972.1  914 SEVNGFVRPGKLTALMGESGAGKTTLLNVLAQRVDTgvVTGNMLVNGHPLDS----TFQRRTGYVQQQDVHVAESTVREAlqfsaalrqpasvplsE 1006
                  6788889****************************99999***********9....9***************************9999999998887 PP

                  HHTCHHHHHHHSTTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEE.EESTTT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxx RF
    ABC_tran   81 sdeeiekalsklglkelkdtvvksspssLSgGqkqrvalarallkkpklll.lDEpta 137 
                  + e +e +++ l+++  ++ ++++ +s L   q++r  +   l+ kp lll lDEpt+
  EPX71972.1 1007 KFEYVESVIKLLEMEAYAEAIIGTPGSGLNVEQRKRATIGVELAAKPALLLfLDEPTS 1064
                  7788****************************************999986549***96 PP

>> PDR_CDR  CDR ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.5   0.1   1.7e-30   1.3e-27       1      90 [.     755     844 ..     755     846 .. 0.98
   2 !   26.3   1.4   6.3e-09   4.9e-06      30      77 ..    1481    1527 ..    1477    1536 .. 0.85

  Alignments for each domain:
  == domain 1  score: 95.5 bits;  conditional E-value: 1.7e-30
     PDR_CDR   1 vPsgpgyenvseenrvCavvGavpGqeyVsGddYlelsfgyssshlwrnfgiliaflifflalyllatelisaekskgevlvfkrgkapk 90 
                 +Psg +y+n+s+e++vC ++ a+pGq+yV+G++Yl +sf+y++ ++wrnf i+i++ +f ++++++a+e+++++  kge l+f+rg+ap 
  EPX71972.1 755 IPSGGEYDNISSEYKVCPITSAQPGQTYVDGSTYLYTSFNYKTRQIWRNFAIIIGYYAFLIFVNIVASEVLNFNDLKGEYLIFRRGHAPD 844
                 8**************************************************************************************996 PP

  == domain 2  score: 26.3 bits;  conditional E-value: 6.3e-09
     PDR_CDR   30 sGddYlelsfgyssshlwrnfgiliaflifflalyllatelisaeksk 77  
                  sGd++l  +fg + +h+wrnfgi+i++++f +++ ll++ +++  + k
  EPX71972.1 1481 SGDQFLL-QFGMKFDHRWRNFGIVIGYVFFNVFAVLLLFYIFRVMQIK 1527
                  7999998.9*********************999999998887766554 PP

>> ABC_trans_N  ABC-transporter N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.9   0.1   2.7e-12   2.1e-09      30      80 ..     105     171 ..      43     172 .. 0.70

  Alignments for each domain:
  == domain 1  score: 37.9 bits;  conditional E-value: 2.7e-12
  ABC_trans_N  30 d...............se.FdlekwlknlreridrdgikprklGVvFknLtVeGvgsgadyqpTvgn 80 
                  +                e Fdl+++l+  +++ +rdgi+ r++GV+ ++ +++G gsg  ++ T+ +
   EPX71972.1 105 SsvssvdhltgdpfalGEdFDLKRYLRGYKDALERDGIRSRTTGVCMRDTSIYGLGSGYEFLTTFID 171
                  0122222344455677555*********************************************987 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.086        67      98     124 ..     200     226 ..     174     244 .. 0.79
   2 !   23.1   0.0   7.5e-08   5.8e-05      74     125 ..     898     949 ..     878     976 .. 0.77

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.086
                  TTSEEEEECSTTSSHHHHHHHHCTT-- CS
  RsgA_GTPase  98 kdktsvlvGqSGvGKStLinallpele 124
                  ++++++++Gq G+G St + ++++e++
   EPX71972.1 200 AGELVMVLGQPGAGCSTYLRSVAGETD 226
                  348999***************999854 PP

  == domain 2  score: 23.1 bits;  conditional E-value: 7.5e-08
                  HTTSEEEE--TTTHTTHHHHHHHCTT.SEEEEECSTTSSHHHHHHHHCTT--- CS
  RsgA_GTPase  74 algyevllvsaktkegleelkellkd.ktsvlvGqSGvGKStLinallpelel 125
                  +l y++++ + ++++ l+e++  ++  k+++l+G+SG+GK+tL+n+l+++ ++
   EPX71972.1 898 NLCYDITV-KGEKRRLLSEVNGFVRPgKLTALMGESGAGKTTLLNVLAQRVDT 949
                  44444443.345577788888888877********************998554 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0     0.076        59      19      45 ..     196     222 ..     181     249 .. 0.81
   2 !   19.4   0.1   1.4e-06    0.0011      22     145 ..     923    1104 ..     907    1138 .. 0.57

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.076
      AAA_16  19 vrsgrpelvllsGesGvGKsslvrell 45 
                 + ++ +elv++ G++G G s+ +r+++
  EPX71972.1 196 ALANAGELVMVLGQPGAGCSTYLRSVA 222
                 4566679***************99987 PP

  == domain 2  score: 19.4 bits;  conditional E-value: 1.4e-06
      AAA_16   22 grpelvllsGesGvGKsslvrellralekdggif....lrgkcdql..esaipysalaqalareellrqlldeaesaeleawrekleeala...... 106 
                  g   l+ l GesG GK++l++ l++++ +  +++    ++g+  ++  ++ + y++  ++  +e+ +r+ l+ + +a++++++  l e ++      
  EPX71972.1  923 G--KLTALMGESGAGKTTLLNVLAQRVDTG-VVTgnmlVNGHPLDStfQRRTGYVQQQDVHVAESTVREALQFS-AALRQPASVPLSEKFEyvesvi 1015
                  3..7899*****************988877.3333333555555554444444422222222222222222221.2233333333333333555555 PP

      AAA_16  107 ..............................................avpelagaea...srllellkrll.allsrderplvlvlDdlq 145 
                                                                +++ l++++a    ++l++l+++  a l + ++p  +++D+++
  EPX71972.1 1016 kllemeayaeaiigtpgsglnveqrkratigvelaakpalllfldePTSGLDSQSAwsiVQFLRKLTDAGqAILCTIHQPSAVLFDQFD 1104
                  56656676666666666666666666666666666666676666666666666666555333444444333333333446666666666 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.0   0.00053      0.41      18      88 ..     203     279 ..     192     282 .. 0.83
   2 !    9.6   0.0   0.00064       0.5      18      89 ..     925     998 ..     915    1002 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00053
  Zeta_toxin  18 lillgGqpGAGKselaellkdele......rqgnvvrldpDdlRelhPeyeeilkadpkkaseltqkdaselvekll 88 
                 l+++ GqpGAG s+ ++ ++ e++      +q  +  ++ D++++ +P       +++ ++ +lt +++  ++++++
  EPX71972.1 203 LVMVLGQPGAGCSTYLRSVAGETDhyndveTQLHYDGISSDEMKKHYPGDVLYSGENDVHFPSLTTRETINFAARVR 279
                 78899*****************996555555555666999********96666668999999999999999888876 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00064
  Zeta_toxin  18 lillgGqpGAGKselaellkdele...rqgnvvrldpDdlRelhPeyeeilkadpkkaseltqkdaselvekllq 89 
                 l  l G +GAGK++l++ l+++++    +gn++ +++  l + + +  +  ++++ +++e t ++a ++++ l+q
  EPX71972.1 925 LTALMGESGAGKTTLLNVLAQRVDtgvVTGNML-VNGHPLDSTFQRRTGYVQQQDVHVAESTVREALQFSAALRQ 998
                 566889****************97554455554.56666666666666777777777777777777777777766 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.75   5.9e+02      29      53 ..     197     221 ..     192     225 .. 0.84
   2 !   17.6   0.0   2.9e-06    0.0022      24      61 ..     914     951 ..     901     997 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.75
      AAA_25  29 llpagelallaGapgtGKttlaldl 53 
                 l  agel+++ G+pg+G +t + ++
  EPX71972.1 197 LANAGELVMVLGQPGAGCSTYLRSV 221
                 6689*************99987665 PP

  == domain 2  score: 17.6 bits;  conditional E-value: 2.9e-06
      AAA_25  24 wlvkgllpagelallaGapgtGKttlaldlalavatGk 61 
                   v g+++ g+l++l+G +g+GKttl+  la  v tG 
  EPX71972.1 914 SEVNGFVRPGKLTALMGESGAGKTTLLNVLAQRVDTGV 951
                 44789**************************9998887 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0     0.014        11       1      23 [.     925     945 ..     925     975 .. 0.77
   2 !   10.1   0.0   0.00067      0.52     256     296 ..    1052    1091 ..    1044    1098 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.014
      AAA_21   1 lnvliGpNgsGKSnLLdaldlla 23 
                 l++l G  g+GK++LL  l  ++
  EPX71972.1 925 LTALMGESGAGKTTLLNVL--AQ 945
                 699*************999..34 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00067
      AAA_21  256 kkgsllliDEpEngLHPkllrrllellkelsrngaQviltT 296 
                  k++ ll++DEp +gL+ +   +++++l++l++  +Q il T
  EPX71972.1 1052 KPALLLFLDEPTSGLDSQSAWSIVQFLRKLTD-AGQAILCT 1091
                  44479**********************99999.88887766 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0      0.31   2.4e+02       7      37 ..     203     233 ..     198     306 .. 0.78
   2 !   13.1   0.0   0.00011     0.088       5      30 ..     923     948 ..     920     986 .. 0.88

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.31
      AAA_22   7 ilvvtGesGtGKTtllrrlleqldeeakaee 37 
                 +++v G++G+G +t lr ++ + d +++ e+
  EPX71972.1 203 LVMVLGQPGAGCSTYLRSVAGETDHYNDVET 233
                 68999*************9999887766655 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 0.00011
      AAA_22   5 agilvvtGesGtGKTtllrrlleqld 30 
                  ++++++GesG+GKTtll+ l+++ d
  EPX71972.1 923 GKLTALMGESGAGKTTLLNVLAQRVD 948
                 67899*************99998874 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0    0.0057       4.4       1      64 [.     203     276 ..     203     292 .. 0.73
   2 !    7.9   0.0    0.0041       3.2       2      31 ..     926     955 ..     925    1002 .. 0.75

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0057
      AAA_33   1 lvllvGlpGsGKstlaerllkklg..........avllssdtlrrrlfgtdqqsktdytrvldrlyqilnelar 64 
                 lv++ G pG+G st++++++ +++          +  +ssd++++ + g+   s ++  ++ + +++ + ++a+
  EPX71972.1 203 LVMVLGQPGAGCSTYLRSVAGETDhyndvetqlhYDGISSDEMKKHYPGDVLYSGENDVHFPSLTTRETINFAA 276
                 89*****************8888887777777779999999988888887777777777766665544444443 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0041
      AAA_33   2 vllvGlpGsGKstlaerllkklgavllssd 31 
                 + l G +G+GK+tl+  l+++ ++ +++ +
  EPX71972.1 926 TALMGESGAGKTTLLNVLAQRVDTGVVTGN 955
                 56889************9988776666555 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0      0.22   1.8e+02      15      39 ..     193     218 ..     183     222 .. 0.83
   2 !   11.3   0.0   0.00028      0.22      23      39 ..     923     940 ..     915     945 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.22
      AAA_29  15 htieidlkg.atlltGpsGsGKSTll 39 
                 h++ +  +g  +++ G+ G+G ST l
  EPX71972.1 193 HSHALANAGeLVMVLGQPGAGCSTYL 218
                 556666778899************76 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 0.00028
      AAA_29  23 g.atlltGpsGsGKSTll 39 
                 g  t l+G+sG+GK+Tll
  EPX71972.1 923 GkLTALMGESGAGKTTLL 940
                 44899************9 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0       0.3   2.3e+02       2      22 ..     203     223 ..     202     234 .. 0.88
   2 !   11.8   0.1   0.00022      0.17       3      31 ..     926     954 ..     924     977 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.3
                 CEEEEC-TTTCHHHHHHHHHH CS
       NACHT   2 lvilqGeaGsGKTtLlqklal 22 
                 lv++ G++G G +t l+++a 
  EPX71972.1 203 LVMVLGQPGAGCSTYLRSVAG 223
                 799**************9986 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 0.00022
                 EEEEC-TTTCHHHHHHHHHHHHCTS-SCC CS
       NACHT   3 vilqGeaGsGKTtLlqklalawaegklpq 31 
                  +l Ge+G GKTtLl  la+   +g   +
  EPX71972.1 926 TALMGESGAGKTTLLNVLAQRVDTGVVTG 954
                 6899***************9998887666 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       1.1   8.3e+02     114     154 ..     222     340 ..     173     386 .. 0.83
   2 ?    0.1   0.0      0.58   4.5e+02      25      42 ..     924     941 ..     912     944 .. 0.86
   3 !   10.7   0.0   0.00032      0.25     156     208 ..    1051    1103 ..    1047    1115 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 1.1
                 TTEEE-HHHHHHHHHCTT-STT............................................................................. CS
                 xxxxxxxxxxxxxxxxxxxxxx............................................................................. RF
       SMC_N 114 ngkevtkkevsellesagiske............................................................................. 135
                  g++ ++++v+ +l+  gis++                                                                             
  EPX71972.1 222 AGETDHYNDVETQLHYDGISSDemkkhypgdvlysgendvhfpslttretinfaarvrtphnrpcnisrkdymnkirdliatsfglthtyktkvgndfi 320
                 577778888888999999988888888888888888888888888888888888888888888888888899999999999999999999999999988 PP

                 .CS-HHHHHHHHHHHHHHHH CS
                 .xxxxxxxxxxxxxxxxxxx RF
       SMC_N 136 .lLSgGektLvalaLlfAiq 154
                    SgGe++ v ++  fA++
  EPX71972.1 321 rGVSGGERKRVTISEAFALR 340
                 88999999999999888875 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.58
                 SEEEEEESTTSSHHHHHH CS
                 xxxxxxxxxxxxxxxxxx RF
       SMC_N  25 sftaivGpNGSGKsnlld 42 
                 ++ta++G+ G+GK+ ll+
  EPX71972.1 924 KLTALMGESGAGKTTLLN 941
                 589***********9986 PP

  == domain 3  score: 10.7 bits;  conditional E-value: 0.00032
                  CS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC-SCE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  156 vkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemlekadkl 208 
                  +kpa l +lDe  + LD +    ++++l++ ++  Q i  ++++      d++
  EPX71972.1 1051 AKPALLLFLDEPTSGLDSQSAWSIVQFLRKLTDAGQAILCTIHQPSAVLFDQF 1103
                  68999************************************998776655555 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.054        42      12      39 ..     195     222 ..     191     234 .. 0.84
   2 !    9.2   0.2    0.0012      0.93      18      42 ..     923     947 ..     915     960 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.054
      AAA_30  12 alltsgdrvavltGpAGtGKttalkalr 39 
                 ++l++   ++++ G +G+G +t l++++
  EPX71972.1 195 HALANAGELVMVLGQPGAGCSTYLRSVA 222
                 566777779***************9986 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.0012
      AAA_30  18 drvavltGpAGtGKttalkalreaw 42 
                  ++++l G  G+GKtt+l++l++ +
  EPX71972.1 923 GKLTALMGESGAGKTTLLNVLAQRV 947
                 45899***************98755 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.67   5.3e+02       1      35 [.     204     239 ..     204     266 .. 0.71
   2 ?   11.0   0.0    0.0006      0.46       3      59 ..     928     981 ..     927    1025 .. 0.80

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.67
      AAA_18   1 IlltGtpGvGKttlakeLskrl.gfgvnlrdvaken 35 
                 +++ G pG+G +t  + ++ ++ ++ ++ +++++++
  EPX71972.1 204 VMVLGQPGAGCSTYLRSVAGETdHYNDVETQLHYDG 239
                 7899*************9999644433333334333 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.0006
      AAA_18   3 ltGtpGvGKttlakeLskrlgfgvnlrdvakenglllevdpealdeskrldedkldk 59 
                 l+G +G+GKttl + L++r   gv+ + ++ ++++l++ ++   +   + ++d+ ++
  EPX71972.1 928 LMGESGAGKTTLLNVLAQRVDTGVVTGNMLVNGHPLDSTFQR--RTGYVQQQDV-HV 981
                 7899**************976799999999999999999999..4444444443.33 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0      0.43   3.4e+02       2      23 ..     204     225 ..     203     236 .. 0.84
   2 ?   10.1   0.0   0.00082      0.64       3      22 ..     927     946 ..     925     983 .. 0.81

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.43
                 EEEEESTTSSHHHHHHHHHTST CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgek 23 
                 v+++G+p +G St +++  ge+
  EPX71972.1 204 VMVLGQPGAGCSTYLRSVAGET 225
                 899*************999874 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00082
                 EEEESTTSSHHHHHHHHHTS CS
    MMR_HSR1   3 aivGrpNvGKStLinaltge 22 
                 a++G + +GK+tL+n l ++
  EPX71972.1 927 ALMGESGAGKTTLLNVLAQR 946
                 89***************986 PP

>> dNK  Deoxynucleoside kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1       6.3   4.9e+03      73     107 ..      35      70 ..      26      94 .. 0.59
   2 ?   11.8   0.0   0.00021      0.16       5      72 ..     930     993 ..     927    1016 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 6.3
                 SSS-EEEEES-HHHHHHTHHHHHH.HTTSS-HHHHH CS
         dNK  73 atkqvvvleRsiysdryiFakala.ekgtlseeelk 107
                 +++q+++l+ s  s+   Fa+ +  + ++ +++e++
  EPX71972.1  35 KNTQNQLLDTSSISSSTTFAARNQnQTKSHTDNEYE 70 
                 567888888887777778877443033444444544 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 0.00021
                 ESTTSSHHHHHHHHHCCSTCEEEE-HHHHCCSSSSHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHCHH CS
         dNK   5 GnIgaGKstlvklLskklgvkvfeEpvdkwtnvqknlLekfYkdpsrwsfalqtyvllsrlkqqleal 72 
                 G  gaGK+tl+++L++++++ v++  +  +    +  L+  ++  +++  + +++v  s +++ l+++
  EPX71972.1 930 GESGAGKTTLLNVLAQRVDTGVVTGNMLVN----GHPLDSTFQRRTGYVQQQDVHVAESTVREALQFS 993
                 888***************998877654444....7899999999999999999999888888888776 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       2.4   1.8e+03      12      45 ..     195     227 ..     185     233 .. 0.76
   2 ?   10.5   0.1   0.00059      0.46      18      45 ..     920     949 ..     905     959 .. 0.78

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 2.4
                 HHHHHCHTEEEEEEESTTSSHHHHHHHHHHHTT- CS
        TsaE  12 kklakalgdvilLeGdLGaGKTtlvrglakalgv 45 
                 ++la+ +g++++  G+ GaG +t  r++a + ++
  EPX71972.1 195 HALAN-AGELVMVLGQPGAGCSTYLRSVAGETDH 227
                 44544.57889999************99987765 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00059
                 H..TEEEEEEESTTSSHHHHHHHHHHHTT- CS
        TsaE  18 l..gdvilLeGdLGaGKTtlvrglakalgv 45 
                 +  g++ +L G+ GaGKTtl   la+ ++ 
  EPX71972.1 920 VrpGKLTALMGESGAGKTTLLNVLAQRVDT 949
                 24567899****************998764 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0       0.3   2.3e+02       1      23 [.     204     226 ..     204     259 .. 0.81
   2 ?    7.2   0.0    0.0085       6.6       3      27 ..     928     952 ..     926     999 .. 0.79

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.3
                 EEEESSTTSSHHHHHHHHHHHHT CS
         AAA   1 vllyGppGtGKTllakavakelg 23 
                 v++ G pG G ++  ++va e++
  EPX71972.1 204 VMVLGQPGAGCSTYLRSVAGETD 226
                 6899****************974 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0085
                 EESSTTSSHHHHHHHHHHHHTHEEE CS
         AAA   3 lyGppGtGKTllakavakelgvefl 27 
                 l+G  G GKT+l + +a+ +++ ++
  EPX71972.1 928 LMGESGAGKTTLLNVLAQRVDTGVV 952
                 89****************9764443 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0       2.8   2.2e+03       1      25 [.     204     227 ..     204     252 .. 0.66
   2 ?   10.0   0.0    0.0011      0.87       3      54 ..     928     981 ..     926     995 .. 0.72

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 2.8
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkk 25 
                   +++ G++g G St+ +++a +   +
    EPX71972.1 204 VMVLGQPGAGCSTYLRSVAGETD-H 227
                   6799**********999665544.3 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.0011
  RNA_helicase   3 lyGpsgeGKStlakeLakallkklklkkkdsvys.rnpeddfw..dgYt.gqevvv 54 
                   l G+sg GK+tl + La+++ + +   + + ++  ++ +++f    gY  +q+v+v
    EPX71972.1 928 LMGESGAGKTTLLNVLAQRVDTGV--VTGNMLVNgHPLDSTFQrrTGYVqQQDVHV 981
                   78*****************99777..333455453555555546667875666665 PP

>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.47   3.6e+02       7      30 ..     204     227 ..     202     251 .. 0.75
   2 ?    8.0   0.0     0.002       1.5       9      59 ..     928     985 ..     924     992 .. 0.71

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.47
                 EEEEEBTTSSCCCCCCTTSSSS-- CS
      Septin   7 lmvvGesglGkttlintlfetdli 30 
                 +mv G+ g G +t+++++  +++ 
  EPX71972.1 204 VMVLGQPGAGCSTYLRSVAGETDH 227
                 8***************99865443 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.002
                 EEEBTTSSCCCCCCTTSSSS----.......--------------S-EEEEEEEEETT CS
      Septin   9 vvGesglGkttlintlfetdliee.......ekleeasekkkktveikkkkvvieedg 59 
                 ++Gesg Gkttl+n l ++ ++         + ++  s  +++t  +++++v + e  
  EPX71972.1 928 LMGESGAGKTTLLNVLAQRVDTGVvtgnmlvNGHPLDSTFQRRTGYVQQQDVHVAEST 985
                 57**************998887666666666555555666666666666666666655 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   0.00034      0.27      20      39 ..     924     943 ..     918     961 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00034
      AAA_23  20 gltlItGpNGaGKTTildAi 39 
                 +lt++ G+ GaGKTT+l+ +
  EPX71972.1 924 KLTALMGESGAGKTTLLNVL 943
                 69***************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1538 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1123  (0.062636); expected 358.6 (0.02)
Passed bias filter:                      625  (0.0348597); expected 358.6 (0.02)
Passed Vit filter:                        97  (0.00541023); expected 17.9 (0.001)
Passed Fwd filter:                        25  (0.00139439); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              23  [number of targets reported over threshold]
# CPU time: 1.11u 0.36s 00:00:01.47 Elapsed: 00:00:00.49
# Mc/sec: 9530.06
//
Query:       EPX71973.1  [L=857]
Description: WEE protein kinase Wee1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.3e-50  170.5   0.0    5.9e-50  170.1   0.0    1.2  1  Pkinase          Protein kinase domain
    7.1e-32  110.7   0.0    9.7e-32  110.3   0.0    1.2  1  Pkinase_Tyr      Protein tyrosine kinase
  ------ inclusion threshold ------
        0.2   10.6   0.0        0.3   10.0   0.0    1.1  1  Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  170.1   0.0   9.9e-54   5.9e-50       2     262 ..     548     818 ..     547     820 .. 0.86

  Alignments for each domain:
  == domain 1  score: 170.1 bits;  conditional E-value: 9.9e-54
                 EEEEEEEEESSEEEEEEEE.TTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS.CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS...- CS
     Pkinase   2 ekleklGeGsfGkVykave.ketgkivAvKkikkekakkkkekkvlrEikilkklk.hpnivrlyevfeekdelylvleyveggeladllerkgs...l 95 
                 ++++ lG+G+f++V+++ +  e++ ++AvKk+k++    k+++++l+E++i + lk h++iv+l++++e + +l++ +e++e+g+l+++le++g+   l
  EPX71973.1 548 RNITVLGRGEFSEVFQVEDpLERSLKYAVKKLKVKYSGPKERSRLLHEVSIQRDLKgHDHIVELIDSWEFNGYLFMQVELCENGSLDRFLEEQGQlsrL 646
                 56789************983577889*****************************************************************55542237 PP

                 -HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS CS
     Pkinase  96 seeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelessskltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgk 194
                 +e ++ ki+ +++ gl+y+H+k+ +H DlKp+N++i  +g lKi+DFG+a+ +       ++ g+ eY+APE+l+++ y+k++D++slG++++e    +
  EPX71973.1 647 DEFRVWKILVELALGLQYIHCKNYVHLDLKPANVMITFEGTLKIGDFGMASVWPVPR-GLEREGDCEYIAPEILSKHLYDKPADIFSLGITVFEAA-AN 743
                 889999***********************************************9988.78899********************************5.55 PP

                 -STTTSSHHHHHHHHHHT..HHHHHHHCT.SHH...HHHTTS.......-HHHHHHHHHHT-SSGCCSTTHHHHHTSG CS
     Pkinase 195 ppfsgekgkekvekeldq..lekilkilg.etkeklpeasei.......seeakdllkkllkkdpkkRltaeellqhp 262
                  +++ ++g++  +++l+   l    ++   et+ ++   ++i       +  + ++++++l+ +p++R+t++++l+ p
  EPX71973.1 744 IVLP-DNGQS--WQKLRSgdLSDAPRLSStETSSNTSASRDIpmnsiigQGGLDRVVQWMLAPEPRNRPTIDQILATP 818
                 6666.35554..4444443366666666543333333333447777888888999*******************9876 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.3   0.0   1.6e-35   9.7e-32       4     212 ..     550     770 ..     547     817 .. 0.81

  Alignments for each domain:
  == domain 1  score: 110.3 bits;  conditional E-value: 1.6e-35
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSS.HHHHHHHHHHHHHHHTS.-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHT.CTT CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkeeat.eeekeelleeakimkkl.khpnivkllgvctkeepllivteyvkgGdLlkfLrkk.eke 98 
                   + lG+G+f++V++ +      ++++k avK+lk +++  +e+++ll+e++i ++l  h++iv+l+     ++ l++ +e++++G+L+ fL+++ + +
   EPX71973.1 550 ITVLGRGEFSEVFQVEDP---LERSLKYAVKKLKVKYSgPKERSRLLHEVSIQRDLkGHDHIVELIDSWEFNGYLFMQVELCENGSLDRFLEEQgQLS 644
                  578**********98766...8899********97766156799************99**********************************994557 PP

                  TSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHHH CS
  Pkinase_Tyr  99 kltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfGvllw 196
                  +l+  ++ ++ +++A G++y++ k++vH dl   Nv+++ + + ki+DfG+a+         +  e++  ++++apE+l+++ + + +D++s G++++
   EPX71973.1 645 RLDEFRVWKILVELALGLQYIHCKNYVHLDLKPANVMITFEGTLKIGDFGMASVW----PVPRGLEREGDCEYIAPEILSKHLYDKPADIFSLGITVF 738
                  78888899*********************************************99....566677778899*************************** PP

                  HHHTTSSGT................TTTSHHH CS
  Pkinase_Tyr 197 Eiftlgesp................ypglkne 212
                  E + +   p                 p+l+++
   EPX71973.1 739 EAAANIVLPdngqswqklrsgdlsdAPRLSST 770
                  *9998877744444444444444444444444 PP

>> Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0     5e-05       0.3     295     313 ..     665     684 ..     644     691 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 5e-05
  Pox_ser-thr_kin 295 pdcenflhvDlkPdniLi.f 313
                        c+n++h+DlkP n++i f
       EPX71973.1 665 IHCKNYVHLDLKPANVMItF 684
                      37**************9834 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (857 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       575  (0.0320709); expected 358.6 (0.02)
Passed bias filter:                      255  (0.0142228); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.68u 0.32s 00:00:01.00 Elapsed: 00:00:00.49
# Mc/sec: 5221.89
//
Query:       EPX71974.1  [L=169]
Description: ribosomal protein subunit S18 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.2e-19   67.6   0.0    1.4e-18   66.9   0.0    1.3  1  Ribosomal_S18  Ribosomal protein S18


Domain annotation for each model (and alignments):
>> Ribosomal_S18  Ribosomal protein S18
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.9   0.0   7.7e-23   1.4e-18       7      52 .]     111     156 ..     104     156 .. 0.96

  Alignments for each domain:
  == domain 1  score: 66.9 bits;  conditional E-value: 7.7e-23
  Ribosomal_S18   7 YkdvelLsqFiterGkIlprriTGlcakhQrklakaIkrARhlaLL 52 
                    +k++ +Ls+Fite G+I+pr  TGl+ak+Qr +++aI+rAR+++ L
     EPX71974.1 111 WKNPVVLSNFITELGRIKPRADTGLSAKNQRLVSRAIRRARAVGVL 156
                    9******************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       256  (0.0142785); expected 358.6 (0.02)
Passed bias filter:                      203  (0.0113224); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1235.07
//
Query:       EPX71975.1  [L=321]
Description: phosphomethylpyrimidine kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.5e-58  196.9   0.0    4.4e-58  196.5   0.0    1.1  1  Phos_pyr_kin  Phosphomethylpyrimidine kinase
  ------ inclusion threshold ------
      0.015   14.7   0.0      0.034   13.5   0.0    1.5  1  HK            Hydroxyethylthiazole kinase family
       0.04   13.9   0.0       0.11   12.5   0.0    1.7  1  Diphtheria_T  Diphtheria toxin, T domain


Domain annotation for each model (and alignments):
>> Phos_pyr_kin  Phosphomethylpyrimidine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  196.5   0.0   7.4e-62   4.4e-58       1     231 [.      16     267 ..      16     278 .. 0.94

  Alignments for each domain:
  == domain 1  score: 196.5 bits;  conditional E-value: 7.4e-62
                   ETTSSSHHHHHHHHHHHTTEEEEEEEEEEEEEETTCEEEEEE--HHHHHHHHHHHHHTS--SEEEE-S--SHHHHHHHHHHHHHTTS.SEEEE---S CS
  Phos_pyr_kin   1 DssGGAGiqADlktfsalgvygmsvitaltaqntkgvkevhplpaelveaqleavledvkvdavKiGmlasaeiievvaeklkkykv.pvVlDPVmv 96 
                   D+sG AGiqADlk+++ +gvygmsv+talt qn++g+++++ + + l+e+ql+a+l+d+++d vKiGml + + +  +ae+l+++++ ++V+D V++
    EPX71975.1  16 DCSGSAGIQADLKVMQIHGVYGMSVLTALTSQNSRGIDGIYSVHPVLIERQLDACLSDINCDTVKIGMLPDFKSVVRIAECLQRHRMkNIVMDSVVI 112
                   9*********************************************************************************999999********* PP

                   SCTSSSBSSHHHHHHHHHHTGGG-SEEE-BHHHHHHHHT.......---SSHHHHHHHHHHHHHTT-SEEEEEEGGS-S...........SSEEEEE CS
  Phos_pyr_kin  97 aksgselleeeavealkeeLlplatvitPNlpEaeaLlg.......ekikteedmkeaakkllklgakaVlikGghleg...........eeavvtd 175
                   ++sg+ + e +a++a  + L+p + v   N+ Ea +L++        +++t+ed+k+  + ++k g + +++ G h+             +++ ++d
    EPX71975.1 113 SSSGQIMCEGTAISATIKYLFPYVLVYSSNIMEAYVLVQrvlghcpFSLRTLEDIKNLLRIIHKAGPRFIVLNGHHVAYndnfeiissptTDSFTVD 209
                   **************************************977766655667**************************97689********9888889* PP

                   EEETSSEEEEEEEE-..---S--BTHHHHHHHHHHHHHHCTSSHHHHHHHHHHHHHHH CS
  Phos_pyr_kin 176 vlydgeeveeleaer..ietknthGtGCtlssaiaaelakgesleeAvkkAkeyvtea 231
                   +++dg++++ +++++    +k+ hGt+C++ +aia+++a g+++ eA+++A++ +++a
    EPX71975.1 210 LIFDGDNFYVFQKPYdlRYSKTVHGTSCSMTAAIASNIALGKRPLEAIQEARQSIERA 267
                   ***********9985324569********************************99987 PP

>> HK  Hydroxyethylthiazole kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   5.6e-06     0.034     160     222 ..     207     271 ..     196     286 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 5.6e-06
                 SSEEEEESSEEEEEE-S-G..GGGGSTTHHHHHHHHHHHHHTTBSSHHHHHHHHHHHHHHHH.HH CS
          HK 160 evDvvsdgkkvyklknGte..llgkitasGCllgsvvaaflavkkdkllaaveavllykvAgkea 222
                  vD++ dg + y+ +   +  +   + ++ C++++++a+ +a+ k +l+a+ ea  + + A+   
  EPX71975.1 207 TVDLIFDGDNFYVFQKPYDlrYSKTVHGTSCSMTAAIASNIALGKRPLEAIQEARQSIERASLSI 271
                 58999*****99999988722467899***********************999999999998444 PP

>> Diphtheria_T  Diphtheria toxin, T domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.9e-05      0.11      63     138 ..      40     114 ..      33     127 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.9e-05
                   HHHHHTSS-GGGSHHHHHHHHHHHHHH--HHHHT-HHHHHHHHCT-S-CHHHHTEETTEE---SHHHHHHHHHHHH CS
  Diphtheria_T  63 elktvtgtnpvfaganyaawavnvaqvidsetadnlekttaalsilpgigsvmgiadgavhhnteeivaqsialss 138
                    l ++t  n       y+   v + + +d+  +d ++  t  + +lp   sv+ ia+    h  ++iv +s+ +ss
    EPX71975.1  40 VLTALTSQNSRGIDGIYSVHPVLIERQLDACLSD-INCDTVKIGMLPDFKSVVRIAECLQRHRMKNIVMDSVVISS 114
                   5666666676666677888888888888887766.6778899*******************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       611  (0.0340789); expected 358.6 (0.02)
Passed bias filter:                      505  (0.0281667); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.47
# Mc/sec: 2060.20
//
Query:       EPX71976.1  [L=387]
Description: translation release factor eRF1 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-44  150.5   0.1    3.7e-44  149.9   0.1    1.4  1  eRF1_1    eRF1 domain 1
    4.1e-31  108.1   0.1    6.2e-31  107.5   0.1    1.3  1  eRF1_2    eRF1 domain 2
    5.4e-25   88.1   0.0    1.2e-24   86.9   0.0    1.6  1  eRF1_3    eRF1 domain 3


Domain annotation for each model (and alignments):
>> eRF1_1  eRF1 domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.9   0.1   6.1e-48   3.7e-44       1     129 []       1     129 [.       1     129 [. 0.99

  Alignments for each domain:
  == domain 1  score: 149.9 bits;  conditional E-value: 6.1e-48
                 HEEEEECTBTTSCCEEEEEE-SCHHHHHHHHHCHTTHEEEEEEEECHHH.......--CEEEEEEEEEEEEEEECTTSSEEEEEEEEEEGGGG--TTSE CS
      eRF1_1   1 mkllkrdlekdgsgsvtLipeddedlwhlynliapgdsvrastvrkvqresstgsreservklkLtikvekvdfdkdagvlrisGkvieenehvklgaf 99 
                 m+l+++++ek gsg +t++pe++ed+whlyn+++ gd+++astvr+v +  +tg+++++r k++L++ +e +dfd++a+ l+i+Gk++e  + v+lg++
  EPX71976.1   1 MRLVQKNVEKTGSGEITMYPEEPEDMWHLYNILQIGDQLKASTVRRVVKVGATGTTSNSREKMTLKVLIEATDFDTKAAELHIKGKTTEYHPLVRLGSY 99 
                 9************************************************************************************************** PP

                 EEEEE-TTSEEEEEECEESHHHHHHHHHHC CS
      eRF1_1 100 htldlelkrpftiikeewdsfalerLkeal 129
                 htldlel+r+ft++k+ewdsfal+r++ a+
  EPX71976.1 100 HTLDLELHRNFTLYKNEWDSFALDRVDAAC 129
                 **************************9886 PP

>> eRF1_2  eRF1 domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.5   0.1     1e-34   6.2e-31       2     133 .]     137     268 ..     136     268 .. 0.96

  Alignments for each domain:
  == domain 1  score: 107.5 bits;  conditional E-value: 1e-34
                 EEEEEEETTEEEEEEEESSCEEEEEEEE------BSTTBSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHTTTESEEEEEESSTHHHHHHHHHHHHH CS
      eRF1_2   2 vglivldegeAtigllkgsrtevlkkievsvPkKhkrGgqsarrfeRlreekleeflkkvaeaankafllvdkdklkgiilagpgfvkeefldkdllda 100
                 +g++vl+eg A+++l+++++t ++++i++++P+K++ G++sa+      ++ +++f++ v++a++++   +d++klk+iila+pgfv++ ++d+++ +a
  EPX71976.1 137 IGAVVLEEGIANVCLITDYMTIMRQRINQTIPRKRR-GDSSAY------QKGINKFYDTVFQAISTE---LDFEKLKVIILASPGFVAKGLYDYIMDMA 225
                 89*********************************5.*****9......7*****************...8**************************** PP

                 HHHT........CCEEEEE-S-TSCHHHHHHHHC..CHHHHCC CS
      eRF1_2 101 elkk........kviklvdvsyggesglnevlek..aaevlkd 133
                 ++ +        +++ ++++s+g+ ++lnevl+   ++++l+d
  EPX71976.1 226 VKLDlkhvfkakEKFLILHSSTGHIHSLNEVLKSsvVESSLAD 268
                 *999999****99********************9988888876 PP

>> eRF1_3  eRF1 domain 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.9   0.0     2e-28   1.2e-24       1     113 []     271     370 ..     271     370 .. 0.98

  Alignments for each domain:
  == domain 1  score: 86.9 bits;  conditional E-value: 2e-28
                 HHHHHHHHHHHHHHHHCTCSSEEESHHHHHHHHHTT-EEEEEEEHCHHTSSSH.HHHHS-HHH-HHHHHHHHHHHHHHHHHTT-EEEEE-TTSHHHHHH CS
      eRF1_3   1 liqekklleefleelakdtgkavYGveevlkalemgAvetLLvseelersrdt.lkekvketgeelelvelieelvenveesgakveiisseseeGeql 98 
                 +iqe+++l++f++ ++ d+++a+YG ++v+ka+e+gA+ +LL+s++l+rs+d+ +++k             + +lv++ +e++ +v+i+ss +e+G+ql
  EPX71976.1 271 YIQEIRVLNKFYQVMNDDDRRAWYGPKHVEKAFEIGAIGELLISDSLFRSSDIaTRKK-------------WVSLVDTLKETKSTVYIFSSLHESGKQL 356
                 699**************************************************99988.............9*************************** PP

                 HHHTTTEEEEESS-- CS
      eRF1_3  99 vkafgGiaaiLRykv 113
                  + ++GiaaiL y+v
  EPX71976.1 357 -DLLSGIAAILTYPV 370
                 .************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (387 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       584  (0.0325729); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 2675.68
//
Query:       EPX71977.1  [L=515]
Description: nucleoporin Nup61 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-19   70.3   0.0    3.4e-19   69.3   0.0    1.5  1  Ran_BP1   RanBP1 domain
    7.2e-13   49.0   1.1    7.2e-13   49.0   1.1    4.1  4  NUP50     NUP50 (Nucleoporin 50 kDa)


Domain annotation for each model (and alignments):
>> Ran_BP1  RanBP1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.3   0.0   3.8e-23   3.4e-19       4     120 ..     400     512 ..     399     514 .. 0.91

  Alignments for each domain:
  == domain 1  score: 69.3 bits;  conditional E-value: 3.8e-23
                 -SSTTEEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-TTS-EEESTTESSEEEEEEEE-TTSSSEEEEEEEE CS
     Ran_BP1   4 sgEEdEevlfkqraKLfrfdaekkewkeRGvGdiKilkkkddekvRllmRrdqvlkvcaNhvitkemklkplagsdrslvwtaadaadeeakleqlaik 102
                 +gEE+E+ +f++raKL+rf+  +k++ + G+G ++++ ++++++ Rll R d+  k+++N ++ k++++k la ++++l      a+d+ + l+++ i+
  EPX71977.1 400 QGEENEDSIFETRAKLYRFNPTTKSYADIGLGPLRLNVDRTTNAARLLARVDGNGKLLLNVRLCKDFEYK-LA-GEKALTV--PAASDDGKGLVTYLIR 494
                 59*******************************************************************8.44.5566655..4567778889****** PP

                 ESSHHHHHHHHHHHHHHH CS
     Ran_BP1 103 fkkkeeadefkkkfeeak 120
                 +k+k +a+++ k+++e k
  EPX71977.1 495 VKEKGTAEQLLKNLNERK 512
                 **********99998865 PP

>> NUP50  NUP50 (Nucleoporin 50 kDa)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.0   1.1     8e-17   7.2e-13       1      67 [.       2      78 ..       2      82 .. 0.71
   2 ?   -2.8   0.7       1.1     1e+04      48      67 ..     234     250 ..     224     257 .. 0.51
   3 ?   -2.0   1.0      0.66   5.9e+03      54      66 ..     278     294 ..     261     296 .. 0.54
   4 ?   -6.8   7.4         2   1.8e+04      31      34 ..     376     379 ..     358     400 .. 0.53

  Alignments for each domain:
  == domain 1  score: 49.0 bits;  conditional E-value: 8e-17
                XXXXXSSXXXTTTX..XXXXXXXXXXXXXX.XXSHHHHCS-S-S---TT......T--XXX.........XXXXXXXXXXXXX CS
       NUP50  1 aKRgAdkqLtkdnwdededeeeeeagtfkk.AseevLakRkIkkakrrv......sssaps.........eaasssafsgFsg 67
                +KRgAd+qLtkd+++  +d+  +++ ++++ A+++v+a+RkI+k+k r+      +    +         + ++++++s+F++
  EPX71977.1  2 SKRGADHQLTKDQDE-SDDDR-SGSVELATeAPADVIASRKIAKPKTRKrpagisQ----PgglfsglakADPAKPVASPFTF 78
                7************99.55666.455556666**************99995543320....13455555555566677777765 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.1
                 TT--XXXXXXXXXXXXXXXX CS
       NUP50  48 vsssapseaasssafsgFsg 67 
                 +ss+     +++++  +Fs+
  EPX71977.1 234 KSSTF---GSETQTKTPFSF 250
                 22222...445555566665 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 0.66
                 X....XXXXXXXXXXXX CS
       NUP50  54 s....eaasssafsgFs 66 
                 s    +++++++ +gF+
  EPX71977.1 278 SnnenKEEDTTQKKGFN 294
                 02333555555556655 PP

  == domain 4  score: -6.8 bits;  conditional E-value: 2
                 XXSH CS
       NUP50  31 Asee 34 
                 A+e+
  EPX71977.1 376 ADED 379
                 3332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (515 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1565  (0.0872888); expected 358.6 (0.02)
Passed bias filter:                      552  (0.0307881); expected 358.6 (0.02)
Passed Vit filter:                        68  (0.00379274); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.72u 0.29s 00:00:01.01 Elapsed: 00:00:00.44
# Mc/sec: 3532.46
//
Query:       EPX71978.1  [L=962]
Description: isoleucine-tRNA ligase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   3.1e-152  507.9   0.0   4.2e-152  507.5   0.0    1.1  1  tRNA-synt_1   tRNA synthetases class I (I, L, M and V)
    8.3e-23   80.8   0.0    6.4e-17   61.4   0.0    3.1  3  tRNA-synt_1g  tRNA synthetases class I (M)
    3.7e-21   75.7   0.2    7.2e-21   74.7   0.2    1.5  1  Anticodon_1   Anticodon-binding domain of tRNA
  ------ inclusion threshold ------
       0.02   14.3   0.0        1.1    8.6   0.0    2.3  2  tRNA-synt_1e  tRNA synthetases class I (C) catalytic domain
       0.03   14.2   5.3       0.47   10.4   6.3    2.1  2  zf-FPG_IleRS  Zinc finger found in FPG and IleRS
      0.066   13.5   0.1       0.49   10.7   0.0    2.3  2  ANT           Phage antirepressor protein KilAC domain


Domain annotation for each model (and alignments):
>> tRNA-synt_1  tRNA synthetases class I (I, L, M and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  507.5   0.0  1.4e-155  4.2e-152      10     601 ..      59     663 ..      51     664 .. 0.90

  Alignments for each domain:
  == domain 1  score: 507.5 bits;  conditional E-value: 1.4e-155
  tRNA-synt_1  10 dvfkkelekekekkefilvdgPPyvtGslHiGhalaktlkdivirykrmkGkevlyvpGwDhaGlaieakvekklgakekkerkklgreefrekvrew 107
                  d++  ++++  + ++fil dgPPy++G+lHiGhal+k+lkd+v r+k ++G + +yvpGwD++Gl+ie k  ++       ++++ +  ++r+   ++
   EPX71978.1  59 DLYIWQKKNIPSSESFILLDGPPYANGKLHIGHALNKILKDMVNRWKLLNGRQIRYVPGWDCHGLPIELKALQQ-------NVQEGSPSQIRKTAEDF 149
                  56666656666799******************************************************976555.......355668999******** PP

  tRNA-synt_1 108 kaeyaeeirkqvkrlGvsvDfdreylTldkeleeavkevfvrladkgliyrgkklvnwstklktalselEveykdkk.dalihvafpl.......adk 197
                  +++ ++++ + ++rlGv++D++  y T+++e++ +  +vf  l++kg+i+r  k+v+ws+++++al+e E+ey+d++ +++++++fp+       +  
   EPX71978.1 150 AKNAMDDQMNLFRRLGVMADWSSRYTTMSHEYQISELQVFRTLVEKGMIFRQFKPVYWSPSSRSALAESEIEYNDSHvSSSLYFSFPVnnftsngK-- 245
                  ***************************************************************************9858899******66655444.. PP

  tRNA-synt_1 198 ee...vklviaTTtPeTllgdtavavnpeldyv...itkeklilaeallkslvkkesekkiledergkeLegkevelplvnrki.piiaddyvdkeaG 288
                       vk  ++TTtP+T+++++a+a +p+++y+     ++k+i+a++l+  l   + + + +e+ + k L+ +++++pl   k+ p +  +yv   +G
   EPX71978.1 246 -YyenVKALVWTTTPWTIPSNLALAFHPNVNYGifsNGEQKYIVAKNLVPFLSLLK-DFEEVETCTCKTLQSLTYQNPLIPGKVhPFLPAEYVSDTTG 341
                  .1555****************************88677899********9887655.44556899**************88776378999******** PP

  tRNA-synt_1 289 tGvVkiaPahdedDyevgkkynlevinildedgtlteea..aefeglkv.fdarkkvveelkekglllkaekiehsvpfcerskkpiiyrateqWfvr 383
                  tG+V++aP+h+ dDy +g ++ l++ +++d++g +t++a  +   gl+v ++  kkv+e +k+kg+ ++ ++ +h +p+++r+ kp+i rat qWf++
   EPX71978.1 342 TGIVHVAPGHGIDDYLLGLEHSLSPFSPVDDNGAYTKDAldGSLIGLDVlNEGGKKVLELMKAKGMVVQLTSYKHRYPYDWRNRKPLILRATAQWFIS 439
                  ***************************************88899***9836899******************************************** PP

  tRNA-synt_1 384 vkeladaalkavekvqfvpkskekryaswleniqdWciSRqrwWGhriplfvsketeevvvre.elkelvagreeeeaekkalekea.kdkl..kkek 477
                  +k+++d+a++a+++v+++p  + +r   +l+ +++WciSRqr WG +ip+ ++k+ +e   +  +++++   ++e ++ +++++++  ++ +  + + 
   EPX71978.1 440 LKSVKDKAIEALQSVKMIPANGMSRLSGFLNSRPEWCISRQRSWGLPIPVLYEKSSGEPLLTPtSISYIIS-KMEVKGVDAWFNDDEdINWVppEFRT 536
                  ********************************************************998887735666655.66666677776655404455998899 PP

  tRNA-synt_1 478 gelekdedvlDvWFsSgswpfstlgypeedteelkkffpadmlleGlDiirgWvarlillslaltgse..PfkevlvhglvrdeeGrKmSKslgNvid 573
                  +e+ + +++lDvWF+Sgs +++    p+++++ l      d+ leG+D++rgW+++lil+ la+ gs+  Pf ++++hg+v de+G K SKslgNv d
   EPX71978.1 537 KEYVRGKETLDVWFDSGSGFTT---VPFRKNKPL-----IDLCLEGSDQHRGWFQSLILIYLAVSGSKnsPFMSLFTHGFVFDEKGMKQSKSLGNVTD 626
                  9****************97654...467744555.....59********************999988777**************************** PP

  tRNA-synt_1 574 pldvik.........kygadalRltlilsdvgrdinl 601
                  p+d+++          yg d lRl++ + d ++dinl
   EPX71978.1 627 PEDILDgnnrtskkqLYGIDLLRLWVGSCDSTNDINL 663
                  *************999******************997 PP

>> tRNA-synt_1g  tRNA synthetases class I (M)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.4   0.0   2.1e-20   6.4e-17       8     137 ..      81     222 ..      77     231 .. 0.87
   2 !   13.9   0.0   5.6e-06     0.017     177     238 ..     429     488 ..     419     498 .. 0.87
   3 ?    1.1   0.0     0.042   1.3e+02     312     343 ..     600     632 ..     582     651 .. 0.81

  Alignments for each domain:
  == domain 1  score: 61.4 bits;  conditional E-value: 2.1e-20
                   B--SS---HHHHHHHHHHHHHHHHHHHTT-EEEEEEEE---SHHHHHHHHHTTS..........-HHHHHHHHHHHHHHHHHHTT---SEEEETTSH CS
  tRNA-synt_1g   8 pYangklHlGhllevisaDifaRykrlrgeevlfvcgtDehGtpielkAekegv..........tpeelvekvheeikelfkklnisfdkygrttse 94 
                   pYangklH+Gh+l+ i  D++ R+k l+g+++ +v g D hG pielkA +++v          t+e++++++ + + +lf++l++  d  +r t++
    EPX71978.1  81 PYANGKLHIGHALNKILKDMVNRWKLLNGRQIRYVPGWDCHGLPIELKALQQNVqegspsqirkTAEDFAKNAMDDQMNLFRRLGVMADWSSRYTTM 177
                   9************************************************99987444333333356788899999999***********99998888 PP

                   HHHHHHH..HHHHHHHHTT-EEEEEEEEEEETTTTEEE-GGG-EE CS
  tRNA-synt_1g  95 ehkelvq..eifkklkekgliyekeieqlycpkderflpdryveg 137
                   +h+   +  ++f++l ekg+i ++   ++++p+  + l+++++e 
    EPX71978.1 178 SHEYQISelQVFRTLVEKGMIFRQFKPVYWSPSSRSALAESEIEY 222
                   77765541368******************************9985 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 5.6e-06
                   EEE.EEEEEE-GGGGHHHHHHHH.HH-TTSHHHHHHHH.HHHHT----EE-ESS-SSS-EET CS
  tRNA-synt_1g 177 evketehlffklskfekklkewieeeekeleenvkkivkewlkegLkdlaisrdldwGipvP 238
                   +++ t ++f +l+++++k  e + ++ k  + n  + ++ +l++   +++isr+ +wG+p+P
    EPX71978.1 429 ILRATAQWFISLKSVKDKAIEAL-QSVKMIPANGMSRLSGFLNS-RPEWCISRQRSWGLPIP 488
                   68999****************99.78889999999999****99.89*************** PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.042
                   -S-EEEE--EE.E--------------HHHHHH CS
  tRNA-synt_1g 312 pkkvvaheylt.vegkKlSkSrgvvvkakeale 343
                     ++++h+++   +g K SkS g+v +++++l+
    EPX71978.1 600 FMSLFTHGFVFdEKGMKQSKSLGNVTDPEDILD 632
                   5678999998625699************99987 PP

>> Anticodon_1  Anticodon-binding domain of tRNA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.7   0.2   2.4e-24   7.2e-21       1     142 [.     707     861 ..     707     871 .. 0.73

  Alignments for each domain:
  == domain 1  score: 74.7 bits;  conditional E-value: 2.4e-24
  Anticodon_1   1 drwilselnklvkevteayeeyrfnkaasalyeffwndlcdwylelvkprlysesaedk.ra.aqevllevletllrllaPfmPfitEelwqr..... 91 
                  d+ +l++++++ +e++ +ye++ fnka++++ + +   l+++y++++k+rlys+++++  r+ aq++l+++l t++  ++P++P +++e+w++     
   EPX71978.1 707 DQVALAKTAEFQNEIQSSYESLTFNKAVQSILQYMNSFLSSTYFDSIKDRLYSDDPNSLsRRsAQTTLYKILLTIIWSISPIVPLLSQEVWRSfpntl 804
                  7889***************************************************9877*888****************************7677676 PP

  Anticodon_1  92 ...........eeeelgkkesimlaewpekaeelekele....eeevellkei....vkairklrselki 142
                                      s +l+   e +  l    e     ee++ll++i    + +++++rs+ +i
   EPX71978.1 805 qpsystpfhagA--------SFLLQGIQE-SVSL----EksllLEEYQLLQKIkysfNLLLQEARSQHGI 861
                  666554444331........333333332.1111....01112334444444433334455555555555 PP

>> tRNA-synt_1e  tRNA synthetases class I (C) catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.0   0.00036       1.1      21      93 ..      85     167 ..      76     225 .. 0.62
   2 ?    3.3   0.0     0.015        45     235     270 ..     598     633 ..     590     670 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00036
                   S--BHHHHHHHHHHHHHHHHHHHTT-EEEEEEEBB-....-SHHHHHHHHHTTS-......HHHHHHHHHHHHHHHHHHTT-- CS
  tRNA-synt_1e  21 dashlGhaRslvafDilrrilqalgYdvqfvqnvtD....idDkiikrareeeks......vkelaekfieefkkdleaLnvl 93 
                    + h+Gha + +  D+++r+    g ++++v         i+ k +++ ++e++        +++a++ +++ ++ ++ L+v 
    EPX71978.1  85 GKLHIGHALNKILKDMVNRWKLLNGRQIRYVPGWDChglpIELKALQQNVQEGSPsqirktAEDFAKNAMDDQMNLFRRLGVM 167
                   579****************************8764311115555555555444324433333333333333333444455554 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.015
                   S--EEEEEEE--EEETTBE--TTTT---BHHHHHTT CS
  tRNA-synt_1e 235 kqlvkyflhnghlkiegekmsksLknfitikdvlkk 270
                   ++++  f h  +   +g k sksL+n++  +d+l  
    EPX71978.1 598 SPFMSLFTHGFVFDEKGMKQSKSLGNVTDPEDILDG 633
                   567778888777888899**********99999964 PP

>> zf-FPG_IleRS  Zinc finger found in FPG and IleRS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   6.3   0.00016      0.47       2      27 ..     937     956 ..     937     956 .. 0.93
   2 ?    4.4   0.4     0.012        35       1      11 [.     950     960 ..     950     962 .] 0.84

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00016
                   SB-TTT--BBEEEECTTEEEEE-TTT CS
  zf-FPG_IleRS   2 epCpRCwryiervgqagrstyfCprC 27 
                   ++C RCw++++++g       +C+rC
    EPX71978.1 937 KKCLRCWMHTVSEGE------VCQRC 956
                   79************9......88888 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.012
                   TSB-TTT--BB CS
  zf-FPG_IleRS   1 GepCpRCwryi 11 
                   Ge+C RC +++
    EPX71978.1 950 GEVCQRCNGVL 960
                   9******8875 PP

>> ANT  Phage antirepressor protein KilAC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00016      0.49      26      65 ..     174     213 ..     161     231 .. 0.85
   2 ?   -0.9   0.1      0.67     2e+03      33      68 ..     391     426 ..     388     440 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00016
         ANT  26 iteiAkllgigenrlfelLrekgilyrqkgsgqnlpyqdy 65 
                  t++ ++++i+e ++f+ L ekg+++rq +  ++ p  ++
  EPX71978.1 174 YTTMSHEYQISELQVFRTLVEKGMIFRQFKPVYWSPSSRS 213
                 68899**********************9776688887665 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.67
         ANT  33 lgigenrlfelLrekgilyrqkgsgqnlpyqdyidk 68 
                 l+ g +++ el+++kg++ + +  ++  py ++ +k
  EPX71978.1 391 LNEGGKKVLELMKAKGMVVQLTSYKHRYPYDWRNRK 426
                 66788999**********998777788999887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (962 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       603  (0.0336327); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.75u 0.30s 00:00:01.05 Elapsed: 00:00:00.52
# Mc/sec: 5604.34
//
Query:       EPX71979.1  [L=116]
Description: hypothetical protein SOCG_03913 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0061   16.6   0.0     0.0081   16.2   0.0    1.3  1  RNA_bind  RNA binding domain
  ------ inclusion threshold ------
      0.019   14.8   0.0      0.027   14.3   0.0    1.4  1  NCBP3     Nuclear cap-binding protein subunit 3


Domain annotation for each model (and alignments):
>> RNA_bind  RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   9.1e-07    0.0081      22      58 ..      33      69 ..      15      86 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 9.1e-07
                HHHHHHHTTTSEEEEEEEEETTEEEEEEEEE-HHHHH CS
    RNA_bind 22 tsDivqlFspfGsvyvsWlddtsAfvaLhrrdqasvv 58
                t+ +++++ p G++ + W dd  A+ +    +qa+++
  EPX71979.1 33 TEALLRKYFPIGNIIITWEDDHRAYLTFDSSEQAQSA 69
                556889999***********************99875 PP

>> NCBP3  Nuclear cap-binding protein subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0     3e-06     0.027      30      56 ..      31      69 ..       1      72 [. 0.72

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 3e-06
       NCBP3 30 e............epfriEWIdDtsvnvvFkseedaakA 56
                              +  i W dD+++ ++F+s+e+a++A
  EPX71979.1 31 YlteallrkyfpiGNIIITWEDDHRAYLTFDSSEQAQSA 69
                344456666666688899*******************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       336  (0.0187406); expected 358.6 (0.02)
Passed bias filter:                      289  (0.0161191); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.45
# Mc/sec: 772.28
//
Query:       EPX71980.1  [L=309]
Description: TRE Xcomplex subunit Tex1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.4e-20   71.8   0.0     0.0034   17.6   0.0    6.0  6  ANAPC4_WD40    Anaphase-promoting complex subunit 4 WD40 doma
    3.4e-17   62.5  12.2    7.4e-06   26.6   0.7    5.7  6  WD40           WD domain, G-beta repeat
    3.6e-07   30.3   0.2    3.1e-05   23.9   0.1    2.8  2  eIF2A          Eukaryotic translation initiation factor eIF2A
     0.0022   16.1   0.2     0.0061   14.6   0.0    1.8  2  IKI3           IKI3 family
     0.0047   15.5   0.0      0.041   12.4   0.0    1.9  2  Cytochrom_D1   Cytochrome D1 heme domain
  ------ inclusion threshold ------
      0.021   14.1   0.0       0.38   10.0   0.0    2.6  3  WD40_like      WD40-like domain
      0.092   11.8   0.0       0.42    9.6   0.0    1.9  2  Coatomer_WDAD  Coatomer WD associated region


Domain annotation for each model (and alignments):
>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.1   1.4e-06    0.0037      35      68 ..      21      54 ..      10      77 .. 0.85
   2 ?    4.2   0.0     0.021        55      30      79 ..      62     111 ..      51     117 .. 0.72
   3 !    8.0   0.0    0.0014       3.5      45      78 ..     118     151 ..     114     159 .. 0.91
   4 !   14.2   0.0   1.6e-05     0.041       2      68 ..     159     224 ..     158     236 .. 0.90
   5 !   17.6   0.0   1.3e-06    0.0034      38      89 ..     236     285 ..     229     286 .. 0.89
   6 !    8.8   0.0   0.00078         2      25      59 ..     267     298 ..     265     304 .. 0.86

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 1.4e-06
  ANAPC4_WD40 35 dkedsevrsLaWkpdgklLavaysdgevrlldae 68
                 ++++++vrsL W+ +g+ La + +d++vr+ +  
   EPX71980.1 21 HGHQGSVRSLGWNVSGHRLATSSNDSTVRIWNLD 54
                 57899*************************9875 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.021
  ANAPC4_WD40  30 wtleedkedsevrsLaWkpdg.klLavaysdgevrlldaesgkvvhslsvk 79 
                   +l  + +++ v+++ W p     L+ +ys   +r+ d  s+k + +++ +
   EPX71980.1  62 TEL-GPRSNGLVEQVVWDPTHsDRLMTVYSGKMIRFWDYRSAKPIAEIQSD 111
                  555.56777889999998864257888888899999999999999888766 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.0014
  ANAPC4_WD40  45 aWkpdgklLavaysdgevrlldaesgkvvhslsv 78 
                  +W+p+g+  +v+  d  ++++da + +++++++ 
   EPX71980.1 118 SWSPSGRYCCVGSRDDMLSFIDAREWQIMQTFQQ 151
                  6**************************9999875 PP

  == domain 4  score: 14.2 bits;  conditional E-value: 1.6e-05
  ANAPC4_WD40   2 swcptmDLiAlatedgellvfRl.ngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldae 68 
                  +w+ + DL+ + t  g ++v    + qrv+++  +++ s+  ++  +pd++ +av+ +d  v l d  
   EPX71980.1 159 CWSFSEDLFYMTTGLGTVQVIEWpSLQRVYEI--NAHTSNCYCIDISPDNERIAVGGADAIVTLWDTD 224
                  79999*************99887688******..89999************************99976 PP

  == domain 5  score: 17.6 bits;  conditional E-value: 1.3e-06
  ANAPC4_WD40  38 dsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                     +rsL ++ dg++La + +d  + + d  +g+ v + +++     ++l W
   EPX71980.1 236 TYPIRSLGFSFDGRFLASGSEDRYIDIADTLTGEQVWKQPTNGP--LNKLAW 285
                  5679*******************************999988877..688887 PP

  == domain 6  score: 8.8 bits;  conditional E-value: 0.00078
  ANAPC4_WD40  25 ngqrvwtleedkedsevrsLaWkpdgklLavaysd 59 
                   g++vw+     +++  ++LaW+p  ++La a+ +
   EPX71980.1 267 TGEQVWKQ---PTNGPLNKLAWNPTKHILAYAFTE 298
                  57899998...688999*************99765 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.7   2.9e-09   7.4e-06       5      38 .]      18      52 ..      13      52 .. 0.91
   2 ?   -0.4   0.1      0.98   2.5e+03      31      38 .]      91      98 ..      68      98 .. 0.73
   3 ?    5.4   0.1     0.015        38      17      34 ..     118     135 ..     102     139 .. 0.82
   4 !   18.3   0.0   1.2e-06    0.0031       4      38 .]     187     222 ..     183     222 .. 0.85
   5 !   15.1   0.0   1.2e-05     0.031      12      34 ..     238     260 ..     226     262 .. 0.81
   6 ?   -1.9   0.0       2.9   7.6e+03      13      26 ..     280     293 ..     270     295 .. 0.77

  Alignments for each domain:
  == domain 1  score: 26.6 bits;  conditional E-value: 2.9e-09
                EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38
                r l GH +sv+sl ++ +g+ la++s D tvriW+
  EPX71980.1 18 RDLHGHqGSVRSLGWNVSGHRLATSSNDSTVRIWN 52
                5589**888*************************8 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.98
                TSEEEEEE CS
        WD40 31 DgtvriWd 38
                 + +r+Wd
  EPX71980.1 91 GKMIRFWD 98
                67899998 PP

  == domain 3  score: 5.4 bits;  conditional E-value: 0.015
                 EEETTSSEEEEEETTSEE CS
        WD40  17 afspdgawlasGsdDgtv 34 
                 ++sp+g++ + Gs+D  +
  EPX71980.1 118 SWSPSGRYCCVGSRDDML 135
                 39******999**99766 PP

  == domain 4  score: 18.3 bits;  conditional E-value: 1.2e-06
                 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++++ +H s+ ++++ spd+  +a G+ D  v +Wd
  EPX71980.1 187 VYEINAHtSNCYCIDISPDNERIAVGGADAIVTLWD 222
                 344569*877*************************9 PP

  == domain 5  score: 15.1 bits;  conditional E-value: 1.2e-05
                 SEEEEEEETTSSEEEEEETTSEE CS
        WD40  12 svtslafspdgawlasGsdDgtv 34 
                 +++sl fs dg++lasGs+D+ +
  EPX71980.1 238 PIRSLGFSFDGRFLASGSEDRYI 260
                 4999****************987 PP

  == domain 6  score: -1.9 bits;  conditional E-value: 2.9
                 EEEEEEETTSSEEE CS
        WD40  13 vtslafspdgawla 26 
                  + la++p ++ la
  EPX71980.1 280 LNKLAWNPTKHILA 293
                 68899999988775 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.1   1.2e-08   3.1e-05      58     162 ..      68     171 ..      32     180 .. 0.82
   2 ?    2.0   0.0     0.064   1.6e+02      95     118 ..     272     295 ..     238     307 .. 0.74

  Alignments for each domain:
  == domain 1  score: 23.9 bits;  conditional E-value: 1.2e-08
                 SSS.EEEEEE-TTSS-.EE.EEESSSSCEEEEEECS.CEEEEEEEEES--EE.EE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-TT.--EEEE CS
       eIF2A  58 kegpihdvaWspkske.fa.viyGkmpakvslfdlk.vkviskleeqkrNti.ffspkgklvllaGfgnlaGeleiwdvkkkkkiakaeaan.atlvew 151
                  +g + +v W+p+ ++ ++ v  Gkm   + ++d + +k+i++++++++N    +sp+g++ +++   ++   l++ d  + + ++++++++ +  + w
  EPX71980.1  68 SNGLVEQVVWDPTHSDrLMtVYSGKM---IRFWDYRsAKPIAEIQSDYNNIYgSWSPSGRYCCVGSRDDM---LSFIDAREWQIMQTFQQPCeTNECCW 160
                 67899******976542441445665...99****8799*******99998657***************9...****************99835579** PP

                 -TTSSEEEEEE CS
       eIF2A 152 spdgryvlTat 162
                 s + +++   t
  EPX71980.1 161 SFSEDLFYMTT 171
                 99888775444 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.064
                 EEEEEEES--EEEE-TTSSEEEEE CS
       eIF2A  95 iskleeqkrNtiffspkgklvlla 118
                  ++  + + N + ++p+ ++++ a
  EPX71980.1 272 WKQPTNGPLNKLAWNPTKHILAYA 295
                 344567789999999999998876 PP

>> IKI3  IKI3 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   2.4e-06    0.0061     301     377 ..      21      98 ..      12     113 .. 0.85
   2 ?   -2.0   0.0      0.26   6.6e+02     125     146 ..     157     178 ..     138     198 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 2.4e-06
                 .XXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXX.XXXXXXX CS
        IKI3 301 ekeeeevqsLaWsadSevLavrledr.vqlwtisNyhWYLKqelrysasegveevkWdpekpltLlvltesgkievvd 377
                 + ++ +v+sL W+ +++ La + +d+ v++w      +    el   ++  ve+v Wdp++ ++L+ + + + i+  d
  EPX71980.1  21 HGHQGSVRSLGWNVSGHRLATSSNDStVRIWNLDRLDFKYSTELGPRSNGLVEQVVWDPTHSDRLMTVYSGKMIRFWD 98 
                 6678899**************998888**********99999999888889999*************99966655544 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.26
                 XXXXXXXXXXXXXXXXXXXXXX CS
        IKI3 125 aaawspdeellalvtgeekvvl 146
                   +ws  e+l+ ++tg ++v +
  EPX71980.1 157 ECCWSFSEDLFYMTTGLGTVQV 178
                 479***********99988854 PP

>> Cytochrom_D1  Cytochrome D1 heme domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.0   1.6e-05     0.041      17     114 ..      94     189 ..      85     210 .. 0.77
   2 ?    2.3   0.0     0.019        48      13      95 ..     172     255 ..     162     280 .. 0.63

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.6e-05
                   EEEEETTT-SEEEEEE-STTEEEEEE-TT.SSEEEEEETTSEEEEEESSSSSEEEEEE-SSEEEEEEE-.-TTSEEEEEEEETTEEEEEETTT--EE CS
  Cytochrom_D1  17 valldgdskeilavletgyalHisrvfasdgRyvyvigRDgkvtliDLwakeivaevkiGlnarsvavS.qddryvivgnYlPgqlvildaetLelv 112
                   ++  d  s + +a +++ y+   +  + s gRy  v +RD  ++ iD  + +i+++ ++  ++ +   S  +d + ++     g++++++   L+ v
    EPX71980.1  94 IRFWDYRSAKPIAEIQSDYNNIYGSWSPS-GRYCCVGSRDDMLSFIDAREWQIMQTFQQPCETNECCWSfSEDLFYMTTG--LGTVQVIEWPSLQRV 187
                   56667788899999*****9877777777.*******************999*****99999999888865555444332..255555555555555 PP

                   EE CS
  Cytochrom_D1 113 kv 114
                    +
    EPX71980.1 188 YE 189
                   55 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.019
                   GGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT.SSEEEEEETTSEEEEEESSSSSEEEEE.E-SSEEEEEEE--TTSEEEEEE CS
  Cytochrom_D1  13 dagkvalldgdskeilavletgyalHisrvfasdgRyvyvigRDgkvtliDLwakeivaev.kiGlnarsvavSqddryvivgn 95 
                   + g v++++  s + +  ++++         ++d+  + v g D+ vtl D  +    + + +     rs+  S d+r+++ g+
    EPX71980.1 172 GLGTVQVIEWPSLQRVYEINAHTSNCYCIDISPDNERIAVGGADAIVTLWDTDEWICQNSItRSTYPIRSLGFSFDGRFLASGS 255
                   567777777777777777777666666666677777777888888888877655554444414455677888888888877775 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.26   6.8e+02       9      63 ..     120     174 ..     113     192 .. 0.69
   2 ?   10.0   0.0   0.00015      0.38       2      34 ..     196     228 ..     195     236 .. 0.85
   3 ?   -0.2   0.0      0.19   4.9e+02       3      35 ..     239     271 ..     237     273 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.26
   WD40_like   9 skkgslilyGgkddkctvlkleslesvsivesfedSvifvklldddlilvvtlDG 63 
                 s+ g +  +G++dd +  ++ +  ++++ +++  +    +   ++dl+ ++t  G
  EPX71980.1 120 SPSGRYCCVGSRDDMLSFIDAREWQIMQTFQQPCETNECCWSFSEDLFYMTTGLG 174
                 6778888888888888888887777777666666665566666666555555555 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00015
   WD40_like   2 eiYsidiskkgslilyGgkddkctvlklesles 34 
                 + Y idis++++ i++Gg d  +t+ +++  + 
  EPX71980.1 196 NCYCIDISPDNERIAVGGADAIVTLWDTDEWIC 228
                 67***********************99987655 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.19
   WD40_like   3 iYsidiskkgslilyGgkddkctvlkleslesv 35 
                 i s+ +s++g +++ G++d  + ++++ ++e+v
  EPX71980.1 239 IRSLGFSFDGRFLASGSEDRYIDIADTLTGEQV 271
                 678999******************999888766 PP

>> Coatomer_WDAD  Coatomer WD associated region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.0   0.00016      0.42     116     175 ..      73     142 ..      21     237 .. 0.70
   2 ?    0.1   0.0      0.13   3.2e+02      29      92 ..     233     305 ..     216     307 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00016
                    X.........XXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXX CS
  Coatomer_WDAD 116 g.........GalLgvksegsvsfYDweqgklvrridvkkvknVv..wsddgelvalvskdtvyilsynle 175
                                l+ v s +++ f+D  + k +++i+ +  +n++  ws++g ++++ s+d++      +e
     EPX71980.1  73 EqvvwdpthsDRLMTVYSGKMIRFWDYRSAKPIAEIQSDY-NNIYgsWSPSGRYCCVGSRDDMLSFIDARE 142
                    444446666567999999*******************996.777555**********99998776555554 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.13
                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXXXXXXXXXXXXX...XXXXXX.XXXXX CS
  Coatomer_WDAD  29 gsieiypqslshnpngrfvlVcgdgeyiiyt.....alalrnkaygkgldfvwvssnr...favles.sksvk 92 
                     ++   ++sl ++ +grf++   +++yi +      ++ +++ + g  ++ +w++ +    +a++e  s+ +k
     EPX71980.1 233 TRSTYPIRSLGFSFDGRFLASGSEDRYIDIAdtltgEQVWKQPTNGPLNKLAWNPTKHilaYAFTEPtSSGLK 305
                    445556899999999999999888888766668999999**************99444455888876455555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (309 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       414  (0.0230911); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.54u 0.29s 00:00:00.83 Elapsed: 00:00:00.45
# Mc/sec: 2070.38
//
Query:       EPX71981.1  [L=461]
Description: CAMK/RAD53 protein kinase Cds1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.2e-75  251.6   0.0      1e-74  251.2   0.0    1.1  1  Pkinase          Protein kinase domain
    7.7e-36  123.7   0.0    1.1e-35  123.2   0.0    1.2  1  Pkinase_Tyr      Protein tyrosine kinase
    3.9e-14   52.7   0.2      8e-14   51.8   0.2    1.6  1  FHA              FHA domain
    3.4e-10   39.7   0.0    3.2e-09   36.5   0.0    2.0  2  Kinase-like      Kinase-like
    2.1e-05   23.5   0.0    3.5e-05   22.7   0.0    1.2  1  Pkinase_fungal   Fungal protein kinase
    2.7e-05   23.9   0.1    4.8e-05   23.0   0.1    1.3  1  RIO1             RIO1 family
    3.5e-05   23.2   0.0    5.6e-05   22.6   0.0    1.3  1  Kdo              Lipopolysaccharide kinase (Kdo/WaaP) family
     0.0014   18.9   0.0     0.0042   17.4   0.0    1.8  1  Yop-YscD_cpl     Inner membrane component of T3SS, cytoplasmi
     0.0028   17.6   0.0        1.1    9.1   0.0    2.5  3  APH              Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.012   14.8   0.0      0.024   13.9   0.0    1.4  1  Fructosamin_kin  Fructosamine kinase
      0.079   12.6   0.0        4.4    7.0   0.0    2.8  3  ToxS             Trans-membrane regulatory protein ToxS
       0.16   11.6   0.2          2    8.0   0.0    2.1  2  FTA2             Kinetochore Sim4 complex subunit FTA2


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  251.2   0.0   6.9e-78     1e-74       1     264 []     166     432 ..     166     432 .. 0.92

  Alignments for each domain:
  == domain 1  score: 251.2 bits;  conditional E-value: 6.9e-78
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.....HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.....kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgs 94 
                 ye+l+ lG+G+f+ V  av+ etg+ +A+K+i+k+k+  ++      + ++rEi+ilk+l+hp +v++ evfe+++e+++v+eyvegg+l+d+l ++gs
  EPX71981.1 166 YEVLRALGTGTFAIVKLAVDLETGEYYAIKVINKKKILLTSSekgatEMFQREIEILKTLHHPGVVQCREVFETDEEIFIVMEYVEGGDLMDFLIANGS 264
                 78999******************************98655555578899************************************************** PP

                 --HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.BCTTTSCGGGS-HHHHTT......SCBSHHHHHHHHHHH CS
     Pkinase  95 lseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.ltsfvgtseYlAPEvlke......neyskkvDvWslGvi 186
                 ++e++ k ++k+i+e l ylH+ gi HrD+KpeNiLi ++ +lK++DFGlak l+ + + +++f+gt  YlAPEvl++       +y++kvD+WslG++
  EPX71981.1 265 IDEQDSKPLLKEIIETLIYLHDSGIAHRDIKPENILITKDFHLKLSDFGLAKVLHGQGTfFETFCGTMGYLAPEVLQSkttppvGGYGNKVDIWSLGCV 363
                 ********************************************************9999****************5534555578************* PP

                 HHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 187 lyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 ly +lt + pf++ +++e+v+ + +          +  ++   ++e+s+e +dl++++++ dp+kR++ +e+l+hp++
  EPX71981.1 364 LYVMLTATIPFAAPSQEESVKLISKA---------DFPMSPLLENEVSSEGIDLITQMFQLDPSKRISGREALEHPWF 432
                 ************77777766665555.........344555567899******************************8 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.2   0.0   7.1e-39   1.1e-35       3     251 ..     168     422 ..     166     429 .. 0.88

  Alignments for each domain:
  == domain 1  score: 123.2 bits;  conditional E-value: 7.1e-39
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEE..EESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavK..tlkeeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkeke 98 
                  + + lG G+f+ V  +   ++ e   +kV+ K  +l  ++++  +e++ +e++i+k+l+hp +v++  v   +e+++iv+eyv+gGdL +fL ++   
   EPX71981.1 168 VLRALGTGTFAIVKLAVDLETGEYYAIKVINKkkILLTSSEKGATEMFQREIEILKTLHHPGVVQCREVFETDEEIFIVMEYVEGGDLMDFLIAN--G 263
                  5689************9997777888888765114566777777999***********************************************9..9 PP

                  TSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE......EEHHHHHHH CS
  Pkinase_Tyr  99 kltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk......ftsksDvWs 190
                  +++ +d   +  ++ + + yL++  + Hrd+   N+L++++ + k+sDfGLa+ +  + + +  e+    + ++apE+l++k+      +  k D+Ws
   EPX71981.1 264 SIDEQDSKPLLKEIIETLIYLHDSGIAHRDIKPENILITKDFHLKLSDFGLAKVL--HGQGTFFETFCGTMGYLAPEVLQSKTtppvggYGNKVDIWS 359
                  ******************************************************9..444455566677899**********99************** PP

                  HHHHHHHHHTTSSGTTTTSHHHHHHHHHHTTEES-BB...TTSBHHHHHHHHHHT-SSGGGS-- CS
  Pkinase_Tyr 191 fGvllwEiftlgespypglkneevleklkegkrlekp...ekcpeelyelmkkcweedpeeRpt 251
                   G +l+ ++t +  p++  ++ee ++ +++      p   +++++e  +l+++ ++ dp++R +
   EPX71981.1 360 LGCVLYVMLT-ATIPFAAPSQEESVKLISKADFPMSPlleNEVSSEGIDLITQMFQLDPSKRIS 422
                  ******9999.99*************99655544444222678899999*************87 PP

>> FHA  FHA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.8   0.2   5.3e-17     8e-14       1      69 []      59     132 ..      59     132 .. 0.89

  Alignments for each domain:
  == domain 1  score: 51.8 bits;  conditional E-value: 5.3e-17
                 EEEESSTTSSEETTSTTSTTTEEEE...EEETT......CEEEEEEEESSSSSEEETTEEESTTSEEEE-TTEEEEET CS
         FHA   1 vtiGRssdcdivlddpsiSrkHali...kfdkg......sgkvyleDlgSknGtfvNgqrigkgepveLksgdvielG 69 
                 +++GR+++c + +  p++S  H++i   +          s+ ++l+D +S+nGt++N +r++k+ ++ L++gd+i++G
  EPX71981.1  59 WRFGRHRTCEVSIGGPRVSNFHFEIyegH---AsetesrSNVIFLHD-HSSNGTYLNLERLPKNGRTLLSHGDEIRVG 132
                 789**********************5551...345566688******.7**************************987 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.14   2.1e+02      18      47 ..     170     199 ..     157     231 .. 0.83
   2 !   36.5   0.0   2.1e-12   3.2e-09     146     259 ..     271     383 ..     253     420 .. 0.80

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.14
  Kinase-like  18 ellkkgdrsvvfevkdqetgeplavkvfll 47 
                    l+ g + +v ++ d etge+ a+kv   
   EPX71981.1 170 RALGTGTFAIVKLAVDLETGEYYAIKVINK 199
                  4688999999****************9765 PP

  == domain 2  score: 36.5 bits;  conditional E-value: 2.1e-12
  Kinase-like 146 rlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggft...aLvragtkvvlseve..kgfaPpEllgsrggytrknktkmthkldaWqlGl 238
                  + ll  ++i    +L++ g+ h +++++n+l  +++ l+l +f+    L  +gt     + +   g+  pE+l s+++        +  k+d W lG 
   EPX71981.1 271 KPLL-KEIIETLIYLHDSGIAHRDIKPENILITKDFHLKLSDFGlakVLHGQGTFF--ETFCgtMGYLAPEVLQSKTT---PPVGGYGNKVDIWSLGC 362
                  5555.67899999******************************7311344444444..45556699*********888...467899*********** PP

  Kinase-like 239 viyriwclklPltlateeake 259
                  v y +  +++P+  + +e + 
   EPX71981.1 363 VLYVMLTATIPFAAPSQEESV 383
                  ************988877654 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.0   2.4e-08   3.5e-05     312     389 ..     274     343 ..     271     370 .. 0.76

  Alignments for each domain:
  == domain 1  score: 22.7 bits;  conditional E-value: 2.4e-08
  Pkinase_fungal 312 lrDaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlkge 389
                     l++ I+++  L+ + gi HrDi  +Nilit     ++ +  L+D+ lak l+  + +   ++  GT+ ++a evl+ +
      EPX71981.1 274 LKEIIETLIYLH-DSGIAHRDIKPENILIT-----KDFHLKLSDFGLAKVLHG-QGT-FFETFCGTMGYLAPEVLQSK 343
                     6678999999**.*****************.....899**************5.333.347999***********943 PP

>> RIO1  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.1   3.2e-08   4.8e-05      46     149 ..     206     312 ..     184     319 .. 0.81

  Alignments for each domain:
  == domain 1  score: 23.0 bits;  conditional E-value: 3.2e-08
                 -HHHHHHHHHHHHHHHHHHHHHTT.--S--EEEEETTE.EEEE--EETTEEGGBHHHCG.-HHHHHHHHHHHHHHHHHHHHTSTEEESS-STTSEEEET CS
        RIO1  46 nprklvklwaekEfrnLkrleeag.vpvPkpielkrhv.lvmefigedgvaapklkdve.eeeeaeelyeevleemrklykeaglvHaDLSeyNvlvde 141
                 +  k +  + ++E+++Lk l++ g v++ ++ e  +++ +vme+++  ++    + + + +e++ + l++e++e+++  +++ g+ H D+   N+l+++
  EPX71981.1 206 SSEKGATEMFQREIEILKTLHHPGvVQCREVFETDEEIfIVMEYVEGGDLMDFLIANGSiDEQDSKPLLKEIIETLIY-LHDSGIAHRDIKPENILITK 303
                 55555667789*************89********9997589*****44444445555554488889999999997655.55****************** PP

                 T.EEEE--G CS
        RIO1 142 d.kvviIDv 149
                 d ++ + D+
  EPX71981.1 304 DfHLKLSDF 312
                 *88888887 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.0   3.7e-08   5.6e-05      57     164 ..     214     310 ..     152     316 .. 0.79

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 3.7e-08
         Kdo  57 ravrEfrllkrLeeagvavpkpvaagavkvgleyrAlllterlegaqdLedllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqee 155
                  + rE+++lk L++ gv   + v+   +        ++++e +eg  dL d+l    +++e+  + llk++  +   lh+ g+ H+d+ + nil+ ++ 
  EPX71981.1 214 MFQREIEILKTLHHPGVVQCREVFETDE------EIFIVMEYVEGG-DLMDFLIANGSIDEQDSKPLLKEIIETLIYLHDSGIAHRDIKPENILITKDF 305
                 4568999999999999988888886655......459*******96.77777776677*************************************9987 PP

         Kdo 156 eeeaeiwli 164
                     ++ l 
  EPX71981.1 306 ----HLKLS 310
                 ....55555 PP

>> Yop-YscD_cpl  Inner membrane component of T3SS, cytoplasmic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   2.8e-06    0.0042      13      83 ..      53     133 ..      47     135 .. 0.79

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 2.8e-06
                   EETTEEEEEES-TT-SEE---TTS-TT-EEEE......EE.TTEEEEEE-CESS--EETTEE-SECC...--TTSEEEETT CS
  Yop-YscD_cpl  13 eLeegevviGsdedcDivLsDkevsrkhlkLe......ve.eesvrledlgsrngllvngerveele...lrpgdvlelGt 83 
                   ++++g +++G++++c++ +  + vs+ h++++      +e  ++v      s ng+++n er  + +   l++gd++ +G 
    EPX71981.1  53 DVHNGVWRFGRHRTCEVSIGGPRVSNFHFEIYeghaseTEsRSNVIFLHDHSSNGTYLNLERLPKNGrtlLSHGDEIRVGL 133
                   6899**************************97222222121233444558999**********9777789*********95 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       3.8   5.7e+03     158     172 ..     113     127 ..     112     129 .. 0.84
   2 !    9.1   0.0   0.00073       1.1      27     107 ..     206     286 ..     192     290 .. 0.78
   3 !    6.3   0.0    0.0054         8     167     187 ..     288     307 ..     285     319 .. 0.74

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 3.8
                 HH--SSS-EEEE-SS CS
         APH 158 allpgelptvllHgD 172
                 ++lp++++t l HgD
  EPX71981.1 113 ERLPKNGRTLLSHGD 127
                 46777899******9 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00073
                 EE-TTS-HHHHHHHHHHHHHHHHTT-.B--B-CTTBS-EEETTEEEEEEE----EE-SS......HHHHHHHHHHHHHHHHHHCCHHC CS
         APH  27 rnpparaaeeirrevallrlLakagv.pvPevlagdtddeeigllfalieyvpgrsllr......klsaaqlpellealgeflaalhq 107
                  ++++ a e ++re ++l+ L+  gv ++ ev+         +  f ++eyv+g +l +        ++++++ ll +++e+l  lh+
  EPX71981.1 206 SSEKG-ATEMFQREIEILKTLHHPGVvQCREVFE------TDEEIFIVMEYVEGGDLMDfliangSIDEQDSKPLLKEIIETLIYLHD 286
                 45555.6677777777777777777766655555......4444689**************9*9999999999999999999999997 PP

  == domain 3  score: 6.3 bits;  conditional E-value: 0.0054
                 EEE-SS-SGGGEEEC..TTEE CS
         APH 167 vllHgDlhpgNllvdpddgrv 187
                 ++ H+D++p N+l++  d ++
  EPX71981.1 288 GIAHRDIKPENILIT-KDFHL 307
                 688************.55555 PP

>> Fructosamin_kin  Fructosamine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   1.6e-05     0.024      39      96 ..     198     252 ..     173     258 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.6e-05
  Fructosamin_kin  39 eeqrfFvklnekealemFeaEaesLealaetqtirvPkvlavGelkdasfLvleyLel 96 
                      +++++ +  +ek a+emF+ E+e L++l++   +++ +v+   e++++ f+v+ey+e 
       EPX71981.1 198 NKKKILLTSSEKGATEMFQREIEILKTLHHPGVVQCREVF---ETDEEIFIVMEYVEG 252
                      56778888999*****************999999998887...57899*******986 PP

>> ToxS  Trans-membrane regulatory protein ToxS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       2.4   3.6e+03      37      52 ..      89     104 ..      86     115 .. 0.73
   2 ?    7.0   0.0     0.003       4.4     112     146 ..     179     213 ..     171     215 .. 0.83
   3 ?    2.3   0.0     0.082   1.2e+02     102     122 ..     398     418 ..     385     422 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 2.4
        ToxS  37 rkveqtsnvvylPnkt 52 
                 +++e +snv++l +++
  EPX71981.1  89 SETESRSNVIFLHDHS 104
                 5788999999997653 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.003
        ToxS 112 likklfkldaeqsrridivnektlLltsLnhgskv 146
                 ++k    l++ +   i ++n+k +Llts ++g++ 
  EPX71981.1 179 IVKLAVDLETGEYYAIKVINKKKILLTSSEKGATE 213
                 667777788888889*************9999875 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.082
        ToxS 102 skdfseeqlklikklfkldae 122
                 +++ s+e ++li+++f+ld  
  EPX71981.1 398 ENEVSSEGIDLITQMFQLDPS 418
                 5788999***********964 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0      0.14   2.1e+02      24      90 ..     166     234 ..     150     237 .. 0.69
   2 ?    8.0   0.0    0.0014         2     177     204 ..     273     300 ..     245     315 .. 0.83

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.14
        FTA2  24 iefleyLgkglhsiV.lkvkir.gkeYALKlFrfleaeeleeaeedlkiprealkelasysdpfasECR 90 
                 +e l  Lg g+ +iV l v+ + g+ YA+K+  + +   ++++++ +++ ++ ++ l+   +p   +CR
  EPX71981.1 166 YEVLRALGTGTFAIVkLAVDLEtGEYYAIKVINKKKILLTSSEKGATEMFQREIEILKTLHHPGVVQCR 234
                 566667777666665333444414589999877776655557777778888888888888888888887 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0014
        FTA2 177 qlpkllrdlkklhklgIvvrDlkeenyi 204
                  l+++++ l  lh +gI +rD+k+en++
  EPX71981.1 273 LLKEIIETLIYLHDSGIAHRDIKPENIL 300
                 57899********************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (461 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       369  (0.0205812); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 3147.18
//
Query:       EPX71982.1  [L=239]
Description: dephospho-CoA kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-59  200.1   0.0    2.7e-59  199.8   0.0    1.1  1  CoaE      Dephospho-CoA kinase
    0.00044   20.4   0.0      0.003   17.7   0.0    2.3  1  AAA_33    AAA domain
     0.0012   19.4   0.1     0.0062   17.1   0.1    2.1  1  AAA_18    AAA domain
     0.0074   16.6   0.0      0.012   15.9   0.0    1.4  1  AAA_22    AAA domain
  ------ inclusion threshold ------
      0.012   16.1   0.0      0.084   13.3   0.0    2.2  2  AAA_17    AAA domain
      0.019   14.9   0.0      0.029   14.3   0.0    1.3  1  PRO8NT    PRO8NT (NUC069), PrP8 N-terminal domain
      0.027   14.9   0.0      0.051   14.0   0.0    1.5  1  RAMA      Restriction Enzyme Adenine Methylase Associated
      0.038   14.1   0.0        0.2   11.8   0.0    2.0  2  SKI       Shikimate kinase
      0.046   13.5   0.0      0.096   12.4   0.0    1.6  1  PRK       Phosphoribulokinase / Uridine kinase family
       0.16   11.8   0.3       0.23   11.3   0.3    1.2  1  GspL_C    GspL periplasmic domain
       0.16   12.2   0.0       0.32   11.2   0.0    1.5  1  AAA_28    AAA domain


Domain annotation for each model (and alignments):
>> CoaE  Dephospho-CoA kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  199.8   0.0   1.7e-62   2.7e-59       1     176 [.       2     182 ..       2     185 .. 0.98

  Alignments for each domain:
  == domain 1  score: 199.8 bits;  conditional E-value: 1.7e-62
                 EEEEEEESTTSSHHHHHHHHHH.TT-EEEEHHHHHHHTTCCTHHHHHHHHHHHGGGCB.TTSSE-HHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH CS
        CoaE   1 livgltGgiasGKstvanlfad.lgvpivDaDlvArqvvepgsealkkiveeFgeeildedGeLdReaLrkkvFadpeekkaLnallhPlirreikkel 98 
                 +i+gltG ia+GK+tv++ f++ + vp++DaD++Ar+vvepg++ l++i++eFg+e++  dG+L+R  L+k +F+ p+++k+Ln+++hP++r+++ k+l
  EPX71982.1   2 YIIGLTGSIATGKTTVSKQFHEkYHVPVIDADILARKVVEPGTSCLRQIRKEFGQEVILPDGNLNRPELGKIIFETPSKRKLLNSIVHPAVRKAMLKDL 100
                 69*******************99**************************************************************************** PP

                 HH--S...SEEEEE-TTTTTTTGGGGSSEEEEEE--HHHHHHHHHHCC.TSTHHHHHHHHHHS--HHHHHHH-SEEEE-.SS CS
        CoaE  99 akles...kyvlldvPLLvEkqlekliervlvvdvelelqveRlvard.gvseeevkaiiaaQlseeerlaladvvldNdss 176
                  +++     +v+ldvPLL+E+++++++ +++ v+ + e+q +Rl++r+ + s+e++ ++i++Q + +e+  lad+v+dN+s+
  EPX71982.1 101 FYYYItghGMVILDVPLLFEAKMHSICWKTICVASSIETQKRRLLKRNpEYSSEDADRRIQSQTPIQEKEYLADYVIDNNSD 182
                 999987889***************************************9******************************987 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   1.8e-06     0.003       4      40 ..       6      42 ..       3     164 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 1.8e-06
      AAA_33  4 lvGlpGsGKstlaerllkklgavllssdtlrrrlfgt 40
                l G  ++GK+t++++ ++k ++ +++ d+l r++++ 
  EPX71982.1  6 LTGSIATGKTTVSKQFHEKYHVPVIDADILARKVVEP 42
                679999***********************99999862 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.1   3.8e-06    0.0062       1     114 [.       4     148 ..       4     164 .. 0.60

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 3.8e-06
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf....................gvnlrdvakenglllevdpe........aldeskrldedkldklldaleenss.. 69 
                 I+ltG +++GKtt++k   ++ ++                     ++ ++  +e  l +++ +         +++++++l    ++ ++++ +  +   
  EPX71982.1   4 IGLTGSIATGKTTVSKQFHEKYHVpvidadilarkvvepgtsclRQIRKEFGQEVILPDGNLNRpelgkiifETPSKRKLLNSIVHPAVRKAMLKDLfy 102
                 89****************999555788885555555555555553333333333333333333344555666666666666666666666655555577 PP

      AAA_18  70 aleegknlvidghlaele.seaakdikkvvLtaspeelleRlekRg 114
                  +  g+  vi +++  +e ++  + +k++++  s e+ ++Rl kR+
  EPX71982.1 103 YYITGHGMVILDVPLLFEaKMHSICWKTICVASSIETQKRRLLKRN 148
                 4444444444444444443666666666888888888888888887 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   7.4e-06     0.012       7      91 ..       3      97 ..       1     114 [. 0.77

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 7.4e-06
      AAA_22  7 ilvvtGesGtGKTtllrrlleqldeeakaeeerpevv.......fvtlpsstsskdllrellralglelka...........erlsseell.ealeqalra 88
                i+ +tG   tGKTt+ ++++e++         +++v+       +v  p+ + ++++++e+ +++ l+  +           e+ s++ ll + ++ a+r+
  EPX71982.1  3 IIGLTGSIATGKTTVSKQFHEKY---------HVPVIdadilarKVVEPGTSCLRQIRKEFGQEVILPDGNlnrpelgkiifETPSKRKLLnSIVHPAVRK 94
                4557777779*************.........788887777789999999999************999999999999999999999999984444444444 PP

      AAA_22 89 rav 91
                ++ 
  EPX71982.1 95 AML 97
                444 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   5.2e-05     0.084       5      48 ..      11      56 ..       5     162 .. 0.75
   2 ?    0.3   0.0      0.52   8.4e+02      53      67 ..     148     162 ..     130     231 .. 0.55

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 5.2e-05
                TSSHHHHHHHHHHHHTEEEEEHHHHHHHHHHTTT...SHSSHHHHCT CS
      AAA_17  5 GsGKgtqceklvekygfthlsaGdllreeakrgg...lakardemrk 48
                  GK+t++++  eky+++++ a d+l   + + g   l + r+e+ +
  EPX71982.1 11 ATGKTTVSKQFHEKYHVPVIDA-DILARKVVEPGtscLRQIRKEFGQ 56
                57*******************5.777666666653444666666664 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.52
                 HHHHHHHHHHHHHHH CS
      AAA_17  53 ekkelqkeaaekiae 67 
                   +   + a ++i+ 
  EPX71982.1 148 NPEYSSEDADRRIQS 162
                 233333444444444 PP

>> PRO8NT  PRO8NT (NUC069), PrP8 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   1.8e-05     0.029      32     131 ..      70     172 ..      48     189 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.8e-05
                 HHHHTTSHHHHHHHHTT---TT-S--B--EE..EETTT--EEE-----B-HHHHHH.HHHHHHHHHHHHHHTTS------SS-S-SSS----H.HHHHH CS
      PRO8NT  32 lgalkylPhavlkllenmpmpweevrevkvl..yhvtgaitfvneiprviepvyla.qwstmwiamrrekrdrrhfkrlrfppfddeeppldyadnild 127
                 lg++ +   +  kll+++++p  +   +k l  y +tg   ++ ++p + e   ++  w t+ +a + e+++rr +kr    + +d ++ ++ +  i++
  EPX71982.1  70 LGKIIFETPSKRKLLNSIVHPAVRKAMLKDLfyYYITGHGMVILDVPLLFEAKMHSiCWKTICVASSIETQKRRLLKRNPEYSSEDADRRIQSQTPIQE 168
                 6666666667789*********99999985433889************9997655428********************988888888888988888888 PP

                 H--- CS
      PRO8NT 128 vepl 131
                  e l
  EPX71982.1 169 KEYL 172
                 7765 PP

>> RAMA  Restriction Enzyme Adenine Methylase Associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   3.1e-05     0.051      27      71 ..      31      80 ..       7      95 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 3.1e-05
        RAMA 27 lkdLleagllepGekllieykgrthk.AdlladGkIk....gqe.fgspsa 71
                 +d+l+++++epG+ +l ++ ++++   ++l+dG++     g+  f++ps+
  EPX71982.1 31 DADILARKVVEPGTSCL-RQIRKEFGqEVILPDGNLNrpelGKIiFETPSK 80
                4899*************.555566773556*******88887768****96 PP

>> SKI  Shikimate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00012       0.2       3      31 ..      12      40 ..      10      57 .. 0.86
   2 ?   -0.1   0.0      0.54   8.8e+02     118     135 ..     139     155 ..      95     189 .. 0.60

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00012
                SSHHHHHHHHHHHHTSEEEEHHHHHHHHH CS
         SKI  3 aGKstvGkllAkklglefiDlDeliekrt 31
                +GK+tv k++ +k+++++iD+D l  k++
  EPX71982.1 12 TGKTTVSKQFHEKYHVPVIDADILARKVV 40
                8*********************8877765 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.54
                 HHHHHHHHHHHHHHCCSS CS
         SKI 118 eelleelaereplyeeaa 135
                 +++++ l+ r+p y+  +
  EPX71982.1 139 TQKRRLLK-RNPEYSSED 155
                 33333333.333333321 PP

>> PRK  Phosphoribulokinase / Uridine kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   5.9e-05     0.096       1      27 [.       3      29 ..       3      57 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 5.9e-05
         PRK  1 vIgvagsSGaGkttvarklekifgrek 27
                +Ig++gs + Gkttv++++++      
  EPX71982.1  3 IIGLTGSIATGKTTVSKQFHEKYHVPV 29
                8******************99887443 PP

>> GspL_C  GspL periplasmic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.3   0.00014      0.23       8      43 ..     198     233 ..     192     239 .] 0.88

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00014
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
      GspL_C   8 rkvaillalallvvvaerllqlyqlerqaqalraqs 43 
                 r    +++++ll+ +++ llq+y+++rq ++ + q 
  EPX71982.1 198 RPSFVWTLACLLLPIMQVLLQAYHYSRQIKKAKNQK 233
                 5667899*********************99988775 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0    0.0002      0.32       3      44 ..       5      49 ..       3      61 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.0002
      AAA_28  3 vitGgestGKTtlleaLaar.gypvv..pEaareileeklakged 44
                 +tG   tGKTt++++++++  +pv+     ar+++e ++ + ++
  EPX71982.1  5 GLTGSIATGKTTVSKQFHEKyHVPVIdaDILARKVVEPGTSCLRQ 49
                589***************986899998444577777777666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       684  (0.0381505); expected 358.6 (0.02)
Passed bias filter:                      500  (0.0278878); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.50u 0.30s 00:00:00.80 Elapsed: 00:00:00.45
# Mc/sec: 1600.44
//
Query:       EPX71983.1  [L=1562]
Description: ribosome biogenesis protein Urb1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.3e-65  219.4   3.0    8.3e-65  219.4   3.0    2.3  2  Npa1      Ribosome 60S biogenesis N-terminal
    3.7e-42  144.2   5.8    3.7e-42  144.2   1.9    3.2  3  NopRA1    Nucleolar pre-ribosomal-associated protein 1


Domain annotation for each model (and alignments):
>> Npa1  Ribosome 60S biogenesis N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  219.4   3.0   9.2e-69   8.3e-65      36     338 ..      32     311 ..      12     312 .. 0.92
   2 ?   -1.9   1.1      0.19   1.7e+03      17      65 ..    1083    1134 ..    1066    1178 .. 0.42

  Alignments for each domain:
  == domain 1  score: 219.4 bits;  conditional E-value: 9.2e-69
        Npa1  36 shldfreeglelikriLqkhlkllyrnlssskeslisptLrLlteivsfdggalarevlrsfdfslkvlpklltprkrekkekkedkkkk...psiRtl 131
                 + l++ +++l+ i  iL++hlk lyrnl+s+++   ++tL++l++++s+++g ++  v+++fd+s kv++kll+++++ +++k++ k+ +   ++ R+ 
  EPX71983.1  32 T-LELDNSALRYIDAILNSHLKQLYRNLASNSP---LHTLSILRAMASWNNGVACGRVFQAFDWSGKVFTKLLQLSNQLNSSKRNVKRMRmasSKKRSS 126
                 3.6789999*********************988...67899999*****************************9988844444444443467799**** PP

        Npa1 132 firFllsflssgnpslkkdlLeqkkilsalfkglkeDppetvqevLetlkekvlkdkkikrstklklfnesaleklaslysrdeeedqdeedekeekes 230
                 fi +l++++++g ++++++l+++k+i + lfkg+ +D p +++++L++  ++++ d++++rstk+  fne+ l++l+slysr+ee++           +
  EPX71983.1 127 FILLLITLIRYGTQEVRTELINTKNITTPLFKGIYNDEPVVLKDLLQAWLTYIILDRNVSRSTKVFYFNEWSLNCLLSLYSREEEMN---------GVP 216
                 *************************************************************************************85.........579 PP

        Npa1 231 vaelvhefLlalctspgaGicfpdkgwypreasdeksaegsevtvnkksfkvyNklLlnllktLkpwederqqeLllkilkacPeLvapylketslsle 329
                 + e vh+f+l +ct pg G+cf++ gw  + +s+              +++vyN++L++ll +L  ++d +q+eL lkil+acP++ a++l++ sl+ e
  EPX71983.1 217 LYEHVHKFFLRACTVPGEGLCFSSVGWHAPPKSEA-------------NMNVYNRVLQSLLPSLHIYTDPLQRELCLKILSACPDISASFLERNSLNTE 302
                 **********************999**99976666.............5889*********************************************** PP

        Npa1 330 PrlsstWig 338
                 P+ls +Wi+
  EPX71983.1 303 PTLSFQWIC 311
                 ********8 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.19
        Npa1   17 eellsavlallalllrllsshldfreeglelikri...Lqkhlkllyrnlss 65  
                  +++   ++++l ll r++s++ ++ +++  +i  +   L++++ ++ +++s+
  EPX71983.1 1083 SKVSNVCSDILLLLTRVFSNNDNLDKSLFSFIDNFsvyLNENSASVEKGISK 1134
                  3333333344444445555543333333333332222233333333333333 PP

>> NopRA1  Nucleolar pre-ribosomal-associated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0      0.58   5.2e+03      88     100 ..     216     228 ..     211     233 .. 0.84
   2 ?   -2.6   0.1      0.39   3.5e+03     147     179 ..    1146    1178 ..    1112    1184 .. 0.66
   3 !  144.2   1.9   4.2e-46   3.7e-42       2     186 ..    1356    1528 ..    1355    1541 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 0.58
      NopRA1  88 plYekvnrfllsr 100
                 plYe+v++f+l+ 
  EPX71983.1 216 PLYEHVHKFFLRA 228
                 89*******9985 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.39
      NopRA1  147 kllkrrrvfelllslynsplldaklrelilell 179 
                  k ++ ++v+e +l l  s  +++   +++l+++
  EPX71983.1 1146 KHIQNKSVLEFILKLLFSIPSEQYNSSKVLQMM 1178
                  444555566666666666555555556666555 PP

  == domain 3  score: 144.2 bits;  conditional E-value: 4.2e-46
      NopRA1    2 gllvlsLssedeeirrlAlavlskllasleesssfkektqlllllselletllaskseeeekeprlpslialflaralriltnPehplYekvnrfll 98  
                  gl+++ Ls ++ ++r+++++ +++++  le+++  +e++ ++l ls++   +        ++++rl++l+a+f+a++++i+++P+h+++  +nr++l
  EPX71983.1 1356 GLIIMGLSLHNYQLRAACFHFIQHFILGLEDQK-LRERHLVKLTLSSIIVNVS-------TPNQRLSTLMANFYAQSVSIIMRPSHHMFLGINRYFL 1444
                  79***************************9999.***************9777.......5799********************************* PP

      NopRA1   99 srpeldlndvPlfysllyssseedeeykkersWiLrlladGlrtksDlkllkrrrvfelllslynsplldaklrelilelllratrie 186 
                  +r+ +d++d+P+fy+lly ss+    y k +sW+L ll  Gl++ +Dlkl+ rr+vfe +++ly+s ++++++re i ++llr+  + 
  EPX71983.1 1445 QRQHIDITDIPMFYELLYPSSD----YTKCLSWLLSLLLAGLQKGEDLKLYLRRHVFETICTLYESCVVNREIREAIAKILLRVDALG 1528
                  *********************9....8********************************************************98774 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1562 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       699  (0.0389871); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.85u 0.33s 00:00:01.18 Elapsed: 00:00:00.58
# Mc/sec: 8043.66
//
Query:       EPX71984.1  [L=129]
Description: proteasome maturation factor Ump1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-27   95.6   0.2    2.8e-27   95.3   0.2    1.1  1  UMP1      Proteasome maturation factor UMP1


Domain annotation for each model (and alignments):
>> UMP1  Proteasome maturation factor UMP1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.3   0.2   1.6e-31   2.8e-27      19     114 ..      30     123 ..      20     127 .. 0.86

  Alignments for each domain:
  == domain 1  score: 95.3 bits;  conditional E-value: 1.6e-31
        UMP1  19 sqlnssHpLesrlknweetqeklklemlrniyGlaePlrrqmElkivskterkPlalgs.snlhldiLtGkdesidfeDvlndpeeseevkdvhsem 114
                 ++l+++HpLe+rl nwe++q++++l+++r+iyGl+eP+rr+mEl++  ++  +P+alg+ sn+h diL+++++++d +D+++   +  + + +++e+
  EPX71984.1  30 NELENKHPLENRLANWEAQQRQVRLDSMRRIYGLHEPIRREMELRLSTQSV-RPMALGGpSNFHADILANREACLDETDIYTA--QAPMEMTFQNEV 123
                 6799******************************************99965.6*****966********************85..333334566665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       401  (0.022366); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.43
# Mc/sec: 900.34
//
Query:       EPX71985.1  [L=507]
Description: hypothetical protein SOCG_03919 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      0.004   17.5   2.8     0.0072   16.6   2.8    1.4  1  PNISR     Arginine/serine-rich protein PNISR


Domain annotation for each model (and alignments):
>> PNISR  Arginine/serine-rich protein PNISR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   2.8     4e-07    0.0072       8      82 ..      25     124 ..      22     196 .. 0.65

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 4e-07
       PNISR   8 kaLPAWireGLEKmerEKqkklererrekeraerrkeekkesskeeeeaknprnlakskfdsedeksdeeeeeg......................... 81 
                   LP Wi  +  K++rE+    e+e ++k++ e r+ + + +  ++++++    + k+ f s++e+  +   ++                         
  EPX71985.1  25 ENLPEWILPEAMKADRERHIRQEKEMKSKHDDEGRQMQSDRKYAKSKHEDIILGPPKLSFASSNENGRSIGRHDdllslgnvyngsavrhrngvpgpvp 123
                 57*************************999999999999999999999999999999999999987665554446776666666555555555555444 PP

       PNISR  82 a 82 
                 +
  EPX71985.1 124 T 124
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (507 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       706  (0.0393775); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.29s 00:00:00.83 Elapsed: 00:00:00.45
# Mc/sec: 3387.95
//
Query:       EPX71986.1  [L=665]
Description: phospholipase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      6e-28   98.5   1.1    3.1e-26   92.9   1.0    3.0  2  DDHD      DDHD domain


Domain annotation for each model (and alignments):
>> DDHD  DDHD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0      0.02   3.6e+02      61     113 ..     121     173 ..     116     290 .. 0.77
   2 !   92.9   1.0   1.7e-30   3.1e-26       1     219 [.     425     636 ..     425     639 .. 0.73

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.02
        DDHD  61 lEPLlepkfsklkPvsiprykrrkllhlelkesltsigaalkqkvsglvssls 113
                 l  +le+ ++++kP ++++ k  + l++e +e  + +++  ++  ++ +s+l+
  EPX71986.1 121 LAEILEEGYQQIKPYNVNWDKLESELEDENQERSSIFSSGRRKPSKDAISQLR 173
                 5667899999*******999998888777777766666666666677777766 PP

  == domain 2  score: 92.9 bits;  conditional E-value: 1.7e-30
        DDHD   1 ldFevedfFllGSPlGlflalrglera..................ktvkpald....vaqlkrpacqqlyNiFhpaDPvAyRlEPLlepkf.sklkPvs 76 
                 ++F+++ fF++G P+G+fl+l++++++                  k+v ++      + ++ + a++++yN+++  DP+A+Rl+P ++ ++ + + P  
  EPX71986.1 425 FKFDTNGFFCFGGPIGFFLLLNQKSIIprkgrgssrfpendeytsKNVPNS-YayaeNDRYGCLAVDSFYNVYNFLDPIAMRLNPTVDVNYsRGILPSR 522
                 89********************888778999********999886333333.247778999******************************8899**** PP

        DDHD  77 iprykrrkllhlelkesltsigaalkqkvsglvsslsallnrslelaeeesaslaessksherasesskasqeskaaesstasssaksskaeekvelek 175
                 + + ++ +       +s+ ++ ++ ++    lvs  +a ln+ ++ ++++s+ l +++++ e         q+++ ++    +++ak        +   
  EPX71986.1 523 LVYSRK-P-------SSILRVISRPNDAPIRLVSYQQA-LNQLKSDETGNSSILPDAEQDVE--------LQTRNFKH----EKRAK-------WR--- 590
                 999999.5.......46666666666665555555433.33333333333333333222222........22211111....11121.......22... PP

        DDHD 176 vralnwwgRiDYaLq..egaleaeylsavasHasYWeseDvalFll 219
                 +++ln++g+iDY+    +g+++++yl ++++H+sYW++eD++ Fl+
  EPX71986.1 591 MQELNENGQIDYVFTsqQGIISNKYLTMLSAHTSYWNNEDLVCFLV 636
                 467**********9875788999*********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (665 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       668  (0.0372581); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.29s 00:00:00.90 Elapsed: 00:00:00.45
# Mc/sec: 4488.58
//
Query:       EPX71987.1  [L=289]
Description: xap-5-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.3e-44  151.6   4.7    4.8e-44  151.1   4.7    1.3  1  XAP5            XAP5, circadian clock regulator
  ------ inclusion threshold ------
        3.1    8.0   6.5        1.2    9.2   1.7    2.4  2  RGS_DHEX        Regulator of G-protein signalling DHEX domain
          5    6.8   6.2        8.6    6.0   6.2    1.4  1  FAM176          FAM176 family


Domain annotation for each model (and alignments):
>> XAP5  XAP5, circadian clock regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.1   4.7   8.1e-48   4.8e-44       4     247 ..      37     274 ..      25     276 .. 0.77

  Alignments for each domain:
  == domain 1  score: 151.1 bits;  conditional E-value: 8.1e-48
        XAP5   4 kkkkskLSFgdddeeeeee..eekakkkeeeekkee...............sekkeekekeeeeee...............kkkkk...kkpnvdtsfl 67 
                 kk+k +LS ++++  ++++                +               +             +                 kkk   k+p+v+tsfl
  EPX71987.1  37 KKEKDALSQTNQKIKKKKSvlG-------------KnakkqfqlskgklsfD-------------QeenegemddglqktiI-KKKhlgKDPTVNTSFL 108
                 3444444443332222222221.............01122222222222221.............02222233345555542.333577********** PP

        XAP5  68 pkaldkereekeaaereeLrkeflalqeavkaeeieitfvfydGsnirrpgGvvrvkkgdtiwlfLdkarkeklrkerrelarv.svddLmlvkedlIi 165
                 p   d ere+ e+a+r+e rk++l++qe++k+eei i+f fy+Gs  r +   v+++ +d++ ++L + +     ++   l+rv  +d+++lv+ dlIi
  EPX71987.1 109 P---DAEREALEEAKRKEYRKQWLEEQERIKEEEILIPFLFYEGSTSRYS---VKIRLKDSVGHILSNMK-----DQIPSLKRVlDMDKFLLVQSDLII 196
                 *...*******************************************888...*************9996.....567888887479************ PP

        XAP5 166 PhhyefYdfivnkargksgpLFdvsedvrekkseekisdlegekddshatKvvdrrWYernKHifPasrWeefdpekdyeke 247
                 Phh+e+Y+f +nk +g+sg LF++++  +    ++ ++ ++ +  + ++  +v +++Y   +H+fP + We fd +kdy ++
  EPX71987.1 197 PHHHELYYFYLNKVQGPSGLLFEFESLRC----QNPEMAATLQLPEKKIPHLVPKSFYMEYRHVFPCNCWEMFDSRKDYASQ 274
                 ***********************998777....67778888999999999*****************************876 PP

>> RGS_DHEX  Regulator of G-protein signalling DHEX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   1.7   0.00021       1.2      19      72 ..      23      76 ..      13      84 .. 0.84
   2 ?    0.4   0.2      0.12   7.1e+02      17      36 ..     115     134 ..      93     141 .. 0.73

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00021
    RGS_DHEX 19 ylakrslrnkqrleeyekealnklqkllakkwefiimqaeeqlkvdkerkkadk 72
                +l      ++++ e+ ek+al++ ++++ kk   + ++a++q +++k +   d+
  EPX71987.1 23 HLEDYRRVKQGIAEKKEKDALSQTNQKIKKKKSVLGKNAKKQFQLSKGKLSFDQ 76
                55554445667799*********************************9876665 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.12
    RGS_DHEX  17 aiylakrslrnkqrleeyek 36 
                 a+  akr+  +kq lee+e+
  EPX71987.1 115 ALEEAKRKEYRKQWLEEQER 134
                 55567777777777887775 PP

>> FAM176  FAM176 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   6.2    0.0014       8.6      56     125 ..      60     131 ..      34     139 .. 0.66

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0014
      FAM176  56 kkkkklkeesekasededeeeeeeeedsseseaeeelsefertlsvnvftsa..eelerAqRlEeReriirE 125
                 ++kk+ + ++ k s d++e+e e ++  +++ ++++    + t++++   +a  e+le A+R E R + + E
  EPX71987.1  60 NAKKQFQLSKGKLSFDQEENEGEMDDGLQKTIIKKKHLGKDPTVNTSFLPDAerEALEEAKRKEYRKQWLEE 131
                 23333333333446667666666666666666666666777776666665554499**********998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1317  (0.0734564); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2027.77
//
Query:       EPX71988.1  [L=106]
Description: ER membrane protein complex subunit 6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.2e-20   73.0  10.6    2.7e-20   72.8  10.6    1.1  1  Rab5ip          Rab5-interacting protein (Rab5ip)
  ------ inclusion threshold ------
      0.092   12.9   0.2       0.37   11.0   0.0    2.0  2  Nuclease_act    Anticodon nuclease activator family
       0.18   11.0   0.0       0.23   10.7   0.0    1.1  1  FAE1_CUT1_RppA  FAE1/Type III polyketide synthase-like protei


Domain annotation for each model (and alignments):
>> Rab5ip  Rab5-interacting protein (Rab5ip)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.8  10.6   4.5e-24   2.7e-20       1      82 []      19      99 ..      19      99 .. 0.96

  Alignments for each domain:
  == domain 1  score: 72.8 bits;  conditional E-value: 4.5e-24
      Rab5ip  1 vlsnlrsltalllGvvaGilgLeslsGflfylllsllvsllfyalkvkgkskkyfrgalkelwteglvnglagFvLtWtlfY 82
                v+s++r++t +++G++aGilg++s+ G+lfyl+++l+vs+l+y++k++g+ +++++ +l ++w + +++g  +FvL+WtlfY
  EPX71988.1 19 VVSFIRNMTLSVFGCSAGILGITSYHGILFYLFSYLFVSFLIYTMKMGGNVREFYQPGL-KFWYAKVIEGAPSFVLFWTLFY 99
                6899**********************************************999877767.*********************9 PP

>> Nuclease_act  Anticodon nuclease activator family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   6.1e-05      0.37       2      24 ..      12      32 ..      11      33 .. 0.81
   2 ?   -1.6   0.0      0.64   3.8e+03       9      18 ..      69      78 ..      68      79 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 6.1e-05
  Nuclease_act  2 snFHnEHvmqFYRnnLKtKGvFG 24
                  s  HnE v+ F Rn   t  vFG
    EPX71988.1 12 SAVHNERVVSFIRNM--TLSVFG 32
                  678**********94..666666 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.64
  Nuclease_act  9 vmqFYRnnLK 18
                  v  FY   LK
    EPX71988.1 69 VREFYQPGLK 78
                  6689998887 PP

>> FAE1_CUT1_RppA  FAE1/Type III polyketide synthase-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   3.9e-05      0.23     120     153 ..       8      41 ..       4      49 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 3.9e-05
  FAE1_CUT1_RppA 120 slsamvvnryklredvksynLsgmGCsAglisid 153
                      +++  v++ ++ + ++++ Ls +GCsAg++ i 
      EPX71988.1   8 FVTESAVHNERVVSFIRNMTLSVFGCSAGILGIT 41 
                     55666666777778899**************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       465  (0.0259356); expected 358.6 (0.02)
Passed bias filter:                      210  (0.0117129); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.42
# Mc/sec: 764.54
//
Query:       EPX71989.1  [L=642]
Description: HAL protein kinase Oca2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      6e-45  153.7   0.0      1e-44  152.9   0.0    1.4  1  Pkinase        Protein kinase domain
      2e-20   73.1   0.0    3.1e-20   72.6   0.0    1.2  1  Pkinase_Tyr    Protein tyrosine kinase
     0.0013   18.7   0.0      0.003   17.5   0.0    1.5  1  APH            Phosphotransferase enzyme family
      0.002   17.2   0.0      0.002   17.2   0.0    2.4  2  Haspin_kinase  Haspin like kinase domain
  ------ inclusion threshold ------
      0.017   14.8   0.0        4.3    6.9   0.0    2.4  2  FTA2           Kinetochore Sim4 complex subunit FTA2
      0.073   12.4   0.0       0.24   10.7   0.0    1.7  2  Kinase-like    Kinase-like


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.9   0.0   3.5e-48     1e-44       4     264 .]     299     606 ..     297     606 .. 0.88

  Alignments for each domain:
  == domain 1  score: 152.9 bits;  conditional E-value: 3.5e-48
                 EEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH...HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHH CS
     Pkinase   4 leklGeGsfGkVykaveketgkivAvKkikkekakkkke...kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseee 99 
                  + lG+G+ G+V  ++++++gki+AvK+++ ++ +++++   +kv++E  +   l+h ni++ ++++ee+++++ v+ey++ + +++++  +g+++  e
  EPX71989.1 299 GRILGSGAGGSVRIMKRSSDGKIFAVKEFRSRRPSESEReyaRKVTAEFCVGSALHHTNIIETLDIIEENKKFFEVMEYAPYD-MFSIVM-SGQMTLPE 395
                 578****************************9999988889999*************************************88.555553.57788888 PP

                 HHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.....BCTTTSCGGGS-HHHHTTSCB.SHHHHHHHHHHHHHHHHH CS
     Pkinase 100 akkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.....ltsfvgtseYlAPEvlkeney.skkvDvWslGvilyellt 192
                 +   +kq+l+g++ylHs+g+ HrDlK +N+ +de+ ++Ki+DFG a  ++   +     +t +vg+  YlAPE l+++ y  ++vD+Ws+++i  ++  
  EPX71989.1 396 IYCCFKQLLSGVAYLHSMGLAHRDLKLDNLVVDENCNIKIIDFGSAVVYKYPFEadiveATGVVGSDPYLAPETLTKKLYdPRAVDIWSCAIIYCCMAL 494
                 9999**********************************************998899999****************999997889*************** PP

                 SS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS...............................................-HHHHHHHHHH CS
     Pkinase 193 gkppfsgekgkekvekeldqlekilkilgetkeklpeasei...............................................seeakdllkkl 244
                 ++ p++       + k  d+ ++++ i+ +tk ++ e++ +                                               +++ +  +  +
  EPX71989.1 495 RRFPWK-------YPKLSDNSFRLFCIIPPTKGDFSEEEVLksikdrglvdpghpsykppntqqrsehqvhaggkqevygpwrllrllPRDTRAAVLHM 586
                 ******.......23344445556667776666666666666678888999999999999999999999999999999999999999988888889999 PP

                 T-SSGCCSTTHHHHHTSGGG CS
     Pkinase 245 lkkdpkkRltaeellqhpyl 264
                 l+ dp +R+ ++++ +++++
  EPX71989.1 587 LDLDPVRRYDIHSVFADDWI 606
                 99999999999999988886 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.6   0.0     1e-23   3.1e-20       3     195 ..     298     489 ..     296     510 .. 0.84

  Alignments for each domain:
  == domain 1  score: 72.6 bits;  conditional E-value: 1e-23
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHH....HHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTC CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateee....keelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkke 96 
                  +g+ lG+Ga G+V   + +    ++    avK ++++  +e+     ++++ e  + ++l+h ni++ l ++ ++++ + v+ey+++  ++  +  + 
   EPX71989.1 298 FGRILGSGAGGSVRIMKRS----SDGKIFAVKEFRSRRPSESereyARKVTAEFCVGSALHHTNIIETLDIIEENKKFFEVMEYAPYDMFSIVMSGQ- 390
                  7889999999999876666....777889****975433333112367888899999******************************9888888776. PP

                  TTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEET..TTSSEEEETTSSTSGGGGS-HHHHHHSEEE.HHHHHHHH CS
  Pkinase_Tyr  97 kekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardi..ekddeyvkkeeaklpvkWmapEslkekkft.sksDvWsf 191
                     +tl +++++  q+ +G++yL+s+ l Hrdl   N +++en  +ki DfG a       + + v++++   +  ++apE+l++k +   + D+Ws 
   EPX71989.1 391 ---MTLPEIYCCFKQLLSGVAYLHSMGLAHRDLKLDNLVVDENCNIKIIDFGSAVVYkyPFEADIVEATGVVGSDPYLAPETLTKKLYDpRAVDIWSC 485
                  ...*************************************************88766312345558888888999************983467****9 PP

                  HHHH CS
  Pkinase_Tyr 192 Gvll 195
                  +++ 
   EPX71989.1 486 AIIY 489
                  8865 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   9.9e-07     0.003     162     198 ..     406     443 ..     390     451 .. 0.80

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 9.9e-07
                 S...SS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-EE CS
         APH 162 g...elptvllHgDlhpgNllvdpddgrvtGviDfedagl 198
                 g     +++l H+Dl+++Nl+vd ++  +  +iDf+ a++
  EPX71989.1 406 GvayLHSMGLAHRDLKLDNLVVD-ENCNI-KIIDFGSAVV 443
                 355566899**************.66665.7*****9975 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -9.6  11.7         6   1.8e+04       2      38 ..     230     270 ..     216     288 .. 0.63
   2 !   17.2   0.0   6.6e-07     0.002     228     254 ..     415     441 ..     394     450 .. 0.89

  Alignments for each domain:
  == domain 1  score: -9.6 bits;  conditional E-value: 6
  Haspin_kinase   2 ssslsleslksrssqs..slkhktshssLq..kf....ssssses 38 
                    ssslsl+sl +   ++  s kh   hssL+  +f    +    +s
     EPX71989.1 230 SSSLSLKSLLHSHDKHdkSDKHEKHHSSLDlrRFfkshQ----KS 270
                    578888888877666511455666788864226643331....22 PP

  == domain 2  score: 17.2 bits;  conditional E-value: 6.6e-07
  Haspin_kinase 228 FEHRdLhldniLvdknlnvtlidlkls 254
                    + HRdL+ldn  vd+n n+ +id+  +
     EPX71989.1 415 LAHRDLKLDNLVVDENCNIKIIDFGSA 441
                    67*********************9765 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.0    0.0014       4.3      25      82 ..     297     356 ..     283     361 .. 0.81
   2 ?    5.4   0.0    0.0042        12     178     214 ..     400     441 ..     382     442 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0014
        FTA2  25 efleyLgkglhs..iVlkvkirgkeYALKlFrfleaeeleeaeedlkiprealkelasys 82 
                 +f  +Lg+g+ +  +++k   +gk++A+K Fr  +++e e++++++ + ++++ ++ +++
  EPX71989.1 297 KFGRILGSGAGGsvRIMKRSSDGKIFAVKEFRSRRPSESEREYARKVTAEFCVGSALHHT 356
                 56677866555544899*******************999988888888887777776665 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.0042
        FTA2 178 lpkllrdlkklhklgIvvrDlkeenyi.....dgkLvDlsaa 214
                 +++ll+ +  lh+ g+ +rDlk +n++     + k++D+++a
  EPX71989.1 400 FKQLLSGVAYLHSMGLAHRDLKLDNLVvdencNIKIIDFGSA 441
                 7899*********************97443335588888887 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       0.8   2.4e+03      31      94 ..     313     369 ..     297     397 .. 0.70
   2 ?   10.7   0.0     8e-05      0.24     153     197 ..     403     447 ..     396     479 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 0.8
  Kinase-like  31 vkdqetgeplavkvfllps.easkkdlerlkeqelairllrgknpeqAkdhlrlllpfdlvkiqk 94 
                   k    g+ +avk f +     s++++ r   +e+ +          A +h+ ++   d+ + +k
   EPX71989.1 313 MKRSSDGKIFAVKEFRSRRpSESEREYARKVTAEFCVGS--------ALHHTNIIETLDIIEENK 369
                  455555667777777777767777777777777777777........777777777777755443 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 8e-05
  Kinase-like 153 lirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtk 197
                  l+  +a+L++ gl h +++ dnl+ de+  +++ +f++ v ++  
   EPX71989.1 403 LLSGVAYLHSMGLAHRDLKLDNLVVDENCNIKIIDFGSAVVYKYP 447
                  56669*******************************998877755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (642 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       855  (0.0476881); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.64u 0.29s 00:00:00.93 Elapsed: 00:00:00.46
# Mc/sec: 4165.78
//
Query:       EPX71990.1  [L=684]
Description: wybutosine biosynthesis protein Tyw1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.3e-24   85.0   0.0    7.6e-24   83.8   0.0    1.7  1  Wyosine_form  Wyosine base formation
    3.8e-24   86.0   0.1    1.2e-23   84.3   0.0    1.9  2  Radical_SAM   Radical SAM superfamily
    2.3e-15   57.1   0.0    4.3e-15   56.2   0.0    1.5  1  Flavodoxin_1  Flavodoxin
  ------ inclusion threshold ------
      0.099   12.4   1.4        0.2   11.4   1.4    1.5  1  DUF658        Protein of unknown function (DUF658)


Domain annotation for each model (and alignments):
>> Wyosine_form  Wyosine base formation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.8   0.0   1.7e-27   7.6e-24       2      63 .]     535     605 ..     534     605 .. 0.91

  Alignments for each domain:
  == domain 1  score: 83.8 bits;  conditional E-value: 1.7e-27
                   HT-SEEEEEE--------.----------HHHHHHHHHHHHTSSS.........EEEEEEETTTTEEEEEE CS
  Wyosine_form   2 aepdFvEvKaytyvGssr.srLtmknvPwheevadfakrlegsae........dYellaehrhSrvvllar 63 
                   + p+F+E+K++ty+G+s+ s+LtmknvP++eev+df+k+l +++         +Ye++aeh+hS++ l+a+
    EPX71990.1 535 GVPCFIEIKGVTYSGNSDqSPLTMKNVPYYEEVVDFTKKLIENIDkylgdlgvKYEIAAEHAHSCSLLVAQ 605
                   89************************************777777667777777***************997 PP

>> Radical_SAM  Radical SAM superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.3   0.0   2.6e-27   1.2e-23       3     167 .]     352     532 ..     350     532 .. 0.92
   2 ?   -3.4   0.0       2.4   1.1e+04     122     143 ..     559     579 ..     556     593 .. 0.74

  Alignments for each domain:
  == domain 1  score: 84.3 bits;  conditional E-value: 2.6e-27
                  EESEESS--TTTSCCTT..HHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEE.....................SSTGGGSTTHHHHHHHHHHTCCCT CS
                  xxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....................xxxxxxxxxxxxxxxxxxxxxxxx RF
  Radical_SAM   3 vtrgCnlrCsfCarpet..vrregrgrslsveeileevkelkaekgvkevilg.....................ggepllypdfvellerlaklavpg 77 
                  ++ +C+++C+fC+r+ t  v++e+r+++ ++e i++ v e + +   k +  +                      gep++yp + e++ +l+++   +
   EPX71990.1 352 PSLACANKCTFCWRHGTnpVGTEWRWKVDPPELIMKGVLESH-YAKLKLMRGVpgvrqdrfleasrvrhcalslVGEPIFYPYINEFVGMLHER---E 445
                  6779*************************************8.2224444444888999999999999999999*******************8...* PP

                  EEEEEEECSSCHGHHHHHHHHHTT.-SEEEEEEBSSSHH...HHHHHHTCTSHHHHHHHHHHHHHHTTSETEEEEEEEBTTTSHHHHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Radical_SAM  78 iritvetngtlpdeeklerllelg.vdrvslgleaadde...kvlklmnrghtfeevlealeklreagikrvvdrivglpGendeeleellell 167
                  i+ +++tn+ +p     e+++++g v++++++++a ++     v +++  ++ +e++l +le+lre+  + +v+r+++++G+n+e+++e+ el+
   EPX71990.1 446 ISSFLVTNAQHP-----EAFRKMGmVTQLYVSIDASTKQslkSVDRPL-FKDFWERLLTCLEILREKKQR-TVYRMTLVKGFNMEQIKEYTELI 532
                  ************.....**********************99999****.******************999.******************98875 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2.4
                  TCTSHHHHHHHHHHHHHHTTSE CS
                  xxxxxxxxxxxxxxxxxxxxxx RF
  Radical_SAM 122 nrghtfeevlealeklreagik 143
                  +  + +eev++ ++kl e+ i+
   EPX71990.1 559 KNVPYYEEVVDFTKKLIEN-ID 579
                  4567889999999999887.66 PP

>> Flavodoxin_1  Flavodoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.2   0.0   9.6e-19   4.3e-15       1     140 [.      92     238 ..      92     241 .. 0.77

  Alignments for each domain:
  == domain 1  score: 56.2 bits;  conditional E-value: 9.6e-19
                   EEEETSSSHHHHHHHHHHHHHHHTTTEEEEEEEEGTTSC.....GGGGGTHSEEEEEEEEETTTBEEGGGH..HHHHHHHHHHCHHGCCSTTTTE.E CS
  Flavodoxin_1   1 ilYgSetGnteklAkqlaeelgehgfnadvvslsdydes.....lseieeealllvvtsTfgnGdppenge..sffqdllelkgdeledgdlsgv.r 89 
                   i+Y++  G+++ +A++++++++   ++ d ++l  +d+      + +++e+a+ l++ + +   + + +    + ++ +++++ +   + +l+++  
    EPX71990.1  92 IFYATLGGTAQRYANEVHKLMS-TNLQRDDLQLLSLDYIdleeyFLSCPENAVYLIILPSYA-IESSIDFYlsTLRETFYDFRVQ---KNPLEKLsG 183
                   8********************9.677788888888887777788777887666666666555.5555555545666677777754...445555426 PP

                   EEEEEEECTTSSS...TTHHHHHHHHHHHHTTCEEESSSEEEETTST.HGHHHHH CS
  Flavodoxin_1  90 favfglGdsayen...FcaagkkldekleelGaerllkllegdednq.egqeeaf 140
                   +avfglGd+ +++   Fc+ + + d++l++lGa+r+ +++  + + + ++q + +
    EPX71990.1 184 YAVFGLGDMDNYPgdmFCYQAIQTDKWLSKLGASRIAPMGVTNSQLApATQVDVL 238
                   9*************************************99888777666665555 PP

>> DUF658  Protein of unknown function (DUF658)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   1.4   4.4e-05       0.2     138     182 ..      40      82 ..      31      86 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 4.4e-05
      DUF658 138 llsvsseeelietkekerrkhetkeerrlrrniraqmaieaarke 182
                  l+vssee+l   keke  kh+   +r  r+n+++++   ++++e
  EPX71990.1  40 QLAVSSEENL--PKEKENTKHKKTVKRFTRKNVKSKLVQSNSQNE 82 
                 589******9..6999999**99999**********998888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (684 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       793  (0.04423); expected 358.6 (0.02)
Passed bias filter:                      519  (0.0289475); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.67u 0.29s 00:00:00.96 Elapsed: 00:00:00.45
# Mc/sec: 4543.99
//
Query:       EPX71991.1  [L=236]
Description: haloacid dehalogenase-like hydrolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.9e-22   78.0   0.0    1.1e-21   77.7   0.0    1.1  1  HAD_2           Haloacid dehalogenase-like hydrolase
    8.5e-10   39.3   0.0    3.7e-08   33.9   0.0    2.0  1  Hydrolase       haloacid dehalogenase-like hydrolase
    8.4e-06   25.8   0.0     0.0016   18.5   0.0    2.2  2  Hydrolase_6     Haloacid dehalogenase-like hydrolase
  ------ inclusion threshold ------
      0.015   15.7   0.0      0.022   15.2   0.0    1.3  1  HAD             haloacid dehalogenase-like hydrolase
      0.052   13.6   0.0      0.088   12.9   0.0    1.3  1  Hydrolase_like  HAD-hyrolase-like


Domain annotation for each model (and alignments):
>> HAD_2  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.7   0.0   3.1e-25   1.1e-21       1     178 []       6     201 ..       6     201 .. 0.91

  Alignments for each domain:
  == domain 1  score: 77.7 bits;  conditional E-value: 3.1e-25
       HAD_2   1 iiFDlDgTlldteeliiqafnelleeyglselseeelrkliglslrellrklgeseeeeekieellrkyneekkk..kevkpydgvkelLeeLkeagyk 97 
                 ++FD+Dg+lldte+++ +++n +le+y+ + ++ e  ++++g ++re+ + + +  + + ++e++++  +e + +  k+++p++g+ elL + k  ++ 
  EPX71991.1   6 CLFDMDGLLLDTETIYTKSTNIILERYQKGPFPMEIKAQMMGRPSREACQIFLDWSKLDLSYEQYVQMQRELQSElwKQTQPLPGALELLRQCKTLNIP 104
                 69****************************************************999999*****999999999999********************** PP

       HAD_2  98 lgivTsksreaveekleqlg.iesyF.dvivtsedv....ekkKPdpeviekalekl..........klkkeeviyvGDsptDieaakkagikviav 178
                 + ++Ts+++ ++e+k  +l  +  +F + ivt++d     ++ KP+p++   ale            +++++++++++Ds+ ++e++++a +kvi+v
  EPX71991.1 105 MVLATSSDTYNFERKTGHLRdMFMLFeNNIVTGDDDrllpGRGKPNPDIWFIALEVIneklrsknepEVEAKDCLVFEDSILGLESGRAADMKVIWV 201
                 ***************9999723344446799999863333567*****9999988777788999999*****************************8 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   0.0     1e-11   3.7e-08       2     210 .]       4     195 ..       3     195 .. 0.75

  Alignments for each domain:
  == domain 1  score: 33.9 bits;  conditional E-value: 1e-11
                 SEEEEESBTTTBCHHHHHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHETTTEHHHHTHHHHHHHHHCHHHHHHHHHHHHHHCHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase   2 ktvvfDkdGTLttgepsvedvivsaalalaaaletgsehpigkalvaaakarsgaltgfatfigrgayaigkpewltaldippdlgaaigsaqsqgrtv 100
                 k+++fD+dG L+++e   ++ ++ +                     + +++ +++ +  a+        + ++e  +       l+    ++  +   +
  EPX71991.1   4 KACLFDMDGLLLDTETIYTKSTNII--------------------LERYQKGPFPMEIKAQ-----MMGRPSREACQIF-----LDWSKLDLSYEQYVQ 72 
                 8999********9998888888888....................3444444455544444.....2233333333333.....111122222233333 PP

                 HHHTTHHHHHHHHHHTHHBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTT..GGGE.SEEEEHHCES....STTTSHHHHHHHHHHHT..... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxx.xxxxxxxxxx....xxxxxxxxxxxxxxxxx..... RF
   Hydrolase 101 allqaralavftiadplkvkpeaaeavasLkaagievvlltgdnpetaeraanqlG..ddyf.daviasdiet....vakpspegkvaaireLq..... 187
                 +    ++  +++ + +  + p+a e++++ k  +i++vl+t+++  + er   +l   +  f ++++++d++      +kp+p++   a++ ++     
  EPX71991.1  73 MQ--RELQSELWKQTQ--PLPGALELLRQCKTLNIPMVLATSSDTYNFERKTGHLRdmFMLFeNNIVTGDDDRllpgRGKPNPDIWFIALEVINeklrs 167
                 33..366666666666..*******************************88888777*999989999999999********************888999 PP

                 .....STGGGEEEEESSHHHHHHHHHTT CS
                 .....xxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 188 .....gkpeevamVGDgvnDaaalaaAg 210
                      ++ +++++++D++ +++ ++aA+
  EPX71991.1 168 knepeVEAKDCLVFEDSILGLESGRAAD 195
                 9999999*******************98 PP

>> Hydrolase_6  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.1   0.0    0.0069        25       2      23 ..       7      28 ..       6      44 .. 0.86
   2 !   18.5   0.0   4.4e-07    0.0016       9      54 ..      81     126 ..      78     137 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0069
                 EEESTTTSEETTEE-TTHHHHH CS
  Hydrolase_6  2 lfDidGvLwrgdkaipgaaeal 23
                 lfD+dG L++ ++++ ++ +++
   EPX71991.1  7 LFDMDGLLLDTETIYTKSTNII 28
                 8**********99998877665 PP

  == domain 2  score: 18.5 bits;  conditional E-value: 4.4e-07
                  SEETTEE-TTHHHHHHHHHHTT-EEEEEE---SS-HHHHHHHHHHT CS
  Hydrolase_6   9 LwrgdkaipgaaealnalraagkpvvllTNnsskseeeyakklekl 54 
                  Lw++++++pga e+l++++  ++p+vl T + + + e    +l+++
   EPX71991.1  81 LWKQTQPLPGALELLRQCKTLNIPMVLATSSDTYNFERKTGHLRDM 126
                  9*****************************9999988888888776 PP

>> HAD  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.0   6.1e-06     0.022       2     137 ..       7     141 ..       6     184 .. 0.61

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 6.1e-06
         HAD   2 lfDfDgTLldgdsle.....lllrfllrrgaprlwralreklllalfrellrldraglaelleallagls.eelaaelerfv.aevirpklldpgalel 93 
                 lfD+Dg Lld+++++      +l+ +++           ++++++ +  ++r +r++++ +l+    +ls e+  +  ++++ + +++++   pgalel
  EPX71991.1   7 LFDMDGLLLDTETIYtkstnIILE-RYQ---------KGPFPMEIKAQMMGRPSREACQIFLDWSKLDLSyEQYVQMQRELQsELWKQTQ-PLPGALEL 94 
                 899999999999998666543333.333.........33344444444455555555555555555555533333333333322222222.449***** PP

         HAD  94 laahraaGdrvvvvSgglrplvepllaelg.adevlatelevdd..r 137
                 l++++  +++ v+ +++  ++ e++  +l     +  + + + d  r
  EPX71991.1  95 LRQCKTLNIPMVLATSSDTYNFERKTGHLRdMFMLFENNIVTGDddR 141
                 *******************9999999766654444444433333343 PP

>> Hydrolase_like  HAD-hyrolase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   2.5e-05     0.088       3      48 ..     147     201 ..     145     203 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2.5e-05
                     STTSSHHHHHHHHHH..........---GGGEEEEES-TTTHHHHHHHCT-EEEEE CS
  Hydrolase_like   3 gKPepemydfalevl..........gsdpeevlmiGDrlatDiagAnnaGwksvLV 48 
                     gKP+p ++  alev+          +++ +++l+  D+    ++++++a +k + V
      EPX71991.1 147 GKPNPDIWFIALEVIneklrsknepEVEAKDCLVFEDS-ILGLESGRAADMKVIWV 201
                     9**************7777777666666999*******.99************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (236 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       347  (0.0193541); expected 358.6 (0.02)
Passed bias filter:                      312  (0.017402); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.42u 0.27s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 1754.14
//
Query:       EPX71992.1  [L=323]
Description: transaldolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.5e-98  327.2   0.4    9.7e-98  327.0   0.4    1.0  1  TAL_FSA   Transaldolase/Fructose-6-phosphate aldolase


Domain annotation for each model (and alignments):
>> TAL_FSA  Transaldolase/Fructose-6-phosphate aldolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  327.0   0.4  5.4e-102   9.7e-98       1     284 [.      15     314 ..      15     317 .. 0.95

  Alignments for each domain:
  == domain 1  score: 327.0 bits;  conditional E-value: 5.4e-102
                 EEEE---HHHHHHHHHTT---EEE--HHHHHH..T...TS.-HHHHHHHHHHH............................H-S-EEEE-S-...-SHH CS
     TAL_FSA   1 lvlDtadrelikklleekgiqgvTtNPsliekaik...ykalydeaieeikkeg....kkvkeaydkLavedilealdllgadgrvslEVdarlsddte 92 
                 +v Dt+d+e+i k+++    q++TtNPsli++a k   y+al+d+a+e +kk+g    +++++a+d+L +e+++++l ++  +grvs+EVdar+s+dt+
  EPX71992.1  15 VVSDTGDFESIAKYKP----QDATTNPSLILAASKkpqYAALVDAAVEFAKKKGgsleEQIENAFDRLLIEFGTKILAIV--PGRVSTEVDARFSFDTK 107
                 688*************....*************99*********************************************..***************** PP

                 HHHHHHHHHHTT-T.......TEEEEEESSHHHHHHHHHHHHTT--EEEEEE-SHHHHHHHHHHT-SEEEEBHHHHHTTT............S-HHHHH CS
     TAL_FSA  93 atieeArrlialye.....renvlIKiPateeGikAikeLkkeGinvnvTliFsleqalaaaeagasviSpFvgRiddllkkleekdklkgkddgvalv 186
                  tie+Ar+li+lye     re++lIKi++t eGi+A+k+L++eGi++n+Tl+Fs+ qa+a+aea++++iSpFvgRi+d +k+++++++ +++d+gv +v
  EPX71992.1 108 TTIEKARQLIKLYEeegikRERILIKIASTYEGIQAAKQLEQEGIHCNLTLLFSFVQAVACAEANVTLISPFVGRILDFFKAKNNREYASHEDPGVLSV 206
                 ********************************************************************************9999999************ PP

                 HHHHHHHHHHT-S-EEEEBS--SHHHHHHHHT-SEEEE-HHHHHHHT--HHH.............................................HH CS
     TAL_FSA 187 keiynyykklgysTkvmaasfrnveeveelagcdtvTippkllealakhgkt.....seklee.....eeiek....lleklfrlginedavaeellde 271
                 ++iynyykk++y+T vm+asfrnv e++elag d +Ti+p+lle+l+++++      +    +      +iek     +e+ fr+++n d++a+ +l+ 
  EPX71992.1 207 SQIYNYYKKFNYKTIVMGASFRNVGEIHELAGVDFLTISPALLEQLNNSQEPvpkklD----AsqahgLDIEKvsflNDESRFRFNFNNDEMAVVKLAT 301
                 *************************************************999666542....3323458888888888999****************** PP

                 HHHHHHHHHHHHH CS
     TAL_FSA 272 gikkFakdlekll 284
                 gi +Fakd+++l 
  EPX71992.1 302 GISAFAKDADTLR 314
                 *********9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       725  (0.0404373); expected 358.6 (0.02)
Passed bias filter:                      576  (0.0321267); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2275.10
//
Query:       EPX71993.1  [L=508]
Description: phosphoprotein phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.4e-21   77.2   0.0    3.9e-21   76.5   0.0    1.3  1  Metallophos    Calcineurin-like phosphoesterase
    4.8e-06   26.9   0.0    1.9e-05   24.9   0.0    1.9  1  Metallophos_2  Calcineurin-like phosphoesterase superfamily d
  ------ inclusion threshold ------
       0.04   14.6   2.9      0.085   13.6   2.9    1.4  1  Ribosomal_S12  Ribosomal protein S12


Domain annotation for each model (and alignments):
>> Metallophos  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.5   0.0   6.4e-25   3.9e-21       1     203 [.     207     437 ..     207     438 .. 0.78

  Alignments for each domain:
  == domain 1  score: 76.5 bits;  conditional E-value: 6.4e-25
                  EEEEEEESBTB................TTCCTHHHHHHHHHHHHHHHTTESEEEEESTSSSSS...HHHHHHHHHHHHHHHHTSEEEEEC-TTS..CH CS
  Metallophos   1 lrilvigDlHl................algggqlddllkllddllreekpdlvllaGDlvdrg...dlekellellaalvkypipvylllGNHe..gf 77 
                  l+il+++DlH+                + + ++  + + +++ ++re  pdlvl++GDl+++    d  ++l++ la++v+y ip++++ GNH+  g 
   EPX71993.1 207 LKILQLSDLHYstelakcrdsypperpSNCMADATTNAFVIELIKRE-SPDLVLFTGDLINGDtveDSKTSLMKALAPVVDYEIPFAVAYGNHDslG- 302
                  69***********************9999999999999999999888.**************9999888889**********************441. PP

                  HHHHHHHHHHHHHHHHHHEHHHCEEETSEEEEEETTE............EEEEEEESECEEETHHHHHHHHHHHSCHHHHCCHHHHHH.HHHHTTCSE CS
  Metallophos  78 eeellnkygylgifsepwrsdaevfnnlplaslgsgs............lkvlllhGgspellvsldklgslnleleapepgdewlkd.lekrekadw 162
                          ++ g+ + +++ +    +n+ l++ +sg             ++vl  h+g       +++ +  ++++ ++ ++  wlk  ++++e++++
   EPX71993.1 303 ------DLANDGLAQIVNQVP----GNIGLVGNISGVgnfvlrnpgkfsIYVLDSHAG-------TSNGRACPMYDAIKKDQLVWLKSrKMEFENDPI 383
                  ......222222222222222....333333333333311111122345666666666.......3333444444444444499************** PP

                  EEEEESSESS.............CSSSCSCCHHHHHHHHHHTTESEEEEESSSS CS
  Metallophos 163 vivlgHsply.............rgsgylfgdealedllkkygvdlvisGHtHv 203
                   +v++H+pl              ++++ ++ d+ +++ l + ++ l + GH+Hv
   EPX71993.1 384 QMVFFHIPLRefcevddmvgsyrEKCSSSYCDPGTAKTLSELRIPLAVAGHDHV 437
                  *****************************************************7 PP

>> Metallophos_2  Calcineurin-like phosphoesterase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.0   3.2e-09   1.9e-05       2     155 ..     208     466 ..     207     471 .. 0.66

  Alignments for each domain:
  == domain 1  score: 24.9 bits;  conditional E-value: 3.2e-09
  Metallophos_2   2 klaiiSDlH.....................snldaleavlealkevgvdaiihaGDl.eeeep.....evleellela....pvlaVrGNnD.... 62 
                    k++ +SDlH                     +     + v+e +k++++d+++++GDl ++ +      + +++l  +     p+ + +GN+D    
     EPX71993.1 208 KILQLSDLHystelakcrdsypperpsncmADATTNAFVIELIKRESPDLVLFTGDLiNGDTVedsktSLMKALAPVVdyeiPFAVAYGNHDslgd 303
                    88999****8888888888888887766443333344459****************8633333333333333344333777*************99 PP

  Metallophos_2  63 ..............................................eevveedvlreaaelgtdl...................peeaelelagek 93 
                                                                  +                                      +++++e++++ 
     EPX71993.1 304 landglaqivnqvpgniglvgnisgvgnfvlrnpgkfsiyvldshaG-----------------TsngracpmydaikkdqlvwLKSRKMEFENDP 382
                    99999999999999999999877777666666665555444443331.................03333334444444444555688888887777 PP

  Metallophos_2  94 ..vlliHgdpl....................gvkdalaellke.......aeegsd..vvvcGHtHvp...evekeggvlvvnPGsvgeprdgdpe 155
                      + ++H   l                               +       +e   +  ++v+GH Hv    ++ k+++v++  +G  g + +g ++
     EPX71993.1 383 iqMVFFHIP-LrefcevddmvgsyrekcsssY---------CDpgtaktlSEL--RipLAVAGHDHVNdfcGMHKTHQVRFCMAGGSGFGGYGGHG 466
                    556777776.4699988877775555544432.........223332221123..23599999999999888888899999999988777666655 PP

>> Ribosomal_S12  Ribosomal protein S12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   2.9   1.4e-05     0.085       3      51 ..      10      59 ..       9      73 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.4e-05
  Ribosomal_S12  3 fvrslllyGlcvrflllllvlyv.sprlpssGnrrilvaifllfnivlll 51
                   ++r +++yG+ + ++ll++ +++   +lp+s n r++++   + +i ++ 
     EPX71993.1 10 YIRLYFVYGVVLYLILLIFDYWLvKTQLPTSPNTRVAYLQTPIEDIRIVE 59
                   9****************9999861679*********98877666655544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (508 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       463  (0.0258241); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.44
# Mc/sec: 3439.80
//
Query:       EPX71994.1  [L=140]
Description: DNA-directed RNA polymerase I [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.8e-17   63.0   0.1    2.7e-17   62.4   0.1    1.3  1  RNA_pol_Rpb6  RNA polymerase Rpb6
  ------ inclusion threshold ------
      0.075   12.3   0.0      0.093   12.0   0.0    1.1  1  MipZ          ATPase MipZ


Domain annotation for each model (and alignments):
>> RNA_pol_Rpb6  RNA polymerase Rpb6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.4   0.1     3e-21   2.7e-17       2      49 .]      68     120 ..      67     120 .. 0.94

  Alignments for each domain:
  == domain 1  score: 62.4 bits;  conditional E-value: 3e-21
                   HTTSS--HHHHHHHHHHHHHHH....HT........S.S-SSSSTTCHHHHTT-S-- CS
  RNA_pol_Rpb6   2 ltskvltrYelvriaakRArQieegesl........e.tqkpvviAlrEiaegkipi 49 
                    t++++t+Ye +ri+++RA+Qi    s+        e +++p++iA++E+a++kip+
    EPX71994.1  68 TTTPYMTKYERARILGTRALQI----SMnapvlvdlEgETDPLQIAMKELAQKKIPL 120
                   589*******************....99999999997789***************96 PP

>> MipZ  ATPase MipZ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0     1e-05     0.093       9      80 ..      36     110 ..      32     126 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1e-05
                 STTSSHHHHHHHHHHHHHTTT--EEEEE--TTT-H..HHHHHHHHHHHHHHHT------EEE-SS.S-HHHHTTS CS
        MipZ   9 kGGsGksttavhvavaLlkkGarvaaidldlrqrt..larylenraataerkglsLplpealals.eaeeaevee 80 
                  G  G stt +   va +++Ga   aid + r  t  +++y   r   ++  ++s++ p  + l+ e++  ++  
  EPX71994.1  36 NGAGGESTTILSEDVASSRTGAASKAIDKEKRTTTpyMTKYERARILGTRALQISMNAPVLVDLEgETDPLQIAM 110
                 68899*************************999887789999999999999999999999888762345555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       348  (0.0194099); expected 358.6 (0.02)
Passed bias filter:                      263  (0.014669); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.45
# Mc/sec: 940.14
//
Query:       EPX71995.1  [L=398]
Description: iron ion transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      1e-37  129.8   4.2    1.8e-37  129.0   4.2    1.4  1  Cation_efflux  Cation efflux family
  ------ inclusion threshold ------
      0.013   15.6   0.1      0.035   14.2   0.1    1.7  1  ZT_dimer       Dimerisation domain of Zinc Transporter


Domain annotation for each model (and alignments):
>> Cation_efflux  Cation efflux family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.0   4.2     2e-41   1.8e-37       4     197 ..      78     295 ..      75     297 .. 0.96

  Alignments for each domain:
  == domain 1  score: 129.0 bits;  conditional E-value: 2e-41
  Cation_efflux   4 sllanlilalvelivglltnSlalladafhslsdlvsllllllalklsrkppderfpfGygrlevlgalvsgllllglavfllleaiqkli..... 94 
                    +l +n++l+++++++gl   S  llada h l d++s+l++l++lk+ rk+p++++p G+g+ e+lg++ ++ lll++ v +   ++ +l+     
     EPX71995.1  78 GLYSNIALMVAKGTGGLALQSNILLADAAHQLGDMISDLVTLFTLKICRKKPTRDYPTGFGKWETLGTFSVSGLLLAVSVGIAHSSVSRLYttffq 173
                    6889******************************************************************************************** PP

  Cation_efflux  95 ......................kegereihaglalvvalvslvvnlalllilrragrklrsaalkaaalhvlgDaltslgvlvsalvillfnlksg 168
                                           ++  ++h+ +a+++a++s+v++ +l+  +++++r ++s +l a+a+h++ Dalt l+ lv+++ +++ n +  
     EPX71995.1 174 nstsvnpadaaatdvhighshdYSELILHHPFMAMGIAFGSIVLKEWLFQRTKEVARTTSSNLLMANAWHHRADALTGLASLVALSSAYFLNAP-- 267
                    ******************9988778888999***********************************************************9555.. PP

  Cation_efflux 169 plaDpvaslligliilysalkllkeslse 197
                     ++Dp++++l++ +++ +++    +++ +
     EPX71995.1 268 -WLDPLFGCLVSTVVFRAGFTSSSKAFHQ 295
                    .8******************988888766 PP

>> ZT_dimer  Dimerisation domain of Zinc Transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.1   3.9e-06     0.035      29      74 ..     326     371 ..     304     373 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3.9e-06
                 -S----EEEEEEEE-TTS-HHHHHHHHHHHHHHHHHH-TT--EEEE CS
    ZT_dimer  29 ksGskifvdlhievdgdlsvkeaHeiadevekrikeefpgvadvli 74 
                 + G++  + + + + ++l+v+e  ++a+  e+ i +++p ++ +++
  EPX71995.1 326 TLGNTHAIHVILSMAPELTVQETSKLAKSAEEIILDAMPSLSSCIV 371
                 489************************************9988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (398 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       698  (0.0389313); expected 358.6 (0.02)
Passed bias filter:                      544  (0.0303419); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.29s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 2795.34
//
Query:       EPX71996.1  [L=1242]
Description: kinetochore protein Spc7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.3e-70  236.4  20.3    3.3e-70  236.4  20.3    1.8  2  Spc7       Spc7 kinetochore protein
    1.8e-05   24.7   0.1    4.7e-05   23.4   0.1    1.7  1  Spc7_C2    Spc7_C2
  ------ inclusion threshold ------
        2.2    8.3  11.4        6.7    6.7  11.0    2.1  1  DUF1640    Protein of unknown function (DUF1640)


Domain annotation for each model (and alignments):
>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  236.4  20.3   5.5e-74   3.3e-70       5     303 ..     765    1061 ..     762    1071 .. 0.97
   2 ?   -3.8   0.1      0.78   4.7e+03     154     182 ..    1106    1134 ..    1096    1140 .. 0.70

  Alignments for each domain:
  == domain 1  score: 236.4 bits;  conditional E-value: 5.5e-74
        Spc7    5 pisLqdFLnmtgIrFmdl.tttkrrstiaptaeekeeeekisledyvvAaactvPlLeLYqhscreLkkyisegrkiireieeetleenPpLfreYm 100 
                   +++++FL+mt I+F+d+ t+ krr+ti+ +  e+   ++++++++++++++++P+LeLY +sc++L++yi eg+++++++ e + ++nP Lf eY 
  EPX71996.1  765 ALTIDEFLSMTEIEFLDNiTSSKRRETIISGPAES---QQLTTAQLLESYYLQFPILELYRFSCQKLEEYIIEGKDFVTKMAEVAHKNNPLLFYEYR 858 
                  5789*************967779999999998666...9********************************************************** PP

        Spc7  101 eadpdvkalmdnqfklvKtnarlqakkdWYeWRmqllegLkegleenlegleedkelLekqeeeldellpeleeekaeleeeleklqeaaeelesid 197 
                  +a++++kalm++qf+ +Kt++rlqa++ WYeWR  l++g+k++l+enl++l++   ++++ +++l  + +el++++++++ ++e l++++e + ++ 
  EPX71996.1  859 KASSEMKALMNSQFRIIKTFSRLQAQGYWYEWREALMQGIKQELDENLMKLKKNLIQISETRSKLLPFFKELRTNFSTVSTKVEALRKRKELFGQYS 955 
                  ************************************************************************************************* PP

        Spc7  198 keeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeaervleeckgwsesevsrlkeevkaleeltgwkivslsgstl 294 
                  ke + ++++++++l++e++ k+k l e+q+ + +le++i++l+++++ le + +e++++++++++++ +e+ ++++e+++l++++gw+ivs++++++
  EPX71996.1  956 KELVLQTQSKFEDLQKELNLKRKTLIERQAYKRNLEKEIDDLTKRCKGLEMRCQEEREFYNANQDFEYDEITEYQQELSQLQRKLGWTIVSIRPNEM 1052
                  ************************************************************************************************* PP

        Spc7  295 eltyrsele 303 
                  +l+ +++l+
  EPX71996.1 1053 KLIWNHSLQ 1061
                  ***999883 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 0.78
        Spc7  154 dkelLekqeeeldellpeleeekaeleee 182 
                   ++ ++k+ ++l+ +++e+ ++ ++l+e 
  EPX71996.1 1106 KSKIIKKNVKLLKPVMDEIAAYWNQLQEL 1134
                  45667777777777777777777777765 PP

>> Spc7_C2  Spc7_C2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.1   7.9e-09   4.7e-05       4      61 ..    1122    1179 ..    1120    1180 .. 0.95

  Alignments for each domain:
  == domain 1  score: 23.4 bits;  conditional E-value: 7.9e-09
     Spc7_C2    4 ssvsagWdkalqvaedirrLnlkfPttvaktsdssiavtsslLlpklktKVevtfsld 61  
                   +++a+W++++ ++ ++ rL+l +P  ++  +   + ++++++l +  tK  + f ++
  EPX71996.1 1122 DEIAAYWNQLQELLLEFERLKLYWPYVSFNWEKQCLVIRVEIYLQSRATKLLIEFNIP 1179
                  6799*************************************************99875 PP

>> DUF1640  Protein of unknown function (DUF1640)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7  11.0    0.0011       6.7       6     106 ..     877    1001 ..     872    1052 .. 0.71

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0011
     DUF1640    6 lvrrLeekGftkeqAeaimsaltevlneslekvakslvskseleksey....lqkaalselrkevqise.................rsefaalrset 81  
                   ++rL+++G+  e  ea+m+ +++ l e+l k++k+l++ se  + ++    + + ++s + ++v+ ++                 +s+f+ l++e 
  EPX71996.1  877 TFSRLQAQGYWYEWREALMQGIKQELDENLMKLKKNLIQISETRSKLLpffkELRTNFSTVSTKVEALRkrkelfgqyskelvlqtQSKFEDLQKEL 973 
                  5789***********************************9999888872222457888889998888887766666666666666655555555553 PP

     DUF1640   82 e...klqreleklkqkLreeidklkadi 106 
                  +   k  +e ++ k +L++eid+l++  
  EPX71996.1  974 NlkrKTLIERQAYKRNLEKEIDDLTKRC 1001
                  3111333444555555555555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1242 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1360  (0.0758548); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.85u 0.29s 00:00:01.13 Elapsed: 00:00:00.46
# Mc/sec: 8090.39
//
Query:       EPX71997.1  [L=1042]
Description: P-type proton ATPase Pma2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      2e-46  157.8   5.0    5.4e-45  153.1   2.3    3.1  3  E1-E2_ATPase     E1-E2 ATPase
    3.3e-16   60.2   0.0    8.1e-16   58.9   0.0    1.7  1  Hydrolase        haloacid dehalogenase-like hydrolase
    3.9e-12   45.7   0.1    9.5e-12   44.4   0.1    1.6  1  Cation_ATPase_N  Cation transporter/ATPase, N-terminus
    0.00024   21.1   0.0    0.00049   20.1   0.0    1.4  1  Cation_ATPase    Cation transport ATPase (P-type)
     0.0029   17.4   0.1     0.0074   16.1   0.1    1.7  1  Hydrolase_3      haloacid dehalogenase-like hydrolase
  ------ inclusion threshold ------
      0.016   15.1   0.0      0.036   14.0   0.0    1.6  1  Stealth_CR3      Stealth protein CR3, conserved region 3
       0.39   10.6  25.4        0.7    9.8  25.4    1.3  1  TFIIA            Transcription factor IIA, alpha/beta subunit


Domain annotation for each model (and alignments):
>> E1-E2_ATPase  E1-E2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.1   2.3   2.1e-48   5.4e-45       5     181 .]     296     474 ..     292     474 .. 0.97
   2 ?    3.5   0.0     0.017        44      53      80 ..     673     700 ..     662     704 .. 0.89
   3 ?   -2.8   0.0       1.5   3.8e+03     114     139 ..     869     894 ..     858     908 .. 0.74

  Alignments for each domain:
  == domain 1  score: 153.1 bits;  conditional E-value: 2.1e-48
                   -EEEEE-TTS-EEEEGGG--TTSEEEEETT-B--SEEEEEEE-S..EEE-TTTS---S-EE-G-TTEE-TT-EEEE-EEEEEEEE-TTTSTTTTTST CS
  E1-E2_ATPase   5 ptakvirdgteeeidakelvpGDivllkagdrvpaDgrivegsa..evdesaLTGEslpvekekgdmvfsGtvvvsgeakavVtatgedtelgkiar 99 
                    +++virdg  +e++ak++vpGDi+ l  g + paDgr++++ +  +vd+sa+TGEsl+v+k++gd+++s+++v++gea ++Vtat+ +t++g++a+
    EPX71997.1 296 LKSTVIRDGHAVEVEAKDIVPGDILHLDDGTICPADGRLISEDCylQVDQSAITGESLAVDKHNGDTMYSSSSVKRGEAYMIVTATADSTFVGRAAS 392
                   5789********************************************************************************************* PP

                   TS--------HHHHHHHHHHHHHHHHHHHHHHHHHHS-STTTSSTTHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHT CS
  E1-E2_ATPase 100 lveeakskktplqkkldklgkvlvpvvlliallvflialllgkslaeallralallvaaiPcaLplavplalalgarrlakk 181
                   lv +a +++ ++++ l+ +g vl ++v+l +l ++ +a++++  la+ l  +la+ ++ +P +Lp++v++++a+ga+ lakk
    EPX71997.1 393 LVGAAGQAQGHFTEVLNGIGTVLLVLVILTLLCIYTAAFYRTVRLARLLEYTLAITIIGVPVGLPAVVTTTMAVGAAYLAKK 474
                   ********************************************9999999*****************************97 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.017
                   TTTS---S-EE-G-TTEE-TT-EEEE-E CS
  E1-E2_ATPase  53 saLTGEslpvekekgdmvfsGtvvvsge 80 
                    +LTG+++ + ke+  ++ +Gt+v + e
    EPX71997.1 673 KMLTGDAVGIAKETARQLGMGTNVYNAE 700
                   79*********************98865 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 1.5
                   HHHHHHHHHHHHHHHHHHHHHHS-ST CS
  E1-E2_ATPase 114 kldklgkvlvpvvlliallvfliall 139
                   +l +l +  ++v++l+a+ +++++ +
    EPX71997.1 869 NLPRLWGLSTVVGILLAIGTWIVNTT 894
                   56667777788888888888888754 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.9   0.0   3.2e-19   8.1e-16       3     210 .]     492     764 ..     490     764 .. 0.73

  Alignments for each domain:
  == domain 1  score: 58.9 bits;  conditional E-value: 3.2e-19
                 EEEEESBTTTBCHH.....HHHHHHHHHH........CHHHHHHHHHH........HHCHHHHHHHHHHHHH.................HHHHHHHHHE CS
                 xxxxxxxxxxxxxx.....xxxxxxxxxx........xxxxxxxxxxx........xxxxxxxxxxxxxxxx.................xxxxxxxxxx RF
   Hydrolase   3 tvvfDkdGTLttge.....psvedvivsa........alalaaaletg........sehpigkalvaaakar.................sgaltgfatf 63 
                  ++ Dk+GTLt+ +     p +++ ++          a         +         ++ + kal  + +a                  s ++t + + 
  EPX71997.1 492 ILCSDKTGTLTKNRlsmgePYCVEGVDPDelmitsclA--------SSrkkkgldaIDKAFLKALRDYPNAKqklskykilqfhpfdpvSKKVTAIVET 582
                 6899*******666554447777777766344433331........33333333333333333333333333444433333666666666666666665 PP

                 TTTE..HHHHTHHHHHHHH.HCHHHHHHHHHHHHHHCHHHHHH...............TTHHHHHHHHHHTHHBHTTHHHHHHHHHHTTEEEEEEESSE CS
                 xxxx..xxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxx...............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  64 igrg..ayaigkpewltal.dippdlgaaigsaqsqgrtvall...............qaralavftiadplkvkpeaaeavasLkaagievvlltgdn 144
                 ++    +  +g p w+ +     +++ ++i++a ++   ++                 q ++l++   +dp  ++ ++  ++ +  + g+++ +ltgd 
  EPX71997.1 583 PEGErvTCVKGAPLWVFKTvQEDHEVSQEISDAYREQVNEMASrgfrslgvarkiegkQWDILGIMPCSDP--PRNDTGRTISEAIRLGLRIKMLTGDA 679
                 555599999**********97777778888888777777777788888888*99999999***********..************************** PP

                 HHHHHHHHHHTT...............GGGESEEEEHHCES................STTTSHHHHHHHHHHHTSTGGGEEEEESSHHHHHHHHHTT CS
                 xxxxxxxxxxxx...............xxxxxxxxxxxxxx................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 145 petaeraanqlG...............ddyfdaviasdiet................vakpspegkvaaireLqgkpeevamVGDgvnDaaalaaAg 210
                    a+++a+qlG                            +                +a++ p++k  +++ Lq ++  vam GDgvnDa+ l++A+
  EPX71997.1 680 VGIAKETARQLGmgtnvynaerlglggG------------GdmpgsevydfveaadgFAEVFPQHKYSVVDILQQRGYLVAMTGDGVNDAPSLKKAD 764
                 ************8876666666555552............13334444444445899*****************99999****************98 PP

>> Cation_ATPase_N  Cation transporter/ATPase, N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.4   0.1   3.7e-15   9.5e-12      12      68 ..     197     252 ..     188     253 .. 0.88

  Alignments for each domain:
  == domain 1  score: 44.4 bits;  conditional E-value: 3.7e-15
  Cation_ATPase_N  12 kLetdlenGLtqaeaaerlkkyGpNelkekkkkslwvkllkqftnplvilLlvaalv 68 
                       L+td+++GL+q+e+++r++kyG N++ +++k++ ++k+l+ f  p+  +++ aa++
       EPX71997.1 197 LLQTDPKQGLSQSEVEQRQSKYGLNQM-KEEKQNNFKKFLSFFIGPIQFVMELAAAL 252
                      358************************.77777889*******************98 PP

>> Cation_ATPase  Cation transport ATPase (P-type)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   1.9e-07   0.00049      22      87 ..     538     601 ..     528     604 .. 0.91

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 1.9e-07
  Cation_ATPase  22 nktEsALlvlaeklgldteelreetkkvqeipFnssrKrmsvvlklepekkvrlyvKGApeiilkr 87 
                    ++ + A l++ ++   + ++  +++k++q  pF+ + K  + ++++ pe++ +  vKGAp  ++k 
     EPX71997.1 538 DAIDKAFLKALRDY-PNAKQKLSKYKILQFHPFDPVSKKVTAIVET-PEGERVTCVKGAPLWVFKT 601
                    6779999******9.999999*****************99999998.8************999885 PP

>> Hydrolase_3  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.1   2.9e-06    0.0074     206     243 ..     747     784 ..     736     796 .. 0.89

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 2.9e-06
                  EEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEE CS
  Hydrolase_3 206 viafGDgeNDieMLeaaglgvAmgnaseevkkaAdyvt 243
                  v+  GDg ND + L++a++g+A++ as+ + +aAd v 
   EPX71997.1 747 VAMTGDGVNDAPSLKKADTGIAVEGASDAARSAADIVF 784
                  5677*******************************997 PP

>> Stealth_CR3  Stealth protein CR3, conserved region 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   1.4e-05     0.036      10      33 ..     607     630 ..     605     632 .. 0.92

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1.4e-05
  Stealth_CR3  10 svlkelerrfpeelartashrFRs 33 
                  +v +e+++++ e+++++as+ FRs
   EPX71997.1 607 EVSQEISDAYREQVNEMASRGFRS 630
                  5779*******************8 PP

>> TFIIA  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8  25.4   0.00027       0.7     146     332 ..      40     216 ..       3     247 .. 0.39

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00027
       TFIIA 146 v..........qasgaqqiaaqplqqvvqqsqgsaaqssvaalqaq.sqqaqalaepqqqlekqqqqqqqqqqqqqqqqvqqqqqeesqqaqqasqeqv 233
                 +          +++ +++ia++ ++  + + qg+  +s+v   +a+   + +a+ +p q  +    q  qq+qqq q ++qqq+q +s+ +++a++e+ 
  EPX71997.1  40 TyvyddsdphaAQQDTASIASSGQERYTDSDQGNHDSSAVDYDNASgAVAPNAQNQPPQSPA---GQTAQQPQQQRQPTQQQQHQPPSSPPDSANNEKA 135
                 12233443443444444444444444433366666555555555555555555555555522...1223344444444555555433333333333322 PP

       TFIIA 234 ag..sqvessqtdgae...daleeespvlegelsaeeeagaqkeelsreeidrire.................ealkakelekeskkkkraeessladl 310
                 a+  +q++ +q        d++e+e + +++ +++  ++++q+ee ++ee +   e                 +                         
  EPX71997.1 136 AEaaNQTQGQQGP--GgdgDDDEDEDEDIDALIEDLYSQDNQEEEEEEEENH---EpggvkavpqellqtdpkQ------------------------- 204
                 2201222222222..2323222222222222222222222222222222111...1112222333444444431......................... PP

       TFIIA 311 seilqlDGagddsdeeeeeees 332
                             s++e e+ +s
  EPX71997.1 205 ----------GLSQSEVEQRQS 216
                 ..........333332222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1042 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1768  (0.0986112); expected 358.6 (0.02)
Passed bias filter:                      837  (0.0466841); expected 358.6 (0.02)
Passed Vit filter:                       111  (0.00619109); expected 17.9 (0.001)
Passed Fwd filter:                        24  (0.00133861); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 1.12u 0.33s 00:00:01.45 Elapsed: 00:00:00.48
# Mc/sec: 6553.22
//
Query:       EPX71998.1  [L=394]
Description: non-specific DNA binding protein Spt2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.1e-23   82.4  16.9    3.1e-23   82.4  16.9    3.4  3  SPT2      SPT2 chromatin protein


Domain annotation for each model (and alignments):
>> SPT2  SPT2 chromatin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?  -20.6  25.5         1   1.8e+04      61      93 ..      52      84 ..      15     109 .. 0.54
   2 ?   -2.9   0.4      0.55   9.9e+03      11      23 ..     132     144 ..     116     169 .. 0.49
   3 !   82.4  16.9   1.7e-27   3.1e-23      10     110 ..     293     390 ..     282     391 .. 0.87

  Alignments for each domain:
  == domain 1  score: -20.6 bits;  conditional E-value: 1
        SPT2 61 aesddddrdMEangaeieeEErrSariArkEDe 93
                 e++   +  E + +++++E +r++  A++ ++
  EPX71998.1 52 RERELRMKYEEEQKRRQLKEQKRASENAKHSER 84
                222223334444555555555555555555554 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.55
        SPT2  11 rrseeeeedsdld 23 
                 ++++++++ s+l+
  EPX71998.1 132 NSKSNSPSTSKLS 144
                 2222222222222 PP

  == domain 3  score: 82.4 bits;  conditional E-value: 1.7e-27
        SPT2  10 krrseeeeedsdlddfieddeeeeeerrryarseIwaifnkdkkkyesrddaesddddrdMEangaeieeEErrSariArkEDeeEeerekreeeekkk 108
                 +r s++++++   ddf+++deee++   ++++seIw+if+k+k++y srd   sddd  dMEa+g+++++EE+ +ar Ar+EDe Ee+re+++e +k++
  EPX71998.1 293 PRVSQPKSKNAPRDDFLVSDEEEDD-GIQDVSSEIWKIFGKRKQDYVSRDALYSDDD--DMEATGQDVWREEQAAARAARREDELEEQREREREMAKRR 388
                 4556677778889*****9999776.5679**************8888888888887..9*************************************** PP

        SPT2 109 rk 110
                 +k
  EPX71998.1 389 KK 390
                 *9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (394 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2305  (0.128563); expected 358.6 (0.02)
Passed bias filter:                      468  (0.026103); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.85u 0.32s 00:00:01.17 Elapsed: 00:00:00.47
# Mc/sec: 2502.76
//
Query:       EPX71999.1  [L=151]
Description: 40S ribosomal protein S15 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.4e-31  107.0   0.0    4.7e-31  106.5   0.0    1.2  1  Ribosomal_S19  Ribosomal protein S19


Domain annotation for each model (and alignments):
>> Ribosomal_S19  Ribosomal protein S19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.5   0.0   2.6e-35   4.7e-31       9      81 .]      58     134 ..      49     134 .. 0.90

  Alignments for each domain:
  == domain 1  score: 106.5 bits;  conditional E-value: 2.6e-35
                    CCCHHHHHHHHHHTS-....----EEES-TT-B--GGGTT-EEEEE-SSSEEEEE--CCCTTSBCGGGT-SS----S CS
  Ribosomal_S19   9 vqesllkkvrkakaek....kkevikthsRdstIlPemvgltvgVynGktfvpveikeemvGhkLgEFspTrkpvkh 81 
                     + +++kk+r+akae     k+ v+kth+R++++lPemvg+ vg+ynGk f++vei++em+Gh+LgEFs+++kp++h
     EPX71999.1  58 GASRFIKKLRQAKAEAplneKPAVVKTHLRSMIVLPEMVGSLVGIYNGKLFNQVEIRPEMIGHYLGEFSISYKPTRH 134
                    567899****9995555788******************************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       391  (0.0218082); expected 358.6 (0.02)
Passed bias filter:                      349  (0.0194657); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.28s 00:00:00.71 Elapsed: 00:00:00.45
# Mc/sec: 1010.17
//
Query:       EPX72000.1  [L=229]
Description: Sim4 and Mal2 associated protein 4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-26   93.2  12.1    2.4e-26   92.9  12.1    1.1  1  FTA4      Kinetochore complex Fta4 of Sim4 subunit, or CENP-5


Domain annotation for each model (and alignments):
>> FTA4  Kinetochore complex Fta4 of Sim4 subunit, or CENP-50
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.9  12.1   1.4e-30   2.4e-26       2     197 ..       3     195 ..       2     199 .. 0.87

  Alignments for each domain:
  == domain 1  score: 92.9 bits;  conditional E-value: 1.4e-30
        FTA4   2 ilelKqsfldtqvriLsqPLapsrewrsaneeeeendeelsekavddvLaklNhrlkqhnrrvyspqairhvaeQidklYleaedekleie.......v 93 
                 i++ K+sfl++q+++Ls+PL++ ++++ + e+++      + ++v++v+++l+ r+k+h r  ys+qa++hva Qi klY ++ ++ ++++        
  EPX72000.1   3 IYDKKKSFLTRQIQLLSHPLQIPKKLHIQSESND-----FNHSVVERVFQRLHLRVKRHVRFNYSQQATQHVAAQIRKLYEQT-TQLENLSslpsylyG 95 
                 5678999********************9998888.....899*************************************9996.333344223456779 PP

        FTA4  94 nedltkeelIkeLPesweveekeaeeepleallerYaelrarLielserrqqlqarlarlrklkallepflgsedpqesvqenlvtrdgeleaElermR 192
                 + dl + ++ + LP++w+  + e++e++++++++ Y+ l  +L +  ++++q ++  +  ++ +  l+pf    ++++  +++++  + el + l+ ++
  EPX72000.1  96 DFDLHDIKSLQDLPHPWP-FQLEQSEQEKQSQQDYYDSLLGELMSSLSSLEQIKQERKVTEEYRLSLKPF---LTNTQLPTRQQWKTNTELPTLLSSIN 190
                 99****************.66777777888889*************************************...66777777888888888877777777 PP

        FTA4 193 vLlar 197
                 v +ar
  EPX72000.1 191 VKIAR 195
                 76666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1218  (0.0679346); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 1540.79
//
Query:       EPX72001.1  [L=791]
Description: RNA-silencing factor Ers1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (791 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       702  (0.0391544); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.66u 0.26s 00:00:00.92 Elapsed: 00:00:00.45
# Mc/sec: 5309.86
//
Query:       EPX72002.1  [L=408]
Description: rRNA processing protein Ipi1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-24   86.1   2.1    5.7e-24   84.7   0.9    2.5  4  Ipi1_N    Rix1 complex component involved in 60S ribosome mat


Domain annotation for each model (and alignments):
>> Ipi1_N  Rix1 complex component involved in 60S ribosome maturation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0      0.65   1.2e+04      56      71 ..      67      82 ..      62     108 .. 0.56
   2 !   84.7   0.9   3.2e-28   5.7e-24       2     102 .]     138     234 ..     137     234 .. 0.88
   3 ?   -2.9   0.0      0.58     1e+04       3      20 ..     301     318 ..     299     326 .. 0.77
   4 ?   -2.1   0.0      0.33   5.9e+03      25      45 ..     335     355 ..     331     398 .. 0.54

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 0.65
      Ipi1_N 56 flallgwskeksskgs 71
                ++++l ++++++ ++s
  EPX72002.1 67 LVGMLKHHNASQRQES 82
                5666666442222222 PP

  == domain 2  score: 84.7 bits;  conditional E-value: 3.2e-28
      Ipi1_N   2 elaphaeslllyirsAmTHispdIredslkfLdllLevapee....lvssawvktLnnflallgwskeksskgstsakatsssssskktskksrlkvLs 96 
                  l+p + +++ly++s+mTHi+p+Ir+ds+++L+++L+++ ++    ++ss+w ktL++f +llgws    +++ +   ++ +s+ skk s  + ++++s
  EPX72002.1 138 LLEPNVGIMFLYTHSGMTHITPSIRNDSTRYLSIILKACRNKlsssIISSHWKKTLECFSSLLGWS----TDSAS---VKRTSVFSKK-STSNLIRHIS 228
                 68999**********************************999777788888**************4....33322...3457889999.99******** PP

      Ipi1_N  97 vlakfL 102
                 v+++fL
  EPX72002.1 229 VCNEFL 234
                 *****8 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 0.58
      Ipi1_N   3 laphaeslllyirsAmTH 20 
                 + p+++ l+ ++r A T 
  EPX72002.1 301 MLPFIPGLIDFVRDAWTD 318
                 679999999999999886 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 0.33
      Ipi1_N  25 IredslkfLdllLevapeelv 45 
                 I ++ +++Ld+l +++  ++ 
  EPX72002.1 335 ICQSVISILDVLADYILASSF 355
                 555555666666665544422 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (408 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       860  (0.047967); expected 358.6 (0.02)
Passed bias filter:                      519  (0.0289475); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 2878.51
//
Query:       EPX72003.1  [L=857]
Description: hypothetical protein SOCG_03937 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.055   13.6   0.3      0.091   12.9   0.3    1.3  1  UPF0242     Uncharacterised protein family (UPF0242) N-termin
       0.26   10.9   1.7         15    5.2   0.2    3.0  2  zf_C2H2_10  C2H2 type zinc-finger


Domain annotation for each model (and alignments):
>> UPF0242  Uncharacterised protein family (UPF0242) N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.3     1e-05     0.091      20     115 ..     713     812 ..     709     842 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1e-05
     UPF0242  20 aiysiqllseqksWsll.siGl...llaaaGsLlllllllkwekalkekl.ekskleekeaklteldeglktkeealeelqeeeeeLkeeldakeeele 113
                   y++ +++    W+ + s      l++++  + llll++++   l+  + ++s+l +   k  e+ ++lk  + +l ++q+ +++L+e++   ++e++
  EPX72003.1 713 NNYENVVIPAPSTWQNFcSYSQfllLILSCLGI-LLLLVYQMTLPLEPAIdQASFLTTPLPKNFEKHDDLKSLQIKLLQVQAVNQKLQEQYRTVTKEVH 810
                 556677777777787442344421144444333.45666666667776669***************************************999999998 PP

     UPF0242 114 rl 115
                 + 
  EPX72003.1 811 KT 812
                 75 PP

>> zf_C2H2_10  C2H2 type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.2    0.0017        15      11      21 ..      19      29 ..      17      31 .. 0.89
   2 ?    3.4   0.1    0.0061        55       6      21 ..     772     787 ..     771     790 .. 0.91

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.0017
  zf_C2H2_10 11 klPDiDtLQIH 21
                + PD  +LQIH
  EPX72003.1 19 QHPDFYSLQIH 29
                67********* PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.0061
  zf_C2H2_10   6 PKCqeklPDiDtLQIH 21 
                 PK +ek  D+ +LQI 
  EPX72003.1 772 PKNFEKHDDLKSLQIK 787
                 999************5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (857 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       895  (0.0499191); expected 358.6 (0.02)
Passed bias filter:                      622  (0.0346924); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.76u 0.31s 00:00:01.07 Elapsed: 00:00:00.48
# Mc/sec: 5318.07
//
Query:       EPX72004.1  [L=520]
Description: transcription factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.7e-28   97.3  16.1    4.7e-14   51.7   3.2    2.7  2  GATA             GATA zinc finger
    3.9e-05   23.7   3.7     0.0091   16.1   0.5    2.3  2  ArfGap           Putative GTPase activating protein for Arf
      0.003   17.0   2.9       0.87    9.2   0.3    2.5  2  TF_Zn_Ribbon     TFIIB zinc-binding
     0.0032   17.3   5.5      0.035   14.0   1.2    2.3  2  eIF-5_eIF-2B     Domain found in IF2B/IF5
  ------ inclusion threshold ------
      0.037   14.1   0.5      0.037   14.1   0.5    2.1  2  Elf1             Transcription elongation factor Elf1 like
      0.041   14.0   2.0        9.7    6.4   0.3    2.7  2  Zn-ribbon_8      Zinc ribbon domain
      0.062   13.0   0.1      0.062   13.0   0.1    2.4  3  zf-RRN7          Zinc-finger of RNA-polymerase I-specific TFI
       0.58   10.2   9.2        2.5    8.2   1.3    2.7  3  DZR              Double zinc ribbon
        1.1    8.7   5.9         21    4.5   5.7    2.1  2  NMD3             NMD3 family
        2.1    8.7   4.6        6.6    7.1   0.5    2.4  2  DUF3268          zinc-finger-containing domain
        2.8    7.8   8.7        6.3    6.6   0.7    3.2  3  zinc_ribbon_10   Predicted integral membrane zinc-ribbon meta
        5.7    7.2   5.7         25    5.1   0.5    2.5  2  Auto_anti-p27    Sjogren's syndrome/scleroderma autoantigen 1
        6.1    7.4  10.6         17    6.0   1.6    2.9  2  Zn_ribbon_recom  Recombinase zinc beta ribbon domain
         10    6.4  10.1        9.2    6.5   0.4    3.4  2  zf-piccolo       Piccolo Zn-finger


Domain annotation for each model (and alignments):
>> GATA  GATA zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.7   3.2   3.6e-17   4.7e-14       1      36 []     350     385 ..     350     385 .. 0.97
   2 !   50.6   5.1   8.1e-17     1e-13       1      35 [.     404     437 ..     404     438 .. 0.98

  Alignments for each domain:
  == domain 1  score: 51.7 bits;  conditional E-value: 3.6e-17
        GATA   1 CsnCgttkTplWRrgpdgnksLCnaCGlyykkkglk 36 
                 C nCg+t+TplWRr  d++  LCnaCGly k++g++
  EPX72004.1 350 CFNCGATQTPLWRRTADKHHYLCNACGLYTKQYGVM 385
                 *********************************986 PP

  == domain 2  score: 50.6 bits;  conditional E-value: 8.1e-17
        GATA   1 CsnCgttkTplWRrgpdgnksLCnaCGlyykkkgl 35 
                 C+nC++tkT+lWR+++ g++ +CnaCGly +++g+
  EPX72004.1 404 CANCNATKTSLWRKNRVGQT-VCNACGLYARLHGH 437
                 ********************.************97 PP

>> ArfGap  Putative GTPase activating protein for Arf
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.2    0.0019       2.5      11      47 ..     345     383 ..     334     387 .. 0.76
   2 !   16.1   0.5   7.1e-06    0.0091       8      47 ..     396     436 ..     390     440 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0019
                 CCCCB-TTT.-SBS--EEET.TTTEEE-HHHHHHHCCS. CS
      ArfGap  11 penkvCaDC.gakeptWasl.nlgvflCieCsgvHrslg 47 
                   ++vC++C  ++ p W  +   + +lC  C    ++ g
  EPX72004.1 345 VREHVCFNCgATQTPLWRRTaDKHHYLCNACGLYTKQYG 383
                 4678*****5556799*98868899******87777666 PP

  == domain 2  score: 16.1 bits;  conditional E-value: 7.1e-06
                 CCSCCCCB-TTT.-SBS--EEETTTTEEE-HHHHHHHCCS. CS
      ArfGap   8 lkepenkvCaDC.gakeptWaslnlgvflCieCsgvHrslg 47 
                 +k pen +Ca+C  +k + W    +g ++C  C    r +g
  EPX72004.1 396 QKGPENLICANCnATKTSLWRKNRVGQTVCNACGLYARLHG 436
                 6789********5456678**************87766555 PP

>> TF_Zn_Ribbon  TFIIB zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.1    0.0018       2.3       2      27 ..     349     377 ..     348     385 .. 0.84
   2 !    9.2   0.3   0.00068      0.87       2      27 ..     403     430 ..     402     431 .. 0.80

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0018
                   EETTTTCEEC...HEETSTTCEEESSSSB CS
  TF_Zn_Ribbon   2 kCPnCgstnl...veDpergelvCtdCGl 27 
                   +C nCg t++    + ++   ++C +CGl
    EPX72004.1 349 VCFNCGATQTplwRRTADKHHYLCNACGL 377
                   899****997766666889999******8 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00068
                   EETTTTCEE.CHEE.TSTTCEEESSSSB CS
  TF_Zn_Ribbon   2 kCPnCgstn.lveD.pergelvCtdCGl 27 
                   +C nC+ t+  ++  +  g +vC +CGl
    EPX72004.1 403 ICANCNATKtSLWRkNRVGQTVCNACGL 430
                   799****77446664778*********7 PP

>> eIF-5_eIF-2B  Domain found in IF2B/IF5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.2     0.014        19      89     115 ..     349     376 ..     332     378 .. 0.84
   2 !   14.0   1.2   2.7e-05     0.035      88     115 ..     402     429 ..     400     431 .. 0.95

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.014
                   STSSSTSTCEEECC.SSSCEEEEESSST CS
  eIF-5_eIF-2B  89 lCkeCkspetelek.eerllvlkCkaCg 115
                   +C +C+  +t l + + + +   C+aCg
    EPX72004.1 349 VCFNCGATQTPLWRrTADKHHYLCNACG 376
                   49**********99744445589****9 PP

  == domain 2  score: 14.0 bits;  conditional E-value: 2.7e-05
                   TSTSSSTSTCEEECCSSSCEEEEESSST CS
  eIF-5_eIF-2B  88 VlCkeCkspetelekeerllvlkCkaCg 115
                   ++C +C+   t+l +++r+  + C+aCg
    EPX72004.1 402 LICANCNATKTSLWRKNRVGQTVCNACG 429
                   58*************************9 PP

>> Elf1  Transcription elongation factor Elf1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.4       1.1   1.4e+03      20      54 ..     346     378 ..     333     384 .. 0.59
   2 ?   14.1   0.5   2.9e-05     0.037       7      57 ..     387     434 ..     379     439 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 1.1
        Elf1  20 tkFdCpfCnheksvevkldkkekiaevsCkvCges 54 
                 ++  C +C+++++      ++ ++ +  C+ Cg++
  EPX72004.1 346 REHVCFNCGATQT--PLWRRTADKHHYLCNACGLY 378
                 4556777777644..22334444556667777765 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 2.9e-05
        Elf1   7 akkrkkkkkkklptkFdCpfCnheksvevkldkkekiaevsCkvCgesfet 57 
                 + ++k+k+++k p++  C +Cn++   + +l +k+++++  C+ Cg+++++
  EPX72004.1 387 PLTPKNKSSQKGPENLICANCNAT---KTSLWRKNRVGQTVCNACGLYARL 434
                 56678999999*************...889****************98765 PP

>> Zn-ribbon_8  Zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.3    0.0076       9.7       7      34 ..     349     377 ..     347     382 .. 0.76
   2 ?    6.4   0.1    0.0078        10       8      33 ..     404     429 ..     400     434 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0076
  Zn-ribbon_8   7 rCeeCghefevlqsisdaplta.CPeCgs 34 
                   C +Cg + ++l + + ++    C +Cg 
   EPX72004.1 349 VCFNCGATQTPLWRRTADKHHYlCNACGL 377
                  699***99998777774555556****95 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0078
  Zn-ribbon_8   8 CeeCghefevlqsisdapltaCPeCg 33 
                  C +C+ + + l + ++  +t+C +Cg
   EPX72004.1 404 CANCNATKTSLWRKNRVGQTVCNACG 429
                  ******999877777777999****9 PP

>> zf-RRN7  Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.4       2.5   3.2e+03      23      28 ..     349     354 ..     347     358 .. 0.74
   2 ?   -2.6   0.1       3.6   4.6e+03       7      11 ..     372     376 ..     371     379 .. 0.68
   3 ?   13.0   0.1   4.9e-05     0.062       4      28 ..     401     429 ..     399     430 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 2.5
     zf-RRN7  23 yCrrCh 28 
                 +C +C+
  EPX72004.1 349 VCFNCG 354
                 688887 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 3.6
     zf-RRN7   7 CgvCg 11 
                 C +Cg
  EPX72004.1 372 CNACG 376
                 77777 PP

  == domain 3  score: 13.0 bits;  conditional E-value: 4.9e-05
     zf-RRN7   4 gppCgvCgc...rsftl.ddGfyyCrrCh 28 
                 + +C+ C++    +++    G+++C+ C+
  EPX72004.1 401 NLICANCNAtktSLWRKnRVGQTVCNACG 429
                 679********55***************9 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   1.3    0.0019       2.5      11      35 ..     346     376 ..     340     383 .. 0.73
   2 ?    4.3   9.9     0.032        41       1      49 []     350     429 ..     350     429 .. 0.84
   3 ?    3.0   2.2     0.081     1e+02       1      19 [.     404     429 ..     404     439 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0019
         DZR  11 darfCseCgtklkavaa......edrCpsCg 35 
                 + ++C++Cg++  +  +      ++ C +Cg
  EPX72004.1 346 REHVCFNCGATQTPLWRrtadkhHYLCNACG 376
                 5678999998855444455588899999997 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.032
         DZR   1 CpqCgee........lppdarfCseCgtklkavaa................edrCpsCgekvdpearf.......CpeCG 49 
                 C +Cg+          +++   C++Cg   k++                  +  C +C++  ++ +r        C++CG
  EPX72004.1 350 CFNCGATqtplwrrtADKHHYLCNACGLYTKQYGVmrpltpknkssqkgpeNLICANCNATKTSLWRKnrvgqtvCNACG 429
                 999999999999988888889********997777999999*********9999****9986655555566777799998 PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.081
         DZR   1 CpqCgee.......lppdarfCseCg 19 
                 C++C++        ++ ++ +C++Cg
  EPX72004.1 404 CANCNATktslwrkNRVGQTVCNACG 429
                 77777766676666888888888887 PP

>> NMD3  NMD3 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.5     0.019        25      13      46 ..     347     380 ..     335     397 .. 0.73
   2 ?    4.5   5.7     0.016        21       1      53 [.     350     418 ..     350     452 .. 0.55

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.019
        NMD3  13 nglCedCllkevditegiekievevCkeCgrylp 46 
                 + +C +C ++++++ +     +  +C+ Cg y +
  EPX72004.1 347 EHVCFNCGATQTPLWRRTADKHHYLCNACGLYTK 380
                 3477777777777777777777777777777764 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.016
        NMD3   1 CcrCGkei....eeling.......lCedC..llkevdite.......giek.ievevCkeCgrylpkgkWvka 53 
                 C +CG++     +    +       lC++C  ++k++ +++         +k  e  +C++C++ + +  W k+
  EPX72004.1 350 CFNCGATQtplwR----RtadkhhyLCNACglYTKQYGVMRpltpknkSSQKgPENLICANCNATKTS-LWRKN 418
                 6667766644441....223334456666655555555555555444433444456666666666655.55332 PP

>> DUF3268  zinc-finger-containing domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.3      0.11   1.4e+02      20      41 ..     360     380 ..     346     390 .. 0.77
   2 ?    7.1   0.5    0.0051       6.6      20      62 ..     414     453 ..     400     459 .. 0.77

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.11
     DUF3268  20 iYkerskgkllylCpkCdayvg 41 
                 ++  r+ +k  ylC+ C+ y +
  EPX72004.1 360 LW-RRTADKHHYLCNACGLYTK 380
                 56.67888999*******9975 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0051
     DUF3268  20 iYkerskgkllylCpkCdayvgvhkgtkiplGtlAnaelrklr 62 
                 ++++++ g    +C+ C+ y ++h + + plG   n+ +r+ r
  EPX72004.1 414 LWRKNRVG--QTVCNACGLYARLHGH-DRPLGLKKNKLIRRRR 453
                 55445555..348**********966.56***99999999887 PP

>> zinc_ribbon_10  Predicted integral membrane zinc-ribbon metal-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.1     0.038        48      36      53 ..     338     356 ..     334     357 .. 0.80
   2 ?    1.3   2.3      0.22   2.8e+02      24      51 ..     349     376 ..     349     379 .. 0.80
   3 ?    6.6   0.7    0.0049       6.3      13      50 ..     392     428 ..     387     431 .. 0.68

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.038
  zinc_ribbon_10  36 pkeeleev.kyrCpkCgal 53 
                     ++ ++++v + +C++Cga+
      EPX72004.1 338 RVVKPKRVrEHVCFNCGAT 356
                     56778888899******86 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.22
  zinc_ribbon_10  24 ICskChshnGlapkeeleevkyrCpkCg 51 
                     +C +C  +     ++++++  y C  Cg
      EPX72004.1 349 VCFNCGATQTPLWRRTADKHHYLCNACG 376
                     6888887777777999999999999998 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.0049
  zinc_ribbon_10  13 detsaknryalICskChshnGlapkeeleevkyrCpkC 50 
                     +++s+k    lIC +C+ +      ++++  + +C  C
      EPX72004.1 392 NKSSQKGPENLICANCNATKTSL-WRKNRVGQTVCNAC 428
                     4578889999******9876655.33333335566666 PP

>> Auto_anti-p27  Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.5     0.019        25      17      40 .]     349     376 ..     346     376 .. 0.88
   2 ?    4.2   0.6     0.037        48      17      40 .]     403     429 ..     399     429 .. 0.87

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.019
  Auto_anti-p27  17 tCpvC...gvPLmrdr.kggkvyCvaCd 40 
                    +C +C   ++PL r   ++  ++C aC+
     EPX72004.1 349 VCFNCgatQTPLWRRTaDKHHYLCNACG 376
                    7999*9999*****66988999*****6 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.037
  Auto_anti-p27  17 tCpvC...gvPLmrdrkggkvyCvaCd 40 
                     C +C   ++ L r+   g+++C aC+
     EPX72004.1 403 ICANCnatKTSLWRKNRVGQTVCNACG 429
                    699999999999998866899*****6 PP

>> Zn_ribbon_recom  Recombinase zinc beta ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   2.1     0.026        33       7      33 ..     349     376 ..     348     393 .. 0.76
   2 ?    6.0   1.6     0.014        17       6      34 ..     402     433 ..     401     451 .. 0.73

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.026
  Zn_ribbon_recom   7 rCgeCGspmtrrkrk.gkrhyYrCstyr 33 
                      +C +CG++ t  +r+   +h Y C+++ 
       EPX72004.1 349 VCFNCGATQTPLWRRtADKHHYLCNACG 376
                      6899999966644443688999999764 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.014
  Zn_ribbon_recom   6 lrCgeCGsp...mtrrkrkgkrhyYrCstyrr 34 
                      l+C++C+++   ++r++r g++ +  C+ y r
       EPX72004.1 402 LICANCNATktsLWRKNRVGQTVCNACGLYAR 433
                      79*******66667777778888878877765 PP

>> zf-piccolo  Piccolo Zn-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.4    0.0072       9.2      27      53 ..     346     375 ..     338     381 .. 0.73
   2 ?    1.1   4.0      0.36   4.6e+02      28      36 ..     422     430 ..     388     438 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0072
  zf-piccolo  27 kkqvCnlCGFnptp...hltekkeWlclnC 53 
                 +++vC  CG   tp    +++k+ +lc  C
  EPX72004.1 346 REHVCFNCGATQTPlwrRTADKHHYLCNAC 375
                 577888888888883322344778888888 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.36
  zf-piccolo  28 kqvCnlCGF 36 
                 ++vCn+CG 
  EPX72004.1 422 QTVCNACGL 430
                 789999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (520 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       549  (0.0306208); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.44
# Mc/sec: 3563.35
//
Query:       EPX72005.1  [L=343]
Description: NADPH-dependent methylglyoxal reductase GRE2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.9e-17   63.5   0.1    6.8e-17   61.7   0.1    1.8  1  Epimerase        NAD dependent epimerase/dehydratase family
      2e-15   56.6   0.1    3.6e-15   55.7   0.1    1.4  1  3Beta_HSD        3-beta hydroxysteroid dehydrogenase/isomeras
    2.5e-12   46.8   0.1    6.9e-12   45.4   0.1    1.7  1  GDP_Man_Dehyd    GDP-mannose 4,6 dehydratase
    5.8e-11   42.0   0.0    3.1e-09   36.4   0.0    2.1  1  NAD_binding_4    Male sterility protein
    2.6e-08   34.0   0.0    4.9e-08   33.1   0.0    1.5  2  NAD_binding_10   NAD(P)H-binding
    5.2e-06   26.2   0.0    0.00053   19.6   0.0    2.3  2  NmrA             NmrA-like family
      1e-05   25.1   0.1     0.0022   17.5   0.0    2.3  2  adh_short        short chain dehydrogenase
    0.00011   21.5   0.1    0.00018   20.7   0.1    1.3  1  Polysacc_synt_2  Polysaccharide biosynthesis protein
     0.0048   16.8   0.0      0.018   15.0   0.0    1.8  1  KR               KR domain
  ------ inclusion threshold ------
       0.12   12.5   0.1       0.25   11.4   0.1    1.5  1  Ldh_1_N          lactate/malate dehydrogenase, NAD binding do


Domain annotation for each model (and alignments):
>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.7   0.1   3.8e-20   6.8e-17       1     231 [.       7     256 ..       7     264 .. 0.78

  Alignments for each domain:
  == domain 1  score: 61.7 bits;  conditional E-value: 3.8e-20
                 EEEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC............EEEE--TT-HHHHHHHHHHHT-SEEEE--S---HHHHHHSHHHH CS
   Epimerase   1 ilVtGatGfiGsalvkallekgyevigldrlssasntarledl............elveldltdrsalerlfkeeqpdavihlAavggvaassedpadf 87 
                 +lVtG+tGfiG++++  l + gy v g  r  ++ +      l             +v  d+  ++a+++++k  ++d++ h+A    +++  +++a++
  EPX72005.1   7 VLVTGVTGFIGAHVAVSLVQSGYAVRGTVRSMEKAE--D---LvrlnpelkdkveFVVVKDIVAPNAFDNAVK--NCDYICHVASPFFYENLTDNKAQL 98 
                 79*************************999933332..2...2234678999998888889************..9*******99************** PP

                 HHHHTHHHHHHHHHHHHH.TCTEEEEEEEGGGGT..............SCSS.SS..BSTCSTTS----SSHHHHHHHHHHHHHHHHHHHHT..-EEEE CS
   Epimerase  88 ieknlqgtlnlleaarka.gvkrllflsSsevYG..............kdae.qp..keettltgplkpnspYaaaKlageklveayaaqyg..lnaii 166
                 ++   +gt+n+lea+    +vkr++  sS+ +                k  +  p   e+ +  +  +  s+Y a+K  +e  ++++ ++ +  +++++
  EPX72005.1  99 LDPAYKGTMNILEASCNEpKVKRVVITSSTVTICdfnkepytgyryteK--DwNPitYEDAL--TTKNGFSAYCASKKFAEISARNFVKEKQphFDMCT 193
                 **************98777999999999977777466666666644321..12344233333..233889******************999555***** PP

                 EEESEEESTT.......S-TTSTTSHHHHHHHHHHTTSSSEEEETTST-EEEEEEHHHHHHHHHHHHHHHTT CS
   Epimerase 167 lrlfnlyGpr.......ngegevsrvipalirkilegkqevtllgdgtalRdflyveDvaeaillvlehvda 231
                 +++  ++Gp        +  ++ +rvi  li+  +++  +   +         ++v+D+a+a++ +l++++ 
  EPX72005.1 194 VNPALVVGPPihpmnnmESLNTSDRVIWSLINGSHSQP-SEQAIQ--------VDVRDIARAHVIALDKPEL 256
                 *********99877642223336778888888887776.444443........899999***9999999876 PP

>> 3Beta_HSD  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.7   0.1     2e-18   3.6e-15       1     230 [.       8     252 ..       8     294 .. 0.76

  Alignments for each domain:
  == domain 1  score: 55.7 bits;  conditional E-value: 2e-18
   3Beta_HSD   1 vvtGgaGFlGralvkeLvrlee..lkevrvlDlrespelleelskvnvkkviegDvtdkdkleealegvdvvihlaslvdvag.kltedeimkvnvkGT 96 
                 +vtG +GF+G+++  +Lv+ +     +vr++ ++e+   l+   k +v+ v+  D+   +  ++a+++ d + h+as     + ++++ ++ +  +kGT
  EPX72005.1   8 LVTGVTGFIGAHVAVSLVQSGYavRGTVRSMEKAEDLVRLNPELKDKVEFVVVKDIVAPNAFDNAVKNCDYICHVASPFFYENlTDNKAQLLDPAYKGT 106
                 69******************9865569*****8888888888888888888888***********************99888867788899******** PP

   3Beta_HSD  97 rnvlea.cvkagvrvlvYtSsaevvgpnslgeeilng...dEeleyesl.........hqdaypesKalaEklvlkaNgrtlkngg.rlyTcaLRpagi 181
                  n+lea c +  v+++v tSs   + + +++e+ + g    E+   + +           +ay  sK+ aE   ++a +  +k+ + ++  c + pa +
  EPX72005.1 107 MNILEAsCNEPKVKRVVITSSTVTICD-FNKEPYT-GyryTEKDWNPITyedalttknGFSAYCASKKFAE---ISARN-FVKEKQpHFDMCTVNPALV 199
                 ****9769999***********99999.7777665.31113444333331111221114568899999999...45555.6888888999999****** PP

   3Beta_HSD 182 yGegdkllvp..llkqlaklglalfki..gdeevlsdrvYvgNvawahilAar 230
                  G+  + + +  +l+++ +   +l++    +++  +  v v  +a ah++A  
  EPX72005.1 200 VGPPIHPMNNmeSLNTSDRVIWSLINGshSQPSEQAIQVDVRDIARAHVIALD 252
                 **976655431144555554444443300333444456778899999999975 PP

>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.4   0.1   3.8e-15   6.9e-12       1     168 [.       8     182 ..       8     196 .. 0.73

  Alignments for each domain:
  == domain 1  score: 45.4 bits;  conditional E-value: 3.8e-15
                    EEETTTSHHHHHHHHHHHHCT-CCEEEEEEESS-TTHHHHHCTTT...TTGCCEEE.EE--TT-HHHHHHHHHHHT-SEEEE--S---HHHHTTSH CS
  GDP_Man_Dehyd   1 LiTGiaGfiGsylaelLlekgyevhgivrrsssfntgriehlakdpkeeleenlkl.hkgDltDssslerllaevqpdevynLAAqshVdvsfekP 95 
                    L+TG++GfiG+++a  L++ gy v g+vr  ++  ++ + +l   p+  l++++++ +  D+   ++ +++++++  d + + A   + ++  ++ 
     EPX72005.1   8 LVTGVTGFIGAHVAVSLVQSGYAVRGTVRSMEK--AEDLVRLN--PE--LKDKVEFvVVKDIVAPNAFDNAVKNC--DYICHVASPFFYENLTDNK 95 
                    9**************************986655..66776764..43..44555541567*************98..9****************** PP

                    HHHHHHHTHHHHHHHHHHHHCT..TTSEEEEEEEGGGG-S-SSSSB.....-TT...........S-----SHHHHHHHHHHHHHHHHH CS
  GDP_Man_Dehyd  96 eytaevnvlGtlrLLeairalglekkvrfyqaStsEvYGkvqevpq.....tEt...........tpfyPrsPYaaaKlyadwivvnyr 168
                    ++ ++    Gt+++Lea   ++  k +r++++S+     + ++ p+     tE+           t  +  s Y a+K +a+  ++n+ 
     EPX72005.1  96 AQLLDPAYKGTMNILEAS--CNEPKVKRVVITSSTVTICDFNKEPYtgyryTEKdwnpityedalTTKNGFSAYCASKKFAEISARNFV 182
                    *****************8..555566788777776555555544441112234344444444444555556667777777766666665 PP

>> NAD_binding_4  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.4   0.0   1.7e-12   3.1e-09       1     221 [.       9     219 ..       9     237 .. 0.77

  Alignments for each domain:
  == domain 1  score: 36.4 bits;  conditional E-value: 1.7e-12
                    EE-TTSHHHHHHHHHHHHHS-.TEEEEEE-SSSHHHHHHHHHHHT-SS-HHHHHHHHHTTTEEEEE--TTSGGGG--HHHHHHHHHH--EEEE--S CS
  NAD_binding_4   1 lTGaTGFLGkvLlekLLrttpevkiyllvRaksgesaeeRleeelekkelfsallkelaerikvveGDlseprlGLseedlqelaeevdviihsaA 96 
                    +TG+TGF+G+++   L+++     +   vR+ ++++ + Rl+ el++     ++         vv+ D+  p+      ++++ ++++d i+h+a 
     EPX72005.1   9 VTGVTGFIGAHVAVSLVQSGY--AVRGTVRSMEKAEDLVRLNPELKD-----KVE-------FVVVKDIVAPN------AFDNAVKNCDYICHVAS 84 
                    7****************9998..799999*99999999999444333.....332.......35677998877......9***************9 PP

                    S-...S.STTSSEEHHHHHHHHHHHHHHHT.SSS--.-EEEEEEGGGTTS-TTT--SSS-H......HHH--EEEETTTCCCHHHHHHHHHHHHHH CS
  NAD_binding_4  97 tv...nfdepykellrvNveGtrevlelak.klkklkvllhvSTayvngeregeveekvyeegekeekldederaklkglpntYeqsKalaEklvr 188
                         n++++  +ll++  +Gt ++le +  + k ++v++  ST ++++ +++  +   y e++ + +++ed++++++g++ +Y  sK  aE   r
     EPX72005.1  85 PFfyeNLTDNKAQLLDPAYKGTMNILEASCnEPKVKRVVITSSTVTICDFNKEPYTGYRYTEKDWNPITYEDALTTKNGFS-AYCASKKFAEISAR 179
                    8733355567777**************97724555566777777777777777888888999999999***********96.7*********9999 PP

                    HHHHHH..---EEEEEE-EEE-...-SSS..T---TTSHH CS
  NAD_binding_4 189 earrrs..glpvvivRpsiitg...eskt..Gwingsdlg 221
                    +  +++  ++ ++ v p  ++g   ++++   ++n+sd++
     EPX72005.1 180 NFVKEKqpHFDMCTVNPALVVGppiHPMNnmESLNTSDRV 219
                    887653114568**********777555522345555544 PP

>> NAD_binding_10  NAD(P)H-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.1   0.0   2.7e-11   4.9e-08       1      99 [.      11     128 ..      11     180 .. 0.77
   2 ?   -3.1   0.0       3.5   6.3e+03      62      78 ..     217     235 ..     211     253 .. 0.43

  Alignments for each domain:
  == domain 1  score: 33.1 bits;  conditional E-value: 2.7e-11
                     TTTSHHHHHHHHHHHHC-T-EEEEEETTHHHCHHHH.....CTTTCE.EEE--TT-CCHHHHHHTT-SEEEES-........--TCCHHHH.... CS
  NAD_binding_10   1 GAtGkvGrllvkellargghevtalvRnpeklaele.....aeegle.vvegdvtdvedlaealkgadaVvsal........ggggkdeeg.... 77 
                     G tG +G +++  l+++ g++v+  vR+ ek+++l       ++++e vv+ d+  +++  +a+k++d ++  +             d+++    
      EPX72005.1  11 GVTGFIGAHVAVSLVQS-GYAVRGTVRSMEKAEDLVrlnpeLKDKVEfVVVKDIVAPNAFDNAVKNCDYICHVAspffyenlT----DNKAqlld 100
                     78***************.5*************97643322223466646667****************998888666655331....22223455 PP

                     .....HHHHHHH.HHHCT--EEEEEEET CS
  NAD_binding_10  78 .....aknivda.akeagvkRfvlvsai 99 
                          + ni++a ++e +vkR+v+ s+ 
      EPX72005.1 101 paykgTMNILEAsCNEPKVKRVVITSST 128
                     56677*****98578899*****99985 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 3.5
                     SEEEES-..--TCCHHHHH CS
  NAD_binding_10  62 daVvsal..ggggkdeega 78 
                     d V+++l  g++++ +e+a
      EPX72005.1 217 DRVIWSLinGSHSQPSEQA 235
                     5555555322222222221 PP

>> NmrA  NmrA-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   2.9e-07   0.00053       1      73 [.       7      84 ..       7     124 .. 0.79
   2 ?    4.4   0.0     0.014        24     172     224 ..     228     280 ..     201     283 .. 0.74

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 2.9e-07
                EEESSTTSHHHHHHHHHHHHHT-EEEEEES-S.....-SHHHHHHHHSTTEEEES-TT-HHHHHHHHTT-SEEEE--- CS
        NmrA  1 IlviGaTGrqGksvvrallkaghkvralvRdt.....kselakslkeaGvelvkgdlddkeslvealkgvdvvfsvtg 73
                +lv+G TG +G++v+  l+++g+ vr  vR          l  +lk++   +v  d+   +  ++a+k+ d +  v +
  EPX72005.1  7 VLVTGVTGFIGAHVAVSLVQSGYAVRGTVRSMekaedLVRLNPELKDKVEFVVVKDIVAPNAFDNAVKNCDYICHVAS 84
                79*****************************96543333345688888777779999999999999999998766654 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.014
                 SS-TTS-EE.-HHHHHHHHHHHHHHHHHHHTTEEEEE-SEEE-HHHHHHHHHHH CS
        NmrA 172 pgnpkavll.daeeDiGafvikilkdprklkgkriklagntlsgneivelfekk 224
                 +++p++  + ++++Di+++ + +l++p+  +g++  +++  l  n+i++++ +k
  EPX72005.1 228 HSQPSEQAIqVDVRDIARAHVIALDKPELSNGRM-IVSEGPLFTNDICKILRQK 280
                 55666666678*******9998888876656655.5788899999***998776 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   1.2e-06    0.0022       3      71 ..       7      76 ..       5      80 .. 0.88
   2 !    5.3   0.0    0.0065        12     143     180 ..     161     197 ..     153     211 .. 0.80

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 1.2e-06
                EEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHTTSEEEEEE-.TTTSHHHHHHHHHHH CS
   adh_short  3 vlvtGassGIGraiakelakeGakvvvvdrseekleevakelkeegakalaiqv.Dvtdreevealveka 71
                vlvtG ++ IG  +a  l+++G+ v  + rs ek+e ++    e+++k+ ++ v D+   ++ +++v+++
  EPX72005.1  7 VLVTGVTGFIGAHVAVSLVQSGYAVRGTVRSMEKAEDLVRLNPELKDKVEFVVVkDIVAPNAFDNAVKNC 76
                9**************************************9999998888776543888888888888765 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.0065
                 -TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEES CS
   adh_short 143 vagvaaYsAsKaavagltrslakelaptgirvnavaPG 180
                  +g++aY+AsK + +  +r++ ke +p+     +v+P+
  EPX72005.1 161 KNGFSAYCASKKFAEISARNFVKEKQPH-FDMCTVNPA 197
                 5789*********999999999998888.555555555 PP

>> Polysacc_synt_2  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.1     1e-07   0.00018       1     128 [.       7     127 ..       7     136 .. 0.84

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 1e-07
                      EEEETTTSHHHHHHHHHHHHHB-SEEEEEES-HHHHHHHHHH......-TTEEEE....E--TT-HHHHHHHTT..T-SEEEE------HHHHH CS
  Polysacc_synt_2   1 vlvtGagGsiGselvrqilkkkpkkiillerdElklyeiekeleeelkkkklkveivpvigdvrdkerlekaleelkvdvvfhaAAlKhVPlve 94 
                      vlvtG +G iG ++   ++++  +    + + E++ + ++ +   elk+ k+++    v+ d+   +  ++a++  ++d++ h+A       + 
       EPX72005.1   7 VLVTGVTGFIGAHVAVSLVQSGYAVRGTVRSMEKAEDLVRLNP--ELKD-KVEFV---VVKDIVAPNAFDNAVK--NCDYICHVASPFFYENLT 92 
                      89******************97766666666666655555443..3344.66555...99**************..****************** PP

                      HSHHHHHHHHHHHHHHHHHH.HHHTT-SEEEEEEE CS
  Polysacc_synt_2  95 enpleaiktNvlgtenviea.aieagvkkvvliSt 128
                       n ++ ++    gt+n++ea + e +vk+vv+ S+
       EPX72005.1  93 DNKAQLLDPAYKGTMNILEAsCNEPKVKRVVITSS 127
                      ******************98356779*****9996 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0     1e-05     0.018       1     142 [.       5     133 ..       5     140 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 1e-05
                 SEEEEETTTSHHHHHHHHHHHHHH.S-EEEEE-SS..--HHHHHHHHHHHHTT-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE---------TT CS
          KR   1 gtylitGGlGgLGlelarwlaekg.arhlvllsRsaaadedskaliaelealgaevevvaaDvsdkdavealleeikaeeppikGvihaAgvlrdklle 98 
                 g +l+tG +G +G ++a  l+++g a +   + Rs ++ ed  +l  el++  +e  vv+ D+  ++a  +++++++        + h A  +  + l 
  EPX72005.1   5 GLVLVTGVTGFIGAHVAVSLVQSGyAVR--GTVRSMEKAEDLVRLNPELKD-KVEFVVVK-DIVAPNAFDNAVKNCD-------YICHVASPFFYENL- 91 
                 679*********************5544..445554456666666777776.45665555.9***********9998.......58888876655444. PP

                 T--HHHHHHHHTTTTHHHHHHHHHTTT.S--SEEEEEEEHHHHH- CS
          KR  99 emtaedleqvlapKvkGawnLhelled.esldffvlfSSiagllg 142
                    +++ +q+l p  kG+ n+ e++ +  +++ +v++SS  +++ 
  EPX72005.1  92 ---TDNKAQLLDPAYKGTMNILEASCNePKVKRVVITSSTVTICD 133
                 ...345578899999999998777655378999999999988765 PP

>> Ldh_1_N  lactate/malate dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   0.00014      0.25       3      77 ..       7      83 ..       6      86 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00014
                EEEETTTSHHHHHHHHHHHHTTSSSEEEEE-SSHH.HHHHHHHHHHHCHCCSTS-EEEEE.SSGGGGTTESEEEE-- CS
     Ldh_1_N  3 vavvGaaGgiGqslalllankkladelaLlDiake.kleGvaldlshistflsvkvkvse.keeealkdadvvvita 77
                v v+G++G+iG+++a++l+++++a + ++  ++k+ +l     +l++   f++vk +v      +a+k++d+++ +a
  EPX72005.1  7 VLVTGVTGFIGAHVAVSLVQSGYAVRGTVRSMEKAeDLVRLNPELKDKVEFVVVKDIVAPnAFDNAVKNCDYICHVA 83
                78*******************99998666666665566667778888877777777666658889999999988666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       436  (0.0243181); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.56u 0.29s 00:00:00.85 Elapsed: 00:00:00.46
# Mc/sec: 2258.98
//
Query:       EPX72006.1  [L=215]
Description: RWD domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-21   77.1   2.3    1.3e-21   77.1   2.3    2.0  2  RWD       RWD domain
    1.4e-07   31.9   7.9    1.5e-07   31.8   6.3    1.9  1  DFRP_C    DRG Family Regulatory Proteins, Tma46
    0.00057   19.8   4.0      0.001   18.9   4.0    1.3  1  DUF445    Protein of unknown function (DUF445)
  ------ inclusion threshold ------
      0.093   13.1   0.1       0.27   11.6   0.1    1.7  2  LEP503    Lens epithelial cell protein LEP503


Domain annotation for each model (and alignments):
>> RWD  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.1   2.3   2.8e-25   1.3e-21       3     115 ..       5     110 ..       3     111 .. 0.93
   2 ?   -1.3   1.0      0.59   2.6e+03      79      99 ..     165     185 ..     117     193 .. 0.63

  Alignments for each domain:
  == domain 1  score: 77.1 bits;  conditional E-value: 2.8e-25
                 HHHHHHHHHHHSTTTCCCCHT--EE--S-EEEEEEECECCCC....TT-CEEEEEEEEE-SSTTSS--EEEEEECC...SS-HHHHHHHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxx RF
         RWD   3 qeqEleaLesIypdefevienenysikleikikldededeedsefeekkkpslkleiklpeeYPeeaPiislsste...nlpkeqvksleekleelaee 98 
                  e+E e+LesIypdef++++++ ++    i+ ++d++e+++      +++ps+ ++ +l+ eYP+e+P+++++ +    +l +eq+k+l e +++ aee
  EPX72006.1   5 IEEEKEILESIYPDEFKCLDERTFQ----ITQTIDPEESNC------SDPPSVIFIATLSDEYPNEIPEMKIRISPphrWLGEEQMKCLREVVHQNAEE 93 
                 689*****************99999....999999998886......68*******************9999888888********************* PP

                 TTTS--CHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxx RF
         RWD  99 nlgepvifalidwlken 115
                 +lg++++f+l++ lke+
  EPX72006.1  94 CLGMAMVFSLCSILKEE 110
                 ***************98 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.59
                 SS-HHHHHHHHHHHHHHHHHT CS
                 xxxxxxxxxxxxxxxxxxxxx RF
         RWD  79 nlpkeqvksleekleelaeen 99 
                 ++ ke  ++l e l+++ ++n
  EPX72006.1 165 EIRKENEEKLREALNSTSNSN 185
                 355555555555555555554 PP

>> DFRP_C  DRG Family Regulatory Proteins, Tma46
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.8   6.3   3.3e-11   1.5e-07       8      73 ..     134     213 ..     130     215 .] 0.82

  Alignments for each domain:
  == domain 1  score: 31.8 bits;  conditional E-value: 3.3e-11
      DFRP_C   8 iEteRakLdkklTpvtletFakWKkkrlekkeaeeekeekkkkke.................glsGrelfefnpelaedddee 73 
                 iE e ak ++  Tpvt+e+F+kWKk+  + +++e +ke+++k +e                 +l+Gr+lfe  + ++ dd+e+
  EPX72006.1 134 IELENAKFQG--TPVTVESFMKWKKDFDIWRDEEIRKENEEKLREalnstsnsnvkksilekKLTGRQLFER-NMVKVDDSED 213
                 7778888877..**************9998888888888877777789999*******************94.4455555544 PP

>> DUF445  Protein of unknown function (DUF445)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   4.0   2.3e-07     0.001     153     274 ..      74     195 ..      68     208 .. 0.84

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 2.3e-07
      DUF445 153 llkdeevkekikelidelieeesgklvlesivsmflreltsilekvksdpdhllreeedkkvreliadllndpelaakveklkkk...klsdlevqeye 248
                 +l +e+ k  ++e++++++ee  g+ + +s+ s + +e+++il k  ++++++++++++++++ + a+++  p + +++ k+kk+     ++++++e+e
  EPX72006.1  74 WLGEEQMK-CLREVVHQNAEECLGMAMVFSLCSILKEEVNTILCKQCEKEEKEIEDRQNREIELENAKFQGTPVTVESFMKWKKDfdiWRDEEIRKENE 171
                 66655555.9*************************************************************************9733234555566666 PP

      DUF445 249 ealwealkdlllkdlneeesllreri 274
                 e+l eal++    ++++  s l++++
  EPX72006.1 172 EKLREALNSTSNSNVKK--SILEKKL 195
                 66888888888877777..3566554 PP

>> LEP503  Lens epithelial cell protein LEP503
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   6.1e-05      0.27      17      60 ..      73     122 ..      63     125 .. 0.80
   2 ?   -2.2   0.0       1.2   5.3e+03      10      37 ..     177     205 ..     172     207 .. 0.64

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 6.1e-05
      LEP503  17 ralGdaalrv......GtGkrllggnmayGliqslkellyillCCWCike 60 
                 r lG+  ++           + lg  m + l   lke +  +lC  C ke
  EPX72006.1  73 RWLGEEQMKClrevvhQNAEECLGMAMVFSLCSILKEEVNTILCKQCEKE 122
                 5566655555555555566789*************************998 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1.2
      LEP503  10 alPssfrralGdaalrv.GtGkrllggnm 37 
                 al s+   ++  + l    tG++l+  nm
  EPX72006.1 177 ALNSTSNSNVKKSILEKkLTGRQLFERNM 205
                 55555566666665654468888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1225  (0.0683251); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.46
# Mc/sec: 1401.69
//
Query:       EPX72007.1  [L=93]
Description: hypothetical protein SOCG_06181 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       471  (0.0262703); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 697.96
//
Query:       EPX72008.1  [L=228]
Description: hypothetical protein SOCG_06182 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
       0.78    9.3  14.7        1.1    8.8  14.7    1.1  1  ABC2_membrane_5  ABC-2 family transporter protein


Domain annotation for each model (and alignments):
>> ABC2_membrane_5  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8  14.7     6e-05       1.1      79     194 ..      22     149 ..      17     154 .. 0.63

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 6e-05
  ABC2_membrane_5  79 VksKYlfvlililiailitllllii..a..vlikgnvtisevllsiliglvialiflaivlPlyfkfgvekgrivliiiifgiifllvaifsl. 167
                      + sK ++++ l+++a+l ++ ++ i  +   ++k +v  ++++  +  +++ +++fl++   ly  +  + gr++  ++ ++i+  + +++ + 
       EPX72008.1  22 IYSKWIIIIYLFFFASLGYIGAYCIllVmfFYFKVPVRAQDFWGLFGGFIGAISLFLCLAHMLYPGWYKQAGRVLPNMCAAVICTASLNVVGFv 115
                      66777776666666555554443321120034666699999999999999999999888888888888889**966666666555444444433 PP

  ABC2_membrane_5 168 .....skl.els.lidlsnyilliillviillli 194
                           +k+  ++ ++d+  y ++++ +++++l++
       EPX72008.1 116 fyrnvKKIiGFEkMNDIAFYGVWFVNVAVFVLFW 149
                      3333555534446777777888887777665444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       668  (0.0372581); expected 358.6 (0.02)
Passed bias filter:                      268  (0.0149478); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1617.27
//
Query:       EPX72009.1  [L=248]
Description: copper transporter complex subunit Ctr4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-28  100.8  11.4    1.7e-28  100.1  11.4    1.3  1  Ctr         Ctr copper transporter family
  ------ inclusion threshold ------
      0.076   13.0   0.9       0.14   12.2   0.9    1.4  1  SK_channel  Calcium-activated SK potassium channel


Domain annotation for each model (and alignments):
>> Ctr  Ctr copper transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.1  11.4   1.9e-32   1.7e-28       1     148 []      77     209 ..      77     209 .. 0.84

  Alignments for each domain:
  == domain 1  score: 100.1 bits;  conditional E-value: 1.9e-32
         Ctr   1 mlFhwstddt.ilfrsWritskgqlagsciglfllaifyeflralrerlerewdrhlarsre.krkaassplvdssssseeeaeakstsslskseakks 97 
                 m+++w+t+d+ ++ ++W+i+sk +++gs++g++++ + +e++r    rl+re+dr+  r+++ +++ a  ++++             +s  ++s++  s
  EPX72009.1  77 MYWNWYTIDAcFITKHWHIRSKSMFVGSIFGIIFMMMAMELVR----RLQREFDRWCIRQSQyRSSLACHHSPE-------------SSFVHSSSNGFS 158
                 9******************************************....999999999965555244444444443.............233444555666 PP

         Ctr  98 vrttpeqqlirallyvvqvllaYilMLlvMtyNvglflavilGagvGeflf 148
                 + t++  ++ir++ly++q+++ Yi MLl+M+yN++++l ++ G+++G flf
  EPX72009.1 159 WFTRVCFHFIRSCLYIIQFIVTYIAMLLAMYYNGYVILFLFCGTFLGFFLF 209
                 6666666******************************************98 PP

>> SK_channel  Calcium-activated SK potassium channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.9   1.5e-05      0.14      19      70 ..     100     181 ..      87     199 .. 0.64

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.5e-05
  SK_channel  19 aLvlalfGivlmvvetEllalavtekl...................................sivslalkvlisl..sTviLLvlivly 70 
                  +v  +fGi++m++ +El+     e +                                   +       v+  +  s + ++ +iv+y
  EPX72009.1 100 MFVGSIFGIIFMMMAMELVRRLQREFDrwcirqsqyrsslachhspessfvhsssngfswftR-------VCFHFirSCLYIIQFIVTY 181
                 345569************986555555888888888888888888888888888855544442.......4433322333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1118  (0.0623571); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1784.31
//
Query:       EPX72010.1  [L=108]
Description: nuclear telomere cap complex subunit Ten1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.8e-13   48.6   0.1    8.5e-13   48.3   0.1    1.1  1  Ten1      Telomere capping, CST complex subunit
  ------ inclusion threshold ------
      0.012   15.3   0.0       0.02   14.6   0.0    1.4  1  Ten1_2    Telomere-capping, CST complex subunit


Domain annotation for each model (and alignments):
>> Ten1  Telomere capping, CST complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.3   0.1   9.4e-17   8.5e-13      11     121 .]       4      96 ..       2      96 .. 0.94

  Alignments for each domain:
  == domain 1  score: 48.3 bits;  conditional E-value: 9.4e-17
                 HCCH-CCGGGCTTCTEEEEEEEEEEEEECCCTEEEEEECCEE.......EEEE-TTTTTTS.GGGGSTT-EEEEEEEEECTTE......EEEEEEEE-T CS
        Ten1  11 ltllflselaslsegkkvRfLgcvseYkvetghLtlehnyprkksapssvsvdinavLesvkaeelqvGawvnvvGyvreeksskrsvyveavmifsag 109
                 ++l+ l+++ +++ g+kvRfLg v++Y   +g L l+++          v++d  avL +v   ++q+ +w+ +vG   ++ +      v+++ + s+ 
  EPX72010.1   4 TRLVSLEQIENCPVGQKVRFLGYVHSYV--NGILCLQDGSSM-------VECDLAAVLGHV---KIQIREWLDIVGRKCSDGK------VDVLLVRSVV 84 
                 678899*********************9..9******97776.......************...9************999995......********** PP

                 CGGHHHHHHHHH CS
        Ten1 110 aveLgeyervlq 121
                 +++L +y+++lq
  EPX72010.1  85 GMDLPKYRKALQ 96 
                 ********9997 PP

>> Ten1_2  Telomere-capping, CST complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   2.3e-06      0.02      17     113 ..      14     100 ..       3     104 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 2.3e-06
      Ten1_2  17 slkegssvRtlGrLksydvatsratltakeeskqaelkvetdl.vepfearlgslyqviGelekekedgeivlrARvlrcvdgldldlyekaleerrk 113
                 + + g+ vR lG ++sy   + +  l    +++++ ++++    + +++ ++     ++G   ++  ++  vl    +r v g+dl+ y+kal+ r++
  EPX72010.1  14 NCPVGQKVRFLGYVHSY--VNGILCL----QDGSSMVECDLAAvLGHVKIQIREWLDIVGRKCSD--GKVDVL---LVRSVVGMDLPKYRKALQWRQE 100
                 56789999*****9999..6888888....999999***9988799********99999976554..555555...68899*************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       279  (0.0155614); expected 358.6 (0.02)
Passed bias filter:                      266  (0.0148363); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 804.15
//
Query:       EPX72011.1  [L=197]
Description: ribosomal protein subunit L20 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.9e-25   88.1   1.8    8.7e-25   87.8   1.8    1.1  1  MRP-L20      Mitochondrial ribosomal protein subunit L20
  ------ inclusion threshold ------
       0.09   13.0   0.1          2    8.6   0.0    2.1  2  GH114_assoc  N-terminal glycosyl-hydrolase-114-associated dom


Domain annotation for each model (and alignments):
>> MRP-L20  Mitochondrial ribosomal protein subunit L20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.8   1.8   9.7e-29   8.7e-25      22     161 ..      46     186 ..      17     188 .. 0.81

  Alignments for each domain:
  == domain 1  score: 87.8 bits;  conditional E-value: 9.7e-29
     MRP-L20  22 eesfgliynPpssapsvshtPtkFL...PksdprrellaakeskassksselPpvlkkkse....kekkyhltkedieeirrLraeDPekwsrkkLakk 113
                 ++s+ ++ynPp+s+p  ++tP+ F    P+ ++r +l+++ +s         P+v +k+ +    ++ +++lt e+ + i +Lr+++P++w++  L+kk
  EPX72011.1  46 DASSDVYYNPPASSPDIRITPLLFRydaPSAEARTTLAKKLTSSL------SPVVSRKSMPkgnlRYSTNQLTDEEKKAIHDLRLSNPDEWTTGTLSKK 138
                 33445*******************888799999977744444333......3333333333444456779***************************** PP

     MRP-L20 114 FgcsklfvsmvteapkekkkeveaeleavkerWgekrriaredRkkRk 161
                 F++++l vs v+eap e+ ++ve+el + k rWg+ +r++r+++  R 
  EPX72011.1 139 FQVTRLVVSRVCEAPGERLATVEEELDQQKLRWGKAKRQVRREKLSRN 186
                 ******************************************998886 PP

>> GH114_assoc  N-terminal glycosyl-hydrolase-114-associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0    0.0088        79      25      48 ..      46      69 ..      35      73 .. 0.79
   2 ?    8.6   0.0   0.00023         2      30      95 ..      69     136 ..      65     153 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.0088
  GH114_assoc 25 gaqaefefslPsavadadvssltl 48
                  a+ ++++++P++ +d  +  l +
   EPX72011.1 46 DASSDVYYNPPASSPDIRITPLLF 69
                 68899*********9999887765 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00023
  GH114_assoc  30 fefslPsavadad.vssltlevsalvptksgdrWkvdl.flddkakkwekvgDlaaagsgdWttitlt 95 
                  f++ +Psa a  + +++lt ++s +v  ks  + ++    ++ + ++ + + Dl   +  +Wtt tl+
   EPX72011.1  69 FRYDAPSAEARTTlAKKLTSSLSPVVSRKSMPKGNLRYsTNQLTDEEKKAIHDLRLSNPDEWTTGTLS 136
                  89****99877663689*************99999999667777788899**************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       618  (0.0344693); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.44
# Mc/sec: 1353.83
//
Query:       EPX72012.1  [L=110]
Description: hypothetical protein SOCG_03945 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.066   14.2   0.3       0.13   13.2   0.2    1.6  1  Tox-SHH   HNH/Endo VII superfamily toxin with a SHH signature
       0.47    9.9   2.0       0.39   10.2   0.7    1.4  2  DUF1129   Protein of unknown function (DUF1129)
        1.7    9.2   8.5         27    5.4   8.5    2.2  1  YtxH      YtxH-like protein


Domain annotation for each model (and alignments):
>> Tox-SHH  HNH/Endo VII superfamily toxin with a SHH signature
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.2   2.3e-05      0.13      22      62 ..      19      60 ..      10     103 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.3e-05
     Tox-SHH 22 yggysrgsaPailLesenHaaikavqre.rrtgkkvgGkvgw 62
                y  ++r++ Pa  Le++n + ++a+ re rr  + vg  ++ 
  EPX72012.1 19 YMFMNRNKQPANQLEQKNADFVNAIEREgRRFDRAVGDTADK 60
                556899**********************87777777765432 PP

>> DUF1129  Protein of unknown function (DUF1129)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       0.6   3.6e+03     187     199 ..      12      24 ..       8      28 .. 0.51
   2 ?   10.2   0.7   6.5e-05      0.39       2      72 ..      32     107 ..      31     109 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 0.6
     DUF1129 187 gviafvvryylkk 199
                 ++ a v+++++++
  EPX72012.1  12 AAGAAVAYMFMNR 24 
                 4444444444444 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 6.5e-05
     DUF1129   2 LtkkNqeyifrltkq...L.kkkglsdeekeeileevlpelleaQkkG.ktArqLygtptekaeellekkkkakke 72 
                 L +kN++++  ++++   + ++ g + +++++ +++  ++++++ +k    A +L g +++k++e l++++k+ ++
  EPX72012.1  32 LEQKNADFVNAIEREgrrFdRAVGDTADKAKTFVQDSKDKVVNELEKPrEDAHELEGEVKTKTNEALNSPNKKDQS 107
                 889*********976333777889999***************997765167******************9998876 PP

>> YtxH  YtxH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   8.5    0.0046        27      33      70 ..      39      97 ..       7     101 .. 0.70

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0046
        YtxH 33 k..............addlkekakelleeakeka.......kekaedlkekvkekadel 70
                               + d+++kak ++++ k+k+       +e a +l  +vk k++e+
  EPX72012.1 39 FvnaieregrrfdraVGDTADKAKTFVQDSKDKVvnelekpREDAHELEGEVKTKTNEA 97
                25555555555555588999999999999999999998988999999999999998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1110  (0.0619109); expected 358.6 (0.02)
Passed bias filter:                      504  (0.0281109); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 798.44
//
Query:       EPX72013.1  [L=445]
Description: DUF89 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.1e-119  399.5   0.0   1.3e-119  399.4   0.0    1.0  1  DUF89     Protein of unknown function DUF89
  ------ inclusion threshold ------
      0.023   15.0   0.1      0.057   13.7   0.1    1.6  1  DUF3605   Protein of unknown function (DUF3605)


Domain annotation for each model (and alignments):
>> DUF89  Protein of unknown function DUF89
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  399.4   0.0  1.4e-123  1.3e-119       2     353 .]      29     423 ..      28     423 .. 0.97

  Alignments for each domain:
  == domain 1  score: 399.4 bits;  conditional E-value: 1.4e-123
                 HHTHHHHHHHHHHHHHHHHTCC...........HHHHHHHHHHHHHHHHHHHHCTTCGHHH-HHHH.............T-BTTBSBHHHHHHHHHHHH CS
       DUF89   2 leerlpciltqviddlekakde...........keeelkkiieelselkeelqtdkpltpledeee.............krswfnapwlfaecylyrrl 76 
                 + +r+p++l++vidd++++ ++            + ++k+ii+ ls+lk+++q+++pl +le+++                +w++apwl++ecy+yr +
  EPX72013.1  29 VVRRWPTMLSNVIDDISRHVSKaleagmsenssYVTQGKSIINLLSQLKYDMQHNRPLIHLEGDNSdledyneeltqcgPMTWGDAPWLYSECYFYRMM 127
                 679***************5555555666667779***************************99988********************************* PP

                 HHHHTHSGGGTTS-TTHHHHHHHHHHHHHHHHHHHHHHHHCCSH.............HHHHHHHHHHHHHHCG--CCCHT..SHHCHHHHHHHHHHHHH CS
       DUF89  77 lelfglskelknyDpFkeqKeesnksalkaveelakrleelede.............kelfkellkislwGNaiDlslla..teediqkdqeeearkal 160
                 + ++++ +e+k++DpF++qK+++++s+  ave+la r+ +l +e             ++ f e+ +++lwGNa+Dlsll+  t+e++q++q+ +a +++
  EPX72013.1 128 NLFLQAHSEWKRHDPFFDQKDSTLRSSHVAVEDLAVRYVNLDHEldalkkhpnpqaaYMIFVEMAQVALWGNATDLSLLTnlTYEELQQLQGRKAVEES 226
                 *************************************************************************************************** PP

                 HCTESEE-HHHHHHHHCTCHTSEEEEE--BTTHHHHHHHHHHHHHHHCTTTSEEEEEEBSS--TTTB-BHHHHHHHHHHHH-TTTS.HHHHCHTTHHHH CS
       DUF89 161 eknilvddleklweklkkkkakrvdivlDNaGfElvfDlllaeeLlesglatkVvlhvkaiPwfvsDvtpeDfewlleqladsksf.elsalgagldel 258
                 +kn+lv+d++k+wekl++ + +rvd+vlDNaGfEl++Dl++a +Ll++++ ++V+lh+k+iPwfvsD++++D+ +++ +l++  s  ++ +l+ +l+e+
  EPX72013.1 227 QKNVLVNDFPKVWEKLQEHPGGRVDFVLDNAGFELYVDLVFAAYLLKAKIVDTVILHPKDIPWFVSDALVNDIPHVFTSLTTYFSGeSIHQLASDLQEF 325
                 ********************************************************************************99866569*********** PP

                 HHTSEEEEESSCGGSSS--CCGSS.SHHHHHHHHHC-SEEEEEHHHHHHHHTTSCTTTTTSEHHHHT..GTSS--EEEEEE--SHHHHHHHSTTTHEE CS
       DUF89 259 lkegklvlrgssfwttglsysemp.eapelyeelekadLvifKGdlNyrkLtgdrkwppttpfttal..gfspvpvlaLrtvKadvvagllegegekl 353
                 ++egk+++r++ fwtt + + +mp  ap l+e+l+k+d+vifKGdlNyrkLtgd++wp+ttpf+ al   +++ ++laLrt+Kadvv+gl eg++ekl
  EPX72013.1 326 HAEGKILIRPNCFWTTAHYFGRMPeFAPALVEDLAKSDMVIFKGDLNYRKLTGDCEWPKTTPFDVALgpLAGKFNILALRTCKADVVVGLEEGVYEKL 423
                 ********************************************************************99************************9987 PP

>> DUF3605  Protein of unknown function (DUF3605)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   6.4e-06     0.057      11      81 ..     169     240 ..     162     245 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 6.4e-06
                 HT-GGG----HHHHHHHHHHHHHHT....TS-HHHHHHHHHT-....STTS.TTSSGGGEEEEE-SS---B- CS
     DUF3605  11 eneleklkRspsdlrrYlkfkkelkkk.ygsiveyilkerlkWeeleakeelpfadeedykillNdfPYgle 81 
                 ++el+ lk++p+ +++Y+ f++  +   +g+ ++  l ++l++eel++ + ++  +e++ ++l+NdfP   e
  EPX72013.1 169 DHELDALKKHPNPQAAYMIFVEMAQVAlWGNATDLSLLTNLTYEELQQLQGRKAVEESQKNVLVNDFPKVWE 240
                 5799****************9987754169****************99999999**************7666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (445 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       417  (0.0232584); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.44
# Mc/sec: 3051.66
//
Query:       EPX72014.1  [L=574]
Description: inorganic phosphate transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-43  148.8   8.9    6.1e-23   81.4   0.1    2.0  2  Sugar_tr  Sugar (and other) transporter
    1.8e-18   66.6  18.1    5.7e-13   48.5   1.7    2.2  2  MFS_1     Major Facilitator Superfamily
    0.00075   18.9   1.0     0.0014   18.0   0.0    1.8  2  MFS_4     Uncharacterised MFS-type transporter YbfB


Domain annotation for each model (and alignments):
>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.4   0.1     1e-26   6.1e-23       5     230 ..      45     282 ..      41     302 .. 0.87
   2 !   69.3   5.2   4.9e-23   2.9e-19     252     450 ..     345     547 ..     292     548 .. 0.79

  Alignments for each domain:
  == domain 1  score: 81.4 bits;  conditional E-value: 1e-26
                 HHHHH.HHHHHHHHCGGGTHHHHHHHHTSTT--SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTT... CS
    Sugar_tr   5 aalgg.llfgYdtgvigafltllkfaknfglsksksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgk... 99 
                 +a +g ll  Yd+++i+ ++ +l++++  gl+ +++         gl+ + +++G i+G+l++g+lgd+fGR+ ++    +l++i+++l +  +++   
  EPX72014.1  45 IAGTGfLLDSYDLFIINLVTPILSYLYWGGLEGHEDYPS---GIRGLVNAGTNIGNIMGQLIFGFLGDFFGRQFVYGKEMMLVIISTILLISLPDRlpt 140
                 4445558999************************97555...599**********************************************999889** PP

                 ..SS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHH.HTSS-...........TTHHHHHHHCCHHHHHHH CS
    Sugar_tr 100 ..nsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglgl.nktsn...........adgwrillglqlvpalll 184
                    +   l++ Rvl+Gig+G+ + ++   +sE +  + Rgal s+  +   +G lv+ i +l++ + ++            +  wri +g++l+pa l+
  EPX72014.1 141 plDKSMWLFTFRVLLGIGIGGDYPMSASITSEQSMIHRRGALLSWIFSNQGWGTLVGCIATLVIlACYRTslevhgdyhklDGVWRIQFGIALLPAFLV 239
                 *9666668999*****************************************************5555559*********999**************** PP

                 HHHGGGS---HHHHHHTT-HH..HHHHHHHHHHHCHHHHHHHHHHHHH CS
    Sugar_tr 185 lilllflPESPrylvekgkee..eakevlaklrgeedadrelaeekds 230
                 li +l + ES+ +  +k+ +   ea++  +     +d+ ++ +e ++s
  EPX72014.1 240 LIPRLRMKESKQFKDSKNVHAlnEAETNSQ-----TDDLKKNQETFTS 282
                 **********99987777655423333333.....4555666665555 PP

  == domain 2  score: 69.3 bits;  conditional E-value: 4.9e-23
                 ..HHHHHHHHHHHHHHTTHHHHHHHTTTHHHHSS-THH..........HHHHHHHHHHHHHHHHHH.HHHHHHS-SHHHHHHHHHHHHHHHHHHH..HH CS
    Sugar_tr 252 rqrlligvvlqifqqltGinaimyysptifenlglsks..........llvtiivgvvnfvatfva.iflvdrfGRRtllllGaagmaicfvilgival 339
                   rll+g ++ +f        +    ++i++++g++            +++++i+ +   v    a +fl++++GR+ + + G+a+++++f++l+    
  EPX72014.1 345 HLRLLLGSAISWFLLDIAFYGVNLNQSVILNEMGFNSGknqyrklqrnAIGNLIIAIAGYVPGYWAtVFLIEKMGRKWIQIQGFAICSLLFAVLA---G 440
                 46777777777776655555566666777777777766677778788899999999999998888879**************************8...4 PP

                 HHTTSS...CHHHHHHHHHHHHHHHTTTTHHHHHHHHHHSHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHT-HHHHHHHHHHHHHHHHHHHHS- CS
    Sugar_tr 340 llvakskaasivaivfialfialfalgwgpvpwvlvsElfpqsvRskalaiavavnwlanflisllfpiiteaigggyvflvfaglavlfiifvfffvp 438
                  + + s   + +  v+ial  ++f++g++++ +v+ +E+fp++vR++   i++a+     +l +llf  +te ig  +v ++f ++++l+iif +  +p
  EPX72014.1 441 KWHTIS---TAGRFVCIALAQFFFNFGPNTTTFVYPAEVFPSRVRAFSHGICAASGKAGAILSGLLFNKLTEVIGFDKVLWIFFACMILGIIFSL-LLP 535
                 444443...66778888888889****************************************************99***************986.69* PP

                 -STT--CCCCGG CS
    Sugar_tr 439 etkgrtleeiee 450
                 et+gr+ + +++
  EPX72014.1 536 ETAGRDADLVDR 547
                 *****9888776 PP

>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.5   1.7   9.5e-17   5.7e-13      33     259 ..      85     401 ..      46     411 .. 0.70
   2 !   19.8  14.1   5.1e-08    0.0003      41     178 ..     400     540 ..     353     569 .. 0.76

  Alignments for each domain:
  == domain 1  score: 48.5 bits;  conditional E-value: 9.5e-17
       MFS_1  33 eigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllll..fa........sslwlllvlrvlqGlgagalfpagaaliadwfpkeergr 121
                   gl+ ++  +g + ++l++G+l+d fGr  v+   + l +++ ++ll  ++         s+w l+ +rvl G+g g+ +p++a+++++ ++  +rg 
  EPX72014.1  85 IRGLVNAGTNIGNIMGQLIFGFLGDFFGRQFVYGKEMMLVIIS-TILLisLPdrlptpldKSMW-LFTFRVLLGIGIGGDYPMSASITSEQSMIHRRGA 181
                 4688999999*************************99999999.55552342444456655566.********************************** PP

       MFS_1 122 aigllsagfslGailgpllggllasslg...............Wravfyilaivsllafvlfllllpeepperkrkspkeee................. 188
                  ++++ +  + G+++g ++  ++++ +                Wr  f i+ + ++l+++    l + e ++ k ++ +  +                 
  EPX72014.1 182 LLSWIFSNQGWGTLVGCIATLVILACYRtslevhgdyhkldgvWRIQFGIALLPAFLVLI--PRLRMKESKQFKDSKNVHALneaetnsqtddlkknqe 278
                 ****************8888877755557799*************************944..5777444444444444444455566667777777777 PP

       MFS_1 189 ..................................................kgtgpaplvpawkallkdpvlwillialllfffgfsglltllplylqev 237
                                                                   + + ++ +v  +++ ++ + l+   i+++l  ++f+g+     ++    
  EPX72014.1 279 tftsadlpqpvdtakatektsgsvqveprdnsfmaskeppsdkaeqqdqeQVKSGSTFVAYFSEWRHLRLLLGSAISWFLLDIAFYGVNLNQSVI-LNE 376
                 77777777777777777777788888888888888777777777554444344444444477777777744455555555555555555555554.788 PP

       MFS_1 238 lgls...glllaglllallalvgai 259
                 +g++   + +  +   a++ l++ai
  EPX72014.1 377 MGFNsgkNQYRKLQRNAIGNLIIAI 401
                 8888766334444444444444444 PP

  == domain 2  score: 19.8 bits;  conditional E-value: 5.1e-08
       MFS_1  41 yalgaavaslplGrlsdrfGrrrvlllglllfalglllll..fa....sslw.lllvlrvlqGlgagalfpagaaliadwfpkeergraigllsagfsl 132
                   +g++ +   + +l++++Gr+++ + g+++ +l +++l+  ++    ++ +  ++++ ++  +g    +++  ++ a++fp + r++  g+ +a+  +
  EPX72014.1 400 AIAGYVPGYWATVFLIEKMGRKWIQIQGFAICSLLFAVLAgkWHtistAGRFvCIALAQFFFNFGP---NTTTFVYPAEVFPSRVRAFSHGICAASGKA 495
                 3345566666666778899****9999999999995555558833334444446888888888886...9***************************** PP

       MFS_1 133 GailgpllggllasslgWravfyilaivsllafvlfllllpeeppe 178
                 Gail  ll   l++ +g+  v +i+ + ++l+++ f lllpe++ +
  EPX72014.1 496 GAILSGLLFNKLTEVIGFDKVLWIFFACMILGII-FSLLLPETAGR 540
                 *****************99999999888888866.56777766655 PP

>> MFS_4  Uncharacterised MFS-type transporter YbfB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   2.3e-07    0.0014      31     170 ..      87     247 ..      79     270 .. 0.63
   2 ?   -1.5   0.2       0.2   1.2e+03     238     277 ..     496     535 ..     402     543 .. 0.69

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 2.3e-07
       MFS_4  31 gllaaaNylGYLvGallaaf.alsagaeRlr...llagllatvllllam....altesfaaflliRflaGvasAvvlvfgsslvlahaaaarrervgal 121
                 gl++a+  +G ++G l++ f + + g++ +    ++  +++t ll+         +++ ++++  R+l+G++ +    + +s+  +++  +rr++++++
  EPX72014.1  87 GLVNAGTNIGNIMGQLIFGFlGDFFGRQFVYgkeMMLVIISTILLISLPdrlpTPLDKSMWLFTFRVLLGIGIGGDYPMSASITSEQSMIHRRGALLSW 185
                 67777777777777777755244445554543322222333333332211111234567889999********************************** PP

       MFS_4 122 lfaGvGlGiavsgllvllllqlglsassl..........W...lalavlsavllllvalllp 170
                 +f+  G G +v+ ++ l++l+    +  +          W   +++a+l a l+l+  l ++
  EPX72014.1 186 IFSNQGWGTLVGCIATLVILACYRTSLEVhgdyhkldgvWriqFGIALLPAFLVLIPRLRMK 247
                 ************99999998876666555556666676762112333333333333333333 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.2
       MFS_4 238 aaivgvlvwlrvakrsglrralaaallieavgvllsllsp 277
                 +ai++ l+ +++ +  g+ ++l + ++   +g++ sll+p
  EPX72014.1 496 GAILSGLLFNKLTEVIGFDKVLWIFFACMILGIIFSLLLP 535
                 3455555555555555555555555555555555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (574 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       796  (0.0443973); expected 358.6 (0.02)
Passed bias filter:                      480  (0.0267723); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.68u 0.31s 00:00:00.99 Elapsed: 00:00:00.47
# Mc/sec: 3676.34
//
Query:       EPX72015.1  [L=270]
Description: hypothetical protein SOCG_03948 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      6e-09   35.8   3.9    1.2e-08   34.8   1.3    2.8  3  Complex1_LYR    Complex 1 protein (LYR family)
    0.00016   22.2   0.6     0.0007   20.2   0.2    2.3  2  Complex1_LYR_1  Complex1_LYR-like
      0.002   18.8   2.2      0.002   18.8   2.2    2.4  3  Complex1_LYR_2  Complex1_LYR-like


Domain annotation for each model (and alignments):
>> Complex1_LYR  Complex 1 protein (LYR family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.8   1.3     2e-12   1.2e-08       2      56 ..      16      70 ..      15      73 .. 0.97
   2 ?   -0.6   0.0      0.23   1.4e+03      15      32 ..     116     133 ..     113     134 .. 0.89
   3 ?   -2.9   0.1       1.3   7.6e+03       5      16 ..     237     248 ..     236     261 .. 0.67

  Alignments for each domain:
  == domain 1  score: 34.8 bits;  conditional E-value: 2e-12
  Complex1_LYR  2 qvLsLYRalLRearkfpdyntreyfrrriRdeFrknkhvtDpekieellkkgree 56
                  ++Ls Y+ lL+++++f  + +r  + + +R++ r ++h+t+ +k e+ll+ ++++
    EPX72015.1 16 ECLSVYKGLLKCCNRFVEPEYRSILSEIVRARTRHYQHLTNAYKAEHLLQNAKKY 70
                  89**************************************************998 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.23
  Complex1_LYR  15 rkfpdyntreyfrrriRd 32 
                   +k+p++++ + +  ++Rd
    EPX72015.1 116 SKLPKPQKSMSIHDYVRD 133
                   68999999*********8 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 1.3
  Complex1_LYR   5 sLYRalLReark 16 
                   +LYR +  e+++
    EPX72015.1 237 QLYRMIVMESER 248
                   688877666644 PP

>> Complex1_LYR_1  Complex1_LYR-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.2   1.2e-07    0.0007       2      52 ..      16      64 ..      15     108 .. 0.76
   2 ?   -1.5   0.0      0.67     4e+03      26      41 ..     170     185 ..     147     201 .. 0.56

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 1.2e-07
  Complex1_LYR_1  2 eklrlyrallkaarrfPlrsrreivaeevraafrhplndslttkevdykll 52
                    e l++y+ llk ++rf   + r i++e vra  rh   + lt++ + + ll
      EPX72015.1 16 ECLSVYKGLLKCCNRFVEPEYRSILSEIVRARTRHY--QHLTNAYKAEHLL 64
                    679*******************************85..4556555555544 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.67
  Complex1_LYR_1  26 vaeevraafrhplnds 41 
                      ++e r ++ + +n  
      EPX72015.1 170 KTKEHRHQLIQAMNRM 185
                     3333333333333333 PP

>> Complex1_LYR_2  Complex1_LYR-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   2.2   3.3e-07     0.002       2      63 ..      18      80 ..      17     110 .. 0.89
   2 ?   -1.6   0.0      0.81   4.8e+03      11      35 ..     173     177 ..     151     216 .. 0.57
   3 ?   -2.4   0.1       1.4   8.5e+03       3      13 ..     237     247 ..     235     261 .. 0.61

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 3.3e-07
  Complex1_LYR_2  2 lsLYrrllrelrel.ppelrslgdayvraefrrhkhlknpeeialflknqreYaellerynpg 63
                    ls+Y+ ll+  ++   pe rs + + vra+ r  +hl+n+ ++  +l+n + Y e le  n g
      EPX72015.1 18 LSVYKGLLKCCNRFvEPEYRSILSEIVRARTRHYQHLTNAYKAEHLLQNAKKYRERLELVNKG 80
                    799********77669****************************************9988766 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.81
  Complex1_LYR_2  11 elrelppelrslgdayvraefrrhk 35 
                     e+r                     +
      EPX72015.1 173 EHRH--------------------Q 177
                     2222....................2 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 1.4
  Complex1_LYR_2   3 sLYrrllrelr 13 
                     +LYr ++ e +
      EPX72015.1 237 QLYRMIVMESE 247
                     78888877663 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (270 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       788  (0.0439511); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.83
# Mc/sec: 988.24
//
Query:       EPX72016.1  [L=239]
Description: hypothetical protein SOCG_03949 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        3.8    8.2  12.1      0.087   13.5   0.9    2.3  2  Pex14_N   Peroxisomal membrane anchor protein (Pex14p) conser


Domain annotation for each model (and alignments):
>> Pex14_N  Peroxisomal membrane anchor protein (Pex14p) conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.9   4.8e-06     0.087      29      94 ..      19      81 ..      12     118 .. 0.47
   2 ?   -0.6   4.1      0.11   1.9e+03      68      93 ..     141     166 ..     110     188 .. 0.35

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 4.8e-06
     Pex14_N 29 LesKGLtqeEIeeaLkraereeeasesa..vaassas.....eqaqeesasssatpqpqaasqtsqsspspsp 94
                L+sK L++e+I +++ +++ +++   ++  v     +     +     +++  +++ + ++s+ts++s s+++
  EPX72016.1 19 LKSKSLSDEQISQLFTKSSGNSNPIINDpvV-----NlwdrlQ-----QNQVVYRSVSMPSSTTSHKSVSRDN 81
                9****************55443332222211.....1121111.....1122222222222222222222221 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.11
     Pex14_N  68 eesasssatpqpqaasqtsqsspsps 93 
                 +++ s++ +p+  +++ +s++ + ++
  EPX72016.1 141 NKPISNDDEPSDVEQEASSSQGSGTE 166
                 11111111111111111111111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1277  (0.0712254); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 1681.94
//
Query:       EPX72017.1  [L=570]
Description: alpha-amylase Aah3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.7e-51  174.3   6.5    4.7e-51  174.3   6.5    1.7  2  Alpha-amylase  Alpha amylase, catalytic domain
    1.3e-08   35.0   0.0    5.6e-08   33.0   0.0    2.0  2  DUF1966        Domain of unknown function (DUF1966)


Domain annotation for each model (and alignments):
>> Alpha-amylase  Alpha amylase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  174.3   6.5   5.2e-55   4.7e-51       1     337 []      62     372 ..      62     372 .. 0.82
   2 ?   -2.1   0.4      0.25   2.2e+03      37      69 ..     379     411 ..     374     428 .. 0.83

  Alignments for each domain:
  == domain 1  score: 174.3 bits;  conditional E-value: 5.2e-55
                    --CHHHHCTCCCCCCCT-SCEEE-B-CE........-S-TTTTSS-SCECCE-CCC--CCCCCCHHHHHHCTT-EEEEEE--SC--TTSCCCHCCH CS
  Alpha-amylase   1 GDLkGiiekLdYlkeLGvtaiwlsPifk........spqadhgYdiadytkidpefGtnedlkeLiskahekgikvilDlVvNHtsdehewfkesl 88 
                    G +kGi +kLdY+++LG+taiw+sP+ k        + qa+hgY+ ++y+k++++fGt +dl  Li++ah+ +i v++D VvN ++ +  + +   
     EPX72017.1  62 GSWKGIEQKLDYIRDLGFTAIWISPVDKniegdpnnAGQAYHGYWNTNYEKLNEHFGTEDDLISLINAAHKYDIWVMIDTVVNSMAFAGPYKD--- 154
                    89**********************************9**********************************************9988888733... PP

                    HSTTSGGGCCC-E......ESS-STTC-TTTTCSCEECTTTTCEEESSS-TTS-BB-TTTCCCCCCCCC.CCCCCCTTT-SEEEETTCCCTTTCCC CS
  Alpha-amylase  89 kkkgepkrdyyiwkegkeekeppnnwkslfdgsaweydekaqeyylhlflkklpdLnteneevrkelkd.vvkfwlekgidGfRlDvvkhvskvea 183
                         +++++y +++   ++ +p +    +++++ + ++ +q+         l+dL+ e+++v+ +l++ + + +   g dG+R+D+vk++++   
     EPX72017.1 155 ----IDYSAVYPFNSE--KYYHPYCIIDWNKNNKTNIQDCWQN-----SGVLLADLDVESNSVKSYLNKhIKQAVQHYGYDGLRIDAVKMMNE--- 236
                    ....335556654433..5666666666667777777666654.....6788*****************8889999999**************... PP

                    CHCCHCCHHHHHHHHHHHTCCGTT-EEEEE-TT-SCCCHCCCC-C..GG-SICECCITTCGGGCC-CTSTTSB-SS-HHHHHHHHHHHHHHS-CCC CS
  Alpha-amylase 184 lesngeflheftqalnetvasrkevmtvgEvssdasedlrvytte..arlelemvldfphldvaqkakikeqlksisakklkellkkwlkaleeaa 277
                          f  +f +           v+ vgEv++ + ++   y++   +++++ ++l f +  +a++ ++  ++ + ++kk +el++++  +  +  
     EPX72017.1 237 -----TFFPDFVKSSG--------VYAVGEVFDYDPKVICDYMNYdiGVTNYIVRLGFNFSFMAHDKFEPTEGFK-TLKKQMELITTDTCSKAD-L 317
                    .....99999998887........788******999977777664224677777777777666666663333322.355566666665555555.7 PP

                    TTCEEES--TTS--HHHHTTSSTTTTHHHHHHHHHCCCTSSSEEEEETTCCCT----STT CS
  Alpha-amylase 278 eeavtflgnHDqeRilsrlgddsaeaekklklaaillltlrGvpviYyGeEigmtggkdp 337
                     ++ +fl+nHD +R +s++ d++      +  a  + l+++G+p +YyG+E+g+ gg dp
     EPX72017.1 318 GNMLIFLDNHDLPRYASYTDDQA-----IIMSAYSFALLWDGIPSVYYGQEQGFYGGTDP 372
                    8999*******************.....6999999*********************9987 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.25
                    S-SCECCE-CCC--CCCCCCHHHHHHCTT-EEE CS
  Alpha-amylase  37 diadytkidpefGtnedlkeLiskahekgikvi 69 
                    ++++y +++p +   + + +  +++ e++ k+ 
     EPX72017.1 379 WTSNYDQTNPYYTMIKTMVNFRKHVMEQDTKFT 411
                    899999999999988888888888888777764 PP

>> DUF1966  Domain of unknown function (DUF1966)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.47   4.2e+03      40      70 ..     294     324 ..     291     331 .. 0.82
   2 !   33.0   0.0   6.2e-12   5.6e-08       5      87 ..     421     498 ..     417     500 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.47
     DUF1966  40 ssgyaagtevvdvlsCksvtvdssgeltvtm 70 
                 ++g++  ++ +++++  ++   + g++ + +
  EPX72017.1 294 TEGFKTLKKQMELITTDTCSKADLGNMLIFL 324
                 5799999999999999999999999988765 PP

  == domain 2  score: 33.0 bits;  conditional E-value: 6.2e-12
     DUF1966   5 dkstlalrKgpegsqvvtvlsnkGssgssytlslkssgyaagtevvdvlsCksvtvdssgeltvtmekGePrvlvpksklegs 87 
                 d  ++a +K      v+ + +n G +++ +  +++ s+y++++ + dv+  +++tv++ g +t ++++G P vl+p+ kl+  
  EPX72017.1 421 DVDHVAAKKHD----VLLIYNNLGIKSNGTVYKVP-SQYSEKEVISDVFGHRTLTVGQGGTVTASLTSGYPMVLYPHTKLSDF 498
                 55667777776....*******************9.*****************************************998865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (570 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       607  (0.0338558); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 3920.26
//
Query:       EPX72018.1  [L=610]
Description: DNAJC11 family DNAJ domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.1e-30  106.6   2.3    1.1e-30  106.6   2.3    1.7  2  DUF3395      Domain of unknown function (DUF3395)
    2.8e-22   78.6   0.9      6e-22   77.5   0.9    1.6  1  DnaJ         DnaJ domain
  ------ inclusion threshold ------
        1.3    8.5   5.0       0.33   10.5   0.4    1.9  2  Mu-like_Pro  Mu-like prophage I protein


Domain annotation for each model (and alignments):
>> DUF3395  Domain of unknown function (DUF3395)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.4       1.5     9e+03      17      43 ..      92     104 ..      86     118 .. 0.46
   2 !  106.6   2.3   1.8e-34   1.1e-30       1     157 []     462     604 ..     462     604 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 1.5
     DUF3395  17 elaeliaekrkeaeeaqellkeqaerk 43 
                 el++ i+e+               + k
  EPX72018.1  92 ELQQTIREQL--------------QAK 104
                 2222222222..............222 PP

  == domain 2  score: 106.6 bits;  conditional E-value: 1.8e-34
     DUF3395   1 PyerkkkrreleeqreelaeliaekrkeaeeaqellkeqaerkrekEerknGLvIlkAlYGklpakkkklkkkkenreaeeeeeeeakepeviDvtipl 99 
                 P++ ++++r+ + + +++++  ++k++eae+ ++l+ke +++k++ E++k+GLvI+ A+Y  +p+++                ++++++    Dvtip+
  EPX72018.1 462 PRRISESKRRRALRLQQHKKIHETKKEEAEQIVALMKELVQKKQKVEADKGGLVIEYAEYRTIPKNS--------------VLRRQKEHAIKQDVTIPI 546
                 566677888889999***********************************************99998..............667777777888****** PP

     DUF3395 100 qalVkdsqLvlpeglsksnllGFydPcpgeekqLkvrYtfrgklhevtvddeeelalP 157
                 + lV+ds+Lv+p+++sks+++G+y    +++k+L ++Y+f+++ h+v +++++++ lP
  EPX72018.1 547 ASLVDDSRLVIPSSVSKSSIVGIYPLFSDDDKELLIVYKFHQQSHRVLLREKQGVLLP 604
                 *******************************************************998 PP

>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.5   0.9     1e-25     6e-22       2      63 .]       7      70 ..       6      70 .. 0.94

  Alignments for each domain:
  == domain 1  score: 77.5 bits;  conditional E-value: 1e-25
                HHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHH..HHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ  2 yYeiLgvskdasedeIkkaYrklalkyHPDknpkdp..eaeekFkeineAyevLsdpekRkqYD 63
                +Ye+Lg++ da++++Ik aY++l++ +HPD+++ ++   ae+kF+++++AyevLsdp kR++YD
  EPX72018.1  7 LYEVLGLPVDATAEQIKDAYYRLSKLFHPDRHNLEQkvVAEQKFQRVQAAYEVLSDPIKRQIYD 70
                8*****************************985555579************************9 PP

>> Mu-like_Pro  Mu-like prophage I protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.4   5.6e-05      0.33     151     272 ..       4     141 ..       2     148 .. 0.71
   2 ?   -0.6   0.5      0.13   7.7e+02     209     245 ..     480     517 ..     463     541 .. 0.68

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 5.6e-05
  Mu-like_Pro 151 lkkllaaLgleedateeqilaalkalkeekaavaealg..lkagaktaeasaevaaLsaka................vDlakyvpveaaqalqaelaa 230
                   k+l + Lgl++dat+eqi++a  +l++  +  ++ l+  + a++k + ++a+ + Ls  +                vD     + ++a++lq+ + +
   EPX72018.1   4 TKELYEVLGLPVDATAEQIKDAYYRLSKLFHPDRHNLEqkVVAEQKFQRVQAAYEVLS--DpikrqiydkygmkglkVDWDIGPAGQSAEELQQTIRE 99 
                  5899**********************99993333333300223333344444444442..13455666777777777777777779999999999998 PP

  Mu-like_Pro 231 lkakiaekeaealiekAlkeGkltpalkdwaralakkdlaal 272
                    + ++++++++li++  ++  +++a+  +a++l  +++ al
   EPX72018.1 100 QLQAKESQSLDSLIQNRTETNVMINATPLFAKNLRVRNPLAL 141
                  888889999999999988888888888888888877776655 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.13
  Mu-like_Pro 209 a.vDlakyvpveaaqalqaelaalkakiaekeaealie 245
                  + +  +k+ ++e++ al +el++ k+k++  +   +ie
   EPX72018.1 480 KkIHETKKEEAEQIVALMKELVQKKQKVEADKGGLVIE 517
                  13666667777777777777777777776666555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (610 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1291  (0.0720062); expected 358.6 (0.02)
Passed bias filter:                      755  (0.0421105); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.31s 00:00:00.97 Elapsed: 00:00:00.45
# Mc/sec: 4097.38
//
Query:       EPX72019.1  [L=1382]
Description: alpha-1,3-glucan synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.9e-16   59.2   0.1    9.4e-16   58.2   0.1    1.4  1  Glyco_transf_5   Starch synthase catalytic domain
    7.5e-07   28.8   0.0    1.5e-06   27.8   0.0    1.4  1  Glycos_transf_1  Glycosyl transferases group 1
    3.6e-06   27.4   0.0    6.9e-06   26.5   0.0    1.4  1  Glyco_trans_1_4  Glycosyl transferases group 1
     0.0048   16.9   0.0      0.013   15.5   0.0    1.7  1  Glyco_transf_4   Glycosyltransferase Family 4
  ------ inclusion threshold ------
        4.3    7.2   4.9         13    5.6   4.9    1.8  1  MaAIMP_sms       Putative methionine and alanine importer, sm


Domain annotation for each model (and alignments):
>> Glyco_transf_5  Starch synthase catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.2   0.1   2.6e-19   9.4e-16       2     214 ..     261     466 ..     260     471 .. 0.79

  Alignments for each domain:
  == domain 1  score: 58.2 bits;  conditional E-value: 2.6e-19
  Glyco_transf_5   2 ilfvasEv..apl...aktGGLadvvgaLpkaLaklghdvrvilPrygaikeekkeleevaelskaaedevevev.ekvkvaklkkdgvdvyfld 90 
                     ilf++ E+  + +   +k GGL+ +++ +++ L++  +d   ++P  g+i     e+   + +        +v+  ++vkv+ ++ +++++++ld
      EPX72019.1 261 ILFATLEYniPDWnikIKIGGLGVMAQLMSNNLKR--YDLIWVVPCVGDIVYPVAETAPSIIV-------KTVNQqYEVKVYYHYLENIKYVILD 346
                     8999999966344668*****************98..69********8888755222221111.......123324899**************** PP

  Glyco_transf_5  91 npeffdreg..lYgdk.gedyednaerfalfsraalelleklgwkpdvihahDWhtalvpallkelykerglfkkiktvftiHNlayqgrfp... 179
                     +p + ++++  +Y      d    a  ++++++ +++++ +    pd+ h++D+h+al+p++             +++++++HN ++qg +p   
      EPX72019.1 347 CPILRKQTSrdPY--PlRMDDFSSAIFYSIWNQSIAAVMMR--ENPDIYHINDYHCALAPLYNLPKI--------VPCAVSLHNAEFQGLWPlqs 429
                     ***99765569**..33777788899999*****9999999..47****************966655........9****************988 PP

  Glyco_transf_5 180 ....kdelaalglpaedfekldglefygkvnflkagivy 214
                         +d+   +++p++ +  ++ ++f +++n+++a+  y
      EPX72019.1 430 endlRDVCGLFNIPKSVC--KSYVQFGNAFNLMHAAASY 466
                     544333334477776555..5778899999999998776 PP

>> Glycos_transf_1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.0   4.3e-10   1.5e-06      12     130 ..     548     667 ..     539     672 .. 0.89

  Alignments for each domain:
  == domain 1  score: 27.8 bits;  conditional E-value: 4.3e-10
                      TTT-EEEEEESS-TTTTTHHHHHHHHHCCCCCHCSCEEEEEES......STTHHHHHHHHHHHCTTCGGGEEECCHSSSHHHHHHC.ESEEEEE CS
  Glycos_transf_1  12 nekkkiilsvgrlekeKgvdllikafallkkqlnpnvklviaG.....ngeeekelkklaeelelsdnviflgevsredleellkn.adifvlp 99 
                      +++  ++++vgr + +Kg+dl+ +++++l ++   n++++++G     +g+  +e  + + e+  +       +v    l++++   ad +++p
       EPX72019.1 548 DDTADLLVFVGRWSVQKGIDLIADLAPTLLDK--FNTQIIVVGpvidlHGKFAAEKFAYIMERYPGRVFSRPEFVH---LPSFIFDgADFALIP 636
                      6778899**********************975..9***********999999999999999999988888888887...66665555******* PP

                      ESSBSS-HHHHHHHHTT--EEEETTTTHCHH CS
  Glycos_transf_1 100 sisEgfGivllEAmaaglpviasnaggpaev 130
                      s+ E+fG+v++E    g ++i   +gg+ e+
       EPX72019.1 637 SRDEPFGLVAVEFGRRGAICIGARVGGLGEM 667
                      **************************99875 PP

>> Glyco_trans_1_4  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.0   1.9e-09   6.9e-06       3     109 ..     553     668 ..     551     695 .. 0.73

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 1.9e-09
                      EEEEES---GG.GTHHHHHHHHHHHH.H.HEEEEEES.....---...HHHHHHHT.T-T.T.EEEE---THHHHH.HHH-SEEEE--..---S CS
  Glyco_trans_1_4   3 vilfvGrleenvkgvdllleavpllrkk.dvrlvivG.....dgp.rpeeleelaa.gleer.veftGfvedlael.laaadvfvaPs..egfg 84 
                       ++fvGr    +kg+dl+++ +p l++k + ++++vG      g+  +e++  ++  ++  r ++   fv  l+++ ++ ad +++Ps  e fg
       EPX72019.1 553 LLVFVGRW-SVQKGIDLIADLAPTLLDKfNTQIIVVGpvidlHGKfAAEKFA-YIMeRYPGRvFSRPEFV-HLPSFiFDGADFALIPSrdEPFG 643
                      69******.566**************9988*******333222333223443.22123323335555566.5666559**********999*** PP

                      HHHHHHHHTT-EEEE-TGGGTTT-- CS
  Glyco_trans_1_4  85 lkllEamaaglpvVatdvggiaevv 109
                      l+++E    g  ++  +vgg+ e+ 
       EPX72019.1 644 LVAVEFGRRGAICIGARVGGLGEMP 668
                      *******************998854 PP

>> Glyco_transf_4  Glycosyltransferase Family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   3.7e-06     0.013      62     113 ..     377     426 ..     325     437 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 3.7e-06
  Glyco_transf_4  62 rrlrrllkrekpDvvHahspaalgaallalrrrlgiplVltvHglyekrllk 113
                     +++++++ re+pD+ H++++++++a l  l   + +p+ +++H+ + ++l++
      EPX72019.1 377 QSIAAVMMRENPDIYHINDYHCALAPLYNLP--KIVPCAVSLHNAEFQGLWP 426
                     367889999**********************..5**********99644443 PP

>> MaAIMP_sms  Putative methionine and alanine importer, small subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   4.9    0.0036        13       5      21 ..    1206    1222 ..    1204    1229 .. 0.87

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0036
  MaAIMP_sms    5 AiimmvLFiviiWGGLv 21  
                   i+mm+ F+v +W GL 
  EPX72019.1 1206 VIVMMICFLVFLWVGLL 1222
                  59*************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1382 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       626  (0.0349155); expected 358.6 (0.02)
Passed bias filter:                      347  (0.0193541); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.84u 0.29s 00:00:01.12 Elapsed: 00:00:00.47
# Mc/sec: 8778.61
//
Query:       EPX72020.1  [L=322]
Description: TAP42 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-72  243.9  13.0    2.8e-72  243.5  13.0    1.1  1  TAP42     TAP42-like family
  ------ inclusion threshold ------
       0.35    9.7   2.5        0.5    9.2   2.5    1.2  1  LMBR1     LMBR1-like membrane protein


Domain annotation for each model (and alignments):
>> TAP42  TAP42-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  243.5  13.0   3.2e-76   2.8e-72      18     319 .]      13     311 ..       3     311 .. 0.91

  Alignments for each domain:
  == domain 1  score: 243.5 bits;  conditional E-value: 3.2e-76
                 C-S.-TTSHHHHHHHHHHHHHHHHHHHHHHHHTTT-SSS-CCCS-TTTGGGGGHHHHHHHHHCT---..GGGHHHHHHHHHHHHHHHHCCHHHTTS... CS
       TAP42  18 ssa.psnseeyqekvkkaiaalekaaklvsqlslFSsNEsledistsdLkyLlvpyylaeltqkiqssdpeeRlevLkrakeyyeeFlkrlesyellse 115
                 +++ ++++   qe+v ++++ +e++  lv++  lFS NE++++++ts+L+yLl+++ +a+++++ ++   ++Rl+v++ +k++ye+Fl+ +e y+l   
  EPX72020.1  13 TNHlKETKGISQETVPQLVKGYESCLGLVRRARLFSLNEDIDEVKTSELRYLLLDFEVAKCMEQWMQ---NDRLKVIEYSKTCYENFLRICEGYGL--- 105
                 22236667789********************************************************...**************************... PP

                 .................S-----SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-S-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC...--X CS
       TAP42 116 eekklleeleeeekyseseeefsdaaarReeKIarfkeeKeleekleelkkrveseeeDeeevRelylaqlklavlkafqelesieqEleiLeaapkee 214
                    k l    +        ++f+++++ R +KIar+k +K++e+++  + k+     +Dee +R+++++++++a+  +++ +++ie+E++iL++++k+ 
  EPX72020.1 106 ---KPL----P-------ISSFTKDTDARSTKIARYKLRKDIENEIGSMTKEHI---QDEELERKVWINKIQMAIEDTVDDMRHIEMEIQILKSLEKQA 187
                 ...222....1.......1234556799*********************99555...59*************************************988 PP

                 XXXX.......................XXXXXXX..XXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TAP42 215 eqee.......................skakkgpllskqgkplrPftilstReelqkkVfgpghslPtMtvdEyleeevrrGniiegggeasakeeeee 290
                  ++                        ++ +k++ll+++ +p++Pfti+s+R++  k+Vfgpg++lPtM+vdEyl+ee +rGnii+++++++++   e 
  EPX72020.1 188 HEKDisqsqetlrkeeqrnqdrntwklDSLTKESLLDPKNRPIQPFTIVSDRNAKSKNVFGPGYNLPTMSVDEYLDEEAKRGNIISQKDNQNQQGSSE- 285
                 8777***********************88999********************************************************9888887776. PP

                 X.XXXX....XXXXXXXXXXXXXXXXXXX CS
       TAP42 291 edeeedeekadeeetqkarawDefkddnp 319
                   +e+d++ ad ++t+kar wDe++++np
  EPX72020.1 286 --DEDDNDIAD-AKTMKARYWDEYTEANP 311
                 ..677778999.****************8 PP

>> LMBR1  LMBR1-like membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   2.5   5.6e-05       0.5     177     320 ..      99     284 ..      95     309 .. 0.47

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 5.6e-05
       LMBR1 177 lllGyGlvelPrslwr.............eiksdldeelkklyfeaaklntekeeaereledllkevkklrksisesdplrkyleeilkkvPeeiaekl 262
                 ++ GyGl  lP+s +              ++++d+++e+ ++     k + ++ee er++      ++k++  i+++    +++e+ ++          
  EPX72020.1  99 ICEGYGLKPLPISSFTkdtdarstkiaryKLRKDIENEIGSM----TKEHIQDEELERKVW-----INKIQMAIEDTVDDMRHIEMEIQ---------- 178
                 899***********9944444444444443333333333333....333333333333333.....33333333333322222222222.......... PP

       LMBR1 263 ksnenkteeslak.lekqlikalqkrertekqwkrllekalele......................................................d 306
                        ++sl k  +++ i+++q++ r+e+q ++  +   +l                                                       +
  EPX72020.1 179 ------ILKSLEKqAHEKDISQSQETLRKEEQRNQDRNTW-KLDsltkeslldpknrpiqpftivsdrnaksknvfgpgynlptmsvdeyldeeakrgN 270
                 ......2222222023333333444444444433332222.2222233333345566666666666666666666666666666666666666666666 PP

       LMBR1 307 iiknksskekefks 320
                 ii++k++++++ +s
  EPX72020.1 271 IISQKDNQNQQGSS 284
                 66666666655554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1900  (0.105974); expected 358.6 (0.02)
Passed bias filter:                      539  (0.030063); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.30s 00:00:00.81 Elapsed: 00:00:00.46
# Mc/sec: 2100.61
//
Query:       EPX72021.1  [L=331]
Description: WDR89 family WD repeat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      3e-07   31.0   5.8      0.017   15.9   0.1    4.3  4  WD40           WD domain, G-beta repeat
     0.0014   18.9   0.2      0.026   14.8   0.1    2.9  3  ANAPC4_WD40    Anaphase-promoting complex subunit 4 WD40 doma
  ------ inclusion threshold ------
      0.085   11.6   0.0       0.13   11.0   0.0    1.3  1  Nucleoporin_N  Nup133 N terminal like


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.1      0.23   1.3e+03      18      33 ..      31      44 ..       7      46 .. 0.66
   2 !   13.6   0.2   1.6e-05     0.094       5      38 .]      50      83 ..      46      83 .. 0.71
   3 ?    0.4   0.0      0.24   1.4e+03       5      38 .]      93     142 ..      89     142 .. 0.54
   4 !   15.9   0.1   2.9e-06     0.017       8      36 ..     143     173 ..     132     175 .. 0.76

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.23
                EETTSSEEEEEETTSE CS
        WD40 18 fspdgawlasGsdDgt 33
                 +++g+w  ++ d+ t
  EPX72021.1 31 SCSNGTW--ACYDKTT 44
                6778888..4785555 PP

  == domain 2  score: 13.6 bits;  conditional E-value: 1.6e-05
                EEEESSSSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  5 rtltGHssvtslafspdgawlasGsdDgtvriWd 38
                ++  +Hs++t++ +   ++ +++++ Dg++++Wd
  EPX72021.1 50 KVPNAHSNITGIINYEKHNGVLTCGTDGKLHLWD 83
                56679988999984444444556666*******9 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.24
                 EEEESS.SSEEEEEEETTSSEEEEEET................TSEEEEEE CS
        WD40   5 rtltGH.ssvtslafspdgawlasGsd................DgtvriWd 38 
                 rt+t +  + t+la ++  +  a+Gs+                 + +r W+
  EPX72021.1  93 RTWTSQsVPLTCLAANQTEQI-AAGSEltrslasiflldarneQKIIRQWN 142
                 566666333588876666666.55764444444444444555566666665 PP

  == domain 4  score: 15.9 bits;  conditional E-value: 2.9e-06
                 ESS.SSEEEEEEETTSSEE.EEEETTSEEEE CS
        WD40   8 tGH.ssvtslafspdgawl.asGsdDgtvri 36 
                 ++H +++tsl+f+p  + l ++Gs Dg v +
  EPX72021.1 143 DAHnDDITSLQFHPKDNNLlLTGSVDGLVNL 173
                 48*666*****8888888626******9976 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.25   1.5e+03      36      68 ..      53      85 ..      25     106 .. 0.55
   2 !   14.8   0.1   4.4e-06     0.026      25      76 ..     133     185 ..     127     198 .. 0.84
   3 ?   -0.9   0.0      0.34     2e+03       9      32 ..     190     214 ..     182     237 .. 0.71

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.25
  ANAPC4_WD40 36 kedsevrs.LaWkpdgklLavaysdgevrlldae 68
                 +  s++++ +++++ + +L  +  dg+++l d+ 
   EPX72021.1 53 NAHSNITGiINYEKHNGVLTCG-TDGKLHLWDIR 85
                 3344444312344444444443.35666666655 PP

  == domain 2  score: 14.8 bits;  conditional E-value: 4.4e-06
  ANAPC4_WD40  25 ngqrvwtleedkedsevrsLaWkpdg.klLavaysdgevrlldaesgkvvhsl 76 
                  n q++    +d+++  ++sL+++p++ +lL  +  dg v+l+d+ + +  +++
   EPX72021.1 133 NEQKIIRQWNDAHNDDITSLQFHPKDnNLLLTGSVDGLVNLVDITKDEDTENI 185
                  7899999999*************96527899999**********998876666 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.34
  ANAPC4_WD40   9 LiAlatedgellvfRlngq.rvwtl 32 
                  L+ ++++d +++v R+ g+ rv  l
   EPX72021.1 190 LLHVINHDASIHVARFLGKrRVLAL 214
                  6777888889999998664145544 PP

>> Nucleoporin_N  Nup133 N terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   2.1e-05      0.13     127     234 ..      48     180 ..      32     203 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 2.1e-05
                    E--EETT.TTEEEEEEETTTC-EEEEETTSSEEEEEEC-SSS-CEEEEEE.....EEE-SSSS-......--SSS--G................-- CS
  Nucleoporin_N 127 dlsvssdgeivtqvinseptgriflagstgrlyeltyrdssgwpslkckk.....icltkgglssll...silpgvls................ga 198
                    +++v++   ++t +in+e+ + ++ +g++g+l+  ++r+s ++p+ + +       cl  +    +     +++++ s                + 
     EPX72021.1  48 SFKVPNAHSNITGIINYEKHNGVLTCGTDGKLHLWDIRNSPSKPARTWTSqsvplTCLAANQTEQIAagsELTRSLASiflldarneqkiirqwND 143
                    5778888899**********99********999999999988866555541111133333322211133322222222444777777777777666 PP

                    --GG-EEEEEEECCT.CEEEEEETTSEEEEEEEETTC CS
  Nucleoporin_N 199 sereeivqlridssr.rilytlsskgvirvydlsasn 234
                      +++i++l  +++  ++l t s +g ++  d+++++
     EPX72021.1 144 AHNDDITSLQFHPKDnNLLLTGSVDGLVNLVDITKDE 180
                    7777777777777777777777777777766666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       574  (0.0320152); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.29s 00:00:00.78 Elapsed: 00:00:00.45
# Mc/sec: 2227.65
//
Query:       EPX72022.1  [L=262]
Description: tRNA guanylyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-52  176.1   0.1      4e-52  175.5   0.1    1.3  1  Thg1      tRNAHis guanylyltransferase
      1e-44  151.6   1.3    1.5e-44  151.0   1.3    1.3  1  Thg1C     Thg1 C terminal domain


Domain annotation for each model (and alignments):
>> Thg1  tRNAHis guanylyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.5   0.1   4.5e-56     4e-52       1     125 []       6     134 ..       6     134 .. 0.96

  Alignments for each domain:
  == domain 1  score: 175.5 bits;  conditional E-value: 4.5e-56
        Thg1   1 yeyvkefeqddkllpntlivvRiDGrgFhkfskkhkfekPnDeralklmneaakelvkefedivlaYgqSDEislvlsketklynrraqklvslvaslf 99 
                 +eyvk++e  d+llp+t+iv+RiDG+gFhkf+kkh+fekPnD r+l+lmn+aa+ +++ef+divlaYg SDE+s++ sk+t+ly+rr++klvs v+slf
  EPX72022.1   6 FEYVKQYERIDRLLPETYIVIRIDGKGFHKFTKKHEFEKPNDLRCLSLMNAAARVVMSEFTDIVLAYGDSDEYSFIWSKSTELYERRENKLVSHVCSLF 104
                 69************************************************************************************************* PP

        Thg1 100 taafvkllskafe....elpsFDarvvlyp 125
                 t+afv++++++f+    +lpsFD+r+vlyp
  EPX72022.1 105 TSAFVFNWPRYFDmpllSLPSFDGRAVLYP 134
                 ************5533345**********8 PP

>> Thg1C  Thg1 C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.0   1.3   1.7e-48   1.5e-44       2     110 ..     138     235 ..     137     247 .. 0.82

  Alignments for each domain:
  == domain 1  score: 151.0 bits;  conditional E-value: 1.7e-48
       Thg1C   2 nlrDYlsWRqvDchinnlYNttFWalvqkgglteqeaeeeLkgtlskdkneiLfsefginYnnepeifrkGsvlvrekekeekkekeeekeekelskeq 100
                  lrDYl+WRqvDchinnlYNttFWal+qkgglt+++aee Lkgt+s++k+eiLfs+f+inYnne ei++kGs+ vre e++e++ +++           
  EPX72022.1 138 VLRDYLNWRQVDCHINNLYNTTFWALIQKGGLTNTKAEEYLKGTVSSQKHEILFSQFHINYNNELEIYKKGSIWVREPEENESAPSKH----------- 225
                 59**************************************************************************876654332222........... PP

       Thg1C 101 eekekkekkk 110
                 e+ ++k+k+k
  EPX72022.1 226 EKYSTKQKRK 235
                 2222222333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (262 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       649  (0.0361983); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 1949.07
//
Query:       EPX72023.1  [L=832]
Description: ULK/ULK protein kinase Atg1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.9e-58  197.9   0.0    3.6e-58  197.0   0.0    1.4  1  Pkinase         Protein kinase domain
    6.8e-42  143.6   3.2    1.1e-41  142.9   3.2    1.3  1  DUF3543         Domain of unknown function (DUF3543)
    8.6e-42  143.2   0.0    1.3e-41  142.7   0.0    1.2  1  Pkinase_Tyr     Protein tyrosine kinase
  ------ inclusion threshold ------
      0.029   13.1   0.0      0.057   12.2   0.0    1.4  1  Pkinase_fungal  Fungal protein kinase
      0.032   14.1   0.0      0.063   13.2   0.0    1.4  1  APH             Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  197.0   0.0     1e-61   3.6e-58       1     260 [.      14     303 ..      14     307 .. 0.88

  Alignments for each domain:
  == domain 1  score: 197.0 bits;  conditional E-value: 1e-61
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HH. CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslsee. 98 
                 y+  +++G+Gsf+ Vyk++++et++ v +K + ++k +kk  +++ +Ei+ilk+++h ++v+l+++++  + ++l++ey++ g+l  +++++ ++s+  
  EPX72023.1  14 YVIRSEIGRGSFAIVYKGKHSETKRVVSIKSVLTKKLTKKLLENLESEISILKEIRHVHVVELIDCIKLGRFIHLIMEYCSLGDLSYFIRKREKFSSIp 112
                 567789*********************************999************************************************777777777 PP

                 ....................HHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEET..........TTE.........EEE-SGTTSEESSSSCSBCTTT CS
     Pkinase  99 ....................eakkiakqilegleylHskgiiHrDlKpeNiLide..........kge.........lKitDFGlakelessskltsfv 158
                                      +++++kq++++l++l s+++iHrD+Kp+N+L++             +         lK++DFG+a+ l++ss +++ +
  EPX72023.1 113 slawinvdhppvykaglnetLVRHFMKQLASALQFLRSRSLIHRDVKPQNLLLQPppteafleehP-QfigspklpmLKLADFGFARYLQTSSMAETLC 210
                 778888888888888888779*********************************657777776650.1555566778********************** PP

                 SCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHH CS
     Pkinase 159 gtseYlAPEvlkeneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaee 257
                 g++ Y+APE+l++++y++k+D+Ws+G +lye+  gkppf++ ++ e     l+++++  ++       +pe+  i +++k l+ +llk++p +R+  ++
  EPX72023.1 211 GSPLYMAPEILRYEKYDAKADLWSVGAVLYEMAVGKPPFKAPNHVE----LLRRIQRAKDV-----IRFPEEAFIHSDIKALICSLLKQNPADRIDYDQ 300
                 ****************************************655555....44443444444.....57899999********************99888 PP

                 HHT CS
     Pkinase 258 llq 260
                   +
  EPX72023.1 301 FFA 303
                 765 PP

>> DUF3543  Domain of unknown function (DUF3543)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.9   3.2     3e-45   1.1e-41       4     251 .]     593     807 ..     590     807 .. 0.91

  Alignments for each domain:
  == domain 1  score: 142.9 bits;  conditional E-value: 3e-45
     DUF3543   4 dtklletleelaakadvvyefAevKfkqliPlapsskeglgaeeaksesnsssaiedeeltpeaivslseealvLYvkalsllakamdiaskwWkkkna 102
                 +++l+e+le+laaka++v+++AevK+ q++P+         ++     +++ ++ +d +lt +++vsl +e+l+LY + ++ll+ a++ +s+  ++k  
  EPX72023.1 593 HKTLMEVLEDLAAKANAVFHMAEVKLVQVLPSLE-------ID-----DAQYDTLKDARLTSASLVSLVKESLTLYQRDIELLQIAFNFVSTGLSNKD- 678
                 57899**************************222.......22.....2456788999***********************************77765. PP

     DUF3543 103 kkgekvvslrlnevvqwirerFnevleKaefvrlklqeaqkqlpedhpesaessseevslsegvtaekLiYDrAlemSraAAvnEltgedlkgCelaYe 201
                     ++ ++++ e+++w ++r+ e+leK+ef++  +++ +              ++++ ++++ +a +LiY+rAl++Sr+AA++El+g+d+ ++  +Y+
  EPX72023.1 679 ----EKNTSECREALEWYQKRYMESLEKSEFLKAVVNSYS-------------FANTLRITKPAFASQLIYQRALDISRNAATSELSGNDVFSSFKSYK 760
                 ....666789***************************888.............456899**************************************** PP

     DUF3543 202 taiwmLealldedeeeenkkeeeldeeDrkviekliksiknRLkalrkkl 251
                  a  +Le+ll+ + ++ ++   + d ++  +i+kli+ i++RL+ l+ kl
  EPX72023.1 761 VANNLLESLLEGEFSTPSG---TEDFNNTFTIQKLITLISKRLDLLQGKL 807
                 ************9999875...779999******************9886 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.7   0.0   3.5e-45   1.3e-41       3     255 ..      16     301 ..      14     305 .. 0.90

  Alignments for each domain:
  == domain 1  score: 142.7 bits;  conditional E-value: 3.5e-45
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEE.STTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHT.... CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtl.keeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkk.... 95 
                  + +++G+G+f+ V++g+ +    +++  V +K++ +++ t++  e+l +e++i+k+++h ++v+l+ ++  ++ + +++ey++ GdL+ f+rk+    
   EPX72023.1  16 IRSEIGRGSFAIVYKGKHS----ETKRVVSIKSVlTKKLTKKLLENLESEISILKEIRHVHVVELIDCIKLGRFIHLIMEYCSLGDLSYFIRKRekfs 109
                  5689************999....89999****985777888889****************************************************** PP

                  ...............CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE..................TTEEEE-STTTHEETTTSSEEE CS
  Pkinase_Tyr  96 ...............ekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse..................nkvvkisDfGLardiekddeyv 160
                                  k+ l+ + + +f+ q+A+++++L s++l+Hrd+  +N Ll+                     + k++DfG ar +   ++ +
   EPX72023.1 110 sipslawinvdhppvYKAGLNETLVRHFMKQLASALQFLRSRSLIHRDVKPQNLLLQPppteafleehpqfigspkLPMLKLADFGFARYL---QTSS 204
                  **************9999999999*********************************99999***********987779************...4444 PP

                  ETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHHHTTE...ES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHH CS
  Pkinase_Tyr 161 kkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglkneevleklkegk...rlekpekcpeelyelmkkcweedpeeRptfsel 255
                  ++e+   +  +mapE+l+++k+  k+D Ws G +l+E++  g+ p++  ++ e+l+++++ k   r ++ + ++++++ l+ + ++++p++R ++ + 
   EPX72023.1 205 MAETLCGSPLYMAPEILRYEKYDAKADLWSVGAVLYEMAV-GKPPFKAPNHVELLRRIQRAKdviRFPEEAFIHSDIKALICSLLKQNPADRIDYDQF 301
                  4555555667***************************998.*******99999999995544112566677789******************998775 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   1.6e-05     0.057     314     400 ..     143     235 ..     122     242 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.6e-05
  Pkinase_fungal 314 DaIkghrsLflkagiLHrDiSenNilitdskke.............gerkglLiDLDlakelsddssesgarertGTleFmaievlkgeeHsyrh 395
                      a++     ++   ++HrD+  +N+l+  + +e             + +   L+D+ +a  l++   +s a++  G + +ma e+l+ e+     
      EPX72023.1 143 SALQ----FLRSRSLIHRDVKPQNLLLQPPPTEafleehpqfigspKLPMLKLADFGFARYLQT---SSMAETLCGSPLYMAPEILRYEKYDAKA 230
                     3333....3336779*************665555777777789888889999**********96...4445679*************98898888 PP

  Pkinase_fungal 396 DLESf 400
                     DL S+
      EPX72023.1 231 DLWSV 235
                     88765 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.7e-05     0.063     144     184 ..     129     167 ..      96     174 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.7e-05
                 HHHHHHHHHHHHHHHH--SSS-EEEE-SS-SGGGEEEC..T CS
         APH 144 lleeleeqvlaalaallpgelptvllHgDlhpgNllvdpdd 184
                 l e l + ++ +la  l+   +++l+H+D +p+Nll++  +
  EPX72023.1 129 LNETLVRHFMKQLASALQFLRSRSLIHRDVKPQNLLLQ--P 167
                 45566677888899999999****************99..3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (832 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       799  (0.0445647); expected 358.6 (0.02)
Passed bias filter:                      551  (0.0307323); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.72u 0.31s 00:00:01.03 Elapsed: 00:00:00.46
# Mc/sec: 5435.22
//
Query:       EPX72024.1  [L=483]
Description: dolichol kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (483 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       742  (0.0413855); expected 358.6 (0.02)
Passed bias filter:                      315  (0.0175693); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.29s 00:00:00.83 Elapsed: 00:00:00.46
# Mc/sec: 3174.55
//
Query:       EPX72025.1  [L=204]
Description: 20S proteasome component beta 3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.8e-43  146.4   0.0    7.7e-43  146.2   0.0    1.0  1  Proteasome   Proteasome subunit
  ------ inclusion threshold ------
       0.12   12.5   0.1       0.64   10.2   0.0    1.9  2  Trans_coact  Phage late-transcription coactivator


Domain annotation for each model (and alignments):
>> Proteasome  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  146.2   0.0   8.6e-47   7.7e-43       3     190 .]       7     189 ..       5     189 .. 0.98

  Alignments for each domain:
  == domain 1  score: 146.2 bits;  conditional E-value: 8.6e-47
                 HS-EEEEEEETTEEEEEEEEEEEETTEEEESSSSTSEEEEETTEEEEEEESHHHHHHHHHHHHHHHHHHHHHHSSGTCHHHHHHHHHHHHHHHHHHCTT CS
  Proteasome   3 kGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigvafaGlaaDartlvrraraeaqlyrlrygrpipverlvarvaaklqaytqrsgr 101
                 +G+++v+++gk++v++a+d r+  +s+ l+++ + K+f ++d+++++++G a+D++tl + +r+++++y++r++r+i ++     +a++++  ++++++
  EPX72025.1   7 NGGSCVAMTGKNCVAIASDLRLGVQSISLANN-FPKVFPMTDKTYLGLTGFASDVQTLYELFRYKVNMYKFREERQIEPK----TFANLVSTSLYEKRF 100
                 8**********************999998888.9**********************************************....*************** PP

                 TTTSEEEEEEEEETTTEEEEEEEETTSEEEEESSEEEESTTHHHHHHHHHHHHSTTBSHHHHHHHHHHHHHHHHHHBTTSCSSEEEEEE CS
  Proteasome 102 rpfgvslliagvdeeggpeLyqidpsGsyieekdavaiGsgseaaktalekeykedltleeavelavkalkealerdklsgknievavi 190
                 +p+    ++ag+ +++ p+++ +d +G++   +d+++ G+++e  ++++e+ y+++l+ e+++e++ +al +a +rd++sg+++ v++i
  EPX72025.1 101 GPYFSFPVVAGLAKDDNPFICGFDSIGCIDFADDFIVSGTAAEQLYGMCESVYEPNLEPEDLFETISQALLNAQDRDAISGWGCIVYII 189
                 ******************************999*****************************************************997 PP

>> Trans_coact  Phage late-transcription coactivator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   7.1e-05      0.64      24      48 ..      74      98 ..      72      98 .. 0.93
   2 ?   -0.4   0.0      0.14   1.3e+03      29      53 ..     154     178 ..     142     180 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 7.1e-05
  Trans_coact 24 lewceendieeeqvpklIskpLkeK 48
                  ++ ee++ie+++++ l+s++L eK
   EPX72025.1 74 YKFREERQIEPKTFANLVSTSLYEK 98
                 5789******************998 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.14
  Trans_coact  29 endieeeqvpklIskpLkeKikaEA 53 
                  e ++e+e+   +Is++L      +A
   EPX72025.1 154 EPNLEPEDLFETISQALLNAQDRDA 178
                  6789999999999999987665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       386  (0.0215294); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1507.51
//
Query:       EPX72026.1  [L=245]
Description: DNAJ domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-21   76.7   0.3    2.2e-21   75.8   0.3    1.5  1  DnaJ             DnaJ domain
  ------ inclusion threshold ------
      0.014   15.6   0.1       0.02   15.2   0.1    1.1  1  DUF456           Protein of unknown function (DUF456)
      0.073   13.0   0.0       0.19   11.7   0.0    1.8  1  SAYSvFN          Uncharacterized conserved domain (SAYSvFN)
       0.52   10.1   6.1        1.5    8.6   5.9    1.7  2  Gly-zipper_YMGG  YMGG-like Gly-zipper
       0.54   10.4   5.3        1.2    9.3   5.3    1.5  1  Bacteriocin_IIc  Bacteriocin class II with double-glycine lea
          2    8.3   7.7        4.4    7.2   7.2    1.7  2  Gly-zipper_OmpA  Glycine-zipper domain
        4.6    7.3   7.4         11    6.1   7.4    1.6  1  Gly-zipper_Omp   Glycine zipper


Domain annotation for each model (and alignments):
>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.8   0.3   8.5e-25   2.2e-21       1      63 []      31      95 ..      31      95 .. 0.94

  Alignments for each domain:
  == domain 1  score: 75.8 bits;  conditional E-value: 8.5e-25
                HHHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHH..HHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ  1 dyYeiLgvskdasedeIkkaYrklalkyHPDknpkdp..eaeekFkeineAyevLsdpekRkqYD 63
                dyY+iL+vsk+a+++eI+ aY++ al+ HPD+ + ++  ea+++F+ +neA+ vL dp++R+qYD
  EPX72026.1 31 DYYSILNVSKKATQEEIRFAYKRAALETHPDRVSPNErtEATQRFQLVNEAFYVLGDPTRRSQYD 95
                8******************************77554447*************************9 PP

>> DUF456  Protein of unknown function (DUF456)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.1   7.8e-06      0.02      62     102 ..     168     206 ..     165     230 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 7.8e-06
      DUF456  62 rgligaivGaivGffllpplGlllgpflgaflgEllrarkd 102
                 +++ig+++Ga +Gf+ +  +G+llg f ga lg  +r + +
  EPX72026.1 168 WTAIGGLAGAALGFIAFDTPGALLGSFSGANLGR-IRDK-H 206
                 8899999999999988889***********9998.6655.4 PP

>> SAYSvFN  Uncharacterized conserved domain (SAYSvFN)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   7.4e-05      0.19      32      50 ..     197     214 ..     166     216 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 7.4e-05
     SAYSvFN  32 tnlrsge.rkegelSAYSVF 50 
                 +nl  g+ r+++ +SAYSVF
  EPX72026.1 197 ANL--GRiRDKHGKSAYSVF 214
                 566..4459*********** PP

>> Gly-zipper_YMGG  YMGG-like Gly-zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   3.1    0.0022       5.6      29      42 ..     169     182 ..     148     186 .. 0.68
   2 ?    8.6   5.9   0.00058       1.5       7      40 ..     169     200 ..     165     206 .. 0.88

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0022
                      XXXXXXXXXXXXXX CS
  Gly-zipper_YMGG  29 AaiGAaaGalaGga 42 
                      +aiG+ aGa+ G +
       EPX72026.1 169 TAIGGLAGAALGFI 182
                      56666666666654 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00058
                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Gly-zipper_YMGG   7 AaiGAaaGAvvGaliGsgggkGAaiGAaaGalaG 40 
                      +aiG+ aGA++G ++      GA+ G   Ga  G
       EPX72026.1 169 TAIGGLAGAALGFIAF--DTPGALLGSFSGANLG 200
                      89*************9..779*****99999877 PP

>> Bacteriocin_IIc  Bacteriocin class II with double-glycine leader peptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   5.3   0.00046       1.2      29      62 .]     170     199 ..     165     199 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00046
  Bacteriocin_IIc  29 vggalaGaatGaatlgilgaavGavvGavvGail 62 
                      + g+laGaa G++    +  ++Ga++G ++Ga+l
       EPX72026.1 170 AIGGLAGAALGFI----AFDTPGALLGSFSGANL 199
                      6688999999999....**************975 PP

>> Gly-zipper_OmpA  Glycine-zipper domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   7.2    0.0017       4.4       8      43 ..     169     203 ..     168     204 .. 0.87
   2 ?    4.8   0.1    0.0097        25       7      24 ..     188     205 ..     183     210 .. 0.80

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0017
  Gly-zipper_OmpA   8 AalGAaaGAavGaitGsaGtGAaiGAasGavaGllr 43 
                      +a+G +aGAa+G i+     GA  G  sGa  G +r
       EPX72026.1 169 TAIGGLAGAALGFIA-FDTPGALLGSFSGANLGRIR 203
                      79**********996.5678*********9999776 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.0097
  Gly-zipper_OmpA   7 GAalGAaaGAavGaitGs 24 
                      GA lG+ +GA +G i+ +
       EPX72026.1 188 GALLGSFSGANLGRIRDK 205
                      999999999998877655 PP

>> Gly-zipper_Omp  Glycine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   7.4    0.0043        11       4      35 ..     170     200 ..     169     210 .. 0.78

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0043
  Gly-zipper_Omp   4 aiGAaaGaliGgavggrgtGaliGAavGaavG 35 
                     aiG++aGa++G ++ ++  Gal G   Ga +G
      EPX72026.1 170 AIGGLAGAALGFIAFDT-PGALLGSFSGANLG 200
                     79999******999864.77777777776666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       753  (0.041999); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 1844.14
//
Query:       EPX72027.1  [L=1065]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.4e-12   45.8  12.1    6.4e-12   45.8  12.1    2.5  1  Eisosome1  Eisosome protein 1
  ------ inclusion threshold ------
        5.4    7.2   7.0         50    4.1   3.0    2.7  2  DUF3474    Domain of unknown function (DUF3474)


Domain annotation for each model (and alignments):
>> Eisosome1  Eisosome protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.8  12.1   7.1e-16   6.4e-12      36     125 .]     582     670 ..     573     670 .. 0.90

  Alignments for each domain:
  == domain 1  score: 45.8 bits;  conditional E-value: 7.1e-16
   Eisosome1  36 eewerkakaaaqaradkrseneagkvdiGggkfmdqeevdaiAarrvqPvLdeInekaekeRerdaelkleeeekkreaeeekarerekk 125
                 ++ e+  k++ +a  d ++e+ +  +d+G g+++++ee++aiA+r+v+P+++e+ e+a++e +r+++    +++kk+++ee+k+r+r++k
  EPX72027.1 582 ADVEALQKRLSRAYIDHEREE-TYAIDLGAGRLISPEELEAIARRNVDPMVSELAERAAAENQRKQQASDSKAAKKQAKEEKKQRKRDEK 670
                 566777777788888888888.9***************************************************************9876 PP

>> DUF3474  Domain of unknown function (DUF3474)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.1    0.0061        55      26      83 ..     397     456 ..     370     468 .. 0.65
   2 ?    4.1   3.0    0.0055        50      33      95 ..     672     735 ..     632     750 .. 0.63

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.0061
     DUF3474  26 asklrflksnkstadlklre..vvsvslsrernWalkvsaPlkvasveeeekeseelngv 83 
                 ++++  l++++s++   +r+    s+  +r+r+W  ++  P++ ++++++ +++ + ++ 
  EPX72027.1 397 SAASAALRRHRSMNANTSRNdnFESQEDARTRDWIRQMRLPTRSTIATNDYRQEPSYSNN 456
                 33334444444433333333336678899**************99998666555444333 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.0055
     DUF3474  33 ksnkstadlklrevvsvslsrernWalkvs.aPlkvasveeeekeseelngveeeeeefDpgaP 95 
                 ++++++   k r++++ ++s++   + +v+ aP++ +  e   ++ e+ +g+e+++++fDp+a 
  EPX72027.1 672 RKAEEKRLAKERAKFAKQMSKDAGRTDEVAaAPITDHEQETSTSSAESYDGQEQGDQSFDPAAQ 735
                 11222333344446666666666666666526888777777778888899999********995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1065 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2483  (0.138491); expected 358.6 (0.02)
Passed bias filter:                      772  (0.0430587); expected 358.6 (0.02)
Passed Vit filter:                       160  (0.00892409); expected 17.9 (0.001)
Passed Fwd filter:                        33  (0.00184059); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.25u 0.32s 00:00:01.57 Elapsed: 00:00:00.49
# Mc/sec: 6539.28
//
Query:       EPX72028.1  [L=288]
Description: plasma membrane protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-31  109.7  19.9    1.7e-31  109.5  19.9    1.0  1  Frag1     Frag1/DRAM/Sfk1 family
  ------ inclusion threshold ------
       0.64   10.1  14.1      0.078   13.1   1.2    2.9  3  DHHC      DHHC palmitoyltransferase
       0.96    9.6   6.8          1    9.5   1.2    2.8  3  DUF3180   Protein of unknown function (DUF3180)
        1.8    8.8   8.3        1.5    9.0   2.6    2.5  2  DUF4293   Domain of unknown function (DUF4293)
        2.9    8.3  16.5       0.33   11.3   1.9    2.8  3  DUF4199   Protein of unknown function (DUF4199)


Domain annotation for each model (and alignments):
>> Frag1  Frag1/DRAM/Sfk1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.5  19.9   4.7e-35   1.7e-31       2     216 ..      19     227 ..      18     230 .. 0.96

  Alignments for each domain:
  == domain 1  score: 109.5 bits;  conditional E-value: 4.7e-35
       Frag1   2 ffllpliafilwlgmliamlvcavvqgpvdyvfmhkeqflPyISdigatnpeslffslalnlglflvilvallrfqr....lpplatksernlnfaalv 96 
                 +fllpl++f++w+ +li++l ++ +q++ ++    +e  +++ISd+ga++ + +f+ +++++g+f++++++++r +r    l p  +k+e+ l ++a++
  EPX72028.1  19 LFLLPLVCFLMWTIGLIVLLGLWSTQDKWHTP---GEPDPVFISDMGAYT-KGFFVPMCVITGVFYILSFLAIRLLRqwrfLYPTTNKYETFLGWFAVL 113
                 799************************66455...6888***********.***********************999999999999999999******* PP

       Frag1  97 lgligalglllvsifstaeyhsvHlvgavvffvfgflyvllqtalyykmgrhy.vwnkstisfrlkvvllilavvlailfgvffvrhkkkcgygaysls 194
                 +   +a +l+ ++i +  ++ ++H+ +++ f+v+ f+ ++ +++++++ +rhy  ++   +sf+ k+ +++ a+v+ai+f+ +   +++       s+s
  EPX72028.1 114 TSAGCAACLISLAIRDDVHHDNIHWKFTAAFVVLAFVAAASNIFEWLSAHRHYrFSRLLAFSFWAKFTIIVTAIVCAIAFAGLRHYENR-------SKS 205
                 *****************************************************8899****************************9766.......9** PP

       Frag1 195 AifEWllafwfiiffltfsvDF 216
                 A fEW++ f++ +++ ++++D+
  EPX72028.1 206 ARFEWVVGFLWSLYIALLCLDI 227
                 ******************9997 PP

>> DHHC  DHHC palmitoyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   1.2   2.2e-05     0.078      48     129 ..      12     104 ..       9     107 .. 0.75
   2 ?    0.0   2.8      0.24   8.4e+02      53     110 ..     105     122 ..      62     166 .. 0.45
   3 ?    2.2   4.1     0.051   1.8e+02      52      87 ..     172     207 ..     124     234 .. 0.58

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 2.2e-05
        DHHC  48 ykyFllfllylllllilalvlllialvklveeekkseflavtllkk...........llsilllvlsllfllllgllllfhlylilrnlTtie 129
                  +y+  fl+ l l+++l+ ++ li l+ l+++++k++ +  + +             ++ + +++  + +l +l++ ll+++  ++  ++++e
  EPX72028.1  12 TRYWAYFLFLLPLVCFLMWTIGLIVLLGLWSTQDKWHTPGEPDPVFisdmgaytkgfFVPMCVITGVFYILSFLAIRLLRQWRFLYPTTNKYE 104
                 589999*****************************9998777666678899988775445555555555566666666667666665555555 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.24
        DHHC  53 lfllylllllilalvlllialvklveeekkseflavtllkkllsilllvlsllfllll 110
                 +fl                                          + ++ s+ +++ l
  EPX72028.1 105 TFL----------------------------------------GWFAVLTSAGCAACL 122
                 112........................................222222222222222 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.051
        DHHC  52 llfllylllllilalvlllialvklveeekksefla 87 
                 l+f ++  + +i++++++ ia+  l ++e+ s+  +
  EPX72028.1 172 LAFSFWAKFTIIVTAIVCAIAFAGLRHYENRSKSAR 207
                 445555555555555544444444444444444433 PP

>> DUF3180  Protein of unknown function (DUF3180)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.3     0.077   2.8e+02      25      87 ..      20      79 ..       7     122 .. 0.68
   2 ?    0.5   1.8      0.17   6.1e+02       6      38 ..     115     148 ..      74     153 .. 0.51
   3 ?    9.5   1.2   0.00028         1       1      55 [.     147     203 ..     144     222 .. 0.81

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.077
     DUF3180 25 plpwlaavvllvlavvelvlAlqvrrrirgrpgarqlepltaarllvlAkAsalvGAllaGvy 87
                 l  l+ ++++ +++++l+  ++++ + ++     + +p+++  + +  k   +   +++Gv+
  EPX72028.1 20 FLLPLVCFLMWTIGLIVLLGLWSTQDKWHTP---GEPDPVFISDMGAYTKGFFVPMCVITGVF 79
                5555677888889999988888888888555...78888888888888887777777777765 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.17
     DUF3180   6 vvaavagwllvrvsygslp.plpwlaavvllvla 38 
                  ++++a+++ + ++ +    +++w + ++ +vla
  EPX72028.1 115 SAGCAACLISLAIRDDVHHdNIHWKFTAAFVVLA 148
                 2222222222222333333344444444444444 PP

  == domain 3  score: 9.5 bits;  conditional E-value: 0.00028
     DUF3180   1 Lvaaavvaavagwllvrv..sygslpplpwlaavvllvlavvelvlAlqvrrrirgr 55 
                 L+ +a++  ++ wl +++  + ++l++++++a ++++v a+v++++   +r + ++ 
  EPX72028.1 147 LAFVAAASNIFEWLSAHRhyRFSRLLAFSFWAKFTIIVTAIVCAIAFAGLRHYENRS 203
                 45666677778888888877777888*******************999999988665 PP

>> DUF4293  Domain of unknown function (DUF4293)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   2.2     0.046   1.7e+02      39     133 ..      56     151 ..      17     164 .. 0.52
   2 ?    9.0   2.6   0.00042       1.5      46     101 ..     168     225 ..     113     244 .. 0.70

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.046
     DUF4293  39 lgvstaeaetsvnvsvwvlvilllliailaliaIflyknRk........lQlrlclinllllvllyvllallllvnkanaaaeslgesslkiglilpli 129
                 + +s  + + +++   +++ +++ +  il+++aI l ++              l ++ +l   + ++ l+   l    + +     + ++k+++++ ++
  EPX72028.1  56 VFIS--DMGAYTKGFFVPMCVITGVFYILSFLAIRLLRQWRflypttnkYETFLGWFAVLTSAGCAACLIS--LAIRDDVHHD---NIHWKFTAAFVVL 147
                 3333..55556677778888888888888888886655533233322223333334444444433333333..3333333333...3477777777776 PP

     DUF4293 130 alil 133
                 a+++
  EPX72028.1 148 AFVA 151
                 6665 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00042
     DUF4293  46 aetsvnvsvwvlv..illlliailaliaIflyknRklQlrlclinllllvllyvllal 101
                  +   ++s w+++  i++++++ +a++ +  y+nR+  +r+ ++  +l  l+++ll+l
  EPX72028.1 168 FSRLLAFSFWAKFtiIVTAIVCAIAFAGLRHYENRSKSARFEWVVGFLWSLYIALLCL 225
                 33345566666552277889999*********************99999999999887 PP

>> DUF4199  Protein of unknown function (DUF4199)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.3      0.75   2.7e+03      33      50 ..      22      38 ..       9      49 .. 0.50
   2 ?   11.3   1.9   9.3e-05      0.33       4      82 ..      74     152 ..      72     161 .. 0.67
   3 ?    3.7   6.6     0.021        75       7      84 ..     148     224 ..     140     228 .. 0.62

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.75
     DUF4199 33 lgllallllllvpflvyl 50
                l l+++l++ +  ++v+l
  EPX72028.1 22 LPLVCFLMWTI-GLIVLL 38
                33333333333.333333 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 9.3e-05
     DUF4199   4 lilglvwilifllilyllglh.qi.lstg..pllgllallllllvpflvylalkkyrkknlgGfisfgqafgfgflislvagl 82 
                 +i+g+++il+fl+i +l ++   + ++++  ++lg++a+l ++ + ++++ +    r+ +   +i+++    f++l   + + 
  EPX72028.1  74 VITGVFYILSFLAIRLLRQWRfLYpTTNKyeTFLGWFAVLTSAGCAACLISLAI--RDDVHHDNIHWKFTAAFVVLA--FVAA 152
                 79**********9666666655554444478*******9999998666666666..777755577777444444443..3333 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.021
     DUF4199   7 glvwilifllilyllglh.qi.lstgpllglla...llllllvpflvylalkkyrkknlgGfisfgqafgfgflislvaglls 84 
                 + v +++ +  +  l+ h ++ +s   ++++ a   ++ +++v ++++ +l++y ++      s +  + +gfl sl+++ll+
  EPX72028.1 148 AFVAAASNI--FEWLSAHrHYrFSRLLAFSFWAkftIIVTAIVCAIAFAGLRHYENRS----KSARFEWVVGFLWSLYIALLC 224
                 333333333..35666666665555555555556778888888999999***995554....345555777777777777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       841  (0.0469072); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 2017.70
//
Query:       EPX72029.1  [L=778]
Description: U3 snoRNP-associated protein Utp13 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.7e-58  192.6  26.2    3.9e-07   30.7   0.1   10.3 10  WD40           WD domain, G-beta repeat
      5e-48  162.6   0.0    7.8e-48  162.0   0.0    1.3  1  Utp13          Utp13 specific WD40 associated domain
    2.7e-23   82.1   8.3    0.00021   21.5   0.0    7.5  6  ANAPC4_WD40    Anaphase-promoting complex subunit 4 WD40 doma
    6.8e-06   25.0   7.4       0.23   10.1   0.0    5.5  6  Nup160         Nucleoporin Nup120/160
    1.8e-05   23.9   3.4       0.84    8.5   0.0    4.6  5  Ge1_WD40       WD40 region of Ge1, enhancer of mRNA-decapping
    8.5e-05   22.0   0.3      0.017   14.5   0.0    3.3  2  Mcl1_mid       Minichromosome loss protein, Mcl1, middle regi
    0.00029   19.7   0.4        3.9    6.1   0.0    4.3  4  Nucleoporin_N  Nup133 N terminal like
     0.0038   16.6   0.0      0.051   12.9   0.0    2.6  2  Nbas_N         Neuroblastoma-amplified sequence, N terminal
     0.0052   15.4   1.1      0.028   13.0   0.0    2.5  3  Cytochrom_D1   Cytochrome D1 heme domain
  ------ inclusion threshold ------
          1    8.2   5.8       0.87    8.5   0.6    3.1  4  PALB2_WD40     Partner and localizer of BRCA2 WD40 domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   1.8e-06    0.0032       2      38 .]      94     131 ..      93     131 .. 0.93
   2 !   23.7   0.4   3.5e-08   6.3e-05       3      38 .]     137     175 ..     135     175 .. 0.83
   3 !   29.4   0.1   5.6e-10     1e-06       5      38 .]     183     217 ..     179     217 .. 0.90
   4 ?   -2.3   0.0       5.8     1e+04       8      27 ..     321     341 ..     317     357 .. 0.60
   5 !   21.9   0.2   1.3e-07   0.00023       5      38 .]     359     393 ..     354     393 .. 0.90
   6 !   16.4   0.0   6.8e-06     0.012       2      35 ..     402     441 ..     401     444 .. 0.81
   7 !   20.7   0.2     3e-07   0.00054       4      38 .]     459     494 ..     456     494 .. 0.92
   8 !   30.7   0.1   2.2e-10   3.9e-07       2      38 .]     499     536 ..     498     536 .. 0.92
   9 !   22.3   0.0   9.2e-08   0.00017       2      38 .]     541     578 ..     540     578 .. 0.86
  10 !   20.4   0.1   3.9e-07    0.0007       1      37 [.     582     619 ..     582     620 .. 0.94

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 1.8e-06
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 + l+++++H ++v  +  +p ++ la+G+  g v++Wd
  EPX72029.1  94 KRLKSFKAHeTPVITMTIDPTNSILATGGAEGLVKVWD 131
                 7799*****999889999*******************9 PP

  == domain 2  score: 23.7 bits;  conditional E-value: 3.5e-08
                 EEEEEESSSS.EEEEE.EETTSSE.EEEEETTSEEEEEE CS
        WD40   3 clrtltGHss.vtsla.fspdgaw.lasGsdDgtvriWd 38 
                 ++++l+GH++ v++l+     g+w lasG dD  vr+Wd
  EPX72029.1 137 TTHVLRGHGGiVSALCfGKYQGKWvLASGADDTRVRLWD 175
                 6899****5548***9888888884468999*******9 PP

  == domain 3  score: 29.4 bits;  conditional E-value: 5.6e-10
                 EEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGHss.vtslafspdgawlasGsdDgtvriWd 38 
                   ++GHss +++l f+ +g++l+sGs+D+tv +Wd
  EPX72029.1 183 AAFEGHSSvIRGLTFDESGSFLLSGSRDNTVQVWD 217
                 5699**8857************************9 PP

  == domain 4  score: -2.3 bits;  conditional E-value: 5.8
                 ESSSS.EEEEEEETTSSEEEE CS
        WD40   8 tGHss.vtslafspdgawlas 27 
                  G ++ v ++a+  d+++ ++
  EPX72029.1 321 HGSFDeVIDCAWIGDNHLAIA 341
                 444225668877777777443 PP

  == domain 5  score: 21.9 bits;  conditional E-value: 1.3e-07
                 EEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGHss.vtslafspdgawlasGsdDgtvriWd 38 
                 ++l+GH++ v ++  s dg w+a+G +D+t r+W+
  EPX72029.1 359 GVLSGHTDiVLAMHASEDGVWMATGAKDNTTRLWN 393
                 5799**7747************************8 PP

  == domain 6  score: 16.4 bits;  conditional E-value: 6.8e-06
                 EEEEEEESS.SSEEEEE.....EETTSSEEEEEETTSEEE CS
        WD40   2 qclrtltGH.ssvtsla.....fspdgawlasGsdDgtvr 35 
                 +c+r++tGH  svt++a      +   ++l+s+s D+t++
  EPX72029.1 402 TCVRVFTGHtASVTAVAlgpldAQGFPSFLTSASQDRTLK 441
                 79*******888****87777755555669999*****98 PP

  == domain 7  score: 20.7 bits;  conditional E-value: 3e-07
                 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++t+++H  +++++++s dg+ +a+ s D+ +++Wd
  EPX72029.1 459 IWTIKAHdRDINAIQVSTDGRIIATVSQDKLIKLWD 494
                 67899**766*************************9 PP

  == domain 8  score: 30.7 bits;  conditional E-value: 2.2e-10
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 + +++l+GH  +v+++ f+p+++ lasGs D+tvr+W+
  EPX72029.1 499 EVIGVLRGHrRGVWACVFNPYSRQLASGSGDRTVRVWS 536
                 67899****888****************99*******5 PP

  == domain 9  score: 22.3 bits;  conditional E-value: 9.2e-08
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 qcl+tl+GH + v  la+ + g+ l+s+  Dg v++W+
  EPX72029.1 541 QCLHTLEGHtGAVLKLAYISRGTQLVSAAADGLVKVWS 578
                 9********777****97777777888877*******5 PP

  == domain 10  score: 20.4 bits;  conditional E-value: 3.9e-07
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 g+c+ tl+ H + v+++a+ +dga ++sG+ D  v iW
  EPX72029.1 582 GECVATLDNHeDRVWAVAVRDDGARIVSGGADAVVSIW 619
                 68********777************************* PP

>> Utp13  Utp13 specific WD40 associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  162.0   0.0   4.3e-51   7.8e-48       1     138 [.     641     777 ..     641     778 .] 0.98

  Alignments for each domain:
  == domain 1  score: 162.0 bits;  conditional E-value: 4.3e-51
                 -HHHHHHHHCCHHHHHHHHHHHSSSTHHHHHHHHHHHS-SS--STSSSSSHHHHHHHHC--HHHHHHHHHHHHHHHTSTTTHHHHHHHHHHHHHHS-HH CS
       Utp13   1 eqelqnllrkkdyreAiaLAlkldqpkrllkllkevleseeeeeesitgskevdevlkslskeqleklLkyirdWntnartsevAqrvLnailkslsae 99 
                 eq+l+n+ +++d+r+AiaLAl+ld+p  ll+l+++v++s  ++++sitg+ +vd+v++ ls++ql+ l+++irdWn n++ts vAqr+L+ +l+ ++++
  EPX72029.1 641 EQSLSNYEKAEDWRNAIALALSLDRPLGLLRLFERVMNSP-HQKGSITGNVDVDKVVSDLSDNQLTILFQRIRDWNVNNKTSMVAQRLLRLLLHAYPPK 738
                 7************************************765.69******************************************************** PP

                 HHHS---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       Utp13 100 elleleglkellealipYteRHlkRldrlveesylldyt 138
                 +lle++g+k + +++ pYt+RHl+R+++l+eesy++dy+
  EPX72029.1 739 HLLEIPGIKGIFDSMFPYTQRHLSRINDLLEESYIVDYV 777
                 **************************************8 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.0   4.1e-05     0.074      26      87 ..      50     109 ..      30     114 .. 0.90
   2 !    6.3   0.0    0.0068        12      34      79 ..     141     188 ..     111     191 .. 0.73
   3 !   21.5   0.0   1.2e-07   0.00021      10      90 ..     162     239 ..     161     241 .. 0.88
   4 !    8.5   0.1    0.0014       2.4      10      69 ..     338     398 ..     333     419 .. 0.84
   5 !   15.2   0.2   1.1e-05      0.02      27      80 ..     457     508 ..     448     516 .. 0.88
   6 !   18.4   0.1   1.1e-06     0.002      11      84 ..     524     595 ..     514     618 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 4.1e-05
  ANAPC4_WD40  26 gqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtcl 87 
                  g+++++l +++e+  v+s+    d + L+va+    v ++++ sgk ++s++++++  v ++
   EPX72029.1  50 GEKIFSL-NKDEEDYVTSMVITGDASRLVVAFRSRLVIIYEIPSGKRLKSFKAHETP-VITM 109
                  6899**9.7888899***************************************996.5544 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0068
  ANAPC4_WD40  34 edkedsevrsLaW.kpdgk.lLavaysdgevrlldaesgkvvhslsvk 79 
                    ++++ v++L++ k +gk +La + +d++vrl d ++ + + +++ +
   EPX72029.1 141 LRGHGGIVSALCFgKYQGKwVLASGADDTRVRLWDLNTSRSIAAFEGH 188
                  4567888999999556787689***************99999888766 PP

  == domain 3  score: 21.5 bits;  conditional E-value: 1.2e-07
  ANAPC4_WD40  10 iAlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  +A + +d ++++  ln  r   +  ++++s +r+L + ++g++L  +  d++v++ d ++   v++++v +   v +lgW 
   EPX72029.1 162 LASGADDTRVRLWDLNTSRSIAA-FEGHSSVIRGLTFDESGSFLLSGSRDNTVQVWDLKKRSAVRTIPVLHG--VESLGWV 239
                  56677888888888888776665.589999****************************************99..9*****6 PP

  == domain 4  score: 8.5 bits;  conditional E-value: 0.0014
  ANAPC4_WD40  10 iAlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrl..ldaes 69 
                  +A+a++++ + +   +g +v ++  +++   v +++ ++dg  +a + +d++ rl  ld+e+
   EPX72029.1 338 LAIASNTEYIDIISADGTQVHGV-LSGHTDIVLAMHASEDGVWMATGAKDNTTRLwnLDVEN 398
                  79*********************.6888999***********************93334554 PP

  == domain 5  score: 15.2 bits;  conditional E-value: 1.1e-05
  ANAPC4_WD40  27 qrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvks 80 
                  + +wt+  +++d+ +++++ + dg+++a + +d  ++l da+ g+v+  l+ ++
   EPX72029.1 457 RAIWTI--KAHDRDINAIQVSTDGRIIATVSQDKLIKLWDASLGEVIGVLRGHR 508
                  679***..9************************************998776665 PP

  == domain 6  score: 18.4 bits;  conditional E-value: 1.1e-06
  ANAPC4_WD40  11 AlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekav 84 
                  A ++ d  ++v  ++ q+  ++  +++ + v +La+   g+ L+ a +dg v++ ++ sg++v +l+ ++++ v
   EPX72029.1 524 ASGSGDRTVRVWSMDEQQCLHT-LEGHTGAVLKLAYISRGTQLVSAAADGLVKVWSIASGECVATLDNHEDR-V 595
                  5566666677777776666666.689999*************************************999884.4 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       1.9   3.3e+03     228     250 ..     110     135 ..     101     140 .. 0.74
   2 ?    0.3   0.1      0.12   2.1e+02     230     254 ..     159     183 ..     144     190 .. 0.77
   3 !   10.1   0.0   0.00013      0.23     231     259 ..     202     230 ..     188     256 .. 0.80
   4 ?    2.6   0.1     0.023        42     220     247 ..     470     495 ..     448     501 .. 0.82
   5 !    4.7   0.1    0.0054       9.7     237     255 ..     527     545 ..     519     558 .. 0.87
   6 !    5.8   0.0    0.0025       4.6     231     257 ..     563     589 ..     550     603 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 1.9
                 ....TTTEEEEEETT-EEEEEETTTT CS
      Nup160 228 i...gqtylfalsrdgkLrvWnlltg 250
                 +   ++++l++    g ++vW+l+ g
  EPX72029.1 110 TidpTNSILATGGAEGLVKVWDLTGG 135
                 23457888888889999*****9876 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.12
                 TTEEEEEETT-EEEEEETTTTEEEE CS
      Nup160 230 qtylfalsrdgkLrvWnlltgkcla 254
                 + +l++   d ++r+W+l+t + +a
  EPX72029.1 159 KWVLASGADDTRVRLWDLNTSRSIA 183
                 556666667999********98876 PP

  == domain 3  score: 10.1 bits;  conditional E-value: 0.00013
                 TEEEEEETT-EEEEEETTTTEEEEEEE-- CS
      Nup160 231 tylfalsrdgkLrvWnlltgkclatidll 259
                 ++l++ srd++++vW+l+  + ++ti  l
  EPX72029.1 202 SFLLSGSRDNTVQVWDLKKRSAVRTIPVL 230
                 789999*******************9877 PP

  == domain 4  score: 2.6 bits;  conditional E-value: 0.023
                 EEET.....TTTEEEEEETT-EEEEEET CS
      Nup160 220 dvavavveigqtylfalsrdgkLrvWnl 247
                 ++++ v++ +  +++++s+d+ +++W+ 
  EPX72029.1 470 NAIQ-VST-DGRIIATVSQDKLIKLWDA 495
                 4444.555.999**************96 PP

  == domain 5  score: 4.7 bits;  conditional E-value: 0.0054
                 ETT-EEEEEETTTTEEEEE CS
      Nup160 237 srdgkLrvWnlltgkclat 255
                 s d+++rvW+ + ++cl t
  EPX72029.1 527 SGDRTVRVWSMDEQQCLHT 545
                 679*************998 PP

  == domain 6  score: 5.8 bits;  conditional E-value: 0.0025
                 TEEEEEETT-EEEEEETTTTEEEEEEE CS
      Nup160 231 tylfalsrdgkLrvWnlltgkclatid 257
                 t l+++  dg ++vW++++g c+at d
  EPX72029.1 563 TQLVSAAADGLVKVWSIASGECVATLD 589
                 55788999****************977 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.71   1.3e+03     188     216 ..     104     132 ..      92     139 .. 0.81
   2 ?   -3.8   0.0       2.7   4.9e+03     184     216 ..     185     218 ..     176     224 .. 0.67
   3 !    4.7   0.0     0.007        13     164     227 ..     341     404 ..     333     417 .. 0.75
   4 !    8.5   0.0   0.00047      0.84     173     216 ..     451     495 ..     437     503 .. 0.80
   5 !    7.3   0.1    0.0011         2     176     217 ..     538     580 ..     526     597 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.71
    Ge1_WD40 188 sliveaafspdGtalatasedGevkffqv 216
                 + +++ ++ p    lat  ++G+vk + +
  EPX72029.1 104 TPVITMTIDPTNSILATGGAEGLVKVWDL 132
                 45677788999999***********9975 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 2.7
    Ge1_WD40 184 ieehs.liveaafspdGtalatasedGevkffqv 216
                 +e hs  i   +f   G  l   s d +v+ + +
  EPX72029.1 185 FEGHSsVIRGLTFDESGSFLLSGSRDNTVQVWDL 218
                 5666535556677777777777777777777754 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.007
    Ge1_WD40 164 askygsgelsveeieegllkieehsliveaa.fspdGtalatasedGevkffqvyledeeeprCL 227
                 as+ + +++ +++ +++   ++ h+ iv a+  s dG  +at ++d + +++ + +e+++   C+
  EPX72029.1 341 ASNTEYIDIISADGTQVHGVLSGHTDIVLAMhASEDGVWMATGAKDNTTRLWNLDVENNR-FTCV 404
                 55556666666777777777888997766651689*****************99887654.4565 PP

  == domain 4  score: 8.5 bits;  conditional E-value: 0.00047
    Ge1_WD40 173 sveeieegllkieehs.liveaafspdGtalatasedGevkffqv 216
                 ++e++++++  i+ h   i    +s+dG  +at s+d ++k++  
  EPX72029.1 451 NSENQSRAIWTIKAHDrDINAIQVSTDGRIIATVSQDKLIKLWDA 495
                 44455568889999975899999*******************976 PP

  == domain 5  score: 7.3 bits;  conditional E-value: 0.0011
    Ge1_WD40 176 eieegllkieehs.liveaafspdGtalatasedGevkffqvy 217
                 + ++ l  +e h+  + + a+ + Gt l  a++dG+vk + + 
  EPX72029.1 538 DEQQCLHTLEGHTgAVLKLAYISRGTQLVSAAADGLVKVWSIA 580
                 55566777888877899999999*****************985 PP

>> Mcl1_mid  Minichromosome loss protein, Mcl1, middle region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.026        46     102     158 ..      55     115 ..      39     265 .. 0.68
   2 !   14.5   0.0   9.6e-06     0.017     104     186 ..     319     400 ..     315     472 .. 0.81

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.026
    Mcl1_mid 102 svkLpegEevtavalgkkw..vavaTskrylRiFsl.sGvqlavlslpg.pvVtlaaskdk 158
                 s++ +e+++vt+++++++    +va  +r++ i+++ sG  l+ ++ ++ pv+t++  + +
  EPX72029.1  55 SLNKDEEDYVTSMVITGDAsrLVVAFRSRLVIIYEIpSGKRLKSFKAHEtPVITMTIDPTN 115
                 4444455778877777665558888888888888863567778888777788888755554 PP

  == domain 2  score: 14.5 bits;  conditional E-value: 9.6e-06
    Mcl1_mid 104 kLpeg..EevtavalgkkwvavaTskrylRiFslsGvqla.vlslpg.pvVtlaaskdklavvyhegaplngnqeleyslldlskkk 186
                 kL+ +  E +++  +g++  a+a++++y+ i s  G+q++ vls +   v+++ as+d + +++       ++++ +++ ld+++++
  EPX72029.1 319 KLHGSfdEVIDCAWIGDNHLAIASNTEYIDIISADGTQVHgVLSGHTdIVLAMHASEDGVWMAT-----GAKDNTTRLWNLDVENNR 400
                 666556699*****************************983455444356799***********.....556666666666666654 PP

>> Nucleoporin_N  Nup133 N terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.1   0.0    0.0022       3.9     196     240 ..      98     142 ..      78     177 .. 0.82
   2 ?    1.4   0.0     0.059   1.1e+02     198     234 ..     186     222 ..     171     294 .. 0.81
   3 !    6.0   0.0    0.0023       4.2     125     230 ..     358     495 ..     343     499 .. 0.69
   4 ?   -0.1   0.0      0.16   2.9e+02     199     261 ..     506     570 ..     496     609 .. 0.49

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0022
                    G----GG-EEEEEEECCTCEEEEEETTSEEEEEEEETTCEE-EEE CS
  Nucleoporin_N 196 sgasereeivqlridssrrilytlsskgvirvydlsasngesslk 240
                    s +  + +++ ++id++  il t  ++g ++v+dl+  ++ + l+
     EPX72029.1  98 SFKAHETPVITMTIDPTNSILATGGAEGLVKVWDLTGGYTTHVLR 142
                    34567889***************************9666666665 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.059
                    ---GG-EEEEEEECCTCEEEEEETTSEEEEEEEETTC CS
  Nucleoporin_N 198 asereeivqlridssrrilytlsskgvirvydlsasn 234
                       ++ i  l+ d+s   l + s++ +++v+dl +++
     EPX72029.1 186 EGHSSVIRGLTFDESGSFLLSGSRDNTVQVWDLKKRS 222
                    4567888999999999999999999999999999654 PP

  == domain 3  score: 6.0 bits;  conditional E-value: 0.0023
                    EEE--EETT.TTEEEEEEETTTC-EEEEETTS...SEEEEEEC-SSS-CEEEEEEEEE-SSSS-........--SSS--G................ CS
  Nucleoporin_N 125 ntdlsvssdgeivtqvinseptgriflagstg...rlyeltyrdssgwpslkckkicltkggls.sll....silpgvls................ 196
                    ++ ls+++d  iv  + +se +g   ++g+ +   rl+ l++ +   +++ +  +  +t +     l+      +p++l+                
     EPX72029.1 358 HGVLSGHTD--IVLAMHASE-DGVWMATGAKDnttRLWNLDVENN--RFTCVRVFTGHTASVTAvALGpldaQGFPSFLTsasqdrtlkrydlgss 448
                    555555554..444444444.776677777767777887777653..3333333444444444433335577777777777777888888888888 PP

                    ...----GG-EEEEEEECCT..........CEEEEEETTSEEEEEEE CS
  Nucleoporin_N 197 ...gasereeivqlridssr..........rilytlsskgvirvydl 230
                       + +++ +i+ +++++            ri+ t+s+++ i+ +d 
     EPX72029.1 449 lanSENQSRAIWTIKAHDRDinaiqvstdgRIIATVSQDKLIKLWDA 495
                    888888888888888888888888888888***************95 PP

  == domain 4  score: -0.1 bits;  conditional E-value: 0.16
                    --GG-EEEEEEECCTCEEEEEETTSEEEEEEEETTCEE-EEEEE..EEHHHHHHHH.HHSCHTTT CS
  Nucleoporin_N 199 sereeivqlridssrrilytlsskgvirvydlsasngesslksd..idirqilleaitesliasa 261
                      r  +++ +  + +r l + s ++++rv+ +  ++  ++l+++  + ++ ++++++t+ + a+a
     EPX72029.1 506 GHRRGVWACVFNPYSRQLASGSGDRTVRVWSMDEQQCLHTLEGHtgAVLKLAYISRGTQLVSAAA 570
                    55666777777777777777777777777777733334444333113334444444333333333 PP

>> Nbas_N  Neuroblastoma-amplified sequence, N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.0   2.9e-05     0.051     220     274 ..      52     106 ..      29     134 .. 0.90
   2 ?    0.2   0.0      0.21   3.8e+02     227     269 ..     548     590 ..     507     620 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2.9e-05
      Nbas_N 220 klysrkaeekdgvfkmslspdgtllavihfsgklsiwdipslkqrgeweqeeqpg 274
                 k++s +++e+d v  m ++ d ++l v   s  + i++ips k+  +++ +e p 
  EPX72029.1  52 KIFSLNKDEEDYVTSMVITGDASRLVVAFRSRLVIIYEIPSGKRLKSFKAHETPV 106
                 89***********************99888888899********99999999885 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.21
      Nbas_N 227 eekdgvfkmslspdgtllavihfsgklsiwdipslkqrgeweq 269
                      v+k++    gt l      g + +w+i s +  ++ ++
  EPX72029.1 548 GHTGAVLKLAYISRGTQLVSAAADGLVKVWSIASGECVATLDN 590
                 4456688888888889888888889999998888666655554 PP

>> Cytochrom_D1  Cytochrome D1 heme domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.0   1.6e-05     0.028      12      80 ..     166     236 ..     161     253 .. 0.86
   2 ?   -0.6   0.1       0.2   3.6e+02      12      79 ..     342     412 ..     336     420 .. 0.77
   3 ?   -3.1   0.0       1.2   2.1e+03      43      63 ..     474     494 ..     458     505 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.6e-05
                   GGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT.SSEEEEEETTSEEEEEESSSSSEEEEE..E-SSEEE CS
  Cytochrom_D1  12 rdagkvalldgdskeilavletgyalHisrvfasdgRyvyvigRDgkvtliDLwakeivaev..kiGlnar 80 
                   +d+ +v+l d ++ +++a +e++  +  +  f + g +++  +RD +v++ DL ++  v+++    G+++ 
    EPX72029.1 166 ADDTRVRLWDLNTSRSIAAFEGHSSVIRGLTFDESGSFLLSGSRDNTVQVWDLKKRSAVRTIpvLHGVESL 236
                   58899**************************************************9999986114566665 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.2
                   GGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT.SSEEEEEETTSEEEEEESSSSS...EEEEEE-SSEE CS
  Cytochrom_D1  12 rdagkvalldgdskeilavletgyalHisrvfasdgRyvyvigRDgkvtliDLwake...ivaevkiGlna 79 
                   +++  + ++ +d ++   vl ++ ++  +   ++dg ++ + ++D ++ l  L  ++   +  +v  G  a
    EPX72029.1 342 SNTEYIDIISADGTQVHGVLSGHTDIVLAMHASEDGVWMATGAKDNTTRLWNLDVENnrfTCVRVFTGHTA 412
                   567789999999999999999**999999999999999999999988776554433333777777777665 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 1.2
                   -TT.SSEEEEEETTSEEEEEE CS
  Cytochrom_D1  43 fasdgRyvyvigRDgkvtliD 63 
                    + dgR + +++ D  ++l D
    EPX72029.1 474 VSTDGRIIATVSQDKLIKLWD 494
                   577899999999998888877 PP

>> PALB2_WD40  Partner and localizer of BRCA2 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.92   1.7e+03     300     320 ..     123     143 ..      79     168 .. 0.72
   2 ?    0.5   0.1      0.13   2.3e+02     298     350 ..     161     216 ..     153     217 .. 0.81
   3 ?   -2.1   0.0      0.78   1.4e+03     294     326 ..     480     512 ..     408     536 .. 0.60
   4 ?    8.5   0.6   0.00048      0.87     297     350 ..     567     619 ..     538     620 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.92
  PALB2_WD40 300 tsGaiavWdlllghctalllp 320
                 + G + vWdl  g  t +l  
  EPX72029.1 123 AEGLVKVWDLTGGYTTHVLRG 143
                 346688999998888877765 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.13
  PALB2_WD40 298 vltsGa....iavWdlllghctalllpesdesWslvrWsgtdsqllaGqkdGsvlvy 350
                 vl+sGa    + +Wdl  ++  a +  +s     l  + ++ s ll+G +d +v v+
  EPX72029.1 161 VLASGAddtrVRLWDLNTSRSIAAFEGHSSVIRGL-TFDESGSFLLSGSRDNTVQVW 216
                 6666655555899*******999988888776665.589999*********999886 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 0.78
  PALB2_WD40 294 laaavltsGaiavWdlllghctalllpesdesW 326
                 ++a+v     i +Wd  lg+   +l  +    W
  EPX72029.1 480 IIATVSQDKLIKLWDASLGEVIGVLRGHRRGVW 512
                 334444444455555555555555555555555 PP

  == domain 4  score: 8.5 bits;  conditional E-value: 0.00048
  PALB2_WD40 297 avltsGaiavWdlllghctalllpesdesWslvrWsgtdsqllaGqkdGsvlvy 350
                 +  + G + vW +  g+c a l  + d+ W++    +  +++++G +d  v ++
  EPX72029.1 567 SAAADGLVKVWSIASGECVATLDNHEDRVWAV-AVRDDGARIVSGGADAVVSIW 619
                 3346799***********************95.445667778888888777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (778 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       540  (0.0301188); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.78u 0.31s 00:00:01.09 Elapsed: 00:00:00.46
# Mc/sec: 5076.83
//
Query:       EPX72030.1  [L=482]
Description: DUF2009 protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   7.4e-187  621.9   0.1   8.5e-187  621.8   0.1    1.0  1  DUF2009   Protein of unknown function (DUF2009)


Domain annotation for each model (and alignments):
>> DUF2009  Protein of unknown function (DUF2009)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  621.8   0.1  4.7e-191  8.5e-187       1     456 []      26     481 ..      26     481 .. 0.96

  Alignments for each domain:
  == domain 1  score: 621.8 bits;  conditional E-value: 4.7e-191
     DUF2009   1 rakyiplRLteeeRkllrlleaalkvseYtdkvDilsvkskekriveqlkelcsilsglvvasdlkkgqelleekefaenaeflqkvfEigRRyKilnP 99 
                 ++k++plRL+e+eR++l lleaal+v+eYtd+vDi+s++s++k++v+ l+e+csil+glvva+d+k g++ll+ k++a+na+f++++fEigRRyKi+nP
  EPX72030.1  26 KSKFVPLRLNEDERRILGLLEAALNVIEYTDRVDIISYTSRTKLMVTYLSEMCSILTGLVVAMDIKLGRSLLQGKDHATNADFFKSIFEIGRRYKIMNP 124
                 589************************************************************************************************ PP

     DUF2009 100 ekmreeygkliyllqDsvkpevkealefklvkpiktvesvleekealelledk.lielataeisaekksreeiqkeikekeeaieklakkysskk.lsk 196
                 ekmr++yg ++y++qDs+ p+v+ +++f+++ piktv +vlee+++l++l++k l++ ++++i + + +    +k  +e++++ + l+kky++ +  +k
  EPX72030.1 125 EKMRTTYGAMMYMCQDSMIPDVRMQMGFDFYIPIKTVFRVLEENGLLDILSEKqLLDSSLKQIDPYAGAS-LRSKISEERKKSSDVLLKKYAKGNdEKK 222
                 **************************************************99834678899998655443.334455677889999*******775888 PP

     DUF2009 197 eeieqvlysiednnafleanrepvekllkllekffepekeeeklslaikaGkdGarlthdHekqyqyvlqsLtlWkeilkemfklWllaeedllseees 295
                   +e++l s++d+++fl anr pvek++ +l++ff+ ++ +++ +l+i + ++GarlthdH++q+ yv qsL++W+ ++++mf lWl +++ l++++++
  EPX72030.1 223 RVLEDCLISLADHESFLMANRVPVEKMRFYLHEFFSSQDPKKGGNLKIGF-MNGARLTHDHRTQFFYVDQSLQFWSCMMDQMFLLWLQSDASLVDKDTR 320
                 899***********************************************.************************************************ PP

     DUF2009 296 YelantgqGlnRvqkapkvskamekilsetqkklg.eWvGssvvHlGDrnvPnalvFiDKYtqvprilsPivktleeleklaedpelkeyieeefgsve 393
                 Y +++tgqGlnRvq +p ++ +++kils +q++ + +W+GssvvHlGDr+vPnal+FiDKY+qvp+il+P+vk+l++le l  dp l +yieee+gs+ 
  EPX72030.1 321 YFISDTGQGLNRVQPCPLLRGTVHKILSGVQNEQElSWIGSSVVHLGDRAVPNALMFIDKYRQVPHILTPLVKVLQQLEYLR-DPFLVQYIEEEYGSIV 418
                 **********************************99********************************************99.**************** PP

     DUF2009 394 elkktiLsdffrhaFdGsGadnffdaGsCiDGrltsawnwcskiekkkyykiflltgftgFdG 456
                  l+kt+L dff+haFdG+Gadn++daGsCiDGrltsawnw+++i+kkkyy+i+l++gf +F+G
  EPX72030.1 419 GLQKTLLLDFFKHAFDGRGADNWYDAGSCIDGRLTSAWNWTNEISKKKYYRILLMSGFLNFEG 481
                 *************************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (482 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       456  (0.0254337); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 3297.41
//
Query:       EPX72031.1  [L=1005]
Description: sorting nexin Snx12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.7e-33  116.1   0.9    1.7e-33  116.1   0.9    3.1  3  PXA              PXA domain
    9.2e-21   73.9   0.3    9.2e-21   73.9   0.3    3.8  4  PX               PX domain
    6.4e-17   61.9   0.4    6.4e-17   61.9   0.4    2.9  2  RGS              Regulator of G protein signaling domain
    3.4e-05   24.4   0.4    0.00015   22.3   0.4    2.2  1  Nexin_C          Sorting nexin C terminal
     0.0048   16.9   1.7      0.017   15.1   1.7    2.0  1  PilJ             Type IV pili methyl-accepting chemotaxis tra
  ------ inclusion threshold ------
       0.12   12.8   0.4       0.47   10.9   0.4    2.0  1  IATP             Mitochondrial ATPase inhibitor, IATP
       0.16   12.1   8.5       0.26   11.4   3.0    2.6  2  ApoLp-III        Apolipophorin-III precursor (apoLp-III)
       0.44    9.8   4.9       0.67    9.2   4.9    1.3  1  O_anti_polymase  Putative O-antigen polymerase
       0.73   10.3   5.4       0.86   10.1   2.7    2.6  2  Cep57_MT_bd      Centrosome microtubule-binding domain of Cep
       0.98    9.2  10.9       0.44   10.4   2.7    3.1  3  Yuri_gagarin     Yuri gagarin
        2.8    7.7   5.8          3    7.6   0.3    3.0  3  DUF4132          Domain of unknown function (DUF4132)
          3    8.4  15.3       0.87   10.1   5.2    3.3  3  Spectrin         Spectrin repeat
        3.2    8.4   8.0        4.5    8.0   2.2    3.4  3  YabA             Initiation control protein YabA


Domain annotation for each model (and alignments):
>> PXA  PXA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.1   0.9   1.2e-36   1.7e-33       2     181 ..      90     270 ..      89     271 .. 0.95
   2 ?    2.0   1.1      0.13   1.7e+02      53     154 ..     677     805 ..     552     811 .. 0.71
   3 ?   -3.1   0.0       4.8   6.7e+03      72     111 ..     917     968 ..     885     992 .. 0.49

  Alignments for each domain:
  == domain 1  score: 116.1 bits;  conditional E-value: 1.2e-36
         PXA   2 peldeelhellalilrdfVlsWYskissdeeFptevrsilrsviralanrlkkvDlaqllltrlldlltshlrdyrqaeekvkskkae.....eesdld 95 
                 pe++eel+ +l+  ++ +V++W s+i  +++ p+++++++r++i++l   +++vD+a++l++++l+llt+hlr++ +ae+ v + ka       e++++
  EPX72031.1  90 PEISEELEFILENFMERYVKKWSSQIIGEPTIPNSIENHFRKCIHNLFLSVETVDFADILIKKILPLLTQHLRLFVEAEQLVVGHKAVsftdhSELSKE 188
                 89************************88****************************************************999998889********** PP

         PXA  96 laakffalephpalsavlrdieeskeaelaylrslverlLslllppedlesetvrtlvreilanvvlkplleklsdPdfinqliik 181
                 +aak++++++h a+   l  + +   a+++ylr+ + ++Ls +lp+   +s+ v +l++ei+ n+vl+pl++ +sdPdf+n lii+
  EPX72031.1 189 IAAKYNNGSLHKAIL--L--SGNPMVAQKKYLRNWTIQVLSIILPNYYQTSPLVISLITEIIINIVLLPLISYVSDPDFFNYLIIQ 270
                 ************994..3..24566779********************************************************86 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.13
         PXA  53 kkvDlaqllltrlldlltshlrdyrqaeekvkskkae.................................................eesdldlaakffa 102
                 +                                   +                                                  +s  ++a+++++
  EPX72031.1 677 R-----------------------------------QvdqylsqeedsklynrsrisidfyklckddneqeyavytirierlegdvIRSGWMVARRYRE 740
                 3...................................133334444444444444444444444443333334446666667766665666677777777 PP

         PXA 103 .lephpalsavlrd...........ieeskeaelaylrslverlLslllppedl.esetvrtlvr 154
                  +e+h +l+++  +           i++ +++ l+y + + ++ L+++++ +d  +s+++r++++
  EPX72031.1 741 fAELHKQLKQMFPQvrflkfpsktvIPSVTKSILEYRKIALKEYLQSIFQMPDVcDSKILRMFLS 805
                 78888888877777888888888886666666799999999999999988888559999998876 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 4.8
         PXA  72 hlrdyrqaeekvkskkae............eesdldlaakffalephpalsa 111
                 +l d ++ e++++++++              e   +la++f    p++a++ 
  EPX72031.1 917 ELADNKKHEQSTSGSNRArkpayadrnqlkAEAGIMLASMFPGYTPDIAVKR 968
                 3333332222222222224444444444444445555555555555555544 PP

>> PX  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.4      0.79   1.1e+03      40     111 ..     341     410 ..     315     412 .. 0.71
   2 ?   -1.9   0.0       2.3   3.2e+03      45      92 ..     633     684 ..     626     701 .. 0.59
   3 !   73.9   0.3   6.7e-24   9.2e-21      15     112 ..     709     806 ..     694     807 .. 0.94
   4 ?    0.1   0.0      0.56   7.7e+02      32      56 ..     899     923 ..     888     950 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.79
                 EHHHHHHHHHHHHHHHT.TSTSTSSSTSGSSSSSCTTSHHHHHHHHHHHHHHHHHHHTSCHHHH.SHHHHHHHH CS
          PX  40 rYsdFeeLhskLlrkfp.rvkiPplPkkvlfgsvrkkdeefiekrrkgLeeyLqrllnhpelrn.sevlteFLe 111
                 +  +   + s+L++ +   ++   +++k++ +     + + ++kr+++L e  q+l +    +  ++++ eF e
  EPX72031.1 341 QLDQHTPFSSELQQYHErLRIALNITEKRISVL----SGSPFQKRQSTLVEQAQSLPQILSDSAaVSCFLEFME 410
                 445555577888888885556667777877765....8999999999998888877777777667777777766 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 2.3
                 HHHHHHHHHHHTTSTSTSSSTSGSSSSS....CTTSHHHHHHHHHHHHHHHH CS
          PX  45 eeLhskLlrkfprvkiPplPkkvlfgsv....rkkdeefiekrrkgLeeyLq 92 
                 +e+ ++L     ++k  +l + +   ++     +  e+ + +++++ ++yL 
  EPX72031.1 633 QEFENQLHALSTMMKKAELISDQKQLRNlfksYQAIEKAVSRKKRQVDQYLS 684
                 5555555555555554444444322222333345567777888888888886 PP

  == domain 3  score: 73.9 bits;  conditional E-value: 6.7e-24
                 TTSSEEEEEEEEEETTS...SSEEEEEEEHHHHHHHHHHHHHHHTTSTSTSSSTSGSSSSSCTTSHHHHHHHHHHHHHHHHHHHTSCHHHHSHHHHHHH CS
          PX  15 gskkhsyylyevelktg...akewtvkRrYsdFeeLhskLlrkfprvkiPplPkkvlfgsvrkkdeefiekrrkgLeeyLqrllnhpelrnsevlteFL 110
                 +++++ +y++++e+ +g   ++ w v RrY++F eLh++L++ fp+v+  ++P+k ++ s    +++++e r+ +L+eyLq+++++p  + s++l+ FL
  EPX72031.1 709 NEQEYAVYTIRIERLEGdviRSGWMVARRYREFAELHKQLKQMFPQVRFLKFPSKTVIPS---VTKSILEYRKIALKEYLQSIFQMPDVCDSKILRMFL 804
                 678999*********99*****************************************98...89********************************** PP

                 HS CS
          PX 111 ev 112
                 ++
  EPX72031.1 805 SQ 806
                 86 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 0.56
                 SSEEEEEEEHHHHHHHHHHHHHHHT CS
          PX  32 akewtvkRrYsdFeeLhskLlrkfp 56 
                 ++  +  R Y+  ++L+++L ++++
  EPX72031.1 899 SQWINQERIYEKVHQLRRELADNKK 923
                 466777899***********99987 PP

>> RGS  Regulator of G protein signaling domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.9   0.4   4.7e-20   6.4e-17       2     118 .]     392     529 ..     391     529 .. 0.95
   2 ?   -0.2   0.4      0.85   1.2e+03       6      42 ..     652     667 ..     622     719 .. 0.54

  Alignments for each domain:
  == domain 1  score: 61.9 bits;  conditional E-value: 4.7e-20
                 HHHHHTSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHTS.............SHHHHHHHHHHHHHHHHTSTTSTTSSTS-HHHHHHHHHHHCSS.... CS
         RGS   2 leslledqpgrslFreFlesefseenlsFwlaveefkka.............keqeelkkkakeIyneylapsspkelnidkklreelekrleke.... 83 
                 l ++l+d++ +s+F eF+e+++++  l+Fwl ve++k++             ++ ++  +++ +I + yl +  ++  n++++l++++ +++ ++    
  EPX72031.1 392 LPQILSDSAAVSCFLEFMERRKRSHFLHFWLVVEGLKESqddplnahmlapfSDISSDYTDFAAISKCYL-KRGENPFNLPDSLMNSIYSFIDQSensl 489
                 779**********************************************988788888888*********.778899********************** PP

                 .....STTTTTTHHHHHHHHHHHHHHHHHHHHTSHHHHHH CS
         RGS  84 .....qpsrklfeeaqeevfellekdsypkFlkselylrl 118
                         r+++ +aqe+vf+++++d+y +F++s++y r+
  EPX72031.1 490 sselwIDARSAMLAAQEHVFNVMHSDDYFEFVNSDIYYRF 529
                 ***99999*****************************986 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.85
                 HTSHH.HHHHHHHHHHHTTCTHHHHHHHHHHHHHTSSH CS
         RGS   6 ledqp.grslFreFlesefseenlsFwlaveefkkake 42 
                 ++dq+ +r+lF+++                      + 
  EPX72031.1 652 ISDQKqLRNLFKSY----------------------QA 667
                 22222233333333......................22 PP

>> Nexin_C  Sorting nexin C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.4   1.1e-07   0.00015       1     110 [.     872     975 ..     872     977 .. 0.68

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 1.1e-07
     Nexin_C   1 WlrrqaltvlkqvlqqllgdtierwlkekiekltseeavaslikklrdalWPdgeskaesaperseeekl.rtraearklLlellpdalvsvvGrknae 98 
                 W+ ++a     ++l+ql+g+++e+ ++ +++++ ++e++ + +++lr +l  +  ++++s    s + +  +   + r +L + +   l+s++   +  
  EPX72031.1 872 WMPKKAY---ISILEQLFGGALEKRIRTQLSQWINQERIYEKVHQLRRELADNK-KHEQS---TSGSNRArKPAYADRNQLKAEAGIMLASMFPGYTPD 963
                 6677766...99***************************************855.22222...222222212223334444446666666666666666 PP

     Nexin_C  99 ealkrifellQn 110
                  a+krif +lQn
  EPX72031.1 964 IAVKRIFRILQN 975
                 667777777776 PP

>> PilJ  Type IV pili methyl-accepting chemotaxis transducer N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   1.7   1.2e-05     0.017      38     106 ..     619     690 ..     609     696 .. 0.87

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.2e-05
        PilJ  38 ydaaearaqlretiaqfdrtlaalrlgdpapgllvpae...avraqleaveqlWqelkkpaeaalaqqddaa 106
                  + +ea ++l+  i++f+++l+al+   ++  l + ++   +  ++++a+e+  ++ k+++++ l+q++d +
  EPX72031.1 619 LQLSEAIQELQTDIQEFENQLHALSTMMKKAELISDQKqlrNLFKSYQAIEKAVSRKKRQVDQYLSQEEDSK 690
                 6789999********************99999999988999999*****************99999998854 PP

>> IATP  Mitochondrial ATPase inhibitor, IATP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.4   0.00034      0.47      49      88 ..     887     927 ..     878     933 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00034
        IATP  49 gdafgkrEaAsEeeyirqre.kekLaeLkeklaeqkeHlee 88 
                 g+a +kr + + ++ i q +  ek ++L+++la++k+H+++
  EPX72031.1 887 GGALEKRIRTQLSQWINQERiYEKVHQLRRELADNKKHEQS 927
                 8999**********99986637*****************97 PP

>> ApoLp-III  Apolipophorin-III precursor (apoLp-III)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.3     0.076     1e+02      63     113 ..     348     399 ..     341     403 .. 0.87
   2 ?   11.4   3.0   0.00019      0.26      55     122 ..     620     684 ..     604     692 .. 0.92

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.076
   ApoLp-III  63 vkkkieetadklseenPevkkkaqelqek.vQsgvqslvkesqklaeslken 113
                 + +++++  + l+ +   ++k ++ l+ + +Q++ ++lv+++q l + l+++
  EPX72031.1 348 FSSELQQYHERLRIALNITEKRISVLSGSpFQKRQSTLVEQAQSLPQILSDS 399
                 5678999999999999999*******9866*************998877765 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00019
   ApoLp-III  55 eleealkevkkkieetadklseenPevkkkaqelqekvQsgvqslvkesqklaeslkensqeakekla 122
                 +l ea++e++++i+e  ++l +  + + kka+  +   Q+++++l+k+ q++ ++++++++++ + l+
  EPX72031.1 620 QLSEAIQELQTDIQEFENQLHA-LSTMMKKAELISD--QKQLRNLFKSYQAIEKAVSRKKRQVDQYLS 684
                 5789*****************9.999*****99988..7889*********************99886 PP

>> O_anti_polymase  Putative O-antigen polymerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   4.9   0.00049      0.67      26     195 ..       4     258 ..       1     278 [. 0.70

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00049
  O_anti_polymase  26 lliilillglisfilgall........................................................................... 44 
                      +l++++++++  fi+ +++                                                                           
       EPX72031.1   4 NLKTYFFFAFCGFIVWIIFrsfiikviylwaagyfvwfhlhskhlgtynsfnsaepflvdptvfrkrsqnllksrfllrqalcpgypeiseele 97 
                      5566666666666655555556666666777777777777777788888888888888888888888888888888888888888777777766 PP

  O_anti_polymase  45 ..lsklvlsieellvknnkkkleikfn.ekkvekiglilvliGillfiinllivggiPlfdpslraklntkltalsylflpsiailva...... 129
                        l++++ +  ++ + +  ++  i ++ e++++k    l+l    + ++++li + +Pl+++ lr +++++  ++ +       ++ +      
       EPX72031.1  98 fiLENFMERYVKKWSSQIIGEPTIPNSiENHFRKCIHNLFLSVETVDFADILIKKILPLLTQHLRLFVEAEQLVVGH------KAVSFtdhsel 185
                      6533333333333333333333333330345566667777777778899********************99955544......33333344444 PP

  O_anti_polymase 130 ......kva.rlrnlilfiiglvllallgYrttvlaillsilitlYytkkikikeivllilllvllllgigyl 195
                            k++    ++++++ g  ++a   Y  +  + +lsi++ +Yy+ +  +  +++ i++ ++ll  i+y+
       EPX72031.1 186 skeiaaKYNnGSLHKAILLSGNPMVAQKKYLRNWTIQVLSIILPNYYQTSPLVISLITEIIINIVLLPLISYV 258
                      56776655505567777777888***************************99999999998888877777776 PP

>> Cep57_MT_bd  Centrosome microtubule-binding domain of Cep57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   2.7   0.00063      0.86       7      72 ..     615     680 ..     613     682 .. 0.93
   2 ?   -2.6   0.0       5.9   8.2e+03      30      42 ..     740     752 ..     739     755 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00063
  Cep57_MT_bd   7 qspkeaLaevlkeLedEfehlklelqelaaqynaldpslgkrkRkdLaeeleelvkrlEaKadqIy 72 
                  ++ + +L+e ++eL+ ++++   +l  l+ ++++ +  +++++ ++L ++ +++ k++ +K+ q+ 
   EPX72031.1 615 SPGDLQLSEAIQELQTDIQEFENQLHALSTMMKKAELISDQKQLRNLFKSYQAIEKAVSRKKRQVD 680
                  566789******************************999****9****************999985 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 5.9
  Cep57_MT_bd  30 elqelaaqynald 42 
                  e++el +q++++ 
   EPX72031.1 740 EFAELHKQLKQMF 752
                  6888999988885 PP

>> Yuri_gagarin  Yuri gagarin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.2      0.43   5.9e+02      62     105 ..     296     339 ..     275     395 .. 0.79
   2 ?   10.4   2.7   0.00032      0.44      58     130 ..     619     691 ..     586     724 .. 0.85
   3 ?    2.0   0.1      0.11   1.6e+02      19      74 ..     841     921 ..     835     949 .. 0.70

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.43
  Yuri_gagarin  62 ceidalketlkdrdeqikqlqsmitsysdlsennrlkeeiydlk 105
                    +i + +  lkd +   +q    i   s++s+  rl+ e+ + +
    EPX72031.1 296 SQIGTRRLGLKDSQYAFDQYIREIHRISNISDARRLRSELLVQR 339
                   5777778889999999999999999999999999*999986644 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00032
  Yuri_gagarin  58 erlaceidalketlkdrdeqikqlqsmitsysdlsennrlkeeiydlkqknceqarkvrelaeelkgeeeqrv 130
                    +l+  i++l++ +++ ++q++ l  m+++ + +s+ ++l++     +  +   +rk r++ + l +ee+ ++
    EPX72031.1 619 LQLSEAIQELQTDIQEFENQLHALSTMMKKAELISDQKQLRNLFKSYQAIEKAVSRKKRQVDQYLSQEEDSKL 691
                   589999****************************************999999*************99998764 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.11
  Yuri_gagarin  19 yneiydesstenpfcaavmdifeekseqeqkekef.........................lvanerlaceidalketlkdr 74 
                    ++  + ss   p c  ++++f  +++ +q+ +                            ++ er+  ++++l+ +l d 
    EPX72031.1 841 LSQADSTSSFSAPICEFLIELFSPNNDIKQQWMPKkayisileqlfggalekrirtqlsqWINQERIYEKVHQLRRELADN 921
                   555667789999999999999999998888765544556666666666666666666665445556666666666666654 PP

>> DUF4132  Domain of unknown function (DUF4132)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.19   2.7e+02      84     129 ..     587     633 ..     567     655 .. 0.81
   2 ?   -2.9   0.1       3.6   4.9e+03      19     138 ..     739     753 ..     735     756 .. 0.58
   3 ?    7.6   0.3    0.0022         3     122     160 ..     896     934 ..     879     949 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.19
     DUF4132  84 rafredgslvdlddeevelkedakvrlaHPvel.eaeelaawqella 129
                 ++fr d++l+d+d +    +++++v  a P +l  +e+++++q+ + 
  EPX72031.1 587 SSFRRDSTLNDVDLDGSISSDEEEVLFASPGDLqLSEAIQELQTDIQ 633
                 567889999999998888888889******99976777777777665 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 3.6
     DUF4132  19 kelkelkkelkeqasrqrarLeeamvsgrvwtaeewqelllehpvlgdlvrrLvwkvyeegeallrafredgslvdlddeevelkedakvrlaHPvele 117
                 +e++el+k+lk++                                                                                      
  EPX72031.1 739 REFAELHKQLKQMF------------------------------------------------------------------------------------- 752
                 45666666666654..................................................................................... PP

     DUF4132 118 aeelaawqelladyeivQpfk 138
                                     +
  EPX72031.1 753 --------------------P 753
                 ....................4 PP

  == domain 3  score: 7.6 bits;  conditional E-value: 0.0022
     DUF4132 122 aawqelladyeivQpfkQlfRevyvlteeereteeserf 160
                 +++++++ +++i  ++ Ql Re+   +++e++t+ s+r 
  EPX72031.1 896 TQLSQWINQERIYEKVHQLRRELADNKKHEQSTSGSNRA 934
                 67899***************************9999985 PP

>> Spectrin  Spectrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.1     0.062        85      30      67 ..     332     369 ..     311     397 .. 0.66
   2 ?   10.1   5.2   0.00063      0.87       2      65 ..     624     687 ..     623     696 .. 0.91
   3 ?   -1.3   0.2       2.2     3e+03      47      75 ..     898     926 ..     888     933 .. 0.62

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.062
                 SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Spectrin  30 gkdleevqallkkhkaleaelaaqqervkalnelaekl 67 
                  ++l   +++l++h+ +  el+++ er++    + ek 
  EPX72031.1 332 RSELLVQRRQLDQHTPFSSELQQYHERLRIALNITEKR 369
                 555555567899999999***99888887666544443 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00063
                 HHHHHHHHHHHHHHHHHHHHHHHCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Spectrin   2 llqqfaqdadeleeWieekeellssedlgkdleevqallkkhkaleaelaaqqervkalnelae 65 
                  +q+++ d++e+e+ +    +++++ +l +d  ++++l k ++a+e+ ++ ++++v++   ++e
  EPX72031.1 624 AIQELQTDIQEFENQLHALSTMMKKAELISDQKQLRNLFKSYQAIEKAVSRKKRQVDQYLSQEE 687
                 589******************************************************9885554 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 2.2
                 HHHHHHHHHHHHHHHHHHHHHHHTTHTTH CS
    Spectrin  47 eaelaaqqervkalnelaeklldeghsas 75 
                   +  +q++  +++ +l ++l+d++++++
  EPX72031.1 898 LSQWINQERIYEKVHQLRRELADNKKHEQ 926
                 44555666667777777777766665544 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   2.2    0.0032       4.5      12      73 ..     620     683 ..     617     705 .. 0.66
   2 ?   -0.4   0.0       1.3   1.8e+03       7      35 ..     738     766 ..     735     797 .. 0.77
   3 ?    0.4   0.2      0.73     1e+03      29      63 ..     896     929 ..     879     945 .. 0.64

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0032
                 HHHHHHHHHHHHHHHHHHHHHHH..HHHHHHHHHHHHHHHHHHXXXXXXXXXXXXXXXXXXXXX CS
        YabA  12 eleeqleelleeleelkeelael..leenaeLeleneklrerleeeekkekekkkelsegkenL 73 
                 +l+e ++el+++++e +++l++l  + + aeL  ++++lr+++++ ++ ek+ ++++++  + L
  EPX72031.1 620 QLSEAIQELQTDIQEFENQLHALstMMKKAELISDQKQLRNLFKSYQAIEKAVSRKKRQVDQYL 683
                 5778888888888888887775422667889999999999999444444443333333333333 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 1.3
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        YabA   7 fdkleeleeqleelleeleelkeelaell 35 
                 +++++el++ql+++  +++ lk   ++++
  EPX72031.1 738 YREFAELHKQLKQMFPQVRFLKFPSKTVI 766
                 56789999999999999999887666665 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.73
                 HHHHHHHHHHHHHHHHHHHHHHHHXXXXXXXXXXX CS
        YabA  29 eelaelleenaeLeleneklrerleeeekkekekk 63 
                 ++l++ +++ +++    ++lr++l++++k+e++++
  EPX72031.1 896 TQLSQWINQ-ERIYEKVHQLRRELADNKKHEQSTS 929
                 444444443.4555667888888855555444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1005 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1586  (0.08846); expected 358.6 (0.02)
Passed bias filter:                      707  (0.0394333); expected 358.6 (0.02)
Passed Vit filter:                       105  (0.00585643); expected 17.9 (0.001)
Passed Fwd filter:                        20  (0.00111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.90u 0.31s 00:00:01.21 Elapsed: 00:00:00.46
# Mc/sec: 6607.29
//
Query:       EPX72032.1  [L=129]
Description: hypothetical protein SOCG_06206 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0013   17.9   0.0     0.0015   17.8   0.0    1.0  1  Sre       C. elegans Sre G protein-coupled chemoreceptor
     0.0092   15.3   0.0       0.01   15.1   0.0    1.0  1  SLAC1     Voltage-dependent anion channel
  ------ inclusion threshold ------
      0.015   15.4   0.0      0.019   15.1   0.0    1.1  1  DUF3278   Protein of unknown function (DUF3278)


Domain annotation for each model (and alignments):
>> Sre  C. elegans Sre G protein-coupled chemoreceptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   2.4e-07    0.0015      24     103 ..      21      96 ..       3     118 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 2.4e-07
         Sre  24 faqlllsivelllyiltayivvvslkvilkirlFHkNllilfiplfviwfeliigklitiayelklvileevelgeliqf 103
                 + q +  + + ++   + +i + ++ ++l+i l +  + +l i +++  +  +++ +i i++++  ++l+ +e    ++ 
  EPX72032.1  21 VSQEVAHYNSKMFISCCSLICICLINILLSITLKYHKQPNLLILFYFTSYVSWLAAYIYIYFKNRPFRLPRKE----KET 96 
                 567778888889999999999999999****998888888888999999******************999888....222 PP

>> SLAC1  Voltage-dependent anion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   1.7e-06      0.01      59     121 ..      19      82 ..       7     105 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.7e-06
       SLAC1  59 eavrkelrhpveslflgtfpmglltilnglllvl.pgewlatlalvllWi.gvllslltavvvvf 121
                 e+v +e+ h +  +f++++++ ++ ++n+ll ++ + ++  +l++  +++ +++  l+  ++++f
  EPX72032.1  19 EKVSQEVAHYNSKMFISCCSLICICLINILLSITlKYHKQPNLLIL-FYFtSYVSWLAAYIYIYF 82 
                 5899*****99************99999999999888777778888.775255555555555544 PP

>> DUF3278  Protein of unknown function (DUF3278)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   0.0   3.1e-06     0.019      28     106 ..      23     102 ..      12     108 .. 0.69

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 3.1e-06
     DUF3278  28 qeinrignnafillwlyl..lilslvalllakktpeselilglvltnlllvvlvsglYiliaskklglatkeveakdyeka 106
                 qe+    +++fi   + +   +++++ ++  k +++ +l+  l ++ + +++l++ +Yi  + +  +l  ke e+ +  k+
  EPX72032.1  23 QEVAHYNSKMFISCCSLIciCLINILLSITLKYHKQPNLL-ILFYFTSYVSWLAAYIYIYFKNRPFRLPRKEKETDESRKQ 102
                 6677777777775544330034455555555566665555.677888999******************9998887776554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1509  (0.0841653); expected 358.6 (0.02)
Passed bias filter:                      678  (0.0378158); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 986.31
//
Query:       EPX72033.1  [L=125]
Description: hypothetical protein SOCG_03965 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       531  (0.0296168); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.44
# Mc/sec: 859.05
//
Query:       EPX72034.1  [L=142]
Description: U4/U6 X U5 tri-snRNP complex subunit Dim1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.6e-67  224.7   0.4    2.9e-67  224.5   0.4    1.0  1  DIM1         Mitosis protein DIM1
     0.0033   17.4   0.0     0.0041   17.1   0.0    1.1  1  Thioredoxin  Thioredoxin
  ------ inclusion threshold ------
       0.13   12.3   0.0       0.17   11.8   0.0    1.3  1  DUF3192      Protein of unknown function (DUF3192)


Domain annotation for each model (and alignments):
>> DIM1  Mitosis protein DIM1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  224.5   0.4   4.8e-71   2.9e-67       1     133 []       4     136 ..       4     136 .. 0.99

  Alignments for each domain:
  == domain 1  score: 224.5 bits;  conditional E-value: 4.8e-71
                 TS-EE-SHHHHHHHHHH-SSSEEEEEEE-TT-HHHHHHHHHHHHHHHHTTTTEEEEEEETTT--TTSCCCTT-SSSEEEEEETTEEEEEE-SSS--SSB CS
        DIM1   1 llpkLetkeevdqailseeerlvviRFGrdedaeClklDelLakiaeklknfaviylvdidevpdfnkmyeledpvtilffyrnkhmkvDfgtgdnnKl 99 
                 +lp+L+++++vdqailse+erlvviRFGrd+d+eC+k+De+L++iaek+ n+av+ylvdidevpdfnkmyel+d +ti+ffyrnkhm++D+gtg+nnK+
  EPX72034.1   4 FLPHLHSGWHVDQAILSEQERLVVIRFGRDHDEECMKQDEVLYRIAEKVVNMAVFYLVDIDEVPDFNKMYELYDRSTIMFFYRNKHMMIDLGTGNNNKI 102
                 69************************************************************************************************* PP

                 -S----HHHHHHHHHHHHHHHHHT-SEEE-SS-T CS
        DIM1 100 nfvledkqelidiietiyrgakkgkglvvspidy 133
                 n++ledk+e+idiiet++rga+kgkglv+sp+dy
  EPX72034.1 103 NWALEDKHEMIDIIETVFRGARKGKGLVISPKDY 136
                 ********************************97 PP

>> Thioredoxin  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   6.9e-07    0.0041      13      95 ..      18     100 ..      10     108 .. 0.84

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 6.9e-07
                  HHTTTSSEEEEEEE-TTSHHHHCHHHHHHHHHHHCTTTSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTEEEEEEESS-HHH CS
  Thioredoxin  13 evakekklvlveFyApwCghCkalaPeleklaeelkdkvklakvdvdenedlakkyevegiPtlklfkngkevkkyegareke 95 
                   ++++++lv++ F  +    C +   +l ++ae++ +  +++ vd+de +d  k ye     t+++f  +k++    g+ +++
   EPX72034.1  18 ILSEQERLVVIRFGRDHDEECMKQDEVLYRIAEKVVNMAVFYLVDIDEVPDFNKMYELYDRSTIMFFYRNKHMMIDLGTGNNN 100
                  45668999**********************************************************99988554444443334 PP

>> DUF3192  Protein of unknown function (DUF3192)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.9e-05      0.17      40      79 ..      60      99 ..      24     116 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.9e-05
     DUF3192 40 vlellGsaDfseakkkkdkevqvlfYRTqrkksDgkTTkd 79
                 +++   +Df+++++  d++  ++fYR +++  D  T ++
  EPX72034.1 60 LVDIDEVPDFNKMYELYDRSTIMFFYRNKHMMIDLGTGNN 99
                55555679**********************9999777666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       481  (0.026828); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 1107.75
//
Query:       EPX72035.1  [L=516]
Description: pig-B [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   4.4e-101  339.1  35.7   5.1e-101  338.9  35.7    1.0  1  Glyco_transf_22  Alg9-like mannosyltransferase family


Domain annotation for each model (and alignments):
>> Glyco_transf_22  Alg9-like mannosyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  338.9  35.7  2.9e-105  5.1e-101       1     417 []       4     413 ..       4     413 .. 0.92

  Alignments for each domain:
  == domain 1  score: 338.9 bits;  conditional E-value: 2.9e-105
  Glyco_transf_22   1 wifllllalrlllalltqtsfdpDEffqslEvahklvfgkgtltWEyspkygiRSylfllllalpyrllaelvadskiav.lyapRlllallsa 93 
                      w++++++a+r+++al+++t+f+pDEf+qslEvah+lvfg+g+ltWE+  + +iRS l++l++a++y ll++l+ ds++ v l apR+l++++sa
       EPX72035.1   4 WMWFVVFAFRWWNALWVKTFFQPDEFYQSLEVAHHLVFGYGFLTWEW--RNSIRSGLHPLIFACLYQLLKLLGWDSNYTVmLSAPRILQGTFSA 95 
                      89*********************************************..*****************************996889********** PP

  Glyco_transf_22  94 lidyylfravcrkygseiakialllslsswglfvfstrtfsnslemlltsialyllsellsrenksss.......nekylvavlliavlavliR 180
                      ++dy +++++  +ygs+ a+++l++sl+s++++++++rtf nsle+++t +al ++++++   ++ +        + + l+++++i  +a+liR
       EPX72035.1  96 ILDYATYQFALHRYGSRAARWTLVCSLFSFFNAFVGVRTFANSLETTMTALALWQWQKYMRLVSHTQVktdhnptAFRALLWFITIIGIAFLIR 189
                      **********************************************************996544444468999998899*************** PP

  Glyco_transf_22 181 ptsallwlplvlf..............lllrlvkkrsktflfliialvllvlllvlvlviliDslfYgkfvftplnflkyNvlsnlsslyGvhP 260
                      pt++l+w+++vl                l r+++ +++++ ++ +a++ +v + +l+ ++l+D++ Yg+fvf++++f+ +Nv+s lsslyGv++
       EPX72035.1 190 PTNLLIWVVPVLLwtaspkapflrpslILARVRQLFWEVL-NHPFAITAVV-STILIFNVLVDRYVYGRFVFPIISFFNFNVTSGLSSLYGVNS 281
                      ***********************99766666666666666.7777776554.445788************************************ PP

  Glyco_transf_22 261 wyfYllqnlpnilgvlllavllgllvllsrkvsrlllllltilltLlvysllpHKElRFllpvlPlillsaavlltrlsresakvskklsllvl 354
                       ++Yl+q++p+i+g  +++++l +  +          ++ ++  +Ll ys++ HKE+RF++p+ P++l   + +l+++s  ++++++     vl
       EPX72035.1 282 AHYYLSQAIPLICGGYIIFLFLSFDLQ----------AVFAVGFVLLPYSFISHKEFRFVYPLSPILLSAIGNGLASVS-SKWIRRGF----VL 360
                      *****************9999877777..........67888999*********************************7.66666655....99 PP

  Glyco_transf_22 355 lllfnvvlalllglvhqagvillvevmseleetkrknrkekketssvyvlkecyrtPsssylh 417
                      +  +++ +a++l+ +hq g+    +vm+ +++ + +n+       +  +l++c++tP++s++h
       EPX72035.1 361 ISCVHIGVAIILCRFHQLGSA---DVMPLIHSLAAQNK-------TGIILAPCHTTPWQSHIH 413
                      9********************...*********96655.......33479***********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (516 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       650  (0.0362541); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 3560.30
//
Query:       EPX72036.1  [L=173]
Description: ubiquinone binding protein Coq10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.5e-24   86.6   0.0    1.8e-24   86.4   0.0    1.1  1  Polyketide_cyc   Polyketide cyclase / dehydrase and lipid tra
     0.0049   17.1   0.0     0.0061   16.8   0.0    1.1  1  Polyketide_cyc2  Polyketide cyclase / dehydrase and lipid tra
  ------ inclusion threshold ------
       0.16   11.4   0.0       0.27   10.7   0.0    1.3  1  LINES_C          Lines C-terminus


Domain annotation for each model (and alignments):
>> Polyketide_cyc  Polyketide cyclase / dehydrase and lipid transport
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.4   0.0   3.1e-28   1.8e-24       1     129 [.      19     148 ..      19     149 .. 0.94

  Alignments for each domain:
  == domain 1  score: 86.4 bits;  conditional E-value: 3.1e-28
                     ESS-HHHHHHHHTTTGGCCSCCCCEEEEEE.SSSEE....E....EEECSTTSSCEEEEEEEEEEETTT..EEECTTCCCCCEEEEEEEECTECC CS
  Polyketide_cyc   1 vpapadqvyalvadvesypeflphcssvevleeaes.glsa....dlevgfggltesftarvtldppee..itfklvegdfkslegkWtieslpp 88 
                     +p+ ++ +++lv+d++ y +f+p+c+++++++++ + g       dl++gfg + e+f++rv++dp e+  ++    +++f++l+++W+i++ + 
      EPX72036.1  19 MPYKPSFLFRLVSDIDEYERFVPFCQKSKITSRDLTtG--LpnkaDLTIGFGSFCETFDSRVVCDPVERtvLADASHHRLFQYLKTNWKIAEAS- 110
                     799********************************742..33577**************************999999*****************. PP

                     EEECEEEEEEEEEEEE-SSCHHHHHHHHHHHHHHHHHHHHH CS
  Polyketide_cyc  89 nsggtrtkvalevdfkfaspllgalvgqvaervldellaal 129
                          r++v lev+f+fas+l  ++ ++++ +v+ e+++ +
      EPX72036.1 111 ---KGRVRVDLEVEFEFASKLHSVVSKMAGSTVATEIIQGF 148
                     ...899****************************9999877 PP

>> Polyketide_cyc2  Polyketide cyclase / dehydrase and lipid transport
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0     1e-06    0.0061       6     132 ..      15     150 ..      11     157 .. 0.67

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 1e-06
                      EEEEESS-HHHHHHHHTTTTGGGGT-TTEEEEECSESTSSS..TTTEEEEECCCSSEEEEEEEEE...ETTTTEEEEEEE.SSS-TSE.EEEEE CS
  Polyketide_cyc2   6 vsvviaappekVwalvsdfenwprWhpevarveleggggpa..rgvegtvrvggrgtvreelvev...dpegrllsyrivkpvpvany.vatwt 93 
                      +s+  +  p   ++lvsd +++ r  p+ +++++++++ ++    +   ++ g+ g   e++  +   dp +r++  ++ + +++++y +++w+
       EPX72036.1  15 ASKLMPYKPSFLFRLVSDIDEYERFVPFCQKSKITSRDLTTglPNK-ADLTIGF-GSFCETFDSRvvcDPVERTVLADA-SHHRLFQYlKTNWK 105
                      5666666778889*****************9998874444344344.6666666.555555554444499888888888.4799999*7777** PP

                      EEECCET.EEEEEEEEEEE.....E--TT--HHHHHHHHHHHHHH CS
  Polyketide_cyc2  94 vtpdggg.trvtwtgefda.....gplggpfekpaaakavkgdle 132
                      ++++  g  rv  ++ef++     + + +++  ++a + ++g+++
       EPX72036.1 106 IAEASKGrVRVDLEVEFEFasklhSVVSKMAGSTVATEIIQGFVD 150
                      *****8878888888888763333333344444444444444444 PP

>> LINES_C  Lines C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   4.5e-05      0.27      19      36 ..      17      34 ..      14      35 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 4.5e-05
     LINES_C 19 nLFPYNpspLLklLekvE 36
                +L PY ps L +l + ++
  EPX72036.1 17 KLMPYKPSFLFRLVSDID 34
                89***********99887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       470  (0.0262145); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 1215.71
//
Query:       EPX72037.1  [L=538]
Description: sorting nexin Atg20 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-19   70.4   0.0    3.6e-19   68.8   0.0    1.8  1  PX             PX domain
  ------ inclusion threshold ------
       0.09   13.2   1.4        1.5    9.3   0.4    2.7  2  HsbA           Hydrophobic surface binding protein A
       0.16   12.2   0.5       0.52   10.6   0.1    2.1  2  SRP54_N        SRP54-type protein, helical bundle domain
       0.18   11.8   0.1       0.46   10.5   0.1    1.6  1  Hydrophobin_2  Fungal hydrophobin


Domain annotation for each model (and alignments):
>> PX  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.8   0.0   8.1e-23   3.6e-19       6     113 .]      35     139 ..      28     139 .. 0.91

  Alignments for each domain:
  == domain 1  score: 68.8 bits;  conditional E-value: 8.1e-23
                 EEEEEEEEETTSSEEEEEEEEEETTSSSEEEEEEEHHHHHHHHHHHHHHHTTSTSTSSSTSGSSSSS......CTTSHHHHHHHHHHHHHHHHHHHTSC CS
          PX   6 vsvleretsgskkhsyylyevelktgakewtvkRrYsdFeeLhskLlrkfprvkiPplPkkvlfgsv......rkkdeefiekrrkgLeeyLqrllnhp 98 
                 vs+       s+++sy+ yev +k     ++v+RrYsdFe+L + + r++p+ ++Pp+P+k+++ s+       k+d +f+  r ++Le +L++++ hp
  EPX72037.1  35 VST-----VTSSDGSYVEYEVAHKK----RSVWRRYSDFESLVKLMHRRYPAAIVPPIPGKQSLLSYaknprkAKNDADFLGFRSRMLELFLRQCFLHP 124
                 333.....348999*********96....6**********************************999******9************************* PP

                 HHHHSHHHHHHHHSS CS
          PX  99 elrnsevlteFLevs 113
                  +r ++++ +F+++s
  EPX72037.1 125 LIRVDSDFDKFINSS 139
                 ***********9875 PP

>> HsbA  Hydrophobic surface binding protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.071   3.2e+02      72     104 ..     299     331 ..     232     339 .. 0.70
   2 ?    9.3   0.4   0.00033       1.5      18      87 ..     443     515 ..     438     522 .. 0.80

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.071
                 HCHHHHHHHHHHHHHTHHHHHHHT-HHHHHHHH CS
        HsbA  72 tLepdvkaaldaliaKkpafdkagltslvlssL 104
                 +L p++ ++l+ + +  + + k+g +   l+ L
  EPX72037.1 299 NLSPSIHSTLNGISKMESSLSKLGSAFHSLTAL 331
                 699999999999999999998888655555555 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00033
                 HHHHHHH-.-S.H...HHHHHHHHHHHHHHHHHHHHHHHTS----HHHHHHHHHHHH.HCHHHHHHHHHHHHHT CS
        HsbA  18 ldtavnaf.nG.g.asalpilsasnalvsaikkattdaqasapltdeealalaqavq.tLepdvkaaldaliaK 87 
                 l++a+  f +G + +s  ++++ + ++++ ++ a++d+q+ + l dee l++  a+q t  +++ +a+ a i+K
  EPX72037.1 443 LQNAIYDFvDGeTsISKETLQEHTKTIENQLNVANQDCQTIDKLIDEE-LEFYKACQsTQLKEIVNAVHASISK 515
                 8899999966686788899************************99888.7788888766555555555555555 PP

>> SRP54_N  SRP54-type protein, helical bundle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0         2   8.9e+03      48      63 ..     358     372 ..     353     382 .. 0.47
   2 ?   10.6   0.1   0.00012      0.52       3      50 ..     441     489 ..     439     512 .. 0.80

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 2
                 HHHHHHHHHCTTSS-H CS
     SRP54_N  48 ienvkkkavgekklkp 63 
                  +++   av ek +++
  EPX72037.1 358 EQEFNS-AVYEKLIQS 372
                 444422.444444444 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00012
                 HHHHHHH.HHHCCSSCGHHHHHHHHHHHHHHHHHHTT--HHHHHHHHHH CS
     SRP54_N   3 kklnsal.kklsgkskideedleealkeleeaLleaDVgvkvvkklien 50 
                 ++l++a+   + g ++i++e+l+e  k +e++L  a+   ++ +kli++
  EPX72037.1 441 GRLQNAIyDFVDGETSISKETLQEHTKTIENQLNVANQDCQTIDKLIDE 489
                 5777777344455678******************************996 PP

>> Hydrophobin_2  Fungal hydrophobin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.1    0.0001      0.46      17      44 ..     473     500 ..     466     504 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.0001
  Hydrophobin_2  17 lgvadldCatpsktptsaaefkaiCaas 44 
                    l+va+ dC+t  k +++  ef+++C+++
     EPX72037.1 473 LNVANQDCQTIDKLIDEELEFYKACQST 500
                    89***********************876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (538 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1468  (0.0818785); expected 358.6 (0.02)
Passed bias filter:                      606  (0.0338); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.62u 0.28s 00:00:00.90 Elapsed: 00:00:00.45
# Mc/sec: 3589.08
//
Query:       EPX72038.1  [L=210]
Description: TIM23 translocase complex subunit Tim23 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.6e-25   88.5   4.8      5e-25   88.0   4.8    1.1  1  Tim17     Tim17/Tim22/Tim23/Pmp24 family


Domain annotation for each model (and alignments):
>> Tim17  Tim17/Tim22/Tim23/Pmp24 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.0   4.8   2.8e-29     5e-25       2     108 ..      84     192 ..      83     195 .. 0.95

  Alignments for each domain:
  == domain 1  score: 88.0 bits;  conditional E-value: 2.8e-29
       Tim17   2 vyktglsgvlGallGavfglvkgsrradtpapskerlreglrsvgkrgpslGknfgvvgglysgiecaleklRgkediwnsvaAGaltGallr..agpq 98 
                 +y tg+s++ G+++G+++g+ +g++++ +  ++++rl+ +l+ +++rgp++G+++gv++++y+gi++ + + R+k+ + nsvaAGa+tGal++   g++
  EPX72038.1  84 CYGTGTSYLTGLAVGGAWGFNEGLKKTRDITSTRLRLNGVLNGITRRGPFVGNSLGVLAIVYNGINSFIGYKREKHSWENSVAAGAITGALYKstRGVR 182
                 899**************************9***********************************************77*************77899** PP

       Tim17  99 aaavgaigga 108
                 a+a+++ ++a
  EPX72038.1 183 AMAISSTLVA 192
                 ***9988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       551  (0.0307323); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 1428.74
//
Query:       EPX72039.1  [L=129]
Description: cytochrome b5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-23   83.3   0.1    1.4e-23   82.8   0.1    1.2  1  Cyt-b5    Cytochrome b5-like Heme/Steroid binding domain


Domain annotation for each model (and alignments):
>> Cyt-b5  Cytochrome b5-like Heme/Steroid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.8   0.1     8e-28   1.4e-23       2      73 ..       8      78 ..       7      79 .. 0.97

  Alignments for each domain:
  == domain 1  score: 82.8 bits;  conditional E-value: 8e-28
                HHHHTTTECTTEEEEEETTEEEECTTTCCCSTTCSHHHHTTTTSBBHHHHHHTTGGCHHHHHHHHGGEEEEE CS
      Cyt-b5  2 leelskhngkndlwvairgkVYDvskflskhpGgesailkyaGkDateafksvvhsekdaekllkkylvGkl 73
                 ee+ khn+ +dlw++++++V+D+skf++ hpGge+++ ++aG+Da+  f++v hse+ a+++l+k++vGkl
  EPX72039.1  8 VEEVLKHNTREDLWIVVKDEVFDISKFIEAHPGGEEVLVDLAGHDASGPFEDVGHSED-AQDMLRKFYVGKL 78
                69***************************************************99999.8**********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       545  (0.0303977); expected 358.6 (0.02)
Passed bias filter:                      471  (0.0262703); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.27s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 939.60
//
Query:       EPX72040.1  [L=115]
Description: ribosomal protein subunit L31 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      9e-41  138.4   0.4      1e-40  138.3   0.4    1.0  1  L31       Mitochondrial ribosomal protein L31


Domain annotation for each model (and alignments):
>> L31  Mitochondrial ribosomal protein L31
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.3   0.4   5.7e-45     1e-40       3     102 .]      11     115 .]       9     115 .] 0.98

  Alignments for each domain:
  == domain 1  score: 138.3 bits;  conditional E-value: 5.7e-45
         L31   3 llgGllwKipwrlsktqkarqrkRlkavDevieavkeslkkkgvslkalekakaelpkesemspkdKYtvFskksk.....gYRKsihkvpkwtklslr 96 
                 ++gGl++K pwrls+++k+r+r+Rl++vD+v+++++++l+k++ s++a+e+  a+ p+esem+pkdKYtvF++k++     g+RKsihkvpkwtk+++r
  EPX72040.1  11 RFGGLVKKDPWRLSHNRKYRLRQRLRDVDQVVDVLRSALSKQNESVHAIENFVATNPRESEMTPKDKYTVFTRKTQgagpgGFRKSIHKVPKWTKITHR 109
                 68*************************************************************************9999999***************** PP

         L31  97 enpkgf 102
                 +np+gf
  EPX72040.1 110 TNPEGF 115
                 ****98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       808  (0.0450667); expected 358.6 (0.02)
Passed bias filter:                      669  (0.0373138); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 809.50
//
Query:       EPX72041.1  [L=842]
Description: ubiquitin carboxy terminal hydrolase Ubp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-66  223.2   3.4    5.1e-66  222.8   3.4    1.2  1  UCH       Ubiquitin carboxyl-terminal hydrolase
    5.9e-18   65.3   1.7    1.1e-17   64.4   0.1    2.4  2  DUSP      DUSP domain
    1.1e-11   45.0   2.2    0.00014   21.6   0.0    3.8  3  UCH_1     Ubiquitin carboxyl-terminal hydrolase


Domain annotation for each model (and alignments):
>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  222.8   3.4   8.6e-70   5.1e-66       1     257 []     273     839 ..     273     839 .. 0.96

  Alignments for each domain:
  == domain 1  score: 222.8 bits;  conditional E-value: 8.6e-70
                 -EES-SSSTHHHHHHHHHHHTSHHHHHHHHTCHHCCSSTCCCCC-.TT.TTS.TTHHHHHHHHHHHHHH..SH-CCEE--HHHHHHHHHHSGGGTSSST CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH   1 tGlsNlGntCymnsvlQcLfsipelrdyllsleevkkesrnkkelnesnplgkkgelakalkdlfkell..kskskavsPkklkktlsklaksfsgykq 97 
                 +G++N+GntCymns+lQcLf+++el++y+l+       +r+k+e+n +nplg+kg++a a+++l+k+ +  +    ++sP++lk ++s++++sf+gy+q
  EPX72041.1 273 CGMNNIGNTCYMNSALQCLFHTRELSEYFLY-------DRHKEEINFANPLGMKGKVALAYANLIKQANknGIFGPSISPHTLKYIISEFNSSFAGYSQ 364
                 7******************************.......9****************************9976334569********************** PP

                 CEHHHHHHHHHHHHHHHHCC.....................HCCCHHHHHHCCCTTSHHHHHH-EEEEE.............................. CS
                 xxxxxxxxxxxxxxxxxxxx.....................xxxxxxxxxxxxxxxxxxxxxxxxxxxx.............................. RF
         UCH  98 qDaqEflaflLdqlhedlnr.....................evaeekwkkhlkrndslitdlfegqlks.............................. 145
                 +D+qEf+af Ld+lhedlnr                     +v +e+wk+  krnds++++lf+g++ks                              
  EPX72041.1 365 NDSQEFIAFFLDGLHEDLNRvidkpyfdrpdlytenraqvqKVGDECWKMYAKRNDSVVVELFQGMYKStlrcsacdlksvvfdpfmyltlplptvtkw 463
                 *****************************************99******************************************************** PP

                 ................................................................................................... CS
                 ................................................................................................... RF
         UCH 146 ................................................................................................... 145
                                                                                                                    
  EPX72041.1 464 rhtvnfvpmsenvspvkftieipsdytvqeaqcyailrlqqlgyrtesvkamdiydgkvykcleehrkiskmihsydrlfmyetmrekivtpvvhcksl 562
                 *************************************************************************************************** PP

                 ................................................................................................... CS
                 ................................................................................................... RF
         UCH 146 ................................................................................................... 145
                                                                                                                    
  EPX72041.1 563 pqmpgsfqrcdpfgyplqlsfsenyvtkkelynrinklyrtytdisitpnmfqiyvqtlpfgldvwnrlkdyenyeytpvdeegvylskqtiimciwne 661
                 *************************************************************************************************** PP

                 ..........................................................EEEEEEB-SEEEEEEESEEETEE...EEE--SEEB--S.EE CS
                 ..........................................................xxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxx.xx RF
         UCH 146 ..........................................................klklkrlPeiLiihlkRfsynss...ksKlntkvefpe.el 182
                                                                           ++++++lP+ Liihl+Rfs + +    +K ++ v+fp   l
  EPX72041.1 662 dnqrkvfvknnwyfdgqqyhlnsitlqdcleefsrpeqlsledswycpsckdfraatkQMEIWKLPRNLIIHLNRFSCTGRirrLRKRRDYVSFPTvAL 760
                 ******************************************************************************88888899*********8889 PP

                 E-GGGBSS....-BTTS-TCS-BEEEEEEEEEESCTTSEEEEEEEECTTTTEEEEEETTEEEEE-HHCCCTT.CEEEEEE CS
                 xxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxx RF
         UCH 183 dlssylae....ekkkkteekkkYeLiavvvHsGslssGHYvayiknekngkWykydDetvkevkeeeevls.sayiLfY 257
                 d+++y++     ++k+ ++++ +YeL+a+ +H+G + + HY++y+k+ ++g++++ydD  v+++++e ++ + +ay+Lf+
  EPX72041.1 761 DMKPYISPlrelKEKETESRSHTYELYAIDNHHGYMINSHYTSYVKDISSGSFLNYDDAYVEKIEDE-AIITaAAYVLFF 839
                 99977654111144444455566******************************************88.77778******7 PP

>> DUSP  DUSP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.4   0.1   1.8e-21   1.1e-17       2      91 ..      44     120 ..      43     121 .. 0.96
   2 ?   -2.4   0.2       1.3   7.6e+03      12      28 ..     628     662 ..     626     712 .. 0.48

  Alignments for each domain:
  == domain 1  score: 64.4 bits;  conditional E-value: 1.8e-21
                 -EEEEEEHHHHHHHHHHHTTSTTSTTTTCGCS--SB-CGGGB.......TTTEB-SS--BTTTEEEEEHHHHHHHHHHC-.T----EEEEE CS
        DUSP   2 qkyyliskkWleqwksyvsydavteekesgskpgpIdnsdllkappltkengrlkpnlqegrdyeivpeevwkfLvqwYg.ggpeikrkvi 91 
                 + +yli+++W+e +k+++        + ++ +pgpId ++ll      ++n +l p l+e+ dy+i++ +vw++L qw+g  g +i+rkvi
  EPX72041.1  44 DSAYLIEYEWFEAYKDFL--------NGESRHPGPIDQKKLL------DKNHQLLPGLEESIDYTIISSSVWHKLAQWFGvHGLPIERKVI 120
                 679***************........999999**********......79***************************************98 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.3
                 HHHHHHHHTTSTTSTT..................T CS
        DUSP  12 leqwksyvsydavtee..................k 28 
                 +++ k+y +y+   ++                  +
  EPX72041.1 628 WNRLKDYENYEYTPVDeegvylskqtiimciwneD 662
                 55566666554444444455444444444444331 PP

>> UCH_1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.08   4.8e+02     205     251 ..     168     214 ..     162     264 .. 0.80
   2 !   21.6   0.0   2.4e-08   0.00014       2     166 ..     274     458 ..     273     494 .. 0.75
   3 !   17.4   0.3   4.5e-07    0.0027     142     297 ..     654     806 ..     577     821 .. 0.74

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.08
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 205 pteqrktvknlPpvLalnakleeeeelelwktknwlpleiklslded 251
                 ++++++t+knl +++ +n ++  +++++lw++ + lp+   + +++ 
  EPX72041.1 168 HFSKTQTLKNLIEFIRVNFNIPVSTKYRLWHNARLLPSGRFIPISDA 214
                 678999***************97777******888887655555554 PP

  == domain 2  score: 21.6 bits;  conditional E-value: 2.4e-08
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1   2 GLEnhivnsYlNslLQvlyfipplrnlalshlakeckkehcLlcElgflfdmldkakglncqasnFlrals......sipeasalglileeeeetekss 94 
                 G+ n  +++Y+Ns LQ+l+++ +l++  l       k+e   +  lg+         +      n+ ++ +       + + ++l+ i +e ++   s 
  EPX72041.1 274 GMNNIGNTCYMNSALQCLFHTRELSEYFLYDR---HKEEINFANPLGMKG-------KVALAYANLIKQANkngifgPSISPHTLKYIISEFNS---SF 359
                 899999*******************9888887...677766666666433.......2333333333333322222233345899999887433...33 PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...........................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1  95 aislssliqsfnrflldqlekelketkkns...........................seeesaieqllgtkaettirclkCgseksrksstlvldlkyP 166
                 a   ++  q+f  f+ld l+++l++  +++                           ++++s + +l++  +++t+rc+ C  +++  + ++ l l  P
  EPX72041.1 360 AGYSQNDSQEFIAFFLDGLHEDLNRVIDKPyfdrpdlytenraqvqkvgdecwkmyaKRNDSVVVELFQGMYKSTLRCSACDLKSVVFDPFMYLTLPLP 458
                 4444555678***************99888***************************999999999****************99988888888777443 PP

  == domain 3  score: 17.4 bits;  conditional E-value: 4.5e-07
                 xxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxx RF
       UCH_1 142 tirclkCgseksrksstlvldlkyP..kpsnekkeakvtfasilksslerektt...rawCekCkryqpteqrktvknlPpvLalnakleee.eelelw 234
                  i c+   +e++++++++ ++  y   ++    + ++ t++++l+++   e+ +      C++Ck +   +++  + +lP+ L++++++++     + +
  EPX72041.1 654 IIMCI--WNEDNQRKVFVKNNW-YFdgQQ---YHLNSITLQDCLEEFSRPEQLSledSWYCPSCKDFRAATKQMEIWKLPRNLIIHLNRFSCtGRIRRL 746
                 44444..334444444444444.521332...4567788888888888887654442667****************************99553344445 PP

                 xxx.xxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 235 ktk.nwlp.leiklsldedknleeklkeerekakaekeikvYeLqsvvvhigdskesghLvslvk 297
                 +++ ++++ + ++l++++      +  +e +++++e+++ +YeL ++  h g    ++h+ s+vk
  EPX72041.1 747 RKRrDYVSfPTVALDMKPYI----SPLRELKEKETESRSHTYELYAIDNHHGYMI-NSHYTSYVK 806
                 44336666555555444433....122222334567899********99999444.99******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (842 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       777  (0.0433376); expected 358.6 (0.02)
Passed bias filter:                      567  (0.0316247); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.73u 0.28s 00:00:01.01 Elapsed: 00:00:00.48
# Mc/sec: 5263.79
//
Query:       EPX72042.1  [L=266]
Description: U1 snRNP-associated protein Usp106 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.8e-71  239.4  10.3    5.7e-71  239.1  10.3    1.0  1  LUC7          LUC7 N_terminus
  ------ inclusion threshold ------
      0.034   14.3   2.9        1.4    9.1   2.3    2.6  2  DUF4119       Domain of unknown function, B. Theta Gene descr
      0.089   12.6   1.4       0.13   12.1   0.7    1.6  2  MCPsignal     Methyl-accepting chemotaxis protein (MCP) signa
       0.37   10.7  10.2      0.041   13.8   4.7    1.9  2  DASH_Spc19    Spc19
       0.81   10.4   7.3       0.73   10.6   2.9    2.4  2  Occludin_ELL  Occludin homology domain
       0.95    8.7   3.3        1.4    8.2   3.3    1.4  1  CorA          CorA-like Mg2+ transporter protein
          9    5.0  12.0         39    2.9  12.0    1.9  1  Fmp27_WPPW    RNA pol II promoter Fmp27 protein domain


Domain annotation for each model (and alignments):
>> LUC7  LUC7 N_terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  239.1  10.3   2.2e-74   5.7e-71       2     242 ..       4     237 ..       3     252 .. 0.93

  Alignments for each domain:
  == domain 1  score: 239.1 bits;  conditional E-value: 2.2e-74
                 XXXXXXXXXXXXXXXXXXXXXXXXXX-EEE--S--SSS-S--SSSS-S-EEEGGGHHHHHHHHHHHHHHHH-XXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        LUC7   2 aaralLdeLmGrnrnlapsekkkkvnfedpevCksylvkfCphdlfinTkadlGpCkkiHdeelkeeYeearkskkklgyeeeflrfleklledvdrki 100
                 ++r+++++LmG+n ++ +s+ +  v+f+d++vC+s+l+++Cphd+f+nTk+dlGpC+kiH+++lk++Ye+a+ s++ +gye ++l++le+ +++++r+i
  EPX72042.1   4 EQRKIIEQLMGSNLSNFTSRGQ--VHFTDRKVCRSFLCGICPHDIFTNTKMDLGPCPKIHSDKLKSDYERASYSHS-YGYEWDYLDDLERHVDECNRRI 99 
                 79*********99988887555..59*********************************************88887.********************** PP

                 XXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXX CS
        LUC7 101 qkgkqrleltqeekeeeeeakakkqeqlkeleekiekllaeaeelgeeGkVdeaqklmkeveelkeekeeleqqyeaaaaneeseasqekkmkvCeiCG 199
                 + +++r e+t+ee e+++e     ++++++  ++ie l++e++ l+++G+ ++++k  +e+ +l++ keel+q++ ++++  +++ ++++k++vC++C+
  EPX72042.1 100 DIAEARKEKTKEEIERTDEL----MREIAHTGHSIEVLIEEMKALSQKGHLNQSMKHYTELSRLRSRKEELHQEVISMNEVPSQAGTTHQKLQVCDVCS 194
                 **************999888....8************************************************************************** PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XX CS
        LUC7 200 aflivgDaqqRiedHlmGKqHlGyaklrealeelkekrekeke 242
                 a+l+  D+++R++dH++GK+HlGya+lr+  ++l+e+++ + +
  EPX72042.1 195 AYLSRLDNDRRLADHFSGKMHLGYAMLRNLAKDLREQLDVQIS 237
                 ***********************************98876633 PP

>> DUF4119  Domain of unknown function, B. Theta Gene description (DUF4119)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   2.3   0.00056       1.4      18      71 ..     106     159 ..      93     167 .. 0.85
   2 ?    3.8   0.0     0.025        65      20      47 ..     165     192 ..     158     240 .. 0.75

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00056
     DUF4119  18 grqkkeeiiseeelekRtgltGdekelltvyLrkfeegdvhvkyskkLkdLaky 71 
                 + ++keei  ++el + ++ tG   e l+  ++   +    ++  k+ ++L + 
  EPX72042.1 106 KEKTKEEIERTDELMREIAHTGHSIEVLIEEMKALSQKGHLNQSMKHYTELSRL 159
                 44789*******************************999999999999999875 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.025
     DUF4119  20 qkkeeiiseeelekRtgltGdekelltv 47 
                 + ++e+is++e+    g t ++ +   v
  EPX72042.1 165 ELHQEVISMNEVPSQAGTTHQKLQVCDV 192
                 56799********999999887665444 PP

>> MCPsignal  Methyl-accepting chemotaxis protein (MCP) signalling domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.7   5.1e-05      0.13      99     153 ..      89     143 ..      83     157 .. 0.86
   2 ?   -2.1   0.0       1.1   2.9e+03      15      41 ..     163     189 ..     147     193 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 5.1e-05
                 ...........HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH CS
   MCPsignal  99 qkeindsvesleetrqrveegselveetgealkeiveavaevadlvqeiaaasee 153
                 +++++++ + ++ ++ r e++ e++e+t e ++ei+++ ++++ l++e++a s++
  EPX72042.1  89 ERHVDECNRRIDIAEARKEKTKEEIERTDELMREIAHTGHSIEVLIEEMKALSQK 143
                 566777888888899999*******************************998764 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.1
                 HHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   MCPsignal  15 gkevanvvkqmeeieksskeisdiieV 41 
                 ++e+++ v  m+e+ +++   ++ ++V
  EPX72042.1 163 KEELHQEVISMNEVPSQAGTTHQKLQV 189
                 567777888888887776665555555 PP

>> DASH_Spc19  Spc19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   4.7   1.6e-05     0.041      69     154 ..      85     170 ..      83     173 .. 0.83
   2 ?   -0.4   0.2      0.37   9.4e+02      91     121 ..     230     252 ..     198     264 .. 0.52

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1.6e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH......HHHHT-XXXXXXXXXXXX....XXXX..XXXXXXXXXXXXXXXXXXXXXXX CS
  DASH_Spc19  69 lekaekeleklerreetLkaklelqegrlsnaesskkeeeeseeskeeeeeeenkeeekskkk..ltkeelerlkkLkqkKerLkytl 154
                 l+ +e+++++ +rr +  +a+ e+ +  ++++++  +e +++ +s e   ee +  ++k   +   + +  ++l +L+++Ke+L +++
  EPX72042.1  85 LDDLERHVDECNRRIDIAEARKEKTKEEIERTDELMREIAHTGHSIEVLIEEMKALSQKG--HlnQSMKHYTELSRLRSRKEELHQEV 170
                 78899**************************99999999999999987666555444333..234777778**************998 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.37
                 HHHHHHHHH......HHHHT-XXXXXXXXXX CS
  DASH_Spc19  91 elqegrlsnaesskkeeeeseeskeeeeeee 121
                 e++++ +s+        +++e++ e+e+++ 
  EPX72042.1 230 EQLDVQISS--------KGEEDEPENENSKH 252
                 222233333........22222222222222 PP

>> Occludin_ELL  Occludin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   2.9   0.00029      0.73       3      65 ..      64     126 ..      62     152 .. 0.88
   2 ?    1.8   0.4      0.16     4e+02      19      53 ..     151     185 ..     134     234 .. 0.67

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00029
  Occludin_ELL   3 eIksaeqrerYkaeFnkeYkeYkelhaeleevskkfseLerelkelkegskeykkieeeilqe 65 
                   ++ks+ +r +Y + +  e++   +l+++++e+++++   e++ ++ ke+ ++++++++ei ++
    EPX72042.1  64 KLKSDYERASYSHSYGYEWDYLDDLERHVDECNRRIDIAEARKEKTKEEIERTDELMREIAHT 126
                   578999********************************************9999999999876 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.16
  Occludin_ELL  19 keYkeYkelhaeleevskkfseLerelkelkegsk 53 
                   k+Y+e ++l ++ ee+ +++  +++  +++ ++++
    EPX72042.1 151 KHYTELSRLRSRKEELHQEVISMNEVPSQAGTTHQ 185
                   45666666666666666666666665555544444 PP

>> CorA  CorA-like Mg2+ transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   3.3   0.00053       1.4     125     213 ..      83     175 ..      81     238 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00053
        CorA 125 ellekleeeldeledel.....edstkkeilrelaqlrrrlvklrralapnrevlkrllakaddkllddedkey..lrdlldelerllemlealre 213
                 ++l++le+++de  +++     +++++ke+++++ +l r++++  +++  + e +k+l +   +++l++ +k y  l++l+++ e l++++ ++ e
  EPX72042.1  83 DYLDDLERHVDECNRRIdiaeaRKEKTKEEIERTDELMREIAHTGHSIEVLIEEMKALSQ---KGHLNQSMKHYteLSRLRSRKEELHQEVISMNE 175
                 689999999999999999999999999*************99999999999999967777...666666666665577888777777777766655 PP

>> Fmp27_WPPW  RNA pol II promoter Fmp27 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9  12.0     0.015        39     180     245 ..      85     160 ..      83     264 .. 0.71

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.015
  Fmp27_WPPW 180 leeleeqiekleekleelelksekedeelkeeieelekeikelkeklefletlledlkeseesse..............e 245
                 l++le+++++++++++ +e ++ek+    keeie++ + ++e+ +  + +e l+e++k+ +++ +              +
  EPX72042.1  85 LDDLERHVDECNRRIDIAEARKEKT----KEEIERTDELMREIAHTGHSIEVLIEEMKALSQKGHlnqsmkhytelsrlR 160
                 5789999************999994....555555555555555555555555555555544333322443322222110 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1731  (0.0965475); expected 358.6 (0.02)
Passed bias filter:                      817  (0.0455686); expected 358.6 (0.02)
Passed Vit filter:                        84  (0.00468515); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 1794.84
//
Query:       EPX72043.1  [L=421]
Description: RSC complex subunit Sfh1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.1e-56  190.4   0.2    7.9e-28   97.8   0.0    2.3  2  SNF5      SNF5 / SMARCB1 / INI1
      4e-11   42.3   5.1      4e-11   42.3   5.1    2.6  2  GATA      GATA zinc finger


Domain annotation for each model (and alignments):
>> SNF5  SNF5 / SMARCB1 / INI1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.2   0.1   9.7e-30   8.7e-26       2      80 ..     113     192 ..     112     197 .. 0.92
   2 !   97.8   0.0   8.8e-32   7.9e-28     118     237 .]     194     316 ..     191     316 .. 0.91

  Alignments for each domain:
  == domain 1  score: 91.2 bits;  conditional E-value: 9.7e-30
        SNF5   2 aekpetLvPiridldi.dkyrlrDtFlwNlhetlitpeqFaqtlveDldlpeeaavveeiskqireqleeyagvalhel.a 80 
                 ae++   vPir+d+++ +++rlrDtFlwN++e+++tp++Fa++l+ Dld+p ++ + ++is++ir+q+eeya va++++ +
  EPX72043.1 113 AEERDVYVPIRLDIELtNDFRLRDTFLWNMNEQVMTPDTFAHILCTDLDIPVNS-FGPQISSSIRTQIEEYAPVAEVPMpQ 192
                 6778889********9569********************************776.*********************99944 PP

  == domain 2  score: 97.8 bits;  conditional E-value: 8.8e-32
        SNF5 118 delRvlikldiqigsklltDkfEWdllsplntpEeFAkqlcadlgLsgefvtaiaHaIrEqvlkykksllesgllvaglkkl...eagwrfdee.laee 212
                 +e+ v+ ++++q++++ + D++EW+l+s+l tpE F++q+c+dlgL+gef + +aHaI+E++lk+kk+++e +l      ++   +ag r+d+    + 
  EPX72043.1 194 QEMMVVFNIQLQLSQHSYNDQVEWNLTSNL-TPEDFSTQTCNDLGLAGEFRPEMAHAIHENLLKLKKDACEGDLPDYDNDSVpgaMAGPRQDMAtMGAL 291
                 6788999***********************.***************************************8887777666645559999999998999* PP

        SNF5 213 fepkleelskeelekrekerereir 237
                 ++p+le++s ee +++e+++e+ +r
  EPX72043.1 292 WQPTLETVSLEEAKRNETNKENMVR 316
                 *******************998766 PP

>> GATA  GATA zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.3      0.31   2.7e+03      11      16 ..     317     322 ..     316     324 .. 0.80
   2 !   42.3   5.1   4.4e-15     4e-11       1      35 [.     375     411 ..     375     412 .. 0.94

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.31
        GATA  11 lWRrgp 16 
                 +WRr+ 
  EPX72043.1 317 QWRRDA 322
                 8***85 PP

  == domain 2  score: 42.3 bits;  conditional E-value: 4.4e-15
        GATA   1 CsnCgttk..TplWRrgpdgnksLCnaCGlyykkkgl 35 
                 C++C++    T + Rrgp+gnksLCnaCG++y+ +g+
  EPX72043.1 375 CRWCNVLGtgTFCVRRGPEGNKSLCNACGVAYARTGQ 411
                 ******98668**********************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (421 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       709  (0.0395449); expected 358.6 (0.02)
Passed bias filter:                      520  (0.0290033); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.25s 00:00:00.84 Elapsed: 00:00:00.46
# Mc/sec: 2776.52
//
Query:       EPX72044.1  [L=112]
Description: hypothetical protein SOCG_03976 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       465  (0.0259356); expected 358.6 (0.02)
Passed bias filter:                      209  (0.0116571); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.25s 00:00:00.60 Elapsed: 00:00:00.39
# Mc/sec: 852.24
//
Query:       EPX72045.1  [L=395]
Description: 19S proteasome regulatory subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.5e-28   96.7   0.1    1.9e-27   95.6   0.1    1.6  1  Proteasom_Rpn13  Proteasome complex subunit Rpn13 ubiquitin r
     0.0055   16.9   0.0      0.011   15.8   0.0    1.5  1  RPN13_C          UCH-binding domain


Domain annotation for each model (and alignments):
>> Proteasom_Rpn13  Proteasome complex subunit Rpn13 ubiquitin receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.6   0.1   2.1e-31   1.9e-27       1      86 []      26     112 ..      26     112 .. 0.96

  Alignments for each domain:
  == domain 1  score: 95.6 bits;  conditional E-value: 2.1e-31
  Proteasom_Rpn13   1 GkceldektkkvkpdprkGliylykeeeellhfkWkdrek.tgeaeddlilipgdasfkkveqcktgRvyvLkfksssqrlfFWlQd 86 
                      Gk++++  tk +++d+rkG +y++ e +ellhf Wk+r + ++++edd+i++p++a f k++qc+tgRvy+L+fksssq +f+W+Q+
       EPX72045.1  26 GKLNRKPGTKLLQADHRKGILYMQLETDELLHFYWKERFRnSSDIEDDFIIFPDEADFIKIDQCTTGRVYALRFKSSSQIHFYWMQE 112
                      89999999****************77778*********9999********************************************7 PP

>> RPN13_C  UCH-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   1.3e-06     0.011      28     103 ..     268     340 ..     264     349 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1.3e-06
     RPN13_C  28 ealspllsdpevveeLashLPe..egeateeelretlrSPqfrqalsslsqALqsgqlgpvlsqlgLdeeavaaaakg 103
                 +++++++ +p + ++L++h P+       ++   e  + P+f +  ssl++A+ + +++p+ s l++++++   +  +
  EPX72045.1 268 DEMHRVITHPRISHKLFPHAPPelI---RNSRKDELTQNPDFYKHFSSLERAIVKPEFEPLRSYLQISSDE--VSGPN 340
                 57899*****************533...33444566677*****************************994..44444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (395 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       478  (0.0266607); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2780.82
//
Query:       EPX72046.1  [L=910]
Description: MCM complex subunit Cdc21 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.8e-100  334.7   0.0   2.8e-100  334.0   0.0    1.3  1  MCM              MCM P-loop domain
    5.6e-38  129.6   0.9    1.1e-37  128.7   0.9    1.4  1  MCM_OB           MCM OB domain
    1.6e-29  102.2   2.6    3.7e-29  101.0   2.6    1.7  1  MCM_lid          MCM AAA-lid domain
    1.7e-16   60.7   1.1      7e-16   58.7   0.1    2.6  2  MCM_N            MCM N-terminal domain
    7.4e-06   25.5   0.0    0.00059   19.3   0.0    2.3  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
    5.6e-05   23.2   0.0    0.00019   21.5   0.0    2.0  2  AAA_5            AAA domain (dynein-related subfamily)
    0.00015   21.6   0.0     0.0019   18.1   0.0    2.3  2  AAA_3            ATPase family associated with various cellul
  ------ inclusion threshold ------
      0.033   14.0   0.1       0.11   12.3   0.1    1.9  1  AAA_lid_2        AAA lid domain
      0.053   13.5   0.6       0.11   12.4   0.6    1.5  1  Oberon_cc        Coiled-coil region of Oberon
      0.058   13.8   1.2       0.13   12.7   0.4    1.9  2  Rubrerythrin     Rubrerythrin
       0.08   13.0   0.3       0.18   11.9   0.3    1.5  1  Elf1             Transcription elongation factor Elf1 like
      0.086   12.5   0.4        4.7    6.9   0.0    3.3  4  Sigma54_activat  Sigma-54 interaction domain
       0.09   13.1   0.3        6.2    7.2   0.1    3.3  3  AAA_16           AAA ATPase domain
       0.17   11.8   0.2       0.31   11.0   0.2    1.3  1  FNIP_M           Folliculin-interacting protein middle domain


Domain annotation for each model (and alignments):
>> MCM  MCM P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  334.0   0.0  2.2e-103  2.8e-100       2     224 .]     480     704 ..     479     704 .. 0.98

  Alignments for each domain:
  == domain 1  score: 334.0 bits;  conditional E-value: 2.2e-103
                 HHHHHHHHTSSTHHHHHHHHSSTTSSS-HHHHHHHHHHHH---EBBBSSSSB..BCSS-EEEEEESSTSTHHHHHHHHHHHSSSEEEEESSSSSSSHSS CS
         MCM   2 veeikelakekdiieklvksiapsiyghedvkkaillqlfggvkkkledktk..lrgdinvllvgdpgtaKsqlLkyveklapravytsgkgssaagLt 98 
                 +e+ik++++++d+++ l +s+apsiy+++dvkk+illqlfgg++k+ +++++  +rgdin+l++gdp+t+Ksq+L+yv+k+apr+vytsgkgssa+gLt
  EPX72046.1 480 IEKIKKVSERPDLYDLLPRSLAPSIYEMDDVKKGILLQLFGGTNKTFQKGASprYRGDINILMCGDPSTSKSQILQYVHKIAPRGVYTSGKGSSAVGLT 578
                 799******************************************999987666********************************************* PP

                 SEEEEESSSSSEEEEETHHHHTTTSEEEEESGGGSTCHHHHHHHHHHHHSEEEEESSSCEEEEE--EEEEEEE--SSSSCCTTS-HHHHSSSSHHHHHH CS
         MCM  99 aavvrdeetgefvleaGalvladkGvcciDefdkmkeedrsalhEamEqqtisiaKaGivatLnartsvlaAanpkagrydkkksvaeninlsaalLsr 197
                 a+++rd++t+++vle+Galvl+d+G+cciDefdkm++++rs lhE+mEqqt+++aKaGi++tLnarts+la+anp++++y+++ +v++ni+l+++lLsr
  EPX72046.1 579 AYITRDQDTKQLVLESGALVLSDGGICCIDEFDKMTDATRSILHEVMEQQTVTVAKAGIITTLNARTSILASANPIGSKYNPEMPVTKNIDLPPTLLSR 677
                 *************************************************************************************************** PP

                 SSEEEEE-SSTTHHHHHHHHHHHHHHH CS
         MCM 198 FDlifvllDkvdeekDeelaehivslh 224
                 FDl++++lD+vde+ D++la+hivs++
  EPX72046.1 678 FDLVYLILDRVDETIDRKLANHIVSMY 704
                 ************************986 PP

>> MCM_OB  MCM OB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.7   0.9   8.4e-41   1.1e-37       2     125 ..     290     418 ..     289     419 .. 0.96

  Alignments for each domain:
  == domain 1  score: 128.7 bits;  conditional E-value: 8.4e-41
                 XGG--GGGTTSEEEEEEEEEEE---EEEEEEEEEEETTT-.-EEE.....S----SB-..TTT-HHH-EEE-GGGSEEEEEEEEEEE------------ CS
      MCM_OB   2 lRdlrsehigklvkveGivtrasevkpklkkavfeckkcgktvev.....eleePrkCeekeCeskdpfkletekskfvdfqklklQEspeevpaGelP 95 
                 +Rdl+  +i+kl++v+G+v r++ v p++k+a+f+c+ cg++v+v     ++ eP kC+++ C+ +++++l +++s+f d+q +klQE+p+ vp G++P
  EPX72046.1 290 MRDLNPGDIDKLISVKGLVLRCTPVIPDMKQAFFRCSVCGHSVTVeidrgRIAEPVKCPREICGVTNSMQLIHNRSEFADKQVIKLQETPDVVPDGQTP 388
                 8****************************************9998567666777********************************************* PP

                 -EEEEEEEGGGTT---TT-EEEEEEEEEEE CS
      MCM_OB  96 rslevileddlvdkvkPGdrvevtGiyral 125
                 +s++++++d+lvd+ k+Gdr+e+tGi+r++
  EPX72046.1 389 HSVSLCVYDELVDSSKAGDRIEITGIFRCV 418
                 ***************************987 PP

>> MCM_lid  MCM AAA-lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.0   2.6   2.9e-32   3.7e-29       1      86 [.     721     808 ..     721     809 .. 0.94

  Alignments for each domain:
  == domain 1  score: 101.0 bits;  conditional E-value: 2.9e-32
                 HHHHHHHHHHHHTT--BETCHHHHHHHHHHHHHHHHHTSS..TSSSST--HHHHHHHHHHHHHHHHHHTSSSE-HHHHHHHHHHHHHH CS
     MCM_lid   1 ellrkYiayarekikPklseeakeklseaYvelRkeeeds..krksipitvRqLesliRLseAlAklrlsevvteedveeairllkes 86 
                 e+l++Yi+yar+ i+P+++e a+++l++aYve+Rk  ed   ++k+i++t+RqLes+iRLseA+Ak++l+e+v+ edv+ea+rl+k++
  EPX72046.1 721 EFLTSYITYARNCIHPVITEPASKELVNAYVEMRKLGEDVraSEKRITATTRQLESMIRLSEAHAKMHLRETVEVEDVREATRLIKTA 808
                 689********************************9944455799****************************************986 PP

>> MCM_N  MCM N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.7   0.1   5.5e-19     7e-16       3     104 .]     171     283 ..     170     283 .. 0.92
   2 ?   -2.4   0.0       5.9   7.5e+03      40      81 ..     436     485 ..     431     512 .. 0.67

  Alignments for each domain:
  == domain 1  score: 58.7 bits;  conditional E-value: 5.5e-19
       MCM_N   3 kFedFLeefk..........ddsededgekkYrdqlqemaerekttLevdlddLaafde..eLaeailenpkeylplleealkevvkklepsykddake 89 
                 +F+ FL+ fk          ++   ++++ +Y++ l++m+  + + L++d++dL+ + +  +L++++ ++p+e++p++++ +k+v+ +l   +  + + 
  EPX72046.1 171 SFQGFLRGFKkkyrpeyrndPMPPPDAEQVVYIEALRNMRIIGLDILNLDVQDLKYYPPtkKLYNQLYSYPQEIIPIMDQTIKDVMLDLLGTNPPE-DI 268
                 79***********9999999777778899****************************7777*************************9999865555.68 PP

       MCM_N  90 fpaeltrrfqvrfkn 104
                  ++++ r +++r++n
  EPX72046.1 269 LNDIELRIYKIRPFN 283
                 999********9997 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 5.9
       MCM_N  40 evdlddLaafde........eLaeailenpkeylplleealkevvkklep 81 
                 +vd+ ++++ d+        +L + + e++   ++  ++ ++e ++k+++
  EPX72046.1 436 YVDVVHIKKQDRrrlgtdpsTLENDLAEDTAAQIDDVRRITDEEIEKIKK 485
                 67777777777666666667555555555555555555555555555544 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.026        33      21      48 ..     536     563 ..     532     584 .. 0.91
   2 !   19.3   0.0   4.6e-07   0.00059      98     168 ..     593     661 ..     586     699 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.026
  Mg_chelatase  21 GgHnlllvGppGsGKtmlakrlpsllpp 48 
                   G  n+l++G p + K+ + + ++++ p+
    EPX72046.1 536 GDINILMCGDPSTSKSQILQYVHKIAPR 563
                   7789*******************99986 PP

  == domain 2  score: 19.3 bits;  conditional E-value: 4.6e-07
  Mg_chelatase  98 kpGeislahnGvLfLDElpefkrkvlevLRePledgevtisrakakvefparfqlvaamNpcpcgklkdke 168
                   + G++ l+  G+  +DE+ +++  +  +L e +e+++vt+++a   ++  ar+ ++a++Np  +    ++e
    EPX72046.1 593 ESGALVLSDGGICCIDEFDKMTDATRSILHEVMEQQTVTVAKAGIITTLNARTSILASANPIGSK--YNPE 661
                   679999******************************************************97554..3344 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   1.4e-07   0.00019       2     124 ..     540     655 ..     539     678 .. 0.78
   2 ?   -3.5   0.0       7.5   9.6e+03      11      27 ..     854     871 ..     853     877 .. 0.76

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 1.4e-07
                 EEEE--SSSSHHHHHHHGGGGB.......S--EEEEE--TT--HHHHH--B--.........--------G-SEEEEESGGG--HHHHHHHHHHHHSSE CS
       AAA_5   2 vlLvGppGtgKselaerlaaal.......nreveyvqltrdtteedlkgrreikngttslvdsplvraaregeilvlDEveraesevlnsLlslleerr 93 
                 +l+ G+p t Ks++ +++ +         ++    v lt+++t+++ + ++        l+ ++lv     g i+++DE++++ +++ ++L+ ++e+++
  EPX72046.1 540 ILMCGDPSTSKSQILQYVHKIAprgvytsGKGSSAVGLTAYITRDQDTKQLV-------LESGALV--LSDGGICCIDEFDKMTDATRSILHEVMEQQT 629
                 7888999999999999888888766666666666777777777777666666.......5889999..99***************************** PP

                 EE..-SSSEEE---......-EEEEEESS-- CS
       AAA_5  94 llleeggelvkaknddllerfrviatanpld 124
                 + +++ g  +  ++      ++++a+anp  
  EPX72046.1 630 VTVAKAGIITTLNAR-----TSILASANPIG 655
                 **9999999988886.....78888888876 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 7.5
                 SHHHHHHHGGGGB.S--E CS
       AAA_5  11 gKselaerlaaal.nrev 27 
                 gK++++ +l+ ++ ++++
  EPX72046.1 854 GKTFMVSQLLTRFrEQST 871
                 899999999999954444 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.43   5.4e+02      14      39 ..     359     384 ..     349     394 .. 0.79
   2 !   18.1   0.0   1.5e-06    0.0019      48     116 ..     584     657 ..     570     668 .. 0.81

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.43
       AAA_3  14 llvkalakaldlefkriqftpdllPs 39 
                 +l+++ ++  d ++ ++q tpd++P 
  EPX72046.1 359 QLIHNRSEFADKQVIKLQETPDVVPD 384
                 5778888999999***********96 PP

  == domain 2  score: 18.1 bits;  conditional E-value: 1.5e-06
       AAA_3  48 eekekefefkkGpvfan...llladeinrappktqsalleameerqvtvege..thklpepflvlatqnPieqe 116
                 ++++k++ +++G+++ +   +   de ++ +  t+s l e+me+++vtv+++   ++l+    +la  nPi ++
  EPX72046.1 584 DQDTKQLVLESGALVLSdggICCIDEFDKMTDATRSILHEVMEQQTVTVAKAgiITTLNARTSILASANPIGSK 657
                 667789999999877533449999************************987622579*************9876 PP

>> AAA_lid_2  AAA lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   8.9e-05      0.11      22      49 ..     777     804 ..     771     806 .. 0.93

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 8.9e-05
   AAA_lid_2  22 llraArAlAalegrdyVtpeDvkeaapl 49 
                 ++r + A+A ++ r++V  eDv+ea +l
  EPX72046.1 777 MIRLSEAHAKMHLRETVEVEDVREATRL 804
                 899*********************9987 PP

>> Oberon_cc  Coiled-coil region of Oberon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.6   8.9e-05      0.11      16      66 ..     752     804 ..     738     820 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 8.9e-05
   Oberon_cc  16 dkakeaselklerlrkkqqveeLEsivrlKqaEAemFqlkAdeAr..reaerl 66 
                 + +k  ++++++++r + ++ +LEs++rl +a A+m+     e    rea rl
  EPX72046.1 752 EMRKLGEDVRASEKRITATTRQLESMIRLSEAHAKMHLRETVEVEdvREATRL 804
                 66778889999999999*******************97776654422555555 PP

>> Rubrerythrin  Rubrerythrin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.1       1.1   1.4e+03      62     117 ..     710     766 ..     694     776 .. 0.73
   2 ?   12.7   0.4    0.0001      0.13      26     109 ..     765     849 ..     760     860 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 1.1
                   .B.SSBBS-------TTGGHHHHHH..HHHHHHHHHHHCHHHHHHHHHHHTTSHHHHH CS
  Rubrerythrin  62 levkekvreyaeakpkflttaknLe..eaiegayaeeeemyrfyeelaekegneeakk 117
                    +  e+ +   e+ ++++t+a+n +   + e a +e  ++y ++ +l e+++ + +k+
    EPX72046.1 710 QNATEHEVLSIEFLTSYITYARNCIhpVITEPASKELVNAYVEMRKLGEDVRAS-EKR 766
                   456788888999999999999999966677888888888888888888877766.444 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 0.0001
                   TT-HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTHH..B.SSBBS-------TTGGHHHHHHHHHHHHHHHHHCHHHHHHHHHHH CS
  Rubrerythrin  26 egypqiaelFeelAeeEreHakilnklleklepele.levkekvreyaeakpkflttaknLeeaiegayaeeeemyrfyeelaek 109
                   ++++ + + +e +++  + Hak++ +   ++e  +e +   + +++ + ++p+  +   +L+ + e+++ + e+m r++++la+ 
    EPX72046.1 765 KRITATTRQLESMIRLSEAHAKMHLRETVEVEDVREaTRLIKTAIKDYATDPTTGKISLDLIYVNERETLVSEDMVRELSNLAST 849
                   56777888899*********************999999999999************************************99975 PP

>> Elf1  Transcription elongation factor Elf1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.3   0.00014      0.18      20      60 ..     321     362 ..     314     370 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00014
        Elf1  20 tkFdCpfCnheksvevkldkkekiaevsC..kvCgesfetk.vn 60 
                   F+C +C+h+  v+v++d+ +    v+C  ++Cg + +++ ++
  EPX72046.1 321 AFFRCSVCGHS--VTVEIDRGRIAEPVKCprEICGVTNSMQlIH 362
                 569*******9..9999**9999999999666899988877444 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       4.4   5.6e+03     134     150 ..     154     170 ..     148     175 .. 0.83
   2 ?    0.7   0.0      0.29   3.8e+02      20      48 ..     535     563 ..     522     569 .. 0.84
   3 ?    6.9   0.0    0.0037       4.7      86     139 ..     594     649 ..     588     657 .. 0.80
   4 ?   -0.7   0.1      0.79     1e+03     123     157 ..     754     786 ..     750     794 .. 0.69

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 4.4
                      -EEEEEEESS-HHHHHH CS
  Sigma54_activat 134 dvriiaatnedleeave 150
                      +vr+i  tn +++e+++
       EPX72046.1 154 TVRVIWGTNVSIQESIA 170
                      79**********99987 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.29
                      TSSS-EEEECSTTSSHHHHHHHHHHHSTT CS
  Sigma54_activat  20 ktdlsvlitGesGtGKellaraiheaskr 48 
                      + d+++l+ G+  t K+ + + +h+  +r
       EPX72046.1 535 RGDINILMCGDPSTSKSQILQYVHKIAPR 563
                      5679********************97765 PP

  == domain 3  score: 6.9 bits;  conditional E-value: 0.0037
                      EHHHHHTTTSEEEEETGGGS-HHHHHHHHHHHHHSEEE..SBTSSSEEE--EEEEE CS
  Sigma54_activat  86 kGlfekadgGtlfLDeigelplelQekLlrvlqegeve..rvGsskeikvdvriia 139
                      +G++  +dgG+  +De  +++ ++ + L +v+++++v+  + G  ++ ++ + i+a
       EPX72046.1 594 SGALVLSDGGICCIDEFDKMTDATRSILHEVMEQQTVTvaKAGIITTLNARTSILA 649
                      699999***************************99864225666666666665555 PP

  == domain 4  score: -0.7 bits;  conditional E-value: 0.79
                      ESBTSSSEEE--EEEEEEESS-HHHHHHTTSS-HH CS
  Sigma54_activat 123 ervGsskeikvdvriiaatnedleeaveegkfred 157
                      +++G++  ++++ + i+at+++le++++  +  + 
       EPX72046.1 754 RKLGED--VRASEKRITATTRQLESMIRLSEAHAK 786
                      566654..3445566899*******9987766555 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.1    0.0049       6.2      26      95 ..     539     600 ..     529     628 .. 0.81
   2 ?    0.3   0.0      0.65   8.3e+02     138     162 ..     604     628 ..     598     636 .. 0.86
   3 ?    0.9   0.0       0.4   5.2e+02      36      74 ..     854     884 ..     838     904 .. 0.75

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0049
      AAA_16  26 lvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipysalaqalareellrqlldeaesaele 95 
                 ++l  G++ + Ks +++ +++ +  + g++++gk  +       + l+ +++r++  +ql  e+ +  l+
  EPX72046.1 539 NILMCGDPSTSKSQILQYVHK-IAPR-GVYTSGKGSSA------VGLTAYITRDQDTKQLVLESGALVLS 600
                 57788***************6.6666.78999999999......77**************9997775555 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.65
      AAA_16 138 vlvlDdlqwadeaslqllaaLlrll 162
                 + ++D++++  +a++++l + ++ +
  EPX72046.1 604 ICCIDEFDKMTDATRSILHEVMEQQ 628
                 5689*************98887765 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.4
      AAA_16  36 GKsslvrellralekdggiflrgkcdqlesaipysalaq 74 
                 GK+ +v +ll++++++     +++ d +    ++ a + 
  EPX72046.1 854 GKTFMVSQLLTRFREQ----STTHVDAS----EFEASLA 884
                 9************999....44444444....3333344 PP

>> FNIP_M  Folliculin-interacting protein middle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.2   0.00024      0.31      32     135 ..     764     865 ..     749     875 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00024
      FNIP_M  32 kqflleHfplleselsrLrsaiekaslkkksfvqrivealeefretlldlytaprleepvwlnlvssesekrqlaerfleelsslleeldtkktnfFls 130
                 ++++   +  les+  rL +a  k+ l+++ +v+ + ea+  +++ + d  t p     + l+l+  +++++ + e++++els+l + l    + f++s
  EPX72046.1 764 EKRITATTRQLESM-IRLSEAHAKMHLRETVEVEDVREATRLIKTAIKDYATDPTT-GKISLDLIYVNERETLVSEDMVRELSNLASTLTAGGKTFMVS 860
                 56666666778775.59999*****************************9999987.6699*****9999999999*********************** PP

      FNIP_M 131 tllta 135
                 +llt 
  EPX72046.1 861 QLLTR 865
                 ***96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (910 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       691  (0.0385409); expected 358.6 (0.02)
Passed bias filter:                      516  (0.0287802); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.75u 0.32s 00:00:01.07 Elapsed: 00:00:00.48
# Mc/sec: 5680.45
//
Query:       EPX72047.1  [L=455]
Description: NAD/NADH kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.2e-58  197.3   0.0      4e-58  196.9   0.0    1.1  1  NAD_kinase    ATP-NAD kinase
  ------ inclusion threshold ------
      0.027   14.6   0.1        2.8    8.1   0.0    2.7  2  F_actin_bind  F-actin binding


Domain annotation for each model (and alignments):
>> NAD_kinase  ATP-NAD kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  196.9   0.0   4.5e-62     4e-58       1     291 [.     107     398 ..     107     399 .. 0.97

  Alignments for each domain:
  == domain 1  score: 196.9 bits;  conditional E-value: 4.5e-62
                 .EEEEESSCGGTCSHHHHHHHHHHHCT-..EEEEECCGGCCSSSTT--HHHHTTTT--.......EEECCC-TTTTTSSSEEEEEE-HHHHHHHHHHHH CS
  NAD_kinase   1 kvgivvnpikkeaieraeevarwLldalsrvlevtveeklgeslaeaaefrsevisvlkkvkttddtrkaleafadagvdliivvGGDGTaldvarllq 99 
                 +++iv++p++ +++ ++  ++++Ll++ s  + v+v++ l++s+ + a++  ++ + ++++ +  +++  ++ + + ++dlii+vG+  T+l  ++l+q
  EPX72047.1 107 NILIVTKPRNHSLVYLTADITKFLLTSTSPDSSVYVDKRLANSKRFIANDILNELELQEDRIK--YWTPYICLVKPTQFDLIITVGDNQTVLYTSWLFQ 203
                 589************************778899****************************99..********************************** PP

                 HCT-EEEEEESSS-.-SS-SEEGGGHHHHHHHHHHT-SEEEEEEEEEEEEEETTE......EEEEEEESSEEEEEESSSSS-EEEEEEETTEEEEEEEE CS
  NAD_kinase 100 kaeiPvlgvnaGvk.gfltefepeaaaellekllegeirvekrevldavimrskgeediadiviensvlnevviirgpgstlielelyvdtelleadql 197
                 k  +Pvl+++ + + gflt f+ +++++ ++ ll+  + +   ++l+++ +++++e +    v +++vl+ev + rg  + +++l+ly + el++++q+
  EPX72047.1 204 KLCPPVLTLSDADApGFLTHFPAADYKKNINYLLNSSVSLRFSSRLECSYFKYNAETEQYTHVCTSYVLDEVQVSRGEHPYISNLNLYNNSELMTVVQA 302
                 **********98765***********************999999***********998888888999******************************** PP

                 SEEEEE-TGGGGTHHHHTT--EE-TT---EEEEEESESSS----EEE-TT-EEEEEE-..SS--EEEEETTTEEEEE-TT-EEEEEEESSEEEEEE CS
  NAD_kinase 198 dglivstPtGstayslsaGgplisPgvlailivpicPhslssrpiVvssssklrirva..srseallaldGseelelspgdevrvtasdkkfklir 291
                 dgli+stPtGst+ s+ aGg+l++P+++a+li+picPh ls+rp+++++ s ++i+++  sr++a    dG++++e++ gd++++++s+++f +i+
  EPX72047.1 303 DGLIISTPTGSTNMSMNAGGSLVHPALNALLITPICPHCLSFRPVILPDYSVVTIEIPldSRASAFYSADGHSKIEMTRGDYLSIVTSQYPFTAIQ 398
                 **********************************************************99********************************9985 PP

>> F_actin_bind  F-actin binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0    0.0088        79      66     107 ..      16      57 ..      13      59 .. 0.88
   2 ?    8.1   0.0   0.00031       2.8      49      79 ..     138     169 ..     112     178 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.0088
  F_actin_bind  66 ellsrLesqsreLrsavgsknssenekllqdlqstvkeisnv 107
                   ++l+++++++  Lr++ +++ +s ++ +l+ l++ v+e+sn+
    EPX72047.1  16 DELNKIKLKNLYLRIRSNENVNSPANFDLSGLNTPVDEVSNA 57 
                   789***********98777777788899***********985 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.00031
  F_actin_bind  49 Csgyvds.ipphakFaFrellsrLesqsreLr 79 
                   +s yvd+ +++  +F   ++l+ Le+q + ++
    EPX72047.1 138 SSVYVDKrLANSKRFIANDILNELELQEDRIK 169
                   689****9999*****************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (455 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       461  (0.0257125); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.29s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 3155.06
//
Query:       EPX72048.1  [L=128]
Description: hypothetical protein SOCG_03980 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
     0.0028   17.7   0.2      0.008   16.3   0.2    1.8  1  GBR2_CC        Gamma-aminobutyric acid type B receptor subuni
  ------ inclusion threshold ------
      0.081   12.5   1.1      0.096   12.2   1.1    1.1  1  DUF1189        Protein of unknown function (DUF1189)
       0.14   12.4   7.2       0.17   12.1   7.2    1.1  1  Jnk-SapK_ap_N  JNK_SAPK-associated protein-1
       0.15   12.4   3.3       0.18   12.1   2.0    1.9  2  ATP-synt_E_2   ATP synthase epsilon subunit


Domain annotation for each model (and alignments):
>> GBR2_CC  Gamma-aminobutyric acid type B receptor subunit 2 coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.2   1.8e-06     0.008      11      37 ..      50      76 ..      46      77 .. 0.94

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 1.8e-06
     GBR2_CC 11 eklQaenHslRmkitelDKdLEEVTMQ 37
                e l + nH lR++   l +  EE+T Q
  EPX72048.1 50 EDLEISNHNLRIINEGLERKVEEITVQ 76
                67899********************99 PP

>> DUF1189  Protein of unknown function (DUF1189)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   1.1   2.2e-05     0.096      60     142 ..       9      98 ..       4     118 .. 0.67

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2.2e-05
     DUF1189  60 eeeipdFtiedGelqieekepiiiqedgitiifDtsgetdeedlekynngililkdkivi.......knggttqsysysdledqkltked 142
                 ++e+ +F++++++++++e +   ++ dg  + +D   +++ edle  n ++ i ++ +         ++ ++++++  + l +++ ++e+
  EPX72048.1   9 KQEMEEFNLKSNQIKMNEWKHPSEKADGRWLQLDARINRTVEDLEISNHNLRIINEGLERkveeitvQSSMEKEKQAPNRLLQTNANEEK 98 
                 5799***************98899*******************99999988885554433211011144444443333333333444444 PP

>> Jnk-SapK_ap_N  JNK_SAPK-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   7.2   3.9e-05      0.17      47     151 ..       7     108 ..       4     116 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 3.9e-05
  Jnk-SapK_ap_N  47 eeeaeleelreeleqLeteyerekelrkraeeeleeiedqweeerkelqekveqleeenrelelkaknaadqlsrleekeaelkkeysklherete 142
                    ee++e+ee   + +q++   ++ k+ +++a+ ++++++  +++  ++l+   ++l+  n+ le k+++++ q s  +ek+a   +  +++ ++e+ 
     EPX72048.1   7 EEKQEMEEFNLKSNQIKM--NEWKHPSEKADGRWLQLDARINRTVEDLEISNHNLRIINEGLERKVEEITVQSSMEKEKQAPN-RLLQTNANEEKV 99 
                    678899999999999987..77788899999**************************************99998888888877.445555555666 PP

  Jnk-SapK_ap_N 143 llkklkelv 151
                    ll++   ++
     EPX72048.1 100 LLHSVNNVL 108
                    666665555 PP

>> ATP-synt_E_2  ATP synthase epsilon subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   2.0     4e-05      0.18      13      54 ..      59     100 ..      50     102 .. 0.89
   2 ?   -3.1   0.0       2.2   9.8e+03       9      17 ..     108     116 ..     105     126 .. 0.64

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 4e-05
  ATP-synt_E_2  13 lniLkskLdeKKsElLkkiNmEYEKlLKqRLdeLeklKrkvL 54 
                   l+i+ + L+ K +E+  +  mE EK   +RL + +    kvL
    EPX72048.1  59 LRIINEGLERKVEEITVQSSMEKEKQAPNRLLQTNANEEKVL 100
                   8899***************************99887777776 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 2.2
  ATP-synt_E_2   9 iDKYlniLk 17 
                   +D ++ i+ 
    EPX72048.1 108 LDNFISIVD 116
                   677777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1493  (0.0832729); expected 358.6 (0.02)
Passed bias filter:                      546  (0.0304535); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 835.81
//
Query:       EPX72049.1  [L=204]
Description: hypothetical protein SOCG_03981 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.029   14.5   0.0       0.22   11.7   0.0    2.1  2  Ribosomal_L50  Ribosomal subunit 39S
       0.14   10.9   0.0       0.19   10.5   0.0    1.1  1  Say1_Mug180    Steryl acetyl hydrolase


Domain annotation for each model (and alignments):
>> Ribosomal_L50  Ribosomal subunit 39S
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0     0.066   5.9e+02       7      40 ..      30      63 ..      26      67 .. 0.82
   2 ?   11.7   0.0   2.4e-05      0.22      41      75 ..     116     150 ..      87     181 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.066
  Ribosomal_L50  7 leeivaesykealgaelkakdegflqlsLeDlel 40
                   +++ ++  +k+++g+e+++++e+++q +L+ le+
     EPX72049.1 30 VRQSILGRIKDMFGKEKEKGEEQVSQKDLPTLEV 63
                   6788888999999999999999999999987776 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 2.4e-05
  Ribosomal_L50  41 KFaflkrlqqllgheipDykltklhtvkdlveyle 75 
                    +   +k  +q++gh + D  l ++++ +d+++y+ 
     EPX72049.1 116 RLRAAKLAYQKTGHIVYDSPLQEISNWDDMYRYYD 150
                    56678999**************************4 PP

>> Say1_Mug180  Steryl acetyl hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   2.1e-05      0.19     222     313 ..      63     159 ..      58     173 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 2.1e-05
  Say1_Mug180 222 vvlPkkaiaiSPWlnltildekekeylkasdklDvlc.lkglelfgklyvnn.repeeelktdefvniekn...fdievWseilekckllityGddE 313
                  vv+Pkk   +S W     +++   e l++ d l  ++ l+++e f   + ++ r  + +l +++   i ++    +i+ W+++ +  +l + yGd  
   EPX72049.1  63 VVFPKKRTNVSKWEGKQLFEKFSGEKLNKADSLAIISnLRSSETFSSPWSPEdRLRAAKLAYQKTGHIVYDsplQEISNWDDMYRYYDLQVQYGDST 159
                  79**********************************96799*********997666777777777666665223599*****************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       487  (0.0271627); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 1390.45
//
Query:       EPX72050.1  [L=83]
Description: Tim9-Tim10 complex subunit Tim9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.7e-17   61.7   3.0    4.9e-17   61.3   3.0    1.3  1  zf-Tim10_DDP  Tim10/DDP family zinc finger


Domain annotation for each model (and alignments):
>> zf-Tim10_DDP  Tim10/DDP family zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.3   3.0   2.7e-21   4.9e-17       2      64 .]      14      76 ..       5      76 .. 0.97

  Alignments for each domain:
  == domain 1  score: 61.3 bits;  conditional E-value: 2.7e-21
  zf-Tim10_DDP  2 qleqeqqvanaqelvnkltekCfkkCigkypgssLdsseesCldnCvdryldvsnlvskrlqe 64
                  q+ + +q+++ ++++ +l++ Cf++Ci ++++s++  +e++Cl++C+d++++++++v++r++e
    EPX72050.1 14 QVLEAKQIKDYTNMMFNLSQGCFNDCIVDFTSSKVGDKESACLTRCADKFFKHTQRVGQRFAE 76
                  78899*******************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       733  (0.0408835); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.32s 00:00:00.74 Elapsed: 00:00:00.52
# Mc/sec: 479.67
//
Query:       EPX72051.1  [L=158]
Description: hypothetical protein SOCG_03983 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       420  (0.0234257); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 1105.97
//
Query:       EPX72052.1  [L=563]
Description: AGC/AKT protein kinase Gad8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.1e-69  232.9   0.0    6.3e-69  232.3   0.0    1.3  1  Pkinase         Protein kinase domain
    2.3e-30  105.7   0.0    3.6e-30  105.1   0.0    1.2  1  Pkinase_Tyr     Protein tyrosine kinase
    3.3e-11   43.7   0.6    7.7e-11   42.5   0.6    1.7  1  Pkinase_C       Protein kinase C terminal domain
    2.5e-06   26.7   0.0    2.5e-06   26.7   0.0    1.7  2  Haspin_kinase   Haspin like kinase domain
    0.00014   22.1   0.0    0.00026   21.2   0.0    1.5  1  C2              C2 domain
     0.0049   16.2   0.0      0.011   15.1   0.0    1.5  2  Kinase-like     Kinase-like
  ------ inclusion threshold ------
      0.071   12.7   0.0        2.4    7.7   0.0    2.5  3  FTA2            Kinetochore Sim4 complex subunit FTA2
       0.11   12.0   0.0       0.21   11.2   0.0    1.3  1  Choline_kinase  Choline/ethanolamine kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  232.3   0.0   2.8e-72   6.3e-69       3     264 .]     226     479 ..     224     479 .. 0.94

  Alignments for each domain:
  == domain 1  score: 232.3 bits;  conditional E-value: 2.8e-72
                 EEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHHH CS
     Pkinase   3 kleklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseeea 100
                  l+ +G+GsfGkV+++++++t++i+A+K+i+k ++ +++e +++l+E ++l++++ p+iv l+ +f+++++ly+vl +v+ggel+++l+r+g++   +a
  EPX72052.1 226 LLKVVGKGSFGKVMQVRKRDTSRIYALKTIRKAHIVSRSEvDHTLAERTVLAQVNNPFIVPLKFSFQSPEKLYIVLAFVNGGELFHHLQREGCFGTYRA 324
                 6789*********************************9999********************************************************** PP

                 HHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.BCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-STT CS
     Pkinase 101 kkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.ltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgkppfs 198
                 k++++++l +le lH+ ++i+rDlKpeNiL+d +g++ ++DFGl+k    +++ +++f+gt+eYlAPE+l +++y+k vD+W+lGv+lye++tg ppf+
  EPX72052.1 325 KFYTAELLVALECLHEFNVIYRDLKPENILLDYTGHIALCDFGLCKLNMAKTDrTNTFCGTPEYLAPELLLGHGYTKVVDWWTLGVLLYEMITGLPPFY 423
                 **********************************************87666666********************************************* PP

                 TSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTT...HHHHHTSGGG CS
     Pkinase 199 gekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRlt...aeellqhpyl 264
                 +e+ +e ++k+l+              +l+ +++++ + ++ll  ll++ p kRl+   a+e+++hp++
  EPX72052.1 424 DENINEMYKKILQ-------------DTLRFPDNVDADGRNLLCGLLTRSPDKRLGsrgAQEIKNHPFF 479
                 5555553333333.............478999***********************9999*********8 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.1   0.0   1.6e-33   3.6e-30       3     249 ..     226     464 ..     224     468 .. 0.87

  Alignments for each domain:
  == domain 1  score: 105.1 bits;  conditional E-value: 1.6e-33
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTS..SHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeea..teeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkeke 98 
                  l k +G+G+fGkV++ + +    +++   a+Kt+++ +  +++e ++ l e +++ ++++p iv l     + e+l+iv+ +v+gG+L ++L+++   
   EPX72052.1 226 LLKVVGKGSFGKVMQVRKR----DTSRIYALKTIRKAHivSRSEVDHTLAERTVLAQVNNPFIVPLKFSFQSPEKLYIVLAFVNGGELFHHLQRE--G 317
                  6789**********99988....888899*****66432267789999**********************************************8..9 PP

                  TSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHHH CS
  Pkinase_Tyr  99 kltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfGvllw 196
                   + + +   +++++  ++e L++ +++ rdl   N+Ll+ + ++ ++DfGL++    + ++ ++++     +++apE l  + +t+  D W  Gvll+
   EPX72052.1 318 CFGTYRAKFYTAELLVALECLHEFNVIYRDLKPENILLDYTGHIALCDFGLCKLN--MAKTDRTNTFCGTPEYLAPELLLGHGYTKVVDWWTLGVLLY 413
                  99999999999******************************************88..444444555566779************************** PP

                  HHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS CS
  Pkinase_Tyr 197 EiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeR 249
                  E++t g  p+ + + +e+++k+ ++  l+ p+++ ++  +l+   ++++p++R
   EPX72052.1 414 EMIT-GLPPFYDENINEMYKKILQD-TLRFPDNVDADGRNLLCGLLTRSPDKR 464
                  ****.*******9999999999654.466777777777777776666666666 PP

>> Pkinase_C  Protein kinase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.5   0.6   3.4e-14   7.7e-11       1      46 []     500     541 ..     500     541 .. 0.98

  Alignments for each domain:
  == domain 1  score: 42.5 bits;  conditional E-value: 3.4e-14
   Pkinase_C   1 vesdeDtsNFDpeFTeedprdtppddmpagspltssvqenFrGFtY 46 
                 ves+ DtsNFD+eFT+e p+d+ ++    +s+l++ vq++F  ++Y
  EPX72052.1 500 VESAIDTSNFDSEFTSEIPMDSVVA----DSHLSETVQQQFANWSY 541
                 89***********************....8***************9 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.0   3.5       4.6     1e+04       5      32 ..      29      56 ..      20      70 .. 0.53
   2 !   26.7   0.0   1.1e-09   2.5e-06     142     259 ..     247     375 ..     225     387 .. 0.79

  Alignments for each domain:
  == domain 1  score: -5.0 bits;  conditional E-value: 4.6
  Haspin_kinase  5 lsleslksrssqsslkhktshssLqkfs 32
                   l  ++  s+ssq+s  +++s+ss ++ s
     EPX72052.1 29 LRNNAHSSISSQKSSDERSSRSSEDRQS 56
                   3334444555666666666655544433 PP

  == domain 2  score: 26.7 bits;  conditional E-value: 1.1e-09
  Haspin_kinase 142 skelslkelkslklvkgtypglllllqdkvlkek........pdfyseqqlflvlllkdkGtdLeevklkswkqalsifwqivkiLyvaEtkfeFE 229
                    s++  lk  ++ ++v  +  +++l  +  +++ +          f+s ++l++vl + ++G+   +++ +      +  + +++ L + E   eF 
     EPX72052.1 247 SRIYALKTIRKAHIVSRSEVDHTLAERTVLAQVNnpfivplkFSFQSPEKLYIVLAFVNGGELFHHLQREGCFGTYRAKFYTAELLVALECLHEFN 342
                    455555666666777666555555555555555567777766889999*******************999999999999999********988887 PP

  Haspin_kinase 230 ..HRdLhldniLvdknlnvtlidlklsRle.ss 259
                       RdL+ +niL+d ++++ l+d+ l++l+ ++
     EPX72052.1 343 viYRDLKPENILLDYTGHIALCDFGLCKLNmAK 375
                    559**************************9633 PP

>> C2  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   1.2e-07   0.00026       2      90 ..      66     186 ..      65     198 .. 0.70

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 1.2e-07
                 EEEEEEEEEESSSSSST.......TSS....................CEEEEEEEEECEEEEEE-SCSSS.SSSEEEEEEEEEESCHTTSEEEEEEEEE CS
          C2   2 klevtvieAknLpnkdk.......kgs....................sdpyvkvsldgkqkakTrvikns.lnPvWnekftfevaeleeakLeveVfdn 72 
                  l+vt+i A++L    +         s                      py++v++d++++        + +nP+W+ + tf+v+    +kL + ++ +
  EPX72052.1  66 LLQVTIIAARDLRLPSGytpssytA-SfgaapstnglghsrsrshawWLPYIVVEFDKNEVLVDALNTATlENPRWDYQATFDVSR--YSKLSLNIYLR 161
                 699*********7773444444430.04445555566777888899999*******88888888855555458*************..66666666665 PP

                 CS.......SSTEEEEEEEEEEGHH CS
          C2  73 dr.......lskddfiGkveiplst 90 
                 ++       +++d f+G ++++ s 
  EPX72052.1 162 SStsrlrngMGNDVFLGGIKLSPSF 186
                 5545888877888899999887554 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       1.7   3.8e+03      18      57 ..     228     267 ..     226     278 .. 0.77
   2 !   15.1   0.0   4.7e-06     0.011     150     288 .]     328     464 ..     308     464 .. 0.74

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.7
  Kinase-like  18 ellkkgdrsvvfevkdqetgeplavkvfllpseaskkdle 57 
                  ++++kg +++v++v+   t    a+k        s+++++
   EPX72052.1 228 KVVGKGSFGKVMQVRKRDTSRIYALKTIRKAHIVSRSEVD 267
                  5788999999999999999998888887777777777666 PP

  == domain 2  score: 15.1 bits;  conditional E-value: 4.7e-06
  Kinase-like 150 TlqlirlaanLqakglvhgkftvdnllldekgglmlggft..aLvragtkvvlsevekgfaPpEllgsrggytrknktkmthkldaWqlGlviyriwc 245
                  T++l+     L++  ++  +++++n+lld  g + l +f+  +L  a+t    ++ + +   pE l+            +t  +d W+lG+  y +  
   EPX72052.1 328 TAELLVALECLHEFNVIYRDLKPENILLDYTGHIALCDFGlcKLNMAKTDRT-NTFCGT---PEYLAPELL----LGHGYTKVVDWWTLGVLLYEMIT 417
                  6666666678999*************************97335666666666.666633...444444333....22357889*************99 PP

  Kinase-like 246 lklPl.tlateeakeewkfklckkipekv....kaLlkkfLqlsqedR 288
                     P+ ++  +e+ ++ +++   + p++v    + Ll ++L +s ++R
   EPX72052.1 418 GLPPFyDENINEMYKK-ILQDTLRFPDNVdadgRNLLCGLLTRSPDKR 464
                  9888745666666666.8999999999993333458888888777666 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       1.7   3.8e+03     133     163 ..      34      64 ..      10      74 .. 0.66
   2 ?    7.7   0.0    0.0011       2.4      22      59 ..     222     261 ..     214     286 .. 0.75
   3 ?    1.9   0.0     0.066   1.5e+02     178     204 ..     328     354 ..     323     369 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.7
        FTA2 133 qnsfaketedrsralgeedgkkrpiraIVKe 163
                 ++s++++ ++++r  ++ ++++ p   +V++
  EPX72052.1  34 HSSISSQKSSDERSSRSSEDRQSPQSTVVQP 64 
                 2222222224567777788888888888887 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.0011
        FTA2  22 kdiefleyLgkglhsiVlkvkirgk..eYALKlFrfleae 59 
                 + +++l+++gkg  + V++v+ r+   +YALK  r+ +  
  EPX72052.1 222 DAFDLLKVVGKGSFGKVMQVRKRDTsrIYALKTIRKAHIV 261
                 46899****************998666*****98887543 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.066
        FTA2 178 lpkllrdlkklhklgIvvrDlkeenyi 204
                 + +ll  l+ lh+  ++ rDlk+en++
  EPX72052.1 328 TAELLVALECLHEFNVIYRDLKPENIL 354
                 6789999*****************986 PP

>> Choline_kinase  Choline/ethanolamine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   9.3e-05      0.21     151     189 ..     347     384 ..     335     402 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 9.3e-05
                     --SGGGEEE.-CTTEEEE--GTT-EEEEHHHHHHHHHHH CS
  Choline_kinase 151 DlqegNillnkeekklvlIDFEYagynyrgfDlanhfiE 189
                     Dl ++Nill + ++++ l DF  +  n++  D  n f+ 
      EPX72052.1 347 DLKPENILL-DYTGHIALCDFGLCKLNMAKTDRTNTFCG 384
                     9********.9**************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (563 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       501  (0.0279436); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.55u 0.31s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 3800.39
//
Query:       EPX72053.1  [L=433]
Description: SAGA complex subunit Ada2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.9e-14   51.8   0.0    1.9e-13   50.3   0.0    1.8  1  Myb_DNA-binding  Myb-like DNA-binding domain
    4.9e-10   39.1   4.1    8.5e-10   38.3   4.1    1.4  1  ZZ               Zinc finger, ZZ type
      3e-06   27.4   0.0    8.8e-06   25.9   0.0    1.8  1  Myb_DNA-bind_6   Myb-like DNA-binding domain
    4.9e-06   26.8   3.0    0.00012   22.4   0.0    3.3  3  SWIRM            SWIRM domain
     0.0029   17.6   1.8     0.0071   16.3   1.8    1.6  1  Baculo_IE-1      Baculovirus immediate-early protein (IE-0)
  ------ inclusion threshold ------
      0.068   12.9   0.1       0.12   12.0   0.1    1.4  1  Fungal_KA1       Fungal kinase associated-1 domain
      0.099   13.0   5.9       0.22   11.9   5.9    1.6  1  C1_2             C1 domain


Domain annotation for each model (and alignments):
>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.3   0.0   7.5e-17   1.9e-13       2      44 ..      64     108 ..      63     109 .. 0.95

  Alignments for each domain:
  == domain 1  score: 50.3 bits;  conditional E-value: 7.5e-17
                      SSSBHHHHHHHHHHHHHHT.TCHHHHHHHHT.SS-HHHHHHHHHH CS
  Myb_DNA-binding   2 gkWteeEdelLleavkkhG.nrWkkIaerlg.gRtekqcrsrwrn 44 
                        W ++E++lL++a++ +G ++W+ Iae++g gRt+++cr+++ n
       EPX72053.1  64 EDWGADEELLLIDACETLGlGNWADIAEYVGnGRTKEDCRDHYIN 108
                      57*****************************99**********87 PP

>> ZZ  Zinc finger, ZZ type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.3   4.1   3.3e-13   8.5e-10       3      45 .]       4      47 ..       3      47 .. 0.94

  Alignments for each domain:
  == domain 1  score: 38.3 bits;  conditional E-value: 3.3e-13
                S-EE-TTT-S..EESSEEEESSSSS-EE-HHHHHH..H---SSE CS
          ZZ  3 kkytCdgCseapligvRyhclrcsdYDLCqsCfst.hkagkhkm 45
                +ky+C++C+++ +     +c+ c d+DLC++C+++    g+h++
  EPX72053.1  4 QKYHCNVCAQDITRMIHIRCAECADFDLCIPCYTSgASLGEHQP 47
                58*********************************999999986 PP

>> Myb_DNA-bind_6  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9   0.0   3.5e-09   8.8e-06       1      56 [.      66     122 ..      66     124 .. 0.87

  Alignments for each domain:
  == domain 1  score: 25.9 bits;  conditional E-value: 3.5e-09
  Myb_DNA-bind_6   1 WteeEdeiLlklvekyg.ndWknIaeal.nrRtpkqcfdrwknkLrpkisrkkwskee 56 
                     W ++E+ +L++ +e+ g  +W  Iae   n Rt+++c+d+++n    + ++ ++sk+e
      EPX72053.1  66 WGADEELLLIDACETLGlGNWADIAEYVgNGRTKEDCRDHYIN-TYIETNNYPLSKSE 122
                     8899*************66*********669************.66777777777765 PP

>> SWIRM  SWIRM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.19     5e+02      35      58 ..     101     124 ..     100     139 .. 0.84
   2 ?    1.0   0.6      0.22   5.5e+02       6      47 ..     173     215 ..     168     238 .. 0.75
   3 !   22.4   0.0   4.6e-08   0.00012       7      87 ..     360     430 ..     353     431 .. 0.92

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.19
       SWIRM  35 kiRnkiialyrenpkeyltvteaq 58 
                 ++R++ i++y e+ +  l+++e+ 
  EPX72053.1 101 DCRDHYINTYIETNNYPLSKSEFD 124
                 58**********999999999984 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.22
       SWIRM   6 FdpdslhpiEkellselfngk...dktpeeYlkiRnkiialyren 47 
                 Fd + +++ E+ +    f+++   +k++e Y+k+  +++++y+++
  EPX72053.1 173 FDQEYMNEAEVSVKDMNFEEDaseSKQQEDYIKL--TMMNIYNSR 215
                 8889999999998888886667778999999765..677766654 PP

  == domain 3  score: 22.4 bits;  conditional E-value: 4.6e-08
       SWIRM   7 dpdslhpiEkellselfngkdktpeeYlkiRnkiialyrenpkeyltvteaqkalkrrrltgidvnllsrihefLerwGlI 87 
                 d + l+++E+ l+ +l     + p+ +l+++  +i++      + +++++a+++lk      id +++++i++f++r ++I
  EPX72053.1 360 DRHLLSDEEHSLCLQLQ----IFPKPFLALKYALISASLLL-DKPFSKDDAVQLLK-----HIDHSKVEQIYDFFKRSNWI 430
                 5688999******9999....9*****************96.777******99998.....89*****************9 PP

>> Baculo_IE-1  Baculovirus immediate-early protein (IE-0)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   1.8   2.8e-06    0.0071      80     113 ..       5      38 ..       2      58 .. 0.88

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 2.8e-06
  Baculo_IE-1  80 lyqcnicedtsaeerflkPneccGykicnlcyan 113
                   y+cn+c +  +   +++  ec  + +c  cy+ 
   EPX72053.1   5 KYHCNVCAQDITRMIHIRCAECADFDLCIPCYTS 38 
                  59******************************75 PP

>> Fungal_KA1  Fungal kinase associated-1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   4.8e-05      0.12       3      49 ..     255     300 ..     253     309 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 4.8e-05
  Fungal_KA1   3 qnwFarlfsvksatkvlktslskkelrqelaklLreWkkyGlkdvks 49 
                  + Farl+s +  +k l+   ++  l +++++ L+eW+++Gl++v++
  EPX72053.1 255 TKAFARLLSAEDYRKFLHGLFEQVALVKRIQE-LQEWRQMGLTSVEQ 300
                 578***************************98.68*********986 PP

>> C1_2  C1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   5.9   8.5e-05      0.22      18      46 ..       5      35 ..       2      36 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 8.5e-05
        C1_2 18 sfnCsaCgrkidgff.YsCseC.dfslhvrC 46
                +++C++C ++i+ +   +C eC df l++ C
  EPX72053.1  5 KYHCNVCAQDITRMIhIRCAECaDFDLCIPC 35
                789*******988889******99*****99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (433 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       679  (0.0378716); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 2820.39
//
Query:       EPX72054.1  [L=134]
Description: 40S ribosomal protein S17 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-62  209.3   1.4    1.3e-62  209.1   1.4    1.0  1  Ribosomal_S17e  Ribosomal S17
  ------ inclusion threshold ------
      0.054   12.6   0.1      0.065   12.3   0.1    1.1  1  PdxJ            Pyridoxal phosphate biosynthesis protein PdxJ


Domain annotation for each model (and alignments):
>> Ribosomal_S17e  Ribosomal S17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  209.1   1.4   1.5e-66   1.3e-62       1     120 [.       1     120 [.       1     122 [. 0.98

  Alignments for each domain:
  == domain 1  score: 209.1 bits;  conditional E-value: 1.5e-66
                     XX----HHHHHHHHHHHHS-TTT--S-HHHHHHHHHHHS----SHHHHHHHHHHHHHHHHTTSS--SS---HHHHHHHHHHH------------- CS
  Ribosomal_S17e   1 mgrvrtktvKkaarviiekyyskltndFhtnkkvceevaiipskklrnkiaGyvthlmkriqkgpvrgislklqeeererrdnyvpevsaldqea 95 
                     mgrvrtkt K+a+rv+iekyy++lt+dF+tnk++++evaii+sk+lrnkiaGy+thlm+riq+gpvrgis+klqeeerer+d+yvpevs+l++e+
      EPX72054.1   1 MGRVRTKTTKRASRVVIEKYYPRLTLDFQTNKRIVDEVAIIASKRLRNKIAGYTTHLMRRIQRGPVRGISFKLQEEERERKDQYVPEVSELEKEK 95 
                     9********************************************************************************************** PP

                     ----HHHHHHHHHH-X.XXXXXXXX CS
  Ribosomal_S17e  96 ievdkdtkemlkslgfeslsnlevt 120
                     i+vd+dtk+m+k+lg++s+++l v 
      EPX72054.1  96 INVDQDTKDMIKALGYDSIPTLVVN 120
                     ********************99876 PP

>> PdxJ  Pyridoxal phosphate biosynthesis protein PdxJ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   7.2e-06     0.065       6      85 ..      35     116 ..      34     129 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 7.2e-06
                 -HHHHHHHHCCSSS..-S-HHHHHHHHHCCT.SEEEEE--TT-SSS-HHHHHHHHHH-SSEEEEEEESSHHHHHHHHHH--S CS
        PdxJ   6 idhvAtlRnarggn..ePdvveaaelaeeaGAdgitvhlreDrRhiqdeDveelkelvktelnlEmalteemleialelkpe 85 
                 +d+vA++  +r  n      +++++ +++  ++gi + l+e++R  +d+ v e++el k+++n++ ++++ + ++  +  p+
  EPX72054.1  35 VDEVAIIASKRLRNkiAGYTTHLMRRIQRGPVRGISFKLQEEERERKDQYVPEVSELEKEKINVDQDTKDMIKALGYDSIPT 116
                 789999988876553256788899999999***********************************99888777666665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       633  (0.0353059); expected 358.6 (0.02)
Passed bias filter:                      348  (0.0194099); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.43
# Mc/sec: 933.62
//
Query:       EPX72055.1  [L=354]
Description: outer membrane ATPase Msp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.2e-38  131.1   0.0    9.8e-38  129.6   0.0    1.8  2  AAA              ATPase family associated with various cellul
    4.7e-07   29.7   0.0    1.2e-06   28.3   0.0    1.7  1  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    6.4e-07   29.4   0.2    3.4e-06   27.1   0.2    2.1  1  AAA_5            AAA domain (dynein-related subfamily)
    2.6e-06   27.8   2.1    0.00072   19.8   0.6    3.7  3  AAA_22           AAA domain
    6.6e-06   26.6   1.7    0.00032   21.1   0.0    2.6  2  AAA_16           AAA ATPase domain
    8.8e-06   25.8   0.0      2e-05   24.6   0.0    1.7  1  AAA_14           AAA domain
    2.3e-05   25.0   0.0    0.00017   22.2   0.0    2.0  2  AAA_18           AAA domain
    4.6e-05   22.9   0.0       0.27   10.6   0.0    2.4  2  TniB             Bacterial TniB protein
    0.00015   21.5   0.0    0.00045   20.0   0.0    1.8  2  AAA_24           AAA domain
    0.00036   20.0   0.2    0.00092   18.6   0.1    1.7  1  Mg_chelatase     Magnesium chelatase, subunit ChlI
    0.00073   19.7   0.0      0.002   18.3   0.0    1.8  1  AAA_33           AAA domain
      0.001   19.4   0.0     0.0034   17.6   0.0    1.9  2  AAA_28           AAA domain
      0.001   19.5   0.0     0.0022   18.3   0.0    1.7  1  RNA_helicase     RNA helicase
     0.0011   18.8   0.0     0.0023   17.7   0.0    1.6  1  IstB_IS21        IstB-like ATP binding protein
     0.0011   19.0   0.2     0.0036   17.2   0.1    1.8  2  Rad17            Rad17 P-loop domain
     0.0011   19.1   0.0     0.0028   17.8   0.0    1.7  1  AAA_2            AAA domain (Cdc48 subfamily)
     0.0043   17.2   0.0      0.011   15.8   0.0    1.7  1  Sigma54_activ_2  Sigma-54 interaction domain
     0.0058   16.4   0.0      0.019   14.7   0.0    1.9  1  Sigma54_activat  Sigma-54 interaction domain
     0.0069   16.0   0.8       0.14   11.7   0.1    2.6  2  AAA_25           AAA domain
     0.0073   16.2   0.2      0.029   14.3   0.1    2.0  2  NACHT            NACHT domain
     0.0083   16.0   0.0      0.015   15.1   0.0    1.4  1  Bac_DnaA         Bacterial dnaA  protein
     0.0092   15.7   0.0      0.097   12.4   0.0    2.0  2  Viral_helicase1  Viral (Superfamily 1) RNA helicase
  ------ inclusion threshold ------
       0.01   15.6   0.1      0.029   14.2   0.0    1.8  1  AAA_lid_3        AAA+ lid domain
      0.012   15.2   0.0      0.031   13.8   0.0    1.7  1  AAA_7            P-loop containing dynein motor region
      0.012   16.0   0.1      0.047   14.1   0.0    2.0  2  AAA_17           AAA domain
      0.013   14.8   0.0       0.97    8.7   0.0    2.5  2  ATPase           KaiC
      0.018   15.1   0.1       0.12   12.3   0.0    2.0  2  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
      0.021   15.4   0.2      0.044   14.3   0.0    1.9  1  ABC_tran         ABC transporter
      0.022   14.6   0.7        3.3    7.4   0.4    2.3  2  AAA_21           AAA domain, putative AbiEii toxin, Type IV T
      0.028   14.3   0.1       0.14   12.1   0.0    2.0  2  ATPase_2         ATPase domain predominantly from Archaea
      0.035   13.8   0.0        0.3   10.7   0.0    2.2  2  Guanylate_kin    Guanylate kinase
      0.038   13.9   0.0       0.14   12.0   0.0    2.0  2  AAA_3            ATPase family associated with various cellul
      0.039   13.2   0.0      0.073   12.3   0.0    1.3  1  Zeta_toxin       Zeta toxin
      0.045   13.6   0.0       0.09   12.6   0.0    1.6  1  CPT              Chloramphenicol phosphotransferase-like prot
       0.05   13.3   0.0      0.063   12.9   0.0    1.2  1  ATP-synt_ab      ATP synthase alpha/beta family, nucleotide-b
      0.059   12.5   0.0        0.1   11.7   0.0    1.3  1  Parvo_NS1        Parvovirus non-structural protein NS1
       0.07   13.3   0.4       0.32   11.1   0.0    2.2  2  SKI              Shikimate kinase
      0.074   12.8   0.1       0.28   10.9   0.0    1.9  2  AAA_11           AAA domain
      0.094   11.9   0.1        0.2   10.8   0.0    1.6  1  TIP49            TIP49 P-loop domain
      0.099   11.8   0.0       0.18   11.0   0.0    1.4  1  DUF815           Protein of unknown function (DUF815)


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       7.9   3.6e+03      38      73 ..      43      76 ..      12      84 .. 0.60
   2 !  129.6   0.0   2.2e-40   9.8e-38       1     131 [.     128     256 ..     128     257 .. 0.98

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 7.9
                STTHHHHHHHHHHHHHHHTS.TSEEEEEETGGGHHHH CS
         AAA 38 yvgesekkirelfkeakeka.kpsilfiDEidalaks 73
                +v++s +k+++  +e      +   + +DE ++++ s
  EPX72055.1 43 TVSKSRQKLEDWAEEH---VrEIETVELDEYEQMVAS 76
                3333333333333331...123356666776666655 PP

  == domain 2  score: 129.6 bits;  conditional E-value: 2.2e-40
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTS CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkk 99 
                 +llyGppG+GKT+laka+ak+++++f+++s+  l++k++ges+k + +lf+ a++ + psi+fiDEid + ++r+++++e   ++ +++++++dg+ + 
  EPX72055.1 128 LLLYGPPGCGKTMLAKALAKQSNATFINVSVGLLTDKWFGESNKLVDALFSLARKLE-PSIIFIDEIDTFLRQRQRTDHEAMAQIKAEFMSMWDGLLSG 225
                 69******************************************************8.***************************************** PP

                 SSTEEEEEEESSGGGSTHHHHSTTSSEEEETT CS
         AAA 100 eskvivigatnrpdkldpallrgRfdrkieie 131
                 es+v+v+gatnrp ++d+a++ +R+ +++ i+
  EPX72055.1 226 ESRVLVLGATNRPGDIDEAIR-RRMPKVYSIP 256
                 *********************.7**9998887 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.3   0.0   2.7e-09   1.2e-06      36     153 ..     128     249 ..     119     255 .. 0.73

  Alignments for each domain:
  == domain 1  score: 28.3 bits;  conditional E-value: 2.7e-09
      RuvB_N  36 vllyGpPGlGkttlakiiakelgvklkitsgPvle.k....agdlaalltnleek...dvlfideihrlsraveevlysamedfrldiv.igkGpsars 125
                 +llyGpPG Gkt lak +ak+ ++++   s   l  k    ++ l+  l +l +k    ++fidei  + r+ +   + am  ++ + + + +G  +  
  EPX72055.1 128 LLLYGPPGCGKTMLAKALAKQSNATFINVSVGLLTdKwfgeSNKLVDALFSLARKlepSIIFIDEIDTFLRQRQRTDHEAMAQIKAEFMsMWDGLLSGE 226
                 79*******************99998777766664122222577888888776543338*************999999999999888762344544443 PP

      RuvB_N 126 ikldlpkftlvgattragllssPlrdrf 153
                       +  ++gat r g + + +r r+
  EPX72055.1 227 S-----RVLVLGATNRPGDIDEAIRRRM 249
                 3.....3345677777777777777665 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.2   7.6e-09   3.4e-06       2     138 .]     128     249 ..     127     249 .. 0.82

  Alignments for each domain:
  == domain 1  score: 27.1 bits;  conditional E-value: 7.6e-09
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------.G-SEEEEESGGG--HHHHHHHHHHHHSSEEE..-S CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar.egeilvlDEveraesevlnsLlslleerrllleeg 99 
                 +lL GppG+gK++la+ la+  +++ + ++ + ++ +++ +g+ +      +lvd  +  a + e++i+++DE+++  ++ + + +  + + +  ++++
  EPX72055.1 128 LLLYGPPGCGKTMLAKALAK--QSNATFINVSVGLLTDKWFGESN------KLVDALFSLARKlEPSIIFIDEIDTFLRQRQRTDHEAMAQIKAEFMSM 218
                 89****************99..56667788888999999999999......7898888755559***********999999999999998877666655 PP

                 ..SSEEE---......-EEEEEESS--.-TT-TTHHHHTT- CS
       AAA_5 100 ..gelvkaknddllerfrviatanpldrslnelspalrsRf 138
                   g l ++++      + v++++n++     ++++a+r+R+
  EPX72055.1 219 wdGLLSGESR------VLVLGATNRPG----DIDEAIRRRM 249
                 2044444444......99999999999....9999999997 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0       2.6   1.2e+03      58     103 ..      27      73 ..      10     103 .. 0.74
   2 !   19.8   0.6   1.6e-06   0.00072       7      43 ..     127     154 ..     121     218 .. 0.80
   3 ?    1.1   0.0         1   4.5e+02      37      71 ..     247     290 ..     230     315 .. 0.72

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 2.6
      AAA_22  58 rellralglelkaerlsseellealeqalrarav.ielliiDEaqhl 103
                 r+ll+ l+  + ++ ++ +  +++le+ ++++ + ie + +DE + +
  EPX72055.1  27 RKLLSSLDPYRQKQQDTVSKSRQKLEDWAEEHVReIETVELDEYEQM 73 
                 66777777666666777777778888888888778888888888776 PP

  == domain 2  score: 19.8 bits;  conditional E-value: 1.6e-06
      AAA_22   7 ilvvtGesGtGKTtllrrlleqldeeakaeeerpevv 43 
                  l+++G++G+GKT+l++ l++q          +++++
  EPX72055.1 127 GLLLYGPPGCGKTMLAKALAKQS---------NATFI 154
                 589******************98.........55555 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 1
      AAA_22  37 eerpevvfvtlpsstsskdllrellralglelka.........e 71 
                 ++ p+v+++ lp s+ ++++l+  l++++l+ +          +
  EPX72055.1 247 RRMPKVYSIPLPTSSQRRKILELYLKNVKLDENFdwnavvastA 290
                 36788999********************9988875555444432 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0   7.2e-07   0.00032      22      51 ..     123     152 ..     115     165 .. 0.84
   2 ?    3.5   0.2      0.18        81     123     156 ..     173     206 ..     167     232 .. 0.71

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 7.2e-07
      AAA_16  22 grpelvllsGesGvGKsslvrellralekd 51 
                 ++p  +ll+G++G+GK+ l+++l+++ +++
  EPX72055.1 123 SSPKGLLLYGPPGCGKTMLAKALAKQSNAT 152
                 57899*******************977655 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.18
      AAA_16 123 lkrllallsrderplvlvlDdlqwadeaslql.la 156
                 + +l++l+++  +p ++++D+++ +  + +    +
  EPX72055.1 173 VDALFSLARK-LEPSIIFIDEIDTFLRQRQRTdHE 206
                 3444588888.556*********766555444444 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.0   4.5e-08     2e-05       4      76 ..     127     196 ..     124     257 .. 0.84

  Alignments for each domain:
  == domain 1  score: 24.6 bits;  conditional E-value: 4.5e-08
      AAA_14   4 ilvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelileklkeekktylflDEiqev 76 
                  l++ G+  +GKT+l+k l+k++      ++ +++   +dk + +++kl +++++++++ + +++f+DEi   
  EPX72055.1 127 GLLLYGPPGCGKTMLAKALAKQSN---ATFINVSVGLLTDKWFGESNKLVDALFSLARKLEPSIIFIDEIDTF 196
                 57899***************9999...99999999999999988888999999999777799********865 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0       2.2   9.8e+02      25      89 ..      37     104 ..      14     115 .. 0.60
   2 !   22.2   0.0   3.7e-07   0.00017       2      66 ..     129     213 ..     128     240 .. 0.75

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 2.2
      AAA_18  25 gvnlrdvakenglllevdpe...aldeskrldedkldklldaleenssaleegknlvidghlaelese 89 
                  ++ +d++++++  le+++e      e+ +lde  ++++++++  +  + + g+   +d h+++l+++
  EPX72055.1  37 RQKQQDTVSKSRQKLEDWAEehvREIETVELDEYEQMVASQLVLPSEINVAFGDIAGMDEHVNHLFQD 104
                 45555555555555555555534334455566666666666666655556666666777777777766 PP

  == domain 2  score: 22.2 bits;  conditional E-value: 3.7e-07
      AAA_18   2 lltGtpGvGKttlakeLskrlgf.....................gvnlrdvakenglllevdpealdeskrldedkldklldalee 66 
                 ll G+pG+GKt lak+L+k  +                      ++ l ++a++ ++++ + +e +d ++r ++  +++++ ++++
  EPX72055.1 129 LLYGPPGCGKTMLAKALAKQSNAtfinvsvglltdkwfgesnklVDALFSLARKLEPSIIFIDE-IDTFLRQRQRTDHEAMAQIKA 213
                 689**************99954478888989999999999999999999999999999999888.555555555555555554443 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0    0.0011      0.49      35      61 ..     125     151 ..     113     157 .. 0.87
   2 !   10.6   0.0   0.00059      0.27     106     147 ..     171     212 ..     164     215 .. 0.90

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.0011
        TniB  35 mpnlllvGdsnnGKtmivekFarlhpp 61 
                 ++ lll+G++ +GKtm+++  a++ ++
  EPX72055.1 125 PKGLLLYGPPGCGKTMLAKALAKQSNA 151
                 5789***************99988765 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00059
        TniB 106 kleqqvlrllrelkvrvLiiDEihnllagsarkqreflnalk 147
                 kl ++  +l r+l++ ++ iDEi+ +l+ ++r+ +e+++++k
  EPX72055.1 171 KLVDALFSLARKLEPSIIFIDEIDTFLRQRQRTDHEAMAQIK 212
                 6667788999******************************99 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       4.7   2.1e+03      59      77 ..      41      73 ..       9      78 .. 0.60
   2 !   20.0   0.0     1e-06   0.00045       5      79 ..     128     198 ..     124     245 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 4.7
      AAA_24 59 l..............aaeladyktlviDtidel 77
                               +++ ++++t+ +D ++++
  EPX72055.1 41 QdtvsksrqkledwaEEHVREIETVELDEYEQM 73
                033333333334445666677777777776666 PP

  == domain 2  score: 20.0 bits;  conditional E-value: 1e-06
      AAA_24   5 iliyGpsgiGKTtlakel..gpkplfidtekGlksldadkfpdieswedfldevvelaaeladyktlviDtidelee 79 
                 +l+yGp+g GKT+lak l  + ++ fi++  Gl  +d + ++     ++++d++ +la++l+  ++++iD id + +
  EPX72055.1 128 LLLYGPPGCGKTMLAKALakQSNATFINVSVGL-LTDKWFGE----SNKLVDALFSLARKLE-PSIIFIDEIDTFLR 198
                 79******************9********9999.44555544....5678888888877777.68999999998866 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.1   2.1e-06   0.00092      25      43 ..     128     146 ..     123     152 .. 0.91

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 2.1e-06
  Mg_chelatase  25 lllvGppGsGKtmlakrlp 43 
                   lll+GppG+GKtmlak+l+
    EPX72055.1 128 LLLYGPPGCGKTMLAKALA 146
                   89**************996 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0   4.4e-06     0.002       3      33 ..     129     168 ..     128     220 .. 0.71

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 4.4e-06
      AAA_33   3 llvGlpGsGKstlaerllkklgavllssdt.........l 33 
                 ll G+pG+GK+ la+ l+k+  a++++  +         +
  EPX72055.1 129 LLYGPPGCGKTMLAKALAKQSNATFINVSVglltdkwfgE 168
                 688*******************988887665544444441 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1       7.3   3.2e+03     126     152 ..      36      62 ..      26      77 .. 0.60
   2 !   17.6   0.0   7.6e-06    0.0034       4      48 ..     130     174 ..     128     219 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 7.3
      AAA_28 126 eRredleereaiderlrealrelgipv 152
                  R+++++   ++ ++l+++ +e+  ++
  EPX72055.1  36 YRQKQQDTVSKSRQKLEDWAEEHVREI 62 
                 555555555666666666655543333 PP

  == domain 2  score: 17.6 bits;  conditional E-value: 7.6e-06
      AAA_28   4 itGgestGKTtlleaLaargypvvpEaareileeklakgedalpw 48 
                 + G++++GKT l++aLa++   ++  +   +l++k++ + ++l +
  EPX72055.1 130 LYGPPGCGKTMLAKALAKQSNATFINVSVGLLTDKWFGESNKLVD 174
                 78*****************99999999999999998887776654 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0     5e-06    0.0022       2      27 ..     129     159 ..     128     220 .. 0.77

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 5e-06
  RNA_helicase   2 wlyGpsgeGKStlakeLakallkkl.....k 27 
                   +lyGp+g+GK++lak Lak+   ++     +
    EPX72055.1 129 LLYGPPGCGKTMLAKALAKQSNATFinvsvG 159
                   79****************9988666555554 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0     5e-06    0.0023      44      74 ..     122     152 ..     116     204 .. 0.82

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 5e-06
   IstB_IS21  44 iekkenivllGpsGvGKshlaialgveavra 74 
                 +++ ++++l Gp+G GK+ la al+++  ++
  EPX72055.1 122 LSSPKGLLLYGPPGCGKTMLAKALAKQSNAT 152
                 5666789******************987554 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.1   8.1e-06    0.0036      47      78 ..     127     158 ..     116     174 .. 0.81
   2 ?   -2.4   0.0       8.4   3.8e+03     134     152 ..     186     204 ..     180     218 .. 0.58

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 8.1e-06
       Rad17  47 iLLisGPsGCgkstvvkvLskelgiklrewln 78 
                  LL+ GP+GCgk+   k L+k+    +++ + 
  EPX72055.1 127 GLLLYGPPGCGKTMLAKALAKQSNATFINVSV 158
                 48999****************99888776655 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 8.4
       Rad17 134 klilvedlPnkfyrdsdal 152
                 ++i+++++     +  ++ 
  EPX72055.1 186 SIIFIDEIDTFLRQRQRTD 204
                 6777777764433333433 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   6.3e-06    0.0028       7      83 ..     129     199 ..     125     220 .. 0.76

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 6.3e-06
                 EEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTSEEEEETGGG---- CS
       AAA_2   7 lllgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegGivllDEidKihpk 83 
                 ll gp g+Gkt+lakala+  ++    ++i +    l+   +     ++l+ a     ++ e  i+++DEid   ++
  EPX72055.1 129 LLYGPPGCGKTMLAKALAKQSNA----TFINVSVGLLTD--KWFGESNKLVDALFSLARKLEPSIIFIDEIDTFLRQ 199
                 789******************95....666666555555..44444555555556677888999********87774 PP

>> Sigma54_activ_2  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   2.5e-05     0.011      20      87 ..     124     202 ..     113     215 .. 0.72

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 2.5e-05
                      -SS-EEEEEETT--HHHHHHCC--TTS-EE--SSTTHHHH-H............HHHHHHTTTSEEEEEE-TT--HHHHH CS
  Sigma54_activ_2  20 sklpvfltGekGsgkelvArlLhknsgpwleifvverlaklp............ldlleqakggtLylkdiadlskaeqk 87 
                      s   ++l G++G+gk++ A++L+k+s      + v  l +               +l  ++++ ++++ +i+ + ++ q 
       EPX72055.1 124 SPKGLLLYGPPGCGKTMLAKALAKQSNATFINVSVGLLTD-KwfgesnklvdalFSLARKLEPSIIFIDEIDTFLRQRQR 202
                      566799******************9988444333333332.134444445444477777789999999999999998886 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   4.1e-05     0.019      11      61 ..     114     161 ..     109     236 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 4.1e-05
                      HHHHHHHHCTSSS-EEEECSTTSSHHHHHHHHHHHSTTTTS-EEEEETTTS CS
  Sigma54_activat  11 lleqikkvaktdlsvlitGesGtGKellaraiheaskrkekpfvavncaai 61 
                      ++++ + + +++  +l+ G  G+GK++la+a+ ++s+   + f++v ++ +
       EPX72055.1 114 VFNTHSDLLSSPKGLLLYGPPGCGKTMLAKALAKQSN---ATFINVSVGLL 161
                      66677778889999*****************988776...77888877654 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.1   0.00031      0.14      36      54 ..     128     146 ..     117     149 .. 0.88
   2 ?    1.7   0.0      0.38   1.7e+02     129     168 ..     172     211 ..     155     232 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00031
      AAA_25  36 allaGapgtGKttlaldla 54 
                  ll+G+pg+GKt+la  la
  EPX72055.1 128 LLLYGPPGCGKTMLAKALA 146
                 58************98876 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.38
      AAA_25 129 dvdaleaaieevegvrlvviDplsralgg.densnsdvgal 168
                  vdal   +++  ++  + iD ++ +l+  + +++++++++
  EPX72055.1 172 LVDALFSLARKL-EPSIIFIDEIDTFLRQrQRTDHEAMAQI 211
                 577888888885.59***********999877777776554 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.1   6.6e-05     0.029       3      22 ..     128     147 ..     126     153 .. 0.89
   2 ?   -1.1   0.0       3.4   1.5e+03      81     100 ..     185     206 ..     159     273 .. 0.59

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 6.6e-05
                 EEEEC-TTTCHHHHHHHHHH CS
       NACHT   3 vilqGeaGsGKTtLlqklal 22 
                 ++l G++G+GKT+L++ la 
  EPX72055.1 128 LLLYGPPGCGKTMLAKALAK 147
                 5899************9997 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 3.4
                 CCEEEEEE-STT-SS-TCH.... CS
       NACHT  81 erlLlilDglDelvtdlgq...k 100
                  ++   +D +D + ++ +    +
  EPX72055.1 185 PSII-FIDEIDTFLRQRQRtdhE 206
                 3333.357777776665554432 PP

>> Bac_DnaA  Bacterial dnaA  protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   3.4e-05     0.015      37     120 ..     128     208 ..     121     285 .. 0.72

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 3.4e-05
                 EEEE-SSSSSHHHHHHHHHHHHHHHSSSS-EEEEEHHHH..HHHHHHHHHTT-HHHHHHHHTT-SEEEEE-GG.GGTT-HHHHHHHH CS
    Bac_DnaA  37 lfiygevGlGktHLlkaignevlenapelrvvYltaeeF..lnelvkalrdkkaeefkeklrkvDvLliDDiq.flagkektqeelf 120
                 l++yg+ G Gkt L ka++++  +++ +  v  lt + F   n+lv+al +     + +kl +  ++ iD+i  fl ++++t++e +
  EPX72055.1 128 LLLYGPPGCGKTMLAKALAKQSNATFINVSVGLLTDKWFgeSNKLVDALFS-----LARKL-EPSIIFIDEIDtFLRQRQRTDHEAM 208
                 89********************************99999444677777654.....44444.3457778888547777777665533 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.62   2.8e+02      38      97 ..      39      91 ..      24     121 .. 0.73
   2 !   12.4   0.0   0.00022     0.097       5      71 ..     132     193 ..     128     196 .. 0.61

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.62
  Viral_helicase1 38 gkpklpnlsvrtvdsflmalvkstkgkililDEylllhaGyilllaalskaklvilfGDp 97
                       +++ ++s   ++++ +  v++   +++ lDEy ++ a ++ l      ++++++fGD 
       EPX72055.1 39 KQQDTVSKSRQKLEDWAEEHVRE--IETVELDEYEQMVASQLVL-----PSEINVAFGDI 91
                     44666677777788888888876..89999****8887655555.....66789999995 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 0.00022
  Viral_helicase1   5 GvpGcGKStlirkllrtsliltvnrptaelltegkpklpnlsvrtvdsflmalvkstkgkililDEy 71 
                      G pGcGK+ l + l+++s    +n++   l  +++ ++++l v  + s+  +l       i+++DE+
       EPX72055.1 132 GPPGCGKTMLAKALAKQSNATFINVSVGLLTDKWFGESNKL-VDALFSLARKLE----PSIIFIDEI 193
                      78***************633333444344444455444444.333444444443....458999986 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   6.4e-05     0.029       1      32 [.     279     310 ..     279     327 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 6.4e-05
   AAA_lid_3   1 dvdlkeLAerTeGySGADlaalcreAallAlr 32 
                 ++d++++++ T+G SG  +++ cr A  +  r
  EPX72055.1 279 NFDWNAVVASTAGLSGSYIKEACRSALSVPRR 310
                 689***********************876655 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   6.9e-05     0.031      29      65 ..     121     156 ..     113     172 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 6.9e-05
       AAA_7  29 llknkkpvllvGptGtGKtviikdllkkldkekylsl 65 
                 ll++ k +ll+Gp G+GKt+++k l k+ +  +++ +
  EPX72055.1 121 LLSSPKGLLLYGPPGCGKTMLAKALAKQSN-ATFINV 156
                 7888899****************9998887.565555 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0    0.0001     0.047       1      26 [.     131     156 ..     131     164 .. 0.91
   2 ?   -1.7   0.0       8.2   3.7e+03      51      68 ..     197     214 ..     168     229 .. 0.64

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 0.0001
                 EE-TTSSHHHHHHHHHHHHTEEEEEH CS
      AAA_17   1 lGgPGsGKgtqceklvekygfthlsa 26 
                 +G+PG+GK+ +++ l+++ + t+++ 
  EPX72055.1 131 YGPPGCGKTMLAKALAKQSNATFINV 156
                 7******************9999876 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 8.2
                 HHHHHHHHHHHHHHHHHH CS
      AAA_17  51 leekkelqkeaaekiaee 68 
                 l+++++++ ea+++i+ e
  EPX72055.1 197 LRQRQRTDHEAMAQIKAE 214
                 455566666666666654 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.0    0.0022      0.97      16      42 ..     122     148 ..      90     158 .. 0.68
   2 ?    3.3   0.1     0.097        44     105     147 ..     170     211 ..     159     221 .. 0.77

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0022
      ATPase  16 ipegrvvlitGepGtGKtifalqFlik 42 
                 + + +  l++G pG+GKt++a+  + +
  EPX72055.1 122 LSSPKGLLLYGPPGCGKTMLAKALAKQ 148
                 55666789************9876655 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.097
      ATPase 105 eelieelaeaikeikakrvviDsitglayeekeavaReilrql 147
                 ++l++ l +  ++++ + + iD i+++  ++++ +  e + q+
  EPX72055.1 170 NKLVDALFSLARKLEPSIIFIDEIDTF-LRQRQRTDHEAMAQI 211
                 6899999999****************9.555555555555555 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1       1.9   8.5e+02      66     102 ..      30      70 ..      21      90 .. 0.54
   2 ?   12.3   0.0   0.00027      0.12      20      46 ..     126     152 ..     104     158 .. 0.80

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 1.9
                 EEEEE-TT-SSTHHH..HHCTTCCCCSTS..CEEEEETGGG CS
        TsaE  66 lyHfDlYRledeeel..eelgleeyleee..avvlvEWpek 102
                 l  +D YR ++++ +   + +le+  ee+  ++  vE  e 
  EPX72055.1  30 LSSLDPYRQKQQDTVskSRQKLEDWAEEHvrEIETVELDEY 70 
                 66689999877666522344556655433333444444443 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 0.00027
                 EEEEEEESTTSSHHHHHHHHHHHTT-- CS
        TsaE  20 dvilLeGdLGaGKTtlvrglakalgve 46 
                 + +lL+G+ G+GKT+l+++lak+ + +
  EPX72055.1 126 KGLLLYGPPGCGKTMLAKALAKQSNAT 152
                 4499*****************998765 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   9.8e-05     0.044      14      38 ..     128     152 ..     122     294 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 9.8e-05
                 EEEEESTTSSHHHHHHHHTTSS--S CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  14 vaivGenGaGKStLlkllagllkpt 38 
                 + + G+ G+GK+ L+k+la++++ t
  EPX72055.1 128 LLLYGPPGCGKTMLAKALAKQSNAT 152
                 5789***************998764 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0     0.032        15       3      45 ..     129     165 ..     128     172 .. 0.75
   2 ?    7.4   0.4    0.0073       3.3     246     270 ..     174     197 ..     167     202 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.032
      AAA_21   3 vliGpNgsGKSnLLdaldllarldrdvegltdelsggggirki 45 
                 +l+Gp g+GK+ L +al      ++ ++ + ++ s g  ++k+
  EPX72055.1 129 LLYGPPGCGKTMLAKAL------AKQSNATFINVSVGLLTDKW 165
                 69***************......66666666666666666555 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0073
      AAA_21 246 alltallralkkgsllliDEpEngL 270
                   l +l+r l++ s+++iDE++++L
  EPX72055.1 174 DALFSLARKLEP-SIIFIDEIDTFL 197
                 567889999988.*********998 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00031      0.14      23      44 ..     128     149 ..     123     158 .. 0.85
   2 ?   -1.1   0.0       3.4   1.5e+03     108     128 ..     174     194 ..     147     231 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00031
    ATPase_2  23 yfiYGpegsGKtaLlkeiienl 44 
                 +++YGp g+GKt L k +++++
  EPX72055.1 128 LLLYGPPGCGKTMLAKALAKQS 149
                 579*************998876 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 3.4
    ATPase_2 108 lllekikkkgkkiiiiiDelq 128
                 ++l ++ +k    ii+iDe+ 
  EPX72055.1 174 DALFSLARKLEPSIIFIDEID 194
                 445556666666788888875 PP

>> Guanylate_kin  Guanylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00067       0.3       3      38 ..     126     162 ..     124     169 .. 0.88
   2 ?    0.2   0.0       1.2   5.2e+02     112     154 ..     182     215 ..     176     227 .. 0.60

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00067
                    SEEEEESTTTSSHHHHHHHHHHHSTTTEE.E--EEES CS
  Guanylate_kin   3 rpvvlvgpsgaGksslkkaLlselpekfg.vsvshtT 38 
                    + + l gp g Gk +l kaL ++ + +f  vsv   T
     EPX72055.1 126 KGLLLYGPPGCGKTMLAKALAKQSNATFInVSVGLLT 162
                    66899***********************559997666 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 1.2
                    TTTEEEEEEEESSHHHHHHHHTTSSSSHHHHHHHHHHHHHHHH CS
  Guanylate_kin 112 elspiivFikppslkelqrrlksrgkeqeeklakrlaaaekel 154
                    +l+p i+Fi     +e+++ l++r +   e     +a++++e+
     EPX72055.1 182 KLEPSIIFI-----DEIDTFLRQRQRTDHEA----MAQIKAEF 215
                    789999999.....55666655555444443....33444444 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       6.5   2.9e+03      51      74 ..      64      87 ..      53      91 .. 0.73
   2 ?   12.0   0.0   0.00032      0.14       2      30 ..     128     156 ..     127     219 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 6.5
       AAA_3 51 ekefefkkGpvfanllladeinra 74
                + e++  +  v ++l+l  ein a
  EPX72055.1 64 TVELDEYEQMVASQLVLPSEINVA 87
                455555666788999999999976 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 0.00032
       AAA_3   2 vllegvPGlaktllvkalakaldlefkri 30 
                 +ll g PG +kt+l+kalak+ +++f  +
  EPX72055.1 128 LLLYGPPGCGKTMLAKALAKQSNATFINV 156
                 6899*****************99998665 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   0.00016     0.073      14      43 ..     123     150 ..     113     159 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00016
  Zeta_toxin  14 erPklillgGqpGAGKselaellkdelerq 43 
                 ++Pk +ll G pG+GK+ la++l+++   +
  EPX72055.1 123 SSPKGLLLYGPPGCGKTMLAKALAKQS--N 150
                 789********************9987..4 PP

>> CPT  Chloramphenicol phosphotransferase-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0    0.0002      0.09       5      40 ..     129     164 ..     126     210 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.0002
                 EEEE-TTSSHHHHHHHHHHHSSS-EEEEEHHHHHHH CS
         CPT   5 lLnGgsssGKsslaralqevldepwlhlgvDafvea 40 
                 lL G +  GK+ la+al ++++++++++ v  ++++
  EPX72055.1 129 LLYGPPGCGKTMLAKALAKQSNATFINVSVGLLTDK 164
                 899*************************99877665 PP

>> ATP-synt_ab  ATP synthase alpha/beta family, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   0.00014     0.063      18      48 ..     129     159 ..     124     295 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.00014
                  EEEESTTSSHHHHHHHHHHHSSTSSEEEEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab  18 lipgafgvGktvisqslskqsnsddaiiyvg 48 
                  l+ g  g+Gkt+++++l+kqsn++ + + vg
   EPX72055.1 129 LLYGPPGCGKTMLAKALAKQSNATFINVSVG 159
                  678999**************98774444444 PP

>> Parvo_NS1  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00022       0.1     117     138 ..     128     149 ..     123     154 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00022
   Parvo_NS1 117 vwfyGpantGktnlaeaIakav 138
                 +++yGp+ +Gkt+la+a+ak +
  EPX72055.1 128 LLLYGPPGCGKTMLAKALAKQS 149
                 589****************976 PP

>> SKI  Shikimate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1       7.5   3.4e+03      33      53 ..      45      65 ..      26      79 .. 0.52
   2 ?   11.1   0.0   0.00071      0.32       1      22 [.     134     155 ..     134     165 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 7.5
                S-HHHHHHHHHHHHHHHHHHH CS
         SKI 33 ksiaeifeeegeegFrelEse 53
                 + ++ +e+  ee  re E+ 
  EPX72055.1 45 SKSRQKLEDWAEEHVREIETV 65
                333444444444444444444 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.00071
                 TTSSHHHHHHHHHHHHTSEEEE CS
         SKI   1 mGaGKstvGkllAkklglefiD 22 
                 +G+GK+ ++k+lAk+ + +fi 
  EPX72055.1 134 PGCGKTMLAKALAKQSNATFIN 155
                 6*******************97 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.1       2.8   1.2e+03     165     191 ..      39      65 ..      21      80 .. 0.48
   2 ?   10.9   0.0   0.00063      0.28      14      43 ..     122     151 ..     116     249 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 2.8
      AAA_11 165 qerrklkkerkelskeleeaeesleee 191
                 +++++++k+r++l++  ee+ +++e+ 
  EPX72055.1  39 KQQDTVSKSRQKLEDWAEEHVREIETV 65 
                 222233333333333333333333333 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00063
      AAA_11  14 lseseitliqGPPGtgKTktivellsqlls 43 
                 ls+++  l+ GPPG+gKT    +l +q + 
  EPX72055.1 122 LSSPKGLLLYGPPGCGKTMLAKALAKQSNA 151
                 66777789**********999999999853 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00044       0.2      50      75 ..     125     150 ..     119     183 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00044
                 XXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  50 GravLlaGpsgtGktalaiaiskelg 75 
                  +++Ll Gp+g Gkt la a++k+ +
  EPX72055.1 125 PKGLLLYGPPGCGKTMLAKALAKQSN 150
                 589*******************9865 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0    0.0004      0.18      55     116 ..     127     193 ..     115     248 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.0004
      DUF815  55 nvLLwGarGtGKSslvkallneyaeegLrl..ievekedlkelpklvellrerperf...ilfvDDL 116
                  +LL+G  G+GK  l kal ++ +++ + +    ++ +   e +klv++l + ++++   i+f+D +
  EPX72055.1 127 GLLLYGPPGCGKTMLAKALAKQSNATFINVsvGLLTDKWFGESNKLVDALFSLARKLepsIIFIDEI 193
                 589******************9999885542034455566777777777665554433338888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (354 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       741  (0.0413297); expected 358.6 (0.02)
Passed bias filter:                      641  (0.0357521); expected 358.6 (0.02)
Passed Vit filter:                       122  (0.00680462); expected 17.9 (0.001)
Passed Fwd filter:                        40  (0.00223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              40  [number of targets reported over threshold]
# CPU time: 0.63u 0.32s 00:00:00.95 Elapsed: 00:00:00.46
# Mc/sec: 2335.04
//
Query:       EPX72056.1  [L=197]
Description: THO complex subunit 7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.7e-19   70.4   9.5    1.7e-19   70.4   9.5    2.0  2  THOC7            Tho complex subunit 7
     0.0028   17.8  16.6      0.004   17.3  16.6    1.3  1  Mod_r            Modifier of rudimentary (Mod(r)) protein
     0.0032   17.7   1.2     0.0032   17.7   1.2    2.1  2  TcdB_N           TcdB toxin N-terminal helical domain
     0.0036   17.0  18.4     0.0061   16.2  18.4    1.3  1  Lebercilin       Ciliary protein causing Leber congenital ama
     0.0053   17.1   0.4       0.01   16.2   0.4    1.5  1  DNA_ligase_A_N   DNA ligase N terminus
     0.0057   16.5  18.7     0.0088   15.9  18.7    1.3  1  ERM              Ezrin/radixin/moesin family
  ------ inclusion threshold ------
       0.02   15.0   2.4       0.02   15.0   2.4    3.5  4  bZIP_1           bZIP transcription factor
      0.063   12.9   3.9      0.082   12.5   3.9    1.1  1  AIPR             AIPR protein
      0.066   13.3  18.5        0.1   12.7  18.5    1.3  1  UPF0242          Uncharacterised protein family (UPF0242) N-t
      0.098   12.7  18.8        1.5    8.9   9.8    2.3  2  BRE1             BRE1 E3 ubiquitin ligase
       0.18   12.2  13.3        2.1    8.7   2.2    2.9  2  Siah-Interact_N  Siah interacting protein, N terminal
       0.23   11.5  18.5        2.9    8.0   9.2    2.2  2  ADIP             Afadin- and alpha -actinin-Binding
       0.31   11.5  14.6       0.49   10.8  14.3    1.5  1  CENP-H           Centromere protein H (CENP-H)
        0.4   10.9   7.6       0.64   10.2   7.3    1.5  1  PHM7_cyt         Cytosolic domain of 10TM putative phosphate 
       0.41   10.0   7.6       0.54    9.6   7.6    1.3  1  DUF4407          Domain of unknown function (DUF4407)
       0.51    9.5  12.3       0.43    9.8   1.2    2.1  2  TMPIT            TMPIT-like protein
       0.53    8.8   3.0       0.59    8.6   3.0    1.1  1  FUSC             Fusaric acid resistance protein family
       0.54    9.1   7.7       0.64    8.9   7.7    1.2  1  LMBR1            LMBR1-like membrane protein
       0.65   10.4  14.8       0.42   11.1   1.1    3.0  3  Streptin-Immun   Lantibiotic streptin immunity protein
       0.87   10.1  16.7       0.56   10.7   7.6    2.3  2  DUF16            Protein of unknown function DUF16
        1.4    8.9  12.2          2    8.5  12.2    1.1  1  Asp-B-Hydro_N    Aspartyl beta-hydroxylase N-terminal region
        1.5    7.4  11.2        1.9    7.0  11.2    1.1  1  FapA             Flagellar Assembly Protein A
        1.5    8.6  15.5          2    8.2  14.4    1.6  2  DUF724           Protein of unknown function (DUF724)
        1.6    6.6   8.4        1.9    6.3   8.4    1.1  1  V_ATPase_I       V-type ATPase 116kDa subunit family
        1.6    8.8  19.5       0.17   11.9   3.4    2.9  2  TMF_DNA_bd       TATA element modulatory factor 1 DNA binding
        1.7    8.8  11.9       0.39   10.8   1.2    2.5  2  Swi5             Swi5
        2.6    8.2  21.6        1.1    9.4  11.6    2.2  2  CENP-Q           CENP-Q, a CENPA-CAD centromere complex subun
        2.8    8.2  15.1         15    5.8  15.1    1.9  1  zf-C4H2          Zinc finger-containing protein
        3.9    7.8  26.9        7.3    6.9   4.7    2.1  2  OmpH             Outer membrane protein (OmpH-like)
        6.7    7.1  16.4          5    7.5   6.9    2.3  2  DUF641           Plant protein of unknown function (DUF641)
        7.3    6.4  21.5       0.16   11.7   3.6    2.6  3  DivIC            Septum formation initiator


Domain annotation for each model (and alignments):
>> THOC7  Tho complex subunit 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.4   9.5     3e-22   1.7e-19       1     132 []       3     128 ..       3     128 .. 0.97
   2 !    7.2   2.4    0.0098       5.7      55      98 ..     127     170 ..     125     175 .. 0.69

  Alignments for each domain:
  == domain 1  score: 70.4 bits;  conditional E-value: 3e-22
       THOC7   1 eeliksRLlnveerplkrltkrllklltslaesteeeleqlkedllldfaafelsierlqllakanerereryeaekeeieseieavreeieelkaqLe 99 
                 e+ i+sRL   eerpl+rl++r+  ++++      ++ e+  ++l+ +faa      rlq+ +++  +e+  y+++ +++++  e+ ++ei++l+++L 
  EPX72056.1   3 EAAIRSRLNV-EERPLRRLISRCMGFTNE------KSDEASMKTLEIEFAAMSAFWLRLQMQLDTHGKEVSLYQNNLRKTQQDYEQEEKEISRLEQELL 94 
                 67899**998.**************9999......499999********************************************************** PP

       THOC7 100 earatranrkeydelaekItsnp.kpReeqeaql 132
                  a+++++  +eydela+ I+++  ++R eq +++
  EPX72056.1  95 LAQQEQEKQQEYDELAKPIMARGlRSRGEQLESI 128
                 *****************************98875 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0098
       THOC7  55 sierlqllakanerereryeaekeeieseieavreeieelkaqL 98 
                 si++l+   +  e+e ++ye++ ++ +++ e++ ++i+e ++ L
  EPX72056.1 127 SIAKLESAIQELEEENKNYEQQWNQRKENFEKIVQSIDEFRTLL 170
                 66777777777777777777777777777777777777776665 PP

>> Mod_r  Modifier of rudimentary (Mod(r)) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3  16.6   6.8e-06     0.004      40     140 ..      62     171 ..      29     174 .. 0.91

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 6.8e-06
       Mod_r  40 aeneslaeknlsl.epeleelrselqekleelkelekefeekeqeldell.........qkfspdallarLqtavaeaeeeSealaeeflegeieldeF 128
                  +++sl ++nl + ++++e++ +e++   +el  l ++ +ek+qe+del          ++  +    a+L+ a++e eee ++ ++++ + ++++++ 
  EPX72056.1  62 GKEVSLYQNNLRKtQQDYEQEEKEISRLEQELL-LAQQEQEKQQEYDELAkpimarglrSRGEQLESIAKLESAIQELEEENKNYEQQWNQRKENFEKI 159
                 4679999******999**********9999998.888889**********999999998888888999******************************* PP

       Mod_r 129 vkefkekRklyH 140
                 v++  e R+l H
  EPX72056.1 160 VQSIDEFRTLLH 171
                 **********99 PP

>> TcdB_N  TcdB toxin N-terminal helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.7       4.5   2.6e+03       8      20 ..      87      98 ..      70     111 .. 0.60
   2 !   17.7   1.2   5.5e-06    0.0032       7      49 ..     135     176 ..     129     186 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 4.5
                HHHHHHHHTTTTS CS
      TcdB_N  8 enleeklnklsee 20
                + le++l  l ++
  EPX72056.1 87 SRLEQEL-LLAQQ 98
                4566665.33222 PP

  == domain 2  score: 17.7 bits;  conditional E-value: 5.5e-06
                 HHHHHHHHHTTTTS-HHHHHHHHHHHHHHHHHHHHHSTT-TTH CS
      TcdB_N   7 lenleeklnklseeqskkkyellkklkkeidnYnnlykkekns 49 
                 + +lee++ k  e+q ++++e + k++ +id++++l  +++n 
  EPX72056.1 135 IQELEEEN-KNYEQQWNQRKENFEKIVQSIDEFRTLLHPSNNG 176
                 789****6.99999**********************9998886 PP

>> Lebercilin  Ciliary protein causing Leber congenital amaurosis disease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2  18.4   1.1e-05    0.0061      58     157 ..      54     159 ..      52     168 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.1e-05
  Lebercilin  58 LpqllarhneEvrvlrerlRksqekerelekklkekeael......lrlkdklkklkkLsedknLaereeLqkkLeeleakleekeekikeLerklele 150
                 L++ l+ h +Ev  ++++lRk+q+ +++ ek++ + e+el      ++ ++++++l k  +++ L+ r e  + +++le+ ++e ee++k+ e++ ++ 
  EPX72056.1  54 LQMQLDTHGKEVSLYQNNLRKTQQDYEQEEKEISRLEQELllaqqeQEKQQEYDELAKPIMARGLRSRGEQLESIAKLESAIQELEEENKNYEQQWNQR 152
                 78899*********************************993332222334445556666679************************************* PP

  Lebercilin 151 eksfrrq 157
                 +++f++ 
  EPX72056.1 153 KENFEKI 159
                 ***9875 PP

>> DNA_ligase_A_N  DNA ligase N terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.4   1.8e-05      0.01      55     138 ..       7     130 ..       3     171 .. 0.68

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.8e-05
                     -.-----HHHHHHHHHHHHT--HHHHHHHHHHHS-HHHHHHHHHCCHHHH...------BH.................................. CS
  DNA_ligase_A_N  55 r.eygigesllakalaealglskkkikdalakvgDlgevaeevlskrstl...akksplti.................................. 111
                     r +++++e+ l++++++++g +++k+++a+ k+ ++  +a++++  r ++   ++ +++++                                  
      EPX72056.1   7 RsRLNVEERPLRRLISRCMGFTNEKSDEASMKTLEIEFAAMSAFWLRLQMqldTHGKEVSLyqnnlrktqqdyeqeekeisrleqelllaqqeqe 101
                     4489******************999***9777788888888888777777777777777777777777777776666555555555555666644 PP

                     ..HHHHHHHHHHHH-STTHHHHHHHHHHH CS
  DNA_ligase_A_N 112 ..eevnelLdklaaagkgsedekkkilkk 138
                       +e +el + + a g +s+ e+ + ++k
      EPX72056.1 102 kqQEYDELAKPIMARGLRSRGEQLESIAK 130
                     43333333333333344444444444444 PP

>> ERM  Ezrin/radixin/moesin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9  18.7   1.5e-05    0.0088      14     116 ..      65     167 ..      54     175 .. 0.93

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 1.5e-05
         ERM  14 LkqlqeeaekaqeaLreseetaelLaekarraeeeaelLeqkaaeaeeeiqrlkesaekeeeekeklerklreaeleaarleeeserkeeeaerLkeel 112
                    +q++ +k+q++ +++e+++ +L++++  a++e+e+ ++  + a+  ++r  +s+ ++ e+ +kle  ++e e+e ++ e++ ++++e+ e+  + +
  EPX72056.1  65 VSLYQNNLRKTQQDYEQEEKEISRLEQELLLAQQEQEKQQEYDELAKPIMARGLRSRGEQLESIAKLESAIQELEEENKNYEQQWNQRKENFEKIVQSI 163
                 5669**************************************************************************************999988877 PP

         ERM 113 eear 116
                  e r
  EPX72056.1 164 DEFR 167
                 6665 PP

>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1       6.3   3.6e+03      15      26 ..       3      14 ..       3      34 .. 0.65
   2 ?    1.5   0.0      0.55   3.2e+02      25      57 ..      34      66 ..      31      73 .. 0.84
   3 ?   -2.0   2.7         7   4.1e+03      26      34 ..      84      92 ..      67     114 .. 0.55
   4 ?   15.0   2.4   3.5e-05      0.02      19      59 ..     119     159 ..     116     164 .. 0.92

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 6.3
                HHHHHHHHHHHH CS
      bZIP_1 15 eaArrsRqRKqa 26
                eaA rsR+  ++
  EPX72056.1  3 EAAIRSRLNVEE 14
                688888876554 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.55
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1 25 qaeieeLerrvkaLekeNksLkseleelkkeve 57
                +a+++ Le +++a+++    L+ +l++  kev+
  EPX72056.1 34 EASMKTLEIEFAAMSAFWLRLQMQLDTHGKEVS 66
                57899*********9999999999999888887 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 7
                HHHHHHHHH CS
      bZIP_1 26 aeieeLerr 34
                +ei++Le++
  EPX72056.1 84 KEISRLEQE 92
                333333333 PP

  == domain 4  score: 15.0 bits;  conditional E-value: 3.5e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  19 rsRqRKqaeieeLerrvkaLekeNksLkseleelkkevekL 59 
                 rsR    ++i++Le+  ++Le+eNk++ ++ ++ k++ ek 
  EPX72056.1 119 RSRGEQLESIAKLESAIQELEEENKNYEQQWNQRKENFEKI 159
                 7899999*****************************99986 PP

>> AIPR  AIPR protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   3.9   0.00014     0.082     119     229 ..      41     169 ..      34     179 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00014
        AIPR 119 dkdlasndefhkrlekllr............eeqtkvfYerargefdnek............afkpkskkitktdlakvlnalflqkPhqaskgkakle 193
                 + ++a+ + f+ rl+  l              ++t+  Ye++       +            a+++++k+  + +lak ++a  l+   +  ++ akle
  EPX72056.1  41 EIEFAAMSAFWLRLQMQLDthgkevslyqnnLRKTQQDYEQE-------EkeisrleqelllAQQEQEKQQEYDELAKPIMARGLRSRGEQLESIAKLE 132
                 667888888999999999966555444433323333334443.......255555557777755689999999********9999999999******** PP

        AIPR 194 kkyekeeekgskyekif.kekltykkliasvilfkkl 229
                 + +++ ee++++ye+++ ++k +++k+++s+  f++l
  EPX72056.1 133 SAIQELEEENKNYEQQWnQRKENFEKIVQSIDEFRTL 169
                 *****************445556*******9999876 PP

>> UPF0242  Uncharacterised protein family (UPF0242) N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7  18.5   0.00018       0.1      44     165 ..      43     170 ..      29     176 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 0.00018
     UPF0242  44 aaGsLlllllllkwekalkekl....ekskleekeaklteldeglktkeealeelqeeeeeLkeeldakeeel..erlkeenqqLqe..kleaiaedfe 134
                  ++ + +++l l+++ + + k     +++  ++++   +e++ +++  e++l  +q+e+e+ + e+d+  + +  + l+ + +qL++  kle + ++ e
  EPX72056.1  43 EFAAMSAFWLRLQMQLDTHGKEvslyQNNLRKTQQDYEQEEK-EISRLEQELLLAQQEQEKQQ-EYDELAKPImaRGLRSRGEQLESiaKLESAIQELE 139
                 566677777777776655444356767777777777766666.88999999988887777654.4554444331144566666665333999******* PP

     UPF0242 135 elkleleeqLaekqellqeyqetieeqrsvl 165
                 e  +++e+q ++++e +++  ++i e r  l
  EPX72056.1 140 EENKNYEQQWNQRKENFEKIVQSIDEFRTLL 170
                 **************************99887 PP

>> BRE1  BRE1 E3 ubiquitin ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   9.8    0.0026       1.5       5      74 ..      37     106 ..      34     127 .. 0.89
   2 ?    8.8   2.1    0.0029       1.6      48      89 ..     129     170 ..     123     175 .. 0.88

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0026
        BRE1   5 LvklekafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdalenelkkLnkllsKssel 74 
                 ++ le +f ++s+    ++++l  + ++++ ++++  k +q y + ++++  le+el   ++  +K++e 
  EPX72056.1  37 MKTLEIEFAAMSAFWLRLQMQLDTHGKEVSLYQNNLRKTQQDYEQEEKEISRLEQELLLAQQEQEKQQEY 106
                 7889999999999999***************************************************996 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.0029
        BRE1  48 faamrskdalenelkkLnkllsKsselieqLkelekefvrkl 89 
                   ++ +++ le e+k+  ++ ++ +e  e+  ++  ef+++l
  EPX72056.1 129 AKLESAIQELEEENKNYEQQWNQRKENFEKIVQSIDEFRTLL 170
                 667889999************************999999987 PP

>> Siah-Interact_N  Siah interacting protein, N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   3.5    0.0058       3.3      31      63 ..      84     112 ..      66     121 .. 0.70
   2 ?    8.7   2.2    0.0036       2.1      33      61 ..     128     154 ..     119     168 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0058
  Siah-Interact_N  31 aeirKleteilklkekqkakaqqksq.lleeekp 63 
                      +ei++le+e+      +++++q+k+q   e +kp
       EPX72056.1  84 KEISRLEQEL-----LLAQQEQEKQQeYDELAKP 112
                      79********.....4444444444421223444 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0036
  Siah-Interact_N  33 irKleteilklkekqkakaqqksqlleee 61 
                      i+Kle+ i++l+e++k+ +qq +q   +e
       EPX72056.1 128 IAKLESAIQELEEENKNYEQQWNQR--KE 154
                      89*******************9993..33 PP

>> ADIP  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   9.2    0.0049       2.9      58     123 ..      33      98 ..      27     111 .. 0.84
   2 ?    3.3   9.9      0.14        78      57     130 ..      94     168 ..      90     171 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0049
        ADIP  58 lnetirkleaeierlqskierlktqleqlerelalvqakerqlekklktleqklknekeelqrlkn 123
                  ++ +++le e + +++   rl+ ql    +e++l+q+++r+++++++++e+ + ++ +el   ++
  EPX72056.1  33 DEASMKTLEIEFAAMSAFWLRLQMQLDTHGKEVSLYQNNLRKTQQDYEQEEKEISRLEQELLLAQQ 98 
                 566788999999999999999*******************************99999999876554 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.14
        ADIP  57 slnetirkleaeierlqskier..lktqleqlerelalvqakerqlekklktleqklknekeelqrlknalqqikt 130
                 +l+++ ++++ e++ l + i    l  + eqle  +a ++++ ++le ++k+ eq+ ++ ke +++  + +++++t
  EPX72056.1  94 LLAQQEQEKQQEYDELAKPIMArgLRSRGEQLE-SIAKLESAIQELEEENKNYEQQWNQRKENFEKIVQSIDEFRT 168
                 678888889999999998886512445555554.68899999************************9999999987 PP

>> CENP-H  Centromere protein H (CENP-H)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8  14.3   0.00085      0.49      14      93 ..      71     160 ..      52     162 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00085
      CENP-H  14 ellklsqelrelqeeltevekenlrlkrknrelaaellelakekesek...........eklkeelekleaelkksrqrwrvvknvasaii 93 
                 +l k++q++++ ++e++++e+e l l ++++e+ +e  elak  +++             kl++++++le+e k+++q+w   k+ + +i+
  EPX72056.1  71 NLRKTQQDYEQEEKEISRLEQELL-LAQQEQEKQQEYDELAKPIMARGlrsrgeqlesiAKLESAIQELEEENKNYEQQWNQRKENFEKIV 160
                 455566666666666666666654.445556666666777776666668888888889999********************9999999887 PP

>> PHM7_cyt  Cytosolic domain of 10TM putative phosphate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   7.3    0.0011      0.64      39     122 ..      70     154 ..      54     164 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.0011
    PHM7_cyt  39 rdvkkldklveerekavrkleaalskykkngkklpkkrpthklg.flglkligkkvdaidyyrekleeldeeieeerekvkkkpl 122
                  +++k ++ +e+ ek + +le+ l   +++++k++ +    k+   +gl+  g++ ++i  +++ ++el+ee +  +++ ++++ 
  EPX72056.1  70 NNLRKTQQDYEQEEKEISRLEQELLLAQQEQEKQQEYDELAKPImARGLRSRGEQLESIAKLESAIQELEEENKNYEQQWNQRKE 154
                 4588888888999999999999888777777777666666666624577789**********************99999887765 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   7.6   0.00093      0.54     120     238 ..      65     175 ..      21     189 .. 0.46

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00093
     DUF4407 120 akelkeqlaaaltaelaeleaqiaalqaeidaaear..ldalraeaqkeldgtkgtgttgvaGkgpaakekkaqldaaqaelaelkakldatarlaalr 216
                 ++ ++++l++  +++++++e++i++l++e+  a+++   +++++e++k +      g   +  + ++     a+l+ a +el+e +++   +++ ++++
  EPX72056.1  65 VSLYQNNLRK-TQQDYEQEEKEISRLEQELLLAQQEqeKQQEYDELAKPIM---ARGLRSRGEQLES----IAKLESAIQELEEENKN--YEQQWNQRK 153
                 2222222221.3445555555555555554333322002222222222222...3332222222222....23333333333333333..444444444 PP

     DUF4407 217 aelaeleaerakeraasqaaaa 238
                 ++ +++ + +++ r+   ++++
  EPX72056.1 154 ENFEKIVQSIDEFRTLLHPSNN 175
                 4445555555544444444444 PP

>> TMPIT  TMPIT-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   4.1     0.021        12      10      75 ..      43     113 ..      31     124 .. 0.51
   2 ?    9.8   1.2   0.00074      0.43       2      44 ..     126     168 ..     125     182 .. 0.90

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.021
       TMPIT  10 efkeleetakeykqkleelsklqskcskeikkqkkrlkelksslkklkks.....vkeeeeeeveelkeel 75 
                 ef ++++   +++ +l++  k  s  +++++k ++++++ ++++++l+++     +++e+++e++el++ +
  EPX72056.1  43 EFAAMSAFWLRLQMQLDTHGKEVSLYQNNLRKTQQDYEQEEKEISRLEQElllaqQEQEKQQEYDELAKPI 113
                 44444444444444555555555555555555555555555555555544222212255556666666555 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00074
       TMPIT   2 eeweelekefkeleetakeykqkleelsklqskcskeikkqkk 44 
                 e++++le+ ++elee++k+y+q+ ++ ++  +k++++i++ + 
  EPX72056.1 126 ESIAKLESAIQELEEENKNYEQQWNQRKENFEKIVQSIDEFRT 168
                 67899*******************************9998765 PP

>> FUSC  Fusaric acid resistance protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   3.0     0.001      0.59     222     340 ..      38     148 ..      16     170 .. 0.64

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.001
        FUSC 222 rrllsrmlallallsslarllarlraeeaaavpelaallaelaaleaaaaaealeaalaalrarlralrraleadadtaalllarlaellaelaqllas 320
                 + l  +++a++a +  l+ +l ++ +e +      ++ l+++++     + e++e+++ +l+++l  +++++e++++ ++l+   +a  l++  + l+s
  EPX72056.1  38 KTLEIEFAAMSAFWLRLQMQLDTHGKEVSLY----QNNLRKTQQ-----DYEQEEKEISRLEQELLLAQQEQEKQQEYDELAKPIMARGLRSRGEQLES 127
                 5555566666666666666665555555544....444555555.....56667788888888887777777766666666666666666666666666 PP

        FUSC 321 lraleaaiaa.arraerlarh 340
                 +++le+ai++ +++ + ++ +
  EPX72056.1 128 IAKLESAIQElEEENKNYEQQ 148
                 666666666643333333333 PP

>> LMBR1  LMBR1-like membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   7.7    0.0011      0.64     211     324 ..      53     178 ..       4     192 .. 0.63

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0011
       LMBR1 211 klntekeeaereledllkevkklrksisesdplrkyleeilk........kvPeeiaeklks..............nenkteeslaklekqlikalqkr 287
                 +l+ +++   +e++ + ++++k+++ ++++++      ei +        +   + +ek ++              ++ +++es+akle+++++  +++
  EPX72056.1  53 RLQMQLDTHGKEVSLYQNNLRKTQQDYEQEEK------EISRleqelllaQ---QEQEKQQEydelakpimarglrSRGEQLESIAKLESAIQELEEEN 142
                 33333444444444444444444444444443......2222333332221...22222222445666777777766677999**************** PP

       LMBR1 288 ertekqwkrllekalelediiknksskekefksses..s 324
                 ++ e+qw++  e++   e+i+++ ++ ++ ++ s +  s
  EPX72056.1 143 KNYEQQWNQRKENF---EKIVQSIDEFRTLLHPSNNgdS 178
                 *********99999...9999999999888887766543 PP

>> Streptin-Immun  Lantibiotic streptin immunity protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   1.1     0.016       9.5      41      80 ..      42      84 ..      26      91 .. 0.70
   2 ?    1.3   1.4      0.81   4.7e+02      53      80 ..      85     111 ..      82     115 .. 0.77
   3 ?   11.1   1.1   0.00072      0.42      53      90 ..     134     171 ..     124     174 .. 0.91

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.016
  Streptin-Immun 41 ydfskln...ltesvtleqiekeieklqnelskkideyeelvr 80
                     +f+ +    l  +++l+   ke++  qn+l k+ ++ye+  +
      EPX72056.1 42 IEFAAMSafwLRLQMQLDTHGKEVSLYQNNLRKTQQDYEQEEK 84
                    4555543222778899999*******************98654 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.81
  Streptin-Immun  53 tleqiekeieklqnelskkideyeelvr 80 
                      + ++e+e+   q+e +k+ +ey+el++
      EPX72056.1  85 EISRLEQELLLAQQEQEKQ-QEYDELAK 111
                     5789999999999987665.77888765 PP

  == domain 3  score: 11.1 bits;  conditional E-value: 0.00072
  Streptin-Immun  53 tleqiekeieklqnelskkideyeelvrkldkfvkvln 90 
                      ++++e+e ++  ++ +++ +++e++v+ +d+f  +l 
      EPX72056.1 134 AIQELEEENKNYEQQWNQRKENFEKIVQSIDEFRTLLH 171
                     5899*****************************98875 PP

>> DUF16  Protein of unknown function DUF16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   7.5      0.77   4.5e+02      39      76 ..      68     105 ..      30     129 .. 0.59
   2 ?   10.7   7.6   0.00097      0.56      32      96 ..     102     167 ..      95     171 .. 0.80

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.77
                 HHHHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       DUF16  39 ieakvdklgeqinkleqkvekqgekikelkveqkaqge 76 
                  +++++k ++  ++ e++++++++++   ++eq++q+e
  EPX72056.1  68 YQNNLRKTQQDYEQEEKEISRLEQELLLAQQEQEKQQE 105
                 34444444455555555555555555444555555544 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00097
                 BHHHHHHHHHHHH...HHHH.HHHHHHHHHHHHHHHHHHHHHHHHH.......HHHHHHHHHHHHH CS
       DUF16  32 nkqrLkkieakvdklgeqin.kleqkvekqgekikelkveqkaqgeelnkvdetleliletLqkin 96 
                  +q+  ++ + ++++g +   ++ + + k++  i+el++e k  +++ n+ +e +e i+++++++ 
  EPX72056.1 102 KQQEYDELAKPIMARGLRSRgEQLESIAKLESAIQELEEENKNYEQQWNQRKENFEKIVQSIDEFR 167
                 566666666666666654432677899**********************************99875 PP

>> Asp-B-Hydro_N  Aspartyl beta-hydroxylase N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5  12.2    0.0034         2     106     210 ..      69     173 ..      55     191 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0034
  Asp-B-Hydro_N 106 kEqlkkvkeeivvkeeeeegieeepqleeekkllkedsderqeeleag...kvkeevEeslkveetvseeakkdmkekaseeenekskepveeaek 198
                    + +l+k +++ +++e+e  + e+e+ l+++++ ++++ de +++  a     + e+ E  +k e +++e +++   +k +e++ ++ ke  e+ ++
     EPX72056.1  69 QNNLRKTQQDYEQEEKEISRLEQELLLAQQEQEKQQEYDELAKPIMARglrSRGEQLESIAKLESAIQELEEE---NKNYEQQWNQRKENFEKIVQ 161
                    5679999***********************************9976642215678888889999888776554...78888888888888888777 PP

  Asp-B-Hydro_N 199 ekaeakeveeed 210
                      +e + + + +
     EPX72056.1 162 SIDEFRTLLHPS 173
                    777666655544 PP

>> FapA  Flagellar Assembly Protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0  11.2    0.0033       1.9     336     426 ..      69     158 ..      52     174 .. 0.60

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0033
        FapA 336 keklkeleeeleeleeeleklkkkikklpklka.ekqlesekkeqlkklletkeklkeeleeleeelkelkeeleskkeeakikvnkeiypg 426
                 +++l++ ++++e+ e+e+ +l++++ + +++++ ++++++  k  +++ l+++ +  e++++le  ++el+ee +++  e++++ +ke + +
  EPX72056.1  69 QNNLRKTQQDYEQEEKEISRLEQELLLAQQEQEkQQEYDELAKPIMARGLRSRGEQLESIAKLESAIQELEEENKNY--EQQWNQRKENFEK 158
                 44556666666666666666666633333322225556666666666666666666677777777777777776666..3344444444444 PP

>> DUF724  Protein of unknown function (DUF724)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   6.5     0.063        36     112     156 ..      59     103 ..      25     110 .. 0.61
   2 ?    8.2  14.4    0.0034         2      80     186 ..      58     161 ..      50     163 .. 0.80

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.063
      DUF724 112 kklekkieeeesekrkleeeidelekkilelerqlallkekkeaa 156
                     k+++  +++ rk +++ ++ ek+i++le++l l+++++e++
  EPX72056.1  59 DTHGKEVSLYQNNLRKTQQDYEQEEKEISRLEQELLLAQQEQEKQ 103
                 333444455556666666666666666666666666665444333 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.0034
      DUF724  80 LekhGFdVkalqsrlnkLlslkdeqtklleerkklekkieeeesekrkleeeidelekkilelerqlallk.ekkeaadkeiarlkseaekleeeledv 177
                 L +hG +V   q   n+L + ++++++ ++e+++le+++  +++e++k ++e del k i+    ++   + e   + ++ i +l+ e++++e++ ++ 
  EPX72056.1  58 LDTHGKEVSLYQ---NNLRKTQQDYEQEEKEISRLEQELLLAQQEQEK-QQEYDELAKPIMARGLRSRGEQlESIAKLESAIQELEEENKNYEQQWNQR 152
                 556665565555...566778999999999999**9999999888776.8889999999986554444333478889999******************* PP

      DUF724 178 eqeFeavas 186
                 +++Fe+++ 
  EPX72056.1 153 KENFEKIVQ 161
                 *****9985 PP

>> V_ATPase_I  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   8.4    0.0033       1.9      16     116 ..      70     167 ..      54     194 .. 0.54

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0033
  V_ATPase_I  16 edvnafqrkfvkevrrcdemerklrfleeeieklekavikeeeaeesleapeekeldeleeelekleeelkelnenleklkkelnelve.lkavlekak 113
                 +++++ q+++ +e + +  +e++l + ++e ek+++    ++       a+  ++  e  e++ kle+ ++el+e++++ +++ n+ +e  ++++++++
  EPX72056.1  70 NNLRKTQQDYEQEEKEISRLEQELLLAQQEQEKQQEYDELAKP----IMARGLRSRGEQLESIAKLESAIQELEEENKNYEQQWNQRKEnFEKIVQSID 164
                 4566677777777777777777777777776664444444443....3333333333333445555555555555555555555544431344555555 PP

  V_ATPase_I 114 efl 116
                 ef 
  EPX72056.1 165 EFR 167
                 443 PP

>> TMF_DNA_bd  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   7.5      0.27   1.6e+02      47      70 ..      70      93 ..      54     111 .. 0.71
   2 ?   11.9   3.4    0.0003      0.17      31      71 ..     124     164 ..     118     167 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.27
  TMF_DNA_bd 47 keikelkkkleklekeleeleerl 70
                ++++++++  e++eke+++le++l
  EPX72056.1 70 NNLRKTQQDYEQEEKEISRLEQEL 93
                566666677777777777777765 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 0.0003
  TMF_DNA_bd  31 lnntikkLrkknkelekeikelkkkleklekeleeleerlk 71 
                 + ++i kL + ++ele+e k+++++ ++  +++e++ ++ +
  EPX72056.1 124 QLESIAKLESAIQELEEENKNYEQQWNQRKENFEKIVQSID 164
                 7799*******************999999999998877665 PP

>> Swi5  Swi5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   3.7      0.27   1.6e+02       3      38 ..      70     104 ..      54     113 .. 0.73
   2 ?   10.8   1.2   0.00067      0.39       3      37 ..     126     161 ..     125     174 .. 0.77

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.27
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHH CS
        Swi5   3 aeikeleeqleelekelaelkeelkekkdpeetvkr 38 
                 +++++ ++ +e+ eke++ l++el   +  e+++++
  EPX72056.1  70 NNLRKTQQDYEQEEKEISRLEQELLLAQ-QEQEKQQ 104
                 5667777888888888888888877654.4444444 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00067
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH..HHHHHH CS
        Swi5   3 aeikeleeqleelekelaelkeelkekk.dpeetvk 37 
                 ++i++le+ ++ele+e ++++++ +++k + e++v+
  EPX72056.1 126 ESIAKLESAIQELEEENKNYEQQWNQRKeNFEKIVQ 161
                 5899*******************9988743344433 PP

>> CENP-Q  CENP-Q, a CENPA-CAD centromere complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4  11.6    0.0019       1.1      25      86 ..      42     104 ..      16     125 .. 0.81
   2 ?    4.2   2.9     0.079        46      60      96 ..     126     162 ..     117     193 .. 0.70

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0019
      CENP-Q  25 ldfeklldekaaleaqLspelhslelLeaeiekeeralerdyeaLreLeknakaeare.rkek 86 
                  +f +++    +l+ qL++  + ++l +++++k ++ +e++++++ +Le++   ++ e +k++
  EPX72056.1  42 IEFAAMSAFWLRLQMQLDTHGKEVSLYQNNLRKTQQDYEQEEKEISRLEQELLLAQQEqEKQQ 104
                 555566666678999************************************988888834443 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.079
      CENP-Q  60 ralerdyeaLreLeknakaearerkeklkkehvllqe 96 
                 +  ++ + a++eLe++ k+ + ++++++++ ++++q+
  EPX72056.1 126 ESIAKLESAIQELEEENKNYEQQWNQRKENFEKIVQS 162
                 5566777888888888888888888888887777773 PP

>> zf-C4H2  Zinc finger-containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8  15.1     0.026        15       2     116 ..      72     183 ..      56     193 .. 0.68

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.026
     zf-C4H2   2 ikeirektleleklknklakevealekeekcleeykkelelLe.qEkmaHveeLrlIhaDinalEsvikeaeeekekslekakklyeeykklkeevnel 99 
                 ++++++ +++ ek  ++l +e+ + ++e++  +ey +  + ++ +  ++  e+L      i +lEs i+e eee+++ +++ ++  e+++k+ ++++e 
  EPX72056.1  72 LRKTQQDYEQEEKEISRLEQELLLAQQEQEKQQEYDELAKPIMaRGLRSRGEQLE----SIAKLESAIQELEEENKNYEQQWNQRKENFEKIVQSIDEF 166
                 3444555555555555555555555555555555555544433133344455554....46789*********************************** PP

     zf-C4H2 100 rselglekledleeeee 116
                 r+ l  ++  d ++ee 
  EPX72056.1 167 RTLLHPSNNGDSDSEEG 183
                 99887777777666665 PP

>> OmpH  Outer membrane protein (OmpH-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9  14.2     0.013       7.3      29      95 ..      52     114 ..      30     119 .. 0.77
   2 ?    6.9   4.7     0.013       7.3      33      73 ..     129     167 ..     118     179 .. 0.64

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.013
                 HHHHHHHHHHHHHHHHHHHHHHHHTTTS.-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        OmpH  29 kklqaeleakekelqklqeelqkkakklekeekeqelqkkeqelqqkqqqkaqelqkkqqellkpil 95 
                  +lq +l++ +ke+   q++l k +++   e++e+e+ ++eqel   +qq+ qe q++  el kpi+
  EPX72056.1  52 LRLQMQLDTHGKEVSLYQNNLRKTQQD--YEQEEKEISRLEQELLL-AQQE-QEKQQEYDELAKPIM 114
                 467889999999999999999766666..8999999******9999.6666.788888888888887 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.013
                 HHHHHHHHHHHHHHHHHHHHTTTS..-HHHHHHHHHHHHHHH CS
        OmpH  33 aeleakekelqklqeelqkkakkl.ekeekeqelqkkeqelq 73 
                 a+le+  +el+++ ++++   +++ +++e ++++ +  +e++
  EPX72056.1 129 AKLESAIQELEEENKNYE---QQWnQRKENFEKIVQSIDEFR 167
                 455555566666666665...555446666666666666655 PP

>> DUF641  Plant protein of unknown function (DUF641)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   6.9    0.0086         5      75     125 ..      53     103 ..      15     107 .. 0.78
   2 ?    4.0   3.3       0.1        58      71     116 ..     126     171 ..     102     182 .. 0.61

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0086
      DUF641  75 eleaeiqeqrsllktyeitvkkleaelkakdseieeLkekLeeaeksnkkl 125
                 +l+ +++++ + +  y+  ++k +++ ++ ++ei++L+++L  a+++++k 
  EPX72056.1  53 RLQMQLDTHGKEVSLYQNNLRKTQQDYEQEEKEISRLEQELLLAQQEQEKQ 103
                 56667777888999***************************9999988875 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.1
      DUF641  71 aeeseleaeiqeqrsllktyeitvkkleaelkakdseieeLkekLe 116
                 ++ ++le+ iqe+ +  k ye   ++ ++++++  + i+e +  L+
  EPX72056.1 126 ESIAKLESAIQELEEENKNYEQQWNQRKENFEKIVQSIDEFRTLLH 171
                 4455666666666666666666666666666666666666666555 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   3.7      0.11        65      24      51 ..      63      90 ..      46      97 .. 0.73
   2 ?    0.4   9.6      0.97   5.6e+02      13      44 ..      73     104 ..      65     115 .. 0.74
   3 ?   11.7   3.6   0.00028      0.16      12      51 ..     114     153 ..     110     161 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.11
                HHHHHHHHHHHHHHHHHHHHHHHHCC-X CS
       DivIC 24 qeiaalqaelaklkaeneeLeaevkdLk 51
                +e+   q++l k +++ e+ e+e+++L+
  EPX72056.1 63 KEVSLYQNNLRKTQQDYEQEEKEISRLE 90
                5667777888888888888888888884 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.97
                 XXXXXHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       DivIC  13 kkgllaykqlkqeiaalqaelaklkaeneeLe 44 
                  k++++y q ++ei +l++el   ++e+e+ +
  EPX72056.1  73 RKTQQDYEQEEKEISRLEQELLLAQQEQEKQQ 104
                 56778888888888888888877777666543 PP

  == domain 3  score: 11.7 bits;  conditional E-value: 0.00028
                 XXXXXXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-X CS
       DivIC  12 gkkgllaykqlkqeiaalqaelaklkaeneeLeaevkdLk 51 
                 +++gl+++ ++ + ia+l+  +++l +en++ e++ ++ k
  EPX72056.1 114 MARGLRSRGEQLESIAKLESAIQELEEENKNYEQQWNQRK 153
                 67899999**************************987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2954  (0.164761); expected 358.6 (0.02)
Passed bias filter:                      802  (0.044732); expected 358.6 (0.02)
Passed Vit filter:                       122  (0.00680462); expected 17.9 (0.001)
Passed Fwd filter:                        47  (0.00262145); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              31  [number of targets reported over threshold]
# CPU time: 0.73u 0.28s 00:00:01.01 Elapsed: 00:00:00.46
# Mc/sec: 1292.01
//
Query:       EPX72057.1  [L=174]
Description: CGI121 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-45  155.4   0.9    1.5e-45  155.2   0.9    1.0  1  CGI-121   Kinase binding protein CGI-121


Domain annotation for each model (and alignments):
>> CGI-121  Kinase binding protein CGI-121
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  155.2   0.9   8.4e-50   1.5e-45       1     162 []      16     171 ..      16     171 .. 0.97

  Alignments for each domain:
  == domain 1  score: 155.2 bits;  conditional E-value: 8.4e-50
                 EES-S-HHHHHHTHC..CHCTT-EEE-GGG---HHHHHHHHHHHHHHHHHS---SSSHHHHHHHHHSSSS-HHHHHHHHB--TT-S-EEEEEEESSS-- CS
     CGI-121   1 FknVknaaelrkqllskraeldfafldaslilskehllsAvlrallaaargklktktlhsEilfsLspnnnIgealkrfgisdkttsllvvkvsssead 99 
                 F+nV+na+el+++l+ +++++d+af+das i+s ++++sA++ral a+++g++k+ktlh E+++sL p+++I+ al++fg+++k+++++v +++ + ++
  EPX72057.1  16 FENVENAEELHQELIGQNPAYDYAFIDASSIVSVKQIYSAAMRALQAQSDGQMKSKTLHMEVILSLCPKTEISTALRQFGMTKKSKNIVVLEINGA-PS 113
                 9********************************************************************************************998.9* PP

                 HHHHHHHHHHHS-SEEE--SH.HHHHH--HHHHHHHTT--..TT---SSHHHHHHHHHHHHHTX CS
     CGI-121 100 eeevlkslkevvegelvplee.eleeltdwkkikkiYklneleeekeeevkeledlvvsavalk 162
                 eee+l++++++v+g+++p+ + +l++l+d+k +kk+Ykl+      ++++++ +++++sa+al+
  EPX72057.1 114 EEEELARVAKIVQGKQLPFCDeTLKKLADMKLVKKYYKLD------AAAMQNPTAAILSAIALR 171
                 ******************9999******************......356888**********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       595  (0.0331865); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.45
# Mc/sec: 1173.57
//
Query:       EPX72058.1  [L=133]
Description: Shk1 kinase binding protein 5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.7e-10   39.5   0.0    6.2e-10   38.8   0.0    1.4  1  SH3_9     Variant SH3 domain
    1.4e-08   34.2   0.6      3e-08   33.1   0.0    1.9  2  SH3_1     SH3 domain
    1.1e-05   25.0   0.0    2.1e-05   24.1   0.0    1.5  1  SH3_2     Variant SH3 domain
  ------ inclusion threshold ------
      0.062   13.1   0.0      0.088   12.6   0.0    1.2  1  Imm48     Immunity protein 48


Domain annotation for each model (and alignments):
>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.8   0.0   1.4e-13   6.2e-10       1      48 [.      80     129 ..      80     130 .. 0.96

  Alignments for each domain:
  == domain 1  score: 38.8 bits;  conditional E-value: 1.4e-13
       SH3_9   1 AlypyepreddeLsLqrGDvitvieesedgWlegsl..tGrtGlvPanyv 48 
                 Aly++ep ++ eL +++G++i +i+e++ gWl +    +G +GlvP++yv
  EPX72058.1  80 ALYDFEPLHENELGVSEGQTICIISEASHGWLVAYDefSGGSGLVPESYV 129
                 9*********************************9557***********9 PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.5      0.68     3e+03       4      13 ..      59      68 ..      58      68 .. 0.86
   2 !   33.1   0.0   6.7e-12     3e-08       1      47 [.      79     125 ..      79     126 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.68
                SSBEXSSTTB CS
       SH3_1  4 YDYeaeesdE 13
                 DY ae+sd+
  EPX72058.1 59 NDYGAEDSDD 68
                59*9**9997 PP

  == domain 2  score: 33.1 bits;  conditional E-value: 6.7e-12
                 EESSSBEXSSTTBXEBSTTEEEEEEEECSSSEEEEEETTSTEEEEEE CS
       SH3_1   1 iAlYDYeaeesdELsfkkGDviivleksedgWwkgrlkgtgkeGliP 47 
                 +AlYD+e+ +++EL   +G +i ++++  +gW+ + +  +g  Gl+P
  EPX72058.1  79 VALYDFEPLHENELGVSEGQTICIISEASHGWLVAYDEFSGGSGLVP 125
                 7*************************9999********999*****9 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.0   4.6e-09   2.1e-05       3      55 ..      79     130 ..      72     132 .. 0.88

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 4.6e-09
                 EESS-B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEE..CCCEEEEEGCGEE CS
       SH3_2   3 raiedyvgedkseLsfkkGdvikvlslgskdsdgwwegev..gGrvGlfPsslve 55 
                 +a+ d+++  ++eL   +G++i+++   s+ s+gw  ++    G  Gl+P s+v 
  EPX72058.1  79 VALYDFEPLHENELGVSEGQTICII---SEASHGWLVAYDefSGGSGLVPESYVN 130
                 6788999999999************...999999966655589**********97 PP

>> Imm48  Immunity protein 48
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0     2e-05     0.088      11      61 ..      32      82 ..      27      95 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 2e-05
       Imm48 11 kilelikidlkdelerqvlaaylFGvlnalaleesispidiqavmieilie 61
                +i+e+++ d++d+ ++ v+++   G  n ++ e s +p  iq+v+ +++  
  EPX72058.1 32 RIVEKVEEDYEDDGDASVFSTLNNGEANDYGAEDSDDPNTIQVVCDAVALY 82
                68999**************************************99777655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       247  (0.0137766); expected 358.6 (0.02)
Passed bias filter:                      225  (0.0125495); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.29s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 849.18
//
Query:       EPX72059.1  [L=204]
Description: xrcc4 like factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-16   60.9   4.3      2e-16   60.7   4.3    1.1  1  XLF       XLF-Cernunnos, XRcc4-like factor, NHEJ component


Domain annotation for each model (and alignments):
>> XLF  XLF-Cernunnos, XRcc4-like factor, NHEJ component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.7   4.3   1.1e-20     2e-16       2     138 ..       4     134 ..       3     169 .. 0.80

  Alignments for each domain:
  == domain 1  score: 60.7 bits;  conditional E-value: 1.1e-20
         XLF   2 Wrvleidgsepkllvklefs.essyel...lltDlanvWseeldrdeilkrakeentsidpsedeeqlavlleklrkal.dgskkssaefslnlsskae 95 
                 W +l+ ++    ++++++f+ e+s ++    +tDl+++W ++ ++d+++++a++++++idp+   e++ +l+e l++ l + s +     +++l++  +
  EPX72059.1   4 WTQLRGHK---YHFLQAHFDpEDSLHVmkiSITDLTRLWGCTYSKDQTIEQAEKQRCPIDPF---ETFDTLIELLSETLlNVSSE----SHVSLKETKS 92 
                 88888877...79999999985565543338*******************************...89999999999999322333....3667777556 PP

         XLF  96 edsLtlkltieLpgplspleWefslvkepsssltkeLvlpllq 138
                 ++ + l ++i+ ++ + +l W+++l ++p ++++k +++pl  
  EPX72059.1  93 DECISLFCKIKVTKDI-QLDWKWTLRLQPAEAMSKLIWFPLTF 134
                 779************9.***********************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       580  (0.0323498); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 1397.84
//
Query:       EPX72060.1  [L=468]
Description: RNA endoribonuclease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.4e-30  103.6   0.0    1.6e-29  102.8   0.0    1.4  1  PIN_4     PIN domain


Domain annotation for each model (and alignments):
>> PIN_4  PIN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.8   0.0   9.1e-34   1.6e-29       1     130 [.      69     199 ..      69     200 .. 0.94

  Alignments for each domain:
  == domain 1  score: 102.8 bits;  conditional E-value: 9.1e-34
       PIN_4   1 fVlDTnvlLhdpealksf.......keehdvviPitVleELdklKkgsserelarlarqanrlldellekesgrlkvqtsaeelpeeeseseknDnrIl 92 
                 fV+DTn+lL+++ +++++         +  + +P++Vl+ELd+lK++++   +++larqa ++l ++++ + ++l++q+++e+++  + e  + Dn+Il
  EPX72060.1  69 FVVDTNFLLSHLVLCQNLlevlskqFPQVVILLPWVVLQELDGLKSDTK-AACGYLARQAHEFLLQCFRASLPNLRGQKLHERCSV-N-E--SGDNAIL 162
                 8*********************95544555667***************9.9**********************************8.3.5..9****** PP

       PIN_4  93 avalelkeekpdrkvvLvskDinlrikAkalgieaedy 130
                 +++l++++ek   +v L+s+D+nl+ikA ++ +++++y
  EPX72060.1 163 DCCLYFQNEK-LIPVNLLSDDKNLCIKAAVHHVSSQSY 199
                 *********9.8************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (468 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       468  (0.026103); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.29s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 3170.17
//
Query:       EPX72061.1  [L=127]
Description: hypothetical protein SOCG_03993 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-12   47.5   0.0      2e-12   47.1   0.0    1.2  1  PAC4      Proteasome assembly chaperone 4


Domain annotation for each model (and alignments):
>> PAC4  Proteasome assembly chaperone 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.1   0.0   1.1e-16     2e-12       2      79 ..      19      92 ..      18      93 .. 0.92

  Alignments for each domain:
  == domain 1  score: 47.1 bits;  conditional E-value: 1.1e-16
        PAC4  2 lhlqltrl..adsillwvgtasskeasplgslvvAmpsrtnkktptisTtLlgdg.sdeaserlAqrLArRlgkqvfvScn 79
                +++ql+ +  + si++w++++ s +    g+l++ +p  ++    +++T L+g g  d+ s+r++++L++R+++q f+S+ 
  EPX72061.1 19 VWIQLVEMlpSSSIYVWASNSGSCP---SGNLTLGVPMGKD----IATTDLVGVGsIDDLSRRMSRILSKRYQIQAFCSIT 92
                78999999999*********99998...8*********877....78********8899********************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       358  (0.0199677); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.45
# Mc/sec: 848.54
//
Query:       EPX72062.1  [L=233]
Description: COPII-coated vesicle component Emp24 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.6e-45  154.6   0.1    4.1e-45  154.0   0.1    1.3  1  EMP24_GP25L  emp24/gp25L/p24 family/GOLD


Domain annotation for each model (and alignments):
>> EMP24_GP25L  emp24/gp25L/p24 family/GOLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  154.0   0.1   2.3e-49   4.1e-45       3     182 .]      57     228 ..      55     228 .. 0.92

  Alignments for each domain:
  == domain 1  score: 154.0 bits;  conditional E-value: 2.3e-49
  EMP24_GP25L   3 tfklpageekCfyeelkkgtlltgsyqvtdggaaldvdlsvkdpdgngerlvkkkdresegdfsftakesgeykvCfdnsfstksskkvsfdievgse 100
                   ++lp+++++Cfye+l+ +++++++yq++ gg ++ v+lsv++p +   +l++++  ++++++sft+k +g+y++Cf+n   +   k+v f+++    
   EPX72062.1  57 GIHLPPHQTECFYENLRTNDKMSVTYQTNLGG-DQLVSLSVYNPLN---QLMHQEVPSAMSQYSFTVKNPGKYTYCFKNDALDNEAKEVLFNVHGVIY 150
                  589*****************************.8********6666...88888899999********************999999********7554 PP

  EMP24_GP25L 101 asdykdsakkekletleselkkleekldsikreqkylrereerlrdtnestnsrvvwwsilqllvlvlvavlqvyyLkrfFk 182
                  +sd   ++  e  ++l  ++++l++ ++++k+eq+y  +re+ +r+t+estn+rv wwsilq+++l+ v+v+q++yLkr+F+
   EPX72062.1 151 VSD---EDL-EADNPLIGKVRNLHDTISHVKDEQEYFVARERVHRNTAESTNDRVKWWSILQTIILLSVCVFQIIYLKRLFE 228
                  333...444.44599******************************************************************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       707  (0.0394333); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1650.86
//
Query:       EPX72063.1  [L=93]
Description: leydig cell tumor protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.2e-17   62.6  11.0    5.2e-17   62.3  11.0    1.1  1  DUF2462   Protein of unknown function (DUF2462)
  ------ inclusion threshold ------
       0.12   12.1   1.9       0.14   11.9   1.9    1.0  1  DUF2855   Protein of unknown function (DUF2855)


Domain annotation for each model (and alignments):
>> DUF2462  Protein of unknown function (DUF2462)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.3  11.0   5.8e-21   5.2e-17       1      74 [.       1      79 [.       1      82 [. 0.94

  Alignments for each domain:
  == domain 1  score: 62.3 bits;  conditional E-value: 5.8e-21
     DUF2462  1 MaQGklKkkkkkk...sakakkkaknpkkgarviaPKkaklvkqqklkkklsaglnkktEkelasrAgss..kLellkg 74
                M+QG+lKkk +k+   ++k +k++kn kkgar++aP+ka++vk++  +  +++++n+++E++ a  A+++  kL+++k+
  EPX72063.1  1 MPQGELKKKGSKNtknAHKISKQKKNVKKGARYFAPRKAAAVKDHLANEGITKTINSRNERMAAGLASQQmgKLTITKS 79
                ****999888555667*****************************************************9******997 PP

>> DUF2855  Protein of unknown function (DUF2855)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   1.9   1.5e-05      0.14     252     326 ..      13      87 ..       6      91 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 1.5e-05
     DUF2855 252 sseelqeakaaaaalakpvqffapevidkrieelgaeeyferlaaawkrfleeaavkekklvrvegvkGaeavek 326
                 +++++++ ++++++++k   +fap   ++  + l +e++++++++  +r+++  a +++  +++++  G+eav++
  EPX72063.1  13 NTKNAHKISKQKKNVKKGARYFAPRKAAAVKDHLANEGITKTINSRNERMAAGLASQQMGKLTITKSMGDEAVKE 87 
                 33444555666667778899****************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1228  (0.0684924); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 659.31
//
Query:       EPX72064.1  [L=442]
Description: hypothetical protein SOCG_03996 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (442 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       865  (0.0482459); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.45
# Mc/sec: 2947.01
//
Query:       EPX72065.1  [L=251]
Description: triosephosphate isomerase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.9e-87  290.7   0.8    8.9e-87  290.5   0.8    1.0  1  TIM       Triosephosphate isomerase


Domain annotation for each model (and alignments):
>> TIM  Triosephosphate isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  290.5   0.8     5e-91   8.9e-87       2     243 .]       8     246 ..       7     246 .. 0.97

  Alignments for each domain:
  == domain 1  score: 290.5 bits;  conditional E-value: 5e-91
                 EEEEE-TBTS-HHHHHHHHHHHHHHCHG.CTSEEEEE--GGGHHHHHHHHTTSSECEEES--BSSSSBS-TT--BHHHHHHTT-SEEEES-HHHHHHST CS
         TIM   2 liagNwKmnktleeakellkklkaklke.ekvevviappflylekvkklleesklklgaqnvsaeksGafTGevsaemlkdlgvkyviiGHsErrqlfk 99 
                 +++gN+Kmn+++e++k+++ +l++++ + +kve+vi+p+ lyl +++++++ + + +gaqnv+ +k+Ga+TGe sa+ l d+g++y++ GHsErr++f+
  EPX72065.1   8 FVGGNFKMNGSQESMKQIVGALNENKLNvDKVETVIFPQNLYLIPTREHVR-KDIGVGAQNVHDKKNGAYTGENSAQSLIDAGINYTLTGHSERRTIFH 105
                 799******************66666566*********************6.99********************************************* PP

                 --HHHHHHHHHHHHHTT-EEEEEE---HHHHHTT.HHHHHHHHHHHHTTTS-CCCGGCEEEEE--GGGSSSS----HHHHHHHHHHHHHHHHHHSTHHH CS
         TIM 100 EtdelvakKvkaalksglkpilCvGEtleereagkteevvkeqlkeilkkldeealknvviAYePvWAiGtgktatpeqaqevhaairkelaekvskev 198
                 E+delva+K+++a+++gl+++ C+GEtl+erea++t +vv++ql+++++k+++  +++vv+AYePvWAiGtgktatp qaqevha+irk+ ae++++++
  EPX72065.1 106 ESDELVADKTQFAIEQGLTVVACIGETLAEREANDTIKVVVRQLNALADKVKS--WSKVVVAYEPVWAIGTGKTATPAQAQEVHAEIRKWAAERLGAQA 202
                 ************************************************99975..79****************************************** PP

                 HTTSEEEEESS--TTTHHHHHTSTT--EEEESGGGCSHHHHHHHH CS
         TIM 199 aekirilYGGsvnkenakellkqkdidGlLvGgaslkaesFlkii 243
                 ae +ri+YGGsvn  n+ke+l+ kd+dG+LvGgaslk+e F +i+
  EPX72065.1 203 AEGLRIIYGGSVNGGNCKEFLQFKDVDGFLVGGASLKPE-FHNIV 246
                 *************************************98.88875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (251 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       654  (0.0364772); expected 358.6 (0.02)
Passed bias filter:                      499  (0.027832); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.45
# Mc/sec: 1674.29
//
Query:       EPX72066.1  [L=1023]
Description: DNA polymerase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   1.9e-100  335.6   0.0   3.5e-100  334.8   0.0    1.4  1  DNApol_Exo      DNA mitochondrial polymerase exonuclease doma
      3e-49  168.1   0.0    4.7e-49  167.4   0.0    1.2  1  DNA_pol_A       DNA polymerase family A
    0.00033   20.4   0.2     0.0056   16.4   0.2    2.4  1  DNA_pol_A_exo1  3'-5' exonuclease


Domain annotation for each model (and alignments):
>> DNApol_Exo  DNA mitochondrial polymerase exonuclease domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  334.8   0.0  5.8e-104  3.5e-100       2     282 .]      98     374 ..      97     374 .. 0.93

  Alignments for each domain:
  == domain 1  score: 334.8 bits;  conditional E-value: 5.8e-104
  DNApol_Exo   2 evefklPkLegenieeHfrklgekqaepylslaeelaeaelpeipekwalksGWtrYekdksaesvdyPeeealvfDvevlvkesklpvlAvavsekaW 100
                 +++f+lP+L+g++++eHf+++g++ aep+l+ a+++a+++lp+ip+kw  +sGWtrY +d+++e+v+yP+e +lvfDvevl+k s+++vlAva+s++aW
  EPX72066.1  98 SYNFRLPALQGKSLTEHFENIGRECAEPHLTNANSFAQISLPPIPKKWLHHSGWTRYGSDGTVEQVPYPKEAMLVFDVEVLYKVSDFAVLAVAASPDAW 196
                 689************************************************************************************************ PP

  DNApol_Exo 101 YsWvSprlleeseeeeklelkeLiplesskkervvvGhnvsyDRarikeeYslessktrflDTmsLhvavsGltsqqralwlkarkekkkkekaae... 196
                 Y+W+Sp+ll+++e     + ++Lipl    + +++vGh+vs+DR+ri++eYsl++s+++f+DTmsLhva++G++s+q+++w ka+k+ +++  +++   
  EPX72066.1 197 YCWLSPWLLGKTE-----QDRNLIPLR--PEGHLIVGHHVSFDRQRILQEYSLKRSNNAFIDTMSLHVATNGMCSRQKPTWFKAKKAFRQTIGKESngs 288
                 *************.....89******9..5689***************************************************998665544443122 PP

  DNApol_Exo 197 eeeeeeekkeeeseeeekewkevsslnsLadvaklycgieldKekrdlfvketleeirenfqelleYcakDveathevfkkllpkF 282
                 ++++++ + + e+  e++ w +++s+nsL+dvak++c+i+++K++rdlf + +   i +n++e+++Yca+Dv+athev+k++lp+F
  EPX72066.1 289 DDDSSQAEFDYENFIEQEPWLRHVSVNSLKDVAKFHCNIDMSKATRDLFSELDKGVILQNLDEAISYCASDVHATHEVYKRILPQF 374
                 4455555666677788999*****************************************************************99 PP

>> DNA_pol_A  DNA polymerase family A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  167.4   0.0   7.9e-53   4.7e-49      70     370 ..     570     940 ..     512     943 .. 0.86

  Alignments for each domain:
  == domain 1  score: 167.4 bits;  conditional E-value: 7.9e-53
                 .CHHHHHHHHHHHHHHHHHT..TTTGGGCC.....BTT.TSEE--EEE...........SSSSSSSS-EEESS-GGGS-TTS..............CCH CS
   DNA_pol_A  70 hplaklileyrelsklksty..vdallkli.....nkk.tgrihtsfn...........qtvtatGrlsssepnlqnipirt..............eeg 135
                  pl k++ +y+e + l s++  ++++l++      +++ ++ri+++++           ++    G ++++ ++++++  r+                g
  EPX72066.1 570 SPLSKTYQSYFEDGILTSKFevAKNALEMStscsyWRSaRDRIQSQMVvwekdvnfglaSQPDGFGMILPRIIPMGTVTRRAventwltasnakrnRLG 668
                 6999**************7776999999999****888899*****************999999**************834455555555444333677 PP

                 HHHHHTBCG.TTCCEEEEEEETTHHHHHHHHHCT.HHHH....HHH........HT.TH-HHHHHHHHHCTS.GGGHHHHHHHHHHHHHHHHHTT--HH CS
   DNA_pol_A 136 rriRkafvaeegghvllsaDysqiELRilAhlsgdekli....eaf........ke.geDiHsktAsevfgvpveevtkeqRrqaKainfGiiYGagak 221
                  ++++++ a+eg++ +++aD+++ EL+i+A + gd+++     +a+        k+ g+D+HsktA+ ++ +         R+ aK++n+G++YGag k
  EPX72066.1 669 SELKAMVRAPEGYT-FVGADVDSEELWIVAVI-GDSQFSlhgaTALswmtlegkKSdGTDLHSKTAAILGVS---------RDAAKVFNYGRLYGAGLK 756
                 788*******9765.*************8866.999999888866688899998556************999.........****************** PP

                 HHHHHHT.....SSHHHHHHHHHHHHHHSHHHH.......................HHHHHHHHHCCCE.CCEEETTCSEEEECTTT-CCHCCCHHHHH CS
   DNA_pol_A 222 gLaeqlg.....iseeeAkefiekyferypgvk.......................syleetleeakek.gyvetllgrrrylpeiksknaalrekaer 291
                 + a  l+     +++++A++++++++++++gv+                       s+++++le++++   +++++l+  ++   ++++n ++ +  ++
  EPX72066.1 757 HTALLLKqfnssLDDTQAANLAKALYKSTKGVRsevskrllsmgipahhfwskgseSFVFNKLESMAQMtFPRTPVLNAGITQ-ALSTNNLSK-SSFMT 853
                 *999995566779*****************************************************99967889999999987.888777666.666** PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SEEEEEEETTEEEEEEECCCHHHHH......HHHHHHHHHHHHS...SS--EEEEEE CS
   DNA_pol_A 292 aavNapiQGsAaDiiklamikieealkeeklkarlllqvHDElvfevpeeeveeva......elvkeamesavel...dvplkvevkv 370
                 ++vN++iQ+sA+D+++l+++++e+++++++l+arl l+vHDE+++  +++++ +va      +l++++   + +l   ++p++v++++
  EPX72066.1 854 SRVNWAIQSSAVDYLHLLVVSMEHLIRKYGLEARLSLTVHDEVRYFSTNKDRFRVAlalqvaNLWTRSF-FCHRLgfdELPQSVAFFS 940
                 ***************************************************999998888888888888.333335678999998876 PP

>> DNA_pol_A_exo1  3'-5' exonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.2   9.4e-07    0.0056     118     174 ..     268     373 ..     215     374 .. 0.66

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 9.4e-07
                     T..............................................SSHHHHHHHHHS.B---GHCCTTSSTTT..SSS-HHHHHHHHHHHHHT CS
  DNA_pol_A_exo1 118 s..............................................hsLdsLaekylg.dleldkeeqiakwqk..arplleeqllYAaeDadv 163
                                                                     sL++ a+  ++ d+ +   ++ +  +k      l+e+++Y+a D+++
      EPX72066.1 268 PtwfkakkafrqtigkesngsdddssqaefdyenfieqepwlrhvsvNSLKDVAKFHCNiDMSKATRDLFSELDKgvILQNLDEAISYCASDVHA 362
                     1555555555555555555555555555555556666666666666679999999999988888899999999999999999************* PP

                     HHHHHHHHHHH CS
  DNA_pol_A_exo1 164 llrlfkkLtke 174
                     +++++k++ ++
      EPX72066.1 363 THEVYKRILPQ 373
                     ******99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1023 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       522  (0.0291148); expected 358.6 (0.02)
Passed bias filter:                      464  (0.0258799); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.77u 0.26s 00:00:01.03 Elapsed: 00:00:00.45
# Mc/sec: 6902.12
//
Query:       EPX72067.1  [L=335]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-20   74.0   2.6    4.6e-10   39.9   0.4    2.3  2  PH        PH domain
     0.0013   19.0   0.0       0.89    9.9   0.0    2.5  2  PH_6      Pleckstrin homology domain
  ------ inclusion threshold ------
      0.084   13.0   2.2       0.12   12.5   0.3    2.2  3  Mcp5_PH   Meiotic cell cortex C-terminal pleckstrin homology
       0.13   12.3   0.2       0.27   11.2   0.2    1.5  1  NAC       NAC domain
       0.38   11.2   8.1        2.7    8.5   1.1    3.7  2  PH_11     Pleckstrin homology domain


Domain annotation for each model (and alignments):
>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.9   0.4   1.3e-13   4.6e-10       1     102 [.      23     113 ..      23     116 .. 0.91
   2 !   34.1   0.1   8.2e-12   2.9e-08       2     104 ..     232     326 ..     231     327 .. 0.87

  Alignments for each domain:
  == domain 1  score: 39.9 bits;  conditional E-value: 1.3e-13
                 EEEEEEEEEETSSSSCSEEEEEEEEETTEEEEESSTTCTTESSEEEEEESTTEEEEEEECTTSSSSTSEEEEEESTSSSTEEEEEEESSHHHHHHHHHH CS
          PH   1 vvkeGwLlkkgsgkkkswkkrwfvLkdsellyykndksekdkepkgsislsncevvevvatedpkrkfcfelriverngsrtyllqasseeerkeWika 99 
                 v k+GwL++k++    + k+ w vL++++l++yk++   k+++ k +++ ++++ v +    ++k + +f l ++   + + + + a+s+ e+++W++ 
  EPX72067.1  23 VLKSGWLIRKSHSTT-TGKHLWGVLRREKLSFYKDE---KEYKTKLIFPTQDISAVAYY---REKSPKSFYLYLN---E-KIIRFIAPSNVEAESWVRV 110
                 679**********99.9999****************...*****************875...8888888888666...4.9****************99 PP

                 HHH CS
          PH 100 iqs 102
                 ++ 
  EPX72067.1 111 LRT 113
                 975 PP

  == domain 2  score: 34.1 bits;  conditional E-value: 8.2e-12
                 EEEEEEEEETSSSSCSEEEEEEEEETTEEEEESSTTCTTESSEEEEEESTTEEEEEEECTTSSSSTSEEEEEESTSSSTEEEEEEESSHHHHHHHHHHH CS
          PH   2 vkeGwLlkkgsgkkkswkkrwfvLkdsellyykndksekdkepkgsislsncevvevvatedpkrkfcfelriverngsrtyllqasseeerkeWikai 100
                  ++G ++ ++++   +w k+w+v++++ + +y +    k+++p + i+++++++  +v+  ++ +k+ f +++      +   +++++e+ +  W++a+
  EPX72067.1 232 LMQGPIYWRHGNIH-RWSKCWAVVRGNGMTIYNSN---KEYKPVKLIPITEIQDIAEVNFFEKSQKYIFIVITL----NKPMEFRVDDEDTLILWVAAL 322
                 67788776677777.********************...*****************9984448888888888777....389****************** PP

                 HHHH CS
          PH 101 qsai 104
                 + +i
  EPX72067.1 323 KTSI 326
                 9765 PP

>> PH_6  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.0   0.00025      0.89      52     110 ..      52     112 ..      11     114 .. 0.77
   2 !    6.8   0.0    0.0021       7.7      41     108 ..     249     321 ..     232     325 .. 0.65

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00025
        PH_6  52 LffskkedkaspsgvinLadaseva...adgeqkFhltakGkkhtFkasstaeRdnWvaqlk 110
                  f+   e+    + +++ +d+s+va   ++ ++ F l  + k+ +F a+s  e + Wv++l+
  EPX72067.1  52 SFYK-DEKEYKTKLIFPTQDISAVAyyrEKSPKSFYLYLNEKIIRFIAPSNVEAESWVRVLR 112
                 4554.34444667788888888886333577899************************9987 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0021
        PH_6  41 iawAsetGkGLLffskkedkaspsgvinLadasevaa....dgeqkFhlta..kGkkhtFkasstaeRdnWvaq 108
                   wA   G+G+ +++ +++   p+ +i+++++ ++a+    + +qk+++ +    k   F+  +      Wva+
  EPX72067.1 249 KCWAVVRGNGMTIYN-SNKEYKPVKLIPITEIQDIAEvnffEKSQKYIFIVitLNKPMEFRVDDEDTLILWVAA 321
                 57************9.5555688888887776666532222556666554321444455555555555555555 PP

>> Mcp5_PH  Meiotic cell cortex C-terminal pleckstrin homology
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       1.4     5e+03       9      30 ..      36      57 ..      34      96 .. 0.62
   2 ?   -0.7   0.0       0.4   1.4e+03      87     117 ..      82     112 ..      50     116 .. 0.78
   3 ?   12.5   0.3   3.4e-05      0.12      57     118 ..     263     324 ..     213     328 .. 0.76

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 1.4
     Mcp5_PH  9 tmiGeylyKyvrkrkskgssek 30
                t++G +l+   r++k +  +++
  EPX72067.1 36 TTTGKHLWGVLRREKLSFYKDE 57
                5677777777777755542222 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.4
     Mcp5_PH  87 nksililtpdralkltaetrerhevWltaLs 117
                  ks  +  +++ +++ a+++   e W+ +L+
  EPX72067.1  82 PKSFYLYLNEKIIRFIAPSNVEAESWVRVLR 112
                 4566667778899999999999999999887 PP

  == domain 3  score: 12.5 bits;  conditional E-value: 3.4e-05
     Mcp5_PH  57 akegksksvaiesvlsvedenplpkglkefnksililtpdralkltaetrerhevWltaLsy 118
                 +++++ k v++  +++++d ++   ++k+ ++  +++t ++ +++ + +++   +W+ aL+ 
  EPX72067.1 263 NSNKEYKPVKLIPITEIQDIAEVNFFEKSQKYIFIVITLNKPMEFRVDDEDTLILWVAALKT 324
                 4455556677778888888888888887778889999***********************86 PP

>> NAC  NAC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.2   7.6e-05      0.27      12      34 ..     275     297 ..     269     298 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 7.6e-05
         NAC  12 glkeipgieeVtirksdgkvlvf 34 
                  ++ei++i eV+++ + +k++++
  EPX72067.1 275 PITEIQDIAEVNFFEKSQKYIFI 297
                 679*************9998877 PP

>> PH_11  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   1.1   0.00074       2.7       3      36 ..      27      61 ..      25     114 .. 0.76
   2 ?    3.7   1.0     0.023        83       5      40 ..     239     274 ..     233     325 .. 0.68

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00074
       PH_11  3 Gylkkkgsk..aWkrrwfavlkdgvLeyYksekkkv 36
                G+l  k++   + k+ w  vl+  +L++Yk+ek+  
  EPX72067.1 27 GWLIRKSHSttTGKHLWG-VLRREKLSFYKDEKEYK 61
                555444444568899**9.************99865 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.023
       PH_11   5 lkkkgskaWkrrwfavlkdgvLeyYksekkkvvkhv 40 
                  ++ + + W++ w +v+ +g   y  +++ k vk +
  EPX72067.1 239 WRHGNIHRWSKCWAVVRGNGMTIYNSNKEYKPVKLI 274
                 455555569999996666665555555555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (335 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       623  (0.0347482); expected 358.6 (0.02)
Passed bias filter:                      487  (0.0271627); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.54u 0.29s 00:00:00.83 Elapsed: 00:00:00.47
# Mc/sec: 2123.89
//
Query:       EPX72068.1  [L=369]
Description: protein phosphatase 2C Ptc2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-85  286.3   0.0    2.9e-85  286.0   0.0    1.1  1  PP2C      Protein phosphatase 2C


Domain annotation for each model (and alignments):
>> PP2C  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  286.0   0.0   1.6e-89   2.9e-85       2     256 ..      23     275 ..      22     277 .. 0.98

  Alignments for each domain:
  == domain 1  score: 286.0 bits;  conditional E-value: 1.6e-89
                 EEEEEEECCCCSSHHEEEECCCCTCTTCCCCCCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHCHTTHHHHHHHHHHHHHHHHHHHHHHHHHCHCCT- CS
        PP2C   2 dlgaselqgarksmedahislanlesssgkssvsffavfdghggseaakyarehleeilksqksfeelekleqalrksfladtdeelksskantepsks 100
                 ++g+s++qg+r smedah++  n+ ++s + +++ff+vfdghgg+++aky++++l+ei+k+q  f ++ ++ +al+++fl+ td+ l ++ ++ +++ s
  EPX72068.1  23 QYGLSHMQGWRISMEDAHCAVINMLQHSVNPQINFFGVFDGHGGDRVAKYCGQNLPEIIKRQHTFWKG-DYGEALKSGFLE-TDQALMRDYDM-QEDPS 118
                 68999***************************************************************.9***********.9******9999.69*** PP

                 EEEEEEEEEETTE.EEEEEESS-EEEEEETTEEEEECS---STTSHHHHHHHHHTT--EEECCEEETTTBSBSB-EE-GGGTCCCC...CCSTSB---E CS
        PP2C 101 Gstavvalirgtk.lyvAnvGDSravLcrkgnakkeltedHkpsdedEreRIeeaggsvsngegrvngsLavsRalGDlelkpket...eeqlvsaePd 195
                 G+ta++++i++++  y+An+GDSr+vL+r+g a+  l++dHkp+ + E++RI++agg+++  +grvngsLa+sRa+GD+e+k+++    e+q+v+a Pd
  EPX72068.1 119 GCTATTVMIVNDQvVYCANAGDSRTVLSRRGIAE-PLSFDHKPNIDVEKARIKAAGGFID--FGRVNGSLALSRAIGDFEYKKNSLlppEKQIVTAFPD 214
                 *************9*******************9.*************************..********************9766************* PP

                 EEEEEE-TTEEEEEEE-HHHHTTSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCCHHC CS
        PP2C 196 vtsvklteedefliLacdGlwdvlsdqeavdlvrdelekkkspeevaeelvdeaiargsed 256
                 v  +++ +edefl+LacdG+wd+ ++qe+v++vr+ + +k+ +e++ e+l+d +ia++se+
  EPX72068.1 215 VVCHTIGQEDEFLVLACDGIWDCKNSQEVVEFVRRGIVAKQPLETIGENLMDRCIASNSES 275
                 *********************************************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (369 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       323  (0.0180155); expected 358.6 (0.02)
Passed bias filter:                      283  (0.0157845); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2729.85
//
Query:       EPX72069.1  [L=418]
Description: GPI anchored cell surface protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-13   50.7   8.4     0.0001   22.4   0.5    5.3  5  Recep_L_domain   Receptor L domain
  ------ inclusion threshold ------
      0.073   12.9   0.0       0.14   12.0   0.0    1.4  1  MRP-L27          Mitochondrial ribosomal protein L27
       0.17   11.3   0.0       0.54    9.7   0.0    1.8  3  Glyco_transf_21  Glycosyl transferase family 21
       0.21   11.5   3.2       0.31   11.0   0.4    2.5  3  LRR_5            BspA type Leucine rich repeat region (6 copi


Domain annotation for each model (and alignments):
>> Recep_L_domain  Receptor L domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.5   2.3e-08    0.0001       1      60 [.      46     100 ..      46     120 .. 0.89
   2 !   12.5   0.6   2.7e-05      0.12      44      98 ..     121     172 ..     114     205 .. 0.79
   3 ?    0.6   0.0      0.14   6.1e+02      72      96 ..     234     257 ..     182     264 .. 0.62
   4 !   14.0   0.0   9.1e-06     0.041      25      61 ..     264     301 ..     244     316 .. 0.86
   5 ?   -1.2   0.0      0.48   2.1e+03      26      42 ..     310     326 ..     300     344 .. 0.76

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 2.3e-08
                     TESEEESBEEEECCHCTSBGGGGGGGGG--EESS-EEEESET-SSEGCGTT--EEESSSS CS
  Recep_L_domain   1 nCtvieGnLeitltseneeeellsflsnveeitGyllikntnlkslsflenLrvIrgrel 60 
                     nC+vi+G+++++  s+      + +++ +e + G ++i+n+n      l +L++++g+  
      EPX72069.1  46 NCQVINGSIIMNASSAV-----SLSFNRIESVVGDVIIQNNNYLASVSLTSLKSVQGELR 100
                     8************9988.....4689******************************9755 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 2.7e-05
                     SSEGCGTT--EEESSSSBTTTEEEEEES-TT-SBEE-TTTSEESSSEEEEESETT CS
  Recep_L_domain  44 kslsflenLrvIrgrelfeskyalaildnknleeLglpslkeitsgsvviskNpk 98 
                      +l++l+nL+ Ir ++ +++ ++l i d + l+ L   slk+ +s  +++ +N+ 
      EPX72069.1 121 LNLRILPNLQGIRFDKGVKEANVLRIEDTQ-LSTLDGISLKKTES--MIVVNNNY 172
                     578999999999999999999999999998.88999999886555..44444443 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.14
                     -TT-SBEE-TTTSEESSSEEEEESE CS
  Recep_L_domain  72 nknleeLglpslkeitsgsvviskN 96 
                     n+ ++e++ p+++ i + s+++  N
      EPX72069.1 234 NSTMKEVSCPNITSIGQ-SLFFVGN 257
                     44556666666665555.5555555 PP

  == domain 4  score: 14.0 bits;  conditional E-value: 9.1e-06
                     GGGG--EESS-EEEESE.T-SSEGCGTT--EEESSSSB CS
  Recep_L_domain  25 flsnveeitGylliknt.nlkslsflenLrvIrgrelf 61 
                      ++++e+i G ++i n+ +lk+++ +++Lr+++g+  f
      EPX72069.1 264 DFKQLETIGGTFMIFNNpELKQIKGFSKLRTVAGSIDF 301
                     699*****************************997655 PP

  == domain 5  score: -1.2 bits;  conditional E-value: 0.48
                     GGG--EESS-EEEESET CS
  Recep_L_domain  26 lsnveeitGyllikntn 42 
                     l+ ++ ++G l++++++
      EPX72069.1 310 LPALKDVKGGLNLQSSS 326
                     77889999999999883 PP

>> MRP-L27  Mitochondrial ribosomal protein L27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   3.2e-05      0.14      35      72 ..     165     201 ..     149     218 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 3.2e-05
                 EEEE-TTTS-EE-----TT----SEE-TTS-------- CS
     MRP-L27  35 kyveirekvrelvvPdlegfkLKpyVsykapevkqsel 72 
                   v++++  re+  P le++k K yVsy+a e++ + l
  EPX72069.1 165 MIVVNNNYLREVNMPYLENVKGKFYVSYNAREISVK-L 201
                 557789999**********************99876.5 PP

>> Glyco_transf_21  Glycosyl transferase family 21
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       1.5   6.6e+03      85     115 ..      57      86 ..      47      89 .. 0.72
   2 ?   -3.3   0.0       1.2   5.5e+03      41      57 ..     166     182 ..     164     226 .. 0.72
   3 ?    9.7   0.0   0.00012      0.54      90     123 ..     260     293 ..     241     296 .. 0.82

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 1.5
  Glyco_transf_21  85 ntlagvlqaklsglgfavGksmalrreaLea 115
                      n+ ++v  + + +++ +vG +++ + + L++
       EPX72069.1  57 NASSAVSLS-FNRIESVVGDVIIQNNNYLAS 86 
                      666677777.889999999888877777665 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.2
  Glyco_transf_21  41 vrvkpdyLeellaaled 57 
                      ++v+ +yL+e+  +  +
       EPX72069.1 166 IVVNNNYLREVNMPYLE 182
                      67888888887666554 PP

  == domain 3  score: 9.7 bits;  conditional E-value: 0.00012
  Glyco_transf_21  90 vlqaklsglgfavGksmalrreaLeaiGGfeala 123
                      +++ ++++l+++ G +m+++   L++i Gf +l+
       EPX72069.1 260 LASIDFKQLETIGGTFMIFNNPELKQIKGFSKLR 293
                      344489************************9986 PP

>> LRR_5  BspA type Leucine rich repeat region (6 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.1      0.26   1.2e+03      21      64 ..      46      89 ..      37     143 .. 0.57
   2 ?   -1.5   0.0       0.5   2.3e+03      67      88 ..     158     179 ..     126     214 .. 0.53
   3 ?   11.0   0.4     7e-05      0.31      53     116 ..     232     295 ..     185     305 .. 0.68

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.26
       LRR_5 21 svtsIgeyaFsnctslksitlpsslteigsyaFsncssltsiti 64
                +++ I+ +   n +s  s++++   + +g+ + +n + l s+++
  EPX72069.1 46 NCQVINGSIIMNASSAVSLSFNRIESVVGDVIIQNNNYLASVSL 89
                33333333334444444444443333334444444333333333 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.5
       LRR_5  67 sltsigeyaFsncsslkeitlp 88 
                 sl++ ++ +  n++ l+e+++p
  EPX72069.1 158 SLKKTESMIVVNNNYLREVNMP 179
                 4555555555555555555554 PP

  == domain 3  score: 11.0 bits;  conditional E-value: 7e-05
       LRR_5  53 Fsncssltsitipssltsigeya.Fsncsslkeitlpsnlttigssa..Fsncslesitipssvtki 116
                 F n+  +++++ p ++tsig++  F +++ l +i++ ++l+tig     F+n +l++i+  s+++++
  EPX72069.1 232 FLNS-TMKEVSCP-NITSIGQSLfFVGNTDLASIDF-KQLETIGGTFmiFNNPELKQIKGFSKLRTV 295
                 5555.66666665.6666666641446667777777.566666654323555577777666665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (418 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       634  (0.0353617); expected 358.6 (0.02)
Passed bias filter:                      487  (0.0271627); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.30s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 2894.98
//
Query:       EPX72070.1  [L=934]
Description: CBF1/Su(H)/LAG-1 family transcription factor Cbf12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.8e-33  114.1   0.1    1.1e-32  113.3   0.1    1.4  1  BTD           Beta-trefoil DNA-binding domain
    4.9e-24   85.7   0.1    1.3e-23   84.4   0.1    1.7  1  LAG1-DNAbind  LAG1, DNA binding


Domain annotation for each model (and alignments):
>> BTD  Beta-trefoil DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.3   0.1   1.3e-36   1.1e-32       1     153 []     603     797 ..     603     797 .. 0.91

  Alignments for each domain:
  == domain 1  score: 113.3 bits;  conditional E-value: 1.3e-36
         BTD   1 lcIasGtkvaLFnRlrsqtvstryLhv................................egaafaassrkWeaFtih.lledekgeneefsvr.dgfvk 65 
                 ++I +G++v+LFnR+r+q++++++L+                                 e++ ++++s  We+F+i  + e +kg+ +  ++    +++
  EPX72070.1 603 MSICHGDCVSLFNRYRAQHNNALFLSTskmcqvlsdkstrmktsgnffpdidtptvaenEQGRLIMTSDTWEPFYILsVEELKKGNGSVAANTqRVVLS 701
                 89***********************77777888999*********************999999*************97888888888855555367778 PP

         BTD  66 ygsvvklvdsvtgvalpkliirKvdkqkvlLdasasdepvsqLhkcafqlkdte.llYlclsqdkiiqfqatelpkdpn.......revlndgaaW 153
                  +++v+lv+++tgv++p+l+++K +++kv+++ + s+e+ ++L+k+afq+  ++ +l +++ ++ ++ ++ +e + +++       ++vl+++a+W
  EPX72070.1 702 FDTLVILVSKITGVQSPPLVLKKRENWKVSISCTKSHESFNCLSKLAFQCPVSKkFLSIDELNSGEVGYTEGEFQFNDKlnpsratHSVLPWSAMW 797
                 8999**********************************************98776999**********999999554444888999********** PP

>> LAG1-DNAbind  LAG1, DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.4   0.1   1.4e-27   1.3e-23       2     151 .]     452     602 ..     451     602 .. 0.73

  Alignments for each domain:
  == domain 1  score: 84.4 bits;  conditional E-value: 1.4e-27
  LAG1-DNAbind   2 iilhakvAQKSYGtEkRflcPppivyLlGsgWkak..eetkeskeaelaapkltislsgedaeeesqllesigvsgkvseqesqelklv.ldgkcaa 95 
                    i++++v+QKSYG+E+R+lcPp ++y lG +W +   +e+  +++  + a++ + s s    ++  + +++++  ++ s +++q +kl+ ++  +++
    EPX72070.1 452 NICMPSVCQKSYGNERRYLCPPIVLYFLGVNWFNYesDEMVIMSNIVKDAEDENLSKSILYYNTDGKEISFYS-EKRASANHEQCQKLNpVWASTML 547
                   599*****************************99855333344555555555666666666777778888888.55555555555555558999*** PP

  LAG1-DNAbind  96 ktlyisdsdekrk.evellvkllapngeeaalgsfeskpikviSkpskkrqslKntd 151
                   kt+y++ ++e  k   +++++l++ ++++ +l  +++ ++ viSkps+kr+ +K +d
    EPX72070.1 548 KTIYYTGTGEHDKlGRSMQLQLQIDTKNK-QL-GIDKVRLGVISKPSQKRALAKVSD 602
                   *****977665542344555555555434.45.578999*************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (934 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       494  (0.0275531); expected 358.6 (0.02)
Passed bias filter:                      320  (0.0178482); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.69u 0.25s 00:00:00.94 Elapsed: 00:00:00.44
# Mc/sec: 6411.71
//
Query:       EPX72071.1  [L=396]
Description: chorismate synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.4e-138  461.1   0.2   1.7e-138  460.9   0.2    1.0  1  Chorismate_synt  Chorismate synthase


Domain annotation for each model (and alignments):
>> Chorismate_synt  Chorismate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  460.9   0.2  9.2e-143  1.7e-138       1     327 []       8     380 ..       8     380 .. 0.96

  Alignments for each domain:
  == domain 1  score: 460.9 bits;  conditional E-value: 9.2e-143
                      SEEEEE-SCCSSEEEEEEE---BT-B--HHHHHHHHHHHTCTSSSSSSHHHCS-EEEEESSEETTEE-SS-EEEEEE-TTS-..SSSSSTSBE- CS
  Chorismate_synt   1 lrvttfGeShgkalgavidgvpagleldeediqkeLdrRrpgqsklttqrkEkDeveilsGvfegktlGtpiallieNkdqrskdyeeikevpR 94 
                      ++vtt+GeSh++++g++++g+p+g++l+eed+q +L+rRrpgqs+ltt+r+EkD+v+i sG++ g+tlGtp+ +++ N+dq+++dy++++++pR
       EPX72071.1   8 FKVTTYGESHCRSVGCIVEGCPPGMNLTEEDVQVQLTRRRPGQSNLTTPRNEKDRVHIQSGTEFGVTLGTPVGMMVLNQDQKPHDYSDMDNYPR 101
                      89************************************************************77****************************** PP

                      TTSTCHHHHHHC-S.STHCCCCCTHHCHHHHHHHHHHHHHHHHT.TTEEEEEEEEEETTE.................................. CS
  Chorismate_synt  95 pgHADltyalkYgirdlrgggrsSaReTaarvaaGavakklLke.lgieivayvssigei.................................. 153
                      p+HAD+ty +kYg+++++gggrsSaReT++rvaaGa+a+k+L+e +gieiva+vs++g+i                                  
       EPX72071.1 102 PSHADYTYLEKYGVKASSGGGRSSARETIGRVAAGAIAEKYLREaFGIEIVAFVSAVGKIaiplhqtktsssaaddetddydspitpeylkfld 195
                      *******************************************988************888888888999999999999999999999999999 PP

                      ....CHHHHHTT-BS-CCCHHHHHHHHHHHHHTT--B-EEEEEEEES--TT-SBTTTB-HHHHHHHHHHTSTTEEEEEETTGGGGGGSBHHHHS CS
  Chorismate_synt 154 ....ekeaenpvrcpdeeaaeemeeaieeakkegdslGgvvevvvkgvpaGlGepvfdkldakLakalmsipAvkgveiGsGfeaaelkGsean 243
                          e+  ++ +rcp++e+a++m+e+i++a++++ds+Gg+v++v+++vp+GlGep+fdk++akLa+a+msipA+k++eiGsG e+++++Gs++n
       EPX72071.1 196 eitrEEVDKTMIRCPHAETANKMSERIARARDSHDSIGGTVTCVIRNVPTGLGEPCFDKIEAKLAHAMMSIPATKSFEIGSGREGCKVPGSAHN 289
                      98743336669*********************************************************************************** PP

                      --EE...EE.....SS-TTTTEETTEEBSS-EEEEEEE--SS--SSEEEEEBTTS-E-EEEE--S-S-S-THHHHHHHHHHHHHHHHHHHHH CS
  Chorismate_synt 244 Deiv...lr.....ktnnaGGieGGisnGepivvrvavKpipsiakeqktvdletkeevelevkgrhDpcvvpravvvveamvalvladall 327
                      D++v   ++     ++nn+GGi+GGisnGe+i+++v +K+ ++i keq t  +++++   l++kgrhDpcvvpra+++ve+m+alv++da++
       EPX72071.1 290 DPFVrnpVTgklgtSSNNSGGIQGGISNGENIYFTVGFKSPATIGKEQPTTRYDGSD-GVLAAKGRHDPCVVPRAIPIVETMAALVVMDAVM 380
                      ****6661156667*******************************************.*******************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (396 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       426  (0.0237604); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2813.00
//
Query:       EPX72072.1  [L=673]
Description: CAMKK/ELM protein kinase Ssp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.1e-61  208.5   0.0    1.5e-61  208.1   0.0    1.2  1  Pkinase         Protein kinase domain
    1.3e-32  113.1   0.0    1.8e-32  112.7   0.0    1.1  1  Pkinase_Tyr     Protein tyrosine kinase
      1e-06   28.3   0.0    1.7e-06   27.6   0.0    1.3  1  Kinase-like     Kinase-like
    0.00032   19.6   0.2    0.00074   18.4   0.0    1.7  2  Pkinase_fungal  Fungal protein kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  208.1   0.0   3.3e-65   1.5e-61       1     263 [.     136     409 ..     136     410 .. 0.93

  Alignments for each domain:
  == domain 1  score: 208.1 bits;  conditional E-value: 3.3e-65
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH........HHHHHHHHHHHHHSCTTB--EEEEEEE..SSEEEEEEE--TTEBHHHHH CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkke........kkvlrEikilkklkhpnivrlyevfee..kdelylvleyveggeladll 89 
                 ye l+++G+G  GkV  ++e +t++  A+K+i k +++ k          +kv+rEi+ilkk+ hpn+vrl ev+ +  ++++ylvle+++gge++   
  EPX72072.1 136 YEILSEIGRGMHGKVKLGREVNTKELLAIKIIPKTERRPKLGransgsqkEKVRREIAILKKCIHPNVVRLREVIDDpnSTKVYLVLECMNGGEIQWSE 234
                 78899*****************************99998766777888889*************************977889************99999 PP

                 HHHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS......BCTTTSCGGGS-HHHH......TTSCBSH CS
     Pkinase  90 erkgslseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk......ltsfvgtseYlAPEvl......keneysk 176
                 +++  ls e+a+++++ ++ gleylH +giiHrD+Kp+N+L++++g +Ki+DFG++  ++s+ +      l + vgt+ + APE+        + ++s+
  EPX72072.1 235 NQSPFLSVEQARQYFRDVVCGLEYLHYQGIIHRDIKPANLLLSSSGCVKISDFGVSYIARSGLNeendveLVKTVGTPAFFAPELCwtdldrPRPKISE 333
                 99999***************************************************9999988888999999*************999988334566** PP

                 HHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGG CS
     Pkinase 177 kvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpy 263
                 ++DvW+lG +l++ll+g+ pf+++ + e + k++++            +++p+  +i ++ +dll++ll+kdp++R+t +e+++hp+
  EPX72072.1 334 AIDVWALGATLFCLLFGRCPFQASMEYELFDKIVNE-----------PLQIPNVPDIGDDGRDLLNRLLDKDPNTRITLAEVKRHPW 409
                 **********************66666655555555...........6899***********************************9 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.7   0.0     4e-36   1.8e-32       3     257 ..     138     406 ..     136     407 .. 0.87

  Alignments for each domain:
  == domain 1  score: 112.7 bits;  conditional E-value: 4e-36
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEEST.....TSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEE..SSSSEEEEEE--TTEBHHHHHH CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlke.....eateeekeelleeakimkklkhpnivkllgvct..keepllivteyvkgGdLlkfLr 93 
                  + +++G+G  GkV  g+  ++ke   +k++ Kt ++      ++ ++ke++ +e++i+kk+ hpn+v+l  v+   ++ ++++v+e ++gG+++    
   EPX72072.1 138 ILSEIGRGMHGKVKLGREVNTKELLAIKIIPKTERRpklgrANSGSQKEKVRREIAILKKCIHPNVVRLREVIDdpNSTKVYLVLECMNGGEIQWS-- 233
                  6689*************99555555555555544323333355667799*************************888888************9865.. PP

                  HTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTH...EETTTSSEEEETTSSTSGGGGS-HHHHHHSE......E CS
  Pkinase_Tyr  94 kkekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLa...rdiekddeyvkkeeaklpvkWmapEslkekk......f 182
                  +++++ l++++  ++  +v +G+eyL+ + ++Hrd+   N Lls++ +vkisDfG++   r+  ++++ v+  ++     + apE   +        +
   EPX72072.1 234 ENQSPFLSVEQARQYFRDVVCGLEYLHYQGIIHRDIKPANLLLSSSGCVKISDFGVSyiaRSGLNEENDVELVKTVGTPAFFAPELCWTDLdrprpkI 331
                  4457***************************************************752226667888889999999999******988777788899* PP

                  EHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHH.HTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 183 tsksDvWsfGvllwEiftlgespypglkneevlekl.kegkrlekpekcpeelyelmkkcweedpeeRptfselve 257
                  +++ DvW+ G +l+ ++  g+ p++  ++ e+++k+ +e  ++++  ++ ++  +l+++ +++dp+ R t++e+ +
   EPX72072.1 332 SEAIDVWALGATLFCLLF-GRCPFQASMEYELFDKIvNEPLQIPNVPDIGDDGRDLLNRLLDKDPNTRITLAEVKR 406
                  **************9998.********999999998789999*****************************99865 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   0.0   3.7e-10   1.7e-06     153     255 ..     252     359 ..     231     398 .. 0.70

  Alignments for each domain:
  == domain 1  score: 27.6 bits;  conditional E-value: 3.7e-10
  Kinase-like 153 lirlaanLqakglvhgkftvdnllldekgglmlggfta..Lvragtkvvlseve.......kgfaPpEllgsrggytrknktkmthkldaWqlGlviy 241
                  ++    +L+ +g++h ++++ nlll   g +++ +f+   + r g +   + ve        +f  pEl+        + + k++ ++d+W+lG++ +
   EPX72072.1 252 VVCGLEYLHYQGIIHRDIKPANLLLSSSGCVKISDFGVsyIARSGLNEE-NDVElvktvgtPAFFAPELCWTDLD---RPRPKISEAIDVWALGATLF 345
                  5555679***************************997511566666666.7777885555656666677766443...46789*************** PP

  Kinase-like 242 riwclklPltlate 255
                   +     P++   e
   EPX72072.1 346 CLLFGRCPFQASME 359
                  99999999987655 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   1.6e-07   0.00074     304     384 ..     241     318 ..      97     323 .. 0.82
   2 ?   -2.6   0.5      0.38   1.7e+03     247     270 ..     491     528 ..     452     551 .. 0.62

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 1.6e-07
  Pkinase_fungal 304 spkellealrDaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesga...rertGTleFmaie 384
                     s++++ + +rD++ g++ L+  +gi+HrDi   N+l+      ++ +  ++D+ +        +e+++    + +GT++F a e
      EPX72072.1 241 SVEQARQYFRDVVCGLEYLH-YQGIIHRDIKPANLLLS-----SSGCVKISDFGVSYIARSGLNEENDvelVKTVGTPAFFAPE 318
                     556666789***********.****************9.....67888888887655444333333333457788999998855 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.38
  Pkinase_fungal 247 e..............lsskaevklkksesskkvekrsv 270
                     +              ++++ + +++++esskk ++ + 
      EPX72072.1 491 AlsptqlsdsfnhmsVDKQDKNAGESEESSKKANTGEE 528
                     03333333444444577777777777777777665444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (673 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       787  (0.0438954); expected 358.6 (0.02)
Passed bias filter:                      520  (0.0290033); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.62u 0.28s 00:00:00.90 Elapsed: 00:00:00.43
# Mc/sec: 4682.47
//
Query:       EPX72073.1  [L=150]
Description: histone lysine methyltransferase Set7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.5e-13   50.3   0.1    3.9e-11   43.6   0.1    2.1  1  SET       SET domain


Domain annotation for each model (and alignments):
>> SET  SET domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.6   0.1   2.2e-15   3.9e-11       1     169 []      20     117 ..      20     117 .. 0.86

  Alignments for each domain:
  == domain 1  score: 43.6 bits;  conditional E-value: 2.2e-15
                 SCEEEESSXBXTTXEEEEEEECCEECHHHHHHHHHH....HTEEEEEXGGXXGGSXHHHHHHHTTSSHHHHHHHHHHHHHHHHHHTHHHHHHHXTTTSX CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         SET   1 GrGvfAtedIpkgeficeypeeiiltkdeadksele....aylfslpeapknlaftkelakasastllqklakdqkqaekedtdaalkasskaesdlna 95 
                 GrGvfA+e++p+++ i e+ + +++ kd++++++++    +y   ++                                                    
  EPX72073.1  20 GRGVFALEPLPAHTCI-EVSPVLLFEKDQYVNHGQYtvlnEYTYVWS---------------------------------------------------- 65 
                 9***************.9****************9977777777777.................................................... PP

                 XXHCCCCCHCCCHEEEETEEEEEECCCGTTGGGCEEXSSSSEEEEEEEETTSSEEEEEESSXBXTTEEEEEXTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         SET  96 skpeagafsaiagysidaralksgngagplarflNHsCdpNcnltvqnvlrgprvavfAtrdIkkGeEltidYg 169
                                  +  +        l++++NH+  pN++   +    ++++ +f++rdI + eEl+i+Yg
  EPX72073.1  66 -----------------SGRQGLAL---GLGSMFNHDRCPNVYRKKDE--LNRCISYFTLRDIHPCEELCISYG 117
                 .................33333333...3469*****77***777777..***********************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       279  (0.0155614); expected 358.6 (0.02)
Passed bias filter:                      246  (0.0137208); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.22s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 1176.18
//
Query:       EPX72074.1  [L=957]
Description: diacylglycerol binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.7e-50  169.4   1.0    1.4e-49  168.6   1.0    1.4  1  DENN      DENN (AEX-3) domain
    1.5e-15   57.7   0.3      6e-15   55.8   0.3    2.1  1  uDENN     uDENN domain
    2.2e-07   30.7   2.3    2.2e-07   30.7   2.3    2.4  2  dDENN     dDENN domain
     0.0017   18.6   0.5     0.0045   17.2   0.5    1.7  1  SAM35     SAM35, subunit of SAM coomplex
      0.005   16.2   0.1      0.016   14.6   0.1    2.0  1  DUF2093   Uncharacterized protein conserved in bacteria (DUF2
  ------ inclusion threshold ------
      0.074   13.0   0.2       0.18   11.7   0.2    1.6  1  SPA       Stabilization of polarity axis


Domain annotation for each model (and alignments):
>> DENN  DENN (AEX-3) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  168.6   1.0   4.6e-53   1.4e-49       1     186 []     361     561 ..     361     561 .. 0.95

  Alignments for each domain:
  == domain 1  score: 168.6 bits;  conditional E-value: 4.6e-53
        DENN   1 yipkalcilsrlpffelf.kkiLkalekrlksssk............eaplesfianlllevplPapgktlklvslaveekillqrpe.dselPl.edv 84 
                 ++pka++il+r p++++f +++L++++++l  ++             + ++e++i+n++ e+plP+ g +++     v   +l+++++  +e+P  +dv
  EPX72074.1 361 WLPKAYGILTRRPYLQSFcRDWLRIICSSLLVDELdyippadvaflrNMSIEAYIKNICNEIPLPPRGLSQTR--VEVGPLQLCAFRSpLNEIPGwNDV 457
                 79****************************999999**********99*************************..6799999999999889******** PP

        DENN  85 dlkelfrcLsienilqlfeavLlErriillSeklarLtsvaealvallyPlkWqhiyiPvlpaslldvleaPtPfiiGvesslleleekpledvvlv.. 181
                 dl++lfr+L+  ni++lfea+LlE++i++lS+++++L++++ alv+llyPl+Wq+++iPvl+++l+++leaP+++iiG+ s+  +le+ + + + lv  
  EPX72074.1 458 DLYPLFRTLDFWNIISLFEAALLESKILFLSKSISMLSYASFALVHLLYPLEWQGLFIPVLSRRLISCLEAPCSYIIGISSDAIALESLQSDSIPLVvc 556
                 *************************************************************************************88888888766655 PP

        DENN 182 Dldkn 186
                 Dld+n
  EPX72074.1 557 DLDNN 561
                 99986 PP

>> uDENN  uDENN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.8   0.3     2e-18     6e-15       1      64 [.     186     254 ..     186     255 .. 0.79

  Alignments for each domain:
  == domain 1  score: 55.8 bits;  conditional E-value: 2e-18
       uDENN   1 PevldryPp.....adhe.......dfppedvplFcfPeglewsssteksserpepefFsFvLTdedgsrvYGaCl 64 
                 P++l+ryP      +  e       +fp + vp+F+fP+++    ++e+s +rp++++++F LT+ed+s+vYG+Cl
  EPX72074.1 186 PSLLQRYPSskdigT--EstncyrwEFP-NYVPMFVFPNDI----TIERSPTRPASTHHTFALTSEDNSKVYGICL 254
                 89*******555551..03444433344.67********95....6789999***********************9 PP

>> dDENN  dDENN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.7   2.3   7.5e-11   2.2e-07       1      49 [.     865     913 ..     865     914 .. 0.97
   2 ?   -4.1   1.1       5.6   1.7e+04       4      17 ..     931     944 ..     930     944 .. 0.73

  Alignments for each domain:
  == domain 1  score: 30.7 bits;  conditional E-value: 7.5e-11
       dDENN   1 FdkeaFlksqpkshrpFlsrfletQmFarFIderlelsgsdpsldlFDe 49 
                 F+   F ++++k h + + +f++tQ+F++F+++r +++ +dp+++lFD+
  EPX72074.1 865 FNFRKFARQSSKIHGDWIFSFCNTQAFSEFVSDRSHVDPNDPKIALFDQ 913
                 89999********************************999********9 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 5.6
       dDENN   4 eaFlksqpkshrpF 17 
                  +Fl++++ + ++F
  EPX72074.1 931 TSFLQDRSFEFQKF 944
                 57888888777776 PP

>> SAM35  SAM35, subunit of SAM coomplex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.5   1.5e-06    0.0045      15      90 ..     843     922 ..     827     942 .. 0.69

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 1.5e-06
       SAM35  15 PlktYepveksdeaakkeiesrsyeFeg..nskseksendtfkLgvynvfeesetdsv..LatdP.lclfaqLalckknnl 90 
                 P ++Y + +++++ +  + ++ s++F++  +++s+ +++  f+ +  + f+e  +d     ++dP ++lf qL lc+knn 
  EPX72074.1 843 PYRQYFQKKDENR-QAGQRKNESFNFRKfaRQSSKIHGDWIFSFCNTQAFSEFVSDRShvDPNDPkIALFDQLLLCEKNNG 922
                 6667744444333.334568999999652156667778888999999998865554443389***789***********95 PP

>> DUF2093  Uncharacterized protein conserved in bacteria (DUF2093)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.1   5.5e-06     0.016       4      21 ..     780     797 ..     777     814 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 5.5e-06
     DUF2093   4 pGsfVlCAvtgkkIpLde 21 
                 +Gs+V+CAv+g++ +   
  EPX72074.1 780 TGSHVVCAVSGAPLEQTH 797
                 7**********9876555 PP

>> SPA  Stabilization of polarity axis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.2   6.1e-05      0.18      14      92 ..     470     541 ..     465     565 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 6.1e-05
         SPA  14 eiillinalltskriivlstkasadevsefvLalsnlispagdvlrgfknnsfPyvdlseldalekvpgyIvGvtNPiF 92 
                 +ii l++a l++ +i++ls++ s+  +s +  al  l +p  + +  f    +P  +   ++ le+  +yI+G++  ++
  EPX72074.1 470 NIISLFEAALLESKILFLSKSISM--LSYASFALVHLLYP-LEWQGLF----IPVLSRRLISCLEAPCSYIIGISSDAI 541
                 68999******************9..88888888888888.4555445....99999999*************986655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (957 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       522  (0.0291148); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.69u 0.25s 00:00:00.94 Elapsed: 00:00:00.43
# Mc/sec: 6677.96
//
Query:       EPX72075.1  [L=230]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2939  (0.163924); expected 358.6 (0.02)
Passed bias filter:                      521  (0.0290591); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.31s 00:00:00.86 Elapsed: 00:00:00.47
# Mc/sec: 1475.38
//
Query:       EPX72076.1  [L=131]
Description: ubiquinol-cytochrome-c reductase complex subunit 6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-39  133.8   0.7    2.1e-39  133.5   0.7    1.1  1  UCR_14kD  Ubiquinol-cytochrome C reductase complex 14kD subun


Domain annotation for each model (and alignments):
>> UCR_14kD  Ubiquinol-cytochrome C reductase complex 14kD subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.5   0.7   1.2e-43   2.1e-39       2     100 .]      15     113 ..      14     113 .. 0.98

  Alignments for each domain:
  == domain 1  score: 133.5 bits;  conditional E-value: 1.2e-43
    UCR_14kD   2 llskllkplakwyanaagyrklGLrydDllseenedvqeALrrLpeeeaydRvfRlkrAlqlslkhklLPkeewtkpeedvrYlkpyieevekeaaere 100
                 +l kllkp++++y+n++gyrk+GLrydDl  een++v++AL+rLpe+e+ dRv+R++rA+ql++++k+LPk+ewtk eed+ Yl+p++++v +e++ere
  EPX72076.1  15 FLYKLLKPVSQAYINLSGYRKFGLRYDDLTLEENDVVEKALSRLPEHESFDRVYRIRRAMQLNIENKILPKSEWTKSEEDTLYLRPIVKRVMEEKQERE 113
                 6899*********************************************************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       626  (0.0349155); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.35s 00:00:00.94 Elapsed: 00:00:00.58
# Mc/sec: 682.01
//
Query:       EPX72077.1  [L=572]
Description: integral inner nuclear membrane protein Ima1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-28  100.2   3.2    1.6e-28  100.2   3.2    2.5  2  Ima1_N          Ima1 N-terminal domain
  ------ inclusion threshold ------
      0.052   13.0   0.8       0.17   11.3   0.0    2.3  2  Vps36-NZF-N     Vacuolar protein sorting 36 NZF-N zinc-finger
      0.092   12.5   3.2      0.059   13.1   1.1    1.7  2  zf-MIZ          MIZ/SP-RING zinc finger
       0.17   11.9   5.7        7.2    6.7   2.2    2.7  2  DZR             Double zinc ribbon
       0.37   10.9   6.9       0.14   12.2   3.0    2.4  2  zf-Sec23_Sec24  Sec23/Sec24 zinc finger
       0.37   10.9   1.8        4.9    7.2   0.0    2.6  2  CpXC            CpXC protein
       0.63   10.3   4.8       0.19   12.1   1.2    2.0  2  zinc_ribbon_9   zinc-ribbon
       0.71    9.9   3.6       0.47   10.5   1.0    2.0  2  RNHCP           RNHCP domain
        2.5    8.0   8.3         11    5.9   1.1    2.9  3  PHD             PHD-finger


Domain annotation for each model (and alignments):
>> Ima1_N  Ima1 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.2   3.2     8e-32   1.6e-28       2     132 ..      29     150 ..      28     153 .. 0.89
   2 ?   -1.0   3.3       1.5     3e+03      65     118 ..     398     469 ..     352     484 .. 0.55

  Alignments for each domain:
  == domain 1  score: 100.2 bits;  conditional E-value: 8e-32
      Ima1_N   2 nCffCnkkskvkyeekns.feCpsCeayNgfdedGdindeipeqeeeslneaakkaaaskskskseeaessssssllCskClknqelkvsklaeylpke 99 
                 +Cf Cn++ k +++++++ ++Cp Cea N+fd++G+++d+ p++  + +++a++         + +  e+++++s++C++Cl+nq l+++ la++lp  
  EPX72077.1  29 RCFSCNQHVKLSRNGSMReWTCPLCEAPNHFDDNGEVVDYRPPTPPSYETSAPNF-------LS-RFVEKTPTKSPFCEDCLRNQLLVNRMLADFLP-- 117
                 6**************9999********************9999888777722222.......22.23567789************************.. PP

      Ima1_N 100 deddpeyeekeealeeykkeleerYpqlCesCe 132
                 ++++p+y+++e+a+++yk++lee++p++C++C 
  EPX72077.1 118 EQNHPDYKAYEAAFPKYKESLEEKFPIVCDNCY 150
                 9*******************************6 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 1.5
      Ima1_N  65 s...................eeaessssssllCskClknqelkvskl....aeylpkededdpeyeekeealeeykk 118
                 s                   ++ e  ++ss++ skC++ q++ ++       + +p+  +  pe    +++l++ykk
  EPX72077.1 398 SshfrklsempkispisnlqKKLEALPTSSPYSSKCSRFQNMPQNYRgkdsIKVTPT--DIRPE---VMKELNQYKK 469
                 034444444444555555555667777888888888887777655430000333443..23333...3444444443 PP

>> Vps36-NZF-N  Vacuolar protein sorting 36 NZF-N zinc-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   8.4e-05      0.17       6      26 ..      44      64 ..      40      74 .. 0.79
   2 ?   -2.9   0.1       2.3   4.6e+03      28      39 ..      90     101 ..      82     101 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 8.4e-05
  Vps36-NZF-N  6 vtatWvCpICsfsNevpsnfd 26
                 ++++W+Cp C   N+++ n +
   EPX72077.1 44 SMREWTCPLCEAPNHFDDNGE 64
                 5789***********988765 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2.3
  Vps36-NZF-N  28 nastplPpClaC 39 
                  +  t+ P C+ C
   EPX72077.1  90 KTPTKSPFCEDC 101
                  556789***999 PP

>> zf-MIZ  MIZ/SP-RING zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   1.1     3e-05     0.059      25      49 ..      29      55 ..      26      56 .. 0.87
   2 ?   -3.8   0.0       5.7   1.1e+04      13      22 ..      90      99 ..      90     100 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 3e-05
                --EEHHHHHHHHHHS--..-B-TTT-- CS
      zf-MIZ 25 qCfdlesylelnertet..WnCPvCsk 49
                 Cf ++  ++l+++ +   W CP+C++
  EPX72077.1 29 RCFSCNQHVKLSRNGSMreWTCPLCEA 55
                5*******99999887677******97 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 5.7
                SSEEEETT-- CS
      zf-MIZ 13 kiPvrgekCk 22
                k+P+++ +C+
  EPX72077.1 90 KTPTKSPFCE 99
                5799999996 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   2.2    0.0036       7.2      12      42 ..      27      61 ..       9      63 .. 0.78
   2 ?    5.7   0.1    0.0074        15       7      39 ..      90     154 ..      88     159 .. 0.79

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0036
         DZR 12 arfCseCgtklkavaa....edrCpsCgekvdpea 42
                 + C+ C++++k   +    e +Cp C+++++ ++
  EPX72077.1 27 VKRCFSCNQHVKLSRNgsmrEWTCPLCEAPNHFDD 61
                56799999998754448899999999999987665 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0074
         DZR   7 elppdarfCseCgtk...lkavaa................................edrCpsCgekvd 39 
                 ++p ++ fC++C  +   ++   +                                +++C++C  +v+
  EPX72077.1  90 KTPTKSPFCEDCLRNqllVN---RmladflpeqnhpdykayeaafpkykesleekfPIVCDNCYGPVH 154
                 56788889999988755533...334488888888999999999999999999999999999987765 PP

>> zf-Sec23_Sec24  Sec23/Sec24 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   3.0     7e-05      0.14      12      37 ..      34      61 ..      28      62 .. 0.76
   2 ?   -1.3   0.1       1.2   2.3e+03       1       7 [.     143     149 ..     143     151 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 7e-05
  zf-Sec23_Sec24 12 Npfckidfggkr..wiCnfCnhknevpp 37
                    N ++k   +g++  w+C++C+  n++ +
      EPX72077.1 34 NQHVKLSRNGSMreWTCPLCEAPNHFDD 61
                    77888877774445***********975 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 1.2
  zf-Sec23_Sec24   1 PirCrrC 7  
                     Pi C +C
      EPX72077.1 143 PIVCDNC 149
                     99***** PP

>> CpXC  CpXC protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.5     0.061   1.2e+02      17      50 ..       7      40 ..       4      42 .. 0.91
   2 ?    7.2   0.0    0.0024       4.9      31      50 ..      41      60 ..      36      72 .. 0.85

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.061
        CpXC 17 sidadedpelkeklldgslfeatCpkCgatakle 50
                si  +e+p+ k++  +g  +  +C +C++ +kl+
  EPX72077.1  7 SIVCKEEPDQKNRTSTGHKTVKRCFSCNQHVKLS 40
                78889************************99885 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0024
        CpXC 31 ldgslfeatCpkCgatakle 50
                ++gs++e+tCp C+a ++++
  EPX72077.1 41 RNGSMREWTCPLCEAPNHFD 60
                79************988876 PP

>> zinc_ribbon_9  zinc-ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.2   9.3e-05      0.19       5      28 ..      30      54 ..      30      56 .. 0.83
   2 ?   -3.4   0.1       6.1   1.2e+04      11      26 ..      87     100 ..      85     102 .. 0.41

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 9.3e-05
  zinc_ribbon_9  5 ChqCdrfVsvspdedsdv.lCPhCg 28
                   C +C+++V +s++ +    +CP C+
     EPX72077.1 30 CFSCNQHVKLSRNGSMREwTCPLCE 54
                   **********9985555459****7 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 6.1
  zinc_ribbon_9  11 fVsvspdedsdvlCPh 26 
                    fV+ +p+    ++C +
     EPX72077.1  87 FVEKTPT--KSPFCED 100
                    4443332..2234555 PP

>> RNHCP  RNHCP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   1.0   0.00023      0.47       5      38 ..      29      62 ..      25      67 .. 0.90
   2 ?   -2.2   0.1       2.1   4.2e+03       5      20 ..     145     160 ..     142     168 .. 0.61

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00023
       RNHCP  5 tCeeCgkeveklaagsakrnHCpsCLlskHvdee 38
                +C +C+++v+ +++gs +   Cp C + +H d++
  EPX72077.1 29 RCFSCNQHVKLSRNGSMREWTCPLCEAPNHFDDN 62
                7***************88889*********9986 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 2.1
       RNHCP   5 tCeeCgkeveklaags 20 
                 +C +C   v+++ +++
  EPX72077.1 145 VCDNCYGPVHEQLESN 160
                 6888888887654433 PP

>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   1.1    0.0058        11      28      50 ..      32      54 ..      23      56 .. 0.77
   2 ?   -2.6   0.1       2.7   5.4e+03      45      49 ..      97     101 ..      89     104 .. 0.60
   3 ?    5.8   0.1    0.0064        13      11      28 ..     139     156 ..     133     173 .. 0.72

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0058
                TTSSSTHSHHSHHSSTBSSTTTH CS
         PHD 28 kClkppleseekpegewlCekCk 50
                +C +  + s++ +++ew+C+ C+
  EPX72077.1 32 SCNQHVKLSRNGSMREWTCPLCE 54
                566666666666677*******8 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 2.7
                 SSTTT CS
         PHD  45 lCekC 49 
                 +Ce C
  EPX72077.1  97 FCEDC 101
                 45555 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.0064
                 TTSCEEEETTTSCEEETT CS
         PHD  11 eeeelvqCdgCkrwfHqk 28 
                 ee++ ++Cd+C   +H +
  EPX72077.1 139 EEKFPIVCDNCYGPVHEQ 156
                 67888***********86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (572 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1078  (0.0601261); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.76u 0.36s 00:00:01.12 Elapsed: 00:00:00.57
# Mc/sec: 3006.59
//
Query:       EPX72078.1  [L=227]
Description: rab GTPase binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-09   37.7  13.3    2.4e-09   37.2  13.3    1.3  1  Yip1      Yip1 domain
  ------ inclusion threshold ------
       0.61    9.1   6.1       0.79    8.8   6.1    1.1  1  AC_N      Adenylyl cyclase N-terminal extracellular and trans


Domain annotation for each model (and alignments):
>> Yip1  Yip1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.2  13.3   2.6e-13   2.4e-09       3     163 ..      66     210 ..      64     225 .. 0.86

  Alignments for each domain:
  == domain 1  score: 37.2 bits;  conditional E-value: 2.6e-13
        Yip1   3 ldPrevfrrlkkepp........ilrapdlallllalltlllgllaslnlgqtlasgeevqgltlssllgaiiggylglllgllllalllhliakllgg 93 
                 ++++++ +++ ++++        i+++ d+a+++l++l +  +l +                  + s++g+i+g++l   lg l l l+l l++     
  EPX72078.1  66 INFGHIKQKTTHVLNpfkhvdvhIMDDTDMAGPVLFCLLFSTFLSLH-----------------GRSHFGYIYGIAL---LGSLSLHLVLRLMSA---R 141
                 667777777777777888888899**************999999999.................9********9999...999999999999333...7 PP

        Yip1  94 kgsfkqtlsvvgyallPlilgaliaillllllgtllllvgllaliWslvllylglkaahnlskkkallaa 163
                 +  +++t+sv+gy+llPl++ a++  l+++ ++ l++++ + a+iWs+++ + ++ a  ++++ + l+a 
  EPX72078.1 142 NLFYTRTVSVLGYSLLPLVVVAFFKNLVSFNGI-LGYASAAFASIWSTYAASAMFVAILQVNNMRFLVAY 210
                 777***********************9998777.6**********************9999988877664 PP

>> AC_N  Adenylyl cyclase N-terminal extracellular and transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   6.1   8.8e-05      0.79     203     301 ..      95     200 ..      90     224 .. 0.72

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 8.8e-05
        AC_N 203 mavlvlvcvvmlafhaargplevsyvvvlsl..aillilvlavlcnrnafhqdhmwlacyavi.lvvlav..qvvgv..llvqprsasegiwwtvffiy 294
                 ma  vl c+++ +f + +g+ +  y+  ++l  ++ l lvl ++  rn f+   + +  y+++ lvv+a   ++v    +l +  +a   iw t     
  EPX72078.1  95 MAGPVLFCLLFSTFLSLHGRSHFGYIYGIALlgSLSLHLVLRLMSARNLFYTRTVSVLGYSLLpLVVVAFfkNLVSFngILGYASAAFASIWSTYAASA 193
                 78889**************9999999776653379999***********************98334443221233222246667777777777755444 PP

        AC_N 295 siytllp 301
                 +  ++l 
  EPX72078.1 194 MFVAILQ 200
                 4444554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       581  (0.0324056); expected 358.6 (0.02)
Passed bias filter:                      227  (0.0126611); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.38s 00:00:00.96 Elapsed: 00:00:00.58
# Mc/sec: 1185.36
//
Query:       EPX72079.1  [L=325]
Description: hypothetical protein SOCG_04011 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.4e-58  195.9   0.0    8.8e-58  195.6   0.0    1.1  1  Carb_kinase  Carbohydrate kinase
    0.00051   19.5   0.0     0.0017   17.8   0.0    1.8  1  HK           Hydroxyethylthiazole kinase family


Domain annotation for each model (and alignments):
>> Carb_kinase  Carbohydrate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  195.6   0.0   9.8e-62   8.8e-58       1     231 [.      32     293 ..      32     305 .. 0.88

  Alignments for each domain:
  == domain 1  score: 195.6 bits;  conditional E-value: 9.8e-62
                  EEEEE-BTTCHHHHHHHHHHHHCTT-SEEEEEESSTTTCCCCTTTTTCEECCTT...........HTTTS....--SSS-SEEEE-TT-SSSHCHHH. CS
  Carb_kinase   1 vlvigGsedytGAallaalaalrlgaglvsvateseaiavlksylpevivhpll...........edeqa.kileklerldavviGpGLgrdekikk. 85 
                  v++ gG+++ytGA++ +  + + +g +  ++++e++a++v+ksy+p++ivhp+l            d  +  + +  erl+a+viGpGLgrde++ + 
   EPX72079.1  32 VGIFGGCQHYTGAPYYSSMSSMLFGTDQSHIFCEKNAANVIKSYSPDLIVHPFLrekenknpgdsIDGIMeLVKPMMERLHAIVIGPGLGRDEWMLEt 129
                  6899*******************************************************999988444555778999*****************9988 PP

                  ...HCHHHCCCCS-EEEEGGGGGSGGGG...TTTTSSEEEE--HHHHHHHCTTTCHHCCSHHHHHHHHHHHHTTEEEEESTTSEEEECTTEEEEE--- CS
  Carb_kinase  86 ...lleevlekdeplviDAdgLnllaqknelserkaeviLTPhkkEfkrLlkaivkkeddrlelarelaqklnavvllkgekdvivspegevlinstg 180
                     ++++++ek+ p+viDAdgL+l++q  el    ++v+LTP+++EfkrL++ ++  +++  +++++la+kln  ++ kg++d+i + +g ++++s  
   EPX72079.1 130 vakVIQYAREKEMPMVIDADGLFLVQQRPELVSGYHNVVLTPNVVEFKRLCDKVG-VQSEGPDACQNLAKKLNLLIVQKGKEDIISD-GGTIYACSVP 225
                  8889***************************************************.9**************************9877.********** PP

                  -GGG-STTHHHHHHHHHHHHHHCTS.................SHHHHHHHHHHHHHHHHHHHCCCT-T CS
  Carb_kinase 181 ssalakGGsGDvLaGligalLaqne.................asyeaaiaaawlhgaasdeaaekkgv 231
                  ++++++GG+GD+L+G++  +La+ +                   + aa  a+   + +s+  +++ g+
   EPX72079.1 226 GGLKRCGGQGDILTGILVTFLAWRKaylnkqwdiegdmdakeCLFLAAYGACATTRWCSRVSFKECGR 293
                  ************************96666666666655554444455555555555555555555555 PP

>> HK  Hydroxyethylthiazole kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   1.9e-07    0.0017     111     205 ..     169     253 ..     100     279 .. 0.67

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 1.9e-07
                 EEEEHHHHHHHHTSSCCSCSSSSSS-SHHHHHHHHHHHHHHTSEEEEESSSEEEEESSEEEE..EE-S-GGGGGSTTHHHHHHHHHHHHHTTBSSHH CS
          HK 111 ikGNasEilslaglelkvkGvDskeaataavaavqkvAqklrvvvvvtGevDvvsdgkkvyk..lknGtellgkitasGCllgsvvaaflavkkdkl 205
                 +  N  E   l  +     Gv s+        a q++A+kl++++v  G+ D++sdg ++y   + +G   l +  + G +l+ ++ +fla  k+ l
  EPX72079.1 169 LTPNVVEFKRLCDK----VGVQSEGP-----DACQNLAKKLNLLIVQKGKEDIISDGGTIYAcsVPGG---LKRCGGQGDILTGILVTFLAWRKAYL 253
                 55555555544432....34444332.....4689***********************9886114555...56777777777777777777766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (325 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       491  (0.0273858); expected 358.6 (0.02)
Passed bias filter:                      451  (0.0251548); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.34s 00:00:00.94 Elapsed: 00:00:00.50
# Mc/sec: 1963.62
//
Query:       EPX72080.1  [L=302]
Description: SAGA complex subunit Spt3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.5e-37  127.5   2.2    1.8e-37  127.2   0.8    1.8  2  TFIID-18kDa  Transcription initiation factor IID, 18kD subuni
  ------ inclusion threshold ------
      0.075   13.2   0.0       0.33   11.1   0.0    2.1  1  BLUF         Sensors of blue-light using FAD
       0.09   12.0   0.1       0.21   10.8   0.2    1.5  2  NUP          Purine nucleoside permease (NUP)
       0.23   12.0   5.0        8.1    7.0   0.3    2.4  2  DFRP_C       DRG Family Regulatory Proteins, Tma46


Domain annotation for each model (and alignments):
>> TFIID-18kDa  Transcription initiation factor IID, 18kD subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.2   0.8     4e-41   1.8e-37       2      92 ..       3      92 ..       2      93 .. 0.96
   2 ?   -3.2   0.0       1.9   8.6e+03      19      48 ..     200     229 ..     198     234 .. 0.72

  Alignments for each domain:
  == domain 1  score: 127.2 bits;  conditional E-value: 4e-41
                 --CCCCHHHHHCTTS-SS--HHHHHHHHHHHHHHHHHHHHHHHC-XXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  TFIID-18kDa  2 lfrkelqsmlyalGdvkePlqetvqlledlvrgyliellqqaakvaklrgsrkitlEDllfliRkDkkKlnRlkellslkellkkakKqfd 92
                 ++r+e+q+m+++lG+v++Pl et+ql+e+l+rg+++e+l+qa+++a +rgs++i++EDl+fliR+D++K+nRlk++ls+ke++ k++K++d
   EPX72080.1  3 KYRVEIQQMMFILGEVQDPLPETIQLVEELIRGQVMEMLIQANELAIRRGSKSINVEDLFFLIRHDRAKVNRLKTYLSWKEVR-KKAKEQD 92
                 8**********************************************************************************.7777777 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.9
                  S--HHHHHHHHHHHHHHHHHHHHHHHC-XX CS
  TFIID-18kDa  19 ePlqetvqlledlvrgyliellqqaakvak 48 
                  +P ++ v++l  l  + +  l+++a  v +
   EPX72080.1 200 RPDNDIVDILGFLTFEIVATLTEEALAVKE 229
                  577777888888888888888888877654 PP

>> BLUF  Sensors of blue-light using FAD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   7.4e-05      0.33      20      76 ..     193     246 ..     177     258 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 7.4e-05
                 HHHHHHHHHHHHHHTEEEEEEEETTEEEEEEEEEHHHHHHHHHHHHT-TTEEEEEEE CS
        BLUF  20 eeileesrenNkelgitGvLlydegvflQvLEGeeeaveelyerIkkDpRhkdvevl 76 
                  ++l+e+r  N   +i G+L +    ++  L  e+ av+e +++I++++Rh + +v 
  EPX72080.1 193 MSVLTETRPDNDIVDILGFLTF---EIVATLTEEALAVKERMDQIQDNTRHGSYHVP 246
                 578999999***********98...47888999******************988765 PP

>> NUP  Purine nucleoside permease (NUP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.2   4.7e-05      0.21     133     182 ..     123     173 ..      88     185 .. 0.74
   2 ?   -2.4   0.0      0.47   2.1e+03     129     169 ..     197     238 ..     190     244 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 4.7e-05
         NUP 133 pneypkeiygtevfelneaLrdwAvelakkakLkdseeaaayrakY.eyaa 182
                 +n   + i +te fe ++++ ++A+++ +++kL+d+++ + +r++Y + ++
  EPX72080.1 123 KNMFSEPIPETEEFEGDDDMMEMAYATRERLKLADERTKKMTREEYvHWSE 173
                 33334556669***********************************74333 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.47
         NUP 129 gtkepneypkeiygtevfelneaLrdwAvelakk.akLkdse 169
                  +++p++   +i g  +fe+ ++L++ A+++ ++  +++d++
  EPX72080.1 197 TETRPDNDIVDILGFLTFEIVATLTEEALAVKERmDQIQDNT 238
                 556677777778888899999999999999987734566665 PP

>> DFRP_C  DRG Family Regulatory Proteins, Tma46
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.7    0.0025        11      24      48 ..      75      99 ..      59     115 .. 0.83
   2 ?    7.0   0.3    0.0018       8.1      10      36 ..     150     177 ..     140     192 .. 0.85

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0025
      DFRP_C 24 letFakWKkkrlekkeaeeekeekk 48
                l+t+  WK+ r++ ke++++++++k
  EPX72080.1 75 LKTYLSWKEVRKKAKEQDANAADTK 99
                6899********9999999986554 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0018
      DFRP_C  10 teRakLdk.klTpvtletFakWKkkrle 36 
                 +eR kL +  + ++t e++ +W + r++
  EPX72080.1 150 RERLKLADeRTKKMTREEYVHWSECRQA 177
                 6999**8867789*********988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       924  (0.0515366); expected 358.6 (0.02)
Passed bias filter:                      485  (0.0270511); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.64u 0.35s 00:00:00.99 Elapsed: 00:00:00.55
# Mc/sec: 1656.03
//
Query:       EPX72081.1  [L=592]
Description: siderophore-iron transporter Str2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.1e-13   49.4  46.1    5.6e-12   45.3  44.9    2.9  1  MFS_1     Major Facilitator Superfamily
  ------ inclusion threshold ------
      0.042   13.6   0.4       0.24   11.1   0.1    2.5  2  Lectin_N  Hepatic lectin, N-terminal domain
        6.9    6.8  10.9        3.1    7.9   5.7    2.7  2  SYS1      Integral membrane protein S linking to the trans Go


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.3  44.9   9.3e-16   5.6e-12      22     352 ..      96     496 ..      67     497 .. 0.81

  Alignments for each domain:
  == domain 1  score: 45.3 bits;  conditional E-value: 9.3e-16
       MFS_1  22 alaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfa.sslwlllvlrvlqGlgagalfpagaaliadwfpkeer 119
                 + ++++  ++s + ++  +  ++ av   p+   +d fGr   + l+l + ++g ++ll +  ++ ++ ++ ++   g+ ++  +++ +iad ++  +r
  EPX72081.1  96 YATSNFS-AHSNLATINLVSNILLAVVRAPMVKAGDVFGRTESITLALCMAVFG-YVLLACsRNIGTFTLAYIIYICGQTGIGILSQLIIADTSSLLNR 192
                 3344444.44445555555666779999999999*****999999999999999.555523355669******************************** PP

       MFS_1 120 graigllsagfslGailgpllgglla..sslgWravfyilaivsllafv.lfllllpeepperkrkspkeee........................... 188
                 g   ++    + l + +gp+l+ ++    + gWr  + i ai++ ++ + l l l++  +++++    +e                             
  EPX72081.1 193 GILSAIPEQPYLLTVWMGPALAQAFHpeRAMGWRIGYGIWAIILPVVSLpLLLSLYFNQQKAKAAGLYREHHqffnnstflnfwqeldgvgillfisgf 291
                 **************************856678***************998555555555555555544444469999999999999999******9999 PP

       MFS_1 189 ........................................kgtgpaplvp..awkallkdpvlwillialllfffgfsglltllplylqevlglsglll 245
                                                         ++ +     p  a+++l+ + vl ++++++l+f + +s+++ +l++ylq +++ls    
  EPX72081.1 292 glfllpfshsstvvspesnlltcltmglgllllvalcvydSKYAVY---PifALRSLKDRTVLGACFLIFLYF-MTYSIFSNFLTSYLQVTHDLS-IDA 385
                 9999999999999888889999999888888888888444444444...35559*******998788888887.6********************.778 PP

       MFS_1 246 aglllallalvgailallagrlsdrlgr.rrrlllallllllaalglallavt...ssavllllvlvliGfglgfvfpsllalasdlappeeagtasgl 340
                 +gl++ ++ + +  +a+++g+l++++ r +  l ++++l ll+ +g++l+++    s+   ++++l+++G+g+g+ + s++++++++ +  + g+ + l
  EPX72081.1 386 SGLIVNVFIFSMTTSAICSGFLMKKFARfKVLLKFSIPLYLLGIIGYILFGFDnenSNIRRIVFMLFVAGVGGGLLTLSAQVAVQSVSSHTKVGQNLTL 484
                 888899999999999**********999899**********************874444444448888******************************* PP

       MFS_1 341 fntagslggalg 352
                 + t++s+gga+g
  EPX72081.1 485 YLTFSSVGGAFG 496
                 **********98 PP

>> Lectin_N  Hepatic lectin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   4.1e-05      0.24      26      49 ..     310     333 ..     297     338 .. 0.85
   2 ?   -2.3   0.0      0.56   3.4e+03      27      46 ..     558     577 ..     539     579 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 4.1e-05
    Lectin_N  26 lrllllslglsllLLVvvcVigsq 49 
                 + l+ l++gl llLLV++cV  s+
  EPX72081.1 310 NLLTCLTMGLGLLLLVALCVYDSK 333
                 4578899*************8876 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.56
    Lectin_N  27 rllllslglsllLLVvvcVi 46 
                  l  +sl +s+l+++ + +i
  EPX72081.1 558 DLFRVSLIFSILMIIGLYII 577
                 45567888899988877665 PP

>> SYS1  Integral membrane protein S linking to the trans Golgi network
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   5.7   0.00053       3.1      25     105 ..     354     435 ..     348     444 .. 0.88
   2 ?    0.3   0.1      0.12   7.2e+02      27      74 ..     447     494 ..     443     499 .. 0.87

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.00053
        SYS1  25 iaavlilltallagkelsldllfswesldvddtsgrllilvwvln.slvvvlallllveRsKlalDFalTihvihlvvvsly 105
                 + +++++++++ + +++ +++l   + l++d +   + ++++ ++ s +++ +l+   +R K+ l F++ ++++ ++  +l+
  EPX72081.1 354 CFLIFLYFMTYSIFSNFLTSYLQVTHDLSIDASGLIVNVFIFSMTtSAICSGFLMKKFARFKVLLKFSIPLYLLGIIGYILF 435
                 667778899999999999999999999**999998899999988769**************************999988776 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.12
        SYS1  27 avlilltallagkelsldllfswesldvddtsgrllilvwvlnslvvv 74 
                 +v++l++a + g  l+l+    ++s++ ++++g+ l+l   ++s+ ++
  EPX72081.1 447 IVFMLFVAGVGGGLLTLSAQVAVQSVSSHTKVGQNLTLYLTFSSVGGA 494
                 567889999999999999999***************999999998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (592 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       783  (0.0436723); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.71u 0.34s 00:00:01.05 Elapsed: 00:00:00.51
# Mc/sec: 3462.54
//
Query:       EPX72082.1  [L=481]
Description: Jmj4 protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.5e-45  154.7   0.0    6.6e-45  153.8   0.0    1.6  1  Cupin_8   Cupin-like domain
    0.00049   19.7   0.0     0.0017   17.9   0.0    2.0  3  Cupin_4   Cupin superfamily protein
  ------ inclusion threshold ------
       0.14   12.6   0.0        2.3    8.7   0.0    2.4  2  JmjC      JmjC domain, hydroxylase


Domain annotation for each model (and alignments):
>> Cupin_8  Cupin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.8   0.0   1.1e-48   6.6e-45       1     252 [.      30     424 ..      30     426 .. 0.76

  Alignments for each domain:
  == domain 1  score: 153.8 bits;  conditional E-value: 1.1e-48
     Cupin_8   1 peeffreyvakskPviikgalk..dwpalqkwtddeylleylkekaedvkvsvektpdgeadsfkeneelkfvkpeeeemtfkdfldelearrdtrsep 97 
                 pe+f+r+yvak+ Pv+ik  l   dw+    w++++ylle++++++ + +       d  +  f+++        +++emt+++fl++l+a++ + + +
  EPX72082.1  30 PEQFYRDYVAKRLPVVIKSPLPetDWKG-YLWKNEDYLLEKIGQSICKIEPM-----DPSTGTFGQG-------MSRNEMTIAEFLKRLKAGE-RLYLT 114
                 68999**************998335775.67999666666666666554443.....2345567765.......6789*************96.44444 PP

     Cupin_8  98 yaylqnanlasefpelk..............ed..sdlpfateafgkk.peavnlWlGnsa..svsslHkDhyeNlycvvrGrKkftLfpPsdapflye 177
                 + y    ++++ +   +              +   sd+ + + ++g++ p+++n+W+G+s+  ++s+lH+D ++N+y+vv+G K+f++++P+ a++l+ 
  EPX72082.1 115 TQYD---SSDDILDGDDevsllvkslcpaptNSllSDFSLTPALMGNLvPQQCNIWIGRSEngTSSGLHHDFHDNIYTVVKGHKRFVILSPDSAVHLQL 210
                 4444...33333333222223334444444332789999999*****99*********887669*********************************55 PP

     Cupin_8 178 a................slsptedgtv........................................................................ 188
                 a                +                                                                                 
  EPX72082.1 211 AgkiskihpnglvsyegE--------Drsqrsdglteldaaiahtqflenkiaglkeaqtsediiqqleadyeaemdnvlqmqlggeaddwdelqegda 301
                 544444444444433322........02233456668888888888999999999999999999999999999999999999999999*********** PP

     Cupin_8 189 .........................................................vssvdve.....epdlekfprlkdakkalevtlnaGevLylP 225
                                                                          +     e     e+++++  +l+++ ++l+v+l++G++LylP
  EPX72082.1 302 dslldestneieddsssvngedqsdnkaevspsnnenpslpdhftkitvpglhkylgF-----EdakdvEMSEDERTSLSKT-RPLVVDLEPGDMLYLP 394
                 **************99999999999999988888888888888666666665444443.....1444446677777888888.9*************** PP

     Cupin_8 226 alWfHeVksla...eeplhlavnywydmsf 252
                 a WfHeV+s+    e+++h+a+nyw+++++
  EPX72082.1 395 ASWFHEVTSSCqegESNIHIAFNYWFHPPD 424
                 ********999888788**********986 PP

>> Cupin_4  Cupin superfamily protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0      0.66     4e+03       1      21 [.      30      51 ..      30      58 .. 0.81
   2 ?   -3.9   0.0       1.2   7.1e+03     124     147 ..     174     196 ..     138     204 .. 0.70
   3 !   17.9   0.0   2.8e-07    0.0017     179     198 ..     384     403 ..     360     463 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 0.66
                HHHHHHHTTTTS.-EEE--S-C CS
     Cupin_4  1 veeFlreyWqkk.pllirralp 21
                +e+F+r+y  k+ p++i+  lp
  EPX72082.1 30 PEQFYRDYVAKRlPVVIKSPLP 51
                689*****98876899988777 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 1.2
                 TBBSS-SEE-SSEEEEEEEEC-EE CS
     Cupin_4 124 gsqgvgpHyDdyDVfllQleGrkr 147
                 g ++ g H D +D     ++G+kr
  EPX72082.1 174 G-TSSGLHHDFHDNIYTVVKGHKR 196
                 2.6778899999977777888887 PP

  == domain 3  score: 17.9 bits;  conditional E-value: 2.8e-07
                 EE-TT-EEEE-TT-EEEEEB CS
     Cupin_4 179 vLepGDlLYlPrgviHqgva 198
                  LepGD+LYlP  + H+  +
  EPX72082.1 384 DLEPGDMLYLPASWFHEVTS 403
                 59**************9754 PP

>> JmjC  JmjC domain, hydroxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0     0.071   4.3e+02       5      90 ..     171     266 ..     167     268 .. 0.69
   2 ?    8.7   0.0   0.00038       2.3      73     103 ..     375     403 ..     342     418 .. 0.78

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.071
                 E-TT-EEEEE--GGG-EEEEEEEEES-EEEEEE-GGGHHHHH.....HHHHHH...........HHCCSTTGCCTTTCEE-HHHHHHTT---EEEEE-T CS
        JmjC   5 gmpksttpwhiedqglySinylhfgapkvWyiipeekkekle.....kvlskk...........nskeqpdllrhkstlispkqlekegipvyrfvqkp 87 
                 + ++++ + h + ++     y+ ++++k+  i  ++ + +l+     +   k            ++ + +d l+++   i  +q+ +++i   +  q +
  EPX72082.1 171 SENGTSSGLHHDFHDNI---YTVVKGHKRFVILSPDSAVHLQlagkiS---KIhpnglvsyegeDRSQRSDGLTELDAAIAHTQFLENKIAGLKEAQTS 263
                 67788888888888888...8999999999999999888888775332...222557777767443444444888888888888777778777777776 PP

                 T-E CS
        JmjC  88 gef 90 
                  ++
  EPX72082.1 264 EDI 266
                 665 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00038
                 HHHTT---EEEEE-TT-EEEE-TT-EEEEEE CS
        JmjC  73 lekegipvyrfvqkpgefVfvfpgayHsvfn 103
                 l  ++ ++  +  +pg++++ ++ ++H v +
  EPX72082.1 375 L--SKTRPLVVDLEPGDMLYLPASWFHEVTS 403
                 4..4558899999**************9965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (481 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       708  (0.0394891); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.71u 0.37s 00:00:01.08 Elapsed: 00:00:00.56
# Mc/sec: 2584.94
//
Query:       EPX72083.1  [L=195]
Description: 60S ribosomal protein L6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      2e-35  121.7   0.0    2.7e-35  121.2   0.0    1.2  1  Ribosomal_L6e  Ribosomal protein L6e
  ------ inclusion threshold ------
       0.06   13.3   0.1       0.23   11.5   0.1    2.0  2  KOW            KOW motif


Domain annotation for each model (and alignments):
>> Ribosomal_L6e  Ribosomal protein L6e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.2   0.0     3e-39   2.7e-35       1     111 []      88     195 .]      88     195 .] 0.96

  Alignments for each domain:
  == domain 1  score: 121.2 bits;  conditional E-value: 3e-39
  Ribosomal_L6e   1 lNgvPLrRvnqryVIatst.kvdlsgvdekipeklndeyFkkekkkkkkkkkeeelfeekkekkelseerkadqkavDkallaaikkekllkkYLk 95 
                    +NgvPLrRvn+ryVIats  k+d+sg+   +++ +n++yF+k k++    kk+e++f+e++ kk+l++er+adqkavD++ll+aik+ +++k+YL+
     EPX72083.1  88 VNGVPLRRVNHRYVIATSApKLDVSGI--PVEK-FNQAYFAKPKRSGPL-KKDEAFFAENAPKKALPAERVADQKAVDAKLLPAIKAIPNMKEYLA 179
                    7**************************..6666.999******888776.999******************************************* PP

  Ribosomal_L6e  96 skFsLrkgdyphelkF 111
                    ++F+L++gd+ph +kF
     EPX72083.1 180 ASFALSNGDRPHLMKF 195
                    ***************9 PP

>> KOW  KOW motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   2.5e-05      0.23       1      26 [.      54      79 ..      54      84 .. 0.86
   2 ?   -0.5   0.0      0.15   1.4e+03       7      13 ..      81      87 ..      79      87 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 2.5e-05
                TTSEEEESSSTTTTCEEEEEEEETTT CS
         KOW  1 pGdhVkVvsGphkGktGkVvkvdqhk 26
                pG +++ ++G+++Gk  +V++  +++
  EPX72083.1 54 PGTVCILLAGRFRGKRVVVLSQLEDT 79
                8999***************9988777 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.15
                ESSSTTT CS
         KOW  7 VvsGphk 13
                Vv Gp+k
  EPX72083.1 81 VVTGPFK 87
                9*****8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       267  (0.0148921); expected 358.6 (0.02)
Passed bias filter:                      244  (0.0136092); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.33s 00:00:00.86 Elapsed: 00:00:00.52
# Mc/sec: 1129.42
//
Query:       EPX72084.1  [L=377]
Description: AP endonuclease Apn1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.7e-28   98.9   0.1    4.2e-28   98.2   0.1    1.3  1  AP_endonuc_2  Xylose isomerase-like TIM barrel


Domain annotation for each model (and alignments):
>> AP_endonuc_2  Xylose isomerase-like TIM barrel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.2   0.1   2.3e-32   4.2e-28      10     208 ..      54     264 ..      51     266 .. 0.91

  Alignments for each domain:
  == domain 1  score: 98.2 bits;  conditional E-value: 2.3e-32
                   SEEEEECCTCSHHHHC..HHHHHHHHHHHHHHTTSEEEEEEECCCHSTCTHCHTTCS.HHHHHHHHHHHHHHHHHHTBSEEEEEBCCGBCTTTSGHH CS
  AP_endonuc_2  10 dgvElfgrdlvpvsel..sdeelrelrkaldelglriaslslftrfgypdederear.reesvdalkraielaaaLGapllvlhpGtagagpkgsee 103
                   +++ +f +++++++++   +e ++++r++++e+ +    + l  +++  +    ++  re++ d++ + ++++++LG+ + ++hpG   + ++ ++e
    EPX72084.1  54 TSCAFFVKSQRKWASAdmPEEIAEKFRELAKEYQFDAKKHVLVHGSYLINMANADKQkREQAYDCFLDDLKRCERLGVGNYNFHPG---STASCTKE 147
                   6788999999999999999999**************55555555555555545555599***************************...******** PP

                   HHHHHHHHHHHHHHHHHHHHTSEEEEE--TTTTSSSTC..HHHHHHHHHHTTTT.EEEEEEHHHHHHH......TTTHHHHHHHHHGG.....EEEE CS
  AP_endonuc_2 104 eawerlaeslneladyaekegvklalEtlagsgvelgd..eelarlldavdspn.vgvclDtgHllia......eedvddalraladr.....ikhv 186
                   e +++lae +n++ +   +++v ++ E++ag+g+ lg+  +++a+l  ++++    +vclDt+H+++a      +e ++++++ +++      i+  
    EPX72084.1 148 EGINNLAECINRAHEA--TNDVIIVTENMAGQGNCLGGtfSDFAALKAKIKNLDrWRVCLDTCHSFAAgydlrtKESYEKVIEDFDKTvgvqyIGGW 242
                   ****************..89*************99999**999999999999888****************************************** PP

                   EE.EESSTTTTSSTTEESTTSS CS
  AP_endonuc_2 187 HikDakgdlgagrdrhvpigeG 208
                   H++D+k +lg++rd h++ig G
    EPX72084.1 243 HLNDSKAPLGSNRDLHENIGLG 264
                   ********************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (377 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1080  (0.0602376); expected 358.6 (0.02)
Passed bias filter:                      533  (0.0297284); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.23s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 2707.48
//
Query:       EPX72085.1  [L=938]
Description: jmjc domain chromatin associated protein Epe1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-08   34.2   0.2    4.1e-07   30.4   0.2    2.9  2  JmjC      JmjC domain, hydroxylase
    6.8e-06   26.0   0.1    6.8e-06   26.0   0.1    2.5  2  Cupin_8   Cupin-like domain
    1.2e-05   25.8   6.0    1.8e-05   25.2   0.2    3.2  3  JHD       Jumonji helical domain


Domain annotation for each model (and alignments):
>> JmjC  JmjC domain, hydroxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   0.2   6.8e-11   4.1e-07       2     114 .]     281     381 ..     280     381 .. 0.80
   2 ?   -3.3   0.0         2   1.2e+04       9      31 ..     557     579 ..     554     606 .. 0.81

  Alignments for each domain:
  == domain 1  score: 30.4 bits;  conditional E-value: 6.8e-11
                 EEEE-TT-EEEEE--GGG-EEEEEEEEES-EEEEEE-GGGHHHHH.HHHHHHHHCCSTTGCCTTTCEE-HHHHHHTT---EEEEE-TT-EEEE-TT-EE CS
        JmjC   2 lylgmpksttpwhiedqglySinylhfgapkvWyiipeekkekle.kvlskknskeqpdllrhkstlispkqlekegipvyrfvqkpgefVfvfpgayH 99 
                 + ++ ++s+ ++hie  g++ + y+++++ k+ y+ip+++++      + + n          k   + p++      ++yr++ ++ e++++++g+++
  EPX72085.1 281 CQMSAENSYIDFHIEFGGSS-AYYNILDGYKIFYLIPPSQEHWNAyTSWLTAN--------ESKREHFLPDMV----DKCYRVEVRAKETIVIPSGWIY 366
                 678999*********99998.9***************9766543334444442........234444444444....24799***************** PP

                 EEEESSSEEEEEEEE CS
        JmjC 100 svfnlgfniaeavnf 114
                 +v +  ++ia++ nf
  EPX72085.1 367 AVETPCDTIAISGNF 381
                 **************9 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 2
                 -EEEEE--GGG-EEEEEEEEES- CS
        JmjC   9 sttpwhiedqglySinylhfgap 31 
                 ++t+ ++ + +l+S+++ h++++
  EPX72085.1 557 TITCHRAKKGRLFSAVVVHTRRS 579
                 78899999999999999998765 PP

>> Cupin_8  Cupin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.1   1.1e-09   6.8e-06      73     245 ..     207     378 ..     175     386 .. 0.78
   2 ?   -3.2   3.8      0.89   5.3e+03      62      97 ..     806     858 ..     746     919 .. 0.49

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 1.1e-09
     Cupin_8  73 peeeemtfkdfldelearrdtrsepyayl....qnanlasefpelk..ed...sdlpfateaf...gkkpeavnlWlGnsasvsslHkDh..yeNlycv 157
                 + +++mt+k+ l++++++ ++rs+ y +l     +++la ++++ +  +d    ++ ++++af    + +  +   ++ ++s + +H         y +
  EPX72085.1 207 QLSNKMTMKQWLQYMKQKPSERSRIYDVLsfevSSTKLALYVRKPDivRDldlINIVWPPSAFasgDCPHVDTYCQMSAENSYIDFHIEFggSSAYYNI 305
                 45789************9988886655556666677777766554444556779999***999543355667777799*9*********9999****** PP

     Cupin_8 158 vrGrKkftLfpPsdapflyeaslsptedgtvvssvdveepdlekf.prlkdakkalevtlnaGevLylPalWfHeVkslaeeplhlavn 245
                 + G K f L+pPs+ +               +s++  +e + e+f p + d+  +++v+++a e++ +P++W + V++   ++ ++a+ 
  EPX72085.1 306 LDGYKIFYLIPPSQEHWNA-----------YTSWLTANESKREHFlPDMVDK--CYRVEVRAKETIVIPSGWIYAVETP--CD-TIAIS 378
                 ************9876432...........3567877666654442555555..9**********************66..76.66665 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 0.89
     Cupin_8  62 f....................keneelkfvkpeeeemtfkdfldelearrdtrsep 97 
                                      k   e+++++++ e++t ++ ++  ++r++tr+++
  EPX72085.1 806 NddssfvedcfdiadaisspsK---ENRSKRKSDEQNTSRKKSQLKSTRKSTRTKS 858
                 0444444444455554454321...2222222222222222222222222222222 PP

>> JHD  Jumonji helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.2   3.1e-09   1.8e-05       1      38 [.     385     422 ..     385     430 .. 0.91
   2 ?   -1.6   0.0      0.64   3.8e+03      32      89 ..     501     558 ..     498     560 .. 0.72
   3 ?    0.5   1.5      0.15   9.1e+02      46      95 ..     837     885 ..     825     891 .. 0.74

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 3.1e-09
         JHD   1 LniemQlriyeiEkklkteekfkfPsfetihWfvakrl 38 
                 L i+ Q+ i e+E +l +e  f+fP fe i+W+ a + 
  EPX72085.1 385 LHIQSQIYINELEVNLGIEREFQFPCFESIMWYTAVHF 422
                 6788999999************************9885 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.64
         JHD  32 Wfvakrlleklkelneegkraaeylvkgakalltalkewtkkeavaekeeeipetikp 89 
                 W +   lle++      + ++  +  +g  + ++ l + ++ +  ++++++ip++++ 
  EPX72085.1 501 WRMVPPLLEEICVDFVRKFNTWLTYHHGRSIYMPFLYTAQETNVGRKERKKIPDKVTI 558
                 5566666666665555555555666678888888999999999999999****99875 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.15
         JHD  46 neegkraaeylvkgakalltalkewtkkeavaekeeeipetikpskLikd 95 
                 +++++r +++l ++ k   t+ ++++ +++ ++ + +i ++++++kL+k+
  EPX72085.1 837 EQNTSRKKSQLKSTRKSTRTKSERFEMNDS-SNLQTAINSHFHSTKLVKE 885
                 456667777777777777777766666665.678999***********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (938 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1427  (0.0795917); expected 358.6 (0.02)
Passed bias filter:                      452  (0.0252106); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.74u 0.26s 00:00:01.00 Elapsed: 00:00:00.42
# Mc/sec: 6685.99
//
Query:       EPX72086.1  [L=507]
Description: hypothetical protein SOCG_04019 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        8.7    4.9   6.1         13    4.2   6.1    1.2  1  Strabismus  Strabismus protein


Domain annotation for each model (and alignments):
>> Strabismus  Strabismus protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   6.1   0.00075        13       4      75 ..      23      91 ..      11     103 .. 0.70

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.00075
  Strabismus  4 rerhrssssrstrsskseksvtvkapgeesrdgqevieveelpqDdnWgenttavtGtseqsisaedvskls 75
                +e+ r++s++ t  ++++++ +v+ +++e+ +g++  +   ++ D ++ e+t a+    e+s s  dvs  +
  EPX72086.1 23 QETARNQSNSLT--QTNDEANAVEKKQDEPFEGNDQLKE-VIAMDSQYSEDTSAMLESNERSSSDRDVSLSR 91
                222222222222..2445588899999999998887765.459************************98655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (507 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1423  (0.0793686); expected 358.6 (0.02)
Passed bias filter:                      642  (0.0358079); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.68u 0.32s 00:00:01.00 Elapsed: 00:00:00.52
# Mc/sec: 2909.87
//
Query:       EPX72087.1  [L=322]
Description: GTPase activating protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-35  122.0   1.1      2e-35  121.4   0.1    1.9  2  ArfGap    Putative GTPase activating protein for Arf
     0.0083   15.8   0.4      0.012   15.2   0.4    1.3  1  Miff      Mitochondrial and peroxisomal fission factor Mff


Domain annotation for each model (and alignments):
>> ArfGap  Putative GTPase activating protein for Arf
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.4   0.1   2.3e-39     2e-35       2     114 ..       3     112 ..       2     115 .. 0.92
   2 ?   -1.9   0.1      0.39   3.5e+03     104     115 ..     222     233 ..     203     269 .. 0.57

  Alignments for each domain:
  == domain 1  score: 121.4 bits;  conditional E-value: 2.3e-39
                 HHHHHHCCSCCCCB-TTT-SBS--EEETTTTEEE-HHHHHHHCCS.TTT--EEETTTS---HHHHHHHHHTCHHHHHHHHTTTC-TTTSG-TTCGHHHH CS
      ArfGap   2 kalkellkepenkvCaDCgakeptWaslnlgvflCieCsgvHrslgvhiskvrsltldkwedeelellkalgNkkaneileaklpkeekrskssskekr 100
                 + l+++++ pen++C+DC +++p+Was+nlg+f+C+eCsg Hr lgv+ s+vrs+t+d+w+d+++++++++gN++a+++l       e  s++s ++k+
  EPX72087.1   3 ETLEKIARLPENRKCFDCDSPNPQWASCNLGIFICLECSGQHRGLGVEKSFVRSVTMDNWNDRQIKMMEKGGNERARAFLMTDP---EFLSSKSIRDKY 98 
                 57899*************************************************************************998876...333357999*** PP

                 HHHHHHHHTCHTTC CS
      ArfGap 101 eefirakYeekkfa 114
                 ++ i++ Y+ek  a
  EPX72087.1  99 NTDIAEDYREKLLA 112
                 *********99876 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.39
                 HHHHHTCHTTCC CS
      ArfGap 104 irakYeekkfae 115
                 i++ Y++ +fa+
  EPX72087.1 222 INKTYVQSTFAK 233
                 333344333332 PP

>> Miff  Mitochondrial and peroxisomal fission factor Mff
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.4   1.4e-06     0.012     174     232 ..     242     312 ..     194     318 .. 0.68

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.4e-06
        Miff 174 lysargilsliqsttrrayqqvlevldenr.lrggsaskssslskhd............slreelstldssl 232
                 + +++ +  ++qst r++yqqv  ++den  ++ g +++  ++++h+            +  eel++++s++
  EPX72087.1 242 VDAVKTFSTSVQSTARQSYQQVRSIIDENInATDGPSQRP-ASEHHTdpdvtnplihgdDHSEELPSYSSVV 312
                 5556677789*******************95555555555.5555553644444444444444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       776  (0.0432818); expected 358.6 (0.02)
Passed bias filter:                      569  (0.0317363); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2293.96
//
Query:       EPX72088.1  [L=1102]
Description: tel Two Interacting protein 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1102 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       701  (0.0390987); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.81u 0.27s 00:00:01.08 Elapsed: 00:00:00.49
# Mc/sec: 6826.83
//
Query:       EPX72089.1  [L=451]
Description: NADP-specific glutamate dehydrogenase Gdh1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-77  261.0   1.6    1.5e-77  260.6   1.6    1.1  1  ELFV_dehydrog    Glutamate/Leucine/Phenylalanine/Valine dehyd
    4.6e-50  168.8   0.0    8.4e-50  168.0   0.0    1.4  1  ELFV_dehydrog_N  Glu/Leu/Phe/Val dehydrogenase, dimerisation 
  ------ inclusion threshold ------
       0.16   12.5   0.1       0.32   11.5   0.1    1.5  1  NAD_binding_7    Putative NAD(P)-binding


Domain annotation for each model (and alignments):
>> ELFV_dehydrog  Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  260.6   1.6   2.6e-81   1.5e-77       1     241 [.     187     446 ..     187     447 .. 0.95

  Alignments for each domain:
  == domain 1  score: 260.6 bits;  conditional E-value: 2.6e-81
                    T--TTTTTHHHHHHHHHHHHHHHHTTTS..-STTEEEEEE--SHHHHHHHHHHHHCT-EEEEEEESSEEEE..ETTEE...-HHHHHHHHHCSSSS CS
  ELFV_dehydrog   1 GGsldrpeaTglGvvyyveemlkklkld..slegkrvaisGsGnvgsyaallltelgakvvavsDssGviy..dpeGl...dieellelkeerksv 89 
                    GGs++rpeaTg+Gvvyyv +m+++++    s++gkrvaisGsGnv++yaal+++elga v ++sDs+G+++   peGl    i +++elk++r ++
     EPX72089.1 187 GGSNIRPEATGYGVVYYVCHMIQYASKGsdSISGKRVAISGSGNVAQYAALKCMELGAVVKSLSDSKGTLIaaGPEGLtpdIIYKVQELKDKRLAI 282
                    9**********************9776677****************************************96679***88667899999999999* PP

                    TTHSHHSTSTSEEESHHSHHHHS..S-SEEEE-SSTTSB-HHHHTHTHHTT-SEEE-SSSS-B-HHHHHHHHHTT.....-EEE-HHHHTTHHHHH CS
  ELFV_dehydrog  90 keykkssekkaeyieneeellel..kvdilvPcAtqneideenakalikngvklvvEgANlpttqeAkeileeag.....vlvvpdkaaNaGGVtv 178
                    ++ k+   +k++yi+++ +++++  +vdi++PcAtqne+++e+a+alik+g+++v+Eg+N++++ eA e++e+++     ++++p+kaaNaGGV+v
     EPX72089.1 283 ADCKELI-SKHKYIAGA-RPWTHvgEVDIALPCATQNEVSAEEAEALIKAGCRFVAEGSNMGSSAEAVEVFEKSRatgegCWLAPGKAANAGGVAV 376
                    ****655.479*****6.****899************************************************9999999**************** PP

                    HHHHHHHHHCT----HHHHHHHHHHHHHHHHHHHHHHHHHCT-T.......HHHHHHHHHHHHHHHHHHH CS
  ELFV_dehydrog 179 SslEmlqnlarlswteeevdeklkkimkeifkavveeaeeykqe.......lvkganiagfekvaeamka 241
                    S+lEm+qn++  +w++ evd +l +im++if++ +++a++y  +       l +gan agf +va+am+a
     EPX72089.1 377 SGLEMAQNAQFSTWSHAEVDGRLADIMNSIFSQSTDAASKYCDSgknnlpsLFDGANLAGFVRVARAMEA 446
                    ****************************************9999999*********************86 PP

>> ELFV_dehydrog_N  Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  168.0   0.0   1.4e-53   8.4e-50       1     130 []      42     170 ..      42     170 .. 0.99

  Alignments for each domain:
  == domain 1  score: 168.0 bits;  conditional E-value: 1.4e-53
                      -SEEEEEEEEEE-TTSBEEEEEEEEEEEE-TTSSEEEEEEEETT--HHHHHHHHHHHHHHHHHTTSS-EEEEEEEES-GGGS-HHHHHHHHHHH CS
  ELFV_dehydrog_N   1 pervlqvtvpvkrdnGelevikgyraqhssalgPakGGiRfhpsvnldevkaLaalmtyKnalvdlpfGGakggvkidpkklseeeleritrrf 94 
                      pervlq++v++++d+G+++v++gyr+q++salgP+kGG+Rfhpsvnl+ +k+L++++++Knal++lp+GG+kgg+++dpk++s++e++r+ ++f
       EPX72089.1  42 PERVLQFRVTWEDDQGNCRVNTGYRVQFNSALGPYKGGLRFHPSVNLSILKFLGFEQIFKNALTGLPMGGGKGGSDFDPKGKSDAEIRRFSQAF 135
                      89******************************************************************************************** PP

                      HHHHG.GG-BTTTEEEEBBTTB-HHHHHHHHHHHHH CS
  ELFV_dehydrog_N  95 vrelakkfiGpgiDvpApDvgtgaremawladeykk 130
                      +r+l+ ++iGp++DvpA D+g++   ++ +++eyk+
       EPX72089.1 136 MRQLY-RHIGPQTDVPAGDIGVTGFVVNAMFGEYKR 170
                      *****.****************************85 PP

>> NAD_binding_7  Putative NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   5.3e-05      0.32       5      80 ..     218     325 ..     217     337 .. 0.61

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 5.3e-05
  NAD_binding_7   5 lkgkkvlvvGgGevAarkvrklleagakvtvvapev...keele........................elvklaeeelekd............... 58 
                    ++gk+v + G G+vA+  + k +e ga v+ ++                                               d               
     EPX72089.1 218 ISGKRVAISGSGNVAQYAALKCMELGAVVKSLSDSKgtlI---AagpegltpdiiykvqelkdkrlaiA-----------Dckeliskhkyiagar 299
                    689***************************9999864330...24444455444443333322222110...........1222222233444444 PP

  NAD_binding_7  59 ....legadlviaatddrelneriae 80 
                        + ++d+++ + +++e++++ ae
     EPX72089.1 300 pwthVGEVDIALPCATQNEVSAEEAE 325
                    44556668877777777777766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (451 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       337  (0.0187964); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.23s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 3273.45
//
Query:       EPX72090.1  [L=499]
Description: LMBR1-like membrane protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-80  270.6  38.9    3.9e-80  270.2  38.9    1.2  1  LMBR1     LMBR1-like membrane protein


Domain annotation for each model (and alignments):
>> LMBR1  LMBR1-like membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  270.2  38.9   2.2e-84   3.9e-80       7     508 ..       5     441 ..       1     443 [. 0.89

  Alignments for each domain:
  == domain 1  score: 270.2 bits;  conditional E-value: 2.2e-84
       LMBR1   7 lllflllfllallllrrykrkkdqeavvkllvllalalsflivlllPlDiastiyrqnealypcsyylqwlseslikvlWrivYwlsnlllwiilPfaq 105
                 ll++ + +l++++++++y++ +  ++++  +v+l+l+++fl+vll+P+Di++                      +    Wri+Yw++++ +w+ilPf+q
  EPX72090.1   5 LLFLTVPALWTVIWIYKYSQQHSLTWITRAFVFLGLYVPFLVVLLIPFDIVW-----E----------------VSIFKWRILYWTTFIATWFILPFIQ 82 
                 3445555899999***************************************.....4................55667******************** PP

       LMBR1 106 fYvesggftgkgklkrslyenaiiyllllvivlglliyvliilqklsllsiksllpilislantwGlvllilllGyGlvelPrslwreiksdldeelkk 204
                 +Y+es+  t +++lk sly+n+++y+ll+++ l ++ y+ ++l  +s++   ++++++isl ++wGl+++i+llG Glv +Pr++wr  k+ l ++ + 
  EPX72090.1  83 EYIESQFPTAEKRLKDSLYKNLRYYGLLTILSLFVVAYLRFTLRTMSFA---NFKELIISLTYFWGLIFVIFLLGNGLVFVPRNMWR--KAFLHKRARL 176
                 *************************************************...9**********************************..********** PP

       LMBR1 205 lyfeaaklntekeeaereledllkevkklrksisesdplrkyleeilkkvPeeiaeklksnenkteeslaklekqlikalqkrertekqwkrllekale 303
                 l+ +a++++++++e  +e++ + ++ +       + d  r+y+ ++              ++ +te+  + +  ++ +a+++    + +w ++++++  
  EPX72090.1 177 LERKAVNIYSKLQERLDEFSAYSSSSTM------NMD--RSYNLDVR-------------TSYATESDFTTS--AVSQAMSHVFPLQVTWTQMVKEYNL 252
                 *********8888888888833333222......222..22222222.............223345555554..59999******************** PP

       LMBR1 304 lediiknksskekefkssessrrgefakqgklkltptleyywaklllplvllilsiilvllsiiiilseltkllekpplslfalfievsaessfglfga 402
                 ++ i  +k+s++++++             +++ ++p l y +++++ p++++i +++l++ls++i++sel+++    + sl  +f++    ++   f a
  EPX72090.1 253 INSIQTAKASSSYRLYLP----------DSYIQMHPVLAYTLYVWVIPVLRIITACFLAFLSFVIVVSELFLHS---KHSLVGIFLNR--IKDSASFCA 336
                 ****************76..........4467789*********************************955555...457999***55..567777888 PP

       LMBR1 403 elieillilYlmlcayvglfklkl..pnfyrlaphhqTdmsslifnaalllrltsPlclnflglihfdeTaFtqllGsmdvleflggfgfviyypifil 499
                  ++++++i Y+ +c+y+++++ ++  +  y+++p + T   sl+++a++l+rlt Plc+nf +l+ f  T+F++++G+ ++l +lg + +   yp++il
  EPX72090.1 337 -FASFVIINYMRYCTYKSVINTQFasYHRYAIVPSRATGPASLLCFASQLCRLTLPLCYNFTSLQFFP-TQFHKFYGESIDLLPLG-NLISKRYPVCIL 432
                 .9**********************8778899**********************************886.*****************.9*********** PP

       LMBR1 500 llvvatlfn 508
                 ++v+++lf+
  EPX72090.1 433 IPVLFSLFS 441
                 ********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (499 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       950  (0.0529868); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.45
# Mc/sec: 3358.33
//
Query:       EPX72091.1  [L=815]
Description: exocyst complex subunit Sec5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.6e-20   72.0   3.1    5.6e-20   72.0   3.1    1.9  2  Sec5       Exocyst complex component Sec5
  ------ inclusion threshold ------
      0.023   14.6   0.5      0.091   12.6   0.1    2.1  3  GxGYxYP_C  GxGYxYP putative glycoside hydrolase C-terminal do


Domain annotation for each model (and alignments):
>> Sec5  Exocyst complex component Sec5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.0   3.1   6.3e-24   5.6e-20       6     190 .]     136     321 ..     131     321 .. 0.92
   2 ?   -2.1   0.0      0.32   2.8e+03       5      22 ..     737     754 ..     734     759 .. 0.81

  Alignments for each domain:
  == domain 1  score: 72.0 bits;  conditional E-value: 6.3e-24
        Sec5   6 slvksnftkfvkvkdtldqiykefseskteaqedslveeLeeslneairkttllfkpvlenkekadklraaleviernkflFnLPksLkesiakgdydk 104
                  l ++nf+kf+++k+t+d++y ++ ++  e+ +  ++e  eeslneai++ + l ++ +++ +        l v+++ k + +LP++ ++  ++++y+k
  EPX72091.1 136 DLKETNFNKFIATKETIDNVYAQIVSTLGEHGQLNTMEICEESLNEAIKEFHGLNDDYMKQLD---VDYGKLLVLQQCKVFYSLPEKFQQFYEQENYSK 231
                 67799********************999999999999***************99998887665...44456779************************* PP

        Sec5 105 lindYkkakslfestrqslveedkkqvkvfkkvwsevekiieeyrkklwekLleldesqeeflkliskLleLevee....dPiwdflesq 190
                 l+++Ykkak+l+e++  ++++++k   ++++  w+  ++  +++ + +w+++l ++ + +++++ +  Ll+++++     dP+++++ sq
  EPX72091.1 232 LLHEYKKAKKLYEKEHDRALRNNKPLATLMEHAWHIAQSSLDSLASLIWNRILHTEGDFSYIIESLADLLKIKSNPisgrDPVLYAMVSQ 321
                 ***************99999****************************************************997777789999988765 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.32
        Sec5   5 kslvksnftkfvkvkdtl 22 
                 +s+v sn+tkf+ v+ t+
  EPX72091.1 737 MSFVTSNLTKFFLVQCTT 754
                 799********9988765 PP

>> GxGYxYP_C  GxGYxYP putative glycoside hydrolase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1     1e-05     0.091      84     174 ..     181     271 ..     171     293 .. 0.74
   2 ?   -3.0   0.0      0.62   5.5e+03     105     144 ..     409     446 ..     399     452 .. 0.73
   3 ?   -3.2   0.0      0.69   6.2e+03     155     205 ..     578     624 ..     541     636 .. 0.61

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1e-05
                 HHHHHHHHHHHHHHHHHT--EEEEEESSG.....GG-HHHHHHHHHSTT--EEEEEETT--...----EEE-TS-EEEE--EEE-.....TTH CS
   GxGYxYP_C  84 saldeylaktneymkktdlkilgvldndn..envdlaqelidkyaealnidggfyakyaskyaelegsiawsndkPvvsvryllwgdlpsegi 174
                 +a++e+  ++++ymk++d+++  +l  ++    ++l++++ + y +++  + +  +k+a+k +e e++ a  n+kP+++     w  +  +++
  EPX72091.1 181 EAIKEFHGLNDDYMKQLDVDYGKLLVLQQckVFYSLPEKFQQFYEQENYSKLLHEYKKAKKLYEKEHDRALRNNKPLATLMEHAW--HIAQSS 271
                 6689999************99888887776456666666666665555566666677777777777777888******9999999..333333 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 0.62
                 EEEEESSG...GG-HHHHHHHHHSTT--EEEEEETT--.. CS
   GxGYxYP_C 105 lgvldndnenvdlaqelidkyaealnidggfyakyaskya 144
                 +++l  +    ++ +e +++y  +++++g+++ k +s+ +
  EPX72091.1 409 TEFLTGKV--QKNYPEDAKRYGHDPKQMGVIIEKLNSQLT 446
                 55555555..677889999999999999999988766655 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 0.69
                 S-EEEE--EEE-.....TTHHHH-STTSHHHHHHHHHS.---TTSGGGEEEE CS
   GxGYxYP_C 155 dkPvvsvryllwgdlpsegivaelleleqslasainea.arnigsrpafvlv 205
                  +++v+++ +l      ++i + ++++ q++a++++ + ++ +++ p+ +++
  EPX72091.1 578 SFSLVEWDSSLD-----TAIDSCVENARQGNAEELAFIaQTMREKFPGLSFC 624
                 344555555555.....66666666666667767777767777777766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (815 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       850  (0.0474092); expected 358.6 (0.02)
Passed bias filter:                      531  (0.0296168); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.71u 0.26s 00:00:00.97 Elapsed: 00:00:00.44
# Mc/sec: 5572.70
//
Query:       EPX72092.1  [L=125]
Description: histone H2B alpha Htb1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.3e-21   74.9   0.6      1e-20   74.5   0.6    1.3  1  Histone        Core histone H2A/H2B/H3/H4
    1.9e-06   28.0   0.1    3.9e-06   27.1   0.1    1.5  1  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a
    8.1e-05   23.0   0.0    0.00014   22.3   0.0    1.3  1  TFIID_20kDa    Transcription initiation factor TFIID subunit 
  ------ inclusion threshold ------
      0.021   14.9   0.1      0.023   14.7   0.1    1.1  1  YscO-like      YscO-like protein
      0.023   14.7   0.0      0.028   14.4   0.0    1.1  1  DUF3915        Protein of unknown function (DUF3915)
       0.15   12.1   0.0       0.19   11.8   0.0    1.1  1  Xpo1           Exportin 1-like protein


Domain annotation for each model (and alignments):
>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.5   0.6   3.4e-24     1e-20      46     130 ..      19      99 ..       1     100 [. 0.85

  Alignments for each domain:
  == domain 1  score: 74.5 bits;  conditional E-value: 3.4e-24
                 HHHHHHHHHHHXXSXXSXHHHHHHHHHHHH.TTSSSXEEXHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTXSEEXHHHHHHHHHH CS
     Histone  46 valkeirkyqkstdlliqklpfaRvvreivksekedlrisaeavlalqealEallvelfeeAnllakhaKRvTitpkDiqlArrl 130
                  ++k  +k++ + ++++++ ++++v++++++    d +is++a+ +l+++++++++++++eA++la ++K++Ti +++iq+A+rl
  EPX72092.1  19 DTMKSADKKRGKNRKETYSSYIYKVLKQVHP----DTGISNQAMRILNSFVNDIFERIATEASKLAAYNKKSTISSREIQTAVRL 99 
                 4556677777788999***************....*************************************************7 PP

>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.1   1.3e-09   3.9e-06       8      65 .]      40      97 ..      38      97 .. 0.96

  Alignments for each domain:
  == domain 1  score: 27.1 bits;  conditional E-value: 1.3e-09
                   HHHHHHCC.TTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHHH CS
  CBFD_NFYB_HMF  8 vkkImksd.pdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehiklAv 65
                   + k++k+  pd++ i+++A  +++ +v    e++a+eA++++  +k+ ti+   i+ Av
     EPX72092.1 40 IYKVLKQVhPDTG-ISNQAMRILNSFVNDIFERIATEASKLAAYNKKSTISSREIQTAV 97
                   779*****88888.******************************************998 PP

>> TFIID_20kDa  Transcription initiation factor TFIID subunit A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   4.5e-08   0.00014       7      60 ..      42      95 ..      38     100 .. 0.94

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 4.5e-08
                 HHHHCC-SS----HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SEE-HHHHHH CS
  TFIID_20kDa  7 dLvqqvdsetkldedvedlLleiaddFvesvtkfacklakhRksdklevrDiql 60
                   ++qv ++t + ++   +L   ++d  e + + a+kla + k +++++r iq 
   EPX72092.1 42 KVLKQVHPDTGISNQAMRILNSFVNDIFERIATEASKLAAYNKKSTISSREIQT 95
                 679*************************************************95 PP

>> YscO-like  YscO-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.1   7.8e-06     0.023      30     112 ..      13      98 ..       2     117 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 7.8e-06
                 HHHHHHHHHHHHHHHHHHHHHH.HHHHHHH.HHHHH.HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   YscO-like  30 aLekEkeklrkleeerdkvkkh.kkaKvaq.lreel.dkGttsdkikkmkryikvvkeelkqeekkvekQkekVkvAerkvEqare 112
                 a ++ +++++  +++r k +k+ +   + + l+++  d G + +++++++++++ + e+++ e+ k++  ++k ++ +r++  a +
  EPX72092.1  13 AGKAPRDTMKSADKKRGKNRKEtYSSYIYKvLKQVHpDTGISNQAMRILNSFVNDIFERIATEASKLAAYNKKSTISSREIQTAVR 98 
                 5555555666666666555444134445555666533899999*************************************998755 PP

>> DUF3915  Protein of unknown function (DUF3915)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   9.4e-06     0.028      27      94 ..      21      87 ..       8      98 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 9.4e-06
     DUF3915 27 ererederekerekkkerhavcnvlasiavgtelsllsikgnvtfrnvifegfangvalfsalnnkdd 94
                 +  +++r k+r k+     + +vl+++   t +s  +++   +f n ife +a   + ++a n+k  
  EPX72092.1 21 MKSADKKRGKNR-KETYSSYIYKVLKQVHPDTGISNQAMRILNSFVNDIFERIATEASKLAAYNKKST 87
                333344445544.455677899************************************9999999865 PP

>> Xpo1  Exportin 1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   6.3e-05      0.19      22      87 ..      34     100 ..      31     117 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 6.3e-05
                 TTSTTHHHHHHHHHCT.HHHHHHHHHHHHHHHHHHHTSHTTTSCHHHHHHHHHHHHHH.HHHHHHHH CS
        Xpo1  22 nnWpsffddllsllssspsglelllriLkvlpeEiadfsrskleqerrndlkdllrsn.vqkilell 87 
                 ++++s + ++l++++++    +  +riL+++  +i++   +++++  + + k +++s+ +q+ + l+
  EPX72092.1  34 ETYSSYIYKVLKQVHPDTGISNQAMRILNSFVNDIFERIATEASKLAAYNKKSTISSReIQTAVRLI 100
                 579999**********9999999*************9667888888888999999988888777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1010  (0.0563333); expected 358.6 (0.02)
Passed bias filter:                      549  (0.0306208); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 949.95
//
Query:       EPX72093.1  [L=131]
Description: histone H2A beta [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.8e-19   67.3   1.2    1.2e-18   66.5   1.2    1.4  1  Histone_H2A_C  C-terminus of histone H2A
    1.5e-16   61.0   0.0    1.9e-16   60.6   0.0    1.1  1  Histone        Core histone H2A/H2B/H3/H4
    8.2e-06   26.0   0.0    1.3e-05   25.4   0.0    1.3  1  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a


Domain annotation for each model (and alignments):
>> Histone_H2A_C  C-terminus of histone H2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.5   1.2   2.1e-22   1.2e-18       1      33 [.      93     125 ..      93     126 .. 0.97

  Alignments for each domain:
  == domain 1  score: 66.5 bits;  conditional E-value: 2.1e-22
  Histone_H2A_C   1 EELnkLLggVTIAqGGVLPnIhkvLLpkktkkk 33 
                    EELnkLLg+VTIAqGGV+PnI++ LLpk+++k+
     EPX72093.1  93 EELNKLLGHVTIAQGGVVPNINAHLLPKQSGKA 125
                    9*****************************997 PP

>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.6   0.0   3.2e-20   1.9e-16      53     129 ..      15      90 ..       9      92 .. 0.95

  Alignments for each domain:
  == domain 1  score: 60.6 bits;  conditional E-value: 3.2e-20
                 HHHHXXSXXSXHHHHHHHHHHHH.TTSSSXEEXHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTXSEEXHHHHHHHHH CS
     Histone  53 kyqkstdlliqklpfaRvvreivksekedlrisaeavlalqealEallvelfeeAnllakhaKRvTitpkDiqlArr 129
                   q+++++ + ++p+ Rv+r ++k     +r+ a a+++l+++lE+l +e++e+A+++a+++K+ +i p+++qlA+r
  EPX72093.1  15 SAQSRSAKAGLAFPVGRVHRLLRK-GNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIR 90 
                 579999*****************9.9999***********************************************9 PP

>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.0   2.2e-09   1.3e-05       3      65 .]      27      89 ..      25      89 .. 0.97

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 2.2e-09
                   XXHHHHHHHHHCCTTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHHH CS
  CBFD_NFYB_HMF  3 LPiarvkkImksdpdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehiklAv 65
                   +P+ rv +++++ + a+++   A++++a ++e  + e+++ A   + ++k+  i + h++lA+
     EPX72093.1 27 FPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAI 89
                   9***********************************************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       413  (0.0230353); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.21s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 1020.06
//
Query:       EPX72094.1  [L=343]
Description: glutathione S-transferase Gst3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.4e-20   72.1   0.2    7.5e-20   71.0   0.0    1.7  2  GST_N_2   Glutathione S-transferase, N-terminal domain
    1.3e-15   57.2   0.0      3e-15   56.0   0.0    1.6  1  GST_C_2   Glutathione S-transferase, C-terminal domain
    1.5e-06   28.4   0.1    2.8e-06   27.4   0.1    1.5  1  GST_C     Glutathione S-transferase, C-terminal domain
    4.8e-06   26.7   0.1    1.4e-05   25.2   0.0    1.8  1  GST_C_3   Glutathione S-transferase, C-terminal domain
  ------ inclusion threshold ------
      0.023   15.1   0.0       0.39   11.2   0.0    2.4  1  GST_N_3   Glutathione S-transferase, N-terminal domain
      0.045   14.3   0.0      0.097   13.3   0.0    1.5  1  GST_C_5   Glutathione S-transferase, C-terminal domain
        0.1   12.4   0.0       0.22   11.3   0.0    1.6  1  GST_C_6   Glutathione S-transferase, C-terminal domain


Domain annotation for each model (and alignments):
>> GST_N_2  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.0   0.0   2.9e-23   7.5e-20       1      68 [.      78     172 ..      78     174 .. 0.89
   2 ?   -3.1   0.0         4     1e+04      31      47 ..     317     333 ..     295     334 .. 0.63

  Alignments for each domain:
  == domain 1  score: 71.0 bits;  conditional E-value: 2.9e-23
                 S-HHHHHHHHHHHHCT--EEEEE..E..H...-TTSHHHHH.....................HHHCTTTSSSEEE-CTTE..EEESHHHHHHHHH CS
     GST_N_2   1 aCPwahRvlialalkglediisv..v..vlepkgfekseef.....................prlnprgtVPvLwdkdgq..vineSseIlryle 68 
                 aCPwahR+li+++lkgle ++ v  v  +++p+g++ + e                      p++n r+tVPv wd++    v+neS+eI+r l+
  EPX72094.1  78 ACPWAHRTLIVRKLKGLEEVLPVhvVgwLMGPNGWDFNKEHgstgdpvyqspllrnlyyraePNYNMRFTVPVVWDTKHHtiVNNESAEIIRTLN 172
                 7*******************888542669999***888888999999999999***********************633347**********998 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 4
                 TSHHHHHHHHCTTTSSS CS
     GST_N_2  31 fekseefprlnprgtVP 47 
                 f+ +   +++np+g  P
  EPX72094.1 317 FHYTKSHSQINPLGITP 333
                 33334467888887666 PP

>> GST_C_2  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.0   0.0   1.2e-18     3e-15       3      68 ..     224     297 ..     222     298 .. 0.95

  Alignments for each domain:
  == domain 1  score: 56.0 bits;  conditional E-value: 1.2e-18
                 HHCHHHHHCCHCHHHCTTT---SS...CTTCS--HHHHHHHHHHHHHHHHHHS-......---TT-HHHHHHHH CS
     GST_C_2   3 averaleqldaaldaleahLadsp..flfGdqptlaDialapflvrlraagpgf......direaypnlraWle 68 
                 a+e  ++++++al +le+ L++s   ++fGd++t  Di+l++++vr++a++ ++      +ir++yp++++Wl+
  EPX72094.1 224 AYEKNVKIVFEALGKLEEFLKKSGgpYFFGDRLTETDIRLYTTVVRFDAVYVQHfkcnlgTIRHDYPHVNKWLR 297
                 6788899***************99**************************99999*****************97 PP

>> GST_C  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   0.1   1.1e-09   2.8e-06      18      89 ..     219     299 ..     176     302 .. 0.89

  Alignments for each domain:
  == domain 1  score: 27.4 bits;  conditional E-value: 1.1e-09
                 HHHHHHHHHHHHHHHHHHHHHHHHHH..TSSSSSTTSSCHHHHHHHHHHH.....HHHHHTTTTT..TTTSHHHHHHHHHH CS
       GST_C  18 ekkeelvdealekvaevlsaleeelk..kqdylvGdkltlADialvpiln.....wlqrlglafg..qekfpnlkawleri 89 
                 ++ +e+++++ + v+e+l  lee lk  +  y+ Gd+lt  Di l++ +      ++q+++ ++g  + ++p++ +wl ++
  EPX72094.1 219 ATTAEAYEKNVKIVFEALGKLEEFLKksGGPYFFGDRLTETDIRLYTTVVrfdavYVQHFKCNLGtiRHDYPHVNKWLRNL 299
                 5677899*******************99999************7777766588899999999999************9876 PP

>> GST_C_3  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.0   5.6e-09   1.4e-05      27      84 ..     230     297 ..     198     308 .. 0.74

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 5.6e-09
                 HHHHCHHHHHHHHHHCHGTSSSSTTS--HHHHHHHHHHHHHHHH..........TCC.CC-HHHHHHHH CS
     GST_C_3  27 erlpkflkyfekvlkkkgggylvgdklTyADlalfqvldgleea..........eal.kkfpklkalye 84 
                 + + + l+++e++lkk+gg+y++gd+lT  D+ l++ +  +  +               ++p++ ++  
  EPX72094.1 230 KIVFEALGKLEEFLKKSGGPYFFGDRLTETDIRLYTTVVRFDAVyvqhfkcnlgT-IrHDYPHVNKWLR 297
                 3455679999*****89999****************9999998888888665532.2588898887765 PP

>> GST_N_3  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00015      0.39       1      28 [.      73     104 ..      73     177 .. 0.58

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00015
                 EES-TTSHHHHHHHHHHHHHT--....EEEE- CS
     GST_N_3   1 LygfpaSpyarrvrlaLnekglp....vevve 28 
                 Ly + a+p+a r  ++ ++kgl+    v+vv 
  EPX72094.1  73 LYVSLACPWAHRTLIVRKLKGLEevlpVHVVG 104
                 99********************6322244332 PP

>> GST_C_5  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   3.8e-05     0.097      32      80 ..     231     277 ..     211     299 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 3.8e-05
                 HHHHHHHHHHHHHCCHTSSSSECCECC--HHHHHHHHHHHHHHHHCCCC CS
     GST_C_5  32 elddnaayledllakhqgeGPyfldkelsmadvavvPflvrlkavlsyy 80 
                  + ++ ++le+ l k  + GPyf +++l+ +d+ +   +vr+ av  ++
  EPX72094.1 231 IVFEALGKLEEFLKK--SGGPYFFGDRLTETDIRLYTTVVRFDAVYVQH 277
                 455677888888854..679**********************9986554 PP

>> GST_C_6  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   8.7e-05      0.22       4      32 ..     235     265 ..     232     295 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 8.7e-05
     GST_C_6   4 dleaLselL..gdkkyFfGdkPtslDAlvFG 32 
                 +l  L e+L     +yFfGd+ t+ D  ++ 
  EPX72094.1 235 ALGKLEEFLkkSGGPYFFGDRLTETDIRLYT 265
                 667788999663479***********98775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       391  (0.0218082); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 2319.28
//
Query:       EPX72095.1  [L=479]
Description: acyl-coA desaturase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      1e-18   68.1  17.3      1e-18   68.1  17.3    1.6  1  FA_desaturase  Fatty acid desaturase
    3.1e-13   49.7   0.0      1e-12   48.0   0.0    1.9  2  Cyt-b5         Cytochrome b5-like Heme/Steroid binding domain


Domain annotation for each model (and alignments):
>> FA_desaturase  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.1  17.3   1.1e-22     1e-18      10     237 ..      95     308 ..      85     323 .. 0.76

  Alignments for each domain:
  == domain 1  score: 68.1 bits;  conditional E-value: 1.1e-22
  FA_desaturase  10 lllglf.llgitgslaHeaaHgalfkkrklnrwlndllgallglplgisysawrisHlrHHaytngpdeDpdlaplalsrfeglfryllrlllgll 104
                    +++ +   lgitg++++ +aH++++ k++l  ++ ++     + ++  s+ +w ++H+ HH+y  ++d+Dp+        ++g+++ +++++ +l+
     EPX72095.1  95 IVYYFYsGLGITGGYHRLWAHRSYKAKKPLQYFF-AAG---GAAAFEGSIRWWARDHRAHHRY-TDTDKDPY------NVKKGFWYAHVGWMIILQ 179
                    3344443489989*********999777777777.333...6777778***************.6666****......57**************** PP

  FA_desaturase 105 vlgwllalvlglwlrrlarrrapsksrrrkwrllawlllllawlglwlalllllglall.lwlvplllllfllalvl.nyveHyggdwgerqvets 198
                    ++     + +   + +l   +  ++  r++  + +++++++     +++ ++++   +  +++ +++l+++ +a++  n + H     g +++ ++
     EPX72095.1 180 NPR----RIGRTDISDLNTDKLVVFNHRHFLPFATIMAFVV---PSLICGYFWGDYRGGyFYAGVCRLVFVHHATFCvNSLAHM---LGGQPFDDT 265
                    ***....3333377888888888888887777777777776...6666666667666665666655555444444435777776...59******* PP

  FA_desaturase 199 asirsaswllnlltgnlnyHieHHlfP.....gvpwyrLpelhr 237
                    +s+r ++ + +l+t++ + H+ HH+fP     g++wy+++  ++
     EPX72095.1 266 NSAR-NHYITALVTLGEGNHNYHHAFPndyrnGLRWYEYDPTKA 308
                    ****.**********************************99875 PP

>> Cyt-b5  Cytochrome b5-like Heme/Steroid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       1.3   1.1e+04      34      48 ..       9      23 ..       7      24 .. 0.84
   2 !   48.0   0.0   1.1e-16     1e-12      10      73 ..     370     432 ..     360     433 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 1.3
                TCSHHHHTTTTSBBH CS
      Cyt-b5 34 GgesailkyaGkDat 48
                G++++ +  aG+D t
  EPX72095.1  9 GSQASVHPSAGEDNT 23
                889999999999976 PP

  == domain 2  score: 48.0 bits;  conditional E-value: 1.1e-16
                 CTTEEEEEETTEEEECTTTCCCSTTCSHHHHTTTTSBBHHHHHHTT..GGCHHHHHHHHGGEEEEE CS
      Cyt-b5  10 gkndlwvairgkVYDvskflskhpGgesailkyaGkDateafksvv..hsekdaekllkkylvGkl 73 
                 +k + +v i+g V+Dv+ f   hpGg+++++++ GkDat+af+  v  h +  a++ll++y++ ++
  EPX72095.1 370 SKTRPLVLINGVVHDVTGFQ--HPGGQGLLRSAFGKDATAAFNGGVyeHTNG-AHNLLATYRIAVV 432
                 45589999***********8..************************977666.8********9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (479 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       432  (0.024095); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.71u 0.34s 00:00:01.05 Elapsed: 00:00:00.57
# Mc/sec: 2545.87
//
Query:       EPX72096.1  [L=394]
Description: RSC complex subunit Rsc7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.9e-51  173.0   0.0      1e-50  171.7   0.0    1.7  2  CRC_subunit     Chromatin remodelling complex Rsc7/Swp82 subu
  ------ inclusion threshold ------
          2    9.0   6.2        5.8    7.5   6.2    1.8  1  EF-1_beta_acid  Eukaryotic elongation factor 1 beta central a
        7.8    6.9   8.4         16    5.9   0.1    3.3  3  RGS12_usC       C-terminal unstructured region of RGS12


Domain annotation for each model (and alignments):
>> CRC_subunit  Chromatin remodelling complex Rsc7/Swp82 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  171.7   0.0   1.7e-54     1e-50       2     135 .]      84     216 ..      83     216 .. 0.98
   2 ?   -2.2   0.0      0.85   5.1e+03      50      77 ..     291     318 ..     281     324 .. 0.82

  Alignments for each domain:
  == domain 1  score: 171.7 bits;  conditional E-value: 1.7e-54
  CRC_subunit   2 ddeykltkedpegekkidknGkLlggreyrvktFtleeregkklyvLstdlarllgfrdsylffkknpqllkllatqeekedLiergllpsslksrqi 99 
                  dde+++  +dpegekk+++ G L ggreyr++tFt+ +r g++ly+Lst++ar++g+rdsyl+f k+++l+k+++++ ek dLier+++p+s+k+r++
   EPX72096.1  84 DDELNFGVVDPEGEKKVNELGYLNGGREYRCRTFTCLGR-GNRLYMLSTEPARAMGYRDSYLLFLKHRSLHKIIVDDAEKWDLIERNIIPHSYKGRAV 180
                  89999999*******************************.********************************************************** PP

  CRC_subunit 100 klvtarsvFlefGariivkGkrvvDDYyeekakeqg 135
                   +v+ars+F+efGa+iiv+G+r++DDY+e + +++g
   EPX72096.1 181 GIVAARSIFREFGAKIIVGGRRIIDDYWEGEFRARG 216
                  ******************************999876 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.85
  CRC_subunit  50 tdlarllgfrdsylffkknpqllkllat 77 
                  +dla+ l  ++ + +f+ +++ll++  +
   EPX72096.1 291 NDLAKNLTQKQTTGYFEPHSNLLHVPQN 318
                  7899999999999999999999987655 PP

>> EF-1_beta_acid  Eukaryotic elongation factor 1 beta central acidic region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   6.2   0.00097       5.8       2      12 ..      34      43 ..      34      44 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.00097
  EF-1_beta_acid  2 FGSDDEEEDeE 12
                    FGSDDE+ D+E
      EPX72096.1 34 FGSDDED-DDE 43
                    *******.555 PP

>> RGS12_usC  C-terminal unstructured region of RGS12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.3     0.023   1.4e+02     106     124 ..     218     235 ..     216     264 .. 0.77
   2 ?    1.4   0.4     0.065   3.9e+02      31      75 ..     291     336 ..     263     340 .. 0.57
   3 ?    5.9   0.1    0.0027        16      56      86 ..     357     384 ..     346     389 .. 0.83

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.023
   RGS12_usC 106 gEGDisSPNStLLPPpptp 124
                 +EGD++ P   L PPp  p
  EPX72096.1 218 AEGDLADPEDKL-PPPGMP 235
                 8*******9886.777666 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.065
   RGS12_usC  31 essakspgsaeskprspaaalpg....qkspsvPfsaplsPiphvqega 75 
                 +  ak+    ++k++++ + +++      + s+P+ + ++ iph qe++
  EPX72096.1 291 NDLAKNL---TQKQTTGYFEPHSnllhVPQNSQPSRTEWTHIPHDQEES 336
                 3333333...223333333333322223456789999999999999976 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.0027
   RGS12_usC  56 spsvPfsaplsPiphvqegaaqiwkRqsrel 86 
                  ++vPfs   s  phvqe   +i++Rq +el
  EPX72096.1 357 LINVPFSVLASCPPHVQE---AIKRRQEQEL 384
                 5689**************...7899999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (394 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       434  (0.0242066); expected 358.6 (0.02)
Passed bias filter:                      366  (0.0204139); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.34s 00:00:00.99 Elapsed: 00:00:00.55
# Mc/sec: 2173.40
//
Query:       EPX72097.1  [L=189]
Description: ER membrane protein complex subunit 4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.8e-44  148.5   3.1    1.1e-43  148.0   3.1    1.1  1  DUF1077   Protein of unknown function (DUF1077)


Domain annotation for each model (and alignments):
>> DUF1077  Protein of unknown function (DUF1077)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.0   3.1   5.9e-48   1.1e-43       2     116 ..      62     175 ..      61     177 .. 0.96

  Alignments for each domain:
  == domain 1  score: 148.0 bits;  conditional E-value: 5.9e-48
     DUF1077   2 kkeekeelkakkaweialapakslpmnlfmlYmsGnslqifsimmvlmllvnpikallsvnkaFkkleseksksklllqklvyvllqllllalglykln 100
                 k++++++l  kkawe+a++p+k++pmn+++ YmsGnslqifsi++++ml++np+ka+ s  +aF++++s +  ++++l+++vy+l q+ll+a+g+ykl+
  EPX72097.1  62 KQNAEKALVIKKAWELAYSPLKQIPMNIIFAYMSGNSLQIFSIITTFMLFLNPLKAISSSGDAFASFRSVHP-NAMWLPMIVYILSQCLLMAIGIYKLQ 159
                 678899***************************************************************987.78999********************* PP

     DUF1077 101 smGLLPttssDwlafe 116
                 +mGLLPtt+sDwla+e
  EPX72097.1 160 KMGLLPTTNSDWLAWE 175
                 ***************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       750  (0.0418317); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.33s 00:00:00.88 Elapsed: 00:00:00.52
# Mc/sec: 1098.50
//
Query:       EPX72098.1  [L=317]
Description: splicing factor Spf30 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.5e-06   26.1   0.0    9.2e-06   25.4   0.0    1.4  1  Tudor_3    DNA repair protein Crb2 Tudor domain
    0.00062   19.8   0.0      0.001   19.1   0.0    1.3  1  DUF4537    Domain of unknown function (DUF4537)
     0.0015   18.6   0.0     0.0036   17.3   0.0    1.6  1  TUDOR      Tudor domain
     0.0017   18.1   0.1      0.003   17.3   0.1    1.4  1  LBR_tudor  Lamin-B receptor of TUDOR domain


Domain annotation for each model (and alignments):
>> Tudor_3  DNA repair protein Crb2 Tudor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.0     2e-09   9.2e-06       4      50 ..      85     133 ..      82     135 .. 0.93

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 2e-09
                 EEEEE-SSSS--EEEEEEEEEEE-SSS.EEEEEETTS.-EEEEETTSEE CS
     Tudor_3   4 rVfAlfkGkkraYYPAtclgvsssgsq.rykVrFdDg.tpeevdskqvr 50 
                  V+A + + ++ +Y +++ +vs+ g++ +y+++F D+ ++e+v+   ++
  EPX72098.1  85 VVMARWISGDQSFYTGKITAVSGYGANkKYTIQFLDYpEVETVSPRDLK 133
                 69************************9**********999999988777 PP

>> DUF4537  Domain of unknown function (DUF4537)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0   2.3e-07     0.001      50     100 ..      74     125 ..      39     140 .. 0.77

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 2.3e-07
     DUF4537  50 dakehslkvgDkVLAlhdpeeqeYvPGiVlagp.sakeeeltVrfydgkkak 100
                  a++ +  +gD V+A++ +++q+++ G+++a++   +++++t++f d  +++
  EPX72098.1  74 NAQKLEFFPGDVVMARWISGDQSFYTGKITAVSgYGANKKYTIQFLDYPEVE 125
                 344556669*********************99998899*******9977655 PP

>> TUDOR  Tudor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   8.1e-07    0.0036      29     106 ..      54     137 ..      42     145 .. 0.79

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 8.1e-07
                 HHHHHHHHHHHHHHTSSCC..TCSSS--TT-EEEEE.ETTTTEEEEEEE...EEECTTTEEEEEETTTSBEEEEEGGGEEE--G CS
       TUDOR  29 kkleklteelqeyyaskkk..aellapavgegcvav.fsedgkwyRAki...teslddqkveVlfiDyGntetvpvsdlrelps 106
                 +k  kl e+ ++   s+++  a+ l+ ++g+ ++a+ +s d+ +y +ki        ++k++++f+Dy  +etv+++dl++ p+
  EPX72098.1  54 QKQKKLEENQHSTTGSQTSanAQKLEFFPGDVVMARwISGDQSFYTGKItavSGYGANKKYTIQFLDYPEVETVSPRDLKAVPE 137
                 444455555444444444445688999999999997579999*******98888899***********************9995 PP

>> LBR_tudor  Lamin-B receptor of TUDOR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.1   6.8e-07     0.003       5      48 ..      79     125 ..      75     133 .. 0.82

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 6.8e-07
   LBR_tudor   5 kfqdgevVmgRW.PGSsLyyevkvlsfde..kkqlYtVkykDGTele 48 
                  f  g+vVm+RW  G + +y  k++ ++   +++ Yt+++ D  e e
  EPX72098.1  79 EFFPGDVVMARWiSGDQSFYTGKITAVSGygANKKYTIQFLDYPEVE 125
                 5778********779*********99885226789*****9977765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (317 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1786  (0.0996151); expected 358.6 (0.02)
Passed bias filter:                      880  (0.0490825); expected 358.6 (0.02)
Passed Vit filter:                       104  (0.00580066); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.72u 0.40s 00:00:01.12 Elapsed: 00:00:00.55
# Mc/sec: 1721.79
//
Query:       EPX72099.1  [L=2403]
Description: alpha-1,4-glucan synthase Ags1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-20   74.3  13.7    7.7e-19   68.4   4.5    3.6  2  Alpha-amylase    Alpha amylase, catalytic domain
    4.9e-17   62.4   0.1    9.6e-17   61.5   0.1    1.4  1  Glyco_transf_5   Starch synthase catalytic domain
    2.2e-07   30.6   0.0    4.1e-07   29.7   0.0    1.3  1  Glycos_transf_1  Glycosyl transferases group 1
      0.005   16.9   0.1      0.012   15.6   0.1    1.7  1  Glyco_transf_4   Glycosyltransferase Family 4
  ------ inclusion threshold ------
      0.025   13.6   0.1      0.058   12.4   0.1    1.6  1  PHO4             Phosphate transporter family


Domain annotation for each model (and alignments):
>> Alpha-amylase  Alpha amylase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.4   4.5   2.1e-22   7.7e-19       1     331 [.     106     502 ..     106     507 .. 0.66
   2 ?    1.1   1.7     0.063   2.3e+02      74     134 ..     875     932 ..     872     952 .. 0.76

  Alignments for each domain:
  == domain 1  score: 68.4 bits;  conditional E-value: 2.1e-22
                    --CHHHHCTCCCCCCCT-SCEEE..-B-CE-S-TTTTSS-SCECCE-CCC--CCCCCCHHHHHHCTT-EEEEEE--SC--TTSCC........... CS
  Alpha-amylase   1 GDLkGiiekLdYlkeLGvtaiwl..sPifkspqadhgYdiadytkidpefGtnedlkeLiskahekgikvilDlVvNHtsdehew........... 83 
                    GD+ G+   LdY++ LG+ +i++  +P+ ++p  +  +   dyt +d + Gt +++   i+++h++++++ilD  v   +d +             
     EPX72099.1 106 GDIVGLELSLDYIQALGIRGIYIagTPFQNQPWGYDQFSPLDYTILDHHTGTIDQWRSTINAIHSRNMYIILDHTVATLADLVGIvdhlndssgvp 201
                    99*********************666999999777777779********************************88888888777766677777778 PP

                    ....CHCCHHSTTSGGGCCC-E.........................ESS-STTC-TTTTCSCEECTTTTCEEESSS-TTS-BB-TTTCCCCCCCC CS
  Alpha-amylase  84 ....fkeslkkkgepkrdyyiwkegk...................eekeppnnwkslfdgsaweydekaqeyylhlflkklpdLnteneevrkelk 156
                          +++ k++++++d+ + +  +                    +   +++  ++ d +a+  +  +q   l +f++ ++ L   n++v   l+
     EPX72099.1 202 fslnEYNAMWKTDQHYADFNFTNVYNtsceypkfwgedgspvalqYKGCYDSDFDQYGDTEAFGAHPDWQ-RQLSKFASVQDRLRDWNPNVAIRLE 296
                    8766444444567777777776555566666666665555655543333444444467777777666564.369********************** PP

                    CCCCCCCTTT.-SEEEETTCCCTTTCCCCHCCHCCHHHHHHHHHHHTC...CGTT-EEEEE-TT-SCCCHCCCC-CGG-S...ICECCITTCGGGC CS
  Alpha-amylase 157 dvvkfwlekg.idGfRlDvvkhvskvealesngeflheftqalnetva...srkevmtvgEvssdasedlrvyttearle...lemvldfphldva 245
                     ++ +++    +dGfR+D + ++          +f+ ++ + + + ++   ++k++ +vgEv +++s     y   ++ +   +++++ +  +  +
     EPX72099.1 297 HLSCLVISMLdVDGFRIDKATQMTV--------DFIADWSMSVRNCARqkyNKKNFLIVGEVTGSSSYGSIYYNRGRQPDqrpSNSTIAYNLTIDD 384
                    *7766666555*******9999999........666666666666555555566666666666655543332222111110001111111111111 PP

                    C-CTS.TTSB-SS-................................HHHHHHH.HHHHHHHS-C..CCTTCEEES--TTS--HHHHTTSSTTTTHH CS
  Alpha-amylase 246 qkaki.keqlksis................................akklkel.lkkwlkalee..aaeeavtflgnHDqeRilsrlgddsaeaek 305
                    +k++   +++  ++                                 +++ ++ +++++ +++    + + +  + n D  R +s ++ + +    
     EPX72099.1 385 NKYSLrDKNHGGFDssafhysvyraivrflgmdskveigydtpsmfTDAWTHIqINEDAVNMNTgvIDARHMYGITNNDLFRWGSLMNGTGR---- 476
                    111111111111112333355555666666666666665555444344444432556666666666677888889999********999994.... PP

                    HHHHHHHCCCTSSSEEEEETTCCCT- CS
  Alpha-amylase 306 klklaaillltlrGvpviYyGeEigm 331
                     +   +i +l+++G+p  YyG+E+gm
     EPX72099.1 477 AILGTMITTLMFPGIPLLYYGDEQGM 502
                    666667778899*************9 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.063
                    -SC--TTSCCCHCCHHSTTSGGGCCC-E......ESS-STTC-TTTTCSCEECTTTTCEEE CS
  Alpha-amylase  74 vNHtsdehewfkeslkkkgepkrdyyiwkegkeekeppnnwkslfdgsaweydekaqeyyl 134
                     NH+s   e f+ s++  +++ +d+ +++ g  +k +p+nw   +++++we +    +y+ 
     EPX72099.1 875 LNHSSPGAEKFRYSRD-FQSTWSDWLDYNGG-LTKLKPTNWT-GTKEQRWEGEHVHVQYWS 932
                    6********9998888.77788888887655.7899999998.778888888777766654 PP

>> Glyco_transf_5  Starch synthase catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.5   0.1   2.7e-20   9.6e-17       2     189 ..    1149    1331 ..    1148    1357 .. 0.75

  Alignments for each domain:
  == domain 1  score: 61.5 bits;  conditional E-value: 2.7e-20
  Glyco_transf_5    2 ilfvasEvapl.....aktGGLadvvgaLpkaLaklghdvrvilPrygaikeekkeleevaelskaaedevevev..ekvkvaklkkdgvdvy 87  
                      +l+++ E+        +k GGL+ +++ ++k L+++  d   ++P  g+i   +  +ee a+++      v++    ++++v++++ d+++++
      EPX72099.1 1149 VLIATLEYDITdwqirIKIGGLGVMAQLMAKNLKHQ--DLVWVVPCVGDIVYPE--AEEAAPIE------VKIIDqtYTINVYHHYLDNIKYV 1231
                      67777777333336679****************986..899999**97777753..55666553......3333235999************* PP

  Glyco_transf_5   88 fldnpeffdreg..lYgdkgedyednaerfalfsraalelleklgwkpdvihahDWhtalvpallkelykerglfkkiktvftiHNlayqgrf 178 
                      +ld+p f ++++  +Y ++  d    a  ++++++ ++e++++  +  d+ h++D+h al+p++l            i++++++HN ++qg +
      EPX72099.1 1232 LLDAPVFRRQTTvePY-PARMDDLGSAIFYSAWNQCIAEVIRR--NPIDIYHINDYHGALAPCYLLPDV--------IPVALSLHNAEFQGLW 1313
                      ******76555589**.44777788999999************..479*****************9977........**************** PP

  Glyco_transf_5  179 p......kdel.aalglp 189 
                      p      k+e+ a  ++ 
      EPX72099.1 1314 PlrtaeeKEEVcAVYNIS 1331
                      *66544433333334444 PP

>> Glycos_transf_1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   0.0   1.1e-10   4.1e-07      10     127 ..    1434    1552 ..    1429    1593 .. 0.87

  Alignments for each domain:
  == domain 1  score: 29.7 bits;  conditional E-value: 1.1e-10
                       TTTTT-EEEEEESS-TTTTTHHHHHHHHHCCCCCHCSCEEEEEES.......STTHHHHHHHHHHHCTTCGGGEEECCH.SSSHHHHHHCES CS
  Glycos_transf_1   10 gknekkkiilsvgrlekeKgvdllikafallkkqlnpnvklviaG......ngeeekelkklaeelelsdnviflgevs.redleellknad 94  
                       + n+k  ++++vgr +++Kgvdl+ + +++l +    +v+l+ +G      ++   ++l  l++++      +++   +  +  + +++ ad
       EPX72099.1 1434 EVNDKYDLLVFVGRWSNQKGVDLIADIAPSLLE--SYKVQLICVGpvidlyGKFAAEKLDLLMKKYPT----RVFSSPKfTQLPPYIFTGAD 1519
                       5689999************************97..6***********988766677778888888877....444444434688999999** PP

                       EEEEEESSBSS-HHHHHHHHTT--EEEETTTTH CS
  Glycos_transf_1   95 ifvlpsisEgfGivllEAmaaglpviasnaggp 127 
                        +++ps+ E+fG+v++E    g+  i  ++gg+
       EPX72099.1 1520 FALIPSRDEPFGLVAVEFGRKGTLGIGAKVGGL 1552
                       *****************9999998888888886 PP

>> Glyco_transf_4  Glycosyltransferase Family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.1   3.3e-06     0.012      43     116 ..    1244    1317 ..    1167    1339 .. 0.65

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 3.3e-06
  Glyco_transf_4   43 vprvplpllkrllrslaflr..rlrrllkrekpDvvHahspaalgaallalrrrlgiplVltvHglyekrllkarl 116 
                      v+ +p + +     ++ +++   ++++++r+ +D+ H+++++ ++a    l     ip+ l++H+ + ++l++ r 
      EPX72099.1 1244 VEPYPARMDDLGSAIFYSAWnqCIAEVIRRNPIDIYHINDYHGALAPCYLLP--DVIPVALSLHNAEFQGLWPLRT 1317
                      33333333333333333333226899******************99998888..6************754444433 PP

>> PHO4  Phosphate transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   1.6e-05     0.058     133     251 ..    2160    2396 ..    1984    2398 .. 0.67

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.6e-05
        PHO4  133 aallfllvkrlilvkeklknalralpvlvlvtiailalsilfkge.................................................... 177 
                  a++l+                                                                                            
  EPX72099.1 2160 AFILYKG-------------------------------------Lpqyyrqlsgtipafyksllrrklvvwfciavflqnfwlstlngrswsyfwdi 2219
                  3333332.....................................23333333333333333333333333333333333334444444445555555 PP

        PHO4  178 ................................................................................................. 177 
                                                                                                                   
  EPX72099.1 2220 geipqwqifllmiafyivlwllllgvlawvarthswiicvfgvglgaprwvqtfwatsniglylpwagragpylgrtlwlwlgvldaiqnvgigmil 2316
                  5555555566666666666666667777777777777777777777777777777777777777777778888888888888887777777777666 PP

        PHO4  178 .skkddeeteklfkflqvvsaalvsfahGanDvanaiGpllaalisiyk.......ask.evplwvlllgglaialGlllgGk 251 
                   ++  ++++ +++ + q++ aa+     G   + n  Gp   ++++ ++       a   + p+w+ +++ lai++G+l + +
  EPX72099.1 2317 lQTLTRRHVASTLMTGQIIGAAATM--IGRAGAPNRLGPA-NVFLDFTQwtrgdgsAILaSAPFWICIICQLAICVGFLAFFR 2396
                  5345677788888899999988765..5666679******.5566777776554432333559**************998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2403 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       667  (0.0372023); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.35u 0.37s 00:00:01.72 Elapsed: 00:00:00.59
# Mc/sec: 12193.75
//
Query:       EPX72100.1  [L=287]
Description: 3-hydroxyacyl-CoA dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.2e-63  213.0   0.0    5.6e-63  212.6   0.0    1.0  1  adh_short_C2  Enoyl-(Acyl carrier protein) reductase
    1.4e-49  168.3   0.0    1.6e-49  168.0   0.0    1.1  1  adh_short     short chain dehydrogenase
    1.2e-09   38.3   0.0    1.6e-09   37.9   0.0    1.1  1  KR            KR domain
  ------ inclusion threshold ------
      0.016   14.6   0.0      0.021   14.2   0.0    1.1  1  DUF1776       Fungal family of unknown function (DUF1776)


Domain annotation for each model (and alignments):
>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  212.6   0.0   1.3e-66   5.6e-63       4     232 ..      53     282 ..      49     283 .. 0.96

  Alignments for each domain:
  == domain 1  score: 212.6 bits;  conditional E-value: 1.3e-66
                   TSHHHHHHHHHHHTT-EEEEEESSGGH..HHHHHHHHHHTTSE.E.EE--TTSHHHHHHHHHHHHHHHSSEEEEEE-----EGCSS-GGGH-HHHHH CS
  adh_short_C2   4 sgIGraiAkalaeeGaevvltdlneea..kkrveelaeelgae.v.lecDVtdeeqvealveevvekfgklDilvnnagiapklkgpfletsreefd 96 
                   sgIG+a+A  +a+eG ++v+t l ee+  ++++++l e+ g++ +    D ++ e++++lv+ +vek+g++D+lvnnag+ +   + ++++s+e++d
    EPX72100.1  53 SGIGKAAALMFAREGSDIVITCLPEERddAEHTKQLIEKEGRKcFyWTGDLSSSENCRNLVQFTVEKLGGIDVLVNNAGYQKV-ANTIEDISDEQWD 148
                   8************************998899**********99647************************************8.9************ PP

                   HHHHHHTHHHHHHHHHHHHHCTSCCEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCTGGGGSTTHHHHHHHHH CS
  adh_short_C2  97 raldvnlyslfllakaalplmkeggsivnlssvgaervvpnynaygaaKaalealtrylAvelgpkgiRvNavspgpikTlaasgikgfdelleele 193
                    ++++n+y++f ++kaal+++k+g+sivn +s+ a ++ p+ + y+++K+a++++tr++ ++++++giRvNav+pgpi T+++ +    ++ + e+ 
    EPX72100.1 149 FTFKTNIYAFFWITKAALKHLKPGSSIVNAASINAYVGRPDLSDYTTTKGAIVSFTRAVSNQYASRGIRVNAVAPGPIYTPLVHSTF--SKEMIEAS 243
                   **********************************************************************************98774..55555667 PP

                   HHSTTSS-B-HHHHHHHHHHHCSGGGTT--SEEEEESTT CS
  adh_short_C2 194 araplgrlgtpeevaeaalfLasdeasyitGqtlvvDgG 232
                   ++ p+gr+g+p+eva+++lfLa  +a yitGqt++v+gG
    EPX72100.1 244 NQVPMGRMGQPSEVASCYLFLACSDAGYITGQTIHVNGG 282
                   89************************************9 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  168.0   0.0   3.6e-53   1.6e-49       4     193 ..      47     237 ..      44     239 .. 0.92

  Alignments for each domain:
  == domain 1  score: 168.0 bits;  conditional E-value: 3.6e-53
                 EEESTTSHHHHHHHHHHHHTT-EEEE.EESCH.HHHHHHHHHHHHTTSEEEEEE-TTTSHHHHHHHHHHHHHHHSSESEEEE---S.S--SSGGGCSHH CS
   adh_short   4 lvtGassGIGraiakelakeGakvvv.vdrse.ekleevakelkeegakalaiqvDvtdreevealvekavkklgkldvLvnNAGi.tgsgpfselsee 99 
                 l+tG++sGIG+a a  +a+eG ++v+ +  +e +++e++++ +++eg+k +++++D++++e++++lv+  v+klg++dvLvnNAG  +  ++++++s+e
  EPX72100.1  47 LITGGDSGIGKAAALMFAREGSDIVItCLPEErDDAEHTKQLIEKEGRKCFYWTGDLSSSENCRNLVQFTVEKLGGIDVLVNNAGYqKVANTIEDISDE 145
                 8************************986655515666677777777****************************************666778999**** PP

                 HHHHHHHHHTHHHHHHHHHHHHHHHHCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHHHHHHCTH CS
   adh_short 100 ewervievNltgvflltravlpamlkqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdmakelrek 193
                 +w+ ++++N+ + f++t+a+l++++   + +Ivn +S+++ v+ + ++ Y+++K+a++++tr++++++a++girvnavaPG++ T++++++ +k
  EPX72100.1 146 QWDFTFKTNIYAFFWITKAALKHLK--PGSSIVNAASINAYVGRPDLSDYTTTKGAIVSFTRAVSNQYASRGIRVNAVAPGPIYTPLVHSTFSK 237
                 ***********************77..999*********************************************************9988776 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.9   0.0   3.6e-13   1.6e-09       4     166 ..      47     210 ..      45     226 .. 0.86

  Alignments for each domain:
  == domain 1  score: 37.9 bits;  conditional E-value: 3.6e-13
                 EEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHTT-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE------.---TTT-- CS
          KR   4 litGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaelealgaevevvaaDvsdkdavealleeikaeeppikGvihaAgvlr.dklleemt 101
                 litGG  g+G++ a + a++g   ++ +  +  +++d++++ + +e+ g ++ +   D+s++++ ++l++   ++ + i   ++ Ag  +  +++e+ +
  EPX72100.1  47 LITGGDSGIGKAAALMFAREGSDIVITCLPE--ERDDAEHTKQLIEKEGRKCFYWTGDLSSSENCRNLVQFTVEKLGGIDVLVNNAGYQKvANTIEDIS 143
                 9**************9999999887777777..677778788888999*************************999************997899***** PP

                 HHHHHHHHTTTTHHHHHHHHHTTT..S--SEEEEEEEHHHHH--TT-HHHHHHHHHHHHHHHHHHHH CS
          KR 102 aedleqvlapKvkGawnLhelled..esldffvlfSSiagllgsagqanYaaaNaflDalaeyrrsq 166
                 +e+++  ++  + +   + ++  +  ++   +v  +Si + +g +  ++Y+++   + ++ +  ++q
  EPX72100.1 144 DEQWDFTFKTNIYAFFWITKAALKhlKPGSSIVNAASINAYVGRPDLSDYTTTKGAIVSFTRAVSNQ 210
                 **************98888887777999**********************99876665555544443 PP

>> DUF1776  Fungal family of unknown function (DUF1776)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   4.7e-06     0.021     105     196 ..     136     222 ..     116     246 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 4.7e-06
     DUF1776 105 tgpietiplsswaselnerllspiltlqallplltsrakqkakiivvnpsissslnlpfhapEalvssalsalfevLkrelrphnidvtqik 196
                 +  ie i+ ++w  ++++++ +++ +++a l++l+         iv  +si + +  p  +  +++ +a+ +++++ ++++++ +i v  + 
  EPX72100.1 136 ANTIEDISDEQWDFTFKTNIYAFFWITKAALKHLKP-----GSSIVNAASINAYVGRPDLSDYTTTKGAIVSFTRAVSNQYASRGIRVNAVA 222
                 5579*******************************6.....4568999**********************************9999998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (287 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       405  (0.0225891); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.33s 00:00:00.93 Elapsed: 00:00:00.53
# Mc/sec: 1632.76
//
Query:       EPX72101.1  [L=119]
Description: hypothetical protein SOCG_04794 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       379  (0.0211389); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.42
# Mc/sec: 843.09
//
Query:       EPX72102.1  [L=163]
Description: caffeine induced death protein Cid2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.7e-31  107.7   2.8    8.9e-31  107.5   2.8    1.0  1  Cid2      Caffeine-induced death protein 2


Domain annotation for each model (and alignments):
>> Cid2  Caffeine-induced death protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.5   2.8     5e-35   8.9e-31       1     159 [.       9     148 ..       9     149 .. 0.83

  Alignments for each domain:
  == domain 1  score: 107.5 bits;  conditional E-value: 5e-35
        Cid2   1 CfstselrdfLrlsRaaiDDtItqrLNalstpsrsagfdpsstalaipkesaCaefleevLfpsWqaRedvieyCakvaesedkedeeaalkeeeeaka 99 
                 C+++++l+++Lr  R+ iDDtI+ +LN+++ +s   g+ ++      ++e++C+++++e Lf+ W +R+++++ C++v e+e ++++ + + +    ++
  EPX72102.1   9 CLNIRYLKNVLRKARK-IDDTIQLSLNSAKWESP--GQARE------SQEQRCNRVKQE-LFQGWLSRDNFLKDCIAVTEEELSKNSPSSNVN---PTS 94 
                 ****************.************76665..33332......25679*****98.********************9955533222222...222 PP

        Cid2 100 aerasvderlDpyaardrleeresrlkeaeklarlvrnerkvEsIvrartwevlkerCge 159
                 ++   v+erlDpya++     +e +++ +e++++ +++e++vE+I+r++twe+l++ C+ 
  EPX72102.1  95 EKPL-VSERLDPYAKE-----QEIKISPLEEVSMTLKSEQTVENIIRDQTWETLTNACPG 148
                 2223.99*********.....8888889******************************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       812  (0.0452898); expected 358.6 (0.02)
Passed bias filter:                      505  (0.0281667); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1266.13
//
Query:       EPX72103.1  [L=139]
Description: ubiquitin conjugating enzyme Mms2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-17   62.7   0.0      3e-17   62.6   0.0    1.0  1  UQ_con    Ubiquitin-conjugating enzyme
  ------ inclusion threshold ------
      0.051   13.9   0.0      0.059   13.7   0.0    1.2  1  RWD       RWD domain


Domain annotation for each model (and alignments):
>> UQ_con  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.6   0.0   3.4e-21     3e-17      19     116 ..      28     130 ..       9     138 .. 0.78

  Alignments for each domain:
  == domain 1  score: 62.6 bits;  conditional E-value: 3.4e-21
                 EEEEE..TTEECEEEEEEEB.TTSTTTTEEEEEEEE--TTTTTS--EEEESST-SCTTBE.TTSBB-...CGGGSTTT--TTSHHHHHHHHHHHHHHS- CS
      UQ_con  19 aklvd..denlfewkvlikgpedtpYeggvFklelefpedYPlkpPkvkfvtkifHPnvd.ksGevc...ldiLkeekWspaltlesvllsiqsLlaep 111
                  +l++  d +l  w+++i gp++++ e+ ++ ++++ + +YP  pP+v+fv+ki  P vd ++Ge+    +  L+  +W++ +t+e++ll++ + +a++
  EPX72103.1  28 YGLTNadDISLSDWNATILGPAHSVHENRIYSVKIHCDGKYPDAPPRVTFVSKINLPGVDnETGEINpnkIGCLR--HWKREYTMETILLELKKEMASS 124
                 44444225799*******************************************************822244555..7************998765444 PP

                 .-TTS- CS
      UQ_con 112 .npesp 116
                  n + p
  EPX72103.1 125 sNRKLP 130
                 266655 PP

>> RWD  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   6.6e-06     0.059      46      82 ..      40      90 ..       6     133 .. 0.66

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 6.6e-06
                ............TT-CEEEEEEEEE-SSTTSS--EEEEEECCSS-.....H CS
                x.........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....x RF
         RWD 46 e.........feekkkpslkleiklpeeYPeeaPiislsstenlp.....k 82
                +         ++  ++  ++++i++  +YP+ +P +++ s+ nlp      
  EPX72103.1 40 DwnatilgpaHSVHENRIYSVKIHCDGKYPDAPPRVTFVSKINLPgvdneT 90
                155555555566667778899*******************99666433330 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       254  (0.014167); expected 358.6 (0.02)
Passed bias filter:                      240  (0.0133861); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.27s 00:00:00.66 Elapsed: 00:00:00.43
# Mc/sec: 963.11
//
Query:       EPX72104.1  [L=138]
Description: hsp20-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-19   69.5   0.0    2.5e-19   69.3   0.0    1.1  1  HSP20       Hsp20/alpha crystallin family
    1.5e-11   43.7   0.0      2e-11   43.3   0.0    1.2  1  ArsA_HSP20  HSP20-like domain found in ArsA
     0.0018   19.3   0.0     0.0029   18.6   0.0    1.5  1  CS          CS domain


Domain annotation for each model (and alignments):
>> HSP20  Hsp20/alpha crystallin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.3   0.0   4.2e-23   2.5e-19       2     102 .]      38     138 .]      37     138 .] 0.92

  Alignments for each domain:
  == domain 1  score: 69.3 bits;  conditional E-value: 4.2e-23
                 --SSEEEEEEEEE-TT--CCCEEEEEETTEEEEEEE--....---TT----SS---EEEEEE--STTB-TTT-EEEEETTEEEEEEEBSS--..----- CS
       HSP20   2 ikeeeeefevkldvpglkkeelkvkvednrvlvkgehe..eeeedekglikerssrkFsrkftLPenvdadkvkaslkdGvLtvtvpkkepekkkkerk 98 
                  +e+++  ev ++vpg+ k++l+v++++++++v+ge++  e + +    ++er  + Fsr+++LP+ vd+  v+aslkdG+L++ + kk+ e  ++ + 
  EPX72104.1  38 LRETDNTLEVDVEVPGIPKDNLHVDLDGRKLTVSGERKpdESQAGPLIRWSERCFGAFSRTIALPQHVDDRMVQASLKDGILSIIMYKKQME--SSTKI 134
                 57899*********************************855666667789**************************************9999..68999 PP

                 ---- CS
       HSP20  99 iqiq 102
                 ++iq
  EPX72104.1 135 VEIQ 138
                 9997 PP

>> ArsA_HSP20  HSP20-like domain found in ArsA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.3   0.0   3.3e-15     2e-11       1      63 []      42     123 ..      42     123 .. 0.96

  Alignments for each domain:
  == domain 1  score: 43.3 bits;  conditional E-value: 3.3e-15
  ArsA_HSP20   1 ddeyvlkldLPfvdkeeidlsrsgdeLtIkig....................nfrRqitLPsvlarkevtsAkfedgvLeIrF 63 
                 d+  ++++++P++ k+++++  +g  Lt++ +                     f+R+i+LP++++++ v +A+++dg L I +
  EPX72104.1  42 DNTLEVDVEVPGIPKDNLHVDLDGRKLTVSGErkpdesqagplirwsercfgAFSRTIALPQHVDDRMV-QASLKDGILSIIM 123
                 67889**************************************************************66.**********965 PP

>> CS  CS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0   4.9e-07    0.0029       6      48 ..      39      77 ..      34     125 .. 0.68

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 4.9e-07
                EEETTEEEEEEE-TTCTTTTTCEEEEEETTEEEEEE.TSCEEEE CS
          CS  6 yQtldeVvvtiyvkkvnikkkdvkvefkerslkvki.gkeklli 48
                 +t+++++v ++v+++  +k++++v++  r+l+v+  +k   ++
  EPX72104.1 39 RETDNTLEVDVEVPGI--PKDNLHVDLDGRKLTVSGeRK---PD 77
                699************9..*****************8444...22 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       271  (0.0151152); expected 358.6 (0.02)
Passed bias filter:                      255  (0.0142228); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 990.37
//
Query:       EPX72105.1  [L=744]
Description: NatA N-acetyltransferase complex subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     3e-178  594.0  23.2     2e-176  587.9  19.4    2.4  3  NARP1       NMDA receptor-regulated protein 1
    1.1e-09   37.7  18.5        1.9    8.8   0.1    8.7  9  TPR_2       Tetratricopeptide repeat
    1.7e-08   34.5   2.5        1.4    9.1   0.0    5.1  5  TPR_9       Tetratricopeptide repeat
    2.1e-08   34.5  19.8      0.093   13.3   1.3    6.7  7  TPR_19      Tetratricopeptide repeat
    7.4e-07   29.1   0.5       0.68   10.4   0.0    5.8  5  TPR_17      Tetratricopeptide repeat
    1.2e-05   25.8   9.8         19    6.0   0.1    6.7  7  TPR_16      Tetratricopeptide repeat
    0.00024   21.7  14.5         14    6.8   0.1    8.1  9  TPR_14      Tetratricopeptide repeat
    0.00067   20.1  14.6        3.8    8.4   0.4    7.0  6  TPR_6       Tetratricopeptide repeat
     0.0044   17.1  16.0       0.73   10.2   0.0    6.9  7  TPR_8       Tetratricopeptide repeat
     0.0045   17.2  20.6      0.066   13.4   0.3    6.5  7  ANAPC3      Anaphase-promoting complex, cyclosome, subunit 3
     0.0053   16.2   5.9       0.84    8.9   0.5    3.4  3  TPR_MalT    MalT-like TPR region
     0.0059   16.9  18.4      0.055   13.8   0.2    6.8  7  TPR_12      Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.074   13.7   1.2         10    7.1   0.1    3.3  2  TPR_4       Tetratricopeptide repeat
       0.11   13.0   2.1       0.23   11.9   0.0    2.7  3  YicC_N      YicC-like family, N-terminal region
       0.45   10.6  11.3        3.7    7.7   0.0    5.6  6  Fis1_TPR_C  Fis1 C-terminal tetratricopeptide repeat
        2.6    8.0  23.8          9    6.3   0.6    7.7  9  TPR_1       Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> NARP1  NMDA receptor-regulated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.2   0.0    0.0018         2     199     249 ..      37      87 ..      15      96 .. 0.86
   2 ?   -2.9   0.0         2   2.3e+03     119     150 ..     111     143 ..     106     154 .. 0.78
   3 !  587.9  19.4  1.8e-179    2e-176       2     515 .]     206     721 ..     205     721 .. 0.96

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0018
                 HHHHHHHT-SHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHHHHHH CS
       NARP1 199 AqhydklgsrekAleyidkaiehtptlvelyltKarilkhaGdlkkAaevm 249
                 A    ++++++k l+ i++ ie++p+  e    K+ +l   G++k+ +e +
  EPX72105.1  37 ALKCYETRQYKKGLKAIESVIEKHPEHGESIALKGILLHSLGQIKEGYENV 87 
                 555667899************************************998865 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2
                 HHHHHHHHHHHHH.HHHHCT-TTHHHHHGGGGG CS
       NARP1 119 GeeFkelvdkYlr.kaLrkgvPslfanlksLYe 150
                 ++++ ++++ Y++ ++L+kg  sl ++l  L +
  EPX72105.1 111 DKDYVQAAKCYINaQKLEKGNTSLLRDLALLQS 143
                 678899999999735799999999999987765 PP

  == domain 3  score: 587.9 bits;  conditional E-value: 1.8e-179
                 HHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGG---HHHHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TT-CHHHHHHHHHT..SSS.....-HHHHHHH CS
       NARP1   2 eesellLyknqiieeagkleeAlehLeekekqivDklavketkaelllkLgrkeeAeatyeaLlernpenskYyeglekakklske.....deeallal 95 
                 eese  L+ n +i +++ +  A+ehL ++ek+i+D  a++e+k  ++l L++++eA+at+ +Ll+rn++n++Yy++l++a +++++     + +++l+l
  EPX72105.1 206 EESESQLFINLVILKKDGTAAAYEHLLSEEKKILDLTAFLEIKVGYELTLEKFDEAKATLIRLLDRNSDNHDYYHKLQQAYGYEDDkhnvlNFDKWLSL 304
                 89*******************************************************************************877775555577899*** PP

                 HHHTTTS-TT-SHHHHTHHHH--HHHHHHHHHHHHHHHHHCT-TTHHHHHGGGGGGSCHHHHHHHHHHHHHTTTTTSSSSTTGG.GSS----SSHHHHH CS
       NARP1  96 ydelaekyprsdaprRlpLdfleGeeFkelvdkYlrkaLrkgvPslfanlksLYedkeKvkileelvegyvkslktsgklsesdnedsekepesallwv 194
                 yd+++  yp+s++p+R+pLd l+G+ F + vd+Ylr +L++g+Ps+f+++ksLYed +K+k++e+lv++y++ l+ + k+s++d   +e +++++llw+
  EPX72105.1 305 YDKISMLYPKSECPKRMPLDKLSGDLFAQRVDSYLRAKLKRGIPSVFVDIKSLYEDASKCKVVEKLVSDYASCLSDHAKFSTAD---TEVQIPTTLLWT 400
                 ********************************************************************************9877...799********* PP

                 HHHHHHHHHHHT-SHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHHHHHHHHHHHCTTT-HHHHHHHHHHHHHTT-HHHHHHHHTTTS-TTS.. CS
       NARP1 195 lyflAqhydklgsrekAleyidkaiehtptlvelyltKarilkhaGdlkkAaevmeearklDlaDRyiNskcakymLradeveeAeetvslFtreev.. 291
                 +y+lAqh+d++++ ++A +yi+ a++htptlvely+t ari+kh+G l++A+e+m+ arklDl+DR++N+kcakymLr++e+e A++tv+lFtr+e+  
  EPX72105.1 401 YYYLAQHFDYTRELSQAEHYISLALQHTPTLVELYMTQARIFKHQGKLQEAMEAMDFARKLDLQDRFVNNKCAKYMLRNHENELAANTVGLFTRNEAvg 499
                 ************************************************************************************************999 PP

                 HHHHHHHHTT-HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHCTTTHHHHHHHHT-HHHHHHHHHHHCTTT-SHHHHHHHHHHHHHHHHHHH-T CS
       NARP1 292 daledlnemqcmWfetedgeaylrqkklglALKrfhavekhFdeieeDqFDFHtyclRkmtlraYvdllrledelrshpfyvkaakgaievYlkledkp 390
                 + ++dl++mqc+W+++ed+++++rqkk+++ALKrf+av  +F+ +++DqFDFH++++Rk+t+r Y+dll +ed ++++ ++++a + a ++Yl+l+d+p
  EPX72105.1 500 GSVGDLADMQCLWYMLEDAKSFYRQKKYAMALKRFNAVISIFEAWADDQFDFHFFAFRKNTIRNYLDLLSWEDGVFNNSVFFEACQLATQIYLDLFDHP 598
                 *************************************************************************************************** PP

                 TGGG---H....HHHHT-S-HHHHHHHHHHHHHH.HHHHHHHHHHHHHHH--.......-------------S-SSSTTTT-S-HHHHHHHHHTTTGGG CS
       NARP1 391 kakeeeke....eaksaelseaerkklrkkakka.ekkaekeeaekaekekekkaaekkakkedeeakkededplgekLvkteepLeeAlkflkpLlkl 484
                  a  ++k     + ++++l+e+erkkl kk+kk+ +k++e++e+ k++++       ++ak+ed+++ k dedplge+Lv t++pL++A+k++ +Ll++
  EPX72105.1 599 FARYGPKPadyeKLSQGNLDEEERKKLMKKLKKDiSKRHERAEKIKETDK-------ARAKSEDGTPVKFDEDPLGEELVSTSTPLQDAQKYMDKLLSV 690
                 99999988444456667*****************8888888887755544.......45899************************************* PP

                 TTT-THHHHHHHHHHHHTT-HHHHHHHHHHH CS
       NARP1 485 aaeniethllafevyiRkkklllalkalkka 515
                 ++en  t lla  +y R+++  +a ++l++a
  EPX72105.1 691 SKENPTTLLLAAKLYGRQGDSEAANRYLEQA 721
                 ************************9999987 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.028        32       5      34 .]      34      63 ..      31      63 .. 0.90
   2 !    8.8   0.1    0.0017       1.9       3      34 .]     100     131 ..      99     131 .. 0.91
   3 ?   -0.2   0.0       1.3   1.5e+03       4      18 ..     169     183 ..     168     189 .. 0.88
   4 ?   -1.2   0.0       2.7     3e+03      14      33 ..     255     274 ..     253     275 .. 0.79
   5 !    7.3   0.1    0.0051       5.7       4      33 ..     401     430 ..     399     431 .. 0.95
   6 !    7.9   0.1    0.0033       3.7       2      25 ..     433     456 ..     432     465 .. 0.86
   7 !    6.8   0.1    0.0076       8.5       8      31 ..     518     541 ..     518     544 .. 0.89
   8 ?   -0.9   0.0       2.1   2.4e+03      18      33 ..     678     693 ..     677     694 .. 0.82
   9 !    6.4   0.1    0.0097        11       5      30 ..     699     724 ..     695     728 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.028
       TPR_2  5 ynlGlayyklgdyeeAleafekAleldPnn 34
                ++ +l +y+  +y++ l+a e ++e  P++
  EPX72105.1 34 FRTALKCYETRQYKKGLKAIESVIEKHPEH 63
                7889999******************99986 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.0017
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldPnn 34 
                 +++  Gl++ + +dy +A++++  A +l+ +n
  EPX72105.1 100 CWHIYGLVCKADKDYVQAAKCYINAQKLEKGN 131
                 58999*****************9999998765 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 1.3
       TPR_2   4 lynlGlayyklgdye 18 
                 + +l+ a y +g+++
  EPX72105.1 169 WSALAVAQYLRGEFA 183
                 899*********997 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 2.7
       TPR_2  14 lgdyeeAleafekAleldPn 33 
                 l +++eA++ + + l  + +
  EPX72105.1 255 LEKFDEAKATLIRLLDRNSD 274
                 6799***9988888887766 PP

  == domain 5  score: 7.3 bits;  conditional E-value: 0.0051
       TPR_2   4 lynlGlayyklgdyeeAleafekAleldPn 33 
                 +y+l++   +  ++ +A+++   Al++ P+
  EPX72105.1 401 YYYLAQHFDYTRELSQAEHYISLALQHTPT 430
                 9**************************997 PP

  == domain 6  score: 7.9 bits;  conditional E-value: 0.0033
       TPR_2   2 ealynlGlayyklgdyeeAleafe 25 
                 e+++ ++++  ++g+++eA ea++
  EPX72105.1 433 ELYMTQARIFKHQGKLQEAMEAMD 456
                 7899*****************986 PP

  == domain 7  score: 6.8 bits;  conditional E-value: 0.0076
       TPR_2   8 GlayyklgdyeeAleafekAleld 31 
                 +++ y++++y+ Al+ f++++++ 
  EPX72105.1 518 AKSFYRQKKYAMALKRFNAVISIF 541
                 5789**************999886 PP

  == domain 8  score: -0.9 bits;  conditional E-value: 2.1
       TPR_2  18 eeAleafekAleldPn 33 
                 ++A ++++k l+   +
  EPX72105.1 678 QDAQKYMDKLLSVSKE 693
                 89********987665 PP

  == domain 9  score: 6.4 bits;  conditional E-value: 0.0097
       TPR_2   5 ynlGlayyklgdyeeAleafekAlel 30 
                    +++y ++gd e A +++e+A ++
  EPX72105.1 699 LLAAKLYGRQGDSEAANRYLEQASQI 724
                 567999*****************877 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   0.0    0.0012       1.4       8      48 ..      43      83 ..      40      93 .. 0.92
   2 ?    5.6   0.0     0.016        18       9      46 ..     112     149 ..     109     152 .. 0.89
   3 ?   -1.4   0.0       2.4   2.7e+03      21      55 ..     158     192 ..     149     193 .. 0.85
   4 !    7.5   0.1     0.004       4.5      11      54 ..     414     457 ..     410     466 .. 0.89
   5 !    7.1   0.1    0.0055       6.2      13      63 ..     679     729 ..     675     735 .. 0.89

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.0012
       TPR_9  8 eedweralavverllllaPddpeerrdRGlllaqlGclsaA 48
                 +++ + l+++e+++  +P++ e +   G+ll+ lG+++++
  EPX72105.1 43 TRQYKKGLKAIESVIEKHPEHGESIALKGILLHSLGQIKEG 83
                57899********************************9876 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.016
       TPR_9   9 edweralavverllllaPddpeerrdRGlllaqlGcls 46 
                 +d+ +a +++     l     +++rd +ll+ ql +++
  EPX72105.1 112 KDYVQAAKCYINAQKLEKGNTSLLRDLALLQSQLRQFK 149
                 688889999999999999999*************9985 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 2.4
       TPR_9  21 llllaPddpeerrdRGlllaqlGclsaAladLeay 55 
                 ll+ +P   + +   +++++ +G ++   + L+a+
  EPX72105.1 158 LLQANPGVRGNWSALAVAQYLRGEFASSFKILDAF 192
                 788888888999999*********99988877776 PP

  == domain 4  score: 7.5 bits;  conditional E-value: 0.004
       TPR_9  11 weralavverllllaPddpeerrdRGlllaqlGclsaAladLea 54 
                  ++a  ++ + l+  P  +e+++  +++  ++G l++A+++++ 
  EPX72105.1 414 LSQAEHYISLALQHTPTLVELYMTQARIFKHQGKLQEAMEAMDF 457
                 6789999********************************99875 PP

  == domain 5  score: 7.1 bits;  conditional E-value: 0.0055
       TPR_9  13 ralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapdap 63 
                  a ++ + ll +  + p  ++  + l+ ++G+ +aA + Le++ ++ ++++
  EPX72105.1 679 DAQKYMDKLLSVSKENPTTLLLAAKLYGRQGDSEAANRYLEQASQILDQNH 729
                 57789999**********************************998776655 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0     0.024        27       5      43 ..      44      82 ..      41      86 .. 0.92
   2 ?    6.5   0.5     0.011        12       4      42 ..     111     149 ..     110     150 .. 0.94
   3 ?   -1.1   0.0       2.6   2.9e+03      18      49 ..     159     190 ..     155     191 .. 0.77
   4 !   13.1   0.2   9.4e-05      0.11      36      66 ..     253     284 ..     224     286 .. 0.86
   5 ?    3.8   0.1     0.076        85       9      49 ..     416     456 ..     411     468 .. 0.82
   6 ?   -1.6   0.0       3.6   4.1e+03       2      19 ..     522     539 ..     521     546 .. 0.82
   7 !   13.3   1.3   8.3e-05     0.093       7      53 ..     677     723 ..     677     736 .. 0.90

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.024
      TPR_19  5 gdyaeAlalleqalqedpknaearllLAeallalgqlde 43
                 +y   l++ e+++++ p+++e  +l  ++l +lgq++e
  EPX72105.1 44 RQYKKGLKAIESVIEKHPEHGESIALKGILLHSLGQIKE 82
                68899999****************************998 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.011
      TPR_19   4 egdyaeAlalleqalqedpknaearllLAeallalgqld 42 
                 ++dy +A++ + +a + + +n  ++ +LA ++ +l q++
  EPX72105.1 111 DKDYVQAAKCYINAQKLEKGNTSLLRDLALLQSQLRQFK 149
                 78*********************************9985 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 2.6
      TPR_19  18 lqedpknaearllLAeallalgqldeAealLd 49 
                 lq++p+    + +LA a++  g+++   ++Ld
  EPX72105.1 159 LQANPGVRGNWSALAVAQYLRGEFASSFKILD 190
                 77788866667789******999987666665 PP

  == domain 4  score: 13.1 bits;  conditional E-value: 9.4e-05
      TPR_19  36 lalgqldeAealLdalpeedpdd.aryasLlA 66 
                 l l  +deA+a+L +l++ + d+  +y++L++
  EPX72105.1 253 LTLEKFDEAKATLIRLLDRNSDNhDYYHKLQQ 284
                 56789*****************87****9986 PP

  == domain 5  score: 3.8 bits;  conditional E-value: 0.076
      TPR_19   9 eAlalleqalqedpknaearllLAeallalgqldeAealLd 49 
                 +A  + + alq+ p   e+ +  A++   +g l+eA++++d
  EPX72105.1 416 QAEHYISLALQHTPTLVELYMTQARIFKHQGKLQEAMEAMD 456
                 56666666889999999999999**************9987 PP

  == domain 6  score: -1.6 bits;  conditional E-value: 3.6
      TPR_19   2 laegdyaeAlalleqalq 19 
                 + +++ya Al+++ ++++
  EPX72105.1 522 YRQKKYAMALKRFNAVIS 539
                 56899******9998765 PP

  == domain 7  score: 13.3 bits;  conditional E-value: 8.3e-05
      TPR_19   7 yaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpe 53 
                 +++A++++ ++l+ + +n+  +ll A+++  +g+ ++A + L+++ +
  EPX72105.1 677 LQDAQKYMDKLLSVSKENPTTLLLAAKLYGRQGDSEAANRYLEQASQ 723
                 589************************************99999866 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0     0.014        15       5      30 ..      56      81 ..      52      83 .. 0.90
   2 ?   -0.3   0.1       1.6   1.8e+03       1      28 [.     120     147 ..     120     149 .. 0.87
   3 ?   -0.7   0.1       2.2   2.5e+03       4      19 ..     267     282 ..     264     282 .. 0.88
   4 !   10.4   0.0   0.00061      0.68       5      32 ..     424     451 ..     423     453 .. 0.95
   5 ?    3.8   0.1     0.081        91       3      32 ..     685     714 ..     683     716 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.014
      TPR_17  5 aleldPnnadaynnLAelllknGdlm 30
                ++e++P + ++  +++ ll+++G+ +
  EPX72105.1 56 VIEKHPEHGESIALKGILLHSLGQIK 81
                79*********************976 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 1.6
      TPR_17   1 lylkaleldPnnadaynnLAelllknGd 28 
                 +y +a +l++ n  ++  LA l++++ +
  EPX72105.1 120 CYINAQKLEKGNTSLLRDLALLQSQLRQ 147
                 78999999*************9987766 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 2.2
      TPR_17   4 kaleldPnnadaynnL 19 
                 + l+++ +n d y+ L
  EPX72105.1 267 RLLDRNSDNHDYYHKL 282
                 7899*********987 PP

  == domain 4  score: 10.4 bits;  conditional E-value: 0.00061
      TPR_17   5 aleldPnnadaynnLAelllknGdlmtA 32 
                 al++ P+ +++y   A++++++G+l++A
  EPX72105.1 424 ALQHTPTLVELYMTQARIFKHQGKLQEA 451
                 799***********************99 PP

  == domain 5  score: 3.8 bits;  conditional E-value: 0.081
      TPR_17   3 lkaleldPnnadaynnLAelllknGdlmtA 32 
                  k l   + n+  + + A+l+ ++Gd++ A
  EPX72105.1 685 DKLLSVSKENPTTLLLAAKLYGRQGDSEAA 714
                 578888999******************987 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0      0.16   1.8e+02       9      52 ..      42      82 ..      41      85 .. 0.85
   2 ?    1.0   0.1      0.61   6.9e+02      11      46 ..     112     144 ..     110     150 .. 0.76
   3 ?   -2.4   0.0         7   7.9e+03      40      52 ..     172     184 ..     168     204 .. 0.63
   4 ?    5.0   0.0     0.035        39       6      36 ..     251     278 ..     248     282 .. 0.86
   5 ?    6.0   0.1     0.017        19       4      57 ..     405     455 ..     402     462 .. 0.83
   6 ?    4.0   0.1     0.072        81       4      24 ..     518     538 ..     515     543 .. 0.89
   7 ?    5.0   1.3     0.034        38       2      23 ..     700     721 ..     699     723 .. 0.92

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.16
      TPR_16  9 ragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlae 52
                + ++y + ++a e +++++   P++ e+  l+g ++  +g  +e
  EPX72105.1 42 ETRQYKKGLKAIESVIEKH---PEHGESIALKGILLHSLGQIKE 82
                6689999************...9999998888888888887665 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.61
      TPR_16  11 gdyddAaaaleaalkrdpssPdaaeAllllgdaalr 46 
                 +dy +Aa+ +  a k+      +   l  l+++  +
  EPX72105.1 112 KDYVQAAKCYINAQKLE---KGNTSLLRDLALLQSQ 144
                 799***********999...6666666666666655 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 7
      TPR_16  40 lgdaalrqgrlae 52 
                 l++a + +g++a 
  EPX72105.1 172 LAVAQYLRGEFAS 184
                 4444444444443 PP

  == domain 4  score: 5.0 bits;  conditional E-value: 0.035
      TPR_16   6 aalragdyddAaaaleaalkrdpssPdaaeA 36 
                 + l + ++d+A a l ++l+r+   +d+++ 
  EPX72105.1 251 YELTLEKFDEAKATLIRLLDRN---SDNHDY 278
                 567889****************...887776 PP

  == domain 5  score: 6.0 bits;  conditional E-value: 0.017
      TPR_16   4 araalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaaly 57 
                 a+ + + ++  +A+++   al      P  +e ++  ++++ +qg l+eA ++ 
  EPX72105.1 405 AQHFDYTRELSQAEHYISLALQHT---PTLVELYMTQARIFKHQGKLQEAMEAM 455
                 556666677888999998888888...99999******************9765 PP

  == domain 6  score: 4.0 bits;  conditional E-value: 0.072
      TPR_16   4 araalragdyddAaaaleaal 24 
                 a++++r+++y+ A+++++a++
  EPX72105.1 518 AKSFYRQKKYAMALKRFNAVI 538
                 889**************9987 PP

  == domain 7  score: 5.0 bits;  conditional E-value: 0.034
      TPR_16   2 alaraalragdyddAaaaleaa 23 
                  +a+++ r+gd ++A ++le+a
  EPX72105.1 700 LAAKLYGRQGDSEAANRYLEQA 721
                 689****************998 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0      0.38   4.3e+02      13      34 ..      42      63 ..      34      91 .. 0.89
   2 ?    0.7   0.0       1.2   1.3e+03       4      42 ..     101     139 ..      99     142 .. 0.87
   3 ?    0.8   0.2       1.1   1.2e+03       3      42 ..     134     173 ..     132     175 .. 0.87
   4 ?    0.3   0.0       1.5   1.7e+03       4      26 ..     169     191 ..     166     194 .. 0.89
   5 ?    5.0   0.0     0.048        54      10      41 ..     251     282 ..     243     285 .. 0.86
   6 ?    3.4   0.1      0.16   1.8e+02       2      42 ..     399     439 ..     398     441 .. 0.88
   7 ?    5.0   0.1     0.047        52       2      24 ..     433     455 ..     432     467 .. 0.86
   8 ?    0.5   0.0       1.3   1.5e+03       8      32 ..     518     542 ..     511     553 .. 0.74
   9 ?    6.8   0.1     0.013        14       3      30 ..     697     724 ..     678     739 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.38
      TPR_14 13 alGdpdeAiallrralalaPdd 34
                + +++++ +++ + +++++P++
  EPX72105.1 42 ETRQYKKGLKAIESVIEKHPEH 63
                67899***************97 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 1.2
      TPR_14   4 llalaeallalGdpdeAiallrralalaPddaeawllla 42 
                 +  ++ ++ a  d+ +A++++  a +l  ++  +++ la
  EPX72105.1 101 WHIYGLVCKADKDYVQAAKCYINAQKLEKGNTSLLRDLA 139
                 778999999************999999999988888777 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 1.1
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddaeawllla 42 
                 +l++la +  +l++++  ++  + +l+++P+ +  w +la
  EPX72105.1 134 LLRDLALLQSQLRQFKPLADTRNTLLQANPGVRGNWSALA 173
                 67899999********999999999999999888887777 PP

  == domain 4  score: 0.3 bits;  conditional E-value: 1.5
      TPR_14   4 llalaeallalGdpdeAiallrr 26 
                 + ala a + +G+++ + ++l++
  EPX72105.1 169 WSALAVAQYLRGEFASSFKILDA 191
                 8899************9999986 PP

  == domain 5  score: 5.0 bits;  conditional E-value: 0.048
      TPR_14  10 allalGdpdeAiallrralalaPddaeawlll 41 
                 ++l+l+++deA a l r+l+++ d+ +++  l
  EPX72105.1 251 YELTLEKFDEAKATLIRLLDRNSDNHDYYHKL 282
                 567899****************9999887665 PP

  == domain 6  score: 3.4 bits;  conditional E-value: 0.16
      TPR_14   2 eallalaeallalGdpdeAiallrralalaPddaeawllla 42 
                 + ++ la+ +   +++ +A+ +   al++ P+  e+++  a
  EPX72105.1 399 WTYYYLAQHFDYTRELSQAEHYISLALQHTPTLVELYMTQA 439
                 67999**************************9999887555 PP

  == domain 7  score: 5.0 bits;  conditional E-value: 0.047
      TPR_14   2 eallalaeallalGdpdeAiall 24 
                 e+++  a+++ ++G+++eA+++ 
  EPX72105.1 433 ELYMTQARIFKHQGKLQEAMEAM 455
                 789999**************986 PP

  == domain 8  score: 0.5 bits;  conditional E-value: 1.3
      TPR_14   8 aeallalGdpdeAiallrralalaP 32 
                 a+ ++++ +++ A++ ++++++ + 
  EPX72105.1 518 AKSFYRQKKYAMALKRFNAVISIFE 542
                 4457899999999999999999764 PP

  == domain 9  score: 6.8 bits;  conditional E-value: 0.013
      TPR_14   3 allalaeallalGdpdeAiallrralal 30 
                  ll++a+++ ++Gd ++A ++l++a + 
  EPX72105.1 697 TLLLAAKLYGRQGDSEAANRYLEQASQI 724
                 5788999*****************9875 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.0   0.0     0.009        10       4      32 ..      34      62 ..      32      63 .. 0.86
   2 ?   -0.6   0.0       2.4   2.7e+03       4      18 ..     115     129 ..     114     138 .. 0.74
   3 ?    1.3   0.0      0.59   6.6e+02      14      32 ..     256     274 ..     249     275 .. 0.82
   4 ?    2.6   0.2      0.23   2.6e+02       6      23 ..     438     455 ..     433     460 .. 0.87
   5 ?    3.9   0.1     0.092     1e+02       7      29 ..     518     540 ..     518     541 .. 0.92
   6 !    8.4   0.4    0.0034       3.8       3      26 ..     698     721 ..     696     724 .. 0.92

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.009
                HHHH.HHHHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6  4 ykla.lsyrklgdtdkAlealerlikeYPd 32
                ++ a ++y+   ++ k l+a e++i+++P+
  EPX72105.1 34 FRTAlKCYETR-QYKKGLKAIESVIEKHPE 62
                67776788877.*****************8 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 2.4
                 HHHHHHHHHHHHHHH CS
       TPR_6   4 yklalsyrklgdtdk 18 
                  ++a++y+++++ +k
  EPX72105.1 115 VQAAKCYINAQKLEK 129
                 5789****9657666 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.59
                 HHHHHHHHHHHHHHHH-TT CS
       TPR_6  14 gdtdkAlealerlikeYPd 32 
                  + d+A+++l rl+++  d
  EPX72105.1 256 EKFDEAKATLIRLLDRNSD 274
                 5789**********99766 PP

  == domain 4  score: 2.6 bits;  conditional E-value: 0.23
                 HHHHHHHHHHHHHHHHHH CS
       TPR_6   6 lalsyrklgdtdkAleal 23 
                 +a+ ++ +g+ ++A+ea+
  EPX72105.1 438 QARIFKHQGKLQEAMEAM 455
                 7999999*********98 PP

  == domain 5  score: 3.9 bits;  conditional E-value: 0.092
                 HHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   7 alsyrklgdtdkAlealerlike 29 
                 a+s++++++++ Al+ ++ +i+ 
  EPX72105.1 518 AKSFYRQKKYAMALKRFNAVISI 540
                 789*****************986 PP

  == domain 6  score: 8.4 bits;  conditional E-value: 0.0034
                 HHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   3 lyklalsyrklgdtdkAlealerl 26 
                 l+++a++y ++gd+++A ++le+ 
  EPX72105.1 698 LLLAAKLYGRQGDSEAANRYLEQA 721
                 8999*****************996 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       4.4   4.9e+03       5      19 ..      68      82 ..      65      87 .. 0.81
   2 ?    1.9   0.3      0.29   3.3e+02       4      32 ..     101     129 ..     100     131 .. 0.87
   3 ?    3.2   0.1      0.11   1.3e+02      13      34 .]     254     275 ..     251     275 .. 0.87
   4 !    6.7   0.0    0.0088       9.8       2      24 ..     433     455 ..     432     462 .. 0.93
   5 ?   -2.5   0.1       7.9   8.8e+03      21      26 ..     519     524 ..     515     541 .. 0.54
   6 ?   -0.4   0.0       1.6   1.8e+03      19      34 .]     679     694 ..     677     694 .. 0.85
   7 !   10.2   0.0   0.00065      0.73       4      29 ..     698     723 ..     695     724 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 4.4
                HHHHHHHHHTT-HHH CS
       TPR_8  5 ynlgsiylklgdyee 19
                 ++g ++++lg+++e
  EPX72105.1 68 ALKGILLHSLGQIKE 82
                678999999999987 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.29
                 HHHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   4 yynlgsiylklgdyeeAkeyyekaleldp 32 
                 ++  g++++  +dy +A ++y  a +l++
  EPX72105.1 101 WHIYGLVCKADKDYVQAAKCYINAQKLEK 129
                 88899999999999999999999999876 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.11
                 HTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8  13 klgdyeeAkeyyekaleldpdn 34 
                 +l++++eAk+++ + l+ + dn
  EPX72105.1 254 TLEKFDEAKATLIRLLDRNSDN 275
                 799**********999998875 PP

  == domain 4  score: 6.7 bits;  conditional E-value: 0.0088
                 CHHHHHHHHHHHTT-HHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyy 24 
                 e+y+  ++i + +g+++eA+e++
  EPX72105.1 433 ELYMTQARIFKHQGKLQEAMEAM 455
                 789******************97 PP

  == domain 5  score: -2.5 bits;  conditional E-value: 7.9
                 HHHHHH CS
       TPR_8  21 keyyek 26 
                 k++y++
  EPX72105.1 519 KSFYRQ 524
                 444443 PP

  == domain 6  score: -0.4 bits;  conditional E-value: 1.6
                 HHHHHHHHHHHHHHH. CS
       TPR_8  19 eAkeyyekaleldpdn 34 
                  A++y+ k l+ +++n
  EPX72105.1 679 DAQKYMDKLLSVSKEN 694
                 699********99875 PP

  == domain 7  score: 10.2 bits;  conditional E-value: 0.00065
                 HHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_8   4 yynlgsiylklgdyeeAkeyyekale 29 
                 +++ +++y  +gd e+A  y+e+a +
  EPX72105.1 698 LLLAAKLYGRQGDSEAANRYLEQASQ 723
                 67889******************976 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.2   0.0    0.0053       5.9      22      77 ..      27      85 ..      21      90 .. 0.85
   2 ?    1.0   0.2      0.45   5.1e+02      55      79 ..     110     134 ..      92     136 .. 0.74
   3 ?    0.9   0.0      0.49   5.5e+02      28      49 ..     171     192 ..     157     200 .. 0.84
   4 ?   -1.8   0.1       3.4   3.8e+03      34      79 ..     219     265 ..     204     268 .. 0.59
   5 ?    0.4   1.0       0.7   7.9e+02       6      49 ..     415     458 ..     402     481 .. 0.74
   6 ?    1.9   0.2      0.24   2.7e+02      28      44 ..     514     532 ..     508     539 .. 0.81
   7 !   13.4   0.3   5.9e-05     0.066       5      57 ..     677     730 ..     674     740 .. 0.89

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0053
                -HHHHHHH..HHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHH CS
      ANAPC3 22 spedayll..AlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAia 77
                sp+d+  +  Al  y++ qyk+ ++ +++  ++ +++ ++  l++  l  L++++e++ 
  EPX72105.1 27 SPKDITQFrtALKCYETRQYKKGLKAIESViEKHPEHGESIALKGILLHSLGQIKEGYE 85
                56665554449999****************9999999999999999999*******986 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.45
                 -HHHHHHHHHHHHHTT-HHHHHHHH CS
      ANAPC3  55 slgcrylfAqcllkLkkyeeAiaaL 79 
                   +  + +A+c++  +k+e++ + L
  EPX72105.1 110 ADKDYVQAAKCYINAQKLEKGNTSL 134
                 4555667889999999988887766 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.49
                 HHHHHHHHTT-HHHHHHHHHCT CS
      ANAPC3  28 llAlclylngqykrAyellrka 49 
                 +lA + yl+g++ + +++l+ +
  EPX72105.1 171 ALAVAQYLRGEFASSFKILDAF 192
                 6899**************9987 PP

  == domain 4  score: -1.8 bits;  conditional E-value: 3.4
                 HHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH CS
      ANAPC3  34 ylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaL 79 
                 ++      Aye l +  k+     + + ++    l L+k++eA a+L
  EPX72105.1 219 LKKDGTAAAYEHLLSEeKKILDLTAFLEIKVGYELTLEKFDEAKATL 265
                 55555566666666663333333355555555567789999998887 PP

  == domain 5  score: 0.4 bits;  conditional E-value: 0.7
                 HHHHHHHHHHH.HHH--HHHHHHH.HHHHHHTT-HHHHHHHHHCT CS
      ANAPC3   6 knAiflaerllaaetespedayll.AlclylngqykrAyellrka 49 
                   A+ +++++l ++t  +  +y+  A  + ++g+ ++A+e  + a
  EPX72105.1 415 SQAEHYISLAL-QHTPTLVELYMTqARIFKHQGKLQEAMEAMDFA 458
                 56777888888.777777777775599999999988888876655 PP

  == domain 6  score: 1.9 bits;  conditional E-value: 0.24
                 HH..HHHHHHTT-HHHHHH CS
      ANAPC3  28 ll..AlclylngqykrAye 44 
                 +l  A+++y++++y  A++
  EPX72105.1 514 MLedAKSFYRQKKYAMALK 532
                 446799*********9987 PP

  == domain 7  score: 13.4 bits;  conditional E-value: 5.9e-05
                 HHHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HH CS
      ANAPC3   5 yknAiflaerllaaetespedayllAlclylngqykrAyellrka.klnskslg 57 
                 +++A  + ++ll+ ++e+p  ++l A+ + ++g+ + A ++l++a ++ +++++
  EPX72105.1 677 LQDAQKYMDKLLSVSKENPTTLLLAAKLYGRQGDSEAANRYLEQAsQILDQNHA 730
                 689*********999******************************888777765 PP

>> TPR_MalT  MalT-like TPR region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0       0.2   2.3e+02     171     273 ..     176     275 ..     170     284 .. 0.64
   2 !    8.9   0.5   0.00075      0.84      63     190 ..     414     461 ..     382     485 .. 0.54
   3 !    6.6   0.1    0.0038       4.3     165     199 ..     699     733 ..     676     740 .. 0.78

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.2
    TPR_MalT 171 alaqGdleeAetllekaeelaresnfhvdwlanaeevr...vrlwlaqgdlaaaerwleaaelpsdddnhflelelrnlarvllalgrydeAlellerL 266
                 ++ +G+   + ++l+  e +   + ++vd ++++e+     ++  l +  +aaa + l ++e++  d + fle      +  +l l ++deA+++l rL
  EPX72105.1 176 QYLRGEFASSFKILDAFETTIS-QGIPVDPQEESESQLfinLV-ILKKDGTAAAYEHLLSEEKKILDLTAFLE----IKVGYELTLEKFDEAKATLIRL 268
                 5556666666666666666554.44555555555444331133.34444566666666677778899999988....4567799999*********999 PP

    TPR_MalT 267 lkaaeel 273
                 l++  + 
  EPX72105.1 269 LDRNSDN 275
                 9987665 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00075
    TPR_MalT  63 lqeaek.larqadslhvallallqqaeilvaqGrLheAletyeqalqlateqglqqlplvgfllvlladllyEwndLeeAeqhlqeGielleqlepeaa 160
                 l++ae+ ++++ +++++ +  ++ qa i  +qG+L+eA+e                                                           
  EPX72105.1 414 LSQAEHyISLALQHTPTLVELYMTQARIFKHQGKLQEAME----------------------------------------------------------- 453
                 3333321334444444444444455555555555555555........................................................... PP

    TPR_MalT 161 ldayvllarialaqGdleeAetllekaeel 190
                                       +++ a +l
  EPX72105.1 454 ----------------------AMDFARKL 461
                 ......................55444444 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.0038
    TPR_MalT 165 vllarialaqGdleeAetllekaeelaresnfhvd 199
                 +l a+++  qGd e+A ++le+a + +++++ +v+
  EPX72105.1 699 LLAAKLYGRQGDSEAANRYLEQASQILDQNHASVI 733
                 55678888999999999999999999999987654 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       3.3   3.7e+03      26      62 ..      46      81 ..      44      82 .. 0.75
   2 ?    1.6   0.1       0.3   3.3e+02       9      56 ..     104     143 ..      99     149 .. 0.67
   3 ?   -0.1   0.1         1   1.2e+03      15      37 ..     254     276 ..     248     285 .. 0.77
   4 ?    1.8   0.4      0.27     3e+02      34      69 ..     389     422 ..     367     430 .. 0.75
   5 ?    0.3   1.4      0.77   8.6e+02      42      64 ..     429     451 ..     397     460 .. 0.54
   6 ?    5.0   0.1     0.027        31      13      36 ..     521     544 ..     515     548 .. 0.81
   7 !   13.8   0.2   4.9e-05     0.055      21      75 ..     679     725 ..     676     727 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 3.3
      TPR_12 26 lekaleiarrllGpdhpltattlrnLgrlyralgrye 62
                ++k l +++++  ++hp+  ++    g+l++ lg+ +
  EPX72105.1 46 YKKGLKAIESVI-EKHPEHGESIALKGILLHSLGQIK 81
                556667776775.579999999999999999998866 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.3
      TPR_12   9 laavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyr 56 
                 +++v+ + ++y +A +++  a  +     G +     + lr+L+ l++
  EPX72105.1 104 YGLVCKADKDYVQAAKCYINAQKLE---KG-N----TSLLRDLALLQS 143
                 7899999999999999999994443...22.2....235555555555 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 1
      TPR_12  15 rlgrydeAlellekaleiarrll 37 
                  l+++deA + l + l++ +  +
  EPX72105.1 254 TLEKFDEAKATLIRLLDRNSDNH 276
                 68899999999999999876554 PP

  == domain 4  score: 1.8 bits;  conditional E-value: 0.27
      TPR_12  34 rrllGpdhpltattlrnLgrlyralgryeeAlelle 69 
                 ++++ p+   +++t++ L++ ++++ ++ +A+ +  
  EPX72105.1 389 TEVQIPTT--LLWTYYYLAQHFDYTRELSQAEHYIS 422
                 55555666..89*************9*****99865 PP

  == domain 5  score: 0.3 bits;  conditional E-value: 0.77
      TPR_12  42 pltattlrnLgrlyralgryeeA 64 
                 p +++ + + +r++  +g+++eA
  EPX72105.1 429 PTLVELYMTQARIFKHQGKLQEA 451
                 33444455555555555555555 PP

  == domain 6  score: 5.0 bits;  conditional E-value: 0.027
      TPR_12  13 lrrlgrydeAlellekaleiarrl 36 
                  +r+++y+ Al+ +++++ i++++
  EPX72105.1 521 FYRQKKYAMALKRFNAVISIFEAW 544
                 678999999999999999999887 PP

  == domain 7  score: 13.8 bits;  conditional E-value: 4.9e-05
      TPR_12  21 eAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealaia 75 
                 +A+++ +k l + +     ++    ttl   + ly ++g+ e+A ++le+a +i+
  EPX72105.1 679 DAQKYMDKLLSVSK-----EN---PTTLLLAAKLYGRQGDSEAANRYLEQASQIL 725
                 56666666666662.....22...25899**********************9987 PP

>> TPR_4  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.1       0.1   1.1e+02       5      18 ..     170     183 ..     169     184 .. 0.91
   2 ?    7.1   0.1    0.0092        10       3      22 ..     697     716 ..     695     720 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.1
       TPR_4   5 laLArallalGdld 18 
                 +aLA a++++G+++
  EPX72105.1 170 SALAVAQYLRGEFA 183
                 69**********97 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0092
       TPR_4   3 allaLArallalGdldeAra 22 
                 +ll+ A ++ ++Gd+++A +
  EPX72105.1 697 TLLLAAKLYGRQGDSEAANR 716
                 7899*************966 PP

>> YicC_N  YicC-like family, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       7.7   8.6e+03      62      97 ..     120     155 ..     118     176 .. 0.76
   2 ?   11.9   0.0    0.0002      0.23      45     113 ..     333     402 ..     324     469 .. 0.83
   3 ?   -2.0   0.4       3.8   4.3e+03     104     104 ..     695     695 ..     619     738 .. 0.41

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 7.7
      YicC_N  62 vsvsleseeeeekalkvneellkaylealkelaeel 97 
                 ++++ ++ e+ +++l  + +ll++ l+++k la++ 
  EPX72105.1 120 CYINAQKLEKGNTSLLRDLALLQSQLRQFKPLADTR 155
                 788888888778888888888888888888776544 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 0.0002
      YicC_N  45 eeirelikerlsRGkvevsvsleseeeeekalkvneellkaylealkelaeelg.aeelslaellrlpgv 113
                 +++ ++++++l+RG  +v+v+++s  e++++ kv e+l++ y++ l++ a+    ++e+++ + l +   
  EPX72105.1 333 QRVDSYLRAKLKRGIPSVFVDIKSLYEDASKCKVVEKLVSDYASCLSDHAKFSTaDTEVQIPTTLLWTYY 402
                 678999******************9999*******************99654444567777777666644 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 3.8
      YicC_N 104 l 104
                  
  EPX72105.1 695 P 695
                 2 PP

>> Fis1_TPR_C  Fis1 C-terminal tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.0    0.0033       3.7       8      41 ..      37      70 ..      34      76 .. 0.87
   2 ?   -1.1   0.0       1.9   2.1e+03       7      27 ..     172     192 ..     171     192 .. 0.92
   3 ?   -2.0   0.0       3.5   3.9e+03      14      35 ..     255     276 ..     253     280 .. 0.87
   4 ?    0.4   0.2      0.61   6.8e+02      14      32 ..     411     429 ..     401     431 .. 0.82
   5 ?    2.6   0.0      0.13   1.4e+02      12      30 ..     522     540 ..     517     545 .. 0.88
   6 ?    1.4   0.1      0.31   3.5e+02      19      38 ..     679     698 ..     677     704 .. 0.81

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0033
                HHHHHHHT-HHHHHHHHHHHHHHTTS-HHHHHHH CS
  Fis1_TPR_C  8 AlGhyklgeYseArryvdalLeiEPenrQaqsLk 41
                Al +y  ++Y++ ++ ++ ++e++Pe     +Lk
  EPX72105.1 37 ALKCYETRQYKKGLKAIESVIEKHPEHGESIALK 70
                6779999******************988887777 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 1.9
                 HHHHHHHHT-HHHHHHHHHHH CS
  Fis1_TPR_C   7 lAlGhyklgeYseArryvdal 27 
                 lA+++y  ge+  + + +da+
  EPX72105.1 172 LAVAQYLRGEFASSFKILDAF 192
                 8*************9999986 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 3.5
                 HT-HHHHHHHHHHHHHHTTS-H CS
  Fis1_TPR_C  14 lgeYseArryvdalLeiEPenr 35 
                 l +++eA+  + +lL    +n+
  EPX72105.1 255 LEKFDEAKATLIRLLDRNSDNH 276
                 67899**********9988887 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.61
                 HT-HHHHHHHHHHHHHHTT CS
  Fis1_TPR_C  14 lgeYseArryvdalLeiEP 32 
                  +e s+A  y+   L++ P
  EPX72105.1 411 TRELSQAEHYISLALQHTP 429
                 57999***********998 PP

  == domain 5  score: 2.6 bits;  conditional E-value: 0.13
                 HHHT-HHHHHHHHHHHHHH CS
  Fis1_TPR_C  12 yklgeYseArryvdalLei 30 
                 y++++Y +A++  +a+++i
  EPX72105.1 522 YRQKKYAMALKRFNAVISI 540
                 9**********99998765 PP

  == domain 6  score: 1.4 bits;  conditional E-value: 0.31
                 HHHHHHHHHHHHTTS-HHHH CS
  Fis1_TPR_C  19 eArryvdalLeiEPenrQaq 38 
                 +A +y+d lL++  en   +
  EPX72105.1 679 DAQKYMDKLLSVSKENPTTL 698
                 799*********99997655 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.1      0.54     6e+02      10      33 ..      39      62 ..      34      63 .. 0.68
   2 ?   -2.3   0.1       4.3   4.8e+03       7      19 ..      70      82 ..      68      85 .. 0.86
   3 ?    6.3   0.6     0.008         9       8      32 ..     105     129 ..     105     131 .. 0.88
   4 ?   -1.9   0.0       3.1   3.5e+03       4      17 ..     169     182 ..     169     184 .. 0.87
   5 ?   -1.5   0.0       2.3   2.6e+03      14      33 ..     255     274 ..     253     275 .. 0.74
   6 ?    4.2   0.1     0.036        40       3      32 ..     400     429 ..     399     431 .. 0.91
   7 ?    4.6   0.0     0.029        32       2      23 ..     433     454 ..     432     462 .. 0.85
   8 ?    2.6   0.1      0.12   1.3e+02       9      28 ..     519     538 ..     517     542 .. 0.78
   9 ?   -1.1   0.3       1.8     2e+03       8      27 ..     702     721 ..     698     727 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.54
                HHHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1 10 ayfklgkydeAleyyekALelnPn 33
                 +++  +y++ l++ e ++e  P+
  EPX72105.1 39 KCYETRQYKKGLKAIESVIEKHPE 62
                456667788888888888877776 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 4.3
                HHHHHHHTT-HHH CS
       TPR_1  7 lGnayfklgkyde 19
                +G ++++lg+ +e
  EPX72105.1 70 KGILLHSLGQIKE 82
                7999*****9887 PP

  == domain 3  score: 6.3 bits;  conditional E-value: 0.008
                 HHHHHHTT-HHHHHHHHHHHHHHST CS
       TPR_1   8 GnayfklgkydeAleyyekALelnP 32 
                 G+++   ++y +A ++y  A +l+ 
  EPX72105.1 105 GLVCKADKDYVQAAKCYINAQKLEK 129
                 7888899*************99975 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 3.1
                 HHHHHHHHHHTT-H CS
       TPR_1   4 lynlGnayfklgky 17 
                 +  l++a +  g++
  EPX72105.1 169 WSALAVAQYLRGEF 182
                 78899****99998 PP

  == domain 5  score: -1.5 bits;  conditional E-value: 2.3
                 TT-HHHHHHHHHHHHHHSTT CS
       TPR_1  14 lgkydeAleyyekALelnPn 33 
                 l+k+deA +   + L  n +
  EPX72105.1 255 LEKFDEAKATLIRLLDRNSD 274
                 799****9877766666665 PP

  == domain 6  score: 4.2 bits;  conditional E-value: 0.036
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHST CS
       TPR_1   3 alynlGnayfklgkydeAleyyekALelnP 32 
                 ++y l++ + +  ++ +A+ y + AL++ P
  EPX72105.1 400 TYYYLAQHFDYTRELSQAEHYISLALQHTP 429
                 79************************9866 PP

  == domain 7  score: 4.6 bits;  conditional E-value: 0.029
                 HHHHHHHHHHHHTT-HHHHHHH CS
       TPR_1   2 kalynlGnayfklgkydeAley 23 
                 + +   + ++ ++gk++eA e+
  EPX72105.1 433 ELYMTQARIFKHQGKLQEAMEA 454
                 567788999**********997 PP

  == domain 8  score: 2.6 bits;  conditional E-value: 0.12
                 HHHHHTT-HHHHHHHHHHHH CS
       TPR_1   9 nayfklgkydeAleyyekAL 28 
                   +++++ky  Al+ ++ ++
  EPX72105.1 519 KSFYRQKKYAMALKRFNAVI 538
                 5799*********8665555 PP

  == domain 9  score: -1.1 bits;  conditional E-value: 1.8
                 HHHHHHTT-HHHHHHHHHHH CS
       TPR_1   8 GnayfklgkydeAleyyekA 27 
                 + +y ++g+ + A  y e+A
  EPX72105.1 702 AKLYGRQGDSEAANRYLEQA 721
                 568999****9998888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (744 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1295  (0.0722293); expected 358.6 (0.02)
Passed bias filter:                      585  (0.0326287); expected 358.6 (0.02)
Passed Vit filter:                        89  (0.00496402); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.74u 0.32s 00:00:01.06 Elapsed: 00:00:00.48
# Mc/sec: 4642.78
//
Query:       EPX72106.1  [L=297]
Description: CtIP-like endonuclease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    9.9e-09   36.3   4.4      9e-07   30.0   0.1    3.4  2  SAE2          DNA repair protein endonuclease SAE2/CtIP C-ter
  ------ inclusion threshold ------
      0.016   15.5   1.9      0.035   14.4   1.9    1.6  1  Lzipper-MIP1  Leucine-zipper of ternary complex factor MIP1


Domain annotation for each model (and alignments):
>> SAE2  DNA repair protein endonuclease SAE2/CtIP C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.8      0.21   1.8e+03      28      28 ..      74      74 ..      14     171 .. 0.63
   2 !   30.0   0.1     1e-10     9e-07       1     109 [.     211     295 ..     211     297 .] 0.73

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.21
        SAE2 28 f 28
                f
  EPX72106.1 74 F 74
                2 PP

  == domain 2  score: 30.0 bits;  conditional E-value: 1e-10
        SAE2   1 aFdevvrgkderkclpgCtkpeCcgkkfravaelearkeeptaskeeedkklleeklgdeayklakmsseerqeleieakkkklankfgrHRhaferak 99 
                 +Fd+vvrgk +rk lp+ ++p+C +k+++ +++++    + +     +d                  ++++ ++l      + l +k+grHR     +k
  EPX72106.1 211 EFDDVVRGK-KRKLLPAFDCPDC-QKFYKLHGPIKDTGIALA----WND------------------ENRKPNSLPHSCPHNTLVQKVGRHRRVVPPKK 285
                 59******5.5999***666666.999999998886322221....111..................122344455555677799************** PP

        SAE2 100 sPpgFWeidF 109
                  P+gFWe+dF
  EPX72106.1 286 IPDGFWESDF 295
                 ********** PP

>> Lzipper-MIP1  Leucine-zipper of ternary complex factor MIP1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   1.9   3.9e-06     0.035       8      54 ..      25      71 ..      20      92 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 3.9e-06
  Lzipper-MIP1  8 sLeqeveqLqerLqeeeklrraLekalssssdgsllslstllpkkak 54
                   Le+e +qL+++L  e+++r  Le+ l+++ + +   +st +p+k k
    EPX72106.1 25 RLEEENLQLKTELTYEKSMRLQLEQELANERSLKKTLPSTNSPRKSK 71
                  799************************65555555666667787766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (297 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       880  (0.0490825); expected 358.6 (0.02)
Passed bias filter:                      497  (0.0277205); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 2061.56
//
Query:       EPX72107.1  [L=185]
Description: cytochrome c oxidase subunit V [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-41  140.8   0.1    3.5e-41  140.4   0.1    1.1  1  COX4      Cytochrome c oxidase subunit IV


Domain annotation for each model (and alignments):
>> COX4  Cytochrome c oxidase subunit IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.4   0.1     2e-45   3.5e-41       3     135 ..      42     172 ..      40     174 .. 0.96

  Alignments for each domain:
  == domain 1  score: 140.4 bits;  conditional E-value: 2e-45
        COX4   3 ansnptyvd...rwenplpdirfreqseeikaLkekekgdWkeLsleEkkalyrisFgqtlpemkaptkewkkvlggvlillglslllfllirlfvagp 98 
                 ++++p++vd   rw+ +++    +e++ +i+ L +++k +W++Ls eEk+a+y+i+Fg+++p++   + ++k+v++g++++l +++++f+lir+  a+p
  EPX72107.1  42 MIARPRLVDleqRWDIMPQ----EEKDTLITDLYARQKLPWTDLSVEEKRAAYWIAFGEHGPRAY-SHINQKTVFWGTAAGLIIAVAMFALIRTQ-AAP 134
                 689****************....***************************************994.4449*************************.*** PP

        COX4  99 vpkTlskewqeaqlermldlkinpitGlssk.wdyekk 135
                 +p+Tl++ewqe+++e+m+++kinpi+G +s+ ++++++
  EPX72107.1 135 APHTLTREWQEKSNEYMKENKINPISGEASEgFTGRGQ 172
                 **********************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       536  (0.0298957); expected 358.6 (0.02)
Passed bias filter:                      452  (0.0252106); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.22s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1346.88
//
Query:       EPX72108.1  [L=300]
Description: methyltransferase Rrg1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.3e-18   66.6   0.0    3.5e-18   65.9   0.0    1.3  1  Methyltransf_16  Lysine methyltransferase
     0.0018   18.2   0.0     0.0055   16.6   0.0    1.7  1  Methyltransf_23  Methyltransferase domain
     0.0088   15.8   0.0      0.014   15.2   0.0    1.2  1  PCMT             Protein-L-isoaspartate(D-aspartate) O-methyl
  ------ inclusion threshold ------
      0.015   15.1   0.0      0.039   13.7   0.0    1.7  1  Methyltransf_31  Methyltransferase domain
      0.063   14.0   0.0       0.12   13.1   0.0    1.6  1  Methyltransf_25  Methyltransferase domain
       0.11   12.0   0.0       0.62    9.6   0.0    2.0  2  MTS              Methyltransferase small domain


Domain annotation for each model (and alignments):
>> Methyltransf_16  Lysine methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.9   0.0   1.2e-21   3.5e-18      15     161 ..     105     250 ..      90     265 .. 0.81

  Alignments for each domain:
  == domain 1  score: 65.9 bits;  conditional E-value: 1.2e-21
  Methyltransf_16  15 esigrkvWdaavvlvkylekklakelganelsklsvlELGsGtGlvGlavaellpeakviltDleellellkknielnkn...alkskvkvevL 105
                      +  g k W +a +l+ +l +       ++    +++lELGsGtGl G+++a++  + +++ tDl+e+++++++n+  n++    ++ +v+ +vL
       EPX72108.1 105 DTLGFKTWGSAPLLSAHLPEW------ETPDPSIRALELGSGTGLLGISAAHQ-LGWQMVCTDLPEIVKNMEHNVLENESlvqENSGSVECHVL 191
                      377888999999999998884......34456799***************999.789999***************9999866677889****** PP

  Methyltransf_16 106 dWgeeleedlle...keevDlilaaDcvYledslelLvkvLkellkkeskvlvaykkrr 161
                      dW+++   d      +++++ ++a+DcvY  +   l +++  + l+k++ v+  y  r+
       EPX72108.1 192 DWMNPPSTDHPPawlERPFERVIASDCVYETNFGRLAIALFLKYLAKDGIVITEYPLRH 250
                      ***977666543222689***********999888888998999999988888887776 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.8e-06    0.0055      20     126 ..     128     253 ..     112     278 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.8e-06
  Methyltransf_23  20 lraggrvLdiGcGtGillevlren.gfsvtgvDlspeaveiaekakkaqkdqfdeqeaaepqg........................kfdlIvl 88 
                       +++ r L++G GtG l  +++ + g++++  Dl ++  ++       +++ ++e+  +e++g                         f+ +++
       EPX72108.1 128 PDPSIRALELGSGTGLLGISAAHQlGWQMVCTDLPEIVKNME------HNVLENESLVQENSGsvechvldwmnppstdhppawlerPFERVIA 215
                      677889*********8877776665*********77655543......333344444445555666666666666667777778888******* PP

  Methyltransf_23  89 revlehvpdppellrqiatllkpgGylllseplaslke 126
                      +++ +       +++ + ++l+ +G ++ ++pl+  + 
       EPX72108.1 216 SDCVYETNFGRLAIALFLKYLAKDGIVITEYPLRHTHL 253
                      ********************************987743 PP

>> PCMT  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   4.6e-06     0.014      50     119 ..     107     173 ..     100     192 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 4.6e-06
                 EETTEEE--HHHHHHHHHHTT--TT-EEEEES-TTSHHHHHHHHHHCTTCEEEEEESBHHHHHHHHHHHH CS
        PCMT  50 igynatiSaphmvalalellelkkgarvLevGsGsGyltavlarlvgekgrvvsierikelveeakrnlk 119
                 +g+++  Sap + a + e+ + ++  r+Le+GsG+G l    a+ +g ++  v     +e+v++ ++n+ 
  EPX72108.1 107 LGFKTWGSAPLLSAHLPEWETPDPSIRALELGSGTGLLGISAAHQLGWQM--V-CTDLPEIVKNMEHNVL 173
                 5677788*******************************999999988877..3.3456777777777664 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   1.3e-05     0.039       3     118 ..     130     253 ..     128     283 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.3e-05
  Methyltransf_31   3 kglrvlDlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaqklgldnveFeqgdieeleklled...............ekfDlilsn 81 
                        +r l+lG+GtG l++ +a++lg   ++v  D  +e ++ ++ n     l+n ++ q++  + e+++ d               ++f  +++ 
       EPX72108.1 130 PSIRALELGSGTGLLGISAAHQLG--WQMVCTDL-PEIVKNMEHN----VLENESLVQENSGSVECHVLDwmnppstdhppawleRPFERVIAS 216
                      56889***************8876..46777775.5666666663....444444444444444444222344444447779999********* PP

  Methyltransf_31  82 evlnaladpdkileeiervlkpggilliedprllael 118
                      + ++ +++   ++    ++l ++gi+++e+p  ++ l
       EPX72108.1 217 DCVYETNFGRLAIALFLKYLAKDGIVITEYPLRHTHL 253
                      *****************************99833333 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   4.1e-05      0.12       2      60 ..     135     198 ..     134     240 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 4.1e-05
                      EEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTT.......TEEEEESBCCGBSS CS
  Methyltransf_25   2 LdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeegl.......nvefvqgdaedlpf 60 
                      L+lG GtG l + +a++lg  +++++D+ +e ++++++++ e++        +ve+++ d  + p 
       EPX72108.1 135 LELGSGTGLLGISAAHQLG-WQMVCTDL-PEIVKNMEHNVLENESlvqensgSVECHVLDWMNPPS 198
                      9*****************8.*******9.6677777766655333244445688888888876653 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.1      0.23   6.9e+02     103     113 ..       8      18 ..       3      24 .. 0.78
   2 ?    9.6   0.0   0.00021      0.62      22      63 ..     117     161 ..     112     201 .. 0.67

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.23
                 E---STTTCHC CS
         MTS 103 sNPPfhagkat 113
                  NPPf++ ka+
  EPX72108.1   8 ANPPFQQIKAV 18 
                 7*****98885 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00021
                 HHHHHCHCC....TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEES CS
         MTS  22 lLletlpke....lsgkvlDlGcGaGvlgaalakespeaevtlvdv 63 
                 lL  +lp+      s ++l lG+G+G+lg+++a++    +++++d 
  EPX72108.1 117 LLSAHLPEWetpdPSIRALELGSGTGLLGISAAHQLGW-QMVCTDL 161
                 455566665555566789**************998766.5666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (300 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       385  (0.0214736); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.47
# Mc/sec: 1922.12
//
Query:       EPX72109.1  [L=74]
Description: subtilisin cleaved region like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.9e-09   38.0   0.4    8.3e-09   36.0   0.4    1.7  1  Inhibitor_I9  Peptidase inhibitor I9
  ------ inclusion threshold ------
      0.063   13.1   0.1      0.087   12.7   0.1    1.3  1  PASTA         PASTA domain


Domain annotation for each model (and alignments):
>> Inhibitor_I9  Peptidase inhibitor I9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.0   0.4   9.3e-13   8.3e-09      16      82 .]       4      71 ..       2      71 .. 0.85

  Alignments for each domain:
  == domain 1  score: 36.0 bits;  conditional E-value: 9.3e-13
                  HHHHHHHHH....HHHHTT...--EEEEEEESSSSSEEEEEE-GGGHHHHHTSTTEEEEEEEEEEEE- CS
  Inhibitor_I9 16 assheswhqsllksvlkge.dsakagilysYkilfnGfavklteeqaeklrkrpeVesVepDqsvrla 82
                  +s+++++ +++  + +k e + +  ++ + Y+++f+Gf+v+l e+++ +l ++peV + e D++++++
    EPX72109.1  4 KSYIVQLKDNTDVNKAKAElEASGVKVGHVYDTVFKGFSVTLPENSVNTLDAHPEVQHYEADKELHTM 71
                  5666777776656656666778899**************************************99985 PP

>> PASTA  PASTA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   9.8e-06     0.087      10      40 ..      15      50 ..       8      52 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 9.8e-06
                BHHHHHHHHHHTT--CCCEEE.....ECTCCGTTBE CS
       PASTA 10 svdeAkatLkalGlkiktvee.....tsddvpeGtV 40
                +v  Aka+L+a+G+k++ v+      +s++ pe++V
  EPX72109.1 15 DVNKAKAELEASGVKVGHVYDtvfkgFSVTLPENSV 50
                7889**********9999999999999999999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       520  (0.0290033); expected 358.6 (0.02)
Passed bias filter:                      333  (0.0185733); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.28s 00:00:00.69 Elapsed: 00:00:00.45
# Mc/sec: 497.68
//
Query:       EPX72110.1  [L=739]
Description: transport complex subunit Cog4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-80  270.7   2.8      3e-80  269.8   2.8    1.5  1  COG4      COG4 transport protein


Domain annotation for each model (and alignments):
>> COG4  COG4 transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  269.8   2.8   1.7e-84     3e-80       1     318 [.     164     463 ..     164     481 .. 0.93

  Alignments for each domain:
  == domain 1  score: 269.8 bits;  conditional E-value: 1.7e-84
        COG4   1 LekaresLlelfleeFekAakenDkaeitrffkLFpligreeeGLdlYskyvceivaerarkelkseqskkdaetkagvfyanlltkLfeaiaqiveqh 99 
                 L+++ esL+ lf++eFekAa+++D++eitr+fkLFplig+e+eGL++Y+++   i+a++ar++l++  s       +++f+++++t+L+e++a+iv  h
  EPX72110.1 164 LNEVVESLHALFQREFEKAARDKDQKEITRYFKLFPLIGKEKEGLEAYWHFFGGIIASKARATLDEPPS-------HSFFFSQAFTGLVEHVASIVRAH 255
                 577889************************************************************965.......9********************** PP

        COG4 100 qplvekyYgegkmlkvierLqkecDrqagiildtfeeerqldrllsdvksykfsflvrgqfpaksseaaaasaktsnesseeeegvdpreidalleEis 198
                 +plv +yY +++ ++vie+Lq  cDrq+++i++t+++ r+++ ll+++ksyk+              +a+ ++++  +++ e e+++++ +++ll+E++
  EPX72110.1 256 TPLVLRYYKAKNTITVIENLQFDCDRQGSLIISTMYDIRRISSLLHSIKSYKY-----------LLLNAKIKHRNLPSDQREMERLSLQVLHPLLNEVT 343
                 *****************************************************...........44566667788899999999*************** PP

        COG4 199 lmlsrwelYsrFlaskl..eeeeeeeeeeeqeeelelpdllrssklskkvsqellssYvpLetfylrrsvekAiqldelpslkassplissvvDDvfyi 295
                 ++l++w++Y+ F+++ +    +++ ++++++e++ e+ ++++ssk+++ +s++l++s  +Let+yl++s+e A++l+e+ +     p++ss+vDDv+y+
  EPX72110.1 344 SILTKWNMYRIFMSRFIhrLLNPDPSVNSNDERSFECAKVFSSSKIQELISDQLIPSLLQLETYYLKHSMETAFELEEHYT--RVFPWSSSIVDDVMYV 440
                 **********999998865456777888999*************************************************9..**************** PP

        COG4 296 lkkvlrralstgsvdvvsavvna 318
                  k+v++r++ +gs + ++++v +
  EPX72110.1 441 TKQVIQRVFFSGSSAYLDKFVHE 463
                 *******************9974 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (739 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       918  (0.051202); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.27s 00:00:00.90 Elapsed: 00:00:00.44
# Mc/sec: 5091.99
//
Query:       EPX72111.1  [L=340]
Description: adenosine kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.3e-71  240.6   0.2    2.8e-71  240.3   0.2    1.0  1  PfkB            pfkB family carbohydrate kinase
  ------ inclusion threshold ------
      0.074   13.5   0.0       0.17   12.3   0.0    1.5  1  DEC-1_C         Dec-1 protein, C terminal region
       0.13   12.2   0.0       0.22   11.4   0.0    1.4  1  PS_pyruv_trans  Polysaccharide pyruvyl transferase


Domain annotation for each model (and alignments):
>> PfkB  pfkB family carbohydrate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  240.3   0.2   4.7e-75   2.8e-71      12     301 ..      33     334 ..      25     335 .. 0.96

  Alignments for each domain:
  == domain 1  score: 240.3 bits;  conditional E-value: 4.7e-75
                 EEEEEECSSHTTSEE.EESEEEEEEESHHHHHHHHHHHTT..-EEEEEEEEESSHHHHHHHHHHHHTTEEETTEEEESSSEEEEEEEEETTT.SEEEEE CS
        PfkB  12 idliavseklegelv.evktveksaGGagaNvAvalarlg..advafigavGdDnfGeflleelkkegvdtdyvkidedtrtglalivvded.gertiv 106
                 +d+i++sek  +  + ++  ++++aGGa++N+++a++++   ++++f g+vG+D+f+++l+e+++k+g+++ + + d+ t tg++++v++++ + r+++
  EPX72111.1  33 NDAILASEK--QMGIyKETCISYGAGGAAQNSCRAAQYVLppNSTVFAGCVGNDDFARMLRESNDKAGLRSLFSV-DPSTTTGVCAVVLSNNnKCRSLC 128
                 889999999..99999*****************************************************996666.*********************** PP

                 EEEGGGGGHHHHHHH..HHHHHHGCTSEEEEESEECTTSHHHHHHHHHHHHHHTTEEEEEECESSSHH.HHHHHHHHHCTESEEEEEHHHHHHHHTSCT CS
        PfkB 107 fnrgaaadltkeele..ededlleeadllyisgllsselpeavleelaeaaknggtfdpnlldplgaq.fkeallellaladllkpneeElealtgekl 202
                 +n+gaa++++ ++l+  e+++l+e+++++y++g + +++pea+le++++a ++++ +++nl++p+ +q fke+++++++++d++++ne+E+    ge++
  EPX72111.1 129 TNLGAANNYKLKDLKapEVWSLVESSKIFYVGGYHLTVSPEAMLELAKHAVEKNKPYIMNLSAPFLSQfFKEQMDSVVPYCDYIIGNESEIL-SYGEHH 226
                 ********************************************************************************************.555555 PP

                 .......HSHHHHHHHHHHHHHTTSSEEEEEEGGGEEEEEE..TTEEEEEEE.SSSS-SBGTTHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHTS CS
        PfkB 203 .......edieealaalhklkakgaktvvvtlGkeGalvve..kdgelkvpavpkvkvvDttGAGDsfvggflaallegksleealrfanavAalvvqk 292
                         +++ ala ++k+++k+ + vv+t+G++ ++vv+  k++++k + vp++++vDt+GAGD+f+ggf+aal+  + +  a+ +++++++ +++ 
  EPX72111.1 227 giqtkdvGQVALALASVEKVNKKRSRAVVITQGADATIVVQdgKVNTYKPNHVPAEEIVDTNGAGDAFAGGFIAALAGDHGIDYAITLGHWLGQECIKV 325
                 5************************************************************************************************** PP

                 SSSSTCSCC CS
        PfkB 293 kgaiaslpt 301
                 +g++ +lp+
  EPX72111.1 326 SGTTLPLPK 334
                 ******997 PP

>> DEC-1_C  Dec-1 protein, C terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   2.8e-05      0.17      70     121 ..      43      94 ..      29     101 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 2.8e-05
     DEC-1_C  70 rpvvqsygtsyggggygsnaygvprpvnsyqsqgyraavgndevdemlrqhq 121
                   + +    syg gg   n+    + v   +s  +  +vgnd+   mlr+ +
  EPX72111.1  43 MGIYKETCISYGAGGAAQNSCRAAQYVLPPNSTVFAGCVGNDDFARMLRESN 94 
                 556667789****************************************875 PP

>> PS_pyruv_trans  Polysaccharide pyruvyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   3.7e-05      0.22      61     131 ..     140     212 ..      84     214 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 3.7e-05
                     ................EEE--E....EEEETT-HHH.HHHHHHHHHHS-SSEEEE-SEEE..-S-HHHHHHHHHHHHHTTEE CS
  PS_pyruv_trans  61 i..........ddaddviivGgdgtlgndgdlsrlp.dalrllflakkagkpviilgqgiGpflnealrkllkkilakadli 131
                     +           +++ ++ vGg        +l   p ++l l++ a  ++kp +i+  ++ pfl++++++++ ++ + +d+i
      EPX72111.1 140 KdlkapevwslVESSKIFYVGG-------YHLTVSPeAMLELAKHAVEKNKP-YIMNLSA-PFLSQFFKEQMDSVVPYCDYI 212
                     0334445555567777******.......555555678899***********.99*****.********************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (340 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       427  (0.0238162); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2400.14
//
Query:       EPX72112.1  [L=434]
Description: dolichyl-di-phosphooligosaccharide-protein glycotransferase subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   9.6e-129  429.8   0.0   1.2e-128  429.5   0.0    1.0  1  DDOST_48kD  Oligosaccharyltransferase 48 kDa subunit beta
  ------ inclusion threshold ------
       0.12   12.2   0.0       0.19   11.5   0.0    1.3  1  DUF724      Protein of unknown function (DUF724)


Domain annotation for each model (and alignments):
>> DDOST_48kD  Oligosaccharyltransferase 48 kDa subunit beta
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  429.5   0.0  1.4e-132  1.2e-128       7     412 ..      30     428 ..      24     431 .. 0.93

  Alignments for each domain:
  == domain 1  score: 429.5 bits;  conditional E-value: 1.4e-132
  DDOST_48kD   7 seaekeeyskflksLeergfeltfksakdeslsLfkygerkYdhlillapkvkelgksltpkallefvnkggniLvalsssklpesirsllselgiels 105
                 +  + e+ys+fl+sL+e+gf++t+ ++kde+ +Lf+ygerkYd++il+++++k+lg +++pka+lef ++ggn+L+a++s+  pe ir+l ++l++++ 
  EPX72112.1  30 H--SLEDYSTFLESLRENGFDVTVANVKDEKAKLFEYGERKYDNVILFSTQSKSLGAAFSPKAILEFAQAGGNVLFAAGSNL-PEGIRELGRQLDMYVG 125
                 3..579***********************************************************************99997.**************** PP

  DDOST_48kD 106 ergskvvDhfnydsesdaekhdvlllsspeellakvknifs.ekkkeeevlfrgvgallgnnplllpiLrapstsysydpkeeeesaeeafavGsqlsl 203
                 er+s+vvDhf++ + sd+e+   +ll++    l ++ +i+s e++++++++++g g+ lg+n  + p+Lr++ ++y y++k+e++ +ee++a+G ql+l
  EPX72112.1 126 ERHSSVVDHFHSVEGSDDES---VLLDA----LTESPHIISdETRQAGSIVYKGNGHFLGKNYRAQPVLRGNPSTYVYNKKSESQVSEEPWAAGAQLFL 217
                 ***********987766643...44444....33455555548899999************************************************** PP

  DDOST_48kD 204 vaalQarnnaRvvfvGslellsdeffdakvkkkeksgnrefakdltkWtfqekgvlrvksvehhkee..eeeenpeiYrikdevtYsielseysndkwv 300
                 v+ +Q+  + R+ f+Gs e++ + +++   + + + +n+ fa+dlt+W+fq+ +vl ++++++ k++   e  n ++Yrikd++++si+++ +++++ +
  EPX72112.1 218 VSVFQSDAGERIGFSGSPEMFANAYLSP-SSPSYSVANALFARDLTNWVFQRVAVLHATNMTYGKVGepYELRNASTYRIKDQMVFSIDIAILNDGQPQ 315
                 **************************76.5567999******************************977567889************************ PP

  DDOST_48kD 301 PfeaddlqLefvmLdPyirltLkpkk.ssedatvYstkfklPDrhGvFkFkvdYkRpgltyieekttvsvrhlahdeypRfissAwpYyasafsvvvgf 398
                 P+++dd+q+e+vmLdPy+r+++ p++  s+++++Y++ f +PD++GvF++k+ Y+Rpgl+ i+ek t+++r++ h+eypRf+++A+pYy+s+f+v+ +f
  EPX72112.1 316 PYVTDDVQMELVMLDPYYRVNMVPVAsGSQTHQHYEAIFDVPDHYGVFTYKIAYHRPGLNPIDEKATFTIRQFFHNEYPRFLPHAYPYYVSCFAVLGAF 414
                 *************************965559******************************************************************** PP

  DDOST_48kD 399 llFvalflyskeek 412
                 l+F+ ++l++ +++
  EPX72112.1 415 LIFCGIWLVQIPKA 428
                 ********998876 PP

>> DUF724  Protein of unknown function (DUF724)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   2.2e-05      0.19      49      90 ..      11      52 ..       4      64 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 2.2e-05
      DUF724 49 vsfagllekvkklsiddsrseleslkeslaeLekhGFdVkal 90
                +s++ +++ ++++ +++   +le++++ l  L+++GFdV++ 
  EPX72112.1 11 LSWSLFVQGLRHTILATADHSLEDYSTFLESLRENGFDVTVA 52
                6677788888888899999********************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (434 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       407  (0.0227007); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.38
# Mc/sec: 3416.29
//
Query:       EPX72113.1  [L=577]
Description: F-box protein Pof3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-12   46.5   8.1    2.7e-11   43.0   0.3    4.5  4  F-box       F-box domain
    2.2e-10   40.3   0.5    2.7e-09   36.8   0.0    2.7  2  F-box-like  F-box-like
    8.8e-07   28.6   2.0    8.8e-07   28.6   2.0    3.5  3  LRR_8       Leucine rich repeat
    0.00088   18.3   0.1     0.0017   17.3   0.1    1.4  1  NARP1       NMDA receptor-regulated protein 1
     0.0024   18.2  19.6     0.0028   18.0   1.1    5.7  7  LRR_4       Leucine Rich repeats (2 copies)
  ------ inclusion threshold ------
      0.037   13.9   6.1        1.1    9.1   0.1    2.9  3  TPR_1       Tetratricopeptide repeat
      0.047   13.8   6.5        4.7    7.6   0.1    3.4  3  TPR_2       Tetratricopeptide repeat
      0.052   13.7   1.1        0.1   12.8   1.1    1.5  1  TPR_9       Tetratricopeptide repeat
      0.079   12.3   0.3       0.12   11.7   0.3    1.2  1  TPR_MalT    MalT-like TPR region
      0.084   13.0   0.1       0.22   11.7   0.1    1.7  1  TetR_C_17   Tetracyclin repressor-like, C-terminal domain
       0.12   13.2   1.4        2.7    9.0   0.9    2.5  2  TPR_14      Tetratricopeptide repeat
        0.4   10.8   9.7        2.2    8.5   0.4    5.0  6  LRR_6       Leucine Rich repeat
        1.4    9.4   4.5         59    4.2   0.0    3.5  3  TPR_8       Tetratricopeptide repeat
        1.5    9.6  10.2        4.2    8.3   0.1    5.2  4  LRR_1       Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.0   0.3   2.1e-14   2.7e-11       2      39 ..     135     172 ..     134     179 .. 0.94
   2 ?   -2.8   0.0         5   6.5e+03      30      42 ..     452     464 ..     448     467 .. 0.83
   3 ?    1.0   0.2      0.33   4.3e+02       5      27 ..     490     512 ..     488     514 .. 0.90
   4 ?    3.8   0.1     0.042        54      17      31 ..     531     545 ..     529     550 .. 0.86

  Alignments for each domain:
  == domain 1  score: 43.0 bits;  conditional E-value: 2.1e-14
                 HHHHS-HHHHHHHHHTS-HHHHHHHCTT-HHHHHHHTT CS
       F-box   2 tlsrLPsevlrhILerLplsdllalrrVSkgwrilids 39 
                  +s LP e+l++I++++++++++++++VSk+w++ i++
  EPX72113.1 135 LFSLLPREILLNIFQYVEFRTIVRCMQVSKNWKDSIKR 172
                 599*******************************9997 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 5
                 -HHHHHHHTTHHH CS
       F-box  30 Skgwrilidsdrl 42 
                 S ++r+li +d+l
  EPX72113.1 452 SPNLRSLILRDSL 464
                 7889999999876 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.33
                 HS-HHHHHHHHHTS-HHHHHHHC CS
       F-box   5 rLPsevlrhILerLplsdllalr 27 
                 +L ++ l hI   +p  ++l+l+
  EPX72113.1 490 ELNNDHLSHIVACCPKLEVLNLS 512
                 688999***************98 PP

  == domain 4  score: 3.8 bits;  conditional E-value: 0.042
                 TS-HHHHHHHCTT-H CS
       F-box  17 rLplsdllalrrVSk 31 
                  L  ++++++++VSk
  EPX72113.1 531 LLKRVEIVNCSSVSK 545
                 577899********9 PP

>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.8   0.0   2.1e-12   2.7e-09       2      38 ..     137     173 ..     136     183 .. 0.87
   2 ?    0.3   0.1      0.52   6.6e+02      16      30 ..     532     546 ..     523     553 .. 0.81

  Alignments for each domain:
  == domain 1  score: 36.8 bits;  conditional E-value: 2.1e-12
  F-box-like   2 srLPdEiLlqIFsyLppsdLlrlalVCrrWrrvaldt 38 
                 s LP EiLl IF+y+++++++r+++V++ W++ + ++
  EPX72113.1 137 SLLPREILLNIFQYVEFRTIVRCMQVSKNWKDSIKRE 173
                 56******************************99776 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.52
  F-box-like  16 LppsdLlrlalVCrr 30 
                 L+  ++++++ V+++
  EPX72113.1 532 LKRVEIVNCSSVSKD 546
                 566699*******97 PP

>> LRR_8  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.1      0.31     4e+02      25      51 ..     318     344 ..     314     346 .. 0.83
   2 ?   -1.2   0.2       1.4   1.8e+03       2      27 ..     350     376 ..     348     380 .. 0.47
   3 !   28.6   2.0   6.9e-10   8.8e-07       1      59 [.     453     514 ..     453     514 .. 0.92

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.31
                 TT--EEE--SS---GGGGGGGTT--S- CS
       LRR_8  25 snLkvLdLsnNllttlspgafsgLpsL 51 
                  +Lk+L+  +N+++ ++++  + L+sL
  EPX72113.1 318 LHLKSLQFIRNQIHPFHEKEQEFLASL 344
                 689**********99998887777776 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 1.4
                 T-SEEE-TTS-.-SEE-TTSSTT-TT- CS
       LRR_8   2 nLtsLdLsnNr.ltslddeaFkglsnL 27 
                 nL++L+++  + l s  +e  ++l++L
  EPX72113.1 350 NLQELVVTYQSnLISTLKENKQDLKHL 376
                 555555555444444444444444444 PP

  == domain 3  score: 28.6 bits;  conditional E-value: 6.9e-10
                 TT-SEEE-TTS-.-SEE-TTSSTT-TT--EEE--SS.---G..GGGGGGTT--S-.EEE--SS CS
       LRR_8   1 pnLtsLdLsnNr.ltslddeaFkglsnLkvLdLsnN.lltt..lspgafsgLpsLrsLdLsgN 59 
                 pnL+sL+L+++  ++s   e F+ l++L+vLdLs+N +l+   ls +  +++p+L+ L+Ls++
  EPX72113.1 453 PNLRSLILRDSLpISSKFMELFTYLPHLEVLDLSDNaELNNdhLS-HIVACCPKLEVLNLSNC 514
                 79**********************************989874364.88899**********86 PP

>> NARP1  NMDA receptor-regulated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.1   1.3e-06    0.0017     200     250 ..      14      65 ..      12      75 .. 0.87

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 1.3e-06
                 HHHHHHT-SHHHHHHHHHHHHH-TT.-HHHHHHHHHHHHHTT-HHHHHHHHH CS
       NARP1 200 qhydklgsrekAleyidkaiehtpt.lvelyltKarilkhaGdlkkAaevme 250
                 +hy   +++e Al yi ++ie++p+ +++l+ ++a +lk +G  ++A + ++
  EPX72113.1  14 KHYLLKRRYEDALAYITSCIEQEPNpVIDLFEIRAIVLKEMGLYEEAQADAQ 65 
                 6999999****************97589**************9999986554 PP

>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       2.3   2.9e+03      19      30 ..     283     293 ..     264     296 .. 0.77
   2 ?    1.5   0.6      0.35   4.5e+02      22      40 ..     348     367 ..     340     375 .. 0.71
   3 ?    2.8   1.5      0.14   1.8e+02       1      32 [.     349     380 ..     349     403 .. 0.71
   4 ?    3.8   0.7     0.065        83       1      33 [.     424     462 ..     424     469 .. 0.73
   5 !   11.6   1.9   0.00023       0.3       1      36 [.     453     491 ..     453     498 .. 0.74
   6 !   18.0   1.1   2.2e-06    0.0028       1      36 [.     478     515 ..     478     524 .. 0.82
   7 !    9.8   0.2   0.00088       1.1       1      32 [.     504     539 ..     504     545 .. 0.65

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 2.3
                 HHH-TT--EEE- CS
       LRR_4  19 leklpnLkeLdL 30 
                 l+ +++L+ L L
  EPX72113.1 283 LA-CKKLERLEL 293
                 55.899999988 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.35
                 -TT--EEE-..-S-----GG CS
       LRR_4  22 lpnLkeLdL.sgNnlitdld 40 
                  pnL+eL +  + nli++l 
  EPX72113.1 348 SPNLQELVVtYQSNLISTLK 367
                 69999998854456887775 PP

  == domain 3  score: 2.8 bits;  conditional E-value: 0.14
                 SS--EEE--..SS---E-S-HHH-TT--EEE-.- CS
       LRR_4   1 pnLevLdLs..nNqltdiplleklpnLkeLdLsg 32 
                 pnL++L     +N ++++   +   +Lk+L++ +
  EPX72113.1 349 PNLQELVVTyqSNLISTLKENK--QDLKHLHIID 380
                 7899999997679999977733..3355555533 PP

  == domain 4  score: 3.8 bits;  conditional E-value: 0.065
                 SS--EEE--.SS---E-S-HH......H-TT--EEE-.-S CS
       LRR_4   1 pnLevLdLs.nNqltdiplle......klpnLkeLdLsgN 33 
                 ++L+++ Ls   +ltd +  +      + pnL++L L + 
  EPX72113.1 424 TSLKSVELSlFIRLTDQEIENtvkflvSSPNLRSLIL-RD 462
                 57888888888899999994445555599*****977.44 PP

  == domain 5  score: 11.6 bits;  conditional E-value: 0.00023
                 SS--EEE--SS---E-S-.....HHH-TT--EEE-.-S--- CS
       LRR_4   1 pnLevLdLsnNqltdipl.....leklpnLkeLdLsgNnli 36 
                 pnL++L L++  l  i++     +  lp+L++LdLs+N  +
  EPX72113.1 453 PNLRSLILRD-SLP-ISSkfmelFTYLPHLEVLDLSDNAEL 491
                 7999999997.444.22334776668**********99544 PP

  == domain 6  score: 18.0 bits;  conditional E-value: 2.2e-06
                 SS--EEE--SS.---E-S-HH....H-TT--EEE-.-S--- CS
       LRR_4   1 pnLevLdLsnN.qltdiplle....klpnLkeLdLsgNnli 36 
                 p+LevLdLs+N  l   + l+     +p+L++L+Ls++  i
  EPX72113.1 478 PHLEVLDLSDNaELN-NDHLShivaCCPKLEVLNLSNC--I 515
                 79*******8867**.6797778856*********765..4 PP

  == domain 7  score: 9.8 bits;  conditional E-value: 0.00088
                 SS--EEE--SS.---E-S-...HHH-TT--EEE-.- CS
       LRR_4   1 pnLevLdLsnN.qltdipl...leklpnLkeLdLsg 32 
                 p+LevL+Lsn+  +t  ++   l++l  Lk + + +
  EPX72113.1 504 PKLEVLNLSNCiSVTGSGFvslLRGLALLKRVEIVN 539
                 79*******855555544466655666666666544 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.1   0.00089       1.1      11      33 ..      16      38 ..      15      39 .. 0.94
   2 ?    7.3   0.1    0.0034       4.3       7      34 .]      47      74 ..      45      74 .. 0.92
   3 ?   -3.4   0.2       8.2   1.1e+04       1      12 [.      75      86 ..      75      87 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00089
                HHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1 11 yfklgkydeAleyyekALelnPn 33
                y+ + +y++Al+y   ++e +Pn
  EPX72113.1 16 YLLKRRYEDALAYITSCIEQEPN 38
                88999*****************9 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0034
                HHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1  7 lGnayfklgkydeAleyyekALelnPnn 34
                ++ ++ ++g y+eA ++ ++ + ln  n
  EPX72113.1 47 RAIVLKEMGLYEEAQADAQRMINLNQRN 74
                78999****************9999865 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 8.2
                HHHHHHHHHHHH CS
       TPR_1  1 akalynlGnayf 12
                a+ + +l+++++
  EPX72113.1 75 ARGYLRLAQLLQ 86
                788999*99875 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.1    0.0042       5.4      11      33 ..      16      38 ..      14      39 .. 0.92
   2 ?    7.6   0.1    0.0036       4.7       7      34 .]      47      74 ..      42      74 .. 0.90
   3 ?    0.3   0.3      0.76   9.7e+02       1      29 [.      75     103 ..      75     105 .. 0.86

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0042
       TPR_2 11 yyklgdyeeAleafekAleldPn 33
                y+ + +ye+Al++   ++e +Pn
  EPX72113.1 16 YLLKRRYEDALAYITSCIEQEPN 38
                88999****************98 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0036
       TPR_2  7 lGlayyklgdyeeAleafekAleldPnn 34
                ++ ++ ++g yeeA ++ ++ + l+ +n
  EPX72113.1 47 RAIVLKEMGLYEEAQADAQRMINLNQRN 74
                79999******************99765 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 0.76
       TPR_2   1 aealynlGlayyklgdyeeAleafekAle 29 
                 a+++ +l++++ + g   +A + + + l+
  EPX72113.1  75 ARGYLRLAQLLQYDGFNSKADHVYMQGLK 103
                 67899********9999999888888776 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   1.1     8e-05       0.1       5      67 ..      16      80 ..      14      86 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 8e-05
       TPR_9  5 aireedweralavverllllaPddpeerrd.RGlllaqlGclsaAladLeaylalap.dapdaea 67
                ++ ++++e ala++ + +   P+++ ++++ R+++l ++G +++A ad ++++ l+  +a+   +
  EPX72113.1 16 YLLKRRYEDALAYITSCIEQEPNPVIDLFEiRAIVLKEMGLYEEAQADAQRMINLNQrNARGYLR 80
                566899***********************99*********************9766424444444 PP

>> TPR_MalT  MalT-like TPR region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.3   9.5e-05      0.12     103     250 ..      22     160 ..      19     171 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 9.5e-05
    TPR_MalT 103 yeqalqlateqglqqlplvgfllvlladllyEwndLeeAeqhlqeGielleqlepeaaldayvllarialaqGdleeAetllekaeelaresnfhvdwl 201
                 ye+al+++t   +q+   v  l+ ++a +l E++  eeA+  +q+ i l ++      ++ y+ la++ +  G +++A+++  +  + +++ +  +++ 
  EPX72113.1  22 YEDALAYITSCIEQEPNPVIDLFEIRAIVLKEMGLYEEAQADAQRMINLNQRN-----ARGYLRLAQLLQYDGFNSKADHVYMQGLKYVHKLDP-MRQK 114
                 999***999999998889999999***********************999877.....99********************99998888885444.5677 PP

    TPR_MalT 202 anaeevrvrlwlaqgdlaaaerwleaaelpsdddnhflelelrnlarvl 250
                  ++ +++++  +  ++++  +++ +  +++    n f+++e+r+++r++
  EPX72113.1 115 LKIASTQLL--QRMQKTRPVQDLFSLLPREIL-LNIFQYVEFRTIVRCM 160
                 777888864..888899999998888877755.99***********997 PP

>> TetR_C_17  Tetracyclin repressor-like, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   0.00017      0.22      26      58 ..       3      35 ..       1      51 [. 0.91

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00017
                HHHHGGGG-HHHHHHHHHHHHHHHHHHHHHHHH CS
   TetR_C_17 26 EyfltsyreeerrayleeRyerlvealkellqe 58
                 y + ++re++++ +l++Rye + + +++ +++
  EPX72113.1  3 NYQIKHWREKTKHYLLKRRYEDALAYITSCIEQ 35
                68999**********************999875 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0      0.36   4.6e+02      11      34 ..      16      39 ..       9      45 .. 0.85
   2 ?    9.0   0.9    0.0021       2.7       7      44 .]      47      84 ..      41      84 .. 0.94

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.36
      TPR_14 11 llalGdpdeAiallrralalaPdd 34
                +l  +++++A+a+   ++++ P++
  EPX72113.1 16 YLLKRRYEDALAYITSCIEQEPNP 39
                667789***************985 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0021
      TPR_14  7 laeallalGdpdeAiallrralalaPddaeawlllaql 44
                +a +l + G ++eA a ++r++ l+  +a+ +l+laql
  EPX72113.1 47 RAIVLKEMGLYEEAQADAQRMINLNQRNARGYLRLAQL 84
                799*********************************97 PP

>> LRR_6  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       5.9   7.6e+03       2      12 ..     285     295 ..     284     295 .. 0.84
   2 ?   -0.9   0.0       1.8   2.3e+03       4      15 ..     319     330 ..     318     332 .. 0.85
   3 ?   -1.8   0.0       3.7   4.7e+03       3      11 ..     424     432 ..     422     433 .. 0.86
   4 ?   -0.7   0.0       1.6   2.1e+03       2      12 ..     452     462 ..     451     467 .. 0.86
   5 ?    8.5   0.4    0.0017       2.2       3      15 ..     478     491 ..     476     497 .. 0.84
   6 ?    3.9   0.1     0.052        67       2      13 ..     503     514 ..     502     525 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 5.9
       LRR_6   2 nthLteLdLsg 12 
                 + +L+ L+L++
  EPX72113.1 285 CKKLERLELAD 295
                 789****9975 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 1.8
       LRR_6   4 hLteLdLsgNdI 15 
                 hL++L+   N+I
  EPX72113.1 319 HLKSLQFIRNQI 330
                 9****9988888 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 3.7
       LRR_6   3 thLteLdLs 11 
                 t+L++++Ls
  EPX72113.1 424 TSLKSVELS 432
                 89*****98 PP

  == domain 4  score: -0.7 bits;  conditional E-value: 1.6
       LRR_6   2 nthLteLdLsg 12 
                 +++L++L L++
  EPX72113.1 452 SPNLRSLILRD 462
                 799****9987 PP

  == domain 5  score: 8.5 bits;  conditional E-value: 0.0017
       LRR_6   3 thLteLdLsgNd.I 15 
                 +hL+ LdLs+N  +
  EPX72113.1 478 PHLEVLDLSDNAeL 491
                 8**********755 PP

  == domain 6  score: 3.9 bits;  conditional E-value: 0.052
       LRR_6   2 nthLteLdLsgN 13 
                 +++L+ L+Ls +
  EPX72113.1 503 CPKLEVLNLSNC 514
                 899*******98 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0     0.046        59      11      33 ..      16      38 ..      16      39 .. 0.90
   2 ?    4.0   0.1     0.057        72      10      32 ..      50      72 ..      45      74 .. 0.85
   3 ?    0.7   0.2      0.65   8.4e+02       1      29 [.      75     103 ..      75     104 .. 0.86

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.046
                HHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8 11 ylklgdyeeAkeyyekaleldpd 33
                yl + +ye A +y+  ++e +p+
  EPX72113.1 16 YLLKRRYEDALAYITSCIEQEPN 38
                67789**************9997 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.057
                HHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8 10 iylklgdyeeAkeyyekaleldp 32
                +++++g yeeA++  ++ + l++
  EPX72113.1 50 VLKEMGLYEEAQADAQRMINLNQ 72
                6899*********9999888876 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.65
                 CCHHHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_8   1 aeayynlgsiylklgdyeeAkeyyekale 29 
                 a+ y++l+++++  g   +A  +y++ l+
  EPX72113.1  75 ARGYLRLAQLLQYDGFNSKADHVYMQGLK 103
                 689********999999999999988876 PP

>> LRR_1  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.1       2.4     3e+03       1      12 [.     350     361 ..     350     400 .. 0.65
   2 ?   -1.5   0.1       5.2   6.7e+03       1      10 [.     454     463 ..     454     469 .. 0.79
   3 ?    3.6   0.2      0.12   1.5e+02       1      11 [.     479     489 ..     479     502 .. 0.77
   4 ?    8.3   0.1    0.0033       4.2       1      12 [.     505     516 ..     505     530 .. 0.80

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 2.4
       LRR_1   1 nLrhLdLsnnpl 12 
                 nL++L ++++++
  EPX72113.1 350 NLQELVVTYQSN 361
                 677777666665 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 5.2
       LRR_1   1 nLrhLdLsnn 10 
                 nLr+L L++ 
  EPX72113.1 454 NLRSLILRDS 463
                 89***99876 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.12
       LRR_1   1 nLrhLdLsnnp 11 
                 +L++LdLs+n 
  EPX72113.1 479 HLEVLDLSDNA 489
                 69******996 PP

  == domain 4  score: 8.3 bits;  conditional E-value: 0.0033
       LRR_1   1 nLrhLdLsnnpl 12 
                 +L++L+Lsn++ 
  EPX72113.1 505 KLEVLNLSNCIS 516
                 7*********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (577 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       655  (0.036533); expected 358.6 (0.02)
Passed bias filter:                      405  (0.0225891); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.59u 0.29s 00:00:00.87 Elapsed: 00:00:00.46
# Mc/sec: 3804.78
//
Query:       EPX72114.1  [L=609]
Description: mitotic cohesin complex [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.5e-38  130.6   0.1    5.6e-38  129.5   0.1    1.6  1  Rad21_Rec8_N  N terminus of Rad21 / Rec8 like protein
    2.6e-12   45.8   0.0    6.1e-12   44.6   0.0    1.6  1  Rad21_Rec8    Conserved region of Rad21 / Rec8 like protein


Domain annotation for each model (and alignments):
>> Rad21_Rec8_N  N terminus of Rad21 / Rec8 like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.5   0.1   6.3e-42   5.6e-38       1     101 [.       1     102 [.       1     110 [. 0.94

  Alignments for each domain:
  == domain 1  score: 129.5 bits;  conditional E-value: 6.3e-42
  Rad21_Rec8_N   1 MfysqellskkgplakvWlaAtlekklskkeilevniekaveeIln.peaplaLrlsgqLllGvvriyskkvkyllsDceealekikkafksikeak 96 
                   Mfys+ +lskkgplakvWlaA++ekklsk + l+++ie++v++I++ ++ap+aLrlsgqL+lGvvriys+k++yll+Dc+eal ++k++f++ + ++
    EPX72114.1   1 MFYSEAILSKKGPLAKVWLAAHWEKKLSKVQTLHTDIEQSVHAIVTeETAPMALRLSGQLMLGVVRIYSRKARYLLEDCNEALLRLKMTFRPGQAEQ 97 
                   9*********************************************5678*****************************************998668 PP

  Rad21_Rec8_N  97 idlpe 101
                   i+ p+
    EPX72114.1  98 INAPS 102
                   88776 PP

>> Rad21_Rec8  Conserved region of Rad21 / Rec8 like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.6   0.0   6.8e-16   6.1e-12       4      55 .]     552     604 ..     550     604 .. 0.90

  Alignments for each domain:
  == domain 1  score: 44.6 bits;  conditional E-value: 6.8e-16
                 HHTT----------HHHHHHHHHHHHHHHHTSEEEEE.SSTT--EEEEE-GGG CS
  Rad21_Rec8   4 ekdslsllpagktRkeAArlFyelLvLatkgvIkvkQ.eaPYgdIlitlgpkl 55 
                 e  s+  l+ + +R  A++lF+++LvLatk++I+vkQ e   gdI++t++ k+
  EPX72114.1 552 EQASFKDLSGNAKRDDAVQLFFDVLVLATKDAISVKQdESSEGDIILTAKQKM 604
                 6778999******************************666779*****99886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (609 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       593  (0.0330749); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.45
# Mc/sec: 4026.44
//
Query:       EPX72115.1  [L=211]
Description: hypothetical protein SOCG_04808 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       755  (0.0421105); expected 358.6 (0.02)
Passed bias filter:                      513  (0.0286129); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1563.63
//
Query:       EPX72116.1  [L=748]
Description: anaphase-promoting complex subunit Apc5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-31  107.9   1.7      2e-31  107.9   1.7    3.1  3  ANAPC5    Anaphase-promoting complex subunit 5


Domain annotation for each model (and alignments):
>> ANAPC5  Anaphase-promoting complex subunit 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.9   1.7   1.1e-35     2e-31       2      93 ..     270     358 ..     269     359 .. 0.97
   2 ?   -3.2   0.1      0.52   9.4e+03      16      30 ..     427     441 ..     417     467 .. 0.68
   3 ?    0.1   0.1     0.047   8.5e+02       7      66 ..     524     577 ..     517     600 .. 0.54

  Alignments for each domain:
  == domain 1  score: 107.9 bits;  conditional E-value: 1.1e-35
      ANAPC5   2 llsylnalrakdYqqaldsLhryFDyvlsqnessqkksyqyalLnlaslhadfghneeAvkaleeairlArenkDkscLalalawlarllkk 93 
                 + ++lna+ + dYqq++++L+ryFD+v+++ne+    syqyalLnl +l+adfg+++eA++a+e++i++Are++D +cL++alaw+++++++
  EPX72116.1 270 HFRFLNAWFKGDYQQSIENLCRYFDHVMHSNERV---SYQYALLNLSILQADFGCDKEALRAIEDTINTARESGDIACLNFALAWMYEFKRS 358
                 679*******************************...****************************************************975 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 0.52
      ANAPC5  16 qaldsLhryFDyvls 30 
                 ++++s  ry D +++
  EPX72116.1 427 ESFHSFSRYMDLMQE 441
                 556666666666554 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.047
      ANAPC5   7 nalrakdYqqaldsLhryFDyvlsqnessqkksyqyalLnlaslhadfghneeAvkalee 66 
                 +a+++k+Y++a   L +    + +++es    + +y  L+l +     g+  ++++a+e+
  EPX72116.1 524 KAINEKNYKTANF-LLKSLNGFRHSKESL--FKTHYYSLKLDISL---GNFSQSIDAIEN 577
                 5667777776644.334444333333333..24455555544444...444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (748 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       619  (0.0345251); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.24s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 5471.80
//
Query:       EPX72117.1  [L=161]
Description: 60S ribosomal protein L21 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.5e-47  158.0   5.2    7.1e-47  157.4   5.2    1.3  1  Ribosomal_L21e  Ribosomal protein L21e


Domain annotation for each model (and alignments):
>> Ribosomal_L21e  Ribosomal protein L21e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.4   5.2     4e-51   7.1e-47       1     101 []       1     101 [.       1     101 [. 0.99

  Alignments for each domain:
  == domain 1  score: 157.4 bits;  conditional E-value: 4e-51
                     X--S-STTTT-TTTTS--GGG-SS--SHHHH----TT-EEEE---TT--SS---GGGTT-EEEE..EEEETTEEEEEEEETTE..EEEEEE-GGG CS
  Ribosomal_L21e   1 mknskglrrgtrklfskkfrkkgvpplstylreykkGdkVdikidpsvqkgmphkryhGktgrvynvtkravgvivnkkvggkileKriivrieh 95 
                     m++s glr++tr++f++ fr++g ++lstyl++yk+Gd+Vdik++++vqkgmphk+yhGktg vynvt+++vgv+++k vg++++eKr++vrieh
      EPX72117.1   1 MPHSFGLRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKANGAVQKGMPHKYYHGKTGIVYNVTQSSVGVLIYKIVGNRYMEKRVNVRIEH 95 
                     89********************************************************************************************* PP

                     EEE--. CS
  Ribosomal_L21e  96 lkksks 101
                     +k+sk+
      EPX72117.1  96 VKHSKC 101
                     ****98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       973  (0.0542696); expected 358.6 (0.02)
Passed bias filter:                      572  (0.0319036); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.27s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1194.33
//
Query:       EPX72118.1  [L=262]
Description: 40S ribosomal protein S4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.5e-38  130.5   0.7    3.2e-38  129.5   0.7    1.6  1  Ribosomal_S4e  Ribosomal family S4e
    1.2e-26   92.1   0.1    2.5e-26   91.0   0.1    1.6  1  40S_S4_C       40S ribosomal protein S4 C-terminus
    3.6e-19   68.6   8.2    7.6e-19   67.5   8.2    1.6  1  RS4NT          RS4NT (NUC023) domain
    8.9e-07   28.5   0.2    2.1e-06   27.4   0.0    1.8  2  S4             S4 domain
    0.00011   22.0   0.7    0.00054   19.8   0.4    2.4  2  KOW            KOW motif


Domain annotation for each model (and alignments):
>> Ribosomal_S4e  Ribosomal family S4e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.5   0.7     9e-42   3.2e-38       1      75 []      95     169 ..      95     169 .. 0.99

  Alignments for each domain:
  == domain 1  score: 129.5 bits;  conditional E-value: 9e-42
                    TTEEEEEEE-TTSSEEEEEE-TTCCCEEEEEECEEEEECCCEEEEEETTS-EEEESSTT-STTEEEEEETTTTEE CS
  Ribosomal_S4e   1 tgenyrllydtkgrfalhkItseeakyKLcKikkkttvkkgipqlvthdGrtirypdpdikvnDtvkidleenkI 75 
                    tge++rl+yd+kgrf++h+It+eeakyKLcK+k+++++ kgip +vthdGrtirypdp+ikvnDt+k++le+nkI
     EPX72118.1  95 TGEHFRLVYDVKGRFTVHRITAEEAKYKLCKVKRVQLGAKGIPFIVTHDGRTIRYPDPLIKVNDTIKLNLETNKI 169
                    89************************************************************************9 PP

>> 40S_S4_C  40S ribosomal protein S4 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.0   0.1   7.1e-30   2.5e-26       1      46 [.     212     257 ..     212     259 .. 0.97

  Alignments for each domain:
  == domain 1  score: 91.0 bits;  conditional E-value: 7.1e-30
                 -SSS-EEEEEGGGEEE--STTS-SS---SS-S----HHHHHHHHHH CS
    40S_S4_C   1 DaaGntFATRlsNvFvIGkgnkpwvsLPkgkGiklsiaeerdkrla 46 
                 Da++++FATRlsNvFvIG+ nk+w+sLPkgkG+klsi+eerd+r+a
  EPX72118.1 212 DALDREFATRLSNVFVIGETNKSWISLPKGKGVKLSITEERDRRRA 257
                 9*******************************************98 PP

>> RS4NT  RS4NT (NUC023) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.5   8.2   2.1e-22   7.6e-19       1      37 []       3      39 ..       3      39 .. 0.98

  Alignments for each domain:
  == domain 1  score: 67.5 bits;  conditional E-value: 2.1e-22
                -S----EETTTS-TTS---SSSSSEE----SSSS-TT CS
       RS4NT  1 rGpkkHLKrlaAPkhWpldkkegvfavkPspGPHklr 37
                rGpkkHLKr+aAP+hW+ldk++g++a+kPs+GPHk+r
  EPX72118.1  3 RGPKKHLKRVAAPHHWLLDKLSGTYAPKPSAGPHKAR 39
                8**********************************87 PP

>> S4  S4 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   0.0   5.7e-10   2.1e-06       2      48 .]      43      90 ..      42      90 .. 0.95
   2 ?   -2.8   0.0       1.5   5.3e+03      31      48 .]     143     160 ..     140     160 .. 0.73

  Alignments for each domain:
  == domain 1  score: 27.4 bits;  conditional E-value: 5.7e-10
                EHHHHH.HHTTSSSSHHHHHHHHHTTTEEETTEEE--TT-EE-TTCEE CS
          S4  2 RLdkvl.arlglassrreArqlIehGrVlVNGkvvkdpsyrVkpgDvi 48
                +L ++l  rl++a   re+r + +++ ++V+Gkv++d  ++ +++Dvi
  EPX72118.1 43 PLIVFLrNRLKYALNGREVRAILMQRLIKVDGKVRTDNTFPTGFMDVI 90
                67889999*************************************998 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.5
                 TTEEE--TT-EE-TTCEE CS
          S4  31 NGkvvkdpsyrVkpgDvi 48 
                 +G+ ++ p   +k++D+i
  EPX72118.1 143 DGRTIRYPDPLIKVNDTI 160
                 788888787778888876 PP

>> KOW  KOW motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       1.8   6.5e+03       9      15 ..      33      39 ..      33      41 .. 0.76
   2 !   19.8   0.4   1.5e-07   0.00054       4      31 ..     180     210 ..     178     211 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.8
                SSTTTTC CS
         KOW  9 sGphkGk 15
                +Gphk +
  EPX72118.1 33 AGPHKAR 39
                69**966 PP

  == domain 2  score: 19.8 bits;  conditional E-value: 1.5e-07
                 EEEESSSTTTTCEEEEEEEETTT...TEEEE CS
         KOW   4 hVkVvsGphkGktGkVvkvdqhk...vrVfv 31 
                  V+V++G+++G++G++ +++ h    ++++v
  EPX72118.1 180 QVMVTGGRNMGRVGTIIHREHHLgsfEIIHV 210
                 6*****************9998766666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (262 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       442  (0.0246528); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.44
# Mc/sec: 1805.46
//
Query:       EPX72119.1  [L=214]
Description: protein disulfide isomerase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.019   14.7   0.1      0.063   13.0   0.1    2.1  1  Abhydrolase_5  Alpha/beta hydrolase family
       0.09   12.0   0.0        1.6    8.0   0.0    2.0  2  Hydrolase_4    Serine aminopeptidase, S33
       0.15   12.2   2.3        1.1    9.4   0.1    3.1  4  RAP            RAP domain


Domain annotation for each model (and alignments):
>> Abhydrolase_5  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   1.1e-05     0.063       5      73 ..      32     108 ..      30     204 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.1e-05
  Abhydrolase_5   5 YpGakveaesYaelaeklaksGyevvlvklPlnlavl.gknkae...eiikea....pklekfvvgGhslGGvvasr 73 
                    Y G  v+ +    +ae+l k+Gy+v+++ +    ++  +  + +   +i  ++     +  ++++gG+s GG +a +
     EPX72119.1  32 YLGGSVDDACIVLMAENLQKKGYSVYVLDFASLPSIWfSGRRDAkifSIFTHHlveiHSPSHLLIGGYSYGGRIAMH 108
                    88999***********************9875544431333323011343332111133468999999999988765 PP

>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0     0.016        97      23      38 ..      45      60 ..      41      62 .. 0.90
   2 ?    8.0   0.0   0.00026       1.6      64     139 ..      80     159 ..      72     204 .. 0.74

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.016
  Hydrolase_4 23 laeaLaaqGfavyalD 38
                 +ae+L+++G++vy lD
   EPX72119.1 45 MAENLQKKGYSVYVLD 60
                 6899***********9 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.00026
  Hydrolase_4  64 afvekvkeehpelplfllGhSmGGliallyl...lrypdkva.glilsaPalkikaklkappllklllkllgkllpklqv 139
                   f+++++e h+ + l + G S GG ia++     +   + ++  +i+ aP l++ + l +  +   + k+ +k+   + v
   EPX72119.1  80 IFTHHLVEIHSPSHLLIGGYSYGGRIAMHPSiweKLDFNCINiSFIFLAPYLGLGSGLLTGYWNVKVDKIPQKASILYIV 159
                  5789999*********************9886554444467789999999999888765444444456666665555555 PP

>> RAP  RAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.11   6.3e+02      27      35 ..      49      57 ..      43      75 .. 0.84
   2 ?    9.4   0.1   0.00019       1.1       1      40 [.      86     125 ..      86     130 .. 0.86
   3 ?   -3.0   0.3       1.4   8.4e+03       6      21 ..     171     186 ..     168     187 .. 0.61
   4 ?   -1.3   0.0       0.4   2.4e+03       1      22 [.     188     209 ..     188     213 .. 0.67

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.11
         RAP 27 LsklGykvi 35
                L+k+Gy v 
  EPX72119.1 49 LQKKGYSVY 57
                9*****996 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00019
         RAP   1 IevdGpshyyknsknltgktklKkriLsklGykvinIpyf 40 
                 +e+  psh +  +  + g  ++   i++kl++++inI++ 
  EPX72119.1  86 VEIHSPSHLLIGGYSYGGRIAMHPSIWEKLDFNCINISFI 125
                 68888999666668888999*****************985 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 1.4
         RAP   6 pshyyknsknltgktk 21 
                  +++y++ kn+  k+k
  EPX72119.1 171 FHSFYSKLKNHCSKSK 186
                 5677777766555555 PP

  == domain 4  score: -1.3 bits;  conditional E-value: 0.4
         RAP   1 IevdGpshyyknsknltgktkl 22 
                 Ie  ++ h++   k+   +t+l
  EPX72119.1 188 IELHDCPHFLDLQKQKELSTAL 209
                 8999999997666555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       384  (0.0214178); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1597.83
//
Query:       EPX72120.1  [L=629]
Description: protein disulfide isomerase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.2e-17   62.9   0.0    1.4e-09   37.9   0.0    3.4  3  Thioredoxin    Thioredoxin
    5.3e-08   33.0   0.0    0.00049   20.1   0.0    3.6  4  Thioredoxin_6  Thioredoxin-like domain
  ------ inclusion threshold ------
       0.14   12.2   0.0          8    6.5   0.0    2.9  3  HyaE           Hydrogenase-1 expression protein HyaE


Domain annotation for each model (and alignments):
>> Thioredoxin  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   4.2e-06     0.025      34      88 ..      58     111 ..      32     128 .. 0.81
   2 !   37.9   0.0   2.3e-13   1.4e-09      18     101 ..     196     279 ..     179     281 .. 0.84
   3 !    6.5   0.0    0.0013       8.1      61     101 ..     340     384 ..     330     386 .. 0.72

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 4.2e-06
                  HCHHHHHHHHHHHCTTTSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTEEEEEE CS
  Thioredoxin  34 kalaPeleklaeelkdkvklakvdvdenedlakkyevegiPtlklfkngkevkky 88 
                  k l+  +e++++++  ++  akv +d + d +k  +v+ +P++ ++++g  ++++
   EPX72120.1  58 KDLSELWEATSTAYP-NLHHAKVLCDLEYDFCKSQGVHEYPQIAVLRSGAWMRNV 111
                  788889999999999.********************************9955544 PP

  == domain 2  score: 37.9 bits;  conditional E-value: 2.3e-13
                  SSEEEEEEE-T.TSHHHHCHHHHHHHHHHHCTTTSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTEEEEEEESS-HHHHHHHHH CS
  Thioredoxin  18 kklvlveFyAp.wCghCkalaPeleklaeelkdkvklakvdvdenedlakkyevegiPtlklfkngkevkkyegarekeklaafl 101
                  ++  +v Fy++  C+ C + +P + ++ +++++++++  v++d+ e l++ y+v+ +Pt++ f++ + + ky+g  +  +l +f 
   EPX72120.1 196 SERAFVMFYSTtKCTDCFQWEPIWLSITRDVANDLTMGYVNCDKDEALCAYYDVHEYPTFLAFQKLD-AVKYDGPLNYRELSRFA 279
                  3566788887526***********************************************9999888.77899998888887775 PP

  == domain 3  score: 6.5 bits;  conditional E-value: 0.0013
                  SHHHHHHTT-SSSSEEEEEETTE....EEEEEESS-HHHHHHHHH CS
  Thioredoxin  61 nedlakkyevegiPtlklfkngk....evkkyegarekeklaafl 101
                  ++ la+ky+v+++P+++ ++ng+    ++++    r++e++++++
   EPX72120.1 340 SAALARKYGVHALPAFVSVRNGEpfiyQANTPRQFRSHERIRNWI 384
                  6789******************96543333333335566666665 PP

>> Thioredoxin_6  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.7   0.0    0.0083        50      84     183 ..      33     127 ..      30     128 .. 0.72
   2 !    4.5   0.1    0.0047        28      18      75 ..     225     283 ..     218     323 .. 0.67
   3 !   20.1   0.0   8.1e-08   0.00049      21     108 ..     331     419 ..     313     434 .. 0.75
   4 ?   -1.9   0.0      0.46   2.8e+03      97     146 ..     454     506 ..     436     533 .. 0.61

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.0083
                    HHHHHHHHTSS--EEEEEEE-TTSTTHHHHHHHHHHHHHHTTTT-EEEEEETTGGHHHHHHTT--GGG-SEEEEEESSSS-EEEETTSS--HHHHH CS
  Thioredoxin_6  84 penaeelfeeglppllllflkkddeeteklkkaiekvakefkdkinfaladaksfkrpleylglsssdlPvivivdsashkykyppkdefspeklk 179
                    ++na  + e++ + ++++ ++++ e  ++l++  e+ ++++++ ++ a + ++   ++++  g++  + P+i+++ s   +  ++++  +s++++ 
     EPX72120.1  33 KHNASSILETQ-K-IWFVTFTETGEVFKDLSELWEATSTAYPN-LHHAKVLCDLEYDFCKSQGVH--EYPQIAVLRSGAWMRNVLDDSHHSVDSVL 123
                    67888888888.5.34444544444444444444555555555.777777777777788888888..9********9999**************** PP

                    HHHH CS
  Thioredoxin_6 180 eFlk 183
                    eF++
     EPX72120.1 124 EFIE 127
                    **96 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.0047
                    T-T.TSEEEEE--HH...HHHHTT--S.SEEEEEETTTTEEEEEETHT--HHHHHHHHHHH- CS
  Thioredoxin_6  18 elkgdvrfgvtkske...vadklgvke.pavllfrkfdeekvkydgekitvddlkkfiekns 75 
                    +  +d+++g+++ ++   ++  ++v+e p+ l f k d   vkydg  +++ +l++f ++  
     EPX72120.1 225 DVANDLTMGYVNCDKdeaLCAYYDVHEyPTFLAFQKLDA--VKYDGP-LNYRELSRFANQLA 283
                    4455555665542222348888*****9********666..699**6.9********98754 PP

  == domain 3  score: 20.1 bits;  conditional E-value: 8.1e-08
                    .TSEEEEE--HHHHHHTT--S.SEEEEEETTTTEEEEEETH...T-.-HHHHHHHHHHH---SEEE-SHHHHHHHHTSS--EEEEEEE-TTST CS
  Thioredoxin_6  21 gdvrfgvtkskevadklgvke.pavllfrkfdeekvkydge...ki.tvddlkkfieknslplvreltpenaeelfeeglppllllflkkdde 108
                    g    + + s+++a k+gv+  pa + +r+ +  +  y+ +   ++ + + + ++i ++slplv el+p n ++  + +l  +++l+ ++ +e
     EPX72120.1 331 GSAPLYQSDSAALARKYGVHAlPAFVSVRNGE--PFIYQANtprQFrSHERIRNWIHQASLPLVSELSPTNCHKMVNRQLS-VIALLNPE-SE 419
                    55566777788899999999999999999843..444555555744499******************************77.55555543.43 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 0.46
                    EEEEEEE-TTSTTHHHHHHHH.HHHH.HHTTTT-EEEEEETTGGHH.HHHHTT CS
  Thioredoxin_6  97 pllllflkkddeeteklkkai.ekva.kefkdkinfaladaksfkr.pleylg 146
                     + +l   k+++ ++k++++  + v+   f  ++ f++ d   ++  +l  lg
     EPX72120.1 454 KYTALTKAKRSKNEKKIQRIKySTVEhPVFTESVSFLWTDSSVWQTwLLTNLG 506
                    45555555555555555554224444344567788888888877764333444 PP

>> HyaE  Hydrogenase-1 expression protein HyaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0      0.99   5.9e+03      57      95 ..      71     107 ..      65     111 .. 0.71
   2 ?    1.8   0.0     0.037   2.2e+02      67      93 ..     236     261 ..     220     266 .. 0.79
   3 ?    6.5   0.0    0.0013         8      70      94 ..     338     362 ..     328     366 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 0.99
                 -TTS-EEEEEETHHHHHHHHHCCT-TSSSEEEEEETTEE CS
        HyaE  57 FpnalraavvadreqeealaerfgvlktPsllflrdgey 95 
                 +pn+ +a v+ d   e    +  gv  +P + +lr g++
  EPX72120.1  71 YPNLHHAKVLCD--LEYDFCKSQGVHEYPQIAVLRSGAW 107
                 556666666663..3445667789999999999999876 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.037
                 ETHHHHHHHHHCCT-TSSSEEEEEETT CS
        HyaE  67 adreqeealaerfgvlktPsllflrdg 93 
                 +  +++eal   + v  +P++l +++ 
  EPX72120.1 236 N-CDKDEALCAYYDVHEYPTFLAFQKL 261
                 4.678999**************99875 PP

  == domain 3  score: 6.5 bits;  conditional E-value: 0.0013
                 HHHHHHHHCCT-TSSSEEEEEETTE CS
        HyaE  70 eqeealaerfgvlktPsllflrdge 94 
                  +++ala+++gv   P+++ +r+ge
  EPX72120.1 338 SDSAALARKYGVHALPAFVSVRNGE 362
                 6899*****************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (629 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       922  (0.0514251); expected 358.6 (0.02)
Passed bias filter:                      609  (0.0339673); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.29s 00:00:00.95 Elapsed: 00:00:00.46
# Mc/sec: 4112.01
//
Query:       EPX72121.1  [L=325]
Description: mannosyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.5e-32  110.7   0.4    1.1e-31  110.3   0.4    1.0  1  Glyco_transf_15  Glycolipid 2-alpha-mannosyltransferase


Domain annotation for each model (and alignments):
>> Glyco_transf_15  Glycolipid 2-alpha-mannosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.3   0.4   6.2e-36   1.1e-31      48     302 ..      36     285 ..      16     298 .. 0.86

  Alignments for each domain:
  == domain 1  score: 110.3 bits;  conditional E-value: 6.2e-36
  Glyco_transf_15  48 rkPiedenenAtllalvrnselakilrsikkvekrFnkkfnYpyvfindepftekfkekieklveeadvefgeipkeewsyPefideekaakar 141
                      r P ++++ nA ll + ++ +l ++l++i++ve+r+nk+f+Yp++f + e +++ f e+++++ + ++ e+++  + e+      d+    +  
       EPX72121.1  36 RLP-QKTSLNASLLLFTEDGDLLDVLQTIRSVEDRWNKRFHYPWTFFSSEKLSSYFMEATSSVAS-GNCEYVQWDSTEYFGTGLKDTMYYLERS 127
                      334.45566**************************************************999999.********99999888888888777776 PP

  Glyco_transf_15 142 eelad..iaygdsesyrhmcRyysGlfykhellkkydyYwRvePdiklycdieyDvfkymkdekkiygFtlslkeieet.iktlWdstkkflke 232
                      e+l    ++y  s s++  + +    +  h++l +++y wR+eP++++ c+ e D f  m +++   gFt  + e+ ++ i +l +s     k 
       EPX72121.1 128 EKLSGegVKYSRSGSFHRYQEWILHSLLYHPQL-RFQYVWRLEPGLRFTCEEELDYFEEMAKHNATVGFTNHVCETRHSgILELEQS---LNKY 217
                      7766679****************9999999*99.5**************************************99987624455555...5555 PP

  Glyco_transf_15 233 nkefieeknslsflsdddqdtynlCeFwsnfeigdldffrse.ayekfFeylDskGgffYerWgdapvhsi 302
                      ++e + e+  + + + + +dty  C+F+   ei +l+ +r++    ++ ++l ++Gg++Y rW+++ + s 
       EPX72121.1 218 EQEGMPERPRTAW-EYSTEDTY--CKFLPYDEIISLKELRGNsSLVQLTQHLLNEGGIYYHRWTESDILSA 285
                      6677888899999.45666776..***************97626899*******************99775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (325 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       516  (0.0287802); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2403.77
//
Query:       EPX72122.1  [L=143]
Description: tRNA-splicing endonuclease subunit Sen15 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.6e-23   81.4   0.0    6.3e-23   81.0   0.0    1.1  1  Sen15     Sen15 protein
  ------ inclusion threshold ------
      0.097   12.9   0.1       0.21   11.8   0.0    1.6  2  Clr5      Clr5 domain


Domain annotation for each model (and alignments):
>> Sen15  Sen15 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.0   0.0     7e-27   6.3e-23       2     100 .]      27     140 ..      26     140 .. 0.91

  Alignments for each domain:
  == domain 1  score: 81.0 bits;  conditional E-value: 7e-27
       Sen15   2 vyldLleaknwtdveikeeeelk...lvllkGrpkkklsed..elvlPlelteklslekldkvfkelkeekse..........rkkrivLaivddDsTv 85 
                 v++dL  +++w +++i+  +  +   ++ll+G pk+ l ++  ++v+P+ l+e +s++ l+++f+++k ++            +++ i+L+iv++DsTv
  EPX72122.1  27 VETDLRLGQQWDELKIHIVHMYSeeeRPLLSGVPKTGLLQKklQYVFPVFLHEHVSIKMLSAIFDSMKTQNLLlaqderglsgKESYIYLGIVCSDSTV 125
                 89**************6665544566***********999999***********************997654488999********************* PP

       Sen15  86 vYYkvtdGlvkPkqn 100
                 vYYkvtdGl+kP+qn
  EPX72122.1 126 VYYKVTDGLMKPRQN 140
                 *************96 PP

>> Clr5  Clr5 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.4e-05      0.21       3      23 ..      35      55 ..      34      73 .. 0.92
   2 ?   -2.8   0.0      0.86   7.7e+03      22      32 ..      85      95 ..      74      97 .. 0.56

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.4e-05
        Clr5  3 edWeahkatIrrLYleenrsL 23
                ++W+++k  I+++Y ee+r+L
  EPX72122.1 35 QQWDELKIHIVHMYSEEERPL 55
                79*****************98 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.86
        Clr5 22 sLkdvmeiMee 32
                 L+ + + M++
  EPX72122.1 85 MLSAIFDSMKT 95
                35566666766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       304  (0.0169558); expected 358.6 (0.02)
Passed bias filter:                      272  (0.015171); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1015.13
//
Query:       EPX72123.1  [L=520]
Description: U3 snoRNP-associated protein Utp7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.5e-40  135.7   0.0    5.6e-37  125.4   0.0    3.2  3  BING4CT        BING4CT (NUC141) domain
    8.4e-07   29.6   0.3      0.012   16.5   0.0    4.5  6  WD40           WD domain, G-beta repeat
      2e-05   23.9   0.0    3.8e-05   22.9   0.0    1.4  1  Coatomer_WDAD  Coatomer WD associated region
    2.9e-05   24.3   0.4       0.77   10.1   0.0    4.6  5  ANAPC4_WD40    Anaphase-promoting complex subunit 4 WD40 doma
  ------ inclusion threshold ------
       0.11   11.9   0.0       0.23   10.8   0.0    1.5  2  WD40_like      WD40-like domain
       0.23   11.8   4.0        4.6    7.6   3.6    2.5  2  DUF3713        Protein of unknown function (DUF3713)


Domain annotation for each model (and alignments):
>> BING4CT  BING4CT (NUC141) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       1.1   3.2e+03      11      25 ..     183     197 ..     176     209 .. 0.76
   2 !    6.3   0.0    0.0027         8      11      48 ..     225     262 ..     217     276 .. 0.84
   3 !  125.4   0.0   1.9e-40   5.6e-37       1      78 [.     342     419 ..     342     420 .. 0.99

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 1.1
     BING4CT  11 kieslrFvpfeDvlg 25 
                  ++ l+F p++ +l+
  EPX72123.1 183 DVNALDFLPYHLLLT 197
                 688999999986664 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0027
     BING4CT  11 kieslrFvpfeDvlgvghskgissiivPGsGepnfdal 48 
                   + lr  p++ v  vgh++g  ++  P s +p +  l
  EPX72123.1 225 ACHVLRQNPYNAVEHVGHANGQVTLWAPSSTTPLVKML 262
                 56778889**********************99987665 PP

  == domain 3  score: 125.4 bits;  conditional E-value: 1.9e-40
     BING4CT   1 pYlthklpgskieslrFvpfeDvlgvghskgissiivPGsGepnfdaleanpfetkkqrrereVrsLLeKlqpelItl 78 
                 pY++h +p+s++ +l+++p+eD+lg+gh+kg++sii+PGsGepn+d++e++pf +kkqr+e+eVr+LLeKl+pe+I+l
  EPX72123.1 342 PYMNHLIPSSSVVDLHYCPYEDILGIGHDKGFESIIIPGSGEPNYDSYENDPFASKKQRQETEVRQLLEKLRPEMISL 419
                 8***************************************************************************98 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0         6   1.8e+04      19      34 ..     110     125 ..     106     129 .. 0.68
   2 ?    4.5   0.0     0.024        71      10      38 .]     140     169 ..     133     169 .. 0.78
   3 ?    2.5   0.0       0.1     3e+02       3      27 ..     174     198 ..     172     210 .. 0.81
   4 ?   -2.4   0.0       3.6   1.1e+04      25      37 ..     239     250 ..     219     250 .. 0.67
   5 !   16.5   0.0   3.9e-06     0.012       9      38 .]     263     293 ..     256     293 .. 0.88
   6 ?   -2.1   0.0       2.9   8.7e+03      11      31 ..     351     370 ..     342     372 .. 0.69

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 6
                 ETTSSEEEEEETTSEE CS
        WD40  19 spdgawlasGsdDgtv 34 
                  +dg++++ G+++g+v
  EPX72123.1 110 TRDGRMVLLGGRKGHV 125
                 5677775447778887 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.024
                 S.SS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  10 H.ss.vtslafspdgawlasGsdDgtvriWd 38 
                 H +  ++++++ ++++++a +  ++ v+++d
  EPX72123.1 140 HlQEtIRDVKWFHNHQYFAVAQ-KKYVYVYD 169
                 553349***********98655.99999987 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.1
                 EEEEEESSSSEEEEEEETTSSEEEE CS
        WD40   3 clrtltGHssvtslafspdgawlas 27 
                  ++ l+ H +v++l+f p++ +l+s
  EPX72123.1 174 EIHCLKRHIDVNALDFLPYHLLLTS 198
                 67888899559*******9999864 PP

  == domain 4  score: -2.4 bits;  conditional E-value: 3.6
                 EEEEETTSEEEEE CS
        WD40  25 lasGsdDgtvriW 37 
                 ++ G+ +g v +W
  EPX72123.1 239 HV-GHANGQVTLW 250
                 33.7677777777 PP

  == domain 5  score: 16.5 bits;  conditional E-value: 3.9e-06
                 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +H ++v+++a +++g+++++++ D   ++Wd
  EPX72123.1 263 THrGPVRDVAIDREGKYMVTAGADSLMKVWD 293
                 59899*************99988*******9 PP

  == domain 6  score: -2.1 bits;  conditional E-value: 2.9
                 SSEEEEEEETTSSEEEEEETT CS
        WD40  11 ssvtslafspdgawlasGsdD 31 
                 ssv +l ++p+ + l  G+ D
  EPX72123.1 351 SSVVDLHYCPYEDILGIGH-D 370
                 4588999999999873366.5 PP

>> Coatomer_WDAD  Coatomer WD associated region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.0   1.3e-08   3.8e-05     119     171 ..     117     169 ..     107     184 .. 0.90

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 1.3e-08
                    XXXXXXXX.XXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXX CS
  Coatomer_WDAD 119 lLgvksegsvsfYDweqgklvrridvkk.vknVvwsddgelvalvskdtvyils 171
                    lLg ++ + v+ +Dw +gkl+ ++++++ +++V w  + +++a+++k+ vy+++
     EPX72123.1 117 LLGGRKGH-VAAFDWRNGKLLTELHLQEtIRDVKWFHNHQYFAVAQKKYVYVYD 169
                    56666666.******************99**********************987 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.0   0.00026      0.77      45      90 ..     108     151 ..     105     153 .. 0.91
   2 ?    0.3   0.0      0.29   8.6e+02      38      79 ..     181     222 ..     159     241 .. 0.84
   3 !    6.2   0.0    0.0044        13      37      79 ..     264     306 ..     258     326 .. 0.86
   4 ?    0.2   0.0      0.32   9.5e+02       2      60 ..     357     372 ..     346     383 .. 0.64
   5 ?   -3.4   0.4       4.1   1.2e+04      19      42 ..     474     497 ..     470     498 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00026
  ANAPC4_WD40  45 aWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                   +  dg++   +  +g+v  +d  +gk++ +l+ +++  +  ++W 
   EPX72123.1 108 DYTRDGRMVLLGGRKGHVAAFDWRNGKLLTELHLQET--IRDVKWF 151
                  6889****************************99988..9999996 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.29
  ANAPC4_WD40  38 dsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvk 79 
                     v++L + p   lL    + g ++  d+++g++v + +++
   EPX72123.1 181 HIDVNALDFLPYHLLLTSIGNAGYLKYQDVSTGQLVAEHRTG 222
                  56788999999999999999999***********99887665 PP

  == domain 3  score: 6.2 bits;  conditional E-value: 0.0044
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvk 79 
                  + + vr++a   +gk ++ a +d+ +++ d  + k vhs+ + 
   EPX72123.1 264 HRGPVRDVAIDREGKYMVTAGADSLMKVWDLRNYKEVHSYYTP 306
                  567899********************************98654 PP

  == domain 4  score: 0.2 bits;  conditional E-value: 0.32
  ANAPC4_WD40   2 swcptmDLiAlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdg 60 
                  ++cp  D++                                            +++++g
   EPX72123.1 357 HYCPYEDILG-------------------------------------------IGHDKG 372
                  4555555555...........................................555444 PP

  == domain 5  score: -3.4 bits;  conditional E-value: 4.1
  ANAPC4_WD40  19 llvfRlngqrvwtleedkedsevr 42 
                  +   Rln ++  ++e++ ++++vr
   EPX72123.1 474 VDQRRLNVEKSLEVEKKMREKRVR 497
                  666899999999998888888876 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   7.5e-05      0.23       4     117 ..     105     216 ..     103     234 .. 0.77
   2 ?   -3.3   0.0       1.4   4.3e+03       6      36 ..     271     301 ..     267     303 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 7.5e-05
   WD40_like   4 YsidiskkgslilyGgkddkctvlkleslesvsivesfedSvifvklldddlilvvtlDGtillslleneeevenekieedistvkviddklliGtnkG 102
                 Y+ d+ ++g ++l Gg++ +++ ++ +++++ + + ++++ +  vk  +++++  v+   ++  +  +++ e++  k++ d+   + +  +ll+ t+ G
  EPX72123.1 105 YNFDYTRDGRMVLLGGRKGHVAAFDWRNGKLLTEL-HLQETIRDVKWFHNHQYFAVAQKKYVYVY-DNLGTEIHCLKRHIDVNALDFLPYHLLL-TSIG 200
                 99***************************999865.79***************999988888333.2556678888888888877777777766.4445 PP

   WD40_like 103 si.yvfskdlqleevl 117
                 +  y+  +d+++ +++
  EPX72123.1 201 NAgYLKYQDVSTGQLV 216
                 4413334555555555 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.4
   WD40_like   6 idiskkgslilyGgkddkctvlkleslesvs 36 
                 + i+++g++++  g d  ++v +l++ ++v 
  EPX72123.1 271 VAIDREGKYMVTAGADSLMKVWDLRNYKEVH 301
                 6788899999999999999999999988775 PP

>> DUF3713  Protein of unknown function (DUF3713)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   3.6    0.0015       4.6      11      62 ..       4      55 ..       1      62 [. 0.86
   2 ?    1.6   0.0      0.11   3.3e+02      42      63 ..     395     416 ..     385     427 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0015
     DUF3713 11 vkkkvkkeetttskeksvnklKtkdikvkklkdkkekvetkakslvekLkvt 62
                 k ++++ ++ t+k +   kl  k+ik+kkl+ + +k+e+ ++++ + L  t
  EPX72123.1  4 QKLNLDEVKAKTDKYSRGRKLNPKKIKDKKLRSNIQKIEERIENVETDLSKT 55
                5678889999999999999************************998887665 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.11
     DUF3713  42 kdkkekvetkakslvekLkvtt 63 
                 + kk+  et++ +l+ekL+++ 
  EPX72123.1 395 ASKKQRQETEVRQLLEKLRPEM 416
                 6789999***********9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (520 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1213  (0.0676558); expected 358.6 (0.02)
Passed bias filter:                      664  (0.037035); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.62u 0.27s 00:00:00.89 Elapsed: 00:00:00.41
# Mc/sec: 3771.17
//
Query:       EPX72124.1  [L=289]
Description: alpha SNAP [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.5e-103  345.4  15.4   2.8e-103  345.2  15.4    1.0  1  SNAP      Soluble NSF attachment protein, SNAP
  ------ inclusion threshold ------
      0.037   14.7  11.4        1.5    9.6   0.0    5.7  6  TPR_6     Tetratricopeptide repeat
        2.1    9.1  13.2        5.4    7.8   1.6    4.3  4  TPR_16    Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> SNAP  Soluble NSF attachment protein, SNAP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  345.2  15.4  4.8e-107  2.8e-103       2     282 .]       4     282 ..       3     282 .. 0.98

  Alignments for each domain:
  == domain 1  score: 345.2 bits;  conditional E-value: 4.8e-107
                 -HHHHHHHHHHHSS---THHHHH--SHHHHHHHHHHHHHHHHHHHHTT-THHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHT-HHHHHHHHHHH CS
        SNAP   2 kaeellakAekklksssglfslfgsksskaeeAadlyeqAAnayklakkweeAgeaflkaAecqeklkekdeaanayveAakcykkvspeeAvealekA 100
                 ++++l++kA kk+++ssg+  lfg+ + k+eeA++l+ +AAn y+l+k+ ++Ag af+kaAe+q k++ekd+aan+yveA+k+y++++p+eA+++l+ A
  EPX72124.1   4 DPDQLMQKAAKKANGSSGF-ALFGGGN-KYEEASELFLDAANGYRLQKQGSAAGFAFEKAAEMQLKTDEKDDAANTYVEAYKSYRREKPMEAARTLQIA 100
                 789***********99775.5**9955.*********************************************************************** PP

                 HHHHHHTT-HHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHTTSS-TTTGGGHHHHH CS
        SNAP 101 ieiytekgrfrraAklkkeiaelyekelgdlekAieaYekAaelyeqeeakalankcllkvAelsaelekyekAieiyekvakkslennllkysvkeyf 199
                 ++++t++g+frraA++k++++ l+e+el++ ++A+++Ye+A+e+y +++a+alank++lkvA+l+ + ++y+ Ai+ +e+va++s++n+llk+svk+y+
  EPX72124.1 101 VDLFTRRGNFRRAANYKMDLGTLFEQELQNPKAALASYEDAGEWYMSDQAEALANKAYLKVADLAGQAGEYPIAIQKFEDVARASVQNSLLKWSVKDYL 199
                 *************************************************************************************************** PP

                 HHHHHHHHHTT-HHHHHHHHHGGG-----------HHHHHHHHHHHHTT-TTTHHHHHHHHTTSS---HHHHHHHHHHHHHHH CS
        SNAP 200 lkaglcrLaagDvvaakralekyeeldpsFassrEakllkdlleaveegdvekfteavkefDkiskldkWkttlLlkiKksie 282
                 lkag c++a+gD +a++ alek++++dpsFa++rE++ll dl  ++e++d+++f+++v+ +D++skld+Wkt++Ll iK++i+
  EPX72124.1 200 LKAGFCYMAQGDEIATRSALEKFNQIDPSFATTREHQLLVDLQTSIESSDADMFASQVFTYDQLSKLDAWKTNILLLIKNNIQ 282
                 ********************************************************************************996 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.41   2.5e+03       8      24 ..      22      39 ..      20      46 .. 0.73
   2 ?    1.3   0.3      0.11   6.7e+02       5      26 ..      60      81 ..      56      87 .. 0.77
   3 ?    0.8   0.1      0.16   9.6e+02       9      28 ..      84     102 ..      80     104 .. 0.77
   4 ?    1.1   0.0      0.13   7.8e+02       6      25 ..     120     140 ..     118     143 .. 0.83
   5 ?    3.7   0.1     0.019   1.1e+02       2      27 ..     157     182 ..     156     184 .. 0.91
   6 ?    9.6   0.0   0.00025       1.5       2      30 ..     198     226 ..     197     228 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.41
                HHHHH.HHHHHHHHHHHH CS
       TPR_6  8 lsyrk.lgdtdkAleale 24
                 +++  ++++++A e++ 
  EPX72124.1 22 FALFGgGNKYEEASELFL 39
                566764569****99985 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.11
                HHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6  5 klalsyrklgdtdkAlealerl 26
                k+a+ ++k++++d+A  ++ + 
  EPX72124.1 60 KAAEMQLKTDEKDDAANTYVEA 81
                7899999999999999988655 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.16
                 HHHHHHHHHHHHHHHHHHHH CS
       TPR_6   9 syrklgdtdkAlealerlik 28 
                 syr+  ++ +A ++l+  ++
  EPX72124.1  84 SYRRE-KPMEAARTLQIAVD 102
                 88988.77788888887776 PP

  == domain 4  score: 1.1 bits;  conditional E-value: 0.13
                 HHHHHHH.HHHHHHHHHHHHH CS
       TPR_6   6 lalsyrk.lgdtdkAlealer 25 
                 l+ ++++ l+++ +Al+ +e+
  EPX72124.1 120 LGTLFEQeLQNPKAALASYED 140
                 6888887789*******9996 PP

  == domain 5  score: 3.7 bits;  conditional E-value: 0.019
                 HHHHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   2 AlyklalsyrklgdtdkAlealerli 27 
                 A++k a +  ++g++  A++ +e++ 
  EPX72124.1 157 AYLKVADLAGQAGEYPIAIQKFEDVA 182
                 899********99**********986 PP

  == domain 6  score: 9.6 bits;  conditional E-value: 0.00025
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH- CS
       TPR_6   2 AlyklalsyrklgdtdkAlealerlikeY 30 
                  l+k++ +y ++gd  + + ale++ +  
  EPX72124.1 198 YLLKAGFCYMAQGDEIATRSALEKFNQID 226
                 59*********************996655 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.5      0.21   1.3e+03      43      54 ..      64      75 ..      23      85 .. 0.49
   2 ?    7.8   1.6    0.0009       5.4       8      60 ..      85     141 ..      78     144 .. 0.82
   3 ?    5.7   0.3     0.004        24       2      26 ..     160     184 ..     147     189 .. 0.58
   4 ?    6.2   0.1    0.0028        17       2      47 ..     160     209 ..     159     212 .. 0.70

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.21
      TPR_16 43 aalrqgrlaeAa 54
                + l+  + ++Aa
  EPX72124.1 64 MQLKTDEKDDAA 75
                333333333444 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0009
      TPR_16   8 lragdyddAaaaleaalkrdpssPd.....aaeAllllgdaal.rqgrlaeAaalyraa 60 
                 +r+ ++ +Aa+ l++a++++    +     aa   + lg ++  ++++ ++A+a y+ a
  EPX72124.1  85 YRREKPMEAARTLQIAVDLFT--RRgnfrrAANYKMDLGTLFEqELQNPKAALASYEDA 141
                 7899**************993..446688899999999999995558888888888765 PP

  == domain 3  score: 5.7 bits;  conditional E-value: 0.004
      TPR_16   2 alaraalragdyddAaaaleaalkr 26 
                 + a++a +ag+y+ A+  +e + ++
  EPX72124.1 160 KVADLAGQAGEYPIAIQKFEDVARA 184
                 3455555555555555555555443 PP

  == domain 4  score: 6.2 bits;  conditional E-value: 0.0028
      TPR_16   2 alaraalragdyddAaaaleaalkrdpssPd....aaeAllllgdaalrq 47 
                 + a++a +ag+y+ A+  +e + ++    ++      + ll  g ++ +q
  EPX72124.1 160 KVADLAGQAGEYPIAIQKFEDVARASVQNSLlkwsVKDYLLKAGFCYMAQ 209
                 6799****************999987333335555555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       520  (0.0290033); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.30s 00:00:00.78 Elapsed: 00:00:00.47
# Mc/sec: 1852.79
//
Query:       EPX72125.1  [L=508]
Description: beta-fructofuranosidase-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.2e-95  319.2   0.5    3.9e-95  318.9   0.5    1.1  1  Glyco_hydro_32N  Glycosyl hydrolases family 32 N-terminal dom
    2.4e-11   43.9   0.0    4.9e-11   42.9   0.0    1.4  1  Glyco_hydro_32C  Glycosyl hydrolases family 32 C terminal


Domain annotation for each model (and alignments):
>> Glyco_hydro_32N  Glycosyl hydrolases family 32 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  318.9   0.5   4.3e-99   3.9e-95       1     295 [.       8     316 ..       8     328 .. 0.93

  Alignments for each domain:
  == domain 1  score: 318.9 bits;  conditional E-value: 4.3e-99
                      SB--SSEEEEEEEEEEECTTEEEEEEEEETTSSSS-SBEEEEEEESSSSSBEEEEEEE-SSSGGCTTEEEEEEEEE-TT-.............. CS
  Glyco_hydro_32N   1 HfqppkgwlNDPnglvyykgeYhlFYqynpkgavwgnisWghavSkDlvhWeelpvalapdeefdsngafSGsavvdddk.............. 80 
                      Hf+p++g++NDPnglv+ +g +hlFYq+np+g++ gn +Wgha S++l +W++lpval+p+e  d   +fSGsav+d+d+              
       EPX72125.1   8 HFTPQEGFMNDPNGLVQSNGLWHLFYQWNPTGMEAGNQHWGHAISRNLYNWNHLPVALYPNE--DGGLMFSGSAVIDKDNtsgffkdshgript 99 
                      *************************************************************7..6668***********99************* PP

                      .....EEEEEEEE-TCSEEEEEEEEESSTTSSEEE-TT--SB-.-TTTSTTSEEEEEEEEETT.TEEEEEEEECCTTCCEEEEEEESSSSSEEE CS
  Glyco_hydro_32N  81 .....lvllYTgnvkeeeqvQnlayskdkgreftkyeenpviaekpeentkhfRDPkvawked.gkwvmvvgaqdkkkgkillYkskdlkewel 168
                           +vl+YT ++++ +++Qn+ays+d g++f kye+np+i+     n+++fRDPkv+w+ed ++wvmvv+  +  k +i++++s++lk+we+
       EPX72125.1 100 ntdgrIVLIYTTHYDD-RETQNIAYSQDGGITFIKYENNPIIDL----NESQFRDPKVFWHEDtKHWVMVVALAQ--KFRIAIFRSSNLKNWEK 186
                      *************987.9************************97....899***********88***********..9**************** PP

                      ECCESEECC.TTTEEEEEEEEEEECS.TT-ECEEEEEEEEC.STTTTTTEEEEEEEEEETTTTEEEECCCCCEESBSSSS-EEEEEECCTTT.C CS
  Glyco_hydro_32N 169 aselleskkekggmwEcpdlfeldek.deeekvklvlkvspqgledntsqdyyfigkfdaekkkftadeeelkelDyGkdfYAsqtfededk.r 260
                      +se+  +    g ++Ecpdlf+l+ + +e+++++lv++v+p ++ +++s ++yfig+f  ++ +ft+ +++++ +D+G+dfYAsqtf++  + +
       EPX72125.1 187 VSEFGPAGI-LGSQYECPDLFRLPIEnTEDHRWVLVVSVNPGSPINGGSITQYFIGEF--DGITFTPIDKTARIFDHGNDFYASQTFSNVLNnQ 277
                      *******98.8*************9944567799999999977779************..8****9999********************7666* PP

                      EEEEEEES-TTTHCCCCC.CTEE-EE--EEEEEE.....S CS
  Glyco_hydro_32N 261 riligWmgewdseeadvpekgwagalslpReltl.....k 295
                       i +gW+++w++ +++vp+++++g+l++pRel+l     +
       EPX72125.1 278 VISMGWASNWSY-ANKVPAEKYRGMLTCPRELSLrsmplN 316
                      ************.6********************554441 PP

>> Glyco_hydro_32C  Glycosyl hydrolases family 32 C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.9   0.0   5.4e-15   4.9e-11      54     134 ..     391     473 ..     347     485 .. 0.82

  Alignments for each domain:
  == domain 1  score: 42.9 bits;  conditional E-value: 5.4e-15
                      EEES..SS--EEEEEETTTTEEEEE-TTSG...GTTT----.EEEE---.....-..EEEEEEEETTEEEEEET.TTEEEEEE--.. CS
  Glyco_hydro_32C  54 vlasedleeettiyydpsrsslvvdRtksgetdfkndfasg.esaplel...dgk..lkLrilvDkssvEvFvndGrtaiTsrvyPt 134
                      vl+s   ++++ ++y++s + +++dR  + et+ k+ + s+ +  +l++   d+k  ++L il+D+s+vEv++n+G  ++T++   +
       EPX72125.1 391 VLNS---KQYVELGYRFSDGAVYIDRGSC-ETSWKDPMYSErSVSNLPPiviDDKlmVDLGILMDHSIVEVYGNHGGKVFTNTYRFS 473
                      4455...469*******************.6666755555559999999***55546*************************87655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (508 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       361  (0.020135); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.21s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 3551.32
//
Query:       EPX72126.1  [L=271]
Description: 14-3-3 family protein Rad24 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.4e-104  348.5   6.3   1.6e-104  348.3   6.3    1.0  1  14-3-3    14-3-3 protein
  ------ inclusion threshold ------
      0.033   14.7   0.5       0.65   10.5   0.1    2.8  3  DUF3802   Protein of unknown function (DUF3802)
       0.95    9.7   5.8        0.8   10.0   0.4    2.7  3  MCM6_C    MCM6 C-terminal winged-helix domain


Domain annotation for each model (and alignments):
>> 14-3-3  14-3-3 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  348.3   6.3  2.7e-108  1.6e-104       1     222 []      12     234 ..      12     234 .. 0.99

  Alignments for each domain:
  == domain 1  score: 348.3 bits;  conditional E-value: 2.7e-108
                 HHHHHHHCCHHHHHHHHHCHHHHCSS---HCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCTCC.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC CS
      14-3-3   1 laklaeqaeryddmveymkkvvelkeeLskeernlLsvayKnvvgarRaswrvlssieqkeeske.ekkvelikeyrekiekeLkeiceevlelldktl 98 
                 laklaeqaery+ mve mk+v+++++eL++eernlLsvayKnv+garRaswr++ssieqkeesk+ +++velikeyr+kie+eL++ic+++l++l+k+l
  EPX72126.1  12 LAKLAEQAERYEGMVENMKSVASTDQELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKGnTAQVELIKEYRHKIEQELDTICQDILTVLEKHL 110
                 69**************************************************************99999****************************** PP

                 HCH.-SHHHHHHHHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHTTTGCC-HHHHHHHHHHHHHHHCTT--HHHHHHHHHHHHHCCHCCCC CS
      14-3-3  99 ipkatseeskvfylkmkgDyyRYlaEfaegeekkeaaekakeaYeeAleiakkelqpthpirLglaLNySVflyeilnspekAcelakkafdeaiaeld 197
                 ip+a s+eskvfy+kmkgDyyRYlaEfa g+++k++a+++ e Y++A+e a++el+pthpirLglaLN+SVf+yeilnsp++Ac lak+afdeai+eld
  EPX72126.1 111 IPNAASAESKVFYYKMKGDYYRYLAEFAVGDKRKHSADQSLEGYKAASESAQAELAPTHPIRLGLALNFSVFYYEILNSPDRACYLAKQAFDEAISELD 209
                 **9************************************************************************************************ PP

                 CS.TTTHHHHHHHHHHHHHHHHHHC CS
      14-3-3 198 elseesykdstlilqlLrdnltlWt 222
                 +lseesykdstli+qlLrdnltlWt
  EPX72126.1 210 SLSEESYKDSTLIMQLLRDNLTLWT 234
                 ************************8 PP

>> DUF3802  Protein of unknown function (DUF3802)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.12     7e+02      42      65 ..      24      47 ..       7      57 .. 0.85
   2 ?   10.5   0.1   0.00011      0.65      54      95 ..      80     122 ..      63     128 .. 0.85
   3 ?   -1.3   0.0       0.5     3e+03      11      31 ..     222     242 ..     211     258 .. 0.71

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.12
     DUF3802 42 qlaenlivvceqnpeLskeqRlkv 65
                 ++en+  v + ++eL+ e+R+ +
  EPX72126.1 24 GMVENMKSVASTDQELTVEERNLL 47
                46889999999999**99999865 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00011
     DUF3802  54 npeLskeqRlkvvrevDaivaDLeevLak.vlnkkateeqeaF 95 
                 ++eL ke R k+ +e D+i +D+  vL k  + ++a++e ++F
  EPX72126.1  80 QVELIKEYRHKIEQELDTICQDILTVLEKhLIPNAASAESKVF 122
                 67999**********************8724566677777777 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 0.5
     DUF3802  11 lieyltenLalFekssekata 31 
                 +++ l +nL+l++++ e ++a
  EPX72126.1 222 IMQLLRDNLTLWTSDAEYNAA 242
                 457788999999988776554 PP

>> MCM6_C  MCM6 C-terminal winged-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1      0.54   3.3e+03      42      76 ..      11      46 ..       9      54 .. 0.58
   2 ?   10.0   0.4   0.00013       0.8      16      52 ..      63      97 ..      58     105 .. 0.88
   3 ?    1.6   0.0     0.052   3.1e+02      42      89 ..     195     244 ..     193     265 .. 0.64

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.54
      MCM6_C 42 YleqieeeleseeeleeekklvekvlkrLvk.dkvL 76
                Yl + +e+ e  e + e++k v +  + L   ++ L
  EPX72126.1 11 YLAKLAEQAERYEGMVENMKSVASTDQELTVeERNL 46
                666666666666666666666655544444434444 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00013
      MCM6_C 16 llvlklreeeeeeeeegiekeeLvewYleqieeeles 52
                 +v  ++++ee+  +    + eL++ Y ++ie+el++
  EPX72126.1 63 RIVSSIEQKEES--KGNTAQVELIKEYRHKIEQELDT 97
                589999999999..7888999*************998 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.052
      MCM6_C  42 Yleqieee..leseeeleeekklvekvlkrLvkdkvLlevreeaeeseee 89 
                 Yl +++ +  +++ + l+ee       + +L++d+  l  ++++ +++++
  EPX72126.1 195 YLAKQAFDeaISELDSLSEESYKDSTLIMQLLRDNLTLWTSDAEYNAAAA 244
                 55544432348889999999999999999999977655555444443332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (271 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       895  (0.0499191); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.29s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 1790.97
//
Query:       EPX72127.1  [L=335]
Description: RecA family ATPase Dmc1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   6.6e-109  363.1   0.0   8.9e-109  362.7   0.0    1.2  1  Rad51     Rad51
    3.3e-14   53.0   0.1    4.7e-14   52.5   0.1    1.1  1  RecA      recA bacterial DNA recombination protein
    3.1e-07   30.2   0.0    5.1e-07   29.5   0.0    1.2  1  AAA_25    AAA domain
    0.00057   19.3   0.4     0.0013   18.1   0.4    1.6  1  ATPase    KaiC
    0.00082   19.9   0.0     0.0022   18.5   0.0    1.8  1  HHH_5     Helix-hairpin-helix domain
       0.01   15.2   0.2       0.19   11.0   0.0    2.2  2  NRD1_2    NrpR regulatory domains NRD1 and 2
  ------ inclusion threshold ------
      0.044   13.5   0.0      0.074   12.8   0.0    1.4  1  AAA_24    AAA domain


Domain annotation for each model (and alignments):
>> Rad51  Rad51
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  362.7   0.0  3.5e-112  8.9e-109       2     254 ..      81     333 ..      80     334 .. 0.99

  Alignments for each domain:
  == domain 1  score: 362.7 bits;  conditional E-value: 3.5e-112
                 S-EBHHHHHHHHHSS-EE--S-HHHHHHHTSSEESSSEEEEEESTTSSHHHHHHHHHHHTTS-TTTS--SSEEEEEESSS---GGGGHHHHHHTT--HH CS
       Rad51   2 gfvsavellekrsellqlttGskklDelLgGGietgsiteifGefrsGktqlchtlcvtvqlplelgGgegkavyidtegtfrperlveiaerykldke 100
                 +f +a+e+ ++r+++ +++tGs++l+ +LgGGi+++site+fGefr+Gktq++htlcv++qlp ++gG+egk+++idtegtfrp+r+ +iaery+ld++
  EPX72127.1  81 NFATAMEISQNRKRVWSISTGSEALNGILGGGIQSMSITEVFGEFRCGKTQMSHTLCVAAQLPRDMGGAEGKVAFIDTEGTFRPDRIKAIAERYGLDPD 179
                 699************************************************************************************************ PP

                 HHGGGEEEEE--STTHHHHHHHHTHHHHHHS.-EEEEEEETTTGGGCH-------THHHHHHHHHHHHHHHHHHHHH--EEEEEEE-------.----- CS
       Rad51 101 evlenvayaRaytiehqeellqqaaallaed.kfallivDsvtalyRtdfsgrgelakRqqklgkllrtLrkladefevavvitnqvvaqvdgqaalfs 198
                 +++en+ + Ray++e+q++ ++++a+ +aed +++llivDs++al+R+d+sgrgel++Rqqkl+ +l +L+++++ef+vav++tnqv+a++++ a +f+
  EPX72127.1 180 QTMENIIVSRAYNSEQQMDYITKLATIFAEDgQYRLLIVDSIMALFRVDYSGRGELSERQQKLNIMLARLNHISEEFNVAVFVTNQVQADPGA-ALMFA 277
                 ***************************998759**********************************************************99.***** PP

                 -------HHHHHHHH-SEEEEEEE-STTEEEEEEES-SSS-S-EEEEEEETTEEE- CS
       Rad51 199 adpkkPigGlvlahasttRlalrkgkgeeRivkvvdsPnlpeleavfaigeeGied 254
                 ++ +kP+gG+v+ahas+tRl lrkg+geeR++k+ dsP++pe+e+ + i+  Gi d
  EPX72127.1 278 SNDRKPVGGHVMAHASATRLLLRKGRGEERVAKLNDSPDMPEAECSYIITPGGIAD 333
                 ******************************************************98 PP

>> RecA  recA bacterial DNA recombination protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.5   0.1   1.8e-17   4.7e-14      20     222 ..      86     302 ..      72     313 .. 0.75

  Alignments for each domain:
  == domain 1  score: 52.5 bits;  conditional E-value: 1.8e-17
                 --TTS--.-----EE--S-HHHHHHTSSSSEETTSEEEEEESTTSSHHHHHHHHHHHHH..H....TT--EEEEESS----HH....HHHHTT--.... CS
        RecA  20 mklgdekeklkvetissGslaldialGiGGlpkGriieiyGpessGkttlalhaiaeaq..k....kggvaafidaehaldpk....yakklGvd.... 104
                 m++ +  ++++v +is+Gs al+  lG GG+    i+e++G    Gkt ++  + + aq  +    + g +afid+e ++ p+     a++ G+d    
  EPX72127.1  86 MEISQ--NRKRVWSISTGSEALNGILG-GGIQSMSITEVFGEFRCGKTQMSHTLCVAAQlpRdmggAEGKVAFIDTEGTFRPDrikaIAERYGLDpdqt 181
                 55644..4589****************.********************99755444444223222256789********99862222567789985555 PP

                 GGG-EEE--SSHHHHHHHHHHH....HTTT--SEEEEE-TTT---ST.T-----------HHHHHHHHHHHHHHHHHTTT--EEEEEEE------..-- CS
        RecA 105 idellvsqpdtGeqaleiadal....vrsgaidlivvdsvaalvpka.eieGemgdskvglqarlmsqalrkltgaisksntvvifinqirekiG..vm 196
                 +++++vs+  + eq ++ + +l     + g   l++vds+ al   +    Ge+++ +  l+  +m   l +l+   ++ n++v   nq++   G  +m
  EPX72127.1 182 MENIIVSRAYNSEQQMDYITKLatifAEDGQYRLLIVDSIMALFRVDySGRGELSERQQKLN--IM---LARLNHISEEFNVAVFVTNQVQADPGaaLM 275
                 7899************98776611115678888*********98543144677777665554..45...556666667778888889****98774479 PP

                 ------.---HHHHHHH-SEEEEEEEE CS
        RecA 197 fgnpet.ttGGralkfyasvrldvrri 222
                 f + +    GG+ +   ++ rl +r+ 
  EPX72127.1 276 FASNDRkPVGGHVMAHASATRLLLRKG 302
                 986665156999999999999999875 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.5   0.0     2e-10   5.1e-07      19     189 ..     102     266 ..      86     270 .. 0.78

  Alignments for each domain:
  == domain 1  score: 29.5 bits;  conditional E-value: 2e-10
      AAA_25  19 ppprrwlvkgllpagelallaGapgtGKttlaldlalavatGkpwlgpvapeqgkVlyvsaEdsedelrrRlravgealrddarllvldlagveslpLf 117
                  + ++ +++g +   +++ ++G   +GKt +   l++a  + +   g      gkV ++++E++    + R++a+ e + +d + +       +++ ++
  EPX72127.1 102 SEALNGILGGGIQSMSITEVFGEFRCGKTQMSHTLCVAAQLPRDMGG----AEGKVAFIDTEGTF--RPDRIKAIAERYGLDPDQT-------MENIIV 187
                 5678888999999999999***********99999888887776544....89***********8..79*******9993322222.......233444 PP

      AAA_25 118 akdrggtlltadvdaleaaieevegvrlvviDplsralggdensnsd.......vgalvealeriarrtgaavllvhHv 189
                 +   ++++    + +l+    e  ++rl+++D++ ++++ d     +        + ++++l++i++++++av+++ +v
  EPX72127.1 188 SRAYNSEQQMDYITKLATIFAEDGQYRLLIVDSIMALFRVDYSGRGElserqqkLNIMLARLNHISEEFNVAVFVTNQV 266
                 4444444444567889999999888*************99555554444444556*******************99776 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.4   5.1e-07    0.0013       1     131 [.      98     224 ..      98     276 .. 0.75

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 5.1e-07
      ATPase   1 vktgIeglDeilkgGipegrvvlitGepGtGKtifalqFlikga.....ekygepgvfvtveepa..edlrenakslGwdlekleeegklaiidasesa 92 
                 ++tg e l  il gGi + +++ + Ge  +GKt ++ +  +           + ++ f+ +e +     ++  a++ G d ++  e+  +++  a++s+
  EPX72127.1  98 ISTGSEALNGILGGGIQSMSITEVFGEFRCGKTQMSHTLCVAAQlprdmGGAEGKVAFIDTEGTFrpDRIKAIAERYGLDPDQTMEN--IIVSRAYNSE 194
                 57999*******************************998876431100033456889999998755599999999999999999999..6666666664 PP

      ATPase  93 eesaeekdkedleelieelaeaikeika.krvviDsitgl 131
                 ++          +  i++la++ +e ++ + +++Dsi +l
  EPX72127.1 195 QQ----------MDYITKLATIFAEDGQyRLLIVDSIMAL 224
                 43..........4556667777666665366788999887 PP

>> HHH_5  Helix-hairpin-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   8.7e-07    0.0022       8      56 ..      27      75 ..      18      76 .. 0.90

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 8.7e-07
                TT--HHHHHHHHTTT--SHHHHHHS-HHHHHTSTTS-HHHHHHHHHHHH CS
       HHH_5  8 sGiGpktAlallsaGiesvedlaaadveeLakipGiGkktAeriilelk 56
                 GiG  ++++l   Gi++v+ +   ++  L ki+G+++ +++++++++ 
  EPX72127.1 27 HGIGMTDIVRLKQSGICTVQGVHMSTKRFLLKIKGFSEAKVDKLKEAAS 75
                59*******************88888888*****************986 PP

>> NRD1_2  NrpR regulatory domains NRD1 and 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.0   7.3e-05      0.19     138     216 ..      43     120 ..      18     127 .. 0.89
   2 ?    2.1   0.0     0.039        99       6      46 ..     165     205 ..     161     222 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 7.3e-05
                 .......--SSSEEEEEEEEEETTTHHHHHHHHHHH...T-TTEEEE--TT--BTTB---TTEEEEEEE-TTHHHHHHH CS
      NRD1_2 138 TsvlevietgegkilAnlReipvsarekveeileklkkagisgvleigepneevlgvpveeekvgivvvgGlnpiaalk 216
                 + v  v +  +++ l +++ +  ++ +k++e  +k+   ++   +ei++++++v  ++  +e ++ ++ gG+  + + +
  EPX72127.1  43 CTVQGV-HMSTKRFLLKIKGFSEAKVDKLKEAASKMCPVNFATAMEISQNRKRVWSISTGSEALNGILGGGIQSMSITE 120
                 555553.5667888999*******************************************************9998765 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.039
                 HHHHHHHCC---BTTTTB-EEEEEEEEEEGGGHHHHHHHHH CS
      NRD1_2   6 skieelaykvtfdpetgkGkVivNlslidkedleealeilk 46 
                 ++i+ +a +  +dp++  +++iv  ++ ++++++ ++++ +
  EPX72127.1 165 DRIKAIAERYGLDPDQTMENIIVSRAYNSEQQMDYITKLAT 205
                 68999999999*****************9999998887655 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   2.9e-05     0.074       7      79 ..     121     226 ..     118     262 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2.9e-05
      AAA_24   7 iyGpsgiGKTtlakel.............gpkplfidtekGlksldadkfpdie....................swedfldevvel...aaeladyktl 69 
                 ++G+   GKT +  +l             + k++fidte+      +d+++ i                     + e+ +d++++l    ae+ +y+ l
  EPX72127.1 121 VFGEFRCGKTQMSHTLcvaaqlprdmggaEGKVAFIDTEG---TFRPDRIKAIAerygldpdqtmeniivsrayNSEQQMDYITKLatiFAEDGQYRLL 216
                 789999**********************************...569999999999999*999988888888877555555555555666667778**** PP

      AAA_24  70 viDtidelee 79 
                 ++D+i  l +
  EPX72127.1 217 IVDSIMALFR 226
                 *****88866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (335 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       682  (0.0380389); expected 358.6 (0.02)
Passed bias filter:                      614  (0.0342462); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.44
# Mc/sec: 2267.39
//
Query:       EPX72128.1  [L=224]
Description: phospholipase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.6e-69  231.7   0.1      1e-68  231.4   0.1    1.0  1  Abhydrolase_2  Phospholipase/Carboxylesterase
    5.1e-05   23.1   0.7    0.00034   20.3   0.7    2.1  1  Abhydrolase_1  alpha/beta hydrolase fold
     0.0013   19.3   0.0     0.0019   18.8   0.0    1.3  1  Abhydrolase_6  Alpha/beta hydrolase family
     0.0059   15.7   0.0      0.011   14.8   0.0    1.5  1  DUF1749        Protein of unknown function (DUF1749)
  ------ inclusion threshold ------
      0.028   14.0   0.4      0.032   13.9   0.4    1.3  1  Esterase       Putative esterase
      0.069   12.4   0.5         11    5.2   0.1    2.6  2  Hydrolase_4    Serine aminopeptidase, S33
       0.15   11.5   0.0       0.22   11.0   0.0    1.2  1  Esterase_phd   Esterase PHB depolymerase


Domain annotation for each model (and alignments):
>> Abhydrolase_2  Phospholipase/Carboxylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  231.4   0.1     4e-72     1e-68       4     212 ..       7     216 ..       5     221 .. 0.98

  Alignments for each domain:
  == domain 1  score: 231.4 bits;  conditional E-value: 4e-72
                    EEEE--SS---EEEEEE--TT--SHHHHHHHH.TT--TTEEEEEE---EEE-GGGTT-EEE-SS-B--SSTTS-B-HHHHHHHHHHHHHHHHHHHH CS
  Abhydrolase_2   4 aevvspkdkaqavviflHGlGdsghawaeaakteaalpnikfifphgpelpvtlnggmrmpaWfdlvglspekkedeagikksaekleelidaelk 99 
                    +++++p   ++a+viflHGlGdsgh+w+++a+ +  + ++k+ifp++p  pvt+n++ +mp+Wfd++++++ +k+de+gi + ++ ++ lidae++
     EPX72128.1   7 SAIINPTLTHKATVIFLHGLGDSGHGWSFMAEQFKSMGHVKWIFPNAPIAPVTANNNFKMPSWFDIYSFNNLNKQDEEGILNCVNIIHHLIDAEIA 102
                    689********************************************************************************************* PP

                    TT--GGGEEEEEETHHHHHHHHHHHT-SS--SEEEEES---TTGGGTTTTS-GGGGG-EEEEEEETT-SSS-HHHHHHHHHHHHTTS-.GEEEEEE CS
  Abhydrolase_2 100 kgipssriiigGFSqGaalalylaltlpkklggivafsgalplsqklessatavtkklpilqiHgeeDpvvplalgkaakevlkkllk.kvelksy 194
                    +gi s++i+igGFSqG++ +l ++lt+pk+l+gi+++sg+lpl+ k+++s +  ++ +pi++ +++ Dp++p al++a++e++k+ l  k+  k y
     EPX72128.1 103 AGISSDKILIGGFSQGCMASLFAGLTYPKRLAGIMGHSGFLPLEHKFPESLSSFARSIPIFLAYMNNDPIIPRALASASAEYMKQKLLlKCMDKLY 198
                    ***********************************************************************************998888******* PP

                    TT--SS--HHHHHHHHHH CS
  Abhydrolase_2 195 eglaHsideeemqdikef 212
                     g +Hs  +e++ d+++f
     EPX72128.1 199 DGDMHSPTPESFLDMYKF 216
                    ****************99 PP

>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.7   1.3e-07   0.00034       2     149 ..      19     185 ..      18     214 .. 0.71

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 1.3e-07
                    EEEEE-STTTCGGG.................GTTGHHHHHHHHT.................TSEEEEEEETTSTTSSSTTTGB.CHHSHHHHHHHH CS
  Abhydrolase_1   2 vlvilhGlpgssdv.................waerglapaLakd.................gfdvillDlrGvgySspapacinddygtasvaddl 63 
                    ++++lhGl++s++                  +                              fd++ ++ ++    +  ++c+n    +  +   +
     EPX72128.1  19 TVIFLHGLGDSGHGwsfmaeqfksmghvkwiF-----------PnapiapvtannnfkmpsWFDIYSFNNLNKQDEEGILNCVN----I--IHHLI 97 
                    58999999998888445555555555555552...........03333333444477779999999999999999999999965....5..67788 PP

                    H.HHHHHCTTSSEEEEEETHHHHHHHHHHHHHGGGEEEEEEESE.CSSCCHHHHHHHHHHHHHHCHHCHHHHHHHHHHHHHHHHCCSC CS
  Abhydrolase_1  64 d.rildalgddkltlvGhSmGGmialayaaeyperVkalvllga.idpaaslieaqrqqaksfpdffdgyaadcarnpagplladela 149
                    d  i +    dk+ + G+S+G+m +l + + yp+r ++++  ++ ++  +++ e     a s p f+  + +d   ++a  +++ e+ 
     EPX72128.1  98 DaEIAAGISSDKILIGGFSQGCMASLFAGLTYPKRLAGIMGHSGfLPLEHKFPESLSSFARSIPIFLAYMNNDPIIPRALASASAEYM 185
                    888899*************************************986666666666666666665555555555555555555555555 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   7.4e-07    0.0019       1     105 [.      20     156 ..      20     219 .. 0.53

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 7.4e-07
                    EEEE--GC.....G....C.HHHHHHHHCCT..C...EEEEE--TTST...S-GGCS--HHHC...........HHH.HHHHCCTT.....TTSEE CS
  Abhydrolase_6   1 vlllHGagssassW....l.vapLaallaag..v...hvlapDlpGhG...rsdpppldledl...........adl.aalldelaa...gggpvv 68 
                    v++lHG+g s+++W      + ++    ++   +   +++ap   ++    +s+ + +++++l           + + ++l+d+++a   + +++ 
     EPX72128.1  20 VIFLHGLGDSGHGWsfmaEqFKSM----GHVkwIfpnAPIAPVTANNNfkmPSWFDIYSFNNLnkqdeegilncVNIiHHLIDAEIAagiSSDKIL 111
                    79********99995322122233....333542222444444444433345788889998856655555544433355555555558999999** PP

                    EEEETCHHHHHHHHHHCC.......EEEEES-..----TTT........S CS
  Abhydrolase_6  69 lvGHSlGGalalaaapla.....lvvgvlldppptalpagl........l 105
                    + G S+G++ +l+   +      +++g++  +  ++lp+          +
     EPX72128.1 112 IGGFSQGCMASLF---AGltypkRLAGIMGHS--GFLPLEHkfpeslssF 156
                    *********8888...4444478777777777..2222222322222221 PP

>> DUF1749  Protein of unknown function (DUF1749)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   4.4e-06     0.011      29     118 ..      16     121 ..       6     139 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 4.4e-06
     DUF1749  29 kskallFigGLgdGlltvpyvkelanaldeagwsv........v...elqlsssyggwGtgsLkr.DaeeieklveYlkktk.....sGeekkekvvlm 110
                 ++ +++F+ GLgd  ++ +++ e  +++++++w              ++++ s +  +    L++ D+e i ++v+ +++       +   + +k+++ 
  EPX72128.1  16 HKATVIFLHGLGDSGHGWSFMAEQFKSMGHVKWIFpnapiapvTannNFKMPSWFDIYSFNNLNKqDEEGILNCVNIIHHLIdaeiaA-GISSDKILIG 113
                 6789*****************************652222222112225678899999******7527777*******99987777744.5899****** PP

     DUF1749 111 GHstGsqd 118
                 G s G+  
  EPX72128.1 114 GFSQGCMA 121
                 *****975 PP

>> Esterase  Putative esterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.4   1.3e-05     0.032     113     152 ..     106     145 ..      18     186 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.3e-05
                 ECCCEEEEEETHHHHHHHHHHHCSTTTCCEEEEES--S-C CS
    Esterase 113 apdgravaGqSmGGlgALilalkhpdrFgsvssfSpivnp 152
                 ++d+  + G+S+G +++L ++l++p+r + ++ +S+++ +
  EPX72128.1 106 SSDKILIGGFSQGCMASLFAGLTYPKRLAGIMGHSGFLPL 145
                 44556899****************************9765 PP

>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.1    0.0078        20       3      29 ..      16      42 ..      15      50 .. 0.82
   2 ?    5.2   0.1    0.0041        11      77     150 ..     109     184 ..      92     219 .. 0.59

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.0078
  Hydrolase_4  3 pkavvvlvHGlaehsgryaelaeaLaa 29
                 +ka+v+++HGl+++    + +ae++  
   EPX72128.1 16 HKATVIFLHGLGDSGHGWSFMAEQFKS 42
                 79***********98888777777765 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0041
  Hydrolase_4  77 plfllGhSmGGliallyllrypdkvaglilsaPalkikakl.k.appllklllkllgkllpklqvsnnlkadslsr 150
                  ++ + G S G + +l ++l+yp+++ag++  + +l +++k+ + ++++++ +  +l+ +  +  +++ l ++s   
   EPX72128.1 109 KILIGGFSQGCMASLFAGLTYPKRLAGIMGHSGFLPLEHKFpEsLSSFARSIPIFLAYMNNDPIIPRALASASAEY 184
                  6777788888888888888888888888888888888777642355555544444444444444444444444444 PP

>> Esterase_phd  Esterase PHB depolymerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   8.6e-05      0.22      78     131 ..      90     142 ..      68     150 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 8.6e-05
  Esterase_phd  78 aavvvalvdalvdehrvdaarvyvaGlsaGaaladll.alhypdvfaavalhsGl 131
                    +++  l+da + + ++ + ++ + G+s G+ +a+l  +l+yp ++a +  hsG 
    EPX72128.1  90 VNIIHHLIDAEI-AAGISSDKILIGGFSQGC-MASLFaGLTYPKRLAGIMGHSGF 142
                   456667777755.4589999********986.66665279*************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       292  (0.0162865); expected 358.6 (0.02)
Passed bias filter:                      283  (0.0157845); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 1646.55
//
Query:       EPX72129.1  [L=314]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-30  107.4  30.6    1.1e-15   58.5   0.2    3.8  3  DUF5102   Domain of unknown function (DUF5102)


Domain annotation for each model (and alignments):
>> DUF5102  Domain of unknown function (DUF5102)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   5.2      0.48   8.6e+03      18      72 ..      23      81 ..      11     102 .. 0.45
   2 !   54.1  16.9   1.3e-18   2.3e-14      11     150 ..     100     207 ..      85     215 .. 0.76
   3 !   58.5   0.2   6.1e-20   1.1e-15     195     289 .]     216     311 ..     206     311 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 0.48
     DUF5102 18 ddFgDFd...dgfqeee...aees..eeaeeeepaepsasslsfplldfesldlesdllaale 72
                d+  DF+     ++ e+   +  +  e++++++ +e++++s+++p+ +++s+ ++   ++a+e
  EPX72129.1 23 DEESDFEpssTSINAENtnhT--KlkETKSSDSLQETNTASIASPVDELQSFGMD--ESKAME 81
                444566643322222222221..22123333333455555555566666655532..223333 PP

  == domain 2  score: 54.1 bits;  conditional E-value: 1.3e-18
     DUF5102  11 gaea..eddddFgDFddgfqeeeaeeseeaeeeepaepsasslsfplldfesldlesdllaaleeeldelfppseekeirslevplskesqifltersl 107
                 +  +  ++ +dF+DF++ f e e                   +++p++ fe  +     l++ e +l+++f p ++   ++l+      ++ +  er+l
  EPX72129.1 100 E--HelDESNDFDDFGE-FGEVE-------------------METPVTTFEGEH----WLENFEASLHAVFGPPKD--PEHLP------ESPLDLERIL 164
                 2..12456677777775.33333...................234566676655....6778888999***88885..44555......689******* PP

     DUF5102 108 sLwsqLvapPplqppnWirSriRRlfLvsLGvPvdLDeiLpas 150
                 sLw +L   P lq p+W rS iR  fLvs+G PvdLDe Lp++
  EPX72129.1 165 SLWDKLIEMPVLQRPDWLRSSIRHIFLVSMGLPVDLDELLPSQ 207
                 *****************************************94 PP

  == domain 3  score: 58.5 bits;  conditional E-value: 6.1e-20
     DUF5102 195 akks.rssssrrrgpppePelDlkaarrLcattdeaLkgltdeeLkehvkeLeelteeasevLeYwlkrrDekigdkEafegvIenLVkharkvrk 289
                 + k+  + s++  + + eP+++ + arrLc tt+e L   + + L +h++ L++   ea ++ +Yw+ +rD++ +dk  +e+v+++LV+h+++ rk
  EPX72129.1 216 SFKNiLKISTSSTQLENEPSFNYTVARRLCCTTHEILASRSSDALVKHINMLKQYVSEATALAQYWTDKRDSSFNDKLLYETVVDDLVQHSKRLRK 311
                 22232222234467999****************************************************************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1136  (0.063361); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 2101.66
//
Query:       EPX72130.1  [L=120]
Description: tubulin specific chaperone cofactor A [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-17   64.0   2.4    1.2e-17   64.0   2.4    1.4  1  TBCA      Tubulin binding cofactor A
     0.0053   16.6   3.6       0.11   12.3   0.0    2.1  2  SCAB_CC   Coiled-coil regions of plant-specific actin-binding
  ------ inclusion threshold ------
      0.069   13.6   3.2       0.18   12.3   3.2    1.7  1  NPV_P10   Nucleopolyhedrovirus P10 protein
       0.24   11.5   3.4        0.3   11.2   3.0    1.3  1  DUF1664   Protein of unknown function (DUF1664)
       0.28   11.2   3.9       0.38   10.8   3.8    1.3  1  DUF1043   Protein of unknown function (DUF1043)


Domain annotation for each model (and alignments):
>> TBCA  Tubulin binding cofactor A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.0   2.4   3.2e-21   1.2e-17       2      86 ..       9      94 ..       8      97 .. 0.93

  Alignments for each domain:
  == domain 1  score: 64.0 bits;  conditional E-value: 3.2e-21
        TBCA  2 kIktgvvkRlvKEeasYekEleeqearleklkadgdedeydlkkqeevleetkamipdlkkrlekavekLeelleee..eeleetee 86
                +Ikt+vvkR++K+ ++ + ++++ ++r++   +++ ede+++++q+ vl+++ + +pd+ +rl++a ++L++++++   e+l e e 
  EPX72130.1  9 NIKTNVVKRILKDVEVAHIDIQDAKERVQARIDNQ-EDEHEIEHQKFVLKQHLRALPDALRRLQQASDDLQSIVDNPvyEGLPELES 94
                6********************************98.89************************************9987766666654 PP

>> SCAB_CC  Coiled-coil regions of plant-specific actin-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.7   1.9    0.0067        24      75     119 ..      16      61 ..       7      69 .. 0.74
   2 !   12.3   0.0   3.2e-05      0.11      66     109 ..      69     112 ..      57     119 .. 0.88

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.0067
     SCAB_CC  75 kklveeersfaraeiesaraavq.rveealeeeeksskas.kkqdve 119
                 k++ ++   +a+++i++a+  vq r+++  +e+e   +++  kq + 
  EPX72130.1  16 KRILKD-VEVAHIDIQDAKERVQaRIDNQEDEHEIEHQKFvLKQHLR 61 
                 555544.4689********9998689999999998777651456655 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 3.2e-05
     SCAB_CC  66 flkqasedakklveeersfaraeiesaraavqrveealeeeeks 109
                  l+qas+d + +v++       e+esa+ +    +e+l++e+ s
  EPX72130.1  69 RLQQASDDLQSIVDNPVYEGLPELESAKPVLESAKEILQKEQSS 112
                 589**********************************9976654 PP

>> NPV_P10  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   3.2   4.9e-05      0.18      12      74 ..      28      93 ..      10      94 .. 0.66

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 4.9e-05
     NPV_P10 12 dikavddkVda.lqqqvddvqenlpdvtelnekLdaqsaqLaeletkvenIqdiLnpde...vPdlp 74
                di++ +++V+a +++q d+ + ++++   l+++L a++++L  l+++ ++ q+i  +++   +P+l+
  EPX72130.1 28 DIQDAKERVQArIDNQEDEHEIEHQK-FVLKQHLRALPDALRRLQQASDDLQSIVDNPVyegLPELE 93
                44445555543344444555555555.4599***********************9966666788875 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   3.0   8.2e-05       0.3      41     106 ..      13      80 ..       8      89 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 8.2e-05
     DUF1664  41 davesvskqleqvseslaatkrhLssridrvdk..kldeqkeiskeikeevtevredlseigedvesv 106
                 ++v+++ k++e    +++++k++ ++rid+ ++  ++++qk + k+  + + ++ + l++ ++d++s+
  EPX72130.1  13 NVVKRILKDVEVAHIDIQDAKERVQARIDNQEDehEIEHQKFVLKQHLRALPDALRRLQQASDDLQSI 80 
                 678899999999999**************987622578888888888888888888888888888887 PP

>> DUF1043  Protein of unknown function (DUF1043)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   3.8   0.00011      0.38      24      91 ..      33     100 ..      22     118 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00011
     DUF1043  24 kkqkklekelekakaeleeqkqeledHfaqsaelLetlaedyqkLyqhlaksseeLlpeleeqelfqq 91 
                 k+  + + + ++ + e+e+qk  l++H+    + L++l++  ++L++ + +   e lpele ++  ++
  EPX72130.1  33 KERVQARIDNQEDEHEIEHQKFVLKQHLRALPDALRRLQQASDDLQSIVDNPVYEGLPELESAKPVLE 100
                 4445555566778899*****************************99888877666675555544443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1515  (0.0845); expected 358.6 (0.02)
Passed bias filter:                      666  (0.0371465); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 935.56
//
Query:       EPX72131.1  [L=256]
Description: sorbose reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.1e-56  192.0   0.2    1.4e-56  191.7   0.2    1.0  1  adh_short_C2    Enoyl-(Acyl carrier protein) reductase
    1.7e-44  151.6   0.2      2e-44  151.4   0.2    1.0  1  adh_short       short chain dehydrogenase
    1.3e-10   41.4   0.2    1.8e-10   41.1   0.2    1.1  1  KR              KR domain
      0.004   17.7   0.3     0.0077   16.8   0.3    1.5  1  F420_oxidored   NADP oxidoreductase coenzyme F420-dependent
     0.0071   15.8   0.2     0.0097   15.4   0.2    1.4  1  Epimerase       NAD dependent epimerase/dehydratase family
  ------ inclusion threshold ------
      0.013   15.3   0.2      0.023   14.6   0.2    1.4  1  DFP             DNA / pantothenate metabolism flavoprotein
      0.037   13.9   0.3      0.069   13.0   0.3    1.4  1  3HCDH_N         3-hydroxyacyl-CoA dehydrogenase, NAD binding 
       0.11   12.4   0.0       0.19   11.7   0.0    1.4  1  NAD_Gly3P_dh_N  NAD-dependent glycerol-3-phosphate dehydrogen
       0.14   12.5   0.1       0.29   11.4   0.1    1.5  1  Sof1            Sof1-like domain


Domain annotation for each model (and alignments):
>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  191.7   0.2     7e-60   1.4e-56       4     233 ..      20     253 ..      17     254 .. 0.95

  Alignments for each domain:
  == domain 1  score: 191.7 bits;  conditional E-value: 7e-60
                   TSHHHHHHHHHHHTT-EEEEEESSGGH.HHHHHHHHHHTTSE..EEE--TTSHHHHHHHHHHHHHHH.SSEEEEEE-----EGCSS-GGGH-HHHHH CS
  adh_short_C2   4 sgIGraiAkalaeeGaevvltdlneea.kkrveelaeelgae..vlecDVtdeeqvealveevvekf.gklDilvnnagiapklkgpfletsreefd 96 
                    gIG+aiAkala++G +v l + ++++  + ++el e ++ +  ++ c ++++++v ++ +++ve++ g+lDi+v nagia + +  +++ +++ + 
    EPX72131.1  20 GGIGFAIAKALAAAGSNVGLLYGRNKKaIEYARELRETYNVKseAYSCSIEKRSAVIETTNRAVEELgGRLDIMVANAGIAIP-HLALEDENEDTWT 115
                   69********************999987899******99966448**********************99**************.99999******** PP

                   HHHHHHTHHHHHHHHHHHHHCTSC..CEEEEEEEGGGTSB.STTTT.HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCTGGGGSTTHHHHH CS
  adh_short_C2  97 raldvnlyslfllakaalplmkeg..gsivnlssvgaerv.vpnyn.aygaaKaalealtrylAvelgpkgiRvNavspgpikTlaasgikgfdell 189
                   ++++vnl+++++ a+aa + +k++  gs++ ++s++++++ +p++   y+a+K+a+++l+r+lAve++    RvN+vspg+i+T+++  ++  ++l+
    EPX72131.1 116 KVVNVNLNGAYYSAQAAGHFFKKQgsGSLIFTASMSGHVAnWPQQWpSYHATKGAVKHLARALAVEWAG-FARVNSVSPGYIDTDLTLYAD--ENLR 209
                   *******************99888799***********997777779**********************.9***************98776..99** PP

                   HHHHHHSTTSS-B-HHHHHHHHHHHCSGGGTT--SEEEEESTTG CS
  adh_short_C2 190 eelearaplgrlgtpeevaeaalfLasdeasyitGqtlvvDgGl 233
                   +++++ +p gr+g pee   a+++Lasd++sy+tG+++vvDgG+
    EPX72131.1 210 NQWKDLTPQGRIGLPEELVGAYVYLASDASSYCTGTDIVVDGGY 253
                   *******************************************9 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.4   0.2     1e-47     2e-44       1     189 [.      11     203 ..      11     209 .. 0.92

  Alignments for each domain:
  == domain 1  score: 151.4 bits;  conditional E-value: 1e-47
                 SEEEEESTTSHHHHHHHHHHHHTT-EEEE.EESCHHHHHHHHHHHHHT.TSEEEEEE-TTTSHHHHHHHHHHHHHHH.SSESEEEE---SS--SSGGGC CS
   adh_short   1 kvvlvtGassGIGraiakelakeGakvvv.vdrseekleevakelkee.gakalaiqvDvtdreevealvekavkkl.gkldvLvnNAGitgsgpfsel 96 
                 k+++vtG+s+GIG aiak+la++G +v + ++r+ +k+ e a el+e+ + k  a+++ +++r++v ++ ++av++l g+ld++v+NAGi+ ++ + e 
  EPX72131.1  11 KTAIVTGGSGGIGFAIAKALAAAGSNVGLlYGRN-KKAIEYARELRETyNVKSEAYSCSIEKRSAVIETTNRAVEELgGRLDIMVANAGIAIPHLALED 108
                 79***************************55555.66669*************************************99***********888888877 PP

                 SHHH.HHHHHHHHTHHHHHHHHHHHHHHHHCTTEEEEEEEEGGGTSB-..TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHHHHH CS
   adh_short  97 seee.wervievNltgvflltravlpamlkqssGrIvnvsSvagkvpv..agvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdmake 189
                 ++e+ w +v++vNl+g++  ++a+   ++kq sG+ ++++S+ g+v++   ++++Y A+K+av++l+r+la e+a    rvn+v PG++dTd++  
  EPX72131.1 109 ENEDtWTKVVNVNLNGAYYSAQAAGHFFKKQGSGSLIFTASMSGHVANwpQQWPSYHATKGAVKHLARALAVEWAGF-ARVNSVSPGYIDTDLTLY 203
                 77777***************************************877533689***********************9.9*************9855 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.1   0.2   8.9e-14   1.8e-10       3     156 ..      13     171 ..      11     182 .. 0.81

  Alignments for each domain:
  == domain 1  score: 41.1 bits;  conditional E-value: 8.9e-14
                 EEEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHT.T-EEEE----TT-HHHHHHHHHHHHHHS.S---EEEE------.---TT CS
          KR   3 ylitGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaeleal.gaevevvaaDvsdkdavealleeikaee.ppikGvihaAgvlr.dklle 98 
                  ++tGG Gg+G ++a+ la+ g +  +l +R+    +++ +  +el+++ +++ e++++ + +++av ++ +++ +e  +++   +  Ag++    +le
  EPX72131.1  13 AIVTGGSGGIGFAIAKALAAAGSNVGLLYGRN----KKAIEYARELRETyNVKSEAYSCSIEKRSAVIETTNRAVEELgGRLDIMVANAGIAIpHLALE 107
                 69******************************....445567788888669****************999988888777**********9987356799 PP

                 T--HHHHHHHHTTTTHHHHHHHHH....TTTS--SEEEEEEEHHHHH--TT-H..HHHHHHHHH CS
          KR  99 emtaedleqvlapKvkGawnLhel....ledesldffvlfSSiagllgsagqa..nYaaaNafl 156
                 + +++++++v++  ++Ga    ++    ++++    +++++S++g + +  q   +Y a+   +
  EPX72131.1 108 DENEDTWTKVVNVNLNGAYYSAQAaghfFKKQGSGSLIFTASMSGHVANWPQQwpSYHATKGAV 171
                 999**************87766651111566888999999999998877655423566665555 PP

>> F420_oxidored  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.3   3.9e-06    0.0077       3      52 ..      13      64 ..      11      85 .. 0.71

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 3.9e-06
                   EEE..TTSHHHHHHHHHHHHTTS-GGCEEEEEESSCCC...HHHHHHHHC-EEEC CS
  F420_oxidored  3 gii..GaGnmgealasgllaagaqpheivvansrnpek...aeelaeelgvkvta 52
                   +i+  G+G +g+a+a+ l+aag   +++ +   rn++    a+el+e+++vk +a
     EPX72131.1 13 AIVtgGSGGIGFAIAKALAAAG---SNVGLLYGRNKKAieyARELRETYNVKSEA 64
                   5666699***************...888888777776511145556666655444 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.2   4.9e-06    0.0097       2      61 ..      14      80 ..      13     184 .. 0.72

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 4.9e-06
                EEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC........EEEE--TT-HHHHHHHHH CS
   Epimerase  2 lVtGatGfiGsalvkallekgyevigldrlssasntarledl........elveldltdrsalerlfk 61
                +VtG++G iG a++kal+++g +v  l  +++ ++ +  ++l        e + + + +rsa+ +  +
  EPX72131.1 14 IVTGGSGGIGFAIAKALAAAGSNVGLLYGRNK-KAIEYARELretynvksEAYSCSIEKRSAVIETTN 80
                8********************77655554422.22222222234669999778888888876665443 PP

>> DFP  DNA / pantothenate metabolism flavoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.2   1.1e-05     0.023      27      68 ..      18      62 ..      13     100 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1.1e-05
                ---HHHHHHHHHHHHTT-EEEEEE-S-S..S---TT-.EEEE--S CS
         DFP 27 SSGkmGyalAeaaaarGaeVtlvsgpvs..letpegv.evvkves 68
                 SG  G+a+A+a+aa+G +V l  g  +  +e  +++ e+++v+s
  EPX72131.1 18 GSGGIGFAIAKALAAAGSNVGLLYGRNKkaIEYARELrETYNVKS 62
                69***********************96411333333324555554 PP

>> 3HCDH_N  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.3   3.5e-05     0.069       6      65 ..      18      77 ..      12     101 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 3.5e-05
                --SCCHHHHHHHHHHTT-EEEEE-S-HHHHHHHHHHHHHHHHCCTTTTSS-HHHHCCCHH CS
     3HCDH_N  6 GaGtmGagiaavfasagleVvlvdiseealekalekieksleklvekgklkeeeveaala 65
                G+G +G  ia+++a+ag +V l+  +++++ + +++++++++   e+ +++ e+++a+++
  EPX72131.1 18 GSGGIGFAIAKALAAAGSNVGLLYGRNKKAIEYARELRETYNVKSEAYSCSIEKRSAVIE 77
                89******************8877666666666666676666666666666555555544 PP

>> NAD_Gly3P_dh_N  NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   9.4e-05      0.19       6      43 ..      18      56 ..      13     107 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 9.4e-05
                    --SHHHHHHHHHHHTTT--EE.EE-S-HHHHHHHHHHSS CS
  NAD_Gly3P_dh_N  6 GaGswGtalAkvlaenghevr.lwvreeelieeineehe 43
                    G+G  G a+Ak+la +g++v  l++r+++ ie  +e +e
      EPX72131.1 18 GSGGIGFAIAKALAAAGSNVGlLYGRNKKAIEYARELRE 56
                    9******************96157777776665555544 PP

>> Sof1  Sof1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   0.00014      0.29       1      32 [.      31      62 ..      31      68 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00014
        Sof1  1 AkAseklgvlsaReraaleyreaLkekykhmp 32
                A A +++g l  R+++a+ey  +L+e y+   
  EPX72131.1 31 AAAGSNVGLLYGRNKKAIEYARELRETYNVKS 62
                678999**********************8665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       712  (0.0397122); expected 358.6 (0.02)
Passed bias filter:                      610  (0.0340231); expected 358.6 (0.02)
Passed Vit filter:                        70  (0.00390429); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 1772.90
//
Query:       EPX72132.1  [L=357]
Description: N-methyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.11   11.5   0.0       0.18   10.8   0.0    1.4  1  RrnaAD    Ribosomal RNA adenine dimethylase


Domain annotation for each model (and alignments):
>> RrnaAD  Ribosomal RNA adenine dimethylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0     1e-05      0.18      14      82 ..     169     239 ..     166     276 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 1e-05
                 --HHHHHHHHHHH-GGTTSEEEEES-TTTCCHHHHHCC-.SEEEEE-S-HHHHHHHHCHTT.TCCCEEEE- CS
      RrnaAD  14 knkkvineIldklnleekltvleigpGkGilTeeLakra.kqvvvlElderLakllqkkls.kdeklkvvh 82 
                 ++kk++++  + + +++   vl +g G Gi    L +r    +v++E  ++ +++++k+   + +++ v++
  EPX72132.1 169 WEKKIMQRSAEIIAPKPGCRVLNVGFGLGIIDSFLQERQpSMHVIIEPHPHVLAFMRKTGWmDRPNVVVYE 239
                 7899***********************************9*****************95546677777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (357 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       551  (0.0307323); expected 358.6 (0.02)
Passed bias filter:                      473  (0.0263818); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.45
# Mc/sec: 2369.13
//
Query:       EPX72133.1  [L=343]
Description: UBA domain-containing protein Dph1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.6e-21   73.5   0.3    1.3e-20   72.9   0.3    1.3  1  ubiquitin    Ubiquitin family
    6.3e-08   32.3   0.4    1.1e-07   31.6   0.4    1.3  1  Rad60-SLD    Ubiquitin-2 like Rad60 SUMO-like
    9.4e-08   31.8   0.1    2.3e-07   30.6   0.1    1.7  1  UBA          UBA/TS-N domain
    7.3e-05   23.3   0.1    0.00014   22.4   0.1    1.4  1  DUF2407      DUF2407 ubiquitin-like domain
    0.00054   19.8  13.4      0.035   14.1   1.5    3.6  3  STI1         STI1 domain
     0.0054   16.9   1.2      0.028   14.6   0.4    2.3  2  RPN13_C      UCH-binding domain
     0.0061   16.6   0.1      0.019   15.0   0.0    1.7  2  HOIP-UBA     HOIP UBA domain pair
  ------ inclusion threshold ------
      0.012   15.7   1.3       0.55   10.3   0.5    2.3  2  Ubiquitin_4  Ubiquitin-like domain
      0.046   14.2   0.3       0.13   12.8   0.3    1.7  1  Ubiquitin_2  Ubiquitin-like domain
      0.052   13.6   0.1       0.12   12.5   0.1    1.6  1  Rad60-SLD_2  Ubiquitin-2 like Rad60 SUMO-like
       0.12   12.3   0.1       0.24   11.4   0.1    1.4  1  TBK1_ULD     TANK binding kinase 1 ubiquitin-like domain


Domain annotation for each model (and alignments):
>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.9   0.3     8e-24   1.3e-20       1      70 [.       6      75 ..       6      77 .. 0.97

  Alignments for each domain:
  == domain 1  score: 72.9 bits;  conditional E-value: 8e-24
                EEEEETTSEEEEEEEETTSBHHHHHHHHHHHHTSSGGGEEEEETTEEE-TTSBHGGHTTSTTEEEEEEES CS
   ubiquitin  1 itvktldgkkitleveesdtveelKekiaekegipaeqqrLiysGkvLedertleeygiqdgstlhlvlr 70
                +t+k  +++k+t++v++++tv++lK+ ia   ++++e+qrLiy+G+vL+de+ l  y+iqdg  +hlv +
  EPX72133.1  6 LTIKAANDQKYTVTVDSESTVKNLKQIIAPVANVEVERQRLIYAGRVLKDEEYLNTYKIQDGQSVHLVRS 75
                699**9**************************************************************87 PP

>> Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.6   0.4   6.5e-11   1.1e-07       1      71 [.       4      73 ..       4      73 .. 0.98

  Alignments for each domain:
  == domain 1  score: 31.6 bits;  conditional E-value: 6.5e-11
                EEEEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEEETTEE--TTSBGGGSS--TTEEEEEE CS
   Rad60-SLD  1 ikiilkgkdgkevkikVkptttvskLieayrkkkgipeeqkvrLiFDGeeLdpnstvedldiedgdtidvv 71
                i++++k+++ +++++ V++++tv++L++  +   ++ + +++rLi+ G+ L++++ ++ ++i+dg  +++v
  EPX72133.1  4 ISLTIKAANDQKYTVTVDSESTVKNLKQIIAPVANVEV-ERQRLIYAGRVLKDEEYLNTYKIQDGQSVHLV 73
                789***********************************.***************************99986 PP

>> UBA  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.6   0.1   1.4e-10   2.3e-07       5      37 .]     306     339 ..     303     339 .. 0.94

  Alignments for each domain:
  == domain 1  score: 30.6 bits;  conditional E-value: 1.4e-10
                 HHHHHHHTTS-HH.HHHHHHHHTTTSHHHHHHHH CS
         UBA   5 aiqrLveMGFdre.evveALratgnNeErAveyL 37 
                 ++++L eMGF +  ++v+ALr++g+N++ A+e L
  EPX72133.1 306 QLSQLNEMGFVDFeQNVRALRRSGGNVQGAIESL 339
                 89*****************************966 PP

>> DUF2407  DUF2407 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.1   8.5e-08   0.00014      13      72 ..      13      78 ..       4     104 .. 0.70

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 8.5e-08
     DUF2407 13 DleLdipdpntttvagLkqliRerlpaelasrrLrLIyaGrlLedttslasslklpees........v 72
                D + +++  ++ tv++Lkq+i      +++ +r rLIyaGr+L+d++ l++   ++ +s        +
  EPX72133.1 13 DQKYTVTVDSESTVKNLKQIIAPVA--NVEVERQRLIYAGRVLKDEEYLNTYKIQDGQSvhlvrslgQ 78
                555566666789*******997655..9999999***************9876666555344444331 PP

>> STI1  STI1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.17   2.8e+02      20      43 ..      66      89 ..      64      93 .. 0.81
   2 !    9.4   2.0    0.0006      0.98      14      40 ..     144     170 ..     142     176 .. 0.88
   3 !   14.1   1.5   2.1e-05     0.035       4      32 ..     183     211 ..     180     225 .. 0.89

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.17
        STI1 20 DPefvakleeiqsNPqalqqymsD 43
                D + v  ++ + +NP+a+ ++ +D
  EPX72133.1 66 DGQSVHLVRSLGQNPTAAASNVQD 89
                566677788999*****9999998 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.0006
        STI1  14 trellsDPefvakleeiqsNPqalqqy 40 
                 ++++ls+P +++ ++e+ sNPq+l + 
  EPX72133.1 144 LANMLSNPMVQSSINEMFSNPQMLDMI 170
                 689********************9875 PP

  == domain 3  score: 14.1 bits;  conditional E-value: 2.1e-05
        STI1   4 lfaklaanPetrellsDPefvakleeiqs 32 
                  ++++++ Pe r+ + DP+ +  + ++q+
  EPX72133.1 183 YVRQMMQSPEFRRAMTDPDTMRQMAQMQQ 211
                 56799**********************97 PP

>> RPN13_C  UCH-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.73   1.2e+03      78     103 ..      64      89 ..      61      95 .. 0.78
   2 !   14.6   0.4   1.7e-05     0.028      21      95 ..     148     221 ..     132     230 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.73
     RPN13_C  78 LqsgqlgpvlsqlgLdeeavaaaakg 103
                 +q+gq   ++++lg ++ a+a++ ++
  EPX72133.1  64 IQDGQSVHLVRSLGQNPTAAASNVQD 89 
                 68999999******999966655555 PP

  == domain 2  score: 14.6 bits;  conditional E-value: 1.7e-05
     RPN13_C  21 LsdiltpealspllsdpevveeLashLPeegeateeelretlrSPqfrqalsslsqALqsgqlgpvlsqlgLdee 95 
                 Ls+ + ++ +++++s+p++++ +++  P    + +  +r++++SP+fr+a+   ++  q  q+++ l + g+d++
  EPX72133.1 148 LSNPMVQSSINEMFSNPQMLDMIINSSPH-LRNAPPYVRQMMQSPEFRRAMTDPDTMRQMAQMQQQLGAAGIDPS 221
                 55556678999******************.999999***************987766666666666666666666 PP

>> HOIP-UBA  HOIP UBA domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       1.8   2.9e+03      82     104 ..      72      94 ..      26     105 .. 0.72
   2 !   15.0   0.0   1.2e-05     0.019     103     136 ..     306     339 ..     303     342 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 1.8
    HOIP-UBA  82 lleagGdvekAvkqclreRrkKv 104
                 l+++ G    A+++ +++R ++v
  EPX72133.1  72 LVRSLGQNPTAAASNVQDRTQQV 94 
                 55666777788888888887766 PP

  == domain 2  score: 15.0 bits;  conditional E-value: 1.2e-05
    HOIP-UBA 103 KvkelaslgffdreevveaLrqsgGdvegAlveL 136
                 ++ +l ++gf+d e+ v aLr sgG+v+gA+ +L
  EPX72133.1 306 QLSQLNEMGFVDFEQNVRALRRSGGNVQGAIESL 339
                 57899*************************9987 PP

>> Ubiquitin_4  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.5   0.00034      0.55       2      37 ..       5      40 ..       4      48 .. 0.84
   2 ?    4.3   0.0     0.026        42      60      87 ..      48      74 ..      43      76 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00034
  Ubiquitin_4  2 kvtvkkldgeslevvvkqnatvkdLkkaierkvelk 37
                  +t+k  ++++  v v++ +tvk+Lk+ i    +  
   EPX72133.1  5 SLTIKAANDQKYTVTVDSESTVKNLKQIIAPVANVE 40
                 6899999*********************98766554 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.026
  Ubiquitin_4 60 fegekLkddkaklkeygirnkselsFvk 87
                 + g ++++d++ l++y i+++++++ v+
   EPX72133.1 48 YAG-RVLKDEEYLNTYKIQDGQSVHLVR 74
                 554.5678999************99887 PP

>> Ubiquitin_2  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.3   7.8e-05      0.13      14      80 ..      14      72 ..       1      75 [. 0.83

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 7.8e-05
                 SEEEEEEETTSBHHHHHHHHHHHH---TTCEEEEEE.-SSSSEEECSSGCCSBCCCCT--TTEEEEE CS
  Ubiquitin_2 14 vsserrfsksltieelKekLelitGtspasmrLqlyddkkdnevsklddddalLgsYgvkdgmrihV 80
                    +  ++++ t+++lK+ + ++  ++++ +rL +          ++ +d+  L++Y+++dg  +h 
   EPX72133.1 14 QKYTVTVDSESTVKNLKQIIAPVANVEVERQRLIYA--------GRVLKDEEYLNTYKIQDGQSVHL 72
                 456778999************************998........6777899*************996 PP

>> Rad60-SLD_2  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   7.4e-05      0.12      23      87 ..      23      74 ..       4     100 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 7.4e-05
                 T-BHHHHHHHHHHHS-TT-SSS--SCCCEEEEETTEEE-TTSBCCCCS-TTTTTTTS-EEEEEEE CS
  Rad60-SLD_2 23 aatvaelkekviaqWPkdkeekpksvndlklilaGkiLennktlkelrlplgevkggvtvmHvvv 87
                 ++tv++lk+ +          +  +v+  +li+aG++L++   l+ ++++ g+       +H+v 
   EPX72133.1 23 ESTVKNLKQIIAP-------VANVEVERQRLIYAGRVLKDEEYLNTYKIQDGQS------VHLVR 74
                 5556666554431.......223356778*******************999988......44443 PP

>> TBK1_ULD  TANK binding kinase 1 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   0.00015      0.24      14      56 ..      15      57 ..       9      66 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00015
    TBK1_ULD 14 lhkiYihpyntvaifqeevakqTkiaaekQellfeghrlllep 56
                 +++ ++++ tv+++ + +a   ++++e+Q l++ g+ l+ e+
  EPX72133.1 15 KYTVTVDSESTVKNLKQIIAPVANVEVERQRLIYAGRVLKDEE 57
                5678899******************************997666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       610  (0.0340231); expected 358.6 (0.02)
Passed bias filter:                      473  (0.0263818); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.44
# Mc/sec: 2327.51
//
Query:       EPX72134.1  [L=563]
Description: nucleoporin Nsp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.2e-34  117.7   0.1    4.5e-34  116.7   0.1    1.4  1  Nsp1_C          Nsp1-like C-terminal region
     0.0034   18.2  29.2     0.0034   18.2  29.2    6.2  6  Nucleoporin_FG  Nucleoporin FG repeat region
  ------ inclusion threshold ------
      0.061   13.8   0.5       0.87   10.1   0.0    2.1  2  DUF16           Protein of unknown function DUF16


Domain annotation for each model (and alignments):
>> Nsp1_C  Nsp1-like C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.7   0.1   7.6e-38   4.5e-34       3     108 ..     374     477 ..     372     485 .. 0.94

  Alignments for each domain:
  == domain 1  score: 116.7 bits;  conditional E-value: 7.6e-38
      Nsp1_C   3 aktveiapsaaslknktldelinkWtteLeeqekeFeeqakkvneWDrvLvengekIskLysevleaeqeqnkidqeLeyiesqqdeLeslLdnyEkel 101
                 a +ve++ps+  +k+ktl+e++nkW+ +L++q++ F++ +++v++WD++Lv+ng  IskLy e+++aeq +n++d+ Ley++s+q+eL +lLd+yE++l
  EPX72134.1 374 AGPVESPPSS--IKHKTLQEILNKWSSDLNTQTSVFNKLCDQVADWDKALVDNGALISKLYAETVDAEQLSNRVDDGLEYVSSSQQELFKLLDSYEAQL 470
                 5688888888..*************************************************************************************** PP

      Nsp1_C 102 eellskl 108
                 e++ +++
  EPX72134.1 471 ESFDGRT 477
                 *998765 PP

>> Nucleoporin_FG  Nucleoporin FG repeat region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4  30.5    0.0027        16      16      91 .]       6      81 ..       3      81 .. 0.63
   2 !   18.2  29.2   5.7e-07    0.0034       1      90 [.      37     131 ..      37     131 .. 0.81
   3 ?   -3.6  33.7         3   1.8e+04       3      84 ..      80     177 ..      79     185 .. 0.48
   4 ?   -5.1  34.1         3   1.8e+04      21      91 .]     185     272 ..     175     272 .. 0.69
   5 ?   -6.5  23.4         3   1.8e+04      17      79 ..     235     294 ..     228     303 .. 0.64
   6 ?    4.3  24.1     0.013        76       9      81 ..     283     356 ..     273     370 .. 0.59

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0027
  Nucleoporin_FG 16 GststtatstgglFG......asstatatasggglfgatsqtaasgglFGstnattqttatgglFGstaataqqttsgglFG 91
                     + +++   tg  FG      ++s+ t ++sg++lfg+  ++ +sgglFGs+++++++  +g  FGs+a++a  ++ +  FG
      EPX72134.1  6 NQGNNQ--GTGFSFGssapnnTASQGTGASSGTNLFGG--NSGNSGGLFGSASNAAKPG-GGFSFGSNASDA-GNKPSFSFG 81
                    444444..899999965544222222223333358877..8999**********99994.5555**999887.333333666 PP

  == domain 2  score: 18.2 bits;  conditional E-value: 5.7e-07
  Nucleoporin_FG   1 glFGaaatstsgglFGststt.atstgglFGasstatatasggglfgatsqtaasgglFGstnattqtta.tgglFGstaataqq.......tts 86 
                     +lFG  ++ +sgglFGs+s++ ++ +g  FG++++ + ++ +  +fg+   ++ + +lFGs n+ +++ta +++  G ++a+++q       +++
      EPX72134.1  37 NLFG-GNSGNSGGLFGSASNAaKPGGGFSFGSNASDAGNKPSF-SFGQ--PKPGGASLFGSLNKPATETAaGSSPAGDANANTNQpaqsttqPSG 127
                     59**.99**************8888888***555555555555.9999..8999*********99999888888899888888888877775555 PP

  Nucleoporin_FG  87 gglF 90 
                     g+lF
      EPX72134.1 128 GSLF 131
                     5576 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 3
  Nucleoporin_FG   3 FGaaatstsgglFGststt...atstgglFG.......asstatatasggg..lfgat.......sqtaasgglFGstnattqtta......tgg 72 
                     FG ++++ +++lFGs ++    ++++++  G       + +++t+++sgg+  +fga+       + +++++g  G         +      +gg
      EPX72134.1  80 FG-QPKPGGASLFGSLNKPateTAAGSSPAGdanantnQPAQSTTQPSGGSlfSFGAKpaapatgTPSSTGTGTGGF--------SlgsgsnSGG 165
                     78.77888888888877776666666667776644432222222333333333445555544432111111222222........1222233778 PP

  Nucleoporin_FG  73 lFGstaataqqt 84 
                     lFG++ a+++++
      EPX72134.1 166 LFGQKPANNAAA 177
                     888777777653 PP

  == domain 4  score: -5.1 bits;  conditional E-value: 3
  Nucleoporin_FG  21 t..atstgglFGasstatatasggglfgat.sqtaasgglFGstnattqtta.......tggl.FGstaataqq.......ttsgg.lFG 91 
                     +  ++++g  FG  +++t++++++g++ ++ s+t+++g  FG+++ ++++++       +gg+ FG+++ +a++       ++sgg  FG
      EPX72134.1 185 QdkPAAGGFSFG--KPQTSSTTTAGVTENKpSTTTSGGFSFGGATGAAKPAEnkpstsaSGGFsFGGATGAAKSaenkpstSASGGfSFG 272
                     1446789999**..5555555565688888899999999**9999888887788888996666699777776666776765344444565 PP

  == domain 5  score: -6.5 bits;  conditional E-value: 3
  Nucleoporin_FG  17 ststtatstgglFGasstatatasggglfgatsqtaasgglFGstnattqtta.tggl.FGstaa 79 
                     ++++t++s+g  FG  +++ a++s+     ++s++a++g  FG+++ ++++++ +  + FG+ + 
      EPX72134.1 235 NKPSTSASGGFSFG--GATGAAKSAE---NKPSTSASGGFSFGGATGAAKPAEsKPAFsFGGGSG 294
                     45555688999999..3333333333...23488999999**99999999988533334776554 PP

  == domain 6  score: 4.3 bits;  conditional E-value: 0.013
  Nucleoporin_FG   9 stsgglFGststt..atstgglFGasstatatasgg.glfgatsqtaasgglFGstnattqttatgglFGstaata 81 
                     s+ +  FG+ s +   ts+++     ++a+++++ + +   ++ +++++g  FG++ +++++++tg+lFGs+  ++
      EPX72134.1 283 SKPAFSFGGGSGSklGTSSTTPAS--NEASKPSTDTtKPSTTAPTQPSGGFSFGKQDSSSKPATTGSLFGSKPGET 356
                     333345555555545333333333..222222222212333338899999************99******987766 PP

>> DUF16  Protein of unknown function DUF16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00015      0.87      21     103 ..     385     467 ..     378     468 .. 0.92
   2 ?    1.8   0.1     0.058   3.4e+02      24      69 ..     512     556 ..     498     561 .. 0.69

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00015
                 BHHHHHHB-..BHHHHHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHH.......HHHHHHHHHHHHHHHHHHHC CS
       DUF16  21 TrkqlnefkdsnkqrLkkieakvdklgeqinkleqkvekqgekikelkveqkaqgeelnkvdetleliletLqkinkRlDsie 103
                  +k l+e  +    +L+      +kl  q++   ++    g+ i++l +e    ++  n+vd+ le +  + q++ k lDs e
  EPX72134.1 385 KHKTLQEILNKWSSDLNTQTSVFNKLCDQVADWDKALVDNGALISKLYAETVDAEQLSNRVDDGLEYVSSSQQELFKLLDSYE 467
                 689999999999999999999999***********************999888888899*********************988 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.058
                 HHHHB-..BHHHHHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHH CS
       DUF16  24 qlnefkdsnkqrLkkieakvdklgeqinkleqkvekqgekikelkv 69 
                 q+n+f +  +  + +i + ++++  ++  +e+ + + +eki+  k+
  EPX72134.1 512 QMNDFSK-PDDSISEIVKVLNAQLSSLGWVENRIFQMEEKIESVKK 556
                 5666663.45566777777777777777777777777777765554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (563 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       639  (0.0356406); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.68u 0.28s 00:00:00.96 Elapsed: 00:00:00.47
# Mc/sec: 3626.74
//
Query:       EPX72135.1  [L=73]
Description: DUF1748 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-25   87.6   0.1    4.1e-25   87.5   0.1    1.0  1  DUF1748   Fungal protein of unknown function (DUF1748)


Domain annotation for each model (and alignments):
>> DUF1748  Fungal protein of unknown function (DUF1748)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.5   0.1   2.3e-29   4.1e-25       1      69 []       4      72 ..       4      72 .. 0.98

  Alignments for each domain:
  == domain 1  score: 87.5 bits;  conditional E-value: 2.3e-29
     DUF1748  1 lgrlthyafDavLvSvvlAgvkrttgltlnsdkitdkdikkwvdkYLgvGEwvmDqsvavmgsSswFer 69
                l+rl+hy++D++L+S+++Ag++r++g++++++k++++d+k  v+kYLg+GEw +Dqs+ +++   wF++
  EPX72135.1  4 LSRLFHYGVDLALLSTCIAGIRRSSGVSFDMEKVHNEDVKLAVEKYLGFGEWAFDQSTTFLSATDWFKK 72
                68*****************************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       302  (0.0168442); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.43
# Mc/sec: 505.51
//
Query:       EPX72136.1  [L=989]
Description: 5'-3' exoribonuclease Dhp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.7e-144  482.1   0.0   1.8e-142  475.4   0.0    2.3  1  XRN_M     Xrn1 helical domain
    1.2e-97  326.1   0.8    5.5e-97  323.9   0.0    2.0  2  XRN_N     XRN 5'-3' exonuclease N-terminus


Domain annotation for each model (and alignments):
>> XRN_M  Xrn1 helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  475.4   0.0    2e-146  1.8e-142       2     443 .]     317     870 ..     316     870 .. 0.93

  Alignments for each domain:
  == domain 1  score: 475.4 bits;  conditional E-value: 2e-146
       XRN_M   2 fdleriiDDfvFlcFFvGNDFLPhlPsLeiregaidlllkvYkkelkklggyltdngevkldrveklvslvgkveekifrkrkeredrkekklakeeea 100
                 fdler+iDD+vF+ FFvGNDFLPhlPsL+ir+ga+++l ++++++l+++ggylt +g v+l r+e +++ vg  e++if++ k++edr+++++++++++
  EPX72136.1 317 FDLERAIDDWVFFIFFVGNDFLPHLPSLDIRDGAVERLTEIWRTCLPHMGGYLTLDGSVNLTRAEMILTAVGDQEDDIFKRLKQQEDRRTENQKRRAQR 415
                 8*******************************************************************************9999999888877776554 PP

       XRN_M 101 sk..edaaneeaavaeeklseskvak......................................................................... 124
                 ++  +d+   ++++++++ ++ ++++                                                                         
  EPX72136.1 416 EAnqNDSSYLDDTIIQRS-AKVETSQtttvpsvdtsgaedtrpskarktdapapenlvnlsertsnrslsatnknlinnraanrlglsneaattssink 513
                 430033333344443333.333333356899******************************************************************** PP

       XRN_M 125 ...............................saeaeaeaeaeaeaeakaekekrekaekeleeseeeeeeeDkvrLgeeGykeRYYkekfevsseeieq 192
                                                  +  a+++ +  a+  +   + + +++++ ++++ee+ +D+vrL e+Gy+eRYY++kf  s ++++q
  EPX72136.1 514 iaaanlksqmtsnetlravpieevvssptpsATDDIASSDPSGLATPIEPAPVSAGMKRKAGDTADEEASTDTVRLHESGYRERYYEQKFGFSVTDTDQ 612
                 **************************99997556667777778888888999999999999************************************** PP

       XRN_M 193 rrevvqkYveGLcWvlrYYyqGvaSWkWfyPyhyaPFaSDlknladlkikFekgspfkpleqLmavlPaaskkalPkayqkLmtdpdSpiidlypedfe 291
                   e v++Yv+GLcWvl YYyqG++SW+W+yPyhyaPFa D+knl+++ +kF+  +pf+p eqL++vlPaas + lP+  q Lmt+ dS+iid+ypedf 
  EPX72136.1 613 LGEAVRHYVHGLCWVLLYYYQGCPSWTWYYPYHYAPFAADFKNLSSIDVKFDVNQPFRPYEQLLGVLPAASRNNLPEKLQPLMTEADSEIIDFYPEDFV 711
                 *************************************************************************************************** PP

       XRN_M 292 idlnGkrvaWqgvaklPfidekrLlealakleeeLteeEkkRNtrksdvlfvsktskkaeallaklsekekdeeklkideklseglngslalaeeavve 390
                 idlnGk++ Wqgva+lPfide+rLl+a+ +++++L+e+E++RNt++s +lfvs++++ + +++++l++k+k+ + lk++ k+ +g+ g ++  ++++ +
  EPX72136.1 712 IDLNGKKFEWQGVALLPFIDENRLLSAVSRIYPSLSEDEARRNTSGSSLLFVSEHHPMYPEVVKHLYSKKKQGKPLKLSGKVGHGIFGKVSNDDSILPN 810
                 *************************************************************************************************** PP

       XRN_M 391 kklssplk........elediednkvlcvkyelPkkddyvhiaellpgvvlpekvlkeeDl 443
                   ++ p++        ++ +ie+n+ l+ ++e Pk+ + vh++ ll gv++p++vl++eD+
  EPX72136.1 811 VSVQCPVDvttaealqKYGNIENNQSLSLQFEVPKS-NFVHKSMLLRGVKMPSRVLTPEDV 870
                 ***9999888888888889*****************.88********************96 PP

>> XRN_N  XRN 5'-3' exonuclease N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  323.9   0.0  6.1e-101   5.5e-97       1     241 [.       1     255 [.       1     256 [. 0.91
   2 ?   -2.3   2.7      0.27   2.4e+03     101     127 ..     398     423 ..     395     465 .. 0.60

  Alignments for each domain:
  == domain 1  score: 323.9 bits;  conditional E-value: 6.1e-101
                 XXX-HHHHHHHHHSGGGEEE------.................SSSS-EEEEEEETHHHHHHHHS-SSS-......--SSHHHHHHHHHHHHHHHHHHH CS
       XRN_N   1 mGvpklfrwlserypkivkevieeee.................eeekefdnLYlDmNgiihkcshkedkeekelskkpkteeeifkkifkyidrlvkiv 82 
                 mGvp+lfr ls+++ k+++ v+e  +                 ++++e+dnLYlDmNgi+h+csh+ed+       +p+te+e++ +if+y dr++++v
  EPX72136.1   1 MGVPALFRLLSRKFHKVITPVVEAPTqtlpdgteigpdlslpnPNGEECDNLYLDMNGIVHPCSHPEDR------PAPETEDEMMIAIFEYTDRIMAMV 93 
                 9********************99433455556666666777667788*******************544......59********************** PP

                 -EEEEEEEE------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-BB-...-------GGGSSTTSHHHHHHHHHHHHHHHHHHHH-GGGGG CS
       XRN_N  83 rprkllylavDGvaPraKmnqqRsRRfrsakeakeekeekeelkeelekeekeee...eeeekfdsnvitpGtefmeklsealkafikkklkedpawkn 178
                 rprklly+a+DGvaPraKmnqqRsRRfrs++ea++++ e e   ee++k+   ++   ++++++dsn+itpGt+fm++l+++lk++i +kl++dp w+n
  EPX72136.1  94 RPRKLLYIAIDGVAPRAKMNQQRSRRFRSSREAAQKEAELEICIEEAKKQGIPVDeeaTKKKAWDSNCITPGTPFMDTLAKSLKYYIINKLNTDPCWRN 192
                 ************************************9877666777776654333334899************************************** PP

                 -EEEEE-TTS-S-HHHHHHHHHHHHHTSTTS-TT-EEEEE---THHHHHHHHHT-SSEEEEEE CS
       XRN_N 179 lkvilsdaevpGEGEhKimefirkqrskpeydpntrhviyglDaDLillsLathepniliLre 241
                 ++ ilsda+vpGEGEhKimefir+qr kpeydpntrhv+yglDaDLi+l+Lathep++ +Lre
  EPX72136.1 193 TRFILSDASVPGEGEHKIMEFIRSQRVKPEYDPNTRHVVYGLDADLIMLGLATHEPHFRVLRE 255
                 **************************************************************9 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.27
                 HHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       XRN_N 101 mnqqRsRRfrsakeakeekeekeelke 127
                 ++qq +RR +++k++++++ +++  ++
  EPX72136.1 398 LKQQEDRRTENQKRRAQREANQN-DSS 423
                 67899999888888877754211.111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (989 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1009  (0.0562775); expected 358.6 (0.02)
Passed bias filter:                      505  (0.0281667); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.78u 0.33s 00:00:01.11 Elapsed: 00:00:00.51
# Mc/sec: 5822.89
//
Query:       EPX72137.1  [L=322]
Description: amidohydrolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.6e-63  212.1   0.0    9.9e-63  211.9   0.0    1.0  1  CN_hydrolase  Carbon-nitrogen hydrolase


Domain annotation for each model (and alignments):
>> CN_hydrolase  Carbon-nitrogen hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  211.9   0.0   5.5e-67   9.9e-63       1     261 []      45     298 ..      45     298 .. 0.96

  Alignments for each domain:
  == domain 1  score: 211.9 bits;  conditional E-value: 5.5e-67
                   EEEEEEBB-STTHHHHHHHHHHHHHHHHHHTTESEEEEETTTTTBSSSHHHHHHHHB..HSSSHHHHHHHHHHHHHTEEEEEEEEEEECCTTEEEEE CS
  CN_hydrolase   1 rvAvvQlpqkaadleanlqklleliaeAarkgadLivlPElfitgykeeahfleaAe..aglgetlallaalarkngiavvigliereltngklqay 95 
                   r+ ++Ql++ ++++++nl+++ + i+eA+++g +++vlPE+f+ +y  ++ f e+Ae  +  ++t   l+ +a++ +++v +g i+++ ++g l  y
    EPX72137.1  45 RIGLIQLAS-TSNKDENLKNARSQISEAVQNGSKMVVLPECFNSPY-GNQYFNEYAEtiEKTSPTYNTLHSIAKELKVYVFGGSIPER-KDGEL--Y 136
                   68899****.79**********************************.888888999989999*********************77765.*****..* PP

                   EEEEEEETTSEEEEEEE-SS--E.ECTTSCECCGHHTSCS-SSS-EEEETTEEEEEEEGGGGGSHHHHHHHHHTT-SEEEE.BH.GCCCTCHHHHHH CS
  CN_hydrolase  96 ntavlldldgklvgkyrKlhLfp.geprpptaverelfepgdgipvfdtpvgkiGaaiCyeigfpellralalkgaeilvn.lserapvpksmgppq 190
                   nt +++++ g l+g++rK+hLf+ + p++ t++e+e++++g+++++++t++gkiG+ iCy+i+fpel+ + a++g  ++++ +     +   +gp +
    EPX72137.1 137 NTSMVFNPYGDLIGIHRKIHLFDvDFPGKMTFRESETLKSGNSMTIVETEFGKIGLGICYDIRFPELATVAARNGCSMMIYpG----AFNLTTGPLH 229
                   *********************************************************************************53....58889***** PP

                   HHHHHHHHHHHHTSEEEEEEBEEEHCETTEEEE--EEEE-TTS-EEEECCSSSTEEEEEEEEHHHHHHHHH CS
  CN_hydrolase 191 wellgraralengcfviaanqvggyeqlilwpvghSaiidpdGrilaglgeeeegvliaeidladvratrr 261
                   well+rara++n+++v+ ++++    +  ++ +ghS +++pdG +l+  +e+  g+++a+id ++++++r+
    EPX72137.1 230 WELLARARAVDNQIYVASCSPARD-VSATYHAWGHSTVVGPDGVVLSTMDEKP-GIVYADIDPEKMASIRK 298
                   ***********************9.9***************************.9**********999885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       578  (0.0322383); expected 358.6 (0.02)
Passed bias filter:                      543  (0.0302861); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.31s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 2083.66
//
Query:       EPX72138.1  [L=907]
Description: centaurin ADOP ribosylation factor GTPase activating protein family [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.4e-31  107.4   0.1    1.2e-30  106.0   0.1    1.7  1  ArfGap          Putative GTPase activating protein for Arf
    1.1e-11   45.1   0.3    4.2e-11   43.3   0.3    2.1  1  PH              PH domain
    5.4e-09   36.1  14.8    1.5e-08   34.6  14.8    1.8  1  BAR_3           BAR domain of APPL family
  ------ inclusion threshold ------
      0.013   15.2   0.0      0.025   14.3   0.0    1.3  1  CheB_methylest  CheB methylesterase
       0.33   11.9   3.8       0.81   10.6   0.4    3.1  3  ERp29           Endoplasmic reticulum protein ERp29, C-termin
       0.34   11.0   1.6       0.99    9.4   0.1    2.4  2  Pox_A12         Poxvirus A12 protein


Domain annotation for each model (and alignments):
>> ArfGap  Putative GTPase activating protein for Arf
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.0   0.1   3.9e-34   1.2e-30       7     114 ..     704     814 ..     698     817 .. 0.92

  Alignments for each domain:
  == domain 1  score: 106.0 bits;  conditional E-value: 3.9e-34
                 HCC.SCCCCB-TTT.-SBS--EEETTTTEEE-HHHHHHHCCS.TTT--EEETTTS---HHHHHHHHHTCHHHHHHHHTTTC-TTTSG.-TTCGHHHHHH CS
      ArfGap   7 llk.epenkvCaDC.gakeptWaslnlgvflCieCsgvHrslgvhiskvrsltldkwedeelellkalgNkkaneileaklpkeekr.skssskekree 102
                 l + +pen++CaDC ++k++tW+s+n+ v+lCieCsgvHrslg hisk+rsl  d+++++   ll ++gN+++n+++eakl++ + + s++s++++++ 
  EPX72138.1 704 LERiDPENSKCADCgSTKDVTWCSINVPVMLCIECSGVHRSLGCHISKTRSLLFDSLSQQLKLLLSRVGNSVVNRVYEAKLNSFSGKpSPDSDTDSKSL 802
                 445589********778999*************************************************************999988789999999999 PP

                 HHHHHHTCHTTC CS
      ArfGap 103 firakYeekkfa 114
                 f+++kY+e++f+
  EPX72138.1 803 FAKRKYVEHAFM 814
                 ********9997 PP

>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.3   0.3   1.4e-14   4.2e-11      12     104 ..     534     617 ..     513     618 .. 0.83

  Alignments for each domain:
  == domain 1  score: 43.3 bits;  conditional E-value: 1.4e-14
                 SSSSCSEEEEEEEEETTEEEEESSTTCTTESSEEEEEESTTEEEEEEECTTSSSSTSEEEEEESTSSSTEEEEEEESSHHHHHHHHHHHHHHH CS
          PH  12 sgkkkswkkrwfvLkdsellyykndksekdkepkgsislsncevvevvatedpkrkfcfelriverngsrtyllqasseeerkeWikaiqsai 104
                 + k+  w+k+w+v+kd+ +l y n  ++++k+   sisl+n++v++    ++ +rk+c+el+ +    + + l qa+se ++ +W+++i+++i
  EPX72138.1 534 HSKA-AWHKYWVVIKDGYVLEYANW-KDSEKTSVCSISLRNASVRK---LRKQPRKYCLELVSP----KAKRLYQATSEADLDTWVNSINESI 617
                 3334.9*******************.8999999************9...56**********888....5788*****************9876 PP

>> BAR_3  BAR domain of APPL family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.6  14.8   5.1e-12   1.5e-08       5     226 ..     224     437 ..     221     450 .. 0.79

  Alignments for each domain:
  == domain 1  score: 34.6 bits;  conditional E-value: 5.1e-12
       BAR_3   5 eclkDSPkfResleevEaeleelekklkkllKlckrlieagkaysaaqkqfaqsLrelkkes..kgdeetdesLkkf..sellqelenehtilldqaqr 99 
                 e ++D P fR+ l+e E+  + ++ + kkl+K + +  +a ++   a k ++ +L e + +    +     + L +f   ++  e++  + + +d ++ 
  EPX72138.1 224 ETYEDNPFFRSILHELEQKSSSMKLYYKKLMKRVMQASSAFEESEYALKRLSATLYEASTDTtiASQ----KMLSEFllRSFELEMIVLRHMKADFMN- 317
                 899***********************************************99999888776643222....333333112333466666655555554. PP

       BAR_3 100 sikkpLekFrkedlkevkekkkkFdkesekleaaleknaqlskkkkeseleeadnelkatrkkfhqasldyvlqinelqerk.kfeiletllsfmqaql 197
                 ++++pL++     +k v +k+ +F+ +s+++++ l++ +++ k    s+l e  +  +a++k f  +  +y++ +  lq+     ei e +l+f+    
  EPX72138.1 318 HLHEPLQRIYSTSIKLVDDKRVEFEEQSKSYYTLLSRFMSTRKD---SKLSE--SLFYAKEKRFTLQRYEYYCFMRDLQNGTtMSEINEVFLNFVTRR- 410
                 4599**********************************998887...66555..5677888889999***********98651678888888887654. PP

       BAR_3 198 tFfhqGyelfkdlepfmkeLsaqlqqlra 226
                   f++ ++ +  l+++  +L++q+++l a
  EPX72138.1 411 --FEKLSDYIDSLNDLTPQLQHQMSKLEA 437
                 ..667777777777777777777777665 PP

>> CheB_methylest  CheB methylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   8.4e-06     0.025       5      60 ..     281     337 ..     279     345 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 8.4e-06
                     E-TTHHHHHTTTGGGS.-TT-SS-EEEEE---TT-HHHHHHHHHHH-SSEEEE--TT CS
  CheB_methylest   5 aStGGlealkellaal.pedfpaavvvvqhmppsftsslaelLnresslkVkeaedg 60 
                     aSt  + a +++l+++  ++f++ ++v+ hm+++f ++l e L+r+ s ++k ++d+
      EPX72138.1 281 ASTDTTIASQKMLSEFlLRSFELEMIVLRHMKADFMNHLHEPLQRIYSTSIKLVDDK 337
                     67777888899999998777********************************99987 PP

>> ERp29  Endoplasmic reticulum protein ERp29, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.4   0.00027      0.81      31      74 ..     235     279 ..     220     299 .. 0.80
   2 ?   -0.8   0.1      0.96   2.9e+03      11      55 ..     313     356 ..     307     375 .. 0.66
   3 ?   -1.6   0.0       1.8   5.4e+03      29      55 ..     681     708 ..     663     713 .. 0.68

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00027
       ERp29  31 aaeklksekekkaaeyYvkvmekiaekgeeyvekE..lkRLekllk 74 
                 ++++l+ +k++++  yY k+m+++++ ++++ e+E  lkRL+  l 
  EPX72138.1 235 ILHELE-QKSSSMKLYYKKLMKRVMQASSAFEESEyaLKRLSATLY 279
                 556777.78888899********************44479888774 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.96
       ERp29  11 aefvaaakaereelleeakkaaeklksekekkaaeyYvkvmekia 55 
                 a f++  ++  +++++   k++++ + e e+++ +yY+ ++++++
  EPX72138.1 313 ADFMNHLHEPLQRIYSTSIKLVDDKRVEFEEQSKSYYT-LLSRFM 356
                 66777777788888888888888888666666666654.444433 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 1.8
       ERp29  29 kkaaeklk.sekekkaaeyYvkvmekia 55 
                  +  ++++  ek +++a+++++++e+i 
  EPX72138.1 681 STNTKTIEdLEKYHATANIFIQMLERID 708
                 4444444433478889999999999986 PP

>> Pox_A12  Poxvirus A12 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.1   0.00033      0.99      13      35 ..     415     437 ..     410     513 .. 0.63
   2 ?   -1.1   0.2      0.56   1.7e+03      62      87 ..     610     633 ..     599     640 .. 0.67

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00033
     Pox_A12  13 ddyietinkltpqlktilahisG 35 
                  dyi+++n ltpql+  ++++  
  EPX72138.1 415 SDYIDSLNDLTPQLQHQMSKLEA 437
                 69*************99888743 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.56
     Pox_A12  62 tkkkskklislskkkssssskstrks 87 
                 +++ ++ +islsk+ ss+ s   r s
  EPX72138.1 610 VNSINESIISLSKQSSSDDS--FRVS 633
                 56667788888666555555..4443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (907 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       832  (0.0464053); expected 358.6 (0.02)
Passed bias filter:                      426  (0.0237604); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.67u 0.27s 00:00:00.94 Elapsed: 00:00:00.43
# Mc/sec: 6279.69
//
Query:       EPX72139.1  [L=1025]
Description: rho-type GTPase activating protein Rga2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-38  131.8   0.3    5.6e-38  130.2   0.1    2.0  2  RhoGAP    RhoGAP domain
    3.1e-08   34.1   0.0    7.6e-08   32.8   0.0    1.7  1  PH        PH domain


Domain annotation for each model (and alignments):
>> RhoGAP  RhoGAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0      0.66   5.9e+03      70     122 ..     570     623 ..     567     627 .. 0.60
   2 !  130.2   0.1   6.2e-42   5.6e-38       1     147 [.     849     998 ..     849    1002 .. 0.97

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 0.66
                 TTTTGGHHHHHH.HHHTSSSHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHH CS
      RhoGAP  70 pLltkelyeeli.eaaksedeeerlealkellekLPkenrdtLryLlehLkrva 122
                 + lt e y++ +    k++++++  + ++ ll k  + +++ Lr+++  +  ++
  EPX72139.1 570 QFLTGENYQSAFvIQEKQTEQKNGTDTIHVLLAKNIEDQQSWLRAIVNQIPSIS 623
                 556666666666244455555555777777777777777777777766655555 PP

  == domain 2  score: 130.2 bits;  conditional E-value: 6.2e-42
                 BHHHHHHHHHHHH.HTTTSTTTTTS-S-HHHHHHHHHHHHHTGGGCT..TTTTSCHHHHHHHHHHHHHHSSSTTTTGGHHHHHHHHHTSSSHHHHHHHH CS
      RhoGAP   1 Piivekcvefiek.rgldtegiyRvsgskarvkelreafdkgkavds..dleeedvhavaslLKrfLrelpepLltkelyeelieaaksedeeerleal 96 
                 Pi++++c+e++e  r+ ++egiyR+sgs++++k l+e+f+kg + d+  + e +dvhava+lLK++Lrelp++Ll ++l + +  +  + + +  +++l
  EPX72139.1 849 PIVIYRCLEYLETvRAEKEEGIYRLSGSSSAIKGLKEQFNKGIDYDLvnSEEMFDVHAVAALLKLYLRELPTNLLDNSLTKIIELMPGIPHTKSSMDEL 947
                 99***********999*****************************99999999**************************9999999999********** PP

                 HHHHTTS-HHHHHHHHHHHHHHHHHHHTHHHH---HHHHHHHHHHHHHT-T CS
      RhoGAP  97 kellekLPkenrdtLryLlehLkrvaenskenkMtaknLaivfaPtLlrpk 147
                  ++l +LP en+ +L +Ll+hL+r++  +k nkM+++n++ivf+PtL  p+
  EPX72139.1 948 TRILGELPVENFVLLDSLLHHLRRIITFEKYNKMNVRNVGIVFSPTLNIPS 998
                 ***********************************************9875 PP

>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.8   0.0   8.4e-12   7.6e-08       2     104 ..     505     619 ..     504     620 .. 0.84

  Alignments for each domain:
  == domain 1  score: 32.8 bits;  conditional E-value: 8.4e-12
                 EEEEEEEEETSSSSCSEEEEEEEEETTEEEEESSTTCTTESSEEEEEESTTEEEEEEEC...........TT.SSSSTSEEEEEESTSSS......TEE CS
          PH   2 vkeGwLlkkgsgkkkswkkrwfvLkdsellyykndksekdkepkgsislsncevvevva...........te.dpkrkfcfelriverng......srt 82 
                 +keG+Ll++ ++   +   r+f+Lkd++l+y +n+    +    g+i l+++ v ++ a           +   ++++++ +++i+e++       ++ 
  EPX72139.1 505 QKEGILLRYIKNS--GLVSRYFYLKDKVLYYAENR----NAPVLGTIQLQDALVHRYSAnlpiftvidppHQfLTGENYQSAFVIQEKQTeqkngtDTI 597
                 69********988..7999******8888888888....9999**************99***99999988444777777777766665555444456** PP

                 EEEEESSHHHHHHHHHHHHHHH CS
          PH  83 yllqasseeerkeWikaiqsai 104
                 ++l a++ e+ ++W++ai + i
  EPX72139.1 598 HVLLAKNIEDQQSWLRAIVNQI 619
                 ******************8765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1025 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       883  (0.0492498); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.72u 0.27s 00:00:00.99 Elapsed: 00:00:00.41
# Mc/sec: 7490.77
//
Query:       EPX72140.1  [L=147]
Description: Sm snRNP core protein Smb1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.1e-20   70.9   0.2    6.1e-20   70.7   0.2    1.1  1  LSM       LSM domain


Domain annotation for each model (and alignments):
>> LSM  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.7   0.2   3.4e-24   6.1e-20       3      66 ..       6      79 ..       4      80 .. 0.96

  Alignments for each domain:
  == domain 1  score: 70.7 bits;  conditional E-value: 3.4e-24
                HHHTTTSEEEEEETTSEEEEEEEEEEETTSEEEEEEEEEEETTET..........EEEEEEEEEEEGGGEEEEE CS
         LSM  3 lkklinkkvtvelkngrelrGtLkgfDqfmNlvLedveetlkdkk..........ekrklglvliRGnnivlis 66
                + +l+n+ ++v +k+gr+++G+L +fD +mNlvL+d+ e+++  k          ekr lglv++RG+ iv++s
  EPX72140.1  6 MVSLLNHSLNVTTKDGRTFVGQLLAFDGHMNLVLSDCLEYRHIRKqnnpsnsvyeEKRMLGLVILRGEFIVSLS 79
                56899**************************************99**************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       252  (0.0140554); expected 358.6 (0.02)
Passed bias filter:                      219  (0.0122148); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.23s 00:00:00.56 Elapsed: 00:00:00.36
# Mc/sec: 1234.21
//
Query:       EPX72141.1  [L=174]
Description: 60S ribosomal protein L11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.9e-22   79.2   0.0    2.6e-22   78.8   0.0    1.3  1  Ribosomal_L5_C  ribosomal L5P family C-terminus
    4.7e-19   68.5   0.0    8.3e-19   67.7   0.0    1.4  1  Ribosomal_L5    Ribosomal protein L5
     0.0088   15.7   0.2       0.02   14.6   0.1    1.7  2  HTH_ABP1_N      Fission yeast centromere protein N-terminal d


Domain annotation for each model (and alignments):
>> Ribosomal_L5_C  ribosomal L5P family C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.8   0.0   4.3e-26   2.6e-22       1      83 [.      64     143 ..      64     162 .. 0.89

  Alignments for each domain:
  == domain 1  score: 78.8 bits;  conditional E-value: 4.3e-26
  Ribosomal_L5_C   1 piGvkvtLrgekmyefldkllevvlprlrdFkGiskssfdgrGnvsfGikeqiifpeieydkdkgifGmditivttak....tdeea 83 
                     +i+++vt+rg+k++e+l++ l+v++++l+      +++f+++Gn++fGi+e+i++ +i+yd+++gi+Gmd+++v+ ++    t+++a
      EPX72141.1  64 KISCHVTVRGPKAEEILERGLKVKEYELK------RRNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGMDFYVVMDRPgmrvTRRKA 143
                     69***************************......********************.*********************9766444433 PP

>> Ribosomal_L5  Ribosomal protein L5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.7   0.0   1.4e-22   8.3e-19       1      57 []       7      60 ..       7      60 .. 0.99

  Alignments for each domain:
  == domain 1  score: 67.7 bits;  conditional E-value: 1.4e-22
                  SCTTS-EEEEEEEEEE-SSSSSCHHHHHCCHHHHCCCHSS--EECC--TTCTTTCSC CS
  Ribosomal_L5  1 NvMqvPrleKivinmgvGeagedkkllekaakeLaeItGQkPvvtkakksianFkiR 57
                  N+M++ r++K+v+n+ +Ge+g++   l++aak+L++++GQ+Pv++ka+++i+ F+iR
    EPX72141.1  7 NPMKELRISKLVLNISLGESGDR---LTRAAKVLEQLSGQTPVFSKARYTIRRFGIR 60
                  9**********************...******************************9 PP

>> HTH_ABP1_N  Fission yeast centromere protein N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0      0.76   4.5e+03       9      24 ..      50      65 ..      44      68 .. 0.69
   2 !   14.6   0.1   3.3e-06      0.02       4      38 ..     135     168 ..     132     172 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.76
  HTH_ABP1_N  9 qkkaLRawafqqnprp 24
                 +  +R++ ++ n++ 
  EPX72141.1 50 ARYTIRRFGIRRNEKI 65
                5677888877777765 PP

  == domain 2  score: 14.6 bits;  conditional E-value: 3.3e-06
  HTH_ABP1_N   4 aiskeqkkaLRawafqqnprpsqkaliaWFeqeyg 38 
                  +  +++ka R+     +++ + ++ i+WF+q+y+
  EPX72141.1 135 GMRVTRRKAQRSRI-GFTHKITPEDTINWFKQKYD 168
                 577789******95.999****************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       322  (0.0179597); expected 358.6 (0.02)
Passed bias filter:                      296  (0.0165096); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1294.74
//
Query:       EPX72142.1  [L=268]
Description: rRNA methyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-14   54.9   6.6    2.1e-14   54.0   6.6    1.4  1  WBS_methylT      Methyltransferase involved in Williams-Beure
    2.1e-13   50.7   0.0    4.1e-13   49.8   0.0    1.5  1  Methyltransf_11  Methyltransferase domain
    5.9e-11   42.9   0.0    1.6e-10   41.6   0.0    1.8  1  Methyltransf_25  Methyltransferase domain
    2.4e-07   30.7   0.0    3.6e-07   30.2   0.0    1.3  1  Methyltransf_23  Methyltransferase domain
      8e-07   28.6   0.0    2.1e-06   27.2   0.0    1.6  2  CMAS             Mycolic acid cyclopropane synthetase
    1.4e-06   28.2   0.0    2.7e-06   27.3   0.0    1.4  1  Methyltransf_31  Methyltransferase domain
    5.3e-06   27.1   0.1    2.7e-05   24.8   0.0    2.3  2  Methyltransf_12  Methyltransferase domain
     0.0093   15.3   0.0      0.019   14.3   0.0    1.5  1  Ubie_methyltran  ubiE/COQ5 methyltransferase family
  ------ inclusion threshold ------
      0.011   15.1   0.1      0.031   13.7   0.0    1.9  2  PrmA             Ribosomal protein L11 methyltransferase (Prm
      0.014   15.2   0.1      0.046   13.5   0.1    1.8  2  PCMT             Protein-L-isoaspartate(D-aspartate) O-methyl
      0.032   14.4   0.0       0.05   13.8   0.0    1.3  1  TrbH             Conjugal transfer protein TrbH
       0.15   12.0   0.1       0.58   10.1   0.0    1.9  2  Methyltransf_32  Methyltransferase domain


Domain annotation for each model (and alignments):
>> WBS_methylT  Methyltransferase involved in Williams-Beuren syndrome
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.0   6.6   1.4e-17   2.1e-14      25      82 .]     208     266 ..     183     266 .. 0.88

  Alignments for each domain:
  == domain 1  score: 54.0 bits;  conditional E-value: 1.4e-17
  WBS_methylT  25 eaeqvkyekrrrkrkkrkkkkkkavksreWilkKKerrrkkGk.eVkrdSKYTGRkRka 82 
                  + +++++e+++ ++kkrk k+k++ ++re+i++KK+++rk+G+ +V++dSKY+GR+Rka
   EPX72142.1 208 NTSEMSVEDEKVNAKKRKLKRKHDMSTREYIVHKKDLNRKRGRlSVPKDSKYSGRRRKA 266
                  5789999999*9***99999999999*******************************95 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.8   0.0   2.8e-16   4.1e-13       1      95 [.      52     155 ..      52     156 .. 0.88

  Alignments for each domain:
  == domain 1  score: 49.8 bits;  conditional E-value: 2.8e-16
                      EEET-TTSHHHHHHHHTTSEEEEEES-HHHHHHHHHHCCHHT-EEEETTEECCC.TSS-TT-EEEEEEES-CCC-...C........CHHHHHH CS
  Methyltransf_11   1 LdvGcGtGrlaealakrgarvvgvDlskemlklakekaseeglkvefvvadaek.lpfednsfDlvvssevlhhv...e........dpekalk 82 
                      Ld+GcG+G+ +   +++g+ +vg+D+s+ ml +a e ++ eg   +++ ad+ + +pf+ ++fD v+s ++++++   +        +++++++
       EPX72142.1  52 LDIGCGSGISTSIAESYGHVTVGMDISPSMLSVALESQEVEG---DMLLADMGNgVPFRAGTFDGVISISAIQWLlnaDktcnipqrRLNRFFE 142
                      8******************************99977777776...78******978*******************8651667777779999999 PP

                      HHHHHEEEEEEEE CS
  Methyltransf_11  83 eiaRvLkpgGllv 95 
                       ++  ++ gG+ v
       EPX72142.1 143 TLYSSMRRGGRAV 155
                      9999999999876 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.6   0.0   1.1e-13   1.6e-10       2      97 .]      52     152 ..      51     152 .. 0.79

  Alignments for each domain:
  == domain 1  score: 41.6 bits;  conditional E-value: 1.1e-13
                      EEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTTTEEEEESBC.CGBSSSTTTEEEEEEESTGG.........GSSHHHHHHH CS
  Methyltransf_25   2 LdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeeglnvefvqgda.edlpfedgsfDlvvssgalh.........hlsdedleka 85 
                      Ld+GcG+G  t  +   +g +  +g+Dis++ml  a e     +++ +++ +d+ + +pf +g+fD v+s+ a++          +++++l ++
       EPX72142.1  52 LDIGCGSGISTSIAE-SYG-HVTVGMDISPSMLSVALESQ---EVEGDMLLADMgNGVPFRAGTFDGVISISAIQwllnadktcNIPQRRLNRF 140
                      9*******7776655.556.8999************9999...4788*******555*************877885555555544666666778 PP

                      HHHHHHHEEEEE CS
  Methyltransf_25  86 lkeiarvLkpgG 97 
                      ++ +++ ++ gG
       EPX72142.1 141 FETLYSSMRRGG 152
                      888888888777 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   0.0   2.4e-10   3.6e-07      20     132 ..      45     171 ..      24     209 .. 0.77

  Alignments for each domain:
  == domain 1  score: 30.2 bits;  conditional E-value: 2.4e-10
  Methyltransf_23  20 lraggrvLdiGcGtGillevlrengfsvtgvDlspeaveiaekakkaqkdqfdeqeaae.......pqgkfdlIvlrevlehvpdpp....... 99 
                       + ++ +LdiGcG+Gi +++++ +g+  +g+D+sp + + a     +q +    +  a+        +g+fd ++++  + ++ +         
       EPX72142.1  45 PEGPSLLLDIGCGSGISTSIAESYGHVTVGMDISPSMLSVAL---ESQEVEG-DMLLADmgngvpfRAGTFDGVISISAIQWLLNADktcnipq 134
                      4556679****************************9999762...2222222.2222223444444788***************8667799999 PP

  Methyltransf_23 100 ....ellrqiatllkpgGylllseplaslkedrllld 132
                          + + ++++ ++ gG+++ +++ +s+ + +++ld
       EPX72142.1 135 rrlnRFFETLYSSMRRGGRAVMQYYPESDRSQQMILD 171
                      9999********************9888877777665 PP

>> CMAS  Mycolic acid cyclopropane synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.2   0.0   1.4e-09   2.1e-06      40     175 ..      25     167 ..      19     194 .. 0.84
   2 ?   -1.9   0.0       1.1   1.6e+03     150     180 ..     193     223 ..     189     240 .. 0.70

  Alignments for each domain:
  == domain 1  score: 27.2 bits;  conditional E-value: 1.4e-09
                 T--HHHHHHHHHHHHHTTTT--TT-EEEEES-TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHTS-SSS-EEEEES-GGG---.--SEEEEES-G CS
        CMAS  40 dmtLeeAqlaKldlileklelkpGmtlLdiGcGWGslvrraverydvkvvglTlSkeqaklakkrvdeldlerkvevklldyedlde.kvdrvvsvgaf 137
                 ++ +++ q + +++++e l+ +  + lLdiGcG G + +  +e y+   vg+ +S     +a ++ + ++  +    ++ +   ++   +d v+s+ a+
  EPX72142.1  25 NTRIQSIQAEMTERAIELLDPEGPSLLLDIGCGSG-ISTSIAESYGHVTVGMDISPSMLSVALESQEVEG--DMLLADMGNGVPFRAgTFDGVISISAI 120
                 5668899999999999999999999********98.5678899*************99998887766666..5556666667778777*********** PP

                 GGT.........SGGGHHHHHHHHHHHS-TT-EEEEEEEEE--HHHH CS
        CMAS 138 ehv.........gkenydtffkklkkllkedGllllhtitslhkkel 175
                 + +          ++++++ff++l++ ++++G+ +++     +++++
  EPX72142.1 121 QWLlnadktcniPQRRLNRFFETLYSSMRRGGRAVMQYYPESDRSQQ 167
                 *9999999998899*******************99987776666655 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.1
                 HHHHHHS-TT-EEEEEEEEE--HHHHHCTTC CS
        CMAS 150 kklkkllkedGllllhtitslhkkelaergl 180
                 kk++ +l+++G+ +l+t  +  ++e++++++
  EPX72142.1 193 KKFYLILQAGGMRTLNTSEMSVEDEKVNAKK 223
                 5678888999998888887776666554443 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.3   0.0   1.8e-09   2.7e-06       7     149 ..      51     200 ..      46     203 .. 0.73

  Alignments for each domain:
  == domain 1  score: 27.3 bits;  conditional E-value: 1.8e-09
  Methyltransf_31   7 vlDlGCGtGeltfelaeelgpkae.vvGiDiseeaielArenaqklgldnveFeqgdiee.leklledekfDlilsnevl...........nal 87 
                      +lD+GCG+G ++  +a e +  ++  vG Dis+ ++++A e    ++++   +  +d+ +  +  +   +fD ++s +++             +
       EPX72142.1  51 LLDIGCGSG-ISTSIA-ESY--GHvTVGMDISPSMLSVALES---QEVE-GDMLLADMGNgVP--FRAGTFDGVISISAIqwllnadktcnIPQ 134
                      69******6.666666.333..33369**************4...4454.569**********..999*********99988777777766667 PP

  Methyltransf_31  88 adpdkileeiervlkpggilliedprllaelpakveeeskayevvegak....igtqkdelyelle 149
                        ++ ++e + + ++ gg+ +++++   ++  +++ ++ k+ + + g+      ++ ++++y +l+
       EPX72142.1 135 RRLNRFFETLYSSMRRGGRAVMQYYPESDRSQQMILDTAKKCGFAGGIVvdhpESKRQKKFYLILQ 200
                      77777777****************995555558888888844222222243323335555555555 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.0   1.8e-08   2.7e-05       1      98 [.      52     153 ..      52     154 .. 0.71
   2 ?   -2.7   0.0       6.8     1e+04      26      40 ..     162     176 ..     157     187 .. 0.78

  Alignments for each domain:
  == domain 1  score: 24.8 bits;  conditional E-value: 1.8e-08
  Methyltransf_12   1 LeiGcGtGsllralleklpdieyt.gvDispsaiedakeklakrennnnnnvelealdlldldggssfDlvvasnvlhhl...........kdi 82 
                      L+iGcG+G  ++  + +    ++t g+Disps++  a e    ++  +    +  +   + +   ++fD v++++++++l           + +
       EPX72142.1  52 LDIGCGSGISTSIAESY---GHVTvGMDISPSMLSVALESQEVEG--DMLLADMGNGVPF-R--AGTFDGVISISAIQWLlnadktcnipqRRL 137
                      8*****99666555555...55555*********44444433333..3333333333322.2..26**************99999999988888 PP

  Methyltransf_12  83 revldnirklLkpgGr 98 
                      +++++ +++ ++ gGr
       EPX72142.1 138 NRFFETLYSSMRRGGR 153
                      8999999999999986 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 6.8
  Methyltransf_12  26 vDispsaiedakekl 40 
                      +D s+++i d+++k 
       EPX72142.1 162 SDRSQQMILDTAKKC 176
                      689999998877775 PP

>> Ubie_methyltran  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   1.3e-05     0.019      45     120 ..      45     114 ..      19     137 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.3e-05
                      S--TTEEEEES-TT-HHHHHHHHHHHHHHEEEEEES-HHHHHHHHHHHHHHTSSTEEEEE--TTT-TTS-T-EEEE CS
  Ubie_methyltran  45 vkrgakvlDvagGtgDlafklsdsvgekgkvvvlDinenmLkvgekklkeegkinieflqanaeeLpfeddsfDvv 120
                      +  ++ +lD+ +G+g ++ ++++s g+    v++Di+++mL+v+ +  + eg +   +l   ++ +pf  ++fD v
       EPX72142.1  45 PEGPSLLLDIGCGSG-ISTSIAESYGHV--TVGMDISPSMLSVALESQEVEGDM---LLADMGNGVPFRAGTFDGV 114
                      5556789******99.566676666543..4789**********9999999987...6777788999999999954 PP

>> PrmA  Ribosomal protein L11 methyltransferase (PrmA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0     2e-05     0.031     163     205 ..      49      90 ..      33     157 .. 0.76
   2 ?   -2.8   0.0       2.2   3.3e+03     190     213 ..     207     230 ..     187     244 .. 0.54

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 2e-05
        PrmA 163 eevlDvGtGSGiLaiaaakLgakkvvavDiDevAvkvakeNae 205
                 + +lD+G+GSGi +  a   g+   v++Di +  ++va e  e
  EPX72142.1  49 SLLLDIGCGSGISTSIAESYGHV-TVGMDISPSMLSVALESQE 90 
                 4578********76666677765.57******99999987655 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 2.2
        PrmA 190 vDiDevAvkvakeNaelNkveakl 213
                 + + e++v+  k Na++ k+++k 
  EPX72142.1 207 LNTSEMSVEDEKVNAKKRKLKRKH 230
                 334444444444444444444433 PP

>> PCMT  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.1   3.1e-05     0.046      58     111 ..      32      82 ..      13     104 .. 0.77
   2 ?   -0.5   0.0      0.57   8.5e+02      58      95 ..      78     115 ..      66     122 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 3.1e-05
                 -HHHHHHHHHHTT--TT-EEEEES-TTSHHHHHHHHHHCTTCEEEEEESBHHHH CS
        PCMT  58 aphmvalalellelkkgarvLevGsGsGyltavlarlvgekgrvvsierikelv 111
                 +  m  +a+ell+ +  +  L++G+GsG+ t +     g+++  v+++ ++++ 
  EPX72142.1  32 QAEMTERAIELLDPEGPSLLLDIGCGSGISTSIAES-YGHVT--VGMDISPSML 82 
                 5678889999999999999************98654.45555..6666666655 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.57
                 -HHHHHHHHHHTT--TT-EEEEES-TTSHHHHHHHHHH CS
        PCMT  58 aphmvalalellelkkgarvLevGsGsGyltavlarlv 95 
                 +p+m ++ale  e++  +   ++G G  +++  +  ++
  EPX72142.1  78 SPSMLSVALESQEVEGDMLLADMGNGVPFRAGTFDGVI 115
                 499999****999*9999999****9999888776655 PP

>> TrbH  Conjugal transfer protein TrbH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   3.4e-05      0.05      21      90 ..     126     199 ..     118     222 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 3.4e-05
        TrbH  21 aktrlelqqkvpdefGaaLvkelrekGyavlefaperakaa.aeataaeatglpLryvldeakssn...lyrlt 90 
                 a  + ++ q+  + f ++L +++r  G av+++ pe+ +++     +a++ g+    v+d+ +s+    +y + 
  EPX72142.1 126 ADKTCNIPQRRLNRFFETLYSSMRRGGRAVMQYYPESDRSQqMILDTAKKCGFAGGIVVDHPESKRqkkFYLIL 199
                 56677889999999*********************998887455677888899999999998765423366554 PP

>> Methyltransf_32  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00039      0.58      12      71 ..      35      89 ..      26     104 .. 0.80
   2 ?   -1.0   0.1         1   1.5e+03      65      85 ..     217     235 ..     182     259 .. 0.58

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00039
  Methyltransf_32 12 lvakllkelakesgaltvvDvGaGkgYLsfvlalkekeyklkvvgidakeelvekaekra 71
                     + +++++   + +g+  ++D+G+G g  +++ ++    y++  vg+d++ ++ + a + +
       EPX72142.1 35 MTERAIEL-LDPEGPSLLLDIGCGSGISTSIAES----YGHVTVGMDISPSMLSVALESQ 89
                     44555555.68889999*********88888887....9**********99988887765 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 1
  Methyltransf_32  65 ekaekraeklgkkfnkrlsfa 85 
                      ek ++ ++kl+   ++++s+ 
       EPX72142.1 217 EKVNAKKRKLK--RKHDMSTR 235
                      22222223333..22233333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (268 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       937  (0.0522617); expected 358.6 (0.02)
Passed bias filter:                      637  (0.035529); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 1944.31
//
Query:       EPX72143.1  [L=1656]
Description: clathrin heavy chain Chc1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   2.6e-198  649.8  46.6    8.2e-31  106.8   0.9    8.0  8  Clathrin         Region in Clathrin and VPS
    1.8e-31  106.9   4.2    9.6e-07   28.8   0.0    6.1  6  Clathrin_propel  Clathrin propeller repeat
    6.3e-31  106.1   0.8    6.3e-31  106.1   0.8    2.9  4  Clathrin_H_link  Clathrin-H-link
    5.7e-09   35.2   0.2    1.6e-08   33.7   0.2    1.9  1  Clathrin-link    Clathrin, heavy-chain linker
    6.7e-08   32.0   4.5      0.037   13.1   0.0    4.3  4  Coatomer_WDAD    Coatomer WD associated region
    0.00026   20.8   5.2        3.2    8.0   0.0    6.9  7  TPR_7            Tetratricopeptide repeat
  ------ inclusion threshold ------
       0.32   11.3  14.7       0.16   12.3   0.2    6.2  7  Vps39_1          Vacuolar sorting protein 39 domain 1
       0.35   11.1   7.2         63    4.1   0.0    6.9  7  TPR_2            Tetratricopeptide repeat
        1.6    9.8  14.1    1.2e+02    3.9   0.2    8.7 10  TPR_14           Tetratricopeptide repeat
        3.4    8.3   4.9       0.58   10.7   0.3    2.1  3  TPPII_N          Tripeptidyl peptidase II N terminal


Domain annotation for each model (and alignments):
>> Clathrin  Region in Clathrin and VPS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.42   7.5e+02       9      41 ..     494     526 ..     486     535 .. 0.80
   2 !   88.1   0.2   2.6e-28   4.7e-25       4     142 ..     536     674 ..     533     675 .. 0.93
   3 !   77.4   1.0   5.4e-25   9.8e-22       4     142 ..     685     822 ..     682     823 .. 0.94
   4 !  106.8   0.9   4.5e-34   8.2e-31       1     137 [.     829     961 ..     829     967 .. 0.95
   5 !  103.1   0.9   6.2e-33   1.1e-29       2     138 ..     975    1113 ..     974    1117 .. 0.97
   6 !  102.7   0.0   8.7e-33   1.6e-29       3     142 ..    1125    1262 ..    1123    1263 .. 0.97
   7 !  106.1   2.3   7.3e-34   1.3e-30       1     141 [.    1269    1411 ..    1269    1413 .. 0.97
   8 !   91.6   3.7   2.3e-29   4.1e-26       3     143 .]    1419    1559 ..    1417    1559 .. 0.97

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.42
                 -CCCCHHHHHCTT-HHHHCHHHCCHHHCHTS-- CS
    Clathrin   9 dlsrvvklfeeaglleelleyLekvlkedsken 41 
                 d++r+v++ +++++++   ++L++++  ++ + 
  EPX72143.1 494 DFNRLVTYTSQTSFTPDYVSLLQNLVRVNPDQA 526
                 7899********************997775444 PP

  == domain 2  score: 88.1 bits;  conditional E-value: 2.6e-28
                 CCTTS-CCCCHHHHHCTT-HHHHCHHHCCHHHCHTS--HHHHHHHHHHHHHTT-HHHHHHTTS..S---S-TTHHHHHHHT-SSHHHHHHHHHTTXTHS CS
    Clathrin   4 ltdpidlsrvvklfeeaglleelleyLekvlkedskenpalqtallelyakyddpqeleeflk..knnnydlekvaklcekadlyeeavilykkinefk 100
                 + ++++l+++v++f++++l ++++ +L ++lk ds+++++lqt+lle+++ + + q+++++l   +++++d + +a+lce a+l+++a++ly k  ++k
  EPX72143.1 536 SDPSVNLEKIVDIFMSQNLVQQATAFLLDALKDDSPAHSHLQTRLLEMNLINAP-QVADAILGnqMFSHFDHQAIASLCERAGLVQRALELYEKPADIK 633
                 67899************************************************6.********99********************************** PP

                 SHSSXSSSSHCSCHHH..HTTTTTXXSHHHHHHHHHHHSSXSHH CS
    Clathrin 101 kaisllkklkdfddai..eyaakvsnpelwekllealldkkpfe 142
                 ++i+  ++ ++++ ++   y++k s  e+++ l e+l  + +++
  EPX72143.1 634 RVIV--HT-NLLNPEWlmSYFGKFSPDEVYDYLREMLRTNLRQN 674
                 *554..44.677777778*******************9999887 PP

  == domain 3  score: 77.4 bits;  conditional E-value: 5.4e-25
                 CCTTS-CCCCHHHHHCTT-HHHHCHHHCCHHHCHTS--HHHHHHHHHHHHHTT-HHHHHHTTSS---S-TTHHHHHHHT-SSHHHHHHHHHT..TXTHS CS
    Clathrin   4 ltdpidlsrvvklfeeaglleelleyLekvlkedskenpalqtallelyakyddpqeleeflkknnnydlekvaklcekadlyeeavilykk..inefk 100
                 ++d +  +r++++fe+++ +e l++yL ++++ +  ++ ++  +++++++ +++++e+e++++ nn y++ekv +l+++a+l +++++++ +  +n+++
  EPX72143.1 685 YSDLVGPQRLIEMFEKFKTFEGLYYYLGSIVNIT--QDADVVYKYIQAACLMNQFTEVERICRDNNVYNPEKVKNLLKEAKLADQLPLILVCdrYNFVN 781
                 6788899************************755..88**************************************************999999***** PP

                 SHSSXSSSSHCSCHHHHTTTTTXXSHHHHHHHHHHHSSXSHH CS
    Clathrin 101 kaisllkklkdfddaieyaakvsnpelwekllealldkkpfe 142
                 ++i  + + +++++ i++++++ np   + +++alld +++e
  EPX72143.1 782 DLIF-YLHRNNLPQFIQIYVQRINPSKTPHVIGALLDMDCEE 822
                 *998.66669***************************99986 PP

  == domain 4  score: 106.8 bits;  conditional E-value: 4.5e-34
                 CCCCCTTS-CCCCHHHHHCTT-HHHHCHHHCCHHHCHTS--HHHHHHHHHHHHHTT-HHHHHHTTSS---S-TTHHHHHHHT-SSHHHHHHHHHTTXTH CS
    Clathrin   1 lieltdpidlsrvvklfeeaglleelleyLekvlkedskenpalqtallelyakyddpqeleeflkknnnydlekvaklcekadlyeeavilykkinef 99 
                 l+++  +++++++v+++e++++l++ll+yLe +l+ +s++ +a+++al+++y+++++  ++e flk+nn yd+ +++k+cek+d+y +a+i y k  ++
  EPX72143.1 829 LNSVVGQVPVDELVEEVERRNRLKLLLPYLETLLQSGSQD-RAIYDALAKIYIDSNN--NPEVFLKENNVYDTLSIGKYCEKRDPY-LAFIAYEKGTND 923
                 67788899**************************999998.***************7..***************************.************ PP

                 SSHSSXSSSSHCSCHHHHTTTTTXXSHHHHHHHHHHHS CS
    Clathrin 100 kkaisllkklkdfddaieyaakvsnpelwekllealld 137
                 +++i l++++++f++ ++y+ k+s+pelw ++l+ +l 
  EPX72143.1 924 AELIALCNENSMFKQLARYLLKRSDPELWVDVLQDQLY 961
                 ********************************998775 PP

  == domain 5  score: 103.1 bits;  conditional E-value: 6.2e-33
                  CCCCTTS-CCCCHHHHHCTT-HHHHCHHHCCHHHCHTS..--HHHHHHHHHHHHHTT-HHHHHHTTSS---S-TTHHHHHHHT-SSHHHHHHHHHTT CS
    Clathrin    2 ieltdpidlsrvvklfeeaglleelleyLekvlkedsk..enpalqtallelyakyddpqeleeflkknnnydlekvaklcekadlyeeavilykki 96  
                  +e++dp+ +s vv+ ++e +l+ +l+e+Lek++++ s   en +lq++l  +++k d+ ++++e++++++nyd+e++ +++ +++l+eea+ +yk +
  EPX72143.1  975 PESSDPEAVSIVVRSLMEVDLPSQLIELLEKIVLQPSSfsENANLQNLLFLTAIKADK-SRVMEYIERLHNYDVEEISEIAVENGLFEEAFKIYKSH 1070
                  6899*****************************988778******************9.************************************** PP

                  XTHSSHSSX.SSSSHCSCHHHHTTTTTXXSHHHHHHHHHHHSS CS
    Clathrin   97 nefkkaisl.lkklkdfddaieyaakvsnpelwekllealldk 138 
                  +++++a+++ +++  ++d+a eya+ v++pe+w++l++a+ld 
  EPX72143.1 1071 QKHEEAMKVlVEDIVSLDRAEEYAEIVDQPEVWSRLAKAQLDG 1113
                  ********88******************************996 PP

  == domain 6  score: 102.7 bits;  conditional E-value: 8.7e-33
                  CCCTTS-CCCCHHHHHCTT-HHHHCHHHCCHHHCHTS--HHHHHHHHHHHHHTT-HHHHHHTTSS---S-TTHHHHHHHT-SSHHHHHHHHHTTXTH CS
    Clathrin    3 eltdpidlsrvvklfeeaglleelleyLekvlkedskenpalqtallelyakyddpqeleeflkknnnydlekvaklcekadlyeeavilykkinef 99  
                  +++dp+++++v++l ++ag++e l++yL ++++  ++ +p+++ a+l  ya+++++ e+e+fl  +n  d++ v++ c + ++ye a+i+y+ i+++
  EPX72143.1 1125 KANDPSNYEEVIELSSRAGKYEDLIKYLFMARS--KMHEPDVDSAILVSYARTNQLAEMETFLIGSNVADVKAVGDECFDSGKYEAARIMYSSISNW 1219
                  6799****************************4..7788********************************************************** PP

                  SSHSSXSSSSHCSCHHHHTTTTTXXSHHHHHHHHHHHSSXSHH CS
    Clathrin  100 kkaisllkklkdfddaieyaakvsnpelwekllealldkkpfe 142 
                  + ++++l +l++++ a++ a+k+++ ++w+++  a++++++f+
  EPX72143.1 1220 SMLATTLVYLSEYQGAVDCARKANSIKVWKQVGTACIEQREFR 1262
                  ***************************************9986 PP

  == domain 7  score: 106.1 bits;  conditional E-value: 7.3e-34
                  CCCCCTTS-CCCCHHHHHCTT-HHHHCHHHCCHHHCHTS--HHHHHHHHHHHHHTT-HHHHHHTTSS---.S-TTHHHHHHHT-SSHHHHHHHHHTT CS
    Clathrin    1 lieltdpidlsrvvklfeeaglleelleyLekvlkedskenpalqtallelyakyddpqeleeflkknnn.ydlekvaklcekadlyeeavilykki 96  
                  l+++ ++++l+ +++l+e++g+++e+++++e++l + +++++a++t+l++ly ky++ ++l+e+lk ++   + +kv k c +a+l++eav+ly + 
  EPX72143.1 1269 LNLIVHAEELTFLIRLYEDRGYFDEVISLMEAGL-GLERAHMAFYTELAILYSKYKP-ERLMEHLKLFWGrLNMAKVVKACDQAHLWNEAVFLYVHD 1363
                  68899*****************************.999******************6.********99999************************** PP

                  XTHSSHSSX.SSSSHCSCHHH..HTTTTTXXSHHHHHHHHHHHSSXSH CS
    Clathrin   97 nefkkaisl.lkklkdfddai..eyaakvsnpelwekllealldkkpf 141 
                  + +++a+ + ++++++fd++   +++++v n el++++l+++l+++p 
  EPX72143.1 1364 QSYDNAAAImMEEPEAFDHQSfkDIIVHVANLELYYRALHFYLEQHPM 1411
                  ********77***********************************986 PP

  == domain 8  score: 91.6 bits;  conditional E-value: 2.3e-29
                  CCCTTS-CCCCHHHHHCTT-HHHHCHHHCCHHHCHTS--HHHHHHHHHHHHHTT-HHHHHHTTSS---S-TTHHHHHHHT-SSHHHHHH...HHHTT CS
    Clathrin    3 eltdpidlsrvvklfeeaglleelleyLekvlkedskenpalqtallelyakyddpqeleeflkknnnydlekvaklcekadlyeeavi...lykki 96  
                   lt +id+ rv+++fe+ ++++++  ++ +++   + +  a+++a+++l+++++d+q l++++++++ +d++ +a+++ek+ l e+++i   +y+k+
  EPX72143.1 1419 ALTSRIDHARVIRIFEKSENTPLIMNFMVAIQ---HLNIEAVNNAYNDLLIEMEDYQSLQDSIDNYDRFDAIALARRLEKHTLLEFRRIaayIYRKN 1512
                  57899***************************...7799*************************************************9999***** PP

                  XTHSSHSSXSSSSHCSCHHHHTTTTTXXSHHHHHHHHHHHSSXSHHH CS
    Clathrin   97 nefkkaisllkklkdfddaieyaakvsnpelwekllealldkkpfel 143 
                  +++ ++i+l+k++  ++dai +a+ ++++e++e+l+++++++++ e+
  EPX72143.1 1513 GRWIQSIELSKQDRFYKDAIITARDSKQTEIAEDLMKYFVEIGNYEC 1559
                  *****************************************998775 PP

>> Clathrin_propel  Clathrin propeller repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.1   2.2e-06    0.0039       6      37 .]      23      55 ..      21      55 .. 0.93
   2 !   18.0   0.0   1.4e-06    0.0026       4      37 .]      62      93 ..      59      93 .. 0.94
   3 !   28.8   0.0   5.4e-10   9.6e-07       2      36 ..     147     184 ..     146     185 .. 0.96
   4 ?   -2.9   0.0       5.8     1e+04      21      37 .]     216     232 ..     208     232 .. 0.80
   5 !   12.5   0.0   8.1e-05      0.15       6      37 .]     254     285 ..     250     285 .. 0.95
   6 !   26.4   0.1   3.2e-09   5.7e-06       2      37 .]     294     327 ..     293     327 .. 0.93

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 2.2e-06
                     EEECCCEEEEECCEEEEEE.CETEEEEEEEETT CS
  Clathrin_propel  6 iinfptatneswlfiiain.gtkkGqvqlysve 37
                      ++f+++t +s+++++++     ++qv+++++e
       EPX72143.1 23 SFGFTNVTLQSEKYVCIRDnSNGTNQVVIVDLE 55
                     799*****************8899*******98 PP

  == domain 2  score: 18.0 bits;  conditional E-value: 1.4e-06
                     CEEEECCCEEEEECCEEEEEECETEEEEEEEETT CS
  Clathrin_propel  4 sqiinfptatneswlfiiaingtkkGqvqlysve 37
                     +++i ++++++++ ++iia++   + q+q++++e
       EPX72143.1 62 RRPISADSVIMHPKKMIIALK--AQKQLQVFDLE 93
                     5789*****************..999******98 PP

  == domain 3  score: 28.8 bits;  conditional E-value: 5.4e-10
                      TTCEEEECCCEEEEECCEEEEEE...CETEEEEEEEET CS
  Clathrin_propel   2 ansqiinfptatneswlfiiain...gtkkGqvqlysv 36 
                      +++qii ++++ ne w  +++i+   ++++G++qlys 
       EPX72143.1 147 NGTQIISYRSNYNEEWFTLVGISsrdNRIAGNLQLYSK 184
                      899*********************************96 PP

  == domain 4  score: -2.9 bits;  conditional E-value: 5.8
                      EEEECETEEEEEEEETT CS
  Clathrin_propel  21 iaingtkkGqvqlysve 37 
                      +a++  +++++ +++++
       EPX72143.1 216 LASRLPTGSKLSIVEID 232
                      45557799*******97 PP

  == domain 5  score: 12.5 bits;  conditional E-value: 8.1e-05
                      EEECCCEEEEECCEEEEEECETEEEEEEEETT CS
  Clathrin_propel   6 iinfptatneswlfiiaingtkkGqvqlysve 37 
                      +++fp a++   ++ +a+  tk G++++y++e
       EPX72143.1 254 ANDFPIAIQIAPKYGVAYVSTKFGFIHVYDLE 285
                      89****************************98 PP

  == domain 6  score: 26.4 bits;  conditional E-value: 3.2e-09
                      TTCEEEECCCEEEEECCEEEEEECETEEEEEEEETT CS
  Clathrin_propel   2 ansqiinfptatneswlfiiaingtkkGqvqlysve 37 
                      + s +++f+ta++es ++i+a+n  +kGqv+++s++
       EPX72143.1 294 RVSGESIFVTAPHESVNGIMAVN--RKGQVLSVSIN 327
                      668899*****************..*********97 PP

>> Clathrin_H_link  Clathrin-H-link
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.1   0.8   3.5e-34   6.3e-31       1      66 []     353     418 ..     353     418 .. 0.99
   2 ?   -2.6   0.0         3   5.4e+03       7      29 ..    1058    1080 ..    1055    1083 .. 0.81
   3 ?   -3.0   0.0       3.9   6.9e+03      15      31 ..    1199    1214 ..    1198    1218 .. 0.72
   4 ?   -3.0   0.0       4.1   7.3e+03      18      34 ..    1362    1378 ..    1360    1380 .. 0.82

  Alignments for each domain:
  == domain 1  score: 106.1 bits;  conditional E-value: 3.5e-34
  Clathrin_H_link   1 gLpGaddlyvqqFeqllaqgnykeAakvAaespqgiLRtpetIqrfkqvpaqpgqlspllqYFgtL 66 
                      +LpGad+ly qqF+ql+ qgny +AakvAa+sp+giLRt+++I++fkq+pa pgq++p+lqYFgtL
       EPX72143.1 353 NLPGADNLYAQQFQQLMMQGNYGDAAKVAASSPRGILRTAQVIEQFKQLPAVPGQIAPILQYFGTL 418
                      8***************************************************************98 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 3
  Clathrin_H_link    7 dlyvqqFeqllaqgnykeAakvA 29  
                        l+ + F+ + + ++ +eA kv 
       EPX72143.1 1058 GLFEEAFKIYKSHQKHEEAMKVL 1080
                       57888899999999999999986 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 3.9
  Clathrin_H_link   15 qllaqgnykeAakvAae 31  
                       +++ +g+y+ Aa++  +
       EPX72143.1 1199 ECFDSGKYE-AARIMYS 1214
                       789999995.6676655 PP

  == domain 4  score: -3.0 bits;  conditional E-value: 4.1
  Clathrin_H_link   18 aqgnykeAakvAaespq 34  
                         + y +Aa + +e p+
       EPX72143.1 1362 HDQSYDNAAAIMMEEPE 1378
                       5689*******999987 PP

>> Clathrin-link  Clathrin, heavy-chain linker
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.7   0.2   9.2e-12   1.6e-08       2      24 .]     329     351 ..     328     351 .. 0.97

  Alignments for each domain:
  == domain 1  score: 33.7 bits;  conditional E-value: 9.2e-12
  Clathrin-link   2 dnIIPYIlntLnNpdLALrlAsR 24 
                    d+IIPY+ln+L + +LA+rlAsR
     EPX72143.1 329 DTIIPYVLNNLTDAGLAVRLASR 351
                    9*********************9 PP

>> Coatomer_WDAD  Coatomer WD associated region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.5   0.4     0.004       7.3      87     173 ..      45     132 ..      20     152 .. 0.81
   2 ?   -2.7   0.0       1.2   2.2e+03     243     265 ..     306     328 ..     272     331 .. 0.57
   3 !   11.7   0.0   5.5e-05     0.098     335     394 ..    1086    1148 ..    1025    1173 .. 0.85
   4 !   13.1   0.0   2.1e-05     0.037     337     388 ..    1233    1285 ..    1227    1315 .. 0.80

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.004
                    XXXXXXX.XXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXX CS
  Coatomer_WDAD  87 ssksvkifknfkekktksikleyqvdkifg...GalLgvksegsvsfYDweqgklvrridvkkvknVvwsd.dgelvalvskdtvyilsyn 173
                     +++v+i  ++++ + + +  + ++d+++     +++ +k ++ + ++D+e +  + +  +++ + V+w   + + + +v++++vy  s n
     EPX72143.1  45 GTNQVVI-VDLENPE-NVVRRPISADSVIMhpkKMIIALKAQKQLQVFDLEAKAKLNSFVMTQ-EVVYWTWiSDSTIGIVTDTSVYHWSLN 132
                    2567778.8999998.89999999*9999999999***********************99998.66666641468999*******987766 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1.2
                    XX..XXXXXXXXXXXXXXXXXXX CS
  Coatomer_WDAD 243 kgkenklylldkdgnvvsleidl 265
                    ++  n + +++++g+v s++i++
     EPX72143.1 306 HESVNGIMAVNRKGQVLSVSINP 328
                    33345566666666666666666 PP

  == domain 3  score: 11.7 bits;  conditional E-value: 5.5e-05
                     -HHHHHHHHHHH--HHHHHHHHHHHHHTT-HHHHHHHHHHTT...-HHHHHHHHHHHT-HHHH CS
  Coatomer_WDAD  335 nLelAlelakelddeekWkkLgdaAlsqgniklaeeayqkak...dfdkLllLylstgnkekL 394 
                      L+ A e a+  d++e+W++L++a l   +i+ a  +y ka+   ++++   L +  g+ e L
     EPX72143.1 1086 SLDRAEEYAEIVDQPEVWSRLAKAQLDGIRISEAISSYLKANdpsNYEEVIELSSRAGKYEDL 1148
                     6999*************************************9333355555555555555555 PP

  == domain 4  score: 13.1 bits;  conditional E-value: 2.1e-05
                     HHHHHHHHHH--HHHHHHHHHHHHHTT-HHHHHHH.HHHTT-HHHHHHHHHHH CS
  Coatomer_WDAD  337 elAlelakelddeekWkkLgdaAlsqgniklaeea.yqkakdfdkLllLylst 388 
                     + A+++a+++++ ++Wk++g+a ++q ++ la+ + ++ + + ++L +L  + 
     EPX72143.1 1233 QGAVDCARKANSIKVWKQVGTACIEQREFRLAQICgLNLIVHAEELTFLIRLY 1285
                     5699******************************9445556677777776554 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       4.1   7.3e+03       9      21 ..     489     501 ..     488     501 .. 0.86
   2 !    8.0   0.0    0.0018       3.2       4      24 ..     608     628 ..     606     632 .. 0.95
   3 ?   -2.9   0.0       5.3   9.6e+03       2      14 ..     872     884 ..     872     886 .. 0.85
   4 ?    0.1   0.0      0.58     1e+03      10      22 ..    1140    1152 ..    1137    1155 .. 0.86
   5 ?    1.0   0.0       0.3   5.4e+02       3      24 ..    1220    1241 ..    1219    1246 .. 0.88
   6 ?    5.4   0.1     0.012        21       7      28 ..    1283    1302 ..    1278    1325 .. 0.80
   7 ?   -1.3   0.0       1.6   2.9e+03       6      21 ..    1506    1521 ..    1505    1525 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 4.1
       TPR_7   9 ysrlGdyeeAiel 21 
                  s+lGd+ +++++
  EPX72143.1 489 LSELGDFNRLVTY 501
                 578******9997 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0018
       TPR_7   4 nLarlysrlGdyeeAielyeq 24 
                 ++a+l++r G  ++A+elye+
  EPX72143.1 608 AIASLCERAGLVQRALELYEK 628
                 79******************8 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 5.3
       TPR_7   2 LlnLarlysrlGd 14 
                 +++La +y + ++
  EPX72143.1 872 YDALAKIYIDSNN 884
                 689*****99876 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 0.58
       TPR_7   10 srlGdyeeAiely 22  
                  sr G+ye++i+++
  EPX72143.1 1140 SRAGKYEDLIKYL 1152
                  789********97 PP

  == domain 5  score: 1.0 bits;  conditional E-value: 0.3
       TPR_7    3 lnLarlysrlGdyeeAielyeq 24  
                  + La + + l +y+ A+++ ++
  EPX72143.1 1220 SMLATTLVYLSEYQGAVDCARK 1241
                  57999************99666 PP

  == domain 6  score: 5.4 bits;  conditional E-value: 0.012
       TPR_7    7 rlysrlGdyeeAielyeqsLal 28  
                  rly+++G+++e i+l e+  +l
  EPX72143.1 1283 RLYEDRGYFDEVISLMEA--GL 1302
                  79***************9..44 PP

  == domain 7  score: -1.3 bits;  conditional E-value: 1.6
       TPR_7    6 arlysrlGdyeeAiel 21  
                  a +y++ G++ + iel
  EPX72143.1 1506 AYIYRKNGRWIQSIEL 1521
                  679*******999997 PP

>> Vps39_1  Vacuolar sorting protein 39 domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0      0.25   4.4e+02      28      74 ..     481     526 ..     463     578 .. 0.76
   2 ?   -0.7   0.3      0.94   1.7e+03      14      45 ..     737     768 ..     730     774 .. 0.84
   3 ?   12.3   0.2   8.8e-05      0.16       5      82 ..    1023    1101 ..    1020    1142 .. 0.72
   4 ?   -1.7   0.0         2   3.5e+03      17      50 ..    1120    1153 ..    1112    1161 .. 0.72
   5 ?    0.9   0.0      0.29   5.3e+02       1      44 [.    1164    1208 ..    1164    1229 .. 0.83
   6 ?    0.3   0.1      0.47   8.4e+02       3      64 ..    1313    1375 ..    1311    1396 .. 0.79
   7 ?   -2.4   0.0       3.1   5.6e+03       6      40 ..    1402    1437 ..    1401    1453 .. 0.73

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.25
     Vps39_1  28 dlkdveeiLkkekkykeLidlYygkklheeALeLlkeladedeedee 74 
                  +++v  +L++  +++ L+ +  + +   + + Ll++l+   + d++
  EPX72143.1 481 VPNKVVMCLSELGDFNRLVTYTSQTSFTPDYVSLLQNLVRV-NPDQA 526
                 46788999999999999999999999999999999999884.22222 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.94
     Vps39_1  14 pklvgpLlrleNaCdlkdveeiLkkekkykeL 45 
                  ++v  ++r +N  ++++v++ Lk++k   +L
  EPX72143.1 737 FTEVERICRDNNVYNPEKVKNLLKEAKLADQL 768
                 56788899999*************99987766 PP

  == domain 3  score: 12.3 bits;  conditional E-value: 8.8e-05
     Vps39_1    5 LlkvYlktkpklvgpLlrleNaCdlkdveeiLkkekkykeLidlYygkklheeALeLlkelade.deedeedsslkgek 82  
                  L+   +k++++ v++ +    + d++++ ei  ++  ++e ++ Y++ ++heeA+++l+e + + d+ +e  + +++++
  EPX72143.1 1023 LFLTAIKADKSRVMEYIERLHNYDVEEISEIAVENGLFEEAFKIYKSHQKHEEAMKVLVEDIVSlDRAEEYAEIVDQPE 1101
                  666778888999999987777779********************************99986665566666666555554 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 2
     Vps39_1   17 vgpLlrleNaCdlkdveeiLkkekkykeLidlYy 50  
                  + + l+ +  +++++v e  +++ ky++Li++  
  EPX72143.1 1120 ISSYLKANDPSNYEEVIELSSRAGKYEDLIKYLF 1153
                  6667777777888888888889999999998653 PP

  == domain 5  score: 0.9 bits;  conditional E-value: 0.29
     Vps39_1    1 iDTaLlkvYlkt.kpklvgpLlrleNaCdlkdveeiLkkekkyke 44  
                  +D a+l  Y++t + +++  +l  +N  d+k v      + ky++
  EPX72143.1 1164 VDSAILVSYARTnQLAEMETFLIGSNVADVKAVGDECFDSGKYEA 1208
                  899*********77799999**********999776666666655 PP

  == domain 6  score: 0.3 bits;  conditional E-value: 0.47
     Vps39_1    3 TaLlkvYlktkpklvgpLlrle.NaCdlkdveeiLkkekkykeLidlYygkklheeALeLlke 64  
                  T L  +Y k+kp+ +++ l+l   + ++ +v +   +++ ++e + lY + +   +A  ++ e
  EPX72143.1 1313 TELAILYSKYKPERLMEHLKLFwGRLNMAKVVKACDQAHLWNEAVFLYVHDQSYDNAAAIMME 1375
                  77777899999999999999988899999999999*************877766666555544 PP

  == domain 7  score: -2.4 bits;  conditional E-value: 3.1
     Vps39_1    6 lkvYlktkpklvgpLlrle.NaCdlkdveeiLkkek 40  
                  l+ Yl+++p+l+ +Ll     + d   v +i +k++
  EPX72143.1 1402 LHFYLEQHPMLLTDLLAALtSRIDHARVIRIFEKSE 1437
                  678999999999999975446666666666666655 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.0      0.69   1.2e+03      11      22 ..     368     379 ..     366     381 .. 0.86
   2 ?    1.4   0.1      0.25   4.4e+02       5      26 ..     607     628 ..     604     628 .. 0.87
   3 ?   -3.5   0.0       9.1   1.6e+04      29      32 ..    1065    1068 ..    1058    1079 .. 0.53
   4 ?   -0.7   0.0       1.2   2.2e+03       1      27 [.    1100    1126 ..    1100    1126 .. 0.85
   5 ?   -0.3   0.0      0.88   1.6e+03       8      22 ..    1197    1211 ..    1195    1214 .. 0.84
   6 ?    4.1   0.0     0.035        63       4      27 ..    1219    1242 ..    1217    1246 .. 0.93
   7 ?   -0.5   0.0         1   1.9e+03       8      22 ..    1506    1520 ..    1503    1521 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.69
       TPR_2  11 yyklgdyeeAle 22 
                 ++ +g+y +A++
  EPX72143.1 368 LMMQGNYGDAAK 379
                 799*****9987 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.25
       TPR_2   5 ynlGlayyklgdyeeAleafek 26 
                  +++ +++++g  ++Ale++ek
  EPX72143.1 607 QAIASLCERAGLVQRALELYEK 628
                 678889999999********97 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 9.1
       TPR_2   29 eldP 32  
                  +++ 
  EPX72143.1 1065 KIYK 1068
                  4443 PP

  == domain 4  score: -0.7 bits;  conditional E-value: 1.2
       TPR_2    1 aealynlGlayyklgdyeeAleafekA 27  
                  +e++ +l++a +   +  eA+  + kA
  EPX72143.1 1100 PEVWSRLAKAQLDGIRISEAISSYLKA 1126
                  689999999999888889999999887 PP

  == domain 5  score: -0.3 bits;  conditional E-value: 0.88
       TPR_2    8 GlayyklgdyeeAle 22  
                  G+ ++ +g+ye A+ 
  EPX72143.1 1197 GDECFDSGKYEAARI 1211
                  78899********86 PP

  == domain 6  score: 4.1 bits;  conditional E-value: 0.035
       TPR_2    4 lynlGlayyklgdyeeAleafekA 27  
                  + +l+  + +l +y+ A+++ +kA
  EPX72143.1 1219 WSMLATTLVYLSEYQGAVDCARKA 1242
                  899********************9 PP

  == domain 7  score: -0.5 bits;  conditional E-value: 1
       TPR_2    8 GlayyklgdyeeAle 22  
                  +++y+k+g++ + +e
  EPX72143.1 1506 AYIYRKNGRWIQSIE 1520
                  89*******988876 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.1      0.58     1e+03       3      24 ..     360     381 ..     358     384 .. 0.87
   2 ?   -0.8   0.0       2.2     4e+03       9      42 ..     547     581 ..     543     583 .. 0.79
   3 ?    2.9   0.2      0.14   2.5e+02       5      25 ..     607     627 ..     605     628 .. 0.91
   4 ?   -2.4   0.0         7   1.3e+04      17      31 ..     656     670 ..     654     679 .. 0.85
   5 ?   -1.6   0.1       3.9     7e+03      13      43 ..     847     877 ..     840     878 .. 0.70
   6 ?   -1.6   0.0       4.1   7.3e+03      13      27 ..    1056    1070 ..    1051    1083 .. 0.62
   7 ?   -0.8   0.0       2.1   3.9e+03      13      42 ..    1069    1107 ..    1059    1111 .. 0.50
   8 ?   -2.7   0.0       8.7   1.6e+04      13      33 ..    1141    1163 ..    1136    1174 .. 0.67
   9 ?   -0.1   0.0       1.3   2.3e+03       4      27 ..    1219    1242 ..    1217    1254 .. 0.90
  10 ?    3.9   0.2     0.067   1.2e+02       7      42 ..    1281    1316 ..    1275    1318 .. 0.89

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.58
      TPR_14   3 allalaeallalGdpdeAiall 24 
                 ++++  + l+ +G++ +A++++
  EPX72143.1 360 LYAQQFQQLMMQGNYGDAAKVA 381
                 7889999***********9986 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 2.2
      TPR_14   9 eallalGdpdeAiallrralal.aPddaeawllla 42 
                 ++++ +   ++A a l +al++  P++  ++++l 
  EPX72143.1 547 DIFMSQNLVQQATAFLLDALKDdSPAHSHLQTRLL 581
                 5677788889999********62599988888876 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.14
      TPR_14   5 lalaeallalGdpdeAiallr 25 
                 +a+a++++++G  ++A++l++
  EPX72143.1 607 QAIASLCERAGLVQRALELYE 627
                 789****************98 PP

  == domain 4  score: -2.4 bits;  conditional E-value: 7
      TPR_14  17 pdeAiallrralala 31 
                 pde  ++lr++l+++
  EPX72143.1 656 PDEVYDYLREMLRTN 670
                 799999*****9986 PP

  == domain 5  score: -1.6 bits;  conditional E-value: 3.9
      TPR_14  13 alGdpdeAiallrralalaPddaeawlllaq 43 
                 ++ +++  + +l+ +l+ + +d++++ +la+
  EPX72143.1 847 RRNRLKLLLPYLETLLQSGSQDRAIYDALAK 877
                 5666666777777777777777777777776 PP

  == domain 6  score: -1.6 bits;  conditional E-value: 4.1
      TPR_14   13 alGdpdeAiallrra 27  
                  ++G ++eA ++++  
  EPX72143.1 1056 ENGLFEEAFKIYKSH 1070
                  567777777776654 PP

  == domain 7  score: -0.8 bits;  conditional E-value: 2.1
      TPR_14   13 alGdpdeAia.llrralalaP........ddaeawllla 42  
                    ++++eA++ l +++++l+         d++e+w +la
  EPX72143.1 1069 SHQKHEEAMKvLVEDIVSLDRaeeyaeivDQPEVWSRLA 1107
                  555666666634444444322112222235566666666 PP

  == domain 8  score: -2.7 bits;  conditional E-value: 8.7
      TPR_14   13 alGdpdeAiallrrala..laPd 33  
                  ++G++++ i++l  a +  + Pd
  EPX72143.1 1141 RAGKYEDLIKYLFMARSkmHEPD 1163
                  78999999998866655333555 PP

  == domain 9  score: -0.1 bits;  conditional E-value: 1.3
      TPR_14    4 llalaeallalGdpdeAiallrra 27  
                  + +la  l  l ++++A++++r+a
  EPX72143.1 1219 WSMLATTLVYLSEYQGAVDCARKA 1242
                  889******************998 PP

  == domain 10  score: 3.9 bits;  conditional E-value: 0.067
      TPR_14    7 laeallalGdpdeAiallrralalaPddaeawllla 42  
                  l ++++ +G +de i l ++ l l  ++ +++++la
  EPX72143.1 1281 LIRLYEDRGYFDEVISLMEAGLGLERAHMAFYTELA 1316
                  889*******************99999999999998 PP

>> TPPII_N  Tripeptidyl peptidase II N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.2   0.0        10   1.8e+04      84     104 ..      46      66 ..      39      95 .. 0.65
   2 ?   10.7   0.3   0.00032      0.58      63     123 ..    1026    1087 ..    1012    1093 .. 0.82
   3 ?   -4.3   0.1        10   1.8e+04      87     104 ..    1449    1466 ..    1447    1470 .. 0.85

  Alignments for each domain:
  == domain 1  score: -4.2 bits;  conditional E-value: 10
                 HHHHTTS-HHHHHHHHHHHHH CS
     TPPII_N  84 csqiakldlenAekiYnevva 104
                 + q++ +dlen e++    + 
  EPX72143.1  46 TNQVVIVDLENPENVVRRPIS 66 
                 678888899999987654333 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00032
                  XXXXX----HHHHHHHHHHHHHHHHTTS-HHHH..HHHHHHHHHH-TT-THHHHHHHHHHHHH CS
     TPPII_N   63 aspkkgkakaDeYaEslRDfqcsqiakldlenA..ekiYnevvaahPkHLaAhLlliqniess 123 
                  ++ k +k++  eY+E l ++   +i+ + +en   e+ + ++ + h kH +A  +l+++i s 
  EPX72143.1 1026 TAIKADKSRVMEYIERLHNYDVEEISEIAVENGlfEEAF-KIYKSHQKHEEAMKVLVEDIVSL 1087
                  7899**********************9988864224443.46689*************99875 PP

  == domain 3  score: -4.3 bits;  conditional E-value: 10
                  HTTS-HHHHHHHHHHHHH CS
     TPPII_N   87 iakldlenAekiYnevva 104 
                  i  l++e  ++ Yn+++ 
  EPX72143.1 1449 IQHLNIEAVNNAYNDLLI 1466
                  7889999*******9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1656 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       735  (0.040995); expected 358.6 (0.02)
Passed bias filter:                      509  (0.0283898); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.98u 0.30s 00:00:01.28 Elapsed: 00:00:00.49
# Mc/sec: 10161.57
//
Query:       EPX72144.1  [L=176]
Description: 60S ribosomal protein L20 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.3e-52  176.2   0.8    2.9e-52  175.9   0.8    1.1  1  Ribosomal_L18A  Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A


Domain annotation for each model (and alignments):
>> Ribosomal_L18A  Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.9   0.8   1.6e-56   2.9e-52       1     120 [.       3     125 ..       3     126 .. 0.99

  Alignments for each domain:
  == domain 1  score: 175.9 bits;  conditional E-value: 1.6e-56
                     -EEEEEEEEEEET....................................................................TEEEEEEEEEEESS CS
  Ribosomal_L18A   1 lkeYeVvGrklpsekepepkvyrmrifapnevvak...wyflkklkkvkkanGeilavkkieekkptkvknygiwlrydsrsgthnfykeyrdlt 92 
                     lkeY+VvGrk+p+e+ep pk+yrmr+fapne vak   wyflk+++kvkka+Gei+a+++i+e kp++ k +giw+rydsrsgthn+yke+rd+t
      EPX72144.1   3 LKEYQVVGRKVPTEQEPVPKLYRMRLFAPNESVAKsryWYFLKMINKVKKATGEIVAINQIHEPKPLQPKVFGIWIRYDSRSGTHNMYKEFRDTT 97 
                     69********************************************************************************************* PP

                     HHHHHHHHHHHHHHHS---GGGEEEEEE CS
  Ribosomal_L18A  93 eegaveqvYselgsrhrakrssIqIekv 120
                     + gav+++Y+++++rhra+ +sI+I+kv
      EPX72144.1  98 RVGAVQAMYQDMAARHRARFRSIRILKV 125
                     **************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       420  (0.0234257); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 1146.47
//
Query:       EPX72145.1  [L=237]
Description: hypothetical protein SOCG_04838 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.1e-53  180.0   0.1    6.3e-53  179.8   0.1    1.0  1  RMI1_N    RecQ mediated genome instability protein


Domain annotation for each model (and alignments):
>> RMI1_N  RecQ mediated genome instability protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  179.8   0.1   3.5e-57   6.3e-53       3     215 ..      12     219 ..      10     221 .. 0.90

  Alignments for each domain:
  == domain 1  score: 179.8 bits;  conditional E-value: 3.5e-57
      RMI1_N   3 srkhlpvspeWleacvesleeepn.lplsallktvleqlLasDltestnsssvlpaniaeqrksesspalkgpvvvQvldiedigsSaysqlealeave 100
                 +   +p++++Wl+ +v++l ++++ +  + +++ +l  + asD+++st+ +s    +i++q++++    l++p++vQv++i++ig+S++sqle l++ e
  EPX72145.1  12 Q-RGIPLKNSWLSLVVNHLVHQRKyARENITIELILPFFIASDIRSSTTGASAASYDISNQHNIT----LSNPLLVQVVRIREIGKSIVSQLEYLNQLE 105
                 3.49****************99444899999**********************************....****************************** PP

      RMI1_N 101 rgeetrgrevirte.saaaasakadeenseekeeaqats.seskkrrmlkLeLtDg.gqkvkAiElkpikglslklaiGvKllLkggvkvrrGvlLLep 196
                 ++++ +g+++ir   ++++++++ d++  +e++ea       +  + m++L+L+D+ gq+++++E k i+g++l++++G+Kll++ +++++rG+lLL+p
  EPX72145.1 106 ERKKLKGQQIIRLVdEEDREDKEGDDSGIAEAQEA---IfDGKGFKCMCRLVLEDAnGQRFYGMEWKSIPGIQLDTNLGTKLLIQ-NAQIKRGTLLLTP 200
                 *************5466666666666664443333...2457899****************************************.************* PP

      RMI1_N 197 envkvlGGeveeldkawke 215
                 en+++lGGe++e+++++ +
  EPX72145.1 201 ENTEILGGEIDEWNREYFP 219
                 ***************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       627  (0.0349713); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.29s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 1534.65
//
Query:       EPX72146.1  [L=458]
Description: adenine DNA glycosylase Myh1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-20   74.0   0.0    2.4e-20   73.0   0.0    1.5  1  HhH-GPD        HhH-GPD superfamily base excision DNA repair p
    4.9e-14   52.2   0.1      1e-13   51.2   0.1    1.4  1  NUDIX_4        NUDIX domain
    4.4e-06   26.9   4.1    1.1e-05   25.6   4.1    1.7  1  EndIII_4Fe-2S  Iron-sulfur binding domain of endonuclease III
    2.1e-05   24.2   0.1    4.2e-05   23.2   0.1    1.5  1  HHH            Helix-hairpin-helix motif


Domain annotation for each model (and alignments):
>> HhH-GPD  HhH-GPD superfamily base excision DNA repair protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.0   0.0   5.4e-24   2.4e-20       1     106 [.      65     200 ..      65     202 .. 0.96

  Alignments for each domain:
  == domain 1  score: 73.0 bits;  conditional E-value: 5.4e-24
                 HHHHHHTTS-HHHHHHHHHHHHHHHSHCSHHHHHHSH.HHHHHHHHTTSTTHHHHHHHHHHHHHHHH................................ CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxx................................ RF
     HhH-GPD   1 vsailsqqtsderanriierlferfgfptpedladad.eekLrelirelGfyrrKakyikelArilv................................ 66 
                 vs+i+ qqt++e+++r++++++e+   pt++++a+ad  ++++ l++++Gfy +++k+++++++ l+                                
  EPX72146.1  65 VSEIMLQQTRVETVKRYYNKWMET--LPTLQACAEADyNTQVMPLWSGMGFY-TRCKRLHQACQYLAglkpkeiplsaekwskdipgvgpytagavlsi 160
                 89**********************..7*************************.********************************************** PP

                 S-SSS--TTSHHHHHHHHHHTTSSSSTTHHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
     HhH-GPD  67 gkpdvlivvDvhvrrilkrlrsikekktkkkvekkleell 106
                 + ++++ +vD +v r+l+r  +i+ + +k k+ + ++el 
  EPX72146.1 161 AWKQPTGIVDGNVIRVLSRALAIHSDCSKGKANTLIWELA 200
                 54578999*************************9999985 PP

>> NUDIX_4  NUDIX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.2   0.1   2.2e-17     1e-13      11     101 ..     316     417 ..     309     422 .. 0.68

  Alignments for each domain:
  == domain 1  score: 51.2 bits;  conditional E-value: 2.2e-17
                 EEEEE--TTSSSTT-EE-SEEE-TTS-.HHH...........HHHHHHHS-EEE.EEEEEEEEEEETTEEEEEE.EEEEEEE.S..---EEEEEEGGGG CS
     NUDIX_4  11 vllekRpekgllggLwefPggeeegee.lee...........alareelgieve.elepgtvkHvftHfrltlt.vylvrveegeeapaelrwvtpeel 95 
                 +l++kRp  gll+gLw fP++e  +++ +++           +l++e+l   v+ + ++g++ H+f+H+r t + +y++ ++ ++++++++ w+++++l
  EPX72146.1 316 FLIRKRPTVGLLAGLWDFPTMEYGEDAwPKDieaefkrclnlWLQKENLC--VKkHQSRGRYLHIFSHIRKTSHvFYAIVTP-ETKTKEDFFWISQSDL 411
                 89*****************8773333334322223444333344444444..33244569999***********55555444.555666********** PP

                 GGS--- CS
     NUDIX_4  96 eeyalp 101
                 + +++ 
  EPX72146.1 412 DHVGMC 417
                 *99986 PP

>> EndIII_4Fe-2S  Iron-sulfur binding domain of endonuclease III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   4.1   2.4e-09   1.1e-05       1      17 []     224     240 ..     224     240 .. 1.00

  Alignments for each domain:
  == domain 1  score: 25.6 bits;  conditional E-value: 2.4e-09
  EndIII_4Fe-2S   1 CTARkPkCeaCPLaDlC 17 
                    CT+++P+C  CP++D+C
     EPX72146.1 224 CTPQSPQCSTCPVSDIC 240
                    ***************** PP

>> HHH  Helix-hairpin-helix motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.1   9.4e-09   4.2e-05       5      30 .]     134     160 ..     131     160 .. 0.87

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 9.4e-09
                 HHTSSHHHHHT.STT-SHHHHHHHHHH CS
         HHH   5 lipasreeLla.lPGVGpktAeaIlsy 30 
                 +ip s e + + +PGVGp+tA+a+ls+
  EPX72146.1 134 EIPLSAEKWSKdIPGVGPYTAGAVLSI 160
                 577788888888*************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (458 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       564  (0.0314574); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.45
# Mc/sec: 3029.35
//
Query:       EPX72147.1  [L=526]
Description: aspartic protease Sxa1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.9e-62  209.5   8.2      1e-61  209.1   8.2    1.1  1  Asp       Eukaryotic aspartyl protease
    8.2e-12   45.7   0.1    2.5e-11   44.1   0.1    1.9  1  TAXi_N    Xylanase inhibitor N-terminal
    2.8e-06   27.2   0.9    0.00012   21.9   0.1    3.3  2  TAXi_C    Xylanase inhibitor C-terminal


Domain annotation for each model (and alignments):
>> Asp  Eukaryotic aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  209.1   8.2   1.7e-65     1e-61       1     314 [.      78     434 ..      78     435 .. 0.87

  Alignments for each domain:
  == domain 1  score: 209.1 bits;  conditional E-value: 1.7e-65
                 EEEEEEEETTTTEEEEEEEETT--SEEEEBTT....................ESTSHCHHTSS-B-GGG-TT-EEEEEEE.EEE.CTTS.EEEEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....................xxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxx.xxxx.xxxxxxxxx RF
         Asp   1 eYfgeisiGtpeqkftvifDTGSsdlWVpssk....................ckkssackshstydpskSstykkngksl.sis.YGdg.svsGflsqd 76 
                 +Yf++i +G  +++f++++DTGS+++WV++++                    ++++s c+++++yd s++s+  + ++ +  ++ YGd+ ++ G+++ d
  EPX72147.1  78 SYFASIIMGEKKKNFSLTLDTGSPYTWVTANNitaldpsefsqvemapgkstSEIQSICSNYTCYDFSDTSAKITGSNIIgFLTgYGDNtTAIGYNMVD 176
                 6***********************************************9987666889***********9998765555566666************** PP

                 EEEETTEEEEEEEEEEEEEESSHHHTTSSSSEEEE-S....-GGGSCGG....SCCH..HHHHHHTTSSSSSEEEEEE-STTSSEEEEEESSEEGGGEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxx....xxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         Asp  77 tvkvggltvknqefgeatkepgstflaakfdGiLGlg....fkeisvee....atpv..fdnlvsqglikepvfsvylnreeeeggeivfGgvDeskyk 165
                 + +++gl + n++fg at+e++s+++++ + Gi+Gl+    ++ +++++     +p+  +++l+  gli++  f++yln   e+ ge++fGg++++k+ 
  EPX72147.1 177 KAYFAGLALDNFTFGVATREYDSQQISV-TPGIIGLSpgmtITGVTSNNravaYSPPtiVEQLYTSGLINSYSFGIYLN---EQEGELIFGGYNKAKVD 271
                 **********************988777.9******98877555555555443333346788****************9...999************** PP

                 EEEEEEEESS.TSSTEEEEEEEEETTEEE.......EEEEEEEEE..............EETTCSSEEEEHHHHHHHHHHHTTEEEETTCEEEEETTGG CS
                 xxxxxxxxxx.xxxxxxxxxxxxxxxxxx.......xxxxxxxxx..............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         Asp 166 Gsltyvpvts.kgywqielesvtvggktv.......lcssgcqai..............lDtGTsllalptsivekiakaigakksesegeyvvdCdsl 242
                 G++++++++  ++++++ les+++ + +        +       +              +DtGT+ll++p+++ve ia+ +++  s++ g+ vv+C+s+
  EPX72147.1 272 GNFHWLDISGeSNFYSVFLESLSLPDPSNqqnskklT-------FekrdsslqvnqnttVDTGTVLLYMPDNVVEGIADRYSGFISSQ-GYPVVYCNSF 362
                 *********9788899999999997776622223331.......244555557778888************************99999.********** PP

                 GGSEEEEEEE.TTEEEEEEGGGGEEEES.SSTTSEEEESEEECCTSSSEEEEHHHHTTEEEEEETTTTEEEEEE CS
                 xxxxxxxxxx.xxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         Asp 243 sslpdisfti.ggakitvpvselvlkee.eseesqCilglvseeegdlwiLGdvFlrsayvvfdldnnrvglAe 314
                 s++++++f++ g+a+++v+ +elv+ +e  ++++ C+l++   ++ d+ iLG++Fl+++y  +d+d++++g+A+
  EPX72147.1 363 SDSDHVQFNFqGDASFQVSIKELVIAREpYQGDEVCYLAF--VPSPDTCILGQYFLQNVYAAYDWDAQKIGFAN 434
                 **********7889**********8876245569******..667789*************************7 PP

>> TAXi_N  Xylanase inhibitor N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.1   0.1   4.3e-15   2.5e-11       1     177 [.      79     263 ..      79     264 .. 0.83

  Alignments for each domain:
  == domain 1  score: 44.1 bits;  conditional E-value: 4.3e-15
      TAXi_N   1 YlvsisiGtppqplklvvDtGsdltWvqCkpcka..cssqkkpvfdpsksstykavpcssslCkaceasssaksgsssstceyeisygadgssssGvla 97 
                 Y++si +G+ +++++l++DtGs +tWv+ ++ +a   s+ +++   p ks++  +  cs+ +C   + s ++++ + s+   + + yg d++++ G  +
  EPX72147.1  79 YFASIIMGEKKKNFSLTLDTGSPYTWVTANNITAldPSEFSQVEMAPGKSTSEIQSICSNYTCY--DFSDTSAKITGSNIIGFLTGYG-DNTTAIGYNM 174
                 9****************************99998766666778889999***************..67888889999**********8.999******* PP

      TAXi_N  98 tdtltlsstdgksvkvpnlvfGCgk.snlgglaagadGilGLGrgk................lSlvsqlaskg.slgnkFsyCLssssssssgvlffG 177
                  d+  +      +  ++n++fG ++ + +++  + + Gi+GL+ g                   +v+ql ++g + +  F+++L    ++++g l+fG
  EPX72147.1 175 VDKAYF-----AGLALDNFTFGVATrEYDSQQISVTPGIIGLSPGMtitgvtsnnravayspPTIVEQLYTSGlINSYSFGIYL----NEQEGELIFG 263
                 ******.....899*********998666666777********98777777777777776666666666666645556677777....6667777777 PP

>> TAXi_C  Xylanase inhibitor C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1     0.087   5.2e+02      27      47 ..      88     108 ..      80     156 .. 0.66
   2 !   21.9   0.1     2e-08   0.00012      30     160 ..     319     433 ..     285     434 .. 0.72

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.087
                 S----SEEE-SSSSSEEE-HH CS
      TAXi_C  27 ktgsggtvlstgtpytvletd 47 
                 k+++   +l+tg+pyt ++  
  EPX72147.1  88 KKKNFSLTLDTGSPYTWVTAN 108
                 566777889999999977655 PP

  == domain 2  score: 21.9 bits;  conditional E-value: 2e-08
                 --SEEE-SSSSSEEE-HHHHHHHHHHHHHTS-GG...GE---TT-S-EEETTS......-S----EEEEESSS-EEEE-GGGGEEE-S...SSEEE.E- CS
      TAXi_C  30 sggtvlstgtpytvletdvYralvkafakelaaekvkrvaavkpfelCynsselgstragpavPtitlvleggaewtisgenllvkve...ggvvC.la 124
                 + +t+++tgt + ++++ v + +++ ++  ++++++       p  +C + s             ++++++g+a++++s ++l++ +e   g+ vC la
  EPX72147.1 319 NQNTTVDTGTVLLYMPDNVVEGIADRYSGFISSQGY-------PVVYCNSFSD---------SDHVQFNFQGDASFQVSIKELVIAREpyqGDEVCyLA 401
                 456666666666666666666666666666666543.......3445555555.........5689******************999855445888689 PP

                 EEE--S--SSSEEE-HHHHBTS-EEEETTTTEEEEE CS
      TAXi_C 125 fvesgvagesavviGglqlednllvFDleksrlgFs 160
                 fv s      + ++G++ l++++  +D +++++gF+
  EPX72147.1 402 FVPS----PDTCILGQYFLQNVYAAYDWDAQKIGFA 433
                 ****....99*************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (526 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       573  (0.0319594); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 3572.81
//
Query:       EPX72148.1  [L=518]
Description: U3 snoRNP-associated protein Rrp9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.9e-20   71.2   9.9      4e-05   24.3   0.0    5.5  5  WD40             WD domain, G-beta repeat
    0.00012   20.8   0.0       0.16   10.6   0.0    2.5  3  Nup160           Nucleoporin Nup120/160
  ------ inclusion threshold ------
      0.033   13.5   0.0        1.4    8.2   0.0    2.3  2  WD40_like        WD40-like domain
      0.067   13.5   0.1        3.9    7.8   0.1    3.3  4  ANAPC4_WD40      Anaphase-promoting complex subunit 4 WD40 do
       0.24   11.2   1.2       0.56   10.0   1.2    1.6  1  Motilin_ghrelin  Motilin/ghrelin
       0.29   11.7   2.3       0.51   10.9   2.3    1.3  1  YABBY            YABBY protein


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.2   5.5e-07    0.0016       9      36 ..     199     227 ..     193     229 .. 0.88
   2 !   12.6   0.1   6.7e-05       0.2       4      38 .]     236     271 ..     233     271 .. 0.84
   3 !   11.6   0.0   0.00014      0.42       6      38 .]     280     313 ..     275     313 .. 0.79
   4 !    5.9   0.1    0.0086        26      13      38 .]     340     364 ..     326     364 .. 0.70
   5 !   24.3   0.0   1.3e-08     4e-05      12      38 .]     406     432 ..     393     432 .. 0.89

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 5.5e-07
                 SS.SSEEEEEEETTSSEEEEEETTSEEEE CS
        WD40   9 GH.ssvtslafspdgawlasGsdDgtvri 36 
                  H   +t+l  s dg+w+++G+ D+ + +
  EPX72148.1 199 DHvAEITCLTISNDGRWVVTGGLDHRIVV 227
                 58777********************9976 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 6.7e-05
                 EEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 
                 ++ ++ H + + +laf +  + ++s+s D+++++W+
  EPX72148.1 236 QHCWKHHRDvILALAFRKGTNEMFSASADRSIKVWS 271
                 67778785547***99999999999*99*******5 PP

  == domain 3  score: 11.6 bits;  conditional E-value: 0.00014
                 EEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   6 tltGHss.vtslafspdgawlasGsdDgtvriWd 38 
                 tl GH++ v++++  +  + ++ G++D++ r+W+
  EPX72148.1 280 TLFGHQDiVYDVDAFSQERCITVGGRDRSSRLWK 313
                 677**6647****6666677789**********6 PP

  == domain 4  score: 5.9 bits;  conditional E-value: 0.0086
                 EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  13 vtslafspdgawlasGsdDgtvriWd 38 
                 v ++   ++ + +++Gsd+g + +W+
  EPX72148.1 340 VDCVTMVDE-NHFITGSDNGVIALWS 364
                 555544444.44569**********5 PP

  == domain 5  score: 24.3 bits;  conditional E-value: 1.3e-08
                 SEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  12 svtslafspdgawlasGsdDgtvriWd 38 
                 ++t+l+  p+ ++++sGs+Dgt+r+W+
  EPX72148.1 406 WITCLRALPYANLFVSGSWDGTIRLWK 432
                 39************************6 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.0       1.5   4.4e+03     296     324 ..     155     180 ..     154     187 .. 0.72
   2 !    7.5   0.0   0.00045       1.4     226     255 ..     252     280 ..     236     297 .. 0.84
   3 !   10.6   0.0   5.2e-05      0.16     222     330 ..     339     455 ..     314     465 .. 0.75

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 1.5
                 E--GGG-EEEEEEEEEEE-...SSSEEEE CS
      Nup160 296 yspssggefkvwkvkkedtsvslglvdlf 324
                 ys++++g  + wk+  ed++++   vd  
  EPX72148.1 155 YSADKSGLVQKWKILNEDSEGG---VDSS 180
                 8999999999999999988544...4443 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.00045
                 ...TTTEEEEEETT-EEEEEETTTTEEEEE CS
      Nup160 226 veigqtylfalsrdgkLrvWnlltgkclat 255
                  + g +  f++s d+ ++vW+l++++ ++t
  EPX72148.1 252 RK-GTNEMFSASADRSIKVWSLDSMSYVET 280
                 44.88889******************9998 PP

  == domain 3  score: 10.6 bits;  conditional E-value: 5.2e-05
                 ET......TTTEEEEEETT-EEEEEETTTTEEEEEEE--...........-SSSTTS--SSEESEEESSSSEEEE..........E--GGG-EEEEEEE CS
      Nup160 222 avavvei.gqtylfalsrdgkLrvWnlltgkclatidll..........rdeeaqdessskstldpaesslirvsdggqsylvvtyspssggefkvwkv 309
                 +v++v++ ++++  + s +g++ +W+l+ +k+++t  l           r   ++ +  s s+ +p++  ++++    ++ l v  s s +g++ +wk+
  EPX72148.1 339 SVDCVTMvDENHFITGSDNGVIALWSLQRKKPVYTYPLAhgldtplapeR--HSAEKTPSESSTPPQPRWITCLRALPYANLFV--SGSWDGTIRLWKI 433
                 567777779**********************************9999653..44444444555677777777777445566555..9999********9 PP

                 EEEE-....SSSEEEEES-S-- CS
      Nup160 310 kkedtsvs.lglvdlfleqtiv 330
                  + + s +  +l+  ++++ i+
  EPX72148.1 434 ADGLRSFEpVELERPLATKSII 455
                 9999888777776666655555 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.018        53       2      52 ..     203     253 ..     202     283 .. 0.78
   2 ?    8.2   0.0   0.00046       1.4       3      74 ..     288     369 ..     285     377 .. 0.75

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.018
   WD40_like   2 eiYsidiskkgslilyGgkddkctvlkleslesvsivesfedSvifvklld 52 
                 ei  + is++g  ++ Gg d+++ v + e+l+     ++ +d ++   + +
  EPX72148.1 203 EITCLTISNDGRWVVTGGLDHRIVVRDSETLTAQHCWKHHRDVILALAFRK 253
                 6778899************************99999988888887666655 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.00046
   WD40_like   3 iYsidiskkgslilyGgkddkctvlkles.........lesvsives.fedSvifvklldddlilvvtlDGtillsllenee 74 
                 +Y +d   +   i +Gg+d   ++ k+           ++s+ +  + +e Sv  v ++d+++++ ++  G i l  l+ ++
  EPX72148.1 288 VYDVDAFSQERCITVGGRDRSSRLWKIVEesqlvfrsgGNSIKMTGGyMEGSVDCVTMVDENHFITGSDNGVIALWSLQRKK 369
                 899**999999********999999864411111111134455555525679*********************998888766 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.1    0.0013       3.9      34      89 ..     197     251 ..     189     254 .. 0.86
   2 ?    2.5   0.0      0.06   1.8e+02      45      84 ..     238     278 ..     229     286 .. 0.75
   3 ?    0.4   0.0      0.27     8e+02      49      80 ..     347     378 ..     314     411 .. 0.76
   4 ?   -0.7   0.0      0.62   1.9e+03      41      70 ..     407     436 ..     389     441 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0013
  ANAPC4_WD40  34 edkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                  + ++  e+++L  ++dg+  + +  d ++ + d+e+ +  h ++ +++  +  l +
   EPX72148.1 197 DRDHVAEITCLTISNDGRWVVTGGLDHRIVVRDSETLTAQHCWKHHRD-VILALAF 251
                  5567789********************************999999998.4777766 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.06
  ANAPC4_WD40  45 aWkp.dgklLavaysdgevrlldaesgkvvhslsvksekav 84 
                  +Wk+  + +La a+ +g+ ++++a+  + ++ +s +s + v
   EPX72148.1 238 CWKHhRDVILALAFRKGTNEMFSASADRSIKVWSLDSMSYV 278
                  67651466789999999999999998888888877776555 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.27
  ANAPC4_WD40  49 dgklLavaysdgevrlldaesgkvvhslsvks 80 
                  d++ +  + ++g + l + + +k v +++ ++
   EPX72148.1 347 DENHFITGSDNGVIALWSLQRKKPVYTYPLAH 378
                  556667899999********999999988765 PP

  == domain 4  score: -0.7 bits;  conditional E-value: 0.62
  ANAPC4_WD40  41 vrsLaWkpdgklLavaysdgevrlldaesg 70 
                  +++L+  p  +l++ +  dg++rl ++ +g
   EPX72148.1 407 ITCLRALPYANLFVSGSWDGTIRLWKIADG 436
                  67777777889999999******9988776 PP

>> Motilin_ghrelin  Motilin/ghrelin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   1.2   0.00019      0.56       2      24 ..       4      24 ..       4      24 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00019
  Motilin_ghrelin  2 PiFTssElQKmQERErNKgqkKs 24
                     P+FT +E++K     rN  qkKs
       EPX72148.1  4 PFFTRPEHRKRK--ARNAAQKKS 24
                     9*********65..788888887 PP

>> YABBY  YABBY protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   2.3   0.00017      0.51      64     129 ..      19      86 ..       3     103 .. 0.57

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00017
       YABBY  64 qlel..ksellskelassskssekskksalasssseqeeeeeekvvnrppekrqRvPsaYnrFikeei 129
                 ++++  + ++++ + +s  + + ++++++  + ++ + +ee+e  ++ ++ekr R+   Y   ik+ei
  EPX72148.1  19 AAQKksTASKKKPQNESRDEDLASISSESDIEREQYDPDEENEDAHENAAEKRLRIAKDYLDQIKNEI 86 
                 111100111111122222222222222222333333445555689999*******************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (518 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1350  (0.075297); expected 358.6 (0.02)
Passed bias filter:                      817  (0.0455686); expected 358.6 (0.02)
Passed Vit filter:                       101  (0.00563333); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.68u 0.31s 00:00:00.99 Elapsed: 00:00:00.44
# Mc/sec: 3515.04
//
Query:       EPX72149.1  [L=353]
Description: geranylgeranyltransferase I beta subunit Cwg2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.5e-32  109.0   3.6    4.1e-10   39.2   0.1    4.8  5  Prenyltrans  Prenyltransferase and squalene oxidase repeat


Domain annotation for each model (and alignments):
>> Prenyltrans  Prenyltransferase and squalene oxidase repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0      0.42   7.6e+03      26      40 ..      95     109 ..      87     113 .. 0.76
   2 !   15.4   0.0   6.3e-07     0.011       1      43 [.     119     164 ..     119     165 .. 0.93
   3 !   39.2   0.1   2.3e-14   4.1e-10       1      43 [.     169     211 ..     169     211 .. 0.94
   4 !   37.0   0.1   1.2e-13   2.1e-09       1      44 []     239     282 ..     239     282 .. 0.96
   5 !   14.8   0.0   9.7e-07     0.017      13      41 ..     300     328 ..     295     328 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 0.42
                  SSBBHHHHHHHHHHH CS
  Prenyltrans  26 sesdtyytywalaaL 40 
                   e+ +++t +a++ L
   EPX72149.1  95 QEPQLAATSFAISNL 109
                  478889999998755 PP

  == domain 2  score: 15.4 bits;  conditional E-value: 6.3e-07
                  HHHHHHHHHHHHHSHTTS-BBSSTTS...SBBHHHHHHHHHHHHHC CS
  Prenyltrans   1 idvekavefLlscQnedGGwggrpgs...esdtyytywalaaLall 43 
                  id++ + +fL  cQ + G++ + +     + d+++ y a++++ ll
   EPX72149.1 119 IDKQAVEQFLSLCQLPGGHFKSTASTmccDQDMRQLYLATTIATLL 164
                  689999*****************777**************999988 PP

  == domain 3  score: 39.2 bits;  conditional E-value: 2.3e-14
                  HHHHHHHHHHHHHSHTTS-BBSSTTSSBBHHHHHHHHHHHHHC CS
  Prenyltrans   1 idvekavefLlscQnedGGwggrpgsesdtyytywalaaLall 43 
                  ++++  ++++ +cQn++GG+++ p  e+++++t++ala+L+ll
   EPX72149.1 169 PHTKLSLQYIQKCQNYEGGFSLTPYAEAHAGATFCALASLKLL 211
                  5777889*********************************997 PP

  == domain 4  score: 37.0 bits;  conditional E-value: 1.2e-13
                  HHHHHHHHHHHHHSHTTS-BBSSTTSSBBHHHHHHHHHHHHHCT CS
  Prenyltrans   1 idvekavefLlscQnedGGwggrpgsesdtyytywalaaLallG 44 
                  +d+++++ +L+++Q+ +GG++gr +++ dt+y+yw+  +L llG
   EPX72149.1 239 PDKKRLLLWLINRQQSSGGFNGRTNKDHDTCYSYWVQGSLQLLG 282
                  68999999********************************9987 PP

  == domain 5  score: 14.8 bits;  conditional E-value: 9.7e-07
                  HSHTTS-BBSSTTSSBBHHHHHHHHHHHH CS
  Prenyltrans  13 cQnedGGwggrpgsesdtyytywalaaLa 41 
                  +Q++ GG++  pg  +d+ ++  +l aLa
   EPX72149.1 300 TQHKFGGFSKIPGEFPDVLHSSLGLYALA 328
                  34488***********************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (353 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       303  (0.0169); expected 358.6 (0.02)
Passed bias filter:                      275  (0.0153383); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.47
# Mc/sec: 2257.85
//
Query:       EPX72150.1  [L=303]
Description: DNAJ domain-containing protein Erj5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-15   57.4   0.7    5.4e-15   55.3   0.1    2.3  2  DnaJ      DnaJ domain


Domain annotation for each model (and alignments):
>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.3   0.1     3e-19   5.4e-15       1      63 []      41     100 ..      41     100 .. 0.98
   2 ?   -0.6   0.0     0.081   1.4e+03      23      38 ..     234     249 ..     232     270 .. 0.67

  Alignments for each domain:
  == domain 1  score: 55.3 bits;  conditional E-value: 3e-19
                 HHHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHHHHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ   1 dyYeiLgvskdasedeIkkaYrklalkyHPDknpkdpeaeekFkeineAyevLsdpekRkqYD 63 
                 ++Ye+L+vs++as +eI kaYrk+++ yHPDkn   p+  e +  +    ++L + e Rk+YD
  EPX72150.1  41 TFYELLEVSPKASVKEINKAYRKKSILYHPDKN---PSTGELYTLLGLIVNILRNTETRKRYD 100
                 58*******************************...9999**********************9 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.081
                 HHHHHHSTTTSCCHHH CS
        DnaJ  23 klalkyHPDknpkdpe 38 
                 +l+l++ P k   ++ 
  EPX72150.1 234 TLVLRWFPKKDHPEEA 249
                 5778888887744332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (303 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1390  (0.077528); expected 358.6 (0.02)
Passed bias filter:                      704  (0.039266); expected 358.6 (0.02)
Passed Vit filter:                        70  (0.00390429); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.29s 00:00:00.82 Elapsed: 00:00:00.45
# Mc/sec: 2002.57
//
Query:       EPX72151.1  [L=162]
Description: rab GTPase binding protein upregulated in meiosis II [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-09   37.1   4.1    2.8e-09   36.8   4.1    1.1  1  PRA1      PRA1 family protein
  ------ inclusion threshold ------
        7.9    5.3   7.7          8    5.3   0.6    2.0  2  Pex24p    Integral peroxisomal membrane peroxin


Domain annotation for each model (and alignments):
>> PRA1  PRA1 family protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.8   4.1   3.1e-13   2.8e-09      17     133 ..      39     153 ..      31     159 .. 0.89

  Alignments for each domain:
  == domain 1  score: 36.8 bits;  conditional E-value: 3.1e-13
        PRA1  17 rfslPkslskatsRvkkNllyfrtNYlivvllvlllslltnplslivllllvlawlflyflr....seplvlfgrelsdrvvlivllvvsvlllfltga 111
                 ++slP  l+ ++ R ++N++ +   Y+i++    l+++++ p+sl++l++ v++ ++ y +     +e++     +++ r ++ +++ +++++ +++ +
  EPX72151.1  39 KVSLP-RLDAIAPRTQYNFQKYAFYYAIFFCGSWLFTFFWYPFSLLALMVGVFLSFIAYAIGdisiDESI-----QVKYRYTVSAISSLTLMVTIFLVP 131
                 56777.7889999*************************************99999999996644467777.....8899999***************** PP

        PRA1 112 vlvllwalliglllvllHAsfr 133
                 ++ ll++l++   + l+HA++ 
  EPX72151.1 132 FSRLLLSLFLISGALLAHATLT 153
                 *******************986 PP

>> Pex24p  Integral peroxisomal membrane peroxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   1.3    0.0024        21     146     186 ..      52      92 ..      42      97 .. 0.85
   2 ?    5.3   0.6    0.0009         8      45      83 ..     118     155 ..     101     161 .. 0.70

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.0024
      Pex24p 146 kdenlstllfltllltpililllsrlipwrlillvlgaill 186
                 ++ n+++  f+  + +   +l+++ + p +l+ l++g++l 
  EPX72151.1  52 TQYNFQKYAFYYAIFFCGSWLFTFFWYPFSLLALMVGVFLS 92 
                 6788999999999999999999999************7765 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.0009
      Pex24p  45 lsfllvytficlvpylelvvlplllllfvvmvpaylyrh 83 
                 +s l ++++i lvp+  l+ l l+l++ +++  a+l+ h
  EPX72151.1 118 ISSLTLMVTIFLVPFSRLL-LSLFLISGALLAHATLTPH 155
                 4666777777777777777.7777777777777777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       886  (0.0494171); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 1121.69
//
Query:       EPX72152.1  [L=526]
Description: mannosyl-oligosaccharide 1,2-alpha-mannosidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   6.4e-157  523.1   4.7   7.3e-157  522.9   4.7    1.0  1  Glyco_hydro_47  Glycosyl hydrolase family 47


Domain annotation for each model (and alignments):
>> Glyco_hydro_47  Glycosyl hydrolase family 47
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  522.9   4.7  4.1e-161  7.3e-157       2     457 ..      53     517 ..      52     518 .. 0.93

  Alignments for each domain:
  == domain 1  score: 522.9 bits;  conditional E-value: 4.1e-161
                     HHHHHHHHHHHCTTSSEEETTTTEEE-SS..SS-CCHHHHHHHHHHCCHHHHHHHHHHHHHHC----S.SS.EEEHHHHHHHHHHHHHHHHHHH. CS
  Glyco_hydro_47   2 fkhswegYkkyAwghDelrPlskkgrdtf.gglgatlvDsLdtllimglkeefeeaveavekkidfdtsdskevsvFEttIRyLGGLlsaydlse 95 
                     f++sw++Y++++wg+De+ P++k+gr+ + +g+g++++D+Ldt++imgl+++ e+a+e++++++++d+ d+ e++vFEttIR+LGGLlsa++ls 
      EPX72152.1  53 FQKSWSDYETFGWGYDEYYPIKKTGRNYLeKGIGWMIIDALDTMMIMGLDDQKERAREWIKSSLTWDQGDE-EMNVFETTIRMLGGLLSAHHLS- 145
                     9****************************99************************************7665.99********************. PP

                     S-HHHHHHHHHHHHHHHHGGGSSTTS---SEEETTT--EE-.STCGCEEEHHHHCSSHHHHHHHHHHHT-CHHHHHHHCCHHHHHCHCC.HHHTT CS
  Glyco_hydro_47  96 kkedvllekAveladrLlpAFdtpsglpvarvnlkkrkaskkerassesvlAelgslslEftrLsqlTgdkkYedlaervtkaleelqektklpg 190
                      k++++lekAv+l+drLl A++t++g+p a++nl++r+++k +++++  +++e g++++E+++Ls+lTgd++Y+d+a++vt++l +   + ++ g
      EPX72152.1 146 -KDPLYLEKAVDLGDRLLCAYNTTTGIPRANLNLQTRSSRK-RTRNYMVSTSECGTVQMELRYLSYLTGDRRYWDAADQVTTMLLNDP-SWSHIG 237
                     .*********************************8888555.555567889*********************************9955.4569** PP

                     B-BSEEETTT--EESTEE-SSTTTHHHHHHHHHHHHHCTS--HHHHHHHHHHHHHHHHH.TEEE-TTT..--EEE-EECTTCTS.EE-EEEGGGG CS
  Glyco_hydro_47 191 lvpikidastgkfvaekislgargDSyYEYllKqylllggeeeqyrkmyeealdaikkhllfrpskkkeddllfvgevtsteegklspeidhLsc 285
                     lvpi+++++tgk  + +i+lg+ gDSyYEYllKq l+l+++ ++yr+ y+ a+++i+khl+ r ++++  ++++++e++++ ++k +p++dhL+c
      EPX72152.1 238 LVPISFNLETGKYIGANIRLGSHGDSYYEYLLKQSLQLKDQVPIYREAYNIAVEGIMKHLVNR-TTHE--EYTYIAELPKGLNKKQHPKMDHLVC 329
                     ***********************************************************6666.6656..68*******9999************ PP

                     HHHHHHHHHHHTT-H..............HHHHHHHHHHHHHHHHHHHTSTTS---SEEEE-SS.....S-ECTSSSSEEE-.GGG--B----HH CS
  Glyco_hydro_47 286 FlgGllalgakllek..............eedlelAkkltegcvkayeatktglmPEifevkpcesaeecewneekkdealkriedrkyllRPEa 366
                     Fl+G+l+ ga++++               +e ++l ++l ++c+++y++t+tgl+PEi++++++++++e+  ne++++ ++   +dr++l+RPE+
      EPX72152.1 330 FLSGTLMWGATNGTSlnvarespqwsehqDEVVKLSEELCRTCYEMYRSTATGLAPEIVYFSTDTKTHEK-NNEKDSEMYTF-SQDRHNLMRPET 422
                     *************7779***********9999******************************87765555.44444445544.7*********** PP

                     HHHHHHHHHHH--THHHHHHHHHHHHHHHHCEE..TTEE--ECETTSS.S-EE-S-B-HHHHHTHHHHHHHHC-S-TT.T-TTTEEE-TTS-EEE CS
  Glyco_hydro_47 367 iESlfylYritgdekyrevgwemfealekatkt..esgysaledVtke.epekeDemeSFwlaEtlKYlYLlFsdedv.lsldeyVfnTeAHplk 457
                     +ESlf+lYritg+e yre+gw++f+a++k+++   + +++ l++V+++  ++++D+ eSFw+aEtlKYlYLlF+d+   l l+ey fnTeAHp++
      EPX72152.1 423 VESLFILYRITGKEIYREWGWNIFQAFMKHSRLpgRDAFTCLNNVETTgITNHKDRTESFWFAETLKYLYLLFEDDPSvLALTEYTFNTEAHPFP 517
                     *********************************7667*********9988899********************98755388*************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (526 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       744  (0.041497); expected 358.6 (0.02)
Passed bias filter:                      610  (0.0340231); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.29s 00:00:00.88 Elapsed: 00:00:00.45
# Mc/sec: 3490.15
//
Query:       EPX72153.1  [L=148]
Description: hypothetical protein SOCG_04846 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.23   11.3   6.4       0.63    9.9   6.4    1.9  1  DUF1168   Protein of unknown function (DUF1168)


Domain annotation for each model (and alignments):
>> DUF1168  Protein of unknown function (DUF1168)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   6.4   3.5e-05      0.63      35      73 ..      81     121 ..      39     131 .. 0.75

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 3.5e-05
     DUF1168  35 SgeFhvYrhlRrrEyeRlkliee..kskkeeedeefqqkle 73 
                 S   h+ +++Rr+ y+Rl+ +++  +++k e++++++++ e
  EPX72153.1  81 SKLHHIRKEQRRQRYQRLQWMQDyqEWDKSEDQDQWNSDNE 121
                 56679****************96226677777888877766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1437  (0.0801495); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.44
# Mc/sec: 1002.56
//
Query:       EPX72154.1  [L=239]
Description: 40S ribosomal protein S6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-57  193.3   0.0    2.5e-57  192.3   0.0    1.5  1  Ribosomal_S6e  Ribosomal protein S6e


Domain annotation for each model (and alignments):
>> Ribosomal_S6e  Ribosomal protein S6e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  192.3   0.0   1.4e-61   2.5e-57       1     125 []       1     126 [.       1     126 [. 1.00

  Alignments for each domain:
  == domain 1  score: 192.3 bits;  conditional E-value: 1.4e-61
                    -EEEEEETTTTEEEEEE-.CHHHCTTCTT-BSSEEEECCTTTSSSTS-EEEEEEEEETTC-BB-TTS-SSSEEEEEEETTSSSS-SSSSS-EEEEE CS
  Ribosomal_S6e   1 mklnisdpatgkqkliev.dekklrtligkrigeevdgdalGeelkgyvlkitggsdkqGfpmkqgvltpgrvrlLlskggvgyrprrkGerkrks 95 
                    mklnis+pa+g+qklie+ d+++lr +++kr+g+ev +d++G+e++gyv+kitgg+dkqGfpm qgvl p+rvrlLl+ g+++yrprr+Gerkrks
     EPX72154.1   1 MKLNISYPANGTQKLIEIdDDRRLRVFMDKRMGQEVPADSVGPEFAGYVFKITGGNDKQGFPMFQGVLLPHRVRLLLRAGHPCYRPRRDGERKRKS 96 
                    9*********************************************************************************************** PP

                    EE-SB--SSEEEEEEEEEE--SS--TTTSS CS
  Ribosomal_S6e  96 vrGcivsadisqlnlvivkkgekdiegltd 125
                    vrGciv++d+++l+++ivk+ge+di+gltd
     EPX72154.1  97 VRGCIVNQDMAVLAVAIVKQGEQDIPGLTD 126
                    *****************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       868  (0.0484132); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 1667.44
//
Query:       EPX72155.1  [L=334]
Description: hypothetical protein SOCG_04848 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.15   12.0   0.0        0.3   11.1   0.0    1.4  1  RL        RL domain


Domain annotation for each model (and alignments):
>> RL  RL domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   1.7e-05       0.3      15      42 ..     189     217 ..     177     226 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 1.7e-05
          RL  15 rsvLis.cpskisekkllkylsqhGkink 42 
                 +s+L++ +p+++s ++l+kyl ++G i+ 
  EPX72155.1 189 KSLLLQyVPNEVSSEDLYKYLRRQGPIDG 217
                 67777636999***************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (334 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       443  (0.0247086); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 2588.68
//
Query:       EPX72156.1  [L=129]
Description: DNA-directed RNA polymerase III complex subunit Rpc17 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.3e-23   81.2   3.1    8.5e-23   81.0   3.1    1.1  1  RNA_pol_Rpb4  RNA polymerase Rpb4
  ------ inclusion threshold ------
      0.035   14.1   0.0      0.052   13.5   0.0    1.3  1  UspB          Universal stress protein B (UspB)


Domain annotation for each model (and alignments):
>> RNA_pol_Rpb4  RNA polymerase Rpb4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.0   3.1   9.5e-27   8.5e-23       1     122 [.      10     127 ..      10     128 .. 0.91

  Alignments for each domain:
  == domain 1  score: 81.0 bits;  conditional E-value: 9.5e-27
                   EE-HHHHHHHHHHHHHHHHCHHHHHTCCCCCHHSHCHTCHHCHHHHHHHHHHHC.THHTTSSHHHHHHHHHHHTTSTSTHHHHHHHHHCSTSSHHHH CS
  RNA_pol_Rpb4   1 lLsnsEvllvlkeeleerknkdkkeseddkisekeevkgnlnkilkktleyltn.kfsrlkneekfnelvellksfeLtkaEklqlvnlkPesavel 96 
                   +L+n Ev+l+lk ++ee++n+ +    + + +    v++nl++i+ + l+y++  +++ + +eekf ++++ l ++eLtkaEkl ++n +P+s+ e+
    EPX72156.1  10 YLTNAEVYLHLK-DMEEEQNQRT----RVRGAAGGLVCENLRTIQFEILKYMNSqTNCSHMDEEKFLACLKVLDEYELTKAEKLIILNNRPSSIPEI 101
                   7***********.6666667754....234788999****************9647899999*********************************** PP

                   HHHSTTGTTTSTSHHHHHHHHHHHHH CS
  RNA_pol_Rpb4  97 ktlieeleerfedeqleeiLdelkev 122
                   +++ie +eer++++q+e+++++++ v
    EPX72156.1 102 YACIEGIEERLQEDQIEAFIEKVNSV 127
                   *********************99865 PP

>> UspB  Universal stress protein B (UspB)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   5.8e-06     0.052      57      95 ..      47      85 ..      31      93 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 5.8e-06
        UspB 57 skqvrllryiksreyldhhdpevilkcervrklfilssa 95
                + q  +l+y++s+   +h d+e  l c +v   + l++a
  EPX72156.1 47 TIQFEILKYMNSQTNCSHMDEEKFLACLKVLDEYELTKA 85
                568999*************************99999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       916  (0.0510904); expected 358.6 (0.02)
Passed bias filter:                      600  (0.0334653); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 975.72
//
Query:       EPX72157.1  [L=739]
Description: O-mannosyltransferase Ogm2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      3e-78  262.8  21.8      3e-78  262.8  21.8    2.2  2  PMT       Dolichyl-phosphate-mannose-protein mannosyltransfer
    1.6e-54  184.5  16.2    1.6e-54  184.5  16.2    2.5  2  PMT_4TMC  C-terminal four TMM region of protein-O-mannosyltra
    1.4e-17   64.1   0.0    2.6e-17   63.3   0.0    1.3  1  MIR       MIR domain


Domain annotation for each model (and alignments):
>> PMT  Dolichyl-phosphate-mannose-protein mannosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  262.8  21.8     5e-82     3e-78       2     244 ..      63     305 ..      62     306 .. 0.99
   2 ?    0.1   1.9      0.08   4.8e+02     186     240 ..     610     665 ..     604     668 .. 0.78

  Alignments for each domain:
  == domain 1  score: 262.8 bits;  conditional E-value: 5e-82
         PMT   2 iltllallirlwrlslpnsvvfdevhfgkfasdYlehsffmdvhpplgkmllalggyLagkdgnftfesigaeyypenvpyvslRlfsallgslivplv 100
                 +lt++a ++r w+++  + v++de+hfgkfas+Yl+h+f++dvhpplgkml a++g+L g+dg+f+f+s     ype+++y ++Rl++a++g+++ pl+
  EPX72157.1  63 VLTIIAGFVRTWHIADSPVVIWDEAHFGKFASYYLKHEFYFDVHPPLGKMLNAVAGKLVGYDGQFDFDSG--ATYPEGMNYKFMRLWNAVFGTFCIPLA 159
                 6899******************************************************************..599999********************* PP

         PMT 101 yltllelgfskltallaallvllenslitlsryilldspLlfftllsmyclvkfe..rkapfsrswwlwllltgvalglavsvKwvglftvllvgllli 197
                 y+ + + g+s ++a l  l+ +l+n l t+sr+illds+Llff+l ++++l +f+  rk+pfs  w++wl+ltgv++g+++svK vglf++++vgl+++
  EPX72157.1 160 YFSATNFGYSFWAATLVGLMIALDNHLATISRFILLDSMLLFFILSTFFSLSRFHvyRKQPFSFYWFKWLILTGVCIGCVCSVKLVGLFITAVVGLYTV 258
                 *************************************************************************************************** PP

         PMT 198 welwqllgdkslllksivkhllaralaliviPvtlylavftvhfwll 244
                  el++ll dk++++  +  h+l r+++li+iP+++y+++f++ f +l
  EPX72157.1 259 DELFRLLNDKKVSWTAYAGHWLTRIIFLIIIPFFIYALTFWIQFAVL 305
                 ********************************************987 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.08
         PMT 186 lftvllvgllliwelwqllg.dkslllksivkhllaralaliviPvtlylavftvh 240
                 +f++++vg++l w+   l++  k++ ++     + +   +++ +P ++   v +vh
  EPX72157.1 610 GFVLFVVGSVLSWRRHALQWnSKKFDMVHFAGVYPFLGWFMNYLPYYIMGRVLYVH 665
                 578889******99999999766677776666667777778888888888888887 PP

>> PMT_4TMC  C-terminal four TMM region of protein-O-mannosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.3   6.2         3   1.8e+04     154     173 ..     268     296 ..     157     310 .. 0.62
   2 !  184.5  16.2   2.7e-58   1.6e-54       1     199 []     538     735 ..     538     735 .. 0.94

  Alignments for each domain:
  == domain 1  score: -5.3 bits;  conditional E-value: 3
    PMT_4TMC 154 k.........klvklivvvvllvlviavF 173
                 k         +++++i++++++ + i++ 
  EPX72157.1 268 KkvswtayagHWLTRIIFLIIIPFFIYAL 296
                 12333433333344444444444444444 PP

  == domain 2  score: 184.5 bits;  conditional E-value: 2.7e-58
    PMT_4TMC   1 Flkkflelqkamltsnnalte.s...hpyaSepyeWplllrgisywtkneekkqiyllGNpvlwwlstiallvfvllllalllrrqrgvkdleeeetr. 94 
                 F+++f++l++aml+ nn+l++ +   + + S++y+Wp+ll  ++++++ +++ ++ l+GNp+ +w++t++l+ fvl+++  +l+++r+  ++++++   
  EPX72157.1 538 FWSDFFHLNRAMLRANNGLVPdEdklDALRSDAYQWPFLLATLRMCGWGDDQIKYLLIGNPFAYWFATASLFGFVLFVVGSVLSWRRHALQWNSKK-Fd 635
                 9********************5599***************************************************************99993333.34 PP

    PMT_4TMC  95 .llnsglflllgwalhylPfflmgRvlflhhYlpAllfailllaalldfllkslkkslkkkklvklivvvvllvlviavFiffspltyGlpgtseevkk 192
                  ++++g++++lgw+++ylP+++mgRvl++hhY p++ f+++++++++d++ ++l +      +++++v+++l+v+v+avFi+f+ +t+G++g+s+++++
  EPX72157.1 636 mVHFAGVYPFLGWFMNYLPYYIMGRVLYVHHYEPSYAFSAFIASFMVDWFARKLPH------AARITVYLLLYVVVTAVFIYFKDVTFGMHGPSSKFQH 728
                 79************************************************855554......4589********************************* PP

    PMT_4TMC 193 lkwlssW 199
                 l+wl+sW
  EPX72157.1 729 LRWLKSW 735
                 ******* PP

>> MIR  MIR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.3   0.0   4.3e-21   2.6e-17      11     181 ..     352     511 ..     351     515 .. 0.89

  Alignments for each domain:
  == domain 1  score: 63.3 bits;  conditional E-value: 4.3e-21
         MIR  11 LfHshqdeyltiseqqqkqevflritlypsadaanssraLWeievvqkdaw......rgglikwgkvyRlkHlaTgryLaseeekksplseseddqkev 103
                 L Hsh ++++ +s+qqq       +t y+++d +n+    W   +++   +          ik g+++Rl H  T r+L+ ++   +pl+++     ev
  EPX72157.1 352 LLHSHIQTFPGGSKQQQ-------VTGYHHKDGNNE----WMFLPEHGVHYdfeendPKIPIKEGSLVRLVHPYTNRNLHTHDI-PAPLNQR---MYEV 435
                 78***************.......************....*****999866223333455799*********************.9***966...99** PP

         MIR 104 sayglegfegdnDkveifekksttgmksaklvprdsyvrlqHvvtgcwLhstsvklkkekfekvqqkvicakekedke 181
                 s ygl  + +++D  ++    ++  ++ a++ + ++++ l   v +c+L+s++  l++++f+  q ++ c ++   k+
  EPX72157.1 436 SGYGLGDIGDEKDYWQVKIISDSAHKDIASVHSLSTVFQLYNPVMDCYLSSSTSSLPAWGFG--QIEMYCDPNTDAKN 511
                 ********9999*9555555688899999*********************************..******99988775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (739 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       744  (0.041497); expected 358.6 (0.02)
Passed bias filter:                      348  (0.0194099); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.26s 00:00:00.92 Elapsed: 00:00:00.44
# Mc/sec: 5004.21
//
Query:       EPX72158.1  [L=221]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       301  (0.0167884); expected 358.6 (0.02)
Passed bias filter:                      263  (0.014669); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 1549.88
//
Query:       EPX72159.1  [L=545]
Description: membrane transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.3e-31  107.8  43.6    4.8e-25   88.2  20.8    2.0  2  MFS_1        Major Facilitator Superfamily
    1.5e-19   70.2  15.5    6.2e-15   55.0   0.3    2.9  3  Sugar_tr     Sugar (and other) transporter
  ------ inclusion threshold ------
      0.092   13.0   0.2       0.17   12.2   0.2    1.5  1  ESP          Exocrine gland-secreting peptide
          2    8.5   4.4        1.9    8.5   0.5    2.7  2  Herpes_UL73  UL73 viral envelope glycoprotein


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.2  20.8   1.1e-28   4.8e-25       6     353 .]      77     504 ..      73     504 .. 0.84
   2 !   33.8  14.8   3.8e-12   1.7e-08      41     177 ..     406     541 ..     403     545 .] 0.85

  Alignments for each domain:
  == domain 1  score: 88.2 bits;  conditional E-value: 1.1e-28
       MFS_1   6 flsalarsi..lgpalplalaedlg.......ispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslwlllvlrvlq 95 
                 f+++++++    +p++++++ + l+        +p  + +l+ +  lg+++++ +++  sd fGr + +  ++l++++++l++  ++++ ++ ++  l 
  EPX72159.1  77 FIAGFGWMSdnSWPVVTSLILSRLNevngvhpPTPKDAPFLTLAQNLGFLAGASFWSISSDIFGRLWAFNYTFLITGVFSLVAGASPNFAAIGIFNSLW 175
                 4444444444499999987777777788888999999******************************************777774355558999999** PP

       MFS_1  96 GlgagalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslg...............Wravfyilaivsllafvlfllllpeepper 179
                 ++g g+ +p+  a++ +  p       + ++sa ++lG +l  l++  l+++++               Wr++ + +++++l++f++ +l+ ++e p  
  EPX72159.1 176 SFGVGGNLPVDSAIFIEAIPS-SYQWLLTVMSAWWALGQVLVNLIAWGLVANYScsddkepcykennkgWRYLLFTMGGLTLFMFLIRFLFPLVESPGY 273
                 ********************9.8888999*******************************************************997555556666666 PP

       MFS_1 180 krkspkeee...................................................kgtgpaplvp..........awkallkdpvlw...illi 214
                    +++e+e                                                   k        +          + + +++++ ++   +++ 
  EPX72159.1 274 LLAKGREQEavqavhkiakynkkesslslqdfqkvqpslsntlesqtendvlhtinnspkK--------EalkrvinfqtIRECFRSKRLILsstLVIS 364
                 6666666669999999999999999*********999999999999999998777644430........233345667744455555555557778999 PP

       MFS_1 215 alllfffgfsglltllplylqevlgls...glllaglllallalvgailallagrls.drlgrrrrlllallllllaalglallavtssavllllvlvl 309
                 +++l++++f ++ ++lp yl ++ + +   ++++++  + +++ +g++++llag l+  r+gr+ +l+l+lll+ +++++   + ++ +a l++     
  EPX72159.1 365 SWALIGLAFPLYNAFLPYYLESRGNANkplSVYETYRNSLIVSTLGVPGSLLAGILVeLRIGRKGTLTLSLLLTGVFLFASTTAKTS-NAYLGWN--CA 460
                 99999999999********55555555***999999999******************999***998888888888888888888888.4444443..34 PP

       MFS_1 310 iGfglgfvfpsllalasdlappeeagtasglfntagslggalgp 353
                 ++f + ++++ l a++ +++p + +gta+gl+++a+ + g+++p
  EPX72159.1 461 FTFVSDIMYGVLYAYTPEVFPSKVRGTAIGLASSANRVLGVFAP 504
                 457999**********************************9998 PP

  == domain 2  score: 33.8 bits;  conditional E-value: 3.8e-12
       MFS_1  41 yalgaavaslplGrlsdr.fGrrrvlllglllfalglllll.fasslwlllvlrvlqGlgagalfpagaaliadwfpkeergraigllsagfslGailg 137
                 ++ + + +sl++G l++  +Gr+ +l l+lll++++ l+++  a ++ + l   +   + + +++ + +a++ ++fp + rg aigl+s+++ +  +++
  EPX72159.1 406 VSTLGVPGSLLAGILVELrIGRKGTLTLSLLLTGVF-LFAStTAKTSNAYLGWNCAFTFVSDIMYGVLYAYTPEVFPSKVRGTAIGLASSANRVLGVFA 503
                 55667889*********66*****************.66662335555999999*99****************************************** PP

       MFS_1 138 pllggllasslgWravfyilaivsllafvlfllllpeepp 177
                 p+++ +    l  +a+ ++ ++++l+a++l +++ +e++ 
  EPX72159.1 504 PIIAMYAN--LTTSAPIFVSGALFLFAGLLTIFFPYEPRG 541
                 ***87776..9999*************9985555555444 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.0   0.3   1.4e-18   6.2e-15      51     234 ..     117     315 ..      71     344 .. 0.86
   2 !    6.3   1.0   0.00082       3.7       7     101 ..     357     453 ..     355     471 .. 0.78
   3 !   16.1   9.0   8.6e-07    0.0039     295     435 ..     405     535 ..     403     542 .. 0.63

  Alignments for each domain:
  == domain 1  score: 55.0 bits;  conditional E-value: 1.4e-18
                 HHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHH CS
    Sugar_tr  51 ivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitf 149
                 ++ + ++G ++G+ f ++ +d+fGR +++  + +++ + +++ +a++   ++ ++ +   l  +gvG+   + +    E  p ++   l ++   ++++
  EPX72159.1 117 LTLAQNLGFLAGASFWSISSDIFGRLWAFNYTFLITGVFSLVAGASP---NFAAIGIFNSLWSFGVGGNLPVDSAIFIEAIPSSYQW-LLTVMSAWWAL 211
                 5667799****************************************...*****************************99999865.55666789*** PP

                 HHHHHHHHHHHH.HTSS-...........TTHHHHHHHCCHHHHHHHHHHGGGS-..--HHHHHHTT-HHHHHHHHHHHHHC.....HHHHHHHHHHHH CS
    Sugar_tr 150 Gilvaaifglgl.nktsn...........adgwrillglqlvpallllilllflP..ESPrylvekgkeeeakevlaklrge.....edadrelaeekd 229
                 G+++   + +gl +++s            ++gwr+ll+    ++l+++++++++P  ESP yl+ kg+e+ea + + k+ +      ++  +++++ + 
  EPX72159.1 212 GQVLVNLIAWGLvANYSCsddkepcykenNKGWRYLLFTMGGLTLFMFLIRFLFPlvESPGYLLAKGREQEAVQAVHKIAKYnkkesSLSLQDFQKVQP 310
                 ************77766689*******************************9999889**************999999554422234444555555555 PP

                 HHHHH CS
    Sugar_tr 230 sleae 234
                 sl  +
  EPX72159.1 311 SLSNT 315
                 55554 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.00082
                 HHHHHHHHHHHCGGGTHHHHHHHHTSTT--SHHHHHH.......HHHHHHHTHHHHHHHHHHHHHHHHH.HTTHHHHHHHHHHHHHHHHHHHH-TTTTS CS
    Sugar_tr   7 lggllfgYdtgvigafltllkfaknfglsksksskee....ssvlsglivsiflvGaiiGslfagllgd.rfGRkkslliaavlfvigavlqaaakgkn 100
                 l+++l     ++ig +  l++++  ++l+++ ++++      + +      i++  ++ Gsl+ag+l++ r+GRk +l  + +l+ +  + + +ak  n
  EPX72159.1 357 LSSTLVISSWALIGLAFPLYNAFLPYYLESRGNANKPlsvyETYRN---SLIVSTLGVPGSLLAGILVElRIGRKGTLTLSLLLTGVFLFASTTAKTSN 452
                 6778889999999999999999999999998888887533333333...4455556788*******99868*************999999999999654 PP

                 S CS
    Sugar_tr 101 s 101
                 +
  EPX72159.1 453 A 453
                 3 PP

  == domain 3  score: 16.1 bits;  conditional E-value: 8.6e-07
                 HHHHHHHHHHHHH.HHHHHHS-SHHHHHHHHHHHHHHHHHHH..HHHHTTSS...CHHHHHHHHHHHHHHHTTTTHHHHHHHHHHSHTTTHHHHHHHHH CS
    Sugar_tr 295 ivgvvnfvatfva.iflvdrfGRRtllllGaagmaicfvilgivalllvakskaasivaivfialfialfalgwgpvpwvlvsElfpqsvRskalaiav 392
                 iv+++ +  ++ a i++  r+GR+ +l l+++   ++++  +  ++ +       s++ +   + f+++  +   +v++ + +E+fp++vR++a+ +a 
  EPX72159.1 405 IVSTLGVPGSLLAgILVELRIGRKGTLTLSLLLTGVFLFAST--TAKT-------SNAYLGWNCAFTFVSDIMY-GVLYAYTPEVFPSKVRGTAIGLAS 493
                 555555555666625555589999777777665444433332..2222.......3344444444444444333.3788999***************** PP

                 HHHHHHHHHHHHHHHHHHCHHHT-HHHHHHHHHHHHHHHHHHH CS
    Sugar_tr 393 avnwlanflisllfpiiteaigggyvflvfaglavlfiifvff 435
                  +n +  ++  ++ +++  + + +++f+  a ++ ++++ +ff
  EPX72159.1 494 SANRVLGVFAPIIAMYANLTTS-APIFVSGALFLFAGLLTIFF 535
                 ********99999999888887.55554444444444444433 PP

>> ESP  Exocrine gland-secreting peptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.2   3.8e-05      0.17       2      77 ..     256     333 ..     255     349 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 3.8e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXX---TTHHHHHHTTHHHHSSSTHHHHHHHHTT-TT CS
         ESP   2 lmlFliiLllpsmltEGrvLtqTqkestisAdhk....tnfkivldkidcqnireaiekvlcasdqdktlledfananqq 77 
                 l +Fli  l+p + + G  L +  ++  + A hk    + ++++l   d+q+++ ++ ++l  + ++++l    +n+  +
  EPX72159.1 256 LFMFLIRFLFPLVESPGYLLAKGREQEAVQAVHKiakyNKKESSLSLQDFQKVQPSLSNTLESQTENDVLHT--INNSPK 333
                 679*****************************985543456899**********999999988877777655..444433 PP

>> Herpes_UL73  UL73 viral envelope glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.5   0.00043       1.9      33      65 ..     197     229 ..     194     232 .. 0.92
   2 ?   -0.2   0.2      0.22   9.9e+02      57      74 ..     451     468 ..     434     469 .. 0.73

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00043
  Herpes_UL73  33 tyslslsSFssiwallnvlvvivalliylrylC 65 
                  +y+  l+  s++wal  vlv ++a  ++  y C
   EPX72159.1 197 SYQWLLTVMSAWWALGQVLVNLIAWGLVANYSC 229
                  688889999***********************9 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.22
  Herpes_UL73  57 lliylrylCfkkFvatlv 74 
                  + +yl + C  +Fv++++
   EPX72159.1 451 SNAYLGWNCAFTFVSDIM 468
                  35799999******9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (545 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       655  (0.036533); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.64u 0.25s 00:00:00.89 Elapsed: 00:00:00.43
# Mc/sec: 3794.20
//
Query:       EPX72160.1  [L=2119]
Description: glutamate synthase Glt1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.8e-180  600.2   0.0   2.4e-180  599.8   0.0    1.2  1  GATase_2         Glutamine amidotransferases class-II
   1.3e-157  524.7   0.2   1.5e-156  521.2   0.1    2.1  2  Glu_synthase     Conserved region in glutamate synthase
   4.6e-114  380.6   0.0   1.2e-111  372.7   0.0    2.3  2  Glu_syn_central  Glutamate synthase central domain
    5.5e-86  287.0   4.0      1e-85  286.1   4.0    1.5  1  GXGXG            GXGXG motif
    9.2e-26   90.7   0.0    2.8e-25   89.1   0.0    1.8  1  Pyr_redox_2      Pyridine nucleotide-disulphide oxidoreductas
    1.9e-21   75.9   0.0    4.3e-21   74.8   0.0    1.6  1  Fer4_20          Dihydroprymidine dehydrogenase domain II, 4F
    1.2e-07   31.9   0.0    3.8e-07   30.2   0.0    1.9  1  NAD_binding_8    NAD(P)-binding Rossmann-like domain
    7.6e-07   29.0   0.5     0.0099   15.5   0.2    2.6  2  DAO              FAD dependent oxidoreductase
    3.4e-06   26.6   1.3      0.041   13.1   0.1    3.6  3  Pyr_redox_3      Pyridine nucleotide-disulphide oxidoreductas
      5e-06   26.1   0.1    9.2e-06   25.2   0.1    1.4  1  Amino_oxidase    Flavin containing amine oxidoreductase
    7.7e-05   22.0   0.1    0.00032   19.9   0.2    2.0  2  FAD_binding_2    FAD binding domain
    8.3e-05   22.1   0.1    0.00019   20.9   0.1    1.6  1  FAD_oxidored     FAD dependent oxidoreductase
     0.0001   21.1   1.0    0.00015   20.6   0.0    1.7  2  HI0933_like      HI0933-like protein
    0.00014   22.3   1.1     0.0044   17.6   0.1    2.9  2  Pyr_redox        Pyridine nucleotide-disulphide oxidoreductas
     0.0003   20.1   1.0     0.0028   17.0   0.0    2.7  3  Thi4             Thi4 family
     0.0016   17.8   0.1     0.0029   16.9   0.1    1.4  1  FAD_binding_3    FAD binding domain
     0.0081   15.2   2.2       0.02   13.9   2.2    1.6  1  FMN_dh           FMN-dependent dehydrogenase
  ------ inclusion threshold ------
      0.011   15.1   0.1      0.037   13.4   0.0    1.9  1  2-Hacid_dh_C     D-isomer specific 2-hydroxyacid dehydrogenas
       0.02   14.5   0.0       0.13   11.8   0.1    2.2  2  IlvN             Acetohydroxy acid isomeroreductase, NADPH-bi
      0.065   13.7   0.4        4.2    7.8   0.0    2.8  2  NAD_binding_7    Putative NAD(P)-binding
       0.14   11.2   0.1       0.38    9.8   0.1    1.7  1  Lycopene_cycl    Lycopene cyclase protein
       0.15   11.1   3.8        0.1   11.7   0.3    2.3  2  GIDA             Glucose inhibited division protein A
        0.2   10.1   0.0        1.9    6.8   0.0    2.3  3  FMO-like         Flavin-binding monooxygenase-like
       0.22   10.8   0.9        1.1    8.5   0.1    2.1  2  AlaDh_PNT_C      Alanine dehydrogenase/PNT, C-terminal domain


Domain annotation for each model (and alignments):
>> GATase_2  Glutamine amidotransferases class-II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  599.8   0.0  3.2e-183  2.4e-180       1     420 []      74     498 ..      74     498 .. 0.98

  Alignments for each domain:
  == domain 1  score: 599.8 bits;  conditional E-value: 3.2e-183
                 -EEEEEE-SSS--BSHHHHHHHHHHHHGGGGS-B-TTSSSBSEEEEEEE--HHHHHHHHHH.TT-----GGG-EEEEEEE-SSHHHHHHHHHHHHHHHH CS
    GATase_2   1 CGvgfiaelkgkkshkivekalealenleHRGavgadektGDGaGillqiPdeflrkeake.kgielpeageyavgmlflpkdeekaeeakkileeive 98 
                 CGvgf++++kg+ +hkiv++a  +l+n++HRGa+gad+++GDGaG+++++P +f++ke+k+  g++lp+ g+ya+g++f++ ++e ++e  + ++++++
  EPX72160.1  74 CGVGFVCHVKGQGNHKIVTDARLLLCNMTHRGATGADTRDGDGAGVMTSMPYAFMQKEFKQiLGYDLPQPGQYATGNVFFSPEPEVCQEGIDSFTNVAN 172
                 ************************************************************999************************************ PP

                 HTT-EEEEEEE--B-GGGS-HHHHHH--EEEEEEEE-TT-......--HHHHHHHHHHHHHHHGGG.....-BTTBEEEEEESSEEEEEESS-GGGHHH CS
    GATase_2  99 eeglevlgwRevpvdksvlgeaakesePsieqvfvekked......lseeelerklyviRkriekeiakkkaekefYicslssrtivYkglltseqlke 191
                 + +levlgwR+vp+d+s+lg aa+++eP+i q ++ +k        ++e+ +e++ly++Rk++  +i    +ek+fYicsls+ tivYkg+l++ q+ +
  EPX72160.1 173 ALELEVLGWRSVPCDNSILGPAALSREPTILQPIIVHKPVyeglseFDENLFEKQLYLLRKQSAIQIG---KEKWFYICSLSRDTIVYKGQLAPVQVYN 268
                 ********************************99966654445555999**************99998...89************************** PP

                 HBHGGGSTT--BSEEEEEE---SSSS--GGGSSS-SSEEEEE--TTHHHHHHHHHHHCTT--BT-HH.HHHTC--S--TTS-HHHHHHHHHHHHHHTT. CS
    GATase_2 192 fykdlkdeelesalalvHsRfstntfPsWelaqPlRllaHnGEintlrGnknwmkareaelksellgdelekllPivneegsDsasldnvlellvlsg. 289
                 ++ dl+++e+++++alvHsRfstntfPsW++aqP+Rl aHnGEintlrGnknwm+are  lks+ +gd+l++llP+++++gsDsa++dnvlell+ +g 
  EPX72160.1 269 YFLDLNNAEYTAHFALVHSRFSTNTFPSWDRAQPMRLAAHNGEINTLRGNKNWMRAREGLLKSSKFGDQLSSLLPVIERGGSDSAAFDNVLELLCVNGt 367
                 *************************************************************************************************98 PP

                 --HHHHHHHHS----TT-GGGTHHHHHHHHHHTTT-----SSEEEEEE-SSEEEEEE-TT--S--EEEEETT--EEEESSTTSS---GGGEEEEEE--T CS
    GATase_2 290 rslaealmlliPeawennksldkekkafyeyasalmepWDGPalivftdGkvvgavLDRnGLRPaRylvtkddlvvlasEvGvldleeeevvekgrlqP 388
                 +sl+ea+m+liPeaw+n++sl++ek+afye+a+++mepWDGPal++f+dG+++ga+LDRnGLRP+Ry++t+dd++++asEvG++ +e+e+vv+kgrl P
  EPX72160.1 368 VSLPEAIMMLIPEAWQNDNSLTDEKAAFYEWAACQMEPWDGPALFIFADGRYCGANLDRNGLRPCRYYLTSDDMMICASEVGTVGIEPEKVVQKGRLCP 466
                 8************************************************************************************************** PP

                 T-EEEEETTTTEEEEHHHHHHHHHTTS-HHHH CS
    GATase_2 389 Grmllvdleegriledeeikkkiaskkpykew 420
                 Grmllvd++egri++d+e+k++ia+++++++w
  EPX72160.1 467 GRMLLVDTKEGRIVDDKELKHNIANRYDFRSW 498
                 ******************************99 PP

>> Glu_synthase  Conserved region in glutamate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.23   1.7e+02     256     306 ..     710     763 ..     701     772 .. 0.74
   2 !  521.2   0.1    2e-159  1.5e-156       1     368 []     882    1252 ..     882    1252 .. 0.99

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.23
                   HHHHHHHHHHHHHTT-GGG-EEEE.ESS--SHHHHHHHHHHT-SEE..E-SHHH CS
  Glu_synthase 256 elalaevdqtlkeeglrdrvslia.dGglktgadvvkalalGAdav..gigtaa 306
                   ++a  +v++ l++ +lr+r+ li  +G+ +  +   + l  GAdav  +++  a
    EPX72160.1 710 VAACGAVHHFLVHRKLRSRIALICeSGDAREVHHACILLGYGADAVcpYLAMEA 763
                   567889***************997257666666666666668998844455555 PP

  == domain 2  score: 521.2 bits;  conditional E-value: 2e-159
                    -SS-HHHHHHHHHHHHH---HHHHHHHHHHHTS.-S-SGGGGEEE--SS--.--GGGS--HHHHHTTEE---B-TTTS-HHHHHHHHHHHHHHT- CS
  Glu_synthase    1 krneievikllqkavqveskesidkyrekleerevlkakrdlleldaaeealikleevepalkikkriltsamSyGalseeahealakamnrlgt 95  
                    + n++++ ++lq+av++++++++ +++++  e+++ +++r +l++d + +++i++e+vep+++i++r++t+amSyG++s+e+h++la+amnr+g+
    EPX72160.1  882 HVNHPKAVASLQEAVRNQNESAYAEFAKTHYEQTRKCTLRGMLDFDVDPSQSIPIEQVEPWTEIVRRFCTGAMSYGSISMESHSTLAIAMNRIGG 976 
                    67899999*************************************************************************************** PP

                    B-EETTS---GGGGS-----.....SEEEE-TT-TT--HHHHHH-SEEEEE---TTSTTS--EE-GGG--HHHHHHHTS-TT--EE--SS-TT-S CS
  Glu_synthase   96 ksntGEGGedeerlktakdv.....aikQvasgrFGvteeyLnnakaleikiaQGakpgeGgqlpgeKvseeiakiRkikpgvdliSPaphhdiy 185 
                    ksntGEGGed++r +  ++      aikQ+asgrFGvt++yL+++++l+ik+aQGakpgeGg+lpg+Kvse+iak+R+++ gv+liSP+phhdiy
    EPX72160.1  977 KSNTGEGGEDPARSQRLTNGdtmrsAIKQIASGRFGVTSYYLSDSDELQIKMAQGAKPGEGGELPGNKVSESIAKTRHSTAGVGLISPPPHHDIY 1071
                    ***************99999999************************************************************************ PP

                    SHHHHHHHHHHHHHH-TTSEEEEEEE-STTHHHHHHHHHHTT-SEEEEE-TT---SSEEHHHHHHB---HHHHHHHHHHHHHHTT-GGG-EEEEE CS
  Glu_synthase  186 siedlaqliedLkevnkeakvsvKlvaeagvetiaagvakanadiilidGleGGTGAspkssikhaGlPlelalaevdqtlkeeglrdrvsliad 280 
                    siedl+qli+dLk++n++a+vsvKlv+e gv+++a+gvaka+ad+i+++G++GGTGAs+++ ik+aGlP+el++ae++qtl+ ++lr rv++++d
    EPX72160.1 1072 SIEDLKQLIYDLKCANPRARVSVKLVSEVGVGIVASGVAKAKADHIVVSGHDGGTGASRWTGIKYAGLPWELGVAETHQTLVLNDLRGRVVIQTD 1166
                    *********************************************************************************************** PP

                    SS--SHHHHHHHHHHT-SEEE-SHHHHHHTT--S---GGGT--TTSSS---HHHH..TT----HHHHHHHHHHHHHHHHHHHHHHT-S CS
  Glu_synthase  281 GglktgadvvkalalGAdavgigtaalialgCimarvChtntCpvGvatqdpeLrkrlkveekaervvnyikalaeevrellaalgin 368 
                    G++ktg+dv++a +lGA+++g++t++lialgCim+r+Ch+ntCpvG+atqdpeLr  +k+e+++e+vvn+++++aee+r ++a+lg++
    EPX72160.1 1167 GQIKTGRDVAIACLLGAEEWGFATTPLIALGCIMMRKCHLNTCPVGIATQDPELR--KKFEGQPEHVVNFFYYVAEELRGIMAKLGFR 1252
                    *******************************************************..9****************************85 PP

>> Glu_syn_central  Glutamate synthase central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  372.7   0.0  1.6e-114  1.2e-111       2     279 .]     535     821 ..     534     821 .. 0.96
   2 ?    5.6   0.0     0.013       9.4     165     265 ..    1135    1255 ..    1105    1260 .. 0.74

  Alignments for each domain:
  == domain 1  score: 372.7 bits;  conditional E-value: 1.6e-114
                      HHHHTT--HHHHHHTHHHHHHHSS--EE-S---S--TTT-SS---GGGGEEE----SSS----TTTTGGG-B--EEES----SSS--GGGG-EE CS
  Glu_syn_central   2 rqkafgyteedlelllepmakegkeaigsmGdDtplavLsekprllydYFkqlfAqVTNPpiDpiREelvmsletllGkegnlleeeeeqakrl 95 
                      ++ afgy+ e+++++++pma++gke++gsmG+D+++a+Ls++prlly+YF++lfAqVTNPpiDpiRE++vmsl++++G++gnlle +++q++rl
       EPX72160.1 535 QLLAFGYNLEQINMVIAPMANDGKETLGSMGNDAAIACLSSEPRLLYEYFRELFAQVTNPPIDPIREAIVMSLQCYIGPSGNLLEIDPSQCRRL 628
                      5679****************************************************************************************** PP

                      EESSSB--HHHHHHH.....HHSSS-EEEEESEE.......SHHHHHHHHHHHHHHHHHTT-SEEEEESS--STTEEE--HHHHHHHHHHHHHH CS
  Glu_syn_central  96 klesPiLteeeleklkkl.kekkefkaktlditfeae....aleealerlceeaeeavregaeilvLsDrkvseervpipslLavgavhhhLvr 184
                      +l +PiLt eel+++k++   ++++k++ +ditf ++    ++++al+r+c+++ +a++++++i++LsDr++++ervp++s+ a+gavhh Lv+
       EPX72160.1 629 RLPTPILTLEELNAMKNVtYLHPDWKVASVDITFGKSegprGYSAALDRICARVVDAIENDYKIVILSDRDANSERVPLSSVAACGAVHHFLVH 722
                      ****************99755789**********77766555**************************************************** PP

                      TT-GGG-EEEEEESS--SHHHHHHHHHTT-SEEEEHHHHHHHHHHHTTTS-....----HHHHHHHHHHHHHHHHHHHTT--BHHHHHHS--EE CS
  Glu_syn_central 185 kglrtkvslvvesgearevhhfavllgyGadavnPylaletieklveegal....aeeeleknyrkavekGllKimskmGistlqSYkgaqife 274
                      ++lr++++l++esg+arevhh+++llgyGadav+Pyla+e+i kl++++al    +e+++ +ny++a++ G+lK+mskmGistlqSYkgaqife
       EPX72160.1 723 RKLRSRIALICESGDAREVHHACILLGYGADAVCPYLAMEAIIKLQRQNALkpgvTEAKAIENYKHAMNGGILKVMSKMGISTLQSYKGAQIFE 816
                      **********************************************999887777777777********************************* PP

                      ESSB- CS
  Glu_syn_central 275 avGls 279
                      a+G++
       EPX72160.1 817 ALGID 821
                      ***95 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.013
                       TEEE--HHHHHHHHHHHHHHTT-GGG-EEEEEESS--SHHHHHHHHHTT-S....EEEEHHHHHHHHHHHTTT.........S-........ CS
  Glu_syn_central  165 ervpipslLavgavhhhLvrkglrtkvslvvesgearevhhfavllgyGad....avnPylaletieklveeg.........al........ 235 
                       + + +p  L v+  h++Lv ++lr +v  +   g++++  ++a+ + +Ga+    a +P +al +i  ++++          a+        
       EPX72160.1 1135 KYAGLPWELGVAETHQTLVLNDLRGRVV-IQTDGQIKTGRDVAIACLLGAEewgfATTPLIALGCI--MMRKChlntcpvgiATqdpelrkk 1223
                       5667888999***************995.45669***************987777899******99..444443444444440044444444 PP

                       ..----HHHHHHHHHHHHHHHHHHHTT--BHH CS
  Glu_syn_central  236 ..aeeeleknyrkavekGllKimskmGistlq 265 
                          + e+  n+   v + l  im+k+G  t++
       EPX72160.1 1224 feGQPEHVVNFFYYVAEELRGIMAKLGFRTIN 1255
                       332333349999999999*******9999885 PP

>> GXGXG  GXGXG motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  286.1   4.0   1.4e-88     1e-85       2     188 ..    1332    1518 ..    1331    1520 .. 0.99

  Alignments for each domain:
  == domain 1  score: 286.1 bits;  conditional E-value: 1.4e-88
                  EE-TT--STTHHHHHHHHHHHTTT---.-EEEEEEEEEE-TTTTTT--TTEEEEEEEEE-STTTTT-ESSEEEEE--TT-SS-GGGSB-S-SSTTTT CS
       GXGXG    2 eirnldrsvgtilsneiakrygeeglpedtikiklkGsaGqslgaflakGltleleGdandyvGkglsgGkivikpskeskfkaeeniivGnvvlyg 98  
                  ei n+dr++g++lsn+i+krygeeglp d+i +k+ GsaGqs+gafla G+tl+leGd+ndyvGkglsgG+++i p+k+s+fk+een+ivGnv+lyg
  EPX72160.1 1332 EIINTDRTLGATLSNRISKRYGEEGLPADSICVKVFGSAGQSFGAFLAPGVTLQLEGDCNDYVGKGLSGGRLIILPPKASSFKPEENVIVGNVCLYG 1428
                  799********************************************************************************************** PP

                  --SEEEEESSB--SSTTTT-SS-EEEESEB-SSTTTT-EEEEEEE-S-B-SSBTTT--EEEEEEE-SSSTHHHHB-TTT-EEEES-SHHH CS
       GXGXG   99 atgGklfirgkageRfavrnsgatavvegvgdhgceYmtGGvvvvLgktgrnfaaGmsgGiayvldedekfekklnkelvelekvedeee 188 
                  at+G++fi+g a+eRfavrnsg++ vvegvgdhgceYmtGG+vv+Lg+tgrnfaaGmsgGiayv+d++++f+kk+n+e+vel++v+d++e
  EPX72160.1 1429 ATSGQVFISGVAAERFAVRNSGVVTVVEGVGDHGCEYMTGGRVVILGNTGRNFAAGMSGGIAYVYDNHTDFSKKVNMEMVELTTVSDAAE 1518
                  *************************************************************************************99877 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.1   0.0   3.8e-28   2.8e-25       1     288 [.    1764    2083 ..    1764    2089 .. 0.69

  Alignments for each domain:
  == domain 1  score: 89.1 bits;  conditional E-value: 3.8e-28
                   CSEEEE--SHHHHHHHHHHHHHTS-EEEEETTHCHHHCSHHHHCHHHHHHHHHHHHHHHHHCHHHHCCCCHCCTCEEEEESCEEEEETEEECTCEE CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2    1 kdvvviGgGpAGlaaaltlaqagakvtlvelegtclnggcllskallgvaedaeiasevvkklnqgielllgeevvkidpgkkkvklekkkegdee 96  
                   k+v+viG+GpAGlaaa +l++ag++v+++ ++   ++g  ll++ + +++ d+ ++ +        i+l+ + e+v+i   + ++   + ++ +e 
   EPX72160.1 1764 KRVAVIGSGPAGLAAADQLNHAGHNVVIY-ERADRPGG--LLQYGIPNMKLDKFVVDRR-------IQLMVD-EGVEIM-TNVEIGSPHGVSLEEL 1847
                   58***************************.66666666..8888888888888766643.......555555.555553.2225555555555666 PP

                   EEEESEEEE---E.EE-BCTCTTC..TTBEECCSECHHHHH.HCCSS-T..........SEEEEES-SHHHHHHHHHHHHHT-............. CS
                   xxxxxxxxxxxxx.xxxxxxxxxx.xxxxxxxxxxxxxxxx.xxxxxxx..........xxxxxxxxxxxxxxxxxxxxxxxx............. RF
  Pyr_redox_2   97 kiaydklvlAtGs.sprdlgipGv.aenvgklvrtldsaea.lklkllp..........krivvvGgGyiGvElAaalaklgk............. 166 
                   + +yd++vlAtGs  prdl ip   a++ ++ ++ l++  + l + +            k+++v+GgG +G ++ ++  + g+             
   EPX72160.1 1848 QSTYDAVVLATGStIPRDLAIPNRdAKGIHFAMEFLHKNTKsLLDSK-LedgeyisakgKDVIVIGGGDTGNDCLGTSVRHGAksirnlellpipp 1942
                   78**********967*******8843333333333333222022333.2467777777788****************9999887788888888888 PP

                   .............EEEEEESSSSSS.TTS-HHHHH..HHHHHHHHT...TEEEEESCEEEEEEETTE...EEEEEETTSCEEEESEEEE-S-EEES CS
                   .............xxxxxxxxxxxx.xxxxxxxxx..xxxxxxxxx...xxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2  167 .............evtlveardrll.raldkelsa..aleealeke...Gvevklgtsvkeidgnge...klevvledgeeidadlvvvavGvrps 240 
                                +v  v+ +   +   +++++++  +l++ +ek+   +v+  +  ++ e ++n++    ++ v +++e ++adlv++a G+   
   EPX72160.1 1943 rerafdnpwpqypRVFRVDYGHAEVqAHYGQDFREysILTKNFEKDddgNVTGIHTVRI-EWTKNSKgrwIMKEVRNSEEFFPADLVILALGFLGP 2037
                   88888888888885555555444444667777776225788888874333443333333.445555443322344444444***********9877 PP

                   -HHCSHCCT-EEEETTEEE--TTS.BESSTTEEE-GGGCTECCSS--HH CS
                   xxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2  241 telleeklglelderggivvdefl.rtnvpgiyaiGDvaggkggpelaq 288 
                    e ++ ++ +  d r  i + +++ +t+vp++ya+GD+    +g  l++
   EPX72160.1 2038 EEQATASMDIRRDARSNISTPHKSyQTSVPNVYACGDCR---RGQSLVV 2083
                   77766*************7777766*************9...5555555 PP

>> Fer4_20  Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.8   0.0   5.8e-24   4.3e-21       2     112 ..    1642    1751 ..    1641    1752 .. 0.95

  Alignments for each domain:
  == domain 1  score: 74.8 bits;  conditional E-value: 5.8e-24
                  TTS-S-SB----HHHHHHHHTT----TT-HHHH..CSTT---HHHHHHHHHTT-HHHHHHHHHHH-S-HHHHHHHS-GGGTGCCS-GGGTTB.---- CS
     Fer4_20    2 aknfkevalglteeealeeAsRClqCkkapcvk..gCPveidipefikkiaegnleeaakiiketnslpavcgrvCpqeelCegaCvlekkgkepva 96  
                  ++++ke++ +l+e+e   + +RC++C ++ c++  gCPv+++i ++ + + +++++ea+  +  tn++p+ +grvCp    Ceg+Cvl+  + +pv 
  EPX72160.1 1642 TNDWKELSVRLKEDELRLQTARCMDCGTPFCQSdyGCPVSNKIFTWNDLVFKKQWKEALVQLLMTNNFPEFTGRVCPAP--CEGSCVLGIIE-SPVG 1735
                  6789***************************98679*****************************************99..*******9777.9*** PP

                  HHHHHHHHHHHHHHT- CS
     Fer4_20   97 igklerfvadaareeg 112 
                  i+++er ++d+a eeg
  EPX72160.1 1736 IKSVERAIIDKAWEEG 1751
                  ***********99986 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   0.0   5.1e-10   3.8e-07       1      36 [.    1768    1803 ..    1768    1827 .. 0.85

  Alignments for each domain:
  == domain 1  score: 30.2 bits;  conditional E-value: 5.1e-10
                     EE--SHHHHHHHHHHHCCTEEEEEE-SSSSSSGGG- CS
  NAD_binding_8    1 IvGaGlsGlvaAylLakagfdvlllekrdrlGGraa 36  
                     ++G+G +Gl+aA  L  ag++v+++e++dr+GG ++
     EPX72160.1 1768 VIGSGPAGLAAADQLNHAGHNVVIYERADRPGGLLQ 1803
                     8********************************765 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.2   1.3e-05    0.0099       1      33 [.    1765    1799 ..    1765    1801 .. 0.92
   2 !   11.0   0.0    0.0003      0.22     155     271 ..    1822    1919 ..    1815    1977 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.3e-05
                  EEEEECTSHHHHHHHHHHHHTT..EEEEESSSSTT CS
         DAO    1 dvviiGGGiiGlstAyeLarrg..Vtllekgdiag 33  
                  +v++iG+G +Gl++A +L  +g  V+++e++d++g
  EPX72160.1 1765 RVAVIGSGPAGLAAADQLNHAGhnVVIYERADRPG 1799
                  59****************777889*******9999 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.0003
                  HHHHTT-EEEESECEEE.EEEEETCEEEEEEECTEEEEEEEEEEE--GGGHHHHHTTCTTTSEEEEEEEEEEEEEECCTHSTGSGCSEEEEEEEETT CS
         DAO  155 aaealGveilegtevtg.leeedgkvwgverttpgendaadavVnaaGawsdllgllkeldlpispvrgqvlvlkplseklvspaailpvpetdddg 250 
                   + + Gvei ++ e+ + +      ++ +   + + ++++davV+a+G         ++l +p + ++g +++++ l+++         ++  +  +
  EPX72160.1 1822 LMVDEGVEIMTNVEIGSpH------GVSL---E-ELQSTYDAVVLATGSTI--P---RDLAIPNRDAKGIHFAMEFLHKN------TKSLL-DSKLE 1896
                  5778899999997776522......3344...1.233568********663..3...44466889*********655553......33344.66778 PP

                  TTEEEEEETTSEEEEEESSE..E CS
         DAO  251 rgvyvtprkdgrvlvGgtad..e 271 
                  +g y+ +  ++ +++Gg ++  +
  EPX72160.1 1897 DGEYISAKGKDVIVIGGGDTgnD 1919
                  88899999989888899875551 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.1   5.5e-05     0.041       2      30 ..    1768    1795 ..    1767    1813 .. 0.89
   2 ?    5.1   0.1     0.015        11     158     188 ..    1899    1929 ..    1813    1932 .. 0.75
   3 ?    4.7   0.0     0.021        16     249     305 .]    2016    2073 ..    1978    2073 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 5.5e-05
  Pyr_redox_3    2 IiGaGPaGlaaaielkkagledylilEkg 30  
                   +iG GPaGlaaa +l++ag  +++i E++
   EPX72160.1 1768 VIGSGPAGLAAADQLNHAGH-NVVIYERA 1795
                   8******************9.799*9997 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.015
  Pyr_redox_3  158 efhkyagqkvvViGgknSavDaAlelvrkga 188 
                   e+   +g++v+ViGg++++ D     vr+ga
   EPX72160.1 1899 EYISAKGKDVIVIGGGDTGNDCLGTSVRHGA 1929
                   34456799*************9999999887 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.021
  Pyr_redox_3  249 tedgkkvevkddvvlatGykpdlsflkk.slfeldedgrpvlteeteetnvpglflaG 305 
                    ++ +++   d v+la+G+    ++ ++ + + +d+ + +    +  +t vp+++ +G
   EPX72160.1 2016 VRNSEEFFPADLVILALGFLGPEEQATAsMDIRRDARSNISTPHKSYQTSVPNVYACG 2073
                   4556677778999*******99999887566777777788888899*********999 PP

>> Amino_oxidase  Flavin containing amine oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.1   1.2e-08   9.2e-06       2      30 ..    1774    1802 ..    1773    1805 .. 0.94

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 1.2e-08
                     HHHHHHHHHHHTTEEEEEEESSSSSBTTS CS
  Amino_oxidase    2 aGLaaArqLlsaGfdVtvlEardrvGGRi 30  
                     aGLaaA qL +aG++V+++E  dr+GG +
     EPX72160.1 1774 AGLAAADQLNHAGHNVVIYERADRPGGLL 1802
                     9**************************75 PP

>> FAD_binding_2  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.2   4.3e-07   0.00032       2      36 ..    1766    1800 ..    1765    1805 .. 0.90
   2 ?   -2.5   0.0       2.8   2.1e+03     389     403 ..    2063    2077 ..    2056    2085 .. 0.82

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 4.3e-07
                     EEEE--SHHHHHHHHHHHHTTT-EEEEESSSGGGS CS
  FAD_binding_2    2 viViGsGlAGLaAAleaaeaGlkvavvekeqefgg 36  
                     v ViGsG AGLaAA ++++aG++v++ e +++ gg
     EPX72160.1 1766 VAVIGSGPAGLAAADQLNHAGHNVVIYERADRPGG 1800
                     89*************************99887655 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 2.8
                     EESSBTEEE-STCEE CS
  FAD_binding_2  389 gqpipGLYAaGevaa 403 
                     ++ +p+ YA+G +  
     EPX72160.1 2063 QTSVPNVYACGDCRR 2077
                     5689*******9984 PP

>> FAD_oxidored  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.1   2.6e-07   0.00019       2      45 ..    1766    1809 ..    1765    1856 .. 0.84

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 2.6e-07
  FAD_oxidored    2 vvVvGGgpaGvaAAiaAaraGakvlLveergvlGGlltsglvat 45  
                    v V+G+gpaG+aAA +   aG +v++ e+ ++ GGll  g+ ++
    EPX72160.1 1766 VAVIGSGPAGLAAADQLNHAGHNVVIYERADRPGGLLQYGIPNM 1809
                    89**********************************98887554 PP

>> HI0933_like  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0     2e-07   0.00015       2      36 ..    1765    1799 ..    1764    1804 .. 0.94
   2 ?   -2.9   0.2       2.7     2e+03       2      12 ..    1907    1917 ..    1906    1928 .. 0.87

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 2e-07
                   SEEEE--SHHHHHHHHHHHHTT--EEEE-SSSSS- CS
  HI0933_like    2 dviviGgGaAGlmaAisaakrgkrVlllekakklg 36  
                   +v+viG G+AGl aA +++++g++V+++e+a+++g
   EPX72160.1 1765 RVAVIGSGPAGLAAADQLNHAGHNVVIYERADRPG 1799
                   79*****************************9988 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2.7
                   SEEEE--SHHH CS
  HI0933_like    2 dviviGgGaAG 12  
                   dviviGgG  G
   EPX72160.1 1907 DVIVIGGGDTG 1917
                   8*******988 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.1   5.9e-06    0.0044       1      59 [.    1765    1824 ..    1765    1847 .. 0.70
   2 ?    2.2   0.1      0.36   2.7e+02       2      22 ..    1908    1928 ..    1907    1932 .. 0.80

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 5.9e-06
                  EEEEECSSHHHHHHHHHHHHTTSEEEEEESSSSSSTTSSHHHHHHHHHHH.HHTTEEEEC CS
   Pyr_redox    1 kvvvvGgGyiglElAgalaelgkkVtvversdkllrllDeeaskilqekl.ekngievll 59  
                  +v+v+G+G  gl +A  l++ g++V + er+d++  ll   + ++  +k+  ++ i+++ 
  EPX72160.1 1765 RVAVIGSGPAGLAAADQLNHAGHNVVIYERADRPGGLLQYGIPNMKLDKFvVDRRIQLMV 1824
                  79*******************************996655555444444432333333333 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.36
                  EEEECSSHHHHHHHHHHHHTT CS
   Pyr_redox    2 vvvvGgGyiglElAgalaelg 22  
                  v+v+GgG++g ++ g+  ++g
  EPX72160.1 1908 VIVIGGGDTGNDCLGTSVRHG 1928
                  89********99877766666 PP

>> Thi4  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.64   4.8e+02      99     142 ..     797     846 ..     781     854 .. 0.76
   2 !   17.0   0.0   3.7e-06    0.0028      19      79 ..    1765    1826 ..    1759    1838 .. 0.86
   3 ?   -2.2   0.1       2.7     2e+03      17      30 ..    1905    1918 ..    1891    1923 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.64
                 HHHHHHHHHHT.STTEEEEESEEEEEEEEET.....BTEEEEEEEEEHHH CS
        Thi4  99 ftstllskvlq.lanvkllnavaveDlivre.....gegvaGvvinwtlv 142
                 ++s++   +lq   ++++++a+ ++D ++        ++++Gv  +  ++
  EPX72160.1 797 VMSKMGISTLQsYKGAQIFEALGIDDEVIERcfmgtASRIRGVTFEHIAL 846
                 6677765555525799**********888877886449999998887665 PP

  == domain 2  score: 17.0 bits;  conditional E-value: 3.7e-06
                  EEEEE--SHHHHHHHHHHHHCTTS-EEEEESSSS--TTTTTT..STTBSEEEEETTTHHHHHH CS
        Thi4   19 DvvivGaGssGLtaayylakkpdlkvailersvspGGGawlG..GqlfsaivvrkpakelLde 79  
                   v+++G+G++GL+aa  l ++ + +v+i er   pGG    G   +  ++ vv +  ++++de
  EPX72160.1 1765 RVAVIGSGPAGLAAADQLNHA-GHNVVIYERADRPGGLLQYGipNMKLDKFVVDRRIQLMVDE 1826
                  699*****************9.***************88777447999999999999998887 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 2.7
                  EEEEEEE--SHHHH CS
        Thi4   17 esDvvivGaGssGL 30  
                    Dv+++G+G +G 
  EPX72160.1 1905 GKDVIVIGGGDTGN 1918
                  57********9995 PP

>> FAD_binding_3  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.1   3.8e-06    0.0029       3      34 ..    1765    1796 ..    1763    1803 .. 0.92

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 3.8e-06
                     EEEEE--SHHHHHHHHHHHHTTHHEEEEESSS CS
  FAD_binding_3    3 dVlIVGaGpaGlmlallLseaGvrvvlvekrs 34  
                      V+++G+GpaGl +a  L  aG +vv+ e+ +
     EPX72160.1 1765 RVAVIGSGPAGLAAADQLNHAGHNVVIYERAD 1796
                     699************************99976 PP

>> FMN_dh  FMN-dependent dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   2.2   2.7e-05      0.02     233     307 ..    1109    1196 ..    1097    1200 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 2.7e-05
                  HHHTTESEEEE--GGG.....TSSTT---HHHCH.............HHHHHHH..SS-EEEESS--SHHHHHHHHHTT-SEEEESHHHHHHH CS
      FMN_dh  233 aveaGvdgivvSNHGG.....RqldgapatidvL.............peiveavggrievlvDgGirrGsDvlkAlalGAdavllGRpflygl 307 
                  +++a +d ivvS H G     R      + i+                 + + ++gr+ +  Dg i++G Dv+ A  lGA+  +++   l +l
  EPX72160.1 1109 VAKAKADHIVVSGHDGgtgasR-----WTGIKYAglpwelgvaethqTLVLNDLRGRVVIQTDGQIKTGRDVAIACLLGAEEWGFATTPLIAL 1196
                  678899********99555552.....44444433333333322222223566688************************9888887777776 PP

>> 2-Hacid_dh_C  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   4.9e-05     0.037      17      88 ..    1742    1814 ..    1729    1820 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 4.9e-05
                    HHHTTCC..HTTCCGSBS-GTTSEEEEES-SHHHHHHHHHHHHTT-EEEEESSSHHHHHCHHHHTCEECSHHHH CS
  2-Hacid_dh_C   17 evregew..ksekallgkelsgktvGiiGlGrIGqavakrlkafgmkviaydrskkkeeeeeelgvelvsleel 88  
                    ++ ++ w   + k  +  + s+k+v++iG G  G a+a+ l+  g +v++y+r  ++     ++g+  ++l+++
    EPX72160.1 1742 AIIDKAWeeGWIKPQPPANRSNKRVAVIGSGPAGLAAADQLNHAGHNVVIYERADRPGG-LLQYGIPNMKLDKF 1814
                    555555533223344555789********************************998776.77777777777665 PP

>> IlvN  Acetohydroxy acid isomeroreductase, NADPH-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       1.9   1.4e+03      40      74 ..     350     384 ..     342     389 .. 0.84
   2 ?   11.8   0.1   0.00018      0.13       4      37 ..    1763    1796 ..    1761    1800 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 1.9
                 HHHHHHHTT-EEEEHHHHHHT-SEEEE-S-HHHHH CS
        IlvN  40 svkkAkeegfevltvaeavkkadvvmiliPDelqk 74 
                 s + A ++ +e l v+  v+  + +m+liP+  q+
  EPX72160.1 350 SDSAAFDNVLELLCVNGTVSLPEAIMMLIPEAWQN 384
                 556777888999999999999*********99886 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 0.00018
                  TS-EEEES-SHHHHHHHHHHHHTT--EEEEE-TT CS
        IlvN    4 gkkiaviGyGsqGhaqalnlrdsgldvvvglreg 37  
                  +k++aviG G  G a a +l  +g +vv+  r++
  EPX72160.1 1763 NKRVAVIGSGPAGLAAADQLNHAGHNVVIYERAD 1796
                  89**************************977765 PP

>> NAD_binding_7  Putative NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.0    0.0057       4.2       6      39 ..    1762    1795 ..    1759    1861 .. 0.80
   2 ?    2.9   0.1       0.2   1.5e+02       3      31 ..    1901    1929 ..    1900    1932 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0057
  NAD_binding_7    6 kgkkvlvvGgGevAarkvrklleagakvtvvape 39  
                     ++k+v v+G G+ ++  + +l  ag +v+++  +
     EPX72160.1 1762 SNKRVAVIGSGPAGLAAADQLNHAGHNVVIYERA 1795
                     69***************************98766 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.2
  NAD_binding_7    3 ldlkgkkvlvvGgGevAarkvrklleaga 31  
                     +  kgk v+v+GgG+ +   + + ++ ga
     EPX72160.1 1901 ISAKGKDVIVIGGGDTGNDCLGTSVRHGA 1929
                     66799**********99876666666665 PP

>> Lycopene_cycl  Lycopene cyclase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.1    0.0005      0.38       2      34 ..    1766    1796 ..    1765    1800 .. 0.89

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.0005
  Lycopene_cycl    2 vvviGaGpAglslAarlteakpglkvvlieasp 34  
                     v+viG+GpAgl+ A +l  +++g +vv+ e ++
     EPX72160.1 1766 VAVIGSGPAGLAAADQL--NHAGHNVVIYERAD 1796
                     89***************..99999999988665 PP

>> GIDA  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.3   0.00013       0.1       2      28 ..    1766    1792 ..    1765    1816 .. 0.82
   2 ?   -0.5   0.2      0.67     5e+02       1      24 [.    1907    1930 ..    1907    1932 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00013
                  EEEE-SSHHHHHHHHHHHHTT--EEEE CS
        GIDA    2 viViGgGhAGceAAlaaarlGakvlLi 28  
                  v ViG G AG++AA ++  +G++v+++
  EPX72160.1 1766 VAVIGSGPAGLAAADQLNHAGHNVVIY 1792
                  89***********************99 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.67
                  CEEEE-SSHHHHHHHHHHHHTT-- CS
        GIDA    1 dviViGgGhAGceAAlaaarlGak 24  
                  dviViGgG  G  +  ++ r Gak
  EPX72160.1 1907 DVIVIGGGDTGNDCLGTSVRHGAK 1930
                  8**********9888777777776 PP

>> FMO-like  Flavin-binding monooxygenase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       4.1   3.1e+03     188     248 ..    1099    1159 ..    1084    1163 .. 0.73
   2 ?    6.8   0.0    0.0025       1.9       2      42 ..    1764    1804 ..    1763    1809 .. 0.95
   3 ?   -0.1   0.0      0.32   2.4e+02     138     204 ..    1850    1927 ..    1844    1933 .. 0.59

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 4.1
    FMO-like  188 viGlGnsggdiavelsrtaeqvllstrsGswvlsr...vsdsGypwdmllvtrfksllknilpt 248 
                   +G+G  ++ +a     +a+++++s + G+   sr   +   G pw++ ++   ++l+ n l  
  EPX72160.1 1099 EVGVGIVASGVAK---AKADHIVVSGHDGGTGASRwtgIKYAGLPWELGVAETHQTLVLNDLRG 1159
                  4566665555553...4789999999999998888443566899***99999999988887765 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0025
    FMO-like    2 kkvaviGaGvsGlasikccleegleptcfersddiGGlwrf 42  
                  k+vaviG+G +Gla+     + g + + +er+d  GGl ++
  EPX72160.1 1764 KRVAVIGSGPAGLAAADQLNHAGHNVVIYERADRPGGLLQY 1804
                  9************************************9876 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.32
    FMO-like  138 vfdavmvctGhhvnph..lplesfpGiekfkGqyfhsr.....dykepe....vfkgkrvlviGlGnsggdi.avelsr 204 
                   +dav++ tG  +     +p     Gi+ f  +++h +     d k  +      kgk v+viG G++g d   + + +
  EPX72160.1 1850 TYDAVVLATGSTIPRDlaIPNRDAKGIH-FAMEFLHKNtksllDSKLEDgeyiSAKGKDVIVIGGGDTGNDClGTSVRH 1927
                  6788888888877654115777777875.5555555431111223322211114589************9951444444 PP

>> AlaDh_PNT_C  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.1    0.0014       1.1      29      59 ..    1764    1794 ..    1759    1801 .. 0.91
   2 ?   -0.2   0.1      0.66   4.9e+02      30      53 ..    1907    1930 ..    1898    1934 .. 0.88

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0014
                   -EEEEESTSHHHHHHHHHHHHTT-EEEEEES CS
  AlaDh_PNT_C   29 akvlviGgGvaGlqAiatakglgakVtvlDv 59  
                    +v viG G aGl+A+   +  g +V++++ 
   EPX72160.1 1764 KRVAVIGSGPAGLAAADQLNHAGHNVVIYER 1794
                   589************************9986 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.66
                   EEEEESTSHHHHHHHHHHHHTT-E CS
  AlaDh_PNT_C   30 kvlviGgGvaGlqAiatakglgak 53  
                    v+viGgG  G   + t+++ gak
   EPX72160.1 1907 DVIVIGGGDTGNDCLGTSVRHGAK 1930
                   69***************9999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2119 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       603  (0.0336327); expected 358.6 (0.02)
Passed bias filter:                      575  (0.0320709); expected 358.6 (0.02)
Passed Vit filter:                        75  (0.00418317); expected 17.9 (0.001)
Passed Fwd filter:                        24  (0.00133861); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              24  [number of targets reported over threshold]
# CPU time: 1.39u 0.39s 00:00:01.77 Elapsed: 00:00:00.61
# Mc/sec: 10509.81
//
Query:       EPX72161.1  [L=694]
Description: Holliday junction resolvase subunit Eme1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-14   53.5   1.2    6.8e-14   52.4   1.0    1.7  1  ERCC4     ERCC4 domain
  ------ inclusion threshold ------
      0.069   11.9  12.7       0.12   11.1  12.7    1.2  1  MAP70     Microtubule-associated protein 70


Domain annotation for each model (and alignments):
>> ERCC4  ERCC4 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.4   1.0   7.5e-18   6.8e-14      17     155 ..     421     580 ..     406     581 .. 0.92

  Alignments for each domain:
  == domain 1  score: 52.4 bits;  conditional E-value: 7.5e-18
                 TTTSEEEEE--SSSSE.EE...CTT....................EEEEEEEHHHHHHHHCCSHHHHHHHHHHH.H-SE..EEEEEES-GGGTT..... CS
       ERCC4  17 elgvevvietlpigdyilwrrkvkaeynleldieepceek.....vlverksaddlvasikdgrleeqvsrlkrngykk..pillvegldqykrknkns 108
                    +evv  +++  + i w+rkv++  +     ++   e+     + + r  ++d+v +i d+ l++ ++  k  ++++   i+++eg ++ +++ k++
  EPX72161.1 421 PFSCEVVSVKQQPKNTISWKRKVNTFFDHAANRFDFVTEHiqnepFSLHRIPCSDFVTKIADNILDDYIKSCKL-QFPNnkLIIILEGVTSHFKNVKSD 518
                 44599999999***************99999999999999**********************999999999999.88888799999**88888889*** PP

                 ..........................THHH.HHHHHHHHHHHHS-EEEEESSHHHHHHHHHH CS
       ERCC4 109 rnkqykakvrq...............inrktiesaLvqlqldfgvsilttesanetaewlan 155
                 +n+qy+++v+                i+++ +es  + ++++++v + ++++++eta+w+ +
  EPX72161.1 519 INRQYANAVNTgtkpllfgslskyqtITKEVLESEVCRINVQHNVLLNYSNDEKETADWIVS 580
                 **************************99999****************************976 PP

>> MAP70  Microtubule-associated protein 70
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1  12.7   1.3e-05      0.12     288     465 ..     221     399 ..     216     410 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 1.3e-05
       MAP70 288 rflqgemqqlrdklaiaertakaeaqlkekyklrlkvleeglrasssgskreeselksvsngpsrrqslGgadnlsklssngllskrssss...qrssl 383
                 rf  +e q+  d       t+ +e q+k  y l     + gl+++ s+s+ ++s+ k +s ++sr   l    ++   s+ g  +kr+      ++ss 
  EPX72161.1 221 RFADSERQNQTDESDENFLTTSSEKQIKRNYGLSGLPTDSGLKNTDSNSSSSSSSSKPTSHESSRDPLLFDLPTVDLASTPG-SRKRTVDAlstNNSSH 318
                 6666777777777777777999************9999***********************999999999777776666666.5555443300023333 PP

       MAP70 384 lssss.slllkha.ksasksfdggkrsldrskvlsngakenselkestdetkeaeskdskkeaeeekesekakadsedlvsgll 465
                 l++s   + lk+  ++ sksf+g++   d++++++n+ ++++++ +    +k++  +   k+++e ++ +k k ++e+++s ++
  EPX72161.1 319 LTQSNdLQKLKKLkNIYSKSFQGST--NDNQEAVHNTLRKSKTMGKVG-LSKKKLDEAERKKNKELQKINKVKRTKEECLSEMI 399
                 3333202335554146789999985..366667777777666666643.33444444445555667777777777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (694 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1190  (0.0663729); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.31s 00:00:00.96 Elapsed: 00:00:00.48
# Mc/sec: 4387.78
//
Query:       EPX72162.1  [L=1130]
Description: glycerophosphoryl diester phosphodiesterase Gde1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-80  270.6   1.2    5.4e-80  268.9   0.0    2.2  2  GDPD        Glycerophosphoryl diester phosphodiesterase famil
      3e-21   75.8   0.0    5.2e-07   30.2   0.1    3.5  3  Ank_2       Ankyrin repeats (3 copies)
    6.9e-15   53.7   0.3     0.0018   18.6   0.0    6.7  6  Ank_3       Ankyrin repeat
    7.7e-15   55.1   0.3    2.5e-05   24.7   0.1    4.6  4  Ank_4       Ankyrin repeats (many copies)
    4.2e-13   49.2   0.2    3.8e-05   23.9   0.1    4.4  4  Ank_5       Ankyrin repeats (many copies)
    6.3e-12   45.4   0.9    0.00039   20.7   0.0    5.7  5  Ank         Ankyrin repeat
  ------ inclusion threshold ------
        3.5    8.1   7.4        3.2    8.2   4.5    2.5  2  Syntaxin_2  Syntaxin-like protein


Domain annotation for each model (and alignments):
>> GDPD  Glycerophosphoryl diester phosphodiesterase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.5       0.3   7.7e+02     113     198 ..     131     208 ..      63     227 .. 0.55
   2 !  268.9   0.0   2.1e-83   5.4e-80       1     258 [.     806    1119 ..     806    1120 .. 0.97

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.3
                 EECCCCCCCHHHHHHTCHHHCCCCCSCHHTT..STTCSCEEEESTHHHHHHHHHTCTCTEEEEEEHHHHHHC-E.EECHCCCCCCC CS
        GDPD 113 ipmlseakeeeelqivkeilksvdeilkkvlkkadkrkvifssfnpdilkllrekqpklpllflteggteaeadssleraakfaka 198
                 ++ ls+ +++++   ++e+  + ++++k  l++a+ +k++ +  +++++   ++k ++l++l+ ++++ +  +d      ++++++
  EPX72162.1 131 FEKLSTKMDKHL-GTDRETTFYERKVVK--LDFANSAKIYETLLSLKTWDNSQKKIDTLKKLEHISSKHPIKKD-----LLAYIQQ 208
                 333334444444.455555555555554..56666666665555555555555555566666555555555555.....4555555 PP

  == domain 2  score: 268.9 bits;  conditional E-value: 2.1e-83
                  TTTTTTTSS........TTSHHHHHHHHHTT-SEEEEEEEE-TTS-EEE-SSSBSTTTCSCCCH.BGGGS-HHHHHTST.................. CS
        GDPD    1 HRGasgnlp........EnTlesfakAaelGadyiEfDvqlTkDgvpVvlHDfnldrttdvagrldvkdltleelkrld.................. 71  
                  HRG+++n+p        EnT++sf+kAa+lGa+y+E+DvqlTkD vpVv+HDf++++t+++ +   v++ltle++ + +                  
  EPX72162.1  806 HRGLGKNQPdrltlqlgENTVQSFIKAADLGASYVELDVQLTKDKVPVVYHDFSVNETGTDTQ---VHSLTLEQFLSVShspsdkkmadelqeyslk 899 
                  ***************************************************************...******************************* PP

                  ................................ECCTTCCCCSCCCSSGCCB...BHHHHHHH.HHHCCSEEEEEEECCCCCCCHHHHHHTCHHHCCC CS
        GDPD   72 ................................kiakenkaqlsenrvrlefpfptleevlkk.pqnvglnieikipmlseakeeeelqivkeilksv 135 
                                                  +  k +k+++ ++ ++   pf tl ++l+k pq+vgln+e+k+pmlsea+ee +l ++++++++v
  EPX72162.1  900 rrpraysssvtrssdthlnllnllnsqeehsaTKHKVYKGNALGHSIC--APFNTLRDILEKvPQSVGLNVEFKYPMLSEAEEENLLPVAYDYNAFV 994 
                  ***********************9888887774447777777777777..6********************************************** PP

                  CCSCHHTT..STTCSCEEEESTHHHHHHHHHTCTCTEEEEEEHHHHHHC-E....EECHCCCCCCCTCCCCHHCCCHCCCEB.CHHHHHHHTT-EEE CS
        GDPD  136 deilkkvlkkadkrkvifssfnpdilkllrekqpklpllflteggteaead...ssleraakfakadallgevsavaeglgdpdlVkraksrglvvh 229 
                  d+il+++ k+++ r++ifssfnpd ++ll+ k + +p+lflteggt+ ++d   +sl+++++fa +++llg+vsa++++++ p+l+k++k+ +l ++
  EPX72162.1  995 DTILSVIQKHGGHRRYIFSSFNPDVCILLSLKCS-VPVLFLTEGGTAFRTDaraASLKNSMRFAAQWNLLGIVSACEPLIKSPRLIKAVKQLKLTCY 1090
                  **********************************.************************************************************** PP

                  EBSB-THSHHHHHHHHCCC-SEEEES-HH CS
        GDPD  230 vytvnnedeeemkrlleagvdgvitDfpd 258 
                  +y+v n+d ++++r++++gvd+vi+D++ 
  EPX72162.1 1091 TYGVLNNDTDNVRRQVRFGVDAVIVDNVL 1119
                  ***************************96 PP

>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   2.3e-06     0.006      20      75 ..     305     377 ..     285     386 .. 0.70
   2 !   30.2   0.1     2e-10   5.2e-07      29      82 ..     392     452 ..     384     453 .. 0.80
   3 !   24.2   0.0   1.4e-08   3.7e-05      25      73 ..     456     510 ..     451     517 .. 0.85

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 2.3e-06
       Ank_2  20 adpnkngktaLhyAakng....nleivklLle...h..........adndgrtpLhyAarsghleivklLlek 75 
                 ++ n++g+t++h Aa++g    ++e++k++ +   +          +d    tpL +A+r +h +++  Ll +
  EPX72162.1 305 VERNSKGQTVMHSAAEAGfdtlSNEFCKIISSipsAeplnwmrpywFDVMQDTPLTLAIRGNHVKVLHALLSC 377
                 3333489**********96655557899999755515655655666668899********9*******99954 PP

  == domain 2  score: 30.2 bits;  conditional E-value: 2e-10
       Ank_2  29 aLhyAakngnl.eivklLleh...ad...ndgrtpLhyAarsghleivklLlekgadinlk 82 
                 +L + +  g++  ++k Ll++   ++    +g t+Lh+A+r+ +l +vk+L+++gad n++
  EPX72162.1 392 PLVLVCLVGDNaGLIKELLDAgfnVNehdAKGSTALHAAVRNHRLSCVKMLIQYGADQNIR 452
                 677777777532569****966564455578**********999********99**99986 PP

  == domain 3  score: 24.2 bits;  conditional E-value: 1.4e-08
       Ank_2  25 ngktaLhyAakngnleivklLleh......adndgrtpLhyAarsghleivklLl 73 
                 + +t+L++A   g  ei+k L+e       +d +g+t++ +A+  g+ e+++lL 
  EPX72162.1 456 FSWTPLMLAGALGFSEIMKVLIELgspvdeVDASGWTAMEHAVVRGNMEVLDLLQ 510
                 569**********99*******955675678899******************884 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0      0.14   3.5e+02       2      16 ..     311     325 ..     310     338 .. 0.85
   2 !    6.5   0.0     0.006        15       3      23 ..     356     376 ..     354     380 .. 0.91
   3 ?    5.2   0.0     0.016        42       5      30 ..     392     417 ..     390     418 .. 0.92
   4 !   18.6   0.0     7e-07    0.0018       2      31 .]     423     451 ..     422     451 .. 0.94
   5 !    7.1   0.0    0.0039        10       3      30 ..     458     484 ..     456     485 .. 0.91
   6 ?    4.8   0.0     0.021        54       2      21 ..     490     509 ..     489     514 .. 0.89

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.14
       Ank_3   2 GetpLhlAarsgnle 16 
                 G+t +h Aa++g  +
  EPX72162.1 311 GQTVMHSAAEAGFDT 325
                 9*********99875 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.006
       Ank_3   3 etpLhlAarsgnleivkfLle 23 
                  tpL lA+r ++++++++Ll 
  EPX72162.1 356 DTPLTLAIRGNHVKVLHALLS 376
                 69*****************97 PP

  == domain 3  score: 5.2 bits;  conditional E-value: 0.016
       Ank_3   5 pLhlAarsgnle.ivkfLlenkgadvn 30 
                 pL l+++ g+ + ++k Ll+  g +vn
  EPX72162.1 392 PLVLVCLVGDNAgLIKELLD-AGFNVN 417
                 999********999******.8*9999 PP

  == domain 4  score: 18.6 bits;  conditional E-value: 7e-07
       Ank_3   2 GetpLhlAarsgnleivkfLlenkgadvna 31 
                 G t+Lh A+r+ +l+ vk+L++ +gad n+
  EPX72162.1 423 GSTALHAAVRNHRLSCVKMLIQ-YGADQNI 451
                 89********************.****885 PP

  == domain 5  score: 7.1 bits;  conditional E-value: 0.0039
       Ank_3   3 etpLhlAarsgnleivkfLlenkgadvn 30 
                 +tpL+lA   g  ei+k L+e  g +v+
  EPX72162.1 458 WTPLMLAGALGFSEIMKVLIE-LGSPVD 484
                 8********************.898776 PP

  == domain 6  score: 4.8 bits;  conditional E-value: 0.021
       Ank_3   2 GetpLhlAarsgnleivkfL 21 
                 G+t++ +A+  gn e++++L
  EPX72162.1 490 GWTAMEHAVVRGNMEVLDLL 509
                 9**************87776 PP

>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0      0.16     4e+02      30      46 ..     307     322 ..     291     325 .. 0.86
   2 !    6.6   0.0    0.0046        12      35      55 .]     355     375 ..     351     375 .. 0.94
   3 !   24.7   0.1   9.8e-09   2.5e-05      16      55 .]     405     443 ..     401     443 .. 0.95
   4 !   16.0   0.0   5.5e-06     0.014      15      54 ..     471     509 ..     458     510 .. 0.92

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.16
       Ank_4  30 qdnrsGetalhiAakrg 46 
                 + n+ G+t +h Aa  g
  EPX72162.1 307 R-NSKGQTVMHSAAEAG 322
                 4.889********9887 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0046
       Ank_4  35 GetalhiAakrgnveilklLl 55 
                 ++t+l  A+++++v++l+ Ll
  EPX72162.1 355 QDTPLTLAIRGNHVKVLHALL 375
                 58****************997 PP

  == domain 3  score: 24.7 bits;  conditional E-value: 9.8e-09
       Ank_4  16 lvrlLlekgadinaqdnrsGetalhiAakrgnveilklLl 55 
                 l++ Ll+ g ++n+  ++ G talh A+++ +++++k+L+
  EPX72162.1 405 LIKELLDAGFNVNEH-DAKGSTALHAAVRNHRLSCVKMLI 443
                 6899**********8.***********************8 PP

  == domain 4  score: 16.0 bits;  conditional E-value: 5.5e-06
       Ank_4  15 elvrlLlekgadinaqdnrsGetalhiAakrgnveilklL 54 
                 e+ + L+e g  ++++ ++sG+ta+ +A+ rgn e+l lL
  EPX72162.1 471 EIMKVLIELGSPVDEV-DASGWTAMEHAVVRGNMEVLDLL 509
                 67899***********.*******************9988 PP

>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.22   5.6e+02      13      27 ..     308     322 ..     302     331 .. 0.85
   2 ?    1.5   0.0      0.15   3.9e+02      15      36 ..     349     375 ..     341     384 .. 0.73
   3 !   23.9   0.1   1.5e-08   3.8e-05       1      46 [.     409     453 ..     409     454 .. 0.95
   4 !   17.3   0.0   1.7e-06    0.0044      14      56 .]     455     497 ..     449     497 .. 0.90

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.22
       Ank_5  13 dgggntpLhvAakyg 27 
                 + +g+t++h Aa++g
  EPX72162.1 308 NSKGQTVMHSAAEAG 322
                 77999*******988 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.15
       Ank_5  15 ggn.....tpLhvAakygaadvvrlLl 36 
                 +++     tpL +A+++++  v+  Ll
  EPX72162.1 349 YWFdvmqdTPLTLAIRGNHVKVLHALL 375
                 55555555***********99988888 PP

  == domain 3  score: 23.9 bits;  conditional E-value: 1.5e-08
       Ank_5   1 LlehgpadvnrldgggntpLhvAakygaadvvrlLlargadlnltd 46 
                 Ll++g  +vn  d +g t+Lh A++++++++v++L+ +gad n+++
  EPX72162.1 409 LLDAG-FNVNEHDAKGSTALHAAVRNHRLSCVKMLIQYGADQNIRE 453
                 89999.99999999***************************99987 PP

  == domain 4  score: 17.3 bits;  conditional E-value: 1.7e-06
       Ank_5  14 gggntpLhvAakygaadvvrlLlargadlnltdsrGltaldlA 56 
                 +++ tpL++A   g ++++++L++ g+  +  d++G+ta+++A
  EPX72162.1 455 PFSWTPLMLAGALGFSEIMKVLIELGSPVDEVDASGWTAMEHA 497
                 4455*************************************98 PP

>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       1.2   3.1e+03       2      12 ..     311     321 ..     310     335 .. 0.75
   2 !   10.0   0.0   0.00039         1       3      23 ..     356     377 ..     354     384 .. 0.87
   3 ?    2.6   0.1     0.081   2.1e+02      14      31 ..     402     420 ..     392     421 .. 0.74
   4 !   20.7   0.0   1.5e-07   0.00039       2      30 ..     423     452 ..     422     454 .. 0.89
   5 ?    4.6   0.0      0.02        51       3      28 ..     458     484 ..     458     526 .. 0.61

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1.2
                 SBBHHHHHHHH CS
         Ank   2 GnTPLHlAatn 12 
                 G T+ H Aa  
  EPX72162.1 311 GQTVMHSAAEA 321
                 99******933 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00039
                 BBHHHHHHHHTTHHHHHHHH.T CS
         Ank   3 nTPLHlAatngkkriiklLL.h 23 
                 +TPL lA++++++ ++++LL +
  EPX72162.1 356 DTPLTLAIRGNHVKVLHALLsC 377
                 7**********9*******943 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.081
                 THHHHHHHH.TTTSTTCBT CS
         Ank  14 kkriiklLL.hGAnlnald 31 
                 ++  ik+LL  G n+n +d
  EPX72162.1 402 NAGLIKELLdAGFNVNEHD 420
                 3449*****6699***998 PP

  == domain 4  score: 20.7 bits;  conditional E-value: 1.5e-07
                 SBBHHHHHHHHTTHHHHHHHH.TTTSTTCB CS
         Ank   2 GnTPLHlAatngkkriiklLL.hGAnlnal 30 
                 G T+LH A++n  ++++k+L+ +GA+ n++
  EPX72162.1 423 GSTALHAAVRNHRLSCVKMLIqYGADQNIR 452
                 89*******8777********77***9986 PP

  == domain 5  score: 4.6 bits;  conditional E-value: 0.02
                 BBHHHHH.HHHTTHHHHHHHH.TTTSTT CS
         Ank   3 nTPLHlA.atngkkriiklLL.hGAnln 28 
                 +TPL+lA a  g  +i k L+  G+ ++
  EPX72162.1 458 WTPLMLAgA-LGFSEIMKVLIeLGSPVD 484
                 6*****652.333446666653343333 PP

>> Syntaxin_2  Syntaxin-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   4.5    0.0013       3.2       8      80 ..      70     139 ..      66     144 .. 0.70
   2 ?   -1.2   0.1         1   2.7e+03      18      62 ..     138     179 ..     136     204 .. 0.53

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0013
  Syntaxin_2   8 insnvstleklvkqLgtkkd...teelreklhelieeinelikktnellkklsqldnsssdsqqklqkekLkkdfk 80 
                 +++n+s+l+ +++ L++  d   t + + + +e+ +e n+ +k+   +l+kls+ ++      +kl+ ekL++++ 
  EPX72162.1  70 FSTNISQLNAYISRLSKEDDleiTHQHNGSSNES-QERNKQVKDLDLRLQKLSSFAEW-----NKLAFEKLSTKMD 139
                 799*************997755444444443333.44466667777777777777665.....5899999998765 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 1
  Syntaxin_2  18 lvkqLgtkkdteelreklhelieeinelikktnellkklsqldns 62 
                 + k+Lgt+++t+ + +k+ +l       + k+ e l +l+++dns
  EPX72162.1 138 MDKHLGTDRETTFYERKVVKLDFAN---SAKIYETLLSLKTWDNS 179
                 5667777777766665554443222...22333333344444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1130 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       647  (0.0360868); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.82u 0.30s 00:00:01.11 Elapsed: 00:00:00.48
# Mc/sec: 7143.70
//
Query:       EPX72163.1  [L=778]
Description: chitinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (778 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       966  (0.0538792); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        98  (0.005466); expected 17.9 (0.001)
Passed Fwd filter:                        26  (0.00145016); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.32u 0.33s 00:00:01.65 Elapsed: 00:00:00.51
# Mc/sec: 4561.55
//
Query:       EPX72164.1  [L=590]
Description: DNA-directed RNA polymerase III complex subunit Rpc82 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.3e-49  168.5   2.7    4.2e-49  167.6   2.7    1.4  1  RNA_pol_Rpc82  RNA polymerase III subunit RPC82
    8.5e-21   73.8   0.7    2.6e-19   69.1   0.1    2.8  3  HTH_9          RNA polymerase III subunit RPC82 helix-turn-he
    3.5e-10   39.7   0.6    0.00055   19.7   0.0    2.8  2  TFIIE_alpha    TFIIE alpha subunit
      0.002   18.0   0.8       0.35   10.8   0.0    3.8  4  TrmB           Sugar-specific transcriptional regulator TrmB
  ------ inclusion threshold ------
      0.066   13.0   2.2       0.18   11.6   0.2    2.6  3  HTH_IclR       IclR helix-turn-helix domain


Domain annotation for each model (and alignments):
>> RNA_pol_Rpc82  RNA polymerase III subunit RPC82
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  167.6   2.7   1.2e-52   4.2e-49       2     258 .]     145     423 ..     144     423 .. 0.88

  Alignments for each domain:
  == domain 1  score: 167.6 bits;  conditional E-value: 1.2e-52
                    HHHHHHTTSSEEESSSTTTS-HHHHHHHHHHHTHTTSSSSSSSSTHHHHHHHHHHHHHHHHHHHHHHHSGT....T..TTCETSSSSSEE...... CS
  RNA_pol_Rpc82   2 sfvkLveagflqrvpslhfrpiedlwnalyeeelkktprssttseikkkaeakekiktelrdlresseslkkkegrstadstsngtarKrrk.... 93 
                    ++++L+  ++ ++v++ h+ p++d++++l+ + l++++ s+++seikk++e +++++ e+++l  s +  ++++ r+++ds+  + +rKrr+    
     EPX72164.1 145 NITDLIYLKYFVVVQPRHLIPVGDQEMQLRIKFLEQRK-SENVSEIKKNREVNDSVALEMAQLQSSDMAENQGLIRKPKDSIPRPAKRKRRNvtts 239
                    6899*********************************9.********************************9999***************99**** PP

                    ..................E-TSSEEEE-SHHHHHHHHHHHHHHHHHHHS-SHHHHHHHHHHHHTSTSS-GSS-TTSHHHHHHTTTCSCSSTHHHH- CS
  RNA_pol_Rpc82  94 ............etea..ldpglvlriNlerflvhlRdeaLvqlaksrigettaevyeaaLklleersprlsadllleeedkksitftandiaral 175
                                e+++  +dp  ++riN  +f    R+++Lv++a++rig+tta vy ++L +le++     ++           t+t+++++r++
     EPX72164.1 240 smtgdmneilddENSIllPDPAAHVRINRAKFSFLARNQRLVHWAERRIGKTTAIVYSHLLAVLESKFAGSPTP-------ATILTITTMELTRNF 328
                    **********985554226999********************************************99998888.......8889*********** PP

                    STT-----------..---------.-----........-------.----....---HHHHHHHHHHHHHSSSSSSCSEET...TEBE-SSTTTH CS
  RNA_pol_Rpc82 176 pksldlsksigKrk..ssnssaaek.kklkt........eeseees.eeng....qarlslieqhLklLasdsleflrkigpsggGeytVdfsrli 255
                    pk++d++    K +    + sa++   +l +        e   +e+ een     +++++++ qhL+lLa+ sl f++++g++g+Ge+ +df  l+
     EPX72164.1 329 PKDIDVESCFAKSSnvR-KPSAKAAlDQLDElemdeqeeE---DEDyEENVdeerNNKSKVLVQHLELLADTSLRFITRVGNRGMGEWKIDFAYLT 420
                    *********98888642.3333333355555666764321...2224333345569************************************9999 PP

                    HHH CS
  RNA_pol_Rpc82 256 eqL 258
                    ++L
     EPX72164.1 421 NML 423
                    876 PP

>> HTH_9  RNA polymerase III subunit RPC82 helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.1   0.1   7.1e-23   2.6e-19       2      61 ..       8      67 ..       7      68 .. 0.98
   2 ?   -2.8   0.0         2   7.2e+03      12      24 ..     289     301 ..     287     302 .. 0.87
   3 ?    2.2   0.0     0.055     2e+02       5      51 ..     430     476 ..     428     480 .. 0.88

  Alignments for each domain:
  == domain 1  score: 69.1 bits;  conditional E-value: 7.1e-23
                HHHHHHHHCSTTHHHHHHHHHHHHSSBEHHHHHHHHSSTHHHHHHHHHHHHHTTSEEEEE CS
       HTH_9  2 lcteiieehFGevvakVvetLlrkgrltlrelvkktkLsldqVkksLvvLiqhrlVqyle 61
                lc+++++e+FGe+++ V++ Llr+gr  l ++ k+t+L+ ++++++L++L+qh++V +++
  EPX72164.1  8 LCEILVDEFFGECCSEVASILLRHGRMNLPMIMKRTSLPGSKIRQALASLMQHHMVLFVT 67
                9*********************************************************86 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 2
                 TTHHHHHHHHHHH CS
       HTH_9  12 GevvakVvetLlr 24 
                 G++ a V+++Ll+
  EPX72164.1 289 GKTTAIVYSHLLA 301
                 889999****996 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.055
                 HHHHHCSTTHHHHHHHHHHHHSSBEHHHHHHHHSSTHHHHHHHHHHH CS
       HTH_9   5 eiieehFGevvakVvetLlrkgrltlrelvkktkLsldqVkksLvvL 51 
                  i++e +G+++ +  + + +kg+   ++l++ + L  +  +++L ++
  EPX72164.1 430 NILDEKLGDRATRLLRIIKDKGKIEEKQLANIALLRQKDLRTVLQSM 476
                 59999*****************9999999998888888888888776 PP

>> TFIIE_alpha  TFIIE alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   1.5e-07   0.00055       3      95 ..       9     108 ..       7     116 .. 0.89
   2 !   17.3   0.2   9.1e-07    0.0033       6     103 ..     431     531 ..     427     533 .. 0.88

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 1.5e-07
                  HHHHHHHCS-HHHHHHHHHHHCTTSEBHHHHHHHHTS-HHHHHHHHHHHHHCTSEEEEEEEE.......TTTEEEEEEEEEECCCHCCCHHHHHHHHH CS
  TFIIE_alpha   3 lkevvrkfygeeavlvldvLlekgevteedlakelkidlnelrklLnrLyearlvkykrrrd.......eekswykyywrinyeklvdvvkrkleevv 93 
                   + +v +f+ge   +v  +Ll++g ++   + k +++   ++r++L+ L +  +v ++ + +        e +w++ y +i + k v+ v++kl++  
   EPX72164.1   9 CEILVDEFFGECCSEVASILLRHGRMNLPMIMKRTSLPGSKIRQALASLMQHHMVLFVTAIEqlrevtyYEAQWQEMYNLIRKGKDVYSVSQKLNQET 106
                  567899************************************************9887777766669888999*******************999865 PP

                  HH CS
  TFIIE_alpha  94 kk 95 
                    
   EPX72164.1 107 AS 108
                  55 PP

  == domain 2  score: 17.3 bits;  conditional E-value: 9.1e-07
                  HHHHCS-HHHHHHHHHHHCTTSEBHHHHHHHHTS-HHHHHHHHHHHHHCT...SEEEEEEEETTTEEEEEEEEEECCCHCCCHHHHHHHHHHHHHHHH CS
  TFIIE_alpha   6 vvrkfygeeavlvldvLlekgevteedlakelkidlnelrklLnrLyear...lvkykrrrdeekswykyywrinyeklvdvvkrkleevvkkLeekl 100
                  ++ +  g+ a   l ++  kg++ e +la+   + ++ lr +L  + e +   l ++ r+ d   s   y w+  +e++  +  ++l ev+ k+ + l
   EPX72164.1 431 ILDEKLGDRATRLLRIIKDKGKIEEKQLANIALLRQKDLRTVLQSMAEMGaleLQEVPRSSDRAPSKTFYLWFHRPERAYSIFLDQLYEVIAKMFHRL 528
                  67788999**************************************9997222556678999888888899****************99999998888 PP

                  CCC CS
  TFIIE_alpha 101 eke 103
                  ++e
   EPX72164.1 529 RDE 531
                  877 PP

>> TrmB  Sugar-specific transcriptional regulator TrmB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.0   9.7e-05      0.35      16      52 ..      27      63 ..      22      80 .. 0.89
   2 ?   -2.5   0.0       1.4   4.9e+03      20      41 ..      90     111 ..      88     114 .. 0.73
   3 ?   -0.3   0.0      0.28     1e+03      29      56 ..     339     366 ..     337     372 .. 0.85
   4 ?    2.0   0.0     0.054   1.9e+02      22      58 ..     452     488 ..     443     501 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 9.7e-05
                HHHHHCCCHHCHHCCCTTSSCHCHHHHHHHHHHCTSE CS
        TrmB 16 aLlklgpatadeiaeelgvprskvYevLrsLedkGlV 52
                 Ll++g+++   i +++ +p sk+ ++L sL++  +V
  EPX72164.1 27 ILLRHGRMNLPMIMKRTSLPGSKIRQALASLMQHHMV 63
                799*****************************99888 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.4
                 HCCCHHCHHCCCTTSSCHCHHH CS
        TrmB  20 lgpatadeiaeelgvprskvYe 41 
                 ++ ++++ ++++l+ + +++ +
  EPX72164.1  90 RKGKDVYSVSQKLNQETASIAK 111
                 5677888899988888777755 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.28
                 CCCTTSSCHCHHHHHHHHHHCTSEEEES CS
        TrmB  29 aeelgvprskvYevLrsLedkGlVerek 56 
                 a+ ++v ++++  +L +L +  + e e+
  EPX72164.1 339 AKSSNVRKPSAKAALDQLDELEMDEQEE 366
                 6899**************9988876666 PP

  == domain 4  score: 2.0 bits;  conditional E-value: 0.054
                 CCHHCHHCCCTTSSCHCHHHHHHHHHHCTSEEEESST CS
        TrmB  22 patadeiaeelgvprskvYevLrsLedkGlVerekgr 58 
                 + + +++a+++ + +     vL+s+ ++G  e ++  
  EPX72164.1 452 KIEEKQLANIALLRQKDLRTVLQSMAEMGALELQEVP 488
                 55667777777788888889*********99988765 PP

>> HTH_IclR  IclR helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.2   5.1e-05      0.18      14      48 ..      30      63 ..      26      65 .. 0.88
   2 ?   -2.6   0.0       1.4   4.8e+03       3      14 ..     438     449 ..     438     460 .. 0.85
   3 ?   -0.7   0.0      0.34   1.2e+03      10      34 ..     474     497 ..     469     501 .. 0.51

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 5.1e-05
                TTBSS-BHHHHHHHHTS-HHHHHHHHHHHHHTTSE CS
    HTH_IclR 14 eapqeltlselArrtglpkStvhRlLqtLvelGyv 48
                ++++ ++l  + +rt lp S+ +  L++L+++ +v
  EPX72164.1 30 RHGR-MNLPMIMKRTSLPGSKIRQALASLMQHHMV 63
                4455.9*************************9776 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.4
                 HHHHHHHCT-CT CS
    HTH_IclR   3 dRalaiLdalae 14 
                 dRa ++L+++  
  EPX72164.1 438 DRATRLLRIIKD 449
                 799999999876 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.34
                 CT-CTTBSS-BHHHHHHHHTS-HHH CS
    HTH_IclR  10 dalaeapqeltlselArrtglpkSt 34 
                 +  ae +  l l+e+ r ++ ++S+
  EPX72164.1 474 QSMAEMGA-LELQEVPRSSDRAPSK 497
                 33333333.5555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (590 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1278  (0.0712812); expected 358.6 (0.02)
Passed bias filter:                      534  (0.0297841); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.41
# Mc/sec: 4336.81
//
Query:       EPX72165.1  [L=819]
Description: DNA polymerase alpha accessory factor Mcl1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.6e-97  326.4   0.2    2.4e-96  322.6   0.0    2.4  2  Mcl1_mid       Minichromosome loss protein, Mcl1, middle regi
    1.4e-17   63.8   0.5    3.3e-08   33.7   0.1    5.6  7  ANAPC4_WD40    Anaphase-promoting complex subunit 4 WD40 doma
    5.6e-13   49.1   5.8    0.00055   20.7   0.1    7.0  7  WD40           WD domain, G-beta repeat
    0.00024   20.3   1.1     0.0099   15.0   0.9    2.2  2  Coatomer_WDAD  Coatomer WD associated region
     0.0015   17.9   0.0      0.056   12.7   0.0    2.3  2  RAB3GAP2_N     Rab3 GTPase-activating protein regulatory subu
     0.0028   17.6   0.4        1.2    9.0   0.1    2.7  2  eIF2A          Eukaryotic translation initiation factor eIF2A
  ------ inclusion threshold ------
       0.02   13.4   0.1        3.2    6.2   0.0    2.5  2  Cytochrom_D1   Cytochrome D1 heme domain
      0.042   13.8   0.5        5.6    7.0   0.0    3.5  3  PD40           WD40-like Beta Propeller Repeat
      0.068   12.5   0.7       0.29   10.4   0.1    2.3  3  WD40_like      WD40-like domain


Domain annotation for each model (and alignments):
>> Mcl1_mid  Minichromosome loss protein, Mcl1, middle region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.3     0.098     2e+02     111     200 ..      58     156 ..      29     292 .. 0.54
   2 !  322.6   0.0   1.2e-99   2.4e-96       1     296 [.     419     707 ..     419     708 .. 0.96

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.098
    Mcl1_mid 111 vtavalgkkwvavaTskrylRiFslsGvqlav.............lslpgpvVtlaaskdklavvyhegaplngnqeleyslldlskkkkkvlqregpl 196
                 +t++a++k+  + +++  ++ ++ ++  + ++             +s++g+ V++++ +  +  v+  +++l++ ++l+ s     +k+ ++  +e+ l
  EPX72165.1  58 ITGIAVSKTHFCTCSEDATICVYPINNSSEHTllarttlpvrdiaYSTDGNWVAISSDETAVKLVN--TKELTQIHSLRPSKTS--NKHVSFSPNEKFL 152
                 555555555555555555555555544444444444444444444444444444444444444444..2222222222222222..2222333334444 PP

    Mcl1_mid 197 pLsp 200
                 ++s 
  EPX72165.1 153 AISS 156
                 4433 PP

  == domain 2  score: 322.6 bits;  conditional E-value: 1.2e-99
    Mcl1_mid   1 kpfqpgstplgeegdrryLawNsiGvvttveedeeensieveFhDtslhrevhftdsfgftlasLseeglllAskaskseekkpstlyyrpleswasns 99 
                 kp+  gstp++  g+rryL++N +G+++tv++d+ +n+i+veFhD++ hr++hf d+++f+ a+L eeg+l++++a+++   +p+++yy+p+ +w++ s
  EPX72165.1 419 KPVYAGSTPWQ--GNRRYLCLNLVGFIWTVQQDDGHNTITVEFHDETNHRRYHFPDDQKFETACLDEEGALFSAPATEQ---SPGVIYYKPHVDWSRRS 512
                 57889******..67*********************************************************9999766...59***********999* PP

    Mcl1_mid 100 eWsvkLpeg.EevtavalgkkwvavaTskrylRiFslsGvqlavlslpg.pvVtlaaskdklavvyhegap.lngnqeleyslldlskkkkkvlqregp 195
                 eW + Lp + E+  +++l+++ ++v+T+++y+Ri+s  G+++++++ ++ p+V+++a++d +++v  +g+p ++g+ +l y++ d+sk+   v+q+++ 
  EPX72165.1 513 EWALMLPMEdESPVSITLSSNVIVVCTTSGYVRIYSRTGFPISMYRSKQlPFVACSAFQDLVMIVA-NGGPaADGTPQLVYTIEDTSKN--YVYQSNDG 608
                 *******999********************************************************.55556*************9888..69****** PP

    Mcl1_mid 196 lpLspgstLkwlgFseegdpviydsdgvlrvlskarepkqarWvpvldtkklakkksskedsyWpvgvsedklqcillkgsekyPsvlprpllselelk 294
                 l+L+p+ +L++++Fs+ gdp+++ds+g+l+vl ++r+p qa+W+pvldt++++++ks +++syWpv v++++++cillkg+ +yP++ prp+ +e++++
  EPX72165.1 609 LALPPNGELQSIFFSDVGDPYMFDSNGILLVLLHWRTPGQAKWTPVLDTNEMERRKS-RQESYWPVTVADNQFHCILLKGNARYPYF-PRPMFTEFPFR 705
                 ******************************************************977.6799*************************.*********** PP

    Mcl1_mid 295 lP 296
                 +P
  EPX72165.1 706 IP 707
                 ** PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.36   7.2e+02      40      85 ..      15      59 ..       6      70 .. 0.82
   2 !   12.0   0.0   9.8e-05      0.19      36      81 ..      93     138 ..      68     142 .. 0.84
   3 !    9.8   0.0   0.00047      0.94      42      76 ..     141     175 ..     136     183 .. 0.89
   4 ?    3.9   0.0     0.033        66      43      71 ..     191     219 ..     177     230 .. 0.77
   5 !   33.7   0.1   1.6e-11   3.3e-08       9      90 ..     200     279 ..     192     281 .. 0.89
   6 ?   -1.6   0.0       1.8   3.5e+03      51      67 ..     533     549 ..     527     571 .. 0.77
   7 ?   -3.4   0.0       6.3   1.3e+04      14      26 ..     746     758 ..     745     765 .. 0.79

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.36
  ANAPC4_WD40 40 evrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavt 85
                   + La+  dg+ L  + s+  +r +++ s +  +s++ +++  +t
   EPX72165.1 15 GLTRLAYTLDGTYLLTVGSNLVIRKFQVGSDEEPESIDNHQDP-IT 59
                 57899***************99999999999999999988885.44 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 9.8e-05
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                   +   vr++a++ dg+  a++ ++++v+l++ ++ + +hsl+ +++
   EPX72165.1  93 RTTLPVRDIAYSTDGNWVAISSDETAVKLVNTKELTQIHSLRPSKT 138
                  56789**********************************9988765 PP

  == domain 3  score: 9.8 bits;  conditional E-value: 0.00047
  ANAPC4_WD40  42 rsLaWkpdgklLavaysdgevrlldaesgkvvhsl 76 
                  ++++++p++k+La++  +g + ++da+s ++v+ l
   EPX72165.1 141 KHVSFSPNEKFLAISSCNGILYFYDAQSRNLVKFL 175
                  6799************************9998765 PP

  == domain 4  score: 3.9 bits;  conditional E-value: 0.033
  ANAPC4_WD40  43 sLaWkpdgklLavaysdgevrlldaesgk 71 
                  +  W+p +  +ava s+++v++++  +  
   EPX72165.1 191 KAIWHPFDGTFAVADSENQVSVISTDDWL 219
                  556*******************9987655 PP

  == domain 5  score: 33.7 bits;  conditional E-value: 1.6e-11
  ANAPC4_WD40   9 LiAlatedgellvfRl.ngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                   +A+a +++++ v  + ++  +++l+ +++ s+++++aW+ +g++La ++ d+ + + d +s+++v++ ++++   v++l W+
   EPX72165.1 200 TFAVADSENQVSVISTdDWLALYKLSPKENYSSITDVAWSSNGRFLAASFRDSGILIWDTYSKEIVSEHHYQN---VVSLAWQ 279
                  579999*****9988868************************************************9987663...6889996 PP

  == domain 6  score: -1.6 bits;  conditional E-value: 1.8
  ANAPC4_WD40  51 klLavaysdgevrllda 67 
                  ++++v +  g vr+++ 
   EPX72165.1 533 NVIVVCTTSGYVRIYSR 549
                  789999*******9974 PP

  == domain 7  score: -3.4 bits;  conditional E-value: 6.3
  ANAPC4_WD40  14 tedgellvfRlng 26 
                  +e+++l+v Rl+ 
   EPX72165.1 746 NEEQQLQVTRLEA 758
                  6889999999865 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.84   1.7e+03       9      29 ..      11      33 ..       5      41 .. 0.79
   2 ?    4.7   0.0     0.032        64       9      37 ..      53      80 ..      47      80 .. 0.77
   3 !   10.4   0.0   0.00051         1      12      36 ..      97     121 ..      85     123 .. 0.81
   4 !    7.0   0.0     0.006        12      15      38 .]     142     165 ..     127     165 .. 0.82
   5 !   20.7   0.1   2.8e-07   0.00055      10      38 .]     229     258 ..     222     258 .. 0.89
   6 ?    0.4   0.0      0.72   1.4e+03       9      25 ..     268     285 ..     262     292 .. 0.78
   7 ?   -1.5   0.0       2.9   5.7e+03      23      37 ..     533     547 ..     505     548 .. 0.61

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.84
                SS.SSEEEEEEETTSSEEEE.EE CS
        WD40  9 GH.ssvtslafspdgawlas.Gs 29
                +H ++ t la+  dg++l++ Gs
  EPX72165.1 11 AHtDGLTRLAYTLDGTYLLTvGS 33
                797779***********985155 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.032
                SS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  9 GH.ssvtslafspdgawlasGsdDgtvriW 37
                 H +++t++a+  +++ ++++s+D t+ ++
  EPX72165.1 53 NHqDPITGIAV--SKTHFCTCSEDATICVY 80
                69777999944..5666779*******986 PP

  == domain 3  score: 10.4 bits;  conditional E-value: 0.00051
                 SEEEEEEETTSSEEEEEETTSEEEE CS
        WD40  12 svtslafspdgawlasGsdDgtvri 36 
                 +v+++a+s dg+w+a +sd   v++
  EPX72165.1  97 PVRDIAYSTDGNWVAISSDETAVKL 121
                 499************9997776665 PP

  == domain 4  score: 7.0 bits;  conditional E-value: 0.006
                 EEEEETTSSEEEEEETTSEEEEEE CS
        WD40  15 slafspdgawlasGsdDgtvriWd 38 
                 +++fsp+ ++la +s +g ++++d
  EPX72165.1 142 HVSFSPNEKFLAISSCNGILYFYD 165
                 678********96665***99998 PP

  == domain 5  score: 20.7 bits;  conditional E-value: 2.8e-07
                 S.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  10 H.ssvtslafspdgawlasGsdDgtvriWd 38 
                   ss+t++a+s++g++la++ +D  + iWd
  EPX72165.1 229 NySSITDVAWSSNGRFLAASFRDSGILIWD 258
                 4468**************9999*******9 PP

  == domain 6  score: 0.4 bits;  conditional E-value: 0.72
                 SS.SSEEEEEEETTSSEE CS
        WD40   9 GH.ssvtslafspdgawl 25 
                  H ++v sla++p  + l
  EPX72165.1 268 HHyQNVVSLAWQPFANVL 285
                 3577799*****998876 PP

  == domain 7  score: -1.5 bits;  conditional E-value: 2.9
                 SEEEEEETTSEEEEE CS
        WD40  23 awlasGsdDgtvriW 37 
                 + ++ ++  g vri+
  EPX72165.1 533 NVIVVCTTSGYVRIY 547
                 335557669999998 PP

>> Coatomer_WDAD  Coatomer WD associated region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.012        23     123     175 ..      72     126 ..      33     130 .. 0.78
   2 !   15.0   0.9     5e-06    0.0099      24     165 ..     129     291 ..     116     300 .. 0.81

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.012
                    XXXX.XXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Coatomer_WDAD 123 ksegsvsfYDweqg...klvrridvkkvknVvwsddgelvalvskdtvyilsynle 175
                    +++ ++++Y +++    +l++r ++  v+++  s dg+ va+ s++t + l  ++e
     EPX72165.1  72 SEDATICVYPINNSsehTLLARTTLP-VRDIAYSTDGNWVAISSDETAVKLVNTKE 126
                    45567888888765111567777776.8***************9999988877766 PP

  == domain 2  score: 15.0 bits;  conditional E-value: 5e-06
                    XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX............XXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXX.XXXXXXXXXXX CS
  Coatomer_WDAD  24 qlkelgsieiypqslshnpngrfvlV.cgdgeyiiyt............alalrnkaygkgldfvwvs.snrfavlessksvkifknfkekktksi 105
                    q+ +l  +++  +++s++pn++f+++   +g   +y             ++   +   +  ++++w +  + fav +s+++v+++   +     ++
     EPX72165.1 129 QIHSLRPSKTSNKHVSFSPNEKFLAIsSCNGILYFYDaqsrnlvkfltnTILSVEGDSDLTSKAIWHPfDGTFAVADSENQVSVISTDDWLALYKL 224
                    45556666666899************95666777777777777779988444445555556678********************876666667899 PP

                    XXXXXXXXXXX......XXXXXXX.XXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Coatomer_WDAD 106 kleyqvdkifg......GalLgvk.segsvsfYDweqgklvrridvkkvknVvwsddgelvalvskd 165
                    +++++ ++i+       G  L ++  ++++ ++D  ++++v++ + ++v    w++  +++ +++++
     EPX72165.1 225 SPKENYSSITDvawssnGRFLAASfRDSGILIWDTYSKEIVSEHHYQNVVSLAWQPFANVLSFTTNQ 291
                    9********99999*******98734557*************************9988888877765 PP

>> RAB3GAP2_N  Rab3 GTPase-activating protein regulatory subunit N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0     0.033        65      56     101 ..     126     174 ..      99     217 .. 0.75
   2 !   12.7   0.0   2.8e-05     0.056      61      95 ..     516     551 ..     507     562 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.033
  RAB3GAP2_N  56 iItailclplss..kssqg.spdwtviavGlssGylrfytengelLlsq 101
                 + t+i  l  s+  +++ + sp+++ +a+   +G+l+fy+ +   L++ 
  EPX72165.1 126 ELTQIHSLRPSKtsNKHVSfSPNEKFLAISSCNGILYFYDAQSRNLVKF 174
                 3555555555554222223588899999999999999999998888765 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 2.8e-05
  RAB3GAP2_N  61 lclplsskssqg.spdwtviavGlssGylrfyteng 95 
                 l+lp++++s  +    ++vi+v ++sGy+r+y+ +g
  EPX72165.1 516 LMLPMEDESPVSiTLSSNVIVVCTTSGYVRIYSRTG 551
                 6788888666666999*****************999 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.6   0.0    0.0067        13      47     139 ..      83     173 ..      64     187 .. 0.74
   2 !    9.0   0.1   0.00059       1.2     104     156 ..     234     283 ..     189     293 .. 0.77

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0067
                 TT--EEECCEESSS.EEEEEE-TTSS-EEEEESSSSCEEEEEECS.CEEEEEEEEES.--.EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEE CS
       eIF2A  47 kkkksevvelkkegpihdvaWspkskefaviyGkmpakvslfdlk.vkviskleeqk.rN.tiffspkgklvllaGfgnlaGeleiwdvkkkkkia 139
                 ++++++++  +++ p+ d+a+s++++  a+     +  v+l ++k + +i++l+ +k  N  + fsp++k+++++     +G l ++d ++++ ++
  EPX72165.1  83 NNSSEHTLLARTTLPVRDIAYSTDGNWVAISS--DETAVKLVNTKeLTQIHSLRPSKtSNkHVSFSPNEKFLAISS---CNGILYFYDAQSRNLVK 173
                 55566666667777899999999998877754..445788888866999999975441342799*******99875...67779999999887766 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00059
                 -EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-TT--EEEE-TTSS CS
       eIF2A 104 NtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakaeaanatlvewspdgr 156
                   + +s++g+++  a f++    + iwd+ +k+ +++ + +n +++ w+p  +
  EPX72165.1 234 TDVAWSSNGRFL-AASFRDS--GILIWDTYSKEIVSEHHYQNVVSLAWQPFAN 283
                 468999999986.589*998..688***********************99765 PP

>> Cytochrom_D1  Cytochrome D1 heme domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0    0.0016       3.2     284     355 ..     110     176 ..      97     184 .. 0.84
   2 ?    4.5   0.0    0.0053        10     292     351 ..     207     265 ..     186     272 .. 0.54

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0016
                   EE-TT-SSHT-EEEEETTBT-EEE-HHHHHT--EEEEEE-TTSSEEEEEEE--SSEEEEEETTTTEEEEEEE CS
  Cytochrom_D1 284 vdaflnpdndsvaviDkktlekvltlaesaglkvvhvEfnkdGdevwlSvwdgkdalvvyDdktlklkkvik 355
                   v   +  d+ +v+++ +k+l+++++l++s   +  hv f+ + + + +S  +g   l  yD+++++l+k ++
    EPX72165.1 110 VA--ISSDETAVKLVNTKELTQIHSLRPSKT-SNKHVSFSPNEKFLAISSCNG--ILYFYDAQSRNLVKFLT 176
                   44..6788999*****************988.789****99876666666665..5***********99886 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.0053
                   HT-EEEEETTBT-EEE-HHHHHT--.EEEEEE-TTSSEEEEEEE--SSEEEEEETTTTEEE CS
  Cytochrom_D1 292 ndsvaviDkktlekvltlaesaglk.vvhvEfnkdGdevwlSvwdgkdalvvyDdktlklk 351
                   +++v vi + +     +l ++ + + ++ v ++++G+ +  S +d+   + ++D ++ + +
    EPX72165.1 207 ENQVSVISTDDWLALYKLSPKENYSsITDVAWSSNGRFLAASFRDSG--ILIWDTYSKEIV 265
                   44455555555544444444444334555555555555555555555..555555554433 PP

>> PD40  WD40-like Beta Propeller Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.0    0.0028       5.6      13      30 ..     100     117 ..      94     121 .. 0.90
   2 ?   -1.1   0.0         1     2e+03      15      27 ..     144     156 ..     140     156 .. 0.91
   3 ?    2.3   0.2     0.083   1.7e+02      11      24 ..     233     246 ..     226     257 .. 0.75

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0028
                 EEEE-TTSSEEEEEEECT CS
        PD40  13 aPsfSPDGkrlaFsSdRg 30 
                 ++++S DG++ a+sSd +
  EPX72165.1 100 DIAYSTDGNWVAISSDET 117
                 5799************76 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 1
                 EE-TTSSEEEEEE CS
        PD40  15 sfSPDGkrlaFsS 27 
                 sfSP+ k la+sS
  EPX72165.1 144 SFSPNEKFLAISS 156
                 8********9998 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.083
                 EEEEEE-TTSSEEE CS
        PD40  11 egaPsfSPDGkrla 24 
                 +++ ++S +G+ la
  EPX72165.1 233 ITDVAWSSNGRFLA 246
                 78889*****8776 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.6   3.3e+03      13      73 ..      26      85 ..      20      91 .. 0.59
   2 ?   10.4   0.1   0.00014      0.29       5     186 ..     100     298 ..      96     309 .. 0.81
   3 ?   -2.2   0.0         1     2e+03      51      65 ..     530     544 ..     521     553 .. 0.59

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.6
   WD40_like 13 slilyGgkddkctvlkleslesvsivesfedSvifvklldddlilvvtlDGtillsllene 73
                +++l  g +  ++ +++ s+e+  ++++ +d +  +  +++ ++  ++ D ti  + ++n+
  EPX72165.1 26 TYLLTVGSNLVIRKFQVGSDEEPESIDNHQDPITGI-AVSKTHFCTCSEDATICVYPINNS 85
                555555555555555666666666666666666544.345566666777777766666665 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00014
   WD40_like   5 sidiskkgslilyGgkddkctvlkleslesvsivesfedSvifvklldddlil.vvtlDGtillsllenee.......evenekieedis...tvkvid 92 
                  i +s +g+ ++  +++  +++++++ l+++ ++   + S  +v +  ++++l + +  G +  ++ +  +       ++ + + + d++   + +  d
  EPX72165.1 100 DIAYSTDGNWVAISSDETAVKLVNTKELTQIHSLRPSKTSNKHVSFSPNEKFLaISSCNGILYFYDAQSRNlvkfltnTILSVEGDSDLTskaIWHPFD 198
                 68899*********************************************998356789*999888887775555444555566677776222356789 PP

   WD40_like  93 dklliGtnkGsiyvfskd..lqleevl.lgqsseIkeikiennkiy...sLsesafivfdlfsqnieykisvkdiktfeiienkdilligtegeililk 185
                 + +++  ++ ++ v s d  l l ++     +s I ++  ++n  +   s  +s  +++d +s++i  + +++++ ++   ++ ++l  +t++ +l  +
  EPX72165.1 199 GTFAVADSENQVSVISTDdwLALYKLSpKENYSSITDVAWSSNGRFlaaSFRDSGILIWDTYSKEIVSEHHYQNVVSLAWQPFANVLSFTTNQGVLYNC 297
                 9*************9999333333333145789*****99888666455788999***********************************999888766 PP

   WD40_like 186 k 186
                  
  EPX72165.1 298 P 298
                 5 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 1
   WD40_like  51 ldddlilvvtlDGti 65 
                 l+ ++i+v+t  G++
  EPX72165.1 530 LSSNVIVVCTTSGYV 544
                 344444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (819 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       652  (0.0363657); expected 358.6 (0.02)
Passed bias filter:                      534  (0.0297841); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.80u 0.28s 00:00:01.08 Elapsed: 00:00:00.49
# Mc/sec: 5077.46
//
Query:       EPX72166.1  [L=162]
Description: fungal family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.8e-15   55.8  11.2    7.7e-15   55.7  11.2    1.1  1  DUF3245    Protein of unknown function (DUF3245)
  ------ inclusion threshold ------
       0.02   15.3   0.0        1.5    9.3   0.0    2.2  2  nlz1       NocA-like zinc-finger protein 1
      0.079   13.1   1.6       0.12   12.5   0.0    2.1  2  G-patch_2  G-patch domain
       0.17   12.2   9.3       0.14   12.6   7.0    1.8  2  PBP1_TM    Transmembrane domain of transglycosylase PBP1 at N
       0.31   10.8   6.4       0.34   10.7   6.4    1.1  1  RR_TM4-6   Ryanodine Receptor TM 4-6


Domain annotation for each model (and alignments):
>> DUF3245  Protein of unknown function (DUF3245)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.7  11.2   2.1e-18   7.7e-15       2     145 ..      14     145 ..      13     162 .] 0.73

  Alignments for each domain:
  == domain 1  score: 55.7 bits;  conditional E-value: 2.1e-18
     DUF3245   2 anvalarsqkLvasWlpketaeeqsdekktdeelqkeedeiftavpetlGlGAklptkaadg..swnreelds.....ndklrrqllgKnykkvmaeke 93 
                 ++ ++  s+kL++sWl++ +++ ++d+ +++ +lq        a+p +lGlGA  ++++     ++++e+++s      ++++rql++K       e  
  EPX72166.1  14 FQASIGVSRKLINSWLGEGSQSIDDDSTNDNTNLQ--------ARPTRLGLGATAKESSTSPqvAFKNERMKSlpaalRKNIERQLQKK-------EPV 97 
                 5678999********************99999999........***********99998876679*********9999999******99.......444 PP

     DUF3245  94 kaeakkpvnaskrkaakvkkeakekakeakdddddddedesRskavgkksss 145
                 k +++++  ++krk+   + + k k+ ++ d+++d+de +sR ++++k + +
  EPX72166.1  98 KTNGEQS--PQKRKRETDE-KGKLKEDDVADESEDEDE-DSRIQVANKSKRN 145
                 4454444..4555554422.233333334455554444.6999999987766 PP

>> nlz1  NocA-like zinc-finger protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.0   0.00041       1.5      30      49 ..       4      23 ..       1      29 [. 0.84
   2 ?    4.0   0.0      0.02        70      42      55 ..      52      67 ..      35      69 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00041
        nlz1 30 tKsssLvgaqlaaslGvsGk 49
                 K +s++++q+ as+Gvs k
  EPX72166.1  4 EKDASVLSNQFQASIGVSRK 23
                68899************966 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.02
        nlz1 42 a..slGvsGkkagsSP 55
                +  +lG + k++++SP
  EPX72166.1 52 TrlGLGATAKESSTSP 67
                14589**********9 PP

>> G-patch_2  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   3.3e-05      0.12      36      60 ..      39      61 ..      28      62 .. 0.74
   2 ?   -1.2   0.6      0.61   2.2e+03      34      34 ..     116     116 ..      88     153 .. 0.64

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 3.3e-05
   G-patch_2 36 nkkgrvkpeepkrRpgrlGLGakpa 60
                +  ++ +    + Rp+rlGLGa+++
  EPX72166.1 39 D--STNDNTNLQARPTRLGLGATAK 61
                3..345678899**********986 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.61
   G-patch_2  34 g 34 
                 g
  EPX72166.1 116 G 116
                 1 PP

>> PBP1_TM  Transmembrane domain of transglycosylase PBP1 at N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.72   2.6e+03      44      54 ..      37      47 ..      30      66 .. 0.57
   2 ?   12.6   7.0   3.8e-05      0.14       6      58 ..      94     141 ..      90     156 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.72
     PBP1_TM 44 dDdddddeeee 54
                dDd  +d+ + 
  EPX72166.1 37 DDDSTNDNTNL 47
                44444444333 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 3.8e-05
     PBP1_TM   6 RePiGRkGkkakakparkkasrrrrrdddyddeyddeedDdddddeeeevprk 58 
                 +eP+   G ++ +k +r++ ++ + ++dd  de +de +     d   +v+ k
  EPX72166.1  94 KEPVKTNGEQSPQKRKRETDEKGKLKEDDVADESEDEDE-----DSRIQVANK 141
                 699999999999999999999999999998884444333.....333334444 PP

>> RR_TM4-6  Ryanodine Receptor TM 4-6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   6.4   9.6e-05      0.34      56     159 ..      42     150 ..      13     161 .. 0.51

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 9.6e-05
                 XXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXX..........XXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXX..........XXXXXXX CS
    RR_TM4-6  56 ggqykvvakkseagLgDlseteaeesptpelkkkla..........eeeeaeeekeeeeepeaeaeekadaengekeekekekeeeekeseeeeeekkk 144
                 + +++++a+ +  gLg   ++++++++ + ++++++          e++ +++e  + ++ e+++ +k+++e+ ek +    ke++  +++e+e e + 
  EPX72166.1  42 NDNTNLQARPTRLGLGATAKESSTSPQVAFKNERMKslpaalrkniERQLQKKEPVK-TNGEQSP-QKRKRETDEKGK---LKEDDVADESEDEDEDSR 135
                 334466667777788888888887777654445444344444322232222222222.2222222.233333444333...333344444444444443 PP

                 XXXXXXXXXXXXXXX CS
    RR_TM4-6 145 kkkakskkkeeaeae 159
                  + a+++k + ++ +
  EPX72166.1 136 IQVANKSKRNINQGS 150
                 444444454444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1699  (0.0947627); expected 358.6 (0.02)
Passed bias filter:                      605  (0.0337442); expected 358.6 (0.02)
Passed Vit filter:                        67  (0.00373696); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.89
# Mc/sec: 551.63
//
Query:       EPX72167.1  [L=108]
Description: BC10 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.6e-14   52.7   6.7    5.2e-14   52.2   6.7    1.3  1  BC10      Bladder cancer-related protein BC10


Domain annotation for each model (and alignments):
>> BC10  Bladder cancer-related protein BC10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.2   6.7   2.9e-18   5.2e-14       1      64 [.       1      55 [.       1      56 [. 0.97

  Alignments for each domain:
  == domain 1  score: 52.2 bits;  conditional E-value: 2.9e-18
        BC10  1 MfcLrflipvlllpvrsnrslvnaselfiv.lfligftvelkPcvycsiilgllikaicrpnlsd 64
                M+cLr++ip+ll++        na+++ ++ +f++ ++++++Pc+yc+iil +l+++  r+++sd
  EPX72167.1  1 MLCLRYFIPMLLVA--------NAAPYVFYpVFILATIARKYPCPYCMIILAILVNT--RSLWSD 55
                **************........********99*************************..****98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       353  (0.0196888); expected 358.6 (0.02)
Passed bias filter:                      260  (0.0145016); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.43
# Mc/sec: 749.85
//
Query:       EPX72168.1  [L=251]
Description: hypothetical protein SOCG_04861 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (251 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       978  (0.0545485); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1775.04
//
Query:       EPX72169.1  [L=441]
Description: hypothetical protein SOCG_04862 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.085   13.4   0.3       0.38   11.3   0.1    2.1  2  DUF2718   Protein of unknown function (DUF2718)


Domain annotation for each model (and alignments):
>> DUF2718  Protein of unknown function (DUF2718)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   2.1e-05      0.38      22      70 ..      84     135 ..      70     176 .. 0.70
   2 ?   -1.0   0.0      0.13   2.3e+03      18      38 ..     305     325 ..     297     374 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 2.1e-05
     DUF2718  22 lmypl.kklisflfGelnpfndvlpdpkkdddavivpdd..lppepkekike 70 
                  m+ l +k  s+l+G ln  ++   +pkkdd +++  +   +    k + k+
  EPX72169.1  84 FMFDLeNKHDSYLYGYLNGTEEEVTNPKKDDSQTLEIHSgkTISATKTENKD 135
                 5777635888*********************998743331222223333333 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.13
     DUF2718  18 lysllmyplkklisflfGeln 38 
                 ++++ ++ +++l  f++ ++ 
  EPX72169.1 305 IFNIELFRMQHLQHFIMKDIR 325
                 667777777777777666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (441 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       606  (0.0338); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 3202.23
//
Query:       EPX72170.1  [L=688]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.3e-56  183.9   7.0    3.6e-07   29.5   0.1    8.3  8  PUF           Pumilio-family RNA binding repeat
    0.00098   19.1   0.2      0.012   15.7   0.0    2.5  2  YqzH          YqzH-like protein
  ------ inclusion threshold ------
      0.073   12.4   0.0        3.9    6.8   0.1    2.2  2  Arena_ncap_C  Arenavirus nucleocapsid C-terminal domain
       0.13   12.0   0.0       0.23   11.2   0.0    1.3  1  XRN1_D1       Exoribonuclease Xrn1 D1 domain


Domain annotation for each model (and alignments):
>> PUF  Pumilio-family RNA binding repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.0   1.4e-08   6.4e-05       3      27 ..     367     391 ..     365     396 .. 0.88
   2 !   25.0   0.0   2.1e-09   9.5e-06       3      31 ..     403     431 ..     401     435 .. 0.83
   3 !   12.9   0.0   1.5e-05     0.065       2      26 ..     438     463 ..     437     469 .. 0.85
   4 !   29.5   0.1     8e-11   3.6e-07       2      35 .]     475     508 ..     474     508 .. 0.95
   5 !   29.4   0.0   8.7e-11   3.9e-07       8      34 ..     517     543 ..     516     544 .. 0.92
   6 !   21.5   0.0   2.8e-08   0.00012       2      28 ..     547     573 ..     547     580 .. 0.86
   7 !   16.9   0.0     8e-07    0.0036       3      32 ..     584     613 ..     583     616 .. 0.83
   8 !   21.6   0.0   2.5e-08   0.00011       5      33 ..     624     652 ..     622     654 .. 0.89

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 1.4e-08
                 GGGHHHHHTSTTHHHHHHHHHHHSC CS
         PUF   3 kgnlvqLstdqyGnyvvQkllehat 27 
                 ++n+++ ++dq+G++ +Q+lle+  
  EPX72170.1 367 SNNILSFCKDQHGCRYLQRLLEKKN 391
                 689*******************844 PP

  == domain 2  score: 25.0 bits;  conditional E-value: 2.1e-09
                 GGGHHHHHTSTTHHHHHHHHHHHSCHHHH CS
         PUF   3 kgnlvqLstdqyGnyvvQkllehateeqk 31 
                 + +l +L++d +Gny++Qkl+eh +  q+
  EPX72170.1 403 QAYLPVLMVDAFGNYLCQKLFEHVSDAQR 431
                 67999*****************9666655 PP

  == domain 3  score: 12.9 bits;  conditional E-value: 1.5e-05
                 HGGGHHHHHTSTTHHHHHHHHHHH.S CS
         PUF   2 ikgnlvqLstdqyGnyvvQklleh.a 26 
                 i ++lv +s + +G++++Qk+++  +
  EPX72170.1 438 IAPKLVPISFNMHGTRALQKIIDLvS 463
                 5689999***************9644 PP

  == domain 4  score: 29.5 bits;  conditional E-value: 8e-11
                 HGGGHHHHHTSTTHHHHHHHHHHHSCHHHHHHHH CS
         PUF   2 ikgnlvqLstdqyGnyvvQkllehateeqkklil 35 
                 +++n+v L +d +Gn+v+Qk+l +++ e++++i+
  EPX72170.1 475 LRPNVVMLTKDLNGNHVIQKCLNRFSHEDCQFIF 508
                 679999**************************97 PP

  == domain 5  score: 29.4 bits;  conditional E-value: 8.7e-11
                 HHHTSTTHHHHHHHHHHHSCHHHHHHH CS
         PUF   8 qLstdqyGnyvvQkllehateeqkkli 34 
                 + st+++G++vvQ++++ha++ q++++
  EPX72170.1 517 DVSTHRHGCCVVQRCFDHASPAQIEQL 543
                 579*********************997 PP

  == domain 6  score: 21.5 bits;  conditional E-value: 2.8e-08
                 HGGGHHHHHTSTTHHHHHHHHHHHSCH CS
         PUF   2 ikgnlvqLstdqyGnyvvQkllehate 28 
                 i+++ + L++d +Gnyv+Q++le + +
  EPX72170.1 547 IIPHALLLVQDAFGNYVLQYVLELNNP 573
                 789********************7666 PP

  == domain 7  score: 16.9 bits;  conditional E-value: 8e-07
                 GGGHHHHHTSTTHHHHHHHHHHHSCHHHHH CS
         PUF   3 kgnlvqLstdqyGnyvvQkllehateeqkk 32 
                 + ++ +Lst ++ ++v++k++ +++ + k+
  EPX72170.1 584 ISKVRVLSTQKFSSNVIEKCIFYSPFPLKE 613
                 568899***************987776666 PP

  == domain 8  score: 21.6 bits;  conditional E-value: 2.5e-08
                 GHHHHHTSTTHHHHHHHHHHHSCHHHHHH CS
         PUF   5 nlvqLstdqyGnyvvQkllehateeqkkl 33 
                 +l ++ +d ++nyv+Q+ l+ a+++q+++
  EPX72170.1 624 FLAKMLKDSFANYVIQTALDNADPKQRMK 652
                 667899********************976 PP

>> YqzH  YqzH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.17   7.7e+02       9      23 ..     491     504 ..     489     509 .. 0.81
   2 !   15.7   0.0   2.6e-06     0.012       1      39 [.     620     658 ..     620     663 .. 0.94

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.17
        YqzH   9 mirkclrqYgrdtel 23 
                  i+kcl++++++ ++
  EPX72170.1 491 VIQKCLNRFSHE-DC 504
                 599*******98.55 PP

  == domain 2  score: 15.7 bits;  conditional E-value: 2.6e-06
        YqzH   1 MdekfieKmirkclrqYgrdtelmplseeeqkeLveriq 39 
                 Mdekf+ Km++ ++ +Y  +t+l+   ++   +L eri+
  EPX72170.1 620 MDEKFLAKMLKDSFANYVIQTALDNADPKQRMKLAERIK 658
                 ************************999999999999996 PP

>> Arena_ncap_C  Arenavirus nucleocapsid C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.011        48      77     150 ..     350     425 ..     344     447 .. 0.75
   2 ?    6.8   0.1   0.00087       3.9      76     120 ..     461     507 ..     446     522 .. 0.79

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.011
                   TTB-TTHHHHHHH.HS-TT-EEE.ESSHHHHHHHHHHTT-TTSEEEE-B--HHHHTTTHHHHHHHHG.GG---B-S- CS
  Arena_ncap_C  77 fdaqpgllsavig.alprnmvit.cqgsddirklldsqgrkdiklidvkltkedsrkyedkvwdkyg.dlckmhtgv 150
                    +aqp + s+v    +p n +++ c+     r l    ++k+   +dv + ++++      + d +g +lc++    
    EPX72170.1 350 ANAQPAVSSTVAPfSFPSNNILSfCKDQHGCRYLQRLLEKKNPAYVDVVFNETQAYLPVL-MVDAFGnYLCQKLFEH 425
                   689*******987358998888758899999999999999**********9999865443.4466652577665554 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.00087
                   GTTB-TTHHHHHHHHS-TT-EEEES...SHHHHHHHHHHTT-TTSEEE CS
  Arena_ncap_C  76 lfdaqpgllsavigalprnmvitcq...gsddirklldsqgrkdikli 120
                   l  + pg +s +++al +n+v+ ++   g   i+k l+  +  d ++i
    EPX72170.1 461 LV-SSPGQVSCIVDALRPNVVMLTKdlnGNHVIQKCLNRFSHEDCQFI 507
                   33.57**************999774333899999*9999999998877 PP

>> XRN1_D1  Exoribonuclease Xrn1 D1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   5.1e-05      0.23      37     125 ..     571     658 ..     564     663 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 5.1e-05
                 SS--SS-EEEEEE--------HHHHHHHHBTSEEEESGGG.-EEEEEEEEE-SS-EEEEE-..SSSEEEEEE--THHHHHHHHHHHHHHH CS
     XRN1_D1  37 qqeSrneSmvvtiedkeenlkleelakeklgkrvfvgyPf.LrEakvvavsdelfkyekelleekkkkvvsrphsekekkefkkkaerie 125
                 +++S  e++v +   k   l+++++++++++k +f + Pf L+E  + +++de+f  +  l+++  + v+++ +++ + k+  k aeri+
  EPX72170.1 571 NNPSHTETIVNHFISKVRVLSTQKFSSNVIEKCIFYS-PFpLKEKLIDELMDEKFLAK-MLKDSFANYVIQTALDNADPKQRMKLAERIK 658
                 679999******999*******************987.444**************999.4557778899999999999999999999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (688 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       493  (0.0274974); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.41
# Mc/sec: 4998.18
//
Query:       EPX72171.1  [L=132]
Description: bouquet formation protein Bqt1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       481  (0.026828); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.22s 00:00:00.59 Elapsed: 00:00:00.37
# Mc/sec: 1076.99
//
Query:       EPX72172.1  [L=562]
Description: chs five like protein Cfr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      1e-35  121.7   0.3    1.9e-35  120.8   0.3    1.5  1  fn3_2      Fibronectin type III domain
      1e-23   83.0   0.1    1.7e-23   82.3   0.1    1.4  1  CHS5_N     Chitin biosynthesis protein CHS5 N-terminus
    2.2e-07   30.7   0.0    3.8e-07   29.9   0.0    1.4  1  PTCB-BRCT  twin BRCT domain
    2.4e-06   27.8   0.0      5e-06   26.8   0.0    1.5  1  BRCT       BRCA1 C Terminus (BRCT) domain
    3.6e-06   27.1   0.0    1.2e-05   25.4   0.0    1.9  1  DUF3006    Protein of unknown function (DUF3006)


Domain annotation for each model (and alignments):
>> fn3_2  Fibronectin type III domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.8   0.3   5.3e-39   1.9e-35       2      89 .]      79     166 ..      78     166 .. 0.99

  Alignments for each domain:
  == domain 1  score: 120.8 bits;  conditional E-value: 5.3e-39
       fn3_2   2 kPkaPvlkvknvtqtsvvleWdklelataklksLslykngqrlgkipnplkntstKlsgLsvdteyefqlvlkttaGtyksekikvrt 89 
                  P+aPvl+v+nvtqts+vleWd l+l+t++lksL lykn+ r+ ki+n l+++++KlsgLs+dt+y+f+lvl+ttaG+++s++++v+t
  EPX72172.1  79 LPSAPVLRVRNVTQTSIVLEWDALQLGTSRLKSLCLYKNNIRALKITNLLSTQHAKLSGLSLDTDYDFTLVLDTTAGRFSSKHLQVKT 166
                 69************************************************************************************98 PP

>> CHS5_N  Chitin biosynthesis protein CHS5 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.3   0.1   4.7e-27   1.7e-23       1      48 []       6      53 ..       6      53 .. 0.97

  Alignments for each domain:
  == domain 1  score: 82.3 bits;  conditional E-value: 4.7e-27
      CHS5_N  1 evtftvGKlDAglAiLltedahliEFPsvLLPegveaGSivdisvsrn 48
                +++++v+K+DAg+AiL+t+++h+iEFPsvLLPe+v+aGSivd+sv +n
  EPX72172.1  6 QFMVSVAKIDAGMAILITPSFHIIEFPSVLLPENVKAGSIVDMSVRHN 53
                6899*****************************************998 PP

>> PTCB-BRCT  twin BRCT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.9   0.0   1.1e-10   3.8e-07       2      62 ..     176     237 ..     175     238 .. 0.92

  Alignments for each domain:
  == domain 1  score: 29.9 bits;  conditional E-value: 1.1e-10
                 EEEEECB-TTCHHHHHHHHHHTT-EEESSE.ETT-SEEEECSS-CHHHHHHHHCT-EEE-CH CS
   PTCB-BRCT   2 vicvtgysgddrkslqklieamGaeyskdl.tksvTHLicksgeGekyekAkkwgipvVsve 62 
                  +cv ++ +++ + lqk ie++ a+  ++  + ++TH+ic s  G+ y++Ak+ +ipv  v+
  EPX72172.1 176 QVCVGNMVPEEMQALQKCIERIHAKPIQTSvQIDTTHFICSSVGGREYDRAKTANIPVLGVD 237
                 58**********************9666666***************************9887 PP

>> BRCT  BRCA1 C Terminus (BRCT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.0   1.4e-09     5e-06       6      78 ..     172     242 ..     168     243 .. 0.95

  Alignments for each domain:
  == domain 1  score: 26.8 bits;  conditional E-value: 1.4e-09
                 TTTEEEEEEESTSSHHHHHHHHHHHHTTCEE.ESSCSTTSSEEEESSSHSHHHHHHHHHHTTSEEEETHHHHHH CS
        BRCT   6 fhgckfvitgvldnftrdeleelikehGGkv.ttevskktthlvvgepesrslkylealklnipivheewlldc 78 
                 ++g+++++ g++  ++ + l+++i+   +k  +t+v  +tth+++++   ++ +y  a+  nip++  ++ll+c
  EPX72172.1 172 LTGIQVCV-GNMVPEEMQALQKCIERIHAKPiQTSVQIDTTHFICSSV--GGREYDRAKTANIPVLGVDYLLKC 242
                 78999***.99999999999**********77****************..99*********************9 PP

>> DUF3006  Protein of unknown function (DUF3006)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.0   3.3e-09   1.2e-05       5      65 ..      13      70 ..       9      71 .. 0.93

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 3.3e-09
     DUF3006  5 RfEgdlAVleledgetidiprsdLpegakeGdvLeieddeieldpeetekrkeriqelldr 65
                +++ ++A+l++   + i+ p  +Lpe++k G++++ +   +++++ee++ r+++ ++ +++
  EPX72172.1 13 KIDAGMAILITPSFHIIEFPSVLLPENVKAGSIVDMS---VRHNREEEASREKEFDDIQNE 70
                68999********99**********************...**************9998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (562 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1724  (0.0961571); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                       115  (0.00641419); expected 17.9 (0.001)
Passed Fwd filter:                        46  (0.00256568); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.30u 0.35s 00:00:01.65 Elapsed: 00:00:00.51
# Mc/sec: 3312.69
//
Query:       EPX72173.1  [L=121]
Description: SNAP receptor, synaptobrevin family [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.9e-33  114.1   0.9    2.1e-33  113.9   0.9    1.0  1  Synaptobrevin  Synaptobrevin


Domain annotation for each model (and alignments):
>> Synaptobrevin  Synaptobrevin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.9   0.9   1.2e-37   2.1e-33       4      87 ..      31     114 ..      28     116 .. 0.97

  Alignments for each domain:
  == domain 1  score: 113.9 bits;  conditional E-value: 1.2e-37
                    HHHHHHHHHHCCCCHHCCHHHHCHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHTXXXXXXXXXXXXXXXXXXXXXX CS
  Synaptobrevin   4 klakikaevdevkdimkeNidkvlergekldeLvdktenLqssaqqFkkqarklkrkmwwknmkliiililvvlililiiiivi 87 
                    k+a+i++++d++++im+eNi kv erge+ld+L+dkt+nL+ saq F++ a+++++kmwwk+m++++++i+ ++il+++ii++i
     EPX72173.1  31 KTAAIQQQIDDTVGIMRENISKVSERGERLDSLQDKTDNLAVSAQGFRRGANRVRKKMWWKDMRMRLCIIIGIIILLVVIIVPI 114
                    7899*****************************************************************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1181  (0.0658709); expected 358.6 (0.02)
Passed bias filter:                      883  (0.0492498); expected 358.6 (0.02)
Passed Vit filter:                        95  (0.00529868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 959.25
//
Query:       EPX72174.1  [L=1689]
Description: ATP-dependent 5' to 3' DNA/RNA helicase Sen1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.8e-74  250.8   0.5    1.8e-74  250.8   0.5    1.8  1  AAA_11           AAA domain
    1.7e-64  217.1   2.9    2.3e-64  216.7   0.7    2.3  2  AAA_12           AAA domain
    3.7e-33  114.8  21.0    8.4e-23   80.5  10.3    2.3  2  SEN1_N           SEN1 N terminal
    1.9e-08   34.8   0.0    9.4e-08   32.5   0.0    2.2  1  AAA_19           AAA domain
    4.6e-08   33.0   0.0    0.00046   19.9   0.0    2.5  2  AAA_30           AAA domain
      2e-07   31.0   1.4    0.00052   19.8   0.0    4.0  3  Viral_helicase1  Viral (Superfamily 1) RNA helicase
  ------ inclusion threshold ------
      0.013   15.4   0.1       0.48   10.3   0.0    2.8  2  Helicase_RecD    Helicase
      0.031   14.1   0.0      0.068   13.0   0.0    1.6  1  UvrD_C_2         UvrD-like helicase C-terminal domain
       0.11   12.3   0.0       0.29   10.9   0.0    1.7  1  MukB             MukB N-terminal
       0.13   12.5   0.7        2.3    8.5   0.0    3.0  2  AAA_22           AAA domain
       0.17   12.3   0.3        1.1    9.7   0.0    2.4  2  AAA              ATPase family associated with various cellul
       0.18   11.7   0.0       0.65    9.9   0.0    1.9  2  Cyanate_lyase    Cyanate lyase C-terminal domain
       0.22   11.9   6.0       0.08   13.3   1.3    2.4  2  CPSase_L_D3      Carbamoyl-phosphate synthetase large chain, 
       0.71    9.8   6.0        0.8    9.7   0.7    3.7  3  ResIII           Type III restriction enzyme, res subunit


Domain annotation for each model (and alignments):
>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  250.8   0.5   1.4e-77   1.8e-74       1     260 [.    1133    1418 ..    1133    1419 .. 0.93

  Alignments for each domain:
  == domain 1  score: 250.8 bits;  conditional E-value: 1.4e-77
      AAA_11    1 klndsqreaiksalseseitliqGPPGtgKTktivellsqll........srrk...seeeksakpriLvCapSNaAvDellerllrglldsegeky 86  
                  ++n+ q++ai s l +s++tliqGPPGtgKTkti++++ +ll        s  +   ++ + ++k+++L+CapSNaAvDe+l+rl rg+  s+ge+y
  EPX72174.1 1133 QVNSPQAQAILSSLDNSGFTLIQGPPGTGKTKTIIGIITALLvdlnryhiS--RpggQSSSTEPKQQMLLCAPSNAAVDEVLLRLKRGFTLSNGEHY 1227
                  579**************************************9777553331..134577899*********************************** PP

      AAA_11   87 kpkivRvgneeeriseavksvsleekvekrlekee..................kaqlakeiskeleklakelrafeeeeekeklkkskekskskleq 165 
                   pk+vR+gn+e +i+ av++ sle+++ek+l + +                    ++ ++i++ +++++ + + +e++++  + ++++ ++k+ +eq
  EPX72174.1 1228 VPKVVRIGNPE-TINVAVRDTSLEYQTEKQLLEVNqgavdlgslqeltrwrdvFYNCIQKIEDLEKQIDVARDMEEDTKALGQDLQNSINEKNLAEQ 1323
                  ***********.9*****************988779************99999778888888888888887777777777799999*********** PP

      AAA_11  166 errklkkerkelskeleeaeesleeevldeaeivltTlsgagsklleklakkfdvviIDEAaqavEpstliPlrlgakkvvLvGDpkQLpatvis 260 
                  + ++ ++++ + +ke++  ++++++ +l++a++v++Tlsg+g++l  +   +f +viIDEAaqavE+ t+iPlr+gakk++LvGDp+QLp+tv++
  EPX72174.1 1324 KIEEFQSQSFTKNKEVDHLRKKAQKAILKQADVVCATLSGSGHDLVAHSFLNFSTVIIDEAAQAVELDTIIPLRYGAKKCILVGDPNQLPPTVLN 1418
                  *********************************************************************************************87 PP

>> AAA_12  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1       1.4   1.8e+03      31      82 ..     916     983 ..     894    1005 .. 0.68
   2 !  216.7   0.7   1.8e-67   2.3e-64       1     198 [.    1426    1621 ..    1426    1622 .. 0.97

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 1.4
      AAA_12  31 srfpskl.fYkgkLkdaesvkkrele...............aqealeepleplvfidvekseeekekk 82 
                   fp++  fY++ L+ ++s +  +                  ++++ + l+p++f+++ ++ + ++k+
  EPX72174.1 916 RLFPNMSdFYSEILTWNPSYEAASPIlkyhtsegkiadtfrSIDQYMDVLQPMIFMECWSQIQATKKN 983
                 5566653377777777775554444455666677777777788999999999***9997666655553 PP

  == domain 2  score: 216.7 bits;  conditional E-value: 1.8e-67
      AAA_12    1 lerSlferllkkekekvvlLdtqYRmhpeIsrfpsklfYkgkLkdaesvkkreleaqealeepleplvfidvekseeekekkeksyiNeeEaelvvk 97  
                  +++Slf r++k ++e++ lL++qYRmhp+Is+fps++fY+++Lkd+e +++++++  ++ ++++ ++ ++d+ ++e  +++  +s +N eE+  vv+
  EPX72174.1 1426 YSQSLFVRIQKLHSEQMCLLSIQYRMHPHISYFPSMKFYDSRLKDGEGMAEKTKQ-VWHSNSQFDQYRLFDIRGQERISTT--SSSYNIEEVGYVVQ 1519
                  799****************************************************.9***************998888886..799*********** PP

      AAA_12   98 lvekllkkgsee.erkkigvitpYraqvellkkklkekeeeksekeievntvdgfQGrekdviilslVRsnekkeigflkderrlNValTRAkskli 193 
                  ++ekl++++++   + +igvitpYr+q++ l+k++kek+ ++  ++++++tvdgfQG+ekd+ii+s+V+s +k +igfl+d rrlNValTRA+s+l+
  EPX72174.1 1520 MYEKLVASFPDVnFTGRIGVITPYRQQLHELRKAFKEKFGKTIMSSVDIQTVDGFQGQEKDIIIFSCVKSYSKYSIGFLRDFRRLNVALTRARSSLF 1616
                  **********998889********************************************************************************* PP

      AAA_12  194 ivGnk 198 
                  ivGn 
  EPX72174.1 1617 IVGNL 1621
                  ***95 PP

>> SEN1_N  SEN1 N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.6   2.9   1.5e-13     2e-10       5     210 ..      54     243 ..      51     295 .. 0.84
   2 !   80.5  10.3   6.6e-26   8.4e-23     424     750 ..     397     694 ..     369     696 .. 0.88

  Alignments for each domain:
  == domain 1  score: 39.6 bits;  conditional E-value: 1.5e-13
      SEN1_N   5 leasLssCdkCvrafhrakkklrqrllerfpeekvaqffdildeweierilkgLekakellekrgivksssleaslaevllalyeaLccppllrsdpel 103
                  ++ L  C +C+++f+  +++ + ++  +++  ++a+++++ d+w +++ l ++++          v+++ l     +++  +y  +++p l+r+++  
  EPX72174.1  54 YNERLCGCTSCIQSFYNLRDEALAKYSYAYSGASMANLERRWDDWMVDTTLSNFKN----------VEETTL--DFTALPSLVYNVFLNPGLMRNQEVY 140
                 6889****************************************************..........233333..46778889999********999999 PP

      SEN1_N 104 ralfdkvfkslqskkkplklsellPGltyllfdgdeeerr.WAekqler.lkrsptkeefewavsdaleeaiehllrlqdpads..aierfWsglslil 198
                 r++++  ++++ +  ++ +   +lPG ++  f+++  e + +  + l+r     +t+e+f+ ++s +l + +++ + +          + fW++ s+++
  EPX72174.1 141 RQALSGFVDLVSD--WSSDT--FLPGFLVIFFEESYSEVHeYVINYLKRnENLHLTSEAFDDVFSIILYQQSDEESSSL----LspCTSDFWNRASTLF 231
                 9999999988875..86665..*************88888899999999778888999999999999999886666633....133589********** PP

      SEN1_N 199 rlldkelitesl 210
                 +ll+ + +t+  
  EPX72174.1 232 QLLPLNCVTNLC 243
                 **9988776544 PP

  == domain 2  score: 80.5 bits;  conditional E-value: 6.6e-26
      SEN1_N 424 kalalDikslaeelekLsagkqeilqsgvlrrsknlWkalykalssgdldlakalLkalaplagleklkpkskekkkeldaakaafNkalkaireliar 522
                 + l +Di+ ++ ++++L + ++ i +++     +++W+++  +   + ++   + L+++  +  +e  +++        ++++  f +  +++ + i++
  EPX72174.1 397 RSLLYDILFISWAHKALTKDSSFIFDPTYK--VSPFWNSVDIKDV-NYMNRFFEGLSSCYFVHDIEISETT------TSEKSVVLFSEIWQTLSSNISS 486
                 6789****************9966555555..*******987444.2223335556666666666665554......346799**************** PP

      SEN1_N 523 llerlsdfsspselkellsdpeaaqalisllfspddelyqaalnllkqaf.dvdsRldalralleknltatlraindalrqltklktfepaprlvrvlm 620
                  l+++s+  +pse+ + +++  +++ l+ ll+sp+++ly  a+ + ++ f  v  + + + +l+e+++   +++++da  +++++ tf pa r++r  +
  EPX72174.1 487 FLQSFSE-RDPSEITSYMQNDLIFDTLLGLLLSPSQQLYADAFRIFQSFFgKVKNKNEVMKKLVENHFVGIVHGLVDATLHWQSALTFFPALRIMRFVS 584
                 *******.88****************************************99********************************************999 PP

      SEN1_N 621 dildvLcdpsdGlLrsrsltseaeaaalkklWelmwqfLdmiFkrtesWaekyekseMvefcRDtlefaeaLldqyrlfasalsgaseadstesksese 719
                  + ++++        + ++ se++ ++l ++W+++w++Ld++ ++  +W+ + ++++    ++ +l ++ +L+ +++lf ++l+             + 
  EPX72174.1 585 TVNKIFST-------DNKIWSENDLSSLGAYWQCIWNVLDLVHSNVARWSLYNSNDTVKLSMKLALKLSTDLFQNDGLFIKFLA-------------KF 663
                 99888877.......555577789***********************************************************5.............34 PP

      SEN1_N 720 agkkllkalakalkglvkWLRLrDeeLlesc 750
                  g  ll +  +al +l++WL+ +D eL e++
  EPX72174.1 664 DGLVLLGETSDALFSLTTWLKINDLELREQV 694
                 6889**********************98776 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.5   0.0   7.4e-11   9.4e-08       3     143 ..    1140    1414 ..    1138    1416 .. 0.78

  Alignments for each domain:
  == domain 1  score: 32.5 bits;  conditional E-value: 7.4e-11
      AAA_19    3 eav.e.alkekvllvtaGpGtGKTrvlkhivallvelggvkp..............eeillvaftgrAakelrerlaalgaeatTiHrlal...... 77  
                  +a+ +   +++  l+ ++pGtGKT+++ +i++ l+   ++                +++ll+a+ + A++e+  rl+      +  H++        
  EPX72174.1 1140 QAIlSsLDNSGFTLIQGPPGTGKTKTIIGIITALLVDLNRYHisrpggqssstepkQQMLLCAPSNAAVDEVLLRLKRGFTLSNGEHYVPKvvrign 1236
                  55533345678999*************9999776555444335999***************************999555544444444433666666 PP

      AAA_19   78 ................................................................................................. 77  
                                                                                                                   
  EPX72174.1 1237 petinvavrdtsleyqtekqllevnqgavdlgslqeltrwrdvfynciqkiedlekqidvardmeedtkalgqdlqnsineknlaeqkieefqsqsf 1333
                  66666677888899999999999***********************************************************************999 PP

      AAA_19   78 .................ldfddlltealelle..............eaeeekklqeeellivDEfqdvdelqyrLlkallgekkklllvGDpdQliy 143 
                                   l             +              +   +++l +  ++i+DE+ +  el   +    +g  kk +lvGDp+Ql++
  EPX72174.1 1334 tknkevdhlrkkaqkaiL-------------KqadvvcatlsgsghDLVAHSFL-NFSTVIIDEAAQAVELDTII-PLRYGA-KKCILVGDPNQLPP 1414
                  999665544433333321.............35666666777888766777888.667******98776655433.333323.458*********97 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   3.6e-07   0.00046       2      62 ..    1134    1211 ..    1133    1269 .. 0.85
   2 !   10.5   0.0   0.00029      0.38      86     130 ..    1373    1414 ..    1327    1422 .. 0.69

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 3.6e-07
      AAA_30    2 lnaeQaaavealltsgdrvavltGpAGtGKttalkal.reaweaag.................grviglAptgkaAkvL 62  
                  +n+ Qa+a+ + l ++  +++++Gp+GtGKt ++ ++ ++++ + +                 ++++++Ap+++a +++
  EPX72174.1 1134 VNSPQAQAILSSLDNSG-FTLIQGPPGTGKTKTIIGIiTALLVDLNryhisrpggqssstepkQQMLLCAPSNAAVDEV 1211
                  6788*****99999996.*************888777355555556799999999999999999999999999998873 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00029
      AAA_30   86 lepgtllivDEagmvdtkqlaallkaaekagakvilvGDerQlas 130 
                  + + + +i+DEa+ +   ++   l+  +k   k+ilvGD++Ql++
  EPX72174.1 1373 FLNFSTVIIDEAAQAVELDTIIPLRYGAK---KCILVGDPNQLPP 1414
                  3444789*****98866555555555544...8**********97 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.1         3   3.8e+03     116     163 ..     706     752 ..     704     777 .. 0.68
   2 ?    2.5   0.0     0.082     1e+02       2      21 ..    1153    1172 ..    1152    1210 .. 0.81
   3 !   19.8   0.0     4e-07   0.00052      46     233 ..    1362    1618 ..    1323    1619 .. 0.77

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 3
  Viral_helicase1 116 sslshrvgrrttyllpsdvaeilsakvgteveversgelkvetepkgq 163
                      s+++ +++ rt ++l ++ +++++a+ ++ ++++r  e+ v  +p+ +
       EPX72174.1 706 SNFDYLFEDRTINFLTEFIIKKQKAH-LSADQCKRLAEVIVQASPEAK 752
                      67788899999999999999999999.899999988887444444444 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.082
  Viral_helicase1    2 vvhGvpGcGKStlirkllrt 21  
                       +++G pG GK++ i  ++  
       EPX72174.1 1153 LIQGPPGTGKTKTIIGIITA 1172
                       899**********9988866 PP

  == domain 3  score: 19.8 bits;  conditional E-value: 4e-07
  Viral_helicase1   46 svrtvdsflmalvkstkgkililDEylllhaGyill.laalskaklvilfGDplQipfhsrnasfllahlpssl....shrvgrrttyllps 132 
                       s+++ d + ++++   ++ ++i+DE+ ++   +++  +  +++ak +il+GDp+Q p    n+++   +++ sl    +++ + + + l  +
       EPX72174.1 1362 SGSGHDLVAHSFL---NFSTVIIDEAAQAV--ELDTiIPLRYGAKKCILVGDPNQLPPTVLNQKAASYNYSQSLfvriQKLHSEQMCLLSIQ 1448
                       4555555555555...479*******8876..899988899****************99989888888888888778877788888888888 PP

  Viral_helicase1  133 dvaeilsak....................vgteveversgel..........kvetepkgqe..kvlvyltftqalkealgvr......... 183 
                       ++ +   +                     +++ ++++++             +++t++++++  +v ++ ++ ++l+++  +          
       EPX72174.1 1449 YRMHPHISYfpsmkfydsrlkdgegmaekTKQVWHSNSQFDQyrlfdirgqeRISTTSSSYNieEVGYVVQMYEKLVASFPDVnftgrigvi 1540
                       88888888888888999999999999987334444433333344555555555555555555678888888888888888888999****** PP

  Viral_helicase1  184 ..........................evttvhevqGltfdkVtlvllketdlelis....esrenllvAlTRhrkslvil 233 
                                                 ++ tv + qG++ d  ++ + k+ ++   s    ++   l vAlTR+r+sl i+
       EPX72174.1 1541 tpyrqqlhelrkafkekfgktimssvDIQTVDGFQGQEKDIIIFSCVKSYSKY--SigflRDFRRLNVALTRARSSLFIV 1618
                       **************************99***********99999999887744..455997788999*********9986 PP

>> Helicase_RecD  Helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00037      0.48       2      88 ..    1154    1261 ..    1153    1272 .. 0.85
   2 ?    1.7   0.2      0.16   2.1e+02      68     107 ..    1331    1393 ..    1283    1407 .. 0.52

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00037
  Helicase_RecD    2 ltAdRGRGKSaa.lGlalaaliaegk................snilvtapskenvktlfeflakglealglke....eekkkkaekaelrvrkq 74  
                     +++ +G+GK+ + +G+++a l+  ++                +++l++aps+++v++++ +l++g++  + ++      +  ++e+++++vr++
     EPX72174.1 1154 IQGPPGTGKTKTiIGIITALLVDLNRyhisrpggqssstepkQQMLLCAPSNAAVDEVLLRLKRGFTLSNGEHyvpkVVRIGNPETINVAVRDT 1247
                     78999****965279999999999889999*********9999***********************8777666887766677778888899999 PP

  Helicase_RecD   75 rieyiapdellklk 88  
                     ++ey + ++ll+ +
     EPX72174.1 1248 SLEYQTEKQLLEVN 1261
                     99999999888765 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.16
  Helicase_RecD   68 elrvrkqrieyiapdellklkeqa......................dllvvDEAA.aiplpll 107 
                     +  ++++++++++ ++ ++  +qa                       ++++DEAA a++l+++
     EPX72174.1 1331 QSFTKNKEVDHLRKKAQKAILKQAdvvcatlsgsghdlvahsflnfSTVIIDEAAqAVELDTI 1393
                     22222444444444444444433333444444555555555566668899***9944566555 PP

>> UvrD_C_2  UvrD-like helicase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   5.3e-05     0.068       5      52 .]    1569    1618 ..    1565    1618 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 5.3e-05
    UvrD_C_2    5 ltihkaQGsefpaVivfdpd.laaarmgel.rrrlLYtavTRAreklilv 52  
                   t+  +QG+e +++i+  +  ++ +  g l   r L +a+TRAr  l++v
  EPX72174.1 1569 QTVDGFQGQEKDIIIFSCVKsYSKYSIGFLrDFRRLNVALTRARSSLFIV 1618
                  6999************8888777777665589999************997 PP

>> MukB  MukB N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00022      0.29      28      64 ..    1151    1187 ..    1142    1200 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00022
                  HHHHHS--SHHHHHHHHHHHHHHS--TTT-------- CS
        MukB   28 vttlsGgnGaGksttmaafvtaliPdlsllhfrntte 64  
                   t ++G  G+Gk+ t+++++tal+ dl + h    + 
  EPX72174.1 1151 FTLIQGPPGTGKTKTIIGIITALLVDLNRYHISRPGG 1187
                  4667999**********************99866544 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.0    0.0018       2.3       4      23 ..    1148    1167 ..    1145    1260 .. 0.71
   2 ?    0.6   0.1       0.5   6.4e+02      38      99 ..    1302    1383 ..    1269    1398 .. 0.70

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0018
      AAA_22    4 tagilvvtGesGtGKTtllr 23  
                  + g++++ G++GtGKT ++ 
  EPX72174.1 1148 NSGFTLIQGPPGTGKTKTII 1167
                  5799************9875 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.5
      AAA_22   38 erpevvfvtlpsstsskdllrellralglelkaerlsseellealeqalrarav....................ielliiDE 99  
                  e+ + +  +l++s + k+l+++  ++++++  +++++ ++l+++ ++a+ ++a+                     + +iiDE
  EPX72174.1 1302 EDTKALGQDLQNSINEKNLAEQKIEEFQSQSFTKNKEVDHLRKKAQKAILKQADvvcatlsgsghdlvahsflnFSTVIIDE 1383
                  4555555566666677788888888888888888999999999999999988885555555555555555555555555555 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1       2.2   2.8e+03      65     119 ..     756     806 ..     722     816 .. 0.70
   2 ?    9.7   0.0   0.00083       1.1       2      24 ..    1153    1175 ..    1152    1216 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 2.2
                 ETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTSSSTEEEEEEESSGGGSTHHH CS
         AAA  65 DEidalaksrsgseseeeervvnqLlteldgvkkkeskvivigatnrpdkldpal 119
                 DE  +la++r +++++ e    +q+ ++++  kk+  k+ +++a+++ + ++p +
  EPX72174.1 756 DE-NRLAEAR-KTKKQTELVSGSQFNKKVEPPKKE--KTQIVAASTDKKAPTPRM 806
                 55.4566666.566677777778999999999995..678999998877777665 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00083
                  EEESSTTSSHHHHHHHHHHHHTH CS
         AAA    2 llyGppGtGKTllakavakelgv 24  
                  l+ GppGtGKT ++  +++ l v
  EPX72174.1 1153 LIQGPPGTGKTKTIIGIITALLV 1175
                  789********999998888643 PP

>> Cyanate_lyase  Cyanate lyase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       7.2   9.2e+03      11      29 ..     739     757 ..     737     758 .. 0.90
   2 ?    9.9   0.0   0.00051      0.65      22      43 ..    1549    1570 ..    1539    1585 .. 0.82

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 7.2
  Cyanate_lyase  11 RlyEivqvygealkelinE 29 
                    Rl E++ +  +  k+++ E
     EPX72174.1 739 RLAEVIVQASPEAKSILDE 757
                    9*************99988 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00051
  Cyanate_lyase   22 alkelinEkfGdGimSaidfsl 43  
                      l++ ++EkfG  imS +d+++
     EPX72174.1 1549 ELRKAFKEKFGKTIMSSVDIQT 1570
                     478889*************975 PP

>> CPSase_L_D3  Carbamoyl-phosphate synthetase large chain, oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.2       1.1   1.4e+03      58     119 ..     755     824 ..     729     826 .. 0.63
   2 ?   13.3   1.3   6.3e-05      0.08      22     109 ..    1265    1359 ..    1248    1363 .. 0.73

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 1.1
  CPSase_L_D3  58 ldeellreakklGfsDkqiaell........eeeeeeevrelrkklgilpvykrvDtcAaeFeaetpYlY 119
                  lde+ l ea+k   + + ++           ++e+++ v++   k+  +p +k+ D +  e+ a+ + +Y
   EPX72174.1 755 LDENRLAEARKTKKQTELVSGSQfnkkveppKKEKTQIVAASTDKKAPTPRMKMLDQLRQEYIARRAGHY 824
                  5555555555555444444422234555665445555566666777789*******99999998877666 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 6.3e-05
  CPSase_L_D3   22 lsveeiheltkidpwFLekleelvelekelkkkkk......eldeellreakklGfsDkqiaell...eeeeeeevrelrkklgilpvykrvDtcA 108 
                   +++  ++elt+    F ++++++ +lek++  +++       l ++l +++ ++ + +++i+e+      ++++ev +lrkk++ ++  k+ D + 
   EPX72174.1 1265 VDLGSLQELTRWRDVFYNCIQKIEDLEKQIDVARDmeedtkALGQDLQNSINEKNLAEQKIEEFQsqsF-TKNKEVDHLRKKAQ-KAILKQADVVC 1358
                   4677899**********************9988878555555555556666666666666665556642.45677999997655.67888888765 PP

  CPSase_L_D3  109 a 109 
                   a
   EPX72174.1 1359 A 1359
                   4 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       2.8   3.6e+03      58      87 ..     515     546 ..     499     569 .. 0.83
   2 ?   -2.9   0.1       4.5   5.7e+03      62     116 ..     804     855 ..     803     888 .. 0.61
   3 ?    9.7   0.7   0.00062       0.8       3      51 ..    1133    1176 ..    1131    1392 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 2.8
                 EEEESSHHHHHHHHHHGGGGTGG......GEE CS
      ResIII  58 lflvprkslleqtleefkkflseayke..igk 87 
                 l+l p+++l+  + + f++f+ + +++  ++k
  EPX72174.1 515 LLLSPSQQLYADAFRIFQSFFGKVKNKneVMK 546
                 789999***********999999876544333 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 4.5
                 SSHHHHHHHHHHGGGGTGG....GEEEESSS-B--.......-SEEEEEHHHHHH CS
      ResIII  62 prkslleqtleefkkflseaykeigkkvsgdkkkakekdstnkkilvttiqslda 116
                 pr ++l+q+++e+      +y++    vs++k ++   ++++    + t+q  d+
  EPX72174.1 804 PRMKMLDQLRQEYIARRAGHYAARDAAVSSRKTTF---ENQKPPTNLLTEQDSDN 855
                 67788999999997766666666555555555555...33333333333333333 PP

  == domain 3  score: 9.7 bits;  conditional E-value: 0.00062
                  EE-HHHHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S. CS
      ResIII    3 elreyQeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkk 51  
                  ++++ Q++ai + l     ++    li+ + GtGKT +++ +i +ll  
  EPX72174.1 1133 QVNSPQAQAILSSL-----DNSGFTLIQGPPGTGKTKTIIGIITALLVD 1176
                  66777888887776.....5667899*****************998755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1689 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1358  (0.0757432); expected 358.6 (0.02)
Passed bias filter:                      669  (0.0373138); expected 358.6 (0.02)
Passed Vit filter:                        88  (0.00490825); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 1.15u 0.32s 00:00:01.47 Elapsed: 00:00:00.52
# Mc/sec: 9846.33
//
Query:       EPX72175.1  [L=149]
Description: 60S ribosomal protein L24 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-31  108.7   0.1    2.9e-31  107.5   0.1    1.6  1  Ribosomal_L24e  Ribosomal protein L24e


Domain annotation for each model (and alignments):
>> Ribosomal_L24e  Ribosomal protein L24e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.5   0.1   1.6e-35   2.9e-31       1      66 []       1      66 [.       1      66 [. 0.98

  Alignments for each domain:
  == domain 1  score: 107.5 bits;  conditional E-value: 1.6e-35
                    XXX-B-TTT-SB--SS--EEEE-TTS-EEEESSHHHHHHHHTT--GGGSTTSTTT-XXXXXXXX.. CS
  Ribosomal_L24e  1 mktekCsFsgykiyPGhGkrfvrnDgkvfrFlssKceklfkqkrnPrklkWTkayRrahkkeltee 66
                    mk+e+CsFsg+k+yPG G++fvr D+kvfrF+++K+e+lf+q++nPr+l WT++yRr+hkk+l+ee
      EPX72175.1  1 MKVEICSFSGAKVYPGAGRLFVRGDNKVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHKKGLSEE 66
                    9*************************************************************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1529  (0.0852808); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1072.96
//
Query:       EPX72176.1  [L=468]
Description: ubiquitin carboxy terminal hydrolase Ubp6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.8e-49  166.7   0.1    9.6e-49  166.2   0.1    1.2  1  UCH        Ubiquitin carboxyl-terminal hydrolase
    5.3e-13   48.5   0.0    1.2e-12   47.4   0.0    1.6  1  ubiquitin  Ubiquitin family
    2.3e-12   47.1   3.6    1.1e-11   44.9   3.6    2.0  1  UCH_1      Ubiquitin carboxyl-terminal hydrolase


Domain annotation for each model (and alignments):
>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.2   0.1   1.6e-52   9.6e-49       2     257 .]     103     462 ..     102     462 .. 0.88

  Alignments for each domain:
  == domain 1  score: 166.2 bits;  conditional E-value: 1.6e-52
                 EES-SSSTHHHHHHHHHHHTSHHHHHHHHTCHHCCSSTCCCCC-.TT.TTS.TTHHHHHHHHHHHHHHSH-CCEE--HHHHHHHHHHSGGGT....... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....... RF
         UCH   2 GlsNlGntCymnsvlQcLfsipelrdyllsleevkkesrnkkelnesnplgkkgelakalkdlfkellkskskavsPkklkktlsklaksfs....... 93 
                 Gl+NlGntCymns++Q+L +ipel+d +++       s+ +              ++ ++++l++++   + ++++P ++++ l+ ++++fs       
  EPX72176.1 103 GLVNLGNTCYMNSTVQLLRAIPELKDAVQK-------SNVS------------SGVIGEFSSLLRSMD--SANSITPVRFLQNLRLEYPQFSemsretg 180
                 9**************************999.......2222............249************..579************************** PP

                 SSSTCEHHHHHHHHHHHHHHHHCC...............HCCCHHHHHHCCCTTSHHHHHH-EEEEE................................ CS
                 xxxxxxxxxxxxxxxxxxxxxxxx...............xxxxxxxxxxxxxxxxxxxxxxxxxxxx................................ RF
         UCH  94 gykqqDaqEflaflLdqlhedlnr...............evaeekwkkhlkrndslitdlfegqlks................................ 145
                 gy qqDa+E+++flL++l+++l++               +      +++++++  + +d f     +                                
  EPX72176.1 181 GYAQQDAEECWSFLLSSLQRSLSSewvqknmsgkltstmK-----CDENENEEPTVSQDTFLSLPCHismhtnymtqgilegltqkltkrsdvlnrdai 274
                 ************************8888888887544442.....24444444444444433222225555588889999999999************* PP

                 ...EEEEEEB-SEEEEEEESEEETEE...EEE--SEEB--SEEE-GGGBSS-BTTS-TCS-B..................................... CS
                 ...xxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..................................... RF
         UCH 146 ...klklkrlPeiLiihlkRfsynss...ksKlntkvefpeeldlssylaeekkkkteekkk..................................... 201
                      +++rlP++L++++ Rf+++ s   k K+ +kv+fp eld+ ++++ e ++k    ++                                     
  EPX72176.1 275 ynkVSRISRLPKYLTVNFVRFYWKASlgqKAKILRKVKFPFELDAVEFCSPELSQKLIPVRDklreiekndeeqerntkrikiqpseeereseaesrlt 373
                 **999******************999********************9999888887766666899999999999999999******************* PP

                 ........................EEEEEEEEEES.CTTSEEEEEEEECTTTTE.EEEEETTEEEEE-HHCCCTT........CEEEEEE CS
                 ........................xxxxxxxxxxx.xxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxx........xxxxxxx RF
         UCH 202 ........................YeLiavvvHsG.slssGHYvayiknekngk.WykydDetvkevkeeeevls........sayiLfY 257
                                         Y+Li+v++HsG s+ssGHY a+i+n+++++ W++++D++v+ v +e +++s        sayiL+Y
  EPX72176.1 374 qiatcqslvdpqlseddganitglYDLIGVLSHSGaSASSGHYQAWIRNPDQHSeWFRFNDSRVSTVPAE-KIESldgggeadSAYILLY 462
                 ************************************************8877766*************87.899999************9 PP

>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.4   0.0     2e-16   1.2e-12       1      70 [.       4      72 ..       4      74 .. 0.96

  Alignments for each domain:
  == domain 1  score: 47.4 bits;  conditional E-value: 2e-16
                EEEEETTSEEEEEEEETTSBHHHHHHHHHHHHTSSGGGEEEEETTEEE-TTSBHGGHTTSTTEEEEEEES CS
   ubiquitin  1 itvktldgkkitleveesdtveelKekiaekegipaeqqrLiysGkvLedertleeygiqdgstlhlvlr 70
                +t++ ++gk + +e +++d+  +lK+k++  +++pae+q++i +G +L+d++ ++ +g+++++t++++ +
  EPX72176.1  4 VTIR-WQGKAYNVEYDPEDSGISLKNKLSILTQVPAERQKIIVKGGQLKDDQVMKNVGLKPNATVMMMGT 72
                5788.89************************************************************986 PP

>> UCH_1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.9   3.6   1.9e-15   1.1e-11       1     320 []     102     437 ..     102     437 .. 0.70

  Alignments for each domain:
  == domain 1  score: 44.9 bits;  conditional E-value: 1.9e-15
                 xxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1   1 sGLEnhivnsYlNslLQvlyfipplr.nlalshlakeckkehcLlcElgflfdmldkakglncqasnFlrals.sipeasalglileeeeetekssais 97 
                 sGL n  +++Y+Ns +Q+l+ ip+l  ++ +s +       + ++ E+  l++ +d a+  ++    Fl+ l+ + p+ s++        et       
  EPX72176.1 102 SGLVNLGNTCYMNSTVQLLRAIPELKdAVQKSNV------SSGVIGEFSSLLRSMDSAN--SITPVRFLQNLRlEYPQFSEMSR------ET----GGY 182
                 8*************************55555555......788***************9..56677899999954554444433......21....112 PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1  98 lssliqsfnrflldqlekelketkknsseeesaieqllgtkaettirclkCgsek.srksstlvldlkyP.kpsnekkeakvtfasilksslerekttr 194
                  ++  +++  fll+ l++ l++         + +++ ++ k+++t++c + ++e+ + +++t+    + P + s    ++++  + il+   ++    +
  EPX72176.1 183 AQQDAEECWSFLLSSLQRSLSS---------EWVQKNMSGKLTSTMKCDENENEEpTVSQDTFL---SLPcHIS---MHTNYMTQGILEGLTQK---LT 263
                 2223346999999999999877.........4567777788899*****555555433333333...3365432...23333334444443333...22 PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................................................xxxxxxxxx RF
       UCH_1 195 awCekCkryqpteqrktvknlPpvLalnakleeeeelelwkt................................................knwlpleik 245
                    +  +r +  ++ +++ +lP+ L++n  ++      +wk+                                                ++   ++ik
  EPX72176.1 264 KRSDVLNRDAIYNKVSRISRLPKYLTVNFVRF------YWKAslgqkakilrkvkfpfeldavefcspelsqklipvrdklreiekndeeQERNTKRIK 356
                 2345568999*******************986......4444444455556669999999999999999997777777777777776665233334444 PP

                 xxxxxxxxx...............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 246 lsldedknl...............eeklkeerekakaekeikvYeLqsvvvhigdskesghLvslvkvaekelerdppesqWylFNDflV 320
                 ++ +e+  +               ++  + + ++++  + +  Y+L++v  h g s +sgh+ + ++  +      +++s+W+ FND  V
  EPX72176.1 357 IQPSEE--EreseaesrltqiatcQSLVDPQLSEDDGANITGLYDLIGVLSHSGASASSGHYQAWIRN-P------DQHSEWFRFNDSRV 437
                 444433..1458899999999988666666666666789999************9999*********4.3......3468*******877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (468 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       886  (0.0494171); expected 358.6 (0.02)
Passed bias filter:                      514  (0.0286686); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.44
# Mc/sec: 3205.20
//
Query:       EPX72177.1  [L=168]
Description: ARP2/3 actin-organizing complex subunit Arc4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.6e-76  253.6   4.1    7.3e-76  253.4   4.1    1.0  1  ARPC4     ARP2/3 complex 20 kDa subunit (ARPC4)


Domain annotation for each model (and alignments):
>> ARPC4  ARP2/3 complex 20 kDa subunit (ARPC4)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  253.4   4.1   4.1e-80   7.3e-76       1     166 [.       1     166 [.       1     167 [. 0.99

  Alignments for each domain:
  == domain 1  score: 253.4 bits;  conditional E-value: 4.1e-80
                 XX--HHHHHHHHHHHHHHHT-------SSSTT----HHHH---TTTB---EEEESSSS-EEEEEEBSSEEEEEEE----SSHHHHHHHHHHHHHGGGTT CS
       ARPC4   1 maatlqpYldavrktLeaalclenfasqvverhnkpevEvrkskelllkplviarsekekvliEssinSvRvSlkikqadelerillkkftrflmkrae 99 
                 m++tl+pYl+avr+tL+a+l+le+f+s++ver+++pevEv+ks e+llkplv++r+e+e++liEss+nSvR S++ikq+de+eril++kf++flm rae
  EPX72177.1   1 MSNTLRPYLNAVRSTLTASLALEEFSSEIVERQSQPEVEVGKSLEVLLKPLVVSRNEQEQCLIESSVNSVRFSIRIKQVDEIERILVHKFMQFLMGRAE 99 
                 99************************************************************************************************* PP

                 TSTTB-SS--TT-SEEEEEETTHHHHS-HHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHH CS
       ARPC4 100 afeilRrkpvegydiSfLitnehveklgkkklidfiikFveeidkeiselklslnararivaeeflk 166
                 +f ilRrkpv gydiSfLitn h+e++ k+kl+dfii+F+ee+d+eise+kl ln rar vae++l+
  EPX72177.1 100 SFFILRRKPVPGYDISFLITNYHTEEMLKHKLVDFIIEFMEEVDAEISEMKLFLNGRARLVAESYLS 166
                 *****************************************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       719  (0.0401026); expected 358.6 (0.02)
Passed bias filter:                      485  (0.0270511); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1214.66
//
Query:       EPX72178.1  [L=1139]
Description: pentrin Pcp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.1e-20   71.0   0.3    9.1e-20   71.0   0.3    3.7  3  PACT_coil_coil  Pericentrin-AKAP-450 domain of centrosomal ta
    2.2e-16   59.7   4.4    2.2e-16   59.7   4.4   12.6 12  Cnn_1N          Centrosomin N-terminal motif 1
     0.0038   17.2  28.8     0.0038   17.2  28.8    7.4  6  CEP63           Centrosomal protein of 63 kDa
     0.0066   16.7   9.0     0.0066   16.7   9.0   11.8 10  TMF_TATA_bd     TATA element modulatory factor 1 TATA binding
  ------ inclusion threshold ------
      0.014   15.2   0.9      0.014   15.2   0.9   13.8 17  DivIC           Septum formation initiator
       0.07   12.7   3.6       0.52    9.9   3.5    2.7  1  Spc110_C        Spindle pole body component 110 C-terminal do
        1.4    8.5  12.9       0.21   11.2   0.9    3.6  3  Trimer_CC       Trimerisation motif
        2.6    8.0   8.9        6.8    6.6   0.8    4.2  3  zf-C2H2_9       C2H2 type zinc-finger (1 copy)


Domain annotation for each model (and alignments):
>> PACT_coil_coil  Pericentrin-AKAP-450 domain of centrosomal targeting protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       2.1   4.8e+03      17      42 ..     387     412 ..     387     440 .. 0.79
   2 ?   -1.9   0.3       2.4   5.4e+03      19      62 ..     577     622 ..     572     631 .. 0.65
   3 !   71.0   0.3     4e-23   9.1e-20       1      83 []    1039    1113 ..    1039    1113 .. 0.98

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 2.1
  PACT_coil_coil  17 rYLllqlevfqacnkadlrllarigv 42 
                     +YL  q+++f++ n++   l ++i+ 
      EPX72178.1 387 EYLNNQIHDFEDMNNELEDLTNHIEN 412
                     5999*******999987777666654 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 2.4
  PACT_coil_coil  19 Lllqlevfqacnkadlrllarigvelkk..kkkskeeekrrkprrk 62 
                     L+ q++   a++++ l  l+  + ++++  k+ +k e ++++  +k
      EPX72178.1 577 LEEQIRNLRASEQELLTRLHSGQETISNlrKNLNKFELEKEELSQK 622
                     6778888999999999988887777653333334444444444444 PP

  == domain 3  score: 71.0 bits;  conditional E-value: 4e-23
  PACT_coil_coil    1 rleReeslRkdlayqKrYLllqlevfqacnkadlrllarigvelkkkkkskeeekrrkprrklrsaatavraiaRmrvlarkW 83  
                      ++eRe++lR dla++K+++llql+++++cnk +lrll++ig+++        ++  rk+r +++s+  +++ ++Rm++++  W
      EPX72178.1 1039 KFEREHTLRLDLAFSKKFILLQLTGYETCNKLNLRLLQKIGITP--------DNAVRKKRISFKSVTILICSVQRMKRMRHDW 1113
                      79******************************************........9999************************999 PP

>> Cnn_1N  Centrosomin N-terminal motif 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.7   4.4   9.9e-20   2.2e-16       1      71 [.     139     209 ..     139     211 .. 0.97
   2 ?    1.4   1.2      0.16   3.6e+02      15      58 ..     210     253 ..     208     259 .. 0.64
   3 ?   -0.9   0.4      0.82   1.8e+03      56      71 ..     292     307 ..     263     315 .. 0.52
   4 ?   -0.0   5.7      0.45     1e+03      36      60 ..     340     364 ..     301     383 .. 0.66
   5 ?    4.0   6.8     0.024        55       4      56 ..     405     463 ..     402     473 .. 0.88
   6 ?  -10.8  18.4         8   1.8e+04       2      66 ..     475     581 ..     474     627 .. 0.61
   7 ?   -5.1  14.4         8   1.8e+04       7      58 ..     643     707 ..     599     722 .. 0.60
   8 ?   -0.8   4.4      0.78   1.7e+03      38      69 ..     687     718 ..     685     774 .. 0.84
   9 ?   -0.4   0.1      0.59   1.3e+03      49      60 ..     812     823 ..     787     833 .. 0.64
  10 ?    2.5   2.6     0.075   1.7e+02      30      71 ..     856     900 ..     844     902 .. 0.68
  11 ?   -1.8   2.2       1.6   3.6e+03      24      59 ..     903     940 ..     894     952 .. 0.71
  12 ?   -4.2   0.6         8   1.8e+04      52      71 ..    1110    1129 ..    1103    1130 .. 0.62

  Alignments for each domain:
  == domain 1  score: 59.7 bits;  conditional E-value: 9.9e-20
      Cnn_1N   1 TlrEqeeqidkLkKENFdLKLriyfLeerleklseeqkeellkenielkveveslqkelkekkkllreaek 71 
                 TlrEqe+ ++++ +ENF+L+ +i++L++rl+ +++eq++e+++ n++l+ve+ +l  +lk+ ++ll+++++
  EPX72178.1 139 TLREQEKILENVGRENFGLRVKIAYLNKRLDSMAPEQIREAVNDNVDLHVERTKLLLQLKKSEQLLTKSHS 209
                 9*****************************************************************99876 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.16
      Cnn_1N  15 ENFdLKLriyfLeerleklseeqkeellkenielkveveslqke 58 
                 EN dL  +i+fLe+     ++++++  ++    l++e  +l+ +
  EPX72178.1 210 ENDDLVKKIQFLEKVNSVEQSQNMKVFMERIRSLETECSQLKAQ 253
                 78888889****99766555555555555555566666666554 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.82
      Cnn_1N  56 qkelkekkkllreaek 71 
                 q+ l+ek++++ +++k
  EPX72178.1 292 QDMLNEKDEEISSLKK 307
                 2222222222222222 PP

  == domain 4  score: -0.0 bits;  conditional E-value: 0.45
      Cnn_1N  36 eqkeellkenielkveveslqkelk 60 
                 ++ ++l +e++ lk+e+++  +el+
  EPX72178.1 340 KKYDDLQDELVHLKDELQQKNNELD 364
                 3344555555555555555555554 PP

  == domain 5  score: 4.0 bits;  conditional E-value: 0.024
      Cnn_1N   4 EqeeqidkLkKENFdLKLriyfLeerleklse......eqkeellkenielkveveslq 56 
                 ++ ++i+++++E  dL  +i+ Le+    l+e       q e+  ++ni l+++++ l+
  EPX72178.1 405 DLTNHIENMENEKNDLLVKIKSLESTNGDLREmsaslgNQLESFRNKNISLEEKNKMLE 463
                 56799*********************888888888**99************99998776 PP

  == domain 6  score: -10.8 bits;  conditional E-value: 8
      Cnn_1N   2 lrEqeeqidkLkKENFdLKLri.................yfLeerleklse.........................eqkeellkenielkveveslqke 58 
                 lrE++  +++++ E  dL++r                  +f +erl   +e                         +++++l+++n  l+v ++s +k+
  EPX72178.1 475 LRELNIRLETITAEMTDLRMRYelnladldslkkekmslQFENERLRVDTEvtvgqlnqdiehekakyaqlvenstRTRNSLEEKNGSLEVSLQSKEKS 573
                 566677777777777777777655555555555555555333333333333444433333333333333333333356666666666666666666665 PP

      Cnn_1N  59 lkekkkll 66 
                 +  +++++
  EPX72178.1 574 VFLLEEQI 581
                 55555555 PP

  == domain 7  score: -5.1 bits;  conditional E-value: 8
      Cnn_1N   7 eqidkLkKENFdLKLriyfLeerleklse.............eqkeellkenielkveveslqke 58 
                  +++ L++E  d K ++   e+  e+                ++++++++e ++lk+e+ +lq+ 
  EPX72178.1 643 DELSVLRREISDIKDELELSEQDREEALAaqakltsqvdqlsKERQNMMSEYTKLKDELFQLQDR 707
                 44555555555555555333332222222222244222222224444444444444444444444 PP

  == domain 8  score: -0.8 bits;  conditional E-value: 0.78
      Cnn_1N  38 keellkenielkveveslqkelkekkkllrea 69 
                 ++++++e ++lk+e+ +lq+   +k+ ++ ++
  EPX72178.1 687 RQNMMSEYTKLKDELFQLQDRYRRKELEVSDL 718
                 67788888888888888888888777666655 PP

  == domain 9  score: -0.4 bits;  conditional E-value: 0.59
      Cnn_1N  49 kveveslqkelk 60 
                 k+++++lq e++
  EPX72178.1 812 KQKIQELQAEID 823
                 333344444433 PP

  == domain 10  score: 2.5 bits;  conditional E-value: 0.075
      Cnn_1N  30 leklseeqkeellke...nielkveveslqkelkekkkllreaek 71 
                 ++++ e+ +e l+ke      lk e+++l+k+  ++ ++ r +ek
  EPX72178.1 856 VQEMLESYRERLHKEvesKYSLKAELQNLKKDSRSYFEKARLLEK 900
                 555555555666655222578***********9999888887777 PP

  == domain 11  score: -1.8 bits;  conditional E-value: 1.6
      Cnn_1N  24 yfLeerleklseeqkeellk..enielkveveslqkel 59 
                 y+Le++l +++++++ +l++  e   l+++v++l+kel
  EPX72178.1 903 YYLESELMRIKSSSNSNLINdeEKRLLHQKVKDLEKEL 940
                 78889999999988888875114444666677776666 PP

  == domain 12  score: -4.2 bits;  conditional E-value: 8
      Cnn_1N   52 veslqkelkekkkllreaek 71  
                  +++ qk+l+ ++ l r aek
  EPX72178.1 1110 RHDWQKQLEVRQSLQRAAEK 1129
                  55667777777776666666 PP

>> CEP63  Centrosomal protein of 63 kDa
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   7.6         4   9.1e+03      61     148 ..     164     253 ..     136     259 .. 0.55
   2 !   17.2  28.8   1.7e-06    0.0038      29     240 ..     273     482 ..     264     495 .. 0.79
   3 ?    1.7  30.0      0.09     2e+02      43     269 .]     348     571 ..     347     571 .. 0.78
   4 !    5.3   6.0    0.0072        16      28      96 ..     586     658 ..     576     664 .. 0.82
   5 ?    1.4  17.0      0.11   2.5e+02      48     178 ..     635     769 ..     626     783 .. 0.66
   6 ?   -4.6  18.1       7.2   1.6e+04      70     180 ..     802     910 ..     795    1019 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 4
       CEP63  61 lrqqleelekekqelvakyeqqlqklr.eelsklkrsyekLqrkqlkearekeakskeedrvelsrlnskleefrqk..slewekqrlqyq 148
                 l+++l+++  e+   +++ + +l+  r + l +lk+s++ L + +  + +   +k +  ++v+  + +++++ f ++  sle e  +l+ q
  EPX72178.1 164 LNKRLDSMAPEQIREAVNDNVDLHVERtKLLLQLKKSEQLLTKSHSENDDL-VKKIQFLEKVNSVEQSQNMKVFMERirSLETECSQLKAQ 253
                 555555555444333333333333333023456777777666666655552.345555566666666666666655411444433333333 PP

  == domain 2  score: 17.2 bits;  conditional E-value: 1.7e-06
       CEP63  29 qtraletrlkireeeLasarnaldekhkEvgllrqqleelekekqelvakyeqq.lqklreelsklkrsyekLqrk..qlkearekeakskeedrvels 124
                 ++r l+ r +  +eeL+ a+++l+ek++E+  l++qleel    +   +  e++   +l  +++ l++ y+ Lq    +lk++      ++++++ ++ 
  EPX72178.1 273 DMRRLQDRYDEINEELNVAQDMLNEKDEEISSLKKQLEELPSGDRSHSRSKEDNsHVQLLMDFEVLEKKYDDLQDElvHLKDEL-----QQKNNELDYT 366
                 677889999999*****************************9999888877765156999**************8733555554.....5667777777 PP

       CEP63 125 rlnskleefrqkslewekqrlqyqkqvasleaqrkaLaekleliqs.aaykvqlekrkqkLesveldsqseiqrLrskleraqdtleaqelelerLrll 222
                 +  s+++  ++k +e e +     +q++ +e  ++ L + +++i++    k +l  + + Le    +++++++ + + l +  ++   +++ le  + +
  EPX72178.1 367 QDISEVQMLKEKLHEAELHIEYLNNQIHDFEDMNNELEDLTNHIENmENEKNDLLVKIKSLE----STNGDLREMSASLGNQLESFRNKNISLEEKNKM 461
                 888888888888899999999999*********************97778888888888888....677888888888888888888888888876666 PP

       CEP63 223 veelgksk...rvlleekqel 240
                 +e + +s+   ++l e + +l
  EPX72178.1 462 LELMSQSNdteNILRELNIRL 482
                 665555441115555555544 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.09
       CEP63  43 eLasarnaldekhkEvgllrqqleelekekqelvakyeqqlqklreelsk...lkrsyekLqrkqlkearekeakskeedrvelsrlnskleefrqksl 138
                 eL  +++ l++k++E   ++q + e++  k+ l ++ e +++ l++++     +++  e L ++         +++k++  v+++ l+s   + r+ s+
  EPX72178.1 348 ELVHLKDELQQKNNELD-YTQDISEVQMLKEKL-HEAELHIEYLNNQIHDfedMNNELEDLTNHIEN-----MENEKNDLLVKIKSLESTNGDLREMSA 439
                 89999*********986.788888888776554.456666666666655500055555555554322.....34578888999999999999******* PP

       CEP63 139 ewekqrlqyqkqvasleaqrkaLaekleliqsaaykvqlekrkqkL..esveldsqseiqrLrskleraqdtleaqelelerLrllveelgk.skrvll 234
                    +q    +++  sle+++k+L   ++   +     +l+ r +++  e ++l ++ e++   ++l++ ++   + ++e erLr  +e  ++  ++ ++
  EPX72178.1 440 SLGNQLESFRNKNISLEEKNKMLELMSQSNDTENILRELNIRLETItaEMTDLRMRYELN--LADLDSLKKEKMSLQFENERLRVDTEVTVGqLNQDIE 536
                 *********************997777777766777777777766522556666666665..589999999999999999****9988766526799** PP

       CEP63 235 eekqeleeelresekqlqvleeekselkqtlqske 269
                 +ek + ++ +++s ++++ lee + +l+ +lqske
  EPX72178.1 537 HEKAKYAQLVENSTRTRNSLEEKNGSLEVSLQSKE 571
                 **********************************8 PP

  == domain 4  score: 5.3 bits;  conditional E-value: 0.0072
       CEP63  28 aqtraletrlkireeeLasarnaldekhkEvgllrqqlee....lekekqelvakyeqqlqklreelsklkrs 96 
                 a+ + l trl++ +e ++++r+ l++ + E + l q+l e      ++  +l  + +++l+ lr+e+s +k  
  EPX72178.1 586 ASEQELLTRLHSGQETISNLRKNLNKFELEKEELSQKLRErvisSPAKSSNLIDNMNDELSVLRREISDIKDE 658
                 56677889***********************999998876221145677899999***********9999865 PP

  == domain 5  score: 1.4 bits;  conditional E-value: 0.11
       CEP63  48 rnaldekhkEvgllrqqleelekekqelvakyeqql...qklreelsklkrsyekLqrkqlkearek..eakskeedrvelsrlnskleefrqkslewe 141
                  n++d+ + E  +lr+++ +++ e +  ++++e+ l    kl  ++++l++  + +     k ++e    + + ++++ e+s ln kl+e r   ++ e
  EPX72178.1 635 SNLIDNMNDELSVLRREISDIKDELELSEQDREEALaaqAKLTSQVDQLSKERQNMMSEYTKLKDELfqLQDRYRRKELEVSDLNLKLSEKRTSVTNVE 733
                 578888999999999998888887777778888877333478888888888888887766555553332577888899999999999999998776666 PP

       CEP63 142 kqrlqyqkqvasleaqrkaLaekleliqsaaykvqle 178
                 + + q++k     e  r+  a+k++l +  ay+   +
  EPX72178.1 734 EIEKQRKKLDIFAEDIRRLEADKMNLEKV-AYQLSNA 769
                 65555554333344444444444444444.4443333 PP

  == domain 6  score: -4.6 bits;  conditional E-value: 7.2
       CEP63  70 kekqelvakyeqqlqklreelsklkrsyekLqrkqlkearekeakskeedrvelsrlnskleefrqkslewekqrlqyqkqvasleaqrkaLaekleli 168
                 ++ ++l +  +q++q+l++e++kl  sye L  +   +    e+++    + + +++++ le +r++ ++  + +   + +++ l  + ++  ek+ l+
  EPX72178.1 802 TQIEDLIRSQKQKIQELQAEIDKL--SYESLNGQFATKVGLSEPEKLGISPLDKHKVQEMLESYRERLHKEVESKYSLKAELQNLKKDSRSYFEKARLL 898
                 5567899999************99..8****998877777678999999******************998888888999******************** PP

       CEP63 169 qsaaykvqlekr 180
                 ++  y  + e +
  EPX72178.1 899 EKEKYYLESELM 910
                 997776655544 PP

>> TMF_TATA_bd  TATA element modulatory factor 1 TATA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4  14.3    0.0045        10      29     104 ..     234     312 ..     221     314 .. 0.81
   2 ?    2.8   9.5     0.059   1.3e+02      16      84 ..     351     421 ..     324     422 .. 0.81
   3 ?    3.4  11.9     0.039        87      14      89 ..     386     477 ..     383     504 .. 0.58
   4 ?   -0.6   9.4      0.65   1.4e+03       5      85 ..     466     547 ..     463     564 .. 0.87
   5 ?    0.3   8.1      0.36   8.1e+02      24     101 ..     535     609 ..     524     614 .. 0.76
   6 !   16.7   9.0   2.9e-06    0.0066       8      81 ..     632     709 ..     625     718 .. 0.86
   7 ?    3.2   2.9     0.043        96      26      77 ..     692     743 ..     688     752 .. 0.88
   8 ?   -5.2   7.8         8   1.8e+04      27      65 ..     741     779 ..     716     823 .. 0.69
   9 ?    0.1   9.1       0.4   8.9e+02      16      91 ..     876     951 ..     863     955 .. 0.90
  10 ?    0.8   1.4      0.25   5.6e+02      12     102 ..     961    1051 ..     950    1061 .. 0.76

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0045
  TMF_TATA_bd  29 aslkeelerleaerdeareeivklm...keneelkelkkeleelekeleelqeryetlLellGeksEeveELraDvaDl 104
                  + ++e++ +le+e ++++++ +k +   +en ++ +++ +++ l+ +++e++e+++ +  +l ek+Ee+  L++ +++l
   EPX72178.1 234 KVFMERIRSLETECSQLKAQQAKSSpppNENANQVDMDYDMRRLQDRYDEINEELNVAQDMLNEKDEEISSLKKQLEEL 312
                  4455666666666666666666666655889999999**************************************9987 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.059
  TMF_TATA_bd  16 rlsseirrlEgElaslke..elerleaerdeareeivklmkeneelkelkkeleelekeleelqeryetlL 84 
                  +l+ e++++ +El  +++  e++ l+++  ea+  i  l ++ ++ +++++ele+l++++e+++++ + lL
   EPX72178.1 351 HLKDELQQKNNELDYTQDisEVQMLKEKLHEAELHIEYLNNQIHDFEDMNNELEDLTNHIENMENEKNDLL 421
                  57778888888887777444778888888888888888888889999999999999999999988888776 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.039
  TMF_TATA_bd  14 verlsseirrlE...gElaslkeelerleaerdeareeivklmkeneelkelkkeleelek.............eleelqeryetlLellGe 89 
                  +e+l+ +i+  E   +El+ l + +e++e+e++++   i +l ++n +l+e++++l ++ +             ++ el ++ + +  +l e
   EPX72178.1 386 IEYLNNQIHDFEdmnNELEDLTNHIENMENEKNDLLVKIKSLESTNGDLREMSASLGNQLEsfrnknisleeknKMLELMSQSNDTENILRE 477
                  56777777765533367777777888888888888888888888888888777777666662333222222222333444444444444444 PP

  == domain 4  score: -0.6 bits;  conditional E-value: 0.65
  TMF_TATA_bd   5 ssagpsvqlverlsseirrlEgElaslkeelerleaerdeareeivklmkeneelke.lkkeleelekeleelqeryetlLe 85 
                  s+++ + +++ +l+ ++    +E++ l+ ++e   a  d++++e ++l  ene+l+  ++ ++ +l++ +e  + +y +l e
   EPX72178.1 466 SQSNDTENILRELNIRLETITAEMTDLRMRYELNLADLDSLKKEKMSLQFENERLRVdTEVTVGQLNQDIEHEKAKYAQLVE 547
                  56667778899999999**************************************9625678999***99999999988765 PP

  == domain 5  score: 0.3 bits;  conditional E-value: 0.36
  TMF_TATA_bd  24 lEgElaslkeelerleaerdeareeivklmkeneelkelkkeleelekeleelqeryetlLellGeksEeveELraDv 101
                   E E+a++ + +e+ ++ r++++e   +l     +l++++k++  le+++++l+  +++lL+ l   +E +  Lr+ +
   EPX72178.1 535 IEHEKAKYAQLVENSTRTRNSLEEKNGSLE---VSLQSKEKSVFLLEEQIRNLRASEQELLTRLHSGQETISNLRKNL 609
                  466666666666666666666666665555...3577888899999***************************99876 PP

  == domain 6  score: 16.7 bits;  conditional E-value: 2.9e-06
  TMF_TATA_bd   8 gpsvqlverlsseirrlEgElaslkeelerleaerdeareeivklmkeneelkelk....keleelekeleelqerye 81 
                   +s++l+++++ e+  l  E++ +k+ele  e+ r+ea +  +kl++++++l+++     +e+++l+ el +lq+ry 
   EPX72178.1 632 AKSSNLIDNMNDELSVLRREISDIKDELELSEQDREEALAAQAKLTSQVDQLSKERqnmmSEYTKLKDELFQLQDRYR 709
                  67899*****************************************99999876541111677889999999999996 PP

  == domain 7  score: 3.2 bits;  conditional E-value: 0.043
  TMF_TATA_bd  26 gElaslkeelerleaerdeareeivklmkeneelkelkkeleelekeleelq 77 
                  +E+++lk+el +l+   ++ + e+ +l  +  e++++ +++ee+ek+ ++l+
   EPX72178.1 692 SEYTKLKDELFQLQDRYRRKELEVSDLNLKLSEKRTSVTNVEEIEKQRKKLD 743
                  7999999999999999999999999999999999999999999999998876 PP

  == domain 8  score: -5.2 bits;  conditional E-value: 8
  TMF_TATA_bd  27 Elaslkeelerleaerdeareeivklmkeneelkelkke 65 
                   l  + e++ rlea + ++++   +l++  +e + ++++
   EPX72178.1 741 KLDIFAEDIRRLEADKMNLEKVAYQLSNAIQESEVNENS 779
                  344566677777777777777777777666666655554 PP

  == domain 9  score: 0.1 bits;  conditional E-value: 0.4
  TMF_TATA_bd  16 rlsseirrlEgElaslkeelerleaerdeareeivklmkeneelkelkkeleelekeleelqeryetlLellGeks 91 
                  +l++e++ l  + +s+ e+   le+e+  +++e++++ ++++++  +++e + l +++++l++++    +l  ek+
   EPX72178.1 876 SLKAELQNLKKDSRSYFEKARLLEKEKYYLESELMRIKSSSNSNLINDEEKRLLHQKVKDLEKELRIGAQLWTEKE 951
                  68999***************************************9*****************99988777777776 PP

  == domain 10  score: 0.8 bits;  conditional E-value: 0.25
  TMF_TATA_bd   12 qlverlsseirrlEgElaslkeelerleaerdeareeivklmkeneelkelkkeleelekeleelqeryetlLellGeksEeveELraDva 102 
                   +++++++ ++ ++ + +++lk+ +e+l++e + + +   + + + +e ++ ++ +++l+ + ++  + + ++ + l+ k E+   Lr D+a
   EPX72178.1  961 HTLDSMKDALYSKTIKMEQLKSLYEKLKSEYNILLRNDKAEYPRYNEYDKISAGSQNLRIKPTSEVKGLIKMTQFLQSKFEREHTLRLDLA 1051
                   6677888888888888888888888888888877777777777777778888888888887777777788888888888888888888876 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.6       1.7   3.9e+03      24      50 ..     195     221 ..     187     232 .. 0.63
   2 ?   -1.5   0.1         1   2.3e+03      24      40 ..     238     254 ..     220     258 .. 0.52
   3 ?    6.8   0.9    0.0024       5.5      18      53 ..     280     315 ..     274     319 .. 0.89
   4 ?    1.7   0.9       0.1   2.2e+02      18      45 ..     334     361 ..     327     375 .. 0.56
   5 ?   15.2   0.9     6e-06     0.014      11      52 ..     388     429 ..     384     437 .. 0.91
   6 ?   -1.1   0.1      0.76   1.7e+03      23      50 ..     435     462 ..     429     478 .. 0.72
   7 ?    0.8   0.2      0.18   4.1e+02      31      54 ..     501     524 ..     488     527 .. 0.74
   8 ?   -0.0   0.4      0.34   7.7e+02      17      39 ..     526     548 ..     522     560 .. 0.80
   9 ?   -0.7   4.5      0.55   1.2e+03      13      56 ..     547     590 ..     543     617 .. 0.68
  10 ?   -1.3   0.1      0.83   1.9e+03      21      47 ..     597     623 ..     591     625 .. 0.72
  11 ?    2.9   2.6     0.041        91      26      62 ..     638     675 ..     635     677 .. 0.88
  12 ?    5.4   1.6     0.007        16      27      54 ..     674     700 ..     671     711 .. 0.87
  13 ?   -0.0   2.9      0.34   7.6e+02      30      61 ..     732     763 ..     707     775 .. 0.69
  14 ?    9.8   0.4   0.00029      0.66      26      51 ..     801     826 ..     794     838 .. 0.79
  15 ?    2.4   1.9     0.059   1.3e+02      28      58 ..     876     906 ..     854     908 .. 0.74
  16 ?   -3.8   0.3         5   1.1e+04      22      32 ..     929     939 ..     924     941 .. 0.56
  17 ?   -2.5   0.2         2   4.5e+03      39      54 ..     976     991 ..     960     999 .. 0.57

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1.7
                 HHHHHHHHHHHHHHHHHHHHHHHHCC- CS
       DivIC  24 qeiaalqaelaklkaeneeLeaevkdL 50 
                  ++++ ++ l k + en++L ++++ L
  EPX72178.1 195 LQLKKSEQLLTKSHSENDDLVKKIQFL 221
                 455666666666666666666666554 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 1
                 HHHHHHHHHHHHHHHHH CS
       DivIC  24 qeiaalqaelaklkaen 40 
                 + i  l+ e  +lka++
  EPX72178.1 238 ERIRSLETECSQLKAQQ 254
                 33344444444444443 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.0024
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-XXX CS
       DivIC  18 aykqlkqeiaalqaelaklkaeneeLeaevkdLksd 53 
                 +y ++++e++  q+ l+++ +e+ +L++++++L s+
  EPX72178.1 280 RYDEINEELNVAQDMLNEKDEEISSLKKQLEELPSG 315
                 7999***************************99655 PP

  == domain 4  score: 1.7 bits;  conditional E-value: 0.1
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       DivIC  18 aykqlkqeiaalqaelaklkaeneeLea 45 
                 ++  l++++++lq+el+ lk+e ++ + 
  EPX72178.1 334 DFEVLEKKYDDLQDELVHLKDELQQKNN 361
                 4444555555555555555444333333 PP

  == domain 5  score: 15.2 bits;  conditional E-value: 6e-06
                 XXXXXXXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-XX CS
       DivIC  11 fgkkgllaykqlkqeiaalqaelaklkaeneeLeaevkdLks 52 
                 +++++++++ ++++e+++l+++++++ +e+++L  ++k L+s
  EPX72178.1 388 YLNNQIHDFEDMNNELEDLTNHIENMENEKNDLLVKIKSLES 429
                 789************************************965 PP

  == domain 6  score: -1.1 bits;  conditional E-value: 0.76
                 HHHHHHHHHHHHHHHHHHHHHHHHHCC- CS
       DivIC  23 kqeiaalqaelaklkaeneeLeaevkdL 50 
                 ++  a l ++l++ +++n +Le++ k L
  EPX72178.1 435 REMSASLGNQLESFRNKNISLEEKNKML 462
                 5555677778888888888888765544 PP

  == domain 7  score: 0.8 bits;  conditional E-value: 0.18
                 HHHHHHHHHHHHHHHHHCC-XXXX CS
       DivIC  31 aelaklkaeneeLeaevkdLksde 54 
                 a+l++lk+e+++L+ e ++L+ d 
  EPX72178.1 501 ADLDSLKKEKMSLQFENERLRVDT 524
                 567778888888887777776665 PP

  == domain 8  score: -0.0 bits;  conditional E-value: 0.34
                 XHHHHHHHHHHHHHHHHHHHHHH CS
       DivIC  17 laykqlkqeiaalqaelaklkae 39 
                 +++ ql+q+i+  +a++a+l + 
  EPX72178.1 526 VTVGQLNQDIEHEKAKYAQLVEN 548
                 56789999999999999998764 PP

  == domain 9  score: -0.7 bits;  conditional E-value: 0.55
                 XXXXXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-XXXXXX CS
       DivIC  13 kkgllaykqlkqeiaalqaelaklkaeneeLeaevkdLksdedy 56 
                 +++ +++ +l+++   l+  l+++ +    Le+++++L+ +e  
  EPX72178.1 547 ENSTRTRNSLEEKNGSLEVSLQSKEKSVFLLEEQIRNLRASEQE 590
                 56666666667777777777777777777777777777655443 PP

  == domain 10  score: -1.3 bits;  conditional E-value: 0.83
                 HHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       DivIC  21 qlkqeiaalqaelaklkaeneeLeaev 47 
                 + ++ i  l ++l+k   e+eeL +++
  EPX72178.1 597 SGQETISNLRKNLNKFELEKEELSQKL 623
                 556778888888888888888887765 PP

  == domain 11  score: 2.9 bits;  conditional E-value: 0.041
                 HHHHHHHHHHHHHHHHHHHHHHCC-XX.XXXXXXXXXX CS
       DivIC  26 iaalqaelaklkaeneeLeaevkdLks.dedyieerAR 62 
                 i+  ++el  l+ e+ + ++e+++ ++  e++++++A+
  EPX72178.1 638 IDNMNDELSVLRREISDIKDELELSEQdREEALAAQAK 675
                 56778999*****************8867889999998 PP

  == domain 12  score: 5.4 bits;  conditional E-value: 0.007
                 HHHHHHHHHHHHHHHHHHHHHCC-XXXX CS
       DivIC  27 aalqaelaklkaeneeLeaevkdLksde 54 
                 a+l+ ++++l++e++++ +e  +Lk de
  EPX72178.1 674 AKLTSQVDQLSKERQNMMSEYTKLK-DE 700
                 7899********************6.54 PP

  == domain 13  score: -0.0 bits;  conditional E-value: 0.34
                 HHHHHHHHHHHHHHHHHHCC-XXXXXXXXXXX CS
       DivIC  30 qaelaklkaeneeLeaevkdLksdedyieerA 61 
                  +e++k++++ +  ++ +++L+ d+  +e++A
  EPX72178.1 732 VEEIEKQRKKLDIFAEDIRRLEADKMNLEKVA 763
                 44556666666666666666655666666655 PP

  == domain 14  score: 9.8 bits;  conditional E-value: 0.00029
                 HHHHHHHHHHHHHHHHHHHHHHCC-X CS
       DivIC  26 iaalqaelaklkaeneeLeaevkdLk 51 
                 ++++++ + ++k++++eL+ae+++L+
  EPX72178.1 801 VTQIEDLIRSQKQKIQELQAEIDKLS 826
                 67788888888888888888888884 PP

  == domain 15  score: 2.4 bits;  conditional E-value: 0.059
                 HHHHHHHHHHHHHHHHHHHHCC-XXXXXXXX CS
       DivIC  28 alqaelaklkaeneeLeaevkdLksdedyie 58 
                  l+ael++lk++ ++  ++ ++L++++ y+e
  EPX72178.1 876 SLKAELQNLKKDSRSYFEKARLLEKEKYYLE 906
                 4777888888888888888888877777766 PP

  == domain 16  score: -3.8 bits;  conditional E-value: 5
                 HHHHHHHHHHH CS
       DivIC  22 lkqeiaalqae 32 
                 l+q++++l++e
  EPX72178.1 929 LHQKVKDLEKE 939
                 45555555555 PP

  == domain 17  score: -2.5 bits;  conditional E-value: 2
                 HHHHHHHHHCC-XXXX CS
       DivIC  39 eneeLeaevkdLksde 54 
                 + e+L++  ++Lks++
  EPX72178.1 976 KMEQLKSLYEKLKSEY 991
                 3445555555554433 PP

>> Spc110_C  Spindle pole body component 110 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   3.5   0.00023      0.52       3      34 ..    1087    1116 ..    1085    1137 .. 0.90

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00023
    Spc110_C    3 rrrrlkFKTVALlVlacvRmkqvalkrrwdeq 34  
                  r++r+ FK+V +l+ ++ Rmk++  +++w +q
  EPX72178.1 1087 RKKRISFKSVTILICSVQRMKRM--RHDWQKQ 1116
                  689******************96..7888876 PP

>> Trimer_CC  Trimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.6   0.6       7.7   1.7e+04      37      47 ..     276     286 ..     275     288 .. 0.81
   2 ?   11.2   0.9   9.3e-05      0.21      13      49 ..     566     602 ..     555     604 .. 0.78
   3 ?    4.5   0.3     0.011        25      11      45 ..     791     825 ..     789     828 .. 0.92

  Alignments for each domain:
  == domain 1  score: -4.6 bits;  conditional E-value: 7.7
                 HHHHHHHHHHH CS
   Trimer_CC  37 elQkRLDrLEe 47 
                  lQ R D++ e
  EPX72178.1 276 RLQDRYDEINE 286
                 5899*999877 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 9.3e-05
                 XXXXXXXX--HHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Trimer_CC  13 sgtpssdavSRLEEelrkLqatVQelQkRLDrLEetv 49 
                 s  +++  v  LEE +r+L+a  Qel  RL    et+
  EPX72178.1 566 SLQSKEKSVFLLEEQIRNLRASEQELLTRLHSGQETI 602
                 55566667778******************98777776 PP

  == domain 3  score: 4.5 bits;  conditional E-value: 0.011
                 XXXXXXXXXX--HHHHHHHHHHHHHHHHHHHHHHH CS
   Trimer_CC  11 easgtpssdavSRLEEelrkLqatVQelQkRLDrL 45 
                 ++s +    +v  +E  +r  +  +QelQ  +D+L
  EPX72178.1 791 RPSSITFDKVVTQIEDLIRSQKQKIQELQAEIDKL 825
                 6788999999***********************98 PP

>> zf-C2H2_9  C2H2 type zinc-finger (1 copy)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.7      0.16   3.7e+02      12      51 ..     364     404 ..     360     412 .. 0.72
   2 ?    3.1   0.2     0.039        87      12      29 ..     401     419 ..     396     421 .. 0.88
   3 ?    6.6   0.8     0.003       6.8      26      56 ..     595     625 ..     582     626 .. 0.88

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.16
                 SSHHHHHH.HHHHHTSSS--HHHHHHHHHT-SS---HHHHH CS
   zf-C2H2_9  12 nswkdlse.HilsaasksdaeHvmWLNRniskkrlskdELe 51 
                 +  +d+se  +l+++ +  + H+ +LN  i   +  ++ELe
  EPX72178.1 364 DYTQDISEvQMLKEKLHEAELHIEYLNNQIHDFEDMNNELE 404
                 556777773468899999999******99987665566665 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.039
                 SSHHHHHHHH.HHHTSSS- CS
   zf-C2H2_9  12 nswkdlseHi.lsaasksd 29 
                 n+++dl +Hi +++++k+d
  EPX72178.1 401 NELEDLTNHIeNMENEKND 419
                 5899*************99 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.003
                 SSS--HHHHHHHHHT-SS---HHHHHHHHHH CS
   zf-C2H2_9  26 sksdaeHvmWLNRniskkrlskdELekklek 56 
                  +s +e ++ L +n+ k +l+k+EL++kl++
  EPX72178.1 595 LHSGQETISNLRKNLNKFELEKEELSQKLRE 625
                 6778888999******************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1139 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2425  (0.135256); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                       136  (0.00758548); expected 17.9 (0.001)
Passed Fwd filter:                        84  (0.00468515); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 2.75u 0.43s 00:00:03.18 Elapsed: 00:00:00.79
# Mc/sec: 4349.64
//
Query:       EPX72179.1  [L=295]
Description: coenzyme A diphosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.1e-13   48.4   0.0    1.5e-12   47.7   0.0    1.3  1  NUDIX     NUDIX domain


Domain annotation for each model (and alignments):
>> NUDIX  NUDIX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.7   0.0   8.2e-17   1.5e-12       4     114 ..     122     234 ..     119     247 .. 0.78

  Alignments for each domain:
  == domain 1  score: 47.7 bits;  conditional E-value: 8.2e-17
                 EEEEEEEEETTSE..EEEEEES..SSSTTT.EESSEEECBTTS.HHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEECSGC CS
       NUDIX   4 ravgvvllnekge..vLlvrrs..kkpfpg.WelPgGkvepgE.tpeeAArREleEEtGleaellellgrlhylapydgpygdeheilyvfleevegel 96 
                 ++v + l+n +++  ++l++rs   + ++g  ++PgG+vep + +   AA+RE+ EE+ l ++  ++++r+++l++ d +   ++ ++yv +   +  +
  EPX72179.1 122 ASVLIPLINCEHRacLVLTQRSsyLRSHAGqMCFPGGRVEPSDgSHYYAALRETYEEVDLLPDFFTFVNRIPSLFTKDLR---TEIHSYVAFTIQNNLP 217
                 57889999999999999999998977777779****************************99*********999997654...3344455554444444 PP

                 SSTSTTTEEEEEEEEHHH CS
       NUDIX  97 epndenevsevrwvplee 114
                  ++  +ev++v  +pl+ 
  EPX72179.1 218 SLG-FGEVDKVYCIPLTS 234
                 444.77777775566655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (295 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       385  (0.0214736); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.29s 00:00:00.79 Elapsed: 00:00:00.48
# Mc/sec: 1843.50
//
Query:       EPX72180.1  [L=1318]
Description: meiotically up-regulated 79 protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-07   31.3   0.0    7.1e-07   29.6   0.0    2.0  1  PH_9      Pleckstrin homology domain
    1.1e-06   29.1   0.1    4.2e-06   27.2   0.1    2.1  1  PH        PH domain
    8.7e-06   25.5   1.3    8.7e-06   25.5   1.3    2.8  4  Sec7      Sec7 domain


Domain annotation for each model (and alignments):
>> PH_9  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.6   0.0   1.2e-10   7.1e-07      23     119 .]    1060    1159 ..    1041    1159 .. 0.84

  Alignments for each domain:
  == domain 1  score: 29.6 bits;  conditional E-value: 1.2e-10
        PH_9   23 krgWkevyavlkklvLylykdeeesesaetedlks.lknakllgkirlhhaLaek..asdYkk.kshvFrLqtadgaeylfqtsdakevqeWvdtiN 115 
                     W + +a + ++ Ly+yk  +++ s++++d +  +k++ +   i l+ ++a++  +s  ++ k +   L++    ++lfq+ +   ++eW+++iN
  EPX72180.1 1060 VGPWYKRFAKVSQGKLYIYKL-NMFTSGDLSDAEVwMKHGTIHKEIDLQNTIASVdvPSSCTSrKDNCMMLKIPGDCSILFQVDNILVLNEWIHAIN 1155
                  456999***************.67778888876655899999************9987777666********************************* PP

        PH_9  116 yvAA 119 
                  + AA
  EPX72180.1 1156 FNAA 1159
                  *998 PP

>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.2   0.1     7e-10   4.2e-06      10     102 ..    1049    1156 ..    1039    1159 .. 0.84

  Alignments for each domain:
  == domain 1  score: 27.2 bits;  conditional E-value: 7e-10
                  ETSSSSC......SEEEEEEEEETTEEEEESST...........TCTTESSEEEEEESTTEEEEEEECTT.SSSSTSEEEEEESTSSSTEEEEEEES CS
          PH   10 kgsgkkk......swkkrwfvLkdsellyyknd...........ksekdkepkgsislsncevvevvate.dpkrkfcfelriverngsrtyllqas 88  
                  k   +k+       w kr++ +++++l++yk               +k+ +  ++i+l+n+  + +v ++ ++ +++c +l+i+  +   ++l+q++
  EPX72180.1 1049 KVIPDKNgkwtvgPWYKRFAKVSQGKLYIYKLNmftsgdlsdaeVWMKHGTIHKEIDLQNTIASVDVPSScTSRKDNCMMLKIP--GD-CSILFQVD 1142
                  4444444445555899***************************9999*************99988777777*************..33.78****** PP

                  SHHHHHHHHHHHHH CS
          PH   89 seeerkeWikaiqs 102 
                  +   ++eWi+ai+ 
  EPX72180.1 1143 NILVLNEWIHAINF 1156
                  ************86 PP

>> Sec7  Sec7 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1         1   6.2e+03      98     119 ..     307     334 ..     304     366 .. 0.64
   2 ?   -4.2   0.0       1.9   1.1e+04       4      30 ..     381     409 ..     378     419 .. 0.54
   3 ?    0.2   0.0     0.085   5.1e+02      19      55 ..     614     650 ..     602     671 .. 0.81
   4 !   25.5   1.3   1.5e-09   8.7e-06      33     157 ..     734     862 ..     700     867 .. 0.80

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1
                 HHHHHHHHHHHHHHHHTTC......TCG CS
        Sec7  98 qkierilekFaekyfeqnp......evf 119
                 ++i+ ++ kFa+  ++++p      ++f
  EPX72180.1 307 NQIKDVFTKFASINHSNEPakstetDIF 334
                 5788888888888887666333332333 PP

  == domain 2  score: -4.2 bits;  conditional E-value: 1.9
                 HHHHHHHHHHH-HHHHHHHHHHCCCC..T CS
        Sec7   4 lleeaaekFnkkpkkgikyliekgll..e 30 
                 ++++ ae+F + p+   k ++ +gl   e
  EPX72180.1 381 HVRSLAEQFANTPQFSKKVVETEGLAskE 409
                 55666677777665555555555555432 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.085
                 HHHHHHHCCCCTSSHHHHHHHHHHTCCS-HHHHHHHH CS
        Sec7  19 gikyliekglleedpksiakflketpgldkkklGeyl 55 
                  ik++ +   ++++p++i + l+ +p+l+   + e +
  EPX72180.1 614 EIKKMGNLRSIRAKPQKIGNKLFANPDLKTMDIQETF 650
                 46677777778999***********999988887755 PP

  == domain 4  score: 25.5 bits;  conditional E-value: 1.5e-09
                 HHHHHHHH..HHTCCS-HHHHHHHHCSGGHHHHHHHHHHHCTS--TT--HHHHHHHHCCCS-B-SSHHHHHHHHHHHHHHHHHTTCTC.G-SHHHHHHH CS
        Sec7  33 pksiakfl..ketpgldkkklGeylgkekefnkevlkefvdlfdfsglrldeAlRlflssfrlpgEaqkierilekFaekyfeqnpev.fenadavfvL 128
                 p ++a++l   e+++l   + ++++ +  + ++ev+ +f++  d+++l+l eA ++++ ++   +E     r++  Fa+k+ +qn +  f +++ v  L
  EPX72180.1 734 PAKLAHCLwdLEQNQLLSYNFTDWFVNYFSNKSEVFSNFMSYYDLKNLSLYEAFQTICCDLYYGSEDFMNSRLIRIFANKWLNQNSTFgFLTEEIVLEL 832
                 5555555532333444444555555555455679*************************************************9985425999999*** PP

                 HHHHHHHHHHHC-TTS.CCS--HHHHHHCT CS
        Sec7 129 aysiimLntdlhnpqv.kkkmtledFiknn 157
                   s++ L+ +        + ++ e Fik++
  EPX72180.1 833 LKSLVRLHKETNTRRRmYNYTSAETFIKTT 862
                 ********9987665437888999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1318 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1103  (0.0615204); expected 358.6 (0.02)
Passed bias filter:                      474  (0.0264376); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.89u 0.34s 00:00:01.23 Elapsed: 00:00:00.52
# Mc/sec: 7572.17
//
Query:       EPX72181.1  [L=317]
Description: histone chaperone Rtt106-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.5e-25   89.4   0.1    2.6e-25   88.7   0.1    1.4  1  Rtt106          Histone chaperone Rttp106-like
  ------ inclusion threshold ------
        5.7    6.0  11.1        7.6    5.6  11.1    1.2  1  Astro_capsid_p  Turkey astrovirus capsid protein


Domain annotation for each model (and alignments):
>> Rtt106  Histone chaperone Rttp106-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.7   0.1   2.9e-29   2.6e-25       1      88 [.     166     251 ..     166     252 .. 0.98

  Alignments for each domain:
  == domain 1  score: 88.7 bits;  conditional E-value: 2.9e-29
      Rtt106   1 vgVkasrkakeGlLyflekgllfgfkkPllfiplediesvsfeRvsvtsrtfdlvvelkkeeveFsmidqeelegidefvkskgikik 88 
                 +gV+a++k k+G+Lyfl+kg+l+gf kP+lfi+ +di+   ++  +v +rtf++++e+++++++F+midq+ ++ ++e+ +++g+ ++
  EPX72181.1 166 YGVEANYKNKDGYLYFLKKGVLWGFRKPVLFIETSDIQNFYYS--NVLQRTFSINFEVRDTTISFDMIDQSVFQALNEYATTHGLMDT 251
                 59*****************************************..***************************************9987 PP

>> Astro_capsid_p  Turkey astrovirus capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6  11.1   0.00085       7.6     211     262 ..     262     312 ..     225     317 .] 0.78

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.00085
                     SS--XXXX....XXXX......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Astro_capsid_p 211 ttvpqeralaegederktgaeeeisdpsdeedeevsdeetdtevesdeDedd 262
                     t+ p+++ l e e+++  g+++++sd+++ +d e +de++++e esd+D+++
      EPX72181.1 262 TKNPTSTYLQEAEEDEDNGSDDNYSDAEQVKD-EGKDEDQEQEQESDDDSET 312
                     66677777777888888899999999999998.7788888888888888865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (317 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1059  (0.0590663); expected 358.6 (0.02)
Passed bias filter:                      575  (0.0320709); expected 358.6 (0.02)
Passed Vit filter:                        78  (0.00435049); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.29s 00:00:00.85 Elapsed: 00:00:00.47
# Mc/sec: 2045.36
//
Query:       EPX72182.1  [L=649]
Description: RNA-binding protein Nop9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-13   49.3   0.1       0.22   11.3   0.0    7.2  7  PUF       Pumilio-family RNA binding repeat
     0.0081   15.4   0.9     0.0081   15.4   0.9    2.5  3  SIL1      Nucleotide exchange factor SIL1


Domain annotation for each model (and alignments):
>> PUF  Pumilio-family RNA binding repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.3   0.0   2.5e-05      0.22       9      35 .]     106     132 ..      98     132 .. 0.86
   2 ?    2.7   0.0     0.013   1.2e+02       2      25 ..     135     158 ..     134     161 .. 0.87
   3 !    5.7   0.0    0.0014        13       7      23 ..     268     284 ..     265     292 .. 0.82
   4 ?    3.0   0.0      0.01        92       3      25 ..     317     339 ..     315     344 .. 0.90
   5 !    9.5   0.0   8.9e-05       0.8       5      27 ..     355     377 ..     353     382 .. 0.80
   6 ?   -2.6   0.1      0.61   5.5e+03       2      13 ..     484     495 ..     484     495 .. 0.87
   7 !    6.8   0.0   0.00067         6       3      24 ..     531     552 ..     529     563 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 2.5e-05
                 HHTSTTHHHHHHHHHHHSCHHHHHHHH CS
         PUF   9 LstdqyGnyvvQkllehateeqkklil 35 
                   ++ +G+ v+++++  at++q+k+i+
  EPX72182.1 106 VLNNVFGSKVMEHMFPLATTSQIKSIF 132
                 568**********************97 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.013
                 HGGGHHHHHTSTTHHHHHHHHHHH CS
         PUF   2 ikgnlvqLstdqyGnyvvQklleh 25 
                 + g+ ++ ++  +G+y+ +kll h
  EPX72182.1 135 MNGHYLEVVQTTFGSYAFEKLLSH 158
                 788999999999*********976 PP

  == domain 3  score: 5.7 bits;  conditional E-value: 0.0014
                 HHHHTSTTHHHHHHHHH CS
         PUF   7 vqLstdqyGnyvvQkll 23 
                   +++d+y++ ++Q + 
  EPX72182.1 268 RNYCVDRYASKIMQAFV 284
                 5789**********986 PP

  == domain 4  score: 3.0 bits;  conditional E-value: 0.01
                 GGGHHHHHTSTTHHHHHHHHHHH CS
         PUF   3 kgnlvqLstdqyGnyvvQklleh 25 
                 +++l +L +d  ++++++ ++e+
  EPX72182.1 317 LPFLDTLLKDEAASRILEIIIEK 339
                 799***************99995 PP

  == domain 5  score: 9.5 bits;  conditional E-value: 8.9e-05
                 GHHHHHTSTTHHHHHHHHHHHSC CS
         PUF   5 nlvqLstdqyGnyvvQkllehat 27 
                 ++  L+t++ +n+v+Q+ + +++
  EPX72182.1 355 RFYRLCTHPIANFVMQRYINRLP 377
                 6777************9887655 PP

  == domain 6  score: -2.6 bits;  conditional E-value: 0.61
                 HGGGHHHHHTST CS
         PUF   2 ikgnlvqLstdq 13 
                 i++nl++Ls dq
  EPX72182.1 484 ILNNLLELSHDQ 495
                 6799*****987 PP

  == domain 7  score: 6.8 bits;  conditional E-value: 0.00067
                 GGGHHHHHTSTTHHHHHHHHHH CS
         PUF   3 kgnlvqLstdqyGnyvvQklle 24 
                 ++ +v+Ls+   G+++v kl++
  EPX72182.1 531 SDTIVELSISASGSHIVDKLWK 552
                 6679****************97 PP

>> SIL1  Nucleotide exchange factor SIL1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0      0.41   3.7e+03     153     165 ..     292     304 ..     239     339 .. 0.45
   2 !   15.4   0.9     9e-07    0.0081      98     184 ..     379     462 ..     362     475 .. 0.70
   3 ?    1.1   0.1     0.021   1.9e+02      22      42 ..     477     497 ..     467     533 .. 0.71

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 0.41
        SIL1 153 dkqikikvlelle 165
                 +   k kv+ l+ 
  EPX72182.1 292 QGGKKKKVAPLVD 304
                 2222223333333 PP

  == domain 2  score: 15.4 bits;  conditional E-value: 9e-07
        SIL1  98 kelfeelselskkksdvliKRylsilqeLlqnsefvtkyekkskletLieiyeikdkqikikvlelledllleeeeksevkkrsaee 184
                 +el + ++el++ +++v++K++l +l+ Llq+ + ++ y  +++l +Li   + ++++ k  ++ +l + +++++ ++  +kr+  +
  EPX72182.1 379 EELGHVVQELKQGSDNVVRKSFLAVLKTLLQRCNALQAY--QHDLASLIFA-SAEENEKKKNIIPILLRSKHKRDMSDPENKRKLVN 462
                 4444444555559************************99..5677777544.55666677778888888887777766666666554 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.021
        SIL1  22 dverlekaLddlielshDykf 42 
                   e +e  L++l+elshD  +
  EPX72182.1 477 PKEYVEVILNNLLELSHDQLM 497
                 56778999*********9655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (649 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       746  (0.0416086); expected 358.6 (0.02)
Passed bias filter:                      522  (0.0291148); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.31s 00:00:00.93 Elapsed: 00:00:00.45
# Mc/sec: 4327.91
//
Query:       EPX72183.1  [L=94]
Description: hypothetical protein SOCG_04876 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-23   82.5   2.6    3.5e-23   82.4   2.6    1.0  1  DUF1764   Eukaryotic protein of unknown function (DUF1764)


Domain annotation for each model (and alignments):
>> DUF1764  Eukaryotic protein of unknown function (DUF1764)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.4   2.6     2e-27   3.5e-23      10     100 .]       2      94 .]       1      94 [] 0.83

  Alignments for each domain:
  == domain 1  score: 82.4 bits;  conditional E-value: 2e-27
     DUF1764  10 eideifseskkkkkekekeeeee...ekekkkkskkkkkkkkkkeeekkfedse.skkrrktedGlpvYteeeLgigkadgGgtplCPFdCeCCF 100
                 eid+ifs++k++ k + + e+e+   e ++ ++s+ +k kk  ++ ++ f d++ s+ r++te+G+ vY+ +eL++g+  gG+tp+CPFdC+CC+
  EPX72183.1   2 EIDDIFSQKKTQPKGNGSGEKEQnkqEPKHPENSRPSKPKKGGSKGDDLFLDPKgSSGRKRTEEGFLVYDLDELQMGR--GGDTPQCPFDCDCCY 94 
                 8**********99999888777744334444566666667777777888888888999********************..**************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       611  (0.0340789); expected 358.6 (0.02)
Passed bias filter:                      306  (0.0170673); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.29s 00:00:00.73 Elapsed: 00:00:00.48
# Mc/sec: 586.25
//
Query:       EPX72184.1  [L=560]
Description: transcription factor Ace2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.2e-05   25.5  19.1     0.0016   18.8   3.0    4.0  3  zf-C2H2      Zinc finger, C2H2 type
      2e-05   24.8   7.1      0.007   16.7   0.1    3.3  3  zf-H2C2_2    Zinc-finger double domain
    8.1e-05   22.5   4.1     0.0054   16.7   0.1    2.7  2  zf-C2H2_6    C2H2-type zinc finger
    0.00022   21.8  16.6     0.0063   17.2   1.7    4.0  3  zf-C2H2_4    C2H2-type zinc finger
  ------ inclusion threshold ------
      0.057   13.7   1.7       0.17   12.2   1.7    1.8  1  zf-C2H2_8    C2H2-type zinc ribbon
       0.12   12.7   0.1       0.12   12.7   0.1    3.0  3  zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
        1.7    9.1   8.3       0.42   11.1   0.2    3.1  3  zf-met       Zinc-finger of C2H2 type
        2.1    8.2   5.4       0.69    9.8   2.3    1.8  2  GAGA         GAGA factor


Domain annotation for each model (and alignments):
>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   2.3     0.018        40       2      23 .]     473     496 ..     472     496 .. 0.83
   2 !   18.8   3.0   7.2e-07    0.0016       1      23 []     502     524 ..     502     524 .. 0.99
   3 !   10.5   0.4   0.00031      0.69       5      21 ..     533     549 ..     530     550 .. 0.92

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.018
                 EET..TTTEEESSHHHHHHHHHCC CS
     zf-C2H2   2 kCp..dCgksFkrksnLkrHirtH 23 
                 +C    C k+ +rk+n ++Hi+tH
  EPX72184.1 473 VCLfnSCCKRIRRKYNIESHIQTH 496
                 566666778899***********9 PP

  == domain 2  score: 18.8 bits;  conditional E-value: 7.2e-07
                 EEETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                 y+C++C+  F r ++LkrH+r+H
  EPX72184.1 502 YRCEICKAGFVRHHDLKRHLRIH 524
                 9*********************9 PP

  == domain 3  score: 10.5 bits;  conditional E-value: 0.00031
                 TTTEEESSHHHHHHHHH CS
     zf-C2H2   5 dCgksFkrksnLkrHir 21 
                 +C+k+F+r + L+rH +
  EPX72184.1 533 ECSKRFNRLDALNRHKQ 549
                 6**************86 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.1   3.1e-06     0.007       3      25 ..     490     512 ..     488     513 .. 0.91
   2 !   10.8   0.6   0.00023      0.52       1      18 [.     516     535 ..     516     540 .. 0.82
   3 ?   -2.7   0.1       4.4   9.9e+03       1       6 [.     543     548 ..     543     550 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 3.1e-06
   zf-H2C2_2   3 rrHirkHtgekpyeCplCdkaFk 25 
                 + Hi +H +++py C+ C+  F+
  EPX72184.1 490 ESHIQTHLSDRPYRCEICKAGFV 512
                 68*****************9997 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00023
   zf-H2C2_2   1 nLrrHirkHtgekpy..eCp 18 
                 +L+rH+r H + +py  eC+
  EPX72184.1 516 DLKRHLRIHENGRPYicECS 535
                 69*************66665 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 4.4
   zf-H2C2_2   1 nLrrHi 6  
                 +L+rH 
  EPX72184.1 543 ALNRHK 548
                 79***6 PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.0   1.1    0.0056        13       2      24 ..     502     524 ..     502     526 .. 0.88
   2 !   16.7   0.1   2.4e-06    0.0054       6      21 ..     533     548 ..     530     551 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0056
   zf-C2H2_6   2 heCsvCsksFpslqaLggHkksH 24 
                 ++C +C++ F    +L  H++ H
  EPX72184.1 502 YRCEICKAGFVRHHDLKRHLRIH 524
                 99********9999999998877 PP

  == domain 2  score: 16.7 bits;  conditional E-value: 2.4e-06
   zf-C2H2_6   6 vCsksFpslqaLggHk 21 
                 +Csk+F+ l+aL+ Hk
  EPX72184.1 533 ECSKRFNRLDALNRHK 548
                 8**************9 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   1.9      0.12   2.7e+02       1      23 [.     472     496 ..     472     497 .. 0.88
   2 !   17.2   1.7   2.8e-06    0.0063       1      23 [.     502     524 ..     502     525 .. 0.97
   3 !    9.7   0.3   0.00078       1.8       2      21 ..     531     549 ..     530     550 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.12
   zf-C2H2_4   1 fkCpi..CgksFsskkaLlrHlkth 23 
                 f C +  C+k+ ++k+++ +H++th
  EPX72184.1 472 FVCLFnsCCKRIRRKYNIESHIQTH 496
                 667777799***************9 PP

  == domain 2  score: 17.2 bits;  conditional E-value: 2.8e-06
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlkth 23 
                 ++C+iC++ F ++++L+rHl+ h
  EPX72184.1 502 YRCEICKAGFVRHHDLKRHLRIH 524
                 89*******************99 PP

  == domain 3  score: 9.7 bits;  conditional E-value: 0.00078
   zf-C2H2_4   2 kCpiCgksFsskkaLlrHlk 21 
                 +C  C+k+F++ +aL+rH +
  EPX72184.1 531 IC-ECSKRFNRLDALNRHKQ 549
                 66.8**************76 PP

>> zf-C2H2_8  C2H2-type zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   1.7   7.6e-05      0.17      33      88 ..     469     523 ..     440     529 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 7.6e-05
   zf-C2H2_8  33 gklfrcstascaetfpsmqelvahtklhykpnryfkcencllrfrthrslfkhlhv 88 
                   +f c   sc++ +    ++ +h + h   +r ++ce c   f  h  l +hl +
  EPX72184.1 469 DGKFVCLFNSCCKRIRRKYNIESHIQTHLS-DRPYRCEICKAGFVRHHDLKRHLRI 523
                 45799**********************985.7889******************987 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.3       3.8   8.6e+03      18      23 ..     387     392 ..     387     392 .. 0.88
   2 ?   12.7   0.1   5.3e-05      0.12       2      22 ..     502     522 ..     501     522 .. 0.94
   3 ?    0.8   0.5       0.3   6.7e+02       6      21 ..     533     548 ..     532     549 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 3.8
                  HCCTTS CS
  zf-C2H2_jaz  18 dnHlkS 23 
                  +nH+kS
   EPX72184.1 387 KNHEKS 392
                  79**98 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 5.3e-05
                  CBBTTTTBBBSSHHHHHCCTT CS
  zf-C2H2_jaz   2 fYCvlCdKyFksenaldnHlk 22 
                  + C++C+  F  +++l+ Hl+
   EPX72184.1 502 YRCEICKAGFVRHHDLKRHLR 522
                  89*****************96 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.3
                  TTTBBBSSHHHHHCCT CS
  zf-C2H2_jaz   6 lCdKyFksenaldnHl 21 
                  +C+K F+   al  H+
   EPX72184.1 533 ECSKRFNRLDALNRHK 548
                  6******999999996 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.5       3.2   7.1e+03       6      21 ..     479     494 ..     478     496 .. 0.81
   2 ?   11.1   0.2   0.00019      0.42       1      21 [.     502     522 ..     502     525 .. 0.93
   3 ?    2.1   0.1      0.13   2.8e+02       6      21 ..     534     549 ..     533     549 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 3.2
      zf-met   6 CnvtfnsesqlksHlq 21 
                 C ++   + + +sH q
  EPX72184.1 479 CCKRIRRKYNIESHIQ 494
                 8888888888999987 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.00019
      zf-met   1 fyCelCnvtfnsesqlksHlq 21 
                 + Ce+C+  f    +lk Hl+
  EPX72184.1 502 YRCEICKAGFVRHHDLKRHLR 522
                 78******************8 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.13
      zf-met   6 CnvtfnsesqlksHlq 21 
                 C ++fn   +l+ H q
  EPX72184.1 534 CSKRFNRLDALNRHKQ 549
                 9*************76 PP

>> GAGA  GAGA factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.1       5.7   1.3e+04      32      39 ..     395     402 ..     394     402 .. 0.84
   2 ?    9.8   2.3   0.00031      0.69       4      46 ..     481     523 ..     478     530 .. 0.82

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 5.7
                 -EESSHHH CS
        GAGA  32 AviRqsRn 39 
                 Av Rqs n
  EPX72184.1 395 AVQRQSPN 402
                 999**977 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00031
                 ---S-SS-----CCCCTTS--EE-TTT--EESSHHHHHHHHHH CS
        GAGA   4 kvikrkdgllkiksksqsEqPAtCPiCqAviRqsRnLRRHLEL 46 
                 k+i rk  ++   +   s+ P  C iC+A      +L+RHL +
  EPX72184.1 481 KRIRRKYNIESHIQTHLSDRPYRCEICKAGFVRHHDLKRHLRI 523
                 566777777776677789************9999******976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (560 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       384  (0.0214178); expected 358.6 (0.02)
Passed bias filter:                      250  (0.0139439); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 3849.61
//
Query:       EPX72185.1  [L=150]
Description: ribosomal-ubiquitin fusion protein Ubi3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.4e-34  115.3   0.6    7.4e-34  115.3   0.6    1.8  3  ubiquitin      Ubiquitin family
    1.6e-24   85.8   2.6    1.6e-24   85.8   2.6    1.8  1  Ribosomal_S27  Ribosomal protein S27a
    4.6e-16   58.4   0.7    4.6e-16   58.4   0.7    1.5  2  Rad60-SLD      Ubiquitin-2 like Rad60 SUMO-like
    1.1e-05   25.7   0.5    0.00012   22.5   0.1    2.5  2  Ubiquitin_2    Ubiquitin-like domain
    0.00082   19.5   0.4     0.0018   18.3   0.4    1.6  1  Rad60-SLD_2    Ubiquitin-2 like Rad60 SUMO-like
     0.0039   17.5   0.5     0.0075   16.6   0.0    1.6  2  Ubiquitin_5    Ubiquitin-like domain
     0.0054   16.6   0.0     0.0078   16.1   0.0    1.3  1  TBK1_ULD       TANK binding kinase 1 ubiquitin-like domain
  ------ inclusion threshold ------
       0.01   16.4   0.6      0.014   15.9   0.6    1.2  1  DUF2407        DUF2407 ubiquitin-like domain
      0.017   15.2   1.0        5.6    7.1   0.2    2.5  2  Ubiquitin_4    Ubiquitin-like domain
      0.018   15.1   0.1      0.029   14.5   0.1    1.4  1  DUF2318        Predicted membrane protein (DUF2318)
       0.12   11.8   0.1       0.17   11.3   0.1    1.3  1  DUF4925        Domain of unknown function (DUF4925)
       0.17   12.1   1.7       0.27   11.4   1.1    1.6  2  Auto_anti-p27  Sjogren's syndrome/scleroderma autoantigen 1 (
       0.57    8.8   2.6         11    4.5   0.2    2.2  2  Plexin_cytopl  Plexin cytoplasmic RasGAP domain


Domain annotation for each model (and alignments):
>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.3   0.6   5.4e-37   7.4e-34       1      72 []       3      74 ..       3      74 .. 0.99
   2 ?   -3.0   0.1       4.6   6.3e+03      23      31 ..      90      98 ..      85     108 .. 0.58
   3 ?   -2.7   0.0       3.8   5.2e+03      54      64 ..     103     113 ..      99     117 .. 0.76

  Alignments for each domain:
  == domain 1  score: 115.3 bits;  conditional E-value: 5.4e-37
                EEEEETTSEEEEEEEETTSBHHHHHHHHHHHHTSSGGGEEEEETTEEE-TTSBHGGHTTSTTEEEEEEESSC CS
   ubiquitin  1 itvktldgkkitleveesdtveelKekiaekegipaeqqrLiysGkvLedertleeygiqdgstlhlvlrlr 72
                i+vktl+gk+itleve+sdt++++K ki++kegip++qqrLi++Gk+Led rtl++y+iq++stlhlvlrlr
  EPX72185.1  3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74
                9********************************************************************986 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 4.6
                HHHHHHHHH CS
   ubiquitin 23 elKekiaek 31
                ++K+k  + 
  EPX72185.1 90 KIKHKHKKV 98
                455544433 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 3.8
                 HGGHTTSTTEE CS
   ubiquitin  54 leeygiqdgst 64 
                 l++y+++d+  
  EPX72185.1 103 LKYYKVEDDGS 113
                 67888888754 PP

>> Ribosomal_S27  Ribosomal protein S27a
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.8   2.6   1.2e-27   1.6e-24       1      45 []     102     145 ..     102     145 .. 0.99

  Alignments for each domain:
  == domain 1  score: 85.8 bits;  conditional E-value: 1.2e-27
                    SSSSCCESSSSSEEESS-B-SS-S-TTSBEEECTTEEEESSTTTE CS
  Ribosomal_S27   1 vlkyYkvddsgkverlrkeCpreCGaGvfMAehkdRkyCGkCglT 45 
                    vlkyYkv+d+g+v+rlr+eCp+ CGa vfMA+h dR yCG+C+lT
     EPX72185.1 102 VLKYYKVEDDGSVKRLRRECPT-CGASVFMANHGDRLYCGRCHLT 145
                    8*********************.*********************9 PP

>> Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.4   0.7   3.3e-19   4.6e-16       1      72 []       1      71 [.       1      71 [. 0.98
   2 ?   -2.8   0.1       4.1   5.7e+03      39      43 ..      94      99 ..      83     110 .. 0.56

  Alignments for each domain:
  == domain 1  score: 58.4 bits;  conditional E-value: 3.3e-19
                EEEEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEEETTEE--TTSBGGGSS--TTEEEEEEX CS
   Rad60-SLD  1 ikiilkgkdgkevkikVkptttvskLieayrkkkgipeeqkvrLiFDGeeLdpnstvedldiedgdtidvvi 72
                ++i++k+ +gk+++++V+++ t+ +++++ ++k+gip+ +++rLiF G++L++  t+ d+ i++++t+++v+
  EPX72185.1  1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPP-DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 71
                89************************************.******************************986 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 4.1
                -.TT-E CS
   Rad60-SLD 39 e.qkvr 43
                + +kv+
  EPX72185.1 94 KhKKVE 99
                223333 PP

>> Ubiquitin_2  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.1   8.7e-08   0.00012      16      80 ..      13      69 ..       2      70 .. 0.86
   2 ?   -0.2   0.0         1   1.4e+03      62      75 ..      98     111 ..      80     115 .. 0.69

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 8.7e-08
                 EEEEEETTSBHHHHHHHHHHHH---TTCEEEEEE.-SSSSEEECSSGCCSBCCCCT--TTEEEEE CS
  Ubiquitin_2 16 serrfsksltieelKekLelitGtspasmrLqlyddkkdnevsklddddalLgsYgvkdgmrihV 80
                  +  +++s+ti+++K+k++   G++p+++rL +          k  +d ++L++Y+++  +++h 
   EPX72185.1 13 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFA--------GKQLEDGRTLSDYNIQKESTLHL 69
                 55678899************************99........5667899*********9999995 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 1
                  GCCSBCCCCT--TT CS
  Ubiquitin_2  62 dddalLgsYgvkdg 75 
                   + a L++Y+v+d 
   EPX72185.1  98 VELAVLKYYKVEDD 111
                  46778999999885 PP

>> Rad60-SLD_2  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.4   1.3e-06    0.0018      16     104 ..      13      89 ..       2      98 .. 0.68

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 1.3e-06
                  EEEEEETT-BHHHHHHHHHHHS-TT-SSS--SCCCEEEEETTEEE-TTSBCCCCS-TTTTTTTS-EEEEEEE---SS----.XX....XXXXX CS
  Rad60-SLD_2  16 gpvkfsdaatvaelkekviaqWPkdkeekpksvndlklilaGkiLennktlkelrlplgevkggvtvmHvvvrenlsekksekk....akkak 104
                    ++ ++++t++++k k+     +dke  p  +++ +li aGk Le+ +tl++++++        +++H+v+r     kk++kk        k
   EPX72185.1  13 ITLEVESSDTIDNVKSKI-----QDKEGIP--PDQQRLIFAGKQLEDGRTLSDYNIQKE------STLHLVLRLRGGGKKRKKKtyttP---K 89 
                  556667777777777777.....4555533..34559*****************54433......579***998877777766643322...3 PP

>> Ubiquitin_5  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   5.4e-06    0.0075      34      93 ..      13      73 ..       5      78 .. 0.83
   2 ?   -0.7   0.1       1.3   1.8e+03      33      38 ..      82      87 ..      63     110 .. 0.49

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 5.4e-06
  Ubiquitin_5 34 klletkLdvtgkelvskiaeefglkensiKlilngklleldktLeeQgvknnskv.mvLkl 93
                  +le++ + t +++ ski ++ g+  ++ +li  gk+le ++tL + +++++s + +vL+l
   EPX72185.1 13 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLhLVLRL 73
                 5566666677889999999*****99***********************999875467765 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 1.3
  Ubiquitin_5 33 kkllet 38
                 kk+  t
   EPX72185.1 82 KKTYTT 87
                 222222 PP

>> TBK1_ULD  TANK binding kinase 1 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   5.6e-06    0.0078      19      53 ..      17      51 ..       4      71 .. 0.86

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 5.6e-06
    TBK1_ULD 19 ihpyntvaifqeevakqTkiaaekQellfeghrll 53
                +++ +t++++  +++++  i++++Q l+f g++l 
  EPX72185.1 17 VESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLE 51
                6789****************************973 PP

>> DUF2407  DUF2407 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.9   0.6     1e-05     0.014      14      72 ..      13      82 ..       6     109 .. 0.69

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 1e-05
     DUF2407 14 leLdipdpntttvagLkqliRerlpaelasrrLrLIyaGrlLedttslasslklpees...............v 72
                ++L+++  ++ t+ ++k  i ++    +   + rLI+aG+ Led  +l++   ++e++               +
  EPX72185.1 13 ITLEVE--SSDTIDNVKSKIQDKE--GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTlhlvlrlrgggkkrkK 82
                566666..6789999999999987..67777789**************98655554445777777665554431 PP

>> Ubiquitin_4  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.2    0.0041       5.6       1      32 [.       1      32 [.       1      36 [. 0.94
   2 ?    6.5   0.0    0.0063       8.7      58      86 ..      43      70 ..      39      73 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0041
  Ubiquitin_4  1 lkvtvkkldgeslevvvkqnatvkdLkkaier 32
                 +++ vk l g+++ ++v+++ t+ ++k  i+ 
   EPX72185.1  1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD 32
                 7899*************************997 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0063
  Ubiquitin_4 58 LsfegekLkddkaklkeygirnkselsFv 86
                 L+f g++L+ d  +l++y i+++s+l+ v
   EPX72185.1 43 LIFAGKQLE-DGRTLSDYNIQKESTLHLV 70
                 889999986.6789************976 PP

>> DUF2318  Predicted membrane protein (DUF2318)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.1   2.1e-05     0.029      12      63 ..      92     148 ..      80     150 .] 0.78

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 2.1e-05
     DUF2318  12 eadgkevrflvvk....ksdgklrvaldaCevCekkgYv.qegeelvCknCgvrfal 63 
                 +++ k+v++ v+k    + dg+++     C  C+ + ++ ++g++l C +C  +++l
  EPX72185.1  92 KHKHKKVELAVLKyykvEDDGSVKRLRRECPTCGASVFMaNHGDRLYCGRCHLTLKL 148
                 4456667776665333356889999999**********9899*********999876 PP

>> DUF4925  Domain of unknown function (DUF4925)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   0.00012      0.17      49     125 ..      39     114 ..       3     133 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00012
     DUF4925  49 eedeYtFsGtsvteagatvkYsGsitkkalkLdlnvtmanakelaktYklselvkgkkkivdtsggeytwketdnev 125
                 +++  +F+G+++  + +   Y+   ++ +l+L l ++ + +k   ktY+ ++ +k k+k+v+ +  +y   e d+ v
  EPX72185.1  39 DQQRLIFAGKQLEDGRTLSDYNI-QKESTLHLVLRLRGGGKKRKKKTYTTPKKIKHKHKKVELAVLKYYKVEDDGSV 114
                 77888999999987777688874.4678999*************************************999999887 PP

>> Auto_anti-p27  Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       7.8   1.1e+04       4      14 ..      47      57 ..      46      59 .. 0.76
   2 ?   11.4   1.1    0.0002      0.27      16      39 ..     119     142 ..     117     143 .. 0.75

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 7.8
  Auto_anti-p27  4 gelLlkGwtML 14
                   g+ L  G t+ 
     EPX72185.1 47 GKQLEDGRTLS 57
                   78899998886 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.0002
  Auto_anti-p27  16 etCpvCgvPLmrdrkggkvyCvaC 39 
                      Cp+Cg+  +   +g ++yC +C
     EPX72185.1 119 RECPTCGASVFMANHGDRLYCGRC 142
                    68****6555555567899**999 PP

>> Plexin_cytopl  Plexin cytoplasmic RasGAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.2    0.0082        11     200     223 ..       9      32 ..       1      36 [. 0.83
   2 ?    4.1   0.2     0.011        15     271     313 ..      54      95 ..      39     120 .. 0.61

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.0082
                    ---EEEEEEETT-BHHHHHHHHHH CS
  Plexin_cytopl 200 esekvevkvldcDtitQvkeKild 223
                      ++++++v + Dti+ vk+Ki d
     EPX72185.1   9 TGKTITLEVESSDTIDNVKSKIQD 32 
                    567899***************976 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.011
                    -BTTTTT--TTEEEEEE-T........................ CS
  Plexin_cytopl 271 nTlahYkvsdgavlalvkkqseessalnssllskvekssssks 313
                     Tl++Y+++ +++l+lv + +   ++ ++++ ++ +k + +k+
     EPX72185.1  54 RTLSDYNIQKESTLHLVLRLRGGGKKRKKKTYTTPKKIK-HKH 95 
                    588888888888888888876666555554444432222.221 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1030  (0.0574488); expected 358.6 (0.02)
Passed bias filter:                      645  (0.0359752); expected 358.6 (0.02)
Passed Vit filter:                        94  (0.0052429); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 962.11
//
Query:       EPX72186.1  [L=224]
Description: hmmtag2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.3e-25   88.7   6.0    2.3e-25   88.7   6.0    2.2  3  MMtag            Multiple myeloma tumor-associated


Domain annotation for each model (and alignments):
>> MMtag  Multiple myeloma tumor-associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.7   6.0   1.3e-29   2.3e-25       1      78 []      10      91 ..      10      91 .. 0.96
   2 ?   -2.6   0.4      0.38   6.9e+03      56      64 ..     117     125 ..     105     138 .. 0.45
   3 ?   -1.9   0.5      0.24   4.2e+03      56      56 ..     172     172 ..     145     210 .. 0.57

  Alignments for each domain:
  == domain 1  score: 88.7 bits;  conditional E-value: 1.3e-29
       MMtag  1 GsRGGrdqfkwedvksskhrenYLGhSlkapvGrwqkgkDldwyakekkkeeeeee....erkeelkkikeaeeealaeaLG 78
                G+RGG+++f+w++vk +k++ nYLG+S+ a+ Grw++g+Dl+w++k++++++e+ +    + ++e+ +ik++e+ ++aeaLG
  EPX72186.1 10 GTRGGQGEFQWDQVKGDKQKGNYLGQSIYAASGRWAQGRDLEWWSKGRTTQAESGSnnedAYRKEILEIKHKEQTMIAEALG 91
                9***********************************************999887667777999******************9 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.38
       MMtag  56 eerkeelkk 64 
                 ++ ++  ++
  EPX72186.1 117 QRSDSHHRR 125
                 122222222 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 0.24
       MMtag  56 e 56 
                  
  EPX72186.1 172 Y 172
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1055  (0.0588432); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 1520.76
//
Query:       EPX72187.1  [L=805]
Description: glucosidase I Gls1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   6.9e-176  585.8   9.2   6.3e-175  582.6   9.2    2.0  1  Glyco_hydro_63   Glycosyl hydrolase family 63 C-terminal doma
    8.8e-62  209.2   0.0    2.9e-61  207.5   0.0    1.8  2  Glyco_hydro_63N  Glycosyl hydrolase family 63 N-terminal doma
    7.5e-06   25.0   0.1    1.4e-05   24.2   0.1    1.3  1  Trehalase        Trehalase


Domain annotation for each model (and alignments):
>> Glyco_hydro_63  Glycosyl hydrolase family 63 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  582.6   9.2    1e-178  6.3e-175       2     491 .]     298     803 ..     297     803 .. 0.96

  Alignments for each domain:
  == domain 1  score: 582.6 bits;  conditional E-value: 1e-178
                     -HHHHHHHHHHHHHHHHHHHHHH----S--S-HHHHHHHHHHHHHHHHHT-EEEEEEEEE--SS--.-TT--S---..................E CS
  Glyco_hydro_63   2 tgeelseklekkkkefeekfekkFklkekldlekeelklakealsnllGgigyfyGdslvkresvl.eedefvkyk..................p 77 
                     t+e +++++e+++k+f +kf++ F lk ++d ++e++++a+ a++nl+G++g+f Gds+v++   + ++++++ ++                  +
      EPX72187.1 298 TEELITKAIEENHKDFSSKFQEVFPLKYPYDENPEYQRFAEFAFANLFGNVGFFEGDSIVSKTPIEpDDEDYEFMQgfesakeklsentaffdkE 392
                     678899******************************************************98744436667777778888888899999999999 PP

                     EEEEE--SBTTTB-SEEHHHHHHHHHHHHHH-HHHHHHHHHHHHTT--TT----SEE--HHHHHTTS-GGGTEE-TT-----HHHHHHHHHHHHH CS
  Glyco_hydro_63  78 aeLftavPsRpfFPRGFlWDeGFhqllilkwdvdltleilasWldlinedGWipReqilgaearskvPeefvvqkpeianPPtlllalkkllekl 172
                     ++L ta+PsR++FPRGF+WDeGFh+l+i  wd+d++leil+sW++l+ne+GW++Reqilg+earskvP+ef++q+p+ianPPtl+lalk ++ekl
      EPX72187.1 393 RHLLTAIPSRSHFPRGFYWDEGFHLLPIGLWDNDFSLEILKSWFSLVNEEGWVGREQILGSEARSKVPDEFQTQYPDIANPPTLILALKAYIEKL 487
                     *********************************************************************************************** PP

                     H......................---HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHTB---STT.........B--TT--SS.......--GGGS CS
  Glyco_hydro_63 173 k......................lekvsekekeklleflkklyprlkkwfewfrktqkGkleet.........yrWrGRdatakrelnpktLasG 236
                     k                      l++vs +++e   +fl++l+p + +++ewfrktq+G+++++         yrWrGR+++       ++LasG
      EPX72187.1 488 KeqgnkksfndvgsdysledldyLRSVSVSNPEMSIQFLRELFPLMLRHYEWFRKTQHGDFDTWeresfsdegYRWRGRTYQ-------HCLASG 575
                     ***********************99*********************************************************.......****** PP

                     -TTS---SS--TT-B-HHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHTTEETTTTEE-EEEE-T................... CS
  Glyco_hydro_63 237 lDDyPRashpseaelhvDlrsWvalaakslksiaellgeeeekekyaktekelsenleklhwseeekayaDlgvhtekvklkkkevegqkkelvr 331
                     lDDyPRa++ps+aelhvDl+sW++ ++ksl  +ae+lge+ee+ek+ak+e ++ +nl++lhw++e+++y+D +v++                   
      EPX72187.1 576 LDDYPRAQPPSVAELHVDLLSWMTSFTKSLRFVAEFLGESEEAEKLAKNEYAMLRNLDDLHWDDEAQTYCDASVDQ------------------- 651
                     **************************************************************************77................... PP

                     ..TTSS-EEEE---BHHHHHHHHTT-S-TT-THHHHHHHHHH-TTTTEETTEEBSB-TTSTTTT-.....TT-SSSS-B-HHHHHHHHHHHHHH- CS
  Glyco_hydro_63 332 vveeepelqlvealGYvslfPlllklldadsekleklldlikdpeelwsdyGlrslskksslygkrntehdenYWrgpiWininylilsalkhys 426
                       +++p  ++++++GYvsl+Pl+l+ll+adsekl+ +l++i+d++elws+yG+rsls +++++g+     denYWrgp+W+n+nyl+ls+l++++
      EPX72187.1 652 --YDDP--SYICHKGYVSLLPLMLGLLPADSEKLTITLNMIRDESELWSPYGIRSLSLNDPYFGT-----DENYWRGPVWMNMNYLVLSSLYQNY 737
                     ..4455..57*******************************************************.....*********************8755 PP

                     .--SS-.--HHHHHHHHHHHHHHHHHHHHHHHTSS--SEE-TTT--EESSSS-TTGGGGHHHHHH- CS
  Glyco_hydro_63 427 .kvegpykekakeiykeLrsnlvnnivkqyketGfvweqYddktGkgkgakeFtGWtslvvlimae 491
                      +v+gp +  ak+iy+eLr n+vn +++++k+tG++weqYd  tG g+++k+FtGWt+++v+im+e
      EPX72187.1 738 iHVPGPSQGLAKSIYEELRLNVVNTVFNNWKRTGIFWEQYDSVTGVGQRTKDFTGWTTVIVNIMSE 803
                     5***************************************************************96 PP

>> Glyco_hydro_63N  Glycosyl hydrolase family 63 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  207.5   0.0   4.8e-65   2.9e-61       1     224 [.      41     258 ..      41     261 .. 0.93
   2 ?   -1.7   0.1      0.42   2.5e+03      54      72 ..     771     789 ..     752     798 .. 0.77

  Alignments for each domain:
  == domain 1  score: 207.5 bits;  conditional E-value: 4.8e-65
  Glyco_hydro_63N   1 SLlWGpYrpnlYfGlrpRipkslltGLmWfkvddyasvqkklrhtceqgdglkkygWeeyDgrtgGkqtikDkennldlttsfvKvkdgegGsW 94 
                      SLlWGpYrpnlY G+rp++p+sl++GLmW++vddya+++ klrh++e+gd++ k+gW++yD+r+gG+q+i+D  ++++l t+fvK+++g+   W
       EPX72187.1  41 SLLWGPYRPNLYVGIRPKVPNSLMSGLMWANVDDYARFS-KLRHRAEHGDDIGKFGWTSYDVRRGGQQVIEDLLMGIKLVTEFVKLPHGN---W 130
                      8**************************************.9*********************************************9886...* PP

  Glyco_hydro_63N  95 avrvkgkpredak.kaktsvvfYiglegegsleleeedekglegdvkleGeskelgefkleitegpktnkhpesnhkse.kekplsktlvlslk 186
                      a+r++g+p+ +a+ + +t+++fY+  +geg+lel+ ++     ++v +eG++++lg+f++++ +  +  +hp++++ ++ ++  ++k  +++ +
       EPX72187.1 131 ALRIHGTPLPGAPeDLTTALFFYAYVNGEGNLELKATS----PKKVFMEGQTPDLGKFRIHTYN--RMGQHPTTSRVEDlESTAMDKDYYAGFQ 218
                      ************999******************99543....4689****************99..588999999999977788********** PP

  Glyco_hydro_63N 187 vpdenvwkakdillselkesvqaliekygke..kklpppa 224
                      +++++vw++ +ill  l+++++ l e+ + +  ++lpp++
       EPX72187.1 219 INSKEVWQTSEILLYLLDTKMKVLSEHGNMNslDDLPPAY 258
                      **********************999966555554477655 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.42
  Glyco_hydro_63N  54 kygWeeyDgrtgGkqtikD 72 
                      +  We+yD  tg  q  kD
       EPX72187.1 771 GIFWEQYDSVTGVGQRTKD 789
                      5568888888887777777 PP

>> Trehalase  Trehalase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.1   2.3e-09   1.4e-05     305     481 ..     590     782 ..     570     796 .. 0.80

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 2.3e-09
                 E-HHHHHHHHHHHHHHHHCCCHCC-CCHHHHHHHHHHHHHHHHHHHCEETTTTEE--EETTTTEE----BG...GGGHHHHCT-S-HHHHHHHHHHCHH CS
   Trehalase 305 vpvDLNallyklekdiaefedklgdsetseefeekaekrkkaidkvLWneeagvylDYdlkkkkqtnyesa...tnlvpLwaglaskeqaaklvakvle 400
                 + vDL + +    k + ++++ lg+se++e+  ++  +  +++d+  W++ea++y D  + +    +y+      +l+pL +gl   ++  ++ +  l+
  EPX72187.1 590 LHVDLLSWMTSFTKSLRFVAEFLGESEEAEKLAKNEYAMLRNLDDLHWDDEAQTYCDASVDQYDDPSYICHkgyVSLLPLMLGLLPADS--EKLTITLN 686
                 579**********************************************************99888888652226899********999..56666778 PP

                 HHCCCCCEESCCCC-SBSSS.....-.SSTTSTTEEEHHHHHHHHHHHHH.TT-.........HHHHHHHHHHHHHHHHHHHHHCTSEBSCEETTST CS
   Trehalase 401 kleesgllvaegglgtsllk.....s.grQWDyPngWaPlqilavegler.yge.........eelaerlaerwlktvtkafsdegklvEKYdvtre 481
                  +++  +l ++ g+   +l+     + ++ W  P +W  + +l++  l + y +         +++ e+l  + ++tv++ ++++g+  E Yd  + 
  EPX72187.1 687 MIRDESELWSPYGIRSLSLNdpyfgTdENYWRGP-VWMNMNYLVLSSLYQnYIHvpgpsqglaKSIYEELRLNVVNTVFNNWKRTGIFWEQYDSVTG 782
                 8888888888****99999885554324557666.79999999999986415447888855555555667778899****************97753 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (805 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       463  (0.0258241); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.30s 00:00:00.96 Elapsed: 00:00:00.44
# Mc/sec: 5500.38
//
Query:       EPX72188.1  [L=438]
Description: isocitrate dehydrogenase Idp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.7e-73  247.8   0.0      2e-73  247.6   0.0    1.0  1  Iso_dh       Isocitrate/isopropylmalate dehydrogenase
  ------ inclusion threshold ------
       0.17   11.6   0.0       0.38   10.6   0.0    1.5  1  Rbx_binding  Rubredoxin binding C-terminal domain


Domain annotation for each model (and alignments):
>> Iso_dh  Isocitrate/isopropylmalate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  247.6   0.0   2.2e-77     2e-73       2     348 .]      36     426 ..      35     426 .. 0.93

  Alignments for each domain:
  == domain 1  score: 247.6 bits;  conditional E-value: 2.2e-77
                 EEEEEESTTHHHHHHHHHHHHHHHHHHHT-EEEEEE---THHHHHHHSSSS-HHHHHHHHHSSEEEEEE---CSSSSSSHHHHHHHHHHHTT.EEEEEE CS
      Iso_dh   2 iallegdgiGpevveaalkvlkaakekaglelefeevdvGgaaidetgeplpeetleaikeadvvllgavgtpkekevrpengLlaLrkeld.lfanlr 99 
                 + ++ ++++G+e++++++++++++   +++++++ ++d+G +a+d+t ++++ ++++ai + dv +++a++tp+e+ v+ +n L++++k+++ +++n++
  EPX72188.1  36 VKNPVVEMDGDEMTRVIWQIIREKLVLPYMNIKLDYYDLGIEARDKTSDKITVDAANAIIKHDVGVKCATITPDEARVQEYN-LKKMWKSPNgTIRNIL 133
                 667889********************************************************************77777777.********99****** PP

                 EEE-B.CCTTCCSSBTHHHHCT.-EEEEEEE-SSCGGCSSEEEEET.......................TG.GGGEEEEEEEEEHHH.HHHHHHHHHHH CS
      Iso_dh 100 pvkvf.eklkvksplkrevvee.vdlvivReltggiYfgeekekkg.......................sifteevavdtklyseee.ieriaraafel 172
                 +++vf e++  ++++k  ++++ + ++i R+++g++Y  ++  ++g                       +   +  +v + +y++++ i+ +a+ +f++
  EPX72188.1 134 NGTVFrEPILINNIPKY-IPGWtKPICIGRHAFGDQYKSTDMIASGpgllemsftpknneaakqthnvyE--FSGPGVAMSMYNTDDsIRGFAHSSFQM 229
                 *****999999999995.9***899*******************99****************99996431..4456999******998999******** PP

                 HHHTTTSEEEEEESTTTTHHHH.HHHHHHHHHHCC......TTTTSEEEEEEHHHHHHHHHHSGGGGS.EEEE-HHHHHHHHHHHHHHTTSGCC-EEEE CS
      Iso_dh 173 AlkrgkkkvtlvdKanvlksse.lwrkiveevaee......eypdielehqlvDsaamqlvkspkqfd.VivtkNlfGDilSDeaaalvGslGllpSas 263
                 Al++ k +++l++K+++lk+++ +++++++e++++      e  +++++h+l+D++++q++ks    + V+++kN++GD++SD++a+  GslGl++S+ 
  EPX72188.1 230 ALQK-KMPLYLSTKNTILKQYDgRFKDTFQEIYDSdykgefEKLGLWYQHRLIDDMVAQAIKSN--GGfVWACKNYDGDVMSDVVAQAYGSLGLMTSVL 325
                 ****.*****************************988887777789*****************9..445****************************** PP

                 EET.SS-EEEEESS---CCCTTSS-......S-THHHHHHHHHHHHHTTT-HHHH......HHHHHHHHHHHHHTSCCHHHCTTS...TCCCHHHHHHH CS
      Iso_dh 264 lge.kkvaifEavHGsapdiagkdk......aNpiavilSaalmLryslgleeaA......dkiekAvekvleagivTkDlagea...akevstsefgd 346
                 + + +++   Ea+HG++ ++  ++       +N+ia+i+++++ L+ +  l+++       +++e+A+ + +++gi+TkDl   +   +++v t ef d
  EPX72188.1 326 IHPnGRTFESEAAHGTVQRHYMQHLqgkktsTNSIASIFAWTRGLAQRGRLDNNEplinfsNALERACVNCVQKGIMTKDLCILSpdvNEYVDTFEFLD 424
                 **988999***********998887788889***************987777776889999*********************99999999*******99 PP

                 HH CS
      Iso_dh 347 av 348
                 av
  EPX72188.1 425 AV 426
                 97 PP

>> Rbx_binding  Rubredoxin binding C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   4.3e-05      0.38      20      62 ..     186     230 ..     184     238 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 4.3e-05
  Rbx_binding  20 vappakgaegeWq..ietdgeglrarfrdaegqllGFaltgeavk 62 
                  ++p++++a+ + +  +e +g g+ + ++++++ ++GFa +  +++
   EPX72188.1 186 FTPKNNEAAKQTHnvYEFSGPGVAMSMYNTDDSIRGFAHSSFQMA 230
                  56666666544443369*********************9876555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (438 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       386  (0.0215294); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 3273.17
//
Query:       EPX72189.1  [L=735]
Description: nuclear cap-binding complex large subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.9e-79  265.9   2.6    1.9e-79  265.9   2.6    1.7  2  MIF4G_like     MIF4G like
    4.4e-30  105.1   4.5    4.4e-30  105.1   4.5    1.9  2  MIF4G_like_2   MIF4G like
     0.0087   15.7   3.0      0.018   14.7   0.3    2.6  3  MIF4G          MIF4G domain
  ------ inclusion threshold ------
       0.33   10.6   3.9          1    8.9   2.0    2.5  2  PI3K_P85_iSH2  Phosphatidylinositol 3-kinase regulatory subun


Domain annotation for each model (and alignments):
>> MIF4G_like  MIF4G like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.1       1.9   8.4e+03      54     103 ..      56     106 ..      49     112 .. 0.66
   2 !  265.9   2.6   4.3e-83   1.9e-79       1     191 []     310     499 ..     310     499 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 1.9
  MIF4G_like  54 klkdldppestwkledvvveavlsellqlptp.ekklvyyhsllteickla 103
                 +++ +  + s+ + e+  v+a+l  +l+ + + + k+++  +l++ ++  a
  EPX72189.1  56 DINYVAMSVSRESHEEENVSAILNCILETALSiPIKIAHLATLMMRAALKA 106
                 555566677788888888888888888766432556666666666555555 PP

  == domain 2  score: 265.9 bits;  conditional E-value: 4.3e-83
  MIF4G_like   1 Pdasslaavllrdilvdvinllevnrkeaakllldldlyltkktfalratsvdklkdldppestwkledvvveavlsellqlptpekklvyyhslltei 99 
                 P++ ++a++++rd+ vd+in+le nr eaa++l+dld+y+t+ktfalr+t+ ++l +ld +es+wk+ed+++ea++sell+  +++ k+vyyhsllte+
  EPX72189.1 310 PETLNIASSIFRDVTVDIINHLEYNRMEAAQILTDLDVYFTYKTFALRGTPIAELPKLDAEESRWKVEDIITEAIFSELLTT-KSTFKPVYYHSLLTEC 407
                 77889**************************************************************************986.6789************ PP

  MIF4G_like 100 cklaPkavaPslGrairllyaalssldvelierfldWfshhlsnfgftWkWkeWvedvelpalhPrkvfikrviekeirlsyadriketlPd 191
                 c++aPk++aP++Gr ir++++ +++l++e+ e+f++Wfshhlsnf+f WkW+eW+ ++el++ hP+kvf++++i ke+ lsy +ri+++lP+
  EPX72189.1 408 CRVAPKILAPTFGRIIRFVFNISENLPLETFEKFINWFSHHLSNFNFFWKWQEWIGNIELEDFHPKKVFMRETIAKELELSYWSRIHDSLPE 499
                 *******************************************************************************************7 PP

>> MIF4G_like_2  MIF4G like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1      0.21   9.4e+02     211     231 ..     432     452 ..     430     463 .. 0.79
   2 !  105.1   4.5   9.8e-34   4.4e-30       4     181 ..     517     687 ..     515     720 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.21
  MIF4G_like_2 211 elflivferlveilsesleel 231
                   +l l +fe+++++ s +l++ 
    EPX72189.1 432 NLPLETFEKFINWFSHHLSNF 452
                   566789***********8664 PP

  == domain 2  score: 105.1 bits;  conditional E-value: 9.8e-34
  MIF4G_like_2   4 edeslPfaaeaqelldlirkkapaeevlelldeikesaeeegsieadpdslsidvfvqtllhvGskSlSHvlsaierykevLkel.aeseearaqil 99 
                   edes+P++++ +e++d +r  +p e v++ l++++e+ +++           +  ++ +  ++GskSlSH+ +  e+ ++v+k++  es + +++ +
    EPX72189.1 517 EDESNPLHSNFKEITDHLRIHKPIEVVSSSLSSVEENPSSQV--------SGVRFLMACAYSLGSKSLSHASNTFEKHLDVIKHFsRESLSTEMEAI 605
                   799*********************************997774........56899******************************8899******** PP

  MIF4G_like_2 100 eavmrfWknnpqmaiiivdkLlnyqivepasVvewifskeknegltrayvwEllkrtlskvnkrvkkvrqeleelkkkeeee 181
                   + ++++W+++p +a+i + k+lny+iv+ +sV+ w+++++ +  ++++++w l+++ l+k+  r ++v+ + e+lk+  +e 
    EPX72189.1 606 DELFSCWRSQPSIAVIWLSKMLNYSIVSITSVFRWLLEQKDSSIWAKSWTWSLMHMSLEKMDARLENVNSDDENLKELIRES 687
                   ****************************************************************666655554444432222 PP

>> MIF4G  MIF4G domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.3     4e-06     0.018      30     190 ..      64     215 ..      36     249 .. 0.70
   2 ?   -1.9   0.0      0.47   2.1e+03      16      51 ..     583     617 ..     545     632 .. 0.75
   3 ?   -0.2   0.0      0.14   6.3e+02      21      44 ..     678     700 ..     660     723 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 4e-06
                 S.....CHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHC-S-HHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEHH CS
       MIF4G  30 d.....dknelkevielifekaveepsfsplyarlcgklnsrfqqnFrikllnklqeefekryeleneleenedgnrrrrlglvrflgelfklkmltsk 123
                       +++  + ++++i e+a+++p ++ ++a+l ++ + + +   +++ ++ l+  + +      +le+ ++ + + +  l+++l+ ++ ++ ++  
  EPX72189.1  64 VsreshEEENVSAILNCILETALSIPIKIAHLATLMMRAALKAP-LLVERGVEILHSKLVS------SLEQYDYYQAKIVFRLLICLSRIYESEGVEP- 154
                 444445678999********************************.7666667777777777......9999999999999999999999998887777. PP

                 HHHHHHHHHHHGGCCCCSCCHSCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCH CS
       MIF4G 124 illdclkellssltketaddppqdleeieilltllttigktlennekakkeldqffkriqkiledat 190
                 i  + l++l ++         +  ++ ++i+l  +++     + ++++ ++++ +++r  +++e ++
  EPX72189.1 155 IFTKLLDRLGEQTAP-----SVFGDKLLKIILINIPYYCVASK-HPEKVALVEDWIQRSASYVELRK 215
                 444444444444322.....45556666666666666666655.66666666666666666666655 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.47
                 HHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCGG CS
       MIF4G  16 fevlikqllklamdddknelkevielifekaveeps 51 
                 fe++++ +  +  ++  ++ +e i+ +f++++++ps
  EPX72189.1 583 FEKHLDVIKHFSRES-LSTEMEAIDELFSCWRSQPS 617
                 444444444444444.57788888888888888886 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.14
                 HHHHHHHHCSCHHHHHHHHHHHHH CS
       MIF4G  21 kqllklamdddknelkevielife 44 
                 + l +l+ ++ k+e+++v++l+f+
  EPX72189.1 678 ENLKELIRES-KEEKDTVLNLLFT 700
                 5556666776.9999*****9997 PP

>> PI3K_P85_iSH2  Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.3     6e+03      80      97 ..     517     534 ..     481     547 .. 0.75
   2 ?    8.9   2.0   0.00023         1      58     119 ..     577     692 ..     571     697 .. 0.75

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.3
  PI3K_P85_iSH2  80 ehEieklqenleqlksrl 97 
                    e E + l++n+++++++l
     EPX72189.1 517 EDESNPLHSNFKEITDHL 534
                    677788888888888887 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00023
  PI3K_P85_iSH2  58 neaikmFeeqiklqekfskea.........q.............................................ehEieklqenleqlksrlke 99 
                    ++a + Fe ++ ++  fs+e          +                                             +   + ++ +le++ +rl++
     EPX72189.1 577 SHASNTFEKHLDVIKHFSRESlstemeaidElfscwrsqpsiaviwlskmlnysivsitsvfrwlleqkdssiwakSWTWSLMHMSLEKMDARLEN 672
                    67788899999999999999966655555504445555566666666666666677777777777777777777667777899************* PP

  PI3K_P85_iSH2 100 lhsskekLeedlkqqkeeer 119
                    ++s  e+L+e +++ kee+ 
     EPX72189.1 673 VNSDDENLKELIRESKEEKD 692
                    ***************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (735 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       596  (0.0332422); expected 358.6 (0.02)
Passed bias filter:                      407  (0.0227007); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.64u 0.25s 00:00:00.89 Elapsed: 00:00:00.43
# Mc/sec: 5164.25
//
Query:       EPX72190.1  [L=365]
Description: FAD-dependent amino acid oxidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.7e-35  121.1   0.0    1.4e-34  120.3   0.0    1.4  1  DAO             FAD dependent oxidoreductase
     0.0032   16.8   0.0       0.82    8.8   0.0    2.1  2  Pyr_redox_2     Pyridine nucleotide-disulphide oxidoreductase
  ------ inclusion threshold ------
       0.01   15.8   0.0       0.13   12.3   0.0    2.2  2  NAD_binding_9   FAD-NAD(P)-binding
      0.068   13.4   0.0       0.14   12.4   0.0    1.5  1  NAD_binding_8   NAD(P)-binding Rossmann-like domain
        0.1   11.4   0.0        3.1    6.5   0.0    2.1  2  Trp_halogenase  Tryptophan halogenase


Domain annotation for each model (and alignments):
>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.3   0.0   3.8e-38   1.4e-34       3     352 .]      10     352 ..       8     352 .. 0.75

  Alignments for each domain:
  == domain 1  score: 120.3 bits;  conditional E-value: 3.8e-38
                 EEECTSHHHHHHHHHHHHT...T.....EEEEESSSSTTSSGGGSSEEEEESSSSTHHSTHHHHHHHHHHHHHH.HHHHHHHSSTTSEEEEEEEEEESS CS
         DAO   3 viiGGGiiGlstAyeLarr...g.....VtllekgdiagsgaSgrnsgllhsglrylpeaselarlslealeel.releeelgididyrrtGllslaad 92 
                 +i+G Gi+G++t ++L+++   +     V+++e++ +++sg+S+  s+l++s++   ++   l ++s   ++ l ++++++++  +++r          
  EPX72190.1  10 IIVGCGIVGICTSFYLTEHelyKqgsmeVIIIESN-EVASGSSSIPSALITSQWQ-NENLRVLTEVSVKMHQQLnDRYDGKNN--WGFRYVEPW----- 99 
                 8***************9985551569*********.7777**************7.676535669999999999999999987..777733333..... PP

                 HHHHHHHHHHHHHHHHTTTTEEEEEHHHHHHHSTTSTTTSEEEEETTEEEE.EHHHHHHHHHHHHHHTT-EEEESECEEEEEEEETCEEEEE...EECT CS
         DAO  93 eeelealdkllallleagldaelldaeevrelepalpgllgalfypdtgqv.dpakltaalaraaealGveilegtevtgleeedgkvwgve...rttp 187
                    l +++k  ++ +++      +++e +++ +         l+++++ ++ + +k++ +l +++ ++Gv+i++g +vt+++++  +v+ +    +t++
  EPX72190.1 100 ---LMNFKKFNENISKLPEHFDCFSEEHLQKCS--------KLGDKNDFIIiNGRKFCSFLFERITERGVKIIYG-KVTDVKNN--RVHYIPkgcNTSD 184
                 ...444433333433233222578887555555........36799998888***********************.*****764..6777757654443 PP

                 EEEEEEEEEEE--GGGHH.HH..HTT.CTT.......TSEEEEEEEEEEEEEECCTHSTGSGCSEEEEEEEETTTTEEEEEETTSEEEEEESSE...EE CS
         DAO 188 gendaadavVnaaGawsd.ll..gll.kel.......dlpispvrgqvlvlkplseklvspaailpvpetdddgrgvyvtprkdgrvlvGgtad...ee 272
                  ++  ad+v ++aGaw++  l      + l       dl+   ++g+v v  +++         l++p+ ++++  v+++   +  ++ G+t     + 
  EPX72190.1 185 TIILNADKVCVSAGAWTGyVLpyS-GiGCLfaqslllDLKDCETKGYVAVC-NVN---------LQNPDFSERSLEVHFIENIKA-FVTGSTLFiplPK 271
                 44435699**********766322.23333444445555555577777666.332.........233448888999999999844.7778887787666 PP

                 TTCSSTSCSHHHHHHHHHHHHHHSGG..GCGEEEEEEEEEE.E.TTSSEEEEEEETEEEEEEEEECTTTHHHHHHHHHHHHHHH CS
         DAO 273 sgdddpevdeedidellealrklfPq..lgdvlrkwaGlrp.l.pdglpligetpgvkglylatGhsghGltlapatGkllael 352
                 +++d  +++++++ +l e    l+ +  +++v  + + ++p + + g p +  +   +g+y+a+Gh ++G+t++patG ++ael
  EPX72190.1 272 ENEDI-RINSHHLMDLKETFDLLLAEkkKSEVIDCTYAFLPlNrVTGIPSLSIS--RSGIYFAAGHASWGITQGPATGLWMAEL 352
                 66666.******************88434779997778***6357999998885..57************************97 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.0   0.00023      0.82       2      70 ..       8     113 ..       7     140 .. 0.68
   2 !    5.4   0.0    0.0025         9     188     237 ..     148     199 ..     138     205 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00023
                  SEEEE--SHHHHHHHHHHHH......HTS-EEEEETTHCHHHCSHHHHCHHHHHHHHHHHHH...............................HHHHC CS
                  xxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...............................xxxxx RF
  Pyr_redox_2   2 dvvviGgGpAGlaaaltlaq......agakvtlvelegtclnggcllskallgvaedaeias...............................evvkk 62 
                  +++++G G+ G+ ++ +l +       +++v+++e+++   +   ++s  +++  ++++ +                                 ++kk
   EPX72190.1   8 RCIIVGCGIVGICTSFYLTEhelykqGSMEVIIIESNEVASGSSSIPSALITSQWQNENLRVltevsvkmhqqlndrydgknnwgfryvepwlMNFKK 105
                  56888999999988888888777654588888887777777777777777777766666666777777666666666666666666666666644555 PP

                  HHHHCCCC CS
                  xxxxxxxx RF
  Pyr_redox_2  63 lnqgiell 70 
                  +n++i +l
   EPX72190.1 106 FNENISKL 113
                  55555555 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.0025
                  HHHHHHHHTTEEEEESCEEEEEEETTEEEE...EEETTSCEEEESEEEE-S-E CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 188 aleealekeGvevklgtsvkeidgngekle...vvledgeeidadlvvvavGv 237
                  +l e+++++Gv++  g++ +++++n  ++      ++d   ++ad v+v++G 
   EPX72190.1 148 FLFERITERGVKIIYGKV-TDVKNNRVHYIpkgCNTSDTIILNADKVCVSAGA 199
                  6668999*******7765.5***999833355677777777*********995 PP

>> NAD_binding_9  FAD-NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   3.5e-05      0.13       2      39 ..      11      49 ..      10      81 .. 0.90
   2 ?    1.1   0.0       0.1   3.6e+02     101     154 ..     147     198 ..     100     199 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 3.5e-05
  NAD_binding_9  2 ivGaGprGlavlerLlara.kkkspleitlfdpsepgag 39
                   ivG+G+ G+++   L +++  k+ ++e+ +++ +e  +g
     EPX72190.1 11 IVGCGIVGICTSFYLTEHElYKQGSMEVIIIESNEVASG 49
                   9*******************9************987544 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.1
  NAD_binding_9 101 rdlfeellarlpegvtvevhraevvdleeradgq..avlladg.aslaadaVvLAlG 154
                    + lfe++++r      v+++ ++v+d+++++ ++  + + +++   l ad+V +  G
     EPX72190.1 147 SFLFERITERG-----VKIIYGKVTDVKNNRVHYipKGCNTSDtIILNADKVCVSAG 198
                    55555555554.....89999*******99988766555555404569999988776 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0     4e-05      0.14       1      36 [.      11      52 ..      11      64 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 4e-05
                   EE--SHHHHHHHHHHHCC......TEEEEEE-SSSSSSGGG- CS
  NAD_binding_8  1 IvGaGlsGlvaAylLaka......gfdvlllekrdrlGGraa 36
                   IvG G+ G ++  +L+++        +v ++e+++  +G ++
     EPX72190.1 11 IVGCGIVGICTSFYLTEHelykqgSMEVIIIESNEVASGSSS 52
                   9***************87555555559********9999875 PP

>> Trp_halogenase  Tryptophan halogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.0   0.00086       3.1       2      48 ..       9      55 ..       8     131 .. 0.78
   2 ?    3.0   0.0      0.01        37     153     185 ..     142     174 ..     138     191 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.00086
                    EEEE--SHHHHHHHHHHHHH.T.TTS.SEEEEEE-SSS---SS-EE--TH CS
  Trp_halogenase  2 ivivGGGtaGwlaAaalaka.l.kgk.levtlveseeigtvgvGeatips 48
                     +ivG G+ G  +  +l ++ l k+  +ev ++es+e+     G ++ips
      EPX72190.1  9 CIIVGCGIVGICTSFYLTEHeLyKQGsMEVIIIESNEVA---SGSSSIPS 55
                    58**************98642223335*********986...47777776 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.01
                     HHHHHHHHHHHHHHCT-EEEE--EEEEEE-TTS CS
  Trp_halogenase 153 aalyakfLrrvaearGvtrvegkvvevqldedg 185
                      +++  fL +  ++rGv+++ gkv++v+ +   
      EPX72190.1 142 GRKFCSFLFERITERGVKIIYGKVTDVKNNRVH 174
                     578999*********************987655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (365 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       548  (0.030565); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 2511.33
//
Query:       EPX72191.1  [L=1213]
Description: TRAPP complex subunit Trs120 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     9e-258  858.1  18.5   1.2e-257  857.7  18.5    1.1  1  TRAPPC9-Trs120  Transport protein Trs120 or TRAPPC9, TRAPP II
     0.0013   19.0   0.2     0.0046   17.2   0.2    2.0  1  TPR_12          Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.064   13.4   0.9       0.14   12.4   0.1    1.9  2  TPR_2           Tetratricopeptide repeat
      0.085   12.7   2.0      0.087   12.7   0.1    1.9  2  TPR_1           Tetratricopeptide repeat
       0.09   12.7   0.1       0.36   10.8   0.0    2.0  2  TraI_2_C        Putative conjugal transfer nickase/helicase T
       0.12   12.4   0.0       0.39   10.7   0.0    1.9  1  Y_Y_Y           Y_Y_Y domain


Domain annotation for each model (and alignments):
>> TRAPPC9-Trs120  Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  857.7  18.5  3.9e-261  1.2e-257       2    1155 ..       6    1105 ..       5    1171 .. 0.88

  Alignments for each domain:
  == domain 1  score: 857.7 bits;  conditional E-value: 3.9e-261
  TRAPPC9-Trs120    2 lsfiaParvrvLlvPigkikrsrFlsfverlraenevrLlDvtpd.srpnrnmFsPlafpnGrilydlstsvpdeehlfLedFEpfRktfvvi 93  
                      +sf+aP+r++ L+ P+gk+kr+rF +f+++lr+ ++++L+D+    ++++++ F+Plafp Gri+y+++t+++d ++  Le+FE+fR++fv i
      EPX72191.1    6 FSFVAPSRIQSLVRPFGKVKRHRFHTFLNLLRRVSHIQLSDIPVGrATKKSSSFNPLAFPLGRIIYNFTTTLDD-QQSLLEEFEYFRRIFVFI 97  
                      79****************************************877788999*********************77.5689************** PP

  TRAPPC9-Trs120   94 giadgseekdledleqeleelkekypkalvhnlivfdtpee.kaa.lpeevilvpsseesksttlktimcDitsnlLaeldslaksyqaiptl 184 
                      g++dgsee+d ++l+++l++++++ p+a v ++++fd+p+e +++  + +++l p+s++s ++  ++i+cDit++lL+e++sl+ s++a +++
      EPX72191.1   98 GVVDGSEEQDFSQLQSSLDAWQRRVPHASVAKCLIFDCPQEsEEVfQDPRFLLGPRSNSSVNSITRSILCDITAELLEEFSSLEFSLHARSVI 190 
                      ***************************************77566657777******************************************* PP

  TRAPPC9-Trs120  185 rSPgsitgssvlkktlqkesrssss.dkaqkRlsmpvasgssstpttfdeisrsvagl.gsssasersrqrgkGRqskllGnlyLlAGrypdA 275 
                       SP   t+  +l+  +    r++s  + ++ R s    ++ +s +t++        ++ + s ++ers++ +kGR+++ lG+lyLlAGr+p+A
      EPX72191.1  191 LSPI--TEMPHLAPLQ----RTNSVsSMHSPRSS---ITTPMSRTTSIP-------SVrSVSAVTERSKSLSKGRIENQLGQLYLLAGRLPNA 267 
                      ****..4433443332....22111133333444...122222222222.......3347799****************************** PP

  TRAPPC9-Trs120  276 LkefteaatlakklsDylWlgsALEgilvcllLlaylgvdfqipssicqpskdklsslkssssesssrrksleslpellkellekilslYers 368 
                      Lk+f++a++++k++sDylW+g +LE ++vcl+L+a+l++d+qip+ i+++  +        ++ ++  + +l+ l ++++e  ++i +lY +s
      EPX72191.1  268 LKHFANAIAITKSTSDYLWQGLSLELLTVCLMLMAQLHIDVQIPQNIISMFPSYI------DRFNEHGPLKLDFLFSFITETRNTIDQLYHKS 354 
                      ********************************************88888888776......68899999************************ PP

  TRAPPC9-Trs120  369 lndteesvPqlvysesvlRllkllvavhlrggslndealehiVkgkasepleekeskekprlavlfskseIasllfkafplqlkdlslvdqir 461 
                      + ++++s+P l++ses+lR+++ll++v++++g l+d+al+hi+ +   +pl     ++k+  ++++sk++I++++ +a   +l++ls+ +++r
      EPX72191.1  355 TLQPNDSIPGLCFSESILRFSHLLTIVYICNG-LTDTALNHIISQ---SPLR----TSKSYSSYIPSKATIYQWIIRARGQHLNSLSIRENCR 439 
                      *****************************999.9***********...6663....45567789***************************** PP

  TRAPPC9-Trs120  462 IlsglAsvlssLgleRKkAfvlrellvslipgleqarkvgaaevg..ihpaAg.aldlgegdqeesirellellleiYgikeaeveriledas 551 
                      I+ ++A++l+++g++R+++ +lre+l  ++p + +++k+  ++++  ++++A  ++  g+ ++  +i  l+ +++e +g+     + ++ + +
      EPX72191.1  440 IYGAMANMLGTIGFHRQRSKMLREMLHNITPAIMESKKQIISKSDfpVENTAMhTASSGNFQTGFDILPLILEVCEEFGLL--RLDGTVLNPE 530 
                      *********************************998887666655115666665667777778888999************..5777777888 PP

  TRAPPC9-Trs120  552 lrsfgwlsLqievLrlcinisealpDfegvlkftvllLtryshllpkdeQvrLleniertvaaakklglkelaeYWDpfLvrgvklleesesk 644 
                      + ++gw+sLq++v++++++++eal+D++++lk+++l++t +  + ++ +Q+ L ++++++++ a++lg++  ++YWDpf++++ ++  +++ +
      EPX72191.1  531 ITKWGWTSLQFDVVNELVSFCEALSDYQAILKLISLFFTFLPSHSTSAQQIYLHKTFRKICSFASNLGMPFQTPYWDPFMIMDMEYSGHPDFE 623 
                      89************************************************************************************9988776 PP

  TRAPPC9-Trs120  645 ipieeskselkkatkeeeksekdpfiynPFkkkkkastkakekllvadEkaefkvtLqNPfefeveiesieletegvefealkeslvigpkst 737 
                      +p   +   +k+a k+++ + + pfiynPF k  k+++ +k k+lvadE   f v L+NPf f v+i++i+l tegve+  +   ++++p +t
      EPX72191.1  624 EPKLIH---MKGA-KTDSFQGRSPFIYNPFLK--KNTEIHKTKTLVADELIFFNVYLRNPFHFSVDIQEIHLYTEGVEVIHSVCMTTLRPLTT 710 
                      665555...2233.344455789*********..444445689************************************************** PP

  TRAPPC9-Trs120  738 qkltltgkptesgelkitgckikvlgcrereFpifkkekwkp...kkek..kikrtglaakekkserr.........petkslslkVipeQPe 816 
                      + +tl+++p ++g+l+++gc++kv+gc+++  + ++++k+k       +  kikr+  + ++ +  +          ++ +sl+++Vi++QP+
      EPX72191.1  711 EIITLSITPLKAGTLNVRGCNVKVFGCKPSVQYFYNQQKQKDalhI--SleKIKRNFDEMRSTNVAKHqwnsvpelpINSESLNFQVIEKQPK 801 
                      *****************************99999999866654442..14455555443333333332455566666**************** PP

  TRAPPC9-Trs120  817 lelkstsltqsavMlLeGekktfsitLeNkSstavdflsfsfqDstienlqkalknkelsaaelYelElqllkkkalrilnkdeekktikPge 909 
                      l + s +++ + + l e+e+ ++  t+eN S+t++ ++ +sf+D + + +q+  ++k+++a+ lYel+ + ++ ++++++n  e++ +++Pge
      EPX72191.1  802 LIVSSRKFSINNLNLAEYETGELIYTIENVSNTKATHVRISFEDNASKVYQQLKSDKNITADVLYELQQEEYQMPTFEVKN--EQPFSLEPGE 892 
                      ***********************************************999999999*************************..99******** PP

  TRAPPC9-Trs120  910 eatfeievlgkkglteatiqidYaylgkksseesekfytrqlsipltvtVnasielvrcdilplsessksasadkqlsellseeskkekdsdy 1002
                      + +++++v +k+   e+ti+++ +   ++s++e+ +fy r+l++p+++++ ++i l+++ +lp  +                      kd +y
      EPX72191.1  893 KREIQVNVIAKPISGEGTIVFESS---CRSNDEH-NFYARHLKVPIKLNLSKRITLSNWSVLPDIH----------------------KDPNY 959 
                      ************************...7776655.9******************************......................6789* PP

  TRAPPC9-Trs120 1003 cLlllDlrNsWpnplsvsleveeksedefeveetiepgktsRlilpikrislkeedlhkpIPsLnrnrQFVvsas.kiseeeeramreaFWyR 1094
                      c+lllD+ N+ ++ l+v ++ +   e e   ++ ++p++   ++l++ r+ ++ee+l+k+IP+L + +QFV s + k s ++ +a ++ FW++
      EPX72191.1  960 CMLLLDFYNHHSDSLKVLIKEK---ETESIESKLVKPKADHIFFLRLARFRISEEELSKDIPNL-SSKQFVLSEGmKKSLKNIQALKRRFWVK 1048
                      ********************96...5556678999*****************************.6*******99999*************** PP

  TRAPPC9-Trs120 1095 eelLkrlkgtWkessskreGeidlRsirltsrmvdalkledieievslekeeeeqtgrskf 1155
                      ++lL+ +++ W++++++r+G++++++  lt+ m+  l l +++i +sl+++ +     ++ 
      EPX72191.1 1049 QHLLETIQAFWESDDQDRHGQVHMKNHSLTDDMTRLLLLPSVQILTSLQQNGKM----ASR 1105
                      *************************************************99876....333 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.2   1.5e-06    0.0046       4      55 ..     249     298 ..     246     304 .. 0.91

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 1.5e-06
      TPR_12   4 talnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrly 55 
                 ++ n+l+++++ +gr+  Al+++  a++i +++   d+++   +l  L  ++
  EPX72191.1 249 RIENQLGQLYLLAGRLPNALKHFANAIAITKST--SDYLWQGLSLELLTVCL 298
                 57889****************************..9*****99999997775 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   4.6e-05      0.14       5      31 ..     252     278 ..     250     280 .. 0.92
   2 ?   -3.0   0.1       3.7   1.1e+04      19      30 ..     552     563 ..     552     563 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 4.6e-05
       TPR_2   5 ynlGlayyklgdyeeAleafekAleld 31 
                 ++lG++y+ +g++  Al++f  A+++ 
  EPX72191.1 252 NQLGQLYLLAGRLPNALKHFANAIAIT 278
                 579*********************985 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 3.7
       TPR_2  19 eAleafekAlel 30 
                 eAl ++++ l+l
  EPX72191.1 552 EALSDYQAILKL 563
                 89*****99997 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   2.9e-05     0.087       5      30 ..     252     277 ..     249     277 .. 0.92
   2 ?   -2.6   0.2         2   6.1e+03      19      30 ..     552     563 ..     552     563 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 2.9e-05
                 HHHHHHHHHTT-HHHHHHHHHHHHHH CS
       TPR_1   5 ynlGnayfklgkydeAleyyekALel 30 
                 ++lG++y+  g++  Al+++  A+ +
  EPX72191.1 252 NQLGQLYLLAGRLPNALKHFANAIAI 277
                 89*********************976 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 2
                 HHHHHHHHHHHH CS
       TPR_1  19 eAleyyekALel 30 
                 eAl +y+  L+l
  EPX72191.1 552 EALSDYQAILKL 563
                 89*****99987 PP

>> TraI_2_C  Putative conjugal transfer nickase/helicase TraI C-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1       2.7     8e+03      45      77 ..     744     775 ..     733     784 .. 0.63
   2 ?   10.8   0.0   0.00012      0.36      16      54 ..    1155    1192 ..    1151    1203 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 2.7
                 HHHHHHHHHHHHTT-TT-TTEEEEEEB--HHHH CS
    TraI_2_C  45 rYaqealakeedkekwkkvqkrfeklklhrkkk 77 
                  Y q+  +k+  + +++k+ ++f ++++ +  k
  EPX72191.1 744 FYNQQ-KQKDALHISLEKIKRNFDEMRSTNVAK 775
                 33333.555555777888888888887765544 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00012
                  TT-S-BSSSS-SEEEETTEEEEETTTHHHHHHHHHHHHH CS
    TraI_2_C   16 trklkiNtakAkvHvVeegvfLvsPgiFkrYaqealake 54  
                  + ++++ ++    H+Ve + f  sPgi++ Y++  + ++
  EPX72191.1 1155 EATISVSEKASTSHIVERTFFALSPGIYQIYISA-ISEK 1192
                  6789999999999*******************99.4443 PP

>> Y_Y_Y  Y_Y_Y domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00013      0.39      15      53 ..    1151    1194 ..    1149    1202 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00013
                  ETTESSEEEESSTS......EEEEES--SEEEEEEEEEEETTS- CS
       Y_Y_Y   15 egidkeWveasdysq.....easytnlppGdYtlkVkakdndgq 53  
                  +g d+  ++ s+  +     e ++  l+pG Y+++++a++++++
  EPX72191.1 1151 DGPDEATISVSEKAStshivERTFFALSPGIYQIYISAISEKNE 1194
                  555666665555555568999*****************998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1213 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       743  (0.0414412); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.84u 0.32s 00:00:01.15 Elapsed: 00:00:00.52
# Mc/sec: 6961.29
//
Query:       EPX72192.1  [L=271]
Description: 20S proteasome component alpha 6 subunit Pre5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.7e-47  160.3   0.0    4.5e-47  160.0   0.0    1.1  1  Proteasome      Proteasome subunit
    1.1e-12   47.3   0.0    2.8e-12   46.0   0.0    1.7  1  Proteasome_A_N  Proteasome subunit A N-terminal signature


Domain annotation for each model (and alignments):
>> Proteasome  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  160.0   0.0     5e-51   4.5e-47       1     190 []      29     215 ..      29     215 .. 0.97

  Alignments for each domain:
  == domain 1  score: 160.0 bits;  conditional E-value: 5e-51
                 HHHS-EEEEEEETTEEEEEEEEEEEETTEEEESSSSTSEEEEETTEEEEEEESHHHHHHHHHHHHHHHHHHHHHHSSGTCHHHHHHHHHHHHHHHHHHC CS
  Proteasome   1 vkkGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigvafaGlaaDartlvrraraeaqlyrlrygrpipverlvarvaaklqaytqrs 99 
                 +k+G+++vG+ ++ ++vl+a kr+    +l s+ + +K+++iddh+g+a+aGla+Dar+l +++++ea + +  + rpipv+rl++rva+k+q +tq++
  EPX72192.1  29 IKQGSATVGVVSNTHAVLVALKRNA--EEL-SSYQ-KKLIRIDDHLGIAIAGLAPDARVLSNYMKQEAMSSKTLFSRPIPVRRLLNRVAEKAQLNTQQY 123
                 699**********************..888.9997.*************************************************************** PP

                 TTTTTSEEEEEEEEETTTEEEEEEEETTSEEEEESSEEEESTTHHHHHHHHHHHH..STTBSHHHHHHHHHHHHHHHH.HHBTTSCSSEEEEEE CS
  Proteasome 100 grrpfgvslliagvdeeggpeLyqidpsGsyieekdavaiGsgseaaktalekey..kedltleeavelavkalkeal.erdklsgknievavi 190
                 g rp+gv++l++g+de g p+L++++psG ++e+   +  Gs+s++a+t+le++   +   ++ee++  a++al+ +l ++++l+++n+++ v+
  EPX72192.1 124 GSRPYGVGFLVIGYDESG-PHLLEFQPSGLVLEY-LGTGLGSRSQSARTYLERNSstFATASREELILSALRALRDTLtKEQELTEDNVSISVV 215
                 ***************988.***************.6******************9999*****************99867999********986 PP

>> Proteasome_A_N  Proteasome subunit A N-terminal signature
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.0   0.0   3.2e-16   2.8e-12       1      23 []       6      28 ..       6      28 .. 0.99

  Alignments for each domain:
  == domain 1  score: 46.0 bits;  conditional E-value: 3.2e-16
  Proteasome_A_N  1 YDrslttFSPdGRLfQVEYAmkA 23
                    YD + tt+SP+GRL+QVEYA++A
      EPX72192.1  6 YDGDATTWSPQGRLHQVEYALEA 28
                    9*********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (271 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       514  (0.0286686); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1941.29
//
Query:       EPX72193.1  [L=420]
Description: cardiolipin-specific phospholipase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.1e-23   83.3   0.0    3.7e-22   79.2   0.0    2.2  1  Abhydrolase_1  alpha/beta hydrolase fold
    2.6e-15   56.4   0.0    1.7e-13   50.4   0.0    2.1  2  Hydrolase_4    Serine aminopeptidase, S33
    1.2e-11   45.6   0.0    1.9e-11   45.0   0.0    1.3  1  Abhydrolase_6  Alpha/beta hydrolase family
    8.5e-05   22.5   0.0      0.005   16.7   0.0    2.5  2  Abhydrolase_3  alpha/beta hydrolase fold
    0.00012   21.5   0.2     0.0017   17.7   0.2    2.2  1  DUF915         Alpha/beta hydrolase of unknown function (DUF9
    0.00016   21.4   0.0    0.00026   20.7   0.0    1.3  1  Esterase       Putative esterase
    0.00076   18.3   0.0      0.003   16.3   0.0    1.8  2  Ndr            Ndr family
    0.00082   19.3   0.0     0.0015   18.4   0.0    1.5  1  Lipase_3       Lipase (class 3)
     0.0016   18.0   0.0     0.0029   17.2   0.0    1.4  1  LIDHydrolase   Lipid-droplet associated hydrolase
      0.002   18.3   0.0        0.3   11.2   0.0    2.4  2  Thioesterase   Thioesterase domain
     0.0021   17.8   0.0     0.0042   16.8   0.0    1.4  1  PGAP1          PGAP1-like protein
     0.0036   17.3   0.1     0.0096   15.9   0.0    1.7  2  UPF0227        Uncharacterised protein family (UPF0227)
     0.0039   17.1   0.0     0.0067   16.3   0.0    1.3  1  Ser_hydrolase  Serine hydrolase
  ------ inclusion threshold ------
      0.036   13.9   0.0        0.3   10.9   0.0    2.1  2  Palm_thioest   Palmitoyl protein thioesterase
      0.043   13.6   0.0      0.085   12.6   0.0    1.5  1  Abhydrolase_5  Alpha/beta hydrolase family
       0.12   12.0   0.2        6.7    6.3   0.1    2.4  2  FSH1           Serine hydrolase (FSH1)
       0.16   11.4   0.0        2.9    7.3   0.0    2.2  2  Peptidase_S9   Prolyl oligopeptidase family
       0.16   11.9   0.0        1.8    8.4   0.0    2.1  2  BAAT_C         BAAT / Acyl-CoA thioester hydrolase C terminal


Domain annotation for each model (and alignments):
>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.2   0.0   3.7e-25   3.7e-22       2     257 .]      93     405 ..      92     405 .. 0.79

  Alignments for each domain:
  == domain 1  score: 79.2 bits;  conditional E-value: 3.7e-25
                    EEEEE-STTTCGGGGTTGHHHHHHHHT...TSEEEEEEETTSTTSSSTTTGB.........CHHSHHHHHHHHHHHHHHCTTSSEEEEEETHHHHH CS
  Abhydrolase_1   2 vlvilhGlpgssdvwaerglapaLakd...gfdvillDlrGvgySspapacin........ddygtasvaddldrildalgddkltlvGhSmGGmi 86 
                    ++v+lhG++++++ +++   ++ L k+    +  + +D++G g Ss++p +          +      + ++l+  ++++++++ tlvGhS+GG +
     EPX72193.1  93 SVVYLHGYGAGLGFFFQ--NIDELTKEttkTHNSYFIDWLGMGNSSRPPFKLKganaservH-EAESFFVNSLECWREKHKIESMTLVGHSLGGYL 185
                    79***************..*******************************999***999953.44445**************************** PP

                    HHHHHHHHGGGEEEEEEESE.....CSSCCHHH.HHHHHHHHHHHCHHCHHHHHHHHHHHHHHHHCCS..CHHHHHHHHHHHHHHHCHHHCCHHHH CS
  Abhydrolase_1  87 alayaaeyperVkalvllga.....idpaasli.eaqrqqaksfpdffdgyaadcarnpagplladel..aaleqrhrlvdalkfpdkskrfpssg 174
                    ++ ya +yp+rV +l+l+++     +++a + + e+ +  a+s   ++  + ++  ++++ ++ +de   +a++ + ++ ++l  p+++  +++++
     EPX72193.1 186 STVYAMRYPDRVEKLILVSPvgipeCPYATDDDaEEYPSVANSALHAMTDDTPKTNVTNEILQTQDETsgRASPGSIKPRNPL--PRWATFLWEQN 279
                    ********************776553333332213334445555666666666666666666666655223455555555555..66666666666 PP

                    HHHCHHHHHHH.HHHHHHHHHCCHHHHHHHHHC.......................................THHHHSEEEEEEETTCSSSCHHHH CS
  Abhydrolase_1 175 sdnasslatga.lksieqwpttdsaklllrlre.......................................lknvlaptlvisgtsDplvppkal 230
                     +++  l + + l+ + +  +t ++ ++l +++                                       l+ v++ t++++g++D+++++  l
     EPX72193.1 280 VTPFALLRYSGpLGPKLTSFWTSRRFSILPDNIarslhsycysifrlkgsseyalgsllapgafarksiqnrLHRVKCRTIFMYGDKDWMDDIAGL 375
                    666665554331334455566666666666666999999999999999999999999999999999999999************************ PP

                    HHHHHCHTS...EEEEEEETCSSSHHHHSH CS
  Abhydrolase_1 231 edlaqllpk...krlvvisdagHlaflegp 257
                       + ll++   ++++ i +agH  +l++p
     EPX72193.1 376 KAVETLLKQnveAEHHYIINAGHHCYLDNP 405
                    ******999999999999*****9999986 PP

>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.4   0.0   1.7e-16   1.7e-13       3     142 ..      90     245 ..      88     257 .. 0.80
   2 ?    3.9   0.0     0.028        27     181     233 ..     346     399 ..     339     405 .. 0.79

  Alignments for each domain:
  == domain 1  score: 50.4 bits;  conditional E-value: 1.7e-16
  Hydrolase_4   3 pkavvvlvHGlaehsgryaelaeaLaaqGfav...yalDhrGhGrse..gkrghvpsfddyvdDlaafv....ekvkeehpelplfllGhSmGGlial 91 
                  +k+ vv +HG++   g + + +++L+++  ++   y +D+ G G+s   + + + ++ ++ v  +++f+    e  +e+h+ + ++l+GhS+GG++++
   EPX72193.1  90 NKKSVVYLHGYGAGLGFFFQNIDELTKETTKThnsYFIDWLGMGNSSrpPFKLKGANASERVHEAESFFvnslECWREKHKIESMTLVGHSLGGYLST 187
                  6899*********************99876543339***********986666667888888888888655557778999999*************** PP

  Hydrolase_4  92 lyllrypdkvaglilsaPalkikakl......k.appllklllkllgkllpklqvsnn 142
                   y+ rypd+v++lil++P+  ++ ++      + +p++++ +l  +    pk  v+n+
   EPX72193.1 188 VYAMRYPDRVEKLILVSPVGIPECPYatdddaEeYPSVANSALHAMTDDTPKTNVTNE 245
                  ******************9777766667776644666666666666666666666554 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.028
  Hydrolase_4 181 krleeraakitlPllllhGeaDkvvdpeasrelyerlgsk.dktlklypglyHe 233
                  k++++r ++++  +++++G++D+  d ++ +++   l+++ + + +++ ++ H 
   EPX72193.1 346 KSIQNRLHRVKCRTIFMYGDKDWMDDIAGLKAVETLLKQNvEAEHHYIINAGHH 399
                  7899********************999998777766666656666666666665 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.0   0.0   1.9e-14   1.9e-11       1     217 [.      94     408 ..      94     409 .. 0.47

  Alignments for each domain:
  == domain 1  score: 45.0 bits;  conditional E-value: 1.9e-14
                    EEEE--GC.....GC..HHHHHHHHCCTCEEEEE--TTSTS-GGCS--HHHC...HHHHHHHCCTT........TTSE...EEEEETCHHHHHHHH CS
  Abhydrolase_6   1 vlllHGagssassWl..vapLaallaagvhvlapDlpGhGrsdpppldledl...adlaalldelaa......gggpv...vlvGHSlGGalalaa 82 
                    v+ lHG g++ + ++   ++L +  ++ +  + +D+ G+G s++pp+ l  +   ++++++   +++        +++    lvGHSlGG+l++  
     EPX72193.1  94 VVYLHGYGAGLGFFFqnIDELTKETTKTHNSYFIDWLGMGNSSRPPFKLKGAnasERVHEAESFFVNslecwrEKHKIesmTLVGHSLGGYLSTV- 188
                    6889*9777745553356677666666677788*************99988222233333333333366669966777778*********97777. PP

                    HHCC.......EE.EEES-...................................................----TTTS----TTHHHHHHTT-CCC CS
  Abhydrolase_6  83 apla.....lvvg.vlldp.................................................pptalpagllaaalelllallallrlla 123
                      +a     +v++ +l++p                                                                             
     EPX72193.1 189 --YAmrypdRVEKlILVSPvgipecpyatdddaeeypsvansalhamtddtpktnvtneilqtqdetsG--------------------------- 255
                    ..3333355444499999988766555555555554333333333333333222222222222222220........................... PP

                    CHCCH..........S-HSCCCCHHHCCCCHCHCCCGHH......................................................HHC CS
  Abhydrolase_6 124 wlsre..........plprlfladedadaawrarlarla......................................................all 155
                        +          plp ++         w +++++ a                                                      a  
     EPX72193.1 256 ----RaspgsikprnPLP-RWAT-----FLWEQNVTPFAllrysgplgpkltsfwtsrrfsilpdniarslhsycysifrlkgsseyalgsllAPG 341
                    ....12222222221222.3333.....44444444444444444334333332222223333333333333333333333333333222111111 PP

                    CHHCHTTCCHHTT-TTGCEEECTT-CHHH.....HCHHCCCHSTTEEET.CE...SSS-HHHHSHHHH CS
  Abhydrolase_6 156 aglgllpaaawadlpvpllvlggeDplvp.....rllerllaqagarlp.vvlpgaGHlphleepdev 217
                    a+       ++ ++ ++++ ++g+ +++        +e ll  + ++ + +++ +aGH+ +l++p+++
     EPX72193.1 342 AFARKSIQNRLHRVKCRTIFMYGDKDWMDdiaglKAVETLLK-QNVEAEhHYIINAGHHCYLDNPKDF 408
                    111111244555555555434555444441112222334444.4444448********6666699665 PP

>> Abhydrolase_3  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0     5e-06     0.005      64     120 ..     165     222 ..     137     268 .. 0.68
   2 ?    3.0   0.0     0.077        76     167     210 ..     357     401 ..     331     402 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 5e-06
                    HHHTETTCEEEEEEETHHHHHHHHHHHHHHHTT---EEEEEEESE........-SSTSSTTSHHH CS
  Abhydrolase_3  64 welgadpsrivlaGdSaGGnlaaavalrardegepkvagqvliyP........vtdlertesesi 120
                    w+ +++ ++++l+G S GG l+++ a+r  d+    v+ ++l++P        +t   + + e++
     EPX72193.1 165 WREKHKIESMTLVGHSLGGYLSTVYAMRYPDR----VEKLILVSPvgipecpyAT---DDDAEEY 222
                    778889999**********************8....99*******6554433322...2222333 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.077
                    --EEEEEETT-TTHH.HHHHHHHHHHHTT--EEEEEETTEETTGG CS
  Abhydrolase_3 167 pptlvvvaefDplrd.egeayaerlraagvevelieyegmvHgfa 210
                    ++t+ + +++D++ d  g +  e l +++ve+e++ + ++ H ++
     EPX72193.1 357 CRTIFMYGDKDWMDDiAGLKAVETLLKQNVEAEHHYIINAGHHCY 401
                    589999********95679999**************999999765 PP

>> DUF915  Alpha/beta hydrolase of unknown function (DUF915)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.2   1.7e-06    0.0017      63     126 ..     133     195 ..      82     200 .. 0.69

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 1.7e-06
      DUF915  63 kdaknPiikvgfednrdaslkkqakwlkkvlseLkkkYnikkfnavGhSmGglaltsYleeyad 126
                 +++ +P  k++ ++  +  +++ + ++ + l+  ++k +i+ + +vGhS Gg   t+Y++ y d
  EPX72193.1 133 GNSSRPPFKLKGANASE-RVHEAESFFVNSLECWREKHKIESMTLVGHSLGGYLSTVYAMRYPD 195
                 45566666666666664.78888888899999999*************************9976 PP

>> Esterase  Putative esterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   2.6e-07   0.00026     117     159 ..     174     215 ..     146     258 .. 0.79

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 2.6e-07
                 EEEEEETHHHHHHHHHHHCSTTTCCEEEEES--S-CCHCHHHC CS
    Esterase 117 ravaGqSmGGlgALilalkhpdrFgsvssfSpivnpsnamWgq 159
                 ++++G+S+GG+ + ++a+++pdr    +  Sp+    ++++ +
  EPX72193.1 174 MTLVGHSLGGYLSTVYAMRYPDRVEKLILVSPV-GIPECPYAT 215
                 89*****************************76.333455544 PP

>> Ndr  Ndr family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0     3e-06     0.003      94     133 ..     167     206 ..     158     214 .. 0.88
   2 ?   -1.3   0.0      0.72   7.2e+02     207     230 ..     344     367 ..     340     387 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 3e-06
                 HHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES-- CS
         Ndr  94 dhfklksviglGvgaGAyilarfalkhperveglvLinit 133
                 ++ k++s+  +G   G y+ + +a+++p+rve l+L+++ 
  EPX72193.1 167 EKHKIESMTLVGHSLGGYLSTVYAMRYPDRVEKLILVSPV 206
                 6778999999***************************986 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.72
                 T-------TTSSSS-EEEEEETTS CS
         Ndr 207 kRrdleierkklevkvllvvGdks 230
                  R+ ++  ++ ++++++ + Gdk 
  EPX72193.1 344 ARKSIQNRLHRVKCRTIFMYGDKD 367
                 5999999999***********985 PP

>> Lipase_3  Lipase (class 3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   1.5e-06    0.0015      38      90 ..     125     197 ..      97     236 .. 0.74

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 1.5e-06
                 HHHHHHH....................S-HHHHHHHHHHHHHHHTT-EEEEEEEETHHHHHHHHHHHHHHHTT CS
    Lipase_3  38 gfleaye....................eslreqvlkelkrllekypeysivvtGHSLGgalAlLaaldlveng 90 
                 +f++ ++                    + +++ + ++l+ + ek++  s++++GHSLGg l+++ a+ +  + 
  EPX72193.1 125 YFIDWLGmgnssrppfklkganaservHEAESFFVNSLECWREKHKIESMTLVGHSLGGYLSTVYAMRYPDRV 197
                 555555566666666666666666666677778888999999**********************999877666 PP

>> LIDHydrolase  Lipid-droplet associated hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   2.9e-06    0.0029      61     120 ..     147     206 ..      93     209 .. 0.82

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 2.9e-06
  LIDHydrolase  61 LedQiehkedflkellek.aksekdvklilvGHSvGaYialevlkrlsersikkvvlLfPt 120
                    ++ ++ +e+f+ + le  ++++k   + lvGHS G Y++   + r+++r ++k++l+ P+
    EPX72193.1 147 ASERVHEAESFFVNSLECwREKHKIESMTLVGHSLGGYLSTVYAMRYPDR-VEKLILVSPV 206
                   567788888999999988788888999**********************9.******9996 PP

>> Thioesterase  Thioesterase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0    0.0003       0.3      41      90 ..     147     196 ..     136     252 .. 0.81
   2 ?    4.7   0.0     0.028        28     169     215 ..     346     402 ..     309     413 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.0003
                   HHHCTTCHHHHHHHHHHHHHHH-SSSSEEEEEETHHHHHHHHHHHHHHHC CS
  Thioesterase  41 depplesieelaaeyaealrqiqpegPyalfGhSlGgllAfevArqLesq 90 
                    ++ ++++e+     +e+ r+ ++    +l+GhSlGg+l    A ++ ++
    EPX72193.1 147 ASERVHEAESFFVNSLECWREKHKIESMTLVGHSLGGYLSTVYAMRYPDR 196
                   5667888888888889999********************98888877665 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.028
                   E.........HHCEEEEEEGSS-CTCCCCCCCHCH.CHCTCESCEEEEEESSHCCHH CS
  Thioesterase 169 q.........klratlfngsddklkdldtlelaer.weqktsgevsvhvlegdhfyl 215
                   +         k+r+ +++g++d++ d+  l+  e+ ++q +  e++  +  g h yl
    EPX72193.1 346 KsiqnrlhrvKCRTIFMYGDKDWMDDIAGLKAVETlLKQNVEAEHHYIINAGHHCYL 402
                   133345667789****************99999996666666666666666666665 PP

>> PGAP1  PGAP1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   4.2e-06    0.0042      85     142 ..     166     221 ..     145     253 .. 0.73

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 4.2e-06
       PGAP1  85 ssekeptsviliGHSmGGivaraaltlknyikqsvntiltlasPhalp..plsfdkdilk 142
                  ++++++s+ l+GHS+GG ++   ++++   ++ v++++   sP+  p  p ++d d  +
  EPX72193.1 166 REKHKIESMTLVGHSLGGYLS---TVYAMRYPDRVEKLIL-VSPVGIPecPYATDDDAEE 221
                 567899***************...4455556899999885.5677666224455555555 PP

>> UPF0227  Uncharacterised protein family (UPF0227)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.2       4.9   4.9e+03       2       8 ..      94     100 ..      93     102 .. 0.84
   2 !   15.9   0.0   9.7e-06    0.0096      48     104 ..     161     220 ..     146     254 .. 0.68

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 4.9
     UPF0227   2 llYlHGF 8  
                 ++YlHG+
  EPX72193.1  94 VVYLHGY 100
                 79****8 PP

  == domain 2  score: 15.9 bits;  conditional E-value: 9.7e-06
     UPF0227  48 eleklvaelgddnillvGssLGGyyatrlgerfglrq...vllnPalkplenlagklgee 104
                  le   ++++ ++++lvG sLGGy++t  + r+  r    +l+ P   p+   a   ++e
  EPX72193.1 161 SLECWREKHKIESMTLVGHSLGGYLSTVYAMRYPDRVeklILVSPVGIPECPYATDDDAE 220
                 5555556777788*******************9766556788888777776666555554 PP

>> Ser_hydrolase  Serine hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   6.8e-06    0.0067      55      93 ..     172     209 ..     159     238 .. 0.79

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 6.8e-06
                    TTEEEEEETCHHHHHHHHHHHTTSSSEEEEEEET--SGG CS
  Ser_hydrolase  55 ekvvlvAHSlgclavlhaaelqlakkvagalLVapadve 93 
                    e ++lv HSlg  ++  +a ++ +++v++ +LV+p  + 
     EPX72193.1 172 ESMTLVGHSLGGYLSTVYA-MRYPDRVEKLILVSPVGIP 209
                    4569*************99.***************9875 PP

>> Palm_thioest  Palmitoyl protein thioesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.42   4.2e+02     138     168 ..      27      55 ..       8      69 .. 0.75
   2 ?   10.9   0.0    0.0003       0.3       2      99 ..      94     203 ..      93     248 .. 0.73

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.42
  Palm_thioest 138 ywrdpekleeYlkknkFLpdiNnerdhakne 168
                    wr  +  + Y kk++ L  +Nn    ++ne
    EPX72193.1  27 QWRTESS-SAYAKKCE-LEVLNNVDFIRENE 55 
                   4787776.8*******.******95444444 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.0003
  Palm_thioest   2 vviwhGldsaesn....mqklaeliekli.gtyvknveigesea...edrkasffgnlndqveavckk......lelangfhaiGfSQGglflRali 84 
                   vv +hG ++  +     +++l+++  k + + ++  + +g+s++   + + a   + + +  + ++++      +++ + + ++G+S Gg +   ++
    EPX72193.1  94 VVYLHGYGAGLGFffqnIDELTKETTKTHnSYFIDWLGMGNSSRppfKLKGANASERVHEAESFFVNSlecwreKHKIESMTLVGHSLGGYLSTVYA 190
                   899999944433373346666666666664477777778888777664455555555555544444445556565667999**************** PP

  Palm_thioest  85 ercddkknvrnlisl 99 
                    r++ +  v++li +
    EPX72193.1 191 MRYP-DR-VEKLILV 203
                   ***5.54.8999865 PP

>> Abhydrolase_5  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   8.6e-05     0.085      50      88 ..     165     204 ..     159     237 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 8.6e-05
  Abhydrolase_5  50 ikeapklekfvvgGhslGGvvasrfaaee.ekiegvvfla 88 
                     +e+ k+e + + GhslGG +++ +a +  +++e +++++
     EPX72193.1 165 WREKHKIESMTLVGHSLGGYLSTVYAMRYpDRVEKLILVS 204
                    677889********************98757999999865 PP

>> FSH1  Serine hydrolase (FSH1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.1    0.0068       6.7       3      42 ..      90     128 ..      88     182 .. 0.80
   2 ?    3.2   0.0     0.059        58     156     189 ..     351     383 ..     318     400 .. 0.55

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0068
        FSH1   3 kkkkiLcLhGytqsgeiFraktsalrkllkklnvelvyld 42 
                 +kk +  LhGy+    +F + + +l k+ +k + + +++d
  EPX72193.1  90 NKKSVVYLHGYGAGLGFFFQNIDELTKETTK-THNSYFID 128
                 68999*************************9.77777765 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.059
        FSH1 156 eedkiqtptLhvlGelDtvvdeerseaLaeafkn 189
                   ++++++t++++G++D + d +   + +e+  +
  EPX72193.1 351 RLHRVKCRTIFMYGDKDWMDDIA-GLKAVETLLK 383
                 45788***********9886633.3333333333 PP

>> Peptidase_S9  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.0    0.0029       2.9      64      98 ..     172     206 ..     158     243 .. 0.87
   2 ?    1.6   0.0      0.16   1.6e+02     142     189 ..     355     401 ..     340     409 .. 0.77

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0029
                   GGEEEEEETHHHHHHHHHHHH-GGG-SEEEEESE- CS
  Peptidase_S9  64 erlaitGgSyGGyltgaalnqrpdlFkaavaevpv 98 
                   e + + G+S GGyl+ + +++ pd+ + ++ + pv
    EPX72193.1 172 ESMTLVGHSLGGYLSTVYAMRYPDRVEKLILVSPV 206
                   678999*************9999987777777666 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.16
                   ---EEEEEEETT-SSS-THHHHHHHHHHH--S-SEEEEEETTS-SSTT CS
  Peptidase_S9 142 aypplLlihGlaDdrvppaealklvaaLqkkgknvlllifpdegHgvg 189
                   ++++++++ G++D    +  +lk v++L k++++++ ++  ++gH ++
    EPX72193.1 355 VKCRTIFMYGDKDWMDDI-AGLKAVETLLKQNVEAEHHYIINAGHHCY 401
                   778888888888865544.58999*********************876 PP

>> BAAT_C  BAAT / Acyl-CoA thioester hydrolase C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.0    0.0018       1.8      18      75 ..     168     225 ..     156     263 .. 0.65
   2 ?    0.9   0.1      0.36   3.6e+02     113     163 ..     354     400 ..     344     407 .. 0.69

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0018
                 TB--SSEEEEEETHHHHHHHHHHHHSS.SEEEEEEES--SB--SSEEEETTE..EE--- CS
      BAAT_C  18 kvkkdkigllGiSkGgelalllasflk.kisavvlingsavvvegklvykdeskvlpel 75 
                 k k + ++l+G+S Gg l  + a++++  ++ ++l+++  +    + + +d  ++ p +
  EPX72193.1 168 KHKIESMTLVGHSLGGYLSTVYAMRYPdRVEKLILVSPVGIPE-CPYATDDDAEEYPSV 225
                 445569*********************9999999998876554.333333333444444 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.36
                 G--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT--.--EEEEETTB-S-- CS
      BAAT_C 113 kakgpillvvgedDknwpSkesaekaserLkkagkkvevqlltYpkaGHli 163
                 + k+  +++ g  Dk w  +    ka+e L k++ +   ++++  +aGH+ 
  EPX72193.1 354 RVKCRTIFMYG--DKDWMDDIAGLKAVETLLKQNVE--AEHHYIINAGHHC 400
                 55566666655..55566777777788888887766..5555558****85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (420 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       559  (0.0311785); expected 358.6 (0.02)
Passed bias filter:                      517  (0.028836); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.56u 0.31s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 2905.54
//
Query:       EPX72194.1  [L=1072]
Description: cell end marker Tea3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.6e-20   72.0   0.1    1.1e-06   28.5   0.0    3.5  3  Kelch_5       Kelch motif
    6.9e-20   70.9   0.1    4.7e-06   26.8   0.0    4.2  3  Kelch_3       Galactose oxidase, central domain
    2.7e-18   65.7   0.2      1e-08   35.0   0.0    3.7  3  Kelch_4       Galactose oxidase, central domain
    4.9e-18   64.3   3.1      1e-06   28.5   0.1    3.8  3  Kelch_2       Kelch motif
    4.9e-15   55.2   0.5    6.2e-05   23.1   0.1    4.0  3  Kelch_6       Kelch motif
    6.4e-15   54.5   0.0    1.6e-05   24.3   0.0    3.5  3  Kelch_1       Kelch motif
  ------ inclusion threshold ------
        1.6    9.4   6.1        4.7    7.9   0.1    3.5  3  LprI          Lysozyme inhibitor LprI


Domain annotation for each model (and alignments):
>> Kelch_5  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   5.2e-06     0.013       4      41 ..     150     185 ..     149     186 .. 0.88
   2 !   24.0   0.0     1e-08   2.7e-05       2      41 ..     213     250 ..     212     251 .. 0.96
   3 !   28.5   0.0   4.1e-10   1.1e-06       1      39 [.     262     299 ..     262     301 .. 0.91

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 5.2e-06
     Kelch_5   4 pRaghcavtvsekiYvyGGkvgrdgsvsddvyvLdlps 41 
                 +R+g +  t ++ i+++GG+v  + ++s+d+++ +l++
  EPX72194.1 150 SRHGYSLDTQGTDIILFGGIV--NAEYSNDLLIMNLKG 185
                 6777777788999********..**********99975 PP

  == domain 2  score: 24.0 bits;  conditional E-value: 1e-08
     Kelch_5   2 PppRaghcavtvsekiYvyGGkvgrdgsvsddvyvLdlps 41 
                 Pp+R +h++v++++k++++GG++   +++ +d++ Ldl +
  EPX72194.1 213 PPGRCNHATVVLGNKLIIHGGRN--KMGLLGDLWLLDLDT 250
                 99*********************..9***********987 PP

  == domain 3  score: 28.5 bits;  conditional E-value: 4.1e-10
     Kelch_5   1 iPppRaghcavtvsekiYvyGGkvgrdgsvsddvyvLdl 39 
                 +P+pR +h +v +++k+Y+yGG++  ++ +s++++ +dl
  EPX72194.1 262 FPCPRESHKFVSLGNKVYMYGGFDK-NQVLSNELWCFDL 299
                 6***********************4.88889****8887 PP

>> Kelch_3  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.0   4.3e-05      0.11       4      48 ..     163     223 ..     161     224 .. 0.79
   2 !   26.2   0.0   2.7e-09     7e-06       1      45 [.     225     270 ..     225     274 .. 0.90
   3 !   26.8   0.0   1.8e-09   4.7e-06       1      41 [.     275     316 ..     275     321 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 4.3e-05
     Kelch_3   4 lyifGGlgddgqdrlndvyvydl............dtn...tWaei...aslppaRaghaata 48 
                 + +fGG    + +++nd++  +l            d+n    W e+   +s+pp+R++ha+++
  EPX72194.1 163 IILFGGIV--NAEYSNDLLIMNLkglsvspddsskDSNnarRWSELplqSSSPPGRCNHATVV 223
                 789*****..*********5555445546677655333799999999*************986 PP

  == domain 2  score: 26.2 bits;  conditional E-value: 2.7e-09
     Kelch_3   1 gdrlyifGGlgddgqdrlndvyvydldtntWaei...aslppaRagha 45 
                 g++l i+GG++      l+d++++dldt  W+ei   +s p +R +h 
  EPX72194.1 225 GNKLIIHGGRN--KMGLLGDLWLLDLDTMIWTEIrpvGSFPCPRESHK 270
                 89*********..*********************77777777*99997 PP

  == domain 3  score: 26.8 bits;  conditional E-value: 1.8e-09
     Kelch_3   1 gdrlyifGGlgddgqdrlndvyvydldtntWaei..aslppaR 41 
                 g+++y +GG++  +q  +n+++ +dld+ +W ++  +s p   
  EPX72194.1 275 GNKVYMYGGFD-KNQVLSNELWCFDLDKQSWFRTkgPSIPESS 316
                 89*********.899999**************99988878755 PP

>> Kelch_4  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.0   0.0    0.0093        24      11      37 ..     159     184 ..     152     214 .. 0.83
   2 !   35.0   0.0     4e-12     1e-08       1      45 [.     215     260 ..     215     264 .. 0.87
   3 !   21.3   0.0   7.8e-08    0.0002       1      48 [.     265     313 ..     265     314 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.0093
     Kelch_4  11 pdgtiylfGGrgedgtllndlylldls 37 
                 ++ +i+lfGG+ +  + +ndl + +l+
  EPX72194.1 159 QGTDIILFGGIVNA-EYSNDLLIMNLK 184
                 5679*********7.899999776665 PP

  == domain 2  score: 35.0 bits;  conditional E-value: 4e-12
     Kelch_4   1 pRaghsatsipdgtiylfGGrgedgtllndlylldlstntWrrl...g 45 
                 +R++h++++++ ++++++GGr+  ++ll+dl+lldl t  W+++   g
  EPX72194.1 215 GRCNHATVVLG-NKLIIHGGRNK-MGLLGDLWLLDLDTMIWTEIrpvG 260
                 59********6.9**********.67***************8884334 PP

  == domain 3  score: 21.3 bits;  conditional E-value: 7.8e-08
     Kelch_4   1 pRaghsatsipdgtiylfGGrgedgtllndlylldlstntW..rrlgslP 48 
                 pR +h ++s++ +++y++GG   +  l+n+l+ +dl   +W  ++ +s P
  EPX72194.1 265 PRESHKFVSLG-NKVYMYGGFDKNQVLSNELWCFDLDKQSWfrTKGPSIP 313
                 56678889996.9****************************877777777 PP

>> Kelch_2  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.0   0.00016      0.41       2      38 ..     151     184 ..     150     187 .. 0.93
   2 !   23.7   0.1   1.2e-08   3.1e-05       1      47 [.     215     258 ..     215     260 .. 0.93
   3 !   28.5   0.1     4e-10     1e-06       4      47 ..     268     309 ..     265     311 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00016
     Kelch_2   2 rgghsssvpggkiyvvGGahtdnpnlsssdvhvldle 38 
                 r+g s  + g  i+++GG+    + ++s+d+ +++l+
  EPX72194.1 151 RHGYSLDTQGTDIILFGGI---VNAEYSNDLLIMNLK 184
                 789999999**********...************987 PP

  == domain 2  score: 23.7 bits;  conditional E-value: 1.2e-08
     Kelch_2   1 rrgghsssvpggkiyvvGGahtdnpnlsssdvhvldlekhvWeevtp 47 
                 +r+ h+++v+g+k+++ GG+   n+     d++ ldl++  W+e  p
  EPX72194.1 215 GRCNHATVVLGNKLIIHGGR---NKMGLLGDLWLLDLDTMIWTEIRP 258
                 599*****************...*******************99755 PP

  == domain 3  score: 28.5 bits;  conditional E-value: 4e-10
     Kelch_2   4 ghsssvpggkiyvvGGahtdnpnlsssdvhvldlekhvWeevtp 47 
                  h ++++g+k+y++GG+  d +   s+ ++++dl+k++W +++ 
  EPX72194.1 268 SHKFVSLGNKVYMYGGF--DKNQVLSNELWCFDLDKQSWFRTKG 309
                 6899*************..9999999**************9886 PP

>> Kelch_6  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.0   0.00029      0.75       2      39 ..     151     187 ..     150     195 .. 0.89
   2 !   18.2   0.0   8.7e-07    0.0022       2      50 .]     216     266 ..     216     266 .. 0.87
   3 !   23.1   0.1   2.4e-08   6.2e-05       2      42 ..     266     306 ..     264     315 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00029
     Kelch_6   2 raghslvsvggkiYifGGytdsspylnkvwvydpetks 39 
                 r+g+sl + g  i +fGG ++  +y+n++++ +++  s
  EPX72194.1 151 RHGYSLDTQGTDIILFGGIVN-AEYSNDLLIMNLKGLS 187
                 89*******************.8******998887665 PP

  == domain 2  score: 18.2 bits;  conditional E-value: 8.7e-07
     Kelch_6   2 raghslvsvggkiYifGGytdsspylnkvwvydpetksWeq...lpplpvpr 50 
                 r+ h++v+ g+k+ i GG++     l ++w++d++t+ W++   ++++p pr
  EPX72194.1 216 RCNHATVVLGNKLIIHGGRNKM-GLLGDLWLLDLDTMIWTEirpVGSFPCPR 266
                 89*******************6.899***************33335677776 PP

  == domain 3  score: 23.1 bits;  conditional E-value: 2.4e-08
     Kelch_6   2 raghslvsvggkiYifGGytdsspylnkvwvydpetksWeq 42 
                 r +h +vs g+k+Y++GG +     +n +w++d++  sW +
  EPX72194.1 266 RESHKFVSLGNKVYMYGGFDKNQVLSNELWCFDLDKQSWFR 306
                 6689***************8888999*************76 PP

>> Kelch_1  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.0   0.0     0.007        18       1      35 [.     150     184 ..     150     207 .. 0.86
   2 !   21.2   0.0   6.2e-08   0.00016       2      44 ..     216     258 ..     215     260 .. 0.95
   3 !   24.3   0.0   6.4e-09   1.6e-05       2      39 ..     266     304 ..     265     307 .. 0.94

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.007
                 BBBSEEEEEETTEEEEEEEBCSSSBEEEEEEEETT CS
     Kelch_1   1 aragagavvvggkiYviGGsdggnalssvevyDpe 35 
                 +r+g++  + g+ i  +GG  + ++++++ +++++
  EPX72194.1 150 SRHGYSLDTQGTDIILFGGIVNAEYSNDLLIMNLK 184
                 5889999999******************9999987 PP

  == domain 2  score: 21.2 bits;  conditional E-value: 6.2e-08
                 BBSEEEEEETTEEEEEEEBCSSSBEEEEEEEETTTTEEEEECC CS
     Kelch_1   2 ragagavvvggkiYviGGsdggnalssvevyDpetntWrelps 44 
                 r++++ vv+g+k+ + GG++    l +++ +D+ t  W+e+ +
  EPX72194.1 216 RCNHATVVLGNKLIIHGGRNKMGLLGDLWLLDLDTMIWTEIRP 258
                 9*************************************99876 PP

  == domain 3  score: 24.3 bits;  conditional E-value: 6.4e-09
                 BBSEEEEEETTEEEEEEEBCS.SSBEEEEEEEETTTTEE CS
     Kelch_1   2 ragagavvvggkiYviGGsdg.gnalssvevyDpetntW 39 
                 r  + +v++g+k+Y  GG+d  +  ++ ++++D+ +++W
  EPX72194.1 266 RESHKFVSLGNKVYMYGGFDKnQVLSNELWCFDLDKQSW 304
                 67899********************************** PP

>> LprI  Lysozyme inhibitor LprI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.1    0.0018       4.7       5      36 ..     642     674 ..     638     692 .. 0.77
   2 ?    1.2   1.1      0.22   5.7e+02      33      64 ..     830     861 ..     778     876 .. 0.74
   3 ?   -0.6   0.1      0.84   2.2e+03      26      70 ..     878     912 ..     871     929 .. 0.68

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0018
                 TT-HHH..HHHHHHHHHHHHHHHHHHHHHHH...H CS
        LprI   5 aseaetqanqCasaalkaadaeLnkaykalk...e 36 
                 + ++e+   qC+++ +k+++ eLn+ y++l    e
  EPX72194.1 642 ERKVEE--LQCMNSIIKSQQVELNRNYEKLHsvfE 674
                 555555..9********************995442 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.22
                 HHHHHHHH....TT....HHHHHHHHHHHHHHHHHH CS
        LprI  33 alkeekek....kavssearkaLkdaqraWikyRda 64 
                 +l+    +    k++ +  +++L+d q+ ++k+R +
  EPX72194.1 830 KLQ----DspttKQKITHLESQLVDMQQSFEKQRIN 861
                 222....1233466778889999*********9965 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.84
                 HHHHHH.HHHHHHHHHTT....HHHHHHHHHHHHHHHHHHHHHHHT CS
        LprI  26 eLnkay.kalkeekekkavssearkaLkdaqraWikyRdaeCalak 70 
                 eL++ay +al+ ek +          L ++   + + R+a+  + +
  EPX72194.1 878 ELKHAYsSALA-EKGQ----------LLNQMGSFTDARKADVLESQ 912
                 89999966666.4444..........78888888888888873333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1072 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1520  (0.0847788); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.87u 0.29s 00:00:01.15 Elapsed: 00:00:00.47
# Mc/sec: 6922.84
//
Query:       EPX72195.1  [L=776]
Description: transcription factor Thi1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-25   90.0   4.0    1.2e-25   90.0   4.0    1.9  2  Fungal_trans  Fungal specific transcription factor domain
    1.1e-10   41.4  11.6    2.7e-10   40.2  11.6    1.7  1  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.0   4.0   1.4e-29   1.2e-25       2     266 ..     259     498 ..     258     499 .. 0.84
   2 ?   -2.1   0.1      0.17   1.5e+03     231     264 ..     612     646 ..     561     649 .. 0.72

  Alignments for each domain:
  == domain 1  score: 90.0 bits;  conditional E-value: 1.4e-29
  Fungal_trans   2 drffsnfhpqfpilhk.......psflpktssenssksayaspllllailalGalfsesetkesnssltsesqefiafplraeilihedfsspsssl 91 
                   ++ff+n++  + ++h        + fl+ +     ++++  + + ll++la G +++ +++    + ++++    +  + +a +++  +++    ++
    EPX72195.1 259 NTFFTNIQTNLFFYHAsffkirlEIFLSIK-----NQTDPGFLCILLLVLAFGNQYMIEHQTDPVAASSQVCVIGNRLFSAAVSIF--PMVLLQANT 348
                   578888886664555544433444444444.....555555555559999999999988887765555544333333344777777..99999999* PP

  Fungal_trans  92 wilqsLlllelyektssdralherhhgvavrlarslgLhrnpsyvgkkslwklweeeaesrrRlwwaaFylDktialklGrppllddsqinlpLPcd 188
                   +++qs  l++ly++ + ++++ + ++g+av+ a slgLh+n ++        l+   +e r Rlww++F+lD++i++ +Grp+ +  ++i++p+P  
    EPX72195.1 349 NTIQSAILIALYLQPTIYQKASYSYFGLAVKTAISLGLHKNCEDFT------LSQSSRELRNRLWWSVFCLDRFISIATGRPFSIALDNITTPYPSI 439
                   ********************************************99......*******************************99************ PP

  Fungal_trans 189 dddlwesddaseetlvetklsneeksrkiasfllaLkkilskiagsllsiekqlqqrdlqseklswveeleraldnWr 266
                     dl++    s +t++               +++ L +i+s++ ++l+   +   +++l+      v++l+ +l+ W+
    EPX72195.1 440 LFDLEIPGIPSMVTNMC--------------AVIELTRITSEVCDCLYWKASSDFNTQLS-----HVRRLYARLELWK 498
                   ****************9..............9********************99999999.....************8 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.17
  Fungal_trans 231 iagsllsiekqlqqrdlq.seklswveeleraldn 264
                    +++l  +  +l+qr++  +++l+ ++el+++l+n
    EPX72195.1 612 AVSKLWEVLEFLSQRNEItRLNLQTLKELSEQLTN 646
                   34446667777777777788888899999999876 PP

>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.2  11.6     3e-14   2.7e-10       1      38 [.      37      72 ..      37      74 .. 0.94

  Alignments for each domain:
  == domain 1  score: 40.2 bits;  conditional E-value: 3e-14
                SS-HHHHHCT---STSSSS-HHHHHCTHHHCCCCTCCC CS
     Zn_clus  1 haCdnCrkkKvKCdakkPaCsnCkklnleCtfysessk 38
                +aC++Cr kK+KCd++ P C nC+ l+++C+ y+++ +
  EPX72195.1 37 RACKHCREKKIKCDGNDP-CENCRLLGVDCV-YTQKNQ 72
                69****************.************.999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (776 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       696  (0.0388198); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.30s 00:00:00.94 Elapsed: 00:00:00.47
# Mc/sec: 5004.97
//
Query:       EPX72196.1  [L=387]
Description: ribosome biogenesis protein Nob1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.4e-30  104.5   1.9    5.1e-30  103.4   1.9    1.6  1  NOB1_Zn_bind     Nin one binding (NOB1) Zn-ribbon like
      2e-29  101.9   0.0    4.5e-29  100.8   0.0    1.6  1  PIN_6            PIN domain of ribonuclease
  ------ inclusion threshold ------
      0.013   16.3   9.8      0.013   16.3   9.8    2.4  2  WRNPLPNID        Putative WW-binding domain and destruction b
      0.042   13.9   0.4      0.076   13.0   0.4    1.4  1  DZR              Double zinc ribbon
       0.16   12.1   1.2       0.29   11.2   1.2    1.4  1  DUF4337          Domain of unknown function (DUF4337)
        9.1    6.0  12.7         14    5.4  12.7    1.2  1  RR_TM4-6         Ryanodine Receptor TM 4-6


Domain annotation for each model (and alignments):
>> NOB1_Zn_bind  Nin one binding (NOB1) Zn-ribbon like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.4   1.9   1.7e-33   5.1e-30       1      72 []     245     316 ..     245     316 .. 0.99

  Alignments for each domain:
  == domain 1  score: 103.4 bits;  conditional E-value: 1.7e-33
  NOB1_Zn_bind   1 ikrvkswvlrChaCfkvtkdmtkkFCpkCGnktLkrvavsvdengelklhlkknfqlnlrGtkyslpkpkgg 72 
                   i++vk++vlrCh+Cf +++dm+k FCp+CG +tL ++++s++++ge+++hlkknf++++rGtky +pkp +g
    EPX72196.1 245 IQNVKRFVLRCHGCFAIVNDMSKTFCPSCGGDTLIKTTCSINSKGEFQVHLKKNFEWKTRGTKYAIPKPVHG 316
                   899******************************************************************987 PP

>> PIN_6  PIN domain of ribonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.8   0.0   1.5e-32   4.5e-29       1      89 []       8      95 ..       8      95 .. 0.98

  Alignments for each domain:
  == domain 1  score: 100.8 bits;  conditional E-value: 1.5e-32
       PIN_6  1 lVlDagaliknslsslqnlaeklyttpeVvaEirdkkarerlellplelevrePspesvkkvtefakktGDlsvLSktDievlALtyeL 89
                lVlD+g +i +  s l+n+aek+yttp+V++Eird+ +r+++el+  ++  r P++e +k+v++fak+tGD+++LS tDi++lALtyeL
  EPX72196.1  8 LVLDTGGIICS-SSLLRNSAEKFYTTPRVIQEIRDDVSRRNFELWGGQVIQRVPKQEFIKRVSDFAKQTGDFASLSITDIHILALTYEL 95
                8********87.899************************************************************************98 PP

>> WRNPLPNID  Putative WW-binding domain and destruction box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   6.1       1.8   5.5e+03      34      56 ..     127     147 ..     116     153 .. 0.41
   2 ?   16.3   9.8   4.5e-06     0.013      28      70 .]     158     194 ..     149     194 .. 0.46

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 1.8
   WRNPLPNID  34 segesvdedeeaeeeeeeeeeee 56 
                   g +++++  +e+++e+e+++e
  EPX72196.1 127 ARG-KENSSP-SEDKKENEKKDE 147
                 222.222222.233333333332 PP

  == domain 2  score: 16.3 bits;  conditional E-value: 4.5e-06
   WRNPLPNID  28 seaeessegesvdedeeaeeeeeeeeeeedeedsgfngWitPs 70 
                 ++ae+++     ++++e+++ +eeeee+  ee+++  gWitPs
  EPX72196.1 158 KKAENEN---GASKSDEKQKLTEEEEEDR-EEEDD--GWITPS 194
                 2222222...2233434444455555554.44445..9****8 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.4   2.6e-05     0.076      27      49 .]     250     274 ..     216     274 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2.6e-05
         DZR  27 a.edrCpsCgek.vdpearfCpeCG 49 
                 +   rC  C +  +d+ ++fCp+CG
  EPX72196.1 250 RfVLRCHGCFAIvNDMSKTFCPSCG 274
                 35679******9999*********9 PP

>> DUF4337  Domain of unknown function (DUF4337)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   1.2   9.7e-05      0.29      57     132 ..     151     239 ..     126     260 .. 0.69

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 9.7e-05
     DUF4337  57 leqlelllkak.aeelaaavdkkiakykkkiarykke..........kkeikkkAkeleaerdeaneasdk..fdlasalLqiaIvlaa 132
                 +  +el++ka+ ++++++  +k++ + +++ +r +++          kk+ ++ A e   +  ++++a  +  f++  ++Lqi++ l +
  EPX72196.1 151 ELVMELQKKAEnENGASKSDEKQKLTEEEEEDREEEDdgwitpsnirKKKAQDSAGESVVQPSHLKVACATtdFAMQNVMLQIGLNLVS 239
                 3345666666544444444444444444444444444888888777777777777777777777776655577************9987 PP

>> RR_TM4-6  Ryanodine Receptor TM 4-6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4  12.7    0.0047        14      84     163 ..     135     209 ..     109     224 .. 0.69

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0047
                 XXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXX..........XXXXXXXXXXXXXXXXXXXXXXXXX- CS
    RR_TM4-6  84 pelkkklaeeeeaeeekeeeeepeaeaeekadaengekeekekekeeeekeseeeeeekkkkkkakskkkeeaeaeesel 163
                 p++     +++e+e+++e+++e   e ++ka++eng  ++ ek+k +ee+e+  eee   +  +++ +kk+++++++ ++
  EPX72196.1 135 PSE-----DKKENEKKDEQNTELVMELQKKAENENGASKSDEKQKLTEEEEEDREEEDDGWITPSNIRKKKAQDSAGESV 209
                 222.....445667778888888888889999999988888888777777777777777777777777777777666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (387 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2042  (0.113894); expected 358.6 (0.02)
Passed bias filter:                      898  (0.0500865); expected 358.6 (0.02)
Passed Vit filter:                       167  (0.00931452); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.69u 0.31s 00:00:01.00 Elapsed: 00:00:00.47
# Mc/sec: 2476.66
//
Query:       EPX72197.1  [L=434]
Description: ubiquitin-protein ligase E3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      5e-16   58.7  16.9    4.1e-13   49.4   4.7    3.6  3  IBR          IBR domain, a half RING-finger domain
    1.8e-13   50.8   0.0    5.9e-13   49.1   0.0    1.9  2  RWD          RWD domain
    0.00067   19.6  14.2    0.00067   19.6  14.2    4.4  4  zf-RING_5    zinc-RING finger domain
     0.0055   17.0  11.4     0.0055   17.0  11.4    4.4  4  zf-RING_2    Ring finger domain
  ------ inclusion threshold ------
        0.1   12.4   0.1       0.25   11.2   0.1    1.5  1  DUF294       Putative nucleotidyltransferase DUF294
       0.14   11.3   0.0        0.2   10.8   0.0    1.2  1  RE_Alw26IDE  Type II restriction endonuclease (RE_Alw26IDE)


Domain annotation for each model (and alignments):
>> IBR  IBR domain, a half RING-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.6  10.2         6   1.8e+04      42      55 ..     189     202 ..     153     210 .. 0.74
   2 !   49.4   4.7   1.4e-16   4.1e-13       1      62 []     245     307 ..     245     307 .. 0.96
   3 !   23.1   4.3   2.2e-08   6.5e-05      18      54 ..     364     397 ..     336     402 .. 0.76

  Alignments for each domain:
  == domain 1  score: -5.6 bits;  conditional E-value: 6
         IBR  42 skCgfefCfnCkke 55 
                 ++Cg+  C +C+ +
  EPX72197.1 189 ARCGHVCCKQCLTD 202
                 45778888888755 PP

  == domain 2  score: 49.4 bits;  conditional E-value: 1.4e-16
         IBR   1 ekyeklklkkslesdpnlkwCprpdCeaiieksegcksvtCskCgfefCfnCkkewHegl.sC 62 
                 +++++l +k+ +e+d n++ Cpr+ C+++++ + g+k + C kC f+fC+ C+++wH++l +C
  EPX72197.1 245 KRFQELDEKRRYENDTNIVFCPRKSCQGPARRDPGQKLAICLKCDFAFCSFCQASWHGDLsAC 307
                 689*********************************99********************99777 PP

  == domain 3  score: 23.1 bits;  conditional E-value: 2.2e-08
         IBR  18 lkwCprpdCeaiieksegcksvtCskCgfefCfnCkk 54 
                  + Cp   C++++e  +gc ++ C  Cg+ fCf C++
  EPX72197.1 364 GQRCP--TCDRVVERIDGCCHMICL-CGTHFCFLCGA 397
                 678**..9*****************.*********85 PP

>> RWD  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.1   0.0     2e-16   5.9e-13       2     114 ..      13     129 ..      12     131 .. 0.77
   2 ?   -2.9   0.0       2.7   8.1e+03      11      34 ..     236     264 ..     226     290 .. 0.49

  Alignments for each domain:
  == domain 1  score: 49.1 bits;  conditional E-value: 2e-16
                 HHHHHHHHHHHHSTTTCCCCH.......T--EE--S-EEEEEEECECCCC............TT-CEEEEEEEEE-SSTT.SS--EEEEEECCSS-HHH CS
                 xxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxx........xxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxx RF
         RWD   2 eqeqEleaLesIypdefevie.......nenysikleikikldededeedse........feekkkpslkleiklpeeYP.eeaPiislsstenlpkeq 84 
                 + ++El aL+sIyp+   + +            +++e ++ l+ +      +        ++ k+ p ++le+ l + YP +++P++ ++s++ lp ++
  EPX72197.1  13 LISDELVALQSIYPELELDGNncgrvsiP----VSTEDTFYLSFP------DlktnkldtIAVKHFPAIELEFFLRQGYPqKSPPVFFVKSSW-LPIQK 100
                 679************99666634433221....122222222222......1444444669*******************99999********.***** PP

                 HHHHHHHHHHHHHHTTTS--CHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RWD  85 vksleekleelaeenlgepvifalidwlke 114
                 v  l++++  l++e   ++v+f++i++++ 
  EPX72197.1 101 VRALTSHMLALWNEI-HDCVLFDAIELVRS 129
                 *************86.9*********9986 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2.7
                 HHHSTTTC.....CCCHT--EE--S-EEE CS
                 xxxxxxxx.....xxxxxxxxxxxxxxxx RF
         RWD  11 esIypdef.....evienenysikleiki 34 
                 e I + ++     e  e+++y+  ++i +
  EPX72197.1 236 EMIVGSDLrkrfqELDEKRRYENDTNIVF 264
                 34444444333222222455554444544 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6  14.2   2.2e-07   0.00067       2      33 ..     173     204 ..     172     224 .. 0.89
   2 ?   -2.1   3.2       1.3   3.9e+03      15      28 ..     283     296 ..     264     300 .. 0.67
   3 ?    1.1   0.1      0.13   3.8e+02      36      43 ..     364     371 ..     357     372 .. 0.83
   4 ?   -9.8  11.5         6   1.8e+04      20      25 ..     380     385 ..     376     400 .. 0.84

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 2.2e-07
   zf-RING_5   2 CnkCfeklskeekfyltsCgHifCekClkkll 33 
                 C +Cf+++s+++ f l +CgH++C++Cl+ + 
  EPX72197.1 173 CLICFDQFSGKDCFQLARCGHVCCKQCLTDYY 204
                 ****************************9877 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.3
   zf-RING_5  15 fyltsCgHifCekC 28 
                 ++ ++C   fC+ C
  EPX72197.1 283 AICLKCDFAFCSFC 296
                 67788888888888 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.13
   zf-RING_5  36 eavCpiCr 43 
                  ++Cp+C+
  EPX72197.1 364 GQRCPTCD 371
                 579****7 PP

  == domain 4  score: -9.8 bits;  conditional E-value: 6
   zf-RING_5  20 CgHifC 25 
                 C+H++C
  EPX72197.1 380 CCHMIC 385
                 999999 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0  11.4   1.8e-06    0.0055       2      33 ..     172     203 ..     171     220 .. 0.88
   2 ?    1.6   3.1      0.12   3.6e+02      14      40 ..     280     307 ..     269     309 .. 0.72
   3 ?    2.9   0.5     0.047   1.4e+02      31      43 ..     357     370 ..     356     371 .. 0.77
   4 ?   -4.3  15.9         6   1.8e+04       2      31 ..     366     397 ..     365     416 .. 0.66

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 1.8e-06
   zf-RING_2   2 eCpICleelssadsvlllpCgHvfhreClerw 33 
                 +C IC++++s +d+ +l  CgHv++++Cl+++
  EPX72197.1 172 TCLICFDQFSGKDCFQLARCGHVCCKQCLTDY 203
                 7********9999998889**********986 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.12
   zf-RING_2  14 dsvlll.pCgHvfhreClerwlrssstC 40 
                 +++ ++ +C   f+  C + w    s C
  EPX72197.1 280 QKLAIClKCDFAFCSFCQASWHGDLSAC 307
                 55554448*988*****99997666666 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.047
   zf-RING_2  31 erw.lrssstCPlC 43 
                 erw l + ++CP+C
  EPX72197.1 357 ERWaLLNGQRCPTC 370
                 5786777778**** PP

  == domain 4  score: -4.3 bits;  conditional E-value: 6
   zf-RING_2   2 eCpICleelssadsvl...llpCgHvfhreCle 31 
                  Cp C   +++ d ++   +l Cg +f++ C +
  EPX72197.1 366 RCPTCDRVVERIDGCChmiCL-CGTHFCFLCGA 397
                 699995444444444433155.**99*****64 PP

>> DUF294  Putative nucleotidyltransferase DUF294
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   8.2e-05      0.25      17     108 ..     105     198 ..      98     202 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 8.2e-05
      DUF294  17 aealarlvselndallrrlielaeeelgk..ppvpfallvmGSeGReEqtlktDqDnalvledeeeeaareyfaelaervneaLaalGyplCpg 108
                 ++++ +l++e++d +l  +iel+  ++ +  +  +  ++  GSe  +E +l+tD    l   ++ + +    f++++ + + +La++G   C++
  EPX72197.1 105 TSHMLALWNEIHDCVLFDAIELVRSDASSafHSPKEMVFPPGSESLKEEVLATDKHATLAEFENRKFTCLICFDQFSGKDCFQLARCGHVCCKQ 198
                 567788999*****************999553444455678****************9997777999999*******************99986 PP

>> RE_Alw26IDE  Type II restriction endonuclease (RE_Alw26IDE)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   6.8e-05       0.2     280     322 ..     318     360 ..     305     428 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 6.8e-05
  RE_Alw26IDE 280 lsDvqkLladekkgeeviswyskkiWdllkdkvkndedAlkls 322
                  ++ +++L +d++k+ee+   y k i d+l ++v+nde+A + +
   EPX72197.1 318 KMYLEHLETDKDKAEELEKRYGKRILDKLVEQVRNDEEAERWA 360
                  4456899********************************9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (434 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       788  (0.0439511); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.56u 0.24s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 2947.96
//
Query:       EPX72198.1  [L=213]
Description: mediator complex subunit Pmc5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.3e-46  155.7   1.1    6.8e-46  155.4   1.1    1.1  1  Med6      MED6 mediator sub complex component
  ------ inclusion threshold ------
       0.11   11.8   0.0       0.18   11.2   0.0    1.4  1  Chalcone  Chalcone-flavanone isomerase


Domain annotation for each model (and alignments):
>> Med6  MED6 mediator sub complex component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  155.4   1.1   7.6e-50   6.8e-46       1     133 []      12     148 ..      12     148 .. 0.97

  Alignments for each domain:
  == domain 1  score: 155.4 bits;  conditional E-value: 7.6e-50
        Med6   1 iqwkspewlqal.gLtennvldYFaespFydktsnNevlkmqrqfnqaaeeal...LkkmkGleyvlahvqepdlfvirkqerksatevtvlaaYyiig 95 
                 iqw+ pew+q++ gL+++nvldYF+ spFyd++snN++lkmq+qfn+    +l   L++++G+++v++++++p l++i+kq+r +++ev++l++Y++++
  EPX72198.1  12 IQWRMPEWVQSVgGLRTENVLDYFSFSPFYDHKSNNQMLKMQSQFNALDLGDLnnhLRRLTGTQFVVTQERPPFLWIIQKQHRLNEQEVRPLNTYFVCN 110
                 79**********99*********************************987665667******************************************* PP

        Med6  96 gniYqapslysvvqsrllsalsslskalkelsslakfs 133
                 +niY+ap+ y+++++r+l+a++sl++alk+++++++++
  EPX72198.1 111 ENIYMAPNAYTLLATRMLNATHSLQTALKKIENMPQYH 148
                 ***********************************996 PP

>> Chalcone  Chalcone-flavanone isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0     2e-05      0.18      78     135 ..     136     194 ..     114     204 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 2e-05
                 SSS-EEEEEEESS-EEHHHHHHHHTTTHHHHHHHTT---HHHHHHHHHH.HHHHTT-EE CS
    Chalcone  78 gpfeklirvtmikpLtGaeysekvaencvailksvgiytdaeakaiekf.levfkdetf 135
                 ++  k+ +  + +p +G  y +k+++n+ +++k+     ++e +a+++   + f  e+f
  EPX72198.1 136 TALKKIENMPQYHPQEGYTYPQKISDNSSSHIKDPQESDNKETAAVDDNaDNTFSTEDF 194
                 5677888899999*********************************8751466777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       568  (0.0316805); expected 358.6 (0.02)
Passed bias filter:                      326  (0.0181828); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 1501.22
//
Query:       EPX72199.1  [L=189]
Description: uracil phosphoribosyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.7e-56  189.0   0.0    3.9e-49  166.9   0.0    2.0  2  UPRTase       Uracil phosphoribosyltransferase
    3.5e-05   23.4   0.0    6.3e-05   22.6   0.0    1.4  1  Pribosyltran  Phosphoribosyl transferase domain


Domain annotation for each model (and alignments):
>> UPRTase  Uracil phosphoribosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.0   7.6e-09   6.8e-05       1      49 [.       6      53 ..       6      55 .. 0.93
   2 !  166.9   0.0   4.3e-53   3.9e-49      67     207 .]      51     187 ..      46     187 .. 0.95

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 7.6e-09
     UPRTase  1 vsshpllkakltilRdastsrkdfrelvdriarllaeealsallpveev 49
                +s+hp+++ ++++lRd s +++++r +vd+i+r+la+e +++ l+v++v
  EPX72199.1  6 ISDHPVVNELISVLRDLSLKPSQVRGVVDEISRFLAYESTKS-LNVSSV 53
                589*************************************98.888765 PP

  == domain 2  score: 166.9 bits;  conditional E-value: 4.3e-53
     UPRTase  67 ekialVpilRaGegmeealrellpearvghlglqreeetlepveyynkLPkkiaertvlllDpviaTGgsaaaaiqlLkergvgeekIlvlsvlaseeg 165
                 +++ +Vp+lR+G +m++a++++lp+++++h+g++re+++l+p eyynkLPk+ + + +++lDpv+aTGg+a+a+i +L+e  +g ++I+++ vlas+++
  EPX72199.1  51 SSVSIVPVLRSGMSMMSAFSKVLPDVPIYHIGIFREKSSLQPIEYYNKLPKH-STEVAIVLDPVMATGGTAQAVITTLQE--WGCKHIVFVGVLASAQA 146
                 5799***********************************************9.6899***********************..6678************* PP

     UPRTase 166 vkrlaeefpkvkvvtaavDeeldekgyivpGlGDfGDRlFgT 207
                 v+r+  + p+v++v +a+D+ lde+gy+vpG+GD+GDRl+g+
  EPX72199.1 147 VARFK-NTPNVEFVFGAIDKSLDEQGYLVPGIGDIGDRLYGA 187
                 **986.78********************************96 PP

>> Pribosyltran  Phosphoribosyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.0     7e-09   6.3e-05      14     128 ..      36     145 ..      29     165 .. 0.83

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 7e-09
                   EEEETTEEEEEE--GGGEEEEEEETTTHHHHHHHHHHS.TT-EE-EEEEEE-TTT--EE........EE----TTSEEEEE-SEESSSHHHHHHHHH CS
  Pribosyltran  14 avarlaaeileeyngkpdvvvgiargGvpfakiladeL.evplayvrkvkyrpdgseeaargssdesrlledpagkkVliVDDildtGgTllaalel 109
                   + ++la+e  ++ n + + +v+++r G+ + ++ ++ L +vp+  + + +  ++ ++          ++l++   +  ++ D +++tGgT +a++  
    EPX72199.1  36 ISRFLAYESTKSLNVSSVSIVPVLRSGMSMMSAFSKVLpDVPIYHIGIFREKSSLQPIEY------YNKLPKHSTEVAIVLDPVMATGGTAQAVITT 126
                   567899999999**************************9999998888877766666554......35999************************** PP

                   HHCC-BSEEEEEEEEE-HH CS
  Pribosyltran 110 Lkekgpeevriavlvdkpa 128
                   L e g++ + ++ +++  +
    EPX72199.1 127 LQEWGCKHIVFVGVLASAQ 145
                   *******665555554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       448  (0.0249875); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.28s 00:00:00.76 Elapsed: 00:00:00.46
# Mc/sec: 1243.37
//
Query:       EPX72200.1  [L=400]
Description: DUF1688 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     4e-147  490.3   0.0   4.5e-147  490.1   0.0    1.0  1  DUF1688    Protein of unknown function (DUF1688)
  ------ inclusion threshold ------
      0.026   14.1   0.0        0.9    9.1   0.0    2.1  2  Q_salvage  Potential Queuosine, Q, salvage protein family


Domain annotation for each model (and alignments):
>> DUF1688  Protein of unknown function (DUF1688)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  490.1   0.0    5e-151  4.5e-147       2     422 .]       9     400 .]       8     400 .] 0.97

  Alignments for each domain:
  == domain 1  score: 490.1 bits;  conditional E-value: 5e-151
     DUF1688   2 LrslkavRerckkvlelakegklehfdvdeskleevadfvvkvikrdygpdlksiPphgRwrHfevggvdriaelleklkkek.delekarrliDLflv 99 
                 ++sl+ +R +++kvl++a++++l+ f +d++kl++vadfvv++i++d++ ++++iPphgRw+Hfevg+++r+++l++ ++++  ++le ++r++D++++
  EPX72200.1   9 ILSLQNIRLKAQKVLAVAEKNELQAFVYDPTKLNAVADFVVSIIQADFKGKYETIPPHGRWQHFEVGNNPRLTQLIDVWTDQGvSSLEVCKRVLDITFL 107
                 5799****************************************************************************98889************** PP

     DUF1688 100 svLLDagagekwkykekesgekykrseGlavaslemFkaglfssdeeeklrvdaegLkkltaeklakalqvseenplvGlegRaelLkrLgealeekpe 198
                 svLLDagag++w+y +    e+y+rseGlavasl++F++g+fs++++++++vd+++L++l++e+la+++qvs++np++G+egRa++L+ Lg++l     
  EPX72200.1 108 SVLLDAGAGDAWSYLDGV--ERYSRSEGLAVASLRCFEKGMFSQNPKNPHQVDGAALSNLKTEALAEGFQVSKQNPIAGIEGRASILRALGNQL----- 199
                 ***************964..58************************************************************************..... PP

     DUF1688 199 vfgeegrpgnlvdyllskakekasskkeveleelwevlleglapiWpasrtkidgvslGDvWplsalkkskeeeeeslvpfHkLsqWltYSLleplekl 297
                    +++rp+ ++d +  +      s++ +++e+lw+ l+++l+piWp +rtk +g+++GD+W ls++        +s++pfHkL+qWltYSLl+pl++l
  EPX72200.1 200 ---KDSRPSFFMDSIFPTG---DFSSECLNVETLWSELQRVLMPIWP-ERTKYEGENIGDAWYLSTI--------DSIQPFHKLTQWLTYSLLVPLNRL 283
                 ...4579999******666...56899********************.******************9........68********************** PP

     DUF1688 298 lglkvegleeltgLpeYrNGGLlvDlgvltlkkealerglkkseeelpafeasdevivewRalTvalLDelaeevrekle.lsaeeLsLaqvLeagtWk 395
                 l++++ +   ltgLpeYrNGGL+vDlgvl+l++e            ++++e+ + vivewRa+T++lLD+l + v+e+l+ + ++ LsLaq+Leag+Wk
  EPX72200.1 284 LHVQIVNETLLTGLPEYRNGGLFVDLGVLKLRPEYPV---------TEEYEPGSVVIVEWRAMTIVLLDKLLNLVNERLQeELKAPLSLAQMLEAGSWK 373
                 *********************************9888.........789*******************************66789************** PP

     DUF1688 396 aGReiAkekrpetkepPieiesDgtvF 422
                 +GR iA++ rp+++++Pi i+sDgt+F
  EPX72200.1 374 SGRIIARKLRPTSAGSPILIKSDGTLF 400
                 *************************99 PP

>> Q_salvage  Potential Queuosine, Q, salvage protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.0    0.0001       0.9      62     116 ..     155     209 ..     132     231 .. 0.88
   2 ?    2.9   0.0    0.0074        66     184     247 ..     297     356 ..     264     383 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.0001
   Q_salvage  62 pitdpeflsketeeelkkvfrsateeeiplleeRlellreagkvllekfdgsfvn 116
                 + +d + ls++++e l++ f+ +++++i  +e R+++lr +g+ l ++  + f++
  EPX72200.1 155 HQVDGAALSNLKTEALAEGFQVSKQNPIAGIEGRASILRALGNQLKDSRPSFFMD 209
                 5567788999999********************************9987776665 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.0074
   Q_salvage 184 fADyrvpqvLrqlgvLeyseeLekklkekellesgseeeveiRacsiwavelireeiekkkeea 247
                   +yr   +++ lgvL+  +e       +e+ e gs   ve Ra++i+  +++ + ++++ +e+
  EPX72200.1 297 LPEYRNGGLFVDLGVLKLRPEY----PVTEEYEPGSVVIVEWRAMTIVLLDKLLNLVNERLQEE 356
                 5556666666666666665554....345788999******************99999988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (400 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       390  (0.0217525); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 2715.94
//
Query:       EPX72201.1  [L=437]
Description: GTP cyclohydrolase II [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.2e-86  287.3   0.0    8.1e-86  286.7   0.0    1.3  1  GTP_CH_N         GTP cyclohydrolase N terminal
    4.6e-16   58.8   0.0    6.6e-16   58.3   0.0    1.2  1  GTP_cyclohydro2  GTP cyclohydrolase II


Domain annotation for each model (and alignments):
>> GTP_CH_N  GTP cyclohydrolase N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  286.7   0.0     9e-90   8.1e-86       3     193 .]      30     220 ..      28     220 .. 0.99

  Alignments for each domain:
  == domain 1  score: 286.7 bits;  conditional E-value: 9e-90
    GTP_CH_N   3 vvlttypeqsgikpiplkWgakdakeRGpvvasrkksslkkrnaiGahsGsYsvYralavasgkldaehkpdltntepavkigpqpsWsdpkkivslDp 101
                 vvlttyp+q++++p+pl+Wga+++++RGp+ ++r+ ++l +rnaiGah+GsY+vY++lava g l a+h+pd+t tep++++++  sW+d++kiv++Dp
  EPX72201.1  30 VVLTTYPTQNKSDPFPLNWGASSPQKRGPITVARSIETLPHRNAIGAHGGSYCVYNSLAVAGGFLPADHHPDFTLTEPTFDVPKVASWHDKNKIVAMDP 128
                 89************************************************************************************************* PP

    GTP_CH_N 102 fghlvaevfkeelekgldirPtiavtkahlklpelkeavkkgrlkvDGkivlkskgevavtkvavepvWyLPgvaeRfgiseeeLRralfee 193
                 +gh +++ fke+lekg+dirPtia+t+a+++++e++++v++g+lkvDGkivl+++g++avtkvavepvWyLPgvaeRf+++e +LRralfe+
  EPX72201.1 129 YGHDTPRYFKEYLEKGYDIRPTIAITRANIRVTEIQRSVENGSLKVDGKIVLNKEGDIAVTKVAVEPVWYLPGVAERFDVDEITLRRALFEQ 220
                 ******************************************************************************************96 PP

>> GTP_cyclohydro2  GTP cyclohydrolase II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.3   0.0   7.4e-20   6.6e-16      37     162 ..     252     394 ..     226     395 .. 0.89

  Alignments for each domain:
  == domain 1  score: 58.3 bits;  conditional E-value: 7.4e-20
                      ...........EEEEEE--HHHHHS-B--TTTTTHH....HHHHHHHHHH-.EEEEEE--TTTTTHHHHHHHHHHHHHCT--HHH....HHHHH CS
  GTP_cyclohydro2  37 i........pvlvRvHsecltgDvlgslrcdcgeql....dealeliaeegrGvlvylrqegrgigllnklkayalqdeglDTve....anlal 114
                      +        ++ vRvH ec  +Dv++s  c c++ l    +ea++  ++ g+G +vy r+egr  g + k   y+ +++  DT +      ++l
       EPX72201.1 252 PeylsdptkKLAVRVHDECNGSDVFQSDICTCRPYLvfgiEEAAKEAQNGGAGLVVYYRKEGRALGEVVKYLVYNKRKRTGDTADqyfrRTEEL 345
                      455666666789**********************98666688999998999*********************************9998888999 PP

                      T--S-----HHHHHHHHHTT--EE.EEE-S-HHHHHHHCTT....SEEE CS
  GTP_cyclohydro2 115 glpadardygiaaqILkdlgvkki.rLlTnnpekveaLegfgievverv 162
                         +d+r   +   IL+ +g++ki r+l+ ++ k++a+ + gi + +rv
       EPX72201.1 346 AGVRDMRFQALMPDILHWFGITKIdRMLSMSNMKYDAIVNSGIPILQRV 394
                      9999********************88*******************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (437 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       292  (0.0162865); expected 358.6 (0.02)
Passed bias filter:                      278  (0.0155056); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.45
# Mc/sec: 2938.69
//
Query:       EPX72202.1  [L=549]
Description: transcription factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-07   31.2   7.6    4.6e-07   29.8   7.6    1.7  1  Zn_clus   Fungal Zn(2)-Cys(6) binuclear cluster domain


Domain annotation for each model (and alignments):
>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.8   7.6   2.6e-11   4.6e-07       2      38 ..      23      63 ..      22      65 .. 0.91

  Alignments for each domain:
  == domain 1  score: 29.8 bits;  conditional E-value: 2.6e-11
                S-HHHHHCT---STSSSS.....-HHHHHCTHHHCCCCTCCC CS
     Zn_clus  2 aCdnCrkkKvKCdakkPa.....CsnCkklnleCtfysessk 38
                aCd+Crk+K++C a+ P      C +C++l+leC+   +ss+
  EPX72202.1 23 ACDSCRKQKTRCLAGPPDdedrtCLRCRSLQLECS-LAKSSQ 63
                9*************999889999************.777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (549 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       516  (0.0287802); expected 358.6 (0.02)
Passed bias filter:                      349  (0.0194657); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 3823.79
//
Query:       EPX72203.1  [L=219]
Description: uracil phosphoribosyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.5e-68  227.9   0.0    9.5e-68  227.7   0.0    1.0  1  UPRTase   Uracil phosphoribosyltransferase


Domain annotation for each model (and alignments):
>> UPRTase  Uracil phosphoribosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  227.7   0.0   5.3e-72   9.5e-68       3     207 .]      16     218 ..      13     218 .. 0.97

  Alignments for each domain:
  == domain 1  score: 227.7 bits;  conditional E-value: 5.3e-72
     UPRTase   3 shpllkakltilRdastsrkdfrelvdriarllaeealsallpveevtvttplgkeysgelldeekialVpilRaGegmeealrellpearvghlglqr 101
                 ++  l +++ti+Rd++ts+++f+++++ i+++l+ eal+  +p+++  + +  g +y+g    + ki++V+ilRaGe+me++l+++++++++g++++qr
  EPX72203.1  16 QTVYLLSLMTIIRDKDTSHSEFVRTSNMIINMLVQEALNY-VPMKKRLIVSGSGGTYNGLEPAQ-KICGVSILRAGESMEHGLNAAFQSVPIGKILIQR 112
                 6677889********************************9.*****************987665.********************************** PP

     UPRTase 102 eeetlepveyynkLPkkiaertvlllDpviaTGgsaaaaiqlLkergvgeekIlvlsvlaseegvkrlaeefpkvkvvtaavDeeldekgyivpGlGDf 200
                 +e t e+++ ++kLPk+i+   v+l+Dp++aTG+s + a+q L+++gv+ee+I++l+++++++g++++ ++fp++k+vtaa+D+el++++y++pG+GDf
  EPX72203.1 113 DELTFESKLLFCKLPKNIETYLVFLMDPLLATGNSSILAVQALLRKGVPEENIVFLNLICCSQGIENIGKQFPRLKLVTAAIDPELNDQRYVLPGCGDF 211
                 *************************************************************************************************** PP

     UPRTase 201 GDRlFgT 207
                 GDR+FgT
  EPX72203.1 212 GDRYFGT 218
                 ******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       279  (0.0155614); expected 358.6 (0.02)
Passed bias filter:                      258  (0.0143901); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1557.05
//
Query:       EPX72204.1  [L=569]
Description: uracil permease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   1.4e-164  548.1  41.5   1.6e-164  547.9  41.5    1.0  1  Transp_cyt_pur  Permease for cytosine/purines, uracil, thiami


Domain annotation for each model (and alignments):
>> Transp_cyt_pur  Permease for cytosine/purines, uracil, thiamine, allantoin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  547.9  41.5  8.8e-169  1.6e-164       1     440 []      42     493 ..      42     493 .. 1.00

  Alignments for each domain:
  == domain 1  score: 547.9 bits;  conditional E-value: 8.8e-169
  Transp_cyt_pur   1 pvpeeeRtwktlnlfsiWlganlnintwvigalglalgLnwwqsvlviivgnligaifvallglaGakyGlpfpilsRasfGirgsllplllrvv 95 
                     pvp ++R w+ +n++s+Wl++++nintw+i+a++++ gLnww+++++++vg++i++ ++a +g+ Ga y+++fp+lsR sfGi+gs++p+l+r  
      EPX72204.1  42 PVPSSKRLWGYWNYVSFWLAESVNINTWMISATAIEAGLNWWEAWICVWVGYMICGLLIAATGRPGAVYHISFPVLSRCSFGIWGSFWPVLNRSA 136
                     8********************************************************************************************** PP

  Transp_cyt_pur  96 iaivwfgvqawiGsealllmlgkifgkwleigg..ailgtsltelvtffifwvvslvivllgvskirkffviaallvpvaafgfliwalvkaeg. 187
                     +a++wfgv awiG+e+++lm+++i++++++i +   ++gt+++++v+ffifw+vs+v+++++v++ir++f+++a+++p+aa++fliwalvka+g 
      EPX72204.1 137 MACIWFGVHAWIGGECVVLMIRSIWPSFSHIHNtmEKSGTQTYQWVGFFIFWLVSNVAIWFPVHQIRHLFTMKAFIAPPAAVAFLIWALVKAKGa 231
                     *********************************999*********************************************************** PP

  Transp_cyt_pur 188 Gpvldkavklgkse...lflsavagvlagfatlilnapDFtryaktkkssvkiqlvavpllftlllligilvaaaakaayganawspldilakfd 279
                     Gpv++++++l+++e    +++++++vl+gfatl++n pDF+r+a+t++++ ++q+++vpl f +++ligilv++a+k++yg  +w+p+++l  f+
      EPX72204.1 232 GPVIHEPTRLSTWEhgwTVVNGIVTVLDGFATLAVNSPDFARFATTPNANRWPQIITVPLSFGITSLIGILVSSASKSIYGNAYWDPTELLSAFL 326
                     ***********8899*99***************************************************************************** PP

  Transp_cyt_pur 280 et.......agvllililvalaqlgvnisanllsagldlaallPkkinikrgsliaavialvivpwkllssssklftaflsllavflspvagvii 367
                     ++       agv++i++ +++aqlg+n++an++sag+d++allP+  n++rg++ a++ia++++pw+llsss++ ft++ls ++vf+s++ag++i
      EPX72204.1 327 NHsnahgvrAGVFFIAFGLCVAQLGTNVAANSVSAGNDVSALLPTVFNVRRGAYLASIIAICMCPWNLLSSSNN-FTTYLSSYSVFMSAFAGIFI 420
                     **************************************************************************.******************** PP

  Transp_cyt_pur 368 adyfvvrrgylklaalytrrrgsaYwyrkgvNwravaayivGiaaglvgvagsvgikvvkgaeklfdlsylvG 440
                     adyf++r+gy++  +ly++  +s Y++ kg+N+r +++yi+G+++++vg+ags+g+kv++ a+++f+l+y++G
      EPX72204.1 421 ADYFIIRKGYIRTSHLYRADDSSCYYFYKGINFRGFVSYICGMLINIVGMAGSTGQKVPAAANTMFNLNYFLG 493
                     ***********************************************************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (569 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       499  (0.027832); expected 358.6 (0.02)
Passed bias filter:                      221  (0.0123264); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 4068.12
//
Query:       EPX72205.1  [L=207]
Description: phosphoprotein phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.1e-53  178.5  13.2    1.4e-52  177.8  13.2    1.4  1  PTPLA     Protein tyrosine phosphatase-like protein, PTPLA


Domain annotation for each model (and alignments):
>> PTPLA  Protein tyrosine phosphatase-like protein, PTPLA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  177.8  13.2   7.7e-57   1.4e-52       1     163 [.      53     201 ..      53     202 .. 0.93

  Alignments for each domain:
  == domain 1  score: 177.8 bits;  conditional E-value: 7.7e-57
       PTPLA   1 QtlavlEvlhallglvrspvlttamQvasRllvvwgvvelfpelqtkspavtllllaWsvtEviRYsfyalklslgkvpklltwlRYtlfivLYPlGva 99 
                 Qtla+ Ev+h++lg+v+s+ +tt++Qv+sRl++vwgv+ lfp++ ++s ++++++laWsvtEviRY fya++l +g+vpk+l+wlRY++fivLYP+G+ 
  EPX72205.1  53 QTLALAEVFHSILGFVKSSPFTTFIQVLSRLILVWGVCFLFPQSINTSSIYIFMILAWSVTEVIRYAFYACNL-AGSVPKWLLWLRYNTFIVLYPIGAG 150
                 9******************************************98889*************************.8************************ PP

       PTPLA 100 sElvliyaalpvlkeskklsielpnklnfsfsykyflll.llllyvpglyvlythmlkqRrkvlg 163
                 sE++l+++++ ++ ++              f ++ ++++   ++y++g+y+lythm++qRrkvl+
  EPX72205.1 151 SEFLLVLKTFRIAWNT--------------FLISKIVWTaATVIYPFGFYMLYTHMISQRRKVLK 201
                 **********987633..............4455444444999********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       731  (0.0407719); expected 358.6 (0.02)
Passed bias filter:                      283  (0.0157845); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1525.38
//
Query:       EPX72206.1  [L=98]
Description: Sm snRNP core protein Smd3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.7e-17   60.4   0.1    1.2e-16   60.2   0.1    1.1  1  LSM       LSM domain
  ------ inclusion threshold ------
        0.2   12.0   0.0       0.27   11.6   0.0    1.2  1  Kringle   Kringle domain


Domain annotation for each model (and alignments):
>> LSM  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.2   0.1   1.3e-20   1.2e-16       2      66 ..       7      70 ..       6      71 .. 0.97

  Alignments for each domain:
  == domain 1  score: 60.2 bits;  conditional E-value: 1.3e-20
                HHHHTTTSEEEEEETTSEEEEEEEEEEETTSEEEEEEEEEEETTETEEEEEEEEEEEGGGEEEEE CS
         LSM  2 flkklinkkvtvelkngrelrGtLkgfDqfmNlvLedveetlkdkkekrklglvliRGnnivlis 66
                +l+++++++v  el ng ++rG+L++ +++mN++++d+++t +d+ ++ +l++v+iRG++i++++
  EPX72206.1  7 LLHESQGHIVSMELENGSTYRGKLIEAEDNMNCQMKDISVTARDG-RVSHLDQVYIRGSHIRFLI 70
                799******************************************.****************997 PP

>> Kringle  Kringle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   3.1e-05      0.27       4      32 ..      21      49 ..      19      65 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 3.1e-05
                TTSTTC-S---BBTTS-BBE-TTSCSSSC CS
     Kringle  4 gnGesYrGtvsttesgaeCqaWdsetphk 32
                +nG++YrG++ ++e  ++Cq+ d +++ +
  EPX72206.1 21 ENGSTYRGKLIEAEDNMNCQMKDISVTAR 49
                79******************988777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       354  (0.0197445); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.29s 00:00:00.70 Elapsed: 00:00:00.45
# Mc/sec: 656.55
//
Query:       EPX72207.1  [L=376]
Description: cytosolic thiouridylase subunit Ctu2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-13   51.5   1.4      1e-13   51.5   1.4    2.8  2  CTU2        Cytoplasmic tRNA 2-thiolation protein 2
    2.4e-06   27.4   0.6     0.0067   16.2   0.0    2.8  4  ATP_bind_3  PP-loop family
  ------ inclusion threshold ------
       0.69   10.0  10.4          3    8.0   0.5    3.1  3  DZR         Double zinc ribbon
        1.5    9.2   7.7        2.7    8.4   2.0    3.0  3  C1_2        C1 domain
        7.1    6.5   8.1       0.34   10.7   1.2    2.4  3  PADR1       PADR1 (NUC008) domain


Domain annotation for each model (and alignments):
>> CTU2  Cytoplasmic tRNA 2-thiolation protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.3      0.86   3.1e+03      41      55 ..      25      39 ..       6      68 .. 0.59
   2 !   51.5   1.4   2.8e-17     1e-13       1     110 [.     277     356 ..     277     358 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.86
        CTU2 41 eletsekCalCglpl 55
                  +++ +C  C +++
  EPX72207.1 25 MSRSEYTCDGCFVRS 39
                244566666666665 PP

  == domain 2  score: 51.5 bits;  conditional E-value: 2.8e-17
        CTU2   1 sIqrLtekFilklekdfpstvstvvrTgeKLvknksseeaeletsekCalCglplddkakewkrtitiselseteseeekeelekakeeeeeeaeeeel 99 
                 +I  + e+++++l++ fps v+tvvr ++KL+ ++         +++C+lC+lp++++a++w +++t+++ se++++                      
  EPX72207.1 277 TISGVAENYFTNLNNHFPSLVNTVVRMSSKLGVPE--------VQKTCSLCKLPMQENAEAWLQKTTVQHPSERQEDAAA------------------- 348
                 68999*****************************6........579***********************99977666441................... PP

        CTU2 100 aeeeeeLCYgC 110
                    ++++CY+C
  EPX72207.1 349 ---NPDICYAC 356
                 ...13466666 PP

>> ATP_bind_3  PP-loop family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       1.2   4.5e+03     135     150 ..      45      60 ..      14      61 .. 0.71
   2 !   16.2   0.0   1.9e-06    0.0067       2      68 ..      63     134 ..      62     148 .. 0.60
   3 !    8.5   0.0   0.00042       1.5      82     164 ..     183     267 ..     162     272 .. 0.89
   4 ?   -3.2   0.0       1.7   6.2e+03      39      68 ..     301     330 ..     296     346 .. 0.63

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 1.2
                 ETTCCEE-CCCT--HH CS
  ATP_bind_3 135 iasirlvRPlLkvske 150
                 + + +l+RP L+ +++
  EPX72207.1  45 RRQFELLRPNLENRRS 60 
                 3458899999988876 PP

  == domain 2  score: 16.2 bits;  conditional E-value: 1.9e-06
                 EEEE--SCHHHHHHHHHHHHHCTTTTT.......EEEEEEEE-SSSTCHHHHHHHHHHHHHHTT-EEEEEE--H CS
  ATP_bind_3   2 vlvAvSgGlDSmaLllllaklkkklgi.......klvaihvdhglreeskeeaelvkelckklnikleiekvdv 68 
                 +l+AvSgG+ Sma+l  ++ l+++ +        ++ ++h++ +  ++ +e +++++ + k +  + ++++++ 
  EPX72207.1  63 ALLAVSGGISSMAMLETAYYLSRHRKDnyrpmfdDFLVVHLQSKSLQNEEECTQTINVIKKAI--DNRYTQCKF 134
                 799***********9877666555444456877777777776666665555555555444443..333333333 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.00042
                 HHHHHHHHHCHHCCT.CEEE---BHHHHHHHHHHHHCCT--CCHHH-S-SEEEETT..CCEE-CCCT--HHHHHHHHHHTT---B CS
  ATP_bind_3  82 elRYevlkealkkegievlllAhhadDqaEtfllrlargsglaglagikeaseias..irlvRPlLkvskeeleeylkekkikwv 164
                 ++R ++l  +++ke+++ ++ +      a  +l  +a+g+g a  ++++ +s++ +  + l+RPl +v  +el++y+k k++++ 
  EPX72207.1 183 RIREQALVAIAEKEHCDTIVFGDCGTTIAARVLELVAQGRGYAIPWCTSVCSKLPEfpVSLLRPLRDVLSSELNSYMKIKQLDYL 267
                 578889999999999999999999999999999999999999999999999999776699*********************9995 PP

  == domain 4  score: -3.2 bits;  conditional E-value: 1.7
                 SSTCHHHHHHHHHHHHHHTT-EEEEEE--H CS
  ATP_bind_3  39 lreeskeeaelvkelckklnikleiekvdv 68 
                 +r +sk     v++ c+  +++++ +   +
  EPX72207.1 301 VRMSSKLGVPEVQKTCSLCKLPMQENAEAW 330
                 566666666677777777777776555555 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   1.0    0.0015       5.5      12      34 ..      12      35 ..       3      43 .. 0.75
   2 ?   -2.8   0.1       1.9   6.8e+03      17      23 ..     205     211 ..     204     234 .. 0.67
   3 ?    8.0   0.5   0.00082         3       9      39 ..     310     361 ..     305     365 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0015
         DZR 12 arfCseCgtklkavaa.edrCpsC 34
                   C++C+++   +++ e++C+ C
  EPX72207.1 12 VFLCKKCKKQATVMSRsEYTCDGC 35
                347999999988777789999999 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.9
         DZR  17 eCgtklk 23 
                 +Cgt++ 
  EPX72207.1 205 DCGTTIA 211
                 5777764 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.00082
         DZR   9 ppdarfCseCgtklkavaa.....................edrCpsCgekvd 39 
                 p+ +++Cs C+ ++++ a+                     +d C +C+ +++
  EPX72207.1 310 PEVQKTCSLCKLPMQENAEawlqkttvqhpserqedaaanPDICYACSVSLK 361
                 566799********987779***************************87665 PP

>> C1_2  C1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   2.0   0.00076       2.7      13      38 ..       7      35 ..       3      38 .. 0.78
   2 ?    2.5   0.0     0.051   1.8e+02      18      29 ..     313     324 ..     306     327 .. 0.82
   3 ?   -2.1   0.1       1.4   4.9e+03      20      25 ..     352     357 ..     343     362 .. 0.66

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00076
        C1_2 13 edssesfnCsaCgrk...idgffYsCseC 38
                +d +  f C+ C+++   ++ ++Y+C+ C
  EPX72207.1  7 NDNDRVFLCKKCKKQatvMSRSEYTCDGC 35
                4566679********87666666***999 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.051
        C1_2  18 sfnCsaCgrkid 29 
                 +++Cs+C+ +++
  EPX72207.1 313 QKTCSLCKLPMQ 324
                 689*****9975 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 1.4
        C1_2  20 nCsaCg 25 
                  C aC 
  EPX72207.1 352 ICYACS 357
                 455554 PP

>> PADR1  PADR1 (NUC008) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   1.2   9.5e-05      0.34      16      36 ..      15      35 ..      11      40 .. 0.91
   2 ?   -2.8   0.0       1.6   5.7e+03      39      46 ..     128     135 ..     125     137 .. 0.81
   3 ?   -3.9   0.3       3.5   1.3e+04      15      20 ..     315     320 ..     314     323 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 9.5e-05
       PADR1 16 CpeCkegqlvfdssgYkCtGn 36
                C++Ck+   v+++s+Y+C G 
  EPX72207.1 15 CKKCKKQATVMSRSEYTCDGC 35
                *****999999999****995 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.6
       PADR1  39 ewtkCtfk 46 
                  +t+C+f+
  EPX72207.1 128 RYTQCKFE 135
                 69999986 PP

  == domain 3  score: -3.9 bits;  conditional E-value: 3.5
       PADR1  15 kCpeCk 20 
                  C+ Ck
  EPX72207.1 315 TCSLCK 320
                 699998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (376 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       932  (0.0519828); expected 358.6 (0.02)
Passed bias filter:                      555  (0.0309554); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 2746.47
//
Query:       EPX72208.1  [L=142]
Description: ribosomal protein subunit L51 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      2e-10   40.5   0.0      4e-10   39.5   0.0    1.5  2  L51_S25_CI-B8  Mitochondrial ribosomal protein L51 / S25 / CI


Domain annotation for each model (and alignments):
>> L51_S25_CI-B8  Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.5   0.0   2.2e-14     4e-10       1      51 [.      39      89 ..      39      90 .. 0.97
   2 ?   -3.3   0.0      0.52   9.3e+03      13      19 ..     116     122 ..     115     123 .. 0.75

  Alignments for each domain:
  == domain 1  score: 39.5 bits;  conditional E-value: 2.2e-14
                   HHHHHTTTTHHHHTT-TTSEEEEEESS-SS-EEEEE-SS--B--EE-SS-- CS
  L51_S25_CI-B8  1 aRkFwrknLprlkykNPavpivvrrrsgdgPallaiYfngrektidlknkn 51
                   +++F++k+L ++++   ++++ v +r+g +P ++a Y++grekti+ + ++
     EPX72208.1 39 MKEFLTKKLASIAKDSQDIEFHVYNRQGVHPLIRAFYNTGREKTICTRKMD 89
                   79*********************************************9986 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 0.52
                    HTT-TTS CS
  L51_S25_CI-B8  13 kykNPav 19 
                    ++ NP+v
     EPX72208.1 116 QSTNPSV 122
                    6789988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       417  (0.0232584); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.44
# Mc/sec: 980.38
//
Query:       EPX72209.1  [L=481]
Description: outer membrane protein Mdm34 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.27   11.2   0.6       0.56   10.2   0.6    1.5  1  PilP      Pilus assembly protein, PilP


Domain annotation for each model (and alignments):
>> PilP  Pilus assembly protein, PilP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.6   3.1e-05      0.56       7      60 ..     357     410 ..     353     429 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 3.1e-05
        PilP   7 aevkarpkgkieplpeikpyeafaYsaaelrdPFkppkeeeeekkekakksslq 60 
                 ++vk+r+  +++p +++kp  + + sa+++ dPF  +++++++k+++a ++sl+
  EPX72209.1 357 EQVKKRHVIRLQPSKTVKPSPSNTNSATHNSDPFVCESQSSANKEKSAVEDSLE 410
                 689999********************************9999988877665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (481 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       573  (0.0319594); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 3266.61
//
Query:       EPX72210.1  [L=486]
Description: BAR adaptor protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.2e-44  151.0   9.4    4.2e-44  151.0   9.4    1.9  2  BAR           BAR domain
    2.5e-13   49.7   0.1    1.1e-12   47.6   0.1    2.1  2  SH3_9         Variant SH3 domain
    7.1e-13   47.9   0.2      2e-12   46.5   0.2    1.8  1  SH3_1         SH3 domain
    1.1e-07   31.4   0.0    2.3e-07   30.4   0.0    1.5  1  SH3_2         Variant SH3 domain
  ------ inclusion threshold ------
      0.065   12.2   0.1        0.1   11.5   0.1    1.2  1  DUF818        Chlamydia CHLPS protein (DUF818)
        1.1    9.4  12.0       0.51   10.4   5.9    2.4  2  UPF0242       Uncharacterised protein family (UPF0242) N-term


Domain annotation for each model (and alignments):
>> BAR  BAR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.0   9.4   1.4e-47   4.2e-44       1     234 [.       1     225 [.       1     229 [. 0.94
   2 ?    0.1   0.1      0.17   5.2e+02     175     228 ..     369     420 ..     351     424 .. 0.69

  Alignments for each domain:
  == domain 1  score: 151.0 bits;  conditional E-value: 1.4e-47
         BAR   1 lkKafnRasqlleekvgkaekTk.LDedFeelerrldvteklieklvkelkeylqanpgarakqivleklkeqplelLaesmieagkelgedssfgkal 98 
                 ++K+f+R+sq+++e +g++++++ L++dF+el r+++   + iekl++  ++++q++   + +    e+ k +p++ L++s++++g  l++ s  + ++
  EPX72210.1   1 MNKHFARLSQWTGERFGFDRQKTtLSDDFCELQREMELRFTGIEKLHQNFNQWVQSMGRKKSSLD--EQEKALPVTALGDSFLNLGYILSNYSVHSDTY 97 
                 79****************987666*******************************5544444433..445***************************** PP

         BAR  99 ekygeavkklaqteeelekrvetnfldplrellekefkeiqkerkklehkrlDyDaakarlkklktkkskkakdeekaeeelrkAqqkfeesneelkae 197
                 ++yg+++ +++ ++e++   v+++ ++ l+e l ++ k ++ + kkle++rl +Da +++++k+k+++sk        eeelr+A+ k+e + e+++++
  EPX72210.1  98 NMYGKTLIQIGALQENFVRFVTESYMKELNEWL-SQKKVLEMKEKKLENRRLVFDALSTKIQKAKKEDSKI-------EEELRMARGKYETTLEDFEER 188
                 *********************************.*******************************777766.......********************* PP

         BAR 198 Lpnllalevefvnqlqafveaqldfhkqaaqlleqlq 234
                 + +l +le ++vn+l  +v+ q +fh+q++++l+ l+
  EPX72210.1 189 MIELRELESSQVNKLILLVRKQTQFHEQCLNVLRPLE 225
                 *********************************9887 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.17
         BAR 175 kaeeelrkAqqkfeesneelkaeLpnllalevefvnqlqafveaqldfhkqaaq 228
                     e+  +++ +e+++e + ++ ++l  + v++++ l+  v++++++  q+ +
  EPX72210.1 369 SSLSEMPTSTNSYEKQKEFANQRSKSL-PSVVPHHRGLE-VVRMKYQYEPQMED 420
                 34789999999***9999888887777.77788887775.56677666666655 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       2.3   6.8e+03      18      35 ..      13      33 ..      12      38 .. 0.64
   2 !   47.6   0.1   3.8e-16   1.1e-12       2      47 ..     411     463 ..     411     464 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 2.3
       SH3_9 18 GDvitviee...sedgWlegs 35
                G+++ + ++    +d+++e +
  EPX72210.1 13 GERFGFDRQkttLSDDFCELQ 33
                677777744333379999866 PP

  == domain 2  score: 47.6 bits;  conditional E-value: 3.8e-16
       SH3_9   2 lypyepreddeLsLqrGDvitvieesedgWlegs.......ltGrtGlvPany 47 
                 +y yep+ +deL L ++D+++v+++ +dgW+ g+       ltG+tGl+P+n+
  EPX72210.1 411 KYQYEPQMEDELALKKNDILLVLKKVNDGWWVGEqlnddgsLTGNTGLFPSNF 463
                 599******************************988776655**********8 PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.5   0.2   6.6e-16     2e-12       4      48 .]     412     461 ..     410     461 .. 0.96

  Alignments for each domain:
  == domain 1  score: 46.5 bits;  conditional E-value: 6.6e-16
                 SSBEXSSTTBXEBSTTEEEEEEEECSSSEEEEEETTS.....TEEEEEEG CS
       SH3_1   4 YDYeaeesdELsfkkGDviivleksedgWwkgrlkgt.....gkeGliPs 48 
                 Y Ye++++dEL +kk+D++ vl+k++dgWw g+  ++     g +Gl+Ps
  EPX72210.1 412 YQYEPQMEDELALKKNDILLVLKKVNDGWWVGEQLNDdgsltGNTGLFPS 461
                 99*******************************99988999999*****8 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   0.0   7.8e-11   2.3e-07       3      53 ..     409     463 ..     407     465 .. 0.90

  Alignments for each domain:
  == domain 1  score: 30.4 bits;  conditional E-value: 7.8e-11
                 EESS-B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEE.C......CCEEEEEGCG CS
       SH3_2   3 raiedyvgedkseLsfkkGdvikvlslgskdsdgwwegev.g......GrvGlfPssl 53 
                 r   +y+++ ++eL +kk+d++ vl   +k +dgww ge  +      G  GlfPs++
  EPX72210.1 409 RMKYQYEPQMEDELALKKNDILLVL---KKVNDGWWVGEQlNddgsltGNTGLFPSNF 463
                 66668********************...9*********9987789999999*****97 PP

>> DUF818  Chlamydia CHLPS protein (DUF818)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   3.5e-05       0.1      87     137 ..     113     163 ..      98     168 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 3.5e-05
      DUF818  87 rakkilreaflkalkdllskkevssvkRvviqqDdlliDtleiklseakpd 137
                 + ++ + e+++k+l+++ls+k+v ++k   +    l+ D+l+ k+ +ak++
  EPX72210.1 113 NFVRFVTESYMKELNEWLSQKKVLEMKEKKLENRRLVFDALSTKIQKAKKE 163
                 55677899****************************************986 PP

>> UPF0242  Uncharacterised protein family (UPF0242) N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.4     0.062   1.8e+02     115     167 ..      11      66 ..       2      71 .. 0.73
   2 ?   10.4   5.9   0.00017      0.51      75     149 ..     121     194 ..      83     219 .. 0.71

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.062
     UPF0242 115 lkeenqqLqekleaiaedfeelkleleeqLaekqellqeyqetiee...qrsvlek 167
                  + e   +  ++   + df el++e+e +    ++l+q++++ +++   ++s+l++
  EPX72210.1  11 WTGERFGFDRQKTTLSDDFCELQREMELRFTGIEKLHQNFNQWVQSmgrKKSSLDE 66 
                 55666678889999999**********99988888888877665541115666665 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00017
     UPF0242  75 aklteldeglktkeealeelqeeeeeLkeeldakeeelerlkeenqqLqekleaiaedfeelkleleeqLaekqe 149
                 + ++el+ +   +++ le  +++ e+++  +da ++++++ k+e+ +++e+l ++   +e  + + ee++ e +e
  EPX72210.1 121 SYMKELN-EWLSQKKVLEMKEKKLENRRLVFDALSTKIQKAKKEDSKIEEELRMARGKYETTLEDFEERMIELRE 194
                 3444444.3444556778888888888888999999999999999999999999888888888888777654333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (486 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1417  (0.079034); expected 358.6 (0.02)
Passed bias filter:                      569  (0.0317363); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.42
# Mc/sec: 3474.80
//
Query:       EPX72211.1  [L=920]
Description: sterol regulatory element binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-61  207.8   0.9    2.6e-61  207.3   0.9    1.2  1  DUF2014   Domain of unknown function (DUF2014)
    5.9e-18   64.6   0.5    1.2e-17   63.6   0.5    1.6  1  HLH       Helix-loop-helix DNA-binding domain
  ------ inclusion threshold ------
      0.011   15.8   0.1      0.031   14.4   0.1    1.7  1  bZIP_1    bZIP transcription factor


Domain annotation for each model (and alignments):
>> DUF2014  Domain of unknown function (DUF2014)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  207.3   0.9   4.3e-65   2.6e-61       5     262 ..     533     778 ..     529     779 .. 0.95

  Alignments for each domain:
  == domain 1  score: 207.3 bits;  conditional E-value: 4.3e-65
                 XXXXXXXXX..XXXXXXXXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX........XXXXXX CS
     DUF2014   5 lslrnliGv..egyslltglte.....eqeaarvkaweialdAQLaGGdveisksrLvLtllasgtLPdtparlmlkAlhirvllwevgsagslalkva 96 
                 +++++ +++  +++s l++++e     eq++a+++++e++ldAQL+GGd+++++ rL++++++s++LP+t+++ +l+A++ ++++        +++ + 
  EPX72211.1 533 FVVKSSYNYisHRISGLYASSEtwvysEQQLADIRNLEKLLDAQLMGGDEKVNRLRLFMVFASSFFLPTTSHTSALQAMYAELIF--------SNSPMP 623
                 566666666668899999999999999**********************************************************........567899 PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXII.IITTTTGGGXXXXXXXGG..GGGHHHH.HXXXXXXSGGGGGSS--SHHHHHHHHH CS
     DUF2014  97 naiaaklarsqWneArklnkklskekeskedeLPehlaaLleq.dcddVlsddvvqraynLafnrpttenveeedegldsvveDvavrspldavAaWys 194
                 +a+++k+a++ Wn+A++l++++s++++   +eLPe++++L+e+ d++dV+s ++v+r+++L   r+t++++ + +++++s+++Dv+v+spl+++A+Wy+
  EPX72211.1 624 SALVSKCASYLWNRAKRLHNSASMQTD--LQELPECVVKLIETsDAEDVFSAWMVERLWTLS--RCTRDSA-TLSNSVISKLSDVVVMSPLETTASWYA 717
                 ********************9999988..*************99*****************9..******9.99************************* PP

                 HHHHHHHHHHHH.......HS---CHHHHHHHHHS-TTSCHHHHHHHHHHHH-CCCCHHHHHHHHHHH CS
     DUF2014 195 sqllqrvLlesLeeekeeeakkeveselelalkvaPigSaaqvrAlvakavlveekrgasiaealeal 262
                 ++ll+++L+esL       ++  ++s++e++l+++P++S ++++ lvak vl+e+ +++s+ e+l+a+
  EPX72211.1 718 ADLLDALLMESL-------DHPIEKSDIEKVLSLSPKNSPVYRHGLVAKLVLFEDGTSESLLEVLAAY 778
                 ************.......888999****************************************997 PP

>> HLH  Helix-loop-helix DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.6   0.5     2e-21   1.2e-17       1      53 []     267     339 ..     267     339 .. 0.98

  Alignments for each domain:
  == domain 1  score: 63.6 bits;  conditional E-value: 2e-21
                 HHHHHHHHHHHHHHHHHHHHHHHHHCST....................CSTTSS-STHHHHHHHHHHHHHHHH CS
         HLH   1 rraahnerErrRRdriNsaleeLrellP....................slppskKlsKaeiLekAveYIkhLq 53 
                 ++++hn++E+r+R ++N+++ eLr+ +P                    +l+p +Kl+K +iL kA+eYI+hL+
  EPX72211.1 267 KKTSHNMIEKRYRTNLNDRICELRDAVPslraaaalrcgvtleeeelhGLAPARKLNKGTILAKATEYIRHLE 339
                 799*********************************************99*********************96 PP

>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.1   5.2e-06     0.031      26      54 ..     333     361 ..     330     368 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 5.2e-06
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  26 aeieeLerrvkaLekeNksLkseleelkk 54 
                 ++i  Le+++k+L keNk L+++l  +++
  EPX72211.1 333 EYIRHLESKSKQLAKENKRLSDRLAFYED 361
                 89*******************99976665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (920 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       596  (0.0332422); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.67u 0.24s 00:00:00.91 Elapsed: 00:00:00.39
# Mc/sec: 7017.66
//
Query:       EPX72212.1  [L=200]
Description: U4/U6 X U5 tri-snRNP complex subunit Prp38 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.1e-56  188.6   0.2    9.3e-56  188.4   0.2    1.0  1  PRP38     PRP38 family


Domain annotation for each model (and alignments):
>> PRP38  PRP38 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.4   0.2   5.2e-60   9.3e-56       3     173 ..      16     176 ..      14     177 .. 0.97

  Alignments for each domain:
  == domain 1  score: 188.4 bits;  conditional E-value: 5.2e-60
       PRP38   3 lngqnptlliekivrerIleseYykenlfglkalaelvdeiveklkhieglvlggtekpstflClllKLlqlkptkkqieellnnedskYiralgllYl 101
                 +++  pt+l+ ki+rerI+e+ Y+ke++fgl+a a+l+d++v+ l++++g  +g+ ++p++f+Cll+KLlq+ p+k++++++l   ++kYiral+++Y+
  EPX72212.1  16 VHQMLPTFLVGKILRERIVECFYWKEQCFGLNA-ASLIDRAVR-LEYVGG-QYGN-QHPTEFICLLYKLLQVAPEKEIVMQYLAVPEFKYIRALAAFYI 110
                 577789***************************.*********.******.8886.55***************************************** PP

       PRP38 102 RlvlepkelykllepllnDyrklkrrekdgevdpkgvklitidelvddLltkdricgtiLprlpkrakleee 173
                 Rl+++  e+y+ lepl++Dyrkl++r+++g      + + ++de++d+L +++ +c+++Lp l +r +lee 
  EPX72212.1 111 RLTWSDPEVYQALEPLMKDYRKLRIRDHNG------FYVSHMDEFIDALFNEETVCDITLPPLMSRYQLEEL 176
                 ******************************......********************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       426  (0.0237604); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.21s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1583.64
//
Query:       EPX72213.1  [L=358]
Description: fructose-bisphosphate aldolase Fba1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-89  300.6   0.0    1.3e-89  300.4   0.0    1.0  1  F_bP_aldolase  Fructose-bisphosphate aldolase class-II


Domain annotation for each model (and alignments):
>> F_bP_aldolase  Fructose-bisphosphate aldolase class-II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  300.4   0.0   7.3e-94   1.3e-89       2     279 ..      16     356 ..      15     357 .. 0.93

  Alignments for each domain:
  == domain 1  score: 300.4 bits;  conditional E-value: 7.3e-94
                    HHHHHHHHHHHHT--EEEEE--SHHHHHHHHHHHHHHTS-EEEEE-HHHHHHHH-.............HHHHHHHHHHHHHHHHT...-EEEEEE- CS
  F_bP_aldolase   2 nlkellkkAkeegyavgafnvtnletvkavleaaeeaksPvIlqlsegaaakyag.............gaealaelvraaaeaykkasvpvalhlD 84 
                    n+ +l+++A+e+g+a++a+nvt+++tv a+leaa+ea+sP+Ilq+s+g+  ++ag             g  a+a+++r++a   +   vpv+lh D
     EPX72213.1  16 NVLKLFTYAREHGFAIPAINVTSSSTVIAALEAAREARSPIILQTSNGGSVFFAGknspndgqkasiaGCVAAAHYIRSIAPFFG---VPVVLHSD 108
                    7889**********************************************9**98***************************666...******** PP

                    ---G.....HHHHHHHHHH........S-SEEEE--TTS-HHHHHHHHHHHHHHHHHTT-EEEEE-----------....TT-TTTS--HHHHHHH CS
  F_bP_aldolase  85 Hgak.....leglkkaiea........gfsSvMiDgSelpleeNialtkevverahalgvsvEaElGriggeedgv....vaeeklyTdpeeaeef 163
                    H+a+     +eg+ +a ea        +fsS+M+D+Se+p+e+Nia++k+++era ++++++E+E+G++ggeedgv    +++++lyT+pe+++++
     EPX72213.1 109 HCAEkllpwMEGMFAADEAyfklhgepLFSSHMLDLSEEPKEQNIATVKKYCERAVQMKIWIEMEIGITGGEEDGVdnsgAEQNTLYTQPEDIWDV 204
                    ************************9999***********************************************9776555555*********** PP

                    HHHHH....-EEEE--SS---SS--SS...--THHHHHHHHHH...........--SEE-SGTTS-HHHHHHHHHTTEEEEEE-HHHHHHHHHHHH CS
  F_bP_aldolase 164 veetg....vdalAvaiGnvHGvykpk.pkLdferlkeiqkav...........vplVlHGgsgvpdeeirkaiklGvvKiNidtdlrlaytkavk 243
                    ++e++     +++A+a+GnvHGvykp+  kL++e+l ++qk+v           v +V+HGgsg++ +e+r+ ik+GvvK+Nidtd+++ay+++v+
     EPX72213.1 205 YRELSsvtpYFSIAAAFGNVHGVYKPGnVKLRPEILGDHQKYVkeqlkstndkpVFFVFHGGSGSSVNEFRTGIKSGVVKVNIDTDTQYAYLEGVR 300
                    *****9999******************555****************99998844447**************************************8 PP

                    HG...................GE-HH.H-HHHHHHHHHHHHHHHHHHHHHHTT-SS CS
  F_bP_aldolase 244 ke...................kenkk.ydprkllkeaeeamkevvkekiellgsag 279
                    ++                   k+nkk +dpr++++e+e++m++++ +++e++ +++
     EPX72213.1 301 DYvlkyqdylktpvgnpegpdKPNKKkFDPRVWVHEGEKTMTKRIITALEDFYANN 356
                    888877777777666666655488888***********************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       387  (0.0215851); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 2671.76
//
Query:       EPX72214.1  [L=138]
Description: hypothetical protein SOCG_05524 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       473  (0.0263818); expected 358.6 (0.02)
Passed bias filter:                      295  (0.0164538); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.22s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 1082.93
//
Query:       EPX72215.1  [L=471]
Description: RAN protein kinase Ran1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.5e-47  161.0   0.0    3.2e-45  154.5   0.0    2.1  1  Pkinase          Protein kinase domain
    8.4e-25   87.5   0.0    8.2e-24   84.3   0.0    2.0  1  Pkinase_Tyr      Protein tyrosine kinase
    3.7e-06   26.5   0.0      0.034   13.5   0.0    2.6  3  Kinase-like      Kinase-like
    7.8e-05   22.7   0.0    0.00012   22.1   0.0    1.4  1  APH              Phosphotransferase enzyme family
    0.00037   19.9   0.0    0.00059   19.3   0.0    1.2  1  Kdo              Lipopolysaccharide kinase (Kdo/WaaP) family
      0.002   17.8   0.0       0.23   11.1   0.0    2.3  2  FTA2             Kinetochore Sim4 complex subunit FTA2
  ------ inclusion threshold ------
      0.034   13.7   0.0      0.053   13.1   0.0    1.2  1  Choline_kinase   Choline/ethanolamine kinase
       0.23   10.4   0.0       0.42    9.5   0.0    1.4  1  Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  154.5   0.0   1.4e-48   3.2e-45       4     257 ..      20     294 ..      17     299 .. 0.83

  Alignments for each domain:
  == domain 1  score: 154.5 bits;  conditional E-value: 1.4e-48
                 EEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS.CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS..--HHH CS
     Pkinase   4 leklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklk.hpnivrlyevfeekdelylvleyveggeladllerkgs..lseee 99 
                 ++ +G G++G+Vyka +  +g  +AvK + k+  + k++    +E+ ++++++ hpni+ ly+v+ ++d++y+vl+y++ g+l++ +++k     +++ 
  EPX72215.1  20 ISVIGVGAYGVVYKAEDLYDGTLYAVKALCKDGLDAKQKLLQSKELYLHARVQsHPNILSLYRVLDTEDTIYVVLQYCPDGDLFTCITEKNLyrGNDSL 118
                 678********************************999988899********************************************77772345668 PP

                 HHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTE.EEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHH...........................T CS
     Pkinase 100 akkiakqilegleylHskgiiHrDlKpeNiLidekge.lKitDFGlakelessskltsfvgtseYlAPEvl...........................k 170
                 +k++++q++++++++Hs gi HrDlKpeNiL+d++g  + ++DFGla+  e ss  +  +g+  Y++PE                              
  EPX72215.1 119 IKHVFSQLISAVQHCHSVGIYHRDLKPENILVDNEGRtVYLADFGLATTDELSS--DYGCGSLFYMSPECQressnpnalscvgyractpltnessekP 215
                 9********************************77777**********988877..7889999999999887777777777777777777677654432 PP

                 TSCB.SHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHH CS
     Pkinase 171 eney.skkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaee 257
                 ++ + +++ DvW+lG+il++l ++++p++   +++     ++          ++  +l     is+e+ +ll+++++++pk+R++  e
  EPX72215.1 216 SSAFgTAPNDVWALGIILINLCCQRNPWKRACSQT--DGTYRS-------YVQNPSTLLSILPISRELNSLLNRIFDRNPKTRIGLLE 294
                 255578999********************333322..222222.......11222223333446*******************99766 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.3   0.0   3.6e-27   8.2e-24       2     255 ..      18     295 ..      17     299 .. 0.87

  Alignments for each domain:
  == domain 1  score: 84.3 bits;  conditional E-value: 3.6e-27
                  EEEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEE.STTSSHHHHHHHHHHHHHHHTS.-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCT CS
  Pkinase_Tyr   2 elgkklGeGafGkVvegtlkgekekkevkVavKtl.keeateeekeelleeakimkkl.khpnivkllgvctkeepllivteyvkgGdLlkfLrkkek 97 
                  ++ + +G Ga+G V++++       + +  avK l k++ ++++k    +e+ +  ++ +hpni++l+ v   e+++++v++y++ GdL + +++k+ 
   EPX72215.1  18 RFISVIGVGAYGVVYKAEDL----YDGTLYAVKALcKDGLDAKQKLLQSKELYLHARVqSHPNILSLYRVLDTEDTIYVVLQYCPDGDLFTCITEKNL 111
                  67899************988....688999****9566666665555556999999999*************************************77 PP

                  TTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE.TTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE............. CS
  Pkinase_Tyr  98 ekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse.nkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk............. 181
                   + + + + ++  q+ +++++ +s  + Hrdl   N+L+++ +++v ++DfGLa + e      +++ +  ++ +m+pE+ +e++             
   EPX72215.1 112 YRGNDSLIKHVFSQLISAVQHCHSVGIYHRDLKPENILVDNeGRTVYLADFGLATTDE-----LSSDYGCGSLFYMSPECQRESSnpnalscvgyrac 204
                  7777777888999**************************97256**********9873.....44445667899*******9999999********** PP

                  ...............EEHHHHHHHHHHHHHHHHTTSSGTTTTS.HHHH..HHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHH CS
  Pkinase_Tyr 182 ...............ftsksDvWsfGvllwEiftlgespypgl.knee..vleklkegkrlekpekcpeelyelmkkcweedpeeRptfsel 255
                                  t   DvW+ G++l+ +++  ++p+++  ++++    +++++   l     +++el++l+++ ++++p+ R  + el
   EPX72215.1 205 tpltnessekpssafGTAPNDVWALGIILINLCC-QRNPWKRAcSQTDgtYRSYVQNPSTLLSILPISRELNSLLNRIFDRNPKTRIGLLEL 295
                  **********9999667889*************9.7788877654444326667799999999999********************987766 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.62   1.4e+03      18      61 ..      21      64 ..      16      76 .. 0.77
   2 !   13.5   0.0   1.5e-05     0.034     151     189 ..     124     163 ..     106     173 .. 0.87
   3 !    9.8   0.0    0.0002      0.45     228     288 .]     221     289 ..     200     289 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.62
  Kinase-like 18 ellkkgdrsvvfevkdqetgeplavkvfllpseaskkdlerlke 61
                 ++++ g  +vv++++d + g   avk        +k++l + ke
   EPX72215.1 21 SVIGVGAYGVVYKAEDLYDGTLYAVKALCKDGLDAKQKLLQSKE 64
                 789999999********999999999877666666666655555 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 1.5e-05
  Kinase-like 151 lqlirlaanLqakglvhgkftvdnllldekgg.lmlggft 189
                   qli  +++ ++ g+ h +++++n+l d++g+ ++l +f+
   EPX72215.1 124 SQLISAVQHCHSVGIYHRDLKPENILVDNEGRtVYLADFG 163
                  699****************************768999997 PP

  == domain 3  score: 9.8 bits;  conditional E-value: 0.0002
  Kinase-like 228 thkldaWqlGlviyriwclklPltlateeakeew........kfklckkipekvkaLlkkfLqlsqedR 288
                  t + d+W+lG+    + c   P   a ++    +         +  + +i+ +++ Ll+++  ++ + R
   EPX72215.1 221 TAPNDVWALGIILINLCCQRNPWKRACSQTDGTYrsyvqnpsTLLSILPISRELNSLLNRIFDRNPKTR 289
                  7788*************************9999999999998888899999999999999998887766 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0   5.4e-08   0.00012     166     207 ..     136     176 ..      50     195 .. 0.90

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 5.4e-08
                 EEEE-SS-SGGGEEEC..TTEEEEE---TT-EEEECCHHHHC CS
         APH 166 tvllHgDlhpgNllvdpddgrvtGviDfedaglgpplyDlav 207
                  ++ H+Dl+p N+lvd ++gr +++ Df++a++     D + 
  EPX72215.1 136 VGIYHRDLKPENILVD-NEGRTVYLADFGLATTDELSSDYGC 176
                 5788************.889999**********998888765 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   2.6e-07   0.00059     117     166 ..     116     162 ..      99     168 .. 0.80

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 2.6e-07
         Kdo 117 eelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDl 166
                 ++l ++ + ++  +++  h++g++H+dl + nil+++e+   ++++l D+
  EPX72215.1 116 DSLIKHVFSQLISAVQHCHSVGIYHRDLKPENILVDNEG---RTVYLADF 162
                 556667778888899**********************98...99999998 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0     0.011        25      21      53 ..      14      48 ..       7      78 .. 0.77
   2 !   11.1   0.0    0.0001      0.23     166     204 ..     111     149 ..      89     165 .. 0.86

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.011
        FTA2 21 ekdiefleyLgkglhsiVlkvk..irgkeYALKlF 53
                +++ +f++++g g+ ++V+k++  ++g  YA+K  
  EPX72215.1 14 DDSLRFISVIGVGAYGVVYKAEdlYDGTLYAVKAL 48
                57899****************9778999*****54 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.0001
        FTA2 166 llkeqeelevsqlpkllrdlkklhklgIvvrDlkeenyi 204
                 l +++++l+   +++l++ ++  h+ gI++rDlk+en++
  EPX72215.1 111 LYRGNDSLIKHVFSQLISAVQHCHSVGIYHRDLKPENIL 149
                 667788899999************************986 PP

>> Choline_kinase  Choline/ethanolamine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   2.4e-05     0.053     140     176 ..     131     167 ..      98     176 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 2.4e-05
                     CHGG-EEEE-S--SGGGEEE.-CTTEEEE--GTT-EE CS
  Choline_kinase 140 elespvvfcHnDlqegNillnkeekklvlIDFEYagy 176
                     ++ ++v   H Dl ++Nil+++e ++++l DF  a+ 
      EPX72215.1 131 QHCHSVGIYHRDLKPENILVDNEGRTVYLADFGLATT 167
                     34445777799*********************77765 PP

>> Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.0   0.00019      0.42     260     315 ..     102     153 ..      82     161 .. 0.70

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00019
  Pox_ser-thr_kin 260 vkeeiaaelGfaslveyikfifLqiaLLyikiyelpdcenflhvDlkPdniLifds 315
                      + + i+++  +  + + ik++f q+    i   +        h DlkP+niL+ ++
       EPX72215.1 102 LFTCITEKNLYRGNDSLIKHVFSQL----ISAVQHCHSVGIYHRDLKPENILVDNE 153
                      5555666666889999999999974....3333443445678**********9665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (471 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       426  (0.0237604); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.58u 0.28s 00:00:00.86 Elapsed: 00:00:00.46
# Mc/sec: 3076.39
//
Query:       EPX72216.1  [L=351]
Description: ubiquitin carboxy terminal hydrolase Ubp11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-31  109.4   3.7    3.3e-31  108.7   3.7    1.4  1  UCH       Ubiquitin carboxyl-terminal hydrolase


Domain annotation for each model (and alignments):
>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.7   3.7   1.8e-35   3.3e-31       2     257 .]      51     342 ..      50     342 .. 0.84

  Alignments for each domain:
  == domain 1  score: 108.7 bits;  conditional E-value: 1.8e-35
                 EES-.SSSTHHHHHHHHHHHTSHHHHHHHHTCHHCCSSTCCCCC-.TT.TTS.TTHHHHHHHHHHHHHHSH-CCEE--HHHHHHHHHHSGG.GTSSSTC CS
                 xxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxx RF
         UCH   2 GlsN.lGntCymnsvlQcLfsipelrdyllsleevkkesrnkkelnesnplgkkgelakalkdlfkellkskskavsPkklkktlsklaks.fsgykqq 98 
                 Gl N  Gn C++nsvlQ+L+s  +l+++l+         r +++            l+ al d++k+l+  +sk +s + +++ l+++ ++ +  + qq
  EPX72216.1  51 GLYNsSGNDCFLNSVLQALASQSSLTEFLQL--------RASSS-----------TLYAALLDFLKSLNSGSSKPISANYFLNLLERITNKvILRSLQQ 130
                 6666259********************9999........22222...........39************889****************9997779**** PP

                 EHHHHHHHHHHHHHHHHCC................................HCCCHHHHHHCCCTTSHHHHHH-EEEEE.................... CS
                 xxxxxxxxxxxxxxxxxxx................................xxxxxxxxxxxxxxxxxxxxxxxxxxxx.................... RF
         UCH  99 DaqEflaflLdqlhedlnr................................evaeekwkkhlkrndslitdlfegqlks.................... 145
                 Da+Efl++lL+ ++++  +                                +           +++s++ ++   ql+                     
  EPX72216.1 131 DAHEFLQYLLEIIESQNLSlpsppssvrilgfpaqlpfigiilqtvqcsscS-----------AKTSTVFKNTTLQLSFpyahnassitlsqlfasngf 218
                 **************998889*************9999988776544443330...........333333333333333366666667777778888888 PP

                 .......................EEEEEEB-SEEEEEEESEEETEE.EEE--SEEB--SEEE-GGGBSS-BTTS-TCS-BEEEEEEEEEESCTTSEEEE CS
                 .......................xxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH 146 .......................klklkrlPeiLiihlkRfsynss.ksKlntkvefpeeldlssylaeekkkkteekkkYeLiavvvHsGslssGHYv 220
                                         ++ kr P+ L+i+l+R  y+s   s++nt v ++++  l++            + +Y+L +++ H+G+++sGHY+
  EPX72216.1 219 eqiddykcdtcyphtkkttscfrFVQWKRPPTLLQIQLERSCYTSLgLSRNNTAVRYEKSFLLQN------------RYRYHLRSLITHHGGANSGHYI 305
                 8999******************99999****************9999***********6666653............334******************* PP

                 EEEECTTTTEEEEEETTEEEEE-HHCCCTT...CEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxx RF
         UCH 221 ayiknekngkWykydDetvkevkeeeevls...sayiLfY 257
                 +y+k  k+++W+  +D+ +++++ e +vl    ++++LfY
  EPX72216.1 306 CYRK--KDNSWWSANDTIISKCSIE-KVLDqhrQVFMLFY 342
                 ****..8999*************88.677679******** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (351 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       680  (0.0379274); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2575.91
//
Query:       EPX72217.1  [L=65]
Description: DNA-directed RNA polymerase I [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.7e-17   60.5   5.5    1.1e-16   60.2   5.5    1.1  1  DNA_RNApol_7kD   DNA directed RNA polymerase, 7 kDa subunit
      0.002   17.9   1.5        1.4    8.8   0.2    2.2  2  TFIIS_C          Transcription factor S-II (TFIIS)
     0.0037   17.9   1.4      0.021   15.5   0.2    2.0  2  zf-ISL3          zinc-finger of transposase IS204/IS1001/IS10
     0.0061   16.6   0.5     0.0083   16.1   0.5    1.3  1  DZR              Double zinc ribbon
     0.0086   15.9   0.4       0.01   15.7   0.4    1.1  1  NinF             NinF protein
  ------ inclusion threshold ------
      0.011   15.8   0.2      0.011   15.7   0.2    1.1  1  HypA             Hydrogenase/urease nickel incorporation, met
      0.014   15.1   0.9      0.034   13.9   0.9    1.7  1  zinc_ribbon_2    zinc-ribbon domain
      0.017   14.8   0.2       0.36   10.6   0.0    2.1  2  zinc_ribbon_10   Predicted integral membrane zinc-ribbon meta
       0.02   15.6   0.5      0.025   15.3   0.5    1.2  1  zinc-ribbon_6    zinc-ribbon domain
      0.022   14.9   0.3      0.026   14.7   0.3    1.1  1  DUF2318          Predicted membrane protein (DUF2318)
      0.024   14.8   2.2      0.056   13.6   2.2    1.7  2  Zn-ribbon_8      Zinc ribbon domain
      0.024   14.7   0.1      0.025   14.6   0.1    1.1  1  zf-C3HC          C3HC zinc finger-like
      0.026   14.4   1.3      0.037   14.0   1.3    1.2  1  OrfB_Zn_ribbon   Putative transposase DNA-binding domain
      0.027   14.2   0.7      0.038   13.7   0.7    1.2  1  Ribosomal_S27e   Ribosomal protein S27
      0.094   12.7   1.4        0.3   11.1   1.6    1.7  2  zinc_ribbon_6    Zinc-ribbon
       0.13   12.0   1.9         10    6.0   0.2    2.2  2  zf-C2H2_11       zinc-finger C2H2-type
        0.2   11.5   5.8        0.8    9.7   0.1    2.8  2  DUF35_N          Rubredoxin-like zinc ribbon domain (DUF35_N)
       0.21   11.2   1.1        7.6    6.2   0.1    2.1  2  zf_UBZ           Ubiquitin-Binding Zinc Finger
       0.23   11.2   3.9        6.5    6.6   0.8    2.2  2  Rubredoxin_2     Rubredoxin metal binding domain
       0.28   11.7   7.5        1.4    9.5   2.2    2.1  2  Zn_ribbon_recom  Recombinase zinc beta ribbon domain
        0.3   11.0   3.8        2.3    8.2   0.1    2.1  2  zf-trcl          Probable zinc-ribbon domain
        0.3   11.1   3.3       0.38   10.8   0.5    1.9  3  Zn_Tnp_IS1595    Transposase zinc-ribbon domain
       0.58   10.4   3.6        3.3    8.0   1.0    2.0  2  Cas_CXXC_CXXC    CRISPR-associated protein (Cas_CXXC_CXXC)


Domain annotation for each model (and alignments):
>> DNA_RNApol_7kD  DNA directed RNA polymerase, 7 kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.2   5.5   1.4e-19   1.1e-16       1      32 []      24      55 ..      24      55 .. 0.99

  Alignments for each domain:
  == domain 1  score: 60.2 bits;  conditional E-value: 1.4e-19
                    -B-SSS--B----SSS----SSS-----B--- CS
  DNA_RNApol_7kD  1 YiCgeCgaevslkkgdpiRCkeCGhRilYKkR 32
                    Y C++Cga+++++++++iRC+eCGhR++YK+R
      EPX72217.1 24 YLCADCGAKNTIQAKEVIRCRECGHRVMYKMR 55
                    9*****************************99 PP

>> TFIIS_C  Transcription factor S-II (TFIIS)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   0.1    0.0023       1.8      24      37 ..      19      32 ..      18      34 .. 0.88
   2 !    8.8   0.2    0.0018       1.4       2      14 ..      42      54 ..      41      59 .. 0.77

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0023
     TFIIS_C 24 pmtvfykCtkCghr 37
                p t++y C++Cg +
  EPX72217.1 19 PVTMIYLCADCGAK 32
                789********975 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.0018
     TFIIS_C  2 kCpkCgsreayff 14
                +C +Cg+r +y +
  EPX72217.1 42 RCRECGHRVMYKM 54
                7899999888865 PP

>> zf-ISL3  zinc-finger of transposase IS204/IS1001/IS1096/IS1165
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.1      0.55   4.3e+02       5      12 ..      26      33 ..      24      38 .. 0.75
   2 !   15.5   0.2   2.7e-05     0.021       2      25 ..      40      62 ..      39      64 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.55
     zf-ISL3  5 CPnCgskt 12
                C  Cg+k+
  EPX72217.1 26 CADCGAKN 33
                88899885 PP

  == domain 2  score: 15.5 bits;  conditional E-value: 2.7e-05
     zf-ISL3  2 phrCPnCgsktvvkhgkkerrvrh 25
                ++rC++Cg ++++k+ + +r v++
  EPX72217.1 40 VIRCRECGHRVMYKMRT-KRMVQF 62
                68*************75.888877 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.5   1.1e-05    0.0083      15      38 ..      26      50 ..      15      57 .. 0.64

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.1e-05
         DZR 15 CseCgtk.lkavaaedrCpsCgekv 38
                C +Cg+k   ++++ +rC +Cg+ v
  EPX72217.1 26 CADCGAKnTIQAKEVIRCRECGHRV 50
                6667766322233366777776665 PP

>> NinF  NinF protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.4   1.3e-05      0.01      19      45 ..      25      53 ..      20      63 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1.3e-05
        NinF 19 LCanCskk..LevdevhvCeeCvaeliyy 45
                LCa+C+ k  ++  ev  C eC  +++y 
  EPX72217.1 25 LCADCGAKntIQAKEVIRCRECGHRVMYK 53
                8*****87447899*************64 PP

>> HypA  Hydrogenase/urease nickel incorporation, metallochaperone, hypA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.7   0.2   1.4e-05     0.011      68      97 ..      21      51 ..      11      63 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1.4e-05
                --EEEETTTS-EEECHHH.HHS-TTTSSS-E CS
        HypA 68 pvkvrCreCgkefeleek.alrCpkCgsadv 97
                 + + C +Cg++ ++++k  +rC +Cg++ +
  EPX72217.1 21 TMIYLCADCGAKNTIQAKeVIRCRECGHRVM 51
                56789******9998876588******9755 PP

>> zinc_ribbon_2  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.9   4.4e-05     0.034       2      22 ..      26      49 ..      25      50 .. 0.92

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 4.4e-05
  zinc_ribbon_2  2 CpnCGaelqdnakF...CpyCGtp 22
                   C  CGa++   ak    C +CG+ 
     EPX72217.1 26 CADCGAKNTIQAKEvirCRECGHR 49
                   99******99999999******96 PP

>> zinc_ribbon_10  Predicted integral membrane zinc-ribbon metal-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00046      0.36      37      54 .]      16      33 ..       8      33 .. 0.81
   2 ?    2.8   0.1      0.12        95      46      52 ..      42      48 ..      36      62 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00046
  zinc_ribbon_10 37 keeleevkyrCpkCgaln 54
                    + ++ ++ y C+ Cga+n
      EPX72217.1 16 PPRPVTMIYLCADCGAKN 33
                    5567889*********98 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.12
  zinc_ribbon_10 46 rCpkCga 52
                    rC +Cg+
      EPX72217.1 42 RCRECGH 48
                    6888887 PP

>> zinc-ribbon_6  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.3   0.5   3.2e-05     0.025       2      38 ..      24      63 ..      23      65 .] 0.78

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 3.2e-05
  zinc-ribbon_6  2 feCeqCgqllff...enssClkCgaalgfapeelellale 38
                   + C+ Cg +      e  +C +Cg+++ ++ ++++++ +e
     EPX72217.1 24 YLCADCGAKNTIqakEVIRCRECGHRVMYKMRTKRMVQFE 63
                   8899998765551114568*****************9887 PP

>> DUF2318  Predicted membrane protein (DUF2318)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.3   3.3e-05     0.026      32      63 ..      21      52 ..      14      60 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 3.3e-05
     DUF2318 32 valdaCevCekkgYvqegeelvCknCgvrfal 63
                + +  C  C+ k  +q +e + C++Cg r+  
  EPX72217.1 21 TMIYLCADCGAKNTIQAKEVIRCRECGHRVMY 52
                56778**********************98764 PP

>> Zn-ribbon_8  Zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   2.2   7.1e-05     0.056       6      36 ..      24      50 ..      21      54 .. 0.75
   2 ?    7.5   0.3    0.0058       4.5       7      15 ..      42      50 ..      40      58 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 7.1e-05
  Zn-ribbon_8  6 YrCeeCghefevlqsisdapltaCPeCgsev 36
                 Y C +Cg   + +q+ +  + + C eCg++v
   EPX72217.1 24 YLCADCG-AKNTIQA-K--EVIRCRECGHRV 50
                 99*****.5555773.3..3666*****965 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0058
  Zn-ribbon_8  7 rCeeCghef 15
                 rC+eCgh+ 
   EPX72217.1 42 RCRECGHRV 50
                 899999975 PP

>> zf-C3HC  C3HC zinc finger-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.1   3.2e-05     0.025      30      58 ..      25      55 ..      17      65 .] 0.81

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 3.2e-05
     zf-C3HC 30 kcAkrGWkc..vskdrlkCevCgaslvlklk 58
                 cA+ G k+  ++k+ ++C +Cg+++++k+ 
  EPX72217.1 25 LCADCGAKNtiQAKEVIRCRECGHRVMYKMR 55
                5999999997778***************953 PP

>> OrfB_Zn_ribbon  Putative transposase DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   1.3   4.7e-05     0.037      31      55 ..      26      49 ..      24      53 .. 0.94

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 4.7e-05
  OrfB_Zn_ribbon 31 CseCgsknkealsgrtfkCpnCgfe 55
                    C+ Cg+kn+  +++++ +C++Cg++
      EPX72217.1 26 CADCGAKNTI-QAKEVIRCRECGHR 49
                    **********.************96 PP

>> Ribosomal_S27e  Ribosomal protein S27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.7   4.8e-05     0.038      10      36 ..      26      50 ..      19      54 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 4.8e-05
                    -TTTS-EEEEESS-SS-EEESSSTCEE CS
  Ribosomal_S27e 10 CpdCenetvvFshaatvvkCisCgkvL 36
                    C dC+++ ++  +a+ v+ C  Cg+ +
      EPX72217.1 26 CADCGAKNTI--QAKEVIRCRECGHRV 50
                    *********9..89**********865 PP

>> zinc_ribbon_6  Zinc-ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   1.6   0.00039       0.3      29      54 ..      23      47 ..      14      48 .. 0.83
   2 ?    4.8   0.1     0.038        29      26      43 ..      37      54 ..      33      58 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00039
  zinc_ribbon_6 29 kilCnDCekksevkfhvlglkCkeCg 54
                     lC DC++k +++ + + ++C+eCg
     EPX72217.1 23 IYLCADCGAKNTIQAKEV-IRCRECG 47
                   558***********9987.7999996 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.038
  zinc_ribbon_6 26 kkvkilCnDCekksevkf 43
                   +k  i C+ C+++   k+
     EPX72217.1 37 AKEVIRCRECGHRVMYKM 54
                   677899****99877665 PP

>> zf-C2H2_11  zinc-finger C2H2-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.1     0.017        13       7      17 ..      26      36 ..      24      37 .. 0.89
   2 ?    6.0   0.2     0.013        10       6      11 ..      42      47 ..      39      49 .. 0.87

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.017
  zf-C2H2_11  7 CleCGlcftSq 17
                C +CG + t+q
  EPX72217.1 26 CADCGAKNTIQ 36
                *******9988 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.013
  zf-C2H2_11  6 qCleCG 11
                +C+eCG
  EPX72217.1 42 RCRECG 47
                9****9 PP

>> DUF35_N  Rubredoxin-like zinc ribbon domain (DUF35_N)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   1.9      0.18   1.4e+02      10      19 ..      22      31 ..      17      31 .. 0.77
   2 ?    9.7   0.1     0.001       0.8      13      24 ..      42      53 ..      39      56 .. 0.83

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.18
     DUF35_N 10 vgqrCpdCGt 19
                ++  C+dCG+
  EPX72217.1 22 MIYLCADCGA 31
                56679***96 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.001
     DUF35_N 13 rCpdCGtvqfPP 24
                rC+ CG+ + ++
  EPX72217.1 42 RCRECGHRVMYK 53
                9******99887 PP

>> zf_UBZ  Ubiquitin-Binding Zinc Finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.1    0.0097       7.6       3      11 ..      24      32 ..      23      38 .. 0.89
   2 ?    4.1   0.1     0.046        36       4      12 ..      42      50 ..      39      52 .. 0.85

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0097
      zf_UBZ  3 ylCerCgke 11
                ylC++Cg++
  EPX72217.1 24 YLCADCGAK 32
                99****975 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.046
      zf_UBZ  4 lCerCgkei 12
                 C +Cg+++
  EPX72217.1 42 RCRECGHRV 50
                7*****986 PP

>> Rubredoxin_2  Rubredoxin metal binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.1     0.017        13       1       9 [.      24      32 ..      24      36 .. 0.77
   2 ?    6.6   0.8    0.0083       6.5       2       9 ..      42      49 ..      42      50 .. 0.82

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.017
  Rubredoxin_2  1 YvCsqCGfe 9 
                  Y C +CG++
    EPX72217.1 24 YLCADCGAK 32
                  779999875 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0083
  Rubredoxin_2  2 vCsqCGfe 9 
                  +C++CG++
    EPX72217.1 42 RCRECGHR 49
                  79999985 PP

>> Zn_ribbon_recom  Recombinase zinc beta ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.2     0.027        21       7      16 ..      25      34 ..      21      39 .. 0.78
   2 ?    9.5   2.2    0.0018       1.4       5      22 ..      40      57 ..      38      62 .. 0.79

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.027
  Zn_ribbon_recom  7 rCgeCGspmt 16
                      C++CG++ t
       EPX72217.1 25 LCADCGAKNT 34
                     7*****9855 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.0018
  Zn_ribbon_recom  5 llrCgeCGspmtrrkrkg 22
                     ++rC eCG++  ++ r++
       EPX72217.1 40 VIRCRECGHRVMYKMRTK 57
                     69********88766554 PP

>> zf-trcl  Probable zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.1     0.003       2.3       5      20 ..      24      39 ..      22      41 .. 0.85
   2 ?    4.9   0.5     0.031        24       4      12 ..      40      48 ..      37      55 .. 0.66

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.003
     zf-trcl  5 ltCkdCgaefvFtage 20
                + C+dCga+ +  a+e
  EPX72217.1 24 YLCADCGAKNTIQAKE 39
                68******99988876 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.031
     zf-trcl  4 tltCkdCga 12
                ++ C++Cg 
  EPX72217.1 40 VIRCRECGH 48
                456777765 PP

>> Zn_Tnp_IS1595  Transposase zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.1      0.56   4.4e+02      38      45 ..      24      31 ..      18      32 .. 0.80
   2 ?    5.7   3.9     0.019        15      21      45 ..      26      48 ..      24      49 .. 0.77
   3 ?   10.8   0.5   0.00049      0.38      19      35 ..      41      57 ..      32      63 .. 0.82

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.56
  Zn_Tnp_IS1595 38 fqCkeCrk 45
                   + C++C++
     EPX72217.1 24 YLCADCGA 31
                   77999975 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.019
  Zn_Tnp_IS1595 21 CPhCgsrkayriktrglfqCkeCrk 45
                   C  Cg     +i++ ++ +C+eC++
     EPX72217.1 26 CADCG--AKNTIQAKEVIRCRECGH 48
                   88999..555566666*******98 PP

  == domain 3  score: 10.8 bits;  conditional E-value: 0.00049
  Zn_Tnp_IS1595 19 fvCPhCgsrkayriktr 35
                    +C  Cg+r  y+++t 
     EPX72217.1 41 IRCRECGHRVMYKMRTK 57
                   57************993 PP

>> Cas_CXXC_CXXC  CRISPR-associated protein (Cas_CXXC_CXXC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.1     0.067        52       6      21 ..      24      39 ..      20      42 .. 0.82
   2 ?    8.0   1.0    0.0042       3.3       7      25 ..      42      60 ..      36      65 .] 0.80

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.067
  Cas_CXXC_CXXC  6 gnCitCgeRnvkqlkg 21
                   ++C  Cg  n+ q k 
     EPX72217.1 24 YLCADCGAKNTIQAKE 39
                   89*****999988875 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0042
  Cas_CXXC_CXXC  7 nCitCgeRnvkqlkgklsv 25
                    C  Cg R ++++++k  v
     EPX72217.1 42 RCRECGHRVMYKMRTKRMV 60
                   79************97655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       550  (0.0306766); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        72  (0.00401584); expected 17.9 (0.001)
Passed Fwd filter:                        23  (0.00128284); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              23  [number of targets reported over threshold]
# CPU time: 0.34u 0.21s 00:00:00.55 Elapsed: 00:00:00.37
# Mc/sec: 531.05
//
Query:       EPX72218.1  [L=336]
Description: DNA methyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.9e-37  128.8   0.0    9.8e-37  127.0   0.0    1.7  1  DNA_methylase  C-5 cytosine-specific DNA methylase
  ------ inclusion threshold ------
       0.41   10.4   2.0        2.7    7.7   0.1    3.3  3  Sigma70_r4_2   Sigma-70, region 4


Domain annotation for each model (and alignments):
>> DNA_methylase  C-5 cytosine-specific DNA methylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.0   0.0   1.1e-40   9.8e-37       1     331 [.       8     323 ..       8     327 .. 0.81

  Alignments for each domain:
  == domain 1  score: 127.0 bits;  conditional E-value: 1.1e-40
                    -EEEEES-TT-HHHHHHHHTT..-EEEEEEE--TTTHHHHHHH-..-SEEEES-TTTS-GS--..-SEEEE---GGGTECTSEE--TTSGGGHHHH CS
  DNA_methylase   1 lkfidLfaGiGGfrlgleaag..fecvaaseidkkaaktYeanfk.kvsigDitkidkkklpe.diDlLvgGfPCqpfSvaGkqkgfedtrgtLff 92 
                    +++++L +GiGG++++l+a +  fe+v+a++i++ a  +Y  n + + ++ Ditk++  +l e ++Dl + ++ Cqp+   Gkq++ +d+r+  f 
     EPX72218.1   8 IRVLELYSGIGGMHYALKASNvpFEIVCAIDINPLANRVYYHNLEhRAKHIDITKLNAAELDEyQCDLWTMSPSCQPYTRIGKQQDVQDPRSHAFL 103
                    589*****************99**********************999***************999***************************9999 PP

                    HHHHHHHHH-..-SEEEEEEEGGGGGGCCSHHHHHHHHHHHHHTEEEEEEEEEGGGTT-SB--EEEEEEEEEGGG---.-------SS---GGG.. CS
  DNA_methylase  93 eiiriikekk..PkvfllENVkgLlkhdkgktlkvilekleelGYevsykllnasdyGvpQnReRvfivgirkdleln.vlvkvkefrfpkkkdle 185
                       + + +    P+++l+ENV+g  ++    t     e l+++GY +    l  +++++p +R R++ ++ +    +n     +    f++ ++ +
     EPX72218.1 104 HLLEELPKMMspPEYILIENVQGFESS---ITAHSCREVLKKMGYYIIEGNLTPKEFDIPNSRCRWYGLARKDA-SVNwSFDDIRTAPFEDSYK-N 194
                    888888776667************999...5577777888999*9999999999*************9997665.4554444555555555553.5 PP

                    ...TSGGGTTS-EEBTTTB--GGGSSSTT-EE--.......S---HHHTS--B--TTS...-B----S-STT--B-TTS---EEEETTEEE--T.T CS
  DNA_methylase 186 asktlrdlleekseldeektalsdklvekeekikkttkaseegypkelsrnridkveelkglsatrrksgrgeklekelaeagklqknkerfkpvi 281
                    +  +l d lee         +l+  +++++ +++   ++++++++      +++    ++g+ ++++ sg+      ++ + ++  ++ e+     
     EPX72218.1 195 QELRLIDFLEE-------GVNLESYFLPEKLMFR--YGHQLDIVK----PTSTNCCCFTRGYAQLIQGSGS----VLQTSDHENIAEQFEK---DR 270
                    55667777776.......7888888888888887..455666666....3335688899999999999997....3334444444444443...34 PP

                    TGGG--B-BHHHHHHHHT--TT-----SBH...HHHHHHHTS--HHHHHHHHH CS
  DNA_methylase 282 ekkriRrLtprEaarlqGfPddfefgskks...aaykqiGnsVpvpvieaiak 331
                       r R +t rE ar++GfPd+f+ ++      ++y+++Gns++v+v+ +++ 
     EPX72218.1 271 MSLRLRYFTAREIARIMGFPDSFQWKELGIsekTMYRLLGNSINVNVVSRLLT 323
                    5789******************98665443345***************99876 PP

>> Sigma70_r4_2  Sigma-70, region 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.31   2.8e+03       3      13 ..     101     111 ..      99     111 .. 0.83
   2 ?    7.7   0.1    0.0003       2.7      13      46 ..     267     308 ..     252     311 .. 0.82
   3 ?   -2.9   0.0      0.65   5.8e+03       4      17 ..     322     335 ..     320     335 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.31
                   HHHHHHTTS-H CS
  Sigma70_r4_2   3 alrealaeLpe 13 
                   a++++l+eLp+
    EPX72218.1 101 AFLHLLEELPK 111
                   78999****95 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.0003
                   HHHHHHHHHHHTS---HHHHHHHH...........T--HHHHHHH CS
  Sigma70_r4_2  13 erqreifllryleglsykEIAell...........gisegtVksr 46 
                   e++r+ + lry   ++ +EIA+++           gise+t+++ 
    EPX72218.1 267 EKDRMSLRLRY---FTAREIARIMgfpdsfqwkelGISEKTMYRL 308
                   56777777777...89999*****888888888888888887765 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 0.65
                   HHHHHTTS-HHHHH CS
  Sigma70_r4_2   4 lrealaeLperqre 17 
                   l  +l+ L+ rq++
    EPX72218.1 322 LTYLLNNLTSRQKK 335
                   56789999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (336 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       557  (0.031067); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2478.62
//
Query:       EPX72219.1  [L=1066]
Description: ATP-dependent RNA helicase Cdc28 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.8e-21   74.6   0.1    1.4e-20   73.4   0.1    1.7  1  OB_NTP_bind  Oligonucleotide/oligosaccharide-binding (OB)-fol
      1e-19   70.8   0.0      1e-19   70.8   0.0    3.4  3  HA2          Helicase associated domain (HA2)
    2.2e-17   63.4   0.0    1.1e-16   61.2   0.0    2.3  1  Helicase_C   Helicase conserved C-terminal domain
    2.2e-08   34.0   0.2    9.7e-08   32.0   0.0    2.1  3  DEAD         DEAD/DEAH box helicase
      9e-06   26.0   1.3     0.0002   21.6   0.0    2.9  3  AAA_22       AAA domain
    0.00023   21.5   0.1    0.00092   19.6   0.0    2.0  2  AAA_19       AAA domain
    0.00042   20.0   0.0     0.0049   16.5   0.0    2.5  2  SRP54        SRP54-type protein, GTPase domain
     0.0041   17.1   0.1     0.0088   16.0   0.1    1.4  1  Flavi_DEAD   Flavivirus DEAD domain
     0.0045   16.7   0.0     0.0088   15.8   0.0    1.4  1  AAA_30       AAA domain
  ------ inclusion threshold ------
      0.027   13.6   0.0      0.062   12.3   0.0    1.6  1  T2SSE        Type II/IV secretion system protein
        6.7    6.7   8.2        2.7    8.0   0.3    3.3  3  ResIII       Type III restriction enzyme, res subunit


Domain annotation for each model (and alignments):
>> OB_NTP_bind  Oligonucleotide/oligosaccharide-binding (OB)-fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.4   0.1   8.5e-24   1.4e-20       1      83 []     972    1050 ..     972    1050 .. 0.98

  Alignments for each domain:
  == domain 1  score: 73.4 bits;  conditional E-value: 8.5e-24
                   HHHHHHHHHTTCEEEEEETTCCEEETTTCEEEEE-TTSTTTTT...TSSSEEEEEEEEESSSEEEEEEEEE-HHHHHHHSTTT CS
  OB_NTP_bind    1 lraillaGlypqiarkdpskkdyktartktrvfihpsSvlaknekekepewvvytelvettklylrdltaidpawLllfagqi 83  
                   ++++++aG++++ ar d+++ +y+t++ ++ v++hpsS+l +    k+p+ ++y+elv t+k y+r+++ i+p+wLl++++++
   EPX72219.1  972 IQKAITAGYFSNAARLDRTGDSYRTVKSNQTVYVHPSSTLVE----KKPKIIIYYELVLTSKEYCRQVMQIQPEWLLEISPHY 1050
                   799***********************99*************7....*********************************9986 PP

>> HA2  Helicase associated domain (HA2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   3.4       2.2   3.6e+03      63      98 ..     100     135 ..      14     147 .. 0.69
   2 ?   -3.8   1.7       9.7   1.6e+04      58      63 ..     219     224 ..     170     266 .. 0.56
   3 !   70.8   0.0   6.3e-23     1e-19       1     108 []     824     913 ..     824     913 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 2.2
         HA2  63 ifleeneeekeeeeeeeekakkkrkeeekarrklah 98 
                 ++le++++e++++  +++ +k+k++++e+++  l++
  EPX72219.1 100 LLLEPQQAERSKSLPSSDSRKRKERRKEHKQDLLIR 135
                 444555555444444333333333333332333333 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 9.7
         HA2  58 lsveei 63 
                 ls +ei
  EPX72219.1 219 LSSDEI 224
                 333333 PP

  == domain 3  score: 70.8 bits;  conditional E-value: 6.3e-23
         HA2   1 AlelLvalgALdeegnlTelGrkmaelPlsprlakmLlaaaeleegcldevitivAalsv.eeifleeneeekeeeeeeeekakkkrkeeekarrklah 98 
                 +lelL+algAL+++g+lT+lGr+mae+P +p+l+k L+a+a +  gc++ev++i+A+l    ++f ++++                  e++k+r ++++
  EPX72219.1 824 SLELLYALGALNNRGELTKLGRQMAEFPTDPMLSKSLIASASY--GCVEEVLSIIAMLGEsASLFYRPKDRI---------------MEADKSRMNFVQ 905
                 689*************************************888..*************95488888888543...............444555666777 PP

         HA2  99 kdaegDhltl 108
                 ++  gDhltl
  EPX72219.1 906 PG--GDHLTL 913
                 77..888886 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.2   0.0   6.6e-20   1.1e-16       5     111 .]     630     762 ..     624     762 .. 0.87

  Alignments for each domain:
  == domain 1  score: 61.2 bits;  conditional E-value: 6.6e-20
                 HHHHHHHHTTTTSEEEEEESSHHHHHH........HHHHHHHT.TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSS CS
  Helicase_C   5 allellkleeeggkilifvntidrlek........vklllekk.gikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlp 94 
                 ++l++ +++++ g+il+f++ +d++e         +k+l ++  +i  ++++++lp++ + +i+e    g ++v++at++ae++i+i++vn+Vi+ ++ 
  EPX72219.1 630 TILQI-HTTQQAGDILVFLTGQDEIEVmseniqelCKILGKRIpEIILCPIYANLPSELQAKIFEPTPPGARKVVLATNIAETSITIDGVNYVIDSGFV 727
                 44444.6899*************7755555665566666544489****************************************************** PP

                 .SSH.................HHHHHHHTTSSSTT CS
  Helicase_C  95 .rnv.................tsyiqriGRtgRag 111
                  +nv                 +s+ qr+GR+gR+g
  EPX72219.1 728 kQNVynprtgmeslvsvpcsrASADQRAGRAGRVG 762
                 75557889999**********************97 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.0   0.0   5.9e-11   9.7e-08      10     170 ..     443     588 ..     434     593 .. 0.81
   2 ?   -3.4   0.0       4.5   7.3e+03      78     105 ..     937     964 ..     928     982 .. 0.76
   3 ?   -2.5   0.0       2.4   3.9e+03      43      62 ..     995    1014 ..     969    1017 .. 0.79

  Alignments for each domain:
  == domain 1  score: 32.0 bits;  conditional E-value: 5.9e-11
                 HHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCSEEEEEHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  10 lilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvdivvgtpgrl 108
                 +i   + +lv aeTGsGKT+     + ++ y   +k+++k+ +  P r  a  ++ ++ + ++   +r+   +g  + r + ++  +++ i + t g+l
  EPX72219.1 443 AIEAYQVLLVVAETGSGKTTQLPQFLHDAGY---TKNNKKICCTQPRRVAAMSVAARVANEMD---VRLGQEVG-YTIRFENNTS-EKTVIKYLTDGML 533
                 555556789***********98888887777...59999*******************99988...45554444.4555555555.668899******* PP

                 HH.HHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBS CS
                 xx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 109 dd.llstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlp 170
                 ++ +l++    l + +++++DEa++       d +  +++ +++   d k    v+v SAT+ 
  EPX72219.1 534 LReFLNEPD--LASYSVIIIDEAHERTLH--TDILFGLVKDIARFRPDLK----VLVSSATID 588
                 *95556555..*************98876..999999*****98888877....*******97 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 4.5
                 EEEEETTSSHHHHHHHHHTTCSEEEEEH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  78 vlliiggvaardqlskldngvdivvgtp 105
                 ++++    + rdql++l n+v+i ++t 
  EPX72219.1 937 YKSLCRARDVRDQLANLCNRVEIELTTN 964
                 4555667788999999988899988886 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 2.4
                  TTSTS-EEEEEESSHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxx RF
        DEAD   43 kgktgpkalivePtreLaeq 62  
                  ++ + +++++v P+  L+e+
  EPX72219.1  995 RTVKSNQTVYVHPSSTLVEK 1014
                  56677899*******99985 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0      0.13   2.2e+02      35      71 ..      12      66 ..       1      97 [. 0.63
   2 ?   -3.5   0.1         7   1.1e+04      75      89 ..     236     250 ..     204     273 .. 0.49
   3 !   21.6   0.0   1.3e-07    0.0002       6     102 ..     448     556 ..     444     585 .. 0.76

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.13
      AAA_22 35 aee...erpevv...fvtlpsstsskdllrellralglelka............e 71
                ++     +p+vv     +++ss ss++l+++l+ +  +e+++             
  EPX72219.1 12 IALlgmSEPSVVeyiIAEASSSRSSQELFQKLVGFGMEEHNTkvhefahslysrI 66
                33355655666653266666666*********99988888885555555555443 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 7
      AAA_22  75 seellealeqalrar 89 
                 +e l + l++ +r++
  EPX72219.1 236 REKLAAELRKKSRRH 250
                 333333333332222 PP

  == domain 3  score: 21.6 bits;  conditional E-value: 1.3e-07
      AAA_22   6 gilvvtGesGtGKTtllrrlleqldeeakaee.erpevvfvtlpsst..sskdllrellralglelka.........erlsseellealeqalrarav. 91 
                 ++l+v++e+G+GKTt l ++l+ +       + ++ +  +++++++      +++ +++++++++l           ++ s++ ++++l++ +  r   
  EPX72219.1 448 QVLLVVAETGSGKTTQLPQFLHDAG------YtKNNK--KICCTQPRrvAAMSVAARVANEMDVRLGQevgytirfeNNTSEKTVIKYLTDGMLLREFl 538
                 689*******************984......123444..5555555555999999********999999999***975555555557777776666666 PP

      AAA_22  92 .......ielliiDEaqh 102
                         +++iiDEa+ 
  EPX72219.1 539 nepdlasYSVIIIDEAHE 556
                 777789889********8 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0         4   6.5e+03      43      78 ..      24      89 ..      10     153 .. 0.67
   2 !   19.6   0.0   5.6e-07   0.00092      10     115 ..     447     558 ..     441     575 .. 0.64

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 4
      AAA_19 43 eeillvaftgrAakelrerlaalgae..atTiHrlal............................l 78
                e i++ a  +r+ +el ++l ++g+e   t +H++a                             l
  EPX72219.1 24 EYIIAEASSSRSSQELFQKLVGFGMEehNTKVHEFAHslysripknkgklsdetysyrkkrqreiL 89
                667777888888888888887766665456677777766666666666666655555444444442 PP

  == domain 2  score: 19.6 bits;  conditional E-value: 5.6e-07
      AAA_19  10 ekvllvtaGpGtGKTrvlkhivallvelggvkp......eeillvaftgrAakelrerlaalgae.atTiHrlalldfddlltealelle......eae 95 
                  +vllv+a  G+GKT+ l + ++ +  +++ k       +++++++++ r a+e+  rl   g+e  +Ti  +   ++++ +++  ++l       e  
  EPX72219.1 447 YQVLLVVAETGSGKTTQLPQFLHDAGYTKNNKKicctqpRRVAAMSVAARVANEMDVRL---GQEvGYTIR-F---ENNTSEKTVIKYLTdgmllrEFL 538
                 4799**************99999888877664444555577777777777777777777...555645554.2...22222222333333333333445 PP

      AAA_19  96 eekklqeeellivDEfqdvd 115
                 +e +l +  ++i+DE+ + +
  EPX72219.1 539 NEPDLASYSVIIIDEAHERT 558
                 568885555******97654 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.43     7e+02     118     182 ..     365     431 ..     349     439 .. 0.69
   2 !   16.5   0.0     3e-06    0.0049       2     130 ..     448     592 ..     447     600 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.43
                 EEEEETTBHTHHHH..HHHHHHHHSSCSEEEEESTTSSSSTTHHHHHHHHHTS-EEEEE-SSSTTGE CS
       SRP54 118 llvldattgqeavk..qakaFkeavgitgviltklDgdakgGaalsiaaelklPikfigvGekiedl 182
                  lv + +++  + +    + F+++ +i+ +  + + g+++ Ga  s+ a ++  ik i++ e+ + l
  EPX72219.1 365 ALVYEDNMKAPTQEkqFDYVFDDSQKIDFLLESNMPGKSEPGAEASAPALSQAEIKAISMEESRKSL 431
                 4554444443332211235688888888888889999999999999999999999999888876655 PP

  == domain 2  score: 16.5 bits;  conditional E-value: 3e-06
                 EEEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEEESTSSTTHHHHHHHHHHHTTEEEEE..........SSTTSCHHHHHHHHH......HHHHHTTS CS
       SRP54   2 nvillvGlqGaGKTttlaKLaallkkegkkvllvaaDtfRaaAveQLktlaeklgvpvik..........kkeeadpaavakeav......ekakeeki 84 
                 +v+l+v  +G+GKTt l +  +     +++  ++++   R+aA+   + +a++++v++ +          +++e+  ++++ +++      ++ +  ++
  EPX72219.1 448 QVLLVVAETGSGKTTQLPQFLHDAGYTKNNKKICCTQPRRVAAMSVAARVANEMDVRLGQevgytirfenNTSEKTVIKYLTDGMllreflNEPDLASY 546
                 589999****************99999999999***********************9877777888776444455666666665422211155556679 PP

                 SEEEEEE--SSTTHHHHHHHHHHHHHHHSSSEEEEEEETTBHTHHH CS
       SRP54  85 dvvlvDTaGrlqndkelmeelkkikkvvkpdevllvldattgqeav 130
                  v+++D a     +++++  l k     +pd ++lv +at+  +++
  EPX72219.1 547 SVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLVSSATIDAAKF 592
                 9*******999999999999988888889**********9987665 PP

>> Flavi_DEAD  Flavivirus DEAD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.1   5.4e-06    0.0088       9     105 ..     452     555 ..     445     562 .. 0.77

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 5.4e-06
                 EE--TTS-TTTTHHHHHHHHH..HHTT--EEEEESSHHHHHHHHH.HTTTS-EEE----.....---------SEEEEEHHHHHHHHHHT------SEE CS
  Flavi_DEAD   9 ldlhPGaGktrkvlpelvkea..ierrlrtlvLaPtrvvlaemee.alkglevryktsa.....vkeektgrelvdvmchatftkrllspvrkknyeli 99 
                 + +  G+Gkt + lp+++++a  ++++++     P rv +  ++    ++++vr  +++     ++++++++ ++  +    + +  l++     y +i
  EPX72219.1 452 VVAETGSGKTTQ-LPQFLHDAgyTKNNKKICCTQPRRVAAMSVAArVANEMDVRLGQEVgytirFENNTSEKTVIKYLTDGMLLREFLNEPDLASYSVI 549
                 56678*****86.89998877423445555667799998877765145678888866542222267889999*************************** PP

                 EEETTT CS
  Flavi_DEAD 100 imDeah 105
                 i+Deah
  EPX72219.1 550 IIDEAH 555
                 ****** PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   5.4e-06    0.0088      18      97 ..     447     554 ..     439     573 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 5.4e-06
      AAA_30  18 drvavltGpAGtGKttalkal..reaweaag........grviglAptgkaAkvLaeelgieastiakllkrlk..................grarlep 88 
                  +v ++++  G+GKtt l +    + +++++        +rv++++  +++A+++   lg e   + ++ +++                   ++ +l++
  EPX72219.1 447 YQVLLVVAETGSGKTTQLPQFlhDAGYTKNNkkicctqpRRVAAMSVAARVANEMDVRLGQEVGYTIRFENNTSektvikyltdgmllreflNEPDLAS 545
                 46899*************988655666666579999999999999999999999997666544433344433334455555677889999996678999 PP

      AAA_30  89 gtllivDEa 97 
                  +++i+DEa
  EPX72219.1 546 YSVIIIDEA 554
                 9*******9 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   3.8e-05     0.062     105     153 ..     419     471 ..     397     484 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 3.8e-05
       T2SSE 105 lddlgaeealk....ekiaevlrkavrerglilvsGgTgsGKttllyallkei 153
                 ++ +++ee+ k     ++++ l ka+++++++lv   TgsGKtt l   l+  
  EPX72219.1 419 IKAISMEESRKslpvYAFKDDLLKAIEAYQVLLVVAETGSGKTTQLPQFLHDA 471
                 55555555555555556777788999*******************98887755 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.3       4.2   6.8e+03      96     129 ..      85     126 ..      55     137 .. 0.47
   2 ?   -1.7   0.1       1.6   2.6e+03      93     126 ..     256     292 ..     221     319 .. 0.67
   3 ?    8.0   0.3    0.0016       2.7      28     144 ..     451     557 ..     416     588 .. 0.57

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 4.2
                 -...........-SEEEEEHHHHHHTH............HHH CS
      ResIII  96 a....kekdstnkkilvttiqsldadseee....eeeseell 129
                 +    ++++++ k  l+ + q++ ++++      ++ +e+ +
  EPX72219.1  85 QreilQMENQNAKYELLLEPQQAERSKSLPssdsRKRKERRK 126
                 233333344444444444555555544343455433333333 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.6
                 -B--..........-SEEEEEHHHHHHTH........ CS
      ResIII  93 kkka...kekdstnkkilvttiqsldadseeeeeese 126
                  +++    ++++++ ++l++ +q  +++++e e+++e
  EPX72219.1 256 AQQQlelLRREIKDEELLFSDEQLTKREIHELEKKKE 292
                 3333555667778888888888888777744433333 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.0016
                 EEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSH....HHHHHHHHHGGGGTGG....GEEEESSS-B--.......-SEEEEEHHHHHHTH.... CS
      ResIII  28 likmaTGtGKTlvaaklierllkkgkeekflflvprk....slleqtleefkkflseaykeigkkvsgdkkkakekdstnkkilvttiqsldadseeee 122
                 l++++TG+GKT  + ++       ++++k+    pr+    s+  +  +e+   l ++   +g  ++ +++++     +++ i   t  +l       +
  EPX72219.1 451 LVVAETGSGKTTQLPQFLHDAGYTKNNKKICCTQPRRvaamSVAARVANEMDVRLGQE---VGYTIRFENNTS-----EKTVIKYLTDGMLL------R 535
                 5666666666666644444444444444555555555222233333333333333332...222222222222.....22222222333333......4 PP

                 ....HHHTTT-SEEEEETGGGT CS
      ResIII 123 eeseellrdrfdviiiDEaHrl 144
                 e  +e +  ++ viiiDEaH  
  EPX72219.1 536 EFLNEPDLASYSVIIIDEAHER 557
                 4478888888889999999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1066 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1491  (0.0831614); expected 358.6 (0.02)
Passed bias filter:                      592  (0.0330191); expected 358.6 (0.02)
Passed Vit filter:                        69  (0.00384851); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.90u 0.32s 00:00:01.22 Elapsed: 00:00:00.52
# Mc/sec: 6198.96
//
Query:       EPX72220.1  [L=142]
Description: hypothetical protein SOCG_04912 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00027   21.4   0.1        0.4   11.1   0.0    2.1  2  NuiA      Nuclease A inhibitor-like protein


Domain annotation for each model (and alignments):
>> NuiA  Nuclease A inhibitor-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   0.0   2.2e-05       0.4       5      33 ..      46      74 ..      42      99 .. 0.83
   2 !   10.4   0.0   3.7e-05      0.66      62     130 .]      70     142 .]      69     142 .] 0.72

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 2.2e-05
                HHHHHHHTTS-EESSSEE--EEEEESS-S CS
        NuiA  5 eqLeeltegLLymSeSdypfeviswevda 33
                  L+e+++g  y+SeSd+ f++i +e+  
  EPX72220.1 46 SALSEQVKGHYYISESDEIFHPIYLEEIP 74
                6799999****************998764 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 3.7e-05
                 TTCTT--SSTS-HHHHHHHHHHHHHHHHHTTHSSEEEE....EEESSSSEEEEEEEC-TTSSEEEEEEEEE-- CS
        NuiA  62 lrnalteeewyeeeekeeaqrfqtlvklLksnLtdlkv....yRvgeveidvyilGktksgelaGlkTkvveT 130
                 l+++ +e    +++e +    + +++k+ +s  ++  v    y+     i  yil k ++g++ Gl T  v T
  EPX72220.1  70 LEEIPKEFRSINKKEFDPRDEYGAIIKAVQSCCNSNTVqffsYQDTASTIIYYILSKLENGHWCGLTTMEVST 142
                 5566666666777777777778888888887775544444445555577888***************998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       544  (0.0303419); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.28s 00:00:00.71 Elapsed: 00:00:00.45
# Mc/sec: 957.65
//
Query:       EPX72221.1  [L=789]
Description: ataxin-2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.7e-27   95.8   1.0    1.7e-27   95.8   1.0    3.0  3  LsmAD      LsmAD domain


Domain annotation for each model (and alignments):
>> LsmAD  LsmAD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.1      0.83   1.5e+04      44      49 ..      44      49 ..      21      65 .. 0.52
   2 !   95.8   1.0   9.4e-32   1.7e-27       1      71 []     164     234 ..     164     234 .. 0.99
   3 ?   -5.2   6.7         1   1.8e+04      13      63 ..     358     408 ..     356     428 .. 0.66

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 0.83
       LsmAD 44 nahvae 49
                + ++  
  EPX72221.1 44 SERIYT 49
                222222 PP

  == domain 2  score: 95.8 bits;  conditional E-value: 9.4e-32
       LsmAD   1 FgvkstYdEnlYTtkldksspeykereaeAeriArEIessastnahvaeerglkvddsgldEEdkYSaVrR 71 
                 Fgv+s++dE+ YT ++++++p+yker +eA+riA+EIessa++n+h+aeerglk ddsgldE+d+YS+V+R
  EPX72221.1 164 FGVQSHFDEEQYTSSINRNHPKYKERAQEADRIAKEIESSATDNVHLAEERGLKPDDSGLDEDDLYSGVQR 234
                 9****************************************************99***************9 PP

  == domain 3  score: -5.2 bits;  conditional E-value: 1
       LsmAD  13 TtkldksspeykereaeAeriArEIessast.nahvaeerglkvddsgldEE 63 
                 T+k + s++ +k++e + ++ +  +e+++++ +a  + ++++  ++++++EE
  EPX72221.1 358 TMKANVSDDTTKQKEDAPSKDEPSVEKTDKApTATKESDKEE-KTQQKQEEE 408
                 566666778888888888888888888855523333333333.233334444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (789 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1768  (0.0986112); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        98  (0.005466); expected 17.9 (0.001)
Passed Fwd filter:                        42  (0.00234257); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.09u 0.34s 00:00:01.43 Elapsed: 00:00:00.49
# Mc/sec: 4853.07
//
Query:       EPX72222.1  [L=54]
Description: hypothetical protein SOCG_05525 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (54 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       402  (0.0224218); expected 358.6 (0.02)
Passed bias filter:                      272  (0.015171); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.43
# Mc/sec: 377.49
//
Query:       EPX72223.1  [L=122]
Description: GTPase regulator Nrf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.7e-14   51.9   4.3    7.7e-14   51.9   4.3    1.8  2  DUF202    Domain of unknown function (DUF202)


Domain annotation for each model (and alignments):
>> DUF202  Domain of unknown function (DUF202)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.9   4.3   4.3e-18   7.7e-14       1      67 [.      24      85 ..      24      86 .. 0.92
   2 ?   -0.8   0.4      0.12   2.1e+03      18      30 ..     104     116 ..      99     122 .] 0.56

  Alignments for each domain:
  == domain 1  score: 51.9 bits;  conditional E-value: 4.3e-18
      DUF202  1 rdglAnERTfLaWlRtslalialglallrffltgepsalgkilglilivlgiltllvglvrylrrqr 67
                ++++AnERTfL+Wl+++++l++l+++ll+f   g++   g+i + ++ v++i t++++l  y++r++
  EPX72223.1 24 KVFFANERTFLSWLSFAVVLGGLSVGLLNF---GDRI--GRISAGLFTVVAIGTMAYALSIYHWRAS 85
                689**************************8...5654..5999********************9985 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.12
      DUF202  18 lalialglallrf 30 
                 l ++ l++ l++f
  EPX72223.1 104 LCFVLLAAILTNF 116
                 4455555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       474  (0.0264376); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.29s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 781.94
//
Query:       EPX72224.1  [L=505]
Description: ARS-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.2e-50  171.5   1.1    1.2e-50  171.5   1.1    2.3  3  DDE_1        DDE superfamily endonuclease
    1.4e-24   85.5   0.6    1.4e-24   85.5   0.6    2.1  2  HTH_ABP1_N   Fission yeast centromere protein N-terminal doma
    2.2e-14   53.2   0.2    8.5e-14   51.3   0.2    2.0  1  HTH_Tnp_Tc5  Tc5 transposase DNA-binding domain


Domain annotation for each model (and alignments):
>> DDE_1  DDE superfamily endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       0.8   4.8e+03      60      73 ..      34      48 ..      28      75 .. 0.75
   2 ?   -2.1   0.0      0.45   2.7e+03      57      71 ..     126     140 ..     124     160 .. 0.76
   3 !  171.5   1.1   2.1e-54   1.2e-50       1     175 []     196     372 ..     196     372 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 0.8
       DDE_1 60 eeWL.kvfdkrleae 73
                 +W+ + fdk l ++
  EPX72224.1 34 MAWFkEKFDKELSQP 48
                568888888887743 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.45
       DDE_1  57 sifeeWLkvfdkrle 71 
                 +  ++WLk+f+k   
  EPX72224.1 126 EFSSNWLKRFQKHPS 140
                 556899999998654 PP

  == domain 3  score: 171.5 bits;  conditional E-value: 2.1e-54
       DDE_1   1 kerltvllcanaagsekLkplvigkaksprafkngektkkkldveyksnrkawltssifeeWLkvfdkrleaekrkilLlldssrshe.tvel..lese 96 
                 k+r+++++c+na g+ kL++++ig++k+praf+++ ++ + ldve++sn++a + + i++eWL +fd+++   +rk+lLlld+  +he +ve+    + 
  EPX72224.1 196 KARVSIAMCCNALGTDKLPLWIIGYSKEPRAFRSARVNIHALDVEWRSNGTAQINNIIMQEWLIWFDQKMS--GRKVLLLLDRLSAHEcAVENirRTRS 292
                 689********************************************************************..***************99999988899 PP

       DDE_1  97 lqniklvflPassasllqPldqgvvselKarYrrqllqalleeqnrlskeqkkltlldalkfikkAwn.avsketiksaf 175
                  qni ++ lP ss+ +  P + g++ ++K++Yr ++lq+++e+ +  +++ k++++l+a++++ +Awn +vs ++i+ +f
  EPX72224.1 293 FQNIAILWLPRSSNLTQNPYSMGIFRNFKECYRNYWLQYMMEQISLGRDPLKAVNILKAIHWMVAAWNfDVSNSSIAFSF 372
                 9**************************************************************************98665 PP

>> HTH_ABP1_N  Fission yeast centromere protein N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.5   0.6   2.4e-28   1.4e-24       1      60 [.       5      64 ..       5      65 .. 0.98
   2 ?   -3.2   0.2       1.2   7.3e+03      30      47 ..     352     369 ..     350     371 .. 0.82

  Alignments for each domain:
  == domain 1  score: 85.5 bits;  conditional E-value: 2.4e-28
  HTH_ABP1_N  1 rRkaiskeqkkaLRawafqqnprpsqkaliaWFeqeygqkisqstvSeiLSskYayLDda 60
                rR+ i+k++kk+LR+++f + ++psq++l+aWF++++++++sq++vS+iLSskY++LD++
  EPX72224.1  5 RRQVITKNEKKELRRFYFGCVEKPSQQKLMAWFKEKFDKELSQPSVSQILSSKYDFLDET 64
                8*********************************************************97 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.2
  HTH_ABP1_N  30 iaWFeqeygqkisqstvS 47 
                 i W    ++ ++s s++ 
  EPX72224.1 352 IHWMVAAWNFDVSNSSIA 369
                 789999999999999985 PP

>> HTH_Tnp_Tc5  Tc5 transposase DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.3   0.2   1.4e-17   8.5e-14       1      58 [.      79     137 ..      79     144 .. 0.97

  Alignments for each domain:
  == domain 1  score: 51.3 bits;  conditional E-value: 1.4e-17
                  THHHHHHHHHHHHHHC-CT---SCHHHHHHHHHHH.HHSSSCT-TT-S--CHHHHHHHH CS
  HTH_Tnp_Tc5   1 spelEkaLleWirqlrergipitgelirekAqela.slaadlgepdfkaSkgWldrFkk 58 
                  +p+lE aL+eWi++++++ i i++e+ir+ A el+ + +a+ ++p++ +S++Wl+rF k
   EPX72224.1  79 YPVLESALVEWIQRTQKSDIDINEEVIRKVACELWkKIPAYSNLPTPEFSSNWLKRFQK 137
                  799******************************************************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (505 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       779  (0.0434492); expected 358.6 (0.02)
Passed bias filter:                      487  (0.0271627); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.44
# Mc/sec: 3442.07
//
Query:       EPX72225.1  [L=314]
Description: WD repeat protein Pop3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.8e-42  141.9  11.6    7.3e-12   45.6   0.1    8.1  8  WD40           WD domain, G-beta repeat
    3.8e-12   46.3   0.5     0.0051   17.1   0.0    5.1  5  ANAPC4_WD40    Anaphase-promoting complex subunit 4 WD40 doma
    2.7e-10   39.8   0.1     0.0029   16.6   0.0    3.8  3  Ge1_WD40       WD40 region of Ge1, enhancer of mRNA-decapping
    2.2e-05   23.6   0.1     0.0001   21.4   0.0    2.1  2  PALB2_WD40     Partner and localizer of BRCA2 WD40 domain
    3.9e-05   22.5   3.8       0.11   11.1   0.1    4.0  4  Nup160         Nucleoporin Nup120/160
    0.00021   21.1   0.2       0.77    9.4   0.0    3.6  3  Hira           TUP1-like enhancer of split
  ------ inclusion threshold ------
      0.017   13.9   0.1       0.86    8.3   0.0    3.0  2  Nucleoporin_N  Nup133 N terminal like
      0.027   14.0   0.0      0.089   12.3   0.0    1.8  1  HPS3_N         Hermansky-Pudlak syndrome 3
      0.063   12.3   0.0      0.099   11.7   0.0    1.2  1  Coatomer_WDAD  Coatomer WD associated region


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   0.0   9.3e-05      0.18      21      37 ..       8      25 ..       1      26 [. 0.67
   2 !   18.2   0.0   1.7e-06    0.0034       3      38 .]      32      67 ..      30      67 .. 0.81
   3 !   45.6   0.1   3.6e-15   7.3e-12       3      38 .]      75     111 ..      73     111 .. 0.96
   4 !    7.4   0.1    0.0043       8.6       5      38 .]     119     152 ..     116     152 .. 0.86
   5 !    7.2   0.0     0.005       9.9      14      37 ..     171     194 ..     157     195 .. 0.80
   6 !   21.1   0.0     2e-07   0.00041       2      38 .]     206     243 ..     205     243 .. 0.89
   7 !   26.3   0.1   4.7e-09   9.4e-06       5      37 ..     253     286 ..     250     287 .. 0.89
   8 ?    3.6   0.0     0.069   1.4e+02       1      17 [.     291     308 ..     291     313 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 9.3e-05
                TSSE.EEEEETTSEEEEE CS
        WD40 21 dgaw.lasGsdDgtvriW 37
                 ++  l+s+++D+t+r+W
  EPX72225.1  8 QHSVlLVSSGYDHTIRFW 25
                44441567778******* PP

  == domain 2  score: 18.2 bits;  conditional E-value: 1.7e-06
                EEEEEESS.SS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  3 clrtltGH.ss.vtslafspdgawlasGsdDgtvriWd 38
                c rt+  H +  v+ l+ sp++++la++  +++vr++d
  EPX72225.1 32 CSRTI-QHaDTqVNRLCISPNKRFLAAAE-NPHVRLYD 67
                66776.585336*************8655.******98 PP

  == domain 3  score: 45.6 bits;  conditional E-value: 3.6e-15
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +l t++GH ++vt++af+ dg+wla++s+Dgtv++Wd
  EPX72225.1  75 PLMTFEGHtNNVTGVAFHCDGKWLATSSEDGTVKVWD 111
                 689*****999*************************9 PP

  == domain 4  score: 7.4 bits;  conditional E-value: 0.0043
                 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 r +  H s+v++l  +p++  l+s++  g v  Wd
  EPX72225.1 119 RNY-DHkSPVNDLFIHPNQGELISCDQSGRVSAWD 152
                 555.49788***************99999999998 PP

  == domain 5  score: 7.2 bits;  conditional E-value: 0.005
                 EEEEEETTSSEEEEEETTSEEEEE CS
        WD40  14 tslafspdgawlasGsdDgtvriW 37 
                 +s+ + +dg++l++G  +g++++W
  EPX72225.1 171 SSVTVASDGSMLIAGNNKGNCYVW 194
                 788899*********89******* PP

  == domain 6  score: 21.1 bits;  conditional E-value: 2e-07
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 q++ ++ +H   +t +  spd + la++s D tv iW+
  EPX72225.1 206 QPVVKFQAHpRYITRCVLSPDVKHLATCSADSTVNIWS 243
                 6788899**555*9999********************5 PP

  == domain 7  score: 26.3 bits;  conditional E-value: 4.7e-09
                 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   5 rtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 r l GH  +v+++afs d+++l+++s D+  r+W
  EPX72225.1 253 RRLQGHqRWVWDCAFSADSTYLVTASSDHVARLW 286
                 5689**777**************9988******* PP

  == domain 8  score: 3.6 bits;  conditional E-value: 0.069
                 TEEEEEEESS.SS.EEEEE CS
        WD40   1 gqclrtltGH.ss.vtsla 17 
                 g+++r ++GH +  v ++a
  EPX72225.1 291 GETIRQYSGHhKAaV-CVA 308
                 578999****86667.885 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.0   0.00045       0.9      33      72 ..      35      73 ..      20      82 .. 0.81
   2 !   17.1   0.0   2.6e-06    0.0051      36      81 ..      81     126 ..      76     176 .. 0.91
   3 ?    0.6   0.0      0.34   6.9e+02      36      66 ..     165     195 ..     162     207 .. 0.80
   4 ?    2.3   0.0       0.1   2.1e+02      27      70 ..     206     247 ..     180     259 .. 0.72
   5 !    9.6   0.1   0.00056       1.1      37      87 ..     258     307 ..     250     311 .. 0.86

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00045
  ANAPC4_WD40 33 eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkv 72
                 + ++ d +v+ L+ +p+ ++La a ++ +vrl+d++s   
   EPX72225.1 35 TIQHADTQVNRLCISPNKRFLAAA-ENPHVRLYDINSNSQ 73
                 5577899**************965.799******998765 PP

  == domain 2  score: 17.1 bits;  conditional E-value: 2.6e-06
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  ++ ++v+++a++ dgk La + +dg+v++ d+    v ++++ ks 
   EPX72225.1  81 GHTNNVTGVAFHCDGKWLATSSEDGTVKVWDMRAPSVQRNYDHKSP 126
                  67899**************************998888877776665 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.34
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlld 66 
                  +ed   +s+    dg++L  + ++g++ +  
   EPX72225.1 165 EEDVPMSSVTVASDGSMLIAGNNKGNCYVWR 195
                  56777788888999*******9999987665 PP

  == domain 4  score: 2.3 bits;  conditional E-value: 0.1
  ANAPC4_WD40  27 qrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesg 70 
                  q v+++  +++ + ++    +pd k La   +d++v++ +  + 
   EPX72225.1 206 QPVVKF--QAHPRYITRCVLSPDVKHLATCSADSTVNIWSTDDM 247
                  445555..67778889999999****************998765 PP

  == domain 5  score: 9.6 bits;  conditional E-value: 0.00056
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtcl 87 
                  +++ v + a++ d + L+ a sd   rl + +sg++++++s +++   +c+
   EPX72225.1 258 HQRWVWDCAFSADSTYLVTASSDHVARLWELSSGETIRQYSGHHKA-AVCV 307
                  56667788999*****************************999885.5565 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.5e-06    0.0029     180     217 ..      75     113 ..      55     142 .. 0.84
   2 !    9.6   0.0    0.0002      0.39     173     214 ..     200     242 ..     190     248 .. 0.86
   3 !    8.8   0.0   0.00034      0.68     185     217 ..     256     289 ..     243     302 .. 0.82

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.5e-06
    Ge1_WD40 180 gllkieehs.liveaafspdGtalatasedGevkffqvy 217
                  l+ +e h+ +++  af  dG  lat+sedG+vk + + 
  EPX72225.1  75 PLMTFEGHTnNVTGVAFHCDGKWLATSSEDGTVKVWDMR 113
                 67888999879************************9875 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.0002
    Ge1_WD40 173 sveeieegllkieehs.liveaafspdGtalatasedGevkff 214
                 + +++ + ++k++ h+  i+  ++spd   lat+s+d +v  +
  EPX72225.1 200 QGASLLQPVVKFQAHPrYITRCVLSPDVKHLATCSADSTVNIW 242
                 6666778899*****879**********************988 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.00034
    Ge1_WD40 185 eehs.liveaafspdGtalatasedGevkffqvy 217
                 + h   + + afs+d t l tas+d + +++ + 
  EPX72225.1 256 QGHQrWVWDCAFSADSTYLVTASSDHVARLWELS 289
                 555547999********************99875 PP

>> PALB2_WD40  Partner and localizer of BRCA2 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.63   1.3e+03     303     321 ..      21      38 ..      11      67 .. 0.66
   2 !   21.4   0.0     5e-08    0.0001     300     350 ..     144     194 ..     138     195 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.63
  PALB2_WD40 303 aiavWdlllghctalllpe 321
                 +i +W+ l g c+  +  +
  EPX72225.1  21 TIRFWEALSGICSRTIQ-H 38 
                 78888888888865543.3 PP

  == domain 2  score: 21.4 bits;  conditional E-value: 5e-08
  PALB2_WD40 300 tsGaiavWdlllghctalllpesdesWslvrWsgtdsqllaGqkdGsvlvy 350
                  sG ++ Wdl    ct  l+pe d   s v  ++  s+l+aG+++G+ +v+
  EPX72225.1 144 QSGRVSAWDLGEDSCTHELIPEEDVPMSSVTVASDGSMLIAGNNKGNCYVW 194
                 59**********************************************997 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.1     0.012        24     239     267 ..      19      52 ..       7     113 .. 0.60
   2 ?    2.1   0.0      0.03        59     229     248 ..      94     113 ..      79     148 .. 0.78
   3 !    4.7   0.1    0.0047       9.5     220     258 ..     216     255 ..     198     261 .. 0.82
   4 !   11.1   0.1   5.4e-05      0.11     227     255 ..     269     296 ..     258     304 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.012
                 T-EEEEEETTTTEEEEEEE--......-SSSTTS CS
      Nup160 239 dgkLrvWnlltgkclatidll.....rdeeaqde 267
                 d+++r W  l+g c +ti+       r  +++++
  EPX72225.1  19 DHTIRFWEALSGICSRTIQHAdtqvnRLCISPNK 52 
                 7888888888888888766553333333333333 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.03
                 TTTEEEEEETT-EEEEEETT CS
      Nup160 229 gqtylfalsrdgkLrvWnll 248
                 + + l++ s dg+++vW+ +
  EPX72225.1  94 DGKWLATSSEDGTVKVWDMR 113
                 556789999********986 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.0047
                 EEET......TTTEEEEEETT-EEEEEETTTTEEEEEEE- CS
      Nup160 220 dvavavvei.gqtylfalsrdgkLrvWnlltgkclatidl 258
                 + ++++v + + ++l++ s d ++ +W++++++ +  + l
  EPX72225.1 216 RYITRCVLSpDVKHLATCSADSTVNIWSTDDMSFMLERRL 255
                 5677888778999*****************9998776655 PP

  == domain 4  score: 11.1 bits;  conditional E-value: 5.4e-05
                 ..TTTEEEEEETT-EEEEEETTTTEEEEE CS
      Nup160 227 eigqtylfalsrdgkLrvWnlltgkclat 255
                   ++tyl+++s+d++ r+W l++g ++++
  EPX72225.1 269 A-DSTYLVTASSDHVARLWELSSGETIRQ 296
                 3.9*******************9988875 PP

>> Hira  TUP1-like enhancer of split
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.0   0.00039      0.77      15      45 ..      89     119 ..      85     167 .. 0.85
   2 !    5.6   0.0    0.0056        11      14      41 ..     172     199 ..     161     237 .. 0.76
   3 ?   -2.3   0.0       1.5     3e+03      19      46 ..     225     252 ..     218     255 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00039
        Hira  15 sfLessgsyLlavtsvgllyvWnvkkkkvll 45 
                 + +++ g++L+  +++g++ vW+++  +v+ 
  EPX72225.1  89 VAFHCDGKWLATSSEDGTVKVWDMRAPSVQR 119
                 5689********************9888765 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.0056
        Hira  14 asfLessgsyLlavtsvgllyvWnvkkk 41 
                  + ++s gs+L+a  ++g++yvW + + 
  EPX72225.1 172 SVTVASDGSMLIAGNNKGNCYVWRMLNH 199
                 56788999***************99332 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 1.5
        Hira  19 ssgsyLlavtsvgllyvWnvkkkkvllp 46 
                    ++L+  +++ ++ +W ++ ++ +l+
  EPX72225.1 225 PDVKHLATCSADSTVNIWSTDDMSFMLE 252
                 4558899999999999999999888774 PP

>> Nucleoporin_N  Nup133 N terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.0   0.00043      0.86     213     252 ..      95     134 ..      66     187 .. 0.82
   2 ?    2.0   0.1     0.034        67     213     233 ..     271     290 ..     199     302 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00043
                    TCEEEEEETTSEEEEEEEETTCEE-EEEEEEEHHHHHHHH CS
  Nucleoporin_N 213 rrilytlsskgvirvydlsasngesslksdidirqillea 252
                     ++l t s++g+++v+d+ a++ +++ +++  +++ +++ 
     EPX72225.1  95 GKWLATSSEDGTVKVWDMRAPSVQRNYDHKSPVNDLFIHP 134
                    38*****************999999999998888888876 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.034
                    TCEEEEEETTSEEEEEEEETT CS
  Nucleoporin_N 213 rrilytlsskgvirvydlsas 233
                    +  l+t+ss++v r ++ls s
     EPX72225.1 271 STYLVTASSDHVARLWELS-S 290
                    3578999999999999988.4 PP

>> HPS3_N  Hermansky-Pudlak syndrome 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   4.5e-05     0.089      11      78 ..      34     103 ..      32     127 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 4.5e-05
      HPS3_N  11 qevvsveqeptavcaagdk.Llvatesgcvevydleeeeckvlcrfst.vdkvlkiaysesGdyvatlEe 78 
                  +++  + +++++c++++k +l a+e+  v  yd++++   +l++f+   ++v+ +a+   G+++at  e
  EPX72225.1  34 RTIQHADTQVNRLCISPNKrFLAAAENPHVRLYDINSNSQLPLMTFEGhTNNVTGVAFHCDGKWLATSSE 103
                 578888999********884666666667*****888888889999852688999999999**9999655 PP

>> Coatomer_WDAD  Coatomer WD associated region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0     5e-05     0.099      27     159 ..      35     182 ..      30     201 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 5e-05
                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.......XXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXX CS
  Coatomer_WDAD  27 elgsieiypqslshnpngrfvlVcgdgeyiiyt.......alalrnkaygkgldfvwvssnr.favlessksvkifknfkekktksikleyqvdki 114
                     ++  +++++ l ++pn+rf++  ++    +y         l   +  + + + +++   ++  a   + ++vk+      +++++ +++  v+++
     EPX72225.1  35 TIQHADTQVNRLCISPNKRFLAAAENPHVRLYDinsnsqlPLMTFEGHTNNVTGVAFHCDGKwLATSSEDGTVKVWDMRAPSVQRNYDHKSPVNDL 130
                    56778899999************9999999999999987744455555555555666666665888888******7777888899*********** PP

                    XX....XXXXXXXXXX.XXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXX CS
  Coatomer_WDAD 115 fg....GalLgvksegsvsfYDweqgklvrridvk...kvknVvwsddgelv 159
                    f     G l+  +++g vs +D+ + +  +++  +   +++ V +  dg+++
     EPX72225.1 131 FIhpnqGELISCDQSGRVSAWDLGEDSCTHELIPEedvPMSSVTVASDGSML 182
                    **********************987766555432211223666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       401  (0.022366); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 2179.81
//
Query:       EPX72226.1  [L=481]
Description: myosin binding vezatin family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.042   13.2   0.1       0.11   11.8   0.0    1.6  2  CorA      CorA-like Mg2+ transporter protein


Domain annotation for each model (and alignments):
>> CorA  CorA-like Mg2+ transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1      0.24   4.3e+03     145     167 ..     294     316 ..     291     327 .. 0.78
   2 ?   11.8   0.0     6e-06      0.11     119     219 ..     362     474 ..     358     477 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 0.24
        CorA 145 tkkeilrelaqlrrrlvklrral 167
                 +++ ++++l+ lr+++ ++ ++ 
  EPX72226.1 294 NRNLQRNSLYCLRKEANEYNSHS 316
                 56778899999999998887664 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 6e-06
        CorA 119 ivdrlfellekleeeldeledel............edstkkeilrelaqlrrrlvklrralapnrevlkrllakaddkllddedkeylrdlldelerll 205
                 ++d++ ++l++  e+l+  +  +             + ++++ + ++ +l+++l kl+ a++++ e ++ +l+ + d +  + + + +++   +l+ l+
  EPX72226.1 362 NIDSFVATLREFTEQLHSFSPSMpesgvvtpeneyLNHSNRNGIVDMDDLKKKLQKLHFAMLETHENISLHLQENSDAHSQEGALKEYDHFGFQLKGLI 460
                 6899999999999999999999999999999999988999999999999*******************55555444444444444559999999999** PP

        CorA 206 emlealrerleslq 219
                  + e++r++l+ ++
  EPX72226.1 461 SEWEFYRDMLSPMS 474
                 *********99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (481 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       733  (0.0408835); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.40
# Mc/sec: 3607.73
//
Query:       EPX72227.1  [L=390]
Description: glycosyl hydrolase family 16 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.4e-07   29.3   0.0    5.9e-06   25.9   0.0    2.2  1  Glyco_hydro_16  Glycosyl hydrolases family 16


Domain annotation for each model (and alignments):
>> Glyco_hydro_16  Glycosyl hydrolases family 16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9   0.0   3.3e-10   5.9e-06      20      93 ..     145     226 ..     125     328 .. 0.74

  Alignments for each domain:
  == domain 1  score: 25.9 bits;  conditional E-value: 3.3e-10
                     SEEEEEEEE.......EEEEEEEECCEESSEEEEEEEE.---STTEEEEEEEETGGTSTTEEEEE.EEETT-TTEEEEEEEBT CS
  Glyco_hydro_16  20 etltltldk.......esgsrikskksflyGkvearik.aaksaGvvtafylssedekahdEiDi.EflGndtgkvqtnvygk 93 
                     +++ +t+d+       + + ri++kk+f+   +  ++  a+++ G+++af++  +++++ +EiDi E++ n  +k q +++++
      EPX72227.1 145 TNVIMTADHkdkypngRPSVRISTKKQFKEVLIILDVLhAPTGCGTWPAFWTVGDNWPKNGEIDImENV-NLARKGQVTLHTD 226
                     45555665567776656678888888877776666665799***********9988************9.6666666666653 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (390 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       708  (0.0394891); expected 358.6 (0.02)
Passed bias filter:                      599  (0.0334096); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.39
# Mc/sec: 3020.16
//
Query:       EPX72228.1  [L=200]
Description: hypothetical protein SOCG_04919 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       383  (0.021362); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 1389.26
//
Query:       EPX72229.1  [L=523]
Description: acetyl-CoA transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.5e-109  367.0  39.2    4.5e-61  207.0  17.6    3.6  3  Acatn       Acetyl-coenzyme A transporter 1
  ------ inclusion threshold ------
      0.034   13.7   0.0      0.069   12.8   0.0    1.5  1  EF_assoc_1  EF hand associated


Domain annotation for each model (and alignments):
>> Acatn  Acetyl-coenzyme A transporter 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  207.0  17.6     5e-65   4.5e-61       3     225 ..      58     262 ..      56     265 .. 0.92
   2 !   48.3   0.1   5.9e-17   5.3e-13     259     342 ..     260     343 ..     257     347 .. 0.94
   3 !  122.8   8.5   1.6e-39   1.5e-35     372     548 .]     344     515 ..     340     515 .. 0.89

  Alignments for each domain:
  == domain 1  score: 207.0 bits;  conditional E-value: 5e-65
       Acatn   3 ylLvvLyllqGiPvGLafgtiPflLkslaketsftelgvfslatyPyslkilWsPivDslyskkiGrrrsWiiPvqlvsgilllvlglaiskglifegv 101
                  +L++Lyl+qG+P+GL  g+iP++Lk    + ++++++ +sla+yPyslk+lWsPivD+ y+ k Grr++W+ P  +  +  llv+++          +
  EPX72229.1  58 VFLILLYLIQGVPMGLIKGSIPYFLKP---HCTYSDIATYSLASYPYSLKVLWSPIVDTYYFPKFGRRKTWVAPCTFFLACTLLVFSYN---------I 144
                 679***********************9...99*********************************************999999988854.........5 PP

       Acatn 102 ddafhgeasekvlkvnilsLtlvflvLvllcatqDiavDgWaltiLskkslsyastaqtvGlnlGyflsftvflslnssdfvnkylrkvpleyglvsls 200
                 d + +        + +i+s+t++ ++Lv++catqDiavDgW+l++L  ++l yastaqtvGln+Gyflsftv+l l s +f+n  lr  +l+ gl++ls
  EPX72229.1 145 DIWIE------RGSSYINSFTVWSFFLVFICATQDIAVDGWSLNMLDVHQLNYASTAQTVGLNTGYFLSFTVLLVLTSPEFANSVLRISTLNEGLITLS 237
                 66664......2346899********************************************************************************* PP

       Acatn 201 gylklaGllyllvtlyvvfltkekp 225
                 gy++++ l+ l+  + +++  ++kp
  EPX72229.1 238 GYIRFWALITLVSVVLILVWEEQKP 262
                 ******9999887777777666665 PP

  == domain 2  score: 48.3 bits;  conditional E-value: 5.9e-17
       Acatn 259 eksektssiksvyrllikvlkLksvrllalihlisklafqcneaatnlkLLekGlkreDlavtvlidvPfeiifgyyvakwssd 342
                 +k e+++++k  +r++  +l L+++++l ++hl+ k++f  ne+ t lk  e Gl++  l +++li++P+ +i+g+y+ + s++
  EPX72229.1 260 QKPEHVANMKDTFRSIRDILSLRNMKQLLVVHLFGKVGFVANETLTLLKATESGLNKAMLSLIILINFPLGLILGVYIGHISNK 343
                 56788999**********************************************************************999875 PP

  == domain 3  score: 122.8 bits;  conditional E-value: 1.6e-39
       Acatn 372 gvltPWlygflgrllaailgsyvvksfPkdgeitksyfllviiqhllgsflstvqfvgisafhtriaDpvlgGtymtllntlsnlGgtWprllvlslid 470
                 + l  Wl+g+ gr ++ +l   +v++    +e    +  ++i+  l +sf+ tvqfv+i  fh++i+Dp++gGtymt+lnt+snlGgtWp+ ++l l d
  EPX72229.1 344 RPLYVWLWGYWGRTISIVLNVALVYAVTYFSEKLSLFLAILICYTLNASFM-TVQFVSIGVFHSQISDPAIGGTYMTILNTISNLGGTWPQYIMLKLAD 441
                 55778***************9999888776666666777778888888888.8********************************************** PP

       Acatn 471 yftiyecvledksketvllknaskelctkslggkvsivrDgyyvtnllCivlGillyftylkkkaqkLqklpisaWrv 548
                  +t   c++ ++      +++  k++c +  gg++   rDgyy t++l i+l ill +  +  +++kL+k+p s+W++
  EPX72229.1 442 WVTFSYCSADHN---LRCITDDVKNVCAS-KGGQCIYKRDGYYFTSILGIFLSILLCIITIFPIVRKLNKVPASSWHI 515
                 ********7544...33346778888887.9*********************************************86 PP

>> EF_assoc_1  EF hand associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   7.7e-06     0.069      11      35 ..     227     251 ..     216     255 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 7.7e-06
  EF_assoc_1  11 vtneegavtlqGwLaqWsltTlldv 35 
                  t +eg +tl+G++  W+l+Tl+ v
  EPX72229.1 227 STLNEGLITLSGYIRFWALITLVSV 251
                 56689*****************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (523 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       899  (0.0501422); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.42
# Mc/sec: 3740.11
//
Query:       EPX72230.1  [L=85]
Description: hypothetical protein SOCG_04921 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.8e-08   33.6   1.5    2.8e-06   28.9   0.0    2.0  2  S36_mt    Ribosomal protein S36, mitochondrial


Domain annotation for each model (and alignments):
>> S36_mt  Ribosomal protein S36, mitochondrial
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.4   0.9    0.0061   1.1e+02       4      37 ..       7      34 ..       4      45 .. 0.68
   2 !   28.9   0.0   1.6e-10   2.8e-06      83     115 .]      50      82 ..      32      82 .. 0.76

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.0061
      S36_mt  4 IkFlGkrtiPasvdhtpkpHPaspsgslPesksf 37
                I+F+ + t  +s  +  +pHPa p   lP+  sf
  EPX72230.1  7 IQFVKHLT--KSSAE-RHPHPAVPF-ALPS--SF 34
                66776555..44333.68****998.8888..44 PP

  == domain 2  score: 28.9 bits;  conditional E-value: 1.6e-10
      S36_mt  83 kkgeffdrseLParfrrkpideaEieaiesGGa 115
                     + dr+eL+ rf+r p+++ E+++iesGGa
  EPX72230.1  50 DVFIANDRNELSPRFHRMPVSDLEMNIIESGGA 82 
                 3355689*************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       190  (0.0105974); expected 358.6 (0.02)
Passed bias filter:                      177  (0.00987227); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.22s 00:00:00.56 Elapsed: 00:00:00.36
# Mc/sec: 709.86
//
Query:       EPX72231.1  [L=262]
Description: 40S ribosomal protein S4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.5e-38  130.5   0.7    3.2e-38  129.5   0.7    1.6  1  Ribosomal_S4e  Ribosomal family S4e
    1.2e-26   92.1   0.1    2.5e-26   91.0   0.1    1.6  1  40S_S4_C       40S ribosomal protein S4 C-terminus
    3.6e-19   68.6   8.2    7.6e-19   67.5   8.2    1.6  1  RS4NT          RS4NT (NUC023) domain
    8.9e-07   28.5   0.2    2.1e-06   27.4   0.0    1.8  2  S4             S4 domain
    0.00011   22.0   0.7    0.00054   19.8   0.4    2.4  2  KOW            KOW motif


Domain annotation for each model (and alignments):
>> Ribosomal_S4e  Ribosomal family S4e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.5   0.7     9e-42   3.2e-38       1      75 []      95     169 ..      95     169 .. 0.99

  Alignments for each domain:
  == domain 1  score: 129.5 bits;  conditional E-value: 9e-42
                    TTEEEEEEE-TTSSEEEEEE-TTCCCEEEEEECEEEEECCCEEEEEETTS-EEEESSTT-STTEEEEEETTTTEE CS
  Ribosomal_S4e   1 tgenyrllydtkgrfalhkItseeakyKLcKikkkttvkkgipqlvthdGrtirypdpdikvnDtvkidleenkI 75 
                    tge++rl+yd+kgrf++h+It+eeakyKLcK+k+++++ kgip +vthdGrtirypdp+ikvnDt+k++le+nkI
     EPX72231.1  95 TGEHFRLVYDVKGRFTVHRITAEEAKYKLCKVKRVQLGAKGIPFIVTHDGRTIRYPDPLIKVNDTIKLNLETNKI 169
                    89************************************************************************9 PP

>> 40S_S4_C  40S ribosomal protein S4 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.0   0.1   7.1e-30   2.5e-26       1      46 [.     212     257 ..     212     259 .. 0.97

  Alignments for each domain:
  == domain 1  score: 91.0 bits;  conditional E-value: 7.1e-30
                 -SSS-EEEEEGGGEEE--STTS-SS---SS-S----HHHHHHHHHH CS
    40S_S4_C   1 DaaGntFATRlsNvFvIGkgnkpwvsLPkgkGiklsiaeerdkrla 46 
                 Da++++FATRlsNvFvIG+ nk+w+sLPkgkG+klsi+eerd+r+a
  EPX72231.1 212 DALDREFATRLSNVFVIGETNKSWISLPKGKGVKLSITEERDRRRA 257
                 9*******************************************98 PP

>> RS4NT  RS4NT (NUC023) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.5   8.2   2.1e-22   7.6e-19       1      37 []       3      39 ..       3      39 .. 0.98

  Alignments for each domain:
  == domain 1  score: 67.5 bits;  conditional E-value: 2.1e-22
                -S----EETTTS-TTS---SSSSSEE----SSSS-TT CS
       RS4NT  1 rGpkkHLKrlaAPkhWpldkkegvfavkPspGPHklr 37
                rGpkkHLKr+aAP+hW+ldk++g++a+kPs+GPHk+r
  EPX72231.1  3 RGPKKHLKRVAAPHHWLLDKLSGTYAPKPSAGPHKAR 39
                8**********************************87 PP

>> S4  S4 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   0.0   5.7e-10   2.1e-06       2      48 .]      43      90 ..      42      90 .. 0.95
   2 ?   -2.8   0.0       1.5   5.3e+03      31      48 .]     143     160 ..     140     160 .. 0.73

  Alignments for each domain:
  == domain 1  score: 27.4 bits;  conditional E-value: 5.7e-10
                EHHHHH.HHTTSSSSHHHHHHHHHTTTEEETTEEE--TT-EE-TTCEE CS
          S4  2 RLdkvl.arlglassrreArqlIehGrVlVNGkvvkdpsyrVkpgDvi 48
                +L ++l  rl++a   re+r + +++ ++V+Gkv++d  ++ +++Dvi
  EPX72231.1 43 PLIVFLrNRLKYALNGREVRAILMQRLIKVDGKVRTDNTFPTGFMDVI 90
                67889999*************************************998 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.5
                 TTEEE--TT-EE-TTCEE CS
          S4  31 NGkvvkdpsyrVkpgDvi 48 
                 +G+ ++ p   +k++D+i
  EPX72231.1 143 DGRTIRYPDPLIKVNDTI 160
                 788888787778888876 PP

>> KOW  KOW motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       1.8   6.5e+03       9      15 ..      33      39 ..      33      41 .. 0.76
   2 !   19.8   0.4   1.5e-07   0.00054       4      31 ..     180     210 ..     178     211 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.8
                SSTTTTC CS
         KOW  9 sGphkGk 15
                +Gphk +
  EPX72231.1 33 AGPHKAR 39
                69**966 PP

  == domain 2  score: 19.8 bits;  conditional E-value: 1.5e-07
                 EEEESSSTTTTCEEEEEEEETTT...TEEEE CS
         KOW   4 hVkVvsGphkGktGkVvkvdqhk...vrVfv 31 
                  V+V++G+++G++G++ +++ h    ++++v
  EPX72231.1 180 QVMVTGGRNMGRVGTIIHREHHLgsfEIIHV 210
                 6*****************9998766666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (262 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       442  (0.0246528); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1886.55
//
Query:       EPX72232.1  [L=72]
Description: dolichol-phosphate mannosyltransferase subunit 2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.5e-22   78.5   4.3    3.9e-22   78.3   4.3    1.0  1  DPM2      Dolichol phosphate-mannose biosynthesis regulatory 
     0.0063   16.4   3.4     0.0071   16.3   3.4    1.1  1  PIG-P     PIG-P


Domain annotation for each model (and alignments):
>> DPM2  Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.3   4.3   4.4e-26   3.9e-22      10      75 ..       3      68 ..       1      69 [. 0.93

  Alignments for each domain:
  == domain 1  score: 78.3 bits;  conditional E-value: 4.4e-26
        DPM2 10 llvalllfvYYtiwvillPfvdedhvlhkyflpreyairipvillvvlllfvgtFiglvlikskkk 75
                + + ++ f+YYtiw++++Pfvd+ ++ hk+fl+ e+ai +pv l+++++++vgtFi+lv+iks+++
  EPX72232.1  3 FYLLTAAFIYYTIWILIMPFVDKMNPTHKLFLDCEWAIVVPVSLMLFGICLVGTFISLVMIKSERN 68
                5556788********************************************************975 PP

>> PIG-P  PIG-P
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   3.4     8e-07    0.0071       9      68 ..       2      62 ..       1      71 [. 0.70

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 8e-07
       PIG-P  9 lyllstlafllyllwallPeevlhalgi..tyypnryWalavpayllmlvlyiyvalaslnl 68
                l+ l t af+ y +w l+  +++++++   +++ + +Wa++vp+ l+ + ++ + +++sl +
  EPX72232.1  2 LFYLLTAAFIYYTIWILI-MPFVDKMNPthKLFLDCEWAIVVPVSLMLFGICLVGTFISLVM 62
                6778899********988.4666666542379***********9988554444444444333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       667  (0.0372023); expected 358.6 (0.02)
Passed bias filter:                      291  (0.0162307); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.32u 0.23s 00:00:00.55 Elapsed: 00:00:00.36
# Mc/sec: 593.18
//
Query:       EPX72233.1  [L=195]
Description: meiotic recombination protein Rec6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       982  (0.0547716); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1516.54
//
Query:       EPX72234.1  [L=203]
Description: MBF complex negative regulatory component Yox1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.1e-13   49.0   5.0    4.1e-13   49.0   5.0    2.2  2  Homeodomain  Homeodomain


Domain annotation for each model (and alignments):
>> Homeodomain  Homeodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.0   5.0   2.3e-17   4.1e-13       1      57 []      34      92 ..      34      92 .. 0.97
   2 ?   -0.7   0.1     0.075   1.3e+03      21      42 ..     174     196 ..     173     197 .. 0.79

  Alignments for each domain:
  == domain 1  score: 49.0 bits;  conditional E-value: 2.3e-17
                 ST-SSSS-HHHHHHHHHHHHHSSS-SHHHHHHHHHHH..TS-HHHHHHHHHHHHHHHHH CS
  Homeodomain  1 rrkRttftkeqleeLeklFeenrypsaeereeLAkkl..gLeerqVkvWFqNrRakekk 57
                 +r+R++ t+ +  +Le++F ++++p+  er+eL+k+l   ++ r  ++WFqN+R+  +k
   EPX72234.1 34 KRRRRRTTDAEASILEQYFLKTPKPNLLERQELSKELqsSMSPRELQIWFQNKRQSLRK 92
                 799**********************************999**************98876 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.075
                  HSSS-SHHHHHHHHHHH.TS-HH CS
  Homeodomain  21 enrypsaeereeLAkkl.gLeer 42 
                  e++y s++e ee Ak+l +L++r
   EPX72234.1 174 EDNYSSHKELEECAKSLiELQQR 196
                  57888999999999999777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1039  (0.0579508); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 1335.25
//
Query:       EPX72235.1  [L=1759]
Description: RNA polymerase II large subunit Rpb1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   8.9e-119  396.4   0.0   1.4e-118  395.8   0.0    1.3  1  RNA_pol_Rpb1_1  RNA polymerase Rpb1, domain 1
   3.5e-110  367.6   0.1   5.3e-110  367.0   0.1    1.3  1  RNA_pol_Rpb1_5  RNA polymerase Rpb1, domain 5
    3.4e-77  258.3   0.0    7.4e-77  257.2   0.0    1.6  1  RNA_pol_Rpb1_2  RNA polymerase Rpb1, domain 2
    7.6e-65  218.3   1.1    1.5e-64  217.4   1.1    1.5  1  RNA_pol_Rpb1_6  RNA polymerase Rpb1, domain 6
    1.2e-51  174.2   3.3    2.3e-51  173.4   3.3    1.5  1  RNA_pol_Rpb1_7  RNA polymerase Rpb1, domain 7
      1e-49  168.5   0.0    2.2e-49  167.4   0.0    1.6  1  RNA_pol_Rpb1_3  RNA polymerase Rpb1, domain 3
    6.6e-39  132.2   0.1    1.7e-38  130.9   0.1    1.8  1  RNA_pol_Rpb1_4  RNA polymerase Rpb1, domain 4
    1.8e-11   43.8 358.3       0.54   10.7  16.7   18.0 29  RNA_pol_Rpb1_R  RNA polymerase Rpb1 C-terminal repeat


Domain annotation for each model (and alignments):
>> RNA_pol_Rpb1_1  RNA polymerase Rpb1, domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  395.8   0.0  6.2e-122  1.4e-118       2     312 .]      14     346 ..      13     346 .. 0.99

  Alignments for each domain:
  == domain 1  score: 395.8 bits;  conditional E-value: 6.2e-122
                     E---EEEEEE--HHHHHHH-SBB--STTSTCSTSSSSBBSSSSSSSSS-SSSSSTSTTTSSTTTT-----EEEEEECEEE-HHHHHHHHHHCTTC CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  RNA_pol_Rpb1_1   2 kkikeiqfgiaspeeirkwSvvevtkaetieekslkPeegGllDerlgtidkdleCetCgkkkkeCeghfGhieLakPvfhigffklilkilecv 96 
                     ++++e+qfgi+speeir++Sv++++ +et++e+ ++P+ gGllD+rlgtid++++C+tCg+  +eC+ghfGhieLakPvfhigf+++i+kilecv
      EPX72235.1  14 RRVEEVQFGILSPEEIRSMSVAKIEFPETMDETGQRPRVGGLLDPRLGTIDRQFKCQTCGELIAECPGHFGHIELAKPVFHIGFLSKIKKILECV 108
                     689******************************************************************************************** PP

                     ETTTTEBSS-TTSH....HHHHHHCSSSCCCCHHHHHHHHCCS-BE-......................SSSSB-EEEEEETTEEEEEESSSST. CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......................xxxxxxxxxxxxxxxxxxxxxxxxx. RF
  RNA_pol_Rpb1_1  97 ckecskllldeekkkllsklkkrekleelkkrlkaieelckkinlce......................kCgavqpkleeegeklkaalkkske. 168
                     c +c+kl +d+++     k ++++++++ k+rl+a++++ck++++c+                      +Cg +qp+++++g kl  ++kk k+ 
      EPX72235.1 109 CWNCGKLKIDPSNP----KYQETQRYRDPKNRLNAVWNVCKTKMVCDtglsggsdnfdpsnptanlghgGCGSAQPTIRKDGLKLWGSWKKGKDe 199
                     ************99....99999999*****************************************************************9998 PP

                     ...SCEEEE-HHHHHHHHHCSTHHHHHHTTSBTTTB-GGGCCECCEEE--GGGS-BEESSSSSEEBECCCCHHHHHHHHHHHHHHHHHSSSSSTC CS
                     ...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  RNA_pol_Rpb1_1 169 ...eekeklsaekvkkllkriededvevlgfkssgsrPewliltvlPVpPpeiRPsvqldggrrsedDlteklrdiikrNnrLkkaeeegapeli 260
                         ek+ l++ +v++++++i+++d+e lg++++++rP+w+i+tvlPVpPp++RPs+++dg++r+edDlt+kl+diik+N +++++e+egap++i
      EPX72235.1 200 sdlPEKRLLTPLEVHTIFTHISSDDLERLGLNEQYARPDWMIITVLPVPPPSVRPSISVDGTSRGEDDLTHKLSDIIKANANVRRCEQEGAPAHI 294
                     999999***************************************************************************************** PP

                     HHHHHHHHHHHHHHCC-TTSSSSSEEBSTTSSS--THHHHHTSSSSCCCCCT CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  RNA_pol_Rpb1_1 261 ieeekelLQehvatlfdneisglkpatqkskrplkslsqrLkGKeGrfRgnL 312
                     ++e ++lLQ+hvat++dnei+g+++a qks+rplks+++rLkGKeGr+RgnL
      EPX72235.1 295 VSEYEQLLQFHVATYMDNEIAGQPQALQKSGRPLKSIRARLKGKEGRLRGNL 346
                     ***************************************************9 PP

>> RNA_pol_Rpb1_5  RNA polymerase Rpb1, domain 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  367.0   0.1  2.4e-113  5.3e-110       1     266 [.     813    1402 ..     813    1403 .. 0.99

  Alignments for each domain:
  == domain 1  score: 367.0 bits;  conditional E-value: 2.4e-113
                      B--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEETTSEEEETTS-EEESSGGGTS........................... CS
                      xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........................... RF
  RNA_pol_Rpb1_5    1 GLkvkefffhtmggReGLiDtAvkTaesGYlqRrlvkaledvvvkyddtvrnsggeivqflygedg........................... 66  
                      GL+++efffh+m+gReGLiDtAvkTae+GY+qRrlvka+edv+v+yd+tvrn+ g+i+qf+ygedg                           
      EPX72235.1  813 GLTPQEFFFHAMAGREGLIDTAVKTAETGYIQRRLVKAMEDVMVRYDGTVRNAMGDIIQFAYGEDGldatlveyqvfdslrlsneqferkyki 905 
                      9******************************************************************************************** PP

                      ............................................................................................. CS
                      ............................................................................................. RF
  RNA_pol_Rpb1_5   67 ............................................................................................. 66  
                                                                                                                   
      EPX72235.1  906 dlmedrsisqfmensidndpdvqdlldaefaqlsndrdllcnfifpkgdarwpmpvnvqriiqnacqifhlesrkpsdllpgdiiqglnelin 998 
                      ********************************************************************************************* PP

                      .............................................................B--TT-BHHHHHHHHHHHHHHCCCSSTTSSTC CS
                      .............................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  RNA_pol_Rpb1_5   67 .............................................................lvepGeavGiiaaQSiGePgTQltlnTFHfaG 98  
                                                                                   +v+pGe+vG++aaQSiGeP+TQ+tlnTFH+aG
      EPX72235.1  999 klkifrgddritqdvqnnatllfqihlrskfavkrviteyhlnkvafewimgevesrfqqaVVSPGEMVGTLAAQSIGEPATQMTLNTFHYAG 1091
                      ********************************************************************************************* PP

                      SSTSSSSSSHHHHHHHHTT-SS-SS-EEEEEB-SSSSSCHHHCHHHHHHHSE......................................... CS
                      xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......................................... RF
  RNA_pol_Rpb1_5   99 vasknvtlGvprlkeilnvskniksksltvllvdeeakelekakkvkkaiek......................................... 150 
                      v+sknvtlGvprlkeilnv+knik++slt++l+++ +++++ ak+++++ie+                                         
      EPX72235.1 1092 VSSKNVTLGVPRLKEILNVAKNIKTPSLTIYLLPHISSNMDLAKNIQTQIEHttlstvtsateihydpdpqntvieedkdfveaffaipdeev 1184
                      ********************************************************************************************* PP

                      ............................................................................................. CS
                      ............................................................................................. RF
  RNA_pol_Rpb1_5  151 ............................................................................................. 150 
                                                                                                                   
      EPX72235.1 1185 eenlwkqspwllrleldrakmldkklsmsdvagkiaesferdlftiwsednadklvircriirdddrkteeddnlieedvflktieghmlesi 1277
                      ********************************************************************************************* PP

                      ...CBTTEEEEEEEEEEEEEEET.......EEEEEEECS--HHHHTTSTTTBETTTEEESSHHHHHHHHCHHHHHHHHHHHHHHHHHHTTS-- CS
                      ...xxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  RNA_pol_Rpb1_5  151 ...gikkikrilvkeaekgkeee.......kelvletegvnlsevlkveevvdageilsndiaeileilgieaarkallkeiqevykvqgvsv 233 
                         g+++i+r++++e++  ++++       +e+vlet+g+nl+e++ ve+ vd ++i+sn++ eil+ilgiea+r+allke+++v++++g++v
      EPX72235.1 1278 slrGVPNITRVYMMEHKVIRQKDagifergDEWVLETDGINLTEAMAVEG-VDSSRIYSNSFVEILQILGIEATRSALLKELRNVIEFDGSYV 1369
                      *****************77777779*************************.****************************************** PP

                      -HHHHHHHHHHHTTTSS---SSTTCHCCSSSHH CS
                      xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  RNA_pol_Rpb1_5  234 ndrHlelivdqmtkkgeivavnrsGinkaelsa 266 
                      n+rHl+l++d+mt +g+++a++r+Gin+ae++a
      EPX72235.1 1370 NYRHLALLCDVMTSRGHLMAITRHGINRAETGA 1402
                      *****************************9975 PP

>> RNA_pol_Rpb1_2  RNA polymerase Rpb1, domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  257.2   0.0   3.3e-80   7.4e-77       1     166 []     348     513 ..     348     513 .. 0.99

  Alignments for each domain:
  == domain 1  score: 257.2 bits;  conditional E-value: 3.3e-80
                     SEEESSEEEEEEEEESSS-TTEEEEEHHHHTTSEEEEE-STTTHHHHHHHHHHTTTSSSSEEEEESTTSSEEETTTT-SCHHCCTTTTSEEEEE- CS
  RNA_pol_Rpb1_2   1 GkrvdysaRsvispdpnlkldevgvPisvakkltvpeivtelnikklrklvengpevyPgasyvkredgsekklkakkrklakelekgdiverhv 95 
                     Gkrvd+saR+vi++dpnl+lde+gvP s+ak+lt+pe+vt++ni  l++lv+ngp+++Pga+y++r++g++ +l+++kr+ +  l++g++verh+
      EPX72235.1 348 GKRVDFSARTVITGDPNLSLDELGVPRSIAKTLTYPETVTPYNIYYLQELVRNGPDEHPGAKYIIRDTGERIDLRYHKRAGDIPLRYGWRVERHI 442
                     9********************************************************************************************** PP

                     -TTSEEEEE-SSTTSGGGEEEEEEEEESSSSEEEEGGGHCCCT--SSS-EEEEE--SSHHHHHHHHHCSBT CS
  RNA_pol_Rpb1_2  96 kdgdvvllNRqPsLhklsimahrvkvlekktlrlnlsvttayNaDFDGDemnlhlpqseearaEaeelllv 166
                     +dgd+v++NRqPsLhk+s+m+hr++v++++t+rlnlsvt++yNaDFDGDemn+h+pqsee+raE++e+++v
      EPX72235.1 443 RDGDIVIFNRQPSLHKMSMMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSEETRAEIQEIAMV 513
                     ********************************************************************986 PP

>> RNA_pol_Rpb1_6  RNA polymerase Rpb1, domain 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  217.4   1.1   6.7e-68   1.5e-64       1     191 []     879    1059 ..     879    1059 .. 0.95

  Alignments for each domain:
  == domain 1  score: 217.4 bits;  conditional E-value: 6.7e-68
                      B-GGGEEEEE-TTSSS-HHHHHHHH---TTSSSSS--TTTSSSHH..HHTT-TTHHHHHHHHHHHHHHHHHHHHHTT-T..T---EEE..EES CS
  RNA_pol_Rpb1_6    1 ldgafiEkQkidllklsdekfekkYkldlddekkselkelleeevveeiredaelqelldeEyeqLkedRellrkeifpdeekdekvklqLPv 93  
                      ld++ +E Q +d+l+ls+e+fe+kYk+dl+++++  +++++e+++    ++d+++q+lld+E+ qL +dR+ll++ ifp  ++d++++  +Pv
      EPX72235.1  879 LDATLVEYQVFDSLRLSNEQFERKYKIDLMEDRS--ISQFMENSI----DNDPDVQDLLDAEFAQLSNDRDLLCNFIFP--KGDARWP--MPV 961 
                      8****************************97444..445666555....9*****************************..889***9..*** PP

                      -HHHHHHHHHHHTT--SSS-B---HHHHHHHHHHHHTT--SS-SSSHHHHHHHHHTTTHHHHHHHHTS-HHHHHHTS---HHHHHHHHHHHHH CS
  RNA_pol_Rpb1_6   94 NikRlienaqkefkidkrkesdlspveviekvkelldklvvvrgddklskeaqenatllfkillrstLasKrvleeyrLskeaFdwllgeies 186 
                      N++R+i+na ++f++++rk+sdl p ++i+ ++el++kl ++rgdd+++++ q+natllf+i+lrs++a Krv++ey+L+k aF+w++ge+es
      EPX72235.1  962 NVQRIIQNACQIFHLESRKPSDLLPGDIIQGLNELINKLKIFRGDDRITQDVQNNATLLFQIHLRSKFAVKRVITEYHLNKVAFEWIMGEVES 1054
                      ********************************************************************************************* PP

                      HHHHH CS
  RNA_pol_Rpb1_6  187 rFkka 191 
                      rF++a
      EPX72235.1 1055 RFQQA 1059
                      ***97 PP

>> RNA_pol_Rpb1_7  RNA polymerase Rpb1, domain 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  173.4   3.3     1e-54   2.3e-51       1     135 []    1144    1280 ..    1144    1280 .. 0.98

  Alignments for each domain:
  == domain 1  score: 173.4 bits;  conditional E-value: 1e-54
                      EEGGGTEEEEEEEB---TTS-SSGGGGHHHHTTS---------..----SBEEEEEE-SHHHHHTT--HHHHHHHHHHHHTTTEEEEE--TTS CS
  RNA_pol_Rpb1_7    1 ttLrkvtaateiyYDPdprntvieeDrefveeyyelpdedvek..srlspWlLRieLdrkkmtdkkltmeevaekikeefkndlkvifsddna 91  
                      ttL++vt+atei YDPdp+ntvieeD++fve+++++pde+ve+   ++spWlLR+eLdr+km+dkkl+m++va ki e+f++dl+ i+s+dna
      EPX72235.1 1144 TTLSTVTSATEIHYDPDPQNTVIEEDKDFVEAFFAIPDEEVEEnlWKQSPWLLRLELDRAKMLDKKLSMSDVAGKIAESFERDLFTIWSEDNA 1236
                      9****************************************955899********************************************** PP

                      SSEEEEEEE------------..--HHHHTTHHHHHHHSS-EEE CS
  RNA_pol_Rpb1_7   92 eklvlririvkeekekeeeqedkaeddkfLkklesnllssltLr 135 
                      +klv+r+ri++++++k ee+++ +e+d+fLk +e ++l+s++Lr
      EPX72235.1 1237 DKLVIRCRIIRDDDRKTEEDDNLIEEDVFLKTIEGHMLESISLR 1280
                      ***********99999999999********************98 PP

>> RNA_pol_Rpb1_3  RNA polymerase Rpb1, domain 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  167.4   0.0   9.7e-53   2.2e-49       1     157 []     516     675 ..     516     675 .. 0.96

  Alignments for each domain:
  == domain 1  score: 167.4 bits;  conditional E-value: 9.7e-53
                     CSEETTTTEESSS--THHHHHHHHHSSTTEEEEHHHHHHHHHHSSSCCSSSSSSSSSBESSSEBEEHHHHHHCCCHCCCCEEEESSSS......S CS
  RNA_pol_Rpb1_3   1 nilspqsgkPvigivQDsllGvyllTkedvfidreeaqqllykgvgsdsktvtlrpailkpkelwtgkqtfsrilpneinyerkneek......d 89 
                     +i+spqs+kPv+givQD+l Gv++++ +d f++re +++++ ++ g+d   v ++p i+kp++lwtgkq++s+++p+ in+ r+ +++      d
      EPX72235.1 516 QIVSPQSNKPVMGIVQDTLAGVRKFSLRDNFLSREAVMNIMLWVPGWDG--VVPPPVIVKPRPLWTGKQILSLVIPKGINLMREDDKQgmlnpsD 608
                     79*********************************************85..5999999999**********************744448899999 PP

                     TSEEECSSEEEES--SHHHHSSSSTTSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCEB-TGGGG CS
  RNA_pol_Rpb1_3  90 gkvlikngelikGvidkkvvgkksqgslihvlakeygiketvrfldslqrlgfkyllqsgftigigDt 157
                       +li+nge+i Gv+dkk+vg +sqg+l+h+++ke g++ ++ f++ +qr+++++ll++gf+igigDt
      EPX72235.1 609 LGMLIENGEIIYGVVDKKTVG-ASQGGLVHTIWKEKGPDTCKGFFNGIQRVVNYWLLHNGFSIGIGDT 675
                     *********************.9********************************************7 PP

>> RNA_pol_Rpb1_4  RNA polymerase Rpb1, domain 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.9   0.1   7.4e-42   1.7e-38       2     108 .]     701     806 ..     700     806 .. 0.97

  Alignments for each domain:
  == domain 1  score: 130.9 bits;  conditional E-value: 7.4e-42
                     HHHCTHTCCHHHTTHCHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTTSHHHHHHHCTSSS-HHHHHHHHTB-EEEEBTTBSS--SSTSCSSTTSS CS
  RNA_pol_Rpb1_4   2 eeaerygkledlpgksleelfeakinkilnkardkagkiaskslaasNsiliMvksGaKGsiinisqiagclGqqnvegkripkgfsgrtlphfk 96 
                     ++a++ ++l+++pg++l+e+fea+++ iln+ard+ag++a+ sl++sN++++Mv +G+KGs+inisq+++c+Gqq vegkrip+gf++rtlphf 
      EPX72235.1 701 QDAQH-NRLKPEPGMTLRESFEAQVSRILNQARDNAGRSAEHSLKNSNNVKQMVAAGSKGSFINISQMSACVGQQIVEGKRIPFGFKHRTLPHFP 794
                     66777.9**************************************88************************************************ PP

                     SSESSTTTSSEE CS
  RNA_pol_Rpb1_4  97 kidespesrGFv 108
                     k+d+spesrGF+
      EPX72235.1 795 KDDDSPESRGFI 806
                     ***********8 PP

>> RNA_pol_Rpb1_R  RNA polymerase Rpb1 C-terminal repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.1       4.4   9.8e+03       7      12 ..     478     483 ..     477     483 .. 0.82
   2 ?    5.0   0.5     0.016        36       3      14 .]    1528    1539 ..    1527    1539 .. 0.95
   3 ?    5.5   6.5     0.011        24       1      14 []    1545    1558 ..    1540    1558 .. 0.95
   4 !    7.6  11.3    0.0023       5.2       3      14 .]    1554    1565 ..    1554    1565 .. 0.98
   5 ?  -12.9  33.1         8   1.8e+04       2      14 .]    1573    1585 ..    1559    1585 .. 0.93
   6 !   10.7  16.7   0.00024      0.54       1      14 []    1586    1599 ..    1586    1599 .. 0.98
   7 !   10.7  16.7   0.00025      0.56       1      14 []    1593    1606 ..    1593    1606 .. 0.98
   8 !   10.7  16.7   0.00024      0.55       1      14 []    1600    1613 ..    1600    1613 .. 0.98
   9 !   10.6  16.8   0.00027       0.6       1      14 []    1607    1620 ..    1607    1620 .. 0.98
  10 !   10.6  16.8   0.00027       0.6       1      14 []    1614    1627 ..    1614    1627 .. 0.98
  11 !   10.6  16.8   0.00026      0.59       1      14 []    1621    1634 ..    1621    1634 .. 0.98
  12 !   10.6  16.7   0.00026      0.57       1      14 []    1628    1641 ..    1628    1641 .. 0.98
  13 !   10.6  16.8   0.00027      0.61       1      14 []    1635    1648 ..    1635    1648 .. 0.98
  14 !   10.6  16.8   0.00027      0.61       1      14 []    1642    1655 ..    1642    1655 .. 0.98
  15 !   10.5  16.9   0.00028      0.63       1      14 []    1649    1662 ..    1649    1662 .. 0.98
  16 !   10.6  16.8   0.00027      0.61       1      14 []    1656    1669 ..    1656    1669 .. 0.98
  17 !   10.6  16.7   0.00026      0.57       1      14 []    1663    1676 ..    1663    1676 .. 0.98
  18 !   10.6  16.7   0.00026      0.58       1      14 []    1670    1683 ..    1670    1683 .. 0.98
  19 !   10.6  16.8   0.00026      0.59       1      14 []    1677    1690 ..    1677    1690 .. 0.98
  20 !   10.7  16.7   0.00025      0.56       1      14 []    1684    1697 ..    1684    1697 .. 0.98
  21 !   10.6  16.8   0.00027       0.6       1      14 []    1691    1704 ..    1691    1704 .. 0.98
  22 !   10.6  16.8   0.00027       0.6       1      14 []    1698    1711 ..    1698    1711 .. 0.98
  23 !   10.5  16.9   0.00028      0.63       1      14 []    1705    1718 ..    1705    1718 .. 0.98
  24 !   10.5  16.8   0.00028      0.62       1      14 []    1712    1725 ..    1712    1725 .. 0.98
  25 !   10.5  16.9   0.00028      0.63       1      14 []    1719    1732 ..    1719    1732 .. 0.98
  26 !   10.5  16.9   0.00028      0.62       1      14 []    1726    1739 ..    1726    1739 .. 0.98
  27 !   10.5  16.9   0.00028      0.62       1      14 []    1733    1746 ..    1733    1746 .. 0.98
  28 !   10.7  16.7   0.00025      0.56       1      14 []    1740    1753 ..    1740    1753 .. 0.98
  29 ?    5.4   7.9     0.012        26       1      10 [.    1747    1756 ..    1747    1756 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 4.4
  RNA_pol_Rpb1_R   7 ySPtSP 12 
                     +S tSP
      EPX72235.1 478 LSVTSP 483
                     799999 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.016
  RNA_pol_Rpb1_R    3 TSPaySPtSPgY 14  
                      +SP +S  SPgY
      EPX72235.1 1528 ASPFHSVKSPGY 1539
                      7**********9 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.011
  RNA_pol_Rpb1_R    1 SPTSPaySPtSPgY 14  
                      S+ SP+y+ tSP+Y
      EPX72235.1 1545 SAMSPGYGLTSPSY 1558
                      789**********9 PP

  == domain 4  score: 7.6 bits;  conditional E-value: 0.0023
  RNA_pol_Rpb1_R    3 TSPaySPtSPgY 14  
                      TSP+ySP+SPgY
      EPX72235.1 1554 TSPSYSPSSPGY 1565
                      9**********9 PP

  == domain 5  score: -12.9 bits;  conditional E-value: 8
  RNA_pol_Rpb1_R    2 PTSPaySPtSPgY 14  
                      P SP+ySPtSP+Y
      EPX72235.1 1573 PSSPSYSPTSPSY 1585
                      8899********9 PP

  == domain 6  score: 10.7 bits;  conditional E-value: 0.00024
  RNA_pol_Rpb1_R    1 SPTSPaySPtSPgY 14  
                      SPTSP+ySPtSP+Y
      EPX72235.1 1586 SPTSPSYSPTSPSY 1599
                      9************9 PP

  == domain 7  score: 10.7 bits;  conditional E-value: 0.00025
  RNA_pol_Rpb1_R    1 SPTSPaySPtSPgY 14  
                      SPTSP+ySPtSP+Y
      EPX72235.1 1593 SPTSPSYSPTSPSY 1606
                      9************9 PP

  == domain 8  score: 10.7 bits;  conditional E-value: 0.00024
  RNA_pol_Rpb1_R    1 SPTSPaySPtSPgY 14  
                      SPTSP+ySPtSP+Y
      EPX72235.1 1600 SPTSPSYSPTSPSY 1613
                      9************9 PP

  == domain 9  score: 10.6 bits;  conditional E-value: 0.00027
  RNA_pol_Rpb1_R    1 SPTSPaySPtSPgY 14  
                      SPTSP+ySPtSP+Y
      EPX72235.1 1607 SPTSPSYSPTSPSY 1620
                      9************9 PP

  == domain 10  score: 10.6 bits;  conditional E-value: 0.00027
  RNA_pol_Rpb1_R    1 SPTSPaySPtSPgY 14  
                      SPTSP+ySPtSP+Y
      EPX72235.1 1614 SPTSPSYSPTSPSY 1627
                      9************9 PP

  == domain 11  score: 10.6 bits;  conditional E-value: 0.00026
  RNA_pol_Rpb1_R    1 SPTSPaySPtSPgY 14  
                      SPTSP+ySPtSP+Y
      EPX72235.1 1621 SPTSPSYSPTSPSY 1634
                      9************9 PP

  == domain 12  score: 10.6 bits;  conditional E-value: 0.00026
  RNA_pol_Rpb1_R    1 SPTSPaySPtSPgY 14  
                      SPTSP+ySPtSP+Y
      EPX72235.1 1628 SPTSPSYSPTSPSY 1641
                      9************9 PP

  == domain 13  score: 10.6 bits;  conditional E-value: 0.00027
  RNA_pol_Rpb1_R    1 SPTSPaySPtSPgY 14  
                      SPTSP+ySPtSP+Y
      EPX72235.1 1635 SPTSPSYSPTSPSY 1648
                      9************9 PP

  == domain 14  score: 10.6 bits;  conditional E-value: 0.00027
  RNA_pol_Rpb1_R    1 SPTSPaySPtSPgY 14  
                      SPTSP+ySPtSP+Y
      EPX72235.1 1642 SPTSPSYSPTSPSY 1655
                      9************9 PP

  == domain 15  score: 10.5 bits;  conditional E-value: 0.00028
  RNA_pol_Rpb1_R    1 SPTSPaySPtSPgY 14  
                      SPTSP+ySPtSP+Y
      EPX72235.1 1649 SPTSPSYSPTSPSY 1662
                      9************9 PP

  == domain 16  score: 10.6 bits;  conditional E-value: 0.00027
  RNA_pol_Rpb1_R    1 SPTSPaySPtSPgY 14  
                      SPTSP+ySPtSP+Y
      EPX72235.1 1656 SPTSPSYSPTSPSY 1669
                      9************9 PP

  == domain 17  score: 10.6 bits;  conditional E-value: 0.00026
  RNA_pol_Rpb1_R    1 SPTSPaySPtSPgY 14  
                      SPTSP+ySPtSP+Y
      EPX72235.1 1663 SPTSPSYSPTSPSY 1676
                      9************9 PP

  == domain 18  score: 10.6 bits;  conditional E-value: 0.00026
  RNA_pol_Rpb1_R    1 SPTSPaySPtSPgY 14  
                      SPTSP+ySPtSP+Y
      EPX72235.1 1670 SPTSPSYSPTSPSY 1683
                      9************9 PP

  == domain 19  score: 10.6 bits;  conditional E-value: 0.00026
  RNA_pol_Rpb1_R    1 SPTSPaySPtSPgY 14  
                      SPTSP+ySPtSP+Y
      EPX72235.1 1677 SPTSPSYSPTSPSY 1690
                      9************9 PP

  == domain 20  score: 10.7 bits;  conditional E-value: 0.00025
  RNA_pol_Rpb1_R    1 SPTSPaySPtSPgY 14  
                      SPTSP+ySPtSP+Y
      EPX72235.1 1684 SPTSPSYSPTSPSY 1697
                      9************9 PP

  == domain 21  score: 10.6 bits;  conditional E-value: 0.00027
  RNA_pol_Rpb1_R    1 SPTSPaySPtSPgY 14  
                      SPTSP+ySPtSP+Y
      EPX72235.1 1691 SPTSPSYSPTSPSY 1704
                      9************9 PP

  == domain 22  score: 10.6 bits;  conditional E-value: 0.00027
  RNA_pol_Rpb1_R    1 SPTSPaySPtSPgY 14  
                      SPTSP+ySPtSP+Y
      EPX72235.1 1698 SPTSPSYSPTSPSY 1711
                      9************9 PP

  == domain 23  score: 10.5 bits;  conditional E-value: 0.00028
  RNA_pol_Rpb1_R    1 SPTSPaySPtSPgY 14  
                      SPTSP+ySPtSP+Y
      EPX72235.1 1705 SPTSPSYSPTSPSY 1718
                      9************9 PP

  == domain 24  score: 10.5 bits;  conditional E-value: 0.00028
  RNA_pol_Rpb1_R    1 SPTSPaySPtSPgY 14  
                      SPTSP+ySPtSP+Y
      EPX72235.1 1712 SPTSPSYSPTSPSY 1725
                      9************9 PP

  == domain 25  score: 10.5 bits;  conditional E-value: 0.00028
  RNA_pol_Rpb1_R    1 SPTSPaySPtSPgY 14  
                      SPTSP+ySPtSP+Y
      EPX72235.1 1719 SPTSPSYSPTSPSY 1732
                      9************9 PP

  == domain 26  score: 10.5 bits;  conditional E-value: 0.00028
  RNA_pol_Rpb1_R    1 SPTSPaySPtSPgY 14  
                      SPTSP+ySPtSP+Y
      EPX72235.1 1726 SPTSPSYSPTSPSY 1739
                      9************9 PP

  == domain 27  score: 10.5 bits;  conditional E-value: 0.00028
  RNA_pol_Rpb1_R    1 SPTSPaySPtSPgY 14  
                      SPTSP+ySPtSP+Y
      EPX72235.1 1733 SPTSPSYSPTSPSY 1746
                      9************9 PP

  == domain 28  score: 10.7 bits;  conditional E-value: 0.00025
  RNA_pol_Rpb1_R    1 SPTSPaySPtSPgY 14  
                      SPTSP+ySPtSP+Y
      EPX72235.1 1740 SPTSPSYSPTSPSY 1753
                      9************9 PP

  == domain 29  score: 5.4 bits;  conditional E-value: 0.012
  RNA_pol_Rpb1_R    1 SPTSPaySPt 10  
                      SPTSP+ySP+
      EPX72235.1 1747 SPTSPSYSPS 1756
                      9********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1759 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       489  (0.0272742); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 1.15u 0.32s 00:00:01.47 Elapsed: 00:00:00.54
# Mc/sec: 9829.90
//
Query:       EPX72236.1  [L=312]
Description: HMG box protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-16   61.2   2.4    3.7e-16   59.5   2.4    2.0  1  HMG_box_2  HMG-box domain
    2.5e-14   53.4   2.2      5e-14   52.5   2.2    1.6  1  HMG_box    HMG (high mobility group) box
  ------ inclusion threshold ------
      0.011   15.3   1.4      0.022   14.2   1.4    1.4  1  TryThrA_C  Tryptophan-Threonine-rich plasmodium antigen C ter
      0.013   15.4   0.4      0.013   15.4   0.4    2.1  2  HMG_box_5  HMG (high mobility group) box 5


Domain annotation for each model (and alignments):
>> HMG_box_2  HMG-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.5   2.4   8.3e-20   3.7e-16       1      71 [.     114     185 ..     114     187 .. 0.96

  Alignments for each domain:
  == domain 1  score: 59.5 bits;  conditional E-value: 8.3e-20
                 ---.-SS--HHHHHHHTTHHHHHHH.T---SSHHHHTGGGHHHHHHS-HHHHHHHHHHHHHHHHHHHH-SS- CS
   HMG_box_2   1 pkkpkaarnAYalfvqemipelkrk.GnpviglaevsklcsekWkalseeeKekYeekAkedkkrydrealt 71 
                 p +pk+++ AY+lf ++++ e+k + G++ + ++ev k+++ekW +l+e+e++++e++A ++++ yd+e++ 
  EPX72236.1 114 PAQPKRPPTAYNLFQKNQRSEIKDSlGEKGNDVKEVNKAMHEKWTSLNENERKPFEDEAAKLRETYDAEMTA 185
                 678**********************9999*****************************************85 PP

>> HMG_box  HMG (high mobility group) box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.5   2.2   1.1e-17     5e-14       1      68 [.     117     186 ..     117     187 .. 0.95

  Alignments for each domain:
  == domain 1  score: 52.5 bits;  conditional E-value: 1.1e-17
                 --SS--HHHHHHHHHHHHHHHHSTTS-..HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     HMG_box   1 pkRplsafflfskeqraklkaenPelk..naeiskklgekWkalseeeKkkYeekaekekaryekekpey 68 
                 pkRp++a++lf k qr ++k    e    ++e++k + ekW +l+e e+k++e++a+k++++y++e+ ++
  EPX72236.1 117 PKRPPTAYNLFQKNQRSEIKDSLGEKGndVKEVNKAMHEKWTSLNENERKPFEDEAAKLRETYDAEMTAF 186
                 8********************998766559*************************************987 PP

>> TryThrA_C  Tryptophan-Threonine-rich plasmodium antigen C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   1.4     5e-06     0.022      13      71 ..     124     182 ..     121     192 .. 0.91

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 5e-06
   TryThrA_C  13 WekFneslenekkkwlekkekeweewlkeienKWlhynekldeeyksdilkksskwdee 71 
                 ++ F+++ ++e k+ l +k ++ +e  k +++KW++ ne+  + ++++  k  +++d e
  EPX72236.1 124 YNLFQKNQRSEIKDSLGEKGNDVKEVNKAMHEKWTSLNENERKPFEDEAAKLRETYDAE 182
                 7889999****************************************999998888765 PP

>> HMG_box_5  HMG (high mobility group) box 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   0.4   2.9e-06     0.013       4      78 ..     117     194 ..     112     199 .. 0.86
   2 ?   -1.6   0.2      0.59   2.6e+03      57      80 ..     288     311 ..     285     312 .] 0.66

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 2.9e-06
   HMG_box_5   4 pespktaeeiwq...qsvigdylarfkndrakalkameatwsnmekkekimwikkaaedqkryerelsemrsaaaata 78 
                 p+ p ta +++q   +s i d l    nd     kam   w+ ++  e+  +   aa+ +  y+ e++ ++++  +++
  EPX72236.1 117 PKRPPTAYNLFQknqRSEIKDSLGEKGNDVKEVNKAMHEKWTSLNENERKPFEDEAAKLRETYDAEMTAFQASRESAS 194
                 667778888875222699************************************************999988766655 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.59
   HMG_box_5  57 aedqkryerelsemrsaaaatasg 80 
                   d+k+  +   +   a++ata++
  EPX72236.1 288 KRDKKKRRKSSVNTNNAPTATAAS 311
                 456666666667777778887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (312 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1757  (0.0979977); expected 358.6 (0.02)
Passed bias filter:                      476  (0.0265492); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.69u 0.32s 00:00:01.01 Elapsed: 00:00:00.48
# Mc/sec: 1952.27
//
Query:       EPX72237.1  [L=565]
Description: SAGA complex subunit Ngg1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.2e-32  111.1   6.5    9.3e-32  109.9   6.5    1.6  1  Ada3      Histone acetyltransferases subunit 3


Domain annotation for each model (and alignments):
>> Ada3  Histone acetyltransferases subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.9   6.5   5.2e-36   9.3e-32       2     131 ..     387     508 ..     386     509 .. 0.84

  Alignments for each domain:
  == domain 1  score: 109.9 bits;  conditional E-value: 5.2e-36
        Ada3   2 dyaqleeRlkqELreiGilepeedadkydgredDevaaeLrrlqaeLrevsliNgarkarLlelvkermayqeyqtiledlDkqvqqaYlKrtrtlkkk 100
                 d++  eeRl++ Lr  G++  ++d  ++++r+dD+++++Lr+lq +L++v + N++rk+++lel+ e+ma+qe++ +l+dlDkq+++aY+Kr+rtlk k
  EPX72237.1 387 DFSFYEERLRNRLRSFGVI-YDDDI-DWTKRQDDQISETLRSLQCRLKRVEEENQQRKQKILELLPEEMAFQEFSAVLDDLDKQIENAYMKRNRTLKVK 483
                 78889**************.34444.59*********************************************************************** PP

        Ada3 101 kkkkrsgaaaaaaaagaarpgigdalralme 131
                 kk+  +++        a+     + +++lm+
  EPX72237.1 484 KKRIVNEK-----I-NASATSSYATIKSLMD 508
                 ***54432.....2.2222233455666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (565 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1301  (0.072564); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.27s 00:00:00.88 Elapsed: 00:00:00.45
# Mc/sec: 3755.33
//
Query:       EPX72238.1  [L=395]
Description: transcription factor TFIIA complex large subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-63  215.3  16.9    8.4e-62  210.5  16.9    2.4  1  TFIIA     Transcription factor IIA, alpha/beta subunit


Domain annotation for each model (and alignments):
>> TFIIA  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  210.5  16.9   4.7e-66   8.4e-62       1     415 []      30     394 ..      30     394 .. 0.58

  Alignments for each domain:
  == domain 1  score: 210.5 bits;  conditional E-value: 4.7e-66
       TFIIA   1 vYrsvIedVIesvredFeeeGvdeqvLeeLkqlWesKllqskaaefpwdpkpeeaqspqfvlqlpqslkqalqasaaaasqapastsqslpslvipagk 99 
                 vY++vI dVI+++r+dFee+Gvde++L+eL++lW+ Kl+++++a+fpw ++p  a +  + ++    l++ + + aa   +a a +++s     i+a +
  EPX72238.1  30 VYQHVILDVIANSRTDFEENGVDEATLQELQNLWQGKLVATNVATFPWAQAPVGAFPIGQLFDPVTGLRTDSLDVAA---AAAAGATNSPILNNIAAIR 125
                 8****************************************************************999999986666...2223333333333444444 PP

       TFIIA 100 svqslt.anssaataatfslpakleppvqipagvtlqtasgqlykvnvqasgaqqiaaqplqqvvqq..sqgsaaqssvaalqaqsqqaqalaepqqql 195
                  vq++    ++         p   +p     ag+++ t+       +++ s+ + i  +++++ + +  ++ s +  s++++++ ++++++ ++p + +
  EPX72238.1 126 AVQQMDsLAQQ----HG-GSPFYPSP---SSAGLNQTTQPDA----STEGSSLSDIP-NNINTPFTSfnKNTSLQLPSNPNSDNPPNNLSSSVMPPSSD 211
                 44444422222....22.22222223...3445555555522....12334444443.44444433321222222222222222233333333333331 PP

       TFIIA 196 ekqqqqqqqqqqqqqqqqvqqqqqe.esqqaqqasqeqvag.sqvessqtdgaedaleeespvlegelsaeeeagaqkeelsreeidrireealkakel 292
                     + + q ++  +++++       +++ ++++     ++ +q+ +s++++++d  ++     +g l++ ++++             i    ++++++
  EPX72238.1 212 ----RAVPQDPNLSNNNAFGGLLLPnQNSVKNES----PESlQQPGPSEQSEKQDIPQS-----DGTLLEDDTEEH------------I---ISENSKY 282
                 ....123333333333322222211111111111....111122333333333333333.....333333332221............1...1111111 PP

       TFIIA 293 ekeskkkkraee.ssladlseilqlDGagddsdeeeeeeesdedsdsessddedeqveEDplNSd.DDvddeddddlfdtdn....vivCqYDKvhRsK 385
                 e ++ +   +++ +++ + +++lq+DG+ dd++e e +++s   +             ++++NSd DD+d++++++ +++++    +++C+YDKv+++K
  EPX72238.1 283 ELAHDA---DKRiKEMLANNRVLQIDGTFDDNEE-E-KKTS-PGTP-----------SDEAINSDlDDPDSDEAPEADEGSDvgqaIVLCLYDKVNHHK 364
                 111111...111123334568**********999.2.2222.2334...........389****************999999***************** PP

       TFIIA 386 NKWKftLKDGvmtvnGkdYVFsKAiGeaEW 415
                 NKWK++++DG++ vnGkdY+F KA+Ge+EW
  EPX72238.1 365 NKWKCVFRDGIVGVNGKDYLFFKANGEFEW 394
                 ****************************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (395 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       594  (0.0331307); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2824.94
//
Query:       EPX72239.1  [L=715]
Description: HRD ubiquitin ligase complex subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.6e-18   65.6  23.9      0.002   18.7   0.1    9.0  9  Sel1      Sel1 repeat
  ------ inclusion threshold ------
      0.056   13.3   0.1         19    5.2   0.0    2.6  2  YajC      Preprotein translocase subunit
        0.2   11.4   2.3        4.1    7.2   0.3    3.7  3  TPR_11    TPR repeat
          5    7.1   9.9        5.6    7.0   0.0    5.1  6  TPR_1     Tetratricopeptide repeat
        5.9    7.5   7.0         42    4.9   0.1    4.0  4  TPR_17    Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> Sel1  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0   0.00088       3.1       1      38 []      81     122 ..      81     122 .. 0.87
   2 !    9.5   0.0   0.00045       1.6       2      32 ..     124     152 ..     123     156 .. 0.89
   3 !    5.4   0.9     0.009        32       3      36 ..     215     247 ..     213     249 .. 0.83
   4 !   13.3   0.0     3e-05      0.11       4      31 ..     286     311 ..     283     318 .. 0.87
   5 ?    4.4   0.2     0.019        67       7      38 .]     325     354 ..     319     354 .. 0.74
   6 ?   -0.1   0.2      0.47   1.7e+03       2      16 ..     388     398 ..     387     409 .. 0.66
   7 ?   -1.3   0.3       1.2   4.2e+03      26      34 ..     481     489 ..     476     489 .. 0.86
   8 !   14.8   0.0   9.6e-06     0.034       3      34 ..     496     525 ..     494     528 .. 0.90
   9 !   18.7   0.1   5.7e-07     0.002       2      28 ..     532     556 ..     531     560 .. 0.90

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00088
        Sel1   1 aeAmyrLGmfylylnGl......gvpkDpekAiewyekAAeqGd 38 
                 + +++ +Gm+y    G        +p+D+ + + ++e++A+q++
  EPX72239.1  81 SKSQFLVGMLY--AMGPddnliiQLPQDEALSRLYLELSAKQNY 122
                 579*****888..88888898855999**************985 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00045
        Sel1   2 eAmyrLGmfylylnGlgvpkDpekAiewyek 32 
                 +A+ +LG  y y +G g+ k  +k++ +y++
  EPX72239.1 124 YALLALG--YRYTTGIGTTKQLDKGLSYYRQ 152
                 69999**..********9999*******997 PP

  == domain 3  score: 5.4 bits;  conditional E-value: 0.009
        Sel1   3 AmyrLGmfylylnGl.gvpkDpekAiewyekAAeq 36 
                 A+ +L+ +y  + G+ g  + p +A+++y  A ++
  EPX72239.1 215 AYLNLAAVY--HRGQlGKARKPALAMKHYLSALRL 247
                 899***777..****665558********999765 PP

  == domain 4  score: 13.3 bits;  conditional E-value: 3e-05
        Sel1   4 myrLGmfylylnGlgvpkDpekAiewye 31 
                 +++LG+++  l+G+   ++p  A+ w+e
  EPX72239.1 286 AFNLGCME--LHGDLGNRNPAAAFNWFE 311
                 79***888..****9999*********9 PP

  == domain 5  score: 4.4 bits;  conditional E-value: 0.019
        Sel1   7 LGmfylylnGlgvpkDpekAiewyekAAeqGd 38 
                 L+  yly+    v  D+++A ++++ A +qGd
  EPX72239.1 325 LA--YLYFMNYQVAMDESQAKQLLREAIAQGD 354
                 56..555555534449***************7 PP

  == domain 6  score: -0.1 bits;  conditional E-value: 0.47
        Sel1   2 eAmyrLGmfylylnG 16 
                 eA+  L+  y  l+ 
  EPX72239.1 388 EAALYLA--Y--LYS 398
                 7899999..8..444 PP

  == domain 7  score: -1.3 bits;  conditional E-value: 1.2
        Sel1  26 AiewyekAA 34 
                 A+ +y +AA
  EPX72239.1 481 ALTYYSRAA 489
                 899*****9 PP

  == domain 8  score: 14.8 bits;  conditional E-value: 9.6e-06
        Sel1   3 AmyrLGmfylylnGlgvpkDpekAiewyekAA 34 
                 ++ +++ fy  ++G g+p+D  +A+ +y +AA
  EPX72239.1 496 SLIKVADFY--QFGIGTPTDFGLAFTLYTQAA 525
                 678999777..********************9 PP

  == domain 9  score: 18.7 bits;  conditional E-value: 5.7e-07
        Sel1   2 eAmyrLGmfylylnGlgvpkDpekAie 28 
                  A++rLG  +++++G+g+p+D e A +
  EPX72239.1 532 LAYWRLG--EMHEYGRGIPRDFEMAKK 556
                 79*****..**************9977 PP

>> YajC  Preprotein translocase subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0    0.0055        20      10      51 ..     325     364 ..     323     376 .. 0.84
   2 ?    5.2   0.0    0.0053        19       5      27 ..     680     702 ..     676     708 .. 0.80

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.0055
        YajC  10 fvifyfllirpqqkkqkehkemlasLkkGdeVvtigGivGkv 51 
                 ++ +yf+ +   + + ++++ +++++++Gd +  +  i Gk+
  EPX72239.1 325 LAYLYFMNYQVAMDESQAKQLLREAIAQGDPIAYT--IAGKI 364
                 5789***************************9877..77777 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0053
        YajC   5 plvlifvifyfllirpqqkkqke 27 
                 + +l++++ y+l+ r qq ++ +
  EPX72239.1 680 VTLLVVIVGYVLMKRHQQSRRSQ 702
                 456777788*********99877 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.3    0.0012       4.1      26      40 ..     211     225 ..     207     226 .. 0.89
   2 ?   -2.0   0.0      0.84     3e+03      13      23 ..     237     247 ..     236     247 .. 0.91
   3 ?    1.0   0.0     0.093   3.4e+02       1      14 [.     362     375 ..     362     381 .. 0.87

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0012
      TPR_11  26 dnaeayynLGlayyk 40 
                 +n +ay+nL+++y++
  EPX72239.1 211 NNITAYLNLAAVYHR 225
                 89***********96 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.84
      TPR_11  13 AieaYkkAlkl 23 
                 A+++Y  Al+l
  EPX72239.1 237 AMKHYLSALRL 247
                 899******97 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.093
      TPR_11   1 GdayyeqGkyeeAi 14 
                 G++  +q+k+eeA+
  EPX72239.1 362 GKIAISQNKIEEAL 375
                 778889*******8 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       2.4   8.7e+03      16      26 ..     142     152 ..     141     153 .. 0.60
   2 ?    0.3   0.2       0.2   7.2e+02       3      12 ..     215     224 ..     213     226 .. 0.88
   3 ?    1.0   0.0      0.12   4.1e+02      13      30 ..     230     247 ..     228     248 .. 0.85
   4 ?    7.0   0.0    0.0016       5.6       5      27 ..     359     381 ..     355     383 .. 0.80
   5 ?   -2.3   0.1       1.3   4.8e+03      20      27 ..     481     488 ..     480     491 .. 0.79
   6 ?   -0.4   0.0      0.32   1.2e+03      16      30 ..     550     564 ..     549     567 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 2.4
                 -HHHHHHHHHH CS
       TPR_1  16 kydeAleyyek 26 
                 ++d+ l yy++
  EPX72239.1 142 QLDKGLSYYRQ 152
                 56666666665 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.2
                 HHHHHHHHHH CS
       TPR_1   3 alynlGnayf 12 
                 a+ nl+++y+
  EPX72239.1 215 AYLNLAAVYH 224
                 9********7 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.12
                 HTT-HHHHHHHHHHHHHH CS
       TPR_1  13 klgkydeAleyyekALel 30 
                 k  k+  A ++y  AL+l
  EPX72239.1 230 KARKPALAMKHYLSALRL 247
                 5678999*********98 PP

  == domain 4  score: 7.0 bits;  conditional E-value: 0.0016
                 HHHHHHHHHTT-HHHHHHHHHHH CS
       TPR_1   5 ynlGnayfklgkydeAleyyekA 27 
                    G +  +++k +eAl+y+  A
  EPX72239.1 359 TIAGKIAISQNKIEEALDYFLHA 381
                 555889999**********9665 PP

  == domain 5  score: -2.3 bits;  conditional E-value: 1.3
                 HHHHHHHH CS
       TPR_1  20 AleyyekA 27 
                 Al yy++A
  EPX72239.1 481 ALTYYSRA 488
                 77888887 PP

  == domain 6  score: -0.4 bits;  conditional E-value: 0.32
                 -HHHHHHHHHHHHHH CS
       TPR_1  16 kydeAleyyekALel 30 
                 +++ A + y+  Le+
  EPX72239.1 550 DFEMAKKNYDISLEI 564
                 89*******999998 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.1     0.012        42       9      27 ..     209     229 ..     206     236 .. 0.78
   2 ?   -3.5   0.0         5   1.8e+04      13      22 ..     283     292 ..     275     299 .. 0.74
   3 ?   -1.5   0.1       1.2   4.3e+03      11      28 ..     317     334 ..     317     343 .. 0.79
   4 ?    3.8   0.2     0.025        88      12      29 ..     386     403 ..     381     407 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.012
      TPR_17   9 dPnnadaynnLAelll..knG 27 
                 + nn  ay nLA +++  ++G
  EPX72239.1 209 NGNNITAYLNLAAVYHrgQLG 229
                 6799**********9744444 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 5
      TPR_17  13 adaynnLAel 22 
                 a+  +nL+  
  EPX72239.1 283 ANTAFNLGCM 292
                 7778888865 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 1.2
      TPR_17  11 nnadaynnLAelllknGd 28 
                 n++ +   LA+l+ +n +
  EPX72239.1 317 NHSSSRSALAYLYFMNYQ 334
                 567788899***988766 PP

  == domain 4  score: 3.8 bits;  conditional E-value: 0.025
      TPR_17  12 nadaynnLAelllknGdl 29 
                 n +a  +LA+l++  ++ 
  EPX72239.1 386 NLEAALYLAYLYSDSNQE 403
                 77999********99884 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (715 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       553  (0.0308439); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.63u 0.28s 00:00:00.91 Elapsed: 00:00:00.53
# Mc/sec: 4058.33
//
Query:       EPX72240.1  [L=293]
Description: swi five-dependent recombination repair protein Sfr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-27   96.0   0.0    5.6e-27   94.9   0.0    1.6  1  Mei5      Double-strand recombination repair protein
  ------ inclusion threshold ------
        3.2    6.3   5.5        3.9    6.1   5.5    1.2  1  Ndc1_Nup  Nucleoporin protein Ndc1-Nup


Domain annotation for each model (and alignments):
>> Mei5  Double-strand recombination repair protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.9   0.0   6.3e-31   5.6e-27      10     206 .]      84     285 ..      62     285 .. 0.82

  Alignments for each domain:
  == domain 1  score: 94.9 bits;  conditional E-value: 6.3e-31
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXX......XXXXXXXXXXXXXXXXXXX... CS
        Mei5  10 psskkkkssgKqplsktlkerLkktrssfnsd...tnvvkrlkveneennetssekatsskeenqlqqsikildseeeeskllkstiknrdvcksessl 105
                 p+  k+++++K+ l+k++k++Lk ++ + +s+    +v   +  e +  +e ss++++s+++    +  ik      + +k ++s+++  +  +s+   
  EPX72240.1  84 PNPRKRAREAKSVLLKPFKSPLKYPATP-KSTpgtSKVSNYTSDELKSSDEVSSDPVSSPSRPP--PRVIK------RAKKTFRSPVSSGSKVQSD--- 170
                 344589******************9999.44301022222222224445666666666666666..88888......7889999999999999999... PP

                 ..........XXXXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH......................SS CS
        Mei5 106 ilnslkekielekkeLeeekakLekqvrekeelLrrLklvkkyeskndlseLqllikkwrnasqklleeLqkala......................es 182
                           +e  +L++e++ Lek+vr+ +e+L +++++kk+eskn++++L+ l+ kwr  +q+++++L +++a                      + 
  EPX72240.1 171 ----------PEVARLLSERLILEKDVRNLQEQLTTAETAKKVESKNEDKDLEALVYKWRGVAQRAAQVLYQPMAerirlaggvmqkytiqegedagQ- 258
                 ..........78889**************************************************************************998866552. PP

                 TTT.....---HHHHHHHTT--TTTS-EE CS
        Mei5 183 enk.....eltlteLidryglddkLlhyn 206
                         e+t+ +++ ++g++  L+ y+
  EPX72240.1 259 --IeekrtEFTMGMFLHQFGVPFDLIAYD 285
                 ..044467******************997 PP

>> Ndc1_Nup  Nucleoporin protein Ndc1-Nup
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   5.5   0.00043       3.9     370     467 ..      59     187 ..      23     280 .. 0.53

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.00043
    Ndc1_Nup 370 asapvkelprlsksplkkk.dde...................ifgnsltaeaspkssssskegvekalsslakspgqs.psptarlsprarkllekaks 447
                  s+ +++lp+ls + +k++ + +                    f+++l+  a+pks+   +++v++ +s+  ks  +  + p+++ s+  ++++++ak+
  EPX72240.1  59 ISQDNSDLPSLS-DMEKHNpNAPlnppnprkrareaksvllkPFKSPLKYPATPKST-PGTSKVSNYTSDELKSSDEVsSDPVSSPSRPPPRVIKRAKK 155
                 333333333333.22222221111111122222222232222454455555666665.66666666666666666555666666666566666666666 PP

    Ndc1_Nup 448 rllskeqkealsestikkk............v 467
                 ++ s+ ++ + ++s ++              v
  EPX72240.1 156 TFRSPVSSGSKVQSDPEVArllserlilekdV 187
                 66664333322222222213333333333331 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       844  (0.0470746); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2162.99
//
Query:       EPX72241.1  [L=273]
Description: Mdm10/Mdm12/Mmm1 complex subunit Mdm12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.7e-06   26.2   1.0       0.13   11.3   0.3    3.1  2  MMM1      Maintenance of mitochondrial morphology protein 1


Domain annotation for each model (and alignments):
>> MMM1  Maintenance of mitochondrial morphology protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.0   0.0   0.00014       2.5     125     159 ..      14      48 ..       6      62 .. 0.89
   2 !   11.3   0.3     7e-06      0.13     173     229 ..     142     198 ..     117     272 .. 0.65

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.00014
                 HHHHHHHHHHHHHHGGCS-TTEEEEEEEEEE--S- CS
        MMM1 125 ekdnilksLnealnseelpdyldkikvteidlGed 159
                  ++ +++ L++ +++ +lp+y+ ++kvt  + G+ 
  EPX72241.1  14 LEERLFHILEDRVSKLDLPSYIKNLKVTGFHFGDI 48 
                 6788999************************9985 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 7e-06
                 TTTTSS-EEEEEEEEEEEEEEEEEEEEEEESSSSSSEE---EEEEEEEEEEEEEEEE CS
        MMM1 173 kesekkrLeakidvdlsDtltlgietkLllnyPkpltavLPvalavsvvrfsgtLtv 229
                 ++++++ ++  + v+   + +l++e+++ +nyP   ++ LP +l    +   +   +
  EPX72241.1 142 ERNRSDDFQVTVHVQYDGNASLSLEASISINYPNSEFVSLPFQLVFKEISIDAIAVL 198
                 344667789999999999999********************9997766655554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (273 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       416  (0.0232026); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2004.75
//
Query:       EPX72242.1  [L=274]
Description: xylose and arabinose reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.9e-36  125.8   0.0    5.1e-34  117.8   0.0    2.0  1  Aldo_ket_red  Aldo/keto reductase family


Domain annotation for each model (and alignments):
>> Aldo_ket_red  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.8   0.0   2.9e-38   5.1e-34      19     287 ..      23     253 ..      10     259 .. 0.88

  Alignments for each domain:
  == domain 1  score: 117.8 bits;  conditional E-value: 2.9e-38
                   HHHHHHHHHHHTT--EEE--TT-TTTH.HHHHHHHHHHH.-TTTGGG-EEEEEE--SSSTTSSSS-HHHHHHHHHHHHHHHT-S-EEEEEE-S--TT CS
  Aldo_ket_red  19 ealellrraleaGinffDtAevYgkgq.seellGealkk.srkkreeviiatKvdlrdaeiksglskeniresleeslkrLgtdyvDllllHrpdps 113
                   + ++ + +al+ Gi+++D+A +Y++ + +e  ++ + k+   + r+++ ++tK+     + ++g   e+  ++  +sl+r ++  +Dl+l+H p+  
    EPX72242.1  23 DCYQQVYKALSLGIRLIDSAISYRNERdCECAIQDFCKSnPDVTRDDITLVTKI----PDSMQG--FERTWKATLQSLRRVDRPFLDLVLIHSPKWP 113
                   55667889***************6555166669999999999************....444555..555568999********************** PP

                   S-.HHHHHHHHHHHHHTTSEEEEEEES--HHHHHHHHHTTT--EEEEE-B-BTT-HHHHTTHHHHHHHTT-EEEEBSTTGGGTTGTTTSS---SSSC CS
  Aldo_ket_red 114 lpsieevldaleelvkeGkiraiGvSnfsveqlekakkkkkvkivavqveynllreleeegllelckkkgvpliaysplggGlltgkyqseedkedk 210
                      ++e ++al el+k+G +r iGvSn+++ +le++   +   ++++q+e + +    + ++ e+c kkg+ ++a+spl  G +             
    EPX72242.1 114 ER-RLESWRALLELKKQGIVRKIGVSNYNIHHLEEIGVSQLPLPAVNQIELSAF--NTKIEIQEYCFKKGITVMAFSPLTTGQRL------------ 195
                   *9.*********************************555555699*********..999*********************88665............ PP

                   CC-------TS-HHHHHHHHHHHHHHHHTT--HHHHHHHHHTTSTT-SEEEE--SSHHHHHHHHGGGG----HHHHH CS
  Aldo_ket_red 211 eprkdlkrdertsknldaaeelselakehgvslaqlalryalsqpavgivipgasnieqlednldalelklseeeva 287
                                     + +l +la++++ +++ql lry+l  ++++++i+ +++++++ +n++ ++++++ ++va
    EPX72242.1 196 -----------------DDVRLLSLAAKYKRTPSQLLLRYCL--ERNISPIFMSTKLDRISENAGCMDFQMDFQDVA 253
                   .................456799*******************..*************************99988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (274 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       340  (0.0189637); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.28s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 1999.58
//
Query:       EPX72243.1  [L=189]
Description: splicing factor Cwf7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      4e-33  114.8   3.2      7e-33  114.1   3.2    1.3  1  BCAS2        Breast carcinoma amplified sequence 2 (BCAS2)
     0.0092   16.1   2.4      0.012   15.8   2.4    1.1  1  UPF0242      Uncharacterised protein family (UPF0242) N-termi
  ------ inclusion threshold ------
      0.081   13.4   3.7       0.16   12.4   3.7    1.5  1  Fungal_TACC  Fungal Transforming acidic coiled-coil (TACC) pr


Domain annotation for each model (and alignments):
>> BCAS2  Breast carcinoma amplified sequence 2 (BCAS2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.1   3.2   1.2e-36     7e-33       3     189 ..       7     184 ..       5     188 .. 0.91

  Alignments for each domain:
  == domain 1  score: 114.1 bits;  conditional E-value: 1.2e-36
       BCAS2   3 vDaLPYiDaeletpelreaveklieeElrrsrkkksdlaelPppkeekl.espllaaeleRveageplealDlsRYe.leaPsaekkedleaweealrn 99 
                 +DaLPY+++ + +++ r+ + kl+eeE  rs  +k   ++l +  ++ +  s+ +++ ++ + +ge+l++++++RY  l+aP +           +l +
  EPX72243.1   7 LDALPYYEKGY-QEQDRAVAMKLVEEEVVRSGGTKLPNPSLDEFTTP-FkISERMQNAVQAAGRGEKLQSININRYInLQAPGNP---------GSLMQ 94 
                 8**********.****************9999888665555555433.245999**********************99****765.........67999 PP

       BCAS2 100 akaqlehqalRqeNleLlekygknaWrvhneqleaelkklekeleetkeeieevnrqRkseQeeageeLksleekWrelvsknleieaac 189
                 +  +le++++R+ NleLl+k+g+ aW+ h   le++l+++e+e+++t+++ + +nr+Rk+ Q e+ge+L + e+++ +l  + ++  +a 
  EPX72243.1  95 SAIALEYLRSREDNLELLKKHGESAWKNHIDSLEEILQNMEREIQTTRKKSQICNRKRKHYQLEMGEKLVDQESQFGNLLLNSIQCRVAT 184
                 99******************************************************************************9999998886 PP

>> UPF0242  Uncharacterised protein family (UPF0242) N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   2.4   1.9e-06     0.012      81     153 ..      96     172 ..      51     182 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1.9e-06
     UPF0242  81 d...eglktkeealeelqee.eeeLkeeldakeeelerlkeenqqLqekleaiaedfeelkleleeqLaekqellqe 153
                     e l+  e++le l++  e   k+++d+ ee l+++++e q  ++k +   +  ++++le+ e+L  ++ ++ +
  EPX72243.1  96 AialEYLRSREDNLELLKKHgESAWKNHIDSLEEILQNMEREIQTTRKKSQICNRKRKHYQLEMGEKLVDQESQFGN 172
                 0344556666666666665523445667*******************************************999865 PP

>> Fungal_TACC  Fungal Transforming acidic coiled-coil (TACC) proteins
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   3.7   2.7e-05      0.16      16      73 ..     100     158 ..      93     162 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 2.7e-05
  Fungal_TACC  16 qYSsKHEqKVkllkkgyeakyqkkldklelenkslkqeieqLkkqlea.erkEKqeLlk 73 
                  +Y    E   +llkk  e+ +++++d+le+  +++++ei++ +k+ ++ +rk K+  l+
   EPX72243.1 100 EYLRSREDNLELLKKHGESAWKNHIDSLEEILQNMEREIQTTRKKSQIcNRKRKHYQLE 158
                  6777789999*******************************999987624555665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1474  (0.0822132); expected 358.6 (0.02)
Passed bias filter:                      724  (0.0403815); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 1491.17
//
Query:       EPX72244.1  [L=162]
Description: cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.8e-49  168.1   0.1      2e-49  167.9   0.1    1.0  1  Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans iso


Domain annotation for each model (and alignments):
>> Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  167.9   0.1   1.1e-53     2e-49       8     157 ..      12     160 ..       5     161 .. 0.87

  Alignments for each domain:
  == domain 1  score: 167.9 bits;  conditional E-value: 1.1e-53
  Pro_isomerase   8 s..kGrivieLfadkaPktvenFlklvkeg....fYdgttFhRvikgfmvqgGdptgktsageqe.kkggesiraipdEitsklkh.krGalamar 95 
                    +  +Griv++Lf+d +Pkt++nF+ l+ +g     Y g+tFhRvi++fm+qgGd+t ++  g++  +  g   +++pdE+ ++lkh k+G+l+ma+
     EPX72244.1  12 GqpLGRIVFKLFDDVVPKTAANFRTLC-TGekgfGYAGSTFHRVIPQFMLQGGDFTRGN--GTGGkSIYG---EKFPDEN-FSLKHnKPGLLSMAN 100
                    3468***********************.5668899*******************99984..443323333...69*****.77777799******* PP

  Pro_isomerase  96 tgkepnsagsqFfItlkeaphldgkytvFGkVveGmdvvekiekvetdeerpkknvkivsae 157
                    +g  pn++gsqFfIt+  +p+ldg+++vFG+V++Gmdvv+k e++ +++ +++ +++i +++
     EPX72244.1 101 AG--PNTNGSQFFITTVVTPWLDGRHVVFGEVTSGMDVVKKVESLGSNSGATRARIVIDKCG 160
                    98..8***************************************76666688888***9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       262  (0.0146132); expected 358.6 (0.02)
Passed bias filter:                      238  (0.0132746); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.20s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 1290.29
//
Query:       EPX72245.1  [L=300]
Description: mRNA export protein Mep33 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-20   74.0   1.7      1e-20   74.0   1.7    2.9  3  DFRP_C    DRG Family Regulatory Proteins, Tma46


Domain annotation for each model (and alignments):
>> DFRP_C  DRG Family Regulatory Proteins, Tma46
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.8      0.24   4.3e+03      31      31 ..      44      44 ..       5      73 .. 0.55
   2 ?   -1.5   6.0       0.2   3.6e+03      33      70 ..      70     105 ..      61     130 .. 0.48
   3 !   74.0   1.7   5.8e-25     1e-20       1      88 [.     197     283 ..     197     284 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.24
      DFRP_C 31 K 31
                K
  EPX72245.1 44 K 44
                1 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.2
      DFRP_C  33 krlekkeaeeekeekkkkkeglsGrelfefnpelaedd 70 
                 +++ +k +eeek++++++k      +lf+  p+  +++
  EPX72245.1  70 QEVMRKRREEEKKASEQAKA--EVSALFNALPNKHNNQ 105
                 44444444444433333332..3346674444444333 PP

  == domain 3  score: 74.0 bits;  conditional E-value: 5.8e-25
      DFRP_C   1 kitLEefiEteRakLdkklTpvtletFakWKkkrlekkeaeeekeekkkkke..glsGrelfefnpelaedddeeeeeeeeeawdleefr 88 
                 +i+LE fiE eR +L+++lT+vt+e+F++W ++r+++ ++e+e+++k++ +   +++Gre+fe n++ ++d  ++e+ee   +wd++++r
  EPX72245.1 197 EISLEAFIEIERYRLGPNLTRVTEENFKQWCDRRQDRLNKESEERRKNRPTGrgNITGREFFERNGSKVKDVGDAENEE---NWDFSALR 283
                 7***********************************999999998999888899*********9**9999999999877...9**99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (300 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2661  (0.148419); expected 358.6 (0.02)
Passed bias filter:                      632  (0.0352502); expected 358.6 (0.02)
Passed Vit filter:                        87  (0.00485247); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 2124.88
//
Query:       EPX72246.1  [L=694]
Description: hypothetical protein SOCG_00014 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.4e-24   85.5   4.0    3.4e-24   85.5   4.0    4.5  5  Uds1      Up-regulated During Septation
    0.00023   21.2   2.9    0.00023   21.2   2.9    4.2  4  HR1       Hr1 repeat
  ------ inclusion threshold ------
      0.014   14.9   4.0       0.21   11.1   3.1    2.7  1  UCH       Ubiquitin carboxyl-terminal hydrolase


Domain annotation for each model (and alignments):
>> Uds1  Up-regulated During Septation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.5   4.0   5.7e-28   3.4e-24       3     127 ..      71     181 ..      69     184 .. 0.95
   2 ?   -1.3   2.9      0.39   2.4e+03      80     116 ..     194     230 ..     182     241 .. 0.51
   3 ?   -1.4   1.0      0.41   2.4e+03      84     117 ..     425     458 ..     358     488 .. 0.64
   4 ?   -1.8   1.3      0.56   3.3e+03      26      50 ..     456     479 ..     432     525 .. 0.55
   5 !   10.1   0.8   0.00012      0.71       3     102 ..     528     626 ..     526     638 .. 0.72

  Alignments for each domain:
  == domain 1  score: 85.5 bits;  conditional E-value: 5.7e-28
        Uds1   3 lLvetAlvdsqefeiLsleeVeelkkelkaLeerlealrkkLaletklrdaarsLsrlyssskksakssaarsnskssreslakaeeelaeserkvdel 101
                 lLv+ A++d+++fe+L+ +eVee+kk++k++   l+ + kkLa+e k+r+aa++L+ +++++kk               ++++ + e++++++rkv el
  EPX72246.1  71 LLVSSAIKDASHFECLNGKEVEEIKKKIKVMRGNLDISVKKLAVEAKIREAAKNLMLAQTKEKKG--------------KHKQSTIEHYEQCSRKVREL 155
                 9**********************************************************555555..............48899*************** PP

        Uds1 102 aselekleeraaevrrrLLeHtAavL 127
                 +s+++ +e+++ e+   LL+H++av+
  EPX72246.1 156 SSKIWVIERKLSELYFFLLKHMVAVC 181
                 *************************8 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.39
        Uds1  80 sreslakaeeelaeserkvdelaselekleeraaevr 116
                 + ++++   e++++ ++k +e ++e+ + ee ++ v+
  EPX72246.1 194 QPNASNAVSEKREDDDKKLEEEEEEVMNHEEIQQLVE 230
                 3334444445555555555555555555554444433 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 0.41
        Uds1  84 lakaeeelaeserkvdelaselekleeraaevrr 117
                 l++ ee+ ++s + +++l+s++  l  ++ e+++
  EPX72246.1 425 LLRDEEKQTSSFEVIQNLHSQCSLLYGEKYELQQ 458
                 4444444444444444444444444444444443 PP

  == domain 4  score: -1.8 bits;  conditional E-value: 0.56
        Uds1  26 lkkelkaLeerlealrkkLaletkl 50 
                 l+++   Le+r+  l+++ +  +kl
  EPX72246.1 456 LQQNTLLLESRIAELENE-KKTNKL 479
                 555555555555555544.222222 PP

  == domain 5  score: 10.1 bits;  conditional E-value: 0.00012
        Uds1   3 lLvetAlvdsqefeiLsleeVeelkkelkaLeerlealrkkLaletklrdaarsLsrlyssskksakssaarsnskssres.....lakaeeelaeser 96 
                  + ++A + ++ fe  +++ ++ l++e + L +r+++l+ + + + + rd  + L  ++ + ++    +a+ ++ k+         + +ae++ ae  +
  EPX72246.1 528 AMNSQAGTSTEPFEGETQKHLDVLRRENELLHSRINTLELEKEQHERNRDTVNDLTLRQLQVEEM---FANLDSDKK---MdlglfDFRAEQNGAEKAN 620
                 5778999999*****************************99999999999999998888666555...221111111...1112235556666666666 PP

        Uds1  97 kvdela 102
                 kvde+ 
  EPX72246.1 621 KVDEVD 626
                 666665 PP

>> HR1  Hr1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   2.9   3.8e-08   0.00023       7      61 ..     110     169 ..     109     170 .. 0.89
   2 ?   -1.9   0.2      0.64   3.8e+03      45      60 ..     383     398 ..     361     400 .. 0.72
   3 ?   -2.2   1.3      0.78   4.6e+03      46      63 ..     455     472 ..     420     478 .. 0.51
   4 ?   -1.6   1.3      0.52   3.1e+03      21      65 ..     524     569 ..     507     573 .. 0.71

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 3.8e-08
         HR1   7 kklekElkireGAenllraleskktqnkk.....vrqeaeselsesnskielLreqLeel 61 
                 kkl++E kire+A+nl+ a +++k++ +k     + +++  + +e +ski  ++++L+el
  EPX72246.1 110 KKLAVEAKIREAAKNLMLAQTKEKKGKHKqstieHYEQCSRKVRELSSKIWVIERKLSEL 169
                 89****************97766666666688999**********************997 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.64
         HR1  45 sesnskielLreqLee 60 
                 +  n  +++L+ +L++
  EPX72246.1 383 DAQNEQVQFLQTELRK 398
                 4556689999999987 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 0.78
         HR1  46 esnskielLreqLeelqa 63 
                 e +++  lL+++++el++
  EPX72246.1 455 ELQQNTLLLESRIAELEN 472
                 344455566666666655 PP

  == domain 4  score: -1.6 bits;  conditional E-value: 0.52
         HR1  21 nllralesk.ktqnkkvrqeaeselsesnskielLreqLeelqasv 65 
                 ++++a++s+  t       e +  l+  +++ elL++++++l+ ++
  EPX72246.1 524 SVVKAMNSQaGTSTEPFEGETQKHLDVLRRENELLHSRINTLELEK 569
                 5677777774444444778888889999999999999998887754 PP

>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   3.1   3.4e-05      0.21      57     151 ..     392     552 ..     116     679 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 3.4e-05
                 HHHHHHHHHHHHHSH-CCEE--....................................................................HHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxx....................................................................xxxxxxxxx RF
         UCH  57 lakalkdlfkellkskskavsP....................................................................kklkktlsk 87 
                 l ++l+++ +     ++++v P                                                                    k l++ +s+
  EPX72246.1 392 LQTELRKVGHTTEDVSNSNVVPgsvpesngsnnllrdeekqtssfeviqnlhsqcsllygekyelqqntlllesriaelenekktnklleKDLLAQISQ 490
                 333333333333333344444466666666666666666666666666666666666666666666666666666666666666666665888888888 PP

                 HSGGGTSSSTCEHHHHHHHHHHHHHHHHCCHCCCHHHHHHCCCTTSHHHHHH-EEEEEEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH  88 laksfsgykqqDaqEflaflLdqlhedlnrevaeekwkkhlkrndslitdlfegqlksklklkr 151
                 l+ +    +q+ ++Ef++ l+++l ++  + +ae    k+++++  + t+ feg+++++l++ r
  EPX72246.1 491 LRLD--YEQQKESNEFTKKLVNSLRDERTAMQAELSVVKAMNSQAGTSTEPFEGETQKHLDVLR 552
                 8777..789********************95444455999999999********9999555433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (694 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1872  (0.104412); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.74u 0.27s 00:00:01.01 Elapsed: 00:00:00.49
# Mc/sec: 4292.87
//
Query:       EPX72247.1  [L=490]
Description: sulfate adenylyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.6e-88  293.2   0.1    1.3e-87  292.8   0.1    1.2  1  ATP-sulfurylase  ATP-sulfurylase
    7.6e-52  175.2   0.0    1.3e-51  174.4   0.0    1.3  1  PUA_2            PUA-like domain


Domain annotation for each model (and alignments):
>> ATP-sulfurylase  ATP-sulfurylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  292.8   0.1   1.4e-91   1.3e-87       3     211 ..     170     383 ..     168     384 .. 0.97

  Alignments for each domain:
  == domain 1  score: 292.8 bits;  conditional E-value: 1.4e-91
                      CB.-HHHHHHHHHHTT-SSEEEEEESS---HHHHHHHHHHHHH.TSEEEEEEEB-SB-STTSTTHHHHHHHHHHHHHHHS-GGGEEE-BB-SB- CS
  ATP-sulfurylase   3 yrltPaevreefkekgwdkVvAfqtrnplHraHeellkralee.eadglllhplvgptkpgdvpaevrvrayealieeylpkdrvvlallplam 95 
                      yr+tP+e+r ef++++w++VvAfqtrnp+HraH+el+ ra+++ +a  +l+hp+vg+tkpgd+++++rvr yea++++ +pk +++l+llplam
       EPX72247.1 170 YRYTPSELRSEFERNNWKRVVAFQTRNPMHRAHRELTVRAAKQhSAR-VLIHPVVGMTKPGDIDHFTRVRVYEAILQR-YPKGSAKLSLLPLAM 261
                      9*****************************************96666.******************************.*************** PP

                      --SCHHHHHHHHHHHHHTT-SEEEE-TTTT-STC......SS-TTHHHHHHHHCHHHCTSEEEE---EEEETTTTEEEECCCCGCCGGEEE--H CS
  ATP-sulfurylase  96 ryaGprEallhaiirknyGcthfivGrdhagvgd......fYgpydaqellakvagelgiepvkfeeavYckkegevasektchkkeevesisg 183
                      r+aGprEal+haiirknyG++hfi+Grdhag+g+      fYgpydaq l++++++e+gi +v+f+++ Y ++e+ ++   + + ++++ +isg
       EPX72247.1 262 RMAGPREALWHAIIRKNYGASHFIIGRDHAGPGKnsqgqdFYGPYDAQYLVEQYSHEIGISIVPFQMMTYLPEEDIYKPVDQVEAGTRTLNISG 355
                      ***************************************************************************77777777*********** PP

                      HHHHCCHHTT----TTTS-HHHHHHHHH CS
  ATP-sulfurylase 184 telrkllregeeipewfsrpevlkvLre 211
                      telr++l +g +ipewfs+p+v+++Lr+
       EPX72247.1 356 TELRRRLLTGAHIPEWFSYPQVVSILRQ 383
                      **************************97 PP

>> PUA_2  PUA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  174.4   0.0   1.5e-55   1.3e-51       8     158 ..       6     160 ..       2     161 .. 0.96

  Alignments for each domain:
  == domain 1  score: 174.4 bits;  conditional E-value: 1.5e-55
                 ----B--CH.HHHHHHHHHHTS-EEE--HHHHHHHHHHHTTTTTT-SCC--HHHHHHHHHHSEETTS-E-SS---EEEECCHCHHHTT-SEEEEEETT. CS
       PUA_2   8 Lvelvvede.ekeellkeakelpsielskrelqdlellaeGgfsPLegFmreedyesvleemrLadgllwsiPivLdvseedakklkegdrvaLkdke. 104
                 +++l+++d+  +e+l kea++lp+i ls+r+++dlel+ +GgfsPLegFm++edy+sv+++ rL++g +++iP++Ldvse+ a+++k +drv L d++ 
  EPX72247.1   6 MKDLFARDApLREQLNKEAASLPKIVLSERQFCDLELILNGGFSPLEGFMTQEDYQSVVHNLRLKSGAVFPIPVTLDVSEKVAESIKTSDRVSLLDPRd 104
                 7899999999999***********************************************************************************996 PP

                 .TEEEEEEEEEEEEE-HHHHHHHHHHS---TTSHHHHHHC.TS-SEEEEEEEEE-S CS
       PUA_2 105 .gellAileveeiyeldkeeeaekvfgttdeaHPgvkkvl.eqgevlvgGkvevle 158
                  +++lAil+v+++y +dk  eaekvfg++d+aHP+v++++ ++g+v++gGk+++++
  EPX72247.1 105 eQTILAILTVDDKYVPDKVVEAEKVFGANDRAHPAVEYLFgTAGDVYLGGKLQAVN 160
                 4556*************************************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (490 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       414  (0.0230911); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.45
# Mc/sec: 3263.01
//
Query:       EPX72248.1  [L=117]
Description: membrane protein Mgr2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-27   95.3   9.5    2.5e-27   95.0   9.5    1.1  1  Romo1     Reactive mitochondrial oxygen species modulator 1
  ------ inclusion threshold ------
      0.085   13.2   2.1       0.13   12.6   2.1    1.2  1  Tim17     Tim17/Tim22/Tim23/Pmp24 family


Domain annotation for each model (and alignments):
>> Romo1  Reactive mitochondrial oxygen species modulator 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.0   9.5   2.8e-31   2.5e-27       1      65 [.       7      71 ..       7      72 .. 0.98

  Alignments for each domain:
  == domain 1  score: 95.0 bits;  conditional E-value: 2.8e-31
       Romo1  1 scldkikmGalmGaaVGlaiGllfGtfsalryglrgrgllrtlgksmlgsaatFGfFmsiGsviR 65
                s++dk+kmGa+mG+a Gl iG+lfG++++lryg+++rg+lrtlg++ml+saatFGfFmsiGsviR
  EPX72248.1  7 STTDKLKMGAIMGSAAGLGIGFLFGGMAVLRYGPGPRGFLRTLGQYMLTSAATFGFFMSIGSVIR 71
                5789************************************************************9 PP

>> Tim17  Tim17/Tim22/Tim23/Pmp24 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   2.1   1.5e-05      0.13       7      62 ..      14      66 ..       9      74 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.5e-05
       Tim17  7 lsgvlGallGavfglvkgsrradtpapskerlreglrsvgkrgpslGknfgvvggl 62
                +++++G ++G  +g++ g ++      ++   r +lr +g+++ +++ +fg+++ +
  EPX72248.1 14 MGAIMGSAAGLGIGFLFGGMAVLR---YGPGPRGFLRTLGQYMLTSAATFGFFMSI 66
                677888888888888888888775...88889********************9866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       339  (0.0189079); expected 358.6 (0.02)
Passed bias filter:                      266  (0.0148363); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 896.24
//
Query:       EPX72249.1  [L=654]
Description: hypothetical protein SOCG_00015 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00025   20.4   0.1    0.00048   19.5   0.1    1.4  1  UPF0300   Uncharacterised protein family (UPF0300)


Domain annotation for each model (and alignments):
>> UPF0300  Uncharacterised protein family (UPF0300)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.1   2.7e-08   0.00048      36     156 ..     495     610 ..     485     651 .. 0.88

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 2.7e-08
     UPF0300  36 YpeelkdalWkAvevyvseqvssgkytklhvkaaqkklgdiRlyLvkpediyvvknssdWiaisnknFqcyiqleekleekklksekskieelasvaes 134
                  p++ + alW  +  + s+q ++  ++  + ++++ ++g+++l+ v  +  ++v+n+ + + + +    ++  +++  +       +sk+++l+++a s
  EPX72249.1 495 LPSSQRRALWVELADFSSKQETDPLLSLWKRQVINCRIGHPKLHTVPISAFFCVENQPRLVGVKTATATSFFYIDRDFTIY-----DSKTQALLRSAPS 588
                 5888999*******************************************************************9987766.....788999******* PP

     UPF0300 135 eeelgWLllllsigsnasafPi 156
                 ++   WLl++  ++  ++ fP 
  EPX72249.1 589 RSAQNWLLIIQHLEFLGRSFPH 610
                 ************9999999994 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (654 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       767  (0.0427799); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.26s 00:00:00.88 Elapsed: 00:00:00.45
# Mc/sec: 4393.36
//
Query:       EPX72250.1  [L=307]
Description: DASH complex subunit Ask1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      3e-29  100.7   0.2    6.2e-29   99.7   0.2    1.5  1  DASH_Ask1  DASH complex subunit Ask1


Domain annotation for each model (and alignments):
>> DASH_Ask1  DASH complex subunit Ask1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.7   0.2   3.5e-33   6.2e-29       1      64 []       7      70 ..       7      70 .. 0.99

  Alignments for each domain:
  == domain 1  score: 99.7 bits;  conditional E-value: 3.5e-33
   DASH_Ask1  1 leqldqeitltLqeIDanlsrcfriitkkilPavkrYgeasekiwesakfwksffeqsAnveLs 64
                le+l+q+itl+L eIDan+++c+r+++++ilP+v++Y++++++iwes+kfwk+ffe+sA+v+Ls
  EPX72250.1  7 LERLEQSITLALYEIDANFAKCNRTVSTRILPVVENYAKSCNNIWESSKFWKQFFEASASVSLS 70
                8************************************************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (307 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       574  (0.0320152); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 2213.30
//
Query:       EPX72251.1  [L=131]
Description: trafficking protein Pga2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-29  101.8   0.4    4.3e-29  101.3   0.4    1.2  1  PGA2      Protein trafficking PGA2


Domain annotation for each model (and alignments):
>> PGA2  Protein trafficking PGA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.3   0.4   2.4e-33   4.3e-29       3     138 .]       4     130 ..       2     130 .. 0.92

  Alignments for each domain:
  == domain 1  score: 101.3 bits;  conditional E-value: 2.4e-33
        PGA2   3 nlsesfssltakdwirlvlivggYlllRPYleklfkklqekqrekeeekeeaeekaakkakvspnalRggeak.sgesdedddegeeeedvakasgvpe 100
                 ++s+++ s+t++dwir+ ++++gYlllRPYl+k+++klqek ++k+ee+          a+++ +  +g++ak +ge+d+dd+++      ++++++ +
  EPX72251.1   4 DVSGYLRSYTIRDWIRICIYICGYLLLRPYLMKIGAKLQEKGHKKAEEQG---------ANIDSELTHGKTAKfHGEFDTDDEDEK-----ENPDAEFR 88 
                 68999**************************************9987765.........6799999*******99****9997754.....48****** PP

        PGA2 101 wgkkarkrqkkvlkkleeeae....erkkeeeddkdiaelLe 138
                 wg++ar+r +k++ ++ ++++        ++++d di+e+Le
  EPX72251.1  89 WGYSARRRIRKQRNEYFKNQDksplDAYVDDDNDADIQEHLE 130
                 ******************99999988888999********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       884  (0.0493056); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.29s 00:00:00.72 Elapsed: 00:00:00.45
# Mc/sec: 882.65
//
Query:       EPX72252.1  [L=591]
Description: actin cortical patch protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.4e-25   87.4   0.0    2.4e-24   85.5   0.0    2.0  2  DUF2183   Uncharacterized conserved protein (DUF2183)


Domain annotation for each model (and alignments):
>> DUF2183  Uncharacterized conserved protein (DUF2183)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0      0.67   1.2e+04       7      25 ..     151     169 ..     150     199 .. 0.67
   2 !   85.5   0.0   1.3e-28   2.4e-24       1      99 []     330     427 ..     330     427 .. 0.96

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 0.67
     DUF2183   7 spwnlyplleeFleenglP 25 
                 s ++l +++++F++ + + 
  EPX72252.1 151 SSYSLSNFVQRFMSPSTMS 169
                 5677777778877766554 PP

  == domain 2  score: 85.5 bits;  conditional E-value: 1.3e-28
     DUF2183   1 ffYvSaspwnlyplleeFleenglPk.gslllrdlsltlksllkekstaehKraeiekiletfperkfiliGDsgqkdpeiYaeiakefpeqikaiyIR 98 
                 +++vS+spw+l+p+++eF++++++P   s+ lr++s+ +++l++   +a++Kr+++ + ++++ +rk++liGD+g++d++iYaei + fp++++ i+IR
  EPX72252.1 330 IHFVSNSPWQLWPMISEFFDTSNIPLiASIQLRHFSSVIQNLVE--PAAQRKREALLHTIRNLGDRKLLLIGDNGEQDLDIYAEITTCFPDRVLGILIR 426
                 69***********************868999*****99999997..589************************************************** PP

     DUF2183  99 d 99 
                 d
  EPX72252.1 427 D 427
                 7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (591 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       489  (0.0272742); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 4231.43
//
Query:       EPX72253.1  [L=126]
Description: 60S ribosomal protein L26 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.7e-36  124.5   2.2      2e-36  124.3   2.2    1.1  1  Ribosomal_L26  Ribosomal proteins L26 eukaryotic, L24P archae
    5.6e-08   32.5   0.2    1.2e-07   31.5   0.2    1.5  1  KOW            KOW motif
  ------ inclusion threshold ------
      0.037   13.1   0.3      0.042   12.9   0.3    1.1  1  DUF4663        Domain of unknown function (DUF4663)


Domain annotation for each model (and alignments):
>> Ribosomal_L26  Ribosomal proteins L26 eukaryotic, L24P archaeal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.3   2.2   3.4e-40     2e-36       1      82 []       8     121 ..       8     121 .. 0.99

  Alignments for each domain:
  == domain 1  score: 124.3 bits;  conditional E-value: 3.4e-40
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................................xxxxxxxxxxxxxxxxxxxxx RF
  Ribosomal_L26   1 sssrrkqrKahfnapshirrklmsapLskeLrekygvrslpir................................gvtrekangttvpvgihpSkv 64 
                    s srrkqrKahf aps++rr lmsapLskeLre+y++rslp+r                                +vtrekang+++p+gi++Skv
     EPX72253.1   8 SDSRRKQRKAHFAAPSSVRRVLMSAPLSKELREQYNIRSLPVRrddqvtvvrgsnkgregkitsvyrkkflllieRVTREKANGASTPLGIDASKV 103
                    789********************************************************************************************* PP

                    xxxxxxxxxxxxxxxxxx RF
  Ribosomal_L26  65 vItklklDkdrkkiLerk 82 
                    vI kl+lDkdrk+++ rk
     EPX72253.1 104 VINKLHLDKDRKNLILRK 121
                    ***************998 PP

>> KOW  KOW motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.5   0.2   1.9e-11   1.2e-07       2      29 ..      52      84 ..      51      86 .. 0.87

  Alignments for each domain:
  == domain 1  score: 31.5 bits;  conditional E-value: 1.9e-11
                TSEEEESSSTTTTCEEEEEEEETTT.....TEE CS
         KOW  2 GdhVkVvsGphkGktGkVvkvdqhk.....vrV 29
                +d V Vv+G +kG++Gk+++v+++k     +rV
  EPX72253.1 52 DDQVTVVRGSNKGREGKITSVYRKKfllliERV 84
                89***********************66666555 PP

>> DUF4663  Domain of unknown function (DUF4663)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.3     7e-06     0.042     221     289 ..      11      76 ..       4     104 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 7e-06
     DUF4663 221 dklprearwvrssyaervrkvvnaallrkssktqlnsdskPslpsdPkpvpqekpegresrvSyksrnp 289
                  +++r a+++ +   + vr+v+++a l+k  + q n  s P    d  +v  + ++gre ++  + r  
  EPX72253.1  11 RRKQRKAHFAAP---SSVRRVLMSAPLSKELREQYNIRSLPVRRDDQVTVVRGSNKGREGKITSVYRKK 76 
                 45679*******...99*******************************************998887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       439  (0.0244855); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.38s 00:00:00.93 Elapsed: 00:00:00.56
# Mc/sec: 680.15
//
Query:       EPX72254.1  [L=808]
Description: OPT oligopeptide transporter Isp4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.1e-194  648.6  51.1   1.2e-194  648.5  51.1    1.0  1  OPT       OPT oligopeptide transporter protein


Domain annotation for each model (and alignments):
>> OPT  OPT oligopeptide transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  648.5  51.1  6.7e-199  1.2e-194       1     616 []     110     764 ..     110     764 .. 0.99

  Alignments for each domain:
  == domain 1  score: 648.5 bits;  conditional E-value: 6.7e-199
         OPT   1 elTlRavvlGillgvlgsavnmyfglrtglvsissipaallafplgkalarilpk.........lslnpgpftikEnvliqtmasaaatlalatglivv 90 
                 ++T+R++++G++++++g+avnm+f+lr + v+is+++a+l+a+p++k +++i+p+         ++++pgpf+ kE++li++m+ +++++a++t++i++
  EPX72254.1 110 CNTIRMWTIGFIFSTVGAAVNMFFSLRNPPVTISVLIAQLIAYPCLKGWDFIFPNrqfrigrlrFNFKPGPFNMKEHTLIVIMSTVSFGSAYSTDIILA 208
                 79************************************************************************************************* PP

         OPT  91 ipalelygqsagfgylillslsvqllGvgfagplRkflvypeklifPsglataellkalhkpegee.........ksrlkfflivflgsfvwglfplyl 180
                 ++a+  y+q++gfgy i+l+l++ql+G+g+ag+ Rk+lv+p+ +++Ps+l  ++l+k+lh p +++         +s ++fflivf+g f+w +fp+y+
  EPX72254.1 209 QRAF--YKQRFGFGYEICLTLATQLIGYGLAGISRKILVRPAAMVWPSNLINTALMKTLHLPSKAAyiktangwnISAYRFFLIVFAGIFFWTWFPNYI 305
                 ****..*********************************************************999********************************* PP

         OPT 181 fpalssfswltwiapknvvlanlf....glgllpltfdwnviaayiGsglivplwvavnmliGavlswgiliPllyysngwypaylp............ 263
                 f+als f+w+twi p++ ++++lf    g++l p tfdwn i+ y+Gs+l+ p +++ n+li+ +l+++i+ + + ysn+wy +ylp            
  EPX72254.1 306 FTALSLFAWITWIKPNSPIVNQLFgestGISLVPVTFDWNSISGYLGSPLMSPASAIWNTLISTILFFWIVTAGVHYSNVWYGKYLPicsnsiidhfgn 404
                 *************************************************************************************************** PP

         OPT 264 .ydvteildedgvldyekyigyglmllaalvallylvqfaaitllivhtilkhgkdikaalksarsprteeddrhrrlmrkykdvpmwwylallvlslv 361
                  ydv++il+ d+ ld +++++y++ +++++ a++ +++fa++t++i+h++l++gkdi+++l++       ++d+h+rlm++y++vp wwy+ +++++++
  EPX72254.1 405 sYDVSRILTPDFRLDLKAFQEYSPLFMPSASAVSFGLSFASMTAAIFHVALYNGKDIWDRLRNP-----PKQDIHERLMEQYEEVPFWWYFTIFIVFFG 498
                 ***************************************************************9.....****************************** PP

         OPT 362 igiivvealftqlpvwglllalllafllaivsaiiaGltglnpvsgigkltqlifgallpgrpvanlvfgavvyaaaaqagdfmqDLKtGhllkasPra 460
                 +++ v++ ++t++p+w+++++l++a++++i++++i+++t++    g++++t++i+g++ pg+p+an++f++v+y++ aqa +f++DLK+Gh++k++P+ 
  EPX72254.1 499 MMMGVCYGWHTETPAWVVIVGLIIAIVWFIPIGVIYAITNV--ELGMNVFTEFIVGYMYPGHPLANMIFKTVGYITQAQALSFVSDLKLGHYMKIPPKM 595
                 *****************************************..******************************************************** PP

         OPT 461 qfvaqliGtlvgavvniavlkllvkaygdictadasnaftaPqakvfaavavl..lvggk.........kglpwafllgavapfilllllkkfpkksta 548
                 +f++q i+++++++v+i+vl + + +++++c +++ + +t+P+ak+f++ +v+  ++g++          gl++++l+g   ++++++l+kk+p ++++
  EPX72254.1 596 MFWTQTIASIWACFVQIGVLDWALGNIKNVCDPNQPDGYTCPSAKTFFNSSVIwgVIGPQrmfsghylyAGLQYFWLVGTLSTVLFWVLWKKWP-QKWW 693
                 ******************************************************999*************************************.**** PP

         OPT 549 rklplplafavgfylppsl...sialligglianlwlkrrdaewakkynyvlaaGLiaGealmgviiaflv 616
                  kl+ p++f+++++lpp++   ++  + +gl++n ++k+r  +w++kyn+ ++a+L++G  l+ ++i+f++
  EPX72254.1 694 GKLNAPIIFGGTGMLPPATptnYLVWCGIGLFFNHYIKNRFYDWWAKYNFNMSAALDTGMELALILIFFCL 764
                 *******************8874466888****************************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (808 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       992  (0.0553294); expected 358.6 (0.02)
Passed bias filter:                      469  (0.0261587); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.90u 0.34s 00:00:01.24 Elapsed: 00:00:00.55
# Mc/sec: 4451.18
//
Query:       EPX72255.1  [L=544]
Description: transcription factor Atf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.6e-10   39.2   4.5      1e-09   38.4   4.5    1.3  1  bZIP_1    bZIP transcription factor
    1.5e-06   28.2   4.9    2.7e-06   27.4   4.9    1.4  1  bZIP_2    Basic region leucine zipper
    2.1e-05   24.8   5.9      0.001   19.5   4.8    3.6  2  Aft1_OSA  Aft1 osmotic stress response (OSM) domain
  ------ inclusion threshold ------
      0.044   15.0   0.0      0.044   15.0   0.0    4.1  4  Aft1_HRR  Aft1 HRR domain
      0.064   13.8   3.8       0.15   12.6   3.8    1.5  1  bZIP_Maf  bZIP Maf transcription factor


Domain annotation for each model (and alignments):
>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.4   4.5   2.8e-13     1e-09       5      61 ..     452     508 ..     449     510 .. 0.92

  Alignments for each domain:
  == domain 1  score: 38.4 bits;  conditional E-value: 2.8e-13
                 XXXXXX--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 KrekrkqkNReaArrsRqRKqaeieeLerrvkaLekeNksLkseleelkkevekLks 61 
                 Kr+  +++NR aA ++RqRK++  ++L+ +v+   +eN+ L+ +++ l++e+ +Lk+
  EPX72255.1 452 KRKSFLERNRQAALKCRQRKKQWLSNLQAKVEFYGNENEILSAQVSALREEIVSLKT 508
                 5555579************************************************97 PP

>> bZIP_2  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   4.9   7.5e-10   2.7e-06      10      54 .]     458     502 ..     448     502 .. 0.90

  Alignments for each domain:
  == domain 1  score: 27.4 bits;  conditional E-value: 7.5e-10
                 XXXXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_2  10 rkNreAarrsRekkkakeeeleervkeLeeeNaqLrqkveqLeke 54 
                 ++Nr+Aa ++R++kk+   +l+ +v++  +eN+ L ++v++L+ e
  EPX72255.1 458 ERNRQAALKCRQRKKQWLSNLQAKVEFYGNENEILSAQVSALREE 502
                 39****************************************876 PP

>> Aft1_OSA  Aft1 osmotic stress response (OSM) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   4.8   2.8e-07     0.001      19      52 ..      60      89 ..      35      93 .. 0.64
   2 ?    1.7   0.0       0.1   3.6e+02      17      35 ..     243     261 ..     235     271 .. 0.64

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 2.8e-07
    Aft1_OSA 19 qqsdntpDYFssvhntgslslEPNPFEqSFgggs 52
                q+++ tp + +s     +l++EPNPFE SFg+++
  EPX72255.1 60 QPAGVTPSFVGSL----KLDFEPNPFEHSFGSTP 89
                4444444443333....599**********9887 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.1
    Aft1_OSA  17 qqqqsdntpDYFssvhntg 35 
                  + ++++ +DYF+ + ++ 
  EPX72255.1 243 SAGTNGEQSDYFGANAAVH 261
                 233444468***9886554 PP

>> Aft1_HRR  Aft1 HRR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   1.3       2.6   9.2e+03      31      60 ..      41      54 ..       6      66 .. 0.51
   2 ?   15.0   0.0   1.2e-05     0.044      47      70 ..     249     269 ..     225     270 .. 0.79
   3 ?   -2.3   1.5       2.9     1e+04      42      47 ..     299     304 ..     271     345 .. 0.51
   4 ?    1.4   0.3      0.22   7.7e+02      19      44 ..     394     421 ..     349     450 .. 0.75

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 2.6
    Aft1_HRR 31 PqeapngadavkaeakpasdpFdphDandA 60
                P               +++ p  + ++ndA
  EPX72255.1 41 P---------------STQAPQ-QSQSNDA 54
                1...............112221.2222333 PP

  == domain 2  score: 15.0 bits;  conditional E-value: 1.2e-05
    Aft1_HRR  47 pasdpFdphDandAAngLflLAqg 70 
                 ++sd+F+   an+A++gL+lL+q+
  EPX72255.1 249 EQSDYFG---ANAAVHGLCLLSQV 269
                 459****...9***********96 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 2.9
    Aft1_HRR  42 kaeakp 47 
                 ++++++
  EPX72255.1 299 QSQSQQ 304
                 222222 PP

  == domain 4  score: 1.4 bits;  conditional E-value: 0.22
    Aft1_HRR  19 kreatsnavtsqPqeapngadav...kae 44 
                 k+e +++   sqP+ ++n++++    +++
  EPX72255.1 394 KSE-NNEPQESQPRGMSNVSPSGspsETD 421
                 444.3556679999999998844233333 PP

>> bZIP_Maf  bZIP Maf transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   3.8   4.2e-05      0.15      35      80 ..     457     502 ..     438     509 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 4.2e-05
    bZIP_Maf  35 rlKNrgyakscrkrrlqqkeelekekeeleeelerlqqelsrlrqe 80 
                   +Nr +a +cr+r+ q   +l+++ e   +e+e l +++s+lr+e
  EPX72255.1 457 LERNRQAALKCRQRKKQWLSNLQAKVEFYGNENEILSAQVSALREE 502
                 579****************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (544 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       819  (0.0456802); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.76u 0.34s 00:00:01.10 Elapsed: 00:00:00.56
# Mc/sec: 2938.51
//
Query:       EPX72256.1  [L=284]
Description: C2 domain-containing protein Fic1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-15   57.6   0.0    1.8e-15   57.1   0.0    1.3  1  C2        C2 domain


Domain annotation for each model (and alignments):
>> C2  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.1   0.0     1e-19   1.8e-15       1     103 []       7     109 ..       7     109 .. 0.94

  Alignments for each domain:
  == domain 1  score: 57.1 bits;  conditional E-value: 1e-19
                 TEEEEEEEEEESSSSSSTTSSCEEEEEEEEECEEEEEE-SCSSSSS.SEEEEEEEEEESCHTTSEEEEEEEEECSSSTEEEEEEEEEEGHHHHTTHHHH CS
          C2   1 gklevtvieAknLpnkdkkgssdpyvkvsldgkqkakTrviknsln.PvWnekftfevaeleeakLeveVfdndrlskddfiGkveiplstllsgeeae 98 
                 g+l v++ +AknLpnk   g+ +py+++ + g+ +++T++ k+s + P Wn  ++f+++ ++   ++v V+++   ++ +++G + +++++ l++  ++
  EPX72256.1   7 GTLIVRIANAKNLPNKALIGKQNPYCSCRV-GELVKRTHTDKRSGQaPSWNAVLEFPIRSESYNIMKVYVYHQGFRKHAHLVGDTVLSFQKALNQGDQS 104
                 6899************99************.********99888666*************************99977777******************* PP

                 EEEEH CS
          C2  99 gwypl 103
                 +wy+l
  EPX72256.1 105 QWYEL 109
                 ***87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (284 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       328  (0.0182944); expected 358.6 (0.02)
Passed bias filter:                      238  (0.0132746); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.33s 00:00:00.94 Elapsed: 00:00:00.54
# Mc/sec: 1576.92
//
Query:       EPX72257.1  [L=148]
Description: transcriptional coactivator [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      6e-22   77.9   0.5      6e-22   77.9   0.5    2.1  2  MBF1      Multiprotein bridging factor 1
    2.5e-11   43.4   0.1    5.5e-11   42.3   0.1    1.6  2  HTH_3     Helix-turn-helix
      4e-05   23.9   0.1    9.4e-05   22.7   0.1    1.6  2  HTH_31    Helix-turn-helix domain
  ------ inclusion threshold ------
      0.021   14.8   0.1      0.037   14.0   0.1    1.4  1  HTH_37    Helix-turn-helix domain
      0.022   14.8   0.1      0.037   14.1   0.1    1.3  1  HTH_19    Helix-turn-helix domain


Domain annotation for each model (and alignments):
>> MBF1  Multiprotein bridging factor 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.9   0.5   1.7e-25     6e-22       1      71 [.       2      73 ..       2      74 .. 0.95
   2 ?    0.1   0.4      0.32   1.1e+03      23      43 ..      76      93 ..      72     130 .. 0.69

  Alignments for each domain:
  == domain 1  score: 77.9 bits;  conditional E-value: 1.7e-25
        MBF1  1 qDWdsvtvigkkar...katvaksesalnaArRsGavvetekKfaagtNkaskaqegqnlaKlDreteelkpkk 71
                +DWds ++ig++a    + +vak++s++n ArR+Ga++ tekK ++++N+a+ +  gq+l+K+Dre+e+ +p +
  EPX72257.1  2 SDWDSNITIGSRAGpgaRTHVAKTQSQINSARRAGAIIGTEKK-YGSGNRAQDP-SGQHLTKIDRENEVKPPST 73
                6*************9**99************************.99****8877.**************99976 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.32
        MBF1 23 salnaArRsGavvetekKfaa 43
                  + +A ++G +   ekK+a 
  EPX72257.1 76 RSVAQAIQKGRQ---EKKWAQ 93
                556666666665...666543 PP

>> HTH_3  Helix-turn-helix
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       2.3   8.3e+03      35      45 ..      53      63 ..      50      70 .. 0.75
   2 !   42.3   0.1   1.5e-14   5.5e-11       1      53 [.      82     134 ..      82     136 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 2.3
                CSBHHHHHHHH CS
       HTH_3 35 nPsletlkkla 45
                 Ps + l k+ 
  EPX72257.1 53 DPSGQHLTKID 63
                58888888885 PP

  == domain 2  score: 42.3 bits;  conditional E-value: 1.5e-14
                 HHHHHHHTTHHHHHHHHHHTSSHHHHHHHHTTSSCSBHHHHHHHHHHHTSEHH CS
       HTH_3   1 lkelRkqlglsqeeLAeklGvsrstisriEnGernPsletlkklakaLgvsld 53 
                 +++ R+++++ q++LA++++ +++ ++++E G++ P++++l k+++aLgv+l+
  EPX72257.1  82 IQKGRQEKKWAQKDLAQRINEKPQVVNDYEGGRAVPNQQVLTKMERALGVKLR 134
                 5678**********************************************985 PP

>> HTH_31  Helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       2.4   8.7e+03      39      52 ..      52      64 ..      47      73 .. 0.72
   2 !   22.7   0.1   2.6e-08   9.4e-05      10      56 ..      86     131 ..      77     136 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 2.4
      HTH_31 39 rgrpspavlealar 52
                +  ps + l+++ r
  EPX72257.1 52 Q-DPSGQHLTKIDR 64
                3.488888877765 PP

  == domain 2  score: 22.7 bits;  conditional E-value: 2.6e-08
      HTH_31  10 ReraGLsqeevAerlgvsestlsrlEqGrrgrpspavlealaralgl 56 
                 R++  + q+++A+r++  +  ++++E Gr  +p  +vl+++ ralg+
  EPX72257.1  86 RQEKKWAQKDLAQRINEKPQVVNDYEGGRA-VPNQQVLTKMERALGV 131
                 9999**************************.7**************8 PP

>> HTH_37  Helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.1     1e-05     0.037      17      45 ..      76     104 ..      62     115 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1e-05
                 HHHHHHHHHHHHHCT--HHHHHHHHT--H CS
      HTH_37  17 aqlalaiaeliekrelsqseaaqllgiaq 45 
                 +++a+ai++ +++++++q+++aq+ + + 
  EPX72257.1  76 RSVAQAIQKGRQEKKWAQKDLAQRINEKP 104
                 68999*******************99764 PP

>> HTH_19  Helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.1     1e-05     0.037       2      54 ..      80     131 ..      79     134 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 1e-05
      HTH_19   2 erLkeaReelgltqeelaerlgisrskisaiEngkkdvpsaelllkiaealgi 54 
                 + +++ R e+++ q++la+r+   +   + +E+g+  vp+  +l k  +alg+
  EPX72257.1  80 QAIQKGRQEKKWAQKDLAQRINEKPQVVNDYEGGRA-VPNQQVLTKMERALGV 131
                 678899*****************************9.9998888777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       755  (0.0421105); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.42u 0.29s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1037.85
//
Query:       EPX72258.1  [L=563]
Description: eukaryotic protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   4.5e-120  401.6   0.0   6.5e-120  401.1   0.0    1.2  1  DUF3808     Protein of unknown function (DUF3808)
     0.0065   16.5   1.0        0.8    9.8   0.0    3.1  3  DUF2892     Protein of unknown function (DUF2892)
  ------ inclusion threshold ------
      0.058   12.5   0.1        0.1   11.6   0.1    1.4  1  XK-related  XK-related protein


Domain annotation for each model (and alignments):
>> DUF3808  Protein of unknown function (DUF3808)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  401.1   0.0  1.1e-123  6.5e-120       2     477 .]      18     475 ..      17     475 .. 0.94

  Alignments for each domain:
  == domain 1  score: 401.1 bits;  conditional E-value: 1.1e-123
     DUF3808   2 qaldlvLndkfeeaeellkeaskeSslhalgrgviafleAvltfepekmkkAsealkeaeklceksrkkaqkneskqnlssdslyepgleaevcyaeal 100
                 ++l+++L+dk++ea + ++   ++ s+h  g++vi+f++Avltfep ++ +++e+++ a k+  ++++ a kn+    +   ++++pg+e++v+++ +l
  EPX72258.1  18 RGLNYILDDKMDEAVKIFN--YGNTSFHLSGQAVISFIQAVLTFEPFRFGESQEKIDLAIKALTEDKDFAAKND---LY--LCTFDPGIEYRVSIGLML 109
                 79****************8..66779************************************************...55..699*************** PP

     DUF3808 101 LlkAlLtflseslvefiKgglklRkaYqiykeilkeikklekkkrskteeeeesllseeknsqaeideflesGvnlgfGilqlviSllPpailklLsvv 199
                 Ll+Al++f+ses+v+++K+++klRka+ i+++i+k++ ++ +k  ++       +++++    ++++e++++G+ l++G+++l+iSllPp+++++Ls++
  EPX72258.1 110 LLSALIGFCSESIVTSVKSVYKLRKAHGIFNKINKRHFESFTKGFQS-------TNNKD---IDTVNEYVQTGTLLCTGLFTLLISLLPPKMITILSLL 198
                 **************************************888555553.......22333...459********************************** PP

     DUF3808 200 GFsGdreeGLrlLwe.ask.srnlraalallaLlfYytgvvqvldi.....ddg.lkapleeleelLlksrkrfPksalwllfearieslkgnldeAle 290
                 G++Gdr+++L+ +w+ a +    + aa+a+ aL++Yy+g+vq+++i     + +  ++p +++ elL k+r+ +P++ +w l+ea+++s+ ++++eA++
  EPX72258.1 199 GYKGDRDMALNYMWKpALQrPSGFFAAVAFAALIQYYSGAVQLCSIyrvtpS-EpDGWPVHRCFELLSKIRETHPDGPMWPLHEAKLLSMVKKQTEAIH 296
                 ***************77775678***********************877531.2468****************************************** PP

     DUF3808 291 lleeiieesqselkqvkhlclfelaltlvylheykeaaesfleLlklskwSkalYtYlaaacllelgreekkaeakekaeelfkevpkllqkkagkslp 389
                 +l++++++   +l q++ l++fe+al ++++h+y ++a+sf +L++l++ S  lY+Y+aaac+l++++ +++ ea  +a++l++ ++k l++   k++p
  EPX72258.1 297 VLNDLMAKPPPKLMQLEVLIVFEHALDCAFSHRYIDGAKSFMKLSSLNDSSAGLYSYFAAACFLQDVQAHANVEALMSASQLLEPLDKQLTD---KTAP 392
                 ****************************************************************************************9999...**** PP

     DUF3808 390 lekFilrKverfkarkke..kkselldavlvspvlEliYvwngfsrmskeeleeesvkkleekaankeseeeeDdellkkLLkglvlrrl 477
                 l+k+i rKv+++ +r+++  +++ l+++v++sp++EliYvwngf+rm  eel++ +v+++  ++       +e d+++++L+k++  r+l
  EPX72258.1 393 LDKYIRRKVRKLCERRASvgNQGGLAEYVGFSPLYELIYVWNGFRRMNLEELSQFDVDRVHPWQ-------DEGDDICQALVKATLWRNL 475
                 ***************99999999*************************************9993.......5578889*******99986 PP

>> DUF2892  Protein of unknown function (DUF2892)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0   0.00013       0.8      38      52 ..     104     118 ..     101     128 .. 0.89
   2 ?    3.7   0.1     0.011        66      32      57 ..     222     247 ..     206     251 .. 0.81
   3 ?   -2.3   0.0      0.77   4.6e+03      49      58 ..     421     430 ..     420     434 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00013
     DUF2892  38 lvGavllltgltgfC 52 
                  +G++lll++l+gfC
  EPX72258.1 104 SIGLMLLLSALIGFC 118
                 59************* PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.011
     DUF2892  32 wgwllglvGavllltgltgfCplyal 57 
                 ++  +++++++   +g++  C +y++
  EPX72258.1 222 FFAAVAFAALIQYYSGAVQLCSIYRV 247
                 366689999999************97 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 0.77
     DUF2892  49 tgfCplyall 58 
                 +gf ply l+
  EPX72258.1 421 VGFSPLYELI 430
                 79*****997 PP

>> XK-related  XK-related protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   1.7e-05       0.1      17     178 ..     161     353 ..     159     377 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 1.7e-05
  XK-related  17 dvvlaveYysngdyvwfg.ltllfvllpslvvqlfsllwykedrskkkskee...............lkswllvlllhllql................. 82 
                 d+ ++ eY ++g  ++ g +tll+ llp  +++++sll yk dr+    + +                       +  l+q                  
  EPX72258.1 161 DIDTVNEYVQTGTLLCTGlFTLLISLLPPKMITILSLLGYKGDRDMAL-NYMwkpalqrpsgffaavA-------FAALIQYysgavqlcsiyrvtpse 251
                 6667889*****9987662699999********************987.4447899988855544440.......344444455555555556667777 PP

  XK-related  83 ...gvlwrylealylgiksrkkkeskeeeeereyyerkllkeeadlsmlrlleaflesaPqlvLqlyillqtg........seevsvlqavsavlSlvs 170
                     ++ r++e+l   i+    + + +   +  ++ ++l + +++   +++l  +++  P  ++ql +l+  +        +++++  + +  + Sl  
  EPX72258.1 252 pdgWPVHRCFELLSK-IR----ETHPDGPMWPLHEAKLLSMVKKQTEAIHVLNDLMAKPPPKLMQLEVLIVFEhaldcafsHRYIDGAKSFMKLSSLND 345
                 775567799999983.33....22335566667777899999999999*************99999999987767776666555555555555555555 PP

  XK-related 171 lawalvsy 178
                  + +l sy
  EPX72258.1 346 SSAGLYSY 353
                 55555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (563 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       538  (0.0300073); expected 358.6 (0.02)
Passed bias filter:                      480  (0.0267723); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.30s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 3804.80
//
Query:       EPX72259.1  [L=391]
Description: ribosome biogenesis protein N [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.02   14.2   0.1       0.06   12.6   0.0    1.7  2  UPF0300   Uncharacterised protein family (UPF0300)
      0.059   11.7   5.0      0.081   11.2   5.0    1.1  1  CDC45     CDC45-like protein


Domain annotation for each model (and alignments):
>> UPF0300  Uncharacterised protein family (UPF0300)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1      0.17   1.6e+03     125     147 ..      87     108 ..      43     111 .. 0.57
   2 ?   12.6   0.0   6.7e-06      0.06     126     210 ..     292     374 ..     273     376 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.17
     UPF0300 125 ieelasvaeseeelgWLllllsi 147
                 i e as+++ +   gWL++ ls 
  EPX72259.1  87 I-ENASIVSFQYAHGWLMIALSS 108
                 2.234555556666777776665 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 6.7e-06
     UPF0300 126 eelasvaeseeelgWLllllsigsnasafPihaYlnakkkllesklpesllllrkeDellfqdkeeieeleellkelledlakce 210
                 + +  +a+s ++l  L+ ++ ++++ +++ +h   n  ++ + +++p+s+lll+++De++ +++ee+++ +e ++++ +++++++
  EPX72259.1 292 QGVKGSASSIHNLNDLVAIVGLDRHLRVYDVHR--NHLANAYVKVMPTSVLLLNDRDEEVIKEEEEKRVAKEEEEDIWRNMEQLD 374
                 556667788888888999999999999999997..45569999**************************9999999999888776 PP

>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   5.0   9.1e-06     0.081      67     155 ..     306     386 ..     298     391 .] 0.67

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 9.1e-06
       CDC45  67 dleelleleegvevyViDshRPwnleNlfgsseekerivvfDDgdieeeleeereayealeeeeesdeedeeeeeeddddeeeeeeeee 155
                 dl ++++l+++ +  V D hR  +l+N + +    ++++ ++D d ee ++ee+e+  a eeee+  ++ e   + dd++e++++++++
  EPX72259.1 306 DLVAIVGLDRHLR--VYDVHRN-HLANAYVK-VMPTSVLLLNDRD-EEVIKEEEEKRVAKEEEEDIWRNME---QLDDKEEKKDDRKTK 386
                 6677777766555..55****6.99***965.6799*********.8999999998888888888863332...222222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (391 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1300  (0.0725082); expected 358.6 (0.02)
Passed bias filter:                      555  (0.0309554); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 2832.41
//
Query:       EPX72260.1  [L=358]
Description: DNA replication factor C complex subunit Rfc5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-12   48.0   0.5    1.8e-12   47.4   0.1    1.6  2  DNA_pol3_delta2  DNA polymerase III, delta subunit
    1.9e-07   31.5   1.1    2.2e-06   28.1   0.3    2.7  3  AAA              ATPase family associated with various cellul
    1.4e-05   25.1   0.1      4e-05   23.6   0.0    1.8  1  Rad17            Rad17 P-loop domain
    0.00051   19.9   1.8    0.00096   19.0   1.8    1.4  1  DNA_pol3_delta   DNA polymerase III, delta subunit
     0.0036   17.7   0.7      0.065   13.6   0.7    2.4  1  AAA_16           AAA ATPase domain
     0.0061   17.1   0.0      0.011   16.2   0.0    1.7  1  ABC_tran         ABC transporter
  ------ inclusion threshold ------
      0.019   15.3   0.7       0.22   11.8   0.2    2.7  2  AAA_22           AAA domain
      0.025   13.5   0.1      0.038   12.9   0.1    1.5  1  NatB_MDM20       N-acetyltransferase B complex (NatB) non cat
      0.067   12.9   1.0       0.27   10.9   1.0    1.8  1  AAA_24           AAA domain
      0.076   12.8   1.4        7.3    6.4   0.8    2.6  2  Bac_DnaA         Bacterial dnaA  protein


Domain annotation for each model (and alignments):
>> DNA_pol3_delta2  DNA polymerase III, delta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.4   0.1   9.8e-16   1.8e-12       3     159 ..      19     183 ..      17     187 .. 0.80
   2 ?   -3.4   0.0         4   7.1e+03       6      24 ..     192     211 ..     189     240 .. 0.57

  Alignments for each domain:
  == domain 1  score: 47.4 bits;  conditional E-value: 9.8e-16
  DNA_pol3_delta2   3 eealkilskalksgrlahayLfeGdegigkkelalnlakallceeknetk........pcgecksckkieqgkhpDvivi.....eteekersi 83 
                      ++  + l + ++++++ h +L++G++g+gkk+ + ++ ++l    +++ k        p     s +ki+ + ++ +++i     +  + +r++
       EPX72260.1  19 KQLSERLISLAATNEFPH-LLIYGPSGAGKKTRTVAILRELYGPGAEKLKidqrtfltP-----SNRKIQINIVSSLHHIeitpsDVGNYDRVV 106
                      566777888888888888.79********************998887776555444444.....555555555555555544443666677799 PP

  DNA_pol3_delta2  84 kldqirelieelsrkpre.skkkiiiiedaekmtksAaNalLktlEEPsenaifiLitsdtnklLktirSRcqelkf 159
                        + ++++ ++++   +   + k++ii+ a+++t+ A+ al +t+E  s+n+ +iL++++t+k++++irSR+  +++
       EPX72260.1 107 MQELLKDIAQSAQVDLQAkKRFKVVIINVADELTRDAQAALRRTMEKYSNNIRLILVANSTSKIIEPIRSRTLMVRV 183
                      9999999999988776654788**************************************************99876 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 4
  DNA_pol3_delta2   6 lkilskalksgrla.hayLf 24 
                      +k++s++l++++l+  a L+
       EPX72260.1 192 IKVMSQILATQELEaPASLL 211
                      56666666665553133333 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0       1.2   2.2e+03      90     113 ..      12      35 ..       9      38 .. 0.80
   2 !   28.1   0.3   1.2e-09   2.2e-06       1     124 [.      37     178 ..      37     186 .. 0.71
   3 ?    1.4   0.0      0.22   3.9e+02      23      74 ..     188     239 ..     177     250 .. 0.69

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 1.2
                 HHHHHHTTTSSSTEEEEEEESSGG CS
         AAA  90 lteldgvkkkeskvivigatnrpd 113
                 l+ ld  k+ ++++i ++atn+  
  EPX72260.1  12 LSSLDYHKQLSERLISLAATNEFP 35 
                 5678888888999********954 PP

  == domain 2  score: 28.1 bits;  conditional E-value: 1.2e-09
                 EEEESSTTSSHHHHHHHHHHHH...THEEEEEETTTCSSS..........................STTHHHHHHHHHHHHHHHTS...TS.EEEEEET CS
         AAA   1 vllyGppGtGKTllakavakel...gvefleisgsellsk..........................yvgesekkirelfkeakeka...kp.silfiDE 66 
                 +l+yGp G GK +   a+ +el   g+e l+i+  ++l                                +++ ++++ ++a+      k  ++++i  
  EPX72260.1  37 LLIYGPSGAGKKTRTVAILRELygpGAEKLKIDQRTFLTPsnrkiqinivsslhhieitpsdvgnyDRVVMQELLKDIAQSAQVDLqakKRfKVVIINV 135
                 699******************85553444444444444223344444444444455555555555545555555666666664444555455******* PP

                 GGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTSSSTEEEEEEESSGGGSTHHHHSTTS CS
         AAA  67 idalaksrsgseseeeervvnqLlteldgvkkkeskvivigatnrpdkldpallrgRf 124
                 +d+l+++            +++L + ++++++   ++ +i+++n+ +k+ ++++ +R 
  EPX72260.1 136 ADELTRDA-----------QAALRRTMEKYSN---NIRLILVANSTSKIIEPIR-SRT 178
                 ****9888...........************9...6******************.785 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.22
                 THEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHH CS
         AAA  23 gvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr 74 
                 +++++++    l  + +++ ++ ++++ ++++++ ++ il+++ i+a  +++
  EPX72260.1 188 ESDIIKVMSQILATQELEAPASLLEKIANNCSRNLRKAILLLETIHAKSPHN 239
                 66666666666666677788889999999988777779****9999987776 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   0.0   2.2e-08     4e-05       8     160 ..       2     155 ..       1     179 [. 0.74

  Alignments for each domain:
  == domain 1  score: 23.6 bits;  conditional E-value: 2.2e-08
       Rad17   8 lWfekykPekaeelavhkkkieevkewlkadvLesrkkriLLisGPsGCgkst.vvkvLskelgiklre.wlnpvslkepdnqksdfk..gltekesrf 102
                 lW+++y+P+++  l  hk+  e +     ++  +      LLi GPsG gk t +v +L   +g+  ++  ++  ++  p+n+k ++   + ++  +  
  EPX72260.1   2 LWLDQYRPKTLSSLDYHKQLSERLISLAATNEFP-----HLLIYGPSGAGKKTrTVAILRELYGPGAEKlKIDQRTFLTPSNRKIQINivSSLHHIEIT 95 
                 6****************98666655544444444.....48*********8775899999999998765368899999999977654411555555556 PP

       Rad17 103 lsqiesfkeleLkdakylklqklGddlrtdkkl.ilvedlPnkfyrds.dalrevirkyl 160
                  s +  +  + +++      q    dl+++k++ +++ ++ ++  rd+  alr  + ky 
  EPX72260.1  96 PSDVGNYDRVVMQELLKDIAQSAQVDLQAKKRFkVVIINVADELTRDAqAALRRTMEKYS 155
                 889999999988888887888888999999988556678888888888566777766663 PP

>> DNA_pol3_delta  DNA polymerase III, delta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   1.8   5.4e-07   0.00096      59     165 ..     129     225 ..     103     232 .. 0.89

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 5.4e-07
                     EEEEEE--.....TT-S-TTHHHHHHHHTTT--SSEEEEEEES.S--HHHHHHHHHTTTEEEEEE----TTTHHHHHHHHHHHTT-EE-HHHHHH CS
  DNA_pol3_delta  59 rivvlknpklltkesklnekllkeLeeylsnlpedtlLiliapkklderkklvklLkkkatvveaktlkeeelkkwiqkraqelglkiekealel 153
                     ++v+++ +      + l+ + +++L +++++++ ++ Lil+a+    +  k++  + +++ +v++  ++e++++k  +++++++ l+  +  le 
      EPX72260.1 129 KVVIINVA------DELTRDAQAALRRTMEKYSNNIRLILVAN----STSKIIEPIRSRTLMVRVAAPSESDIIKVMSQILATQELEAPASLLEK 213
                     46666666......779999***********************....677999****************************************** PP

                     HHHHHTT-HHHH CS
  DNA_pol3_delta 154 Llelvennlsai 165
                     ++ +++ nl+ +
      EPX72260.1 214 IANNCSRNLRKA 225
                     ********9865 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.7   3.6e-05     0.065      13     133 ..      23     142 ..      17     251 .. 0.52

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 3.6e-05
      AAA_16  13 lsalervrsgrpelvllsGesGvGK.sslvrellralekd........ggiflrgkcdqlesaipysa.laqalareellrqlldeaesaeleawrekl 101
                 +++++ +++++ + +l++G+sG GK ++ v ++lr+l +                ++   +s++  ++ +++ l   + ++   ++  + ++   +e l
  EPX72260.1  23 ERLISLAATNEFPHLLIYGPSGAGKkTRTV-AILRELYGPgaeklkidQ------RTFLTPSNRKIQInIVSSL---HHIEITPSDVGNYDRVVMQE-L 110
                 566666778888************736666.555566666233333321......3333344444344444444...34444444433322222222.2 PP

      AAA_16 102 eealaavpelagaeasrllellkrllallsrd 133
                 ++ +a++++++ ++++r+  ++ + ++ l+rd
  EPX72260.1 111 LKDIAQSAQVDLQAKKRFKVVIINVADELTRD 142
                 22222333344443444444444433333332 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   6.3e-06     0.011      13      85 ..      36     128 ..      29     263 .. 0.79

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 6.3e-06
                 EEEEEESTTSSHHH.HHHHHTTSS--SEEEEEETTCEGGG.......B-HHHCCHCEEEE-SS--S-TTSBHHHH............HHHTCH CS
                 xxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxx............xxxxxx RF
    ABC_tran  13 kvaivGenGaGKSt.LlkllagllkpteGeilldgkdlke.......qeleslrkeigvlpqepqlfpeltvren............esdeei 85 
                  + i G++GaGK t  +++l +l+ p ++++++d++ + +       +++ s+ ++i++ p +    +++ ++e             ++++++
  EPX72260.1  36 HLLIYGPSGAGKKTrTVAILRELYGPGAEKLKIDQRTFLTpsnrkiqINIVSSLHHIEITPSDVGNYDRVVMQELlkdiaqsaqvdlQAKKRF 128
                 5789*******855278888889999********99998866666666666666666666666655555544444777766666666333333 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.2   0.00012      0.22       7     128 ..      36     163 ..      32     170 .. 0.65
   2 ?    1.1   0.0      0.25   4.5e+02      44      80 ..     182     224 ..     164     327 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00012
      AAA_22   7 ilvvtGesGtGK.Ttllrrlleqldeeakaeeerpevvfvtlpsst....sskdllrellralglelka...........erlsseellealeqalrar 89 
                 +l+++G+sG+GK T++++ l+e +         +p+  + ++ + t    s +++  ++++ l++   +               ++++ +  +  l+a+
  EPX72260.1  36 HLLIYGPSGAGKkTRTVAILRELY---------GPGAEKLKIDQRTfltpSNRKIQINIVSSLHHIEITpsdvgnydrvvMQELLKDIAQSAQVDLQAK 125
                 799********6488888888888.........555555555555544566666677777777765555777766655543333333333333334444 PP

      AAA_22  90 avielliiDEaqhlrseealeeLrsllnlsrkgvqliLv 128
                 ++ +++ii  a+ l + +a   Lr+ ++  + +++liLv
  EPX72260.1 126 KRFKVVIINVADEL-TRDAQAALRRTMEKYSNNIRLILV 163
                 44778899888888.888888887777767777777777 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.25
      AAA_22  44 fvtlpsstsskdllrellralglelka......erlsseelle 80 
                 +v +ps+++  ++++++l   +le+ a      +++ s+ l++
  EPX72260.1 182 RVAAPSESDIIKVMSQILATQELEAPAsllekiANNCSRNLRK 224
                 5555555566666666666666555553333332222222222 PP

>> NatB_MDM20  N-acetyltransferase B complex (NatB) non catalytic subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   2.1e-05     0.038     196     229 ..     210     242 ..     108     243 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2.1e-05
  NatB_MDM20 196 lldlseksvdstlliqaillLeflltksphNfql 229
                 ll+   + + s +l +aillLe+ ++ksphN ql
  EPX72260.1 210 LLEKIAN-NCSRNLRKAILLLETIHAKSPHNRQL 242
                 4444443.56889******************986 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   1.0   0.00015      0.27       5      93 ..      37     155 ..      34     160 .. 0.66

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00015
      AAA_24   5 iliyGpsgiGK.Ttlakel....gpkplfidtekGlksldadkfpdie............................swedfldevvel....aaelady 66 
                 +liyGpsg+GK T +++ l    g        ek   ++d + f +++                             ++++l+++++      ++++++
  EPX72260.1  37 LLIYGPSGAGKkTRTVAILrelyG-----PGAEK--LKIDQRTFLTPSnrkiqinivsslhhieitpsdvgnydrvVMQELLKDIAQSaqvdLQAKKRF 128
                 79********73666666655552.....34444..34444444444433333335555556666666666677775666666666657777888999* PP

      AAA_24  67 ktlviDtideleelclaevirqnekae 93 
                 k+++i  +del + + a ++r  ek +
  EPX72260.1 129 KVVIINVADELTRDAQAALRRTMEKYS 155
                 *****************9998888744 PP

>> Bac_DnaA  Bacterial dnaA  protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0     0.017        30      25      49 ..      25      49 ..      18      94 .. 0.84
   2 ?    6.4   0.8    0.0041       7.3     158     205 ..     178     225 ..     106     238 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.017
                HHHHSTTT.S--EEEE-SSSSSHHH CS
    Bac_DnaA 25 kvaeapgkkynPlfiygevGlGktH 49
                 ++ a+ +++  l+iyg++G Gk  
  EPX72260.1 25 LISLAATNEFPHLLIYGPSGAGKKT 49
                577788899999**********964 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0041
                 SEEEE-----HHHHHHHHHHHHHHTT----TTHHHHHHHH--S-HHHH CS
    Bac_DnaA 158 GlvvdieppdletrlailkkkieaeklevpeevlefiaervtdnvRel 205
                  l+v +  p +   ++++ + + +++le p  +le ia++ ++n+R+ 
  EPX72260.1 178 TLMVRVAAPSESDIIKVMSQILATQELEAPASLLEKIANNCSRNLRKA 225
                 5889999999999999*****************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       661  (0.0368676); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.54u 0.29s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 2519.43
//
Query:       EPX72261.1  [L=294]
Description: tricarboxylic acid transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.7e-31  106.1   3.2    1.8e-14   53.4   0.0    3.2  3  Mito_carr  Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.1   8.9e-10   1.6e-05       6      82 ..      11      81 ..       6      90 .. 0.75
   2 !   27.1   0.4   1.6e-10   2.9e-06       8      90 ..     100     188 ..      95     196 .. 0.78
   3 !   53.4   0.0     1e-18   1.8e-14       3      94 ..     203     292 ..     201     294 .] 0.91

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 8.9e-10
                HHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHH CS
   Mito_carr  6 lkellaGglagav.atlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalk 82
                +++ll G+   ++ ++++ +Pl+v K+++ ++++++       + +vlk+i+   G++g+y+Gl+p     a+++++ 
  EPX72261.1 11 AANLLLGAGLNLFeTSSLGHPLEVTKVQMAANRTQT-------MEQVLKSILSRGGILGFYQGLIPWAWIEASTKGAV 81
                4445555444444378899********999999886.......558*******************9777666666554 PP

  == domain 2  score: 27.1 bits;  conditional E-value: 1.6e-10
                 HHHHHHHHHHHHHHH.HHHHHHHHHHHHHCCCSSTTTSCSS.....HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   8 ellaGglagavatlv.ttPldvvKtrlqtqkksskksksaa.....ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlk 90 
                 + +aG+lag++++++ ++ +  + t + t++ + +k+  ++     +++v+  +yke+G+rg  rG+++  lr++++++ +f+l  ++ 
  EPX72261.1 100 STAAGALAGMGGGIAqAYATMGLCTCMKTAEVTRAKQAATGvpvpsTFRVFADLYKEKGIRGINRGVNAVALRQMSNWGSRFALSRFFE 188
                 5677777777777662344555667777777777666655588999************************************9876654 PP

  == domain 3  score: 53.4 bits;  conditional E-value: 1e-18
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
   Mito_carr   3 lsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlll 94 
                 l+++++++a++++ga+ ++  +P++v+++ +q+ ++ s++s  ++i+ +++++y ++G++glyrG++p++   a +++++++l ++++ ++ 
  EPX72261.1 203 LTPAQRFVASVTGGAL-SCWNQPVEVARVEMQSLSNGSQNSS-RGIVATIRSVYDSNGIKGLYRGVVPRMGLGAYQTVIMVFLADSIRSFFD 292
                 6788999999999999.6999************999988765.45******************************************99985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (294 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       428  (0.0238719); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 2285.89
//
Query:       EPX72262.1  [L=453]
Description: triose phosphate transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.5e-57  194.0  18.2    4.6e-57  193.6  18.2    1.1  1  TPT             Triose-phosphate Transporter family
    1.2e-12   48.2  30.0    1.2e-07   32.0  10.9    2.4  2  EamA            EamA-like transporter family
    4.6e-06   26.1  18.6    4.4e-05   22.8  18.6    2.1  1  UAA             UAA transporter family
     0.0023   17.6   0.2      0.033   13.8   0.0    2.3  2  Wzy_C           O-Antigen ligase
  ------ inclusion threshold ------
      0.011   16.4   1.5      0.011   16.4   1.5    3.2  4  Multi_Drug_Res  Small Multidrug Resistance protein
        0.3   11.1   7.6        2.7    8.1   1.4    2.6  2  TMEM234         Putative transmembrane family 234


Domain annotation for each model (and alignments):
>> TPT  Triose-phosphate Transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  193.6  18.2   1.5e-60   4.6e-57       4     289 ..      19     311 ..      16     312 .. 0.91

  Alignments for each domain:
  == domain 1  score: 193.6 bits;  conditional E-value: 1.5e-60
         TPT   4 gllfllWYllnvvfnilnKkilnvfpyPltvsavqllvgsvlilvlwal.glkk....rpkisseflkailplalvktlghvlavvslskvaVSfthtv 97 
                  +l+llWYl++ v+n   K i+n +  P+t++ +q+     +++v++ + ++      ++k s+ +l++ lpl+++++ ghv++ ++ ++++VS  htv
  EPX72262.1  19 IFLCLLWYLCSAVTNTSSKSIFNDVRCPVTLTFLQFGFVAFFSAVCLLIrQFFGngngIQKPSKLVLSTTLPLSVFQIGGHVFGSLATTRIPVSTVHTV 117
                 689********************************99988888887766333223333566666699******************************** PP

         TPT  98 KasePiFtvilsrlllgeklsllvylsLlpivgGvalasvtElsFnligfisAlisnltfslrnifsKkllkklkd.........ldalnlfaiitils 187
                 Ka+ P+Ftv+  r+l+++++s + y sL+p+  Gv+la   Els +l+g++ Alis+++f+++nif Kk++++ k+          ++lnl+ + + ++
  EPX72262.1 118 KALSPLFTVLAYRFLFQHSYSSTAYFSLVPLTLGVTLACSFELSADLCGLFYALISTFIFVSQNIFGKKIFTEAKKhgnaskkshYNKLNLLLYSSGMA 216
                 *************************************************************************544589999999999*********** PP

         TPT 188 lllllPvallvegvlktpsllkstkvslkevllllllsgvlfhlynqvaymvLervspvthsvantvKrvvvIvlsvlvfknpvsllnaiGtavaivGv 286
                 +l+++Pv+l  eg+   p+         + v+++++ +g+ ++++n++a+++L+ +spv++s+a+ +Kr++vIv+s+l f++p sl +a+G +++ vG 
  EPX72262.1 217 FLVMIPVWLHQEGFEYLPVAG-------SPVFFNVIHNGLSHFFQNILAFTLLSIISPVAYSIASLIKRIFVIVVSILWFRQPTSLTQAMGIVLTAVGL 308
                 *************54444332.......568******************************************************************** PP

         TPT 287 flY 289
                 +lY
  EPX72262.1 309 YLY 311
                 *** PP

>> EamA  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8  11.1   5.6e-08   0.00017       4     134 ..      19     154 ..      16     157 .. 0.83
   2 !   32.0  10.9   3.9e-11   1.2e-07       3     134 ..     166     310 ..     164     311 .. 0.91

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 5.6e-08
        EamA   4 illallaalfwaiyfvlskillrkv.spltltfvrfliagillliiallkegkl....aklslkdwlll.lllgllgtvlafllffyalkktsasnasl 96 
                 i+l+ll  l++a++ + sk ++++v  p+tltf++f + +++  + +l+++        + + k +l+  l l+++ +  ++++   a +++++s++  
  EPX72262.1  19 IFLCLLWYLCSAVTNTSSKSIFNDVrCPVTLTFLQFGFVAFFSAVCLLIRQFFGngngIQKPSKLVLSTtLPLSVFQI-GGHVFGSLATTRIPVSTVHT 116
                 7899*****************99997799****999977777655555554444444445555555555477777665.6789**************** PP

        EamA  97 itslePvftlilsvlllgekltlkqllgivlillGvll 134
                 + +l+P+ft++   +l++ + +++ ++++v   lGv l
  EPX72262.1 117 VKALSPLFTVLAYRFLFQHSYSSTAYFSLVPLTLGVTL 154
                 ************************************98 PP

  == domain 2  score: 32.0 bits;  conditional E-value: 3.9e-11
        EamA   3 gillallaalfwaiyfvlskillrkv............spltltfvrfliagillliiallkegklaklslkd..wllllllgllgtvlafllffyalk 87 
                 g+++al++++++ +  ++ k+++++             + l l+ +++ +a+++++++ l++eg    l++ +  +++ ++   l+ ++ ++l f++l+
  EPX72262.1 166 GLFYALISTFIFVSQNIFGKKIFTEAkkhgnaskkshyNKLNLLLYSSGMAFLVMIPVWLHQEGFE-YLPVAGspVFFNVIHNGLSHFFQNILAFTLLS 263
                 8999******************9999999999999999999*****************99999999.555544336666777779************** PP

        EamA  88 ktsasnaslitslePvftlilsvlllgekltlkqllgivlillGvll 134
                  +s+   s+++++  +f+++ s+l+++++ +l+q +givl  +G++l
  EPX72262.1 264 IISPVAYSIASLIKRIFVIVVSILWFRQPTSLTQAMGIVLTAVGLYL 310
                 ********************************************997 PP

>> UAA  UAA transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8  18.6   1.5e-08   4.4e-05      17     300 ..      25     313 ..      11     315 .. 0.72

  Alignments for each domain:
  == domain 1  score: 22.8 bits;  conditional E-value: 1.5e-08
         UAA  17 vvllElivkeepkafg......nlltfvqflfvalegllesid.........ilkkrkiPlktYvilvalffitsvlnnealkydisvPvhiifrsskl 100
                  +l   + +++ k++        +ltf qf fva+++ ++ ++         i+k+ k  l t + l+++ ++ +v    a    i+v +   +++ + 
  EPX72262.1  25 WYLCSAVTNTSSKSIFndvrcpVTLTFLQFGFVAFFSAVCLLIrqffgngngIQKPSKLVLSTTLPLSVFQIGGHVFGSLATTR-IPVSTVHTVKALSP 122
                 333344444444332235555599*************9988877765555444****************************999.***999999***** PP

         UAA 101 ipvmilGililgkrYsllqylsvllltlGviiftllsakdkkedskeslnkfllGiallvlallldavlglvqeklykkygkhskealfyshllslplf 199
                 + + ++  ++ + +Ys   y s++ ltlGv ++  ++            +  l+G++  ++++++    +++  k++++ +kh + a   sh   l l+
  EPX72262.1 123 LFTVLAYRFLFQHSYSSTAYFSLVPLTLGVTLACSFEL-----------SADLCGLFYALISTFIFVSQNIFGKKIFTEAKKHGN-ASKKSHYNKLNLL 209
                 ******************************99877443...........445677666666666666667777777776666654.2234555555555 PP

         UAA 200 lllqgells.avkflsesedvallslpsk....lfylllnvltqyvcikgVlilisefgaltvtlvltlRKfvslllSillFknpltlqhlvgtllVfl 293
                 l  +g  +   + + +++e +++  lp+      f ++ n l  ++     ++l s ++  + ++   + ++  +++Sil+F++p +l++ +g +l  +
  EPX72262.1 210 LYSSGMAFLvMIPVWLHQEGFEY--LPVAgspvFFNVIHNGLSHFFQNILAFTLLSIISPVAYSIASLIKRIFVIVVSILWFRQPTSLTQAMGIVLTAV 306
                 54444333303333333333443..3333001146667777777777777788889999999999999******************************* PP

         UAA 294 glllysy 300
                 gl+ly  
  EPX72262.1 307 GLYLYDR 313
                 ***9965 PP

>> Wzy_C  O-Antigen ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.5     0.098   2.9e+02       8      75 ..     131     196 ..     123     229 .. 0.55
   2 !   13.8   0.0   1.1e-05     0.033       2     109 ..     258     383 ..     257     422 .. 0.80

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.098
       Wzy_C   8 lalflstsRsgiigllvalivlliifykrripfllllgilvgvilliilfvlstnletlknitkafgk 75 
                 +++  s+s +++ +l+ + + + ++   ++   + l g++ ++i  +i+++ +   +++  + k +g+
  EPX72262.1 131 FLFQHSYSSTAYFSLVPLTLGVTLACSFELS--ADLCGLFYALISTFIFVSQNIFGKKIFTEAKKHGN 196
                 5666778888888773333333344444444..34444333344444444433333333344344443 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 1.1e-05
       Wzy_C   2 alllsllalflstsRsgiigllvalivlliifykrripfllllgilvgvilliilfvlstnletlknitkafgkldkk..................... 79 
                 a+ l++++  +++s +++i  ++ ++v +++f ++    l  ++++v++++++ l   s++l  l  +    ++ + k                     
  EPX72262.1 258 AFTLLSIISPVAYSIASLIKRIFVIVVSILWFRQPTS--LTQAMGIVLTAVGLYLYDRSKKLSPLDTK--KVKVFEEKaldlesqpssrvssevfsgts 352
                 56677788889999999********************..99999888899999999989888888753..3444444467788**************99 PP

       Wzy_C  80 .kgkdksgssRlyiwkralplikdspilGtG 109
                     +k+ s R+   ++++pli +sp++ t 
  EPX72262.1 353 sPLSEKNLSHRFPRLDSVVPLISNSPLTPTS 383
                 9999**********************98777 PP

>> Multi_Drug_Res  Small Multidrug Resistance protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.2      0.51   1.5e+03      46      90 ..     102     145 ..      82     148 .. 0.74
   2 ?   -3.3   0.0       5.2   1.5e+04      58      80 ..     168     190 ..     164     193 .. 0.64
   3 ?   -1.3   0.0       1.2   3.6e+03      64      84 ..     212     232 ..     209     241 .. 0.82
   4 ?   16.4   1.5   3.7e-06     0.011      45      92 ..     256     303 ..     238     304 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.51
                     HHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHH CS
  Multi_Drug_Res  46 LskalkslpvsvAYavwsGiGtvlivlvgillfgeslslkkligl 90 
                      s+a+  +pvs++ +v +++  +++vl+   lf+ s s    ++l
      EPX72262.1 102 GSLATTRIPVSTVHTV-KALSPLFTVLAYRFLFQHSYSSTAYFSL 145
                     4788999999999887.5677777788888888888777766665 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 5.2
                     HHHHHHHHHHHHHHHHHHHHH-- CS
  Multi_Drug_Res  58 AYavwsGiGtvlivlvgillfge 80 
                      Ya+ s + +v   ++g  +f e
      EPX72262.1 168 FYALISTFIFVSQNIFGKKIFTE 190
                     56666666666666666666665 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 1.2
                     HHHHHHHHHHHHHHH------ CS
  Multi_Drug_Res  64 GiGtvlivlvgillfgeslsl 84 
                      +G++++v++ + l++e ++ 
      EPX72262.1 212 SSGMAFLVMIPVWLHQEGFEY 232
                     689999999999999998876 PP

  == domain 4  score: 16.4 bits;  conditional E-value: 3.7e-06
                     HHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH CS
  Multi_Drug_Res  45 lLskalkslpvsvAYavwsGiGtvlivlvgillfgeslslkkliglal 92 
                     +L+++l s+   vAY + s i  +++++v+il+f ++ sl + +g++l
      EPX72262.1 256 ILAFTLLSIISPVAYSIASLIKRIFVIVVSILWFRQPTSLTQAMGIVL 303
                     699999***************************************998 PP

>> TMEM234  Putative transmembrane family 234
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.6    0.0046        14      49     115 ..      89     155 ..      80     156 .. 0.81
   2 ?    8.1   1.4   0.00089       2.7      58     114 ..     250     310 ..     239     311 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0046
     TMEM234  49 iplllNqsgSvlf.flllgkadlslavpiaNslafvfTvltelllgekvlkkktvlgmllvvvgialc 115
                 +pl + q g  +f  l+ +++++s+ v  + +l+ +fTvl  ++l ++  +++++  ++  ++g++l 
  EPX72262.1  89 LPLSVFQIGGHVFgSLATTRIPVST-VHTVKALSPLFTVLAYRFLFQHSYSSTAYFSLVPLTLGVTLA 155
                 7888888887777245566777776.55678************************9999999999985 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.00089
     TMEM234  58 SvlfflllgkadlslavpiaNslaf....vfTvltelllgekvlkkktvlgmllvvvgial 114
                 S +f   l+ + ls+++p+a s+a+    +f ++++ l  ++ ++ ++ +g++l+ vg++l
  EPX72262.1 250 SHFFQNILAFTLLSIISPVAYSIASlikrIFVIVVSILWFRQPTSLTQAMGIVLTAVGLYL 310
                 667888899999********999872222567778888889999999***********998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (453 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       616  (0.0343577); expected 358.6 (0.02)
Passed bias filter:                      287  (0.0160076); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3439.50
//
Query:       EPX72263.1  [L=188]
Description: hypothetical protein SOCG_00029 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.9e-24   85.5   0.1    4.1e-24   85.0   0.1    1.2  1  DUF2012          Protein of unknown function (DUF2012)
    0.00082   19.3   0.1     0.0015   18.5   0.1    1.4  1  CarbopepD_reg_2  CarboxypepD_reg-like domain
  ------ inclusion threshold ------
      0.011   16.0   0.0       0.02   15.1   0.0    1.5  1  CarboxypepD_reg  Carboxypeptidase regulatory-like domain
      0.043   13.8   0.0      0.075   13.0   0.0    1.4  1  GrlR             T3SS negative regulator,GrlR
       0.11   12.7   0.0       0.17   12.1   0.0    1.3  1  SdrD_B           SdrD B-like domain


Domain annotation for each model (and alignments):
>> DUF2012  Protein of unknown function (DUF2012)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.0   0.1   1.2e-27   4.1e-24       3     123 .]      36     151 ..      34     151 .. 0.91

  Alignments for each domain:
  == domain 1  score: 85.0 bits;  conditional E-value: 1.2e-27
     DUF2012   3 plnllantrvlLdsgqqrkfkalvrrDGsFifrdlpegsYlLevespeyvFepyrVdvkdkgkakasklrivetaevnvvdesgneesyplkikavarr 101
                 +++l+++tr+ L+s++      +v+r+G F+f ++++g Y+L+ es+ey+F+++++ v+      +  +++ + +e  ++      +s+p++++av+++
  EPX72263.1  36 LKDLPYDTRAKLSSKTL-IKDCPVQRNGRFSFANVENGVYHLHFESIEYEFAQFHIIVN----ESQVDAYYTTVGEERSSTTALRSASHPITARAVQKH 129
                 578999******87777.8899*************************************....66667777777777777778889************* PP

     DUF2012 102 eyyeerekfsilsLlknPmvLl 123
                 ey++e +kfs+l+Llk+Pm+Ll
  EPX72263.1 130 EYLQEPRKFSLLRLLKSPMMLL 151
                 *********************7 PP

>> CarbopepD_reg_2  CarboxypepD_reg-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.1   4.2e-07    0.0015      32      69 ..      60      97 ..      44     112 .. 0.85

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 4.2e-07
  CarbopepD_reg_2 32 enGnFelknlpagkytLvvsyvGyktqekkvtvskekt 69
                      nG+F++ n+++g y+L+++++ y+ ++ ++ v++ + 
       EPX72263.1 60 RNGRFSFANVENGVYHLHFESIEYEFAQFHIIVNESQV 97
                     69*****************************9977654 PP

>> CarboxypepD_reg  Carboxypeptidase regulatory-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   0.0   5.6e-06      0.02      31      73 ..      55      96 ..      44     105 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 5.6e-06
  CarboxypepD_reg 31 stttdadGafrlrglppgtysvtvsapGyatatreevtltagq 73
                          ++G+f++++++ g y +++++  y+ a + ++ +++ q
       EPX72263.1 55 DCPVQRNGRFSFANVENGVYHLHFESIEYEFAQF-HIIVNESQ 96
                     556789***********************98887.46666555 PP

>> GrlR  T3SS negative regulator,GrlR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   2.1e-05     0.075       2      30 ..      70      98 ..      69     111 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2.1e-05
        GrlR  2 kdGlYfvkFksndrdlgeGvivlregkvn 30
                ++G+Y+++F+s+++++ +  i+++e +v+
  EPX72263.1 70 ENGVYHLHFESIEYEFAQFHIIVNESQVD 98
                69****************99999999986 PP

>> SdrD_B  SdrD B-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   4.7e-05      0.17      40      78 ..      54      91 ..      39     125 .. 0.65

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 4.7e-05
      SdrD_B 40 atttTdasGkYkFtnltpGeYkVeftapagytvtakkaG 78
                +    + +G+++F n+++G Y+++f++  +y++ + +  
  EPX72263.1 54 KDCPVQRNGRFSFANVENGVYHLHFES-IEYEFAQFHII 91
                45555699*****************65.44555444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (188 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       534  (0.0297841); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 1352.44
//
Query:       EPX72264.1  [L=392]
Description: GYF domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.6e-07   29.7   1.8    1.1e-06   28.2   1.8    1.8  1  GYF       GYF domain


Domain annotation for each model (and alignments):
>> GYF  GYF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.2   1.8     6e-11   1.1e-06       3      30 ..     335     363 ..     333     368 .. 0.83

  Alignments for each domain:
  == domain 1  score: 28.2 bits;  conditional E-value: 6e-11
         GYF   3 Yk.dpqgevqGPFsseeMqkWykagYFkd 30 
                 +k + ++ ++GP+s+++Mq+W ++gYF++
  EPX72264.1 335 FKwEGDEGIYGPYSAAQMQAWDNQGYFTN 363
                 55434455*******************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (392 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1156  (0.0644765); expected 358.6 (0.02)
Passed bias filter:                      469  (0.0261587); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.21s 00:00:00.70 Elapsed: 00:00:00.38
# Mc/sec: 3126.25
//
Query:       EPX72265.1  [L=461]
Description: AAA family ATPase Rvb2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   7.7e-157  522.0   2.3   9.5e-157  521.7   2.3    1.1  1  TIP49            TIP49 P-loop domain
    2.8e-23   81.8   0.4      1e-22   80.0   0.4    2.0  2  TIP49_C          TIP49 AAA-lid domain
    1.5e-08   35.2   0.1    1.4e-05   25.6   0.1    2.5  2  AAA              ATPase family associated with various cellul
    6.1e-07   29.3   0.4     0.0021   17.8   0.0    2.4  2  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    2.9e-05   23.6   1.1    0.00037   20.0   0.4    2.2  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
    4.3e-05   23.0   1.8    8.8e-05   22.0   0.6    1.9  2  DnaB_C           DnaB-like helicase C terminal domain
     0.0004   20.8   0.1     0.0023   18.3   0.1    2.0  1  AAA_16           AAA ATPase domain
     0.0043   16.8   0.0          1    9.0   0.0    2.6  2  Sigma54_activat  Sigma-54 interaction domain
     0.0056   16.9   0.0      0.017   15.4   0.0    1.8  2  AAA_28           AAA domain
     0.0076   16.3   0.1       0.86    9.6   0.0    2.6  2  AAA_5            AAA domain (dynein-related subfamily)
     0.0096   16.3   1.1       0.15   12.4   1.1    2.4  1  AAA_19           AAA domain
  ------ inclusion threshold ------
      0.013   15.4   0.4      0.081   12.8   0.4    2.2  1  CPT              Chloramphenicol phosphotransferase-like prot
      0.033   13.2   0.6        0.5    9.4   0.1    2.3  2  T2SSE            Type II/IV secretion system protein
      0.061   12.4   0.2       0.17   10.9   0.1    1.7  2  Parvo_NS1        Parvovirus non-structural protein NS1
      0.095   12.2   0.1        0.4   10.2   0.0    2.0  2  AAA_7            P-loop containing dynein motor region
       0.11   12.0   0.0       0.24   11.0   0.0    1.5  1  AAA_25           AAA domain


Domain annotation for each model (and alignments):
>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  521.7   2.3  8.5e-160  9.5e-157       1     351 []      16     359 ..      16     359 .. 0.98

  Alignments for each domain:
  == domain 1  score: 521.7 bits;  conditional E-value: 8.5e-160
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49   1 rislhshikgLGldedgeaekeeeglvGqkkareaagvivelikekklaGravLlaGpsgtGktalaiaiskelgedvpfvalsgsevyslevkktevl 99 
                 r+++hshikg+Gl++++e++++++g+vGq+kar+aagvi+++i+++k+aGr++L+aGp++tGkta+a+a+s+ lg+d+pfv+ls+sevysle++kte+l
  EPX72265.1  16 RLGAHSHIKGIGLNDNLEPKESSDGMVGQVKARRAAGVILRMIQAGKIAGRSILMAGPPSTGKTAIAMAMSQTLGSDTPFVSLSASEVYSLEMSKTEAL 114
                 5789*********************************************************************************************** PP

                 XXXXXXXXXXXXXX-S-EEEEEEEEEEE...-SSS-..TTS--EEEEEE-SS-EEEEEE-HHHHHHHHHHT--TT-EEEEETTT--EEE-SSS-SS--- CS
       TIP49 100 tqalrksigvrikeekevleGevveleveeaenplskekkikevkitlktakeekklklgskiaeellkekvkegDviviekesGkvkklGrsearake 198
                 +qalrksigvrikee+e++eGevve+++   +++++     k+ k+t++t+++e+ ++lg+k++++l+kekv +gDv++i+k+ Gkv+klGrs++ra++
  EPX72265.1 115 LQALRKSIGVRIKEETEIIEGEVVEIQI---DRSIT--GGNKQGKLTIRTTDMETVYDLGTKMIDALTKEKVLAGDVVTIDKSMGKVTKLGRSFTRARD 208
                 **************************99...67777..678899******************************************************* PP

                 ---..S--------S---S----XXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49 199 fDi..ekdefvelPkGevekkkevvqevtLhdlDvanarpqdllslllqllkskkteiteklreeinkkvakyveegkaeivpGvlfiDevhmlDiecf 295
                 +D+   +++fv++P+Ge++k+ke+v++v+Lhd+Dv+n+r+q++l+l+     ++++ei+ ++re+in+kv++++eegkaei pGvlf+DevhmlDiecf
  EPX72265.1 209 YDAmgADTRFVQCPQGEIQKRKEIVHTVSLHDIDVINSRTQGFLALF----AGDTGEIKPEVREQINTKVSEWREEGKAEISPGVLFVDEVHMLDIECF 303
                 ***99999***************************************....9*********************************************** PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49 296 sylnraleselaPivilatnrgiakirGtdiisphGipvDlldrlliiktekytke 351
                 s++nrale+elaPivi+a+nrgi++irGt++ sphGipvD+ldr+lii+t++y++e
  EPX72265.1 304 SFFNRALEDELAPIVIMASNRGITRIRGTNYRSPHGIPVDYLDRMLIISTQTYSHE 359
                 *****************************************************875 PP

>> TIP49_C  TIP49 AAA-lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       5.6   6.3e+03      46      63 ..     151     168 ..     149     168 .. 0.85
   2 !   80.0   0.4   9.2e-26     1e-22       1      66 []     364     429 ..     364     429 .. 0.99

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 5.6
     TIP49_C  46 krkkkevevedveeveeL 63 
                 k++k ++ + d e v++L
  EPX72265.1 151 KQGKLTIRTTDMETVYDL 168
                 6788899999***99987 PP

  == domain 2  score: 80.0 bits;  conditional E-value: 9.2e-26
     TIP49_C   1 IlkiRakeEgvkldeeAldlLakigtetSLRYaiqLltpasilakkrkkkevevedveeveeLFlD 66 
                 Il+iR++eE+v++  +Ald+La+ig etSLRYa+ L++ ++++a krk+ ++e  d+++v++LFlD
  EPX72265.1 364 ILHIRCQEEDVDMAPSALDYLASIGRETSLRYALLLISSSNQVALKRKSATIEDSDIKRVYDLFLD 429
                 9****************************************************************9 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.1   1.2e-08   1.4e-05       1      52 [.      68     121 ..      68     138 .. 0.83
   2 !    7.1   0.0    0.0062         7      44     111 ..     268     324 ..     235     343 .. 0.71

  Alignments for each domain:
  == domain 1  score: 25.6 bits;  conditional E-value: 1.2e-08
                 EEEESSTTSSHHHHHHHHHHHHT..HEEEEEETTTCSSSSTTHHHHHHHHHHHH CS
         AAA   1 vllyGppGtGKTllakavakelg..vefleisgsellskyvgesekkirelfke 52 
                 +l+ Gpp tGKT++a a+ ++lg  ++f+++s+se+ s  ++++e+ +++l k+
  EPX72265.1  68 ILMAGPPSTGKTAIAMAMSQTLGsdTPFVSLSASEVYSLEMSKTEALLQALRKS 121
                 699******************976699**********77777777777766554 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0062
                 HHHHHHHHHHHHTS....TSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTSSSTEEEEEEESS CS
         AAA  44 kkirelfkeakeka....kpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkkeskvivigatnr 111
                 ++i+  ++e +e+     +p +lf+DE++ l  +             + + ++l+++       ivi+a+nr
  EPX72265.1 268 EQINTKVSEWREEGkaeiSPGVLFVDEVHMLDIE-----------CFSFFNRALEDELA----PIVIMASNR 324
                 44555555544444566789*********98333...........36666666666655....266666666 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   1.9e-06    0.0021       7      63 ..      39      95 ..      32     128 .. 0.85
   2 !    9.3   0.1   0.00076      0.86      86     118 ..     288     320 ..     283     329 .. 0.88

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 1.9e-06
      RuvB_N  7 eeyigqekvkeklkifieaakkreealdhvllyGpPGlGkttlakiiakelgvklki 63
                +  +gq k +    ++++  ++ + a   +l++GpP  Gkt++a+ +++ lg++   
  EPX72265.1 39 DGMVGQVKARRAAGVILRMIQAGKIAGRSILMAGPPSTGKTAIAMAMSQTLGSDTPF 95
                5589*****************9999*************************9987655 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00076
      RuvB_N  86 dvlfideihrlsraveevlysamedfrldivig 118
                  vlf+de+h l+ +   ++  a+ed    ivi 
  EPX72265.1 288 GVLFVDEVHMLDIECFSFFNRALEDELAPIVIM 320
                 59***********************99998885 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.4   3.3e-07   0.00037       7      69 ..      43     112 ..      39     121 .. 0.75
   2 ?    1.8   0.0      0.12   1.4e+02     107     134 ..     287     314 ..     280     327 .. 0.81

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 3.3e-07
  Mg_chelatase   7 Gqeeakra....leiaaaG...gHnlllvGppGsGKtmlakrlpsllpplseeealevakiasvagkkee 69 
                   Gq +a+ra    l++  aG   g ++l++Gpp +GKt +a ++++ l + +   +l +++++s+  +k+e
    EPX72265.1  43 GQVKARRAagviLRMIQAGkiaGRSILMAGPPSTGKTAIAMAMSQTLGSDTPFVSLSASEVYSLEMSKTE 112
                   5555555522224445566222579**************************************9985544 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.12
  Mg_chelatase 107 nGvLfLDElpefkrkvlevLRePledge 134
                    GvLf+DE+  ++ + +  + + led+ 
    EPX72265.1 287 PGVLFVDEVHMLDIECFSFFNRALEDEL 314
                   59********999999999988888864 PP

>> DnaB_C  DnaB-like helicase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.6   7.9e-08   8.8e-05      18     122 ..      64     173 ..      55     197 .. 0.70
   2 ?   -1.2   0.0      0.91     1e+03     132     157 ..     339     364 ..     313     368 .. 0.72

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 7.9e-08
                 TTXEEEEEEXTTSSHHHHHHHHHHHHHHCSTSE....EEEEESSSXHHHHHHHHHHHHHTXX...HHHHHHTTSXHHHHHHHHHHHHHHHHSEEEEEEX CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      DnaB_C  18 kgdliiiAarpsmGktalalniaenaavkeklp....vavfslemsaeqlvqRllsseaeid...skklrtgklkeedweklteaieelseaklfiddt 109
                  g  i++A+ ps+Gkta+a+ + ++   ++         v+slems+++ + + l +  +++   ++++ +g++ e ++++  +  +  ++ kl+i  t
  EPX72265.1  64 AGRSILMAGPPSTGKTAIAMAMSQTLGSDTPFVslsaSEVYSLEMSKTEALLQALRKSIGVRikeETEIIEGEVVEIQIDRSITGGN--KQGKLTIRTT 160
                 677899*****************99887444212334889*********99999999888872234456667777766665555433..5666777777 PP

                 SSXCHHHHHHHHH CS
                 xxxxxxxxxxxxx RF
      DnaB_C 110 paltvseirskar 122
                    tv ++ +k+ 
  EPX72265.1 161 DMETVYDLGTKMI 173
                 7777777766654 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.91
                 EEEEEEGGGTBTSCSSSCCCHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx RF
      DnaB_C 132 liviDyLqlmegseekenreqevsei 157
                  i +DyL+ m   ++++  ++ev ei
  EPX72265.1 339 GIPVDYLDRMLIISTQTYSHEEVKEI 364
                 5779****999664455556666665 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.1     2e-06    0.0023      17     145 ..      56     296 ..      48     320 .. 0.65

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 2e-06
      AAA_16  17 ervrsgrp..elvllsGesGvGKsslvrellralekdggif.lrgkcdqlesaipy...salaqalareellrqlldeaesaeleawrekleeala... 106
                 +++ +g    +++l  G++ +GK++++ +  + l  d  ++ l++  + +   +++    al+qal r+++   +++e+e  e e    +++++++   
  EPX72265.1  56 RMIQAGKIagRSILMAGPPSTGKTAIAMAMSQTLGSDTPFVsLSASEVYS---LEMsktEALLQAL-RKSIGVRIKEETEIIEGEVVEIQIDRSITggn 150
                 55555555669************************997666455555555...3334435699999.77999999999999999999999999988777 PP

      AAA_16 107 ................................................................................................... 106
                                                                                                                    
  EPX72265.1 151 kqgkltirttdmetvydlgtkmidaltkekvlagdvvtidksmgkvtklgrsftrardydamgadtrfvqcpqgeiqkrkeivhtvslhdidvinsrtq 249
                 666666666666666666666666666666666666666666666666666666666666666666666555555555555555555555555555555 PP

      AAA_16 107 ........avpelagaeasrllellkrllallsrderplvlvlDdlq 145
                         +++e++++ +++++ ++++  +  + + +p vl++D+++
  EPX72265.1 250 gflalfagDTGEIKPEVREQINTKVSEWREEGKAEISPGVLFVDEVH 296
                 55555555445555554455555555555444444445555655555 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.0   0.00091         1      16      60 ..      59     102 ..      45     125 .. 0.80
   2 ?    5.0   0.0     0.016        18      92     119 ..     285     312 ..     274     318 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00091
                      HHHCTSSS-EEEECSTTSSHHHHHHHHHHHSTTTTS-EEEEETTT CS
  Sigma54_activat  16 kkvaktdlsvlitGesGtGKellaraiheaskrkekpfvavncaa 60 
                      ++      s+l+ G   tGK+ +a a+ ++   +++pfv++  ++
       EPX72265.1  59 QAGKIAGRSILMAGPPSTGKTAIAMAMSQTLG-SDTPFVSLSASE 102
                      444445579******************98766.789999988765 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.016
                      TTTSEEEEETGGGS-HHHHHHHHHHHHH CS
  Sigma54_activat  92 adgGtlfLDeigelplelQekLlrvlqe 119
                       + G+lf+De++ l++e+ + + r+l++
       EPX72265.1 285 ISPGVLFVDEVHMLDIECFSFFNRALED 312
                      4579***********9987777777765 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   1.5e-05     0.017       2      59 ..      68     128 ..      67     143 .. 0.83
   2 ?   -3.3   0.0       8.5   9.5e+03      52      79 ..     267     293 ..     256     297 .. 0.67

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.5e-05
      AAA_28   2 ivitGgestGKTtlleaLaar...gypvvpEaareileeklakgedalpwvedllafaerv 59 
                 i + G++stGKT ++ a++++   ++p v  +a e+++ ++ k+e  l++ ++ + ++++ 
  EPX72265.1  68 ILMAGPPSTGKTAIAMAMSQTlgsDTPFVSLSASEVYSLEMSKTEALLQALRKSIGVRIKE 128
                 7789****************99889****************99998777766666666554 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 8.5
      AAA_28  52 llafaervleeqleeeaaaaankvlfcD 79 
                 + +++ +v e++ e  a+  +++vlf+D
  EPX72265.1 267 REQINTKVSEWREEGKAEI-SPGVLFVD 293
                 5567777777776666664.88888888 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.6   0.0   0.00077      0.86       2      32 ..      68      98 ..      67     139 .. 0.87
   2 ?    3.9   0.0     0.043        48      64      92 ..     282     313 ..     257     330 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00077
                EEEE--SSSSHHHHHHHGGGGBS--EEEEE- CS
       AAA_5  2 vlLvGppGtgKselaerlaaalnreveyvql 32
                +l+ Gpp tgK+ +a+ +++ l++ +  v l
  EPX72265.1 68 ILMAGPPSTGKTAIAMAMSQTLGSDTPFVSL 98
                799******************9766655555 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.043
                 -...G-SEEEEESGGG--HHHHHHHHHHHHSS CS
       AAA_5  64 r...egeilvlDEveraesevlnsLlslleer 92 
                 +   ++ +l++DEv++++ e ++ +++ le++
  EPX72265.1 282 KaeiSPGVLFVDEVHMLDIECFSFFNRALEDE 313
                 2445899*******************999986 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   1.1   0.00013      0.15       7     129 ..      62     313 ..      56     320 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00013
      AAA_19   7 alkekvllvtaGpGtGKTrvlkhivallvelggvkp.............eeillvaftgrAakelrerlaalgae........................ 68 
                 +++ + +l+ ++p tGKT + +++ + l + +                  e ll a+ +    +++e+++ +++e                        
  EPX72265.1  62 KIAGRSILMAGPPSTGKTAIAMAMSQTLGSDTPFVSlsasevyslemskTEALLQALRKSIGVRIKEETEIIEGEvveiqidrsitggnkqgkltirtt 160
                 667788899999999999999988888876653322577776666666555555555555556666666666666999999999999999998887777 PP

      AAA_19  69 .atTiHrlal......................................................................................... 77 
                   +T+  l++                                                                                         
  EPX72265.1 161 dMETVYDLGTkmidaltkekvlagdvvtidksmgkvtklgrsftrardydamgadtrfvqcpqgeiqkrkeivhtvslhdidvinsrtqgflalfagdt 259
                 756666665588888888888899999999999999999999999999999999999999999999999999999999888888888888877777666 PP

      AAA_19  78 .....ldfddlltealelle...........eaeeekklqeeellivDEfqdvdelqyrLlkallgek 129
                                                ++e + ++ +  +l+vDE+ ++d   ++++++ l+++
  EPX72265.1 260 geikpE-------------VreqintkvsewREEGKAEI-SPGVLFVDEVHMLDIECFSFFNRALEDE 313
                 555531.............02233344444445667777.778***********99999888877554 PP

>> CPT  Chloramphenicol phosphotransferase-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.4   7.2e-05     0.081       2      88 ..      66     158 ..      65     250 .. 0.56

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 7.2e-05
                 -EEEEEE-TTSSHHHHHHHHHHHS..SS-EEEEEHHHHHHH.S-GGGGT.....STTSEEEETTSEEE-HHHHHHHHHHHHHHHHHHHTT-EEEE CS
         CPT   2 riilLnGgsssGKsslaralqevl..depwlhlgvDafvea.lppkrqd.....eadglefeteleeigpeldlllaalyeavaamaraGnnviv 88 
                 r il+ G +s+GK+++a a+ ++l  d+p++ l   +     + +         + +g++ + e+e i  e + ++  + +++ +  ++G+  i 
  EPX72265.1  66 RSILMAGPPSTGKTAIAMAMSQTLgsDTPFVSLSASEVYSLeMSKTEALlqalrKSIGVRIKEETEII--EGEVVEIQIDRSITGGNKQGKLTIR 158
                 679*****************99854489****987665553144333325566666777777666544..3334444556666666666665554 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.1   0.00045       0.5     118     156 ..      54      92 ..       9      98 .. 0.84
   2 ?    1.8   0.0     0.091     1e+02      36     101 ..     100     163 ..      95     188 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00045
       T2SSE 118 iaevlrkavrerglilvsGgTgsGKttllyallkeinks 156
                 i +++++   +  +il++G+ ++GKt ++ a+ +++ ++
  EPX72265.1  54 ILRMIQAGKIAGRSILMAGPPSTGKTAIAMAMSQTLGSD 92 
                 56666666667789*****************99998766 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.091
       T2SSE  36 lreveelekaalerlisriaalakldiseerplqdarlpekgvrlrvvllPvvagealviRkksak 101
                  +ev +le +++e+l++ +  + + +i+ee  ++++++   ++++  ++    ++ +l+iR  + +
  EPX72265.1 100 ASEVYSLEMSKTEALLQALRKSIGVRIKEETEIIEGEVV--EIQIDRSITGGNKQGKLTIRTTDME 163
                 578889999999*************************99..8888888888888888888844433 PP

>> Parvo_NS1  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   0.00015      0.17      99     138 ..      50      89 ..      44      92 .. 0.80
   2 ?   -2.3   0.0       1.6   1.8e+03     203     235 ..     318     351 ..     312     366 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00015
   Parvo_NS1  99 vgqvllawlskqlgkrntvwfyGpantGktnlaeaIakav 138
                 ++ v+l++++  +     +++ Gp++tGkt +a+a+ +++
  EPX72265.1  50 AAGVILRMIQAGKIAGRSILMAGPPSTGKTAIAMAMSQTL 89 
                 555666666666666778999**************99876 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 1.6
   Parvo_NS1 203 viitsnvditlvvsgntssvahana..lkdrmlkl 235
                 vi+ sn+ it+++  n     h  +  + drml++
  EPX72265.1 318 VIMASNRGITRIRGTN-YRSPHGIPvdYLDRMLII 351
                 8999999999999887.455566666666777665 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   0.00036       0.4      32      62 ..      64      93 ..      38     122 .. 0.78
   2 ?   -1.5   0.0       1.3   1.5e+03     103     116 ..     289     302 ..     281     305 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00036
       AAA_7 32 nkkpvllvGptGtGKtviikdllkkldkeky 62
                +++++l+ Gp  tGKt+i++ + ++l ++ +
  EPX72265.1 64 AGRSILMAGPPSTGKTAIAMAMSQTLGSD-T 93
                46899****************99999843.3 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 1.3
       AAA_7 103 vvFvDDlnmpakek 116
                 v+FvD+++m   e 
  EPX72265.1 289 VLFVDEVHMLDIEC 302
                 89*******98876 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00021      0.24      32      63 ..      64      95 ..      53     122 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00021
      AAA_25 32 agelallaGapgtGKttlaldlalavatGkpw 63
                ag  +l aG+p tGKt++a+ ++ ++ ++ p+
  EPX72265.1 64 AGRSILMAGPPSTGKTAIAMAMSQTLGSDTPF 95
                7999****************999877777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (461 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       577  (0.0321825); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        68  (0.00379274); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.60u 0.26s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 3258.51
//
Query:       EPX72266.1  [L=732]
Description: Lid2 complex subunit Jmj3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-28   99.4   0.0    5.4e-28   97.7   0.0    2.0  2  JmjC      JmjC domain, hydroxylase
    1.2e-09   37.9   0.1    2.8e-09   36.8   0.1    1.6  1  JmjN      jmjN domain


Domain annotation for each model (and alignments):
>> JmjC  JmjC domain, hydroxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.7   0.0     6e-32   5.4e-28       2     114 .]     192     307 ..     191     307 .. 0.95
   2 ?   -3.4   0.0       1.4   1.3e+04      24      44 ..     375     395 ..     370     420 .. 0.78

  Alignments for each domain:
  == domain 1  score: 97.7 bits;  conditional E-value: 6e-32
                 EEEE-TT-EEEEE--GGG-EEEEEEEEES-EEEEEE-GGGHHHHHHHHHHH...HHCCSTTGCCTTTCEE-HHHHHHTT---EEEEE-TT-EEEE-TT- CS
        JmjC   2 lylgmpksttpwhiedqglySinylhfgapkvWyiipeekkeklekvlskk...nskeqpdllrhkstlispkqlekegipvyrfvqkpgefVfvfpga 97 
                 +++g++k+t pw++e+++ly+++++ +gap +Wy+ip++++  ++k+++k    +++++ d+l h++ l++p++l ++gi + ++v +++e++++fpg+
  EPX72266.1 192 IFAGKWKTTLPWRLESNKLYAVHVHLGGAPLQWYLIPSSQALAFQKLAEKLapnEHWRCADFLLHQNILFPPSTLAQSGINISSTVLRANEMLITFPGS 290
                 679******************************************88888788899******************************************* PP

                 EEEEEESSSEEEEEEEE CS
        JmjC  98 yHsvfnlgfniaeavnf 114
                 yHs+f+lg++   ++ f
  EPX72266.1 291 YHSAFCLGDTTLRRFAF 307
                 *********98777665 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 1.4
                 EEEEEES-EEEEEE-GGGHHH CS
        JmjC  24 nylhfgapkvWyiipeekkek 44 
                 n++h +++ +W ++p+++ +k
  EPX72266.1 375 NSSHSDQSIRWNGVPKSQNNK 395
                 667888888899999887765 PP

>> JmjN  jmjN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.8   0.1   3.1e-13   2.8e-09       1      33 [.      35      67 ..      35      67 .. 0.99

  Alignments for each domain:
  == domain 1  score: 36.8 bits;  conditional E-value: 3.1e-13
                -EE---HHHHC-HHHHHHHHHHHHCCCSEEEE- CS
        JmjN  1 PvFyPTeeEFkdplkYiekieplgekyGIcKIv 33
                Pv +PT eEF+d  ++ ++i++lge+yG +K+v
  EPX72266.1 35 PVVKPTAEEFSDMEAFFQEIRDLGERYGAIKVV 67
                9*******************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (732 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       449  (0.0250432); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.24s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 5038.15
//
Query:       EPX72267.1  [L=65]
Description: ribosomal protein subunit L36 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.8e-18   66.4   9.1    2.3e-18   66.1   9.1    1.1  1  Ribosomal_L36    Ribosomal protein L36
  ------ inclusion threshold ------
      0.068   13.0   0.6      0.086   12.7   0.6    1.2  1  Crust_neurohorm  Crustacean CHH/MIH/GIH neurohormone family


Domain annotation for each model (and alignments):
>> Ribosomal_L36  Ribosomal protein L36
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.1   9.1   2.5e-22   2.3e-18       1      38 []      28      65 .]      28      65 .] 0.98

  Alignments for each domain:
  == domain 1  score: 66.1 bits;  conditional E-value: 2.5e-22
  Ribosomal_L36  1 MKVrssvkkmcegCkvvrRkgrvyviCkknPrhKqRQG 38
                   +K+++svkk+c  C++vrRkgr+y+ Ckk+PrhK RQG
     EPX72267.1 28 FKTKASVKKRCSSCYMVRRKGRLYILCKKHPRHKSRQG 65
                   69***********************************9 PP

>> Crust_neurohorm  Crustacean CHH/MIH/GIH neurohormone family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.6   9.6e-06     0.086      17      39 ..      35      57 ..      27      61 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 9.6e-06
  Crust_neurohorm 17 driCedCyeLyrepqlhrlCkke 39
                      + C  Cy++ r+  l+ lCkk+
       EPX72267.1 35 KKRCSSCYMVRRKGRLYILCKKH 57
                     667******************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       437  (0.0243739); expected 358.6 (0.02)
Passed bias filter:                      237  (0.0132188); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.23s 00:00:00.57 Elapsed: 00:00:00.38
# Mc/sec: 516.35
//
Query:       EPX72268.1  [L=773]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   4.5e-134  447.5   0.0    1.8e-82  277.5   0.0    2.1  2  RNA12     RNA12 protein
    8.4e-08   31.9   0.0    9.6e-07   28.5   0.0    2.5  2  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
    5.3e-05   23.2   0.0    0.00012   22.1   0.0    1.7  1  ATPase_2  ATPase domain predominantly from Archaea
  ------ inclusion threshold ------
      0.021   15.2   0.0      0.071   13.5   0.0    1.9  1  AAA_16    AAA ATPase domain


Domain annotation for each model (and alignments):
>> RNA12  RNA12 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  277.5   0.0     4e-86   1.8e-82       1     237 [.     318     552 ..     318     555 .. 0.98
   2 !  170.2   0.0   1.4e-53   6.3e-50     269     443 ..     551     729 ..     548     730 .. 0.94

  Alignments for each domain:
  == domain 1  score: 277.5 bits;  conditional E-value: 4e-86
       RNA12   1 RkekiedlkewleEnvntFivvkGPrGSGkkeLvldrvlkdrkkvlvidCdelvkarndaelisaaAsqlGYfPvFswlnsissliDlavqgliGqkag 99 
                 R++++e+l+ewl+E+ ++Fivv+GPrGSGk++Lv dr++ drk+vl++dCd+l++ +++++++s +Asq+GYfP+Fs+lns+ss+iD+a+qgliGqk+g
  EPX72268.1 318 REKDCEKLEEWLNEALHSFIVVQGPRGSGKRDLV-DRAVGDRKHVLIFDCDRLFSGTSQEMFVSSLASQTGYFPLFSFLNSLSSMIDMAAQGLIGQKTG 415
                 8899******************************.**************************************************************** PP

       RNA12 100 lsetkeaqlknileiaaaalkdialeerkkedkaatlkeedyleahpeakPvvvidnflakaekngvvykklaeWaasLvqsniahVifltedvsaska 198
                 + +++e q+++il++++a+l+++al e++ ++++++l+e++yle h+++ P+vv+dnf+ ++ + + +++ +aeWa++Lv+++i hV++lt dv+ +k+
  EPX72268.1 416 IVSSSEGQVRQILSTTQAVLRKLALGEQRGTQNSNVLDESEYLEVHADKLPIVVLDNFQLRKLS-NPMQHMVAEWAGNLVKEGIVHVLMLTPDVGGTKT 513
                 **************************************************************99.78999***************************** PP

       RNA12 199 LskaLpnqvfktislgDaseesarkyVlsklkeeaekee 237
                 L++++  +   t+ lgDa++  ar+yVl+++ ee+++e+
  EPX72268.1 514 LEQYVGGWENCTLLLGDADPALARRYVLDSIPEEMQTEK 552
                 ********************************9999876 PP

  == domain 2  score: 170.2 bits;  conditional E-value: 1.4e-53
       RNA12 269 ekdlkeldealeklGGRltDLealvrrvks.getpkeAveeiieqsaeeilkmfll....dseeakkakwtkeqaWklikklskkgsieynellleelf 362
                 ek++kel+++l k+GGRl DL++++rr+++  +++++A+ +ii+q++++il++fl+    +   +kk  +t+eqaW li+ ls++++++y++l+l++lf
  EPX72268.1 551 EKLEKELKKQLPKIGGRLRDLDYVARRLRVnNSSVSDAIGGIISQNTSDILQTFLRtnslSFGYDKKPIYTSEQAWILISLLSQHEHVPYHKLMLDPLF 649
                 68899************************956789********************963322235778889***************************** PP

       RNA12 363 kgsaesalkaLekaelisvstedgrpskikagkPvyraafkrlvsdkvlkavlelevleklikleekkikklEeElrllkk 443
                 kg  e+a++aLe+ eli+++t ++rp+ki agkPvy +af++lv+d+vl+a+++ + ++++i+l +++i+k EeEl+llk 
  EPX72268.1 650 KG-CEDAVRALEEDELITITTVNARPDKIFAGKPVYVTAFQQLVNDSVLRASMSQARCNAIISLCNSAIRKDEEELQLLKG 729
                 **.9**************************************************************************985 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.5   0.0   2.1e-10   9.6e-07       8      68 ..     170     224 ..     166     226 .. 0.94
   2 ?   -0.1   0.0      0.18   8.1e+02      26      54 ..     284     311 ..     279     312 .. 0.84

  Alignments for each domain:
  == domain 1  score: 28.5 bits;  conditional E-value: 2.1e-10
                 TTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEE CS
       RRM_1   8 pdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggre 68 
                 p++++e+L+ +F+k+G+ +s+++v++        a+ +F s  +A++Al++++g  +++++
  EPX72268.1 170 PSLSQEKLYSIFRKYGKLRSVEVVSE------ERAILKFSSLKAATSALNCMHGIRIKDTK 224
                 7899*********************7......***********************999876 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.18
                 EEEEEEEETTTSEEEEEEEEESSHHHHHH CS
       RRM_1  26 ksiklvrdetgkskgfafVeFeskedAek 54 
                 ++i+l++   +k++ + f  F+++e++ek
  EPX72268.1 284 RNIRLFS-LIKKTRDIVFSSFHDQESMEK 311
                 5677777.58899999***********97 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0   2.7e-08   0.00012       4      62 ..     318     379 ..     315     507 .. 0.69

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 2.7e-08
    ATPase_2   4 RekelkeleeilerepneiyfiYGpegsGKtaLlkeiienledkdk...yviyyialreesi 62 
                 Rek  ++lee+l++   +++++ Gp+gsGK  L+ +++  +++      ++++    +e + 
  EPX72268.1 318 REKDCEKLEEWLNEALHSFIVVQGPRGSGKRDLVDRAVGDRKHVLIfdcDRLFSGTSQEMFV 379
                 9************************************9998664333335555555444444 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.6e-05     0.071       4     145 ..     317     474 ..     315     492 .. 0.51

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.6e-05
      AAA_16   4 GReeeleqLlsalervrsgrpelvllsGesGvGKsslvrellralekdggiflrgkcdql..esaipy..salaqalareellrqlldeaesaeleawr 98 
                  Re++ e+L++ l+ +     + +++ G++G+GK  lv+++     +d+ ++l  +cd+l  +++ ++  s la++     l+  l++ ++     a++
  EPX72268.1 317 TREKDCEKLEEWLNEALH---SFIVVQGPRGSGKRDLVDRAV----GDRKHVLIFDCDRLfsGTSQEMfvSSLASQTGYFPLFSFLNSLSSM-IDMAAQ 407
                 588888888888887765...589**************5444....4557899999999955222222332233333333444433333111.222222 PP

      AAA_16  99 ekleealaavpelagaea..srllellkrllallsrder..................plvlvlDdlq 145
                   + + +++v++ +g+ +   +  +++ r lal ++++                     ++vlD++q
  EPX72268.1 408 GLIGQKTGIVSSSEGQVRqiLSTTQAVLRKLALGEQRGTqnsnvldeseylevhadkLPIVVLDNFQ 474
                 2222222222222222222222222222222222222223333444444444433323677888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (773 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       565  (0.0315132); expected 358.6 (0.02)
Passed bias filter:                      497  (0.0277205); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.72u 0.30s 00:00:01.02 Elapsed: 00:00:00.49
# Mc/sec: 4749.58
//
Query:       EPX72269.1  [L=123]
Description: anaphase-promoting complex subunit Apc15 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-09   38.7   0.1    2.5e-09   38.0   0.1    1.3  1  Apc15p    Apc15p protein


Domain annotation for each model (and alignments):
>> Apc15p  Apc15p protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.0   0.1   1.4e-13   2.5e-09      66     121 ..      12      67 ..       4      71 .. 0.82

  Alignments for each domain:
  == domain 1  score: 38.0 bits;  conditional E-value: 1.4e-13
      Apc15p  66 eespyyprggkldelrmeeeqmerrlkaIrnlGsnwlkPiGvnKTleqireerrea 121
                  e  y p + ++ el  +e ++e++  +I+++G +w++PiG+nKT+++  e  +++
  EPX72269.1  12 HELWYSPFQMSMKELEKDELNLENQELSIKQHGFQWIRPIGINKTMQEQAELGERE 67 
                 566677788899**********************************9866654433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       750  (0.0418317); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 942.55
//
Query:       EPX72270.1  [L=94]
Description: 60S ribosomal protein L37a [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.3e-38  128.4   7.4    9.3e-38  128.2   7.4    1.0  1  Ribosomal_L37ae  Ribosomal L37ae protein family
  ------ inclusion threshold ------
       0.11   12.5   3.9       0.19   11.7   3.9    1.4  1  Zn_Tnp_IS1595    Transposase zinc-ribbon domain
       0.12   12.8   0.7       0.33   11.5   0.1    1.9  2  zf-H2C2_2        Zinc-finger double domain
          2    8.9   6.2        5.3    7.5   6.2    1.8  1  Lar_restr_allev  Restriction alleviation protein Lar


Domain annotation for each model (and alignments):
>> Ribosomal_L37ae  Ribosomal L37ae protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.2   7.4   2.1e-41   9.3e-38       1      85 []       4      90 ..       4      90 .. 0.98

  Alignments for each domain:
  == domain 1  score: 128.2 bits;  conditional E-value: 2.1e-41
                     XXXXXX-GGGGTTSS-HHHHHHHHHHHHHHHS-BEESSSSSSEEEEEETTEEEE..TTTTEEEE-BSSSSS-HHHHHHHH-XXXXXX CS
  Ribosomal_L37ae  1 rtkkvgiaGkygtrYGaslrkrvkkieisqhakytCpfcgktkvkRkavgiwkC..kkcgktvaGgAytpettsaktvksairrlke 85
                     rtkkvg++Gkyg+rYGaslr+ v+kie++qha+y+Cpfcg+++vkR+a+giw+C  k cgk +aGgA+t++t++a++++s+irrl+e
       EPX72270.1  4 RTKKVGVTGKYGVRYGASLRRDVRKIEVQQHARYQCPFCGRNTVKRSAAGIWNCrgKACGKAMAGGAWTVTTPAATSARSTIRRLRE 90
                     79****************************************************7779**************************986 PP

>> Zn_Tnp_IS1595  Transposase zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   3.9   4.3e-05      0.19      19      45 ..      37      64 ..      32      65 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 4.3e-05
  Zn_Tnp_IS1595 19 fvCPhCgsrkayriktrglfqCke..Crk 45
                     CP+Cg  ++ r ++ g + C+   C+k
     EPX72270.1 37 YQCPFCGRNTVKRSAA-GIWNCRGkaCGK 64
                   57*****778888777.*****9888986 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   7.3e-05      0.33      14      25 ..      36      47 ..      28      48 .. 0.83
   2 ?   -1.1   0.1      0.71   3.2e+03      16      23 ..      56      65 ..      53      65 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 7.3e-05
   zf-H2C2_2 14 pyeCplCdkaFk 25
                +y+Cp+C+  ++
  EPX72270.1 36 RYQCPFCGRNTV 47
                6******98875 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.71
   zf-H2C2_2 16 eCp..lCdka 23
                +C   +C+ka
  EPX72270.1 56 NCRgkACGKA 65
                5666589986 PP

>> Lar_restr_allev  Restriction alleviation protein Lar
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   6.2    0.0012       5.3       4      37 ..      37      68 ..      35      86 .. 0.64

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0012
  Lar_restr_allev  4 kpCPfCggravlersqrvvaeigqcvyC..adCga...s 37
                     + CPfCg   v+  + + ++       C  + Cg    +
       EPX72270.1 37 YQCPFCGRNTVKRSAAGIWN-------CrgKACGKamaG 68
                     78****99888877766664.......532447765543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       677  (0.0377601); expected 358.6 (0.02)
Passed bias filter:                      476  (0.0265492); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.37u 0.21s 00:00:00.57 Elapsed: 00:00:00.37
# Mc/sec: 764.49
//
Query:       EPX72271.1  [L=786]
Description: UBA/EH/EF hand domain-containing protein Ucp8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.9e-25   87.2   0.3    4.3e-09   36.3   0.2    3.5  3  EF-hand_4       Cytoskeletal-regulatory complex EF hand
    7.5e-08   32.7   0.7    0.00011   22.6   0.2    3.7  4  EF-hand_7       EF-hand domain pair
    1.6e-05   24.1   0.6       0.71    9.6   0.2    4.0  4  EF-hand_1       EF hand
    2.2e-05   24.0   1.2       0.34   10.9   0.2    3.9  3  EF-hand_6       EF-hand domain
    0.00032   20.5   0.0    0.00064   19.6   0.0    1.5  1  UBA             UBA/TS-N domain
  ------ inclusion threshold ------
      0.021   15.4   7.1      0.058   14.0   7.1    1.8  1  HIP1_clath_bdg  Clathrin-binding domain of Huntingtin-interac
       0.23   11.5   2.5       0.53   10.4   2.5    1.5  1  DivIVA          DivIVA protein
       0.36   10.9  13.8        1.9    8.6   0.1    3.3  3  ADIP            Afadin- and alpha -actinin-Binding
       0.47   10.5   8.2        1.2    9.1   8.2    1.6  1  TPR_MLP1_2      TPR/MLP1/MLP2-like protein
       0.47   10.7   6.5          1    9.6   6.5    1.5  1  TMF_TATA_bd     TATA element modulatory factor 1 TATA binding
       0.91   10.0   3.4        2.5    8.6   0.1    3.2  3  FlaC_arch       Flagella accessory protein C (FlaC)
        1.1    9.7   5.7        2.7    8.4   5.7    1.7  1  DUF4600         Domain of unknown function (DUF4600)
        4.4    7.4   8.0         21    5.2   1.0    2.4  2  DUF1664         Protein of unknown function (DUF1664)
        5.7    7.6   6.8         40    4.9   0.2    2.8  2  YabA            Initiation control protein YabA
          8    6.5  12.0         28    4.7   9.4    2.6  2  CENP-F_leu_zip  Leucine-rich repeats of kinetochore protein C


Domain annotation for each model (and alignments):
>> EF-hand_4  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   1.2e-05     0.015       3      72 ..       6      76 ..       2      86 .. 0.87
   2 !   31.4   0.0   1.2e-10   1.4e-07      22      98 ..     148     224 ..     128     229 .. 0.83
   3 !   36.3   0.2   3.6e-12   4.3e-09       8      72 ..     282     347 ..     276     366 .. 0.88

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 1.2e-05
   EF-hand_4  3 kleeleikkyweifsglkped.nkltgdkvapvlknskleedklekiwdladidedgkldfeefciamrli 72
                +l + e + + e++++l  ed n + g+ + p l + +l+++ l+kiwd++d ++ g l  ++  +++r++
  EPX72271.1  6 QLTSAEQQAFDEMLQTLPVEDtNCFPGSVIGPFLMKFELPQKTLAKIWDFCDEEDKGYLTRNQAYVCLRFV 76
                567788889999999998776266889999******************************99999999986 PP

  == domain 2  score: 31.4 bits;  conditional E-value: 1.2e-10
   EF-hand_4  22 ednkltgdkvapvlknskleedklekiwdladidedgkldfeefciamrlifdlvngeikdvPselPewlvpeskah 98 
                 + n + ++ + p++ +s l++  l++iw+lad  + g l+ e+++ia +l++     ++ ++P++lP+++v ++k++
  EPX72271.1 148 NPNLMPSSIAKPLFLQSGLSTTVLAQIWNLADSGHVGYLNVEQYVIAKHLVMLCKKYNLVHLPRSLPSYVVDSAKSD 224
                 234555666789999************************************99999999*************99986 PP

  == domain 3  score: 36.3 bits;  conditional E-value: 3.6e-12
   EF-hand_4   8 eikkyweifsglkpedn.kltgdkvapvlknskleedklekiwdladidedgkldfeefciamrli 72 
                 + +++ ++f+ +++e++  +tgd++ p +  skl+ d+l+k+w++ad de g +   ef iam++i
  EPX72271.1 282 DRENFSKLFNKIDNENKgFITGDEAVPFFMASKLDPDELAKVWEIADKDEKGFIVKTEFLIAMQII 347
                 56778899999999886479********************************************98 PP

>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.74   8.8e+02       4      41 ..      49      85 ..      46      92 .. 0.66
   2 ?    4.9   0.0     0.031        37       3      25 ..     170     192 ..     168     225 .. 0.87
   3 !   22.6   0.2   8.9e-08   0.00011       6      71 .]     288     345 ..     283     345 .. 0.90
   4 ?   -3.2   0.0       9.9   1.2e+04      19      36 ..     562     583 ..     560     615 .. 0.62

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.74
   EF-hand_7  4 lkeaFkelDtdgdgyldkee.llrllrkifqgagegskl 41
                l  +++  D  + gyl++++ +   + ++ ++a  g++l
  EPX72271.1 49 LAKIWDFCDEEDKGYLTRNQaYV--CLRFVAQAQKGVPL 85
                66678999*********998444..33344444555555 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.031
   EF-hand_7   3 klkeaFkelDtdgdgyldkeell 25 
                 +l +++++ D+ + gyl++e++ 
  EPX72271.1 170 VLAQIWNLADSGHVGYLNVEQYV 192
                 78899**************9976 PP

  == domain 3  score: 22.6 bits;  conditional E-value: 8.9e-08
   EF-hand_7   6 eaFkelDtdgdgyldkee.llrllrkifqgagegsklsdeelellfkefDtdkdGvisfdEFlklyr 71 
                   F+++D+ + g+++ +e +  ++         +skl+++el ++++  D+d  G i  +EFl +++
  EPX72271.1 288 KLFNKIDNENKGFITGDEaVP-FFM--------ASKLDPDELAKVWEIADKDEKGFIVKTEFLIAMQ 345
                 56****************666.776........689999************************9996 PP

  == domain 4  score: -3.2 bits;  conditional E-value: 9.9
   EF-hand_7  19 ldkeellrllrkifqga....g 36 
                 +d++e+ +l ++i++++     
  EPX72271.1 562 IDPAEIDDLQQQISSSKfsldT 583
                 7888888888887744433330 PP

>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0         2   2.4e+03       2      20 ..      49      67 ..      48      71 .. 0.87
   2 ?    0.4   0.0      0.49   5.9e+02       3      23 ..     172     192 ..     170     194 .. 0.86
   3 !    9.6   0.2    0.0006      0.71       2      21 ..     286     305 ..     285     312 .. 0.87
   4 !    8.7   0.1    0.0011       1.3       1      27 [.     319     345 ..     319     347 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 2
                HHHHHHHHTTTSSSEEEHH CS
   EF-hand_1  2 lkeiFrefDkDgdGkIdfe 20
                l +i++  D    G+++++
  EPX72271.1 49 LAKIWDFCDEEDKGYLTRN 67
                56899999*******9976 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.49
                 HHHHHHHTTTSSSEEEHHHHH CS
   EF-hand_1   3 keiFrefDkDgdGkIdfeEfk 23 
                  +i++++D  + G+++ e+++
  EPX72271.1 172 AQIWNLADSGHVGYLNVEQYV 192
                 689*************99865 PP

  == domain 3  score: 9.6 bits;  conditional E-value: 0.0006
                 HHHHHHHHTTTSSSEEEHHH CS
   EF-hand_1   2 lkeiFrefDkDgdGkIdfeE 21 
                 + ++F+++D  + G+I+ +E
  EPX72271.1 286 FSKLFNKIDNENKGFITGDE 305
                 5689**************99 PP

  == domain 4  score: 8.7 bits;  conditional E-value: 0.0011
                 HHHHHHHHHTTTSSSEEEHHHHHHHHH CS
   EF-hand_1   1 elkeiFrefDkDgdGkIdfeEfkellk 27 
                 el ++++++DkD  G+I + Ef+ +++
  EPX72271.1 319 ELAKVWEIADKDEKGFIVKTEFLIAMQ 345
                 68899************9999998886 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0      0.12   1.5e+02       4      26 ..      51      73 ..      48      76 .. 0.80
   2 !   10.9   0.2   0.00029      0.34       3      21 ..     287     305 ..     285     312 .. 0.89
   3 !    6.4   0.0    0.0085        10       2      27 ..     320     345 ..     319     349 .. 0.89

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.12
   EF-hand_6  4 eaFklfDkdgdGkidaeElrkal 26
                ++++  D ++ G++++++   +l
  EPX72271.1 51 KIWDFCDEEDKGYLTRNQAYVCL 73
                788999**********9865555 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00029
   EF-hand_6   3 reaFklfDkdgdGkidaeE 21 
                  ++F+++D+++ G+i+ +E
  EPX72271.1 287 SKLFNKIDNENKGFITGDE 305
                 589**************99 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.0085
   EF-hand_6   2 lreaFklfDkdgdGkidaeElrkalr 27 
                 l +++++ Dkd  G+i + E+  a++
  EPX72271.1 320 LAKVWEIADKDEKGFIVKTEFLIAMQ 345
                 66788999**************9996 PP

>> UBA  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   5.4e-07   0.00064       3      37 .]     748     782 ..     746     782 .. 0.96

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 5.4e-07
                 HHHHHHHHHTTS-HHHHHHHHHHTTTSHHHHHHHH CS
         UBA   3 eeaiqrLveMGFdreevveALratgnNeErAveyL 37 
                 +e +q+L++MGF+++  + AL a +++ + A+++L
  EPX72271.1 748 SEILQELLSMGFPKDKSLIALTAVNYDANEAINIL 782
                 799******************************98 PP

>> HIP1_clath_bdg  Clathrin-binding domain of Huntingtin-interacting protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   7.1   4.8e-05     0.058      23      99 .]     568     647 ..     555     647 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 4.8e-05
  HIP1_clath_bdg  23 eeverekkeleeelerlkeeaerkle...eqkeelekLkreleakraelarlkssLesseqsgeqlssqlaaLqaEkesL 99 
                     ++++++ +  +++l+ +++++er  +   +qk +l+ L+ el++ +   ++ ++s++++ ++++qls+q+ +L + k +L
      EPX72271.1 568 DDLQQQISSSKFSLDTIQQSHERIASdvnQQKLHLQCLRDELTEISRLKETTQQSISRNLMTNQQLSAQVGSLTMDKREL 647
                     67777778888889999888887654444******************99*************************999876 PP

>> DivIVA  DivIVA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   2.5   0.00044      0.53      27      91 ..     581     649 ..     577     668 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00044
                 HHHHHHHHHHHHHHHHHHHHHHHCCCCTXXXXXXXXXXXXXX....XXXXXXXXXXXXXXXXXXXXXXX CS
      DivIVA  27 LdqvakdyeallkeneelkekvkeleeklkeykeleetLkkt....lvvaqetaeevkanakkeaelii 91 
                 Ld + ++ e++ ++++++k  ++ l+++l e + l+et +++    l+++q+ + +v + + ++ eli 
  EPX72271.1 581 LDTIQQSHERIASDVNQQKLHLQCLRDELTEISRLKETTQQSisrnLMTNQQLSAQVGSLTMDKRELIK 649
                 99*****************************99988775555222279999999999998888888875 PP

>> ADIP  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   4.3     0.046        55      74     126 ..     565     620 ..     544     622 .. 0.79
   2 ?    3.1   0.9     0.078        93      46      83 ..     621     658 ..     620     662 .. 0.86
   3 ?    8.6   0.1    0.0016       1.9       7      41 ..     750     782 ..     747     784 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.046
        ADIP  74 skierlktqleqlerelalvqakerqlekklktleqklknekeelq...rlknalq 126
                 ++i+ l++q ++++  l++ q+ +  +  ++ +++ +l+ +++el+   rlk + q
  EPX72271.1 565 AEIDDLQQQISSSKFSLDTIQQSHERIASDVNQQKLHLQCLRDELTeisRLKETTQ 620
                 78999*************99999999999999999888888887641116666655 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.078
        ADIP  46 qardrdleqreslnetirkleaeierlqskierlktql 83 
                 q+ +r+l ++++l++++ +l+ ++  l ++ + l t+ 
  EPX72271.1 621 QSISRNLMTNQQLSAQVGSLTMDKRELIKELKHLRTKI 658
                 67789999999999999999999999999999999886 PP

  == domain 3  score: 8.6 bits;  conditional E-value: 0.0016
        ADIP   7 INstLlsrGylrskllfdtatekveeniaaiinvi 41 
                 I ++Lls+G++++k l++ +   v+ + +++in++
  EPX72271.1 750 ILQELLSMGFPKDKSLIALT--AVNYDANEAINIL 782
                 5599**************99..8999999999997 PP

>> TPR_MLP1_2  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   8.2     0.001       1.2      23     115 ..     566     661 ..     550     664 .. 0.73

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.001
  TPR_MLP1_2  23 klqklqedlekqaeiakeaqqkYer...elvkhaedvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeelekelselekriedl 115
                 ++  lq+++ + + ++ + qq+ er    +++++  ++ l++  +e+++lk++ ++  +++  ++++l+++  s++  k el kel+ l+++i+++
  EPX72271.1 566 EIDDLQQQISSSKFSLDTIQQSHERiasDVNQQKLHLQCLRDELTEISRLKETTQQSISRNLMTNQQLSAQVGSLTMDKRELIKELKHLRTKIDEV 661
                 566677777777777777777666611145555555555555555558889999999999999999999999999999999999999999999986 PP

>> TMF_TATA_bd  TATA element modulatory factor 1 TATA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   6.5   0.00085         1      10      84 ..     584     662 ..     575     663 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00085
  TMF_TATA_bd  10 svqlverlsseirrlEgElaslkeelerleaerdeareeivklmkeneelkelkkel....eelekeleelqeryetlL 84 
                   +q  er+ s + +    l+ l++el+++++ ++++++ i + + +n++l+++ ++l    +el kel+ l+++ +++L
   EPX72271.1 584 IQQSHERIASDVNQQKLHLQCLRDELTEISRLKETTQQSISRNLMTNQQLSAQVGSLtmdkRELIKELKHLRTKIDEVL 662
                  578899************************************9999999988877651111566668888888877766 PP

>> FlaC_arch  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.1    0.0021       2.5       2      32 ..     567     597 ..     566     605 .. 0.93
   2 ?    1.2   0.1      0.41     5e+02       8      40 ..     594     627 ..     591     637 .. 0.81
   3 ?   -0.5   0.1       1.4   1.7e+03      12      41 ..     633     662 ..     629     663 .. 0.59

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0021
   FlaC_arch   2 idelEnklsklsteletvkkeneelsksvee 32 
                 id+l++++s+ + +l+t++++ e + ++v++
  EPX72271.1 567 IDDLQQQISSSKFSLDTIQQSHERIASDVNQ 597
                 89************************99975 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.41
   FlaC_arch   8 klsklsteletvkkeneelsksveelkenV.kdl 40 
                 ++++ +  l+ +++e+ e+s   e+ ++++ ++l
  EPX72271.1 594 DVNQQKLHLQCLRDELTEISRLKETTQQSIsRNL 627
                 6788888999999999999999888888885444 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 1.4
   FlaC_arch  12 lsteletvkkeneelsksveelkenVkdll 41 
                 ls +++++  +  el k+++ l  ++ ++l
  EPX72271.1 633 LSAQVGSLTMDKRELIKELKHLRTKIDEVL 662
                 555556666666666666666666666655 PP

>> DUF4600  Domain of unknown function (DUF4600)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   5.7    0.0022       2.7      16      82 ..     596     660 ..     568     661 .. 0.89

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0022
     DUF4600  16 NdqLekqiailkeklekirgnpsdrlasirvleklteeelnqllkqLekekkslenqlkdlelrleq 82 
                 N+q +  ++ l++ l +i++ ++  ++si   + +t+++l+  +  L+ +k++l ++lk+l+ ++++
  EPX72271.1 596 NQQ-KLHLQCLRDELTEISRLKETTQQSIS-RNLMTNQQLSAQVGSLTMDKRELIKELKHLRTKIDE 660
                 444.66788899999999999999999998.899*******************************95 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   2.9     0.024        29      62     118 ..     568     624 ..     564     631 .. 0.90
   2 ?    5.2   1.0     0.018        21      47      79 ..     630     662 ..     617     672 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.024
     DUF1664  62 rhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeavegleskle 118
                 ++L+++i +   +ld  ++  + i+++v++ + +l+ +++++++++++ e+ +++++
  EPX72271.1 568 DDLQQQISSSKFSLDTIQQSHERIASDVNQQKLHLQCLRDELTEISRLKETTQQSIS 624
                 57999****************************************999988888876 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.018
     DUF1664  47 skqleqvseslaatkrhLssridrvdkkldeqk 79 
                  +ql     sl+  kr+L ++++++ +k+de+ 
  EPX72271.1 630 NQQLSAQVGSLTMDKRELIKELKHLRTKIDEVL 662
                 4688888999********************975 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   3.1       0.1   1.2e+02       9      68 ..     566     625 ..     563     635 .. 0.84
   2 ?    4.9   0.2     0.033        40       2      35 ..     629     662 ..     628     671 .. 0.65

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.1
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHXXXXXXXXXXXXXXXX CS
        YabA   9 kleeleeqleelleeleelkeelaelleenaeLeleneklrerleeeekkekekkkelse 68 
                 ++++l++q+++ + +l++++++ +++  + ++ +l  + lr++l+e ++ ++++++++s+
  EPX72271.1 566 EIDDLQQQISSSKFSLDTIQQSHERIASDVNQQKLHLQCLRDELTEISRLKETTQQSISR 625
                 6899*************************9999***********7777766666666554 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.033
                 -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        YabA   2 dkkelfdkleeleeqleelleeleelkeelaell 35 
                  +++l +++ +l+ + +el +el++l++++ e+l
  EPX72271.1 629 TNQQLSAQVGSLTMDKRELIKELKHLRTKIDEVL 662
                 5566666666666666666666666666666665 PP

>> CENP-F_leu_zip  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0         5   5.9e+03      80      94 ..     509     523 ..     498     528 .. 0.74
   2 ?    4.7   9.4     0.023        28      20      98 ..     568     660 ..     564     669 .. 0.60

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 5
  CENP-F_leu_zip  80 sekeeLekelqkkqe 94 
                     + + +L+kelq+ q+
      EPX72271.1 509 EPNSNLAKELQTDQS 523
                     456788888888886 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.023
  CENP-F_leu_zip  20 dsLkdkvenLerelemseenqekvileaEtskaevetlkeeieelae...........el...releldLvalrsekeeLekelqkkqervse 98 
                     d L++++ + +  l +++++ e++  ++ ++k  ++ l++e+ e+++           +l   ++l++++ +l+ +k eL kel++ + +++e
      EPX72271.1 568 DDLQQQISSSKFSLDTIQQSHERIASDVNQQKLHLQCLRDELTEISRlkettqqsisrNLmtnQQLSAQVGSLTMDKRELIKELKHLRTKIDE 660
                     677777777777788888888888888888887777766665555431111001111133333566666666667777777777766666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (786 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1132  (0.0631379); expected 358.6 (0.02)
Passed bias filter:                      572  (0.0319036); expected 358.6 (0.02)
Passed Vit filter:                        87  (0.00485247); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.72u 0.27s 00:00:00.99 Elapsed: 00:00:00.42
# Mc/sec: 5661.10
//
Query:       EPX72272.1  [L=810]
Description: NatB N-acetyltransferase complex non catalytic subunit Arm1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.1e-67  226.2   6.0    6.1e-67  226.2   6.0    2.4  2  NatB_MDM20  N-acetyltransferase B complex (NatB) non catalyti
  ------ inclusion threshold ------
      0.013   16.0   2.0       0.85   10.2   0.1    3.4  3  DUF3802     Protein of unknown function (DUF3802)


Domain annotation for each model (and alignments):
>> NatB_MDM20  N-acetyltransferase B complex (NatB) non catalytic subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  226.2   6.0   6.8e-71   6.1e-67      26     350 ..     245     557 ..     209     591 .. 0.89
   2 !    2.4   0.5    0.0066        59      94     165 ..     711     788 ..     705     806 .. 0.79

  Alignments for each domain:
  == domain 1  score: 226.2 bits;  conditional E-value: 6.8e-71
  NatB_MDM20  26 kfieelikkeeakspksRnpyLArLelikrlrkrskkaeeektslsglvelileYfekfgsKlccfeDLkkYleeLskeerkeflekvsslsksesese 124
                 ++++el  +  +ks ++Rn +L  + +++               + +l ++i +Y+ k++ K++ feD+ ++l++Ls+e+++++l+      +s  e++
  EPX72272.1 245 TLVQELSHNALTKSCTQRNLHLFWIHFTSH------------FLNEELFNAISNYVLKMYAKPIVFEDIVPFLQHLSNESKAQLLKNFP--VESIPETN 329
                 456666666677778999999999999992............22233689*************************************99..55556777 PP

  NatB_MDM20 125 eekkekklrrlinalklerclgeheklseeekeelvtellaiYraslrlgaelletesqpsddlallaahalldlseks.....vdstlliqaillLef 218
                 +++k++kl++ + +lk+++++   e+++ee   ++++++ + Y+++l+l+++ l t+   + + +lla+hal+ ++e       v +  +++ai+lLe+
  EPX72272.1 330 KSQKIDKLVAKVLILKIRFFC--FESFTEEAITDFIQDCFNVYQDGLSLSDNILPTDFTHGYEALLLAVHALIYFKEYAslpsnVIPGIIFDAICLLEK 426
                 899***************555..599***************************************************999999999999********** PP

  NatB_MDM20 219 lltksphNfqlkLlLvrlYlll.GagslalklyskLdiKqiQlDtlghllftrlstlgpfskalslleqalrfYesaeketpesiakayekgsYskiee 316
                 +lt++ hNf+lkL L+rlYlll G +  a k+y++++iKq+Q+Dtl h+l+tr+ t  p+++  ++++ ++r+Y s+e etpe+i++aye+++Ys+ie+
  EPX72272.1 427 GLTNNLHNFHLKLPLIRLYLLLdGGFPAACKIYDTMSIKQVQNDTLDHYLLTRATTHFPSNLSAQYINASMRIYASNEFETPEMISNAYEEQAYSQIED 525
                 *************************************************************************************************** PP

  NatB_MDM20 317 fiefqerLknSlqramvaleerrlqrllggqydd 350
                 + +f++rL++S++++++ +e+ r+ +l +  y+ 
  EPX72272.1 526 MCQFRSRLDHSMWKSIILVERARCYYLNN--YKA 557
                 ************************99998..543 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.0066
  NatB_MDM20  94 LkkYleeLskeerkeflekvs......slskseseseeekkekklrrlinalklerclgeheklseeekeelvtella 165
                 L++++ ++s++++kefl + +      +++  +++s ++ k+k+ r+l++ l    +l++++  +    +++++++++
  EPX72272.1 711 LNSFVFYVSSSKKKEFLREYQglknviNSKLGSITSVSKYKKKNARKLVSELLSHSWLNKSSLKQVPFDQKFAKQIME 788
                 78899999*************9999998888889999999*********99999999966666665556666655554 PP

>> DUF3802  Protein of unknown function (DUF3802)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0     0.023     2e+02      13      66 ..     491     542 ..     488     553 .. 0.87
   2 ?   10.2   0.1   9.4e-05      0.85      51     109 ..     682     739 ..     670     742 .. 0.89
   3 ?   -0.1   0.0      0.14   1.3e+03      77     103 ..     760     786 ..     757     794 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.023
     DUF3802  13 eyltenLalFekssekataeetveelveeqlaenlivvceqnpeLskeqRlkvv 66 
                 +y+  ++ ++++++ +  + e++ +  eeq  +++  +c+ ++ L+++   +++
  EPX72272.1 491 QYINASMRIYASNEFE--TPEMISNAYEEQAYSQIEDMCQFRSRLDHSMWKSII 542
                 7888999999888877..899**********************99998766665 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 9.4e-05
     DUF3802  51 ceqnpeLskeqRlkvvrevDaivaDLeevLakvlnkkateeqeaFieefigLiknlfDs 109
                 + q  + ++++ l+v+    +i++DL   L + +   +++++++F++e+ gL kn+++s
  EPX72272.1 682 LTQSLQYENSTSLAVITKQTEILNDLITCLNSFVFYVSSSKKKEFLREYQGL-KNVINS 739
                 5788888999999**************************************8.888776 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.14
     DUF3802  77 eevLakvlnkkateeqeaFieefigLi 103
                 +e+L++ + +k++ +q+ F + f++ i
  EPX72272.1 760 SELLSHSWLNKSSLKQVPFDQKFAKQI 786
                 699****************99998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (810 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1011  (0.0563891); expected 358.6 (0.02)
Passed bias filter:                      494  (0.0275531); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.71u 0.27s 00:00:00.98 Elapsed: 00:00:00.46
# Mc/sec: 5284.26
//
Query:       EPX72273.1  [L=288]
Description: SURF-family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      3e-42  144.8   0.0    3.9e-42  144.5   0.0    1.1  1  SURF1     SURF1 family


Domain annotation for each model (and alignments):
>> SURF1  SURF1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.5   0.0   2.2e-46   3.9e-42       2     176 .]      48     258 ..      47     258 .. 0.82

  Alignments for each domain:
  == domain 1  score: 144.5 bits;  conditional E-value: 2.2e-46
       SURF1   2 vpvvvlfgLGtWQlqRlkwkealiaeleerlaaeplplleka.lealeefeyrrvtvtGrfdhdkevlvgngqprv.....Gylvltplrleddgeavl 94 
                 vp +++fgLGtWQ++R++wk+ +i++l+e+l+++p+pl+++  +++++++e+++  ++G+f +d+e+lvg   pr+     Gy+v+tp++l +dg+++l
  EPX72273.1  48 VP-IICFGLGTWQVKRREWKVGIIDTLTEKLKQKPVPLPTNLqESEIQDKEWTKLALKGTFCNDQEMLVG---PRTkdgntGYHVVTPFVL-EDGRRIL 141
                 67.9*********************************988885445569************99*******...88777888**********.78***** PP

       SURF1  95 VnrGWvpaea...eklpka....apegeevrevtGllr...ksstp......apeeesgewqvqsidvaalaealgaqkvlpvvl.............. 163
                 VnrGW++++    +         a+++++v+ ++Gllr   +  +p      +  +++g++  +++dv ++a   +   +lp+++              
  EPX72273.1 142 VNRGWISKSLsdpS----LrdsaAIPTNTVQ-IEGLLRkhtE--KPklminnD--PSTGSF--FFLDVHEFAGLKN---TLPILVtqlgpeltqsdeas 226
                 *******9775433....0344566656677.******5431..334455422..466655..********99965...78888566677777888888 PP

       SURF1 164 ...................hlgYaltWfglaa 176
                                    h++Y++tW++l++
  EPX72273.1 227 liqkgiplghpprveifnrHTEYIITWYSLSL 258
                 8889999999999999999***********95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       328  (0.0182944); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 2173.55
//
Query:       EPX72274.1  [L=171]
Description: histone H2A variant H2A.Z [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-16   61.4   0.0    1.4e-16   61.0   0.0    1.2  1  Histone        Core histone H2A/H2B/H3/H4
    9.2e-12   44.5   0.1    1.9e-11   43.5   0.1    1.5  1  Histone_H2A_C  C-terminus of histone H2A
     0.0048   17.1   0.0     0.0067   16.7   0.0    1.2  1  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a


Domain annotation for each model (and alignments):
>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.0   0.0   2.4e-20   1.4e-16      50     131 .]      51     132 ..      33     132 .. 0.93

  Alignments for each domain:
  == domain 1  score: 61.0 bits;  conditional E-value: 2.4e-20
                 HHHHHHHXXSXXSXHHHHHHHHHHHH.TTSSSXEEXHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTXSEEXHHHHHHHHHHT CS
     Histone  50 eirkyqkstdlliqklpfaRvvreivksekedlrisaeavlalqealEallvelfeeAnllakhaKRvTitpkDiqlArrlr 131
                  +r +++++++ + ++p+ Rv r ++ ++++++r+ a++ ++ +++lE+l++e++e+A+++ak+ K ++itp+++qlA+r++
  EPX72274.1  51 GERGQMSHSARAGLQFPVGRVRRFLKAKTQNNMRVGAKSAVYSAAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGD 132
                 5788899999999********9**********************************************************75 PP

>> Histone_H2A_C  C-terminus of histone H2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.5   0.1   3.1e-15   1.9e-11       1      32 [.     133     163 ..     133     165 .. 0.91

  Alignments for each domain:
  == domain 1  score: 43.5 bits;  conditional E-value: 3.1e-15
  Histone_H2A_C   1 EELnkLLggVTIAqGGVLPnIhkvLLpkktkk 32 
                    EEL++L++ +TIA+GGVLP+I+k LL   ++k
     EPX72274.1 133 EELDTLIR-ATIAGGGVLPHINKQLLIRTKEK 163
                    9*******.*****************766665 PP

>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   1.1e-06    0.0067       2      65 .]      65     129 ..      64     129 .. 0.96

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 1.1e-06
                    XXXHHHHHHHHHCC.TTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHHH CS
  CBFD_NFYB_HMF   2 eLPiarvkkImksd.pdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehiklAv 65 
                    ++P+ rv++ +k   +++ ++   + ++ a ++e    e+++ A   +k+ k K i++ h++lA+
     EPX72274.1  65 QFPVGRVRRFLKAKtQNNMRVGAKSAVYSAAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAI 129
                    69************999999*******************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       287  (0.0160076); expected 358.6 (0.02)
Passed bias filter:                      233  (0.0129957); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1347.40
//
Query:       EPX72275.1  [L=301]
Description: CMGC/CDK/CDC2 protein kinase Cdc2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.2e-74  249.2   0.0    4.8e-74  249.0   0.0    1.0  1  Pkinase        Protein kinase domain
      6e-30  104.4   0.0    7.5e-30  104.1   0.0    1.1  1  Pkinase_Tyr    Protein tyrosine kinase
    0.00022   20.7   0.1    0.00062   19.2   0.0    1.8  2  Kinase-like    Kinase-like
    0.00058   19.9   0.0     0.0017   18.3   0.0    1.7  2  APH            Phosphotransferase enzyme family
    0.00092   18.3   0.0     0.0066   15.4   0.0    1.9  1  Haspin_kinase  Haspin like kinase domain
     0.0034   16.5   0.0     0.0072   15.4   0.0    1.5  2  Seadorna_VP7   Seadornavirus VP7


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  249.0   0.0   1.6e-77   4.8e-74       1     264 []       4     293 ..       4     293 .. 0.90

  Alignments for each domain:
  == domain 1  score: 249.0 bits;  conditional E-value: 1.6e-77
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS....CTTB--EEEEEEESSEEEEEEE--TTEB..HHHHHH..H CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklk....hpnivrlyevfeekdelylvleyvegge..ladlle..r 91 
                 y+k+ek+GeG++G+Vyka++k++g+ivA+Kki+ e++++   ++++rEi++lk+++     +n vrl+++++ +++lylv+e+++ +   ++d+++   
  EPX72275.1   4 YVKVEKIGEGTYGVVYKAKHKSSGRIVAMKKIRLEDESEGVPSTAIREISLLKEVNdesnRSNCVRLLDILHAESKLYLVFEFLDMDLkkYMDRISetG 102
                 7899**************************************************99887789*********************9987444555555544 PP

                 HSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.BCTTTSCGGGS-HHHH.TTSCBSHHHHHHHHHHHHH CS
     Pkinase  92 kgslseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.ltsfvgtseYlAPEvl.keneyskkvDvWslGvily 188
                  ++l+++ ++k+a+q+++g++++Hs++iiHrDlKp+N+Lid++g+lK++DFGla+ +    + +t++++t +Y+APEvl ++++ys+ vD+Ws+G+i++
  EPX72275.1 103 ASALDPRLVQKFAYQLVNGVNFCHSRRIIHRDLKPQNLLIDKEGNLKLADFGLARSFGVPLRnYTHEIVTLWYRAPEVLlGSRHYSTGVDIWSVGCIFA 201
                 44599***************************************************9987777****************999***************** PP

                 HHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCT.SHH...HHHTTS......................-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 189 elltgkppfsgekgkekvekeldqlekilkilg.etkeklpeasei......................seeakdllkkllkkdpkkRltaeellqhpyl 264
                 e++ ++p+f+   g++    e+d+++ki+++lg +++e +p  + +                      +e a++ll+ +l +dp +R++a+ +lq+pyl
  EPX72275.1 202 EMIRRTPLFP---GDS----EIDEIFKIFQVLGtPNEEVWPGVTLLqdykstfprwkrvdlhrvipngEEAAIELLSAMLVYDPAHRISAKRALQQPYL 293
                 **********...666....8999999*****974444444444446666666666666**************************************97 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.1   0.0   2.5e-33   7.5e-30       4     200 ..       7     205 ..       4     223 .. 0.86

  Alignments for each domain:
  == domain 1  score: 104.1 bits;  conditional E-value: 2.5e-33
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHH.HHHHHHHHHHHHTS....-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHT. CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkeeateee.keelleeakimkkl....khpnivkllgvctkeepllivteyvkgGdLlkfLrkk. 95 
                   +k+GeG++G V++++ k    ++   Va+K+++ e ++e   +  ++e++++k++    +  n v+ll +   e++l++v+e+++  dL+k++ +  
   EPX72275.1   7 VEKIGEGTYGVVYKAKHK----SSGRIVAMKKIRLEDESEGvPSTAIREISLLKEVndesNRSNCVRLLDILHAESKLYLVFEFLDM-DLKKYMDRIs 99 
                  589*************99....88999******75555444388999*******9952223569*********************97.8999998874 PP

                  ..CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE.EEHHHHHHH CS
  Pkinase_Tyr  96 ..ekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk.ftsksDvWs 190
                      ++l+ + + +fa+q+ +G+++ +s++++Hrdl  +N L++++   k++DfGLar+       ++ +++ + + + apE+l  ++ +++  D+Ws
   EPX72275.1 100 etGASALDPRLVQKFAYQLVNGVNFCHSRRIIHRDLKPQNLLIDKEGNLKLADFGLARSF--GVPLRNYTHEIVTLWYRAPEVLLGSRhYSTGVDIWS 195
                  33566788888999**********************************************..66667778888999999***9876655********* PP

                  HHHHHHHHHT CS
  Pkinase_Tyr 191 fGvllwEift 200
                   G +  E++ 
   EPX72275.1 196 VGCIFAEMIR 205
                  *******987 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0       0.3   8.9e+02      14      49 ..       4      39 ..       2      76 .. 0.82
   2 !   19.2   0.0   2.1e-07   0.00062     145     240 ..     110     199 ..      73     277 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.3
  Kinase-like 14 lvrgellkkgdrsvvfevkdqetgeplavkvfllps 49
                 +v++e +++g  +vv+++k +  g  +a+k   l++
   EPX72275.1  4 YVKVEKIGEGTYGVVYKAKHKSSGRIVAMKKIRLED 39
                 6899999999********999999888888766655 PP

  == domain 2  score: 19.2 bits;  conditional E-value: 2.1e-07
  Kinase-like 145 arlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvlseve....kgfaPpEllgsrggytrknktkmthkldaWqlGl 238
                    +    ql++ +   +++ ++h +++++nll d++g l+l +f+  +  g   + + +       +  pE+l            +++ ++d W +G 
   EPX72275.1 110 LVQKFAYQLVNGVNFCHSRRIIHRDLKPQNLLIDKEGNLKLADFGLARSFGVPLR-NYTHeivtLWYRAPEVLLG--------SRHYSTGVDIWSVGC 198
                  4455567999**********************************98888887766.4443343355677776544........234677888888885 PP

  Kinase-like 239 vi 240
                   i
   EPX72275.1 199 -I 199
                  .3 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.42   1.2e+03       2      77 ..       7      87 ..       6     118 .. 0.63
   2 !   18.3   0.0   5.7e-07    0.0017     162     197 ..     112     157 ..      63     177 .. 0.69

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.42
                EEEE--.SSCEEEEEEETT.--EE.EEEE-TTS-HHHHH....HHHHHHHHHHHTT-..B--B-CTTBS-EEETTEEEEEEE-- CS
         APH  2 vrelsggasnrtylvttpa.gryv.lrrnpparaaeeir....revallrlLakagv..pvPevlagdtddeeigllfalieyv 77
                v+ ++ g++  +y+ ++++ gr v ++ ++ +++ e ++    re  ll+ +++      + ++l++   +  +   ++++e++
  EPX72275.1  7 VEKIGEGTYGVVYKAKHKSsGRIVaMKKIRLEDESEGVPstaiREISLLKEVNDESNrsNCVRLLDILHAESKL---YLVFEFL 87
                67788888888888888888777755555554333333322236777777777555567777777743333333...3444443 PP

  == domain 2  score: 18.3 bits;  conditional E-value: 5.7e-07
                 S............SS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-E CS
         APH 162 g............elptvllHgDlhpgNllvdpddgrvtGviDfedag 197
                                +++++H+Dl+p+Nll+d++++    + Df++a+
  EPX72275.1 112 QkfayqlvngvnfCHSRRIIHRDLKPQNLLIDKEGNLK--LADFGLAR 157
                 134444444666667899**************666665..88888875 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   2.2e-06    0.0066     204     256 ..     107     158 ..       1     187 [. 0.57

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 2.2e-06
  Haspin_kinase 204 swkqalsifwqivkiLyvaEtkfeFEHRdLhldniLvdknlnvtlidlklsRl 256
                    + + +++  +q v+ +    ++ +  HRdL+ +n L+dk++n  l d+ l+R 
     EPX72275.1 107 DPRLVQKFAYQLVNGVNFCHSR-RIIHRDLKPQNLLIDKEGNLKLADFGLARS 158
                    4455666666666666666555.566**************************6 PP

>> Seadorna_VP7  Seadornavirus VP7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       1.1   3.3e+03     235     267 ..      49      77 ..      32      87 .. 0.71
   2 !   15.4   0.0   2.4e-06    0.0072     157     188 ..     125     154 ..     112     172 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 1.1
  Seadorna_VP7 235 ikdlYldLdevasdfnveagtrltdlldrlevt 267
                   i++  l L+ev+++ n  +  rl d+   l+++
    EPX72275.1  49 IREISL-LKEVNDESNRSNCVRLLDI---LHAE 77 
                   455566.8888888888888777666...5554 PP

  == domain 2  score: 15.4 bits;  conditional E-value: 2.4e-06
  Seadorna_VP7 157 fhsestnllhGDcnpenlmcDknGylklvDPv 188
                    h  s  ++h D +p+nl+ Dk G+lkl D +
    EPX72275.1 125 CH--SRRIIHRDLKPQNLLIDKEGNLKLADFG 154
                   45..7889********************9965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (301 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       351  (0.0195772); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2115.89
//
Query:       EPX72276.1  [L=227]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.1e-10   39.3   3.1    1.2e-09   38.1   3.1    1.7  1  WW              WW domain
  ------ inclusion threshold ------
        7.6    6.5  20.9         53    3.7  20.9    2.1  1  DUF2076         Uncharacterized protein conserved in bacteria


Domain annotation for each model (and alignments):
>> WW  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.1   3.1   1.4e-13   1.2e-09       1      31 []       9      41 ..       9      41 .. 0.99

  Alignments for each domain:
  == domain 1  score: 38.1 bits;  conditional E-value: 1.4e-13
                X-TTEEEEE-TTTT-EEEEETTT..--EESS-- CS
          WW  1 LPpGWeeqwdpdsGrvYYyNheT..getqWekP 31
                LP+GW++qwdp++ r++Y+N++   ++ qW+ P
  EPX72276.1  9 LPDGWVAQWDPRYERYFYVNEKSskPQPQWDCP 41
                8******************************99 PP

>> DUF2076  Uncharacterized protein conserved in bacteria (DUF2076)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7  20.9    0.0059        53      91     206 ..      91     192 ..       4     224 .. 0.75

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.0059
     DUF2076  91 LsglFGggkkerpqpspqarpaapagqalgqeeqyaaqpgyaqqqaqpqygqpaaapqpggGggFLggAlqtA.AGVaGGvllangleslfsgksgeeg 188
                 +s l  gg+++  qp +  +p +   +++g   +y+a p  +   ++p+ g+   + + ggGgg L++ l t   G a+G l++ +  ++f +++++  
  EPX72276.1  91 FSRLHHGGSNQ--QPYYGGQPGYGGYPPYGGGPGYPAGPPGPGYGYAPAGGYGSRPSRFGGGGGLLSNPLMTGlGGLAAGGLAMHAFDDVFDRDNDN-- 185
                 44444455555..55555555555555555555555544444456677666666665579**********9984689***************97644.. PP

     DUF2076 189 aasasqsaeeeeiinnyy 206
                            ++++n+y
  EPX72276.1 186 -----------TVVENNY 192
                 ...........4444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       329  (0.0183502); expected 358.6 (0.02)
Passed bias filter:                      189  (0.0105416); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 1586.33
//
Query:       EPX72277.1  [L=370]
Description: CDC50 domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      7e-88  294.8   0.3    8.4e-88  294.5   0.3    1.0  1  CDC50     LEM3 (ligand-effect modulator 3) family / CDC50 fam


Domain annotation for each model (and alignments):
>> CDC50  LEM3 (ligand-effect modulator 3) family / CDC50 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  294.5   0.3   4.7e-92   8.4e-88       2     280 .]      59     355 ..      58     355 .. 0.89

  Alignments for each domain:
  == domain 1  score: 294.5 bits;  conditional E-value: 4.7e-92
       CDC50   2 lvasksvkeleidYtsecataaesek...................easkekktCtvqftvpedlkapvyvyYeLtnfyQnhrryvkSrddsqlkgkaks 81 
                 +vas++v+e+++dYt +c  a ++ +                   + ++e+++C ++f++pe+l ap+y +Y+LtnfyQnhrry +S+d  ql+g+ ++
  EPX72277.1  59 FVASQRVREVRLDYT-NCLGAGNTFTdipkknivyqmtgynnvsaKWRSENDHCYIRFHIPEKLGAPLYSFYRLTNFYQNHRRYTASVDVFQLRGEPRT 156
                 799************.9997777666999***************9999*************************************************65 PP

       CDC50  82 .s.lksssssdCepletakekkekkkiiyPCGliAnslFNDtfslvee.sssk.....ltkvnltkkgIawksdkekkfknktkyealeevvkPpnWak 172
                  + +k+    +C+pl+ +++     k++yPCGliAnslFNDtfs   + +s       l + ++t++g aw++dk +++ + t+y+a ++vv+PpnW k
  EPX72277.1 157 kEeIKE---GECSPLTVNED----GKPYYPCGLIANSLFNDTFSSLVRyDS-WdstssLDEYQMTSNGTAWPEDK-ERYIK-TSYNA-SDVVPPPNWSK 244
                 444543...36****86444....379****************54443222.12344488888************.56664.57877.9********88 PP

       CDC50 173 k.pe...eteipelkenedfivWmrtAalptFrKlyrrindeedLkagtyevdiennfpvksFkGtKsivlsttswlGgknpflgiaYlvvGgiclvla 267
                 + p+   +++ p+++++++++vWmr AalptF+Kl ++ n++++L++g yevdi ++fpv++FkGtKs++lstt+ +Ggkn+flgi+Y+v++g+ ++ +
  EPX72277.1 245 MyPDgynDENFPDISTWDELQVWMRIAALPTFSKLSKK-NTTTELESGIYEVDIGYHFPVTEFKGTKSFMLSTTTAIGGKNYFLGIMYMVIAGLNIASG 342
                 884456699*****************************.999********************************************************* PP

       CDC50 268 ivflvthlikprk 280
                 iv+ +++lik+r+
  EPX72277.1 343 IVLGIACLIKRRR 355
                 *********9885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (370 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       477  (0.0266049); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.44
# Mc/sec: 2498.43
//
Query:       EPX72278.1  [L=205]
Description: SWIM domain containing-Srs2 interacting protein 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.046   14.0   0.1      0.079   13.2   0.1    1.4  1  DUF3130   Protein of unknown function (DUF3130


Domain annotation for each model (and alignments):
>> DUF3130  Protein of unknown function (DUF3130
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   4.4e-06     0.079      11      69 ..       5      76 ..       1      84 [. 0.86

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 4.4e-06
     DUF3130 11 lekfatklkskksseylklkggnl.............sYskansindlrsaLielvdavekvqsvvkkDaer 69
                 e + tk ++++  e l+     +              Y   +s+ ++rs L++l+++ e+  +  k Da r
  EPX72278.1  5 TEIHNTKANNHNEQEILPSSSQFIrentegdlirtgnDYTLKKSCTKIRSVLSNLISILEEKIKNAKLDAVR 76
                56789999999999999988877777788888999999*********************9988888888865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       729  (0.0406604); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1482.63
//
Query:       EPX72279.1  [L=479]
Description: random septum position protein Rsp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      2e-17   63.0   0.1      2e-17   63.0   0.1    2.6  3  DnaJ         DnaJ domain
  ------ inclusion threshold ------
       0.93    9.5   4.5        2.4    8.2   4.5    1.7  1  Nore1-SARAH  Novel Ras effector 1 C-terminal SARAH (Sav/Rassf


Domain annotation for each model (and alignments):
>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.0   0.1   2.3e-21     2e-17       1      63 []      12      75 ..      12      75 .. 0.98
   2 ?   -2.2   0.1      0.53   4.7e+03      35      52 ..     190     207 ..     185     220 .. 0.62
   3 ?   -2.8   0.0      0.82   7.3e+03      30      56 ..     326     352 ..     326     354 .. 0.76

  Alignments for each domain:
  == domain 1  score: 63.0 bits;  conditional E-value: 2.3e-21
                HHHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHH.HHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ  1 dyYeiLgvskdasedeIkkaYrklalkyHPDknpkdp.eaeekFkeineAyevLsdpekRkqYD 63
                dyY++Lg++++++  +I+++Y kl+l++HPD+np+ + +   +F+ i++A+evL d + R+ YD
  EPX72279.1 12 DYYDVLGIESTSDYVQIRQQYLKLVLRFHPDRNPGREqDVIPHFQLIQRAHEVLRDGKLRELYD 75
                8********************************999989999*********************9 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.53
                 CHHHHHHHHHHHHHHHHH CS
        DnaJ  35 kdpeaeekFkeineAyev 52 
                 ++++a+++F+ +++    
  EPX72279.1 190 NNTNANNRFQPLSKFEAK 207
                 455999999998875444 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 0.82
                 TTTSCCHHHHHHHHHHHHHHHHHHTSH CS
        DnaJ  30 PDknpkdpeaeekFkeineAyevLsdp 56 
                 PD  ++ ++++e  +e+++    L  +
  EPX72279.1 326 PDSANSVSSSSEYHNELQNVLRSLERE 352
                 888877778888899999888887766 PP

>> Nore1-SARAH  Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   4.5   0.00026       2.4       6      19 ..     341     354 ..     340     363 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00026
  Nore1-SARAH   6 ELqnFLriLeeEEe 19 
                  ELqn Lr Le+EEe
   EPX72279.1 341 ELQNVLRSLEREEE 354
                  9************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (479 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       733  (0.0408835); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 3337.31
//
Query:       EPX72280.1  [L=296]
Description: ribosomal protein subunit S28 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.9e-26   91.1   0.9    3.9e-26   91.1   0.9    1.9  2  Ribosomal_S15  Ribosomal protein S15


Domain annotation for each model (and alignments):
>> Ribosomal_S15  Ribosomal protein S15
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.22   3.9e+03      41      52 ..      43      54 ..      39      80 .. 0.68
   2 !   91.1   0.9   2.2e-30   3.9e-26       3      80 ..     208     285 ..     206     286 .. 0.97

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.22
                   T-HHHHHHHHHH CS
  Ribosomal_S15 41 kDkhsrrgLlkl 52
                   k k+srr+ +++
     EPX72280.1 43 KQKASRRRKMNI 54
                   444555544443 PP

  == domain 2  score: 91.1 bits;  conditional E-value: 2.2e-30
                    HHHHHHSSSTT-TSSHHHHHHHHHHHHHHHHHHHHCTTT-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCTS CS
  Ribosomal_S15   3 elikefqrhekDtGspevqiallterInnltehlkenkkDkhsrrgLlklvskRrkllkYLkrkdverYkklieklgl 80 
                    + i+ f++ e+DtGspevq+a +t +I +l++h+++n+kD  ++r+L+  v++R+++lkYL+ kd+erY ++i++lgl
     EPX72280.1 208 TAIEYFAKTENDTGSPEVQAATFTSKILALKDHCNRNHKDQTAKRKLRFYVHQRQRMLKYLRLKDFERYMSCINNLGL 285
                    56899***********************************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (296 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1063  (0.0592894); expected 358.6 (0.02)
Passed bias filter:                      494  (0.0275531); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2209.79
//
Query:       EPX72281.1  [L=381]
Description: transport complex subunit Cog8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.2e-63  213.1  13.9    6.6e-63  212.4  13.9    1.2  1  Dor1         Dor1-like family
  ------ inclusion threshold ------
      0.011   16.2   2.6      0.019   15.4   1.2    2.1  2  KinB_sensor  Sensor domain of alginate biosynthesis sensor pr
      0.039   14.0   2.1       0.16   12.1   2.1    2.1  1  Myc-LZ       Myc leucine zipper domain
        1.1    9.4  11.8        1.5    8.9   6.3    2.8  3  Mod_r        Modifier of rudimentary (Mod(r)) protein
        1.6    7.2   3.2        2.8    6.5   3.2    1.3  1  FapA         Flagellar Assembly Protein A


Domain annotation for each model (and alignments):
>> Dor1  Dor1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  212.4  13.9   1.8e-66   6.6e-63       2     329 ..      17     372 ..      16     379 .. 0.92

  Alignments for each domain:
  == domain 1  score: 212.4 bits;  conditional E-value: 1.8e-66
        Dor1   2 selsskpleelekepelLaeeaeeilaqiqdLarknyktlidaaealeairqelediraqledLvlklpkLteectrfskkaeeisekrkenkllldkh 100
                 +el   p+  ++ e+e+L+  ae ++++      +nyktl++ ae + a  ++l++ ++  +++  k ++L ++  + ++++++is++++++ l+++ +
  EPX72281.1  17 QELIGRPFRDIKAEKEQLRRRAEILDQEKLSYLQSNYKTLVELAESQAATKELLSKTQDISKNIYGKRDELHNSTSQNQDFLSSISSHYQQALLMHRMQ 115
                 5677778888999***************99999****************************************************************** PP

        Dor1 101 eqllellelPqlmdrcirngyydealeLeayvsrLkqristnpviqsiaaeveetvqelleqLiqkLrsplqLaeclrvigYlrrvavlteaeLrlkfl 199
                 +q++++l +P+lmd cirn y++eale+++++ rL++r+ +n viq+++ +ve +  +l ++ + +L++pl+ ++++++++Ylr++ +l+eae+++ fl
  EPX72281.1 116 PQVSSVLRIPELMDSCIRNEYFSEALEFQGLANRLRDRFISNAVIQDLVYQVEGLSEKLSAKFLLQLQKPLKQYSLIKIVTYLRVTSKLSEAEIKYIFL 214
                 *************************************************************************************************** PP

        Dor1 200 qsrdavLek....ileeldtknasellkrlieivrvnlfdvllqYraifpdegst........................lrdlaseekaagdaifswvl 270
                    +++L++    +++ ld++n++ +lkr+ +++r+++f++l+qY+++f  e++t                          d +s +++ ++ +  +v+
  EPX72281.1 215 FYAWQQLQTslknLIPLLDYNNPELYLKRYLQVIRDRAFSLLFQYQSVFY-ESNTlftdsvsstidgvnfssndaptlpGLDHESLQSFSQNILTFFVH 312
                 ********9999999**********************************9.777778999999999999999999984434445556677777766999 PP

        Dor1 271 skissflqtlermlkrg.ievslekvldqlmyfaksfgrvgaDfrallpplleevvlntf 329
                 + +++   ++e++ +r+ +   ++++l ql y+ +s+ +vg D+++ l  +l +  ln +
  EPX72281.1 313 KIVKEICYVVETFFPRIhETTTRSSLLLQLYYCNQSLAKVGTDMTIHLYRILGKEWLNML 372
                 999999999999999998889999999999999999999999999999888877777665 PP

>> KinB_sensor  Sensor domain of alginate biosynthesis sensor protein KinB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   1.2   5.3e-06     0.019      57     114 ..      36      93 ..      16     103 .. 0.86
   2 ?    1.0   0.1      0.16   5.8e+02      59      83 ..      90     114 ..      84     153 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 5.3e-06
                  H--SHHHHHHHHHHHHHHHHH..HHHHHHHHHS-SSSSHHHHHHHHHHHHHHHHHHHH CS
  KinB_sensor  57 skvdeaerqaleqiasayrqflqalespatsrrelldnddlseafdklRnrLldlqkq 114
                  + ++  ++++l+  +s+y+++++ +es a +++ l + +d+s+++   R++L ++ +q
   EPX72281.1  36 RRAEILDQEKLSYLQSNYKTLVELAESQAATKELLSKTQDISKNIYGKRDELHNSTSQ 93 
                  455566899*******************************************998766 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.16
                  -SHHHHHHHHHHHHHHHHH..HHHH CS
  KinB_sensor  59 vdeaerqaleqiasayrqflqales 83 
                   ++++++ l+ i+s+y+q l + + 
   EPX72281.1  90 STSQNQDFLSSISSHYQQALLMHRM 114
                  5678888999999999987766554 PP

>> Myc-LZ  Myc leucine zipper domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   2.1   4.5e-05      0.16       7      21 ..      28      42 ..      27      51 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 4.5e-05
      Myc-LZ  7 lSekEqLRkrrEqLK 21
                ++ekEqLR+r E L 
  EPX72281.1 28 KAEKEQLRRRAEILD 42
                69**********984 PP

>> Mod_r  Modifier of rudimentary (Mod(r)) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   6.3   0.00041       1.5      14     104 ..      30     118 ..      10     121 .. 0.60
   2 ?    2.3   0.0     0.047   1.7e+02     100     142 ..     160     199 ..     144     203 .. 0.83
   3 ?    2.2   0.2     0.051   1.8e+02     101     142 ..     161     199 ..     157     249 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00041
       Mod_r  14 deeklealvktlpevkqlkeekeellaeneslaeknlslepeleelrselqekleelkelekefeekeqeldellqkfspdallarLqtav 104
                 ++e+l+++++ l++  +  +++++  ++ ++lae++ + ++ l + ++  ++ + + +el+++  + +  l+++++ ++++ l++r+q +v
  EPX72281.1  30 EKEQLRRRAEILDQ--EKLSYLQSNYKTLVELAESQAATKELLSKTQDISKNIYGKRDELHNSTSQNQDFLSSISSHYQQALLMHRMQPQV 118
                 34444444443333..222333444455566666666666666666666666666677777777777777777779999999999998776 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.047
       Mod_r 100 LqtavaeaeeeSealaeeflegeieldeFvkefkekRklyHlr 142
                  q  v + e +Se+l+ +fl    +l++ +k++   +   +lr
  EPX72281.1 160 IQDLVYQVEGLSEKLSAKFL---LQLQKPLKQYSLIKIVTYLR 199
                 5778889999*********9...77888888887777777776 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.051
       Mod_r 101 qtavaeaeeeSealaeeflegeieldeFvkefkekRklyHlr 142
                 q  v + e +Se+l+ +fl    +l++ +k++   +   +lr
  EPX72281.1 161 QDLVYQVEGLSEKLSAKFL---LQLQKPLKQYSLIKIVTYLR 199
                 6667788888888888888...66777777776666666665 PP

>> FapA  Flagellar Assembly Protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   3.2   0.00077       2.8     321     412 ..      13     105 ..       3     118 .. 0.76

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.00077
        FapA 321 gtkteievgldepelkeklkeleeeleel.eeeleklkkkikklpklkaekqlesekkeqlkklletkeklkeeleeleeelkelkeeleskk 412
                 ++ ++  +g  + ++k++ ++l+++ e l +e+l  l++++k l +l+++++ ++e +++ + + ++    ++el++ + + ++  +++ s++
  EPX72281.1  13 ESYLQELIGRPFRDIKAEKEQLRRRAEILdQEKLSYLQSNYKTLVELAESQAATKELLSKTQDISKNIYGKRDELHNSTSQNQDFLSSISSHY 105
                 555666678899999**************99*********99999999888878777777777777776666666666666666666665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (381 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1041  (0.0580624); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 2681.17
//
Query:       EPX72282.1  [L=384]
Description: histidinol-phosphate aminotransferase imidazole acetol phosphate transaminase His3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-62  212.3   0.0    1.3e-62  212.1   0.0    1.0  1  Aminotran_1_2    Aminotransferase class I and II
  ------ inclusion threshold ------
      0.022   13.6   0.0      0.034   13.0   0.0    1.2  1  Alliinase_C      Allinase
       0.13   10.7   0.1       0.45    9.0   0.1    1.9  1  Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme


Domain annotation for each model (and alignments):
>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  212.1   0.0   2.2e-66   1.3e-62      31     361 ..      43     371 ..      26     373 .. 0.93

  Alignments for each domain:
  == domain 1  score: 212.1 bits;  conditional E-value: 2.2e-66
                    HHHHTSTTST-BTTHHHHHHHHHHHHHC..TCTTCHTTGGEGEEEESHHHHHHHHHHHHHHHTTT-EEEEEESS-THHHHHHHHTTSEEEEEEBEE CS
  Aminotran_1_2  31 alaggtlneygpidglpeleealakflg..rseklklkreaavvvgsGagaliealifllklnpgdeilvpdptyasyknilrlsggevvryplys 124
                    + ag ++n+y++++ + e +++ +++ +    ++++lk+e + vvg G++++i+ li++ +++ +d+il++ p+y++y   +++++++vv + l+ 
     EPX72282.1  43 HDAGVEYNRYPDPR-QNEIKQRFCDLRNkeHPNAKPLKPE-NMVVGVGSDEIIDSLIRISCVPGKDKILACPPSYGMYPVSAKINDVQVVNVLLK- 135
                    4678899*******.*************8777799*****.****************************************************99. PP

                    TTTTEE-HHHHHHHHTTHHCTTETEEEEEEESS-TTT--B--HHHHHHHHHHHHHTTEEEEEEETTTTCBSSSSHTHHHHGGSTTSTTEEEEEESS CS
  Aminotran_1_2 125 eedfhldlealeealkeapegnkktkvilvesphNPtGtvatleeleklldlakkynlllfvDeaYagfvfgsldavatranveeepnllivgsls 220
                     +df ld++a+ + l+++  ++  +kv++ +sp NPt + ++l+ ++kll++ ++ n +++ DeaY +f++ ++ a   +++v+++pnl+++++ls
     EPX72282.1 136 -PDFDLDIDAVYDTLSKD--NS--IKVVFACSPGNPTAKTLNLNSIKKLLAHPTW-NGIVVMDEAYIDFASPEKTA---VSLVNDYPNLAVCQTLS 222
                    .***************94..45..5***************************999.99**************8754...99*************** PP

                    STTSSGGG-EEEEEEEHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS...TEEEECCSCSSEEEEEET CS
  Aminotran_1_2 221 KafGlaGeRvGyilgnaavvsqlrklsrpflsssllqaavaaalsdallkqseleemrqrlqkrrkelrdeLael...glkvlasqsgmflltdls 313
                    K+fGlaG+R+G++l n+ ++  +++l++p+++s++ ++++ +als +    s++ e r+r  ++r++l++eL+ +   g ++ + +++++l+++ls
     EPX72282.1 223 KSFGLAGIRIGFCLTNPQIATIMNSLKAPYNISEPSSRLAIKALSPESV--SKMYEHRDRALAQRERLCKELTTIpgvGKIIGGFDANFILVQVLS 316
                    **********************************************994..6************************9999999999********** PP

                    HH........CHHHHHHHHHHT.CTEEEEEGGGGTSTTEEEEECTTS-HHHHHHHHH CS
  Aminotran_1_2 314 ae........takelskkLlee.vgvyvtpgtsftvpgrlRitvAglteeeleelve 361
                    +          ak ++ k+++  + v+ ++gt++ ++g+lR+tv  +te+e+  l++
     EPX72282.1 317 KPmngvpsneVAKFVYLKMATDyKIVVRFRGTEPMCEGSLRMTV--GTESEVSALLK 371
                    **999999876666677777772556668***************..99999988876 PP

>> Alliinase_C  Allinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   5.8e-06     0.034      68     208 ..      82     237 ..      72     249 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 5.8e-06
                  EEEEECHHHHHHHHHHHHHHHH..SSSSSEEEEE-SS--THHHHHTTTT-BTTEE......EEEESTT-.--S..S-EEEEE..ESS-TTT--.---- CS
  Alliinase_C  68 yivvGtGstqLlqalvyalspeasseskpvkvvaavPyysvykeqtslldsklyk......weGdaaayvkkknpeefielv..tsPnnPdgl.lrea 156
                   +vvG+Gs +++++l+  +s        + k++a  P y +y   +++ d +  +      ++ d  a  ++ ++++ i +v   sP nP ++ l  +
   EPX72282.1  82 NMVVGVGSDEIIDSLI-RISCV----PGKDKILACPPSYGMYPVSAKINDVQVVNvllkpdFDLDIDAVYDTLSKDNSIKVVfaCSPGNPTAKtLNLN 174
                  6899*****9999876.45655....56789***********99888776654432211226666666558888888888874479****97533333 PP

                  --......-TT-EEEEEE-TT-...STTTS---S-B--.SEE.EEEHHHHHS-GGG-EEEEEE CS
  Alliinase_C 157 vv......kgseakviyDlayY...WPhytpitskade.dim.LftlskltGhaGsrlGWalv 208
                   +       + +++v+ D ay     P+ t++   +d  ++    tlsk  G aG+r+G+ l 
   EPX72282.1 175 SIkkllahPTWNGIVVMDEAYIdfaSPEKTAVSLVNDYpNLAvCQTLSKSFGLAGIRIGFCLT 237
                  22122245567899******96333699999999888535541579**************986 PP

>> Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.1   7.5e-05      0.45     130     175 ..     146     194 ..      32     202 .. 0.66

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 7.5e-05
                      HHHHCCT.TEEEEEEESS-TTTT----HHHHHHHHHHTT..-EEEEEGT CS
  Cys_Met_Meta_PP 130 lekaike.ntklvylEtptnpllkvvDiekiaklakkag..vlvvvDnt 175
                        +  k+   k+v+  +p+np+ k++ +++i kl  +     +vv+D +
       EPX72282.1 146 YDTLSKDnSIKVVFACSPGNPTAKTLNLNSIKKLLAHPTwnGIVVMDEA 194
                      3344444468*********************997544332466777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (384 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       365  (0.0203581); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.22s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 2625.61
//
Query:       EPX72283.1  [L=503]
Description: mannosyltransferase complex subunit Alg2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.5e-26   91.8   0.0      1e-24   87.0   0.0    2.2  1  Glycos_transf_1  Glycosyl transferases group 1
    1.8e-14   54.1   0.0    2.8e-14   53.5   0.0    1.3  1  Glyco_transf_4   Glycosyltransferase Family 4
    2.8e-09   37.5   0.0    6.4e-09   36.3   0.0    1.7  1  Glyco_trans_1_4  Glycosyl transferases group 1
  ------ inclusion threshold ------
      0.014   15.8   0.0      0.031   14.7   0.0    1.5  1  Glyco_trans_4_4  Glycosyl transferase 4-like domain


Domain annotation for each model (and alignments):
>> Glycos_transf_1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.0   0.0   2.3e-28     1e-24      13     142 ..     217     373 ..     208     402 .. 0.86

  Alignments for each domain:
  == domain 1  score: 87.0 bits;  conditional E-value: 2.3e-28
                      TT-EEEEEESS-TTTTTHHHHHHHHHCCCCC...HCSCEEEEEES.......................STTHHHHHHHHHHHCTTCGGGEEECC CS
  Glycos_transf_1  13 ekkkiilsvgrlekeKgvdllikafallkkq...lnpnvklviaG......................ngeeekelkklaeelelsdnviflgev 81 
                      + +k+++sv+r+e +K+++l+i++f  l++    + +++ lviaG                      +g   +++k+   +l +  ++++l+ +
       EPX72283.1 217 TSRKLLISVNRFELKKDIALAIESFSALRDLssdQFSDYLLVIAGgfdtrvtenrkylellqnlckqKGFSYHTVKDDWNNLSIDPQTNVLFLL 310
                      67899***********************9989999******************99999999999988777888888888888887666666555 PP

                      H.SSSHH.HHHHCESEEEEEESSBSS-HHHHHHHHTT--EEEETTTTHCHHCHTTTSEEEE-T CS
  Glycos_transf_1  82 s.redle.ellknadifvlpsisEgfGivllEAmaaglpviasnaggpaevvkdgetGllvkp 142
                      s ++d+  +l++ ++i++++ ++E+fGiv+lEAm  ++pv+a ++ggp+e+v dg+tG+l + 
       EPX72283.1 311 SvPSDVRdALISTSKILLYTPENEHFGIVPLEAMLRKVPVLAQANGGPLETVYDGKTGWLRPR 373
                      5556665156666**********************************************9765 PP

>> Glyco_transf_4  Glycosyltransferase Family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.5   0.0   6.3e-18   2.8e-14       1     168 [.      25     201 ..      25     203 .. 0.81

  Alignments for each domain:
  == domain 1  score: 53.5 bits;  conditional E-value: 6.3e-18
  Glyco_transf_4   1 vGGverhvleLaraLarrGheVtvvtpgddgpleeev.........elvvrvprvplpllkrllrslafl.rrlrrllkrekpDvvHahspaalg 85 
                     +GG+er v++ a +L+ +G eV ++t++ d+ +  e+         +++  +p+  + +l  l  +++ + + l  l+k   +D + + +  +++
      EPX72283.1  25 IGGAERLVVDAAVGLQSLGKEVIIYTSHCDKTHCFEEirdgtlkveIYGDWLPSSIFGKLSILCSTVRQIyLTLVLLFKFRYYDAIFVDQLSTCV 119
                     7***********************************9999887777666666666655555555555444134555555559********99887 PP

  Glyco_transf_4  86 aallalrrrlgiplVltvHglye...krllkarlkplsrllralerrllrradrviavSeatadelrerygvppekitVipnGvDl 168
                      +ll  +      l +++H+++    k   +  +k+++  +  +e++ +r adr++++S++ta  +++ ++  ++++++i++ vD+
      EPX72283.1 120 PMLLLVC----RTLLFYCHFPDKylvKPGGGILKKLYRVPFDSFEAWSVRLADRIVVNSNFTASVFKKAFPKVRKPLRIIHPCVDV 201
                     7766555....59*********766644555577888899999****************************7779**********7 PP

>> Glyco_trans_1_4  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.3   0.0   1.4e-12   6.4e-09       2     129 ..     220     383 ..     219     388 .. 0.77

  Alignments for each domain:
  == domain 1  score: 36.3 bits;  conditional E-value: 1.4e-12
                      EEEEEES---GG.GTHHHHHHHHHHHH.....HH...EEEEEES---.......HHHHHHHTT-......................T.TEEEE- CS
  Glyco_trans_1_4   2 pvilfvGrleenvkgvdllleavpllr....kkd...vrlvivGdgp.rp....eeleelaagl......................eerveftG 61 
                      + ++ v r+ e +k + l +e + +lr    + +   + lvi+G+ + r     + le l+++l                      + +v f+ 
       EPX72283.1 220 KLLISVNRF-ELKKDIALAIESFSALRdlssD-QfsdYLLVIAGGFDtRVtenrKYLE-LLQNLckqkgfsyhtvkddwnnlsidpQTNVLFLL 310
                      668889999.5459*********999966432.145699*****54322123333333.444446777779999999999999988789***** PP

                      --.TH.HHHHHHH-SEEEE--..---SHHHHHHHHTT-EEEE-TGGGTTT--..TTSSEE--TT-HHHHHHHHH CS
  Glyco_trans_1_4  62 fv.ed.laellaaadvfvaPs..egfglkllEamaaglpvVatdvggiaevv..gengllvppgdpealaeail 129
                       v +d  ++l++ +++++ +   e fg++ lEam  ++pv a + gg+ e+v  g++g+l p +dp+ + + i 
       EPX72283.1 311 SVpSDvRDALISTSKILLYTPenEHFGIVPLEAMLRKVPVLAQANGGPLETVydGKTGWLRP-RDPKIWGNVIH 383
                      **97845566888899988887889**********************999999******996.78987766665 PP

>> Glyco_trans_4_4  Glycosyl transferase 4-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   6.9e-06     0.031       1     141 [.      26     178 ..      26     185 .. 0.67

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 6.9e-06
  Glyco_trans_4_4   1 gGigryvaelaraLaarGheVtvltpapapg.ape.le..edgvrvhrlpvprrpspladlaal.ralrrll.....rqrrerpdvvhahspta 84 
                      gG++r v + a +L+ +G eV ++t++ +    +e ++    +v++++ ++p +   ++ l+ l   +r++        + + +d + + ++ +
       EPX72283.1  26 GGAERLVVDAAVGLQSLGKEVIIYTSHCDKThCFEeIRdgTLKVEIYGDWLPSS--IFGKLSILcSTVRQIYltlvlLFKFRYYDAIFVDQLST 117
                      8************************66544423331332234677777777755..56777744234444212224233666789999999766 PP

  Glyco_trans_4_4  85 glaarlarrrrgiplvvtlhg.lllrrgsgavrrly....ralerrllrradavlvvseaea 141
                        +++l+ +r  + + +++ +  l+ +g+g ++ ly    + +e +++r ad+++v+s++ a
       EPX72283.1 118 CVPMLLLVCR-TLLFYCHFPDkYLVKPGGGILKKLYrvpfDSFEAWSVRLADRIVVNSNFTA 178
                      6666666635.44455555442778899999999995555556***************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (503 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       721  (0.0402142); expected 358.6 (0.02)
Passed bias filter:                      494  (0.0275531); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 3685.75
//
Query:       EPX72284.1  [L=2339]
Description: alpha-1,3-glucan synthase Mok12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.4e-18   64.9   0.4    5.7e-15   55.7   0.1    3.6  2  Alpha-amylase    Alpha amylase, catalytic domain
    1.2e-14   54.6   0.1    2.2e-14   53.7   0.1    1.4  1  Glyco_transf_5   Starch synthase catalytic domain
    3.3e-08   34.0   0.0    6.8e-08   33.0   0.0    1.6  1  Glyco_trans_1_4  Glycosyl transferases group 1
    3.6e-08   33.1   0.0      8e-08   32.0   0.0    1.6  1  Glycos_transf_1  Glycosyl transferases group 1
  ------ inclusion threshold ------
      0.017   15.1   0.0      0.045   13.8   0.0    1.6  1  Glyco_transf_4   Glycosyltransferase Family 4


Domain annotation for each model (and alignments):
>> Alpha-amylase  Alpha amylase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.7   0.1   1.6e-18   5.7e-15       1     330 [.     105     512 ..     105     515 .. 0.65
   2 ?   -3.2   0.0       1.3   4.6e+03     117     173 ..    1821    1878 ..    1797    1908 .. 0.68

  Alignments for each domain:
  == domain 1  score: 55.7 bits;  conditional E-value: 1.6e-18
                    --CHHHH..CTCCCCCCCT-SCEEE..-B-CE-S-TTTTSS-SCECCE-CCC--CCCCCCHHHHHHCTT-EEEEEE--SC--TTSCC......... CS
  Alpha-amylase   1 GDLkGii..ekLdYlkeLGvtaiwl..sPifkspqadhgYdiadytkidpefGtnedlkeLiskahekgikvilDlVvNHtsdehew......... 83 
                    GD+ G+     LdYl+++G++ai++  +P+ + p    gY   d+t +d++ Gt ++++  i k+he+g +v++Dl v   s+ +           
     EPX72284.1 105 GDIAGLAtpRSLDYLEGMGIKAIYIagTPFENLPWTPDGYSPLDFTLLDKHTGTLQEWHDSIMKLHERGFYVVIDLTVSTLSELSFFnnvsdsfan 200
                    77778762247**************66699999*******************************************98777776666666666666 PP

                    .........CHCCHHSTTSGGGCCC-E.................................ESS-STTC-........TTTTCSCEE.CTTTTCEEE CS
  Alpha-amylase  84 .........fkeslkkkgepkrdyyiwkegk...........................eekeppnnwks........lfdgsawey.dekaqeyyl 134
                              + ++k++++ ++d++  + g+                           +                  + d +a+ +   ++ +  l
     EPX72284.1 201 tsapfsttgYTMKYKNSQHFYSDFQLSN-GTeypctgpafwditglpindtadkemieQ-----I---TciqgdfdhYGDVEAFGNhPPWWRQ--L 285
                    8888777665555555666677777744.436999999999999999877666433221.....2...1333554445555555554445555..9 PP

                    SSS-TTS-BB-TTTCCCCCCCCCCCCCCCTTT.-SEEEETTCCCTTTCCCC.................................HCCHCCHHHHHH CS
  Alpha-amylase 135 hlflkklpdLnteneevrkelkdvvkfwlekg.idGfRlDvvkhvskveal.................................esngeflheftq 196
                      f++ ++ L    + v k+lk v+ + ++   +dG+R+D + ++   + +                                 + +  + ++ +q
     EPX72284.1 286 SNFASVQDRLRDWDPIVAKKLKHVACLAVKMLdVDGIRIDKATQITA-D-FlgswsssvrkcarevgkdnffipgevtsgadfgSIYIGRGRQADQ 379
                    99*********************8888888767*************9.2.2245566666666666666666666665555555333333344444 PP

                    HHHHHTCCGTT-EEEEE-TT-SCCCHCCCC-CGG-SICECCITTCGGGCC-CTSTTSB-SS-.HHHHHHHHHHH.HHHS-C..CCTTCEEES--TT CS
  Alpha-amylase 197 alnetvasrkevmtvgEvssdasedlrvyttearlelemvldfphldvaqkakikeqlksis.akklkellkkw.lkalee..aaeeavtflgnHD 288
                      ++ va  k  +   E++  ++ d ++++    +++   +++  l+++ k +++++l+  + a+ + ++l ++ l + +    + +    + n D
     EPX72284.1 380 RPENDVAALKTGYNQSEFFLRKEGDSALDSVSFHYSIYRAITL-LLGLQGKLFATYDLNRHDfAYMWRQMLIQDdLINANTgkLDPRHLYGVTNQD 474
                    4444444444444444554444444444443333333322222.2333334444555555554455555543320222222223444455556666 PP

                    S--HHHHTTSSTTTTHHHHHHHHHCCCTSSSEEEEETTCCCT CS
  Alpha-amylase 289 qeRilsrlgddsaeaekklklaaillltlrGvpviYyGeEig 330
                      R  s +g +     k+l  + i  l+++G+p iYyGeE+ 
     EPX72284.1 475 IFRWPSTTGGEY----KQLLGFFITHLLMPGIPLIYYGEEQN 512
                    666666666666....688888999999************96 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.3
                     TTTTCSCEECTTTTCEEESSS-TTS-BB-TTTCCCCCCCCCCCCCCCTTT-SEEE...ET CS
  Alpha-amylase  117 lfdgsaweydekaqeyylhlflkklpdLnteneevrkelkdvvkfwlekgidGfR...lD 173 
                     +f+gs   +de ++    +lfl+kl+dL ++n      +   ++   +k  +G+R   +D
     EPX72284.1 1821 VFHGSVTFTDEDGN--TRRLFLSKLDDLTSNNTMKSLSIDHFIRKHERKYFSGLRkqeID 1878
                     44454444445443..3689999*****99998777777777777777777777755555 PP

>> Glyco_transf_5  Starch synthase catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.7   0.1   6.2e-18   2.2e-14       2     214 ..    1173    1380 ..    1172    1405 .. 0.72

  Alignments for each domain:
  == domain 1  score: 53.7 bits;  conditional E-value: 6.2e-18
  Glyco_transf_5    2 ilfvasEv..apl...aktGGLadvvgaLpkaLaklghdvrvilPrygaikeekkeleevaelskaaedeveve.v.ekvkvaklkkdgvdvy 87  
                      +l+++ E+  + l   +k GGL+ +++ +++ L+ +  d+  ++P  + ++   ++l +  ++      ev+++ v + v++++ k ++++++
      EPX72284.1 1173 VLVATLEYdiPELslrVKIGGLGVMAQLMSQHLEIQ--DMVWVIPIISGLDYPFEQLSTEPKI------EVRIHdVdFIVNCYSYKLRNITYI 1257
                      56666666441223359****************997..7999999998888865443333333......6677754799999999999***** PP

  Glyco_transf_5   88 fldnpeff.dreg.lYgdkgedyednaerfalfsraalelleklgwkpdvihahDWhtalvpallkelykerglfkkiktvftiHNlayqgrf 178 
                      f++ + f+ + ++ +Y + + d  + a  ++ +++ ++e+ ++  +  d+ h++D+h al+p++l            i++++++HN ++qg +
      EPX72284.1 1258 FVQSEVFYmQSTKePYPS-KMDDLNSAMFYSTWNQCIAEVWRR--YPLDIYHVNDYHGALAPLYLLPEV--------IPVAVSLHNAEFQGLW 1339
                      ******88343337**54.777789999999*********999..689*****************9987........**************** PP

  Glyco_transf_5  179 pkdelaa.......lglpaedfekldglefygkvnflkagivy 214 
                      p  ++++       +++ +e +   d ++f + +n+l++ i y
      EPX72284.1 1340 PLRKVEEidcvcsiFNISREVC--ADYVQFGHVFNLLHSIISY 1380
                      *555433111211144443333..4555555566666666655 PP

>> Glyco_trans_1_4  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.0   0.0   1.9e-11   6.8e-08       2     109 ..    1465    1581 ..    1464    1609 .. 0.77

  Alignments for each domain:
  == domain 1  score: 33.0 bits;  conditional E-value: 1.9e-11
                       EEEEEES---GG.GTHHHHHHHHHHHH.H.HEEEEEES.....---...HHHHHHHTT-T.TEEEE---.THHHHH.HHH-SEEEE--..-- CS
  Glyco_trans_1_4    2 pvilfvGrleenvkgvdllleavpllrkk.dvrlvivG.....dgp.rpeeleelaagleerveftGfv.edlael.laaadvfvaPs..eg 82  
                       + ++fvGr   ++kg+dl+++ +p+l+++ +v++v +G      g+  +e+l+ ++a   ++ +f+  v + ++++ +a ad +++Ps  e 
       EPX72284.1 1465 QLLVFVGRW-SQQKGIDLIADLAPKLLAEyNVQIVTIGpvidlHGQfAAEKLQ-YIASCYPNKVFCRPVfTAVPPFlFAGADFALIPSrdEP 1554
                       579******.677**********999988669******444433555447886.666667999999999977777658**********999* PP

                       -SHHHHHHHHTT-EEEE-TGGGTTT-- CS
  Glyco_trans_1_4   83 fglkllEamaaglpvVatdvggiaevv 109 
                       fgl+++E    g+ ++ +++gg+  + 
       EPX72284.1 1555 FGLVAVEFGRKGVLCIGSRTGGLGYMP 1581
                       ********************9976643 PP

>> Glycos_transf_1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.0   0.0   2.2e-11     8e-08      15     167 ..    1464    1619 ..    1450    1624 .. 0.77

  Alignments for each domain:
  == domain 1  score: 32.0 bits;  conditional E-value: 2.2e-11
                       -EEEEEESS-TTTTTHHHHHHHHHCCCCCHCSCEEEEEES.......STTHHHHHHHHHHHCTTCGGGEEECCHSSSHHHHHHCESEEEEEE CS
  Glycos_transf_1   15 kkiilsvgrlekeKgvdllikafallkkqlnpnvklviaG......ngeeekelkklaeelelsdnviflgevsredleellknadifvlps 100 
                         ++++vgr + +Kg+dl+ +++++l +  + nv++v +G      ++   ++l++ a  + ++  ++   +      + l+  ad +++ps
       EPX72284.1 1464 AQLLVFVGRWSQQKGIDLIADLAPKLLA--EYNVQIVTIGpvidlhGQFAAEKLQYIASCYPNKVFCR-PVFTA--VPPFLFAGADFALIPS 1550
                       5789**********************96..7************9966666666777666666644444.33333..47889999******** PP

                       SSBSS-HHHHHHHHTT--EEEETTTTHCHHCHTTTSEEEE-TT..-HHHHHHHHHHHHHSH.HHHHHHHH CS
  Glycos_transf_1  101 isEgfGivllEAmaaglpviasnaggpaevvkdgetGllvkpn..naealaeairkllede.elrerlge 167 
                       + E+fG+v++E    g+ +i s +gg+  +   + +    +++    +++ +ai k+l+++ +lr+rl+ 
       EPX72284.1 1551 RDEPFGLVAVEFGRKGVLCIGSRTGGLGYMPGWWFQ-MASPNTghLLAQFENAISKALQSPaDLRARLRA 1619
                       **************************9888777773.333333345555667777777777666666665 PP

>> Glyco_transf_4  Glycosyltransferase Family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   1.3e-05     0.045      60     119 ..    1289    1341 ..    1236    1370 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1.3e-05
  Glyco_transf_4   60 flrrlrrllkrekpDvvHahspaalgaallalrrrlgiplVltvHglyekrllkarlkpl 119 
                        + ++++++r+  D+ H+++++ ++a l  l     ip+ +++H+ + ++l++     l
      EPX72284.1 1289 WNQCIAEVWRRYPLDIYHVNDYHGALAPLYLLP--EVIPVAVSLHNAEFQGLWP-----L 1341
                      224689999****************99988888..6***********9644443.....3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2339 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       676  (0.0377043); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.19u 0.32s 00:00:01.51 Elapsed: 00:00:00.51
# Mc/sec: 13670.43
//
Query:       EPX72285.1  [L=375]
Description: actin Act1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.5e-148  494.1   0.0   1.1e-147  491.9   0.0    1.7  1  Actin     Actin


Domain annotation for each model (and alignments):
>> Actin  Actin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  491.9   0.0  6.1e-152  1.1e-147       2     407 .]       3     375 .]       2     375 .] 0.99

  Alignments for each domain:
  == domain 1  score: 491.9 bits;  conditional E-value: 6.1e-152
       Actin   2 devsavVlDnGssttraGyagedaPkavipslvgkprgrkvea.....klyvgdealtkrpelevrspvedGvvedwdaveelwehvlkeelkvdpeeh 95 
                 +e+ a+V+DnGs++++aG+ag+daP+av+ps+vg+pr++  +      + yvgdea++kr+ l++++p+e+G+v++wd++e++w+h++++el+v peeh
  EPX72285.1   3 EEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVgmgqkDSYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEH 101
                 6899***********************************9988999999************************************************** PP

       Actin  96 pllltepplnppkqrekalEivfEkfkvpalylaksavlsafasgkstglvvDsGasvtsvvpVldGyvLkkairrsdlgGkaLteqlkellssknvev 194
                 p llte+plnp+++rek+++i+fE+f+ pa+y++ +avls++asg++tg+v+DsG++vt+ vp+++Gy+L +ai+r+dl+G++Lt++l+++l ++    
  EPX72285.1 102 PCLLTEAPLNPKSNREKMTQIIFETFNAPAFYVSIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILMER---- 196
                 **********************************************************************************************8.... PP

       Actin 195 tprylikkkkvveaessaekeelekltesyktleeeevleeiKesvcevsedpeg..deeksssspeksYeLPDgseiklgeeRfkvpEiLFdpsligs 291
                                           ++ ++t++e+e++++iKe++c+v+ d+e+  +++++sss eksYeLPDg++i++g+eRf++pE++F+ps +g 
  EPX72285.1 197 --------------------------GYTFSTTAEREIVRDIKEKLCYVALDFEQelQTAAQSSSLEKSYELPDGQVITIGNERFRAPEAMFQPSVLGL 269
                 ..........................9***************************988788888************************************ PP

       Actin 292 esaleeekskllgiselivaainacdvdlrpeLlanivvtGGnsllpglteRlekelaqlaskgvkvkiiapeeerkysaWiGGSiLAslgtfqqlwvs 390
                 e+a         g++e ++++i++cdvd+r++L+ n+v++GG++++pg+ +R++ke+++la++++kvki+ap+ erkys+WiGGSiLAsl+tfqq+w+s
  EPX72285.1 270 ENA---------GVHEATYNSIMKCDVDIRKDLYGNVVMSGGTTMYPGIADRMQKEIQALAPSSMKVKIVAPP-ERKYSVWIGGSILASLSTFQQMWIS 358
                 *99.........*************************************************************.************************* PP

       Actin 391 kqEYeEqGssvverkck 407
                 kqEY+E+G+ +v rkc+
  EPX72285.1 359 KQEYDESGPGIVYRKCF 375
                 ****************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (375 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       380  (0.0211947); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.29s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 2592.11
//
Query:       EPX72286.1  [L=421]
Description: meiotic forkhead transcription factor Mei4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.6e-34  116.0   0.0    1.9e-33  114.6   0.0    1.8  2  Forkhead  Forkhead domain


Domain annotation for each model (and alignments):
>> Forkhead  Forkhead domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.6   0.0   1.1e-37   1.9e-33       1      86 [.      79     164 ..      79     165 .. 0.94
   2 ?   -3.1   0.0      0.56     1e+04      16      41 ..     244     269 ..     243     278 .. 0.66

  Alignments for each domain:
  == domain 1  score: 114.6 bits;  conditional E-value: 1.1e-37
                 ------HHHHHHHHHHT-TTT-B-HHHHHHHHHCC-HHHHCC.-CCHHHHHHHHHHHHC--EEETT.-TT.SS--EEE--TTHHHHH CS
    Forkhead   1 skPpysYaaLIaqAiksspekkltLseIyefieenfpyyrtaakkgWqnSirhnLslnkcFekvpreeee.gkgslwtidpeseekf 86 
                 +kPp+sYa+LI  Ai+++p+++ltL++Iy++i+++f yy ++ + gWqnSirhnLslnk+F+kv +++ + +kg++wtidpe+ + f
  EPX72286.1  79 EKPPCSYATLIGLAILQTPDRQLTLNGIYTWIRNTFRYYLNH-DGGWQNSIRHNLSLNKAFVKVGKSKGKvSKGHYWTIDPEYVQGF 164
                 69**************************************95.**********************9777548*********987765 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 0.56
                 HT-TTT-B-HHHHHHHHHCC-HHHHC CS
    Forkhead  16 ksspekkltLseIyefieenfpyyrt 41 
                 k++++  ltLs+  + i+   p   +
  EPX72286.1 244 KQTNKSPLTLSSASNLIKAPEPPLTD 269
                 66778889999999888876665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (421 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       619  (0.0345251); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 2850.89
//
Query:       EPX72287.1  [L=541]
Description: CMGC/CDK/CDK9 protein kinase Cdk9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-68  231.5   0.0    1.4e-68  231.1   0.0    1.2  1  Pkinase        Protein kinase domain
    5.7e-33  114.3   0.0    8.5e-33  113.7   0.0    1.2  1  Pkinase_Tyr    Protein tyrosine kinase
     0.0022   17.7   0.1        2.1    7.9   0.0    2.3  2  FTA2           Kinetochore Sim4 complex subunit FTA2
     0.0065   15.8   0.0      0.012   14.9   0.0    1.4  1  Kinase-like    Kinase-like
     0.0066   15.4   0.1       0.04   12.9   0.1    2.0  1  Haspin_kinase  Haspin like kinase domain
  ------ inclusion threshold ------
      0.025   14.5   0.0       0.05   13.5   0.0    1.4  1  APH            Phosphotransferase enzyme family
      0.046   13.1   0.1      0.084   12.2   0.1    1.4  1  Kdo            Lipopolysaccharide kinase (Kdo/WaaP) family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  231.1   0.0   5.5e-72   1.4e-68       1     264 []      36     339 ..      36     339 .. 0.96

  Alignments for each domain:
  == domain 1  score: 231.1 bits;  conditional E-value: 5.5e-72
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEE........SSEEEEEEE--TTEBHHHHHH. CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfee........kdelylvleyveggeladlle. 90 
                 ye +eklGeG+fG+Vyk + ++tgk +A+Kki  + +++    +++rEi+ilk+l h+n++ l ++             ++y+v+ y++++ l  ll+ 
  EPX72287.1  36 YELMEKLGEGTFGEVYKSKYRATGKLYALKKILLHTEREGFPITAIREIRILKSLCHENVIALTDMTVVrankkqrkRGSIYMVTPYMDHD-LSGLLKn 133
                 7889*************************************************************987778999998899*********77.9999995 PP

                 HHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS..............BCTTTSCGGGS-HHHH.TTSCB CS
     Pkinase  91 rkgslseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk..............ltsfvgtseYlAPEvl.keney 174
                  +++++e ++k ++kq+l+g +ylH+  i+HrDlK +N+Lid++g lKi+DFGla+ ++++s               +t  v+t++Y++PE+l +e++y
  EPX72287.1 134 PSVKFTEPQIKCYMKQLLAGTKYLHDSLILHRDLKAANLLIDNHGFLKIADFGLARVIDEESYankypgisppnrreYTGCVVTRWYRSPELLlNERRY 232
                 6677*******************************************************999899****************************999*** PP

                 SHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCT.SHH...HHHTTS.......................-HHHHHHHHHHT-SSG CS
     Pkinase 175 skkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilg.etkeklpeasei.......................seeakdllkkllkkdp 249
                 ++++D+Ws+G+i++e++ gkp+++   g++    +ldql ki+++ g +t+ ++p+++++                        + +++l  ++l+ dp
  EPX72287.1 233 TTAIDMWSVGCIMAEMYKGKPIMQ---GSS----DLDQLDKIFRLCGsPTQSTMPNWEKLpgcegvrsfpahprtletaffsyGKAMTSLFGSILQLDP 324
                 ************************...555....8999999*****99999************************************************ PP

                 CCSTTHHHHHTSGGG CS
     Pkinase 250 kkRltaeellqhpyl 264
                  +Rl+a ++l+h+y+
  EPX72287.1 325 DERLSAGMALEHEYF 339
                 **************8 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.7   0.0   3.3e-36   8.5e-33       2     216 ..      37     265 ..      36     282 .. 0.82

  Alignments for each domain:
  == domain 1  score: 113.7 bits;  conditional E-value: 3.3e-36
                  EEEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEE.STTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEE.....SSSS.....EEEEEE--TTEBH CS
  Pkinase_Tyr   2 elgkklGeGafGkVvegtlkgekekkevkVavKtl.keeateeekeelleeakimkklkhpnivkllgvct.....keep.....llivteyvkgGdL 88 
                  el +klGeG+fG+V++ +++     +    a+K++  ++ +e      ++e++i+k+l h+n+++l+ + +     k  +     +++vt y+++ dL
   EPX72287.1  37 ELMEKLGEGTFGEVYKSKYR----ATGKLYALKKIlLHTEREGFPITAIREIRILKSLCHENVIALTDMTVvrankK--QrkrgsIYMVTPYMDH-DL 127
                  5789****************....444555565551666666668999******************99887777651..134566********98.9* PP

                  HHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEE..........EETTSSTSGGGGS.-HH CS
  Pkinase_Tyr  89 lkfLrkkekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddey..........vkkeeaklpvkWm.apE 175
                  +  L++  + k+t  ++ +++ q+ +G +yL++  ++Hrdl a N L++++ + ki+DfGLar i ++++           +++ ++ +  +W+ +pE
   EPX72287.1 128 SGLLKNP-SVKFTEPQIKCYMKQLLAGTKYLHDSLILHRDLKAANLLIDNHGFLKIADFGLARVIDEESYAnkypgisppnRREYTGCVVTRWYrSPE 224
                  *****99.*********************************************************7777765556666654444555577788879** PP

                  HH.HHSEEEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHH CS
  Pkinase_Tyr 176 sl.kekkftsksDvWsfGvllwEiftlgespypglkneevle 216
                   l +e+++t++ D+Ws G ++ E+++ g+  ++g ++ + l+
   EPX72287.1 225 LLlNERRYTTAIDMWSVGCIMAEMYK-GKPIMQGSSDLDQLD 265
                  8725566*****************99.777666666655555 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0    0.0012       3.1      15      51 ..      26      65 ..      24      86 .. 0.82
   2 !    7.9   0.0   0.00083       2.1     149     204 ..     119     173 ..      91     189 .. 0.74

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0012
        FTA2 15 pFdfsae.kdiefleyLgkglhsiVlkvkir..gkeYALK 51
                +F+   +  ++e++e Lg+g+ + V+k k+r  gk YALK
  EPX72287.1 26 RFQGCSHlSSYELMEKLGEGTFGEVYKSKYRatGKLYALK 65
                67766677899***************998873367****9 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.00083
        FTA2 149 eedgkkrpiraIVKelellkeqeelevsqlpkllrdlkklhklgIvvrDlkeenyi 204
                      ++ + ++ K+   +k  e+ +  ++++ll  +k lh + I++rDlk+ n++
  EPX72287.1 119 VTPYMDHDLSGLLKN-PSVKFTEPQIKCYMKQLLAGTKYLHDSLILHRDLKAANLL 173
                 455556666777777.778888888999***********************99976 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   4.7e-06     0.012      79     240 ..      82     245 ..      57     272 .. 0.69

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 4.7e-06
  Kinase-like  79 dhlrlll..pfdlvkiqkkkpfiqlkskesiywvvnallllpaasvdleilnkvlqkrsethkkletiarlllTlqlirlaanLqakglvhgkftvdn 174
                  + +r+l+  +++ v       ++++++k++     + +++ p +  dl  l k    +++ ++ + +i + ++  ql+    +L++  ++h ++++ n
   EPX72287.1  82 REIRILKslCHENVIALTDMTVVRANKKQRKR--GSIYMVTPYMDHDLSGLLK----NPSVKFTEPQI-KCYM-KQLLAGTKYLHDSLILHRDLKAAN 171
                  55666642255555555555555555555554..4777777888877765544....33333333333.2333.34455689**************** PP

  Kinase-like 175 llldekgglmlggftaLvragtkvvlsevekgfaPpEllgsrgg.....ytrk....nktkmthkldaWqlGlvi 240
                  ll d++g l++ +f+ L r+ ++   ++   g +Pp  +   g      y+      n+ ++t ++d W +G  +
   EPX72287.1 172 LLIDNHGFLKIADFG-LARVIDEESYANKYPGISPPNRREYTGCvvtrwYRSPelllNERRYTTAIDMWSVGCIM 245
                  **************8.666666666577778999985555444333487776433337889***********865 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.1   1.6e-05      0.04     109     258 ..      43     192 ..       9     200 .. 0.60

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.6e-05
  Haspin_kinase 109 seklssevyqtke..kdkevvlKviplevledvtiskelslkelkslklvkgtypglllllqd.kvlkekpdfyseqqlflvlllkdkGtdLeev. 200
                    +e+ ++evy+ k   + k  +lK+i l +  +        +   ++++++k    + ++ l d  v++ +   ++ ++ +++++  ++ +dL+ + 
     EPX72287.1  43 GEGTFGEVYKSKYraTGKLYALKKILLHTERE-----GFPITAIREIRILKSLCHENVIALTDmTVVRAN--KKQRKRGSIYMVTPYMDHDLSGLl 131
                    77778888877765566677788888754443.....233333333444444333334444440444444..555566666666777777777764 PP

  Haspin_kinase 201 klkswkqalsifwqivkiLyvaEtkfeFE....HRdLhldniLvdknlnvtlidlklsRles 258
                    k  s+k   +   ++     +a tk+  +    HRdL+  n L+d+++   + d+ l+R+ +
     EPX72287.1 132 KNPSVKF-TEPQIKCYMKQLLAGTKYLHDslilHRDLKAANLLIDNHGFLKIADFGLARVID 192
                    4444443.3333344444444555554433444**************************963 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.9e-05      0.05     162     199 ..     153     191 ..     130     193 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.9e-05
                 S...SS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-EEE CS
         APH 162 g...elptvllHgDlhpgNllvdpddgrvtGviDfedaglg 199
                 g     +  +lH+Dl+  Nll+d  ++ +  + Df++a++ 
  EPX72287.1 153 GtkyLHDSLILHRDLKAANLLID--NHGFLKIADFGLARVI 191
                 4555567899*************..5555579999999986 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   3.3e-05     0.084      30     155 ..      50     178 ..      36     197 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 3.3e-05
         Kdo  30 aalrkyyrggllgklskdlyrfk..lgrtravrEfrllkrLeeagvavpkpvaagavkvgleyrAll..lterlegaqdLedllakwae.laeelkral 123
                  + +ky+  g l  l k l+  +      +a rE+r+lk L ++ v +++ +      ++   r  +  +t  ++   dL  ll++ ++ + e   +  
  EPX72287.1  50 VYKSKYRATGKLYALKKILLHTEreGFPITAIREIRILKSLCHENVIALTDMTVVRANKKQRKRGSIymVTPYMD--HDLSGLLKNPSVkFTEPQIKCY 146
                 5556666666666666665544432334699***************99998877666666665555511566666..69******97777888888888 PP

         Kdo 124 lkavgrliaklhragvnHadlyaknillqqee 155
                 +k++ +  + lh+  + H+dl a n+l+++++
  EPX72287.1 147 MKQLLAGTKYLHDSLILHRDLKAANLLIDNHG 178
                 9999999*********************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (541 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       576  (0.0321267); expected 358.6 (0.02)
Passed bias filter:                      262  (0.0146132); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.58u 0.28s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 3617.81
//
Query:       EPX72288.1  [L=479]
Description: WDR8 family WD repeat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-05   25.2   8.3        3.1    8.8   0.0    6.7  6  WD40      WD domain, G-beta repeat
     0.0055   14.8   0.6        1.4    6.8   0.0    2.8  3  IKI3      IKI3 family
  ------ inclusion threshold ------
      0.013   15.4   0.3       0.46   10.3   0.0    3.0  3  eIF2A     Eukaryotic translation initiation factor eIF2A
       0.03   14.3   1.1       0.82    9.7   0.0    3.5  4  PD40      WD40-like Beta Propeller Repeat
       0.23   11.3   0.0          1    9.2   0.0    2.0  2  TruB_C    tRNA Pseudouridine synthase II, C terminal


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0     0.026        93      18      36 ..      17      35 ..       4      36 .. 0.80
   2 ?    3.4   0.0     0.045   1.6e+02       9      31 ..     138     167 ..     131     169 .. 0.74
   3 !    8.8   0.0   0.00085       3.1      14      26 ..     193     205 ..     182     218 .. 0.90
   4 ?    2.9   0.0     0.062   2.2e+02      15      36 ..     240     262 ..     231     264 .. 0.77
   5 ?    2.4   0.0     0.095   3.4e+02      14      38 .]     317     343 ..     306     343 .. 0.74
   6 ?    1.8   0.1      0.14   5.1e+02       3      25 ..     348     371 ..     346     399 .. 0.65

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.026
                EETTSSEEEEEETTSEEEE CS
        WD40 18 fspdgawlasGsdDgtvri 36
                 sp+g+w+as s+ g+v i
  EPX72288.1 17 ISPSGHWIASLSRSGHVLI 35
                79*****986588888866 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.045
                 SS..SSE.EEEEEETTSSE...EE..EEETT CS
        WD40   9 GH..ssv.tslafspdgaw...la..sGsdD 31 
                  H  +++  ++af+p++++   l+  sGs D
  EPX72288.1 138 SHpkNDIdQAVAFHPHSNLcsmLIrkSGS-D 167
                 5876779999********95543345566.4 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.00085
                 EEEEEETTSSEEE CS
        WD40  14 tslafspdgawla 26 
                 ts+++sp+g+wl+
  EPX72288.1 193 TSVSWSPNGQWLV 205
                 89*********97 PP

  == domain 4  score: 2.9 bits;  conditional E-value: 0.062
                 EEEEETTSSEEE.EEETTSEEEE CS
        WD40  15 slafspdgawla.sGsdDgtvri 36 
                  + +spd+++la ++  + t++i
  EPX72288.1 240 TIEWSPDSSLLAlCSLQNSTIYI 262
                 467*******9845546777766 PP

  == domain 5  score: 2.4 bits;  conditional E-value: 0.095
                 EEEEEETTSSEEEEEE...TTSEEEEEE CS
        WD40  14 tslafspdgawlasGs...dDgtvriWd 38 
                 + ++f+ +++++a +     ++ v iW+
  EPX72288.1 317 CKVSFNANSSFIA-SYtllQKNIVWIWN 343
                 47889******97.54344599999997 PP

  == domain 6  score: 1.8 bits;  conditional E-value: 0.14
                 EEEE.EESSSSEEEEEEETTSSEE CS
        WD40   3 clrt.ltGHssvtslafspdgawl 25 
                 cl t l  ++++ +l+++p ++ +
  EPX72288.1 348 CLDTiLIQQQPIEHLSWHPTSPHH 371
                 55552444478999*999999883 PP

>> IKI3  IKI3 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.19     7e+02     327     357 ..     169     198 ..     101     213 .. 0.59
   2 !    6.8   0.0    0.0004       1.4     119     155 ..     234     272 ..     226     282 .. 0.83
   3 !    5.0   0.3    0.0014       5.1     305     369 ..     314     377 ..     306     387 .. 0.69

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.19
                 XXXXXXXXXXXXXXXXXXXXXX...XXXXXX CS
        IKI3 327 vqlwtisNyhWYLKqelrysasegveevkWd 357
                 ++++ +s   WYL ++ ++++ ++++ v+W 
  EPX72288.1 169 LNFYQTSLDGWYLTRNYKLPTIDATS-VSWS 198
                 34444444444444444444444432.4444 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0004
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXX CS
        IKI3 119 iesGieaaawspdeellalvtgeekvvlm..trdfepis 155
                 +  G ++++wspd  llal + +++ +++  t++f pi 
  EPX72288.1 234 LHLGFSTIEWSPDSSLLALCSLQNSTIYIlnTQTFSPIF 272
                 667999***************998877665799999996 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.0014
                 XXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXX CS
        IKI3 305 eevqsLaWsadSevLavrl...edrvqlwtisNyhWYLKqelrysasegveevkWdpekpltLlvlte 369
                 +e  ++  +a+S+  a ++   ++ v +w        L   l   +++  e+++W+p++p++L++lt+
  EPX72288.1 314 HEHCKVSFNANSSFIASYTllqKNIVWIWNAR--SQCLDTILI--QQQPIEHLSWHPTSPHHLMILTK 377
                 55556777888888887443334445555543..344555555..6777888*************997 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0    0.0022       7.8     103     188 ..     145     230 ..      56     236 .. 0.67
   2 ?   10.3   0.0   0.00013      0.46      62     142 ..     192     275 ..     182     285 .. 0.81
   3 ?    0.3   0.0      0.15   5.4e+02      41      75 ..     339     372 ..     313     384 .. 0.73

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0022
                 --EEEE-TTSSEEEEE-TTSSS-EEEEEETT....TTEEEEEEE-TT--EEEE-TTSSEEEEEE-TTT-SSS-EEEEEETTTEEEEEEE- CS
       eIF2A 103 rNtiffspkgklvllaGfgnlaGeleiwdvk....kkkkiakaeaanatlvewspdgryvlTattaprlrvdngfkiwsysGklvykkef 188
                   ++ f+p+ +l  +   ++ +  l++++++     ++   k+   +at+v wsp+g++++    +    ++  ++++sy G  ++++e+
  EPX72288.1 145 DQAVAFHPHSNLCSMLIRKSGSDFLNFYQTSldgwYLTRNYKLPTIDATSVSWSPNGQWLVVQDIT----LNPIIHLFSYPGIFLFSYEV 230
                 4456666666665555555555556666666543334444556677899*********99865443....56666666666666666655 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00013
                 EEEEEE-TTSS-EEEEESSSSCEEEEEECSCEEEEEEEEES.....--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE CS
       eIF2A  62 ihdvaWspkskefaviyGkmpakvslfdlkvkviskleeqk.....rNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakae 142
                 +  v+Wsp+++ ++v     +  ++lf+  +  ++++e +        ti +sp   l++l+ ++n   ++ i+++++++ i +++
  EPX72288.1 192 ATSVSWSPNGQWLVVQDITLNPIIHLFSYPGIFLFSYEVEDdlhlgFSTIEWSPDSSLLALCSLQNS--TIYILNTQTFSPIFRLR 275
                 56899*****999998999999*******97777777655422222689****************98..89999999988777665 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 0.15
                 EEESSSTT--EEECCEESSS.EEEEEE-TTSS-EE CS
       eIF2A  41 lyliklkkkksevvelkkegpihdvaWspkskefa 75 
                 +++ +++++  +++ ++++ pi  ++W p+s + +
  EPX72288.1 339 VWIWNARSQCLDTILIQQQ-PIEHLSWHPTSPHHL 372
                 5556667777777767666.899999998886554 PP

>> PD40  WD40-like Beta Propeller Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       3.2   1.1e+04      15      24 ..      16      25 ..      14      25 .. 0.82
   2 ?   -1.2   0.0      0.59   2.1e+03      21      38 .]      58      76 ..      58      76 .. 0.86
   3 ?    9.7   0.0   0.00023      0.82      11      24 ..     192     205 ..     188     206 .. 0.86
   4 ?    0.3   0.0       0.2   7.3e+02      16      24 ..     243     251 ..     241     254 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 3.2
                EE-TTSSEEE CS
        PD40 15 sfSPDGkrla 24
                 +SP G ++a
  EPX72288.1 16 VISPSGHWIA 25
                5899999997 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.59
                SEEEEEEECT..TCEEEEE CS
        PD40 21 krlaFsSdRg.sGkpdIyv 38
                ++l +  +R+   +++I v
  EPX72288.1 58 NWLFWITRRDsPETTQICV 76
                599*******998898876 PP

  == domain 3  score: 9.7 bits;  conditional E-value: 0.00023
                 EEEEEE-TTSSEEE CS
        PD40  11 egaPsfSPDGkrla 24 
                  ++ s+SP+G++l+
  EPX72288.1 192 ATSVSWSPNGQWLV 205
                 6788********97 PP

  == domain 4  score: 0.3 bits;  conditional E-value: 0.2
                 E-TTSSEEE CS
        PD40  16 fSPDGkrla 24 
                 +SPD + la
  EPX72288.1 243 WSPDSSLLA 251
                 ****99887 PP

>> TruB_C  tRNA Pseudouridine synthase II, C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.0   0.00029         1      24      47 ..       9      32 ..       2      34 .. 0.84
   2 ?   -1.8   0.0      0.78   2.8e+03      34      43 ..     245     254 ..     244     258 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00029
                ---S-EEEE-TTS-EEEEEEEETT CS
      TruB_C 24 gikgvvAaiaPdGrliALleergg 47
                  ++++A+i P+G+ iA l + g+
  EPX72288.1  9 SLSPTYAVISPSGHWIASLSRSGH 32
                56899************8887776 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.78
                 TTS-EEEEEE CS
      TruB_C  34 PdGrliALle 43 
                 Pd +l+AL+ 
  EPX72288.1 245 PDSSLLALCS 254
                 999*****95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (479 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       383  (0.021362); expected 358.6 (0.02)
Passed bias filter:                      280  (0.0156172); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.58u 0.29s 00:00:00.86 Elapsed: 00:00:00.47
# Mc/sec: 3052.02
//
Query:       EPX72289.1  [L=401]
Description: mannosyltransferase complex subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.1e-91  306.0  16.4    5.6e-91  305.2  16.4    1.4  1  Glyco_transf_15  Glycolipid 2-alpha-mannosyltransferase
  ------ inclusion threshold ------
      0.072   13.7   0.2        2.4    8.8   0.2    2.7  1  Gly_transf_sug   Glycosyltransferase sugar-binding region con


Domain annotation for each model (and alignments):
>> Glyco_transf_15  Glycolipid 2-alpha-mannosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  305.2  16.4   6.2e-95   5.6e-91      54     324 ..      62     358 ..      34     359 .. 0.92

  Alignments for each domain:
  == domain 1  score: 305.2 bits;  conditional E-value: 6.2e-95
  Glyco_transf_15  54 enenAtllalvrnselakilrsikkvekrFnkkfnYpyvfindepftekfkekieklveeadvefgeipkeewsyPefideekaakareeladi 147
                         nAt+++l rns+l  +l s+k++ekrFn++fnYpyvf+nde ft++fke+++k+++ ++v+fg + +e w++P+ +d++  ++a  e + i
       EPX72289.1  62 PRMNATFMVLTRNSDLDGVLSSMKSIEKRFNQHFNYPYVFLNDESFTDEFKEAVQKVTQ-SKVQFGILGQELWDFPSTVDQDFIDEAIAEQVGI 154
                      344*****************************************************999.********************************** PP

  Glyco_transf_15 148 aygdsesyrhmcRyysGlfykhellkkydyYwRvePdiklycdieyDvfkymkdekkiygFtlslkeieetiktlWdstkkflke.nkefieek 240
                       y+++ sy+ mcR++s +fykh+l+++y++YwR+ePd+ + cdi yD f ym++ +k+ygF++++ke +et+++l+  t  + k  n   +e++
       EPX72289.1 155 VYANMPSYHKMCRFFSKQFYKHPLIQQYEWYWRLEPDVSFSCDISYDPFYYMQKYNKVYGFVIAIKELAETVPNLFRYTIAHKKAvN---LETT 245
                      ****************************************************************************99988777641...4455 PP

  Glyco_transf_15 241 nslsflsdddqd.............................tynlCeFwsnfeigdldffrseayekfFeylDskGgffYerWgdapvhsiavs 305
                      ++ +f  +dd d                              ynlC+Fwsnfei+ ldf+rs++y+++ + l+++Ggf+ erWgdapvhs+av 
       EPX72289.1 246 DFWRFFLNDDYDkhiqtlkekqkydqvfvlpeppleqidgeIYNLCHFWSNFEIARLDFYRSKEYNDYMNALEEAGGFWTERWGDAPVHSLAVG 339
                      5555555555555666666678899**************999**************************************************** PP

  Glyco_transf_15 306 lllpkdkihffedigyshd 324
                      lll+++++h+f+d+gy+h+
       EPX72289.1 340 LLLNRSQVHYFRDLGYQHS 358
                      *****************96 PP

>> Gly_transf_sug  Glycosyltransferase sugar-binding region containing DXD motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.2   0.00027       2.4       5      61 ..      84     183 ..      82     256 .. 0.67

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00027
  Gly_transf_sug   5 kkaieslakahpdyqvvvlskele...........................................kvrvaildlefllsdtpwfeeakkllpl 56 
                     +k+ie+ +++h +y +v+l++e+                                            +v ++  +++++ ++ + f++ + + pl
      EPX72289.1  84 MKSIEKRFNQHFNYPYVFLNDESFtdefkeavqkvtqskvqfgilgqelwdfpstvdqdfideaiaeQVGIVYANMPSYHKMCRFFSKQFYKHPL 178
                     8999*****************98888998988888888888888888888888888888888888884444444444444444434433333444 PP

  Gly_transf_sug  57 fials 61 
                      +++ 
      EPX72289.1 179 IQQYE 183
                     33333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       911  (0.0508115); expected 358.6 (0.02)
Passed bias filter:                      605  (0.0337442); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 2771.62
//
Query:       EPX72290.1  [L=300]
Description: heterotrimeric G protein beta subunit Git5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.8e-30  102.9  21.7      2e-07   31.6   0.4    7.1  7  WD40         WD domain, G-beta repeat
    5.4e-10   39.4   0.0      0.013   15.8   0.0    5.4  6  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
  ------ inclusion threshold ------
      0.018   14.0   0.0          5    6.0   0.0    2.4  2  Ge1_WD40     WD40 region of Ge1, enhancer of mRNA-decapping p
      0.019   14.1   0.0       0.43    9.6   0.0    2.3  3  VID27        VID27 C-terminal WD40-like domain
       0.04   13.2   0.1       0.26   10.6   0.1    2.3  3  WD40_like    WD40-like domain
       0.12   12.2   0.0       0.21   11.4   0.0    1.4  1  Lamp         Lysosome-associated membrane glycoprotein (Lamp)


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.1   0.00024      0.71      15      38 .]      24      46 ..       9      46 .. 0.81
   2 !    7.8   0.0    0.0021       6.3      13      36 ..      63      86 ..      56      87 .. 0.90
   3 !   16.5   0.7   3.8e-06     0.011       7      38 .]      99     130 ..      96     130 .. 0.91
   4 !   20.6   0.1   1.9e-07   0.00057       4      38 .]     137     173 ..     134     173 .. 0.82
   5 !   13.2   0.1   4.4e-05      0.13       6      38 .]     182     215 ..     177     215 .. 0.87
   6 !   13.0   0.0   4.9e-05      0.15       7      38 .]     225     257 ..     219     257 .. 0.83
   7 !   31.6   0.4   6.6e-11     2e-07       3      37 ..     263     298 ..     261     298 .. 0.95

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00024
                EEEEETTSSEEEEEETTSEEEEEE CS
        WD40 15 slafspdgawlasGsdDgtvriWd 38
                 +++s+dg++++s+    ++ +Wd
  EPX72290.1 24 KVDWSSDGRYILSSA-EDSLLVWD 46
                689*********877.99999998 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0021
                EEEEEEETTSSEEEEEETTSEEEE CS
        WD40 13 vtslafspdgawlasGsdDgtvri 36
                v  +afsp+   +a+G+ +++++i
  EPX72290.1 63 VMTCAFSPSAETIAAGGLNNSCKI 86
                66788************9***998 PP

  == domain 3  score: 16.5 bits;  conditional E-value: 3.8e-06
                 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 l GH ++++s+++ +++++l+s++ D+++ +Wd
  EPX72290.1  99 LVGHdGFISSCKYVDENHLLTSSG-DRSCILWD 130
                 67**777************99989.*******9 PP

  == domain 4  score: 20.6 bits;  conditional E-value: 1.9e-07
                 EEEEESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 
                 +++++GH ++v sl+f   ++ + +sG+ D+t r+Wd
  EPX72290.1 137 ITKYEGHtGDVMSLDFLTGNPNIfVSGGCDKTSRVWD 173
                 67899**888****977777775269988*******9 PP

  == domain 5  score: 13.2 bits;  conditional E-value: 4.4e-05
                 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 t++G  s+++s++  p+ + +a+G +Dgt + +d
  EPX72290.1 182 TISGNdSDINSVSLFPSETSFATGAEDGTSKCFD 215
                 66899888*****99999999********88776 PP

  == domain 6  score: 13.0 bits;  conditional E-value: 4.9e-05
                 EESS..SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   7 ltGH..ssvtslafspdgawlasGsdDgtvriWd 38 
                 +  +  ++v+s++fs++g++l+ ++  + + +Wd
  EPX72290.1 225 YPSQksKPVSSICFSKSGKFLIVAT-GNVCEVWD 257
                 55564456*************9999.*******8 PP

  == domain 7  score: 31.6 bits;  conditional E-value: 6.6e-11
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 +++tl+GH + v+s+  +p g+ lasGs+D tvr+W
  EPX72290.1 263 LVTTLSGHdNRVSSITLNPRGTTLASGSWDSTVRLW 298
                 6889****888************************* PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.035   1.1e+02      39      60 ..      20      41 ..       9      66 .. 0.77
   2 ?   -0.5   0.0      0.51   1.5e+03      41      66 ..      63      88 ..      43      93 .. 0.82
   3 ?    1.5   0.0      0.12   3.7e+02      45      89 ..     110     152 ..      99     154 .. 0.76
   4 !   12.9   0.0   3.5e-05      0.11      28      86 ..     170     235 ..     165     236 .. 0.85
   5 !   15.8   0.0   4.2e-06     0.013      30      88 ..     223     278 ..     220     280 .. 0.86
   6 !    8.1   0.0    0.0011       3.2      33      64 ..     266     297 ..     251     299 .. 0.82

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.035
  ANAPC4_WD40 39 sevrsLaWkpdgklLavaysdg 60
                 +++ ++ W+ dg+ +  + +d+
   EPX72290.1 20 GKIPKVDWSSDGRYILSSAEDS 41
                 68999*********99988876 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.51
  ANAPC4_WD40 41 vrsLaWkpdgklLavaysdgevrlld 66
                 v   a++p+ + +a +  +++++++ 
   EPX72290.1 63 VMTCAFSPSAETIAAGGLNNSCKIIP 88
                 66778999999999999999999985 PP

  == domain 3  score: 1.5 bits;  conditional E-value: 0.12
  ANAPC4_WD40  45 aWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                  ++  d++ L  +  d ++ l d+++++ + +++ ++ + v++l++
   EPX72290.1 110 KYV-DENHLLTSSGDRSCILWDIQKQTSITKYEGHTGD-VMSLDF 152
                  554.455556677899999***********99999885.887765 PP

  == domain 4  score: 12.9 bits;  conditional E-value: 3.5e-05
  ANAPC4_WD40  28 rvwtl.......eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtc 86 
                  rvw+l       + +++ds ++s++  p+++ +a + +dg+ + +d+ +   + +++ +++k v++
   EPX72290.1 170 RVWDLrtnsselTISGNDSDINSVSLFPSETSFATGAEDGTSKCFDIRTRSAIFEYPSQKSKPVSS 235
                  5666666665555679*****************************************999987776 PP

  == domain 5  score: 15.8 bits;  conditional E-value: 4.2e-06
  ANAPC4_WD40  30 wtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclg 88 
                  ++   +++++ v+s++++++gk+L va+  + +++ d+ s+++v +ls +++ +v++++
   EPX72290.1 223 FEY-PSQKSKPVSSICFSKSGKFLIVATG-NVCEVWDSASATLVTTLSGHDN-RVSSIT 278
                  555.5788999***************997.589**************98888.588775 PP

  == domain 6  score: 8.1 bits;  conditional E-value: 0.0011
  ANAPC4_WD40  33 eedkedsevrsLaWkpdgklLavaysdgevrl 64 
                  + +++d++v+s+  +p g+ La +  d++vrl
   EPX72290.1 266 TLSGHDNRVSSITLNPRGTTLASGSWDSTVRL 297
                  45789*************************98 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.0    0.0021       6.2     180     243 ..     179     238 ..     165     256 .. 0.80
   2 ?    6.0   0.0    0.0017         5     183     214 ..     266     298 ..     245     299 .. 0.80

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0021
    Ge1_WD40 180 gllkieeh.sliveaafspdGtalatasedGevkffqvyledeeeprCLheWkPhdGkslssllf 243
                 + l i+ + s i + ++ p  t+ at +edG+ k f +       +  + e+   + k++ss+ f
  EPX72290.1 179 SELTISGNdSDINSVSLFPSETSFATGAEDGTSKCFDIRT-----RSAIFEYPSQKSKPVSSICF 238
                 45666655379999**********************9964.....44567777777777777766 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.0017
    Ge1_WD40 183 kieehs.liveaafspdGtalatasedGevkff 214
                  ++ h   +++ ++ p Gt+la  s d +v+++
  EPX72290.1 266 TLSGHDnRVSSITLNPRGTTLASGSWDSTVRLW 298
                 455554389999*******************98 PP

>> VID27  VID27 C-terminal WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.0   0.00014      0.43     191     218 ..      22      49 ..      11      54 .. 0.88
   2 ?   -2.9   0.0      0.87   2.6e+03     276     296 ..     113     134 ..     108     148 .. 0.63
   3 ?    1.6   0.0     0.037   1.1e+02     160     207 ..     201     249 ..     180     260 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00014
       VID27 191 iigldvsadGrwvlatcktyllLiDali 218
                 i ++d s+dGr++l+ ++++ll+ Da+ 
  EPX72290.1  22 IPKVDWSSDGRYILSSAEDSLLVWDANT 49 
                 7899*********************975 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.87
       VID27 276 eettivtstGp.fvitwslkkv 296
                 +e+ ++ts+G+   i w+++k 
  EPX72290.1 113 DENHLLTSSGDrSCILWDIQKQ 134
                 5667777777524667777653 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.037
       VID27 160 yiavasekGdirlfdrlginaktalPal.gdpiigldvsadGrwvlatc 207
                   a ++e G  + fd     a  + P+  ++p+  ++ s  G++++ ++
  EPX72290.1 201 SFATGAEDGTSKCFDIRTRSAIFEYPSQkSKPVSSICFSKSGKFLIVAT 249
                 5688899999999999999999999986378************986544 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       1.2   3.7e+03       7     151 ..      26      51 ..      21      58 .. 0.51
   2 ?   10.6   0.1   8.6e-05      0.26       8     127 ..      68     193 ..      62     253 .. 0.63
   3 ?    2.1   0.0     0.033        98      11      74 ..     156     220 ..     145     282 .. 0.59

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.2
   WD40_like   7 diskkgslilyGgkddkctvlkleslesvsivesfedSvifvklldddlilvvtlDGtillslleneeevenekieedistvkviddklliGtnkGsiy 105
                 d s +g +il                                                                                         
  EPX72290.1  26 DWSSDGRYIL----------------------------------------------------------------------------------------- 35 
                 5555555544......................................................................................... PP

   WD40_like 106 vfskdlqleevllgqsseIkeikiennkiysLsesafivfdlfsqn 151
                                               s +e+ ++v+d+ + n
  EPX72290.1  36 ------------------------------SSAEDSLLVWDANTYN 51 
                 ..............................3344445555554444 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 8.6e-05
   WD40_like   8 iskkgslilyGgkddkctvlkleslesvsive.sfedSvifvklldddlilvvtlDGtillsllenee.evenekieedistvkviddk..lli.Gt.. 99 
                 +s+ ++ i+ Gg ++ c+++ ++  +   i   + +  +  +k +d++++l  + D   +l +++++  +++ e    d+   + + ++  + + G+  
  EPX72290.1  68 FSPSAETIAAGGLNNSCKIIPTDKPDADPIDLvGHDGFISSCKYVDENHLLTSSGDRSCILWDIQKQTsITKYEGHTGDVMSLDFLTGNpnIFVsGGcd 166
                 667777888888888888887766554444320334456668888888888888888887888877773334445556666665543321133323222 PP

   WD40_like 100 nkGsiyvfskdlqleevllgqsseIkei 127
                 ++  ++ +  + ++e +++g  s+I+++
  EPX72290.1 167 KTSRVWDLRTN-SSELTISGNDSDINSV 193
                 34445555555.5566666666666666 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.033
   WD40_like  11 kgslilyGgkddkctvlkleslesvsivesfedSvifvkllddd.lilvvtlDGtillsllenee 74 
                 + ++++ Gg d++ +v +l+++ s   + + +  +  v l   +  +  ++ DGt    +++   
  EPX72290.1 156 NPNIFVSGGCDKTSRVWDLRTNSSELTISGNDSDINSVSLFPSEtSFATGAEDGTSKCFDIRTRS 220
                 55677788888888888888887766666555555555544333255555666665555555444 PP

>> Lamp  Lysosome-associated membrane glycoprotein (Lamp)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   7.1e-05      0.21       9      72 ..     120     184 ..     113     221 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 7.1e-05
                 EETTEEEEEEEEEEEEEEEE.ECTTTT.CCEEEEE--CCCEEEEEE--SSEEEEEEEETTEEEEEE CS
        Lamp   9 tngngtCllaemglqlnvty.kkksnk.tvsrvfnlnPnktkasGsCekqsaeLkLnsesgtltft 72 
                 ++g++ C+l  ++ q  +t+ + + +  +  + ++ nPn   +sG+C+k+s+   L  +s++lt+ 
  EPX72290.1 120 SSGDRSCILWDIQKQTSITKyEGHTGDvMSLDFLTGNPNIF-VSGGCDKTSRVWDLRTNSSELTIS 184
                 457899***********998554444303445777788766.78*********9999999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (300 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       301  (0.0167884); expected 358.6 (0.02)
Passed bias filter:                      267  (0.0148921); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.45
# Mc/sec: 2002.07
//
Query:       EPX72291.1  [L=378]
Description: TPR repeat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00025   21.1   0.0    0.00045   20.3   0.0    1.3  1  TPR_9     Tetratricopeptide repeat
    0.00053   19.9   0.3      0.063   13.4   0.3    2.7  2  TPR_2     Tetratricopeptide repeat
     0.0022   17.7   0.0       0.15   11.9   0.0    2.4  2  TPR_1     Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   7.5e-08   0.00045       7      62 ..      44      99 ..      40     110 .. 0.88

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 7.5e-08
       TPR_9  7 reedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapda 62
                 ++++++ ++ +   l+++P+d    + RGl++ + G+++ A +d e++l+ + ++
  EPX72291.1 44 KKKRYSEVIKDCTFALMINPHDNKAAWRRGLAYLRIGHPELANRDWEHALDADSEN 99
                56888999999999************************************988765 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.012        70       4      34 .]      35      65 ..      32      65 .. 0.89
   2 !   13.4   0.3   1.1e-05     0.063       2      33 ..      67      98 ..      66      99 .. 0.90

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.012
       TPR_2  4 lynlGlayyklgdyeeAleafekAleldPnn 34
                + ++  + +k+++y e ++++  Al ++P++
  EPX72291.1 35 YLQRSFINLKKKRYSEVIKDCTFALMINPHD 65
                77889999*******************9986 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 1.1e-05
       TPR_2  2 ealynlGlayyklgdyeeAleafekAleldPn 33
                +a +++Glay++ g++e A +++e Al  d +
  EPX72291.1 67 KAAWRRGLAYLRIGHPELANRDWEHALDADSE 98
                57789**********************98876 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.0   2.5e-05      0.15      12      34 .]      43      65 ..      40      65 .. 0.93
   2 ?    3.4   0.0     0.012        73       6      32 ..      71      97 ..      71      99 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 2.5e-05
                HHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1 12 fklgkydeAleyyekALelnPnn 34
                +k+++y e ++++  AL +nP++
  EPX72291.1 43 LKKKRYSEVIKDCTFALMINPHD 65
                799******************86 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.012
                HHHHHHHHTT-HHHHHHHHHHHHHHST CS
       TPR_1  6 nlGnayfklgkydeAleyyekALelnP 32
                ++G+ay++ g ++ A  + e AL  + 
  EPX72291.1 71 RRGLAYLRIGHPELANRDWEHALDADS 97
                79***********99888888887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (378 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       772  (0.0430587); expected 358.6 (0.02)
Passed bias filter:                      492  (0.0274416); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 2588.15
//
Query:       EPX72292.1  [L=116]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-18   66.3   2.2    2.1e-18   66.3   2.2    2.9  3  DUF2423   Protein of unknown function (DUF2423)
  ------ inclusion threshold ------
      0.058   13.5   0.2       0.12   12.5   0.2    1.7  1  Mrr_N     Mrr N-terminal domain


Domain annotation for each model (and alignments):
>> DUF2423  Protein of unknown function (DUF2423)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.3   2.2   2.3e-22   2.1e-18       1      42 [.       1      42 [.       1      43 [. 0.97
   2 ?    0.7   0.0     0.073   6.5e+02      27      41 ..      49      63 ..      46      66 .. 0.81
   3 ?    0.4   1.0     0.089     8e+02      10      24 ..      95     111 ..      93     115 .. 0.77

  Alignments for each domain:
  == domain 1  score: 66.3 bits;  conditional E-value: 2.3e-22
     DUF2423  1 MAKSlRSkskkraravkRksvFgpvedaRteRLsaKLkelak 42
                MAKS+RSk+ +r+++ +R++vF+pv+d+Rt+RLsa L+++++
  EPX72292.1  1 MAKSARSKTVRRNKRALRANVFQPVVDERTKRLSAHLQDQVN 42
                **************************************9986 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.073
     DUF2423 27 daRteRLsaKLkela 41
                + R e++++K  e++
  EPX72292.1 49 ANRDEKIADKAVEEV 63
                679999999987765 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.089
     DUF2423  10 kkraravkRk..svFgp 24 
                 kk+ ++ kR+  + F++
  EPX72292.1  95 KKHLKQGKRQkqNSFAK 111
                 78889999987788877 PP

>> Mrr_N  Mrr N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.2   1.3e-05      0.12      35      65 ..      74     102 ..      31     112 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.3e-05
       Mrr_N  35 eeeraellpsgkqtrfknrvgWartyLkkag 65 
                 +e++ +  +sg  +r +nr +Wa+++Lk+ +
  EPX72292.1  74 DEDKPKISTSG--PRDNNRNRWAKKHLKQGK 102
                 45555555566..799************965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1106  (0.0616878); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 821.31
//
Query:       EPX72293.1  [L=192]
Description: rRNA processing protein Fcf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.5e-35  119.5   2.3    1.1e-34  118.8   2.3    1.4  1  Fcf1      Fcf1
    4.6e-13   49.5   0.3    9.6e-13   48.5   0.0    1.6  2  PIN_9     PIN like domain
      0.004   17.4   0.3     0.0068   16.6   0.3    1.4  1  Cdd1      Pathogenicity locus
  ------ inclusion threshold ------
      0.095   13.0   0.0        0.2   11.9   0.0    1.5  1  Imm-NTF2  NTF2 fold immunity protein


Domain annotation for each model (and alignments):
>> Fcf1  Fcf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.8   2.3   2.5e-38   1.1e-34       2      99 .]      91     186 ..      90     186 .. 0.97

  Alignments for each domain:
  == domain 1  score: 118.8 bits;  conditional E-value: 2.5e-38
                 HCTS-EEEEEEHHHHHHHHHCT..-HHHHHHHT.T.SEEE----SS---HHHHHHHHH-BTB-TT-EEEE-S-HHHHHHHHTSTT--EEEEE--EEEE- CS
        Fcf1   2 tLqakvkpliTqCviaeleklgkklkealkiak.t.ferlkCnhkkptsaddClvsvvkkkknkkryivAtqDkdlrrrlrkipgvPilyikrsvmvlE 98 
                 +L+ak+ p+iT+Cv+aeleklg +++ al+iak + +erl+C+h k+++addC+v++v    ++k+y+vAt+Dk+l++r+rkipgvPil ++++++ +E
  EPX72293.1  91 CLYAKTIPCITDCVMAELEKLGIRYRIALRIAKdErMERLPCSH-KGVYADDCIVNRVM---QHKCYLVATNDKNLKQRIRKIPGVPILSVASHKIKVE 185
                 9********************************978********.**************...49********************************999 PP

                 - CS
        Fcf1  99 k 99 
                 +
  EPX72293.1 186 R 186
                 6 PP

>> PIN_9  PIN like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1       1.2   5.2e+03      67      72 ..      22      27 ..       4      46 .. 0.51
   2 !   48.5   0.0   2.1e-16   9.6e-13       1     110 [.      67     174 ..      67     178 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1.2
       PIN_9 67 eiveae 72
                + ++++
  EPX72293.1 22 QRLQKK 27
                222222 PP

  == domain 2  score: 48.5 bits;  conditional E-value: 2.1e-16
       PIN_9   1 vilDtnaLmipvqfgvdifeelerll.gsvelvvpkavleELerlakagkgkertaakvalsL.aerceiveaeeekaDdailelakeldaavlvTnDr 97 
                 v++Dtn++    q ++++f+ l   l  ++   + + v++ELe+l      + r a ++a++  +er+   ++++ +aDd i++   + ++  ++TnD+
  EPX72293.1  67 VLIDTNFINFCLQQKIEVFDGLMSCLyAKTIPCITDCVMAELEKL----GIRYRIALRIAKDErMERLP-CSHKGVYADDCIVNRVMQHKCYLVATNDK 160
                 89***********************98888899************....668999*****998445544.4555599********************** PP

       PIN_9  98 eLkkrllek.gipv 110
                 +Lk+r+++  g+p+
  EPX72293.1 161 NLKQRIRKIpGVPI 174
                 ******98425665 PP

>> Cdd1  Pathogenicity locus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.3   1.5e-06    0.0068       9      69 ..      95     155 ..      89     165 .. 0.89

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.5e-06
        Cdd1   9 qdiPniGkalaedlvelGirsveelkgedpeelyeklekltgarhDpCvldvfrsvvkfae 69 
                 ++iP i   + ++l +lGir    l+  + e++ +  ++++g+  D C++   +    ++ 
  EPX72293.1  95 KTIPCITDCVMAELEKLGIRYRIALRIAKDERMERLPCSHKGVYADDCIVNRVMQHKCYLV 155
                 68999*********************************************99988777764 PP

>> Imm-NTF2  NTF2 fold immunity protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   4.4e-05       0.2      39     101 ..     107     167 ..      98     169 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 4.4e-05
    Imm-NTF2  39 eleaifeky.vsekkrkqgraislslseeptYdnneevldseeltknkiviitedlselkqkyR 101
                 ele++ ++y +  +  k  r + l +s+++ Y ++ ++++   + ++k+++++ + ++lkq+ R
  EPX72293.1 107 ELEKLGIRYrIALRIAKDERMERLPCSHKGVY-ADDCIVNR--VMQHKCYLVATNDKNLKQRIR 167
                 666666677555666788899***********.99999876..99******99998***99887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       792  (0.0441742); expected 358.6 (0.02)
Passed bias filter:                      513  (0.0286129); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 1276.00
//
Query:       EPX72294.1  [L=414]
Description: esterase/lipase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.5e-17   61.4   0.0    2.7e-09   36.7   0.0    2.1  2  Hydrolase_4    Serine aminopeptidase, S33
    6.3e-12   45.7   0.2    2.2e-07   30.8   0.2    2.1  2  Abhydrolase_1  alpha/beta hydrolase fold
    3.4e-07   30.4   0.1    1.6e-06   28.2   0.1    2.0  2  BAAT_C         BAAT / Acyl-CoA thioester hydrolase C terminal
    6.6e-07   29.0   0.0    1.3e-06   28.1   0.0    1.4  1  Peptidase_S9   Prolyl oligopeptidase family
    8.7e-07   27.9   0.0      0.028   13.1   0.1    3.1  3  AXE1           Acetyl xylan esterase (AXE1)
    0.00061   20.5   0.0    0.00097   19.8   0.0    1.3  1  Abhydrolase_6  Alpha/beta hydrolase family
     0.0021   17.7   0.0      0.013   15.0   0.0    1.9  1  DLH            Dienelactone hydrolase family
     0.0026   16.8   0.0     0.0038   16.2   0.0    1.2  1  DUF818         Chlamydia CHLPS protein (DUF818)
     0.0087   15.7   0.0      0.017   14.8   0.0    1.4  1  FSH1           Serine hydrolase (FSH1)
  ------ inclusion threshold ------
       0.16   11.5   0.0       0.29   10.7   0.0    1.5  2  Peptidase_S15  X-Pro dipeptidyl-peptidase (S15 family)
       0.16   11.6   0.0       0.25   11.0   0.0    1.3  1  Esterase       Putative esterase
       0.19   11.5   0.0        0.5   10.1   0.0    1.7  2  Abhydrolase_5  Alpha/beta hydrolase family


Domain annotation for each model (and alignments):
>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.7   0.0   1.8e-12   2.7e-09      29     134 ..     230     331 ..     204     340 .. 0.83
   2 !   23.2   0.0   2.4e-08   3.5e-05     187     232 ..     342     387 ..     327     390 .. 0.85

  Alignments for each domain:
  == domain 1  score: 36.7 bits;  conditional E-value: 1.8e-12
  Hydrolase_4  29 aqGfavyalDhrGhGrsegkrghvpsfddyvdDlaafvekvkeehpel..plfllGhSmGGliallyllrypdkvaglilsaPalkikaklkappllk 124
                  a G++v+++ +rG+Grs g     ++   +  D++++++ ++++   +  +++++G+S+GG++al+++ ++++ +++l+l +++ +ik +  +p +  
   EPX72294.1 230 ALGMNVFIISYRGYGRSTGS----SNELGMNIDAQTALDFLQQHPICSstNIVVYGQSVGGAVALSLASKNESLISALVLENTFTSIKDM--IPTVFP 321
                  5699*************544....446678889******99976665578**************************************87..566666 PP

  Hydrolase_4 125 lllkllgkll 134
                   +  ll++++
   EPX72294.1 322 YIGSLLSHFC 331
                  6666666655 PP

  == domain 2  score: 23.2 bits;  conditional E-value: 2.4e-08
  Hydrolase_4 187 aakitlPllllhGeaDkvvdpeasrelyerlgskdktlklypglyH 232
                   +  +lP+l+l+G++D++v+p + + ly  ++sk+k+l ++p+  H
   EPX72294.1 342 RKLHNLPVLFLSGAEDEIVPPPQMQLLYGLCPSKQKRLCIFPKSKH 387
                  334459*************************************999 PP

>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   0.2   1.5e-10   2.2e-07       1     106 [.     205     308 ..     205     325 .. 0.77
   2 !   13.0   0.0     4e-05      0.06     207     251 ..     338     388 ..     318     393 .. 0.76

  Alignments for each domain:
  == domain 1  score: 30.8 bits;  conditional E-value: 1.5e-10
                    SEEEEE-STTTCGGGGTTGHHHHHHHHT.TSEEEEEEETTSTTSSSTTTGB.CHHSHHHHHHHHHHH..HHHCTTSSEEEEEETHHHHHHHHHHHH CS
  Abhydrolase_1   1 pvlvilhGlpgssdvwaerglapaLakd.gfdvillDlrGvgySspapacinddygtasvaddldri..ldalgddkltlvGhSmGGmialayaae 93 
                    p+l+++h+ +g+ +      +a+ +  + g  v+++  rG+g+S+ ++++      +++ +  ld++         ++++ G+S GG++al +a++
     EPX72294.1 205 PTLLYFHANAGNMGHRLP--IARVFYSAlGMNVFIISYRGYGRSTGSSNELG---MNIDAQTALDFLqqHPICSSTNIVVYGQSVGGAVALSLASK 295
                    68999******6665444..455555555*******************9743...444577777766225557778888***************** PP

                    HGGGEEEEEEESE CS
  Abhydrolase_1  94 yperVkalvllga 106
                    + + ++alvl ++
     EPX72294.1 296 NESLISALVLENT 308
                    **********999 PP

  == domain 2  score: 13.0 bits;  conditional E-value: 4e-05
                    THHHHS....EEEEEEETTCSSSCH.HHHHHHHHCHTS..EEEEEEETCSSS CS
  Abhydrolase_1 207 lknvla....ptlvisgtsDplvpp.kaledlaqllpk..krlvvisdagHl 251
                    ++++ +    p+l++sg++D +vpp +++  + +l+p+  krl++++++ H+
     EPX72294.1 338 VRAIRKlhnlPVLFLSGAEDEIVPPpQMQLLY-GLCPSkqKRLCIFPKSKHN 388
                    4445556667***************5555555.7*99999**********97 PP

>> BAAT_C  BAAT / Acyl-CoA thioester hydrolase C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.2   0.1   1.1e-09   1.6e-06       7      54 ..     260     308 ..     259     323 .. 0.92
   2 ?   -1.5   0.0       1.3   1.9e+03     115     130 ..     346     361 ..     331     366 .. 0.83

  Alignments for each domain:
  == domain 1  score: 28.2 bits;  conditional E-value: 1.1e-09
                 HHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS.SEEEEEEES- CS
      BAAT_C   7 eeainyllrhpkvkkdkigllGiSkGgelalllasflk.kisavvling 54 
                 + a+++l++hp ++  +i ++G+S Gg +al+las+ +  isa+vl n 
  EPX72294.1 260 QTALDFLQQHPICSSTNIVVYGQSVGGAVALSLASKNEsLISALVLENT 308
                 579**********************************988999999875 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 1.3
                 -SEEEEEEETT-SSS- CS
      BAAT_C 115 kgpillvvgedDknwp 130
                 + p+l+++g +D+++p
  EPX72294.1 346 NLPVLFLSGAEDEIVP 361
                 6799********9987 PP

>> Peptidase_S9  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.1   0.0   8.6e-10   1.3e-06      11     186 ..     229     387 ..     222     407 .. 0.80

  Alignments for each domain:
  == domain 1  score: 28.1 bits;  conditional E-value: 8.6e-10
                   HCCT-EEEEE--TTSSTTHCHHHHTTSGGGGHHHHHHHHHHHHHHHHTTS--GGGEEEEEETHHHHHHHHHHHH-GGG-SEEEEESE---CCCHHCS CS
  Peptidase_S9  11 adrGyvvvvanirGsggyGeafhdagkrklgqnefdDfiaaaealakegyvdserlaitGgSyGGyltgaalnqrpdlFkaavaevpvvdvlrydsd 107
                   +++G+ v+++ +rG g   ++     +++lg n   D  +a+++l ++ +++s++++++G S GG +++ ++ ++ +l +a+v e+ ++    +  +
    EPX72294.1 229 SALGMNVFIISYRGYG---RSTGS--SNELGMN--IDAQTALDFLQQHPICSSTNIVVYGQSVGGAVALSLASKNESLISALVLENTFTSIKDMIPT 318
                   5678888888888744...44443..4444544..3888999***9999****************************************99888877 PP

                   TTSTHHHCCCC--TTTCHHHHHHHHHH-CGGG-----EEEEEEETT-SSS-THHHHHHHHHHH--S-SEEEEEETTS-S CS
  Peptidase_S9 108 tdllteeymewgnpeeneegykelspyspldnvkaypplLlihGlaDdrvppaealklvaaLqkkgknvlllifpdegH 186
                        + y +   +    e+ + + ++++l+n     p+L++ G +D+ vpp +   l+  + +k+k  +l ifp+++H
    EPX72294.1 319 ---VFP-YIGSLLSHFCTEKWESVRAIRKLHN----LPVLFLSGAEDEIVPPPQMQLLYGLCPSKQK--RLCIFPKSKH 387
                   ...333.4554444445677888999999999....99****************9999999988666..7999999999 PP

>> AXE1  Acetyl xylan esterase (AXE1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.0   0.00081       1.2      70     122 ..     191     248 ..     173     256 .. 0.78
   2 !   13.1   0.1   1.9e-05     0.028     156     196 ..     257     297 ..     254     311 .. 0.87
   3 ?    3.4   0.0     0.017        25     256     301 ..     343     389 ..     332     405 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.00081
                 EEEEEEES.SSSSEEEEEEEE-TT--..GGGHHHHHHHHHTT-EEEEEE-TTTS.... CS
        AXE1  70 kaklvlPkekeeklPavvefhGYegs..rgeihdllnyaaaGyavvvmdvRGqg...g 122
                  + l+l +++ e  P+++ fh   g+  +  +   ++y+a G+ v+ +  RG g   g
  EPX72294.1 191 DSYLMLQSKAPESCPTLLYFHANAGNmgHRLPIARVFYSALGMNVFIISYRGYGrstG 248
                 5567777778899********99887335567899*****************993322 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 1.9e-05
                 HHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHH-S CS
        AXE1 156 lDavrlveivaslpevDeeRvavlGasqGGalalavaalek 196
                 +Da  +++ ++++p    + ++v+G+s GGa+al  a+ ++
  EPX72294.1 257 IDAQTALDFLQQHPICSSTNIVVYGQSVGGAVALSLASKNE 297
                 7999******************************9998665 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.017
                 CC--S-EEEEEETT-SSS-HHHHHHHHHH--SS.EEEEEETT-STTT CS
        AXE1 256 krvkaevllsvgLeDevcpPstvfaaynklete.keikvyeefahea 301
                 k  + +vl+  g eDe+ pP  +  +y    ++ k + ++++ +h++
  EPX72294.1 343 KLHNLPVLFLSGAEDEIVPPPQMQLLYGLCPSKqKRLCIFPKSKHND 389
                 566889**************999999999877669999999999986 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   6.5e-07   0.00097      24      95 ..     230     308 ..     208     375 .. 0.67

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 6.5e-07
                    CCTCEEEEE--TTSTS-GGCS--HHHCHHHHHHHCCTT......TTSEEEEEETCHHHHHHHHHHCC.......EE.EEES- CS
  Abhydrolase_6  24 aagvhvlapDlpGhGrsdpppldledladlaalldelaa....gggpvvlvGHSlGGalalaaapla.....lvvg.vlldp 95 
                    a g  v++++++G+Grs+++  +l    d   +ld l +    +  ++v+ G S GGa+al    la     l+++ vl ++
     EPX72294.1 230 ALGMNVFIISYRGYGRSTGSSNELGMNIDAQTALDFLQQhpicSSTNIVVYGQSVGGAVALS---LAsknesLISAlVLENT 308
                    33556699*********9999888776666666666666666999999**************...66444554444333333 PP

>> DLH  Dienelactone hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   8.9e-06     0.013      81     185 ..     258     385 ..     245     391 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 8.9e-06
         DLH  81 dlkaavaylksvpevstkkvgvvGfCmGGalalllaaevpevdaavafYG.........................lspekeleeaakikapilalfgee 154
                 d++ a+++l++ p  s+ +++v G  +GGa+al la++++ +  a++                             + e+  +  +  + p+l+l g e
  EPX72294.1 258 DAQTALDFLQQHPICSSTNIVVYGQSVGGAVALSLASKNESLISALVLENtftsikdmiptvfpyigsllshfctEKWESVRAIRKLHNLPVLFLSGAE 356
                 66789********99************************666555554444778999999999999999998875455555555555678999999999 PP

         DLH 155 DefipadevekleealkaanvdlelkvYpga 185
                 De++p  +++ l   +  +++  +l ++p  
  EPX72294.1 357 DEIVPPPQMQLLYGLCPSKQK--RLCIFPKS 385
                 999999998888777754444..44555555 PP

>> DUF818  Chlamydia CHLPS protein (DUF818)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   2.5e-06    0.0038     168     290 ..     229     345 ..     185     359 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 2.5e-06
      DUF818 168 kllganilvfnYPGvmsskGeitrenlakayqaCvrYLrDkeqGPkakeiiayGYsLGtlvqaeaLskevvdgsdgvsWivvkDRgprslaavakqflk 266
                  +lg n+ +  Y G  +s+G+++   +    q    +L+ ++    + +i+ yG s+G+ v     sk+            v + +  s+ ++   ++ 
  EPX72294.1 229 SALGMNVFIISYRGYGRSTGSSNELGMNIDAQTALDFLQQHPICS-STNIVVYGQSVGGAVALSLASKNES-----LISALVLENTFTSIKDMIPTVFP 321
                 56789***********************9************9875.567**********985333333332.....22234444555566666666666 PP

      DUF818 267 kigkliaklvgWeidsekrsedLk 290
                  ig+l+ + +  + +s++  ++L+
  EPX72294.1 322 YIGSLLSHFCTEKWESVRAIRKLH 345
                 666666666666666666666665 PP

>> FSH1  Serine hydrolase (FSH1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   1.1e-05     0.017      84     194 ..     257     380 ..     238     387 .. 0.70

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.1e-05
        FSH1  84 egleesldavkdyikengpfdGiiGFSqGaalaallaslleellkea...........shpsl..kfailvsGfkleepkyeeyyeedkiqtptLhvlG 169
                 ++ + +ld+++++  ++     + G S G+a+a  las+ e l                 p +   +  l+s f  e+ +  ++   +  ++p+L++ G
  EPX72294.1 257 IDAQTALDFLQQHPICSSTNIVVYGQSVGGAVALSLASKNESLISALvlentftsikdMIPTVfpYIGSLLSHFCTEKWESVRAI-RKLHNLPVLFLSG 354
                 56677888888888888888899999***********999998865488886665432111112222223333333333222333.44459******** PP

        FSH1 170 elDtvvdeerseaLaeafkns.skvl 194
                  +D++v++ +++ L+  + ++ +++ 
  EPX72294.1 355 AEDEIVPPPQMQLLYGLCPSKqKRLC 380
                 ******************99855555 PP

>> Peptidase_S15  X-Pro dipeptidyl-peptidase (S15 family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0    0.0002      0.29      53     140 ..     228     314 ..     177     347 .. 0.81
   2 ?   -2.5   0.0         2     3e+03     215     248 ..     335     366 ..     328     384 .. 0.66

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.0002
                    HHHTT-EEEEEE-TTSTTS-S---TTTTTHHHHHHHHHHHHHHCTTE.EEEEEEEEECHHHHHHHHHCTT--TTEEEEEEECE-S-TCC CS
  Peptidase_S15  53 fvarGYavVvqdvrGtggSeGeftvgdsdeaedgadvidWlakqpws.nGkVgmtGiSYlGttqllaaatgvpalkaivpeaaisdlyd 140
                    + a G  v + + rG g S+G  +        d+  ++d l+++p + + ++ ++G S +G ++l +a+++   + a+v e + ++  d
     EPX72294.1 228 YSALGMNVFIISYRGYGRSTGSSNE--LGMNIDAQTALDFLQQHPICsSTNIVVYGQSVGGAVALSLASKNESLISALVLENTFTSIKD 314
                    6667778888999********9988..77789999*********6651679******************99999999998887666655 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 2
                    HHTT-HHHHHCT--S-EEEEEECCSSTTCCHHHH CS
  Peptidase_S15 215 WkdrnlsedadkvkapvllvgGwnDwnvkngaik 248
                    W++ ++ ++    + pvl+++G  D++v    ++
     EPX72294.1 335 WESVRAIRK--LHNLPVLFLSGAEDEIVPPPQMQ 366
                    666666653..345799999**999888744444 PP

>> Esterase  Putative esterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00017      0.25     103     137 ..     263     297 ..     259     362 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00017
                 HHHHHHHCSEECCCEEEEEETHHHHHHHHHHHCST CS
    Esterase 103 lplldanfrtapdgravaGqSmGGlgALilalkhp 137
                 l++l+++   +++  +v GqS GG +AL la+k+ 
  EPX72294.1 263 LDFLQQHPICSSTNIVVYGQSVGGAVALSLASKNE 297
                 5666666667777799***************9985 PP

>> Abhydrolase_5  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00033       0.5      46      90 ..     262     309 ..     252     332 .. 0.76
   2 ?   -3.4   0.0       4.8   7.1e+03      99     118 ..     345     364 ..     342     367 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00033
  Abhydrolase_5  46 aeeiikeap..klekfvvgGhslGGvvasrfaaeee.kiegvvflasY 90 
                    a + ++++p  +  + vv G s+GG+va  +a+++e  i ++v+  ++
     EPX72294.1 262 ALDFLQQHPicSSTNIVVYGQSVGGAVALSLASKNEsLISALVLENTF 309
                    5666667762234689*****************997477777765555 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 4.8
  Abhydrolase_5  99 lskkvlsivgteDgvlnvks 118
                    ++ +vl + g eD++++  +
     EPX72294.1 345 HNLPVLFLSGAEDEIVPPPQ 364
                    578999999****9998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (414 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       860  (0.047967); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.57u 0.29s 00:00:00.85 Elapsed: 00:00:00.42
# Mc/sec: 2955.09
//
Query:       EPX72295.1  [L=375]
Description: NEDD8 protease Nep2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-32  113.5   0.1    2.5e-32  112.5   0.1    1.5  1  Peptidase_C48  Ulp1 protease family, C-terminal catalytic dom


Domain annotation for each model (and alignments):
>> Peptidase_C48  Ulp1 protease family, C-terminal catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.5   0.1   1.4e-36   2.5e-32       1     208 [.      96     279 ..      96     283 .. 0.93

  Alignments for each domain:
  == domain 1  score: 112.5 bits;  conditional E-value: 1.4e-36
                    ---BHHHHHHHHHHHHHHHHH..CCCTCCCEEE--THHHHHHC..........SS.......TCHCHHHCTTCCCCC.S..-GGG-SEEEEEEEC. CS
  Peptidase_C48   1 ewlndtvidfylkllaerles..seskaervhflntffvskLtkavkdfkknkskkkfkeskkkdlyngvrrwtrkv.nkedlfdkdiiyiPined 93 
                    +w+ dt+idfy+++l +++    s++++ ++++l++ +v++L                         +++  ++  +  ++ +f++++i++Pin +
     EPX72295.1  96 YWILDTNIDFYYEILVRQVLLkqSPENRGQIYLLRPAMVFFLA------------------------QAPDPADIVSaLPPAMFNAKFIFLPINDT 167
                    7****************999889********************........................344444444446889************99 PP

                    .......TTEEEEEEEETCCCEEEEE-TTS-SSH.HHHHHHHHHHHHHHHHHCCCCCSTT-.GGGEEEEEEE-----SSCCCHHHHHHHHHHHHHC CS
  Peptidase_C48  94 .......gkHWvlliinlpdktililDSlislhtvkkenrpinnlkpyLleealkkkqkqldltpfeierltkvpqqknsgDCGiyvlkfiellae 182
                           g+HW+ll+i+++++  +++DS+++++t +++n +++nl +   +e+              ++r++k+pqq n +DCG++v++++++l++
     EPX72295.1 168 necgiesGSHWSLLVISVEKGLGWYYDSMSNGNT-NDCNLALKNLGILFNREF--------------RIRHMKTPQQINHCDCGLHVCENTRILMY 248
                    9*********************************.*****************8..............99*************************** PP

                    THHCHHHHH.....SS.HHHHHHHHHHHTTH CS
  Peptidase_C48 183 gapqessvt.....ltekdvdsfrkklaldi 208
                    +  q+ + +     ++++ vds r ++++++
     EPX72295.1 249 RLLQKPYIPrvdmsIENTRVDSHRIRKNMMQ 279
                    ******999******************9885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (375 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       555  (0.0309554); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.36
# Mc/sec: 3158.31
//
Query:       EPX72296.1  [L=188]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.1e-36  124.2   0.9    8.2e-36  124.0   0.9    1.0  1  Vfa1             AAA-ATPase Vps4-associated protein 1
  ------ inclusion threshold ------
      0.049   13.6   0.2      0.069   13.1   0.2    1.2  1  Trypan_PARP      Procyclic acidic repetitive protein (PARP)
       0.12   11.4   2.7       0.14   11.2   2.7    1.0  1  SLC12            Solute carrier family 12
       0.36    8.9   4.9       0.38    8.8   4.9    1.1  1  Hid1             High-temperature-induced dauer-formation pro
       0.36    9.0   8.4       0.44    8.8   8.4    1.0  1  RAP1             Rhoptry-associated protein 1 (RAP-1)
       0.92    9.5   7.7       0.13   12.2   3.6    1.6  2  ICAP-1_inte_bdg  Beta-1 integrin binding protein
        1.1    9.7   8.5        1.6    9.1   8.2    1.4  1  TYA              TYA transposon protein
        1.8    7.7   3.9        2.1    7.5   3.9    1.1  1  Zip              ZIP Zinc transporter
        2.3    6.9   6.7        2.8    6.6   6.7    1.1  1  Presenilin       Presenilin
        2.4    6.6   7.8        2.8    6.4   7.8    1.1  1  Macoilin         Macoilin family


Domain annotation for each model (and alignments):
>> Vfa1  AAA-ATPase Vps4-associated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.0   0.9   4.6e-39   8.2e-36       1     180 [.       3     183 ..       3     184 .. 0.71

  Alignments for each domain:
  == domain 1  score: 124.0 bits;  conditional E-value: 4.6e-39
        Vfa1   1 NlYtlRkVaekdakaCliCykpttsVLitednkkDffYvCesHLkDkqFatpivdeeeeeaakkkkeleeeiekvkkeyeekqkkkkekekkkkekdkk 99 
                 N+Y+lR+V+e+d k+C+iCyk t+ VLit+++  DffY+C  HL D++Fat  +d + ++   +++ + e+ ++ kk+ ++++ +++++ +  +++dk+
  EPX72296.1   3 NNYILRQVSESDRKPCFICYKLTKWVLITKSK-FDFFYTCFNHLGDRGFATLTYDPHDKS--VSRRTTGESSASAKKDHDSNEVSSTDDPTI-DQTDKS 97 
                 99******************************.6**********************5555..566666666677777777776666643333.223322 PP

        Vfa1 100 dkdkkkekekdkkkekek.....eeekkkelkkaeeelee.....keeprvkkykLhkefyqsRlerkrqaeaakeneerlqdpeefPsvP 180
                 ++++++++e++++++ ++     +++++ +  ++     +     ++  + ++y Lh++++++Rl+ +++  a+++++  l++ + +Ps P
  EPX72296.1  98 QEKEHESSESNSNSNMSTkeqviDSKETGSSPST-----SssvspDTVMSGRHYMLHRDIFEMRLQFHKNLAAQRKTRLLLNSGKGLPSPP 183
                 2222222222222222221234322233333333.....24444467777788******************************9*****99 PP

>> Trypan_PARP  Procyclic acidic repetitive protein (PARP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.2   3.8e-05     0.069      19      91 ..      45     118 ..      37     142 .. 0.56

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 3.8e-05
  Trypan_PARP  19 fagvgfaaaaegpedkgltkggkgkekgtkvsdddtngtdpepep.epepepepepepepepetepeeepepep 91 
                  +   gfa+ + +p+dk++ +   g++  +  +d d+n + +  +p  ++ +   e e e  + ++  + + +e 
   EPX72296.1  45 LGDRGFATLTYDPHDKSVSRRTTGESSASAKKDHDSNEVSSTDDPtIDQTDKSQEKEHESSESNSNSNMSTKEQ 118
                  55679*******************97777777778887643333303334444455544433222222222222 PP

>> SLC12  Solute carrier family 12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   2.7   7.5e-05      0.14     101     212 ..      27     141 ..      21     170 .. 0.44

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 7.5e-05
       SLC12 101 YfnvihdafdlklavaiLrlkegldvsellqeeeeeeeekekkeaeese.keeeekkkakkkklleekskekeekekleekdsnlslseekk..eeeke 196
                 ++ + +++fd+ +        +g+ + ++  ++++ +++++ +++++++ ++++++ +++++ ++ +++k++e++++ +e++sn+++s++++  +++++
  EPX72296.1  27 WVLITKSKFDFFYTCFNHLGDRGFATLTYDPHDKSVSRRTTGESSASAKkDHDSNEVSSTDDPTIDQTDKSQEKEHESSESNSNSNMSTKEQviDSKET 125
                 555555666666665555556666555443333333222222222222223334444444444445666666666666666666666555552222222 PP

       SLC12 197 kkkekkkkkekkeklk 212
                  ++++++++ + ++ +
  EPX72296.1 126 GSSPSTSSSVSPDTVM 141
                 2223333333333333 PP

>> Hid1  High-temperature-induced dauer-formation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   4.9   0.00021      0.38     601     677 ..      60     136 ..      33     171 .. 0.61

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00021
        Hid1 601 enssessrieesrsesrspslsevpelksslaitddeskaereksatessssqavsqlremsekarakesaestees 677
                 ++ s++++ e+s s ++   ++ev+++++    + d+s++++++s++++s+s++ ++++ +++k+++ ++ +s++ s
  EPX72296.1  60 KSVSRRTTGESSASAKKDHDSNEVSSTDDPTIDQTDKSQEKEHESSESNSNSNMSTKEQVIDSKETGSSPSTSSSVS 136
                 33333333344444444444555555555555555555555555555555555555555555555555555444433 PP

>> RAP1  Rhoptry-associated protein 1 (RAP-1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   8.4   0.00025      0.44      45     164 ..      24     146 ..       8     150 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00025
        RAP1  45 inswtrlddke..flnsyedkvsdesfleskaskedGninltdtsesndaskkGsGksrvrsasaaaileeddskdd.lefkasqsvvktskpkstste 140
                 +  w+ + + +  f+ +  +++ d  f       +d +++   t es+ ++kk +  + v s+   +i + d s++   e   s+s+   s+ +    +
  EPX72296.1  24 LTKWVLITKSKfdFFYTCFNHLGDRGFATLTYDPHDKSVSRRTTGESSASAKKDHDSNEVSSTDDPTIDQTDKSQEKeHESSESNSNSNMSTKEQVIDS 122
                 567888877651156666689999999999988889999999***************9**999999999888887641444455555577888888888 PP

        RAP1 141 slksssdskskasaksnvksasky 164
                     ss+s s++ ++  v s+ +y
  EPX72296.1 123 KETGSSPSTSSSVSPDTVMSGRHY 146
                 88999***********99999876 PP

>> ICAP-1_inte_bdg  Beta-1 integrin binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1       1.3   2.3e+03      35      51 ..      69      85 ..      58      98 .. 0.55
   2 ?   12.2   3.6   7.3e-05      0.13       6      67 ..      99     159 ..      94     184 .. 0.64

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 1.3
  ICAP-1_inte_bdg 35 rsstvasldtdstkssg 51
                      ss+ a  d ds   s 
       EPX72296.1 69 ESSASAKKDHDSNEVSS 85
                     34455555555555444 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 7.3e-05
  ICAP-1_inte_bdg   6 kkrhsssssqs.seistksksvdsslgglsrsstvasldtdstkssgqsnavsdasaefrvky 67 
                       k h ss s+s s++stk + +ds   g s  st +s+  d+   sg+         e+r+++
       EPX72296.1  99 EKEHESSESNSnSNMSTKEQVIDSKETGSS-PSTSSSVSPDTVM-SGRHYMLHRDIFEMRLQF 159
                      56676665554399***********99976.5677888777554.565666666666777655 PP

>> TYA  TYA transposon protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   8.2   0.00091       1.6       6      76 ..      79     149 ..      70     155 .. 0.91

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00091
         TYA   6 tskevqtnqdpldvsaskleefdkastkansqqettpassavpenhhhaspqaaqvpspqnGpyqqqrmmt 76 
                  s ev ++ dp    + k +e +++s++ ns+ + +     +   +   sp ++++ sp      ++ m+ 
  EPX72296.1  79 DSNEVSSTDDPTIDQTDKSQEKEHESSESNSNSNMSTKEQVIDSKETGSSPSTSSSVSPDTVMSGRHYMLH 149
                 589********9999********************************************988877777765 PP

>> Zip  ZIP Zinc transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   3.9    0.0011       2.1     106     171 ..      57     117 ..      32     158 .. 0.55

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0011
         Zip 106 hkektpkkasssssesaakksvsndkveeseekedhvaeadtdadskeelrngkqeksesekeqas 171
                  ++k+ +  ++ +s ++akk +++++v+++ +        d +++s+e++++++++ s s+ ++++
  EPX72296.1  57 PHDKSVSRRTTGESSASAKKDHDSNEVSSTDDP-----TIDQTDKSQEKEHESSESNSNSNMSTKE 117
                 344444444444444444444444444444444.....3344444444444444333333333322 PP

>> Presenilin  Presenilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   6.7    0.0016       2.8     223     285 ..      62     124 ..      46     156 .. 0.35

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0016
  Presenilin 223 laaeekkaevaeseeeeeaekkkeeasesskeeeseeesseksaqsseseeeseeesseaess 285
                  +++++ ++ a++++++++++ +++++ + +++++++e++++s++s+++++ s++e+  ++++
  EPX72296.1  62 VSRRTTGESSASAKKDHDSNEVSSTDDPTIDQTDKSQEKEHESSESNSNSNMSTKEQVIDSKE 124
                 222222111122222222222222222221111111111111111111111111111111111 PP

>> Macoilin  Macoilin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   7.8    0.0016       2.8     302     365 ..      69     134 ..      44     174 .. 0.41

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0016
    Macoilin 302 essgsesellveesvkskssssssssnknskkasag..sagssnssskkhsessksvtssssskns 365
                 ess+s+++ + +++v+s+  ++  ++ k+++k++ +  s + sn s+k++   sk++ ss s+++s
  EPX72296.1  69 ESSASAKKDHDSNEVSSTDDPTIDQTDKSQEKEHESseSNSNSNMSTKEQVIDSKETGSSPSTSSS 134
                 122222222222233333333333332222222221001122222222222222222222222211 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (188 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1759  (0.0981092); expected 358.6 (0.02)
Passed bias filter:                      705  (0.0393218); expected 358.6 (0.02)
Passed Vit filter:                       114  (0.00635841); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 1396.21
//
Query:       EPX72297.1  [L=414]
Description: kinetochore protein Mis15 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.1e-67  226.2   0.1    2.1e-66  224.9   0.1    1.5  1  CENP-N    Kinetochore protein CHL4 like
     0.0026   17.8   0.0       0.15   12.1   0.0    2.5  2  DUF325    Viral proteins of unknown function


Domain annotation for each model (and alignments):
>> CENP-N  Kinetochore protein CHL4 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  224.9   0.1   2.4e-70   2.1e-66       7     415 .]      19     399 ..      15     399 .. 0.86

  Alignments for each domain:
  == domain 1  score: 224.9 bits;  conditional E-value: 2.4e-70
      CENP-N   7 lrkiLnrlsrssLlsLvlkWldkrnlqlaaPeddeeddeaedkylpertleslqelytelqerkgsKrevidrilegdWrhglnlyqlAqlDiqylvdh 105
                 ++ +Lnrl+++ L++ +l W++++     +P   ++  +  d+ lp +  + lq +++    +   Kr ++ r++  dWr+g++l q+A+l++  + + 
  EPX72297.1  19 IQTLLNRLPKEFLIKNCLHWIQSHTY---PP---NATADGVDDELPMEDWNPLQFYLDP--PKSMLKRAIAYRMINLDWRNGFSLGQIAHLELAAIAEG 109
                 6889******************9844...44...2234445555666667778875554..34899********************************* PP

      CENP-N 106 pnslkWtasklkksdgseviprldpstFlsnLqeelsplvkahyylfrhetlpliilRiqlfdspystpsqapetaldsskpvYvafpdnspyifiSka 204
                   s +Wtask+ ++++       +ps  l  L+ el+ l+ +h+y+ +h+tlp+ ++Riql++s+  ++++     ++s++++Y+ + +ns++++    
  EPX72297.1 110 IFSFRWTASKVFHQHE--RSLFSNPSLVLHMLKLELQALFIYHTYMLQHPTLPIWLMRIQLHESSKPSSLH---LLPSSRRVLYLGIVKNSDVVL---- 199
                 ***************9..333459***********************************************...9********************.... PP

      CENP-N 205 hstatdakslqklvlqaipkalsrprkriaLketslptrsLeallalrGpsrynaagGawsiyadasveksPldprkkhpilsekeedegdkeekksar 303
                 h++  +++++++l+lq++++++ r++    L++ +++ +sLe+l +++G  r+ +a+Gaw+iy ++++++sPld r+++ +++                
  EPX72297.1 200 HNIFLKNDVCHRLFLQCLTRVVDRLQTASFLQPLEITGKSLESLYQILGSHRKTNALGAWQIYGNNEIDSSPLDLRPTNLAAK---------------- 282
                 *****************************************************************************887752................ PP

      CENP-N 304 grkekerlteeskstkerkkr.rklvaqerfgekdslaplerveyrLedefeeedgdeeeed............reepkiklklsGsdvfaGLreLaea 389
                         ++++  +k+  ++ rk ++q+rfg+  s + l+rv + L++++  +d++e +++              +p ++l+++G++vf G++eL+e+
  EPX72297.1 283 ------YFYPKQLVSKTLSETdRKIATQNRFGDL-SNQALDRVIISLNHDY-LDDEEEGLRNasvrgkplstsdVHRPVLTLQFRGQHVFQGIKELCEE 373
                 ......222222222222222336789*****99.****************.4444444444334444444443599********************** PP

      CENP-N 390 givDaekmPgwltGeegvssgkvrdg 415
                 g  D+ +mP++ltGe g s+  v dg
  EPX72297.1 374 GAMDPITMPSYLTGESGKSMLYVYDG 399
                 **********************9997 PP

>> DUF325  Viral proteins of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   0.0   1.6e-05      0.15      41      68 ..      23      51 ..       9      55 .. 0.83
   2 ?    2.9   0.0     0.013   1.1e+02      26      50 ..     185     209 ..     169     219 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 1.6e-05
      DUF325 41 fnrtsrndlisacmq.invhtympnatid 68
                +nr  ++ li  c+  i+ hty pnat d
  EPX72297.1 23 LNRLPKEFLIKNCLHwIQSHTYPPNATAD 51
                69999********9669**********98 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.013
      DUF325  26 rdlidgmiknedvqrfnrtsrndli 50 
                 r l  g++kn dv   n   +nd+ 
  EPX72297.1 185 RVLYLGIVKNSDVVLHNIFLKNDVC 209
                 66778************99999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (414 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       408  (0.0227564); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 2956.39
//
Query:       EPX72298.1  [L=146]
Description: 40S ribosomal protein S10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.8e-44  147.7   0.1    9.3e-44  147.4   0.1    1.1  1  S10_plectin  Plectin/S10 domain
  ------ inclusion threshold ------
      0.063   13.8   0.0       0.16   12.5   0.0    1.6  1  RlmM_FDX     RlmM ferredoxin-like domain


Domain annotation for each model (and alignments):
>> S10_plectin  Plectin/S10 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.4   0.1     1e-47   9.3e-44       1      92 [.       3      94 ..       3      95 .. 0.99

  Alignments for each domain:
  == domain 1  score: 147.4 bits;  conditional E-value: 1e-47
                 --HCHHHHHHHHCCCCSCEEEE--SS----SSS---HHHHHHHHHHCCCCTSEEEEEETTEEEEEE-HHHHHHHHHHHXXXXSXHHHHHXXX CS
  S10_plectin  1 ipkknrkaiyeylfkegvlvakkdfelkkheelnvpnlqvikalqSLksrgyvkeqfaWrhyYytLtneGieylreylhlpeeivPatlkks 92
                 ipk+nrkai+++lf++gvlvakkdf+l+kh+e++vpnlqvika+qSL srgy+k++++W ++YytL+neG+eylreylhlp+e+vPat+k++
   EPX72298.1  3 IPKENRKAIHQTLFQQGVLVAKKDFNLPKHPEVGVPNLQVIKACQSLDSRGYIKTRYNWGYFYYTLNNEGVEYLREYLHLPAEVVPATHKRQ 94
                 89***************************************************************************************986 PP

>> RlmM_FDX  RlmM ferredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.8e-05      0.16      23      61 ..      45      82 ..      41      89 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.8e-05
    RlmM_FDX 23 kaaelevaGyvkakknsgyvlfeleeaeaaeellkkldl 61
                 +++l+  Gy+k++ n gy  ++l ++e +e l + l+l
  EPX72298.1 45 ACQSLDSRGYIKTRYNWGYFYYTL-NNEGVEYLREYLHL 82
                56788899****************.78999999888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       364  (0.0203023); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.23s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 1152.44
//
Query:       EPX72299.1  [L=479]
Description: WD repeat protein Prp5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.7e-43  143.5  14.8    1.2e-08   35.5   0.7    7.4  7  WD40         WD domain, G-beta repeat
    0.00025   21.3   0.6       0.72   10.2   0.1    4.4  5  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
  ------ inclusion threshold ------
       0.02   13.6   4.2         10    4.6   0.1    3.8  4  Nup160       Nucleoporin Nup120/160
       0.12   12.2   0.0         24    4.8   0.0    2.5  2  DUF1652      Protein of unknown function (DUF1652)


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.5   0.7   2.6e-12   1.2e-08       1      38 []     159     197 ..     159     197 .. 0.94
   2 !   27.8   0.0   6.8e-10   3.1e-06       4      38 .]     204     239 ..     201     239 .. 0.93
   3 !   21.9   0.1   5.1e-08   0.00023       2      38 .]     244     281 ..     243     281 .. 0.95
   4 !   26.6   0.1   1.7e-09   7.6e-06       1      38 []     285     323 ..     285     323 .. 0.90
   5 !   12.0   0.0   6.8e-05       0.3       1      37 [.     327     363 ..     327     364 .. 0.89
   6 !   19.0   0.0   4.2e-07    0.0019       4      38 .]     371     405 ..     368     405 .. 0.89
   7 ?    5.0   0.0     0.011        50      18      37 ..     435     454 ..     408     455 .. 0.76

  Alignments for each domain:
  == domain 1  score: 35.5 bits;  conditional E-value: 2.6e-12
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++++r+++GH ++v+++++ p + w+++G  D+t++iWd
  EPX72299.1 159 WKLMRVISGHlGWVRCVDVEPGNEWFCTGAGDRTIKIWD 197
                 67899************************55*******9 PP

  == domain 2  score: 27.8 bits;  conditional E-value: 6.8e-10
                 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                   tltGH  +v++la+sp +++l+s+++D+ v+ Wd
  EPX72299.1 204 KLTLTGHiAGVRGLAVSPRHPYLFSCGEDKMVKCWD 239
                 5689*******************************9 PP

  == domain 3  score: 21.9 bits;  conditional E-value: 5.1e-08
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 + +r++ GH s+v++l+ +p  + l+++++D   r+Wd
  EPX72299.1 244 KVIRHYHGHlSGVYALSLHPTLDVLITAGRDAVARVWD 281
                 5689*********************************9 PP

  == domain 4  score: 26.6 bits;  conditional E-value: 1.7e-09
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +q++++l GH s v+sl  +   + +++Gs+D tvr+Wd
  EPX72299.1 285 RQNVHVLAGHkSTVSSLVSQEFDPQVVTGSMDSTVRLWD 323
                 589*******666**999888888899***********9 PP

  == domain 5  score: 12.0 bits;  conditional E-value: 6.8e-05
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 g++++tlt H + v++la +p    +asGs   +++ W
  EPX72299.1 327 GKTMTTLTHHkKTVRALALHPQEFTFASGS-SDNIKHW 363
                 578999**99888*****************.8888888 PP

  == domain 6  score: 19.0 bits;  conditional E-value: 4.2e-07
                 EEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 
                 ++ ++GH+  v+ l+ +pd++++ sG d+g+  +Wd
  EPX72299.1 371 MGNFEGHNAiVNTLSINPDNTMF-SGADNGSMCFWD 405
                 6789***7757***********7.7*99*******9 PP

  == domain 7  score: 5.0 bits;  conditional E-value: 0.011
                 EETTSSEEEEEETTSEEEEE CS
        WD40  18 fspdgawlasGsdDgtvriW 37 
                 f++ g  l+++  D++++i+
  EPX72299.1 435 FDKTGLRLITCEADKSIKIY 454
                 7888888999*77******8 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0       0.1   4.6e+02      38      72 ..     169     203 ..     149     210 .. 0.79
   2 ?    4.1   0.0     0.013        58      38      78 ..     211     251 ..     194     262 .. 0.84
   3 !   10.2   0.1   0.00016      0.72      23      87 ..     273     343 ..     259     348 .. 0.80
   4 ?    3.0   0.0     0.027   1.2e+02      34      61 ..     333     360 ..     320     385 .. 0.82
   5 ?   -0.2   0.0      0.28   1.3e+03      37      79 ..     377     418 ..     361     461 .. 0.75

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.1
  ANAPC4_WD40  38 dsevrsLaWkpdgklLavaysdgevrlldaesgkv 72 
                   + vr++  +p ++ ++ +  d ++++ d  sg++
   EPX72299.1 169 LGWVRCVDVEPGNEWFCTGAGDRTIKIWDLASGTL 203
                  4568889999999999*************999986 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.013
  ANAPC4_WD40  38 dsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsv 78 
                     vr+La +p    L    +d  v+  d e+ kv+++++ 
   EPX72299.1 211 IAGVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHG 251
                  567999*******************************9875 PP

  == domain 3  score: 10.2 bits;  conditional E-value: 0.00016
  ANAPC4_WD40  23 Rlngqrvwtl.......eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtcl 87 
                  R    rvw++         ++++s+v+sL  ++ +   + +  d++vrl d   gk++ +l+ +++ +v  l
   EPX72299.1 273 RDAVARVWDMrtrqnvhVLAGHKSTVSSLVSQEFDPQVVTGSMDSTVRLWDLAAGKTMTTLTHHKK-TVRAL 343
                  44555666666555555447899**************************************99988.47665 PP

  == domain 4  score: 3.0 bits;  conditional E-value: 0.027
  ANAPC4_WD40  34 edkedsevrsLaWkpdgklLavaysdge 61 
                   ++++++vr+La +p++  +a + sd+ 
   EPX72299.1 333 LTHHKKTVRALALHPQEFTFASGSSDNI 360
                  4678999****************99984 PP

  == domain 5  score: -0.2 bits;  conditional E-value: 0.28
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvk 79 
                  ++  v+ L+ +pd+++   + ++g++ + d +sg+  ++l+++
   EPX72299.1 377 HNAIVNTLSINPDNTM-FSGADNGSMCFWDWKSGHKYQELQAT 418
                  5566777777777654.46777888888888888777666654 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0     0.067     3e+02     228     252 ..     177     203 ..     171     217 .. 0.76
   2 ?    4.1   0.0    0.0032        15     232     255 ..     225     248 ..     217     255 .. 0.88
   3 ?    2.9   0.1    0.0078        35     231     253 ..     266     288 ..     258     292 .. 0.88
   4 ?    4.6   0.1    0.0023        10     229     259 ..     306     336 ..     294     409 .. 0.79

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.067
                 ...TTTEEEEEETT-EEEEEETTTTEE CS
      Nup160 228 i..gqtylfalsrdgkLrvWnlltgkc 252
                 +  g+   ++   d+++++W+l++g++
  EPX72299.1 177 VepGNEWFCTGAGDRTIKIWDLASGTL 203
                 55566666777789********98765 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.0032
                 EEEEEETT-EEEEEETTTTEEEEE CS
      Nup160 232 ylfalsrdgkLrvWnlltgkclat 255
                 ylf+   d+ ++ W+l+t+k++++
  EPX72299.1 225 YLFSCGEDKMVKCWDLETNKVIRH 248
                 8999999*************9986 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.0078
                 TEEEEEETT-EEEEEETTTTEEE CS
      Nup160 231 tylfalsrdgkLrvWnlltgkcl 253
                 ++l ++ rd + rvW+ +t + +
  EPX72299.1 266 DVLITAGRDAVARVWDMRTRQNV 288
                 689999*************9976 PP

  == domain 4  score: 4.6 bits;  conditional E-value: 0.0023
                 TTTEEEEEETT-EEEEEETTTTEEEEEEE-- CS
      Nup160 229 gqtylfalsrdgkLrvWnlltgkclatidll 259
                  +  +++ s d ++r+W+l+ gk++ t +  
  EPX72299.1 306 FDPQVVTGSMDSTVRLWDLAAGKTMTTLTHH 336
                 5556788899*************99985554 PP

>> DUF1652  Protein of unknown function (DUF1652)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0    0.0053        24      27      44 ..     192     209 ..     184     212 .. 0.90
   2 ?    4.6   0.0    0.0065        29       5      39 ..     300     330 ..     297     335 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0053
     DUF1652  27 tvrlfdpasgevdLlvtG 44 
                 t+++ d asg ++L++tG
  EPX72299.1 192 TIKIWDLASGTLKLTLTG 209
                 9****************9 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.0065
     DUF1652   5 qiveqaFlPlrcecsldadgsmtvrlfdpasgevd 39 
                 ++v q F P +++ s+d+    tvrl d a g++ 
  EPX72299.1 300 SLVSQEFDPQVVTGSMDS----TVRLWDLAAGKTM 330
                 6899************76....8999999988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (479 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       428  (0.0238719); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.26s 00:00:00.86 Elapsed: 00:00:00.46
# Mc/sec: 3139.29
//
Query:       EPX72300.1  [L=230]
Description: nicotinamide riboside kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      3e-05   24.6   0.1     0.0002   21.9   0.1    2.0  1  AAA_18    AAA domain
     0.0012   18.6   1.1     0.0071   16.1   0.4    2.3  2  PRK       Phosphoribulokinase / Uridine kinase family
  ------ inclusion threshold ------
      0.028   14.7   0.0      0.063   13.5   0.0    1.5  2  AAA_28    AAA domain
       0.14   12.3   0.0       0.23   11.6   0.0    1.6  1  AAA_33    AAA domain


Domain annotation for each model (and alignments):
>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.1   4.5e-08    0.0002       1     114 [.       8     158 ..       8     164 .. 0.60

  Alignments for each domain:
  == domain 1  score: 21.9 bits;  conditional E-value: 4.5e-08
      AAA_18   1 IlltGtpGvGKttlakeLskrl.gfgvnlrdvakenglllevdpe..aldeskrldedkldklldaleenss........................... 69 
                 ++++G++++GK+tl++ L     g+++ + d +++ +  ++v +   ++d ++ l+ d   + l+ ++++ +                           
  EPX72300.1   8 VGVSGASCSGKSTLTQFLHAIFkGSSILHEDDFYKTDADIPVKDGvpDWDCKESLNLDSFLETLKYIRKHGDlpthlhnrdnlnvakealtqyneilke 106
                 689***************888655544444444444444444444553333333333333344444444433555555555555555533333334444 PP

      AAA_18  70 ......aleegknlvidghlaeleseaakdikk....vvLtaspeelleRlekRg 114
                       ++ + k + +dg++    +e             L ++ ++l+ R e R+
  EPX72300.1 107 ypespiSSSDYKFIFVDGFMLYVNQELIQ---SfdlcLMLACDFDTLKARRESRK 158
                 44577777777777777777666666444...14568**************9996 PP

>> PRK  Phosphoribulokinase / Uridine kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.4   1.6e-06    0.0071       1     141 [.       7     148 ..       7     158 .. 0.69
   2 ?   -3.4   0.0       1.5   6.7e+03     128     148 ..     198     218 ..     190     220 .. 0.79

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.6e-06
         PRK   1 vIgvagsSGaGkttvarklekifgrekvkaaeiegdsflrldraekdleleerkrakekevsflspeandfdllyevlkelkegkkvdkpiYsheteea 99 
                 ++gv+g+S +Gk+t+++ l+ if+          g s+l  d ++k  +       k+   +++  e  ++d   e+lk  +  k++d p+  h+ +++
  EPX72300.1   7 IVGVSGASCSGKSTLTQFLHAIFK----------GSSILHEDDFYKTDA---DIPVKDGVPDWDCKESLNLDSFLETLKYIR--KHGDLPTHLHNRDNL 90 
                 79**********************..........455666666654322...222233335778888888888888888887..567788888888887 PP

         PRK 100 ap................dkeeliegadvlviEGlhalydervaelldlkiyvdisid 141
                                   + +   ++ + ++++G    + +++ +  dl   +  + d
  EPX72300.1  91 NVakealtqyneilkeypESPISSSDYKFIFVDGFMLYVNQELIQSFDLCLMLACDFD 148
                 7766777777777777755555666677777777666666667777777776666655 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 1.5
         PRK 128 elldlkiyvdisidlelarkl 148
                 +l+d +i + +++++ + + +
  EPX72300.1 198 KLIDSSIQLSPVSNMSVQQNV 218
                 578899999999999888765 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.4e-05     0.063       4      28 ..      10      36 ..       7      40 .. 0.81
   2 ?   -3.1   0.0       1.9   8.4e+03      19      34 ..      84     100 ..      72     123 .. 0.63

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.4e-05
      AAA_28  4 itGgestGKTtlleaLaar..gypvvp 28
                ++G++++GK+tl++ L+a   g ++++
  EPX72300.1 10 VSGASCSGKSTLTQFLHAIfkGSSILH 36
                79**************98655666655 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 1.9
      AAA_28  19 Laar.gypvvpEaarei 34 
                 L++r + +v +Ea +++
  EPX72300.1  84 LHNRdNLNVAKEALTQY 100
                 44443444445544443 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   5.2e-05      0.23       4      36 ..      10      43 ..       7     168 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 5.2e-05
      AAA_33  4 lvGlpGsGKstlaerllkklg.avllssdtlrrr 36
                + G+++sGKstl + l++  +   +l +d+++++
  EPX72300.1 10 VSGASCSGKSTLTQFLHAIFKgSSILHEDDFYKT 43
                679************9977767888899986654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       506  (0.0282224); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.31s 00:00:00.85 Elapsed: 00:00:00.50
# Mc/sec: 1375.84
//
Query:       EPX72301.1  [L=1232]
Description: ATPase with bromodomain protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.9e-48  164.2   0.0    3.5e-42  144.0   0.0    2.8  2  AAA              ATPase family associated with various cellul
    5.8e-10   38.8   0.0    1.4e-09   37.6   0.0    1.6  1  AAA_lid_3        AAA+ lid domain
    2.7e-07   30.9   0.0    1.1e-06   28.8   0.0    2.0  2  AAA_2            AAA domain (Cdc48 subfamily)
    4.6e-07   30.4   0.2    4.9e-05   23.8   0.0    3.1  3  AAA_16           AAA ATPase domain
    6.3e-05   22.8   0.0     0.0016   18.2   0.0    2.5  2  IstB_IS21        IstB-like ATP binding protein
     0.0022   18.0   0.0      0.016   15.2   0.0    2.5  1  AAA_5            AAA domain (dynein-related subfamily)
     0.0032   17.5   0.0       0.15   12.1   0.0    3.0  3  AAA_14           AAA domain
     0.0044   16.6   0.0       0.34   10.4   0.0    2.5  2  AAA_7            P-loop containing dynein motor region
     0.0045   17.1   0.0      0.021   15.0   0.0    2.1  2  AAA_33           AAA domain
     0.0079   16.5   0.2       0.27   11.5   0.1    3.3  2  AAA_22           AAA domain
  ------ inclusion threshold ------
       0.02   15.5   0.3        0.1   13.2   0.0    2.3  2  AAA_18           AAA domain
      0.028   14.2   0.0      0.066   13.0   0.0    1.6  1  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
      0.033   14.6   0.0       0.15   12.5   0.0    2.2  1  RNA_helicase     RNA helicase
      0.037   13.2   0.0      0.065   12.4   0.0    1.3  1  TIP49            TIP49 P-loop domain
      0.053   13.2   0.0        2.3    7.9   0.0    3.0  3  Sigma54_activat  Sigma-54 interaction domain
      0.056   12.8   0.1       0.16   11.3   0.1    1.7  1  Mg_chelatase     Magnesium chelatase, subunit ChlI
       0.06   13.3   0.0       0.23   11.5   0.0    2.0  1  ResIII           Type III restriction enzyme, res subunit
      0.082   13.1   0.1       0.39   10.9   0.0    2.1  2  AAA_28           AAA domain
       0.13   12.1   0.0       0.48   10.3   0.0    2.1  1  NACHT            NACHT domain
       0.19   11.1   0.1       0.55    9.7   0.0    1.7  2  PhoH             PhoH-like protein
       0.59    9.9   0.0       0.59    9.9   0.0    2.6  3  AAA_11           AAA domain


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.0   0.0   4.1e-45   3.5e-42       1     131 [.     425     559 ..     425     560 .. 0.95
   2 !   17.4   0.0   5.4e-06    0.0046       2     120 ..     726     837 ..     725     844 .. 0.82

  Alignments for each domain:
  == domain 1  score: 144.0 bits;  conditional E-value: 4.1e-45
                 EEEESSTTSSHHHHHHHHHHHH.....THEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHH CS
         AAA   1 vllyGppGtGKTllakavakel.....gvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteld 94 
                 vl++GppGtGKTl+a+a+a ++     +v+f+  +gs++lsk+vge+e+++r lf+eak+ + psi+f+DEid la++r++++++ ++++v++Ll+ +d
  EPX72301.1 425 VLFHGPPGTGKTLMARALAANCsvgnqKVSFFLRKGSDCLSKWVGEAERQLRLLFEEAKKAQ-PSIIFFDEIDGLAPTRTSRQDQTHSSIVSTLLALMD 522
                 79*******************855555699*****************************998.****************999***************** PP

                 HTTTSSSTEEEEEEESSGGGSTHHHHS.TTSSEEEETT CS
         AAA  95 gvkkkeskvivigatnrpdkldpallr.gRfdrkieie 131
                 g++++ ++v+vigatnrp+++d+al+r gRfdr+++++
  EPX72301.1 523 GLDSR-GQVVVIGATNRPNDIDSALRRpGRFDREFYFS 559
                 ****7.66***************************997 PP

  == domain 2  score: 17.4 bits;  conditional E-value: 5.4e-06
                 EEESSTTSSHHHHHHHHHHHH.THEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTS CS
         AAA   2 llyGppGtGKTllakavakel.gvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkk 99 
                 +++G  G G ++l   +  +l g+++ +++ s+ll +     ++++ ++f++a++++ psi+f+ ++++         s++  ++ + Ll+ l   +  
  EPX72301.1 726 IITGHQGYGQSYLNTDLFGSLdGIYVQSLDISKLLMDSEVSLNSSLINIFASARQQS-PSIIFVNNVEQWPVLF----SQNFLDIFSLLLNSLIPTEP- 818
                 789******************56************7777777888889999*****9.**********974444....45577788888888887776. PP

                 SSTEEEEEEESS.GGGSTHHHH CS
         AAA 100 eskvivigatnr.pdkldpall 120
                    v++ig++n+ +++l++ ++
  EPX72301.1 819 ---VMLIGVANTtYNDLPEVVR 837
                 ...9999999997677766555 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.6   0.0   1.7e-12   1.4e-09       4      38 ..     586     620 ..     585     630 .. 0.91

  Alignments for each domain:
  == domain 1  score: 37.6 bits;  conditional E-value: 1.7e-12
   AAA_lid_3   4 lkeLAerTeGySGADlaalcreAallAlrrgikei 38 
                 l++LA +T Gy GADl+alc eAal A+rr+ ++i
  EPX72301.1 586 LSDLATATSGYGGADLKALCTEAALQAVRRCYPQI 620
                 789***************************97765 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.8   0.0   1.3e-09   1.1e-06       6     105 ..     425     523 ..     421     530 .. 0.82
   2 ?   -3.3   0.0       9.8   8.3e+03       8      78 ..     727     792 ..     725     793 .. 0.77

  Alignments for each domain:
  == domain 1  score: 28.8 bits;  conditional E-value: 1.3e-09
                 EEEE--TTSSHHHHHHHHHHHTT-.....-EEEEEGGG-------THHHHHHHHHTTT-...HHHHTTSEEEEETGGG-------------HHHHHHHH CS
       AAA_2   6 illlgptgvGktelakalaellfv.kkekkliradaselleeeevehlvsrligappgy...vgaeegGivllDEidKihpkessgadvSregVqrdLL 100
                 +l+ gp g+Gkt++a+ala   +v +++ ++     s+ l      + v + + +        ++++  i+++DEid  +p+++s++d  +  ++  LL
  EPX72301.1 425 VLFHGPPGTGKTLMARALAANCSVgNQKVSFFLRKGSDCLS-----KWVGEAERQLRLLfeeAKKAQPSIIFFDEIDGLAPTRTSRQDQTHSSIVSTLL 518
                 689********************987788888888888888.....44444444444440004455666****************************** PP

                 HHHH- CS
       AAA_2 101 qileg 105
                  +++g
  EPX72301.1 519 ALMDG 523
                 ***98 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 9.8
                 EE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTSEEEEETGG CS
       AAA_2   8 llgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegGivllDEid 78 
                 ++g++g G+++l+  l   l+      +  +d s+ll   ++e ++++ +++  +  +++   i+++ +++
  EPX72301.1 727 ITGHQGYGQSYLNTDLFGSLD---GIYVQSLDISKLLM--DSEVSLNSSLINIFASARQQSPSIIFVNNVE 792
                 567778888888877777777...46778889999999..8888888888888888888888899988887 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.0   5.8e-08   4.9e-05      24     139 ..     422     532 ..     414     534 .. 0.74
   2 ?   -0.3   0.0       1.4   1.2e+03      25      48 ..     723     746 ..     705     759 .. 0.81
   3 ?    1.6   0.0      0.36   3.1e+02     115     169 ..     763     821 ..     750     822 .. 0.77

  Alignments for each domain:
  == domain 1  score: 23.8 bits;  conditional E-value: 5.8e-08
      AAA_16  24 pelvllsGesGvGKsslvrellr..alekdggiflrgkcdqlesaipysalaqalareellrqlldeaesaeleawrekleealaavpelagaeasrll 120
                 p+ vl++G++G+GK+ ++r+l+   ++  +++ f+  k  ++     +s ++  ++r +l    +++++++    + +++++ +    +  ++ +s++ 
  EPX72301.1 422 PRGVLFHGPPGTGKTLMARALAAncSVGNQKVSFFLRKGSDC-----LSKWVGEAER-QLRLLFEEAKKAQPSIIFFDEIDGLAPTRTSRQDQTHSSIV 514
                 599*******************97777777999999999999.....5669999944.66555555566666666666666666655555555559999 PP

      AAA_16 121 ellkrllallsrderplvl 139
                  +l +l++ l ++++ +v+
  EPX72301.1 515 STLLALMDGLDSRGQ-VVV 532
                 999999988887676.555 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 1.4
      AAA_16  25 elvllsGesGvGKsslvrellral 48 
                 + ++++G++G G s l + l+ +l
  EPX72301.1 723 PRLIITGHQGYGQSYLNTDLFGSL 746
                 4578**********9988888665 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.36
      AAA_16 115 easrllellkrllallsrderplvlvlDdlq....wadeaslqllaaLlrllesk.pllv 169
                 ++ +l+  l +++a +++ ++p ++++ +++     + +  l+++++Ll +l    p+++
  EPX72301.1 763 SEVSLNSSLINIFASARQ-QSPSIIFVNNVEqwpvLFSQNFLDIFSLLLNSLIPTePVML 821
                 44789999*****99999.999********987777777888887777776555446655 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   1.9e-06    0.0016      49     119 ..     424     498 ..     419     518 .. 0.80
   2 ?    1.5   0.0      0.25   2.1e+02      48      65 ..     723     740 ..     680     749 .. 0.69

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 1.9e-06
   IstB_IS21  49 nivllGpsGvGKshlaialgveavraglsvlfvr...vedLveelkrarrdgklaralkrllkvdllilDdl.gl 119
                 ++++ Gp+G+GK+ +a al+ +    + +v+f+     + L + +  a+r+ +l  + ++ ++++++  D++ gl
  EPX72301.1 424 GVLFHGPPGTGKTLMARALAANCSVGNQKVSFFLrkgSDCLSKWVGEAERQLRLLFEEAKKAQPSIIFFDEIdGL 498
                 68999****************999999999997512134577889999999999999999999999999998444 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.25
   IstB_IS21  48 enivllGpsGvGKshlai 65 
                   ++++G+ G G s+l +
  EPX72301.1 723 PRLIITGHQGYGQSYLNT 740
                 4689***********986 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   1.8e-05     0.016       2     134 ..     425     546 ..     424     549 .. 0.64

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.8e-05
                 EEEE--SSSSHHHHHHHGGGGB...S--EEEEE--TT--HHHHH--B--.........--------..G-SEEEEESGGG--...HHHHHHHHHHHHSS CS
       AAA_5   2 vlLvGppGtgKselaerlaaal...nreveyvqltrdtteedlkgrreikngttslvdsplvraar..egeilvlDEverae...sevlnsLlslleer 92 
                 vl  GppGtgK+ +a+ laa     n + +   l++    +d + ++    g+++++   l ++a+  +++i+++DE++ +    ++ ++  +s +   
  EPX72301.1 425 VLFHGPPGTGKTLMARALAANCsvgN-QKVSFFLRK---GSDCLSKWV---GEAERQLRLLFEEAKkaQPSIIFFDEIDGLAptrTSRQDQTHSSIVST 516
                 8999****************998844.444444444...467777887...788888888888888777889999998876621123344444444444 PP

                 EEE..-SSSEEE---......-EEEEEESS--.-TT-TTHHH CS
       AAA_5  93 rllleeggelvkaknddllerfrviatanpldrslnelspal 134
                  l l++g    +         + vi+++n+++    ++++al
  EPX72301.1 517 LLALMDGLDSRGQ--------VVVIGATNRPN----DIDSAL 546
                 4444443333322........66666666666....555555 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   0.0   0.00018      0.15       5     100 ..     425     535 ..     422     557 .. 0.69
   2 ?    1.4   0.0      0.35     3e+02       5      59 ..     725     778 ..     722     800 .. 0.64
   3 ?   -2.8   0.3       6.8   5.8e+03      50      73 ..     920     947 ..     896     948 .. 0.59

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00018
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyi..nldderdkkladpekllelileklkeekktylflDEiqev............pewekalkslvd. 88 
                 ++  G+  +GKT +++ l+ +  v ++++ ++  +  d   k   + e+ l+l++e++k+ + +++f+DEi  +            +++ ++l  l+d 
  EPX72301.1 425 VLFHGPPGTGKTLMARALAANCSVGNQKVSFFlrKGSDCLSKWVGEAERQLRLLFEEAKKAQPSIIFFDEIDGLaptrtsrqdqthSSIVSTLLALMDg 523
                 56789999***********98885544444441144443334444555667888887666799********9887777777777766666666666664 PP

      AAA_14  89 .egknldvivtGS 100
                  + ++++v+v G 
  EPX72301.1 524 lD-SRGQVVVIGA 535
                 22.4667777776 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.35
      AAA_14   5 lvitGaRrvGKTtllkqlikell...vkkesilyinldderdkkladpekllelilek 59 
                 l+itG    G ++l  +l+ +l    v++ +i  + +d+e   ++    +l++++ + 
  EPX72301.1 725 LIITGHQGYGQSYLNTDLFGSLDgiyVQSLDISKLLMDSEVSLNS----SLINIFASA 778
                 79*****************87775555555555555555444333....344555554 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 6.8
      AAA_14  50 e....kllelileklkeekktylflDEi 73 
                 +    ++++l+++++k+ kk ++ lDEi
  EPX72301.1 920 KikllSIMDLLRSRYKKFKKPIVDLDEI 947
                 1223356777777766678888999998 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0    0.0004      0.34      27      58 ..     416     447 ..     410     462 .. 0.79
   2 ?    3.2   0.0     0.066        56       5      62 ..     694     751 ..     691     768 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.0004
       AAA_7  27 elllknkkpvllvGptGtGKtviikdllkkld 58 
                 +  ++  + vl+ Gp GtGKt++++ l  +++
  EPX72301.1 416 HFRMTPPRGVLFHGPPGTGKTLMARALAANCS 447
                 555666788***************99888776 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.066
       AAA_7   5 eeakfseilVptvdtvrysyllelllknkkpvllvGptGtGKtviikdllkkldkeky 62 
                 ++ +f++i    ++  +  y l++ +  +  ++++G++G G + + +dl+ +ld   +
  EPX72301.1 694 KSSSFQNISLSEIKKQKEIYSLKKTMVFRPRLIITGHQGYGQSYLNTDLFGSLDGIYV 751
                 677899999999999999999**************************99999984444 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   2.4e-05     0.021       2      33 ..     425     491 ..     425     576 .. 0.59
   2 ?   -1.8   0.0       3.7   3.2e+03       3      66 ..     726     789 ..     725     804 .. 0.72

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 2.4e-05
      AAA_33   2 vllvGlpGsGKstlaerllkklg......avllssdt.............................l 33 
                 vl++G+pG+GK+  a+ l+++         ++l++ +                             +
  EPX72301.1 425 VLFHGPPGTGKTLMARALAANCSvgnqkvSFFLRKGSdclskwvgeaerqlrllfeeakkaqpsiiF 491
                 79****************9776555555534444333445555555555444444444444444442 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 3.7
      AAA_33   3 llvGlpGsGKstlaerllkklgavllssdtlrrrlfgtdqqsktdytrvldrlyqilnelarka 66 
                 ++ G++G G s+l + l   l+++ + s ++++ l  +++   + ++++  +++q+   ++  +
  EPX72301.1 726 IITGHQGYGQSYLNTDLFGSLDGIYVQSLDISKLLMDSEVSLNSSLINIFASARQQSPSIIFVN 789
                 678***************9999999999888888887777666666666666666665555555 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   0.1   0.00032      0.27       9      28 ..     426     445 ..     420     540 .. 0.81
   2 ?   -1.9   0.0       4.4   3.8e+03       8      26 ..     725     743 ..     724     765 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00032
      AAA_22   9 vvtGesGtGKTtllrrlleq 28 
                 + +G++GtGKT+ +r l+ +
  EPX72301.1 426 LFHGPPGTGKTLMARALAAN 445
                 789*************9986 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 4.4
      AAA_22   8 lvvtGesGtGKTtllrrll 26 
                 l++tG+ G G ++l   l+
  EPX72301.1 725 LIITGHQGYGQSYLNTDLF 743
                 68*********99876665 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   0.00012       0.1       1      40 [.     425     465 ..     425     521 .. 0.70
   2 ?   -1.7   0.3       4.6   3.9e+03      50      64 ..    1065    1079 ..    1030    1108 .. 0.51

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 0.00012
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf.gvnlrdvakengllle 40 
                 +l  G+pG+GKt +a++L+  + +  +++++ ++++  +l+
  EPX72301.1 425 VLFHGPPGTGKTLMARALAANCSVgNQKVSFFLRKGSDCLS 465
                 5778**************99986675555555544433333 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 4.6
      AAA_18   50 krldedkldklldal 64  
                  kr  ++ +d++ d +
  EPX72301.1 1065 KRSSKEGQDENRDMN 1079
                  222222222222222 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   7.7e-05     0.066      33      64 ..     422     453 ..     415     501 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 7.7e-05
      RuvB_N  33 ldhvllyGpPGlGkttlakiiakelgvklkit 64 
                    vl++GpPG Gkt +a+ +a++  v  +  
  EPX72301.1 422 PRGVLFHGPPGTGKTLMARALAANCSVGNQKV 453
                 5679******************9988766554 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   0.00017      0.15       1      41 [.     425     461 ..     425     493 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00017
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkklklkkkdsvysrnped 41 
                   ++++Gp+g+GK+++a+ La++ +     ++k s++   + +
    EPX72301.1 425 VLFHGPPGTGKTLMARALAANCS---VGNQKVSFFL-RKGS 461
                   689**************999887...2333344433.4444 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   7.6e-05     0.065      51      97 ..     423     472 ..     415     484 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 7.6e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  51 ravLlaGpsgtGktalaiaiskelg...edvpfvalsgsevyslevkkte 97 
                 r+vL+ Gp+gtGkt +a a++ + +   ++v f   +gs+  s  v  +e
  EPX72301.1 423 RGVLFHGPPGTGKTLMARALAANCSvgnQKVSFFLRKGSDCLSKWVGEAE 472
                 89************9988887765433789****9999999988776655 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.0    0.0027       2.3      24      48 ..     424     448 ..     416     458 .. 0.81
   2 ?    0.8   0.0      0.42   3.6e+02      90     162 ..     483     560 ..     470     564 .. 0.58
   3 ?   -0.8   0.0       1.3   1.1e+03      12      42 ..     712     742 ..     703     753 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0027
                      -EEEECSTTSSHHHHHHHHHHHSTT CS
  Sigma54_activat  24 svlitGesGtGKellaraiheaskr 48 
                       vl +G  GtGK+l+ara+ ++ + 
       EPX72301.1 424 GVLFHGPPGTGKTLMARALAANCSV 448
                      69****************9876554 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.42
                      HHTTTSEEEEETGGGS-HH...HHHHHHHHHHHSEEESBTSSSEEE--EEEEEEESS..-HHHHHHT.TSS-HHHHHHH CS
  Sigma54_activat  90 ekadgGtlfLDeigelple...lQekLlrvlqegevervGsskeikvdvriiaatne..dleeavee.gkfredLyyrl 162
                      +ka+ +++f+Dei  l ++    Q +    + +  +  + +    + +v +i atn+  d+++a+++ g+f +++y+ l
       EPX72301.1 483 KKAQPSIIFFDEIDGLAPTrtsRQDQTHSSIVSTLLALMDG-LDSRGQVVVIGATNRpnDIDSALRRpGRFDREFYFSL 560
                      56777899999999887641114555555554444433333.3344566667777653355555543356666666655 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 1.3
                      HHHHHHHCTSSS-EEEECSTTSSHHHHHHHH CS
  Sigma54_activat  12 leqikkvaktdlsvlitGesGtGKellarai 42 
                      + ++kk++  + +++itG +G G ++l + +
       EPX72301.1 712 IYSLKKTMVFRPRLIITGHQGYGQSYLNTDL 742
                      5566777777788999999999999887665 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   0.00019      0.16      25      43 ..     425     443 ..     422     452 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00019
  Mg_chelatase  25 lllvGppGsGKtmlakrlp 43 
                   +l+ GppG+GKt++a++l+
    EPX72301.1 425 VLFHGPPGTGKTLMARALA 443
                   799*************996 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00027      0.23      22      84 ..     420     485 ..     391     527 .. 0.66

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00027
                 .TTSEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSHHHHHHHH....HHGGGGTGG.... CS
      ResIII  22 krdkrglikmaTGtGKTlvaaklierllkkgkeekflflvprkslleqtl....eefkkflseayke 84 
                 +  + +l++ + GtGKTl+a +l+++++   +++  +fl  + + l+++     ++++ +++ea+k+
  EPX72301.1 420 TPPRGVLFHGPPGTGKTLMARALAANCSVG-NQKVSFFLRKGSDCLSKWVgeaeRQLRLLFEEAKKA 485
                 4556788******************99984.555677888888898888844444445555555444 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00046      0.39       2      23 ..     425     449 ..     424     489 .. 0.81
   2 ?   -1.4   0.1       2.9   2.5e+03      99     142 ..    1033    1083 ..    1020    1090 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00046
      AAA_28   2 ivitGgestGKTtlleaLaar...g 23 
                 + + G+++tGKT +++aLaa+   g
  EPX72301.1 425 VLFHGPPGTGKTLMARALAANcsvG 449
                 6799***************875553 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 2.9
      AAA_28   99 eleaaarekr.ydlvfllppap....eidddgeR..redleereaiderlr 142 
                  +l a+++ ++ +d vf+ +  +    ei++ + R  +e+++e +++++rl 
  EPX72301.1 1033 YLSAELNLEEmIDQVFIYECQEmeerEITRKKKRssKEGQDENRDMNRRLM 1083
                  466666644427889999976667888877778844578888888888875 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00057      0.48       3      44 ..     425     461 ..     423     533 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00057
                 EEEEC-TTTCHHHHHHHHHHHHCTS-SCCCC-SEEEEEETTT CS
       NACHT   3 vilqGeaGsGKTtLlqklalawaegklpqgafklvFflslre 44 
                 v+ +G++G GKT +++ la     g+  q   k++Ffl+ ++
  EPX72301.1 425 VLFHGPPGTGKTLMARALAANCSVGN--Q---KVSFFLRKGS 461
                 789**************999988888..3...6788877655 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   0.00064      0.55      23      44 ..     426     447 ..     420     461 .. 0.83
   2 ?   -4.0   0.0       9.9   8.5e+03      91     127 ..     910     946 ..     907     946 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00064
                 EEE--TTSSTTHHHHHHHHHHH CS
        PhoH  23 faiGpaGtGKtylavalaveal 44 
                    Gp GtGKt++a ala++  
  EPX72301.1 426 LFHGPPGTGKTLMARALAANCS 447
                 668**************99864 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 9.9
                 S-TTCHHHHHHTTSEEEEEGGGGTT--B-SEEEEE-S CS
        PhoH  91 lgaekvekllekgkievaplaymRGrTlndafvilDE 127
                 l+++k+++ l+ + + +++l   R + +++ +v lDE
  EPX72301.1 910 LNNRKIKNKLKIKLLSIMDLLRSRYKKFKKPIVDLDE 946
                 6677777777777788888877777777777777776 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.3       9.5   8.1e+03     150     191 ..     240     281 ..     178     291 .. 0.53
   2 ?    9.9   0.0   0.00069      0.59      20      41 ..     425     446 ..     415     487 .. 0.81
   3 ?   -1.1   0.7       1.5   1.3e+03     122     161 ..    1053    1092 ..    1019    1130 .. 0.56

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 9.5
      AAA_11 150 eklkkskekskskleqerrklkkerkelskeleeaeesleee 191
                 + ++  ++ s+ + + + + ++k+  +++++l+++ ++ ++e
  EPX72301.1 240 RLSQPLRRSSRVQTRSSVESSNKSPLNVRNKLRNRSARPTHE 281
                 333333444444444444444444444444444444444444 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00069
      AAA_11  20 tliqGPPGtgKTktivellsql 41 
                 +l++GPPGtgKT +  +l ++ 
  EPX72301.1 425 VLFHGPPGTGKTLMARALAANC 446
                 699*********8877776655 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 1.5
      AAA_11  122 kaqlakeiskeleklakelrafeeeeekeklkkskeksks 161 
                  + +  +ei++++++ +ke ++++++ +++  +++ + +++
  EPX72301.1 1053 QEMEEREITRKKKRSSKEGQDENRDMNRRLMNNNVNANAN 1092
                  3333444444444444444444444444333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1232 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       899  (0.0501422); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                        23  (0.00128284); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              21  [number of targets reported over threshold]
# CPU time: 0.88u 0.32s 00:00:01.20 Elapsed: 00:00:00.50
# Mc/sec: 7482.89
//
Query:       EPX72302.1  [L=276]
Description: hypothetical protein SOCG_00068 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-09   38.2   0.0    2.2e-09   37.7   0.0    1.2  1  TMEM223   Transmembrane protein 223


Domain annotation for each model (and alignments):
>> TMEM223  Transmembrane protein 223
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.7   0.0   1.3e-13   2.2e-09       5     152 ..     108     258 ..     104     261 .. 0.76

  Alignments for each domain:
  == domain 1  score: 37.7 bits;  conditional E-value: 1.3e-13
     TMEM223   5 lyksertkffrllgl...faivqlifWsylaslafttlkdteveseekeeeelssnkkrvgltlicllvgvlilllgllf..plRsvkkvvllkggktv 98 
                 +y++e++k++r+l+l   + +++  f  +l+ l +  +++ e   ++  + + s++ +r+   + cl++ +l l++++lf  p+R+v++v+ l  ++++
  EPX72302.1 108 IYQAENDKTYRFLYLlflATTLNAAFFATLTGLDM--YRSGELGFQNWYTYTYSEKVMRI---GSCLVIPLLYLATAFLFflPRRTVHSVYAL-PARQI 200
                 8***********99722145566666666666555..44444444555555578888898...6788888888888777777********999.7899* PP

     TMEM223  99 eivTyapfgkk.....rsfevplkqvsckqsrseaksqiplkvkgkrfyylLDkkGefk 152
                 e++T  p  ++     +s++ p ++v + +++  +k+ + +kv g rf+ylLD++G+f+
  EPX72302.1 201 EFKTGLPGPNNhlyfeKSIKLPRNEVFILSQS-LDKNPMVMKVNGTRFFYLLDTNGNFT 258
                 ****87766555555577999*9999988665.55667789****************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (276 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       367  (0.0204696); expected 358.6 (0.02)
Passed bias filter:                      296  (0.0165096); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.28s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 1885.93
//
Query:       EPX72303.1  [L=185]
Description: beta-glucan synthesis-associated protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.5e-09   34.2   0.0    1.3e-08   33.7   0.0    1.1  1  SKN1      Beta-glucan synthesis-associated protein (SKN1)
  ------ inclusion threshold ------
       0.84    9.7   3.8        1.2    9.2   3.8    1.1  1  Sensor    Putative sensor


Domain annotation for each model (and alignments):
>> SKN1  Beta-glucan synthesis-associated protein (SKN1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.7   0.0   1.4e-12   1.3e-08       7      74 ..     122     182 ..     117     185 .] 0.86

  Alignments for each domain:
  == domain 1  score: 33.7 bits;  conditional E-value: 1.4e-12
        SKN1   7 ekekDDylhnpdpeakadkkkkvkdlklldkrgllnvlgllllvlgllllfivlPvltylgkkekest 74 
                  ke DD lhn d        +  +d+++++ rg++n+l+l+ll++gll+lfi++P+l+ +++++++++
  EPX72303.1 122 VKEVDDILHNEDF-------HDGRDFNVFTLRGFVNILTLILLSCGLLMLFIGYPILSAVNVEKQRKK 182
                 5899******955.......3457899********************************977776655 PP

>> Sensor  Putative sensor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   3.8   0.00013       1.2      12      39 ..     147     174 ..     142     176 .. 0.90

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00013
      Sensor  12 afvllvtglslglgllvllvGlplLala 39 
                  fv ++t+++l+ gll+l++G p+L ++
  EPX72303.1 147 GFVNILTLILLSCGLLMLFIGYPILSAV 174
                 68999********************876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       482  (0.0268838); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1365.82
//
Query:       EPX72304.1  [L=836]
Description: RNA-binding protein Mrd1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.4e-68  225.0   3.5    3.9e-19   68.2   0.0    5.6  5  RRM_1           RNA recognition motif. (a.k.a. RRM, RBD, or R
    2.8e-08   33.4   0.0       0.12   12.0   0.0    5.1  5  RRM_5           RNA recognition motif. (a.k.a. RRM, RBD, or R
    0.00011   22.0   0.0       0.52   10.2   0.0    4.4  4  RRM_occluded    Occluded RNA-recognition motif
     0.0019   18.3   0.1        6.8    6.9   0.0    4.0  5  RRM_7           RNA recognition motif
  ------ inclusion threshold ------
      0.015   14.9   0.3         11    5.7   0.0    4.1  4  SET_assoc       Histone lysine methyltransferase SET associat
      0.046   13.7   0.1        3.7    7.6   0.0    3.3  3  Nup35_RRM_2     Nup53/35/40-type RNA recognition motif
        6.2    7.1   5.7        5.7    7.2   2.1    2.8  2  Chordopox_A13L  Chordopoxvirus A13L protein


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.6   0.1   8.3e-11   2.1e-07       1      69 [.       4      76 ..       4      77 .. 0.88
   2 !   68.2   0.0   1.5e-22   3.9e-19       1      70 []     323     393 ..     323     393 .. 0.98
   3 !   23.5   0.0   1.4e-08   3.6e-05       4      67 ..     509     567 ..     506     570 .. 0.92
   4 !   44.5   0.1   3.8e-15   9.7e-12       1      69 [.     621     695 ..     621     696 .. 0.90
   5 !   54.5   0.0   2.9e-18   7.5e-15       1      69 [.     723     791 ..     723     792 .. 0.96

  Alignments for each domain:
  == domain 1  score: 30.6 bits;  conditional E-value: 8.3e-11
                EEEESETTTSSHHHHHHHHHTTS....CEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1  1 lfVgnLppdvteeeLkelFskfG....piksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69
                ++V+nLp+++ +e+L+++++       +i+++++ ++++g s++faf+ F+++ dAek ++ l++  ++++++
  EPX72304.1  4 IIVKNLPSYYEKEQLSKYLKSQSnldvEITDVSVAKTKDGVSRRFAFIGFKNEQDAEKTVRYLDRSFIDSSRV 76
                78*******************8834334677777777****************************99998765 PP

  == domain 2  score: 68.2 bits;  conditional E-value: 1.5e-22
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrelk 70 
                 lf++nL++++tee+++++F+ fG  + + ++ d +t+ +kgfa+VeF + e+A +A ++l+g+ ++gr l+
  EPX72304.1 323 LFLRNLTYSCTEEDISAHFQRFGALEQVHMPIDkRTNAPKGFAYVEFRNAENAVQAFQELDGRPFQGRLLH 393
                 89*****************************************************************9875 PP

  == domain 3  score: 23.5 bits;  conditional E-value: 1.4e-08
                 ESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTE CS
       RRM_1   4 gnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggr 67 
                 +n+p+ ++ eeL  lF+++G+  ++ +++     +  +a +eF +  dA++A  +l  + ++++
  EPX72304.1 509 KNFPYGTSAEELTSLFGQYGELGRVLIPP-----AGTIAVIEFINAPDARQAFGKLAYTRIKSS 567
                 8****************************.....59*****************99988888765 PP

  == domain 4  score: 44.5 bits;  conditional E-value: 3.8e-15
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE......TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd......etgkskgfafVeFeskedAekAlealngkklggrel 69 
                 l+V+nL+++++++e   +F++ +++ s+ +  +       +  s+gf+fVeF++k  A +A++a+ng  l g++l
  EPX72304.1 621 LYVKNLNFSTKQSEFQSIFKPLEGYLSAVIRAKpdpkrpGQFLSMGFGFVEFKNKQFAVAAMQAMNGFVLAGHKL 695
                 8*****************************999965533333489***************************998 PP

  == domain 5  score: 54.5 bits;  conditional E-value: 2.9e-18
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 + V+nLp++++++++  lF+ +G+ +s++++r+ +++++gfaf eF + ++Ae+A++al ++ l gr l
  EPX72304.1 723 ILVKNLPFEASKKDIQSLFGAYGQLRSVRVPRKFDRSARGFAFAEFVTAREAENAMNALKHTHLLGRHL 791
                 68***********************************************************99999865 PP

>> RRM_5  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.0      0.24   6.1e+02      66     121 ..      48     103 ..      31     106 .. 0.81
   2 ?    3.0   0.0     0.029        73      64     103 ..     362     401 ..     339     415 .. 0.84
   3 ?    3.7   0.0     0.017        43      25      59 ..     502     535 ..     490     574 .. 0.73
   4 !    7.6   0.1    0.0011       2.8      68     108 ..     669     709 ..     662     719 .. 0.81
   5 !   12.0   0.0   4.6e-05      0.12      18      97 ..     712     794 ..     704     805 .. 0.82

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.24
       RRM_5  66 talvqmgdasaveravqHLnnaklfgkrlevalSKqqavsekepfeleddspsfkd 121
                  a++   +++++e++v  L    +  +r++v +    + ++++ +   ++s+ +k+
  EPX72304.1  48 FAFIGFKNEQDAEKTVRYLDRSFIDSSRVQVRVALDYQTANEKLRPWSKHSAKTKE 103
                 478889999***************889*9999999888888888888888888887 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.029
       RRM_5  64 ketalvqmgdasaveravqHLnnaklfgkrlevalSKqqa 103
                 k+ a v+  +a ++ +a q L + +  g+ l++ + K ++
  EPX72304.1 362 KGFAYVEFRNAENAVQAFQELDGRPFQGRLLHILPAKARH 401
                 78999****************************9999654 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.017
       RRM_5  25 egsVllVyglepdkvnldklFnlfclYgnvervkf 59 
                 +  V+l  ++   +  +++l  lf++Yg++ rv +
  EPX72304.1 502 SDNVILAKNFPYGT-SAEELTSLFGQYGELGRVLI 535
                 55677777776554.578999************87 PP

  == domain 4  score: 7.6 bits;  conditional E-value: 0.0011
       RRM_5  68 lvqmgdasaveravqHLnnaklfgkrlevalSKqqavseke 108
                 +v+  + + +  a+q +n+  l g++le++lS q a + +e
  EPX72304.1 669 FVEFKNKQFAVAAMQAMNGFVLAGHKLEIKLSHQGADAAAE 709
                 688888888899**********************9855444 PP

  == domain 5  score: 12.0 bits;  conditional E-value: 4.6e-05
       RRM_5  18 pgaagvaegsVllVyglepdkvnldklFnlfclYgnverv....kflktkketalvqmgdasaveravqHLnnaklfgkrleva 97 
                 +  + +++g+ +lV +l  + +  + +  lf+ Yg+++ v    kf ++ ++ a+ +   a+++e a++ L+ ++l g++l ++
  EPX72304.1 712 KRDSSKPKGTKILVKNLPFEASK-KDIQSLFGAYGQLRSVrvprKFDRSARGFAFAEFVTAREAENAMNALKHTHLLGRHLVLQ 794
                 45677888999999999776554.5678899999999987556678999*****************************988765 PP

>> RRM_occluded  Occluded RNA-recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.29   7.5e+02       8      65 ..       8      73 ..       3      79 .. 0.70
   2 !   10.2   0.0    0.0002      0.52      12      70 ..     331     394 ..     321     399 .. 0.78
   3 ?    1.6   0.0       0.1   2.6e+02      13      54 ..     515     555 ..     504     569 .. 0.85
   4 ?    3.0   0.0     0.036        92      42      70 ..     669     697 ..     666     701 .. 0.94

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.29
  RRM_occluded  8 plsDtvnkariralveek...egeikkivLvpdheG.....AivefkdekiagkasLaLdgsefeg 65
                  +l+    k+++++ ++++   + ei+++ +   + G     A++ fk+e++a k +  Ld s ++ 
    EPX72304.1  8 NLPSYYEKEQLSKYLKSQsnlDVEITDVSVAKTKDGvsrrfAFIGFKNEQDAEKTVRYLDRSFIDS 73
                  555556677777777777666567777777776666666669999******999887777776665 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.0002
  RRM_occluded  12 tvnkariralveekegeikkivLvpdheG......AivefkdekiagkasLaLdgsefegkklrc 70 
                     +++ i+a+++   g+++++++  d++       A vef++++ a +a  +Ldg  f+g+ l++
    EPX72304.1 331 SCTEEDISAHFQRF-GALEQVHMPIDKRTnapkgfAYVEFRNAENAVQAFQELDGRPFQGRLLHI 394
                   56777888888888.888888877666433333359**************************997 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.1
  RRM_occluded  13 vnkariralveekegeikkivLvpdheGAivefkdekiagka 54 
                    + +++++l+ ++ ge+ ++++ p    A++ef ++ +a +a
    EPX72304.1 515 TSAEELTSLFGQY-GELGRVLIPPAGTIAVIEFINAPDARQA 555
                   5778899999***.*******************999998655 PP

  == domain 4  score: 3.0 bits;  conditional E-value: 0.036
  RRM_occluded  42 ivefkdekiagkasLaLdgsefegkklrc 70 
                   +vefk+++ a  a+ a++g  ++g+kl++
    EPX72304.1 669 FVEFKNKQFAVAAMQAMNGFVLAGHKLEI 697
                   69***********************9975 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       1.5   3.9e+03       5      62 ..       5      58 ..       2      74 .. 0.69
   2 ?   -2.1   0.0       1.7   4.3e+03      65      89 ..     134     158 ..     127     160 .. 0.79
   3 !    6.9   0.0    0.0026       6.8       3      64 ..     322     377 ..     320     383 .. 0.74
   4 ?   -2.7   0.0       2.6   6.7e+03      11      28 ..     513     530 ..     510     577 .. 0.79
   5 !    6.0   0.0    0.0051        13       2      38 ..     721     759 ..     720     784 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 1.5
       RRM_7  5 FvGGlPiDiteeelkatfkefgkvlvdwPkkaeskkkaaenskaakgyvflvfedeks 62
                 v  lP   ++e+l++ +k+ +++ v+    +  k+k      + + ++f+ f++e+ 
  EPX72304.1  5 IVKNLPSYYEKEQLSKYLKSQSNLDVEITDVSVAKTKDG----VSRRFAFIGFKNEQD 58
                566677777888888888888888888777655544443....334688888887765 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.7
       RRM_7  65 aLleacteeeeelylklssrrlksk 89 
                 + ++  + ++ +++l+ls+++++s+
  EPX72304.1 134 KFIDTLQDDKARTFLQLSTATSNSR 158
                 567777888899******9999877 PP

  == domain 3  score: 6.9 bits;  conditional E-value: 0.0026
       RRM_7   3 kvFvGGlPiDiteeelkatfkefgkv.lvdwPkkaeskkkaaenskaakgyvflvfed.eksvk 64 
                 ++F+  l    tee+++a f++fg++ +v  P  ++++        a kg++++ f + e++v+
  EPX72304.1 322 RLFLRNLTYSCTEEDISAHFQRFGALeQVHMPIDKRTN--------APKGFAYVEFRNaENAVQ 377
                 57888888899*************98458888776654........346888888754266666 PP

  == domain 4  score: -2.7 bits;  conditional E-value: 2.6
       RRM_7  11 iDiteeelkatfkefgkv 28 
                    + eel++ f+++g++
  EPX72304.1 513 YGTSAEELTSLFGQYGEL 530
                 556678999999999976 PP

  == domain 5  score: 6.0 bits;  conditional E-value: 0.0051
       RRM_7   2 rkvFvGGlPiDiteeelkatfkefgkvl.vdwPkk.aes 38 
                  k+ v  lP + +++++++ f+++g+++ v  P+k  +s
  EPX72304.1 721 TKILVKNLPFEASKKDIQSLFGAYGQLRsVRVPRKfDRS 759
                 5999*********************98548899884333 PP

>> SET_assoc  Histone lysine methyltransferase SET associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0     0.082   2.1e+02      37      62 ..      50      75 ..      48      79 .. 0.83
   2 ?    5.7   0.0    0.0045        11      36      59 ..     364     388 ..     358     393 .. 0.88
   3 ?   -0.9   0.0      0.51   1.3e+03      37      58 ..     669     690 ..     666     697 .. 0.83
   4 ?    1.5   0.0     0.089   2.3e+02      38      64 ..     766     792 ..     759     794 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.082
   SET_assoc 37 YivFndskeAerCfraedgtklftyr 62
                +i F++ ++Ae+ +r  d++ + ++r
  EPX72304.1 50 FIGFKNEQDAEKTVRYLDRSFIDSSR 75
                899***********999987665555 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0045
   SET_assoc  36 y.YivFndskeAerCfraedgtklf 59 
                 + Y+ F++ ++A ++f++ dg+++ 
  EPX72304.1 364 FaYVEFRNAENAVQAFQELDGRPFQ 388
                 55*******************9985 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.51
   SET_assoc  37 YivFndskeAerCfraedgtkl 58 
                 ++ F++++ A  +++a++g  l
  EPX72304.1 669 FVEFKNKQFAVAAMQAMNGFVL 690
                 899**************98655 PP

  == domain 4  score: 1.5 bits;  conditional E-value: 0.089
   SET_assoc  38 ivFndskeAerCfraedgtklftyrmv 64 
                   F + +eAe++++a  +t+l++ ++v
  EPX72304.1 766 AEFVTAREAENAMNALKHTHLLGRHLV 792
                 5588899************99987765 PP

>> Nup35_RRM_2  Nup53/35/40-type RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.11   2.7e+02      34      52 ..      44      62 ..      31      63 .. 0.72
   2 ?    7.6   0.0    0.0014       3.7      15      52 ..     335     378 ..     331     379 .. 0.87
   3 ?   -1.3   0.0      0.89   2.3e+03      21      52 ..     524     555 ..     517     556 .. 0.90

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.11
  Nup35_RRM_2 34 kevsvmyvkfesekdaekA 52
                  ++ ++++ f++e daek 
   EPX72304.1 44 VSRRFAFIGFKNEQDAEKT 62
                 46789************95 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0014
  Nup35_RRM_2  15 elVlehFasfGeIvkhyvp......kevsvmyvkfesekdaekA 52 
                  e++ +hF+ fG   +  +p        + ++yv+f++  +a +A
   EPX72304.1 335 EDISAHFQRFGALEQVHMPidkrtnAPKGFAYVEFRNAENAVQA 378
                  78889**********99999988884488********9999888 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 0.89
  Nup35_RRM_2  21 FasfGeIvkhyvpkevsvmyvkfesekdaekA 52 
                  F ++Ge  +  +p++  +++++f +  da +A
   EPX72304.1 524 FGQYGELGRVLIPPAGTIAVIEFINAPDARQA 555
                  678999999999999********999999998 PP

>> Chordopox_A13L  Chordopoxvirus A13L protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   2.1    0.0022       5.7      28      66 ..     113     151 ..     105     154 .. 0.73
   2 ?   -0.9   0.1      0.77     2e+03      29      57 ..     603     629 ..     594     642 .. 0.60

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0022
  Chordopox_A13L  28 etqttnpstveeyeeedniKtgfvdkLksdhlkslykLf 66 
                      +++++ + +e+  +e+++K  f+d L+ d+ + + +L 
      EPX72304.1 113 IQKQKELEEKEKERHEKKLKRKFIDTLQDDKARTFLQLS 151
                     333333344677778889***************998885 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.77
  Chordopox_A13L  29 tqttnpstveeyeeedniKtgfvdkLksd 57 
                     ++ ++ +  e  ++ d + t +v +L+ +
      EPX72304.1 603 QSAKELE-SEDVDSVD-TATLYVKNLNFS 629
                     3333333.47777777.669999999844 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (836 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2429  (0.135479); expected 358.6 (0.02)
Passed bias filter:                      572  (0.0319036); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.86u 0.31s 00:00:01.17 Elapsed: 00:00:00.49
# Mc/sec: 5122.83
//
Query:       EPX72305.1  [L=665]
Description: membrane transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.3e-80  268.8  16.3      1e-79  268.5  16.3    1.0  1  Anoctamin  Calcium-activated chloride channel


Domain annotation for each model (and alignments):
>> Anoctamin  Calcium-activated chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  268.5  16.3   5.6e-84     1e-79       1     437 [.     167     611 ..     167     623 .. 0.86

  Alignments for each domain:
  == domain 1  score: 268.5 bits;  conditional E-value: 5.6e-84
   Anoctamin   1 IrdyFGekiAlYFawlgfytsallppavlGlllflyglatitlfdneltvvfalfmviWatlflelWkrreaelaykWgtsdfeeeeeprpefrgelkr 99 
                 I++ +G +iAl Fa+  f+ s+l ++++ G+l ++          ++++v++++ m+iW ++f+++Wk +e++l+ +W t++ e  e+ r ef+ +  +
  EPX72305.1 167 IKSEYGSQIALHFAFQDFFRSMLGLLSLWGVLGHFL--------LQQYSVIYSIGMSIWGICFIQFWKYKESQLSRRWATNHSEYYEKSREEFHPSSIE 257
                 7899****************************8774........236*********************************99**9**********9998 PP

   Anoctamin 100 espvtgeeefyyppwkrrlfrllvslplvllliclavvgvlilrclalqelvssvke.....llsflptvlnlvlililnevykklaiwltdlEnhrtq 193
                 +++  g+ +  yp+wk+ l+ l+++ pl++  i  +v+ +li + + + + +++v++     l+ +lp+++  +l l +n +y+ +a++lt +En+rt+
  EPX72305.1 258 VNNTSGTLQSSYPHWKMVLRSLITTAPLFI--ISGIVLLILISIAFGFDVTLTEVYSgpfkpLVALLPALIFQILTLPFNIIYTIVAEKLTAWENQRTK 354
                 88999***********99999999999884..344444444444455544555555554446666********************************** PP

   Anoctamin 194 seyekslilKvflfqfvnsylslfyiaFvkgkflkypgkylr............rseecdeegcleelkeqLaiilvtkqllnnilevllPyl...... 274
                 ++y++sl  K+fl +f+ sy+ l++i++++g+f ++   ++               ++ + + ++ +l++q +++l+  q++n ++ +l+P +      
  EPX72305.1 355 NKYQSSLGSKIFLQHFMLSYTALILISYIYGPFGEHLVSNVLqnkaasmtmqlsFITDSKFQLNPLRLRNQYFYFLTNAQVINYLTTLLVPQIisylkr 453
                 *******************************999876666558999*****9998999999******************************77444333 PP

   Anoctamin 275 ..keklkkkkk...esekdekeeeeskkltqaekeyelkkyedlf.ddYlemviqfGyvtlFsaafPlapllallnniieirldafklvtelrRpvper 367
                   k       k    + + +++++e k+l++++k++el+ky+  + + Y ++v+ fGy+++Fs+++Plapl++++n  + +r+  +kl++  +Rpv+ r
  EPX72305.1 454 lvKS------KftkPRLTIQDDDAEAKSLNSIRKQSELSKYD--GyNNYKDLVLIFGYLVMFSPIYPLAPLIMYVNSHLMVRSSVYKLCRLSKRPVGAR 544
                 2211......133445566667788999*************8..45***************************************************** PP

   Anoctamin 368 aesiGiWqkilealgvlavitnallialtsdpekdteqylsvlaarlafvvvlehvvlllkyliavlipd 437
                  esi  W++ l+++++++ it   +  l s   +++ ++ ++   +l+ ++  ehv +ll+y+i+ + p 
  EPX72305.1 545 IESIQDWNQRLSFISWMGSITMPSISYLYS--PMQNLTKQKLYYSLLVGFF-SEHVWFLLRYIISSFCPV 611
                 **********************99997776..2344444555555555555.9************99885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (665 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       917  (0.0511462); expected 358.6 (0.02)
Passed bias filter:                      543  (0.0302861); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.31s 00:00:00.96 Elapsed: 00:00:00.46
# Mc/sec: 4340.96
//
Query:       EPX72306.1  [L=528]
Description: ATP-dependent RNA helicase Mss116 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-38  131.4   0.0    8.5e-38  129.9   0.1    1.7  2  DEAD        DEAD/DEAH box helicase
    1.8e-24   86.2   0.0    3.6e-23   82.0   0.0    2.4  2  Helicase_C  Helicase conserved C-terminal domain
      2e-08   34.4   0.1    3.3e-08   33.7   0.1    1.3  1  ResIII      Type III restriction enzyme, res subunit
  ------ inclusion threshold ------
      0.011   16.0   1.3       0.12   12.7   0.0    2.8  3  CEP19       CEP19-like protein
      0.073   12.8   0.1       0.11   12.2   0.1    1.3  1  AAA_30      AAA domain
       0.12   11.8   0.1       0.24   10.8   0.1    1.4  1  PhoH        PhoH-like protein
       0.13   12.8   0.1        1.1    9.8   0.0    2.4  3  BAF         Barrier to autointegration factor


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.9   0.1   3.3e-41   8.5e-38       1     175 [.      66     240 ..      66     241 .. 0.90
   2 ?   -2.4   0.0       1.3   3.4e+03      43      72 ..     291     320 ..     280     353 .. 0.70

  Alignments for each domain:
  == domain 1  score: 129.9 bits;  conditional E-value: 3.3e-41
                 -HHHHHHHHHHH.TTCEEEEEESTTSSHHHHHHHHHHHHHHHS...TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHH CS
                 xxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   1 tdiQaeaiplil.gggdvlvaaeTGsGKTlaflipvlqivyet...kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskld 95 
                 t++Q ++i+++l ++++ +v+a+TG+GKTlafl+ +++ +++     ++++   +i++PtreLa q+++++kk++  ++++++ +igg+++  ++++++
  EPX72306.1  66 TSVQGRVIQEVLsNQENAVVQAKTGTGKTLAFLLVAIKDMLKGksaLHSKKIHSVILSPTRELALQIFEEAKKLTAGTNIKTSFCIGGNSKAMEQRTIR 164
                 689*********5557************************9988776889999*********************************************9 PP

                 TT.CSEEEEEHHHHHHHHHCTSSHCTTE.EEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHHHH CS
                 xx.xxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  96 ng.vdivvgtpgrlddllstgklnlsqv.rflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkdvkk 175
                 +g ++i+++tpgr+ d+ls+ +++ s + + ++lDEadrl+d+gf d+i+ i++ +++     +   + +++SAT+p +v++
  EPX72306.1 165 KGfANILIATPGRMNDHLSNPEVRSSIMaNSFILDEADRLMDMGFADTIKDIHRDVAR-----P-FTRRLCFSATMPPKVSD 240
                 99****************9888775555588*************************43.....3.2349********88765 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.3
                 TTSTS-EEEEEESSHHHHHHHHHHHHHHTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  43 kgktgpkalivePtreLaeqtlnnlkkfkk 72 
                  +++ p++++  Pt  ++  +++ +++ ++
  EPX72306.1 291 SKQPSPRIIVFLPTIGMVDFVADLFRSHLS 320
                 468899999999998888777776666555 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.13   3.4e+02      14      73 ..     114     174 ..      81     221 .. 0.68
   2 !   82.0   0.0   1.4e-26   3.6e-23       9     111 .]     290     391 ..     281     391 .. 0.92

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.13
                 TTTSEEEEEESSHH.HHHHHHHHHHHT......TSTEEEEST.TSTHHHHHHHHHHHHTTSSSEEEES CS
  Helicase_C  14 eeggkilifvntid.rlekvklllekk......gikvavlhg.elpqnereeileqfnkgesdvLiat 73 
                 +++  ++i ++t++  l   ++++e k      +ik+  + g + ++ e++ i + f     ++Liat
  EPX72306.1 114 SKKIHSVILSPTRElAL---QIFEEAKkltagtNIKTSFCIGgNSKAMEQRTIRKGF----ANILIAT 174
                 33334478888888433...4554433344445566555555144444444444444....4577777 PP

  == domain 2  score: 82.0 bits;  conditional E-value: 1.4e-26
                 HHHHTTTTSEEEEEESSHHHHHH.HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHHHHHHHTT CS
  Helicase_C   9 llkleeeggkilifvntidrlek.vklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvtsyiqriGR 106
                 l  +++   +i++f++ti +++  ++l++++ +i +  lh++l++++r++i ++f++    +L atdv++rG+d+p+v+ V+++  p ++++yi+riGR
  EPX72306.1 290 L--SKQPSPRIIVFLPTIGMVDFvADLFRSHLSIPCFSLHSRLSTSDRRRITDRFRRAPKGILFATDVVARGMDFPNVSQVVQIFSPSTLDDYIHRIGR 386
                 3..689999************99899997777***********************998988************************************** PP

                 SSSTT CS
  Helicase_C 107 tgRag 111
                 tgRag
  EPX72306.1 387 TGRAG 391
                 ***97 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.7   0.1   1.3e-11   3.3e-08       6     169 ..      67     234 ..      44     236 .. 0.72

  Alignments for each domain:
  == domain 1  score: 33.7 bits;  conditional E-value: 1.3e-11
                 HHHHHHHHHHT......TTSEEEEEESTTSTHHHHH.HHHHHHH-S...........-EEEEESSHHHHHHHHHHGGGGTGG........GEEEESSS- CS
      ResIII   6 eyQeeaienlleklkskrdkrglikmaTGtGKTlva.aklierllkkgkee......kflflvprkslleqtleefkkflseayke....igkkvsgdk 93 
                 + Q ++i+++l      +++++++++ TGtGKTl   + +i+ +lk gk        + ++l p+++l  q  ee kk++  ++ +    i     g++
  EPX72306.1  67 SVQGRVIQEVL-----SNQENAVVQAKTGTGKTLAFlLVAIKDMLK-GKSAlhskkiHSVILSPTRELALQIFEEAKKLTAGTNIKtsfcI----GGNS 155
                 44555555555.....7899*************9885555555554.343356779999********************999976645443....3333 PP

                 B--.........-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS....TTTHHHHHT---.....SEEEEEESS- CS
      ResIII  94 kka..kekdstnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgak...kswreilekfke.....avllglTATp 169
                 k    + +++  ++il++t  +++ ++    ++ e  ++   + +i DEa rl ++   ++++ i +   +       +l ++AT+
  EPX72306.1 156 KAMeqRTIRKGFANILIATPGRMNDHL----SNPEVRSSIMANSFILDEADRLMDMgfaDTIKDIHR---DvarpfTRRLCFSATM 234
                 33333447789999**********999....4444444444559***********955445555533...2333567899****97 PP

>> CEP19  CEP19-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.17   4.4e+02      52      78 ..       7      32 ..       2     116 .. 0.83
   2 ?   -2.1   0.0       1.7   4.3e+03     110     126 ..     416     432 ..     402     444 .. 0.81
   3 ?   12.7   0.0   4.6e-05      0.12     121     162 ..     481     524 ..     459     525 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.17
       CEP19 52 rhksylervselqleklirllvlastq 78
                rh s ++r+++lql   +r+++ as++
  EPX72306.1  7 RHASAFSRCPSLQLRSFHRTVQ-ASKE 32
                7999999*******99999994.3333 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.7
       CEP19 110 leneDLNklddkeLqrv 126
                 ++n+  Nkl+d+e   +
  EPX72306.1 416 IQNHSVNKLSDEEITDF 432
                 57888999999997655 PP

  == domain 3  score: 12.7 bits;  conditional E-value: 4.6e-05
       CEP19 121 keLqrvKeeMdekFeknvikp....gDpgfeYDkevdfekeekees 162
                 + L+ +Ke M  ++ knvi++    gD gf  D ++ f+++  ++s
  EPX72306.1 481 EPLA-KKELMSSVYIKNVIRKssfkGDRGFRRDSRRPFQRKG-QKS 524
                 4454.69************9544449*************998.565 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   4.4e-05      0.11       5      65 ..      68     135 ..      64     207 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 4.4e-05
      AAA_30   5 eQaaavealltsgdrvavltGpAGtGKtta..lkalreaweaag......grviglAptgkaAkvLaee 65 
                  Q ++++++l++++  av+++  GtGKt a  l a++++++ +        + ++l+pt + A ++ ee
  EPX72306.1  68 VQGRVIQEVLSNQE-NAVVQAKTGTGKTLAflLVAIKDMLKGKSalhskkIHSVILSPTRELALQIFEE 135
                 69999*****9997.9************65215666666665535777666666788888888775544 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.1   9.4e-05      0.24       6      48 ..      66     109 ..      63     124 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 9.4e-05
                 SHHHHHHHHHHH.H-SEEEEE--TTSSTTHHHHHHHHHHHHTTS CS
        PhoH   6 tkeQkeylealk.kndivfaiGpaGtGKtylavalavealkkkk 48 
                 t+ Q ++++ +  +++  ++ +++GtGKt+  + +a++ + k+k
  EPX72306.1  66 TSVQGRVIQEVLsNQENAVVQAKTGTGKTLAFLLVAIKDMLKGK 109
                 556777776655488899999**********9999*99877654 PP

>> BAF  Barrier to autointegration factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0   0.00041       1.1      24      48 ..      47      71 ..      39      86 .. 0.88
   2 ?   -3.1   0.0       4.3   1.1e+04      48      64 ..     269     285 ..     267     294 .. 0.81
   3 ?   -1.2   0.0       1.1   2.8e+03      48      65 ..     396     413 ..     394     428 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00041
         BAF 24 aGigevlgkkLeekGfdkAyvvlgq 48
                +Gi e+++k+L+++Gf kA+ v g+
  EPX72306.1 47 KGIAETVKKNLSANGFLKATSVQGR 71
                7*********************997 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 4.3
         BAF  48 qfLvlkkdeelFkewlk 64 
                 qf v  k ++lF++ l+
  EPX72306.1 269 QFVVQTKFDSLFHDSLS 285
                 89999999999999886 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 1.1
         BAF  48 qfLvlkkdeelFkewlke 65 
                  +Lv+ k+e+ F + l++
  EPX72306.1 396 SYLVVPKQEQPFLRSLSK 413
                 5999*****999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (528 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       519  (0.0289475); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 3763.21
//
Query:       EPX72307.1  [L=870]
Description: AP-2 adaptor complex subunit Alp3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   4.6e-105  352.1  14.2   5.6e-105  351.9  14.2    1.1  1  Adaptin_N        Adaptin N terminal region
      3e-34  117.6   0.1    7.9e-34  116.2   0.0    1.8  2  Alpha_adaptin_C  Alpha adaptin AP2, C-terminal domain
    7.9e-06   26.1   0.5    7.5e-05   23.0   0.0    2.5  2  Alpha_adaptinC2  Adaptin C-terminal domain
  ------ inclusion threshold ------
      0.023   14.6   0.6        0.1   12.5   0.1    2.5  2  IFN-gamma        Interferon gamma
       0.11   13.0   0.3         12    6.5   0.0    3.6  4  HEAT_EZ          HEAT-like repeat


Domain annotation for each model (and alignments):
>> Adaptin_N  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  351.9  14.2  1.6e-108  5.6e-105       1     522 [.      26     578 ..      26     580 .. 0.94

  Alignments for each domain:
  == domain 1  score: 351.9 bits;  conditional E-value: 1.6e-108
                 XHHHCCHHHHHHCCSSS...-SCHHHHHHHHHHHHHHHCT---GHHHHHHHCCCCSS-CHHHHHHHHHHHHHCTTSCCHHCCCCHHHHHHCCSSSHHHH CS
   Adaptin_N   1 eekriqqelaeilnsnk...dddekkkeavkkliylialGedvsflffevvklvaskdfelKrlvYlylellaeesedlalLvtnslqkDlkdpnqlir 96 
                 eekri+ ela+i+ +++    +   +k++v+kl+y+++lG+++sf++ e v+l++  ++++K+++Yl++ ll++e++dl++Lv+ns++kDl + ++   
  EPX72307.1  26 EEKRINIELAKIRAKFQsstLSAYDRKKYVSKLLYIYMLGYPISFGHLEAVNLLTATKYSEKQIGYLAVALLLNENHDLIRLVINSIRKDLLSLDPDKN 124
                 689**************99966667777*********************************************************************** PP

                 HHHHHHHCCC--CCCHHHHHHHHHHHHT-SSH..HHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHCTT-SSHHHHHHHHHHHHHHHCCCCCCC.HHHHH CS
   Adaptin_N  97 glALrvLssirvpelaedlapaikkllkdrsp..yvrkkAalailklykkdpdllrkqlveeikellsdkdpgvvlaAvalleeikkndrlll.kllpk 192
                 +lAL+++++++ +el+e+++p+i++ll +  +   vr+kAal++l++y+k +d++ ++l+e i+ ll+d+d  v la+ +    i + + +l   + +k
  EPX72307.1 125 ALALHAVANFGGRELCEAVYPEIQQLLMSAATenIVRQKAALSLLHIYRKFSDIMDMDLLEPIIMLLDDDDLNVSLAVSNFVFLIICREPSLHgLVCRK 223
                 ***************************9877667*********************999*************99988776655555577777777999** PP

                 HHCCHHHHH............HCS-HHHHHHHHHHHCC---SSHHHH..HHHHHHHCGGCG...........CSSCHHHHHHHHHCCHCCCCSTHHHCC CS
   Adaptin_N 193 lvrrLcnll............teldpwlqvkiiklltrlarqepeerskkellesllnllq...........ssnnaVlletvnlivelapknelivla 268
                  +++L+ ++            +++ pwlqv + ++l ++ ++ ++e+ k+ l++ l   l+           ++ na+l+ +++l++ ++++ +l++++
  EPX72307.1 224 AIHKLKLIVsgrgyssgyiyySVPCPWLQVNLCRILLICHEEVTDETTKRTLINVLDRMLSifkdykdnkhlNVINAILFDAIKLAFAVDDSGSLYQKC 322
                 ******999******************************9999999999999999999999************************************** PP

                 HHCHHHHHHSSCCTCHHHHHCHHHHHHHHX..XTTTT.TTTCCCCSXXTTSXHHHHHHHHHHHCCCXXTTTHHHHHHHHHHHTTSSXXHHHHHHHHHHH CS
   Adaptin_N 269 vnaLvrllsskdenlryvaLrtllkivkke..pkavq.hldlkifllktdddvsirlkaldlllklvdesNvkeivkeLkkyvkevadedfksklvkaI 364
                 +++L++++s+k++n+ry+a +t + + +     ++++ h+dl++ +l+  +dvsir+k l+ll+ ++d++N k++v+eL+ y+  + d    ++l++++
  EPX72307.1 323 MKCLGEMISNKEPNVRYLAFDTTAYLISCGhsLPSLKtHKDLILSSLR-YKDVSIRKKSLELLYMMCDSENSKTMVNELLIYL-PYLDSVSQEDLISKV 419
                 **********************7777654324789999**********.9*********************************.66688899******* PP

                 HHHHHHSCCHHHHHHHHHHHHHTTXXHHHHHHHHHHHHHHHHHSTTTSTTCHHHHCCTCCG.XXSHHHHHHHHHHHHHTTTTXTT.....HHHHHHCTT CS
   Adaptin_N 365 grlaekfatdaewvldvllellslsgesvkdeivevirdliqkvpelheeiiekLaellek.ieseearaaaiWllGeygelvsnte..sasdllrsla 460
                 ++l+e +a+d++w++dv l+ll+ +g+sv+d++++++ ++i+++++ +++++++L++ll++  ++  + ++  ++lGeyg l+ n+    + +++ +++
  EPX72307.1 420 ASLTEIYADDYKWYVDVNLQLLRVAGKSVNDDVWHQLVRVIVNNESIQQYAVRNLFKLLQSdSTHDSLTRSGCYILGEYGYLIANEPgsGPLQQFITVY 518
                 *************************************************************9***********************44467999****** PP

                 TTTTTSXHHHHHHHHHHHHHHHHCXGCC.THXHHHHHHHHHHHXXSHHHHHHHHHHHHHHCC CS
   Adaptin_N 461 ekfvlesekvklqiltalvKlyltspdketqekliqlvlslatssdlevrdRaveylqllss 522
                 +k+++ s+ +   +ltal+Kl++++pd    +++  ++++++ s++ ev++Ra+eylqll +
  EPX72307.1 519 KKLHTSSVGTSVLLLTALLKLSNLQPD--LHKRVAAVFKRYSVSLNTEVQQRACEYLQLLTL 578
                 **************************6..677***************************976 PP

>> Alpha_adaptin_C  Alpha adaptin AP2, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       4.3   1.5e+04      78     102 ..      87     112 ..      78     116 .. 0.64
   2 !  116.2   0.0   2.2e-37   7.9e-34       1     111 [.     747     855 ..     747     857 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 4.3
  Alpha_adaptin_C  78 gkvgcL.lrlepNkqakmvrltiRat 102
                      +++g L + l  N+++ ++rl i + 
       EPX72307.1  87 KQIGYLaVALLLNENHDLIRLVINSI 112
                      45555523456677778999988765 PP

  == domain 2  score: 116.2 bits;  conditional E-value: 2.2e-37
  Alpha_adaptin_C   1 FleptelssedFfkrWkqlggapreaqkifklkaaekeideetvrkvleGfrlavlenvdpnpenivgagvlhtsesgkvgcLlrlepNkqakm 94 
                      Fl pt+++s  Ff+rW  +g  +reaq  f+l+  ++++de+++ k+++G+++++++++d n +nivgag+l+ + ++++gcLlrlepN+q+ m
       EPX72307.1 747 FLRPTSFDSSTFFQRWGLIG-VEREAQLAFGLNGINSRLDERRLMKIVTGLHWGICSGIDTNVSNIVGAGILQLN-AQNIGCLLRLEPNYQNDM 838
                      899****************6.899***************************************************.99**************** PP

  Alpha_adaptin_C  95 vrltiRatkeavpktll 111
                      +rl+iR+t+++v+++l+
       EPX72307.1 839 IRLSIRSTNTTVANVLA 855
                      **************997 PP

>> Alpha_adaptinC2  Adaptin C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.0   2.1e-08   7.5e-05       2      98 ..     639     731 ..     638     741 .. 0.82
   2 ?    0.3   0.1      0.23   8.2e+02      14      36 ..     827     849 ..     816     859 .. 0.70

  Alignments for each domain:
  == domain 1  score: 23.0 bits;  conditional E-value: 2.1e-08
                      EEEEEEETTEEEEEEEEETTSTTEEEEEEEEEE-SSS-EEEEEEEEEEB.TTCEEEEEEES-S-B-TTCEEEEEEEEEEESCTTS-EEEEEEEE CS
  Alpha_adaptinC2   2 evvlyekddlqIgfkfekperpgqiritlsftNkssqpisnfsfqaavp.kslklqlqppsstvlppnpggqitqvllienpskkplrmrlris 94 
                      +++ly ++++q+g  +e+  r+ q+++ l+f+N+ +++ ++fs ++  +  ++k+  +  ++    p    q +q +++++  +   ++ +r+s
       EPX72307.1 639 KGILYRDSQVQVGALVEF--RDLQVCLSLYFENRKTETYTSFSSTLLRTfPNFKVDSSFTDTIFS-P--DKQLQQRFSVDRLDELFDPPIIRVS 727
                      689***************..*************************98865555555544444444.4..99********999999999999999 PP

                      EECT CS
  Alpha_adaptinC2  95 ykvg 98 
                      ++ g
       EPX72307.1 728 FLAG 731
                      9833 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.23
                      EEEEEETTSTTEEEEEEEEEE-S CS
  Alpha_adaptinC2  14 gfkfekperpgqiritlsftNks 36 
                       +++e++ ++++ir+ ++ tN++
       EPX72307.1 827 LLRLEPNYQNDMIRLSIRSTNTT 849
                      44444466888999999999998 PP

>> IFN-gamma  Interferon gamma
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       1.6   5.9e+03      62      75 ..     282     295 ..     259     311 .. 0.69
   2 ?   12.5   0.1   2.8e-05       0.1      96     136 ..     448     488 ..     412     490 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 1.6
   IFN-gamma  62 YfklFeklkdnqvi 75 
                  + +F+ +kdn+ +
  EPX72307.1 282 MLSIFKDYKDNKHL 295
                 56677788887765 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 2.8e-05
   IFN-gamma  96 sklddFkklikisvndlkvqrkaiseLikvlndLspksklr 136
                  + d +++l+++ vn++++q+ a+++L+k l++ s + +l+
  EPX72307.1 448 VNDDVWHQLVRVIVNNESIQQYAVRNLFKLLQSDSTHDSLT 488
                 4678899************************9988877765 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.2       0.1   3.6e+02       8      50 ..     125     166 ..     123     168 .. 0.72
   2 ?    6.5   0.0    0.0033        12      25      48 ..     318     341 ..     299     344 .. 0.80
   3 ?   -3.0   0.0       3.1   1.1e+04      26      41 ..     467     482 ..     460     484 .. 0.69
   4 ?   -2.8   0.0       2.8     1e+04       7      26 ..     820     839 ..     818     841 .. 0.82

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.1
     HEAT_EZ   8 awaLGr.laggepellqplvpeilpaLlalLnddsdeVRaaAag 50 
                 a+aL + + +g++el++ + pei  +L+++    +  VR++Aa 
  EPX72307.1 125 ALALHAvANFGGRELCEAVYPEIQQLLMSAA--TENIVRQKAAL 166
                 4555224788899999988888888888777..77788888885 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0033
     HEAT_EZ  25 lvpeilpaLlalLnddsdeVRaaA 48 
                 l ++ +++L+ + ++++++VR+ A
  EPX72307.1 318 LYQKCMKCLGEMISNKEPNVRYLA 341
                 44569*****************98 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 3.1
     HEAT_EZ  26 vpeilpaLlalLndds 41 
                 ++ +++ L +lL++ds
  EPX72307.1 467 QQYAVRNLFKLLQSDS 482
                 4566777777777775 PP

  == domain 4  score: -2.8 bits;  conditional E-value: 2.8
     HEAT_EZ   7 AawaLGrlaggepellqplv 26 
                 +a ++G+l+  ep+++++++
  EPX72307.1 820 NAQNIGCLLRLEPNYQNDMI 839
                 68899999999999998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (870 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       564  (0.0314574); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.66u 0.32s 00:00:00.98 Elapsed: 00:00:00.45
# Mc/sec: 5830.57
//
Query:       EPX72308.1  [L=676]
Description: RINT1 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.3e-102  344.3  24.1   1.7e-102  343.9  24.1    1.1  1  RINT1_TIP1  RINT-1 / TIP-1 family


Domain annotation for each model (and alignments):
>> RINT1_TIP1  RINT-1 / TIP-1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  343.9  24.1  9.3e-107  1.7e-102       1     499 []     199     670 ..     199     670 .. 0.93

  Alignments for each domain:
  == domain 1  score: 343.9 bits;  conditional E-value: 9.3e-107
  RINT1_TIP1   1 LplevlvkplekrFrYHFsgdkqTnklskpewflefilklleknldflrenvqpilakkfrekidavsefitaLlplvreKvasvleevlsdpalLshl 99 
                 L lev+v+p+ ++FrYHF++++qTn +skpewf+e++lk++++ + f+ ++ ++     + ++++ +s fi +L++lv+eK+++++  + +d  +L+hl
  EPX72308.1 199 LFLEVFVEPYANQFRYHFMSKRQTNLISKPEWFYEYLLKTFRSLRGFFVNLKKCE----AVSSYSLFSVFILMLNDLVKEKLSHTA--IFDD--YLVHL 289
                 679*********************************************9888883....34456788******************8..6788..***** PP

  RINT1_TIP1 100 isellsfdkeLrekykYdaeekwkgLtselLdqekvfekWlevEkefalerfeeIisskdaweidyDsveskktk.ptksavrvvdLLesiteryepls 197
                  +e+l++  +L++ +  d    +++L+ +l++q+ ++ekWl++E + ++e++++I  s+daw+++ D++++ ++  ptk++vr++d++es++ ++  l+
  EPX72308.1 290 THETLQYTVHLKQYFGSD----HDYLIDFLFCQPFIYEKWLNLESQQMNEKLNDIKFSNDAWDLALDQANDYSFTvPTKTTVRFRDMMESTYATLLLLP 384
                 ******************....99****9*****9*************************************8888*********************** PP

  RINT1_TIP1 198 sfsyklkflsdIqlelldqYherLkssleayesltstvgrtlqge...tkeqqaelegvkglerlckiygsakylenaledwsdevfFieLweelqera 293
                 sf+yk++f++++ql +l+ Y+++L+s++ea+es+    +++l+g+   t++++a      ++er+ck+y+++ +l+++++d++de+++ie+ +++ ++ 
  EPX72308.1 385 SFKYKVNFFEKVQLGPLQHYLQWLQSFYEAHESS---QSEALPGSlqpTRQNKA-----IEVERMCKLYSNFYLLKEWIDDYEDEEVYIEIGSQYGNK- 474
                 ********************************65...56666666432443433.....68**********************************442. PP

  RINT1_TIP1 294 kkneestavgseeegalFdetiaaydrlrkraeelivealkkeikealkaYvnksqWsslsssses....slsvsselvellnllkrlldfLekalska 388
                              e + F ++ ++ d+l++ +++li++a ++ ++ +++ Y+++++W  ++++  +    ++svsse+ +++n+lk ll+ Le++ls a
  EPX72308.1 475 -------------EHSSFFNIKNEIDSLKTSSFRLILRAAVQMLQPLINDYADIDTWV-IKDQPLNvavaTSSVSSEILDIQNALKVLLKSLENLLSGA 559
                 .............3346****************************************6.6655545699****************************** PP

  RINT1_TIP1 389 lfrriwrelleklqdllweevllrnkFseaGaaQlarDv.ealfalvdryikelklkkLkealkLlnlkvesalsLkealervftd...eakklleelg 483
                 ++r+++++l  ++++++++ ++++++Fs +G  Q+arD+ + l++ ++ y+  l++kkL++ ++Ll+l++++++s k+  ++++++    + +ll+e g
  EPX72308.1 560 SLREVVYQLGIIVEKWFCN-IIMSHQFSLRGGIQFARDImQILLE-FSYYP-LLTFKKLTSFVELLSLDTSKEMSVKDFITAIKDEnylVVDQLLKEKG 655
                 ******************9.*******************666666.9****.8******************************9765544899****** PP

  RINT1_TIP1 484 lekLseseardvLerr 499
                 +e L ++e+++vL+rr
  EPX72308.1 656 IE-LHYAEVLNVLYRR 670
                 **.************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (676 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       956  (0.0533214); expected 358.6 (0.02)
Passed bias filter:                      527  (0.0293937); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.27s 00:00:00.91 Elapsed: 00:00:00.45
# Mc/sec: 4488.70
//
Query:       EPX72309.1  [L=312]
Description: vacuolar membrane palmitoyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-26   93.5   2.3    1.1e-26   93.5   2.3    2.7  2  DHHC      DHHC palmitoyltransferase
  ------ inclusion threshold ------
       0.63   10.1   4.5       0.97    9.5   4.5    1.2  1  zf-CRD    Cysteine rich domain with multizinc binding regions


Domain annotation for each model (and alignments):
>> DHHC  DHHC palmitoyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   5.8      0.12     1e+03     104     125 ..      25      46 ..       4     101 .. 0.44
   2 !   93.5   2.3   1.2e-30   1.1e-26       4     133 ..     111     230 ..     108     231 .. 0.95

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.12
        DHHC 104 llfllllgllllfhlylilrnl 125
                 + +l ++g+++ +++ li+ n 
  EPX72309.1  25 IAILSVTGYVVWVYVALICVNS 46 
                 3333333333333333332221 PP

  == domain 2  score: 93.5 bits;  conditional E-value: 1.2e-30
        DHHC   4 elkfCstcniykpprskHcrvCnrcvlrfDHhCpwlnnciGerNykyFllfllylllllilalvlllialvklveeekkseflavtllkkllsilllvl 102
                  +++C tc+++ p+rs+H+rv  +c+ +fDH+C ++++ i + N+k+F++fl+y +++++++l+ + i++ +  e+++    +          i++l+ 
  EPX72309.1 111 APRICGTCKCWLPDRSHHSRVSMKCIKKFDHYCGFVGKDICFSNHKFFYQFLFYGTIASLFVLISTAIMYARKGEYRSLPGTW----------IFVLIS 199
                 6799*******************************************************************999999998887..........9***** PP

        DHHC 103 sllfllllgllllfhlylilrnlTtieamkk 133
                 s + +l++g ll+++++ +l nl+++e  ++
  EPX72309.1 200 SGFGVLFMGTLLFRQTVFLLLNLNSHEGRNW 230
                 *************************997766 PP

>> zf-CRD  Cysteine rich domain with multizinc binding regions
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   4.5   0.00011      0.97       9      54 ..     101     147 ..      95     164 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00011
      zf-CRD   9 vdgfqCspqtaHltCtaCgqlmPkrpe.agvpqqCelCkrpfCnlYw 54 
                 +  f C p++a + C  C+  +P+r++ ++v ++C    +++C++  
  EPX72309.1 101 APIFVCGPNGAPRICGTCKCWLPDRSHhSRVSMKCIKKFDHYCGFVG 147
                 5679*********************5425666889888888888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (312 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       730  (0.0407162); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2227.64
//
Query:       EPX72310.1  [L=311]
Description: peroxisomal ubiquitin-protein ligase E3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.6e-08   34.0  12.9    4.6e-08   33.3  12.9    1.4  1  zf-RING_2     Ring finger domain
    3.4e-08   33.2   8.1    5.8e-08   32.5   8.1    1.3  1  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
    3.7e-08   33.1  12.5    7.1e-08   32.2  12.5    1.5  1  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
    9.7e-08   32.1   9.3    2.4e-07   30.8   9.3    1.7  1  zf-C3HC4_4    zinc finger of C3HC4-type, RING
    1.4e-07   31.2  12.1    2.5e-07   30.5  12.1    1.4  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
    2.3e-07   30.7   5.1    3.2e-07   30.2   5.1    1.2  1  Pex2_Pex12    Pex2 / Pex12 amino terminal region
    2.8e-06   27.1   7.6    4.4e-06   26.5   7.6    1.3  1  Prok-RING_4   Prokaryotic RING finger family 4
    3.8e-06   26.7   9.2    7.3e-06   25.8   9.2    1.5  1  zf-RING_5     zinc-RING finger domain
    4.2e-06   26.7   9.4    8.8e-06   25.6   9.4    1.6  1  zf-RING_UBOX  RING-type zinc-finger
    7.3e-06   26.2  11.5    1.9e-05   24.8  11.5    1.7  1  zf-rbx1       RING-H2 zinc finger domain
     0.0013   18.8   6.6     0.0034   17.5   6.6    1.7  1  zf-RING_10    zinc RING finger of MSL2
  ------ inclusion threshold ------
      0.023   14.7   4.8      0.048   13.7   4.8    1.5  1  zf-ANAPC11    Anaphase-promoting complex subunit 11 RING-H2 f
      0.034   13.4   0.0      0.052   12.8   0.0    1.2  1  DUF1394       Protein of unknown function (DUF1394)
      0.065   13.4   0.0       0.12   12.6   0.0    1.4  1  U-box         U-box domain
       0.23   11.4   3.1       0.45   10.4   3.1    1.4  1  zf-RING_6     zf-RING of BARD1-type protein
        3.9    7.7   8.3        6.4    7.0   0.4    2.8  2  FYVE          FYVE zinc finger
        6.9    6.5   9.4         16    5.4   9.4    1.6  1  zf-RING_4     RING/Ubox like zinc-binding domain


Domain annotation for each model (and alignments):
>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.3  12.9   4.3e-11   4.6e-08       2      44 .]     260     299 ..     259     299 .. 0.86

  Alignments for each domain:
  == domain 1  score: 33.3 bits;  conditional E-value: 4.3e-11
   zf-RING_2   2 eCpICleelssadsvlllpCgHvfhreClerwlrssstCPlCr 44 
                 +C++C+e +++   +++ +CgH+++++C+ +w +++++CPlCr
  EPX72310.1 260 KCALCMEWMHK--PTVT-ECGHIYCWHCIYNWAKTKPECPLCR 299
                 7****977753..4444.4***********************9 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.5   8.1   5.5e-11   5.8e-08       2      45 ..     258     300 ..     257     303 .. 0.95

  Alignments for each domain:
  == domain 1  score: 32.5 bits;  conditional E-value: 5.5e-11
                 GSB-TTTSSSBS-EEETTEEEEEE-HHHHHHHHHTT-B-TTT-- CS
  zf-C3HC4_3   2 deeCviClerprnvvllpCgHlvlCeeCaekllkrkkkCpiCrr 45 
                 +++C +C+e   + ++ +CgH+ +C +C  ++ k k++Cp+Cr+
  EPX72310.1 258 SRKCALCMEWMHKPTVTECGHI-YCWHCIYNWAKTKPECPLCRS 300
                 579*******************.********************7 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.2  12.5   6.7e-11   7.1e-08       1      40 []     260     298 ..     260     298 .. 0.97

  Alignments for each domain:
  == domain 1  score: 32.2 bits;  conditional E-value: 6.7e-11
  zf-C3HC4_2   1 kCpiCldmlkdpsvvtpCgHvfCqkCilrsLeekneCPlC 40 
                 kC++C++ + +p +vt+CgH +C  Ci  + + k eCPlC
  EPX72310.1 260 KCALCMEWMHKP-TVTECGHIYCWHCIYNWAKTKPECPLC 298
                 7***********.****************999999***** PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   9.3   2.2e-10   2.4e-07       1      42 []     261     298 ..     261     301 .. 0.94

  Alignments for each domain:
  == domain 1  score: 30.8 bits;  conditional E-value: 2.2e-10
  zf-C3HC4_4   1 CPiCldYLekPvsleCGhsfClsCisslqkepdgeqllCplC 42 
                 C  C+++++kP+  eCGh++C +Ci+++ k + +    CplC
  EPX72310.1 261 CALCMEWMHKPTVTECGHIYCWHCIYNWAKTKPE----CPLC 298
                 99**************************999854....9999 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.5  12.1   2.3e-10   2.5e-07       1      41 []     261     298 ..     261     298 .. 0.98

  Alignments for each domain:
  == domain 1  score: 30.5 bits;  conditional E-value: 2.3e-10
                 -TTT-S--SS-E.E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepnelleCkHsfCskCirkilksrkkvkCPlC 41 
                 C++C+e++ +p+ ++eC+H +C +Ci ++ k  +k +CPlC
  EPX72310.1 261 CALCMEWMHKPT-VTECGHIYCWHCIYNWAK--TKPECPLC 298
                 ************.******************..9999**** PP

>> Pex2_Pex12  Pex2 / Pex12 amino terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   5.1     3e-10   3.2e-07       6     187 ..      24     202 ..      19     226 .. 0.78

  Alignments for each domain:
  == domain 1  score: 30.2 bits;  conditional E-value: 3e-10
  Pex2_Pex12   6 sllkpalryilrllagqrfp..ilnyfdEikllldlllelltlksgngTfgeefygLkrvssselkkrrllskrqrllsllllvlipYlkekldely.. 100
                 + lk ++   ++ l   r++   +  ++ +++l+d+l++l  + +  g++g e   +  v  +++++ ++ s +  +  ++l+ +  Yl   + ++   
  EPX72310.1  24 QFLKGQIETTFKTLVLPRPFrnSVVPQESFYVLADFLYQLSCVGR--GSLGNEVSKVLLV--KNTDRLERASPKLQIYEVFLNSGFQYLILLAKKWSqk 118
                 56777888888888777777776777999999********99986..9************..8888888888888899999999999987666666643 PP

  Pex2_Pex12 101 ...sarerysaealsdearnsreslkkrlkrlllklypfiealyellnlvlqllYL.sgkyysllkrllgiryvrlnpadqrrnarrpsye 187
                    +++  +s+ ++++++   +++l +r+  +++k++p+++ ++ +++l   l+++ +    +l++ +lg++y+++  +++    + ++ +
  EPX72310.1 119 ayrRTNTIQSPHHDHPGNLVIKNELVNRIYLFFKKWMPALSRIFSIIRL---LFFInKHHCRTLSQLFLGLHYISIDTSEK----SFTKNK 202
                 3555555555555555**********************99998888887...788878888***************99988....333333 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   7.6   4.2e-09   4.4e-06       1      39 [.     261     301 ..     261     308 .. 0.89

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 4.2e-09
  Prok-RING_4   1 CvlCgeqekkailepCgHlvCkeCfdskdls..sCPlCqrr 39 
                  C lC e  +k+ +  CgH+ C +C  ++  +   CPlC++ 
   EPX72310.1 261 CALCMEWMHKPTVTECGHIYCWHCIYNWAKTkpECPLCRSF 301
                  9************************999666689****975 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   9.2     7e-09   7.3e-06       1      43 [.     260     299 ..     260     300 .. 0.94

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 7e-09
   zf-RING_5   1 hCnkCfeklskeekfyltsCgHifCekClkkllekeavCpiCr 43 
                 +C  C+e +   +k+ +t+CgHi+C++C+ +  + + +Cp+Cr
  EPX72310.1 260 KCALCMEWM---HKPTVTECGHIYCWHCIYNWAKTKPECPLCR 299
                 588899999...9*****************************9 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   9.4   8.4e-09   8.8e-06       1      39 []     261     296 ..     261     299 .. 0.92

  Alignments for each domain:
  == domain 1  score: 25.6 bits;  conditional E-value: 8.4e-09
  zf-RING_UBOX   1 CpIClelftdPlvlpCGHtFCreClwelskslegafkCP 39 
                   C  C+e +++P+v++CGH++C++C+    ++ +++  CP
    EPX72310.1 261 CALCMEWMHKPTVTECGHIYCWHCI---YNWAKTKPECP 296
                   99*********6689**********...78888888888 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8  11.5   1.8e-08   1.9e-05      27      55 .]     271     299 ..     256     299 .. 0.81

  Alignments for each domain:
  == domain 1  score: 24.8 bits;  conditional E-value: 1.8e-08
     zf-rbx1  27 vvlGeCgHaFHlhCiskWlktrkvCPlcr 55 
                 +++ eCgH +  hCi +W kt+ +CPlcr
  EPX72310.1 271 PTVTECGHIYCWHCIYNWAKTKPECPLCR 299
                 5566************************8 PP

>> zf-RING_10  zinc RING finger of MSL2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   6.6   3.2e-06    0.0034       3      47 ..     261     302 ..     259     306 .. 0.86

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 3.2e-06
  zf-RING_10   3 CvvCckLLvdPlepkekeCqHyvCrlCvgkkkklkpsCsqCkdye 47 
                 C+ C + ++   +p+ +eC+H  C  C+ +  k kp+C+ C+++ 
  EPX72310.1 261 CALCMEWMH---KPTVTECGHIYCWHCIYNWAKTKPECPLCRSFA 302
                 777777665...56778*************************986 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   4.8   4.5e-05     0.048      50      79 ..     274     300 ..     257     304 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 4.5e-05
                 BTTS-EEEHHHHHHHHHHHSTSSB-TTTSS CS
  zf-ANAPC11  50 Gkckhnfhlhcilkwletetskglcpmcrq 79 
                  +c h++  hci++w +t   k  cp+cr 
  EPX72310.1 274 TECGHIYCWHCIYNWAKT---KPECPLCRS 300
                 68*************875...789****96 PP

>> DUF1394  Protein of unknown function (DUF1394)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   4.9e-05     0.052     142     221 ..     120     197 ..     118     216 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 4.9e-05
     DUF1394 142 YRRtlsrmklkkkeeeeeeevsdelanrmslFyaeatPmlkvlseattkfvsenkelpventtdlLstlakvcrsmlekp 221
                 YRRt +  +  ++++  + ++++el nr+ lF+ + +P l+ +  ++  +   nk+ ++ ++++l+  l  +  ++ ek+
  EPX72310.1 120 YRRTNT-IQSPHHDHPGNLVIKNELVNRIYLFFKKWMPALSRIFSIIRLLFFINKH-HCRTLSQLFLGLHYISIDTSEKS 197
                 899877.445566777778***********************99999888777777.77888888877777777777766 PP

>> U-box  U-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   0.00011      0.12       6      55 ..     260     308 ..     254     310 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00011
                 B-TTT-SB-SSEEEETTTEEEEHHHHHHHHTT.SSB-TTT-SB--GGGSE CS
       U-box   6 ldpitlelmkdPvilpsgvvvdrstiekhllsrdktdPftrepltqdqli 55 
                 ++ + +e m +P+++  g+++  + i ++++  ++ +P+ r++ ++++li
  EPX72310.1 260 KCALCMEWMHKPTVTECGHIYCWHCIYNWAKT-KPECPLCRSFASPSKLI 308
                 59999***************************.***********999997 PP

>> zf-RING_6  zf-RING of BARD1-type protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   3.1   0.00042      0.45       9      48 ..     260     300 ..     256     305 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00042
   zf-RING_6   9 rcsrctdilrepvclggcehifcsncisdcfgs..gcpvcyt 48 
                 +c+ c + + +p  +  c hi+c  ci +   +   cp+c +
  EPX72310.1 260 KCALCMEWMHKPT-VTECGHIYCWHCIYNWAKTkpECPLCRS 300
                 7999******997.578**********987654227999965 PP

>> FYVE  FYVE zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.4     0.006       6.4      21      36 ..     169     184 ..     160     270 .. 0.59
   2 ?   -0.4   6.6       1.3   1.3e+03      27      46 ..     272     291 ..     251     302 .. 0.70

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.006
                 SSS--EE-TTT--EE- CS
        FYVE  21 llrrrhhCrlCGkvvC 36 
                 +++ +hhCr+  +++ 
  EPX72310.1 169 FFINKHHCRTLSQLFL 184
                 6899*****9887776 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 1.3
                 E-TTT--EE-STTS-EEE.E CS
        FYVE  27 hCrlCGkvvCekCssklval 46 
                     CG+++C +C  + +++
  EPX72310.1 272 TVTECGHIYCWHCIYNWAKT 291
                 45579*****9999877655 PP

>> zf-RING_4  RING/Ubox like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   9.4     0.015        16      17      45 ..     273     300 ..     261     301 .. 0.74

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.015
   zf-RING_4  17 pCeCgyqiClfCyhrileeeegrCPaCre 45 
                   eCg+  C+ C  +  + ++  CP Cr+
  EPX72310.1 273 VTECGHIYCWHCIYNWAK-TKPECPLCRS 300
                 459*********888875.699******6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (311 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       589  (0.0328518); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2201.71
//
Query:       EPX72311.1  [L=365]
Description: lipoate-protein ligase A [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.4e-07   29.1   0.2    1.5e-06   28.1   0.2    1.5  1  BPL_LplA_LipB  Biotin/lipoate A/B protein ligase family


Domain annotation for each model (and alignments):
>> BPL_LplA_LipB  Biotin/lipoate A/B protein ligase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.1   0.2   8.4e-11   1.5e-06      14     130 ..      70     171 ..      59     172 .. 0.82

  Alignments for each domain:
  == domain 1  score: 28.1 bits;  conditional E-value: 8.4e-11
                    ..GCGGG--TT-EEEEEEESS-B-B--B-TTSEEEEEEEEESS...-CCGTHHH.HHHHHHHHHHHH......HHTT-TTEEEETTTEEEE..TTE CS
  BPL_LplA_LipB  14 eslnsselesgglvvvrrqtgGrnvwhspkgeltyslllspeqktfqnrvlely.vsllvlavlealgyrdskpgiegipvfikwpnDlyv..ngr 106
                     + n ++  s ++ ++rr +gG  v+h+  g+++ysll++   ++f+     +    +l++++le+l          ++ ++   + D+++  +++
     EPX72311.1  70 VEANVRKCRSNLVNIIRRKSGGGTVFHD-LGNVNYSLLTNR--NEFS-----HTkGAELIVKALEKL----------NVEAELNQRHDIVLkdTKQ 147
                    55778888999*****************.***********3..3455.....445789999999999..........444444458899998899* PP

                    EEEEEEEEEEETTS-EEEEEEEEE CS
  BPL_LplA_LipB 107 KlaGiavtstrgktlhhivigvgv 130
                    K++G+a +  +gk  hh++++++ 
     EPX72311.1 148 KISGSAYKISKGKSYHHGTMLLNS 171
                    ********************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (365 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       497  (0.0277205); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 2873.86
//
Query:       EPX72312.1  [L=311]
Description: TatD protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-56  190.9   0.0    3.1e-56  190.6   0.0    1.1  1  TatD_DNase  TatD related DNase


Domain annotation for each model (and alignments):
>> TatD_DNase  TatD related DNase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  190.6   0.0   1.7e-60   3.1e-56      12     254 ..      36     310 ..      29     311 .] 0.90

  Alignments for each domain:
  == domain 1  score: 190.6 bits;  conditional E-value: 1.7e-60
                 CTTTHHHHHHHHHHTTEEEEEEE-SSGGGHHHHHHHHTT.TTTEEEEE---GGGGGC......C.CCHHHHHHHH.HHC.CCTSEEEEEEEEEET-CCC CS
  TatD_DNase  12 feedreeileraeeagvaavvvvgtsskdskavlelakkypnkvyavlGiHPnevde......asedlleelkel.anv.khskvvaiGeiGLDyysre 102
                   +d ++i++ra  +gv++++ +g ++++s+++l+la +y++   +++G+HP++++         ed +++l++l ++  k+ kv+a Ge GLDy +  
  EPX72312.1  36 HIDDFDAIISRAVSKGVQKMMITGDNVVNSREALKLATQYDS-FTCTIGVHPCQAECfnknpnGPEDYINQLESLvHEGkKTGKVAAFGEFGLDYDRLH 133
                 45679************************************9.*********99988778876578888***99985544999************7777 PP

                 CCGHHHHHHHHHHHHHHHHHTTEEEEEEEES-HHHHHHHHHHCG.GCCSEEEETT--S-HHHHHHHHHTTEEEEE-GGGGTTTTHHHHHHHHHS-GGGE CS
  TatD_DNase 103 estkeaqeevFeeqlrlAkelklplviHlrkaeedlleilkeaa.eakakvvlHsfsgsaeeakkflklgyyislsglltfknakelrelvkavpldrl 200
                  +  ++q++ Feeql+lA +++lpl++H+r+a +d+ eil+++  + + k+v+Hsf+g++ee++++++ g+y++++g++ +  + e  e+v+a+pld++
  EPX72312.1 134 YASEDVQKKYFEEQLKLAVKVQLPLFLHSRNAAKDFFEILEKYLpNLPKKGVVHSFTGTIEEMQQCIDHGLYVGVNGCSLK--TPENVEVVRAIPLDKM 230
                 78889**************************************854444****************************9888..66789*********** PP

                 EE---TTSSEE...........................CCCTT.SE--GGGHHHHHHHHHHHHTS-HHHHHHHHHHHHHHHH CS
  TatD_DNase 201 LiETDaPyltp...........................kpyrg.krnepanvayvveklaelkaltleelaeitaeNakrlf 254
                 L+ETDaP+++                                   rnep+n   v+e++a++k+++le+la++++eN+  l+
  EPX72312.1 231 LLETDAPWCEIrpshaghafldsknlfdtckkerfkegCM--VrGRNEPCNTLIVAEAIAKIKGISLEDLADKIWENSISLL 310
                 *********9999999999999999999997776654322..3389*******************************98775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (311 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       598  (0.0333538); expected 358.6 (0.02)
Passed bias filter:                      539  (0.030063); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2375.39
//
Query:       EPX72313.1  [L=463]
Description: glutathione reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-61  208.1   0.0    3.4e-61  207.1   0.0    1.5  2  Pyr_redox_2     Pyridine nucleotide-disulphide oxidoreductase
    8.9e-32  109.6   0.2    2.3e-31  108.3   0.1    1.7  2  Pyr_redox_dim   Pyridine nucleotide-disulphide oxidoreductase
    2.4e-21   76.1   1.0    1.4e-16   60.8   0.0    2.4  2  Pyr_redox       Pyridine nucleotide-disulphide oxidoreductase
    3.8e-10   39.5   0.0    2.3e-06   27.1   0.0    2.1  2  Pyr_redox_3     Pyridine nucleotide-disulphide oxidoreductase
    6.8e-09   35.6   0.1    8.9e-09   35.2   0.1    1.2  1  FAD_oxidored    FAD dependent oxidoreductase
    2.6e-06   27.6   2.4    5.4e-06   26.5   1.4    2.1  2  NAD_binding_8   NAD(P)-binding Rossmann-like domain
    9.1e-06   25.0   1.0    0.00023   20.4   1.1    2.2  2  GIDA            Glucose inhibited division protein A
    1.8e-05   24.0   3.2    6.6e-05   22.2   2.9    1.9  2  FAD_binding_2   FAD binding domain
     0.0001   22.2   0.7      0.012   15.5   0.0    2.7  3  3HCDH_N         3-hydroxyacyl-CoA dehydrogenase, NAD binding 
    0.00029   20.1   0.0    0.00043   19.5   0.0    1.3  1  K_oxygenase     L-lysine 6-monooxygenase (NADPH-requiring)
    0.00047   19.5   0.2       0.11   11.7   0.4    2.4  2  AlaDh_PNT_C     Alanine dehydrogenase/PNT, C-terminal domain
    0.00061   18.6   4.3     0.0024   16.6   0.8    2.9  4  HI0933_like     HI0933-like protein
     0.0022   17.3   0.6     0.0042   16.4   0.6    1.4  1  Thi4            Thi4 family
     0.0037   16.9   2.9     0.0037   16.9   2.9    1.9  2  DAO             FAD dependent oxidoreductase
     0.0048   17.3   0.0       0.55   10.7   0.0    2.4  2  NAD_binding_7   Putative NAD(P)-binding
  ------ inclusion threshold ------
       0.02   14.2   1.0          2    7.7   0.0    2.6  3  2-Hacid_dh_C    D-isomer specific 2-hydroxyacid dehydrogenase
      0.027   13.7   0.4       0.56    9.4   0.5    2.1  2  FAD_binding_3   FAD binding domain
      0.027   13.5   0.5      0.054   12.5   0.5    1.5  1  Lycopene_cycl   Lycopene cyclase protein
      0.084   13.4   0.0        1.9    9.0   0.0    2.3  2  XdhC_C          XdhC Rossmann domain
       0.15   11.3   0.9       0.23   10.7   0.9    1.3  1  Amino_oxidase   Flavin containing amine oxidoreductase
       0.26   10.8   1.3       0.81    9.2   0.1    2.3  3  UDPG_MGDP_dh_N  UDP-glucose/GDP-mannose dehydrogenase family,


Domain annotation for each model (and alignments):
>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  207.1   0.0   3.9e-64   3.4e-61       2     294 .]       9     329 ..       8     329 .. 0.94
   2 ?   -2.8   0.0       3.3   2.9e+03     185     210 ..     421     446 ..     414     450 .. 0.77

  Alignments for each domain:
  == domain 1  score: 207.1 bits;  conditional E-value: 3.9e-64
                  SEEEE--SHHHHHHHHHHHHHTS-EEEEE....TTHCHHHCSHHHHCHHHHHHHHHHHHH.........................HHHHCHHHHCCCC CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxx.........................xxxxxxxxxxxxx RF
  Pyr_redox_2   2 dvvviGgGpAGlaaaltlaqagakvtlve....legtclnggcllskallgvaedaeias.........................evvkklnqgiell 70 
                  d++viGgG +Gla a+++a++gakv+lve    l+gtc+n gc+++k+++++a+    ++                         + +k+ln  +e+ 
   EPX72313.1   9 DYLVIGGGSGGLASARRAAKYGAKVALVEasgrLGGTCVNYGCVPKKIMWNIADLVAKMKtapqqgfpesnigrfdwglikrkrdNYIKRLNGIYERN 106
                  899*************************9999***********************99999************************999999**999999 PP

                  HCCTCEEEEESCEEEEETEEEC......TCEEEEEESEEEE---EEE-BC.TCTTC.TTBEECCSECHHHHHHCCSS-TSEEEEES-SHHHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2  71 lgeevvkidpgkkkvklekkke......gdeekiaydklvlAtGssprdl.gipGvaenvgklvrtldsaealklkllpkrivvvGgGyiGvElAaal 161
                   ++ +v ++ g++ ++  +++       +  +++ ++k+++A G++p  + +ipG+ e++      +ds+  ++l+++pk+++vvG+Gyi++ElA+++
   EPX72313.1 107 VNNDGVLYISGHASFVSPTEVAvdmldgSGVQTFSAKKILIAVGGRPIWPsHIPGA-EYG------IDSDGFFELEEQPKKVAVVGAGYIAIELAGVF 197
                  9988777779**9****9988899**9967789***********************.666......89****************************** PP

                  HHHT-EEEEEESSSSSSTTS-HHHHHHHHHHHHHTTEEEEESC.EEEEEEETTEEEE.EEETTSCEEEESEEEE-S-EEES-HHCS.HCCT-EEEETT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxx RF
  Pyr_redox_2 162 aklgkevtlveardrllraldkelsaaleealekeGvevklgt.svkeidgngekle.vvledgeeidadlvvvavGvrpstelle.eklglelderg 256
                  a lg e++l  +rd++lr +d+ +s+ +++++e+ G++++ ++ ++ +i++ ++  +   +++++++d+d +++avG++p+te+l  +++g+++ + g
   EPX72313.1 198 AALGTETHLFIRRDKFLRRFDPIISDGVMKHFEHLGIHIHKNSsEFRKIEKLPS-SQlRLHSEQSTLDVDSLLWAVGRTPKTEGLRlDRAGVKTLPSG 294
                  ***************************************977515778888887.33368888888******************************** PP

                  EEE--TTSBESSTTEEE-GGGCTECCSS--HHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 257 givvdeflrtnvpgiyaiGDvaggkggpelaqaAvqqG 294
                   +v de++rtnvp++  +GDv+   g++el+++A+++G
   EPX72313.1 295 HVVADEYQRTNVPSVLSLGDVV---GKIELTPVAIAAG 329
                  **********************...**********987 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 3.3
                  HHHHHHHHHHHTTEEEEESCEEEEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 185 lsaaleealekeGvevklgtsvkeid 210
                  ++++  e l+  Gv+vk+g++  ++d
   EPX72313.1 421 VGDFSSEILQGFGVAVKMGATKADFD 446
                  66777788888899999998876665 PP

>> Pyr_redox_dim  Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       6.6   5.6e+03      41      73 ..     162     194 ..     138     202 .. 0.73
   2 !  108.3   0.1   2.7e-34   2.3e-31       1     108 [.     350     461 ..     350     463 .] 0.97

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 6.6
                    HCHTTHTEEEEEEEEETTTTBEEEEEEECTTHH CS
  Pyr_redox_dim  41 alayaetkgfvKlvadaktgkvlGahivGpgag 73 
                    a +  +++gf+ l  + k+  v+Ga  ++ + +
     EPX72313.1 162 AEYGIDSDGFFELEEQPKKVAVVGAGYIAIELA 194
                    566666888888877788888999888876555 PP

  == domain 2  score: 108.3 bits;  conditional E-value: 2.7e-34
                    BEEEEESSSEEEEEES-HHHHHHHHSG..EEEEEEEEECGHHHCHTTH..TEEEEEEEEETTTTBEEEEEEECTTHHHHHHHHHHHHHTTSBHHHH CS
  Pyr_redox_dim   1 iptvvftdpevasvGlteeeAkaagie..ikvgkfpfkangralayae..tkgfvKlvadaktgkvlGahivGpgageliqelavaikagltvedl 92 
                    +p+vvf +pev+++Glte+eA ++++e  ikv++++f+ +++al+++e    ++ Klv+    +kv+G+h+vG+  +e++q++ va+k+g+t++d+
     EPX72313.1 350 VPSVVFAHPEVGTIGLTEQEAIDKYGEnqIKVYNSTFRGLNYALVDEEnkVPTTYKLVCAGPLQKVVGLHMVGDFSSEILQGFGVAVKMGATKADF 445
                    79**********************************************88889******************************************* PP

                    HTSBSSSSSTGGGGHC CS
  Pyr_redox_dim  93 adtihihPtlsealke 108
                    +++++ihPt +e+l++
     EPX72313.1 446 DNCVAIHPTSAEELVT 461
                    *************987 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.5   0.00011      0.09       3      35 ..      11      43 ..       9      48 .. 0.93
   2 !   60.8   0.0   1.7e-19   1.4e-16       1      61 [.     180     240 ..     180     256 .. 0.95

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 0.00011
                EEECSSHHHHHHHHHHHHTTSEEEEEESSSSSS CS
   Pyr_redox  3 vvvGgGyiglElAgalaelgkkVtvversdkll 35
                +v+GgG  gl  A  +a++g+kV +ve+s +l 
  EPX72313.1 11 LVIGGGSGGLASARRAAKYGAKVALVEASGRLG 43
                7****************************9986 PP

  == domain 2  score: 60.8 bits;  conditional E-value: 1.7e-19
                 EEEEECSSHHHHHHHHHHHHTTSEEEEEESSSSSSTTSSHHHHHHHHHHHHHTTEEEECSE CS
   Pyr_redox   1 kvvvvGgGyiglElAgalaelgkkVtvversdkllrllDeeaskilqeklekngievllnt 61 
                 kv+vvG+Gyi++ElAg++a+lg +++++ r+dk+lr +D+ +s+ +++++e++gi+++ n+
  EPX72313.1 180 KVAVVGAGYIAIELAGVFAALGTETHLFIRRDKFLRRFDPIISDGVMKHFEHLGIHIHKNS 240
                 79********************************************************997 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.6   0.00047       0.4       1      39 [.      11      49 ..      11      66 .. 0.87
   2 !   27.1   0.0   2.7e-09   2.3e-06     121     301 ..     138     309 ..     134     313 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00047
  Pyr_redox_3  1 iIiGaGPaGlaaaielkkagledylilEkg.nignsiyry 39
                 ++iG+G  Gla+a  + k g  ++  +E   ++g +  +y
   EPX72313.1 11 LVIGGGSGGLASARRAAKYGA-KVALVEASgRLGGTCVNY 49
                 69*******************.688888765888888887 PP

  == domain 2  score: 27.1 bits;  conditional E-value: 2.7e-09
  Pyr_redox_3 121 etyeAkkviiAtGefdkPnkl.nipGeeklvkhyskvkefhkyagqkvvViGgknSavDaAlelvrkgaeVtvvtrgseiekeesdpsyslkpdienr 217
                  +t++Akk++iA G   +P ++ +ipG+e + + +  + e+ + + +kv+V+G++  a++ A  +++ g e ++++r+++       +  +  p+i + 
   EPX72313.1 138 QTFSAKKILIAVGG--RPIWPsHIPGAE-YGIDSDGFFEL-EEQPKKVAVVGAGYIAIELAGVFAALGTETHLFIRRDK-------FLRRFDPIISDG 224
                  6899*********8..9998647****9.***********.78899******************************985.......455678999998 PP

  Pyr_redox_3 218 leelvkeekikvlfna.evkeikekeeeykvktedgkkvevkddvvlatGykpdlsflkk..slfeldedgrpvlteeteetnvpgl 301
                  + +  ++  i++++n+ e ++i++  ++ +++ ++++++   d  + a+G +p+++ l+   +++++  +g+ v+ +e + tnvp +
   EPX72313.1 225 VMKHFEHLGIHIHKNSsEFRKIEKLPSS-QLRLHSEQSTLDVDSLLWAVGRTPKTEGLRLdrAGVKTLPSGH-VVADEYQRTNVPSV 309
                  8888888559999885379999987655.5554444555566889999*******99776447777756665.56667889999876 PP

>> FAD_oxidored  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.2   0.1     1e-11   8.9e-09       1      44 [.       9      52 ..       9     138 .. 0.91

  Alignments for each domain:
  == domain 1  score: 35.2 bits;  conditional E-value: 1e-11
  FAD_oxidored  1 DvvVvGGgpaGvaAAiaAaraGakvlLveergvlGGlltsglva 44
                  D +V+GGg++G+a A  Aa+ Gakv+Lve +g+lGG+  + +  
    EPX72313.1  9 DYLVIGGGSGGLASARRAAKYGAKVALVEASGRLGGTCVNYGCV 52
                  669*********************************99876654 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   1.4   6.3e-09   5.4e-06       1      36 [.      12      47 ..      12      61 .. 0.95
   2 ?   -1.8   0.0       4.3   3.7e+03       1      25 [.     183     207 ..     183     249 .. 0.55

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 6.3e-09
                   EE--SHHHHHHHHHHHCCTEEEEEE-SSSSSSGGG- CS
  NAD_binding_8  1 IvGaGlsGlvaAylLakagfdvlllekrdrlGGraa 36
                   ++G+G +Gl+ A+++ak+g++v l+e++ rlGG + 
     EPX72313.1 12 VIGGGSGGLASARRAAKYGAKVALVEASGRLGGTCV 47
                   8********************************985 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 4.3
                    EE--SHHHHHHHHHHHCCTEEEEEE CS
  NAD_binding_8   1 IvGaGlsGlvaAylLakagfdvlll 25 
                    +vGaG  +  +A   a  g + +l+
     EPX72313.1 183 VVGAGYIAIELAGVFAALGTETHLF 207
                    6777765554444444444444444 PP

>> GIDA  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   1.1   2.7e-07   0.00023       3      44 ..      11      55 ..       9      70 .. 0.85
   2 ?    2.4   0.0     0.076        65       1      29 [.     180     208 ..     180     253 .. 0.87

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 2.7e-07
                EEE-SSHHHHHHHHHHHHTT--EEEE...ES-GGGTT--SSSSEE CS
        GIDA  3 iViGgGhAGceAAlaaarlGakvlLi...thkldtiaelsCnpsi 44
                 ViGgG  G++ A  aa+ Gakv+L+       +t+++ +C p  
  EPX72313.1 11 LVIGGGSGGLASARRAAKYGAKVALVeasGRLGGTCVNYGCVPKK 55
                7*************************8877778999999999965 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.076
                 CEEEE-SSHHHHHHHHHHHHTT--EEEEE CS
        GIDA   1 dviViGgGhAGceAAlaaarlGakvlLit 29 
                 +v V+G+G   +e A   a lG ++ L+ 
  EPX72313.1 180 KVAVVGAGYIAIELAGVFAALGTETHLFI 208
                 699***********************993 PP

>> FAD_binding_2  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   2.9   7.7e-08   6.6e-05       1      38 [.       9      46 ..       9      48 .. 0.94
   2 ?   -1.2   0.0      0.97   8.3e+02     179     207 ..     129     156 ..     122     165 .. 0.78

  Alignments for each domain:
  == domain 1  score: 22.2 bits;  conditional E-value: 7.7e-08
                   SEEEE--SHHHHHHHHHHHHTTT-EEEEESSSGGGSGG CS
  FAD_binding_2  1 DviViGsGlAGLaAAleaaeaGlkvavvekeqefggat 38
                   D +ViG+G +GLa+A +aa+ G+kva+ve  ++ gg+ 
     EPX72313.1  9 DYLVIGGGSGGLASARRAAKYGAKVALVEASGRLGGTC 46
                   789*****************************999975 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.97
                    EEETTTTCEEEEEESEEEE-----GG... CS
  FAD_binding_2 179 venpesgrevrirakavvlatgGfgrall 207
                    v  +++++ +++ ak++++a gG +  ++
     EPX72313.1 129 VDMLDGSGVQTFSAKKILIAVGGRPI-WP 156
                    4555889999*************995.66 PP

>> 3HCDH_N  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.2     0.036        31       4      31 ..      12      39 ..      10      71 .. 0.93
   2 !   15.5   0.0   1.5e-05     0.012       1      53 [.     180     232 ..     180     263 .. 0.84
   3 ?   -2.1   0.0       3.5     3e+03      97     128 ..     243     274 ..     236     278 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.036
                EE--SCCHHHHHHHHHHTT-EEEEE-S- CS
     3HCDH_N  4 viGaGtmGagiaavfasagleVvlvdis 31
                viG G  G   a  +a+ g +V lv+ s
  EPX72313.1 12 VIGGGSGGLASARRAAKYGAKVALVEAS 39
                9***********************9986 PP

  == domain 2  score: 15.5 bits;  conditional E-value: 1.5e-05
                 EEEEE--SCCHHHHHHHHHHTT-EEEEE-S-HHHHHHHHHHHHHHHHCCTTTT CS
     3HCDH_N   1 kvaviGaGtmGagiaavfasagleVvlvdiseealekalekieksleklvekg 53 
                 kvav+GaG +  ++a vfa+ g e++l+ +++++l++    i++ + k  e+ 
  EPX72313.1 180 KVAVVGAGYIAIELAGVFAALGTETHLFIRRDKFLRRFDPIISDGVMKHFEHL 232
                 79*********************************998888888776666655 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 3.5
                 HHHHHCCS-TTSEEEE--SSS-HHHHCCCSSS CS
     3HCDH_N  97 faelekiakpdailasnTSslsiselaealkr 128
                 f+++ek+ +++  l s+ S+l+++ l  a+ r
  EPX72313.1 243 FRKIEKLPSSQLRLHSEQSTLDVDSLLWAVGR 274
                 89999999999999********9999877655 PP

>> K_oxygenase  L-lysine 6-monooxygenase (NADPH-requiring)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   5.1e-07   0.00043     140     228 ..     134     213 ..     112     253 .. 0.80

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 5.1e-07
  K_oxygenase 140 aegeeeelearnlvlgvGtepkiPevleklegkervvHsseylerkeellakkriaVvGsGqSaaeifedllrrqkkvelklvtrseal 228
                   +g  ++++a++++++vG++p  P+++      e  + s+ + e +   +++k++aVvG+G  a e++   ++  +  e +l++r++++
   EPX72313.1 134 GSG-VQTFSAKKILIAVGGRPIWPSHIPGA---EYGIDSDGFFELE---EQPKKVAVVGAGYIAIELAGVFAALGT--ETHLFIRRDKF 213
                  344.6899******************9975...5689999999887...799**********99998765554444..55566666655 PP

>> AlaDh_PNT_C  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.4   0.00013      0.11      30      59 ..       9      38 ..       2      43 .. 0.88
   2 ?    4.9   0.0     0.016        14      27      69 ..     177     219 ..     174     255 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00013
                 EEEEESTSHHHHHHHHHHHHTT-EEEEEES CS
  AlaDh_PNT_C 30 kvlviGgGvaGlqAiatakglgakVtvlDv 59
                   lviGgG  Gl++++ a++ gakV +++ 
   EPX72313.1  9 DYLVIGGGSGGLASARRAAKYGAKVALVEA 38
                 679**********************98875 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.016
                  ---EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHH CS
  AlaDh_PNT_C  27 epakvlviGgGvaGlqAiatakglgakVtvlDvrparleqles 69 
                  +p kv v+G+G   ++ + + ++lg ++ ++  r + l++++ 
   EPX72313.1 177 QPKKVAVVGAGYIAIELAGVFAALGTETHLFIRRDKFLRRFDP 219
                  688************************9999888888887765 PP

>> HI0933_like  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.8   2.8e-06    0.0024       2      36 ..       9      43 ..       8      47 .. 0.93
   2 ?   -0.9   0.0      0.58   4.9e+02     149     165 ..     136     152 ..     122     158 .. 0.81
   3 ?   -2.9   0.1       2.4     2e+03       2      25 ..     180     203 ..     179     218 .. 0.59
   4 ?    1.2   0.0      0.14   1.2e+02     115     163 ..     225     273 ..     191     278 .. 0.87

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 2.8e-06
                 SEEEE--SHHHHHHHHHHHHTT--EEEE-SSSSS- CS
  HI0933_like  2 dviviGgGaAGlmaAisaakrgkrVlllekakklg 36
                 d +viGgG  Gl  A +aak g++V+l+e+  +lg
   EPX72313.1  9 DYLVIGGGSGGLASARRAAKYGAKVALVEASGRLG 43
                 779**************************998887 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.58
                  TTEEEEESEEEE----S CS
  HI0933_like 149 seeeleadklvlAtGGl 165
                  + ++++a+k+++A+GG 
   EPX72313.1 136 GVQTFSAKKILIAVGGR 152
                  557899*********97 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 2.4
                  SEEEE--SHHHHHHHHHHHHTT-- CS
  HI0933_like   2 dviviGgGaAGlmaAisaakrgkr 25 
                  +v+v+G+G   +  A   a+ g +
   EPX72313.1 180 KVAVVGAGYIAIELAGVFAALGTE 203
                  799****96444444444444444 PP

  == domain 4  score: 1.2 bits;  conditional E-value: 0.14
                  HHHHHHHHT-EEE-S.--EEEEECETTE.EEEEE.TTEEEEESEEEE--- CS
  HI0933_like 115 llkelkeagvklrle.tevksvekeedgkfrvktkseeeleadklvlAtG 163
                   +k+ ++ g++++ + +e +++ek  ++++r++  ++++l  d+l+ A+G
   EPX72313.1 225 VMKHFEHLGIHIHKNsSEFRKIEKLPSSQLRLHS-EQSTLDVDSLLWAVG 273
                  6778889999998652689**************9.99**********998 PP

>> Thi4  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.6   4.9e-06    0.0042      19      63 ..       9      52 ..       4      65 .. 0.86

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 4.9e-06
                EEEEE--SHHHHHHHHHHHHCTTS-EEEEESSSS--TTTTTTSTT CS
        Thi4 19 DvvivGaGssGLtaayylakkpdlkvailersvspGGGawlGGql 63
                D +++G+Gs GL++a+  ak  + kva++e+s  +GG     G +
  EPX72313.1  9 DYLVIGGGSGGLASARRAAKY-GAKVALVEASGRLGGTCVNYGCV 52
                889*****************9.**************988776665 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   2.9   4.4e-06    0.0037       1      36 [.       9      45 ..       9      52 .. 0.92
   2 ?   -2.4   0.3       3.2   2.7e+03       1      10 [.     180     189 ..     180     194 .. 0.87

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 4.4e-06
                EEEEECTSHHHHHHHHHHHHTT..EEEEESSSSTTSSG CS
         DAO  1 dvviiGGGiiGlstAyeLarrg..Vtllekgdiagsga 36
                d ++iGGG  Gl+ A+ +a+ g  V+l+e++ ++g g+
  EPX72313.1  9 DYLVIGGGSGGLASARRAAKYGakVALVEASGRLG-GT 45
                789***************************98888.65 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 3.2
                 EEEEECTSHH CS
         DAO   1 dvviiGGGii 10 
                 +v+++G+G+i
  EPX72313.1 180 KVAVVGAGYI 189
                 59******98 PP

>> NAD_binding_7  Putative NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.0   0.00064      0.55       9      38 ..       9      38 ..       4      86 .. 0.88
   2 ?    4.1   0.0     0.075        64       7      34 ..     178     205 ..     172     264 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00064
  NAD_binding_7  9 kvlvvGgGevAarkvrklleagakvtvvap 38
                     lv+GgG+ ++  +r+ +++gakv +v  
     EPX72313.1  9 DYLVIGGGSGGLASARRAAKYGAKVALVEA 38
                   679***********************9965 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.075
  NAD_binding_7   7 gkkvlvvGgGevAarkvrklleagakvt 34 
                     kkv vvG+G +A + +  +++ g + +
     EPX72313.1 178 PKKVAVVGAGYIAIELAGVFAALGTETH 205
                    699**********988877777666555 PP

>> 2-Hacid_dh_C  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.1     0.025        21      40      70 ..      11      41 ..       6      66 .. 0.84
   2 ?    7.7   0.0    0.0024         2      33      66 ..     175     208 ..     163     219 .. 0.84
   3 ?   -3.5   0.1       6.6   5.7e+03      41      63 ..     415     437 ..     414     450 .. 0.81

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.025
                  EEES-SHHHHHHHHHHHHTT-EEEEESSSHH CS
  2-Hacid_dh_C 40 GiiGlGrIGqavakrlkafgmkviaydrskk 70
                   +iG G+ G a a+r+++ g+kv  ++ s +
    EPX72313.1 11 LVIGGGSGGLASARRAAKYGAKVALVEASGR 41
                  589*********************9988766 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.0024
                   -GTTSEEEEES-SHHHHHHHHHHHHTT-EEEEES CS
  2-Hacid_dh_C  33 elsgktvGiiGlGrIGqavakrlkafgmkviayd 66 
                   e + k+v+++G+G I+ ++a +++a+g +   + 
    EPX72313.1 175 EEQPKKVAVVGAGYIAIELAGVFAALGTETHLFI 208
                   56779**********************9887665 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 6.6
                   EES-SHHHHHHHHHHHHTT-EEE CS
  2-Hacid_dh_C  41 iiGlGrIGqavakrlkafgmkvi 63 
                   ++Gl  +G    ++l++fg+ v 
    EPX72313.1 415 VVGLHMVGDFSSEILQGFGVAVK 437
                   67888888889999999999885 PP

>> FAD_binding_3  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.5   0.00065      0.56       4      32 ..      10      38 ..       7      43 .. 0.92
   2 ?    1.8   0.0      0.13   1.1e+02       3      58 ..     180     234 ..     179     248 .. 0.84

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00065
                   EEEE--SHHHHHHHHHHHHTTHHEEEEES CS
  FAD_binding_3  4 VlIVGaGpaGlmlallLseaGvrvvlvek 32
                    l++G+G  Gl +a+  +++G +v lve 
     EPX72313.1 10 YLVIGGGSGGLASARRAAKYGAKVALVEA 38
                   69*************************97 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.13
                    EEEEE--SHHHHHHHHHHHHTTHHEEEEESSSSSCCSSS--EEEHHHHHHHHHTT- CS
  FAD_binding_3   3 dVlIVGaGpaGlmlallLseaGvrvvlvekrsttvvlpradglnqrtmellrqlGl 58 
                    +V++VGaG   + la + +  G +++l  +r++  + +   ++++  m  +++lG+
     EPX72313.1 180 KVAVVGAGYIAIELAGVFAALGTETHLFIRRDKFLRRFD-PIISDGVMKHFEHLGI 234
                    69**********************999999998887764.4666777777777776 PP

>> Lycopene_cycl  Lycopene cyclase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.5   6.4e-05     0.054       1      35 [.       9      41 ..       9      52 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 6.4e-05
  Lycopene_cycl  1 DvvviGaGpAglslAarlteakpglkvvlieasps 35
                   D +viG+G  gl+ A r   ak+g kv l+eas  
     EPX72313.1  9 DYLVIGGGSGGLASARRA--AKYGAKVALVEASGR 41
                   779***************..************976 PP

>> XdhC_C  XdhC Rossmann domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0      0.32   2.8e+02       2      30 ..      11      39 ..      10      77 .. 0.89
   2 ?    9.0   0.0    0.0022       1.9       1      35 [.     181     225 ..     181     281 .. 0.72

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.32
                EEE--STTHHHHHHHHHHHTEEEEEEES- CS
      XdhC_C  2 vifGaghvaqalarlaaalgfrvtvvdpr 30
                +++G+g  + a ar aa+ g +v +v++ 
  EPX72313.1 11 LVIGGGSGGLASARRAAKYGAKVALVEAS 39
                699*********************99876 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0022
                 EEEE--STTHHHHHHHHHHHTEEEEEEES-GGGG..........- CS
      XdhC_C   1 lvifGaghvaqalarlaaalgfrvtvvdpreefa..........t 35 
                 ++++Gag +a +la + aalg +++++  r++f            
  EPX72313.1 181 VAVVGAGYIAIELAGVFAALGTETHLFIRRDKFLrrfdpiisdgV 225
                 579**************************9988745555554440 PP

>> Amino_oxidase  Flavin containing amine oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.9   0.00027      0.23       3      30 ..      19      46 ..      17      49 .. 0.93

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00027
                   HHHHHHHHHHTTEEEEEEESSSSSBTTS CS
  Amino_oxidase  3 GLaaArqLlsaGfdVtvlEardrvGGRi 30
                   GLa Ar+ +  G +V ++Ea++r+GG +
     EPX72313.1 19 GLASARRAAKYGAKVALVEASGRLGGTC 46
                   9*************************76 PP

>> UDPG_MGDP_dh_N  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1       1.4   1.2e+03       5      31 ..      12      38 ..      10      41 .. 0.91
   2 ?    9.2   0.1   0.00095      0.81       2      25 ..     180     203 ..     179     211 .. 0.91
   3 ?   -2.5   0.0       3.9   3.3e+03      32      59 ..     367     394 ..     350     404 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1.4
                    EE--STTHHHHHHHHHHCTSEEEEE-S CS
  UDPG_MGDP_dh_N  5 viGlGYvGlvtaavlaeighevigvDi 31
                    viG G  Gl +a   a+ g +v +v  
      EPX72313.1 12 VIGGGSGGLASARRAAKYGAKVALVEA 38
                    89********************99975 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00095
                     EEEEE--STTHHHHHHHHHHCTSE CS
  UDPG_MGDP_dh_N   2 kisviGlGYvGlvtaavlaeighe 25 
                     k++v+G+GY+ +  a v+a++g e
      EPX72313.1 180 KVAVVGAGYIAIELAGVFAALGTE 203
                     89******************9975 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 3.9
                     -HHHHHHHCTTS-SS--TTHHHHHHHHC CS
  UDPG_MGDP_dh_N  32 deekvdklnsgkipiyepgLeelvkkav 59 
                     ++e++dk  +++i++y+   + l  + v
      EPX72313.1 367 EQEAIDKYGENQIKVYNSTFRGLNYALV 394
                     6788999999999999887777666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (463 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       397  (0.0221429); expected 358.6 (0.02)
Passed bias filter:                      378  (0.0210832); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                        21  (0.00117129); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              21  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 3186.09
//
Query:       EPX72314.1  [L=331]
Description: phosphoprotein phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.5e-35  119.3   0.1    1.4e-34  118.7   0.1    1.3  1  DSPc           Dual specificity phosphatase, catalytic domain
    0.00043   19.9   0.0    0.00069   19.2   0.0    1.3  1  Y_phosphatase  Protein-tyrosine phosphatase
     0.0098   16.0   0.1        1.1    9.4   0.0    2.2  2  ApoLp-III      Apolipophorin-III precursor (apoLp-III)
  ------ inclusion threshold ------
      0.019   15.3   0.1      0.047   14.0   0.1    1.6  1  Init_tRNA_PT   Rit1 DUSP-like domain
      0.026   13.5   0.3      0.036   13.0   0.3    1.2  1  TRAPPC-Trs85   ER-Golgi trafficking TRAPP I complex 85 kDa su
      0.027   14.2   0.0        0.1   12.3   0.0    1.9  2  CDKN3          Cyclin-dependent kinase inhibitor 3 (CDKN3)
        1.5    8.8   6.3        2.9    7.9   0.2    3.2  3  zinc_ribbon_4  zinc-ribbon domain


Domain annotation for each model (and alignments):
>> DSPc  Dual specificity phosphatase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.7   0.1   5.6e-38   1.4e-34       1     132 [.      57     186 ..      57     187 .. 0.97

  Alignments for each domain:
  == domain 1  score: 118.7 bits;  conditional E-value: 5.6e-38
                 EEEEECCHHC.HHHHHHHTCSEEEEESSSSSECECCTTTTSEEEEECCESSTTSCCGGGHHHHHHHHHHHHHTT-EEEEEESSSSSHHHHHHHHHHHHH CS
        DSPc   1 lylgskstas.lallsklgitlvinvtkevpnanalkkseieklripvedehetkiskyleeavefidkakqkgkkvlVHCqaGisRSatliiaYlmkt 98 
                 +y+ s+++as  +ll+ ++i++v+ +++ +p+   l+  + ++++ip+ed ++++i ++++++++fid+a  ++ +vlVHC aG+sRS tl+ aYlmk+
  EPX72314.1  57 IYISSWKAASnNDLLEMNNIKYVLSAMSIDPK---LNLPSDQHIWIPIEDGSSQNILQHISKTIKFIDEAVASNSRVLVHCFAGVSRSVTLVSAYLMKK 152
                 7**************************99998...6779************************************************************ PP

                 HTSCHHHHHHHHHHHSTT-SSTHHHHHHHHHHHH CS
        DSPc  99 knlslneayeflkerrpaispnagfirqLleyek 132
                 + ++ ++a++++  +r++ispn++f++qL  y++
  EPX72314.1 153 NDWDPEKALNYISTKRSNISPNPSFLKQLQVYYE 186
                 *****************************98875 PP

>> Y_phosphatase  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   2.7e-07   0.00069     153     193 ..     111     150 ..      93     188 .. 0.78

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 2.7e-07
                    HHHHHHHHHHHHHHSTTSS-EEEECSSSSHHHHHHHHHHHH CS
  Y_phosphatase 153 ksllklirkvekskeaksgpvvVhCsaGvgRtgtfvaldil 193
                    +++ k+i+ + +   a+++ v+VhC aGv+R+ t+v++ ++
     EPX72314.1 111 QHISKTIKFIDEAV-ASNSRVLVHCFAGVSRSVTLVSAYLM 150
                    34446666666666.677*****************998665 PP

>> ApoLp-III  Apolipophorin-III precursor (apoLp-III)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.013        34      48      87 ..       2      40 ..       1      46 [. 0.87
   2 !    9.4   0.0   0.00042       1.1      10      76 ..      84     151 ..      81     168 .. 0.81

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.013
   ApoLp-III 48 elkkksdeleealkevkkkieetadklseenPevkkkaqe 87
                e+ +  ++ +++++e+ + ++e+ ++l++ +  ++k++++
  EPX72314.1  2 EVHQDENTWKPVFSELHSSVQEAEATLRN-DGSMEKAIKQ 40
                567778899*******************9.8888888876 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00042
   ApoLp-III  10 svkkqlnlpsqeevvetiKens.enlvdqlkqvikslqeelkkksdeleealkevkkkieetadklse 76 
                 s+  +lnlps++ +   i ++s +n+++ ++++ik ++e+++ +s  l   +  v   ++ + + l +
  EPX72314.1  84 SIDPKLNLPSDQHIWIPIEDGSsQNILQHISKTIKFIDEAVASNSRVLVHCFAGVSRSVTLVSAYLMK 151
                 67889**************98625799****************9988888777777776666666555 PP

>> Init_tRNA_PT  Rit1 DUSP-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.1   1.8e-05     0.047      13      66 ..     105     156 ..      94     184 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1.8e-05
  Init_tRNA_PT  13 gsknLrtalpkivdfvrkrlsedkkkkilvacetGkdlsvgvaLailcklfdda 66 
                   +s+n+ ++++k ++f+ + +++++  ++lv+c  G + sv ++ a l+k  d +
    EPX72314.1 105 SSQNILQHISKTIKFIDEAVASNS--RVLVHCFAGVSRSVTLVSAYLMKKNDWD 156
                   5889999**************999..9******************999987544 PP

>> TRAPPC-Trs85  ER-Golgi trafficking TRAPP I complex 85 kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.3   1.4e-05     0.036      86     206 ..      46     184 ..       3     193 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.4e-05
  TRAPPC-Trs85  86 sadsaeeadeseplsaaeeaaslsqsesssleedlssestshgalLslsdvdsirafirelvvqslipfmerkirqlneqiaqsRkgltgkLfsask 182
                   s d+ ++ de+ + s+ ++a+     e+++++  ls++s     +L l  +++i   i++  +q+++ ++ ++i++ +e +a++ + l   +  +s+
    EPX72314.1  46 SLDQISKIDENIYISSWKAASNNDLLEMNNIKYVLSAMSI--DPKLNLPSDQHIWIPIEDGSSQNILQHISKTIKFIDEAVASNSRVLVHCFAGVSR 140
                   4444444445555555455555555555555433345544..666777778899999**************************************** PP

  TRAPPC-Trs85 183 klf....................gsskpssssasssynaasayY 206
                    ++                     s k s+ s ++s+ ++ ++Y
    EPX72314.1 141 SVTlvsaylmkkndwdpekalnyISTKRSNISPNPSFLKQLQVY 184
                   99999999998888888888877455566666666665555555 PP

>> CDKN3  Cyclin-dependent kinase inhibitor 3 (CDKN3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   3.9e-05       0.1     107     157 ..     100     151 ..      87     161 .. 0.76
   2 ?   -2.0   0.0      0.97   2.5e+03      79     100 ..     186     207 ..     176     213 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 3.9e-05
                 ---TTS---HHH.HHHHHHHHHHHHHTT--EEEE-SSSSSHHHHHHHHHHHH CS
       CDKN3 107 piadggtpdias.cleimeelatclknyrktlihcygglgrsclvaacllly 157
                 pi dg + +i     + ++ +  ++  + + l+hc+ g+ rs+ + ++ l+ 
  EPX72314.1 100 PIEDGSSQNILQhISKTIKFIDEAVASNSRVLVHCFAGVSRSVTLVSAYLMK 151
                 89999998886515567777888899999*************8766655554 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.97
                 S-HHHHHHTT-TTHHHHHHHTT CS
       CDKN3  79 ctrgelskyrvpnlldlyqqyg 100
                   r els+ + p  l l+++yg
  EPX72314.1 186 ECRFELSQQQRPYRLWLFHKYG 207
                 3467777777777777777776 PP

>> zinc_ribbon_4  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.2    0.0011       2.9      20      32 ..     229     241 ..     224     244 .. 0.82
   2 ?   -1.3   0.0      0.87   2.2e+03      23      30 ..     259     266 ..     256     266 .. 0.77
   3 ?    2.4   0.4     0.057   1.5e+02       3      11 ..     288     296 ..     287     297 .. 0.72

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0011
  zinc_ribbon_4  20 pakgvkvrCskCg 32 
                    +a+ +++rC+kC+
     EPX72314.1 229 RAGQTEIRCKKCR 241
                    677889******8 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.87
  zinc_ribbon_4  23 gvkvrCsk 30 
                     ++vrC++
     EPX72314.1 259 PQNVRCTH 266
                    57899985 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.057
  zinc_ribbon_4   3 itCpsCkak 11 
                    + Cp+C++k
     EPX72314.1 288 FDCPKCSSK 296
                    569999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       870  (0.0485247); expected 358.6 (0.02)
Passed bias filter:                      620  (0.0345808); expected 358.6 (0.02)
Passed Vit filter:                        67  (0.00373696); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2440.95
//
Query:       EPX72315.1  [L=402]
Description: DNAJB12 protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.6e-24   85.0   1.0    3.6e-24   85.0   1.0    2.0  2  DUF1977    Domain of unknown function (DUF1977)
    6.2e-24   83.9   3.3    6.2e-24   83.9   3.3    2.2  2  DnaJ       DnaJ domain
  ------ inclusion threshold ------
       0.05   14.2   0.7       0.05   14.2   0.7    2.7  2  CBFB_NFYA  CCAAT-binding transcription factor (CBF-B/NF-YA) s
      0.097   12.8   0.0        0.3   11.3   0.0    1.9  1  TPR_2      Tetratricopeptide repeat
       0.36   11.2   4.3       0.35   11.2   1.7    2.1  2  DUF5638    Family of unknown function (DUF5638)


Domain annotation for each model (and alignments):
>> DUF1977  Domain of unknown function (DUF1977)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.2       1.2   4.4e+03      57      68 ..     115     126 ..      83     150 .. 0.56
   2 !   85.0   1.0     1e-27   3.6e-24       7     104 ..     291     388 ..     282     389 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 1.2
     DUF1977  57 vqnlraeCerek 68 
                 + nl+++C+  +
  EPX72315.1 115 ILNLKKDCKDIE 126
                 335666665544 PP

  == domain 2  score: 85.0 bits;  conditional E-value: 1e-27
     DUF1977   7 PsysfeksskytverttsnlkvpYyVnpaevskysskklrklekeveeeyvqnlraeCerekeqkerlieraqgwfgtdeeklekaekmklpsCeeLk 104
                   ysf +++ky+ ++ ++++kvp+yVnp++ ++ ss++  +l +++e++y ++++aeC +e+e+ke++i+++ gwf+ d ekl +a+++ lp+C+e++
  EPX72315.1 291 AGYSFVPTEKYSAQYISPKYKVPFYVNPKQYNSLSSRDSLRLANQIEQQYAERVHAECIKEREYKEDQIRKSYGWFFPDAEKLSRAKEISLPHCDEFS 388
                 679*********************************9**********************************************************987 PP

>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.9   3.3   1.7e-27   6.2e-24       1      63 []     111     172 ..     111     172 .. 0.99
   2 ?   -1.9   0.1       1.1   3.9e+03      11      21 ..     353     363 ..     351     365 .. 0.81

  Alignments for each domain:
  == domain 1  score: 83.9 bits;  conditional E-value: 1.7e-27
                 HHHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHHHHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ   1 dyYeiLgvskdasedeIkkaYrklalkyHPDknpkdpeaeekFkeineAyevLsdpekRkqYD 63 
                 +yYeiL+++kd+++ eIkk+Yrklal++HPDkn + p+a+e+Fk++++A++vLsdp+ R++YD
  EPX72315.1 111 EYYEILNLKKDCKDIEIKKSYRKLALQLHPDKN-HAPNADEAFKKVSKAFQVLSDPNMRAHYD 172
                 59*******************************.9***************************9 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.1
                 TG-HHHHHHHH CS
        DnaJ  11 dasedeIkkaY 21 
                 + +ed+I+k+Y
  EPX72315.1 353 EYKEDQIRKSY 363
                 567999***99 PP

>> CBFB_NFYA  CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.4      0.77   2.8e+03      16      28 ..     247     259 ..     244     265 .. 0.75
   2 ?   14.2   0.7   1.4e-05      0.05       2      29 ..     313     340 ..     312     363 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.77
   CBFB_NFYA  16 RReaRakleaelk 28 
                 RR +R+++e+ ++
  EPX72315.1 247 RRYRRQQAEDTNN 259
                 8899999887654 PP

  == domain 2  score: 14.2 bits;  conditional E-value: 1.4e-05
   CBFB_NFYA   2 plyVNakQynrIlkRReaRakleaelkl 29 
                 p+yVN+kQyn +  R + R + + e++ 
  EPX72315.1 313 PFYVNPKQYNSLSSRDSLRLANQIEQQY 340
                 89*************9999877765555 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   8.3e-05       0.3       4      33 ..      11      40 ..       8      41 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 8.3e-05
       TPR_2  4 lynlGlayyklgdyeeAleafekAleldPn 33
                +  l++ y+++gdy++A ++ +k+ ++ P+
  EPX72315.1 11 CISLARKYLEAGDYQKASKFTDKSERILPT 40
                567999***************999988886 PP

>> DUF5638  Family of unknown function (DUF5638)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   1.7   9.6e-05      0.35      31      89 ..     102     160 ..      86     164 .. 0.78
   2 ?   -0.7   0.0      0.51   1.8e+03      35      72 ..     335     375 ..     326     395 .. 0.64

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 9.6e-05
                 HHHHHHHH..HHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHTTSS-HHHHHHHHTTT-- CS
     DUF5638  31 kqlqeikt..yYnesftkakkektkeeiveeYeelvlllsqvkngeisadeAleaiekkte 89 
                 +++ + k+  yY+    + kk +++ ei ++Y++l l+l+  kn   +adeA+++++k+ +
  EPX72315.1 102 HKITKLKQheYYEIL--NLKKDCKDIEIKKSYRKLALQLHPDKNHAPNADEAFKKVSKAFQ 160
                 444444431155444..4789999********************************99765 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.51
                 HHHHHHHHHHHT...--SHHHHHHHHHHHHHHHHHHHHHHT CS
     DUF5638  35 eiktyYnesftk...akkektkeeiveeYeelvlllsqvkn 72 
                 +i++ Y+e+ ++    ++e ++++i ++Y  ++   ++++ 
  EPX72315.1 335 QIEQQYAERVHAeciKEREYKEDQIRKSYGWFFPDAEKLSR 375
                 55555555555311135556667777777777766666653 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (402 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1481  (0.0826036); expected 358.6 (0.02)
Passed bias filter:                      636  (0.0354733); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.55u 0.29s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 2784.60
//
Query:       EPX72316.1  [L=785]
Description: cytoplasmic methionine-tRNA ligase Mrs1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   9.3e-153  508.6   0.4   1.5e-152  507.9   0.4    1.3  1  tRNA-synt_1g  tRNA synthetases class I (M)
    5.5e-09   34.8   0.6    1.4e-05   23.5   0.0    2.5  2  tRNA-synt_1   tRNA synthetases class I (I, L, M and V)
  ------ inclusion threshold ------
      0.055   13.9   0.0        4.3    7.8   0.0    2.5  2  Rep_fac_C     Replication factor C C-terminal domain


Domain annotation for each model (and alignments):
>> tRNA-synt_1g  tRNA synthetases class I (M)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  507.9   0.4  2.5e-156  1.5e-152       1     391 []     223     615 ..     223     615 .. 0.99

  Alignments for each domain:
  == domain 1  score: 507.9 bits;  conditional E-value: 2.5e-156
                   EEEEE--B--SS---HHHHH.HHHHHHHHHHHHHHTT-EEEEEEEE---SHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHHTT---SEEEETTSHHH CS
  tRNA-synt_1g   1 vlvttalpYangklHlGhll.evisaDifaRykrlrgeevlfvcgtDehGtpielkAekegvtpeelvekvheeikelfkklnisfdkygrttseeh 96 
                   +lvt+alpY+n+++HlG+++ +++saD+faRy+r+r++++l++cgtDe+Gt++e+kA +egv+p+el++k+++ +k+++++++i+fd++grtt+ ++
    EPX72316.1 223 ILVTSALPYVNNVPHLGNIVgSTLSADVFARYHRARNHNTLYICGTDEYGTATETKALEEGVSPKELCDKYNALHKQVYNWFEIEFDEFGRTTTPKQ 319
                   69*********************************************************************************************** PP

                   HHHHHHHHHHHHHTT-EEEEEEEEEEETTTTEEE-GGG-EE........-TTS-EE-TTSSB-E................EEE.EEEEEE-GGGGHH CS
  tRNA-synt_1g  97 kelvqeifkklkekgliyekeieqlycpkderflpdryvegtCPkckseeargdqceecgkkleptelinpksaisgskpevketehlffklskfek 193
                   +e++q+if+kl+e+g+++  +++qlyc+ ++ +l+dryveg CPkc++e+argdqc++cg  l+  eli+pk+++ gs+p+ +et+h+f++l+k++ 
    EPX72316.1 320 TEIAQHIFNKLHENGYMSADSMTQLYCEVHNGYLADRYVEGICPKCQYEDARGDQCDKCGGLLNAFELIKPKCKLDGSEPVKRETSHIFLSLDKLQP 416
                   ************************************************************************************************* PP

                   HHHHHH.HH-TT..SHHHHHHHH.HHHHT----EE-ESS-SSS-EET..TECCEEE-HHHHHHHHHHHTTTTT-...TTSGGGG.G--S......EE CS
  tRNA-synt_1g 194 klkewieeeeke..leenvkkivkewlkegLkdlaisrdldwGipvP..gaekkvlYVWldAligYisatkelakkkgeeekwkeyWakdkevelvh 286
                   ++++w++e   e  ++ n + i+++wlkegL++++i+rdl+wG pvP  +  +kvlYVW+dA+igYis+t +++      ++w+++W++ ++v+l++
    EPX72316.1 417 AVETWVTEAAVEgkWTVNGRAITESWLKEGLRPRCITRDLKWGTPVPlkEFSDKVLYVWFDAPIGYISITANYT------DEWEKWWRNPEHVKLYQ 507
                   ******98888789**********************************99***********************9......89*****99999***** PP

                   EEEGGGHHHHHTHHHHHHHH..TT----S-EEEE--EEE--------------HHHHHHH.H-HHHHHHHHHHHS-TTS-EEE-HHHHHHHHHHHCC CS
  tRNA-synt_1g 287 figkdiikFHtifwPaillg..aelklpkkvvaheyltvegkKlSkSrgvvvkakealer.ldadllRYylaaeapekkDldfswedfvervNseLa 380
                   f+gkd+++FHt+++P+ llg  +++++++++ +++yl++e +K+SkSrgv+v+ ++a++  l++ ++RYyl++++pe++D+ f+w+df+ r NseL 
    EPX72316.1 508 FMGKDNVPFHTVIFPSSLLGtkEKWTMLHHINTTDYLNYETGKFSKSRGVGVFGNTAQDIgLSSSVWRYYLLSTRPETSDTMFTWKDFITRHNSELL 604
                   ********************999************************************************************************** PP

                   CHHHHHHHHH. CS
  tRNA-synt_1g 381 dklgnlvnRvl 391
                   +++gn+vnR+l
    EPX72316.1 605 ANVGNFVNRTL 615
                   *********85 PP

>> tRNA-synt_1  tRNA synthetases class I (I, L, M and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.0   2.4e-09   1.4e-05      20      80 ..     218     279 ..     206     359 .. 0.83
   2 !    8.9   0.3   6.5e-05      0.39     362     433 ..     389     464 ..     375     513 .. 0.74

  Alignments for each domain:
  == domain 1  score: 23.5 bits;  conditional E-value: 2.4e-09
  tRNA-synt_1  20 kekkefilvdgPPyvtGslHiGhalaktlk.divirykrmkGkevlyvpGwDhaGlaieakv 80 
                  +++++  ++   Pyv+  +H+G+++ +tl  d+  ry+r + +++ly  G+D  G a+e+k 
   EPX72316.1 218 ENEPNILVTSALPYVNNVPHLGNIVGSTLSaDVFARYHRARNHNTLYICGTDEYGTATETKA 279
                  446667777888*****************5599*************************9864 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 6.5e-05
  tRNA-synt_1 362 vpfcerskkpiiyrateqWfvrvkeladaalkavekvqfvpks...kekryaswlen.iqdWciSRqrwWGhripl 433
                   p c+  +   + r t+  f ++++l+ a+   v+++    k+   +++  +swl++  +  ci R++ WG+++pl
   EPX72316.1 389 KPKCKLDGSEPVKRETSHIFLSLDKLQPAVETWVTEAAVEGKWtvnGRAITESWLKEgLRPRCITRDLKWGTPVPL 464
                  56777777666778888999999999988888887666665553224566789*9874799**************8 PP

>> Rep_fac_C  Replication factor C C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.0   0.00072       4.3      38      76 ..     110     147 ..     107     149 .. 0.88
   2 ?    3.1   0.0     0.022   1.3e+02      20      49 ..     321     350 ..     308     363 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.00072
                 HHHHHHHHHGCCS..S-HHHHHHHHHHHHHHHHHHHCTH CS
   Rep_fac_C  38 diltqlhrvvkeqeelpeaqkleilellgeiekrlveGa 76 
                 ++l+ l + +k+ ++++e+  +  + l+++i++++++Ga
  EPX72316.1 110 ELLSLLQEAIKQ-DSISENFTPAEIALVADIHFCITNGA 147
                 577888899999.68*****9999999***********8 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.022
                 HHHHHHHHHHHHC---HHHHHHHHHHHGCC CS
   Rep_fac_C  20 eaykklrellvekGysaediltqlhrvvke 49 
                 e+ + + ++l e+Gy  +d +tql+  v++
  EPX72316.1 321 EIAQHIFNKLHENGYMSADSMTQLYCEVHN 350
                 45555557*****************88876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (785 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       723  (0.0403257); expected 358.6 (0.02)
Passed bias filter:                      618  (0.0344693); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.75u 0.30s 00:00:01.05 Elapsed: 00:00:00.48
# Mc/sec: 4943.58
//
Query:       EPX72317.1  [L=256]
Description: phosphoprotein phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.9e-48  163.6   0.0    4.7e-48  162.9   0.0    1.3  1  Y_phosphatase2  Tyrosine phosphatase family
    1.7e-11   44.6   0.0      3e-11   43.7   0.0    1.3  1  Y_phosphatase3  Tyrosine phosphatase family
  ------ inclusion threshold ------
      0.087   12.4   0.0       0.12   11.9   0.0    1.2  1  Y_phosphatase   Protein-tyrosine phosphatase


Domain annotation for each model (and alignments):
>> Y_phosphatase2  Tyrosine phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  162.9   0.0   7.8e-52   4.7e-48       2     152 ..      77     239 ..      76     252 .. 0.94

  Alignments for each domain:
  == domain 1  score: 162.9 bits;  conditional E-value: 7.8e-52
                     ---TT-EEEET.TEEEESS--HHHHHHHHHCT-SEEEE-SSS---HHHHHHHHHCT-EEEE-------GG...........G----HHHHHHHHH CS
  Y_phosphatase2   2 vpplnFsaves.elyrssyprasnfsflksLkLktiislspeeesqdelqfleeekiklyhiaiesnkee...........lveiksdllkkalk 84 
                     v+p+nF+ v++  ++rss+p+ +nf fl+sL ++ti+sl++ee++ +el ++ +++ik+yh+ ++++k +           +  +++ l+kk l 
      EPX72317.1  77 VVPENFGIVYPnIIFRSSCPSRTNFAFLESLFIRTIVSLRQEEYTDQELEYMATKNIKYYHFGMPGSKYRkqdsvskeegnDLIDIDILVKKSLY 171
                     89********9889******************************************************9999*******9877778899****** PP

                     HHH-GGG-SEEEE-SSSSSHHHHHHHHHHHHTTB-HHHHHHHHHHHHCCC--HHHHHHHHC---HHHH CS
  Y_phosphatase2  85 lllnkenypvllhckrGkhrtglvigclRklqkWslasilnEyrrFsgskkrivdeefienfdselev 152
                     ++lnke +pvllhc+ Gkhrtg+v+g lR+l++Ws+  +++Ey ++s +k+r+vd+e+i +f+ + + 
      EPX72317.1 172 VILNKEFWPVLLHCSGGKHRTGIVVGSLRALMGWSVQDRIDEYVSYSYPKEREVDKEYIRDFTGDPTL 239
                     ***************************************************************99765 PP

>> Y_phosphatase3  Tyrosine phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.7   0.0     5e-15     3e-11      22     157 ..      84     215 ..      77     248 .. 0.75

  Alignments for each domain:
  == domain 1  score: 43.7 bits;  conditional E-value: 5e-15
  Y_phosphatase3  22 kvrpgvlyRsaelsklteadlakLadlgirtviDLRspeEreaeap....legaryvhlpveeaaeeekeeeeaeetlaelYrellesakkayrk 112
                      v p++++Rs+  s+ +    a L++l irt++ LR++e  ++ +     +++++y+h+ +       ++ +++++  +e  ++l++     ++k
      EPX72317.1  84 IVYPNIIFRSSCPSRTN---FAFLESLFIRTIVSLRQEEYTDQ-ELeymaTKNIKYYHFGM-----PGSKYRKQDSVSKEEGNDLID-IDILVKK 168
                     588999****9999865...9***************9988555.22233333346666666.....233333333444444555555.5677889 PP

  Y_phosphatase3 113 vfealadee..pvlfHCtaGKDRTGvlaalllsllGvdeedivaDYl 157
                      +  ++++e  pvl HC+ GK RTG+++  l +l+G + +d +++Y+
      EPX72317.1 169 SLYVILNKEfwPVLLHCSGGKHRTGIVVGSLRALMGWSVQDRIDEYV 215
                     9999999778***********************************96 PP

>> Y_phosphatase  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0     2e-05      0.12     148     195 ..     152     203 ..     103     216 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 2e-05
                    SGSCCHHHHHHHHHHHHHH....STTSS-EEEECSSSSHHHHHHHHHHHHHH CS
  Y_phosphatase 148 vpesaksllklirkveksk....eaksgpvvVhCsaGvgRtgtfvaldillq 195
                     +e+ ++l+++   v+ks     +++  pv+ hCs G  Rtg++v    +l+
     EPX72317.1 152 SKEEGNDLIDIDILVKKSLyvilNKEFWPVLLHCSGGKHRTGIVVGSLRALM 203
                    4455666666655566655777777889****************98877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       487  (0.0271627); expected 358.6 (0.02)
Passed bias filter:                      405  (0.0225891); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1831.39
//
Query:       EPX72318.1  [L=114]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.8e-26   90.5   2.5    1.1e-25   90.2   2.5    1.1  1  Aim19     Altered inheritance of mitochondria protein 19


Domain annotation for each model (and alignments):
>> Aim19  Altered inheritance of mitochondria protein 19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.2   2.5     6e-30   1.1e-25      13     115 .]      21     111 ..      10     111 .. 0.89

  Alignments for each domain:
  == domain 1  score: 90.2 bits;  conditional E-value: 6e-30
       Aim19  13 alllaslllsvkksaalklsklallkpsklsvllfgaafalggymiydgDlenGsGfltAWSllYllvngkksikslrrgkvvPlaLsalalanavlyG 111
                 a++las +++ k++++          p    +ll+g++ a+gg  i +gD+ nGsG+ tAWSl+Y ++n+kksiks+r   ++PlaL+++a +n++ yG
  EPX72318.1  21 AFVLASIPRALKRPVGG---------PFAPGCLLCGSFVAVGGLAIASGDIANGSGISTAWSLAYFMINAKKSIKSFR---MYPLALCTFAGINTIGYG 107
                 45566666777777666.........999*************************************************...****************** PP

       Aim19 112 krff 115
                 ++ f
  EPX72318.1 108 RTIF 111
                 9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       347  (0.0193541); expected 358.6 (0.02)
Passed bias filter:                      262  (0.0146132); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.23s 00:00:00.59 Elapsed: 00:00:00.37
# Mc/sec: 914.20
//
Query:       EPX72319.1  [L=253]
Description: hypothetical protein SOCG_00084 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.28   11.4   0.1       0.28   11.4   0.1    2.4  3  DUF2530   Protein of unknown function (DUF2530)


Domain annotation for each model (and alignments):
>> DUF2530  Protein of unknown function (DUF2530)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.2      0.22   3.9e+03      20      20 ..      88      88 ..      69     123 .. 0.60
   2 ?   -1.1   0.1      0.13   2.3e+03       8      33 ..     139     164 ..     134     169 .. 0.74
   3 ?   11.4   0.1   1.6e-05      0.28      13      58 ..     174     219 ..     170     223 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.22
     DUF2530 20 g 20
                 
  EPX72319.1 88 T 88
                2 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.13
     DUF2530   8 rrLtdprpvivvgtllWlvalvvllv 33 
                 r+L+++ ++++  + l  v++vv + 
  EPX72319.1 139 RVLSNMCVAVICTASLNGVGFVVYYN 164
                 56777777788888888888888765 PP

  == domain 3  score: 11.4 bits;  conditional E-value: 1.6e-05
     DUF2530  13 prpvivvgtllWlvalvvllvvgdaleswlpvclaGlvvGllGlai 58 
                 ++ ++  g+++  val vl+ ++d+ +  + ++  G ++G +G++i
  EPX72319.1 174 MNDIAFYGICIVNVALFVLFWSTDTRQLRIFIADLGNGMGSIGYGI 219
                 566788999999*********************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (253 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       935  (0.0521501); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 1839.61
//
Query:       EPX72320.1  [L=283]
Description: xylose and arabinose reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.2e-39  133.7   0.0    6.3e-37  127.3   0.0    2.0  1  Aldo_ket_red  Aldo/keto reductase family
  ------ inclusion threshold ------
       0.15   11.4   0.0       0.26   10.7   0.0    1.2  1  DUF4504       Domain of unknown function (DUF4504)
       0.17   11.7   0.0        1.5    8.7   0.0    2.1  2  VanY          D-alanyl-D-alanine carboxypeptidase


Domain annotation for each model (and alignments):
>> Aldo_ket_red  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.3   0.0   1.1e-40   6.3e-37      14     292 ..      28     267 ..      21     270 .. 0.93

  Alignments for each domain:
  == domain 1  score: 127.3 bits;  conditional E-value: 1.1e-40
                   TS-HHHHHHHHHHHHHTT--EEE--TT-TTTHHHHHHHHHHHH....-TTTGGG-EEEEEE--SSSTTSSSS-HHHHHHHHHHHHHHHT-S-EEEEE CS
  Aldo_ket_red  14 eiskeealellrraleaGinffDtAevYgkgqseellGealkk....srkkreeviiatKvdlrdaeiksglskeniresleeslkrLgtdyvDlll 106
                   +i+ ++ ++l+ +al+ G++ +Dt+evY    +e++ G+a+ +    +r++r+++i++tK+         +   +  r+s++ sl  Lgt y+D++ 
    EPX72320.1  28 RIKYADCYDLVTAALDTGYRRIDTSEVY---GNEDVCGKAVIDwcerNRAPRTDIILSTKL-------ANCSDYAATRASIRSSLHHLGT-YIDIFS 113
                   56688999********************...9*******88888888**************.......44555567899**********6.****** PP

                   E-S--TTS-.HHHHHHHHHHHHHTTSEEEEEEES--HHHHHHH.HHTTT--EEEEE-B-BTT-HHHHTTHHHHHHHTT-EEEEBSTTGGGTTGTTTS CS
  Aldo_ket_red 107 lHrpdpslpsieevldaleelvkeGkiraiGvSnfsveqleka.kkkkkvkivavqveynllreleeegllelckkkgvpliaysplggGlltgkyq 202
                   +  p   ++ + e ++++ee+v+ G ir++Gv+n+ +++le++  ++ k+ ++++q+e +++  l+   ++  ck +++ + ayspl +G++     
    EPX72320.1 114 IFSPAAGSKARIESWRVMEEFVDRGDIRYLGVCNYGIKHLEELyASEPKYFPIVNQIELHPF--LARDDIVNWCKGHDILVEAYSPLTNGIRL---- 204
                   ********************************************99****************..***************************97.... PP

                   S---SSSCCC-------TS-HHHHHHHHHHHHHHHHTT--HHHHHHHHHTTSTT-SEEEE--SSHHHHHHHHGGGG----HHHHHHHHHH CS
  Aldo_ket_red 203 seedkedkeprkdlkrdertsknldaaeelselakehgvslaqlalryalsqpavgivipgasnieqlednldalelklseeevaeldel 292
                                            ++++l ela++ gv++  l lr+ l  +++ i+i++++n++q+++nl+ ++++++ee  +++ +l
    EPX72320.1 205 -------------------------QDPTLVELANSVGVDVPRLLLRWSL--EKGYIPIVQCTNLDQIKHNLNIFSFQIPEEIKDRITSL 267
                   .........................6899*********************..*****************************988888776 PP

>> DUF4504  Domain of unknown function (DUF4504)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   4.3e-05      0.26     201     235 ..     239     273 ..     229     277 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 4.3e-05
     DUF4504 201 srnqeskkkseeLlsFsvPeelsseikssleqWak 235
                 + n ++ k++ +++sF +Pee+   i s  e+W  
  EPX72320.1 239 CTNLDQIKHNLNIFSFQIPEEIKDRITSLDEHWHA 273
                 4444556677***********************86 PP

>> VanY  D-alanyl-D-alanine carboxypeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.0   0.00024       1.5      49      79 ..      85     115 ..      38     138 .. 0.78
   2 ?    0.6   0.0     0.075   4.5e+02      96     128 ..     243     273 ..     231     278 .. 0.77

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00024
                 HHHHHHHHHHS--TTT-GGGGTSEEEEEEGG CS
        VanY  49 eeklkeilrvsalpGaSeHhtGlaiDisdke 79 
                   ++++ + + a   +S Hh+G+ iDi++  
  EPX72320.1  85 LANCSDYAATRASIRSSLHHLGTYIDIFSIF 115
                 5566677788888999***********9875 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.075
                 HHHHHHGGGGTEEESS-TTGHHHHSS---TTEE CS
        VanY  96 kwlqknaakygFvlrypkgkeqetgvsyEpWHl 128
                 +++++n + + F ++  ++ ++  +  +E WH 
  EPX72320.1 243 DQIKHNLNIFSFQIP--EEIKDRITSLDEHWHA 273
                 566777777888776..66777778889****6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (283 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       287  (0.0160076); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.44
# Mc/sec: 1940.53
//
Query:       EPX72321.1  [L=488]
Description: ubiquitin-protein ligase E3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-13   51.3   6.9    1.1e-13   51.3   6.9    2.1  2  zf-RING_2        Ring finger domain
    5.8e-10   38.7   6.2    5.8e-10   38.7   6.2    2.7  3  zf-RING_11       RING-like zinc finger
      3e-08   33.4  10.1    8.1e-08   32.0   3.3    2.2  2  zf-C3HC4_3       Zinc finger, C3HC4 type (RING finger)
    1.6e-07   31.0   6.2    1.6e-07   31.0   6.2    2.3  2  zf-C3HC4_2       Zinc finger, C3HC4 type (RING finger)
    9.8e-07   28.6   5.5    9.8e-07   28.6   5.5    2.3  2  zf-RING_5        zinc-RING finger domain
    1.3e-06   28.3   1.4    1.3e-06   28.3   1.4    2.2  2  zf-RING_UBOX     RING-type zinc-finger
    6.8e-06   26.3   5.0    6.8e-06   26.3   5.0    2.6  2  zf-rbx1          RING-H2 zinc finger domain
    2.2e-05   24.2   7.0    2.2e-05   24.2   7.0    2.3  2  zf-C3HC4         Zinc finger, C3HC4 type (RING finger)
  ------ inclusion threshold ------
      0.017   15.3   5.8      0.098   12.9   5.7    2.3  1  FANCL_C          FANCL C-terminal domain
      0.023   14.6   5.0      0.023   14.6   5.0    1.8  1  Prok-RING_4      Prokaryotic RING finger family 4
      0.037   14.0   0.6      0.037   14.0   0.6    2.1  2  HypA             Hydrogenase/urease nickel incorporation, met
       0.13   12.3   0.0       0.42   10.6   0.0    1.8  1  AP-5_subunit_s1  AP-5 complex subunit sigma-1
       0.24   11.4   0.4        1.7    8.7   0.0    2.1  2  Pox_A3L          Poxvirus A3L Protein
       0.59   10.5   4.9        2.7    8.3   4.9    2.2  1  zinc_ribbon_9    zinc-ribbon
        1.2    9.2   9.5      0.078   13.0   3.6    2.1  1  zf-ANAPC11       Anaphase-promoting complex subunit 11 RING-H
          2    8.5   7.7        1.6    8.8   0.7    2.5  2  DZR              Double zinc ribbon
        3.7    7.8  12.1        6.4    7.1   4.5    3.6  2  CTU2             Cytoplasmic tRNA 2-thiolation protein 2
        4.3    7.4   8.4       0.93    9.5   0.4    2.4  2  zinc-ribbons_6   zinc-ribbons
          5    6.9   9.2       0.24   11.1   3.0    2.0  2  zf-P11           P-11 zinc finger
        6.6    7.2   7.4        3.5    8.1   0.4    2.8  2  Rhodanese_C      Rhodanase C-terminal
        8.6    6.1  11.1      0.077   12.6   3.2    1.7  1  Zn_ribbon_17     Zinc-ribbon, C4HC2 type


Domain annotation for each model (and alignments):
>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   1.1       2.4   2.1e+03       3      21 ..      10      26 ..       8      31 .. 0.65
   2 !   51.3   6.9   1.2e-16   1.1e-13       1      44 []     377     420 ..     377     420 .. 0.98

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 2.4
   zf-RING_2  3 CpICleelssadsvlllpC 21
                C  C +e++++ ++++  C
  EPX72321.1 10 CHACGNEFEQPGNCTR--C 26
                7778778766555552..4 PP

  == domain 2  score: 51.3 bits;  conditional E-value: 1.2e-16
   zf-RING_2   1 deCpICleelssadsvlllpCgHvfhreClerwlrssstCPlCr 44 
                 +eC+IC+e+++++d+v+ lpC+H+fh++C++ wlr + tC +Cr
  EPX72321.1 377 NECTICMENFKETDQVIELPCSHFFHENCVKPWLRVNGTCAICR 420
                 69*****************************************9 PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   1.0       6.4   5.5e+03       2      15 ..      10      24 ..      10      27 .. 0.77
   2 !   38.7   6.2   6.8e-13   5.8e-10       1      29 []     378     406 ..     378     406 .. 0.98
   3 ?    1.4   0.1      0.32   2.7e+02       2      12 ..     416     426 ..     415     429 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 6.4
  zf-RING_11  2 CsICLeefk.pgqal 15
                C  C +ef+ pg++ 
  EPX72321.1 10 CHACGNEFEqPGNCT 24
                777999999778775 PP

  == domain 2  score: 38.7 bits;  conditional E-value: 6.8e-13
  zf-RING_11   1 eCsICLeefkpgqalfilpCsHtFHfkCI 29 
                 eC+IC+e+fk+ + ++ lpCsH FH +C+
  EPX72321.1 378 ECTICMENFKETDQVIELPCSHFFHENCV 406
                 9***************************7 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.32
  zf-RING_11   2 CsICLeefkpg 12 
                 C+IC  ++ p+
  EPX72321.1 416 CAICRAPIDPS 426
                 ****9888775 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.6     0.018        15      25      46 ..       9      29 ..       6      33 .. 0.87
   2 !   32.0   3.3   9.5e-11   8.1e-08       1      48 [.     375     424 ..     375     426 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.018
                E-HHHHHHHHHTT-B-TTT--B CS
  zf-C3HC4_3 25 lCeeCaekllkrkkkCpiCrrp 46
                +C++C +++ ++  +C  C+++
  EPX72321.1  9 YCHACGNEF-EQPGNCTRCNSD 29
                8********.899******986 PP

  == domain 2  score: 32.0 bits;  conditional E-value: 9.5e-11
                 XGSB-TTTSSS...BS-EEETTEEEEEE-HHHHHHHHHTT-B-TTT--B-- CS
  zf-C3HC4_3   1 edeeCviCler...prnvvllpCgHlvlCeeCaekllkrkkkCpiCrrpie 48 
                 ed+eC iC+e+     +v+ lpC H+ + e+C++ +l+ + +C iCr+pi+
  EPX72321.1 375 EDNECTICMENfkeTDQVIELPCSHF-FHENCVKPWLRVNGTCAICRAPID 424
                 589*******84434558999*****.**********************97 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   1.1     0.091        77       1      22 [.       9      30 ..       9      33 .. 0.87
   2 !   31.0   6.2   1.9e-10   1.6e-07       1      40 []     378     419 ..     378     419 .. 0.96

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.091
  zf-C3HC4_2  1 kCpiCldmlkdpsvvtpCgHvf 22
                +C+ C +++++p   t C+  f
  EPX72321.1  9 YCHACGNEFEQPGNCTRCNSDF 30
                6*****************8666 PP

  == domain 2  score: 31.0 bits;  conditional E-value: 1.9e-10
  zf-C3HC4_2   1 kCpiCldmlkdpsvvt..pCgHvfCqkCilrsLeekneCPlC 40 
                 +C+iC++ +k++  v+  pC H f+++C++++L+ +  C +C
  EPX72321.1 378 ECTICMENFKETDQVIelPCSHFFHENCVKPWLRVNGTCAIC 419
                 6**********9988899*********************999 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   1.6     0.087        74      24      43 ..       9      27 ..       8      28 .. 0.89
   2 !   28.6   5.5   1.1e-09   9.8e-07       1      43 [.     378     420 ..     378     421 .. 0.97

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.087
   zf-RING_5 24 fCekClkkllekeavCpiCr 43
                +C++C ++   ++ +C+ C+
  EPX72321.1  9 YCHACGNEFE-QPGNCTRCN 27
                7*****9999.999999997 PP

  == domain 2  score: 28.6 bits;  conditional E-value: 1.1e-09
   zf-RING_5   1 hCnkCfeklskeekfyltsCgHifCekClkkllekeavCpiCr 43 
                 +C +C+e+++++++++ ++C+H+f+e+C+k  l  + +C iCr
  EPX72321.1 378 ECTICMENFKETDQVIELPCSHFFHENCVKPWLRVNGTCAICR 420
                 6********************************99*******9 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   1.4       9.9   8.4e+03       1      11 [.      10      20 ..      10      27 .. 0.74
   2 !   28.3   1.4   1.5e-09   1.3e-06       1      38 [.     379     416 ..     379     417 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 9.9
  zf-RING_UBOX  1 CpIClelftdP 11
                  C  C ++f++P
    EPX72321.1 10 CHACGNEFEQP 20
                  88899999998 PP

  == domain 2  score: 28.3 bits;  conditional E-value: 1.5e-09
  zf-RING_UBOX   1 CpIClelftdP..lv.lpCGHtFCreClwelskslegafkC 38 
                   C+IC+e f++   ++ lpC+H F+++C+   +++l+ + +C
    EPX72321.1 379 CTICMENFKETdqVIeLPCSHFFHENCV---KPWLRVNGTC 416
                   *********66657778***********...8888888888 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.4      0.72   6.1e+02       3      20 ..      10      29 ..       9      46 .. 0.71
   2 !   26.3   5.0     8e-09   6.8e-06      12      55 .]     377     420 ..     374     420 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.72
     zf-rbx1  3 CaiCrnele..eacieckap 20
                C  C ne+e  ++c++c+++
  EPX72321.1 10 CHACGNEFEqpGNCTRCNSD 29
                77888888844467777654 PP

  == domain 2  score: 26.3 bits;  conditional E-value: 8e-09
     zf-rbx1  12 eacieckapgdeecpvvlGeCgHaFHlhCiskWlktrkvCPlcr 55 
                 ++c+ c ++ +e+ +v+   C+H FH +C++ Wl+ + +C +cr
  EPX72321.1 377 NECTICMENFKETDQVIELPCSHFFHENCVKPWLRVNGTCAICR 420
                 67888888888764444459***********************8 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   1.4      0.13   1.1e+02       1      18 [.      10      27 ..      10      31 .. 0.92
   2 !   24.2   7.0   2.6e-08   2.2e-05       1      41 []     379     419 ..     379     419 .. 0.95

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.13
                -TTT-S--SS-E.E-TTS CS
    zf-C3HC4  1 CpiCleeakepnelleCk 18
                C+ C +e+++p   + C+
  EPX72321.1 10 CHACGNEFEQPGNCTRCN 27
                ***********9999996 PP

  == domain 2  score: 24.2 bits;  conditional E-value: 2.6e-08
                 -TTT-S--SS-E...E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepn..elleCkHsfCskCirkilksrkkvkCPlC 41 
                 C iC+e++ke++    l+C H f+++C++ +l+   + +C +C
  EPX72321.1 379 CTICMENFKETDqvIELPCSHFFHENCVKPWLR--VNGTCAIC 419
                 **********998899*****************..7788**99 PP

>> FANCL_C  FANCL C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   5.7   0.00011     0.098       3      44 ..     377     413 ..     375     430 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.00011
                 -S-SSS--SS-TT-----B--S-TT----B-SGGGHHHHHHH CS
     FANCL_C   3 veCgiCyayrldsgevpdisCdnekCnkkfHsaCLkeWlrsl 44 
                  eC iC+ ++ ++++v +       C++ fH++C+k Wlr +
  EPX72321.1 377 NECTICMENFKETDQVIEL-----PCSHFFHENCVKPWLRVN 413
                 79*****999966666544.....58999**********975 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   5.0   2.6e-05     0.023       1      43 [.     379     426 ..     379     429 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 2.6e-05
  Prok-RING_4   1 CvlCgeq..ekkaile.pCgHlvCkeCfdsk.dls.sCPlCqrrisks 43 
                  C +C e+  e++ ++e pC H + ++C + +   + +C +C+  i++s
   EPX72321.1 379 CTICMENfkETDQVIElPCSHFFHENCVKPWlRVNgTCAICRAPIDPS 426
                  99***998866666655**************86778******998865 PP

>> HypA  Hydrogenase/urease nickel incorporation, metallochaperone, hypA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.6   4.3e-05     0.037      65     102 ..       2      36 ..       1      39 [. 0.85
   2 ?   -0.2   0.5       1.1   9.8e+02      72      90 ..     378     417 ..     355     433 .. 0.64

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 4.3e-05
                 EEE--EEEETTTS-EEECHHHHHS-TTTSSS-EEEEES CS
        HypA  65 eevpvkvrCreCgkefeleekalrCpkCgsadveivsG 102
                 e+ pv+ +C+ Cg+efe+     +C +C+s  ve+++ 
  EPX72321.1   2 ESGPVVWYCHACGNEFEQP---GNCTRCNSDFVEMIES 36 
                 67899************77...36******99998875 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 1.1
                 EETTTS-EEECHHH..HH...................S-T CS
        HypA  72 rCreCgkefeleek..al...................rCp 90 
                 +C+ C ++f+++++  +l                   +C 
  EPX72321.1 378 ECTICMENFKETDQviELpcshffhencvkpwlrvngTCA 417
                 7999999999665434445555555555555555555555 PP

>> AP-5_subunit_s1  AP-5 complex subunit sigma-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00049      0.42      63     134 ..     205     275 ..     195     278 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00049
  AP-5_subunit_s1  63 alkrqasgrpvvedllsalseeeialaeaeeGvfrLeegdpfkeekivlWlgvgslgftlvceahENlllae 134
                      +++r+a+ ++ ++  + + +e++    ea+ G+fr ++g pf ++++v  +g  +  f  v  ++EN + a+
       EPX72321.1 205 SVNREAADANASSGQQPSVEEQAQSNDEAQPGFFRSNSGMPFAAQSFVFSMGP-NGTFQQVNTPSENTQEAQ 275
                      4566666666555444444444445556899***************9986665.556888999999987765 PP

>> Pox_A3L  Poxvirus A3L Protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.0     0.002       1.7       6      25 ..      17      36 ..      14      41 .. 0.88
   2 ?    0.1   0.1      0.94     8e+02       8      21 ..     375     388 ..     372     391 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.002
     Pox_A3L  6 LdpprrCskCaanlveylke 25
                 ++p  C++C +++ve++++
  EPX72321.1 17 FEQPGNCTRCNSDFVEMIES 36
                67899************987 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.94
     Pox_A3L   8 pprrCskCaanlve 21 
                 +   C+ C++n+ e
  EPX72321.1 375 EDNECTICMENFKE 388
                 6689*******976 PP

>> zinc_ribbon_9  zinc-ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   4.9    0.0032       2.7       4      35 .]       9      34 ..       7      34 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0032
  zinc_ribbon_9  4 WChqCdrfVsvspdedsdvlCPhCgggFVEei 35
                   +Ch C ++++     ++   C +C+++FVE i
     EPX72321.1  9 YCHACGNEFE-----QPGN-CTRCNSDFVEMI 34
                   8999998888.....4556.**********65 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   3.6   9.1e-05     0.078      35      79 ..     379     421 ..     370     425 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 9.1e-05
                 -TTCSTTTTTS-EEEBT.TS-EEEHHHHHHHHHHHSTSSB-TTTSS CS
  zf-ANAPC11  35 cpsckfpGddcplvlGk.ckhnfhlhcilkwletetskglcpmcrq 79 
                 c  c     +   v+   c+h fh+ c+  wl     +g c +cr 
  EPX72321.1 379 CTICMENFKETDQVIELpCSHFFHENCVKPWLRV---NGTCAICRA 421
                 566666666666666666**************75...678888885 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.7    0.0019       1.6      14      37 ..       9      29 ..       5      38 .. 0.87
   2 ?    2.7   1.1      0.16   1.3e+02      13      41 ..     377     426 ..     370     430 .. 0.75

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0019
         DZR 14 fCseCgtklkavaaedrCpsCgek 37
                +C++Cg++ ++   + +C +C+++
  EPX72321.1  9 YCHACGNEFEQ---PGNCTRCNSD 29
                9********85...99*****986 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.16
         DZR  13 rfCseCgtklkavaa.....................edrCpsCgekvdpe 41 
                 + C  C ++ k++ +                     + +C  C +++dp 
  EPX72321.1 377 NECTICMENFKETDQvielpcshffhencvkpwlrvNGTCAICRAPIDPS 426
                 56888888887666688888888887778888887788888888888775 PP

>> CTU2  Cytoplasmic tRNA 2-thiolation protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.91   7.7e+02       4      29 ..     185     211 ..     183     241 .. 0.70
   2 ?    7.1   4.5    0.0075       6.4      42      88 ..     410     456 ..     358     479 .. 0.62

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.91
        CTU2   4 rLtekFilk.lekdfpstvstvvrTge 29 
                 +Lt +++++ l++  ps  s v+r ++
  EPX72321.1 185 NLTGAYVDTpLQETLPSYASSVNREAA 211
                 677777764488888888888888665 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0075
        CTU2  42 letsekCalCglplddkakewkrtitiselseteseeekeelekake 88 
                 l+ + +Ca+C++p+d++ k ++ + + ++++e++se+ ++ + ++ +
  EPX72321.1 410 LRVNGTCAICRAPIDPSIKVNEGSNNPQQSQEHNSENPSQHEAHTAN 456
                 677899********887777666666666665555544322222222 PP

>> zinc-ribbons_6  zinc-ribbons
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.4    0.0011      0.93      17      38 ..       8      29 ..       1      38 [. 0.82
   2 ?    0.9   2.5      0.55   4.7e+02       2      39 ..     378     423 ..     375     428 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0011
                    EE-TTT--EEEEEEE-SSS-S- CS
  zinc-ribbons_6 17 yhCeaCqedlkkealCpeCeqe 38
                      C+aC +++++   C +C++ 
      EPX72321.1  8 WYCHACGNEFEQPGNCTRCNSD 29
                    5799999999999999999875 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.55
                     --SSS-S--EE-S.......SEEE-TTT--.EEEEEEE-SSS-S-- CS
  zinc-ribbons_6   2 kCpeCqqelekrg.......eqyhCeaCqe.dlkkealCpeCeqel 39 
                     +C  C ++ ++++       ++++ e+C +  l+++ +C  C+ ++
      EPX72321.1 378 ECTICMENFKETDqvielpcSHFFHENCVKpWLRVNGTCAICRAPI 423
                     6999999988555588888888888999885677888999999887 PP

>> zf-P11  P-11 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1       2.1   1.8e+03      31      42 ..     372     383 ..     372     387 .. 0.78
   2 ?   11.1   3.0   0.00028      0.24      11      49 ..     388     427 ..     376     428 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 2.1
                 HHHHSSBETTTS CS
      zf-P11  31 lLsvserCpiCk 42 
                 lL   + C iC 
  EPX72321.1 372 LLGEDNECTICM 383
                 5667899***96 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.00028
                 --SSEEE..-SSSEEEHHHHHHHHHHSSBETTTSSB----- CS
      zf-P11  11 kdksLve..CsdHYLClrClqllLsvserCpiCkkPLPtkl 49 
                 + ++++e  C  H+   +C +  L+v   C iC+ P+  ++
  EPX72321.1 388 ETDQVIElpC-SHFFHENCVKPWLRVNGTCAICRAPIDPSI 427
                 4455665324.599**********************97776 PP

>> Rhodanese_C  Rhodanase C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.4    0.0041       3.5      17      46 ..       6      31 ..       1      41 [. 0.85
   2 ?    1.1   1.7      0.61   5.2e+02      17      30 ..     412     425 ..     375     436 .. 0.79

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0041
  Rhodanese_C 17 vvgkCieCgkpvdelrkrnCanedCnelvl 46
                 vv  C++Cg++++  +  nC+  +Cn  ++
   EPX72321.1  6 VVWYCHACGNEFE--QPGNCT--RCNSDFV 31
                 6778*********..99***7..7998775 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.61
  Rhodanese_C  17 vvgkCieCgkpvde 30 
                  v g+C +C +p d 
   EPX72321.1 412 VNGTCAICRAPIDP 425
                  66889999999884 PP

>> Zn_ribbon_17  Zinc-ribbon, C4HC2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   3.2   9.1e-05     0.077       5      46 ..     377     417 ..     374     423 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 9.1e-05
  Zn_ribbon_17   5 ksCayCelavkgr.vvlcgvCeHvlHasCarewfenddlaeCp 46 
                   ++C++C  + k    v+   C H  H++C++ w+  +    C+
    EPX72321.1 377 NECTICMENFKETdQVIELPCSHFFHENCVKPWLRVNG--TCA 417
                   68999999988752566778*************99877..554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (488 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       830  (0.0462937); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        68  (0.00379274); expected 17.9 (0.001)
Passed Fwd filter:                        28  (0.00156172); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              21  [number of targets reported over threshold]
# CPU time: 0.60u 0.28s 00:00:00.88 Elapsed: 00:00:00.46
# Mc/sec: 3165.03
//
Query:       EPX72322.1  [L=189]
Description: hypothetical protein SOCG_00087 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-05   24.4   0.5    3.7e-05   23.7   0.5    1.4  1  Fis1_TPR_C  Fis1 C-terminal tetratricopeptide repeat
  ------ inclusion threshold ------
      0.051   13.7   0.1       0.11   12.6   0.1    1.6  1  TPR_2       Tetratricopeptide repeat
      0.052   14.2   0.1       0.22   12.2   0.1    2.1  2  TPR_6       Tetratricopeptide repeat
      0.089   13.6   0.0       0.42   11.4   0.0    2.0  2  DUF4037     Domain of unknown function (DUF4037)
       0.14   11.9   0.2       0.56    9.9   0.2    2.0  1  Fis1_TPR_N  Fis1 N-terminal tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> Fis1_TPR_C  Fis1 C-terminal tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.5     1e-08   3.7e-05       1      51 [.     107     157 ..     107     159 .. 0.93

  Alignments for each domain:
  == domain 1  score: 23.7 bits;  conditional E-value: 1e-08
                 HHHHHHHHHHHHHHT-HHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHT CS
  Fis1_TPR_C   1 reclYylAlGhyklgeYseArryvdalLeiEPenrQaqsLkeliedkikke 51 
                 re +Y +AlG+  l++Y++A  ++ alL+  P+   a +L++ +++  ++e
  EPX72322.1 107 RESMYSIALGYSFLKRYDDACYCTTALLREYPNDLEAVKLHAELKEMRDRE 157
                 899**************************************9998876666 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   3.1e-05      0.11       3      34 .]     109     140 ..     107     140 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 3.1e-05
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldPnn 34 
                   y ++l y  l++y++A  +  + l+ +Pn+
  EPX72322.1 109 SMYSIALGYSFLKRYDDACYCTTALLREYPND 140
                 57889999**********************97 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       1.4   5.1e+03      13      26 ..      85      98 ..      78     100 .. 0.77
   2 ?   12.2   0.1   6.1e-05      0.22       1      32 [.     108     139 ..     108     140 .. 0.95

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.4
                HHHHHHHHHHHHHH CS
       TPR_6 13 lgdtdkAlealerl 26
                ++d ++ +++l+r+
  EPX72322.1 85 AQDVEEGITMLRRC 98
                44999999999987 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 6.1e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6   1 dAlyklalsyrklgdtdkAlealerlikeYPd 32 
                 +++y +al y  l+++d+A+     l++eYP+
  EPX72322.1 108 ESMYSIALGYSFLKRYDDACYCTTALLREYPN 139
                 68999*******99*****************9 PP

>> DUF4037  Domain of unknown function (DUF4037)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.36   1.3e+03      42      65 ..      77     100 ..      45     130 .. 0.66
   2 ?   11.4   0.0   0.00012      0.42      28      79 ..     129     180 ..     103     186 .. 0.78

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.36
     DUF4037  42 lkklaarlakiaqegqynleralk 65 
                  +++++r+a+  +eg   l r+++
  EPX72322.1  77 WYLISRRCAQDVEEGITMLRRCME 100
                 355666666666666666666665 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00012
     DUF4037  28 ireklekayPedvrlkklaarlakiaqegqynleralkrgdelaarlalaef 79 
                   ++l ++yP+d+   kl a+l+++++ + +  + ++++   ++  l+la+ 
  EPX72322.1 129 CTTALLREYPNDLEAVKLHAELKEMRDREMIAASSCIAVCTATTFGLLLASW 180
                 5677889**********************99999999877666666666655 PP

>> Fis1_TPR_N  Fis1 N-terminal tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.2   0.00016      0.56       2      26 ..      71      95 ..      70      97 .. 0.92

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00016
  Fis1_TPR_N  2 tkFnYAWgLvkSknredqqeGiaLL 26
                t F+Y+W L+  +  +d++eGi +L
  EPX72322.1 71 TTFEYGWYLISRRCAQDVEEGITML 95
                89********999999********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       503  (0.0280551); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.44
# Mc/sec: 1303.08
//
Query:       EPX72323.1  [L=294]
Description: 60S ribosomal protein L5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.1e-77  258.1   0.0    4.7e-77  257.6   0.0    1.3  1  Ribosomal_L5e    Ribosomal large subunit proteins 60S L5, and
    4.7e-31  107.6   4.1    4.7e-31  107.6   4.1    1.8  2  Ribosomal_L18_c  Ribosomal L18 C-terminal region
  ------ inclusion threshold ------
      0.038   14.4   0.0      0.086   13.2   0.0    1.6  1  Ribosomal_L18p   Ribosomal L18 of archaea, bacteria, mitoch. 
       0.06   13.6   0.1       0.27   11.5   0.1    2.2  1  Thr_synth_N      Threonine synthase N terminus


Domain annotation for each model (and alignments):
>> Ribosomal_L5e  Ribosomal large subunit proteins 60S L5, and 50S L18
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  257.6   0.0   1.1e-80   4.7e-77       1     163 []      14     176 ..      14     176 .. 0.99

  Alignments for each domain:
  == domain 1  score: 257.6 bits;  conditional E-value: 1.1e-80
  Ribosomal_L5e   1 krfqvkfrrrregktdYyarkrliiqdknkyntpkyRlvVrvtnkdiicqiayakiegdkvlaaayskelpkygvkvgltnyaaaYatglllarrl 96 
                    +rfq+k+rrrregktdYyarkrli q+knkyn+pkyRlvVr++n+ ++cq+++++++gd vlaaa+s+elp+yg+k gl n++aaYatgll+arr+
     EPX72323.1  14 SRFQTKYRRRREGKTDYYARKRLISQAKNKYNAPKYRLVVRFSNRFVTCQVISSRVTGDYVLAAAHSSELPRYGIKWGLANWSAAYATGLLVARRA 109
                    6*********************************************************************************************** PP

  Ribosomal_L5e  97 lkklgldkiyegqeevtgeeynveeideekrafkaiLdvGLartttgakvfgalkgavdgglsiphs 163
                    l k+gl+++yeg +e++g+   +e+i++ +r+fk++LdvGL+rt+tg++vfga+kga+dggl++phs
     EPX72323.1 110 LIKIGLADKYEGITEPEGQFELTEAIEHGPRPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLYVPHS 176
                    ******************************************************************7 PP

>> Ribosomal_L18_c  Ribosomal L18 C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.4       1.4   6.2e+03      70      88 ..      23      41 ..       4      51 .. 0.51
   2 !  107.6   4.1   1.1e-34   4.7e-31       2      95 .]     193     287 ..     192     287 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.4
  Ribosomal_L18_c 70 evkkeskkykkkkltleqr 88
                     + + ++ +y +k+l  + +
       EPX72323.1 23 RREGKTDYYARKRLISQAK 41
                     3333444555555444433 PP

  == domain 2  score: 107.6 bits;  conditional E-value: 1.1e-34
  Ribosomal_L18_c   2 evlrkrIfgkhvaeYmeeLkeedeekykkqFskyikkgieaddleelykkahaaIredpvkkek.kekkevkkeskkykkkkltleqrkarvkq 94 
                      e+lrk+I+g+hvaeYme+L ++dee+++kqFs+ i++gie+d+le++y++a+++Iredp +k++ k+ + +k+es kyk++klt+e+rk+r ++
       EPX72323.1 193 ETLRKYIYGGHVAEYMEMLIDDDEERFQKQFSSLIADGIESDQLEDIYAEAFSKIREDPAPKKSdKDLNAIKAESLKYKQRKLTAEERKERFNA 286
                      89**********************************************************9766688899999******************988 PP

  Ribosomal_L18_c  95 K 95 
                      K
       EPX72323.1 287 K 287
                      7 PP

>> Ribosomal_L18p  Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.9e-05     0.086      19      82 ..      43     110 ..      19     116 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.9e-05
                     -TTSSS-EEEEEE-SS-EEEEEE-T..TT--EEEEECS-SCCCT..S-SSSCHHHHHHHHHHHHHHHC CS
  Ribosomal_L18p  19 sgtaerprlvvfrsnrhiyaQvidd..vkgktlasastlekelk..lkstknkeaakkvgeliAerak 82 
                     + +a + rlvv  snr++  Qvi +  + + +la+a + e      +    n +aa + g l+A+ra+
      EPX72323.1  43 KYNAPKYRLVVRFSNRFVTCQVISSrvTGDYVLAAAHSSELPRYgiKWGLANWSAAYATGLLVARRAL 110
                     3455688****************873356789999988776544444667899999999999999997 PP

>> Thr_synth_N  Threonine synthase N terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1     6e-05      0.27      23      40 ..     166     183 ..     154     244 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 6e-05
  Thr_synth_N  23 AeDgGLyvPeeiPklsae 40 
                  A+DgGLyvP++  ++   
   EPX72323.1 166 ASDGGLYVPHSPSRFPGY 183
                  99******9865544333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (294 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       663  (0.0369792); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2131.99
//
Query:       EPX72324.1  [L=293]
Description: SR family protein Srp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.5e-13   48.1   0.0    1.2e-12   47.5   0.0    1.2  1  RRM_1        RNA recognition motif. (a.k.a. RRM, RBD, or RNP 
    0.00018   21.4   0.0    0.00026   20.9   0.0    1.3  1  Nup35_RRM_2  Nup53/35/40-type RNA recognition motif


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.5   0.0   1.3e-16   1.2e-12       1      64 [.       9      72 ..       9      74 .. 0.96

  Alignments for each domain:
  == domain 1  score: 47.5 bits;  conditional E-value: 1.3e-16
                EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEE CS
       RRM_1  1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkkl 64
                l+V+++   +  +eL   F++fGp ++++++  +t++s++fafVe+e+++dAe+A  +++g+ l
  EPX72324.1  9 LYVTGFRDGLRARELAYEFEPFGPLVRCDIPIPRTRSSRPFAFVEYEDSRDAEDAYYEVHGRRL 72
                7999999999***************************************************987 PP

>> Nup35_RRM_2  Nup53/35/40-type RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0   2.9e-08   0.00026       2      53 .]       7      64 ..       6      64 .. 0.91

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 2.9e-08
  Nup35_RRM_2  2 twvaVsGydtelielVleh.FasfGeIvkhyvp.....kevsvmyvkfesekdaekAL 53
                 ++  V+G+  +l++  l++ F+ fG+ v+ ++p     +++++++v++e+++dae A+
   EPX72324.1  7 RTLYVTGFRDGLRARELAYeFEPFGPLVRCDIPiprtrSSRPFAFVEYEDSRDAEDAY 64
                 7889*********7777766999***************99***************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1040  (0.0580066); expected 358.6 (0.02)
Passed bias filter:                      326  (0.0181828); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 2145.96
//
Query:       EPX72325.1  [L=187]
Description: 60S ribosomal protein L18 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.3e-89  295.9   6.5    9.2e-89  295.8   6.5    1.0  1  Ribosomal_L18   Ribosomal protein 60S L18 and 50S L18e
    3.4e-06   27.7   0.2    3.2e-05   24.6   0.2    2.3  1  Ribosomal_L27A  Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27


Domain annotation for each model (and alignments):
>> Ribosomal_L18  Ribosomal protein 60S L18 and 50S L18e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  295.8   6.5     1e-92   9.2e-89       1     187 []       2     187 .]       2     187 .] 0.98

  Alignments for each domain:
  == domain 1  score: 295.8 bits;  conditional E-value: 1e-92
  Ribosomal_L18   1 gidlkekkkkkskrkapksenvylklLvklyrfLarRtdskFnkvvlkrLfmsrinrpplslsrlvkkvkkkee..ekkiavvvgtvtdDvrllev 94 
                    gid+++++ +ks+r++p senvylklLvklyrfLarRtds+Fnk++lkrLf+s++nrpp+s+s++++ +++k++  e+k++v vgtvtdD+r+l+v
     EPX72325.1   2 GIDIERHHVRKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKTILKRLFQSKTNRPPISISKIAALTSRKASdlEGKTVVTVGTVTDDERMLTV 97 
                    89**88888**********************************************************999988889******************** PP

  Ribosomal_L18  95 PklsvaALrftetararilkaGGeiltlDqLalraPtGkntvLlrGkkkareavkhfgaapgvphshkkpyvrskgrkfekargrrksrgfkv 187
                    PklsvaALrft++ararilkaGGe++tlDqLalraPtG+ntvLlrG+k+area++hfg+   +ph+hk p+vrs+grkfe+argrrksr+fkv
     EPX72325.1  98 PKLSVAALRFTKSARARILKAGGEVMTLDQLALRAPTGSNTVLLRGRKHAREAFRHFGF---GPHKHKAPHVRSEGRKFERARGRRKSRAFKV 187
                    **********************************************************9...*****************************96 PP

>> Ribosomal_L27A  Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.2   3.6e-09   3.2e-05      35     127 ..      47     123 ..      29     124 .. 0.74

  Alignments for each domain:
  == domain 1  score: 24.6 bits;  conditional E-value: 3.6e-09
                     ....---GGG..---EEEEHHHHHHTTTTGTTS------EEEGGGTTTTSSS....SEEEE--S.---.-.-EEEESEE-HHHHHHHHHTT-EEE CS
  Ribosomal_L27A  35 lpkrGfknskfkkeykvvnlkdLdelideerleladeaeeidleelaeaglikkkdgvKvlgkg.eltkk.lkvkaskfSkkAkekIeaaGGkve 127
                     + kr f+   +k+++++++++++  l +++  +l ++++++++ ++                ++  lt + l+v a +f+k+A+++I +aGG+v+
      EPX72325.1  47 ILKRLFQ---SKTNRPPISISKIAALTSRKASDL-EGKTVVTVGTV--------------TDDErMLTVPkLSVAALRFTKSARARILKAGGEVM 123
                     3344443...45899*********9999998875.37899999999..............333325566449*********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       450  (0.025099); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1435.17
//
Query:       EPX72326.1  [L=174]
Description: hypothetical protein SOCG_00091 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       545  (0.0303977); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.21s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1336.24
//
Query:       EPX72327.1  [L=283]
Description: KRE9 family cell wall biosynthesis protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-13   50.9   6.8    4.6e-13   49.8   6.8    1.5  1  KRE9      Yeast cell wall synthesis protein KRE9/KNH1


Domain annotation for each model (and alignments):
>> KRE9  Yeast cell wall synthesis protein KRE9/KNH1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.8   6.8   2.6e-17   4.6e-13       9      82 ..     169     244 ..     166     260 .. 0.92

  Alignments for each domain:
  == domain 1  score: 49.8 bits;  conditional E-value: 2.6e-17
        KRE9   9 YtkQtgktrfAPmQtqPgtkvta..ttwsrrfptsavtyystlkksleqltTiTpgwsytltsavNyatpapfpse 82 
                 Y +Qtg++r  PmQ++Pg+  ta  t++sr ++ts+++ ++++ + +  ++T+ pg syt+t  +Nya++a+ p  
  EPX72327.1 169 YLQQTGRIRTGPMQQRPGSVFTAqtTSFSRLWETSSYSVFKKYGSLPYPTSTVQPGASYTYTLYANYASTASSPVV 244
                 99*****************9998446799******************************************99965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (283 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       377  (0.0210274); expected 358.6 (0.02)
Passed bias filter:                      312  (0.017402); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 2025.71
//
Query:       EPX72328.1  [L=1115]
Description: tubulin specific chaperone cofactor D [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.7e-16   58.9   0.3    2.5e-13   50.3   0.0    3.3  3  TFCD_C    Tubulin folding cofactor D C terminal
  ------ inclusion threshold ------
      0.022   15.0   7.5        1.1    9.7   0.0    5.0  5  HEAT      HEAT repeat
      0.099   13.0   0.1         12    6.4   0.0    3.1  3  HEAT_2    HEAT repeats
       0.13   12.5   0.5        0.8    9.9   0.0    2.6  2  RTP1_C1   Required for nuclear transport of RNA pol II C-term
       0.21   12.1   1.1         11    6.7   0.0    3.9  4  HEAT_EZ   HEAT-like repeat


Domain annotation for each model (and alignments):
>> TFCD_C  Tubulin folding cofactor D C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.7   0.0    0.0066        24      82     141 ..      17      82 ..      14      94 .. 0.72
   2 ?   -3.3   0.0       1.9   6.8e+03      19      36 ..     179     218 ..     179     255 .. 0.54
   3 !   50.3   0.0   6.9e-17   2.5e-13       3     187 ..     828    1012 ..     827    1014 .. 0.86

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.0066
      TFCD_C  82 svleGlvvSvGglteslvka........ssqaLleylkeleskadeeeleslleeliklleenkkddR 141
                 + l+G++ S+G++ +sl++a          +  ley++ +  +++++ l+++l++++ +l+++ +++ 
  EPX72328.1  17 KFLSGFIYSIGSFCKSLETAddpsgkqrLCDEVLEYVQGC--QQQPTLLDKILSKYVPILSSYVHSNE 82 
                 6789999999999999987622221111334455666555..559*****************999886 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.9
      TFCD_C  19 RavAgkvlqrllhndpa......................k 36 
                 R++A  vl+rll  +++                      k
  EPX72328.1 179 REAASLVLARLLSRQDCvhllpnilqstidlwdsknlfyK 218
                 7778888888888888855554444444444444444443 PP

  == domain 3  score: 50.3 bits;  conditional E-value: 6.9e-17
      TFCD_C    3 iigallkqavEKiDrvRavAgkvlqrllhndpakipsiphreelekifpeeeeedlnwnspsevfprlvqLLqlpeyresvleGlvv.SvGgltesl 98  
                  i++ +++qa++KiD++R+ A ++l +l ++     p +++ e l++ ++++ + +++   + +     +++L+ p++re+ ++G+v+ +  g++++ 
  EPX72328.1  828 IFSFMVRQAFDKIDNLRLLALQCLNDLRRH-----PVLKYDEGLQNTIQNSYTCEIESFKKFKKEDSKIRFLECPAFREDAFKGIVTfTGNGFGDGK 919 
                  67889************************9.....7899*****99998885555555555556666899****************989999****9 PP

      TFCD_C   99 vkassqaLleylkeles......kadeeeleslleeliklleenkkddRvvvPllktldlLlesgvleelaeeessflekllkllqkelkksknv 187 
                  v ++ +   +y+++l +      +++e + ++++e +ik l+++++d+R ++ ++++++ L  sg++e++++++   + +++ l+q++++k+++ 
  EPX72328.1  920 VFFCYNGYKHYVRKLIDfrdeshSEHELSKQDIFELYIKFLTSKEEDNRSYYQVVSSFTSLSLSGIFEKFISSK--PVIRVAFLAQQRATKCTST 1012
                  9999988888887776655443344555556******************************************9..4999999999999999875 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.3       3.5   1.2e+04      17      29 ..     179     191 ..     179     192 .. 0.89
   2 ?    9.7   0.0   0.00031       1.1       1      30 [.     315     344 ..     315     345 .. 0.92
   3 ?    4.9   0.0     0.011        39       2      27 ..     460     485 ..     459     488 .. 0.89
   4 ?    0.8   0.1      0.22     8e+02       6      27 ..     833     854 ..     828     854 .. 0.78
   5 ?   -2.1   0.0         2     7e+03       9      22 ..    1045    1058 ..    1043    1060 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 3.5
                 HHHHHHHHHHHHH CS
        HEAT  17 ReaAakaLgalae 29 
                 ReaA + L++l++
  EPX72328.1 179 REAASLVLARLLS 191
                 99******99976 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00031
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalaev 30 
                 ++++ll+  + ++ +VR +Aak L++++e 
  EPX72328.1 315 IIDFLLSSVEYSDTFVRWSAAKGLARIVER 344
                 68899999999****************985 PP

  == domain 3  score: 4.9 bits;  conditional E-value: 0.011
                 HHHHHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgal 27 
                 ++ll++ l D + ++R+aA  aL ++
  EPX72328.1 460 INLLQTVLFDREVNIRRAATAALFEI 485
                 7899999**************99766 PP

  == domain 4  score: 0.8 bits;  conditional E-value: 0.22
                 HHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   6 lkllsDpspeVReaAakaLgal 27 
                 ++   D+  + R  A+++L +l
  EPX72328.1 833 VRQAFDKIDNLRLLALQCLNDL 854
                 55567889999********886 PP

  == domain 5  score: -2.1 bits;  conditional E-value: 2
                  HT-SSHHHHHHHHH CS
        HEAT    9 lsDpspeVReaAak 22  
                  l ++  +VR  Aa 
  EPX72328.1 1045 LAHSRENVRLQAAD 1058
                  5678899*****96 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0    0.0034        12      30      58 ..     313     341 ..     307     361 .. 0.83
   2 ?    2.7   0.0     0.047   1.7e+02      33      63 ..     460     491 ..     438     501 .. 0.82
   3 ?   -2.9   0.0       2.5   9.1e+03      40      53 ..    1045    1058 ..    1039    1060 .. 0.58

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0034
      HEAT_2  30 pealpaLvellededpavRraaaeaLgai 58 
                 +e+++ L++ +e +d+ vR+ aa+ L++i
  EPX72328.1 313 EEIIDFLLSSVEYSDTFVRWSAAKGLARI 341
                 57899999999999999999999999987 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.047
      HEAT_2  33 lpaLvellededpavRraaaeaLgai.gdpea 63 
                 +++L  +l d + ++Rraa  aL +i g++++
  EPX72328.1 460 INLLQTVLFDREVNIRRAATAALFEIvGRHAS 491
                 67788888899999999999999665366555 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 2.5
      HEAT_2   40 lededpavRraaae 53  
                  l ++ ++vR +aa+
  EPX72328.1 1045 LAHSRENVRLQAAD 1058
                  44555555555554 PP

>> RTP1_C1  Required for nuclear transport of RNA pol II C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0   0.00022       0.8      35      82 ..     309     356 ..     289     372 .. 0.86
   2 ?   -2.2   0.1       1.3   4.6e+03      29      65 ..     940     978 ..     930     983 .. 0.66

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00022
     RTP1_C1  35 vldiekilkllleaLkdedsYvYLnaikgLvaLadvfpeevlklLlee 82 
                 ++ +e+i++ ll++++ +d++v  +a kgL+ ++++ p    ++++++
  EPX72328.1 309 HTYLEEIIDFLLSSVEYSDTFVRWSAAKGLARIVERLPWYLAEQVIDA 356
                 566899*****************************9998777777665 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1.3
     RTP1_C1  29 kkskeavldiekilkllleaLk..dedsYvYLnaikgLv 65 
                 ++++e +l+++ i++l ++ L+  +ed   Y ++++ ++
  EPX72328.1 940 ESHSEHELSKQDIFELYIKFLTskEEDNRSYYQVVSSFT 978
                 445568899999999999999844555556666665555 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.1      0.32   1.2e+03       3      29 ..     178     202 ..     177     207 .. 0.75
   2 ?    6.7   0.0     0.003        11      22      55 .]     308     341 ..     300     341 .. 0.92
   3 ?   -2.3   0.0         2     7e+03       2      11 ..     473     482 ..     460     488 .. 0.78
   4 ?   -0.8   0.0      0.67   2.4e+03      14      52 ..     813     851 ..     798     854 .. 0.78

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.32
     HEAT_EZ   3 vRraAawaLGrlaggepellqplvpei 29 
                 +R+aA ++L+rl+   ++++  l+p i
  EPX72328.1 178 EREAASLVLARLL--SRQDCVHLLPNI 202
                 69********976..466666666666 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.003
     HEAT_EZ  22 lqplvpeilpaLlalLnddsdeVRaaAagaLgnl 55 
                 ++++++ei+++Ll+  + ++  VR+ Aa  L+++
  EPX72328.1 308 VHTYLEEIIDFLLSSVEYSDTFVRWSAAKGLARI 341
                 799*************************999886 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 2
     HEAT_EZ   2 rvRraAawaL 11 
                 ++RraA +aL
  EPX72328.1 473 NIRRAATAAL 482
                 4677777776 PP

  == domain 4  score: -0.8 bits;  conditional E-value: 0.67
     HEAT_EZ  14 laggepellqplvpeilpaLlalLnddsdeVRaaAagaL 52 
                 l ++   ll+ +v+ i  ++++   d+ d+ R  A+ +L
  EPX72328.1 813 LDSQFQKLLKSQVSLIFSFMVRQAFDKIDNLRLLALQCL 851
                 5666778899999********999999999999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1115 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       536  (0.0298957); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.72u 0.28s 00:00:01.00 Elapsed: 00:00:00.44
# Mc/sec: 7605.50
//
Query:       EPX72329.1  [L=628]
Description: spindle pole body protein Ndc80 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      2e-53  180.1   1.3    3.2e-53  179.5   0.0    2.0  2  Ndc80_HEC     HEC/Ndc80p family
     0.0037   17.3   5.5     0.0037   17.3   5.5    3.3  3  Laminin_II    Laminin Domain II
     0.0054   16.8   4.3     0.0054   16.8   4.3    4.3  4  DUF5595       Domain of unknown function (DUF5595)
     0.0063   16.8   6.3     0.0063   16.8   6.3    4.7  4  CCDC-167      Coiled-coil domain-containing protein 167
     0.0076   16.3   4.8     0.0076   16.3   4.8    3.4  2  Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C
  ------ inclusion threshold ------
      0.018   14.6  40.5       0.22   11.0  22.7    2.2  2  Leu_zip       Leucine zipper
      0.093   12.3  41.5      0.042   13.4  10.0    2.2  2  MscS_porin    Mechanosensitive ion channel porin domain
        0.2   11.5  38.6      0.022   14.6  18.6    3.3  2  DASH_Spc19    Spc19
          7    6.0  43.5       0.21   11.0   7.8    3.2  3  Golgin_A5     Golgin subfamily A member 5
          8    5.8  18.7       0.61    9.5  10.6    2.5  2  DUF4349       Domain of unknown function (DUF4349)


Domain annotation for each model (and alignments):
>> Ndc80_HEC  HEC/Ndc80p family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  179.5   0.0   1.8e-56   3.2e-53       2     151 ..      76     225 ..      75     227 .. 0.94
   2 ?   -2.9   0.5       2.5   4.5e+03       9      40 ..     339     370 ..     323     383 .. 0.70

  Alignments for each domain:
  == domain 1  score: 179.5 bits;  conditional E-value: 1.8e-56
   Ndc80_HEC   2 rrssvns.stskasffsesekaasverDprplrdksfqseliqellefLkennfehsisaktlksPsqkdfssifkfLykrldpsyefqkkieeevvki 99 
                 rrss+++ ++s+asf+ ++++++s  +Dprpl dk++q+e+   +++fL e+++++++ +++   P++k+f+sifkfLy+++dp+++f +++ee+v+++
  EPX72329.1  76 RRSSIMNrRMSSASFMGQATSTSS-MKDPRPLTDKRYQQECSAYVVNFLLECGYPQPLAPNNRFLPTTKEFASIFKFLYNKMDPKFRFGNRYEEDVINC 173
                 788877758889999999988755.5************************************************************************* PP

   Ndc80_HEC 100 lkelrYPfaesisKsqlaAvgtphtwptllaaLhWlvelaklleelsesktd 151
                 lk+lrYPf++sis+s+l+A+gtph+wp +l++LhWlv l++++e+  + +++
  EPX72329.1 174 LKNLRYPFIDSISRSRLVAIGTPHSWPAILGMLHWLVCLIQCTEQAVDMAYS 225
                 ********************************************99887776 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2.5
   Ndc80_HEC   9 stskasffsesekaasverDprplrdksfqse 40 
                 ++ ++s+ ++ ++ ++ +++++ l+ +  +++
  EPX72329.1 339 KQIQLSLSEKEAQLHELNEKKKSLKSRVDMQS 370
                 56677777777777777777777777766554 PP

>> Laminin_II  Laminin Domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   4.7    0.0035       6.3      28      92 ..     263     327 ..     253     333 .. 0.85
   2 ?    0.5   9.7      0.32   5.7e+02       4      97 ..     323     420 ..     321     434 .. 0.76
   3 !   17.3   5.5     2e-06    0.0037      10      95 ..     486     569 ..     479     596 .. 0.91

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0035
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTTTTGGGHHHHHHHHHH...HHHHH CS
  Laminin_II  28 ntkeklseinrsveetnekvkdankairdArrsvkkLeklapqLldklkelkqleeassslsdni 92 
                 ++k++ +e n++++   +++++ n  +   +++  +L+ +++ L++++k+++  e++ +s   +i
  EPX72329.1 263 ELKASFEEQNKEINTKIQLLQQENDELLKQKQAAGDLDSTIELLEERFKTMQRDEVKLQSFMSSI 327
                 567777788888777788889************************************99844444 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.32
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XX--TTTTTGGGHHHHHHHHHH....HHHHHHHHHH CS
  Laminin_II   4 laaeanetakevleqlaplsqnlentkeklseinrsveetnekvkdankairdArrsvk...kLeklapqLldklkelkqleeasss.lsdniseike 97 
                 +++++++ +++    +++++  l++ +++l+e+n++ +  +  v+  +  +++ ++ v+   +L+++++ + +++ el++    +   +  +i+ i +
  EPX72329.1 323 FMSSIQSRMESKTTLKKQIQLSLSEKEAQLHELNEKKKSLKSRVDMQSVSTVEYQKMVSeqeQLDRNINSIGNRITELRKEVFDKDLlVQSKIDTIEK 420
                 5677888888888899********************9999999985555555555544322289999*******999998877755577888888765 PP

  == domain 3  score: 17.3 bits;  conditional E-value: 2e-06
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTTTTGGGHHHHHHHHHH....HHHHHHHH CS
  Laminin_II  10 etakevleqlaplsqnlentkeklseinrsveetnekvkdankairdArrsvkkLeklapqLldklkelkqleeasss.lsdnisei 95 
                 ++  +v+e+l +l+  + +++++l++i++     n++vk+ ++  ++A+++   L+ + ++L+  l++lk  + +s   l + i+ i
  EPX72329.1 486 NKSLKVQEVLDALNDSVAELQDELNTIESR---LNAVVKECTMLRESANQEKTSLNAESQKLEHDLQQLKLSSHNSMLqLDQRIQTI 569
                 44568*************************...9***********************************988888554899999887 PP

>> DUF5595  Domain of unknown function (DUF5595)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       5.8     1e+04      30      48 ..     137     155 ..     128     159 .. 0.81
   2 !   16.8   4.3     3e-06    0.0054       8      64 ..     235     290 ..     228     296 .. 0.88
   3 ?    1.6   1.2      0.17     3e+02      24      67 ..     323     366 ..     320     370 .. 0.78
   4 ?    0.5   1.0      0.37   6.7e+02      37      71 ..     511     545 ..     498     552 .. 0.66

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 5.8
     DUF5595  30 tFeeedaeleskLkelynv 48 
                  F ++ +e+ s +k lyn 
  EPX72329.1 137 RFLPTTKEFASIFKFLYNK 155
                 5778889999999999985 PP

  == domain 2  score: 16.8 bits;  conditional E-value: 3e-06
     DUF5595   8 evnkLFldYtvkcYekFmqgeDtFeeedaeleskLkelynvdeaqlesleeeekrLe 64 
                  vnk ++dY+v  Y+ F+q   + ee ++el++ ++e ++ ++++++ l++e+  L 
  EPX72329.1 235 FVNKTLFDYLVRKYHLFLQASMD-EEPEQELKASFEEQNKEINTKIQLLQQENDELL 290
                 4899***************8754.88899***********************98775 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.17
     DUF5595  24 FmqgeDtFeeedaeleskLkelynvdeaqlesleeeekrLeeEi 67 
                 Fm    +  e ++ l+ +++  +   eaql +l+e++k L+  +
  EPX72329.1 323 FMSSIQSRMESKTTLKKQIQLSLSEKEAQLHELNEKKKSLKSRV 366
                 55555566677777888888888889*************99755 PP

  == domain 4  score: 0.5 bits;  conditional E-value: 0.37
     DUF5595  37 eleskLkelynvdeaqlesleeeekrLeeEierle 71 
                  +es+L+ +++      es ++e++ L+ E ++le
  EPX72329.1 511 TIESRLNAVVKECTMLRESANQEKTSLNAESQKLE 545
                 45666666666666666677777777777776666 PP

>> CCDC-167  Coiled-coil domain-containing protein 167
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?  -10.7  16.4        10   1.8e+04       6      63 ..     303     357 ..     258     364 .. 0.52
   2 ?   -0.7   8.5         1   1.8e+03       6      64 ..     345     403 ..     340     424 .. 0.90
   3 ?   -0.9   0.0       1.2   2.2e+03       2      17 ..     411     426 ..     410     429 .. 0.87
   4 !   16.8   6.3   3.5e-06    0.0063       3      70 ..     492     560 ..     490     563 .. 0.84

  Alignments for each domain:
  == domain 1  score: -10.7 bits;  conditional E-value: 10
    CCDC-167   6 IdkleeklascrerLeaverrlrkeelseee..........R.esleeEeaslkeqleenekeLksLrk 63 
                 I+ lee+ + ++++                +          R es ++ +++++  l+e+e +L++L +
  EPX72329.1 303 IELLEERFKTMQRDEV--------------KlqsfmssiqsRmESKTTLKKQIQLSLSEKEAQLHELNE 357
                 3333333333333222..............122222222112022224446666677788888887754 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 1
    CCDC-167   6 IdkleeklascrerLeaverrlrkeelseeeResleeEeaslkeqleenekeLksLrke 64 
                 +++ e +l++++e+ +++ +r+  +++s+ e +++  E+++l  ++++  ++ ++Lrke
  EPX72329.1 345 LSEKEAQLHELNEKKKSLKSRVDMQSVSTVEYQKMVSEQEQLDRNINSIGNRITELRKE 403
                 56778899999999999999999**********************************99 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 1.2
    CCDC-167   2 vaseIdkleeklascr 17 
                 v+s+Id++e++ +++ 
  EPX72329.1 411 VQSKIDTIEKECQRYS 426
                 7899*****9999885 PP

  == domain 4  score: 16.8 bits;  conditional E-value: 3.5e-06
    CCDC-167   3 aseIdkleeklascrerLeaverrlrke..elseeeResleeEeaslkeqleenekeLksLrkeNrksml 70 
                 ++ +d l++++a+++++L+++e+rl+ +  e +   Res+++E++sl+ + ++ e  L++L+     sml
  EPX72329.1 492 QEVLDALNDSVAELQDELNTIESRLNAVvkECTM-LRESANQEKTSLNAESQKLEHDLQQLKLSSHNSML 560
                 556799*******************986214444.4*************************987777776 PP

>> Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.5  12.5        10   1.8e+04      18      63 ..     320     368 ..     261     406 .. 0.55
   2 !   16.3   4.8   4.3e-06    0.0076      13      98 ..     486     570 ..     464     588 .. 0.89

  Alignments for each domain:
  == domain 1  score: -5.5 bits;  conditional E-value: 10
  Baculo_PEP_C  18 LtnvLnairlq...nvqilaqlatlldaietqLnalsedlksllaeldt 63 
                   L   +++i++    ++++  q++  l + e qL++l+e+ ksl + +d 
    EPX72329.1 320 LQSFMSSIQSRmesKTTLKKQIQLSLSEKEAQLHELNEKKKSLKSRVDM 368
                   3444444443311134555555555555555555555555555555554 PP

  == domain 2  score: 16.3 bits;  conditional E-value: 4.3e-06
  Baculo_PEP_C  13 nqfldLtnvLnairlqnvqilaqlatlldaietqLnalsedlksllaeldt...rldtlltnLtdalnalqdtlrneLtnlnsiltnLl 98 
                   n+ l + +vL+a+   n ++ a+l+  l++ie++Lna+ ++ + l ++ ++    l++ +++L++ l++l+ + +n +  l++ + +++
    EPX72329.1 486 NKSLKVQEVLDAL---NDSV-AELQDELNTIESRLNAVVKECTMLRESANQektSLNAESQKLEHDLQQLKLSSHNSMLQLDQRIQTIT 570
                   7788899999999...9999.******************9998887666555569****************999999988888888776 PP

>> Leu_zip  Leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0  22.7   0.00012      0.22      50     245 ..     226     424 ..     212     430 .. 0.72
   2 ?    9.5   9.9   0.00035      0.64     134     227 ..     494     596 ..     459     624 .. 0.49

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00012
     Leu_zip  50 vesELintshtnvLllrqlfsqAEkwhLklqaDiselenReLlEkiaefEekefkssnkkeseelkkkkL.ePlneg....GgaeLLkkeierLkeene 143
                 ve++ +n  ++n  l+  l+    k+hL lqa + e    eL    a+fEe++ + ++k +  ++++  L +  + +     ++eLL+   + ++ +  
  EPX72329.1 226 VENDTLNDHFVNKTLFDYLV---RKYHLFLQASMDEEPEQELK---ASFEEQNKEINTKIQLLQQENDELlKQKQAAgdldSTIELLEERFKTMQRDEV 318
                 66667777777777777665...59*********999999885...78999999998877755555444313333332222589*************** PP

     Leu_zip 144 kLkerlkelEkqatsaleeksklekalkelqkelgekkdekenskeiskleeklaelkldlektleektasaksleedlastkhel....LkvqeqLel 238
                 kL++ + ++ ++++s    k++++ +l+e++++l+e +++k++ k+  ++++  +   +++ +++e+  ++ +s+ + +++ ++e+    L vq+++++
  EPX72329.1 319 KLQSFMSSIQSRMESKTTLKKQIQLSLSEKEAQLHELNEKKKSLKSRVDMQSVSTVEYQKMVSEQEQLDRNINSIGNRITELRKEVfdkdLLVQSKIDT 417
                 ******************************999999888888555555555544444444445555555555555555555555542222669999999 PP

     Leu_zip 239 aekeLek 245
                  eke ++
  EPX72329.1 418 IEKECQR 424
                 9999775 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00035
     Leu_zip 134 eierLkeenekLkerlkelEkqatsaleeksklekalkelqkelgekkdeke.........nskeiskleeklaelkldlektleektasaksleedla 223
                  ++ L++    L++ l+++E++++ +++e ++l+++ ++ +++l++++++ e         +++++ +l+++++ ++++ ++  ++  + ++ + +++a
  EPX72329.1 494 VLDALNDSVAELQDELNTIESRLNAVVKECTMLRESANQEKTSLNAESQKLEhdlqqlklsSHNSMLQLDQRIQTITIEADQLAHACMEYKNGIYKEVA 592
                 234455555555555555555555555555555555544444444444333300000001133555566666666666666655555555444444444 PP

     Leu_zip 224 stkh 227
                  +  
  EPX72329.1 593 YMLS 596
                 4444 PP

>> MscS_porin  Mechanosensitive ion channel porin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5  23.5     0.012        22      78     219 ..     259     409 ..     250     421 .. 0.64
   2 ?   13.4  10.0   2.3e-05     0.042      87     184 ..     481     576 ..     474     590 .. 0.88

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.012
  MscS_porin  78 lsleeLeqrllqtssqlqelqeqlaqlnsqlvelqtrperaqqqltearqrlqei..............rnrLnstaaagealsqaqrtalqaelaale 162
                  + +eL    ++++ +  +  + l+q+n++l ++ ++   + +++    +r +++              ++r +s+        + q ++   e +a  
  EPX72329.1 259 EPEQELKASFEEQNKEINTKIQLLQQENDELLKQKQAAGDLDSTIELLEERFKTMqrdevklqsfmssiQSRMESK-----TTLKKQIQLSLSEKEAQL 352
                 4555555555555555555555555555555555555555555555555555554222111111100004444444.....555555555556666777 PP

  MscS_porin 163 aqieeleqellsnnnrqeLlklqrdllklriqqleqelqaLqellnekRlaeaekav 219
                  +++e +++l+s   +q+ ++ + + +  +++ql+++++ + +++ e R++  +k +
  EPX72329.1 353 HELNEKKKSLKSRVDMQSVSTVEYQKMVSEQEQLDRNINSIGNRITELRKEVFDKDL 409
                 77888999******************************************9988877 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 2.3e-05
  MscS_porin  87 llqtssqlqelqeqlaqlnsqlvelqtrperaqqqltearqrlqeirnrLnstaaagealsqaqrtalqaelaaleaqieeleqellsnnnrqeLlkl 184
                   +++++ +++qe l  ln++++elq+ ++++ ++l +  ++ + +r   n+    ++  +++q+     ++  l++ +++l++ +  ++  +e  +l
  EPX72329.1 481 FHEEQNKSLKVQEVLDALNDSVAELQDELNTIESRLNAVVKECTMLRESANQE--KTSLNAESQKLEHDLQQLKLSSHNSMLQLDQRIQTITIEADQL 576
                 5689999999**************************************77777..5558899999999******************999988887776 PP

>> DASH_Spc19  Spc19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6  18.6   1.3e-05     0.022      46     155 ..     260     367 ..     259     368 .. 0.84
   2 ?    1.7  10.3      0.12   2.1e+02      64     127 ..     490     553 ..     410     582 .. 0.68

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1.3e-05
                 -TTTHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH......HHHHT-XXXXXXXXXXXX....XXXXXXXXXXXXXXXXX CS
  DASH_Spc19  46 pesdleaakaslaeeiePqieellekaekeleklerreetLkaklelqegrlsnaesskkeeeeseeskeeeeeeenkeeekskkkltkeelerlkkLk 144
                 pe++l+a  ++ ++ei+ +i+ l ++ ++el k+++    L +++el+e r + +++++ + ++  +s + ++ e++++ +k+++ + +e++++l++L 
  EPX72329.1 260 PEQELKASFEEQNKEINTKIQLL-QQENDELLKQKQAAGDLDSTIELLEERFKTMQRDEVKLQSFMSSIQ-SRMESKTTLKKQIQLSLSEKEAQLHELN 356
                 899999999***********865.5567888899999*****************8666666666665555.66666677777788899*********** PP

                 XXXXXXXXXXX CS
  DASH_Spc19 145 qkKerLkytle 155
                 +kK++Lk +++
  EPX72329.1 357 EKKKSLKSRVD 367
                 *******9986 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.12
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH......HHHHT-XXXXXXXXXXXX.... CS
  DASH_Spc19  64 qieellekaekeleklerreetLkaklelqegrlsnaesskkeeeeseeskeeeeeeenkeeek 127
                 +++e l+ +++++++l+ + +t++++l+   +     ++s+++e++s ++++++ e++ ++ + 
  EPX72329.1 490 KVQEVLDALNDSVAELQDELNTIESRLNAVVKECTMLRESANQEKTSLNAESQKLEHDLQQLKL 553
                 3556666666666666666666666666666666666555555555555555555544444333 PP

>> Golgin_A5  Golgin subfamily A member 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7  18.8      0.44   7.8e+02      76     175 ..     263     362 ..     253     364 .. 0.80
   2 ?    5.5   6.6    0.0056        10      22      98 ..     347     425 ..     345     429 .. 0.84
   3 ?   11.0   7.8   0.00012      0.21      76     176 ..     469     570 ..     452     609 .. 0.66

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.44
   Golgin_A5  76 elqdleaqqqaeaeslreqlqeleeqleeerkakeeveaelerlkeelryleeelvrskatlqsrikdrekeieklrnqlttk.slsssseselesRlk 173
                 el+   ++q++e+++  + lq+ +++l ++++a  ++++ +e l+e +++++ + v+  ++++s i+ r +    l++q++ + s ++++ +el+++ k
  EPX72329.1 263 ELKASFEEQNKEINTKIQLLQQENDELLKQKQAAGDLDSTIELLEERFKTMQRDEVKL-QSFMSSIQSRMESKTTLKKQIQLSlSEKEAQLHELNEKKK 360
                 55554556668888888999999999999999999****************9999965.5788999999999999999999885666667778877766 PP

   Golgin_A5 174 qL 175
                 +L
  EPX72329.1 361 SL 362
                 65 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.0056
   Golgin_A5  22 sKekliasLke..gsgeeglesstalsaeldelkqerdllreelqklnqqieqlrtelqdleaqqqaeaeslreqlqel 98 
                  Ke  +++L e  +s ++ ++ + ++++e++++ +e+++l  ++++  ++i +lr+e+ d +  +q+ +++++++ q++
  EPX72329.1 347 EKEAQLHELNEkkKSLKSRVDMQSVSTVEYQKMVSEQEQLDRNINSIGNRITELRKEVFDKDLLVQSKIDTIEKECQRY 425
                 6777777776622557788889999*********************************999999999999999888776 PP

  == domain 3  score: 11.0 bits;  conditional E-value: 0.00012
   Golgin_A5  76 elqdleaqqqaeaeslreqlqeleeqleeerkakeeveaelerlkeelryleeelvrskatlqsrikdrekeieklrnqlttkslsss.seselesRlk 173
                  l+++ ++ ++e+++ +++  +++e l++ + +  e+++el+ ++  l+++ +e +  +++ +++ +  ++e +kl+++l++ +lss  s  +l++R++
  EPX72329.1 469 FLNQVRHSITMEFHEEQNKSLKVQEVLDALNDSVAELQDELNTIESRLNAVVKECTMLRESANQEKTSLNAESQKLEHDLQQLKLSSHnSMLQLDQRIQ 567
                 455555555556666555555666666666666666666666666666666666666666555555556666666665555443333225667777777 PP

   Golgin_A5 174 qLt 176
                 ++t
  EPX72329.1 568 TIT 570
                 665 PP

>> DUF4349  Domain of unknown function (DUF4349)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5  10.6   0.00034      0.61      72     169 ..     287     390 ..     271     406 .. 0.78
   2 ?    0.5   1.0       0.2   3.5e+02     116     141 ..     492     518 ..     478     584 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00034
     DUF4349  72 gkvtsrstsaeDVTeqyvDleaRlkaleasedrllallek.aksvedlleiere....LsevqaeieslegqlryLdnqvaystv.tvtlrepeaetea 164
                  ++ ++++ a D+ +++  le R k+ +  e +l+++++  ++++e   +++++    Lse +a++ +l  + ++L+++v++++v tv++++ ++e+e+
  EPX72329.1 287 DELLKQKQAAGDLDSTIELLEERFKTMQRDEVKLQSFMSSiQSRMESKTTLKKQiqlsLSEKEAQLHELNEKKKSLKSRVDMQSVsTVEYQKMVSEQEQ 385
                 56667788888888888889******************8868888887766654333389***********************9966888888777776 PP

     DUF4349 165 eeeeg 169
                  + ++
  EPX72329.1 386 LDRNI 390
                 65554 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.2
     DUF4349 116 edll.eiereLsevqaeieslegqlry 141
                 +++l ++++ ++e q e++ +e++l++
  EPX72329.1 492 QEVLdALNDSVAELQDELNTIESRLNA 518
                 444423455666777777777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (628 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2634  (0.146913); expected 358.6 (0.02)
Passed bias filter:                      601  (0.0335211); expected 358.6 (0.02)
Passed Vit filter:                        94  (0.0052429); expected 17.9 (0.001)
Passed Fwd filter:                        58  (0.00323498); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 1.17u 0.36s 00:00:01.52 Elapsed: 00:00:00.53
# Mc/sec: 3541.05
//
Query:       EPX72330.1  [L=638]
Description: contractile ring protein Imp2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.2e-13   48.3   1.6    1.5e-12   47.6   0.1    2.2  2  FCH          Fes/CIP4, and EFC/F-BAR homology domain
    1.5e-10   40.5   0.2    3.6e-10   39.3   0.2    1.7  1  SH3_1        SH3 domain
    3.3e-10   39.7   0.1    5.7e-10   38.9   0.1    1.4  1  SH3_9        Variant SH3 domain
    9.4e-09   34.8   0.1    1.8e-08   33.9   0.1    1.5  1  SH3_2        Variant SH3 domain
  ------ inclusion threshold ------
       0.16   11.4   2.0       0.27   10.7   2.0    1.3  1  DUF769       Xylella fastidiosa protein of unknown function (
          7    6.7  12.2         10    6.1   5.5    3.0  3  Prefoldin_2  Prefoldin subunit


Domain annotation for each model (and alignments):
>> FCH  Fes/CIP4, and EFC/F-BAR homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.6   0.1   5.1e-16   1.5e-12       1      76 [.      29     100 ..      29     101 .. 0.94
   2 ?   -2.5   0.2       2.3   6.7e+03      36      66 ..     181     212 ..     175     219 .. 0.66

  Alignments for each domain:
  == domain 1  score: 47.6 bits;  conditional E-value: 5.1e-16
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT----TT-.....HHHHHHHHHHHHHHHHHHHHHH CS
         FCH   1 gfkvlqkrleqgialledlqeflkeRaeiEkeYakkLqkLakkylkrrkkkseestlvtawtvlleeteklaqshl 76 
                 g+ +l++r +     +edl++f+ eRa+iE++Yak++ kLa++  +      e +tl+++ + +++e++ +++++l
  EPX72330.1  29 GYHALLSRFSEIKHINEDLRSFFHERASIEEDYAKRMTKLARSNVGAN----ETGTLRESIQMMKSEMDTMGKNRL 100
                 788999999**********************************99965....569******************997 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 2.3
                 HHHHHCT----TT.-.....HHHHHHHHHHHH CS
         FCH  36 kLqkLakkylkrr.kkkseestlvtawtvlle 66 
                 kL+k  + ++++  + k++ +t++++++  + 
  EPX72330.1 181 KLNKTQNAIASSAsEYKASVQTISDTYQRWIR 212
                 56666666666655566677777777776655 PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.3   0.2   1.2e-13   3.6e-10       2      48 .]     582     630 ..     581     630 .. 0.94

  Alignments for each domain:
  == domain 1  score: 39.3 bits;  conditional E-value: 1.2e-13
                 ESSSBEXSSTTBXEBSTTEEEEEEEECSSSEEEEEETTS..TEEEEEEG CS
       SH3_1   2 AlYDYeaeesdELsfkkGDviivleksedgWwkgrlkgt..gkeGliPs 48 
                 AlY+Y+a  ++E+sf+kGD+i v++  edgWw+g + g+  + +G +Ps
  EPX72330.1 582 ALYNYDAAIPEEISFQKGDTIAVIKLYEDGWWEGFVVGDddHNRGQFPS 630
                 9************************9999*****998888888999997 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.9   0.1   1.9e-13   5.7e-10       1      48 [.     582     633 ..     582     634 .. 0.92

  Alignments for each domain:
  == domain 1  score: 38.9 bits;  conditional E-value: 1.9e-13
       SH3_9   1 AlypyepreddeLsLqrGDvitvieesedgWlegs....ltGrtGlvPanyv 48 
                 Aly+y++  ++e+s+q+GD+i vi+ +edgW+eg      + ++G +P+n+v
  EPX72330.1 582 ALYNYDAAIPEEISFQKGDTIAVIKLYEDGWWEGFvvgdDDHNRGQFPSNFV 633
                 8*********************************54553599*********9 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   0.1     6e-12   1.8e-08       1      55 [.     579     634 ..     579     636 .. 0.84

  Alignments for each domain:
  == domain 1  score: 33.9 bits;  conditional E-value: 6e-12
                 EEEESS-B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEECCCE....EEEEGCGEE CS
       SH3_2   1 yvraiedyvgedkseLsfkkGdvikvlslgskdsdgwwegevgGrv....GlfPsslve 55 
                 yv a+ +y+++ ++e+sf+kGd+i+v+   +   dgwweg v G +    G fPs++v+
  EPX72330.1 579 YVHALYNYDAAIPEEISFQKGDTIAVI---KLYEDGWWEGFVVGDDdhnrGQFPSNFVR 634
                 677888*********************...5566799***7745555667*******98 PP

>> DUF769  Xylella fastidiosa protein of unknown function (DUF769)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   2.0   8.9e-05      0.27     149     242 ..     115     209 ..      63     222 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 8.9e-05
      DUF769 149 savsesvegvikagvalveagikerksar.nlikvertekrygnavtllkaylpnpvGdglealmtpigktgyykavklklieaarlkdkedrqr 242
                 s  ++s++ + k+ +a +e+  ke++s++ n++k++ + ++  + v ++  +++  vG++le   +   kt + +a+    ++a  ++  + +qr
  EPX72330.1 115 SRFAISLKDKKKTIIASIEKCHKEKESKKqNYEKAQDKYHYLCKKVNYYVSQQNMLVGKDLERNNSKLNKTQNAIASSASEYKASVQTISDTYQR 209
                 6679999999*************999976267778888889999999999999999*********99************9999999999999997 PP

>> Prefoldin_2  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       3.1   9.2e+03      10      23 ..      81      94 ..      75     106 .. 0.54
   2 ?    6.1   5.5    0.0034        10      67      99 ..     121     153 ..     118     159 .. 0.92
   3 ?    3.5   0.1     0.023        69      48      97 ..     163     212 ..     156     221 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 3.1
                 HHHHHHHHHHHHHH CS
  Prefoldin_2 10 lqqqlqqlaqqikq 23
                 l++ +q++++++++
   EPX72330.1 81 LRESIQMMKSEMDT 94
                 33344444444333 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0034
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Prefoldin_2  67 Leerketlekeiktlekqleklekeleelkeel 99 
                  L+++k+t+ + i+++ k++e++++++e+ +++ 
   EPX72330.1 121 LKDKKKTIIASIEKCHKEKESKKQNYEKAQDKY 153
                  99****************************986 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.023
                  EEEETTEEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Prefoldin_2  48 yklvGdvlvkqdkeevkeeLeerketlekeiktlekqleklekeleelke 97 
                  y +  ++lv +d+e  +++L+++++ +    ++++ + +++  +++ +  
   EPX72330.1 163 YVSQQNMLVGKDLERNNSKLNKTQNAIASSASEYKASVQTISDTYQRWIR 212
                  55566899999999999999999999999999999999999998887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (638 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1869  (0.104245); expected 358.6 (0.02)
Passed bias filter:                      620  (0.0345808); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.69u 0.31s 00:00:01.00 Elapsed: 00:00:00.46
# Mc/sec: 4194.61
//
Query:       EPX72331.1  [L=64]
Description: hypothetical protein SOCG_05547 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.045   12.9   0.0      0.046   12.8   0.0    1.1  1  PHTB1_C   PTHB1 C-terminus


Domain annotation for each model (and alignments):
>> PHTB1_C  PTHB1 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   2.6e-06     0.046      94     127 ..       9      42 ..       5      57 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2.6e-06
     PHTB1_C  94 qPvKeakhkltldtnkspvsLaelFpefleqeee 127
                 + vK+a+hk+t+++++    ++++F +  + +++
  EPX72331.1   9 STVKDADHKVTYNIERVRHGINNFFDDVGSAVKK 42 
                 569************************9765333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (64 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       710  (0.0396006); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 482.27
//
Query:       EPX72332.1  [L=878]
Description: GTPase regulator [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (878 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       470  (0.0262145); expected 358.6 (0.02)
Passed bias filter:                      324  (0.0180713); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.66u 0.29s 00:00:00.95 Elapsed: 00:00:00.46
# Mc/sec: 5701.38
//
Query:       EPX72333.1  [L=483]
Description: U2-associated protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00012   22.9   0.0    0.00031   21.5   0.0    1.8  1  CTD_bind  RNA polymerase II-binding domain.


Domain annotation for each model (and alignments):
>> CTD_bind  RNA polymerase II-binding domain.
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   1.7e-08   0.00031       1      58 [.     280     347 ..     280     348 .. 0.80

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 1.7e-08
    CTD_bind   1 kLnllYLaNdvlqnskrkq...kdefapaFapvlpeafadayk.....kap....ekikkklkrllniWe 58 
                 kL llY++Nd+l n  + +      ++ +++p + ++f ++y+     +      +  +kk+ +++++W+
  EPX72333.1 280 KLGLLYVINDLLFNGIS-GvplVWRYRISLEPSISSIFDHLYAfsrrlG-GrlkmDMFCKKVAQVIDVWR 347
                 8************9833.23454557899*************9866551.05666899***********5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (483 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       784  (0.043728); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 3473.45
//
Query:       EPX72334.1  [L=531]
Description: ATP-dependent RNA helicase dbp3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.7e-50  169.5   0.0      2e-49  167.7   0.0    1.8  2  DEAD            DEAD/DEAH box helicase
    2.5e-33  114.7   0.1    2.3e-29  102.0   0.1    2.8  3  Helicase_C      Helicase conserved C-terminal domain
    7.4e-07   29.3   5.1      2e-06   27.9   0.0    2.8  2  ResIII          Type III restriction enzyme, res subunit
    4.4e-06   26.1   0.1    4.4e-06   26.1   0.1    2.2  1  ERCC3_RAD25_C   ERCC3/RAD25/XPB C-terminal helicase
     0.0021   17.4   0.0     0.0021   17.4   0.0    2.6  1  CMS1            U3-containing 90S pre-ribosomal complex subun
  ------ inclusion threshold ------
      0.068   13.0   2.4      0.089   12.6   2.4    1.2  1  Band_3_cyto     Band 3 cytoplasmic domain
      0.074   13.3   0.3       0.48   10.7   0.1    2.5  2  AAA_22          AAA domain
      0.077   13.1   3.1       0.17   12.0   3.1    1.6  1  DDHD            DDHD domain
        0.2   10.4  14.9       0.29    9.9  14.9    1.1  1  Presenilin      Presenilin
       0.49    9.1  14.6       0.75    8.5  14.6    1.2  1  Tim54           Inner membrane protein import complex subunit
        1.6    7.9  10.9        2.3    7.4  10.9    1.2  1  Zip             ZIP Zinc transporter
        1.9    8.8   8.9        3.3    8.0   8.9    1.3  1  Dsh_C           Segment polarity protein dishevelled (Dsh) C 
        2.4    6.8  16.9        3.3    6.4  14.0    2.0  2  SAPS            SIT4 phosphatase-associated protein
        4.9    7.1  17.8        8.2    6.4  17.8    1.2  1  FAM60A          Protein Family FAM60A
        7.6    4.9  19.3         12    4.3  19.3    1.2  1  Borrelia_P83    Borrelia P83/100 protein


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  167.7   0.0   1.7e-52     2e-49       1     174 [.     141     312 ..     141     314 .. 0.97
   2 ?   -1.3   0.0       1.4   1.7e+03      36     104 ..     356     425 ..     352     441 .. 0.65

  Alignments for each domain:
  == domain 1  score: 167.7 bits;  conditional E-value: 1.7e-52
                 -HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHS.TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   1 tdiQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyet.kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngv 98 
                 t+iQa+++p +  g+dv++ aeTGsGKT af ip+lq + +  k+k+++++l+v+PtreLa qt++n+k +++ +  +v +++gg ++++q+++  +++
  EPX72334.1 141 TPIQAASWPYLFAGRDVVGIAETGSGKTVAFGIPALQYLQNLpKEKPTTRILVVSPTRELAIQTYENIKGLTSDTMFKVAVVYGGAPKNEQVRAA-RDA 238
                 89*************************************877*9*****************************9999******************.99* PP

                 SEEEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  99 divvgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkdvk 174
                  +++gtpgrl+dl+++g +++s+v +lVlDEadr+ld gf+++i++i++q+p+  + g   rq+++ SAT+p++v+
  EPX72334.1 239 SVIIGTPGRLLDLINDGAVDCSNVGYLVLDEADRMLDTGFEQDIRNIISQTPDPLKGGA--RQTVFYSATWPESVR 312
                 ***************************************************99999888..66*********8886 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 1.4
                 HHHHHHS..TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHH.TTCSEEEEE CS
                 xxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxx RF
        DEAD  36 lqivyet..kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskld.ngvdivvgt 104
                 ++i++++    k+g k+l+ +  ++ a  + n+l ++++ +++     +++ a+ + l+ ++ n+  ++v+t
  EPX72334.1 356 INIISKNlaSAKQGDKILVFVLYKKEAARVENTLARRFNAVGIHGD--MSQGARIQALESFKsNKSPVLVAT 425
                 4444444446788888888888888888888888888887553322..333344444444443557777777 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0   0.00099       1.2       4      60 ..     177     236 ..     174     244 .. 0.77
   2 ?   -2.0   0.0       3.6   4.4e+03      44      85 ..     300     341 ..     282     349 .. 0.71
   3 !  102.0   0.1   1.9e-32   2.3e-29       3     111 .]     356     463 ..     350     463 .. 0.89

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00099
                 HHHHHHHHHTTTTSEEEEEESSHH...HHHH...HHHHHHHTTSTEEEESTTSTHHHHHHHHH CS
  Helicase_C   4 eallellkleeeggkilifvntid...rlek...vklllekkgikvavlhgelpqnereeile 60 
                 ++l +l  +e+ + +il++++t++   +      +k l++   +kvav++g  p+ne+ ++ +
  EPX72334.1 177 QYLQNL-PKEKPTTRILVVSPTRElaiQ--TyenIKGLTSDTMFKVAVVYGGAPKNEQVRAAR 236
                 455555.5899*************8442..3335666666669**************987765 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 3.6
                 EEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTE CS
  Helicase_C  44 avlhgelpqnereeileqfnkgesdvLiatdvaerGidipkv 85 
                 +v+++ +  ++ +   + f k+ +++ i +d ++ + +i+++
  EPX72334.1 300 TVFYSATWPESVRSLAATFLKDPVKITIGSDELSASQNITQI 341
                 455555566666666777777778888888888888777765 PP

  == domain 3  score: 102.0 bits;  conditional E-value: 1.9e-32
                 HHHHHHHHHHTTTTSEEEEEESSHHHHHH.HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHHH CS
  Helicase_C   3 leallellkleeeggkilifvntidrlek.vklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvtsy 100
                 ++++ + l + ++g+kil+fv +++++ +  + l   + ++++ +hg+++q  r+++le+f++++s vL+atdva+rG+dipkv+lVin+ +p ++++y
  EPX72334.1 356 INIISKNLASAKQGDKILVFVLYKKEAARvENTL--ARRFNAVGIHGDMSQGARIQALESFKSNKSPVLVATDVAARGLDIPKVQLVINVTFPLTIEDY 452
                 45555666899**************776533555..4569*********************************************************** PP

                 HHHHTTSSSTT CS
  Helicase_C 101 iqriGRtgRag 111
                 i+riGRtgRa+
  EPX72334.1 453 IHRIGRTGRAN 463
                 *********96 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   0.0   1.7e-09     2e-06      31     154 ..     161     283 ..     152     308 .. 0.82
   2 ?   -2.0   0.0       2.7   3.2e+03      50      71 ..     365     386 ..     339     463 .. 0.53

  Alignments for each domain:
  == domain 1  score: 27.9 bits;  conditional E-value: 1.7e-09
                 ESTTSTHHHHHHHHHHHH-S.........-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--.......-SEEEEEHHHHHHTH....... CS
      ResIII  31 maTGtGKTlvaaklierllkkgkee....kflflvprkslleqtleefkkflseaykeigkkvsgdkkkakekdstnkkilvttiqsldadseeeeees 125
                 ++TG+GKT+     + ++l++ ++e    ++l++ p+++l  qt+e++k ++s++  ++  ++ g  k+++ +++ ++++++ t  +l   +     ++
  EPX72334.1 161 AETGSGKTVAFGIPALQYLQNLPKEkpttRILVVSPTRELAIQTYENIKGLTSDTMFKVAVVYGGAPKNEQVRAARDASVIIGTPGRLLDLI-----ND 254
                 68********9666666666666666999*************************99888888999888888999***********9999999.....67 PP

                 .HHHTTT-SEEEEETGGGTTS.TTTHH.HH CS
      ResIII 126 eellrdrfdviiiDEaHrlgakkswre.il 154
                    + ++  +++ DEa r+ + + +++ i 
  EPX72334.1 255 GAVDCSNVGYLVLDEADRMLD-TGFEQdIR 283
                 777777777999999988887.44444343 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 2.7
                 S.....-EEEEESSHHHHHHHH CS
      ResIII  50 kkgkeekflflvprkslleqtl 71 
                 ++++ +k+l++v  k+   + +
  EPX72334.1 365 SAKQGDKILVFVLYKKEAARVE 386
                 3333335555543333222222 PP

>> ERCC3_RAD25_C  ERCC3/RAD25/XPB C-terminal helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.1   3.7e-09   4.4e-06      57     154 ..     366     465 ..     335     474 .. 0.81

  Alignments for each domain:
  == domain 1  score: 26.1 bits;  conditional E-value: 3.7e-09
  ERCC3_RAD25_C  57 ekrgDkiivfs....DnvfaLkeyakklkkpyiyGetseaerlkilqkfkknpkvntiflskvgDtsiDlPeanvliqisshfgsrrqeaqrlGri 148
                     k+gDki+vf     +     +++a++++   i+G++s+  r++ l++fk+n k  +++   v+   +D+P+ + +i + +  +       r+Gr 
     EPX72334.1 366 AKQGDKILVFVlykkEAARVENTLARRFNAVGIHGDMSQGARIQALESFKSN-KSPVLVATDVAARGLDIPKVQLVINVTFPLTI-EDYIHRIGRT 459
                    578******97332123333456788888999******************98.56788999******************998765.4567888888 PP

  ERCC3_RAD25_C 149 Lrakkk 154
                     ra +k
     EPX72334.1 460 GRANTK 465
                    888766 PP

>> CMS1  U3-containing 90S pre-ribosomal complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   1.8e-06    0.0021     153     209 ..     216     269 ..     175     277 .. 0.69

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 1.8e-06
        CMS1 153 dskvakLFakhikleesvtylkksrigiavGtpgRildLleeeslsvdeLkrivlDa 209
                  +kva +++   k +e+v   + +  ++ +GtpgR+ldL++++++ ++++ ++vlD 
  EPX72334.1 216 MFKVAVVYGGAPK-NEQVRAARDA--SVIIGTPGRLLDLINDGAVDCSNVGYLVLDE 269
                 4566666665555.5566655554..5779*************************96 PP

>> Band_3_cyto  Band 3 cytoplasmic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   2.4   7.5e-05     0.089      41     127 ..       4      94 ..       1     195 [. 0.54

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 7.5e-05
                  SSHHHHHHHHHCHCCCTTSS-HHHHHHHHHHHTS-EE-CCH.......HHHHT-EEE-EE-TTS---------...-EE--SSS-SS-HHHHHHTTT CS
  Band_3_cyto  41 kslaavadrvvdqlviedqlkeedreevlraLLlkhrHqne.......ekekgvllptvrslssigsllsekk...kaskellskqssleteeakas 127
                  +s+++v d+ +++ v  +++k++++++       kh+H+++       +k+k+  +  +r+  s ++++s++    ++++++++kq s + ++ +a+
   EPX72334.1   4 RSIKEVKDTDLEKKVEGENVKPKEKKSS------KHEHKKQkktseksDKKKKDKKEKKRKEKSEAESTSQEGesnGEEEKTTPKQDSSQSTTNEAA 94 
                  6777777777888888888887777764......455555411111111222222222222222222222111111222222222222221111111 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1    0.0004      0.48      11     106 ..     160     279 ..     157     302 .. 0.59
   2 ?   -1.8   0.0       2.8   3.4e+03      51      87 ..     331     364 ..     287     377 .. 0.58

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.0004
      AAA_22  11 tGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsst..sskdllrellralglelka..........................erlsseellea 81 
                 ++e+G+GKT+     + q+ +   +  +++++ ++ + s+t     + ++++   +     +                            ++  +ll++
  EPX72334.1 160 IAETGSGKTVAFGIPALQYLQN-LP--KEKPTTRILVVSPTreLAIQTYENIKGLTS----DtmfkvavvyggapkneqvraardasvIIGTPGRLLDL 251
                 5788888888865555555321.11..233333333333330012222222222222....12333555555555556888888888878899999999 PP

      AAA_22  82 leqalraravielliiDEaqh.lr.s.e 106
                 +++ + +++ ++ l++DEa++ l+   e
  EPX72334.1 252 INDGAVDCSNVGYLVLDEADRmLDtGfE 279
                 9999999999***********6633133 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 2.8
      AAA_22  51 t.sskdllrellralglelkaerlsseellealeqalr 87 
                 + s ++  +++++ l+++    r +++ l++ + ++l 
  EPX72334.1 331 ElSASQNITQIVELLNDS----REKERTLINIISKNLA 364
                 333333334444444433....3335555555555555 PP

>> DDHD  DDHD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   3.1   0.00014      0.17     128     170 ..      29      82 ..       3     190 .. 0.57

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00014
        DDHD 128 aslaessksherasesskasqeskaaesstasssaksskaee...........k 170
                 +s++ ++k+++++se+s++++++k++++++++s+a+s+++e            k
  EPX72334.1  29 KSSKHEHKKQKKTSEKSDKKKKDKKEKKRKEKSEAESTSQEGesngeeekttpK 82 
                 222222222222222222222222222222222222111111222222222221 PP

>> Presenilin  Presenilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9  14.9   0.00024      0.29     235     326 ..      23     134 ..       4     137 .. 0.28

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00024
  Presenilin 235 seeeeeaekkkeeasesskeeeseeesseksaqsseseeeseeesseaessaeesseekeseessesseeeeeeeeeeeeses................ 317
                  + +e++++k+e++++++++e+s++++++k++++    +++++e+++++++ e++ ee++++++++ss+++++e+  +e  ++                
  EPX72334.1  23 VKPKEKKSSKHEHKKQKKTSEKSDKKKKDKKEKK----RKEKSEAESTSQEGESNGEEEKTTPKQDSSQSTTNEAARKEYAKEheinyldplsktpllp 117
                 1112222222222222222222222111111111....1111111222222222222222222222222222222211111111233444444444444 PP

  Presenilin 318 ........eergvkLGL 326
                          ++ ++LGL
  EPX72334.1 118 lldfselpIHDNLRLGL 134
                 44443333224666665 PP

>> Tim54  Inner membrane protein import complex subunit Tim54
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5  14.6   0.00063      0.75     192     291 ..      24     126 ..      14     130 .. 0.61

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00063
       Tim54 192 kpeepeeeeaeeeeeeeeeekeeeeeee..eeeeeekeeekeeekeeeeeeeekekkkkvpkpyispedYasaelppeiPell.qpvlviplphllGfl 287
                 kp+e+++++ e++++++++ek+++++++  e++++ek+e++++++e e++ ee+++++k+ ++  ++++ a++e+++e  + + +p+   pl  ll f 
  EPX72334.1  24 KPKEKKSSKHEHKKQKKTSEKSDKKKKDkkEKKRKEKSEAESTSQEGESNGEEEKTTPKQDSSQSTTNEAARKEYAKEHEINYlDPLSKTPLLPLLDFS 122
                 444444433333333333333333333211233333344444444555555555667777788889999999999999888777999999999999999 PP

       Tim54 288 ntpi 291
                 ++pi
  EPX72334.1 123 ELPI 126
                 8886 PP

>> Zip  ZIP Zinc transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4  10.9    0.0019       2.3     104     171 ..      27      94 ..       5     148 .. 0.60

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0019
         Zip 104 sshkektpkkasssssesaakksvsndkveeseekedhvaeadtdadskeelrngkqeksesekeqas 171
                 ++++ k ++k+++++se+++kk+ ++++ + +e++e + ++++++ + +ee+   kq++s+s++++a+
  EPX72334.1  27 EKKSSKHEHKKQKKTSEKSDKKKKDKKEKKRKEKSEAESTSQEGESNGEEEKTTPKQDSSQSTTNEAA 94 
                 33333333333334444444444444444444444444444444444444444444444444444443 PP

>> Dsh_C  Segment polarity protein dishevelled (Dsh) C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   8.9    0.0028       3.3      69     137 ..      30      99 ..      19     127 .. 0.61

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0028
       Dsh_C  69 gsqhsegsrssgsnrsegkakreaskeekerkag.gsgsesesstrssvsrrerekaqserssaaasers 137
                 +s+h   ++ ++s++s++k+k++++k+ ke++ + +++ e es+ +++ ++ +++++qs ++ aa+ e +
  EPX72334.1  30 SSKHEHKKQKKTSEKSDKKKKDKKEKKRKEKSEAeSTSQEGESNGEEEKTTPKQDSSQSTTNEAARKEYA 99 
                 6788888888899999888766666655554433244444444444443334344444444333333333 PP

>> SAPS  SIT4 phosphatase-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4  14.0    0.0027       3.3     262     346 ..      12      98 ..       2     138 .. 0.46
   2 ?    1.1   0.0      0.11   1.3e+02      75     140 ..     307     370 ..     283     424 .. 0.57

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0027
        SAPS 262 tseeealedvsdeaskeesaesedltdkdedvsleesksakdenkesdesesdtaeesseeded..dasseesalaeeteeklrkkp 346
                 t++e+++e  + ++++++s+++e++++k+++ +++++k++k+e+k +++se++++++++e++ +  ++++++   +++t+e+ rk++
  EPX72334.1  12 TDLEKKVEGENVKPKEKKSSKHEHKKQKKTSEKSDKKKKDKKEKKRKEKSEAESTSQEGESNGEeeKTTPKQDSSQSTTNEAARKEY 98 
                 333444444444444444444444444444444444444444444444444444444444443300333444445566666666332 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.11
        SAPS  75 esediqssasdfLkaiItis..anatanlqssigpneLtreLvseeivekLikimlkgksgsalvngv 140
                 ++e+++s a+ fLk+ ++i   ++  ++ q+ ++  eL+++  s+e  ++Li+i+ k+   ++  +g 
  EPX72334.1 307 WPESVRSLAATFLKDPVKITigSDELSASQNITQIVELLND--SREKERTLINIISKN--LASAKQGD 370
                 55566666666666654333003333332222222222222..222223333333333..33333333 PP

>> FAM60A  Protein Family FAM60A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4  17.8    0.0068       8.2      84     160 ..      22      98 ..       3     123 .. 0.46

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0068
      FAM60A  84 glkslaklkkkekkesskkieekfekklkkkkklkktkakasdasssereaspassdsa.sedsdesedeeekkrkkl 160
                 ++k  +k  +k++++++kk++ek +kk+k kk++k++++++++++s+e e+  ++++++ ++ds++s+++e+  rk+ 
  EPX72334.1  22 NVKPKEKKSSKHEHKKQKKTSEKSDKKKKDKKEKKRKEKSEAESTSQEGESNGEEEKTTpKQDSSQSTTNEAA-RKEY 98 
                 3333333333334444555555555555544444444333333333333333333332202222222222222.2222 PP

>> Borrelia_P83  Borrelia P83/100 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3  19.3      0.01        12     267     380 ..      10     119 ..       3     137 .. 0.57

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.01
  Borrelia_P83 267 sskkedkkvaeekkreiekaqkeikkkdeeakkakdakaedlkkeskaeekeaedkeleakkereevaeDlqkikeevkakktseaedaidssnPvy 363
                   +++  +kkv+ e+ +  ek      k++++ +k + +k+++ kk+ k+ +k+ e+ e+e+  +  e  ++  k+ +++ + + + +e+a++     +
    EPX72334.1  10 KDTDLEKKVEGENVKPKEK---KSSKHEHKKQKKTSEKSDKKKKDKKE-KKRKEKSEAESTSQEGESNGEEEKTTPKQDSSQSTTNEAARKEYAKEH 102
                   3333444444333333333...23333333444444444444444443.444477777777777777777777777777777777777777666666 PP

  Borrelia_P83 364 gLkvvDaiklLselvLi 380
                    ++ +D+      l L+
    EPX72334.1 103 EINYLDPLSKTPLLPLL 119
                   66666666555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (531 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2996  (0.167104); expected 358.6 (0.02)
Passed bias filter:                     1137  (0.0634168); expected 358.6 (0.02)
Passed Vit filter:                       374  (0.0208601); expected 17.9 (0.001)
Passed Fwd filter:                        74  (0.00412739); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 1.17u 0.37s 00:00:01.54 Elapsed: 00:00:00.51
# Mc/sec: 3154.97
//
Query:       EPX72335.1  [L=371]
Description: hypothetical protein SOCG_00099 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (371 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       330  (0.0184059); expected 358.6 (0.02)
Passed bias filter:                      155  (0.00864521); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 2550.93
//
Query:       EPX72336.1  [L=268]
Description: exosome subunit Rrp43 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-24   87.3   0.0    1.7e-24   86.8   0.0    1.3  1  RNase_PH    3' exoribonuclease family, domain 1
    1.5e-09   37.8   0.0    2.4e-09   37.1   0.0    1.3  1  RNase_PH_C  3' exoribonuclease family, domain 2


Domain annotation for each model (and alignments):
>> RNase_PH  3' exoribonuclease family, domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.8   0.0   1.9e-28   1.7e-24       1     132 []      40     175 ..      40     175 .. 0.91

  Alignments for each domain:
  == domain 1  score: 86.8 bits;  conditional E-value: 1.9e-28
                 EEEEEEEEESSSSTTSEEEEEEECCEEEEEEEEEEEEEE-TCCG--CCEEEECCCCECCCCEC-C...S...HHHHHHHHHHHHHHCCTC-C....... CS
    RNase_PH   1 elRslsietgvlsqanGSaylelGdtkvlasvtgpieerpseerddaegaldveveyapfasgerrregrpsdeeielsrlleralrpsill....... 92 
                 e+R+ +++t+ +s anGSa+++ G++  +++++++i e p ++++d +g ++ +ve+ p++  +++  g psd ++ +s+ l+++l +  l+       
  EPX72336.1  40 EFREPQVHTDCISTANGSAIVRAGENVFVCGIKAEIAE-PTADAPD-QGFIVPNVELGPLCNSKFKP-GPPSDLAQVISQQLYQILIKTKLIhlhslci 135
                 79**********************************99.6666543.478***************77.9***********9988887777766677777 PP

                 .CGCCTCEEEEEEEEEECCCS-CHHHCHHHHHHHHHCTCEE CS
    RNase_PH  93 .ekkpkstididitvlssdggslldalinaaslALadagip 132
                  ekk+ + ++ di +l++dg + +d +++a++ AL ++++p
  EPX72336.1 136 hEKKAVWVLYADIVCLNYDG-NAFDHAWTALMSALETTKLP 175
                 888999**************.******************98 PP

>> RNase_PH_C  3' exoribonuclease family, domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.1   0.0   2.6e-13   2.4e-09       7      65 ..     206     264 ..     203     266 .. 0.95

  Alignments for each domain:
  == domain 1  score: 37.1 bits;  conditional E-value: 2.6e-13
                 EEEEETTEEEES--HHHHHHSSEEEEEEEETTSEEEEEEEECSSCEEHHHHHHHHHHHH CS
  RNase_PH_C   7 tvgkvddqfvlDptkeEedlsegdltlavagtkevvtlmkeggsqldeetlleaielAk 65 
                 + +++++ ++ Dpt eE +ls+  lt++++++k++  + k+ggs +  ++l+e++e+A 
  EPX72336.1 206 SWSVFNNILLADPTDEEVSLSNEFLTIMMDTSKNISKITKLGGSFIQVDKLKECVEFAR 264
                 78899****************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (268 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       563  (0.0314016); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.28s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 1869.65
//
Query:       EPX72337.1  [L=275]
Description: upstream activation factor complex subunit Acr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00017   21.8   1.6    0.00032   20.9   0.1    2.3  3  RRN9      RNA polymerase I specific transcription initiation 
  ------ inclusion threshold ------
       0.33   11.4   2.4        0.7   10.3   0.4    2.2  2  HrpB2     Bacterial type III secretion protein (HrpB2)


Domain annotation for each model (and alignments):
>> RRN9  RNA polymerase I specific transcription initiation factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.1   3.6e-08   0.00032       1      59 [.      48     101 ..      48     110 .. 0.82
   2 ?   -2.2   0.0      0.58   5.2e+03      15      30 ..     146     161 ..     146     185 .. 0.62
   3 ?   -2.6   0.0      0.81   7.3e+03      55      66 ..     242     253 ..     225     255 .. 0.76

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 3.6e-08
        RRN9   1 LeqlraeDLslHLYnaf.aLkrrlrkaeseeaeaneekeekeqeefvpskrWtAWPlpad 59 
                 L q+ ++ L++ LY+++  Lk+r +      +++ ++ + +++++  p k Wt WP +++
  EPX72337.1  48 LKQETRNELAVQLYFVHeSLKNRGQ------TRNGNDGNVEDKDTKTPRKYWTVWPTRES 101
                 678999***********669*9998......255666667777888899*******9976 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.58
        RRN9  15 nafaLkrrlrkaesee 30 
                 na +L+r +   +++ 
  EPX72337.1 146 NAMMLRRLAAMLQQKL 161
                 7888888877555544 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 0.81
        RRN9  55 PlpadevPrtde 66 
                 P p ++vP +de
  EPX72337.1 242 PTPDEIVPLEDE 253
                 677777777766 PP

>> HrpB2  Bacterial type III secretion protein (HrpB2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.4   7.8e-05       0.7      22      87 ..     131     196 ..     118     220 .. 0.83
   2 ?    0.5   0.1     0.087   7.8e+02      24      54 ..     238     268 ..     223     274 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 7.8e-05
       HrpB2  22 lmeqakpappsleqsqedsalsklvakqdeelrkvlekvdalaanakemslneiaa.asikvsaeva 87 
                 ++++ k++p s  +  +  +l +l a+  ++l+ +l+ vd +++++    ++e +a  + +v + +a
  EPX72337.1 131 KLQAMKKVP-SSDEYPNAMMLRRLAAMLQQKLECLLDAVDSFRQQQRSRLMQERLAyMDWQVVYGLA 196
                 466667775.788889999*********************************977623556666555 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.087
       HrpB2  24 eqakpappsleqsqedsalsklvakqdeelr 54 
                 e+ +p+p +    ++++++ +++++ +e+l 
  EPX72337.1 238 ESESPTPDEIVPLEDEDMIQRILDTIEEQLH 268
                 5667888888889999999999999998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (275 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       737  (0.0411066); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 1824.55
//
Query:       EPX72338.1  [L=507]
Description: diphthamide biosynthesis protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.7e-92  308.2   0.0    8.3e-92  307.9   0.0    1.1  1  Diphthamide_syn  Putative diphthamide synthesis protein
  ------ inclusion threshold ------
      0.059   13.3   0.0       0.11   12.4   0.0    1.4  1  HIRAN            HIRAN domain


Domain annotation for each model (and alignments):
>> Diphthamide_syn  Putative diphthamide synthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  307.9   0.0   9.3e-96   8.3e-92       1     300 [.      58     368 ..      58     371 .. 0.91

  Alignments for each domain:
  == domain 1  score: 307.9 bits;  conditional E-value: 9.3e-96
  Diphthamide_syn   1 fPegllpdsaeiadil.eefgaevvilgDttYGaCcvdevaaehlgadllvHyGhsclspvdrlpvlYvfveieldvehlvetlkknfkekkki 93 
                      fP++ l d+ ++a+ + e+++a+v +l+Dt YG+Ccvdevaaeh+ ad++vHyG++clsp++rlpvlYvf++ ++d +++v +l+++f+ ++ +
       EPX72338.1  58 FPDEHLADAGRVASLIsEQVDANVQVLADTNYGSCCVDEVAAEHMFADAIVHYGRACLSPTSRLPVLYVFGRLPIDANKMVTNLTDKFDLDSPM 151
                      9***************999*********************************************************************88999* PP

  Diphthamide_syn  94 vlvstiqyahaleevkeeleeegyevvkvp..qsekplspgevlgctspklkee...eeevd....ailyigdgrfhllslmlsnpkl..pvyr 176
                      ++vs++ + ++ +++ + l+e+g++++ +p   +++++++ ev  ct    +     +e+++    +++++g ++ +l+s+++s+ ++  ++ +
       EPX72338.1 152 LIVSDTRWYYCQDTIIQRLKEAGFKTI-IPstLVKREEPDLEVEACTTIPGR-LfrlPENISlgdvSLIFVGPDSPTLTSILMSHYSIvkDFWS 243
                      ********************99**999.552223345556677777544332.134455555666688*****************66446899* PP

  Diphthamide_syn 177 ydpyskklteesydakkllrrRyaaiekakdakkvGiivgtlgvqgrlelverlkkllkeagkksylvlvgelnpakLanfaeidafVlvaCpr 270
                      +dp ++kltees+     lrrRya+++k++da ++Giivgtlgv+++l++++rl+k++ +agkk y++++g+lnpakLanf+ei++fVl+aC +
       EPX72338.1 244 FDPIKGKLTEESSFGGTKLRRRYALVQKCRDAGVIGIIVGTLGVSNYLNVLDRLRKMILNAGKKPYVLAIGKLNPAKLANFQEIECFVLIACGE 337
                      ********************************************************************************************** PP

  Diphthamide_syn 271 lsiddgkeFekPvltpyElevalg.erewte 300
                      +s++d+++F++P++tp+El+ al+ + +w +
       EPX72338.1 338 NSLIDSRDFYRPIVTPFELMKALSsDTSWLN 368
                      ************************9888865 PP

>> HIRAN  HIRAN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   1.3e-05      0.11      50      95 ..     126     170 ..     106     171 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.3e-05
                 EEEEE-HHHHHHHHHHHHTTSSEEEEEESS-TTTEEEEEEEEEEEG CS
       HIRAN  50 eiGrlprevakwlspLldsgfitfegvvvdapeknlkvgltvylsl 95 
                 ++Grlp + +k + +L d+  ++    +v++++ ++++++t++  l
  EPX72338.1 126 VFGRLPIDANKMVTNLTDKFDLDSPMLIVSDTR-WYYCQDTIIQRL 170
                 68*****************99999*********.********9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (507 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       409  (0.0228122); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.33s 00:00:00.84 Elapsed: 00:00:00.46
# Mc/sec: 3308.27
//
Query:       EPX72339.1  [L=506]
Description: transcriptional regulatory protein Spp41 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.1e-21   75.6  10.0    3.1e-21   75.6  10.0    2.4  2  DUF3020   Protein of unknown function (DUF3020)


Domain annotation for each model (and alignments):
>> DUF3020  Protein of unknown function (DUF3020)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.6  10.0   1.8e-25   3.1e-21       1      49 []      90     138 ..      90     138 .. 0.99
   2 ?   -2.5   4.1      0.42   7.6e+03       2      18 ..     141     157 ..     140     166 .. 0.75

  Alignments for each domain:
  == domain 1  score: 75.6 bits;  conditional E-value: 1.8e-25
     DUF3020   1 nkerKkKwreaNkekNkendlrsRvkKrakkkfgkedseeKdsWieeeF 49 
                 n+erKk+wre+N+e+Nk+ndlr+Rv+K+akk+fg e s eK++Wie+eF
  EPX72339.1  90 NRERKKRWREQNEERNKDNDLRCRVNKKAKKLFGGEPSIEKTNWIEAEF 138
                 9***********************************************9 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.42
     DUF3020   2 kerKkKwreaNkekNke 18 
                 + +K+K  e ++  N  
  EPX72339.1 141 RHSKRKEKERASAQNNT 157
                 78999999999988865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (506 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1276  (0.0711696); expected 358.6 (0.02)
Passed bias filter:                      470  (0.0262145); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.26s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 3350.90
//
Query:       EPX72340.1  [L=432]
Description: WDR68 family WD repeat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.4e-12   45.6  12.0     0.0025   18.6   0.4    5.4  5  WD40      WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0   8.2e-05       1.5      16      38 .]     121     141 ..      98     141 .. 0.75
   2 !    8.4   0.7   0.00023       4.1       7      38 .]     162     196 ..     156     196 .. 0.70
   3 !   12.2   0.0   1.4e-05      0.26       6      38 .]     205     239 ..     200     239 .. 0.76
   4 !   18.6   0.4   1.4e-07    0.0025       3      38 .]     311     346 ..     309     346 .. 0.89
   5 ?   -1.3   0.0      0.27   4.8e+03      11      25 ..     405     419 ..     379     426 .. 0.67

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 8.2e-05
                 EEEETTSSEEEEEETTSEEEEEE CS
        WD40  16 lafspdgawlasGsdDgtvriWd 38 
                 l+ ++++++l +++ D+++riW+
  EPX72340.1 121 LSSNDSSKLL-AST-DQKLRIWN 141
                 4455555555.578.*******8 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.00023
                 EESSSS..EEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40   7 ltGHss..vtslafspdgaw.lasGsdDgtvriWd 38 
                  ++Hss   ts+++++  +  ++ +s D t+ +Wd
  EPX72340.1 162 GKTHSSapLTSFDWCKADPSlIIVSSLDTTCTVWD 196
                 578944469***655555554346778*******9 PP

  == domain 3  score: 12.2 bits;  conditional E-value: 1.4e-05
                 EEESSSS.EEEEEEETTSSEEEEE.ETTSEEEEEE CS
        WD40   6 tltGHss.vtslafspdgawlasG.sdDgtvriWd 38 
                  l +H+  v+++af +d+  ++ + + Dg+vr++d
  EPX72340.1 205 QLIAHDReVYDVAFIKDSMHVFVSvGADGSVRMFD 239
                 4789*336***********97533366******98 PP

  == domain 4  score: 18.6 bits;  conditional E-value: 1.4e-07
                 EEEEEESSSSEEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40   3 clrtltGHssvtslafspdgaw.lasGsdDgtvriWd 38 
                 +l +l+G  +v+++++ p+++  las++dD  v++Wd
  EPX72340.1 311 NLSSLRGG-DVNAVSWMPNSRSkLASCGDDSMVHVWD 346
                 67788877.8*****999999988999*********9 PP

  == domain 5  score: -1.3 bits;  conditional E-value: 0.27
                 SSEEEEEEETTSSEE CS
        WD40  11 ssvtslafspdgawl 25 
                 s v+ +++s  ++ +
  EPX72340.1 405 SEVNNISWSGKQDSI 419
                 337778777766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (432 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       287  (0.0160076); expected 358.6 (0.02)
Passed bias filter:                      226  (0.0126053); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 2914.04
//
Query:       EPX72341.1  [L=965]
Description: 19S proteasome regulatory subunit Rpn2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-49  167.4   6.8    3.6e-49  166.8   6.8    1.3  1  RPN2_C    26S proteasome regulatory subunit RPN2 C-terminal d
    1.8e-36  122.8  20.7    1.4e-06   28.5   0.0    9.0  9  PC_rep    Proteasome/cyclosome repeat
    9.2e-12   45.2   0.2    1.2e-07   32.0   0.1    4.3  5  HEAT_2    HEAT repeats
  ------ inclusion threshold ------
        0.1   12.9   2.4        2.6    8.3   0.1    3.3  3  ANAPC3    Anaphase-promoting complex, cyclosome, subunit 3
       0.82    9.9   2.7       0.96    9.7   0.1    2.6  2  TPR_2     Tetratricopeptide repeat
        1.7    8.9   9.2         15    5.9   7.0    2.4  2  Vfa1      AAA-ATPase Vps4-associated protein 1


Domain annotation for each model (and alignments):
>> RPN2_C  26S proteasome regulatory subunit RPN2 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.8   6.8   1.2e-52   3.6e-49       1     160 []     768     930 ..     768     930 .. 0.92

  Alignments for each domain:
  == domain 1  score: 166.8 bits;  conditional E-value: 1.2e-52
                 -BEEEEETTTBEE--EEEEES-TTTTSSS-S--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHG.--------------------------------. CS
      RPN2_C   1 TaiIglnkdLkiPkfefksnakpslFaYPpeleekkekekekvatAvLSttakakarakkkekekeeeekeedkmdvdeekeekekkekekkekekee. 98 
                 Ta+Igln++L+ Pkf+f snakp+lFaYPp++ +++ k+++kv+tAvLStt kakarak++e+ek ++++++d+m+v+++ ee e +++  + +e++  
  EPX72341.1 768 TALIGLNQNLDAPKFNFVSNAKPKLFAYPPKTVQPAAKAVQKVETAVLSTTVKAKARAKRAEREK-QAKETGDEMKVEKKPEEPEADNNAMEIDEEKPe 865
                 9****************************************************************.8899*********88877776666665554445 PP

                 ....--SS----SSEEEEESSSB--TTCCTTEEE-SSSSEEESSS-SSSSEEEEEESSTSSSSSEE CS
      RPN2_C  99 ....ekkkkekektfekleNpaRVlpaQlkyisfkkdsrYkpvkkkgtgGivllkdkkpeeeeelv 160
                     ++ +k++e++ e leN +RV+paQl yisf+ + rY pv+k  tgG+++l d++++++ +l+
  EPX72341.1 866 dvtkSEPAKKEEPKREVLENFTRVVPAQLPYISFNANGRYYPVRK-FTGGVLMLIDRESDKAPDLI 930
                 68878889999**********************************.**************999887 PP

>> PC_rep  Proteasome/cyclosome repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1       2.5   7.4e+03       9      31 ..     228     249 ..     227     251 .. 0.68
   2 !   24.3   0.0   9.2e-09   2.7e-05       2      34 ..     385     416 ..     384     417 .. 0.94
   3 !   28.5   0.0   4.6e-10   1.4e-06       1      33 [.     423     454 ..     423     456 .. 0.92
   4 !    8.1   0.3    0.0013       3.8       1      33 [.     458     490 ..     458     492 .. 0.91
   5 !   25.2   0.2     5e-09   1.5e-05       1      34 [.     493     526 ..     493     527 .. 0.95
   6 ?    4.3   0.0     0.021        64       8      24 ..     570     586 ..     570     597 .. 0.76
   7 ?    2.4   0.0     0.083   2.5e+02       5      30 ..     603     627 ..     600     632 .. 0.68
   8 !   21.0   0.3     1e-07   0.00031       1      33 [.     633     665 ..     633     667 .. 0.83
   9 !   16.0   0.3     4e-06     0.012       1      22 [.     711     731 ..     711     734 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 2.5
                 HCTTSTCHHHHHHHHHHHHHHSS CS
      PC_rep   9 ihaGsgneeaislLkpylsdtsa 31 
                 +h++  +  a +lL ++ s +++
  EPX72341.1 228 VHLNDASV-AAKLLMKLSSQSDD 249
                 67776666.88888888766554 PP

  == domain 2  score: 24.3 bits;  conditional E-value: 9.2e-09
                 HHHHHHHHCTTSTCHHHHHHHHHHHHHHSSHHH CS
      PC_rep   2 AllALGlihaGsgneeaislLkpylsdtsaevr 34 
                 A++ALG+ih G+ n+ a+++L+pyl++ +a ++
  EPX72341.1 385 ATAALGVIHRGYYNQ-AMNILRPYLPEEDAPSS 416
                 99*************.************99875 PP

  == domain 3  score: 28.5 bits;  conditional E-value: 4.6e-10
                 HHHHHHHHHCTTSTCHHHHHHHHHHHHHHSSHH CS
      PC_rep   1 GAllALGlihaGsgneeaislLkpylsdtsaev 33 
                 GA++A+Gli+a++g++ ++++L+++l+ +++e 
  EPX72341.1 423 GAYYAMGLINANHGRG-VTEYLREQLKRSDDET 454
                 9***************.**********888765 PP

  == domain 4  score: 8.1 bits;  conditional E-value: 0.0013
                 HHHHHHHHHCTTSTCHHHHHHHHHHHHHHSSHH CS
      PC_rep   1 GAllALGlihaGsgneeaislLkpylsdtsaev 33 
                 G +l+LGl ++ s++e +++  k++l +++a++
  EPX72341.1 458 GLILGLGLTGMASRDEGLYDAVKTVLFNDNAVA 490
                 569***********************9999986 PP

  == domain 5  score: 25.2 bits;  conditional E-value: 5e-09
                 HHHHHHHHHCTTSTCHHHHHHHHHHHHHHSSHHH CS
      PC_rep   1 GAllALGlihaGsgneeaislLkpylsdtsaevr 34 
                 +A +++Gli++Gs +++ai+ +++y+++t++e++
  EPX72341.1 493 AAGISMGLIMLGSASSTAIDEMLQYAHETQHEKI 526
                 699****************************976 PP

  == domain 6  score: 4.3 bits;  conditional E-value: 0.021
                 HHCTTSTCHHHHHHHHH CS
      PC_rep   8 lihaGsgneeaislLkp 24 
                 l+++G+gn+ +i  L+ 
  EPX72341.1 570 LAYCGTGNSKIIRKLLH 586
                 89*******99888874 PP

  == domain 7  score: 2.4 bits;  conditional E-value: 0.083
                 HHHHHCTTSTCHHHHHHHHHHHHHHS CS
      PC_rep   5 ALGlihaGsgneeaislLkpylsdts 30 
                 ALG i++   +  +is ++ ++++++
  EPX72341.1 603 ALGFICCKDSSV-LISTIELLVDSYN 627
                 9*******5555.7777765555554 PP

  == domain 8  score: 21.0 bits;  conditional E-value: 1e-07
                 HHHHHHHHHCTTSTCHHHHHHHHHHHHHHSSHH CS
      PC_rep   1 GAllALGlihaGsgneeaislLkpylsdtsaev 33 
                 G+++ALG+++a+sg+++a++lL  ++ d +++v
  EPX72341.1 633 GSAIALGIACANSGSNAALELLGRLVEDATDFV 665
                 89******************9966666666665 PP

  == domain 9  score: 16.0 bits;  conditional E-value: 4e-06
                 HHHHHHHHHCTTSTCHHHHHHH CS
      PC_rep   1 GAllALGlihaGsgneeaislL 22 
                 GA+lA+G+i+aG g++ +i+l 
  EPX72341.1 711 GATLAQGIIDAG-GRNVTIALQ 731
                 9***********.***888875 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.0         6   1.8e+04      10      40 ..     248     278 ..     237     280 .. 0.57
   2 ?   -0.7   0.0      0.65   1.9e+03      39      75 ..     373     412 ..     369     415 .. 0.65
   3 !    6.6   0.0    0.0035        10       2      77 ..     441     524 ..     430     532 .. 0.78
   4 !   14.3   0.0   1.4e-05     0.041       5      58 ..     549     607 ..     545     617 .. 0.83
   5 !   32.0   0.1   3.9e-11   1.2e-07       3      85 ..     583     671 ..     581     676 .. 0.76

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 6
      HEAT_2  10 ndpdpevrraairaLgrignpealpaLvell 40 
                 +d++  ++++ +  L + +++e l+ +++ll
  EPX72341.1 248 DDKNLLTAYQLAFDLEDSAPQEFLNSVIDLL 278
                 2334445666677777777777777666665 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.65
      HEAT_2  39 llededpavRraaaeaLgaigd...pealpaLkelldddd 75 
                 +l+ ++ +   +a  aLg i +   ++a ++L+ +l ++d
  EPX72341.1 373 WLSKANNWAKFTATAALGVIHRgyyNQAMNILRPYLPEED 412
                 5666677777777777777653345777777777765554 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.0035
      HEAT_2   2 daLlqalendpdpevrraairaLg....rignpealpaLvellededpavRraaaeaLgai..g..dpealpaLkelldddddd 77 
                 ++L ++l+++ d+ v++  i  Lg      +++ + +a+  +l ++++    aa  ++g i  g  ++ a++  ++++++++++
  EPX72341.1 441 EYLREQLKRSDDETVQYGLILGLGltgmASRDEGLYDAVKTVLFNDNAVAGSAAGISMGLImlGsaSSTAIDEMLQYAHETQHE 524
                 678899999999999999999999876555677888888889999999999999999997744322577888888888887765 PP

  == domain 4  score: 14.3 bits;  conditional E-value: 1.4e-05
      HEAT_2   5 lqalendpdpevrr..aairaLg..rignpealpaLvell.ededpavRraaaeaLgai 58 
                 +++l  d+dp +r+  + + aL+    gn ++++ L+ +  +d + +vRr a+ aLg i
  EPX72341.1 549 IEQLNADSDPVLRYggMFATALAycGTGNSKIIRKLLHVSvSDVNDDVRRVAVCALGFI 607
                 899999*******8779999999555688999999999777999*************98 PP

  == domain 5  score: 32.0 bits;  conditional E-value: 3.9e-11
      HEAT_2   3 aLlqalendpdpevrraairaLgri..gnpea.lpaLvellededpavRraaaeaLg....aigdpealpaLkellddddddvvReaAae 85 
                 +Ll + ++d +++vrr a+ aLg i  ++ ++ + ++  l+++ +p+vR+  a aLg      g+++al++L +l+  d  d+vR+ A +
  EPX72341.1 583 KLLHVSVSDVNDDVRRVAVCALGFIccKDSSVlISTIELLVDSYNPHVRYGSAIALGiacaNSGSNAALELLGRLVE-DATDFVRQGAMI 671
                 78888899***************66224445536666666689*************95443448999***9999886.566777887743 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.1   0.00087       2.6      10      48 ..      58      93 ..      52     104 .. 0.81
   2 ?    1.4   0.1      0.12   3.7e+02      24      70 ..     218     263 ..     203     265 .. 0.70
   3 ?   -0.1   0.0      0.37   1.1e+03      35      49 ..     393     407 ..     374     430 .. 0.77

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00087
                HHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHC CS
      ANAPC3 10 flaerllaaetespedayllAlclylngqykrAyellrk 48
                ++ +r++   +e++ +a+  ++++y +g+y++A++++  
  EPX72341.1 58 MYEDRAF---PERELAALVVSKVYYYLGEYDEALQFALA 93
                5666666...99999999999999999999999998765 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.12
                 HHHHHHHHHHHHTT-HHHHHHHHHCTSHHHC-HHHHHHHHHHHHHTT CS
      ANAPC3  24 edayllAlclylngqykrAyellrkaklnskslgcrylfAqcllkLk 70 
                  d +  ++c  ++++   A +ll k+ +  ++ + ++++ q +++L+
  EPX72341.1 218 PDYFSVGKCVVHLNDASVAAKLLMKL-SSQSDDKNLLTAYQLAFDLE 263
                 56677788888889988899988888.43444466666667777775 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.37
                 HTT-HHHHHHHHHCT CS
      ANAPC3  35 lngqykrAyellrka 49 
                 ++g y++A+++lr++
  EPX72341.1 393 HRGYYNQAMNILRPY 407
                 678899999999887 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.1   0.00032      0.96       9      23 ..      76      90 ..      73      94 .. 0.87
   2 ?   -2.8   0.3       3.3   9.8e+03       3      16 ..     424     437 ..     423     437 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00032
       TPR_2  9 layyklgdyeeAlea 23
                ++yy+lg+y+eAl++
  EPX72341.1 76 KVYYYLGEYDEALQF 90
                68**********986 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 3.3
       TPR_2   3 alynlGlayyklgd 16 
                 a+y++Gl+ ++ g+
  EPX72341.1 424 AYYAMGLINANHGR 437
                 79999999988886 PP

>> Vfa1  AAA-ATPase Vps4-associated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0     0.061   1.8e+02      29      59 ..     215     245 ..     209     266 .. 0.73
   2 ?    5.9   7.0     0.005        15      51     137 ..     795     877 ..     786     906 .. 0.42

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.061
        Vfa1  29 tednkkDffYv..CesHLkDkqFatpivdeeee 59 
                 ++ ++ D+f v  C +HL+D + a ++  + ++
  EPX72341.1 215 EA-EP-DYFSVgkCVVHLNDASVAAKLLMKLSS 245
                 44.43.9999888*******9999887666433 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.005
        Vfa1  51 tpivdeeeeeaakkkkeleeeiekvkkeyeekqkkkkekekkkkekdkkdkdkkkekekdkkkekekeeekkkelkkaeeeleekee 137
                  p ++ + +++a +k e++   + vk++ ++k+++++++ k++    ++ k +kk +e + +++  + +e+k e  +++e +++ ee
  EPX72341.1 795 YPPKTVQPAAKAVQKVETAVLSTTVKAKARAKRAEREKQAKET---GDEMKVEKKPEEPEADNNAMEIDEEKPEDVTKSEPAKK-EE 877
                 5444443333333333333333333443333333333222222...12222222222222222222222222222222222222.11 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (965 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1265  (0.0705561); expected 358.6 (0.02)
Passed bias filter:                      730  (0.0407162); expected 358.6 (0.02)
Passed Vit filter:                        93  (0.00518713); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.89u 0.28s 00:00:01.17 Elapsed: 00:00:00.47
# Mc/sec: 6218.80
//
Query:       EPX72342.1  [L=460]
Description: DNA primase large subunit Spp2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-88  297.1   0.0    1.6e-88  296.5   0.0    1.3  1  DNA_primase_lrg  Eukaryotic and archaeal DNA primase, large s
  ------ inclusion threshold ------
       0.11   12.6   0.2        1.2    9.3   0.0    2.3  2  ENT              ENT domain


Domain annotation for each model (and alignments):
>> DNA_primase_lrg  Eukaryotic and archaeal DNA primase, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  296.5   0.0   1.8e-92   1.6e-88       2     266 .]     187     453 ..     186     453 .. 0.98

  Alignments for each domain:
  == domain 1  score: 296.5 bits;  conditional E-value: 1.8e-92
                      EEEEEHHHHHHHTT-GGS-EETTEEEE-HHHHHHHHHHHHHHHHHH..........HHGGGSSS---HHHHHHHCT--...............T CS
  DNA_primase_lrg   2 fykvpfedvldlvkrrrvllkkGyaylpkeeleslllekfrkrlekalestkeslpeleeeikederekleellealsesyvaed..vqeeeds 93 
                      f+kvpf +v+dlv+rr v+++kG ay+p +e++s+++e+f+k+l+ +le+t+++lp+l    +ed+r  l ++l++ls ++v+ +  v++++ +
       EPX72342.1 187 FFKVPFMKVPDLVERRAVFVHKGLAYVPFSEQISIVIEEFEKNLKISLENTAKALPRL----DEDDR--LLPILNHLSRGFVVPEvsVSTAKPG 274
                      8*********************************************************....*****..****************999999*** PP

                      TSSTTGGSHHHHTT--HHHHCCHHHHCCCSS--CHHHHHHHHHHHHCT--CHHHHCCCHCHST...HHHHHHHTHCHCHHHCC-STT------- CS
  DNA_primase_lrg  94 kisaknidklakesfPpCmrelleglkknghlkhegrlqltlFlkdiglsldeilelwkeaftr.teekFdkeyrynirhnyGkegkrtnyspy 186
                      +++a+++d+l+  +fP+C r+l++ l+k++hl+h +rlq++lFlkdigls++e+l +wk++f+  +++kF+keyrynirh yG eg+r+ny+ y
       EPX72342.1 275 EVTADQVDSLV-PHFPLCARHLHNVLRKEKHLRHFSRLQYGLFLKDIGLSVEEALIFWKRSFSSvNDDKFNKEYRYNIRHSYGLEGNRKNYKGY 367
                      *******9999.8********************************************************************************* PP

                      -HHHHHHS....TT---S-HHHH..HHHHHHHHHHTT....HHHHHHHHHHHHTT.HHHHHHHHHHHHHS...-TTT-SSCHHHCC CS
  DNA_primase_lrg 187 sCekiltkpppgkgdahgCpfrh.dpdklktlLqeyg..lseediedilesvkegeyqvaCtkvFelthk...cerdeikhPlqYy 266
                      sC++ilt p+ g gdahgCp+r+ + d+l t+L++ g   +++ +++++++vk ++y++aCt+vFelth+   + +++i+hPlqYy
       EPX72342.1 368 SCQQILTGPQLGPGDAHGCPYRTySLDNLVTALSTLGitPDSSGCREVVDAVKGRHYHIACTRVFELTHPqkgSLEESIHHPLQYY 453
                      **********************************9998899*******************************999999*******9 PP

>> ENT  ENT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.1     0.067     6e+02      20      55 ..     130     175 ..     127     177 .. 0.76
   2 ?    9.3   0.0   0.00013       1.2      31      65 ..     221     255 ..     211     260 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.067
         ENT  20 raqgdLs.........eekkkllteLrkeLs.IsterHraelrrvk 55 
                 ra++ L          +e+++++ +L   ++ +s+e+  ++l++++
  EPX72342.1 130 RAESALFkyrfineeaRERQQFVDSLNFQWNaVSKEEKSQYLSKIQ 175
                 6666644466666666999*******99997699999999998875 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00013
         ENT  31 kllteLrkeLsIsterHraelrrvksDerlktire 65 
                  +++e  k L+Is e+ ++ l r ++D+rl  i +
  EPX72342.1 221 IVIEEFEKNLKISLENTAKALPRLDEDDRLLPILN 255
                 5799**************************88766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (460 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       577  (0.0321825); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 3281.61
//
Query:       EPX72343.1  [L=937]
Description: translation initiation factor eIF3a [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-06   28.5   3.3    4.5e-06   27.1   0.1    3.2  3  PCI       PCI domain


Domain annotation for each model (and alignments):
>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0     0.082   1.5e+03      35      70 ..     159     203 ..     140     214 .. 0.74
   2 !   27.1   0.1   2.5e-10   4.5e-06       2     101 ..     359     485 ..     358     489 .. 0.94
   3 ?   -2.0   0.1      0.29   5.2e+03      25      59 ..     705     749 ..     682     755 .. 0.68

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.082
                 HHHHHHHHHHHHHHHHHHHHHH.........CESEEEHHHHHHHH CS
         PCI  35 laqllesLekkvrerllrqvsk.........iyssislerlakll 70 
                  +++l+ L++++r++++ q++          ++++ ++ rl +ll
  EPX72343.1 159 YRTVLDILRNNARLEVMYQLIAnsafqfclkYQRKTEFRRLCELL 203
                 456778888888888887777666655555566666777776666 PP

  == domain 2  score: 27.1 bits;  conditional E-value: 2.5e-10
                 HHHHHHHHHHHTS.HHHHHHHHHHH....................HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCESEEEHHHHHHHHTSSH..... CS
         PCI   2 sysdllkalrsgn.lsgfseelkdl....................eeelladdglaqllesLekkvrerllrqvskiyssislerlaklldlsv..... 74 
                 ++++l+k+ +++n ls+++ + +dl                     ++l ++ ++aq++  L++++ +rl++q+s+ y  +sl+ + +l  +++     
  EPX72343.1 359 NREALVKDAVNRNvLSYCDPAIRDLyrilevdfhplsickklqpiLKKLAENTDTAQYIRPLQQVILTRLFQQLSQVYDAVSLKFVMDLATFDEpysct 457
                 78899999999999**************************999999999999*********************************************** PP

                 .HHHHHHHHHHHHTTSSSEEEETTTTEE CS
         PCI  75 .devEkilvklIrdgeirakidqesgiv 101
                   ++Ek++++  ++g ++ ++++ +  +
  EPX72343.1 458 yGQIEKFIMNGNKKGAFSIRVNHIENSI 485
                 **********999999999999977665 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 0.29
                 H..........HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCES CS
         PCI  25 l..........eeelladdglaqllesLekkvrerllrqvskiys 59 
                            +e++ ++++ +++ e L++k +   + +++++y+
  EPX72343.1 705 QveedhkafiqREKQRKEVQSQKHEEALRDKNIFSKFASYIQSYK 749
                 344444666666777777777778888888877777777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (937 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2606  (0.145351); expected 358.6 (0.02)
Passed bias filter:                      494  (0.0275531); expected 358.6 (0.02)
Passed Vit filter:                        89  (0.00496402); expected 17.9 (0.001)
Passed Fwd filter:                        20  (0.00111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.09u 0.36s 00:00:01.45 Elapsed: 00:00:00.53
# Mc/sec: 5315.65
//
Query:       EPX72344.1  [L=769]
Description: histone acetyltransferase complex subunit Nto1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.4e-25   88.0  22.4    6.7e-25   87.4  12.4    2.4  2  zf-HC5HC2H_2  PHD-zinc-finger like domain
    6.2e-20   71.3   8.2    6.2e-20   71.3   8.2    2.8  3  zf-HC5HC2H    PHD-like zinc-binding domain
    7.7e-14   51.0   2.8    7.7e-14   51.0   2.8    3.2  3  PHD_2         PHD-finger
    1.3e-09   37.7   9.3    1.3e-09   37.7   9.3    3.0  4  PHD           PHD-finger
      2e-05   25.0   2.3    2.1e-05   24.9   0.1    2.2  3  EPL1          Enhancer of polycomb-like
     0.0058   16.5   2.7     0.0058   16.5   2.7    3.3  4  C1_1          Phorbol esters/diacylglycerol binding domain (C


Domain annotation for each model (and alignments):
>> zf-HC5HC2H_2  PHD-zinc-finger like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.9   2.3    0.0048        14      52      84 ..     191     225 ..     182     228 .. 0.80
   2 !   87.4  12.4   2.2e-28   6.7e-25       2     110 .]     250     362 ..     249     362 .. 0.92

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0048
  zf-HC5HC2H_2  52 erlkekCllCkkr....kGaciqCskkeCktafHvtC 84 
                   ++l  +C++C+++    + + i C +  C+ a H +C
    EPX72344.1 191 DELDGRCVICNESdcetSNVIIFCDN--CNMAVHQNC 225
                   456789*****998866677777776..*******99 PP

  == domain 2  score: 87.4 bits;  conditional E-value: 2.2e-28
  zf-HC5HC2H_2   2 eCvlCkkkgGalkktsderwvHvlCallvpevsfsnvaerepvd.vekikkerlkekCllCkkrkGaciqCskkeCktafHvtCalaaglvmeledl 97 
                   +Cv C+ ++Ga+++t d+rw H +C ++vpe+sf+++++ + v+ + +i+k+r+k+ C++Ck r Gac+qCs+k+C+tafH+tCa++ag++ +l+  
    EPX72344.1 250 SCVCCPDRDGAFRTTIDGRWCHTICGMAVPEISFHDTSRLDLVRdFYDIPKSRWKLVCCVCKLRWGACVQCSEKSCYTAFHITCARRAGFYYKLHAP 346
                   6****************************************9999***********************************************99876 PP

  zf-HC5HC2H_2  98 ek...klkvialckkh 110
                        + +v  +c +h
    EPX72344.1 347 YGnysQAEVECFCDRH 362
                   5555566777777766 PP

>> zf-HC5HC2H  PHD-like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.0   2.7    0.0047        14      35      65 ..     193     225 ..     185     228 .. 0.80
   2 ?   -5.0   2.0         6   1.8e+04      37      48 ..     249     260 ..     238     261 .. 0.68
   3 !   71.3   8.2   2.1e-23   6.2e-20       1      90 []     271     363 ..     271     363 .. 0.94

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0047
  zf-HC5HC2H  35 kklkCylCkkk....vGaciqCskkkCkkafHvtC 65 
                  + +C++C+++      ++i C++  C+ a H  C
  EPX72344.1 193 LDGRCVICNESdcetSNVIIFCDN--CNMAVHQNC 225
                 5668*****665554789999998..********9 PP

  == domain 2  score: -5.0 bits;  conditional E-value: 6
  zf-HC5HC2H  37 lkCylCkkkvGa 48 
                  +C++C ++ Ga
  EPX72344.1 249 ISCVCCPDRDGA 260
                 467777777665 PP

  == domain 3  score: 71.3 bits;  conditional E-value: 2.1e-23
  zf-HC5HC2H   1 HvvCalwipevvfeeekeiemeeiedvekikkerkklkCylCkkkvGaciqCskkkCkkafHvtCakeagllleee.....eekeklksyCkkHs 90 
                 H +C + +pe+ f+++++     ++d+ +i+k+r+kl+C++Ck + Gac+qCs+k+C +afH+tCa++ag++++ +      ++ +++ +C++H+
  EPX72344.1 271 HTICGMAVPEISFHDTSR--LDLVRDFYDIPKSRWKLVCCVCKLRWGACVQCSEKSCYTAFHITCARRAGFYYKLHapygnYSQAEVECFCDRHT 363
                 99***********99987..7899**************************************************88777777778*********5 PP

>> PHD_2  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.0   2.8   2.6e-17   7.7e-14       2      35 ..     209     241 ..     208     242 .. 0.97
   2 ?   -6.9   3.6         6   1.8e+04       4      10 ..     248     254 ..     246     254 .. 0.70
   3 ?    3.8   1.1     0.015        44       4      19 ..     317     334 ..     314     337 .. 0.86

  Alignments for each domain:
  == domain 1  score: 51.0 bits;  conditional E-value: 2.6e-17
       PHD_2   2 npllsCdkCsvaVHasCYGvskesdgeeWlCrrC 35 
                 n++++Cd+C++aVH++CYG++  ++g +W C+rC
  EPX72344.1 209 NVIIFCDNCNMAVHQNCYGIPFVPEG-QWFCKRC 241
                 99************************.******* PP

  == domain 2  score: -6.9 bits;  conditional E-value: 6
       PHD_2   4 llsCdkC 10 
                 ++sC+ C
  EPX72344.1 248 VISCVCC 254
                 6788777 PP

  == domain 3  score: 3.8 bits;  conditional E-value: 0.015
       PHD_2   4 llsCd..kCsvaVHasCY 19 
                  ++C+  +C +a+H  C 
  EPX72344.1 317 CVQCSekSCYTAFHITCA 334
                 68999999*********6 PP

>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.7   9.3   4.5e-13   1.3e-09       1      49 [.     196     241 ..     196     244 .. 0.92
   2 ?   -5.1   0.9         6   1.8e+04      18      21 ..     251     254 ..     247     259 .. 0.55
   3 ?   -3.5   0.2       3.3   9.9e+03      23      29 ..     268     274 ..     267     278 .. 0.83
   4 ?    3.1   9.6      0.03        88       2      30 ..     307     334 ..     306     338 .. 0.85

  Alignments for each domain:
  == domain 1  score: 37.7 bits;  conditional E-value: 4.5e-13
                 SBTTTTS.TTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSSTBSSTTT CS
         PHD   1 rCavCkk.ksdeeeelvqCdgCkrwfHqkClkppleseekpegewlCekC 49 
                 rC +C++ + ++++ +++Cd+C+ ++Hq+C+++p      peg+w+C++C
  EPX72344.1 196 RCVICNEsDCETSNVIIFCDNCNMAVHQNCYGIPFV----PEGQWFCKRC 241
                 6******88888**********************66....8899****** PP

  == domain 2  score: -5.1 bits;  conditional E-value: 6
                 ETTT CS
         PHD  18 CdgC 21 
                 C  C
  EPX72344.1 251 CVCC 254
                 4444 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 3.3
                 CEEETTT CS
         PHD  23 rwfHqkC 29 
                 rw+H+ C
  EPX72344.1 268 RWCHTIC 274
                 7999999 PP

  == domain 4  score: 3.1 bits;  conditional E-value: 0.03
                 BTTTTSTTSTTSCEEEET..TTSCEEETTTS CS
         PHD   2 CavCkkksdeeeelvqCd..gCkrwfHqkCl 30 
                 C+vCk      +  vqC   +C ++fH +C 
  EPX72344.1 307 CCVCKL---RWGACVQCSekSCYTAFHITCA 334
                 99***9...579*****6336*********7 PP

>> EPL1  Enhancer of polycomb-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.1   7.2e-09   2.1e-05      92     154 ..      88     170 ..      32     172 .. 0.76
   2 ?   -2.4   0.1       1.8   5.5e+03      76     102 ..     637     692 ..     607     714 .. 0.57
   3 ?   -2.8   0.3       2.4   7.2e+03      20      20 ..     700     700 ..     658     746 .. 0.52

  Alignments for each domain:
  == domain 1  score: 24.9 bits;  conditional E-value: 7.2e-09
        EPL1  92 e.................ferppssyirfseks.eeelddeveYdMDEeDekWLeelnekrkkegv..ekisediFEivmdrl 154
                 +                 +e p++++ rf++k   ++ +  v+Yd+DE D +WL  +ne+r  ++   +++s++  Ei ++ +
  EPX72344.1  88 TeslppkikacgyntstkLELPENRFERFIAKDpHDDENFPVSYDLDELDAMWLIYYNESRACSDPtwRPLSHEFLEIALTVI 170
                 2444444444444444446667999999999998777778********************7765545699*****99999876 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.8
        EPL1  76 e....................slkkeelkLpkP...sfreferp......pssyir 102
                 +                       +e++kL +P   +f+ +e+       +++y r
  EPX72344.1 637 NlsfpslkldgleciawpdcfVDTTEQAKLETPseeTFNNLESFvmnlssEEKYGR 692
                 04455555555555555555544566777777755533332222333333555555 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 2.4
        EPL1  20 d 20 
                 +
  EPX72344.1 700 P 700
                 1 PP

>> C1_1  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   2.7   1.9e-06    0.0058      12      43 ..     195     226 ..     190     229 .. 0.92
   2 ?   -4.7   3.8         6   1.8e+04      13      34 ..     237     254 ..     233     257 .. 0.66
   3 ?   -3.3   0.1       2.9   8.7e+03      33      42 ..     269     274 ..     266     280 .. 0.57
   4 ?   -3.8   8.7       4.3   1.3e+04      14      46 ..     307     337 ..     300     343 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 1.9e-06
                 -B-TTT-SB--SSSS-EEEETTT--EE-CCCC CS
        C1_1  12 tfCkhCgeflwgkekqglkCswCkllvHkkCh 43 
                 ++C  C+e+  + + +++ C++C++ vH++C+
  EPX72344.1 195 GRCVICNESDCETSNVIIFCDNCNMAVHQNCY 226
                 78******9878*******************7 PP

  == domain 2  score: -4.7 bits;  conditional E-value: 6
                 B-TTT-SB--SSSS-EEEETTT CS
        C1_1  13 fCkhCgeflwgkekqglkCswC 34 
                 fCk C       ++  ++C +C
  EPX72344.1 237 FCKRCLLA----ASDVISCVCC 254
                 56666444....4777778777 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 2.9
                 TT--EE-CCC CS
        C1_1  33 wCkllvHkkC 42 
                 wC+      C
  EPX72344.1 269 WCH----TIC 274
                 454....444 PP

  == domain 4  score: -3.8 bits;  conditional E-value: 4.3
                 -TTT-SB--SSSS-EEEETT..T--EE-CCCCTTS CS
        C1_1  14 CkhCgeflwgkekqglkCsw..CkllvHkkChekv 46 
                 C+ C+         +++Cs+  C   +H  C++++
  EPX72344.1 307 CCVCKLRW----GACVQCSEksCYTAFHITCARRA 337
                 88888877....8899997555*********9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (769 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       877  (0.0489152); expected 358.6 (0.02)
Passed bias filter:                      497  (0.0277205); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.68u 0.28s 00:00:00.96 Elapsed: 00:00:00.45
# Mc/sec: 5101.40
//
Query:       EPX72345.1  [L=212]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.5e-06   26.6   0.0    6.9e-05   22.8   0.0    2.1  2  CMD       Carboxymuconolactone decarboxylase family


Domain annotation for each model (and alignments):
>> CMD  Carboxymuconolactone decarboxylase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.014   2.6e+02      58      82 ..      52      76 ..      10      79 .. 0.74
   2 !   22.8   0.0   3.9e-09   6.9e-05      18      66 ..     145     193 ..     128     204 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.014
                HHHHHHHHHHHHHHSHHHHHHHHHH CS
         CMD 58 eeiaevlaqaaayagwpaaraAlaa 82
                 +++e+l   a+  g+p+  + l+ 
  EPX72345.1 52 AKLREALVKSAPLVGFPRTINSLRE 76
                689999999*********9988875 PP

  == domain 2  score: 22.8 bits;  conditional E-value: 3.9e-09
                 SSTS-HHHHHHHHHHHHHHTT-HHHHHHHHHHHHHTT--HHHHHHHHHH CS
         CMD  18 eggLdpkereLialavsaangceyCvdaHtraAleaGvteeeiaevlaq 66 
                 ++ ++p e +L+++a ++ ++    ++ H+++Al+ G+t+e+++ +  +
  EPX72345.1 145 NEIITPLETSLVIIASLVPQDVNPQLRGHLKGALNHGATKEQVMGARNI 193
                 66688999****************99*****************988766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       441  (0.024597); expected 358.6 (0.02)
Passed bias filter:                      426  (0.0237604); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1483.99
//
Query:       EPX72346.1  [L=627]
Description: synviolin family ubiquitin-protein ligase Hrd1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.4e-10   40.5   4.8    5.3e-10   39.4   4.8    1.6  1  zf-rbx1        RING-H2 zinc finger domain
      2e-08   34.4  10.6      2e-07   31.2  10.6    2.4  1  zf-RING_2      Ring finger domain
    6.1e-07   29.4   2.1    2.3e-06   27.5   2.1    2.1  1  zf-RING_UBOX   RING-type zinc-finger
    5.3e-06   26.2   4.8    1.1e-05   25.2   4.8    1.6  1  zf-C3HC4       Zinc finger, C3HC4 type (RING finger)
    5.9e-06   26.0   6.5    5.3e-05   23.0   2.7    2.4  2  zf-C3HC4_3     Zinc finger, C3HC4 type (RING finger)
    2.7e-05   24.0   6.7    0.00024   21.0   7.0    2.2  2  zf-RING_5      zinc-RING finger domain
    4.7e-05   23.2   2.0    4.7e-05   23.2   2.0    2.1  2  Prok-RING_4    Prokaryotic RING finger family 4
    5.2e-05   23.2   1.4    0.00026   21.0   0.7    2.1  2  zf-ANAPC11     Anaphase-promoting complex subunit 11 RING-H2 
    0.00015   21.5   3.2    0.00015   21.5   3.2    2.3  2  zf-C3HC4_2     Zinc finger, C3HC4 type (RING finger)
     0.0024   17.4   1.0     0.0024   17.4   1.0    1.8  2  Zn_ribbon_17   Zinc-ribbon, C4HC2 type
     0.0053   16.8   0.4      0.014   15.5   0.4    1.6  1  TolA_bind_tri  TolA binding protein trimerisation
  ------ inclusion threshold ------
      0.012   15.4   0.3      0.027   14.3   0.3    1.6  1  Spc29          Spindle Pole Component 29
       0.11   12.6   0.4        1.2    9.3   0.1    2.6  2  CREPT          Cell-cycle alteration and expression-elevated 
       0.15   11.7   6.3       0.29   10.8   2.6    2.5  2  zf-P11         P-11 zinc finger
       0.18   11.6   3.1       0.25   11.2   0.5    2.4  2  zf-RING_4      RING/Ubox like zinc-binding domain
        1.6    9.0   5.4        7.3    6.9   5.4    2.2  1  FANCL_C        FANCL C-terminal domain
        3.8    7.8   8.6       0.38   11.0   1.3    2.7  2  zf-C3HC4_4     zinc finger of C3HC4-type, RING


Domain annotation for each model (and alignments):
>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.4   4.8   5.1e-13   5.3e-10       2      55 .]     290     350 ..     289     350 .. 0.81

  Alignments for each domain:
  == domain 1  score: 39.4 bits;  conditional E-value: 5.1e-13
     zf-rbx1   2 tCaiCrneleeacieckapgdee.......cpvvlGeCgHaFHlhCiskWlktrkvCPlcr 55 
                 tC iCr+e+ ++    ++ ++ e       ++++   CgH  HlhC+++Wl+++++CP+cr
  EPX72346.1 290 TCTICREEMFHPDFPPENIEEMEplprgldMTPKRLPCGHILHLHCLRNWLQRQQTCPICR 350
                 8*****999876655555555556899999555555************************8 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2  10.6   1.9e-10     2e-07       2      44 .]     290     350 ..     289     350 .. 0.78

  Alignments for each domain:
  == domain 1  score: 31.2 bits;  conditional E-value: 1.9e-10
   zf-RING_2   2 eCpICleel.ssads................vl.llpCgHvfhreClerwlrssstCPlCr 44 
                 +C+IC ee+ +++                  ++ +lpCgH+ h +Cl++wl++++tCP+Cr
  EPX72346.1 290 TCTICREEMfHPDFPpenieemeplprgldmTPkRLPCGHILHLHCLRNWLQRQQTCPICR 350
                 6888887774333336677888888777776443669***********************9 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.5   2.1   2.2e-09   2.3e-06       1      39 []     291     347 ..     291     347 .. 0.92

  Alignments for each domain:
  == domain 1  score: 27.5 bits;  conditional E-value: 2.2e-09
  zf-RING_UBOX   1 CpIClelft.....................dPlv.lpCGHtFCreClwelskslegafkCP 39 
                   C+IC+e++                      +P + lpCGH+++ +Cl   +++l+++ +CP
    EPX72346.1 291 CTICREEMFhpdfppenieemeplprgldmTP-KrLPCGHILHLHCL---RNWLQRQQTCP 347
                   *****988879999999****99999999999.648***********...9*********9 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   4.8   1.1e-08   1.1e-05       1      41 []     291     349 ..     291     349 .. 0.96

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 1.1e-08
                 -TTT-S--SS-E.....................E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepn....................elleCkHsfCskCirkilksrkkvkCPlC 41 
                 C iC ee+  p+                    + l+C+H ++ +C+r++l+  ++++CP+C
  EPX72346.1 291 CTICREEMFHPDfppenieemeplprgldmtpKRLPCGHILHLHCLRNWLQ--RQQTCPIC 349
                 99******99999****************9999******************..8899**** PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.1     0.034        35      32      46 ..     283     297 ..     280     300 .. 0.76
   2 !   23.0   2.7     5e-08   5.3e-05      18      47 ..     325     353 ..     320     355 .. 0.95

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.034
                 HHHHTT-B-TTT--B CS
  zf-C3HC4_3  32 kllkrkkkCpiCrrp 46 
                 +l +++++C iCr++
  EPX72346.1 283 QLSNSDRTCTICREE 297
                 455588999999987 PP

  == domain 2  score: 23.0 bits;  conditional E-value: 5e-08
                 TTEEEEEE-HHHHHHHHHTT-B-TTT--B- CS
  zf-C3HC4_3  18 lpCgHlvlCeeCaekllkrkkkCpiCrrpi 47 
                 lpCgH+ l  +C++++l+r+++CpiCrrp+
  EPX72346.1 325 LPCGHI-LHLHCLRNWLQRQQTCPICRRPV 353
                 7*****.*********************97 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.2      0.18   1.9e+02      34      43 ..     286     295 ..     277     296 .. 0.76
   2 !   21.0   7.0   2.3e-07   0.00024       2      44 .]     291     351 ..     290     351 .. 0.81

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.18
   zf-RING_5  34 ekeavCpiCr 43 
                 +++++C+iCr
  EPX72346.1 286 NSDRTCTICR 295
                 6789*****8 PP

  == domain 2  score: 21.0 bits;  conditional E-value: 2.3e-07
   zf-RING_5   2 CnkCfekl..........skeek...........fyltsCgHifCekClkkllekeavCpiCrk 44 
                 C +C+e++          +   +           +  ++CgHi++ +Cl++ l+++++CpiCr+
  EPX72346.1 291 CTICREEMfhpdfppeniE---EmeplprgldmtPKRLPCGHILHLHCLRNWLQRQQTCPICRR 351
                 8899999888888764431...245577777888999*************************95 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1      0.63   6.7e+02      31      40 ..     288     298 ..     281     303 .. 0.72
   2 !   23.2   2.0   4.5e-08   4.7e-05      14      40 ..     325     353 ..     318     359 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.63
  Prok-RING_4  31 s.sCPlCqrri 40 
                    +C +C++++
   EPX72346.1 288 DrTCTICREEM 298
                  26999**9885 PP

  == domain 2  score: 23.2 bits;  conditional E-value: 4.5e-08
  Prok-RING_4  14 epCgHlvCkeCfdsk..dls.sCPlCqrri 40 
                   pCgH++  +C+ ++    + +CP+C+r +
   EPX72346.1 325 LPCGHILHLHCLRNWlqR-QqTCPICRRPV 353
                  5**************844.45******976 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0         1   1.1e+03      20      29 ..     287     296 ..     274     309 .. 0.75
   2 !   21.0   0.7   2.4e-07   0.00026      52      79 ..     327     351 ..     314     355 .. 0.89

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 1
                 SSSB-TTT-S CS
  zf-ANAPC11  20 sddvcGicrv 29 
                 sd +c icr 
  EPX72346.1 287 SDRTCTICRE 296
                 4666777774 PP

  == domain 2  score: 21.0 bits;  conditional E-value: 2.4e-07
                 TS-EEEHHHHHHHHHHHSTSSB-TTTSS CS
  zf-ANAPC11  52 ckhnfhlhcilkwletetskglcpmcrq 79 
                 c h++hlhc+ +wl++   ++ cp+cr+
  EPX72346.1 327 CGHILHLHCLRNWLQR---QQTCPICRR 351
                 **************87...578****97 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1       1.4   1.5e+03       2       9 ..     291     298 ..     290     302 .. 0.76
   2 !   21.5   3.2   1.4e-07   0.00015      16      40 .]     325     349 ..     313     349 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 1.4
  zf-C3HC4_2   2 CpiCldml 9  
                 C+iC +++
  EPX72346.1 291 CTICREEM 298
                 9***8876 PP

  == domain 2  score: 21.5 bits;  conditional E-value: 1.4e-07
  zf-C3HC4_2  16 tpCgHvfCqkCilrsLeekneCPlC 40 
                  pCgH  +  C++ +L++++ CP+C
  EPX72346.1 325 LPCGHILHLHCLRNWLQRQQTCPIC 349
                 59*********************** PP

>> Zn_ribbon_17  Zinc-ribbon, C4HC2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1       3.6   3.8e+03       3      11 ..     287     295 ..     285     298 .. 0.78
   2 !   17.4   1.0   2.3e-06    0.0024      24      46 ..     327     347 ..     321     350 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 3.6
  Zn_ribbon_17   3 llksCayCe 11 
                   + ++C++C 
    EPX72346.1 287 SDRTCTICR 295
                   678999996 PP

  == domain 2  score: 17.4 bits;  conditional E-value: 2.3e-06
  Zn_ribbon_17  24 CeHvlHasCarewfenddlaeCp 46 
                   C+H+lH  C+r+w++ ++   Cp
    EPX72346.1 327 CGHILHLHCLRNWLQRQQ--TCP 347
                   ***************998..887 PP

>> TolA_bind_tri  TolA binding protein trimerisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.4   1.3e-05     0.014      25      58 ..     528     561 ..     524     567 .. 0.89

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.3e-05
  TolA_bind_tri  25 qqlealqqelreLRGqiEelqyqleqleerQrdl 58 
                    + +++l q ++e+RG +E+l y++++l+   r+l
     EPX72346.1 528 NSIQSLHQKIDEMRGMTERLHYDMQELRSSVRNL 561
                    56899*********************99877765 PP

>> Spc29  Spindle Pole Component 29
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.3   2.6e-05     0.027     118     194 ..     515     594 ..     492     626 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 2.6e-05
       Spc29 118 kivelekklddqkleIkeLkreleqqrtvnseLqekvaeleeevkrlaalehSnrk...frsyssapsnsttkefvgsly 194
                  +ve+++    +  +I++L++++++ r + + L   ++el ++v++l +l +       fr   + + ++  +  v + +
  EPX72346.1 515 APVEMQRFSSLEANSIQSLHQKIDEMRGMTERLHYDMQELRSSVRNLGVLVNESAVsegFRELDQDRRSTLSNSVVREQF 594
                 57899998888999*********************************998775333477777765444444444444434 PP

>> CREPT  Cell-cycle alteration and expression-elevated protein in tumour
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.66   6.9e+02      64     106 ..     256     298 ..     248     315 .. 0.89
   2 ?    9.3   0.1    0.0011       1.2      81     139 ..     519     577 ..     503     581 .. 0.90

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.66
       CREPT  64 nkrLeaeleeRkklakmledfleaqkellakaeekleelkekl 106
                   rL +    R+    m +++ +a  e+l++++++++ ++e +
  EPX72346.1 256 FRRLREHARYRQATRDMEAMYPSATEEQLSNSDRTCTICREEM 298
                 579999999************************9999998876 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.0011
       CREPT  81 ledfleaqkellakaeekleelkeklekvksvrkelkshiqsLPdLtelpdvtgglapL 139
                 ++ f ++  ++++  ++k++e++   e+++   +el+s +++L  L + + v++g + L
  EPX72346.1 519 MQRFSSLEANSIQSLHQKIDEMRGMTERLHYDMQELRSSVRNLGVLVNESAVSEGFREL 577
                 5778899999**********************************999888888887765 PP

>> zf-P11  P-11 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.1      0.27   2.9e+02      32      42 ..     284     295 ..     281     298 .. 0.86
   2 ?   10.8   2.6   0.00027      0.29      21      45 ..     329     353 ..     325     355 .. 0.93

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.27
                 HHHSSB.ETTTS CS
      zf-P11  32 Lsvser.CpiCk 42 
                 Ls+s+r C iC+
  EPX72346.1 284 LSNSDRtCTICR 295
                 899*988****8 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00027
                 SEEEHHHHHHHHHHSSBETTTSSB- CS
      zf-P11  21 HYLClrClqllLsvserCpiCkkPL 45 
                 H L l+Cl+  L+  + CpiC+ P+
  EPX72346.1 329 HILHLHCLRNWLQRQQTCPICRRPV 353
                 99********************995 PP

>> zf-RING_4  RING/Ubox like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1       1.2   1.3e+03      34      46 ..     285     297 ..     279     298 .. 0.71
   2 ?   11.2   0.5   0.00024      0.25      19      46 ..     326     352 ..     311     353 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 1.2
   zf-RING_4  34 eeeegrCPaCree 46 
                 ++++  C  Cree
  EPX72346.1 285 SNSDRTCTICREE 297
                 4567788888875 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00024
   zf-RING_4  19 eCgyqiClfCyhrileeeegrCPaCree 46 
                 +Cg+ + l C+++ l+  ++ CP Cr++
  EPX72346.1 326 PCGHILHLHCLRNWLQ-RQQTCPICRRP 352
                 7**************6.69*******96 PP

>> FANCL_C  FANCL C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   5.4    0.0069       7.3      26      46 ..     325     345 ..     287     358 .. 0.80

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0069
                 TT----B-SGGGHHHHHHHHS CS
     FANCL_C  26 ekCnkkfHsaCLkeWlrslke 46 
                   C+++ H +CL +Wl+ +++
  EPX72346.1 325 LPCGHILHLHCLRNWLQRQQT 345
                 56**************99876 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.1      0.73   7.7e+02       9      26 ..      37      53 ..      36      61 .. 0.86
   2 ?   11.0   1.3   0.00036      0.38      11      42 .]     322     349 ..     320     349 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.73
  zf-C3HC4_4  9 ekPvsleCGhsfClsCis 26
                + P+ +  G ++Cl Ci+
  EPX72346.1 37 QSPIHITIGLNVCL-CIF 53
                689**********8.775 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00036
  zf-C3HC4_4  11 PvsleCGhsfClsCisslqkepdgeqllCplC 42 
                 P  l+CGh+  l+C+ ++ + ++    +Cp C
  EPX72346.1 322 PKRLPCGHILHLHCLRNWLQRQQ----TCPIC 349
                 8889**************99984....59999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (627 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1055  (0.0588432); expected 358.6 (0.02)
Passed bias filter:                      674  (0.0375927); expected 358.6 (0.02)
Passed Vit filter:                        88  (0.00490825); expected 17.9 (0.001)
Passed Fwd filter:                        20  (0.00111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.65u 0.27s 00:00:00.92 Elapsed: 00:00:00.44
# Mc/sec: 4284.55
//
Query:       EPX72347.1  [L=357]
Description: NEDD8 protease Nep1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.8e-18   64.8   0.0    2.5e-17   63.5   0.0    1.6  1  Peptidase_C48  Ulp1 protease family, C-terminal catalytic dom
  ------ inclusion threshold ------
        5.1    6.4  10.8        8.2    5.8  10.8    1.3  1  SelP_N         Selenoprotein P, N terminal region


Domain annotation for each model (and alignments):
>> Peptidase_C48  Ulp1 protease family, C-terminal catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.5   0.0   2.7e-21   2.5e-17      77     204 ..      82     209 ..      69     219 .. 0.77

  Alignments for each domain:
  == domain 1  score: 63.5 bits;  conditional E-value: 2.7e-21
                    ..-GGG-SEEEEEEEC.........TTEEEEEEEETCCCEEEEE-TTS-SSH.HHHHHHHHHHHHHHHHHCCCCCSTT-.GGGEEEEEEE-----S CS
  Peptidase_C48  77 kedlfdkdiiyiPined........gkHWvlliinlpdktililDSlislhtvkkenrpinnlkpyLleealkkkqkqldltpfeierltkvpqqk 164
                    ++ l+++++i++Pin          g HW+l ++++pd +++++DS+++++t k++++++n++ +   + +              i+ + +v qq 
     EPX72347.1  82 PPNLLSCKYIFMPINDMdkyaagtgGTHWSLMAVSVPDSQCYYYDSMSNGKT-KDCCSALNRISKLFNKDF-------------TIVSV-PVQQQR 162
                    567999*********7669*********************************.*********988877764.............55555.9***** PP

                    SCCCHHHHHHHHHHHHHCTHHCHHHHH.....SS...HHHHHHHHHH CS
  Peptidase_C48 165 nsgDCGiyvlkfiellaegapqessvt.....lt..ekdvdsfrkkl 204
                    n++DCG+y   f+  l ++   + + t     l+  + d++ +rkkl
     EPX72347.1 163 NGYDCGVYGAAFTLELVRRLLKSPMPTssqwkLDkfDPDLSVVRKKL 209
                    ******98666655555555444444422227663344555555555 PP

>> SelP_N  Selenoprotein P, N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8  10.8   0.00091       8.2     177     218 ..     278     319 ..     247     333 .. 0.46

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.00091
      SelP_N 177 eaeektehehahsh.kqghkhhekhghhHkekeelsesqqeep 218
                 ++ +++ +++ + +  ++ +hh++h+h H++++++ e+ +e++
  EPX72347.1 278 DE-QTNADASLNPNlDKSPNHHHHHHHRHNHSNSQYEQYEEKK 319
                 22.2222222222222333334444444444334444333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (357 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       769  (0.0428914); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2540.04
//
Query:       EPX72348.1  [L=320]
Description: cyclin pho85 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-43  148.9   0.4    1.5e-43  148.9   0.4    2.5  2  Cyclin    Cyclin


Domain annotation for each model (and alignments):
>> Cyclin  Cyclin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.9   0.4   8.5e-48   1.5e-43       4     161 .]      55     199 ..      52     199 .. 0.95
   2 ?   -4.6   5.3         1   1.8e+04      52      52 ..     273     273 ..     227     314 .. 0.55

  Alignments for each domain:
  == domain 1  score: 148.9 bits;  conditional E-value: 8.5e-48
                 HHHHHHHHHHHHHHHH--------------T.....................T--SS--SS-HHHHHHHHHHHTT--HHHHHHHHHHHHHHHH..H-TT CS
      Cyclin   4 iqqlsllldrlvanndetatasadsksnlensqkqssshtkttfaqtpkessFatkavpaisigsylsrlqkfgesaplvllgtliYldrivkrcvsea 102
                 ++ ls++l rl++ nd+ ++ ++ ++++ +             ++++++ + F++k+ p+isi+syl r+ k+++++++v+l+++iYldr+v+  ++  
  EPX72348.1  55 LEILSTFLLRLTRLNDKRQEGKDPNEIPFSA------------TSLKNPSLVFSAKNIPSISIQSYLHRILKYCPATNDVFLSLIIYLDRVVR-NFNFS 140
                 6778889999999999999999888888888............899**********************************************9.9**** PP

                 ---STTTHHHHHHHHHHHHHHHH-SS---HHHHHHHHTS-HHHHHHHHHHHHHHTTT-- CS
      Cyclin 103 lvvtsanihRllivallvatKflvDlsysnekfakvggislkELnkLEidFlflvdFdl 161
                 + ++s+nihR+li+++++ +Kf++D++y+n +++kvggi+++ELn+LE++F++++dF+l
  EPX72348.1 141 FLINSYNIHRFLIAGFTAGSKFFSDVFYTNIRYSKVGGIPVQELNHLELSFFLFNDFNL 199
                 *********************************************************96 PP

  == domain 2  score: -4.6 bits;  conditional E-value: 1
                 . CS
      Cyclin  52 k 52 
                 k
  EPX72348.1 273 K 273
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       916  (0.0510904); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 2314.93
//
Query:       EPX72349.1  [L=80]
Description: U6 snRNP-associated protein Lsm5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-18   65.1   0.2    3.7e-18   65.0   0.2    1.0  1  LSM       LSM domain
  ------ inclusion threshold ------
      0.075   13.2   0.0      0.086   13.0   0.0    1.1  1  SM-ATX    Ataxin 2 SM domain


Domain annotation for each model (and alignments):
>> LSM  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.0   0.2   4.1e-22   3.7e-18       2      67 .]      10      75 ..       9      75 .. 0.96

  Alignments for each domain:
  == domain 1  score: 65.0 bits;  conditional E-value: 4.1e-22
                HHHHTTTSEEEEEETTSEEEEEEEEEEETTSEEEEEEEEEEETTETEEEEEEEEEEEGGGEEEEEE CS
         LSM  2 flkklinkkvtvelkngrelrGtLkgfDqfmNlvLedveetlkdkkekrklglvliRGnnivlisl 67
                +++k+++++++v++k++re++GtL+gfD+++N+vL+dv+e+++   +++k +++l++Gn ++++++
  EPX72349.1 10 LIDKCVGSNLWVIMKSEREFVGTLIGFDDYVNIVLRDVTEHDTIHGTTEKHSEMLLNGNGMCMLIP 75
                689***************************************9999****************9986 PP

>> SM-ATX  Ataxin 2 SM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   9.6e-06     0.086       7      52 ..      10      56 ..       8      76 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 9.6e-06
                HHHTTTTSEEEEEETTS-EEEEEEEEE-T..T--EEEEEEEETTS.... CS
      SM-ATX  7 lltslvGkevevtvknGevyeGifstvslekdfsvvLkmarkvkk...a 52
                l+ ++vG++  v +k+   + G + +++    +++vL+ + + ++    
  EPX72349.1 10 LIDKCVGSNLWVIMKSEREFVGTLIGFDD--YVNIVLRDVTEHDTihgT 56
                7899*************************..*********999995431 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       321  (0.017904); expected 358.6 (0.02)
Passed bias filter:                      299  (0.0166769); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.42
# Mc/sec: 572.15
//
Query:       EPX72350.1  [L=750]
Description: eukaryotic protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-25   89.5   1.0    1.6e-25   89.5   1.0    3.5  4  RTP1_C1     Required for nuclear transport of RNA pol II C-te
    1.2e-07   32.1   0.9      0.069   13.6   0.0    3.9  4  HEAT_2      HEAT repeats
    0.00042   20.3   0.3       0.19   12.1   0.0    4.6  5  HEAT        HEAT repeat
     0.0077   16.3   3.9      0.041   13.9   0.3    3.4  3  Cnd1        non-SMC mitotic condensation complex subunit 1
  ------ inclusion threshold ------
      0.014   15.4   1.5       0.25   11.3   0.0    3.3  4  Nipped-B_C  Sister chromatid cohesion C-terminus
      0.033   13.9   0.3        0.2   11.4   0.0    2.6  2  RTP1_C2     Required for nuclear transport of RNA pol II C-te
       0.18   12.1   1.6       0.59   10.5   0.3    2.6  2  CPL         CPL (NUC119) domain


Domain annotation for each model (and alignments):
>> RTP1_C1  Required for nuclear transport of RNA pol II C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       3.8   9.7e+03      35      50 ..      39      54 ..      16      74 .. 0.60
   2 ?   -0.9   0.0      0.71   1.8e+03      58     102 ..     369     413 ..     368     421 .. 0.75
   3 !   89.5   1.0   6.2e-29   1.6e-25       1     111 [.     527     633 ..     527     634 .. 0.96
   4 ?   -2.0   0.0       1.6     4e+03      40      56 ..     712     730 ..     652     745 .. 0.64

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 3.8
     RTP1_C1 35 vldiekilkllleaLk 50
                ++  + +l++ll++L 
  EPX72350.1 39 AVGNQDVLETLLNHLD 54
                4445556666666665 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.71
     RTP1_C1  58 LnaikgLvaLadvfpeevlklLleeyeeenekeslderlkvGEaL 102
                 L++i+ L++ ++  +++ l ++l +  e   ++  ++rl + E++
  EPX72350.1 369 LESIHHLSSFCHLLSKSQLAQFLPQLLELWVRQPAEHRLELLEVV 413
                 678999999999888888877777777777778888888776665 PP

  == domain 3  score: 89.5 bits;  conditional E-value: 6.2e-29
     RTP1_C1   1 lqealkdlqdpllpvrahglvlLrkliekkskeavldiekilkllleaLkdedsYvYLnaikgLvaLadvfpeevlklLleeyeeenekeslderlkvG 99 
                 +++al++++++++p+r++g+++Lrklie+k+  ++++  +il++ll  L+dedsYv+Ln+i +Lv+L+d++++ +++lLle+   + ++ s+de l +G
  EPX72350.1 527 YSSALSYIHNDQVPIRGQGIYMLRKLIEAKD--KRINPLRILHTLLGLLTDEDSYVHLNVIAALVSLCDKYEDMMIQLLLEYS--KVQRYSTDETLLIG 621
                 6789***************************..**************************************999999888766..99************ PP

     RTP1_C1 100 EaLlrvirrlge 111
                 +a+++ ++rlge
  EPX72350.1 622 QAIYQSMERLGE 633
                 ***********9 PP

  == domain 4  score: -2.0 bits;  conditional E-value: 1.6
     RTP1_C1  40 kilkllleaLk..dedsYv 56 
                 + + +lle L+  ded+++
  EPX72350.1 712 RSVITLLEYLSthDEDEFI 730
                 3333333333322444443 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       6.1   1.6e+04      58      72 ..      40      54 ..      37      63 .. 0.60
   2 ?    1.0   0.0      0.22   5.7e+02      12      77 ..     341     404 ..     332     413 .. 0.73
   3 !   13.6   0.0   2.7e-05     0.069      26      69 ..     559     605 ..     530     614 .. 0.78
   4 !   13.0   0.1   4.1e-05      0.11      19      82 ..     663     733 ..     659     738 .. 0.72

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 6.1
      HEAT_2 58 igdpealpaLkelld 72
                +g++++l+ L+  ld
  EPX72350.1 40 VGNQDVLETLLNHLD 54
                455555555554443 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.22
      HEAT_2  12 pdpevrraairaLgrignpealpaLvellededpavRraaaeaLgaigdpealpaLkelldddddd 77 
                 ++  +r++a ++L +i +++    L++ l  e+ +     ++ L++ ++ ++lp L+el+ + + +
  EPX72350.1 341 SNNTLRKQAQESLLTIVSKTGTSPLLQSL--ESIHHLSSFCHLLSKSQLAQFLPQLLELWVRQPAE 404
                 66677888888888888888888888888..46677788888889999999999999988766554 PP

  == domain 3  score: 13.6 bits;  conditional E-value: 2.7e-05
      HEAT_2  26 rignpealpaLvellededpavRraaaeaLgaigd...pealpaLke 69 
                 ri++ ++l +L+ ll+ded++v  +++ aL+ + d   +  +++L+e
  EPX72350.1 559 RINPLRILHTLLGLLTDEDSYVHLNVIAALVSLCDkyeDMMIQLLLE 605
                 7788899***********************99865342346677766 PP

  == domain 4  score: 13.0 bits;  conditional E-value: 4.1e-05
      HEAT_2  19 aairaLgrignpea....lpaLvelleded.pavRraaaeaLgaig.dpealpaLkell.ddddddvvRea 82 
                 ++++ L r+ + +a     +a+++l ++ed    Rraa + L     +p+++  L+e+l ++d+d+++Re+
  EPX72350.1 663 NIAELLCRYSSSDAfiesAAAILNLENTEDkKFLRRAALQVLNSSShLPRSVITLLEYLsTHDEDEFIREQ 733
                 67777788777744444489999999776636799999999987752588887777766367788999987 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       2.3   5.9e+03       2      24 ..      50      73 ..      49      74 .. 0.74
   2 ?    0.0   0.0      0.55   1.4e+03       2      29 ..     333     358 ..     332     360 .. 0.81
   3 !   12.1   0.0   7.4e-05      0.19       1      30 [.     565     594 ..     565     595 .. 0.93
   4 ?   -3.1   0.0       5.6   1.4e+04      16      24 ..     696     704 ..     684     705 .. 0.76
   5 ?    1.4   0.0       0.2     5e+02      10      23 ..     724     737 ..     714     740 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 2.3
                HHHHHHHH.T-SSHHHHHHHHHHH CS
        HEAT  2 lPlllkll.sDpspeVReaAakaL 24
                l++l +    Dp++ V  +++++L
  EPX72350.1 50 LNHLDQVVsYDPDMPVSITSIRCL 73
                566655544799*99999999998 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.55
                 HHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgalae 29 
                 +P ll+ l++++   R+ A ++L ++++
  EPX72350.1 333 VPSLLQ-LQSNNTL-RKQAQESLLTIVS 358
                 788888.5888888.9999999999987 PP

  == domain 3  score: 12.1 bits;  conditional E-value: 7.4e-05
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalaev 30 
                 +l +ll ll+D+++ V  +++ aL+ l+ +
  EPX72350.1 565 ILHTLLGLLTDEDSYVHLNVIAALVSLCDK 594
                 7889***********************975 PP

  == domain 4  score: -3.1 bits;  conditional E-value: 5.6
                 HHHHHHHHH CS
        HEAT  16 VReaAakaL 24 
                  R+aA++ L
  EPX72350.1 696 LRRAALQVL 704
                 599999987 PP

  == domain 5  score: 1.4 bits;  conditional E-value: 0.2
                 T-SSHHHHHHHHHH CS
        HEAT  10 sDpspeVReaAaka 23 
                 +D++ ++Re + + 
  EPX72350.1 724 HDEDEFIREQCSRL 737
                 89*******99875 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.1       0.1   2.6e+02      50     125 ..     322     396 ..     313     434 .. 0.67
   2 ?   -1.4   0.1      0.86   2.2e+03      69      85 ..     462     478 ..     412     530 .. 0.57
   3 !   13.9   0.3   1.6e-05     0.041      32     101 ..     537     607 ..     506     675 .. 0.81

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.1
        Cnd1  50 lndmvk.ekgflselaklleDenprVvanalaalteiseksenaiynllpdiisklsdalnecsewgqitilefLls 125
                 + dm+k ++gf+  l++l   +n++ ++ a+ +l  i +k+++  + +  ++i++ls+  + +s+ +  + l  Ll+
  EPX72350.1 322 NDDMIKlVEGFVPSLLQL--QSNNTLRKQAQESLLTIVSKTGTSPLLQSLESIHHLSSFCHLLSKSQLAQFLPQLLE 396
                 667877567788888776..7899999***99999999995555555557778888875566666666666666665 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.86
        Cnd1  69 DenprVvanalaaltei 85 
                 +en+++    l++l+ +
  EPX72350.1 462 EENEEILLILLHLLSSV 478
                 33333333333333333 PP

  == domain 3  score: 13.9 bits;  conditional E-value: 1.6e-05
        Cnd1  32 DedpyVRktaaivvakLilnd..mvkekgflselaklleDenprVvanalaalteiseksenaiynllpdii 101
                 D+   +R + ++++ kLi+++   +    +l++l+ ll+De++ V  n++aal  + +k e+++++ll ++ 
  EPX72350.1 537 DQ-VPIRGQGIYMLRKLIEAKdkRINPLRILHTLLGLLTDEDSYVHLNVIAALVSLCDKYEDMMIQLLLEYS 607
                 44.458999999*****766523677777******************************7788888876653 PP

>> Nipped-B_C  Sister chromatid cohesion C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       1.5   3.8e+03      53      75 ..     338     360 ..     332     387 .. 0.67
   2 ?    0.5   0.0      0.19   4.9e+02       6      35 ..     388     417 ..     383     419 .. 0.90
   3 ?   11.3   0.0   9.6e-05      0.25      40      79 ..     560     599 ..     559     647 .. 0.94
   4 ?   -1.8   0.1         1   2.6e+03      54     126 ..     672     737 ..     660     749 .. 0.53

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 1.5
                 TT-SSHHHHHHHHHHHHHHHHHS CS
  Nipped-B_C  53 etdpdesirsrAdkllqeleeky 75 
                 +  +++++r++A + l ++ +k 
  EPX72350.1 338 QLQSNNTLRKQAQESLLTIVSKT 360
                 44556777777777777777665 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.19
                 HHHHHHHHHHHTSS-HHHHHHHHHHHHHHH CS
  Nipped-B_C   6 qrYlkdilecalspdsqvrlaAlevvslil 35 
                  ++l++ le+ + + +++rl  levv+ +l
  EPX72350.1 388 AQFLPQLLELWVRQPAEHRLELLEVVQYAL 417
                 57************************9987 PP

  == domain 3  score: 11.3 bits;  conditional E-value: 9.6e-05
                 S-GGGTHHHHHHHTT-SSHHHHHHHHHHHHHHHHHSHHHH CS
  Nipped-B_C  40 vhPvqcvptLialetdpdesirsrAdkllqeleekyegfl 79 
                 ++P  ++ tL  l td+d++++   ++ l +l++kye+++
  EPX72350.1 560 INPLRILHTLLGLLTDEDSYVHLNVIAALVSLCDKYEDMM 599
                 69************************************97 PP

  == domain 4  score: -1.8 bits;  conditional E-value: 1
                 T-SSHHHHHHHHHHHHHHHHHSHHHHHHTHHHHHHHHHHHHHH...H-TTTG.......GG---HHHHHHHHH CS
  Nipped-B_C  54 tdpdesirsrAdkllqeleekyegfleskalqgirlafqlqkkiasssgaklrrsasetesptallsslysll 126
                 +++d  i s+A ++l+  +   ++fl + alq ++++ +l +++  + +  l     +t+++  +++   s l
  EPX72350.1 672 SSSDAFIESAA-AILNLENTEDKKFLRRAALQVLNSSSHLPRSVITLLE-YL-----STHDEDEFIREQCSRL 737
                 55555444444.4445555556677777777777777777776542222.22.....2344555555555544 PP

>> RTP1_C2  Required for nuclear transport of RNA pol II C-terminus 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1       1.2   3.2e+03       2      18 ..      46      62 ..      45      63 .. 0.80
   2 ?   11.4   0.0   7.6e-05       0.2       5      30 ..     714     739 ..     711     740 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 1.2
     RTP1_C2  2 ledlyrtLkyVedtDtD 18
                le l++ L  V+++D+D
  EPX72350.1 46 LETLLNHLDQVVSYDPD 62
                67788888889999999 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 7.6e-05
     RTP1_C2   5 lyrtLkyVedtDtDdlVReHArdvLE 30 
                 + ++L+y  ++D+D+  Re++  ++E
  EPX72350.1 714 VITLLEYLSTHDEDEFIREQCSRLIE 739
                 6799*****************98887 PP

>> CPL  CPL (NUC119) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       1.2   3.2e+03      53      85 ..     347     396 ..     338     427 .. 0.61
   2 ?   10.5   0.3   0.00023      0.59      23     136 ..     439     558 ..     429     562 .. 0.69

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 1.2
         CPL  53 eaispallsaia.................knaeellsdnlgsqfvaevLl 85 
                 +++ ++ll+ ++                 +++  lls++  +qf+ ++L+
  EPX72350.1 347 KQAQESLLTIVSktgtspllqslesihhlSSFCHLLSKSQLAQFLPQLLE 396
                 55555555555543333333333355555566666666666666666665 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00023
         CPL  23 peviklLkegdelakktSKKdaevRrkELleaispallsaiaknaeellsdnlgsqfvaevLlsaegdkqeaieaiaklakgdlvaee.........kd 112
                  evi+ L++++++   tSKKd    ++E+l  +  +lls++    +el ++n+   +++  L++  ++ +++i+a+a+ + + l +++         + 
  EPX72350.1 439 SEVIENLNNTESVLDITSKKDVVEENEEILLILL-HLLSSVIGRNRELGYENSVPSLLSP-LKQLANYHNQIISALANDVYKTLIKANddyssalsyIH 535
                 5899**********99*************97655.5666666688899999988887765.66777777777777776666665555544434334433 PP

         CPL 113 eelhliekpfgsrlLKaLiqgdee 136
                 ++  +i+   g  +L++Li+   +
  EPX72350.1 536 NDQVPIRG-QGIYMLRKLIEAKDK 558
                 33333333.344567777776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (750 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       740  (0.0412739); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.69u 0.29s 00:00:00.98 Elapsed: 00:00:00.49
# Mc/sec: 4599.70
//
Query:       EPX72351.1  [L=740]
Description: GRAM domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.4e-35  121.4   0.4    1.1e-34  120.1   0.4    1.7  1  VASt      VAD1 Analog of StAR-related lipid transfer domain
    8.1e-30  103.0   0.1    1.7e-29  102.0   0.1    1.6  1  GRAM      GRAM domain
  ------ inclusion threshold ------
       0.12   12.0   0.1       0.24   11.1   0.1    1.4  1  PLDc_3    PLD-like domain
          2    8.4   7.5        7.6    6.4   0.1    3.0  3  Suf       Suppressor of forked protein (Suf)


Domain annotation for each model (and alignments):
>> VASt  VAD1 Analog of StAR-related lipid transfer domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.1   0.4   2.5e-38   1.1e-34       4     154 .]     420     560 ..     417     560 .. 0.94

  Alignments for each domain:
  == domain 1  score: 120.1 bits;  conditional E-value: 2.5e-38
                 EEEESS-HHHHHHHHHSS-THHHHHHHHH.TT-BS-H.HHSE.........EEEEEEEE--SSSS-SEEEEEEEEE..EEEEETT.EEEEEEEEE-T.T CS
        VASt   4 eevlpisvkalfellfgdkseflkkfleerqkttdisvgpweeakekgkltRklsytkplkgsigpkqtkvtetqtilveeddly.yivvvtttktpld 101
                 +e++p ++ ++f ll+g+++++l++f++ + k +di++g+w++++  +k tRk++y+kp++ ++  +qt++++t++  +e+ d + yi v++ ++tp d
  EPX72351.1 420 KETIPLPLSTFFLLLWGSDTTWLTNFFKDE-KLSDIKFGKWMKQD--DKWTRKVQYIKPVAPPY--RQTTCYITDV--IEHLDINdYIHVISIASTP-D 510
                 4789*************************8.**********8666..7***************9..**********..99****99***********.* PP

                 STTTTSEEEEEEEEEEEETTTE..E.EEEEEEEEEESS--TTHHHHHHHHHHH CS
        VASt 102 vPygdsFsvetryvitwgsknskstcrltvstkvefsksswlkgiIekgalkg 154
                 +P+g+sF ++t+y+  wg++++   ++l +s+ v++sksswlkg Iekga +g
  EPX72351.1 511 IPSGSSFLTKTQYICYWGTNSK---TKLDASYSVDWSKSSWLKGPIEKGAQEG 560
                 *****************87555...5***********************9876 PP

>> GRAM  GRAM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.0   0.1   3.8e-33   1.7e-29       1     114 []     186     295 ..     186     295 .. 0.98

  Alignments for each domain:
  == domain 1  score: 102.0 bits;  conditional E-value: 3.8e-33
                 HHHHHHS----TT--EEEEEEEEEESS.SEEEEEEEEESSEEEEEE-STT---EEEEEGGGEEEEEE....-TT-TT-EEEEESS-..EEEEE--TTHH CS
        GRAM   1 elfrkkfkellpeEkllatykCyllrdggpvqGrlyltnyrlcFrskplgsskkvvlpladikriekstsaanllengiqvetsskdlelaFagfvtrd 99 
                 ++f+ +fk+l+ +++l+++y C+l+rd ++ +Grlyl+++++cF+s+++g+ +++++p+++i+++ek +s+a  ++n+iq++t +   ++ Fa+f++rd
  EPX72351.1 186 HDFHVIFKTLPSDDHLIDDYGCALQRD-IFLHGRLYLSEQHICFNSSIFGWVTSIIIPVTEIVSVEK-KSTAVVFPNAIQITTLHA--RYVFASFISRD 280
                 68999***9999***************.***************************************.******************..8********** PP

                 HHHHHHHHHHHH-XX CS
        GRAM 100 eaiefieellkkahp 114
                 +++++i + +k++hp
  EPX72351.1 281 TTFQLIITIWKNIHP 295
                 ************997 PP

>> PLDc_3  PLD-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   5.3e-05      0.24      95     148 ..     238     297 ..     228     308 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 5.3e-05
      PLDc_3  95 svdlalldylPviktatkveywPdlidkllea......lvlrsvkvrllisewkeadPls 148
                 s+ + +++++ v k++t+v +   ++   l+a       + r    +l+i+ wk+  P+ 
  EPX72351.1 238 SIIIPVTEIVSVEKKSTAVVFPNAIQITTLHAryvfasFISRDTTFQLIITIWKNIHPFL 297
                 78999**************9987776555444222222799***************9974 PP

>> Suf  Suppressor of forked protein (Suf)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   3.2       2.1   9.2e+03     213     213 ..      97      97 ..      21     171 .. 0.50
   2 ?    5.3   0.0    0.0037        16     124     219 ..     244     375 ..     238     454 .. 0.56
   3 ?    6.4   0.1    0.0017       7.6     225     272 ..     576     623 ..     531     637 .. 0.79

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 2.1
         Suf 213 d 213
                 +
  EPX72351.1  97 E 97 
                 1 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.0037
         Suf 124 ssilklekRm.eelfpedskleqfvdRYklknldp..ikkrelksetkqeeek.allqkkee.qaaslees............................ 189
                  +i+++ek+  +++fp+  ++  + +RY + ++ +  ++ + ++ + k++++  ++ ++  + +   ++++                            
  EPX72351.1 244 TEIVSVEKKStAVVFPNAIQITTLHARYVFASFISrdTTFQLIITIWKNIHPFlNMAANGYNvS-DATRKHlghgysrsdgefsnssdddddqyddsdg 341
                 68999*99962679**************999986511333444444444444403333333332.2222225666677777777777665555555444 PP

         Suf 190 ...kvpqaqeskkrklesedss.vkkPdklqmve 219
                    + + ++++   + ++++++ v++P+ ++  +
  EPX72351.1 342 iaeENEDVSDDDDINSSQSSEEvVQEPNVSKVED 375
                 4443333333334444333333444444444332 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.0017
         Suf 225 aagrrleqqrksessksaeaasksqkalqqqpaplprsivallsvLPs 272
                  + ++ + +rk +++k++ ++s + +  + ++   +++iv+lls++P+
  EPX72351.1 576 KSPEKGKRKRKTPTKKKKGPISSNSDSKEAESSNNQSFIVNLLSNIPR 623
                 334445567888889999999988888888888899***********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (740 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1123  (0.062636); expected 358.6 (0.02)
Passed bias filter:                      532  (0.0296726); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.75u 0.28s 00:00:01.03 Elapsed: 00:00:00.45
# Mc/sec: 4945.49
//
Query:       EPX72352.1  [L=203]
Description: spindle checkpoint protein Mad2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.4e-23   82.3   0.1    5.8e-23   81.6   0.1    1.3  1  HORMA     HORMA domain
     0.0017   18.4   0.5      0.017   15.1   0.5    2.0  1  ATG101    Autophagy-related protein 101
  ------ inclusion threshold ------
      0.054   13.2   0.0       0.15   11.8   0.0    1.6  2  ATG13     Autophagy-related protein 13


Domain annotation for each model (and alignments):
>> HORMA  HORMA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.6   0.1   9.8e-27   5.8e-23       1     212 []      15     191 ..      15     191 .. 0.85

  Alignments for each domain:
  == domain 1  score: 81.6 bits;  conditional E-value: 9.8e-27
       HORMA   1 SlelvkellaasissilylRglfpedaFedrklsglklkiLlrgsseeadrlldwLekGvfdaLe....kkyLealiltIy.kdkdepenvlEsYtFsf 94 
                 S  l+ e+++++++sil++Rg++p ++F+ +++  + + +L+  +    ++++ +++k + ++L+     ++++++ l+I+ kd  e    lE+++F++
  EPX72352.1  15 SSRLISEFFEYAVNSILFQRGIYPPEDFKVVRK--YGISMLVTVD----EEVKTYIRK-IISQLHrwtcGGKIQKVALVITnKDSGE---DLERWQFNV 103
                 7899****************************8..99****6555....359999999.99999988899***********555555...4******** PP

       HORMA  95 kytksggkedvssskletkkknleslsldekeeekkktekevkkelealirrlitltqsLpplpekryltmkLlytdd....tPedyePpgFkaaaeee 189
                 ++ ++++    +s                   e+ ++    ++ke++alir++++ +++Lp+l+    +t+++l+++d    +P d+         +++
  EPX72352.1 104 EILQKDTP---IS------------------PENTAQDDTRIQKEVQALIRQITATVTFLPQLE--GRCTFNVLVYADrdseVPTDW---------VDS 170
                 **774443...22..................3334445679**********************9..99********99899999999.........333 PP

       HORMA 190 dstrkeneepekvsvGkvdtghh 212
                   + +  ++ e+v++++++t++h
  EPX72352.1 171 --DPRLIKNAEQVQLRSFSTNMH 191
                 ..5789999999********998 PP

>> ATG101  Autophagy-related protein 101
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.5   2.8e-06     0.017       9     141 ..      19     139 ..      12     145 .. 0.72

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 2.8e-06
      ATG101   9 vrevvkailhtIlFhRllgkvkpkdvev.esldltyvavsdeelerlvdekvealvralekasssksgqivvqFfekkrkkawfgkkeeevvWEqWivk 106
                 + e  +  + +IlF+R + +  p+d +v +++++ +    dee+++ +++ +++l r++   +     ++++   +k +         e++  E+W+ +
  EPX72352.1  19 ISEFFEYAVNSILFQRGIYP--PEDFKVvRKYGISMLVTVDEEVKTYIRKIISQLHRWTCGGKI---QKVALVITNKDS--------GEDL--ERWQFN 102
                 66666667889*****6544..4444431358**************************888543...467777767663........3444..9***** PP

      ATG101 107 vevvetp..rseserekvrealessLeeallkilelv 141
                 ve++++    s +++++  +++++++++ + +i + v
  EPX72352.1 103 VEILQKDtpISPENTAQDDTRIQKEVQALIRQITATV 139
                 ***9966664446666677777777777777776665 PP

>> ATG13  Autophagy-related protein 13
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.5e-05      0.15     103     157 ..      89     144 ..      51     149 .. 0.81
   2 ?   -1.8   0.0      0.33     2e+03     212     235 ..     177     200 ..     166     202 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.5e-05
                 CC-SEEEEEEEEEEEE-S-------.------HHHHHHHHHHHHHHHHHHHCCSHH CS
       ATG13 103 skkteivLErWlleldstsssetsd.easelelptvyKksivlfRsLytllrlLPa 157
                 +k +   LErW+ +++  +++++ + e++ ++   ++K +  l+R + +++ +LP 
  EPX72352.1  89 NKDSGEDLERWQFNVEILQKDTPISpENTAQDDTRIQKEVQALIRQITATVTFLPQ 144
                 55555569******9999997777789999999**********************5 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.33
                 TEEEEE---EEETTEEEEEEEEEE CS
       ATG13 212 hleqykftpietplGrlslsvtYR 235
                 + eq ++ + +t++ ++  +v+YR
  EPX72352.1 177 NAEQVQLRSFSTNMHKIDCQVAYR 200
                 568888999999999999999999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       748  (0.0417201); expected 358.6 (0.02)
Passed bias filter:                      608  (0.0339115); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 1486.30
//
Query:       EPX72353.1  [L=986]
Description: DuF1740 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.3e-72  242.6   7.2    5.3e-72  242.6   7.2    2.7  3  NRDE-2    NRDE-2, necessary for RNA interference
  ------ inclusion threshold ------
      0.042   13.6   0.0       0.17   11.7   0.0    2.0  1  DUF3368   Domain of unknown function (DUF3368)
       0.13   12.3   0.0       0.33   11.0   0.0    1.7  1  DUF2594   Protein of unknown function (DUF2594)


Domain annotation for each model (and alignments):
>> NRDE-2  NRDE-2, necessary for RNA interference
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  242.6   7.2   8.9e-76   5.3e-72       2     321 ..     170     499 ..     169     500 .. 0.87
   2 ?    1.0   0.8      0.03   1.8e+02      91     141 ..     620     667 ..     598     687 .. 0.84
   3 ?   -1.6   0.1       0.2   1.2e+03       7     121 ..     802     831 ..     787     906 .. 0.58

  Alignments for each domain:
  == domain 1  score: 242.6 bits;  conditional E-value: 8.9e-76
      NRDE-2   2 knaelnraveenPedidaWlelvefQdellsaeee......slskserkalaeiklsilekAle.knksnpdserLllelLklgseiwdseklakeWee 93 
                 ++a+l++++e+n  + ++Wl+l+++Q++ll +e        + ++s r+++ ei++s+lekA+  +n s+ d e+L  e+ klg ++wds++++++We+
  EPX72353.1 170 EIAQLQKELEKNSLNPSLWLRLCSLQKDLLLQEYArpnmsvREERSLRRSIHEIQISVLEKAIFfHNLSSTDIEQLATEYFKLGFSEWDSKTTQDRWED 268
                 6799***********************77754444688888778888999************862666779**************************** PP

      NRDE-2  94 llkenpnsvkLWreyldfrqsnfasfsvekvkelyekclrtlsaklegrkvshkaeeet....eeellyvllrlcrflrqaGysErAvalwQAliElnl 188
                 ll+ ++ s+kLW+ y++f +sn++sfsve++++++++cl  +++k+++  +++k  +e+    e+++lyvllr+c f +++G+ E+A+a+ Q  +E+n+
  EPX72353.1 269 LLSRYNISEKLWILYINFLISNVHSFSVESCLQTFSHCLGMINEKVSQIYEENKVLNEDvqklEKTALYVLLRICYFAKDSGFFELAYAITQVNMEVNY 367
                 ****************************************99999998888777776668899************************************ PP

      NRDE-2 189 frPsslsnqeelt..lkeFeeFWesevpriGeegakGWakwvekeeeeedkpeskkepsekeesaedlfeaWleaErereskawlPar....tmdeeee 281
                 f P++++  eel+    e+++FW+s+ p++Ge++a GW++++++ +      ++k ++s+++ s  d+f++W+e+E++   +++ P+r    + + ++ 
  EPX72353.1 368 FLPETMKL-EELSyiKCELSKFWDSDKPKFGEPNALGWKNSSNAPSFS----KEKFDDSQSSISTYDSFSQWTENEKR--FQEQKPWRepklARKLNST 459
                 ******44.333366569********************9999554332....333444444455568*********97..6677899977644444444 PP

      NRDE-2 282 eDpervvlfsDieplLfklpskelkeqLidafLeflglpp 321
                 +Dp+r v+f+D++ + f++ s+++   L + +L+f+glp+
  EPX72353.1 460 DDPFRHVIFEDLKGFVFRFLSPKALLDLKYCVLNFYGLPV 499
                 **************************************97 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.03
      NRDE-2  91 WeellkenpnsvkLWreyldfrqsnfasfsvekvkelyekclrtlsakleg 141
                  +e+lk++++sv +W   + f  ++f + +v+ + ++y+++    s+k ++
  EPX72353.1 620 IKEILKKYESSVFVW---ICFAETEFMNGKVSLCEKIYATAYTMHSSKFSD 667
                 578888999999998...6899999**************999988887665 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 0.2
      NRDE-2   7 nraveenPedidaWlelvefQdellsaeeeslskserkalaeiklsilekAleknksnpdserLllelLklgseiwdseklakeWeellkenpnsvkLW 105
                 ++av+  P+++ +W  +  f                                                                               
  EPX72353.1 802 EKAVQLFPNNVILWYVFSWFES----------------------------------------------------------------------------- 823
                 5555555666666655555544............................................................................. PP

      NRDE-2 106 reyldfrqsnfasfsv 121
                         ++  +f+v
  EPX72353.1 824 --------KQQLQFRV 831
                 ........22222222 PP

>> DUF3368  Domain of unknown function (DUF3368)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   2.9e-05      0.17      17      44 ..     934     961 ..     924     962 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 2.9e-05
     DUF3368  17 IpsvkplldaLiqaGfrispklyaevLr 44 
                  +++k ++  +i++Gfr++ ++ +++L+
  EPX72353.1 934 TDEAKSFYLLMIEKGFRLHNEVASTILE 961
                 567999********************96 PP

>> DUF2594  Protein of unknown function (DUF2594)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   5.6e-05      0.33      17      72 ..     571     627 ..     558     629 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 5.6e-05
     DUF2594  17 eEvaClKalltllLkalGqA.dAGkviinmEkyiaeledeeqaevFkntikqiktaY 72 
                 eE+  l  +l llL+++     AG  ii +Ek  +   +++q + F++tik i ++Y
  EPX72353.1 571 EEIDRLNGILYLLLQTVDDEyFAGLYIIFLEKLCQLEFNDQQYNLFSSTIKEILKKY 627
                 57777888888999999764269*********98766688999**********9999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (986 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1039  (0.0579508); expected 358.6 (0.02)
Passed bias filter:                      531  (0.0296168); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.75u 0.28s 00:00:01.03 Elapsed: 00:00:00.45
# Mc/sec: 6535.19
//
Query:       EPX72354.1  [L=299]
Description: Smc5-6 complex non-SMC subunit Nse4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-25   89.7   0.2    3.2e-25   88.2   0.0    1.9  2  Nse4_C         Nse4 C-terminal
    9.2e-05   22.5   0.0    0.00016   21.7   0.0    1.4  1  Nse4-Nse3_bdg  Binding domain of Nse4/EID3 to Nse3-MAGE


Domain annotation for each model (and alignments):
>> Nse4_C  Nse4 C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1      0.66   5.9e+03      43      45 ..     163     165 ..     137     186 .. 0.40
   2 !   88.2   0.0   3.6e-29   3.2e-25       1      90 [.     194     283 ..     194     284 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.66
      Nse4_C  43 pvl 45 
                 p+l
  EPX72354.1 163 PIL 165
                 222 PP

  == domain 2  score: 88.2 bits;  conditional E-value: 3.6e-29
      Nse4_C   1 pislfkfvinpksFaqtVeNlFylSfLvkdgkvkieldedglpvleeteeeeeekakeeeakkkqavlsldmetWkelieafdikeplip 90 
                 pi+l+kf++np+s++qtVeNlFy+SfL k+gk+++++d++g+  le ++++ +e+ +++e+k+ q+++ ++ + ++++i++f++k+++ip
  EPX72354.1 194 PIDLLKFITNPESYSQTVENLFYVSFLFKEGKAGLTEDSQGALLLECKTPPLDEQVDSGEVKNVQLIMDMTLDLYEDIIQTFKLKDSIIP 283
                 699***************************************9999777777777788*******************************9 PP

>> Nse4-Nse3_bdg  Binding domain of Nse4/EID3 to Nse3-MAGE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   1.8e-08   0.00016       1      45 [.      58     102 ..      58     111 .. 0.87

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 1.8e-08
  Nse4-Nse3_bdg   1 DSrlLvsaSelaaekarnlklggggfDvdeFvsklktfMggdrfe 45 
                    D+ lL  + +la++++++l++g+  f+ + ++  +k+f+ ++  +
     EPX72354.1  58 DALLLTKTVDLASLRTKQLHIGMPKFNIQLYIRQIKQFLNQNSSN 102
                    8999***********************************998777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (299 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       847  (0.0472419); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 2014.41
//
Query:       EPX72355.1  [L=435]
Description: eukaryotic protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.6e-55  186.9   3.9    7.5e-55  186.2   3.9    1.3  1  IFRD      Interferon-related developmental regulator (IFRD)


Domain annotation for each model (and alignments):
>> IFRD  Interferon-related developmental regulator (IFRD)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  186.2   3.9   4.2e-59   7.5e-55       2     306 .]      12     314 ..      11     314 .. 0.92

  Alignments for each domain:
  == domain 1  score: 186.2 bits;  conditional E-value: 4.2e-59
        IFRD   2 DdesssdtlSvlsssSetasv.eegeed.eeeaqedweekLkqaidelt...eksaktReaaLesllellsshyleefveerlatlldalekslkkgks 95 
                 Dde+ +dt+S+lsss ++ sv +  e+  + e+ ++w+++++ ++d+l    +  +k+Re +L +l++l+++hy+++ v+e+++ l ++l+k ++++ s
  EPX72355.1  12 DDEA-MDTISILSSSIDQLSVgS-SEDAnTLENPKTWNQQFESIVDDLLevkKYGSKEREGHLRKLYNLCTRHYVKR-VAEKVEPLEEILLKLFHSSPS 107
                 5555.89***9988889999962.433449999****************9988899********************9.8999***************** PP

        IFRD  96 e.EqalAlkalallcitlgagdeseeileelkpvLkriikdssvslsakaaaieaLglltfvggadeeeieelmeflleifssdgqsieaadsaskalv 193
                 + E +l +++l++lc+   ++ + e ++ +++  ++++++d    +++k++a+ +++llt++ +++  +i+++   l +i++sdg+ ++a+d+++  +v
  EPX72355.1 108 DtEVILSMRLLCALCLA--SVFSVEGLWIATEGRFNALVNDPH-PTAVKCEAMLSFSLLTVLLDSE-PDIMDFGYQLVSIIESDGAIVDAEDNEE--VV 200
                 *****************..99**********************.*******************988.9***************************..** PP

        IFRD 194 taalsawglLltllpssklnkkleedleealealvelLdssdvevriAAGeaiALlfElsreedeefeeeeee.......dteelleqlreLatdssKk 285
                   a++++glL+t +  ++ ++++     +a ea  e+L+  +++v++ AG+a+A l+E   +  ++++  +++       d+ +l++ lr+L+t+ssK+
  EPX72355.1 201 GIACQSLGLLVTGI--TSYSEFA----TSATEAIAEQLEAASIDVQMGAGQALAALYERIADAYSDEDTLKNSidndilpDRVHLISILRDLSTESSKS 293
                 **************..3333333....5689***************************887766666655555999*********************** PP

        IFRD 286 raKkDrkkqRsvFrdvlttiE 306
                 +aKk rk ++++Fr+vl+tiE
  EPX72355.1 294 IAKKHRKVLHQTFRSVLQTIE 314
                 ********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (435 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       724  (0.0403815); expected 358.6 (0.02)
Passed bias filter:                      502  (0.0279993); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.31s 00:00:00.87 Elapsed: 00:00:00.47
# Mc/sec: 2780.93
//
Query:       EPX72356.1  [L=596]
Description: DUF1741 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.8e-24   85.0   2.0      3e-23   82.7   2.0    2.3  1  DUF1741   Domain of unknown function (DUF1741)


Domain annotation for each model (and alignments):
>> DUF1741  Domain of unknown function (DUF1741)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.7   2.0   1.6e-27     3e-23       4     161 ..     391     559 ..     388     595 .. 0.86

  Alignments for each domain:
  == domain 1  score: 82.7 bits;  conditional E-value: 1.6e-27
     DUF1741   4 aavilDllvdfinhnLrkrldvelytlalgillrllsylkrskvRLayhWselwraLlslvrflttyasdlkskpqidtlldslvnllalfisaGdtfL 102
                 + +ilD+++ +i+hn + ++++ +y l l+ l++ ++ l ++++RL+yhW+elwr L+s++ f  t  ++  s ++   +++ l++lla+++   d+f 
  EPX72356.1 391 IGYILDICCLGIQHNAKLKINTPIYVLYLRFLHKSFALLVQNHIRLEYHWKELWRFLFSFLGFCNTLINSEFS-NNAPPIVEALMDLLAYTVANADAFV 488
                 5689************************************************************996554444.4999********************* PP

     DUF1741 103 pdpasYddLfYklvetgevltkfrdlyklalras............vtteseakesakkatnsidnlisvs 161
                  ++++  dL Ykl++  ++++ ++   kl++++s            ++++++  +sa+++ + i+ +i+ +
  EPX72356.1 489 ENTEEMVDLLYKLIRNAQIFQSVSSKVKLKNQRSahylfevisylsTKASESPDSSAEELMAIIKEVIETI 559
                 *****************************998889999998887754555555566666666666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (596 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       661  (0.0368676); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 4176.90
//
Query:       EPX72357.1  [L=181]
Description: snoRNP pseudouridylase complex protein Gar1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-39  135.3   0.0    1.8e-39  135.0   0.0    1.0  1  Gar1      Gar1/Naf1 RNA binding region


Domain annotation for each model (and alignments):
>> Gar1  Gar1/Naf1 RNA binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.0   0.0   9.9e-44   1.8e-39       9     123 ..      19     120 ..      12     133 .. 0.88

  Alignments for each domain:
  == domain 1  score: 135.0 bits;  conditional E-value: 9.9e-44
                 -TT----TTS-EEEEEEEEEEETTEEEEEE---S--B--BTT-EEEETT--EEEE--EEES-SSS-EEEEE--GGHHHHHHHTTTTSEEEEE-X....X CS
        Gar1   9 kedieigppeevleiGtvssivenevviksttsgekkvldfnsilflenktqiGkVdEifGpvnepyysVklnsseeikaksfkvgdkvyiapd..lpl 105
                 ++    gpp++vleiGt+++ +e+++v++st  ++ k+++fn++++lenk+qiGk+dEi+Gp+n++y++Vk++  e+i ++sfkvgdkvyi  d  lpl
  EPX72357.1  19 RPFTPAGPPDQVLEIGTFMHDCEGDMVCQST--NP-KIPYFNAPIYLENKSQIGKIDEILGPMNQVYFTVKPS--EGIVSSSFKVGDKVYIGGDklLPL 112
                 4667889************************..55.*************************************..************************ PP

                 XXXXXXXXXXXXXXXXXX CS
        Gar1 106 erfllteelkkkkgpdas 123
                 erfl          p+++
  EPX72357.1 113 ERFL----------PKPK 120
                 ***9..........3333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       296  (0.0165096); expected 358.6 (0.02)
Passed bias filter:                      221  (0.0123264); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 1270.38
//
Query:       EPX72358.1  [L=702]
Description: cytoplasmic threonine-tRNA ligase Trs1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.4e-36  124.5   0.0    9.6e-36  123.4   0.0    1.5  1  tRNA-synt_2b    tRNA synthetase class II core domain (G, H, P
    3.6e-18   65.5   0.1    7.6e-18   64.5   0.1    1.6  1  HGTP_anticodon  Anticodon binding domain
    4.2e-12   45.9   0.0    8.3e-12   45.0   0.0    1.5  1  TGS             TGS domain
      4e-11   42.8   0.0    8.7e-11   41.8   0.0    1.6  1  tRNA_SAD        Threonyl and Alanyl tRNA synthetase second ad


Domain annotation for each model (and alignments):
>> tRNA-synt_2b  tRNA synthetase class II core domain (G, H, P, S and T)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.4   0.0   2.1e-39   9.6e-36       6     178 ..     368     585 ..     363     586 .. 0.90

  Alignments for each domain:
  == domain 1  score: 123.4 bits;  conditional E-value: 2.1e-39
                   TTSEEEEE-SSSHHHHHHHHHHHEEEBGG.SSEEEEEEEEEEBTTTS.TBCTTTB-SEEEEEEEEEEESGGGHHHHHHHHHHHHHHHHHHTT.SCEE CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2b   6 rndreyiLkPtneetfvelirdevlrskr.LPlklyqiqtkyRdEks.dsrGLlRvreFhqkdgyvfhaeaslddslrdlikaisriferlglefra 100
                    ++++++LkP+n+++++ +++++  rs+r LP ++++++ ++R+E s +++GL+Rvr F+q+d+++f+ +++++++++ ++   ++++ ++g+ f+ 
    EPX72358.1 368 VEKEKFALKPMNCPGHCVIYKNR-DRSYRdLPWRVADFGVLHRNEFSgALSGLTRVRRFQQDDAHIFCRPDQVKSEIEGCFDFLQHVYGTFGFTFH- 462
                   45799******************.***777****************999*******************************************9976. PP

                   EEEEGTTSC..................................BTTSEEEEEEEEETTTSEEEEEEEEEEEETHHHHHTTE...........EEECT CS
                   xxxxxxxxx..................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...........xxxxx RF
  tRNA-synt_2b 101 iielmsaks..................................adykdkkefeavsesltkgieigtiqklgtrlserlga...........tvlde 152
                   ++++++ ++                                  a+y++k ++++ +  l+++++++tiq + ++l+e++++           +   +
    EPX72358.1 463 LELSTRPEEkflgdvatwdraeaqlkaaldssgyhwelnagdgAFYGPKIDITVFDA-LKRQHQCATIQLD-FQLPEQFKLefhapvnaeeaKESGN 557
                   7777776667899999***************************************99.*************.*******997766665553222345 PP

                   TSSEEEEEEEEEE.EE.HHHHHHHHHHH CS
                   xxxxxxxxxxxxx.xx.xxxxxxxxxxx RF
  tRNA-synt_2b 153 nnreksvimicaa.ig.veRllsaileq 178
                   nn++ +++mi++a +g veR++++++e+
    EPX72358.1 558 NNSYVRPVMIHRAiLGsVERMMAILTEH 585
                   778999********9**********997 PP

>> HGTP_anticodon  Anticodon binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.5   0.1   1.7e-21   7.6e-18       1      93 [.     598     691 ..     598     692 .. 0.93

  Alignments for each domain:
  == domain 1  score: 64.5 bits;  conditional E-value: 1.7e-21
                     SEEEEESSSSHHHHHHHHHHHHHHHHTTTSEEEEESSSSTHHHHHHHHHHTT-SEEEEE-HHHHHHTEEEEEETTTCEE....EEEETTHHHHHH CS
  HGTP_anticodon   1 qvvviplnekaeeleeyakklaeeLraagirvelddsnesigkkireadllgipfavvvGekelekgtvtvrdrdtreq....ervsldelvekl 91 
                     qv+++p++     +  ya+k+ ++L  ag++ ++d s++++ kk+r a+l +++f++vvG++e ++++v+vr+rd+ ++    e ++++e++ekl
      EPX72358.1 598 QVCIVPVSA---SAYAYADKVNRALVGAGLYSDVDLSDNTLPKKVRTAQLSQYNFIFVVGAEEEKSESVNVRNRDDPKKqskgEVIPVKEILEKL 689
                     8********...99**************************************************99********888664666799999999988 PP

                     HH CS
  HGTP_anticodon  92 ke 93 
                      +
      EPX72358.1 690 LK 691
                     76 PP

>> TGS  TGS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.0   0.0   1.9e-15   8.3e-12       1      58 [.      48     106 ..      48     108 .. 0.94

  Alignments for each domain:
  == domain 1  score: 45.0 bits;  conditional E-value: 1.9e-15
                 EEEEETTSSEEEEETTB-.HHHHHHHHSTTHHHHEEEEEECSEEEETTSBB-SSEEEEE CS
         TGS   1 irvytPdGkvpdlprgat.veDfAykIhrslakkfiyAlVnGqrvgldhvLedgdvveI 58 
                 i v++PdGkv++ ++++t + ++A +I+++la+++++A+V+++++++++++e  + +++
  EPX72358.1  48 IDVTLPDGKVIKATSWETtPLEVATSISKGLAERTVIAKVDDKLWDMTRPFEFSCSLKL 106
                 67999**********************************************98888876 PP

>> tRNA_SAD  Threonyl and Alanyl tRNA synthetase second additional domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.8   0.0   1.9e-14   8.7e-11       2      44 .]     217     265 ..     216     265 .. 0.98

  Alignments for each domain:
  == domain 1  score: 41.8 bits;  conditional E-value: 1.9e-14
                 EEEEETT.EEEEESS---SBGGGC-SEEEE.......CCECCCTCEEEEE CS
    tRNA_SAD   2 rvvsiGdisvelCgGtHvpnTgeIgafkil.......seesiakglrRIy 44 
                 +v+++G   ++lC G+Hvp+Tg ++ f ++        ++++++ l+R+y
  EPX72358.1 217 TVYRCGP-LIDLCTGPHVPHTGRVKSFSVMknsssyfLGDAKNDSLQRVY 265
                 8*****7.*****************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (702 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       611  (0.0340789); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.63u 0.23s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 4991.26
//
Query:       EPX72359.1  [L=810]
Description: vacuolar protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.8e-72  241.7   9.9    4.3e-72  241.5   8.0    2.2  2  Vac14_Fig4_bd  Vacuolar protein 14 C-terminal Fig4p binding
    9.9e-45  151.1   5.9    1.6e-38  131.2   0.1    5.4  5  Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
    4.6e-11   42.0   0.3       0.31   11.4   0.0    6.4  6  HEAT           HEAT repeat
     0.0014   18.8   0.4       0.18   11.9   0.1    2.9  2  ParcG          Parkin co-regulated protein


Domain annotation for each model (and alignments):
>> Vac14_Fig4_bd  Vacuolar protein 14 C-terminal Fig4p binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.4   6.2e+03     107     128 ..     132     154 ..     122     157 .. 0.73
   2 !  241.5   8.0   9.7e-76   4.3e-72       2     178 ..     529     704 ..     528     705 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.4
  Vac14_Fig4_bd 107 lvkslaelevtvellvq.ldkLv 128
                    l+k +a++e+tv+   + ld+Lv
     EPX72359.1 132 LCKLFADTEITVKNGAElLDRLV 154
                    67888899999988777347777 PP

  == domain 2  score: 241.5 bits;  conditional E-value: 9.7e-76
  Vac14_Fig4_bd   2 kllekrgsliirkLcvllnaekvykelaeiLekeedlefasamvqtLnliLltsselaelRkkLkslkeeeaaelFatLfkswchnpvatlslcLl 97 
                    k++++rg+liir+Lc++++ e+vy+++a+iLe ee+le as+mv++L+++L t++el +lRkkLk+++  + +++F+tL+++wchn+va+++lcLl
     EPX72359.1 529 KFMNSRGNLIIRQLCNHIEGERVYTAFASILEVEENLELASTMVEVLSNNLFTAPELFDLRKKLKQSS-LKLQNIFTTLYRAWCHNSVAVFALCLL 623
                    7899*************************************************************885.5899*********************** PP

  Vac14_Fig4_bd  98 aqaYelayelvkslaelevtvellvqldkLvqLlEspvfaklRLqLlepekhpallkslygllmlLPqskafktLkkRLks 178
                    +q+Ye+a++l++++ae+e++v++l+qldkLvqL+Espvf+++RLqLlepek+p+l k+lyg+lmlLPqs+af+tL++RL++
     EPX72359.1 624 SQNYEHAANLLTVFAEIEFNVDMLIQLDKLVQLIESPVFTYMRLQLLEPEKYPYLHKALYGILMLLPQSSAFRTLRDRLQC 704
                    *******************************************************************************98 PP

>> Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.2   0.1   3.5e-42   1.6e-38       4      97 .]      63     156 ..      60     156 .. 0.98
   2 !    6.2   0.0    0.0035        16      23      60 ..     241     278 ..     235     324 .. 0.83
   3 !    6.1   0.0    0.0038        17      16      93 ..     328     404 ..     319     407 .. 0.88
   4 ?    4.2   0.0     0.015        65      25      81 ..     434     490 ..     421     503 .. 0.83
   5 ?    1.5   0.0       0.1   4.5e+02      48      80 ..     582     613 ..     577     619 .. 0.81

  Alignments for each domain:
  == domain 1  score: 131.2 bits;  conditional E-value: 3.5e-42
  Vac14_Fab1_bd   4 kggligLaavaialekkikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalvklvaDsdesvksgaelldrllkd 97 
                     ggligLaavaial+ ki++y+e+i+ pvl cf+D+ds++RyyacEs+yni kvakgev++++n +fd+l+kl+aD++  vk+gaelldrl+kd
     EPX72359.1  63 FGGLIGLAAVAIALGPKIDRYMESIIMPVLYCFNDSDSKIRYYACESMYNIGKVAKGEVFRFFNLMFDVLCKLFADTEITVKNGAELLDRLVKD 156
                    69*******************************************************************************************8 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.0035
  Vac14_Fab1_bd  23 eyleeivkpvlkcfsDkdsrvRyyacEslyniakvakg 60 
                    +yl  +++ +++++sD ++ +R  ++ +ly   + ++ 
     EPX72359.1 241 SYLPYLLDGLMNYLSDPNESIRIVTSNCLYDFLREIQR 278
                    578889999*********************98876654 PP

  == domain 3  score: 6.1 bits;  conditional E-value: 0.0038
  Vac14_Fab1_bd  16 alekkikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalvklvaDsdesvksgaelldr 93 
                     le++i+  +++i++++++ +      +   a   ly  + ++ ++vl l+++i++ l  l++   e++++ a+ l +
     EPX72359.1 328 ILEAHIQIDCKKILEIIVNHLGSPVPLIQEKALKWLYEFIYISPKDVLFLISKILENLLPLMSKG-ENIRQIAKELSQ 404
                    577888888999************************************************99865.788888877765 PP

  == domain 4  score: 4.2 bits;  conditional E-value: 0.015
  Vac14_Fab1_bd  25 leeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalvklvaDsd 81 
                    ++++++++ k +s +++++R  + E +  + + a g+++ +  +if+++   ++D  
     EPX72359.1 434 FHTLIEVLQKLLSNDNEETRLCSLEWVLLLQRRAGGKLICMHDTIFQTFLLQLSDPS 490
                    6788999999999999******************************98776666654 PP

  == domain 5  score: 1.5 bits;  conditional E-value: 0.1
  Vac14_Fab1_bd  48 cEslyniakvakgevlkllneifdalvklvaDs 80 
                    +  l+ + k++k++ lk l++if++l++  + +
     EPX72359.1 582 APELFDLRKKLKQSSLK-LQNIFTTLYRAWCHN 613
                    55699*********996.799999999987765 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.0     7e-05      0.31       1      30 [.      88     116 ..      88     117 .. 0.87
   2 ?   -2.8   0.0       2.6   1.2e+04       3      16 ..     130     143 ..     129     145 .. 0.83
   3 !   11.4   0.0   6.9e-05      0.31       1      28 [.     246     273 ..     246     276 .. 0.91
   4 !    5.7   0.0    0.0049        22       1      28 [.     340     367 ..     340     370 .. 0.92
   5 ?    3.0   0.1     0.035   1.6e+02       1      22 [.     437     458 ..     437     463 .. 0.86
   6 ?    1.8   0.0     0.088     4e+02       4      27 ..     481     504 ..     478     507 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 7e-05
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalaev 30 
                 ++P+l    +D+++++R+ A++++ ++ +v
  EPX72359.1  88 IMPVLYC-FNDSDSKIRYYACESMYNIGKV 116
                 6788666.7****************99886 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 2.6
                 HHHHHHHT-SSHHH CS
        HEAT   3 PlllkllsDpspeV 16 
                 ++l+kl  D++  V
  EPX72359.1 130 DVLCKLFADTEITV 143
                 5799*999999877 PP

  == domain 3  score: 11.4 bits;  conditional E-value: 6.9e-05
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgala 28 
                 ll+ l++ lsDp+ ++R  + ++L +++
  EPX72359.1 246 LLDGLMNYLSDPNESIRIVTSNCLYDFL 273
                 68889*******************9986 PP

  == domain 4  score: 5.7 bits;  conditional E-value: 0.0049
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgala 28 
                 +l ++++ l +p p + e A+k L +++
  EPX72359.1 340 ILEIIVNHLGSPVPLIQEKALKWLYEFI 367
                 7999********************9986 PP

  == domain 5  score: 3.0 bits;  conditional E-value: 0.035
                 HHHHHHHHHT-SSHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAak 22 
                 l+ +l+klls ++ e R  +++
  EPX72359.1 437 LIEVLQKLLSNDNEETRLCSLE 458
                 6899*****9999999998876 PP

  == domain 6  score: 1.8 bits;  conditional E-value: 0.088
                 HHHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAakaLgal 27 
                 ++l  lsDps  V +  ++ L+ +
  EPX72359.1 481 TFLLQLSDPSDLVVSRILELLAYI 504
                 454558*******99988888766 PP

>> ParcG  Parkin co-regulated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0     0.013        60      30      68 ..     233     275 ..     215     288 .. 0.72
   2 !   11.9   0.1   4.1e-05      0.18      34     139 ..     432     534 ..     422     552 .. 0.81

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.013
       ParcG  30 eiekLdydalLplffdGlre....tkhpyrflategikdllea 68 
                 +i  L++  +Lp ++dGl++     ++  r+++ ++++d+l++
  EPX72359.1 233 SIPDLEFISYLPYLLDGLMNylsdPNESIRIVTSNCLYDFLRE 275
                 56789999*********87521115677899999999999988 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 4.1e-05
       ParcG  34 LdydalLplffdGlretkhpyrflategikdlleaageekilpvlpklilplkeaLntrdeeviesaLkvlqklvkaseligeaLvpyyrqlLpvlnlf 132
                 +d+++l+ ++   l+++++  r+ + e +  ll+++++ k++++   +       L+  ++ v+ + L++l  +  a ++ +e+Lvp+++ lL++++  
  EPX72359.1 432 VDFHTLIEVLQKLLSNDNEETRLCSLEWVL-LLQRRAGGKLICMHDTIFQTFLLQLSDPSDLVVSRILELLAYI--AISHKSENLVPFLKYLLQMFSED 527
                 577788888888788888888877777665.666678889999999999999999****************999..666679**************965 PP

       ParcG 133 knkrvnl 139
                 ++   ++
  EPX72359.1 528 RKFMNSR 534
                 5444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (810 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       955  (0.0532657); expected 358.6 (0.02)
Passed bias filter:                      629  (0.0350828); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.71u 0.30s 00:00:01.01 Elapsed: 00:00:00.47
# Mc/sec: 5216.31
//
Query:       EPX72360.1  [L=169]
Description: TIM22 inner membrane protein import complex subunit Tim22 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-32  112.3   5.1    1.7e-32  112.1   5.1    1.1  1  Tim17     Tim17/Tim22/Tim23/Pmp24 family
  ------ inclusion threshold ------
       0.11   12.5   1.0        3.3    7.8   0.1    2.3  2  DUF543    Domain of unknown function (DUF543)


Domain annotation for each model (and alignments):
>> Tim17  Tim17/Tim22/Tim23/Pmp24 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.1   5.1   1.9e-36   1.7e-32       1     111 []      39     157 ..      39     157 .. 0.97

  Alignments for each domain:
  == domain 1  score: 112.1 bits;  conditional E-value: 1.9e-36
       Tim17   1 cvyktglsgvlGallGavfglvkgsrradtp......apskerlreglrsvgkrgpslGknfgvvgglysgiecaleklRgkediwnsvaAGaltGall 93 
                 cv k++++g +G++lG++fgl+++s + ++       +  +e++r +lr++g+r++s++k+fgv+g++++g ec++e +R+k+di+n+ +AG++tG++l
  EPX72360.1  39 CVFKSIAAGGMGFGLGGIFGLFMSSLDMQSMdpqiyeKKFREQFRIQLREMGTRSYSSAKSFGVLGLIFAGSECCIEAFRAKTDIYNPTIAGFFTGGVL 137
                 8999*********************99998899999999***********************************************************9 PP

       Tim17  94 .r.agpqaaavgaiggaafs 111
                  r agp+a++ g++g+ afs
  EPX72360.1 138 aRkAGPKAMVLGGAGFSAFS 157
                 636****************7 PP

>> DUF543  Domain of unknown function (DUF543)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.1   0.00037       3.3      18      46 ..      33      61 ..      17      68 .. 0.80
   2 ?    3.3   0.1    0.0089        80      36      61 ..     127     154 ..     109     158 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.00037
      DUF543 18 dekwDaclsnllvkvglgllvGvvasvll 46
                +   + c+ +++   g+g++ G ++++++
  EPX72360.1 33 TFVQESCVFKSIAAGGMGFGLGGIFGLFM 61
                5556789999****************987 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.0089
      DUF543  36 llvGvvasvllfr..rRaapvalGaGvG 61 
                 +++G +++ +l+r    +a v  GaG+ 
  EPX72360.1 127 TIAGFFTGGVLARkaGPKAMVLGGAGFS 154
                 689**********887788999999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       316  (0.0176251); expected 358.6 (0.02)
Passed bias filter:                      257  (0.0143343); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.41
# Mc/sec: 1222.52
//
Query:       EPX72361.1  [L=169]
Description: nascent polypeptide-associated complex alpha subunit Egd2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.8e-14   51.4   2.0    1.2e-13   50.8   0.4    2.0  2  NAC            NAC domain
  ------ inclusion threshold ------
        9.8    6.9  20.9        2.1    9.0  16.4    2.1  2  Ribosomal_60s  60s Acidic ribosomal protein


Domain annotation for each model (and alignments):
>> NAC  NAC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.8   0.4   1.3e-17   1.2e-13       3      56 ..      26      78 ..      25      79 .. 0.95
   2 ?   -1.1   0.0      0.21   1.9e+03      29      44 ..     134     149 ..     131     157 .. 0.73

  Alignments for each domain:
  == domain 1  score: 50.8 bits;  conditional E-value: 1.3e-17
         NAC  3 KlrkalkklglkeipgieeVtirksdgkvlvfdnPkVqkspgsntyvvfGeaee 56
                K++k  +klglk ++gi++V +r++++ +l++++P V+ks + n +vv G++ +
  EPX72361.1 26 KAQKLVQKLGLKRVEGITRVAMRRPKNVLLIVNDPIVYKSSN-NAFVVLGKVTV 78
                9***************************************99.67*****9876 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.21
         NAC  29 gkvlvfdnPkVqkspg 44 
                 + +lv +++ V ++++
  EPX72361.1 134 DVELVMAQANVNRAKA 149
                 4778888888886654 PP

>> Ribosomal_60s  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0         1   9.2e+03       4      13 ..      24      33 ..       9      43 .. 0.56
   2 ?    9.0  16.4   0.00023       2.1      30      84 ..      73     129 ..      61     132 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1
                   XXXXXXXXXX CS
  Ribosomal_60s  4 aenikkvlka 13
                   ae+ +k++++
     EPX72361.1 24 AEKAQKLVQK 33
                   3333333333 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00023
                    XXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXX.XX--SS-- CS
  Ribosomal_60s  30 legkdieellangaakla...aaaaaaaaaaaaaaaaaaaeekkkeeeeeEeedddmG 84 
                    l ++++e++ a+++a+       + a+  aaa ++aa+a+ee +k ee+ Ee  dd G
     EPX72361.1  73 LGKVTVEDMAAQARAFSEaqkKNGEAGEGAAATEEAAPAKEEPAKIEEA-EEPVDDSG 129
                    6789**********99778876666677777777777777777776666.56655666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       828  (0.0461822); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.45
# Mc/sec: 1121.14
//
Query:       EPX72362.1  [L=304]
Description: COPII-coated vesicle component Hrf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-88  294.9   3.1    5.1e-88  294.6   3.1    1.0  1  YIF1      YIF1
    0.00021   21.1   3.9     0.0004   20.2   3.9    1.5  1  Yip1      Yip1 domain


Domain annotation for each model (and alignments):
>> YIF1  YIF1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  294.6   3.1   5.7e-92   5.1e-88       2     238 ..      62     303 ..      61     304 .] 0.97

  Alignments for each domain:
  == domain 1  score: 294.6 bits;  conditional E-value: 5.7e-92
        YIF1   2 dpaaqmalqlGqsalsqgqeyveknlnryvsvsalkyyFnVsnsYVlkKlllllfPflhksWsrkseqseesse...ylppredvnapDLYiPlmalvt 97 
                  ++aqm++qlG++a+++g+ey+e+n++r++s+++l++yF+V+nsYV+ Klll++fP++++sW+rk ++se + +   y++p ed+n+pD+YiPlma+vt
  EPX72362.1  62 SATAQMGFQLGRNAVNAGHEYMEQNFGRWLSTTQLHHYFSVTNSYVVAKLLLIIFPWRRRSWARKLKRSEMNGSaegYCAPGEDLNSPDMYIPLMAFVT 160
                 679*****************************************************************99988899*********************** PP

        YIF1  98 YillaglllGlqgkFspelLgikassalavvllevlilklglYllnissasslldlvaysgYkfvgvivtlllklllgeglvyylvllylvlalafFll 196
                 ++ll++ l+G+q+kF+pelLg +as+a+ vvl+e+l+++lg+Yllnis++s++ldl+a+sgYkf+g+i+t l +l +++  ++ +++ly++la+afFll
  EPX72362.1 161 HLLLICALAGMQDKFQPELLGLRASKACGVVLFEFLATRLGCYLLNISNQSQVLDLLAFSGYKFIGLILTSLSRLAGMPW-FTRFTFLYTYLATAFFLL 258
                 ************************************************99**********************99996665.****************** PP

        YIF1 197 rsLklvllpeas....etvkksqrkkrkqflflvaavlQlllmllL 238
                 rsLk+++lpe++    +t++++qr++r +flf++a + Q+l+m++L
  EPX72362.1 259 RSLKYAVLPESTmainATITSHQRSRRIYFLFFIA-ASQILFMYIL 303
                 ************999877**************999.9*******98 PP

>> Yip1  Yip1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   3.9   4.4e-08    0.0004      12     148 ..     127     257 ..     121     303 .. 0.79

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 4.4e-08
        Yip1  12 lkkepp............ilrapdlallllalltlllgllaslnlgqtlasgeevqgltlssllga.iiggylglllgllllalllhliakllggkgsf 97 
                 lk+++              l++pd++++l+a++t ll++ a   +++ ++++       l+ l ++ + g +l  +l+  l  +ll++      ++   
  EPX72362.1 127 LKRSEMngsaegycapgeDLNSPDMYIPLMAFVTHLLLICALAGMQDKFQPE-------LLGLRASkACGVVLFEFLATRLGCYLLNI-----SNQSQV 213
                 555555566666677777899*********************9999999988.......3444444588888888999**********.....99999* PP

        Yip1  98 kqtlsvvgyallPlilgaliaillllllgtllllvgllaliWslvllylgl 148
                  ++l+++gy ++ lil +l  ++ +++++          +++++ +++++l
  EPX72362.1 214 LDLLAFSGYKFIGLILTSLSRLAGMPWFTR-------FTFLYTYLATAFFL 257
                 *****************************9.......33333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       486  (0.0271069); expected 358.6 (0.02)
Passed bias filter:                      263  (0.014669); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2238.92
//
Query:       EPX72363.1  [L=137]
Description: translation initiation factor eIF1A [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-20   72.8   0.1      2e-20   72.3   0.1    1.2  1  eIF-1a    Translation initiation factor 1A / IF-1


Domain annotation for each model (and alignments):
>> eIF-1a  Translation initiation factor 1A / IF-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.3   0.1   1.1e-24     2e-20       1      63 [.      32      93 ..      32      94 .. 0.97

  Alignments for each domain:
  == domain 1  score: 72.3 bits;  conditional E-value: 1.1e-24
                EEEEEEEEEEETTTEEEEEE.SSSSBEEEEE-HHHHCT----TT-EEEEEE-TT-TTEEEEES CS
      eIF-1a  1 gevigkViealgnnlfrVelpdngkevlaeipgkfRnkiwikrGdyVlVelspydltkGrIvy 63
                g+++++V+++lgn++++  ++d g+++l++i+gk+R+k+wi++Gd++l +l++++++kG+++ 
  EPX72363.1 32 GQIYAQVTRMLGNGRIEAACFD-GVKRLGHIRGKLRKKVWINQGDIILLSLREFQDEKGDVIL 93
                699******************6.**************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       399  (0.0222544); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 984.53
//
Query:       EPX72364.1  [L=420]
Description: magnesium ion transporter Mrs2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-09   36.7   5.7    1.6e-08   34.2   5.7    1.9  1  CorA      CorA-like Mg2+ transporter protein


Domain annotation for each model (and alignments):
>> CorA  CorA-like Mg2+ transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   5.7   9.1e-13   1.6e-08     111     285 ..     190     384 ..     160     391 .. 0.79

  Alignments for each domain:
  == domain 1  score: 34.2 bits;  conditional E-value: 9.1e-13
        CorA 111 llyrlldeivdrlfellekleeeldeledeledstkkeilrelaqlrrrlvklrralapnrevlk...............rlla..kaddkllddedke 192
                  l+ +l ++v++l+ +l+ l   + +l   +e +++++ lr+l+   rrl  + +  +  r+vl+               ++l+  k++d+   de ++
  EPX72364.1 190 ALETILISVVNTLDSELQVLQNLVSDLLADFELDINQDRLRTLLIFSRRLSGFLKKTTLIRDVLDelleqdqdlagmyltERLQtgKTRDHDKHDEIEL 288
                 5677888899999999999999999999999******************9999888888999999777788888888888555579888888888999* PP

        CorA 193 ylrdlldelerllemlealrerleslqdtyssllserlNrvmk...vLTvltaif.lPlTlitGiyGmNfkglPelewsygypfvlllglmallail 285
                 +l++ + +++ +++++++l   ++s  ++++ +l+ + N +m    +L+ +t  +    ++i+GiyGmN ++  e     +y  v+l+++ma++  +
  EPX72364.1 289 LLETYYKQVDEIVQQTDNLVGNIRSTEEICNIMLDANRNSLMLlglKLSAVTLGLgFG-AIIAGIYGMNLPNGFEESPVAFYSTVGLIFSMAAVLSA 384
                 ******************************************7333588888888788.88**********85533333345556666666554443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (420 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       822  (0.0458475); expected 358.6 (0.02)
Passed bias filter:                      648  (0.0361426); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.28s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 2778.39
//
Query:       EPX72365.1  [L=161]
Description: DUF1690 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.3e-24   84.6   6.8      1e-23   84.3   6.8    1.0  1  DUF1690   Protein of Unknown function (DUF1690)
      6e-06   26.3   7.4    7.4e-06   26.0   7.4    1.1  1  CortBP2   Cortactin-binding protein-2
  ------ inclusion threshold ------
      0.012   15.7   1.7      0.021   15.0   0.1    2.0  2  PYRIN     PAAD/DAPIN/Pyrin domain
      0.063   13.4   0.6       0.18   12.0   0.1    2.0  2  CHCH      CHCH domain
      0.065   13.7   5.4       0.07   13.6   4.2    1.6  1  eIF3_N    eIF3 subunit 6 N terminal domain


Domain annotation for each model (and alignments):
>> DUF1690  Protein of Unknown function (DUF1690)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.3   6.8   2.9e-27     1e-23       4     135 ..      13     147 ..      10     150 .. 0.91

  Alignments for each domain:
  == domain 1  score: 84.3 bits;  conditional E-value: 2.9e-27
     DUF1690   4 etpiqfSqslvsqLessketdasraqalekliqerVaeeLkkLraeeeetlkkfeeklekellkdeadakdelsskalnekieeLrkkleefkkkeeek 102
                 ++p++fS+ lv +L++s+etd+sr   +e++iq+rV++eLkkL+++++++++ +e++  +++++ e++++ +l+s+ l+++ ++ r++le+ ++ +++ 
  EPX72365.1  13 HAPTEFSEGLVRHLKESPETDTSRWMDMEAYIQKRVQSELKKLQDRQKKVIDVLEDEEWRQNNQLEKQNEGSLNSNLLKNEFTAFRERLEKESAAHQSI 111
                 689******************************************************99999999999**********************966555433 PP

     DUF1690 103 l...peeveeareevveClrenkgkpLdCweeveeF 135
                 +   ++e+e++r+++ +C+ en +k+L C    e+F
  EPX72365.1 112 TnetWKEIENTRSDLFACMSENADKSLLCRPFAEKF 147
                 255699999********************9888888 PP

>> CortBP2  Cortactin-binding protein-2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   7.4   2.1e-09   7.4e-06      67     174 ..      15     125 ..       7     132 .. 0.89

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 2.1e-09
     CortBP2  67 sketsesevkklyekqlaeLekliekqreaqermleqLaaaekrhrkvleeLeeekrkheedtaqgddvt...ylLekererLkqeleqekaqkkklek 162
                  +e+se  v++l+e++ +   + ++   + q+r++++L+++++r++kv++ Le+e  +++++++++++     +lL++e +  ++ le+e a+++++++
  EPX72365.1  15 PTEFSEGLVRHLKESPETDTSRWMDMEAYIQKRVQSELKKLQDRQKKVIDVLEDEEWRQNNQLEKQNEGSlnsNLLKNEFTAFRERLEKESAAHQSITN 113
                 56778888999999999999999********************************99999998888875434599************************ PP

     CortBP2 163 elkkllekleee 174
                 e  k+ e+ +++
  EPX72365.1 114 ETWKEIENTRSD 125
                 **9999988765 PP

>> PYRIN  PAAD/DAPIN/Pyrin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.1      0.41   1.5e+03      35      35 ..      51      51 ..      22      78 .. 0.61
   2 ?   15.0   0.1   5.9e-06     0.021       8      51 ..      88     133 ..      87     138 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.41
                C CS
       PYRIN 35 e 35
                e
  EPX72365.1 51 E 51
                2 PP

  == domain 2  score: 15.0 bits;  conditional E-value: 5.9e-06
                 CC-HHHHHHHHHHHHH.--SSSHTT...HCCHCT-SHHHHHHHHHHH CS
       PYRIN   8 eLseeelkkFKslLkeeeeglksip...rgelekadrvdladlLveh 51 
                 +L ++e+  F+++L++e  +++si+   ++e+e+  r dl  ++ e+
  EPX72365.1  88 NLLKNEFTAFRERLEKESAAHQSITnetWKEIENT-RSDLFACMSEN 133
                 799***********88777788888888*****98.99999888776 PP

>> CHCH  CHCH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       1.1   4.1e+03      24      31 ..      92      99 ..      91      99 .. 0.77
   2 ?   12.0   0.1   4.9e-05      0.18       7      29 ..     125     147 ..     124     148 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 1.1
                HHHHHHHH CS
        CHCH 24 kefeafke 31
                +ef+af+e
  EPX72365.1 92 NEFTAFRE 99
                78999986 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 4.9e-05
                 HHHHHHHHCTSSTTTTHHHHHHH CS
        CHCH   7 eylkClkdnsdefskCrkefeaf 29 
                  ++ C+ +n d + +Cr + e+f
  EPX72365.1 125 DLFACMSENADKSLLCRPFAEKF 147
                 689****************9998 PP

>> eIF3_N  eIF3 subunit 6 N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   4.2     2e-05      0.07      71     117 ..      45      95 ..      16     103 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 2e-05
      eIF3_N  71 reevleeleeleeeaekvlelledeevvsn..lrs..dkkqnlefLkeehg 117
                 ++ v +el++l+++ +kv+++ledee ++n  l++  + + n+++Lk+e+ 
  EPX72365.1  45 QKRVQSELKKLQDRQKKVIDVLEDEEWRQNnqLEKqnEGSLNSNLLKNEFT 95 
                 567889********************9999553333466667778888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2220  (0.123822); expected 358.6 (0.02)
Passed bias filter:                      774  (0.0431703); expected 358.6 (0.02)
Passed Vit filter:                        71  (0.00396006); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.45u 0.30s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 1118.11
//
Query:       EPX72366.1  [L=292]
Description: tRNA acetyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.9e-21   74.5   1.7    1.1e-20   74.1   0.9    1.6  2  THUMP     THUMP domain


Domain annotation for each model (and alignments):
>> THUMP  THUMP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.12   2.1e+03      13      76 ..      22      86 ..      16     100 .. 0.56
   2 !   74.1   0.9   6.4e-25   1.1e-20       8     143 ..      92     232 ..      86     233 .. 0.94

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.12
                H-SEEEEETTEEEEECTEEEEEETHHHHHHHHHTSTTECEEEEE...EEEEESSHHHHHHHHHHHHH CS
       THUMP 13 nverveagkgrivvelkgekpeedeellkealekargiqrvipv...cevceadledileaakeivk 76
                +++ +e++  +i++ + + k+  + +++ + +++   +  + p+    e++ ++  d+++a++   +
  EPX72366.1 22 KRTGIEKNESGILITVPRGKERQASNEIINVFSQ--HVATLWPEtvgSEETDNEEGDLEDAISRELE 86
                5555666777777777766666666666333333..5555555555545555555555555555444 PP

  == domain 2  score: 74.1 bits;  conditional E-value: 6.4e-25
                 HHTT.H-SEEEEETTEEEEECTEEEEEETHHHHHHHHHTST......TECEEEEEEEEEESSHHHHHHHHHHHHHHHHHHCT-..EEEEEEEESSSTSS CS
       THUMP   8 kegkvnverveagkgrivvelkgekpeedeellkealekar......giqrvipvcevceadledileaakeivkkkfeeeke..tFaVrvkrrgkhfe 98 
                 k+ k++ +  +  + ++vv++k+++p+ + +l++ +++  r      + qr+ p++ +++a++ed++++a+e+ k++f+e++   +FaV+++ r++   
  EPX72366.1  92 KKSKKELLTPILIDIQCVVFIKTRSPVDPVKLVEHTCKEGRtkkmtrFTQRLTPIVKTTGASIEDLENLASEVLKPHFHEGQHnlKFAVQATIRNHS-V 189
                 5666777788888889*****************************************************************99**************.* PP

                 SHHHHHHHHHHHHHHCCTT-EE-SSS-SEEEEEEEETTEEEEEEE CS
       THUMP  99 ftsreinrevGkaivektglkVdlenPdivvrveiikdkayisid 143
                 + + +i r ++k +   ++  Vdl+n+d++v v+++k+ +++s++
  EPX72366.1 190 IKKDDIYRSIAKCVGHDHK--VDLKNYDLLVVVQVFKNIIGMSVV 232
                 ***************9766..*******************99997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (292 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       859  (0.0479112); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 1927.26
//
Query:       EPX72367.1  [L=1013]
Description: SAGA complex bromodomain subunit Spt7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.5e-16   58.4   0.1    1.8e-15   56.8   0.1    1.9  1  Bromodomain    Bromodomain
    2.6e-15   56.2   0.0    5.4e-15   55.2   0.0    1.6  1  Bromo_TP       Bromodomain associated
     0.0047   17.1   0.0      0.014   15.5   0.0    1.8  1  Bromo_TP_like  Histone-fold protein
  ------ inclusion threshold ------
       0.96    9.7   0.0       0.96    9.7   0.0    3.2  4  FliJ           Flagellar FliJ protein
        3.6    5.6  21.4      0.035   12.3   9.6    2.3  2  Hid1           High-temperature-induced dauer-formation prote


Domain annotation for each model (and alignments):
>> Bromodomain  Bromodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.8   0.1   5.1e-19   1.8e-15      13      75 ..     334     397 ..     322     404 .. 0.90

  Alignments for each domain:
  == domain 1  score: 56.8 bits;  conditional E-value: 5.1e-19
                  CGGGGCSTT-GCCSTTHHHH.SS---HHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHSH.TT CS
  Bromodomain  13 laepFlepvdpeefpdyyavikkPldLstIkkklesnkYksladfeadlkllfsNarkyng.eg 75 
                   + pFl  v+++  pdyy vik+P+dL t+ +kl+  +Y+s +d+ +dl l++sN+ +yn  ++
   EPX72367.1 334 HSMPFLTKVSKRDAPDYYNVIKEPMDLGTMLRKLKALQYNSKKDIVHDLMLIWSNCLTYNShPE 397
                  6779********************************************************8555 PP

>> Bromo_TP  Bromodomain associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.2   0.0   1.5e-18   5.4e-15       2      74 ..     723     794 ..     722     797 .. 0.91

  Alignments for each domain:
  == domain 1  score: 55.2 bits;  conditional E-value: 1.5e-18
                 HHHHHHHHHHHHHHHHHHT-SEE-HHHHHHHHHHHHHHHHHHHHHHHHHHTTSS-SS--HHHHHHHHHHTT-- CS
    Bromo_TP   2 elarsllkvvvsqileeaGfdsaeesaLEtLteiaqkYirelgeqaksfaehagRseptlkDvvltLqelgin 74 
                 ++a+ +lk+++s il++aGfds+ ++aL++Lt++a++Y+++ g++++++        ++ +++ +tLqelg++
  EPX72367.1 723 PIAHGVLKKLCSVILFHAGFDSFHSEALNALTDVAADYMKNAGALMEKYV-SNKQNDSKEEIISQTLQELGVS 794
                 57999********************************************9.5555566688999*******95 PP

>> Bromo_TP_like  Histone-fold protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0     4e-06     0.014       2      61 ..     728     790 ..     727     798 .. 0.89

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 4e-06
  Bromo_TP_like   2 ilklvivEillQvGferiseqslniltdllkyyiekillkikk...evdkdlleeilikllle 61 
                    +lk   + il   Gf+    ++ln ltd+ + y+++    ++k   + ++d  eei+++ l+e
     EPX72367.1 728 VLKKLCSVILFHAGFDSFHSEALNALTDVAADYMKNAGALMEKyvsNKQNDSKEEIISQTLQE 790
                    677777889****************************99999977778899999999999987 PP

>> FliJ  Flagellar FliJ protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   0.00027      0.96      41      87 ..     265     311 ..     250     317 .. 0.84
   2 ?   -2.1   1.5       1.2   4.3e+03      30      86 ..     489     546 ..     483     560 .. 0.78
   3 ?   -1.8   0.2      0.93   3.3e+03      29      54 ..     643     669 ..     638     684 .. 0.63
   4 ?   -2.8   0.1         2   7.3e+03      19      44 ..     748     774 ..     746     790 .. 0.69

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00027
        FliJ  41 glsaaelrnyqafisaldeaiaqqkqelaqaekqvekareewqearq 87 
                 g   a+++n+ +fi++ ++a+    +e++++ ++v k+r++w  +++
  EPX72367.1 265 GPFTANFKNLLNFIENNRNAVGASDSEIKHLLADVRKSRSKWANEQR 311
                 555699************************************98875 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.2
        FliJ  30 eyqkqlsgea.qglsaaelrnyqafisaldeaiaqqkqelaqaekqvekareewqear 86 
                 e  +q ++e+ q  + +e+  +++ ++   e+i+ q q+ a  + + + a e w++  
  EPX72367.1 489 EDDQQNKEEGlQPQPSSEIAEIHEEKQPAGEEISNQGQSAAEDKIDSDVAHEFWKKNS 546
                 4456666666678888899999999999999999999999999999999999998765 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 0.93
        FliJ  29 qeyqkqlsgeaq.glsaaelrnyqafi 54 
                 ++yq   +++ + g+s + +rn++++ 
  EPX72367.1 643 NNYQLWEMNSRSpGISSSMYRNISKMQ 669
                 566444455556799999999988643 PP

  == domain 4  score: -2.8 bits;  conditional E-value: 2
        FliJ  19 ekleeleqyrqeyqkqlsgea.qglsa 44 
                 e l++l++  ++y+k++ + + + +s 
  EPX72367.1 748 EALNALTDVAADYMKNAGALMeKYVSN 774
                 678889999999988888877444444 PP

>> Hid1  High-temperature-induced dauer-formation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   3.2     0.095   3.4e+02     599     649 ..     124     175 ..      97     272 .. 0.47
   2 ?   12.3   9.6   9.7e-06     0.035     532     703 ..     375     546 ..     365     551 .. 0.64

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.095
        Hid1 599 eeenssessrieesrsesrspslsevpelksslaitddesk.aereksates 649
                 +e+n+++s++  ++r+e ++ ++s++ ++++  +  +++++ +++ek++ + 
  EPX72367.1 124 SERNEHSSQENISEREELKKKTSSREVNENDYDEPDSGDDQpNSDEKQEVNG 175
                 2222222222222222222222222222222222222222202222222111 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 9.7e-06
        Hid1 532 NhkllalllealnnviqkqfkgnrnLvYsilrkrkvfealrnltlesaseeiersnesarldsideeeeenss.essrieesrsesrspslsevpelks 629
                  +++++ l+ +  n ++++ ++ + L    l+ +k  + l n++ + + + ++   e+   ++ +++eee+s+  s+++ +++++sr  ++++  e+++
  EPX72367.1 375 KKDIVHDLMLIWSNCLTYNSHPEHPLRVHALMMKKKSQELVNIIPDISIQSRKDYDETLMEADLESDEEESSEkTSKHTTSKKTSSRGGQSKRSVEVHT 473
                 4678999999999*************7777777777788888888888777776666333333444333333303344444444555555555666777 PP

        Hid1 630 slaitddeskaereksa.tessssqavsqlremsekarakesaesteesrqesatskkspsgmsqsaeekftpts 703
                  +  ++de +++ +k++ ++++++ ++   +  se a+ +e+++   e+ +++ +s+++++ +s +a+e ++++s
  EPX72367.1 474 DVPNSPDEGEKQGRKEDdQQNKEEGLQ--PQPSSEIAEIHEEKQPAGEEISNQGQSAAEDKIDSDVAHEFWKKNS 546
                 777777765555444430333333333..4667777777777777777777777778888888888888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1013 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1446  (0.0806515); expected 358.6 (0.02)
Passed bias filter:                      490  (0.02733); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.86u 0.30s 00:00:01.15 Elapsed: 00:00:00.48
# Mc/sec: 6377.46
//
Query:       EPX72368.1  [L=560]
Description: chaperonin-containing T-complex eta subunit Cct7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   7.4e-155  516.3   0.7   8.4e-155  516.1   0.7    1.0  1  Cpn60_TCP1   TCP-1/cpn60 chaperonin family
     0.0092   15.2   0.1       0.53    9.5   0.0    2.3  2  Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase


Domain annotation for each model (and alignments):
>> Cpn60_TCP1  TCP-1/cpn60 chaperonin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  516.1   0.7  9.4e-159  8.4e-155       1     490 [.      36     528 ..      36     529 .. 0.98

  Alignments for each domain:
  == domain 1  score: 516.1 bits;  conditional E-value: 9.4e-159
                 HHHHHHCCSSTTXXEEEEEETTSEEEEEXSHHHHHHCSXXXSHHHHHHHHHHHHCCCCCTTCHHHHHHHHHHHHHHHHHHHHCTXXHHHHHHHHHHHHH CS
  Cpn60_TCP1   1 ladivkttlGPkGmdKmlvnkggkvvvTnDGatilkeleiehPaakllveaaesqdeevGDGTttvviLageLleeaekliaagvhpttiiegyekale 99 
                 ++d+++ttlGP G dK+ v++ g+vv++nDGati+k l+i hPaak+lv++a++qd evGDGTt+vv++ageLl+ea +++++gv    ii+gy+ka++
  EPX72368.1  36 VQDTIRTTLGPLGADKLMVSDRGEVVISNDGATIMKLLDIVHPAAKTLVDVARAQDAEVGDGTTSVVVFAGELLREARNFVEDGVSSHSIIRGYRKAAQ 134
                 5799*********************************************************************************************** PP

                 HHHHHHHHHXEEBXSC..STT.HHHHHHHHHHCTTSSXXSTHHHHHHHHHHHHHCHCCCSEECSCCCEECCCCEECECTTSEEESEEEESS--SST... CS
  Cpn60_TCP1 100 kaleaLkeiaveisse..ekdreeLlkvartslsskltskeaeelsklvvdAvklieenekeldlgrikvvkieggsledselveGlvldkgvlsp... 193
                  a++++ke a+ ++ +   k r+ L+k+a+t++sskl+++++ +++++vvdAv++++ +  +l+ + i+++k+ ggs+eds+lv+G++++k+++++   
  EPX72368.1 135 LAVNKIKELAIHLDLSdeAKLRDLLMKCAATAMSSKLIRSNSSFFTNMVVDAVLTLDRE--DLNEDLIGIKKVPGGSMEDSQLVNGVAFKKTFSYAgfe 231
                 ******988776665544779999*****************************888666..599999*****************************999 PP

                 TSSCEEECEEEEEESS-BS--HHCCHHHCCCCSCCHHHHHHHHHHHHHHHHHHHHHHTTECEEEESS-B-HHHHHHHHHCT-EEE-S--HHHHHHHHHH CS
  Cpn60_TCP1 194 dmpkklenakvllldvsLeiektetkttvvlsdaeeleklekaeekqleellekiiksgvnvvvcqkgiddlalhflakngilalrrvkkkdlerlaka 292
                 + pk ++++k+l+ldv+Le + ++ +++v++++++e++++++ae++++  +le+i+++g++vv++   i dla++++a+++i+++ rv ++dl+r+ +a
  EPX72368.1 232 QQPKYFKDPKILCLDVELELKAEKDNAEVRVDKVQEYQNIVDAEWRIIFSKLEAIVATGAKVVLSRLPIGDLATQYFADRDIFCAGRVANDDLNRVIQA 330
                 99************************************************************************************************* PP

                 HT--EBSCGGGGGCGC-EEEEEEEECCETTCCEEEEECESSSSXEEEEEEESTCCCHHHHHHHHHHHHHHHHHHHHHHEEEETTTCHHHHHHHHHHCCC CS
  Cpn60_TCP1 293 tGatavssledltpeelGtakkveeekigsekttiieevksgkiatillrgatdtvldeieraiedAlnvvknaiedekvvpGGGatelelakklkeya 391
                 +G+++ s+ +++++ +lGt++++ee+++g e++ ++e+++ +k++t++lrg  d++++e+er+++dA+ +vk+a++++ vv+GGGa e+el+++l++y+
  EPX72368.1 331 VGGSIQSTCSNIEERHLGTCSTFEERQVGGERFNLFEGCPRSKSCTLILRGGADQFIAEVERSLHDAIMIVKHALKNNLVVAGGGACEMELSRYLRDYS 429
                 *************************************************************************************************** PP

                 CTSXCCHHHHHHHHHHHHTHHHHHHHHHCTSXHHHHHHHHHHHHHTTXTTEEEETTTTCEEECCCCTXEEEHHHHHHHHHHHHHHHHHHHCEEEEEXXX CS
  Cpn60_TCP1 392 ksvsgeeqlaieafakALevipktLaeNaGldpievlaklraahnkgekelgidvesgeiidlveagvvDplkvkrqalksAteaastiLrideiikak 490
                  ++sg++q  i afa++Lev+p++L+ NaG+d++++l+klr +h+kg+k++g+d++s+ + + +e+ v++p +vk++a+ sAteaa+++L++de+i+++
  EPX72368.1 430 LTISGKQQNFIGAFARSLEVVPRQLCDNAGFDSTDILNKLRMMHAKGDKWAGVDMASEGVANNFEKFVWEPSSVKSNAIMSATEAATLVLSVDETIMNE 528
                 ************************************************************************************************976 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.4   0.0    0.0041        37      80     152 ..     255     335 ..     184     342 .. 0.69
   2 !    9.5   0.0     6e-05      0.53     124     165 ..     388     429 ..     368     463 .. 0.82

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.0041
                  ESCEEEEETEEEC.......TCEEEEEESEEEE---EEE-BCTCT.TC.TTBEECCSECHHHHHHCCSS-TSEEEEES-SH CS
                  xxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2  80 pgkkkvklekkke.......gdeekiaydklvlAtGssprdlgip.GvaenvgklvrtldsaealklkllpkrivvvGgGy 152
                  +++++v + k +e       ++   +   + ++AtG++  +  +p G+  ++++  r +  a ++  + l++ i  vGg+ 
   EPX72368.1 255 KDNAEVRVDKVQEyqnivdaEWRIIFSKLEAIVATGAKVVLSRLPiGDLATQYFADRDIFCAGRVANDDLNRVIQAVGGSI 335
                  44444444333334444422333333335679********99999999999999999999999999999999999999975 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 6e-05
                  EECCSECHHHHHHCCSS-TSEEEEES-SHHHHHHHHHHHHHT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 124 gklvrtldsaealklkllpkrivvvGgGyiGvElAaalaklg 165
                   ++ r+l++a  + ++ l++++vv GgG++ +El+ +l+++ 
   EPX72368.1 388 AEVERSLHDAIMIVKHALKNNLVVAGGGACEMELSRYLRDYS 429
                  5566889999999999999******************98774 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (560 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       404  (0.0225333); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.34s 00:00:01.00 Elapsed: 00:00:00.53
# Mc/sec: 3154.79
//
Query:       EPX72369.1  [L=2194]
Description: DNA polymerase epsilon catalytic subunit A Pol2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   2.4e-133  444.6   4.7   3.9e-133  443.9   4.7    1.3  1  DUF1744         Domain of unknown function (DUF1744)
    6.9e-81  272.0   3.8    7.2e-81  271.9   0.8    2.5  2  DNA_pol_B_exo1  DNA polymerase family B, exonuclease domain
      5e-15   55.2   0.7    4.1e-12   45.6   0.1    4.0  4  DNA_pol_B       DNA polymerase family B
    2.5e-09   37.1   0.2    8.6e-09   35.4   0.2    1.9  1  DNA_pol_B_exo2  Predicted 3'-5' exonuclease related to the ex
    0.00034   20.6   0.1     0.0023   17.9   0.1    2.6  1  RNase_H_2       RNase_H superfamily
  ------ inclusion threshold ------
       0.29   11.1   0.0       0.29   11.1   0.0    2.7  3  DUF816          Baculovirus protein of unknown function (DUF8


Domain annotation for each model (and alignments):
>> DUF1744  Domain of unknown function (DUF1744)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  443.9   4.7  1.3e-136  3.9e-133       2     400 ..    1491    1877 ..    1490    1878 .. 0.95

  Alignments for each domain:
  == domain 1  score: 443.9 bits;  conditional E-value: 1.3e-136
     DUF1744    2 eklykeelekkeekeekkeelieypeklkfeveyvkdekkalkalsralkklkeeksgptllvlqspkelkkleskipalsefPvvklpsnkaessl 98  
                  e ly+e+++k   ++  k ++ieype++kf+++y k+ekka+k +++ + ++   k+++ llv+++++  +kle++++ l+e+P+  l+ +  e+ +
  EPX72369.1 1491 EDLYHEMRHK--YSDVLKVSAIEYPEDIKFSISYSKNEKKAYKLINERILQYLAAKTKNSLLVIETTSP-EKLEENLKQLEELPYTLLTRR--ETMV 1582
                  7899999999..55555799***********************************************99.****************99999..999* PP

     DUF1744   99 palgWqsvvakrlvehylklgswlaelielaryadvPlgnlesddllfliDiffaRrLkksnvvLWwsesprPDlGGlekDdklealslleelespe 195 
                  ++l+W+++v+k++++h+l++g+w++++i+l+ry+d+P++n+esd+l+++iD+++aR+Lk++n++LWw+++p+PDlGGlekDd   +l+ ++ ++s+e
  EPX72369.1 1583 QSLSWKQYVSKKMIQHFLAVGAWINHRIQLSRYGDIPFCNFESDELQYVIDLQYARKLKEQNIILWWNKGPMPDLGGLEKDD---VLHVASPNDSLE 1676
                  *********************************************************************************9...55678999**** PP

     DUF1744  196 innpgaYssvcveleirnLavntilqsalinelEgssssvafddasseeldeyekgeaessssldesalssaafrvLrslvkswlddalkgnkladl 292 
                  in++gaYss+cv+++ +nLav+++l+saline+Eg+++ +a++d      +++ +++ e++  + ++   ++++ vL++l+k+w+++a+ gn+ladl
  EPX72369.1 1677 INRSGAYSSACVDVSFSNLAVCSVLNSALINEIEGANDLAALNDGF----TANVTDDLEARLGMYDTVGLAHSLPVLKELIKRWWQEAAGGNTLADL 1769
                  ************************************9988777732....23333456678888899999*************************** PP

     DUF1744  293 lvqhlvrWvespsslLyDpaLrrlvqnlmkKvflqLlaefkrlgskvvyAdfnkillkTsKksvenayaYveyilkairskelFkflelkikkyWdl 389 
                  ++qhl rW++s++s+Ly p L +++q +mkK+flqLlae+krlg+++vyA +n+i++ TsK++v+na++Y++yilk++++ +lF+fl+l+i++yWd+
  EPX72369.1 1770 MIQHLARWINSSKSYLYSPLLVSHIQVVMKKTFLQLLAEIKRLGAQIVYATTNRIIIGTSKTTVQNAISYTKYILKSLKTLPLFHFLDLNIQEYWDY 1866
                  ************************************************************************************************* PP

     DUF1744  390 LlwmDeaNygG 400 
                  LlwmD++NygG
  EPX72369.1 1867 LLWMDPVNYGG 1877
                  *********** PP

>> DNA_pol_B_exo1  DNA polymerase family B, exonuclease domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  271.9   0.8   2.4e-84   7.2e-81       2     337 .]      97     426 ..      96     426 .. 0.97
   2 ?   -0.5   0.1      0.18   5.3e+02      58     134 ..    1263    1339 ..    1241    1444 .. 0.62

  Alignments for each domain:
  == domain 1  score: 271.9 bits;  conditional E-value: 2.4e-84
                     ECTTSEEEEEEEE---EEEEEESSCGGHHHHHHHHHHHCCTTCCCEEEEEEEECCCCEECCTSSCCHHCEEEEEESSTCHHHHHHHHHHH..... CS
  DNA_pol_B_exo1   2 teegksvcvnvfgfkpyfYceapdgkeleevkeelkelyeelskkvtkivkvelvlkkslygyekkpvpylkvsvsnpnelkkirkelsp..... 91 
                     +e++++ +  + ++ pyfY++a++gk++ +v+e++k+ + +l k+ ++ +k++l+lk++++gy+k    y+k++++n ++l+++r++l++     
      EPX72369.1  97 IEDDGETFRVTIPHSPYFYISAREGKTA-NVEEYIKKNFAGLVKSTSREFKEDLKLKNHIVGYKKL---YIKLTFDNLTDLQSVRRTLMSavksn 187
                     688999999999***************9.*************************************...************************** PP

                     ............................CCCCCCCCSSS--HHHHHHHHCTS-TTCEEEEETEEEEGCC--C-.SEEEEEETTTSCEETTTCC.S CS
  DNA_pol_B_exo1  92 ............................leeivdvyeydvdylerflidnkivgfgwysvkkylvraegkisncdveidcdvddliakpkese.p 157
                                                  ++i+d +e+dv+y+ r lid +i+++ wy+v+                +    +++++ p+  e +
      EPX72369.1 188 nakeeafntyaslndsndlaldtsyddpMDHIMDLREFDVPYHARTLIDLNIRVGMWYTVS----------------FREGEPQIVPLPTRIErA 266
                     ****************************99*******************************................56666677777766667* PP

                     -EEEEEEEEEETEETTSEETTTT..--EEEEEEEECCTC.SS.SEEEEEEECCCTSS----EE--SSTCSTTE.EEEEESSHHHHHHHHHHHHHH CS
  DNA_pol_B_exo1 158 plrvlsFDIeckskkgkfpdaensedpiiqIscvldglgekepearklftlrecaseeeedfeltpkpeypgv.kvlefdsEkelLqaflefikq 251
                     ++++++FDIe++++++kfpd++   d+i++Is+++dg+g       +l+t+re++ e++edf++tpkpe++g+  ++++++E  lL++f++++++
      EPX72369.1 267 EPTIMAFDIETTKLPLKFPDSSF--DKIMMISYMVDGQG-------FLITNREIVGEDIEDFHYTPKPEFEGPfIIFNEQDELSLLHRFFKHVRS 352
                     ***********************..**************.......************************************************* PP

                     H--SEEEESSTTTTHHHHHHHHHHHCCTCCHCG.SCCSCTCEECCCCESEEEEEECEEEETTSEEEEHHHHHHHHSSSS..G-SHHHH CS
  DNA_pol_B_exo1 252 ydPdvitgYNidnFDlpYilnRakelykvklsklgrlnkggrskvseigfskqarekvkisgrihlDlyrvvkrklklp..sYkLnav 337
                      +P++i++YN+d+FD+p++ +R +               +g++  +eigfs++a++++k+s++ h+D +r+vkr+++lp  s+ L+av
      EPX72369.1 353 ARPTIIVTYNGDFFDWPFVDARTT--------------FHGLNLAEEIGFSRDAEDEYKSSYCTHMDAFRWVKRDSYLPqgSQGLKAV 426
                     ************************..............9***********************************************98 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.18
                      CEECCTSSCCHHCEEEEEESSTCHHHHHHHHHHHCCCCCCCCSSS--..HHHHHHHHCTS-TTCEEEEE.......TEEEEGCC-- CS
  DNA_pol_B_exo1   58 kkslygyekkpvpylkvsvsnpnelkkirkelspleeivdvyeydvd..ylerflidnkivgfgwysvk.......kylvraegki 134 
                      +++l+g++ ++  ++ v+ s+ ++++   ++l    +iv+++++d +   + +++i+n++++ ++ +++       k++  ++  i
      EPX72369.1 1263 RRHLVGFQSRQ--FTNVFKSSAENMY---QNL---WHIVQIRNTDSPgvLHAWVIINNRLTSVRF-NLQrkfyicfKDNNLPNVEI 1339
                      56666666664..3333333333332...233...355777777776555677777777777665.44423333333333333333 PP

>> DNA_pol_B  DNA polymerase family B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.12   3.7e+02       6      58 ..     491     551 ..     487     560 .. 0.70
   2 !    3.7   0.0    0.0069        21      60      81 ..     619     640 ..     611     652 .. 0.84
   3 !   45.6   0.1   1.4e-15   4.1e-12     144     456 ..     791    1141 ..     769    1143 .. 0.70
   4 ?   -2.8   0.0      0.64   1.9e+03     207     273 ..    1802    1864 ..    1776    1871 .. 0.74

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.12
                 HHHS-HHHHHHHHHHHHHHHTTBE-B-......----.--SS...........-S----BE----EEES CS
   DNA_pol_B   6 vledgqqirveslLlrlakeegfilpd......rtekkgkeee..........gYqGatVlePkkglyd 58 
                 vl +g  +  e+lL  +a+ +++ilp+      +        +          +Y G+ V + + g++ 
  EPX72369.1 491 VLRKGTGTLCETLLTVEASANNIILPNkhveapQ--------KfydghmltseTYVGGHVESLECGVFR 551
                 7889999999****************74333220........123455555545888888766666665 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.0069
                 -EEEEEETTHHHHHHHHTT-ST CS
   DNA_pol_B  60 pvlvlDFaSLYPsiiqahNlcy 81 
                 ++  lD aS+YP+i++ + l +
  EPX72369.1 619 KIYHLDVASMYPNIMITNRLQP 640
                 5788************987766 PP

  == domain 3  score: 45.6 bits;  conditional E-value: 1.4e-15
                  --HHHHHHHHHHHHHHHHHHHHHHHHHTSTTSTT--HHHHHHHHHHHHHHHHHHHHHHHHT...SSG.....GGT-SS......T-EEEEEBSSEEE CS
   DNA_pol_B  144 kdefekalldkqQlalKvtaNsvYGftGvansrlpclalAasvTtiGRemLektkelvekkaellsk.....llalpeea.eeeklkviYGDTDSvf 234 
                  + +++  l+d+ Qla Kv+ Ns+YG++  + sr +++++A     +G  ++++++++ve+ ++ l+       + lpe++ e++++k + G    vf
  EPX72369.1  791 EAKKMVILYDSLQLAHKVILNSFYGYVMRKGSRWYSIEMAGITCLTGASIIQMARQIVERAGRPLELdtdgiWCILPESFpENYEFKRKSGG--KVF 885 
                  33445779***************************************************883333332234333334433233366666664..678 PP

                  EE-...........S-.SSHHHHHHHHHHHHHHHHT.TSTTT--EEEEEEEEEEEE........EETTEEEEEEEEESSTTSE.EEEESSGGGSTTS CS
   DNA_pol_B  235 iel...........kv.kdveellkigkelaeevseklfkkplklefekvykkllL........isKKkYaglkvektskank.lliKGvdlvRrdn 310 
                  i+            k  ++  +llk  ++l+ e+++   ++ +  e++  y  ++L        + KK+Ya + ++     ++  + KG ++ Rr+ 
  EPX72369.1  886 ISYpcvmlnhlvheKFtNHQYSLLKNPDTLEYETTS---ENSIFFEVDGPYRAMILpaskeegkTLKKRYAVFNFD-----GSlAELKGFEVKRRGE 974 
                  877777777788763324445667777777777777...778**************555544444599***99999.....54489*********** PP

                  -HHHHHHHHHHHHHHSSS....S-HHHHHHHHHHHHHHHHHHHHTT-S...-GGGG-E...EEEESS.CCCSSGCCSHHHHHHHHHHHHC.SS-.-- CS
   DNA_pol_B  311 cklvkevikkvlelllkdeteersleeglealksilkdvleeleenkv...plekfvl...skelskepenyksknlphlevakrlkkrn.eea.pe 399 
                   kl+k+  +++ +  lk     + lee+ +++  + ++ le l ++     + e f l   ++++sk+ ++y s++   ++ akrl+     +    
  EPX72369.1  975 LKLIKDFQSQIFKIFLKG----NTLEECYKEVALVADTWLEVLFTKGKnvtDDELFELiseNRSMSKSLAEYGSQKSTSITTAKRLADFLgDQMvKD 1067
                  ******************....555555555555544444433332220123344433112678999999**8888899999999998764344134 PP

                  TTCEEEEEEBETSS......................SS-GGGTEEEH.HHHHHCCSEB-HHHHHHTTHHHHHHHH CS
   DNA_pol_B  400 vgdrisYvivekkkev.................kkknllaseraedp.eyvleknlpidieyYlsqllkevarll 456 
                   g   +++i ++ k                    k++ l+  + +d+  y ++ +  +d +yY+++l + v +l+
  EPX72369.1 1068 KGLACKFIISSSPKGSpvaeraipvaifsteesVKRHFLQLWL-KDNsLYNIDIRDVLDWNYYIERLGSVVQKLI 1141
                  4556788888777766788888888888877533333333333.4444777888888899999998888888776 PP

  == domain 4  score: -2.8 bits;  conditional E-value: 0.64
                  .SSGGGT-SS.....T-EEEEEBSSEEEEE-S-SSHHHHHHHHHHHHHHHHT.TSTTT--EEEEEEE CS
   DNA_pol_B  207 llskllalpeeaeeeklkviYGDTDSvfielkvkdveellkigkelaeevseklfkkplklefekvy 273 
                  +l+ l+++    +  +++++Y  T  + i ++ ++v+++++  k + + +++  +++ l l++ + +
  EPX72369.1 1802 FLQLLAEI----KRLGAQIVYATTNRIIIGTSKTTVQNAISYTKYILKSLKTLPLFHFLDLNIQEYW 1864
                  33333333....3358999999999999999999999999999999999988888888888877655 PP

>> DNA_pol_B_exo2  Predicted 3'-5' exonuclease related to the exonuclease domain of PolB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.4   0.2   2.9e-12   8.6e-09      34     175 ..     336     474 ..     331     475 .. 0.79

  Alignments for each domain:
  == domain 1  score: 35.4 bits;  conditional E-value: 2.9e-12
  DNA_pol_B_exo2  34 essekelikkffegvekkkpq.lVsfngrgfDlpvleyralkhgvsapkyfdegdedrekkwnnylsrystrhlDLmdlls..eygaranakLd. 124
                     e++e +l+++ff++v++++p+ +V++ng  fD p +  r+  hg++ ++ +  ++    +  ++y s y t h+D    +   +y ++ ++ L+ 
      EPX72369.1 336 EQDELSLLHRFFKHVRSARPTiIVTYNGDFFDWPFVDARTTFHGLNLAEEIGFSR----DAEDEYKSSYCT-HMDAFRWVKrdSYLPQGSQGLKa 425
                     67899**************98359*********************9988777766....334556666654.77777777522577777777761 PP

  DNA_pol_B_exo2 125 .elakllglPGKlgvdGskVaelyqegklkeireYcetDvlnTYlvylrlel 175
                      ++akl   P  +++d  + +++y+++k +++++Y  +D++ TY +y+++++
      EPX72369.1 426 vTVAKLGYNP--MELD-PELMTIYASEKAQTLAQYSVSDAVATYYLYMKYVH 474
                     1456666666..5554.46899***************************975 PP

>> RNase_H_2  RNase_H superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.1   7.7e-07    0.0023      40     119 ..     336     436 ..     271     473 .. 0.74

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 7.7e-07
   RNase_H_2  40 epeeekailelf.lellekkkalvtfngksFDvpflkrlf..kkyklde..............eefrhiDLlkelrkkkl....esysLksveke.lgi 116
                 e++e + + ++f   + ++ + +vt+ng  FD+pf+  +   +  +l e                  h+D ++++++  +    +  +Lk+v  + lg+
  EPX72369.1 336 EQDELSLLHRFFkHVRSARPTIIVTYNGDFFDWPFVDARTtfHGLNLAEeigfsrdaedeyksSYCTHMDAFRWVKRDSYlpqgS-QGLKAVTVAkLGY 433
                 33444455566634445556889**************99977444444455666687777766667*********9999999954.5999987666888 PP

   RNase_H_2 117 err 119
                 +  
  EPX72369.1 434 NPM 436
                 765 PP

>> DUF816  Baculovirus protein of unknown function (DUF816)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.6       0.5   1.5e+03      22      76 ..     127     181 ..     122     203 .. 0.74
   2 ?   11.1   0.0   9.6e-05      0.29     108     168 ..    1225    1288 ..    1215    1292 .. 0.87
   3 ?   -3.1   0.1       2.2   6.5e+03      80     143 ..    1530    1596 ..    1516    1605 .. 0.64

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.5
      DUF816  22 aellvanvleivekaidkykeePtdknyky.lkklfdkikylideidekdferrll 76 
                 +e +  n   +v ++   +ke+   kn+    kkl+ k++ +++  d +   r l+
  EPX72369.1 127 EEYIKKNFAGLVKSTSREFKEDLKLKNHIVgYKKLYIKLT-FDNLTDLQSVRRTLM 181
                 567888999999999*******999997533799999987.466666666666555 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 9.6e-05
      DUF816  108 nkisidlkddPrdllklynehlelldnnv...qdtrkrehhllefvkklfveavkssytdskhn 168 
                  n++++ ++++P ++++ y   l+ l ++    +++r r  hl+ f  + f +++kss ++  +n
  EPX72369.1 1225 NDTQVSFNEKPVSIVEGYSAWLKYLKKKWkyqKQVRIRRRHLVGFQSRQFTNVFKSSAENMYQN 1288
                  8899999*****************9987522268999*******************99998776 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 2.2
      DUF816   80 lkvilekakkyv..ksknpkeiieval.krlnkisidlkddPrdllklynehlelldnnvqdtrkre 143 
                  +k+i e+  +y+  k+kn   +ie+   ++l++   +l++ P  ll   +++++ l  +   ++k  
  EPX72369.1 1530 YKLINERILQYLaaKTKNSLLVIETTSpEKLEENLKQLEELPYTLLTRRETMVQSLSWKQYVSKKMI 1596
                  4555666666652245566677776542678888888888888888888888777765544444544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2194 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       591  (0.0329634); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.16u 0.33s 00:00:01.49 Elapsed: 00:00:00.55
# Mc/sec: 11924.62
//
Query:       EPX72370.1  [L=119]
Description: hypothetical protein SOCG_00134 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-20   73.3   0.0    1.3e-20   73.1   0.0    1.1  1  DUF3767       Protein of unknown function (DUF3767)
  ------ inclusion threshold ------
       0.11   12.0   0.1       0.15   11.6   0.1    1.1  1  5TM-5TMR_LYT  5TMR of 5TMR-LYT
       0.12   12.2   0.0       0.12   12.1   0.0    1.2  1  UPF0669       Putative cytokine, C6ORF120


Domain annotation for each model (and alignments):
>> DUF3767  Protein of unknown function (DUF3767)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.1   0.0   2.2e-24   1.3e-20       3      92 ..      11     100 ..       9     109 .. 0.93

  Alignments for each domain:
  == domain 1  score: 73.1 bits;  conditional E-value: 2.2e-24
     DUF3767   3 slsdavktisledfsklvsiPCaRdslltGigagavvGglrfvlkknvakaaNWavgafllgsivayeqCrarrrkekekmkravevvke 92 
                 s+ +a+k+++++df ++ + PC+++s++t++ +g++vG +++ +k++ +ka+NW+ g+++  s+v++e C++r++ e ++ +  +++ ++
  EPX72370.1  11 SIVQAFKSLRKDDFVHMLHHPCFKESTITSVLCGIGVGCIHLFMKAPRSKALNWGFGTYFGMSLVSWEGCNYRKQLETQNFNIQIQEAAQ 100
                 7899***************************************************************************99888777655 PP

>> 5TM-5TMR_LYT  5TMR of 5TMR-LYT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   2.5e-05      0.15      87     122 ..      38      74 ..      35      80 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2.5e-05
  5TM-5TMR_LYT  87 istilagllaGlihrklkrrr.kkltvlvalligllv 122
                   i+++l g+ +G+ih ++k  r k+l+++ +  +g+ +
    EPX72370.1  38 ITSVLCGIGVGCIHLFMKAPRsKALNWGFGTYFGMSL 74 
                   89****************9889********9999976 PP

>> UPF0669  Putative cytokine, C6ORF120
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0     2e-05      0.12      55     107 ..       8      57 ..       4     118 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2e-05
     UPF0669  55 hegkiilrlqslkgdadlyvsdstlkpsfdeyelqsvtcgadvvsipahfrrp 107
                  eg i+  ++sl+ d  +   ++  +p f e  + sv cg  v  i   ++ p
  EPX72370.1   8 QEGSIVQAFKSLRKDDFV---HMLHHPCFKESTITSVLCGIGVGCIHLFMKAP 57 
                 69***********99654...5788***************9887776665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       435  (0.0242624); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.28s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 821.80
//
Query:       EPX72371.1  [L=238]
Description: UNC-50 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      3e-77  259.1  19.2    3.6e-77  258.9  19.2    1.0  1  UNC-50         UNC-50 family
    0.00084   19.2   8.7     0.0011   18.8   8.7    1.2  1  DUF1282        Protein of unknown function (DUF1282)
  ------ inclusion threshold ------
        9.8    6.5   8.6         28    5.1   2.0    2.9  3  Orf78          Orf78 (ac78)


Domain annotation for each model (and alignments):
>> UNC-50  UNC-50 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  258.9  19.2   6.1e-81   3.6e-77       4     221 .]      10     234 ..       8     234 .. 0.98

  Alignments for each domain:
  == domain 1  score: 258.9 bits;  conditional E-value: 6.1e-81
      UNC-50   4 rlfkfkqlDfetAlwemlhLiiaPkkvyrsiyyrkqtknqyaRdDPafliLlvlllllsaiawglayssslleilklilvmvlvdfllvglliatvlwl 102
                 r fk++q+D+e +lw+m++L+ aP++vyrsi+ r +t nqy R+D +f+iL+++l+++++++w+l++++sl ++++l+++m++vdfl+vg+++++++++
  EPX72371.1  10 RSFKLSQMDLERSLWDMANLFRAPRRVYRSINLRVKTINQYGREDLSFIILFSTLIIFTSFCWALFFENSLKGYISLLCSMLFVDFLAVGFILSSIYYF 108
                 88************************************************************************************************* PP

      UNC-50 103 lvnrlllksek........seqdvewaYcFDvhlnaflpilvllyvlqllllplilkkkfvslllgntlylvaigyYfyitflGYnalpflkktevlll 193
                 +++r+llk+           ++++ew+YcFD+h+n+f+p++vlly++ql+llp+i+ ++f+sl+lgn+lylva++yY+y+tf+GY++lpflk t++ll+
  EPX72371.1 109 VAKRFLLKDIYresasigsFQNQLEWKYCFDIHCNSFFPVFVLLYIIQLILLPIISGSNFISLFLGNSLYLVALCYYTYLTFIGYQTLPFLKDTHTLLI 207
                 *******66556778899899****************************************************************************** PP

      UNC-50 194 pllllavlylitlllgfnvakslvslyf 221
                 p++++++++ + +llg+nv ++++s+yf
  EPX72371.1 208 PIPMFLIMWAL-SLLGYNVPQHIISVYF 234
                 ***********.*************997 PP

>> DUF1282  Protein of unknown function (DUF1282)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   8.7   1.8e-07    0.0011      22     168 ..      60     218 ..      29     222 .. 0.80

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 1.8e-07
     DUF1282  22 lyivlillllliglvvfiystfqvlseiltkqankltlassliisvvfylalgvlvlayliklmgrtyd..sqhsyskifafaayalvplf.lgglalg 117
                 l+++li+  + +++  f +s+    s   + +   + la+++i+s + y+++  ++l  +++  +++    +q +++ +f +    ++p+f l+ ++ +
  EPX72371.1  60 LFSTLIIFTSFCWALFFENSLKGYISLLCS-MLFVDFLAVGFILSSIYYFVAKRFLLKDIYRESASIGSfqNQLEWKYCFDIHCNSFFPVFvLLYIIQL 157
                 577778888888888888888844444444.555677899**********************9999954568888**************9834445555 PP

     DUF1282 118 lsllllva..........lvslllllyvvvLlylGvptlmnirekdraiviallvlvvsll 168
                 ++l +  +          +  l++l+y+ +L + G +tl  ++++  +++ + + l++++l
  EPX72371.1 158 ILLPIISGsnfislflgnSLYLVALCYYTYLTFIGYQTLPFLKDTHTLLIPIPMFLIMWAL 218
                 544444447********999**********************9999888877776666665 PP

>> Orf78  Orf78 (ac78)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.23   1.4e+03      20      75 ..      13      68 ..      11      76 .. 0.69
   2 ?    5.1   2.0    0.0047        28      67      90 ..      89     112 ..      77     125 .. 0.76
   3 ?    3.3   1.2     0.017     1e+02      66      85 ..     138     157 ..     116     163 .. 0.76

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.23
       Orf78 20 KLAlndldnddndkaenkkekksaaeknditekesnaaekaqalnillisllavvc 75
                KL   dl+ +  d a+  +  ++++ + +++ k+ n+  ++    i+l+s l +++
  EPX72371.1 13 KLSQMDLERSLWDMANLFRAPRRVYRSINLRVKTINQYGREDLSFIILFSTLIIFT 68
                55556666666666666666667777777777777777788888888888887776 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.0047
       Orf78  67 lisllavvcvlvllyviyYfvilr 90 
                  + ++ +++v  +l  iyYfv  r
  EPX72371.1  89 SMLFVDFLAVGFILSSIYYFVAKR 112
                 35567899*************877 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.017
       Orf78  66 llisllavvcvlvllyviyY 85 
                 + i   +++ v+vlly+i  
  EPX72371.1 138 FDIHCNSFFPVFVLLYIIQL 157
                 55667789*********975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       701  (0.0390987); expected 358.6 (0.02)
Passed bias filter:                      258  (0.0143901); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.29s 00:00:00.76 Elapsed: 00:00:00.46
# Mc/sec: 1549.38
//
Query:       EPX72372.1  [L=394]
Description: programmed cell death protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-37  129.7   2.6    1.6e-36  126.0   0.2    2.4  2  PDCD2_C   Programmed cell death protein 2, C-terminal putativ
  ------ inclusion threshold ------
        0.1   12.4   0.1       0.34   10.7   0.1    1.9  2  DUF3039   Protein of unknown function (DUF3039)
       0.42   10.4   5.1        5.1    6.9   0.1    3.1  3  YdjO      Cold-inducible protein YdjO


Domain annotation for each model (and alignments):
>> PDCD2_C  Programmed cell death protein 2, C-terminal putative domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.2     0.014        87      84     121 ..      30      63 ..      22      68 .. 0.70
   2 !  126.0   0.2   2.6e-40   1.6e-36      37     175 .]     249     393 ..     231     393 .. 0.81

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.014
     PDCD2_C  84 RYelggkPLwlsskkspeeesdipkCsnCgskrvFEfQ 121
                  + lg +P ++ +  s +   d  +C nC+s   F fQ
  EPX72372.1  30 TF-LGDTPVFFEN-VSINP--DDIRCGNCNSYCRFLFQ 63 
                 34.4889999994.33333..3457*******999999 PP

  == domain 2  score: 126.0 bits;  conditional E-value: 2.6e-40
     PDCD2_C  37 lse.eeeeekskeekes....eeeelekyeksl...dktfekFkkriaaepeQvlRYelggkPLwls.........skkspeeesdipkCsnCgskrvF 118
                 ++e +++ + ++    +     ++e+e+yeks    +k+f+kF + i+++p Q++RYe+ggkPL++s         +++ ++++   p C+ C+s+r+F
  EPX72372.1 249 MKEgSSSFKMQE----TmdsyGNWENESYEKSPavyEKAFRKFIELISHNPTQCVRYERGGKPLLASnrdvvgkmfKTTDSYTN-FFPVCPLCKSPRIF 342
                 233222222222....1344699******9665689***************************************865556665.9************* PP

     PDCD2_C 119 EfQlmPqlinvLeveeeekesldWgtilVytCeksCeekeeeeneegyveEfvlvQw 175
                 E+QlmP  i+vL+      e  +W+tilV tC+ +C++   ++n++gy++E+v+vQw
  EPX72372.1 343 EMQLMPYSISVLND-----EVAEWSTILVATCSMDCKP-PLNKNQVGYAKEWVGVQW 393
                 *************6.....467**************85.45679************9 PP

>> DUF3039  Protein of unknown function (DUF3039)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0      0.74   4.4e+03      39      54 ..     206     221 ..     203     222 .. 0.85
   2 ?   10.7   0.1   5.7e-05      0.34      31      51 ..     317     338 ..     311     344 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 0.74
     DUF3039  39 dpkkfPvCpeCkeiye 54 
                 d++++P+ p+   +ye
  EPX72372.1 206 DAQNMPIHPQVTTVYE 221
                 68899**999999997 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 5.7e-05
     DUF3039  31 Gkvwvptrdpk.kfPvCpeCke 51 
                 Gk++  t + +  fPvCp Ck 
  EPX72372.1 317 GKMFKTTDSYTnFFPVCPLCKS 338
                 89999998888579******95 PP

>> YdjO  Cold-inducible protein YdjO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1      0.77   4.6e+03      25      34 ..      53      62 ..      51      67 .. 0.77
   2 ?    4.6   0.2    0.0045        27       9      27 ..      71      89 ..      63      90 .. 0.85
   3 ?    6.9   0.1   0.00086       5.1      40      57 ..     331     348 ..     323     349 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.77
        YdjO 25 dCngWmRdnF 34
                +Cn++ R  F
  EPX72372.1 53 NCNSYCRFLF 62
                6999999666 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.0045
        YdjO  9 eevpeeetkvWeCtsedCn 27
                +e +e    +W+C ++ C+
  EPX72372.1 71 DESKERALYIWACHDQACR 89
                677888999*********6 PP

  == domain 3  score: 6.9 bits;  conditional E-value: 0.00086
        YdjO  40 PtCplCkseMvkevrmLp 57 
                 P+CplCks+ + e++++p
  EPX72372.1 331 PVCPLCKSPRIFEMQLMP 348
                 9*******9888877766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (394 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       695  (0.038764); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2822.50
//
Query:       EPX72373.1  [L=542]
Description: adaptin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      4e-48  162.8   0.0    1.4e-47  161.0   0.0    2.0  3  VHS              VHS domain
    1.6e-13   51.0   2.1    1.6e-13   51.0   2.1    2.1  2  Alpha_adaptinC2  Adaptin C-terminal domain
    4.7e-07   30.0   1.5      2e-06   28.0   0.2    2.7  2  GAT              GAT domain
     0.0025   17.4   0.0     0.0071   15.9   0.0    1.8  1  GGA_N-GAT        GGA N-GAT domain
  ------ inclusion threshold ------
      0.013   14.8   0.3      0.031   13.5   0.3    1.7  1  DUF2465          Protein of unknown function (DUF2465)
      0.093   12.9   0.0       0.28   11.3   0.0    1.8  1  ORF11CD3         ORF11CD3 domain
       0.16   11.6   0.4        1.5    8.4   0.2    2.5  3  DUF2321          Uncharacterized protein conserved in bacteri


Domain annotation for each model (and alignments):
>> VHS  VHS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  161.0   0.0   5.6e-51   1.4e-47       2     141 .]       3     147 ..       2     147 .. 0.98
   2 ?   -3.2   0.1       2.7   6.9e+03      40      69 ..     176     206 ..     168     208 .. 0.68
   3 ?   -3.4   0.0         3   7.8e+03      91     120 ..     276     303 ..     269     310 .. 0.71

  Alignments for each domain:
  == domain 1  score: 161.0 bits;  conditional E-value: 5.6e-51
                 HHHHHHHHHHHHHT-TT-SS--HHHHHHHHHHHHCS.TCHHHHHHHHHHHHHT-SSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHHCTT CS
         VHS   2 ssasslekliekATdeslreedlslileicDlinek.eagpkeavrlikkkinsknphvallaLklldalvkNcGskfhleiaskeflnelvklilekk 99 
                 ss+++l +li++AT++++ e+dl+l+l+i+Dlin+  ++ p+ea+ +i +k+n++np+va+laL+lld++vkNcG+ fhl+ia+keflne+v++++e++
  EPX72373.1   3 SSKRKLYRLIQNATEPFTFEPDLALNLDITDLINQAqGNIPREAAFAIVRKVNDRNPTVAYLALNLLDICVKNCGYAFHLQIATKEFLNEFVRRFPERP 101
                 678999******************************99************************************************************* PP

                 TCHCS.HHHHHHHHHHHHHHHT....TT-TTGHHHHHHHHHHHHTT CS
         VHS 100 nsklakvkkkvlelleeWadaf....knkpelkkisdvykllkrkg 141
                 +s+l+k++ ++l+l+eeW+ ++    +++++l  i+d+++ll++kg
  EPX72373.1 102 PSRLNKIQVMILSLIEEWRRTIcrtdRYHEDLGFIRDMHRLLSYKG 147
                 *******************************************997 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 2.7
                 HHHHHHHH.HHHHHT-SSHHHHHHHHHHHHH CS
         VHS  40 gpkeavrl.ikkkinsknphvallaLkllda 69 
                 + ++a+++ ++  i   +ph  + a kl+++
  EPX72373.1 176 EDRDAMSAkLQEHIRRGTPHDLMEANKLMKV 206
                 5566666547777888888888888777765 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 3
                 HHHHHHCTTTCHCS.HHHHHHHHHHHHHHH CS
         VHS  91 lvklilekknsklakvkkkvlelleeWada 120
                 l +  + +++++  ++k+ +l ll ++ + 
  EPX72373.1 276 LDS--SDEYYNSVIDLKSLILALLCQYDHL 303
                 544..5677777778999999999887765 PP

>> Alpha_adaptinC2  Adaptin C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   2.1       3.7   9.5e+03      34      66 ..     313     347 ..     309     392 .. 0.53
   2 !   51.0   2.1   6.1e-17   1.6e-13       2     103 ..     429     531 ..     428     538 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 3.7
                      E-SSS-EEEEEEEEEEBTTCE..EEEEEES-S-B- CS
  Alpha_adaptinC2  34 Nkssqpisnfsfqaavpkslk..lqlqppsstvlp 66 
                      N+ss+  s f+ + +  k  +  l++ p+s+ + +
       EPX72373.1 313 NTSSNAHSLFQSTSNLSKDANenLTVDPASTPTPA 347
                      55555555555554444433300333333333322 PP

  == domain 2  score: 51.0 bits;  conditional E-value: 6.1e-17
                      EEEEEEETTEEEEEEEEETTSTTEEEEEEEEEE-S.SS-EEEEEEEEEEBTTCEEEEEEES-S-B-TTCEEEEEEEEEEES..CTTS-EEEEEE CS
  Alpha_adaptinC2   2 evvlyekddlqIgfkfekperpgqiritlsftNks.sqpisnfsfqaavpkslklqlqppsstvlppnpggqitqvllien..pskkplrmrlr 92 
                      +++++++ ++  ++  +k  ++g+ ++ ++++N+  s+ i+n++  +a pk + l+l+p+s+t l+p ++  i+q++ ++n    + +l+mr++
       EPX72373.1 429 PTTVFSNEHVVFQLAPKK-ITDGKYVLLATYSNSNsSKNIENLQSFIALPKKYSLELKPQSGTRLSPLQQKGIHQEMFVSNvsTDTTELPMRFK 521
                      678999998888888888.**************9889********************************************9989999999999 PP

                      EEEECTCEEEE CS
  Alpha_adaptinC2  93 isykvgqaike 103
                      ++y v++  +e
       EPX72373.1 522 FTYYVNNV-QE 531
                      99997664.44 PP

>> GAT  GAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1      0.84   2.2e+03      37      55 ..     163     182 ..     162     206 .. 0.61
   2 !   28.0   0.2   7.8e-10     2e-06       1      77 []     230     306 ..     230     306 .. 0.92

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.84
         GAT  37 qpriqklieetadeed.lla 55 
                 q+++ k +ee++ e+  ++ 
  EPX72373.1 163 QKSVLKTAEELEKEDRdAMS 182
                 66666666666444422333 PP

  == domain 2  score: 28.0 bits;  conditional E-value: 7.8e-10
         GAT   1 rnnaklLsemLsstepdeellenellkeLyetckamqpriqklieetadeedllaelLqlNDeLnnvlerYerlkkg 77 
                 +++a l+ emL++ +++++l  ++l++eL+ ++ka+  ++ k++ee+   ++  +  + l   +  +l +Y++l+kg
  EPX72373.1 230 KRKASLFGEMLNEIKESDKLTPGDLYEELAYSLKAAVIKVDKILEELDSSDEYYNSVIDLKSLILALLCQYDHLLKG 306
                 689***********96679***************************95555599******************99986 PP

>> GGA_N-GAT  GGA N-GAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   2.8e-06    0.0071       2      33 ..     177     208 ..     177     214 .. 0.90

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 2.8e-06
   GGA_N-GAT   2 edeeksklLarLLkSknpeDLqaANrLIKsmV 33 
                 +++ +s +L++ ++ + p DL +AN+L K m 
  EPX72373.1 177 DRDAMSAKLQEHIRRGTPHDLMEANKLMKVMA 208
                 6788999***********************97 PP

>> DUF2465  Protein of unknown function (DUF2465)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.3   1.2e-05     0.031      36     174 ..     255     384 ..     226     395 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.2e-05
     DUF2465  36 vawLtselkk.llkleesvnsisseddlesfllelsslLkeleCpysalvsgeveerlkskedrlkLlefLvsElqaarileskkekekekekkkkvee 133
                  + L+ +lk  + k+++ +++++s+d+  + +++l+sl+  l C+y++l++g+++++ ++ +++  L +       ++++ +  +e+ + +++     +
  EPX72373.1 255 YEELAYSLKAaVIKVDKILEELDSSDEYYNSVIDLKSLILALLCQYDHLLKGDFHSAQNTSSNAHSLFQS------TSNLSKDANENLTVDPA----ST 343
                 556777777515688999***************************************9999999999863......44555444333333333....46 PP

     DUF2465 134 esetakelkeilktLglskppanitasqlfskieekikell 174
                  +++ +  +++l+ L+++ +++ +t+++ +s+i++     l
  EPX72373.1 344 PTPASQSAMDLLIDLDIGSSMQPSTSNAQISSIQNSSPLQL 384
                 77788888888888888888888888877777777655555 PP

>> ORF11CD3  ORF11CD3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00011      0.28       9      32 ..     222     245 ..     216     248 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00011
    ORF11CD3   9 aviElkkqkaiASlaGrgLsewKq 32 
                 + +El+k k+ ASl+G  L+e K 
  EPX72373.1 222 VLVELEKVKRKASLFGEMLNEIKE 245
                 578******************985 PP

>> DUF2321  Uncharacterized protein conserved in bacteria (DUF2321)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       0.4     1e+03      70     126 ..      74     130 ..      63     140 .. 0.86
   2 ?    8.4   0.2   0.00059       1.5      83     143 ..     160     221 ..     146     233 .. 0.80
   3 ?   -2.1   0.0         1   2.6e+03      84     105 ..     316     337 ..     303     343 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.4
     DUF2321  70 kkCgkpyPWtkakleaakelieeleelsddekeklkaslpdllvdtpktklaavrfk 126
                 k+Cg ++    a+ e ++e++    e +++  +k++  +  l+ +  +t   + r+ 
  EPX72373.1  74 KNCGYAFHLQIATKEFLNEFVRRFPERPPSRLNKIQVMILSLIEEWRRTICRTDRYH 130
                 799999999999999999****99999999999999999999999999887777765 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.00059
     DUF2321  83 leaakelieeleelsddekeklkaslpdllvd.tpktklaavrfkkvlskaeksvadalrdi 143
                 + + k +++ +eel++++++ ++a+l++ +   tp+  + a+++ kv++  +++ +   ++ 
  EPX72373.1 160 VLSQKSVLKTAEELEKEDRDAMSAKLQEHIRRgTPHDLMEANKLMKVMAGYDSEHKRRYKEH 221
                 5578999*******************99876559**************98888777766654 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 1
     DUF2321  84 eaakelieeleelsddekeklk 105
                   a+ l + +++ls+d +e+l+
  EPX72373.1 316 SNAHSLFQSTSNLSKDANENLT 337
                 4577788888888888888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (542 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       650  (0.0362541); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 3896.98
//
Query:       EPX72374.1  [L=262]
Description: 40S ribosomal protein S4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.5e-38  130.5   0.7    3.2e-38  129.5   0.7    1.6  1  Ribosomal_S4e  Ribosomal family S4e
    1.2e-26   92.1   0.1    2.5e-26   91.0   0.1    1.6  1  40S_S4_C       40S ribosomal protein S4 C-terminus
    3.6e-19   68.6   8.2    7.6e-19   67.5   8.2    1.6  1  RS4NT          RS4NT (NUC023) domain
    8.9e-07   28.5   0.2    2.1e-06   27.4   0.0    1.8  2  S4             S4 domain
    0.00011   22.0   0.7    0.00054   19.8   0.4    2.4  2  KOW            KOW motif


Domain annotation for each model (and alignments):
>> Ribosomal_S4e  Ribosomal family S4e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.5   0.7     9e-42   3.2e-38       1      75 []      95     169 ..      95     169 .. 0.99

  Alignments for each domain:
  == domain 1  score: 129.5 bits;  conditional E-value: 9e-42
                    TTEEEEEEE-TTSSEEEEEE-TTCCCEEEEEECEEEEECCCEEEEEETTS-EEEESSTT-STTEEEEEETTTTEE CS
  Ribosomal_S4e   1 tgenyrllydtkgrfalhkItseeakyKLcKikkkttvkkgipqlvthdGrtirypdpdikvnDtvkidleenkI 75 
                    tge++rl+yd+kgrf++h+It+eeakyKLcK+k+++++ kgip +vthdGrtirypdp+ikvnDt+k++le+nkI
     EPX72374.1  95 TGEHFRLVYDVKGRFTVHRITAEEAKYKLCKVKRVQLGAKGIPFIVTHDGRTIRYPDPLIKVNDTIKLNLETNKI 169
                    89************************************************************************9 PP

>> 40S_S4_C  40S ribosomal protein S4 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.0   0.1   7.1e-30   2.5e-26       1      46 [.     212     257 ..     212     259 .. 0.97

  Alignments for each domain:
  == domain 1  score: 91.0 bits;  conditional E-value: 7.1e-30
                 -SSS-EEEEEGGGEEE--STTS-SS---SS-S----HHHHHHHHHH CS
    40S_S4_C   1 DaaGntFATRlsNvFvIGkgnkpwvsLPkgkGiklsiaeerdkrla 46 
                 Da++++FATRlsNvFvIG+ nk+w+sLPkgkG+klsi+eerd+r+a
  EPX72374.1 212 DALDREFATRLSNVFVIGETNKSWISLPKGKGVKLSITEERDRRRA 257
                 9*******************************************98 PP

>> RS4NT  RS4NT (NUC023) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.5   8.2   2.1e-22   7.6e-19       1      37 []       3      39 ..       3      39 .. 0.98

  Alignments for each domain:
  == domain 1  score: 67.5 bits;  conditional E-value: 2.1e-22
                -S----EETTTS-TTS---SSSSSEE----SSSS-TT CS
       RS4NT  1 rGpkkHLKrlaAPkhWpldkkegvfavkPspGPHklr 37
                rGpkkHLKr+aAP+hW+ldk++g++a+kPs+GPHk+r
  EPX72374.1  3 RGPKKHLKRVAAPHHWLLDKLSGTYAPKPSAGPHKAR 39
                8**********************************87 PP

>> S4  S4 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   0.0   5.7e-10   2.1e-06       2      48 .]      43      90 ..      42      90 .. 0.95
   2 ?   -2.8   0.0       1.5   5.3e+03      31      48 .]     143     160 ..     140     160 .. 0.73

  Alignments for each domain:
  == domain 1  score: 27.4 bits;  conditional E-value: 5.7e-10
                EHHHHH.HHTTSSSSHHHHHHHHHTTTEEETTEEE--TT-EE-TTCEE CS
          S4  2 RLdkvl.arlglassrreArqlIehGrVlVNGkvvkdpsyrVkpgDvi 48
                +L ++l  rl++a   re+r + +++ ++V+Gkv++d  ++ +++Dvi
  EPX72374.1 43 PLIVFLrNRLKYALNGREVRAILMQRLIKVDGKVRTDNTFPTGFMDVI 90
                67889999*************************************998 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.5
                 TTEEE--TT-EE-TTCEE CS
          S4  31 NGkvvkdpsyrVkpgDvi 48 
                 +G+ ++ p   +k++D+i
  EPX72374.1 143 DGRTIRYPDPLIKVNDTI 160
                 788888787778888876 PP

>> KOW  KOW motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       1.8   6.5e+03       9      15 ..      33      39 ..      33      41 .. 0.76
   2 !   19.8   0.4   1.5e-07   0.00054       4      31 ..     180     210 ..     178     211 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.8
                SSTTTTC CS
         KOW  9 sGphkGk 15
                +Gphk +
  EPX72374.1 33 AGPHKAR 39
                69**966 PP

  == domain 2  score: 19.8 bits;  conditional E-value: 1.5e-07
                 EEEESSSTTTTCEEEEEEEETTT...TEEEE CS
         KOW   4 hVkVvsGphkGktGkVvkvdqhk...vrVfv 31 
                  V+V++G+++G++G++ +++ h    ++++v
  EPX72374.1 180 QVMVTGGRNMGRVGTIIHREHHLgsfEIIHV 210
                 6*****************9998766666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (262 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       442  (0.0246528); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1909.09
//
Query:       EPX72375.1  [L=336]
Description: CMGC/CDK/CDK7 protein kinase Mcs6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      1e-71  241.4   0.0    1.2e-71  241.2   0.0    1.0  1  Pkinase        Protein kinase domain
    1.3e-28  100.0   0.0    3.1e-28   98.8   0.0    1.5  2  Pkinase_Tyr    Protein tyrosine kinase
    1.6e-05   24.4   0.1    0.00011   21.6   0.0    1.9  2  Kinase-like    Kinase-like
      0.006   15.6   0.1      0.031   13.2   0.1    1.9  1  Haspin_kinase  Haspin like kinase domain
  ------ inclusion threshold ------
      0.037   13.9   0.1      0.062   13.2   0.1    1.3  1  APH            Phosphotransferase enzyme family
      0.057   12.5   0.1      0.096   11.7   0.1    1.3  1  Seadorna_VP7   Seadornavirus VP7


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  241.2   0.0     4e-75   1.2e-71       1     264 []      11     292 ..      11     292 .. 0.93

  Alignments for each domain:
  == domain 1  score: 241.2 bits;  conditional E-value: 4e-75
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS.--HH CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgs.lsee 98 
                 y+k++k+GeG++++V+ +++ket++ vA+Kkik+ + k+  + ++lrEik+lk+++h n+++l++vf +k++l ++le+++ + l+ l+++k + ++++
  EPX72375.1  11 YVKERKVGEGTYAVVFLGRQKETNRRVAIKKIKVGQFKDGIDLSALREIKFLKETRHVNVIELMDVFATKSNLNIILEFLDSD-LEMLIKDKFIvFQPA 108
                 7899*****************************************************************************66.******77777**** PP

                 HHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHH.TTSCBSHHHHHHHHHHHHHHHHHSS-S CS
     Pkinase  99 eakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelessskltsfvgtseYlAPEvl.keneyskkvDvWslGvilyelltgkpp 196
                 ++k ++  +l+gl+++Hs+ i+HrDlKp+N+Li+++g+lK++DFGl++ +   ++++++v+t++Y++PE+  + ++y++ vD+Ws+G+i++el+ ++p 
  EPX72375.1 109 HIKAWMLMLLRGLHHIHSRFILHRDLKPNNLLISSDGVLKLADFGLSRDYGMPNHMSHQVITRWYRPPELFmGCRSYGTGVDMWSVGCIFAELMLRTPY 207
                 **********************************************************************9899************************* PP

                 TTTSSHHHHHHHHHHTHHHHHHHCT.SHH...HHHTTS.......................-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 197 fsgekgkekvekeldqlekilkilg.etkeklpeasei.......................seeakdllkkllkkdpkkRltaeellqhpyl 264
                 ++   g++    +ldql  i++ lg ++   l++ +++                         e +dllkk +++dp +R+ta+++l+hpy+
  EPX72375.1 208 LP---GET----DLDQLSVIFRALGsPEPAVLQRMKQLpnyvdmkaipppsggmealfsaaGTEELDLLKKFFDYDPYSRPTAQQALEHPYF 292
                 **...544....88999999999996333333444444777788999************9988999*************************8 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.8   0.0     1e-31   3.1e-28       4     206 ..      14     207 ..      11     247 .. 0.91
   2 ?   -1.6   0.0      0.43   1.3e+03     235     256 ..     266     287 ..     250     289 .. 0.84

  Alignments for each domain:
  == domain 1  score: 98.8 bits;  conditional E-value: 1e-31
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHH.HHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTS CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkeeateee.keelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekekl 100
                  ++k+GeG+++ V+ g+ k    +++ +Va+K++k ++ ++    + l+e+k++k+++h n+++l+ v   +++l i++e++++ dL+  +++k    +
   EPX72375.1  14 ERKVGEGTYAVVFLGRQK----ETNRRVAIKKIKVGQFKDGiDLSALREIKFLKETRHVNVIELMDVFATKSNLNIILEFLDS-DLEMLIKDK-FIVF 105
                  789*************99....9999*******98777766478999*********************************986.999999999.99** PP

                  BHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS.-HHHHHHSE.EEHHHHHHHHHHHHH CS
  Pkinase_Tyr 101 tlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWm.apEslkekk.ftsksDvWsfGvllw 196
                  +  ++  ++l + +G+++++s+ ++Hrdl   N L+s++ v k++DfGL+rd      + ++ ++++  +W+ +pE ++ ++ + +  D+Ws G +  
   EPX72375.1 106 QPAHIKAWMLMLLRGLHHIHSRFILHRDLKPNNLLISSDGVLKLADFGLSRDY----GMPNHMSHQVITRWYrPPELFMGCRsYGTGVDMWSVGCIFA 199
                  ****************************************************9....56667778888899868999998777*************** PP

                  HHHTTSSGTT CS
  Pkinase_Tyr 197 Eiftlgespy 206
                  E++   ++py
   EPX72375.1 200 ELML--RTPY 207
                  **97..4554 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.43
                  HHHHHHHT-SSGGGS--HHHHH CS
  Pkinase_Tyr 235 yelmkkcweedpeeRptfselv 256
                   +l+kk +++dp +Rpt ++ +
   EPX72375.1 266 LDLLKKFFDYDPYSRPTAQQAL 287
                  589999**********998765 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0     0.079   2.4e+02      14      65 ..      11      62 ..       3      69 .. 0.84
   2 !   21.6   0.0   3.8e-08   0.00011     112     238 ..      69     196 ..      60     243 .. 0.74

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.079
  Kinase-like 14 lvrgellkkgdrsvvfevkdqetgeplavkvfllpseaskkdlerlkeqela 65
                 +v+   +++g   vvf+ + +et+  +a+k   + +     dl  l+e +++
   EPX72375.1 11 YVKERKVGEGTYAVVFLGRQKETNRRVAIKKIKVGQFKDGIDLSALREIKFL 62
                 6777888999999****************99999988888888888887765 PP

  == domain 2  score: 21.6 bits;  conditional E-value: 3.8e-08
  Kinase-like 112 nallllp..aasvdleilnkvlqkrset.......hkkletiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvl 200
                  n ++l+   a +++l+i+ + l++  e         ++ ++i ++ + l l+r   +++++ ++h +++++nll   +g l+l +f+  + +g    +
   EPX72375.1  69 NVIELMDvfATKSNLNIILEFLDSDLEMlikdkfiVFQPAHI-KAWM-LMLLRGLHHIHSRFILHRDLKPNNLLISSDGVLKLADFGLSRDYGMPNHM 164
                  555555433567788888887777777655432223333333.4444.45799999*******************************9999**99988 PP

  Kinase-like 201 seve..kgfaPpEllgsrggytrknktkmthkldaWqlGl 238
                  s+    + + PpEl+             +  ++d W +G 
   EPX72375.1 165 SHQVitRWYRPPELFMGCRS--------YGTGVDMWSVGC 196
                  55433499******987444........455888888885 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.1   1.1e-05     0.031     109     280 ..      18     185 ..       2     187 .. 0.58

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.1e-05
  Haspin_kinase 109 seklssevyqtke..kdkevvlKviplevledvtiskelslkelkslklvkgtypglllllqdkvlkekpdfyseqqlflvlllkdkGtdLeev.. 200
                    +e+ +  v+  ++  +++ v++K+i ++  +d      + l  l+++k +k t    ++ l d  +        + +l ++l++ d  +dLe +  
     EPX72375.1  18 GEGTYAVVFLGRQkeTNRRVAIKKIKVGQFKD-----GIDLSALREIKFLKETRHVNVIELMDVFAT-------KSNLNIILEFLD--SDLEMLik 99 
                    66666666655544466667777777765555.....344455555555555511122222222222.......235555555444..34444433 PP

  Haspin_kinase 201 .klkswkqa..lsifwqivkiLyvaEtkfeFEHRdLhldniLvdknlnvtlidlklsRle...ssegkvlytrld.dpllFqGggDy 280
                     k+  ++ a  +  +   +  L+   ++f + HRdL+ +n L+ + +   l d+ lsR     ++ ++ + tr    p+lF G + y
     EPX72375.1 100 dKFIVFQPAhiKAWMLMLLRGLHHIHSRFIL-HRDLKPNNLLISSDGVLKLADFGLSRDYgmpNHMSHQVITRWYrPPELFMGCRSY 185
                    3444444330033333455667777777765.**************************98888555555555554478888887666 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   2.1e-05     0.062     155     193 ..     116     152 ..      78     158 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.1e-05
                 HHHHH--SSS-EEEE-SS-SGGGEEEC..TTEEEEE--- CS
         APH 155 alaallpgelptvllHgDlhpgNllvdpddgrvtGviDf 193
                 +l++ l+   ++ +lH+Dl+p+Nll+   dg +  + Df
  EPX72375.1 116 MLLRGLHHIHSRFILHRDLKPNNLLIS-SDGVL-KLADF 152
                 444444446678899************.44544.45555 PP

>> Seadorna_VP7  Seadornavirus VP7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   3.2e-05     0.096     148     186 ..     115     151 ..     104     165 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 3.2e-05
  Seadorna_VP7 148 vaglkdLmdfhsestnllhGDcnpenlmcDknGylklvD 186
                   ++ l+ L+++h  s ++lh D +p+nl+  + G+lkl D
    EPX72375.1 115 LMLLRGLHHIH--SRFILHRDLKPNNLLISSDGVLKLAD 151
                   55577787777..89**********************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (336 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       449  (0.0250432); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2420.96
//
Query:       EPX72376.1  [L=596]
Description: hypothetical protein SOCG_00140 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
     3e-127  425.1  41.5   3.4e-127  424.9  41.5    1.0  1  AA_permease    Amino acid permease
      5e-39  134.3  43.1    6.1e-39  134.0  43.1    1.0  1  AA_permease_2  Amino acid permease


Domain annotation for each model (and alignments):
>> AA_permease  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  424.9  41.5  3.8e-131  3.4e-127       1     475 [.      65     523 ..      65     527 .. 0.97

  Alignments for each domain:
  == domain 1  score: 424.9 bits;  conditional E-value: 3.8e-131
  AA_permease   1 hvlvialggviGtglfvglgvvlsqaGplgallayllagvviflvmlslgeiatngpksggfytyasrflgpelGfviGlnylfswitvlaleltaas 98 
                  h+++ia+gg +Gtglfvg+g++l+ +Gp+++++a+ ++g+ +++++ +l+e+++++p+sg+fyty srf++p++Gf++G++y++s++++++lelt+a 
   EPX72376.1  65 HMQMIAIGGCVGTGLFVGSGNALADGGPASIIIAFTVIGLYVIFTTSALAELSVLYPVSGSFYTYFSRFIDPAWGFAVGIQYWLSFAVTVPLELTVAP 162
                  99************************************************************************************************ PP

  AA_permease  99 iliqfwelvtdlpkawvtgavflvvlliinlvgvkvygeaefilalikiiaiiafiivgiillaggkpnkga...gfrflgdngsifknnlppgfake 193
                   +i+ w   ++   a v+++vf+v++++in+ g k+yge+ef+l+++k++a+ +f++++ii+ agg p++ +   g+++++ +++     + +g    
   EPX72376.1 163 LIINVW---HAPGRASVWISVFYVLIIGINIWGTKGYGEVEFVLSIVKLVAVFGFLLLSIIITAGGVPTDTRgviGVSYWKPPLT-----FNNG---- 248
                  ******...6666678*********************************************************************.....****.... PP

  AA_permease 194 eegafknfisvfvivvfaftGielvaiiagEvkdPeksiPkailqvviritifYvlsllligllvprndlgllndsasa..aspfvifikesgvsvla 289
                      +k+f++v+vi++f+++G+elv+++a+E+kdP k+iPka++q+++ri++fYvl+l++++l++p n++ l ++  s   +spfvi+ik +++++l+
   EPX72376.1 249 ----IKGFCAVLVIAIFSLSGTELVGLAAAEAKDPHKTIPKAVRQIFWRIILFYVLALFMLTLVIPSNNPHLRTSGDSEalLSPFVIAIKLANIKALP 342
                  ....********************************************************************996666589***************** PP

  AA_permease 290 plinaviltaalssansslysasRvlyslakdglaPkvlkkvskrgvPlraillsmiisllalllaslnlaapivfnfllaisaliglivwlliilsy 387
                  +++navil+++ls++ns++y+asR+l++lak+g aPk+l k +krg P+ ai++++ ++ +a++ ++   +    f +ll+i +l++ ++w++i+ls+
   EPX72376.1 343 SVMNAVILSSTLSVGNSASYAASRALFALAKNGFAPKFLLKTNKRGHPIYAIIITLSLGSIAYFTEAGVGG--ALFGWLLSICGLSTTFIWGSICLSH 438
                  ***************************************************************88877777..9************************ PP

  AA_permease 388 lrfRkalkyqgrsieelgfkaallplgvilvlaaliiillilalyayltvkkgpkdwgaasfaaaylivllfliilvgvklhvknkrp 475
                  l fR+a+k+q++s+eel++ + ++++g+++++++  + l ++ ++a++++       +++sf++ayl ++l++i +v +kl +k+++ 
   EPX72376.1 439 LQFRRAWKAQNHSLEELPYLSMFGVYGSVYGVVMTFLALAAQLYVAIFPIDRA---PNPISFFQAYLAAPLLVISYVSWKLLKKTRIV 523
                  *************************************************5555...59*************************99876 PP

>> AA_permease_2  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.0  43.1   6.8e-43   6.1e-39       8     415 ..      68     497 ..      61     509 .. 0.82

  Alignments for each domain:
  == domain 1  score: 134.0 bits;  conditional E-value: 6.8e-43
  AA_permease_2   8 alvigsvigsgifvkn..laasggpalilwvwiavligslavllvyaElssalprsgGiyvytkaafgkkvaflsawfnwfayvpvlasilsvaas 101
                    +++ig ++g+g fv +  ++a ggpa+i++ +++++++++    ++aEls + p sg  y+y ++++ + ++f +++ +w+++++++++ l+va  
     EPX72376.1  68 MIAIGGCVGTGLFVGSgnALADGGPASIIIAFTVIGLYVIFTTSALAELSVLYPVSGSFYTYFSRFIDPAWGFAVGIQYWLSFAVTVPLELTVAPL 163
                    799***********99977777*****************************************************************999888766 PP

  AA_permease_2 102 yllnalgpdlqgntwltyliaiaililvalinirgikesakiqnilgilkillpliiliilglitvdgggfssl.....stetdt..ffpngwpgv 190
                     +   ++  +   +  + + ++++++l++ ini g+k+++ + ++l i+k++ ++ +l++  +it+ gg  ++      +  ++   +f+ng +g+
     EPX72376.1 164 IINV-WHAPG---R--ASVWISVFYVLIIGINIWGTKGYGEVEFVLSIVKLVAVFGFLLLSIIITA-GGVPTDTrgvigVSYWKPplTFNNGIKGF 252
                    5555.65322...2..33446899***************************866666665555555.555554456766555544778889***** PP

  AA_permease_2 191 llgllivlwsfdGfesaanvseevkk..kdvpkaifigllivlvlyllvniaflgvvpddei.....anlsnlgsvaalffeavggkvvaiivvil 279
                     ++l i+++s++G e +   + e+k   k++pka   ++  ++++y+l  + ++ v+p ++        ++ l+s++ +  + ++ k++ ++++++
     EPX72376.1 253 CAVLVIAIFSLSGTELVGLAAAEAKDphKTIPKAVRQIFWRIILFYVLALFMLTLVIPSNNPhlrtsGDSEALLSPFVIAIKLANIKALPSVMNAV 348
                    ***********************776669******************************99988865445669999******************** PP

  AA_permease_2 280 ialsllgaintavigssrvlealardgvlPrffakvnkfgspiraiiltaivslillllfllassaaynfllsvsslgliisyllliigalilrkk 375
                    i  s l  +n+a++++sr l+ala+ g+ P+f+ k+nk+g pi+aii+t+ + +i ++  +++ +a + +lls++ l+  ++++ + ++ l  r+ 
     EPX72376.1 349 ILSSTLSVGNSASYAASRALFALAKNGFAPKFLLKTNKRGHPIYAIIITLSLGSIAYFTEAGVGGALFGWLLSICGLSTTFIWGSICLSHLQFRRA 444
                    ********************************************************9999998899***********************9988766 PP

  AA_permease_2 376 rphlkr..........pgk..ilvaiigalfllfl.lvalffppkgpatqssl 415
                     + ++           +g    + + ++++++l + l++++fp +++ ++ s+
     EPX72376.1 445 WKAQNHsleelpylsmFGVygSVYGVVMTFLALAAqLYVAIFPIDRAPNPISF 497
                    55443333347444442222223333333333333236666777777665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (596 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       703  (0.0392102); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.32s 00:00:00.88 Elapsed: 00:00:00.44
# Mc/sec: 4033.73
//
Query:       EPX72377.1  [L=218]
Description: hypothetical protein SOCG_00141 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
        0.2   12.2   0.6       0.43   11.1   0.1    1.9  2  Ldl_recept_b  Low-density lipoprotein receptor repeat class B


Domain annotation for each model (and alignments):
>> Ldl_recept_b  Low-density lipoprotein receptor repeat class B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   2.4e-05      0.43       2      38 ..     134     164 ..     133     164 .. 0.93
   2 ?   -3.6   0.1      0.91   1.6e+04      15      23 ..     177     185 ..     175     187 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 2.4e-05
                   EEEEEETTTTEEEES-STTS---EEEE-SS-S-EEEE CS
  Ldl_recept_b   2 klYWtDwsldasisvadlnGshrktlfqedlqnPrgi 38 
                   k+Y+ D++      v d+nG +  +l++++++nP+++
    EPX72377.1 134 KIYFADSKKY----VVDMNGLD--NLINHAFNNPNDV 164
                   8999999999....*******9..***********85 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 0.91
                   ES-STTS-- CS
  Ldl_recept_b  15 svadlnGsh 23 
                   s++ lnGs+
    EPX72377.1 177 SSIFLNGSD 185
                   667789987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1323  (0.0737911); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 1517.93
//
Query:       EPX72378.1  [L=235]
Description: nuclease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-26   92.1   0.0    3.9e-26   91.6   0.0    1.2  1  SNase     Staphylococcal nuclease homologue
  ------ inclusion threshold ------
       0.31   11.1   1.0         35    4.5   0.1    3.1  3  DUF1560   Protein of unknown function (DUF1560)


Domain annotation for each model (and alignments):
>> SNase  Staphylococcal nuclease homologue
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.6   0.0   4.3e-30   3.9e-26       2     108 .]     108     221 ..     107     221 .. 0.96

  Alignments for each domain:
  == domain 1  score: 91.6 bits;  conditional E-value: 4.3e-30
                 EEETTEE-STSSBTTTTTSTTHHHHHHHHHHHHHHCSSEEEEE-SSBSTTSEEEEEEEET.......TEEHHHHHHHTTSSEE--.-BTT.STTTHHHH CS
       SNase   2 vrLvgidaPetakpkktvqpfgkeAkeflkklvlqkkvvvleldkkkDkygrllayvyln.......kknineeLvkeGlArvye.vyek.neekkkel 91 
                 vrL+g+daPe+ +++k++qpf  eAk++l+k +l+k+v+++ l+   D+y rl+a v +        k++i  ++v++GlA+vy         + k++l
  EPX72378.1 108 VRLAGVDAPESGHFGKKAQPFSLEAKQYLSKTLLHKNVRIIPLKV--DQYSRLVAGVQYYpishffwKRDIGPAMVQKGLAVVYDgTDGVfYPTSKEQL 204
                 9********************************************..***********999************************7777788899**** PP

                 HHHHHHHHHTT-GGGCT CS
       SNase  92 lkaeeeAkkkrkglWse 108
                 l++e++Akkk++ lWs+
  EPX72378.1 205 LSLEKKAKKKKLCLWSQ 221
                 ***************96 PP

>> DUF1560  Protein of unknown function (DUF1560)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.1    0.0039        35      17      30 ..      32      45 ..      29      50 .. 0.86
   2 ?    3.1   0.0     0.011        96      29      42 ..     103     116 ..      88     119 .. 0.85
   3 ?   -0.7   0.0      0.16   1.5e+03      22      32 ..     130     140 ..     127     150 .. 0.74

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.0039
     DUF1560 17 WeCrrfeakhPLsk 30
                W  rrfe  h + k
  EPX72378.1 32 WRFRRFETVHDIPK 45
                99********8877 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.011
     DUF1560  29 sknisvrsaeisvP 42 
                 sk isvr a +  P
  EPX72378.1 103 SKTISVRLAGVDAP 116
                 899****9988776 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.16
     DUF1560  22 feakhPLskni 32 
                 +eak  Lsk +
  EPX72378.1 130 LEAKQYLSKTL 140
                 58888888865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (235 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       386  (0.0215294); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 1611.05
//
Query:       EPX72379.1  [L=563]
Description: ENTH/VHS domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-66  224.2   0.3    2.2e-66  223.7   0.3    1.2  1  ANTH      ANTH domain
    4.1e-08   33.3   0.5    1.2e-07   31.8   0.1    1.9  2  ENTH      ENTH domain


Domain annotation for each model (and alignments):
>> ANTH  ANTH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  223.7   0.3   2.4e-70   2.2e-66       2     277 .]      10     270 ..       9     270 .. 0.96

  Alignments for each domain:
  == domain 1  score: 223.7 bits;  conditional E-value: 2.4e-70
                 HHHHHHHHT-SSS---HHHHHHHHHHHCST.TS-HHHHHHHHHHHCTSS.SHHHHHHHHHHHHHHHHHS-CHHHHHHHHTT-----TT---TSHHHSTH CS
        ANTH   2 levavvKAtshdevPpkekhvreilvltss.rekvaalvwalsrrlkltrnwvvalKaLilvHklLreGhpsveqellsarrrisellnlssfddsssk 99 
                 +++av+KAt+++ ++pk khv+ il +ts+ + ++ +++++l++r+k++ +w+v++K+Li++H +L++G+p ++  +ls+r ri e+ + ss       
  EPX72379.1  10 YDRAVKKATKIKLAAPKSKHVELILQATSEdPDTLDTVIQNLCERMKDS-SWTVVYKSLIVFHLMLKDGSPGTTIVALSQRPRILEVVRASS------- 100
                 789**********************************************.******************************************....... PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHSS-...CCCS--S.....TTSHCC.C--HHHHHHHHHHHHHHHHHHHTT---GGG--SHHHHHHHHHHHHHHHH CS
        ANTH 100 swdysafiraYakyLderlefhrklkvdkgelereeegslvavedpnerktlsmeklldkieklqklldrllkckptgnalsnevilaalvllvkeslk 198
                    ++++i +Y+++L+er++ + +l +d   +++  +      ++++ ++ +  + l ++i+ +q++l+rll+c++ +++ +n++++++++llv ++l 
  EPX72379.1 101 LTTQGQNIYNYSRFLSERVRQYGRLGFD---YAQAGDA-----TKKKLKQLTVEKGLIRHIDGIQSQLKRLLRCQFLVDEIDNDITVTSFRLLVGDLLV 191
                 6899************************...7777777.....344444477888999***************************************** PP

                 HHHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT--GGG.S--GGGS-CHHCCCCCHHHHC CS
        ANTH 199 lYkaineglinLlekffelskheadkaldiykrfskqfeelkeFyevckslgilrsleiPelekippnllealeeflrd 277
                 l+kain g+i+Lle++fe+s+++a++ l+iyk+f++q+e++ +F+ +++sl++ +++ +P+++++p +l+++lee+l+d
  EPX72379.1 192 LFKAINIGVIKLLEHYFEMSHTDAEQSLRIYKTFVRQTEDVINFLGTARSLEFVTKFPVPNIKHAPISLTASLEEYLHD 270
                 ****************************************************************************986 PP

>> ENTH  ENTH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.8   0.1   1.4e-11   1.2e-07       2      85 ..       8      90 ..       7     122 .. 0.84
   2 ?   -1.1   0.0       0.2   1.8e+03      24      63 ..     160     225 ..     134     249 .. 0.58

  Alignments for each domain:
  == domain 1  score: 31.8 bits;  conditional E-value: 1.4e-11
                -HHHHHHHHHTSSSSSS--HHHHHHHHHHTTSH.HHHHHHHHHHHHHHHH--GGGHHHHHHHHHHHHHHHHHS-H.HHHHHHHHTH CS
        ENTH  2 seteskvreatnndpwGpsnkllteiarltysk.kelseiisvitkrLqnnkgkewrsvlKaLtlieYLlknGse.qvidwlkeni 85
                +++   v++at+ +   p++k+ + i ++t +   +l  +i+ + +r+   k+++w +v+K+L++ + +lk Gs    i  l+++ 
  EPX72379.1  8 TSYDRAVKKATKIKLAAPKSKHVELILQATSEDpDTLDTVIQNLCERM---KDSSWTVVYKSLIVFHLMLKDGSPgTTIVALSQRP 90
                688999************************9988**************...99*********************843444445554 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.2
                 HHHHHHHTTSHHHHHHHHHHHHHHH..........................HH--GGGHHHHHHHH CS
        ENTH  24 lteiarltyskkelseiisvitkrL..........................qnnkgkewrsvlKaL 63 
                 l+ + r+++   e+ + i v+  rL                          + ++ ++ ++++K+ 
  EPX72379.1 160 LKRLLRCQFLVDEIDNDITVTSFRLlvgdllvlfkainigvikllehyfemSHTDAEQSLRIYKTF 225
                 333333333333333333333333366666666666666666666666665667777777777764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (563 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       565  (0.0315132); expected 358.6 (0.02)
Passed bias filter:                      369  (0.0205812); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.31s 00:00:00.89 Elapsed: 00:00:00.48
# Mc/sec: 3521.34
//
Query:       EPX72380.1  [L=415]
Description: septin Spn7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-79  267.5   0.3    1.7e-79  267.1   0.3    1.2  1  Septin    Septin


Domain annotation for each model (and alignments):
>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  267.1   0.3   9.2e-84   1.7e-79       1     277 [.      11     289 ..      11     293 .. 0.96

  Alignments for each domain:
  == domain 1  score: 267.1 bits;  conditional E-value: 9.2e-84
                 XEEEEEEEEEEBTTSSCCCCCCTTSSSS------------.------S-EEEEEEEEETTCEEEEEEEE---BSSSSSHHCCCHHHHHHHHHHHHHHHH CS
      Septin   1 kgieftlmvvGesglGkttlintlfetdlieeekleease.kkkktveikkkkvvieedgvklnltviDtpgfGdavdnskswepiveyideqfeeylr 98 
                 kg +f lmv G+s +G  + in l+e+++ +e+   +++e + ++ ++i ++++ i+++++++ lt+i+  gfGd +d s++++++ +y+++q++++l 
  EPX72380.1  11 KGQKFRLMVTGSSCTGYQSCINVLCEKQILDEQLDVNPEEaHLERPLKIIEHEADIQGEEFRVALTIIEVCGFGDMLDRSSNFDVVTDYLENQLDQVLV 109
                 6899****************************9888888878999****************************************************** PP

                 HCTSS--.SS-----EEEEEEEE-TTSSSS-HHHHHHHHHHTTTS-EEEEESSGGGS-HHHHHHHHHHHHHHHHHTT--------SSSS-SCCHHHHHH CS
      Septin  99 eesklkR.kkivDkRvHaclyfisPtghglkpldvelmkklsekvnliPviaKaDtltkeElkefKkkireeleeeeikiyklpdeeededeeakelse 196
                 eesk++R +k+vDkRv a+lyfi+P gh l ++d+e+m++ s++vn+iPvi+ a+++tkeEl+ fK++i +el+ e+i+i+++p  e+++++e++e+++
  EPX72380.1 110 EESKIRRnSKFVDKRVDALLYFIEPYGHCLSEFDLEAMRRFSKRVNVIPVIGFANAFTKEELSIFKQRIVQELSDENIQIFDFPYDEDEDEDEVVEENK 208
                 *******999************************************************************************7766666667889**** PP

                 HHHHC-SEEB-SSSSEEEESSSEEEEEEETTEEEETT-TTT-SCCHHHHHHHHHCHHHHHHHHHHTHHHHHHHHHH-XXXX CS
      Septin 197 klkeslPfaivgsneliekkgkkvrgRkypWGvvevenekhsdFlkLrklllkthledLkevteellYetyRseklsklke 277
                 +l+++lPfa+ g+ + ++++     ++++pWG+ ++e++ hsdF+ L+++l+ +hl+ Lk +t++ +Ye yR+e+ls+ + 
  EPX72380.1 209 RLRSNLPFAVSGAATGVNQQDFDDLAKHFPWGTYNIEDPAHSDFVDLKTVLFMSHLQHLKFITQQYFYEAYRTERLSNASL 289
                 *******************999999***************************************************99775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (415 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1177  (0.0656478); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.47
# Mc/sec: 2665.32
//
Query:       EPX72381.1  [L=1057]
Description: STE/STE11/CDC15 protein kinase Cdc7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.4e-74  249.2   0.0    1.5e-73  247.5   0.0    1.9  2  Pkinase         Protein kinase domain
    4.6e-50  170.3   0.0    8.4e-50  169.5   0.0    1.4  1  Pkinase_Tyr     Protein tyrosine kinase
     0.0002   20.3   1.0    0.00029   19.7   0.0    1.7  2  Pkinase_fungal  Fungal protein kinase
      0.009   16.0   0.9         39    4.5   0.0    4.6  4  Arm             Armadillo/beta-catenin-like repeat
  ------ inclusion threshold ------
      0.013   15.6   0.0      0.086   13.0   0.0    2.3  2  ABC1            ABC1 family
       0.03   13.6   0.0      0.064   12.6   0.0    1.5  1  Kinase-like     Kinase-like
      0.069   12.8   0.0       0.13   11.8   0.0    1.5  1  FTA2            Kinetochore Sim4 complex subunit FTA2
        7.5    7.2   9.1        2.3    8.9   1.4    2.9  3  NAM-associated  No apical meristem-associated C-terminal doma


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  247.5   0.0   6.6e-77   1.5e-73       5     264 .]      14     260 ..      10     260 .. 0.95
   2 ?   -2.4   0.1       1.1   2.4e+03     229     255 ..     503     537 ..     469     544 .. 0.60

  Alignments for each domain:
  == domain 1  score: 247.5 bits;  conditional E-value: 6.6e-77
                 EEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHHHHHH CS
     Pkinase   5 eklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseeeakki 103
                   lG+G+fG Vy++++ ++g++vAvK+ik++k+ k++ + + +Ei +lk+l+hpniv++ ++++ +d+l++vley+e+g+l+++ ++ g+++e+ +  +
  EPX72381.1  14 DCLGKGAFGAVYRGLNIKNGETVAVKRIKVSKIMKMDLSVIKMEIDLLKNLDHPNIVKYRGSYQFDDSLCIVLEYCENGSLHSICKNFGKIPENLVAIY 112
                 569************************************************************************************************ PP

                 HHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSH CS
     Pkinase 104 akqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelessskltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgkppfsgekg 202
                 ++q+l+gl+ylH++g+iHrD+K +NiL  ++g +K++DFG+a++++     +s+vg+++++APEv++  + ++++D+Ws+G++++ell g+pp+++ + 
  EPX72381.1 113 TYQVLQGLHYLHNQGVIHRDIKGANILTTKDGTIKLADFGVATKMNALD-EHSVVGSPYWMAPEVIELIGATTSSDIWSVGCTVIELLEGTPPYYDLDP 210
                 ***********************************************88.9********************************************4444 PP

                 HHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 203 kekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 +           ++++++  ++e+ p +s+is +ak++l ++++kdp+ R++ ++ll+h+++
  EPX72381.1 211 TA----------ALFHMV--KDEHPPFPSNISLSAKNFLAQCFQKDPNLRIGTKKLLKHQWV 260
                 43..........333333..35899************************************6 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.1
                 HHTTS........-HHHHHHHHHHT-SSGCCSTTH CS
     Pkinase 229 easei........seeakdllkkllkkdpkkRlta 255
                  +++i         + +k++lk l++k+ ++R + 
  EPX72381.1 503 MENNIlldkrvrlISYLKEILKGLIEKKLEERSSL 537
                 33333444444447788899999999999999883 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  169.5   0.0   3.8e-53   8.4e-50       2     256 ..      11     255 ..      10     257 .. 0.93

  Alignments for each domain:
  == domain 1  score: 169.5 bits;  conditional E-value: 3.8e-53
                  EEEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHH.HHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTT CS
  Pkinase_Tyr   2 elgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateee.keelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkeke 98 
                  +lg+ lG+GafG V++g       k+ ++VavK +k ++  +   + +  e++++k+l+hpnivk+ g +  +++l+iv+ey+++G+L++  ++    
   EPX72381.1  11 TLGDCLGKGAFGAVYRGLNI----KNGETVAVKRIKVSKIMKMdLSVIKMEIDLLKNLDHPNIVKYRGSYQFDDSLCIVLEYCENGSLHSICKNF--G 102
                  68899************999....8999*******976655551555556****************************************99887..9 PP

                  TSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHHH CS
  Pkinase_Tyr  99 kltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfGvllw 196
                  k+  + +  +++qv +G++yL+++ ++Hrd+   N+L +++ ++k++DfG+a ++    +  ++++   +  WmapE+++    t++sD+Ws G +++
   EPX72381.1 103 KIPENLVAIYTYQVLQGLHYLHNQGVIHRDIKGANILTTKDGTIKLADFGVATKM----NALDEHSVVGSPYWMAPEVIELIGATTSSDIWSVGCTVI 196
                  99999999**********************************************9....6777778888999************************** PP

                  HHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHH CS
  Pkinase_Tyr 197 EiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfselv 256
                  E+++ g  py +l+++ +l ++ ++++ + p++++ + ++++ +c+++dp+ R   ++l+
   EPX72381.1 197 ELLE-GTPPYYDLDPTAALFHMVKDEHPPFPSNISLSAKNFLAQCFQKDPNLRIGTKKLL 255
                  ***9.*********99999999999****************************9888776 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   1.3e-07   0.00029     314     389 ..     115     180 ..      99     191 .. 0.84
   2 ?   -2.5   0.5      0.74   1.7e+03     247     270 ..     349     382 ..     251     424 .. 0.52

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 1.3e-07
  Pkinase_fungal 314 DaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlkge 389
                     ++++g+  L+ ++g++HrDi   Nil t     ++ +  L+D+ +a++++  +++s+    +G +++ma ev++ +
      EPX72381.1 115 QVLQGLHYLH-NQGVIHRDIKGANILTT-----KDGTIKLADFGVATKMNALDEHSV----VGSPYWMAPEVIELI 180
                     6889999***.****************9.....78999************8766665....9*******9999855 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.74
  Pkinase_fungal 247 e..........lsskaevklkksesskkvekrsv 270
                     +           s+++++++++s+ sk+ ++ sv
      EPX72381.1 349 SehflnfykdfKSKNTSSSSTNSSPSKSKKSISV 382
                     1233332222212222222222222222222222 PP

>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.1     0.082   1.8e+02       5      29 ..     552     577 ..     549     578 .. 0.88
   2 ?   -0.4   0.1      0.61   1.4e+03      14      33 ..     719     740 ..     718     741 .. 0.81
   3 ?    4.5   0.0     0.018        39      22      41 .]     795     819 ..     782     819 .. 0.76
   4 ?    2.9   0.0     0.053   1.2e+02       4      23 ..     865     884 ..     862     896 .. 0.82

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.082
                 HHHHHHTTHHHHHHHHTT.TSSHHHH CS
         Arm   5 kdavieaGavppLvrLLs.sedeevq 29 
                 kd++++a ++ pL++ Ls  ed ++q
  EPX72381.1 552 KDELVKAHGMLPLIETLSeVEDMSLQ 577
                 899**************988777766 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.61
                 HHHHHHHTT..TSSHHHHHHHH CS
         Arm  14 vppLvrLLs..sedeevqeeAa 33 
                 + ++++ L   s++e++++eA+
  EPX72381.1 719 LSRFCEILLalSQSETYVKEAL 740
                 66677777779*********97 PP

  == domain 3  score: 4.5 bits;  conditional E-value: 0.018
                 T.....TSSHHHHHHHHHHHHHHTT CS
         Arm  22 s.....sedeevqeeAawALsNLaa 41 
                       +   e++ e++++L N+++
  EPX72381.1 795 GdpklkDNRKEIRNESLATLFNICR 819
                 4555558999**************7 PP

  == domain 4  score: 2.9 bits;  conditional E-value: 0.053
                 HHHHHHHTTHHHHHHHHTTT CS
         Arm   4 nkdavieaGavppLvrLLss 23 
                 +++++++  +++ +++LL++
  EPX72381.1 865 CRQYLWKNRGLEFFLSLLQD 884
                 89****************94 PP

>> ABC1  ABC1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   3.8e-05     0.086      20      72 ..      17      68 ..      13     108 .. 0.79
   2 ?   -1.8   0.1       1.5   3.3e+03      55     101 ..     513     559 ..     503     572 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 3.8e-05
        ABC1 20 AaASiaqVhrA.klksgeeVavKvqrpgvkkriksDlellkllakllkkflkel 72
                + + ++ V+r+ ++k+ge+VavK  r +v+k +k Dl+++k+ ++llk++ +  
  EPX72381.1 17 GKGAFGAVYRGlNIKNGETVAVK--RIKVSKIMKMDLSVIKMEIDLLKNLDHPN 68
                5677899***944569*****99..668**************999998876554 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 1.5
        ABC1  55 lellkllakllkkflkelrldleelvdefskslleEldferEAknae 101
                 ++l+++l ++lk ++++  ++   lv ++++ l e++ ++ E  +a+
  EPX72381.1 513 VRLISYLKEILKGLIEKKLEERSSLVTQIASILSEDISLKDELVKAH 559
                 56778888888888887778999999999999999999999866665 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   2.9e-05     0.064     148     196 ..     111     159 ..     100     203 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 2.9e-05
  Kinase-like 148 llTlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragt 196
                  + T q+++   +L+++g++h +++  n+l  ++g ++l +f+   +  +
   EPX72381.1 111 IYTYQVLQGLHYLHNQGVIHRDIKGANILTTKDGTIKLADFGVATKMNA 159
                  56889999999******************************87666555 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0     6e-05      0.13     156     212 ..      93     152 ..      51     155 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 6e-05
        FTA2 156 piraIVKelellkeqeelevsqlpkllrdlkklhklgIvvrDlkeenyidg.....kLvDls 212
                  +  I K+  + k +e+l   ++ ++l+ l+ lh++g+++rD+k  n++       kL D++
  EPX72381.1  93 SLHSICKN--FGKIPENLVAIYTYQVLQGLHYLHNQGVIHRDIKGANILTTkdgtiKLADFG 152
                 34456666..8899999*****************************9985512233466666 PP

>> NAM-associated  No apical meristem-associated C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.1      0.13     3e+02     125     152 ..      27      54 ..      23      57 .. 0.88
   2 ?   -1.7   0.1       1.9   4.2e+03     105     159 ..     263     311 ..     249     312 .. 0.58
   3 ?    8.9   1.4     0.001       2.3      11      50 ..     345     384 ..     343     462 .. 0.81

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.13
  NAM-associated 125 kldieeekveaeqrqaeeeImskDlsgl 152
                      l+i++ ++ a +r++ ++Im++Dls +
      EPX72381.1  27 GLNIKNGETVAVKRIKVSKIMKMDLSVI 54 
                     578999999999*************965 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.9
  NAM-associated 105 qkkiakkskekkeeaeleekkldieeekveaeqrqaeeeImskDlsglddkqkeY 159
                     ++++ k + + +    + +k ++  +e  + +++++e  + +++++  +dkq +Y
      EPX72381.1 263 HQASTKFTDAID----EVQKYNERVNE--DNMNFINETTVHNINPTLHSDKQSSY 311
                     444333333333....22333333333..44788889999999999999988777 PP

  == domain 3  score: 8.9 bits;  conditional E-value: 0.001
  NAM-associated  11 lLknepKWkdqydelkkkrkpkssassspatsssestdee 50 
                     +Lk+++ + + y+++k k+  +ss++ssp++s+++ + ++
      EPX72381.1 345 VLKKSEHFLNFYKDFKSKNTSSSSTNSSPSKSKKSISVDQ 384
                     8***************999999999999998888555533 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1057 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1023  (0.0570584); expected 358.6 (0.02)
Passed bias filter:                      601  (0.0335211); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.79u 0.32s 00:00:01.11 Elapsed: 00:00:00.46
# Mc/sec: 6866.14
//
Query:       EPX72382.1  [L=198]
Description: mediator complex subunit Med8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.4e-17   62.2   6.5    7.4e-17   61.7   6.5    1.2  1  Med8      Mediator of RNA polymerase II transcription complex


Domain annotation for each model (and alignments):
>> Med8  Mediator of RNA polymerase II transcription complex subunit 8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.7   6.5   4.1e-21   7.4e-17       4     141 ..       6     161 ..       1     191 [. 0.84

  Alignments for each domain:
  == domain 1  score: 61.7 bits;  conditional E-value: 4.1e-21
        Med8   4 eekqLeasLealrqRladLksslaslinkleqedellsWpslldqaallSnnLttlsklLksektplLrnlvvlPlllsperdeeLakltegRvpvfsH 102
                 +e  +e+ Le +rqR  ++ +sl+ ++  l+q+++l  Wp++++++++l +++ +ls+ L + + ++Lr++ ++P+ ++p r++e              
  EPX72382.1   6 SERAVES-LEGIRQRTTQIVHSLSHFLAILHQTEQLAPWPTIHKNFNILLSQIHSLSNTL-AIHFQSLRTTNIFPSEEFPVREQE-------------- 88 
                 6778888.****************************************************.************************.............. PP

        Med8 103 evvpdlLRtKldPevE..................................ekeaqleakarnlggeatlekqe 141
                  ++++lLRt++ P vE                                     + +e ++ n++g +t+++  
  EPX72382.1  89 PLLTTLLRTRPLPVVEewesatleeyendpslksksqkkplpqdvlweeaRDLLMQERERYNWTGYVTRQEEL 161
                 ****************999999999999999999999999998888888755555555666666666644433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       765  (0.0426683); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.44
# Mc/sec: 1338.78
//
Query:       EPX72383.1  [L=567]
Description: Ras1-Scd pathway protein Ral2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-17   62.4   4.3    2.7e-06   27.4   0.0    4.7  4  Kelch_6   Kelch motif
    2.4e-15   56.4   2.7    1.1e-07   32.0   0.1    4.7  4  Kelch_3   Galactose oxidase, central domain
    1.1e-14   54.1   0.2    3.2e-06   27.1   0.0    3.0  2  Kelch_4   Galactose oxidase, central domain
    7.1e-12   45.0   7.5     0.0003   20.7   0.0    4.5  4  Kelch_5   Kelch motif
    1.2e-10   40.9   4.7      0.007   16.3   0.1    4.6  4  Kelch_2   Kelch motif
      2e-10   40.1   2.5     0.0011   18.5   0.1    3.6  3  Kelch_1   Kelch motif


Domain annotation for each model (and alignments):
>> Kelch_6  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   0.0   9.1e-10   2.7e-06       6      44 ..      36      75 ..      36      83 .. 0.94
   2 !   21.1   0.0   9.4e-08   0.00028       1      45 [.      84     133 ..      84     137 .. 0.93
   3 !    9.5   0.1   0.00043       1.3       1      45 [.     153     197 ..     153     202 .. 0.92
   4 ?    2.1   0.1     0.091   2.7e+02      14      43 ..     324     348 ..     315     352 .. 0.82

  Alignments for each domain:
  == domain 1  score: 27.4 bits;  conditional E-value: 9.1e-10
     Kelch_6  6 slvsvggkiYifGGytds.spylnkvwvydpetksWeqlp 44
                s+v vg++ Y+fGG+++  + ++n++++ d+et+sW+ ++
  EPX72383.1 36 SVVQVGNHAYLFGGRDAEdGIPVNDLYFVDLETGSWKLVE 75
                7899************99******************9986 PP

  == domain 2  score: 21.1 bits;  conditional E-value: 9.4e-08
     Kelch_6   1 praghslvsvggkiYifGGytds.....spylnkvwvydpetksWeqlpp 45 
                 pr++hs v +++ ++ fGG + +        l++ +++++etk+W+ +p+
  EPX72383.1  84 PRYFHSGVYWNENLVFFGGIGLDeennsLCGLSSTEIFNLETKTWRVVPS 133
                 799***********************996668999*************97 PP

  == domain 3  score: 9.5 bits;  conditional E-value: 0.00043
     Kelch_6   1 praghslvsvggkiYifGGytdsspylnkvwvydpetksWeqlpp 45 
                 pr+gh  ++ g++  +++G++ s++y  ++  +d++  +W + +p
  EPX72383.1 153 PRYGHLYCVLGDYMIVYCGQDLSNNYIEQINAFDLKREKWVHSSP 197
                 69999***********************************98655 PP

  == domain 4  score: 2.1 bits;  conditional E-value: 0.091
     Kelch_6  14 iYifGGytdsspylnkvwvydpetksWeql 43 
                 iY+ + + +       +wvy+++  +W ql
  EPX72383.1 324 IYLTSSRQA-----FVLWVYSLDRENWIQL 348
                 777777777.....689**********887 PP

>> Kelch_3  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.0   0.1   3.6e-11   1.1e-07       1      48 [.      41      92 ..      41      92 .. 0.91
   2 !   12.2   0.0   5.8e-05      0.17       3      44 ..      96     157 ..      94     162 .. 0.74
   3 ?    1.7   0.0      0.12   3.4e+02       1      16 [.     163     177 ..     163     208 .. 0.66
   4 !    6.9   0.1    0.0026       7.9      21      37 ..     335     351 ..     332     359 .. 0.90

  Alignments for each domain:
  == domain 1  score: 32.0 bits;  conditional E-value: 3.6e-11
     Kelch_3  1 gdrlyifGGlgddgqdrlndvyvydldtntWaei...asl.ppaRaghaata 48
                g+ +y+fGG+++  + ++nd+y +dl+t++W+ +   +sl p++R++h++++
  EPX72383.1 41 GNHAYLFGGRDAEDGIPVNDLYFVDLETGSWKLVenqGSLkPTPRYFHSGVY 92
                688********988******************99888887688******985 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 5.8e-05
     Kelch_3   3 rlyifGGlgddgqdrl....ndvyvydldtntWa....ei...........aslpp.aRagh 44 
                  l++fGG g d ++++    +++  ++l+t tW+    e+           ++++p +R+gh
  EPX72383.1  96 NLVFFGGIGLDEENNSlcglSSTEIFNLETKTWRvvpsETnesenmedaeaSTCQPlPRYGH 157
                 499*******7766666999**************6666225556666666455544599999 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.12
     Kelch_3   1 gdrlyifGGlgddgqd 16 
                 gd++ ++ G +  +++
  EPX72383.1 163 GDYMIVYCGQDL-SNN 177
                 688888888885.233 PP

  == domain 4  score: 6.9 bits;  conditional E-value: 0.0026
     Kelch_3  21 vyvydldtntWaeiasl 37 
                 ++vy+ld+++W ++++l
  EPX72383.1 335 LWVYSLDRENWIQLDTL 351
                 7**********999876 PP

>> Kelch_4  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.0   1.1e-08   3.4e-05       7      46 ..      37      79 ..      35      83 .. 0.84
   2 !   27.1   0.0   1.1e-09   3.2e-06       1      46 [.      84     133 ..      84     138 .. 0.91

  Alignments for each domain:
  == domain 1  score: 23.8 bits;  conditional E-value: 1.1e-08
     Kelch_4  7 atsipdgtiylfGGrgedg.tllndlylldlstntWrrl...gs 46
                +++++ +  ylfGGr +++  ++ndly+ dl+t++W+ +   gs
  EPX72383.1 37 VVQVG-NHAYLFGGRDAEDgIPVNDLYFVDLETGSWKLVenqGS 79
                67785.899*******9955****************99955555 PP

  == domain 2  score: 27.1 bits;  conditional E-value: 1.1e-09
     Kelch_4   1 pRaghsatsipdgtiylfGGrgedg.....tllndlylldlstntWrrlgs 46 
                 pR +hs ++++  +++ fGG+g d        l+ + +++l+t+tWr ++s
  EPX72383.1  84 PRYFHSGVYWNE-NLVFFGGIGLDEennslCGLSSTEIFNLETKTWRVVPS 133
                 8*********65.6666******999**9999***************9965 PP

>> Kelch_5  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   2.9e-06    0.0087      10      41 ..      37      68 ..      28      69 .. 0.84
   2 !   20.7   0.0   9.9e-08    0.0003       2      30 ..      82     112 ..      82     125 .. 0.87
   3 !    9.3   0.3   0.00038       1.1       2      25 ..     151     174 ..     151     179 .. 0.88
   4 ?   -1.2   0.2       0.7   2.1e+03       4      14 ..     197     207 ..     196     210 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 2.9e-06
     Kelch_5 10 avtvsekiYvyGGkvgrdgsvsddvyvLdlps 41
                +v v++  Y++GG++++dg++ +d+y  dl++
  EPX72383.1 37 VVQVGNHAYLFGGRDAEDGIPVNDLYFVDLET 68
                4447899*******************878876 PP

  == domain 2  score: 20.7 bits;  conditional E-value: 9.9e-08
     Kelch_5   2 PppRaghcavtvsekiYvyGGkvg..rdgsv 30 
                 P+pR+ h+ v+++e++ ++GG++   +++s+
  EPX72383.1  82 PTPRYFHSGVYWNENLVFFGGIGLdeENNSL 112
                 99*********************97655555 PP

  == domain 3  score: 9.3 bits;  conditional E-value: 0.00038
     Kelch_5   2 PppRaghcavtvsekiYvyGGkvg 25 
                 P pR+gh +++++++++vy G + 
  EPX72383.1 151 PLPRYGHLYCVLGDYMIVYCGQDL 174
                 99*****************99886 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 0.7
     Kelch_5   4 pRaghcavtvs 14 
                 p+a+hc v+ s
  EPX72383.1 197 PFAYHCGVYRS 207
                 899****9876 PP

>> Kelch_2  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4   0.0    0.0032       9.7      12      46 ..      42      75 ..      34      78 .. 0.83
   2 !   16.3   0.1   2.4e-06     0.007       1      46 [.      84     132 ..      84     134 .. 0.93
   3 !   16.1   0.1   2.6e-06    0.0079       1      42 [.     153     192 ..     153     196 .. 0.97
   4 ?   -0.2   0.0      0.38   1.1e+03      20      43 ..     318     346 ..     311     352 .. 0.64

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0032
     Kelch_2 12 gkiyvvGGahtdnpnlsssdvhvldlekhvWeevt 46
                +  y++GG+ + +++   +d+++ dle+ +W++v 
  EPX72383.1 42 NHAYLFGGR-DAEDGIPVNDLYFVDLETGSWKLVE 75
                556999999.888888899*************986 PP

  == domain 2  score: 16.3 bits;  conditional E-value: 2.4e-06
     Kelch_2   1 rrgghsssvpggkiyvvGGa...htdnpnlsssdvhvldlekhvWeevt 46 
                 +r+ hs ++++  ++++GG+   ++ n+++  s+  +++le+++W+ v+
  EPX72383.1  84 PRYFHSGVYWNENLVFFGGIgldEENNSLCGLSSTEIFNLETKTWRVVP 132
                 57778899*************************************9887 PP

  == domain 3  score: 16.1 bits;  conditional E-value: 2.6e-06
     Kelch_2   1 rrgghsssvpggkiyvvGGahtdnpnlsssdvhvldlekhvW 42 
                 +r+gh ++v+g+ ++v++G   d++n +++ ++ +dl+ ++W
  EPX72383.1 153 PRYGHLYCVLGDYMIVYCGQ--DLSNNYIEQINAFDLKREKW 192
                 7*******************..******************** PP

  == domain 4  score: -0.2 bits;  conditional E-value: 0.38
     Kelch_2  20 a.....htdnpnlsssdvhvldlekhvWe 43 
                        +  +++  + ++v+ l+ + W 
  EPX72383.1 318 NlilsgIYLTSSRQAFVLWVYSLDRENWI 346
                 43333334666666678999999999996 PP

>> Kelch_1  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.1   4.9e-06     0.015       6      42 ..      36      74 ..      36      77 .. 0.94
   2 !   18.5   0.1   3.6e-07    0.0011       1      44 [.      84     133 ..      84     133 .. 0.87
   3 !    4.7   0.0    0.0074        22       1      40 [.     153     193 ..     153     198 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 4.9e-06
                EEEEETTEEEEEEEBCS..SSBEEEEEEEETTTTEEEEE CS
     Kelch_1  6 gavvvggkiYviGGsdg..gnalssvevyDpetntWrel 42
                ++v vg++ Y +GG+d   g ++++++  D+et++W  +
  EPX72383.1 36 SVVQVGNHAYLFGGRDAedGIPVNDLYFVDLETGSWKLV 74
                699*********************************866 PP

  == domain 2  score: 18.5 bits;  conditional E-value: 3.6e-07
                 BBBSEEEEEETTEEEEEEEBCS......SSBEEEEEEEETTTTEEEEECC CS
     Kelch_1   1 aragagavvvggkiYviGGsdg......gnalssvevyDpetntWrelps 44 
                 +r+ ++ v+ ++ +  +GG          + lss e++++et+tWr +ps
  EPX72383.1  84 PRYFHSGVYWNENLVFFGGIGLdeennsLCGLSSTEIFNLETKTWRVVPS 133
                 678888888888888888888888999999*******************8 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.0074
                 BBBSEEEEEETTEEEEEEEBCS.SSBEEEEEEEETTTTEEE CS
     Kelch_1   1 aragagavvvggkiYviGGsdg.gnalssvevyDpetntWr 40 
                 +r+g+  +v+g+++ v  G+d  +n+   + ++D++  +W 
  EPX72383.1 153 PRYGHLYCVLGDYMIVYCGQDLsNNYIEQINAFDLKREKWV 193
                 79*******************99999999999999999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (567 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       386  (0.0215294); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 3998.24
//
Query:       EPX72384.1  [L=508]
Description: TLDc domain-containing protein 2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-23   82.9   0.6    1.1e-21   77.4   0.6    2.3  1  TLD       TLD


Domain annotation for each model (and alignments):
>> TLD  TLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.4   0.6   6.4e-26   1.1e-21       4     138 ..     299     494 ..     296     495 .. 0.74

  Alignments for each domain:
  == domain 1  score: 77.4 bits;  conditional E-value: 6.4e-26
         TLD   4 ssskdgsslstllekie.nkgptllli............................................kdekkyifGaflsqpwkssnkkfygdse 57 
                 +s+ +g s+s++ +++   ++pt+ll+                                            ++e   ++Ga+++ pwk+s+++f+g+s+
  EPX72384.1 299 NSNDHGYSMSSIESRVLnFNEPTILLFkghriserkrnsrqltfekkypkkysndphqctkrldlfenhksEEEFPIVLGAYITTPWKQSQSEFFGNSN 397
                 55555555555555555333555555555555555555555555555555555555555556666666544333335********************** PP

         TLD  58 sflfslspkfkvykstgkn..kaylntssdglgfGggqp...........kfsLwidsslekgtsrhs..etfeng.llsg.aseerfkikdiEVWgl 138
                 sflf+l+p+++v+++t+++  ++++  +  g+ fG + +           ++ + id+sle g +rh   ++fe g +l+g  +eerf i ++EV g+
  EPX72384.1 398 SFLFQLRPRHQVFRATKTDssFCIFDKTL-GICFGLRRNhvtndllvespGVTMLIDDSLEYGFFRHAghGAFEEGkQLTGaLFEERFLIHNLEVIGI 494
                 ***************77773244444444.8*****999*****************************9*****886888899************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (508 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       398  (0.0221987); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3575.29
//
Query:       EPX72385.1  [L=244]
Description: DUF55 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.6e-38  130.0   0.1    6.6e-38  130.0   0.1    1.9  3  EVE       EVE domain


Domain annotation for each model (and alignments):
>> EVE  EVE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.0   0.1   3.7e-42   6.6e-38       1     144 [.      10     170 ..      10     171 .. 0.95
   2 ?   -1.5   0.2      0.13   2.2e+03     106     123 ..     177     194 ..     172     205 .. 0.61
   3 ?   -2.4   0.3      0.25   4.4e+03      83      83 ..     205     205 ..     185     238 .. 0.49

  Alignments for each domain:
  == domain 1  score: 130.0 bits;  conditional E-value: 3.7e-42
                 -EEEEEEBHHT.........SHHHHH....CHHHCEEE-EE-GHHHHHHHC.C--TT-EEEEEETSSSS-EEEEEEEEECEEEE-GGGG-TTSTT--TT CS
         EVE   1 ayWllksepde.........fsiddl....krkkeegWdgvrnyqarnllr.amkkGDlvlfYhsgeklqaivgiaeVvseaypdetqfdpkskyydpk 85 
                 +yWl+k+e ++         f ++ l    k +k e W+gvrny+arn++r +m +GD++++Y s++k + i g++e++s+++pd +  dp+++yydpk
  EPX72385.1  10 KYWLMKAEGESrivkgidvaFTFEMLekitKDGKMESWSGVRNYEARNMIRdQMSVGDYAFLYCSNCKFPHIKGVMEICSNPHPDDSCWDPSDPYYDPK 108
                 6*********9999******66666555699999***************************************************************** PP

                 TBTTS-.-EEEEEEEEEEEEEEEEHHHHTTHG..TCTTSHHHHCCT-SEEEE-HHHHHHHHH CS
         EVE  86 skkekp.wlrvdvkpvkklkrplslkelkaep..elegmkllrkgrlsvrpvteedwelile 144
                 s+ke+p w+ + v+   +lkr+++l+elk +   +l++m+ll+++rls+++v++e+w++i +
  EPX72385.1 109 STKENPrWYSIGVQSRYPLKRSITLRELKMHLngKLSQMSLLNRARLSISKVRQEEWDFIHQ 170
                 ******************************64559*************************87 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.13
                 EEEHHHHTTHGTCTTSHH CS
         EVE 106 plslkelkaepelegmkl 123
                 p +++e +++++l++mk 
  EPX72385.1 177 PSEIQEAREKENLKEMKK 194
                 555555555555555543 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 0.25
                 - CS
         EVE  83 d 83 
                 d
  EPX72385.1 205 D 205
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1754  (0.0978303); expected 358.6 (0.02)
Passed bias filter:                      615  (0.034302); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.29s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 1583.71
//
Query:       EPX72386.1  [L=447]
Description: kinetochore protein Mis17 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.12   12.3   1.7       0.39   10.8   1.7    1.9  1  AT_hook   AT hook motif


Domain annotation for each model (and alignments):
>> AT_hook  AT hook motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   1.7   2.1e-05      0.39       3      12 ..     112     121 ..     112     122 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 2.1e-05
     AT_hook   3 kRGRPrKaat 12 
                 kRGRPrK++t
  EPX72386.1 112 KRGRPRKDHT 121
                 8******986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (447 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       957  (0.0533772); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 2967.64
//
Query:       EPX72387.1  [L=336]
Description: transcription factor TFIIH complex subunit Pmh1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    9.6e-54  182.3  20.6    1.2e-53  181.9  20.6    1.1  1  MAT1          CDK-activating kinase assembly factor MAT1
      1e-29  102.1   7.8    2.1e-29  101.2   7.8    1.5  1  zf-C3HC4_5    Zinc finger, C3HC4 type (RING finger)
    0.00026   20.8   4.2     0.0014   18.5   0.6    2.4  2  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
    0.00031   20.3   0.8    0.00059   19.4   0.8    1.5  1  Zn_ribbon_17  Zinc-ribbon, C4HC2 type
    0.00064   20.0   6.0      0.002   18.4   6.1    1.8  1  zf-RING_2     Ring finger domain
     0.0041   16.9   7.1      0.015   15.1   7.1    1.9  2  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
     0.0076   16.2   4.8      0.032   14.2   1.1    2.3  2  zf-RING_5     zinc-RING finger domain
  ------ inclusion threshold ------
      0.029   14.2   7.3       0.18   11.6   2.1    2.4  2  zf-RING_4     RING/Ubox like zinc-binding domain
      0.031   14.1   8.6       0.13   12.1   8.3    2.0  2  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
        1.4    9.4   7.3       0.38   11.2   3.6    2.0  2  RED_C         RED-like protein C-terminal region
        1.5    8.7   8.5        4.1    7.3   2.3    2.4  2  Prok-RING_4   Prokaryotic RING finger family 4
        1.9    8.5   8.4       0.13   12.1   3.3    1.7  2  DUF3797       Domain of unknown function (DUF3797)
        2.7    8.1   6.9        6.3    6.9   6.9    1.7  1  zf-RING_UBOX  RING-type zinc-finger


Domain annotation for each model (and alignments):
>> MAT1  CDK-activating kinase assembly factor MAT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  181.9  20.6     9e-57   1.2e-53       1     167 [.      66     232 ..      66     270 .. 0.89

  Alignments for each domain:
  == domain 1  score: 181.9 bits;  conditional E-value: 9e-57
        MAT1   1 LRknkFrvQiFeDvevekEvdiRkrvlkifNkkeeDFesLkeYndYLeeveeivfnLtngidveeTekkleqYekenkelIlknkeklkqeeeeleele 99 
                 LRk+kFr+Q+FeD+++e+E+diR+r++kifNk ++DFesL+eYndYLeeve+++f+L++++dveeTe k++qYek+n+e+I+ n++++++e++ l+++e
  EPX72387.1  66 LRKAKFREQTFEDAQIEREIDIRRRIAKIFNKGQQDFESLQEYNDYLEEVENLTFKLIYQVDVEETETKVQQYEKQNRESIALNSARAAAESRLLAQNE 164
                 9************************************************************************************************** PP

        MAT1 100 elekeekeekrkeekqeeeeekekkekakeelideLatsskdaeeiiekvkkkakkkkssekekleel 167
                  l +++k+e+r+ + +e+e e+e++e+ ++++i++Lats kd ++i++ +++ +k+++++ + +  ++
  EPX72387.1 165 ILLRKQKQEARDAAVREHEMERERREQVEQQIIHDLATSGKDPNKIVKLTETLKKHREKNDSPQPISS 232
                 *************************************************9999999955555544333 PP

>> zf-C3HC4_5  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.2   7.8   1.5e-32   2.1e-29       1      50 [.      13      62 ..      13      63 .. 0.99

  Alignments for each domain:
  == domain 1  score: 101.2 bits;  conditional E-value: 1.5e-32
  zf-C3HC4_5  1 deiCPvCkssrYlnpdleflinpeCYhkmCesCvdRlFsdGPnqCPvagC 50
                de+CP+C+++rYlnp++++linpeCYhkmCesCvdR+F++GP+ CP++gC
  EPX72387.1 13 DEKCPLCRADRYLNPNMKLLINPECYHKMCESCVDRIFTTGPAACPTPGC 62
                89************************************************ PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.2     0.066        91      33      41 .]      11      19 ..       2      19 .. 0.82
   2 !   18.5   0.6     1e-06    0.0014      16      39 ..      36      58 ..      21      59 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.066
                TSSB--TTT CS
    zf-C3HC4 33 rkkvkCPlC 41
                ++ +kCPlC
  EPX72387.1 11 KNDEKCPLC 19
                68899**** PP

  == domain 2  score: 18.5 bits;  conditional E-value: 1e-06
                TTS--B-CHHHHHHHHCTSSB--T CS
    zf-C3HC4 16 eCkHsfCskCirkilksrkkvkCP 39
                eC H++C++C+++i    +   CP
  EPX72387.1 36 ECYHKMCESCVDRIFT-TGPAACP 58
                8***************.8888899 PP

>> Zn_ribbon_17  Zinc-ribbon, C4HC2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.8   4.3e-07   0.00059       5      50 ..      14      63 ..      10      70 .. 0.79

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 4.3e-07
  Zn_ribbon_17  5 ksCayCe....lavkgrvvlcgvCeHvlHasCarewfenddlaeCps.GCG 50
                  ++C +C     l+ + ++++ ++C H + +sC++  f+++  a Cp+ GCG
    EPX72387.1 14 EKCPLCRadryLNPNMKLLINPECYHKMCESCVDRIFTTGP-AACPTpGCG 63
                  5666665222245566788999*******************.********* PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   6.1   1.5e-06     0.002       2      42 ..      15      59 ..      14      62 .. 0.79

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 1.5e-06
   zf-RING_2  2 eCpIC.leelssads.vlll.pCgHvfhreClerwlrssst.CPl 42
                +Cp+C  +++ +++  +l+  +C H ++++C++r++++ +  CP+
  EPX72387.1 15 KCPLCrADRYLNPNMkLLINpECYHKMCESCVDRIFTTGPAaCPT 59
                7****65888554443556636**************99999**96 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.6      0.15   2.1e+02      34      40 .]      13      19 ..      10      19 .. 0.72
   2 !   15.1   7.1   1.1e-05     0.015       1      39 [.      15      59 ..      15      60 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.15
  zf-C3HC4_2 34 kneCPlC 40
                 ++CPlC
  EPX72387.1 13 DEKCPLC 19
                349**** PP

  == domain 2  score: 15.1 bits;  conditional E-value: 1.1e-05
  zf-C3HC4_2  1 kCpiC.ldmlkdpsvvt.....pCgHvfCqkCilrsLeekn.eCPl 39
                kCp+C  d++ +p + +     +C H+ C++C++r  + +   CP+
  EPX72387.1 15 KCPLCrADRYLNPNM-KllinpECYHKMCESCVDRIFTTGPaACPT 59
                799**5589999954.4467899*****************99***6 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.1     0.073     1e+02      35      43 ..      12      20 ..       4      21 .. 0.78
   2 !   14.2   1.1   2.3e-05     0.032      19      43 ..      36      63 ..      22      64 .. 0.90

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.073
   zf-RING_5 35 keavCpiCr 43
                ++ +Cp+Cr
  EPX72387.1 12 NDEKCPLCR 20
                5789****9 PP

  == domain 2  score: 14.2 bits;  conditional E-value: 2.3e-05
   zf-RING_5 19 sCgHifCekClkkll.ekeavCpi..Cr 43
                +C+H +Ce+C+++ + + +a Cp+  C+
  EPX72387.1 36 ECYHKMCESCVDRIFtTGPAACPTpgCG 63
                7**************999****987776 PP

>> zf-RING_4  RING/Ubox like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.2     0.016        22      34      45 ..      10      21 ..       4      24 .. 0.81
   2 ?   11.6   2.1   0.00013      0.18      19      41 ..      36      58 ..      29      64 .. 0.90

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.016
   zf-RING_4 34 eeeegrCPaCre 45
                ++++++CP Cr 
  EPX72387.1 10 KKNDEKCPLCRA 21
                67799******7 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 0.00013
   zf-RING_4 19 eCgyqiClfCyhrileeeegrCP 41
                eC +++C  C +ri ++  + CP
  EPX72387.1 36 ECYHKMCESCVDRIFTTGPAACP 58
                8*********************8 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.4    0.0096        13      35      45 ..      11      21 ..       6      24 .. 0.82
   2 ?   12.1   8.3   9.7e-05      0.13       2      43 ..      13      62 ..      12      68 .. 0.75

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0096
                HTT-B-TTT-- CS
  zf-C3HC4_3 35 krkkkCpiCrr 45
                k+++kCp+Cr+
  EPX72387.1 11 KNDEKCPLCRA 21
                4789*****97 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 9.7e-05
                GSB-TTTSSS.....BS-EEETT.EEEEEE-HHHHHHHHH.TT-B-TT..T CS
  zf-C3HC4_3  2 deeCviCler.....prnvvllp.CgHlvlCeeCaekllk.rkkkCpi..C 43
                de+C++C        + + ++ p C H  +Ce+C++++     + Cp   C
  EPX72387.1 13 DEKCPLCRADrylnpNMKLLINPeCYHK-MCESCVDRIFTtGPAACPTpgC 62
                789*****9444422333455556****.*********9999999*97555 PP

>> RED_C  RED-like protein C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   3.6   0.00027      0.38      36     105 ..      97     175 ..      68     182 .. 0.67
   2 ?   -1.9   0.6       3.2   4.5e+03      74      81 ..     187     195 ..     168     228 .. 0.43

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00027
       RED_C  36 vgrwdfdteeeyseymekkealP.kaafqyGvkmadgrktrkkke........kdekakldrelqkiekilkkrkkeee 105
                  g+ df++ +ey++y e+ e l  k  +q  v +++ + ++ +k+          ++a   r l + e +l+k+k+e++
  EPX72387.1  97 KGQQDFESLQEYNDYLEEVENLTfKLIYQVDVEETETKVQQYEKQnresialnSARAAAESRLLAQNEILLRKQKQEAR 175
                 5789*****************96699******99998877666641122222122222223334444444455555544 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 3.2
       RED_C  74 trkkk.ekd 81 
                  r+++ e++
  EPX72387.1 187 ERREQvEQQ 195
                 222221222 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.4     0.018        25      28      38 ..      11      21 ..       7      30 .. 0.81
   2 ?    7.3   2.3     0.003       4.1      15      39 ..      35      65 ..      24      71 .. 0.73

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.018
  Prok-RING_4 28 kdlssCPlCqr 38
                 k+ + CPlC+ 
   EPX72387.1 11 KNDEKCPLCRA 21
                 56679****95 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.003
  Prok-RING_4 15 p.CgHlvCkeCfdskdls...sCPl..Cqrr 39
                 p C H +C++C d    +   +CP   C + 
   EPX72387.1 35 PeCYHKMCESCVDRIFTTgpaACPTpgCGKI 65
                 44***********995555669985446655 PP

>> DUF3797  Domain of unknown function (DUF3797)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   3.3   9.6e-05      0.13      15      43 ..      15      43 ..      10      47 .. 0.92
   2 ?   -3.4   0.2         7   9.7e+03      15      22 ..      56      63 ..      55      66 .. 0.54

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 9.6e-05
     DUF3797 15 qCPeCgNnkvlNsegkviieddtfyreCk 43
                +CP C  ++ lN + k+ i+ + + + C+
  EPX72387.1 15 KCPLCRADRYLNPNMKLLINPECYHKMCE 43
                6***************************6 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 7
     DUF3797 15 qCPeCgNn 22
                +CP  g  
  EPX72387.1 56 ACPTPGCG 63
                68764444 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   6.9    0.0045       6.3       1      29 [.      16      48 ..      16      63 .. 0.75

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0045
  zf-RING_UBOX  1 CpICl.elftdP....lvl.pCGHtFCreClwels 29
                  Cp C+ + + +P    l+  +C H  C++C+   +
    EPX72387.1 16 CPLCRaDRYLNPnmklLINpECYHKMCESCV--DR 48
                  *****9999999975333325*********9..33 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (336 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2237  (0.12477); expected 358.6 (0.02)
Passed bias filter:                      681  (0.0379832); expected 358.6 (0.02)
Passed Vit filter:                        77  (0.00429472); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.58u 0.27s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 2276.75
//
Query:       EPX72388.1  [L=244]
Description: rRNA processing protein Rrp7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-29  101.7   8.1    4.9e-29  100.9   8.1    1.4  1  RRP7      Ribosomal RNA-processing protein 7 (RRP7) C-termina
    9.9e-07   28.7   0.2    2.5e-05   24.1   0.0    2.5  2  RRM_Rrp7  Rrp7 RRM-like N-terminal domain


Domain annotation for each model (and alignments):
>> RRP7  Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.9   8.1   5.4e-33   4.9e-29       2     119 .]     124     238 ..     123     238 .. 0.92

  Alignments for each domain:
  == domain 1  score: 100.9 bits;  conditional E-value: 5.4e-33
        RRP7   2 ksrpseeelqeevdeymeefdkeeeeekkeekkkeeevDeDGfvtVtrgkkaaakeeaaeekakkkekkkkkkkelldFYrFQirekkkeelaeLrkkF 100
                 +++p+ + l+e+v++ym++ +k+e  ek++  k ++++DeDGf+ V+rg    +++  + e+a+k  +kkk++  ++dFYrFQ r++kk++l++L +kF
  EPX72388.1 124 RQFPNGQVLEESVEAYMKRLTKQEISEKNRLRKLRNQPDEDGFIPVVRGT---HQSVGNPEEAEKLLQKKKETGIHKDFYRFQLRNEKKKKLQDLAHKF 219
                 67999*******************************************44...444456778889999999989999********************** PP

        RRP7 101 eeDkekieelkekrkfkpy 119
                 e Dk++ie+lk +r+f+py
  EPX72388.1 220 ELDKQRIEQLKVNRRFNPY 238
                 ******************8 PP

>> RRM_Rrp7  Rrp7 RRM-like N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.0   2.8e-09   2.5e-05       3      65 ..       7      60 ..       4      87 .. 0.83
   2 ?    1.9   0.1      0.02   1.7e+02     132     162 .]      94     122 ..      79     122 .. 0.79

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 2.8e-09
    RRM_Rrp7  3 kGFlvlPlkLpkskklknkatHYlylkkHqtknndeessrslFlvNlPiettletlkkffqkv 65
                kGF+ l ++L++s     ++  Y++l+     ++d+e ++s++lvN+P++tt ++l+k++ + 
  EPX72388.1  7 KGFVKLKITLDDS-----EKNQYIFLRA---DSEDPE-GKSVYLVNVPVTTTEKVLRKAISNL 60
                7999999999999.....7889****96...445555.89******************99875 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.02
    RRM_Rrp7 132 alkKlsksstkkeWeldkkeplgsqrflnky 162
                  lk +sksst++ W     +  g++r+l+ky
  EPX72388.1  94 VLKSASKSSTSIPWIS--SQSSGLKRYLEKY 122
                 4677889999999*99..5555999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1350  (0.075297); expected 358.6 (0.02)
Passed bias filter:                      577  (0.0321825); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 1650.26
//
Query:       EPX72389.1  [L=250]
Description: hypothetical protein SOCG_00153 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.044   13.8   0.2       0.24   11.4   0.0    2.2  2  GUN4_N    ARM-like repeat domain, GUN4-N terminal
       0.31   11.3   2.6       0.35   11.1   0.2    2.4  2  Mrx7      MIOREX complex component 7
        2.1    7.1  13.8      0.032   13.1   3.4    2.0  2  XRCC4     DNA double-strand break repair and V(D)J recombinat


Domain annotation for each model (and alignments):
>> GUN4_N  ARM-like repeat domain, GUN4-N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1      0.33     2e+03       6      27 ..      66      87 ..      63      92 .. 0.71
   2 ?   11.4   0.0     4e-05      0.24       5      42 ..     117     154 ..     113     157 .. 0.92

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.33
                -CHHCHHHHHHCHHS-CCCHHH CS
      GUN4_N  6 qsedlseLrqqLesgsekkqlq 27
                +  + +e+r+++e+g +k ++ 
  EPX72389.1 66 PKSEKKEKRERIEKGAKKRKRL 87
                5667889999999999876543 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 4e-05
                 --CHHCHHHHHHCHHS-CCCHHHHHHHHCTSHHHHHHH CS
      GUN4_N   5 eqsedlseLrqqLesgsekkqlqaiaqLakaGeeGlei 42 
                 ++s++ +e    +++ s+++q+q +++ +++G++G ++
  EPX72389.1 117 DDSFNKEEFTTPIRNPSDNSQQQFMSSSSNLGTKGTDV 154
                 6799999****************************987 PP

>> Mrx7  MIOREX complex component 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.2      0.86   5.2e+03      31      51 ..      63      71 ..      41      89 .. 0.57
   2 ?   11.1   0.2   5.9e-05      0.35      34      65 ..     213     244 ..     203     245 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.86
        Mrx7 31 teiseekqesellykptrrqk 51
                 +            kp++++k
  EPX72389.1 63 GS------------KPKSEKK 71
                22............2222222 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 5.9e-05
        Mrx7  34 seekqesellykptrrqklkaFrklFldElkn 65 
                 +++++es+ ++ +t++ kl+ F klF++E k+
  EPX72389.1 213 KSTRNESDTKNSKTELRKLQTFGKLFMKEGKR 244
                 336889999********************886 PP

>> XRCC4  DNA double-strand break repair and V(D)J recombination protein XRCC4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   3.4   5.3e-06     0.032     197     332 ..      23     160 ..       9     168 .. 0.68
   2 ?    0.3   2.4      0.04   2.4e+02     207     261 ..     174     228 ..     164     234 .. 0.62

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 5.3e-06
       XRCC4 197 RsLq..kllkelqeseesteqkrekaaksdkasdeeedydgstdeeseeeakkpsskaeasskddsllsseDitdvAPsRKrRqRlqk..kleteakva 291
                 RsL   k + ++ e+ +++  ++ ++ ++   ++ +++y gs    +++e+++  +k + ++k+ s+l+ ++++ + Ps  +  R q+  +++ +  ++
  EPX72389.1  23 RSLPksKFILDASETIKQNAIQNYEPGHKLIPPKINHQYRGSKPKSEKKEKRERIEKGAKKRKRLSILTANNVVPISPSMDKASRGQEenNFSFDDSFN 121
                 777523455566666666666777777777778999******999888888889999999*******************99988877511567788888 PP

       XRCC4 292 tqeeekkekekldssakkaskke.slsaekksletaknsaep 332
                 ++e ++  ++  d+s+++  +++ +l ++++  +      +p
  EPX72389.1 122 KEEFTTPIRNPSDNSQQQFMSSSsNLGTKGTDVQNHV---SP 160
                 8888888887777777765554303333333333333...33 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.04
       XRCC4 207 qeseesteqkrekaaksdkasdeeedydgstdeeseeeakkpsskaeasskddsl 261
                 ++++es++++  +++k+ ka+  + ++ g td+e   ++k+++++++++++++ l
  EPX72389.1 174 KNTKESRNSSAFSSSKNYKANPPNPQFLGNTDDELPLKEKSTRNESDTKNSKTEL 228
                 2233333333333345555666677777999999988888777777777666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1106  (0.0616878); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.28s 00:00:00.74 Elapsed: 00:00:00.45
# Mc/sec: 1679.92
//
Query:       EPX72390.1  [L=232]
Description: hypothetical protein SOCG_00154 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       738  (0.0411624); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 1625.32
//
Query:       EPX72391.1  [L=441]
Description: dihydrolipoamide S-succinyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-75  254.1   0.0    1.4e-75  253.8   0.0    1.1  1  2-oxoacid_dh     2-oxoacid dehydrogenases acyltransferase (ca
    4.8e-17   61.6   0.1    8.5e-17   60.8   0.1    1.4  1  Biotin_lipoyl    Biotin-requiring enzyme
     0.0011   18.7   0.2      0.026   14.3   0.2    2.4  2  Biotin_lipoyl_2  Biotin-lipoyl like
  ------ inclusion threshold ------
      0.013   15.3   0.0      0.025   14.5   0.0    1.4  1  GCV_H            Glycine cleavage H-protein
      0.034   14.1   0.0       0.52   10.3   0.0    2.3  2  RnfC_N           RnfC Barrel sandwich hybrid domain
      0.037   14.7   0.2        5.7    7.7   0.1    2.5  2  HlyD_3           HlyD family secretion protein
       0.32   10.4   2.5       0.33   10.4   1.4    1.7  2  DUF2868          Protein of unknown function (DUF2868)


Domain annotation for each model (and alignments):
>> 2-oxoacid_dh  2-oxoacid dehydrogenases acyltransferase (catalytic domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  253.8   0.0   5.3e-79   1.4e-75       3     233 .]     208     440 ..     206     440 .. 0.97

  Alignments for each domain:
  == domain 1  score: 253.8 bits;  conditional E-value: 5.3e-79
                   XXXXXXXXXXXXXXXXXXXXXX.XXXEEEEEEEEE-HHHHHHHHHHHHHHHHTT-----HHHHHHHHHHHHHHH-GGGG-EE...EESEEEE--SS- CS
  2-oxoacid_dh   3 eeervplsgirkaiakrlteskqeiphftlsdevdvtallelrkelkekeakeekakltlldflikavalAlkefPelnasvd..eeekeivvkkhv 97 
                   +eerv+++++r +ia+rl+es++ ++ +t+++e+d++a++++rk++k++  k++ +kl +++f+ ka+++A+k++P++n  ++  ++ +++v+++  
    EPX72391.1 208 NEERVKMNRMRLRIAERLKESQTRAASLTTFNECDMSAVINFRKKYKDEILKSTGIKLGFMSFFSKACTQAMKQVPAINGAIEgpGNGDTLVYRDFC 304
                   689***********************************************98777***************************62255588******* PP

                   -EEEE--------EEEE--GGG--HHHHHHHHHHHHHHHTTT---GGGTSS-SEEEE---------------TT-SEEEEE---.B--TTSTT-HT- CS
  2-oxoacid_dh  98 niGvAvatprGLlvPviknadkkslleiakelkelaekaregklkpedleggtftisNlGmlGvtsftPiinppqvaIlgvgrikerpvvkegelvv 194
                   +++vAvatp+GL++Pv++na+++sll +++++++l  kar+gkl+ ed+  gtftisN G++G+ ++tPiin pq+a+lg++++k+r+vv++g++v 
    EPX72391.1 305 DLSVAVATPKGLVTPVVRNAESMSLLALESAIANLGVKARDGKLAIEDMASGTFTISNGGVFGSLYGTPIINLPQTAVLGLHAVKDRAVVVNGQVVS 401
                   ************************************************************************************************* PP

                   --EEEEEEEEETTT--HHHHHHHHHHHHHTT-HHXXXXX CS
  2-oxoacid_dh 195 rkvmtlslsaDHRvidGaeaarFlntlkkllenpeelll 233
                   r++m+l l++DHR++dG ea+ Fl+ +k+++e+p+++ll
    EPX72391.1 402 RPMMYLALTYDHRMVDGREAVTFLRLVKEHIEDPTKMLL 440
                   ************************************985 PP

>> Biotin_lipoyl  Biotin-requiring enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.8   0.1   3.3e-20   8.5e-17       2      73 .]      44     116 ..      43     116 .. 0.98

  Alignments for each domain:
  == domain 1  score: 60.8 bits;  conditional E-value: 3.3e-20
                    EEEESSSEEEEEE..ECSESSSTTCEE-TTSEEEEEECTTEEEEEEBSSSEEEEEESSTTTEEE-TTCEEEEE CS
  Biotin_lipoyl   2 eiksPmiGesveeg.vvevlvkvGdkVkagqvlaeveamKmemeieapkaGvvkeilvkeGdtvevgdllaki 73 
                    +ik+P + es+ eg  +++l+++G+ V++++ +a ve++K   +++ap++Gv+ke lv+eGdt++ ++ +a++
     EPX72391.1  44 QIKTPPFPESISEGtLAQWLKQPGEFVNKDEEIASVETDKIDSPVTAPQSGVLKEHLVSEGDTITIDQNIAVL 116
                    8*********************************************************************986 PP

>> Biotin_lipoyl_2  Biotin-lipoyl like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.085   2.2e+02      10      36 ..      56      82 ..      48      86 .. 0.87
   2 !   14.3   0.2     1e-05     0.026       4      37 ..      87     120 ..      80     122 .. 0.93

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.085
  Biotin_lipoyl_2 10 sGrVaqlnVkdGqrVkaGdvLaelDsr 36
                      G++aq++ + G  V++   +a  +++
       EPX72391.1 56 EGTLAQWLKQPGEFVNKDEEIASVETD 82
                     69***************9999988776 PP

  == domain 2  score: 14.3 bits;  conditional E-value: 1e-05
  Biotin_lipoyl_2   4 sIaapvsGrVaqlnVkdGqrVkaGdvLaelDsra 37 
                      +++ap+sG++++ +V +G+ +   + +a+lD++a
       EPX72391.1  87 PVTAPQSGVLKEHLVSEGDTITIDQNIAVLDDSA 120
                      789999*************************975 PP

>> GCV_H  Glycine cleavage H-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   9.7e-06     0.025      38      73 ..      63      98 ..      57     110 .. 0.91

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 9.7e-06
                ---TT-EE-TT-EEEEEEESS-EEEEE-SSSEEEEE CS
       GCV_H 38 lpevgtkvkkgeslaavEsvKaasevyapvsGevve 73
                l++ g+ v+k+e++a+vE+ K  s+v ap sG + e
  EPX72391.1 63 LKQPGEFVNKDEEIASVETDKIDSPVTAPQSGVLKE 98
                8999****************************8765 PP

>> RnfC_N  RnfC Barrel sandwich hybrid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0    0.0002      0.52      38      78 ..      56      97 ..      44      98 .. 0.88
   2 ?    1.3   0.0      0.13   3.4e+02      43      63 ..      98     118 ..      96     123 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.0002
      RnfC_N 38 iGapakplvkvgdkVlkGqkiaeaeg.fvsapvhasvsGtVk 78
                 G+ a+ l + g+ V+k + ia+ e+  + +pv a+ sG  k
  EPX72391.1 56 EGTLAQWLKQPGEFVNKDEEIASVETdKIDSPVTAPQSGVLK 97
                58889999***************987789**********876 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.13
      RnfC_N  43 kplvkvgdkVlkGqkiaeaeg 63 
                 + lv++gd+++  q ia  + 
  EPX72391.1  98 EHLVSEGDTITIDQNIAVLDD 118
                 579*************97665 PP

>> HlyD_3  HlyD family secretion protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0     0.023        60       7      31 ..      56      80 ..      53      84 .. 0.88
   2 ?    7.7   0.1    0.0022       5.7       2      33 ..      88     119 ..      87     129 .. 0.91

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.023
      HlyD_3  7 dGvvvelnveegevvqagdelleii 31
                 G+++++  ++ge+v++ +e++++ 
  EPX72391.1 56 EGTLAQWLKQPGEFVNKDEEIASVE 80
                59999*****************997 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.0022
      HlyD_3   2 lrApvdGvvvelnveegevvqagdelleiipp 33 
                 ++Ap +Gv++e  v+eg+ ++  ++++ + + 
  EPX72391.1  88 VTAPQSGVLKEHLVSEGDTITIDQNIAVLDDS 119
                 89************************988765 PP

>> DUF2868  Protein of unknown function (DUF2868)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.4   0.00013      0.33     177     250 ..     157     252 ..      89     258 .. 0.83
   2 ?   -2.6   0.0       1.2     3e+03     256     289 ..     407     440 ..     389     441 .] 0.78

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00013
     DUF2868 177 a...........aapePeaapepkaeaepepasep........advlelelderla.elelraglgvrvaasaadgGrld..drearsrvlaslae 250
                 a           +a+ePe  p+p+ ea+p+pas+p        a ++ ++ +e+++  +++r  +++r+++s + +++l+  +++++s+v++  ++
  EPX72391.1 157 AesastpskpapDAKEPEVKPAPQREAPPKPASKPsppkpeftASTATFSRNEERVkMNRMRLRIAERLKESQTRAASLTtfNECDMSAVINFRKK 252
                 145555566667899***************99999*****99988888888888888778888889999988888888876777799999887665 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.2
     DUF2868 256 vlllvdasqpPdretlrfLrelraaageqrvvll 289
                 ++l  d +++  re++ fLr ++++ ++ + +ll
  EPX72391.1 407 LALTYDHRMVDGREAVTFLRLVKEHIEDPTKMLL 440
                 567777777778999********99999888777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (441 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       528  (0.0294495); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 3188.24
//
Query:       EPX72392.1  [L=632]
Description: phospholipid-diacylglycerol acyltransferase Plh1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.2e-128  429.6   0.0   1.5e-128  429.3   0.0    1.1  1  LCAT      Lecithin:cholesterol acyltransferase
     0.0017   18.0   0.1     0.0097   15.4   0.0    2.0  2  Lipase_2  Lipase (class 2)
  ------ inclusion threshold ------
       0.15   11.6   0.0        0.5    9.8   0.0    1.8  2  DUF900    Alpha/beta hydrolase of unknown function (DUF900)


Domain annotation for each model (and alignments):
>> LCAT  Lecithin:cholesterol acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  429.3   0.0  2.5e-132  1.5e-128       1     391 [.     171     592 ..     171     593 .. 0.97

  Alignments for each domain:
  == domain 1  score: 429.3 bits;  conditional E-value: 2.5e-132
        LCAT   1 yFrkelWldldmllslvvd..cwlknlelvldkstglqedapgvkiRadqGfeaieyldkskiagkqyeiwkklvknlvkiGyeknktvvaapYDWRls 97 
                 yFrk+lW++++ml+++ +d  cwl+  +l+ld++tgl  d+pg+++Ra+qGfea++++    i+g  y+iw+k+++nl++iGye+n+ +++a+YDWRls
  EPX72392.1 171 YFRKRLWGSWSMLKAMLLDkqCWLE--HLMLDPKTGL--DPPGIRLRAAQGFEAADFF----ITG--YWIWSKIIENLAAIGYEPNN-MLSASYDWRLS 258
                 9************************..**********..*******************....***..********************.*********** PP

        LCAT  98 ...leerdkYfskLkelieealklsgkkvvliaHSmGnllvlyflkwveaea.......WvdqhikafislgapllGsvkavkallsGenkgipvlsel 186
                    leerd+YfskLk +ie++  ++g+kvvli+HSmG+++++yflkwveae+       Wv+++i++fi+++++l+G++k+++allsGe+k++++l+++
  EPX72392.1 259 ysnLEERDRYFSKLKLFIEYSKLVHGRKVVLISHSMGSQVSYYFLKWVEAEGygnggpgWVNEYIESFINISGSLIGAPKTLAALLSGEMKDTAQLNQF 357
                 *************************************************************************************************** PP

        LCAT 187 tlrvlsksfsss............lsllPkgeevlwkdvawpsdeiliqtpsinltegalvrf......fsdevdlkdllsftlnvlagwvmvkvaedl 267
                 ++++l+k+fs+             +s+lPkg++++w++ +w+ d+   +t    l++g ++++       +  +d +++l+f+ nv+ +++ ++   ++
  EPX72392.1 358 SVYGLEKFFSRAerammvrtmggvSSMLPKGGNLIWGNTSWAADD--DDT--GDLSNGVMIHYrndasdPHSRFDSEQALEFLNNVTSNDFRNMLRTNY 452
                 ******************************************999..333..3588999998855544433389************************* PP

        LCAT 268 dgglsklekelkk..lkkkkyvkeeetklpeaPgvkvyciygvglptergyvyapekkssplnyilsdidyeteesivskdGdetvpkeslel.Ckk.W 362
                 ++gl+++++e+++    + k++++ et+lp+aP++k+yc +gvg+ptergy y ++++++p++++++++ ++ e++iv++dGd+t+p+ +l + C+k W
  EPX72392.1 453 SNGLAWTKDEVERnnKIPAKWINPLETSLPYAPDMKIYCFHGVGKPTERGYFYSKNDEGHPVIDSSVNDGTKIENGIVMDDGDGTLPLIALGFvCNKaW 551
                 ************988889*************************************************************************988**99* PP

        LCAT 363 qd...nkakvkvtvaelkeek.........rsaehvellvs 391
                 ++   n+a+++v+++el +++         rsaehv++l++
  EPX72392.1 552 KTerfNPANISVVNYELRHDPaafdlrggpRSAEHVDILGH 592
                 *****************9999******************98 PP

>> Lipase_2  Lipase (class 2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   1.6e-06    0.0097      18     126 ..     231     336 ..     226     351 .. 0.87
   2 ?   -0.4   0.0      0.11   6.8e+02      74     101 ..     584     613 ..     583     625 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.6e-06
    Lipase_2  18 lskliqkflekgyteaelYattygdteestslerlekCeyvkqlRklilaVlkyTgakkvdivahsmGvpiaRkailGgkcvdtnedLgepltskvdtf 116
                 +sk+i+++   gy+ +++ + +y+ + + ++le+ +   y  +l+ +i+  +   g+ kv  ++hsmG+ ++ +  +  +++   +     ++++++ f
  EPX72392.1 231 WSKIIENLAAIGYEPNNMLSASYDWRLSYSNLEERD--RYFSKLKLFIEYSKLVHGR-KVVLISHSMGSQVSYYFLKWVEAEGYGNGGPGWVNEYIESF 326
                 999*********************999977777777..9***********9999999.**************999999997766666666789999999 PP

    Lipase_2 117 vsvaganaGl 126
                 + ++g   G+
  EPX72392.1 327 INISGSLIGA 336
                 9999877665 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.11
    Lipase_2  74 akkvdivahsmGvpiaRkailGg..kcvdt 101
                 a++vdi +hs+   +  k++ G   + +d+
  EPX72392.1 584 AEHVDILGHSELNEMVLKIVSGHgdEVKDH 613
                 569********9999999999975444455 PP

>> DUF900  Alpha/beta hydrolase of unknown function (DUF900)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0   8.4e-05       0.5      92     122 ..     283     313 ..     260     334 .. 0.78
   2 ?   -1.7   0.0      0.28   1.7e+03      92     121 ..     583     612 ..     581     631 .. 0.67

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 8.4e-05
      DUF900  92 sakkihllaHSmGtwlvlealrqlaieadep 122
                 + +k+ l+ HSmG+++    l+ + +e + +
  EPX72392.1 283 HGRKVVLISHSMGSQVSYYFLKWVEAEGYGN 313
                 6789************999999888887764 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.28
      DUF900  92 sakkihllaHSmGtwlvlealrqlaieade 121
                 sa+++++l HS  + +vl+ ++    e ++
  EPX72392.1 583 SAEHVDILGHSELNEMVLKIVSGHGDEVKD 612
                 57899******9999999998876666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (632 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       528  (0.0294495); expected 358.6 (0.02)
Passed bias filter:                      488  (0.0272185); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.28s 00:00:00.90 Elapsed: 00:00:00.46
# Mc/sec: 4124.46
//
Query:       EPX72393.1  [L=1155]
Description: condensin complex non-SMC subunit Cnd1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.2e-45  152.9   5.7    1.6e-40  138.8   0.3    4.3  3  Cnd1      non-SMC mitotic condensation complex subunit 1
    1.8e-32  112.5   3.7    1.8e-32  112.5   3.7    2.3  2  Cnd1_N    non-SMC mitotic condensation complex subunit 1, N-t
    9.3e-08   32.4   0.1     0.0065   16.8   0.0    4.0  3  HEAT_2    HEAT repeats
    1.2e-05   25.1   0.5        3.1    8.3   0.0    4.8  4  HEAT      HEAT repeat
    0.00084   19.5   0.2        1.3    9.3   0.0    3.5  3  RTP1_C1   Required for nuclear transport of RNA pol II C-term
     0.0044   17.5   0.1         17    6.1   0.0    4.2  4  HEAT_EZ   HEAT-like repeat
  ------ inclusion threshold ------
       0.14   12.7   2.4        4.4    7.8   0.2    3.7  3  ParB      ParB family


Domain annotation for each model (and alignments):
>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1      0.77     2e+03      59      78 ..       5      24 ..       2      99 .. 0.67
   2 !   13.8   0.1   1.8e-05     0.045      19      89 ..     357     430 ..     350     443 .. 0.78
   3 !  138.8   0.3   6.3e-44   1.6e-40       1     162 []     973    1136 ..     973    1136 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.77
        Cnd1 59 flselaklleDenprVvana 78
                +ls+l+k ++De++++ ++ 
  EPX72393.1  5 LLSRLKKYIHDEENSILDSL 24
                67777777777777776654 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 1.8e-05
        Cnd1  19 veylvepLrkrLkDedpyVRktaaivvakL..ilndmvkekgflsela.klleDenprVvanalaalteiseks 89 
                 v+ ++e L+ rL D +py R   + v+ ++  +  ++ ++++ ++el  ++++D ++ V+ na+ +++++++  
  EPX72393.1 357 VQSILEVLEDRLLDISPYCRTKILQVFFRIfeLPIKYPQKRQEIAELTiRCMQDRSSHVRRNAIRLFSKLLTTH 430
                 77888889999999999999999999999977666777777766666527999999999999999999888765 PP

  == domain 3  score: 138.8 bits;  conditional E-value: 6.3e-44
        Cnd1    1 liRalairtlg..cirvpnlveylvepLrkrLkDedpyVRktaaivvakLilndmvkekgflselaklleDenprVvanalaalteiseksenaiyn 95  
                  liR++++++l+  ++++++++++++e L++rL D+dp V+kt+++++a Lil++ +k+kg+l  +a+ leDe++r+ ++a++++t+ s k+ n +yn
  EPX72393.1  973 LIRNNLVIALAdlTVCFNHFIDEISEFLYRRLLDPDPSVKKTCFMTLAFLILAGQIKVKGQLGIMARSLEDEDARIADLAKMFFTDFSAKD-NSVYN 1068
                  7******************************************************************************************.***** PP

        Cnd1   96 llpdiisklsdalne..csewgqitilefLlsyipkdkqeaeslveklcprlqhansavvlaaikviLs 162 
                  +++di+s ls++ ++   +  ++++i++fL+s+i+k++  +++l+e+l +rl  ++s+++++ +++ Ls
  EPX72393.1 1069 NFIDIFSVLSKSSEDqdEEDTKFKHIVRFLMSFIEKERY-TKQLTERLSARLPRCKSQRQWNHVAYALS 1136
                  **********9666633666799****************.*************************9985 PP

>> Cnd1_N  non-SMC mitotic condensation complex subunit 1, N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.5   3.7   7.2e-36   1.8e-32       2     166 .]      73     234 ..      72     234 .. 0.94
   2 ?   -2.5   0.1       1.6   4.1e+03     117     142 ..    1085    1110 ..    1082    1114 .. 0.85

  Alignments for each domain:
  == domain 1  score: 112.5 bits;  conditional E-value: 7.2e-36
      Cnd1_N   2 klksklldlllsglsallesvesdlessdeadsvashknaLemygfllqwlvealekessskssaasasargrkkkkkkkkkkeeawdweaqrerilel 100
                 +lk+k++dll+s + ++++ +e ++  ++ a+++   +++Le  g  +q ++++l ++++ +  ++s+s ++r kkk+ ++++ ++w+   +++++l++
  EPX72393.1  73 NLKNKVYDLLTSIIGSETAVLEDLII-AN-ATDFFVPQTNLESVGIAIQLTIKSLSESNQLSIIHTSSS-SSRDKKKNVSQQQSSTWNGLIHVNSFLDS 168
                 789******************99999.67.8************************99999999887777.66666668********************* PP

      Cnd1_N 101 iakvlelklsrlfqttserdeFislftrpaysllEneallKdksirdaifkvlclavkkhghalaa 166
                 +++++  klsr+++t+serd+F+slf++p+y l+E+e+ +K++  r  +f+++ lavk h++++aa
  EPX72393.1 169 VSNLFHKKLSRVWTTSSERDMFLSLFLKPVYTLMESETNMKNSGFRVRMFDLISLAVKYHHQTAAA 234
                 **************************************************************9876 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.6
      Cnd1_N  117 serdeFislftrpaysllEneallKd 142 
                  +e+d+  + ++r+++s +E+e ++K+
  EPX72393.1 1085 DEEDTKFKHIVRFLMSFIEKERYTKQ 1110
                  67777778899**********99995 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.018        45       4      26 ..     314     339 ..     309     383 .. 0.52
   2 !    5.8   0.0    0.0071        18      28      53 ..     396     421 ..     386     428 .. 0.87
   3 !   16.8   0.0   2.6e-06    0.0065       1      77 [.     959    1047 ..     959    1052 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.018
      HEAT_2   4 LlqalendpdpevrraairaLg....r 26 
                 L ++l +++++ +r a+i+++g    +
  EPX72393.1 314 LTKLL-DSESYTLRCAIIEVIGnvilD 339
                 44555.666666666666666644441 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0071
      HEAT_2  28 gnpealpaLvellededpavRraaae 53 
                 + +e+ ++ +++++d +++vRr+a++
  EPX72393.1 396 KRQEIAELTIRCMQDRSSHVRRNAIR 421
                 5689999999**************98 PP

  == domain 3  score: 16.8 bits;  conditional E-value: 2.6e-06
      HEAT_2    1 ldaLlqalendpdpevrraairaLg......rignpealpaLvellededpavRraaaeaL......gaigdpealpaLkelldddddd 77  
                  l++L+ +le++++p +r + ++aL+      +   +e+ + L + l d+dp v ++  ++L      g+i+ +  l + +++l d+d +
  EPX72393.1  959 LPLLITILEKCENPLIRNNLVIALAdltvcfNHFIDEISEFLYRRLLDPDPSVKKTCFMTLaflilaGQIKVKGQLGIMARSLEDEDAR 1047
                  689**********************776644222369************************4444444778899999999999776654 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0     0.026        67       4      27 ..     313     336 ..     311     338 .. 0.89
   2 !    8.3   0.0    0.0012       3.1       6      28 ..     405     427 ..     402     430 .. 0.88
   3 ?   -0.7   0.1      0.91   2.3e+03       2      27 ..     959     985 ..     959     987 .. 0.80
   4 !    6.2   0.0    0.0056        14       4      25 ..     999    1020 ..     996    1023 .. 0.86

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.026
                 HHHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAakaLgal 27 
                 +l kll ++s   R+a ++ +g++
  EPX72393.1 313 ILTKLLDSESYTLRCAIIEVIGNV 336
                 7899****************9986 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.0012
                 HHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   6 lkllsDpspeVReaAakaLgala 28 
                 +++++D s++VR++A++ + +l+
  EPX72393.1 405 IRCMQDRSSHVRRNAIRLFSKLL 427
                 5789*************999986 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.91
                 HHHHHHHHT-.SSHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsD.pspeVReaAakaLgal 27 
                 lPll++ l+  ++p +R + + aL++l
  EPX72393.1 959 LPLLITILEKcENPLIRNNLVIALADL 985
                 577777775558999********9988 PP

  == domain 4  score: 6.2 bits;  conditional E-value: 0.0056
                  HHHHHHT-SSHHHHHHHHHHHH CS
        HEAT    4 lllkllsDpspeVReaAakaLg 25  
                  +l + l Dp+p+V ++++ +L+
  EPX72393.1  999 FLYRRLLDPDPSVKKTCFMTLA 1020
                  5778899***********9997 PP

>> RTP1_C1  Required for nuclear transport of RNA pol II C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   0.0    0.0005       1.3      13      77 ..     373     436 ..     357     478 .. 0.80
   2 ?   -3.0   0.0       3.2   8.3e+03      69      89 ..     657     677 ..     648     689 .. 0.70
   3 !    6.0   0.0    0.0052        13       7      72 ..    1003    1082 ..     999    1111 .. 0.90

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.0005
     RTP1_C1  13 lpvrahglvlLrkliekkskeavldiekilkllleaLkdedsYvYLnaikgLvaLadvfpeevlk 77 
                 + +r++ l+   +++e    +  ++ ++i++l +++++d  s v  nai+++++L +++p +v++
  EPX72393.1 373 PYCRTKILQVFFRIFELPI-KYPQKRQEIAELTIRCMQDRSSHVRRNAIRLFSKLLTTHPFSVMH 436
                 5555555666666666554.5678899*********************************99985 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 3.2
     RTP1_C1  69 dvfpeevlklLleeyeeenek 89 
                 d+fp+ v+ +L + y+ ++++
  EPX72393.1 657 DYFPALVITKLWQVYSYVKKD 677
                 678999999999999554444 PP

  == domain 3  score: 6.0 bits;  conditional E-value: 0.0052
     RTP1_C1    7 dlqdpllpvrahglvlLrkliekkske..............avldiekilkllleaLkdedsYvYLnaikgLvaLadvfp 72  
                   l dp + v+  + ++L+ li + + +              + + i  ++k++++  + +d  vY n i +++ L +  +
  EPX72393.1 1003 RLLDPDPSVKKTCFMTLAFLILAGQIKvkgqlgimarsledEDARIADLAKMFFTDFSAKDNSVYNNFIDIFSVLSKSSE 1082
                  678999999999999999999999887899999999999988999999**********************9999988765 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       2.8   7.1e+03      33      54 ..     314     335 ..     298     336 .. 0.62
   2 !    6.1   0.0    0.0066        17      30      55 .]     400     426 ..     392     426 .. 0.79
   3 ?    0.2   0.1      0.44   1.1e+03      27      53 ..     956     983 ..     939     985 .. 0.81
   4 ?    5.1   0.0     0.013        33      25      53 ..     992    1020 ..     989    1022 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 2.8
     HEAT_EZ  33 LlalLnddsd.eVRaaAagaLgn 54 
                 L +lL d+++ + R+a +  +gn
  EPX72393.1 314 LTKLL-DSESyTLRCAIIEVIGN 335
                 33444.34444779998888887 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0066
     HEAT_EZ  30 lpaLl.alLnddsdeVRaaAagaLgnl 55 
                 +++L  ++++d s++VR +A++ +++l
  EPX72393.1 400 IAELTiRCMQDRSSHVRRNAIRLFSKL 426
                 4444449999*************9986 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.44
     HEAT_EZ  27 peilpaLlalLnddsd.eVRaaAagaLg 53 
                  e lp+L+  L+ ++  ++R + ++aL+
  EPX72393.1 956 MENLPLLITILEKCENpLIRNNLVIALA 983
                 5789*******99777577******996 PP

  == domain 4  score: 5.1 bits;  conditional E-value: 0.013
     HEAT_EZ   25 lvpeilpaLlalLnddsdeVRaaAagaLg 53  
                  +++ei  +L ++L d++++V++++  +L+
  EPX72393.1  992 FIDEISEFLYRRLLDPDPSVKKTCFMTLA 1020
                  788999999**************998886 PP

>> ParB  ParB family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0      0.15   3.9e+02      15     111 ..     177     270 ..     170     276 .. 0.82
   2 ?   -0.8   0.0       0.8     2e+03      28      96 ..     349     418 ..     331     433 .. 0.67
   3 ?    7.8   0.2    0.0017       4.4      56      97 ..    1071    1112 ..    1033    1152 .. 0.77

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.15
        ParB  15 LlkvaeklekkdvelseliekvkeeiekvqsdtelaedeqkseilklikkeskrlkkpkkkdkavvekLaefedkkqfarkktkkRlvsYefsrlsk 111
                 L+ v  + +++d+ ls +++ v + +e    +t+ +++  + ++ +li+ + k   +  + ++  +++L  fe   ++    ++  +v Yefs l +
  EPX72393.1 177 LSRVWTTSSERDMFLSLFLKPVYTLMES---ETNMKNSGFRVRMFDLISLAVKYHHQTAAAETRIIQSLQYFEHLAEYLADLVHLTTVRYEFSPLAE 270
                 5566666666666777777777776666...8888888999999999999999999999999999***************************98765 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.8
        ParB  28 elseliekvkeeiekvqsdtelaedeqkseilklikkeskrlkkpkkkdkavve.kLaefedkkqfarkk 96 
                 + +++ ++v++ +e ++++  +  +  +++il+++ +  +   k ++k +  +e  ++  +d+  ++r+ 
  EPX72393.1 349 NSESISSNVQSILEVLEDRLLDISPYCRTKILQVFFRIFELPIKYPQKRQEIAElTIRCMQDRSSHVRRN 418
                 3344455555555555556777778888999999888888777777776663331566678888888775 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.0017
        ParB   56 seilklikkeskrlkkpkkkdkavvekLaefedkkqfarkkt 97  
                    i  +++k+s+++ ++ +k k  v  L++f +k+++ ++ t
  EPX72393.1 1071 IDIFSVLSKSSEDQDEEDTKFKHIVRFLMSFIEKERYTKQLT 1112
                  46888899999999999********************99866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1155 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       826  (0.0460706); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.77u 0.30s 00:00:01.07 Elapsed: 00:00:00.45
# Mc/sec: 7728.59
//
Query:       EPX72394.1  [L=510]
Description: CDC7 protein kinase Hsk1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.8e-43  147.4   0.0    5.5e-39  134.1   0.0    3.1  2  Pkinase         Protein kinase domain
      4e-11   42.7   0.1    2.9e-06   26.8   0.0    4.0  3  Pkinase_Tyr     Protein tyrosine kinase
    0.00023   21.2   0.0    0.00063   19.7   0.0    1.6  2  APH             Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.029   13.2   0.0      0.054   12.3   0.0    1.4  1  Pkinase_fungal  Fungal protein kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.0   0.00039       1.8       1      20 [.      71      90 ..      71      96 .. 0.88
   2 !  134.1   0.0   1.2e-42   5.5e-39      22     264 .]     127     438 ..     115     438 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.00039
                EEEEEEEEEESSEEEEEEEE CS
     Pkinase  1 yekleklGeGsfGkVykave 20
                y+ +ek+GeG+f++Vyka +
  EPX72394.1 71 YKLMEKIGEGTFSSVYKAED 90
                7789*************975 PP

  == domain 2  score: 134.1 bits;  conditional E-value: 1.2e-42
                 TTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS.CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHHHHHHHHHHHHHHHHHHHTTE CS
     Pkinase  22 etgkivAvKkikkekakkkkekkvlrEikilkklk.hpnivrlyevfeekdelylvleyveggeladllerkgslseeeakkiakqilegleylHskgi 119
                 ++ k vA+Kki   +       ++l+E++il  l+  + i  l+ +++++d+++l+l y +++++ +++++   +s +e++ +++ ++++l  + ++++
  EPX72394.1 127 RKPKFVAIKKIYATSSP----MRILNELEILYLLRgIDTIAPLITALRNEDQVLLILPYYQHTDFRQFYSN---FSYKEMSAYFRCLFSALTACEAMQV 218
                 56688999999988655....479*********************************************95...************************* PP

                 E-SS-SGGGEEEE.TTTEEEE-SGTTSEESSSSCS....................................BCTTTSCGGGS-HHHHTTSCB.SHHHHH CS
     Pkinase 120 iHrDlKpeNiLid.ekgelKitDFGlakelesssk....................................ltsfvgtseYlAPEvlkeney.skkvDv 180
                 +HrD+Kp+N+L++ e+++  ++DFGla++ +   +                                      ++ gt+ ++APEvl + ++ ++k+D+
  EPX72394.1 219 MHRDIKPSNFLFNvERKHGVLVDFGLAEHCSLPVPkncpcassdtanlaresykdyepalgyvkndtrpskRANRAGTRGFRAPEVLLKCPVqTTKIDI 317
                 *************99999************99988899********************************9999*************665555****** PP

                 HHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH....HHHTTS............................................. CS
     Pkinase 181 WslGvilyelltgkppfsgekgkekvekeldqlekilkilgetke.klpeasei............................................. 233
                 Ws+Gvil+++lt++ p+ ++k+      ++d l++i+ i+g++++ +++    +                                             
  EPX72394.1 318 WSAGVILLSFLTKRFPMFNSKD------DVDALMEIACIFGKNEMrQVAA---Lhgcafetnvttltekrvnfrklilwascgsasiykeklmhkpsie 407
                 *****************95555......5566666666666422202222...12346666667777778899999**********************9 PP

                 -HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 234 seeakdllkkllkkdpkkRltaeellqhpyl 264
                 ++ ++d+l+++l+ d +kR+ta e+++h++l
  EPX72394.1 408 ESVCLDFLERCLELDCNKRITACEAMAHDFL 438
                 99**************************996 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.0   6.4e-10   2.9e-06       5     152 ..      75     247 ..      71     255 .. 0.76
   2 !    8.2   0.0    0.0003       1.4     157     200 ..     285     329 ..     278     379 .. 0.81
   3 ?   -1.0   0.1      0.19   8.7e+02     218     252 ..     395     429 ..     392     435 .. 0.84

  Alignments for each domain:
  == domain 1  score: 26.8 bits;  conditional E-value: 6.4e-10
                  EEEEEESSEEEEEEEEET...............................TTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS.-BTTB--EEEEE CS
  Pkinase_Tyr   5 kklGeGafGkVvegtlkg...............................ekekkevkVavKtlkeeateeekeelleeakimkkl.khpnivkllgvc 70 
                  +k+GeG+f++V++++  +                                 ++k   Va+K++ ++++     ++l+e++i+  l   + i  l+ + 
   EPX72394.1  75 EKIGEGTFSSVYKAEDLKyydyindwdidskgltnqptlegssnegaisPIKRKPKFVAIKKIYATSS---PMRILNELEILYLLrGIDTIAPLITAL 169
                  55566666666655544445555555555566665555555555455444455667799999944444...569***********88999******** PP

                  ESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE.TTEEEE-STTTHEE CS
  Pkinase_Tyr  71 tkeepllivteyvkgGdLlkfLrkkekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse.nkvvkisDfGLard 152
                   +e+++l+++ y ++ d+++f  +     +++k++  +   + +++   e+++++Hrd+   N L +  +k+  + DfGLa++
   EPX72394.1 170 RNEDQVLLILPYYQHTDFRQFYSN-----FSYKEMSAYFRCLFSALTACEAMQVMHRDIKPSNFLFNVeRKHGVLVDFGLAEH 247
                  ********************9766.....6888888888888899999999**************99614567789****986 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.0003
                  SEEEETTSSTSGGGGS-HHHHHHSE.EEHHHHHHHHHHHHHHHHT CS
  Pkinase_Tyr 157 deyvkkeeaklpvkWmapEslkekk.ftsksDvWsfGvllwEift 200
                   + +k+ ++     + apE+l ++   t+k D+Ws Gv+l   +t
   EPX72394.1 285 TRPSKRANRAGTRGFRAPEVLLKCPvQTTKIDIWSAGVILLSFLT 329
                  4456666677777899****988864899**********987776 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 0.19
                  HHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--H CS
  Pkinase_Tyr 218 lkegkrlekpekcpeelyelmkkcweedpeeRptf 252
                  + ++k ++kp+  ++   +++++c+e d ++R t 
   EPX72394.1 395 IYKEKLMHKPSIEESVCLDFLERCLELDCNKRITA 429
                  667788999999999999**************986 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.64   2.9e+03      26      69 ..     136     178 ..     133     189 .. 0.78
   2 !   19.7   0.0   1.4e-07   0.00063     146     196 ..     197     245 ..     164     247 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.64
                 EEE-TTS-HHHHHHHHHHHHHHHHTT-B--B-CTTBS-EEETTE CS
         APH  26 rrnpparaaeeirrevallrlLakagvpvPevlagdtddeeigl 69 
                 ++++++ ++ +i +e+++l lL++ +  +P + a+++ d+++++
  EPX72394.1 136 KIYATS-SPMRILNELEILYLLRGIDTIAPLITALRNEDQVLLI 178
                 788888.9999999*****9999888878888888877776654 PP

  == domain 2  score: 19.7 bits;  conditional E-value: 1.4e-07
                 HHHHHHHHHHHHHH--SSS-EEEE-SS-SGGGEEEC...TTEEEEE---TT- CS
         APH 146 eeleeqvlaalaallpgelptvllHgDlhpgNllvd.pddgrvtGviDfeda 196
                  e+ +   ++l   l + ++++++H+D++p N+l++ ++++ v  ++Df++a
  EPX72394.1 197 KEMSA-YFRCLFSALTACEAMQVMHRDIKPSNFLFNvERKHGV--LVDFGLA 245
                 45555.66777777777899*****************999999..*****98 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   1.2e-05     0.054     320     387 ..     214     306 ..     195     320 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.2e-05
  Pkinase_fungal 320 rsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgare.................................rtGTleFm 381
                     +      +++HrDi   N l++     ++++g+L+D+ la ++s +  ++ ++                                  r GT+ F 
      EPX72394.1 214 E----AMQVMHRDIKPSNFLFN----VERKHGVLVDFGLAEHCSLPVPKNCPCAssdtanlaresykdyepalgyvkndtrpskranRAGTRGFR 300
                     4....4569*************....66899*************976666443355666777777788888888888888888888899999999 PP

  Pkinase_fungal 382 aievlk 387
                     a evl 
      EPX72394.1 301 APEVLL 306
                     999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (510 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       781  (0.0435607); expected 358.6 (0.02)
Passed bias filter:                      500  (0.0278878); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 3581.85
//
Query:       EPX72395.1  [L=148]
Description: 60S ribosomal protein L27/L28 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.6e-20   73.4   0.0    3.5e-20   73.0   0.0    1.2  1  Ribosomal_L27A  Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27
  ------ inclusion threshold ------
        0.1   11.5   0.0       0.12   11.3   0.0    1.1  1  Lyase_8_N       Polysaccharide lyase family 8, N terminal alp


Domain annotation for each model (and alignments):
>> Ribosomal_L27A  Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.0   0.0   3.9e-24   3.5e-20       3     127 ..      28     145 ..      26     146 .. 0.85

  Alignments for each domain:
  == domain 1  score: 73.0 bits;  conditional E-value: 3.9e-24
                     GGTSSTTTTTTTTT-..S--........S--.........---GGG..---...EEEEHHHHHHTTTTGTTS--.....----EEEGGGTTTTSS CS
  Ribosomal_L27A   3 ktgGrGhkGqkkrsg..vkk.kpg.feGGqmplyrrlpkrGfknskfkkey...kvvnlkdLdelideerlela.....deaeeidleelaeagl 85 
                     ++gGrG +G +++ +   +k +pg f  G++         G+++ + +++    + vnl++L++l+++e++e+      + a++i++ +      
      EPX72395.1  28 HPGGRGLAGGQHHLRthLDKyHPGyF--GKV---------GMRRFHLQRNPlwrPSVNLDRLWTLVPNETREKYlgkntEVAPVINVVQS----- 106
                     78**********999889999***99..***.........88843433444577***************999444666555788888888..... PP

                     S....SE.EEE--S---.-.-EEEESEE-HHHHHHHHHTT-EEE CS
  Ribosomal_L27A  86 ikkkdgv.Kvlgkgeltkk.lkvkaskfSkkAkekIeaaGGkve 127
                          g+ Kvlgkg+l++  ++v+a+++S++A+ekI++aGG ve
      EPX72395.1 107 -----GYaKVLGKGRLPETpVIVQARYVSRRAEEKIKQAGGVVE 145
                     .....***********9855*********************998 PP

>> Lyase_8_N  Polysaccharide lyase family 8, N terminal alpha-helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   1.3e-05      0.12     248     299 ..      89     143 ..      73     148 .] 0.82

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 1.3e-05
                 TT---HHHHCHHHHHHHHTTGGGEETTEE-GG...GSGGGGGSCCCTCHHHHHHH CS
   Lyase_8_N 248 kwaisdeklqilyklveksylplivkgemmdm...vrGRsiSRaneqnkeagael 299
                 k+  ++++++ ++++v+ +y++++ kg++ ++   v+ R +SR +e++ + +  +
  EPX72395.1  89 KYLGKNTEVAPVINVVQSGYAKVLGKGRLPETpviVQARYVSRRAEEKIKQAGGV 143
                 56667899999******************9866669********99987766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       261  (0.0145574); expected 358.6 (0.02)
Passed bias filter:                      237  (0.0132188); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1127.90
//
Query:       EPX72396.1  [L=136]
Description: S-(hydroxymethyl)glutathione synthase activity [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.8e-09   36.8   2.1    6.3e-09   36.1   2.1    1.4  1  GFA             Glutathione-dependent formaldehyde-activating
  ------ inclusion threshold ------
      0.077   12.9   6.0        3.5    7.6   0.0    2.8  2  Zn_ribbon_SprT  SprT-like zinc ribbon domain


Domain annotation for each model (and alignments):
>> GFA  Glutathione-dependent formaldehyde-activating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.1   2.1     7e-13   6.3e-09       2      72 ..      26      89 ..      25     110 .. 0.71

  Alignments for each domain:
  == domain 1  score: 36.1 bits;  conditional E-value: 7e-13
         GFA  2 lChCsdCrkasgsaftanavvkaealelleg.elkeykktadsgnkvtrsfCpeCgsplyseesaapevviv 72
                +ChC++Crk+  ++f+a   + a++++l  + ++++y+    s+n ++rsfC+ Cg++l +  + ++ + +v
  EPX72396.1 26 ICHCDTCRKWCSAPFMA---FAAQDINLEPKdKVSQYA----SSNIAKRSFCKICGTTLSFFYDDMK-QKFV 89
                7**********866655...445556654445999999....79**************987544444.3444 PP

>> Zn_ribbon_SprT  SprT-like zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   3.0    0.0027        24       2      27 ..       3      29 ..       2      34 .. 0.79
   2 ?    7.6   0.0   0.00039       3.5      21      37 ..      66      80 ..      58      80 .. 0.78

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.0027
  Zn_ribbon_SprT  2 kyvYrCtgCgreythhlsirrhn.....YrC 27
                     y  +C  C+    ++ s++ ++      +C
      EPX72396.1  3 EYHGTC-LCK---AVQVSVQVEKpelgiCHC 29
                    5999**.***...********9988855555 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.00039
  Zn_ribbon_SprT 21 rrhnYrCrrCkgtLrgk 37
                    +r    C++C+ tL+++
      EPX72396.1 66 KR--SFCKICGTTLSFF 80
                    44..55********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       695  (0.038764); expected 358.6 (0.02)
Passed bias filter:                      273  (0.0152267); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.28s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 874.47
//
Query:       EPX72397.1  [L=105]
Description: helper-TIM [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.1e-11   42.7  13.0      1e-10   41.9  13.0    1.5  1  zf-CHY          CHY zinc finger
     0.0057   16.9  13.0      0.038   14.2   3.2    2.2  2  IBR             IBR domain, a half RING-finger domain
  ------ inclusion threshold ------
      0.011   15.5   1.7      0.011   15.5   1.7    3.3  3  zf-RING_4       RING/Ubox like zinc-binding domain
       0.04   13.8   3.1       0.04   13.8   3.1    2.7  2  zf-C3HC4_3      Zinc finger, C3HC4 type (RING finger)
       0.12   12.4  16.4         56    3.9  16.4    3.0  1  DZR             Double zinc ribbon


Domain annotation for each model (and alignments):
>> zf-CHY  CHY zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.9  13.0   2.9e-14     1e-10       1      73 [.      18      89 ..      18     103 .. 0.82

  Alignments for each domain:
  == domain 1  score: 41.9 bits;  conditional E-value: 2.9e-14
      zf-CHY  1 CkHykra..vvairapcCkklyaCreCHeeledhelerlevkevlcllCeteqekavlCkkCkk..efaey....fCpiCk 73
                C+Hy+++  +va+r++ Ckk+yaC  CH++le+h++  ++++              vlC++Ck+  + +ey    +Cp+C+
  EPX72397.1 18 CQHYHSEldIVALRCHECKKFYACFACHNTLESHPFGPWKATPN---------MLPVLCGACKHsmTKDEYqqasSCPNCR 89
                *******99*****************************998843.........3567788887744445556665677775 PP

>> IBR  IBR domain, a half RING-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   2.3   0.00074       2.7      27      56 ..      19      48 ..      10      54 .. 0.65
   2 !   14.2   3.2   1.1e-05     0.038      21      54 ..      67      98 ..      57     104 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00074
         IBR 27 eaiieksegcks.........vtCskCgfef.CfnCkkew 56
                +          +         ++C++C++ + Cf C++  
  EPX72397.1 19 Q----------HyhseldivaLRCHECKKFYaCFACHNTL 48
                3..........233334444468****95555****9765 PP

  == domain 2  score: 14.2 bits;  conditional E-value: 1.1e-05
         IBR 21 CprpdCeaiieksegcksvtCskCgfefCfnCkk 54
                C    C++ + k+e ++ ++C++C+  f  nC+ 
  EPX72397.1 67 CG--ACKHSMTKDEYQQASSCPNCRRPFNPNCRT 98
                65..7**********88889************95 PP

>> zf-RING_4  RING/Ubox like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   1.5    0.0097        35      22      47 ..      15      39 ..      14      40 .. 0.77
   2 ?   15.5   1.7     3e-06     0.011      24      48 .]      66      93 ..      65      93 .. 0.79
   3 ?   -1.4   0.2       0.6   2.2e+03      41      45 ..      94      98 ..      94     100 .. 0.86

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.0097
   zf-RING_4 22 yqiClfCyhrileeeegrCPaCreeY 47
                y  C+ +++++    + rC +C++ Y
  EPX72397.1 15 YSRCQHYHSELD-IVALRCHECKKFY 39
                677887777665.5699******999 PP

  == domain 2  score: 15.5 bits;  conditional E-value: 3e-06
   zf-RING_4 24 iClfCyhrile...eeegrCPaCreeYk 48
                +C  C h + +   +++  CP+Cr++++
  EPX72397.1 66 LCGACKHSMTKdeyQQASSCPNCRRPFN 93
                5899999999944445899******995 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 0.6
   zf-RING_4 41 PaCre 45
                P+Cr+
  EPX72397.1 94 PNCRT 98
                99*97 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   6.4      0.07   2.5e+02      17      33 ..      32      48 ..      17      55 .. 0.70
   2 ?   13.8   3.1   1.1e-05      0.04      24      47 ..      65      92 ..      59      94 .. 0.92

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.07
                ETTEEEEEE-HHHHHHH CS
  zf-C3HC4_3 17 llpCgHlvlCeeCaekl 33
                + +C+ +++C +C ++l
  EPX72397.1 32 CHECKKFYACFACHNTL 48
                33578888888888877 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 1.1e-05
                EE-HHHHHHHHH....TT-B-TTT--B- CS
  zf-C3HC4_3 24 vlCeeCaekllk....rkkkCpiCrrpi 47
                vlC +C  ++ k    +  +Cp Crrp 
  EPX72397.1 65 VLCGACKHSMTKdeyqQASSCPNCRRPF 92
                69********999**9**********96 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9  16.4     0.016        56      14      43 ..      40      97 ..      16     101 .. 0.60

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.016
         DZR 14 fCseCgtklkavaa............................edrCpsCgekvdpear 43
                 C++C ++l++ +                             +  Cp+C ++ +p++r
  EPX72397.1 40 ACFACHNTLESHPFgpwkatpnmlpvlcgackhsmtkdeyqqASSCPNCRRPFNPNCR 97
                5666666665333366666666663333333333333334556667777777666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       747  (0.0416643); expected 358.6 (0.02)
Passed bias filter:                      252  (0.0140554); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.43
# Mc/sec: 730.12
//
Query:       EPX72398.1  [L=658]
Description: transport complex peripheral subunit Cog6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   5.5e-108  361.8  20.2   6.7e-108  361.6  20.2    1.0  1  COG6          Conserved oligomeric complex COG6
  ------ inclusion threshold ------
      0.014   15.2   0.1       0.21   11.4   0.1    2.8  2  Nsp1_C        Nsp1-like C-terminal region
      0.034   13.9   2.2       0.14   11.9   0.6    2.6  2  DUF1647       Protein of unknown function (DUF1647)
      0.072   13.8   0.7      0.072   13.8   0.7    2.6  3  Occludin_ELL  Occludin homology domain
       0.86    9.9   5.1        0.4   10.9   0.2    2.9  3  Seryl_tRNA_N  Seryl-tRNA synthetase N-terminal domain


Domain annotation for each model (and alignments):
>> COG6  Conserved oligomeric complex COG6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  361.6  20.2  1.9e-111  6.7e-108       1     603 [.      44     632 ..      44     648 .. 0.94

  Alignments for each domain:
  == domain 1  score: 361.6 bits;  conditional E-value: 1.9e-111
        COG6   1 algtlsefytentaeaRrnLrsdiekellkineefleefqpvaeqLkriesdveklnelcdemkkklssakeetsdlleeaeeLkeekkklelkqkllk 99 
                 al++lse+  +n+ e+R +L  +  ++l+ +n+++l+e++ + ++++++++++++ ++++d+  ++++++++   +l ++ +++++ekk++  k k ++
  EPX72398.1  44 ALQQLSERNFKNEKETRDQLPFEAFSDLIWTNGSILHELSILTNHIESMKESFSSFSNSVDSYDSHWNTKSKAAMELYSKYQSFEAEKKHVHDKLKCIE 142
                 699************************************************************************************************ PP

        COG6 100 aflkkFtLseeEeaaLtsgeevddeFFkaLakvkeIhedCkiLLatenqraGle....imeqmskyleaayekLyrwvqkelkslnsednpeissllrk 194
                  f+k+F +s+e++  Lts+++vdd+F+ +L+k+++Ih++ + L++   + + +e    i+++ms++++  y kLyr+v+ elk+    ++ e ++ +++
  EPX72398.1 143 YFEKNFLISDEDLIHLTSQNDVDDRFYLILEKAQSIHDNTNSLFTPVSEFLNYEslegIIKNMSRHIDIGYTKLYRFVELELKNPRVIQTMETNPEIKR 241
                 ********************************************877766664433349**************************************** PP

        COG6 195 alrvLkerpvlFkecldevaeaRskalldeFisaltrggpggsprPielsAhDplRYvGDmLAwvHqaiasErEllesLfkfqegdeiakglqaknkee 293
                 a++ L + ++  +++++ ++++R++ l  ++++alt+g   +s++PielsA D +R+vGD+LAw Hq+i++E El++sL+       + +++  ++  +
  EPX72398.1 242 AITKLLSEHTTINKTINLITQVRQQNLHSAYVTALTKGDALSSSKPIELSAPDTMRFVGDLLAWTHQTIVNEIELIDSLLA------ARRQQVRSHPVS 334
                 ********************************************************************************3......333444566677 PP

        COG6 294 lesl.kkeeeeeefdeelnklldrilegvcrplkvRvEqvlqseedlitlykianlleFYsstfskllgsdssLvetleeleklakkkffsllkdklak 391
                 +++  +      + +e+  +lld +l g+crpl +R ++ +    d+i ly++++ll FY++ fsk++++++ ++++l+++e+++ +++ + + d+l +
  EPX72398.1 335 PWDTpS------AVQEQSINLLDGSLYGICRPLLSRAQTSVLDLADTIRLYNLIELLGFYQEAFSKIVHENCIILKILKTIEDFTYQRMKTVIDDELYA 427
                 777743......45555567******************************************************************************* PP

        COG6 392 llpelpp..sdLspPewlsealskllelletyesslaseaserekdfeevlsalldpllqacersakklekkdk.aifliNcldliqstLspysfaskk 487
                 ++++lp+  +dL+pP++++ +l++ +++++  ++sl+s +  +e++f +++s+l++++ q c ++ k+  + +k  i+l+N+ld++ + L++y+f++  
  EPX72398.1 428 ISSSLPKvtDDLLPPDFVTSFLRDSNSVFKIRNTSLSS-SGVDEEQFITIFSDLFEKVFQICLTMVKDQLSFHKyVIYLLNILDSCLTYLRRYKFLAPI 525
                 **888854499**************************9.8999***********************88886666489********************** PP

        COG6 488 veelqaqieelvdtLveeqaselleksgLsdllnllnmiqpeedestyeplsenplmepeslkealqkLdefLpsaltdalenlekLqspklrseitee 586
                  e+ +++ +e+v++Lve+ +++ l++sgLsd++n +++ +++          e+++++++ + e  +++++f++ + ++++  l+ L+ p + +++ ++
  EPX72398.1 526 RESFENKENEYVEKLVELIYQTYLTESGLSDIINFIKDKDDK---------EELNAISSAPWDEHVSRFNSFVTITISEIIADLQLLTAPLIMEQVMKR 615
                 ************************************999853.........6899******************************************** PP

        COG6 587 aaeklveaYekleeail 603
                 +a+++++ ++++ + ++
  EPX72398.1 616 TAKTFIQSFQQFTQRVQ 632
                 ************99986 PP

>> Nsp1_C  Nsp1-like C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   5.8e-05      0.21      28      84 ..      86     142 ..      75     149 .. 0.93
   2 ?   -0.5   0.0      0.28     1e+03       8      30 ..     186     208 ..     179     218 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 5.8e-05
      Nsp1_C  28 tteLeeqekeFeeqakkvneWDrvLvengekIskLysevleaeqeqnkidqeLeyie 84 
                 t+ +e+ ++ F++ ++ v + D +    ++   +Lys+  + e+e++++ ++L+ ie
  EPX72398.1  86 TNHIESMKESFSSFSNSVDSYDSHWNTKSKAAMELYSKYQSFEAEKKHVHDKLKCIE 142
                 6788999***********************************************998 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.28
      Nsp1_C   8 iapsaaslknktldelinkWtte 30 
                  +p+++ l++++l+ +i++ +  
  EPX72398.1 186 FTPVSEFLNYESLEGIIKNMSRH 208
                 5566755**********988765 PP

>> DUF1647  Protein of unknown function (DUF1647)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.22   7.8e+02      80     110 ..      65      96 ..      45     113 .. 0.77
   2 ?   11.9   0.6   3.9e-05      0.14      56     134 ..     465     544 ..     432     549 .. 0.79

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.22
     DUF1647  80 iksirkyypkkklilysldlseeeieklk.kd 110
                 ++++  +  ++  il++l++ +++ie++k ++
  EPX72398.1  65 FEAFSDLIWTNGSILHELSILTNHIESMKeSF 96 
                 55666777788889999999999999988444 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 3.9e-05
     DUF1647  56 ikneedvvFvsatsddhlkeakksiksirkyypkkklilysldlseeeieklkkdknle.vrkFntskYPeyvknlkeyr 134
                 ++  ++  F++ +sd + k ++  +++++     +k+++y l++ ++ ++ l++ k l  +r+   +k  eyv++l+e  
  EPX72398.1 465 SSGVDEEQFITIFSDLFEKVFQICLTMVKDQLSFHKYVIYLLNILDSCLTYLRRYKFLApIRESFENKENEYVEKLVELI 544
                 34456668********************************************9666554377655556678888887765 PP

>> Occludin_ELL  Occludin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.1       4.6   1.6e+04      39      53 ..      39      53 ..      20      63 .. 0.55
   2 ?   13.8   0.7     2e-05     0.072      26      83 ..      84     141 ..      78     150 .. 0.91
   3 ?   -2.2   0.1       1.9     7e+03      50      71 ..     234     255 ..     191     270 .. 0.59

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 4.6
  Occludin_ELL 39 seLerelkelkegsk 53
                   +Le+ l++l+e++ 
    EPX72398.1 39 PQLESALQQLSERNF 53
                  455555555554443 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 2e-05
  Occludin_ELL  26 elhaeleevskkfseLerelkelkegskeykkieeeilqeykklkkdpeyqekkkrce 83 
                    l +++e++++ fs +++ +++++ + ++ +k++ e++++y++++ ++++ ++k +c 
    EPX72398.1  84 ILTNHIESMKESFSSFSNSVDSYDSHWNTKSKAAMELYSKYQSFEAEKKHVHDKLKCI 141
                   58899*************************************************9995 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 1.9
  Occludin_ELL  50 egskeykkieeeilqeykklkk 71 
                   e++ e+k+++ ++l+e   ++k
    EPX72398.1 234 ETNPEIKRAITKLLSEHTTINK 255
                   3333566666666666555555 PP

>> Seryl_tRNA_N  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.2   0.00011       0.4      34      87 ..       3      56 ..       1      64 [. 0.78
   2 ?   -1.7   0.1      0.94   3.4e+03      45      82 ..     103     137 ..      81     146 .. 0.44
   3 ?   -1.3   0.1      0.69   2.5e+03      31      61 ..     229     259 ..     216     271 .. 0.66

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00011
                  HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCTTS-TCCCCCCCHHHHHHHHHHH CS
  Seryl_tRNA_N 34 ldekrrelqveleelqaerNelskeIgkakkkkedaeeliaevkelkeelkale 87
                  + ++r   + + +el + rN +sk+I++++  +    +l    ++l+e+  + e
    EPX72398.1  3 VKTERPDYRLKRDELLSFRNLISKSIAQLSSINYVNPQLESALQQLSERNFKNE 56
                  6678888999********************999777777777777776654444 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.94
                   HHHHHHHHHHHHHHCCCCCCTTS-TCCCCCCCHHHHHH CS
  Seryl_tRNA_N  45 leelqaerNelskeIgkakkkkedaeeliaevkelkee 82 
                   +++  +  N+ sk+  ++  k    ++  ae k + ++
    EPX72398.1 103 VDSYDSHWNTKSKAAMELYSK---YQSFEAEKKHVHDK 137
                   333333334444433333332...23333333333333 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 0.69
                   HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC CS
  Seryl_tRNA_N  31 lleldekrrelqveleelqaerNelskeIgk 61 
                   +++  e   e++ ++ +l +e+ +++k+I  
    EPX72398.1 229 VIQTMETNPEIKRAITKLLSEHTTINKTINL 259
                   5555556666666666666666666666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (658 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1287  (0.0717831); expected 358.6 (0.02)
Passed bias filter:                      562  (0.0313459); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.66u 0.32s 00:00:00.98 Elapsed: 00:00:00.47
# Mc/sec: 4215.40
//
Query:       EPX72399.1  [L=486]
Description: ATP-dependent RNA helicase Ste13 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.1e-42  143.6   0.0    7.5e-42  143.1   0.0    1.3  1  DEAD        DEAD/DEAH box helicase
    4.2e-27   94.7   0.9    3.2e-26   91.9   0.4    2.2  2  Helicase_C  Helicase conserved C-terminal domain
    0.00044   20.3   0.0    0.00098   19.2   0.0    1.6  1  ResIII      Type III restriction enzyme, res subunit
  ------ inclusion threshold ------
       0.12   11.6   0.0       0.23   10.8   0.0    1.3  1  NAGidase    beta-N-acetylglucosaminidase
       0.15   12.1   0.7       0.33   10.9   0.2    1.7  2  Flavi_DEAD  Flavivirus DEAD domain


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.1   0.0   2.1e-45   7.5e-42       2     170 ..      68     227 ..      67     233 .. 0.95

  Alignments for each domain:
  == domain 1  score: 143.1 bits;  conditional E-value: 2.1e-45
                 HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCSE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   2 diQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvdi 100
                 +iQ+e+ip++l+g+d+l++a+ G+GKT+af+ip l++v   ++k++ ++li++PtreLa qt + +k+++k+++ +v++++gg++ rd++ +l+  v+i
  EPX72399.1  68 PIQEESIPIALSGRDILARAKNGTGKTAAFVIPSLEKVD--TKKNKIQTLILVPTRELALQTSQVCKNLGKHMNAKVMVTTGGTTLRDDILRLNDPVHI 164
                 8*************************************4..599*************************************************555*** PP

                 EEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 101 vvgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlp 170
                 vvgtpgr++dl  +g  ++s++ ++V+DEad+ll+ +f + i+++l+ +       +++rq+ + SAT+p
  EPX72399.1 165 VVGTPGRVLDLAGKGVADFSECMTFVMDEADKLLSPEFTPIIEQLLSYF-------PKNRQISLYSATFP 227
                 ************99999********************************.......67899*******98 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.17   6.2e+02      11      51 ..     106     150 ..      96     163 .. 0.68
   2 !   91.9   0.4   8.9e-30   3.2e-26       4     111 .]     269     375 ..     266     375 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.17
                 HHTTTTSEEEEEESSHH.HHHH...HHHHHHHTTSTEEEESTTST CS
  Helicase_C  11 kleeeggkilifvntid.rlek...vklllekkgikvavlhgelp 51 
                 ++++++ ++li v+t++  l+    +k l ++ + kv v +g ++
  EPX72399.1 106 DTKKNKIQTLILVPTRElALQTsqvCKNLGKHMNAKVMVTTGGTT 150
                 567888899********7443333455554444777777777655 PP

  == domain 2  score: 91.9 bits;  conditional E-value: 8.9e-30
                 HHHHHHHHHTTTTSEEEEEESSHHHHHHHHHHHHHT...TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHH CS
  Helicase_C   4 eallellkleeeggkilifvntidrlekvklllekk...gikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvts 99 
                 ++l  l+ ++ + ++++if+n+++r+   +ll +k    g+++ + h+++ q++r++++++f++g ++ L+++d + rGidi+ vn+V+nfd+p+n ++
  EPX72399.1 269 HCLNTLF-SKLQINQSIIFCNSTNRV---ELLAKKItelGYSCFYSHAKMLQSHRNRVFHNFRNGVCRNLVCSDLLTRGIDIQAVNVVVNFDFPKNAET 363
                 4455555.889999************...55544445579*********************************************************** PP

                 HHHHHTTSSSTT CS
  Helicase_C 100 yiqriGRtgRag 111
                 y +riGR gR+g
  EPX72399.1 364 YLHRIGRSGRFG 375
                 **********86 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   2.7e-07   0.00098      27     169 ..      83     226 ..      63     228 .. 0.78

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 2.7e-07
                 EEEEESTTSTHHHHH.HHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG......GEEEESSS-B--.......-SEEEEEHHHHHHTH.... CS
      ResIII  27 glikmaTGtGKTlva.aklierllkkgkeekflflvprkslleqtleefkkflseayke..igkkvsgdkkkakekdstnkkilvttiqsldadseeee 122
                 +l  +  GtGKT    +   e++ +k+++ ++l+lvp+++l  qt +  k++ +  +++  +++  +  ++++  + ++  +i+v t  ++        
  EPX72399.1  83 ILARAKNGTGKTAAFvIPSLEKVDTKKNKIQTLILVPTRELALQTSQVCKNLGKHMNAKvmVTTGGTTLRDDI-LRLNDPVHIVVGTPGRVLDLA---- 176
                 5667788*****998788888888888888*****************99999999988766333333333333.567999999999999998888.... PP

                 ....HHHTTT-SEEEEETGGGTTS.T...TTHHHHHT---SEEEEE.ESS- CS
      ResIII 123 eeseellrdrfdviiiDEaHrlgakk...swreilekfkeavllgl.TATp 169
                   +  ++ ++   +++DEa +l + +    ++++l +f+++ ++ l +AT+
  EPX72399.1 177 -GKGVADFSECMTFVMDEADKLLSPEftpIIEQLLSYFPKNRQISLySATF 226
                 .66677777777999999999999634446777799998888887767876 PP

>> NAGidase  beta-N-acetylglucosaminidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   6.3e-05      0.23     124     184 ..      93     153 ..      74     159 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 6.3e-05
                 HHHHHHHHHHHHHHTTSSS.-EEEEE-SS-BS-TT-HHHHHHHHHS-TTSEEEE-BSSSSS CS
    NAGidase 124 aqaellnkvqeelkekkkdvkplivvpteYaksaeseylkelgkkldkevevlwTGeavvs 184
                 ++a+++    e++++kk+++++li+vpt+    ++s+  k+lgk+++++v v   G++  +
  EPX72399.1  93 KTAAFVIPSLEKVDTKKNKIQTLILVPTRELALQTSQVCKNLGKHMNAKVMVTTGGTTLRD 153
                 44555555667888999999******************************99877766545 PP

>> Flavi_DEAD  Flavivirus DEAD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.2   9.2e-05      0.33      12      57 ..      88     135 ..      80     152 .. 0.72
   2 ?   -2.7   0.0       1.5   5.3e+03      84     103 ..     230     249 ..     224     251 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 9.2e-05
                 -TTS-TTTT.HHHHHHH.HHHHTT--EEEEESSHHHHHHHHHHTTTS- CS
  Flavi_DEAD  12 hPGaGktrk.vlpelvk.eaierrlrtlvLaPtrvvlaemeealkgle 57 
                 + G+Gkt   v+p+l k ++ +++++tl+L+Ptr  +   ++  k+l 
  EPX72399.1  88 KNGTGKTAAfVIPSLEKvDTKKNKIQTLILVPTRELALQTSQVCKNLG 135
                 679****9824666655234566899********88877776666655 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1.5
                 HHHHHHT------SEEEEET CS
  Flavi_DEAD  84 tkrllspvrkknyeliimDe 103
                 +k  + ++ +k ye+ +mDe
  EPX72399.1 230 VKAFMDKHLNKPYEINLMDE 249
                 5566777888899*****99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (486 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       594  (0.0331307); expected 358.6 (0.02)
Passed bias filter:                      484  (0.0269954); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 3384.92
//
Query:       EPX72400.1  [L=1099]
Description: nrap [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-47  161.8   0.0    2.8e-47  160.8   0.0    1.4  1  Nrap_D4   Nrap protein nucleotidyltransferase domain 4
    1.4e-43  148.4   1.8    2.4e-43  147.7   1.8    1.4  1  Nrap_D5   Nrap protein PAP/OAS1-like domain 5
    2.1e-39  135.0   0.6    5.3e-39  133.7   0.6    1.7  1  Nrap      Nrap protein domain 1
    2.5e-39  134.9   0.0    6.9e-39  133.5   0.0    1.8  1  Nrap_D3   Nrap protein domain 3
    1.9e-32  112.1   0.8      9e-30  103.5   0.1    2.4  2  Nrap_D2   Nrap protein PAP/OAS-like domain
    1.8e-27   96.2   0.7    4.1e-27   95.0   0.1    1.9  2  Nrap_D6   Nrap protein domain 6
  ------ inclusion threshold ------
      0.078   12.9   0.1        1.7    8.6   0.0    2.7  3  DUF1806   Protein of unknown function (DUF1806)


Domain annotation for each model (and alignments):
>> Nrap_D4  Nrap protein nucleotidyltransferase domain 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  160.8   0.0   1.1e-50   2.8e-47      14     213 .]     633     817 ..     623     817 .. 0.91

  Alignments for each domain:
  == domain 1  score: 160.8 bits;  conditional E-value: 1.1e-50
                 GGS-TT--HHHHHHHHHHHHHHHHHHT-.--SS-EEEEEE-SGGGGT--SS---TT.......-.....TTSTEEEEEEE---TTS-SSHHHHHHHHHH CS
     Nrap_D4  14 seqsstseeafssvikaFdeLekdlrsLedLPLsirsvqpaspalRytsvfppvpvklsppkaaksskeylepidvvlqfEsSgkWPddleAiqkvKaA 112
                  + ++++ +++ +v +a++e +k+l++  d+PLsi++v+pa++alRy+  ++p              +   +pi++v+qfEsS++WPd+le iq++K+A
  EPX72400.1 633 LSPNVDTYNDYVPVTEAYNEAVKTLHNFSDIPLSISEVLPADEALRYSCSRVPGY-----------DTFATTPINIVFQFESSSRWPDELEGIQRAKIA 720
                 4567788899*******************************************88...........234789*************************** PP

                 HHHHHHHHH.HH-TTS.EEEEEE-------...EEEEEE-TTS-EEEEEEE-TTHHHHHHHHH...HHS-TTHHHHHHHHHHHHHHHTTHHHHHHHHHH CS
     Nrap_D4 113 FllkiaeeLeekksei.karvgldnssekianqayLdvlkesgfaFrlrilherEltllerqlkdkglakkereeaaealaklerrfvhlprhtsaiag 210
                 Fllkiae +e   +++ ka vgl+n+++   n+++L+vl+++gf+Fr ri ++rE++l++  l+     + +r++ +e l+++++ f   p+ht ai++
  EPX72400.1 721 FLLKIAEYME-GLENVeKAAVGLENTDHPALNCCFLQVLYTNGFTFRYRIRNDREAALWKT-LER---NPATRQKGQEGLYTYDHIFKFIPQHTLAIQA 814
                 **********.788888******************************************97.523...33456777779******************** PP

                 HHT CS
     Nrap_D4 211 lct 213
                 +c+
  EPX72400.1 815 ICQ 817
                 *97 PP

>> Nrap_D5  Nrap protein PAP/OAS1-like domain 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.7   1.8   9.6e-47   2.4e-43       2     161 ..     820     972 ..     819     973 .. 0.95

  Alignments for each domain:
  == domain 1  score: 147.7 bits;  conditional E-value: 9.6e-47
                 TTHHHHHHHHHHHHHHTT-T.TTS-HHHHHHHHHHHHHS-TTS----SHHHHHHHHHHHHHH--TTT--EE----------HHHHHHHHHHHHHHHHH- CS
     Nrap_D5   2 paysptvrLvkrWlashlLleghvseelvELlvakvFlqpapysvPssaetGFlrvLelLarwdWkeepLivdlnesekltaeeikeietrfealrksd 100
                  +ys++vrL+k+W+ sh+L  +hvs+e++ELl+a+v+++++ +++++s et+++r+L++La+wdW+ epL++d+   ++l ++ ++++ +++e lrk+d
  EPX72400.1 820 RSYSMAVRLAKHWFYSHMLT-NHVSDEVIELLIASVYVNSNAWQATASGETALCRMLHFLANWDWRFEPLVIDFR--QRLPTNIQSQAAEKLEILRKQD 915
                 79****************88.******************************************************..88******************** PP

                 TTSSS----EE-SS-TTS-TTT--HH...HHHHHHHHHHHHHHHHHHH....-SSHHHHTS CS
     Nrap_D5 101 pamnktalfvatekDkegtlwtkekpskvvaaRltaLAkaalelleekevsekldvkslFt 161
                  +mn+++++++ ++D e+++   ++p+k++a+R+t LA+aa++ l +       ++kslF+
  EPX72400.1 916 VSMNRNPFYIVVDYDLESKHVGWKTPTKMIANRITVLARAAVSELMKP----VTNFKSLFN 972
                 ******************9977799*****************999988....467788886 PP

>> Nrap  Nrap protein domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.7   0.6   2.1e-42   5.3e-39       2     149 ..     170     303 ..     169     306 .. 0.91

  Alignments for each domain:
  == domain 1  score: 133.7 bits;  conditional E-value: 2.1e-42
                 EEEEE--GGG--TTTTSTTHHHHHHHHHHHHHHHHHHHHHHHTGTEEEEEEEGGG-TT-EEEEEEE---.----GGGTEEEEEEEE--TTSS-GGGGST CS
        Nrap   2 DlavemPkslfqekDylnlRyfyKRalYLavlaaelskskkkedlvkvsfeylngdelkpiLvirpkkeaekkfskskfririipvapsdlfklsklsp 100
                 Dl+vemP++lf++kD+ln Ryf+KR ++La+la+e+ ++ +  + v+v++ +l+gd ++pi++i+p   +e+++++++f+i iip++   +f++skl+ 
  EPX72400.1 170 DLLVEMPQTLFTPKDFLNNRYFHKRQYFLACLAKEIVQKLG--SDVEVKYVALHGDVRRPIIKIKPV--NEDSSARKRFSIDIIPCVAP-FFPTSKLLA 263
                 9***********************************99655..569999999**************9..55666899*********999.********* PP

                 TS--S----........---------HHHHHHHHHTT-HHHHHHHHHHH CS
        Nrap 101 sknnirvetlkeekesseeeetlppTPlYNssilsdllleehlkllhka 149
                 +kn++r     +     +++e+l+pTP+YN+sil+d +   + +l++k 
  EPX72400.1 264 HKNCLR-----N----LSADEELLPTPFYNASILEDQSTLYYRDLVKKY 303
                 ******.....2....345678*****************9999998875 PP

>> Nrap_D3  Nrap protein domain 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.5   0.0   2.7e-42   6.9e-39       2     159 ..     456     611 ..     455     612 .. 0.90

  Alignments for each domain:
  == domain 1  score: 133.5 bits;  conditional E-value: 2.7e-42
                 HHHSSEEEEEE--HHH-SS---HHHHHHHSSHHHHHHHHHHHHHHHHHGGGEEEEEEEEET-.EE-TTSSS-BSSS-SEEEEEEEE-TTTTT-SEEEEE CS
     Nrap_D3   2 llkfDlvlriklseekakekkeekekldlseaeeallskvssvlkkaLgdRvkliaikleee.ewsiekkkskeakeskleiglllnpenaerlvdkGP 99 
                 +l+fD+  +i+++   ++++++ ++ +dl+++ ++++s++ ++l+ +L+dRv+ + ++++e  + +++ +  +++ +sk+++gllln+e + rlvd+GP
  EPX72400.1 456 ILEFDVSGTIPVH--LETTSENYTDLTDLDSKFSYYISQLWNILRIGLNDRVNRLVLSQSEViSSDVK-DLLENSYPSKISFGLLLNSEVSLRLVDVGP 551
                 6799***999999..5667778999***************************9999885533355555.44478899********************** PP

                 E-S--HHHHHHHHHHGGGEEEEE-TTS-EEEEEE----SSS...-HHHHHHHHHHHHHT- CS
     Nrap_D3 100 saedkeeaaeFreFWgekselRrFkDGsIlesvvWeksskserrsiveqIvkyiLkrhlk 159
                 s ed+e++++FreFWgekselR+FkDG+I+esv+We+s+ ser++i+ +I++y+++ h++
  EPX72400.1 552 SLEDSEATTKFREFWGEKSELRKFKDGRIAESVYWESSTPSERSQIPMRIIRYVVDCHIS 611
                 ********************************************************9986 PP

>> Nrap_D2  Nrap protein PAP/OAS-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.5   0.1   3.5e-33     9e-30       1     151 [.     308     450 ..     308     451 .. 0.91
   2 !    7.0   0.1    0.0018       4.7       4      82 ..     824     898 ..     821     935 .. 0.79

  Alignments for each domain:
  == domain 1  score: 103.5 bits;  conditional E-value: 3.5e-33
                 THHHHHHHHHHHHHHTT--SS--TS-S-SHHHHHHHHHHHTSBBSTTS-BSS-TT--HHHHHHHHHHHHHHS--SS-EEEE-------BEEES-.--SS CS
     Nrap_D2   1 afkdAclLlkvWlrqRgfgssirkaggfggfewamllalllqgggkkgrkklskslssyqlfkavlqfLastdltkkpiflgaskseeskkeseeefsk 99 
                 +f +Ac L++vWl+ Rgf s +++  gfg+ ew+++l+ll++ +g  + + ls+ l+++qlfk+vlq+L+s +l+++   ++++k   s    +  + +
  EPX72400.1 308 QFIEACGLGSVWLNMRGFCSGMHQ-YGFGHREWCIMLSLLMSASGLPTGSVLSAYLNATQLFKGVLQVLSSDSLSNSLHKVNHDK---S----PLAIVD 398
                 589****************99999.9************************************************99888884443...2....223333 PP

                 ...--EEETTT--BTTTT--HHHHHHHHHHHHHHHHHHT-SSS--HHHHHT- CS
     Nrap_D2 100 afepvlvdpsgklNllakmtassydlLqqeAketlelLddsssdqFdslFlt 151
                   +p+++d s++lNll+km++  +d L+  + ++l+lL++++  +F ++Flt
  EPX72400.1 399 QSSPTFIDCSTGLNLLYKMNQTYLDCLKTSSLHSLKLLNENEIVNFPKVFLT 450
                 467************************************************8 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0018
                 HHHHHHHHHHHHTT--SS--TS-S-SHHHHHHHHHHHTSBBSTTS-BSS-TT--HHHHHHHHHHHHHHS--SS-EEEE.......- CS
     Nrap_D2   4 dAclLlkvWlrqRgfgssirkaggfggfewamllalllqgggkkgrkklskslssyqlfkavlqfLastdltkkpifl.......g 82 
                  A+ L k W   + +       + +++ ++ +l+a ++      + ++ +++ s    +  +l+fLa++d++ +p+++       +
  EPX72400.1 824 MAVRLAKHWFYSHMLT------NHVSDEVIELLIASVY-----VNSNAWQATASGETALCRMLHFLANWDWRFEPLVIdfrqrlpT 898
                 6899999999999999......5688899999999998.....578888999999999999***************9944433330 PP

>> Nrap_D6  Nrap protein domain 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       3.6   9.3e+03      37      66 ..     270     304 ..     257     310 .. 0.67
   2 !   95.0   0.1   1.6e-30   4.1e-27       2     134 ..     976    1094 ..     975    1095 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 3.6
                 --------.....GGGGGGS-HHHHHHHHHHHHHT CS
     Nrap_D6  37 Nlderaes.....dkllvkfdpvqllleeLerayg 66 
                 Nl++++e       + ++  d  +l+ ++L ++y+
  EPX72400.1 270 NLSADEELlptpfYNASILEDQSTLYYRDLVKKYS 304
                 55544444555553444445889999999999997 PP

  == domain 2  score: 95.0 bits;  conditional E-value: 1.6e-30
                  -S-SEEEEEE-SS--TTTT.......TB---------------GGGGGGS-HHHHHHHHHHHHHTTTEEEEE-S-HHEEEEEEE-GGGSS-EE--TT CS
     Nrap_D6    2 edYDvvihLkpkvlprlseavaekspgakkkskfkNlderaesdkllvkfdpvqllleeLeraygdtllffydklggdvigglwnpsvlkprkfkvn 98  
                  + Y +vi+L+   +p+++e         ++k k+kNl++ +   + +++f pv++++ee+++a++d++ +fy+k + ++igg++np++++pr+fk+n
  EPX72400.1  976 DAYHFVIELHAANIPTYRE---------NAKLKYKNLKSLS---TERPGFSPVSAFIEEIQNAFNDSIYLFYNKDDPKTIGGIFNPAIMNPRHFKIN 1060
                  68**************977.........34789*****877...5899************************************************* PP

                  --S-EEESSSS..EEEE-HHHHHHHHHHHHGGGEEE CS
     Nrap_D6   99 lgystkpvakekkevelNkeaileeiarlGggLvks 134 
                   +y +k v+k+  +v+++ +a+ ++i+++Gg+L+ks
  EPX72400.1 1061 INYPFKVVEKD--SVVVDTTAVCQQIQQIGGDLIKS 1094
                  *****999888..9********************97 PP

>> DUF1806  Protein of unknown function (DUF1806)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.19     5e+02      18      35 ..     464     481 ..     452     494 .. 0.78
   2 ?    8.6   0.0   0.00066       1.7      54      94 ..     813     853 ..     800     863 .. 0.86
   3 ?   -3.1   0.0       2.8   7.1e+03      29      54 ..     977    1002 ..     972    1009 .. 0.79

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.19
                 -EEEEEEEEE-------- CS
     DUF1806  18 dvylhlettnGayashad 35 
                  + +hlett+  y+  +d
  EPX72400.1 464 TIPVHLETTSENYTDLTD 481
                 5679*********98766 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00066
                 EEEEESSSSEEEEEEESSSEEEEEEE-EEEE-TT--EEEEE CS
     DUF1806  54 rakikgegpyrvGlkleegWvyaeGltdyevdeegrlllaG 94 
                 +a  +++ +y + ++l++ W y++ lt++  de  +ll+a 
  EPX72400.1 813 QAICQEHRSYSMAVRLAKHWFYSHMLTNHVSDEVIELLIAS 853
                 455667789*****************************996 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 2.8
                  -----------EEEEEEEEEEE-EEE CS
     DUF1806   29 ayashadekvlsagafirnakvkyer 54  
                  ay    + ++ ++ ++  nak+ky++
  EPX72400.1  977 AYHFVIELHAANIPTYRENAKLKYKN 1002
                  66666677788999999*****9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1099 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       432  (0.024095); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.73u 0.29s 00:00:01.02 Elapsed: 00:00:00.45
# Mc/sec: 7412.38
//
Query:       EPX72401.1  [L=271]
Description: Mam33 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.2e-51  174.8   4.2    2.6e-51  174.6   4.2    1.1  1  MAM33            Mitochondrial glycoprotein
  ------ inclusion threshold ------
      0.045   13.7   0.0        6.3    6.8   0.0    2.5  2  AdoMetDC_leader  S-adenosyl-l-methionine decarboxylase leader


Domain annotation for each model (and alignments):
>> MAM33  Mitochondrial glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  174.6   4.2   2.9e-55   2.6e-51       1     212 []      63     270 ..      63     270 .. 0.90

  Alignments for each domain:
  == domain 1  score: 174.6 bits;  conditional E-value: 2.9e-55
       MAM33   1 LesEikyekeavkeeeeepesvkeflenggFeiedkpgkeevtLtrkfgdekIrvtfsvadlaneeeeeeeeeeeeedeaeeeeeeeeeeeee...... 93 
                 LesEi+yek++v           + l   ++eied  g+++v+L+ + gde+I ++f+v+d ++e++ e++e +e e+ ++ + +e++ e  e      
  EPX72401.1  63 LESEIDYEKKHVL--------TDTSLPPIPYEIEDIRGDATVKLKTQNGDETIYIKFNVSDDTQEPALEDNEMSEFEEYEN-KGQEQPIE--Evpedev 150
                 89********844........44678899*******************************999999888887777776665.33333322..2346789 PP

       MAM33  94 ...eeesfpvrlsvtiekpgksggaLelectaqdgefvidnvsyykdaelakeetaeadwkrrllyeGPpFenLDedLqellerYLeerGIdeelaefi 189
                    e+ + + ++++++ +p  + g+L++e++a+d+ f+i+n+++ kda+  ++++ +a+w+rr++y GP+F++LD +Lq+l++++Leer Id+e a+f+
  EPX72401.1 151 gtsEDLGRFQPCTIEVVRP--DVGVLAFEAMAYDEGFEIENIFFSKDANVLTSDSVDAEWSRRKQYLGPSFKELDPELQDLFHNFLEERRIDSETASFV 247
                 9999999************..67**************************************************************************** PP

       MAM33 190 pdysevkEqkeYvrWLenvkkFv 212
                 +++  +kE keYvrWLenv++Fv
  EPX72401.1 248 ISFGLTKELKEYVRWLENVRDFV 270
                 **********************8 PP

>> AdoMetDC_leader  S-adenosyl-l-methionine decarboxylase leader peptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0     0.005        45      21      34 ..      82      95 ..      77     101 .. 0.84
   2 ?    6.8   0.0    0.0007       6.3      25      44 ..     163     182 ..     160     184 .. 0.92

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.005
  AdoMetDC_leader 21 PLgYtvEDvRPhGG 34
                     P+ Y +ED+R +  
       EPX72401.1 82 PIPYEIEDIRGDAT 95
                     899*******8765 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0007
  AdoMetDC_leader  25 tvEDvRPhGGikkFqsAaYs 44 
                      t+E vRP+ G+  F + aY 
       EPX72401.1 163 TIEVVRPDVGVLAFEAMAYD 182
                      8****************995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (271 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       418  (0.0233142); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1956.65
//
Query:       EPX72402.1  [L=613]
Description: cytoskeletal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.3e-33  113.4   0.1    9.1e-32  109.4   0.0    2.6  2  SPA       Stabilization of polarity axis
    4.8e-16   59.5   0.0      1e-15   58.4   0.0    1.5  1  Afi1      Docking domain of Afi1 for Arf3 in vesicle traffick
    2.6e-08   33.8   0.7    0.00012   21.8   0.1    2.4  2  DUF2347   Uncharacterized conserved protein (DUF2347)
    4.3e-05   22.4  12.2     0.0007   18.4   0.1    3.6  4  Avl9      Transport protein Avl9
  ------ inclusion threshold ------
       0.16   11.9   4.0        1.1    9.1   0.4    2.8  3  DENN      DENN (AEX-3) domain


Domain annotation for each model (and alignments):
>> SPA  Stabilization of polarity axis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.4   0.0   2.5e-35   9.1e-32       6     113 ..     259     366 ..     254     367 .. 0.94
   2 ?    1.4   0.0     0.085     3e+02      58      81 ..     376     400 ..     362     413 .. 0.74

  Alignments for each domain:
  == domain 1  score: 109.4 bits;  conditional E-value: 2.5e-35
         SPA   6 kllekftpeiillinalltskriivlstkasadevsefvLalsnlispagdvlrgfknnsfPyvdlseldalekvpgyIvGvtNPiFeeqeqlWDvlyd 104
                  + e  t++ii+lin ll++kr+++l++k +a+ +  +vL++s+l+s+a++ l+g+ n +fPyvdls++d+l k pgyI+G +NP F++++++WD+l+d
  EPX72402.1 259 PIDEAHTNPIIVLINSLLLQKRVLFLTSKLPAHVLTSYVLSASALASGASGLLQGYLNMTFPYVDLSNVDELLKLPGYIAGAMNPTFQYHQDWWDLLCD 357
                 5567789******************************************************************************************** PP

         SPA 105 ldsgsvkls 113
                 ld+  +++s
  EPX72402.1 358 LDNCIIHVS 366
                 **9777665 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.085
         SPA  58 lrgfknns.fPyvdlseldalekvp 81 
                 +r+++  +  Py +ls++++l++ +
  EPX72402.1 376 FRNLELIAsVPYNQLSSINKLKEHT 400
                 4444444479***********9875 PP

>> Afi1  Docking domain of Afi1 for Arf3 in vesicle trafficking
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.4   0.0   2.8e-19     1e-15       1      75 [.       5      77 ..       5     109 .. 0.83

  Alignments for each domain:
  == domain 1  score: 58.4 bits;  conditional E-value: 2.8e-19
        Afi1  1 yilvAeFdidkGpvikhqYPkaipgdetlseLAelmlPdqvhkrkqDitvFfLykdtsteeeeleeeekknklek 75
                yi++A Fd d+Gpv++ q+P +  g   +  LAe+mlPd +h+r++D+  FfL+  +  ++++l+++ +k+ +  
  EPX72402.1  5 YIFTAVFDPDQGPVLQYQFPRT--GHYDFRFLAEVMLPDRIHERNEDWLQFFLHFHEDLQSFSLFPSVTKAIKGP 77
                9*********************..8777777***************************99999998877555444 PP

>> DUF2347  Uncharacterized conserved protein (DUF2347)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.1   0.00011       0.4       1     121 [.       6     145 ..       6     209 .. 0.74
   2 !   21.8   0.1   3.3e-08   0.00012     176     275 ..     268     360 ..     253     367 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00011
     DUF2347   1 lflikFDvkkGytivwsksv.pdvelegvEfksLPSGihevsedlvyfv...heeyyglsaFrqneveeeeernvkmysv.Gvlvds...........s 83 
                 +f + FD  +G ++ ++ +   ++++  +    LP  ihe +ed+  f    he++   s+F + +   +  ++ k+y v  v+ ++           s
  EPX72402.1   6 IFTAVFDPDQGPVLQYQFPRtGHYDFRFLAEVMLPDRIHERNEDWLQFFlhfHEDLQSFSLFPSVTKAIKGPDGSKVYHVlNVIHTKreqlakrngtlS 104
                 577889999*****9999987899999988899**************99999****************9999999999652777777999999999998 PP

     DUF2347  84 nerlskawryaekLkellkkllese...dntsvLeeyfeke 121
                  + + ++  +++ Lk ll    +      +  +Le++f++ 
  EPX72402.1 105 AMAICTSFPHVQVLKPLLDSAWKRFdasPSSLTLEHVFKEL 145
                 88888999999999988854444332444566778888433 PP

  == domain 2  score: 21.8 bits;  conditional E-value: 3.3e-08
     DUF2347 176 ifpLykaaLlrkrILll.ssapveelcslvYllslLssipksleellksessrlrplfnvgvaDipsLekekkesgyiActtdeiLalkkeLyDvlvkl 273
                 i +L  + Ll+kr+L+l s+ p + l s+v   s+L+s    l +   +      ++ +v ++++++L k     gyiA   +  ++++++ +D+l +l
  EPX72402.1 268 IIVLINSLLLQKRVLFLtSKLPAHVLTSYVLSASALASGASGLLQGYLN-----MTFPYVDLSNVDELLKLP---GYIAGAMNPTFQYHQDWWDLLCDL 358
                 77888999*********88899999999999999999887776665543.....36779***********99...*********************999 PP

     DUF2347 274 pp 275
                 ++
  EPX72402.1 359 DN 360
                 87 PP

>> Avl9  Transport protein Avl9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.0   0.1    0.0012       4.2       9      64 ..      11      65 ..       3     107 .. 0.73
   2 ?   -1.9   0.1      0.28     1e+03     209     248 ..     157     196 ..     142     219 .. 0.71
   3 !    4.7   0.6    0.0029        10     177     211 ..     267     303 ..     260     314 .. 0.74
   4 !   18.4   0.1     2e-07    0.0007     266     376 ..     317     433 ..     312     436 .. 0.72

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0012
        Avl9  9 FhHkkGpevefsyppeeeekeekesewklLpflalpDGsHnfeedfvyFtleede.....s 64
                F   +Gp +++ +p      ++ +++++ L  + lpD  H+ +ed+  F l+++e     s
  EPX72402.1 11 FDPDQGPVLQYQFP------RTGHYDFRFLAEVMLPDRIHERNEDWLQFFLHFHEdlqsfS 65
                66677777777777......4567899************************9877444440 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.28
        Avl9 209 iSLipelieklqdsasplleslesdlelkkpeslkesdrk 248
                 +SL +++i  l+d  + + ++++s+ +l +++s++ s ++
  EPX72402.1 157 VSLNSSVILTLNDFHRYINSESQSQKSLMRTASHSRSFHS 196
                 6888888888888887777777777666666655544433 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.0029
        Avl9 177 kvLvlfKlllLekkvlvygs..pveklcelilsliSL 211
                  ++vl+  llL+k+vl+ +s  p + l++++ls   L
  EPX72402.1 267 PIIVLINSLLLQKRVLFLTSklPAHVLTSYVLSASAL 303
                 5799*************99612456677766665555 PP

  == domain 4  score: 18.4 bits;  conditional E-value: 2e-07
        Avl9 266 lflPYlpLqqldlLsdksvksflvGtsNsLllqqkelladvlvdvdeaeieikdkelkkalqlsteDkrfidel.vkkveetkedaeeetegfe..... 358
                 +  PY+ L  +d+L   +  ++++G+ N  ++ +++   d+l d+d+  i+++ + +kk++  s + +  i ++ ++++++ ++ +e+++++       
  EPX72402.1 317 MTFPYVDLSNVDEL--LKLPGYIAGAMNPTFQYHQDW-WDLLCDLDNCIIHVSPELTKKNM--SFRNLELIASVpYNQLSSINKLKEHTEQQLIsdlqk 410
                 678***********..899*************99998.**************966666655..555556665553333333333333333222233344 PP

        Avl9 359 .....GsddwiRaqfeeYlvall 376
                        +  +R+++ +Yl++++
  EPX72402.1 411 mlihrNKELLVRWRIRSYLLSFI 433
                 55555888899999999999887 PP

>> DENN  DENN (AEX-3) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.025        88       4      47 ..     104     147 ..     102     169 .. 0.92
   2 ?    9.1   0.4   0.00031       1.1      70     124 ..     240     296 ..     223     305 .. 0.82
   3 ?   -2.2   0.0      0.95   3.4e+03       9      31 ..     584     606 ..     579     611 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.025
        DENN   4 kalcilsrlpffelfkkiLkalekrlkssskeaplesfianlll 47 
                 +a++i + +p+++++k +L+  +kr   s+++++le++ ++l++
  EPX72402.1 104 SAMAICTSFPHVQVLKPLLDSAWKRFDASPSSLTLEHVFKELCS 147
                 68999********************************9999664 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00031
        DENN  70 llqrpedselPledvdlkelfrcLsienilqlfeavLlErriillSekl..arLtsv 124
                 l+q+  +s+lPl+++  +  +    ++ i+ l+ ++Ll +r+++l +kl  ++Lts 
  EPX72402.1 240 LIQTFINSSLPLSKYTSSLPIDEAHTNPIIVLINSLLLQKRVLFLTSKLpaHVLTSY 296
                 556667899***********************************9988633455555 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 0.95
        DENN   9 lsrlpffelfkkiLkalekrlks 31 
                 +sr+++ + f ++L+++ k +  
  EPX72402.1 584 VSRHKYGQIFFSCLSEVDKLMYA 606
                 79999999999999999887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (613 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       606  (0.0338); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 4305.94
//
Query:       EPX72403.1  [L=414]
Description: membrane transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.8e-40  137.0   9.1    2.8e-40  137.0   9.1    2.3  2  DUF2838         Protein of unknown function (DUF2838)
  ------ inclusion threshold ------
      0.087   12.7   0.2       0.14   12.1   0.2    1.2  1  Apolipoprotein  Apolipoprotein A1/A4/E domain
       0.24   11.4   0.5       0.68   10.0   0.1    1.8  2  DUF1640         Protein of unknown function (DUF1640)


Domain annotation for each model (and alignments):
>> DUF2838  Protein of unknown function (DUF2838)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.0   9.1   4.7e-44   2.8e-40       1     111 []     113     223 ..     113     223 .. 1.00
   2 ?    0.1   1.1      0.16   9.5e+02      50      84 ..     325     356 ..     309     377 .. 0.69

  Alignments for each domain:
  == domain 1  score: 137.0 bits;  conditional E-value: 4.7e-44
     DUF2838   1 dklsFvlgvlnvlltafllgaapellplvylvlllvllplryityrkkklhyfllDfCYfvnilllllllvlpeseklfkavfalanGplalAiilwrn 99 
                 dk+sF+lgv + +lta+llg+ape+++++y+++ll++lplry+ty++k++ yf++DfCY+ ni+ll +++v+p s++lf++ +++++G+la+++++wrn
  EPX72403.1 113 DKVSFLLGVSTSILTALLLGMAPEYIHIWYTIQLLIFLPLRYYTYHRKGYVYFIADFCYWGNIMLLAYIWVFPFSRRLFILSYSVSYGTLAWSVVAWRN 211
                 8************************************************************************************************** PP

     DUF2838 100 slvfhsldkvtS 111
                 sl+fhsldk+tS
  EPX72403.1 212 SLLFHSLDKITS 223
                 ***********8 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.16
     DUF2838  50 lhyfllDfCYfvnilllllllvlpeseklfkavfa 84 
                 + +++l + Y + +++ + +++ ++   ++ +vf 
  EPX72403.1 325 FAFMVLQYLYSITTMCPCSIWYNNK---VYSTVFL 356
                 5677777777777888888887543...3333332 PP

>> Apolipoprotein  Apolipoprotein A1/A4/E domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.2   2.3e-05      0.14     129     164 ..      69     104 ..      54     115 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.3e-05
                     HHHHHHHHHHH-----..-----SSSHHHHHHHTS- CS
  Apolipoprotein 129 klaerleelkeslaphaeeveerlssrveelrekle 164
                     + +++l+ l+++l++++e+++e++   ++el++k++
      EPX72403.1  69 RQKHKLQPLHRQLNQESEKLKEKFGHSIDELQAKWN 104
                     557889999999999999999999999999999986 PP

>> DUF1640  Protein of unknown function (DUF1640)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.1   0.00011      0.68      95     170 ..      52     127 ..      44     131 .. 0.77
   2 ?   -1.2   0.0       0.3   1.8e+03      83     115 ..     378     410 ..     377     412 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00011
     DUF1640  95 LreeidklkadirldlnleKgrireelakleakiqelnnkidrevsalrteiEsvKldvikyliglvvgilavgla 170
                 ++++ +k k + r  +n +K + +  + +l+++ ++l++k+  ++ +l+++ +s  +   +  + +++g+++ +l 
  EPX72403.1  52 IQNHYKKKKGQLRHGVNRQKHKLQPLHRQLNQESEKLKEKFGHSIDELQAKWNSGQMVRFRDKVSFLLGVSTSILT 127
                 5566667777777778999999999999999999999999999999999988888888777777777777777665 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.3
     DUF1640  83 klqreleklkqkLreeidklkadirldlnleKg 115
                 + q+ele lk ++ ++ ++   + +ld ++ K+
  EPX72403.1 378 RFQKELETLKLEIANDPSRSSPSSELDPENSKS 410
                 568899999999999988888888888777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (414 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1137  (0.0634168); expected 358.6 (0.02)
Passed bias filter:                      742  (0.0413855); expected 358.6 (0.02)
Passed Vit filter:                        80  (0.00446204); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.28s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 2912.63
//
Query:       EPX72404.1  [L=765]
Description: GTPase activating protein Sec23b [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.2e-69  232.2   0.0      9e-69  231.7   0.0    1.2  1  Sec23_trunk     Sec23/Sec24 trunk domain
    3.9e-29  101.2   0.2      9e-29  100.1   0.2    1.7  1  Sec23_BS        Sec23/Sec24 beta-sandwich domain
    2.8e-22   78.5   0.1    5.9e-22   77.4   0.1    1.6  1  Sec23_helical   Sec23/Sec24 helical domain
    2.5e-14   53.0   8.4    5.2e-14   52.0   8.4    1.6  1  zf-Sec23_Sec24  Sec23/Sec24 zinc finger
    1.4e-11   44.1   0.0    3.7e-11   42.8   0.0    1.7  1  Gelsolin        Gelsolin repeat
  ------ inclusion threshold ------
       0.11   11.9   0.1       0.23   10.9   0.1    1.5  1  Vps36-NZF-N     Vacuolar protein sorting 36 NZF-N zinc-finger


Domain annotation for each model (and alignments):
>> Sec23_trunk  Sec23/Sec24 trunk domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  231.7   0.0     3e-72     9e-69       2     243 .]     121     390 ..     120     390 .. 0.98

  Alignments for each domain:
  == domain 1  score: 231.7 bits;  conditional E-value: 3e-72
                  S--EEEEEEE-SHHHHHHTHHHHHHHHHHHHCTTSSTSTT-EEEEEEESSSEEEEETSTTS.......SSSEEEEECHTTSCC............... CS
  Sec23_trunk   2 kppvflFviDvsleaikegelkalkeslkqsLdllPeepralvglitfdsvvhffelksel.......rqpkelvvsdlqdvf............... 77 
                   ppvflF++D++++   e+el+a+k++++ sL+llP  p+a vglitf+sv++++e+++++       + + +++ ++lq ++               
   EPX72404.1 121 APPVFLFLVDTAVS---ESELQAMKDAIIVSLSLLP--PDAIVGLITFGSVIQVHEIGFHAipksfcfQPDANYSSMQLQYLLglsggqfrpmgsktt 213
                  7************9...*******************..******************************99**************************** PP

                  .........SSTSSSSSEETTTTHHHHHHHHHHHHH.HSTT-TTC-----HHHHHHHHHHHHCHCT..S-EEEEEEESS---SSTTTSS-SBTTS... CS
  Sec23_trunk  78 .........lpladrlLvplseseavledlLeelpe.mfavtagkrperalgpalkaavellkave..tggkiivfvgslptvgaggklksrede... 160
                           l  a+r+L+p++++e +l ++Le+l++ + +v+ gkr  r++g+alk+++ ll++++  +g++i +f+g+++t+g+g++++ +++e   
   EPX72404.1 214 iqgtgvtlnLGAASRFLLPVQHCELHLLNILEQLSPdPSPVPLGKRALRCTGSALKISATLLEIAFpkSGARIELFAGGPCTIGPGQVVSVELKEpmr 311
                  *******988888****************************************************9*9**************************99** PP

                  CCTSSTTCHHCHSCSSSCHHHHHHHHHHHCTEEEEEEEECSS--SHHHHTHHHHTTT-EEEEETTTCCHHHHHHHHHHHHHHH CS
  Sec23_trunk 161 slldidkekaklvkkadkfYkkLakecvkqgisvDlFlfsldyvdlaelkqlaeltgGqvvlydsFsaekdasklkqdlkrvv 243
                  s+++ +++kak++kka +fYk+ a+++++ g++vD+F+++ld+v+++e+++l+++tgG++vl+dsFs    +s+++q+++r +
   EPX72404.1 312 SHSELENDKAKHFKKARRFYKEEAQRLSEFGHTVDIFAGCLDQVGIMEMESLVNYTGGHIVLSDSFS----TSIFRQSYQRLF 390
                  *******************************************************************....*********986 PP

>> Sec23_BS  Sec23/Sec24 beta-sandwich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.1   0.2     3e-32     9e-29       1      95 [.     401     504 ..     401     505 .. 0.93

  Alignments for each domain:
  == domain 1  score: 100.1 bits;  conditional E-value: 3e-32
                 EEEEEEEEEE-TTEEEEEEESSSEEC....STBESSEESECSESEEEEEEEETT--EEEEEEE.....SSBTCTTSEEEEEEEEEEEETTSEEEEEEEE CS
    Sec23_BS   1 gfnatlevrtSkelkvsgliGncvsl....snvsekeiGeggtsewklcsldpdstlavyfdi.....deklksgkqayiQfatlYthssgerrlRVtt 90 
                 gf  tl+v tSk+l+v+g+iGn   +    +n s+++iG+g+t +w++++++p+st+a+yfd      +  +++  q+yiQf+tlY+h+sg++rlRVtt
  EPX72404.1 401 GFTSTLDVITSKGLNVCGMIGNGLGEskksNNTSDTVIGIGKTDSWRISTISPKSTFAIYFDLskemnNPASQHPAQSYIQFLTLYQHASGTYRLRVTT 499
                 6899*******************9998888799******************************888764458889************************ PP

                 EEEEE CS
    Sec23_BS  91 valpv 95 
                 +++++
  EPX72404.1 500 ISRSF 504
                 *9976 PP

>> Sec23_helical  Sec23/Sec24 helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.4   0.1     2e-25   5.9e-22       1     102 [.     517     615 ..     517     616 .. 0.95

  Alignments for each domain:
  == domain 1  score: 77.4 bits;  conditional E-value: 2e-25
                    -HHHHHHHHHHHHHHHTTTS-HHHHHHHHHHHHHHHHHHHHHH-------------GGGTTHHHHHHHHHTSTTTS-.-TT--HHHHHHHHHHHHH CS
  Sec23_helical   1 DqeavtvllakqaidkalesgladarealdtslvdllsayrkvgasgsspsqlqlpeslklLPlyilallKspafrg.gnsvpaDervfalsllls 95 
                    Dqea++vl+a++a+ k+ + +   + +++d++l++l++++ ++ ++  +p +++l  ++ l+P+++++l++s+ f++ +n++p De++f+++ l+ 
     EPX72404.1 517 DQEAAAVLIARMALFKCNNDDEYGVARWIDRTLIRLCQNFADYRKG--DPLSFRLLPNFTLFPQFMFHLRRSQ-FLQvFNNSP-DETSFYRHTLNF 608
                    9****************9988889********************99..999**********************.8888*****.**********99 PP

                    --HHHHH CS
  Sec23_helical  96 lpvdqll 102
                     +v ++l
     EPX72404.1 609 SDVMDSL 615
                    9998776 PP

>> zf-Sec23_Sec24  Sec23/Sec24 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.0   8.4   1.8e-17   5.2e-14       1      39 []      53      92 ..      53      92 .. 0.99

  Alignments for each domain:
  == domain 1  score: 52.0 bits;  conditional E-value: 1.8e-17
  zf-Sec23_Sec24  1 PirCrr.CraylNpfckidfggkrwiCnfCnhknevppeY 39
                    Pi Cr  Cra+lNp+c++d +++ wiC+fC+++n +pp+Y
      EPX72404.1 53 PITCRApCRAVLNPYCNVDLRARFWICPFCFQRNSLPPQY 92
                    9**************************************9 PP

>> Gelsolin  Gelsolin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.8   0.0   1.2e-14   3.7e-11       6      76 .]     633     718 ..     629     718 .. 0.96

  Alignments for each domain:
  == domain 1  score: 42.8 bits;  conditional E-value: 1.2e-14
                 EEBSSSGGGEETTSEEEEEESS........EEEEEEHTT..SHHHHHHHHHHHHHHHH.....HCTTTTTSEEEEEETTHHHHHHH CS
    Gelsolin   6 kvvklsssslesgdcyLLdngf........tiflWiGke..ssqeeknfaadlaaeld.....seerfplpeliredqgkeparFl 76 
                  +v+l+s s++s+ ++LLd++f         i++W++++  + +e+ n + +l a+         +rfp p++i++dqg+++arFl
  EPX72404.1 633 IPVLLDSMSIKSDVILLLDTFFhilifhgsVIAQWRNAGyqDLPEYTNIKELLLAPKLevtelLADRFPIPRFIVCDQGGSQARFL 718
                 69**************************************999************9999****99********************7 PP

>> Vps36-NZF-N  Vacuolar protein sorting 36 NZF-N zinc-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   7.8e-05      0.23       9      34 ..      76     101 ..      71     102 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 7.8e-05
  Vps36-NZF-N   9 tWvCpICsfsNevpsnfdpnastplP 34 
                   W+Cp C   N++p ++   ++++lP
   EPX72404.1  76 FWICPFCFQRNSLPPQYHDISTNNLP 101
                  5*************999875666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (765 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       408  (0.0227564); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.64u 0.29s 00:00:00.93 Elapsed: 00:00:00.45
# Mc/sec: 5100.42
//
Query:       EPX72405.1  [L=439]
Description: homoserine dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.4e-52  176.9   0.0      5e-52  176.3   0.0    1.3  1  Homoserine_dh  Homoserine dehydrogenase
    1.2e-16   61.4   0.0    3.4e-16   59.9   0.0    1.8  2  NAD_binding_3  Homoserine dehydrogenase, NAD binding domain
  ------ inclusion threshold ------
       0.12   11.7   0.0       0.28   10.5   0.0    1.6  1  2-Hacid_dh_C   D-isomer specific 2-hydroxyacid dehydrogenase,


Domain annotation for each model (and alignments):
>> Homoserine_dh  Homoserine dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  176.3   0.0   8.4e-56     5e-52       1     173 []     221     425 ..     221     425 .. 0.92

  Alignments for each domain:
  == domain 1  score: 176.3 bits;  conditional E-value: 8.4e-56
                    --HHHH.HHTCTTSEEEEEEEE--HHHHHHHHHHHCHT....T-HHHHHHHHHHTTSS-SSTHHHHTTHHHHHHHHHHHHHHCTTT-.-GGGSEE- CS
  Homoserine_dh   1 Piiktl.keilsgdritrieGilngtlnyiltemeeeg....asfsevlkeaqelGyaeaDptdDveGlDaarKlailarlafglev.eledveve 90 
                    Pii+tl ++i++gd+i ++eGi++gtl+yi++ ++ +g    asfs+++k a+e+Gy+e+Dp+dD++G+D+arK++il+rla g++v ++++++v+
     EPX72405.1 221 PIISTLkELIATGDEILKVEGIFSGTLSYIFNVWSPNGkkgtASFSDIVKIAKENGYTEPDPRDDLNGMDVARKVTILSRLA-GVQVeSPSSFPVK 315
                    9*****99***************************665666788**************************************.999977899**** PP

                    -ST...............TS-HHH......HHHHHCTTEEEEEEEEE..C..EEEEEEEEEETTSGGGHSSST-EEEEEEESSSEE..EEEEES-S CS
  Homoserine_dh  91 gis...............kltaed......ikeakeegkvlklvasa..v..earVkpelvpkshplasvkgsenavlvetdrlge..lviqGpga 159
                    ++                 l+++d       +ea++egkv+++v++a  v  ++ Vk+e++++shp+a+++ s+n+++++t+r++   lvi G+ga
     EPX72405.1 316 SLIpkplesaanadefmaGLPNYDaefakiRDEAEKEGKVVRFVGEAdvVnkSTLVKLEKYDASHPFANLQSSDNIIAFTTKRYQArpLVIIGAGA 411
                    *9999999888888888867777677788888999***********997355899******************************99********* PP

                    SHHHHHHHHHHHHH CS
  Homoserine_dh 160 GaepTAsavlsDll 173
                    G+++TA++vl+D++
     EPX72405.1 412 GPAVTAAGVLGDMI 425
                    ************96 PP

>> NAD_binding_3  Homoserine dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.9   0.0   5.7e-20   3.4e-16       1     117 []      77     213 ..      77     213 .. 0.96
   2 ?   -3.0   0.0       1.8   1.1e+04     102     114 ..     344     356 ..     339     393 .. 0.64

  Alignments for each domain:
  == domain 1  score: 59.9 bits;  conditional E-value: 5.7e-20
                    --SHHHHHHHHHHHH---S......SEEEEEEEEESS.EEE-TT........HHHHHT--CB---HHHHHHHH....S-EEEEE-S--HHHHTTHH CS
  NAD_binding_3   1 GlGaiGsavleqlkrqqse......ielelvavadrd.sllskd........rkallasealtldlddliahl....dpdvvVEcasseavaelvl 77 
                    G G+iG+++++q+++ + +       ++++va++  +   +s+d        + +l a+ +  l++d l+++l     p +vV+++ss+ va+ ++
     EPX72405.1  77 GTGTIGGELINQIRDFNVTasqkgtPSFNVVAITSTRgYCISNDykpidltqWRNLHAQNQGALSVDVLLDFLssspLPAIVVDNTSSDLVASSYP 172
                    89*************999999999999**********9999999*********9*****************9999966****************** PP

                    HHHHTTEEEE-S--CGGG.-HHHHHHHTSSSTTS--.EE-G CS
  NAD_binding_3  78 kaLkagkdvvtankgala.dealyeeLreaaeangakiyve 117
                    k+L++++++ t+nk+ ++ + + y+ L+ea+++++ ++++e
     EPX72405.1 173 KFLAKNISIATPNKKGFSaNADVYNSLVEASKTSNGHLMHE 213
                    ***********************************999876 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.8
                    HHTSSSTTS--.E CS
  NAD_binding_3 102 eLreaaeangaki 114
                    ++r++ae+ g+ +
     EPX72405.1 344 KIRDEAEKEGKVV 356
                    5555555555433 PP

>> 2-Hacid_dh_C  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   4.7e-05      0.28      26      60 ..      60      94 ..      43      99 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 4.7e-05
                  TCCGSBS-GTTSEEEEES-SHHHHHHHHHHHHTT- CS
  2-Hacid_dh_C 26 ekallgkelsgktvGiiGlGrIGqavakrlkafgm 60
                  ++ ++ +e ++  v+iiG+G IG ++++ ++ f++
    EPX72405.1 60 NRFHKMTERTNVNVAIIGTGTIGGELINQIRDFNV 94
                  445667789999***************99999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (439 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       386  (0.0215294); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 3086.96
//
Query:       EPX72406.1  [L=328]
Description: serine/threonine protein phosphatase PP1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.3e-38  133.6   0.4    1.7e-38  133.2   0.4    1.2  1  Metallophos  Calcineurin-like phosphoesterase
    1.4e-22   79.9   1.6    2.9e-22   78.8   1.6    1.6  1  STPPase_N    Serine-threonine protein phosphatase N-terminal 


Domain annotation for each model (and alignments):
>> Metallophos  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.2   0.4   1.9e-42   1.7e-38       4     201 ..      59     248 ..      56     251 .. 0.94

  Alignments for each domain:
  == domain 1  score: 133.2 bits;  conditional E-value: 1.9e-42
                  EEEESBTBTTCCTHHHHHHHHHHHH..HHHTTESEEEEESTSSSSSHHHHHHHHH.HHHHHHHTSEEEEEC-TTS........CHHHHHHHHHHHHHH CS
  Metallophos   4 lvigDlHlalgggqlddllkllddl..lreekpdlvllaGDlvdrgdlekellel.laalvkypipvylllGNHe........gfeeellnkygylgi 90 
                   ++gD+H     gq++dll+l++    ++e  ++l+l  GD+vdrg  + e++ l la+++kyp ++++l+GNHe        gf++e++++y     
   EPX72406.1  59 KICGDIH-----GQYYDLLRLFEYGgfPPE-ANYLFL--GDYVDRGKQSLEVICLlLAYKIKYPENFFILRGNHEcasinriyGFYDECKRRYN---- 144
                  58*****.....**********77753555.99****..*******9999999999************************************99.... PP

                  HHHHHEHHHCEEETSEEEEEETTEEEEEEEESE.CEEETHHHHHHHHHHHSCHHHHCC...HHHHHHHHHHTTCSEEEEEESSESSCSSSCSCCHHHH CS
  Metallophos  91 fsepwrsdaevfnnlplaslgsgslkvlllhGg.spellvsldklgslnleleapepg...dewlkdlekrekadwvivlgHsplyrgsgylfgdeal 184
                    ++w++++++fn+lp+a++++   k++++hGg sp+l +s d++ ++ +++++p+ g   d++++d       +   + g+  + rg + +fg++++
   EPX72406.1 145 -IKLWKTFTDCFNCLPIAAIIDE--KIFTMHGGlSPDL-NSMDQIQRIMRPTDVPDTGllcDLLWSD-------PDNDLTGWGDNDRGVSFTFGPDVV 231
                  .99********************..********77777.****************************.......************************ PP

                  HHHHHHTTESEEEEESS CS
  Metallophos 185 edllkkygvdlvisGHt 201
                   ++l k++ dlv+++H+
   EPX72406.1 232 SRFLHKHDMDLVCRAHQ 248
                  ****************8 PP

>> STPPase_N  Serine-threonine protein phosphatase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.8   1.6   3.2e-26   2.9e-22       1      48 []       8      55 ..       8      55 .. 0.96

  Alignments for each domain:
  == domain 1  score: 78.8 bits;  conditional E-value: 3.2e-26
   STPPase_N  1 vDdiIerLlevrgkpggkkvqLseaEIrqlCakareiFLsQPtLLeLe 48
                +D+iI+rLlevr +++gk+vqL e+EIr+lC+kareiF+sQP+LLeLe
  EPX72406.1  8 LDSIIDRLLEVRVNRPGKQVQLAENEIRFLCNKAREIFISQPILLELE 55
                7************7777******************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       414  (0.0230911); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2324.31
//
Query:       EPX72407.1  [L=66]
Description: 60S ribosomal protein L29 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.3e-21   74.9  15.2    6.1e-21   74.5  15.2    1.2  1  Ribosomal_L29e  Ribosomal L29e protein family


Domain annotation for each model (and alignments):
>> Ribosomal_L29e  Ribosomal L29e protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.5  15.2   3.4e-25   6.1e-21       1      40 []       3      42 ..       3      42 .. 1.00

  Alignments for each domain:
  == domain 1  score: 74.5 bits;  conditional E-value: 3.4e-25
  Ribosomal_L29e  1 KsKNhTnHNqsrKaHRNGIKkpksqrykslkgvdpkflrN 40
                    KsKNhTnHNq++KaHRNGIK+p+++ry slk  d+kf+rN
      EPX72407.1  3 KSKNHTNHNQNKKAHRNGIKRPQKHRYDSLKYRDAKFRRN 42
                    9*************************************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       721  (0.0402142); expected 358.6 (0.02)
Passed bias filter:                      201  (0.0112109); expected 358.6 (0.02)
Passed Vit filter:                         9  (0.00050198); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.26s 00:00:00.63 Elapsed: 00:00:00.42
# Mc/sec: 469.95
//
Query:       EPX72408.1  [L=525]
Description: FACT complex component Pob3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.3e-29  100.0   0.0    1.3e-26   92.8   0.0    2.4  2  POB3_N    POB3-like N-terminal PH domain
    9.1e-28   96.0   0.0    2.4e-27   94.6   0.0    1.8  1  SSrecog   Structure-specific recognition protein (SSRP1)
    1.1e-26   93.1   0.0    4.3e-23   81.5   0.0    2.9  3  Rtt106    Histone chaperone Rttp106-like


Domain annotation for each model (and alignments):
>> POB3_N  POB3-like N-terminal PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.8   0.0   2.2e-30   1.3e-26       2      92 ..       7      97 ..       6      98 .. 0.98
   2 !    4.9   0.0    0.0061        36      49      86 ..     402     439 ..     356     445 .. 0.81

  Alignments for each domain:
  == domain 1  score: 92.8 bits;  conditional E-value: 2.2e-30
      POB3_N  2 efeniylelsgdsGklrlsesglgwknsktgkvvqikasdissaqWvrvargyqLrillkdgkvvrfdGFkeedfdkLskllkknfniele 92
                +++niyl+ls ++Gklr++ sglgwk+s   + ++++ s+i+ + W+++argy+L+i lk+++ v++dGF +edfd L++++k+n+++ +e
  EPX72408.1  7 QYDNIYLNLSAQPGKLRIAPSGLGWKSSALTEPFTLPLSEIRRFCWSHFARGYELKIILKNRSPVSLDGFAQEDFDGLASFIKQNYDMGIE 97
                89**************************************************************************************887 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.0061
      POB3_N  49 rvargyqLrillkdgkvvrfdGFkeedfdkLskllkkn 86 
                  ++r++ L + l++g+ ++f+  ++e+++ + ++l+++
  EPX72408.1 402 SASRTFDLTFSLRSGTSYQFSNINREEQNAIVRYLESK 439
                 345999***********************999999865 PP

>> SSrecog  Structure-specific recognition protein (SSRP1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.6   0.0     4e-31   2.4e-27       1      69 []     105     176 ..     105     176 .. 0.91

  Alignments for each domain:
  == domain 1  score: 94.6 bits;  conditional E-value: 4e-31
     SSrecog   1 GwNwGkaefegselvfqvdnkpafeiplsevsncnlagknEvaleFhqdddaaene...dqLvEmRfyvPgt 69 
                 GwNwG+ ef gselvf+v+++pafeip+s v+n+nl+gknEvaleF++ +d+ + +   d+LvEmR+y+Pgt
  EPX72408.1 105 GWNWGDSEFLGSELVFNVNSRPAFEIPISAVNNSNLSGKNEVALEFSNVKDSPVPSaqaDELVEMRLYIPGT 176
                 9*********************************************9655555444577***********96 PP

>> Rtt106  Histone chaperone Rttp106-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0   0.00052       3.1      29      83 ..      39      91 ..      11      93 .. 0.77
   2 ?   -2.6   0.0       1.3   7.5e+03      21      43 ..     119     141 ..     113     153 .. 0.71
   3 !   81.5   0.0   7.2e-27   4.3e-23       2      89 .]     355     445 ..     354     445 .. 0.97

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00052
      Rtt106 29 llfiplediesvsfeRvsvtsrtfdlvvelkk.eeveFsmidqeelegidefvksk 83
                ++ +pl++i +   +      r  +l++ lk+  +v+++   qe+++g+++f+k++
  EPX72408.1 39 PFTLPLSEIRRFCWS---HFARGYELKIILKNrSPVSLDGFAQEDFDGLASFIKQN 91
                566777888777777...668999******999********************986 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.3
      Rtt106  21 llfgfkkPllfiplediesvsfe 43 
                 ++++ ++P++ ip++ ++  +++
  EPX72408.1 119 VFNVNSRPAFEIPISAVNNSNLS 141
                 55566788888888888777665 PP

  == domain 3  score: 81.5 bits;  conditional E-value: 7.2e-27
      Rtt106   2 gVkasrkakeGlLyflekgllfgfkkPllfiplediesvsfeRv...svtsrtfdlvvelkk.eeveFsmidqeelegidefvkskgikiks 89 
                 +Vk+s ka+eG+Ly l+++llf ++kP+++i+++d ++v+++Rv    ++srtfdl+++l++ ++++Fs+i++ee++ i ++++sk +ki++
  EPX72408.1 355 AVKCSFKANEGQLYILDQYLLF-IPKPTILITIADLARVTLSRVgmsVSASRTFDLTFSLRSgTSYQFSNINREEQNAIVRYLESKHVKIHN 445
                 8*********************.***********************8889**********888**************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (525 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       780  (0.0435049); expected 358.6 (0.02)
Passed bias filter:                      539  (0.030063); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.27s 00:00:00.85 Elapsed: 00:00:00.41
# Mc/sec: 3807.74
//
Query:       EPX72409.1  [L=124]
Description: hypothetical protein SOCG_00173 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.033   14.6   0.6      0.045   14.2   0.6    1.2  1  DUF4199        Protein of unknown function (DUF4199)
       0.13   11.9   0.0       0.16   11.7   0.0    1.1  1  Peptidase_U40  Peptidase U40


Domain annotation for each model (and alignments):
>> DUF4199  Protein of unknown function (DUF4199)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.6     5e-06     0.045      35      93 ..      42     100 ..      31     108 .. 0.63

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 5e-06
     DUF4199  35 lla.....llllllv.pflvylalkkyrkknlgGfisfgqafgfgflislvagllsavfqyiyfn 93 
                 +++     l ++++v  +++y+a+k++ ++   G        ++++++s + +l++++++y+yf+
  EPX72409.1  42 VFWekfirLNSIVMVySYICYFAIKDK-DTSVRG-----SFASYTIIPSSIFALICLLAIYAYFR 100
                 444443334444443444556666644.222244.....44578999*****************8 PP

>> Peptidase_U40  Peptidase U40
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.7e-05      0.16     107     159 ..      23      75 ..       7      84 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.7e-05
  Peptidase_U40 107 gqfnrqtwdrlrrlgrnlpafeegsaqlnaslyaigflylenkrayeasfkgr 159
                     ++nr  w+rlr+    l  f e   +ln+ +    ++     +  ++s++g 
     EPX72409.1  23 ENYNRCLWERLRKRNEGLSVFWEKFIRLNSIVMVYSYICYFAIKDKDTSVRGS 75 
                    579**************************998887777655555666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       587  (0.0327403); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 890.35
//
Query:       EPX72410.1  [L=133]
Description: hypothetical protein SOCG_05570 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.011   15.9   0.0      0.014   15.5   0.0    1.1  1  DUF3278        Protein of unknown function (DUF3278)
       0.49    9.9   4.7       0.83    9.2   4.7    1.3  1  Phospholamban  Phospholamban


Domain annotation for each model (and alignments):
>> DUF3278  Protein of unknown function (DUF3278)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.5   0.0   1.5e-06     0.014      23     104 ..      16     103 ..       3     108 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.5e-06
     DUF3278  23 Deykrqeinrignnafillwlyllilslvalllakktpese....lilglvl..tnlllvvlvsglYiliaskklglatkeveakdye 104
                 D y+r +   i nn ++++     +l +++++   +t+++     l++ l l  t l++v+     Y++ +s  +++  ke e  ++e
  EPX72410.1  16 DSYERINQAIIENNTALFIVNCCTLLVCLVIICLAATKNYHgkvdLVNHLYLasTPLFIVMTTCYFYMRAKSLSSRVPRKERERIERE 103
                 7788888888999999999988877777777777778777522225555444346677777778888888888888877776665555 PP

>> Phospholamban  Phospholamban
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   4.7   9.3e-05      0.83      27      47 ..      28      49 ..      17      51 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 9.3e-05
  Phospholamban 27 nLqdL.iinFsLiLiCLLLiyi 47
                   n   L i+n + +L+CL++i++
     EPX72410.1 28 NNTALfIVNCCTLLVCLVIICL 49
                   44455167*************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       676  (0.0377043); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 988.33
//
Query:       EPX72411.1  [L=817]
Description: WD repeat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.5e-19   68.2  15.4    9.4e-06   26.3   0.1    6.7  6  WD40         WD domain, G-beta repeat
    6.8e-05   23.1   0.1     0.0053   17.0   0.0    3.7  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.3   0.1     1e-09   9.4e-06       3      38 .]      37      73 ..      35      73 .. 0.91
   2 !   11.9   0.1   3.7e-05      0.33       2      38 .]      79     119 ..      78     119 .. 0.79
   3 !   15.0   0.3   3.8e-06     0.034       3      38 .]     135     171 ..     133     171 .. 0.89
   4 ?    0.1   0.1       0.2   1.8e+03       3      17 ..     260     272 ..     246     292 .. 0.65
   5 !   17.5   0.1   6.2e-07    0.0055       3      38 .]     668     707 ..     666     707 .. 0.82
   6 ?    2.3   0.0     0.041   3.7e+02      13      37 ..     724     748 ..     712     749 .. 0.77

  Alignments for each domain:
  == domain 1  score: 26.3 bits;  conditional E-value: 1e-09
                EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38
                ++++l+ H s++++l +s +g +l+sG+dD  + iWd
  EPX72411.1 37 LQKELSYHsSCINALNWSENGEYLLSGGDDTQLVIWD 73
                6788999*677*************************9 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 3.7e-05
                 EEEEEEE.SS.SSEEEEEEETTSSE..EEEEETTSEEEEEE CS
        WD40   2 qclrtlt.GH.ssvtslafspdgaw..lasGsdDgtvriWd 38 
                 ++l++++ GH  ++ s++f p+++   ++s+s D+ v+++d
  EPX72411.1  79 EPLHVIStGHlHNIFSVKFLPHSDSrkVMSASGDNLVKLFD 119
                 67888755**878*****777777777777766******98 PP

  == domain 3  score: 15.0 bits;  conditional E-value: 3.8e-06
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +lr +  H +sv  +  ++dg+ ++++s+Dgtvr +d
  EPX72411.1 135 QLRCWNCHsDSVKRIIPCDDGSTFLTCSEDGTVRQFD 171
                 5778889*666***********************987 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 0.2
                 EEEEEESSSSEEEEE CS
        WD40   3 clrtltGHssvtsla 17 
                  +++l+ H  ++++ 
  EPX72411.1 260 SQGILDHH--INCCE 272
                 34555555..88875 PP

  == domain 5  score: 17.5 bits;  conditional E-value: 6.2e-07
                 EEEEEESSSSEEEEE....EETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGHssvtsla....fspdgawlasGsdDgtvriWd 38 
                 +++++ GH++v  ++    f  +  +++sGsdDg+  iWd
  EPX72411.1 668 HVKSYYGHCNVETVKdvnfFGLNDEYVMSGSDDGKFFIWD 707
                 68899***776666666688888888*************9 PP

  == domain 6  score: 2.3 bits;  conditional E-value: 0.041
                 EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  13 vtslafspdgawlasGsdDgtvriW 37 
                 v+ l  +p+ + +a ++ D t++i+
  EPX72411.1 724 VNVLEGHPYFPTIAVSGIDSTIKIF 748
                 466668888899999999*****97 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   5.9e-07    0.0053      35      88 ..      42      96 ..       6     100 .. 0.77
   2 ?   -1.4   0.0      0.34     3e+03      51      72 ..     104     125 ..      94     142 .. 0.79
   3 ?   -1.3   0.0      0.31   2.8e+03      49      81 ..     690     722 ..     678     729 .. 0.77
   4 ?    0.1   0.0      0.11   9.9e+02      52      75 ..     735     758 ..     717     772 .. 0.76

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 5.9e-07
  ANAPC4_WD40 35 dkedsevrsLaWkpdgklLavaysdgevrlldaesg.kvvhslsvksekavtclg 88
                 + ++s +++L+W+++g+ L  + +d+++ + d+++  + +h +s+++ +++ +++
   EPX72411.1 42 SYHSSCINALNWSENGEYLLSGGDDTQLVIWDVYNNfEPLHVISTGHLHNIFSVK 96
                 567899***************************9864788888888777776665 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.34
  ANAPC4_WD40  51 klLavaysdgevrlldaesgkv 72 
                  +  + a  d+ v+l+d+e g+ 
   EPX72411.1 104 RKVMSASGDNLVKLFDVELGNS 125
                  5566788999*******98875 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 0.31
  ANAPC4_WD40  49 dgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  +++  + + +dg+  + d es+ ++  ++ +se
   EPX72411.1 690 NDEYVMSGSDDGKFFIWDKESTSILAIIQGDSE 722
                  677788899999999999999999887766655 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 0.11
  ANAPC4_WD40  52 lLavaysdgevrlldaesgkvvhs 75 
                   +av+  d+++++++ e+   +  
   EPX72411.1 735 TIAVSGIDSTIKIFSTENNPALGR 758
                  689*************99876655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (817 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       677  (0.0377601); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.69u 0.29s 00:00:00.98 Elapsed: 00:00:00.46
# Mc/sec: 5390.25
//
Query:       EPX72412.1  [L=351]
Description: phosphatidylinositol-3,4,5-trisphosphate3-phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-06   28.4   0.0    2.5e-06   27.3   0.0    1.7  2  DSPc             Dual specificity phosphatase, catalytic doma
     0.0014   18.6   0.1     0.0022   18.0   0.1    1.2  1  Y_phosphatase3   Tyrosine phosphatase family
     0.0017   18.0   0.0     0.0023   17.5   0.0    1.3  1  Y_phosphatase    Protein-tyrosine phosphatase
  ------ inclusion threshold ------
      0.017   15.2   0.0      0.026   14.6   0.0    1.3  1  PTPlike_phytase  Inositol hexakisphosphate


Domain annotation for each model (and alignments):
>> DSPc  Dual specificity phosphatase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.3   0.0   5.6e-10   2.5e-06      75     115 ..     121     161 ..      99     213 .. 0.93
   2 ?   -3.8   0.0       2.4   1.1e+04      55      80 ..     295     320 ..     283     321 .. 0.68

  Alignments for each domain:
  == domain 1  score: 27.3 bits;  conditional E-value: 5.6e-10
                 EEEEEESSSSSHHHHHHHHHHHHHHTSCHHHHHHHHHHHST CS
        DSPc  75 kvlVHCqaGisRSatliiaYlmktknlslneayeflkerrp 115
                 k +VHC+aG  R++t+ + Yl  + ++++ + +++  +rr 
  EPX72412.1 121 KLVVHCKAGKGRTGTVLCSYLVAYAGYTVVQSIDLYTKRRM 161
                 789*****************************999988874 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 2.4
                 CGGGHHHHHHHHHHHHHTT-EEEEEE CS
        DSPc  55 iskyleeavefidkakqkgkkvlVHC 80 
                 +s  +e  ++++++   ++++v++ C
  EPX72412.1 295 LSGSIEGGISYLKNWYLNNHEVFITC 320
                 55555666677777777888888888 PP

>> Y_phosphatase3  Tyrosine phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.1   4.9e-07    0.0022     117     140 ..     113     139 ..     102     157 .. 0.72

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 4.9e-07
  Y_phosphatase3 117 lad.ee..pvlfHCtaGKDRTGvlaal 140
                     l++ ++   +++HC aGK RTG +   
      EPX72412.1 113 LLTqDPlsKLVVHCKAGKGRTGTVLCS 139
                     4442347789************76543 PP

>> Y_phosphatase  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   5.2e-07    0.0023     167     194 ..     116     143 ..      59     182 .. 0.68

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 5.2e-07
                    STTSS-EEEECSSSSHHHHHHHHHHHHH CS
  Y_phosphatase 167 eaksgpvvVhCsaGvgRtgtfvaldill 194
                    ++  + +vVhC+aG gRtgt+++  +++
     EPX72412.1 116 QDPLSKLVVHCKAGKGRTGTVLCSYLVA 143
                    4467899*************88765554 PP

>> PTPlike_phytase  Inositol hexakisphosphate
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   5.8e-06     0.026     118     150 ..     107     138 ..      69     143 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 5.8e-06
                      HHHHHHHHHTS-TT-EEEEE-SSSSHHHHHHHH CS
  PTPlike_phytase 118 fdalvsilkeapektalvfnCqmGrgRTTtamv 150
                      +d++  +l + p  + lv++C++G+gRT t+++
       EPX72412.1 107 IDRMAVLLTQDP-LSKLVVHCKAGKGRTGTVLC 138
                      455554444444.889************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (351 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       346  (0.0192983); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.38
# Mc/sec: 2788.57
//
Query:       EPX72413.1  [L=1132]
Description: ribonuclease II family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.7e-43  147.5   0.2    1.6e-42  146.0   0.2    1.8  1  RNB            RNB domain
    2.9e-22   78.5   0.0    5.6e-22   77.6   0.0    1.5  1  OB_Dis3        Dis3-like cold-shock domain 2 (CSD2)
    9.2e-11   41.9   0.0    2.6e-10   40.5   0.0    1.8  1  Dis3l2_C_term  DIS3-like exonuclease 2 C terminal
    4.6e-05   23.5   0.0    0.00068   19.8   0.0    2.4  2  CSD2           Cold shock domain
  ------ inclusion threshold ------
      0.045   13.5   0.0      0.096   12.4   0.0    1.5  1  Rrp44_CSD1     Rrp44-like cold shock domain
       0.11   12.4   0.2        0.4   10.6   0.0    1.9  2  CAT            Chloramphenicol acetyltransferase


Domain annotation for each model (and alignments):
>> RNB  RNB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  146.0   0.2   5.3e-46   1.6e-42      21     324 ..     599     901 ..     584     903 .. 0.90

  Alignments for each domain:
  == domain 1  score: 146.0 bits;  conditional E-value: 5.3e-46
                 xxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxx RF
         RNB  21 DdAisieklp.ngnyelgVhIADvshyvkegspldkearkratsvyLpekvvpMLPqelsedlcSLnpgedrlalsvlidvdek.gevlsveiylsvIk 117
                 D Ai+i   p +g + lg h++Dv++ +k++ p+d+ea++r   v L + +vp+LP++++e+ +SL  g d+l++s++i++d k  +vl+ + ++svI+
  EPX72413.1 599 DYAIHIDTGPsEGVIILGFHVTDVASSIKQDMPIDDEAANRVAQVQLLQGSVPFLPKKVTEE-VSLTTGHDCLTISIVIQLDLKsETVLQCSLGPSVIR 696
                 56****888866699**********************************************9.7********************6668*********** PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RNB 118 skarltydevqdlleqkdekeekktaedLellyelakalrkkRlkk.galefdspeikllldedkgnrie...lkveeetkahslveelmllANelvAr 212
                 ++ +++ + +q+ +         ++ e L+ll + ak+l k Rl++ + +++ +p + + + +d+ ++i+   ++v e       ++++    Ne +A+
  EPX72413.1 697 PSSYISLETAQANI---------QSNEALQLLEKSAKVLTKLRLQTkEDVDL-QPLYCFGFLDDQLRSIQelnMNVFEAYPVVCSLQQIEHWINEKTAS 785
                 **************.........68899*****************9888888.577777777766644443337777777777778999999******* PP

                 xx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxx RF
         RNB 213 fl.seleipailriheepsnekledliklakklglklednsskknlqeslekleeeeaeqllselllrllkeakyssep.....vgHfgLaleeYthfT 305
                 +l s ++ +++lr    ps  +l+  i+ a++ g+ l+ +ss +++  +l ++++++ ++ll+ +l rl +e++y +       v Hf+ a + Ythf+
  EPX72413.1 786 HLmSIFPNKVVLRKNARPS--NLDAAIRAARRAGFPLTAESSSTDFMAALATTKDKNLQRLLQLSLKRLSSESEYTVGIsndkdVSHFAFASPCYTHFC 882
                 **9************8887..9**************99999999********************************65566778*************** PP

                 xxxxxxxxxxxxxxxxxxx RF
         RNB 306 SPirRYpDlvvhrllkall 324
                  P rRY D+ v+r+l+++ 
  EPX72413.1 883 HPTRRYIDICVQRQLHEAF 901
                 ****************986 PP

>> OB_Dis3  Dis3-like cold-shock domain 2 (CSD2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.6   0.0   1.9e-25   5.6e-22       2      76 ..     480     554 ..     479     555 .. 0.98

  Alignments for each domain:
  == domain 1  score: 77.6 bits;  conditional E-value: 1.9e-25
                 EEE--SSTTS--EEEETTSSTTTHHHHTTTTTT--EEEEE----TT-SS-EEEEEEE-HHHHHHHHHHHHHHHHT CS
     OB_Dis3   2 vlfkPldkrlPriliptkelpeeflenpeelegklfvvkidsWsetsryPlGeivksLGeagdieaeteaiLlen 76 
                 v+fkP dkr+P i i ++++p++f++n +e++++ f++ i++W++ts +P+G++ +s+G++gd ++e  aiL ++
  EPX72413.1 480 VWFKPSDKRIPLIAISSDQVPPKFFTNNDEFKDQVFLAGIKRWPTTSLHPFGTLYESIGKVGDSNVEFTAILHDY 554
                 9***********************************************************************997 PP

>> Dis3l2_C_term  DIS3-like exonuclease 2 C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.5   0.0   8.8e-14   2.6e-10       1      63 [.     952    1015 ..     952    1039 .. 0.82

  Alignments for each domain:
  == domain 1  score: 40.5 bits;  conditional E-value: 8.8e-14
  Dis3l2_C_term    1 GpleekavVvnVldssfDVlileyGlekRVyldklplkefefdk.tkvLtLyWkkdvpeaevvq 63  
                     G ++ k+ V++  +s++D +++e+Gle+R+yld lpl++++f++ t+ L+  W+k +p+  + +
     EPX72413.1  952 GLIQLKGFVIATDQSFIDLVVYELGLERRIYLDLLPLNSCDFNDqTEELSFSWRKSSPSFYYAT 1015
                     668889************************************854888*****99998773333 PP

>> CSD2  Cold shock domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.19   5.8e+02      13      37 ..     315     340 ..     307     371 .. 0.79
   2 !   19.8   0.0   2.3e-07   0.00068      24      69 ..     510     556 ..     481     562 .. 0.70

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.19
        CSD2  13 ifip.keklkgakdGdkVvveiteyp 37 
                 ifi   ++++   +Gd+V ve+++  
  EPX72413.1 315 IFICgSKDRNRTLEGDLVAVELLDVN 340
                 66554677888999*******88754 PP

  == domain 2  score: 19.8 bits;  conditional E-value: 2.3e-07
        CSD2  24 kdGdkVvveiteypdk.knpeGevievLGkkgdpgveilsilakhgl 69 
                  ++++ ++ i+++p+   +p G+  e++Gk gd +ve  +il+ +  
  EPX72413.1 510 FKDQVFLAGIKRWPTTsLHPFGTLYESIGKVGDSNVEFTAILHDYSC 556
                 347788899*****75246************************9975 PP

>> Rrp44_CSD1  Rrp44-like cold shock domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   3.2e-05     0.096      17      74 ..     284     341 ..     270     347 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 3.2e-05
                 HHTTSEEEEEEEEESSBTTEEEEE-SSSSS-EEEESHHHHTS--TT-EEEEEE--GGG CS
  Rrp44_CSD1  17 lkngvlyqgniqiseynflegsvslprfskpvlivgqknlnrafngdqvivellpqse 74 
                 +  g l  g ++i   n  +  v    +   ++i g k+ nr+++gd v vell   e
  EPX72413.1 284 ISTGRLLVGTLHINRKNRSDAYVITDALDDYIFICGSKDRNRTLEGDLVAVELLDVNE 341
                 5678899999999999*************************************98766 PP

>> CAT  Chloramphenicol acetyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00013       0.4      19     106 ..     811     901 ..     793     931 .. 0.80
   2 ?   -1.6   0.1      0.72   2.2e+03      88     127 ..     993    1032 ..     980    1040 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00013
         CAT  19 lkvvkctysltvelditalkkeikkkklkvypaliyllarvvnkhkefrmalkde.elvvWdsvnPaytvfnketetfssiwt..eydedf 106
                 +   ++++ lt+e   t++ +++  +k k    l+ l  + +   +e+ ++++++ ++ ++    P+yt f + t+++  i    + +e f
  EPX72413.1 811 RAARRAGFPLTAESSSTDFMAALATTKDKNLQRLLQLSLKRLSSESEYTVGISNDkDVSHFAFASPCYTHFCHPTRRYIDICVqrQLHEAF 901
                 4566899******************************99*************99989***************9999997665411344444 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.72
         CAT   88 fnketetfssiwteydedfaeflktyaediaeysektklf 127 
                  fn++te +s  w +++++f    ++ + d ++ys+ +k f
  EPX72413.1  993 FNDQTEELSFSWRKSSPSFYYATSSLEIDSTCYSNFKKKF 1032
                  8999999999999999999888888888888888766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1132 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       535  (0.0298399); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.71u 0.26s 00:00:00.97 Elapsed: 00:00:00.42
# Mc/sec: 8185.36
//
Query:       EPX72414.1  [L=99]
Description: 60S ribosomal protein L36 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.7e-40  137.2   3.1    1.9e-40  137.0   3.1    1.0  1  Ribosomal_L36e  Ribosomal protein L36e
  ------ inclusion threshold ------
      0.011   15.8   0.0      0.013   15.6   0.0    1.1  1  TetR_C_9        Tetracyclin repressor-like, C-terminal domain


Domain annotation for each model (and alignments):
>> Ribosomal_L36e  Ribosomal protein L36e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.0   3.1   2.1e-44   1.9e-40       3      95 ..       4      96 ..       2      97 .. 0.98

  Alignments for each domain:
  == domain 1  score: 137.0 bits;  conditional E-value: 2.1e-44
  Ribosomal_L36e  3 glavglnkGhkvtknvsklrpsrrkgrltkrtkfvrdiirevaGfapyerrvmellkvskdKralKfaKkrlgthirakrKreelsnvlaamr 95
                    gl+vglnkG   tk++   rpsrrkg+++krt+fvr+i+revaGfapyerrvmel+++s+dKra+K+aKkrlgt++rak K+eel+ v++++r
      EPX72414.1  4 GLVVGLNKGKALTKRQLPERPSRRKGQQSKRTTFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAKKRLGTLKRAKGKIEELTGVIQSSR 96
                    789**************************************************************************************9987 PP

>> TetR_C_9  Tetracyclin repressor-like, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.6   0.0   1.5e-06     0.013      23      60 ..      50      86 ..      31      96 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 1.5e-06
                TTHHHHHHHHHHHS-HHHHHHHHHHHTHHHHHHHHHHH CS
    TetR_C_9 23 pylyrllaalvrdadeeeakdiadfyllplaraaqrli 60
                py  r ++ l+r+++++ a+++a+  l  l+ra  ++ 
  EPX72414.1 50 PY-ERRVMELIRNSQDKRARKLAKKRLGTLKRAKGKIE 86
                45.57789************************987654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       704  (0.039266); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.27s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 723.31
//
Query:       EPX72415.1  [L=412]
Description: DNAJ protein Xdj1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.1e-30  103.9   0.0    1.1e-29  103.5   0.0    1.2  1  DnaJ_C         DnaJ C terminal domain
    2.3e-20   72.5   0.6      4e-20   71.7   0.6    1.4  1  DnaJ           DnaJ domain
    2.9e-12   46.8  16.1    5.1e-12   46.0  16.1    1.4  1  DnaJ_CXXCXGXG  DnaJ central domain
  ------ inclusion threshold ------
       0.16   12.0   8.5       0.71    9.9   0.4    2.9  2  Anti-TRAP      Tryptophan RNA-binding attenuator protein inhi
          2    8.5   5.7        6.9    6.7   1.3    2.4  2  HypA           Hydrogenase/urease nickel incorporation, metal


Domain annotation for each model (and alignments):
>> DnaJ_C  DnaJ C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.5   0.0     3e-33   1.1e-29       4     148 .]     121     342 ..     118     342 .. 0.93

  Alignments for each domain:
  == domain 1  score: 103.5 bits;  conditional E-value: 3e-33
                 EEEE-HHHHHH-.EEE.EEEE............................................................................TE CS
                 xxxxxxxxxxxxxxxxxxxxxxxx.....................................................................xxxxxx RF
      DnaJ_C   4 eleisleelykGktkkikikrnvi.....................................................................kkekkt 33 
                 + eisle+++kGk+ k++ +rnvi                                                                     + ek++
  EPX72415.1 121 DYEISLEDMFKGKEVKLRATRNVIcphcygkggkrfakersclscdgkgmrqhlhrvgphhvttqqsacedcngkgsafrtkdrckyckgsgvVGEKRV 219
                 789*****************************************************************************************7666669 PP

                 EEEEE-TT--TT-EEEETT-SSSS...S---EEEEEEE---SS-EEETTEEEEEEEEEHHHHHHT.EEE.EEE-SS-EEEE......EE--TT-EEEET CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxx.xxxxxxxxxxx......xxxxxxxxxxxx RF
      DnaJ_C  34 levkipaGikdgqkirlegeGdeeg.gepGDlivtikvkphpvFkrkgndlyveveislaeallG.gkl.evptldgkvkl......kitqpgevlrik 123
                 l++ i +  k+ +k++ ++++de   + pGD+++++++ phpvF+r g+dl  +++islaeal+G +    + tldg++        ki++pg+ ++i+
  EPX72415.1 220 LNFYIRRSAKETDKVVQPEMADEALgMTPGDVVLRLRQIPHPVFERFGDDLKAKLHISLAEALVGfK-RaIITTLDGRTLEyhqpagKILRPGDCIVIP 317
                 **********************7666***********99**************************54.4366677665543577889************ PP

                 T-S-EET...TEE--EEEEEEEE-- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx RF
      DnaJ_C 124 gkGmpklkkpgkrGdlyvevkvefP 148
                 g+Gm + ++++ rGdly+ev++efP
  EPX72415.1 318 GEGMYRGDRTDLRGDLYLEVEIEFP 342
                 ************************9 PP

>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.7   0.6   1.1e-23     4e-20       2      63 .]       7      70 ..       6      70 .. 0.94

  Alignments for each domain:
  == domain 1  score: 71.7 bits;  conditional E-value: 1.1e-23
                HHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHH..HHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ  2 yYeiLgvskdasedeIkkaYrklalkyHPDknpkdp..eaeekFkeineAyevLsdpekRkqYD 63
                +Y+iL+v+++as++eIkk+Y+klal  HPDk ++++  +a+ +F+ i++Ay+vL +p +R++YD
  EPX72415.1  7 LYDILEVDPTASAEEIKKRYKKLALLNHPDKVAESEreDAAARFRDIQTAYDVLREPGSREMYD 70
                8*****************************985555569999*********************9 PP

>> DnaJ_CXXCXGXG  DnaJ central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.0  16.1   1.4e-15   5.1e-12       1      67 []     145     212 ..     145     212 .. 0.87

  Alignments for each domain:
  == domain 1  score: 46.0 bits;  conditional E-value: 1.4e-15
  DnaJ_CXXCXGXG   1 CkkCkGsgakk.gkkktCktCkGsGvvreeqktlgp.fvqqsqstCpeCeGtGkvikekdkCkkCkGkg 67 
                    C++C G+g k+ +k+++C +C+G+G+  ++ +++gp  v+++qs C++C+G+G+ +++kd+Ck CkG+g
     EPX72415.1 145 CPHCYGKGGKRfAKERSCLSCDGKGMR-QHLHRVGPhHVTTQQSACEDCNGKGSAFRTKDRCKYCKGSG 212
                    ********998777999********53.3333488888889999***********************86 PP

>> Anti-TRAP  Tryptophan RNA-binding attenuator protein inhibitory protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   2.6     0.011        39      12      40 ..     144     169 ..     140     175 .. 0.76
   2 ?    9.9   0.4    0.0002      0.71      11      42 ..     187     214 ..     183     226 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.011
                 E-TTTTTTSEETTE......E-TTTTTSS CS
   Anti-TRAP  12 kCdaCngsGkiepeeprasleCPkCsGkg 40 
                  C++C g G    +++r+   C  C Gkg
  EPX72415.1 144 ICPHCYGKGGKRFAKERS---CLSCDGKG 169
                 699999999888886664...66677776 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.0002
                 EE-TTTTTTSEETTE......E-TTTTTSSEE CS
   Anti-TRAP  11 tkCdaCngsGkiepeeprasleCPkCsGkgli 42 
                  +C+ Cng G +  +       C  C+G g++
  EPX72415.1 187 SACEDCNGKGSAFRT----KDRCKYCKGSGVV 214
                 58********99888....557********97 PP

>> HypA  Hydrogenase/urease nickel incorporation, metallochaperone, hypA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.2     0.023        81      68      97 ..     140     170 ..     119     175 .. 0.67
   2 ?    6.7   1.3    0.0019       6.9      69      97 ..     185     213 ..     179     221 .. 0.81

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.023
                 --EEEETTTS-EEECHHH.HHS-TTTSSS-E CS
        HypA  68 pvkvrCreCgkefeleek.alrCpkCgsadv 97 
                   +v C +C  ++ ++ + + +C +C+++++
  EPX72415.1 140 TRNVICPHCYGKGGKRFAkERSCLSCDGKGM 170
                 3467899998777655433678999988765 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0019
                 -EEEETTTS-EEECHHHHHS-TTTSSS-E CS
        HypA  69 vkvrCreCgkefeleekalrCpkCgsadv 97 
                  +  C++C+ +++  +++ rC+ C++++v
  EPX72415.1 185 QQSACEDCNGKGSAFRTKDRCKYCKGSGV 213
                 5678*****99996654679****99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (412 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       668  (0.0372581); expected 358.6 (0.02)
Passed bias filter:                      513  (0.0286129); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 3199.97
//
Query:       EPX72416.1  [L=147]
Description: hypothetical protein SOCG_00179 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-10   41.2  13.3    3.7e-07   30.6  13.3    2.1  1  ATG16     Autophagy protein 16 (ATG16)
     0.0044   15.9   0.1        1.7    7.3   0.1    2.1  2  DUF4432   Domain of unknown function (DUF4432)


Domain annotation for each model (and alignments):
>> ATG16  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.6  13.3   4.1e-11   3.7e-07       2     173 ..       6     143 ..       5     145 .. 0.75

  Alignments for each domain:
  == domain 1  score: 30.6 bits;  conditional E-value: 4.1e-11
       ATG16   2 ilaqLreRdarqekafaeliqaynrLldrtsaleaenaklekaaasakssksskksakekeasasqsnskqsakiqsleqklaqlreelaelyksrgel 100
                 ++++L+ Rd r eka+ ++i+ y++L+  t +l+++  + +++ +s+               +      +  a +++++  l+++ +el  l++++   
  EPX72416.1   6 LVERLKWRDSR-EKAYVQVIEPYTELFHTTLSLDQREPNVNEKDSSND-------------HE------TFPAGLNAPAMSLQAMADELRSLQRTCDLY 84 
                 789*******9.************************999933322211.............12......234567777888888888888888877766 PP

       ATG16 101 aqrllelneelqkleeklkedeerlaeleaeraaletklkdreeelrekeklvqdlqDElsaLqlqlnqaEek 173
                 +   ++++               + ++  +e++ le++l+ ++e   ek+k ++ lqDEl aLql++ ++E k
  EPX72416.1  85 QRNMQKAQ--------------FTCKQKLQENSLLEKQLSLQKELNVEKDKRIHLLQDELWALQLEVASLERK 143
                 65544444..............444455667788888888889999999999999999999999999998876 PP

>> DUF4432  Domain of unknown function (DUF4432)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.0    0.0003       2.6     253     276 ..      10      33 ..       5      51 .. 0.84
   2 !    7.3   0.1   0.00019       1.7     106     150 ..      86     130 ..      78     137 .. 0.88

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0003
                 EEEEEES-T-EEEEEEEESS-SS- CS
     DUF4432 253 tlWkntgageYvlGlEPstnfllg 276
                  +W++ ++++Yv  +EP t+  + 
  EPX72416.1  10 LKWRDSREKAYVQVIEPYTELFHT 33 
                 58****************987655 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.00019
                 ESSTT--EEEEEEEEEEETTTEEEEEEEEEEE-TT-SEEEEEEEE CS
     DUF4432 106 eeegkleievtGevkeaalfgenlelereislelgeaeleveDev 150
                  + +k +++++ +++e++l  ++l+l++e+++e +++   ++De+
  EPX72416.1  86 RNMQKAQFTCKQKLQENSLLEKQLSLQKELNVEKDKRIHLLQDEL 130
                 456788999***************************999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1208  (0.0673769); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1019.62
//
Query:       EPX72417.1  [L=205]
Description: GTPase Ypt7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.2e-58  195.2   0.3    6.1e-58  195.0   0.3    1.0  1  Ras              Ras family
    6.1e-33  113.6   0.0    9.6e-33  113.0   0.0    1.3  1  Roc              Ras of Complex, Roc, domain of DAPkinase
    1.6e-12   47.2   0.0    1.8e-12   47.1   0.0    1.1  1  Arf              ADP-ribosylation factor family
    1.6e-07   31.0   0.0    1.9e-07   30.7   0.0    1.1  1  Gtr1_RagA        Gtr1/RagA G protein conserved region
    3.5e-07   30.3   0.0    5.5e-07   29.7   0.0    1.3  1  MMR_HSR1         50S ribosome-binding GTPase
    4.4e-06   26.4   0.1    4.4e-05   23.1   0.1    2.1  1  GTP_EFTU         Elongation factor Tu GTP binding domain
    5.9e-05   23.0   0.4     0.0012   18.6   0.0    2.0  2  ATP_bind_1       Conserved hypothetical ATP binding protein
    0.00029   20.8   0.3       0.01   15.7   0.1    2.4  3  RsgA_GTPase      RsgA GTPase
     0.0035   16.9   0.1     0.0064   16.0   0.1    1.4  1  AAA_7            P-loop containing dynein motor region
     0.0039   17.5   0.0      0.021   15.1   0.0    2.0  2  AAA_22           AAA domain
     0.0052   16.2   0.0     0.0068   15.9   0.0    1.3  1  SRPRB            Signal recognition particle receptor beta su
     0.0068   16.8   0.0      0.011   16.1   0.0    1.6  1  AAA_16           AAA ATPase domain
     0.0073   16.0   0.1      0.035   13.8   0.0    2.0  2  AAA_24           AAA domain
  ------ inclusion threshold ------
      0.011   15.1   0.2      0.045   13.0   0.1    1.9  2  Septin           Septin
      0.014   14.6   1.1       0.27   10.3   0.2    2.3  2  G-alpha          G-protein alpha subunit
      0.015   15.0   0.1       0.55   10.0   0.1    2.2  2  PduV-EutP        Ethanolamine utilisation - propanediol utili
       0.02   14.5   0.1      0.079   12.5   0.0    1.8  2  cobW             CobW/HypB/UreG, nucleotide-binding domain
      0.031   13.7   0.0      0.049   13.1   0.0    1.3  1  TniB             Bacterial TniB protein
      0.055   13.9   0.1       0.44   11.0   0.0    2.2  2  RNA_helicase     RNA helicase
      0.064   13.2   0.0       0.11   12.4   0.0    1.4  1  NTPase_1         NTPase
       0.08   12.9   0.0       0.18   11.8   0.0    1.6  2  AAA_5            AAA domain (dynein-related subfamily)
      0.096   11.8   0.1       0.15   11.2   0.1    1.3  1  DAP3             Mitochondrial ribosomal death-associated pro
      0.096   12.4   0.1       0.15   11.7   0.1    1.3  1  Sigma54_activat  Sigma-54 interaction domain
       0.12   12.3   0.8       0.17   11.7   0.1    1.5  2  ATPase_2         ATPase domain predominantly from Archaea
       0.12   11.6   0.1       0.18   10.9   0.1    1.4  1  NB-ARC           NB-ARC domain
       0.23   12.0   0.6       0.33   11.5   0.6    1.7  1  ABC_tran         ABC transporter


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  195.0   0.3   8.9e-61   6.1e-58       1     160 [.      10     175 ..      10     177 .. 0.97

  Alignments for each domain:
  == domain 1  score: 195.0 bits;  conditional E-value: 8.9e-61
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeikr 99 
                 K++++G+s+vGKts+++++v++kF+++y++Tig+df+tke+ vd+k v+l++wDTAGqe+f+sl  ++yr+a++++lvyd+++++sfe++++w +e+  
  EPX72417.1  10 KVIILGESGVGKTSIMNQYVNKKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLI 108
                 99***********************************************************************************************99 PP

                 HST....TTSEEEEEEETTTGGG.G-SS-HHHHHHHHHHHT.SEEEEEBTTTTCTHHHHHHHHHHHH CS
         Ras 100 vae....envpivLvGnKvDlee.kravsteegeelakelg.lkfletSAktnenveeafeellrei 160
                 +a+    e++p++L+GnKvD+ee kr+vs++++++++++ g ++++etSAk++ nv+eaf++++r +
  EPX72417.1 109 QASpsnpETFPFILIGNKVDVEEkKRMVSKSKAQAYCQDRGeIPYFETSAKEAVNVQEAFQTVARLA 175
                 999999999************986899************999*********************9976 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.0   0.0   1.4e-35   9.6e-33       1     119 [.      10     128 ..      10     129 .. 0.86

  Alignments for each domain:
  == domain 1  score: 113.0 bits;  conditional E-value: 1.4e-35
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE...GHHHHCHH CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd...srssenlk 96 
                 Kv+++G+sgvGKts+++++v++kfs+++k+tig+dfltkev  +     d+  k v+l++WDtaGqerf+sl   ++r+a++++lvyd   s+s+e+l+
  EPX72417.1  10 KVIILGESGVGKTSIMNQYVNKKFSKDYKATIGADFLTKEVL-V-----DD--KVVTLQLWDTAGQERFQSLGVAFYRGADCCVLVYDvnnSKSFETLD 100
                 9**************************************983.2.....23..5699*******************************8766678999* PP

                 HHHHHHHHHCS.SS....-EEEEEE-TT CS
         Roc  97 eWlkelkkvag.ks....pvilvgnkiD 119
                 +W +e+  +a+ ++    p+il+gnk+D
  EPX72417.1 101 SWRDEFLIQASpSNpetfPFILIGNKVD 128
                 ***99865554222233579*******9 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.1   0.0   2.6e-15   1.8e-12      12     171 ..       6     171 ..       1     175 [. 0.76

  Alignments for each domain:
  == domain 1  score: 47.1 bits;  conditional E-value: 2.6e-15
                 TTEEEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSSEE..EEEEEE..TTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHHHH CS
         Arf  12 kkelrilllGLDnaGKtTilkklkleelvt.tvPTigfn..veelei..knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLk 105
                 k+ l++++lG  + GKt i++++ ++++++  + Tig +  ++e+ +  k +++++wD  Gqe+  +l   +++  d  + v D+++++ +e+  +  +
  EPX72417.1   6 KHLLKVIILGESGVGKTSIMNQYVNKKFSKdYKATIGADflTKEVLVddKVVTLQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRD 104
                 44579*********************9987588999965115666555588**********************************99998887776666 PP

                 HHCTS...GCCTTSEEEEEEE-TTSTTSS-HHHHHHHTTGGGSSSSSSEEEEEEBTTTTBTHHHHHHHH CS
         Arf 106 allee...eelkevallvlaNKqDlpealseeelrellgleelkgkrkleiqkcsavkgeglkeglewl 171
                 ++l +   ++ ++ ++++++NK D++e      ++++ +    + + ++  +++sa +  +++e+++ +
  EPX72417.1 105 EFLIQaspSNPETFPFILIGNKVDVEEKKRM--VSKSKAQAYCQDRGEIPYFETSAKEAVNVQEAFQTV 171
                 65544011455699***********987654..444444444444456667777777777777777665 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.7   0.0   2.8e-10   1.9e-07       1     141 [.      10     145 ..      10     175 .. 0.68

  Alignments for each domain:
  == domain 1  score: 30.7 bits;  conditional E-value: 2.8e-10
   Gtr1_RagA   1 kvLLmGksgsGKtsmrs.iiFdnylardtlrlgatidveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDvesreleedletl 98 
                 kv+++G+sg GKts+ +  + ++++     ++ga   +++  v   + +tl+lwD  Gqe+f+   +   +     ++ vl+   Dv++++  e+l+++
  EPX72417.1  10 KVIILGESGVGKTSIMNqYVNKKFSKDYKATIGADFLTKEVLV-DDKVVTLQLWDTAGQERFQSLGVAFYR---GADCCVLV--YDVNNSKSFETLDSW 102
                 89************76515555555555566776665555555.56778*************988644433...34555655..599988877777777 PP

   Gtr1_RagA  99 k.eilealrqyspeakvfvli.hKmDliqedereeifeerkeeir 141
                 + e l +++  +pe   f+li +K+D   e+ ++ + +++++ + 
  EPX72417.1 103 RdEFLIQASPSNPETFPFILIgNKVDVE-EK-KRMVSKSKAQAYC 145
                 526788999999***99***97799975.33.3444444444333 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   0.0     8e-10   5.5e-07       1     103 [.      10     105 ..      10     126 .. 0.63

  Alignments for each domain:
  == domain 1  score: 29.7 bits;  conditional E-value: 8e-10
                 EEEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEETT..EEEEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEETTTTCSHHHHHHH CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvklkg..keielvDtpGliegaseekglgkaflaleeadlillvvdaseeklkpldeel 97 
                 +v+i+G + vGK++++n+ +++k     k+    d  +++v +++    ++l+Dt+G  e   + ++lg af +   ad  +lv d++++  k   e+l
  EPX72417.1  10 KVIILGESGVGKTSIMNQYVNKKFSKDYKATIGADFLTKEVLVDDkvVTLQLWDTAG-QE---RFQSLGVAFYR--GADCCVLVYDVNNS--KSF-ETL 99 
                 699******************97655555555555555544433324789*******.54...44489999996..57888888886622..222.455 PP

                 HHHHHH CS
    MMR_HSR1  98 eellee 103
                  ++++e
  EPX72417.1 100 DSWRDE 105
                 555443 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.1   6.4e-08   4.4e-05      66     190 ..      53     173 ..       6     177 .. 0.77

  Alignments for each domain:
  == domain 1  score: 23.1 bits;  conditional E-value: 6.4e-08
                 TCSSEEEEEEEESSSGGGHHHHHHHHHT-SEEEEEEETTTBSTHHHHHHHH.....HHHHTTTE...EEEEEESCGSTHHHHHHHHHHHHHHHHHHHHH CS
    GTP_EFTU  66 etkkylinliDtPGHvdFskevirglrvlDgavlvvdaveGvepqteevlr.....lalkegvp...iivfiNKmDrlkaelkeiveevkqklsrkeek 156
                 + k  +++l Dt G + F++   + +r +D++vlv d+++     t   +r     +a+  + +   +i++ NK+D  +++   ++++++         
  EPX72417.1  53 DDKVVTLQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRdefliQASPSNPEtfpFILIGNKVDVEEKKRMVSKSKAQ--------- 142
                 4667789999*****************************997777765554322226665544344499999****87666555555555......... PP

                 HHHHHHTTTTTEEEEEEBTTTTBTHHHHHHHHHH CS
    GTP_EFTU 157 lekygekgekevpvvfgSalkgegvktllealve 190
                   +y +++  e+p + +Sa+++ +v++ ++++ +
  EPX72417.1 143 --AYCQDR-GEIPYFETSAKEAVNVQEAFQTVAR 173
                 ..344555.48999*********99999988876 PP

>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.1      0.11        76       1      17 [.      13      29 ..      13      41 .. 0.81
   2 !   18.6   0.0   1.8e-06    0.0012      71     233 ..      42     190 ..      33     197 .. 0.77

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.11
  ATP_bind_1  1 vvGpaGsGKttfvgals 17
                ++G  G+GKt+++++ +
  EPX72417.1 13 ILGESGVGKTSIMNQYV 29
                689*********99865 PP

  == domain 2  score: 18.6 bits;  conditional E-value: 1.8e-06
  ATP_bind_1  71 aleflresldwldeelekeeddyllfDtPGQielfthseslakiveeLesefalvvvyLvDsqrltd...ptkfisgllsalsamlrlelPhvvvlnkf 166
                  ++fl++++  +d+++      + l Dt GQ ++  +  +          ++a ++v + D++ +++     ++ ++ l+  s       P++ + nk+
  EPX72417.1  42 GADFLTKEV-LVDDKV----VTLQLWDTAGQERFQSLGVAFY--------RGADCCVLVYDVNNSKSfetLDSWRDEFLIQASPSNPETFPFILIGNKV 127
                 456666665.444444....4899*********999998888........9*************999776678999999******************** PP

  ATP_bind_1 167 Dllkeklekeleffedvealslllekee.ekykklaeaiaelleefalvlrflplssekeesiedlls 233
                 D+ +     +  +++  +a  + ++  e  +++++a++ +++ e f+ v r+   +s+ e+++ d+ +
  EPX72417.1 128 DVEE-----KKRMVSKSKAQAYCQDRGEiPYFETSAKEAVNVQEAFQTVARLALENSDAEDAAGDFAD 190
                 **55.....33333334444444554446888888888888888888888888888888888777765 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.1   1.5e-05      0.01     102     122 ..      11      31 ..       5      54 .. 0.86
   2 ?   -0.7   0.0       1.7   1.2e+03      57      96 ..      63     102 ..      45     111 .. 0.73
   3 ?    2.6   0.0      0.16   1.1e+02      37      91 ..     105     165 ..      81     175 .. 0.61

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1.5e-05
                  EEEECSTTSSHHHHHHHHCTT CS
  RsgA_GTPase 102 svlvGqSGvGKStLinallpe 122
                  ++++G+SGvGK++++n+ +++
   EPX72417.1  11 VIILGESGVGKTSIMNQYVNK 31 
                  6899************99876 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 1.7
                  GG--HHHHHHHHHHHHHHTTSEEEE--TTTHTTHHHHHHH CS
  RsgA_GTPase  57 Dlleeeeeleelkeelealgyevllvsaktkegleelkel 96 
                  D + +e+  +   + ++ +++ vl+ ++++++++e+l ++
   EPX72417.1  63 DTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSW 102
                  5555555333345678899999999999999999999876 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.16
                  HHHHHHHHTT-...EEEEEEE-GGG--HHH...HHHHHHHHHHHTTSEEEE--TTTHTTHH CS
  RsgA_GTPase  37 rfLvlaeekgi...epvivlnKiDlleeee...eleelkeelealgyevllvsaktkegle 91 
                   fL++a  ++    + +++ nK+D+ e+++   + ++++    + +++ + +sak+  +++
   EPX72417.1 105 EFLIQASPSNPetfPFILIGNKVDVEEKKRmvsKSKAQAYCQDRGEIPYFETSAKEAVNVQ 165
                  566666554431114556669****999995532333333334445777777777666555 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.1   9.2e-06    0.0064      34      63 ..       9      38 ..       4      48 .. 0.77

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 9.2e-06
       AAA_7 34 kpvllvGptGtGKtviikdllkkldkekyl 63
                 +v++ G++G+GKt+i++++++k  +++y+
  EPX72417.1  9 LKVIILGESGVGKTSIMNQYVNKKFSKDYK 38
                57999**************66655545554 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   3.1e-05     0.021       8      30 ..      11      33 ..       5     102 .. 0.79
   2 ?   -0.0   0.0       1.4   9.7e+02     108     134 ..      95     130 ..      86     132 .. 0.67

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 3.1e-05
      AAA_22  8 lvvtGesGtGKTtllrrlleqld 30
                +++ GesG+GKT  ++++++++ 
  EPX72417.1 11 VIILGESGVGKTSIMNQYVNKKF 33
                5899**************99863 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 1.4
      AAA_22 108 aleeLrsllnl........srkgvqliLvGtp.elr 134
                  +e+L s+ +         +   +++iL+G   +++
  EPX72417.1  95 SFETLDSWRDEfliqaspsNPETFPFILIGNKvDVE 130
                 566665554444444555568899999999876665 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   9.9e-06    0.0068       5      64 ..      10      72 ..       6     143 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 9.9e-06
                EEEEE-STTSSHHHHHHHHHHSS---B---S..S-EEETTG....GGTT-SEEEETT-GCCSH CS
       SRPRB  5 avllvGlsdsGKTslftrLttdsvkktvtSq..essaalkv.ksekgskltliDfPGheklrq 64
                +v+++G s  GKTs++++  ++++ k + +   +  ++++v  ++k  +l+l D  G+e++++
  EPX72417.1 10 KVIILGESGVGKTSIMNQYVNKKFSKDYKATigADFLTKEVlVDDKVVTLQLWDTAGQERFQS 72
                69********************9988887665555666666577788899999****999864 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   1.6e-05     0.011      27      52 ..      11      54 ..       2     190 .. 0.67

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.6e-05
      AAA_16 27 vllsGesGvGKsslv.rellralekd.................g 52
                v++ GesGvGK+s++ + + + ++kd                 +
  EPX72417.1 11 VIILGESGVGKTSIMnQYVNKKFSKDykatigadfltkevlvdD 54
                89*************54555677777555554444444444431 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.0     5e-05     0.035       4      23 ..      10      30 ..       8      68 .. 0.85
   2 ?   -0.3   0.0       1.1   7.4e+02     152     176 ..     156     180 ..     127     201 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 5e-05
      AAA_24  4 kiliyGpsgiGKTtlakel.g 23
                k++i G+sg+GKT++++++  
  EPX72417.1 10 KVIILGESGVGKTSIMNQYvN 30
                89***************9942 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 1.1
      AAA_24 152 lgkktanelkeevDlvlranlkred 176
                  + k a +++e + +v+r+ l+ +d
  EPX72417.1 156 TSAKEAVNVQEAFQTVARLALENSD 180
                 3455568899999999999988766 PP

>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   6.5e-05     0.045       5      37 ..       9      41 ..       5      67 .. 0.73
   2 ?   -0.4   0.0      0.82   5.6e+02     186     220 ..     102     136 ..      87     145 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 6.5e-05
                EEEEEEEBTTSSCCCCCCTTSSSS--------- CS
      Septin  5 ftlmvvGesglGkttlintlfetdlieeeklee 37
                + +++ Gesg+Gkt+++n  ++++  ++ k + 
  EPX72417.1  9 LKVIILGESGVGKTSIMNQYVNKKFSKDYKATI 41
                689******************999988754443 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.82
                 S-SCCHHHHHHHHHHC-SEEB-SSSSEEEESSSEE CS
      Septin 186 dedeeakelseklkeslPfaivgsneliekkgkkv 220
                   de   ++s +  e++Pf ++g +  +e+k ++v
  EPX72417.1 102 WRDEFLIQASPSNPETFPFILIGNKVDVEEKKRMV 136
                 44555666666777889999999999998877766 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.2   0.00039      0.27      19      54 ..       4      36 ..       1      51 [. 0.77
   2 ?    3.3   0.1     0.054        37     268     299 ..     116     149 ..      38     181 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00039
                XE..EEEEEEEESTTSSHHHHHHHHHHHCS----HH CS
     G-alpha 19 kkkrevkllllGqseSGKsTilkqlkllykkgfsee 54
                +kk  +k+++lG+s+ GK++i++q     +k+fs++
  EPX72417.1  4 RKKHLLKVIILGESGVGKTSIMNQYV---NKKFSKD 36
                556789*****************976...5666655 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.054
                 TTSEEEEEEE-HHHHHHHC..CCS-GGGCCTT-- CS
     G-alpha 268 kntpiiLflnKlDileeKl..kkgklskyfpsye 299
                 ++ p+iL+ nK+D+ e+K   +k+k + y ++ +
  EPX72417.1 116 ETFPFILIGNKVDVEEKKRmvSKSKAQAYCQDRG 149
                 5678999999999988886434446666654444 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.1    0.0008      0.55       3      32 ..      10      41 ..       8      53 .. 0.76
   2 ?    3.0   0.0      0.11        78      93     140 ..     121     170 ..     103     173 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.0008
   PduV-EutP  3 killiGkvgsGKttLtqalkgeelk..Ykktq 32
                k++++G++g+GKt+++++  +++++  Yk t 
  EPX72417.1 10 KVIILGESGVGKTSIMNQYVNKKFSkdYKATI 41
                89************998877766542366665 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.11
   PduV-EutP  93 iGiitkidlaedeenieaveel..LksaGaekifevsavekegieellky 140
                 i i  k+d+ e++  +++++ +   +  G    fe+sa e ++++e ++ 
  EPX72417.1 121 ILIGNKVDVEEKKRMVSKSKAQayCQDRGEIPYFETSAKEAVNVQEAFQT 170
                 556679999999999987765511566677777**********9998776 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   0.00011     0.079       3      69 ..      11      90 ..       9     111 .. 0.73
   2 ?   -0.7   0.0       1.3   8.9e+02     144     165 ..     121     142 ..     117     154 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00011
                EEEEESTTCCHHHHHHHHHCT--SS-.EEEEESS-..SSCHCCCCCC.........HCCCT......EEEETTTTECCHCTT-H CS
        cobW  3 tvltGflGsGKTtLlnhllenraglk.lavivNef..gevsiDaell.........retgve.....ivelenGciCctlredl 69
                +++ G  G GKT+++n++++++ +++  a i  +f  +ev +D +++         +    e      v +  G  Cc l  d+
  EPX72417.1 11 VIILGESGVGKTSIMNQYVNKKFSKDyKATIGADFltKEVLVDDKVVtlqlwdtagQ----ErfqslGVAFYRGADCCVLVYDV 90
                689999*************66555441588999993345889999996666644432....24455588889999999876665 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 1.3
                 EEEEE-HHHHCHC..HHHHHHH CS
        cobW 144 llvlnKtDlldeeallekleer 165
                 +l+ nK+D+ +++++++k +++
  EPX72417.1 121 ILIGNKVDVEEKKRMVSKSKAQ 142
                 5788999999888777766654 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0     7e-05     0.049      33      63 ..       6      36 ..       2      72 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 7e-05
        TniB 33 krmpnlllvGdsnnGKtmivekFarlhppek 63
                k   +++++G+s +GKt+i++++ +++ +++
  EPX72417.1  6 KHLLKVIILGESGVGKTSIMNQYVNKKFSKD 36
                5556789***************998875443 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00063      0.44       1      28 [.      11      35 ..      11      60 .. 0.75
   2 ?    0.2   0.0       1.4   9.6e+02      52      92 ..      84     126 ..      75     141 .. 0.62

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00063
  RNA_helicase  1 iwlyGpsgeGKStlakeLakallkklkl 28
                  +++ G+sg+GK++++++    + kk+ +
    EPX72417.1 11 VIILGESGVGKTSIMNQ---YVNKKFSK 35
                  6799***********99...44444433 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 1.4
  RNA_helicase  52 vvvidDfgqvkdee.nps.dlaelirlvsstpyplnmasleek 92 
                   +v++ D++++k+ e  +s   ++li++  s+p + +   + +k
    EPX72417.1  84 CVLVYDVNNSKSFEtLDSwRDEFLIQASPSNPETFPFILIGNK 126
                   4567788888877777776666677777766665555544444 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   0.00015      0.11       1      57 [.      10      69 ..      10     100 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00015
                EEEEE--TTSSHHHHHHHHHHHH...GGGEE.E..EEEEEE-------EEEEEET.T--E CS
    NTPase_1  1 kvfiTGppGvGKtTlvkkvlellkssgvkvg.G..fyteevreggrrigFkivdlasgee 57
                kv+i G++GvGKt ++++ +++  s+++k + G  f+t+ev  +++ +  ++ d a +e+
  EPX72417.1 10 KVIILGESGVGKTSIMNQYVNKKFSKDYKATiGadFLTKEVLVDDKVVTLQLWDTAGQER 69
                68999*************999988998886434449999999999999988888844443 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00025      0.18       2      42 ..      11      52 ..      10      89 .. 0.79
   2 ?   -2.0   0.0       4.9   3.4e+03     113     127 ..     112     131 ..      90     140 .. 0.63

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00025
                EEEE--SSSSHHHHHHHGGGGB.S--EEEEE--TT--HHHHH CS
       AAA_5  2 vlLvGppGtgKselaerlaaal.nreveyvqltrdtteedlk 42
                v+++G++G+gK++++ ++      + +    + +++t+e l+
  EPX72417.1 11 VIILGESGVGKTSIMNQYVNKKfSKDYKATIGADFLTKEVLV 52
                89***********99887554437777777777777766665 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 4.9
                 ......-EEEEEESS--..-T CS
       AAA_5 113 r.....frviatanpld.rsl 127
                 +     f +i  +n++d   +
  EPX72417.1 112 PsnpetFPFILIGNKVDvE-E 131
                 0334457788888888843.3 PP

>> DAP3  Mitochondrial ribosomal death-associated protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   0.00022      0.15      19      50 ..       4      35 ..       1      37 [. 0.85

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00022
                SSS---EEEEE-SSSSSTTTTHHHHHHHGGGS CS
        DAP3 19 kkkkvkrlvltGekgsGKSvlLlqalayAlek 50
                +kk   ++++ Ge g+GK+  ++q +   ++k
  EPX72417.1  4 RKKHLLKVIILGESGVGKTSIMNQYVNKKFSK 35
                678899******************98766665 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   0.00022      0.15      23      46 ..       9      32 ..       2      48 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00022
                     S-EEEECSTTSSHHHHHHHHHHHS CS
  Sigma54_activat 23 lsvlitGesGtGKellaraiheas 46
                     l+v+i+GesG+GK+ + +++ +++
       EPX72417.1  9 LKVIILGESGVGKTSIMNQYVNKK 32
                     79************9988776654 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   0.00025      0.17      23      50 ..      11      38 ..       4      50 .. 0.87
   2 ?   -2.4   0.0       5.2   3.6e+03      75      93 ..     133     160 ..     117     178 .. 0.39

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00025
    ATPase_2 23 yfiYGpegsGKtaLlkeiienledkdky 50
                + i G  g+GKt+++++ ++++ +kd++
  EPX72417.1 11 VIILGESGVGKTSIMNQYVNKKFSKDYK 38
                5799*****************9887765 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 5.2
    ATPase_2  75 kkklekal.........giavpkaelee 93 
                 k+ ++k +          i+  +++++e
  EPX72417.1 133 KRMVSKSKaqaycqdrgEIPYFETSAKE 160
                 3333333311112221133333333322 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   0.00027      0.18      22      47 ..      10      33 ..       2      69 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00027
                EEEEEESTTSSHHHHHHHHCCSHCCC CS
      NB-ARC 22 vvalvGmgGvGKttlakqilnksdev 47
                 v + G  GvGKt +++q +nk  + 
  EPX72417.1 10 KVIILGESGVGKTSIMNQYVNK--KF 33
                58899*************9988..33 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.6   0.00048      0.33      13      30 ..      10      27 ..       6     186 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00048
                EEEEEESTTSSHHHHHHH CS
                xxxxxxxxxxxxxxxxxx RF
    ABC_tran 13 kvaivGenGaGKStLlkl 30
                kv i+Ge+G GK+++++ 
  EPX72417.1 10 KVIILGESGVGKTSIMNQ 27
                689***********9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       754  (0.0420548); expected 358.6 (0.02)
Passed bias filter:                      559  (0.0311785); expected 358.6 (0.02)
Passed Vit filter:                        84  (0.00468515); expected 17.9 (0.001)
Passed Fwd filter:                        26  (0.00145016); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              26  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.40
# Mc/sec: 1535.50
//
Query:       EPX72418.1  [L=341]
Description: membrane transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.1e-11   42.4  41.9      7e-05   23.0  17.7    3.1  3  EamA      EamA-like transporter family
    8.2e-06   25.3   7.3    8.2e-06   25.3   7.3    2.0  1  PUNUT     Purine nucleobase transmembrane transport
    4.1e-05   23.2  16.4    7.2e-05   22.4  16.4    1.3  1  SLC35F    Solute carrier family 35
  ------ inclusion threshold ------
       0.02   14.3  13.6      0.065   12.6  13.6    1.9  1  TPT       Triose-phosphate Transporter family


Domain annotation for each model (and alignments):
>> EamA  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   1.0     5e-05      0.22       2      59 ..      11      70 ..      10      79 .. 0.83
   2 !   19.4   8.2     2e-07   0.00092      62     136 ..     100     174 ..      90     175 .. 0.85
   3 !   23.0  17.7   1.6e-08     7e-05       2     136 ..     193     334 ..     192     335 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 5e-05
        EamA  2 lgillallaalfwaiyfvlskillrkv...spltltfvrfliagillliiallkegklakl 59
                 g++l+l ++++w ++ +++  ll++    +p+++t + +    + l++++l++++ l k 
  EPX72418.1 11 TGVILLLFVVFLWLVSSFFTNNLLNDPgffNPFFITYLNTGTFVFYLIPWYLFERKDL-KK 70
                699*****************999776444499999999999999999******99998.33 PP

  == domain 2  score: 19.4 bits;  conditional E-value: 2e-07
        EamA  62 kdwllllllgllgtvlafllffyalkktsasnaslitslePvftlilsvlllgekltlkqllgivlillGvllil 136
                 ++ ++l l  ++  ++a+++ + +l  t+++  ++i+s++  ftl l++++  ek+t+ +ll+++ ++ Gv+l++
  EPX72418.1 100 RQTASLSLGFCIIWFAANYFSNGSLAFTNVASFTIISSMSGFFTLGLGAIFNVEKFTFVKLLALLASVGGVILVV 174
                 55555533334566778899*****************************************************97 PP

  == domain 3  score: 23.0 bits;  conditional E-value: 1.6e-08
        EamA   2 lgillallaalfwaiyfvlskillrkvspltltf.......vrfliagillliiallkegklaklslkdwllllllgllgtvlafllffyalkktsasn 93 
                 lg  +allaa++++ y vl k  +++ + +++         + +++   +l++++ +  +k++ +s ++  ++lll +  t++  +l+++a+  ts+  
  EPX72418.1 193 LGNTFALLAAFLYGCYSVLVKFHVTEENYVSMRLffglvglFDIVLLWPFLILLHYYGVEKFQLPSTNSGNAVLLLNAGITFVSDYLWVIAMLMTSPLL 291
                 57889*****************998888774332123333344444455556666666666677777777777888888899999************** PP

        EamA  94 aslitslePvftlilsvlllgekltlkqllgivlillGvllil 136
                 ++l +sl+  ++l++ ++l g  l+++ +lg +l+++G ++++
  EPX72418.1 292 VTLGMSLSIPLALFFDIILKGHYLNFTLILGSFLVFAGFIVVN 334
                 ****************************************997 PP

>> PUNUT  Purine nucleobase transmembrane transport
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3   7.3   1.8e-09   8.2e-06      62     186 ..      90     215 ..      13     285 .. 0.85

  Alignments for each domain:
  == domain 1  score: 25.3 bits;  conditional E-value: 1.8e-09
       PUNUT  62 kettssslslkklvllyivlGllvavdnllyslgllylpvstfslilatqLaFtaifsalinkqkftrfiinsvvlltisaallalssssdkpaees.k 159
                 +  ++  ++ ++ ++l++  +++ ++ n+++   l+  +v  f++i++ + +Ft  + a++n  kft++ +++++  + +  l+++++s++ p++++  
  EPX72418.1  90 TYVRNRPMTVRQTASLSLGFCIIWFAANYFSNGSLAFTNVASFTIISSMSGFFTLGLGAIFNVEKFTFVKLLALLASVGGVILVVIQDSKQIPDGHNsP 188
                 334445556677888999999*****************************************************9777777778888888888876537 PP

       PUNUT 160 kkyvigfiltlaasllfaLlLslvell 186
                 ++ + g   +l a+ l++ +  lv++ 
  EPX72418.1 189 SQPALGNTFALLAAFLYGCYSVLVKFH 215
                 88999************9887777654 PP

>> SLC35F  Solute carrier family 35
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4  16.4   1.6e-08   7.2e-05      80     296 ..     110     332 ..      97     335 .. 0.85

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 1.6e-08
      SLC35F  80 alvdveanylvvkayqytsltsvqlldcfaipvvlvlswlflkvryrlvkiigvvvcilGvvllvvsdvlagrra.nsgsnpvlGdllvlaGatlyavs 177
                 +++   any+   +  +t++ s +++ +++    l l  +f   ++ +vk++++++ + Gv+l+v+ d      + ns s+p lG+++ l+ a ly+  
  EPX72418.1 110 CIIWFAANYFSNGSLAFTNVASFTIISSMSGFFTLGLGAIFNVEKFTFVKLLALLASVGGVILVVIQDSKQIPDGhNSPSQPALGNTFALLAAFLYGCY 208
                 5666789*************************************************************8765444489********************* PP

      SLC35F 178 nvleeylvkk...lslvellgllglfGaiisaiqlailerkelkaihWdae...iallfvgfalvlfllysllpilikktsatsvnlslltsdlyslli 270
                  vl  + v +   +s+  ++gl+glf  ++    l++l++  +++ +  +     a+l+++  ++ f+   l  i + +ts  +v+l++  s   +l+ 
  EPX72418.1 209 SVLVKFHVTEenyVSMRLFFGLVGLFDIVLLWPFLILLHYYGVEKFQLPSTnsgNAVLLLNAGIT-FVSDYLWVIAMLMTSPLLVTLGMSLSIPLALFF 306
                 ******998722255667899*****999999999999999999988754311133444444444.5555577788899**********999999**** PP

      SLC35F 271 glflfhykvswlyllafvviliGlil 296
                  + l ++ ++   +l  +++  G+i+
  EPX72418.1 307 DIILKGHYLNFTLILGSFLVFAGFIV 332
                 **999999999999999999999998 PP

>> TPT  Triose-phosphate Transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6  13.6   1.4e-05     0.065      56     286 ..      70     330 ..      13     336 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.4e-05
         TPT  56 k........................rpkisseflkailplalvktlghvlavvslskvaVSfthtvKasePiFtvilsrlllgeklsllvylsLlpivg 130
                 k                        rp    ++ +  l   ++ ++++ +++ sl+ ++V    ++ ++  +Ft  l +++  ek+++ ++l+Ll  vg
  EPX72418.1  70 KdltthasiyesldgnqnsrtyvrnRPMTVRQTASLSLGFCIIWFAANYFSNGSLAFTNVASFTIISSMSGFFTLGLGAIFNVEKFTFVKLLALLASVG 168
                 15555555555555555555555446666666777778899999***************976679********************************** PP

         TPT 131 GvalasvtEl..........sFnligfisAlisnltfslrnifsKkllkklkdldalnlfaiitilslllllPvallvegvlktpsllkstkvslkevl 219
                 Gv+l  +++           s   +g + Al++ +   + +++ K  ++++  ++   +f +++++ ++ll P+++l+  + +    l st   ++   
  EPX72418.1 169 GVILVVIQDSkqipdghnspSQPALGNTFALLAAFLYGCYSVLVKFHVTEENYVSMRLFFGLVGLFDIVLLWPFLILLHYYGVEKFQLPST---NSGNA 264
                 *****99876212222222233467778899999999999999999999943366666678999999999999999999844444444444...35556 PP

         TPT 220 lllllsgvlfhlynqvaymvLervspvthsvantvKrvvvIvlsvlvfknpvsllnaiGtavaivGv 286
                 +lll +g+ f +   +   ++ ++sp+  +++ ++   + + + +++ +  +++  ++G+ ++ +G 
  EPX72418.1 265 VLLLNAGITFVSDY-LWVIAMLMTSPLLVTLGMSLSIPLALFFDIILKGHYLNFTLILGSFLVFAGF 330
                 67778888775544.4444555678888888888887788888888888888888888888777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (341 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       664  (0.037035); expected 358.6 (0.02)
Passed bias filter:                      235  (0.0131073); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2432.66
//
Query:       EPX72419.1  [L=430]
Description: hypothetical protein SOCG_00182 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (430 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       538  (0.0300073); expected 358.6 (0.02)
Passed bias filter:                      276  (0.0153941); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 3301.52
//
Query:       EPX72420.1  [L=788]
Description: phosphoribosylamine-glycine ligase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.3e-81  272.2   0.0    7.4e-81  270.6   0.0    1.8  2  GARS_A       Phosphoribosylglycinamide synthetase, ATP-grasp 
      2e-36  125.5   0.0      4e-36  124.5   0.0    1.5  1  AIRS_C       AIR synthase related protein, C-terminal domain
    5.3e-31  107.3   0.0    4.3e-29  101.1   0.0    3.0  2  GARS_N       Phosphoribosylglycinamide synthetase, N domain
    5.1e-28   97.2   0.1    1.3e-27   95.8   0.1    1.8  1  GARS_C       Phosphoribosylglycinamide synthetase, C domain
    2.4e-15   56.9   0.3    9.3e-15   55.1   0.4    2.0  2  AIRS         AIR synthase related protein, N-terminal domain
     0.0002   20.9   0.0    0.00041   19.9   0.0    1.5  1  CPSase_L_D2  Carbamoyl-phosphate synthase L chain, ATP bindin
  ------ inclusion threshold ------
      0.014   15.0   0.1      0.032   13.8   0.0    1.6  2  RimK         RimK-like ATP-grasp domain
      0.025   14.1   0.0      0.045   13.3   0.0    1.4  1  ATP-grasp    ATP-grasp domain
       0.16   11.5   0.0       0.45   10.0   0.0    1.7  2  ATP-grasp_2  ATP-grasp domain


Domain annotation for each model (and alignments):
>> GARS_A  Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  270.6   0.0   3.7e-84   7.4e-81       1     194 []     109     301 ..     109     301 .. 1.00
   2 ?   -2.0   0.0       1.3   2.5e+03      49      73 ..     733     757 ..     716     762 .. 0.83

  Alignments for each domain:
  == domain 1  score: 270.6 bits;  conditional E-value: 3.7e-84
                 HBHHHHHHHHHHTT--B--EEEESSHHHHHHHHHHHSSSEEEEEESC-GGGT-EEEESSHHHHHHHHHHHCTS-TTCCCCSSEEEEE---SEEEEEEEE CS
      GARS_A   1 asKsfakdllkkagiptaeyeaftdpeeakeyieeatakalVvKadglaagKgvivakseeealkavkeilekkkfGeagekvviEelleGeEvsllal 99 
                 +sK fak+++++ +ipta y+ f++++ea ++++++++++ V+Kadgla+gKgvi++++++ea++a+++i+ ++ fG ag++vviEell GeE+s+l++
  EPX72420.1 109 GSKVFAKNFMHRNNIPTAVYRIFSNYDEAVQFVNTCSFDI-VIKADGLAGGKGVIIPQTKHEATTALRDIMLNEDFGAAGKTVVIEELLVGEELSILTF 206
                 69**************************************.********************************************************** PP

                 ECTTEEEE---BEEEEEEECCCEEEEECECEEEES-TTS-HHHHHHHHHHTHHHHHHHHHCTT---EEEEEEEEEEETTEEEEEEEESS--TTCH CS
      GARS_A 100 vdgktvkplplaqdhkrvlegDkgpnTGGmGayspapvvteellekikeeileptveglkkegipfkGvLyaglmlvedgpkvlefnvRfgDpet 194
                 +dg+t+++lp+aqdhkr+++gD gpnTGGmGay+pap++t +l+++i+++i++ptv+g++ eg+p +G+L++glm++++gp+vle+nvRfgDpet
  EPX72420.1 207 TDGYTCRSLPPAQDHKRAFDGDLGPNTGGMGAYAPAPIATSQLVNQIHSTIIQPTVDGMRIEGYPLVGILFTGLMITPQGPRVLEYNVRFGDPET 301
                 **********************************************************************************************8 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 1.3
                 GGGT-EEEESSHHHHHHHHHHHCTS CS
      GARS_A  49 aagKgvivakseeealkavkeilek 73 
                   g g++v+  +e a +a+++++++
  EPX72420.1 733 NMGIGMVVVVPSEHAEEAIQDLFNS 757
                 5678899999999999999999975 PP

>> AIRS_C  AIR synthase related protein, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.5   0.0     2e-39     4e-36       1     149 [.     608     771 ..     608     775 .. 0.94

  Alignments for each domain:
  == domain 1  score: 124.5 bits;  conditional E-value: 2e-39
                 STTEEEEEEETSSCTCCHHHHHHHCHHHCTSHTT.......TSEHHHHHHHHHHHHHHHHHHHH.HTTECEEEE--TTHHHHHHHHHHHTTTEEEEEEC CS
      AIRS_C   1 kpGdvliltgslGlggagtslkrkileeegldds.......avqlgdvlleptliyvkralaal.kglvkaahDvTgGGLlgalaemapasgvgaeidl 91 
                 + Gdvl++++s+G++++g+sl+r+i+e +gld++       +  lg  ll+pt+iyvk++l  + kglv++++++TgGGL++++++m+p+  ++a+id+
  EPX72420.1 608 RSGDVLLGLASDGVHSNGYSLVRRIVEVSGLDYNskcpwddSTSLGFSLLTPTRIYVKPLLQIIkKGLVNGMAHITGGGLVENVPRMLPKK-FKAVIDA 705
                 57**************************************5555**********************************************7.******* PP

                 G...THHHHHHHH.....HHHHHHHCSTTTEEEEEEEHGGH.HHHHHHHHHTTCCCEEEEEEEEESS CS
      AIRS_C  92 d...kvpifdele.....splemllsensGrllvavppeea.davlaileeeglpeaavIGevtake 149
                 +    +++f++l+       ++m++++n+G+++v+v+p e+ +++++ l   g+ ++++IG++ +  
  EPX72420.1 706 NtwkVPEVFKWLQrtgnvPISDMARTFNMGIGMVVVVPSEHaEEAIQDLFNSGE-TVYRIGTLADNT 771
                 ******************9***************999999989999999999*9.7*****998765 PP

>> GARS_N  Phosphoribosylglycinamide synthetase, N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.1   0.0   2.2e-32   4.3e-29       4      90 .]       7     108 ..       5     108 .. 0.96
   2 ?    2.3   0.0      0.14   2.9e+02      49      74 ..     733     758 ..     701     770 .. 0.76

  Alignments for each domain:
  == domain 1  score: 101.1 bits;  conditional E-value: 2.2e-32
                 EEEESSHHHHHHHHHHTTSTTESEEEEEE--CGG................TTHHHHHHHHHHCTESEEEE-SHHHHHTTHHHHHHHHHT-EEES--CCC CS
      GARS_N   4 LvvGsGGRehalawklaqspkvekvyvapgNagt................edlealvefakeekidlvvvGpeapLvaGvadaleeekgikvfGpskea 86 
                 L++G+GGRehalawkla+sp v+k+yvapg +gt                 d+e+lv+f  e+k++l+v+Gpe pLv+G++ +++++ gi++fGps  a
  EPX72420.1   7 LLIGNGGREHALAWKLARSPLVSKIYVAPGTGGTeskgpeckienvnigvCDFEKLVQFSLEKKVNLAVPGPELPLVQGIETHFRKA-GIPCFGPSLLA 104
                 89**************************************99999999998899******************************777.*********** PP

                 CHHH CS
      GARS_N  87 AqlE 90 
                 A++E
  EPX72420.1 105 ARME 108
                 ***9 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.14
                 HCTESEEEE-SHHHHHTTHHHHHHHH CS
      GARS_N  49 eekidlvvvGpeapLvaGvadaleee 74 
                 + +i +vvv p +   + ++d +++ 
  EPX72420.1 733 NMGIGMVVVVPSEHAEEAIQDLFNSG 758
                 46799******************654 PP

>> GARS_C  Phosphoribosylglycinamide synthetase, C domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.8   0.1   6.7e-31   1.3e-27       1      79 [.     336     424 ..     336     425 .. 0.96

  Alignments for each domain:
  == domain 1  score: 95.8 bits;  conditional E-value: 6.7e-31
                 EEEEEEEETTTTSS--ST-EEBS.....TTEEEEESSEE.....EEE-SSEEEEEEEEESSHHHHHHHHHHHHTTCB-TTEE--STTTH CS
      GARS_C   1 avgvvlaskGYPgsyekgkeitg.....egvkvfhagtk.....lvtsGGRvlavvavgetleeArakayeavkkikfeglfyRkDIGa 79 
                 +++vv++++GYPgsy+kg++it      e+v++fhagt+     +vt+GGRvlav a+get+e A + aye+vk+++ +++f+RkDI++
  EPX72420.1 336 SCAVVCVAGGYPGSYPKGDPITFsetsnENVHIFHAGTSlkngqIVTNGGRVLAVNATGETVESAVKLAYEGVKTVQYKDMFFRKDIAH 424
                 589******************77999*9999*******9888989*******************************************9 PP

>> AIRS  AIR synthase related protein, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0         9   1.8e+04      58      75 ..      82      99 ..      81     100 .. 0.88
   2 !   55.1   0.4   4.6e-18   9.3e-15       5      93 ..     491     594 ..     469     595 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 9
                HHHHHHHHHHHTT-EEEE CS
        AIRS 58 vvrglaeaaeelgvplvg 75
                +v+g++   +++g+p  g
  EPX72420.1 82 LVQGIETHFRKAGIPCFG 99
                5899**********9876 PP

  == domain 2  score: 55.1 bits;  conditional E-value: 4.6e-18
                 EEEEEEEEE.EECC....TCCCCHHHHHHHHHHHHHHTTTEEEEEEEEEEEEC.....HHHHHHHHHHHHHHHTT-EEEEEEEEEESS......EEEEE CS
        AIRS   5 vvvttdshnrpvlv....epvhfiGakavavnlsDlaamGArPlalllslalp.....wleevvrglaeaaeelgvplvgGdtsfsne......ptisv 88 
                 +v +td++++++l+    ++++++G  +va+n++Dl++ GA+Pl +l+++a +     +   +v+g+ ++++++g++lvgG+ts++++      +  + 
  EPX72420.1 491 LVSATDGVGSKLLIalhtNKHDTVGIDLVAMNVNDLVVQGAEPLIFLDYFATGkldlaISTSFVKGVVNGCKQAGCALVGGETSEMPGlyheghYDANG 589
                 57789999999999444444555**********************************9999***********************998877778888888 PP

                 EEEEE CS
        AIRS  89 tavGl 93 
                 t vG 
  EPX72420.1 590 TSVGA 594
                 88886 PP

>> CPSase_L_D2  Carbamoyl-phosphate synthase L chain, ATP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0     2e-07   0.00041       2      89 ..     111     196 ..     110     201 .. 0.84

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 2e-07
                  HHHHHHHHHHTT-BBSSEECSSBSSHHHHHHHHHHH-SSEEEEETTCCTTTTEEEESSHHHHHHHHHHHHHHHHHHHSTS-EEEEE-- CS
  CPSase_L_D2   2 kesakealkkinvpvvpssaapvetleealaiakeigyPviikaafglGGkGmrvarneeelaelvkkalaeakaafgnkqvlveksl 89 
                  k+ ak+ +++ n+p++   +   ++ +ea+++++++++ ++ika    GGkG  + +++ e + +++  + +     + k+v +e+ l
   EPX72420.1 111 KVFAKNFMHRNNIPTAVYRIF--SNYDEAVQFVNTCSFDIVIKADGLAGGKGVIIPQTKHEATTALRDIMLNEDFGAAGKTVVIEELL 196
                  567889999999999887777..************************************99999888877666544455677777766 PP

>> RimK  RimK-like ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   1.6e-05     0.032       6      97 ..     113     199 ..     108     203 .. 0.82
   2 ?   -3.9   0.0       4.4   8.7e+03     143     161 ..     510     528 ..     505     529 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1.6e-05
                 HHHHHHHHTT-----EEEESS-S-HHHHHHTT-.-SSEEEEE-TTTT--EEEEE-SHHHHHHHHHHGGG--EEEEE--SS-SEEEEEEEETT CS
        RimK   6 kslklLakakikvpntalardeedaekliekiklrfPvvvKsvegsqGikvvlakkeqklkqvlealkeailvqeyieeaenediRvlvvdd 97 
                  + + + +++i++ + ++  ++++a+++++    +f +v+K      G +v++ +++ ++      l+  +l  ++ +  +   i  l v++
  EPX72420.1 113 FAKNFMHRNNIPTAVYRIFSNYDEAVQFVNTC--SFDIVIKADGLAGGKGVIIPQTKHEATTA---LRDIMLNEDFGAAGKTVVIEELLVGE 199
                 5566788999*********************9..79******99999********99999876...77777777777666666666666555 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 4.4
                 T-SEEEEEEEEETTEEEEE CS
        RimK 143 elvvaGvDllrakrgllvl 161
                 + + +G+Dl+  + + lv+
  EPX72420.1 510 KHDTVGIDLVAMNVNDLVV 528
                 5678999999999888876 PP

>> ATP-grasp  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   2.3e-05     0.045       3      84 ..     120     207 ..     118     254 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 2.3e-05
                 TTT--B-EEEEECCHHHHHHHHHHH-SCEEEEESSS-CTTTTEEEECTCCGHHCHHHHC........GTTCEEEEE----SEEEEEEEEE CS
   ATP-grasp   3 klglpvprflaveskeeleeaaeelglpvvvKarrlgydGkGqsvvrseedleqaleal........keekvivEefvpfekElsvlvvr 84 
                 ++++p++ + + ++ +e+ +++++  + +v+K + +   GkG  + + ++++ +al+ +        ++++v++Ee      Els+l+  
  EPX72420.1 120 RNNIPTAVYRIFSNYDEAVQFVNTCSFDIVIK-ADGLAGGKGVIIPQTKHEATTALRDImlnedfgaAGKTVVIEELL-VGEELSILTFT 207
                 689*****************************.666678****************99988999999767777777765.57788888754 PP

>> ATP-grasp_2  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   0.00023      0.45       7     100 ..     114     200 ..     111     205 .. 0.76
   2 ?   -3.1   0.0       2.4   4.7e+03     123     165 ..     679     720 ..     672     734 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00023
                  HHHHHHCTT----SEEEESSHHHHHHHHHHHTSSSEEEEE--SSSTCCCTTCEEEESSHHHHHHHHHCC.TTSEEE-TTS-TT-EEE..--EEEEE- CS
  ATP-grasp_2   7 akeilakygvkvpegevaesaeeaeeaakklgekelvvKaQvlaGGRGKagGvklvkskeeakeaakel.lgkelvtkqtgkeGkkv..ekvlveea 100
                  ak+ +++++++++  ++ ++ +ea + ++  + +  v+Ka  laGG+    Gv + ++k+ea++a +++ l+++       ++Gk+v  e++lv e+
   EPX72420.1 114 AKNFMHRNNIPTAVYRIFSNYDEAVQFVNTCSFDI-VIKADGLAGGK----GVIIPQTKHEATTALRDImLNEDFG-----AAGKTVviEELLVGEE 200
                  8999************************9977665.*********98....5888888888888877651444443.....4444322266666665 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 2.4
                  EEESSTTS-HHHHHHH-GGGEEEEEEBTTTB--HHHHHHHHHH CS
  ATP-grasp_2 123 iaSseGGvdiEevaakkPekiikvaidpakglkeeqareiakk 165
                  +a  +GG  +E+v    P+k +k++id+++   +e  + + ++
   EPX72420.1 679 MAHITGGGLVENVPRMLPKK-FKAVIDANTWKVPEVFKWLQRT 720
                  66678999999999999988.5788998877777766666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (788 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       425  (0.0237046); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.64u 0.27s 00:00:00.91 Elapsed: 00:00:00.44
# Mc/sec: 5435.93
//
Query:       EPX72421.1  [L=336]
Description: homoserine kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.9e-11   41.7   0.0    1.8e-10   40.9   0.0    1.4  1  GHMP_kinases_N  GHMP kinases N terminal domain
     0.0071   16.7   0.0      0.016   15.5   0.0    1.7  1  GHMP_kinases_C  GHMP kinases C terminal


Domain annotation for each model (and alignments):
>> GHMP_kinases_N  GHMP kinases N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.9   0.0     2e-14   1.8e-10       1      66 []      85     146 ..      85     146 .. 0.83

  Alignments for each domain:
  == domain 1  score: 40.9 bits;  conditional E-value: 2e-14
                     EEEEEESSHTTSSSCHHHHHHHHHHHHHHHHTTEHHHHHHHHHHHH.HHHHHHHHHSHHHHHHHHSS CS
  GHMP_kinases_N   1 divikseiPvgaGLGSSAAlavalvaAllallglsleeaklaleae.rlaqggngsggDvaasvyGg 66 
                     +i++k+ iP+g+G+GSS+++a a+v+ +++l +l+l     +  +   ++   + ++++v as++Gg
      EPX72421.1  85 KIHVKNPIPLGRGMGSSGSAAIAGVMLANELAQLKL-----SKLQMmDYVLMIERHPDNVMASMMGG 146
                     69******************************9555.....433332444556679**********8 PP

>> GHMP_kinases_C  GHMP kinases C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   1.8e-06     0.016      25      79 ..     259     310 ..     230     316 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.8e-06
  GHMP_kinases_C  25 lkavvgilppeleelleal...selGalgaklsGaGgGptvfalfkdkdeaeqvaral 79 
                     +  ++  l p l ++l  +   s++G +g +lsGa  Gpt+  l++d+   e++a+++
      EPX72421.1 259 P--YRSQLIPGLQTILAQMtpeSQPGLCGICLSGA--GPTILSLATDHY--EEIAEKM 310
                     5..66666666666666664335788*********..********4444..4777777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (336 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       539  (0.030063); expected 358.6 (0.02)
Passed bias filter:                      506  (0.0282224); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2415.57
//
Query:       EPX72422.1  [L=99]
Description: guanyl-nucleotide exchange factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.7e-20   70.7   0.0      1e-19   70.4   0.0    1.1  1  Mss4      Mss4 protein


Domain annotation for each model (and alignments):
>> Mss4  Mss4 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.4   0.0   5.8e-24     1e-19       2      92 ..      13      97 ..      12      99 .] 0.86

  Alignments for each domain:
  == domain 1  score: 70.4 bits;  conditional E-value: 5.8e-24
        Mss4  2 svvlkaneakivekeeelpllekksekeeqkeselleefllvedvfdFdnvgvskevess.kyLiCAdCekGPiGiidlsekksfylalerv 92
                svv++++++ +vek++ +++l        +k   + e++++++d+f+Fdn++vsk ++s+ k+L+C++CekGP+G++d + k+  yl+l+++
  EPX72422.1 13 SVVFSNERPAVVEKPTLRSILGAA-----EKGPSESERYYSLKDPFAFDNISVSKPLASNiKLLACGECEKGPLGYFDPEGKE--YLLLSSL 97
                99************9988888876.....222224579******************99877*****************99999..8888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       418  (0.0233142); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.32s 00:00:00.88 Elapsed: 00:00:00.58
# Mc/sec: 517.63
//
Query:       EPX72423.1  [L=670]
Description: fork head transcription factor Sep1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-35  119.8   0.1    8.3e-35  118.9   0.1    1.5  1  Forkhead  Forkhead domain
  ------ inclusion threshold ------
      0.066   12.6   0.3       0.53    9.6   0.1    2.0  2  Sec15     Exocyst complex subunit Sec15-like


Domain annotation for each model (and alignments):
>> Forkhead  Forkhead domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.9   0.1   9.2e-39   8.3e-35       2      87 .]     144     229 ..     143     229 .. 0.96

  Alignments for each domain:
  == domain 1  score: 118.9 bits;  conditional E-value: 9.2e-39
                 -----HHHHHHHHHHT-TTT-B-HHHHHHHHHCC-HHHHCC.-CCHHHHHHHHHHHHC--EEETT.-T.TSS--EEE--TTHHHHHH CS
    Forkhead   2 kPpysYaaLIaqAiksspekkltLseIyefieenfpyyrtaakkgWqnSirhnLslnkcFekvpreee.egkgslwtidpeseekfe 87 
                 kPpysYa LI + i+ spek+ltLs Iy++i+ +f++y+++ ++gWqnS+rhnLslnk+F+kv+r+++ +gkg++w+i+p +e++f+
  EPX72423.1 144 KPPYSYAMLIGMSILCSPEKRLTLSAIYDWISGTFSFYSKS-SNGWQNSVRHNLSLNKAFMKVERSKNlPGKGHFWAIRPGYEDQFQ 229
                 9**************************************95.9**********************88878*************9985 PP

>> Sec15  Exocyst complex subunit Sec15-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.1   5.9e-05      0.53      30      72 ..      40      82 ..      23      83 .. 0.91
   2 ?    0.6   0.0     0.034     3e+02     222     244 ..     508     530 ..     488     563 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 5.9e-05
                ------SSHHHHHHHHHHHHHHHT---SSS-STTTTTHHHHHH CS
       Sec15 30 PFSqlyplcCidirkfieklykFledlyqhereiddilrksld 72
                P+S+ yp+++ +  +   ++y+++  ly + +e +++l+ sl 
  EPX72423.1 40 PYSRPYPDVYSQTSNSTFNTYNYSTALYASGKENQNMLNASLP 82
                9*************************************99985 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.034
                 HHHHHHHHTTS---S--SSSHHH CS
       Sec15 222 iaeslldlllseevkrineeave 244
                   +++l++l  +++k++n+ av+
  EPX72423.1 508 HRNRILQMLATPDAKQFNNIAVS 530
                 5689*****************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (670 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       462  (0.0257683); expected 358.6 (0.02)
Passed bias filter:                      292  (0.0162865); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.76u 0.34s 00:00:01.10 Elapsed: 00:00:00.56
# Mc/sec: 3592.00
//
Query:       EPX72424.1  [L=1685]
Description: DNA-directed RNA polymerase I complex large subunit Nuc1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.5e-98  329.5   0.1      3e-98  328.5   0.1    1.5  1  RNA_pol_Rpb1_5  RNA polymerase Rpb1, domain 5
      2e-67  226.6   0.2    5.5e-67  225.1   0.2    1.9  1  RNA_pol_Rpb1_2  RNA polymerase Rpb1, domain 2
    6.9e-37  126.8   0.0    1.7e-36  125.5   0.0    1.8  1  RNA_pol_Rpb1_3  RNA polymerase Rpb1, domain 3
    1.5e-30  106.7   0.8    2.2e-29  102.8   0.4    3.1  2  RNA_pol_Rpb1_1  RNA polymerase Rpb1, domain 1
    7.4e-23   80.6   0.5    3.4e-22   78.4   0.0    2.4  2  RNA_pol_Rpb1_4  RNA polymerase Rpb1, domain 4


Domain annotation for each model (and alignments):
>> RNA_pol_Rpb1_5  RNA polymerase Rpb1, domain 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  328.5   0.1  8.5e-102     3e-98       1     265 [.    1002    1628 ..    1002    1630 .. 0.98

  Alignments for each domain:
  == domain 1  score: 328.5 bits;  conditional E-value: 8.5e-102
                      B--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEETTSEEEETTS-EEESSGGGTS........................... CS
                      xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........................... RF
  RNA_pol_Rpb1_5    1 GLkvkefffhtmggReGLiDtAvkTaesGYlqRrlvkaledvvvkyddtvrnsggeivqflygedg........................... 66  
                      G+ ++e+ffh+m+gReGLiDtAvkT++sGYlqR+l+k+le++ v+yd+tvr+++g++vqf yged+                           
      EPX72424.1 1002 GIAPQEYFFHCMAGREGLIDTAVKTSRSGYLQRCLMKHLEGLNVEYDHTVRDADGSVVQFFYGEDSldvtkqkhltqfefsarnyksliqkyk 1094
                      99******************************************************************************************* PP

                      ............................................................................................B CS
                      ............................................................................................x RF
  RNA_pol_Rpb1_5   67 ............................................................................................l 67  
                                                                                                                  l
      EPX72424.1 1095 vksvlsavdsekassyakkalkkphkydpvldkyppsrylgsvsekfqravddytqknpdkliagkkeskqdesllneakfkalmqlryqqsL 1187
                      ********************************************************************************************* PP

                      --TT-BHHHHHHHHHHHHHHCCCSSTTSSTCSSTSSSSSSHHHHHHHHTT.-SS-SS-EEEEEB-SSSSSCHHHCHHHHHHHSE......... CS
                      xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......... RF
  RNA_pol_Rpb1_5   68 vepGeavGiiaaQSiGePgTQltlnTFHfaGvasknvtlGvprlkeilnv.skniksksltvllvdeeakelekakkvkkaiek......... 150 
                      v+pGe vG++a+QSiGeP+TQ+tlnTFHfaG+++knvtlG+prl+ei+++ s+ni+++++t++l+d++++e++   +++k+++k         
      EPX72424.1 1188 VDPGEGVGVLASQSIGEPSTQMTLNTFHFAGFGAKNVTLGIPRLREIIMTaSANIQTPQMTLRLNDNVSEERSA--AFCKEVNKlvlselvkq 1278
                      ***********************************************9999*****************666555..888888888999***** PP

                      ............................................................................................. CS
                      ............................................................................................. RF
  RNA_pol_Rpb1_5  151 ............................................................................................. 150 
                                                                                                                   
      EPX72424.1 1279 vrvverisgqgsdeqsksyaihldlyprkeyeeeygaqqeeiertvsstflrvlnrnikgylsktrqrksagdesspevgealrplediadap 1371
                      ********************************************************************************************* PP

                      ............................................................................................. CS
                      ............................................................................................. RF
  RNA_pol_Rpb1_5  151 ............................................................................................. 150 
                                                                                                                   
      EPX72424.1 1372 vegaaqeslededndatnekmaarskqhasyegpdegdrdalrdfkksqkeeeemdeddgfksdesvtdykerkqaeklkassinekrafnlq 1464
                      ********************************************************************************************* PP

                      ...................................................CBTTEEEEEEEEEEEEEEETEEEEEEECS--HHHHTTSTTTB CS
                      ...................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  RNA_pol_Rpb1_5  151 ...................................................gikkikrilvkeaekgkeeekelvletegvnlsevlkveevv 192 
                                                                         +i++i+r++ k  ++ + +    ++ tegvnl+++++  + +
      EPX72424.1 1465 taqtvlpncknvdfdyqngewatvelvfpintekllmvslveaacaqtvvhEISGITRCFPKPPDSAMDT--VPKVITEGVNLKAMWEFYNEI 1555
                      **************************************************************99955544..34789**************** PP

                      ETTTEEESSHHHHHHHHCHHHHHHHHHHHHHHHHHHTTS---HHHHHHHHHHHTTTSS---SSTTCHCCSSSH CS
                      xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  RNA_pol_Rpb1_5  193 dageilsndiaeileilgieaarkallkeiqevykvqgvsvndrHlelivdqmtkkgeivavnrsGinkaels 265 
                      ++++i +ndia+il+i+g+eaar+a+++e++ v+ v+g+ v+ rHl+li+d+mt++g ++a+nr+Gi+ ++++
      EPX72424.1 1556 SMNDISTNDIAAILRIYGVEAARNAIVNEVSAVFGVYGIGVDSRHLSLIADYMTFEGGYKAFNRMGIEYNTSP 1628
                      ********************************************************************99876 PP

>> RNA_pol_Rpb1_2  RNA polymerase Rpb1, domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  225.1   0.2   1.5e-70   5.5e-67       1     165 [.     481     668 ..     481     669 .. 0.95

  Alignments for each domain:
  == domain 1  score: 225.1 bits;  conditional E-value: 1.5e-70
                     SEEESSEEEEEEEEESSS-TTEEEEEHHHHTTSEEEEE-STTTHHHHHHHHHHTTTSSSSEEEEESTTSSEEETTTT-SCHHCCTTTTS...... CS
  RNA_pol_Rpb1_2   1 GkrvdysaRsvispdpnlkldevgvPisvakkltvpeivtelnikklrklvengpevyPgasyvkredgsekklkakkrklakelekgd...... 89 
                     Gkrv+y+aRsvispdpn++++e+gvP ++a+klt+pe+vt +n++++r++v ngp+++Pga+++++edg+  +l   +++++++l+ +       
      EPX72424.1 481 GKRVNYAARSVISPDPNIETNEIGVPPVFATKLTYPEPVTLYNFNEMRNAVVNGPHKWPGATHIQNEDGTLVSLMPLTTEQRTALANQLltpqsn 575
                     9***********************************************************************9988877766666666666779* PP

                     ................EEEEE--TTSEEEEE-SSTTSGGGEEEEEEEEESS.SSEEEEGGGHCCCT--SSS-EEEEE--SSHHHHHHHHHCSB CS
  RNA_pol_Rpb1_2  90 ................iverhvkdgdvvllNRqPsLhklsimahrvkvlek.ktlrlnlsvttayNaDFDGDemnlhlpqseearaEaeelll 165
                                     +v+rhv++gd+++lNRqP+Lhk s+mah+++vl++ kt+r++++++++yNaDFDGDemn+h+pqs +araEa+ +++
      EPX72424.1 576 lisspysysrlvntnkKVYRHVRNGDMLILNRQPTLHKPSMMAHKARVLPGeKTIRMHYANCNSYNADFDGDEMNMHFPQSANARAEAQFIAN 668
                     **************************************************99************************************98876 PP

>> RNA_pol_Rpb1_3  RNA polymerase Rpb1, domain 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.5   0.0   4.8e-40   1.7e-36       1     157 []     672     848 ..     672     848 .. 0.91

  Alignments for each domain:
  == domain 1  score: 125.5 bits;  conditional E-value: 4.8e-40
                     CSEETTTTEESSS--THHHHHHHHHSSTTEEEEHHHHHHHHHHSSSCCS.....SSSSSSSSBESSSEBEEHHHHHHCCCHC.......CCCEEE CS
  RNA_pol_Rpb1_3   1 nilspqsgkPvigivQDsllGvyllTkedvfidreeaqqllykgvgsds.....ktvtlrpailkpkelwtgkqtfsrilpn.......einyer 83 
                     ++l p sg P+ g++QD+++  ++lT +d+f++r+e+qqlly+  ++d+     +++t++pa+l pk  wtgkq++s il n        +n+++
      EPX72424.1 672 QYLVPTSGDPLRGLIQDHVVMGVWLTCKDTFYTRDEYQQLLYQALKPDEtglfgRIKTVPPAVLSPKIYWTGKQVISTILLNlkpsdrpGLNLRG 766
                     6899******************************************99667777889************************99999999666666 PP

                     E.SSSS..........STSEEECSSEEEES--SHHHHSSSSTTSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCEB-TGGGG CS
  RNA_pol_Rpb1_3  84 k.neek..........dgkvlikngelikGvidkkvvgkksqgslihvlakeygiketvrfldslqrlgfkyllqsgftigigDt 157
                     k +             +g+vl+++gel++Gv+dk+ +g +s  +++h +++ yg + + r+l+ l+rl+++y++++gft+ ++D+
      EPX72424.1 767 KaK--VagkywspnseEGTVLFEDGELLCGVLDKSSFG-ASSFGIVHSVHELYGADIAGRLLSVLSRLFTAYAQMRGFTCRMDDL 848
                     541..134566677779*********************.999******************************************5 PP

>> RNA_pol_Rpb1_1  RNA polymerase Rpb1, domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.8   0.4   6.2e-33   2.2e-29       2     310 ..       9     477 ..       8     479 .. 0.76
   2 ?   -1.5   0.0      0.35   1.3e+03     178     207 ..     589     618 ..     562     627 .. 0.83

  Alignments for each domain:
  == domain 1  score: 102.8 bits;  conditional E-value: 6.2e-33
                     E---EEEEEE--HHHHHHH-SBB--STTSTCSTSSSSBBSSSSSSSSS-SSSSSTSTTTSSTTTT-----EEEEEECEEE-HHHHHHHHHHCTTC CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  RNA_pol_Rpb1_1   2 kkikeiqfgiaspeeirkwSvvevtkaetieekslkPeegGllDerlgtidkdleCetCgkkkkeCeghfGhieLakPvfhigffklilkilecv 96 
                     +++k+++fgi + e+i k+Sv ++ ++ ++++  + P +gGl D  lg   k+  C+tC+ ++ +C+ghfGhi L +P +h  ff+ ++++l+++
      EPX72424.1   9 SEVKNVTFGIYDVEQIEKISVKQIINPVLFDNL-NHPTSGGLYDLALGPYLKNSLCATCHLDERYCPGHFGHIVLPTPAYHPLFFSQMYNLLRST 102
                     589****************************99.5************************************************************ PP

                     ETTTTEBSS-TT..................SH....HHHHHHCSSSCC............................................... CS
                     xxxxxxxxxxxx..................xxxxxxxxxxxxxxxxxx............................................... RF
  RNA_pol_Rpb1_1  97 ckecskllldee..................kkkllsklkkrekleelk............................................... 126
                     c +c++  l++                   +                +                                               
      EPX72424.1 103 CLYCHHFKLSKVkvhlygcklklldngllnE------S---------Qlvenvslteaaitkpksasgteggsdsedsglgnddiakdastlmrl 182
                     ***********97777777776664444432......2.........122222333355666678999999999999999999999999999999 PP

                     ...............................CCHHHHHHHHCCS-BE-SSSSB-EEE...................................... CS
                     ...............................xxxxxxxxxxxxxxxxxxxxxxxxxx...................................... RF
  RNA_pol_Rpb1_1 127 ...............................krlkaieelckkinlcekCgavqpkl...................................... 152
                                                    k ++   +   + ++c++C+  +p++                                      
      EPX72424.1 183 rdeyvnraiaeakgnvhvdshtttillherkKVVRSFYRDITSRKQCDNCQSFSPNFrkegfakifelplsgknlqymeqtgkirsdvlrdtskk 277
                     99999999999999999999999999994444444444444555556666666677677777788888888888888777777777777777777 PP

                     ........................EEETTEEEEEESSSSTSCEEEE-HHHHHHHHHCSTHHHHHHTTSBTTTB-.....GGGCCECCEEE--GGG CS
                     ........................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxx RF
  RNA_pol_Rpb1_1 153 ........................eeegeklkaalkkskeeekeklsaekvkkllkriededvevlgfkssgsr.....PewliltvlPVpPpei 218
                                             ee+ + +k++ k s  +  + +++++v++ l+r+  ++ +vl    s++r      + + l+++ VpP + 
      EPX72424.1 278 dtedegyegesdsnddegegidlmEEDANPMKKKSKVSAAHGAKYMTSTEVRNHLRRLFGKESSVLTRLYSHKRgsaatADMFFLQNIAVPPTRF 372
                     777777777777777777777776666666777777777688899999**********888877776555444412221456789********** PP

                     S-BEESSSSSEEBECCCCHHHHHHHHHHHHHHHHHS.SSSSTCHHHHH.....H...H.......HHHHHHHCC-TTSSSSSEEBSTTSSS--TH CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxx.....x...x.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  RNA_pol_Rpb1_1 219 RPsvqldggrrsedDlteklrdiikrNnrLkkaeee.gapeliieeek.....e...l.......LQehvatlfdneisglkpatqkskrplksl 297
                     RP+ +++  +  e+  +e+l++i++   ++    ++ ++p+++ ++e      +   l       LQ  v++l+d++ +     + +s     ++
      EPX72424.1 373 RPASKMGD-EVHENIQNELLTKILQSSIQIAALSKDtNVPKSAEDKEAyergsRafeLligafvqLQHDVNSLIDSNRNP--SQMGQSRMVPPGI 464
                     *****999.7778888999999999999988765431445443332211111111221223333389********99854..335555556689* PP

                     HHHHTSSSSCCCC CS
                     xxxxxxxxxxxxx RF
  RNA_pol_Rpb1_1 298 sqrLkGKeGrfRg 310
                     +q L  KeG fR+
      EPX72424.1 465 KQILEKKEGLFRK 477
                     ************7 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.35
                     HHHHHHHCSTHHHHHHTTSBTTTB-GGGCC CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  RNA_pol_Rpb1_1 178 kvkkllkriededvevlgfkssgsrPewli 207
                     + kk+++++++ d+ +l+ ++   +P+ + 
      EPX72424.1 589 TNKKVYRHVRNGDMLILNRQPTLHKPSMMA 618
                     457899999999999999999999998774 PP

>> RNA_pol_Rpb1_4  RNA polymerase Rpb1, domain 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.4   0.0   9.5e-26   3.4e-22      18     108 .]     905     995 ..     886     995 .. 0.79
   2 ?   -3.0   0.1       1.9   6.7e+03       6      36 ..    1316    1346 ..    1310    1354 .. 0.73

  Alignments for each domain:
  == domain 1  score: 78.4 bits;  conditional E-value: 9.5e-26
                     HHHHHHHHHHHHHHHHHHHHHHHHHHCSTT.......TSHHHHHHHCTSSS-HHHHHHHHTB-EEEEBTTBSS--SSTSCSSTTSSSSESSTTTS CS
  RNA_pol_Rpb1_4  18 leelfeakinkilnkardkagkiaskslaa.......sNsiliMvksGaKGsiinisqiagclGqqnvegkripkgfsgrtlphfkkidespesr 105
                     l+++ + k+n +        +++++k++++       +N+++ M+ sGaKGs++n+sqi+++lGqq++eg+r+p ++sg++lp+f ++++s+++ 
      EPX72424.1 905 LDATVKGKMNGLT-------SSVINKCIPDglltkfpQNHMQAMTVSGAKGSNVNVSQISCLLGQQELEGRRVPVMVSGKSLPSFLPYETSAKAG 992
                     3444444444444.......444555555335556889********************************************************* PP

                     SEE CS
  RNA_pol_Rpb1_4 106 GFv 108
                     GF+
      EPX72424.1 993 GFI 995
                     **8 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.9
                      THTCCHHHTTHCHHHHHHHHHHHHHHHHHHH CS
  RNA_pol_Rpb1_4    6 rygkledlpgksleelfeakinkilnkardk 36  
                      +++++e++ + +  ++++ +i+ +l+k r++
      EPX72424.1 1316 QQEEIERTVSSTFLRVLNRNIKGYLSKTRQR 1346
                      4467888888888888889999999987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1685 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1014  (0.0565564); expected 358.6 (0.02)
Passed bias filter:                      592  (0.0330191); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.16u 0.28s 00:00:01.44 Elapsed: 00:00:00.52
# Mc/sec: 9739.95
//
Query:       EPX72425.1  [L=767]
Description: cytoskeletal protein Syp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.5e-22   78.5   0.2    1.4e-21   77.1   0.0    1.7  2  muHD           Muniscin C-terminal mu homology domain
    3.9e-09   36.7   2.0    3.9e-09   36.7   2.0    3.2  4  FCH            Fes/CIP4, and EFC/F-BAR homology domain
     0.0037   17.3   0.6     0.0083   16.2   0.6    1.6  1  HEPN_Cthe2314  Cthe_2314-like HEPN


Domain annotation for each model (and alignments):
>> muHD  Muniscin C-terminal mu homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1      0.37   2.2e+03      56     100 ..      57      97 ..      28     110 .. 0.49
   2 !   77.1   0.0   2.4e-25   1.4e-21       2     239 ..     506     737 ..     505     757 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.37
                 GEEEEEE-TTTE..EEEETTEEEE-TTTTBT-E.EEEEEEEEES. CS
        muHD  56 klekvapNpafvteekqkdgeykinlsalarktktvalkYqvhad 100
                 +l k+a N + +++   ++  +    ++l+++t ++  kY+ +++
  EPX72425.1  57 NLHKLAMNMQNINS---QSMSFHDAWKQLEAET-LETAKYRNQMT 97 
                 34444444444421...1122222333333333.33355544443 PP

  == domain 2  score: 77.1 bits;  conditional E-value: 2.4e-25
                 EEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEE--SSS-----SEEEEEEETGGGEEEEEE-TTTE..EEEETTEEEE-TTTTBT-E.EEEEEEEEES. CS
        muHD   2 gLnasiiEtvnAwFkdgevtkskvvGelaLaynaspaasltlpdkltvrlenfeklekvapNpafvteekqkdgeykinlsalarktktvalkYqvhad 100
                 gL a+iiEt +   +d+ + + +  G++ L y a   +    ++ + vrl +   l  + +  ++  + +++ + +++++s+l+++    alkY ++ d
  EPX72425.1 506 GLSAAIIETFSGELTDAGLLRPSCSGTVYLKYAAIVGQL---SKVVGVRLASSFPLA-IKLQDEYSVHPSSSYDCFQVSTSKLETPN--PALKYDLQLD 598
                 9*********************************99998...69*******999996.55555665579999999********9999..9********* PP

                 .....---SEEEEEEEEE-SSEEEEEEEEEE-TT.TT--E.EEEEEEEEEEEB-SS.-EEEEEESSS--B-SSS-EEEEE-SSEEEETT---EEEEEEE CS
        muHD 101 pskasascPlilkpvWkleehqasviltyslnps.laiasavtLenlvlvvnldgs.ratsvqskPqatfskeksrvtWklpeleltsdsdegkllarf 197
                 + + +   Pl++++ Wk ee+  s+i +++ n + + i +++ ++ lv++v l ++  ++++qs P++ fs+++s++   ++++++ s +   k+larf
  EPX72425.1 599 SVNGARCIPLTVAQKWKHEETASSMIAFVKPNLAwKDIGNTLFIKKLVMSVYLGENiIVKGCQSSPAGEFSRKTSKLKLSFSDITVPSSG--FKVLARF 695
                 **99*****************************99999999************99989****************************9999..7****** PP

                 EESS---.-SS-EEEEEEE---S-SS----EEEEEESSS-T.. CS
        muHD 198 steesae.kpgkVevkFeveegatlsrlgislleqkkeedPfa 239
                  ++ sa  ++  V ++F+v+++++ s+l ++lle+ + e P +
  EPX72425.1 696 DVSPSAAvRKPVVGLQFTVNHKSNNSGL-VTLLERPELESPSS 737
                 ******9899999*******88886665.44444577777765 PP

>> FCH  Fes/CIP4, and EFC/F-BAR homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.7   2.0   6.5e-13   3.9e-09       7      76 ..      28      94 ..      22      95 .. 0.86
   2 ?   -3.5   0.0       2.2   1.3e+04      37      44 ..     141     148 ..     125     161 .. 0.64
   3 ?   -0.8   0.3      0.31   1.9e+03      29      37 ..     320     328 ..     283     391 .. 0.67
   4 ?   -3.4   0.0       2.1   1.2e+04      52      64 ..     564     580 ..     543     585 .. 0.68

  Alignments for each domain:
  == domain 1  score: 36.7 bits;  conditional E-value: 6.5e-13
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT----TT-.....HHHHHHHHHHHHHHHHHHHHHH CS
         FCH  7 krleqgialledlqeflkeRaeiEkeYakkLqkLakkylkrrkkkseestlvtawtvlleeteklaqshl 76
                +rleq    ++ l  +++eRaeiEk+Y+++L+kLa ++++     s++ ++++aw++l  et ++a+ + 
  EPX72425.1 28 QRLEQVRSDNDVLGYWIRERAEIEKQYSANLHKLAMNMQNIN---SQSMSFHDAWKQLEAETLETAKYRN 94
                6677777777888889************************54...4678******************997 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 2.2
                 HHHHCT-- CS
         FCH  37 LqkLakky 44 
                 L+kL+k  
  EPX72425.1 141 LKKLSKVS 148
                 44444433 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 0.31
                 HHHHHHHHH CS
         FCH  29 iEkeYakkL 37 
                  E+ Ya + 
  EPX72425.1 320 SEQSYASSI 328
                 345555554 PP

  == domain 4  score: -3.4 bits;  conditional E-value: 2.1
                 .......HHHHHHHHHH CS
         FCH  52 s....eestlvtawtvl 64 
                 +    ++s+++++++v 
  EPX72425.1 564 DeysvHPSSSYDCFQVS 580
                 24555889999999875 PP

>> HEPN_Cthe2314  Cthe_2314-like HEPN
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.6   1.4e-06    0.0083      62     154 ..      38     136 ..      30     151 .. 0.62

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.4e-06
  HEPN_Cthe2314  62 DklgqllNelydlgikekkisyftvlkklkkkkpelakkLkeikes..esfkelrkeRNketHrqinseliqddllqshqg.....gg...kvele 147
                    D+lg ++ e  +++ k+ + +  ++  ++++ ++  +  + + +++   ++ e  k+RN++tH+ ++s++    ll+  ++     +     ++l 
     EPX72425.1  38 DVLGYWIRERAEIE-KQYSANLHKLAMNMQNINS-QSMSFHDAWKQleAETLETAKYRNQMTHQ-MSSQI-YKPLLEYYTSspqtaSArklAERLT 129
                    89999999999999.6665777777777777752.23334444444667888899*********.88866.3333333333222431133335555 PP

  HEPN_Cthe2314 148 nvdrsie 154
                    n+ ++i 
     EPX72425.1 130 NIANEIS 136
                    5555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (767 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1082  (0.0603492); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.29s 00:00:00.94 Elapsed: 00:00:00.46
# Mc/sec: 5061.04
//
Query:       EPX72426.1  [L=302]
Description: translation initiation factor eIF3f [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-23   83.1   0.0    2.3e-23   82.4   0.0    1.3  1  JAB         JAB1/Mov34/MPN/PAD-1 ubiquitin protease
      2e-17   63.6   0.0    3.6e-17   62.8   0.0    1.5  1  MitMem_reg  Maintenance of mitochondrial structure and functi
     0.0047   17.0   0.0      0.013   15.5   0.0    1.7  2  UPF0172     Uncharacterised protein family (UPF0172)


Domain annotation for each model (and alignments):
>> JAB  JAB1/Mov34/MPN/PAD-1 ubiquitin protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.4   0.0   3.9e-27   2.3e-23       5     112 ..      22     123 ..      18     128 .. 0.92

  Alignments for each domain:
  == domain 1  score: 82.4 bits;  conditional E-value: 3.9e-27
                 EEEEEHHHHHHHHHHHHHHHHHTS--EEEEEEEESSSE.EEEEEEEEEESEEEESSECEEEEEHHHHHHHHHHHHHHHCTTSEEEEEEEESSSS-SS-- CS
         JAB   5 avhleslvllkildhalrtekeeeevmGlliGelnddt.tveitnvfalpfeetekdvdavsldqeylekksellkklrgrervvGWYhshpditvwls 102
                 +v +++ vl++ildh +r+++++++v+G+l+G  ++d   +e+ ++fa+p++e++++   v++++ey++++++l+ k ++re vvGWY + +d+    +
  EPX72426.1  22 HVVIDPSVLFSILDHSTRRSENNQRVIGTLLGIRSEDGrEIEVKSCFAVPHNESSEQ---VEVEMEYHRTMYHLHLKANPREVVVGWYATSSDL----D 113
                 89******************************99999889*****************...889999999*************************....6 PP

                 HHHHHHHHHH CS
         JAB 103 evdvrtqaly 112
                 + +  +q+ly
  EPX72426.1 114 AFSALIQNLY 123
                 6666666666 PP

>> MitMem_reg  Maintenance of mitochondrial structure and function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.8   0.0   6.1e-21   3.6e-17       1     109 [.     187     296 ..     185     299 .. 0.91

  Alignments for each domain:
  == domain 1  score: 62.8 bits;  conditional E-value: 6.1e-21
  MitMem_reg   1 Eaeeigvehllkpsiqdas..stlstglnrqyyslkilqerldlikdYlkkveegelpvnheilrnlqkllnllPhleteelekefnvetnDvllvvyL 97 
                 Ea + g+  ++ p+    s    l t+l++   s   + +++++++dY+++v++g  p+n +++r+l  +l+l+P +e +e+ek f+++++Dvl+vvyL
  EPX72426.1 187 EAIRSGLKAIAAPKND-PSriAGLFTDLQQLKRSTLEVLSMIERVSDYVQNVIDGSSPANVAVGRYLVRCLSLVPSIEGQEFEKIFSSHLQDVLVVVYL 284
                 4555688888877764.445889**************************************************************************** PP

  MitMem_reg  98 asltrsilalne 109
                 a+ +r+++++++
  EPX72426.1 285 ANTLRTQIDIAS 296
                 *******99876 PP

>> UPF0172  Uncharacterised protein family (UPF0172)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   2.2e-06     0.013       5      87 ..      26     113 ..      22     121 .. 0.77
   2 ?   -2.0   0.0      0.51     3e+03      73     103 ..     203     235 ..     191     249 .. 0.69

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 2.2e-06
     UPF0172   5 ssqAYvKlllHaaKyp..tqaVnGvLlgkkssskskvevtDavPLfH..ssltlspmlevAlaqvesyakek.glvivGyYqanerls 87 
                 +++  + +l H+ + +   q+V G Llg +s+++ ++ev+ +  + H  ss ++   +e   ++ + ++k++   v+vG+Y  ++ l+
  EPX72426.1  26 DPSVLFSILDHSTRRSenNQRVIGTLLGIRSEDGREIEVKSCFAVPHneSSEQVEVEMEYHRTMYHLHLKANpREVVVGWYATSSDLD 113
                 555666777788877522579*********************99999556666777777777777777777658899****9998876 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.51
     UPF0172  73 glvivGyYqanerlsdtelss..laekiadkia 103
                   +i+G++   ++l+ ++l+   + e++ d ++
  EPX72426.1 203 PSRIAGLFTDLQQLKRSTLEVlsMIERVSDYVQ 235
                 567888888888888777665225555665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       424  (0.0236488); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2165.02
//
Query:       EPX72427.1  [L=376]
Description: acetylglucosaminyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.5e-05   24.7   3.6      8e-05   22.3   3.4    1.9  1  Glyco_transf_8  Glycosyl transferase family 8
  ------ inclusion threshold ------
       0.08   12.6   0.0        1.6    8.3   0.0    2.2  2  STD1            STD1/MTH1


Domain annotation for each model (and alignments):
>> Glyco_transf_8  Glycosyl transferase family 8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   3.4   8.9e-09     8e-05      29     221 ..     104     318 ..      60     335 .. 0.74

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 8.9e-09
  Glyco_transf_8  29 awfalnfhiltaeievenleklnklassykevlellesdkksledfesklklrspkylsllnylRlylpelfpkldkilylDaDvvvqgdlseLw 123
                     +++   ++++t ++e+ ++e+l+  +  +k v++l+ +d  +  +   +  ++ +  +s  ++ +l+++e+  +++++ ++D+D+++ ++++e +
      EPX72427.1 104 KSKFPVIVMATRGVEDWKVEQLKVDGAIVKVVDPLYAQDVVD--N--VNDMAVLDTRWSR-MFTKLRIFEM-YEYERLCFVDSDILPIRNMDEVF 192
                     555566677999999999999999999999999999998744..3..4777888888886.69********.89********************* PP

  Glyco_transf_8 124 dldlk.gkvlaaved.........................krfkkylnksepliaenfkpe..acyFnaGvllfdldewrkenitetlikwlnln 190
                     d+  +   +l   e                            + + +   +   + ++ p+  ++yFnaG+++f++   +++ ++  l  + +++
      EPX72427.1 193 DVREQtSAYLSSFELlnklrrfldgkrfredfsaydlrrkDFYPYVFAAVSDPGSWHDTPPqfQDYFNAGLFVFHPSTAHYKRLMT-LARFPKMY 286
                     *****5666665555*********************97752233333333333333333332279***********9999988874.44555555 PP

  Glyco_transf_8 191 ekrtllklgdqdilnivfk....gkvkeldkkynv 221
                      k      ++q +ln +        +++ld +yn 
      EPX72427.1 287 DK---ANMMEQSLLNFAYSsageFPWQPLDWTYNG 318
                     55...788999999988874444458888888885 PP

>> STD1  STD1/MTH1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.0   0.00018       1.6      60     128 ..      63     132 ..      36     144 .. 0.76
   2 ?    1.8   0.0     0.017   1.6e+02      50      85 ..     275     317 ..     244     319 .. 0.75

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00018
        STD1  60 elkksllndellyngrpeeLiDWelNkiRSlLileklPsrpewgnslpeiv...kslpqfrfvlLpldssde 128
                  ++ +ll ++++ +++++ + DW  N +R  L++ +l ++pe ++++p iv         ++  L++d    
  EPX72427.1  63 AFVTMLLASSVTADENNQPVQDWYYNATR--LLVYRLSHYPETKSKFPVIVmatRGVEDWKVEQLKVDGAIV 132
                 6778888888888888888**********..66777777899999***999554223336666666665555 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.017
        STD1  50 k.....klddmynpeelkksllndellyngrpe...eLiDWelN 85 
                 +     ++ +my+  ++++++l +  +y ++ e   + +DW+ N
  EPX72427.1 275 RlmtlaRFPKMYDKANMMEQSLLNF-AYSSAGEfpwQPLDWTYN 317
                 133455899*********9998755.777776666668888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (376 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       398  (0.0221987); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2642.51
//
Query:       EPX72428.1  [L=375]
Description: acetylglucosaminyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    0.00016   21.3   2.1    0.00046   19.8   2.1    1.6  1  Glyco_transf_8   Glycosyl transferase family 8
  ------ inclusion threshold ------
       0.02   14.2   0.1      0.031   13.6   0.1    1.3  1  Mannosyl_trans3  Mannosyltransferase putative


Domain annotation for each model (and alignments):
>> Glyco_transf_8  Glycosyl transferase family 8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   2.1   5.2e-08   0.00046       7     220 ..      84     323 ..      79     338 .. 0.75

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 5.2e-08
  Glyco_transf_8   7 dknYllgasvviksllknakepawfalnfhiltaeievenleklnklassykevlellesdkksledfesklklrspkylsllnylRlylpelfp 101
                     d+ Y  ++  +++ l+ + + ++   +++  + +++++ ++++l+k + +++ v+++   d  ++      ++ +  ++ +  ++ +l ++e   
      EPX72428.1  84 DDVYFNATRLLVYRLIHHPETKSQYPVHIL-VMKGVDEWKIDRLRKDGANIIMVDRVRTEDLVDE-----GQSITPGSNRYEYMFTKLSVFEQ-T 171
                     567888999999999999997555555555.6678999999999999999988866655555443.....3455556666667899*******.* PP

  Glyco_transf_8 102 kldkilylDaDvvvqgdlseLwdldlkgkvlaaved...............................krfkkylnksepliaenfkp..eacyFn 163
                     ++dk+  lD+D ++ ++++++++++       a  +                               + + + +  s+  +  +  p  ++++Fn
      EPX72428.1 172 QFDKVCILDSDLLIRKNIDDIFQTPYRYTSPEALDTnrlplfqkpdddddedyqfidnfelygsskeEFYPYLIAASDDRNPGHPTPpePSDTFN 266
                     ***************************7777777779*************************9999744444444555555555444115689** PP

  Glyco_transf_8 164 aGvllfdldewrkenitetlikw.lnlnekrtllklgdqdilnivfk....gkvkeldkkyn 220
                     aG++l+++ + + + i   + +  + ++ +      ++q +ln++ +      + ++d++yn
      EPX72428.1 267 AGLMLVHPSKLHLHRIKMIARYPyMYEYAR-----MMEQSLLNLAYNaygwFPWTRIDFSYN 323
                     ********9998888876665542333333.....567777766665444467888888888 PP

>> Mannosyl_trans3  Mannosyltransferase putative
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   3.5e-06     0.031      25     145 ..     103     231 ..      87     304 .. 0.57

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 3.5e-06
  Mannosyl_trans3  25 algnkLPIeivikkeelekefcekilpaaeepkqevwfvnakcvlnedylgkefk......gfqnKalAll.fssFeevllLDaDnvplknpdk 111
                      ++++++P+ i++  + +++  ++++ +       ++++v+   + +    g++++      ++ +  l+++  + F++v +LD+D ++ kn+d+
       EPX72428.1 103 ETKSQYPVHILVM-KGVDEWKIDRLRK----DGANIIMVDRVRTEDLVDEGQSITpgsnryEYMFTKLSVFeQTQFDKVCILDSDLLIRKNIDD 191
                      5778888888776.6666666777766....44455555533322222222333366677778888888773578******************* PP

  Mannosyl_trans3 112 lFese.eYkk......tglllwkdrdlwkrstspkfyeiae 145
                      +F+++  Y++      + l l++ +d  + + + +f++ +e
       EPX72428.1 192 IFQTPyRYTSpealdtNRLPLFQKPDDDDDE-DYQFIDNFE 231
                      **98633544111111445567666664444.444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (375 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       395  (0.0220313); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2750.87
//
Query:       EPX72429.1  [L=226]
Description: 20S proteasome component beta 1 Pre3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-48  164.8   1.0    1.8e-48  164.6   1.0    1.0  1  Proteasome  Proteasome subunit


Domain annotation for each model (and alignments):
>> Proteasome  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.6   1.0     1e-52   1.8e-48       2     189 ..      22     202 ..      21     203 .. 0.96

  Alignments for each domain:
  == domain 1  score: 164.6 bits;  conditional E-value: 1e-52
                 HHS-EEEEEEETTEEEEEEEEEEEETTEEEESSSSTSEEEEETTEEEEEEESHHHHHHHHHHHHHHHHHHHHHHSSGTCHHHHHHHHHHHHHHHHHHCT CS
  Proteasome   2 kkGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigvafaGlaaDartlvrraraeaqlyrlrygrpipverlvarvaaklqaytqrsg 100
                 + Gtt+ ++k+++gv+laad+r+t+g++++++ t +K+ +++d+i+++ +G+aaD++++++++++ +++y+++yg  ++v+     +aa+l++++++ +
  EPX72429.1  22 RMGTTITALKYNEGVILAADSRTTMGAYIANRVT-DKLTQLTDNIWCCRSGSAADTQAVADILKYYLSMYEVQYGITPTVH-----TAATLASEMCYTN 114
                 57***************************88886.**********************************************.....999********** PP

                 TTTTSEEEEEEEEETTTEEEEEEEETTSEEEEESSEEEES.TTHHHHHHHHHHHHSTTBSHHHHHHHHHHHHHHHHHHBTTSCSSEEEEE CS
  Proteasome 101 rrpfgvslliagvdeeggpeLyqidpsGsyieekdavaiG.sgseaaktalekeykedltleeavelavkalkealerdklsgknievav 189
                 ++++ ++l+i+g+de+ g e+y+i   Gs++++    aiG sgs ++++++++++ke++t++eave+ + a+  a+erd +sg++i++++
  EPX72429.1 115 KNMLSAGLIIGGYDEKTGGEVYSIPLGGSLHKQP--LAIGgSGSAFIYGFCDANFKENMTKDEAVEFLKFAVALAMERDGSSGGTIRMVI 202
                 ********************************94..66666**********************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       394  (0.0219756); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1674.54
//
Query:       EPX72430.1  [L=546]
Description: AGC/PDK1 protein kinase Ppk21 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.8e-59  201.3   0.0    2.4e-59  200.9   0.0    1.2  1  Pkinase        Protein kinase domain
    2.7e-33  115.4   0.0    3.6e-33  114.9   0.0    1.1  1  Pkinase_Tyr    Protein tyrosine kinase
    3.6e-05   22.9   0.1    5.4e-05   22.3   0.1    1.2  1  Haspin_kinase  Haspin like kinase domain
     0.0024   17.8   0.0     0.0048   16.9   0.0    1.5  1  APH            Phosphotransferase enzyme family
      0.003   16.9   0.0      0.012   14.9   0.0    2.0  2  Kinase-like    Kinase-like
     0.0045   16.4   0.0     0.0078   15.6   0.0    1.3  1  Kdo            Lipopolysaccharide kinase (Kdo/WaaP) family
  ------ inclusion threshold ------
      0.026   14.1   0.0      0.059   13.0   0.0    1.5  1  RIO1           RIO1 family
      0.029   14.0   0.1       0.27   10.8   0.0    2.1  2  FTA2           Kinetochore Sim4 complex subunit FTA2
      0.058   12.2   0.0      0.094   11.5   0.0    1.2  1  YukC           WXG100 protein secretion system (Wss), protein


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  200.9   0.0   1.2e-62   2.4e-59       4     264 .]      57     314 ..      54     314 .. 0.94

  Alignments for each domain:
  == domain 1  score: 200.9 bits;  conditional E-value: 1.2e-62
                 EEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHS.CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHHH CS
     Pkinase   4 leklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklk.hpnivrlyevfeekdelylvleyveggeladllerkgslseeea 100
                    +G Gs++kV +a++k++ k++A+K+++k+ + k+++ k v  E   + +l+  p i rl+++f+++ +ly vley+++gel +++++ + l+e+ +
  EPX72430.1  57 GDIIGDGSYSKVKRATDKRSWKEYAIKVLDKRYIVKENKvKYVNIERDSMMRLNgYPGIARLFHTFQDDLKLYYVLEYAPNGELLHYIKKYRFLNEASV 155
                 678*******************************99999899999********************************************999******* PP

                 HHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS........BCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHH CS
     Pkinase 101 kkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk........ltsfvgtseYlAPEvlkeneyskkvDvWslGvilyell 191
                 +++a++il+++e++Hs giiHrDlKpeNiL+d++ ++KitDFG ak l  +           +sfvgt eY+APE+l+++ +sk++DvW+ ++++++++
  EPX72430.1 156 QFYAAEILSSIEFMHSCGIIHRDLKPENILFDHNMHIKITDFGTAKILPPKYAnspdstmfSSSFVGTAEYVAPELLSKQVVSKSSDVWAFACVVFQMI 254
                 ************************************************99999999****99************************************* PP

                 HSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 192 tgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 tg+ppf+g++       ++++      i+   +++++ ++ ++ e+  l +++++ + ++R++++el+q +++
  EPX72430.1 255 TGSPPFHGRDPGV----IFRK------IM---SLDYDLPKLMPIEMVPLFTSIFRLQTTERPSIRELKQFSFF 314
                 *******444433....4444......33...5689999999**************************99887 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.9   0.0   1.8e-36   3.6e-33       3     257 ..      56     310 ..      54     311 .. 0.86

  Alignments for each domain:
  == domain 1  score: 114.9 bits;  conditional E-value: 1.8e-36
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSS.HHHHHHHHH.HHHHHHTS.-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeat.eeekeelle.eakimkkl.khpnivkllgvctkeepllivteyvkgGdLlkfLrkkek 97 
                  +g+ +G G+++kV ++t k    ++  + a+K+l++++  +e+k + ++ e + m++l   p i +l     ++ +l+ v+ey+++G+Ll++++k   
   EPX72430.1  56 FGDIIGDGSYSKVKRATDK----RSWKEYAIKVLDKRYIvKENKVKYVNiERDSMMRLnGYPGIARLFHTFQDDLKLYYVLEYAPNGELLHYIKKY-- 147
                  56789***********999....7778899999966554144455666569999999989**********************************98.. PP

                  TTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEET....TTS.SEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHH CS
  Pkinase_Tyr  98 ekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardi....ekd.deyvkkeeaklpvkWmapEslkekkftsksDvWs 190
                  + l+  ++  +a+++ + +e+++s  ++Hrdl   N+L ++n+++ki+DfG a+ +     ++ d++  +++     +++apE l++++++++sDvW+
   EPX72430.1 148 RFLNEASVQFYAAEILSSIEFMHSCGIIHRDLKPENILFDHNMHIKITDFGTAKILppkyANSpDSTMFSSSFVGTAEYVAPELLSKQVVSKSSDVWA 245
                  88999999999****************************************99987332112202223444455678999****************** PP

                  HHHHHHHHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 191 fGvllwEiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfselve 257
                  f+ +++ ++t g+ p++g ++  +++k+ +    + p+ +p e+  l ++ ++ + +eRp+++el +
   EPX72430.1 246 FACVVFQMIT-GSPPFHGRDPGVIFRKIMS-LDYDLPKLMPIEMVPLFTSIFRLQTTERPSIRELKQ 310
                  **********.********99999999954.345667788***********************9975 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.1   2.7e-08   5.4e-05     143     257 ..      78     203 ..      67     218 .. 0.82

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 2.7e-08
  Haspin_kinase 143 kelslkelkslklvkgtypglllllqdkvlkek.........pdfyseqqlflvlllkdkGtdLeevklkswkqalsifwqivkiLyvaE..tkfe 227
                    ke  +k l +  +vk    + + + +d +++ +           f+++ +l+ vl+   +G+ L  +k   + +  s+ +  ++iL+  E   +  
     EPX72430.1  78 KEYAIKVLDKRYIVKENKVKYVNIERDSMMRLNgypgiarlfHTFQDDLKLYYVLEYAPNGELLHYIKKYRFLNEASVQFYAAEILSSIEfmHSCG 173
                    5666666666677777766777777777777778888888878899999******************999999999999999********333456 PP

  Haspin_kinase 228 FEHRdLhldniLvdknlnvtlidlklsRle 257
                      HRdL+ +niL d+n+++ + d+  +++ 
     EPX72430.1 174 IIHRDLKPENILFDHNMHIKITDFGTAKIL 203
                    88**********************999875 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   2.4e-06    0.0048     167     201 ..     173     205 ..     146     207 .. 0.89

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 2.4e-06
                 EEE-SS-SGGGEEEC..TTEEEEE---TT-EEEEC CS
         APH 167 vllHgDlhpgNllvdpddgrvtGviDfedaglgpp 201
                 +++H+Dl+p N+l+d ++ ++  + Df++a++ pp
  EPX72430.1 173 GIIHRDLKPENILFD-HNMHI-KITDFGTAKILPP 205
                 69*************.77777.8*******99887 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.51     1e+03      12      44 ..      52      84 ..      45     103 .. 0.84
   2 !   14.9   0.0   6.3e-06     0.012     157     258 ..     166     268 ..     139     313 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.51
  Kinase-like 12 rtlvrgellkkgdrsvvfevkdqetgeplavkv 44
                   ++ g+++++g  s+v +++d+   ++ a+kv
   EPX72430.1 52 NDYIFGDIIGDGSYSKVKRATDKRSWKEYAIKV 84
                 567788999999999999999999988888887 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 6.3e-06
  Kinase-like 157 aanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvlsevekgfaPpEllgsrgg..ytrknktkmthkldaWqlGlviyriwclklPltl 252
                  +  +++ g++h +++++n+l+d++  +++++f+       k+  ++   +     ++g +     +   k  ++ + d+W+   v++ +     P+  
   EPX72430.1 166 IEFMHSCGIIHRDLKPENILFDHNMHIKITDFGTAKILPPKYA-NSPDSTMFSSSFVGTAEYvaPELLSKQVVSKSSDVWAFACVVFQMITGSPPFHG 262
                  5668999*************************99988888888.555555555566666444222233566789999************999999998 PP

  Kinase-like 253 ateeak 258
                    ++++
   EPX72430.1 263 RDPGVI 268
                  888765 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   3.9e-06    0.0078     108     166 ..     143     197 ..     134     219 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 3.9e-06
         Kdo 108 llakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDl 166
                 +++k++ l+e++ +    ++   i+ +h+ g+ H+dl + nil++ +     +i + D+
  EPX72430.1 143 YIKKYRFLNEASVQFYAAEILSSIEFMHSCGIIHRDLKPENILFDHNM----HIKITDF 197
                 5555555667777777778888999*******************9987....7777777 PP

>> RIO1  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   2.9e-05     0.059      92     150 ..     138     198 ..     130     206 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2.9e-05
                 TEEGGBHHHCG.-.HHHHHHHHHHHHHHHHHHHHTSTEEESS-STTSEEEETT.EEEE--GT CS
        RIO1  92 gvaapklkdve.e.eeeaeelyeevleemrklykeaglvHaDLSeyNvlvded.kvviIDvs 150
                 g  +  +k+++   e+  + +++e+l+  + +++ +g++H DL   N+l+d++ ++ i D++
  EPX72430.1 138 GELLHYIKKYRfLnEASVQFYAAEILS-SIEFMHSCGIIHRDLKPENILFDHNmHIKITDFG 198
                 555666777775424444555566666.577777*******************999999986 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.18   3.6e+02      22      75 ..      52     106 ..      45     119 .. 0.68
   2 ?   10.8   0.0   0.00014      0.27     177     204 ..     158     185 ..     140     201 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.18
        FTA2  22 kdiefleyLgkglhsiVlkvkirgk..eYALKlFrfleaeeleeaeedlkipreal 75 
                 +d+ f +++g+g  s V ++  +++  eYA+K+  + +    e++ ++ +i+r ++
  EPX72430.1  52 NDYIFGDIIGDGSYSKVKRATDKRSwkEYAIKVLDKRYIV-KENKVKYVNIERDSM 106
                 6677778888899999998877765559999987655432.335555555555555 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00014
        FTA2 177 qlpkllrdlkklhklgIvvrDlkeenyi 204
                 ++ ++l+ ++ +h++gI++rDlk+en++
  EPX72430.1 158 YAAEILSSIEFMHSCGIIHRDLKPENIL 185
                 5689*********************986 PP

>> YukC  WXG100 protein secretion system (Wss), protein YukC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   4.7e-05     0.094      77     110 ..     174     207 ..     129     215 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 4.7e-05
                 SEE---SGGGEEE-TTS-EEES--EETTTBS--- CS
        YukC  77 rltlilhPeNlvfdknlepkilhrgvkeslppye 110
                  ++  l+PeN++fd+n+++ki   g  ++lpp  
  EPX72430.1 174 IIHRDLKPENILFDHNMHIKITDFGTAKILPPKY 207
                 47889**************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (546 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       374  (0.0208601); expected 358.6 (0.02)
Passed bias filter:                      307  (0.0171231); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.60u 0.22s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 3825.77
//
Query:       EPX72431.1  [L=413]
Description: GTPase activating protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-35  121.3   0.2      8e-35  120.4   0.2    1.5  1  RabGAP-TBC  Rab-GTPase-TBC domain
  ------ inclusion threshold ------
      0.065   13.4   0.0       0.14   12.3   0.0    1.5  1  U-box       U-box domain


Domain annotation for each model (and alignments):
>> RabGAP-TBC  Rab-GTPase-TBC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.4   0.2   8.9e-39     8e-35       7     207 ..     169     363 ..     163     371 .. 0.83

  Alignments for each domain:
  == domain 1  score: 120.4 bits;  conditional E-value: 8.9e-39
  RabGAP-TBC   7 vWklllgyepevkrlkksekkqeksekeksklekseeskelsqIkkDvprtfpes..esfknkqgqnqLeriLkaysiynpevgYcqGmndivaplllv 103
                 +W+ +l +            + + +  ++ ++  +++ ++  qI++Dvprt  ++  ++++++ gq+ L+r+L+ +++y p+vgY+qGm  i+a+ll +
  EPX72431.1 169 AWWSFLMN-----------DCPDPDLVNYYYELCDKICEYDVQIDLDVPRTAATHflFRKRYNGGQRLLFRVLHSVALYLPQVGYVQGMASIAATLL-I 255
                 54444433...........13345555566666666677789***********6668999999**********************************.7 PP

  RabGAP-TBC 104 sldeeeaFwcfvsLlekyklrdlytsslpglkrklkvleellkkkdpklykhlkeegldlelfaikwfltlflrefpletvlrlwD.lll....egekf 197
                 + +ee aF ++v++l++ ++ dl++ +++ l +++  l+  l++  p   khl ++g +++ fa++w+lt+f +++p+ t lr+wD l+l    eg+++
  EPX72431.1 256 YYPEEIAFIMMVNMLQRRGMGDLFSCGFDVLLNAFDNLKSELQYL-P-SGKHLSNIGAEPSAFATRWYLTIFHQCVPFHTQLRIWDlLFLlggnEGQTI 352
                 77**************************99999999999999554.4.48************************************8777887777777 PP

  RabGAP-TBC 198 vllr.valail 207
                  ll+  +la++
  EPX72431.1 353 RLLQaSSLALI 363
                 77775666666 PP

>> U-box  U-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   1.6e-05      0.14      24      68 ..      89     131 ..      86     134 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.6e-05
                 EEEEHHHHHHHHTT.SSB-TTT-SB--GGGSEE-HHHHHHHHHHH CS
       U-box  24 vvvdrstiekhllsrdktdPftrepltqdqlipnlelKekIdefl 68 
                 + + r ++ k++++ + ++P+t+ep + +ql++++el  +I+++ 
  EPX72431.1  89 KLIGRDDLSKYIKE-SVFSPMTNEPEKDQQLLSEREL-SRIEKWK 131
                 567899********.*********************9.6899996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (413 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       480  (0.0267723); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2866.54
//
Query:       EPX72432.1  [L=174]
Description: ARP2/3 actin-organizing complex subunit Arc21 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      8e-77  257.2   0.0    8.9e-77  257.0   0.0    1.0  1  P21-Arc   ARP2/3 complex ARPC3 (21 kDa) subunit


Domain annotation for each model (and alignments):
>> P21-Arc  ARP2/3 complex ARPC3 (21 kDa) subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  257.0   0.0   4.9e-81   8.9e-77       1     174 []       1     174 []       1     174 [] 0.98

  Alignments for each domain:
  == domain 1  score: 257.0 bits;  conditional E-value: 4.9e-81
     P21-Arc   1 mpayhssfneeeevrlvgnlallplktkvrgpapkadeeeediidealelFranvlfrnfeikgeaDrvLiYlilfisecLkklkkstskeeaekelat 99 
                 mpayhssf +  +v + gnla+lplktk+rgpa+ ad +++diide+++lFran++frnfeikg+aDr+LiY++lfisecL kl+  +s ++ae++l++
  EPX72432.1   1 MPAYHSSFLSIPNVPTTGNLAMLPLKTKFRGPAYPADANQMDIIDECISLFRANCFFRNFEIKGPADRTLIYGTLFISECLGKLT-GMSCRDAERHLNS 98 
                 9***********************************************************************************9.8999********* PP

     P21-Arc 100 lalenfaiPgdagfpLnslyekpkskeeadllrqYlkqlrqelalrllervyedd.ekpskwWlafakrkFmnksL 174
                 lalenf+iPg +gfpLn+ly++p+s+++++l+r+Yl+q+rqela rll++vy+++ ++pskwW++f+kr+Fmnk+L
  EPX72432.1  99 LALENFSIPGSPGFPLNALYSPPTSTQDSELMRSYLTQFRQELAFRLLSHVYASEkTHPSKWWTCFSKRRFMNKAL 174
                 ****************************************************666589****************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       249  (0.0138881); expected 358.6 (0.02)
Passed bias filter:                      225  (0.0125495); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.42
# Mc/sec: 1244.05
//
Query:       EPX72433.1  [L=370]
Description: methyltransferase N2227 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.1e-107  359.3   0.4   1.6e-107  358.8   0.4    1.2  1  N2227            N2227-like protein
  ------ inclusion threshold ------
      0.062   13.1   0.0       0.13   12.1   0.0    1.6  1  Methyltransf_23  Methyltransferase domain


Domain annotation for each model (and alignments):
>> N2227  N2227-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  358.8   0.4  1.8e-111  1.6e-107       4     271 ..      93     361 ..      90     362 .. 0.97

  Alignments for each domain:
  == domain 1  score: 358.8 bits;  conditional E-value: 1.8e-111
                 S----HHHHHHHHHHHHHHHHHH-STTHHHHHHHHHHHHHHHHHHS-T......T-EEEEET-TT-HHHHHHHHTT-EEEEEE--HHHHHHHHHHHHS- CS
       N2227   4 vvlasrldmskvrstlrqivRdwsaegkeERealykpiieelkelvpseskerekvkilvPGaGlGrlavelatkgyqvegnEfsyfmllasefiLnav 102
                  +++s+++m+kv+stl+q++Rdws+e  +ER+++y pi++el++l+p + ++r++++ilvPG+GlGrla+++a++g++++gnEfsyfmll+s+++Ln+v
  EPX72433.1  93 LPHVSSEMMQKVCSTLKQLARDWSEESVNERQVTYVPILRELDSLFPARLTDRSQIRILVPGSGLGRLAFDIAAQGFSCQGNEFSYFMLLTSHYMLNCV 191
                 5688999******************************************************************************************** PP

                 --TT-EEE-TTTT--SS-SSGGGGG--EEE-SS------TTS--EEEEES-HHHHH--SSHTT-EEEEEEES-TTSSS-HHHHHHHHHHHEEEEEEEEE CS
       N2227 103 keenqitiypfvhsfsnqlsrddqlrkvkipDveplselkrkknlsmaagdflevykeeeaaesydvvvtcfFiDtaeNvleYletiekvlkpgglwiN 201
                 ++ n++ti+p++hsfsn+++rd+q  +v+ipDv p+++l++ + +smaagdf+evy++++++++++vvvtcfFiDta+Nvl+Yl+ i+++l +gg+wiN
  EPX72433.1 192 STVNEFTIHPYIHSFSNHVTRDNQAAEVAIPDVVPAEYLNQGAFFSMAAGDFIEVYGDKSSENQFHVVVTCFFIDTAKNVLNYLDVIKNTLADGGYWIN 290
                 *************************************************************************************************** PP

                 EE----TTTTTT.SEEEEE.----HHHHHHHHHHS-EEEEEEEEEEEE-SS-STT--S---EEEEEEEEEE- CS
       N2227 202 lGPLlYhfedlt.vadevs.ielsleeilalakkvgfkvlkeekeiesgYltnkesmlqlkYklvffvlrke 271
                 +GPLlYhfe+    ++e+  iel+l+++l++++++gf+vlk+ +   + Y+ +++sml++ Y+ +f+v+r +
  EPX72433.1 291 VGPLLYHFENDCeSQNENPtIELTLDQLLHVMDSMGFEVLKHDS-CTTSYMGDSRSMLEWIYHPHFWVSRIQ 361
                 *********77545555536***********************9.99*********************9976 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   1.4e-05      0.13      20     116 ..     144     289 ..     121     334 .. 0.62

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 1.4e-05
  Methyltransf_23  20 lraggrvLdiGcGtGillevlrengfsvtgvDlspeaveiae..............................kakkaqkdqfdeqeaae..... 78 
                      +r++ r+L  G G G+l+  ++++gfs+ g + s  +                                                 a++     
       EPX72433.1 144 DRSQIRILVPGSGLGRLAFDIAAQGFSCQGNEFSYFMLLTSHymlncvstvneftihpyihsfsnhvtrdnqA-------------AEVaipdv 224
                      5555566666777776666666666655555555433333225555555666666666644443222222221.............22233334 PP

  Methyltransf_23  79 ...........................pqgkfdlIvlrevlehvpdppellrqiatllkpgGyll 116
                                                 ++++f ++v  +++ + +++  +l+ i++ l++gGy +
       EPX72433.1 225 vpaeylnqgaffsmaagdfievygdksSENQFHVVVTCFFIDTAKNVLNYLDVIKNTLADGGYWI 289
                      444444333334444444444455554777********************************966 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (370 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       663  (0.0369792); expected 358.6 (0.02)
Passed bias filter:                      509  (0.0283898); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 2617.32
//
Query:       EPX72434.1  [L=614]
Description: fimbrin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-77  257.2   0.2    8.3e-20   71.0   0.0    4.1  4  CH         Calponin homology (CH) domain
    2.8e-08   33.5   0.0      0.017   14.9   0.0    4.2  4  CAMSAP_CH  CAMSAP CH domain
    1.1e-07   30.8   2.1     0.0034   16.8   0.0    3.7  3  EF-hand_1  EF hand
    1.5e-07   31.7   1.9      3e-07   30.8   0.6    2.2  2  EF-hand_7  EF-hand domain pair
    0.00016   21.4   0.6       0.38   10.6   0.1    2.8  2  EF-hand_8  EF-hand domain pair
    0.00097   18.9   1.9        1.8    8.7   0.1    3.9  3  EF-hand_6  EF-hand domain
  ------ inclusion threshold ------
      0.038   13.5   3.2        6.1    6.5   0.2    3.4  3  EF-hand_5  EF hand
       0.12   12.5   0.4         19    5.5   0.0    3.6  4  CH_2       CH-like domain in sperm protein


Domain annotation for each model (and alignments):
>> CH  Calponin homology (CH) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.4   0.0   3.6e-20   8.1e-17       2     106 ..     113     231 ..     112     233 .. 0.91
   2 !   68.0   0.1   3.1e-22     7e-19       2     108 ..     262     364 ..     261     365 .. 0.95
   3 !   71.0   0.0   3.7e-23   8.3e-20       3     107 ..     387     494 ..     385     496 .. 0.93
   4 !   51.8   0.0   3.3e-17   7.5e-14       4     105 ..     511     613 ..     509     614 .] 0.96

  Alignments for each domain:
  == domain 1  score: 61.4 bits;  conditional E-value: 3.6e-20
                 HHHHHHHHHHHHHHTTSTTSSTT.......SCHHHHHTTSHHHHHHHHHHSTTTSSGGGSTTT.......HHHHHHHHHHHHHHHHHHTTCHTTSS-HH CS
          CH   2 eqkkellrWinshleeagpkvkv.......edfeedlrDGvlLckLlnklapglvdkkklnks.......efkkleNinlaldvaekklgvpkvlieae 86 
                 e+++e+++ +ns+l ++ +  +         +f+++++DG++L kL+n   p+++d++ lnk        +fk +eN n ++++a+   g++ ++i+a 
  EPX72434.1 113 EERREFIKHVNSVLVGDADLGERipintetFEFFDQCKDGLILSKLINDSVPDTIDERVLNKPknqkpldNFKSIENNNVVINSAKAMGGISITNIGAG 211
                 6788999999999987655443347799889999**************************9999**********************9999********* PP

                 HHHTTSHHHHHHHHHHHHHH CS
          CH  87 dlvegknksvltllaqLfra 106
                 dl eg+++++l+l++q++r+
  EPX72434.1 212 DLLEGREHLILGLVWQIIRR 231
                 ******************97 PP

  == domain 2  score: 68.0 bits;  conditional E-value: 3.1e-22
                 HHHHHHHHHHHHHHTTSTTSSTTSCHHHHHTTSHHHHHHHHHHSTTTSSGGGSTTTHHHHHHHHHHHHHHHHHHTTCHTTSS-HHHHHTTSHHHHHHHH CS
          CH   2 eqkkellrWinshleeagpkvkvedfeedlrDGvlLckLlnklapglvdkkklnksefkkleNinlaldvaekklgvpkvlieaedlvegknksvltll 100
                 +++k l+rW+n hl+ a+++++v++f++d +DG  +  Lln+lap+l++ + l  + ++ l++++++l+  e kl+++k+l  a+ +v g++k++l+++
  EPX72434.1 262 PPEKILIRWFNFHLNAANWHRRVSNFSKDVSDGENYTVLLNQLAPELCSRAPL--QIQNVLQRAEKVLENSE-KLNCRKYL-SATAMVAGNPKLNLAFV 356
                 5899*******************************************888777..78999*********888.********.***************** PP

                 HHHHHHHH CS
          CH 101 aqLfrafq 108
                 a+Lf++++
  EPX72434.1 357 AHLFNTHP 364
                 ****9986 PP

  == domain 3  score: 71.0 bits;  conditional E-value: 3.7e-23
                 HHHHHHHHHHHHHTTSTTSSTTSCHHHHHTTSHHHHHHHHHHSTTTSSGGGSTTT........HHHHHHHHHHHHHHHHHHTTCHTTSS-HHHHHTTSH CS
          CH   3 qkkellrWinshleeagpkvkvedfeedlrDGvlLckLlnklapglvdkkklnks........efkkleNinlaldvaekklgvpkvlieaedlvegkn 93 
                 + + ++ W+ns l  +   +++ df+++lrDG +L++  +k++pg+v++k++nk         +fk++eN+n+a+d+ + + g+++v i+ +d+ +g  
  EPX72434.1 387 EARVFTLWLNS-L--D-VVPSIHDFFNNLRDGCILLQAYDKITPGTVNWKRINKPpasgdemlRFKAVENCNYAVDLGK-EQGFSLVGIQGADINDGSR 480
                 567899*****.4..2.456789*****************************999*********************888.******************* PP

                 HHHHHHHHHHHHHH CS
          CH  94 ksvltllaqLfraf 107
                 +++l+l++q++r++
  EPX72434.1 481 TLTLALVWQMMRMN 494
                 ***********986 PP

  == domain 4  score: 51.8 bits;  conditional E-value: 3.3e-17
                 HHHHHHHHHHHHTTSTTSSTTSCHH.HHHTTSHHHHHHHHHHSTTTSSGGGSTTT..HHHHHHHHHHHHHHHHHHTTCHTTSS-HHHHHTTSHHHHHHH CS
          CH   4 kkellrWinshleeagpkvkvedfe.edlrDGvlLckLlnklapglvdkkklnks..efkkleNinlaldvaekklgvpkvlieaedlvegknksvltl 99 
                 ++++++W ns+ ++ g+++++++f+  +l++G++ +++l+ ++ + vd++ +++   e+ +++N++la+++a+ klg   +   +ed+v+++++++l++
  EPX72434.1 511 DNDMVAWANSMAAKGGKGSHIRSFRdPSLSNGIFVLDVLHGIKSEYVDYSLVTDGstEELAIQNTRLAISIAR-KLGAVIFI-LPEDIVNVRPRLILHF 607
                 5789*********************99*************************9889**************999.*****999.**************** PP

                 HHHHHH CS
          CH 100 laqLfr 105
                 + +L+ 
  EPX72434.1 608 IGSLMA 613
                 *99986 PP

>> CAMSAP_CH  CAMSAP CH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0      0.11   2.4e+02      14      39 ..     143     168 ..     133     215 .. 0.75
   2 !    5.8   0.0    0.0056        12       9      50 ..     280     321 ..     275     342 .. 0.79
   3 !   14.9   0.0   7.7e-06     0.017       5      53 ..     396     443 ..     392     453 .. 0.89
   4 !    5.4   0.0    0.0072        16      19      84 ..     538     599 ..     525     600 .. 0.79

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.11
   CAMSAP_CH  14 edllrdlsdGvaLaalihfYcPqlik 39 
                 +++    +dG+ L +li+   P++i+
  EPX72434.1 143 FEFFDQCKDGLILSKLINDSVPDTID 168
                 56677899**********99999997 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0056
   CAMSAP_CH   9 lippvedllrdlsdGvaLaalihfYcPqliklediclkesms 50 
                 + + v+++ +d+sdG   + l++ + P+l      ++++++ 
  EPX72434.1 280 WHRRVSNFSKDVSDGENYTVLLNQLAPELCSRAPLQIQNVLQ 321
                 6788*************9999999999987766666666655 PP

  == domain 3  score: 14.9 bits;  conditional E-value: 7.7e-06
   CAMSAP_CH   5 rslplippvedllrdlsdGvaLaalihfYcPqliklediclkesmslad 53 
                 +sl+ +p+++d+  +l+dG+ L++      P +++++ i+ k+ +s ++
  EPX72434.1 396 NSLDVVPSIHDFFNNLRDGCILLQAYDKITPGTVNWKRIN-KPPASGDE 443
                 678889*********************************9.88877665 PP

  == domain 4  score: 5.4 bits;  conditional E-value: 0.0072
   CAMSAP_CH  19 dlsdGvaLaalihfYcPqliklediclkesmsladslyNiqllqefcerkLgnsvfhltleDllyv 84 
                 +ls+G+ ++ ++h    + ++ + ++  +  + ++ ++N +l+ + + rkLg  +f + +eD++ v
  EPX72434.1 538 SLSNGIFVLDVLHGIKSEYVDYSLVT--DGSTEELAIQNTRLAISIA-RKLGAVIF-ILPEDIVNV 599
                 79******************999999..99999********998765.66744444.467777665 PP

>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.1    0.0016       3.7       5      18 ..      24      37 ..      21      39 .. 0.87
   2 !   16.8   0.0   1.5e-06    0.0034       1      25 [.      55      79 ..      55      83 .. 0.92
   3 ?    4.1   0.0     0.017        39       4      17 ..     141     154 ..     140     155 .. 0.92

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0016
                HHHHHTTTSSSEEE CS
   EF-hand_1  5 iFrefDkDgdGkId 18
                 F+ +D+Dg G++d
  EPX72434.1 24 QFNRLDVDGKGYLD 37
                59**********99 PP

  == domain 2  score: 16.8 bits;  conditional E-value: 1.5e-06
                HHHHHHHHHTTTSSSEEEHHHHHHH CS
   EF-hand_1  1 elkeiFrefDkDgdGkIdfeEfkel 25
                e++e++re+D D +G+++ e+f+ +
  EPX72434.1 55 EVREAIREVDIDSSGRVEAEDFVGI 79
                79********************976 PP

  == domain 3  score: 4.1 bits;  conditional E-value: 0.017
                 HHHHHHTTTSSSEE CS
   EF-hand_1   4 eiFrefDkDgdGkI 17 
                 e F+ fD+ +dG I
  EPX72434.1 141 ETFEFFDQCKDGLI 154
                 68**********98 PP

>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   0.6   1.3e-10     3e-07       5      70 ..      22      80 ..      20      81 .. 0.87
   2 ?   -2.0   0.0       2.2     5e+03      48      61 ..     141     154 ..     107     155 .. 0.65

  Alignments for each domain:
  == domain 1  score: 30.8 bits;  conditional E-value: 1.3e-10
   EF-hand_7  5 keaFkelDtdgdgyldkeellrllrkifqgagegsklsdeelellfkefDtdkdGvisfdEFlkly 70
                 + F+ lD+dg gyld++   ++++      +  +  + +e+++ ++e+D d++G++  ++F+ +y
  EPX72434.1 22 TDQFNRLDVDGKGYLDQAATIKAFE------DSHKG-TYDEVREAIREVDIDSSGRVEAEDFVGIY 80
                678****************555777......66666.8899*********************9877 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 2.2
   EF-hand_7  48 llfkefDtdkdGvi 61 
                 + f+ fD+ kdG i
  EPX72434.1 141 ETFEFFDQCKDGLI 154
                 67777888888876 PP

>> EF-hand_8  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   0.1   0.00082       1.8      17      53 ..       4      46 ..       1      48 [. 0.79
   2 !   10.6   0.1   0.00017      0.38      23      50 ..      51      78 ..      42      81 .. 0.89

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00082
   EF-hand_8 17 lglkk...glseeevdil...frefDtdgdGkisfeEFcvlle 53
                l+l+k   gls+ee+ +l   f+++D dg+G++++  ++  +e
  EPX72434.1  4 LKLQKkftGLSNEEILSLtdqFNRLDVDGKGYLDQAATIKAFE 46
                4667778899999987777779************987776666 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00017
   EF-hand_8 23 lseeevdilfrefDtdgdGkisfeEFcv 50
                 + +ev++ +re+D+d +G++  e+F+ 
  EPX72434.1 51 GTYDEVREAIREVDIDSSGRVEAEDFVG 78
                5669**********************85 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.1   0.00079       1.8       5      20 ..      24      39 ..      20      50 .. 0.82
   2 !    5.4   0.0    0.0095        21       1      27 [.      55      81 ..      55      86 .. 0.87
   3 ?    1.3   0.1      0.19   4.4e+02       4      17 ..     141     154 ..     140     157 .. 0.88

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00079
   EF-hand_6  5 aFklfDkdgdGkidae 20
                 F+ +D+dg G++d++
  EPX72434.1 24 QFNRLDVDGKGYLDQA 39
                59************86 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.0095
   EF-hand_6  1 elreaFklfDkdgdGkidaeElrkalr 27
                e+rea ++ D d +G + ae+++ ++ 
  EPX72434.1 55 EVREAIREVDIDSSGRVEAEDFVGIYD 81
                57899999**************98875 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.19
   EF-hand_6   4 eaFklfDkdgdGki 17 
                 e F+ fD+ +dG i
  EPX72434.1 141 ETFEFFDQCKDGLI 154
                 5799********87 PP

>> EF-hand_5  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.2    0.0027       6.1       3      17 ..      23      37 ..      21      39 .. 0.89
   2 ?    5.6   0.0    0.0052        12       3      21 ..      58      76 ..      56      80 .. 0.87
   3 ?   -0.7   0.1      0.53   1.2e+03       3      16 ..     141     154 ..     138     154 .. 0.73

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0027
                HHHHHH-SS-SSCE- CS
   EF-hand_5  3 dtFqaiDlNgDGkIs 17
                d F+++D++g G+++
  EPX72434.1 23 DQFNRLDVDGKGYLD 37
                56**********998 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.0052
                HHHHHH-SS-SSCE-HHHH CS
   EF-hand_5  3 dtFqaiDlNgDGkIskeEL 21
                ++ +++D + +G++ +e +
  EPX72434.1 58 EAIREVDIDSSGRVEAEDF 76
                56899***********988 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.53
                 HHHHHH-SS-SSCE CS
   EF-hand_5   3 dtFqaiDlNgDGkI 16 
                 +tF+ +D  +DG I
  EPX72434.1 141 ETFEFFDQCKDGLI 154
                 39*****8777765 PP

>> CH_2  CH-like domain in sperm protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       2.4   5.3e+03      16      42 ..     144     170 ..     134     195 .. 0.62
   2 ?    5.5   0.0    0.0085        19       6      40 ..     276     310 ..     267     345 .. 0.81
   3 ?    0.9   0.0      0.22   4.8e+02       4      40 ..     394     430 ..     392     437 .. 0.86
   4 ?    0.8   0.0      0.24   5.5e+02      20      56 ..     538     574 ..     516     589 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 2.4
        CH_2  16 nlkrdfsdGvlvAeilkkyypklvdlh 42 
                 ++  ++ dG+++ ++++   p ++d  
  EPX72434.1 144 EFFDQCKDGLILSKLINDSVPDTIDER 170
                 555667788888888888888766643 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.0085
        CH_2   6 qsldlsrsvknlkrdfsdGvlvAeilkkyypklvd 40 
                 +  + +r+v+n+++d+sdG     +l+++ p+l++
  EPX72434.1 276 NAANWHRRVSNFSKDVSDGENYTVLLNQLAPELCS 310
                 44778999*************99999999999765 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.22
        CH_2   4 WlqsldlsrsvknlkrdfsdGvlvAeilkkyypklvd 40 
                 Wl+sld+  s+ ++ +++ dG+++ +   k+ p +v+
  EPX72434.1 394 WLNSLDVVPSIHDFFNNLRDGCILLQAYDKITPGTVN 430
                 *********************9998888887777665 PP

  == domain 4  score: 0.8 bits;  conditional E-value: 0.24
        CH_2  20 dfsdGvlvAeilkkyypklvdlhnysngsslaaklnN 56 
                  +s+G+ v  +l+ +  + vd +  ++gs+ +  ++N
  EPX72434.1 538 SLSNGIFVLDVLHGIKSEYVDYSLVTDGSTEELAIQN 574
                 59******************99988888877777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (614 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       551  (0.0307323); expected 358.6 (0.02)
Passed bias filter:                      525  (0.0292822); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.56u 0.24s 00:00:00.80 Elapsed: 00:00:00.39
# Mc/sec: 4782.50
//
Query:       EPX72435.1  [L=160]
Description: hypothetical protein SOCG_00198 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       399  (0.0222544); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.22s 00:00:00.59 Elapsed: 00:00:00.36
# Mc/sec: 1338.70
//
Query:       EPX72436.1  [L=463]
Description: Spo4-Spo6 kinase complex regulatory subunit Spo6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.6e-28   99.5   0.0    4.9e-28   97.9   0.0    1.9  1  Dfp1_Him1_M  Dfp1/Him1, central region
    4.8e-17   61.8   2.0      1e-16   60.8   2.0    1.6  1  zf-DBF       DBF zinc finger
    7.6e-06   26.2   0.1    1.3e-05   25.4   0.1    1.4  1  BRCT         BRCA1 C Terminus (BRCT) domain
  ------ inclusion threshold ------
      0.016   15.2   0.0      0.029   14.3   0.0    1.4  1  PTCB-BRCT    twin BRCT domain
      0.046   14.1   0.1       0.14   12.6   0.0    1.8  2  BRCT_2       BRCT domain, a BRCA1 C-terminus domain
      0.073   13.4   0.2       0.17   12.3   0.2    1.5  1  zf-C2H2_2    C2H2 type zinc-finger (2 copies)


Domain annotation for each model (and alignments):
>> Dfp1_Him1_M  Dfp1/Him1, central region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.9   0.0   1.6e-31   4.9e-28       1     126 [.     171     285 ..     171     286 .. 0.92

  Alignments for each domain:
  == domain 1  score: 97.9 bits;  conditional E-value: 1.6e-31
  Dfp1_Him1_M   1 dilskArelkmkiWsleKl.qrvLknllekdsekkkakaaakskaakeeedLsqlLkneklyGpsdrdptakrkdlhyFkgpyvlveDleqelrpiiv 97 
                  d l+ A++ +mkiWs++Kl +r+L ++l++ds  +++           +++L++lL+ ek+yG s+++  + +k++ yF++++++v+D++q ++pi++
   EPX72436.1 171 DFLHLAKKANMKIWSIDKLlNRILFTFLDPDSLGNTS-----------ASSLQALLDGEKVYGASEKNFYVPSKNVEYFQENFLCVRDITQFYKPIVL 257
                  789***************989********99955433...........568*********************************************** PP

  Dfp1_Him1_M  98 reykkeakkekdgewPvlrsttegrcpFv 126
                  re+++ ++++ +  wP+l +t +grcpF 
   EPX72436.1 258 REWERPTHNT-EILWPTLGMTVQGRCPFN 285
                  ***8877777.889**************6 PP

>> zf-DBF  DBF zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.8   2.0   3.3e-20     1e-16       2      44 ..     413     455 ..     412     456 .. 0.96

  Alignments for each domain:
  == domain 1  score: 60.8 bits;  conditional E-value: 3.3e-20
      zf-DBF   2 ksGYCEnCrvkfedleeHlksekHrkFaenssnfeelDelisk 44 
                 k+GYCEnC++++ dle+Hl+ ++Hr+F+en+ nf++lDe+ s+
  EPX72436.1 413 KAGYCENCCERYRDLEKHLQGRRHRAFSENNGNFASLDEFFSQ 455
                 89**************************************998 PP

>> BRCT  BRCA1 C Terminus (BRCT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.1   4.5e-09   1.3e-05       4      76 ..     114     190 ..     111     193 .. 0.88

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 4.5e-09
                 TTTTTEEEEEEESTSSHHHHHHHHHHHHTTCEEESSCSTTSSEEEESSS.....HSHHHHHHHHHHTTSEEEETHHHH CS
        BRCT   4 llfhgckfvitgvldnftrdeleelikehGGkvttevskktthlvvgep.....esrslkylealklnipivheewll 76 
                 + f +++f++  + d++ +  + ++i ++G+kvtt +s ++th+++  +     +s s  +  a+k n +i +++ ll
  EPX72436.1 114 TAFPNFVFYL-DSIDEEIKRRIIQKICSLGAKVTTTFSFEITHFITTRTvdperCSPSDFLHLAKKANMKIWSIDKLL 190
                 5699******.8888888888888*********************888888899999999***********9998776 PP

>> PTCB-BRCT  twin BRCT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   9.6e-06     0.029       3      42 ..     121     160 ..     119     183 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 9.6e-06
                 EEEECB-TTCHHHHHHHHHHTT-EEESSEETT-SEEEECS CS
   PTCB-BRCT   3 icvtgysgddrkslqklieamGaeyskdltksvTHLicks 42 
                 +++  ++++ + ++ + i ++Ga+++++++ ++TH+i ++
  EPX72436.1 121 FYLDSIDEEIKRRIIQKICSLGAKVTTTFSFEITHFITTR 160
                 5677788888999999999******************865 PP

>> BRCT_2  BRCT domain, a BRCA1 C-terminus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       5.8   1.7e+04      32      51 ..      35      54 ..      33      66 .. 0.67
   2 ?   12.6   0.0   4.7e-05      0.14       4      51 ..     115     161 ..     113     187 .. 0.82

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 5.8
      BRCT_2 32 GGevvetitsavyiviaesn 51
                +Ge+++t  +   ++  + +
  EPX72436.1 35 DGEICQTTANPESCMDWPVS 54
                69999998777666555555 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 4.7e-05
      BRCT_2   4 lFeglrFYindaepspsreklkklIeknGGevvetitsavyiviaesn 51 
                  F ++ FY+ d+++++ ++++ ++I + G +v+ t + + +++i++++
  EPX72436.1 115 AFPNFVFYL-DSIDEEIKRRIIQKICSLGAKVTTTFSFEITHFITTRT 161
                 68899****.99999******************999888777777765 PP

>> zf-C2H2_2  C2H2 type zinc-finger (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.2   5.5e-05      0.17      44      95 ..     405     455 ..     399     459 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 5.5e-05
   zf-C2H2_2  44 rekieekleClyCekefkslealreHmkkkgHckineeeeeekkeiekfydf 95 
                 ++k++ + +  yCe+ ++  ++l++H++ ++H+ ++ e++ + + +++f+  
  EPX72436.1 405 HKKVKVDAKAGYCENCCERYRDLEKHLQGRRHRAFS-ENNGNFASLDEFFSQ 455
                 577788888889*99999****************96.677888999999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (463 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       534  (0.0297841); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3205.56
//
Query:       EPX72437.1  [L=371]
Description: NADH pyrophosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.4e-16   59.8   0.0    6.6e-16   58.8   0.0    1.6  1  NUDIX-like     NADH pyrophosphatase-like rudimentary NUDIX do
    3.9e-13   49.6   0.0      2e-12   47.3   0.0    1.9  2  NUDIX          NUDIX domain
    3.2e-06   26.7   1.3    6.1e-06   25.8   1.3    1.4  1  zf-NADH-PPase  NADH pyrophosphatase zinc ribbon domain


Domain annotation for each model (and alignments):
>> NUDIX-like  NADH pyrophosphatase-like rudimentary NUDIX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.8   0.0   1.1e-19   6.6e-16       2     102 .]      47     176 ..      25     176 .. 0.81

  Alignments for each domain:
  == domain 1  score: 58.8 bits;  conditional E-value: 1.1e-19
  NUDIX-like   2 arfllfrrgrllves.....................eeseeelllpadssaalvgkdseelvfLGldeg........gapvfAvdvsareeeikeaeee 71 
                 ++fl+f+++ + ++                      +e++ + l++++s +a    +++ lvfLG+de+          +vfA+dv++ ee +k+++++
  EPX72437.1  47 TKFLPFSDLNPALNVkeeklftlsypqiskyfhvspFEISDKQLAEKYSNHAF---SLPSLVFLGNDENgnagqeweHNNVFALDVTEIEELQKLVQDS 142
                 44555555555555577777777777777777777777777777777777776...8999*****99999******99********************* PP

  NUDIX-like  72 ggafvelRavm...lalsaedaalaaqAralldW 102
                 g++fv+lR ++   ++l+a+d++++a+Ar+lldW
  EPX72437.1 143 GAVFVNLRDIFsqgYKLQASDSGVCAFARSLLDW 176
                 ********************************** PP

>> NUDIX  NUDIX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.21   1.2e+03      86     122 ..     104     140 ..      75     148 .. 0.65
   2 !   47.3   0.0   3.4e-16     2e-12      12     119 ..     238     337 ..     228     348 .. 0.78

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.21
                 EEEEEEECSGCSSTSTTTEEEEEEEEHHHH.HHHHTHC CS
       NUDIX  86 yvfleevegelepndenevsevrwvpleel.lkeklaa 122
                 +vfl+++e  ++ + e e+ +v  ++++e+  ++kl++
  EPX72437.1 104 LVFLGNDENGNAGQ-EWEHNNVFALDVTEIeELQKLVQ 140
                 67776666666666.77777777777777754444444 PP

  == domain 2  score: 47.3 bits;  conditional E-value: 3.4e-16
                 ETTSEEEEEEESSSSTTT.EESSEEECBTTSHHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEEEEEEEE.EEEEEEEEE.EEECSGCSSTSTTTEEEE CS
       NUDIX  12 nekgevLlvrrskkpfpg.WelPgGkvepgEtpeeAArREleEEtGleaellellgrlhylapydgpygd.eheilyvfl.eevegelepndenevsev 107
                 ++k  + l r + +++pg ++  +G++epgE++eeA+ RE+ EE Gle+e + +++      +  +p++  +  +l +f+ ++++ ++  +++ e+++v
  EPX72437.1 238 DMK-SIALGRAA-RHPPGlYACLAGFLEPGESIEEAVSREVYEESGLEVEKVLYYT------S--QPWPFpQSLMLGCFAiAKKDAKISMDKDLELENV 326
                 444.36677777.*****77899************************997777777......2..45555377777777789***************** PP

                 EEEEHHHHHHHH CS
       NUDIX 108 rwvpleellkek 119
                 r+++  el +  
  EPX72437.1 327 RFFTRSEL-LNS 337
                 ********.333 PP

>> zf-NADH-PPase  NADH pyrophosphatase zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   1.3     1e-09   6.1e-06       2      25 ..     179     202 ..     178     204 .. 0.93

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 1e-09
  zf-NADH-PPase   2 thrFCgrCGaptepaeggwarvCp 25 
                    +++FC+ CG++++p +gg+++vC+
     EPX72437.1 179 RYKFCPGCGSRNMPTQGGTKLVCS 202
                    789********************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (371 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       420  (0.0234257); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2772.28
//
Query:       EPX72438.1  [L=709]
Description: telomere binding protein Rap1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    0.00068   20.2   0.9      0.023   15.3   0.0    2.8  2  Rap1-DNA-bind    Rap1, DNA-binding
  ------ inclusion threshold ------
      0.016   15.4   0.0       0.04   14.1   0.0    1.7  1  Myb_DNA-binding  Myb-like DNA-binding domain
      0.019   15.4   0.0      0.068   13.6   0.0    2.0  1  BRCT_2           BRCT domain, a BRCA1 C-terminus domain
      0.071   13.9   0.1       0.29   11.9   0.1    2.1  1  VAPB_antitox     Putative antitoxin


Domain annotation for each model (and alignments):
>> Rap1-DNA-bind  Rap1, DNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0     5e-06     0.023      51      75 ..     146     170 ..      94     179 .. 0.77
   2 ?    1.9   0.4     0.074   3.3e+02       5      58 ..     500     583 ..     497     601 .. 0.58

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 5e-06
  Rap1-DNA-bind  51 arefFkelakkkprHtensWrdryr 75 
                     ++++kela+k+p+Ht +sWr+ y+
     EPX72438.1 146 GVNMYKELARKYPQHTAESWREHYK 170
                    46789999**************997 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.074
  Rap1-DNA-bind   5 edDyaLatevkkqfl.akikqkdpdtgeslikdedlkellakrklt...............................varefFkel 58 
                    +dD +++++++  ++ ++ik++ ++ +++++++ +   + ++  +t                               +ar++ k++
     EPX72438.1 500 DDDAEFEKQITTTYSsSPIKAEIQKADNRSETNRE--AFSGSSPDTsdsrsfidrsssppesptagshdhgisnnllIARNILKNF 583
                    79999999998766515566665555555544444..3333323333334444666666666666666666666666666666666 PP

>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   8.9e-06      0.04       4      42 ..     125     169 ..     122     172 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 8.9e-06
                      SBHHHHHHHHHHHHH.....HTTC..HHHHHHHHTSS-HHHHHHHH CS
  Myb_DNA-binding   4 WteeEdelLleavkk.....hGnr..WkkIaerlggRtekqcrsrw 42 
                      ++ e++++L+e+v+k      G    +k+ a++++ +t+++ r+++
       EPX72438.1 125 FSLEDEKILVEYVHKanvpnSG-VnmYKELARKYPQHTAESWREHY 169
                      899************6655555.056**************999998 PP

>> BRCT_2  BRCT domain, a BRCA1 C-terminus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.5e-05     0.068      55      84 ..      75     104 ..      47     105 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.5e-05
      BRCT_2  55 laekrkrrvvspkyIkdCikkgkllpleny 84 
                 l+    +r+v+++++  Ci++++ll ++ +
  EPX72438.1  75 LKYAILQRIVKVSWLSKCIEQQELLQVDAF 104
                 66677899*****************99876 PP

>> VAPB_antitox  Putative antitoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   6.5e-05      0.29      17      45 ..     640     672 ..     637     698 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 6.5e-05
  VAPB_antitox  17 KregeSFsdvIerLle.....kkkkgkkkellel 45 
                   + e++SFsdv+++L +     + ++++k+e++++
    EPX72438.1 640 RHENKSFSDVLRELHDylvtiE-SSSNKQEIDDA 672
                   789***********77655532.33445555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (709 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       681  (0.0379832); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 5198.97
//
Query:       EPX72439.1  [L=442]
Description: zuotin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-24   87.1   1.7    1.2e-24   87.1   1.7    3.4  5  RAC_head    Ribosome-associated complex head domain
    9.3e-18   64.1   2.4    2.5e-17   62.7   2.4    1.8  1  DnaJ        DnaJ domain
  ------ inclusion threshold ------
       0.12   11.1  37.4       0.19   10.5  18.5    2.0  2  Caldesmon   Caldesmon


Domain annotation for each model (and alignments):
>> RAC_head  Ribosome-associated complex head domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.6   0.9         3   1.8e+04       4      11 ..      65      72 ..      60      78 .. 0.48
   2 ?   -2.1   0.2       1.3   8.1e+03      14      25 ..     130     141 ..     111     166 .. 0.55
   3 ?   -4.7   2.7         3   1.8e+04       1      22 [.     254     275 ..     248     278 .. 0.68
   4 ?   -6.5   5.8         3   1.8e+04       3      14 ..     307     318 ..     289     331 .. 0.67
   5 !   87.1   1.7     2e-28   1.2e-24       1      95 [.     340     436 ..     340     439 .. 0.96

  Alignments for each domain:
  == domain 1  score: -4.6 bits;  conditional E-value: 3
                XXXXX-HH CS
    RAC_head  4 KeaaKkal 11
                K+++K+++
  EPX72439.1 65 KDEKKEEV 72
                23333333 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.3
                 HHHHHHHHHHHT CS
    RAC_head  14 ekralrgavkda 25 
                 +k+a  g+++d 
  EPX72439.1 130 DKKAATGNINDD 141
                 344444444444 PP

  == domain 3  score: -4.7 bits;  conditional E-value: 3
                 XXXXXXXX-HHHHHHHHHHHHH CS
    RAC_head   1 KKaKeaaKkalKKekralrgav 22 
                 KK++ + +k++ ++  +lr++v
  EPX72439.1 254 KKNRSERQKNKARDNARLRQLV 275
                 6666666666666666677666 PP

  == domain 4  score: -6.5 bits;  conditional E-value: 3
                 XXXXXX-HHHHH CS
    RAC_head   3 aKeaaKkalKKe 14 
                 a+eaa +a+KK+
  EPX72439.1 307 AREAAAAAQKKK 318
                 455555555554 PP

  == domain 5  score: 87.1 bits;  conditional E-value: 2e-28
                 XXXXXXXX-HHHHHHHHHHHHHHHTGGGSSSS--.HHHHHHHHHHHHHHHHH--HHHHHHHHHHHTT--..-HHHHHHHHHHHHHHHHHTTSS-GGG CS
    RAC_head   1 KKaKeaaKkalKKekralrgavkdanYFadgeaekakvidkvLedvdllieklddeeLaelaekleaak..daeevkavfkeevkelveagklkeek 95 
                 KKaKe++Kka+K++k+ +++a+kd+nYF++++ ++++++d+vL+d+d+l+ kl d eLa+la++++a+k   a++vk vf++ +k ++e+g+l+ ++
  EPX72439.1 340 KKAKEDKKKAQKRDKKIVKNALKDFNYFSETDVPSPTQVDTVLKDTDALMPKLGDGELASLAADITAQKdsGAAAVKGVFDKYAKMFIERGSLNPSE 436
                 9******************************************************************9756899*****************998765 PP

>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.7   2.4   4.2e-21   2.5e-17       1      63 []      97     164 ..      97     164 .. 0.93

  Alignments for each domain:
  == domain 1  score: 62.7 bits;  conditional E-value: 4.2e-21
                 HHHHHHTSSTT...G-HHHHHHHHHHHHHHHSTTTS..CCHHHHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ   1 dyYeiLgvskd...asedeIkkaYrklalkyHPDkn..pkdpeaeekFkeineAyevLsdpekRkqYD 63 
                 d+Y++Lg+sk    a+ ++Ikka+ k++lk+HPDk+  +++ + +  Fk+i++A e+L+d++kR+qYD
  EPX72439.1  97 DHYAVLGLSKYrykATLEQIKKAHLKKVLKHHPDKKaaTGNINDDSFFKCIQKANEILTDATKRRQYD 164
                 89********988899******************885566669999*********************9 PP

>> Caldesmon  Caldesmon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7  10.9   0.00044       2.6     119     247 ..      47     175 ..      33     181 .. 0.62
   2 ?   10.5  18.5   3.2e-05      0.19      61     195 ..     246     369 ..     234     416 .. 0.48

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.00044
   Caldesmon 119 rrkeryrdeeeeeeeteekekereekkqaeskeeeeeekaeaeeeaeeeeeekkvdesedkevseelkdeeskqvleekka.ieeskkqngaeeeveaa 216
                  r++r  ++  e+e+ e+k++++ee k++ + eee+ +  +a+ +  ++++  +v    +   + +l++  +k+ l++  + ++++k++ g+ +  ++ 
  EPX72439.1  47 ARRQRHGRTFSEDERLEKKDEKKEEVKEESEDEEEDPSMLQADPKDWKQQDHYAVLGLSKYRYKATLEQI-KKAHLKKVLKhHPDKKAATGNIND-DSF 143
                 4666666666777777778888888875555555555555555555555555555444333333333333.444444444404666666665555.888 PP

   Caldesmon 217 lkktkktertlseasan.aedeedeeakleae 247
                  k  +k + +l++a++  + d+ de+a++ea 
  EPX72439.1 144 FKCIQKANEILTDATKRrQYDSVDENAEVEAP 175
                 88888888888777655588899999999985 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 3.2e-05
   Caldesmon  61 dedqalldrlakreerrqrrlkealerqkeldaeaaeaseerslaeekeeaeeeekssrrkeryrdeeeeeeeteekekereekkqaeskeeeeeekae 159
                  ++++ +++ ++ e+++ +   +a  rq   +a a++ +   +l ++ +e+  +e+ +++++       e   +++k+ke    +++  + ee  +ka 
  EPX72439.1 246 RDNKRYQEKKNRSERQKNKARDNARLRQLVDTALASDPRI--KLFKQ-QEKAAKEARKWERDAG---AREAAAAAQKKKE----EEERIAAEEASAKAA 334
                 2222233333333333333333333333322222222222..11111.1111111222222211...2222222222222....223345566667777 PP

   Caldesmon 160 aeeeaeeeeeekkvdes.edkevseelkdeeskqvle 195
                 a++++++ +e+kk+ ++ ++k v++ lkd     ++e
  EPX72439.1 335 ASAQNKKAKEDKKKAQKrDKKIVKNALKDF--NYFSE 369
                 777888888888877762344566677665..23444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (442 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2642  (0.147359); expected 358.6 (0.02)
Passed bias filter:                      600  (0.0334653); expected 358.6 (0.02)
Passed Vit filter:                       130  (0.00725082); expected 17.9 (0.001)
Passed Fwd filter:                        45  (0.0025099); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.98u 0.31s 00:00:01.29 Elapsed: 00:00:00.46
# Mc/sec: 2890.42
//
Query:       EPX72440.1  [L=167]
Description: transcription corepressor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.3e-20   71.5   1.0    5.3e-20   71.5   1.0    2.4  3  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a
  ------ inclusion threshold ------
      0.033   14.6   0.1      0.033   14.6   0.1    2.3  2  Histone        Core histone H2A/H2B/H3/H4


Domain annotation for each model (and alignments):
>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.5   1.0   5.9e-24   5.3e-20       2      65 .]      11      75 ..      10      75 .. 0.98
   2 ?    2.3   0.3     0.022     2e+02      34      53 ..      81     100 ..      79     102 .. 0.86
   3 ?   -3.6   0.0       1.6   1.4e+04      38      50 ..     123     135 ..     123     137 .. 0.71

  Alignments for each domain:
  == domain 1  score: 71.5 bits;  conditional E-value: 5.9e-24
                   XXXHHHHHHHHHCC.TTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHHH CS
  CBFD_NFYB_HMF  2 eLPiarvkkImksd.pdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehiklAv 65
                   +LP+a+v+k++ ++ p++ +++k+ ++l+ ec++efi+ ++seA+eic+ke++Kti+aehi +A+
     EPX72440.1 11 SLPKATVQKMVSEMlPEDLTFTKETRDLLIECCVEFIHLVSSEANEICEKESKKTIAAEHIIKAL 75
                   7**************************************************************97 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.022
                    HHHHHHHHHHHHHHHCCTTS CS
  CBFD_NFYB_HMF  34 eefieelaseAaeickkekr 53 
                    +e+i+e+++ Aae+ +++k 
     EPX72440.1  81 KEYISEVLEVAAEHKEQQKN 100
                    699*********99988876 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 1.6
                    HHHHHHHHHHHCC CS
  CBFD_NFYB_HMF  38 eelaseAaeickk 50 
                    eel+s+A e+++ 
     EPX72440.1 123 EELLSRARERFQN 135
                    5778888888775 PP

>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.1   3.6e-06     0.033      59     128 ..       9      75 ..       7      77 .. 0.93
   2 ?   -1.5   3.0      0.34     3e+03      65      65 ..     111     111 ..      85     165 .. 0.54

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 3.6e-06
                 SXXSXHHHHHHHHHHHH.TTSSSXEEXHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTXSEEXHHHHHHHH CS
     Histone  59 dlliqklpfaRvvreivksekedlrisaeavlalqealEallvelfeeAnllakhaKRvTitpkDiqlAr 128
                 +l  +k+ ++++v e  +   edl +++e+ ++l e +  ++  + +eAn ++++  ++Ti +++i  A+
  EPX72440.1   9 ELSLPKATVQKMVSEMLP---EDLTFTKETRDLLIECCVEFIHLVSSEANEICEKESKKTIAAEHIIKAL 75 
                 677889999999999999...9********************************************9886 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.34
                 H CS
     Histone  65 l 65 
                  
  EPX72440.1 111 S 111
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2348  (0.130961); expected 358.6 (0.02)
Passed bias filter:                      686  (0.038262); expected 358.6 (0.02)
Passed Vit filter:                        66  (0.00368119); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 1142.61
//
Query:       EPX72441.1  [L=404]
Description: IMP 5'-nucleotidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   6.2e-160  532.6   0.0   6.9e-160  532.4   0.0    1.0  1  ISN1      IMP-specific 5'-nucleotidase


Domain annotation for each model (and alignments):
>> ISN1  IMP-specific 5'-nucleotidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  532.4   0.0  3.9e-164  6.9e-160       1     411 []       1     396 [.       1     396 [. 0.96

  Alignments for each domain:
  == domain 1  score: 532.4 bits;  conditional E-value: 3.9e-164
        ISN1   1 mtsryrveyalkshrrdefiewikgllavpfvlhsqseavaeeeekseakvaeevkrryaeilkdvekliddkielqkekkkekskLklLvPsigkfft 99 
                 m+sryrveyalk+hr+d+fiewikgllavpfvl++ + +++    + +++ +ee+ +rya ilkdve+li+++iel++ + +++s+Lk+LvP+i++f+t
  EPX72441.1   1 MASRYRVEYALKQHRKDNFIEWIKGLLAVPFVLQAGKPSQK----EVTKAKEEETLERYARILKDVERLIESHIELTD-QGHHHSQLKMLVPTITSFWT 94 
                 99*********************************998544....56677889999********************96.67899*************** PP

        ISN1 100 kLpleeaflvedkkraissrrlvaPsfnDvrlilntaqilaltkakklklvtfDGDvtlydDGksleednpvikrllkllkkdvkvgivtaaGy..tea 196
                 +Lpl +a++  + k ++++r +vaPsfnD+r+il  aq+  l++ ++l+lv+fDGDvtly+DG+ l +dnpvi+rl++ll++d +v i+taaGy   + 
  EPX72441.1  95 PLPLVQALYDLEPKLCLAKRSFVAPSFNDIRTILGGAQLRYLAH-HSLELVSFDGDVTLYEDGQPLLADNPVISRLVQLLSRDSYVVILTAAGYpsPSG 192
                 ***************************************99998.79***********************************************77678 PP

        ISN1 197 ekyeerlkGLldalkaseelteeqkenllvmGgesnylfryseeskellklvereeWllpemkaWseedikalldvaekalrelakklklpatilrker 295
                 ++y++r++GLl+a+++s +lt++qk++l+v+Ggesnylf+y+    + l++ve e+W+lp mk+W  ++i+++ld ae+alr+++++l+++a+i+rker
  EPX72441.1 193 KEYMDRFSGLLQAIEDS-DLTDTQKRRLHVLGGESNYLFEYNPL--HGLQWVEPESWMLPIMKTWPADEISQILDSAEEALRSCIRALNIDAKIIRKER 288
                 9**************99.9**********************984..579************************************************** PP

        ISN1 296 avGivpsekevklareqLeevvlvvqkklelseaareikfcafnGGsDvfvDiGdkslGvevlqkyfgkeekaeikkeetlhvGDqflsaganDfkarl 394
                 +vG+ ps  ++kl+reqLee+vl vq++l+l++ +  ++f+afnGG+D+++DiGdk+lGv++lq +f+ +     +++++lhvGDqflsag+nD+kar+
  EPX72441.1 289 SVGFAPSL-GQKLRREQLEETVLEVQTTLQLKNFS--VPFTAFNGGNDIWCDIGDKKLGVHCLQYFFAIS-----HPSKCLHVGDQFLSAGNNDYKARS 379
                 *******9.*********************98876..******************************994.....569********************* PP

        ISN1 395 aattvWiasPaetvell 411
                 aattvW++sP+etve+l
  EPX72441.1 380 AATTVWVSSPSETVEFL 396
                 **************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (404 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       678  (0.0378158); expected 358.6 (0.02)
Passed bias filter:                      630  (0.0351386); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.21s 00:00:00.75 Elapsed: 00:00:00.38
# Mc/sec: 3185.25
//
Query:       EPX72442.1  [L=189]
Description: replication fork protection complex subunit Swi3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-27   94.9   0.1    2.8e-27   94.5   0.1    1.2  1  Swi3      Replication Fork Protection Component Swi3


Domain annotation for each model (and alignments):
>> Swi3  Replication Fork Protection Component Swi3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.5   0.1   1.6e-31   2.8e-27       1      81 [.      57     137 ..      57     139 .. 0.98

  Alignments for each domain:
  == domain 1  score: 94.5 bits;  conditional E-value: 1.6e-31
        Swi3   1 kldeerLlsekGlpaLrknfkklkfkgkgheaedlkkllqfyqlWahrLfPkakfkdflekveklgkkkevktyrkelree 81 
                 k+deerL se+G+p+L++  kk+k+kgkghe+ dlk++l++y+ W+h+L+P+a+f+d ++ +++lg+++ vk  r+ +++e
  EPX72442.1  57 KFDEERLASENGIPKLQRLRKKVKLKGKGHELGDLKRILSMYHIWTHELYPRATFDDSISYLNRLGSTRSVKVRRRGWINE 137
                 78*****************************************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       568  (0.0316805); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.41
# Mc/sec: 1372.87
//
Query:       EPX72443.1  [L=99]
Description: hypothetical protein SOCG_00206 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       509  (0.0283898); expected 358.6 (0.02)
Passed bias filter:                      320  (0.0178482); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.20s 00:00:00.59 Elapsed: 00:00:00.38
# Mc/sec: 772.37
//
Query:       EPX72444.1  [L=122]
Description: U6 snRNP-associated protein Lsm4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-17   62.4   0.0    3.2e-17   62.0   0.0    1.2  1  LSM       LSM domain
     0.0058   16.8   0.0     0.0097   16.0   0.0    1.3  1  SM-ATX    Ataxin 2 SM domain
  ------ inclusion threshold ------
       0.16   11.6   0.3        2.1    8.1   0.0    2.1  2  Hfq       Hfq protein


Domain annotation for each model (and alignments):
>> LSM  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.0   0.0   5.4e-21   3.2e-17       2      65 ..       6      69 ..       5      71 .. 0.96

  Alignments for each domain:
  == domain 1  score: 62.0 bits;  conditional E-value: 5.4e-21
                HHHHTTTSEEEEEETTSEEEEEEEEEEETTSEEEEEEEEEEETTETEEEEEEEEEEEGGGEEEE CS
         LSM  2 flkklinkkvtvelkngrelrGtLkgfDqfmNlvLedveetlkdkkekrklglvliRGnnivli 65
                +l+  +++ ++velkng+++ G L+ +D +mNl L +v+ t++d+++  +l +++iRGnni ++
  EPX72444.1  6 LLNAAQGRPILVELKNGETFNGHLEKCDTYMNLTLHEVIRTMPDGDRFFRLPECYIRGNNIKYL 69
                688899*******************************************************997 PP

>> SM-ATX  Ataxin 2 SM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   1.6e-06    0.0097       6      49 ..       5      46 ..       4      58 .. 0.86

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.6e-06
                HHHHTTTTSEEEEEETTS-EEEEEEEEE-T..T--EEEEEEEET CS
      SM-ATX  6 flltslvGkevevtvknGevyeGifstvslekdfsvvLkmarkv 49
                 ll++  G+++ v++knGe++ G +  +++   ++++L  + ++
  EPX72444.1  5 TLLNAAQGRPILVELKNGETFNGHLEKCDT--YMNLTLHEVIRT 46
                5889999**********************9..888888877665 PP

>> Hfq  Hfq protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.0   0.00035       2.1      14      37 ..      13      36 ..       5      46 .. 0.85
   2 ?    1.3   0.4     0.044   2.6e+02       1      14 [.      71      84 ..      71      86 .. 0.87

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00035
                -EEEEEETTS-EEEEEEEEE-SSE CS
         Hfq 14 ipvtifLvnGiklkGviksfDnft 37
                 p+ + L nG  ++G++++ D ++
  EPX72444.1 13 RPILVELKNGETFNGHLEKCDTYM 36
                689999*****************8 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.044
                HHHHHHHHHHHCT- CS
         Hfq  1 lQdafLnqlrkeki 14
                +Qd++L+q+ k++ 
  EPX72444.1 71 IQDEVLEQVGKQQA 84
                7********99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       481  (0.026828); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 916.53
//
Query:       EPX72445.1  [L=602]
Description: biotin-protein ligase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.6e-84  283.5   0.0    4.5e-84  282.7   0.0    1.4  1  BPL_N          Biotin-protein ligase, N terminal
    3.1e-34  117.7   0.0    5.3e-34  116.9   0.0    1.4  1  BPL_LplA_LipB  Biotin/lipoate A/B protein ligase family
    0.00043   20.1   0.0    0.00091   19.1   0.0    1.5  1  BPL_C          Biotin protein ligase C terminal domain


Domain annotation for each model (and alignments):
>> BPL_N  Biotin-protein ligase, N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  282.7   0.0   7.5e-88   4.5e-84      34     377 .]       2     318 ..       1     318 [. 0.88

  Alignments for each domain:
  == domain 1  score: 282.7 bits;  conditional E-value: 7.5e-88
       BPL_N  34 qtvsakvllkePWastcallVlPgGaDlpYvrelngegnrkikeyVekGGkylGlCAGaYygskrvefevgdkklevvgeReLaffpgtcrGlafkGFk 132
                 ++v+a +l+++PW s+++ll++PgG+Dl+Y+ ++n+ + rki ++V++GG+ylGlCAG+Y++s++vef++ +k+l+v+g+R+L+ffpgtc G++f+GF 
  EPX72445.1   2 RYVDAYTLEHDPWPSNTSLLIIPGGRDLGYCGSFNDLIYRKIIDFVRRGGSYLGLCAGGYFASANVEFRMPNKDLNVIGSRKLQFFPGTCAGPTFSGFA 100
                 689************************************************************************************************ PP

       BPL_N 133 YesekGaravklkvskealkaeeekeefkiyynGggvFvdaeklknkvevLArYaeeldvdsgeakkaAvvlckvgeGkalLtgvhpEfalanlkkqea 231
                 Y+se+Gara+ l+++k    +e ++++++iyynGgg F++ae++ + v+v+ArY+e   v++  +++aA++++ +g+G+++LtgvhpEf +       +
  EPX72445.1 101 YDSEEGARAAPLTLEK----MEGSSRTTRIYYNGGGSFINAESYPK-VRVVARYSE---VEQ--ERSAAIIYIPMGKGHVILTGVHPEFGA-------D 182
                 **************53....455899********************.********9...444..457***********************9.......1 PP

       BPL_N 232 eekeykkvveeleadekaRleflkalLtklgLevneee.eetevpslsplllsslskeeveelleslkeklaaekeeeeevikdendtfrlekedeeea 329
                 +++  +      e+de  Rle++ ++L+ l+++++++  +  ++p+++  +l   ++++ + l++ +ke ++++      ++ d++ +f++++ +++++
  EPX72445.1 183 ANNVLD------ESDEPMRLELIAHMLKLLQIRIPQNIsQCCAQPKVTDQYLFPCNEST-NWLFDGFKEDEIHK------TLYDKTYNFHFKDISDRHK 268
                 222222......37899******************66577899***********99987.78999999955555......899*********9886665 PP

       BPL_N 330 eeaaeeeeee.ked.leevvkeilvvkeeeelpskkltplFdieaYfkeL 377
                  ++  + +++ +++  +e+  ++ ++  +e++  +++ ++Fd++ Y ++L
  EPX72445.1 269 VSNFPAMDHDpTAEsDQETKPSVSICYGNEKIGYEHTKSHFDYNLYQEHL 318
                 555444443344452555566899999999****************9987 PP

>> BPL_LplA_LipB  Biotin/lipoate A/B protein ligase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.9   0.0   8.9e-38   5.3e-34       3     131 .]     331     474 ..     329     474 .. 0.98

  Alignments for each domain:
  == domain 1  score: 116.9 bits;  conditional E-value: 8.9e-38
                    EEES-HHH.HHH..GCGGG--TT-EEEEEEESS-B....-B--B-TTSEEEEEEEEESS...-CCGTHHHHHHHHHHHHHHH......HHTT-TTE CS
  BPL_LplA_LipB   3 evikstnt.llkeslnsselesgglvvvrrqtgGr....nvwhspkgeltyslllspeqktfqnrvlelyvsllvlavlealgyrdskpgiegipv 93 
                    +vi+st+t ++++  ++++l++g++ ++++qt+Gr    n+w+sp+g l++s+++++  ++f++ +++l+++l++l+v++ +  r+++pg+e+ pv
     EPX72445.1 331 PVIRSTQTlFDSNPKFLEKLPTGFTAFANYQTAGRgrgqNMWVSPYGVLAFSFVVNVPSRNFSTVPVALFQYLMALSVVNGI--RNYAPGYENMPV 424
                    79******9999999*******************************************************************..9*********** PP

                    EEETTTEEEE............TTEEEEEEEEEEEETTS-EEEEEEEEEE CS
  BPL_LplA_LipB  94 fikwpnDlyv............ngrKlaGiavtstrgktlhhivigvgvn 131
                    fikwpnD+y+             + K++Gi+vtst++k + h+vig+gvn
     EPX72445.1 425 FIKWPNDVYAavneggtfyqekRYTKISGIIVTSTYEKDVLHLVIGCGVN 474
                    *********************99*************************99 PP

>> BPL_C  Biotin protein ligase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0   1.5e-07   0.00091      12      44 ..     551     592 ..     542     595 .. 0.88

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 1.5e-07
                 SCEEEEEEEEE.-TTSEEEEEETTE...........EEEESSCC CS
       BPL_C  12 dgkveGiavGI.dddGaLllktddg..........lqpdinsGd 44 
                 ++k+  +++GI  d+G+L++++++           lqpd+ns+d
  EPX72445.1 551 GEKA--RIKGItCDFGLLIAELLNDsgianrkdiyLQPDGNSFD 592
                 5555..*****88******************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (602 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       383  (0.021362); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 4453.78
//
Query:       EPX72446.1  [L=262]
Description: DNA repair protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-88  294.4   0.0    2.4e-88  294.1   0.0    1.1  1  Mgm101p   Mitochondrial genome maintenance MGM101


Domain annotation for each model (and alignments):
>> Mgm101p  Mitochondrial genome maintenance MGM101
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  294.1   0.0   1.3e-92   2.4e-88       1     170 []      92     261 ..      92     261 .. 1.00

  Alignments for each domain:
  == domain 1  score: 294.1 bits;  conditional E-value: 1.3e-92
     Mgm101p   1 dweesfkglskkpfskeaadvllapleeedveikpdGllYlpeikYrriLnkafGpggWglaprgetvvtekivtreyaLvvegrlvsearGeqeyfee 99 
                 +w++sf+gls++pfske++++l+apl++edveikpdG+lYlpeikYrriLn+afGpggWglaprg+t+vt+k+v+reyaLv++grlvs+arGeq+yf++
  EPX72446.1  92 NWQTSFYGLSSQPFSKEISSTLTAPLSPEDVEIKPDGILYLPEIKYRRILNNAFGPGGWGLAPRGNTTVTSKSVSREYALVCHGRLVSVARGEQTYFDP 190
                 79************************************************************************************************* PP

     Mgm101p 100 esiptategcksnalmRcCkDlGiaseLWdPefirkfkkkkaeevwvehvttkkkkklwkrkdeeveyPyk 170
                 e+++ta+egcksnalmRcCkDlG+aseLWdP+fir+fk++ + ev+ve+v+tkkk+klw+rk+++++yPyk
  EPX72446.1 191 EGVATASEGCKSNALMRCCKDLGVASELWDPRFIRAFKHERCIEVFVENVMTKKKRKLWRRKEDRFTYPYK 261
                 **********************************************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (262 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       477  (0.0266049); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1864.50
//
Query:       EPX72447.1  [L=167]
Description: HVA22/TB2/DP1 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.6e-21   73.8   1.7    1.4e-20   73.0   1.7    1.4  1  TB2_DP1_HVA22  TB2/DP1, HVA22 family
  ------ inclusion threshold ------
      0.012   15.6   0.0      0.021   14.8   0.0    1.4  1  HTH_36         Helix-turn-helix domain


Domain annotation for each model (and alignments):
>> TB2_DP1_HVA22  TB2/DP1, HVA22 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.0   1.7   1.5e-24   1.4e-20      15      76 ..      37     108 ..      13     109 .. 0.73

  Alignments for each domain:
  == domain 1  score: 73.0 bits;  conditional E-value: 1.5e-24
  TB2_DP1_HVA22  15 s........det.k.wltYWvvfafltvvesladvllswiPfYylfKllfllwlvlpqtqgatyvYekflrp 76 
                             de+ + ++ YW+v++++t +e l+ + ++w+PfY++ K+++ +wl++p+t+g++yvY+++++ 
     EPX72447.1  37 IrnnepktvDEErRrLMAYWCVYGCVTSIEALVGSYIRWVPFYSTTKVVLWIWLLHPKTRGSEYVYQTYIST 108
                    022223333455456******************99999*******************************975 PP

>> HTH_36  Helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   2.3e-06     0.021       9      50 ..      83     125 ..      80     128 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 2.3e-06
      HTH_36   9 lllgslasfankngg.cfpsqetlakrlglsknTvsraikeLe 50 
                  + ++++ +  k+ g  +  q ++++ l ++knT++  + +L+
  EPX72447.1  83 KVVLWIWLLHPKTRGsEYVYQTYISTFLQEHKNTIQGFLEKLV 125
                 4667777777799999********************9999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       616  (0.0343577); expected 358.6 (0.02)
Passed bias filter:                      527  (0.0293937); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.41
# Mc/sec: 1234.32
//
Query:       EPX72448.1  [L=2333]
Description: phosphatidylinositol kinase Tor1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   4.8e-108  361.4   1.5   4.8e-108  361.4   1.5    2.4  3  FAT             FAT domain
    7.8e-70  235.5   0.1    1.9e-69  234.3   0.1    1.7  1  PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
    3.1e-45  154.0   2.5    3.1e-45  154.0   2.5    5.4  6  DUF3385         Domain of unknown function (DUF3385)
    6.8e-39  132.3   0.5    6.8e-39  132.3   0.5    3.1  2  FRB_dom         FKBP12-rapamycin binding domain
    3.2e-17   61.1  14.9      0.059   13.7   0.0   12.2 11  HEAT            HEAT repeat
    8.9e-16   57.4   0.3      2e-15   56.3   0.3    1.6  1  FATC            FATC domain
    8.5e-14   51.7   0.1       0.38   11.2   0.0    8.5  7  HEAT_2          HEAT repeats
    2.9e-05   23.3   1.7    2.9e-05   23.3   1.7    4.3  5  RICTOR_N        Rapamycin-insensitive companion of mTOR, N-te
     0.0014   19.1  20.9       0.17   12.4   0.0   10.1 12  HEAT_EZ         HEAT-like repeat
     0.0027   18.0   1.1         16    5.9   0.1    4.8  4  Cohesin_HEAT    HEAT repeat associated with sister chromatid 
     0.0038   17.8   3.8         23    5.7   0.0    6.0  6  Vac14_Fab1_bd   Vacuolar 14 Fab1-binding region
     0.0075   16.2   0.8        3.7    7.5   0.0    5.4  5  DUF3437         Domain of unknown function (DUF3437)
     0.0078   16.1   1.1     0.0078   16.1   1.1    3.2  3  MOR2-PAG1_C     Cell morphogenesis C-terminal
  ------ inclusion threshold ------
       0.14   12.1   0.0       0.14   12.1   0.0    7.2  8  Sec7_N          Guanine nucleotide exchange factor in Golgi t
        2.9    8.2  12.1        9.7    6.5   0.0    4.7  5  FANCI_S2        FANCI solenoid 2


Domain annotation for each model (and alignments):
>> FAT  FAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1       0.7   8.3e+02      98     270 ..    1272    1305 ..    1201    1315 .. 0.64
   2 !  361.4   1.5  4.1e-111  4.8e-108       1     345 [.    1360    1706 ..    1360    1707 .. 0.95
   3 ?   -3.8   0.0       4.6   5.5e+03     188     233 ..    1874    1918 ..    1853    1935 .. 0.74

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.7
                  -............---TTTTTTT----TTS-TTTGCCCTTTCCCCTCCCHCCCHCHCCS-STTCCCCCCCCHCHHHHCCSTTHHCCCCCHCTT.... CS
         FAT   98 s............sseklksllktWrkRlpgcqdnvevwqdiltvRslvlspiedllkgvkaemwlkfanlarksgrlslAekaLkelleedpeewl 182 
                  +            +++                                                                                 
  EPX72448.1 1272 QqsdaavgmlqyaKQH--------------------------------------------------------------------------------- 1287
                  2222333333333444................................................................................. PP

                  .TT.TSSCCCHHHHHHHCCHHHHHSSCCHHHHCCTSSCCCSS-SS---............HHHHCCCTCCCCCCCCCCCT.S...-SS CS
         FAT  183 prappevvyaylKylwssgeqkealqkLreftsellekkeelqsgleaqkeptnleeftkllarcylkkGewqealqkldwseekiee 270 
                                                                                 + +++k  w e+lq+        ++
  EPX72448.1 1288 ---------------------------------------------------------------KQFNLKETWYEKLQR-------WDD 1305
                  ...............................................................555555555555555.......333 PP

  == domain 2  score: 361.4 bits;  conditional E-value: 4.1e-111
                  CCCTTCCCCTSSSGHHCCCCT....TSSSS--CCCHCCCCHH--CCHCHHCCCHCCCCCCCCCTS---SCCCCCHHHHHCCCCCHHHCHHCCHHCSS CS
         FAT    1 aplaaeaaWrlgqWdsmeeylsvlkkdspdkaffeailalhrnqfdeakeliekarqlldtelsalvgesynraygvlvrvQmlaEleeiiqykqkl 97  
                  aplaa+aaW+lgqWd++ ey+s ++++ ++k+ff+ai+a+h++q ++a  +ie+ r++l+++ls++   synrayg++v+ Qml+Eleeii+yk+++
  EPX72448.1 1360 APLAAAAAWGLGQWDLIGEYVSAMDREPQEKEFFSAIHAVHKRQNEKAYLHIERHRDILVNDLSSIIRGSYNRAYGIMVKSQMLSELEEIIEYKNNE 1456
                  79*********************************************************************************************** PP

                  ----TTTTTTT----TTS-TTTGCCCTTTCCCCTCCCHCCCHCHCCS-STTCCCCCCCCHCHHHHCCSTTHHCCCCCHCTT..........TT.TSS CS
         FAT   98 ssseklksllktWrkRlpgcqdnvevwqdiltvRslvlspiedllkgvkaemwlkfanlarksgrlslAekaLkelleedp.....eewlprappev 189 
                  s + + +sl+ktW+kRl+gcq+nv+vw++ l++R+lv+sp+ +       emw++ anl+r+s+rl+lA k L+ l++ dp      ++l++ +p+v
  EPX72448.1 1457 SFEGNSDSLKKTWKKRLQGCQKNVDVWHNTLRFRALVFSPTHS------PEMWIELANLCRRSDRLKLAGKCLNYLMGRDPskpypIDSLKSINPRV 1547
                  *******************************************......********************************88666455558999** PP

                  CCCHHHHHHHCCHHHHHSSCCHHHHCCTSSCCCSS-SS---................HHHHCCCTCCCCCCCCCCCT.S...-SSCCHHHHCCHHCT CS
         FAT  190 vyaylKylwssgeqkealqkLreftsellekkeelqsgleaq....keptnleeftkllarcylkkGewqealqkldwseekieeilqsysaateid 282 
                  vy+ylK+lw++++++ a+  L+efts l+++++++++   +     ++  ++++ +  larc++k+G+w + lq+ + s+e++ eil sy+ at +d
  EPX72448.1 1548 VYTYLKFLWANNNKEVAVAGLEEFTSYLYSRNKSNRTIPFMDldelSNDYEVSDEQSFLARCFHKQGKWKKMLQR-SMSKEDVTEILISYYNATICD 1643
                  **************************999998733333333366667888899999999****************.89999**************** PP

                  CCCHSTTCCCCHHHHHCCHHHHHHSSSS.S-TCCHHHHCCT..CCHHHHTTTSSTTTCHHHHH CS
         FAT  283 pswykawhtwalfnfevvskeeeqkeeeepedlqeyvvpavkgflksislssenslqdtlRLL 345 
                  ++wykawh+wal+nfevv  +e++   +++e++++y+vpa++gf+ks++ls  nslqd+lRLL
  EPX72448.1 1644 KTWYKAWHSWALVNFEVVGYYEQSDAGIGSEMYSQYIVPAIRGFFKSAALSPRNSLQDILRLL 1706
                  **************************************************************9 PP

  == domain 3  score: -3.8 bits;  conditional E-value: 4.6
                  SSCCCHHHHHHHCCHHHHHSSCCHHHHCCTSSCCCSS-SS---... CS
         FAT  188 evvyaylKylwssgeqkealqkLreftsellekkeelqsgleaqke 233 
                   + + ++K  w++  +++ l +L+++ + +++  +++q +l+ + +
  EPX72448.1 1874 GYDLRRAKNCWKRYLRSDDLTELNQSWDIYYQVFRRIQRQLPKI-K 1918
                  66778999999999999999999999999999988888888776.4 PP

>> PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  234.3   0.1   1.6e-72   1.9e-69       2     249 ..    1981    2229 ..    1980    2230 .. 0.98

  Alignments for each domain:
  == domain 1  score: 234.3 bits;  conditional E-value: 1.6e-72
                      EEEEEECSSCHHHHHHHHHHHHHHHHHHHHTTTTCCCT-------EEESSSSEEEEE--TTEEEHHHHHHHHHHHCTTSTCHHHHH.HHHHCH CS
  PI3_PI4_kinase    2 sagiykvgddlrqdelivqvfklmdeelskennpkrrklalktysviplgrkcgiielvassetaaslldeklekkgvpptasves.lrvald 93  
                      +++++k+++dlrqde+++q+f+l++++l  ++++ +r+l++++y vipl++++g++++v++s+t++sl++ ++ k+ +  + ++++ l++a+d
      EPX72448.1 1981 YQYLLKGHEDLRQDERVMQLFGLCNTLLTTDSETFKRRLSIERYPVIPLSPNSGLLGWVPHSDTLHSLIRDFRAKRHIMLNHEYRMmLQMAPD 2073
                      78999********************************************************************99888888888889999*** PP

                      CHCCHHHHHCC.HHHHHHTSSTTHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHT-TT--TTTEEEETTTSEEEESSTTTCCTCSHC CS
  PI3_PI4_kinase   94 kkklkkekklk.fekrtalkpksgllqeFvkkspsaeewlearkqFvrslaklsvldyilgngDRhldNilvdktsgklihIDfGlilpdewk 185 
                      ++ l++++kl+ fe   a++  ++l++ ++ +sp+ e+wl++r +F++sla +s+++yilg+gDRh++N+++d+ +gk+ihIDf ++++ +++
      EPX72448.1 2074 YDSLTLLQKLEvFEYVLANTDGHDLYHLLWLRSPNSEAWLDRRISFTQSLALMSMVGYILGLGDRHPSNLMMDRYTGKIIHIDFADCFEVAMH 2166
                      ********************************************************************************************* PP

                      SSSS-.SSSSSS-THHHHHHTSTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCCSSC CS
  PI3_PI4_kinase  186 llpfpqekvPfrltrelvlaidpskdeglfresceealealrrdqnlltrllkkavkdglilwe 249 
                      + +fp e +Pfrltr+l++a++ s+  g++  +ce+++++lr++++ l+++l+++v+d+li+w+
      EPX72448.1 2167 RDKFP-EHIPFRLTRMLINAMEVSGIQGTYTITCEHVMRVLRSNTESLMAVLEAFVYDPLINWR 2229
                      *****.*********************************************************7 PP

>> DUF3385  Domain of unknown function (DUF3385)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       6.5   7.7e+03     114     155 ..     150     194 ..     140     199 .. 0.73
   2 ?   -2.4   0.0       3.2   3.8e+03     106     139 ..     313     346 ..     281     370 .. 0.64
   3 !  154.0   2.5   2.6e-48   3.1e-45       1     160 [.     723     879 ..     723     880 .. 0.89
   4 ?    2.3   0.1      0.12   1.4e+02     103     154 ..     904     954 ..     882     959 .. 0.75
   5 ?    1.8   0.5      0.17     2e+02     106     158 ..     990    1039 ..     957    1042 .. 0.68
   6 ?    2.2   0.0      0.13   1.5e+02      13      79 ..    1739    1801 ..    1729    1865 .. 0.68

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 6.5
     DUF3385 114 ifktlglkcvp....fLdqiipallsvirtteesnlrefllqqLat 155
                 i+k+l  ++ +    ++++i ++l  ++r+ ++ ++re+  ++L+ 
  EPX72448.1 150 ILKSLAQNSPTlvylYISEIFQNLWITLRDPKP-SIRETAADALGA 194
                 666655555444555889999999999999888.899988888765 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 3.2
     DUF3385 106 avveaimnifktlglkcvpfLdqiipallsvirt 139
                  + eai  i   ++  ++p+L+ i+  +  ++ t
  EPX72448.1 313 LAFEAIGRIAMAVKEAMIPYLQSILLVIRDTLTT 346
                 5667888888888888888888887766665554 PP

  == domain 3  score: 154.0 bits;  conditional E-value: 2.6e-48
     DUF3385   1 VvdPyleypqLLelLlnilkteqsqsirrevikllGilGALDPykhkqveeraedkkrreeaaretdlsllmvglspsneeyyptvvinaLlrilkdps 99 
                 V++Py++yp LL++L++il++eq ++i+rev+++lG+lGALDPy++   +e+ +dk +++++++++  s+l  + +  + e y++v++ +L++ilkd+s
  EPX72448.1 723 VIEPYMDYPYLLNILIEILQSEQPTPIKREVLRTLGVLGALDPYTYL-ATEQCSDKLQKSQSTHQSFFSHL-PSSQYDSLENYAMVAVVTLVQILKDSS 819
                 9*********************************************5.55566665555555555545555.444556699****************** PP

     DUF3385 100 lsshhaavveaimnifktlglkcvpfLdqiipallsvirtteesnlrefllqqLatLvsiv 160
                 l+ hh++vv+a+m+i+++l+ k+v fL+q++p++l+v+ + ++ +  e ++qqL+tL+siv
  EPX72448.1 820 LAMHHTSVVQAVMHICSQLKFKSVAFLPQLVPTFLQVMTSLSP-SSVELYFQQLTTLTSIV 879
                 ******************************************9.99**************9 PP

  == domain 4  score: 2.3 bits;  conditional E-value: 0.12
     DUF3385 103 hhaavveaimnifktlglkcvpfLdqiipallsvirtteesnlrefllqqLa 154
                     +++ i +i   l+ +   +L+qi++++l+  ++ ++ + r   ++ L+
  EPX72448.1 904 LLLVIIDLIDSIAVALEDEFKFYLPQILSHMLKSFSSDTS-STRVISYKILQ 954
                 566789999999999999*****************98777.55555555555 PP

  == domain 5  score: 1.8 bits;  conditional E-value: 0.17
     DUF3385  106 avveaimnifktlglkcvpfLdqiipallsvirtteesnlrefllqqLatLvs 158 
                  ++++ i + ++   ++     ++ii+ l++++ ++++ +l++++++ L++ vs
  EPX72448.1  990 SALKCISQLLHL--VNFSDHASRIIHPLVRMLTKSNS-ELKMVIMDTLCSVVS 1039
                  444444444443..22244788999999999998776.999999999999887 PP

  == domain 6  score: 2.2 bits;  conditional E-value: 0.13
     DUF3385   13 elLlnilkteqsqsirrevikllGilGALDPykhkqveeraedkkrreeaaretdlsllmvglspsn 79  
                   +L+  ++t+ s+s+r +v +ll+ +G + P      + + ++  ++++ +++ + +++m ++ + +
  EPX72448.1 1739 PQLIARIHTS-STSVRSSVHQLLSDIGRVHPQALV-YSLTVSS--KSTNIQQKHSAKSIMDNMLSHS 1801
                  4555555544.999****************99983.3323222..2233333344444455554444 PP

>> FRB_dom  FKBP12-rapamycin binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1       5.4   6.5e+03      10      72 ..    1561    1621 ..    1557    1639 .. 0.53
   2 !  132.3   0.5   5.7e-42   6.8e-39       1      98 [.    1814    1911 ..    1814    1912 .. 0.99

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 5.4
     FRB_dom   10 hElwhegLeeAsrlyfgeknveamlklleplhellekgpetlreasFaqafgreLkeaeewlk 72  
                  +E    gLee +   +++++ + ++ ++ +l ++l++  e  +e+sF++   ++  + +++l+
  EPX72448.1 1561 KEVAVAGLEEFTSYLYSRNKSNRTIPFM-DL-DELSNDYEVSDEQSFLARCFHKQGKWKKMLQ 1621
                  5667777777666555555555555544.33.4455557788888887654433333333333 PP

  == domain 2  score: 132.3 bits;  conditional E-value: 5.7e-42
     FRB_dom    1 ELiRvAilwhElwhegLeeAsrlyfgeknveamlklleplhellekgpetlreasFaqafgreLkeaeewlkkykkteneedlnqawdiyyevfrri 97  
                  ELiRvAilwhElw+egLeeAs++yf+e+n++ m++++ plhe lekgp+tl+e+sFaq+fg +L++a++++k+y ++ + ++lnq wdiyy+vfrri
  EPX72448.1 1814 ELIRVAILWHELWYEGLEEASQAYFTEHNTSLMIEIITPLHEILEKGPSTLSEVSFAQSFGYDLRRAKNCWKRYLRSDDLTELNQSWDIYYQVFRRI 1910
                  9************************************************************************************************ PP

     FRB_dom   98 k 98  
                  +
  EPX72448.1 1911 Q 1911
                  8 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       2.2   2.7e+03       9      30 ..     135     157 ..     132     158 .. 0.83
   2 !   13.7   0.0   4.9e-05     0.059       5      30 ..     173     198 ..     169     199 .. 0.81
   3 !    8.7   0.1    0.0019       2.3       5      27 ..     484     506 ..     481     508 .. 0.88
   4 ?    3.2   0.0      0.11   1.4e+02       3      24 ..     529     551 ..     527     553 .. 0.79
   5 ?    4.2   0.0     0.055        66       4      28 ..     567     591 ..     565     593 .. 0.88
   6 !    8.1   0.0    0.0031       3.7       1      30 [.     647     676 ..     647     676 .. 0.92
   7 !    8.9   0.1    0.0016       1.9       1      28 [.     689     717 ..     689     719 .. 0.89
   8 ?   -1.0   0.0       2.5     3e+03       1      27 [.     733     760 ..     733     762 .. 0.89
   9 !    8.2   0.0    0.0029       3.5       1      28 [.     970     999 ..     970    1002 .. 0.93
  10 ?    1.1   0.0      0.54   6.5e+02       1      30 [.    1737    1766 ..    1737    1767 .. 0.88
  11 ?    0.2   0.0       1.1   1.3e+03       7      19 ..    1796    1808 ..    1792    1810 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 2.2
                 H.T-SSHHHHHHHHHHHHHHHHC CS
        HEAT   9 l.sDpspeVReaAakaLgalaev 30 
                 l  D   + R+a+++ L  la++
  EPX72448.1 135 LqGDRQEQKRMASVLILKSLAQN 157
                 556888889***********986 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 4.9e-05
                 HHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   5 llkllsDpspeVReaAakaLgalaev 30 
                 l+  l+Dp p++Re+Aa aLga + v
  EPX72448.1 173 LWITLRDPKPSIRETAADALGACLDV 198
                 44458****************98765 PP

  == domain 3  score: 8.7 bits;  conditional E-value: 0.0019
                 HHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAakaLgal 27 
                 +l+ l  ++peVR aAa++++++
  EPX72448.1 484 VLSYLDNDNPEVRIAAARTCCQV 506
                 6888999************9985 PP

  == domain 4  score: 3.2 bits;  conditional E-value: 0.11
                 HHHHHH.HT-SSHHHHHHHHHHH CS
        HEAT   3 Plllkl.lsDpspeVReaAakaL 24 
                   ll+l + D++p++Re+++  L
  EPX72448.1 529 EKLLTLgIADSDPRIRETVLSLL 551
                 566777469*********99877 PP

  == domain 5  score: 4.2 bits;  conditional E-value: 0.055
                 HHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAakaLgala 28 
                 +l  +l+D+  ++Re A+  +g+la
  EPX72448.1 567 CLFIALNDEVFSIREIAIVIIGRLA 591
                 677789**************99998 PP

  == domain 6  score: 8.1 bits;  conditional E-value: 0.0031
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalaev 30 
                 ++ ++l   sDpsp V +a + aLg+la+v
  EPX72448.1 647 IMHVILPKASDPSPGVSSAIISALGELASV 676
                 688899999******************985 PP

  == domain 7  score: 8.9 bits;  conditional E-value: 0.0016
                 HHHHHHHHHT-SSHHH.HHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeV.ReaAakaLgala 28 
                 +++l+l  l+D+s+   R a++k+L +l+
  EPX72448.1 689 FMNLILFSLQDQSSTLkRLASLKCLRQLC 717
                 68999999***888855***********9 PP

  == domain 8  score: -1.0 bits;  conditional E-value: 2.5
                 HHHHHHHHHT-SSHH.HHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspe.VReaAakaLgal 27 
                 ll++l++ l+++ p  + + ++++Lg l
  EPX72448.1 733 LLNILIEILQSEQPTpIKREVLRTLGVL 760
                 7999*********999999999999987 PP

  == domain 9  score: 8.2 bits;  conditional E-value: 0.0029
                 HHHHHHHHH.T-SSHHH.HHHHHHHHHHHH CS
        HEAT   1 llPlllkll.sDpspeV.ReaAakaLgala 28 
                 +lP++++   +D+ p + R++A+k++ +l+
  EPX72448.1 970 VLPVIIRSFeRDTVPLQfRKSALKCISQLL 999
                 69******99******99*********996 PP

  == domain 10  score: 1.1 bits;  conditional E-value: 0.54
                  HHHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT    1 llPlllkllsDpspeVReaAakaLgalaev 30  
                  ++P l+  ++ +s +VR+++ + L ++ +v
  EPX72448.1 1737 VIPQLIARIHTSSTSVRSSVHQLLSDIGRV 1766
                  589999999999********9999999765 PP

  == domain 11  score: 0.2 bits;  conditional E-value: 1.1
                  HHHT-SSHHHHHH CS
        HEAT    7 kllsDpspeVRea 19  
                  ++ls+++  VR+a
  EPX72448.1 1796 NMLSHSDTLVRQA 1808
                  789********98 PP

>> FATC  FATC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.3   0.3   1.6e-18     2e-15       2      32 .]    2303    2333 .]    2302    2333 .] 0.98

  Alignments for each domain:
  == domain 1  score: 56.3 bits;  conditional E-value: 1.6e-18
        FATC    2 LsveqQVdrLIkeATdpeNLaqmyiGWcPww 32  
                  L+v  QV+rLI++AT peNL+++y+GWc +w
  EPX72448.1 2303 LPVKTQVERLIQQATAPENLCRCYVGWCSFW 2333
                  99***************************** PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0       1.3   1.6e+03      22      69 ..      36      85 ..       7      89 .. 0.70
   2 !   10.1   0.0   0.00069      0.83       6      58 ..     133     195 ..     128     230 .. 0.73
   3 !    6.6   0.0    0.0084        10      20      55 ..     462     503 ..     451     530 .. 0.74
   4 !   11.2   0.0   0.00032      0.38       3      69 ..     530     604 ..     525     612 .. 0.82
   5 ?    4.7   0.0     0.034        41      32      60 ..     647     675 ..     621     687 .. 0.82
   6 ?    4.2   0.0     0.048        58      10      60 ..     699     762 ..     690     780 .. 0.71
   7 ?    1.8   0.0      0.27   3.2e+02      32      63 ..    1737    1770 ..    1713    1812 .. 0.65

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 1.3
      HEAT_2 22 raLgrignpealpaLvellededpavRraaaeaLgai...gdpealpaLke 69
                ++L+r++n e+ + ++el+ ++d + R   + a+g++    ++ ++  L +
  EPX72448.1 36 ESLARFNN-EINRRIFELIHSHDIHERFGGILAIGKLieyESDGDITNLSR 85
                45666666.699999999999999999999999997643345666666665 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00069
      HEAT_2   6 qalendpdpevrraairaLg..rignp........ealpaLvellededpavRraaaeaLgai 58 
                 + l+ d  ++ r a +  L    +++p        e+++ L   l+d++p +R++aa+aLga+
  EPX72448.1 133 EWLQGDRQEQKRMASVLILKslAQNSPtlvylyisEIFQNLWITLRDPKPSIRETAADALGAC 195
                 567777888888888888883322344677776667788888889****************97 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.0084
      HEAT_2  20 airaLgrignpea......lpaLvellededpavRraaaeaL 55 
                 a+++Lg+++ + +      ++ ++++l++++p+vR aaa++ 
  EPX72448.1 462 ALETLGTFNFTGYslisftQESVLSYLDNDNPEVRIAAARTC 503
                 67777766666333444458889999999*********9875 PP

  == domain 4  score: 11.2 bits;  conditional E-value: 0.00032
      HEAT_2   3 aLlqalendpdpevrraairaLg.....rignpealpaLvellededpavRraaaeaLgaigd..pe.alpaLke 69 
                 +Ll +   d+dp +r +++  L       +++p+ +++L+ +l+de   +R+ a+  +g++++  p+ + p+L++
  EPX72448.1 530 KLLTLGIADSDPRIRETVLSLLDerfdrHLAHPDNIRCLFIALNDEVFSIREIAIVIIGRLALynPAhVMPSLRK 604
                 45554457***************999877899*************************999873333326677765 PP

  == domain 5  score: 4.7 bits;  conditional E-value: 0.034
      HEAT_2  32 alpaLvellededpavRraaaeaLgaigd 60 
                 ++  +++ ++d++p v  a++ aLg++++
  EPX72448.1 647 IMHVILPKASDPSPGVSSAIISALGELAS 675
                 55667777899999999999999999975 PP

  == domain 6  score: 4.2 bits;  conditional E-value: 0.048
      HEAT_2  10 ndpdpevrraairaLg............rignpealpaLvellededp.avRraaaeaLgaigd 60 
                 + +++  r a +++L              ++ p +l++L+e+l++e p  + r++ ++Lg +g 
  EPX72448.1 699 DQSSTLKRLASLKCLRqlcgasgyviepYMDYPYLLNILIEILQSEQPtPIKREVLRTLGVLGA 762
                 5555556667777777555555555555566667899999999988873699999999987764 PP

  == domain 7  score: 1.8 bits;  conditional E-value: 0.27
      HEAT_2   32 alpaLvellededpavRraaaeaLgaigd..pea 63  
                  ++p L+  + ++++ vR  + + L+ ig+  p+a
  EPX72448.1 1737 VIPQLIARIHTSSTSVRSSVHQLLSDIGRvhPQA 1770
                  5566666666666666666666666665322333 PP

>> RICTOR_N  Rapamycin-insensitive companion of mTOR, N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1       2.4   2.9e+03     241     288 ..     564     608 ..     557     650 .. 0.60
   2 ?   -0.5   0.0      0.41   4.9e+02      24      53 ..     687     717 ..     679     725 .. 0.88
   3 ?   -2.0   0.0       1.2   1.4e+03     260     334 ..     733     813 ..     730     851 .. 0.57
   4 !   23.3   1.7   2.4e-08   2.9e-05      15     134 ..     919    1036 ..     909    1042 .. 0.89
   5 ?    3.2   0.2     0.029        35     240     324 ..    1736    1813 ..    1724    1860 .. 0.61

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 2.4
    RICTOR_N 241 plksLvsaLripslevrkaildllfdllrikppewsesflagrrlttr 288
                  +++L+ aL+ + +++r++++ ++  l+  +p ++  s   +r++ ++
  EPX72448.1 564 NIRCLFIALNDEVFSIREIAIVIIGRLALYNPAHVMPS---LRKTIIQ 608
                 57778888888888888888877777777777777766...4444442 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.41
    RICTOR_N  24 eellkriqfmLldes.kevraagyRilRyli 53 
                 +++++ i f L d+s +  r+a++++lR l+
  EPX72448.1 687 SSFMNLILFSLQDQSsTLKRLASLKCLRQLC 717
                 789**********997889*********986 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 1.2
    RICTOR_N 260 ildllfdllrikppewsesflagrrltt..........ransksqkkqeeneaeesaelkkkeserkrenlvdhylallllvlie 334
                 +l++l+++l+ ++p+  ++   +r l++          +  ++++ k +++++++++    ++ ++++ + +++y  + ++ l++
  EPX72448.1 733 LLNILIEILQSEQPTPIKR-EVLRTLGVlgaldpytylA-TEQCSDKLQKSQSTHQSF--FSHLPSSQYDSLENYAMVAVVTLVQ 813
                 6777777777777766666.3444455566665543321.333333333333222222..2222333555666666555555554 PP

  == domain 4  score: 23.3 bits;  conditional E-value: 2.4e-08
    RICTOR_N   15 pelkydlsleellkriqfmLldeskevraagyRilRylisdseslklllklkldiliirSLekdsksevEReqALkLirafleikkgakelsksvvr 111 
                   e ++++ l ++l+++ + ++++ ++ r ++y+il  ++   ++++  ++l l  +iirS+e+d      R  ALk i ++l++ + + +    +++
  EPX72448.1  919 LEDEFKFYLPQILSHMLKSFSSDTSSTRVISYKILQSFVIFGSNIEEYMHLVLP-VIIRSFERDTVPLQFRKSALKCISQLLHLVNFS-DHASRIIH 1013
                  5566777899*****************************************666.678**************************7776.5666799* PP

    RICTOR_N  112 alvavaehedDrlrricletLaE 134 
                   lv    +++ +l+++ + tL+ 
  EPX72448.1 1014 PLVRMLTKSNSELKMVIMDTLCS 1036
                  **********************6 PP

  == domain 5  score: 3.2 bits;  conditional E-value: 0.029
    RICTOR_N  240 rplksLvsaLripslevrkaildllfdllrikppewsesflagrrlttransksqkkqeeneaeesaelkkkeserkrenlvdhy 324 
                  + + +L+  ++++s++vr+ + +ll d+ r+ p     s      lt++ +++++ +q+++ ++   + + ++    r+ l+  +
  EPX72448.1 1736 EVIPQLIARIHTSSTSVRSSVHQLLSDIGRVHPQALVYS------LTVS-SKSTNIQQKHSAKSIMDNMLSHSDTLVRQALLVSH 1813
                  578899****************************99999......5553.11111111222221111222222222344444333 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.0   0.00014      0.17       4      54 ..     144     194 ..     142     194 .. 0.94
   2 ?   -2.8   0.0       8.3   9.9e+03       9      34 ..     316     341 ..     311     348 .. 0.73
   3 ?    3.7   0.1     0.079        95      37      51 ..     488     502 ..     481     506 .. 0.87
   4 ?    0.1   0.1         1   1.2e+03      19      51 ..     517     550 ..     501     551 .. 0.71
   5 ?    5.0   0.0     0.031        37      14      55 .]     632     673 ..     619     673 .. 0.84
   6 ?    3.3   0.0       0.1   1.2e+02       8      55 .]     667     716 ..     664     716 .. 0.82
   7 ?   -3.0   0.1       9.4   1.1e+04      25      39 ..     845     859 ..     844     865 .. 0.76
   8 ?   -1.4   0.0       3.1   3.7e+03      25      46 ..     926     947 ..     926     949 .. 0.90
   9 ?   -0.5   0.0       1.6     2e+03      20      55 .]     965     998 ..     959     998 .. 0.80
  10 ?    0.2   0.0      0.95   1.1e+03      23      44 ..    1005    1026 ..     986    1028 .. 0.77
  11 ?   -1.8   0.8       4.1   4.9e+03      46      55 .]    1364    1373 ..    1360    1373 .. 0.69
  12 ?   -2.7   0.0       7.7   9.2e+03      28      46 ..    1736    1754 ..    1736    1756 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00014
     HEAT_EZ   4 RraAawaLGrlaggepellqplvpeilpaLlalLnddsdeVRaaAagaLgn 54 
                 R a ++ L +la++ p l+ ++++ei   L  +L+d+++++R++Aa aLg+
  EPX72448.1 144 RMASVLILKSLAQNSPTLVYLYISEIFQNLWITLRDPKPSIRETAADALGA 194
                 6788999999***************************************95 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 8.3
     HEAT_EZ   9 waLGrlaggepellqplvpeilpaLl 34 
                  a+Gr+a   +e++ p+++ il    
  EPX72448.1 316 EAIGRIAMAVKEAMIPYLQSILLVIR 341
                 58999555588999999999887766 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.079
     HEAT_EZ  37 LnddsdeVRaaAaga 51 
                 L +d++eVR aAa++
  EPX72448.1 488 LDNDNPEVRIAAART 502
                 679999*******98 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 1
     HEAT_EZ  19 pellqplvpeilpaLlalL.nddsdeVRaaAaga 51 
                  +l    v e+l  Ll l   d+++++R++++  
  EPX72448.1 517 TPLAIESVAEVLEKLLTLGiADSDPRIRETVLSL 550
                 5555566788888888777699999****99765 PP

  == domain 5  score: 5.0 bits;  conditional E-value: 0.031
     HEAT_EZ  14 laggepellqplvpeilpaLlalLnddsdeVRaaAagaLgnl 55 
                 l + ++ l++p+++ i+   l+  +d+s+ V  a + aLg l
  EPX72448.1 632 LVSKARMLIKPYIESIMHVILPKASDPSPGVSSAIISALGEL 673
                 56678889**************************99999976 PP

  == domain 6  score: 3.3 bits;  conditional E-value: 0.1
     HEAT_EZ   8 awaLGrlaggepel.lqplvpeilpaLlalLnddsdeV.RaaAagaLgnl 55 
                 ++aLG+la++e+++  +++ +  + + l  L+d s++  R a++ +L++l
  EPX72448.1 667 ISALGELASVEGDDiPADVRSSFMNLILFSLQDQSSTLkRLASLKCLRQL 716
                 68****666666662666**************9999999*******9997 PP

  == domain 7  score: -3.0 bits;  conditional E-value: 9.4
     HEAT_EZ  25 lvpeilpaLlalLnd 39 
                 ++p+++p +l+ +++
  EPX72448.1 845 FLPQLVPTFLQVMTS 859
                 689999999987776 PP

  == domain 8  score: -1.4 bits;  conditional E-value: 3.1
     HEAT_EZ  25 lvpeilpaLlalLnddsdeVRa 46 
                 ++p+il  +l+  ++d +++R 
  EPX72448.1 926 YLPQILSHMLKSFSSDTSSTRV 947
                 689*************999986 PP

  == domain 9  score: -0.5 bits;  conditional E-value: 1.6
     HEAT_EZ  20 ellqplvpeilpaLlalLnddsd..eV.RaaAagaLgnl 55 
                 e++++++p+i++ +       +   +  R+ A+ ++++l
  EPX72448.1 965 EYMHLVLPVIIRSFE-----RDTvpLQfRKSALKCISQL 998
                 789999******999.....5555255999999999986 PP

  == domain 10  score: 0.2 bits;  conditional E-value: 0.95
     HEAT_EZ   23 qplvpeilpaLlalLnddsdeV 44  
                  +++ ++i+ +L+++L+ +++e 
  EPX72448.1 1005 SDHASRIIHPLVRMLTKSNSEL 1026
                  567889*********9999876 PP

  == domain 11  score: -1.8 bits;  conditional E-value: 4.1
     HEAT_EZ   46 aaAagaLgnl 55  
                  aaAa+ Lg++
  EPX72448.1 1364 AAAAWGLGQW 1373
                  6777777776 PP

  == domain 12  score: -2.7 bits;  conditional E-value: 7.7
     HEAT_EZ   28 eilpaLlalLnddsdeVRa 46  
                  e++p+L+a+  ++s +VR 
  EPX72448.1 1736 EVIPQLIARIHTSSTSVRS 1754
                  689*****99888889885 PP

>> Cohesin_HEAT  HEAT repeat associated with sister chromatid cohesion
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0     0.044        53      27      38 ..     177     188 ..     165     192 .. 0.88
   2 ?    5.9   0.1     0.014        16      27      42 .]     536     551 ..     530     551 .. 0.91
   3 ?    1.3   0.0      0.36   4.3e+02      18      41 ..     646     669 ..     642     670 .. 0.84
   4 ?   -0.1   0.0      0.99   1.2e+03      18      38 ..    1736    1756 ..    1731    1760 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.044
                   HHSS-HHHHHHH CS
  Cohesin_HEAT  27 ltDsspsVRdAa 38 
                   l+D++ps+R++a
    EPX72448.1 177 LRDPKPSIRETA 188
                   89********98 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.014
                   HHSS-HHHHHHHHHHH CS
  Cohesin_HEAT  27 ltDsspsVRdAaLell 42 
                     Ds+p +R+++L+ll
    EPX72448.1 536 IADSDPRIRETVLSLL 551
                   57************98 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.36
                   HHHHHHHHHHHSS-HHHHHHHHHH CS
  Cohesin_HEAT  18 evldtiarrltDsspsVRdAaLel 41 
                   +++++i  +++D+sp V  A+++ 
    EPX72448.1 646 SIMHVILPKASDPSPGVSSAIISA 669
                   688899999********8888876 PP

  == domain 4  score: -0.1 bits;  conditional E-value: 0.99
                    HHHHHHHHHHHSS-HHHHHHH CS
  Cohesin_HEAT   18 evldtiarrltDsspsVRdAa 38  
                    ev+ ++++r   ss+sVR ++
    EPX72448.1 1736 EVIPQLIARIHTSSTSVRSSV 1756
                    578899999999******987 PP

>> Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.038        46      38      88 ..     138     188 ..     114     197 .. 0.83
   2 ?   -0.6   0.0       1.7     2e+03      46      74 ..     313     341 ..     288     356 .. 0.67
   3 ?    0.9   0.0      0.58   6.9e+02      31      91 ..     483     551 ..     474     556 .. 0.65
   4 ?   -1.7   0.0       3.9   4.7e+03      21      43 ..     640     662 ..     630     706 .. 0.74
   5 ?    5.7   0.0     0.019        23      11      46 ..     913     948 ..     908     981 .. 0.85
   6 ?   -1.1   0.1       2.5   2.9e+03      21      68 ..    1004    1051 ..     990    1061 .. 0.75

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.038
  Vac14_Fab1_bd  38 DkdsrvRyyacEslyniakvakgevlkllneifdalvklvaDsdesvksga 88 
                    D++++ R  ++  l  +a+ + + v  +++eif+ l+  + D ++s++++a
     EPX72448.1 138 DRQEQKRMASVLILKSLAQNSPTLVYLYISEIFQNLWITLRDPKPSIRETA 188
                    666777777777788889999999999*********************865 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 1.7
  Vac14_Fab1_bd  46 yacEslyniakvakgevlkllneifdalv 74 
                     a E++  ia ++k++++ +l++i+ ++ 
     EPX72448.1 313 LAFEAIGRIAMAVKEAMIPYLQSILLVIR 341
                    57777788888888888888888765544 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.58
  Vac14_Fab1_bd  31 pvlkcfsDkdsrvRyya...cEslyn...iakvakgevlkllneifdalvkl.vaDsdesvksga.ell 91 
                    +vl++++ ++ +vR  a   c  ++    +++++   +++ + e+++ l  l +aDsd+ +++++ +ll
     EPX72448.1 483 SVLSYLDNDNPEVRIAAartCCQVFArdpVCRKTTPLAIESVAEVLEKLLTLgIADSDPRIRETVlSLL 551
                    6788888888888887633344455422244555555667777777776666679***99998752455 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 3.9
  Vac14_Fab1_bd  21 ikeyleeivkpvlkcfsDkdsrv 43 
                    ik+y+e+i++++l   sD +  v
     EPX72448.1 640 IKPYIESIMHVILPKASDPSPGV 662
                    77888888888888888876555 PP

  == domain 5  score: 5.7 bits;  conditional E-value: 0.019
  Vac14_Fab1_bd  11 aavaialekkikeyleeivkpvlkcfsDkdsrvRyy 46 
                     ++a+ale + k yl +i++ +lk+fs + s +R  
     EPX72448.1 913 DSIAVALEDEFKFYLPQILSHMLKSFSSDTSSTRVI 948
                    589***********************9887777755 PP

  == domain 6  score: -1.1 bits;  conditional E-value: 2.5
  Vac14_Fab1_bd   21 ikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllne 68  
                      +++ ++i++p++++++ ++s+++   +++l  ++ ++  +   ++  
     EPX72448.1 1004 FSDHASRIIHPLVRMLTKSNSELKMVIMDTLCSVVSQLGYDYAVFIPM 1051
                     56788999*********9999999999999988887776665555555 PP

>> DUF3437  Domain of unknown function (DUF3437)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0    0.0031       3.7       3      52 ..     143     193 ..     141     194 .. 0.94
   2 ?   -0.2   0.0      0.78   9.3e+02       3      51 ..     705     757 ..     703     759 .. 0.74
   3 ?   -2.6   0.0       4.6   5.5e+03      25      53 ..     926     955 ..     914     957 .. 0.56
   4 ?   -2.4   0.0       3.9   4.7e+03      10      38 ..    1033    1061 ..    1028    1073 .. 0.84
   5 ?    0.7   0.0      0.42     5e+02      22      58 ..    1729    1767 ..    1718    1772 .. 0.75

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0031
     DUF3437   3 erhaavlglsAlvlafpydvPkwlpevleeLaraardpa.pirktvkktls 52 
                 +r a+vl l +l +  p  v  ++ e++++L    rdp+ +ir+t+ ++l+
  EPX72448.1 143 KRMASVLILKSLAQNSPTLVYLYISEIFQNLWITLRDPKpSIRETAADALG 193
                 6899***********************************77*****99875 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.78
     DUF3437   3 erhaavlglsAlvlafpydvPkwl..pevleeLar..aardpapirktvkktl 51 
                 +r+a++ +l  l  a  y + +++  p +l  L +  ++++p+pi+++v +tl
  EPX72448.1 705 KRLASLKCLRQLCGASGYVIEPYMdyPYLLNILIEilQSEQPTPIKREVLRTL 757
                 66777778888888999999877765778888888544445558*****9998 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 4.6
     DUF3437  25 wlpevlee.Laraardpapirktvkktlse 53 
                 +lp++l++ L ++++d ++ r    k+l++
  EPX72448.1 926 YLPQILSHmLKSFSSDTSSTRVISYKILQS 955
                 677777773344555544444444455555 PP

  == domain 4  score: -2.4 bits;  conditional E-value: 3.9
     DUF3437   10 glsAlvlafpydvPkwlpevleeLaraar 38  
                   l+++v+   yd   ++p v   L++++ 
  EPX72448.1 1033 TLCSVVSQLGYDYAVFIPMVNKVLVHHKI 1061
                  599***********999999998888765 PP

  == domain 5  score: 0.7 bits;  conditional E-value: 0.42
     DUF3437   22 vP..kwlpevleeLaraardpapirktvkktlseFkrth 58  
                  vP  +wl  + + +ar  ++++++r++v + ls+  r h
  EPX72448.1 1729 VPmdTWLEVIPQLIARIHTSSTSVRSSVHQLLSDIGRVH 1767
                  45546776666667777777778**********999998 PP

>> MOR2-PAG1_C  Cell morphogenesis C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1      0.59     7e+02     148     213 ..     228     288 ..     199     309 .. 0.79
   2 ?   -3.4   0.1       5.9     7e+03     172     212 ..     598     638 ..     595     648 .. 0.84
   3 !   16.1   1.1   6.5e-06    0.0078      98     215 ..     922    1046 ..     893    1059 .. 0.69

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.59
  MOR2-PAG1_C 148 syakgrfrtkddflkqvvkalreayfpehesealvlllgllengpewlrrktlqiLkvllqeidlr 213
                  +y +g+  + ++++++  + +re+y++  +     l+l+l e +   +rr++l +L  l ++ + +
   EPX72448.1 228 EYLHGSLLAYKELFEKSGSFIREHYVAFCD-----LVLRLREHRDGTIRRSILLLLPTLAEYNPSK 288
                  566666667777788888888888876555.....59999****************9998776655 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 5.9
  MOR2-PAG1_C 172 yfpehesealvlllgllengpewlrrktlqiLkvllqeidl 212
                   +p + ++++ ll  l   g++  ++++ q+Lk+l++++ +
   EPX72448.1 598 VMPSLRKTIIQLLSDLEYSGNSRQKEESAQLLKLLVSKARM 638
                  56778888899999999999999999999****99998877 PP

  == domain 3  score: 16.1 bits;  conditional E-value: 6.5e-06
  MOR2-PAG1_C   98 rllllilalLPrllqaleeke.....edqkvlevAenlaalaeekglenLarvltsyakgrfr..tkddflkqvvkalreayfpehesealvlllg 186 
                    + + +   L ++l+++ +++     ++ k+l++   + +  ee  +  L  +++s+ + ++    +++ lk++++ l+   f++h+s+++  l++
   EPX72448.1  922 EFKFYLPQILSHMLKSFSSDTsstrvISYKILQSFVIFGSNIEEYMHLVLPVIIRSFERDTVPlqFRKSALKCISQLLHLVNFSDHASRIIHPLVR 1017
                   5555555666666666655533444444444444444444444555667778888898888766578999************************** PP

  MOR2-PAG1_C  187 llengpewlrrktlqiLkvllqeidlrkp 215 
                   +l++++++l+  +++ L+++++++  + +
   EPX72448.1 1018 MLTKSNSELKMVIMDTLCSVVSQLGYDYA 1046
                   *********************99877755 PP

>> Sec7_N  Guanine nucleotide exchange factor in Golgi transport N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0     0.045        53      74     147 ..      94     166 ..      80     167 .. 0.75
   2 ?   -2.7   0.2       4.1   4.8e+03      27      73 ..     217     263 ..     199     282 .. 0.77
   3 ?   -0.8   0.3       1.1   1.3e+03      22      80 ..     356     429 ..     332     435 .. 0.71
   4 ?   12.1   0.0   0.00011      0.14      64     149 ..     646     730 ..     623     732 .. 0.83
   5 ?    2.6   6.6     0.094   1.1e+02      50     135 ..     868     956 ..     783    1000 .. 0.91
   6 ?   -1.7   0.1       1.9   2.3e+03     111     129 ..    1015    1031 ..     962    1066 .. 0.54
   7 ?   -2.5   0.0       3.6   4.2e+03     115     143 ..    1776    1805 ..    1712    1806 .. 0.69
   8 ?   -2.5   0.0       3.6   4.3e+03      56     108 ..    2169    2221 ..    2157    2230 .. 0.81

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.045
      Sec7_N  74 sespsfpvferslrivllLlkkfrseLktE.ievflsllilillesdsslwqrvlaLeilrrlcsdpqllvelyl 147
                  +s++f+++e+s++++ +L       L  E +e  ++  +  l + d + ++r+  + il++l +++ +lv+ly 
  EPX72448.1  94 LPSTDFRTMELSAKVLGQLAAL-GGTLAAElVEFEVQRAFEWL-QGDRQEQKRMASVLILKSLAQNSPTLVYLYI 166
                 2888999999999999998764.55555551455555556666.99999************************96 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 4.1
      Sec7_N  27 slaersktfsLeLlesvlsnhgdvfrkhpellqllkqklcplLlknl 73 
                 +++   ++ s e l+  l  ++++f+k+ +++       c+l+l++ 
  EPX72448.1 217 QAEFGLRQSSVEYLHGSLLAYKELFEKSGSFIREHYVAFCDLVLRLR 263
                 55566677888888888999999999999999888888888888875 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 1.1
      Sec7_N  22 kpkflslaersktfsLeLlesvlsnhgdvfr................khpellqllkqklcplLlknlsespsfp 80 
                 kp f  + ++   + LeLle   s  g +f+                + p ll+ ++++l+++++++l + ++f+
  EPX72448.1 356 KPVFECIGMLAAAVKLELLEDSRSLLGLIFScelsihlrqalvkmaeNIPPLLAPVQERLLNMVSQIL-TGKNFE 429
                 36656778888888999999999999999977777777777777777778888888888888888888.666665 PP

  == domain 4  score: 12.1 bits;  conditional E-value: 0.00011
      Sec7_N  64 klcplLlknlsespsfpvferslrivllLlkkfrseLktEievflsllilillesdsslwqrvlaLeilrrlcsdpqllvelylnY 149
                  +++++l  + + ps+ v++ +++ +  L +   + +  ++   ++ lil+ l+ +ss  +r   L++lr+lc+ +  ++e y+ Y
  EPX72448.1 646 SIMHVILPKA-SDPSPGVSSAIISALGELASVEGDDIPADVRSSFMNLILFSLQDQSSTLKRLASLKCLRQLCGASGYVIEPYMDY 730
                 4566666666.67788888888888888888888888888888888888888899****************************998 PP

  == domain 5  score: 2.6 bits;  conditional E-value: 0.094
      Sec7_N  50 vfrkhpellqllkqklcplLlknlsespsfp.vferslrivllLlkkfrseLktEievflsllililles..dsslwqrvlaLeilrrl 135
                  f++ ++l++++  k+ + ++ +++ s++f  +++ +l ++  L+ +    L++E + +l  ++ ++l+s  + ++  rv+  +il+++
  EPX72448.1 868 YFQQLTTLTSIVGPKIKDYISEIFNLSKTFWdTSTSLLLVIIDLIDSIAVALEDEFKFYLPQILSHMLKSfsSDTSSTRVISYKILQSF 956
                 6889999999999999999999999888886145556677888*************************998777789999999999876 PP

  == domain 6  score: -1.7 bits;  conditional E-value: 1.9
      Sec7_N  111 lilillesdsslwqrvlaL 129 
                  l+++l+  +s+++ +++++
  EPX72448.1 1015 LVRMLT--KSNSELKMVIM 1031
                  222221..22223333333 PP

  == domain 7  score: -2.5 bits;  conditional E-value: 3.6
      Sec7_N  115 lles.dsslwqrvlaLeilrrlcsdpqllv 143 
                  +++s +++++q++ a  i+ +++s++ +lv
  EPX72448.1 1776 TVSSkSTNIQQKHSAKSIMDNMLSHSDTLV 1805
                  223335556888888888888888887776 PP

  == domain 8  score: -2.5 bits;  conditional E-value: 3.6
      Sec7_N   56 ellqllkqklcplLlknlsespsfpvferslrivllLlkkfrseLktEievfl 108 
                  ++ + +  +l ++L+  ++ s    +++++++ v+ +l++  ++L   +e+f+
  EPX72448.1 2169 KFPEHIPFRLTRMLINAMEVSGIQGTYTITCEHVMRVLRSNTESLMAVLEAFV 2221
                  55556666788899999988889999999999999999999999988888875 PP

>> FANCI_S2  FANCI solenoid 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.1      0.17     2e+02      63     111 ..     340     388 ..     308     413 .. 0.74
   2 ?    6.5   0.0    0.0081       9.7      44     132 ..     587     676 ..     573     680 .. 0.85
   3 ?   -2.8   0.3       5.8     7e+03     100     126 ..     824     850 ..     786     906 .. 0.55
   4 ?   -1.8   0.3       2.7   3.3e+03      38      88 ..     984    1036 ..     931    1060 .. 0.61
   5 ?    4.4   0.0     0.036        43      58      97 ..    1732    1771 ..    1710    1783 .. 0.83

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.17
    FANCI_S2  63 iieqllsriitkseeevsqyiklLselvksapltllesssk.lkelldyl 111
                 i + l+ ++  k ++  ++++++++ l+++ +l+lle s + l  ++ + 
  EPX72448.1 340 IRDTLTTKVRDKHQQ-EKPVFECIGMLAAAVKLELLEDSRSlLGLIFSCE 388
                 445555666666555.599***************9999888455555554 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0081
    FANCI_S2  44 lgsqiLlelfkvhesarseiieqllsriitkseeevsqyiklLselvksapltllesssk.lkelldylsflpletatallkAllPLlkv 132
                 +g+  L +  +v  s r++ii+ l +   + ++ + ++ ++lL+ lv +a + ++ ++++ +  +l   s  ++ +++a+++Al  L  v
  EPX72448.1 587 IGRLALYNPAHVMPSLRKTIIQLLSDLEYSGNSRQKEESAQLLKLLVSKARMLIKPYIESiMHVILPKASDPSPGVSSAIISALGELASV 676
                 5666667777889999*******9998888888888999*********************777889999999999999999999888776 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 5.8
    FANCI_S2 100 sssklkelldylsflpletatallkAl 126
                 ++s ++ ++  +s l+ + +  l + +
  EPX72448.1 824 HTSVVQAVMHICSQLKFKSVAFLPQLV 850
                 444444444444444333333332222 PP

  == domain 4  score: -1.8 bits;  conditional E-value: 2.7
    FANCI_S2   38 aqaaaklgsqiLlelfkv..hesarseiieqllsriitkseeevsqyiklLse 88  
                    + +k + + +++l +   +++  s ii  l+  ++++++e  + +++ L +
  EPX72448.1  984 PLQFRKSALKCISQLLHLvnFSDHASRIIHPLVRMLTKSNSELKMVIMDTLCS 1036
                  33444444444444443322444455555555555555555555555555555 PP

  == domain 5  score: 4.4 bits;  conditional E-value: 0.036
    FANCI_S2   58 sarseiieqllsriitkseeevsqyiklLselvksapltl 97  
                  ++  e+i ql+ ri t+s++  s + +lLs++ + +p  l
  EPX72448.1 1732 DTWLEVIPQLIARIHTSSTSVRSSVHQLLSDIGRVHPQAL 1771
                  55669***************************99999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2333 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       643  (0.0358637); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 1.12u 0.28s 00:00:01.40 Elapsed: 00:00:00.45
# Mc/sec: 15644.50
//
Query:       EPX72449.1  [L=647]
Description: pig-Q [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.7e-65  220.6  16.5    1.7e-65  220.6  16.5    1.7  2  Gpi1           N-acetylglucosaminyl transferase component (Gp
  ------ inclusion threshold ------
        0.3   11.1   0.9       0.94    9.5   0.9    1.8  1  DUF3043        Protein of unknown function (DUF3043)
          9    6.0  14.1        1.1    9.0   4.4    2.8  3  FA_desaturase  Fatty acid desaturase


Domain annotation for each model (and alignments):
>> Gpi1  N-acetylglucosaminyl transferase component (Gpi1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.5   1.0         3   1.8e+04     149     181 ..     212     244 ..     204     246 .. 0.72
   2 !  220.6  16.5   2.9e-69   1.7e-65       1     187 []     315     501 ..     315     501 .. 1.00

  Alignments for each domain:
  == domain 1  score: -4.5 bits;  conditional E-value: 3
        Gpi1 149 rGkkyNvLrnrvDsldyeldqlllGtllFtvlv 181
                   +k N+L +    +   + +ll  ++lF++++
  EPX72449.1 212 PNRKNNILIQSSKRYFLFFLNLLHPIVLFFLIF 244
                 568888888888888888888888888877654 PP

  == domain 2  score: 220.6 bits;  conditional E-value: 2.9e-69
        Gpi1   1 fnslwlilnDvllGilllslllenaeviaelieklleellvdslekllewlsgnPaGlKLNkeLasflgklflwviklwksllesllsllelllkllal 99 
                 +n+lwl++nD+++Gi+++s++len   +++l++k+l ++ +++++ +++wl ++PaGlKLN+++ +f+ kl +w+i++w ++l s++++++ +++++a+
  EPX72449.1 315 YNNLWLVANDIIFGITMCSFILENLPLVVNLLDKVLFKFAIKDVRVMVTWLIDTPAGLKLNNDICKFIVKLSVWIIDVWYTVLLSFRQYIPWFVRTIAF 413
                 79************************************************************************************************* PP

        Gpi1 100 lsllGltfalsllsDllslltlhiylfyvlsariyrlqlevlksLfqlfrGkkyNvLrnrvDsldyeldqlllGtllFtvlvfLlPTv 187
                 ++++G++++++l+sD+l+++t+h+y++y++sa +y++ql+++ sL+qlfrGkk+NvLrnr+Ds++y+ldqlllGt+lFtvl+f+lPT+
  EPX72449.1 414 SGFCGASLMIALMSDFLTIMTIHLYVLYLASACLYNWQLRIIYSLLQLFRGKKRNVLRNRIDSYEYDLDQLLLGTILFTVLIFFLPTI 501
                 ***************************************************************************************8 PP

>> DUF3043  Protein of unknown function (DUF3043)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.9   0.00016      0.94      61     124 ..     463     526 ..     456     531 .. 0.61

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00016
     DUF3043  61 rgpvRryvRDlVDsrrn.lgelflplalvvlvlllvslvkvpevqavvsllllvllllvvidgil 124
                 rg++R   R+ +Ds  + l +l+l ++l+ ++++++ ++ v  ++ ++ + ++v+  l+++++il
  EPX72449.1 463 RGKKRNVLRNRIDSYEYdLDQLLLGTILFTVLIFFLPTIYVFYLA-FAVTRITVMTCLAIFETIL 526
                 99************7551666666666666666555333333332.2333444555666666654 PP

>> FA_desaturase  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.1     0.016        93      77     157 ..     174     247 ..     158     261 .. 0.62
   2 ?   -1.7   2.2      0.36   2.1e+03     134     164 ..     400     440 ..     359     458 .. 0.62
   3 ?    9.0   4.4   0.00019       1.1     107     187 ..     444     533 ..     428     552 .. 0.62

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.016
  FA_desaturase  77 eDpdlaplalsrfeglfryllrlllgllvlgwllalvlglwlrrlarrrapsksrrrkwrllawlllllawlglwlallll 157
                     D +++    ++  +++r l+  l  ll+ ++  + + +++ ++++++   ++s++r+  + + ll+ +  ++++l +l +
     EPX72449.1 174 LDLHFP---RRPENTWNRSLRSDLVELLNQSF--EVHVFMRQYPNRKNNILIQSSKRYFLFFLNLLHPI--VLFFLIFLRV 247
                    444444...26666666667777777777773..33444477777777777777777544444444444..7777776654 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.36
  FA_desaturase 134 kwrllawlllllawlglwlalllllglall..........l 164
                    +++++ w++  +a+ g+ +a l  + ++ +          l
     EPX72449.1 400 FRQYIPWFVRTIAFSGFCGASLMIALMSDFltimtihlyvL 440
                    36777777777777666666666555544344344332222 PP

  == domain 3  score: 9.0 bits;  conditional E-value: 0.00019
  FA_desaturase 107 g...wllalvlglwlrrlarrrapsksrrrk........wrllawlllllawlglwlalllllglalllwlvplllllfllalvlnyveHyg 187
                    +   ++++l +++ l +l+r ++++  r r         + ll+  l+   +l+++l++++++ la+++  + ++++l+++ ++l +++H+ 
     EPX72449.1 444 SaclYNWQLRIIYSLLQLFRGKKRNVLRNRIdsyeydldQLLLGTILFT--VLIFFLPTIYVFYLAFAVTRITVMTCLAIFETILAFLNHFP 533
                    2333455555555555555555555544444455555634444444444..48888888888888877888888888888888889999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (647 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       904  (0.0504211); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 4709.65
//
Query:       EPX72450.1  [L=92]
Description: ribosomal protein subunit S27 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-19   70.4   0.3    1.2e-19   70.3   0.3    1.0  1  MRP-S33   Mitochondrial ribosomal subunit S27


Domain annotation for each model (and alignments):
>> MRP-S33  Mitochondrial ribosomal subunit S27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.3   0.3   6.9e-24   1.2e-19       3      88 .]       7      89 ..       5      89 .. 0.95

  Alignments for each domain:
  == domain 1  score: 70.3 bits;  conditional E-value: 6.9e-24
     MRP-S33  3 llelaklsarIFgevynptnlrtgsKvlrkrlkgplladYYpprivsfkqlkkllrellkfrDeaeefrlemvalrkrRGKgapkK 88
                l+e++++sa+IF+++y+ +n+rtg+K+l+++l+gp la+YY p  v f+ ++++    l +++ ++  r+e+ +++ r+GKg++k+
  EPX72450.1  7 LEEIKQVSANIFQTNYKSNNSRTGNKFLQRKLQGPRLASYY-PTKVPFSRMREITG--LPIPNSEHSLRMEILEEKTRKGKGPVKR 89
                899**************************************.********988884..8************************995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       498  (0.0277762); expected 358.6 (0.02)
Passed bias filter:                      407  (0.0227007); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.22s 00:00:00.55 Elapsed: 00:00:00.34
# Mc/sec: 803.99
//
Query:       EPX72451.1  [L=367]
Description: pyruvate dehydrogenase e1 component beta subunit Pdb1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-47  161.6   0.0    3.1e-46  157.3   0.0    2.1  2  Transket_pyr     Transketolase, pyrimidine binding domain
    1.4e-36  125.1   0.2    2.9e-36  124.1   0.2    1.6  1  Transketolase_C  Transketolase, C-terminal domain
    6.5e-05   23.2   0.0    0.00016   21.9   0.0    1.7  1  PFOR_II          Pyruvate:ferredoxin oxidoreductase core doma


Domain annotation for each model (and alignments):
>> Transket_pyr  Transketolase, pyrimidine binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.3   0.0   5.1e-50   3.1e-46       2     176 ..      37     212 ..      36     214 .. 0.98
   2 ?    2.2   0.0     0.021   1.2e+02      12      55 ..     284     328 ..     276     341 .. 0.89

  Alignments for each domain:
  == domain 1  score: 157.3 bits;  conditional E-value: 5.1e-50
                   EEEHHHHHHHHHHHHHCTTTTEEEEESSTH..HHHTTCHCCHHEGGTTEGEEE--S-HHHHHHHHHHHHHHCTTEEEEEEEEHHHHGGG..HHGGHH CS
  Transket_pyr   2 kiawrkaeaealaellkedpevvligaDva..ggtfsvrkgllhdqgegrvidsgisEqavlgfavGaalagpllviveaqFgdFangA..qiyadq 94 
                   ++++r+a++ a++e++++d++v+l+g++v+  +g ++v  gll+++g++rvid++i+E +++g a Gaa+ag l++i+e++ ++F+++A  +i++++
    EPX72451.1  37 EMTVRDALNSAMEEEMRRDERVFLMGEEVGqyNGAYKVSRGLLDKFGPKRVIDTPITEMGFTGLATGAAFAG-LRPICEFMTFNFSMQAidHIVNSA 132
                   789***************************999***************************************.9*********************** PP

                   HHHCHHHHHT--EEEEESBSGGGSTTGTTTSBSSHHHHHHTSTTEEEE--SSHHHHHHHHHHHHHSSS.SEEEEEE-SSEEC CS
  Transket_pyr  95 airsgeakgklkvgvvtrlpigvgedGpehqsaeleaflrlipglkvvrPsdpaetkhllrrairredrkPvvlrlpksllr 176
                   a ++++++gk+ +++v+r p g     ++++s+    ++ +ipglkv+ P+++++++++l++air  d++Pvv+++++ l+ 
    EPX72451.1 133 ARTNYMSGGKQACPIVFRGPNGPAAAVAAQHSQHFGPWYGSIPGLKVISPYSAEDARGMLKAAIR--DPNPVVVLENELLYG 212
                   *****************************************************************..99********99986 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.021
                   HHHHHHCTTTTEEEEESSTH.HHHTTCHCCHHEGGTTEGEEE--S CS
  Transket_pyr  12 alaellkedpevvligaDva.ggtfsvrkgllhdqgegrvidsgi 55 
                    + e +k+ ++vv ++++ + +g +s++ ++l +++++ ++ds++
    EPX72451.1 284 IIVESAKKTNRVVTVDQAYSqHGLGSEIAAQLMESSAFDYLDSPV 328
                   56788999**********9889********************998 PP

>> Transketolase_C  Transketolase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.1   0.2   4.9e-40   2.9e-36       3     122 ..     233     353 ..     231     355 .. 0.97

  Alignments for each domain:
  == domain 1  score: 124.1 bits;  conditional E-value: 4.9e-40
                      EEEEETTSSEEEEEETTHHHHHHHHHHHHHTT.TTCEEEEE-SEEESHHHHHHHHHHHHHSEEEEEEEEESTTSHHHHHHHHHHH.CCCTTCSS CS
  Transketolase_C   3 aeilregkdvtlvayGsmveealeAaeeLeke.gisaeVvdlrtvkplDketilesvkktgrlvvveeavkrgGigsevaaalae.eafdglda 94 
                      ++++r+gkd+t+v+ +  v++aleAa+ L+++ g++aeV++lr+++p+D + i es+kkt+r+v+v++a+ + G+gse+aa+l+e  afd+ld 
       EPX72451.1 233 GKVERPGKDITIVGESISVSTALEAADILKEKhGVEAEVINLRSIRPIDMDIIVESAKKTNRVVTVDQAYSQHGLGSEIAAQLMEsSAFDYLDS 326
                      6899**************************999************************************************************* PP

                      EEEEEEE-SSSSSSGHHHHHHHTT-SHH CS
  Transketolase_C  95 pvkrvggpdviepgsaeelekafgldae 122
                      pv+rv++ dv++p+s + +e+a++++a+
       EPX72451.1 327 PVERVTMADVPMPYS-TPIEAATLPNAD 353
                      ***************.88******9986 PP

>> PFOR_II  Pyruvate:ferredoxin oxidoreductase core domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.0   2.7e-08   0.00016       2      81 ..     241     318 ..     240     334 .. 0.88

  Alignments for each domain:
  == domain 1  score: 21.9 bits;  conditional E-value: 2.7e-08
                 SEEEEE-STHHHHHHHHHHHHHHT.T--EEEEEES--BS--HHHHHHHSTT-SEEEEEE-S--TT-G-HHHHHHHHHTGGG CS
     PFOR_II   2 evvivamGsvagtaksavdelRee.gikvGllrlrtlrPFPeeelkellkkvkkvvvldrnisfgseGqlveevkaalkks 81 
                 ++ iv+  ++++ta +a+d l+e+ g+++ ++ lr++rP   + + e +kk+++vv++d+++s   +  l++e++a+l +s
  EPX72451.1 241 DITIVGESISVSTALEAADILKEKhGVEAEVINLRSIRPIDMDIIVESAKKTNRVVTVDQAYS---QHGLGSEIAAQLMES 318
                 67899999999**********98559************************************4...667999999998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (367 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       403  (0.0224776); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2742.88
//
Query:       EPX72452.1  [L=225]
Description: dienelactone hydrolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-18   66.8   0.0    2.1e-18   66.7   0.0    1.0  1  DLH       Dienelactone hydrolase family


Domain annotation for each model (and alignments):
>> DLH  Dienelactone hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.7   0.0   1.2e-22   2.1e-18       4     215 ..       9     222 ..       6     224 .. 0.81

  Alignments for each domain:
  == domain 1  score: 66.7 bits;  conditional E-value: 1.2e-22
         DLH   4 ylatpknakkpvvvviqeifGvndnikdiserlaeeGYvalaPdlYarqa....ldpndeaeaaraldelvskvae.ekvlddlkaavaylksvpevst 97 
                 y+++  +  k+v v i ++fG  ++ik  +++la+ G+ + +Pd++ + a      + d++e +++ +  +++    +    +l+  ++++ks+   ++
  EPX72452.1   9 YAVGCPSN-KKVLVGIMDVFGFSEQIKIGADKLAQSGFTVYLPDFFDGAAlpvnAFSVDTPEMQKIRNDFFTNHLPsHLHYPKLEKVLNAIKSTH-GND 105
                 55554444.689999***********9999********************888733567777777777777766440455678899999999999.677 PP

         DLH  98 kkvgvvGfCmGGalalllaaevpevdaavafYGlspekeleeaakikapilalfg.eeDefipadevekleealkaanvdlelkvYpgagHaFandsre 195
                  ++g  G C+G+++ l +a + + + + +  ++++p+   ++a+++ +p+l+l   +eD  i ++  e++++    a ++  ++ Y +  H+F++++++
  EPX72452.1 106 VQIGTYGLCWGAKILLTYANNSE-FVGIACPHPSFPD--PADAKNVHVPVLFLSSkDEDANIINAWEEEFKKDP--AYKQSSFQTYHDMHHGFMAARAD 199
                 99*******************95.7788888994444..36899*******98873689999998888888877..66778999***********9999 PP

         DLH 196 ...syneeaaedawervlelfkq 215
                    + n +   +++e++  +f+ 
  EPX72452.1 200 lsnDNNRKCFFEGYEKMNTFFQS 222
                 87677777777999999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       401  (0.022366); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.37
# Mc/sec: 1807.35
//
Query:       EPX72453.1  [L=515]
Description: snoRNP assembly factor Naf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.4e-40  138.6   0.8    1.4e-40  138.6   0.8    2.6  3  Gar1       Gar1/Naf1 RNA binding region
  ------ inclusion threshold ------
        9.8    6.2  15.0        7.4    6.6   1.9    3.0  3  Gti1_Pac2  Gti1/Pac2 family


Domain annotation for each model (and alignments):
>> Gar1  Gar1/Naf1 RNA binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.6      0.64   5.7e+03     112     134 ..      62      85 ..      51      96 .. 0.61
   2 ?    0.7   0.6     0.046   4.1e+02      96     139 ..     130     172 ..     120     187 .. 0.67
   3 !  138.6   0.8   1.6e-44   1.4e-40       7     154 .]     235     380 ..     231     380 .. 0.97

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 0.64
                 XXXXXXXXXXXXXXXXXXXXXX.X CS
        Gar1 112 eelkkkkgpdasnendeElpee.e 134
                 +e++k+    asn+  e++++e e
  EPX72453.1  62 NEIEKTDQASASNRTTEDVSSElE 85 
                 556666666777776666655533 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.046
                 EEEEE-X...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        Gar1  96 kvyiapd.lplerfllteelkkkkgpdasnendeElpeeevefsd 139
                  vy++     +e+f+  ++l+  kg+     n+e  +e+e e s 
  EPX72453.1 130 PVYVNDSlGTMENFT--DSLQPSKGNTVEEVNKEAAEEKELEKSV 172
                 567766677788887..7788877777776655555555666664 PP

  == domain 3  score: 138.6 bits;  conditional E-value: 1.6e-44
                 ---TT----TTS-EEEEEEEEEEETTEEEEEE---S--B--BTT-EEEETT--EEEE--EEES-SSS-EEEEE--GGHHHHHHHTTTTSEEEEE-X..X CS
        Gar1   7 vekedieigppeevleiGtvssivenevviksttsgekkvldfnsilflenktqiGkVdEifGpvnepyysVklnsseeikaksfkvgdkvyiapdlpl 105
                  e+++ie+gp+++++++G+v ++ ++e+vi+s+ ++e+ + d+ ++l++e++t +G + E+fGpv++p+y+V+++++ee  + + +vg++v+++p+  +
  EPX72453.1 235 YERPTIELGPDSPIEPLGNVLQVLKKELVIQSDVQNEELIFDEKTVLCFEDRTIVGFIHETFGPVSSPFYVVRFTNEEECASINPSVGKRVFYVPT--M 331
                 67899*******************************************************************************************..* PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        Gar1 106 erfllteelkkkkgpdasnendeElpeeevefsdDekeaeakkkkkgkk 154
                 ++ l+ e+lk  kg+dasn +deE+++ e+efsdDe+ea+ak++k++kk
  EPX72453.1 332 ANRLDPEPLKYIKGSDASNVYDEEINPSEQEFSDDEAEAAAKQSKRKKK 380
                 *********************************************9985 PP

>> Gti1_Pac2  Gti1/Pac2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   1.9   0.00082       7.4      66     146 ..       6      85 ..       5     102 .. 0.52
   2 ?    5.4   1.5     0.002        18      78     138 ..     157     216 ..     132     274 .. 0.58
   3 ?    2.0   0.1     0.021   1.9e+02      83      99 ..     370     386 ..     331     434 .. 0.56

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.00082
                 --EEETTEEEEEB-------------------------------.................-------------------- CS
   Gti1_Pac2  66 pSrilgnfLvYreldkkrakkkkkkkkkkskestkkeesksekasssssesseakessssseskasksskslekdserslv 146
                 p +i g  L+Y e + ++++ +  ++ +++ ++ +k++  ++ +++ +++ s +++s++ +++ ++++s+++++d +++l 
  EPX72453.1   6 PCKIPGLSLIYNEESPNQENATGAATINENLQNPEKSSPPES-SRPVTENVSVTSNSNEIEKTDQASASNRTTEDVSSELE 85 
                 67899999*****97777777766655555444444443333.33333333333333333322233333333333333333 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.002
                 B-------------------------------.................------------ CS
   Gti1_Pac2  78 eldkkrakkkkkkkkkkskestkkeesksekasssssesseakessssseskaskssksle 138
                 e++k+ a++k+ +k+ +s++++++++++s++++s+s++ s ++++ss se  +++++ +le
  EPX72453.1 157 EVNKEAAEEKELEKSVNSQSDSESSDDDSSDSDSDSDSGSGTDSTSSLSEV-HDNEKLELE 216
                 334444333333333333333333333222222222222222333333311.222222222 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.021
                 ----------------- CS
   Gti1_Pac2  83 rakkkkkkkkkkskest 99 
                  a+k++k+kkk++++ t
  EPX72453.1 370 AAAKQSKRKKKRKTKPT 386
                 11111111111111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (515 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1625  (0.0906353); expected 358.6 (0.02)
Passed bias filter:                      573  (0.0319594); expected 358.6 (0.02)
Passed Vit filter:                        76  (0.00423894); expected 17.9 (0.001)
Passed Fwd filter:                        29  (0.00161749); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.88u 0.29s 00:00:01.17 Elapsed: 00:00:00.42
# Mc/sec: 3653.14
//
Query:       EPX72454.1  [L=277]
Description: phrenate dehydratase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-52  177.9   0.0    2.3e-52  177.5   0.0    1.1  1  PDT       Prephenate dehydratase


Domain annotation for each model (and alignments):
>> PDT  Prephenate dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  177.5   0.0   1.3e-56   2.3e-52       1     181 [.       6     181 ..       6     183 .. 0.96

  Alignments for each domain:
  == domain 1  score: 177.5 bits;  conditional E-value: 1.3e-56
                 EEEES-TTSHHHHHHCCCS.....EEEEES-HHHHHHHHCTTS-SEEEEEEEESSS-B-HHHHHHHHH.SSEEEEEEEEEE---EEEE-TT--TTT--E CS
         PDT   1 vaylGpegtyshqAalkvfkaedvelipvasieevfeavekgeadyavvPiENsteGsVnetlDlLlkesdlkivgEvvlpiehcLlakpktkleeikk 99 
                 v++lGp+gt+s+qAal    ++d+   + ++  +v+eav++++++++v+PiENst+GsV+  +DlL  ++d+ + +E+++p++hc++++   ++++ ++
  EPX72454.1   6 VGFLGPKGTFSNQAALLA--KPDCVHTSLPTLAAVVEAVKSHQVNLGVLPIENSTNGSVVPAYDLLKYKKDIIVLDEILVPVHHCIIGH---SIDKANR 99 
                 78**************44..6***********************************************99****************855...5789*** PP

                 EEE-HHHHHHTHHHHHH-.TTSEEEE-S-HHHHHHHHHHCT-TTEEEEE-HHHHHHTT-EEEECS-SS-S--EEEEEEEEET CS
         PDT 100 vyShpqalgQcrkfLeehlpqvervavestaeAakkveassdkdaaaiasevaaelyglkvleeniedkknntTRFlvlake 181
                 ++Shpqa+gQc+k+++++lp+v  v+v+st++Aa+  +++++ +++ai+s+ +a++y+ kvl +++ed++nn+TRF+++a++
  EPX72454.1 100 LLSHPQAFGQCTKWIKNNLPNVISVPVNSTSHAAELASNDQTGSKLAISSQFCADTYNYKVLVKDVEDDPNNCTRFFLIASR 181
                 ************************************99999999***********************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (277 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       396  (0.0220871); expected 358.6 (0.02)
Passed bias filter:                      303  (0.0169); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 2072.11
//
Query:       EPX72455.1  [L=482]
Description: cell wall biosynthesis/cell cycle regulator [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      4e-30  104.9   0.1    1.1e-29  103.5   0.0    1.8  2  SMI1_KNR4       SMI1 / KNR4 family (SUKH-1)
  ------ inclusion threshold ------
       0.14   12.7   0.0       0.85   10.2   0.0    2.1  2  Inhibitor_G39P  Loader and inhibitor of phage G40P


Domain annotation for each model (and alignments):
>> SMI1_KNR4  SMI1 / KNR4 family (SUKH-1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.5   0.0   1.2e-33   1.1e-29       3     132 ..     149     296 ..     147     297 .. 0.83
   2 ?   -2.9   0.5      0.95   8.5e+03      57      70 ..     435     448 ..     398     478 .. 0.63

  Alignments for each domain:
  == domain 1  score: 103.5 bits;  conditional E-value: 1.2e-33
                 -HHHHHHHHHHHTS---HHHHHHHHHHTSEEEEETTSEEETTEEEEEE-THHHHS.......HHHCCCHHHHHHCHHCC..............SST.TE CS
   SMI1_KNR4   3 teedlqefekdlgikLPndyreflkltnGgelfgesnglifglkllsldeieeereesrssseeladdkekkkiprqra..............lph.gw 86 
                 t++d++ +e +l ++LP d+re++ +++G++ +g+  g++fg +ll+++eieee e  r  ++++a+     ki++  a              ++h gw
  EPX72455.1 149 TAADVDSLEYELECTLPRDVRESMYIHDGQDRGGQLTGILFGVTLLDIEEIEEESELWRRVAQSYAEATIAGKIDQAVAsrqssfppgavqcvYAHpGW 247
                 899***********************************************99998777777744433322222222222333558888888885555** PP

                 EEEEEETTCEEEECEEEE..TTTTEEEECC.HHHGG-EEEESSHHHHHH CS
   SMI1_KNR4  87 ipfatdgggnyicidlsp..qgeegqvilf.rdddekfqiadsfgdfll 132
                 ip+a d +gn i++dl+p   g++gqvilf rd+d+k++ia s++dfl+
  EPX72455.1 248 IPLAKDFVGNNIAVDLAPgpAGHWGQVILFgRDQDTKYVIARSWADFLA 296
                 ******************************9999**************8 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.95
                 S.......HHHCCC CS
   SMI1_KNR4  57 reesrssseeladd 70 
                 +ees++ ++e++++
  EPX72455.1 435 KEESSPKINENDKN 448
                 33333333333222 PP

>> Inhibitor_G39P  Loader and inhibitor of phage G40P
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   9.4e-05      0.85      30      67 ..     200     238 ..     193     241 .. 0.86
   2 ?   -0.8   0.0      0.26   2.4e+03      23      41 ..     278     296 ..     276     304 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 9.4e-05
  Inhibitor_G39P  30 kmvvevWadllkdydyklvskalkaliasnkk.fpPsig 67 
                     +   e+W  + ++y   +++ ++   +as+++ fpP + 
      EPX72455.1 200 EEESELWRRVAQSYAEATIAGKIDQAVASRQSsFPPGAV 238
                     555699******************************976 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.26
  Inhibitor_G39P  23 grskkenkmvvevWadllk 41 
                     gr++  + ++   Wad+l+
      EPX72455.1 278 GRDQDTKYVIARSWADFLA 296
                     5666666777889***997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (482 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1363  (0.0760221); expected 358.6 (0.02)
Passed bias filter:                      501  (0.0279436); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.24s 00:00:00.90 Elapsed: 00:00:00.42
# Mc/sec: 3483.33
//
Query:       EPX72456.1  [L=216]
Description: 60S ribosomal protein L10a [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.6e-45  153.3   0.4    8.2e-45  153.0   0.4    1.0  1  Ribosomal_L1  Ribosomal protein L1p/L10e family
  ------ inclusion threshold ------
      0.046   14.2   0.5       0.12   12.8   0.1    1.9  3  DUF2482       Hypothetical protein of unknown function (DUF24


Domain annotation for each model (and alignments):
>> Ribosomal_L1  Ribosomal protein L1p/L10e family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.0   0.4   9.2e-49   8.2e-45       4     203 ..      22     210 ..      17     211 .. 0.96

  Alignments for each domain:
  == domain 1  score: 153.0 bits;  conditional E-value: 9.2e-49
                   HS-SSS--EEEEEEEESSS-TTSGGG--EEEEE-STSTSSCS-EEEEE-HHHHH...HHHHTT..-SEEETCHHHHHHT-HHHHHHTCCH-SEEEEE CS
  Ribosomal_L1   4 hakkkfdesveialnlttkkpkkadqrkpgkipLphplgkevkiclitkdpqaeyakeakeagriakviglkklkkkyksfeakrkllkefdlflad 100
                    +k++f+e+ve+++ l++++p++ d+r++g+i+Lp+  + ++  c++ + ++ +    ak+ g   + +++++lkk  k+++  +kl+k++d f+a+
    EPX72456.1  22 QKKRHFTETVELQIGLKNYDPQR-DKRFSGTIKLPNVPRPNMALCILGDAHDLD---RAKHGG--VDAMSVDDLKKLNKNKKLVKKLAKKYDAFVAS 112
                   45778***************666.99************************9999...99*99*..******************************** PP

                   GGGHHHHHHHCHHHHGGGT-S-ECC..CT.BTS-HHHHHHHHCTTEEEEE-TTTSEEEEEEEETTSSHHHHHHHHHHHHHHHHHTSTTTSGSEEEEE CS
  Ribosomal_L1 101 drimpllpklLGkvfgkrkkmPipvltkgtvkedvkkevekalkstvvvrldkgtclsvkvGklsftaeelaeNieavvkalvekvpkkwkniksiy 197
                   d +++++p+lLG+ ++k++k+P+pv ++   ++d+  ++ ++++ t++++l+k  cl v+vG++++++++l++N++  +++lv+ ++k+w+ni s++
    EPX72456.1 113 DVLIKQIPRLLGPGLSKAGKFPTPV-SH---NDDLYGKIVEVKS-TIKFQLKKVLCLGVAVGHVEMSEDQLIANVMLSINFLVSLLKKGWQNIGSLV 204
                   *************************.43...79***********.**************************************************** PP

                   EEETTS CS
  Ribosomal_L1 198 lkttms 203
                   +k+tm+
    EPX72456.1 205 IKSTMG 210
                   *****9 PP

>> DUF2482  Hypothetical protein of unknown function (DUF2482)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.5   1.4e+04      34      49 ..      26      41 ..      22      47 .. 0.70
   2 ?   -2.6   0.1      0.93   8.3e+03       9      19 ..      87      97 ..      82     116 .. 0.55
   3 ?   12.8   0.1   1.4e-05      0.12      18      82 ..     139     204 ..     137     214 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.5
     DUF2482 34 dFdillfsaigvsdgd 49
                 F   + ++ig+++ d
  EPX72456.1 26 HFTETVELQIGLKNYD 41
                5666777888888877 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.93
     DUF2482  9 eeikdllaeKs 19
                +++k+l ++K+
  EPX72456.1 87 DDLKKLNKNKK 97
                55555433332 PP

  == domain 3  score: 12.8 bits;  conditional E-value: 1.4e-05
     DUF2482  18 KskeLyelieeikeetdFdillfsaigvsdgdaqvsssslvvGkivglanlLkn.eeefkdivnvi 82 
                  +++Ly  i e+k   +F++  ++++gv+ g +++s  +l+   ++++  l++  ++ +++i   +
  EPX72456.1 139 HNDDLYGKIVEVKSTIKFQLKKVLCLGVAVGHVEMSEDQLIANVMLSINFLVSLlKKGWQNIGSLV 204
                 689******************************9*9999999999998765543245566665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       578  (0.0322383); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.44
# Mc/sec: 1490.00
//
Query:       EPX72457.1  [L=291]
Description: rhomboid protease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-23   83.3  14.1    1.7e-23   83.3  14.1    1.5  2  Rhomboid  Rhomboid family
  ------ inclusion threshold ------
        7.5    7.3  11.1        9.8    7.0   1.2    2.6  2  PrgI      PrgI family protein


Domain annotation for each model (and alignments):
>> Rhomboid  Rhomboid family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       1.3   1.1e+04     132     143 ..      82      93 ..      68      98 .. 0.60
   2 !   83.3  14.1   1.9e-27   1.7e-23      10     145 ..     118     265 ..     113     270 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 1.3
                 HHHHHHHHHHHH CS
    Rhomboid 132 lgGllaGlllgl 143
                 ++G+ +G+++ +
  EPX72457.1  82 IIGINVGIFALW 93 
                 445555555444 PP

  == domain 2  score: 83.3 bits;  conditional E-value: 1.9e-27
                 HHHGGG--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-S........-EESSHHHHHHHHHHHHHHHHCCCCGS----HC CS
    Rhomboid  10 lltsmflHagwlHllfNmlallvfGsplerrlGslrflllyllsglagsllsllfsaeses.....plvGaSGaifgllgallvlvprnrkllrkliia 103
                 ++ s+f+H + +HllfNm+a+++f++ + +++G+ +f+++y +s l+++l+sll+++  +       ++GaSGa++++ +a+++++p++  ++ +l+++
  EPX72457.1 118 IIVSAFSHQSGWHLLFNMMAFYSFAPAILDVFGKNQFIAFYTSSILFSNLASLLHNRFRYGvrahpGSLGASGAVYAIAAATAYFFPNASVSIIFLPFI 216
                 7899***************************************************999766999999****************************9999 PP

                 .......CCCCCCCCCCHHHCTSS...STTTHHHHHHHHHHHHHHHHHH CS
    Rhomboid 104 ....llllllfillnlvlgllpra...ggvsnlAHlgGllaGlllglll 145
                      ++ll +++++++  + +r+   + ++++AHlgG ++G++++ + 
  EPX72457.1 217 pikiGVALLGLMAFDTWGLVSRRFaqyTFFDHAAHLGGGVFGWIYAKYG 265
                 5666566666666666555555559999*****************9765 PP

>> PrgI  PrgI family protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   1.2    0.0011       9.8      20      84 ..      76     142 ..      74     149 .. 0.80
   2 ?    5.1   2.3    0.0043        39      27      74 ..     192     233 ..     186     248 .. 0.73

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0011
        PrgI  20 RQliflvlallvaiglylllrafl...eelasvlvillavPvaal.gfykkdglplekylkaiikfk.lr 84 
                 R +i+ ++++ v+i +++ ++af    e+ a++  +++ +P +++ +f +++g    + l+++++f+ + 
  EPX72457.1  76 RSVIYSIIGINVGIFALWRIPAFHralEKYAVMNPTFVNLPSIIVsAFSHQSGW---HLLFNMMAFYsFA 142
                 889***************99999998899999999999***5555377777777...6677777776555 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.0043
        PrgI  27 lallvaiglylllrafleelasvlvillavPvaalgfykkdglpleky 74 
                 + +++a+++y++ +a++ ++  + +i++ + va+lg+++     ++++
  EPX72457.1 192 VYAIAAATAYFFPNASV-SIIFLPFIPIKIGVALLGLMA-----FDTW 233
                 44567889999999999.888888888888899999984.....4444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (291 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       456  (0.0254337); expected 358.6 (0.02)
Passed bias filter:                      277  (0.0154498); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 2207.45
//
Query:       EPX72458.1  [L=495]
Description: transcription factor TFIIIB complex subunit brf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-34  118.1   1.4    4.8e-18   65.0   0.1    2.6  2  TFIIB          Transcription factor TFIIB repeat
    4.6e-29  100.7   7.0    4.6e-29  100.7   7.0    2.3  3  BRF1           Brf1-like TBP-binding domain
    3.1e-11   42.6   1.0    6.3e-11   41.6   1.0    1.6  1  TF_Zn_Ribbon   TFIIB zinc-binding
    2.3e-05   24.2   0.0      0.039   13.7   0.0    2.6  2  Cyclin_N       Cyclin, N-terminal domain
  ------ inclusion threshold ------
      0.092   12.7   0.1      0.092   12.7   0.1    2.4  3  FAM60A         Protein Family FAM60A
       0.55   10.4   2.8        0.9    9.7   1.3    2.0  2  Spuma_A9PTase  Spumavirus aspartic protease (A9)
        2.2    8.1   8.3      0.074   12.7   2.0    1.8  2  zf-RRN7        Zinc-finger of RNA-polymerase I-specific TFIIB
        2.3    8.9   9.4        5.4    7.7   9.4    1.6  1  VCX_VCY        Variable charge X/Y family


Domain annotation for each model (and alignments):
>> TFIIB  Transcription factor TFIIB repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.8   0.1   2.8e-17   6.2e-14       1      68 [.      89     156 ..      89     159 .. 0.96
   2 !   65.0   0.1   2.1e-21   4.8e-18       1      71 []     183     256 ..     183     256 .. 0.96

  Alignments for each domain:
  == domain 1  score: 51.8 bits;  conditional E-value: 2.8e-17
                 HHHHHHHTT--HHHHHHHHHHHHHHTTSTTTTSGCTTHHHTTHHHHHHTTTTSS--HHHHHHHSS--S CS
       TFIIB   1 ikrfadaleLpekVadaAkelaklaleekvlkGrspagiaAAclyiAcrkeevkrtqkeissvlqVse 68 
                 i+++a al+L e   +aA+  + la +++++kGr+++ ++A+clyi cr +++ ++++++s++lq+++
  EPX72458.1  89 ISALAIALKLNERHVEAAVRYFTLAINNNFIKGRRSQYVVASCLYIVCRYSKTSHMLIDFSDMLQINV 156
                 788999******99***************************************************976 PP

  == domain 2  score: 65.0 bits;  conditional E-value: 2.1e-21
                 HHHHHHHTT--H...HHHHHHHHHHHHHTTSTTTTSGCTTHHHTTHHHHHHTTTTSS--HHHHHHHSS--SHHH CS
       TFIIB   1 ikrfadaleLpe...kVadaAkelaklaleekvlkGrspagiaAAclyiAcrkeevkrtqkeissvlqVsekti 71 
                 i+rfa+ le+      Va++A  l+ ++ ++++  Gr+pagi +Acl+iA+r+++++r+ +ei+ v++V++ ti
  EPX72458.1 183 ISRFAALLEFGPetsRVANDAIRLVARMNRDWMQIGRRPAGICGACLLIAARMNNFRRSVREIVHVVKVADITI 256
                 899*******876889******************************************************9887 PP

>> BRF1  Brf1-like TBP-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0         8   1.8e+04      27      34 ..     209     216 ..     207     219 .. 0.85
   2 ?   -2.4   2.1       2.8   6.2e+03       7       7 ..     364     364 ..     280     388 .. 0.61
   3 !  100.7   7.0     2e-32   4.6e-29       2     101 .]     394     494 ..     393     494 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 8
        BRF1  27 elnkeyLe 34 
                 ++n+++++
  EPX72458.1 209 RMNRDWMQ 216
                 69****96 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 2.8
        BRF1   7 e 7  
                 e
  EPX72458.1 364 E 364
                 2 PP

  == domain 3  score: 100.7 bits;  conditional E-value: 2e-32
        BRF1   2 didddeideyllseeevkiKeriWvelnkeyLeeqeekrlkeeaeeaeadkkkkkkkrkrkkkekkk.gepetaaeavkkmlekkklskkINydaLekL 99 
                 d+dddei+e+ll++eev+ K+++W+elnkeyL e+e+k+lk +++ ++   k+++k+rk ++k++++ g  +t+ae++k+m++++++skkINy+aL+ L
  EPX72458.1 394 DVDDDEIQEILLDKEEVETKTQVWMELNKEYLAEEEAKNLKIQEDLKKGIVKQPRKRRKYRPKDSTSdGLANTPAESAKEMMQQRTFSKKINYEALDML 492
                 89**********************************************99999999999999877764434**************************** PP

        BRF1 100 fd 101
                 f+
  EPX72458.1 493 FN 494
                 95 PP

>> TF_Zn_Ribbon  TFIIB zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.6   1.0   2.8e-14   6.3e-11       2      42 ..       2      42 ..       1      43 [. 0.95

  Alignments for each domain:
  == domain 1  score: 41.6 bits;  conditional E-value: 2.8e-14
                  EETTTTCEECHEETSTTCEEESSSSBEEEECCCCCCCHHHH CS
  TF_Zn_Ribbon  2 kCPnCgstnlveDpergelvCtdCGlVlednsidegpewre 42
                   CP Cgst ++ D ++g+++C +CG+V+e n i++++++ e
    EPX72458.1  2 GCPSCGSTAFESDVASGNTYCLECGVVVEQNAIVSEVTFGE 42
                  6************************************9986 PP

>> Cyclin_N  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.0   1.7e-05     0.039      39      95 ..      90     146 ..      57     162 .. 0.85
   2 !    7.6   0.0    0.0013       2.9      75     104 ..     223     251 ..     191     267 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.7e-05
                 HHHHHHTT--TTHHHHHHHHHHHHHHHS---CCCHHHHHHHHHHHHHHHHSSS---H CS
    Cyclin_N  39 vevaekfkltpetlflavnyldRflskksvpkdklqlvgatcLllAaKveeisppkl 95 
                   +a  +kl+++ +  av+y+   + ++ ++ ++ q v+a+cL++ +++ ++s + +
  EPX72458.1  90 SALAIALKLNERHVEAAVRYFTLAINNNFIKGRRSQYVVASCLYIVCRYSKTSHMLI 146
                 567778999999999***********99*********************99976554 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0013
                 HHHHHHHHHHHHHHSSS---HHHHHHHTTT CS
    Cyclin_N  75 lvgatcLllAaKveeisppkledlvyitde 104
                  ++ +cLl+Aa++++ +  +++++v++++ 
  EPX72458.1 223 GICGACLLIAARMNNFR-RSVREIVHVVKV 251
                 57789********9985.788888887643 PP

>> FAM60A  Protein Family FAM60A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.1         5   1.1e+04      45      64 ..     121     140 ..     118     141 .. 0.75
   2 ?   12.7   0.1   4.1e-05     0.092      46     186 ..     219     365 ..     214     379 .. 0.54
   3 ?   -1.0   2.2      0.67   1.5e+03     101     152 ..     423     473 ..     400     491 .. 0.42

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 5
      FAM60A  45 ekRsGeiCnaCvLLvkRwkk 64 
                  +Rs  +  +C  +v R++k
  EPX72458.1 121 GRRSQYVVASCLYIVCRYSK 140
                 56777778889999999877 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 4.1e-05
      FAM60A  46 kRsGeiCnaCvLLvkRwkkLPagskrnWkhvvdaragpglkslaklkkkekke...........sskkieekfekklkkkkklkktkakasda...... 127
                 +R   iC aC L+  R +     s r+  hvv+       k+l +++ +e+ +           + ++ + +f+k++k +     + +    +      
  EPX72458.1 219 RRPAGICGACLLIAARMNNFR-RSVREIVHVVKVADITIQKRLDEFRITESGDlsiadfrsiwlEGQSDPPSFAKNQKTSADPLDAVS----Ssppikd 312
                 57788************9985.689*********9999999*****999555555555544433222233333333222222211111....1111223 PP

      FAM60A 128 ...........sssereaspassdsasedsdesedeeek......krkkllekkkkrsaeklvsfldlsylkrekv 186
                            +++                        +      k+++l+++ k  s+e+++++l++s   r++v
  EPX72458.1 313 spsqlekqdvpNTQP-----------------------RepspvlKSEELSQNVKIDSQEQQSQLLEESRNIRKEV 365
                 232222222222222.......................12333334444444444455555555555555555444 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 0.67
      FAM60A 101 kkieekfekklkkkkklkktkakasdasssereaspassdsasedsdesede 152
                 +   e+ +k+lk ++ lkk  +k+  ++++ ++ + ++sd  ++   es +e
  EPX72458.1 423 EYLAEEEAKNLKIQEDLKKGIVKQPRKRRK-YRPKDSTSDGLANTPAESAKE 473
                 334444444444444444433333222222.222222222222222222222 PP

>> Spuma_A9PTase  Spumavirus aspartic protease (A9)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       1.3   2.9e+03      32      62 ..      77     107 ..      70     114 .. 0.75
   2 ?    9.7   1.3    0.0004       0.9      78     116 ..     332     371 ..     326     400 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.3
                    EEEEE-SS-EEEEEEEEEEEEESS-EEEEEE CS
  Spuma_A9PTase  32 kkliktihgekeedvyylelkiegrkveaev 62 
                     + ++   g ++     + lk+++r+vea v
     EPX72458.1  77 SREMTIANGRRRISALAIALKLNERHVEAAV 107
                    5556666677777888899999999999877 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.0004
                    HHHHS---XXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXX CS
  Spuma_A9PTase  78 pwlkkkpleltikidleeqqetllkes.alskegkeelkk 116
                    p lk ++l   +kid +eqq +ll+es ++ ke  e+lk+
     EPX72458.1 332 PVLKSEELSQNVKIDSQEQQSQLLEESrNIRKEVSETLKQ 371
                    788999******************9984577777777765 PP

>> zf-RRN7  Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   2.0   3.3e-05     0.074       7      32 .]       3      30 ..       2      30 .. 0.94
   2 ?   -3.4   0.5       3.6   8.1e+03       6      10 ..     224     228 ..     222     228 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 3.3e-05
     zf-RRN7  7 CgvCgcrsftl..ddGfyyCrrChtqeg 32
                C+ Cg++ f +  + G +yC +C+++++
  EPX72458.1  3 CPSCGSTAFESdvASGNTYCLECGVVVE 30
                9**********888***********986 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 3.6
     zf-RRN7   6 pCgvC 10 
                 +Cg+C
  EPX72458.1 224 ICGAC 228
                 68887 PP

>> VCX_VCY  Variable charge X/Y family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   9.4    0.0024       5.4      69     135 ..     306     372 ..     287     376 .. 0.87

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0024
     VCX_VCY  69 gsGpaapGpskppsqelppqelpkeepvsepdplsqetqledplsqetqleeplsdesqveeplsqe 135
                  s p    ps+ + q++p+++  +  pv + + lsq+ +++   +q   lee     ++v+e l+qe
  EPX72458.1 306 SSPPIKDSPSQLEKQDVPNTQPREPSPVLKSEELSQNVKIDSQEQQSQLLEESRNIRKEVSETLKQE 372
                 57788999***********9988999**************999888888999999999******997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (495 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1675  (0.0934241); expected 358.6 (0.02)
Passed bias filter:                      633  (0.0353059); expected 358.6 (0.02)
Passed Vit filter:                        70  (0.00390429); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.64u 0.25s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 3351.68
//
Query:       EPX72459.1  [L=293]
Description: verprolin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      8e-12   44.6   2.5    2.2e-10   40.0   1.4    2.3  2  WH2       WH2 motif


Domain annotation for each model (and alignments):
>> WH2  WH2 motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.0   1.4   1.2e-14   2.2e-10       2      30 .]      25      50 ..      24      50 .. 0.94
   2 !    3.4   0.0    0.0042        75      14      27 ..     107     118 ..     106     120 .. 0.80

  Alignments for each domain:
  == domain 1  score: 40.0 bits;  conditional E-value: 1.2e-14
                -TCCHHHHHHHHHH..HTTBSS--XEEXX CS
         WH2  2 gggRgALLadIraGskaqLKKveetndrs 30
                + +R+ALL +I++G+k  LKK+ +tndrs
  EPX72459.1 25 TKDRSALLNSIQKGTK--LKKA-QTNDRS 50
                689***********88..****.*****8 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.0042
                 HH...HTTBSS--XE CS
         WH2  14 aGs.kaqLKKveetn 27 
                 +G+ k  L+Kv  ++
  EPX72459.1 107 QGMpK--LRKV-GNA 118
                 89999..****.766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       420  (0.0234257); expected 358.6 (0.02)
Passed bias filter:                      161  (0.00897987); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.29s 00:00:00.94 Elapsed: 00:00:00.46
# Mc/sec: 1903.30
//
Query:       EPX72460.1  [L=420]
Description: RNA polymerase II associated Paf1 complex [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.5e-38  132.2   0.2    1.5e-38  132.2   0.2    2.2  2  Leo1            Leo1-like protein
  ------ inclusion threshold ------
      0.026   13.4   0.2      0.038   12.8   0.2    1.2  1  DUF4921         Domain of unknown function (DUF4921)
        0.3   11.4   5.2        2.7    8.3   0.1    2.7  2  ATP-synt_DE     ATP synthase, Delta/Epsilon chain, long alpha


Domain annotation for each model (and alignments):
>> Leo1  Leo1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.2   0.2   2.5e-42   1.5e-38       2     165 .]      97     258 ..      96     258 .. 0.90
   2 ?   -2.9   2.1      0.87   5.2e+03      19      63 ..     332     375 ..     324     392 .. 0.49

  Alignments for each domain:
  == domain 1  score: 132.2 bits;  conditional E-value: 2.5e-42
        Leo1   2 lvklPnflsiepkpfdpetfee..eadeeaeeaeeserarkklkaentiRwRykedkgteikeSNArivrWsDGSlsLqlGsevfdvtrkaladsntyL 98 
                 ++++Pnf+s+e++pfd+e++    eade   +++ +  +r+k+k++ntiRwR ++ +   + eSN+++v+WsDGS+sL +G +++d ++k + ++ t+L
  EPX72460.1  97 HARIPNFMSVEHTPFDSEKYAVeaEADETLLAHDVQWGQRVKHKVDNTIRWRFDK-S--GKPESNSQVVQWSDGSYSLRIGHDIYDAQSKLI-TQPTFL 191
                 689*****************87445666666777999******************.5..89****************************988.899*** PP

        Leo1  99 vvsheaeevleaqgvitekltfrPasleseahrrltravakr.hkkkakktklivteeDpekekeeae 165
                 ++shea+++l+aq+ ++++++f P+ +++++ ++l  +++ r     ++  ++ivte+Dpe+ k+eae
  EPX72460.1 192 TTSHEAQHLLRAQAALKRSFNFLPSAISTATTSKLP-SMRMRgPPLVNRGVQEIVTEKDPELLKREAE 258
                 ***********************************5.455553666678****************997 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.87
        Leo1  19 etfeeeadeeaeeae..eserarkklkaentiRwRykedkgteikeS 63 
                 e++e+e+de a + +  e+e++++ ++  n  R   ++  ++ + eS
  EPX72460.1 332 ENYEDEEDEGALD-DfiEDEEEEEDEEPVNQSRHSPSK--KSASPES 375
                 3454433333332.244333333333333333332222..3344444 PP

>> DUF4921  Domain of unknown function (DUF4921)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.2   6.3e-06     0.038      29     155 ..      39     163 ..      23     203 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 6.3e-06
     DUF4921  29 sekaeetapleeedreeacafcedrkletpPekarlvkeegdakilrgllaeeledtvaefrrvpnLfeivsydyWkknygfeldeeaaarkeeYlaee 127
                 +e+ +e+++l+ ++++++  f+ ++  + +Pek+  vk+  + ++ +   ++ l d++a   r+pn+  +    + ++ y  e +++++  +++    +
  EPX72460.1  39 NENLNENEELK-DNQSDQGLFSDEEGNQESPEKSAPVKKILESEVPNFSSPAPL-DSKAFHARIPNFMSVEHTPFDSEKYAVEAEADETLLAHDVQWGQ 135
                 45566677777.56678899*******************99*999999999999.56677789*******999***********999999999999999 PP

     DUF4921 128 aGrehvlkvvrtklkaagseeeaealse 155
                   ++ v + +r +++++g+ e+++++ +
  EPX72460.1 136 RVKHKVDNTIRWRFDKSGKPESNSQVVQ 163
                 99999*************7666666544 PP

>> ATP-synt_DE  ATP synthase, Delta/Epsilon chain, long alpha-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.1   0.00045       2.7      22      39 ..     194     210 ..     180     212 .. 0.83
   2 ?    3.4   1.8     0.016        94       9      22 ..     261     274 ..     257     291 .. 0.87

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00045
                  HHHHSS-HHHHHHHHHHH CS
  ATP-synt_DE  22 asddnidyarAqaaLrRA 39 
                  + ++++ + rAqaaL+R 
   EPX72460.1 194 S-HEAQHLLRAQAALKRS 210
                  4.7789***********6 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.016
                  HHHHHHHHHHHHHH CS
  ATP-synt_DE   9 eeAkerAeerLeea 22 
                  ee+++rA +rLe++
   EPX72460.1 261 EEERNRARRRLEKR 274
                  899*********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (420 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1710  (0.0953762); expected 358.6 (0.02)
Passed bias filter:                      542  (0.0302304); expected 358.6 (0.02)
Passed Vit filter:                        67  (0.00373696); expected 17.9 (0.001)
Passed Fwd filter:                        21  (0.00117129); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.71u 0.35s 00:00:01.06 Elapsed: 00:00:00.47
# Mc/sec: 2703.69
//
Query:       EPX72461.1  [L=284]
Description: hypothetical protein SOCG_00224 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
          1    9.3   8.6       0.11   12.4   4.3    1.7  2  AIF-MLS     Mitochondria Localisation Sequence
        3.4    7.4  13.6        4.3    7.0   3.7    2.2  2  EMC3_TMCO1  Integral membrane protein EMC3/TMCO1-like


Domain annotation for each model (and alignments):
>> AIF-MLS  Mitochondria Localisation Sequence
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   4.3   1.2e-05      0.11      59     181 ..      16     136 ..      11     165 .. 0.68
   2 ?   -2.8   0.1      0.57   5.1e+03      76      86 ..     227     237 ..     204     271 .. 0.54

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.2e-05
     AIF-MLS  59 GGYYtYktvtseqakhtehitnlkektkaelqplqgekenvaeaekasseapevsvveaevvdaeevpdataavaeeasacpddaeaapvettavsaet 157
                 G YY Y+++t +  k ++  ++lk + +a +++ + ++++++  e++   a e s ++++  ++  +p+  ++ +e ++++  + + +++e t  s   
  EPX72461.1  16 GSYYLYQKITEKSKKPSNGKNELKSRKNAKVNKKKKKTSKITSKEEELVKADE-SQKKVDLEKPTSLPSERVK-TESKKPTKTAYNGGKKEETLSSPPR 112
                 88***********************9999998888888888777777666654.4455555555555544333.3444455556666777766666666 PP

     AIF-MLS 158 epevtdaatgetaevsaeatpevt 181
                 + ++++ +   + + + ++++++ 
  EPX72461.1 113 KHQIAKGKGNASKNDDLQNDQNIS 136
                 666665444444444444444444 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.57
     AIF-MLS  76 ehitnlkektk 86 
                 + i +l+++ k
  EPX72461.1 227 QEIADLEQRKK 237
                 23333333333 PP

>> EMC3_TMCO1  Integral membrane protein EMC3/TMCO1-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   2.3    0.0011       9.8      41      85 ..      26      68 ..       8     108 .. 0.78
   2 ?    7.0   3.7   0.00048       4.3      44      83 ..     209     248 ..     200     265 .. 0.87

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0011
  EMC3_TMCO1 41 kkkmekeqkrekelqkrarelqkngdklklkklekrqeelmedqs 85
                 k  +k     k+ +k  ++++ n++k+k  k+ +++eel ++ +
  EPX72461.1 26 EK-SKKPSN-GKNELKSRKNAKVNKKKKKTSKITSKEEELVKADE 68
                33.333333.4455667799999****************988755 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.00048
  EMC3_TMCO1  44 mekeqkrekelqkrarelqkngdklklkklekrqeelmed 83 
                 ++k q+++++ ++++relq+  d ++ kkl+++++el  +
  EPX72461.1 209 QTKKQRQNQQRKEKFRELQEIADLEQRKKLAAHRNELEMN 248
                 5688999999*************************99655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (284 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2574  (0.143566); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.32s 00:00:00.98 Elapsed: 00:00:00.50
# Mc/sec: 1694.59
//
Query:       EPX72462.1  [L=349]
Description: mitotic-spindle disanchored Msd1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.3e-11   43.5  23.1    3.3e-11   43.5  23.1    2.5  3  ADIP            Afadin- and alpha -actinin-Binding
  ------ inclusion threshold ------
        0.2   12.5   0.3        0.2   12.5   0.3    2.0  2  DHC             Dihaem cytochrome c
        0.4   10.4   6.1       0.56    9.9   0.1    3.0  3  DUF4525         Domain of unknown function (DUF4525)


Domain annotation for each model (and alignments):
>> ADIP  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.5  23.1   5.5e-15   3.3e-11       2     150 ..      14     159 ..      13     161 .. 0.97
   2 ?   -2.6   0.1      0.88   5.3e+03      79      89 ..     219     229 ..     214     241 .. 0.53
   3 ?    0.5   0.3     0.097   5.8e+02      92     121 ..     284     313 ..     263     319 .. 0.68

  Alignments for each domain:
  == domain 1  score: 43.5 bits;  conditional E-value: 5.5e-15
        ADIP   2 naikyINstLlsrGylrskllfdtatekveeniaaiinviysLlqardrdleqreslnetirkleaeierlqskierlktqleqlerelalvqakerql 100
                 ++i+y N +L  +G l++++ + ++   + ++ ++i+nv+y+Ll++++ d +++e+l e+i++ + e+ +     ++l+++l ++ +e ++ + +   l
  EPX72462.1  14 ESIQYVNYKLKDKGILQNEKVHFSD---DVKDKCRIVNVLYQLLRRNEADVQEKENLLERIQNDSIESVKNLELSKQLQRNLDKSLNERQAREDRILML 109
                 6899*********************...999***************************************999999*********************** PP

        ADIP 101 ekklktleqklknekeelqrlknalqqiktqyahelkkkdreiekLkekl 150
                 ek++k+l + +k     l + k + +++k+ ++ +lkk+++++e+L+ ++
  EPX72462.1 110 EKENKKLRKENKDIMNALDKKKHIEAAMKAELSMSLKKREQQMESLRGNY 159
                 **********************************************9876 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.88
        ADIP  79 lktqleqlere 89 
                  k+q+++l+r 
  EPX72462.1 219 IKNQNHKLQRC 229
                 33444444433 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.097
        ADIP  92 lvqakerqlekklktleqklknekeelqrl 121
                 ++ +++ +l+ +l++  + +kn+ ee+++l
  EPX72462.1 284 VSVRDLESLTVELENSMKYTKNLEEENKKL 313
                 555666677777777777777777777765 PP

>> DHC  Dihaem cytochrome c
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.3   3.4e-05       0.2      24      98 ..      27     100 ..      24     107 .. 0.89
   2 ?   -2.4   0.1       1.4   8.5e+03      49      61 ..     125     137 ..     108     166 .. 0.52

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 3.4e-05
                 HHHCGGGGBTTB-----HHHHHHHHHHHHHTSTTTTS-.-GGGTT-TT---S-GGGSHHHHHHHCC--HHHHH.. CS
         DHC  24 klladledHfGedasldeatkkeiseyLeanaaekseakkkilkslkeeiplritesryfkkkHkeveekvlkrk 98 
                  +l++ + Hf +d++ +    + + + L++n a+ +e+ +++l++++++   +++++++ k++ +++++++ +r+
  EPX72462.1  27 GILQNEKVHFSDDVKDKCRIVNVLYQLLRRNEADVQEK-ENLLERIQNDSIESVKNLELSKQLQRNLDKSLNERQ 100
                 589*******************************9995.89*****99999********9999999997665554 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.4
                 HHHHHTSTTTTS- CS
         DHC  49 eyLeanaaeksea 61 
                 + L ++   ++ +
  EPX72462.1 125 NALDKKKHIEAAM 137
                 3333333322222 PP

>> DUF4525  Domain of unknown function (DUF4525)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.4     0.028   1.7e+02      45      70 ..     104     128 ..      83     173 .. 0.71
   2 ?   -0.8   0.1       0.2   1.2e+03      85     102 ..     260     277 ..     256     289 .. 0.84
   3 ?    9.9   0.1   9.3e-05      0.56      48      82 ..     296     332 ..     277     336 .. 0.75

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.028
     DUF4525  45 eqildlskryvkalaeenknvmdgen 70 
                 ++il l k   k l +enk++m++ +
  EPX72462.1 104 DRILMLEKE-NKKLRKENKDIMNALD 128
                 356767665.4779999999998754 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.2
     DUF4525  85 avllddilqrlvklenkv 102
                 av+ld  lq l +l + v
  EPX72462.1 260 AVVLDAKLQNLIRLVAEV 277
                 899*******99997765 PP

  == domain 3  score: 9.9 bits;  conditional E-value: 9.3e-05
     DUF4525  48 ldlskryvkalaeenknvmdgeng..aslagyadlkr 82 
                 l+ s +y k l eenk+++dg     a ++g  d k+
  EPX72462.1 296 LENSMKYTKNLEEENKKLIDGLAHgyALISGQLDYKQ 332
                 56699***************96531145677777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (349 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2147  (0.11975); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.31s 00:00:00.96 Elapsed: 00:00:00.51
# Mc/sec: 2039.60
//
Query:       EPX72463.1  [L=824]
Description: pig-M [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.5e-90  302.4  23.7    3.5e-90  302.4  23.7    2.2  3  Mannosyl_trans  Mannosyltransferase (PIG-M)
    4.3e-06   26.0  22.6    4.3e-06   26.0  22.6    3.5  3  PIG-U           GPI transamidase subunit PIG-U
    0.00046   20.0   9.7    0.00046   20.0   9.7    2.7  2  GT87            Glycosyltransferase family 87


Domain annotation for each model (and alignments):
>> Mannosyl_trans  Mannosyltransferase (PIG-M)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.0   3.3         3   1.8e+04      71      73 ..     147     149 ..      79     206 .. 0.52
   2 ?   -3.5   0.1       1.3   7.5e+03     116     154 ..     427     461 ..     423     483 .. 0.58
   3 !  302.4  23.7   5.8e-94   3.5e-90       1     259 []     565     821 ..     565     821 .. 0.97

  Alignments for each domain:
  == domain 1  score: -5.0 bits;  conditional E-value: 3
  Mannosyl_trans  71 lki 73 
                     ++ 
      EPX72463.1 147 ISF 149
                     222 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 1.3
  Mannosyl_trans 116 rhnfs.lyflllYleeaskvaassilkllaflPqlvllll 154
                      h fs +y++ +Y  ++     s+ l ++ fl +++l+ +
      EPX72463.1 427 SHRFSiPYYFHVYRPSK-----STFLLMTGFLIRVILIKY 461
                     67777335555553222.....334555555555555554 PP

  == domain 3  score: 302.4 bits;  conditional E-value: 5.8e-94
  Mannosyl_trans   1 istrGnadsivailvlltlyllekrkiasaalvlGlavhlkiYPliyalalalslskkkeq.svaakllrllkiavlvlvlvalisllaltllly 94 
                     istrGn+++i+++l+++ + l+e++++  a+ +lG++vh+kiYP+iy +a++ +  +  +q  v++k+ + ++++++++++++l++++ +++l+y
      EPX72463.1 565 ISTRGNCEAILGVLSVALILLIEREHVWLAGFLLGFSVHFKIYPFIYGIAFLFYYANPFKQgPVVKKVASSVSVNQFKILIGSLLAFTLCNILMY 659
                     8******************************************************99999846788999************************** PP

  Mannosyl_trans  95 klYGqefleeaylYhlvrkDhrhnfslyflllYleeaskvaassilkllaflPqlvllllvslkf.rrnlafalfvqtfvfvtfnkvctsqYfvW 188
                      +YG+ fle++y+Yhl r+Dhrhnfs ++l lY e+ask++ s   + laf Pq+ l++l++  + +++la +lf+qtf+fvtfnkvctsqYf+W
      EPX72463.1 660 VIYGKPFLEHTYIYHLGRTDHRHNFSAHHLSLYYESASKQKLS---SFLAFFPQISLCVLIAAVYsTQTLAGTLFAQTFAFVTFNKVCTSQYFLW 751
                     *************************************997744...489************9999899*************************** PP

  Mannosyl_trans 189 ylvlLplllskvkllswkkalvllllWlatqalWllaayllefegkntflllflasllfllanvviLkqll 259
                     yl++Lpl+l+k+kl+s kk+l++l+lW+++qalWll+ay le+ g ++f+ l+l++l+f++anv+iLk++l
      EPX72463.1 752 YLIFLPLILPKSKLIS-KKGLICLILWILGQALWLLNAYRLEMLGNSVFIELWLSGLFFFVANVYILKTIL 821
                     **************99.9**************************************************986 PP

>> PIG-U  GPI transamidase subunit PIG-U
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -7.6   9.0         3   1.8e+04     138     194 ..      37      95 ..       1     158 [. 0.47
   2 ?   -8.4  11.0         3   1.8e+04     139     234 ..     120     215 ..      78     234 .. 0.60
   3 !   26.0  22.6   7.2e-10   4.3e-06       2     364 ..     450     784 ..     449     800 .. 0.72

  Alignments for each domain:
  == domain 1  score: -7.6 bits;  conditional E-value: 3
       PIG-U 138 lscvslSt..svlsnlllllslylalkgkallsalslalatylslypllllapllllll 194
                 l+c+ lS+  +++  +++ l l+++ +++ l+ +  + ++  l+    ll+   +++++
  EPX72463.1  37 LTCLYLSFyyTAIISFFFHLKLISIEPQETLFTIARVPVEEFLNQFAHLLVTSSVYIFI 95 
                 33333333111222222222222222233333333344444444444444444444444 PP

  == domain 2  score: -8.4 bits;  conditional E-value: 3
       PIG-U 139 scvslStsvlsnlll.llslylalkgkallsalslalatylslypllllapllllllkllkaskskkpsksnklskllrllllfllyllvLllaSfl 234
                 +c++l  s+l+  ll   s+++++++  ++ +++ ++a  + +  +++l  + +++++ +++sk+  + ++ +  ++++++l+++ ++ +++ + ++
  EPX72463.1 120 ACIALGASALDSSLLpWGSIMFFMCSLISFLLCFRIIAPIFATSKCIILCSIYAMFVQ-TQKSKFLLTVSNFQNYNYFSIALFSVHMFQGICSVTAF 215
                 4444444444433331445555555445555555555555555555555555556666.55555555555555556666666666666666654444 PP

  == domain 3  score: 26.0 bits;  conditional E-value: 7.2e-10
       PIG-U   2 lgvllrllllslassldenlssrvelstpltsfkrlqEgvallksgispYsggvvhqpPLllallslllssintkslqvlasllflliDllialllyki 100
                 +g+l+r++l++ + +++  ++++    t+++ f    +++++   g spY  ++++  PLl  +l  +       + + + + +f ++D+l++++++ki
  EPX72463.1 450 TGFLIRVILIK-YGNWH--DNKSALKYTDVDYFVF-TDAARYVSLGESPYMRDTYRYTPLLAIFLLPT-----QYGFPSWGKYMFSICDILAGWIIIKI 539
                 56777777743.34444..5555566666666654.89999999999**************9999888.....458889999***************** PP

       PIG-U 101 knkslaksekkreksktkkslsplliaavYlfNPltilscvslStsvlsnlllllslylalkgkallsalslalatylslypllllapllllllkllka 199
                      +++ ++          ++ll a ++++NPl+ + +  + ++++  +l +++++l+ +++++l+ ++l++++++++yp++  + +l+++++ +k+
  EPX72463.1 540 L----KRK-HS-------L-DKSLLYASFWILNPLVAVISTRGNCEAILGVLSVALILLIEREHVWLAGFLLGFSVHFKIYPFIYGIAFLFYYANPFKQ 625
                 2....211.11.......1.5689************999999999999988888888887799***************************999996666 PP

       PIG-U 200 skskkpsksnklskllrllllfllyllvLllaSfllggswsflratygniltvsdltPnlGlfWY.fFtemFdrFr.sfFlfvFqllpflyvlPLtirL 296
                   + k+  s+   + +++l+ +ll++ +  ++ +++ g   fl+ ty+ +l   d+  n   +   +++e  ++ + s+Fl++F  + +++++  +   
  EPX72463.1 626 GPVVKKVASSVSVNQFKILIGSLLAFTLCNILMYVIYG-KPFLEHTYIYHLGRTDHRHNFSAHHLsLYYESASKQKlSSFLAFFPQISLCVLIAAVYST 723
                 66666666666666667777777777555556666555.56*********9999999998887643666666665525688888777777776666553 PP

       PIG-U 297 rkqpllllvlllalilifkpyptvgdlalllsLlplfkellkrmkysfiillillvtllLspvfyhlW 364
                 +   +  l+ ++  +++f+   t   ++ +l++lpl    l++ k  + ++li l+  +L+   + lW
  EPX72463.1 724 QTL-AGTLFAQTFAFVTFNKVCTSQYFLWYLIFLPLI---LPKSKLISKKGLICLILWILG---QALW 784
                 333.333444445555666666666677788888887...666663333334444444444...4444 PP

>> GT87  Glycosyltransferase family 87
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.3      0.16   9.4e+02      20      45 ..     135     160 ..      96     205 .. 0.59
   2 !   20.0   9.7   7.7e-08   0.00046       1     123 [.     500     623 ..     500     792 .. 0.72

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.16
        GT87  20 glalalwallnlaalllalrlllrrl 45 
                 +  ++++ +++l+ +ll+ r+++  +
  EPX72463.1 135 PWGSIMFFMCSLISFLLCFRIIAPIF 160
                 23344555555555555555555555 PP

  == domain 2  score: 20.0 bits;  conditional E-value: 7.7e-08
        GT87   1 FtYPPfaallfaplallpyglalalwallnlaalllalrlllrrlgralasavalalllaalalepvlstlgfGqinllllllvlldllllrrrrplla 99 
                 + Y P+ a++++p ++  +     ++ ++ ++a ++++++l r    +l+  ++ a+++++  l         G+  ++l +l ++  ll++r++ +la
  EPX72463.1 500 YRYTPLLAIFLLPTQYGFPSWGKYMFSICDILAGWIIIKILKRKH--SLDKSLLYASFWILNPLV--AVISTRGNCEAILGVLSVALILLIEREHVWLA 594
                 56***************************************9984..335555555533344444..5555689********************9**** PP

        GT87 100 GlliGlaaaiKltPalfllylll.....r 123
                 G+l+G+ +  K++P + ++++l+      
  EPX72463.1 595 GFLLGFSVHFKIYPFIYGIAFLFyyanpF 623
                 *******************9998554440 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (824 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       949  (0.052931); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.72u 0.33s 00:00:01.05 Elapsed: 00:00:00.49
# Mc/sec: 5092.27
//
Query:       EPX72464.1  [L=167]
Description: F1-ATPase delta subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.1e-17   61.3   0.0    9.5e-17   60.7   0.0    1.3  1  ATP-synt_DE_N  ATP synthase, Delta/Epsilon chain, beta-sandwi
  ------ inclusion threshold ------
       0.14   12.1   0.0       0.32   11.0   0.0    1.7  1  GP79           Gene product 79


Domain annotation for each model (and alignments):
>> ATP-synt_DE_N  ATP synthase, Delta/Epsilon chain, beta-sandwich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.7   0.0   1.1e-20   9.5e-17       3      75 ..      40     114 ..      38     119 .. 0.91

  Alignments for each domain:
  == domain 1  score: 60.7 bits;  conditional E-value: 1.1e-20
                    EEEEESSSEEEEEE.EEEEEEEESSSEEEE-TT--SEEEEEESEEEEEEEGGGEEEEEEESSEEEEEE.TTEEEE CS
  ATP-synt_DE_N   3 leivtpervvfsge.veevvaptteGelgilpgHaplitaLkpgelriktedgeeesiavsgGflevq.dnkvti 75 
                    l+   p r+vf++  v++v +pt++Ge+g+l++H+p++  L+pg+++i++e +   +++vsgGf+  q  n++++
     EPX72464.1  40 LSMALPYRTVFDKVpVTQVDLPTEDGEMGVLKDHVPMVQCLRPGVIQITDESNAVSKYFVSGGFAVQQpSNELSV 114
                    56678********9***************************************************9984467666 PP

>> GP79  Gene product 79
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   3.6e-05      0.32       2      29 ..      39      66 ..      38      79 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 3.6e-05
        GP79  2 vlaLAdpyeaaAdkvtfdqaeFPCeEDE 29
                +l++A py    dkv+++q + P e+ E
  EPX72464.1 39 ILSMALPYRTVFDKVPVTQVDLPTEDGE 66
                6899*******************99877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       507  (0.0282782); expected 358.6 (0.02)
Passed bias filter:                      469  (0.0261587); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.30s 00:00:00.73 Elapsed: 00:00:00.46
# Mc/sec: 1102.25
//
Query:       EPX72465.1  [L=722]
Description: RNA hairpin binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-13   50.1   0.4    1.4e-12   47.6   0.1    2.1  2  SAM_2     SAM domain (Sterile alpha motif)
      3e-06   27.6   0.0    5.9e-06   26.6   0.0    1.5  1  SAM_1     SAM domain (Sterile alpha motif)
  ------ inclusion threshold ------
       0.13   12.3   2.4       0.39   10.8   2.4    1.8  1  PRIMA1    Proline-rich membrane anchor 1


Domain annotation for each model (and alignments):
>> SAM_2  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.15   8.9e+02       5      19 ..     117     131 ..     115     135 .. 0.85
   2 !   47.6   0.1   2.3e-16   1.4e-12       6      65 ..     614     670 ..     610     671 .. 0.95

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.15
                 HHHHHHHHHHHTTTG CS
       SAM_2   5 sledvaeWLrsiglk 19 
                 +l+++++W++s+ l+
  EPX72465.1 117 ELQNISQWFQSLSLA 131
                 5789*******9885 PP

  == domain 2  score: 47.6 bits;  conditional E-value: 2.3e-16
                 HHHHHHHHHHTTTGGGHHHHHHTTCSHHHHHTTSCHHHHHHTTHHHHHHHHHHHHHHHHH CS
       SAM_2   6 ledvaeWLrsiglkqytdnFrdagitgaelllrlteedLkrlGitsvghrkkilkkiqel 65 
                 ++d+ +WLrs++l++yt+n++d  + g   l  lt edL+  Gi+++g r+k+lk++q++
  EPX72465.1 614 PQDIPSWLRSLRLHKYTNNLKDTDWNG---LVSLTDEDLQNRGIHALGARRKLLKSFQDV 670
                 899************************...99**************************86 PP

>> SAM_1  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.0   9.9e-10   5.9e-06       5      61 ..     614     668 ..     611     671 .. 0.92

  Alignments for each domain:
  == domain 1  score: 26.6 bits;  conditional E-value: 9.9e-10
                 HSSHHHHHHHTTSGGGHHHHHTTTSSHHHHTTSCHHHHHHCTTTSHHHHHHHHHHHH CS
       SAM_1   5 vedVgeWLesiglgqYadlFrageidgdaLlllteddLeklgvtllGHrkkIlyaIq 61 
                 ++d+  WL+s++l++Y++++    +d+  L  lt++dL++ g+  lG r+k+l++ q
  EPX72465.1 614 PQDIPSWLRSLRLHKYTNNL--KDTDWNGLVSLTDEDLQNRGIHALGARRKLLKSFQ 668
                 57999***************..6689***************************9865 PP

>> PRIMA1  Proline-rich membrane anchor 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   2.4   6.5e-05      0.39      30      53 ..     381     404 ..     367     411 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 6.5e-05
      PRIMA1  30 pppppppppprllsltaaestvsp 53 
                  +pppppppp ll++++ + +v++
  EPX72465.1 381 YSPPPPPPPPDLLTANSNQRSVPE 404
                 57999********99988776654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (722 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1015  (0.0566122); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.29s 00:00:00.94 Elapsed: 00:00:00.47
# Mc/sec: 4590.74
//
Query:       EPX72466.1  [L=528]
Description: zf-C3HC4 type /GCN5-like N acetyltransferase fusion protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.5e-13   51.0   0.0    3.1e-13   50.0   0.0    1.5  1  Acetyltransf_1   Acetyltransferase (GNAT) family
      5e-09   36.2   0.0    1.1e-08   35.1   0.0    1.5  1  Acetyltransf_10  Acetyltransferase (GNAT) domain
    2.8e-08   33.5   2.0    5.9e-08   32.4   2.0    1.6  1  zf-CCCH          Zinc finger C-x8-C-x5-C-x3-H type (and simil
    3.3e-08   33.8   0.0    8.8e-08   32.5   0.0    1.7  1  Acetyltransf_7   Acetyltransferase (GNAT) domain
    1.6e-06   27.9   7.9    2.8e-06   27.1   7.9    1.4  1  zf-C3HC4_3       Zinc finger, C3HC4 type (RING finger)
    3.6e-05   23.5  11.1    6.5e-05   22.7  11.1    1.4  1  zf-C3HC4_2       Zinc finger, C3HC4 type (RING finger)
    0.00011   22.1   4.1    0.00023   21.1   4.1    1.6  1  zf_CCCH_4        Zinc finger domain
    0.00014   21.9   6.7    0.00032   20.8   6.7    1.6  1  zf-RING_10       zinc RING finger of MSL2
    0.00043   20.2  11.0      0.001   19.0  11.0    1.7  1  zf-RING_UBOX     RING-type zinc-finger
     0.0014   18.9  10.2     0.0028   17.9  10.2    1.5  1  zf-RING_2        Ring finger domain
     0.0014   18.4  13.0     0.0028   17.5  13.0    1.5  1  zf-C3HC4         Zinc finger, C3HC4 type (RING finger)
     0.0041   17.0  10.9     0.0083   16.1  10.9    1.6  1  zf-RING_5        zinc-RING finger domain
  ------ inclusion threshold ------
      0.031   14.1   1.9      0.031   14.1   1.9    2.4  2  zf-CCCH_4        CCCH-type zinc finger
      0.037   13.9   8.3      0.072   13.0   8.3    1.5  1  Prok-RING_4      Prokaryotic RING finger family 4
       0.13   12.3   0.1       0.39   10.7   0.0    1.8  2  FR47             FR47-like protein
       0.14   12.4   7.5       0.39   10.9   7.5    1.9  1  zf-C3HC4_4       zinc finger of C3HC4-type, RING


Domain annotation for each model (and alignments):
>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.0   0.0   2.7e-16   3.1e-13      19     117 .]     401     496 ..     383     496 .. 0.91

  Alignments for each domain:
  == domain 1  score: 50.0 bits;  conditional E-value: 2.7e-16
                     HHHHHHHHHHHSTTCEEEEEEETTEEEEEEEEEEEETTSTTEEEEEEEEESGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTEHHHHHHHH CS
  Acetyltransf_1  19 aseeefeesfsleaegllvaeedgeliGfisllkipdekggvayieslaVspeyrgkGlGsaLlealeerareegikkivlaveedndaairlYe 113
                        e f++s  +++e   va+++++++G +s+ k+ d   +  yi  + V   yr+ G+GsaLl+ + + ar+  +++i l+v+ +n+ +++ Y+
      EPX72466.1 401 NYSETFYKSILKDNELSRVALFENKVVGGLSCIKNKD---EILYIATFSVLAPYRNLGIGSALLDFANRSARRLAYNAITLHVRCSNEDSVNWYT 492
                     45566889999999999999*****************...9****************************************************** PP

                     HTTE CS
  Acetyltransf_1 114 klGF 117
                     + GF
      EPX72466.1 493 RRGF 496
                     ***9 PP

>> Acetyltransf_10  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.1   0.0   9.4e-12   1.1e-08      18     110 ..     402     500 ..     380     504 .. 0.83

  Alignments for each domain:
  == domain 1  score: 35.1 bits;  conditional E-value: 9.4e-12
  Acetyltransf_10  18 spealrerieegealllvaeeggkivGviel.rdgs...hisllfVdpeyrgqGigkaLleaveeeaekdgikl.eltvnasp.yavpfYeklG 105
                      + e++++ i + + l  va  ++k+vG ++  ++++   +i+ + V   yr  Gig+aLl+++ + a++  ++  +l+v+ s+   v+ Y + G
       EPX72466.1 402 YSETFYKSILKDNELSRVALFENKVVGGLSCiKNKDeilYIATFSVLAPYRNLGIGSALLDFANRSARRLAYNAiTLHVRCSNeDSVNWYTRRG 495
                      4588999995555555555556699988877688889************************************9******9999********** PP

  Acetyltransf_10 106 Fkavg 110
                      F  ++
       EPX72466.1 496 FNIIE 500
                      *8765 PP

>> zf-CCCH  Zinc finger C-x8-C-x5-C-x3-H type (and similar)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.4   2.0   5.2e-11   5.9e-08       1      26 [.     188     213 ..     188     214 .. 0.92

  Alignments for each domain:
  == domain 1  score: 32.4 bits;  conditional E-value: 5.2e-11
                 -HCHCBCHHHHHS--TTGGG-SSBSC CS
     zf-CCCH   1 yktelCrffmrtGyCkyGdrCkFaHg 26 
                 y+   C++++ tG+C yGd+CkF H 
  EPX72466.1 188 YQPDVCKDYKLTGFCGYGDTCKFLHM 213
                 66789********************6 PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.5   0.0   7.8e-11   8.8e-08       7      75 ..     419     497 ..     401     498 .. 0.68

  Alignments for each domain:
  == domain 1  score: 32.5 bits;  conditional E-value: 7.8e-11
                     EEEETTEEEEEEEEEEES...TCTEEEEE-GGGTTSSHHHHHHHHTT.......SEEE.EE.EEEETHHHHHHHHHHTTEE CS
  Acetyltransf_7   7 VaeddgkivGfialslld...aeitrlaVdpeyrgkGiGraLleaae.......kgii.le.qlelnaekaikfYeklGFe 75 
                     Va  ++k+vG +++  ++    +i  + V+  yr+ GiG+aLl++a+          + ++ +++ ++e ++++Y + GF 
      EPX72466.1 419 VALFENKVVGGLSCIKNKdeiLYIATFSVLAPYRNLGIGSALLDFANrsarrlaY--NaITlHVRCSNEDSVNWYTRRGFN 497
                     67777999*9877777765555555588****************83333323322..13344455555589*********5 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   7.9   2.5e-09   2.8e-06       4      46 ..     256     297 ..     254     301 .. 0.94

  Alignments for each domain:
  == domain 1  score: 27.1 bits;  conditional E-value: 2.5e-09
                 B-TTTSSSBS-EEETTEEEEEE-HHHHHHHHHTT-B-TTT--B CS
  zf-C3HC4_3   4 eCviClerprnvvllpCgHlvlCeeCaekllkrkkkCpiCrrp 46 
                  C+iC++  +n ++  C+H  +Ce+Ca +  +++++C  C ++
  EPX72466.1 256 VCLICKKDYKNPIVTICRHH-FCESCAVEQYRKSPTCVQCGAD 297
                 5*******************.*******************876 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7  11.1   5.8e-08   6.5e-05       2      40 .]     257     294 ..     256     294 .. 0.95

  Alignments for each domain:
  == domain 1  score: 22.7 bits;  conditional E-value: 5.8e-08
  zf-C3HC4_2   2 CpiCldmlkdpsvvtpCgHvfCqkCilrsLeekneCPlC 40 
                 C iC   +k+p  vt C H fC++C  +  +++  C +C
  EPX72466.1 257 CLICKKDYKNP-IVTICRHHFCESCAVEQYRKSPTCVQC 294
                 ***********.999*************999999**888 PP

>> zf_CCCH_4  Zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   4.1   2.1e-07   0.00023       1      19 []     193     212 ..     193     212 .. 0.99

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 2.1e-07
   zf_CCCH_4   1 Ckfflq.GtCkkGdkCrFaH 19 
                 Ck ++  G C +Gd C+F+H
  EPX72466.1 193 CKDYKLtGFCGYGDTCKFLH 212
                 ******************** PP

>> zf-RING_10  zinc RING finger of MSL2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   6.7   2.9e-07   0.00032       2      60 ..     256     313 ..     255     317 .. 0.85

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 2.9e-07
  zf-RING_10   2 sCvvCckLLvdPlepkekeCqHyvCrlCvgkkkklkpsCsqCk..dyekyeenkqlrlllq 60 
                  C++C k  ++P+    + C H+ C +C  ++ +  p+C qC       ++ +kq++lll+
  EPX72466.1 256 VCLICKKDYKNPIV---TICRHHFCESCAVEQYRKSPTCVQCGadTKGLFSIDKQMNLLLK 313
                 58889887777766...58***********************9734456999*****9996 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0  11.0   9.1e-07     0.001       1      38 [.     257     291 ..     257     294 .. 0.76

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 9.1e-07
  zf-RING_UBOX   1 CpIClelftdPlvlpCGHtFCreClwelskslegafkC 38 
                   C IC+ ++++P+v+ C H FC++C     ++ +++ +C
    EPX72466.1 257 CLICKKDYKNPIVTICRHHFCESCA---VEQYRKSPTC 291
                   99*********5567**********...4444444444 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9  10.2   2.5e-06    0.0028       3      43 ..     257     294 ..     255     295 .. 0.84

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 2.5e-06
   zf-RING_2   3 CpICleelssadsvlllpCgHvfhreClerwlrssstCPlC 43 
                 C IC ++++++  ++   C+H+f+++C+ +  r+s+tC  C
  EPX72466.1 257 CLICKKDYKNPIVTI---CRHHFCESCAVEQYRKSPTCVQC 294
                 ****99997543333...*********98889******999 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5  13.0   2.5e-06    0.0028       1      41 []     257     294 ..     257     294 .. 0.97

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 2.5e-06
                 -TTT-S--SS-E.E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepnelleCkHsfCskCirkilksrkkvkCPlC 41 
                 C iC++ +k+p  ++ C+H fC++C ++ ++  k+ +C +C
  EPX72466.1 257 CLICKKDYKNPI-VTICRHHFCESCAVEQYR--KSPTCVQC 294
                 99**********.***************999..9999*999 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1  10.9   7.4e-06    0.0083       2      43 ..     257     295 ..     256     296 .. 0.95

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 7.4e-06
   zf-RING_5   2 CnkCfeklskeekfyltsCgHifCekClkkllekeavCpiCr 43 
                 C +C + +   +++++t C H fCe+C+ ++  k+ +C +C+
  EPX72466.1 257 CLICKKDY---KNPIVTICRHHFCESCAVEQYRKSPTCVQCG 295
                 99******...9********************9********7 PP

>> zf-CCCH_4  CCCH-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   1.9   2.7e-05     0.031       2      21 ..     192     212 ..     191     212 .. 0.96
   2 ?    0.8   0.9      0.41   4.6e+02       2      11 ..     271     280 ..     270     281 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2.7e-05
   zf-CCCH_4   2 lCpyfa.kGsCrfGdnCrFsH 21 
                 +C+ +  +G C +Gd C+F+H
  EPX72466.1 192 VCKDYKlTGFCGYGDTCKFLH 212
                 7999999************** PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.41
   zf-CCCH_4   2 lCpyfakGsC 11 
                 +C++ +++sC
  EPX72466.1 271 ICRHHFCESC 280
                 7********* PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   8.3   6.5e-05     0.072       1      35 [.     257     293 ..     257     300 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 6.5e-05
  Prok-RING_4   1 CvlCgeqekkailepCgHlvCkeCfdsk..dls.sCPl 35 
                  C++C++  k++i+  C H +C++C  ++  + s +C  
   EPX72466.1 257 CLICKKDYKNPIVTICRHHFCESCAVEQyrK-SpTCVQ 293
                  ************************8876322.235544 PP

>> FR47  FR47-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       6.3   7.1e+03      56      70 ..     362     376 ..     360     377 .. 0.82
   2 ?   10.7   0.0   0.00035      0.39      24      80 ..     442     499 ..     430     503 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 6.3
                 -EEEEEETT-HHHHH CS
        FR47  56 tvllvvvasNtpsir 70 
                 t ++  vasN+ps+r
  EPX72466.1 362 TTSVASVASNKPSSR 376
                 67888999****986 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00035
                 EEEEEE-GGG-SSSHHHHHHHHHHHHHHH.S-S-EEEEEETT-HHHHHHHHHHT-EEE CS
        FR47  24 lgalqvlpehrrrGlgsrlvkalakeiae.rgktvllvvvasNtpsirlyeklGfeki 80 
                 +    vl   r+ G gs l     +  ++ + + ++l+v+ sN+ s + y++ Gf+ i
  EPX72466.1 442 IATFSVLAPYRNLGIGSALLDFANRSARRlAYNAITLHVRCSNEDSVNWYTRRGFNII 499
                 55677889999********9999999999788899********************977 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   7.5   0.00035      0.39       1      42 []     257     294 ..     257     296 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00035
  zf-C3HC4_4   1 CPiCldYLekPvsleCGhsfClsCisslqkepdgeqllCplC 42 
                 C iC +  ++P+   C h fC sC  +   ++     +C +C
  EPX72466.1 257 CLICKKDYKNPIVTICRHHFCESCAVEQYRKS----PTCVQC 294
                 99***999****************76655554....356666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (528 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1544  (0.0861175); expected 358.6 (0.02)
Passed bias filter:                      521  (0.0290591); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 3797.26
//
Query:       EPX72467.1  [L=872]
Description: splicing factor Cwf22 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.1e-29  101.2   0.3      6e-29  100.3   0.3    1.5  1  MA3       MA3 domain


Domain annotation for each model (and alignments):
>> MA3  MA3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.3   0.3   3.3e-33     6e-29       1     112 [.     401     506 ..     401     507 .. 0.98

  Alignments for each domain:
  == domain 1  score: 100.3 bits;  conditional E-value: 3.3e-33
                 HHHHHHHHHHSSS...SHHHHHHHHHHTT--.TTHHHHHHHHHHHHHHS.SS--HHHHHHHHHHHCC-HHHHHHHHHHHHHHHHGGGGS-HH...HHHH CS
         MA3   1 lrrkifliieeylssgdyeeavsklekLklp.kqeheivkillecaleesktyneyygllleklceknlilkkqfekgfwdvlesledleldipeairn 98 
                 lr++i+l+i++++   d+ee+++kl+k +lp  qe e +++++ec  +e +ty+++ygl+ e++c+ n++++++fe++f++++++++++e++   ++rn
  EPX72467.1 401 LRKSIYLTIMSSV---DFEECCHKLLKVQLPeGQEIEMCNMIIECNSQE-RTYEKFYGLIGERFCKLNRNWRSTFEQTFKNYYTTIHRYETN---RLRN 492
                 69***********...*********************************.******************************************...**** PP

                 HHHHHHHHHHTTSS CS
         MA3  99 laefvarlisediL 112
                 +a f+++l+s+  +
  EPX72467.1 493 IALFFGNLLSTNSI 506
                 *********98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (872 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       793  (0.04423); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.68u 0.28s 00:00:00.96 Elapsed: 00:00:00.62
# Mc/sec: 4268.63
//
Query:       EPX72468.1  [L=298]
Description: 4-nitrophenylphosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.9e-28   97.0   0.0      1e-27   96.2   0.0    1.4  1  Hydrolase_6      Haloacid dehalogenase-like hydrolase
    4.7e-15   55.4   0.0    8.3e-15   54.6   0.0    1.4  1  Hydrolase_like   HAD-hyrolase-like
    1.4e-10   41.8   0.0    3.8e-10   40.4   0.0    1.9  1  Hydrolase        haloacid dehalogenase-like hydrolase
    1.3e-07   31.9   0.1     0.0028   17.8   0.0    2.5  3  HAD_2            Haloacid dehalogenase-like hydrolase
     0.0064   16.1   0.0       0.57    9.8   0.0    2.2  2  PGP_phosphatase  Mitochondrial PGP phosphatase
  ------ inclusion threshold ------
      0.031   14.0   0.1        6.5    6.4   0.0    2.4  2  PNK3P            Polynucleotide kinase 3 phosphatase


Domain annotation for each model (and alignments):
>> Hydrolase_6  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.2   0.0   3.4e-31     1e-27       1     101 []      21     124 ..      21     124 .. 0.96

  Alignments for each domain:
  == domain 1  score: 96.2 bits;  conditional E-value: 3.4e-31
                  EEEESTTTSEETTEE-TTHHHHHHHHHHTT-EEEEEE---SS-HHHHHHHHHHTT----GGGEEEHHHHHHHHHHHH...SXXXEEEEESXHHHHHHH CS
  Hydrolase_6   1 flfDidGvLwrgdkaipgaaealnalraagkpvvllTNnsskseeeyakkleklgvditeeqvvtsataaaeylkkr...kadkkvlvigeeglreel 95 
                  flfD+dGvLw g++++pg++++++ lr++gk++++++Nns+ks+e+y+kk+++ +++++ e+++ sa++ a y+kk     +dkkv+++ge g+++el
   EPX72468.1  21 FLFDCDGVLWSGNEPLPGVKDTMELLRSSGKQIIFVSNNSTKSREDYMKKINAHEIEAKLEEIYPSAYSSAIYVKKVlklPEDKKVFILGEGGIESEL 118
                  89*************************************************************************9744577**************** PP

                  HHTTXE CS
  Hydrolase_6  96 keagfk 101
                  + +g+k
   EPX72468.1 119 DRVGVK 124
                  **9986 PP

>> Hydrolase_like  HAD-hyrolase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.6   0.0   2.8e-18   8.3e-15       2      75 .]     218     294 ..     217     294 .. 0.91

  Alignments for each domain:
  == domain 1  score: 54.6 bits;  conditional E-value: 2.8e-18
                     .STTSSHHHHHHHHHH---GGGEEEEES-TTTHHHHHHHCT-EE.EEESSSSS-TTTHHH..HHHHHT---SEEES- CS
  Hydrolase_like   2 lgKPepemydfalevlgsdpeevlmiGDrlatDiagAnnaGwks.vLVltGvtrpedlee..pehkptyvaddlaea 75 
                     lgKP  em++++++ ++ d+++ +++GDrl+tDi++A+n G+ + +LVltGv+++++  e  ++  p+y++++l ++
      EPX72468.1 218 LGKPYDEMMEAIVAGVNFDRKKACFVGDRLNTDIQFAKNSGLGGsLLVLTGVSQESEIYEkdAPVVPDYYINSLGDL 294
                     7****************************************9765**********98877434479******99885 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.4   0.0   1.3e-13   3.8e-10       2     210 .]      19     258 ..      18     258 .. 0.69

  Alignments for each domain:
  == domain 1  score: 40.4 bits;  conditional E-value: 1.3e-13
                 SEEEEESBTTTBCHH...HHHHHHHHHHCHHHHHHHHHH......HHCHHHHHH.HHHHHHH..HHHH..HHHHHETTTE.............HHHHTH CS
                 xxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxx......xxxxxxxxx.xxxxxxx..xxxx..xxxxxxxxxx.............xxxxxx RF
   Hydrolase   2 ktvvfDkdGTLttge...psvedvivsaalalaaaletg......sehpigkal.vaaakar..sgal..tgfatfigrg.............ayaigk 73 
                 ++++fD+dG+L+ g+   p v+d+++ + ++ ++++ ++      s+  + k++ +++ +a   +  +  + +                    ++  g+
  EPX72468.1  19 DVFLFDCDGVLWSGNeplPGVKDTMELL-RSSGKQIIFVsnnstkSREDYMKKInAHEIEAKleE--IypSAYSSA---IyvkkvlklpedkkVFILGE 111
                 789*************************.666666666668888877777777755555555431..322333331...01223443333334333333 PP

                 HHHHHHHHCHHHHHHHHHHHHHHCHHHHHH.......................TTHHHHHHHHHHTHHBHTTHHHHHHHHHHTTEEEEEEESSEHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  74 pewltaldippdlgaaigsaqsqgrtvall.......................qaralavftiadplkvkpeaaeavasLkaagievvlltgdnpetae 149
                      +l       +++g           +                       +  + av+   d +  + +   a ++L++ ++  +llt+++++++ 
  EPX72468.1 112 GGIESEL-------DRVGV----------KhtggtdaslrravnsddlntirpDPSIGAVLCGMDRHVTYLKYCMAYQYLQDPNC-AFLLTNQDSTFPT 192
                 3333333.......11111..........12222333333555566777888899******************************.********99999 PP

                 HHHHHTT...GGGE.SEEEEHHCES..STTTSHHHHHHHHHHHTSTGGGEEEEESSHH.HHHHHHHTT CS
                 xxxxxxx...xxxx.xxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxx RF
   Hydrolase 150 raanqlG...ddyf.daviasdiet..vakpspegkvaaireLqgkpeevamVGDgvn.DaaalaaAg 210
                       G     y   ++ +++      +kp  e+++a++   + + ++ ++VGD++n D++++++ g
  EPX72468.1 193 NGTFFPGsgsISYPlIFSTGRT--PkiLGKPYDEMMEAIVAGVNFDRKKACFVGDRLNtDIQFAKNSG 258
                 6666666545444434444444..356*************************************9876 PP

>> HAD_2  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       1.1   3.4e+03       2      11 ..      22      31 ..      21      35 .. 0.83
   2 !   11.3   0.0   9.2e-05      0.28      79     125 ..      34      83 ..      26      90 .. 0.75
   3 !   17.8   0.0   9.4e-07    0.0028     134     173 ..     219     259 ..     207     261 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 1.1
       HAD_2  2 iFDlDgTlld 11
                +FD Dg+l  
  EPX72468.1 22 LFDCDGVLWS 31
                8******975 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 9.2e-05
       HAD_2  79 kpydgvkelLeeLkeagyklgivTsk...sreaveekleqlgiesyFdvi 125
                 +p++gvk+++e L++ g ++  v+++   sre  ++k+++++ie  ++ i
  EPX72468.1  34 EPLPGVKDTMELLRSSGKQIIFVSNNstkSREDYMKKINAHEIEAKLEEI 83 
                 799********************998222444555555555566666666 PP

  == domain 3  score: 17.8 bits;  conditional E-value: 9.4e-07
       HAD_2 134 kKPdpeviekaleklklkkeeviyvGDsp.tDieaakkagi 173
                  KP  e++e+++   +++++++ +vGD   tDi+ ak+ g+
  EPX72468.1 219 GKPYDEMMEAIVAGVNFDRKKACFVGDRLnTDIQFAKNSGL 259
                 59***************************9********996 PP

>> PGP_phosphatase  Mitochondrial PGP phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.3   0.0    0.0094        28      62     104 ..      37      79 ..       9      91 .. 0.68
   2 !    9.8   0.0   0.00019      0.57     138     158 ..     239     259 ..     224     270 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.0094
  PGP_phosphatase  62 eeikekleelrevypeksilivSNsaGssd.dk.daekaealekk 104
                      + +k+++e lr+   +k+i+ vSN +  s  d+ ++ +a+++e+k
       EPX72468.1  37 PGVKDTMELLRSS--GKQIIFVSNNSTKSReDYmKKINAHEIEAK 79 
                      5567777777764..447999999876555354133445555555 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00019
  PGP_phosphatase 138 eiavvgDRllTdvllanmmGs 158
                      +  +vgDRl Td+ +a+  G 
       EPX72468.1 239 KACFVGDRLNTDIQFAKNSGL 259
                      5579*************9884 PP

>> PNK3P  Polynucleotide kinase 3 phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0    0.0022       6.5      33      77 ..      38      84 ..      19     106 .. 0.85
   2 ?    5.1   0.0    0.0055        16     103     129 ..     222     248 ..     166     260 .. 0.76

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0022
       PNK3P 33 svlekLkklkeegykivifsNqggvvek..ktkkslekfkekieall 77
                 v+++++ l + g +i+++sN++  +++   +k +++++  k+e++ 
  EPX72468.1 38 GVKDTMELLRSSGKQIIFVSNNSTKSREdyMKKINAHEIEAKLEEIY 84
                4899999999************9999987788888899999998876 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.0055
       PNK3P 103 weelkkdleekleidkeksfyvGDaag 129
                 ++e+++ + +++++d++k  +vGD  +
  EPX72468.1 222 YDEMMEAIVAGVNFDRKKACFVGDRLN 248
                 455555555667779999999999655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (298 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       497  (0.0277205); expected 358.6 (0.02)
Passed bias filter:                      469  (0.0261587); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.48u 0.30s 00:00:00.78 Elapsed: 00:00:00.44
# Mc/sec: 2051.79
//
Query:       EPX72469.1  [L=641]
Description: transcription factor TFIID complex subunit Taf5- like [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.3e-44  148.0  11.8    4.1e-09   36.9   0.3    6.5  6  WD40         WD domain, G-beta repeat
    2.7e-40  137.6   0.4    4.9e-40  136.8   0.4    1.4  1  TFIID_NTD2   WD40 associated region in TFIID subunit, NTD2 do
    5.6e-14   52.2   0.0     0.0092   16.3   0.0    5.6  6  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    4.8e-06   25.8   0.3          1    8.2   0.0    4.8  6  Ge1_WD40     WD40 region of Ge1, enhancer of mRNA-decapping p
    0.00027   20.4   0.1     0.0065   15.8   0.1    2.7  1  WD40_like    WD40-like domain
     0.0025   16.5   0.1       0.27    9.8   0.1    3.1  3  Nup160       Nucleoporin Nup120/160
     0.0033   17.3   0.1     0.0094   15.9   0.1    1.9  1  LisH         LisH
  ------ inclusion threshold ------
      0.078   12.2   0.0       0.22   10.8   0.0    1.7  2  RAB3GAP2_N   Rab3 GTPase-activating protein regulatory subuni
       0.21   11.5   0.2       0.92    9.5   0.0    2.1  2  DUF2415      Uncharacterised protein domain (DUF2415)


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   0.0   0.00014      0.29       7      35 ..     342     373 ..     338     374 .. 0.81
   2 !   20.2   0.0   4.1e-07   0.00081       6      38 .]     397     430 ..     391     430 .. 0.88
   3 !   33.6   0.1   2.3e-11   4.6e-08       4      38 .]     437     472 ..     433     472 .. 0.88
   4 !   36.9   0.3   2.1e-12   4.1e-09       3      38 .]     478     514 ..     476     514 .. 0.96
   5 !   22.0   0.1   1.1e-07   0.00022       1      38 []     518     556 ..     518     556 .. 0.95
   6 !   25.9   0.0   6.2e-09   1.2e-05       2      38 .]     561     598 ..     560     598 .. 0.93

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00014
                 EESS...SSEEEEEEETTSSEEEEEETTSEEE CS
        WD40   7 ltGH...ssvtslafspdgawlasGsdDgtvr 35 
                 +t H   ss ++ +fspd +++a+G  D +v 
  EPX72469.1 342 YTMHntySSLNCAKFSPDASMFATGYADSSVQ 373
                 5667544569***************99*9985 PP

  == domain 2  score: 20.2 bits;  conditional E-value: 4.1e-07
                 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +l GH  +v +++ spd+ +++s+s+Dg  r+W+
  EPX72469.1 397 KLIGHtRPVFGVSISPDNEYILSCSEDGFNRLWS 430
                 467**777*********************99995 PP

  == domain 3  score: 33.6 bits;  conditional E-value: 2.3e-11
                 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 l ++ GH  +v++++fsp+g ++as+s D+tvr+W+
  EPX72469.1 437 LVKYAGHnAPVWDVCFSPYGYYFASASHDQTVRLWS 472
                 55688**777**************9999*******5 PP

  == domain 4  score: 36.9 bits;  conditional E-value: 2.1e-12
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +lr++ GH ++v +l+f+ + +++a+Gs D+t+r+Wd
  EPX72469.1 478 PLRVFVGHqNDVDCLSFHENANYIATGSSDHTCRFWD 514
                 799*****999****************99*******9 PP

  == domain 5  score: 22.0 bits;  conditional E-value: 1.1e-07
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 g+++r++tG+ ssv+s+a spdg ++as++d g v++Wd
  EPX72469.1 518 GNTVRVFTGQnSSVSSIALSPDGLLMASADDTGFVHLWD 556
                 6789******888*************************9 PP

  == domain 6  score: 25.9 bits;  conditional E-value: 6.2e-09
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++l +++ H ++v+slafs d++ la+G+ D  + +Wd
  EPX72469.1 561 SKLEVFEKHqNPVYSLAFSYDNKTLATGGADTDINVWD 598
                 56778999*999*************************9 PP

>> TFIID_NTD2  WD40 associated region in TFIID subunit, NTD2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.8   0.4   2.4e-43   4.9e-40       3     130 .]      57     187 ..      55     187 .. 0.98

  Alignments for each domain:
  == domain 1  score: 136.8 bits;  conditional E-value: 2.4e-43
                 XXHHHHHHHHHHHHHHHTS-HHHHHHHGGGHHHHHHHHHHHHHHTT-HHHHHHHHHHHGGGGGGGHH.HHHHHTT--SHHHHHHSHHHHHHHHS-EEEE CS
  TFIID_NTD2   3 dpekyekayelLkkwiessldiykpeLsrllyPvFvhlyLelvakgaeeeakkFfekfkedhealhkedlkkLasisspehleenelakafrenkyrik 101
                  pe+y + y lL++wi+ +ld+ykp+L+++lyPvFvh+yL+l++k++++ a  Ff++f+++he lh +d++ L +++++++++e+e+ + +r+nkyri+
  EPX72469.1  57 APETYIQVYILLRDWIDGTLDLYKPKLQKTLYPVFVHSYLDLLQKKEKDMAAFFFDSFRGEHEVLHGHDIRLLDELKTNSDADESEISQLYRKNKYRIN 155
                 589************************************************************************************************ PP

                 EEHHHHHHHHHHHHHTT-H...HHHHHHHHHE CS
  TFIID_NTD2 102 lskaafelLlrfLeekeka...vllkilnehl 130
                 l+ka+f+lL++fL ++e++   +++++ln+++
  EPX72469.1 156 LTKATFDLLVQFLFDNEANgsgIIIRLLNQYI 187
                 ******************99**********97 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0     0.011        23      29      68 ..     339     378 ..     320     403 .. 0.83
   2 ?   -0.8   0.0      0.99     2e+03      39      76 ..     403     440 ..     395     445 .. 0.84
   3 !   14.0   0.0   2.4e-05     0.047      30      92 .]     429     497 ..     409     497 .. 0.85
   4 !   16.3   0.0   4.6e-06    0.0092      37      85 ..     485     532 ..     479     534 .. 0.89
   5 !   15.2   0.0     1e-05      0.02      28      87 ..     522     576 ..     519     578 .. 0.88
   6 !    8.2   0.0    0.0015       2.9      36      68 ..     568     600 ..     565     609 .. 0.91

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.011
  ANAPC4_WD40  29 vwtleedkedsevrsLaWkpdgklLavaysdgevrlldae 68 
                  v+  + +++ s+ ++ +++pd +++a +y+d++v+l  ++
   EPX72469.1 339 VFMYTMHNTYSSLNCAKFSPDASMFATGYADSSVQLQISK 378
                  6666778888999999******************996544 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.99
  ANAPC4_WD40  39 sevrsLaWkpdgklLavaysdgevrlldaesgkvvhsl 76 
                  + v +++ +pd++ +    +dg  rl + e++ ++ ++
   EPX72469.1 403 RPVFGVSISPDNEYILSCSEDGFNRLWSKETQSTLVKY 440
                  667788899999****************9999998776 PP

  == domain 3  score: 14.0 bits;  conditional E-value: 2.4e-05
  ANAPC4_WD40  30 wtl.......eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWgen 92 
                  w+        + ++++  v +++++p g  +a a +d +vrl ++e++  ++ +  +++  v cl++ en
   EPX72469.1 429 WSKetqstlvKYAGHNAPVWDVCFSPYGYYFASASHDQTVRLWSIEHTAPLRVFVGHQN-DVDCLSFHEN 497
                  544444455566788999************************************88888.5****99875 PP

  == domain 4  score: 16.3 bits;  conditional E-value: 4.6e-06
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavt 85 
                  +++ v +L+++++ + +a + sd ++r+ d+ +g++v+ ++ ++++ v+
   EPX72469.1 485 HQNDVDCLSFHENANYIATGSSDHTCRFWDIRTGNTVRVFTGQNSS-VS 532
                  7889**********************************99887774.66 PP

  == domain 5  score: 15.2 bits;  conditional E-value: 1e-05
  ANAPC4_WD40  28 rvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtcl 87 
                  rv+t+    ++s+v+s+a +pdg l+a a + g v+l d  +g  ++ ++ +++  v +l
   EPX72469.1 522 RVFTG----QNSSVSSIALSPDGLLMASADDTGFVHLWDLRTGSKLEVFEKHQNP-VYSL 576
                  67776....899*************************************999884.6665 PP

  == domain 6  score: 8.2 bits;  conditional E-value: 0.0015
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldae 68 
                  k+++ v sLa++ d+k La + +d+ +++ d++
   EPX72469.1 568 KHQNPVYSLAFSYDNKTLATGGADTDINVWDIK 600
                  78999**********************999875 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0     0.019        38     187     213 ..     347     374 ..     334     394 .. 0.82
   2 ?   -0.2   0.0      0.19   3.7e+02     169     214 ..     382     429 ..     374     436 .. 0.77
   3 !    8.2   0.0   0.00052         1     173     217 ..     429     474 ..     418     492 .. 0.86
   4 ?   -0.8   0.0      0.29   5.8e+02     189     218 ..     488     517 ..     477     523 .. 0.81
   5 !    5.6   0.0    0.0033       6.6     185     216 ..     526     557 ..     515     569 .. 0.87
   6 ?    1.4   0.0     0.063   1.2e+02     186     218 ..     568     601 ..     559     621 .. 0.79

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.019
    Ge1_WD40 187 h.sliveaafspdGtalatasedGevkf 213
                 + s + +a fspd    at  +d  v++
  EPX72469.1 347 TySSLNCAKFSPDASMFATGYADSSVQL 374
                 336899*****************99974 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.19
    Ge1_WD40 169 sgelsveeiee.gllkieehs.liveaafspdGtalatasedGevkff 214
                  ++l  +++e   ++k+  h+  +   ++spd   +  +sedG+ +++
  EPX72469.1 382 PQALVGNQNEPlDTIKLIGHTrPVFGVSISPDNEYILSCSEDGFNRLW 429
                 555555555555678877777589999****************99988 PP

  == domain 3  score: 8.2 bits;  conditional E-value: 0.00052
    Ge1_WD40 173 sveeieegllkieehs.liveaafspdGtalatasedGevkffqvy 217
                  ++e++++l+k   h   + +  fsp G   a as+d +v+++ + 
  EPX72469.1 429 WSKETQSTLVKYAGHNaPVWDVCFSPYGYYFASASHDQTVRLWSIE 474
                 567778899999988648*************************985 PP

  == domain 4  score: -0.8 bits;  conditional E-value: 0.29
    Ge1_WD40 189 liveaafspdGtalatasedGevkffqvyl 218
                  + + +f  +   +at s+d + +f+ +  
  EPX72469.1 488 DVDCLSFHENANYIATGSSDHTCRFWDIRT 517
                 5667788888899*************9965 PP

  == domain 5  score: 5.6 bits;  conditional E-value: 0.0033
    Ge1_WD40 185 eehsliveaafspdGtalatasedGevkffqv 216
                  ++s +++ a+spdG  +a a   G+v+++ +
  EPX72469.1 526 GQNSSVSSIALSPDGLLMASADDTGFVHLWDL 557
                 46789999********************9976 PP

  == domain 6  score: 1.4 bits;  conditional E-value: 0.063
    Ge1_WD40 186 ehs.liveaafspdGtalatasedGevkffqvyl 218
                 +h   + + afs d  +lat  +d  +  + +  
  EPX72469.1 568 KHQnPVYSLAFSYDNKTLATGGADTDINVWDIKG 601
                 4433688899*****************9999864 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.1   3.3e-06    0.0065       6     106 ..     492     596 ..     487     635 .. 0.72

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 3.3e-06
   WD40_like   6 idiskkgslilyGgkddkctvlkleslesvsivesfedSvifvklldddlilvvtlD..Gtillsllenee..evenekieedistv.kviddklliGt 99 
                 + + +++++i+ G+ d++c+  +++++++v ++++ + Sv  +  l+ d +l+++ D  G + l +l+ +   ev +++ +   s + +++++ l+ G+
  EPX72469.1 492 LSFHENANYIATGSSDHTCRFWDIRTGNTVRVFTGQNSSVSSI-ALSPDGLLMASADdtGFVHLWDLRTGSklEVFEKHQNPVYSLAfSYDNKTLATGG 589
                 5677899****************************99999866.5677777777777456666667777665555555544444543145555566666 PP

   WD40_like 100 nkGsiyv 106
                    +i v
  EPX72469.1 590 ADTDINV 596
                 6665555 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0     0.029        57     223     253 ..     406     437 ..     396     440 .. 0.84
   2 ?   -0.5   0.0      0.18   3.6e+02     234     250 ..     460     476 ..     457     483 .. 0.81
   3 !    9.8   0.1   0.00014      0.27     229     257 ..     497     525 ..     485     573 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.029
                 T......TTTEEEEEETT-EEEEEETTTTEEE CS
      Nup160 223 vavvei.gqtylfalsrdgkLrvWnlltgkcl 253
                 ++v+ + ++ y+++ s dg+ r+W+ +t+++l
  EPX72469.1 406 FGVSISpDNEYILSCSEDGFNRLWSKETQSTL 437
                 55554479********************9875 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.18
                 EEEETT-EEEEEETTTT CS
      Nup160 234 falsrdgkLrvWnlltg 250
                 +++s d+++r+W+++  
  EPX72469.1 460 ASASHDQTVRLWSIEHT 476
                 68999********9865 PP

  == domain 3  score: 9.8 bits;  conditional E-value: 0.00014
                 TTTEEEEEETT-EEEEEETTTTEEEEEEE CS
      Nup160 229 gqtylfalsrdgkLrvWnlltgkclatid 257
                 + +y+++ s+d++ r W+++tg ++++++
  EPX72469.1 497 NANYIATGSSDHTCRFWDIRTGNTVRVFT 525
                 89********************9998765 PP

>> LisH  LisH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.1   4.7e-06    0.0094       2      26 ..      15      39 ..      14      40 .. 0.94

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 4.7e-06
                HHHHHHHHHHHHCT-HHHHHHHHHH CS
        LisH  2 eLNrLIydYLvkeGyeetAeaFekE 26
                +LN +++dYL  +Gy+ t ++++ E
  EPX72469.1 15 DLNKIVLDYLYRKGYSRTEAMLRLE 39
                8********************9977 PP

>> RAB3GAP2_N  Rab3 GTPase-activating protein regulatory subunit N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0         1   2.1e+03     270     321 ..     365     416 ..     338     428 .. 0.56
   2 ?   10.8   0.0   0.00011      0.22     310     342 ..     531     563 ..     519     567 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1
  RAB3GAP2_N 270 Ggssksseeqqtkkeekkkpkve.paaplslrfgLkDskRegesivlsPsgrl 321
                 +g  +ss + q +k++  +  v  + +pl ++  L  + R +  +++sP++++
  EPX72469.1 365 TGYADSSVQLQISKNSGPQALVGnQNEPLDTI-KLIGHTRPVFGVSISPDNEY 416
                 33333444444433333333222366666654.56666788888888888765 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00011
  RAB3GAP2_N 310 gesivlsPsgrlaavtDsLgRVlLlDvqagvvv 342
                 + si+lsP+g l a +D+ g V L+D+++g  +
  EPX72469.1 531 VSSIALSPDGLLMASADDTGFVHLWDLRTGSKL 563
                 689************************998765 PP

>> DUF2415  Uncharacterised protein domain (DUF2415)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       1.8   3.5e+03       5      13 ..     353     361 ..     351     362 .. 0.83
   2 ?    9.5   0.0   0.00046      0.92      17      36 ..     542     561 ..     531     570 .. 0.75

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 1.8
     DUF2415   5 vckFSpesg 13 
                 + kFSp  +
  EPX72469.1 353 CAKFSPDAS 361
                 78***9877 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00046
     DUF2415  17 LLvisEhvgrvHlvDlRtgl 36 
                 L+  + + g vHl DlRtg 
  EPX72469.1 542 LMASADDTGFVHLWDLRTGS 561
                 888899***********943 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (641 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       489  (0.0272742); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.65u 0.31s 00:00:00.96 Elapsed: 00:00:00.48
# Mc/sec: 3982.45
//
Query:       EPX72470.1  [L=212]
Description: hypothetical protein SOCG_00233 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-31  109.9   0.0    1.8e-31  109.6   0.0    1.0  1  AKAP7_NLS     AKAP7 2'5' RNA ligase-like domain
  ------ inclusion threshold ------
      0.091   12.1   0.0       0.14   11.4   0.0    1.2  1  Herpes_BTRF1  Herpesvirus BTRF1 protein conserved region


Domain annotation for each model (and alignments):
>> AKAP7_NLS  AKAP7 2'5' RNA ligase-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.6   0.0   2.1e-35   1.8e-31       4     207 .]      11     211 ..      10     211 .. 0.96

  Alignments for each domain:
  == domain 1  score: 109.6 bits;  conditional E-value: 2.1e-35
                 EEEEE---HHHHHHHHHHHHHHHHH-GGGGGGB.--TT--EEEEEEE---SHHHHHHHHHHHHHHHHHHHHHHTTS--EEEEEEEEEE.....TTTEEE CS
   AKAP7_NLS   4 FlsiplnsnklrkklekfqesvlsklpgldeslfikpeklHlTllvlkLknkeeiaaakevLkevkeeikdaldnkplslrlkGletfnddpakarVlY 102
                 Fl++pl + +lr+ +e f++ + +++   + s+   p+  HlT++++ ++++e++ ++ + Lk+  +++++a   + + ++l+G ++f+++p +arVlY
  EPX72470.1  11 FLALPLPECCLRESFETFRNFLGNSFL--STSY-RGPRVSHLTIGMIPVNSEEDVLRSINHLKNNTDNFQKAYGDELQTIDLQGTSYFGKSPDEARVLY 106
                 9*********************99887..5555.779999********************************97799********************** PP

                 EEE--SHHHHHHHHHHHHHHHHHHTTT--B--SS-.---EEEEEEGGG-THHHHTT--S--GG.GGGGGTT-EE.EEEE--EEEEEESSS---T.TS-- CS
   AKAP7_NLS 103 akveeesneekLqeladriikafeeaglvlekdkkkvklHaTlmnsrkrkkkqakskesfdareilkqfkdfef.geekineihLsqlesddes.dgyY 199
                 a  +e++ + + q++++ ++k fe+ag+++++++  ++lH+Tl+n r+ k+ +++ k +fda+ +l++f ++++ ++  ++++ +++ +    + d yY
  EPX72470.1 107 AVPQEQHGRVNVQKFCEYLRKSFEDAGIFIKDNRP-LTLHCTLLNARYMKRGKKRLK-HFDAKPVLEKFVNYSWaQNMSLSKLCIMKTGAVGPPgDMYY 203
                 ***********************************.****************99998.****************88889**********999999**** PP

                 EEEEEEE- CS
   AKAP7_NLS 200 kviasvkl 207
                 + i+s++l
  EPX72470.1 204 EEIDSISL 211
                 ****9986 PP

>> Herpes_BTRF1  Herpesvirus BTRF1 protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   1.6e-05      0.14     122     159 ..      62     100 ..      59     105 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 1.6e-05
  Herpes_BTRF1 122 lLkslg.LenivqdFealygselepvtekeakaFeklle 159
                   +L+s++ L+n+  +F+++yg+el+++  + + +F k   
    EPX72470.1  62 VLRSINhLKNNTDNFQKAYGDELQTIDLQGTSYFGKSPD 100
                   67788669**************************98655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       546  (0.0304535); expected 358.6 (0.02)
Passed bias filter:                      517  (0.028836); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 1503.14
//
Query:       EPX72471.1  [L=140]
Description: hypothetical protein SOCG_00234 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1915  (0.10681); expected 358.6 (0.02)
Passed bias filter:                      628  (0.0350271); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1008.16
//
Query:       EPX72472.1  [L=260]
Description: Mam33 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      8e-18   65.2   1.1    9.1e-18   65.0   1.1    1.0  1  MAM33     Mitochondrial glycoprotein


Domain annotation for each model (and alignments):
>> MAM33  Mitochondrial glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.0   1.1   5.1e-22   9.1e-18      29     212 .]      75     250 ..      50     250 .. 0.80

  Alignments for each domain:
  == domain 1  score: 65.0 bits;  conditional E-value: 5.1e-22
       MAM33  29 ggFeiedkpgkeevtLtrkfgdekIrvtfsvadlaneeeeeeeeeeeeedeaeeeeeeeeeeeeeeeesfpvrlsvtiekpgksggaLelectaqdgef 127
                   F+i+++p  + +  t++ ++e+Ir+t+ v +  + ++ ++++ e++e+e++++  +e         + ++++ v+i+k+   +g++  ++  +++e+
  EPX72472.1  75 RSFTIHENPLRNYIAATKELENERIRITVPVYSARA-SYTDKNNVEQTEEEEKSDGLDEL-----GYFQQSIPTYVQITKD---EGTMICSLILNKDEI 164
                 78*****************************88777.55555555555555544444444.....4578899*********...599999********* PP

       MAM33 128 vidnvsyykdaelakeet.aeadwkrrllyeGPpFenLDedLqellerYLeerGIdeelaefipdysevkEqkeYvrWLenvkkFv 212
                 + d++ + +++++  ++     + +++++y G + ++L + L+ +l +YLee+ I++++   +++ +  kE+  Y +WLe++ +++
  EPX72472.1 165 IFDSLLFDQNKDSSFASAdLALALRKSSRYRGRKAKKLPNVLKSSLIKYLEEKEITAQVIRALISRIWRKENLSYKTWLEDILHYI 250
                 *******988776655441344559999****************************************************997775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       805  (0.0448993); expected 358.6 (0.02)
Passed bias filter:                      538  (0.0300073); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 1900.95
//
Query:       EPX72473.1  [L=471]
Description: nuclear rim protein Amo1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.5e-08   31.8   2.3    1.4e-07   31.1   2.3    1.4  1  zf-CCCH_4  CCCH-type zinc finger
    2.6e-06   27.3   4.6    4.4e-06   26.6   4.6    1.4  1  zf_CCCH_4  Zinc finger domain
     0.0018   18.1   1.5     0.0028   17.5   1.5    1.3  1  zf-CCCH    Zinc finger C-x8-C-x5-C-x3-H type (and similar)
  ------ inclusion threshold ------
        0.1   12.8   0.0        1.5    9.1   0.0    2.1  2  DUF4090    Protein of unknown function (DUF4090)
       0.13   13.0   0.6       0.31   11.8   0.6    1.6  1  Torus      Torus domain


Domain annotation for each model (and alignments):
>> zf-CCCH_4  CCCH-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.1   2.3     4e-11   1.4e-07       2      21 ..       3      22 ..       2      23 .. 0.96

  Alignments for each domain:
  == domain 1  score: 31.1 bits;  conditional E-value: 4e-11
   zf-CCCH_4  2 lCpyfakGsCrfGdnCrFsH 21
                +C++f++++Cr G nCrF+H
  EPX72473.1  3 VCKFFLENRCRNGTNCRFEH 22
                8******************* PP

>> zf_CCCH_4  Zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   4.6   1.2e-09   4.4e-06       1      19 []       4      22 ..       4      22 .. 0.99

  Alignments for each domain:
  == domain 1  score: 26.6 bits;  conditional E-value: 1.2e-09
   zf_CCCH_4  1 CkfflqGtCkkGdkCrFaH 19
                Ckffl+++C++G++CrF H
  EPX72473.1  4 CKFFLENRCRNGTNCRFEH 22
                *****************99 PP

>> zf-CCCH  Zinc finger C-x8-C-x5-C-x3-H type (and similar)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   1.5   7.9e-07    0.0028       4      26 ..       2      23 ..       1      24 [. 0.92

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 7.9e-07
                HCBCHHHHHS--TTGGG-SSBSC CS
     zf-CCCH  4 elCrffmrtGyCkyGdrCkFaHg 26
                + C+ff++   C+ G +C+F H+
  EPX72473.1  2 AVCKFFLE-NRCRNGTNCRFEHV 23
                68******.***********996 PP

>> DUF4090  Protein of unknown function (DUF4090)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.13   4.6e+02      56      73 ..      49      66 ..      46      74 .. 0.81
   2 ?    9.1   0.0   0.00042       1.5      26      61 ..     127     165 ..     118     186 .. 0.72

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.13
     DUF4090 56 akhldqeelnqllleagf 73
                +khl+++el++ l  a+ 
  EPX72473.1 49 SKHLKRAELDRYLPIAKT 66
                8*********99976654 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00042
     DUF4090  26 elykevmale..akrqrsGvkksmrsriv.riGakhldq 61 
                 el +++ +++  a  +r G  + mr+r+v ++G k +  
  EPX72473.1 127 ELLNDISHKQktALTNREGAVNEMRNRLVgKTGVKSIFD 165
                 5556665444114578***********99899*998744 PP

>> Torus  Torus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.6   8.6e-05      0.31      72      97 ..       3      28 ..       1      36 [. 0.88

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 8.6e-05
                B-HHHHHT--SSGGG-SSB-S---SS CS
       Torus 72 fClfFarGlCakGkkCeylHrlPtee 97
                +C fF    C +G++C++ H  P+ +
  EPX72473.1  3 VCKFFLENRCRNGTNCRFEHVYPHLK 28
                8*******************999765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (471 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       492  (0.0274416); expected 358.6 (0.02)
Passed bias filter:                      287  (0.0160076); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 3399.12
//
Query:       EPX72474.1  [L=608]
Description: cystathionine gamma-synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.2e-32  110.3   0.0    1.1e-31  109.7   0.0    1.2  1  Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
  ------ inclusion threshold ------
      0.047   12.9   0.1       0.18   11.0   0.0    1.9  2  Aminotran_1_2    Aminotransferase class I and II
        0.1   11.4   0.0       0.16   10.8   0.0    1.2  1  Glyco_hydro_77   4-alpha-glucanotransferase


Domain annotation for each model (and alignments):
>> Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.7   0.0   1.8e-35   1.1e-31      68     381 ..     292     607 ..     279     608 .] 0.84

  Alignments for each domain:
  == domain 1  score: 109.7 bits;  conditional E-value: 1.8e-35
                      SEEEEESSHHHHHHHHHHTTS-T...TEEEEEESTSSHHHHHHHHHTHHHTTCEEEEESTTSHHHHHHHCCT..TEEEEEEESS-TTTT----H CS
  Cys_Met_Meta_PP  68 eaalavssGmaAiaaailallka...GdeivvsddlYggtqrllkkvlkklgievkfvdtsdleelekaike..ntklvylEtptnpllkvvDi 156
                      e ++++++Gm++i +a + l k+     + v+   +Y  t ++l+k   + +  +   + s+l+e+e+ +++  ++  ++ E p+npll+++D+
       EPX72474.1 292 EDVYLFPTGMSSIYNAHRILRKTldgSRKSVCFGFCYVDTLKILEKWG-QGCYFYGLGNASQLDEFENLLESgeKVLGLFCEFPSNPLLNTPDL 384
                      678999*****9966654444442213345666666666666555543.33455556688999******9984466668*************** PP

                      HHHHHHHHHTT-EEEEEGTTTHTTTS-GGGGT-SEEEEETTTTTTCSSS--EEEEEESSCHHHHHHHHH.HHHHHT-B--HHHHHHHHHHHTTH CS
  Cys_Met_Meta_PP 157 ekiaklakkagvlvvvDntfaspllqrplklgaDivvhSaTKylgGhsdvvaGvivvkgkeelkkelkf.lqnalGavlspfdawlllrGlkTL 249
                       +i +la k +  vvvD t+   l+++ l + aD+vv S TK  +G s+v++G +v +   +l  +lk  +++         da +l r  +  
       EPX72474.1 385 VRIRRLANKYDFAVVVDETIGNFLNVEVLPY-ADMVVSSLTKIFSGDSNVMGGSLVLNPLSRLYGKLKEgMTKLYEDNFYDEDALTLERNSRDF 477
                      *****************************99.9*************************99999999887456677889999************* PP

                      HHHHHHHHHHHHHHHHHHHTSTTEEEEE-TTST.TSTTHHHHHHHSSSG-SEEEEEESSHHHHHHHHHHC-SSSEECSS-SSSS-EEEETTTTT CS
  Cys_Met_Meta_PP 250 slRlerhqenAlkvAefLekhpkvekvyYpglp.shpqhelakkqlkgaggvlsFelkseeekakkfvdnlklfslaeslGgveslielpasmt 342
                      + R +  +enA  + e L+k+pkv+++yYp  + s+ ++e  k+++ g+gg+ls   ++    a++f d++++++   slG   +l++  ++  
       EPX72474.1 478 ADRSKVINENAEVICELLRKSPKVKQLYYPKYNiSSTNYEACKRNNGGYGGLLSVVFHDP-CDARRFYDHIRVAK-GPSLGTNFTLASPYTIIA 569
                      ******************************9875889********************999.57*********875.79*******998777776 PP

                      TTTSCHHHHHHTTS-TTEEEEE--SS-HHHHHHHHHHHH CS
  Cys_Met_Meta_PP 343 hasipkeereaagvtddliRlsvGiEdvdDliaDlkqal 381
                      h +   +  e++g++ +l+R+svG+E  + l a +++al
       EPX72474.1 570 HYQEL-DWAEENGINRNLVRVSVGMEPKKHLSAVFSEAL 607
                      66644.4567899****************9999999988 PP

>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1      0.19   1.1e+03     241     285 ..     196     240 ..     189     257 .. 0.82
   2 ?   11.0   0.0     3e-05      0.18     132     195 ..     353     409 ..     344     459 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.19
                    HHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Aminotran_1_2 241 sqlrklsrpflsssllqaavaaalsdallkqseleemrqrlqkrr 285
                     +l++ sr+ + s++  +a+  ++sd+++ ++   + ++r+ ++r
     EPX72474.1 196 LHLKSKSRSRYASAHDMEALQSWMSDDNQSNEAEMTDVSRYLEER 240
                    68899999999999999**********999995555555555544 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 3e-05
                    HHHHHHHHTTHHCTTETEEEEEEESS-TTT--B--HHHHHHHHHHHHHTTEEEEEEETTTTCBS CS
  Aminotran_1_2 132 lealeealkeapegnkktkvilvesphNPtGtvatleeleklldlakkynlllfvDeaYagfvf 195
                    l+++e++l++  e   k+ +++ e p+NP    ++ ++l+ + +la+ky + ++vDe+ + f  
     EPX72474.1 353 LDEFENLLESG-E---KVLGLFCEFPSNPL---LNTPDLVRIRRLANKYDFAVVVDETIGNFLN 409
                    68889999983.3...4679*********6...777777777777************9776655 PP

>> Glyco_hydro_77  4-alpha-glucanotransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   2.7e-05      0.16     352     407 ..     182     239 ..     167     260 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 2.7e-05
                     EGGGTTSTTTT.TTSGGGS-SSEEEES--TTS--HHHHHTHHHHH...HHHHHHHHHHH CS
  Glyco_hydro_77 352 vlqfafedeenefylphnypensvvytgtHDndtlrgwweeerak...ekealleylke 407
                     v+ +a++ +  ++ l h  ++    y + HD++ l++w+++++++   e + + +yl+e
      EPX72474.1 182 VQTMAKQGSY-KQSLLHLKSKSRSRYASAHDMEALQSWMSDDNQSneaEMTDVSRYLEE 239
                     6677775554.47888888999999**************87777733333455555543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (608 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       562  (0.0313459); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.46
# Mc/sec: 4001.82
//
Query:       EPX72475.1  [L=133]
Description: hypothetical protein SOCG_00238 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     0.0031   16.9   2.8     0.0036   16.7   2.8    1.1  1  Tropomyosin     Tropomyosin
  ------ inclusion threshold ------
      0.048   13.0   0.1       0.06   12.7   0.1    1.2  1  Viral_env_E26   Virus envelope protein E26
       0.21   11.7   3.0       0.15   12.2   0.8    1.7  2  DUF848          Gammaherpesvirus protein of unknown function 
       0.33   11.1   3.8         13    6.0   1.2    2.2  2  Thioredoxin_16  Thioredoxin-like domain


Domain annotation for each model (and alignments):
>> Tropomyosin  Tropomyosin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   2.8     8e-07    0.0036     106     184 ..      55     133 .]      37     133 .] 0.89

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 8e-07
  Tropomyosin 106 eiaeeadrkyeEvarklvvvesdLeraeeraeaaeskiveLeeeLkvvgnnlksLevseekaseredeyeeeirtLeek 184
                  ++++e   + +     +++++++Le+    +e+ es ++ L + ++  + nl +L  s++ka +r ++ ee +++L +k
   EPX72475.1  55 RLNNEETAREDDTDSTVKLTDTELEELPPGGELIESSCHLLSSVFTHLQSNLNKLNESHKKALKRIEQLEEIVEELRKK 133
                  566666667778888899********************************************************99876 PP

>> Viral_env_E26  Virus envelope protein E26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   1.3e-05      0.06      56      98 ..      90     129 ..      70     133 .] 0.79

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1.3e-05
  Viral_env_E26  56 kichiisslrnthl..nfnkiqsvhkkklrhlqnllrkkneiiae 98 
                      ch++ss+  thl  n+nk++  hkk l+ +++l    +ei+ e
     EPX72475.1  90 SSCHLLSSVF-THLqsNLNKLNESHKKALKRIEQL----EEIVEE 129
                    56*****985.5654499************99877....344444 PP

>> DUF848  Gammaherpesvirus protein of unknown function (DUF848)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.36   1.6e+03      51      67 ..      60      76 ..      41      85 .. 0.47
   2 ?   12.2   0.8   3.3e-05      0.15      58     102 ..      88     132 ..      84     133 .] 0.90

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.36
      DUF848 51 qlkrtkeikalveavdt 67
                ++ r+ +  ++v++ dt
  EPX72475.1 60 ETAREDDTDSTVKLTDT 76
                22222222333333333 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 3.3e-05
      DUF848  58 ikalveavdteieakkkelslLkklnrkkvarveeLtdkvlelke 102
                 i+++ +++  ++++ + +l++L++  +k+++r+e+L + v+el++
  EPX72475.1  88 IESSCHLLSSVFTHLQSNLNKLNESHKKALKRIEQLEEIVEELRK 132
                 56677888999999*****************************96 PP

>> Thioredoxin_16  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   1.2    0.0029        13      10      32 ..       4      26 ..       3      65 .. 0.84
   2 ?    5.9   0.1    0.0031        14      32      63 ..      88     119 ..      80     127 .. 0.75

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0029
  Thioredoxin_16 10 anPsspPySllvlkkllkeklkv 32
                     nP+ pP+Sl +  +ll+e+ ++
      EPX72475.1  4 SNPNTPPVSLPYEPQLLSEYPSL 26
                    69*********999999887665 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0031
  Thioredoxin_16  32 vlvkvhvHSsv.sslpenllksfeestskksrs 63 
                     +++++h+ Ssv ++l +nl ++++es++k  ++
      EPX72475.1  88 IESSCHLLSSVfTHLQSNL-NKLNESHKKALKR 119
                     5788999999977788887.8888888665544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1418  (0.0790897); expected 358.6 (0.02)
Passed bias filter:                      757  (0.0422221); expected 358.6 (0.02)
Passed Vit filter:                       109  (0.00607954); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.47u 0.29s 00:00:00.76 Elapsed: 00:00:00.45
# Mc/sec: 896.58
//
Query:       EPX72476.1  [L=718]
Description: autophagy associated protein Atg9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   8.3e-173  575.8  21.7   9.8e-173  575.6  21.7    1.0  1  APG9      Autophagy protein Apg9
  ------ inclusion threshold ------
       0.12   12.8   0.0       0.32   11.4   0.0    1.6  1  POB3_N    POB3-like N-terminal PH domain


Domain annotation for each model (and alignments):
>> APG9  Autophagy protein Apg9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  575.6  21.7  1.1e-176  9.8e-173       1     478 [.     187     667 ..     187     668 .. 0.99

  Alignments for each domain:
  == domain 1  score: 575.6 bits;  conditional E-value: 1.1e-176
        APG9   1 wkwanvenLDaFlqevYeYyqgkGllcivlsrvlelltlvfvvvfstfLllcvdysklleeksekvslsdvivekcvsklslltllllvlfllywvlkl 99 
                 w+wanvenLD Flq+vY++y+gkG+ c++++r++++lt+ fv+ f+tf+++c+d+s++      + sl +++ ++c++++s l +l+l+lf+ +++   
  EPX72476.1 187 WRWANVENLDYFLQQVYSFYVGKGFSCMIVQRLFQILTISFVIGFTTFITSCIDWSAV----IPHGSLVNATKSHCIAQMSPLDTLFLWLFMSFLCALW 281
                 89********************************************************....6799********************************* PP

        APG9 100 lkflldlrrlleirsfytelLkisdedlqtisWqevverlvelqkenaltakkk.........eldaldianrimRkeNYliAlinkdiLdltlplPll 189
                 + +l+d++rl++ir+f+ ++Lkis++d+ t+sWq+++ rl +l++ nalta++          +lda+ i nrimRkeNY+iAlin+d++dl+l  Pll
  EPX72476.1 282 IYYLTDIPRLWHIREFFIHALKISSTDMATVSWQRILYRLYKLKNVNALTAEDGrvvslhnmkRLDAQAITNRIMRKENYFIALINNDVIDLEL--PLL 378
                 **************************************************88879999***********************************9..999 PP

        APG9 190 gerqlltktlewnlelcllnflFdekgqlreeflkekkrkelaeeLrkrfllagvlnlllaPfiviylllyfffryaeelkknpsslgsRrwsplAewk 288
                 ++r +lt+t ewn+++c++nf+Fd++gq+ e+f + ++rk+laeeLr+rf++ag+ln+l++P++++yll++ ffry+ e++knps lg Rr++plA w+
  EPX72476.1 379 RKR-ILTHTTEWNINWCIFNFVFDDQGQILETFRNVNSRKRLAEELRRRFIVAGFLNCLCSPIVAVYLLVHNFFRYFDEFHKNPSLLGIRRYTPLALWT 476
                 999.*********************************************************************************************** PP

        APG9 289 lRefNELpHlfeaRlnrsyklAskYldqfpseklaiiakfvafvagsiaavlvvlslldeelllefei.egrtvlfyltvlgvilavarslipeenevf 386
                 +Re+NELpH+f++R+++sy++As+Y++qfp  ++   +k v+f++gs++avlv+++l+d+e+ ++fe+ ++rtv+fyl+++g+++a +rslip+e+ +f
  EPX72476.1 477 FREYNELPHVFDERISNSYEYASHYVSQFPDFNVIRCVKYVSFILGSFTAVLVIITLFDPEITMTFELtKDRTVIFYLGIFGSLIAAMRSLIPDETLIF 575
                 *************************************************************************************************** PP

        APG9 387 dpeallrevlehtHYlpdeWkgklhteevkkefselfqlkivilleellsvlltPfiLlfslpksaeeivdffreftvevdgvGdvcsfAvf 478
                 dpe++lr+v+ +tHYlp+ W+ ++ ++++++ef++l++++iv +l e+l +lltP++L+f++p +++eivdffre+tv+v+gvG+vcs+Avf
  EPX72476.1 576 DPEKALRKVAYFTHYLPEWWQRNMDSKSIQQEFCTLYTYRIVNVLWEILGILLTPVLLFFTFPACSQEIVDFFREHTVHVEGVGYVCSHAVF 667
                 *******************************************************************************************9 PP

>> POB3_N  POB3-like N-terminal PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   3.6e-05      0.32      35      84 ..     302     356 ..     299     365 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 3.6e-05
      POB3_N  35 vqikasdissaqWvrva.rgyqLrill....kdgkvvrfdGFkeedfdkLskllk 84 
                 ++i+++d+++++W+r+  r y+L+        dg+vv++  +k+ d + +++ + 
  EPX72476.1 302 LKISSTDMATVSWQRILyRLYKLKNVNaltaEDGRVVSLHNMKRLDAQAITNRIM 356
                 689*************99*****966557768**************999988764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (718 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       599  (0.0334096); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.28s 00:00:00.91 Elapsed: 00:00:00.45
# Mc/sec: 4791.69
//
Query:       EPX72477.1  [L=149]
Description: NatC N-acetyltransferase complex catalytic subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.3e-19   69.7   0.1    2.9e-19   69.4   0.1    1.1  1  Acetyltransf_1   Acetyltransferase (GNAT) family
    1.3e-11   44.7   0.1    1.8e-11   44.3   0.1    1.2  1  Acetyltransf_7   Acetyltransferase (GNAT) domain
    1.8e-11   44.0   0.1    2.4e-11   43.7   0.1    1.2  1  Acetyltransf_10  Acetyltransferase (GNAT) domain
    5.5e-10   39.1   0.1    7.9e-10   38.6   0.1    1.2  1  FR47             FR47-like protein
    6.3e-06   26.9   0.0    7.1e-06   26.7   0.0    1.1  1  Acetyltransf_3   Acetyltransferase (GNAT) domain
    9.8e-06   25.3   0.0    1.9e-05   24.4   0.0    1.6  1  Acetyltransf_8   Acetyltransferase (GNAT) domain
    3.8e-05   23.8   0.0      7e-05   22.9   0.0    1.3  1  Acetyltransf_9   Acetyltransferase (GNAT) domain
    0.00018   21.7   0.1    0.00022   21.4   0.1    1.2  1  Acetyltransf_4   Acetyltransferase (GNAT) domain
  ------ inclusion threshold ------
      0.014   15.5   1.9      0.021   15.0   0.0    2.1  2  Acetyltransf_CG  GCN5-related N-acetyl-transferase


Domain annotation for each model (and alignments):
>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.4   0.1   1.4e-22   2.9e-19      14     117 .]      25     126 ..      11     126 .. 0.86

  Alignments for each domain:
  == domain 1  score: 69.4 bits;  conditional E-value: 1.4e-22
                     HHHHHHHHHHHHHHHHSTTCEEEEEEETTEEEEEEEEEEEET.TSTTEEEEEEEEESGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTEHH CS
  Acetyltransf_1  14 ppnedaseeefeesfsleaegllvaeedgeliGfisllkipd.ekggvayieslaVspeyrgkGlGsaLlealeerareegikkivlaveednda 107
                     +p+++     ++ + ++ +e+ +va+ dg+ +G +  +++ +     ++yi  laV+ ++rgkG++++L +a +  + e+g+++ivl++e+dnda
      EPX72477.1  25 EPYSKYV---YRYFVHQWPEYSFVALLDGQMVGAVISKQDIHrGQSLRGYIAMLAVKDSHRGKGIATLLTKASLNVMIEKGAQEIVLETEVDNDA 116
                     3333333...5555666899*******************999977899*********************************************** PP

                     HHHHHHHTTE CS
  Acetyltransf_1 108 airlYeklGF 117
                     a+ +Ye+lGF
      EPX72477.1 117 AMYFYERLGF 126
                     *********9 PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.3   0.1   9.1e-15   1.8e-11       5      75 ..      43     127 ..      31     128 .. 0.76

  Alignments for each domain:
  == domain 1  score: 44.3 bits;  conditional E-value: 9.1e-15
                     EEEEEETTEEEEEEEEEEES.......TCTEEEEE-GGGTTSSHHHHHHHH.....TTSEEE.EE.EEEETHHHHHHHHHHTTEE CS
  Acetyltransf_7   5 vfVaeddgkivGfialslld.......aeitrlaVdpeyrgkGiGraLlea.....aekgii.le.qlelnaekaikfYeklGFe 75 
                      fVa  dg+ vG ++ + +        ++i  laV+ ++rgkGi++ L +a     +ekg + ++ ++e+++++a  fYe+lGF 
      EPX72477.1  43 SFVALLDGQMVGAVISKQDIhrgqslrGYIAMLAVKDSHRGKGIATLLTKAslnvmIEKGAQeIVlETEVDNDAAMYFYERLGFC 127
                     58999*******77755555999888888888*****************9866654225633223445554447888*******6 PP

>> Acetyltransf_10  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.7   0.1   1.2e-14   2.4e-11      27     112 ..      37     132 ..      10     137 .. 0.82

  Alignments for each domain:
  == domain 1  score: 43.7 bits;  conditional E-value: 1.2e-14
  Acetyltransf_10  27 eegealllvaeeggkivGvi....elrdgs........hisllfVdpeyrgqGigkaLleaveeeaekdgikl.eltvnasp.yavpfYeklGF 106
                      ++   + +va  +g++vG++                  +i++l+V++++rg+Gi++ L +a ++ + ++g ++  l+ + ++ +a  fYe+lGF
       EPX72477.1  37 HQWPEYSFVALLDGQMVGAViskqD----IhrgqslrgYIAMLAVKDSHRGKGIATLLTKASLNVMIEKGAQEiVLETEVDNdAAMYFYERLGF 126
                      45555678888999****9944333....346668999***************************8888888889999999999********** PP

  Acetyltransf_10 107 kavgee 112
                       + ++ 
       EPX72477.1 127 CRYKRL 132
                      888766 PP

>> FR47  FR47-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.6   0.1     4e-13   7.9e-10      21      80 ..      69     129 ..      51     135 .. 0.86

  Alignments for each domain:
  == domain 1  score: 38.6 bits;  conditional E-value: 4e-13
                 TSSEEEEEE-GGG-SSSHHHHHHHHHHHHHHHS-.S-EEEEEETT-HHHHHHHHHHT-EEE CS
        FR47  21 ggelgalqvlpehrrrGlgsrlvkalakeiaerg.ktvllvvvasNtpsirlyeklGfeki 80 
                  g++ +l v+++hr++G +++l+ka  + ++e+g ++++l +  +N+++  +ye+lGf  +
  EPX72477.1  69 RGYIAMLAVKDSHRGKGIATLLTKASLNVMIEKGaQEIVLETEVDNDAAMYFYERLGFCRY 129
                 49**********************98888888772556777999**************877 PP

>> Acetyltransf_3  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   0.0   3.6e-09   7.1e-06      51     137 ..      39     126 ..       3     127 .. 0.73

  Alignments for each domain:
  == domain 1  score: 26.7 bits;  conditional E-value: 3.6e-09
  Acetyltransf_3  51 eegygwaivlkdtgviGsv.glrdleeedee.aelgymlaps.fwgkGyateavralleyafeelglerlvavidkeNeaSirvleklGf 137
                     + +y ++  l d++++G v + +d+++ +   + + ++  ++ ++gkG+at  ++a l+++ e+  ++++v +++ +N a    +e+lGf
      EPX72477.1  39 WPEYSFVA-LLDGQMVGAViSKQDIHRGQSLrGYIAMLAVKDsHRGKGIATLLTKASLNVMIEKG-AQEIVLETEVDNDAAMYFYERLGF 126
                     34566777.4555599999555666665544666665544555******************7776.***********************9 PP

>> Acetyltransf_8  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.0   9.3e-09   1.9e-05      85     141 ..      74     130 ..      13     133 .. 0.81

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 9.3e-09
                     EES.SHHHCTTTCHHHHHHHHHHHHHCCTT--EEEE--BTT-HHHHHHHHHTT-EEEE CS
  Acetyltransf_8  85 lig.eaeargkglttallralvhylfadprtrrvvvEPdvrNerairllekaGfekek 141
                     +++ + ++rgkg++t l +a ++ ++++ +++ +v+E +v+N +a+ ++e++Gf + k
      EPX72477.1  74 MLAvKDSHRGKGIATLLTKASLNVMIEK-GAQEIVLETEVDNDAAMYFYERLGFCRYK 130
                     44436679***************99998.*************************9877 PP

>> Acetyltransf_9  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.0   3.5e-08     7e-05      72     125 ..      68     126 ..      43     129 .. 0.88

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 3.5e-08
                     EEEEEEEEEE-CCGTTS-HHHHHHHHHHHHHHHTT--EEEE--.....SSHHHHHTTT- CS
  Acetyltransf_9  72 kaagvtgVavapehrgrgvlskLlaraleemreegqplsllfP.....ssipiYrrfGy 125
                       +++++ av+  hrg+g+++ L++++l+ m e+g++ ++l       +++ +Y+r+G+
      EPX72477.1  68 LRGYIAMLAVKDSHRGKGIATLLTKASLNVMIEKGAQEIVLETevdndAAMYFYERLGF 126
                     4589*************************************99999999999******8 PP

>> Acetyltransf_4  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.1   1.1e-07   0.00022      47     135 ..      39     127 ..       6     140 .. 0.84

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 1.1e-07
  Acetyltransf_4  47 ekeyvflvaesdrivGyaylgqfkkrakdwkaelsvylaerdnnkeglgrelidaleqvlkeqnienllaeiaspnensiqfhkalGFe 135
                       ey f ++ ++++vG    +q   r+++  + + ++ ++   + +g++  l +a  +v+ e + ++++ e+ ++n++++ f+++lGF 
      EPX72477.1  39 WPEYSFVALLDGQMVGAVISKQDIHRGQSLRGYIAMLAVKDSHRGKGIATLLTKASLNVMIEKGAQEIVLETEVDNDAAMYFYERLGFC 127
                     4588899999********99987777********99998667888899988999999*******************************5 PP

>> Acetyltransf_CG  GCN5-related N-acetyl-transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.4       1.9   3.8e+03      62      77 ..      26      42 ..      24      45 .. 0.74
   2 ?   15.0   0.0     1e-05     0.021      31      58 ..      76     103 ..      69     110 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 1.9
  Acetyltransf_CG 62 ptCsyvaayl.ekhpey 77
                     p  +yv +y+ ++ pey
       EPX72477.1 26 PYSKYVYRYFvHQWPEY 42
                     67789999885666777 PP

  == domain 2  score: 15.0 bits;  conditional E-value: 1e-05
  Acetyltransf_CG  31 eVpeelrGkGiAkkLvkaalddareegl 58 
                       V++++rGkGiA  L+ka l+ + e+g 
       EPX72477.1  76 AVKDSHRGKGIATLLTKASLNVMIEKGA 103
                      699******************9998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       503  (0.0280551); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.46u 0.30s 00:00:00.76 Elapsed: 00:00:00.46
# Mc/sec: 972.76
//
Query:       EPX72478.1  [L=409]
Description: CobW/HypB/UreG nucleotide binding domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.6e-50  170.0   1.1    4.8e-50  169.6   1.1    1.2  1  cobW         CobW/HypB/UreG, nucleotide-binding domain
     0.0024   17.7   0.0     0.0069   16.3   0.0    1.7  2  CobW_C       Cobalamin synthesis protein cobW C-terminal doma
     0.0054   17.1   0.0      0.011   16.2   0.0    1.4  1  AAA_16       AAA ATPase domain
     0.0072   15.3   0.2        2.4    7.0   0.0    2.9  3  MeaB         Methylmalonyl Co-A mutase-associated GTPase MeaB
     0.0079   16.2   0.1      0.049   13.6   0.0    2.2  3  TsaE         Threonylcarbamoyl adenosine biosynthesis protein
  ------ inclusion threshold ------
      0.013   15.5   0.4        2.9    7.8   0.1    2.4  2  RsgA_GTPase  RsgA GTPase
      0.058   13.1   0.1        1.1    9.0   0.0    2.2  2  AAA_30       AAA domain
       0.14   12.4   0.0       0.32   11.2   0.0    1.6  1  AAA_22       AAA domain


Domain annotation for each model (and alignments):
>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  169.6   1.1   2.2e-53   4.8e-50       1     176 [.      68     251 ..      68     252 .. 0.95

  Alignments for each domain:
  == domain 1  score: 169.6 bits;  conditional E-value: 2.2e-53
                 EEEEEEESTTCCHHHHHHHHHCT--SS-EEEEESS-SS.CHCCCCCCHCCCT......EEEETTTTECCHCTT-HHHHHHHHHHHHTT-SEEEEEECTT CS
        cobW   1 pvtvltGflGsGKTtLlnhllenraglklavivNefge.vsiDaellretgve.....ivelenGciCctlredllkelealeereerldviliEttGl 93 
                 pvt+ltGflG+GKT+Ll+ +len++g+++av++Ne+g+  +++++l++e+g e     +v+l+nGc+Cct+++  +k++e+l+++++++d i+iEttG+
  EPX72478.1  68 PVTILTGFLGAGKTSLLKCILENAQGKRVAVLMNEVGDsGDLERNLMEEAGGEelyeeWVSLSNGCMCCTVKDSGIKAIEQLMKQKGKFDSIVIETTGV 166
                 79***********************************966899999999944447888***************************************** PP

                 TTHHHH..HTT.SHHHHHCCCECEEEEEEETTTH.CCHCCHHHHHHHHHHTSSEEEEE-HHHHCHC..HHHHHHHHHHHHTTS-EE CS
        cobW  94 aePapv..aft.eeelksdltldavvavvDaknleaeeekieekaedqlaaadllvlnKtDlldeeallekleerlrqlnpeakvl 176
                 a+P p+  +f+ ++ l s+++ld+vv+v+D++nl++  ++++e +  q+  ad+lvlnKtD +++++l e++ +++r++np ak++
  EPX72478.1 167 ANPGPLaqTFWlDDALGSEVQLDGVVTVIDCQNLDSILNDSTEIGSIQISHADCLVLNKTDKVNTSEL-ERIYHVVRSINPLAKIC 251
                 ******887779**********************999*****************************87.************99985 PP

>> CobW_C  Cobalamin synthesis protein cobW C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       3.2   7.3e+03      34      60 ..      86     113 ..      84     121 .. 0.70
   2 !   16.3   0.0   3.1e-06    0.0069       1      83 [.     308     403 ..     308     404 .. 0.78

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 3.2
      CobW_C  34 Givwlagkpd.alvlqgvggrlrlepag 60 
                  i++ a+ ++ a++++ vg++ +le+  
  EPX72478.1  86 CILENAQGKRvAVLMNEVGDSGDLERNL 113
                 5666666667799999999988887554 PP

  == domain 2  score: 16.3 bits;  conditional E-value: 3.1e-06
      CobW_C   1 issfvfrarrpfdperleellee.............elpegilRaKGivwlagkpdalvlqgvggrlrlepagawwaa.ededrrseLVfIGrdldk 83 
                 i+s +f+ +r ++ ++ e++l+               +   i+R+K +++ ++   ++v+qgv++++++ p ++  +  +d++ +   V+IG+++d+
  EPX72478.1 308 ITSRTFELPRRMSADEYERWLQWirgilwlcletgeGEEYMIYRSKALLQKDDG-SWHVMQGVREVFEVLPLPRSAKInSDKQLHPVTVLIGKNVDR 403
                 67888999999999888999888777777766443323356********98777.6*************9777665544577777888999*99986 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   4.7e-06     0.011      24      56 ..      65      99 ..      53     125 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 4.7e-06
      AAA_16 24 p..elvllsGesGvGKsslvrellralekdggifl 56
                   ++++l+G  G GK+sl++++l+ ++++++ +l
  EPX72478.1 65 KavPVTILTGFLGAGKTSLLKCILENAQGKRVAVL 99
                256999**********************9987664 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.0   0.0    0.0011       2.4      33      63 ..      71      99 ..      53     108 .. 0.80
   2 ?    1.3   0.0      0.06   1.3e+02     117     133 ..     150     167 ..     128     173 .. 0.82
   3 ?    3.2   0.0     0.016        36     168     195 ..     217     244 ..     183     263 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0011
                EEEE-TTSSHHHHHHHHHHHHHCTT--EEEE CS
        MeaB 33 GltGvPGaGkstlvealglelrrrGkrvavl 63
                 ltG+ GaGk  l++ + ++  ++Gkrvavl
  EPX72478.1 71 ILTGFLGAGKTSLLKCILEN--AQGKRVAVL 99
                48*********999887775..78******8 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.06
                 HHHTT.-SEEEEEEESST CS
        MeaB 117 leaaG.fDvvlietvGvG 133
                 +   G fD ++iet Gv 
  EPX72478.1 150 MKQKGkFDSIVIETTGVA 167
                 4444549*********95 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.016
                 H-SEEEEE---HHHHHHHHHHHHHHHHH CS
        MeaB 168 iaDiivvnkaDkkeaekaarelraalel 195
                  aD +v+nk+Dk ++++ +r ++++ ++
  EPX72478.1 217 HADCLVLNKTDKVNTSELERIYHVVRSI 244
                 48*********99999999998877665 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.0   2.2e-05     0.049      20      46 ..      68      94 ..      48      98 .. 0.79
   2 ?   -1.5   0.0         1   2.4e+03      65      89 ..     214     238 ..     204     245 .. 0.78
   3 ?   -2.9   0.0       2.8   6.2e+03      42      56 ..     302     316 ..     292     323 .. 0.66

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 2.2e-05
                EEEEEEESTTSSHHHHHHHHHHHTT-- CS
        TsaE 20 dvilLeGdLGaGKTtlvrglakalgve 46
                 v +L+G LGaGKT l + ++++ + +
  EPX72478.1 68 PVTILTGFLGAGKTSLLKCILENAQGK 94
                4689****************9987655 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 1
                 SEEEEE-TT-SSTHHHHHCTTCCCC CS
        TsaE  65 glyHfDlYRledeeeleelgleeyl 89 
                 ++ H+D+  l++++++++ +le ++
  EPX72478.1 214 QISHADCLVLNKTDKVNTSELERIY 238
                 4899999999999999888887765 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 2.8
                 HTT------TTTTSE CS
        TsaE  42 algveevkSPTFtlv 56 
                 +  v++++S TF l 
  EPX72478.1 302 ETPVTSITSRTFELP 316
                 344557899999875 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.1    0.0013       2.9     101     125 ..      69      93 ..      50     107 .. 0.84
   2 ?    5.4   0.0    0.0068        15      50      91 ..     220     262 ..     199     271 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0013
                  EEEEECSTTSSHHHHHHHHCTT--- CS
  RsgA_GTPase 101 tsvlvGqSGvGKStLinallpelel 125
                  +++l G  G+GK++L++ +l++++ 
   EPX72478.1  69 VTILTGFLGAGKTSLLKCILENAQG 93 
                  799***************9998654 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.0068
                  EEEEE-GGG--HHHHHHHHHHHHHHTT..SEEEE--TTTHTTHH CS
  RsgA_GTPase  50 vivlnKiDlleeeeeleelkeelealg..yevllvsaktkegle 91 
                   +vlnK+D ++++e le++ + +++++   +++ +s  + ++++
   EPX72478.1 220 CLVLNKTDKVNTSE-LERIYHVVRSINplAKICETSYGRVHDIQ 262
                  69************.***99999999833344444444333333 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.0   0.00049       1.1      20      52 ..      69      99 ..      61     120 .. 0.80
   2 ?    1.7   0.0     0.083   1.9e+02      35     113 ..     143     242 ..     136     250 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00049
      AAA_30 20 vavltGpAGtGKttalkalreaweaaggrvigl 52
                v++ltG  G+GKt +lk + e ++  g+rv++l
  EPX72478.1 69 VTILTGFLGAGKTSLLKCILENAQ--GKRVAVL 99
                799**************9987665..5555554 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.083
      AAA_30  35 lkalreaweaag......grviglAptgkaAkv..Laeelg...........ieastiakllkrlk..grarlepgtllivDEagmvdtkqlaallkaa 112
                 +ka++++++++g       +  g+A  g  A++  L ++lg           i++++++++l+  +  g  +++++++l+   +  v+t++l+++   +
  EPX72478.1 143 IKAIEQLMKQKGkfdsivIETTGVANPGPLAQTfwLDDALGsevqldgvvtvIDCQNLDSILNDSTeiGSIQISHADCLVLNKTDKVNTSELERIYHVV 241
                 7888888888877877777777888888888876666666644445555444599999999988779977999999******99999999999998887 PP

      AAA_30 113 e 113
                 +
  EPX72478.1 242 R 242
                 6 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00014      0.32       7      47 ..      69     100 ..      65     153 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00014
      AAA_22   7 ilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtl 47 
                 ++++tG  G+GKT ll+ +le+++          + v v +
  EPX72478.1  69 VTILTGFLGAGKTSLLKCILENAQ---------GKRVAVLM 100
                 589******************994.........33344444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (409 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       638  (0.0355848); expected 358.6 (0.02)
Passed bias filter:                      587  (0.0327403); expected 358.6 (0.02)
Passed Vit filter:                        67  (0.00373696); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 2907.20
//
Query:       EPX72479.1  [L=450]
Description: UDP-N-acetylglucosamine-dolichyl-phosphateN-acetylglucosaminephosphotransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      6e-34  117.3  11.5      6e-34  117.3  11.5    1.8  2  Glycos_transf_4  Glycosyl transferase family 4


Domain annotation for each model (and alignments):
>> Glycos_transf_4  Glycosyl transferase family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1      0.34     6e+03      57      57 ..      73      73 ..       9      93 .. 0.57
   2 !  117.3  11.5   3.3e-38     6e-34       2     159 ..     133     308 ..     132     309 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 0.34
  Glycos_transf_4 57 v 57
                     +
       EPX72479.1 73 G 73
                     1 PP

  == domain 2  score: 117.3 bits;  conditional E-value: 3.3e-38
  Glycos_transf_4   2 llllltillilllGflDDvlglkarlKlilqilaalililtld.......lslttlglllt.qvlielglilavlltllvivgvtNavNliDGl 87 
                      l+++++il i+llG++DD++++++r+K++l ++aa++l+++++       +s++tl  +++   +++lg +++++++ ++i++  N++N+i+G+
       EPX72479.1 133 LSAVISILSISLLGIFDDLFDIRWRHKFFLPAIAAIPLLVVYYvdygvtyVSVPTLLRPFFqRSIVDLGFLYYIYMAAVAIFCP-NSINIIAGV 225
                      5788999**********************************9999888886776666555546899******************.********* PP

  Glycos_transf_4  88 dGlaagvsiiialalvvla...........avdgrsellllalallgallGfllfNrypAkvFmGDsgslflGlvlavlailg 159
                      +G++ag+s++i+l++++             av+ +  +++l+l llg+++G+l +N+ p++vF+GD++ +f+G+vlav+ ilg
       EPX72479.1 226 NGVEAGQSLVIGLVVLCNDliyvfhpsnpeAVRAHLLSIYLILPLLGVTAGLLKYNWWPSRVFVGDTFCYFAGMVLAVVGILG 308
                      ***********9988776677788888888666777777777899999999****************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (450 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       476  (0.0265492); expected 358.6 (0.02)
Passed bias filter:                      253  (0.0141112); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 3174.41
//
Query:       EPX72480.1  [L=803]
Description: hira protein Slm9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.6e-68  228.7   0.0    4.8e-67  225.9   0.0    2.4  3  Hira         TUP1-like enhancer of split
    6.5e-11   42.6  10.4      6e-05   23.7   0.1    5.8  7  WD40         WD domain, G-beta repeat
    0.00056   20.2   0.0        5.3    7.4   0.0    4.4  5  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain


Domain annotation for each model (and alignments):
>> Hira  TUP1-like enhancer of split
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       1.2   6.9e+03      45      96 ..      44      92 ..      43      95 .. 0.74
   2 ?   -1.4   0.0      0.26   1.6e+03      66      98 ..     242     274 ..     197     277 .. 0.78
   3 !  225.9   0.0     8e-71   4.8e-67       1     222 []     526     740 ..     526     740 .. 0.97

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 1.2
        Hira 45 lppvslapllssssrssekeltrapavtsasltsnGvpivtlsngdgylydk 96
                ++++s+++l +++   +   l+ +  vt +++++ G+ +   ++  ++ly++
  EPX72480.1 44 FSNESVTALTEECFSAK---LQFSAPVTCVRFSKDGRLLGIATEDGTFLYEE 92
                66777777777766544...56788899999999999888888888888876 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.26
        Hira  66 trapavtsasltsnGvpivtlsngdgylydksl 98 
                  ++ +++ ++  ++G+ ++ + ++d+ ++d sl
  EPX72480.1 242 PDGAHIAAVNAINEGINVIAIVQRDSWTFDISL 274
                 56778888899999***************9876 PP

  == domain 3  score: 225.9 bits;  conditional E-value: 8e-71
        Hira   1 GrrllPplvlespasfLessgsyLlavtsvgllyvWnvkkkkvllppvslapllssssrssekeltrapavtsasltsnGvpivtlsngdgylydkslk 99 
                 Gr l Pp+v++s+++fLe++++yL++v s+glly W+v + k++++pvs+ pll+++ ++s  + +++p++++ ++t++G pi ++s+g++++y++  +
  EPX72480.1 526 GRLLSPPIVIGSTPCFLECCETYLCCVASNGLLYTWDVISSKAVHNPVSMLPLLHANFTNS--KVAKGPSLEQLFVTDEGNPIAVMSDGNAFAYSPITS 622
                 999****************************************************987765..479********************************* PP

        Hira 100 tWlrvsdswwalgsqywdsrdsstsssassasgilsalerktneevlrkgrakllqrlaktllekegfenleesvtlahlEnrlaaallLgsadEfkkw 198
                 +Wlrvs+ ww++gsqyw s+ ++++++     + ls+ler t ee+ ++gr+++lqr++k+ + ++g++n+e +v+++hlEnrl+++++L+ + +f++ 
  EPX72480.1 623 SWLRVSEGWWMIGSQYWGSLVTDSREE-----SALSFLERCTDEEIIKAGRGRFLQRIVKASMLRQGYDNYEMVVSIRHLENRLMSSEKLNLQFDFHEN 716
                 **********************99876.....69***************************************************************** PP

        Hira 199 llaYakrLaeeglesrlrelckeL 222
                 ll++a+r+aeeg++++++elc+eL
  EPX72480.1 717 LLLFANRIAEEGMKDKMDELCREL 740
                 **********************98 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.0   0.00046       2.8      12      33 ..      66      87 ..      56      89 .. 0.79
   2 ?   -2.9   0.0       2.5   1.5e+04      16      28 ..     109     121 ..     104     125 .. 0.85
   3 !   23.7   0.1     1e-08     6e-05       3      37 ..     176     211 ..     174     212 .. 0.88
   4 ?    1.9   0.0      0.08   4.8e+02      15      27 ..     237     249 ..     223     252 .. 0.85
   5 !    9.9   0.1   0.00024       1.4       6      38 .]     273     313 ..     268     313 .. 0.61
   6 ?   -2.8   0.1       2.4   1.4e+04      16      35 ..     334     353 ..     331     354 .. 0.57
   7 ?   -3.1   0.0         3   1.8e+04      24      37 ..     510     522 ..     507     523 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00046
                SEEEEEEETTSSEE.EEEETTSE CS
        WD40 12 svtslafspdgawl.asGsdDgt 33
                +vt+++fs+dg++l + +++Dgt
  EPX72480.1 66 PVTCVRFSKDGRLLgI-ATEDGT 87
                4************833.477998 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2.5
                 EEEETTSSEEEEE CS
        WD40  16 lafspdgawlasG 28 
                 l++s+  ++la++
  EPX72480.1 109 LCWSQQANLLATA 121
                 89*******9974 PP

  == domain 3  score: 23.7 bits;  conditional E-value: 1e-08
                 EEEEEESS.SSEEEEEEETTSSEEEEE.ETTSEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasG.sdDgtvriW 37 
                 +l++++GH s++++laf+p +++la + s D++++iW
  EPX72480.1 176 LLKVIDGHhSFICGLAFDPLSQYLA-ShSLDRSLKIW 211
                 688999**999************97.7457******* PP

  == domain 4  score: 1.9 bits;  conditional E-value: 0.08
                 EEEEETTSSEEEE CS
        WD40  15 slafspdgawlas 27 
                  l++spdga +a+
  EPX72480.1 237 RLSWSPDGAHIAA 249
                 589******9985 PP

  == domain 5  score: 9.9 bits;  conditional E-value: 0.00024
                 EEESS.SSEEEEE......EETTSSE......EEEEETTSEEEEEE CS
        WD40   6 tltGH.ssvtsla......fspdgaw......lasGsdDgtvriWd 38 
                 +l GH  s  + +      +            +as+  Dg + iW+
  EPX72480.1 273 SLVGHqESLECTSfnpylfT-----QpfqksvIASAAHDGCICIWN 313
                 56788766655552254443.....0444444666656*******8 PP

  == domain 6  score: -2.8 bits;  conditional E-value: 2.4
                 EEEETTSSEEEEE.ETTSEEE CS
        WD40  16 lafspdgawlasG.sdDgtvr 35 
                 +++s +g  l  G s Dg++ 
  EPX72480.1 334 IQWSNSGFELY-GvSLDGHIC 353
                 55555555565.446677775 PP

  == domain 7  score: -3.1 bits;  conditional E-value: 3
                 EEEEEETTSEEEEE CS
        WD40  24 wlasGsdDgtvriW 37 
                 w a+G++D +++++
  EPX72480.1 510 W-AAGTEDASIYVF 522
                 5.67999*999986 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0   0.00088       5.3      39      61 ..      65      87 ..      54      93 .. 0.89
   2 !    4.9   0.0    0.0055        33      28      66 ..      93     131 ..      88     159 .. 0.76
   3 ?    1.7   0.0     0.055   3.3e+02      42      58 ..     236     252 ..     185     271 .. 0.73
   4 ?   -1.9   0.0      0.73   4.4e+03      43      69 ..     333     359 ..     298     367 .. 0.75
   5 ?   -3.8   0.0       2.7   1.6e+04      51      75 ..     547     571 ..     545     572 .. 0.86

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.00088
  ANAPC4_WD40 39 sevrsLaWkpdgklLavaysdge 61
                   v+++++++dg+lL +a++dg+
   EPX72480.1 65 APVTCVRFSKDGRLLGIATEDGT 87
                 689******************97 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.0055
  ANAPC4_WD40  28 rvwtleedkedsevrsLaWkpdgklLavaysdgevrlld 66 
                  ++w+l+ ++  +   +L+W+++ +lLa a++  ++ l +
   EPX72480.1  93 EIWDLPLQTIPGPAYELCWSQQANLLATAWKSISIYLRK 131
                  6777777777788889***********999987777654 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.055
  ANAPC4_WD40  42 rsLaWkpdgklLavays 58 
                    L+W+pdg  +a + +
   EPX72480.1 236 LRLSWSPDGAHIAAVNA 252
                  479******98876544 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 0.73
  ANAPC4_WD40  43 sLaWkpdgklLavaysdgevrlldaes 69 
                  +++W+++g  L  +  dg++ ll  e+
   EPX72480.1 333 DIQWSNSGFELYGVSLDGHICLLRFEE 359
                  467888877777777778777777665 PP

  == domain 5  score: -3.8 bits;  conditional E-value: 2.7
  ANAPC4_WD40  51 klLavaysdgevrlldaesgkvvhs 75 
                  + L+ + s+g +   d+ s k vh+
   EPX72480.1 547 TYLCCVASNGLLYTWDVISSKAVHN 571
                  5789999999999999999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (803 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       752  (0.0419432); expected 358.6 (0.02)
Passed bias filter:                      569  (0.0317363); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.71u 0.28s 00:00:00.99 Elapsed: 00:00:00.44
# Mc/sec: 5461.26
//
Query:       EPX72481.1  [L=568]
Description: transcription factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.2e-09   35.8  10.9    1.3e-08   34.9  10.9    1.4  1  Zn_clus   Fungal Zn(2)-Cys(6) binuclear cluster domain


Domain annotation for each model (and alignments):
>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.9  10.9     7e-13   1.3e-08       1      36 [.     209     244 ..     209     247 .. 0.92

  Alignments for each domain:
  == domain 1  score: 34.9 bits;  conditional E-value: 7e-13
                 SS-HHHHHCT---STSSSS-HHHHHCTHHHCCCCTC CS
     Zn_clus   1 haCdnCrkkKvKCdakkPaCsnCkklnleCtfyses 36 
                 ++C +Crk+++KCd++kP+C nC+k+  +C+ y+ +
  EPX72481.1 209 TGCLTCRKRRIKCDERKPVCYNCIKSKRQCEGYTHF 244
                 58*****************************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (568 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       614  (0.0342462); expected 358.6 (0.02)
Passed bias filter:                      283  (0.0157845); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.44
# Mc/sec: 3850.58
//
Query:       EPX72482.1  [L=636]
Description: kinesin-like protein Klp9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.4e-70  236.2   0.3    1.1e-69  234.9   0.0    1.7  2  Kinesin          Kinesin motor domain
    5.4e-11   42.6   0.0    1.6e-08   34.6   0.0    2.9  3  Microtub_bd      Microtubule binding
  ------ inclusion threshold ------
      0.088   12.9   3.2       0.44   10.6   0.2    2.4  2  DnaGprimase_HBD  DnaG-primase C-terminal, helicase-binding do
        1.6    9.0   6.3        1.9    8.7   4.4    2.2  1  DUF5446          Family of unknown function (DUF5446)
        3.1    8.2   9.5        2.9    8.3   1.4    3.1  3  Csm1_N           Csm1 N-terminal domain
        6.2    5.2   5.1        0.9    8.0   1.3    1.4  2  FUSC             Fusaric acid resistance protein family


Domain annotation for each model (and alignments):
>> Kinesin  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  234.9   0.0   3.8e-73   1.1e-69      26     333 .]      40     395 ..       9     395 .. 0.90
   2 ?   -2.3   0.4      0.55   1.7e+03     174     193 ..     496     515 ..     438     572 .. 0.63

  Alignments for each domain:
  == domain 1  score: 234.9 bits;  conditional E-value: 3.8e-73
                 CEEEEEEEEECTTSCEEEEESEEEETTS-HHHHHHHHHHHHHHH.HHTTSEEEEEEEESTTSSHHHHHTBCTTTSBSHHHHHHHHHHHHHHHCTTTH.. CS
     Kinesin  26 eeekkskkenkeeeekkfkFdkvfdeeatqeevyeetakplves.vleGynatifaYGqtgsGKTyTmegkeeeeeGiipraleelFesikkekeek.. 121
                 +e+++  + +k+++++k +F kvf+++++q +v+ ++ +pl+++ +++   a++f+ G++g+GKTyT+ g  ++++G+++ al+ lF +i+ ++++   
  EPX72482.1  40 PEDSHAFRVSKSKTSEKTSFSKVFSPTCSQWDVFASICAPLLSQsLFHMNDALLFTLGVSGAGKTYTLFGP-QSHPGVVYLALDALFYNIRGREASFpv 137
                 445555566777888899**********************9866156666799*****************8.999***************9988766** PP

                 ..............................................EEEEEEEEEEEEEETTEEEETTSTTT.TSTSSEBEEEECTTSCCEEETTS--E CS
     Kinesin 122 ..............................................ekefsvkvsylEiYneeiyDLLeskk.skkkkklkiredskkgevyvkgltev 173
                                                               + ++ + + + EiYn++i+DLLe+ +   +++ l+++++s++ +  v+g+++v
  EPX72482.1 138 veslrskldkskvlegskylkhdsphpiqlpppdayaslfpqkpdpSFQYAIYLCFPEIYNDRIFDLLEKPSfFGHRHALSLKKSSSSDKKSVAGIQKV 236
                 ********************************************999999********************998455667899998888889******** PP

                 EESSHHHHHHHHHHHHHHHTSTTSSCTSHHCCSEEEEEEEEEEEETTTTTCEEEEEEEEEEEEEEECCCHHHHSSTCHHHHHHHHHHHHHHHHHHHHHH CS
     Kinesin 174 evksaeevlellekgeknrkvaetklneeSSRSHavftitleqknlkeeteekvkisklnLvDLAGsErasktgaaegerlkEaaniNkSLlaLgrvis 272
                  + + +e+++l++k  + rk  +tk+n+ SSRSH v++i+l + ++++   +++++++l LvDLAGsEr++++++ +g  l+E+a+iNkSLl+Lg++++
  EPX72482.1 237 FLANPQEAFQLVHKVLQLRKSTSTKANSVSSRSHLVVSIELFRLQSAK---NHIESCQLDLVDLAGSERTRSAET-SGLLLREGASINKSLLTLGQCLE 331
                 *****************************************9998663...35799*************999995.7999******************* PP

                 HHHHT..CCTSTSCGGGSHHHHHTGGG..HSSSSEEEEEEEE-TBGGGHHHHHHHHHHHHHHCTT CS
     Kinesin 273 aLaek..kkskhipYRdSkLTrlLqds..LgGnsktlmivtvspssenleetlstlkfaerakei 333
                 aL++k   ++++ip+R+SkLT+lL +s  L+G++kt+m+v+++p   +++e+ +++++++ a+ei
  EPX72482.1 332 ALRRKhdGRQHIIPFRQSKLTELLFHSghLSGTAKTCMLVNIDPL-GSFDENAQVMRYSANAREI 395
                 ****98889999************77555***************7.77**************997 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.55
                 EESSHHHHHHHHHHHHHHHT CS
     Kinesin 174 evksaeevlellekgeknrk 193
                 +++++ e ++ l++g+k++ 
  EPX72482.1 496 KIEKMGEWVRRLQQGNKEKD 515
                 44444444444444444433 PP

>> Microtub_bd  Microtubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.6   0.0   5.5e-12   1.6e-08      43     122 ..      37     129 ..       1     137 [. 0.74
   2 !    4.8   0.0    0.0081        24     126     149 .]     182     205 ..     172     205 .. 0.87
   3 ?   -3.6   0.0       3.1   9.4e+03      62      81 ..     417     436 ..     399     444 .. 0.56

  Alignments for each domain:
  == domain 1  score: 34.6 bits;  conditional E-value: 5.5e-12
                  T..............TTTEEEE-SEEEECTTHCCCCCCCC.HHHHHHHH.TT--EEEEEEES................ST-HCHHHHHHHHHH CS
  Microtub_bd  43 e...........eekkkkkefsFdrvfeseseqeevfeei.sqlvqsal.dgynvcifaygqTGsGKtyTmegeeeeagmipraveeifetis 122
                              +++k++++ sF +vf+++++q +vf  i + l+  +l +  +  +f++g  G+GKtyT+ g ++++g++  a++++f  i+
   EPX72482.1  37 LvspedshafrvSKSKTSEKTSFSKVFSPTCSQWDVFASIcAPLLSQSLfHMNDALLFTLGVSGAGKTYTLFGPQSHPGVVYLALDALFYNIR 129
                  0334455666666678889999***************99734566555548899999************************999999998776 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.0081
                  SCCCCEEEEEEEEEEESS-EEETT CS
  Microtub_bd 126 ekgwkyeielqfveiynekvqDlL 149
                  + + +y+i+l f eiyn+++ DlL
   EPX72482.1 182 DPSFQYAIYLCFPEIYNDRIFDLL 205
                  57889******************8 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 3.1
                  THCCCCCCCCHHHHHHHHTT CS
  Microtub_bd  62 seqeevfeeisqlvqsaldg 81 
                  s+++++ +e  q+++  l +
   EPX72482.1 417 SQSKSISSEAIQVQNEQLLR 436
                  34444444444444444444 PP

>> DnaGprimase_HBD  DnaG-primase C-terminal, helicase-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.2   0.00015      0.44      19     111 ..     199     290 ..     194     295 .. 0.89
   2 ?    2.2   0.3     0.063   1.9e+02      46     110 ..     437     499 ..     422     510 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00015
                      HHHTTT--GGG-SS-HHHHHHHHTT-TT-HHHHHHHH-TT----T.T-HHH.HHHHHHHHHHHHHHHHHHH.SS--HHHHHHHHHHHHHHHHHH CS
  DnaGprimase_HBD  19 dsvldyidaslfkykkeefelllqgelddpkLlailldeklkaldeealke.eLrlllikyyeqklkeikkekelsfeeksflirkikkkilkL 111
                      d + d+++  +f  ++++++l  + + d+ ++ +i  ++ + a ++ea++  + +l l+k  + k ++++ +++l ++   f ++ +k++i+ +
       EPX72482.1 199 DRIFDLLEKPSFFGHRHALSLKKSSSSDKKSVAGI--QKVFLANPQEAFQLvHKVLQLRKSTSTKANSVSSRSHLVVSIELFRLQSAKNHIESC 290
                      7899****************************998..566667778888852567889*********************************987 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.063
                      T-HHHHHHHH-TT----T.T-HHHHHHHHHHHHHHHHHHHHHH..SS--HHHHHHHHHHHHHHHHH CS
  DnaGprimase_HBD  46 ddpkLlailldeklkaldeealkeeLrlllikyyeqklkeikk.ekelsfeeksflirkikkkilk 110
                      ++ +L+++l d + ++++   l+ ++r  +++ +e++++++++   +  +ee +  i    +ki+k
       EPX72482.1 437 ENDCLRQLLADADAEMVN---LEYQIREQMTREMEERVSQVEQtFLNRMLEETAQGIEYTDQKIEK 499
                      566777777777777766...888888888898898888888744455566666666666666664 PP

>> DUF5446  Family of unknown function (DUF5446)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   4.4   0.00065       1.9      12      56 ..     462     506 ..     461     529 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00065
     DUF5446  12 qlLeeiEeeltevEkelseavneteaekeekeeerldllekElkd 56 
                 q+  e+Ee +++vE+   ++++e +a  +e  ++ ++++ + +  
  EPX72482.1 462 QMTREMEERVSQVEQTFLNRMLEETAQGIEYTDQKIEKMGEWVRR 506
                 7999**********************9999999999988776654 PP

>> Csm1_N  Csm1 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   1.4   0.00096       2.9      24      57 ..     433     466 ..     425     477 .. 0.79
   2 ?    3.7   0.6     0.026        77      28      69 ..     475     516 ..     471     517 .. 0.84
   3 ?    1.8   1.0       0.1     3e+02      32      62 ..     507     537 ..     490     543 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00096
      Csm1_N  24 klvhENsvLsqkletkdqeiesLkeqlaeleekv 57 
                 +l+ EN  L+q l   d e+ +L+ q+ e  ++ 
  EPX72482.1 433 QLLRENDCLRQLLADADAEMVNLEYQIREQMTRE 466
                 799***********************98754443 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.026
      Csm1_N  28 ENsvLsqkletkdqeiesLkeqlaeleekvkeleerrkkqeE 69 
                 E + L++ le   q ie   ++++++ e v++l++ +k++ E
  EPX72482.1 475 EQTFLNRMLEETAQGIEYTDQKIEKMGEWVRRLQQGNKEKDE 516
                 678899999999999999999999999999999988888776 PP

  == domain 3  score: 1.8 bits;  conditional E-value: 0.1
      Csm1_N  32 LsqkletkdqeiesLkeqlaeleekvkelee 62 
                 L+q ++ kd+ i +L+  +++l+e++++ ++
  EPX72482.1 507 LQQGNKEKDECITHLEGIIEQLQEENNDEQK 537
                 7888899999999999999999988877665 PP

>> FUSC  Fusaric acid resistance protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1       0.8   2.4e+03     295     327 ..     304     336 ..     247     354 .. 0.55
   2 ?    8.0   1.3    0.0003       0.9     501     627 ..     448     577 ..     443     589 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 0.8
        FUSC 295 adadtaalllarlaellaelaqllaslraleaa 327
                  +a+t++lll++ a+  ++l+ l + l+al++ 
  EPX72482.1 304 RSAETSGLLLREGASINKSLLTLGQCLEALRRK 336
                 223444555544444444444444444444433 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0003
        FUSC 501 aewlarrllralrrdlaraasrpaaeaesrfesrmldrlaqllprlaaapparrellrdglaalrlg.ravlrLrraleralaaearaaldavlaala. 597
                 a+     l  ++r+++ r ++++  + e++f+ rml+  aq + + +++ ++  e++r+  ++     +++ +L+ + e+ l++e  + ++ +l++ + 
  EPX72482.1 448 ADAEMVNLEYQIREQMTREMEERVSQVEQTFLNRMLEETAQGIEYTDQKIEKMGEWVRRLQQGNKEKdECITHLEGIIEQ-LQEENNDEQKPALQDTSn 545
                 55666678999***********************************988888888888888876655156779*******.*****************9 PP

        FUSC 598 ..frapaaarsarrlrapaaalraldaalaal 627
                   + + ++++s++ +   ++a++++     + 
  EPX72482.1 546 lhYIDNNRRSSRKLHYEDKQAIEEAHNLHTKR 577
                 99999999999999999999999987766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (636 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1463  (0.0815996); expected 358.6 (0.02)
Passed bias filter:                      564  (0.0314574); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.69u 0.31s 00:00:01.00 Elapsed: 00:00:00.45
# Mc/sec: 4234.62
//
Query:       EPX72483.1  [L=239]
Description: ubiquitin conjugating enzyme Ubc1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      6e-46  155.6   0.0      8e-46  155.2   0.0    1.2  1  UQ_con    Ubiquitin-conjugating enzyme
    5.5e-07   29.3   0.1    8.1e-07   28.8   0.1    1.3  1  UBA_3     Fungal ubiquitin-associated domain
     0.0016   18.3   0.0      0.013   15.4   0.0    2.2  2  UBA       UBA/TS-N domain


Domain annotation for each model (and alignments):
>> UQ_con  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  155.2   0.0   1.3e-49     8e-46       1     139 [.      29     167 ..      29     168 .. 0.98

  Alignments for each domain:
  == domain 1  score: 155.2 bits;  conditional E-value: 1.3e-49
                 HHHHHHHHHHHSTTTTEEEEEEETTEECEEEEEEEB.TTSTTTTEEEEEEEE--TTTTTS--EEEESST-SCTTBE.TTSBB-CGGGSTTT--TTSHHH CS
      UQ_con   1 rlqkelkelakkkpsgisaklvddenlfewkvlikgpedtpYeggvFklelefpedYPlkpPkvkfvtkifHPnvd.ksGevcldiLkeekWspaltle 98 
                 r+ kel++++++++ gi++ +v+++++ ++k+++kgp+dt Yegg++++++e+p dYP++pPk+kf tki+HPn++ ++G++cldiLk++ Wsp++t++
  EPX72483.1  29 RIGKELADVRRDTQAGIQVWTVNESDISRLKGMFKGPPDTAYEGGYYTIDVEIPIDYPFRPPKMKFDTKIYHPNISsQTGAICLDILKDQ-WSPVYTVK 126
                 6889************************************************************************************77.******** PP

                 HHHHHHHHHHHS--TTS-SSHHHHHHHHHTHHHHHHHHHHH CS
      UQ_con  99 svllsiqsLlaepnpesplnkeaakllkkdreeykkkvkey 139
                 s+l+s+qsLl +p+p++p ++++a+ + ++++++ k++ke+
  EPX72483.1 127 SALISLQSLLCTPEPSNPQDAQVAQVYIENHDQFIKTAKEW 167
                 *************************************9987 PP

>> UBA_3  Fungal ubiquitin-associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.8   0.1   1.4e-10   8.1e-07       6      44 ..     188     226 ..     182     239 .] 0.83

  Alignments for each domain:
  == domain 1  score: 28.8 bits;  conditional E-value: 1.4e-10
                 ---SHHHHHHHHHHT--HHHHHHHHHHS--SS--SS--H CS
       UBA_3   6 yGidrdlVdefvsqGFekdkvievLkrLgiksldpedne 44 
                  Gid+ +V+ + + GF+++ ++ +L + +iks + +dn 
  EPX72483.1 188 NGIDPKVVQSLQNFGFDQNVIVSALSKENIKSQEDVDNY 226
                 4*******************************9999995 PP

>> UBA  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.12   7.1e+02       2      12 ..      51      61 ..      50      64 .. 0.90
   2 !   15.4   0.0   2.2e-06     0.013       1      24 [.     190     213 ..     190     216 .. 0.92

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.12
                CHHHHHHHHHT CS
         UBA  2 deeaiqrLveM 12
                +e+ i+rL+ M
  EPX72483.1 51 NESDISRLKGM 61
                89*******99 PP

  == domain 2  score: 15.4 bits;  conditional E-value: 2.2e-06
                 TCHHHHHHHHHTTS-HHHHHHHHH CS
         UBA   1 edeeaiqrLveMGFdreevveALr 24 
                 +d++ +q L++ GFd + +v AL+
  EPX72483.1 190 IDPKVVQSLQNFGFDQNVIVSALS 213
                 58899******************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       479  (0.0267165); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.28s 00:00:00.76 Elapsed: 00:00:00.45
# Mc/sec: 1591.89
//
Query:       EPX72484.1  [L=103]
Description: pre-60S shuttling factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1341  (0.074795); expected 358.6 (0.02)
Passed bias filter:                      687  (0.0383178); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.30s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 674.64
//
Query:       EPX72485.1  [L=615]
Description: atypical/ABC1/ABC1-A protein kinase Abc1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-34  118.7   0.0    3.5e-34  117.5   0.0    1.7  1  ABC1      ABC1 family


Domain annotation for each model (and alignments):
>> ABC1  ABC1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.5   0.0     2e-38   3.5e-34       2     119 .]     290     406 ..     289     406 .. 0.98

  Alignments for each domain:
  == domain 1  score: 117.5 bits;  conditional E-value: 2e-38
        ABC1   2 elgkkleeiFaefdeePiAaASiaqVhrAklk.sgeeVavKvqrpgvkkriksDlellkllakllkkflkelrldleelvdefskslleEldferEAkn 99 
                 +lgk+++++F+efd+ P+AaASi+qVhr+kl  +g  Va+Kvq+pgvk++i+sDl++l++l+++ + ++k+l+  le+ ++ ++k+l+ E+d+ rEA  
  EPX72485.1 290 NLGKDWKSLFSEFDKSPMAAASIGQVHRGKLAsNGTLVAIKVQYPGVKNSIDSDLNNLSILLRASRLLPKGLF--LENSIAAARKELALECDYIREADF 386
                 79******************************88***************************************..************************ PP

        ABC1 100 aekfrenfaklkevkvPkvy 119
                  e+f + +++++++k+Pkv+
  EPX72485.1 387 VERFGTLLNHDQRLKIPKVF 406
                 ******************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (615 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       600  (0.0334653); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.26s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 4131.66
//
Query:       EPX72486.1  [L=1166]
Description: cryptic loci regulator Clr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
     0.0025   18.4  17.5       0.05   14.2   0.2    4.6  4  FOXP-CC        FOXP coiled-coil domain
  ------ inclusion threshold ------
      0.046   14.0   5.9        1.9    8.8   2.1    2.7  2  zf-C2H2_8      C2H2-type zinc ribbon


Domain annotation for each model (and alignments):
>> FOXP-CC  FOXP coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       1.1   9.7e+03      21      60 ..     410     450 ..     404     453 .. 0.47
   2 ?   -0.6   0.2      0.23   2.1e+03      25      46 ..     885     906 ..     873     916 .. 0.77
   3 !    9.5   5.3   0.00017       1.5       5      53 ..     923     973 ..     920     987 .. 0.80
   4 !   14.2   0.2   5.5e-06      0.05       5      32 ..     987    1014 ..     984    1020 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.1
     FOXP-CC  21 eflkhln.seHalddkstaqlrvqmqvvqqlekqlvkEker 60 
                 +flkh + ++  +++k + +  +++ ++++   +  +E++r
  EPX72486.1 410 SFLKHRRfNDEVMENKEIMEKAIKQLNLSASDAERLRERNR 450
                 56666541223334444444444444444444455555555 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.23
     FOXP-CC  25 hlnseHalddkstaqlrvqmqv 46 
                 ++n++H+l++    q +v  ++
  EPX72486.1 885 KINQDHTLTEAPNLQREVETDK 906
                 6899******999999998765 PP

  == domain 3  score: 9.5 bits;  conditional E-value: 0.00017
     FOXP-CC   5 gvCkWPgCekvledveeflkhlnseHald..dkstaqlrvqmqvvqqlekq 53 
                   C+W  Ce+ l++++++  h+++ H+ +  d+st ++r     v+   kq
  EPX72486.1 923 FKCHWASCEATLHSLKTLFIHIKKLHTQSrhDNSTFKCRWSHCSVSLDSKQ 973
                 57************************8642288999999887777665555 PP

  == domain 4  score: 14.2 bits;  conditional E-value: 5.5e-06
     FOXP-CC    5 gvCkWPgCekvledveeflkhlnseHal 32  
                    C  PgC+k +++++ef++hl  +H +
  EPX72486.1  987 HNCSVPGCKKGFSNYQEFQEHLTFSHLP 1014
                  57********************999965 PP

>> zf-C2H2_8  C2H2-type zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   2.1   0.00021       1.9      34      70 ..     921     961 ..     892     972 .. 0.72
   2 ?    6.9   0.7   0.00084       7.5       4      63 ..     957    1014 ..     955    1026 .. 0.71

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00021
   zf-C2H2_8  34 klfrcstascaetfpsmqelvaht.klhyk...pnryfkce 70 
                   f+c  asc  t+ s++ l+ h  klh +    n  fkc 
  EPX72486.1 921 TEFKCHWASCEATLHSLKTLFIHIkKLHTQsrhDNSTFKCR 961
                 579*******************9626887522257889995 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.00084
   zf-C2H2_8    4 sygcrlafpnvrelaqhlrvhlsptqslegklfrcstascaetfpsmqelvahtklhykp 63  
                  ++ cr +  +v    +++ +h++ +  le  + +cs + c + f   qe+  h  + + p
  EPX72486.1  957 TFKCRWSHCSVSLDSKQIDAHIRGH--LEAIQHNCSVPGCKKGFSNYQEFQEHLTFSHLP 1014
                  5667777777777777777777765..567788999999999999888776664443333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1166 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1175  (0.0655363); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.76u 0.29s 00:00:01.05 Elapsed: 00:00:00.48
# Mc/sec: 7341.23
//
Query:       EPX72487.1  [L=161]
Description: peptidyl-tRNA hydrolase Pth1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      1e-29  103.7   0.0    1.2e-29  103.5   0.0    1.0  1  Pept_tRNA_hydro  Peptidyl-tRNA hydrolase


Domain annotation for each model (and alignments):
>> Pept_tRNA_hydro  Peptidyl-tRNA hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.5   0.0   6.7e-34   1.2e-29      39     163 ..      15     149 ..       2     157 .. 0.82

  Alignments for each domain:
  == domain 1  score: 103.5 bits;  conditional E-value: 6.7e-34
                      TTEEEEEEEESS-GGGHHHHHHHHHHHCT--.........GEEEEEEETTSSTTEEEEEESS--TT-HHHHHHHHHHT-S-SEEEEEEE---ST CS
  Pept_tRNA_hydro  39 egekvlllkPqtymNlsGeavkellkfykie...se....eilvvhDdldlplgkirlkkkgssgghnGlksiikklgtekfvRlriGIgrpek 125
                      ++++++l  ++ ymN sG+ + ++ + y  +    e     ++vvhD+l+l+lgk+r++ +gs++ghnG++s+++ lg+e f+R+ +GIgr e+
       EPX72487.1  15 TKDNITLYPSKNYMNDSGKLLGKVQSQYLSSltpMEkakaACIVVHDELELDLGKLRYRIGGSHKGHNGVRSCQAVLGKEGFHRISVGIGRCES 108
                      5678899999**************99776443331245689*************************************************9888 PP

                      .-CGG.HHHHCTSB-HHHHHC..HHHHHHHHHHCHHHHHHHT CS
  Pept_tRNA_hydro 126 .akkk.vadyVLskfskeeek..leevlekaaealeellkee 163
                       ++ + va++VL+k++ +e k   ++v+++  ++l+++l+e+
       EPX72487.1 109 rSS-QeVASFVLGKLKPNEMKvvETKVFDEFSSLLNQILSEK 149
                      445.45**********99966433456788888888888643 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       628  (0.0350271); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 1135.23
//
Query:       EPX72488.1  [L=108]
Description: CENP-S protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.4e-25   88.7   0.1    3.1e-25   88.3   0.1    1.1  1  CENP-S         CENP-S protein
    3.3e-07   30.4   0.0    3.6e-07   30.3   0.0    1.2  1  CENP-T_C       Centromere kinetochore component CENP-T histon
    4.8e-05   23.3   0.0    0.00052   20.0   0.0    2.1  2  Bromo_TP       Bromodomain associated
  ------ inclusion threshold ------
      0.016   15.5   0.0      0.034   14.4   0.0    1.7  1  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a


Domain annotation for each model (and alignments):
>> CENP-S  CENP-S protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.3   0.1     7e-29   3.1e-25       1      76 []       4      85 ..       4      85 .. 0.98

  Alignments for each domain:
  == domain 1  score: 88.3 bits;  conditional E-value: 7e-29
      CENP-S  1 erLKaalwysvgkiveeeaaekeveatkqfi......aaltelvykqlenlakDLeaFakHAkRstittdDvlLlaRrnesL 76
                er+Ka+++++++++++++aae + + ++++i       ++te+v++q++ lakD+e Fa+HA+R+t++++Dv+L++Rrne L
  EPX72488.1  4 ERFKAEIFHVTQQVCNNTAAELRDSESRNVIvdelycVGVTEMVWEQIRVLAKDIEDFAEHAGRKTVQPQDVVLCCRRNEGL 85
                69*****************************9999999*****************************************987 PP

>> CENP-T_C  Centromere kinetochore component CENP-T histone fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.3   0.0     8e-11   3.6e-07      46      79 ..      51      84 ..       9     104 .. 0.76

  Alignments for each domain:
  == domain 1  score: 30.3 bits;  conditional E-value: 8e-11
    CENP-T_C 46 feqvgeDLeayakHagRKtidesDvilLmkrqrk 79
                ++ +++D+e +a+HagRKt++ +Dv+l  +r+  
  EPX72488.1 51 IRVLAKDIEDFAEHAGRKTVQPQDVVLCCRRNEG 84
                344689************************9543 PP

>> Bromo_TP  Bromodomain associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   1.2e-07   0.00052      33      66 ..      44      77 ..      42      81 .. 0.92
   2 ?    0.8   0.0      0.11   4.9e+02      30      46 ..      83      99 ..      83     105 .. 0.82

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 1.2e-07
                HHHHHHHHHHHHHHHHHHHTTSS-SS--HHHHHH CS
    Bromo_TP 33 teiaqkYirelgeqaksfaehagRseptlkDvvl 66
                te++ + ir l+++++ faehagR +++++Dvvl
  EPX72488.1 44 TEMVWEQIRVLAKDIEDFAEHAGRKTVQPQDVVL 77
                78888999************************97 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.11
                HHHHHHHHHHHHHHHHH CS
    Bromo_TP 30 EtLteiaqkYirelgeq 46
                E L e++ +Y re+ ++
  EPX72488.1 83 EGLHEMMNEYQREIIRS 99
                6799******9999765 PP

>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   7.5e-06     0.034      29      64 ..      43      78 ..      25      79 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 7.5e-06
                   HHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHH CS
  CBFD_NFYB_HMF 29 iaecveefieelaseAaeickkekrKtikaehiklA 64
                   ++e+v e i+ la+   + +++++rKt++++++ l+
     EPX72488.1 43 VTEMVWEQIRVLAKDIEDFAEHAGRKTVQPQDVVLC 78
                   678888999999999999**************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       685  (0.0382063); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 775.48
//
Query:       EPX72489.1  [L=1466]
Description: myosin type V [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   7.2e-247  821.0  10.3   1.5e-246  819.9  10.3    1.5  1  Myosin_head      Myosin head (motor domain)
    2.9e-15   56.4   0.2    1.1e-14   54.5   0.2    2.1  1  DIL              DIL domain
    1.3e-12   46.3  15.4     0.0082   15.8   0.7    6.6  6  IQ               IQ calmodulin-binding motif
     0.0029   18.0   0.0      0.065   13.6   0.0    2.6  2  AAA_16           AAA ATPase domain
  ------ inclusion threshold ------
      0.016   15.5   0.0      0.066   13.5   0.0    2.1  1  AAA_22           AAA domain
      0.043   13.9   1.9        5.9    7.0   0.2    2.8  2  IFNGR1           Interferon gamma receptor (IFNGR1)
      0.077   12.7   0.0       0.19   11.4   0.0    1.6  1  Sigma54_activat  Sigma-54 interaction domain
        0.1   12.5   0.9       0.24   11.3   0.9    1.7  1  Myosin_N         Myosin N-terminal SH3-like domain
       0.15   11.3   1.5       0.16   11.2   0.1    1.8  2  DUF2075          Uncharacterized conserved protein (DUF2075)


Domain annotation for each model (and alignments):
>> Myosin_head  Myosin head (motor domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  819.9  10.3  7.3e-250  1.5e-246       3     677 .]      69     738 ..      68     738 .. 0.95

  Alignments for each domain:
  == domain 1  score: 819.9 bits;  conditional E-value: 7.3e-250
                  BGCGSSS-SHHHHHHHHHHHHHTT--EEEETTEEEEE--SS--S.TSSHHHHHHHTTS-GGGSSSSHHHHHHHHHHHHHHHTSEEEEEEESSTTSSHH CS
  Myosin_head   3 dlveLsllneasvlenlkkRykkdliYtysglvlvavnPykklk.iysedvikaykgkkreelpPHifaiadeayrslledkenqsilisGEsGAGKt 99 
                  dl++L++lne+svl++l+ Ry++++iYt+sg+vlv+vnPy+ l  +y+e+vik+y+++++   +PH+++ia   y +l++d+enq+i++sGEsGAGKt
   EPX72489.1  69 DLTTLTYLNEPSVLQALRYRYENQHIYTFSGIVLVSVNPYQLLSeLYNESVIKRYHENQECTKEPHLYSIASACYSALTNDNENQTIIVSGESGAGKT 166
                  899****************************************99***************************************************** PP

                  HHHHHHHHHHHHHSSSSSCTCTTHHHHHHHHHHHHHHHHHEEEESSETTEESSEEEEEEEEETTSSEEEEEEEEECE-GGGGT---TT--SBHHHHHH CS
  Myosin_head 100 eatKkvlqylasvaeskekveeeeleekilqsnPilEafGnAktvrndnssRFGKfieiefdakgkiagakietYLLEksRvvkqakeERnyHiFYql 197
                  +a++++++yl+sv++ ++++++ ++e+++l++nPi+EafGnAktvrndnssRFGK++ i+f++++ i+ga+++tYLLE+sRv     +ERnyHiFYql
   EPX72489.1 167 VAARYIMRYLTSVQALDKTSSKRSVENQVLATNPIMEAFGNAKTVRNDNSSRFGKYVTISFNEEAAITGANVSTYLLERSRVTSSPLGERNYHIFYQL 264
                  ************************************************************************************************** PP

                  HHCSTHHHHHHTT--TCCGSTTTTTTSSSSBTTS-HHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHCTSSEEEECTTSSEEESSHHHHHHHHHH CS
  Myosin_head 198 lagaseeekkelkledvkdyaylsqsgeltvdgiddseefketkkaldilglseeeqkeifrivaailhlGniefkkeakdeqavledeeklekaael 295
                  lag +ee++++++l+++++++ylsq+++++v+g++d++ef++t +al+++g+ e++q+e+++++aa+lhlGni++ ++++++ ++++d+e+l  a+e+
   EPX72489.1 265 LAGCTEEQREKWHLRSPSEFKYLSQGNCMSVEGVNDNDEFTTTASALSTVGILENQQEEVYKLLAALLHLGNIAIVTSRSEA-TIKTDDEHLCYASEI 361
                  *****************************************************************************99885.77778889******* PP

                  HTS-HHHHHHHHHSEEEEETTEEEEEE-BHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS..-S-SEEEEEEEEE-B---SSB-HHHHHHHHHH CS
  Myosin_head 296 lgvdaeelekalvkrriktgkevvskalnveqaevardalakaiyerlFdwlverinkslekkk..eekksfiGvLDiaGFEifeknsFEqlcinyvn 391
                  lgv+++el+k l k+ +kt++e+++++ ++e++ ++rd++ak +y++lF+w+v++in sl+++k  ++ ++ iGv+Di+GFE+fe ns Eq+ciny+n
   EPX72489.1 362 LGVNSSELSKLLSKKMLKTRSETIVTSATYEHVLNTRDSVAKYLYSTLFSWVVHMINASLDHSKvkRSASKHIGVVDIYGFEHFERNSLEQFCINYAN 459
                  *************************************************************9985567789*************************** PP

                  HHHHHHHHHHHCHHHHHHHHHTTSSGCGS-GGGCCHHHHHHHHSSSTSHHHHHHHHHTSTTS-HHHHHHHHHHHH.TTSTTEEETTSTTTTTEEEEEE CS
  Myosin_head 392 EkLqqlFnelvlklEqeeYvrEgiewkfidfgldnqaiidLiekkplGilslLdeecllpkatdetfleklvkaf.skhakfeksrlkkgeakFiikH 488
                  EkLqq Fn++v+klEqeeYvrEg++w  id+  dnq +i Lie+ +lG+lslLdeec+lp++td +fl+kl+++  +kh+ f k++ + ++ +F+ikH
   EPX72489.1 460 EKLQQEFNRHVFKLEQEEYVREGLDWGLIDY-ADNQGCISLIED-NLGVLSLLDEECRLPSGTDGSFLQKLNNQApQKHPLFYKKS-RFSDGSFTIKH 554
                  *******************************.8***********.5****************************99****998887.69********* PP

                  TTCEEEEE-TTHHHHHH----HHHHHHHHTSSSHHHHHHCCSHCHB--.........CSSSECCCCCSBHHHHHHHHHHHHHHHHCTSEEEEEEEE-S CS
  Myosin_head 489 yAgkveYevegfleKnkDtlnedlvellksskkkllaelfkeeekeakaeakksekkkkkkkkkkkfktvgskfkeslaeLmktlestnphfvRCikp 586
                  yA +v+Y++++fl Kn D+l  ++++llkss+++++a l++  ++  + +a   ++ ++kk+ ++k+ +++s+f++sl++Lm+t+++tn+h++RCikp
   EPX72489.1 555 YASDVTYQAHDFLAKNSDSLPVEIINLLKSSDNQFVAYLLDFGTQ--SVDA---QNGATKKRINNKKPSLTSMFRTSLSHLMHTISATNVHYIRCIKP 647
                  ****************************************98554..2223...33333333444668999*************************** PP

                  SSS--TT---HHHHHHHHHHTTHHHHHHHHHHSSSEEEEHHHHHHHHGGGSTTSS-SS.SSSHHHHHHHHHHHT...TS-GCGEEECSSEEEET CS
  Myosin_head 587 nekkkakkldeslvleqlrclGvlegirirraGfpnRitfeefvqrYkllakkelkkllkedakkaveailkel...eldkeeykiGktKiFfr 677
                  ne+k+++++++ lvl+qlr++Gv+e+iri+  Gfp+R  ++ef++r+++l+++     +++d+kk + +i++++   + +++ +++Gk+KiFfr
   EPX72489.1 648 NEEKSSWSFSSPLVLSQLRACGVFETIRISSLGFPKRYFYDEFTKRFRVLVSSRD---WNQDSKKLSLHIISTVlpnTNSADYFQFGKSKIFFR 738
                  **************************************************99985...67799999888888876645567889*********8 PP

>> DIL  DIL domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.5   0.2   5.8e-18   1.1e-14       7     103 ..    1303    1397 ..    1298    1398 .. 0.94

  Alignments for each domain:
  == domain 1  score: 54.5 bits;  conditional E-value: 5.8e-18
                  HHHHHHHHHHHHHHHS-SB-HHHHHHHHHHHHHHHHCCTS-.....-GGGGHHHHHHHHHHHC-S--HHHHHHHC.TT-TSS-HHHHHHHHTTB--T CS
         DIL    7 fyfinaelfNrlllrkklcsrskGlqlrrnlslledWaeeqgleeaaekhlapliqaaqllqlpkssledlesilrstcpaLnsaQlkrllenYrpe 103 
                  ++ i+  +f +l++ +  ++++ G q+++n sll +W++++gl+   +  l pl+q + l +l+k++++d++ il s+c+ L++  + rll +Yrp+
  EPX72489.1 1303 LQDIGENAFSKLINGRASYTWKDGSQISYNTSLLINWCHQKGLS-YSNTSLLPLMQSSLLFSLRKKDEQDFKIIL-SVCNLLSPYEIIRLLDHYRPS 1397
                  566778899**********************************8.789***********************9999.*******************96 PP

>> IQ  IQ calmodulin-binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   0.0   0.00011      0.21       2      21 .]     755     774 ..     754     774 .. 0.93
   2 !    7.8   0.0    0.0016       3.2       4      20 ..     780     796 ..     777     797 .. 0.87
   3 !   15.8   0.7   4.1e-06    0.0082       3      20 ..     804     821 ..     802     822 .. 0.94
   4 !    5.5   0.0    0.0089        18       4      20 ..     828     844 ..     827     845 .. 0.88
   5 ?    2.3   0.4     0.094   1.9e+02      10      21 .]     859     870 ..     858     870 .. 0.88
   6 !    8.7   0.2   0.00084       1.7       2      21 .]     874     893 ..     873     893 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00011
                 HHHHHHHHHHHHHHHHHHHH CS
          IQ   2 kaaikIQaawRGylaRkryk 21 
                 k++ ++Q+++RG   Rk+y+
  EPX72489.1 755 KSVSLLQSFIRGSNSRKKYR 774
                 78999**************8 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0016
                 HHHHHHHHHHHHHHHHH CS
          IQ   4 aikIQaawRGylaRkry 20 
                 ++ IQ+  RG laR  y
  EPX72489.1 780 IVGIQSLSRGKLARDLY 796
                 789***********766 PP

  == domain 3  score: 15.8 bits;  conditional E-value: 4.1e-06
                 HHHHHHHHHHHHHHHHHH CS
          IQ   3 aaikIQaawRGylaRkry 20 
                 aai+IQ  wR y +Rk++
  EPX72489.1 804 AAIVIQNLWRTYAQRKKF 821
                 9***************99 PP

  == domain 4  score: 5.5 bits;  conditional E-value: 0.0089
                 HHHHHHHHHHHHHHHHH CS
          IQ   4 aikIQaawRGylaRkry 20 
                 ++  Qa  RGyl R +y
  EPX72489.1 828 ITSCQAIGRGYLLRINY 844
                 6778**********887 PP

  == domain 5  score: 2.3 bits;  conditional E-value: 0.094
                 HHHHHHHHHHHH CS
          IQ  10 awRGylaRkryk 21 
                  wR+y aR  ++
  EPX72489.1 859 NWRAYHARTTFR 870
                 5*******9886 PP

  == domain 6  score: 8.7 bits;  conditional E-value: 0.00084
                 HHHHHHHHHHHHHHHHHHHH CS
          IQ   2 kaaikIQaawRGylaRkryk 21 
                  ++i +Q+ +R  l+R++++
  EPX72489.1 874 MSIIGFQCLVRSVLTRRYLR 893
                 689**************986 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.0   3.2e-05     0.065      20      50 ..     147     178 ..     132     273 .. 0.77
   2 ?    1.4   0.0      0.19   3.7e+02      53     107 ..     862     926 ..     799    1025 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 3.2e-05
      AAA_16  20 rsgrp.elvllsGesGvGKsslvrellralek 50 
                   + + + +++sGesG GK+  +r ++r+l+ 
  EPX72489.1 147 TNDNEnQTIIVSGESGAGKTVAARYIMRYLTS 178
                 33333589*******************87663 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.19
      AAA_16  53 giflrgkcdqlesa.ipysalaqalareellrqllde.aesaeleawrekleeala........a 107
                 ++ +r+++++++++ i ++ l++   ++++lrql+d+  +s+ l + r+k+++++         a
  EPX72489.1 862 AYHARTTFRKYKMSiIGFQCLVRSVLTRRYLRQLKDKaGKSSILLEKRKKIRKSVDegssllenA 926
                 45567777777666344455666666778999998886566677777777777777333333330 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   3.3e-05     0.066       5      38 ..     152     187 ..     148     215 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 3.3e-05
      AAA_22   5 agilvvtGesGtGKTtllrrlleqldeeakaee..e 38 
                  + ++v GesG+GKT+ +r +++ l+ +++ ++   
  EPX72489.1 152 NQTIIVSGESGAGKTVAARYIMRYLTSVQALDKtsS 187
                 56799****************999988887777642 PP

>> IFNGR1  Interferon gamma receptor (IFNGR1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.1      0.01        20      84     129 ..     100     145 ..      80     149 .. 0.86
   2 ?    7.0   0.2     0.003       5.9      48     123 ..     289     409 ..     280     419 .. 0.71

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.01
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
      IFNGR1  84 yyiKkindlkrkkiilkksleskvksatsetkleskYslitslqpa 129
                  ++ ++n+ + +++  ++s++++++++ + tk  ++Ys+  +++ a
  EPX72489.1 100 IVLVSVNPYQLLSELYNESVIKRYHENQECTKEPHLYSIASACYSA 145
                 5666789999999************************988877766 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.003
                 SEEEEEEEEEETTT--B-----EEEEE-X...............................................XXXXXXXXXXXXXXXXXXXXXXX CS
      IFNGR1  48 envCvsvvgvskvwevrtekskevCvpel...............................................vvslvdiyyiKkindlkrkkiil 99 
                 +  C+sv+gv++++e++t +s    v++l                                               + s+++  + Kk   lk  ++ +
  EPX72489.1 289 QGNCMSVEGVNDNDEFTTTASALSTVGILenqqeevykllaallhlgniaivtsrseatiktddehlcyaseilgvNSSELSKLLSKK--MLKTRSETI 385
                 567**************************99999999999999999999988888887766666666666666663333355555555..555555555 PP

                 XXXXXXXXXXXXXXXXXXXXXXXX CS
      IFNGR1 100 kksleskvksatsetkleskYsli 123
                   s ++    +t ++  + +Ys++
  EPX72489.1 386 VTSATYEHVLNTRDSVAKYLYSTL 409
                 555555555555555555555555 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   9.6e-05      0.19      20      45 ..     150     175 ..     131     203 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 9.6e-05
                      TSSS-EEEECSTTSSHHHHHHHHHHH CS
  Sigma54_activat  20 ktdlsvlitGesGtGKellaraihea 45 
                      + + ++++ GesG+GK++ ar i + 
       EPX72489.1 150 NENQTIIVSGESGAGKTVAARYIMRY 175
                      55689*****************9873 PP

>> Myosin_N  Myosin N-terminal SH3-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.9   0.00012      0.24       2      35 ..      10      48 ..       9      53 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00012
                EEEEETTSTTS-EEEEEE...EEESSE..EEEEETTSEE CS
    Myosin_N  2 klVWVpDpkegyvkGeIk...eeeGdk..vtVetedGkt 35
                + +WV  ++  +  +eI+   +  G+k  +tV+  dG+ 
  EPX72489.1 10 SECWVSNDEGCWDSAEIIdlkDHGGGKcvATVKRGDGEL 48
                78****************774444588999999999985 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1     8e-05      0.16       2      40 ..     153     198 ..     152     228 .. 0.69
   2 ?   -3.5   0.2       2.4   4.7e+03      12      67 ..     899     954 ..     899     972 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 8e-05
     DUF2075   2 avvlVtGvaGtGKtvvllnllael.......eddeeertavylsvN 40 
                 + ++V+G++G+GKtv +  ++  l       +++++++ ++ ++  
  EPX72489.1 153 QTIIVSGESGAGKTVAARYIMRYLtsvqaldKTSSKRSVENQVLAT 198
                 679****************999997655555333344444444444 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 2.4
     DUF2075  12 tGKtvvllnllaeleddeeertavylsvNhplvlvlrealakke.ekkkkkeafekl 67 
                 +GK+ +ll+   ++ +++ ++ + +l    ++v  lr++l++ + + k+ k+ f+++
  EPX72489.1 899 AGKSSILLEKRKKI-RKSVDEGSSLLENATKEVVGLRNKLSEMTkSLKRWKNLFTDP 954
                 79999999999999.666666777777777888889999988775556666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1466 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       782  (0.0436165); expected 358.6 (0.02)
Passed bias filter:                      470  (0.0262145); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.94u 0.31s 00:00:01.25 Elapsed: 00:00:00.48
# Mc/sec: 9219.89
//
Query:       EPX72490.1  [L=492]
Description: telomerase regulator Est1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.2e-17   62.9   7.2    3.2e-17   62.9   7.2    2.1  2  EST1_DNA_bind  Est1 DNA/RNA binding domain
    2.2e-15   57.5   2.6    2.2e-15   57.5   2.6    2.1  2  EST1           Telomerase activating protein Est1


Domain annotation for each model (and alignments):
>> EST1_DNA_bind  Est1 DNA/RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1      0.12   1.1e+03      58     101 ..      76     113 ..      60     157 .. 0.68
   2 !   62.9   7.2   3.6e-21   3.2e-17       1     277 [.     194     444 ..     194     447 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.12
                    HHHT-TT-HHHHHHHHHHHHHTT---HHHHHHHHHHTTHHHHHH CS
  EST1_DNA_bind  58 llfekirkklekgenkqskeskqektpeellkrliilFlrlhgk 101
                    ++f+k++k  +k++  + k       +++ l+r+++   + +++
     EPX72490.1  76 QHFKKCLKLINKKHVVERK------HRKKELTRFLSSCTAFYEN 113
                    4455555555554444433......3444455544444444444 PP

  == domain 2  score: 62.9 bits;  conditional E-value: 3.6e-21
                    HHHHHHHHHHH-TTBHHHHHHHHHHHHHTT-HHHHHHHHHHHHHBSB--TTHHHHHHHHHT-TT-HHHHHHHHHHHHHTT---HHHHHHHHHHTTH CS
  EST1_DNA_bind   1 AlrYYllAaellPsnGepyNQlgviaiysedkldavYyylRSllssnpfptAkeNLellfekirkklekgenkqskeskqektpeellkrliilFl 96 
                    Al+YY+ A++ +P++G++ NQ+gv++   +  + +vY++  +l+s++p ++A  NL+ ++e ++k+  +      +            ++  +lF+
     EPX72490.1 194 ALKYYHFAHKTFPGMGMHCNQMGVVWALKGYTIISVYWFSIALASEIPPKAALVNLLGQLETFYKRAYDNGFCFGS------------ETTALLFV 277
                    89**************************************************************998888888777............22222333 PP

                    HHHHHHHSTTTT....TSSTTGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-S--SXXXXXXXXXXXXXHHHHHHHHHHHHHHHTGG CS
  EST1_DNA_bind  97 rlhgklftgtsf..kdelerevlkklqillseslkernlkdaslllkmllinifaienlkdkssgeeskektllllrlalrfifelfglllekvet 190
                     l   l ++++   +  + r++lk l  ++++s+ ++   ++sl  + l+++ ++i nl++ s  ++ ++    l++ ++  i +l+++ l +   
     EPX72490.1 278 -LSDLLLKQSKNldSYRCSRTTLKSLISQFFNSDISK---SRSLSGHELYCLSSFICNLRNRSIFRSNES----LHKVFIHYIAWLITQTLSCNRN 365
                    .333333333333337888888************998...555777777777777777777776665443....7888999999999999987666 PP

                    GTTT.....-SS-THHHHHHHHHHHHHTT-HHHHHHHHT-HHHHHHHHHHHHHHHH----------------SS--HHHHHTTTBGG CS
  EST1_DNA_bind 191 lealkrdketpsatrvLpalrvylswlksnkslledvekdeklvsslsdllnellssellnksfdvekdpkrdylleEDielkgFsp 277
                      +   + + ++++ +Lp+l++ +  + ++ ++  +++++    ++ls +l e++      + fd + d+++ + l ED++  g+ p
     EPX72490.1 366 IVEH--KTSLSRVNIYLPSLKILVIHILEHLPSCDYIDQRQL--KKLSLSLLEIQP---YFHAFDDPLDKTK-LILLEDYNELGLHP 444
                    6666..7889*************9999999999999998888..999999999999...6666666666544.9999****999987 PP

>> EST1  Telomerase activating protein Est1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.5   2.6   2.5e-19   2.2e-15       5     133 ..      65     182 ..      61     185 .. 0.86
   2 ?   -1.3   0.1      0.34     3e+03      19      52 ..     283     310 ..     278     312 .. 0.81

  Alignments for each domain:
  == domain 1  score: 57.5 bits;  conditional E-value: 2.5e-19
                 HHHHHTHHHHHHHHHHHHHHHH-------H.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-B-..HTT............-.....---------TT CS
        EST1   5 llWrkvyyevikllkkqlknldsapkkkkkpvekrklklklvkflksaigfYqsliqrllsefel..elssvlkvilksktklpekessekseteseee 101
                 l W+ ++y+v + +kk lk ++     kk+ ve+++ k++l +fl s+ +fY+++i++++   ++  +l++vl+  l + t ++ +        + +++
  EPX72490.1  65 LAWTYCHYKVTQHFKKCLKLIN-----KKHVVERKHRKKELTRFLSSCTAFYENCINEIIIG-SCvfQLNPVLQNWLWERTRATLT-------CKTQNY 150
                 57*******************9.....7899****************************988.22355999999776666665444.......455789 PP

                 B--TTSHHH.HHHHHHHHHHHHHHHHHHHHHH CS
        EST1 102 ksslssseqksavlklvhrcLiyLGDlaRYre 133
                  s++s s++  +vl+ +++c iyLGD+aRY +
  EPX72490.1 151 LSPASFSKRYTEVLERIYQCFIYLGDIARYFS 182
                 9999999999********************86 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.34
                 HHHHHHHH-------H.HHHHHHHHHHHHHHHHH CS
        EST1  19 kkqlknldsapkkkkkpvekrklklklvkflksa 52 
                  kq knld      ++++++  lk+  ++f++s 
  EPX72490.1 283 LKQSKNLD------SYRCSRTTLKSLISQFFNSD 310
                 56778888......899*******9999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (492 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       722  (0.04027); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 3465.24
//
Query:       EPX72491.1  [L=363]
Description: Rad23 Rhp23 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.3e-26   90.1  11.3    4.9e-13   48.7   1.2    2.8  3  UBA            UBA/TS-N domain
    1.3e-25   88.8  10.7    2.8e-25   87.8  10.7    1.6  1  XPC-binding    XPC-binding domain
    1.1e-22   79.6   0.8    1.8e-22   78.8   0.8    1.4  1  ubiquitin      Ubiquitin family
    2.9e-08   33.4   1.7      5e-08   32.7   1.7    1.4  1  Rad60-SLD      Ubiquitin-2 like Rad60 SUMO-like
    0.00014   22.0   0.0    0.00034   20.7   0.0    1.7  1  Rad60-SLD_2    Ubiquitin-2 like Rad60 SUMO-like
    0.00018   22.0   0.6    0.00042   20.9   0.1    1.8  2  DUF2407        DUF2407 ubiquitin-like domain
     0.0024   18.4   0.6     0.0095   16.5   0.0    2.1  2  MCM_N          MCM N-terminal domain
     0.0064   16.8   0.8      0.015   15.6   0.3    1.8  2  Ubiquitin_5    Ubiquitin-like domain
  ------ inclusion threshold ------
      0.017   14.9   0.0        4.5    7.2   0.0    2.5  2  UBA_3          Fungal ubiquitin-associated domain
      0.027   13.7  12.2      0.035   13.3  12.2    1.1  1  SOG2           RAM signalling pathway protein
      0.051   13.3   0.0        6.9    6.5   0.0    3.0  3  CUE            CUE domain
      0.066   13.0   0.1        5.4    6.9   0.0    2.4  2  WIYLD          Ubiquitin-binding WIYLD domain
        0.1   12.6   0.3       0.26   11.2   0.3    1.6  1  TBK1_ULD       TANK binding kinase 1 ubiquitin-like domain
       0.11   12.6   0.0         20    5.3   0.0    2.5  2  Rap1_C         TRF2-interacting telomeric protein/Rap1 - C te
       0.39   11.0   3.9       0.21   11.9   0.5    2.5  2  DUF3135        Protein of unknown function (DUF3135)
        3.7    8.1  14.9        5.5    7.5  14.9    1.2  1  SOBP           Sine oculis-binding protein


Domain annotation for each model (and alignments):
>> UBA  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.7   1.2   4.4e-16   4.9e-13       5      37 .]     144     176 ..     140     176 .. 0.96
   2 ?   -3.4   0.1       8.7   9.7e+03       2      10 ..     261     269 ..     260     270 .. 0.81
   3 !   48.2   0.3     6e-16   6.8e-13       1      37 []     316     352 ..     316     352 .. 0.97

  Alignments for each domain:
  == domain 1  score: 48.7 bits;  conditional E-value: 4.4e-16
                 HHHHHHHTTS-HHHHHHHHHHTTTSHHHHHHHH CS
         UBA   5 aiqrLveMGFdreevveALratgnNeErAveyL 37 
                 a++++veMG++r++v++A ra++nN++rAveyL
  EPX72491.1 144 AVENMVEMGYERSQVERAMRAAFNNPDRAVEYL 176
                 79******************************9 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 8.7
                 CHHHHHHHH CS
         UBA   2 deeaiqrLv 10 
                 +++++++++
  EPX72491.1 261 NPQMLETIL 269
                 899999986 PP

  == domain 3  score: 48.2 bits;  conditional E-value: 6e-16
                 TCHHHHHHHHHTTS-HHHHHHHHHHTTTSHHHHHHHH CS
         UBA   1 edeeaiqrLveMGFdreevveALratgnNeErAveyL 37 
                 e+++ai+rL ++GFdr+ v++A+ a+++NeE+A++yL
  EPX72491.1 316 EESQAIDRLSQLGFDRNIVIQAYLACDKNEELAANYL 352
                 689*********************************9 PP

>> XPC-binding  XPC-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.8  10.7   2.5e-28   2.8e-25       1      56 [.     242     297 ..     242     298 .. 0.98

  Alignments for each domain:
  == domain 1  score: 87.8 bits;  conditional E-value: 2.5e-28
  XPC-binding   1 LefLrnnpqFqqlRqlvqqnPqlLqplLqqlaqsnPqllqlIqqnqeeFlqlLnep 56 
                  L fLrn pqFqqlRq+vqqnPq+L+ +Lqq++q +P+l+q+I+qn+e+FlqlL e+
   EPX72491.1 242 LGFLRNIPQFQQLRQIVQQNPQMLETILQQIGQGDPALAQAITQNPEAFLQLLAEG 297
                  78***************************************************997 PP

>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.8   0.8   1.6e-25   1.8e-22       1      70 [.       3      73 ..       3      75 .. 0.97

  Alignments for each domain:
  == domain 1  score: 78.8 bits;  conditional E-value: 1.6e-25
                EEEEETTSEEEEE.EEETTSBHHHHHHHHHHHHTSSGGGEEEEETTEEE-TTSBHGGHTTSTTEEEEEEES CS
   ubiquitin  1 itvktldgkkitl.eveesdtveelKekiaekegipaeqqrLiysGkvLedertleeygiqdgstlhlvlr 70
                +t+k+l+++k+ + +v+++++++elKe+i+ ++ +++e+q+LiysG++L de+t++ey+i++++++++++ 
  EPX72491.1  3 LTFKNLQQQKFVIsDVSSDTKISELKERIQNQQSYEVERQKLIYSGRILADEKTVGEYNIKEQDFIVCMVA 73
                689******************************************************************86 PP

>> Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.7   1.7   4.4e-11     5e-08       1      68 [.       1      68 [.       1      72 [. 0.90

  Alignments for each domain:
  == domain 1  score: 32.7 bits;  conditional E-value: 4.4e-11
                EEEEEEESSS--EEEE.EETTSBHHHHHHHHHHHHT----TT-EEEETTEE--TTSBGGGSS--TTEEE CS
   Rad60-SLD  1 ikiilkgkdgkevkik.VkptttvskLieayrkkkgipeeqkvrLiFDGeeLdpnstvedldiedgdti 68
                ++++ k+ +++++ i+ V+++t++s+L+e+ +++++  + ++++Li+ G+ L +++tv+++ i+++d+i
  EPX72491.1  1 MNLTFKNLQQQKFVISdVSSDTKISELKERIQNQQSYEV-ERQKLIYSGRILADEKTVGEYNIKEQDFI 68
                67888888888766644**********************.***************************98 PP

>> Rad60-SLD_2  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0     3e-07   0.00034      44     102 ..      35      88 ..       8      98 .. 0.76

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 3e-07
                  S--SCCCEEEEETTEEE-TTSBCCCCS-TTTTTTTS-EEEEEEE---SS----.XXXXX CS
  Rad60-SLD_2  44 kpksvndlklilaGkiLennktlkelrlplgevkggvtvmHvvvrenlsekksekkakk 102
                  +  +v+  kli++G+iL + kt++e++++  ++     ++ +v+r++ s+ +s+k    
   EPX72491.1  35 QSYEVERQKLIYSGRILADEKTVGEYNIKEQDF-----IVCMVARPKPSSSTSQKSTPT 88 
                  45667788******************8888888.....777788888777777766333 PP

>> DUF2407  DUF2407 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.1   3.7e-07   0.00042      18      72 ..      15      81 ..       6     112 .. 0.72
   2 ?   -2.6   0.0       7.3   8.2e+03      73      81 ..     192     200 ..     157     212 .. 0.58

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 3.7e-07
     DUF2407 18 ipdpnt.ttvagLkqliRerlpaelasrrLrLIyaGrlLedttslasslklpees.............v 72
                i+d+++ t +++Lk+ i ++   +++ +r +LIy+Gr+L+d++++ +   ++++              +
  EPX72491.1 15 ISDVSSdTKISELKERIQNQQ--SYEVERQKLIYSGRILADEKTVGEYNIKEQDFivcmvarpkpsssT 81
                777777699********9998..88889999***********999875444434456665544333321 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 7.3
     DUF2407  73 sdkaekske 81 
                 +++a  +++
  EPX72491.1 192 QAAAAAEQQ 200
                 111111111 PP

>> MCM_N  MCM N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1       2.7     3e+03      58      87 ..     166     195 ..     155     208 .. 0.66
   2 !   16.5   0.0   8.5e-06    0.0095      26      70 ..     252     296 ..     244     299 .. 0.95

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 2.7
       MCM_N  58 lenpkeylplleealkevvkklepsykdda 87 
                  +np + +++l  ++ e + + + +++ +a
  EPX72491.1 166 FNNPDRAVEYLLTGIPENILSSQAQEQAAA 195
                 588999999998888888866655555442 PP

  == domain 2  score: 16.5 bits;  conditional E-value: 8.5e-06
       MCM_N  26 dqlqemaerekttLevdlddLaafdeeLaeailenpkeylpllee 70 
                 +ql+++ +++ + Le  l+ + + d+ La+ai++np+ +l+ll e
  EPX72491.1 252 QQLRQIVQQNPQMLETILQQIGQGDPALAQAITQNPEAFLQLLAE 296
                 79***************************************9987 PP

>> Ubiquitin_5  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.3   1.3e-05     0.015      39      87 ..      19      67 ..       4      77 .. 0.81
   2 ?   -2.1   0.0       4.4   4.9e+03      27      44 ..     256     273 ..     248     288 .. 0.65

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 1.3e-05
  Ubiquitin_5 39 kLdvtgkelvskiaeefglkensiKlilngklleldktLeeQgvknnsk 87
                   d + +el ++i ++ +++ ++ Kli++g++l  +kt  e ++k++  
   EPX72491.1 19 SSDTKISELKERIQNQQSYEVERQKLIYSGRILADEKTVGEYNIKEQDF 67
                 55677899*****999999889**********************98754 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 4.4
  Ubiquitin_5  27 etkeekkklletkLdvtg 44 
                  + +++++++let L+  g
   EPX72491.1 256 QIVQQNPQMLETILQQIG 273
                  445567888888776554 PP

>> UBA_3  Fungal ubiquitin-associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.019        21      12      31 ..     144     163 ..     135     164 .. 0.85
   2 ?    7.2   0.0     0.004       4.5      11      29 ..     319     337 ..     317     340 .. 0.90

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.019
                 HHHHHHHHT--HHHHHHHHH CS
       UBA_3  12 lVdefvsqGFekdkvievLk 31 
                 +V+++v +G+e+ +v  +++
  EPX72491.1 144 AVENMVEMGYERSQVERAMR 163
                 69**********99977766 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.004
                 HHHHHHHHHT--HHHHHHH CS
       UBA_3  11 dlVdefvsqGFekdkviev 29 
                  ++d +   GF+++ vi++
  EPX72491.1 319 QAIDRLSQLGFDRNIVIQA 337
                 6899*************98 PP

>> SOG2  RAM signalling pathway protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3  12.2   3.1e-05     0.035     241     393 ..      69     278 ..       5     298 .. 0.62

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 3.1e-05
        SOG2 241 l..........srsrrssssgnsaspaangaqsetsersasssgvqssasstPlgegstsp......pgalsrqslsttgststltsssksrs...... 317
                 +          s+s++s+++ +++s +a +a+s+t++++++s + ++ +ss+P  + s +p       + ++r++++++  +          +      
  EPX72491.1  69 VcmvarpkpssSTSQKSTPTATTTSTPAPAATSTTPQQATESPAPTTAPSSVPAADVSATPldsnllAVGAQRNVAVENMVE----------Mgyersq 157
                 1444334443366666777777777777777777777666666677777778888888877666553233334433333222..........1333334 PP

        SOG2 318 ............................ssrsntnasastprslattpa......ppasaesf....astltasrintlaa.......vDeqlletlet 371
                                             ss+++++a+a + + ++++pa       pas++ f    a ++++ ++ +++a            +++l++
  EPX72491.1 158 veramraafnnpdraveylltgipenilSSQAQEQAAAAAEQQQQQQPAsgapsaSPASGNLFeqaaAMSNEEEQPAPNTAgdplgflRNIPQFQQLRQ 256
                 4466999999999**************955555555555555555555555544446667666887533333555555555467776544448****** PP

        SOG2 372 avklalvvysqlteeiskvaea 393
                 +v++ +++++ + ++i +   a
  EPX72491.1 257 IVQQNPQMLETILQQIGQGDPA 278
                 ***********99999886664 PP

>> CUE  CUE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.0    0.0061       6.9      16      41 ..     154     179 ..     152     179 .. 0.92
   2 ?   -3.4   0.0       7.8   8.7e+03      33      40 ..     319     326 ..     319     327 .. 0.78
   3 ?    3.2   0.0     0.066        74      15      40 ..     329     354 ..     328     354 .. 0.88

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0061
                 -HHHHHHHHHHCTTTHHHHHHHHHHC CS
         CUE  16 deevIravLrasngnvEatinaLLeg 41 
                 ++++++++ ra  +n ++++++LL g
  EPX72491.1 154 ERSQVERAMRAAFNNPDRAVEYLLTG 179
                 7899********************76 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 7.8
                 HHHHHHHH CS
         CUE  33 atinaLLe 40 
                 ++i++L +
  EPX72491.1 319 QAIDRLSQ 326
                 68999987 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.066
                 S-HHHHHHHHHHCTTTHHHHHHHHHH CS
         CUE  15 ldeevIravLrasngnvEatinaLLe 40 
                 +d+ ++ +++ a + n E++ n+L+e
  EPX72491.1 329 FDRNIVIQAYLACDKNEELAANYLFE 354
                 67888888888*************97 PP

>> WIYLD  Ubiquitin-binding WIYLD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.0    0.0048       5.4      10      28 ..     143     161 ..     138     166 .. 0.87
   2 ?    3.4   0.0     0.058        65      10      23 ..     319     332 ..     316     337 .. 0.85

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0048
       WIYLD  10 aAidamkelGfskeqvrpv 28 
                  A++ m e+G++++qv++ 
  EPX72491.1 143 VAVENMVEMGYERSQVERA 161
                 59**************876 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.058
       WIYLD  10 aAidamkelGfske 23 
                 +Aid++++lGf+++
  EPX72491.1 319 QAIDRLSQLGFDRN 332
                 7**********976 PP

>> TBK1_ULD  TANK binding kinase 1 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.3   0.00023      0.26      20      56 ..      19      55 ..       6      68 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00023
    TBK1_ULD 20 hpyntvaifqeevakqTkiaaekQellfeghrlllep 56
                ++  +++++ e +++q + ++e+Q+l++ g+ l+ e+
  EPX72491.1 19 SSDTKISELKERIQNQQSYEVERQKLIYSGRILADEK 55
                5677899***********************9887655 PP

>> Rap1_C  TRF2-interacting telomeric protein/Rap1 - C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0     0.018        20       2      32 ..     148     186 ..     147     212 .. 0.76
   2 ?    4.7   0.0     0.028        31       2      35 ..     324     357 ..     323     362 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.018
      Rap1_C   2 leslGykdefithaLkatsldppvlanyvl........e 32 
                 + ++Gy+++ + +a++a   +p ++++y+l        +
  EPX72491.1 148 MVEMGYERSQVERAMRAAFNNPDRAVEYLLtgipenilS 186
                 6899***************99999999998555555540 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.028
      Rap1_C   2 leslGykdefithaLkatsldppvlanyvlealk 35 
                 l++lG++++++++a  a+  + +++any+ e+ +
  EPX72491.1 324 LSQLGFDRNIVIQAYLACDKNEELAANYLFEHGH 357
                 789********************99999988866 PP

>> DUF3135  Protein of unknown function (DUF3135)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.2         6   6.7e+03      33      33 ..     187     187 ..     156     204 .. 0.52
   2 ?   11.9   0.5   0.00018      0.21       2      26 ..     248     272 ..     247     296 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 6
     DUF3135  33 s 33 
                 s
  EPX72491.1 187 S 187
                 2 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 0.00018
     DUF3135   2 lpdfdeLvaLakedPealealrqel 26 
                 +p+f++L+++ +++P+ le++ q++
  EPX72491.1 248 IPQFQQLRQIVQQNPQMLETILQQI 272
                 79*******************9996 PP

>> SOBP  Sine oculis-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5  14.9    0.0049       5.5      93     278 ..      74     257 ..      62     283 .. 0.59

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0049
        SOBP  93 spepsksaspsssptssnsskplisvassskllaeksqepaslveaplepkkqrkk..kpglrkpkqvkagsskssetkagllqkqqkalplsaelees 189
                  p+ps+s+s++s+pt +++s+p    +s + + a++s++p +++ +++    +      + l    q++   ++++e+  ++ q  ++a+    ++ + 
  EPX72491.1  74 RPKPSSSTSQKSTPTATTTSTPAPAATSTTPQQATESPAPTTAPSSVPAADVSATPldSNLLAVGAQRNVAVENMVEMGYERSQV-ERAMRAAFNNPDR 171
                 6789999999999998888888888888777777777777777666655433333321222223333333344444444444332.3333333344444 PP

        SOBP 190 svpkpflrpppsiqelqsslpnqslpkiapppkppstlappsngaerppfsplleppksasenppgleepaprgftppigpplppvnev 278
                 +v +  +  p++i ++q + +   +++++ ++  p   ap+ ++a ++ f + ++  ++  +++p+ +   p gf  ++ p + ++ ++
  EPX72491.1 172 AVEYLLTGIPENILSSQAQEQAAAAAEQQQQQ-QPASGAPSASPASGNLFEQAAAMSNEEEQPAPN-TAGDPLGFL-RNIPQFQQLRQI 257
                 47888888888888777766666666666666.566788899999999999987777777777773.334444442.222223333222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (363 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1399  (0.07803); expected 358.6 (0.02)
Passed bias filter:                      613  (0.0341904); expected 358.6 (0.02)
Passed Vit filter:                        78  (0.00435049); expected 17.9 (0.001)
Passed Fwd filter:                        26  (0.00145016); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.64u 0.27s 00:00:00.91 Elapsed: 00:00:00.45
# Mc/sec: 2420.49
//
Query:       EPX72492.1  [L=373]
Description: nucleosome assembly protein Nap2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.3e-83  277.8   3.1    1.1e-82  277.3   3.1    1.2  1  NAP        Nucleosome assembly protein (NAP)
  ------ inclusion threshold ------
      0.038   13.9   0.0      0.089   12.7   0.0    1.5  1  GreA_GreB  Transcription elongation factor, GreA/GreB, C-term
      0.097   12.9   0.2       0.61   10.3   0.0    2.1  2  DUF5442    Family of unknown function (DUF5442)


Domain annotation for each model (and alignments):
>> NAP  Nucleosome assembly protein (NAP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  277.3   3.1   1.8e-86   1.1e-82       2     269 ..      90     338 ..      89     339 .. 0.95

  Alignments for each domain:
  == domain 1  score: 277.3 bits;  conditional E-value: 1.8e-86
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--S.............................--SSSSTTSTTHHHHHHHTSH CS
         NAP   2 rveaLkklqkelskleaefqeevlelekkyaalykplyekrseIingesepteeeveakedekeeeeeeeekeeekeeekkeeakgipeFWltvlknve 100
                 r+ aLk lq++ + ++ e++e++lele+ky++ y pl+ +r+eI++g sep+ ee++++               e  e++ ++  gip+FWlt+l+nv 
  EPX72492.1  90 RIYALKGLQNDSESIQVEYREKMLELERKYEKMYDPLFSRRAEIVQGISEPKPEELDEE--------------FEVFENNGQDLTGIPDFWLTCLQNVY 174
                 99******************************************************333..............23445678899*************** PP

                 HHHTT--HHHHHHHTTEEEEEEEE-------EEEEEEEE-S-SSB--SEEEEEEEE----........----EEEEEE----B-T.T--TTS------- CS
         NAP 101 llaeliqerDepiLkhLkdirveyllskekegFtleFeFdeNpyFtnevLtktyilksevdkedpfiydgpeiekaegckIdWke.gkdvtvktvkkkq 198
                 l+ae+i+ rD  +L+ Lkd+r++  ls+ ++g++leFeF++N+yF+n+vLtkty++k+e +   +f yd     +aeg++I+Wk+ + ++tv++++kkq
  EPX72492.1 175 LVAEMISSRDVAALESLKDVRFSN-LSEGQKGYRLEFEFAPNDYFSNKVLTKTYYYKQELSPTGEFLYD-----RAEGDEIEWKKpDCNLTVEVETKKQ 267
                 ***********************8.7888****************************999777779999.....9*********99************* PP

                 ---...-------------GGGGS--B---------------HHHHHHHHHHHHHHHHHTHHHHHHHHHHT CS
         NAP 199 knkktketrtvtkkvpkeSFFnfFsppkvpeeeeeeeeeeeeleelleadyeigealkdkiiPkAveyFtg 269
                 +nk+tk+tr v+ +vp++SFFnfF pp+v+eee+++e+  e+  el+e dy++ge++kd+iiP Ave F+g
  EPX72492.1 268 RNKRTKQTRLVRSTVPADSFFNFFAPPQVNEEESDSEDGFEDKTELMELDYQLGEIFKDQIIPLAVECFLG 338
                 ********************************9999999******************************99 PP

>> GreA_GreB  Transcription elongation factor, GreA/GreB, C-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   1.5e-05     0.089      43      72 ..     233     262 ..     232     265 .. 0.93

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1.5e-05
                 TSHHHHHHTT--TT-EE---BTTB---EEE CS
   GreA_GreB  43 eSPlGkaLlgkkvGdevevkapsgkikveI 72 
                 +SP G+ L  +++Gde+e+k p+ +++ve+
  EPX72492.1 233 LSPTGEFLYDRAEGDEIEWKKPDCNLTVEV 262
                 69*********************9999998 PP

>> DUF5442  Family of unknown function (DUF5442)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0    0.0001      0.61      62      89 ..     209     238 ..     178     247 .. 0.83
   2 ?   -0.4   0.0      0.21   1.3e+03      43      66 ..     319     343 ..     287     351 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.0001
     DUF5442  62 rfeddpqaylvndtl..nyyykkdliptdp 89 
                  fe  p+ y+ n+ l   yyyk++l+pt +
  EPX72492.1 209 EFEFAPNDYFSNKVLtkTYYYKQELSPTGE 238
                 58999*******977336********9965 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.21
     DUF5442  43 klkeylkdisi.rtvnciikrfedd 66 
                 +l e +kd +i  +v+c +   ed+
  EPX72492.1 319 QLGEIFKDQIIpLAVECFLGNVEDN 343
                 4667777755525788888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (373 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       756  (0.0421663); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 2816.39
//
Query:       EPX72493.1  [L=321]
Description: fibrillarin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   8.1e-104  345.7   0.0     1e-103  345.3   0.0    1.0  1  Fibrillarin      Fibrillarin
    1.4e-07   31.5   0.0    1.9e-07   31.0   0.0    1.1  1  GCD14            tRNA methyltransferase complex GCD14 subunit
  ------ inclusion threshold ------
       0.02   14.5   0.0      0.048   13.3   0.0    1.5  1  Methyltr_RsmB-F  16S rRNA methyltransferase RsmB/F
      0.072   12.8   0.1        0.1   12.3   0.1    1.3  1  PCMT             Protein-L-isoaspartate(D-aspartate) O-methyl
       0.18   10.8   0.0       0.27   10.3   0.0    1.1  1  DREV             DREV methyltransferase
       0.48   10.9   2.6        8.1    6.9   0.0    2.6  2  Secretin_N       Bacterial type II/III secretion system short


Domain annotation for each model (and alignments):
>> Fibrillarin  Fibrillarin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  345.3   0.0  3.4e-107    1e-103       1     224 [.      91     317 ..      91     319 .. 0.99

  Alignments for each domain:
  == domain 1  score: 345.3 bits;  conditional E-value: 3.4e-107
                  EEEECSSTTEEEEETTSSEEEEEE-SSTT--SSSSEEEEETTE.....EEEEE-TTTSHHHHHHHTT-S--S--TTSEEEEESTTTSHHHHHHHHHHT CS
  Fibrillarin   1 veeheklegvyivkekgdarlatknlvpgekvYgEklikveee.....EyRvWnpfrsKlaaailkglkelpikkgskvLYlGaasGttvsHvsDivg 93 
                  ve+h ++ gv+i+++k+d  l+t+nlvpge+vY+Ek+i+v++      EyRvWnpfrsKlaa+il gl++++ik+g+kvLYlGaa Gt+vsHv+D+vg
   EPX72493.1  91 VEPH-RHGGVFIARGKEDL-LVTRNLVPGESVYNEKRISVDSAdgtkvEYRVWNPFRSKLAAGILGGLDNIYIKPGAKVLYLGAANGTSVSHVADVVG 186
                  5788.9***********99.*********************99999**************************************************** PP

                  TTSEEEEEESSHHHHHHHHHHHTTSTTEEEEES-TTSGGGGTTTS--EEEEEEESSSTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHHSSSSHHHHHH CS
  Fibrillarin  94 eegvvyavefsprvlrelievakkRknivPileDArkPekYralvekvDvifaDvaqpdqarilaknaklflkeggyllisikarsidvtkepeevfk 191
                  +eg+vyavefs+r++r+l+++akkR+n++Pi+eDAr+ +kYr+l+ +vD ifaDvaqpdqari+a+na +flk++g ++is+ka++id+t++++ vf+
   EPX72493.1 187 PEGLVYAVEFSHRSGRDLLNMAKKRTNVIPIVEDARHVQKYRMLIGMVDAIFADVAQPDQARIVALNAAAFLKNEGGVVISVKASCIDSTADASVVFA 284
                  ************************************************************************************************** PP

                  HHHHHHHHTTEEEEEEEE-TTTSTTEEEEEEEE CS
  Fibrillarin 192 eeveklkeeglkvleqvklepyekdhalvvgky 224
                  +ev+k++ee++k++eq++lepye+dh+++vgky
   EPX72493.1 285 REVKKMQEEKIKPQEQLTLEPYERDHCIIVGKY 317
                  *******************************98 PP

>> GCD14  tRNA methyltransferase complex GCD14 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.0   0.0   6.4e-11   1.9e-07      36     153 ..     159     277 ..     155     299 .. 0.76

  Alignments for each domain:
  == domain 1  score: 31.0 bits;  conditional E-value: 6.4e-11
       GCD14  36 LelkpGsvvvesGtGsgslshaiartvaPtGhlftfefheqraekareefrehelsqlvtvthrDvckeGfdeevsgkvDavfLDlPaPwea...ipha 131
                 + +kpG++v+  G+  g+  + +a  v+P G ++++ef ++  +  ++  +++  +  +    r v+k  +   + g vDa+f D+ +P++a     +a
  EPX72493.1 159 IYIKPGAKVLYLGAANGTSVSHVADVVGPEGLVYAVEFSHRSGRDLLNMAKKRTNVIPIVEDARHVQKYRM---LIGMVDAIFADVAQPDQArivALNA 254
                 679**********99987777799**************765555555444444434455556788888666...6799*************95322356 PP

       GCD14 132 akalkkeggrlCsf.sPCieqvq 153
                 a+ lk+egg++ s  + Ci+   
  EPX72493.1 255 AAFLKNEGGVVISVkASCIDSTA 277
                 6778****999887357998655 PP

>> Methyltr_RsmB-F  16S rRNA methyltransferase RsmB/F
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   1.6e-05     0.048       9      87 ..     164     241 ..     159     251 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.6e-05
                      T-EEEESS-TTSHHHHHHHHHTTTTSEEEEEESSCCCHHHHH.HHHHHTT--SEEEEES-CTCCHHHHCC...EEEEEEEE CS
  Methyltr_RsmB-F   9 eetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrva.enlkrLgvtntivleaDarkidkvlgg.elfDriLlDa 87 
                      + ++l l aa G   +h+a+++ ++g v+Av+ +++  + +     kr   tn+i +  Dar+++k+     ++D i  D+
       EPX72493.1 164 GAKVLYLGAANGTSVSHVADVVGPEGLVYAVEFSHRSGRDLLnMAKKR---TNVIPIVEDARHVQKYRMLiGMVDAIFADV 241
                      6678999*************************9865554444034444...345677789999988754434778777775 PP

>> PCMT  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   3.4e-05       0.1      68     109 ..     158     199 ..     145     275 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 3.4e-05
                 HTT--TT-EEEEES-TTSHHHHHHHHHHCTTCEEEEEESBHH CS
        PCMT  68 llelkkgarvLevGsGsGyltavlarlvgekgrvvsierike 109
                  + +k+ga+vL +G+  G     +a +vg++g+v ++e +++
  EPX72493.1 158 NIYIKPGAKVLYLGAANGTSVSHVADVVGPEGLVYAVEFSHR 199
                 4559*********************************98753 PP

>> DREV  DREV methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   8.9e-05      0.27      96     154 ..     165     229 ..     156     244 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 8.9e-05
        DREV  96 kklldlGaGdGeitkrvaptfee...vyatelsetm.rd..rlkkkkynvlsalelqetdvkldl 154
                  k+l lGa +G    +va+ +     vya e s++  rd  ++ kk+ nv+ ++e +    k+ +
  EPX72493.1 165 AKVLYLGAANGTSVSHVADVVGPeglVYAVEFSHRSgRDllNMAKKRTNVIPIVEDARHVQKYRM 229
                 689*****************987789*******976244114579999***99997766556655 PP

>> Secretin_N  Bacterial type II/III secretion system short domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.9     0.054   1.6e+02      31      63 ..      60     106 ..      27     109 .. 0.69
   2 ?    6.9   0.0    0.0027       8.1      50      77 ..     208     235 ..     206     236 .. 0.93

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.054
                 ......................SSTT-TTSEEEEETTTTEEEEEECH CS
  Secretin_N  31 s..............sgassqsgallgkggrvvadprtNsllvrgsp 63 
                 +              +++++++ga++g++++v ++   +  + rg +
  EPX72493.1  60 GargggrggrgasrgGRGGARGGAKGGSKVVVEPHRHGGVFIARGKE 106
                 15555566666667788888888888888888888777777777765 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0027
                 EETTTTEEEEEECHHHHHHHHHHHHHHC CS
  Secretin_N  50 adprtNsllvrgspervarirqlikqLD 77 
                 a  rtN + +  +++ v+++r+li  +D
  EPX72493.1 208 AKKRTNVIPIVEDARHVQKYRMLIGMVD 235
                 6689********************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       480  (0.0267723); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 2359.48
//
Query:       EPX72494.1  [L=427]
Description: 3-hydroxyisobutyryl-CoA hydrolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.8e-108  361.9   0.0   4.8e-108  361.6   0.0    1.1  1  ECH_2     Enoyl-CoA hydratase/isomerase
    1.5e-33  116.1   0.0    3.7e-33  114.9   0.0    1.6  2  ECH_1     Enoyl-CoA hydratase/isomerase


Domain annotation for each model (and alignments):
>> ECH_2  Enoyl-CoA hydratase/isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  361.6   0.0  5.3e-112  4.8e-108       2     320 ..      65     383 ..      64     390 .. 0.96

  Alignments for each domain:
  == domain 1  score: 361.6 bits;  conditional E-value: 5.3e-112
                 EEEEE--GGGTT-B-HHHHHHHHHHHHHHCC-TT-SEEEEEESSSSECE--B--HHHHHHHHCS-THH.HHHHHHHHHHHHHHHC-SS-EEEEE-BEEE CS
       ECH_2   2 gvitLnrpkalNaLslemvralkealkewekddevklvvlkgagekafCAGgDvralyeaakegkkee.eeffreeYklnyliatypkpvvalmdGivm 99 
                 +v+tLnrp++lNa++lem+++l+++l + e++d +k+++lkg+g +af++GgDv++ +  +k+g+ e+ ++ f+eeY+l ++iat++kpvva+m+Gi+m
  EPX72494.1  65 RVLTLNRPEKLNAMNLEMANSLHSKLVRLEQSDLAKVIILKGNG-RAFSSGGDVKEAAIGIKKGELERvRKAFTEEYRLCHTIATFNKPVVAFMNGITM 162
                 799***************************************88.*******************999889***************************** PP

                 THHHHHHTTSSEEEE-TT-EEE--GGGGT----TTHHHHHHCSSTTHHHHHHHH---B-HHHHHHTTS--EE--GGGHHHHHHHHHTT........--- CS
       ECH_2 100 GgGvGlsvhgsfrvvtertvfAmPEtaIGlfPDvGgsyfLsrlpgelGlylalTGarlkgadalaaglathyvpseklealeeaLaelessdeeaveev 198
                 GgG+Gl +h++fr+++e+t+fAmPEt+IG+fPDvG s+f++r+p+++G+ylalT++ ++g+d++ +g+ath+vp+++l +le++La+l++sd ++++++
  EPX72494.1 163 GGGAGLVMHTPFRIACEDTKFAMPETTIGYFPDVGSSFFFNRMPSHVGKYLALTSKVVNGEDCVPLGIATHFVPKHMLGELEQRLADLNTSDINKIRDT 261
                 *************************************************************************************************** PP

                 -----......----SHH.HHHHHHHHHT.-S-TTTHHHHHH...T..--SHHHHHHHHHHHHS-HHHHHHHHHHHHHHTTT--HHHHHHHHHHHHHHH CS
       ECH_2 199 leelaeeaeeeeeesela.ekreaidrlfsadsveeiveaLek..aeaeedewakktletlkkrsPtslkvtleqlrrgrklsslaevlrmElrlalrl 294
                 + e+ +e+++++  s l+ ++ ++idr+f+ ++  +i++aL+k  ++ e++e+ak+t etl ++sP+sl+vt ++++r+ k+ +++e+l+++  ++ ++
  EPX72494.1 262 ICEFGSEVPQPS--SLLKpQTLQTIDRCFAYHDHVSIIRALQKesQSGEASEFAKETFETLLRKSPLSLAVTNSLIERAGKW-TISEALKHDSIASYHM 357
                 *****9988743..444335789*******************9776677889******************************.5*************** PP

                 HHHSSHHHHHHHHTTS-------SSS CS
       ECH_2 295 laekDfveGvrallvdkdkkPkWkpa 320
                 l+++Df  Gv a+l+ k+++PkW+++
  EPX72494.1 358 LSQPDFLIGVDAQLISKTRNPKWSYS 383
                 ***********************986 PP

>> ECH_1  Enoyl-CoA hydratase/isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.9   0.0   4.1e-37   3.7e-33       7     191 ..      65     251 ..      59     302 .. 0.81
   2 ?   -1.8   0.0      0.17   1.6e+03     184     239 ..     314     369 ..     307     381 .. 0.78

  Alignments for each domain:
  == domain 1  score: 114.9 bits;  conditional E-value: 4.1e-37
                 EEEEE--CGCTTEE-HHHHHHHHHHHHHHHHSTTECEEEEEEBTSEEEEEB-HHHHHHHHC.HHHHHHHCCHHHHHH...HHHHSSSEEEEEE-SEEET CS
       ECH_1   7 aviklnrPeavNalsaelltEliqalekleddksvravvLtGgdkaFaaGadlkemaeeek.akqallkeevlelwt...klytvpkpviaavnGaaig 101
                  v++lnrPe++Na++ e+ + l   l +le++  +++++L G ++aF++G+d+ke+a + k  + + +++++ e ++    + t +kpv+a +nG  +g
  EPX72494.1  65 RVLTLNRPEKLNAMNLEMANSLHSKLVRLEQSDLAKVIILKGNGRAFSSGGDVKEAAIGIKkGELERVRKAFTEEYRlchTIATFNKPVVAFMNGITMG 163
                 579****************************************************998876666667777776665411178999************** PP

                 HHHHHHHHSSEEEEETTTEEE-GGGGGTS--CTTCHHHHHHHHHHHHHHHHHHHT-EEEHHHHHHCTSSSEEESGGGHHHHHHHHHHHHH CS
       ECH_1 102 GGlelalacDiviaadnasfglnelklGlipgaggtqilarkvGkskAeeilllgkkisaqealkvGlvdkvvpeeqlleealelaekla 191
                 GG+ l++ + ++ia ++ +f+ +e+ +G +p++g + ++ ++++ +  ++++l+ k +++++    G+  ++vp+  l e   ++++ l+
  EPX72494.1 164 GGAGLVMHTPFRIACEDTKFAMPETTIGYFPDVGSS-FFFNRMPSHVGKYLALTSKVVNGEDCVPLGIATHFVPKHMLGE-LEQRLADLN 251
                 *******************************87665.556778999****************************975533.333333333 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.17
                 HHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTSHHHHHHHHH CS
       ECH_1 184 lelaeklaekspaalrqlkealnakledalaeqleaeaklfestfskddikeGlqa 239
                  e  e l++ksp++l+   + ++++ + +  e+l+ ++   +++ s+ d+  G++a
  EPX72494.1 314 KETFETLLRKSPLSLAVTNSLIERAGKWTISEALKHDSIASYHMLSQPDFLIGVDA 369
                 56788999999999999999999998899999999999888888888887766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (427 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       566  (0.031569); expected 358.6 (0.02)
Passed bias filter:                      511  (0.0285013); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.28s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 2948.34
//
Query:       EPX72495.1  [L=249]
Description: mitochondrial ribosomal protein subunit Yml6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.8e-48  163.7   0.0    4.5e-48  163.5   0.0    1.0  1  Ribosomal_L4  Ribosomal protein L4/L1 family
  ------ inclusion threshold ------
       0.11   13.1   0.0       0.23   12.1   0.0    1.5  1  SlpA          Surface later protein A domain


Domain annotation for each model (and alignments):
>> Ribosomal_L4  Ribosomal protein L4/L1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.5   0.0     5e-52   4.5e-48       2     191 ..      19     218 ..      18     219 .. 0.90

  Alignments for each domain:
  == domain 1  score: 163.5 bits;  conditional E-value: 5e-52
                   EE-HHHHSS---HHHHHHHHHHHHHSS-EE------TTTSS---S-SS-SSSSSS---S-TTSTTSTT---SS---S.EEHHHHHHHHHHHHHHHHH CS
  Ribosomal_L4   2 eLspkvFaapirrdlihravvaylanrrqgtastkarsevsgsgrklwkQKGtGrARvgsirspiargGgvahgpkperdystklnkKvrrlAlrsa 98 
                   ++++++ ++ +rrd++hravv++ ++ rqgtastk rse+  sg+kl++QKGtG ARvg+++spi++gG+vahgpkp rd+stkl++ v+ +A+r+a
    EPX72495.1  19 QVPKHFLQERFRRDILHRAVVYEADADRQGTASTKRRSEINCSGKKLYRQKGTGYARVGDASSPIRKGGAVAHGPKP-RDFSTKLQSQVYDMAMRVA 114
                   6899999*********************************************************************9.******************* PP

                   HHHHHHTT-EEEES--.-.-SS--HHHHHHHHHHTT-...TTSSEEEEES.......SSSCHHHHHHT.T-TTEEEEESTT--CHHHHHSSEEEEEH CS
  Ribosomal_L4  99 Lsakakqglllvvdnl.epleesktkelvellkklgl...ksksvLivvs.......ekdenlvlaar.nlpgvevieveslnvydllkadkvvitk 183
                   Ls ++++++l+v+++  + ++ ++ + l+e++ + +l     +s++++ +       +k++n+++aa    +++++++v + +++d lk+ k++i+ 
    EPX72495.1 115 LSYRFAKNDLMVIEDRiD-IPLAQSRVLQEIILQHQLghpYGRSLFVLHDeffeptnAKQNNFYKAAStQGKHLQLCSVSEFQIRDALKYGKLFIDS 210
                   **************7436.***************9997654555555555788777756778988766156778*********************** PP

                   HHHHHHHH CS
  Ribosomal_L4 184 saveklee 191
                   +a+++l e
    EPX72495.1 211 KAMSTLLE 218
                   ***99865 PP

>> SlpA  Surface later protein A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   2.6e-05      0.23       4      48 ..      35      78 ..      33      80 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.6e-05
        SlpA  4 hnAyvYdknGkrvkktkklkkgssvktygkk.vtIkNgkkYYkIgk 48
                h A vY ++  r + t+  k+ s ++  gkk +  k g  Y ++g+
  EPX72495.1 35 HRAVVYEADADRQG-TASTKRRSEINCSGKKlYRQK-GTGYARVGD 78
                99************.789*************88886.999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       404  (0.0225333); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 1901.04
//
Query:       EPX72496.1  [L=158]
Description: inner membrane peptidase complex catalytic subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.2e-09   37.1   0.0    4.7e-09   36.1   0.0    1.6  1  Peptidase_S24  Peptidase S24-like
    3.5e-06   26.8   0.0     0.0001   22.1   0.0    2.4  2  Peptidase_S26  Signal peptidase, peptidase S26


Domain annotation for each model (and alignments):
>> Peptidase_S24  Peptidase S24-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.1   0.0   5.2e-13   4.7e-09       4      67 ..      34     104 ..      32     107 .. 0.87

  Alignments for each domain:
  == domain 1  score: 36.1 bits;  conditional E-value: 5.2e-13
                    SSTTCCTXXT.TXEEEEECTS.....---TTSEEEEEETTCE.-EEEEEEEEETTEEEEE.SST.T.STEEEE CS
  Peptidase_S24   4 GdSMeptlld.GdlilVdkfs.....epkrGdivvfrlpgee.eayiKrviglpgdrvllasnn.e.ypplyi 67 
                    G SM+ptl++ G+++l dk++         Gd vv+  p ++ ++ +Kr+ig+pgd+v   +++   ++++++
     EPX72496.1  34 GPSMMPTLNSgGEFVLLDKYHgrlgrCCTVGDMVVAAKPTGPrQYVCKRIIGMPGDVVF--ADPlVsDHKIKV 104
                    89*******9459************999********9999999***************9..555544666665 PP

>> Peptidase_S26  Signal peptidase, peptidase S26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0     0.013   1.2e+02      50      65 ..      77      92 ..      52      97 .. 0.77
   2 !   22.1   0.0   1.2e-08    0.0001      97     132 ..     101     136 ..      93     143 .. 0.83

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.013
  Peptidase_S26 50 vpllKrVlalagqevc 65
                    +  Kr+++++g+ v 
     EPX72496.1 77 QYVCKRIIGMPGDVVF 92
                   4778999999999885 PP

  == domain 2  score: 22.1 bits;  conditional E-value: 1.2e-08
  Peptidase_S26  97 crvlaegelfllskevadSfDsRYfGpvpassvigv 132
                    +  +++g+++l++++v +S+DsR +Gpvp   + ++
     EPX72496.1 101 KIKVPKGHVWLAGDNVMHSLDSRIYGPVPMGLIKAK 136
                    56799************************9887654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       287  (0.0160076); expected 358.6 (0.02)
Passed bias filter:                      271  (0.0151152); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 1120.55
//
Query:       EPX72497.1  [L=445]
Description: MBF transcription factor complex subunit Rep1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (445 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       356  (0.0198561); expected 358.6 (0.02)
Passed bias filter:                      248  (0.0138323); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 3140.64
//
Query:       EPX72498.1  [L=461]
Description: glucan 1,3-beta-glucosidase Exg3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.6e-10   40.9   4.0    7.4e-10   38.7   4.0    2.1  1  Cellulase  Cellulase (glycosyl hydrolase family 5)
  ------ inclusion threshold ------
       0.16   11.2   0.3         13    4.9   0.1    2.3  2  Enolase_C  Enolase, C-terminal TIM barrel domain


Domain annotation for each model (and alignments):
>> Cellulase  Cellulase (glycosyl hydrolase family 5)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.7   4.0   8.2e-14   7.4e-10      14     252 ..      62     297 ..      49     332 .. 0.64

  Alignments for each domain:
  == domain 1  score: 38.7 bits;  conditional E-value: 8.2e-14
                 CETTSCGGSHHHHHHHHHHHT-SEEEEEEEC.....TGGTTSSTTT...GCTHHHHHHHHHHHHHHHHTT-EEEEEEESSTTTCSSSSTTTTHHH.... CS
   Cellulase  14 stswgnpyttkalidevkdagfntvRlpvsw.....gelvenapdy...kvdenslerveevvkyakenglyvildiHseegwltkadgnssedt.... 100
                 + +w +   t+  ++ +++ g+ntvR+p+++     ++ ++ +p      v +nsl+++ + ++ a ++ + v++d H     + +a+g s++ t    
  EPX72498.1  62 ENHWNSW-ITTNDFSYLQQLGVNTVRIPIGYwtlgqNQFLQGTPFAqytGVYQNSLNILVQKIQEAASKSIGVLVDFHGV---YGQANGGSHSGTssgk 156
                 4556443.677778999*************54776533333222223345678**************************6...3333333333333343 PP

                 ........HHHHHHHHHHHHHHHHTTTTTTEEEESSSS--STTCTCCTCHHHTTHHHHHHHHHHHHHHHHTTSSEEEEECHHHHTBHHHHHCTSGSSSS CS
   Cellulase 101 ........aeeffkklwtqiAerykkndevvifelmNEPhgnntgaewtseeadevkayaeeaikaIRavgpnrliivegnswsgnldgavlndPndsq 191
                          ++ + ++++  A+ ++++++ v++e+ NEP  + +        +d +++y+++a k+I ++ p+   i +g  w ++   +  n  ++++
  EPX72498.1 157 veffsnpqNQQRMVSALQYAASVLQSQPNLVGIEVINEPEWG-Q--------YDVLNSYYQNARKVIPSYLPT--YIGDG--WDKDHWVNWVNG-QENN 241
                 3333333344446669***********************993.3........3779*******9999888773..33344..666555544442.2224 PP

                 TTEEEEEEEETTTHHHTGCGSHSCTHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSTTSSH CS
   Cellulase 192 dnliysvHfYgpsdfaqtefgkdltdktnlaqrledaakylvekgipviigEfGgsnadgd 252
                   +i++ H+Y        +     +++++++++l++  +y ++    +i+gE+  + +d++
  EPX72498.1 242 GLYIVDHHSYFCFGGDLVN-----QSPKTITDKLNSGEEYDKTSLSNLIVGEWSCTLTDQS 297
                 6677777777633332222.....2455566666666555555555677777777666665 PP

>> Enolase_C  Enolase, C-terminal TIM barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0    0.0026        23      13      50 ..     145     182 ..     139     191 .. 0.90
   2 ?    4.9   0.1    0.0015        13     132     180 ..     197     246 ..     188     275 .. 0.67

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.0026
                 E-GGGSSSS--SSEEEEE-TT-SSHHHHHHHHHHHHHH CS
   Enolase_C  13 nGGshagnklalqefmilPvgassfkealrlGaevyhk 50 
                 nGGsh+g +    ef   P + + +  al+  a v ++
  EPX72498.1 145 NGGSHSGTSSGKVEFFSNPQNQQRMVSALQYAASVLQS 182
                 9******************************9999876 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.0015
                 EEEHHHHHHHHHHHHH...HS-EEEEES-S-TT-HHHHHHHHHHHTTTSEEE CS
   Enolase_C 132 kltseqladlykelvk...kyPivsiedpldeddweawkklteelgdkvqiv 180
                 +  ++ l  +y++  k   +y  + i d++d+d+w  w + +e+ g  + iv
  EPX72498.1 197 WGQYDVLNSYYQNARKvipSYLPTYIGDGWDKDHWVNWVNGQENNG--LYIV 246
                 5567778888876555111555678*************99988877..4443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (461 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       494  (0.0275531); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.38
# Mc/sec: 3668.41
//
Query:       EPX72499.1  [L=665]
Description: arrestin Aly1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.2e-19   68.8   0.0    9.6e-17   61.7   0.0    2.4  2  Arrestin_C  Arrestin (or S-antigen), C-terminal domain
    1.3e-09   38.2   0.0    6.4e-08   32.8   0.0    2.6  2  Arrestin_N  Arrestin (or S-antigen), N-terminal domain


Domain annotation for each model (and alignments):
>> Arrestin_C  Arrestin (or S-antigen), C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.6   0.0    0.0045        41      75     132 ..     280     336 ..     243     338 .. 0.84
   2 !   61.7   0.0   1.1e-20   9.6e-17       1     133 [.     354     515 ..     354     516 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.0045
                 TEE.EEEEEEE.----B-----S---EEEEEEEEEEEEEEES.SEEEEEEEEEEEEEB- CS
  Arrestin_C  75 akdkletevelqiPeeltpssarnvelikvsYklkvkltlsg.sggelslelPivlgsv 132
                 a ++++ ++ l iP+ +++s   + +l  v+Y+l+ +++  g  +++l    P++l+  
  EPX72499.1 280 APGEYTYNFDLAIPNCFPESV--EAKLGWVRYFLEATVERFGtFKSNLNGRTPVQLVRT 336
                 5567788899****8888888..9**************999778899999999999865 PP

  == domain 2  score: 61.7 bits;  conditional E-value: 1.1e-20
                 ----EEEEEEES-SEEETT--EEEEEEEEE-SSSEEEEEEEEEEEEEEEESS.................SEEEEEEEEEEEEE---B-TTEE.EEEEEE CS
  Arrestin_C   1 wdgkvsleaslpkkgyvpGetipvtvkidndskkkvkkikvslvqhvdvcafnr...............snkkeknvvaksdsvkvtsaakdkleteve 84 
                 wd+++++e+++++k++  Get+p+t+k+  + k++++k+++s+v++ ++++++r               ++ k+++ + + +s + + +   +  +++ 
  EPX72499.1 354 WDERLHYELQVSGKSFRLGETVPITFKFLLLDKVRLYKLSLSVVETAEYWCRSRkfhrvdpkrrvllteRSVKQHQNIDSLFSIPDEGDGISSAIFNFD 452
                 99**************************************************999*9988877666554444444444444444446666666666689 PP

                 E.----B--.....---S---EEEEEEEEEEEEEEE........S.SEEEEEEEEEEEEEB-- CS
  Arrestin_C  85 lqiPeeltp.....ssarnvelikvsYklkvkltls........g.sggelslelPivlgsvp 133
                 +++P+ l +     + +++ + ik++++lk  l ls        + + +e+ +e Pi ++s+ 
  EPX72499.1 453 VKLPTCLVKerdrlTFDTTYKYIKIRHRLKALLVLSvenennpdKrKYFEINIETPIRILSCR 515
                 999988888777776668*************************956999**********9985 PP

>> Arrestin_N  Arrestin (or S-antigen), N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.8   0.0   7.1e-12   6.4e-08      19     131 ..     186     323 ..     183     336 .. 0.69
   2 ?   -2.8   0.0      0.67     6e+03      94     122 ..     449     484 ..     446     503 .. 0.55

  Alignments for each domain:
  == domain 1  score: 32.8 bits;  conditional E-value: 7.1e-12
                 EEEEEE-CCCCTT.CEEEEEEEEEEEESSSSTTTT.....................CCCEEEEEEEEEEEEESTSSSSS.SSSSHHHHH.......... CS
  Arrestin_N  19 dGkvlleteelkkarkvkielsgkartgweeseva.....................gktfrkdltlkkkqeyleteksllkskkdsqek.......... 86 
                  G  +l+ +++ ++r++ +++ g+ rt+w e   +                     + +     ++ +++                             
  EPX72499.1 186 RGALVLRVAKPANIRGISLSFGGRSRTEWPEGIPVkghetyedkiiichhwnfynpNMKDADAPQHGADV------------------Arlvgqhvslp 266
                 68999999*********************87544457666666666666666655422222222222222..................13333333333 PP

                 ............HHH-TTEEEEEE---TTS--SECSGEEEEEEEEEEEEECCCE--C CS
  Arrestin_N  87 ............LpkGehafpFsfelPknlpsSfeGkaggvrYevkvtldrpwkidk 131
                             +  Ge++++F + +P+  p S+e+k g vrY++++t++r   ++ 
  EPX72499.1 267 sssaaglrgysvFAPGEYTYNFDLAIPNCFPESVEAKLGWVRYFLEATVERFGTFKS 323
                 333334445555777***********************************9885554 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.67
                 EEEEE---TTS--SE.......CSGEEEEEEEEEEE CS
  Arrestin_N  94 fpFsfelPknlpsSf.......eGkaggvrYevkvt 122
                 f+F ++lP+ l+          + k+ ++r+ +k+ 
  EPX72499.1 449 FNFDVKLPTCLVKERdrltfdtTYKYIKIRHRLKAL 484
                 667777766544333444444455556666666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (665 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       474  (0.0264376); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 4849.68
//
Query:       EPX72500.1  [L=157]
Description: DUF866 domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.2e-56  189.6   0.5    3.6e-56  189.4   0.5    1.0  1  DUF866          Eukaryotic protein of unknown function (DUF86
     0.0018   19.1   0.1     0.0029   18.4   0.1    1.3  1  DUF1062         Protein of unknown function (DUF1062)
      0.009   17.2   0.1       0.02   16.1   0.1    1.7  1  Basic           Myogenic Basic domain
  ------ inclusion threshold ------
      0.015   15.7   3.6      0.069   13.6   3.9    1.8  2  zf-C4pol        C4-type zinc-finger of DNA polymerase delta
      0.091   13.2   4.1       0.13   12.8   0.1    2.3  2  Cytochrom_c3_2  Cytochrome c3


Domain annotation for each model (and alignments):
>> DUF866  Eukaryotic protein of unknown function (DUF866)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  189.4   0.5   9.9e-60   3.6e-56       1     154 [.       5     154 ..       5     155 .. 0.97

  Alignments for each domain:
  == domain 1  score: 189.4 bits;  conditional E-value: 9.9e-60
                 EEEEEEEEESEEEEE--T...T--EEEEEEETTSS.-EEEEEEE-TT-BEE-TTSS-EESEEE--SSSS--EEEEEE-.-TTTTEEEGGTS-EEEEEEE CS
      DUF866   1 aLqikaelenvtslepadeeedfeytfkvkctsCreehpkevsisreekveisgsrgeanfvvkcklckressisikketeksytaedsgkfktilefd 99 
                 aL+++ael +v++l+p+ eee f+y+f+v+c sC+ +h++++ i+r+e ++i+gs+gean+++ ck+ckr+s+isi++   ++yt+++  +++++le++
  EPX72500.1   5 ALNLQAELVGVSNLSPK-EEEAFYYMFEVECGSCHDIHENPIGICRSEVHDIPGSKGEANLIWTCKNCKRTSTISIVS-RFHPYTNSQ--SQQRLLELE 99 
                 599*************9.788*********************************************************.999**9999..5569***** PP

                 EESEEEEEE---S-EEEEET.TS-EEEEE--TS.-EEEEETTTTEEEEEEEEEEEE CS
      DUF866 100 crGlelvefkpeggwkvesa.sgtkfedvdLsegeWydYdekageeVsitelevei 154
                 crG+elv+f p+g+w+++++ +gt+f++++L++ +WydYde+ag eVsi++++++i
  EPX72500.1 100 CRGCELVKFVPDGEWVAKGEaNGTQFTEIELED-DWYDYDENAGSEVSISDMQWTI 154
                 ********************************9.********************98 PP

>> DUF1062  Protein of unknown function (DUF1062)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.1     8e-07    0.0029      12      95 ..      64     147 ..      61     154 .. 0.74

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 8e-07
     DUF1062  12 liykCekCdstwnltileRvkvksidkellerllsNdkel.areyafdlellrrnkaeldeepeyevekeileeaaeeeeleiei 95 
                 li  C++C++t  ++i++R ++   ++++ + l+ +++ +   ++  d e + + +a+ ++++e+e+e+++ + ++ ++  e++i
  EPX72500.1  64 LIWTCKNCKRTSTISIVSRFHPYTNSQSQQRLLELECRGCeLVKFVPDGEWVAKGEANGTQFTEIELEDDWYDYDE-NAGSEVSI 147
                 899******************9776655544444444433133567788888888888888899999888888755.66666665 PP

>> Basic  Myogenic Basic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.1   5.6e-06      0.02      67      80 ..      63      76 ..      10      78 .. 0.77

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 5.6e-06
       Basic 67 CLlWACKvCKRksv 80
                 L+W+CK CKR s+
  EPX72500.1 63 NLIWTCKNCKRTST 76
                49*********997 PP

>> zf-C4pol  C4-type zinc-finger of DNA polymerase delta
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.1      0.34   1.2e+03      42      52 ..      31      41 ..      19      55 .. 0.58
   2 ?   13.6   3.9   1.9e-05     0.069       9      49 ..      53     104 ..      34     124 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.34
    zf-C4pol 42 etvCqsCaqgs 52
                e +C sC++ +
  EPX72500.1 31 EVECGSCHDIH 41
                45666773333 PP

  == domain 2  score: 13.6 bits;  conditional E-value: 1.9e-05
    zf-C4pol   9 k...........kalCkkCrsdkqesllkllsrlkelekklneletvCqsCa 49 
                 +              Ck+C++ ++ s+++  + +++++++ + le +C+ C+
  EPX72500.1  53 HdipgskgeanlIWTCKNCKRTSTISIVSRFHPYTNSQSQQRLLELECRGCE 104
                 244444444556678****9999999*************************3 PP

>> Cytochrom_c3_2  Cytochrome c3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   3.6e-05      0.13      55      76 ..      28      49 ..       8      54 .. 0.76
   2 ?    1.2   1.0      0.14     5e+02      28      64 ..      67     103 ..      58     107 .. 0.50

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3.6e-05
                    CTSSS-GGGTS-TTTSBT-GGG CS
  Cytochrom_c3_2 55 hekeleCteCHkeHkksekvCa 76
                    ++ e+eC +CH  H++   +C+
      EPX72500.1 28 YMFEVECGSCHDIHENPIGICR 49
                    35799***********999996 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.14
                     HHHHHH--HHHCHTTSST.TSSBTTSSCTSSS-GGGT CS
  Cytochrom_c3_2  28 kClsCHgkleelakktkeakeanphkshekeleCteC 64 
                     +C++C  + +    ++ +  +++++++   eleC  C
      EPX72500.1  67 TCKNCKRTSTISIVSRFHPYTNSQSQQRLLELECRGC 103
                     4555655444332222222333333333455666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       665  (0.0370907); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.40u 0.20s 00:00:00.60 Elapsed: 00:00:00.37
# Mc/sec: 1281.61
//
Query:       EPX72501.1  [L=259]
Description: origin recognition complex subunit Orc6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-25   90.0   3.3    1.7e-21   76.9   0.2    2.1  2  ORC6      Origin recognition complex subunit 6 (ORC6)
  ------ inclusion threshold ------
      0.082   13.1   0.0       0.18   12.0   0.0    1.5  1  DUF748    Domain of Unknown Function (DUF748)
          2    8.5   3.7         40    4.4   0.1    3.7  4  DUF1707   Domain of unknown function (DUF1707)


Domain annotation for each model (and alignments):
>> ORC6  Origin recognition complex subunit 6 (ORC6)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.9   0.2   2.8e-25   1.7e-21       9      87 ..      17      94 ..      10     107 .. 0.92
   2 !   13.9   0.3   4.1e-06     0.024     244     350 ..     131     230 ..     121     232 .. 0.85

  Alignments for each domain:
  == domain 1  score: 76.9 bits;  conditional E-value: 2.8e-25
        ORC6  9 sgglpkkllslassLynlSlskkvvlkneeEiARchiCaelAaekLkekldlpysvkkiPlppkaykklldlfrqsLsn 87
                +++++ +llsla+s++++S+ +kvvlk++eE +R+++ a+lA+e +k +ldl+  v+ +P+p+k+y+k +++f+++L +
  EPX72501.1 17 EEEYNDRLLSLAESFLAWSR-SKVVLKATEEPCRPYMAAHLACEVMKGRLDLEVHVTATPIPKKKYEKQFTYFQEELRP 94
                4567****************.******************************************************9976 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 4.1e-06
        ORC6 244 rklvkksewqlacGlvakayfkvnhrelrqtagideglpkk..mqyqkeglsredvdewiklveewikgeeWfreiekkydyfdgaeeeesqakeskar 340
                 ++lv++ + +  +G+ ++ay +v  +   ++++  +  + k  + ++++++s +++++w++l           + +    +  ++ e +e+q+++ k +
  EPX72501.1 131 TTLVENMRIEHMKGVLIAAYLIVSAKMSGKDELRVNHAERKaaQVILQDTNSISQIQYWMQLL---------SESLVFHQMPLNAMEGYEVQKQRTKPW 220
                 5555666666678999999999999998888888777787888999*****************.........56666899******************* PP

        ORC6 341 eglGsMlqdr 350
                 +g++sM q +
  EPX72501.1 221 SGIASMVQIN 230
                 ******9966 PP

>> DUF748  Domain of Unknown Function (DUF748)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   2.9e-05      0.18      88     115 ..      47      77 ..      38      87 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.9e-05
      DUF748  88 plspYlakylglelesGkLsldlrykl...a 115
                 p  pY+a++l  e+ +G+L+l++++++   +
  EPX72501.1  47 PCRPYMAAHLACEVMKGRLDLEVHVTAtpiP 77 
                 668*********************9965542 PP

>> DUF1707  Domain of unknown function (DUF1707)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1       1.7   9.9e+03      26      33 ..      17      24 ..      16      28 .. 0.80
   2 ?    0.7   0.0     0.092   5.5e+02      12      28 ..      53      69 ..      49      73 .. 0.81
   3 ?    1.4   0.0     0.055   3.3e+02      43      52 ..      90      99 ..      88      99 .. 0.90
   4 ?    4.4   0.1    0.0066        40       1      17 [.     163     179 ..     163     182 .. 0.91

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.7
     DUF1707 26 ldEfdeRl 33
                 +E+ +Rl
  EPX72501.1 17 EEEYNDRL 24
                58999997 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.092
     DUF1707 12 velLrealaeGrLtldE 28
                +++L+  +  GrL+l+ 
  EPX72501.1 53 AAHLACEVMKGRLDLEV 69
                6788888999****986 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.055
     DUF1707 43 geLaalvaDL 52
                +eL++l++DL
  EPX72501.1 90 EELRPLTKDL 99
                79*******9 PP

  == domain 4  score: 4.4 bits;  conditional E-value: 0.0066
     DUF1707   1 lRasdadReravelLre 17 
                 lR+++a+R++a  +L++
  EPX72501.1 163 LRVNHAERKAAQVILQD 179
                 7**********999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       731  (0.0407719); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.27s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1898.80
//
Query:       EPX72502.1  [L=393]
Description: nuclear export factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      4e-24   85.5   5.2    8.2e-22   77.9   5.2    2.1  1  SAC3_GANP        SAC3/GANP family
    1.6e-07   31.4   1.4    4.2e-07   30.0   0.1    2.2  3  CSN8_PSD8_EIF3K  CSN8/PSMD8/EIF3K family
  ------ inclusion threshold ------
      0.035   14.1   0.1      0.094   12.7   0.1    1.7  1  COX5A            Cytochrome c oxidase subunit Va


Domain annotation for each model (and alignments):
>> SAC3_GANP  SAC3/GANP family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.9   5.2   1.4e-25   8.2e-22      41     288 ..     139     357 ..      94     361 .. 0.85

  Alignments for each domain:
  == domain 1  score: 77.9 bits;  conditional E-value: 1.4e-25
                 XXXXXXXXXXXXXXX-----HHHHHHHHHHHHHHTG..G..GTTTCHHHHHHHHHHHHHHHHHTT--SHHHHHHHHHHHHHHHHHHHHHHHTTS.---C CS
   SAC3_GANP  41 KeysRsaagqeeplpsdlRppevLkkTldYLlkeildreeeelaevydFiwDRtRaiRqDltiqnlskaeaveilerivrfhilslhrlceepessfde 139
                 K+y R    ++ p p+++Rp ++Lk+Tl+ L k+         ++ y +i D +++ RqDlt+q+++++ +v ++e  +r+       l +        
  EPX72502.1 139 KRYLR---LTSDPDPNTIRPLPILKQTLELLKKKWK------EEKNYAYICDQFKSLRQDLTVQRIQNDFSVLVYEIHARIA------LEKG------- 215
                 66666...567899**************98886655......3578*****************************9877764......3333....... PP

                 HHHHHHHHHHHHHHHHHHHHHH...---TTHHHHHHHHHHHTT...T-HHHHHHHCTS-HHHHTSHHHHHHHHHHHHH--TTHHHHHHHHTTS-HHHHH CS
   SAC3_GANP 140 qqnleqLqkclqsLlelYddlrkkkeelpneaefrayylLlnl...rdpdilrevqelpseilkspevqlalklvaalqennyvrffklvkevsylqac 235
                   ++ + ++c ++L++lY           + +ef ay +L+ l   +++++ + + +l++e  k+p vq al++++a+++++y+rff+l+ +++ +   
  EPX72502.1 216 --DIGEYNQCQTQLFHLYGFDI--P---GKVKEFLAYRILYILytrNRSEMNSLLANLEDEEKKNPAVQHALEVRSAIATSDYYRFFQLYLTAPNMGGY 307
                 ..3566788999******7654..2...2456777777766665437789999999******************************************* PP

                 HHGGGHHHHHHHHHHHHHHHS-TT---EEHHHHHHHTT-SSHHHHHHHHHHTT CS
   SAC3_GANP 236 llerhfnevRrkalkalsraykskskkvpleeLaelLlfddeeeaeefceayg 288
                 l+  ++++ R +a+ ++s+ay   + +v++e +a+ L+f+d +e+++f+ +++
  EPX72502.1 308 LMDLFVERERVNAMYTISKAY---RPSVSVEFIANTLAFEDMDECRNFLLECQ 357
                 *********************...689*********************87765 PP

>> CSN8_PSD8_EIF3K  CSN8/PSMD8/EIF3K family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       1.6   9.3e+03      64      76 ..       6      18 ..       5      24 .. 0.84
   2 ?   -1.2   0.1       0.3   1.8e+03      68      95 ..     170     199 ..     160     211 .. 0.70
   3 !   30.0   0.1   7.1e-11   4.2e-07       5     123 ..     241     357 ..     238     377 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 1.6
  CSN8_PSD8_EIF3K 64 ksddlsadltadv 76
                     +s++++++l++++
       EPX72502.1  6 ESNPWPDSLKEFI 18
                     6899999999998 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.3
  CSN8_PSD8_EIF3K  68 lsa..dltadvagleelvReeiaklvgkaY 95 
                      +++  ++ ++++++++l ++ +++ +++ +
       EPX72502.1 170 WKEekNYAYICDQFKSLRQDLTVQRIQNDF 199
                      555447888999998888888887777655 PP

  == domain 3  score: 30.0 bits;  conditional E-value: 7.1e-11
  CSN8_PSD8_EIF3K   5 elytniLlkaLtqndladfrlllkrlpaaiqqsdeeiqklltLetlLeeanyakfwstlksddlsadltadvagleelvReeiaklvgkaYe.s 97 
                      e++++  l+ L++   ++ + ll+ l ++ +++ +++q++l++  ++ + +y +f++++     ++   + ++ + e  R ++++ ++kaY+ s
       EPX72502.1 241 EFLAYRILYILYTRNRSEMNSLLANLEDEEKKN-PAVQHALEVRSAIATSDYYRFFQLYLT--APNMGGYLMDLFVERERVNAMYTISKAYRpS 331
                      7778888999999999***********999998.***********************6665..5888999*********************659 PP

  CSN8_PSD8_EIF3K  98 IsadvlaelLglssdeelekfvkevg 123
                       s + +a+ L +++++e  +f  e++
       EPX72502.1 332 VSVEFIANTLAFEDMDECRNFLLECQ 357
                      *******************9998876 PP

>> COX5A  Cytochrome c oxidase subunit Va
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   1.6e-05     0.094      64      97 ..     162     194 ..     155     199 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1.6e-05
       COX5A  64 ilEavkekvenkkqiYeyllqelkpvleeLgist 97 
                 +lE +k+k +++k+ Y y+ ++ k+++++L ++ 
  EPX72502.1 162 TLELLKKKWKEEKN-YAYICDQFKSLRQDLTVQR 194
                 79************.***************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (393 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1095  (0.0610742); expected 358.6 (0.02)
Passed bias filter:                      539  (0.030063); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.45
# Mc/sec: 2626.57
//
Query:       EPX72503.1  [L=262]
Description: Bin3 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.4e-31  108.1   0.1      6e-31  107.3   0.1    1.4  1  Bin3             Bicoid-interacting protein 3 (Bin3)
    1.9e-12   47.3   0.0    2.5e-12   46.9   0.0    1.1  1  Methyltransf_23  Methyltransferase domain
    5.8e-11   42.4   0.0    5.9e-07   29.4   0.0    2.2  2  Methyltransf_31  Methyltransferase domain
    1.4e-07   32.1   0.0    0.00018   22.2   0.0    2.3  2  Methyltransf_25  Methyltransferase domain
    3.4e-05   24.5   0.0      0.012   16.3   0.0    2.3  2  Methyltransf_12  Methyltransferase domain
    4.3e-05   24.1   0.0      0.068   13.8   0.0    2.2  2  Methyltransf_11  Methyltransferase domain
    0.00041   20.3   0.0     0.0011   19.0   0.0    1.7  2  Methyltransf_18  Methyltransferase domain
     0.0025   17.2   0.0     0.0053   16.2   0.0    1.4  1  PrmA             Ribosomal protein L11 methyltransferase (Prm
     0.0032   17.0   0.1     0.0081   15.7   0.0    1.6  2  Methyltransf_PK  AdoMet dependent proline di-methyltransferas
     0.0045   16.5   0.0      0.014   14.9   0.0    1.8  2  Methyltransf_4   Putative methyltransferase
     0.0061   16.1   0.0      0.022   14.3   0.0    1.8  2  MTS              Methyltransferase small domain
      0.009   15.3   0.0        3.4    6.9   0.0    2.2  2  CMAS             Mycolic acid cyclopropane synthetase
  ------ inclusion threshold ------
      0.031   13.9   0.0        2.1    7.9   0.0    2.2  2  NodS             Nodulation protein S (NodS)
       0.13   11.9   0.0       0.29   10.8   0.0    1.5  1  PCMT             Protein-L-isoaspartate(D-aspartate) O-methyl
       0.19   11.0   0.0        6.5    6.0   0.0    2.2  2  Methyltransf_2   O-methyltransferase domain


Domain annotation for each model (and alignments):
>> Bin3  Bicoid-interacting protein 3 (Bin3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.3   0.1     5e-34     6e-31       1     108 []     146     258 ..     146     258 .. 0.96

  Alignments for each domain:
  == domain 1  score: 107.3 bits;  conditional E-value: 5e-34
        Bin3   1 ydvilalSvtkwihLnkgDeglkrlfkkiyellkpgGvlilEpqewksYkkkkklseelkenykelklrpedfeevLleevgfesveeleekeee.... 95 
                 +++ilalSvtkwihLn  Degl+++fk+++++l+++G li+Epq+w+sY k++k++  ++++++++++rpe+f+e+L++ +gf++++ +++++++    
  EPX72503.1 146 FQTILALSVTKWIHLNGLDEGLLNFFKNMHAALETDGALIIEPQSWDSYLKAAKKNIIFERSLSKIRIRPENFPEILEQ-TGFHLQNVISSEDAKpknv 243
                 789****************************************************************************.9****99999888778899 PP

        Bin3  96 .skgf.kRpilvyrk 108
                  +kg+ kR++++yrk
  EPX72503.1 244 eRKGYlKRDLFLYRK 258
                 989977*******98 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.9   0.0   2.1e-15   2.5e-12      11     161 ..      23     228 ..       9     232 .. 0.82

  Alignments for each domain:
  == domain 1  score: 46.9 bits;  conditional E-value: 2.1e-15
  Methyltransf_23  11 dklerllpk.lraggrvLdiGcGtG.illevlrengfsvt.gvDlspeaveiae........................................ 61 
                      d ++++lpk l+++ +vLd+Gc+ G i+++v++ + ++++ g+D++++++++ae                                        
       EPX72503.1  23 DSRLEALPKdLFENTSVLDVGCNNGtITTQVASLFSVKYAlGIDIDSILIKKAEkhlefvasrigpsnddcpmisrynfypissikkfsriqtk 116
                      44445555538**************99********998777**************************************************999 PP

  Methyltransf_23  62 ........kakkaqkdqfdeqeaaepqgkfdlIvlrevlehvp....d..ppellrqiatllkpgGylllseplaslkedrllldwlylvpagr 141
                              +++ +++ q+  ++ ++p+++f++I +  v+ +++    d  +   ++++++ l+ +G l+++ +  +++ + + +++ +++    
       EPX72503.1 117 fqeplneeGFPHNVQFQAVDIQKWYPKKRFQTILALSVTKWIHlnglDegLLNFFKNMHAALETDGALIIEPQSWDSYLKAAKKNIIFERSL-S 209
                      9999998877777777777889999******************955535677****************999874444444444444555544.5 PP

  Methyltransf_23 142 hisffsarslkelleeaGle 161
                      +i+    +++ e+le+ G+ 
       EPX72503.1 210 KIRIRP-ENFPEILEQTGFH 228
                      555544.8888888888886 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4   0.0   4.9e-10   5.9e-07       3      49 ..      35      80 ..      33      91 .. 0.91
   2 !   11.0   0.0   0.00022      0.27      52     121 ..     125     197 ..     116     226 .. 0.76

  Alignments for each domain:
  == domain 1  score: 29.4 bits;  conditional E-value: 4.9e-10
  Methyltransf_31  3 kglrvlDlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaq 49
                     ++++vlD+GC++G++t + a  l++ +   GiDi+   i++A+++++
       EPX72503.1 35 ENTSVLDVGCNNGTITTQVA-SLFSVKYALGIDIDSILIKKAEKHLE 80
                     6899****************.77888889**************9864 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00022
  Methyltransf_31  52 gld.nveFeqgdiee.leklledekfDlilsnevl..naladpdkile....eiervlkpggilliedprllaelpak 121
                      g+  nv+F++ di++  +k    ++f  il+ +v    +l+ +d+ l     +++ +l+++g+l+ie  + ++ +++ 
       EPX72503.1 125 GFPhNVQFQAVDIQKwYPK----KRFQTILALSVTkwIHLNGLDEGLLnffkNMHAALETDGALIIEPQS-WDSYLKA 197
                      4444***********8884....7999***9999999777766666665666*************87666.5555444 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.0   1.5e-07   0.00018       1      42 [.      39      80 ..      39      98 .. 0.90
   2 !    7.9   0.0    0.0043       5.2      38      97 .]     118     182 ..     108     182 .. 0.71

  Alignments for each domain:
  == domain 1  score: 22.2 bits;  conditional E-value: 1.5e-07
                     EEEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHH CS
  Methyltransf_25  1 vLdlGcGtGrltlalakrlgkakvtgvDiseemleaarerae 42
                     vLd+Gc +G++t ++a  ++ +  +g+Di++ ++++a++++e
       EPX72503.1 39 VLDVGCNNGTITTQVASLFSVKYALGIDIDSILIKKAEKHLE 80
                     9******************88999**************9985 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0043
                      HHHHHHTTT..TEEEEESBCCGBSSSTTTEEEEEE..EST.GGGSS..HHHHHHHHHHHHHHEEEEE CS
  Methyltransf_25  38 reraeeegl..nvefvqgdaedlpfedgsfDlvvs..sga.lhhls..dedlekalkeiarvLkpgG 97 
                      +e ++eeg+  nv+f+  d++++  ++++f  +++  +   +h+ +  de l +++k+++ +L+ +G
       EPX72503.1 118 QEPLNEEGFphNVQFQAVDIQKWY-PKKRFQTILAlsVTKwIHL-NglDEGLLNFFKNMHAALETDG 182
                      44555677788***********95.5568888877324443443.22256778899***99999888 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0     1e-05     0.012       1      42 [.      40      81 ..      40      91 .. 0.90
   2 ?    6.0   0.0     0.017        20      41      98 ..     120     183 ..     108     184 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 1e-05
  Methyltransf_12  1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklak 42
                     L++Gc++G+++  ++  ++ +  +g+Di++  i++a+++l +
       EPX72503.1 40 LDVGCNNGTITTQVASLFSVKYALGIDIDSILIKKAEKHLEF 81
                     8****************9999999*********999888865 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.017
  Methyltransf_12  41 akrennnnnnvelealdlldldggssfDlvvasnvlhhl......kdirevldnirklLkpgGr 98 
                        +e+ + +nv+++a d+ +  +++ f +++a++v  ++      + +  +++n++++L  +G 
       EPX72503.1 120 PLNEEGFPHNVQFQAVDIQKWYPKKRFQTILALSVTKWIhlngldEGLLNFFKNMHAALETDGA 183
                      555666788999999999999999****************988888888888899999888885 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.0   5.7e-05     0.068       1      38 [.      40      79 ..      40      93 .. 0.90
   2 !    8.3   0.0    0.0029       3.5      39      96 .]     122     186 ..      93     186 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 5.7e-05
                     EEET-TTSHHHHHHHHTT..SEEEEEES-HHHHHHHHHHC CS
  Methyltransf_11  1 LdvGcGtGrlaealakrg..arvvgvDlskemlklakeka 38
                     LdvGc +G ++ ++a+ +  +  +g+D++  ++k a+++ 
       EPX72503.1 40 LDVGCNNGTITTQVASLFsvKYALGIDIDSILIKKAEKHL 79
                     8**************98899*************9998876 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.0029
                      CHHT-..EEEETTEECCCTSS-TT-EEEEEEES-CCC-......CCHHHHHHHHHHHEEEEEEEEE CS
  Methyltransf_11  39 seegl..kvefvvadaeklpfednsfDlvvssevlhhv......edpekalkeiaRvLkpgGllvi 96 
                      +eeg+  +v+f+  d++k  ++++ f  +++ +v  ++      e +  ++k+++  L+ +G l+i
       EPX72503.1 122 NEEGFphNVQFQAVDIQK-WYPKKRFQTILALSVTKWIhlngldEGLLNFFKNMHAALETDGALII 186
                      3333477899*******9.699****************7777666999**************9986 PP

>> Methyltransf_18  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.0   8.8e-07    0.0011       1      59 [.      22      80 ..      22      86 .. 0.94
   2 ?   -2.6   0.0       3.9   4.7e+03     107     125 ..     178     196 ..     167     214 .. 0.63

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 8.8e-07
  Methyltransf_18  1 lskRLkaiaslvekgsrvaDiGtDHgylpiylvkegkakkviasDinegplekakenie 59
                     l++RL+a+ + + ++++v+D+G+  g ++  +++   +k ++ +Di +  ++ka++++e
       EPX72503.1 22 LDSRLEALPKDLFENTSVLDVGCNNGTITTQVASLFSVKYALGIDIDSILIKKAEKHLE 80
                     57899999999999******************************************987 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 3.9
  Methyltransf_18 107 lkkikklilqpnseaeelR 125
                      l++   li++p+s  + l+
       EPX72503.1 178 LETDGALIIEPQSWDSYLK 196
                      4555557777776555554 PP

>> PrmA  Ribosomal protein L11 methyltransferase (PrmA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   4.4e-06    0.0053     152     203 ..      26      78 ..      23      84 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 4.4e-06
        PrmA 152 lealeklvkegeevlDvGtGSGiLai.aaakLgakkvvavDiDevAvkvakeN 203
                 leal k + e+++vlDvG+  G ++  +a+++  k ++++DiD++ +k a++ 
  EPX72503.1  26 LEALPKDLFENTSVLDVGCNNGTITTqVASLFSVKYALGIDIDSILIKKAEKH 78 
                 677777888999********996654278899***************999875 PP

>> Methyltransf_PK  AdoMet dependent proline di-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       1.4   1.7e+03      55      78 ..      35      58 ..      20      87 .. 0.66
   2 !   15.7   0.0   6.8e-06    0.0081      91     162 ..     114     189 ..     100     243 .. 0.69

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 1.4
  Methyltransf_PK 55 evkvaldcGaGiGrvtknlLlkll 78
                     e++ +ld+G+  G +t ++   + 
       EPX72503.1 35 ENTSVLDVGCNNGTITTQVASLFS 58
                     566788999999999887754443 PP

  == domain 2  score: 15.7 bits;  conditional E-value: 6.8e-06
  Methyltransf_PK  91 lekakeelae.ekkkvgkvyvvglqeftPeegrY...dliWiqWcvghLtDedlvaflkrckkalkpnGlivvken 162
                       +k +e l e +  +  ++  v +q++ P+++      l  ++W+  +  De l++f+k    al+ +G +++   
       EPX72503.1 114 QTKFQEPLNEeGFPHNVQFQAVDIQKWYPKKRFQtilALSVTKWIHLNGLDEGLLNFFKNMHAALETDGALIIEPQ 189
                      456677777744567789999********96543000445689**99999*********************99754 PP

>> Methyltransf_4  Putative methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   1.2e-05     0.014       2      45 ..      36      79 ..      35      93 .. 0.92
   2 ?   -2.0   0.0       1.8   2.2e+03      99     145 ..     170     217 ..     169     229 .. 0.63

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.2e-05
                    -EEEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHHH CS
  Methyltransf_4  2 apvvleiGcGkGeflvalAkknPdknflGiEirvkvvakvlkki 45
                    +  vl++Gc +G+++ + A  +  k  lGi+i + +++k+ k+ 
      EPX72503.1 36 NTSVLDVGCNNGTITTQVASLFSVKYALGIDIDSILIKKAEKHL 79
                    5679***********************************99876 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 1.8
                     HHHHHHHHEEEEEEEEEEES.HHHHHHHHHHHHHCSTTEEESSCCCSC CS
  Methyltransf_4  99 llkelarvLkkgGvlelaTD.veeyaeemlkvleeeplferlskeeel 145
                     + k+++ +L+  G l +    +  y + + k +  e +++++  + e+
      EPX72503.1 170 FFKNMHAALETDGALIIEPQsWDSYLKAAKKNIIFERSLSKIRIRPEN 217
                     567777888888877777665666666666666555555555555555 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   1.8e-05     0.022      24      76 ..      26      80 ..      21      93 .. 0.85
   2 ?   -1.7   0.0       1.6   1.9e+03     120     137 ..     169     186 ..     159     202 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.8e-05
                HHHCHCC..TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHH CS
         MTS 24 letlpke..lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenle 76
                le+lpk+  ++ +vlD+Gc +G +++++a+  +      +d+d   ++ a++ le
  EPX72503.1 26 LEALPKDlfENTSVLDVGCNNGTITTQVASLFSVKYALGIDIDSILIKKAEKHLE 80
                6788888776778*****************9999888899999988888888776 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.6
                 HHHHHHHHHEEEEEEEEE CS
         MTS 120 eliaeAkeaLkegGeLli 137
                 +++++ ++aL+++G L+i
  EPX72503.1 169 NFFKNMHAALETDGALII 186
                 688888999999999987 PP

>> CMAS  Mycolic acid cyclopropane synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.0    0.0035       4.2      63      93 ..      36      67 ..      23      85 .. 0.78
   2 !    6.9   0.0    0.0028       3.4     100     165 ..     116     187 ..      95     234 .. 0.79

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0035
                T-EEEEES-TTSHHHHHHHHHH--EE.EEEES CS
        CMAS 63 GmtlLdiGcGWGslvrraverydvkv.vglTl 93
                   +Ld+Gc  G+++++ ++ + vk  +g+ +
  EPX72503.1 36 NTSVLDVGCNNGTITTQVASLFSVKYaLGIDI 67
                5789******************9984256655 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0028
                 HHHHHHHTS-SSS-EEEEES-GGG---..--SEEEEES-GGGT....SGGGHHHHHHHHHHHS-TT-EEEEE CS
        CMAS 100 lakkrvdeldlerkvevklldyedlde..kvdrvvsvgafehv....gkenydtffkklkkllkedGllllh 165
                 + ++ ++e+++ ++v+ +  d +      +++ + ++ ++  +      e + +ffk+++ +l++dG l+++
  EPX72503.1 116 KFQEPLNEEGFPHNVQFQAVDIQKWYPkkRFQTILALSVTKWIhlngLDEGLLNFFKNMHAALETDGALIIE 187
                 457788999999999888777777643349999998888887744522456779**************9986 PP

>> NodS  Nodulation protein S (NodS)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.0    0.0018       2.1      45      83 ..      37      77 ..      26     102 .. 0.75
   2 ?    4.0   0.0     0.028        34      90     143 ..     129     185 ..     111     196 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0018
        NodS 45 adalevGcaaGalterlapy.c.krltvvdvveeaiarare 83
                +++l+vGc  G++t ++a + + k    +d+ +  i++a +
  EPX72503.1 37 TSVLDVGCNNGTITTQVASLfSvKYALGIDIDSILIKKAEK 77
                79**************9875131333346666666666655 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.028
        NodS  90 hiswivsdvqqfstdekfdlivvaevlyyiedv...aelraavrnlvsllapdgqlv 143
                 ++++   d+q+   +++f +i+   v  +i+     + l    +n+   l +dg l+
  EPX72503.1 129 NVQFQAVDIQKWYPKKRFQTILALSVTKWIHLNgldEGLLNFFKNMHAALETDGALI 185
                 5788899***************99999888743112446666778888888888877 PP

>> PCMT  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00024      0.29      71     119 ..      33      80 ..      18      87 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00024
                 --TT-EEEEES-TTSHHHHHHHHHHCTTCEEEEEESBHHHHHHHHHHHH CS
        PCMT  71 lkkgarvLevGsGsGyltavlarlvgekgrvvsierikelveeakrnlk 119
                 l + ++vL+vG+  G  t  +a l+  k  +++i+    l+++a+++l+
  EPX72503.1  33 LFENTSVLDVGCNNGTITTQVASLFSVKY-ALGIDIDSILIKKAEKHLE 80 
                 778899********************999.99*************9997 PP

>> Methyltransf_2  O-methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0    0.0054       6.5      60     108 ..      33      82 ..      13      87 .. 0.84
   2 ?    3.1   0.0     0.041        49     134     164 ..     156     186 ..     118     228 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0054
                     GGG-SEEEEET-TTSHHHHHHHHH-TT-EEEEEE-HHH.HHHHHHHS--- CS
  Methyltransf_2  60 leglkslvDvGGGtGalakaivsayPtikvivfDlpeV.veaAkehlsag 108
                     l + +s++DvG   G +  +++s++    ++  D+ ++ +++A++hl++ 
      EPX72503.1  33 LFENTSVLDVGCNNGTITTQVASLFSVKYALGIDIDSIlIKKAEKHLEFV 82 
                     55668899******************999999***8864899**999764 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.041
                     ESSGGGS-HHHHHHHHHHHHHH--TT-EEEE CS
  Methyltransf_2 134 krvlhDwsdekcvklLkrvkkalpagGkviv 164
                     k++     de   ++ k+++ al ++G++i+
      EPX72503.1 156 KWIHLNGLDEGLLNFFKNMHAALETDGALII 186
                     56666677899999*************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (262 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       474  (0.0264376); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 1813.07
//
Query:       EPX72504.1  [L=234]
Description: phosducin family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.4e-23   81.9   0.1    7.1e-23   80.9   0.1    1.4  2  Phosducin    Phosducin
    0.00034   20.6   0.0    0.00057   19.8   0.0    1.3  1  Thioredoxin  Thioredoxin
  ------ inclusion threshold ------
       0.22   11.6   1.7       0.48   10.5   1.7    1.6  1  Exog_C       Endo/exonuclease (EXOG) C-terminal domain


Domain annotation for each model (and alignments):
>> Phosducin  Phosducin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.17     1e+03     233     247 ..      12      26 ..       7      43 .. 0.76
   2 !   80.9   0.1   1.2e-26   7.1e-23      79     250 ..      43     209 ..      18     227 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.17
                 HHHTTT-S---XXXX CS
   Phosducin 233 flqefgllpekevlv 247
                 +l+  g+lpeke  v
  EPX72504.1  12 ILRSKGILPEKEPDV 26 
                 678889*****9766 PP

  == domain 2  score: 80.9 bits;  conditional E-value: 1.2e-26
                 ------S-HHHHHHHTT----HHHHHHHHHHHHHHHHHHH-------SEEE--SHHHHHHHHHSS-TT-EEEEEEE-TTSTTHHHHHHHHHHHHHH-TT CS
   Phosducin  79 ekisrkmslkeyelidkdkddeeflrkyrkqrmdemrqklskgprfkfvlelesgeqfldtidkeqkitlivvhiyedgvkgtealnssliclaaeypt 177
                 e+  +k +l e + ++ d +d+efl+ yr++r++e +q++sk  +++ v+ +   e   + +  + k   +vvh+++d ++ ++ ln+ l  la  yp 
  EPX72504.1  43 ENRLEKKTLDELDELE-DEEDDEFLQIYRNKRIEEWKQRMSKA-KYGAVYPISKPEYT-KEVTEDSKNVFVVVHMFQDSIPACKLLNGILERLAPMYPQ 138
                 4444677999999987.567788*****************995.9*******888755.5566788999****************************** PP

                 SEEEEEEHHHH--TTSS-TTT-SEEEEEETTEEEEEETTGGGGS-TT--HHHHHHHHHTTT-S---XXXXXXX CS
   Phosducin 178 vkfckvkasvigasdrfsrdvlpallvykagellsnfvrvtdqlaedffavdleaflqefgllpekevlvles 250
                 +kf k+      a + +   ++p+llvy  g+l  +f+++t   +      d+   l   g l e ++  l +
  EPX72504.1 139 IKFVKIAGK--QAVENYPDIMMPTLLVYGHGDLQQQFLTLTTLGGMGTTVYDVAKALVHAGALKEEDIAPLRE 209
                 ***999765..68999*************************99999999999999999999999999887765 PP

>> Thioredoxin  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   9.6e-08   0.00057       4      88 ..      91     173 ..      88     183 .. 0.83

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 9.6e-08
                  ESSHHHHHHHHTT..TSSEEEEEEE-TTSHHHHCHHHHHHHHHHHCTTTSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTEEEEEE CS
  Thioredoxin   4 vltkenFeeevak..ekklvlveFyApwCghCkalaPeleklaeelkdkvklakvdvdenedlakkyevegiPtlklfkngkevkky 88 
                   ++k ++ +ev +  ++  v+v  + +  + Ck l++ le+la  +  ++k++k+  ++    +++y   ++Ptl+++ +g+ ++++
   EPX72504.1  91 PISKPEYTKEVTEdsKNVFVVVHMFQDSIPACKLLNGILERLAPMYP-QIKFVKIAGKQA---VENYPDIMMPTLLVYGHGDLQQQF 173
                  56788999999995445567999************************.******987766...45555579*********9977665 PP

>> Exog_C  Endo/exonuclease (EXOG) C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   1.7     8e-05      0.48      22      49 .]      44      72 ..      41      72 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 8e-05
      Exog_C 22 kRLek.vmkeLkeagiepDeyLlklYkkK 49
                +RLek  + eL e + e D+++l++Y +K
  EPX72504.1 44 NRLEKkTLDELDELEDEEDDEFLQIYRNK 72
                6898548*******************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (234 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       888  (0.0495287); expected 358.6 (0.02)
Passed bias filter:                      542  (0.0302304); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.29s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 1675.09
//
Query:       EPX72505.1  [L=215]
Description: SNARE Sec22 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.9e-25   87.7   0.0    6.8e-25   86.9   0.0    1.3  1  Longin           Regulated-SNARE-like domain
    8.8e-17   60.7   0.0    1.2e-16   60.2   0.0    1.2  1  Synaptobrevin    Synaptobrevin
  ------ inclusion threshold ------
       0.11   13.2   0.0       0.22   12.2   0.0    1.5  1  Vir_act_alpha_C  Virulence activator alpha C-term


Domain annotation for each model (and alignments):
>> Longin  Regulated-SNARE-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.9   0.0   1.1e-28   6.8e-25       1      83 [.      35     115 ..      35     115 .. 0.95

  Alignments for each domain:
  == domain 1  score: 86.9 bits;  conditional E-value: 1.1e-28
      Longin   1 aklilkkishsspqkltythdsytfhylaedgltylviadesyprrlaFafLeeikreFlakygtaktadaadlrpyafaeFd 83 
                 aklilk++++ss+ +++++ ++y fhy++++g++yl+i+d+sypr+laF++Lee++ eF  +yg  ++a ++ lrp+af +Fd
  EPX72505.1  35 AKLILKRLTPSSERQASIEAGDYSFHYVIDHGISYLCICDRSYPRKLAFSYLEELAVEFWGTYG--EEALQPGLRPFAFVQFD 115
                 89*******999*******888******************************************..445899**********8 PP

>> Synaptobrevin  Synaptobrevin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.2   0.0   2.1e-20   1.2e-16       2      82 ..     131     211 ..     130     215 .] 0.95

  Alignments for each domain:
  == domain 1  score: 60.2 bits;  conditional E-value: 2.1e-20
                    XXHHHHHHHHHHCCCCHHCCHHHHCHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHTXXXXXXXXXXXXXXXXX CS
  Synaptobrevin   2 ndklakikaevdevkdimkeNidkvlergekldeLvdktenLqssaqqFkkqarklkrkmwwknmkliiililvvlilili 82 
                    nd+l+k+++e+++v+++m++Ni+++l rg+ l++++d +++L+ s+ ++kk ar+++ + +wk++  + i+++++++li+ 
     EPX72505.1 131 NDNLDKLNTELKDVTRVMTKNIEDLLYRGDSLEKMSDLSSDLRFSSAKYKKAARRVNLEALWKQYGPVSIIVFLFVVLIYW 211
                    899**************************************************************9999999999988875 PP

>> Vir_act_alpha_C  Virulence activator alpha C-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   3.7e-05      0.22      11      61 ..      15      69 ..      13      70 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 3.7e-05
  Vir_act_alpha_C 11 aaavldpealieeLerrreeheekLaeyeeieerl....eeargqylvLrrgiry 61
                     +aa +d e + ++Le ++++++  L++++ + er     + +   + v+++gi+y
       EPX72505.1 15 LAASVDDESTERKLESHKKQAKLILKRLTPSSERQasieAGDYSFHYVIDHGISY 69
                     6899*************************88888878876688888899999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       669  (0.0373138); expected 358.6 (0.02)
Passed bias filter:                      488  (0.0272185); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1588.05
//
Query:       EPX72506.1  [L=68]
Description: hypothetical protein SOCG_00269 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       354  (0.0197445); expected 358.6 (0.02)
Passed bias filter:                      189  (0.0105416); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.25s 00:00:00.59 Elapsed: 00:00:00.39
# Mc/sec: 528.13
//
Query:       EPX72507.1  [L=246]
Description: zf-PARP type zinc finger protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.3e-23   80.9   0.1    9.3e-23   80.9   0.1    2.1  2  zf-PARP   Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finge


Domain annotation for each model (and alignments):
>> zf-PARP  Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.9   0.1   5.2e-27   9.3e-23       1      81 [.      11      95 ..      11      96 .. 0.94
   2 ?   -2.2   1.3      0.44   7.9e+03      51      51 ..     158     158 ..     115     187 .. 0.58

  Alignments for each domain:
  == domain 1  score: 80.9 bits;  conditional E-value: 5.2e-27
                EE-S-S--B-SS..S-.-B--SSSEEEEE-...------EEEEHHHHHTSSS--S-GGG.......EETTTTS-H.HHHHHHHHH CS
     zf-PARP  1 EyAksgrakCkk..Ck.kkIakgelRlgkkveieeseskrWyHvgCftekqiknkketkeieeeeeiegfeeLek.edqekvrda 81
                E+Ak+gra+Ck+  C  +kI++g+lR+g+ v+  +++s+ W+H+gC+te+ i+n +++ e +  ++++gf+e+e+ e q+k+++a
  EPX72507.1 11 EIAKTGRAGCKSnlCGrSKIERGQLRFGSFVDSGRFQSWMWRHWGCVTERVIQNVETKLEGNIVDNLDGFDEIEDeEVQQKIIRA 95
                89************999*****************************************987777**********96779999987 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.44
                 - CS
     zf-PARP  51 n 51 
                 n
  EPX72507.1 158 N 158
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1749  (0.0975515); expected 358.6 (0.02)
Passed bias filter:                      561  (0.0312901); expected 358.6 (0.02)
Passed Vit filter:                       115  (0.00641419); expected 17.9 (0.001)
Passed Fwd filter:                        38  (0.00211947); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.83u 0.34s 00:00:01.17 Elapsed: 00:00:00.51
# Mc/sec: 1448.78
//
Query:       EPX72508.1  [L=258]
Description: di-trans,poly-cis-decaprenylcistransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.9e-07   29.0   0.5    1.6e-06   27.8   0.0    1.9  2  Prenyltransf  Putative undecaprenyl diphosphate synthase
  ------ inclusion threshold ------
      0.048   14.1   0.0       0.34   11.3   0.0    2.1  2  DUF5099       Domain of unknown function (DUF5099)
      0.067   13.6   0.0       0.31   11.5   0.0    1.9  2  PolyA_pol     Poly A polymerase head domain


Domain annotation for each model (and alignments):
>> Prenyltransf  Putative undecaprenyl diphosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.6      0.53   3.2e+03     180     215 ..       4      41 ..       3      48 .. 0.72
   2 !   27.8   0.0   2.7e-10   1.6e-06      92     224 .]     127     257 ..      94     257 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.53
                   S-TTSSTTTTTT-E..EEEESSSGGG--HHHHHHHHHH CS
  Prenyltransf 180 RlSnFllwqlayse..lyfldvlWPdfskedllealle 215
                   Rl  Fl++ l+++   +y++++ W   +++ ll+ l +
    EPX72508.1   4 RLLYFLVYWLIHKAfsVYVSSENWISWGSNYLLNFLYH 41 
                   66668887777777778888888888888777777765 PP

  == domain 2  score: 27.8 bits;  conditional E-value: 2.7e-10
                   GGGS-HHHHHHHHHHHHHHT.TTTSEEEEEEEEE-HHHHHHHHHHHHHHTT..SSSG.GGHSHHHHHCTSTT..TSSS-SEEEEESS--S-TTSSTT CS
  Prenyltransf  92 lellpedvlealekaeeatkknnkklvlniavnYgsrdeiveavrelvkekseekkk.eeideetlekhlytakalpdpDlliRtsGeeRlSnFllw 187
                   +e+   +v+++++++e++ +   k+l+++++ +  +rd i++ +r l++ ++++  + ++++++ ++k+l   + +p+pDlli  s   +l +F  w
    EPX72508.1 127 REKCVVQVRNSCSNTEQEQQ-VPKDLTVHLIAEEDGRDAIIDLTRGLADLTKKKVITsAQVTQDLIDKELTE-SVIPEPDLLIVFSPYLKLQGFPPW 221
                   55556678889999999988.5556******************99996655433333244578889999986.447********************* PP

                   TTTT-EEEEESSSGGG--HHHHHHHHHHHHHCHHHTT CS
  Prenyltransf 188 qlayselyfldvlWPdfskedllealleyqkrerrfg 224
                   ql   e +f d ++   s  ++++al++y++ e r+g
    EPX72508.1 222 QLRLCE-IFHDPIFTSPSYLSFYKALTRYSTAEMRLG 257
                   *77666.58999******************9998875 PP

>> DUF5099  Domain of unknown function (DUF5099)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.16   9.7e+02      15      67 ..      22      73 ..      11      77 .. 0.76
   2 ?   11.3   0.0   5.7e-05      0.34      36     109 .]     179     257 ..     143     257 .. 0.74

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.16
     DUF5099 15 vskeeikklkkkygikivkligekkdkvlikeeidfenksvlpdlvilcndkl 67
                vs+e+  + +++y ++++   ++++d +   +++++++k  + ++++ c d +
  EPX72508.1 22 VSSENWISWGSNYLLNFLYHHHCSRDLIRR-DTVKLKKKPRHLSVILECRDNT 73
                556666666677777877777787776665.9999999999999999998865 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 5.7e-05
     DUF5099  36 gekkdkvlikeeidf...enksvlpdlvilcndklvFklksplllykaEilfkrkdf..sedvlvkaLehYseCeirnG 109
                 +  +    +++ id    e     pdl+i  +  l+ +   p  l  +Ei++       s   ++kaL+ Ys  e+r G
  EPX72508.1 179 KVITSAQVTQDLIDKeltESVIPEPDLLIVFSPYLKLQGFPPWQLRLCEIFHDPIFTspSYLSFYKALTRYSTAEMRLG 257
                 4444445556666663323333479***************************976541145579*********999866 PP

>> PolyA_pol  Poly A polymerase head domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.32   1.9e+03      85      95 ..      42      52 ..      31      54 .. 0.83
   2 ?   11.5   0.0   5.2e-05      0.31      84     125 ..     139     180 ..     118     181 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.32
                .HHHHHHCTSS CS
   PolyA_pol 85 esleeDlkrRD 95
                ++++ Dl+rRD
  EPX72508.1 42 HHCSRDLIRRD 52
                57889*****9 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 5.2e-05
                 ..HHHHHHCTSSBGGGS-EEECTTTCEE-TTSHHHHHHTTEE CS
   PolyA_pol  84 tesleeDlkrRDftiNalaynlnkgkvlDlfgGikdLkskvi 125
                 +++ +e  + +D+t+  +a +  +++++Dl+ G++dL +k++
  EPX72508.1 139 SNTEQEQQVPKDLTVHLIAEEDGRDAIIDLTRGLADLTKKKV 180
                 44667777889**************************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (258 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       590  (0.0329076); expected 358.6 (0.02)
Passed bias filter:                      511  (0.0285013); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 1832.79
//
Query:       EPX72509.1  [L=200]
Description: transporter Tvp23 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.5e-50  170.9   9.1      2e-50  170.4   9.1    1.2  1  DUF846           Eukaryotic protein of unknown function (DUF8


Domain annotation for each model (and alignments):
>> DUF846  Eukaryotic protein of unknown function (DUF846)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  170.4   9.1   1.1e-54     2e-50       1     139 []      27     165 ..      27     165 .. 0.99

  Alignments for each domain:
  == domain 1  score: 170.4 bits;  conditional E-value: 1.1e-54
      DUF846   1 shpvallfhllfklaailvylfgslfsnsfilkfvvlilllaldfwvvknisGrlLvgLrwwnevdedgeskwvFesrdekrkvnkidsklFWlllyvt 99 
                 shp++l+f+l+f+++ai++y++g lf++sf+l f++++ lla+d+w+vkn+sGrlLvgLrw ne+  dges w+Fes+d++r+ nkid+k+FW+ ly+ 
  EPX72509.1  27 SHPIVLFFFLFFRTSAIVAYILGMLFTSSFMLLFILIFTLLAMDLWTVKNVSGRLLVGLRWRNETGVDGESIWIFESADPNRPRNKIDQKVFWYGLYIY 125
                 6************************************************************************************************** PP

      DUF846 100 pllwvvllilailslkllwlllviialvlsltnlygftkC 139
                 p++w++l+ila++++++lwl lv+i+++l+++n+ ++ +C
  EPX72509.1 126 PAIWCLLAILALVRFQFLWLSLVAIGVSLTSVNTAAYSRC 165
                 ***************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       990  (0.0552178); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.29s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 1322.92
//
Query:       EPX72510.1  [L=721]
Description: sir antagonist [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.9e-13   49.5  22.0    4.5e-12   46.1   8.6    2.3  2  zf-RING_2        Ring finger domain
    6.4e-08   32.5   5.1    6.4e-08   32.5   5.1    2.6  2  zf-RING_UBOX     RING-type zinc-finger
    1.9e-07   30.8  16.9      5e-06   26.2   8.4    2.6  2  zf-C3HC4_2       Zinc finger, C3HC4 type (RING finger)
    4.3e-07   29.7  16.5    1.1e-06   28.4   6.4    2.3  2  zf-C3HC4_3       Zinc finger, C3HC4 type (RING finger)
    2.1e-06   27.6  18.9     0.0012   18.8   6.3    2.3  2  zf-RING_5        zinc-RING finger domain
    2.1e-05   24.3   5.1    2.1e-05   24.3   5.1    3.3  3  Prok-RING_4      Prokaryotic RING finger family 4
    3.7e-05   23.5  20.5    0.00086   19.1   8.0    2.4  2  zf-C3HC4         Zinc finger, C3HC4 type (RING finger)
     0.0001   22.5   8.0     0.0001   22.5   8.0    2.8  2  zf-rbx1          RING-H2 zinc finger domain
     0.0015   18.2   0.4     0.0015   18.2   0.4    2.5  2  zf-RING_11       RING-like zinc finger
  ------ inclusion threshold ------
      0.031   14.1  19.0       0.33   10.8   3.2    2.3  2  zf-RING_4        RING/Ubox like zinc-binding domain
      0.064   12.6   0.1      0.064   12.6   0.1    2.9  3  Rtf2             Rtf2 RING-finger
       0.39   10.8  13.7       0.84    9.7   5.1    2.7  2  zf-ANAPC11       Anaphase-promoting complex subunit 11 RING-H
       0.58    8.5   6.1        1.2    7.4   6.1    1.5  1  Menin            Menin
        1.4    8.6  15.0        3.4    7.4   2.5    2.3  2  Zn_ribbon_17     Zinc-ribbon, C4HC2 type
        2.5    8.3  10.4       0.23   11.6   1.7    2.4  2  zf-UDP           Zinc-binding RING-finger
          8    6.7  15.0        3.3    8.0   7.1    2.9  2  zf-C3HC4_4       zinc finger of C3HC4-type, RING


Domain annotation for each model (and alignments):
>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.1   8.6     4e-15   4.5e-12       2      44 .]     112     156 ..     111     156 .. 0.88
   2 !    9.2   5.4    0.0014       1.6      15      44 .]     681     716 ..     668     716 .. 0.72

  Alignments for each domain:
  == domain 1  score: 46.1 bits;  conditional E-value: 4e-15
   zf-RING_2   2 eCpICleelssadsvl..llpCgHvfhreClerwlrssstCPlCr 44 
                 +CpIC+++++ ++++   ++pCgH+f+++Cl+ wl+ +++CPlCr
  EPX72510.1 112 SCPICYDDMNVDEETSatRMPCGHIFGKNCLKIWLEDHCSCPLCR 156
                 8********77777553377************************9 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.0014
   zf-RING_2  15 svlllpCgHvfhreClerwlrssst.......CPlCr 44 
                 + l  +CgH  h++C ++   ++ +       CP Cr
  EPX72510.1 681 RFLHFECGHRVHESCYRDSP-ENGQmdeiddqCPRCR 716
                 444446**********8853.33334678889****9 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.5   5.1   5.7e-11   6.4e-08       1      39 []     113     153 ..     113     153 .. 0.86
   2 ?    3.0   2.6     0.095   1.1e+02      15      26 ..     686     699 ..     662     716 .. 0.71

  Alignments for each domain:
  == domain 1  score: 32.5 bits;  conditional E-value: 5.7e-11
  zf-RING_UBOX   1 CpIClelft......dPlvlpCGHtFCreClwelskslegafkCP 39 
                   CpIC+++++        + +pCGH+F ++Cl   + +le++ +CP
    EPX72510.1 113 CPICYDDMNvdeetsA-TRMPCGHIFGKNCL---KIWLEDHCSCP 153
                   *********9876431.3359**********...999*******9 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.095
  zf-RING_UBOX  15 pCGHtFCreCl..w 26 
                   +CGH  +++C    
    EPX72510.1 686 ECGHRVHESCYrdS 699
                   7*********9431 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   8.4   4.5e-09     5e-06       2      40 .]     113     155 ..     112     155 .. 0.82
   2 !    9.2   1.3   0.00095       1.1      15      40 .]     684     715 ..     679     715 .. 0.73

  Alignments for each domain:
  == domain 1  score: 26.2 bits;  conditional E-value: 4.5e-09
  zf-C3HC4_2   2 CpiCldml...kdpsvvt.pCgHvfCqkCilrsLeekneCPlC 40 
                 CpiC+d +   +++s +  pCgH f ++C++ +Le++ +CPlC
  EPX72510.1 113 CPICYDDMnvdEETSATRmPCGHIFGKNCLKIWLEDHCSCPLC 155
                 *****98833334444447************************ PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00095
  zf-C3HC4_2  15 vtpCgHvfCqkCilrs.....Leekn.eCPlC 40 
                  ++CgH+ +++C + s     ++e + +CP C
  EPX72510.1 684 HFECGHRVHESCYRDSpengqMDEIDdQCPRC 715
                 579**********9763333355656689988 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.4   6.4   9.7e-10   1.1e-06       2      47 ..     110     159 ..     109     161 .. 0.91
   2 !    6.7   2.5    0.0058       6.5      15      48 ..     682     720 ..     674     721 .] 0.80

  Alignments for each domain:
  == domain 1  score: 28.4 bits;  conditional E-value: 9.7e-10
                 GSB-TTTSS.....SBS-EEETTEEEEEE-HHHHHHHHHTT-B-TTT--B- CS
  zf-C3HC4_3   2 deeCviCle.....rprnvvllpCgHlvlCeeCaekllkrkkkCpiCrrpi 47 
                 d+ C+iC++     ++ +++ +pCgH+ + ++C++ +l+ +++Cp+Cr+++
  EPX72510.1 110 DQSCPICYDdmnvdEETSATRMPCGHI-FGKNCLKIWLEDHCSCPLCRKEV 159
                 789******7776669999********.*********************98 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0058
                 EEETTEEEEEE-HHHHHHHHH......TT-B-TTT--B-- CS
  zf-C3HC4_3  15 vvllpCgHlvlCeeCaekllk......rkkkCpiCrrpie 48 
                 ++  +CgH  + e+C ++  +       +++Cp Cr++ e
  EPX72510.1 682 FLHFECGHR-VHESCYRDSPEngqmdeIDDQCPRCRQQKE 720
                 56679****.8899999888788888899*******9865 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   6.3     1e-06    0.0012       2      44 .]     113     157 ..     112     157 .. 0.94
   2 !   14.5   4.7   2.3e-05     0.026      10      44 .]     677     717 ..     666     717 .. 0.91

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 1e-06
   zf-RING_5   2 CnkCfekl..skeekfyltsCgHifCekClkkllekeavCpiCrk 44 
                 C++C++ +   +e  +  ++CgHif ++Clk  le    Cp+Crk
  EPX72510.1 113 CPICYDDMnvDEETSATRMPCGHIFGKNCLKIWLEDHCSCPLCRK 157
                 ********9888888*******************99999****97 PP

  == domain 2  score: 14.5 bits;  conditional E-value: 2.3e-05
   zf-RING_5  10 skeekfyltsCgHifCekClkkll......ekeavCpiCrk 44 
                 +++++f   +CgH ++e+C + +       e +++Cp Cr+
  EPX72510.1 677 NPNDRFLHFECGHRVHESCYRDSPengqmdEIDDQCPRCRQ 717
                 67999**********************************97 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.4      0.02        22      28      40 ..     106     120 ..     101     125 .. 0.73
   2 !   24.3   5.1   1.9e-08   2.1e-05      10      42 ..     127     161 ..     121     164 .. 0.83
   3 ?    4.9   3.5     0.022        24      16      39 ..     687     718 ..     675     721 .] 0.83

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.02
  Prok-RING_4  28 kdls..sCPlCqrri 40 
                  ++ls  sCP+C   +
   EPX72510.1 106 EQLSdqSCPICYDDM 120
                  5666669****8765 PP

  == domain 2  score: 24.3 bits;  conditional E-value: 1.9e-08
  Prok-RING_4  10 kailepCgHlvCkeCfdsk..dlssCPlCqrrisk 42 
                   a   pCgH++ k+C++ +  d+ sCPlC++++ +
   EPX72510.1 127 SATRMPCGHIFGKNCLKIWleDHCSCPLCRKEVPH 161
                  55668************9987888********854 PP

  == domain 3  score: 4.9 bits;  conditional E-value: 0.022
  Prok-RING_4  16 CgHlvCkeCfdskdls........sCPlCqrr 39 
                  CgH v ++C+ ++  +        +CP C+++
   EPX72510.1 687 CGHRVHESCYRDSPENgqmdeiddQCPRCRQQ 718
                  ***********9966556789999*****987 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   8.0   7.7e-07   0.00086       1      41 []     113     155 ..     113     155 .. 0.93
   2 !   10.0   4.6   0.00053       0.6      13      41 .]     683     715 ..     668     715 .. 0.86

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 7.7e-07
                 -TTT-S--SS-E.....E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepn....elleCkHsfCskCirkilksrkkvkCPlC 41 
                 CpiC + +        + ++C+H f ++C++ +l+   +++CPlC
  EPX72510.1 113 CPICYDDMNVDEetsaTRMPCGHIFGKNCLKIWLE--DHCSCPLC 155
                 *****9998877788999*****************..99****** PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00053
                 .E-TTS--B-CHHHHHHHHC....TSSB--TTT CS
    zf-C3HC4  13 elleCkHsfCskCirkilks....rkkvkCPlC 41 
                    eC+H+++++C+r   ++    +   +CP C
  EPX72510.1 683 LHFECGHRVHESCYRDSPENgqmdEIDDQCPRC 715
                 5689***************9999877888***9 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   8.0     9e-08    0.0001      11      55 .]     110     156 ..     103     156 .. 0.80
   2 ?    4.7   3.4     0.033        37      15      55 .]     666     716 ..     660     720 .. 0.76

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 9e-08
     zf-rbx1  11 eeacieckapgdee..cpvvlGeCgHaFHlhCiskWlktrkvCPlcr 55 
                 ++ c+ c  + + +  ++ +   CgH F ++C++ Wl+ + +CPlcr
  EPX72510.1 110 DQSCPICYDDMNVDeeTSATRMPCGHIFGKNCLKIWLEDHCSCPLCR 156
                 56777776554443447777889***********************8 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.033
     zf-rbx1  15 ieckapgdeecpvv....lGeCgHaFHlhCiskWlkt......rkvCPlcr 55 
                 ++c+ +++ +c++       eCgH  H  C ++  ++       ++CP cr
  EPX72510.1 666 LQCQLEDQGSCNPNdrflHFECGHRVHESCYRDSPENgqmdeiDDQCPRCR 716
                 567776666655431111359**********99999999999999999997 PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.4   1.4e-06    0.0015       2      28 ..     113     141 ..     112     142 .. 0.82
   2 ?    1.8   2.5      0.19   2.1e+02      11      28 ..     678     695 ..     674     696 .. 0.81

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 1.4e-06
  zf-RING_11   2 CsICLeefkpgq..alfilpCsHtFHfkC 28 
                 C IC +++ +++  + + +pC+H+F  +C
  EPX72510.1 113 CPICYDDMNVDEetSATRMPCGHIFGKNC 141
                 *********6663466788******9999 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.19
  zf-RING_11  11 pgqalfilpCsHtFHfkC 28 
                 p+++    +C+H  H  C
  EPX72510.1 678 PNDRFLHFECGHRVHESC 695
                 566667779*******99 PP

>> zf-RING_4  RING/Ubox like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   8.0    0.0013       1.4       1      46 [.     113     158 ..     113     159 .. 0.80
   2 ?   10.8   3.2    0.0003      0.33      15      46 ..     682     718 ..     671     719 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0013
   zf-RING_4   1 cplCdeeldet.dkdlkpCeCgyqiClfCyhrileeeegrCPaCree 46 
                 cp+C ++++ + +++ +  +Cg+ +   C++  l e +  CP Cr+e
  EPX72510.1 113 CPICYDDMNVDeETSATRMPCGHIFGKNCLKIWL-EDHCSCPLCRKE 158
                 9*******544045566679*********98666.56********96 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.0003
   zf-RING_4  15 lkpCeCgyqiClfCyhrileee.....egrCPaCree 46 
                 +   eCg+++   Cy++  e+      + +CP Cr++
  EPX72510.1 682 FLHFECGHRVHESCYRDSPENGqmdeiDDQCPRCRQQ 718
                 55669************99954444559*******85 PP

>> Rtf2  Rtf2 RING-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   5.7e-05     0.064     111     163 ..     107     162 ..      88     190 .. 0.77
   2 ?   -4.0   3.7       6.5   7.3e+03     183     183 ..     556     556 ..     419     624 .. 0.66
   3 ?   -0.1   0.3      0.42   4.7e+02     112     159 ..     663     718 ..     647     721 .] 0.72

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 5.7e-05
        Rtf2 111 keapfiCpltglemngktkfval.rkCGcVfsekalkevk..sevClvCgkeykee 163
                 + +   Cp+   +mn  ++  a  ++CG++f ++ lk     +  C+ C ke  +e
  EPX72510.1 107 QLSDQSCPICYDDMNVDEETSATrMPCGHIFGKNCLKIWLedHCSCPLCRKEVPHE 162
                 445567********977766555169***********9973445599***998766 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 6.5
        Rtf2 183 e 183
                 e
  EPX72510.1 556 E 556
                 1 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.42
        Rtf2 112 eapfiCpltgl.emngktkfvalrkCGcVfsekalkevksev........ClvCgke 159
                 +++ +C l  + + n++ +f+   +CG+ + e+  ++  ++         C+ C ++
  EPX72510.1 663 STKLQCQLEDQgSCNPNDRFLHF-ECGHRVHESCYRDSPENGqmdeiddqCPRCRQQ 718
                 55666777654256889999865.8***********99733333555666***9875 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   5.1   0.00075      0.84      34      80 ..     112     158 ..     102     162 .. 0.73
   2 ?    5.2   1.3      0.02        22      49      80 ..     684     718 ..     668     721 .] 0.77

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00075
                 --TTCS..TTTT.TS-EEEBTTS-EEEHHHHHHHHHHHSTSSB-TTTSSB CS
  zf-ANAPC11  34 tcpsck..fpGd.dcplvlGkckhnfhlhcilkwletetskglcpmcrqt 80 
                 +cp c   +  d + +     c h+f + c+  wle + s   cp+cr++
  EPX72510.1 112 SCPICYddMNVDeETSATRMPCGHIFGKNCLKIWLEDHCS---CPLCRKE 158
                 677774223333144555556**************99765...****987 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.02
                 EBTTS-EEEHHHHHHHHH...HHSTSSB-TTTSSB CS
  zf-ANAPC11  49 lGkckhnfhlhcilkwle...tetskglcpmcrqt 80 
                   +c h  h+ c     e    ++  ++cp crq+
  EPX72510.1 684 HFECGHRVHESCYRDSPEngqMDEIDDQCPRCRQQ 718
                 557*********987665111566789******97 PP

>> Menin  Menin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   6.1    0.0011       1.2     444     594 ..     481     633 ..     471     671 .. 0.58

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0011
       Menin 444 eaeqaaaaeaaaaeaaededaaseea..leGnrrrgprreskkeeksksseqlPttladltaacgekilnp.dfllqggdqplaeqkqkkagees.err 538
                 +ae aaa++++a ea+ ++d+ +e+    e     ++ ++ ++e++s  s+ lPt l +l +  g++i+   +  ++   +  +eq q++++++  +++
  EPX72510.1 481 NAEGAAANSTNAGEAESTNDEPNEARnvPETGATGASTSLENNENRSGLSSVLPTGLRHL-SEMGQRIVRRfQEEFENRVRQTGEQSQQRSTARDaTPS 578
                 5788888777887777766665554433555567778888999999************96.56788877531333344444456666655555440444 PP

       Menin 539 eannnnnsksnsekeadkk............asttsnggeasstpsseseaavespsehkeakleeks 594
                 +++   ++  n+++ ++ +                          +s  + +v++pse   +   e+s
  EPX72510.1 579 QSQRSSEVTVNNDEPSQSElpsvesagvideD-------------NSVGQVSVSTPSEAITSDAGETS 633
                 44444444444444444443333333444440.............44444455555544443333333 PP

>> Zn_ribbon_17  Zinc-ribbon, C4HC2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   4.9    0.0056       6.2       5      46 ..     111     153 ..     107     156 .. 0.72
   2 ?    7.4   2.5     0.003       3.4      20      42 ..     683     705 ..     667     716 .. 0.76

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0056
  Zn_ribbon_17   5 ksCayC..elavkgrvv.lcgvCeHvlHasCarewfenddlaeCp 46 
                   +sC +C  +++v   +      C+H+  ++C++ w+e     +Cp
    EPX72510.1 111 QSCPICydDMNVDEETSaTRMPCGHIFGKNCLKIWLEDHC--SCP 153
                   6777774456676655404467*************99766..777 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.003
  Zn_ribbon_17  20 lcgvCeHvlHasCarewfenddl 42 
                   l  +C+H +H+sC+r+  en+++
    EPX72510.1 683 LHFECGHRVHESCYRDSPENGQM 705
                   5568***********98888772 PP

>> zf-UDP  Zinc-binding RING-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   1.7   0.00021      0.23       4      60 ..     106     159 ..     104     167 .. 0.87
   2 ?    1.0   1.8      0.42   4.7e+02      31      58 ..     685     717 ..     668     721 .] 0.75

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00021
      zf-UDP   4 kdlngqiCqiCgddvgltedgelFvacnecafpvcrpcyeyerkdgnqsCPqCktry 60 
                 ++l+ q C iC dd+++  d e+ +  + c+    ++c++    d   sCP C+ ++
  EPX72510.1 106 EQLSDQSCPICYDDMNV--DEETSATRMPCGHIFGKNCLKIWLEDH-CSCPLCRKEV 159
                 68999********9876..66778999**************99998.89****9876 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.42
      zf-UDP  31 necafpvcrpcyeyerk.....dgnqsCPqCkt 58 
                  ec+  v  +cy          +  + CP+C+ 
  EPX72510.1 685 FECGHRVHESCYRDSPEngqmdEIDDQCPRCRQ 717
                 579999999999777663444455679****86 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   7.1    0.0029       3.3       1      42 []     113     155 ..     113     155 .. 0.77
   2 ?    2.5   0.9      0.15   1.7e+02      14      42 .]     685     715 ..     683     715 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0029
  zf-C3HC4_4   1 CPiCldYL.....ekPvsleCGhsfClsCisslqkepdgeqllCplC 42 
                 CPiC d +     +  + ++CGh+f  +C++ + ++      +CplC
  EPX72510.1 113 CPICYDDMnvdeeTSATRMPCGHIFGKNCLKIWLEDH----CSCPLC 155
                 88888877333222457799**********9999887....78***9 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.15
  zf-C3HC4_4  14 leCGhsfClsCisslqkepdgeq..llCplC 42 
                  eCGh +  sC   + ++ +  +   +Cp C
  EPX72510.1 685 FECGHRVHESCYRDSPENGQMDEidDQCPRC 715
                 59*********99987765433323789988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (721 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       846  (0.0471861); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                        22  (0.00122706); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.69u 0.33s 00:00:01.02 Elapsed: 00:00:00.50
# Mc/sec: 4378.97
//
Query:       EPX72511.1  [L=430]
Description: WD40/YVTN repeat-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.4e-08   35.3   4.6    7.6e-05   23.4   0.1    5.2  5  WD40         WD domain, G-beta repeat
     0.0011   19.3   0.0       0.24   11.7   0.0    3.7  5  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       1.3   1.2e+04      10      32 ..     221     244 ..     213     246 .. 0.62
   2 ?    2.5   0.0     0.034     3e+02       4      31 ..     257     284 ..     254     289 .. 0.81
   3 !   23.4   0.1   8.5e-09   7.6e-05       9      38 .]     302     332 ..     292     332 .. 0.81
   4 ?    1.2   0.0     0.087   7.8e+02       3      26 ..     339     363 ..     338     370 .. 0.84
   5 !    5.0   0.1    0.0056        50      13      32 ..     391     410 ..     373     412 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1.3
                 S.SSEEEEEEETTSSEEEEEETTS CS
        WD40  10 H.ssvtslafspdgawlasGsdDg 32 
                 H  sv+++    +++ ++ G+ Dg
  EPX72511.1 221 HdESVNHIEILNYKDSVVLGCNDG 244
                 755688886555555544366676 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.034
                 EEEEESSSSEEEEEEETTSSEEEEEETT CS
        WD40   4 lrtltGHssvtslafspdgawlasGsdD 31 
                 + +++G + v+s   spd + l+ +sd 
  EPX72511.1 257 QMVFSGTDAVNSTHPSPDLSQLLICSDS 284
                 6789999779999999999999999944 PP

  == domain 3  score: 23.4 bits;  conditional E-value: 8.5e-09
                 SS.SSE.EEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   9 GH.ssv.tslafspdgawlasGsdDgtvriWd 38 
                  H +sv t+  ++p+g+ la+G+ D t +iWd
  EPX72511.1 302 SHyDSVlTGA-WHPNGQILATGGQDTTFKIWD 332
                 4666664444.********************9 PP

  == domain 4  score: 1.2 bits;  conditional E-value: 0.087
                 EEEEEESS.SSEEEEEEETTSSEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawla 26 
                 ++rtl  + s +t + fs+ g  la
  EPX72511.1 339 PIRTLGSQmSAITNVIFSSTGESLA 363
                 57899888899****9999998886 PP

  == domain 5  score: 5.0 bits;  conditional E-value: 0.0056
                 EEEEEEETTSSEEEEEETTS CS
        WD40  13 vtslafspdgawlasGsdDg 32 
                 +++ +fsp+g+ ++ G dD+
  EPX72511.1 391 ISGASFSPSGDTFVVGLDDP 410
                 88999********9998787 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.22     2e+03      36      69 ..     220     253 ..     207     262 .. 0.77
   2 ?    1.3   0.0     0.048   4.3e+02      27      79 ..     257     304 ..     233     309 .. 0.70
   3 !   11.7   0.0   2.7e-05      0.24      39      67 ..     305     333 ..     271     342 .. 0.83
   4 ?    1.1   0.0     0.055   4.9e+02      37      68 ..     346     377 ..     338     384 .. 0.86
   5 ?   -2.2   0.0       0.6   5.4e+03      40      59 ..     390     409 ..     389     413 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.22
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaes 69 
                   +d++v++++  +     + +++dg v l ++e+
   EPX72511.1 220 MHDESVNHIEILNYKDSVVLGCNDGLVALENIEK 253
                  5677777777777777888999999999888775 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.048
  ANAPC4_WD40  27 qrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvk 79 
                  q+v+++        v+s + +pd + L +  +  +v +ld  s ++++++s  
   EPX72511.1 257 QMVFSG-----TDAVNSTHPSPDLSQLLICSDSKNVPILDFRSNQIINEISHY 304
                  555555.....456777777778778888888889999999999999998765 PP

  == domain 3  score: 11.7 bits;  conditional E-value: 2.7e-05
  ANAPC4_WD40  39 sevrsLaWkpdgklLavaysdgevrllda 67 
                   +v   aW+p+g++La + +d++ ++ d+
   EPX72511.1 305 DSVLTGAWHPNGQILATGGQDTTFKIWDS 333
                  5566669*******************997 PP

  == domain 4  score: 1.1 bits;  conditional E-value: 0.055
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldae 68 
                  + s ++++ ++  g+ La + +   v++++ +
   EPX72511.1 346 QMSAITNVIFSSTGESLAAVEQADFVQIYNTK 377
                  5678999*************999999999876 PP

  == domain 5  score: -2.2 bits;  conditional E-value: 0.6
  ANAPC4_WD40  40 evrsLaWkpdgklLavaysd 59 
                  e+++ +++p+g  ++v+ +d
   EPX72511.1 390 EISGASFSPSGDTFVVGLDD 409
                  68888999*******99887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (430 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       271  (0.0151152); expected 358.6 (0.02)
Passed bias filter:                      244  (0.0136092); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 2858.23
//
Query:       EPX72512.1  [L=593]
Description: vacuolar sorting protein Vps33 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.8e-92  309.8   0.6    6.5e-92  309.6   0.6    1.0  1  Sec1      Sec1 family


Domain annotation for each model (and alignments):
>> Sec1  Sec1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  309.6   0.6   3.6e-96   6.5e-92       1     574 [.      24     581 ..      24     582 .. 0.82

  Alignments for each domain:
  == domain 1  score: 309.6 bits;  conditional E-value: 3.6e-96
                 EEEEE-HHHHHHHHTT--HHHHHTTTEEETT..T--S-.....BTTSEEEEEE-S-HHHHHHHHHHHHSS....-SBS-EEEEESS---HHHHHHHHH. CS
        Sec1   1 KvLvlDkelskilssvlkvsdlleegVtkieklkkrepskrealphlkaiyflrptkenidrlakdfisa....rrykeyhifftprlseslleglaka 95 
                 K L+l++els+il+ +++++ l+e+g+ +++++  + ++ +e  +++  iy++rpt en +++++ ++++     ++ e +++ +p  +  l+e +++ 
  EPX72512.1  24 KSLLLERELSGILGQIITTNTLQEHGIPQVFWF--DRNIPQELDQKV--IYLCRPTYENAKLVSA-HVRQhqqdMNQTENTVILLPGTNV-LFETVLQ- 115
                 789********************99********..666556666677..***************6.444445567888889999998874.5555554. PP

                 .S.G.GGGEEEEE----SEEEETTEEE-STTHHHHSTTG.....GG.......--HHHHHHHHHHHHHHH.-..--EEEE-TT-HHHHHHHH....... CS
        Sec1  96 de.evvkkvklkelnldfvplesdlfslnpelplsfrdlyldndnsaleeeieslldriakgLlsvllsl.ekkiPiirykgsaasmvakkladelkek 192
                  e  v+ ++ + e+ l++vpl++dlfsl  el   ++             ++e+ll+  +++L++      ++++P+  ++g +++++ +  ++ ++e+
  EPX72512.1 116 -EeGVFGELVIMEWSLHVVPLDEDLFSL--EL---GPGV-----------KEENLLKHSVSALVN--FESyNGRFPRASGRGFNSAKLVEIWDKWYQEE 195
                 .32345555578****************..52...2222...........35688889*******..555356*********99995555554444443 PP

                 ....HHHHTTT....--SS--EEEEE-GGG-SSTTTS---BHHHHHHHHS--BTEEEEEE--SS.......SEEEEEE--TT...-TTHHHHTTSBHHH CS
        Sec1 193 ids.kknfese....ssrqrpvLiIlDRsvDlvtpllhqwTYqaliddllgglnnnnvvleeep.......keekeaelvess.sDeffaelrhlnfge 278
                   s ++    +     s++ + ++I+DRs+D+vtp+l+q+TY +l+d++lg +++ nv+l ++        ++   +++++ss +  + +++++ nf+ 
  EPX72512.1 196 --SiNNAR--KdvyeLSTSYDSVLIMDRSMDWVTPFLTQLTYFGLLDEILG-IEQMNVKLPPNLvsrnenlSSGSHKKFSLSSsYSTITKDVKDVNFNC 289
                 ..222233..246889999999****************************8.87888888777788889996666666777777*************** PP

                 HHHHHHHHHHHHHHHHHTTT...-TTHHHHHHHHHH-GGGHHHHHHHHHHHHHHHHHHHHS-HHH.HHHHHHHHHHHHSS--..B--..-HHHHHHHH- CS
        Sec1 279 vgeklkkeakeyqeenekkrngakesiadlkkfvaklpelqeekkklskHtnlaeellkevkkrkldellelEqdlatgesd.kkikekkvieeliadd 376
                 +g++l k a+++++++e +r +ak +++++++fv+kl++lq+e+++l +Ht lae +++++k+++++++l+++q+l++g  d +++    ++++li+ d
  EPX72512.1 290 IGSHLGKIARKLSSDYEGRR-QAK-TVNQIRDFVSKLGSLQSEHTSLNIHTGLAELMMQHTKSNNFRKILQIQQSLVSGV-DpSSQF--PLLDQLIYMD 383
                 ****************5555.667.****************************************************864.546665..67******** PP

                 TTS-H.HHHHHHHHHHHH...-B.-HT--GG....GGHHHHGGGGG........---.BGGG-------...............---------S..... CS
        Sec1 377 eptseledklRLlllyslvegglkekelkellrelvqsalygleylktlrsleklgllkkrkgkksskkkss........lklikeeedeesnyd.... 463
                 +p   +e++ R+l+l+s+v  glk+++++++++e+vq + yg++ + t++ l  +gll+ r +++ s ++s           li+ee++e+ + d    
  EPX72512.1 384 VP---VEEIFRILCLASIVSTGLKQRDIDYYRKEIVQ-T-YGYKNILTFQCLIDAGLLRVRPSSNISLQRSFsyttwlnnYPLIDEEVNEQHPLDisyt 477
                 **...89************99****************.8.******************888885555554449****9998889999999999887777 PP

                 ..TT-----HHHHHHHHHTTT-S-TTTS-BSS-GGGS--------------------------S-EEEEEEEEEE-HHHHHHHHHHT...TSSSEEEEE CS
        Sec1 464 lsgvsryaPllvrlvealikgkklssespslskkdpsqeesssslrsakktnsaskesaekkkkqrviVffvGGvTysEiralrllskqekknkeiiig 562
                 +sg   y Pl+v +  +++++  + ++ p l++ ++++ +  +  ++++++ s++  + +  kk++++Vff+GG+T++E++a rll++++ ++ e+++ 
  EPX72512.1 478 YSG---YGPLSVHMSYDILQNRDNPEKLPRLKSLPGEYVD--KWFKQQDRSFSRTFTRGTD-KKRKILVFFLGGCTFTELSAFRLLAEKH-GKFEFTFM 569
                 888...**************88888888888777777765..4444444444444444444.4577*********************976.5677**** PP

                 EEEE--HHHHHH CS
        Sec1 563 ttsilnpksfle 574
                 tt+++++ + ++
  EPX72512.1 570 TTGMITGGKVVQ 581
                 *******98876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (593 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       491  (0.0273858); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.29s 00:00:00.88 Elapsed: 00:00:00.47
# Mc/sec: 3825.64
//
Query:       EPX72513.1  [L=811]
Description: DNA topoisomerase I [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   1.1e-100  335.5   3.7   1.1e-100  335.5   3.7    2.3  2  Topoisom_I_N  Eukaryotic DNA topoisomerase I, DNA binding fra
    2.4e-98  328.0   2.2    2.4e-98  328.0   2.2    1.8  2  Topoisom_I    Eukaryotic DNA topoisomerase I, catalytic core
    7.9e-29   99.4   1.6      3e-28   97.6   1.6    2.1  1  Topo_C_assoc  C-terminal topoisomerase domain


Domain annotation for each model (and alignments):
>> Topoisom_I_N  Eukaryotic DNA topoisomerase I, DNA binding fragment
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -6.7   4.4         3   1.8e+04     101     119 ..      79      97 ..      69     104 .. 0.46
   2 !  335.5   3.7  1.9e-104  1.1e-100       2     213 .]     191     405 ..     190     405 .. 0.98

  Alignments for each domain:
  == domain 1  score: -6.7 bits;  conditional E-value: 3
                   TT-----HHHHHHHHHHHH CS
  Topoisom_I_N 101 kaltkeekkklkeekekle 119
                    + ++e+kk ++++ ++++
    EPX72513.1  79 TKNNNETKKVTRKKDQEVK 97 
                   2333333333333333333 PP

  == domain 2  score: 335.5 bits;  conditional E-value: 1.9e-104
                   --S-EE----B---------TT--EEETTEEE---HHHHHHHHHHHHTTTSSGGG-HHHHHHHHHHHHHHH...HHTT----GGGEE-HHHHHHHHH CS
  Topoisom_I_N   2 kWktLehnGvlfppeYeplpknvklkydgkpvkLspeaEEvatfyaamletdyakkevFqknffkdfkkvl...kekekikelekcdFskikeylek 95 
                   kW+tLeh+Gvlf+p+Yeplpk+vkl+ydgkpv+L+ eaEEva+f++amletd+ak+++Fqknff+df +v+   + k++ike++kcdFs++++y+e+
    EPX72513.1 191 KWSTLEHSGVLFAPPYEPLPKDVKLYYDGKPVDLPLEAEEVAGFFGAMLETDHAKNPTFQKNFFRDFLAVCkecNFKHNIKEFSKCDFSQMFHYFER 287
                   9********************************************************************9944444667****************** PP

                   HHHHHTT-----HHHHHHHHHHHHHHHHEEEETTEEEEEE--B----EE----TT-TTTT-EE----GGG-EEE--SSS-----STT---SEEE--T CS
  Topoisom_I_N  96 ekekkkaltkeekkklkeekekleekygyalldgrkekvgnfrvepPgLfrgrGehpktGklkkrvlpedvtiNigkdakvPeppaghkWkevvhdn 192
                   ++e+k+++ ke+kk++k++k+++ee+y++++ldgrke+vgnfr+epPgLfrgrG+hpktG lk+rv+pe++tiNigk+a+vP+p +gh+W+ev+hdn
    EPX72513.1 288 KREEKRNMPKEQKKEAKKKKDEEEESYKWCILDGRKERVGNFRIEPPGLFRGRGNHPKTGSLKRRVFPEQITINIGKEAPVPKPLPGHHWAEVRHDN 384
                   ************************************************************************************************* PP

                   T---SEEEE-TTT--EEEEEE CS
  Topoisom_I_N 193 tvtwlaswkeningqvkyvmL 213
                   tvtwla+w+en+n++vkyv+L
    EPX72513.1 385 TVTWLATWHENVNNNVKYVFL 405
                   *******************98 PP

>> Topoisom_I  Eukaryotic DNA topoisomerase I, catalytic core
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.6      0.95   5.7e+03     220     225 ..     287     292 ..     243     311 .. 0.50
   2 !  328.0   2.2    4e-102   2.4e-98       2     229 ..     409     632 ..     408     635 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 0.95
                 XXXXXX CS
  Topoisom_I 220 alkedi 225
                 +++e++
  EPX72513.1 287 RKREEK 292
                 222222 PP

  == domain 2  score: 328.0 bits;  conditional E-value: 4e-102
                 SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-S-HHHHHHHHHHHHHHHH---------TTS-----GGG-BGGGEEE-TT.SEEEEEEE-GGG-E CS
  Topoisom_I   2 sklkgekdfkKYekarkLkkvvekiredykkklkskeilekqlatavylidklaLrvGnekeeeeadtvGccsLrvehvklsekektitldFlGKdsir 100
                 s+lkg++d kKYek rkLk+++++ir+ y+k+lks+ ++e+q++ta+ylid +aLr+Gnek e+eadtvGccsLr+ehv+l+++ + + +dFlGKdsir
  EPX72513.1 409 SSLKGQSDLKKYEKSRKLKDYIDDIRKGYTKDLKSDLTVERQRGTAMYLIDVFALRAGNEKGEDEADTVGCCSLRYEHVSLKPP-NIVIFDFLGKDSIR 506
                 899********************************************************************************9.************** PP

                 EEEEEE--HHHHHHHHHHHTT.--TTSBTTTT--HHHHHHHHTTTSTT--TTHHHHHHHHHHHHHHHHH..--------TTHHHHHHHHHHHHHHHHHT CS
  Topoisom_I 101 yfntvkvdkqvyknlkifckk.kkkgeevFdkintsklNkyLkelmegLsAKvFRTYnASitlqeqLkklekievdesnvaekikayneAnreVAilcn 198
                 y+n+v+vd+qv+knl+if+++ kk+g+ +Fd+++t++lNkyL++lm+gLsAKvFRTYnAS t++e+Lkk+    +++ + a+k+ +yn+Anr+VAilcn
  EPX72513.1 507 YYNEVEVDPQVFKNLRIFKRSpKKEGDLIFDRLTTNTLNKYLTSLMDGLSAKVFRTYNASHTMNEELKKM----PKNLSLADKVLFYNRANRTVAILCN 601
                 *********************9***********************************************8....8999********************* PP

                 -EE-XXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Topoisom_I 199 hqrsvpkqheksmeklkkkiealkedikelk 229
                 hqrsv+k+h+ +me+++++i+al+++  +l+
  EPX72513.1 602 HQRSVTKNHDVQMERYEERIKALQYQRLRLH 632
                 ************************9987766 PP

>> Topo_C_assoc  C-terminal topoisomerase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.6   1.6     5e-32     3e-28       2      69 ..     743     810 ..     742     811 .] 0.98

  Alignments for each domain:
  == domain 1  score: 97.6 bits;  conditional E-value: 5e-32
  Topo_C_assoc   2 ekikklklqlkdkeenkevaLgtSkinYlDPRitvawckkhdvpiekiFsktlleKfaWAmevdedfk 69 
                   ++ik +++q+ dk+enk+ aL+tSkinY+DPR+t +++++ +vpiek+Fskt+++Kf+WA e+ +d++
    EPX72513.1 743 DRIKVMRTQMIDKDENKTTALTTSKINYIDPRLTFSFSRREEVPIEKLFSKTIRDKFNWASETPSDWE 810
                   79*****************************************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (811 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2120  (0.118244); expected 358.6 (0.02)
Passed bias filter:                      587  (0.0327403); expected 358.6 (0.02)
Passed Vit filter:                        72  (0.00401584); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.86u 0.31s 00:00:01.17 Elapsed: 00:00:00.48
# Mc/sec: 5115.51
//
Query:       EPX72514.1  [L=311]
Description: inorganic phosphate transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.1e-44  148.4   5.5    1.9e-16   59.8   0.1    3.1  3  Mito_carr  Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.9   0.1   1.3e-17   2.3e-13      10      95 ..      28     108 ..      21     110 .. 0.94
   2 !   59.8   0.1     1e-20   1.9e-16       6      95 ..     121     206 ..     116     208 .. 0.93
   3 !   40.6   0.2     1e-14   1.8e-10       7      90 ..     223     301 ..     217     305 .. 0.94

  Alignments for each domain:
  == domain 1  score: 49.9 bits;  conditional E-value: 1.3e-17
                 HHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr  10 laGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                 l G+la+ ++++++tPldvvK+r q++++ + +      +  l++++ +eG+rgl+ G +p++l+++ +   k ++ye++k+ + k
  EPX72514.1  28 LGGLLACGITHTAITPLDVVKCRRQVNPNVYPS-----NVAGLRSLFGKEGMRGLFTGGVPTFLGYSLQGLGKYGFYEVFKTQYSK 108
                 789***************************999.....5779***************************************98765 PP

  == domain 2  score: 59.8 bits;  conditional E-value: 1e-20
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   6 lkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                   +l+a++ a ++a ++ +P++ +K+r+qt   + +++    ++++ +k++ +eG+  lyrGl+p ++r++p++++kf+++e++ + l++
  EPX72514.1 121 GVYLAASASAELLADVMLCPMEALKVRVQTTTPRFANT----TREAWSKVVSSEGFGTLYRGLTPLWFRQIPYTMMKFASFEKIVESLYN 206
                 56799*****************************9885....89****************************************998876 PP

  == domain 3  score: 40.6 bits;  conditional E-value: 1e-14
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   7 kellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlk 90 
                  +++ G +ag++ +++ +P d++  +l ++k+ ++      +  + ++iyk+ G+ gl+ Gl+++++++   +++++++y+++k
  EPX72514.1 223 ISFAGGYMAGVLCAIISHPADTMVSKLNSSKQPGEG-----VGAAASRIYKNIGFGGLWNGLGMRIVMIGTLTGAQWLIYDSFK 301
                 67999****************************999.....8899*************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (311 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       399  (0.0222544); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2282.60
//
Query:       EPX72515.1  [L=255]
Description: hypothetical protein SOCG_00278 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       895  (0.0499191); expected 358.6 (0.02)
Passed bias filter:                      463  (0.0258241); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.28s 00:00:00.78 Elapsed: 00:00:00.46
# Mc/sec: 1672.80
//
Query:       EPX72516.1  [L=677]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.6e-61  202.5   0.1    1.8e-20   72.5   0.1    4.5  4  RRM_1        RNA recognition motif. (a.k.a. RRM, RBD, or RNP 
    3.3e-05   23.8   0.2       0.46   10.5   0.0    3.9  4  Nup35_RRM_2  Nup53/35/40-type RNA recognition motif
    5.9e-05   22.7   0.0       0.22   11.1   0.0    2.5  2  RRM_5        RNA recognition motif. (a.k.a. RRM, RBD, or RNP 
  ------ inclusion threshold ------
       0.07   12.6   0.0         13    5.4   0.0    3.3  3  DUF3343      Protein of unknown function (DUF3343)
       0.26   11.4   3.6       0.76    9.9   3.6    1.7  1  Podoplanin   Podoplanin
        5.9    6.0   6.1        4.9    6.3   0.2    2.4  2  Zip          ZIP Zinc transporter


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.5   0.1   6.1e-24   1.8e-20       1      69 [.       7      76 ..       7      77 .. 0.98
   2 !   53.3   0.0     6e-18   1.8e-14       1      69 [.     116     185 ..     116     186 .. 0.95
   3 !   50.9   0.0   3.4e-17     1e-13       1      57 [.     281     338 ..     281     345 .. 0.97
   4 !   20.4   0.0   1.1e-07   0.00034      33      69 ..     533     571 ..     519     572 .. 0.83

  Alignments for each domain:
  == domain 1  score: 72.5 bits;  conditional E-value: 6.1e-24
                EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1  1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrel 69
                lfV+nL++ +++++L+ +Fs++Gpik+  +v++ etg ++g++fV+F   edA++A+++l ++kl+gr l
  EPX72516.1  7 LFVRNLAFGTKKDDLSNFFSDIGPIKHTVVVTNpETGENRGYGFVTFSMVEDAQRAIQELKNRKLNGRIL 76
                8******************************************************************987 PP

  == domain 2  score: 53.3 bits;  conditional E-value: 6e-18
                 EEEESETTTSSH.HHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvte.eeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 l+++nLp+++++ + L+ +F kfG+i++i++++++ g+  gfafV ++++e+A+kA+ea+ng++l+gr++
  EPX72516.1 116 LIIRNLPWSIKKpNHLEPYFAKFGKIREIRVPTKAGGRMCGFAFVWMQDREAAQKAMEAVNGTELDGRPV 185
                 689******975389****************************************************986 PP

  == domain 3  score: 50.9 bits;  conditional E-value: 3.4e-17
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHH CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAle 57 
                 +fV+n+ +++te++L+++F++fGp   +k+vrd  t+k+ g afV+F  + d +++le
  EPX72516.1 281 IFVRNILFECTEQQLYQHFRQFGPLAYAKIVRDpVTDKPLGRAFVKFRYEKDCNDCLE 338
                 8******************************************************998 PP

  == domain 4  score: 20.4 bits;  conditional E-value: 1.1e-07
                 E..TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1  33 d..etgkskgfafVeFeskedAekAlealngkklggrel 69 
                 +    g+skg++f +F s+  A  Al+ lng+++  r++
  EPX72516.1 533 EksGAGRSKGYGFLQFVSHKYALMALRWLNGREVTVRKI 571
                 345789**************************9987776 PP

>> Nup35_RRM_2  Nup53/35/40-type RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.011        34      18      52 ..      22      62 ..      13      63 .. 0.81
   2 !   10.5   0.0   0.00015      0.46      11      52 ..     122     171 ..     121     172 .. 0.81
   3 ?    4.0   0.1     0.017        50      15      50 ..     293     334 ..     280     337 .. 0.69
   4 ?   -3.0   0.0       2.6   7.9e+03      38      53 .]     543     558 ..     536     558 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.011
  Nup35_RRM_2 18 lehFasfGeIvkhyvp......kevsvmyvkfesekdaekA 52
                   +F ++G+I +  v        ++ + +v+f    da++A
   EPX72516.1 22 SNFFSDIGPIKHTVVVtnpetgENRGYGFVTFSMVEDAQRA 62
                 46********9965556888888899999999999999998 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00015
  Nup35_RRM_2  11 telielVle...hFasfGeIvkhyvp.......kevsvmyvkfesekdaekA 52 
                  +++i+++ +   +Fa fG+I ++ vp        +  +++++  ++ +a+kA
   EPX72516.1 122 PWSIKKPNHlepYFAKFGKIREIRVPtkaggrmCGFAFVWMQ--DREAAQKA 171
                  677777777778**************9999877556777777..99999988 PP

  == domain 3  score: 4.0 bits;  conditional E-value: 0.017
  Nup35_RRM_2  15 elVlehFasfGeIvk.hyvp.....kevsvmyvkfesekdae 50 
                  +  ++hF++fG+    + v+     k    ++vkf+ ekd++
   EPX72516.1 293 QQLYQHFRQFGPLAYaKIVRdpvtdKPLGRAFVKFRYEKDCN 334
                  56789******9766344446665633445788888888886 PP

  == domain 4  score: -3.0 bits;  conditional E-value: 2.6
  Nup35_RRM_2  38 vmyvkfesekdaekAL 53 
                  + +++f s k a +AL
   EPX72516.1 543 YGFLQFVSHKYALMAL 558
                  67999*9*99999998 PP

>> RRM_5  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   0.0   0.00032      0.96      25     103 ..       3      85 ..       1     104 [. 0.74
   2 !   11.1   0.0   7.4e-05      0.22      65     114 ..     156     205 ..     106     216 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00032
       RRM_5  25 egsVllVyglepdkvnldklFnlfclYgnvervkflkt.....kketalvqmgdasaveravqHLnnaklfgkrlevalSKqqa 103
                 ++s l+V +l   +   d l n+f+  g +++  ++ +      +++ +v  +   +++ra+q L+n kl g+ l++    +++
  EPX72516.1   3 TSSTLFVRNLAFGT-KKDDLSNFFSDIGPIKHTVVVTNpetgeNRGYGFVTFSMVEDAQRAIQELKNRKLNGRILRIDYAAHRK 85 
                 66777777777664.5677888888888888877776622222458899999*********************99998776654 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 7.4e-05
       RRM_5  65 etalvqmgdasaveravqHLnnaklfgkrlev..alSKqqavsekepfeled 114
                 + a+v m d  a+++a++ +n+++l g+++ v  alSK     e+++   ed
  EPX72516.1 156 GFAFVWMQDREAAQKAMEAVNGTELDGRPVAVdwALSKDAY--ESNVTSQED 205
                 6799************************6655227788765..444444444 PP

>> DUF3343  Protein of unknown function (DUF3343)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0    0.0042        13       1      29 [.      48      76 ..      48      78 .. 0.93
   2 ?    1.4   0.0     0.075   2.3e+02      26      58 ..     141     173 ..     139     182 .. 0.80
   3 ?    1.2   0.0     0.084   2.5e+02       1      28 [.     543     570 ..     543     572 .. 0.87

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0042
     DUF3343  1 yyvitFssthhAiaaekalkeggiearli 29
                y+ +tFs + +A++a + lk +++++r+ 
  EPX72516.1 48 YGFVTFSMVEDAQRAIQELKNRKLNGRIL 76
                789***********************997 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.075
     DUF3343  26 arliplPreis.agCGlalrvneedieeasrlls 58 
                 +r i++P +   + CG a+    +d+e+a++ ++
  EPX72516.1 141 IREIRVPTKAGgRMCGFAFVW-MQDREAAQKAME 173
                 78899*****99*****9988.567777776665 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.084
     DUF3343   1 yyvitFssthhAiaaekalkeggiearl 28 
                 y+ + F s+ +A+ a + l+ +++++r 
  EPX72516.1 543 YGFLQFVSHKYALMALRWLNGREVTVRK 570
                 677889*************999998885 PP

>> Podoplanin  Podoplanin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   3.6   0.00026      0.76      73     129 ..     198     257 ..     175     259 .. 0.91

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00026
                 XX-----GGG-XXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXX CS
  Podoplanin  73 esvtdlrledlptaestvkakeesqstttlnvvtshst...ekvgeetettvekdGLatv 129
                  +vt+++ +d+p++e+   ++ee+++ + +n ++ hs    e+ +ee  +t ek+ L t 
  EPX72516.1 198 SNVTSQEDNDEPAQENDESDQEEMEKDADTNSAAQHSSivpENSDEEDLQTGEKEELDTS 257
                 5799********************************9999999999999999**999885 PP

>> Zip  ZIP Zinc transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.2    0.0016       4.9     106     169 ..     203     266 ..     132     339 .. 0.66
   2 ?    1.6   1.7     0.043   1.3e+02     122     170 ..     611     659 ..     568     677 .] 0.58

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0016
         Zip 106 hkektpkkasssssesaakksvsndkveeseekedhvaeadtdadskeelrngkqeksesekeq 169
                 ++++ ++ +++++s ++  ++  + ++  ++ +   + ++++d +++e++  + ++++e+++e+
  EPX72516.1 203 QEDNDEPAQENDESDQEEMEKDADTNSAAQHSSIVPENSDEEDLQTGEKEELDTSSTEEENSES 266
                 2333333333333333333333333333333333333333333333333333333333333333 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.043
         Zip 122 aakksvsndkveeseekedhvaeadtdadskeelrngkqeksesekeqa 170
                 +++k+ ++++++  e+ ++  ++++++a++++ +r+++++ +++++++a
  EPX72516.1 611 KVVKRRQEKEITFREKAKQMREKKEEEAQQQKRKRKDSSGDDSEKEKKA 659
                 4444444444444444444433333333333333333333333333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (677 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2590  (0.144459); expected 358.6 (0.02)
Passed bias filter:                      755  (0.0421105); expected 358.6 (0.02)
Passed Vit filter:                       144  (0.00803168); expected 17.9 (0.001)
Passed Fwd filter:                        40  (0.00223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.94u 0.32s 00:00:01.26 Elapsed: 00:00:00.50
# Mc/sec: 4087.21
//
Query:       EPX72517.1  [L=254]
Description: DNA repair endonuclease Swi10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.6e-47  160.2   0.1    2.6e-47  159.6   0.1    1.3  1  Rad10      Binding domain of DNA repair protein Ercc1 (rad10/
      3e-06   26.8   0.2      7e-05   22.5   0.0    2.6  3  HHH        Helix-hairpin-helix motif
    7.3e-05   23.3   0.0    0.00016   22.2   0.0    1.6  1  HHH_5      Helix-hairpin-helix domain
  ------ inclusion threshold ------
        0.1   12.6   0.0       0.25   11.3   0.0    1.6  1  FANCI_HD1  FANCI helical domain 1
       0.13   12.4   0.0       0.34   11.0   0.0    1.8  1  HHH_2      Helix-hairpin-helix motif


Domain annotation for each model (and alignments):
>> Rad10  Binding domain of DNA repair protein Ercc1 (rad10/Swi10)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.6   0.1   7.1e-51   2.6e-47       2     114 .]      46     158 ..      45     158 .. 0.99

  Alignments for each domain:
  == domain 1  score: 159.6 bits;  conditional E-value: 7.1e-51
       Rad10   2 ilvserqkgnplLkslknvpweykdivpDyvigsttcvlflslkyhklhpeYieerlkklkkkyklrvlLvlvDvedseevlkeLnkicilndltllla 100
                 ilv+ rqkgnplL +++nvpwey++ivpD+v+g+ +c lflslkyh+lhpeYi+ r+++l+k y+lrv+LvlvDve+++++++eL k++i+n++tl+la
  EPX72517.1  46 ILVNYRQKGNPLLPNVRNVPWEYAEIVPDFVMGNGICSLFLSLKYHHLHPEYIYGRISRLGKAYNLRVMLVLVDVENHQASIQELVKTSIVNQYTLVLA 144
                 99************************************************************************************************* PP

       Rad10 101 wsaeeaaryletlk 114
                 ws eeaarylet+k
  EPX72517.1 145 WSSEEAARYLETYK 158
                 ************98 PP

>> HHH  Helix-hairpin-helix motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0     0.089   3.2e+02      19      28 ..      38      47 ..      38      48 .. 0.91
   2 ?   -2.9   0.0       2.2     8e+03       8      15 ..     125     132 ..     124     132 .. 0.84
   3 !   22.5   0.0   1.9e-08     7e-05       1      29 [.     204     232 ..     204     233 .. 0.91

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.089
                -SHHHHHHHH CS
         HHH 19 VGpktAeaIl 28
                V + tA aIl
  EPX72517.1 38 VSRVTAHAIL 47
                789******8 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2.2
                 SSHHHHHT CS
         HHH   8 asreeLla 15 
                 as+ eL++
  EPX72517.1 125 ASIQELVK 132
                 9999*986 PP

  == domain 3  score: 22.5 bits;  conditional E-value: 1.9e-08
                 SHHHHHTSSHHHHHTSTT-SHHHHHHHHH CS
         HHH   1 sleglipasreeLlalPGVGpktAeaIls 29 
                 sl+g   asreeL++l+G+Gp + +++l+
  EPX72517.1 204 SLKGALSASREELEQLEGWGPTKVNRFLE 232
                 6788889******************9997 PP

>> HHH_5  Helix-hairpin-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.0   4.5e-08   0.00016       4      53 ..     184     232 ..     183     236 .. 0.94

  Alignments for each domain:
  == domain 1  score: 22.2 bits;  conditional E-value: 4.5e-08
                 HHTSTT--HHHHHHHHTTT--SHHHHHHS-HHHHHTSTTS-HHHHHHHHH CS
       HHH_5   4 LlsvsGiGpktAlallsaGiesvedlaaadveeLakipGiGkktAeriil 53 
                 L+sv Gi++++ l+lls+ ++s+   ++a++eeL ++ G G+ ++ r ++
  EPX72517.1 184 LTSVRGINKSDSLTLLSQ-FGSLKGALSASREELEQLEGWGPTKVNRFLE 232
                 89****************.***********************99998666 PP

>> FANCI_HD1  FANCI helical domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   6.8e-05      0.25      23      54 ..     108     139 ..     100     141 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 6.8e-05
   FANCI_HD1  23 pFtvallLsvarirrfeeqvfdlLkaaivksf 54 
                  +++ ++L++  ++ ++ ++++l+k++iv+++
  EPX72517.1 108 AYNLRVMLVLVDVENHQASIQELVKTSIVNQY 139
                 68999************************987 PP

>> HHH_2  Helix-hairpin-helix motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   9.5e-05      0.34      13      49 ..     192     228 ..     182     243 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 9.5e-05
       HHH_2  13 ektAklLakrFksldaLkkasleeLlevddiGeeiAq 49 
                 ++ + +L ++F+sl    +as eeL ++++ G++  +
  EPX72517.1 192 KSDSLTLLSQFGSLKGALSASREELEQLEGWGPTKVN 228
                 55667899**********************9997544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       539  (0.030063); expected 358.6 (0.02)
Passed bias filter:                      468  (0.026103); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 1723.09
//
Query:       EPX72518.1  [L=466]
Description: ER oxidoreductin Ero1a [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.6e-108  361.9   7.5   4.7e-108  361.6   7.5    1.0  1  ERO1      Endoplasmic Reticulum Oxidoreductin 1 (ERO1)


Domain annotation for each model (and alignments):
>> ERO1  Endoplasmic Reticulum Oxidoreductin 1 (ERO1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  361.6   7.5  2.6e-112  4.7e-108      11     352 ..      52     408 ..      41     409 .. 0.88

  Alignments for each domain:
  == domain 1  score: 361.6 bits;  conditional E-value: 2.6e-112
        ERO1  11 ktdfFryfkvnld.keCpfweddeglCanraCaveeceeeeiPekwraeelsklertlseeeesavkeakeeeeaeeedyceledeeeee.avyvdLle 107
                 ++d+F+ +k+nl+  eCp+w++d+++C+++ Cav++  e+e+P+ w+  +ls++e++++++e+++      +e+ ++ dyc+l++ ++ + +vyv+L+ 
  EPX72518.1  52 QSDYFSNYKLNLYrAECPLWDNDNAMCSSQGCAVDTLGENEVPNIWK--QLSEFEQPSKKNEKECN-----WEHDSKLDYCYLDEVSSGQeCVYVSLVG 143
                 59***********99*******************************9..679****9995555553.....33344569*****9999888******** PP

        ERO1 108 nperfTgYkGesaervWkaiYeencf...keeseseese.........................ekeleelclekrvfyrliSGlhasisihlaaeyln 178
                 nperfTgY+G++++ +W++iYe+ncf   +   +++++e                         + + + +c+ekr+++++iSG+hasis h++++y++
  EPX72518.1 144 NPERFTGYSGDHTATIWRTIYEQNCFvidD---DESSQEkskrdsfykpgmypfqltpkeddiiSVSPSIACQEKRMLNKIISGFHASISSHICENYYD 239
                 **************************6541...3333334568899*****************999999****************************** PP

        ERO1 179 qetgewepnlelfkervgkhperlenlYfnyalvlrAvaklapyleelefst.....geeeedeetkellkeelakellsalsskekafdesklfkdke 272
                  e+++w++nle++ ++vg++per+en++fnyal+ +A +k+a+ le++e+++     ++ + d++tk ++     ++l+ + ++++k+  +sklf+ +e
  EPX72518.1 240 AERNRWTRNLECWLAKVGNYPERIENIFFNYALLHQAFVKIADQLEDMEYNNntfcpDNLAIDARTKLAF-----DNLAFQSQQDRKVIMSSKLFS-DE 332
                 ***********************************************99887112224444455454443.....44444455667999*******.79 PP

        ERO1 273 eaeelkeefrerfrnisrimdCVgCekCrLwGKlqttGlgtAlkilfeeeekeeekklkLernevvALintlerlseSie 352
                 e++++ke fr++f++isrimdCVgC+kCrLwGKlq+tG+gtAlk+l+e+e++     ++L+ +e+vAL+nt++r+++S++
  EPX72518.1 333 ESQRFKETFRRHFHDISRIMDCVGCDKCRLWGKLQMTGYGTALKLLLESETH----LSDLRPSEIVALVNTFDRIAHSVQ 408
                 *************************************************875....689*******************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (466 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       608  (0.0339115); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 3337.44
//
Query:       EPX72519.1  [L=799]
Description: hsp78-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.4e-51  173.4   0.9    2.7e-48  164.3   0.0    3.1  3  AAA_2            AAA domain (Cdc48 subfamily)
    2.7e-34  117.2   1.2    2.7e-34  117.2   1.2    2.5  2  AAA_lid_9        AAA lid domain
    8.1e-26   89.9   0.2    3.3e-25   87.9   0.2    2.1  1  ClpB_D2-small    C-terminal, D2-small domain, of ClpB protein
    9.2e-19   68.2   0.1    1.4e-08   35.3   0.0    2.7  2  AAA              ATPase family associated with various cellul
    7.4e-14   51.9   0.1    7.3e-10   39.0   0.0    3.1  2  AAA_5            AAA domain (dynein-related subfamily)
    2.4e-11   44.3   7.8    0.00024   21.5   0.1    4.4  4  AAA_16           AAA ATPase domain
    4.5e-08   33.0   0.1    2.4e-06   27.3   0.0    2.5  2  Sigma54_activat  Sigma-54 interaction domain
      6e-07   29.8   3.6      0.011   16.0   0.0    4.4  3  AAA_22           AAA domain
    7.6e-07   29.0   0.2      0.069   12.9   0.0    3.1  3  IstB_IS21        IstB-like ATP binding protein
    4.3e-06   26.8   0.0      0.039   13.9   0.0    3.1  2  NACHT            NACHT domain
    5.2e-06   26.1   0.0      0.053   13.0   0.0    2.6  2  AAA_7            P-loop containing dynein motor region
    7.9e-06   26.0   7.3      0.079   12.9   0.0    4.4  3  ATPase_2         ATPase domain predominantly from Archaea
    1.2e-05   24.9   0.7       0.17   11.3   0.0    3.7  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
    1.2e-05   25.3   0.1       0.14   12.2   0.0    2.9  2  AAA_14           AAA domain
    6.2e-05   23.3   0.0        1.4    9.4   0.0    3.5  3  RNA_helicase     RNA helicase
    0.00016   22.2   0.4       0.37   11.4   0.1    3.3  2  AAA_18           AAA domain
    0.00025   21.1   0.0       0.77    9.7   0.0    3.0  2  ResIII           Type III restriction enzyme, res subunit
    0.00027   21.2   1.1        3.7    7.8   0.0    4.0  3  AAA_28           AAA domain
    0.00033   20.6   0.0        1.1    9.1   0.0    2.8  2  RsgA_GTPase      RsgA GTPase
    0.00042   20.3   0.7        1.1    9.2   0.0    2.7  2  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
     0.0011   19.5   3.0       0.26   11.8   0.0    3.5  3  ABC_tran         ABC transporter
     0.0013   18.5   0.3       0.23   11.2   0.0    2.9  2  AAA_30           AAA domain
     0.0013   18.3   0.4      0.077   12.6   0.0    2.7  2  AAA_25           AAA domain
     0.0018   18.1   0.0      0.036   13.8   0.0    2.8  2  DNA_pol3_delta2  DNA polymerase III, delta subunit
     0.0019   18.4   0.0          1    9.6   0.0    2.6  2  Roc              Ras of Complex, Roc, domain of DAPkinase
     0.0024   17.6   0.0        2.5    7.9   0.0    2.6  2  AAA_29           P-loop containing region of AAA domain
     0.0035   17.1   4.8     0.0041   16.9   2.8    1.9  2  HAUS2            HAUS augmin-like complex subunit 2
     0.0037   17.0   3.6        0.5   10.1   0.0    3.8  3  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
     0.0068   16.2   1.3        6.4    6.5   0.0    3.5  4  AAA_21           AAA domain, putative AbiEii toxin, Type IV T
     0.0084   15.9   0.0        2.1    8.0   0.0    2.5  2  AAA_24           AAA domain
  ------ inclusion threshold ------
      0.011   15.4   0.1        2.8    7.5   0.0    2.5  2  SRP54            SRP54-type protein, GTPase domain
      0.017   14.9   0.0        2.7    7.7   0.0    2.6  2  ATP_bind_1       Conserved hypothetical ATP binding protein
      0.019   14.9   0.3        6.9    6.5   0.4    2.6  2  AAA_31           AAA domain
       0.03   13.4   0.1       0.14   11.2   0.0    2.2  2  T2SSE            Type II/IV secretion system protein
      0.033   14.4   2.4         14    5.9   0.1    4.0  3  AAA_33           AAA domain
      0.044   14.3  22.0        0.6   10.6   0.1    4.0  2  AAA_23           AAA domain
       0.05   12.8   0.0        1.8    7.7   0.0    2.7  2  NB-ARC           NB-ARC domain
      0.057   12.7   0.1       0.94    8.7   0.0    2.7  3  Zeta_toxin       Zeta toxin
      0.086   11.3   0.0       0.13   10.7   0.0    1.1  1  Orbi_NS1         Orbivirus non-structural protein NS1, or hyd
        0.1   12.0   0.0         17    4.8   0.0    2.5  2  PhoH             PhoH-like protein
        0.1   12.7   7.5        3.5    7.7   0.0    3.5  3  DUF87            Helicase HerA, central domain
        0.1   12.9   0.0        9.6    6.5   0.1    3.0  2  AAA_19           AAA domain
       0.11   12.3   0.0       0.96    9.2   0.0    2.3  2  PduV-EutP        Ethanolamine utilisation - propanediol utili
        0.3   10.9   4.0       0.71    9.7   4.0    1.7  1  DUF5315          Disordered region of unknown function (DUF53
       0.46   10.5   9.0        1.1    9.3   9.0    1.6  1  DUF1640          Protein of unknown function (DUF1640)
        8.7    6.3  10.0          4    7.4   0.1    4.3  4  Prefoldin        Prefoldin subunit


Domain annotation for each model (and alignments):
>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.0     0.037        15       6      76 ..     136     213 ..     131     215 .. 0.68
   2 ?   -0.3   0.3       2.7     1e+03     141     169 ..     415     448 ..     361     450 .. 0.78
   3 !  164.3   0.0   6.8e-51   2.7e-48       1     170 [.     531     694 ..     531     695 .. 0.97

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.037
                 EEEE--TTSSHHHHHHHHHHHTT-..........-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTS.EEEEET CS
       AAA_2   6 illlgptgvGktelakalaellfv......kkekkliradaselleeeevehlvsrligappgyvgaeegG.ivllDE 76 
                   l+gp gvGkt + + la  +         kek++i++d  +l+ + + +   ++ + +   + +a+eg  i+++DE
  EPX72519.1 136 PALVGPAGVGKTAIMEGLATRIVRgevpesMKEKTVIVLDLGALISGAKFRGDFEERLKSVLSDLEAAEGKvILFVDE 213
                 5689*********9999988774478899889999*****99999955544444444444444444444432445555 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 2.7
                 S.....TTTTSGGG--HHHHHHTT--HHHHTT-- CS
       AAA_2 141 k.....eeeeekkkeeveeelkkglipEllgRlp 169
                 k     e+++++ + +  +el++ +ipEl+  lp
  EPX72519.1 415 KarielERTQREGDYTRASELQYAIIPELQRKLP 448
                 144556777888888889999999****998877 PP

  == domain 3  score: 164.3 bits;  conditional E-value: 6.8e-51
                 -----EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTS............EEEEETGGG-------- CS
       AAA_2   1 rpiisilllgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG............ivllDEidKihpkessg 87 
                 rp++s+l+lgptgvGkt l+kalae+lf ++ek++ir+d+se++e    +h+vsrl+g+ppgy+g+ee+G            ++l+DE++K+h+     
  EPX72519.1 531 RPLASFLFLGPTGVGKTALTKALAEFLF-DSEKAMIRFDMSEFQE----KHTVSRLVGSPPGYIGYEESGelteavrrkpyaVLLFDELEKAHN----- 619
                 6899************************.****************....*********************************************..... PP

                 -----HHHHHHHHHHHH--EE-------EE-TT-EEEEEE--TTHHHHTTTS-STTTTSGGG--HHHHHHTT--HHHHTT--E CS
       AAA_2  88 advSregVqrdLLqileggtltdkqgrkvdtknilfImtgafgsskisdesrskeeeeekkkeeveeelkkglipEllgRlpe 170
                       +V ++LLq+l++g ltd+qgrkvd++ +l++mt+++gs+   ++    ++ + + +++v e ++ +  pE+l+R++e
  EPX72519.1 620 ------DVTNILLQVLDEGFLTDAQGRKVDFRSTLIVMTSNLGSEILVNDPS--TTVTPESRKKVIEMVQGYYPPEFLNRIDE 694
                 ......****************************************999555..58888999999****************97 PP

>> AAA_lid_9  AAA lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.2   1.2   6.8e-37   2.7e-34       2     102 ..     277     377 ..     276     386 .. 0.94
   2 ?   -0.2   0.4       2.5   9.6e+02      67     100 ..     402     435 ..     389     438 .. 0.64

  Alignments for each domain:
  == domain 1  score: 117.2 bits;  conditional E-value: 6.8e-37
   AAA_lid_9   2 eeetieiLrglkekyekhHgvkisdealeaavklSkrYisdrflPdkAIDllDeaaarvrlkkeskpeeleklekelaklekekealekeeekekaerl 100
                  +++i+iLrglke+ye hHgv+i+d+ l++a++ S+rYi+drflPdkAIDl+Dea++++rl++eskp+el++l++++ +++ e e+l+ke+++++ er 
  EPX72519.1 277 LSDSISILRGLKERYEVHHGVRITDDSLVTAATYSSRYITDRFLPDKAIDLVDEACSSLRLQQESKPDELRRLDRHIMTIQIELESLKKETDTTSIERR 375
                 5799***************************************************************************************97776665 PP

   AAA_lid_9 101 ke 102
                 ++
  EPX72519.1 376 EK 377
                 55 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 2.5
   AAA_lid_9  67 kpeeleklekelaklekekealekeeekekaerl 100
                   +++++++ +l+k + e e+ ++e ++++a++l
  EPX72519.1 402 ALNNIKAAKMDLEKARIELERTQREGDYTRASEL 435
                 3345666667777777777777777777777666 PP

>> ClpB_D2-small  C-terminal, D2-small domain, of ClpB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.9   0.2   8.5e-28   3.3e-25       1      80 [.     701     780 ..     701     781 .. 0.97

  Alignments for each domain:
  == domain 1  score: 87.9 bits;  conditional E-value: 8.5e-28
                    SCHHHHHHHHHHHHHHHHHHSCTTTEEEEEHHHHHHHHHHHTSBTTTBTCCHHHHHHHHTHHHHHHHHHTTSSSTTSEEE CS
  ClpB_D2-small   1 LtkeelkkIvdlalkklekrlkergvelevtdealdalaekgydpeyGARpLrriiqreiedplaeeilsgelkegdtvr 80 
                    L++++l+ Iv+ +l+++++rl++r++ l+v+d+a+++laekgy+p yGARpL+r+iq++i+++la +i++g++k+ ++v 
     EPX72519.1 701 LSEKNLEGIVNVRLAEVQERLNDRRILLTVSDSAKKWLAEKGYSPSYGARPLNRLIQKKILNTLAMKIIQGDIKSDENVL 780
                    89************************************************************************988875 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.0   3.5e-11   1.4e-08       3     111 ..     138     250 ..     136     274 .. 0.77
   2 !   30.1   0.0   1.3e-09   5.2e-07       2     110 ..     537     654 ..     536     663 .. 0.72

  Alignments for each domain:
  == domain 1  score: 35.3 bits;  conditional E-value: 3.5e-11
                 EESSTTSSHHHHHHHHHHHH..........THEEEEEETTTCS..SSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHH CS
         AAA   3 lyGppGtGKTllakavakel..........gvefleisgsell..skyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqL 89 
                 l+Gp G+GKT++++ +a+ +          + +++ +++  l+   k+ g+ e++++ +++++++ ++++ilf+DE++ l +     + e + ++ n L
  EPX72519.1 138 LVGPAGVGKTAIMEGLATRIvrgevpesmkEKTVIVLDLGALIsgAKFRGDFEERLKSVLSDLEAAEGKVILFVDEMHLLLGFG---KAEGSIDASNLL 233
                 89*****************7665555544446699999999995567***************9888777***********9988...777788888888 PP

                 HHHHHHTTTSSSTEEEEEEESS CS
         AAA  90 lteldgvkkkeskvivigatnr 111
                  ++l + k       ++gat+ 
  EPX72519.1 234 KPALARGKL-----QCCGATTL 250
                 888777665.....35555554 PP

  == domain 2  score: 30.1 bits;  conditional E-value: 1.3e-09
                 EEESSTTSSHHHHHHHHHHHH...THEEEEEETTTCSSS............STT.HHHHHHHHHHHHHHHTSTS.EEEEEETGGGHHHHHTTCCCHHHH CS
         AAA   2 llyGppGtGKTllakavakel...gvefleisgsellsk............yvg.esekkirelfkeakekakp.silfiDEidalaksrsgseseeee 83 
                 l+ Gp G+GKT+l ka+a+ l   +  ++++++se+ +k            y+g e + ++ e +++   k  p  +l++DE+++ +++          
  EPX72519.1 537 LFLGPTGVGKTALTKALAEFLfdsEKAMIRFDMSEFQEKhtvsrlvgsppgYIGyEESGELTEAVRR---K--PyAVLLFDELEKAHNDV--------- 621
                 899*****************86656889*********8899***99999996662344445555543...3..559**********8777......... PP

                 HHHHHHHHHHHHTTTS........SSTEEEEEEES CS
         AAA  84 rvvnqLlteldgvkkk........eskvivigatn 110
                    n Ll++ld+             + +++++++n
  EPX72519.1 622 --TNILLQVLDEGFLTdaqgrkvdFRSTLIVMTSN 654
                 ..666666666543333444444344455555555 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.0    0.0025      0.98       4      26 ..     138     161 ..     136     216 .. 0.78
   2 !   39.0   0.0   1.9e-12   7.3e-10       2     122 ..     536     655 ..     535     666 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0025
                 EE--SSSSHHHHHHHGGGGB.S-- CS
       AAA_5   4 LvGppGtgKselaerlaaal.nre 26 
                 LvGp G+gK+ ++e la ++ + e
  EPX72519.1 138 LVGPAGVGKTAIMEGLATRIvRGE 161
                 9****************9997443 PP

  == domain 2  score: 39.0 bits;  conditional E-value: 1.9e-12
                 EEEE--SSSSHHHHHHHGGGGB.S--EEEEE--TT--HHHHH--B--............--------..G-SEEEEESGGG--HHHHHHHHHHHHSSEE CS
       AAA_5   2 vlLvGppGtgKselaerlaaal.nreveyvqltrdtteedlkgrreik...ngttslvdsplvraar..egeilvlDEveraesevlnsLlslleerrl 94 
                 +l +Gp+G+gK+ l++ la++l  +e  ++ +  +  +e+ + +r +    +     + ++l++a+r    ++l++DE+e+a+ +v+n+Ll++l+e  l
  EPX72519.1 536 FLFLGPTGVGKTALTKALAEFLfDSEKAMIRFDMSEFQEKHTVSRLVGsppGYIGYEESGELTEAVRrkPYAVLLFDELEKAHNDVTNILLQVLDEGFL 634
                 789********************7776666665444444444444444563556666789*******766689999********************988 PP

                 E..-SSSEEE---......-EEEEEESS CS
       AAA_5  95 lleeggelvkaknddllerfrviatanp 122
                   +  g+ v++++      + +++t+n 
  EPX72519.1 635 T-DAQGRKVDFRS------TLIVMTSNL 655
                 7.77777777877......677777775 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.1   6.2e-07   0.00024       2      50 ..     114     159 ..     113     173 .. 0.85
   2 ?    5.0   0.0     0.075        29     117     147 ..     187     217 ..     163     240 .. 0.79
   3 !   18.2   0.0   6.7e-06    0.0026       3      52 ..     506     561 ..     504     583 .. 0.74
   4 ?    0.3   0.0       2.1   8.1e+02     134     159 ..     603     629 ..     591     636 .. 0.77

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 6.2e-07
      AAA_16   2 lvGReeeleqLlsalervrsgrpelvllsGesGvGKsslvrellralek 50 
                 ++GReee+++  ++l+r  ++ p    l+G++GvGK+++++ l++++ +
  EPX72519.1 114 VIGREEEIQRTIQILSRRTKNNP---ALVGPAGVGKTAIMEGLATRIVR 159
                 78******888888887766665...889************99998876 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.075
      AAA_16 117 srllellkrllallsrderplvlvlDdlqwa 147
                  ++ e lk+ l+ l+  e +++l++D+++ +
  EPX72519.1 187 GDFEERLKSVLSDLEAAEGKVILFVDEMHLL 217
                 56778888888666666777*********64 PP

  == domain 3  score: 18.2 bits;  conditional E-value: 6.7e-06
      AAA_16   3 vGReeeleqLlsale..rvrsgrp......elvllsGesGvGKsslvrellralekdg 52 
                 +G +e l+++++a++  r  +g         + l+ G+ GvGK++l ++l++ l +++
  EPX72519.1 506 IGQDEALHAIADAVRlsR--AGLQssnrplASFLFLGPTGVGKTALTKALAEFLFDSE 561
                 688999999999999552..33333356699********************9887764 PP

  == domain 4  score: 0.3 bits;  conditional E-value: 2.1
      AAA_16 134 erp.lvlvlDdlqwadeaslqllaaLl 159
                 ++p  vl++D+l++a  +  ++l + l
  EPX72519.1 603 RKPyAVLLFDELEKAHNDVTNILLQVL 629
                 34559**********999999954444 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0      0.17        65       2      45 ..     115     156 ..     114     217 .. 0.70
   2 !   27.3   0.0   6.2e-09   2.4e-06      22     129 ..     529     641 ..     505     663 .. 0.77

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.17
                      ---SHHHHHHHHHHHHHCTSSS-EEEECSTTSSHHHHHHHHHHH CS
  Sigma54_activat   2 igesealkelleqikkvaktdlsvlitGesGtGKellaraihea 45 
                      ig++e+++++++ +++ +k+  +  ++G  G+GK+ + + + ++
       EPX72519.1 115 IGREEEIQRTIQILSRRTKN--NPALVGPAGVGKTAIMEGLATR 156
                      77888888888888776554..44578*******9987766553 PP

  == domain 2  score: 27.3 bits;  conditional E-value: 6.2e-09
                      S....S-EEEECSTTSSHHHHHHHHHHHSTTTTS-EEEEETTTS-TTCHHHHHHEBSSSSSTTTSS-BE..HHHHHTTTSEEEEETGGGS-HHH CS
  Sigma54_activat  22 d....lsvlitGesGtGKellaraiheaskrkekpfvavncaaipeelleseLFGhekGaFtGAekekk..GlfekadgGtlfLDeigelplel 109
                      +    +s l +G +G+GK+ l +a+ e    +ek ++++++++++e+   s+L G   G + G e++ +   ++++    +l++De+++   ++
       EPX72519.1 529 SnrplASFLFLGPTGVGKTALTKALAEFLFDSEKAMIRFDMSEFQEKHTVSRLVGSPPG-YIGYEESGEltEAVRRKPYAVLLFDELEKAHNDV 621
                      23455899***********************************************9999.78877765544667777789************** PP

                      HHHHHHHHHHSEEESBTSSS CS
  Sigma54_activat 110 QekLlrvlqegevervGssk 129
                       + Ll+vl+eg ++   ++k
       EPX72519.1 622 TNILLQVLDEGFLTDAQGRK 641
                      **********9877543333 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   2.9e-05     0.011       4     103 ..     132     217 ..     129     237 .. 0.62
   2 ?   -0.4   0.1       3.2   1.2e+03      37     104 ..     259     336 ..     245     372 .. 0.58
   3 !   10.3   0.2    0.0016      0.62      10      30 ..     538     558 ..     534     654 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 2.9e-05
      AAA_22   4 tagilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdl.lrellralglelkaerlsseellealeqalraravielliiDEaq 101
                 t++  +++G++G+GKT  ++ l+ +              v+ ++p+s++ k++   +l   +   + +  ++ ee l+ +   l+a+  +++l +DE++
  EPX72519.1 132 TKNNPALVGPAGVGKTAIMEGLATRI-------------VRGEVPESMKEKTViVLDLGALISGAKFR--GDFEERLKSVLSDLEAAEGKVILFVDEMH 215
                 677789****************9986.............56666666655555244444444433333..44444443333333333333666677776 PP

      AAA_22 102 hl 103
                  l
  EPX72519.1 216 LL 217
                 64 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 3.2
      AAA_22  37 e.....erpevvfvtlpsstsskdllrellralglelkaerlsseellealeqalrarav.....ielliiDEaqh.lr 104
                 +     +r + v +  ps+++s ++lr l + +++ +   r + + l++a +  +r   +     +++ ++DEa   lr
  EPX72519.1 259 KdaalaRRFQAVMIAEPSLSDSISILRGLKERYEVHHGV-RITDDSLVTAATYSSRYITDrflpdKAIDLVDEACSsLR 336
                 123445677888888888889999999998888876665.333333332222222222223335555556666655554 PP

  == domain 3  score: 10.3 bits;  conditional E-value: 0.0016
      AAA_22  10 vtGesGtGKTtllrrlleqld 30 
                   G++G+GKT l + l+e l 
  EPX72519.1 538 FLGPTGVGKTALTKALAEFLF 558
                 67***************9984 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.0   0.00018     0.069      45     106 ..     131     196 ..     117     223 .. 0.78
   2 ?   -2.6   0.1       9.8   3.8e+03       5      38 ..     410     443 ..     407     447 .. 0.81
   3 !   12.6   0.0   0.00022     0.085      49      78 ..     535     564 ..     527     634 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.00018
   IstB_IS21  45 ekkenivllGpsGvGKshlaialgveavr....aglsvlfvrvedLveelkrarrdgklaralkrl 106
                 ++k+n +l+Gp+GvGK+ +   l+++ vr    + ++   v v dL + ++ a+  g ++++lk++
  EPX72519.1 131 RTKNNPALVGPAGVGKTAIMEGLATRIVRgevpESMKEKTVIVLDLGALISGAKFRGDFEERLKSV 196
                 578999**************9999999984333445666677788888888888888887777765 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 9.8
   IstB_IS21   5 etrlrlaklpaqktledidfraarsldkrkvkeL 38 
                 ++ l++a+++ ++t  + d++ a +l+ +++ eL
  EPX72519.1 410 KMDLEKARIELERTQREGDYTRASELQYAIIPEL 443
                 5678889999999999999999999988888777 PP

  == domain 3  score: 12.6 bits;  conditional E-value: 0.00022
   IstB_IS21  49 nivllGpsGvGKshlaialgveavraglsv 78 
                 ++++lGp+GvGK+ l+ al+     +++++
  EPX72519.1 535 SFLFLGPTGVGKTALTKALAEFLFDSEKAM 564
                 6899***************98777665554 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.0    0.0001     0.039       5      50 ..     138     184 ..     136     218 .. 0.77
   2 !    9.2   0.0    0.0027       1.1       5      99 ..     538     623 ..     535     657 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 0.0001
                 EEC-TTTCHHHHHHHHHHHHCTS-SCCCC.-SEEEEEETTTTTTS-. CS
       NACHT   5 lqGeaGsGKTtLlqklalawaegklpqga.fklvFflslrelsrsgn 50 
                 l G+aG+GKT+ +++la+ + +g+ p+ +  k v++l l++l    +
  EPX72519.1 138 LVGPAGVGKTAIMEGLATRIVRGEVPESMkEKTVIVLDLGALISGAK 184
                 89**********************99987788999988887755555 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.0027
                 EEC-TTTCHHHHHHHHHHHHCTS-SCCCC-SEEEEEETTTTTTS-...-HCHHHCCCCTS--SSS-CCHHHHCCSCCCEEEEEE-STT-SS-TCH CS
       NACHT   5 lqGeaGsGKTtLlqklalawaegklpqgafklvFflslrelsrsgnarsladllfsqlpepaapvsevwavllelperlLlilDglDelvtdlgq 99 
                   G+ G+GKT+L + la+ + +++      k ++ + ++e++++    ++ +l+ s+   ++ + s   ++ ++++  ++l++D l+++++d  +
  EPX72519.1 538 FLGPTGVGKTALTKALAEFLFDSE------KAMIRFDMSEFQEKH---TVSRLVGSPPGYIGYEESGELTEAVRRKPYAVLLFDELEKAHNDVTN 623
                 68***************9999888......567889999999885...67888888888877777777888899999999999999988876655 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.0     0.001      0.39      32      57 ..     132     157 ..     118     217 .. 0.68
   2 !   13.0   0.0   0.00013     0.053      35      81 ..     535     581 ..     517     585 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.001
       AAA_7  32 nkkpvllvGptGtGKtviikdllkkl 57 
                  k++  lvGp+G+GKt+i++ l +++
  EPX72519.1 132 TKNNPALVGPAGVGKTAIMEGLATRI 157
                 4567789************9866544 PP

  == domain 2  score: 13.0 bits;  conditional E-value: 0.00013
       AAA_7  35 pvllvGptGtGKtviikdllkkldkekylsltinfsaqtsanqlqdi 81 
                 ++l+ GptG+GKt+++k l + l +++  ++ + +s   + +++ ++
  EPX72519.1 535 SFLFLGPTGVGKTALTKALAEFLFDSEKAMIRFDMSEFQEKHTVSRL 581
                 689***************99999989999999999988777776665 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.0    0.0002     0.079       4      41 ..     117     154 ..     115     162 .. 0.89
   2 ?    4.6   0.0     0.068        27      97     136 ..     184     221 ..     158     234 .. 0.79
   3 !    9.2   0.0    0.0026         1      26      71 ..     539     590 ..     527     633 .. 0.66

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.0002
    ATPase_2   4 RekelkeleeilerepneiyfiYGpegsGKtaLlkeii 41 
                 Re+e+++  +il+r +++   + Gp g+GKta++  ++
  EPX72519.1 117 REEEIQRTIQILSRRTKNNPALVGPAGVGKTAIMEGLA 154
                 9***********99999999999**********98766 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.068
    ATPase_2  97 eksklvfkaielllekikkkgkkiiiiiDelqklidlgln 136
                 + + + ++ ++++l +++    k+i+++De+  l   g+ 
  EPX72519.1 184 KFRGDFEERLKSVLSDLEAAEGKVILFVDEMHLLL--GFG 221
                 446678999*********************98877..554 PP

  == domain 3  score: 9.2 bits;  conditional E-value: 0.0026
    ATPase_2  26 YGpegsGKtaLlkeiienledkdkyviyyialreesiskldefie......e 71 
                  Gp g+GKtaL k ++e l d++k  i ++  + ++ +++++ ++       
  EPX72519.1 539 LGPTGVGKTALTKALAEFLFDSEKAMIRFDMSEFQEKHTVSRLVGsppgyiG 590
                 4******************999998887777776777777666666666663 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0     0.027        10      11      50 ..     121     161 ..     110     185 .. 0.68
   2 !   11.3   0.0   0.00043      0.17      24     201 ..     535     700 ..     504     706 .. 0.56

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.027
  Mg_chelatase  11 akralei.aaaGgHnlllvGppGsGKtmlakrlpsllppls 50 
                    +r+++i +   + n  lvGp+G GKt + + l++ + + +
    EPX72519.1 121 IQRTIQIlSRRTKNNPALVGPAGVGKTAIMEGLATRIVRGE 161
                   455666523445667889*********99988876554444 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 0.00043
  Mg_chelatase  24 nlllvGppGsGKtmlakrlpsllpplseeealevakiasvagkkeeekllkrrpfraphhsaskaalvGggs.kpkpGeislahnGvLfLDElpefk 119
                   ++l++Gp G GKt l k+l++ l + +++ ++   + +       +ek++ +r         s  + +G  +      ++ +    vL++DEl + +
    EPX72519.1 535 SFLFLGPTGVGKTALTKALAEFLFDSEKA-MIRFDMSE------FQEKHTVSRL------VGSPPGYIGYEEsGELTEAVRRKPYAVLLFDELEKAH 618
                   57999999999999999999999876543.22222211......1122222221......2233444554331222333444445677777777777 PP

  Mg_chelatase 120 rkvlevLRePledgevtisrakakvefparfqlvaamNpcpcgklkdkekectcsekeierYlsklsg....plldRidlqvevkk 201
                   ++v ++L + l++g +t + + +kv+f ++  +v++ N+     ++d+++++t  ++++++ ++ + g     +l+Rid q+  +k
    EPX72519.1 619 NDVTNILLQVLDEGFLTDA-QGRKVDFRST-LIVMTSNLGSEILVNDPSTTVT--PESRKKVIEMVQGyyppEFLNRIDEQIVFNK 700
                   7777777777777766544.3456666654.4556666666555555554443..3333333333333221146666666666555 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.0   0.00036      0.14       6      80 ..     137     221 ..     133     257 .. 0.76
   2 !    9.8   0.0     0.002      0.78       8      88 ..     539     630 ..     535     654 .. 0.61

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00036
      AAA_14   6 vitGaRrvGKTtllkqlikell.......vkkesilyinldderd.kkla.dpekllelileklke.ekktylflDEiqevpewe 80 
                 +++G+  vGKT +++ l+ +         +k++ ++ ++l      +k++ d+e+ l+ +l+ l++ e+k +lf DE++ + ++ 
  EPX72519.1 137 ALVGPAGVGKTAIMEGLATRIVrgevpesMKEKTVIVLDLGALISgAKFRgDFEERLKSVLSDLEAaEGKVILFVDEMHLLLGFG 221
                 589**************9777799999888888888888877544333334555445555554323489*********9985554 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.002
      AAA_14   8 tGaRrvGKTtllkqlikellvkkesilyinldderdkkladpe............kllelileklke........ekktylflDEiqevpe.wekalks 85 
                  G+  vGKT l k l++ l+   ++   i +d  +++++ + +            +          +        +   +l++DE  ++ + + ++l +
  EPX72519.1 539 LGPTGVGKTALTKALAEFLFD--SEKAMIRFDMSEFQEKHTVSrlvgsppgyigyEES--------GelteavrrKPYAVLLFDELEKAHNdVTNILLQ 627
                 6999***********988884..44455555555554433222233333333222111........122234422233459999998875425556666 PP

      AAA_14  86 lvd 88 
                 ++d
  EPX72519.1 628 VLD 630
                 555 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.0     0.005         2       3      24 ..     138     159 ..     137     175 .. 0.80
   2 !    9.4   0.0    0.0035       1.4       2      24 ..     537     559 ..     536     617 .. 0.86
   3 ?    0.4   0.0       2.2   8.6e+02      92     107 .]     640     655 ..     634     655 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.005
  RNA_helicase   3 lyGpsgeGKStlakeLakallk 24 
                   l+Gp+g+GK+ +++ La+++ +
    EPX72519.1 138 LVGPAGVGKTAIMEGLATRIVR 159
                   78***************99983 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.0035
  RNA_helicase   2 wlyGpsgeGKStlakeLakallk 24 
                   ++ Gp+g+GK+ l+k La+ l +
    EPX72519.1 537 LFLGPTGVGKTALTKALAEFLFD 559
                   589*************9987764 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 2.2
  RNA_helicase  92 kgtlftSkvvivtsNv 107
                    ++ f+S ++++tsN+
    EPX72519.1 640 RKVDFRSTLIVMTSNL 655
                   4588***********5 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.0     0.015       5.9       3      21 ..     138     156 ..     137     210 .. 0.82
   2 !   11.4   0.1   0.00094      0.37       3      22 ..     538     557 ..     537     734 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.015
      AAA_18   3 ltGtpGvGKttlakeLskr 21 
                 l G++GvGKt + + L+ r
  EPX72519.1 138 LVGPAGVGKTAIMEGLATR 156
                 89*************9887 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00094
      AAA_18   3 ltGtpGvGKttlakeLskrl 22 
                   G+ GvGKt l+k+L++ l
  EPX72519.1 538 FLGPTGVGKTALTKALAEFL 557
                 57**************8865 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.0     0.002      0.77       9      78 ..     118     193 ..     111     213 .. 0.75
   2 !    7.6   0.0    0.0087       3.4       8      53 ..     508     562 ..     505     567 .. 0.69

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.002
                 HHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S.........-EEEEESSHHHHHHHH..HHGGGGT CS
      ResIII   9 eeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkee....kflflvprkslleqtl..eefkkfl 78 
                 ee i+++++ l+ + +++  ++ + G+GKT ++  l+ r+ + +  e    k++++ +  +l++ ++   +f++ l
  EPX72519.1 118 EEEIQRTIQILSRRTKNNPALVGPAGVGKTAIMEGLATRIVRGEVPEsmkeKTVIVLDLGALISGAKfrGDFEERL 193
                 56788899888866677778*************8877777664333357779999999888888877666665554 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0087
                 HHHHHHHHT..............TTS..EEEEEESTTSTHHHHHHHHHHHH-S... CS
      ResIII   8 Qeeaienlleklks........krdk..rglikmaTGtGKTlvaaklierllkkgk 53 
                 Q ea+ ++++++          +r     +l+  +TG+GKT +  +l+e l+ ++k
  EPX72519.1 508 QDEALHAIADAVRLsraglqssNR-PlaSFLFLGPTGVGKTALTKALAEFLFDSEK 562
                 666777776444334444544422.1358899************999998888754 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.0    0.0095       3.7       3      79 ..     137     212 ..     135     217 .. 0.63
   2 ?    1.3   0.1       0.9   3.5e+02      26      95 ..     249     317 ..     233     388 .. 0.68
   3 ?    7.6   0.0     0.011       4.2       3      21 ..     537     555 ..     535     567 .. 0.90

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0095
      AAA_28   3 vitGgestGKTtlleaLaargyp.vvpEaareileeklakgedalpwvedllafaervleeqleeeaaaaankvlfcD 79 
                 +++G+ + GKT ++e La r ++  vpE++ e +   l+ g  ++ + + + +f+er l+  l++++aa+++ +lf+D
  EPX72519.1 137 ALVGPAGVGKTAIMEGLATRIVRgEVPESMKEKTVIVLDLGALISGA-KFRGDFEER-LKSVLSDLEAAEGKVILFVD 212
                 689***************99444367777776555444444444444.234455553.55555555555555555555 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.9
      AAA_28  26 vvpEaareileekl.akgedalpwvedllafaervleeqleeeaaaaankvlfcDrglldtlaYaraygge 95 
                 +++E+   i ++ + a++++a   +e  l   + +l+  +e+++     +v + D +l++ ++Y+ +y  +
  EPX72519.1 249 TLEEYRKYIEKDAAlARRFQAVMIAEPSLSDSISILRGLKERYEV--HHGVRITDDSLVTAATYSSRYITD 317
                 555544444444335566665554454555555555555444444..488999999999999999888775 PP

  == domain 3  score: 7.6 bits;  conditional E-value: 0.011
      AAA_28   3 vitGgestGKTtlleaLaa 21 
                  ++G+ + GKT l++aLa+
  EPX72519.1 537 LFLGPTGVGKTALTKALAE 555
                 689**************97 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0    0.0052         2      88     122 ..     122     156 ..      99     170 .. 0.74
   2 !    9.1   0.0    0.0029       1.1     102     121 ..     536     555 ..     514     580 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0052
                  TTHHHHHHHCTTSEEEEECSTTSSHHHHHHHHCTT CS
  RsgA_GTPase  88 egleelkellkdktsvlvGqSGvGKStLinallpe 122
                  + + ++ ++ +++  +lvG+ GvGK+++++ l+ +
   EPX72519.1 122 QRTIQILSRRTKNNPALVGPAGVGKTAIMEGLATR 156
                  4444555555666789************9998875 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0029
                  EEEECSTTSSHHHHHHHHCT CS
  RsgA_GTPase 102 svlvGqSGvGKStLinallp 121
                   +++G++GvGK++L +al++
   EPX72519.1 536 FLFLGPTGVGKTALTKALAE 555
                  689*************9986 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0    0.0044       1.7       4      43 ..     118     157 ..     115     165 .. 0.83
   2 !    9.2   0.0    0.0029       1.1      21      43 ..     535     557 ..     508     565 .. 0.73

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0044
                 HHHHHHHHHHHHHCHTEEEEEEESTTSSHHHHHHHHHHHT CS
        TsaE   4 eeetealgkklakalgdvilLeGdLGaGKTtlvrglakal 43 
                 eee+++  + l + +++  +L G+ G+GKT+++ gla  +
  EPX72519.1 118 EEEIQRTIQILSRRTKNNPALVGPAGVGKTAIMEGLATRI 157
                 6778888888888778899****************99876 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.0029
                 EEEEEESTTSSHHHHHHHHHHHT CS
        TsaE  21 vilLeGdLGaGKTtlvrglakal 43 
                  +l+ G+ G+GKT+l+++la+ l
  EPX72519.1 535 SFLFLGPTGVGKTALTKALAEFL 557
                 38899**************9866 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.0     0.051        20      14      34 ..     136     156 ..     128     186 .. 0.85
   2 ?   -1.6   1.5         9   3.5e+03      62      96 ..     354     389 ..     333     494 .. 0.62
   3 !   11.8   0.0   0.00068      0.26      15      52 ..     537     575 ..     531     648 .. 0.80

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.051
                 EEEEESTTSSHHHHHHHHTTS CS
                 xxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  14 vaivGenGaGKStLlkllagl 34 
                  a+vG+ G GK+ +++ la  
  EPX72519.1 136 PALVGPAGVGKTAIMEGLATR 156
                 58************9988765 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 9
                 EEE-SS.--S-TTSBHHHHHHHTCHHHHHHHSTTGG CS
                 xxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  62 gvlpqe.pqlfpeltvrenesdeeiekalsklglke 96 
                  +++ e ++l++e+   + e++e++ek ls+l+ ++
  EPX72519.1 354 MTIQIElESLKKETDTTSIERREKLEKKLSELRTDQ 389
                 444444333444433333344444444444443332 PP

  == domain 3  score: 11.8 bits;  conditional E-value: 0.00068
                 EEEESTTSSHHHHHHHHTTSS--.SEEEEEETTCEGGGB CS
                 xxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxx RF
    ABC_tran  15 aivGenGaGKStLlkllagllkp.teGeilldgkdlkeq 52 
                  ++G++G GK+ L k+la+ l + ++  i++d+ +++e+
  EPX72519.1 537 LFLGPTGVGKTALTKALAEFLFDsEKAMIRFDMSEFQEK 575
                 589***************976542777888888888872 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0   0.00058      0.23      21      41 ..     136     156 ..     122     240 .. 0.84
   2 ?    4.4   0.1     0.072        28      23      46 ..     538     561 ..     526     632 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00058
      AAA_30  21 avltGpAGtGKttalkalrea 41 
                  +l+GpAG GKt ++++l+  
  EPX72519.1 136 PALVGPAGVGKTAIMEGLATR 156
                 579*************99543 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.072
      AAA_30  23 ltGpAGtGKttalkalreaweaag 46 
                   Gp G GKt + kal+e + +++
  EPX72519.1 538 FLGPTGVGKTALTKALAEFLFDSE 561
                 679*************99876665 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   0.0    0.0002     0.077      37     113 ..     137     215 ..     130     236 .. 0.80
   2 ?    2.7   0.1      0.21        82      37      54 ..     537     554 ..     532     563 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.0002
      AAA_25  37 llaGapgtGKttlaldlalavatGkpwlgpvapeqgkVl....yvsaEdsedelrrRlravgealrddarllvldlagves 113
                 +l+G+ g+GKt++   la  +++G+ ++++++ + + Vl    ++s+   + ++++Rl+ v+ +l++ ++  +l ++++  
  EPX72519.1 137 ALVGPAGVGKTAIMEGLATRIVRGE-VPESMKEKTVIVLdlgaLISGAKFRGDFEERLKSVLSDLEAAEGKVILFVDEM-H 215
                 699**********************.88877666666664444566677788999999999999999999989887554.3 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.21
      AAA_25  37 llaGapgtGKttlaldla 54 
                 l+ G++g+GKt+l+  la
  EPX72519.1 537 LFLGPTGVGKTALTKALA 554
                 678**********98877 PP

>> DNA_pol3_delta2  DNA polymerase III, delta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       2.5   9.6e+02       6      98 ..     281     373 ..     278     383 .. 0.70
   2 !   13.8   0.0   9.3e-05     0.036      14     129 ..     528     631 ..     521     633 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 2.5
  DNA_pol3_delta2   6 lkilskalksgrlahayLfeGdegigkkelalnlakallceeknetkpcgecksckkieqgkhpDvivieteekersikldqirelieelsrk 98 
                      ++il++  ++ +++h   ++ d+ ++  ++  ++++  +  +k  +  ++ c+s +  ++ k  ++  ++ +  + +i+l+++++ ++++s +
       EPX72519.1 281 ISILRGLKERYEVHHGVRITDDSLVTAATYSSRYITDRFLPDKAIDLVDEACSSLRLQQESKPDELRRLDRHIMTIQIELESLKKETDTTSIE 373
                      567777777788888888888888888888888888888888887778888888877777777777777777775555556555555554444 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 9.3e-05
  DNA_pol3_delta2  14 ksgrlahayLfeGdegigkkelalnlakallceeknetkpcgecksckkieqgkhpDvivieteekersikldqirelieelsrkpreskkkii 107
                      +s+r   ++Lf G++g+gk +l+++la+ l+ +ek   +      +  +++ +kh    ++++      i  ++  el+e + rkp+     ++
       EPX72519.1 528 SSNRPLASFLFLGPTGVGKTALTKALAEFLFDSEKAMIR-----FDMSEFQ-EKHTVSRLVGSPPG--YIGYEESGELTEAVRRKPY----AVL 609
                      57888899************************9998662.....2333343.44444455555555..7*************99997....599 PP

  DNA_pol3_delta2 108 iiedaekmtksAaNalLktlEE 129
                      + ++ ek ++   N+lL++l E
       EPX72519.1 610 LFDELEKAHNDVTNILLQVLDE 631
                      ******************9988 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.0     0.036        14       4      22 ..     138     156 ..     137     173 .. 0.81
   2 !    9.6   0.0    0.0026         1       3      37 ..     537     570 ..     535     581 .. 0.77

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.036
                 EESSTTSSHHHHHHCHCT- CS
         Roc   4 lvGdsgvGKtsllkrfved 22 
                 lvG +gvGKt +++ + ++
  EPX72519.1 138 LVGPAGVGKTAIMEGLATR 156
                 8***********9877654 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.0026
                 EEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEE CS
         Roc   3 vlvGdsgvGKtsllkrfvedkfsekekstigvdfl 37 
                 +++G +gvGKt l k + e  f+++ k++i  d++
  EPX72519.1 537 LFLGPTGVGKTALTKALAEFLFDSE-KAMIRFDMS 570
                 789***************9999755.566666654 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.0     0.015       5.7      21      44 ..     132     155 ..     122     161 .. 0.80
   2 !    7.9   0.0    0.0063       2.5      24      47 ..     535     558 ..     525     568 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.015
      AAA_29  21 lkgatlltGpsGsGKSTllDAiqa 44 
                 +k++  l+Gp G+GK++++  +++
  EPX72519.1 132 TKNNPALVGPAGVGKTAIMEGLAT 155
                 445789************987765 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0063
      AAA_29  24 atlltGpsGsGKSTllDAiqalLv 47 
                 ++l+ Gp+G+GK++l  A++  L 
  EPX72519.1 535 SFLFLGPTGVGKTALTKALAEFLF 558
                 489************999887665 PP

>> HAUS2  HAUS augmin-like complex subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   2.8     1e-05    0.0041      46     102 ..     345     401 ..     336     409 .. 0.92
   2 ?   -0.8   0.0       2.7   1.1e+03      43      69 ..     402     428 ..     400     437 .. 0.86

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 1e-05
       HAUS2  46 elsavqrelaklnlElqlrkddkdvadlthvselekkcealqrvtthLkavikeKdr 102
                 el  + r++  +++El+ +k++ d++ +   ++lekk  +l   +++L+a+ +e ++
  EPX72519.1 345 ELRRLDRHIMTIQIELESLKKETDTTSIERREKLEKKLSELRTDQEKLSAIWEEERS 401
                 6777899********************************************988765 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 2.7
       HAUS2  43 vLrelsavqrelaklnlElqlrkddkd 69 
                 +L ++ a + +l+k  +El++ +++ d
  EPX72519.1 402 ALNNIKAAKMDLEKARIELERTQREGD 428
                 78889999999***********99976 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.7       0.1        40      38      95 ..     138     216 ..     110     222 .. 0.51
   2 !   10.1   0.0    0.0013       0.5      15      55 ..     515     555 ..     500     565 .. 0.73
   3 ?   -2.2   0.0       7.9   3.1e+03      83     110 ..     604     631 ..     592     638 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.1
      RuvB_N  38 lyGpPGlGkttlak.....iiakelgvklkitsgPvle......k...agd....laalltnleekd...vlfideihr 95 
                 l+Gp G+Gkt++ +     i+  e+  ++k  +  vl+           gd    l ++l++le+ +   +lf+de+h 
  EPX72519.1 138 LVGPAGVGKTAIMEglatrIVRGEVPESMKEKTVIVLDlgalisGakfRGDfeerLKSVLSDLEAAEgkvILFVDEMHL 216
                 6788888888765411111444444444444333222211111111111221112556666666543333677777775 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.0013
      RuvB_N  15 vkeklkifieaakkreealdhvllyGpPGlGkttlakiiak 55 
                 + + +++  +  ++ +++l   l+ Gp G+Gkt+l+k +a+
  EPX72519.1 515 IADAVRLSRAGLQSSNRPLASFLFLGPTGVGKTALTKALAE 555
                 334444455555778899999***************99997 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 7.9
      RuvB_N  83 eekdvlfideihrlsraveevlysamed 110
                 ++  vl+ de+ + ++ v ++l + +++
  EPX72519.1 604 KPYAVLLFDELEKAHNDVTNILLQVLDE 631
                 56689999*******9999999887764 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.0     0.016       6.4       3      93 ..     137     203 ..     137     215 .. 0.75
   2 ?   -1.8   0.3       5.6   2.2e+03      45     120 ..     349     425 ..     323     452 .. 0.55
   3 ?    6.4   0.0     0.018         7       3      26 ..     537     569 ..     535     602 .. 0.66
   4 ?   -1.3   0.0         4   1.6e+03     255     267 ..     603     615 ..     599     617 .. 0.79

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.016
      AAA_21   3 vliGpNgsGKSnLLdaldllarldrdvegltdelsggggirkipslldlydpeipfefeieeflsqgvryryglrlersqveeklssvetl 93 
                 +l+Gp g+GK+ +++ l                      +r+++++ ++  +e+ +   +   l++g ++r+ ++   + v   ls++e  
  EPX72519.1 137 ALVGPAGVGKTAIMEGL---------------------ATRIVRGEVPESMKEKTVIVLDLGALISGAKFRGDFEERLKSV---LSDLEAA 203
                 69***************.....................7777777777777777777777777777777777777777777...5555555 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 5.6
      AAA_21  45 ipslldlydpeipfefeieeflsqgvryryglrlersqv.eeklssvetllesgllldkrsleeedvfnpeargirg 120
                  ++ + ++++e ++    +++ s + r + + +l + +  +ekls+  + ++s l   k ++ +  +   e +++  
  EPX72519.1 349 LDRHIMTIQIELESLKKETDTTSIERREKLEKKLSELRTdQEKLSAIWEEERSALNNIKAAKMDLEKARIELERTQR 425
                 44444444554444444444555555555555555555555555555555555555555555444444444444444 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.018
      AAA_21   3 vliGpNgsGKSnLLdald.llarl........d 26 
                 ++ Gp g+GK+ L +al  +l++         +
  EPX72519.1 537 LFLGPTGVGKTALTKALAeFLFDSekamirfdM 569
                 689**************4133333533333333 PP

  == domain 4  score: -1.3 bits;  conditional E-value: 4
      AAA_21 255 lkkgsllliDEpE 267
                 +k+ ++ll+DE+E
  EPX72519.1 603 RKPYAVLLFDELE 615
                 45559*******9 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.038        15       4      23 ..     135     167 ..     132     216 .. 0.70
   2 !    8.0   0.0    0.0054       2.1       5      82 ..     536     622 ..     534     632 .. 0.69

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.038
      AAA_24   4 kiliyGpsgiGKTtlakel.............g 23 
                 + +++Gp+g+GKT ++  l             +
  EPX72519.1 135 NPALVGPAGVGKTAIMEGLatrivrgevpesmK 167
                 5689**********9998855555544444443 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0054
      AAA_24   5 iliyGpsgiGKTtlakelgpkplfidtekGlksldadkfpdieswedfldevvel..................aaeladyktlviDtideleelcl 82 
                 +l  Gp g+GKT l k l  ++ ++d ek + + d  +f++ +++         l                  a   ++y +l +D ++++ + ++
  EPX72519.1 536 FLFLGPTGVGKTALTKAL-AEF-LFDSEKAMIRFDMSEFQEKHTVSR-------LvgsppgyigyeesgelteAVRRKPYAVLLFDELEKAHNDVT 622
                 6778**************.555.569999888888888875442222.......133344445666666666666777888888888888877665 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0     0.035        14       5      26 ..     137     158 ..     133     173 .. 0.86
   2 ?    7.5   0.0    0.0071       2.8       4      30 ..     536     562 ..     533     569 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.035
                 EEEESTTSSHHHHHHHHHHHHH CS
       SRP54   5 llvGlqGaGKTttlaKLaallk 26 
                 +lvG+ G+GKT  +  La ++ 
  EPX72519.1 137 ALVGPAGVGKTAIMEGLATRIV 158
                 69************99998876 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0071
                 EEEEESTTSSHHHHHHHHHHHHHHTTS CS
       SRP54   4 illvGlqGaGKTttlaKLaallkkegk 30 
                 +l++G++G+GKT  +  La+ l +++k
  EPX72519.1 536 FLFLGPTGVGKTALTKALAEFLFDSEK 562
                 79*****************99877655 PP

>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0     0.077        30       2      18 ..     139     155 ..     138     175 .. 0.88
   2 ?    7.7   0.0    0.0068       2.7       2      25 ..     539     562 ..     538     569 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.077
  ATP_bind_1   2 vGpaGsGKttfvgalse 18 
                 vGpaG+GKt +++ l+ 
  EPX72519.1 139 VGPAGVGKTAIMEGLAT 155
                 8*********9998865 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.0068
  ATP_bind_1   2 vGpaGsGKttfvgalseilelrgr 25 
                 +Gp G+GKt +++al+e+l ++++
  EPX72519.1 539 LGPTGVGKTALTKALAEFLFDSEK 562
                 7*****************988754 PP

>> AAA_31  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.4     0.018       6.9      37     103 ..     359     426 ..     345     447 .. 0.78
   2 ?    5.1   0.0     0.048        19      12      38 ..     543     569 ..     541     627 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.018
      AAA_31  37 DlDpQanattglgie.kneiektlyevlieeknikeaiiktkvenldlipssidLaeaeielvelekk 103
                 +l + +  t +++ie ++++ek+l e+ +++++++ +  ++++  +++  +++dL +a iel +++++
  EPX72519.1 359 ELESLKKETDTTSIErREKLEKKLSELRTDQEKLSAIWEEERSALNNIKAAKMDLEKARIELERTQRE 426
                 55555666777778526779*******9999999999997777777****************998877 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.048
      AAA_31  12 GvGKTTtsvnlaaalaklgkkvLlvDl 38 
                 GvGKT+ + +la++l  ++k ++  D+
  EPX72519.1 543 GVGKTALTKALAEFLFDSEKAMIRFDM 569
                 9***************99998887776 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       2.8   1.1e+03     121     151 ..     127     155 ..     101     172 .. 0.68
   2 ?   11.2   0.0   0.00037      0.14     128     174 ..     532     577 ..     372     610 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 2.8
       T2SSE 121 vlrkavrerglilvsGgTgsGKttllyallk 151
                 +l++   ++ +  + G+ g GKt ++  l +
  EPX72519.1 127 ILSRR--TKNNPALVGPAGVGKTAIMEGLAT 155
                 33333..46667788********98766555 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00037
       T2SSE 128 erglilvsGgTgsGKttllyallkeinksderivtvEDpvEiqlega 174
                    ++l+ G+Tg GKt l+ al +++ +s e+ ++  D  E q ++ 
  EPX72519.1 532 PLASFLFLGPTGVGKTALTKALAEFLFDS-EKAMIRFDMSEFQEKHT 577
                 4578999*****************99999.66666678888876664 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.066        26       4      21 ..     138     155 ..     137     188 .. 0.88
   2 ?    0.3   0.1       1.8     7e+02      75      95 ..     481     501 ..     384     507 .. 0.67
   3 ?    5.9   0.1     0.035        14       3      22 ..     537     556 ..     536     722 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.066
      AAA_33   4 lvGlpGsGKstlaerllk 21 
                 lvG++G+GK+   e+l+ 
  EPX72519.1 138 LVGPAGVGKTAIMEGLAT 155
                 79***********99974 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 1.8
      AAA_33  75 ldatnlsrrerarflklarrl 95 
                 +  tnl+r er+r+l++ + +
  EPX72519.1 481 IPTTNLMRGERDRLLHMEQTI 501
                 344578888888877776655 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.035
      AAA_33   3 llvGlpGsGKstlaerllkk 22 
                 l+ G+ G+GK+ l + l++ 
  EPX72519.1 537 LFLGPTGVGKTALTKALAEF 556
                 799***********999864 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2  18.2       2.4   9.2e+02      24     199 ..     138     420 ..     122     461 .. 0.57
   2 ?   10.6   0.1    0.0015       0.6      22      50 ..     536     564 ..     534     726 .. 0.73

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 2.4
      AAA_23  24 ItGpNGaGKTTildAikl.aLygetprlsrks.......grgfeksdveiesegkvkayveltfenkdgry............................ 86 
                 ++Gp G GKT+i++ +   +  ge+p+  +++       g  +  ++++  +e +  ++v  ++e   g+                             
  EPX72519.1 138 LVGPAGVGKTAIMEGLATrIVRGEVPESMKEKtvivldlGALISGAKFRGDFE-ERLKSVLSDLEAAEGKVilfvdemhlllgfgkaegsidasnllkp 235
                 78999999999999999745679998888888899996633333333333333.333333333444444445555555566666666666666666666 PP

      AAA_23  87 ............................................................trsiererelskkkgkttkkaklellei.deleqfisel 124
                                                                              ++i+++  ++                  + + ++i++ 
  EPX72519.1 236 alargklqccgattleeyrkyiekdaalarrfqavmiaepslsdsisilrglkeryevhhGVRITDDSLVT----------------AaTYSSRYITDR 318
                 77777777777666666655666666777777777777555544433333333322222211111111111................122222222222 PP

      AAA_23 125 lgskki.....ilnlilflgqer..........................feefelkdkkerleelekeleeledekkllekl.eqekekekeleeleee 191
                 +  +k+     +      + + r                           +++ + +  er e+lek+l el +++++l +  e+e +  +++++ + +
  EPX72519.1 319 FLPDKAidlvdE-----ACSSLRlqqeskpdelrrldrhimtiqielesLKKETDTTSIERREKLEKKLSELRTDQEKLSAIwEEERSALNNIKAAKMD 412
                 222222122210.....1111111111112222222222222222223233344445555777777777777777777777677888888888888888 PP

      AAA_23 192 leeilkel 199
                 le++  el
  EPX72519.1 413 LEKARIEL 420
                 88877666 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.0015
      AAA_23  22 tlItGpNGaGKTTildAiklaLygetprl 50 
                 +l+ Gp+G GKT++  A+   L+   + +
  EPX72519.1 536 FLFLGPTGVGKTALTKALAEFLFDSEKAM 564
                 89****************99998865444 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.0    0.0046       1.8       2      38 ..     118     151 ..     117     160 .. 0.79
   2 ?    1.8   0.0      0.29   1.1e+02      24      40 ..     537     553 ..     523     573 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0046
                 HHHHHHHHHHHHCTTTSCSEEEEEEESTTSSHHHHHH CS
      NB-ARC   2 eksvekviekLlekdelqslvvalvGmgGvGKttlak 38 
                 e+++++ i+ L++  + +    alvG +GvGKt +++
  EPX72519.1 118 EEEIQRTIQILSRRTKNN---PALVGPAGVGKTAIME 151
                 778888899999754444...58***********997 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.29
                 EEEESTTSSHHHHHHHH CS
      NB-ARC  24 alvGmgGvGKttlakqi 40 
                  + G  GvGKt l k  
  EPX72519.1 537 LFLGPTGVGKTALTKAL 553
                 467*********98754 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.99   3.9e+02      13      40 ..     130     157 ..     118     164 .. 0.75
   2 ?   -2.8   0.0       7.9   3.1e+03     128     173 ..     270     319 ..     250     329 .. 0.60
   3 ?    8.7   0.0    0.0024      0.94      12      58 ..     528     576 ..     518     587 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.99
  Zeta_toxin  13 qerPklillgGqpGAGKselaellkdel 40 
                 ++++    l+G  G GK++++e l++++
  EPX72519.1 130 RRTKNNPALVGPAGVGKTAIMEGLATRI 157
                 555555668999*********9998876 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 7.9
  Zeta_toxin 128 vvavkkelSrlgvldRyeeevae...g.Rlvpkeehdeafeglresveal 173
                 v+++++ lS +    R ++e +e   g R+++ +   +a +  r  ++++
  EPX72519.1 270 VMIAEPSLSDSISILRGLKERYEvhhGvRITDDSLVTAATYSSRYITDRF 319
                 34445555655555555555333333668888887777777766666665 PP

  == domain 3  score: 8.7 bits;  conditional E-value: 0.0024
  Zeta_toxin  12 sqerPklill.gGqpGAGKselaellkdele.rqgnvvrldpDdlRelh 58 
                 s++rP + +l  G +G GK++l ++l++ l  +++ ++r+d  +++e h
  EPX72519.1 528 SSNRPLASFLfLGPTGVGKTALTKALAEFLFdSEKAMIRFDMSEFQEKH 576
                 56888887663699**************99989*************998 PP

>> Orbi_NS1  Orbivirus non-structural protein NS1, or hydrophobic tubular protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00034      0.13      98     197 ..     239     345 ..     235     358 .. 0.69

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00034
    Orbi_NS1  98 egkmkrcgaqlledyrksgmmdeavkq.salvnserirlddslsampyi...y.....vpindgqivn.ptfisryrqiayyfynpdaaddwidpnlfg 186
                  gk++ cga  le+yrk    d a+ +    v      l ds+s +  +   y     v i d  +v   t+ sry  i+   + pd a d +d     
  EPX72519.1 239 RGKLQCCGATTLEEYRKYIEKDAALARrFQAVMIAEPSLSDSISILRGLkerYevhhgVRITDDSLVTaATYSSRY--ITDR-FLPDKAIDLVDEACSS 334
                 69********************998541344555556899999987533111222344778777766516788887..4444.469999*****99999 PP

    Orbi_NS1 187 irgqhnqikre 197
                 +r q++    e
  EPX72519.1 335 LRLQQESKPDE 345
                 99887765443 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0     0.043        17      10      44 ..     122     158 ..     114     200 .. 0.79
   2 ?    4.5   0.0     0.055        21      24      41 ..     538     555 ..     529     567 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.043
                 HHHHHHHH..H-SEEEEE--TTSSTTHHHHHHHHHHH CS
        PhoH  10 keylealk..kndivfaiGpaGtGKtylavalaveal 44 
                 ++++++l+  +++    +GpaG GKt +   la +++
  EPX72519.1 122 QRTIQILSrrTKNNPALVGPAGVGKTAIMEGLATRIV 158
                 555666665555567789********99877777666 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.055
                 EE--TTSSTTHHHHHHHH CS
        PhoH  24 aiGpaGtGKtylavalav 41 
                  +Gp+G GKt l+ ala 
  EPX72519.1 538 FLGPTGVGKTALTKALAE 555
                 58***********99985 PP

>> DUF87  Helicase HerA, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.0    0.0089       3.5      27      59 ..     137     175 ..     127     177 .. 0.94
   2 ?   -0.3   1.9       2.5   9.6e+02     128     168 ..     363     413 ..     320     453 .. 0.52
   3 ?    6.0   0.0     0.029        11      26      60 ..     536     569 ..     533     573 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0089
       DUF87  27 AilgsTGsGKSntvavLleelle......kkgatililD 59 
                 A +g +G+GK+  +  L  ++++       k  t+++lD
  EPX72519.1 137 ALVGPAGVGKTAIMEGLATRIVRgevpesMKEKTVIVLD 175
                 78999**********************999999*****9 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 2.5
       DUF87 128 akakeekeklssdepveklleelk..........kekeelrklknqaiarl 168
                 +k++++ +++  +e +ek l+el+          +e++++ ++ + a++ l
  EPX72519.1 363 LKKETDTTSIERREKLEKKLSELRtdqeklsaiwEEERSALNNIKAAKMDL 413
                 222223333333333333333333333333333233333333333333333 PP

  == domain 3  score: 6.0 bits;  conditional E-value: 0.029
       DUF87  26 lAilgsTGsGKSntvavLleellekkgatililDp 60 
                 ++ lg TG+GK+ +++ L e l  +    ++ +D+
  EPX72519.1 536 FLFLGPTGVGKTALTKALAEFLF-DSEKAMIRFDM 569
                 6679***************9999.66666666665 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.1     0.025       9.6       9      38 ..     132     161 ..     122     174 .. 0.75
   2 ?    2.7   0.0      0.37   1.4e+02      13      38 ..     536     561 ..     527     575 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.025
      AAA_19   9 kekvllvtaGpGtGKTrvlkhivallvelg 38 
                 ++++ ++++++G GKT ++++  + +v+ +
  EPX72519.1 132 TKNNPALVGPAGVGKTAIMEGLATRIVRGE 161
                 55667899**********999888777655 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.37
      AAA_19  13 llvtaGpGtGKTrvlkhivallvelg 38 
                 +l +++ G GKT ++k+  + l + +
  EPX72519.1 536 FLFLGPTGVGKTALTKALAEFLFDSE 561
                 5678999********99998887665 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0       2.2   8.4e+02       6      22 ..     138     154 ..     135     166 .. 0.87
   2 ?    9.2   0.0    0.0025      0.96       5      23 ..     537     555 ..     534     589 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 2.2
   PduV-EutP   6 liGkvgsGKttLtqalk 22 
                 l+G+ g+GKt++++ l 
  EPX72519.1 138 LVGPAGVGKTAIMEGLA 154
                 89********9988775 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.0025
   PduV-EutP   5 lliGkvgsGKttLtqalkg 23 
                 l++G++g+GKt+Lt+al +
  EPX72519.1 537 LFLGPTGVGKTALTKALAE 555
                 89**************986 PP

>> DUF5315  Disordered region of unknown function (DUF5315)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   4.0    0.0018      0.71       3      65 ..     339     400 ..     337     412 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.0018
     DUF5315   3 rseskpsvdrqDalWaeid.tLddVklsAeegkkthvFgeehekaLeelReaqikLaqawrrse 65 
                 +++++ +  r D++   i+  L+  k+   +++ ++   e+ ek+L elR+ q kL  +w +++
  EPX72519.1 339 QESKPDELRRLDRHIMTIQiELESLKKETDTTSIER--REKLEKKLSELRTDQEKLSAIWEEER 400
                 556666778889999999999999999999995555..79********************9883 PP

>> DUF1640  Protein of unknown function (DUF1640)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   9.0    0.0028       1.1      47     127 ..     348     428 ..     331     462 .. 0.90

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.0028
     DUF1640  47 elekseylqkaalselrkevqisersefaalrseteklqreleklkqkLreeidklkadirldlnleKgrireelakleak 127
                  l++++++++ +l++l+ke  +   +  ++l+++  +l+++ ekl    +ee + l++    +++leK+ri+ e ++ e  
  EPX72519.1 348 RLDRHIMTIQIELESLKKETDTTSIERREKLEKKLSELRTDQEKLSAIWEEERSALNNIKAAKMDLEKARIELERTQREGD 428
                 57899*****************************************************999***********999888765 PP

>> Prefoldin  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0       2.2   8.7e+02      18      90 ..     117     201 ..     104     207 .. 0.70
   2 ?   -1.2   0.0       4.6   1.8e+03       6      46 ..     261     300 ..     256     309 .. 0.74
   3 ?    7.4   0.1      0.01         4      76     118 ..     322     364 ..     319     366 .. 0.93
   4 ?    0.4   1.5       1.5     6e+02       2      30 ..     379     407 ..     373     430 .. 0.57

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 2.2
                 HHHHHHHHHHHHHHHTT.........-TT-EEEEEEETTEEEEEE--STTE....EEEEEETTEEEEEEHHHHHHHHHHHHHHHH CS
   Prefoldin  18 aieelektletlktlkk........edegkevlvplgaglyvkaevkdtdk....vlvdlGagyyveksleeAiellkkkleele 90 
                 + ee+++t+++l++  k        ++ gk++ ++  a+ +v++ev++  k    +++dlGa ++  k   + +e lk  l++le
  EPX72519.1 117 REEEIQRTIQILSRRTKnnpalvgpAGVGKTAIMEGLATRIVRGEVPESMKektvIVLDLGALISGAKFRGDFEERLKSVLSDLE 201
                 6677777777777766667777777777777777777788888899555555888888999877777777777777776666666 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 4.6
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHTT.-TT-EEEEEEE CS
   Prefoldin   6 eslqaelaqlkeaieelektletlktlkkedegkevlvplg 46 
                 ++l+++++++  a ++l +++++l+ lk+   +++  v ++
  EPX72519.1 261 AALARRFQAVMIAEPSLSDSISILRGLKE-RYEVHHGVRIT 300
                 67889999999999***********9999.44444445555 PP

  == domain 3  score: 7.4 bits;  conditional E-value: 0.01
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Prefoldin  76 eeAiellkkkleelekqlekleeeleklkdqittleanlaqly 118
                 ++Ai+l+++ +++l+ q+e+  +el+ l + i t++ +l+ l 
  EPX72519.1 322 DKAIDLVDEACSSLRLQQESKPDELRRLDRHIMTIQIELESLK 364
                 89**********************************9998775 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 1.5
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Prefoldin   2 keeleslqaelaqlkeaieelektletlk 30 
                 +++l++l++++++l++  ee +++l+++k
  EPX72519.1 379 EKKLSELRTDQEKLSAIWEEERSALNNIK 407
                 33344444444444444444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (799 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1275  (0.0711138); expected 358.6 (0.02)
Passed bias filter:                      695  (0.038764); expected 358.6 (0.02)
Passed Vit filter:                       115  (0.00641419); expected 17.9 (0.001)
Passed Fwd filter:                        46  (0.00256568); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              46  [number of targets reported over threshold]
# CPU time: 0.94u 0.34s 00:00:01.28 Elapsed: 00:00:00.48
# Mc/sec: 4974.89
//
Query:       EPX72520.1  [L=180]
Description: ADP-ribosylation factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.2e-80  267.0   0.1      6e-80  266.8   0.1    1.0  1  Arf        ADP-ribosylation factor family
    1.7e-14   54.1   0.0    2.4e-14   53.6   0.0    1.2  1  Roc        Ras of Complex, Roc, domain of DAPkinase
    6.3e-14   51.8   0.0    7.8e-14   51.5   0.0    1.1  1  SRPRB      Signal recognition particle receptor beta subunit
      4e-13   49.3   0.9    4.5e-09   35.9   0.4    2.3  2  G-alpha    G-protein alpha subunit
    1.1e-12   47.8   0.0    1.2e-12   47.8   0.0    1.1  1  Ras        Ras family
    7.1e-11   41.9   0.0    8.6e-11   41.6   0.0    1.1  1  Gtr1_RagA  Gtr1/RagA G protein conserved region
    3.8e-06   27.0   0.0    6.1e-06   26.3   0.0    1.3  1  MMR_HSR1   50S ribosome-binding GTPase
     0.0076   15.6   0.1      0.013   14.8   0.0    1.4  2  6PF2K      6-phosphofructo-2-kinase


Domain annotation for each model (and alignments):
>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  266.8   0.1   2.7e-83     6e-80       2     174 ..       6     176 ..       5     177 .. 0.98

  Alignments for each domain:
  == domain 1  score: 266.8 bits;  conditional E-value: 2.7e-83
                 HHHHHGGTT.TTEEEEEEEESTTSSHHHHHHHHHHSSCEECSSSSSEEEEEEEETTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHH CS
         Arf   2 lsilaklklkkkelrilllGLDnaGKtTilkklkleelvttvPTigfnveeleiknlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleea 100
                 ++++++l++ k+e+ril++GLD+aGKtTil+klkl+e+vtt+PTigfnve++e++n++ftvwDvGGq+k+RplW++Yf++t+++ifvvDs+dreR++ea
  EPX72520.1   6 SKLFQSLFG-KREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYRNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERISEA 103
                 688999999.***************************************************************************************** PP

                 HHHHHHHCTSGCCTTSEEEEEEE-TTSTTSS-HHHHHHHTTGGGSSSSSSEEEEEEBTTTTBTHHHHHHHHHHH CS
         Arf 101 keeLkalleeeelkevallvlaNKqDlpealseeelrellgleelkgkrkleiqkcsavkgeglkeglewlses 174
                 +eeL+++l+e+el+++ llv+aNKqDlp+a++++e++++lgl++l+ +r+++iq+++a++g+gl+eglewls +
  EPX72520.1 104 HEELQRMLNEDELRDALLLVFANKQDLPNAMNAAEITDKLGLHSLR-HRQWYIQATCATSGDGLYEGLEWLSTN 176
                 **********************************************.************************986 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.6   0.0   1.1e-17   2.4e-14       1     119 [.      19     129 ..      19     130 .. 0.82

  Alignments for each domain:
  == domain 1  score: 53.6 bits;  conditional E-value: 1.1e-17
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEEGHHHHCHHHHH CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvydsrssenlkeWl 99 
                 ++++vG  ++GKt++l ++  +++  ++ +tig ++ t e+            +++++ +WD++Gq+++r l ++y+++ + +i+v+ds++ e+++e  
  EPX72520.1  19 RILMVGLDAAGKTTILYKLKLGEIV-TTIPTIGFNVETVEY------------RNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERISEAH 104
                 699*******************996.568*****9966443............4689*******************************99998888888 PP

                 HHHHHHCSSS....-.EEEEEE-TT CS
         Roc 100 kelkkvagks....p.vilvgnkiD 119
                 +el+++ +++      +++ +nk D
  EPX72520.1 105 EELQRMLNEDelrdAlLLVFANKQD 129
                 8888776654122231455679988 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.5   0.0   3.5e-17   7.8e-14       3     137 ..      17     143 ..      15     152 .. 0.89

  Alignments for each domain:
  == domain 1  score: 51.5 bits;  conditional E-value: 3.5e-17
                 --EEEEE-STTSSHHHHHHHHHHSS---B---S.S-EEETTG...GGTT-SEEEETT-GCCSHHHHHHHHHHGGEEEEEEEEETTS-HHHHHHHHHHHH CS
       SRPRB   3 kpavllvGlsdsGKTslftrLttdsvkktvtSq.essaalkvksekgskltliDfPGheklrqklleklkaksslkglvfvvDStidpkevkevAElly 100
                 + ++l+vGl  +GKT+++ +L  +++ +t   +  +  + ++   ++ ++t+ D+ G++k+r     +  + ++ +g++fvvDS  d  ++ e  E l 
  EPX72520.1  17 EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIgFNVETVEY---RNISFTVWDVGGQDKIRPL-WRH--YFQNTQGIIFVVDSN-DRERISEAHEELQ 108
                 6789*****************************888899999...*****************75.555..57889********97.7889********* PP

                 HHHHHHHHHTT---EEEEEE-TTSTT---HHHHHHHH CS
       SRPRB 101 eilliteklkdavdiliACnKqelflakspklikdaL 137
                  +l + e l+da+ +l+  nKq+l  a ++  i d+L
  EPX72520.1 109 RMLNEDE-LRDAL-LLVFANKQDLPNAMNAAEITDKL 143
                 ***9999.66766.67777**************9988 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.0   4.2e-05     0.093      21      45 ..      15      39 ..       5      43 .. 0.89
   2 !   35.9   0.4     2e-12   4.5e-09     185     281 ..      45     130 ..      35     133 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 4.2e-05
                ..EEEEEEEESTTSSHHHHHHHHHH CS
     G-alpha 21 krevkllllGqseSGKsTilkqlkl 45
                kre+++l++G +  GK+Til +lkl
  EPX72520.1 15 KREMRILMVGLDAAGKTTILYKLKL 39
                689*****************99985 PP

  == domain 2  score: 35.9 bits;  conditional E-value: 2e-12
                 -----SEEEEEEECT-TEEEEEEEE-SSHHHHHGTCCCTTTECEEEEEEEGGGTT-B-SS-TTSBHHHHHHHHHHCCCC-GGGTTSEEEEEEE-HHH CS
     G-alpha 185 rlktvGisetkfevdsklefrivdvgGqrserkkWvpffddvdaiiFlvslsefdqvlyedekvnrleeslklFkeicnnkllkntpiiLflnKlDi 281
                  ++t+G++  ++e++ +++f+++dvgGq + r+ W ++f++++ iiF+v           ++   r+ e+ +  + ++n+ +l+++ +++f nK D+
  EPX72520.1  45 TIPTIGFNVETVEYR-NISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVD----------SNDRERISEAHEELQRMLNEDELRDALLLVFANKQDL 130
                 478999999999999.********************************97..........4445788888888888888888888888888888886 PP

>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.8   0.0   5.3e-16   1.2e-12       2     136 ..      20     153 ..      19     179 .. 0.77

  Alignments for each domain:
  == domain 1  score: 47.8 bits;  conditional E-value: 5.3e-16
                 EEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHHH CS
         Ras   2 lvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeikrv 100
                 +++vG  a GKt++l++   ++  ++ ++Tig++    +  v+ +++++++wD  Gq++ + l + y+++++gi+ v d ++re  +++++ ++ + + 
  EPX72520.1  20 ILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE--T--VEYRNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNE 113
                 899*******************9976.9***87655..4..456789******************************9999998888887555555555 PP

                 ST.TTSEEEEEEETTTGGG...G-SS-HHHHHHHHHHHTS CS
         Ras 101 ae.envpivLvGnKvDlee...kravsteegeelakelgl 136
                  e ++  +++ +nK Dl +     +++ + g +  ++ + 
  EPX72520.1 114 DElRDALLLVFANKQDLPNamnAAEITDKLGLHSLRHRQW 153
                 55678899999******98655556666666555555554 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.6   0.0   3.8e-14   8.6e-11       1     135 [.      19     142 ..      19     162 .. 0.88

  Alignments for each domain:
  == domain 1  score: 41.6 bits;  conditional E-value: 3.8e-14
   Gtr1_RagA   1 kvLLmGksgsGKtsmrsiiFdnylardtlrlgatidveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDvesre.leedletl 98 
                 ++L++G   +GKt++      ++   ++++   ti  + ++v  ++n+ + +wD+gGq+++          + f+n + +i+V+D+++re ++e++e+l
  EPX72520.1  19 RILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETV-EYRNISFTVWDVGGQDKIRPLW-----RHYFQNTQGIIFVVDSNDRErISEAHEEL 107
                 589**********85....5678889999999**********.599*************987664.....899***************9879999999* PP

   Gtr1_RagA  99 keilealrqyspeakvfvlihKmDliqedereeifee 135
                 +++l++  +  ++a + v+ +K Dl + ++ +ei ++
  EPX72520.1 108 QRMLNE--DELRDALLLVFANKQDLPNAMNAAEITDK 142
                 999985..6779999*********9998888887765 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.3   0.0   2.7e-09   6.1e-06       1     111 [.      19     123 ..      19     127 .. 0.74

  Alignments for each domain:
  == domain 1  score: 26.3 bits;  conditional E-value: 2.7e-09
                 EEEEEESTTSSHHHHHHHH.HTSTEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHH.HHHHHHHHHHCTSEEEEEEETT.TTCSHHHHHH CS
    MMR_HSR1   1 evaivGrpNvGKStLinal.tgekaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseek.glgkaflaleeadlillvvdas.eeklkpldee 96 
                 +++ vG   +GK+t++ +l +g   iv+ +p  T+  n ++v++++ +++++D+ G  +    +   l +++ +  +++ i++vvd++ +e +++  ee
  EPX72520.1  19 RILMVGLDAAGKTTILYKLkLG--EIVTTIP--TIGFNVETVEYRNISFTVWDVGG-QD----KIrPLWRHYFQ--NTQGIIFVVDSNdRERISEAHEE 106
                 5889***************444..5777777..77777777777799*********.43....22357777775..578*******7775679999999 PP

                 HHHHHHH..TTSEEEEE CS
    MMR_HSR1  97 leellee..akkplilv 111
                 l+++l+e   ++ l+lv
  EPX72520.1 107 LQRMLNEdeLRDALLLV 123
                 99999876422233333 PP

>> 6PF2K  6-phosphofructo-2-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   5.9e-06     0.013      10      51 ..      14      55 ..       6      73 .. 0.83
   2 ?   -2.8   0.0       1.4   3.1e+03      90     109 ..      80      99 ..      77     130 .. 0.59

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 5.9e-06
                ..S-EEEEEESSTTSSHHHHHHHHHHHHHHTT--EEEEEHHH CS
       6PF2K 10 knsklvivlvGLpargKtyiskkltrylkwlgvrtkvFnvgk 51
                 ++++ i++vGL a gKt+i  kl      ++++t  Fnv  
  EPX72520.1 14 GKREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVET 55
                567889****************99877778888888888864 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.4
                 HHHHTS--SEEEEES---SH CS
       6PF2K  90 aylneeegqvaifDAtNttr 109
                 +y+++ +g + + D     r
  EPX72520.1  80 HYFQNTQGIIFVVDSNDRER 99 
                 56666666666665544333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       657  (0.0366445); expected 358.6 (0.02)
Passed bias filter:                      564  (0.0314574); expected 358.6 (0.02)
Passed Vit filter:                        72  (0.00401584); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.48u 0.28s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 1235.25
//
Query:       EPX72521.1  [L=447]
Description: X-Pro dipeptidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      8e-48  162.9   0.0    1.1e-47  162.5   0.0    1.2  1  Peptidase_M24  Metallopeptidase family M24
    0.00011   22.9   0.0    0.00016   22.3   0.0    1.3  1  Creatinase_N   Creatinase/Prolidase N-terminal domain


Domain annotation for each model (and alignments):
>> Peptidase_M24  Metallopeptidase family M24
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  162.5   0.0   1.2e-51   1.1e-47       6     208 ..     229     430 ..     224     431 .. 0.91

  Alignments for each domain:
  == domain 1  score: 162.5 bits;  conditional E-value: 1.2e-51
                    HHHHHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHHHTTTCEESSSSEEEEGGGGGSTTTBCSSSB--TTEEEEEEEEEEETTEEEEEEEEEECS.. CS
  Peptidase_M24   6 aariasaaleavleaikpgvterelaaeieattlkrhgarglafppivasgenaavlhytpndrvlkegdlvlidagaeydgyasDitrTvlvG.. 99 
                    ++ ++  +++ +  ++kpg+te  la+ i++  + ++g   +  +piv +ge+aa++h+ p++r+l+++++ lid+g e+ gy+sD+trTv+    
     EPX72521.1 229 VNIATISVIRSIQPCLKPGITELHLAETINKL-FVYGGLPPQD-SPIVLFGERAAMPHGMPSERTLNKNEFALIDIGTELLGYHSDCTRTVIPNdq 322
                    566666788889889***************87.9999988887.67*********************************************87657 PP

                    SGSHHHHHHHHHHHHHHHHHHHC-ST..TSBHHHHHHHHHHHHHHTTBCCGBSSCSEEEESSSSSEEEEEESSSTTCSSB--TTBEEEEEEEEEEE CS
  Peptidase_M24 100 kftpeqrelyeavleaqeaaikavkp..GvtlseidaaarevlesaglakffphglGHgvGlevhdegpsvsresndgrkleeGmvftiEpgiyfa 193
                    k t+e+++++++v eaq a+i+a+     ++++ +d++ar+v+++ag++++f h+lGHg+Gle h++  ++++ +n+++ +++G++ft+Epgiy +
     EPX72521.1 323 KMTKEMERIWNTVFEAQTAGINALGNsnHTSCASVDRIARNVIREAGYGDYFIHRLGHGLGLEEHES-TYLNS-ANNNTYIQKGNIFTVEPGIY-I 415
                    88889*******************8534778**********************************98.99986.778*****************.9 PP

                    TTTEEEEEBEEEEEE CS
  Peptidase_M24 194 pgeggvriedtvlvt 208
                    p++ gvried +lv 
     EPX72521.1 416 PNKIGVRIEDAILVS 430
                    9999*********96 PP

>> Creatinase_N  Creatinase/Prolidase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   1.8e-08   0.00016       1     132 []      80     217 ..      80     217 .. 0.86

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 1.8e-08
                   HHHHHHHHHHHTT-SEEEEECCHHHHHHHSS......-SSSEEEEEEESSCEE......EEEECTTHHHHHHHH...TTSEEEEESTHSSHHHHHHH CS
  Creatinase_N   1 RlerlralmeekgldallvtspenlrYltGfa...tetgsrglalvvtadgal......llvdalryteaaees..atveevveyddpvealadllk 86 
                   R++rl+  +  +++da++  +  +++Y  +     +   +r+++ +v ad+++      +l+++++  +a+e    +   + +++d+ +e+ +++l 
    EPX72521.1  80 RRKRLASTLVSENVDAFVMEPTISMNYYANISsnaWSLSERPFLGIVFADDKSsettvfFLLPKFELPRAKELVgnKLTAKYITWDE-DENPYQVLY 175
                   99*****************************9999999999999999777774488888***************99899999*****.777777777 PP

                   HHHHHT-EEEE-TTSSBHHHHHHHHHHCTTSEEEETHHHHHHHHSC CS
  Creatinase_N  87 ellesekrvgveldaltvafyealkealpdaelvdaselieelRvv 132
                   + l   +++ ++ + + +  ++ l+e     e+v  s+ +  lR+v
    EPX72521.1 176 DILGP-SKLMIDGT-VRNFIAQGLQENGF--EVVGQSQNVSSLREV 217
                   77544.78999999.68888999988754..888888888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (447 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       414  (0.0230911); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 3109.37
//
Query:       EPX72522.1  [L=458]
Description: seven transmembrane receptor-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.1e-48  165.1  19.8    2.1e-48  165.1  19.8    1.4  2  Lung_7-TM_R  Lung seven transmembrane receptor


Domain annotation for each model (and alignments):
>> Lung_7-TM_R  Lung seven transmembrane receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.1      0.26   4.7e+03     237     264 ..       7      34 ..       6      36 .. 0.70
   2 !  165.1  19.8   1.1e-52   2.1e-48       1     294 [.     139     427 ..     139     428 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 0.26
  Lung_7-TM_R 237 isvvasviivlvekillktvdsvekqWk 264
                  + v + ++++++++i+l +   ++++++
   EPX72522.1   7 CFVSLAFLWSYLASITLAEKTLLNSKFQ 34 
                  5666778888888888877777777776 PP

  == domain 2  score: 165.1 bits;  conditional E-value: 1.1e-52
  Lung_7-TM_R   1 ikktGlYclifskcdeklsksksslklkvkvnwknpegyLsaseapllklylimalayvllgilWlfilakykkdilkiqkliaavivlkmlelafvy 98 
                  i+ +G+Yc++++++        ++  +++ vnw+n++g+L+as++p+l+l++ +++ay+++ +lW+f+ ++yk++i++ q+++++v+v++++ +a+++
   EPX72522.1 139 ISHSGYYCIWTHSL--------KDKPYQALVNWQNAYGNLPASQYPRLPLSGGITIAYSAILALWMFFRFQYKNSIVPAQRVLLFVFVFSCITQALTS 228
                  5789******9955........56689*********************************************************************** PP

  Lung_7-TM_R  99 ieYatinskGss..ievlavlasilsalkktlsrlliliislGygivkpkLgdllkkvlllglllfvlaevlelvresseesessakllkvllflipl 194
                  i ++t n + ++  ++  ++++s++++l k ++++l+l+ s+Gy+ ++pk+ ++l+k   l l++++l+  l+ v++++++++s +  l+  +fli +
   EPX72522.1 229 IILDTKNLRDRTsfTWISEFIISVIFSLEKLFDFILLLVFSWGYTSYSPKITERLMKQHSLPLIFLFLS--LFSVKFFGISIQSIHLGLWYGVFLIIA 324
                  ***********9999999***************************************************..788*************99999999999 PP

  Lung_7-TM_R 195 alldlffvvwifrsLqktlrdlklkrnlvklklYrkftvvlvisvvasviivlvekill...ktvdsvekqWkeeWlitafw.elltlvllvviaylw 288
                  +   l++++ ++     tl++  +k  +  ++ ++ +++   i +++ +++ lv+ ++l   ++ +s +k Wk +W++ + w + l+l+ l ++a+lw
   EPX72522.1 325 VSSSLVLLYQALLYFPTTLQAMIEKEFVLLHNNFKVLRISATITMILNAAFGLVA-FALcfkTNHSSSSKIWKFRWFFMDGWmDALHLICLSLLAFLW 421
                  99999**********************************9999999999998888.44447788889999**************************** PP

  Lung_7-TM_R 289 rPsqnn 294
                  rPs +n
   EPX72522.1 422 RPSPKN 427
                  ***998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (458 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       755  (0.0421105); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 3234.50
//
Query:       EPX72523.1  [L=878]
Description: DNA helicase I [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-13   51.3   2.3      7e-09   35.6   2.3    2.4  1  UvrD-helicase    UvrD/REP helicase N-terminal domain
    1.7e-13   50.7   0.0      4e-13   49.5   0.0    1.7  1  UvrD_C           UvrD-like helicase C-terminal domain
    1.9e-13   51.0   0.0    3.6e-13   50.1   0.0    1.5  1  AAA_19           AAA domain
    2.9e-08   33.8   0.1      0.039   13.7   0.0    3.5  3  Viral_helicase1  Viral (Superfamily 1) RNA helicase
    6.2e-08   32.3   0.0    4.2e-07   29.7   0.0    2.3  1  UvrD_C_2         UvrD-like helicase C-terminal domain
    0.00015   21.6   0.0      0.019   14.7   0.0    2.2  2  AAA_30           AAA domain
  ------ inclusion threshold ------
      0.033   13.6   0.0       0.69    9.3   0.0    2.3  2  PhoH             PhoH-like protein


Domain annotation for each model (and alignments):
>> UvrD-helicase  UvrD/REP helicase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.6   2.3   2.7e-12     7e-09     251     307 ..     473     527 ..     273     531 .. 0.73

  Alignments for each domain:
  == domain 1  score: 35.6 bits;  conditional E-value: 2.7e-12
                    HHHHHHSSEEEESSGGG-BHHHHHHHHHHHTTTTT.EEEEE-GGG--GGGGTB-THHH CS
  UvrD-helicase 251 ealrerykeiliDEyQDTnkiQyrilkllasghee.lfmvGDpkQsIYgFRgAdielf 307
                     ++ ++y++il DE+QD  ++       ++++++  +++vGD  Q+IYgFRgAd   f
     EPX72523.1 473 PNIFSKYDYILFDEAQDFTRCMV---DVIYRQKHArIVIVGDAHQCIYGFRGADACAF 527
                    467789***********999855...5555555445******************8766 PP

>> UvrD_C  UvrD-like helicase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.5   0.0   1.6e-16     4e-13     134     344 ..     420     773 ..     310     776 .. 0.59

  Alignments for each domain:
  == domain 1  score: 49.5 bits;  conditional E-value: 1.6e-16
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........................................... RF
      UvrD_C 134 rilkrlvlgigkatveriseelkklglsltDfikedtleygeeFieliraleeknl........................................... 189
                 r+l++ +l++++ + e++++ ++kl   + +f  +      + +++l+  +e  n+                                           
  EPX72523.1 420 RHLSKRTLEVTQLSKEKLLSYVRKLWALIINFDCSYAPLIPDAYMKLLHLYEFPNIfskydyilfdeaqdftrcmvdviyrqkharivivgdahqciyg 518
                 455555555555555555444444444444444444444445555555555555556666666666666666666666666666666666666666666 PP

                 .................................................................................xxxxxxxxxxxxxxxxxx RF
      UvrD_C 190 .................................................................................elllkkiektaeerqalv 207
                                                                                                  +                 
  EPX72523.1 519 frgadacafdetlypstkqlyltksfrfgnsvakyanfilslkgenvklrgvqddrvfrsvnepfsvinehfrfiphtmifR----------------- 600
                 6666655555555555555555555555555555554444444443333333333333333333333333333333222220................. PP

                 xxxxxxxxxxxxxxxxxxxxxxxxx..........................................xxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      UvrD_C 208 skyadlfkelaeklaelkekseskr..........................................kkee.klenlreLysllkelekkeeeeeveek 263
                                                                                    + ++    +lre++s+++ +e  + +++ ee+
  EPX72523.1 601 ------------------------TnkelilqsirlsvslpknipitilgsmkkkafqllrsgselaQGQRpSHPKLREFSSWAE-FET-HVKNSAEED 673
                 ........................1222222233333333333333333333333333333333333333345566777776654.222.122222222 PP

                 .........xxxxxxxx...xxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxx RF
      UvrD_C 264 .........lneileia...tLseseleeskkk....ekipiiTiHqAKGlEFdvVflagleegtfPsyrskk......ekrleEEkRlfYVaiTRAkk 340
                           +e+ +++    L + e++  ++k    + i + T Hq+KGlE+d+V l +   +  P++ s++      ++ l+EE +++YVa+TRAk 
  EPX72523.1 674 pelalvydmAEELFSETfltRLDNCEQRLIQSKdegeNGIILATAHQSKGLEWDNVQLGN---DFRPKFDSTSyarigfSRYLKEEINILYVALTRAKH 769
                 344466666333333333333333333333333337789*****************9988...7778887777888***99****************** PP

                 xxxx RF
      UvrD_C 341 rLfi 344
                  L++
  EPX72523.1 770 CLIL 773
                 9987 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.1   0.0   1.4e-16   3.6e-13       1     146 []     277     520 ..     277     520 .. 0.86

  Alignments for each domain:
  == domain 1  score: 50.1 bits;  conditional E-value: 1.4e-16
      AAA_19   1 qreave..alkekvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAakelrerlaalgaeatTiHrlal.................... 77 
                 q+++ve   ++ +vl v a +GtGKT+ l +  +    ++  + ++il vaf++ A +e ++r   l+++ +T+H+la                     
  EPX72523.1 277 QKRIVEceLHPGEVLKVKAFAGTGKTKALLEFSR----NR--PNNKILYVAFNKAAKEEAEQRF-PLNVKCSTMHGLAYgailaqadlpasklerqlsn 368
                 77888554678899************98876543....33..4578******999999999998.9***********99******************** PP

      AAA_19  78 ....................................................................................ldfddlltealelle 92 
                                                                                                       + +l+  + ++++
  EPX72523.1 369 snianllslqaafpksnrkaspgtpsatlvashimftlnrfmhstdshlsfrhlskrtlevtqlskekllsyvrklwaliinfdCSYAPLI--PDAYMK 465
                 ***********************************************************99999999999999999999988884455555..233333 PP

      AAA_19  93 ...eaeeekklqeee.llivDEfqdvdelqyrLlkallgekkklllvGDpdQliyvfr 146
                      e  + + +++ +++ DE+qd +  ++ ++ + +  ++++++vGD++Q iy fr
  EPX72523.1 466 llhLYEFPNIF-SKYdYILFDEAQDFTRCMVDVIYRQK--HARIVIVGDAHQCIYGFR 520
                 44444667777.5555***********99999998877..566************996 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.0    0.0011       2.9       3      25 ..     293     320 ..     291     348 .. 0.66
   2 !   13.7   0.0   1.5e-05     0.039      60     102 ..     477     517 ..     459     553 .. 0.88
   3 !    8.2   0.0    0.0007       1.8     185     231 ..     715     772 ..     656     774 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0011
  Viral_helicase1   3 vhGvpGcGKStlirkllrts.....lil 25 
                      v++++G GK++++ ++ r++     l +
       EPX72523.1 293 VKAFAGTGKTKALLEFSRNRpnnkiLYV 320
                      899**************99554432222 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 1.5e-05
  Viral_helicase1  60 stkgkililDEylllhaGyilllaalskaklvilfGDplQipf 102
                      s k++++++DE++  ++++++++ ++ +a  ++++GD  Q+ +
       EPX72523.1 477 S-KYDYILFDEAQDFTRCMVDVIYRQKHA-RIVIVGDAHQCIY 517
                      3.699***********************9.58889*****876 PP

  == domain 3  score: 8.2 bits;  conditional E-value: 0.0007
  Viral_helicase1 185 vttvhevqGltfdkVtlvllketdlelis...........esrenllvAlTRhrkslv 231
                        t h+  Gl++d+V+l  + +++ +  s           e+ + l+vAlTR++ +l+
       EPX72523.1 715 LATAHQSKGLEWDNVQLGNDFRPKFDSTSyarigfsrylkEEINILYVALTRAKHCLI 772
                      5699999**********9888888777668899999999977899*********9986 PP

>> UvrD_C_2  UvrD-like helicase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   0.0   1.6e-10   4.2e-07       6      51 ..     717     773 ..     713     773 .. 0.87

  Alignments for each domain:
  == domain 1  score: 29.7 bits;  conditional E-value: 1.6e-10
    UvrD_C_2   6 tihkaQGsefpaVivfdpdlaaarmgel............rrrlLYtavTRAreklil 51 
                 t h+++G+e+++V++   d+     ++               ++LY+a+TRA++ lil
  EPX72523.1 717 TAHQSKGLEWDNVQL-GNDFRPKFDSTSyarigfsrylkeEINILYVALTRAKHCLIL 773
                 88*************.666666665656899***********************9987 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   7.2e-06     0.019       2      77 ..     273     347 ..     272     370 .. 0.81
   2 !    4.6   0.0    0.0094        24     113     128 ..     500     515 ..     462     576 .. 0.66

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 7.2e-06
      AAA_30   2 lnaeQaaavealltsgdrvavltGpAGtGKttalkalreaweaaggrviglAptgkaAkvLae..elgieastiakll 77 
                 l+aeQ+++ve  l+ g+ v  +++ AGtGKt al +  +     + +++ +A +++a ++ ++   l++++st++ l 
  EPX72523.1 273 LTAEQKRIVECELHPGE-VLKVKAFAGTGKTKALLEFSRNRP--NNKILYVAFNKAAKEEAEQrfPLNVKCSTMHGLA 347
                 789******99999997.999**********98877766544..5679999999999999887224557999998876 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.0094
      AAA_30 113 ekagakvilvGDerQl 128
                 ++++a++++vGD +Q 
  EPX72523.1 500 RQKHARIVIVGDAHQC 515
                 45679**********6 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0      0.07   1.8e+02       5      33 ..     273     302 ..     271     310 .. 0.85
   2 ?    9.3   0.0   0.00027      0.69     122     158 ..     481     515 ..     478     526 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.07
                 -SHHHHHHHHH.HHH-SEEEEE--TTSSTT CS
        PhoH   5 ktkeQkeylea.lkkndivfaiGpaGtGKt 33 
                  t+eQk+++e  l+  +++ + + aGtGKt
  EPX72523.1 273 LTAEQKRIVECeLHPGEVLKVKAFAGTGKT 302
                 68899999986367899999*********9 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00027
                 EEEE-SGGG--HHHHHHHHTTB-TT-EEEEEE----- CS
        PhoH 122 fvilDEAQnttkeqmkmfltRlGenskvvvtGdvtqi 158
                 ++++DEAQ++t+  m  ++ R  +++++v++Gd +q+
  EPX72523.1 481 YILFDEAQDFTRC-MVDVIYR-QKHARIVIVGDAHQC 515
                 89********986.6667777.589*********996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (878 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       343  (0.019131); expected 358.6 (0.02)
Passed bias filter:                      292  (0.0162865); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.68u 0.25s 00:00:00.93 Elapsed: 00:00:00.45
# Mc/sec: 5805.10
//
Query:       EPX72524.1  [L=307]
Description: 18S rRNA dimethylase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-65  220.8   0.0      2e-65  220.5   0.0    1.1  1  RrnaAD           Ribosomal RNA adenine dimethylase
    1.6e-07   31.9   0.0    3.6e-07   30.8   0.0    1.6  1  Methyltransf_25  Methyltransferase domain
    1.7e-05   25.4   0.0    3.5e-05   24.4   0.0    1.5  1  Methyltransf_11  Methyltransferase domain
    3.9e-05   23.5   0.0    5.9e-05   22.9   0.0    1.2  1  PCMT             Protein-L-isoaspartate(D-aspartate) O-methyl
    0.00044   19.6   0.0    0.00072   18.9   0.0    1.2  1  CMAS             Mycolic acid cyclopropane synthetase
    0.00083   19.2   0.0     0.0019   18.0   0.0    1.6  2  Methyltransf_31  Methyltransferase domain
     0.0012   18.5   0.0     0.0021   17.7   0.0    1.4  1  MTS              Methyltransferase small domain
     0.0014   18.5   0.1     0.0021   17.9   0.1    1.3  1  Met_10           Met-10+ like-protein
     0.0022   17.8   0.0      0.004   17.0   0.0    1.5  1  Methyltransf_23  Methyltransferase domain
     0.0024   18.6   0.0     0.0056   17.4   0.0    1.6  1  Methyltransf_12  Methyltransferase domain
     0.0038   17.1   0.2      0.009   15.9   0.0    1.6  2  PRMT5            PRMT5 arginine-N-methyltransferase
     0.0054   15.9   0.0     0.0097   15.0   0.0    1.4  1  DREV             DREV methyltransferase
  ------ inclusion threshold ------
      0.013   15.4   0.0      0.023   14.6   0.0    1.4  1  Methyltransf_18  Methyltransferase domain
      0.035   14.1   0.0      0.059   13.4   0.0    1.3  1  Methyltransf_32  Methyltransferase domain
      0.044   13.4   0.0      0.076   12.6   0.0    1.4  1  Methyltransf_28  Putative S-adenosyl-L-methionine-dependent m
      0.061   12.7   0.0      0.087   12.1   0.0    1.2  1  Ubie_methyltran  ubiE/COQ5 methyltransferase family
      0.082   12.3   0.0       0.12   11.7   0.0    1.2  1  PrmA             Ribosomal protein L11 methyltransferase (Prm
       0.11   12.1   0.0       0.19   11.4   0.0    1.4  1  Cons_hypoth95    Conserved hypothetical protein 95
       0.11   12.2   0.0       0.29   10.9   0.0    1.6  1  AAA_lid_4        RuvB AAA lid domain
       0.11   11.9   0.0       0.18   11.2   0.0    1.3  1  Methyltransf_4   Putative methyltransferase
       0.14   11.3   0.3       0.73    9.0   0.1    1.9  2  Methyltransf_3   O-methyltransferase
       0.15   11.4   0.0       0.24   10.6   0.0    1.3  1  Methyltransf_2   O-methyltransferase domain


Domain annotation for each model (and alignments):
>> RrnaAD  Ribosomal RNA adenine dimethylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  220.5   0.0   2.4e-68     2e-65       2     227 ..      22     238 ..      21     280 .. 0.92

  Alignments for each domain:
  == domain 1  score: 220.5 bits;  conditional E-value: 2.4e-68
                 GCCXXGCG--EE--HHHHHHHHHHH-GGTTSEEEEES-TTTCCHHHHHCC-SEEEEE-S-HHHHHHHHCHTT...TCCCEEEE-S-CCGHHHHHHHCTT CS
      RrnaAD   2 nklrksygqnflknkkvineIldklnleekltvleigpGkGilTeeLakrakqvvvlElderLakllqkkls...kdeklkvvhqDflkfetpeevtek 97 
                 +k++k++gq++lkn+ v+++I+dk+++++++tvle+gpG+G+lT+++++ ak+v ++E+d+r+a++l+k+++    ++kl+v+  D+ k+++p++    
  EPX72524.1  22 FKFNKDFGQHILKNPLVAQGIVDKADIKQSDTVLEVGPGTGNLTVRMLEKAKKVIAVEMDPRMAAELTKRVQgtpYEKKLQVILGDVVKTDLPYFD--- 117
                 79**********************************************************************99999*****************77... PP

                 TCCCCEEEEEEE--TTTHHHHHHHHHHGGGGCEEEEEEEEEHHHHHHHH--TTSTT-SHHHHHHHHHEEEEEEEEC-GGCECS--SSSEEEEEEEE-SS CS
      RrnaAD  98 dsihqeflvvanlPyeistqlvkqlleesrfglvkmllwlqkefarrllarpgskkrsrlsvlreaftdvklvakveksifsPppkvdsalvelerkde 196
                         +v+n+Py+is++lv+++l+++ +  + ++l++q+efa rl+arpg+ +++rls ++++++ vk+++kv+k++f+Ppp v+s++v++e+k +
  EPX72524.1 118 -------VCVSNTPYQISSPLVFKILQQKPA-PRSSILMFQREFALRLIARPGDALYCRLSANVQMWAHVKHIMKVGKNNFRPPPLVESSVVRIEPKSP 208
                 .......7******************85555.699**************************************************************** PP

                 -S--S-HHHHHHHHHHHHCTTTSBCCCHCCC CS
      RrnaAD 197 dlpqkdlkkyesvvrkllnrkrktlstslks 227
                   p  + ++++ ++r+++ rk+kt+ + +ks
  EPX72524.1 209 A-PPISFEEWDGLLRIIFMRKNKTVGACFKS 238
                 8.89*********************988775 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   0.0   4.5e-10   3.6e-07       1      73 [.      54     123 ..      54     138 .. 0.86

  Alignments for each domain:
  == domain 1  score: 30.8 bits;  conditional E-value: 4.5e-10
                      EEEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTT..TEEEEESBCCGBSSSTTTEEEEEEEST CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeegl..nvefvqgdaedlpfedgsfDlvvssga 73 
                      vL++G GtG+lt +++++   +kv++v+++++m ++  +r++   +  +++++ gd+ + +++   fD++vs+ +
       EPX72524.1  54 VLEVGPGTGNLTVRMLEKA--KKVIAVEMDPRMAAELTKRVQGTPYekKLQVILGDVVKTDLPY--FDVCVSN-T 123
                      9****************96..9*******************8755588*********8888886..9999995.4 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.0   4.3e-08   3.5e-05       1      68 [.      55     122 ..      55     135 .. 0.93

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 4.3e-08
                      EEET-TTSHHHHHHHHTTSEEEEEES-HHHHHHHHHHCCHHT-..EEEETTEECCCTSS-TT-EEEEEEE CS
  Methyltransf_11   1 LdvGcGtGrlaealakrgarvvgvDlskemlklakekaseegl..kvefvvadaeklpfednsfDlvvss 68 
                      L+vG GtG l+  + +++++v++v+++++m +   +++++ +   k++++ +d+ k+ ++   fD++vs+
       EPX72524.1  55 LEVGPGTGNLTVRMLEKAKKVIAVEMDPRMAAELTKRVQGTPYekKLQVILGDVVKTDLPY--FDVCVSN 122
                      89*****************************9999999999889*9*********988886..9999997 PP

>> PCMT  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.0   7.2e-08   5.9e-05      61     155 ..      38     127 ..      19     137 .. 0.80

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 7.2e-08
                 HHHHHHHHTT--TT-EEEEES-TTSHHHHHHHHHHCTTCEEEEEESBHHHHHHHHHHHHHCTTC.SEEEEES-GGGTTGGG-SEEEEEESSBBSS- CS
        PCMT  61 mvalalellelkkgarvLevGsGsGyltavlarlvgekgrvvsierikelveeakrnlkkldle.nvivvvgDGrkGyeekaPYdaihvgaaapei 155
                 +   +++  ++k+ + vLevG G+G lt+   r++++  +v+++e  +++++e +++++   +e +++v+ gD     +   PY  + v+ ++ +i
  EPX72524.1  38 VAQGIVDKADIKQSDTVLEVGPGTGNLTV---RMLEKAKKVIAVEMDPRMAAELTKRVQGTPYEkKLQVILGDVV---KTDLPYFDVCVSNTPYQI 127
                 44456677789**************9986...88899999*******************9998879******964...455666666666655555 PP

>> CMAS  Mycolic acid cyclopropane synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   8.8e-07   0.00072      54     126 ..      42     113 ..      38     123 .. 0.89

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 8.8e-07
                 HHTTTT--TT-EEEEES-TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHTS-SSS-EEEEES-GGG--- CS
        CMAS  54 ileklelkpGmtlLdiGcGWGslvrraverydvkvvglTlSkeqaklakkrvdeldlerkvevklldyedlde 126
                 i++k+++k+ +t+L++G G G+l++r+ e+   kv+++ +    a+   krv+ +  e+k +v l d    d 
  EPX72524.1  42 IVDKADIKQSDTVLEVGPGTGNLTVRMLEK-AKKVIAVEMDPRMAAELTKRVQGTPYEKKLQVILGDVVKTDL 113
                 789***************************.99***************************9999988776665 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   2.4e-06    0.0019       2      84 ..      49     125 ..      48     194 .. 0.78
   2 ?   -2.3   0.0       4.2   3.4e+03      71      88 ..     261     278 ..     229     286 .. 0.66

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 2.4e-06
  Methyltransf_31   2 dkglrvlDlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaqklgld.nveFeqgdieeleklledekfDlilsnevl 84 
                      ++  +vl++G GtG+lt ++ e+    ++v+ +++++++    +++ q   ++  +++  gd+ + +  l    fD+ +sn + 
       EPX72524.1  49 KQSDTVLEVGPGTGNLTVRMLEK---AKKVIAVEMDPRMAAELTKRVQGTPYEkKLQVILGDVVKTD--LP--YFDVCVSNTPY 125
                      56789****************66...467************************9*********9977..45..5***9999554 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 4.2
  Methyltransf_31  71 edekfDl.ilsnevlnala 88 
                      e ++fD+ +l ++vl  ++
       EPX72524.1 261 E-DNFDVkVLIDQVLTSIN 278
                      2.67888777777775544 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   2.5e-06    0.0021      17     110 ..      27     128 ..       7     139 .. 0.71

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 2.5e-06
                 -HHHHHHHHHCHCC.........TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBH.HHHHHHHHHHHHTTGC..EEEEE-STTTTSTTS-EEEEEE CS
         MTS  17 DkGsklLletlpke.........lsgkvlDlGcGaGvlgaalakespeaevtlvdvda.rAlesakenleankle..vevvasdvleeveekkfdlivs 103
                 D G ++L + l ++         +s++vl +G G+G l++ ++++ ++  v +v+ d  +A e++k+   +   e  ++v+  dv+++     fd+ vs
  EPX72524.1  27 DFGQHILKNPLVAQgivdkadikQSDTVLEVGPGTGNLTVRMLEKAKK--VIAVEMDPrMAAELTKRVQGTP-YEkkLQVILGDVVKTDL-PYFDVCVS 121
                 555555555555544444455557788*****************9999..5555555414555555544333.3336********99888.8******* PP

                 ---STTT CS
         MTS 104 NPPfhag 110
                 N P++ +
  EPX72524.1 122 NTPYQIS 128
                 ***9765 PP

>> Met_10  Met-10+ like-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.1   2.6e-06    0.0021      98     163 ..      48     111 ..      14     138 .. 0.88

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 2.6e-06
                 --TT-EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG- CS
      Met_10  98 veegevVvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkvekvvkpileDgrev 163
                 +++ ++V++v  G G +++ +    kak+v+a++++P+    l++ ++    ek++++il+D+ + 
  EPX72524.1  48 IKQSDTVLEVGPGTGNLTVRMLE--KAKKVIAVEMDPRMAAELTKRVQGTPYEKKLQVILGDVVKT 111
                 68899**************9998..*************************************8765 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   4.9e-06     0.004      21      61 ..      49      89 ..      13     154 .. 0.80

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 4.9e-06
  Methyltransf_23 21 raggrvLdiGcGtGillevlrengfsvtgvDlspeaveiae 61
                     +++  vL++G+GtG+l+  + e+ ++v++v+++p++ +++ 
       EPX72524.1 49 KQSDTVLEVGPGTGNLTVRMLEKAKKVIAVEMDPRMAAELT 89
                     66779*****************************9998764 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   6.8e-06    0.0056       1      73 [.      55     122 ..      55     137 .. 0.85

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 6.8e-06
  Methyltransf_12   1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvelealdlldldggssfDlvvas 73 
                      Le+G GtG+l+ ++lek   +++++v+ +p++ +   ++ +    ++  ++++   d+ ++d + +fD+ v++
       EPX72524.1  55 LEVGPGTGNLTVRMLEK--AKKVIAVEMDPRMAAELTKRVQGTPYEK--KLQVILGDVVKTDLP-YFDVCVSN 122
                      8****************..**************88888888877766..666666677777777.99998765 PP

>> PRMT5  PRMT5 arginine-N-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   1.1e-05     0.009      61     143 ..      47     121 ..      18     123 .. 0.79
   2 ?   -2.8   0.0       5.9   4.8e+03      99     139 ..     245     267 ..     236     278 .. 0.46

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 1.1e-05
                 CC.-EEEEEEES-TTSHHHHHHHHHHHHHCCCEEEEEEEES-HHHHHHHHHHHHHHTTCCGCEEEES-CCCCCHCC-ECEEEE CS
       PRMT5  61 ksekklvilvvGaGRGplvdralkaleetkvtkvkivavEKnpnavvtLqkkvneekWeekveviksdmrelkaeekvdllvs 143
                 + +++ ++l vG G G l  r+l+   ++k    k++avE  p+    L+k+v+ + +e+k++vi  d+ + + +  +d++vs
  EPX72524.1  47 DIKQSDTVLEVGPGTGNLTVRMLE---KAK----KVIAVEMDPRMAAELTKRVQGTPYEKKLQVILGDVVKTDLPY-FDVCVS 121
                 33455678999*****99776664...555....799********************************9988875.899988 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 5.9
                 EES-HHHHHHHHHHHHHHTTCCGCEEEES-CCCCCHCC-EC CS
       PRMT5  99 vEKnpnavvtLqkkvneekWeekveviksdmrelkaeekvd 139
                 +E+n ++ +  ++++ e+++                   v 
  EPX72524.1 245 IERNYRTWCSQNERMIEDNF------------------DVK 267
                 33333333333333333333..................333 PP

>> DREV  DREV methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   1.2e-05    0.0097      83     135 ..      38      91 ..      17     111 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 1.2e-05
        DREV  83 aiekespasd.qedkklldlGaGdGeitkrvaptfeevyatelsetmrdrlkkk 135
                 ++++   ++d +++ ++l++G G G++t r+ +  ++v a e+  +m   l k+
  EPX72524.1  38 VAQGIVDKADiKQSDTVLEVGPGTGNLTVRMLEKAKKVIAVEMDPRMAAELTKR 91 
                 4555444444156789********************************999886 PP

>> Methyltransf_18  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   2.9e-05     0.023      12      77 ..      48     111 ..      43     145 .. 0.91

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 2.9e-05
  Methyltransf_18  12 vekgsrvaDiGtDHgylpiylvkegkakkviasDinegplekakeniekagledkievrlsdGlek 77 
                      ++++++v+ +G   g l++ ++  +kakkvia+++ +   ++  + ++ + +e+k++v+l+d +++
       EPX72524.1  48 IKQSDTVLEVGPGTGNLTVRML--EKAKKVIAVEMDPRMAAELTKRVQGTPYEKKLQVILGDVVKT 111
                      788999****************..57899*********************************9875 PP

>> Methyltransf_32  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   7.2e-05     0.059      18      93 ..      44     112 ..      34     148 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 7.2e-05
  Methyltransf_32  18 kelakesgaltvvDvGaGkgYLsfvlalkekeyklkvvgidakeelvekaekraeklgkkfnkrlsfaelsieeat 93 
                      ++ a+ +++ tv++vG G g L+ ++      +  kv+++++  +++++  kr +     ++k+l+ + +++ +++
       EPX72524.1  44 DK-ADIKQSDTVLEVGPGTGNLTVRMLE----KAKKVIAVEMDPRMAAELTKRVQGTP--YEKKLQVILGDVVKTD 112
                      33.577899*****************99....4789***********99999999888..8888887777766655 PP

>> Methyltransf_28  Putative S-adenosyl-L-methionine-dependent methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   9.4e-05     0.076      21      74 ..      53      96 ..      29     123 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 9.4e-05
  Methyltransf_28 21 rliElGpGkGtLmadvLrtlrkflpefyealeyhlvEaSpqlrerQknrLkeka 74
                     +++E+GpG+G L   +L+  +k           + vE+ p+++++  +r++++ 
       EPX72524.1 53 TVLEVGPGTGNLTVRMLEKAKKV----------IAVEMDPRMAAELTKRVQGTP 96
                     799**************988766..........778888888888888888864 PP

>> Ubie_methyltran  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00011     0.087      39      98 ..      42      98 ..       4     120 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00011
                     HHHH--S--TTEEEEES-TT-HHHHHHHHHHHHHHEEEEEES-HHHHHHHHHHHHHHTSS CS
  Ubie_methyltran 39 veklvavkrgakvlDvagGtgDlafklsdsvgekgkvvvlDinenmLkvgekklkeegki 98
                     + +    k++ +vl+v  Gtg+l+++++++++   kv+ +++++ m  +  k+++ + + 
       EPX72524.1 42 IVDKADIKQSDTVLEVGPGTGNLTVRMLEKAK---KVIAVEMDPRMAAELTKRVQGTPYE 98
                     44555667888**************9988765...7999999999999999999877665 PP

>> PrmA  Ribosomal protein L11 methyltransferase (PrmA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00015      0.12     159     233 ..      48     122 ..      41     138 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00015
        PrmA 159 vkegeevlDvGtGSGiLaiaaakLgakkvvavDiDevAvkvakeNaelNkveaklevalseellk..eekadvivaN 233
                 +k+ ++vl vG G+G L++  +   akkv+av +D+       + ++    e+kl+v+  ++++k     +dv v+N
  EPX72524.1  48 IKQSDTVLEVGPGTGNLTVRMLE-KAKKVIAVEMDPRMAAELTKRVQGTPYEKKLQVI-LGDVVKtdLPYFDVCVSN 122
                 68889*************97655.89*********96555455567888888899885.466665333457999998 PP

>> Cons_hypoth95  Conserved hypothetical protein 95
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00023      0.19      42     138 ..      51     138 ..      41     168 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00023
                    C-EEEETT-TTSHHHHHHHHTT-SEEEEEES-HHHHHHHHHHHCCCT--TTTEEEEES-HHHHCTS--SS-EEEEEEE--SSSTTCH.HHHHHHHH CS
  Cons_hypoth95  42 garvLDlfaGsGalglEAlSRgakkavlvekdkeavkilkenleelkleeetaelkedaleallklakkkeefdivflDPPyakellieevlelle 137
                      +vL++  G+G l +  l  +akk+++ve+d+++++ l + ++ +  e++ +++  d ++         ++fd+   + Py+ +     v++ l+
     EPX72524.1  51 SDTVLEVGPGTGNLTVRMLE-KAKKVIAVEMDPRMAAELTKRVQGTPYEKKLQVILGDVVKTD------LPYFDVCVSNTPYQISS--PLVFKILQ 137
                    45789999999999998886.67************************9999999999887654......34688888888888774..45555555 PP

                    H CS
  Cons_hypoth95 138 e 138
                    +
     EPX72524.1 138 Q 138
                    4 PP

>> AAA_lid_4  RuvB AAA lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00036      0.29       9      37 ..      68      96 ..      63      98 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00036
   AAA_lid_4  9 ivkrsakilgveieeegaaeiarRsRGTP 37
                +++++ k++ ve+++  aae+++R  GTP
  EPX72524.1 68 MLEKAKKVIAVEMDPRMAAELTKRVQGTP 96
                678999**********************9 PP

>> Methyltransf_4  Putative methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00022      0.18       3      60 ..      52     108 ..      50     117 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00022
                     EEEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHHHHHC.TTSSEEEEES-C CS
  Methyltransf_4   3 pvvleiGcGkGeflvalAkknPdknflGiEirvkvvakvlkkieal.elkNlrilrgda 60 
                      +vle+G G G+++v++ +k   k+++++E+  ++ a++ k+++     k l+++ gd 
      EPX72524.1  52 DTVLEVGPGTGNLTVRMLEK--AKKVIAVEMDPRMAAELTKRVQGTpYEKKLQVILGDV 108
                     579**************887..5889****************99873334566666665 PP

>> Methyltransf_3  O-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.53   4.3e+02     162     190 ..       2      29 ..       1      34 [. 0.71
   2 ?    9.0   0.1    0.0009      0.73      46     110 ..      49     110 ..      42     117 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.53
                     GGGG-SS--SHHHHH.....HHHHHHHHT CS
  Methyltransf_3 162 Gkvveeddeeakalreyravllelnkkla 190
                     Gkv +  +++a  ++e r+++ ++nk++ 
      EPX72524.1   2 GKVRARTNNAA-SQAEARNAVFKFNKDFG 29 
                     66766644444.44558*********875 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0009
                     HT--EEEEE--TTSHHHHHHHTTS-TT-EEEEEES-HHHHHHHHHHHHHTT-GGGEEEEES-HHH CS
  Methyltransf_3  46 vnakrvleiGvftGyslLatalalPeDGkilaididreayeialkfiqkagvaekieliegdalk 110
                      ++  vle+G  tG         l +  k++a+++d+  ++   k +q  ++++k+++i gd +k
      EPX72524.1  49 KQSDTVLEVGPGTGNLT---VRMLEKAKKVIAVEMDPRMAAELTKRVQGTPYEKKLQVILGDVVK 110
                     56677899998888643...45578889********987766667789*************9876 PP

>> Methyltransf_2  O-methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0    0.0003      0.24      47     131 ..      35     119 ..      10     129 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.0003
                     HHHHHHHHHHSS-GGG-SEEEEET-TTSHHHHHHHHH-TT-EEEEEE-HHHHHHHHHHS.-----TTEEEEES-TTTS-----SEE CS
  Methyltransf_2  47 sslvakkvleafdleglkslvDvGGGtGalakaivsayPtikvivfDlpeVveaAkehl.sageeervefvgGdffkdslPeaDai 131
                     + lva+ ++ + d+++  ++++vG GtG l   + ++  ++ ++ +D p+ +++  +++  ++ e++++++ Gd+ k  lP  D+ 
      EPX72524.1  35 NPLVAQGIVDKADIKQSDTVLEVGPGTGNLTVRMLEKAKKVIAVEMD-PRMAAELTKRVqGTPYEKKLQVILGDVVKTDLPYFDVC 119
                     4689999************************9999999999999999.5555555555548999*****************98875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (307 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       478  (0.0266607); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                        22  (0.00122706); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              22  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.50
# Mc/sec: 1852.03
//
Query:       EPX72525.1  [L=962]
Description: exchange factor Cdc25p-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-48  163.9   0.5    8.9e-48  162.8   0.5    1.6  1  RasGEF    RasGEF domain
    7.1e-19   68.0   0.7    7.1e-19   68.0   0.7    2.3  2  RasGEF_N  RasGEF N-terminal motif
  ------ inclusion threshold ------
      0.016   14.8   0.5      0.049   13.1   0.0    1.9  2  Imm47     Immunity protein 47


Domain annotation for each model (and alignments):
>> RasGEF  RasGEF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  162.8   0.5   1.5e-51   8.9e-48       1     176 [.     730     906 ..     730     907 .. 0.97

  Alignments for each domain:
  == domain 1  score: 162.8 bits;  conditional E-value: 1.5e-51
      RasGEF   1 elAeqltlieaelfskikpeellgsawskedrspnveaviarfnrlsnwvaseilseeslkkRakviekfikiakecrklnNfnslmailsaLqsspvs 99 
                 ++A q t+ie++ f++i  +e+++++w  +++++ ++ +i+++n ++ w++++il+++++k Ra vi++fi++a ec  ++Nf++l+ai+saL+s+pv+
  EPX72525.1 730 DFAIQATIIEFDCFKSIPTSEWINKRWLDHRSCSAIRDSINFSNCFTFWIINCILERKNVKARAFVISYFIQVAYECLAIHNFSTLIAIVSALNSAPVY 828
                 5899***********************99987799**************************************************************** PP

      RasGEF 100 rLkktweavskkslktleeleelmspennfknyrealkssasskpciPflglyltdltfieegnpdtl...egkiNfeKr 176
                 rL+ + ++vs ++++ l+ l+e++++++nf +yr+ +k++  + pc+Pflg++l+dltfi+egn++ +    + iNf+Kr
  EPX72525.1 829 RLRAAYKQVSLDDTNKLKGLQEVVESKKNFVAYRTLIKQI--ELPCVPFLGVFLSDLTFIDEGNSEIIdgfPHLINFSKR 906
                 ****************************************..999*******************9999886667*****8 PP

>> RasGEF_N  RasGEF N-terminal motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1      0.54   3.2e+03      63     101 ..     396     436 ..     356     439 .. 0.57
   2 !   68.0   0.7   1.2e-22   7.1e-19       2     103 ..     578     681 ..     577     683 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.54
    RasGEF_N  63 nswnsksssn......irl..rvlsvlkewvenhyydfsddkallsk 101
                 n++      +      i+    vl  + +w  +   d s+d  l+++
  EPX72525.1 396 NLI------DdicyplISQckEVLTCIEKWNLSTLVDSSNDNSLHLF 436
                 333......13444444444689999999999999999988877665 PP

  == domain 2  score: 68.0 bits;  conditional E-value: 1.2e-22
    RasGEF_N   2 vkagtlekLierLtskrlldddfletFLltyrsFttpaeLlekLieryeinppnnlesdesnswnsksssnirl.rvlsvlkewvenhyy.dfsddka. 97 
                 +++gtl +L+++L+++ ++d++f ++FLltyrsF+t++eLl++Li  y+ + p++ ++d+  + + k+++ i+  +++ v++ wv+++++ d++++++ 
  EPX72525.1 578 LRGGTLSALVNYLVANVHMDKEFRHIFLLTYRSFVTANELLSLLIMKYHSSIPPDITEDK--LSIWKKKDLIKKkNICTVMNLWVQKYFAeDLNSKRVl 674
                 79**********************************************965555555553..3444444557776***************888888766 PP

    RasGEF_N  98 .llskle 103
                  +ls+l 
  EPX72525.1 675 vCLSELS 681
                 5666665 PP

>> Imm47  Immunity protein 47
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1      0.33   1.9e+03      72     133 ..     331     395 ..     306     403 .. 0.67
   2 ?   13.1   0.0   8.3e-06     0.049      78     164 ..     838     925 ..     825     939 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.33
       Imm47  72 avathedlrdsnnllflsevnkeavdtfaseaitslslevipyll..alleewdeir.dtaviir 133
                 ++a  ed+  ++n    + +n +    f s+a t  sl+   y+l    +e  ++++ +t+++  
  EPX72525.1 331 SIAFVEDIPTAENGPGNGLANSADDARFLSSASTLSSLDTYLYFLfqICVESMEKLKsETSIVDD 395
                 56666777777777777777888888899999999999998887622345777777514554443 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 8.3e-06
       Imm47  78 dlrdsnnllflsevnkeavdtfasea.itslslevipyllalleewdeirdtaviirdsidsfinfkeqlgeeatvdeigeyykdyle 164
                  l d+n+l+ l ev ++  +  a  + i  + l  +p+l  +l +   i +    i d    +inf ++    + vdei  +   + +
  EPX72525.1 838 SLDDTNKLKGLQEVVESKKNFVAYRTlIKQIELPCVPFLGVFLSDLTFIDEGNSEIIDGFPHLINFSKRQRICSVVDEICSFQSVFYN 925
                 588***************999997653789***************************************999********99766554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (962 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       543  (0.0302861); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.70u 0.25s 00:00:00.95 Elapsed: 00:00:00.43
# Mc/sec: 6686.17
//
Query:       EPX72526.1  [L=1083]
Description: DNA polymerase delta catalytic subunit Cdc6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   6.5e-153  509.7   0.2   9.2e-153  509.2   0.2    1.2  1  DNA_pol_B       DNA polymerase family B
    9.6e-91  304.4   0.1    1.6e-90  303.6   0.1    1.4  1  DNA_pol_B_exo1  DNA polymerase family B, exonuclease domain
    5.7e-19   68.4   6.8    1.4e-18   67.1   6.8    1.7  1  zf-C4pol        C4-type zinc-finger of DNA polymerase delta
    0.00099   18.1   0.1     0.0036   16.2   0.0    1.9  2  DNA_pol_B_2     DNA polymerase type B, organellar and viral
  ------ inclusion threshold ------
      0.039   13.9   0.1       0.27   11.2   0.1    2.3  1  RNase_H_2       RNase_H superfamily


Domain annotation for each model (and alignments):
>> DNA_pol_B  DNA polymerase family B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  509.2   0.2  2.6e-156  9.2e-153       1     459 []     522     953 ..     522     953 .. 0.97

  Alignments for each domain:
  == domain 1  score: 509.2 bits;  conditional E-value: 2.6e-156
                 S-HHHHHHS-HHHHHHHHHHHHHHHTTBE-B-----.--SS.-S----BE----EEESS-EEEEEETTHHHHHHHHTT-STTTCE-HCCHCC.T--BTT CS
   DNA_pol_B   1 iplsrvledgqqirveslLlrlakeegfilpdrtekkgkeeegYqGatVlePkkglydkpvlvlDFaSLYPsiiqahNlcyttlvaseeeak.eleaed 98 
                 +p++++l++gqq++v s+L+r+a ++++++p+ + + g++e +Y+GatV+eP+kg+yd+p+++lDF+SLYPsi+qahNlcyttl+  +++++ +l++++
  EPX72526.1 522 VPFNYLLSRGQQVKVISQLFRKALQHDLVVPNIKVN-GTDE-QYEGATVIEPTKGYYDTPIATLDFSSLYPSIMQAHNLCYTTLLDPNTAKSlNLKPNE 618
                 578999*************************88888.6666.7******************************************99999888888866 PP

                 ...TEEE-TCC-EEE-TTS---HHHHHHHHHHHHHHHHHHHHHCS--HHHHHHHHHHHHHHHHHHHHHHHHHTSTTSTT--HHHHHHHHHHHHHHHHHH CS
   DNA_pol_B  99 eyleveveprlvefvkksvregllpklLkdllakRkaikkelkeekdefekalldkqQlalKvtaNsvYGftGvansrlpclalAasvTtiGRemLekt 197
                    +++++p++++fvk++vr+gllp++L+dll++Rk++k++lk+ekd+f+ka+ld +QlalKv+aNsvYGftG++n+rlpcla+++svT++GR+m+ekt
  EPX72526.1 619 ---DYSITPNGDYFVKPQVRKGLLPIILADLLNARKRAKADLKNEKDPFKKAVLDGRQLALKVSANSVYGFTGATNGRLPCLAISSSVTSYGRQMIEKT 714
                 ...99********************************************************************************************** PP

                 HHHHHHT...SSGGGT-SS.....T-EEEEEBSSEEEEE-S-SSHHHHHHHHHHHHHHHHT.TSTTT--EEEEEEEEEEEEEETTEEEEEEEEESSTTS CS
   DNA_pol_B 198 kelvekkaellskllalpeeaeeeklkviYGDTDSvfielkvkdveellkigkelaeevseklfkkplklefekvykkllLisKKkYaglkvektskan 296
                 ke+ve++   ++ ++++++     ++ viYGDTDSv+++++vk++ e++k+g+++a  vs+  f +p+klefekvy+++lLisKK+Yagl++++t++++
  EPX72526.1 715 KEVVEDH---FRIQNGYSH-----DAVVIYGDTDSVMVKFGVKTLPEAMKLGEKAADFVSN-HFIDPIKLEFEKVYFPYLLISKKRYAGLFWTRTDTFD 804
                 *****88...777888988.....9************************************.9************************************ PP

                 EEEEESSGGGSTTS-HHHHHHHHHHHHHHSSS....S-HHHHHHHHHHHHHHHHHHHHTT-S-GGGG-EEEEESS.CCCSSGCCSHHHHHHHHHHHHC. CS
   DNA_pol_B 297 klliKGvdlvRrdncklvkevikkvlelllkdeteersleeglealksilkdvleeleenkvplekfvlskelskepenyksknlphlevakrlkkrn. 394
                 k+++KG+++vRrdnc+lv+ vi++ l+++l d    +++e + e+ ks++    ++l +nkv+++++v++k+lsk  ++y +k+ +h+e+a+r++kr+ 
  EPX72526.1 805 KMDSKGIETVRRDNCPLVSYVIDTALRKMLID----QDVEGAQEFTKSVI----SDLLQNKVDMSQLVITKALSK--TDYAAKQ-AHVELAERMRKRDa 892
                 ********************************....******99999999....9********************..6999999.*************9 PP

                 SS---TTCEEEEEEBETSS.....SS-GGGTEEEHHHHHHCCSEB-HHHHHH.TTHHHHHHHHTTS CS
   DNA_pol_B 395 eeapevgdrisYvivekkkevkkknllaseraedpeyvleknlpidieyYls.qllkevarlleai 459
                 ++ap +gdr++Yvi++ ++     +++ + r edp yvle+n+pid++yYl+ ql k++ r++e+i
  EPX72526.1 893 GSAPAIGDRVAYVIIKGAR-----GDQFYMRSEDPIYVLENNIPIDAKYYLEnQLSKPLLRIFEPI 953
                 9****************97.....9**************************************986 PP

>> DNA_pol_B_exo1  DNA polymerase family B, exonuclease domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  303.6   0.1   4.5e-94   1.6e-90       2     337 .]     121     458 ..     120     458 .. 0.94

  Alignments for each domain:
  == domain 1  score: 303.6 bits;  conditional E-value: 4.5e-94
                     ECTTSEEEEEEEE---EEEEEESSCGGHHHHHHHHHHHCCTTCCCEE..EEEEEECCCCEECCTSSCCHHC.EEEEEESSTCHHHHHHHHHHH.. CS
  DNA_pol_B_exo1   2 teegksvcvnvfgfkpyfYceapdgkeleevkeelkelyeelskkvt..kivkvelvlkkslygyekkpvp.ylkvsvsnpnelkkirkelsp.. 91 
                     t++g+s++++v+gf pyfY++ap g+++    e ++++++el++ ++   i++++l +k++lyg++ ++++ ++k+++++p+ ++++r+ +++  
      EPX72526.1 121 TDHGNSILTHVTGFLPYFYIKAPVGFRA----EMIEQFSRELDAVCNggVIDHCTLEMKENLYGFQGNEKSpFIKIFITDPRLVSRARNVFERne 211
                     89*************************9....4444444444555555569*****************999********************99** PP

                     ......CCCCCCCCSSS--HHHHHHHHCTS-TTCEEEEE..TEEEEGCC--C-.SEEEEEETTTSCEETTTCC....S-EEEEEEEEEETEETTS CS
  DNA_pol_B_exo1  92 ......leeivdvyeydvdylerflidnkivgfgwysvk..kylvraegkisncdveidcdvddliakpkese....pplrvlsFDIeckskkgk 174
                             + v ++e++++yl+rf+id+++ g++w++++  ky++r ++ +s c++e +++++dli+ p+e+e    +plr+lsFDIec+++kg 
      EPX72526.1 212 mnfeglFPTSVITFESNTQYLMRFMIDCNVAGMSWLQLPagKYQFRYQNCVSDCQIEAWIHYKDLISLPAEGEwlkmAPLRILSFDIECAGRKGI 306
                     ******77789************************************************************************************ PP

                     EETTTT..--EEEEEEEECCTC.SS.SEEEEEEECCCTSS----EE--SSTCSTTEEEEEESSHHHHHHHHHHHHHHH--SEEEESSTTTTHHHH CS
  DNA_pol_B_exo1 175 fpdaensedpiiqIscvldglgekepearklftlrecaseeeedfeltpkpeypgvkvlefdsEkelLqaflefikqydPdvitgYNidnFDlpY 269
                     fpda++  dp+iqI+ ++ ++g+k+p+ r++f++++c+            ++  g++v+ef+s  e+L a+ +f++++dPdv++gYNi nFD+pY
      EPX72526.1 307 FPDASI--DPVIQIANIVTQYGDKDPFVRNVFCVDTCS------------QI-VGTHVFEFQSQSEMLLAWSKFVREVDPDVMIGYNISNFDFPY 386
                     ******..******************************............88.9***************************************** PP

                     HHHHHHHCCTCCHCG.SCCSCTCEECCCCESEE.....EEEECEEEETTSEEEEHHHHHHHHSSSSG-SHHHH CS
  DNA_pol_B_exo1 270 ilnRakelykvklsklgrlnkggrskvseigfs.....kqarekvkisgrihlDlyrvvkrklklpsYkLnav 337
                     +l+Rak+l +++++ +gr+ k+     ++++fs     ++++++++i+gr++lDl++v++r++kl+sY+Lnav
      EPX72526.1 387 LLDRAKTLRVNDFPLIGRI-KNYYTVAKDTTFSskaygTRESKSIQIPGRLQLDLLQVMQRDFKLRSYSLNAV 458
                     *******************.777777777777777899*********************************98 PP

>> zf-C4pol  C4-type zinc-finger of DNA polymerase delta
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.1   6.8   3.8e-22   1.4e-18       1      70 []     990    1061 ..     990    1061 .. 0.90

  Alignments for each domain:
  == domain 1  score: 67.1 bits;  conditional E-value: 3.8e-22
    zf-C4pol    1 ClvCk...eklkkalCkkCrsdkqesllkllsrlkelekklneletvCqsCaqgsleeevkCdsrdCpvfYeR 70  
                  Cl+Ck   +k+k+alC++C ++++e ++ ++ ++++le ++++l+t+Cq+C qgs++++v C+srdCp+fY+R
  EPX72526.1  990 CLGCKapiKKSKAALCDNCIDRSAELYQLQVGQVNDLEIRFARLWTQCQRC-QGSMHQDVICSSRDCPIFYMR 1061
                  *****7776677*******8555555888999*******************.9*******************9 PP

>> DNA_pol_B_2  DNA polymerase type B, organellar and viral
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0     1e-06    0.0036     126     252 ..     475     602 ..     445     675 .. 0.73
   2 ?   -2.0   0.0      0.35   1.2e+03      79     108 ..     775     804 ..     769     813 .. 0.87

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1e-06
  DNA_pol_B_2 126 wkekeekkydivketleYckqDvlvlaklllklkesideff..easinifkrpTisslalaifkqilyrkkkkellapskeldkyiRkayrGGrc.yp 220
                   ++ +++  d +  + +Yc +D  + ++l+ kl   ++ +     +   f ++   ++  ++  q++ ++ ++ l++p+ +++    + y G  + +p
   EPX72526.1 475 ITDLHNGTADSRRRLAIYCLKDAYLPQRLMDKLMCFVNYTEmaRVTGVPFNYLLSRGQQVKVISQLFRKALQHDLVVPNIKVNG-TDEQYEGATViEP 571
                  456677777777888888888888888888888776663223323333445555556677888888866666688888888764.4689******777 PP

  DNA_pol_B_2 221 svlgiyeeniyvyDvnSlYPsamthypmPygk 252
                  + +g+y+ +i   D+ SlYPs+m    + y++
   EPX72526.1 572 T-KGYYDTPIATLDFSSLYPSIMQAHNLCYTT 602
                  7.*********************987777765 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.35
  DNA_pol_B_2  79 leikKgkfpykavnelhliysyeqksdgfp 108
                  le++K +fpy  +++ +  + +++ +d+f 
   EPX72526.1 775 LEFEKVYFPYLLISKKRYAGLFWTRTDTFD 804
                  7899**********9999999999998875 PP

>> RNase_H_2  RNase_H superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   7.5e-05      0.27      47     124 ..     361     471 ..     331     507 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 7.5e-05
   RNase_H_2  47 ilelflellekkkalvtfngksFDvpflkrlfkkyklde..................................eefrhiDLlkelrkkkl.esysLksv 110
                 +++ f  +  + + ++ +n ++FD+p+l +++k+ +++                                   + + ++DLl+++++  + +sysL +v
  EPX72526.1 361 AWSKF-VREVDPDVMIGYNISNFDFPYLLDRAKTLRVNDfpligriknyytvakdttfsskaygtresksiqiPGRLQLDLLQVMQRDFKlRSYSLNAV 458
                 44444.44556678999***************77777777777788888888889999999999988777766666899****99776555999**999 PP

   RNase_H_2 111 ekelgierreedls 124
                  +++  e++ ed+ 
  EPX72526.1 459 CAQFLGEQK-EDVH 471
                 888777777.4555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1083 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       760  (0.0423894); expected 358.6 (0.02)
Passed bias filter:                      629  (0.0350828); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.82u 0.26s 00:00:01.08 Elapsed: 00:00:00.43
# Mc/sec: 7651.15
//
Query:       EPX72527.1  [L=272]
Description: ribonuclease H Rnh1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-39  135.1   0.2    3.1e-39  134.4   0.1    1.4  2  RNase_H   RNase H
    6.8e-18   64.7   2.0    1.4e-17   63.7   2.0    1.5  1  Cauli_VI  Caulimovirus viroplasmin


Domain annotation for each model (and alignments):
>> RNase_H  RNase H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.0       1.9   1.7e+04       9      17 ..      96     104 ..      93     107 .. 0.79
   2 !  134.4   0.1   3.4e-43   3.1e-39       4     142 ..     132     270 ..     129     271 .. 0.92

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 1.9
                 EEEEECTTT CS
     RNase_H   9 DGsclgnpg 17 
                 DGs+++n++
  EPX72527.1  96 DGSSSKNKS 104
                 999999865 PP

  == domain 2  score: 134.4 bits;  conditional E-value: 3.4e-43
                 EEEEEEEEEECTTTCE.EEEEEECTT....EEEEEEEC.CCCHHHHHHHHHHHHHHHTT.SCSEEEEEES-HHHHHHHHCCCHHHHHTTSSSETTSSBH CS
     RNase_H   4 vvvYtDGsclgnpgeg.gagavlykeg..arnisaple.eaqtnnraELsAvieaLkalksdekvniytDSkYvvkgitqwvhrwkknawkttseqkpv 98 
                  +vYtDGs+lgn ++g  ag+++y++    rn+s++l  ++qtnnraEL+A+i+aL++  ++ +v i+ DSkY ++++t w ++wkk ++ t+s+  pv
  EPX72527.1 132 EIVYTDGSSLGNGKHGaVAGCGVYFGPgdPRNLSERLLtGEQTNNRAELQAIIHALEN--TSGDVIIRADSKYSIQALTVWNQKWKKTNYMTSSST-PV 227
                 58**********9999889997765543566***99999******************9..788***************************777777.** PP

                 TTHHHHHHHHHCHCSSEEEEEE-SCCSSSTHHHHHHHHHHHHHH CS
     RNase_H  99 knkdlaellkelakkkkvqlkwvkgHaGvpkgNemaDrlAkeaa 142
                 kn dl+ ++++l+++++vql++v+gH+++ +gN++aD lA++aa
  EPX72527.1 228 KNVDLITRATHLMEDRNVQLEYVEGHSSD-YGNQQADLLARRAA 270
                 *****************************.9**********997 PP

>> Cauli_VI  Caulimovirus viroplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.7   2.0   1.6e-21   1.4e-17       2      44 .]      10      52 ..       9      52 .. 0.99

  Alignments for each domain:
  == domain 1  score: 63.7 bits;  conditional E-value: 1.6e-21
    Cauli_VI  2 yYAVakGrepgiYttWdecqkqvkgfpgakyKsFktraeAeaf 44
                yYAVa+Gr++gi+++W++  ++v+g+p+ +yK+Fkt++eA+af
  EPX72527.1 10 YYAVARGRKTGIFNSWNDTVPNVSGYPNSRYKKFKTYDEAKAF 52
                ******************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       434  (0.0242066); expected 358.6 (0.02)
Passed bias filter:                      303  (0.0169); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 2032.99
//
Query:       EPX72528.1  [L=219]
Description: GTPase Ypt1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.6e-65  219.0   0.7    3.2e-65  218.7   0.7    1.1  1  Ras          Ras family
    4.3e-36  123.8   0.1    7.2e-36  123.0   0.1    1.4  1  Roc          Ras of Complex, Roc, domain of DAPkinase
    1.5e-17   63.6   0.2    1.8e-17   63.3   0.2    1.1  1  Arf          ADP-ribosylation factor family
    6.3e-06   25.9   0.4    1.6e-05   24.6   0.2    1.7  2  GTP_EFTU     Elongation factor Tu GTP binding domain
    2.6e-05   23.7   0.1    3.6e-05   23.3   0.1    1.2  1  SRPRB        Signal recognition particle receptor beta subuni
      4e-05   23.1   0.1      6e-05   22.5   0.1    1.3  1  Gtr1_RagA    Gtr1/RagA G protein conserved region
      6e-05   23.1   0.0    0.00011   22.3   0.0    1.4  1  MMR_HSR1     50S ribosome-binding GTPase
      8e-05   22.6   0.4        0.1   12.5   0.0    2.4  2  RsgA_GTPase  RsgA GTPase
     0.0011   19.4   0.1       0.16   12.4   0.0    2.3  2  AAA          ATPase family associated with various cellular a
     0.0094   16.4   0.0      0.014   15.8   0.0    1.4  1  AAA_16       AAA ATPase domain
  ------ inclusion threshold ------
      0.023   14.2   0.0        0.2   11.2   0.0    2.1  1  FeoB_N       Ferrous iron transport protein B
      0.027   14.0   0.1      0.072   12.6   0.0    1.6  2  AAA_7        P-loop containing dynein motor region
      0.028   14.4   0.1       0.12   12.3   0.0    2.1  2  AAA_5        AAA domain (dynein-related subfamily)
      0.041   14.1   0.0      0.072   13.4   0.0    1.8  1  AAA_22       AAA domain
      0.048   12.9   0.1       0.19   10.9   0.0    1.9  2  Septin       Septin
      0.049   13.4   0.0       0.12   12.1   0.0    1.7  1  AAA_29       P-loop containing region of AAA domain
      0.051   14.1   0.1       0.14   12.7   0.1    1.8  1  ABC_tran     ABC transporter
      0.061   13.1   0.1        1.5    8.6   0.0    2.3  2  PduV-EutP    Ethanolamine utilisation - propanediol utilisati
      0.092   12.1   0.0       0.22   10.9   0.0    1.6  2  TniB         Bacterial TniB protein
       0.12   11.9   0.1       0.73    9.4   0.1    2.1  1  AAA_25       AAA domain


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  218.7   0.7   3.6e-68   3.2e-65       1     161 [.      26     186 ..      26     187 .. 0.99

  Alignments for each domain:
  == domain 1  score: 218.7 bits;  conditional E-value: 3.6e-68
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeikr 99 
                 Kl+l+Gds+vGK++lllrf++d+++e+y+sTigvdf++++ie++gk+vkl+iwDTAGqe+f++++++yyr+a+gi++vyd+t+++sf+nvk+w++ei r
  EPX72528.1  26 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFSNVKQWLQEIDR 124
                 89************************************************************************************************* PP

                 HSTTTSEEEEEEETTTGGGG-SS-HHHHHHHHHHHTSEEEEEBTTTTCTHHHHHHHHHHHHH CS
         Ras 100 vaeenvpivLvGnKvDleekravsteegeelakelglkfletSAktnenveeafeellreil 161
                 +a e v+ +LvGnK+D+++k++v+++ ++e+a++l+++fletSAk+++nve+af +++r+i+
  EPX72528.1 125 YAVEGVNRLLVGNKSDMTDKKVVEYTVAKEFADSLSIPFLETSAKDSTNVEQAFLTMARQIK 186
                 ***********************************************************996 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.0   0.1     8e-39   7.2e-36       1     120 []      26     141 ..      26     141 .. 0.91

  Alignments for each domain:
  == domain 1  score: 123.0 bits;  conditional E-value: 8e-39
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE...GHHHHCHH CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd...srssenlk 96 
                 K++l+GdsgvGK++ll rf +d+++e++ stigvdf+ +++ +++g       k+vkl+iWDtaGqerfr+++++y+r+a+ +i+vyd   ++s++n+k
  EPX72528.1  26 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTI-ELEG-------KTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDvtdQDSFSNVK 116
                 89**********************************98876.4544.......6899******************************976555789*** PP

                 HHHHHHHHHCSSS.-EEEEEE-TTT CS
         Roc  97 eWlkelkkvagks.pvilvgnkiDl 120
                 +Wl+e++++a +  + +lvgnk D+
  EPX72528.1 117 QWLQEIDRYAVEGvNRLLVGNKSDM 141
                 *********98763789******96 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.3   0.2     2e-20   1.8e-17      14     132 ..      24     146 ..      12     189 .. 0.81

  Alignments for each domain:
  == domain 1  score: 63.3 bits;  conditional E-value: 2e-20
                 EEEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSS..EEEEEEEE..TTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHHHHHH CS
         Arf  14 elrilllGLDnaGKtTilkklkleelvt.tvPTig..fnveelei..knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkal 107
                  +++ll+G  + GK+ +l ++ ++  ++  + Tig  f+++++e   k++k+++wD  Gqe+ R + ++Y++  +++i v D++d++ +++ k+ L+++
  EPX72528.1  24 LFKLLLIGDSGVGKSCLLLRFADDTYTEsYISTIGvdFKIRTIELegKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFSNVKQWLQEI 122
                 589********************99877578898744677777665599************************************************96 PP

                 CTSGCCTTSEEEEEEE-TTSTTSS- CS
         Arf 108 leeeelkevallvlaNKqDlpeals 132
                  ++  ++ v  l+++NK D+++   
  EPX72528.1 123 -DRYAVEGVNRLLVGNKSDMTDKKV 146
                 .78899*************987643 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       2.3   2.1e+03       6      22 ..      27      43 ..      24      55 .. 0.79
   2 !   24.6   0.2   1.8e-08   1.6e-05      56     183 ..      61     176 ..      44     203 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 2.3
                EEEEESTTSSHHHHHHH CS
    GTP_EFTU  6 igiighvDhGKtTLtdr 22
                + +ig+   GK++L+ r
  EPX72528.1 27 LLLIGDSGVGKSCLLLR 43
                578999999***99855 PP

  == domain 2  score: 24.6 bits;  conditional E-value: 1.8e-08
                 SSCEEEEEETTCSSEEEEEEEESSSGGGHHHHHHHHHT-SEEEEEEETTTB.....STHHHHHHHHHHHHTTTEEEEEEESCGSTHHHHHHHHHHHHHH CS
    GTP_EFTU  56 iksaaisleketkkylinliDtPGHvdFskevirglrvlDgavlvvdaveG.....vepqteevlrlalkegvpiivfiNKmDrlkaelkeiveevkqk 149
                  k+ +i+le  +k+ ++++ Dt G + F   ++  +r ++g ++v d+++      v++  +e+ r a  egv++ ++ NK D++++++ e   +v ++
  EPX72528.1  61 FKIRTIELE--GKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQdsfsnVKQWLQEIDRYA-VEGVNRLLVGNKSDMTDKKVVEY--TVAKE 154
                 466677777..*************************************97754443444444443333.36777***********8776543..23333 PP

                 HHHHHHHHHHHHHTTTTTEEEEEEBTTTTBTHHH CS
    GTP_EFTU 150 lsrkeeklekygekgekevpvvfgSalkgegvkt 183
                 +           +++   +p++ +Sa++  +v++
  EPX72528.1 155 F-----------ADS-LSIPFLETSAKDSTNVEQ 176
                 4...........222.246666666666666665 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.1     4e-08   3.6e-05       6     126 ..      27     143 ..      23     177 .. 0.86

  Alignments for each domain:
  == domain 1  score: 23.3 bits;  conditional E-value: 4e-08
                 EEEE-STTSSHHHHHHHHHHSS---B---S.S-EEETTG.....GGTT-SEEEETT-GCCSHHHHHHHHHHGGEEEEEEEEETTS-HHHHHHHHHHHHH CS
       SRPRB   6 vllvGlsdsGKTslftrLttdsvkktvtSq.essaalkv..ksekgskltliDfPGheklrqklleklkaksslkglvfvvDStidpkevkevAEllye 101
                 +ll+G s  GK  l+ r   d+++++++S     +  ++   + k  kl++ D  G+e++r+  +    + + ++g++ v D t d+    +v  +l e
  EPX72528.1  27 LLLIGDSGVGKSCLLLRFADDTYTESYISTiGVDFKIRTieLEGKTVKLQIWDTAGQERFRTITSS---YYRGAHGIIIVYDVT-DQDSFSNVKQWLQE 121
                 79***************************97667777663345667788899*********86555...5889*********87.8999********** PP

                 HHHHHHHHTT---EEEEEE-TTSTT CS
       SRPRB 102 illiteklkdavdiliACnKqelfl 126
                 i    +   ++v+ l+  nK++++ 
  EPX72528.1 122 IDRYAV---EGVNRLLVGNKSDMTD 143
                 988888...8999999999999874 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.1   6.6e-08     6e-05       1     106 [.      26     123 ..      26     160 .. 0.70

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 6.6e-08
   Gtr1_RagA   1 kvLLmGksgsGKtsmrsiiF.dnylardtlrlgatidveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDvesreleedletl 98 
                 k+LL+G sg GK+++      d y+   + ++g+  +++  e+   + ++l++wD  Gqe+f + +     ++ +r    +i V Dv++++   ++++ 
  EPX72528.1  26 KLLLIGDSGVGKSCLLLRFAdDTYTESYISTIGVDFKIRTIEL-EGKTVKLQIWDTAGQERFRTIT-----SSYYRGAHGIIIVYDVTDQD---SFSNV 115
                 89************98664413455555556666666665555.35678************98875.....66788888899999999654...33333 PP

   Gtr1_RagA  99 keilealr 106
                 k+ l+++ 
  EPX72528.1 116 KQWLQEID 123
                 44444444 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   1.2e-07   0.00011       2     104 ..      27     122 ..      26     147 .. 0.62

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 1.2e-07
                 EEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEETT..EEEEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEETT.TTCSHHHHHHH CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvklkg..keielvDtpGliegaseekglgkaflaleeadlillvvdas.eeklkpldeel 97 
                  +++G + vGKS L+ +  +++   s +     d + ++++l+g   +++++Dt+G  e   + + ++ ++ +   a+ i++v d++ ++++    +++
  EPX72528.1  27 LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGktVKLQIWDTAG-QE---RFRTITSSYYR--GAHGIIIVYDVTdQDSF----SNV 115
                 579****************975544444444444444444433323669*******.54...23355555553..599*******8743334....444 PP

                 HHHHHHT CS
    MMR_HSR1  98 eelleea 104
                 +++l+e 
  EPX72528.1 116 KQWLQEI 122
                 4444432 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   0.0   0.00011       0.1     103     122 ..      28      47 ..       6      99 .. 0.84
   2 !    8.6   0.1    0.0017       1.6      33     106 ..     113     190 ..      83     203 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00011
                  EEECSTTSSHHHHHHHHCTT CS
  RsgA_GTPase 103 vlvGqSGvGKStLinallpe 122
                  +l+G SGvGKS L+ +++ +
   EPX72528.1  28 LLIGDSGVGKSCLLLRFADD 47 
                  79***********9877765 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0017
                  HHHHHHHHHH...HHTT-EEEEEEE-GGG--HHH.HHHHHHHHHHHTTSEEEE--TTTHTTHHHHHHHCTTSEEEEEC CS
  RsgA_GTPase  33 nlldrfLvla...eekgiepvivlnKiDlleeee.eleelkeelealgyevllvsaktkegleelkellkdktsvlvG 106
                  + +++ L ++     +g++ ++v nK D+++++  e++  ke   +l +++l +sak+++++e+    ++ ++   +G
   EPX72528.1 113 SNVKQWLQEIdryAVEGVNRLLVGNKSDMTDKKVvEYTVAKEFADSLSIPFLETSAKDSTNVEQAFLTMARQIKERMG 190
                  445555544410045678999**********99978888999999*************99999876666666655555 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.0   0.00018      0.16       1     119 [.      27     146 ..      27     150 .. 0.74
   2 ?    4.9   0.1     0.036        33      13      50 ..     150     189 ..     149     204 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00018
                 EEEESSTTSSHHHHHHHHHHHH.............THEEEEEETTTCS.SSSTTHHHHHHHHHHHHHHHTSTS.EEEEEETGGGHHHHHTTCCCHHHHH CS
         AAA   1 vllyGppGtGKTllakavakel.............gvefleisgsell.skyvgesekkirelfkeakekakp.silfiDEidalaksrsgseseeeer 84 
                 +ll+G  G+GK+ l    a ++             +++ +e++g+++  + +  ++++++r + ++  + a +  i++ D  d+   s+          
  EPX72528.1  27 LLLIGDSGVGKSCLLLRFADDTytesyistigvdfKIRTIELEGKTVKlQIWDTAGQERFRTITSSYYRGA-HgIIIVYDVTDQDSFSN---------- 114
                 69*******************644444444444446789999999999677999999*******9999998.73555555555555555.......... PP

                 HHHHHHHHHHHTTTSSSTEEEEEEESSGGGSTHHH CS
         AAA  85 vvnqLlteldgvkkkeskvivigatnrpdkldpal 119
                  v+q l+e+d++  +   v  ++++n+ d+ d+++
  EPX72528.1 115 -VKQWLQEIDRYAVE--GVNRLLVGNKSDMTDKKV 146
                 .78888888888773..477777777777777765 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.036
                 HHHHHHHHHHTHEEEEEETTTCSSS..STTHHHHHHHHHH CS
         AAA  13 llakavakelgvefleisgsellsk..yvgesekkirelf 50 
                 ++ak  a +l+++fle+s+++ ++    +  ++++i+e +
  EPX72528.1 150 TVAKEFADSLSIPFLETSAKDSTNVeqAFLTMARQIKERM 189
                 68999***************99943346666666666655 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   1.6e-05     0.014      27     103 ..      27     124 ..      26     192 .. 0.68

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1.6e-05
      AAA_16  27 vllsGesGvGKsslvrellr.alekd...........ggiflrgkcdqlesaipysalaqalareellrqllde.................aesaelea 96 
                 +ll+G+sGvGKs l+ ++++  ++++           + i l+gk+++l       ++++++ + e +r + +                  ++ +++ +
  EPX72528.1  27 LLLIGDSGVGKSCLLLRFADdTYTESyistigvdfkiRTIELEGKTVKL-------QIWDTAGQ-ERFRTITSSyyrgahgiiivydvtdqDSFSNVKQ 117
                 79*************8887625555566666665544333366666666.......67777744.6666666555555555555555555555566666 PP

      AAA_16  97 wreklee 103
                 w +++++
  EPX72528.1 118 WLQEIDR 124
                 6666655 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00022       0.2       2     151 ..      26     176 ..      25     181 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00022
                 EEEEEESTTSSHHHHHHHHHTTSEEEEESTTSSSEEEEEEEEETT..EEEEEEE----SSSSSSSHHHHHHHHHHHCTSSS.EEEEEEEG...GGHHHH CS
      FeoB_N   2 tvalvGnpnvGkttlfnaltgakqkvgNwpGvtvekkegklklkg..keveivDlPGiYslsayseeekvardflleeepd.vvvnvvda...tnlern 94 
                 ++ l+G+  vGk+ l+ + ++ + + +  + + v+ k  +++l+g   +++i D  G   + +++       ++    +   +v +v d    +n+++ 
  EPX72528.1  26 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGktVKLQIWDTAGQERFRTIT------SSYYRGAHGIiIVYDVTDQdsfSNVKQW 118
                 5679999999***9999999999999999999999998888887722455677888776665544......4443322222033345554222456666 PP

                 HHHHHHHHHTTSSEEEEEETHHHHHHTTEEE-H.HHHHHHHTS-EEEEBTTTTBTHHH CS
      FeoB_N  95 LyLtlqllelgvpvvlalnmideaekkgieidl.kkLsekLgvpvvktsakkkegiee 151
                 L+ + + +  gv+ +l+ n++d  +kk +e  + k+++++L +p ++tsak+++++e+
  EPX72528.1 119 LQEIDRYAVEGVNRLLVGNKSDMTDKKVVEYTVaKEFADSLSIPFLETSAKDSTNVEQ 176
                 6666666667889999999*****999999875267999************9999987 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0     8e-05     0.072      25      72 ..      16      64 ..      10      71 .. 0.75
   2 ?   -1.9   0.0       2.3   2.1e+03      63      89 ..     160     188 ..     123     203 .. 0.52

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 8e-05
       AAA_7 25 llelllknkkpvllvGptGtGKtviikdllkkldkekyls.ltinfsaq 72
                l++   +   ++ll+G++G+GK++++ ++ +   +e+y+s + + f+ +
  EPX72528.1 16 LMQNRYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYIStIGVDFKIR 64
                555555666789****************888777777654155666655 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 2.3
       AAA_7  63 lsltinfsaqtsanqlqd..iiesklekr 89 
                 ++ +++ sa+ s n  q   ++ ++++ r
  EPX72528.1 160 SIPFLETSAKDSTNVEQAflTMARQIKER 188
                 44444444433333333300334444444 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   0.00014      0.12       2      23 ..      27      48 ..      26     144 .. 0.83
   2 ?   -0.3   0.0       1.1   9.9e+02      15      64 ..     151     204 ..     149     214 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00014
                EEEE--SSSSHHHHHHHGGGGB CS
       AAA_5  2 vlLvGppGtgKselaerlaaal 23
                +lL+G++G+gKs l  r+a  +
  EPX72528.1 27 LLLIGDSGVGKSCLLLRFADDT 48
                89***************99877 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 1.1
                 HHHHGGGGBS--EEEEE--TT--HHH..HH--B--...........-------- CS
       AAA_5  15 laerlaaalnreveyvqltrdtteed..lkgrreik..ngttslvdsplvraar 64 
                 +a+++a  l  ++++   +++t+ e+  l++ r+ik  +g+t ++ s ++ +++
  EPX72528.1 151 VAKEFADSLSIPFLETSAKDSTNVEQafLTMARQIKerMGNTTFSSSNAKSSVK 204
                 566666666666666666666666654477777777888888888887777666 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   8.1e-05     0.072       8      38 ..      27      61 ..      26     193 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 8.1e-05
      AAA_22  8 lvvtGesGtGKTtllrrlleqldeeakaee....e 38
                l+++G sG+GK+ ll r+++    e+++ +     
  EPX72528.1 27 LLLIGDSGVGKSCLLLRFADDTYTESYISTigvdF 61
                689***************99876555555555442 PP

>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00022      0.19       5      71 ..      25      82 ..      22      94 .. 0.68
   2 ?   -1.0   0.0      0.97   8.7e+02      74      96 ..     170     192 ..     136     205 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00022
                EEEEEEEBTTSSCCCCCCTTSSSS------------------S-EEEEEEEEETTCEEEEEEEE--- CS
      Septin  5 ftlmvvGesglGkttlintlfetdlieeekleeasekkkktveikkkkvvieedgvklnltviDtpg 71
                f l+++G+sg+Gk+ l+  +  ++ +e+         ++  v++k ++ ++e++   ++l++ Dt g
  EPX72528.1 25 FKLLLIGDSGVGKSCLLLRFADDTYTESY-------ISTIGVDFKIRTIELEGK--TVKLQIWDTAG 82
                89**************9876554444442.......223455555566556555..44555667765 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.97
                 SSSSHHCCCHHHHHHHHHHHHHH CS
      Septin  74 davdnskswepiveyideqfeey 96 
                 d+ + ++++ +++++i+e++ + 
  EPX72528.1 170 DSTNVEQAFLTMARQIKERMGNT 192
                 77788888888888888887654 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00013      0.12      25      39 ..      27      41 ..      10      42 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00013
      AAA_29 25 tlltGpsGsGKSTll 39
                 ll+G+sG+GKS ll
  EPX72528.1 27 LLLIGDSGVGKSCLL 41
                79**********997 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   0.00016      0.14      14      67 ..      27      79 ..      25     216 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 0.00016
                EEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 14 vaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqe 67
                + ++G++G GKS Ll  +a  +  te  i   g d+k +++e   k ++    +
  EPX72528.1 27 LLLIGDSGVGKSCLLLRFADDTY-TESYISTIGVDFKIRTIELEGKTVKLQIWD 79
                679************99998876.788886667777776666666665554444 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.0    0.0017       1.5       3      50 ..      26      75 ..      24      83 .. 0.82
   2 ?    1.9   0.0      0.19   1.7e+02      88     117 ..      93     121 ..      83     134 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0017
   PduV-EutP  3 killiGkvgsGKttLtqalkgeel..kYkktqaiefsdeviDtPGeylen 50
                k+lliG +g+GK  L  ++ +++   +Y +t  ++f+ ++i+  G+ ++ 
  EPX72528.1 26 KLLLIGDSGVGKSCLLLRFADDTYteSYISTIGVDFKIRTIELEGKTVKL 75
                789*************9999865423799999999999999988876665 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.19
   PduV-EutP  88 fnkeviGiitkidlaedeenieaveelLks 117
                   +   Gii   d++ d+++ ++v+++L++
  EPX72528.1  93 YYRGAHGIIIVYDVT-DQDSFSNVKQWLQE 121
                 556667999999999.999********987 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00024      0.22      37      60 ..      26      49 ..       9      72 .. 0.86
   2 ?   -2.5   0.0       3.1   2.8e+03      94      98 ..     159     163 ..     141     189 .. 0.45

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00024
        TniB 37 nlllvGdsnnGKtmivekFarlhp 60
                +lll+Gds +GK+ ++ +Fa++  
  EPX72528.1 26 KLLLIGDSGVGKSCLLLRFADDTY 49
                69******************8864 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 3.1
        TniB  94 lgapl 98 
                 l+ p+
  EPX72528.1 159 LSIPF 163
                 33333 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.1   0.00082      0.73      35      58 ..      26      49 ..       9     195 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00082
      AAA_25 35 lallaGapgtGKttlaldlalava 58
                  ll+G++g+GK+ l+l  a ++ 
  EPX72528.1 26 KLLLIGDSGVGKSCLLLRFADDTY 49
                579**************9987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       632  (0.0352502); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                        20  (0.00111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              20  [number of targets reported over threshold]
# CPU time: 0.53u 0.30s 00:00:00.83 Elapsed: 00:00:00.45
# Mc/sec: 1467.28
//
Query:       EPX72529.1  [L=236]
Description: optic atrophy 3 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.7e-44  148.9   0.5    5.7e-44  148.9   0.5    1.9  2  OPA3             Optic atrophy 3 protein (OPA3)
  ------ inclusion threshold ------
      0.033   14.1   0.0      0.064   13.2   0.0    1.6  1  HLH              Helix-loop-helix DNA-binding domain
      0.033   14.0   0.1       0.12   12.2   0.0    1.9  2  RMI1_C           Recq-mediated genome instability protein 1, 
      0.039   12.0   0.0      0.051   11.6   0.0    1.1  1  Totivirus_coat   Totivirus coat protein
        9.9    6.2   8.8         17    5.5   0.1    2.4  3  Peptidase_S49_N  Peptidase family S49 N-terminal


Domain annotation for each model (and alignments):
>> OPA3  Optic atrophy 3 protein (OPA3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.9   0.5   1.6e-47   5.7e-44       3     122 ..       5     125 ..       3     128 .. 0.91
   2 ?   -0.9   0.3      0.37   1.3e+03      99     110 ..     175     186 ..     148     198 .. 0.64

  Alignments for each domain:
  == domain 1  score: 148.9 bits;  conditional E-value: 1.6e-47
        OPA3   3 llKLaslavRtlsKPianrikaqakehprfrkvcirlaqalhrlemrlrlrllgd...ekaarkirpLseekAvelGAellgEafifsvagglilyEyw 98 
                 +lK++sl+vRtlsKPian+ikaqakeh++frkvci +aq++hr e+++ ++  +     ++  ++rpL+++kAv++GA++l+E+f+f+vagg+il+E+w
  EPX72529.1   5 ALKIGSLLVRTLSKPIANTIKAQAKEHKTFRKVCIDFAQMMHRAEFKI-MGANRArsgLTN-VRVRPLNDAKAVDAGANFLSETFVFTVAGGAILFETW 101
                 79*********************************************9.444444343233.79*********************************** PP

        OPA3  99 rssrkeakkeeevkeeleeleeri 122
                 r +rke++++++++e +  l+++i
  EPX72529.1 102 RVRRKEKNRRDNITEAIFGLQQEI 125
                 *****************9999987 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.37
        OPA3  99 rssrkeakkeee 110
                  s++ke++ke++
  EPX72529.1 175 SSKEKEESKERK 186
                 334444444444 PP

>> HLH  Helix-loop-helix DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.8e-05     0.064       8      28 ..     106     126 ..     102     179 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.8e-05
                 HHHHHHHHHHHHHHHHHHCST CS
         HLH   8 rErrRRdriNsaleeLrellP 28 
                  E++RRd+i +a++ L++ + 
  EPX72529.1 106 KEKNRRDNITEAIFGLQQEII 126
                 6***************99765 PP

>> RMI1_C  Recq-mediated genome instability protein 1, C-terminal OB-fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   3.3e-05      0.12      60     123 ..      76     143 ..      65     176 .. 0.77
   2 ?   -1.3   0.1       0.5   1.8e+03      64      92 ..     165     193 ..     161     198 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 3.3e-05
      RMI1_C  60 vdlssevlteligfspa...elkeslalkkd.qkkrqklkealkeaqekLidleclmeielnpaskkp 123
                 vd   ++l+e   f++a    l e+ +++++ +++r++++ea+   q+++i++++++e ++ +++ k 
  EPX72529.1  76 VDAGANFLSETFVFTVAggaILFETWRVRRKeKNRRDNITEAIFGLQQEIIRINGILEKQMLEKKVKG 143
                 66777888899999998887566777766552788899*******************98887775444 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.5
      RMI1_C  64 sevlteligfspaelkeslalkkdqkkrq 92 
                 + v +el  +s +e +es++ k+d+++++
  EPX72529.1 165 HAVEQELHTLSSKEKEESKERKNDDSNQD 193
                 55666777788888777788777777665 PP

>> Totivirus_coat  Totivirus coat protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   1.4e-05     0.051     443     521 ..      15     109 ..       8     124 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 1.4e-05
  Totivirus_coat 443 rrtqpafeaieltgerdtaysayrvkmrsaRt.sallaatanrpkngLanlrlrqfdsnavvlpgdp...............gtenatvkdkkea 521
                     ++++p+ + i+ + ++ +++ ++ + +  + + + + ++ anr+ +gL n+r+r ++ ++ v  g +                 e+ +v+ k+++
      EPX72529.1  15 TLSKPIANTIKAQAKEHKTFRKVCIDFAQMMHrAEFKIMGANRARSGLTNVRVRPLNDAKAVDAGANflsetfvftvaggaiLFETWRVRRKEKN 109
                     7899**********************987665156778889*******************99999667777777777776666666666666666 PP

>> Peptidase_S49_N  Peptidase family S49 N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       2.7   9.9e+03      69      75 ..      26      32 ..      16      48 .. 0.57
   2 ?    5.5   0.1    0.0047        17       8      68 ..      81     143 ..      76     156 .. 0.82
   3 ?    4.7   2.5    0.0079        28      47      98 ..     154     203 ..     143     211 .. 0.60

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 2.7
  Peptidase_S49_N 69 aaekkek 75
                     a++k++k
       EPX72529.1 26 AQAKEHK 32
                     2222222 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.0047
  Peptidase_S49_N   8 lFlaklvtlvvailvvvvlivalaakkkkekgele..vtkLneeykelkeeleealldeeelk 68 
                       Fl++++++ va  ++++    +++k+k+++++++  +  L++e  +++  le+++l+++ + 
       EPX72529.1  81 NFLSETFVFTVAGGAILFETWRVRRKEKNRRDNITeaIFGLQQEIIRINGILEKQMLEKKVKG 143
                      699**************9999*****9999999854489999999999999999999877543 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.0079
  Peptidase_S49_N  47 neeykelkeeleealldeeelkaaekkekkeekeekkaekkkakeeeekkrv 98 
                      +e+++el++ +++   + ++l ++ek+e ke+k++++++  +++++++++++
       EPX72529.1 154 DEDFEELHKVMHAVEQELHTLSSKEKEESKERKNDDSNQ--DSSNSSSSPTL 203
                      455666666666665555666666666666666665555..33334455555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (236 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2284  (0.127391); expected 358.6 (0.02)
Passed bias filter:                      815  (0.0454571); expected 358.6 (0.02)
Passed Vit filter:                       122  (0.00680462); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.69u 0.36s 00:00:01.04 Elapsed: 00:00:00.56
# Mc/sec: 1271.39
//
Query:       EPX72530.1  [L=580]
Description: ubiquitin carboxy terminal hydrolase Ubp9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.5e-54  182.9   1.5    7.5e-54  182.9   1.5    2.3  2  UCH            Ubiquitin carboxyl-terminal hydrolase
    1.6e-23   83.8  11.5    1.3e-22   80.9   3.9    2.9  3  UCH_1          Ubiquitin carboxyl-terminal hydrolase
    6.8e-05   22.5   4.2      0.011   15.3   4.5    3.0  2  Peptidase_C98  Ubiquitin-specific peptidase-like, SUMO isopep


Domain annotation for each model (and alignments):
>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  182.9   1.5   1.3e-57   7.5e-54       1     257 []      41     423 ..      41     423 .. 0.84
   2 ?    0.7   0.3      0.05     3e+02     164     194 ..     482     513 ..     479     542 .. 0.84

  Alignments for each domain:
  == domain 1  score: 182.9 bits;  conditional E-value: 1.3e-57
                 -EES-SSSTHHHHHHHHHHHTSHHHHHHHHTCHHCCSSTCCCCC....................................................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....................................................... RF
         UCH   1 tGlsNlGntCymnsvlQcLfsipelrdyllsleevkkesrnkke....................................................... 44 
                 +Gl+N GntCy++svl +L++i+++rd l+   +  +++ n k+                                                       
  EPX72530.1  41 FGLTNYGNTCYVSSVLVSLYHIKPFRDSLNA-FPIPSVPPNCKSvcvksngsdasgssswysssrkksndskkqpspanlngcgcvditmagiengskh 138
                 69*************************9999.5777777777776677777777777777777766666666666666666666666666666666665 PP

                 ...-.TT.TTS.TTH............HHHHHHHHHHHHH..SH-CCEE--HHHHHHHHHHSGGGTSSSTCEHHHHHHHHHHHHHHHHCCHCCCHHHHH CS
                 ...xxxxxxxxxxxx............xxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH  45 ...lnesnplgkkge............lakalkdlfkell..kskskavsPkklkktlsklaksfsgykqqDaqEflaflLdqlhedlnrevaeekwkk 126
                    +          +            ++++lkdl++ +   + +    sP++++++l++ ++sf++ +qqDa+Efl+flL+++ e l++     + ++
  EPX72530.1 139 qiqV----------NntsyttygmeenVYTSLKDLYACVSscECRYGVCSPERFVQILRRDNESFRSTRQQDAHEFLNFLLNSITEILDE----YHANH 223
                 5441..........0444444444444999999999888898778899****************************************99....33455 PP

                 HCCCTTSHHHHHH-EEEEE..............................................................EEEEEEB-SEEEEEEESE CS
                 xxxxxxxxxxxxxxxxxxx..............................................................xxxxxxxxxxxxxxxxxx RF
         UCH 127 hlkrndslitdlfegqlks..............................................................klklkrlPeiLiihlkRf 163
                  +  ++ +i++lfeg+l+s                                                              ++k+k+lP+iL +hlkRf
  EPX72530.1 224 PEIPHSRWIHSLFEGTLTSetkcltcenitsrdesfldlsidieeyssvtsclrsfsasemlcaknkfhcdacknlqeaekRMKIKKLPKILALHLKRF 322
                 55667789******************************************************************************************* PP

                 EETEE...EEE--SEEB--SEEE-GGGBSS-BTTS-TCS-BEEEEEEEEEES.CTTSEEEEEEEECTTTTEEEEEETTEEEEE-HH..CCCTT...... CS
                 xxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxx...... RF
         UCH 164 synss...ksKlntkvefpeeldlssylaeekkkkteekkkYeLiavvvHsG.slssGHYvayiknekngkWykydDetvkevkee..eevls...... 250
                 +yn++    +Kl ++v f  e+ l ++++++++ +    k Y+L+a++vH G ++++GHYv++++ ++++ W+ +dDe+v++v+e+  +          
  EPX72530.1 323 KYNETleaHDKLFHTVVFTNEMRLFNTTDDNEDAE----KLYSLSAIIVHVGgGSHHGHYVSIVR-TRSSGWVLFDDEKVTPVNESylQ---Rffgdqp 413
                 ***9999**************99998766444443....45************************.66778*************87550...3555555 PP

                 ...CEEEEEE CS
                 ...xxxxxxx RF
         UCH 251 ...sayiLfY 257
                    +ay+LfY
  EPX72530.1 414 gqaTAYVLFY 423
                 668******* PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.05
                 EETEE.EEE--SEEB--SEEE-GGGBSS-BTT CS
                 xxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH 164 synss.ksKlntkvefpeeldlssylaeekkk 194
                 sy+s+ ++K ++ + fp + d+ss +++e + 
  EPX72530.1 482 SYSSQySQKADKDFHFPFSSDMSSSMESERNH 513
                 56666799***************988766654 PP

>> UCH_1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4   0.1   0.00099       5.9       2      28 ..      42      68 ..      41      74 .. 0.91
   2 !   80.9   3.9   2.1e-26   1.3e-22      96     320 .]     191     397 ..     102     397 .. 0.76
   3 ?    0.2   0.1     0.076   4.5e+02     163     210 ..     485     530 ..     400     571 .. 0.72

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.00099
                xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1  2 GLEnhivnsYlNslLQvlyfipplrnl 28
                GL n  +++Y+ s+L  ly+i+p+r  
  EPX72530.1 42 GLTNYGNTCYVSSVLVSLYHIKPFRDS 68
                999*********************954 PP

  == domain 2  score: 80.9 bits;  conditional E-value: 2.1e-26
                 xxxxxxxxx....xxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1  96 islssliqs....fnrflldqlekelketkkns..seeesaieqllgtkaettirclkCgseksrksstlvldlkyPkpsnekkeakvtfasilkssle 188
                 +s++s  q+    f +fll+ + + l e + n+   +++  i++l++ +++++++cl+C++ +sr++s+l l++          e+++++ s+l+s+  
  EPX72530.1 191 ESFRSTRQQdaheFLNFLLNSITEILDEYHANHpeIPHSRWIHSLFEGTLTSETKCLTCENITSRDESFLDLSIDI--------EEYSSVTSCLRSFSA 281
                 33333334223449999999999988887766666778888******************************98844........355677777777776 PP

                 x...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 189 r...ekttrawCekCkryqpteqrktvknlPpvLalnakleeeeelelwkt......knwlpleiklsldedknleeklkeerekakaekeikvYeLqs 278
                 +     +++  C+ Ck+ q  e+r ++k+lP++Lal++k+++ +  e +++      + ++ +e++l +              +++++e+  k Y+L +
  EPX72530.1 282 SemlCAKNKFHCDACKNLQEAEKRMKIKKLPKILALHLKRFKYN--ETLEAhdklfhTVVFTNEMRLFN--------------TTDDNEDAEKLYSLSA 364
                 63334689*******************************99544..23333111332355555555543..............3344567789****** PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 279 vvvhigdskesghLvslvkvaekelerdppesqWylFNDflV 320
                 ++vh+g ++++gh+vs+v+            s W+lF+D +V
  EPX72530.1 365 IIVHVGGGSHHGHYVSIVRTR---------SSGWVLFDDEKV 397
                 ******9999*********63.........369******766 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.076
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 163 lkyPkpsnekkeakvtfasilksslerekttrawCekCkryqpteqrk 210
                  +y  +++  k+ +  f+s + ss+e+e+++    e   ++   e+r+
  EPX72530.1 485 SQY--SQKADKDFHFPFSSDMSSSMESERNHLKSTEASPKFLKRESRS 530
                 122..4444777888889999999999888766666666665555555 PP

>> Peptidase_C98  Ubiquitin-specific peptidase-like, SUMO isopeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0     0.096   5.7e+02       5      30 ..      44      69 ..      42     107 .. 0.91
   2 !   15.3   4.5   1.8e-06     0.011     118     212 ..     229     335 ..     226     408 .. 0.58

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.096
  Peptidase_C98  5 knkenlCWLDsllvalvhletlkkal 30
                   +n  n C++ s+lv l h++ ++++l
     EPX72530.1 44 TNYGNTCYVSSVLVSLYHIKPFRDSL 69
                   58889***************999876 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 1.8e-06
  Peptidase_C98 118 dslaeklfkssfswefeCseCgvkkker..v...e...ktlttftnvvpdwh...plnAvhlapCnkCkk.keqrrkmvlekvpsvlmlHFveGLp 201
                     +++++lf+ +++ e +C +C++ +++   +   +   ++ ++ t+ +  ++   +l A +   C++Ck+ +e +++m+++k+p++l+lH      
     EPX72530.1 229 SRWIHSLFEGTLTSETKCLTCENITSRDesFldlSidiEEYSSVTSCLRSFSaseMLCAKNKFHCDACKNlQEAEKRMKIKKLPKILALHLKRFKY 324
                    579999***************9765543112111211133456666667775222688999999****984566899*************754444 PP

  Peptidase_C98 202 hndlekysfef 212
                    ++ le+++  f
     EPX72530.1 325 NETLEAHDKLF 335
                    43343333222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (580 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       809  (0.0451224); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.27s 00:00:00.92 Elapsed: 00:00:00.51
# Mc/sec: 3431.82
//
Query:       EPX72531.1  [L=351]
Description: ARS-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-49  167.8   0.3    3.1e-49  167.0   0.3    1.4  1  DDE_1     DDE superfamily endonuclease


Domain annotation for each model (and alignments):
>> DDE_1  DDE superfamily endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  167.0   0.3   1.7e-53   3.1e-49       1     175 []      46     223 ..      46     223 .. 0.98

  Alignments for each domain:
  == domain 1  score: 167.0 bits;  conditional E-value: 1.7e-53
       DDE_1   1 kerltvllcanaagsekLkplvigkaksprafkngektkkkldveyksnrkawltssifeeWLkvfdkrleaekrkilLlldssrshe.tvel...les 95 
                 k+++t++ c+na+g+ekL+++vig+++ prafkn  + +++++v++k +++a +t+si+eeWL++fd r+e  +rk+lLlld++ +h  ++e+   + s
  EPX72531.1  46 KAKVTITACCNASGTEKLPLWVIGYSHLPRAFKNLGIRPENINVNWKFTGRALMTTSIMEEWLRWFDARME--GRKVLLLLDNFIAHGrAIENirlSGS 142
                 689********************************************************************..**************98888789999* PP

       DDE_1  96 elqniklvflPassasllqPldqgvvselKarYrrqllqalleeqnrlskeqkkltlldalkfikkAwn.avsketiksaf 175
                 +l+n+ +++lP+ss +l  P++ g++++lK+ Yr+ +l+ ll  +++  +++ k++l  a+++i  Aw  ++s+  ik +f
  EPX72531.1 143 DLKNTVIIMLPNSSVNLQNPFEIGIIYNLKSLYRISWLKFLLRHKESELNPYYKMNLFIAMQWINEAWHsNLSPTLIKDCF 223
                 ******************************************************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (351 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       480  (0.0267723); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.30s 00:00:00.82 Elapsed: 00:00:00.50
# Mc/sec: 2117.22
//
Query:       EPX72532.1  [L=254]
Description: hypothetical protein SOCG_00295 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
        5.2    6.8   5.5         10    5.8   0.1    2.5  2  TMEM208_SND2  SRP-independent targeting protein 2/TMEM208


Domain annotation for each model (and alignments):
>> TMEM208_SND2  SRP-independent targeting protein 2/TMEM208
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.1   0.00058        10       2      79 ..      47     127 ..      46     130 .. 0.68
   2 ?    3.3   0.2    0.0035        63     100     140 ..     131     171 ..     129     176 .. 0.76

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.00058
  TMEM208_SND2   2 AkksaKkiaee..NkatLknlrlislavnalylllrlll.rsslrprslllylllslpalllyyvlekmgrpkydedgelv 79 
                   A  sa   a+e  N+a    ++ + + +n++ ++++l++    ++ + + l + + +  ++ +y+++++ +  ++++g+++
    EPX72532.1  47 ADGSAQHSAQEstNNAGSDSTYSMWVSANIFLFFASLVYvIPVRTETFWGLSVTCPVSIVVFLYSISQIPKEWFKQTGRVL 127
                   555555555432377777778888888888888888888555555555666667777777888999999999888888876 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.0035
  TMEM208_SND2 100 ltwivqvlsilfgnkfWllylviPayalYklwglilgpaff 140
                   +t i+ vls +  + +    l +P y++Y ++++++g+  +
    EPX72532.1 131 FTQICSVLSNMCVAVICTASLNAPCYSVYYFVKKVIGFEKM 171
                   5777777777777566666899***********99976555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       805  (0.0448993); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 1779.26
//
Query:       EPX72533.1  [L=425]
Description: proline-tRNA ligase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.4e-38  131.0   0.0    6.4e-38  130.5   0.0    1.2  1  tRNA-synt_2b    tRNA synthetase class II core domain (G, H, P
    7.9e-10   38.8   0.0    1.7e-09   37.7   0.0    1.6  1  HGTP_anticodon  Anticodon binding domain
  ------ inclusion threshold ------
       0.97    9.5   3.2          2    8.5   0.0    2.4  2  Zn_Tnp_IS1595   Transposase zinc-ribbon domain


Domain annotation for each model (and alignments):
>> tRNA-synt_2b  tRNA synthetase class II core domain (G, H, P, S and T)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.5   0.0   1.1e-41   6.4e-38       1     177 [.      99     312 ..      99     314 .. 0.96

  Alignments for each domain:
  == domain 1  score: 130.5 bits;  conditional E-value: 1.1e-41
                   EEEEETTSEEEEE-SSSHHHHHHHHHHHEEEB.GGSSEEEEEEEEEEBTTTSTBC.TTTB-SEEEEEEEEEEES.GGGHHHHHHHHHHHHHHHHHHT CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2b   1 YkledrndreyiLkPtneetfvelirdevlrs.krLPlklyqiqtkyRdEksdsr.GLlRvreFhqkdgyvfha.easlddslrdlikaisriferl 94 
                   ++l+dr +re++L Pt+ee +++ i    + s k+LP+++yqi++kyRdE++  r GLlR++eF +kd y f    ++++  +r+++ a++++f+++
    EPX72533.1  99 FRLKDRTERELCLAPTHEEDVTQCIASF-VESqKQLPIRVYQIGRKYRDEAR-PRgGLLRGKEFVMKDLYTFDVdGKQAQGTYRQVLGAYHQFFKAV 193
                   89************************88.766599*****************.777******************7899999**************** PP

                   T.SCEEEEEEGTTSCBTTSEEEEEEEEETT.......................................TSEEEEEEEEEEEETHHHHHTTEEEECT CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......................................xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2b  95 glefraiielmsaksadykdkkefeavses.......................................ltkgieigtiqklgtrlserlgatvlde 152
                   gl+f  +  +++  ++ +k + ef   se                                        l++ ie+g+++ lg+ +s++lga+v + 
    EPX72533.1 194 GLPFSMVNADTG--NIGGKLSHEFHYRSEAgedticvcpscefstnsellketglgkghscpnckdeltLSSSIEVGHAFLLGQAYSSKLGANV-EV 287
                   **********99..589************9***************************************************************9.88 PP

                   TSSEEEEEEEEEEEEHHHHHHHHHH CS
                   xxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2b 153 nnreksvimicaaigveRllsaile 177
                   ++r +  +m+c++ig++R+++ai +
    EPX72533.1 288 DQRLEPLYMGCFGIGISRMIAAIAN 312
                   999999****************975 PP

>> HGTP_anticodon  Anticodon binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.7   0.0   2.8e-13   1.7e-09       1      91 [.     330     420 ..     330     423 .. 0.85

  Alignments for each domain:
  == domain 1  score: 37.7 bits;  conditional E-value: 2.8e-13
                     SEEEEESSSS.HHHHHHHHHHHHHHHHTTTSEEEEES.SSSTHHHHHHHHHHTT-SEEEEE-HHHHHHTEEEEEETTTCEEEEEETTHHHHHH CS
  HGTP_anticodon   1 qvvviplnek.aeeleeyakklaeeLraagirveldd.snesigkkireadllgipfavvvGekelekgtvtvrdrdtreqervsldelvekl 91 
                     +v+v+p ++k   ++e +++ +a+   a++  + l d s+ s+g+k+++a+l+g+pf+++vG +  +++ ++v  r t+ + r++l++l ++l
      EPX72533.1 330 KVLVVPSSMKyMAAAESVYDGVANVVGADN--ILLEDrSQHSFGYKMKDAELIGYPFVIIVGSQFERDNLCEVLVRSTGGRHRLPLQSLHQVL 420
                     7999*****653335566666666666676..68888799**************************9*********************99887 PP

>> Zn_Tnp_IS1595  Transposase zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   1.7      0.16   9.7e+02      20      25 ..     228     233 ..     221     239 .. 0.80
   2 ?    8.5   0.0   0.00033         2       8      27 ..     239     258 ..     235     268 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.16
  Zn_Tnp_IS1595  20 vCPhCg 25 
                    vCP C+
     EPX72533.1 228 VCPSCE 233
                    7****8 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.00033
  Zn_Tnp_IS1595   8 alLealrWpngfvCPhCgsr 27 
                    +lL++   + g+ CP+C+ +
     EPX72533.1 239 ELLKETGLGKGHSCPNCKDE 258
                    79999************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (425 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       603  (0.0336327); expected 358.6 (0.02)
Passed bias filter:                      536  (0.0298957); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 2960.54
//
Query:       EPX72534.1  [L=548]
Description: delta-1-pyrroline-5-carboxylate dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.5e-104  350.1   0.0   1.9e-104  349.8   0.0    1.0  1  Aldedh    Aldehyde dehydrogenase family


Domain annotation for each model (and alignments):
>> Aldedh  Aldehyde dehydrogenase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  349.8   0.0    1e-108  1.9e-104      10     459 ..      61     529 ..      53     532 .. 0.91

  Alignments for each domain:
  == domain 1  score: 349.8 bits;  conditional E-value: 1e-108
                 EEEETT.TCEEEEEEE-B-HHHHHHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHH.HTHHHHHHHHHHHH---HHHHHH.HHHHHHHHHHHHHHHHH CS
      Aldedh  10 evinPa.tgeviakvpaataedvdaavaaAkeafkawaklpaeeRaeiLrkaadlle.erkeelaeletletGkplaeara.eveeaidvlryyaelae 105
                 e  +P+ +++v+a++++a+++dv+aa+++A ea+k+w++l++++Ra+++ kaa+l+  + + +l+++ ++ +Gk++++a+    +e++d+lr+ +++a+
  EPX72534.1  61 EQRCPFdHKKVVARYHRASPADVQAAIESALEAKKEWENLSFTDRAAVFLKAAHLIStKYRYKLMAATMIGQGKNIWQAEIdAAMEIVDFLRFDCKYAS 159
                 67789988999*********************************************956799*******************7778************** PP

                 HHSEEEEEE.CTTEEEEEEEEE-.SEEEEEE-SSSCCHHHHHHHHHHHHTT-EEEEEE-TTSHHHHHHHHHHHHHTTS-TTSEEE--SSTCCHHHHHHH CS
      Aldedh 106 klegevlps.segklalvrrePl.GvvgaItPWNfPlllaawklapalaaGNtvvlKPaeetplsalllaelfeeaglPkgvlnvvtgsgsevgealve 202
                 +l+    p  s+g  + + ++Pl G+v aItP+Nf ++    + a+ l++GN+v++KP++ ++ls  ++  +f eaglP+g+l++v+g+  ev+++  +
  EPX72534.1 160 ELYSVQPPEnSTGVWNRTEYRPLeGFVYAITPFNFTAIGGNLA-AAPLLMGNVVLMKPSDHAVLSNRIVYDIFVEAGLPAGALQFVPGDAIEVSKTCFN 257
                 *99966666579***********************87655555.556777************************************************* PP

                 -TTESEEEEES-HHHHHHHHHHHHCT........TSEEEEEE---EEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHH.HHHHHHHH CS
      Aldedh 203 hpevdkvsftGstevgrkiakaaakn........lkrvtlElGGknplivledaDldkaveaivkgafgnaGQvCiaasrllvqesiyde.fveklvea 292
                 h ++++++ftGst+v r +    ++n        + +++ E+GGkn ++v+ +a + +av ++v++a+ ++GQ+C+a srl+v +s +++ f+++l+++
  EPX72534.1 258 HFDFAALHFTGSTNVFRSLWGIIGENvahgkyrtYPKIVGETGGKNFHLVHHSAQIRSAVVNTVRAAYEYQGQKCSALSRLYVSRSSWEAgFRDQLLQE 356
                 ***************998777766663333444469*****************************************************99******** PP

                 HHT--BS-TTST.T-SB---SSHHHHHHHHHHHHHHHH.TTSEEEE-TTE.SB-SSSTTEE--EEEES-TTTSHHHHS---SSEEEEEEES..SHHHHH CS
      Aldedh 293 akklkvgdplde.dtdvGPliseaqlekvekyveeake.egaklllGgereeaglekgyfvePtvlanvtpdmriaqeEiFGPVlsvikfk..deeeai 387
                 +k+lkvg pl++ ++ vGP+i++ +++k+++++++a +  ++++l Gg   +a++++gyfvePt+l   +p+++i+++E FGP+l+v+ ++  ++ee+ 
  EPX72534.1 357 VKALKVGAPLEDlSNFVGPVIHRGSFDKLKAVLQSAAAdSEVEVLAGG---KADDSTGYFVEPTILLSKNPKHDIFKTEFFGPILAVYVYEdeSLEEVC 452
                 *********666599******************9876516899999**...899************************************944589*** PP

                 HHHHSSS.EESEEEEE-SBHHHHHHHHHHS..-SSEEEESSSST--TTT.SEB--CGGGEES-BSH.HHHHHHTEEE CS
      Aldedh 388 eiaNdte.yGLaagvftkdleraervaerl..eaGnvyiNdsttgaaea.lpfgGvkqSglGregg.kegleeytev 459
                 e+   t+ yGL++++f++d   +++++erl   aGn yiNd++tga+   +pfgG ++Sg+++++g    l++++  
  EPX72534.1 453 ELIDTTNaYGLTGSIFAQDRIVVRKLTERLrnAAGNFYINDKCTGAVVGeQPFGGARASGTNDKAGsGMILSRFVSP 529
                 *9998855**********************777*****************************888846666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (548 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       322  (0.0179597); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 3786.98
//
Query:       EPX72535.1  [L=288]
Description: coatomer epsilon subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.7e-69  233.0   4.2    5.5e-69  232.8   4.2    1.0  1  Coatomer_E    Coatomer epsilon subunit
    0.00035   20.8   3.6       0.18   12.1   0.3    3.6  2  TPR_12        Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.055   13.5   2.5       0.12   12.4   0.3    2.2  2  SRP_TPR_like  Putative TPR-like repeat
      0.092   12.6   0.0        5.6    6.9   0.0    2.2  2  Zn_protease   Putative ATP-dependant zinc protease
        4.2    7.7   8.5          2    8.7   0.3    3.1  4  ANAPC3        Anaphase-promoting complex, cyclosome, subunit 


Domain annotation for each model (and alignments):
>> Coatomer_E  Coatomer epsilon subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  232.8   4.2   1.5e-72   5.5e-69       2     289 ..       9     282 ..       8     283 .. 0.98

  Alignments for each domain:
  == domain 1  score: 232.8 bits;  conditional E-value: 1.5e-72
                 X-TTHHHHHHHHTT-HHHHHHHHHS---SHHHHHHHHHHHHHHHHHTT-HHHHHHHS-TTS-HHHHHHHHHHHHHH-STTHHHHHHHHHHHHHS----S CS
  Coatomer_E   2 sdeLfdvrnefYlGaYqkaineadvaslseeekeerdvylyrsylAlgsaqiviseIkesaatelqAvrllaeylnspsrkeeilaelkeeladseies 100
                 s+eL++vr++fY+G+Y k+  e+d++slse++ e+++ y++r++lAlg++ ++i+   ++++++ +A+ +la+++n+            ++l+++++++
  EPX72535.1   9 SNELYFVRQYFYSGSYDKLS-EIDTSSLSEKGLELTELYMARAKLALGESIESIQGTLTQKSAGGAALLALAGEGNM------------DHLIEQHGDT 94 
                 79***************998.9***********************************8888****************............99******** PP

                 -HHHHHHHHHHHHHTT-HHHHHHHHTT-.-SHHHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHH-T.THHHHHHHHHHHHHHHS CS
  Coatomer_E 101 nevlrllaaivflkegdfddalkllkks.enLeavAlkvqillklhrvdlAekelkkmqdidedatltQLAqawvklavgg.ekiqdAyyifqelseky 197
                 ++ +++l+ai +++++ +d+al ll+ks enLeavAl+v+i l  h++++Ae  + k  d++++++++Q+Aq+wvkla+gg ++++dA+y+++el++  
  EPX72535.1  95 DAAVQTLGAIYLIHKEAYDEALSLLQKSvENLEAVALEVYIRLYQHKLEAAEAAITKSLDWADEEIVLQIAQSWVKLAKGGlDSYNDAFYVYEELNGS- 192
                 **************************************************************************************************. PP

                 ---HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT--HHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHHHHHHHH CS
  Coatomer_E 198 kstplllngkAvvslllgryeeAeslLkeaLdkdakdeetLiNlvvaaqhlgkdaevsernlsqlklshpehklvkdlnekeaeFdrlvlqf 289
                 +s+p +l+ +A+ +l+l r +eA s+L++aL+ ++ +  + +Nl +a++ lg+ a+  +++l +  +s+    l k+ln+k++eFd+l++qf
  EPX72535.1 193 ESNPRVLTCMACSDLCLLRTQEAVSSLRSALEMQSDYTPAAANLKTAVLALGPLAPLDAKQLYE--TSSCGAFLAKQLNQKSQEFDTLATQF 282
                 ***********************************************************99965..67889999****************98 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   0.3   5.1e-05      0.18      40      76 ..      90     127 ..      87     128 .. 0.72
   2 !    6.4   0.0    0.0031        11      22      75 ..     175     226 ..     168     228 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 5.1e-05
      TPR_12  40 dhpltattlrnLgrlyr.algryeeAlelleealaiae 76 
                 +h +t ++ ++Lg +y+   + y+eAl+ll+++++ +e
  EPX72535.1  90 QHGDTDAAVQTLGAIYLiHKEAYDEALSLLQKSVENLE 127
                 56677777788888886466888888888888887765 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0031
      TPR_12  22 AlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealaia 75 
                  l+ ++ a  ++++l G ++   + t  + ++l+ +l r++eA++ l+ al++ 
  EPX72535.1 175 GLDSYNDAFYVYEELNGSESNPRVLTCMACSDLC-LL-RTQEAVSSLRSALEMQ 226
                 5788999999999999999977777777888887.66.9************995 PP

>> SRP_TPR_like  Putative TPR-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1      0.19   6.8e+02      83     104 ..      10      33 ..       4      38 .. 0.70
   2 ?   12.4   0.3   3.3e-05      0.12      20      97 ..     102     185 ..      88     205 .. 0.65

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.19
  SRP_TPR_like  83 qvlYrlgs..yekAYklLskekke 104
                     lY++++  y+  Y+ Ls+ + +
    EPX72535.1  10 NELYFVRQyfYSGSYDKLSEIDTS 33 
                   456777651256779999998865 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 3.3e-05
  SRP_TPR_like  20 kvvaliklekyeeaLkllkkgsalsedvrfEkaYvlYklkkykka.lkilkkveaee...kvkvlksqvlYr...lgsyekAYkl 97 
                    ++ li+ e y+eaL+ll+k  +  e v  E    lY+ +k+++a + i k+++  +    +++ +s v      l+sy++A+ +
    EPX72535.1 102 GAIYLIHKEAYDEALSLLQKSVENLEAVALEVYIRLYQ-HKLEAAeAAITKSLDWADeeiVLQIAQSWVKLAkggLDSYNDAFYV 185
                   5789*****************98889999986555565.5566551445555554441123444445454441223467777544 PP

>> Zn_protease  Putative ATP-dependant zinc protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.0    0.0015       5.6      80     107 ..      42      69 ..      26      79 .. 0.83
   2 ?    3.4   0.0     0.017        62      22      64 ..     145     187 ..     123     193 .. 0.77

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0015
  Zn_protease  80 aekRpViklqlllgpeiekievtLtdRs 107
                   ++ +  +++l+lg+ ie+i++tLt+ s
   EPX72535.1  42 LTELYMARAKLALGESIESIQGTLTQKS 69 
                  566778899***************9876 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.017
  Zn_protease  22 dtgaltsSLsagdiesferdgekwVrfkevrldekkaegvvlE 64 
                  +  a t SL+  d e + +  ++wV++ +  ld+ + + +v E
   EPX72535.1 145 AEAAITKSLDWADEEIVLQIAQSWVKLAKGGLDSYNDAFYVYE 187
                  34699**********************7768888888877777 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1      0.91   3.3e+03      31      71 ..      16      56 ..       6      62 .. 0.60
   2 ?    3.4   0.9     0.025        89      29      58 ..     101     128 ..      84     152 .. 0.54
   3 ?    8.7   0.3   0.00056         2       7      80 ..     140     220 ..     136     222 .. 0.76
   4 ?   -2.8   0.0       2.1   7.5e+03       4      27 ..     235     255 ..     233     273 .. 0.62

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.91
                HHHHHTT-HHHHHHHHHCTSHHHC-H.HHHHHHHHHHHHTT- CS
      ANAPC3 31 lclylngqykrAyellrkaklnsksl.gcrylfAqcllkLkk 71
                  ++ +g y++  e+  ++ l +k l    + +A++ l+L++
  EPX72535.1 16 RQYFYSGSYDKLSEIDTSS-LSEKGLeLTELYMARAKLALGE 56
                5566677777777666666.3444442455556788888765 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.025
                 H.HHHHHHTT-HHHHHHHHHCTSHHHC-HHH CS
      ANAPC3  29 l.AlclylngqykrAyellrkaklnskslgc 58 
                 l A  l + + y++A+ ll+k+    ++l++
  EPX72535.1 101 LgAIYLIHKEAYDEALSLLQKS---VENLEA 128
                 4345555666688888888888...455544 PP

  == domain 3  score: 8.7 bits;  conditional E-value: 0.00056
                 HHHHHHHHHH..HHH--HHHHHHH.HHHHHHTT-.....HHHHHHHHHCTSHHHC-HHHHHHHHHHHHHTT-HHHHHHHH- CS
      ANAPC3   7 nAiflaerlla.aetespedayll.Alclylngq.....ykrAyellrkaklnskslgcrylfAqcllkLkkyeeAiaaLe 80 
                   +  ae + + +  + +e + l  A++  ++ +     y+ A++++++++  +++++++ ++A + l L + +eA++ L 
  EPX72535.1 140 HKLEAAEAAITkSLDWADEEIVLQiAQSWVKLAKggldsYNDAFYVYEELNGSESNPRVLTCMACSDLCLLRTQEAVSSLR 220
                 444445555522446666666664488888888878888***********999***********999999999***99886 PP

  == domain 4  score: -2.8 bits;  conditional E-value: 2.1
                 -HHHHHHHHHHHH.HHH--HHHHH CS
      ANAPC3   4 nyknAiflaerllaaetespeday 27 
                 n+k+A++ + +l    + +++ +y
  EPX72535.1 235 NLKTAVLALGPLA---PLDAKQLY 255
                 5677777777777...33333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       620  (0.0345808); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.29s 00:00:00.82 Elapsed: 00:00:00.48
# Mc/sec: 1807.14
//
Query:       EPX72536.1  [L=405]
Description: G-protein alpha subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.4e-99  333.6   0.2    1.8e-99  333.3   0.2    1.1  1  G-alpha    G-protein alpha subunit
    1.2e-13   50.8   0.1      1e-08   34.8   0.0    2.4  2  Arf        ADP-ribosylation factor family
     0.0031   17.2   0.1     0.0061   16.3   0.1    1.5  1  AAA_29     P-loop containing region of AAA domain
     0.0057   16.0   0.7        2.2    7.6   0.1    2.3  2  Gtr1_RagA  Gtr1/RagA G protein conserved region
     0.0072   16.5   0.0       0.91    9.8   0.0    2.6  2  Roc        Ras of Complex, Roc, domain of DAPkinase
  ------ inclusion threshold ------
       0.11   12.2   0.0       0.16   11.6   0.0    1.2  1  AAA_15     AAA ATPase domain


Domain annotation for each model (and alignments):
>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  333.3   0.2  6.1e-103   1.8e-99       9     354 .]      60     395 ..      52     395 .. 0.91

  Alignments for each domain:
  == domain 1  score: 333.3 bits;  conditional E-value: 6.1e-103
                 XXXXXXXXXXXE..EEEEEEEESTTSSHHHHHHHHHHHCS----HHHHHCCHHHHHHHHHHHHHHHHHHHHHTT.......HHHC-SS-SCCCS-HCHH CS
     G-alpha   9 kslkaerkarkkkrevkllllGqseSGKsTilkqlkllykkgfseeelatwraviqlnivrsiktilealesleselsesfelqelkerldplkkveas 107
                 +s  +++   k+++e+k+lllG+++SGK+Ti+kq++lly +gf++  ++++r +i++ni++s+ ++l+a+e+++ +l     +++ k r   l+k + +
  EPX72536.1  60 AS--NQNGISKNDNEIKVLLLGAGDSGKTTIMKQMRLLYSPGFNQAARRQYRIMIFENIITSVCLLLDAMENSGMSL----LPENEKYRPIILRKHNIQ 152
                 33..33444444669*********************************************************87777....334444444444444444 PP

                 HH..........HHCCHHC-HCHHHHHHHHCCSHHHHHHHCCGCCTT--TTHHHHHCTHHHHCSTT----CHHHHCS-----SEEEEEEECT-TEEEEE CS
     G-alpha 108 liaklssateeeqeiefnpraevgedikaLwndpgiqelyerrnkiklednaeyFlddleritspdYlptddDilkarlktvGisetkfevdsklefri 206
                              ++ f+   +++e+++aL  dp i+   +  ++++l+dn  y+ d+++ri++p+Ylp+d+Dil++r+kt+Gise +f ++  +++r+
  EPX72536.1 153 ------------VNEPFPA--DLYEALRALTLDPKIRTAQNCGTNLSLLDNFYYYQDHIDRIFDPQYLPSDQDILHCRIKTTGISEETFLLN-RHKYRF 236
                 ............5688999..9*******************999*********************************************999.****** PP

                 EEE-SSHHHHHGTCCCTTTECEEEEEEEGGGTT-B-SS-TTSBHHHHHHHHHHCCCC-GGGTTSEEEEEEE-HHHHHHHCCCS-GGGCCTT--...... CS
     G-alpha 207 vdvgGqrserkkWvpffddvdaiiFlvslsefdqvlyedekvnrleeslklFkeicnnkllkntpiiLflnKlDileeKlkkgklskyfpsye...... 299
                 +dvgGqrser+kW+++f++v+a++Flvsl+++dq+l ed++ n+++e+l l+++icn+++++++ +iLflnKlD++++K+ ++++++yfp+y+      
  EPX72536.1 237 FDVGGQRSERRKWIHCFESVTALLFLVSLAGYDQCLVEDNSGNQMQEALLLWDSICNSSWFAESAMILFLNKLDLFKRKVHTSPIQQYFPDYQetpstp 335
                 *********************************************************************************************999999 PP

                 ........H.CCHHHHHHHHHHHHHHCCCCCCESGGSCEEEEEE-TT-HHHHHHHHHHHHHHH CS
     G-alpha 300 ........grkndlesvlkylrnkFeeihkeksnnrrkiythftsatdtkevqkviesvrdti 354
                          ++n ++s + y+  kFe++++     +r++y+hft+atdt  +q+v+ sv+dti
  EPX72536.1 336 tfvqtqcpFSDNAVKSGMYYFYLKFESLNR---IASRNCYCHFTTATDTSLLQRVMVSVQDTI 395
                 9999999966899***************88...89999**********************997 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.1   1.3e-05     0.038      10      35 ..      68      93 ..      61      96 .. 0.87
   2 !   34.8   0.0   3.5e-12     1e-08      43     168 ..     217     353 ..     208     358 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1.3e-05
                T.TTEEEEEEEESTTSSHHHHHHHHH CS
         Arf 10 lkkkelrilllGLDnaGKtTilkklk 35
                ++++e+++lllG   +GKtTi+k+++
  EPX72536.1 68 KNDNEIKVLLLGAGDSGKTTIMKQMR 93
                5689******************9875 PP

  == domain 2  score: 34.8 bits;  conditional E-value: 3.5e-12
                 SSSSSEEEEEEEETTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CT..........THHHHHHHHHHHCTSGCCTTSEEEEEEE-TTSTT.S CS
         Arf  43 vPTigfnveeleiknlkftvwDvGGqeklRplWknYfektdavifvvDsadre..........RleeakeeLkalleeeelkevallvlaNKqDlpe.a 130
                 + T+g   e+   +  k++++DvGGq++ R+ W + fe+++a++f+v  a  +           ++ea    +++ +++  +e a++++ NK Dl +  
  EPX72536.1 217 IKTTGISEETFLLNRHKYRFFDVGGQRSERRKWIHCFESVTALLFLVSLAGYDqclvednsgnQMQEALLLWDSICNSSWFAESAMILFLNKLDLFKrK 315
                 66999999999***********************************965433211111222336777777778899999999************96516 PP

                 S-HHHHHHHTTGGGSSSSSSEEEEEEBTTTTBTHHHHH CS
         Arf 131 lseeelrellgleelkgkrkleiqkcsavkgeglkegl 168
                 ++++ +++    ++ +++++  +q+ +  + + +k+g+
  EPX72536.1 316 VHTSPIQQYFPDYQETPSTPTFVQTQCPFSDNAVKSGM 353
                 77888888888888788888888888888888887776 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.1     2e-06    0.0061      19      59 ..      68     105 ..      54     107 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 2e-06
      AAA_29  19 idlkg.atlltGpsGsGKSTllDAiqalLvpakkvrfNkaan 59 
                  + ++  +ll G+  sGK+T++  ++ lL+++    fN+aa+
  EPX72536.1  68 KNDNEiKVLLLGAGDSGKTTIM-KQMRLLYSPG---FNQAAR 105
                 44455679**************.889999*999...****97 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.1    0.0012       3.6       1      17 [.      74      90 ..      74     103 .. 0.90
   2 !    7.6   0.1   0.00072       2.2      22     165 ..     204     384 ..     197     404 .. 0.63

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0012
   Gtr1_RagA  1 kvLLmGksgsGKtsmrs 17
                kvLL+G + sGKt++ +
  EPX72536.1 74 KVLLLGAGDSGKTTIMK 90
                8*************987 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.00072
   Gtr1_RagA  22 nylardtlrlga...tidveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDve..........sr.eleedletlkeilealr 106
                 +yl+ d   l     t+ ++++++ +l+  +   +D+gGq++   +       + f++v +l++++             s  +++e+l  + +i  + +
  EPX72536.1 204 QYLPSDQDILHCrikTTGISEETF-LLNRHKYRFFDVGGQRSERRK-----WIHCFESVTALLFLVSLAgydqclvednSGnQMQEALLLWDSIC-NSS 295
                 566666655554111444555666.7788899999****9986655.....5899***********99988888885543213444444444433.333 PP

   Gtr1_RagA 107 qyspeakvfvlihKmDliqedereeifeerkeeireeiekleke...............................eiqffaTSiwdesly 165
                  +  e  +  +++K+Dl +++ +++ +++   +++e+ +   +                                ++ ++ T   d sl 
  EPX72536.1 296 WF-AESAMILFLNKLDLFKRKVHTSPIQQYFPDYQETPSTPTFVqtqcpfsdnavksgmyyfylkfeslnriasrNCYCHFTTATDTSLL 384
                 33.455677899******999999888887777777666333332334444455555566666666666666666666666666666665 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0    0.0003      0.91       1      19 [.      74      92 ..      74     120 .. 0.87
   2 ?    4.2   0.0     0.016        48      50     119 ..     226     310 ..     193     311 .. 0.56

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.0003
                EEEEESSTTSSHHHHHHCH CS
         Roc  1 KvvlvGdsgvGKtsllkrf 19
                Kv+l+G + +GKt+++k++
  EPX72536.1 74 KVLLLGAGDSGKTTIMKQM 92
                9***************985 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.016
                 BTTTTCEEEEEEEE-SGGCTT.TT-HHHHCTSCEEEEE....EE.........GHHHHCHHHHHHHHHHH.CSSS-EEEEEE-TT CS
         Roc  50 dkkvkkvklniWDtaGqerfr.slhplylreaalailv....yd.........srssenlkeWlkelkkv.agkspvilvgnkiD 119
                 +  +++ k++++D++Gq   r +  +++ +  al++lv    yd         ++ +e l  W + +++    +s +il  nk+D
  EPX72536.1 226 TFLLNRHKYRFFDVGGQRSERrKWIHCFESVTALLFLVslagYDqclvednsgNQMQEALLLWDSICNSSwFAESAMILFLNKLD 310
                 3345667899******976552688999998888887744444555553221111122333466666554245667777778877 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   5.4e-05      0.16      25     126 ..      74     176 ..      65     236 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 5.4e-05
      AAA_15  25 ltvliGkNnsGKSsilealdlFlnnkekknkkvikiekedleifeniseskdikIdvefaek......ekakeyektlkskekkkadlllkkkesdlkk 117
                   +l G+ +sGK++i++ + l+ +      ++     +  + ifeni +s ++ +d  +  +      e++k++  +l++ +++ ++    +++++l  
  EPX72536.1  74 KVLLLGAGDSGKTTIMKQMRLLYSPG----FNQAARRQYRIMIFENIITSVCLLLDAMEN-SgmsllpENEKYRPIILRKHNIQVNEPFPADLYEALRA 167
                 67899*******************88....556777788888999999999999999883.23666777788888888888888888777777777777 PP

      AAA_15 118 tikdkklkl 126
                 +  d k+  
  EPX72536.1 168 LTLDPKIRT 176
                 776666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (405 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       537  (0.0299515); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 2883.16
//
Query:       EPX72537.1  [L=357]
Description: vesicle coat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.6e-47  159.4   0.8    1.2e-46  158.9   0.0    1.6  2  Folliculin  Vesicle coat protein involved in Golgi to plasma 
  ------ inclusion threshold ------
       0.14   11.9   0.0       0.22   11.2   0.0    1.3  1  PAP2_3      PAP2 superfamily


Domain annotation for each model (and alignments):
>> Folliculin  Vesicle coat protein involved in Golgi to plasma membrane transport
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.2      0.41   3.7e+03     125     135 ..      67      79 ..      35     104 .. 0.48
   2 !  158.9   0.0   1.3e-50   1.2e-46       2     183 ..     141     348 ..     140     350 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.41
  Folliculin 125 a..lkadgsglsr 135
                 +  +k+d++  ++
  EPX72537.1  67 EslFKSDTEDSNQ 79 
                 1222222222111 PP

  == domain 2  score: 158.9 bits;  conditional E-value: 1.3e-50
  Folliculin   2 sYvStqePlsperysllrqaclrsLScEtlpr.....asggpifFgDeaaGytlayiFrlkDvkARGkkRvYalialstdkerlllkawsfiveafekl 95 
                  Y+S+q+P +++rys+lr++++r+LScE+ ++     + ++p+fFgD+++Gy++a+ F+l+D++ARG  R+Ya++als+++ + l++++sfive+f+++
  EPX72537.1 141 VYISSQYPRNQNRYSVLRRLMVRCLSCEYSVSsdiseSMSNPLFFGDQENGYVIAQSFSLHDSHARGGLRRYAFVALSKSD-HELINRYSFIVEKFSQM 238
                 7******************************99***999******************************************.***************** PP

  Folliculin  96 aaeiqalaeaelereskeeeassaassssa........................lkadgsglsrregssfslskekylrrsksklkarsLaelvgdedi 170
                 ++ ++ ++ ++  +    ++++ + +   +                        +++++++++++   s++l + ++lrr++   + r+La+++  + +
  EPX72537.1 239 VQFLRLSSTKTTANYPMYHKKTPSVNG--TfasptsnasslssssnvpgqtpygMSPSNGTAPSTYLLSQRLPSFSFLRRRDGVGEGRNLADITCWDGV 335
                 *****9999888655554443333332..134688899***************988888888888888999999************************* PP

  Folliculin 171 FvelHawfvwlLk 183
                 F+ +H++f+w+L+
  EPX72537.1 336 FIGIHSSFSWILD 348
                 ************7 PP

>> PAP2_3  PAP2 superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   2.5e-05      0.22      58     102 ..     101     149 ..      93     171 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 2.5e-05
      PAP2_3  58 rlreflttlllatllgllvyalfPaagPrll....eeagfvdtvaaasl 102
                 +   ++ + ++++ ++l + +++P ++Prl+    +++++v + +++  
  EPX72537.1 101 QSPVARKSACVTCSIVLPCEYVLPDVPPRLIslstKNPDIVYISSQYPR 149
                 5667999************************976666666666665544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (357 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       578  (0.0322383); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.23s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2525.87
//
Query:       EPX72538.1  [L=241]
Description: SIN component Cdc14 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.8e-38  131.7   8.6    4.6e-30  104.7   3.2    3.0  3  CDC14           Cell division control protein 14, SIN compone
  ------ inclusion threshold ------
      0.099   13.1   0.4        0.5   10.8   0.4    2.1  1  Telomere_reg-2  Telomere length regulation protein


Domain annotation for each model (and alignments):
>> CDC14  Cell division control protein 14, SIN component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0   2.8e-05      0.25       1      35 [.       1      35 [.       1      47 [. 0.90
   2 !  104.7   3.2   5.2e-34   4.6e-30      76     215 ..      49     196 ..      35     202 .. 0.89
   3 !   19.3   0.1   5.6e-08   0.00051     254     284 .]     203     233 ..     196     233 .. 0.93

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 2.8e-05
       CDC14  1 meslLslafdnlsskdkskirkglrqvegLLaqic 35
                me+lL +a  +l  ++++ ir glrq+e++L +i 
  EPX72538.1  1 MEDLLINARHHLCMRNPKFIRIGLRQLESILYHIA 35
                99*****************************9986 PP

  == domain 2  score: 104.7 bits;  conditional E-value: 5.2e-34
       CDC14  76 FfkLQegfewnvalrlistldrllgkgsdgqndl........lilsaldllqGlLLLHppSrsLfsreikmnllLdllepancpaiqsatlltLvtaLl 166
                 F+kLQ++  +n ++  i  ld ll+ +++ +           l+  +l+++ Gl+L+Hp S+  f+ +++++l++++lep +  ++q+a+l  Lv++++
  EPX72538.1  49 FLKLQDSHLYNSVVPCIYALDSLLDYQQNDEAYFedyvfiqrLMDDLLHVIEGLVLIHPMSQLFFEDKTTLHLFIQILEPSQIRNLQVAALKALVCIMV 147
                 9***********************99887443334445555455568899************************************************* PP

       CDC14 167 dtpqNtRtFEeldGlltvtsLfksrstsrevklklvEFLyfYLmpEtps 215
                 d p  +R FE++ Gl  +  Lfk+++ts++ +l+++EF+yfYL pE   
  EPX72538.1 148 DRPLVVRLFESIGGLHHICMLFKHKQTSQDTRLQILEFFYFYLSPEPYN 196
                 **********************************************755 PP

  == domain 3  score: 19.3 bits;  conditional E-value: 5.6e-08
       CDC14 254 tksteeKqellgrylsnveeLvedLreskpf 284
                  k+  eKq +l++ylsnv++L +dL++ kpf
  EPX72538.1 203 RKTRAEKQVYLSKYLSNVHDLRKDLDTFKPF 233
                 58999*************************8 PP

>> Telomere_reg-2  Telomere length regulation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.4   5.6e-05       0.5      46     104 ..     119     185 ..      46     187 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 5.6e-05
  Telomere_reg-2  46 ataLltledkfdienfeelrlnalvallvatpekvae........ylteeffsnqyslqqRidiLsv 104
                     ++ ++++ +  +i n +   l+alv ++v +p  v          +++  f  +q s+  R++iL+ 
      EPX72538.1 119 LHLFIQILEPSQIRNLQVAALKALVCIMVDRPLVVRLfesigglhHICMLFKHKQTSQDTRLQILEF 185
                     5677888888899*******************97766999****9********************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (241 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 1694.50
//
Query:       EPX72539.1  [L=824]
Description: phosphoketolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     2e-164  546.7   0.0   2.6e-164  546.3   0.0    1.1  1  XFP_N         XFP N-terminal domain
    2.1e-72  242.8   0.1    3.9e-72  242.0   0.1    1.5  1  XFP_C         XFP C-terminal domain
    4.3e-69  231.8   0.0    6.8e-69  231.1   0.0    1.3  1  XFP           D-xylulose 5-phosphate/D-fructose 6-phosphate p
  ------ inclusion threshold ------
      0.065   13.0   0.1       0.48   10.2   0.0    2.3  2  TPP_enzyme_C  Thiamine pyrophosphate enzyme, C-terminal TPP b


Domain annotation for each model (and alignments):
>> XFP_N  XFP N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  546.3   0.0  5.9e-168  2.6e-164       1     363 [.      50     410 ..      50     411 .. 0.99

  Alignments for each domain:
  == domain 1  score: 546.3 bits;  conditional E-value: 5.9e-168
       XFP_N   1 kiseeelkkldkywraanylavgliylkdnpllreplkeedvkarllGhwGtvpGlsflyahlnriikkydqnmlyvvGPGhGgpalvaasylegsyse 99 
                 k+s+ee++ +d+++ra++yla +li+l ++ + +++l+e+dvk+rllGhwGt+pGls+ y+h+nrii+kyd++m++vvGPGhG+pa+++a++le+s+++
  EPX72539.1  50 KVSDEEVAAVDRFQRACDYLACSLIFLAKDIYRGGDLEEDDVKTRLLGHWGTCPGLSIAYSHCNRIINKYDLDMIFVVGPGHGAPAVLGALFLEDSLGP 148
                 689************************************************************************************************ PP

       XFP_N 100 lypeiskdeeGlkklfkqfsfPGGipshvaaetPGsiheGGelGyalshayGavldnPdlivacvvGdGeaetGPlatswhsnkflnPaedGavlPile 198
                 +yp++++++eGlk+l+ +fs+PGG+pshv+ae PGsiheGGelGy+ls++yGav d+Pdliv+cvvGdGeae+GPla sw+++kfl+Pae+Gav+Pil 
  EPX72539.1 149 FYPQYQFTREGLKNLISTFSLPGGFPSHVNAECPGSIHEGGELGYSLSVSYGAVQDKPDLIVTCVVGDGEAESGPLAGSWQTHKFLDPAESGAVIPILS 247
                 *************************************************************************************************** PP

       XFP_N 199 lnGykisnptilarisdeelkklfeGlGyepafvededteslhkllaevldkaveeihdiqkearsneeasrPkwPmiilrtPkGwtgPkyvdGkkveg 297
                 lnGykis++ti+++++d el +lf+G+Gy++a+v+   t ++++ +a+ +d+ave i+diq++ar+++e ++P+wPmiilr+PkG+++Pk ++G+++eg
  EPX72539.1 248 LNGYKISERTIYGCMDDLELLALFSGFGYQVAIVNY--TSEYNREMAAAMDWAVETIKDIQHRARVKRELIKPRWPMIILRSPKGKGCPKTLNGTFLEG 344
                 **********************************99..899********************************************************** PP

       XFP_N 298 sfrahqvPlalarentaklellkewlksykpeelfdedgslkeelkelaPkgekrlaanpeanggl 363
                 ++ ahqvPl+lar++ +++++lk+wl+sy+ ++++de+g ++++++e++P++ kr++++pe+++++
  EPX72539.1 345 TYHAHQVPLKLARTDGTQRKMLKDWLSSYRFDDFLDEEGLPTKGIREYIPRASKRMGQRPETYNSY 410
                 ***************************************************************986 PP

>> XFP_C  XFP C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  242.0   0.1   8.7e-76   3.9e-72       1     200 [.     615     815 ..     615     817 .. 0.96

  Alignments for each domain:
  == domain 1  score: 242.0 bits;  conditional E-value: 8.7e-76
       XFP_C   1 KqpepqylsldeAeehckkGasiwewastdegeepdvvlagiGdeptlEvlaAvellreelpelkvrvvnvvdLmklqeesehphglsdeefdelFtkd 99 
                 K+p+p yls++eAe+hc++Gas+w+++std+g +pdvvl+giG+e+++Ev++A+e+l + +p+l+vrvvnv+dLm l+  s hphg+++ efd+lFt++
  EPX72539.1 615 KNPQPSYLSIEEAEAHCTAGASVWKFCSTDNGLNPDVVLVGIGNEIMFEVVKAAEMLANDIPSLRVRVVNVTDLMSLS--SMHPHGMTQLEFDSLFTTN 711
                 89***************************************************************************5..67***************** PP

       XFP_C 100 kpvifnfHgYptlikrLlykrknherlhvrgYkeeGtttTpfdmlvlnevdRfhlaidai...krveklkkkaaelaeklkekleehkkyireegeDlp 195
                 ++v++n+HgY   ik+Ll++r + +r++v+gY+eeGtttTpf m+++n+++R+++a +a+    +++ ++ + ++l +++++kl+e+k+y+ ++++D+p
  EPX72539.1 712 RHVHVNYHGYVMDIKSLLFDRIEPTRITVNGYQEEGTTTTPFTMMMVNNTSRYDVARAALqhsIHNPYVAVNCHNLSSNYSHKLDEIKEYVFKYKDDPP 810
                 ************************************************************44334667899**************************** PP

       XFP_C 196 evedw 200
                 e++d+
  EPX72539.1 811 ETYDV 815
                 *9986 PP

>> XFP  D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  231.1   0.0   1.5e-72   6.8e-69       2     176 .]     434     604 ..     433     604 .. 0.97

  Alignments for each domain:
  == domain 1  score: 231.1 bits;  conditional E-value: 1.5e-72
         XFP   2 algkylrdvlkknpenfrifgPDetaSnrLnavfevtkrqwqeeieeedeelaaeGrvievlsEhlcegllegYlltGrhglfasyEaflrivdsmvnq 100
                 ++g+yl ++l++n++++rif+PDe++Sn+L+av++ t+r++q+    + + +a+ Grv evlsEh+c+gl++gY+ltGr+++f+syEaf++iv sm+ q
  EPX72539.1 434 VVGNYLGELLRENDTTLRIFSPDELESNKLDAVLKYTDRTMQT----DPTLMAKGGRVTEVLSEHICQGLMQGYTLTGRTAIFPSYEAFMTIVVSMLIQ 528
                 689************************************9777....5667788********************************************* PP

         XFP 101 hakflkkakelewrkdvaslnllltstvwrqdhNgfsHqdpglidavlnkkaevvrvylPpDaNtllsvldhclrs 176
                 ++kf+k+  el+w+ ++ sln++++st+ rq+hNg+sHq p +i+++l+ k+ ++rvy+P+DaN++ls++++c+rs
  EPX72539.1 529 YSKFIKMGLELPWHGKFGSLNYVTSSTWARQEHNGYSHQSPRFITTMLSFKPGISRVYFPADANCFLSTMARCMRS 604
                 **************************************************************************97 PP

>> TPP_enzyme_C  Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   0.00011      0.48      28      57 ..     189     218 ..     175     222 .. 0.89
   2 ?   -0.8   0.0      0.27   1.2e+03     111     144 ..     265     300 ..     252     304 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00011
                   S-TTTHHHHHHHHHHHSTTSEEEEEEEHHH CS
  TPP_enzyme_C  28 gtmGyglpaAiGaklakpdrevvaivGDGg 57 
                   g +Gy+l+++ Ga   kpd  v ++vGDG 
    EPX72539.1 189 GELGYSLSVSYGAVQDKPDLIVTCVVGDGE 218
                   789************9*************6 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.27
                   --HHHHHHHTTSEEE..EESSH.HHHHHHHHHHHHC CS
  TPP_enzyme_C 111 vdfaklaealGakga..rvekadveeleealkeale 144
                   + + +l  ++G ++a   +++++  e+++a+++a+e
    EPX72539.1 265 LELLALFSGFGYQVAivNYTSEYNREMAAAMDWAVE 300
                   567889999999977687778888999999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (824 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       521  (0.0290591); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.66u 0.26s 00:00:00.92 Elapsed: 00:00:00.43
# Mc/sec: 5692.03
//
Query:       EPX72540.1  [L=90]
Description: hypothetical protein SOCG_00303 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-19   68.7  10.0    4.5e-19   68.5  10.0    1.0  1  COX6B     Cytochrome oxidase c subunit VIb
  ------ inclusion threshold ------
       0.13   12.6   4.0        1.2    9.4   4.1    2.0  2  Pet191_N  Cytochrome c oxidase assembly protein PET191


Domain annotation for each model (and alignments):
>> COX6B  Cytochrome oxidase c subunit VIb
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.5  10.0     5e-23   4.5e-19       5      75 ..       9      79 ..       5      80 .. 0.95

  Alignments for each domain:
  == domain 1  score: 68.5 bits;  conditional E-value: 5e-23
       COX6B  5 nknqrkaCwearddyfkCldkkgeekaekkeeqdekkCkaekkeyesnCaksWveyfkekrvlekreerll 75
                +++ r++Cweard yf+Cl+k+++ ++ k+++ + + C+ ek+++esnC +sWv+yf + rv ++++++ +
  EPX72540.1  9 KRSAREKCWEARDFYFDCLNKNDILDPLKDNDRASQVCSSEKTNFESNCIQSWVNYFCKFRVQQHKQQEAI 79
                5899*************************************************************999865 PP

>> Pet191_N  Cytochrome c oxidase assembly protein PET191
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.2   0.00078         7      37      59 ..      10      34 ..       5      39 .. 0.81
   2 ?    9.4   4.1   0.00014       1.2       3      54 ..      15      67 ..      13      77 .. 0.81

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.00078
    Pet191_N 37 eelpeeCkqlrkayfeC..krgllD 59
                ++  e+C ++r+ yf+C  k+++lD
  EPX72540.1 10 RSAREKCWEARDFYFDClnKNDILD 34
                567899***********77777777 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00014
    Pet191_N  3 sCkdlrealaeClqksdCv...kkerktpkeClkekaeelpeeCkqlrkayfeCk 54
                +C + r+   +Cl+k d +   k++++  + C +ek ++++++C q   +yf Ck
  EPX72540.1 15 KCWEARDFYFDCLNKNDILdplKDNDRASQVCSSEK-TNFESNCIQSWVNYF-CK 67
                7999999999*****986422277888888899988.9***********998.76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       776  (0.0432818); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.31s 00:00:00.82 Elapsed: 00:00:00.53
# Mc/sec: 512.94
//
Query:       EPX72541.1  [L=343]
Description: cytoskeletal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-41  140.7   4.9    3.2e-41  140.7   4.9    1.8  2  DUF2013   Protein of unknown function (DUF2013)


Domain annotation for each model (and alignments):
>> DUF2013  Protein of unknown function (DUF2013)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.3      0.23   4.1e+03      83      92 ..      54      63 ..       6      85 .. 0.56
   2 !  140.7   4.9   1.8e-45   3.2e-41       7     138 .]     162     296 ..     156     296 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.23
     DUF2013 83 lfYtnDlkVL 92
                ++++ D++++
  EPX72541.1 54 FLFMEDIHII 63
                3333333333 PP

  == domain 2  score: 140.7 bits;  conditional E-value: 1.8e-45
     DUF2013   7 sviklllalneqfmvasles...kelenkvlkvlsekksssktfgenlilllNReedlvlqllilklLyllfttsetaelfYtnDlkVLvDviiRelsd 102
                 +++ lll+lneqfm+ +l+s    e++n v+++lse+k ++  + e l+++lNRe+d+ +++lilk Lyllftt++t+e+fYtnDl+VL+D++iRe++d
  EPX72541.1 162 MCMLLLLSLNEQFMLVKLAStgvVEIQNGVMNLLSESKVDTGVYCEGLVFILNRERDPRTRMLILKQLYLLFTTPKTYEVFYTNDLNVLIDILIREIND 260
                 57889************9999999*************************************************************************** PP

     DUF2013 103 lsdeeeeklrhtyLrvlhpllkntqlsee.kykreel 138
                 + ++e  klr +yL+vl pll+ntq++   +yk++++
  EPX72541.1 261 I-PNELAKLRYAYLQVLLPLLQNTQVRLPpHYKTKHI 296
                 *.8************************9989998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       393  (0.0219198); expected 358.6 (0.02)
Passed bias filter:                      278  (0.0155056); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.29s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 2295.88
//
Query:       EPX72542.1  [L=146]
Description: G10 protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-64  216.4   2.7    1.5e-64  216.2   2.7    1.0  1  G10       G10 protein


Domain annotation for each model (and alignments):
>> G10  G10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  216.2   2.7   8.3e-69   1.5e-64       1     146 []       1     144 [.       1     144 [. 0.96

  Alignments for each domain:
  == domain 1  score: 216.2 bits;  conditional E-value: 8.3e-69
         G10   1 mpkirtkkkkkppegfekiedtleeleaklreaekeskeskkkeeslWkiarinhersryvyelyykrkaiskelydyllkekyadaeLiakWkkaGYe 99 
                 mp+irt+++k+ppegfe+ie+tl e+++++r++e+++  + +k+esl +i++++h+rsryvy+lyykr+ais ely++llk++yada+LiakWkk+GYe
  EPX72542.1   1 MPRIRTSRTKRPPEGFEEIEPTLLEFQERMRQVENTTG-KGSKSESLAPIFQLHHQRSRYVYDLYYKREAISSELYNWLLKQNYADANLIAKWKKPGYE 98 
                 8********************************99875.5567899***************************************************** PP

         G10 100 kLcclrciqtkeanegstciCRvPkakleeekkfvecvkcGCrgcas 146
                 kLcclrciqt e+++gstciCRvPkakl  +++ + cv+cGCrgcas
  EPX72542.1  99 KLCCLRCIQTAESKFGSTCICRVPKAKL-GKDAPSTCVHCGCRGCAS 144
                 ****************************.555569**********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       645  (0.0359752); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.28s 00:00:00.72 Elapsed: 00:00:00.45
# Mc/sec: 982.33
//
Query:       EPX72543.1  [L=982]
Description: MutS protein 2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.4e-82  274.1   1.0    6.4e-82  274.1   1.0    2.1  3  MutS_V    MutS domain V
    1.2e-33  117.0   1.4    1.2e-33  117.0   1.4    2.0  2  MutS_III  MutS domain III
    5.2e-21   74.8   1.6    1.2e-20   73.6   1.6    1.7  1  MutS_IV   MutS family domain IV
    1.1e-19   71.1   1.3    4.2e-19   69.2   0.0    2.5  3  MutS_II   MutS domain II
    2.8e-13   50.1   0.0    5.8e-13   49.1   0.0    1.6  1  MutS_I    MutS domain I


Domain annotation for each model (and alignments):
>> MutS_V  MutS domain V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       2.8     1e+04      89     118 ..     207     236 ..     205     239 .. 0.79
   2 ?   -2.3   0.0       1.1   3.9e+03     114     132 ..     458     476 ..     448     494 .. 0.77
   3 !  274.1   1.0   1.8e-85   6.4e-82       1     188 []     722     912 ..     722     912 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 2.8
                 SS-HHHHHHHHHHHHHHHHHTT--EEEEEE CS
      MutS_V  89 GtstydGlaialavaeyllekikaktlfat 118
                 G +t+ G++i++a ++ l + i+    +at
  EPX72543.1 207 GENTTTGTSITKAELNRLKNIIEGCGALAT 236
                 678889999999999999888877666666 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 1.1
                 EEEEES-GGGGGHHHHSTT CS
      MutS_V 114 tlfatHyheltklaeklee 132
                 t ++tH ++ltkl e +e+
  EPX72543.1 458 TPLSTHCKNLTKLIELVET 476
                 5589*******99887654 PP

  == domain 3  score: 274.1 bits;  conditional E-value: 1.8e-85
                 EEEE-STTSSHHHHHHHHHHHHHHHHHT--BSSSEEEEE--SEEEEEE--------SS-HHHHHHHHHHHHHTT--TTSEEEEESTS-SS-HHHHHHHH CS
      MutS_V   1 llitGpnmaGkstylrqvalivllaqiGsfvpaekaeisivdkiftRvgasDdlakgkstFmvEmlEtasilknatekslvilDElGRGtstydGlaia 99 
                 l+itGpnm+Gksty+rq ++i+++aqiG+fvp+++a+i +vd+i++Rvga+D++ kg stFm+EmlEta+il++at++sl+i+DElGRGtst+dG+++a
  EPX72543.1 722 LIITGPNMGGKSTYIRQAGVIAVMAQIGCFVPCDSATIDVVDSILARVGAGDSQLKGVSTFMAEMLETATILRSATQRSLIIIDELGRGTSTTDGFGLA 820
                 59************************************************************************************************* PP

                 HHHHHHHHHTT--EEEEEES-GGGGGHHHHSTTEEEEEEEEE...EETTEEEEEEEEEES--SS--HHHHHHHTT--HHHHHHHHHHHHHTT CS
      MutS_V 100 lavaeyllekikaktlfatHyheltklaekleevknlhlavk...eeeedivflykvkegaaeksyGikvaklaglPesvverArevlkele 188
                 +a++e++++ki++++lfatHyhe+t++++++++vknlh++++   ++ +d+++ly+v+ega+++s+Gi+va+la +P++++e+A+ ++ ele
  EPX72543.1 821 WAITEHIVKKINCFCLFATHYHEMTRMSDEIPTVKNLHVTAHigdTNARDVALLYNVSEGASDRSFGIHVAELARFPAKIIEMAQAKAIELE 912
                 *****************************************98877779************************************9998886 PP

>> MutS_III  MutS domain III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.0   1.4   3.3e-37   1.2e-33       2     191 .]     324     630 ..     323     630 .. 0.90
   2 ?   -1.7   0.0      0.81   2.9e+03     141     141 ..     797     797 ..     660     974 .. 0.57

  Alignments for each domain:
  == domain 1  score: 117.0 bits;  conditional E-value: 3.3e-37
                 HHHHTTSSS-TTS..SSSS-HHHHH---SSHHHHHHHHHHHH--BS-HHHHHHHHHHHHH.T..TT.HHHHHHH...HTT---HHHHHHHHHTT---HH CS
                 xxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxx RF
    MutS_III   2 TlrnLeilenlrgg.skegsLlgvldrTvTamGaRlLrewllqPltdleeInaRldaVee.leneelreelrel...lrrlpDleRllsrislgkakar 95 
                 ++r+L++l   +g+  +++sL+g+l++++T+mG+R Lr+w+ qPl+d++ I++R+++V+  +e++e+r+ l ++   lr++pD+ Rl++r+  g+++ +
  EPX72543.1 324 AVRALNLLPPANGNaHRTMSLYGLLNHCRTPMGSRQLRRWIVQPLLDPKAIRRRHNLVSVfIEDPEVRQLLLDDdhlLRSIPDVPRLCRRLIRGSSTLE 422
                 899****886565555677****************************************98********99966666999******************* PP

                 HHHHHHHHHHHHHTTTTT---SSTHHHHH................HHHHHHHHHHB-SS--SSGGGS--B-T........................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxx................xxxxxxxxxxxxxxxxxxxxxxxxxxx........................... RF
    MutS_III  96 dlkallealkaleelvallekeklaesee................eslaelleeaideeplalekegedlra........................... 151
                 d+ ++++  kal+++v++l + k++++                  ++l el+e++id ++l++++     +                            
  EPX72543.1 423 DVVRIYQMAKALPNIVTALDSLKTEHKGLvdqvyttplsthcknlTKLIELVETTIDLDALDAHRYIIRAEFdeellelrqrleelensifdehkqaga 521
                 *9999999999999999998887765544999**999999885544444999999999999999999999999999999999999999*********** PP

                 .....................................................................HHHHH.HHHHHHHHHHHHHTHHHHHHHHHH CS
                 .....................................................................xxxxx.xxxxxxxxxxxxxxxxxxxxxxxx RF
    MutS_III 152 .....................................................................ieale.qelfqelleeveealerlrrlaea 180
                                                                                        + + + l +e+++  +++++ l+++ ++
  EPX72543.1 522 dlqqdtekklhleqhhlygwclrltraeagclrgrntryselstqkngvyfttkrlhnlnstymdyqksY-RYHqNGLAREVIKIAATYSSPLEAVGQI 619
                 ****************************************************************998853.333366777888666889********** PP

                 HHHHHHHHHHH CS
                 xxxxxxxxxxx RF
    MutS_III 181 laeLDvllSlA 191
                 +++LDv++S++
  EPX72543.1 620 ISHLDVITSFS 630
                 *********96 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.81
                 S CS
                 x RF
    MutS_III 141 a 141
                 +
  EPX72543.1 797 T 797
                 1 PP

>> MutS_IV  MutS family domain IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.6   1.6   3.3e-24   1.2e-20       1      90 [.     493     588 ..     493     590 .. 0.95

  Alignments for each domain:
  == domain 1  score: 73.6 bits;  conditional E-value: 3.3e-24
                 TTSHHHHHHHHHHHHHHHHHHHHHCCCCCCCT-...TTBEECCCSSSEEEEEE-TCCCTTT--...SEEEEEECTCEEEEECCCHHHHHHHHHHHH CS
     MutS_IV   1 gfdeeLdelrdrleelekeleeleekereklgi...kslkveynkvlGyylevtrseakkvpk...efirlqtlknseryttaelkkleaelleae 90 
                 +fdeeL elr+rleele+++++++++ +++l++   k+l++e+++++G++l++tr ea +++    ++ +l+t+kn++++tt++l++l+  +++ +
  EPX72543.1 493 EFDEELLELRQRLEELENSIFDEHKQAGADLQQdteKKLHLEQHHLYGWCLRLTRAEAGCLRGrntRYSELSTQKNGVYFTTKRLHNLNSTYMDYQ 588
                 69***********************************************************66669***********************9999876 PP

>> MutS_II  MutS domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.2   0.0   1.2e-22   4.2e-19       3     125 ..     148     285 ..     146     291 .. 0.93
   2 ?   -3.4   0.1       3.1   1.1e+04      65      96 ..     495     527 ..     483     534 .. 0.67
   3 ?   -0.8   0.1      0.49   1.8e+03      73     125 ..     575     624 ..     557     633 .. 0.76

  Alignments for each domain:
  == domain 1  score: 69.2 bits;  conditional E-value: 1.2e-22
                 EEE..EEEETTTSEEEEEEEETTTTEEEEEEEEE...-HHHHHHHHHH-ESEEEEESS-SCCCH......HHHHHCHCTTT-EEEEESCCCCSHCCHHH CS
     MutS_II   3 laA..isekregrrvGlafiDlstgefvvsefed...feeleaeLsrlsPkElllpedlsesta......eeessklrelrsrvgvretvefesekase 90 
                 l+A    +k+++r vG+afiD+ +++++vsef d   ++++ea+L++ ++kE+l+++   e+t+      ++e+++l+++++++g+ +t +++s ++ +
  EPX72543.1 148 LLAvtTRMKQDQRVVGVAFIDPFSRKIGVSEFVDsdsYTNFEALLVQTGAKECLISQQDGENTTtgtsitKAELNRLKNIIEGCGALATGIRNSYFSPK 246
                 67743344489999********************************************999999*********************************** PP

                 HCHHHB--STTTTTTT....GGG-HHHHHHHHHHHHHCC CS
     MutS_II  91 rleedfsvedldgfgl....ekekklalaAlgalisYle 125
                 ++e+ +++ +   +++    e  ++la+++++a+++Yl 
  EPX72543.1 247 DVELELAKVLDVPVTHarlpELSLQLAMSSCNAVLRYLG 285
                 ******99999999999********************95 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 3.1
                 HHCHCTTT-EEEEESCCCCSHCC.HHHHCHHHB CS
     MutS_II  65 ssklrelrsrvgvretvefesek.aserleedf 96 
                 +++l elr+r++  e+ +f+  k a  +l++d 
  EPX72543.1 495 DEELLELRQRLEELENSIFDEHKqAGADLQQDT 527
                 456788888888888877665551455555555 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 0.49
                 -EEEEESCCCCSHCCHHHHCHHHB--STTTTTTTGGG-HHHHHHHHHHHHHCC CS
     MutS_II  73 srvgvretvefesekaserleedfsvedldgfglekekklalaAlgalisYle 125
                 +r+ + ++++++++k+++  +  ++ e ++  +        l+A+g +is+l 
  EPX72543.1 575 KRLHNLNSTYMDYQKSYRYHQNGLAREVIKIAA---TYSSPLEAVGQIISHLD 624
                 466677778888888888888888888888864...46778999999999986 PP

>> MutS_I  MutS domain I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.1   0.0   1.6e-16   5.8e-13       3     111 ..      20     122 ..      18     124 .. 0.94

  Alignments for each domain:
  == domain 1  score: 49.1 bits;  conditional E-value: 1.6e-16
                 HHHHHHCCCHH-TTCEEEEEETTEEEEECHHHHHHHHHCSSSSTT.ESSSSC.EEEEEEEHHHHHHHHHHHHHT.T-EEEEEEE-S-HHHHS.S--EEE CS
      MutS_I   3 lmkqylelkkkykdavlffrvGdfYelfgeDAviaareleitltkrkkssekeipmagvPehalekylrkLvek.gykVavveqtetpaekkgvvkrev 100
                 ++++y +++k + +++++f++G+ Y + geDA ++a + ++t+++ k++++++++ +++  + + k++++++++  ++V+++  +++      ++ +e+
  EPX72543.1  20 MFSFYEKMPK-DSNTLRVFDRGETYVAIGEDASFVADNAYHTTSVLKYHNQSNLSFCTMFPSLFIKFAEEVLSNyAKRVEIWGSNKS------KTGFEL 111
                 899******9.99***********************************99999********************99********9944......789*** PP

                 EEEEBTTC-TT CS
      MutS_I 101 vrviTpGtltd 111
                  ++++pG++++
  EPX72543.1 112 LNQASPGNMQM 122
                 ********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (982 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       773  (0.0431145); expected 358.6 (0.02)
Passed bias filter:                      530  (0.029561); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.72u 0.31s 00:00:01.03 Elapsed: 00:00:00.44
# Mc/sec: 6773.21
//
Query:       EPX72544.1  [L=213]
Description: 4-amino-4-deoxychorismate lyase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.8e-30  106.5   0.1    2.2e-30  106.2   0.1    1.1  1  Aminotran_4    Amino-transferase class IV
  ------ inclusion threshold ------
       0.15   11.7   0.0       0.31   10.7   0.0    1.5  1  CRM1_repeat_2  CRM1 / Exportin repeat 2


Domain annotation for each model (and alignments):
>> Aminotran_4  Amino-transferase class IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.2   0.1   2.5e-34   2.2e-30       2     217 ..       3     204 ..       2     208 .. 0.87

  Alignments for each domain:
  == domain 1  score: 106.2 bits;  conditional E-value: 2.5e-34
  Aminotran_4   2 lfEtmrvyngeiffldeHleRLrksaellglelpfdeeelrkileelleannsengrlrllvsrgggglgaatsepsvavyvsalppgpesekelplv 99 
                  lfEt +  ngeif+l +Hl+R+++sa +lg ++p  e  ++k+l+  +e +n   +rlr+ +s++g          +++v+++++p ++e  +  +++
   EPX72544.1   3 LFETTLYSNGEIFLLHDHLNRMKNSASTLGYQWPGEEIVIQKLLHA-IESLNQ--ARLRWELSKDG----------KILVTAVPIPIHNEHPQY-TVF 86 
                  8****************************65655444444454444.555555..56*******99..........999999999999999998.899 PP

  Aminotran_4 100 tssdvrrdapsplpgaKtlnyldnvlarreakergad..evllvdedgnvtEgstsNvfivkggelitPplssgiLpGitrrallelakalgleve.. 193
                  ++++ + +  ++++  Kt++++ + +a  +   + a   ++ll++++g+vtE ++ N+ + +++++itP l +g+LpG++r++ll++    g  ve  
   EPX72544.1  87 LDTQPSDTQDNVTCVNKTTSRDIYSHAVHRTGIEYAKhqDALLYNTSGFVTESTIFNIAFHRDNQWITPNLLHGLLPGTMRKHLLST----GYIVEdt 180
                  9999999999999999********999888777664444************************************************....9978788 PP

  Aminotran_4 194 ereitlkdleeadeafltntlrgv 217
                  + ++  + l++ + ++l n+ r +
   EPX72544.1 181 QNKLHKENLKNGEQILLFNSFRKI 204
                  99******************9987 PP

>> CRM1_repeat_2  CRM1 / Exportin repeat 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   3.5e-05      0.31      28      55 ..     176     203 ..     175     207 .. 0.95

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 3.5e-05
  CRM1_repeat_2  28 iveneeGeivretvkdtdtialYktmre 55 
                    ive+ ++++ +e +k+ ++i l+++ r+
     EPX72544.1 176 IVEDTQNKLHKENLKNGEQILLFNSFRK 203
                    9************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       377  (0.0210274); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.64
# Mc/sec: 1001.14
//
Query:       EPX72545.1  [L=61]
Description: 40S ribosomal protein S30 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.4e-29  100.8   5.7    3.7e-29  100.7   5.7    1.0  1  Ribosomal_S30  Ribosomal protein S30


Domain annotation for each model (and alignments):
>> Ribosomal_S30  Ribosomal protein S30
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.7   5.7   2.1e-33   3.7e-29       1      56 [.       3      60 ..       3      61 .] 0.89

  Alignments for each domain:
  == domain 1  score: 100.7 bits;  conditional E-value: 2.1e-33
                   XTBX-STTTTHHHHHS-------------THHHHHHHHHHHTTS..SS--SSSSS-S- CS
  Ribosomal_S30  1 kvhGsLarAGKVrnqTPKveKqekkKkptGRakkRlqYnrRfvn..vvvggkkkkgpn 56
                   kvhGsLarAGKV++qTPKveKqek+K+p+GRa+kRl+Y rRfvn   ++ggk++++p+
     EPX72545.1  3 KVHGSLARAGKVKSQTPKVEKQEKPKQPKGRAYKRLLYVRRFVNvtNMAGGKRRMNPS 60
                   9*******************************************55556666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       388  (0.0216409); expected 358.6 (0.02)
Passed bias filter:                      241  (0.0134419); expected 358.6 (0.02)
Passed Vit filter:                         7  (0.000390429); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.27s 00:00:00.66 Elapsed: 00:00:00.53
# Mc/sec: 346.87
//
Query:       EPX72546.1  [L=379]
Description: HMG box protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.4e-26   90.7   0.9      1e-25   89.8   0.9    1.5  1  SprT-like       SprT-like family
     0.0031   17.4   3.2      0.008   16.1   3.2    1.8  1  Zn_ribbon_SprT  SprT-like zinc ribbon domain
     0.0042   17.5   0.1      0.011   16.2   0.1    1.7  1  HMG_box         HMG (high mobility group) box


Domain annotation for each model (and alignments):
>> SprT-like  SprT-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.8   0.9   1.7e-29     1e-25       1     113 []     142     262 ..     142     262 .. 0.95

  Alignments for each domain:
  == domain 1  score: 89.8 bits;  conditional E-value: 1.7e-29
   SprT-like   1 aeelfkklddavfggq.....aaggvkiiwskrlnttaGranlkr......atvrhhasIeLseklldsrsedrllntLaHElcHlalfvisgvrnnpH 88 
                 a+++++ l+ +vf+g+        ++ + wsk++nttaGra+lkr        ++ ha +eLsek++d   e rl ntLaHE cHla+++i+++ + pH
  EPX72546.1 142 AKQFLHILNMEVFQGKlteciLDNEILVMWSKSFNTTAGRATLKRprsksnLIQHVHAYVELSEKVVDC--EYRLYNTLAHESCHLACWLIDREMQSPH 238
                 57999************9999999*********************9999976677799***********..**********************99**** PP

   SprT-like  89 GaeFkawaakvekalaarleittkh 113
                 Ga Fkawa+++ + + + +eit kh
  EPX72546.1 239 GACFKAWAKRLMNKF-PSIEITSKH 262
                 ***********9999.*******99 PP

>> Zn_ribbon_SprT  SprT-like zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   3.2   1.3e-06     0.008       1      37 [.     268     307 ..     268     308 .. 0.91

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.3e-06
  Zn_ribbon_SprT   1 kkyvYrCtg..Cgreythhlsi.rrhnYrCrrCkgtLrgk 37 
                     +ky++ C +  C + y +h+++ ++ ++ C  C ++L+++
      EPX72546.1 268 YKYKWLCINeaCNKLYQRHSKSvDPKRHVCALCTSRLVQI 307
                     79999998455**************************985 PP

>> HMG_box  HMG (high mobility group) box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.1   1.8e-06     0.011       3      41 ..     312     350 ..     310     355 .. 0.93

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.8e-06
                 SS--HHHHHHHHHHHHHHHHSTTS-HHHHHHHHHHHHHH CS
     HMG_box   3 RplsafflfskeqraklkaenPelknaeiskklgekWka 41 
                 R l+ f l++ke+ a +k   P l+ +e++ k++ ++++
  EPX72546.1 312 RILNPFQLYMKENMARIKRHYPMLSHKELMNKVASEYRQ 350
                 55899******************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (379 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       706  (0.0393775); expected 358.6 (0.02)
Passed bias filter:                      396  (0.0220871); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2735.20
//
Query:       EPX72547.1  [L=1731]
Description: 1,3-beta-glucan synthase catalytic subunit Bgs1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
          0 1263.6   0.0          0 1262.9   0.0    1.3  1  Glucan_synthase  1,3-beta-glucan synthase component
    9.2e-38  129.5   4.4    3.5e-37  127.6   4.4    2.0  1  FKS1_dom1        1,3-beta-glucan synthase subunit FKS1, domai


Domain annotation for each model (and alignments):
>> Glucan_synthase  1,3-beta-glucan synthase component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ! 1262.9   0.0         0         0       2     818 ..     694    1509 ..     693    1510 .. 0.98

  Alignments for each domain:
  == domain 1  score: 1262.9 bits;  conditional E-value: 0
  Glucan_synthase    2 fpknseaerRisfFaqslstplpealkvekmptFtvLiPhysEkillslkeiikeeekksrvtlleYLkqlypkeWknFvkdtkllaeekee 93  
                       fp+nsea rRisfFaqsl+ ++p+ ++v++mptFtvL+PhysEkillsl+eii+ee++ srvtlleYLkqlyp eWknFv dtklla+e+e+
       EPX72547.1  694 FPANSEAARRISFFAQSLAESIPKHCSVDAMPTFTVLVPHYSEKILLSLREIIREEDQLSRVTLLEYLKQLYPIEWKNFVDDTKLLADESES 785 
                       899**************************************************************************************999 PP

  Glucan_synthase   94 ekeeeekkeeellkekiedlpfyliGfkssepeytlrtriWaslrsqtLyrtvsGfmnYskalkllyrvenaslvellseesekleeeleel 185 
                         +++ + e++ l++k+ dlpfy+iGfks++peytlrtriWaslr+qtLyrt++Gf nYs+a+kllyr+e ++lve ++ +  +l+eele +
       EPX72547.1  786 I-DSTMDGEKNDLQAKAYDLPFYCIGFKSATPEYTLRTRIWASLRTQTLYRTINGFSNYSRAIKLLYRTECPELVEWTNGDPARLDEELEVM 876 
                       8.7777888899999***************************************************************************** PP

  Glucan_synthase  186 aerKfklvvamqryakfkkeekenaelllkaypelkiayldeeaee.eeeekeyysvLidgsseideengkrkekyrirLsGnpilGdGKsd 276 
                       a+rKf+++v+mqryakf+kee+enae+ll+ayp+l+iay+de++++  +ee+ +ysvLidg++ i+ engkr++kyrirLsGnpilGdGKsd
       EPX72547.1  877 ANRKFRFCVSMQRYAKFTKEESENAEFLLRAYPDLQIAYMDEDPPTrPSEERGIYSVLIDGHCPIM-ENGKRRPKYRIRLSGNPILGDGKSD 967 
                       ******************************************76554899999************9.************************* PP

  Glucan_synthase  277 nqnhaiiftRGeyiqviDanqdnyleEclKirsvLaefeeleleskkpyaeeiekeeekepvailGaREyiFsenigvLgdiaagkEqtFgt 368 
                       nqn++i ++RGey+q++DanqdnyleEclKir++Laefe+++   ++py+ ++ k+++++pvailGaREyiFsen+g+Lgd+aa+kEq Fgt
       EPX72547.1  968 NQNMSIPYIRGEYVQMVDANQDNYLEECLKIRNILAEFEQFNPPLHNPYSVNA-KSTTNNPVAILGAREYIFSENTGMLGDVAAAKEQCFGT 1058
                       *************************************************9877.78999********************************* PP

  Glucan_synthase  369 lfaRtlaeiggklHYGHPDflnaifmttRGGvsKaqkglhlnEDiyaGmnallRgGrikHseYiqcGKGRDlGfgsilnFttKigaGmgEql 460 
                       +faR+l+ iggklHYGHPDf+n +fmttRGGvsKaqkglh+nEDiyaGm+al+RgGrikHs+Y+qcGKGRDlGfgsilnFttKig+Gm+Eq+
       EPX72547.1 1059 MFARILSLIGGKLHYGHPDFINVLFMTTRGGVSKAQKGLHVNEDIYAGMTALQRGGRIKHSDYYQCGKGRDLGFGSILNFTTKIGTGMAEQM 1150
                       ******************************************************************************************** PP

  Glucan_synthase  461 LsReyyylgtqlpldRfLsfyyahvGfhlnnllivlsvqlflllllnlgalekesiiceydkskkitdlekplgCynlkpvlewvkivvlsi 552 
                       LsRey++lgtqlp+dRfLsf+yah+Gfh+nn++i++s+ql++l+++nlga+ + + +c+y++ +++t++ +p gCy+l+pvlew+k+++lsi
       EPX72547.1 1151 LSREYFHLGTQLPFDRFLSFFYAHAGFHVNNMVIMFSLQLLMLVIINLGAMFSVVPVCKYRQFDPVTAPLSPRGCYQLQPVLEWLKRCILSI 1242
                       ******************************************************************************************** PP

  Glucan_synthase  553 fivffisflPllvqellergvlkavsrllkhllslsplfevfvcqiyaksllkdllfGgAkYiatGRgfavtrisfaelysrfasssiykgi 644 
                       fivf i+f+Pl+v el erg+l+ v r+ k+++slsp+fe+f+cqiya+sl+ +l+fGgA+Yi+t+Rgfa+ r++fa lysrf+s s+y+g+
       EPX72547.1 1243 FIVFGIAFVPLAVCELNERGALRMVIRVSKQICSLSPIFEIFTCQIYAQSLIANLSFGGARYIGTSRGFATVRVPFALLYSRFSSPSLYFGS 1334
                       ******************************************************************************************** PP

  Glucan_synthase  645 ellllllfatvtvwqaallyfwitvvslilaPflfnPhqfslldffvDyrdflrWlsrgnskskeesWisyvrqsrlritglkkkvlgeese 736 
                       +l+++ll+ ++t w ++++yfwit+++l+++Pfl+nPhqfs++dffvDyr+f+rW  r ns+ +++sWi +++ +r+r+tg+k+k++g++++
       EPX72547.1 1335 RLMFMLLYGSITAWLPHYIYFWITLIALCVSPFLYNPHQFSWTDFFVDYREFIRWTFRENSRNHSNSWIGNCQLTRTRVTGYKRKIYGKKAD 1426
                       ******************************************************************************************** PP

  Glucan_synthase  737 keskdvkrasllnlllseiilellvvlllliaylfinsqtgvke.aeatnsvlrlaivsllpillnvvvllvlfalslllgpl 818 
                       k s+d+ ra+++++++ ei+ +l ++++++i++lf ns  g ++ +++tn+++rl+i+sl+p++l++ + +++f+l ++l p+
       EPX72547.1 1427 KISMDSPRARITTMFYGEILGPLGTLFFTCIPFLFANSLPGNEDiSKRTNAFIRLIIMSLVPLVLSAGIAILFFCLGIVLRPV 1509
                       ****************************************996526789***************************9998875 PP

>> FKS1_dom1  1,3-beta-glucan synthase subunit FKS1, domain-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.6   4.4   3.9e-41   3.5e-37       2     128 ..     187     294 ..     186     295 .. 0.93

  Alignments for each domain:
  == domain 1  score: 127.6 bits;  conditional E-value: 3.9e-41
   FKS1_dom1   2 kvlqiaLylliWGEaanvRflpeclcyifkcaadyleseeakeeeeelkeleeileekvseaaaseeeesfLkkvitPlyevlrkqeaeknkegkyvrr 100
                 +++q++Ly+l+WGEa+nvRf+peclc+i+kca+dy+ s+ea++ +++l                  ++e fL++vitP+y++ ++q +e   +gkyvrr
  EPX72547.1 187 MMVQLCLYFLCWGEANNVRFMPECLCFIYKCAYDYYISSEARDLDSAL------------------PKEYFLDSVITPVYRFFHAQLFEV-LDGKYVRR 266
                 799*********************************997766655555..................899**************9999999.99****** PP

   FKS1_dom1 101 ekdHskiigYDDlNelFWskegieklkl 128
                 e+dH++ igYDD+N++FWs +g+e++k+
  EPX72547.1 267 ERDHASNIGYDDINQFFWSYKGLEEIKC 294
                 ************************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1731 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       574  (0.0320152); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.88u 0.26s 00:00:01.14 Elapsed: 00:00:00.44
# Mc/sec: 11848.71
//
Query:       EPX72548.1  [L=420]
Description: MADS-box transcription factor Mbx1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-16   59.0   0.4    3.8e-16   58.3   0.4    1.3  1  SRF-TF    SRF-type transcription factor (DNA-binding and dime


Domain annotation for each model (and alignments):
>> SRF-TF  SRF-type transcription factor (DNA-binding and dimerisation domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.3   0.4   2.1e-20   3.8e-16       1      48 []      19      66 ..      19      66 .. 0.95

  Alignments for each domain:
  == domain 1  score: 58.3 bits;  conditional E-value: 2.1e-20
      SRF-TF  1 kIeneraRqvtFsKRrnGLfKKAsELsvLcgvevavvvfspngklytf 48
                +I + ++++ tF++Rr GLfKKA ELsvLc+++v v+v++ ++ ++ +
  EPX72548.1 19 RIADAKNKSLTFNRRRLGLFKKAFELSVLCDAKVVVLVYDAKNACHVY 66
                799************************************999888866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (420 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       541  (0.0301746); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.46
# Mc/sec: 2743.57
//
Query:       EPX72549.1  [L=681]
Description: group I intron splicing factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      1e-13   51.3   0.5    1.3e-07   31.6   0.0    3.6  3  PPR_2            PPR repeat family
    8.8e-13   47.6   0.2    4.7e-05   23.4   0.0    4.0  3  PPR              PPR repeat
    2.2e-05   24.4   0.7    7.6e-05   22.7   0.1    2.1  2  PPR_3            Pentatricopeptide repeat domain
     0.0004   20.0   0.2          1    9.1   0.0    3.2  3  PPR_1            PPR repeat
    0.00093   18.6   0.0     0.0017   17.8   0.0    1.4  1  PPR_long         Pentacotripeptide-repeat region of PRORP
     0.0078   16.6   1.4      0.041   14.3   0.6    2.6  3  Snapin_Pallidin  Snapin/Pallidin
  ------ inclusion threshold ------
       0.08   12.6   0.1       0.32   10.6   0.1    2.1  1  Vac_Fusion       Chordopoxvirus multifunctional envelope prot
       0.12   11.9   3.6      0.047   13.2   0.6    1.8  2  DUF3153          Protein of unknown function (DUF3153)
       0.78   10.1   5.8       0.23   11.8   1.4    2.6  3  E2F_CC-MB        E2F transcription factor CC-MB domain
        2.3    7.9   5.2       0.62    9.7   1.4    2.0  2  Med4             Vitamin-D-receptor interacting Mediator subu


Domain annotation for each model (and alignments):
>> PPR_2  PPR repeat family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.1   7.9e-05      0.14      10      34 ..     304     328 ..     299     335 .. 0.83
   2 !   31.6   0.0   7.5e-11   1.3e-07       1      49 [.     332     383 ..     332     384 .. 0.92
   3 ?    3.7   0.0     0.039        70       7      26 ..     618     637 ..     616     646 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 7.9e-05
       PPR_2  10 IsglckkgkveeAfklfneMkkrgl 34 
                 +  +ck+ + ++Af+lf+ Mk  ++
  EPX72549.1 304 LGSFCKAQMTSQAFSLFDFMKFVSV 328
                 678******************9766 PP

  == domain 2  score: 31.6 bits;  conditional E-value: 7.5e-11
       PPR_2   1 pdvvtyNtlIsglckkgkveeAfklfneMkkrgl...ePnsyTysilikglc 49 
                 p+   yN+lI+ ++ ++k+e+A++l+n+M kr +   +P++ T + li++l 
  EPX72549.1 332 PNENDYNSLIHLCAVQKKPEKALELYNDMTKRPInplRPTELTINNLIHALS 383
                 56667***************************988889***********985 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.039
       PPR_2   7 NtlIsglckkgkveeAfklf 26 
                 + +Is + k+g +e A kl+
  EPX72549.1 618 TLMISLFSKHGYLELARKLL 637
                 579***************96 PP

>> PPR  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.1   0.00084       1.5       3      27 ..     300     324 ..     298     326 .. 0.91
   2 !   23.4   0.0   2.6e-08   4.7e-05       3      29 ..     337     363 ..     336     365 .. 0.95
   3 !   10.2   0.0   0.00041      0.74       4      23 ..     618     637 ..     616     644 .. 0.91

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00084
         PPR   3 ynslIsgycknGkleeAlelfkeMk 27 
                 ++  + ++ck+ + + A++lf+ Mk
  EPX72549.1 300 FSLCLGSFCKAQMTSQAFSLFDFMK 324
                 5677899*****************8 PP

  == domain 2  score: 23.4 bits;  conditional E-value: 2.6e-08
         PPR   3 ynslIsgycknGkleeAlelfkeMkek 29 
                 ynslI+ ++   k+e+Alel+++M ++
  EPX72549.1 337 YNSLIHLCAVQKKPEKALELYNDMTKR 363
                 9***********************987 PP

  == domain 3  score: 10.2 bits;  conditional E-value: 0.00041
         PPR   4 nslIsgycknGkleeAlelf 23 
                 + +Is ++k+G+le A +l+
  EPX72549.1 618 TLMISLFSKHGYLELARKLL 637
                 78****************97 PP

>> PPR_3  Pentatricopeptide repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.1   4.2e-08   7.6e-05      11      58 ..     330     380 ..     322     384 .. 0.81
   2 ?   -1.9   0.0       2.1   3.7e+03      10      34 ..     403     427 ..     396     433 .. 0.76

  Alignments for each domain:
  == domain 1  score: 22.7 bits;  conditional E-value: 4.2e-08
       PPR_3  11 ikldvvtYthLLtayanagnkklalevlermkkkgi...kPtvvtyNailg 58 
                   ++ ++Y++L++++a++++ + ale  + m k  i   +Pt +t N ++ 
  EPX72549.1 330 TAPNENDYNSLIHLCAVQKKPEKALELYNDMTKRPInplRPTELTINNLIH 380
                 56899****************************887222467777777776 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 2.1
       PPR_3  10 gikldvvtYthLLtayanagnkkla 34 
                 g+  +  t   LL+++a+ gn +++
  EPX72549.1 403 GLAANAQTSYELLRLAAQSGNINAL 427
                 666777777889*******997765 PP

>> PPR_1  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   0.0   0.00058         1      16      34 .]     306     324 ..     304     324 .. 0.94
   2 !    7.1   0.0    0.0025       4.5       5      34 .]     332     361 ..     329     361 .. 0.93
   3 ?   -0.9   0.0      0.79   1.4e+03      13      30 ..     620     637 ..     618     637 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00058
                 HHHHTS-HHHHHHHHHHHH CS
       PPR_1  16 GlCkaGrvdeAfelfdeMe 34 
                 ++Cka +   Af lfd M+
  EPX72549.1 306 SFCKAQMTSQAFSLFDFMK 324
                 7*****************6 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0025
                 --HHHHHHHHHHHHHTS-HHHHHHHHHHHH CS
       PPR_1   5 PdvvTYNtLIdGlCkaGrvdeAfelfdeMe 34 
                 P+   YN+LI+ +  + + ++A+el ++M+
  EPX72549.1 332 PNENDYNSLIHLCAVQKKPEKALELYNDMT 361
                 89999***********************95 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.79
                 HHHHHHHTS-HHHHHHHH CS
       PPR_1  13 LIdGlCkaGrvdeAfelf 30 
                 +I+ + k+G ++ A +l+
  EPX72549.1 620 MISLFSKHGYLELARKLL 637
                 899999********9997 PP

>> PPR_long  Pentacotripeptide-repeat region of PRORP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   9.4e-07    0.0017      69     126 ..     311     369 ..     265     436 .. 0.67

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 9.4e-07
                 HHHHHHHHHHHHHHH..TT----HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH-S---HH CS
    PPR_long  69 kalargfevfeamka..kgvspnEatvtalarlaaakedgdlafelvkemekagvsPrLR 126
                 +  +++f  f+ mk    + +pnE  + +l++l+a ++  ++a el ++m+k  ++P LR
  EPX72549.1 311 QMTSQAFSLFDFMKFvsVNTAPNENDYNSLIHLCAVQKKPEKALELYNDMTKRPINP-LR 369
                 334566776666665336777888888888888888888888888888888776665.33 PP

>> Snapin_Pallidin  Snapin/Pallidin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.6   2.3e-05     0.041      16      52 ..      48      85 ..      46      95 .. 0.86
   2 ?   -2.8   0.0         5   8.9e+03      54      67 ..     605     618 ..     600     620 .. 0.80
   3 ?   -2.8   0.0       5.1   9.2e+03      56      71 ..     649     664 ..     632     669 .. 0.71

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 2.3e-05
  Snapin_Pallidin 16 deldeklkelrqsQeeLleqldrlnekLkeleeaqe.a 52
                     +++ +++++l++ Q+eL +++++l  +L+ ++++q  +
       EPX72549.1 48 QRFASNVASLKAAQQELDQRIKQLEGNLETIRKNQLnK 85
                     678899************************99998744 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 5
  Snapin_Pallidin  54 vlpdlkeyakKLvn 67 
                      ++pdlk y +K+++
       EPX72549.1 605 IPPDLKGYEQKITT 618
                      57899999999875 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 5.1
  Snapin_Pallidin  56 pdlkeyakKLvnikkr 71 
                      p+   y++KL+++kk+
       EPX72549.1 649 PRSLGYLRKLASLKKD 664
                      5566789999999886 PP

>> Vac_Fusion  Chordopoxvirus multifunctional envelope protein A27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.1   0.00018      0.32      13      45 ..      51      83 ..      44      86 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00018
                HHHHHHHHHHHHHHHHHHHHHH-XXXXXXXXXX CS
  Vac_Fusion 13 ekdfqlvikcckrvnealkRlEnHleTlRkaml 45
                + ++  +   +++ ++++k lE  leT+Rk+ l
  EPX72549.1 51 ASNVASLKAAQQELDQRIKQLEGNLETIRKNQL 83
                55666677789999****************966 PP

>> DUF3153  Protein of unknown function (DUF3153)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.6   2.6e-05     0.047      27      76 ..      60     113 ..      48     157 .. 0.79
   2 ?   -2.8   0.1       2.2     4e+03     149     168 ..     419     441 ..     403     441 .. 0.67

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.6e-05
     DUF3153  27 wqeeleqrlaelggkveerdeeel.rltipflngeeleellnrlvsrase...a 76 
                  q+el+qr+++l+g+ e  ++++l +l +p  + +++e+ l+++ +++++   +
  EPX72549.1  60 AQQELDQRIKQLEGNLETIRKNQLnKLHFPRFSEQDIEQALYSIEQQEESdsnS 113
                 589**************999999989*****************99976664443 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 2.2
     DUF3153 149 lepGeiNhLeasf...WlpspLg 168
                  ++G iN L+  +   W+ +p++
  EPX72549.1 419 AQSGNINALKNLYnqyWIDNPIL 441
                 57888887765433338888875 PP

>> E2F_CC-MB  E2F transcription factor CC-MB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   1.4   0.00013      0.23       4      47 ..      53      98 ..      50     118 .. 0.87
   2 ?   -3.1   0.0       5.9   1.1e+04      14      35 ..     138     159 ..     134     180 .. 0.78
   3 ?   -3.9   0.0        10   1.8e+04      47      67 ..     660     679 ..     654     679 .. 0.64

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00013
   E2F_CC-MB  4 elesleeeeqkLDelieklteqlknltedeknqlaY..vtyedirs 47
                +++sl++ +q+LD+ i++l+ +l+ + +++ n+l +   +++di +
  EPX72549.1 53 NVASLKAAQQELDQRIKQLEGNLETIRKNQLNKLHFprFSEQDIEQ 98
                7899**********************99999998887788999987 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 5.9
   E2F_CC-MB  14 kLDelieklteqlknltedekn 35 
                 +LD+  +++ ++l  +++d++n
  EPX72549.1 138 QLDHYENEVLNSLVVVEKDSQN 159
                 7888888888888888777777 PP

  == domain 3  score: -3.9 bits;  conditional E-value: 10
   E2F_CC-MB  47 siasfkeqtviaikAppgtql 67 
                 s++  ++ tv  i    gtq+
  EPX72549.1 660 SLK-KDQATVQLIDGITGTQI 679
                 332.35578999999888885 PP

>> Med4  Vitamin-D-receptor interacting Mediator subunit 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   1.4   0.00034      0.62      24      68 ..      47      92 ..      45     119 .. 0.77
   2 ?   -3.0   0.1       2.8     5e+03      14      28 ..     243     257 ..     240     261 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00034
        Med4 24 hqknearilqLraeveslDekikeivksLkeyek.eLkavpdqens 68
                +q    ++ +L+a +++lD+ ik+++++L +++k +L+++ +  +s
  EPX72549.1 47 FQRFASNVASLKAAQQELDQRIKQLEGNLETIRKnQLNKLHFPRFS 92
                6777788899**********************98246666544444 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 2.8
        Med4  14 lskslkeleehqkne 28 
                 +skslk le+++k  
  EPX72549.1 243 FSKSLKLLEQYKKTD 257
                 6899*******9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (681 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1212  (0.0676); expected 358.6 (0.02)
Passed bias filter:                      740  (0.0412739); expected 358.6 (0.02)
Passed Vit filter:                        88  (0.00490825); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.67u 0.27s 00:00:00.94 Elapsed: 00:00:00.40
# Mc/sec: 5062.76
//
Query:       EPX72550.1  [L=481]
Description: arrestin family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-11   45.2   1.2    2.3e-10   41.1   0.2    2.3  2  Arrestin_C  Arrestin (or S-antigen), C-terminal domain
  ------ inclusion threshold ------
        4.6    6.9  12.0         16    5.2   4.1    3.0  2  DUF4588     Domain of unknown function (DUF4588)


Domain annotation for each model (and alignments):
>> Arrestin_C  Arrestin (or S-antigen), C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.1     0.015   1.4e+02      66     129 ..     185     261 ..     131     266 .. 0.68
   2 !   41.1   0.2   2.5e-14   2.3e-10       2     133 ..     285     425 ..     284     426 .. 0.80

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.015
                 EEE---.....B-TTEE.EEEEEEE.--........--B--..---S---EEEEEEEEEEEEEEESSEEEEEEEEEEEE CS
  Arrestin_C  66 sdsvkv.....tsaakdkletevelqiP........eeltp..ssarnvelikvsYklkvkltlsgsggelslelPivl 129
                 s++ ++     +s ++ ++++  ++++P        e ltp  + +r+++  + +Y+l+ +l+l   + ++   +Piv+
  EPX72550.1 185 SVTSDLqksteKSSSSSSYNI-WSMDLPfemkysegEVLTPtfDLFRSGFSCSTKYQLRAVLSLAD-SEDIFECVPIVI 261
                 222222322235555666664.6668888888888878888555559****************994.357777778877 PP

  == domain 2  score: 41.1 bits;  conditional E-value: 2.5e-14
                 ---EEEEEEES-SEEETT--EEEEEEEE..E-SSSEEEEEEEEEEEEEEEESS......SEEEEEEEEEE.EEE---B-TTEE.EEEEEEE.--.--B- CS
  Arrestin_C   2 dgkvsleaslpkkgyvpGetipvtvkid..ndskkkvkkikvslvqhvdvcafnr....snkkeknvvak.sdsvkvtsaakdkletevelqiP.eelt 92 
                 dg+v +eas+pk+++ p + ++v ++i+  n sk +v+++++slv+ v++   ++       + k+++   +d ++v +  kd l ++++  +P ++l 
  EPX72550.1 285 DGRVVVEASIPKQCIGPMDLLTVFISIRasNGSKIRVQQLSLSLVECVSFRHPSSshspI-VRSKKILKVeQDLDDV-RLGKDGLSQTLSKVFPdPDLD 381
                 79***************************************************8887532.2333333333566666.666666776777777763555 PP

                 ----....S---EEEEEEEEEEEEEEESSEEEEEEEEEEEEEB-- CS
  Arrestin_C  93 pssa....rnvelikvsYklkvkltlsgsggelslelPivlgsvp 133
                  ss+    ++++l+kv Y + +k++l  ++++++++ Pi++  vp
  EPX72550.1 382 DSSIqgftTSSDLYKVTYMVLIKVRLY-RARNVEISYPITVSPVP 425
                 5444555569*****************.889*********97766 PP

>> DUF4588  Domain of unknown function (DUF4588)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.9    0.0049        44     177     250 ..      75     146 ..      60     148 .. 0.78
   2 ?    5.2   4.1    0.0018        16     126     219 ..     156     360 ..     147     369 .. 0.78

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.0049
     DUF4588 177 amskislavelrsptsfrpssvsakssrrrlailksledlsefesddlarhldsrkrsssqkddvltdsPsrkr 250
                 ++++is + +l +++ f pss+s++s++ + +il  +e+ +   sdd+ +   s    +   d  l+d Psr r
  EPX72550.1  75 VSNHISEPKRLVQQVLFPPSSSSSSSKNDQKSILYFSENAQ--ASDDVLSPSSSTSGINNVYDFYLHDQPSRHR 146
                 556688889999*******9888888888888998444433..3799888877777777777888999999987 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0018
     DUF4588 126 kserertrerasprerevekdksssatelsssveidLqpfreaialnslsgamsk............................................ 180
                  ++++ +++++ p+++ +++++  +++   ssv  dLq++ e ++ +s  +++s                                             
  EPX72550.1 156 PHVQNVSQSPSMPSHAYSQTSD--TSSMQASSVTSDLQKSTEKSSSSSSYNIWSMdlpfemkysegevltptfdlfrsgfscstkyqlravlsladsed 252
                 4556666777777777776663..445556677788*****9999999999999988888888888888888888888888888888888888888888 PP

     DUF4588 181 .....................................................................islavelrsptsfrpssvsakssrrrlail 210
                                                                                       +l+++l + +sfr+ s+s+++  r  +il
  EPX72550.1 253 ifecvpivihrydtlsswgmynspiylkeasidgrvvveasipkqcigpmdlltvfisirasngskirvQQLSLSLVECVSFRHPSSSHSPIVRSKKIL 351
                 888888888888888888888888888888888888888888888888888888888888888888888777888888888888888888888888888 PP

     DUF4588 211 ksledlsef 219
                 k  +dl+++
  EPX72550.1 352 KVEQDLDDV 360
                 877777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (481 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       694  (0.0387082); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.29s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 3181.63
//
Query:       EPX72551.1  [L=571]
Description: SUMO deconjugating enzyme Ulp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.7e-48  163.9   0.1    7.9e-48  163.2   0.1    1.4  1  Peptidase_C48  Ulp1 protease family, C-terminal catalytic dom


Domain annotation for each model (and alignments):
>> Peptidase_C48  Ulp1 protease family, C-terminal catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.2   0.1   4.4e-52   7.9e-48       1     208 [.     394     565 ..     394     570 .. 0.95

  Alignments for each domain:
  == domain 1  score: 163.2 bits;  conditional E-value: 4.4e-52
                    ---BHHHHHHHHHHHHHHHHHCCCTCCCEEE--THHHHHHC..........SS.......TCHCHHHCTTCCCCCS..-GGG-SEEEEEEEC.TTE CS
  Peptidase_C48   1 ewlndtvidfylkllaerlesseskaervhflntffvskLtkavkdfkknkskkkfkeskkkdlyngvrrwtrkvnkedlfdkdiiyiPinedgkH 96 
                    +wlnd+vi+fy++ll++r++ s+s+ +rvh++ntff++ L+                    k++y+gvrrw r+  +  ++d d++++P+++ ++H
     EPX72551.1 394 QWLNDEVINFYMNLLSDRSR-SDSSLPRVHVFNTFFYTTLQ--------------------KKGYAGVRRWARRA-SMKIADFDCVLVPVHL-DVH 466
                    7***************9988.********************....................899**********5.99**************.*** PP

                    EEEEEEETCCCEEEEE-TTS-SSH.HHHHHHHHHHHHHHHHHCCCCCSTT-.GGGEEEEEEE-----SSCCCHHHHHHHHHHHHHCTHHCHHHHHS CS
  Peptidase_C48  97 WvlliinlpdktililDSlislhtvkkenrpinnlkpyLleealkkkqkqldltpfeierltkvpqqknsgDCGiyvlkfiellaegapqessvtl 192
                    W++++in+++k+++++DSl++++      ++++ lk+y ++e++     ++d t++e+   ++ p+q+n++DCG++++k +e+la+++p  +s+  
     EPX72551.1 467 WCMAAINKKKKRFEYWDSLAGSPG-----KVFDLLKEYYVAETKG----AVDITDWENYIDHNSPRQQNGYDCGVFACKTAECLAREVPLHFSQ-- 551
                    ************************.....*************855....5588**************************************755.. PP

                    S.HHHHHHHHHHHTTH CS
  Peptidase_C48 193 tekdvdsfrkklaldi 208
                      kd++++r ++a  i
     EPX72551.1 552 --KDMPELRLRMAASI 565
                    ..***********654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (571 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       546  (0.0304535); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.42
# Mc/sec: 4042.63
//
Query:       EPX72552.1  [L=766]
Description: topoisomerase II-associated deadenylation- dependent mRNA-decapping factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   9.3e-213  709.1   6.2   1.3e-210  701.9   6.2    2.5  1  PAT1      Topoisomerase II-associated protein PAT1


Domain annotation for each model (and alignments):
>> PAT1  Topoisomerase II-associated protein PAT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  701.9   6.2  7.4e-215  1.3e-210       1     855 [.       1     761 [.       1     762 [. 0.84

  Alignments for each domain:
  == domain 1  score: 701.9 bits;  conditional E-value: 7.4e-215
        PAT1   1 msFfgfdttlprdahntaapGfsqahdpfaglskaeeedddaldFedtYdgLgdqLdetdDafNddTFggegggdevsakkvgkdfDffgqTakvadai 99 
                 msFfgfdt lp+++                 + k+ e d+d +dFe+tYd+L+d+L+e++D++Nd+TFg       +sa+++g+dfDff qTa+v+ ++
  EPX72552.1   1 MSFFGFDTNLPKES----------------MIPKNGEYDEDGIDFEETYDDLADRLEEEGDDLNDETFG-------ISAGNIGRDFDFFHQTAQVSTKL 76 
                 9*********9874................4556677778****************************6.......7789******************* PP

        PAT1 100 eeEqlrfsrqqpaaka.sekaaaaelkevkkasqaseqkskpvrtgyekykepepipdlqvdaslWg.vaekkaaasaaapevaaaaasla.sasrkvl 195
                 e+Eq   + ++p+ k   ++++aa+l++v++++++s+   +  ++  +  +++++++dl+++as+W+ + ++k++ +aa pev++ +++l  ++s+kv+
  EPX72552.1  77 ENEQ--DDTRHPMGKVyDASTQAASLPQVNPTAASSA---RNPEANLDVSANTNMLSDLRPMASIWEtIVPEKPSVQAAPPEVSSFQNRLGaQNSEKVF 170
                 ****..6788999986233444455555555554444...445667777788899************86677777777789***99999887899**** PP

        PAT1 196 sleEvEaamraqakkkaaqaaaaaaasqqPaaeqaeqaeaaaqaakaeqaqqapesakeqqqeqeqaaqaqqkkeqgkpvtilqrpqskqakpaepsas 294
                 sl+E+E+++    +++ + ++     +qqP+a++  + +        + a q+p+ +         +  +++ ++ + +v+ +   +  +++       
  EPX72552.1 171 SLQELEEQLFNSLNAPGSGPK-----PQQPVASAMPPVNPVV-----SPAVQVPPPT---------SLAHDTFAALDPAVASIGNVSFPTQQ------- 243
                 *********776665554433.....2344433222222111.....1112222222.........11122222222233333333222111....... PP

        PAT1 295 seaqeakqqappakvqptqilqnpnrlaarlelsqkeqaaaqaapeqeakrqqssagkqaqiithpqqlaqlseee...kaayLeeeakrakRnhkifl 390
                  ++ ++   + p ++qp+q++ n n  + +++           +p++        +  +++    p  l++l+++e   +a+ L+e++++++R+h  +l
  EPX72552.1 244 -SNVANPGLPLPPMMQPSQLFANSNLPPPQIPP--------VVYPSN------M-VYGAEP--VPPVPLLNLFQQEkfeQARTLDEKRQKLERDH--ML 322
                 .11223456677789**********88655521........112211......1.111122..3466788888887555899*************..** PP

        PAT1 391 lskdnGlmTpqDKnFitRiqlqqLvsAtGnpadqgsdeslseDFYYqVysqirggqrqnpeqplsnFaqTYLfqtgsRqggarrrergaenhvqrmeqq 489
                 +++++GlmT++DK+Fi+Riq++qL+s          ++  seDFYY+Vys irg  r+ +e+++s+F+ TYL ++++R     rr+r++en++qr++qq
  EPX72552.1 323 MAQCAGLMTRSDKSFIARIQISQLMS----------EDPESEDFYYRVYSIIRG--RNPSEEDSSHFIRTYLGPSSNR-----RRGRRSENPMQRLQQQ 404
                 **************************..........8999**************..*********************9.....999************* PP

        PAT1 490 vqraVeaAKnkPKnkqLvieGsLGKisfsnaktPkpLLnikrteseedakrpssakkkaksseasldrksiLrniEkvYstlmkledheRkmppplaee 588
                 +q++V++ K++PK++qL++eG+LGKi++++++tP++LLn+kr+  ++ +     ak+++ +    +++k++L++iEk+Y++l+++e + Rk+++     
  EPX72552.1 405 LQKLVSSTKERPKTTQLSLEGALGKIAINTVRTPRQLLNVKRPSEHTIN-----AKETTFKG--FATKKDVLQAIEKIYDWLLDFEHSLRKLSV----- 491
                 *******************************************877743.....33332233..379**************************9..... PP

        PAT1 589 sdaeleekhkeWkeklqelneklWeeLkvhepi..gattvhPFiallsfpKGkkaipRifrhlskeqrvtiLtmivvhlDqLdvvrkaqvtsgetqlna 685
                 s+ e+ e++++Wk+ l+++ e++W+ L+++e++  ++++++PF++++s+pKG++++pR+++hlskeq+++iL +iv ++D+L++v k++++++  +l+a
  EPX72552.1 492 SNVEDDETFNQWKNDLNHKLESIWNVLHINESLdsSSKARPPFLSVISHPKGMRLLPRLLPHLSKEQQFAILSVIVGNVDSLNIVLKGTFDANG-ELPA 589
                 77889999*************************888899***************************************************7655.6*** PP

        PAT1 686 avreeielFsqavmpsLlaylneldldivtgllgliltklnvdliaktriGlslLTlllsRaellkqsgagseeeweeweetynklFdrleptlpeiFP 784
                  +  e+ +F+q+v+psLl+++nel++  v+ l++++l + n  ++++t+iGls+LT+l+sRae+lkq+g+++ee++e+w +++n lFd l+++++++FP
  EPX72552.1 590 GIAAEMMAFTQFVIPSLLTIVNELGMANVNILFSQLLGRSNPLYLIQTKIGLSFLTMLISRAEILKQTGSCTEEDKENWARIFNGLFDCLKDHFATVFP 688
                 **************************************************************************************************9 PP

        PAT1 785 ..gsvnsgedvyvWqlLAalgigAspdqqqrLVlavkdRVldtvalsktlPedlaaqRlanVNLFmraiGLDv 855
                    +  ++++ y W++LAa++++As+dq++ LV +++dRVld++ +sk+ Pe++a+ R+anVNLF++a+GLD+
  EPX72552.1 689 ppNARAYADESYPWEFLAACATAASSDQHFVLVSETRDRVLDNIITSKRSPEEIAVVRIANVNLFLNAMGLDA 761
                 66667899****************************************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (766 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       717  (0.0399911); expected 358.6 (0.02)
Passed bias filter:                      499  (0.027832); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.30s 00:00:00.96 Elapsed: 00:00:00.44
# Mc/sec: 5247.87
//
Query:       EPX72553.1  [L=247]
Description: hypothetical protein SOCG_00316 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.01   16.0   0.9       0.13   12.5   0.6    2.5  2  DUF4798   Domain of unknown function (DUF4798)
       0.14   12.7   0.2       0.37   11.3   0.2    1.7  1  DUF4231   Protein of unknown function (DUF4231)


Domain annotation for each model (and alignments):
>> DUF4798  Domain of unknown function (DUF4798)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0     0.065   5.8e+02      31      66 ..      13      48 ..       6      95 .. 0.78
   2 ?   12.5   0.6   1.4e-05      0.13       6      49 ..     153     195 ..     149     197 .. 0.88

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.065
     DUF4798 31 rkelsekekyyrHrrRYyqlmEKrlkaLgravskll 66
                ++e se++k +   +R   ++ K +  +g a++ ++
  EPX72553.1 13 KNEFSEEQKQFLAQSRARARRNKFIGVIGGALIPIV 48
                567788888888888888888888887777777665 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 1.4e-05
     DUF4798   6 satksneeektralpkaRksrkrparkelsekekyyrHrrRYyq 49 
                 s+++sn+e+++r+   +R+  k  +++++s+kek y   + Y+ 
  EPX72553.1 153 SQESSNQEDSSRS-AWDRIREKENINRTSSRKEKNYSFPSEYET 195
                 7788888888888.99********************99999875 PP

>> DUF4231  Protein of unknown function (DUF4231)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.2   4.1e-05      0.37      11      57 ..      25      70 ..      19     113 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 4.1e-05
     DUF4231 11 srakrrfrllrlitivlgallpilvssklgagvsvlkiltallsalv 57
                 ++++r+r+ ++i +++gal+pi+ + +++ ++++  ++t+++s ++
  EPX72553.1 25 AQSRARARRNKFIGVIGGALIPIVLA-QKRKVSPLKLYATSIISGIA 70
                5789999999****************.45555555555555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1207  (0.0673211); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 1954.29
//
Query:       EPX72554.1  [L=484]
Description: DNA binding factor Trf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-66  224.6   0.0      2e-66  224.0   0.0    1.2  1  TRF              Telomere repeat binding factor (TRF)
    1.4e-05   25.2   0.3    2.9e-05   24.2   0.3    1.6  1  Myb_DNA-binding  Myb-like DNA-binding domain
  ------ inclusion threshold ------
      0.017   15.4   0.0      0.037   14.3   0.0    1.6  1  Myb_DNA-bind_6   Myb-like DNA-binding domain


Domain annotation for each model (and alignments):
>> TRF  Telomere repeat binding factor (TRF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  224.0   0.0   3.3e-70     2e-66       3     228 ..      98     320 ..      96     332 .. 0.96

  Alignments for each domain:
  == domain 1  score: 224.0 bits;  conditional E-value: 3.3e-70
                 H...HHHHHHHHHHHHHHHHTHHHHHHHHHHH.TSHHHHHHHHHHHHCHCHCCCCHHHHHHHHHHHHHHSHHHHHHHHHHHHTTTHTTEECSSSTS-HH CS
         TRF   3 ksL.plLdnlstqllrllaespyqkilaivsepdsefgeafdtllslfertkklysekkpllspsilkkressiestlrkinlatfllsvlgtleigfl 100
                 +sL p+L nls+ +l++l + p+q+ +aiv++p se+g+af++l+s+f+++k++y+ ++++++p ++ +r++s++s +r++nla fl++v+g+l+igf+
  EPX72554.1  98 SSLvPTLANLSNIILSILGK-PVQEASAIVTNPASEMGMAFTKLMSMFRMIKDIYT-EDSFIYPAVISMRTPSQRSAVRRANLAIFLSAVYGALQIGFF 194
                 6777***************9.***********************************.888999************************************ PP

                 HHHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHSSSSTCCHH.........HHH..HHHHHTTHHHHHHHHHHHHHHH CS
         TRF 101 elaenfldifcpenelgkllkpqgvLyleLktqayisalkeaeerskeeiLddlfpddlediLlerrng...klltpsetdfverckkrkekLlniine 196
                 +l+enfl++f+p++   ++l++qg+Ly+eLktqayisa+  + er+ke+iL+dlfp+d+++++l rrn+   ++lt+ e+++ e+c +rke+L n++ +
  EPX72554.1 195 HLNENFLEVFAPDE--ANILTNQGTLYMELKTQAYISAM-AQAERPKEDILNDLFPSDMAHRFLLRRNAkldDKLTYVEKQILEKCAARKERLSNFTPQ 290
                 **************..***********************.*****************************9*9*************************** PP

                 TCCHHHHCS-HHHHHHHHHHHHHCCCHHHHHH CS
         TRF 197 kdkeLlqkyswesflkellsYvsknmsllvwg 228
                 ++  L + y w +fl+e+ +Y+++n s +   
  EPX72554.1 291 EA--LNEVYPWGKFLSEIACYIHNNHSSIAAI 320
                 *9..*********************9988765 PP

>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.3   4.8e-09   2.9e-05       1      45 [.     404     459 ..     404     460 .. 0.84

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 4.8e-09
                      CSSSBHHHHHHHHHHHHHHT.TCHHHHHHHHT.S.........S-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgkWteeEdelLleavkkhG.nrWkkIaerlg.g.........Rtekqcrsrwrny 45 
                      r  Wt+eE+e Ll+++ +    rW+ I+e +g g         R   q +++ rn+
       EPX72554.1 404 RRTWTKEEEEALLDGLDLVKgPRWSQILELYGpGgkknevlkhRNQVQLKDKARNM 459
                      678***************77799********9955788888777777777777775 PP

>> Myb_DNA-bind_6  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   6.1e-06     0.037       1      38 [.     407     455 ..     407     462 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 6.1e-06
  Myb_DNA-bind_6   1 WteeEdeiLlklveky.gndWknIaealn..........rRtpkqcfdr 38 
                     Wt+eE+e+Ll++     g  W++I e ++          +R++ q++d+
      EPX72554.1 407 WTKEEEEALLDGLDLVkGPRWSQILELYGpggkknevlkHRNQVQLKDK 455
                     ***************8567*****6666556666555557888777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (484 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       545  (0.0303977); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.23s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 3547.76
//
Query:       EPX72555.1  [L=411]
Description: transport complex subunit Cog5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.5e-28   99.6   1.1    4.1e-28   98.2   1.1    1.8  1  COG5             Golgi transport complex subunit 5
  ------ inclusion threshold ------
       0.17   11.3   2.3        0.6    9.5   0.4    2.4  2  DNA_primase_lrg  Eukaryotic and archaeal DNA primase, large s
       0.19   12.8   1.3        4.5    8.3   0.2    3.3  3  Myb_DNA-bind_3   Myb/SANT-like DNA-binding domain
       0.48   11.0   2.9         11    6.7   0.0    3.0  3  MCM_N            MCM N-terminal domain


Domain annotation for each model (and alignments):
>> COG5  Golgi transport complex subunit 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.2   1.1   9.2e-32   4.1e-28       1     132 []       8     139 ..       8     139 .. 0.99

  Alignments for each domain:
  == domain 1  score: 98.2 bits;  conditional E-value: 9.2e-32
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-TTHHHH CS
        COG5   1 eaFLepdFdpksfanallkatnnnddteldlstplkrlnydiqeldkrlrqlitsnhleLlehlskskslssvlselksslesLsasyerlkskvlepy 99 
                 ++++  dFdpk++a+++l ++++++dt +d +++ krl y+++e+d+++r  i sn+++L e +++  + +s l+e+++++++L+  yer++s ++ py
  EPX72555.1   8 SDYKGRDFDPKKQAKQVLASVHAATDTAEDKAVAKKRLGYALKEIDNQIRVFIGSNEQKLAESVESFFQNQSNLTEVREKMKQLTDIYERMRSLITVPY 106
                 579999********************************************************************************************* PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        COG5 100 eeaeklqsalkrlhqtldLlrralrflhlskqL 132
                 ++a+ l+ ++ +lh+t+  l++++rf+ l+kqL
  EPX72555.1 107 NSASPLHDSIVNLHSTYISLYWIHRFFDLQKQL 139
                 ********************************8 PP

>> DNA_primase_lrg  Eukaryotic and archaeal DNA primase, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.4   0.00013       0.6       8      79 ..      29      99 ..      22     116 .. 0.77
   2 ?    0.5   0.0     0.074   3.3e+02      26      81 ..     329     384 ..     309     405 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00013
                     HHHHHHTT-GGS-EE.TTEEEE-HHHHHHHHHHHHHHHHHH..........HHGGGSSS---HHHHHHHCT-- CS
  DNA_primase_lrg  8 edvldlvkrrrvllk.kGyaylpkeeleslllekfrkrlekalestkeslpeleeeikederekleelleals 79
                       ++d ++++ v  k  Gya+ ++++++++++   +++l++++es  +++++l+e+ +e+ + +l+++ e+++
       EPX72555.1 29 HAATDTAEDKAVAKKrLGYALKEIDNQIRVFIGSNEQKLAESVESFFQNQSNLTEV-REKMK-QLTDIYERMR 99
                     55566666666655526***********************************9555.44444.6999988887 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.074
                      EEE-HHHHHHHHHHHHHHHHHH..........HHGGGSSS---HHHHHHHCT--.. CS
  DNA_primase_lrg  26 aylpkeeleslllekfrkrlekalestkeslpeleeeikederekleellealses 81 
                      ++l+  +++ +  ++ +  ++++++++++++p l  ++++d+++ +  +++a+ +s
       EPX72555.1 329 FILDGATISMFYFKELAISISTKMQNLDRRDPTLLLVFRNDYQRVSHIVEQAIAKS 384
                      5677777778888999999999**********999999999998887777777733 PP

>> Myb_DNA-bind_3  Myb/SANT-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.55   2.5e+03      31      63 ..      18      50 ..      11      58 .. 0.84
   2 ?    8.3   0.2     0.001       4.5      29      73 ..      59     103 ..      47     109 .. 0.84
   3 ?    0.2   0.0      0.35   1.6e+03      40      77 ..     149     185 ..     141     188 .. 0.76

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.55
  Myb_DNA-bind_3 31 keawkeileefnaktgakytkkqlknrlkklrk 63
                    k++ k++l+++ a t++  +k + k+rl  + k
      EPX72555.1 18 KKQAKQVLASVHAATDTAEDKAVAKKRLGYALK 50
                    566799999999999999999999999877665 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.001
  Myb_DNA-bind_3  29 fkkeawkeileefnaktgakytkkqlknrlkklrkeyklvkelle 73 
                     f  +  ++++e+++++++++ + +++++++k+l + y+ +++l+ 
      EPX72555.1  59 FIGSNEQKLAESVESFFQNQSNLTEVREKMKQLTDIYERMRSLIT 103
                     566666889999999999***********************9986 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.35
  Myb_DNA-bind_3  40 efnaktgakytkkqlknrlkklrkeyklvkellersgf 77 
                     ef+++  +++    l + +++l  +y l+k+  + ++f
      EPX72555.1 149 EFERFE-NYFRAATLLQEMDQLLARYPLIKRQSSVQSF 185
                     555544.7888899999999999999999887666665 PP

>> MCM_N  MCM N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.2      0.45     2e+03       3      43 ..      70     106 ..      62     108 .. 0.72
   2 ?    2.9   0.1     0.037   1.7e+02      45      72 ..     134     161 ..     113     190 .. 0.78
   3 ?    6.7   0.0    0.0024        11      42      84 ..     351     393 ..     341     407 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.45
       MCM_N   3 kFedFLeefkddsededgekkYrdqlqemaerekttLevdl 43 
                 + e+F+++     ++  + +  ++ql +++er ++ ++v +
  EPX72555.1  70 SVESFFQNQ----SNLTEVREKMKQLTDIYERMRSLITVPY 106
                 567777776....4555566678888888888888888766 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.037
       MCM_N  45 dLaafdeeLaeailenpkeylplleeal 72 
                 dL++    La+++ ++ +++ +++++a+
  EPX72555.1 134 DLQKQLVALADSVPNEFERFENYFRAAT 161
                 34444449****************9986 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.0024
       MCM_N  42 dlddLaafdeeLaeailenpkeylplleealkevvkklepsyk 84 
                 ++++L   d++L    +++++++  + e+a+ +   ++  + +
  EPX72555.1 351 KMQNLDRRDPTLLLVFRNDYQRVSHIVEQAIAKSSSEIVTKDT 393
                 689****************************998877766544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (411 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1293  (0.0721178); expected 358.6 (0.02)
Passed bias filter:                      684  (0.0381505); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.30s 00:00:00.86 Elapsed: 00:00:00.44
# Mc/sec: 2801.40
//
Query:       EPX72556.1  [L=410]
Description: nucleoporin Nup44 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.8e-39  133.7   2.7    4.8e-39  133.7   2.7    2.0  2  Nup54           Nucleoporin complex subunit 54
  ------ inclusion threshold ------
          1    8.8   7.1       0.41   10.1   3.2    1.9  2  DegS            Sensor protein DegS


Domain annotation for each model (and alignments):
>> Nup54  Nucleoporin complex subunit 54
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.7   2.7   5.3e-43   4.8e-39       1     139 [.     202     338 ..     202     339 .. 0.98
   2 ?    1.5   0.1     0.034     3e+02      94     127 ..     373     406 ..     364     410 .] 0.82

  Alignments for each domain:
  == domain 1  score: 133.7 bits;  conditional E-value: 5.3e-43
                 --TT--HHHHHHHHHT-SST.TEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT CS
       Nup54   1 kpagvdeekWeeAleenPdpeklvPvpvkGFedLakRvkaQqkevaqhrerlkeisdrleeleqkhqletsvrlekakkrhvelshRllrllrkleilr 99 
                 kpa  +++kW+eA+ ++P+   +vPv+++GF d++kR+++Q ++v+++r r+ ei + le l +kh+l+   +l++ak+rh++ls+R+lrl+ k+++lr
  EPX72556.1 202 KPATHNQQKWDEAVANRPSN-SVVPVLAVGFPDVQKRMNMQINQVNAYRIRMREIVETLERLGNKHDLSSNIKLAEAKNRHIQLSERVLRLAIKVHVLR 299
                 68999*************87.8***************************************************************************** PP

                 T-SS---SSHHHHHHHHHHHHHHHS-HHH.HHHHHHHHHH CS
       Nup54 100 srgyaldaeEeelrarletleaqlndpaqlkgrvnelwar 139
                  rgyal+ +Ee lr+rl++l ++ln+p++  gr+ne+war
  EPX72556.1 300 HRGYALKSNEEDLRKRLDDLAKSLNNPEV-FGRLNEIWAR 338
                 *************************9888.9********8 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.034
                 HHHHHTT-SS---SSHHHHHHHHHHHHHHHS-HH CS
       Nup54  94 kleilrsrgyaldaeEeelrarletleaqlndpa 127
                  +++lr ++ +l+   + +++ l tl++ql+d++
  EPX72556.1 373 ITDVLRDHQNGLSYVAKLIQEDLGTLSKQLDDQT 406
                 5568899999999999999999999999999863 PP

>> DegS  Sensor protein DegS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   3.2   4.6e-05      0.41      30     117 ..     239     326 ..     233     344 .. 0.81
   2 ?    0.0   0.1      0.06   5.3e+02     131     154 ..     384     407 ..     369     410 .] 0.85

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 4.6e-05
        DegS  30 erlkkeleelkeevsevikevdklekke.rkarkrLaeVskdFkkyseeeikeaYeeakelqvelallrekEkqlrerRdelerrLkkl 117
                 +   ++++  + +++e++++ ++l +k+  ++  +Lae   +  + se  ++ a  +++ l+ +   l+++E++lr+r d+l ++L++ 
  EPX72556.1 239 NMQINQVNAYRIRMREIVETLERLGNKHdLSSNIKLAEAKNRHIQLSERVLRLA-IKVHVLRHRGYALKSNEEDLRKRLDDLAKSLNNP 326
                 4445666677788999999999997665157889**************999999.589****************************875 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.06
        DegS 131 vgvvlnyLsgdlkqvsekledlkq 154
                 ++ v +++++dl  +s++l+d  +
  EPX72556.1 384 LSYVAKLIQEDLGTLSKQLDDQTN 407
                 6789999**********9998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (410 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       992  (0.0553294); expected 358.6 (0.02)
Passed bias filter:                      550  (0.0306766); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 2861.63
//
Query:       EPX72557.1  [L=49]
Description: hypothetical protein SOCG_00320 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-12   46.6   0.0    2.9e-12   46.4   0.0    1.0  1  Tom5      Mitochondrial import receptor subunit or translocas
  ------ inclusion threshold ------
      0.079   11.8   0.0      0.082   11.7   0.0    1.0  1  DUF2079   Predicted membrane protein (DUF2079)


Domain annotation for each model (and alignments):
>> Tom5  Mitochondrial import receptor subunit or translocase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.4   0.0   3.2e-16   2.9e-12       1      47 []       1      46 [.       1      46 [. 0.95

  Alignments for each domain:
  == domain 1  score: 46.4 bits;  conditional E-value: 3.2e-16
        Tom5  1 MFgg.gPpqpSeeEikaaeaeArqtvknfaaaaalLylsPfvidfvkk 47
                MF+g g p  S+e++k+  + A +++k+ a +aa L l+Pfvi+fvk+
  EPX72557.1  1 MFAGsGRP--SKEQVKQYDNLAISEIKKGASVAAILALTPFVISFVKN 46
                ***77777..************************************95 PP

>> DUF2079  Predicted membrane protein (DUF2079)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   9.2e-06     0.082     358     388 ..       9      40 ..       4      47 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 9.2e-06
     DUF2079 358 tlaqlqas.rellklIpsdasvlatsnLaPhl 388
                 + +q++++ + ++++I+++asv+a+  L+P++
  EPX72557.1   9 SKEQVKQYdNLAISEIKKGASVAAILALTPFV 40 
                 567788888889******************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (49 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       458  (0.0255452); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.27s 00:00:00.65 Elapsed: 00:00:00.44
# Mc/sec: 336.69
//
Query:       EPX72558.1  [L=419]
Description: transcription elongation factor complex subunit Iws1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.2e-11   42.7   0.0    4.2e-11   42.7   0.0    2.6  3  Med26     TFIIS helical bundle-like domain


Domain annotation for each model (and alignments):
>> Med26  TFIIS helical bundle-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.7   0.0   2.4e-15   4.2e-11       2      53 .]     257     308 ..     256     308 .. 0.94
   2 ?   -2.2   0.1      0.25   4.5e+03      18      25 ..     349     356 ..     349     356 .. 0.89
   3 ?   -3.8   0.1      0.77   1.4e+04      32      41 ..     386     395 ..     383     403 .. 0.66

  Alignments for each domain:
  == domain 1  score: 42.7 bits;  conditional E-value: 2.4e-15
                 HHHHS---....HHHHHHSHHHHHHHHHH-TTS-HHHHHHHHHHHHHHHHHH CS
       Med26   2 iLaqLeklpittetLkstgIGkvVnalrkhkhetaevktlAksLvekWkkav 53 
                 +L+ L klpi te+L++++IG+v+ +++ +k++++ +k+ A +Lv++W++++
  EPX72558.1 257 LLDILTKLPIETEHLRESKIGRVILFYTISKKPEPFIKRIADRLVSEWSRPI 308
                 789999**9*******************77888*****************97 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.25
                 HHSHHHHH CS
       Med26  18 stgIGkvV 25 
                 +++IG++V
  EPX72558.1 349 TSRIGRTV 356
                 59*****9 PP

  == domain 3  score: -3.8 bits;  conditional E-value: 0.77
                 TTS-HHHHHH CS
       Med26  32 khetaevktl 41 
                 + +t++v++l
  EPX72558.1 386 PADTEQVRKL 395
                 4556777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (419 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       907  (0.0505884); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 2879.07
//
Query:       EPX72559.1  [L=474]
Description: translocon subunit Sec61 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.9e-30  106.2  18.6    2.5e-30  105.8  18.6    1.1  1  SecY             SecY translocase
    4.9e-06   26.3   1.1     0.0006   19.6   0.0    3.7  3  Plug_translocon  Plug domain of Sec61p
  ------ inclusion threshold ------
       0.12   12.3   0.1       0.24   11.3   0.1    1.4  1  HPIH             N-terminal domain with HPIH motif


Domain annotation for each model (and alignments):
>> SecY  SecY translocase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.8  18.6   4.2e-34   2.5e-30       5     286 ..      80     445 ..      77     462 .. 0.77

  Alignments for each domain:
  == domain 1  score: 105.8 bits;  conditional E-value: 4.2e-34
                 STCHHHHHHHHHHHHHHHHSSSSSSTS.-S.SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC..........HH.HHHHHHHHHHHHHHHHHHHHHHH CS
        SecY   5 LGImPyitasIilqLltvvipkleelk.ke.geegrkkinqitryltvvlalvqalgialslg..........lalllivlqltagtvllmwLgEqite 91 
                  G+ P+i +  ++qLl++     ++++ +    ++r  +++++++++ +l l+ ++++++s g          + +l+ ++ql++ ++++++L+E +++
  EPX72559.1  80 TGLAPIIFSAFLMQLLAA----GRKIAvNFnLISDRIMFQNTQKVFSAFLYLLFSITFVVS-GyygpvselgvALTLIFIVQLFIPGIICIYLCEIVEK 173
                 5999************66....366666666899**********************98866.4689******9668999******************** PP

                 .HSSTTHHHHHHHHHHHHHHC.CHSS..................-HHHH............SS........THHHHHHHHHHHHHHHHHCHHHHBEEEE CS
        SecY  92 .kGiGnGisllifagivarlp.kals..................gliel............ale......gilallllllvtllvillvvyveeaerri 152
                  +G+G+G  ll++  iv++l+ + ls                  g   l            a        +   +++ ll+++  +l+ +y+ ++++ i
  EPX72559.1 174 gYGMGSGPVLLLASHIVSSLFwQILSfnryqlteeisqyegtlvG---LvfslfsykdkfyA-LrsiffrTDRLNVFSLLACISAFLAFIYLLSMRIDI 268
                 *********************555557777666655555544441...14444444444441.04344442248999999******************* PP

                 CBBBS.TT....S.S-EEEEETTCCCSCHHHHHHHHHH............HHHCCCCS.......................................TC CS
        SecY 153 pvqya.krgrkggqssylPlklnyagviPiIfasslla............lpstiaqfl......................................la 200
                  ++++  r    g ++++Plkl+y+++ P +f  s+++            +                                              + 
  EPX72559.1 269 SIRSSrVR----GFRQNFPLKLFYTSISPFLFIFSFVShllvlayfihsmF-------PnsvftrflvqytkyethpiqqlrltgglfyyfvpplsiW- 355
                 ***99666....99************************6665555555553.......0333344467777777777777666666666665554332. PP

                 CCS..THHHHHHHHHHHHHH....HHHHHHTCT.THHHHHHHCCHHTBSSSCTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS. CS
        SecY 201 lls..psvlyvvlyvlliif....Fayfyteit.fnpkevaenlkksggfipgirpgketakyLekvlsritliGalflaliavlpdllgasl 286
                   +  + ++++++yv+l++     ++  +t+ t + p++v   +k+++  + g+r+  ++ k+Lek+++ ++  +al+++ +++l+ +  +++
  EPX72559.1 356 --EtiTCPIHTLVYVVLLFStslyISLAWTKATgSGPRDVLAFFKENQLIMAGFRE-VSMLKELEKIVPSAARSSALVMSSLCLLAGITASTF 445
                 ..1343345666666666666666*******************************7.7999*************************9999843 PP

>> Plug_translocon  Plug domain of Sec61p
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0     1e-07    0.0006       1      33 [.      41      73 ..      41      74 .. 0.96
   2 ?    2.6   0.1      0.02   1.2e+02      18      30 ..     225     237 ..     215     237 .. 0.72
   3 ?   -0.2   0.1      0.16   9.4e+02      18      33 ..     452     467 ..     437     468 .. 0.76

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 1e-07
                     HHHHHHCCSB-TT--SSS-TCCHTTTCCCCTSS CS
  Plug_translocon  1 llYlvlsqiPLyGissssssDpfywlRaifAsn 33
                     ++Y vl + P+yG+++ +  Dp+  +R++ +s+
       EPX72559.1 41 VIYQVLLNMPVYGVPKREFVDPINAWRVLDGSS 73
                     79*************99************9998 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.02
                      S-TCCHTTTCCCC CS
  Plug_translocon  18 sssDpfywlRaif 30 
                      s +D fy lR+if
       EPX72559.1 225 SYKDKFYALRSIF 237
                      66899*******9 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.16
                      S-TCCHTTTCCCCTSS CS
  Plug_translocon  18 sssDpfywlRaifAsn 33 
                      +s+  f+ + ++++sn
       EPX72559.1 452 ASALVFASFEVVMGSN 467
                      4556788999999998 PP

>> HPIH  N-terminal domain with HPIH motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1     4e-05      0.24      15      35 ..     359     380 ..     350     398 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 4e-05
        HPIH  15 khPIhtIvvvallastt.Ylsv 35 
                 + PIht+v v+ll+st+ Y+s+
  EPX72559.1 359 TCPIHTLVYVVLLFSTSlYISL 380
                 56*****988877776549887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (474 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       686  (0.038262); expected 358.6 (0.02)
Passed bias filter:                      270  (0.0150594); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 3288.36
//
Query:       EPX72560.1  [L=352]
Description: Svf1 family protein Svf2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-25   89.8   0.0    2.4e-25   89.2   0.0    1.2  1  Svf1_C    Svf1-like C-terminal lipocalin-like domain
    1.8e-13   50.8   0.2      3e-13   50.1   0.2    1.3  1  Svf1      Svf1-like N-terminal lipocalin domain
  ------ inclusion threshold ------
      0.027   14.8   0.0        4.1    7.7   0.0    2.3  2  DUF4361   Domain of unknown function (DUF4361)


Domain annotation for each model (and alignments):
>> Svf1_C  Svf1-like C-terminal lipocalin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.2   0.0   4.1e-29   2.4e-25       2     164 ..     188     348 ..     187     349 .. 0.93

  Alignments for each domain:
  == domain 1  score: 89.2 bits;  conditional E-value: 4.1e-29
      Svf1_C   2 kpnhaAksW.nflnFqse.kvsavlmeFttpksygntkvsigiivkddkilavtvdnkvehleaklDeetgwkvPksiklelkgkksevkdeeveakle 98 
                 k+++++++W n l F+ + k+ ++++++   +  + t  s+++++ ddk++av  +n+++ + +++ e ++++ P++i   l+g+++  +d+ ++++l 
  EPX72560.1 188 KFTNLGHTWqNSLLFDDSkKNVLTCLHYFPRN-SEDTFRSQASLTLDDKLVAVLLKNEYSTNGSSQVEGVRYQLPTHIDRVLTGSTL--DDKPIRVHLA 283
                 56788999*999***86538888899988655.5999*****************************999****************99..6669****** PP

      Svf1_C  99 adleelvervDvlaeiPqfvkkivsgvagtkPYiYqylnkkelklkvedeeevkekGllfaEatfi 164
                  dlee+   +Dvl+ +P++ k+ivs +ag  PY++ +l++ ++++ ++d+ + + +G+ ++E+t++
  EPX72560.1 284 SDLEEVQSITDVLNIFPKWAKDIVSIWAGL-PYVFVWLQRLKADVYIDDQLVSTLSGCHYVEQTCV 348
                 *****************************9.*********************************98 PP

>> Svf1  Svf1-like N-terminal lipocalin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.1   0.2   5.1e-17     3e-13       2     163 ..      33     183 ..      32     184 .. 0.78

  Alignments for each domain:
  == domain 1  score: 50.1 bits;  conditional E-value: 5.1e-17
        Svf1   2 EtqtfYftdldggivgfvQiiySnviG.lyktaqftfkif.dskekkek.nlWkstkl.enfeidkasfyadnlsielk..neegeqykikssvnkelk 94 
                 ++++fY++ +dg ++g++Q+ y n+ G + k a + + ++ +++e+ ++  + +st l  n+++       d++s++++    + +  + +++v++e +
  EPX72560.1  33 QYKSFYMCFDDG-SFGYIQFAYGNL-GlFVKVAPLGWTYYpSKDEPLQEpIISSSTYLyRNMKV-----SKDRYSVDVHkhFMHFDVNSQNWRVRIEGM 124
                 6789*******9.************.7699**********555554444555666666234444.....667777777532123344556788999*** PP

        Svf1  95 vdltvtrlapGfklgedgttyfgddieepwgsmrHvfwPrnkveGtivlkkedkkieftgelglfvdAl 163
                 +dlt++++++Gf l +     fg+  ++  g+m+H+++P  +++G+++++  +++ ++tg+ ++f+dA+
  EPX72560.1 125 YDLTIQMKDNGFGLTD-----FGQ--KNLGGYMEHKIFPVSSLKGSVTAH--GTTRDVTGT-AVFIDAM 183
                 ****999999996666.....776..58899******************9..99******6.******8 PP

>> DUF4361  Domain of unknown function (DUF4361)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0    0.0056        33      52     102 ..      87     139 ..      68     159 .. 0.73
   2 ?    7.7   0.0   0.00068       4.1       4      29 ..     236     263 ..     233     294 .. 0.74

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.0056
                 EEESTT--TT-TTGGGGEEE.....EEEES...EEEEE-TT.TT-EE--..-EEE CS
     DUF4361  52 rfyagnedeedtkrakykinknsiiltvnedn.tvtlkpyn.ikveqlk..asye 102
                 ++y  ++   +++r++ ++ k+ + + vn  n  v ++++  + +++ +  + ++
  EPX72560.1  87 YLYRNMKV--SKDRYSVDVHKHFMHFDVNSQNwRVRIEGMYdLTIQMKDngFGLT 139
                 45544444..47788999************9977***999885555544335554 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.00068
                 EEEEEEE-TT-E..EEE-TTEEEE..EE CS
     DUF4361   4 LlrvnlkNdYsg..tYsmtglriklgts 29 
                 L+ v+lkN+Ys+  + ++ g+r++l+t 
  EPX72560.1 236 LVAVLLKNEYSTngSSQVEGVRYQLPTH 263
                 899********87789999999996554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (352 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       408  (0.0227564); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.29s 00:00:00.76 Elapsed: 00:00:00.45
# Mc/sec: 2328.50
//
Query:       EPX72561.1  [L=610]
Description: ER protein translocation subcomplex subunit Sec63 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.5e-15   57.0   0.2    2.9e-15   56.1   0.2    1.5  1  DnaJ         DnaJ domain
    2.4e-11   43.3   0.5    1.3e-09   37.7   1.0    2.7  2  Sec63        Sec63 Brl domain
  ------ inclusion threshold ------
       0.14   12.2   0.0          5    7.3   0.0    2.4  2  P_C10        Protein C10
       0.28   10.9   2.0       0.52   10.1   0.1    2.4  3  ISK_Channel  Slow voltage-gated potassium channel


Domain annotation for each model (and alignments):
>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.1   0.2   6.6e-19   2.9e-15       1      62 [.      98     164 ..      98     164 .. 0.89

  Alignments for each domain:
  == domain 1  score: 56.1 bits;  conditional E-value: 6.6e-19
                 HHHHHHTSSTTG-HHHHHHHHHHHHHHHSTT..TS...CCHHHHHHHHHHHHHHHHHHTSHHHHHHH CS
        DnaJ   1 dyYeiLgvskdasedeIkkaYrklalkyHPD..kn...pkdpeaeekFkeineAyevLsdpekRkqY 62 
                 d+YeiLg++k++  d+I++ Y++l++k+HPD  +n   +  +e e ++ e+++Ay  L+d+e R++Y
  EPX72561.1  98 DPYEILGIPKNMAVDDIRRHYKRLSIKFHPDkiRNlgnTTREEVEANYIELTTAYRALTDEETRENY 164
                 78*****************************654554355559999*******************99 PP

>> Sec63  Sec63 Brl domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.1   0.00037       1.6      17      45 ..     230     258 ..     225     262 .. 0.85
   2 !   37.7   1.0   2.8e-13   1.3e-09      55     252 ..     246     538 ..     237     543 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.00037
                 HHHHHHHHS-TT--HHHHHHHHHTSGGGG CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       Sec63  17 tiklfneslkpnttlkdlLeilssasEFe 45 
                 +++    ++++n +++d+L++l+s++EF+
  EPX72561.1 230 SVDAWFPKIHENLEMEDILQLLASSKEFQ 258
                 5555666899******************7 PP

  == domain 2  score: 37.7 bits;  conditional E-value: 2.8e-13
                 HHHHHHHHTSSS--SSSTTSHHHHHHHHHHHHHTT---SSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHHHHTS-TT........ CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........ RF
       Sec63  55 kelkkLlekvpikvkediespeaKvniLlqayisrlklegsdlvsDlkyilqnairilralveillskgwlslalslleLskmveqrlwds........ 145
                 ++l+ L+++ +++++++ e +++ v  Llq ++ r + +    +  ++  l++   +++alv ++++ g ++++ ++++L + ++q++           
  EPX72561.1 246 DILQLLASSKEFQISSSPEASKTVVVQLLQNHLHRKEKS----NLNMQRLLSETDLVMNALVSVISAYGFSKPTDNVFKLWQHIVQAIPLElplpllql 340
                 678888888899999*******************99866....6779999***************************************888******* PP

                 .......................................................................................S--EEEEEEECE CS
                 .......................................................................................xxxxxxxxxxxx RF
       Sec63 146 .......................................................................................lPkleieaevqp 157
                                                                                                        +P++++e + ++
  EPX72561.1 341 phlsvedakkfasrgithipqflqlkkekglsgysseqiqemveianniprisvldskvlvdgddfvttgaianfilrlkcsygeeiMPEVSVEGTETA 439
                 *********************************************************************************************887766 PP

                 BTTSEEE.EEEEEEESSS....S-S......CTSSS-CHTSBEEEEEEEEETTTTEEEEEEEEEESSTTTTTEEEEEEEEEEE-.SSCCEEEEEEEEES CS
                 xxxxxxx.xxxxxxxxxx....xxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       Sec63 158 itrsklr.vevtiereee....esk......pdfpwdkkgksekfwlvvedsendellaikrvtlekkklastqevkleftvplsepgpkqltvrlisd 245
                 + ++k+   +v+ e+++     e        p f+++    + ++w+ v d+ +++++ i  +++++   +++ + ++ f+vp++e    ++  +++s 
  EPX72561.1 440 TEQDKIDaERVHMEKDVVlgdlE-VlphawsPYFTQSH---KTAWWVYVVDPRQNRVI-IPPFSITD-IPRTERTIRIPFQVPPVEG-TFKFQTHIVSN 531
                 66666664456666555564431.14445889999999...************99987.56678865.5666899*******99775.*********** PP

                 SSSS-EE CS
                 xxxxxxx RF
       Sec63 246 swlgldq 252
                 s+lg d 
  EPX72561.1 532 SYLGEDI 538
                 ***9875 PP

>> P_C10  Protein C10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.0    0.0011         5      45      76 ..     295     326 ..     269     329 .. 0.78
   2 ?    2.1   0.0     0.047   2.1e+02      33      70 ..     534     571 ..     526     583 .. 0.89

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0011
       P_C10  45 lPvvvqiqmevikkyGFaedreGvvkfaqlvr 76 
                   +v++  ++vi++yGF++  + v k  q + 
  EPX72561.1 295 TDLVMNALVSVISAYGFSKPTDNVFKLWQHIV 326
                 45899999***********9999999888775 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.047
       P_C10  33 agndmlkvmqlvlPvvvqiqmevikkyGFaedreGvvk 70 
                  g+d++  + +v+  ++ iq  +i++  F+++++G+v 
  EPX72561.1 534 LGEDIVSNLTVVVKDAATIQDTIIEDDEFSDGEDGLVD 571
                 68999999999999*********************984 PP

>> ISK_Channel  Slow voltage-gated potassium channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.1   0.00012      0.52      32      89 ..       7      65 ..       1      73 [. 0.77
   2 ?   -1.3   0.1      0.39   1.7e+03      45      62 ..     194     210 ..     191     226 .. 0.81
   3 ?   -3.1   0.0       1.3   5.9e+03       9      30 ..     267     288 ..     261     311 .. 0.55

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00012
  ISK_Channel 32 rseddklevlyillll.gffgfftlGimlsyirskklehshdPynvyiesdaWqkkdka 89
                  +e++++  +++l+ + +f   +t+  ++  + +kk     dP+  y  +d+ +kk+ +
   EPX72561.1  7 YDEQGQFFPVFLLVAVsCFIIPMTFSSLFGQVSTKKNGSVSDPFAAYRPKDIKKKKESK 65
                 45566666677777651555679****************************99888865 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.39
  ISK_Channel  45 lllgffgfftlGimlsyi 62 
                   +lgf+g++ +Gi l y 
   EPX72561.1 194 YVLGFYGLI-FGIFLPYS 210
                  589999975.89999885 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 1.3
  ISK_Channel   9 tlfLsklleelveqgnssssla 30 
                  + ++ +ll+++++++++s    
   EPX72561.1 267 KTVVVQLLQNHLHRKEKSNLNM 288
                  5556677777777555443332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (610 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       816  (0.0455129); expected 358.6 (0.02)
Passed bias filter:                      611  (0.0340789); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.65u 0.29s 00:00:00.94 Elapsed: 00:00:00.44
# Mc/sec: 4178.95
//
Query:       EPX72562.1  [L=399]
Description: tRNA dihydrouridine synthase Dus1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.9e-67  226.2   0.0    5.8e-67  226.0   0.0    1.1  1  Dus       Dihydrouridine synthase (Dus)


Domain annotation for each model (and alignments):
>> Dus  Dihydrouridine synthase (Dus)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  226.0   0.0   3.2e-71   5.8e-67       1     241 [.      23     265 ..      23     333 .. 0.87

  Alignments for each domain:
  == domain 1  score: 226.0 bits;  conditional E-value: 3.2e-71
                 EE---TTTS-HHHHHHHHHTT-SSEEEEEEEE-SSS---HHHHHHH-GGGGGT..SCEEEEEE-S-HHHHHHHHHHHHHTT-SCEEEEESSTTEEETTE CS
         Dus   1 llaPmagvtdlpfRelvrefgataLvvtemvtakaivreekvrirmlseeeee..tplavQlggsdpallaeaAklvadlgadeIdlNvGCPskkvtrg 97 
                 +laPm+++++lp+R l r+ ga+ L++++m +++ + ++e++r + +s+ + +  +pl++Q++g+dp+ +++aA+l+++ ++d++dlN+GCP+  +++g
  EPX72562.1  23 ILAPMVDQSELPWRILARRSGAD-LCYSPMFHSRLFSESEDYRGKVFSTRDIPeeKPLIIQFCGNDPEIMLKAAQLAVP-YCDAVDLNLGCPQGIAKKG 119
                 59*********************.******************99998887644449***********************.******************* PP

                 EEGGGGGGSHHHHHHHHHHHHCCSSS-EEEEEESESSTTTC.HHHHHHHHHHCT-SEEEEESSECCCTT-C..G--CHHHHHHHHH-S..S-EEEESS- CS
         Dus  98 gaGaaLlrkpdlvaqivkavvkaveiPvtvkirigiddeeenalelakiveaaGaqaltvHgRtraqnyeg..tadweaIkevkqavs..ipviaNGdI 192
                 ++G++L +++ l+++i+k++++ ++iPvt+kiri+ d   +++le+ak++ +aGa +l+vHgR r+q+ +    adwe+I+ ++++++  ++++aNG+I
  EPX72562.1 120 KYGSFLQENWPLIESIIKKLHEELPIPVTAKIRIFPD--PKKTLEYAKMILNAGASFLAVHGRFREQKGQFtgVADWEQISMLRKSLPsdTVLFANGNI 216
                 *************************************..5667********************99999876669************************* PP

                 -SHHHHHHHHHHH--SEEEESCHHCCSTTHHHHHHHHHHSC------.HH CS
         Dus 193 kdaedaqaileetGadgvmigrgalgnPwlfaestavktgeaepapp.la 241
                  +  d+++++e tG+dgvm ++g+l+nP +f  s  +  ++  p+   ++
  EPX72562.1 217 LHSCDIDRCIEATGVDGVMSAEGSLYNPKIFLPS-NSPMNILYPRVDdIC 265
                 ******************************9633.333334433333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (399 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       443  (0.0247086); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 2983.29
//
Query:       EPX72563.1  [L=277]
Description: ubiquitin-protein ligase E/phosphatidylinositol(3)-phosphate binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.6e-19   69.1  12.1    2.6e-19   69.1  12.1    2.8  3  FYVE         FYVE zinc finger
    3.1e-06   27.4   2.6    3.1e-06   27.4   2.6    4.7  5  zf-RING_2    Ring finger domain
       0.01   15.6   5.4       0.01   15.6   5.4    2.9  3  zf-RING_11   RING-like zinc finger
  ------ inclusion threshold ------
       0.34   10.9  31.6       0.18   11.7   4.8    4.7  5  Prok-RING_1  Prokaryotic RING finger family 1


Domain annotation for each model (and alignments):
>> FYVE  FYVE zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.1  12.1   5.8e-23   2.6e-19       2      67 ..      23     118 ..      22     119 .. 0.79
   2 ?   -0.3   0.4      0.27   1.2e+03       8      31 ..     169     193 ..     161     196 .. 0.54
   3 ?   -1.9   2.2      0.84   3.8e+03      10      21 ..     228     239 ..     222     263 .. 0.70

  Alignments for each domain:
  == domain 1  score: 69.1 bits;  conditional E-value: 5.8e-23
                 ---...--SB-TTT--B--SSS--EE-TTT--EE-STTS-EEE.EE..............................GGGTEEEEE.......EE-HHHH CS
        FYVE   2 kwkddsevkkCeiCakkFsllrrrhhCrlCGkvvCekCssklvall..............................ekeaeeksv.......rvCkeCl 63 
                 +w+ d++v +C++C ++F+++rr+hhCr+CGkv+C++Cs+ +++l+                              +       +       rvC++C+
  EPX72563.1  23 EWQADEDVVSCTQCGSSFNWFRRKHHCRWCGKVYCANCSNYTSELPsvsvstdssnrlmlfdeefdgveddvtntcQ-------TepmwctvRVCENCF 114
                 7**************************************99999997666666666666666666666555554444.......04445555******* PP

                 HHHH CS
        FYVE  64 aels 67 
                 ++ls
  EPX72563.1 115 HQLS 118
                 *987 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.27
                 --SB-TTT--B-.-SSS--EE-TTT CS
        FYVE   8 evkkCeiCakkF.sllrrrhhCrlC 31 
                 e++ C i  +kF s  +r  h   C
  EPX72563.1 169 ECPVCYIALSKFkSQEEREEHIASC 193
                 3444555556663344666665555 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 0.84
                 SB-TTT--B--S CS
        FYVE  10 kkCeiCakkFsl 21 
                 ++C  C ++Fs 
  EPX72563.1 228 EECIVCFEEFSP 239
                 579999999974 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   3.7      0.38   1.7e+03      17      43 ..      31      52 ..      23      52 .. 0.64
   2 ?    1.1   7.4      0.11   5.1e+02       2      30 ..      32      61 ..      31      68 .. 0.68
   3 ?    3.1   1.2     0.028   1.3e+02      16      32 ..      98     116 ..      90     132 .. 0.66
   4 ?    3.1   0.2     0.028   1.3e+02       2       9 ..     169     176 ..     162     195 .. 0.71
   5 !   27.4   2.6   6.9e-10   3.1e-06       2      42 ..     229     271 ..     228     271 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.38
   zf-RING_2 17 lll.pCgHvfhreClerwlrssstCPlC 43
                + + +Cg +f      +w+r++++C  C
  EPX72563.1 31 VSCtQCGSSF------NWFRRKHHCRWC 52
                3332555555......799999999877 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.11
   zf-RING_2  2 eCpICleel...ssadsvlllpCgHvfhreCl 30
                +C+ C +++    ++++++   Cg+v++ +C 
  EPX72563.1 32 SCTQCGSSFnwfRRKHHCR--WCGKVYCANCS 61
                5888877774324444444..4*********6 PP

  == domain 3  score: 3.1 bits;  conditional E-value: 0.028
   zf-RING_2  16 vlllp..CgHvfhreCler 32 
                 ++++p  C    +++C+ +
  EPX72563.1  98 CQTEPmwCTVRVCENCFHQ 116
                 3433344755577777766 PP

  == domain 4  score: 3.1 bits;  conditional E-value: 0.028
   zf-RING_2   2 eCpIClee 9  
                 eCp+C+ +
  EPX72563.1 169 ECPVCYIA 176
                 68888643 PP

  == domain 5  score: 27.4 bits;  conditional E-value: 6.9e-10
   zf-RING_2   2 eCpICleelssadsvl.llpCgHvfhreClerwlrssst.CPl 42 
                 eC +C+ee+s++d+v  ++ C  +fh +C ++wl +    CP+
  EPX72563.1 229 ECIVCFEEFSPGDKVArIEYCLCMFHLKCYRDWLSTGAAgCPV 271
                 9*************8845579656**********99988**96 PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.2       2.3     1e+04      20      25 ..     110     115 ..     106     116 .. 0.59
   2 ?   -0.0   0.4      0.17   7.7e+02       1      12 [.     169     183 ..     169     193 .. 0.57
   3 !   15.6   5.4   2.2e-06      0.01       1      28 [.     229     257 ..     229     258 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 2.3
  zf-RING_11  20 CsHtFH 25 
                 C  +FH
  EPX72563.1 110 CENCFH 115
                 444566 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.17
  zf-RING_11   1 eCsIC...Leefkpg 12 
                 eC +C   L++fk  
  EPX72563.1 169 ECPVCyiaLSKFKSQ 183
                 687873335666654 PP

  == domain 3  score: 15.6 bits;  conditional E-value: 2.2e-06
  zf-RING_11   1 eCsICLeefkpgqal.filpCsHtFHfkC 28 
                 eC +C eef pg+++ +i  C  +FH+kC
  EPX72563.1 229 ECIVCFEEFSPGDKVaRIEYCLCMFHLKC 257
                 9************9967878********* PP

>> Prok-RING_1  Prokaryotic RING finger family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   1.0   5.4e-05      0.24      14      30 ..      24      40 ..      20      51 .. 0.85
   2 ?   -1.9   2.6      0.76   3.4e+03      23      34 ..      49      60 ..      44      66 .. 0.60
   3 ?   -2.7   0.1       1.3   5.9e+03      22      26 ..     109     113 ..     106     119 .. 0.57
   4 ?    5.7   0.4    0.0031        14      15      26 ..     162     173 ..     158     177 .. 0.86
   5 ?   11.7   4.8   4.1e-05      0.18       4      36 ..     227     259 ..     225     270 .. 0.94

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 5.4e-05
  Prok-RING_1 14 lkeedDiVvCpeCgtpy 30
                  + ++D+V C++Cg+++
   EPX72563.1 24 WQADEDVVSCTQCGSSF 40
                 57899*********986 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.76
  Prok-RING_1 23 CpeCgtpyHraC 34
                 C  Cg +y  +C
   EPX72563.1 49 CRWCGKVYCANC 60
                 555555555555 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 1.3
  Prok-RING_1  22 vCpeC 26 
                  vC +C
   EPX72563.1 109 VCENC 113
                  44444 PP

  == domain 4  score: 5.7 bits;  conditional E-value: 0.0031
  Prok-RING_1  15 keedDiVvCpeC 26 
                  ++ dD+V Cp+C
   EPX72563.1 162 HNSDDMVECPVC 173
                  5679******** PP

  == domain 5  score: 11.7 bits;  conditional E-value: 4.1e-05
  Prok-RING_1   4 gkkCpvCgkelkeedDiVvCpeCgtpyHraCye 36 
                  g++C vC +e++++d +     C   +H +Cy+
   EPX72563.1 227 GEECIVCFEEFSPGDKVARIEYCLCMFHLKCYR 259
                  899*****************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (277 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       745  (0.0415528); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 1794.93
//
Query:       EPX72564.1  [L=174]
Description: hypothetical protein SOCG_00327 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.07   12.9   7.0        1.3    8.9   4.1    2.9  2  Nsp1_C      Nsp1-like C-terminal region
       0.11   12.6   2.7       0.23   11.5   0.0    2.6  3  G-gamma     GGL domain
       0.13   12.2   1.2        1.2    9.0   0.0    2.4  3  Ham1p_like  Ham1 family
       0.14   12.1   3.2       0.12   12.3   0.9    2.0  2  ApoO        Apolipoprotein O
       0.21   11.7   6.3        1.8    8.7   0.2    2.2  2  DUF1517     Protein of unknown function (DUF1517)
        1.3    9.4   5.9         27    5.1   0.4    3.1  3  WXG100      Proteins of 100 residues with WXG
        3.9    7.7   7.8       0.24   11.6   1.2    2.3  3  XhlA        Haemolysin XhlA
        4.3    7.7  12.9       0.65   10.3   8.5    1.8  2  SirA        Sporulation inhibitor of replication protein SirA


Domain annotation for each model (and alignments):
>> Nsp1_C  Nsp1-like C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   4.1   0.00058       1.3      16      43 ..      20      47 ..      10     124 .. 0.74
   2 ?    3.9   0.1      0.02        45      16      41 ..     126     151 ..     114     161 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00058
      Nsp1_C 16 knktldelinkWtteLeeqekeFeeqak 43
                +nk++ +lin+ +teL++ + +F +qa 
  EPX72564.1 20 SNKKMSNLINQLQTELSNRHATFVSQAV 47
                79************************94 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.02
      Nsp1_C  16 knktldelinkWtteLeeqekeFeeq 41 
                 +   l+e +n+++ + ++ +k F+e+
  EPX72564.1 126 TLLDLEERVNRFQVSVKNHSKAFQEK 151
                 55679******************986 PP

>> G-gamma  GGL domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0    0.0001      0.23       4      34 ..      21      52 ..      18      58 .. 0.86
   2 ?   -2.0   0.0       1.7   3.7e+03       8      26 ..     121     140 ..     116     150 .. 0.52
   3 ?   -0.2   0.4      0.45     1e+03       4      25 ..     149     161 ..     138     171 .. 0.64

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.0001
     G-gamma  4 klklkreieqLkkeLkr.erikvSkAceelid 34
                ++k+++ i+qL+ eL+  +   vS+A++++++
  EPX72564.1 21 NKKMSNLINQLQTELSNrHATFVSQAVLSFNK 52
                6799999**********66669*****99876 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 1.7
     G-gamma   8 krei.eqLkkeLkrerikvS 26 
                 ++e  + L  e   +r +vS
  EPX72564.1 121 SQENcTLLDLEERVNRFQVS 140
                 44443333333333444444 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.45
     G-gamma   4 klklkreieqLkkeLkrerikv 25 
                 ++klkr +e+Lk          
  EPX72564.1 149 QEKLKRSMEKLK---------S 161
                 345555555555.........4 PP

>> Ham1p_like  Ham1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.0   0.00053       1.2      89     136 ..      18      65 ..       8      78 .. 0.68
   2 ?    1.6   0.2       0.1   2.3e+02       7      43 ..      78     122 ..      75     147 .. 0.60
   3 ?   -1.9   0.0       1.2   2.6e+03      88     111 ..     145     166 ..     133     169 .. 0.54

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00053
                 CHHHHHHHHHHHHCTHTT.S--EEEEEEEEEEEETTTTEEEEEEEEEEE CS
  Ham1p_like  89 aedeenlaklleeleeee.edrsArfvcvlaladpeeeeellfeGeveG 136
                 +++++++ +l+++l+  e ++r+A+fv+  +l+ ++++  +l + ++eG
  EPX72564.1  18 NSSNKKMSNLINQLQT-ElSNRHATFVSQAVLSFNKHHDRVLQSYIIEG 65 
                 3447899999999984.4599********99998844443333333444 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.1
                 -HHHHHHHHHHTTT.......ECCCE.EECCC.......CEE----BSSSH CS
  Ham1p_like   7 NkgKlrevkeilae.......ellevkslkel.......elpeveEtqgtf 43 
                 N+ Kl+ +++++++              l+e+       +  ++eE++ + 
  EPX72564.1  78 NQLKLQNIQKLYQDasktlflL------LSEYeqvsteiHGLDIEEEKLSQ 122
                 99999**999988854433331......22221112223444444554444 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 1.2
                 TCHHHHHHHHHHHHCTHTTS--EE CS
  Ham1p_like  88 gaedeenlaklleeleeeeedrsA 111
                 ++  +e+l++ +e+l+++e  +sA
  EPX72564.1 145 SKAFQEKLKRSMEKLKSSE--NSA 166
                 3333666777777775433..555 PP

>> ApoO  Apolipoprotein O
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.1       0.4   9.1e+02      67      67 ..      58      58 ..       6     120 .. 0.63
   2 ?   12.3   0.9   5.4e-05      0.12      16      55 ..     130     169 ..     117     172 .. 0.93

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.4
        ApoO 67 l 67
                l
  EPX72564.1 58 L 58
                1 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 5.4e-05
        ApoO  16 LeegvrslRkslepytsavqdelnkvkskvetaeqsvtdt 55 
                 Lee v++   s++++++a+q++l++ ++k++++e+s ++t
  EPX72564.1 130 LEERVNRFQVSVKNHSKAFQEKLKRSMEKLKSSENSAQKT 169
                 9***********************************9988 PP

>> DUF1517  Protein of unknown function (DUF1517)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   1.5    0.0062        14      11      68 ..      11      70 ..       4     124 .. 0.76
   2 ?    8.7   0.2   0.00079       1.8       4      42 ..     134     172 ..     132     174 .] 0.89

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0062
     DUF1517 11 L..lakarslqrdLnriaeeadtsskeglaellqevvlaLlrheeywvyaasesdqfked 68
                   l k +s  +++ ++  + +t+ ++  a+ ++++vl+  +h++ ++  +    q ke+
  EPX72564.1 11 FphLRKSNSSNKKMSNLINQLQTELSNRHATFVSQAVLSFNKHHDRVLQSYIIEGQAKES 70
                4544556789999********************************999988766655532 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00079
     DUF1517   4 vlklqVaLlakarslqrdLnriaeeadtsskeglaellq 42 
                 v ++qV ++++ + +q++L+r +e+ + s ++  ++ll+
  EPX72564.1 134 VNRFQVSVKNHSKAFQEKLKRSMEKLKSSENSAQKTLLE 172
                 7899****99999*************9999998888886 PP

>> WXG100  Proteins of 100 residues with WXG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.1     0.046     1e+02      19      55 ..      20      56 ..      14      62 .. 0.64
   2 ?    5.1   0.4     0.012        27      42      75 ..      64      97 ..      63     108 .. 0.86
   3 ?    2.7   0.1     0.065   1.5e+02      50      74 ..     146     170 ..     132     173 .. 0.65

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.046
                HHHHHHHHHHHHHHHHHHCGCGCTHHHCHHHHHHHHH CS
      WXG100 19 qaeeledelqrlkaevdalqsgWsGaaadafqaefee 55
                +++++++++++l+ e+++ ++++  +a  +f++  ++
  EPX72564.1 20 SNKKMSNLINQLQTELSNRHATFVSQAVLSFNKHHDR 56
                4556666777777777777777777666666666555 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.012
                THHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      WXG100 42 sGaaadafqaefeewkqaaqklvdaLeeisealk 75
                +G+a+++  + ++  + ++q++++++++ s++l 
  EPX72564.1 64 EGQAKESILQHYQDNQLKLQNIQKLYQDASKTLF 97
                69999************************99985 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.065
                 HHHHHHHHHHHHHHHHHHHHHHHHH CS
      WXG100  50 qaefeewkqaaqklvdaLeeiseal 74 
                 +a++e++k++++kl+   ++ +++l
  EPX72564.1 146 KAFQEKLKRSMEKLKSSENSAQKTL 170
                 4455566666666666666666655 PP

>> XhlA  Haemolysin XhlA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1       1.2   2.6e+03      21      38 ..      15      32 ..       3      37 .. 0.49
   2 ?   -2.3   0.1       2.3   5.2e+03      19      25 ..      84      90 ..      67      96 .. 0.55
   3 ?   11.6   1.2   0.00011      0.24       2      41 ..     130     170 ..     129     172 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 1.2
        XhlA 21 dkleekaaeaeekiknle 38
                 k +  + ++ + i +l+
  EPX72564.1 15 RKSNSSNKKMSNLINQLQ 32
                344444444444444444 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 2.3
        XhlA 19 rvdklee 25
                 ++kl +
  EPX72564.1 84 NIQKLYQ 90
                3444555 PP

  == domain 3  score: 11.6 bits;  conditional E-value: 0.00011
        XhlA   2 ikerlerietkldnlee..rvdkleekaaeaeekiknleedl 41 
                 ++er++r +  ++n+++  + +kl++ +++ +++  +++++l
  EPX72564.1 130 LEERVNRFQVSVKNHSKafQ-EKLKRSMEKLKSSENSAQKTL 170
                 79***************975.799999999999888888877 PP

>> SirA  Sporulation inhibitor of replication protein SirA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.2      0.42   9.5e+02      32      61 ..      16      44 ..       4      71 .. 0.52
   2 ?   10.3   8.5   0.00029      0.65       9     115 ..      68     174 .]      56     174 .] 0.88

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.42
                CS---HHHHHHHHHHHHEE---HHHHHHHH CS
        SirA 32 kakeedkeilykqieqitkplpklklnkkl 61
                k+++++k  ++++i+q+ ++l+  +     
  EPX72564.1 16 KSNSSNK-KMSNLINQLQTELSNRHATFVS 44
                4444443.3345555555555555544444 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00029
                 -HHHHHHCTT-CHHHHHHHHHHHCS---HHHHHHHHHHHHEE---HHHHH.HHHHHHCT.TSEEEEETTEEEEE-GGGSEEEEEEEETTEEEEEEEEST CS
        SirA   9 keefaklYkgreskLfklfeeiykakeedkeilykqieqitkplpklkln.kklkqklsekigykkeknihvinnlkkeevaeltiknsyikletegny 106
                 ke++ ++Y++++ kL ++ + ++ a+++   +l + +eq+ ++++ l+++ +kl q+ ++  +++++ n ++++ +++++  + ++k s+ kl++++n 
  EPX72564.1  68 KESILQHYQDNQLKLQNIQKLYQDASKTL-FLLLSEYEQVSTEIHGLDIEeEKLSQENCTLLDLEERVNRFQVSVKNHSKAFQEKLKRSMEKLKSSENS 165
                 7999***********99866666666665.788889*************7368***********************99999999**************9 PP

                 HHHHHHHHH CS
        SirA 107 eatiffevL 115
                 + ++++e L
  EPX72564.1 166 AQKTLLENL 174
                 558888866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2007  (0.111942); expected 358.6 (0.02)
Passed bias filter:                      407  (0.0227007); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.46u 0.29s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 1210.95
//
Query:       EPX72565.1  [L=224]
Description: SNARE Tgl1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.1e-17   62.5   0.9    6.5e-16   58.7   0.1    2.6  3  Syntaxin-6_N  Syntaxin 6, N-terminal
    9.4e-12   44.8   0.4    1.8e-11   43.8   0.4    1.5  1  SNARE         SNARE domain
     0.0039   15.2   0.7     0.0046   15.0   0.7    1.1  1  Prominin      Prominin
  ------ inclusion threshold ------
      0.045   12.9   2.4       0.27   10.3   0.1    2.4  3  APG17         Autophagy protein Apg17
       0.17   11.6   1.7       0.25   11.0   0.3    1.8  2  DUF745        Protein of unknown function (DUF745)


Domain annotation for each model (and alignments):
>> Syntaxin-6_N  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.7   0.1   1.8e-19   6.5e-16       1      98 [.       3      93 ..       3      94 .. 0.96
   2 ?   -0.7   0.0      0.59   2.1e+03      70      92 ..     113     135 ..     102     142 .. 0.64
   3 ?    1.1   0.0      0.16   5.8e+02      12      51 ..     147     189 ..     136     197 .. 0.52

  Alignments for each domain:
  == domain 1  score: 58.7 bits;  conditional E-value: 1.8e-19
  Syntaxin-6_N  1 DPFfevkeeVqkslnkaeslyrrwerlledtssstseeldetrteLrkalrsiewdledLeetvriveknpskfkidekelsrrrafveevreevkem 98
                  DPF+evk++   +++++++l++++ +       +++  +   +teL  a+++++++ledL+ +++i+ +n +++++de+el+ rr+f++++  e++++
    EPX72565.1  3 DPFYEVKADASAQMENVRKLFESFMK-------NRNAGIPAPNTELSFAIEELNETLEDLKGAIEIAMNNSERYGLDEQELAARRKFIADFDVELNNI 93
                  9***********************77.......46999****************************************************99998876 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.59
  Syntaxin-6_N  70 npskfkidekelsrrrafveevr 92 
                   + +k  ++e++   rr++ e++ 
    EPX72565.1 113 DMTKTALTEDDRYARRQMQEQLY 135
                   33667777777777777766655 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.16
  Syntaxin-6_N  12 kslnkaeslyrrw.erlledtss..stseeldetrteLrkalr 51 
                   +s+ +++++ + + ++l e+++   +  + +++t+++Lr+ +r
    EPX72565.1 147 DSIGNIRGMAQAMgQELGEQSNLidTLDHTIENTNHKLRRGMR 189
                   5555566666666334433333332234444444444444444 PP

>> SNARE  SNARE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.8   0.4   5.1e-15   1.8e-11       2      53 .]     169     220 ..     168     220 .. 0.97

  Alignments for each domain:
  == domain 1  score: 43.8 bits;  conditional E-value: 5.1e-15
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTXXXXXXXXXXXXXXXXXXXX CS
       SNARE   2 mvDrIdtnVenaqsnveraqkeLkkavkyqksnRklkciillilviillvvl 53 
                 ++D++d+ +en++ +++r++++Lk +  ++ ++R+ +ci++li+++++l+vl
  EPX72565.1 169 LIDTLDHTIENTNHKLRRGMRRLKDFTISSADSRSGCCITVLIFILLVLLVL 220
                 8************************************************996 PP

>> Prominin  Prominin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.7   1.3e-06    0.0046     259     438 ..      35     221 ..       6     224 .] 0.62

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 1.3e-06
    Prominin 259 nklekeLrksgsqLrdglrgvkrdlnqalsn.lCq......s.eeCskilssleiekldtskcldqlpnvdevle.aleevletnlssivkeglarlne 348
                  +  +eL +  ++L++ l++ k  ++ a++n + +      + +   k+  + ++e  + + ++++ p+v    e + +++++t l++   ++    ++
  EPX72565.1  35 PAPNTELSFAIEELNETLEDLKGAIEIAMNNsE-RygldeqElAARRKFIADFDVELNNINLQMRSAPSVAVNQEpNNNDMTKTALTE---DDRYARRQ 129
                 55678999**********************943.335432211222333333333333333333333333332221122222222222...22223356 PP

    Prominin 349 ipekvknqtaevvpdlkkalakgreqikklakkip..realdavisdlenterssktfddvvekyekyrwliglivcsllllivvililgLl 438
                 ++e++ +q + ++  +  ++ ++r + + + +++   ++ +d++ +++ent++++++  + ++ +          +c+++l+ +++++l L+
  EPX72565.1 130 MQEQLYDQQDVMLDGVYDSIGNIRGMAQAMGQELGeqSNLIDTLDHTIENTNHKLRRGMRRLKDFTISSADSRSGCCITVLIFILLVLLVLV 221
                 777777787888888888888888888888888876688999999************99999999876666555555555554444444443 PP

>> APG17  Autophagy protein Apg17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.2     0.036   1.3e+02      78      97 ..      39      58 ..      10     108 .. 0.59
   2 ?    1.4   0.4     0.039   1.4e+02     122     175 ..      46     117 ..      42     130 .. 0.49
   3 ?   10.3   0.1   7.6e-05      0.27      35     101 ..     132     198 ..     116     204 .. 0.89

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.036
                HHHHHHHHHHHHHHHHHHTS CS
       APG17 78 keldaanerLektlekLrkt 97
                +el+ a e+L++tle L+  
  EPX72565.1 39 TELSFAIEELNETLEDLKGA 58
                44444444444444444432 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.039
                 THHHHHHHHH............HHHHHHHHHH.HHTTHH..HHHHHHHHHHH......-------.STCCHHHH CS
       APG17 122 eelkealkes............idelqaaqkk.ldssllefdtdlrelkkel......sksksks.essslipe 175
                 eel+e l+++            +  l++ +     + +  fd +l++++ ++      +   +++ ++++++++
  EPX72565.1  46 EELNETLEDLkgaieiamnnseRYGLDEQELAaRRKFIADFDVELNNINLQMrsapsvA--VNQEpNNNDMTKT 117
                 55555555544444444444442222222222023334477777777777776666421..2222244444444 PP

  == domain 3  score: 10.3 bits;  conditional E-value: 7.6e-05
                 HHHHHHHHHHHHHHHHHHHHHHHIIIIIIIIIIIIIIIIIHHHHHHHHHHHHHHHHHHHHHTSS-TT CS
       APG17  35 vkllakteflrdglkqQlkllekirkslerklekgkeefkdlikeldaanerLektlekLrktkvep 101
                 ++l ++   + dg+ + +  ++ +++ ++++l + ++ +++l++++++ n +L++ + +L++ ++ +
  EPX72565.1 132 EQLYDQQDVMLDGVYDSIGNIRGMAQAMGQELGEQSNLIDTLDHTIENTNHKLRRGMRRLKDFTISS 198
                 6788889999***************************************************999876 PP

>> DUF745  Protein of unknown function (DUF745)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1      0.14   4.9e+02     102     156 ..      41      98 ..       7     102 .. 0.50
   2 ?   11.0   0.3     7e-05      0.25      70     157 ..      96     186 ..      87     199 .. 0.75

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.14
      DUF745 102 aqqqlealkallkaakenlenaeqvaaga...qqelaektqlleaAkkRveeLkkqlk 156
                     +e l+++l+  k ++e a + ++     +qela++++ +++    +++++ q++
  EPX72565.1  41 LSFAIEELNETLEDLKGAIEIAMNNSERYgldEQELAARRKFIADFDVELNNINLQMR 98 
                 4444455555555555544444433333212256666666666666666666666655 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 7e-05
      DUF745  70 elreaeav.vqeekkslqsseanakaaak.aakqaqqql.ealkallkaakenlenaeqvaagaqqelaektqlleaAkkRveeLkkqlke 157
                 ++r a +v v++e ++   ++++++   + a++q+q+ql ++   +l+ + +++ n++ +a+ + qel e+++l+++  + +e+ +++l+ 
  EPX72565.1  96 QMRSAPSVaVNQEPNNNDMTKTALTEDDRyARRQMQEQLyDQQDVMLDGVYDSIGNIRGMAQAMGQELGEQSNLIDTLDHTIENTNHKLRR 186
                 5555544327888888888888877665514455555551666778999***************************999999998888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1108  (0.0617993); expected 358.6 (0.02)
Passed bias filter:                      650  (0.0362541); expected 358.6 (0.02)
Passed Vit filter:                        72  (0.00401584); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.48u 0.30s 00:00:00.78 Elapsed: 00:00:00.44
# Mc/sec: 1541.34
//
Query:       EPX72566.1  [L=239]
Description: nucleosome assembly protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-18   66.1  21.2    3.1e-16   59.3   7.6    3.3  3  NAP       Nucleosome assembly protein (NAP)


Domain annotation for each model (and alignments):
>> NAP  Nucleosome assembly protein (NAP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.1     1e-06     0.019      12      47 ..       9      44 ..       4      46 .. 0.92
   2 !   59.3   7.6   1.8e-20   3.1e-16      86     269 ..      44     199 ..      43     200 .. 0.85
   3 ?   -4.9   1.9      0.69   1.2e+04      64      68 ..     217     221 ..     202     238 .. 0.37

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 1e-06
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT CS
         NAP 12 elskleaefqeevlelekkyaalykplyekrseIin 47
                +l++le++f ++  e+ +k ++l+kpl+ekr++I++
  EPX72566.1  9 NLANLEQDFGKAEIEILRKQNELFKPLFEKRRDILK 44
                6789******************************87 PP

  == domain 2  score: 59.3 bits;  conditional E-value: 1.8e-20
                 TTSTTHHHHHHHTS.HHHHTT--HHHHHHHTTEEEEEEEE-------EEEEEEEE-S-SSB--S..EEEEEEEE----........----EEEEEE--- CS
         NAP  86 kgipeFWltvlknv.ellaeliqerDepiLkhLkdirveyllskekegFtleFeFdeNpyFtne..vLtktyilksevdkedpfiydgpeiekaegckI 181
                 k+i +FW+ v++ + + ++++i+++D+  L+ L++i ve+  ++++++ +++ +F++N+y +++   L+k+ ++k+++ k+++   + ++   ++  +I
  EPX72566.1  44 KNIRNFWVVVFEAAgDEISQYITPEDSILLEKLENIYVERYNKEDPRDVRITLTFQPNDYLEDDnlNLVKEVHIKESTTKDEEGLEKTNTSLVSKPADI 142
                 79*********9874899**********************98888999*************97733789******9998888888888999999***** PP

                 -B-TT--TTS----------...-------------GGGGS--B---------------HHHHHHHHHHHHHHHHHTHHHHHHHHHHT CS
         NAP 182 dWkegkdvtvktvkkkqknkktketrtvtkkvpkeSFFnfFsppkvpeeeeeeeeeeeeleelleadyeigealkdkiiPkAveyFtg 269
                 +Wk gk +  k        k            +   FF++F        +   eeee++ +       ++  +l++++ P+Av+yFt 
  EPX72566.1 143 KWKAGKSLFRKN-------K-----------DSPPNFFDYFRWT-----G---EEEEDDFD-----GASLTIFLAEDLFPNAVKYFTE 199
                 ********9432.......2...........33467******43.....2...23344554.....78899***************96 PP

  == domain 3  score: -4.9 bits;  conditional E-value: 0.69
                 ..... CS
         NAP  64 keeee 68 
                 +e+++
  EPX72566.1 217 EEDDD 221
                 11111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       894  (0.0498633); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 1648.34
//
Query:       EPX72567.1  [L=1573]
Description: PEK/GCN2 protein kinase Gcn2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.3e-77  259.0   5.4    2.2e-40  138.7   0.0    4.4  5  Pkinase          Protein kinase domain
    1.2e-58  198.8  10.6    1.2e-58  198.8  10.6    2.4  3  HGTP_anticodon2  Anticodon binding domain of tRNAs
      4e-46  157.4   0.1    1.2e-22   80.5   0.0    4.4  4  Pkinase_Tyr      Protein tyrosine kinase
    5.1e-19   68.7   2.1    3.3e-18   66.1   0.1    3.4  3  RWD              RWD domain
    5.2e-11   42.4   0.0    1.6e-10   40.8   0.0    1.9  1  tRNA-synt_His    Histidyl-tRNA synthetase
    7.2e-06   25.8   0.4       0.67    9.5   0.1    3.6  3  FTA2             Kinetochore Sim4 complex subunit FTA2
    2.5e-05   23.7   0.0      0.026   13.8   0.0    2.5  2  Kinase-like      Kinase-like
    2.9e-05   23.5   2.6      0.093   12.1   0.0    2.9  3  Kdo              Lipopolysaccharide kinase (Kdo/WaaP) family
    0.00035   20.6   0.2      0.027   14.4   0.0    2.5  2  APH              Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0         3   6.1e+03      18      45 ..      10      37 ..       9      39 .. 0.84
   2 !   73.9   0.0   6.7e-24   1.3e-20      38     263 ..     283     509 ..     277     510 .. 0.83
   3 !   45.9   0.1   2.3e-15   4.5e-12       1      71 [.     555     624 ..     555     637 .. 0.93
   4 !  138.7   0.0   1.1e-43   2.2e-40      70     262 ..     717     913 ..     675     915 .. 0.86
   5 ?   -2.2   0.1         1   2.1e+03     124     143 ..    1395    1414 ..    1393    1429 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 3
                EEETTTTEEEEEEEEECHCHCHHHHHHH CS
     Pkinase 18 aveketgkivAvKkikkekakkkkekkv 45
                ++e+++++i A+K i  ++ ++ k k++
  EPX72567.1 10 CRETQQNEIAALKAIFMDDFEELKSKNA 37
                889999********99999888887766 PP

  == domain 2  score: 73.9 bits;  conditional E-value: 6.7e-24
                 CHHHHHHHHHHHHHHHHHSCTTB--EEEEEEE......SSEEEEEEE--TTEBHHHHHHHHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEE CS
     Pkinase  38 kkkkekkvlrEikilkklkhpnivrlyevfee......kdelylvleyveggeladllerkgslseeeakkiakqilegleylHskgiiHrDlKpeNiL 130
                  kk+ +++ +E++ lk ++h+ +  +ye+  +        +ly+++ey ++ +la ll++ ++l+ e+++ + ++ilegl+ lH+ gi Hr l  +N++
  EPX72567.1 283 GKKSIQDLESELEDLKVIRHDLLASIYEYQLQrevenhGWRLYILQEYSNKLTLAGLLQTIVTLDVETVRTFSNNILEGLAELHRLGISHRNLHLDNVI 381
                 4444478999****************9998877887767789*******************************************************99 PP

                 EETTTE...EEE-SGTTSEESSSSCS.........BCTTTSCGGGS-HHHHTT..SCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHH CS
     Pkinase 131 idekge...lKitDFGlakelesssk.........ltsfvgtseYlAPEvlke..neyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlek 215
                 + ++g+    K++DF + + l+  +              +   +  +PEv ++   + s+k+D+W  G++++++l+g ++++          ++     
  EPX72567.1 382 LFQSGHktfAKLMDFCFTRTLRDMNAsspfnagsqSIPGILPDDLYPPEVNESsfMSASRKTDIWCFGLMVLQMLCGMHVLQ----------KFSS--- 467
                 998888899***********999887788888744222233456779999955224559***********************..........2233... PP

                 HHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGG CS
     Pkinase 216 ilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpy 263
                  lk+l      ++    ++   ++l++++l +dpkkR+ta++ll++++
  EPX72567.1 468 -LKLL-----FSHVIPLLPGPYQELIRRCLMRDPKKRPTATDLLASQV 509
                 .1122.....23445667999**********************99876 PP

  == domain 3  score: 45.9 bits;  conditional E-value: 2.3e-15
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESS CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekd 71 
                 +e++e lG+G+fG+V+k++++ +g+ +A+Kk+  ++++k++ +++lrE+  l +l+h+++vr+y ++ e+d
  EPX72567.1 555 FEEIEFLGKGGFGEVVKVKNRIDGRFYAIKKLLLHNNDKEN-SRILREVMTLSRLHHDHVVRYYTAWVETD 624
                 678999*****************************999877.69*********************998865 PP

  == domain 4  score: 138.7 bits;  conditional E-value: 1.1e-43
                 SSEEEEEEE--TTEBHHHHHHHHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS..............B CS
     Pkinase  70 kdelylvleyveggeladllerkgslseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk..............l 154
                 + +ly+ +ey+e+ +l+d++++  +l+ +e+ ++++qile+l+y+Hs+g++HrDlKp N+++de++++K++DFGla+  e s+               l
  EPX72567.1 717 NATLYVQMEYCEKLSLQDIIRE--KLQVDEIWRLFRQILEALAYIHSRGMMHRDLKPGNVFLDENRNVKLGDFGLATDNEPSQVindksknrnaddgeL 813
                 7789****************85..89999************************************************9999887899999********* PP

                 CTTTSCGGGS-HHHH...TTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGC CS
     Pkinase 155 tsfvgtseYlAPEvl...keneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpk 250
                 ts vgt  Y+APE+l   ++ +y++kvD++slG+il+e+   ++ fs + ++    + +d + + + il       + + ++ ++  +++++ll+ dp 
  EPX72567.1 814 TSGVGTALYVAPELLkktSGLHYDAKVDMYSLGIILFEM---CMSFSTSMER---IRLIDAIRSPFIIL-----PDNFPFSLTSHEYKVIHSLLQHDPA 901
                 ***************8777789*****************...5566622333...34555555566666.....4577788899999************ PP

                 CSTTHHHHHTSG CS
     Pkinase 251 kRltaeellqhp 262
                 kR++ +ell+++
  EPX72567.1 902 KRPSSQELLESE 913
                 ********9875 PP

  == domain 5  score: -2.2 bits;  conditional E-value: 1
                  -SGGGEEEETTTEEEE-SGT CS
     Pkinase  124 lKpeNiLidekgelKitDFG 143 
                  +K  Ni+ +e++e+Ki   G
  EPX72567.1 1395 VKARNIMKNEDDEIKIEEVG 1414
                  799************97766 PP

>> HGTP_anticodon2  Anticodon binding domain of tRNAs
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.8       1.2   2.3e+03     149     185 ..     139     177 ..     118     202 .. 0.70
   2 ?   -4.3   1.7       5.2     1e+04     110     138 ..     667     694 ..     622     711 .. 0.49
   3 !  198.8  10.6   5.8e-62   1.2e-58       1     263 []    1322    1572 ..    1322    1572 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 1.2
  HGTP_anticodon2 149 qkevrvlvaatrsk.ksnkrekveq.ddAqeaaaelvks 185
                      ++e  v+ ++ r++  ++k+ k+e+ ++A  + ++++++
       EPX72567.1 139 EEERAVQLQQDRERaEMDKQLKLEReKEALYEEEKILQN 177
                      444455556666665568888888878887777777765 PP

  == domain 2  score: -4.3 bits;  conditional E-value: 5.2
  HGTP_anticodon2 110 reesaksskssaessqkedeassesseel 138
                       e++a+s+kss++ss+++ ++ss +se+l
       EPX72567.1 667 FEGEASSPKSSETSSETSYSTSS-TSEDL 694
                      33333333333333333333222.33333 PP

  == domain 3  score: 198.8 bits;  conditional E-value: 5.8e-62
  HGTP_anticodon2    1 WkpkRcDVlVasfdksiLrtsgvellqeLWahnIsAdlaldasksleelvskarddgvswiviikqqnkskskekplkvkslekkedvdldl 92  
                       W p+R+DVlV+s+ k+ +  ++++llqeLW+ nI+Ad++l+ ++slee+v++++++gv+w+++++q+n  +++e+++k+++++k+ed ++++
       EPX72567.1 1322 WLPRRVDVLVTSIGKDSI-MEKCALLQELWSLNIRADIVLRGATSLEEIVTRYKSEGVNWVLVVRQKN--TQMEHSVKARNIMKNEDDEIKI 1410
                       99****************.9**********************************************66..********************** PP

  HGTP_anticodon2   93 delvswlkqeirerekereesaksskssaessqkedeassesseeleealaskeerqkevrvlvaatrsk.ksnkrekveq.ddAqeaaael 182 
                       +e+  wl  ei+er+  r+e+ ++++++ +s+ ++ ++ +              ++ +e +++v+    k  s++++k+++ ++A++++ +l
       EPX72567.1 1411 EEVGVWLLGEINERK--RNENLSQTRQVIDSDIQDYAKYN--------------DSLSETNLDVQLVPLKgASDRKYKWKHkQNAMNKVYDL 1486
                       **************9..88888888898999988877654..............4556666777777777778999**************** PP

  HGTP_anticodon2  183 vksll.....ngpiaaidtrdevlemisetsLsdkdeWrkviqsvntaersyateihnaLskeaakgkkwailynfrtgkcilydL 263 
                       v+s++     ++  +a+d++   ++ +++tsL+++++W+k+++s+++++r+y+++++ +L++ a+kg++++++++frt++++ly L
       EPX72567.1 1487 VQSAIhdstkDALALAVDCDAPAMQRLKSTSLKNEESWKKLVDSCPASQREYMQRLQTKLTNLAEKGRNRVWICSFRTNEIYLYGL 1572
                       ***99999999************************************************************************987 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.0   0.0     5e-16   9.9e-13      39     256 ..     281     505 ..     277     508 .. 0.82
   2 !   22.6   0.0   2.6e-08   5.2e-05       4      72 ..     558     622 ..     555     629 .. 0.89
   3 !   80.5   0.0     6e-26   1.2e-22      74     257 ..     718     911 ..     693     912 .. 0.84
   4 ?   -0.5   0.0      0.31   6.1e+02     128     150 ..    1394    1416 ..    1386    1435 .. 0.78

  Alignments for each domain:
  == domain 1  score: 48.0 bits;  conditional E-value: 5e-16
                  TSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSS......EEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-S CS
  Pkinase_Tyr  39 eateeekeelleeakimkklkhpnivkllgvctkeep......llivteyvkgGdLlkfLrkkekekltlkdllsfalqvAkGmeyLeskklvHrdla 130
                  ea +++ ++l +e++ +k ++h+ + +++   +++e       l+i+ ey ++ +L   L++    +l+++++  f+ ++ +G++ L++  + Hr+l 
   EPX72567.1 281 EAGKKSIQDLESELEDLKVIRHDLLASIYEYQLQREVenhgwrLYILQEYSNKLTLAGLLQTI--VTLDVETVRTFSNNILEGLAELHRLGISHRNLH 376
                  56677899*********************99994443456677******************98..99******************************* PP

                  GGGEEEEE...TTEEEE-STTTHEETTTSSEE......EETTSSTSGGGGS-HHHHHHSE..EEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHH CS
  Pkinase_Tyr 131 arNvLlse...nkvvkisDfGLardiekddey......vkkeeaklpvkWmapEslkekk..ftsksDvWsfGvllwEiftlgespypglkneevlek 217
                    Nv+l +   ++++k+ Df  +r++ +++        +++  + lp   ++pE+ +++    + k+D+W+fG ++  +++ g + ++++++ ++l  
   EPX72567.1 377 LDNVILFQsghKTFAKLMDFCFTRTLRDMNASspfnagSQSIPGILPDDLYPPEVNESSFmsASRKTDIWCFGLMVLQMLC-GMHVLQKFSSLKLL-- 471
                  ****9987565789***********9655554454444445556688999****99887644789**************99.66666666554433.. PP

                  HHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHH CS
  Pkinase_Tyr 218 lkegkrlekpekcpeelyelmkkcweedpeeRptfselv 256
                           p   p   +el+++c+ +dp++Rpt ++l+
   EPX72567.1 472 ----FSHVIPL-LPGPYQELIRRCLMRDPKKRPTATDLL 505
                  ....3333444.6667899**************998875 PP

  == domain 2  score: 22.6 bits;  conditional E-value: 2.6e-08
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEES CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctk 72 
                   + lG+G fG+Vv+ + +     +    a+K+l  +++++e++++l+e+ ++++l+h+++v+++ + ++
   EPX72567.1 558 IEFLGKGGFGEVVKVKNR----IDGRFYAIKKLLLHNNDKENSRILREVMTLSRLHHDHVVRYYTAWVE 622
                  5779**********9999....6677889****99999999**********************998875 PP

  == domain 3  score: 80.5 bits;  conditional E-value: 6e-26
                  SSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEET......TTSSEEEETTSS CS
  Pkinase_Tyr  74 epllivteyvkgGdLlkfLrkkekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardi......ekddeyvkkeea 165
                   +l++ +ey+++ +L++ +r+k    l+++++ ++  q+ ++++y++s+ ++Hrdl   Nv+l+en+ vk++DfGLa d       +++++ ++++++
   EPX72567.1 718 ATLYVQMEYCEKLSLQDIIREK----LQVDEIWRLFRQILEALAYIHSRGMMHRDLKPGNVFLDENRNVKLGDFGLATDNepsqviNDKSKNRNADDG 811
                  568999**************99....***************************************************986211111233333333333 PP

                  T.....SGGGGS-HHHHHHSE...EEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHH CS
  Pkinase_Tyr 166 k.....lpvkWmapEslkekk...ftsksDvWsfGvllwEiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfsel 255
                  +         ++apE lk+++   +  k D++s G++l+E++   ++++++++  ++++        + p + +++ y+++++ +++dp++Rp+ +el
   EPX72567.1 812 EltsgvGTALYVAPELLKKTSglhYDAKVDMYSLGIILFEMCMSFSTSMERIRLIDAIRSPFIILPDNFPFSLTSHEYKVIHSLLQHDPAKRPSSQEL 909
                  3111114678*********98899*******************8888888888887777777777788999999********************9998 PP

                  HH CS
  Pkinase_Tyr 256 ve 257
                  +e
   EPX72567.1 910 LE 911
                  75 PP

  == domain 4  score: -0.5 bits;  conditional E-value: 0.31
                   T-SGGGEEEEETTEEEE-STTTH CS
  Pkinase_Tyr  128 dlaarNvLlsenkvvkisDfGLa 150 
                    + arN++ +e++ +ki   G+ 
   EPX72567.1 1394 SVKARNIMKNEDDEIKIEEVGVW 1416
                   578**************999964 PP

>> RWD  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.1   0.1   1.7e-21   3.3e-18       1     116 []      12     124 ..      12     124 .. 0.94
   2 ?   -3.6   0.0       6.8   1.4e+04       9      27 ..     304     323 ..     302     332 .. 0.71
   3 ?   -0.6   0.0      0.76   1.5e+03      78      99 ..    1532    1553 ..    1469    1562 .. 0.83

  Alignments for each domain:
  == domain 1  score: 66.1 bits;  conditional E-value: 1.7e-21
                 HHHHHHHHHHHHHSTTTCCCCH.T--EE--S-EEEEEEECECCCC....TT-CEEEEEEEEE-SSTTSS--EEEEEECCSS-HHHHHHHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RWD   1 eeqeqEleaLesIypdefevie.nenysikleikikldededeedsefeekkkpslkleiklpeeYPeeaPiislsstenlpkeqvksleekleelaee 98 
                 e q++E+ aL++I++d+fe+++ ++ ++++    + +++ + +     + k+  ++ l+i+l  +YP++ Pi++l++ en+ k+q+  l +kl+++a+e
  EPX72567.1  12 ETQQNEIAALKAIFMDDFEELKsKNAWNVSNGRVFAIHLCSRSA----SAKSIAKVDLHIELGRSYPYVKPIVKLQNGENVLKSQIRFLLKKLDQKAKE 106
                 78****************77777999999999999999998885....5799*********************************************** PP

                 TTTS--CHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxx RF
         RWD  99 nlgepvifalidwlkenl 116
                  lge++if++++ ++e l
  EPX72567.1 107 LLGEEMIFEFASIVQEYL 124
                 ***************975 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 6.8
                 HHHHHSTTTC.CCCHT--EE CS
                 xxxxxxxxxx.xxxxxxxxx RF
         RWD   9 aLesIypdef.evienenys 27 
                  L+sIy+ ++  ++en  ++
  EPX72567.1 304 LLASIYEYQLqREVENHGWR 323
                 699***99995445555555 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.76
                  CSS-HHHHHHHHHHHHHHHHHT CS
                  xxxxxxxxxxxxxxxxxxxxxx RF
         RWD   78 enlpkeqvksleekleelaeen 99  
                     ++e +++l++kl +lae+ 
  EPX72567.1 1532 PASQREYMQRLQTKLTNLAEKG 1553
                  35679999**********9964 PP

>> tRNA-synt_His  Histidyl-tRNA synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.8   0.0   7.9e-14   1.6e-10     127     310 .]    1092    1291 ..    1015    1291 .. 0.82

  Alignments for each domain:
  == domain 1  score: 40.8 bits;  conditional E-value: 7.9e-14
                     HHHHHHHHHHHHHHHCTSSSEEEEEEETCHHHHHHHHTT--HHHHHHHHHHHHCT-....HHHHHHHHHCCT.THHHCCHCC....HCCHCCCH CS
  tRNA-synt_His  127 dlEvlslllealeaaagvkelrldlghvglvralleaaglsesleeallaalarkd....laelkelaaeag.lkealrellkal.elygdaev 214 
                     d+E++++l e+l +  ++ +  + ++h+++++a+l+ +++s +++++  ++l +k+     +++++ ++++  +++++++ l+++  + + +e 
     EPX72567.1 1092 DAECIKVLDEVLLEIPSLVNSCIWINHADIFSAILDFLQISREKRNRTSQILGQKNqgfsFSQIRNQLRNESlVPSTTLDDLNQFdFCVNFEEG 1185
                     99*********97666689999*********************************933334577766665443778999******9999999** PP

                     HHHCHCCHCTHH..HHHHHHHHHHHHHHHHHHHHHH-TTEEE-TT--TTTTT--.SEEEEEEE.TT-SS-SEEEEEECTTTGGGT-.......- CS
  tRNA-synt_His  215 leealealaaap..alqaaldeleelaallealakpevrvtlDlaelrgyeYyt.GlvFaaya.egvgqaiarGGrYdelgaafgr.......a 297 
                     +++ ++ + ++   ++++ l+ le+++  l+ l+  + +v + +  ++ +e+y+ G++F+a+  +++ + +  GGrYd+l++ f+        +
     EPX72567.1 1186 INRIRRIFGKSMtiKMRSSLNYLEKVWCFLKGLK-LSHPVFFVPLSVHSHEFYEgGIMFQAVHtPEKAELLCAGGRYDKLVRLFDPplmrttrR 1278
                     ***9887766542256778888899999999996.6778888888888888777369***998245556789***********96444445558 PP

                     -EEEEEEEEHHHH CS
  tRNA-synt_His  298 rpAtGfsldleal 310 
                     +  +G+sl le++
     EPX72567.1 1279 KHVVGMSLGLESI 1291
                     8999999999875 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.0    0.0023       4.5     145     204 ..     324     381 ..     292     386 .. 0.77
   2 !    9.5   0.1   0.00034      0.67      22      70 ..     553     598 ..     546     622 .. 0.69
   3 !    5.0   0.0    0.0082        16     153     212 ..     728     788 ..     690     791 .. 0.71

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0023
        FTA2 145 ralgeedgkkrpiraIVKelellkeqeelevsqlpkllrdlkklhklgIvvrDlkeenyi 204
                  ++ +e+++k  + ++ +   +++ + e+     +++l+ l +lh+lgI++r+l+ +n+i
  EPX72567.1 324 LYILQEYSNKLTLAGLLQT--IVTLDVETVRTFSNNILEGLAELHRLGISHRNLHLDNVI 381
                 4556667777777777777..777777777788899*******************99976 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00034
        FTA2  22 kdiefleyLgkglhsiVlkvk..irgkeYALKlFrfleaeeleeaeedlki 70 
                  d+e +e+Lgkg  + V+kvk  i+g+ YA+K    ++      ++e+++i
  EPX72567.1 553 TDFEEIEFLGKGGFGEVVKVKnrIDGRFYAIKKLLLHNN-----DKENSRI 598
                 58999************99955599******95444433.....3333333 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.0082
        FTA2 153 kkrpiraIVKelellkeqeelevsqlpkllrdlkklhklgIvvrDlkeeny.....idgkLvDls 212
                 +k  +  I++e    k q   + + ++++l+ l  +h+ g ++rDlk+ n+     ++ kL D++
  EPX72567.1 728 EKLSLQDIIRE----KLQVDEIWRLFRQILEALAYIHSRGMMHRDLKPGNVfldenRNVKLGDFG 788
                 55555566666....55666677889*********************998722222456677776 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0    0.0013       2.6     157     286 ..     362     496 ..     279     498 .. 0.71
   2 !   13.8   0.0   1.3e-05     0.026     152     204 ..     751     803 ..     718     858 .. 0.66

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0013
  Kinase-like 157 aanLqakglvhgkftvdnllldekgg...lmlggf...taLvragtkvvlseve...........kgfaPpEllgsrggytrknktkmthkldaWqlG 237
                   a+L+ +g+ h +++ dn++l + g     +l +f     L+   ++ +    +             + PpE+  s         +  + k+d W  G
   EPX72567.1 362 LAELHRLGISHRNLHLDNVILFQSGHktfAKLMDFcftRTLRDMNASSPF---NagsqsipgilpDDLYPPEVNES-------SFMSASRKTDIWCFG 449
                  58899999999999999999999886333467776222234444444444...23446777777788899999888.......4557899******** PP

  Kinase-like 238 lviyriwclklPltlateeakeewkfklck.kipekvkaLlkkfLqlsqe 286
                  l ++ + c    l++  ++   +  f+++    p + + L+++ L ++ +
   EPX72567.1 450 LMVLQMLCGMHVLQKFSSL---KLLFSHVIpLLPGPYQELIRRCLMRDPK 496
                  ********76554444332...3456666644566666666666666555 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 1.3e-05
  Kinase-like 152 qlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvlseve 204
                  q++   a+++++g++h ++++ n++lde+  ++lg+f+       + v++   
   EPX72567.1 751 QILEALAYIHSRGMMHRDLKPGNVFLDENRNVKLGDFGLATDNEPSQVINDKS 803
                  6667789******************************8655555555555544 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.2   0.00016      0.32      90     166 ..     322     396 ..     290     408 .. 0.80
   2 ?   -2.9   0.0       1.8   3.7e+03      44      72 ..     583     612 ..     550     620 .. 0.75
   3 !   12.1   0.0   4.7e-05     0.093     118     162 ..     743     783 ..     724     808 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00016
         Kdo  90 yrAlllterlegaqdLedllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDl 166
                 +r  +l e   +   L+ ll++  +l++e  r+  +++    a+lhr+g+ H+ l   n+ l q + ++  + l+D+
  EPX72567.1 322 WRLYILQEY-SNKLTLAGLLQTIVTLDVETVRTFSNNILEGLAELHRLGISHRNLHLDNVILFQSG-HKTFAKLMDF 396
                 666666554.555678889998888999999999999**********************9998887.7888889998 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.8
         Kdo  44 lskdlyrfk.lgrtravrEfrllkrLeeag 72 
                 + k l+  +  ++ r+ rE+  l rL++  
  EPX72567.1 583 IKKLLLHNNdKENSRILREVMTLSRLHHDH 612
                 445444445678999999999999999765 PP

  == domain 3  score: 12.1 bits;  conditional E-value: 4.7e-05
         Kdo 118 elkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiw 162
                     +l++++  + a +h++g++H+dl + n++l+++     ++ 
  EPX72567.1 743 DEIWRLFRQILEALAYIHSRGMMHRDLKPGNVFLDENR----NVK 783
                 445567889999999********************997....444 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.1      0.03        60     160     181 ..     362     383 ..     302     391 .. 0.75
   2 !   14.4   0.0   1.4e-05     0.027     145     197 ..     742     791 ..     718     797 .. 0.69

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.03
                 --SSS-EEEE-SS-SGGGEEEC CS
         APH 160 lpgelptvllHgDlhpgNllvd 181
                 l+   + ++ H+ lh++N+++ 
  EPX72567.1 362 LAELHRLGISHRNLHLDNVILF 383
                 3335689************987 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 1.4e-05
                 HHHHHHHHHHHHHHH--SSS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-E CS
         APH 145 leeleeqvlaalaallpgelptvllHgDlhpgNllvdpddgrvtGviDfedag 197
                 + e+++ +++ l+al+    +++ +H+Dl+pgN+ +d++ +    + Df++a+
  EPX72567.1 742 VDEIWRLFRQILEALAY-IHSRGMMHRDLKPGNVFLDENRNVK--LGDFGLAT 791
                 34555634444444444.479****************544444..67777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1573 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1152  (0.0642534); expected 358.6 (0.02)
Passed bias filter:                      488  (0.0272185); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 1.04u 0.27s 00:00:01.31 Elapsed: 00:00:00.48
# Mc/sec: 9869.72
//
Query:       EPX72568.1  [L=502]
Description: CDP-diacylglycerol-glycerol-3-phosphate3-phosphatidyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-13   50.8   0.0    2.1e-05   24.4   0.0    2.5  2  PLDc_2    PLD-like domain
    0.00064   19.8   3.7       0.12   12.6   0.1    3.5  2  PLDc      Phospholipase D Active site motif


Domain annotation for each model (and alignments):
>> PLDc_2  PLD-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.0   2.3e-09   2.1e-05       1     119 [.      44     183 ..      44     199 .. 0.77
   2 !   24.0   0.0   3.2e-09   2.9e-05       9     128 ..     331     468 ..     323     472 .. 0.63

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 2.3e-09
      PLDc_2   1 liqliksAkksidiatyyf.vsdreildallkaakrg..vkvrilldskkddagavdeaslkelkellle...agvevrvfet..........ll.... 79 
                 l++liks++k+i ++t y+ + ++e+l+ +++a   +   +v il d+ +++  ++++ s++ l +l  e   + +e+++++t                
  EPX72568.1  44 LKNLIKSSEKRIFLSTLYIgKEEDEFLNVIRQALLTKpkLQVFILADQLRSTREFPAHSSASLLTKL-KEefpERCEIKLYHTpnlrgltkriVPkrfn 141
                 6789***************888888999998855544247888899999999999999999998888.4424468999999844455554554005566 PP

      PLDc_2  80 ...gslHaKlylidgktvivGSsNltkrgldlnlElnvviedk 119
                    g  H K+y  d + +iv ++Nl++ +++ + +    ++d 
  EPX72568.1 142 egwGLQHMKIYGAD-DSLIVSGANLSRDYFTNRKDRYYLFHDT 183
                 8999*********8.589999*********9999988888877 PP

  == domain 2  score: 24.0 bits;  conditional E-value: 3.2e-09
      PLDc_2   9 kksidiatyyfvsdreildallkaakrgvkvrilldskkd............dagavdeaslkelkellleagvevrvfet....ll....gslHaKly 87 
                 k +  +  +yf++ +e+ ++llk +  g    i+ ++ ++                   +  ++++e+ l+   ++r+       ++    +++HaK++
  EPX72568.1 331 KVEWTLTAGYFNVYPELRKQLLKSKGTG--EAIVASQ-EAngfykskgpshmI-----PPAYQYIAEKFLHDATRMRK--DinvlQWqrpgHTYHAKGF 419
                 5566677788877777777776666665..3344444.444788777553332.....33444444443444444333..1222212445789****** PP

      PLDc_2  88 lid..gk....tvivGSsNltkrgldlnlElnvviedk..elakeleee 128
                 ++   g+     +++GSsN+t r+ +l+lE+ +vi  +  +l++ +++e
  EPX72568.1 420 WFTypGRpfpfLTTIGSSNYTSRSRQLDLEATMVIMTQnqQLQSTFQKE 468
                 **977557777999****************9998877633555555555 PP

>> PLDc  Phospholipase D Active site motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   0.1   1.3e-05      0.12       3      28 .]     145     169 ..     144     169 .. 0.92
   2 !    5.1   0.6     0.003        27       4      28 .]     413     443 ..     411     443 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.3e-05
                 BEE---EEEETTTEEEEE---SSHHH CS
        PLDc   3 gthHqKivivDdrvafvGgaNLcdgr 28 
                 g++H+Ki+  Dd   +v+gaNL + +
  EPX72568.1 145 GLQHMKIYGADDS-LIVSGANLSRDY 169
                 689**********.********8865 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.003
                 EE---EEEETTT......EEEEE---SSHHH CS
        PLDc   4 thHqKivivDdr......vafvGgaNLcdgr 28 
                 t+H+K++++         ++ +G++N++ ++
  EPX72568.1 413 TYHAKGFWFTYPgrpfpfLTTIGSSNYTSRS 443
                 7899999884436677777778888888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (502 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       594  (0.0331307); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.30s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 3345.60
//
Query:       EPX72569.1  [L=434]
Description: tor Complex Tor2 interacting protein 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      0.007   16.0   0.2      0.007   16.0   0.2    1.9  2  DUF4972   Domain of unknown function (DUF4972)


Domain annotation for each model (and alignments):
>> DUF4972  Domain of unknown function (DUF4972)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.2   3.9e-07     0.007      38      88 ..      85     135 ..      68     157 .. 0.87
   2 ?   -2.9   0.1      0.28     5e+03      89     108 ..     261     280 ..     258     290 .. 0.69

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 3.9e-07
     DUF4972  38 eevkteiyieqleelinkltdLrdesqyGekkgmYPeesraiLedaivklk 88 
                 e+ +++iyi  + +++  l+dL+  sq+G + +m  +     +ed i++ k
  EPX72569.1  85 ERNNVDIYIYEVAQYLSTLKDLKTVSQFGIRMDMLSTVQNVGMEDRIQSNK 135
                 567899****************************98888887888877655 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.28
     DUF4972  89 esiakikegnkaeaeeeadr 108
                 + ++++ ++n++ ++e+ + 
  EPX72569.1 261 KQVNTLAHQNEKMSPEKDND 280
                 56788888888888666544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (434 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       826  (0.0460706); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.20s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 3299.12
//
Query:       EPX72570.1  [L=108]
Description: 60S ribosomal protein L35a [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.3e-41  139.9   0.1    2.6e-41  139.7   0.1    1.0  1  Ribosomal_L35Ae  Ribosomal protein L35Ae
     0.0011   19.2   0.0       0.49   10.6   0.0    2.1  2  RimM             RimM N-terminal domain


Domain annotation for each model (and alignments):
>> Ribosomal_L35Ae  Ribosomal protein L35Ae
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.7   0.1   2.9e-45   2.6e-41       1      95 []       8     102 ..       8     102 .. 0.99

  Alignments for each domain:
  == domain 1  score: 139.7 bits;  conditional E-value: 2.9e-45
                      -EEEEEEEEEE--SSSSS-EEEEEEESS--SHHHHHCCTT-EE..EEE-......TTT-EEEEEEEEECTTTTEEEEEETT--SSS-TT-EEEE CS
  Ribosomal_L35Ae   1 LyvkavflgykrgkrnqrentaLlkiegvkskeeaefylGkrvayvykakkkkkgskvrviwGkvtrahGnsgvvrakFkknLppkaigarvrv 94 
                      Lyvka++l+y+r+k+++++nt+L+k+eg++ske+a+fylGkr+++vyk +k  +gsk+rviwG + rahGnsgvvra+F +nLppk++ga++rv
       EPX72570.1   8 LYVKAKHLSYQRSKHHIQPNTSLVKVEGCDSKEDAQFYLGKRICFVYKCNKPIRGSKIRVIWGTIARAHGNSGVVRARFVHNLPPKTFGASLRV 101
                      8************************************************999****************************************** PP

                      . CS
  Ribosomal_L35Ae  95 m 95 
                      m
       EPX72570.1 102 M 102
                      9 PP

>> RimM  RimM N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.0   5.5e-05      0.49      44      78 ..      14      50 ..       3      54 .. 0.77
   2 !    6.8   0.0   0.00088       7.9       2      19 ..      69      86 ..      68     106 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 5.5e-05
                EE-EEEEEEE..TTEEEEEETT--SHHHHHTTTT-EE CS
        RimM 44 eltvesvrvh..kkgvivklegvddrdaAealkgael 78
                 l+ ++ ++h   ++ +vk+eg d+ ++A+ + g ++
  EPX72570.1 14 HLSYQRSKHHiqPNTSLVKVEGCDSKEDAQFYLGKRI 50
                35555666666699****************9999888 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.00088
                EEEEEEEETTTTEEEEEE CS
        RimM  2 vGkIvgahGlkGevkVkp 19
                 G+I++ahG  G v+ + 
  EPX72570.1 69 WGTIARAHGNSGVVRARF 86
                59************9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       258  (0.0143901); expected 358.6 (0.02)
Passed bias filter:                      228  (0.0127168); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.24s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 813.44
//
Query:       EPX72571.1  [L=601]
Description: mRNA export receptor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-20   72.0   0.1    5.1e-20   71.1   0.1    1.5  1  RRM_9     RNA recognition motif
    2.8e-20   71.7   2.2    4.9e-20   70.9   0.7    2.2  2  TAP_C     TAP C-terminal domain
    1.6e-07   31.0   0.1      3e-07   30.1   0.1    1.4  1  LRR_9     Leucine-rich repeat
      5e-05   23.6   3.4     0.0006   20.1   0.5    2.8  2  LRR_4     Leucine Rich repeats (2 copies)
     0.0023   17.6   1.3      0.025   14.3   1.3    2.8  1  LRR_8     Leucine rich repeat
  ------ inclusion threshold ------
      0.041   14.5   0.0       0.13   12.8   0.0    2.0  2  NTF2      Nuclear transport factor 2 (NTF2) domain
      0.057   13.1   0.0        0.1   12.3   0.0    1.4  1  DUF1834   Domain of unknown function (DUF1834)


Domain annotation for each model (and alignments):
>> RRM_9  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.1   0.1     2e-23   5.1e-20       1      68 [.      40     106 ..      40     108 .. 0.97

  Alignments for each domain:
  == domain 1  score: 71.1 bits;  conditional E-value: 2e-23
       RRM_9   1 vkveirgwqnaseqdLvsFisRktrvalqnasveggvlvgyVktkkdaeeLlkwnGvrFAGnnLkiei 68 
                 v+v+i+g+++ase+dL+sF++Rk++v+l+n+   +++  ++V  ++d+ +L+ +nG++FAG++L+i+ 
  EPX72571.1  40 VSVVITGHSKASEDDLISFVWRKAKVRLMNLVL-TPASATAVVRSQDFAKLNGLNGTAFAGDRLAIRS 106
                 79*******************************.********************************96 PP

>> TAP_C  TAP C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.94   2.4e+03      25      32 ..     358     365 ..     357     367 .. 0.85
   2 !   70.9   0.7   1.9e-23   4.9e-20       1      49 []     552     600 ..     552     600 .. 0.99

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.94
                 TT-HHHHH CS
       TAP_C  25 nWdyerAl 32 
                 +Wd +rA+
  EPX72571.1 358 GWDSDRAA 365
                 8******8 PP

  == domain 2  score: 70.9 bits;  conditional E-value: 1.9e-23
                 HHHHHHHHHH-B-HHHHHHHHSSTTT-HHHHHHHHHHHG..GGS-GGGB CS
       TAP_C   1 emvqafstqtgMnlewsqkcLeqnnWdyerAlqvFeelkakgkIPpeAF 49 
                 +mv+++  +tg+n  +s++c+eqnnW+y++A+ +F elk +g IPpeAF
  EPX72571.1 552 QMVMKLKLETGLNDHFSRMCCEQNNWNYSQAMTSFLELKNQGVIPPEAF 600
                 8***********************************************9 PP

>> LRR_9  Leucine-rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.1   0.1   1.2e-10     3e-07      69     146 ..     227     315 ..     206     322 .. 0.81

  Alignments for each domain:
  == domain 1  score: 30.1 bits;  conditional E-value: 1.2e-10
       LRR_9  69 lllnnnrivria..egleevlPnleelvltnnelqeladldPla...slkklellsllknpvtnkk......eyrlyviyklkqlrlld 146
                 + l++n i  +a    l+++ P+l +l l+nn++  l dl+P a   ++++l+ l l+ np+++ +      +y++ ++ ++++lrlld
  EPX72571.1 227 VNLSDNNIDSVAsvTTLAQTWPHLLNLSLANNRISTLKDLEPWApktKFPDLQELVLVGNPISQTTyanqllQYQSEMVTRFPKLRLLD 315
                 45667788777622589***********************9875333799************97654444458999************9 PP

>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   3.8   1.4e-05     0.037       5      43 ..     226     267 ..     223     268 .. 0.88
   2 !   20.1   0.5   2.4e-07    0.0006       1      37 [.     248     289 ..     248     295 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 1.4e-05
                 EEE--SS---E-S-...HHH.-TT--EEE-.-S-----GGGGX CS
       LRR_4   5 vLdLsnNqltdipl...lek.lpnLkeLdLsgNnlitdldeLk 43 
                 +++Ls+N++ ++ +   l++  p+L  L+L  Nn+i++l +L+
  EPX72571.1 226 SVNLSDNNIDSVASvttLAQtWPHLLNLSL-ANNRISTLKDLE 267
                 789*******99998888888*********.888**9999987 PP

  == domain 2  score: 20.1 bits;  conditional E-value: 2.4e-07
                 SS--EEE--SS---E-S-HH......H-TT--EEE-.-S---- CS
       LRR_4   1 pnLevLdLsnNqltdiplle......klpnLkeLdLsgNnlit 37 
                 p+L +L+L+nN+++++  le      k+p+L+eL L gN +i+
  EPX72571.1 248 PHLLNLSLANNRISTLKDLEpwapktKFPDLQELVLVGN-PIS 289
                 68999*******888888666788888************.664 PP

>> LRR_8  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   1.3   9.8e-06     0.025       5      61 .]     226     288 ..     222     288 .. 0.72

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 9.8e-06
                 EEE-TTS--SEE-TTS..STT-TT--EEE--SS---GGGGGGGT....T--S-.EEE--SS-- CS
       LRR_8   5 sLdLsnNrltslddea..FkglsnLkvLdLsnNllttlspgafs....gLpsLrsLdLsgNrL 61 
                 s++Ls+N++ s+   +   +++++L  L+L nN+++tl     +     +p L++L L gN++
  EPX72571.1 226 SVNLSDNNIDSVASVTtlAQTWPHLLNLSLANNRISTLKDLEPWapktKFPDLQELVLVGNPI 288
                 689*******99975521566****************95322212222577777777777765 PP

>> NTF2  Nuclear transport factor 2 (NTF2) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       5.4   1.4e+04      29      58 ..     151     180 ..     148     191 .. 0.75
   2 ?   12.8   0.0   5.1e-05      0.13      32     118 ..     416     507 ..     351     509 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 5.4
                 EEEEEETTEEEEESHHHHHHHHHHSSCSCE CS
        NTF2  29 aslltpegsspvkgreaIteffrslpftri 58 
                 +s + p+ ss+ +++e+  +f+ s  ++++
  EPX72571.1 151 KSSSAPPSSSTSNTIEKLKQFLVSRYHSES 180
                 566777777788999999999988887765 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 5.1e-05
                 EEETTEEEEESHHHHHHHHHHSSCSCEEEEEEEEEEEE......TSEGGGCEEEEEEEEEEEETTSCCE.EEEEEEEEEEEETTTEEEEEEEEE CS
        NTF2  32 ltpegsspvkgreaIteffrslpftrielkittvdaqp......deaslstgvlvmvtGelkvddfkkr.rkfsqtfilapqsnkgyfvlnDif 118
                 ++ + s++ +g+eaI++  + lp+tr  ++ ++   +       + +s    + + v G++++ ++k+  r+f ++ ++ p + +g  v+nD++
  EPX72571.1 416 IDEQSSRSHTGQEAIVAAGNALPKTR--HDMSDSSQWLiegwnlILPSIGSAIKIIVHGKFEEPQNKNLtRNFDRVIVILPGGPTGVLVVNDML 507
                 444555899****************5..555444444466777878999999**************866************************8 PP

>> DUF1834  Domain of unknown function (DUF1834)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   3.9e-05       0.1      48      98 ..     355     404 ..     339     416 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 3.9e-05
     DUF1834  48 vfgGetesekvgtsrkrykveatfvvlvaarslrneaaarkgdavevGvyq 98 
                  f+G  +s ++++ r++y  +atf v + + ++r++a + k+d+ + G+y+
  EPX72571.1 355 FFKGW-DSDRAAVIRQVYSPQATFSVSLNSSNIRSKAPSSKSDSLKWGIYK 404
                 57777.6999****************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (601 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       791  (0.0441185); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.60u 0.28s 00:00:00.88 Elapsed: 00:00:00.44
# Mc/sec: 4130.20
//
Query:       EPX72572.1  [L=402]
Description: DNA repair protein Rad60 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.7e-22   77.3   0.1      3e-17   62.2   0.1    2.4  2  Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like
    3.6e-05   23.4   0.2      9e-05   22.1   0.1    1.8  2  ubiquitin  Ubiquitin family
  ------ inclusion threshold ------
      0.011   16.0   0.1          3    8.2   0.0    2.6  2  Mto2_bdg   Micro-tubular organiser Mto1 C-term Mto2-binding r


Domain annotation for each model (and alignments):
>> Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.0   1.3e-05      0.08      12      67 ..     238     290 ..     231     297 .. 0.89
   2 !   62.2   0.1   5.1e-21     3e-17       1      71 [.     331     401 ..     331     402 .] 0.97

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.3e-05
                 -EEEEEETTSBHHHHHHHHHHHHT----TT-EEEETTEE--TTSBGGGSS--TTEE CS
   Rad60-SLD  12 evkikVkptttvskLieayrkkkgipeeqkvrLiFDGeeLdpnstvedldiedgdt 67 
                 ++ +kVk++ +++ + +ay  +k+i+    v+++F++++L +  t++ +++ + dt
  EPX72572.1 238 PLLFKVKSNQQFRRVRDAYTARKRIQD---VVFVFQNRKLWDFGTPKGAGMLKIDT 290
                 6779*********************99...**********9999999998877665 PP

  == domain 2  score: 62.2 bits;  conditional E-value: 5.1e-21
                 EEEEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEEETTEE--TTSBGGGSS--TTEEEEEE CS
   Rad60-SLD   1 ikiilkgkdgkevkikVkptttvskLieayrkkkgipeeqkvrLiFDGeeLdpnstvedldiedgdtidvv 71 
                 i+i ++ k+g++v++++  +t v+++i++y+++ +i+ ++ +rL F+G++L+p++t+e+l+ied+d+i ++
  EPX72572.1 331 ISILVRPKKGQDVRLSIPVNTSVEDIIRKYCNQTEISFHEGIRLEFEGDWLEPKDTLENLEIEDEDQISIL 401
                 6899****************************************************************987 PP

>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.3     8e+03      13      34 ..     241     262 ..     239     274 .. 0.77
   2 !   22.1   0.1   1.5e-08     9e-05       1      67 [.     333     400 ..     333     402 .] 0.92

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.3
                 EEEETTSBHHHHHHHHHHHHTS CS
   ubiquitin  13 leveesdtveelKekiaekegi 34 
                 ++v+++++ + + +++ ++++i
  EPX72572.1 241 FKVKSNQQFRRVRDAYTARKRI 262
                 5788888888888887777665 PP

  == domain 2  score: 22.1 bits;  conditional E-value: 1.5e-08
                 EEEEETTSEEEEEEEETTSBHHHHHHHHHHHHTSSGGGE.EEEETTEEE-TTSBHGGHTTSTTEEEEE CS
   ubiquitin   1 itvktldgkkitleveesdtveelKekiaekegipaeqq.rLiysGkvLedertleeygiqdgstlhl 67 
                 i+v+  +g+++ l+++ +++ve++  k++ +++i  ++  rL ++G  Le + tle + i+d++++  
  EPX72572.1 333 ILVRPKKGQDVRLSIPVNTSVEDIIRKYCNQTEISFHEGiRLEFEGDWLEPKDTLENLEIEDEDQISI 400
                 567777899************************9988877************************9976 PP

>> Mto2_bdg  Micro-tubular organiser Mto1 C-term Mto2-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.1    0.0049        30       4      17 ..     138     151 ..     136     187 .. 0.78
   2 ?    8.2   0.0   0.00049         3      10      35 ..     240     266 ..     238     275 .. 0.75

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.0049
    Mto2_bdg   4 eRLreLerqLkaer 17 
                 +RL+eL rq k  r
  EPX72572.1 138 KRLEELDRQVKEFR 151
                 7********99877 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.00049
    Mto2_bdg  10 erqLkaer.eaRlldrsgarerLeelk 35 
                  ++ k+++  +R +d   ar+r+++  
  EPX72572.1 240 LFKVKSNQqFRRVRDAYTARKRIQDVV 266
                 5889****44788***********964 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (402 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       735  (0.040995); expected 358.6 (0.02)
Passed bias filter:                      470  (0.0262145); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2831.81
//
Query:       EPX72573.1  [L=886]
Description: aminopeptidase Ape2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.4e-81  273.2   1.4    1.4e-81  273.2   1.4    1.7  2  Peptidase_M1    Peptidase family M1 domain
    1.1e-76  258.5   0.1      2e-76  257.6   0.1    1.5  1  ERAP1_C         ERAP1-like C-terminal domain
    1.9e-48  165.1   0.1      7e-48  163.3   0.0    1.9  2  Peptidase_M1_N  Peptidase M1 N-terminal domain
  ------ inclusion threshold ------
      0.096   12.2   0.8       0.22   11.1   0.8    1.6  1  P53_TAD         P53 transactivation motif
       0.15   12.1   0.3       0.65   10.0   0.1    2.3  2  Lip_prot_lig_C  Bacterial lipoate protein ligase C-terminus


Domain annotation for each model (and alignments):
>> Peptidase_M1  Peptidase family M1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       1.5   5.2e+03     124     172 ..     163     213 ..     139     217 .. 0.56
   2 !  273.2   1.4   3.9e-85   1.4e-81       1     218 []     249     465 ..     249     465 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 1.5
                   CHHHHHHHHTSTTHHHSS.GG-GSHHH.HHHTSSHHHHHHHHHHHHHHHHH CS
  Peptidase_M1 124 eveealsedaldeshpit.qevekpse.idevFdsiaYeKGasllrmlekl 172
                   +++ ++s d +++s+  + ++++ ++e i++  ++  ++K +++  +l ++
    EPX72573.1 163 ALKATFSIDITAKSNYTIlSNMNINEEvIKDDMKTARFAKTCRMSTYLLAW 213
                   456677777777766555444444444156666777777777777666655 PP

  == domain 2  score: 273.2 bits;  conditional E-value: 3.9e-85
                   HHHHHHHHHHHHHHHHHTS--SSSEEEEEEESSTTSSEEEETTEEEEEGGGC-SSTTTS-HHHHHHHHHHHHHHHHHHHBTTTEEESSGGGGHHHHH CS
  Peptidase_M1   1 yalevtkkllefleeyfkvpYplpkldlvalpdfsagAMEnwglityreelllvdpenssesdkrsvaeviaHElaHqWfGnlVtmkwWddlwLnEG 97 
                   +a + ++k+++f++  f+  Yplpk+d+va+pdf+agAMEnwglityr +++lv  e s+++  ++vaev+ HElaHqWfGnlVtm+ Wd lwLnEG
    EPX72573.1 249 FAADLGAKTIDFFSGAFNEAYPLPKCDMVAIPDFEAGAMENWGLITYRLSAILVS-EDSAATVIQRVAEVVQHELAHQWFGNLVTMQFWDGLWLNEG 344
                   688999************************************************9.7777889********************************** PP

                   HHHHHHHHHHHHHSCCCHCHHHHHHHCHHHHHHHHTSTTHHHSSGG-GSHHHHHHTSSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHCTTEEE CS
  Peptidase_M1  98 fatyleylildklepewevseqllleeveealsedaldeshpitqevekpseidevFdsiaYeKGasllrmlekllgeevFqkglksYlkefkykna 194
                   fat++++ ++++++pew+v+e+++++e+++al+ dal++shpi++ + ++ ei+++Fd+i+Y+KG++++rm++k++ge+vF +g+++Y+++++y+n+
    EPX72573.1 345 FATWMSWFSCHNFYPEWKVWESYVTDELQSALALDALRSSHPIEVPIIHEYEINQIFDAISYSKGSCVIRMISKYVGEDVFIRGIQKYISRHRYNNT 441
                   ************************************************************************************************* PP

                   -HHHHHHHHHHCCCSCHHTHHHHH CS
  Peptidase_M1 195 etedlwdaleealnkdisevmdtw 218
                    tedlw a++e++++dis++m++w
    EPX72573.1 442 ITEDLWAAISEESGQDISTMMKCW 465
                   ***********************9 PP

>> ERAP1_C  ERAP1-like C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  257.6   0.1   5.5e-80     2e-76       2     313 ..     545     862 ..     544     864 .. 0.95

  Alignments for each domain:
  == domain 1  score: 257.6 bits;  conditional E-value: 5.5e-80
                 EEESGGG-SSSEEEE-HHHHHHHHHHHH..GGGS-HHHHHHHHHHHHHHHHTTSS-HHHHHHGGG.GGGG--SHHHHHHHHHHHHHHHHHHT..TSTTH CS
     ERAP1_C   2 vllNdddtGyyrVnYdeeslaalleqll..skklspldRaglisdafalaragelsaadlldlllgylanEtdylvwsqalsqlatlkslls..adply 96 
                 ++lN++++G yrV+Y +++l++l + +   +++ls++dRagli+d+++l+rag+ ++++ ldl++++ ++E +++v++++l++l+ +ks+l+  ++++ 
  EPX72573.1 545 YKLNSEQSGIYRVQYTADHLKKLAKVAVekPEFLSVEDRAGLIADVASLSRAGYGNVSSTLDLAKTW-KEEPSFVVFTEILARLNGIKSTLRfeKPEIV 642
                 79**********************943368*************************************.7********************99874455** PP

                 HHHHHHHHHHHHHHHHHHHH..T.TTS-HHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHCSTT.-S-HHHHHHHHHHHHHHS-HHHHHHHHHHHHC- CS
     ERAP1_C  97 aalkaflrklleplaeklgw..epgeshldaqlrslllsaacaagdpevveearklfkawlegdd.lippdlrwavycalaanggeaewdallerykdt 192
                 +alk+f++++ +  a+klgw  +++++h  +q++s+++++a+ +gd++vv+ a k+f+a+++gd+ +i+ +lr++v+ +++++g+++ wd+ll++yk++
  EPX72573.1 643 EALKKFILEISSVKAHKLGWsfDSSDDHISRQFKSTVFGFAGVNGDKKVVSDAIKMFEAYAAGDKkAINDNLRSSVFIIAVRHGDPKCWDQLLDIYKKS 741
                 ********************65567***********************************9998855*****************************999 PP

                 SSHHHHHHHHHHHCC-S-HHHHHHHHHHCTTT..S-GGGHHHHHHHH.HSTTHHHHHHHHHHHCHCCHHHHTS.STSCHHHHHHHHHTT--SHHHHHHH CS
     ERAP1_C 193 sapsekeaalralaatpdpellerllnfvlesdevrnqdlrallaglannpegrellwefvkenwdalakrws.ggeildrivkgllpgftseeelaei 290
                 ++p  ++ +lra ++t++ e +e++l+++l ++ v+ qdl+ +l++l+++++g   +w+f +++w+++ kr++  g++ +++v+++++gft +++++ i
  EPX72573.1 742 NDPYVRTNCLRAFGYTENDEYIEKTLQLAL-DPIVKEQDLYLVLSSLSSHKKGVVNMWKFATTHWEQILKRLPiAGTMRGHVVRIITGGFTHKSDIETI 839
                 99****************************.99**************999**********************9334566******************** PP

                 HHHHCHTT--GGGHHHHHHHHHH CS
     ERAP1_C 291 eaffadkdtpglrrtlkqaletv 313
                 ++ffa++d + ++r+l+q+l+++
  EPX72573.1 840 KKFFANQDIKLYERALQQSLDSI 862
                 *********************98 PP

>> Peptidase_M1_N  Peptidase M1 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.3   0.0   1.9e-51     7e-48       1     186 []      29     210 ..      29     210 .. 0.94
   2 ?   -1.4   0.0      0.62   2.2e+03      95     112 ..     546     563 ..     536     571 .. 0.83

  Alignments for each domain:
  == domain 1  score: 163.3 bits;  conditional E-value: 1.9e-51
                     EEEEEEEEEEEETTTTEEEEEEEEEEEESS-ECEEEEEESSEEEECEEEEECTTCTCEEEEEEEECTTTTCEEEEECCEEETTCEEEEEEEEEEE CS
  Peptidase_M1_N   1 vpehYdldlkidlkektfkGsvtitlqlkeatseivldakdlkiksvslsaevksesvkidfkieqkdeelltiklkeslqqtskytLeieyege 95 
                     +p hYdl+l +dl+++++ G+v+++l++ +++++i+l+  +l i    lsa  +   ++i +++ ++++e +++++++ + ++s + L+ +++g 
      EPX72573.1  29 KPIHYDLSLYPDLETFAYGGNVNVSLDVIQDSDTITLHGINLRI----LSAALEWGHQTIWTNNVTYRDERIILQFSSIVPANSVAVLKLAFTGV 119
                     699*****************************************....66666677777777788899999*******9999************* PP

                     -BSSSSEEEEEEEEE.TSCEEEEEEEE-TTTTGGGTS-B--STTSEBEEEEEEEEETTSEEEESSECCCEEEETTCEEEEEEEEEESBEGGG CS
  Peptidase_M1_N  96 lndklaGlykstYtd.kgekkvvvvTqfeatdARsafPCfDePsvKAtftisikapkeetalSnmpeeeseklengqkiteFeqtpkmstYL 186
                     +++ ++G+y+s+Y+d +g++k++++Tq+e+t+AR+afPC+DeP+ KAtf+i i+a++++t+lSnm+++e+  ++ + k+ +F++t++mstYL
      EPX72573.1 120 ISKGMEGFYRSSYVDaDGKTKYLATTQMEPTSARRAFPCWDEPALKATFSIDITAKSNYTILSNMNINEEVIKD-DMKTARFAKTCRMSTYL 210
                     ***************99999***********************************************9777775.688*************9 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.62
                     E-BSSSSEEEEEEEEETS CS
  Peptidase_M1_N  95 elndklaGlykstYtdkg 112
                     +ln +  G+y+ +Yt + 
      EPX72573.1 546 KLNSEQSGIYRVQYTADH 563
                     679999********9854 PP

>> P53_TAD  P53 transactivation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.8   6.1e-05      0.22       1      13 [.     529     541 ..     529     541 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 6.1e-05
     P53_TAD   1 sdlgleLPLSQET 13 
                 s+ ++eLPLSQE+
  EPX72573.1 529 SERSVELPLSQES 541
                 67799*******8 PP

>> Lip_prot_lig_C  Bacterial lipoate protein ligase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       2.7   9.5e+03      53      67 ..     634     648 ..     621     652 .. 0.69
   2 ?   10.0   0.1   0.00018      0.65      33      85 .]     826     880 ..     819     880 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 2.7
                     SBSSHHHHHHHHHTS CS
  Lip_prot_lig_C  53 vkyekeaieealeki 67 
                      ++ek +i eal+k+
      EPX72573.1 634 LRFEKPEIVEALKKF 648
                     468888999998876 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00018
                     EEESBSSSSHCHHHHHHHTT..SBSSHHHHHHHHHTSCHHHHCCTHHHHHHHHHH CS
  Lip_prot_lig_C  33 iyGDffgpkdieeleekLig..vkyekeaieealekidlseyfggieleellell 85 
                     i+G f ++ die +++ + +  +k+ + a+++ l++i+ s+ f + +l +++e+l
      EPX72573.1 826 ITGGFTHKSDIETIKKFFANqdIKLYERALQQSLDSISSSSSFIEKSLTDITEWL 880
                     8899**************9955677799**************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (886 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       532  (0.0296726); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.66u 0.27s 00:00:00.93 Elapsed: 00:00:00.42
# Mc/sec: 6268.41
//
Query:       EPX72574.1  [L=378]
Description: galactosylxylosylprotein 3-beta- galactosyltransferase Pvg1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.2e-10   40.2   0.2    0.00038   20.3   0.1    3.2  2  Galactosyl_T  Galactosyltransferase
  ------ inclusion threshold ------
      0.023   14.1   0.0      0.037   13.5   0.0    1.3  1  Fringe        Fringe-like


Domain annotation for each model (and alignments):
>> Galactosyl_T  Galactosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.0     2e-05      0.18       2      89 ..      74     159 ..      73     186 .. 0.80
   2 !   20.3   0.1   4.2e-08   0.00038      79     192 ..     201     296 ..     190     299 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2e-05
  Galactosyl_T   2 rRnaiRktWmn..ekeaegnriktlFlvGlsakedkkvkelvmeeaklygDivvvdledsYenltlKtltlllwavskvpeaklilkvDd 89 
                   rR+ +R+   +   + a++ +i   F++G ++ + + ++  + ee++lygD+ v+ + ++ ++   Kt++++++  +   ++ l+ kv d
    EPX72574.1  74 RRRLLREDYHHyiREVAKKDKIDLKFVLGVPN-SHEGLAT-IREEQRLYGDLEVLPIGENVDR--GKTVVYFQTFLKGYRSYPLLSKVAD 159
                   6666666654411233455899*********9.7777888.9*************99999886..8999999999999999999998865 PP

  == domain 2  score: 20.3 bits;  conditional E-value: 4.2e-08
  Galactosyl_T  79 peaklilkvDdDvyvnpdkLlsllkrelidpsessvygkvlkegavirkkkskwyvseeeykfsryppyasGtlYvlsreavekllkaskhrkflkl 175
                   +e+++i kvDdD yvn + Lls+l  + i+++e ++            +++s+   +e  ++    +py+ G +Yv+s +++ +++  s+++ +++ 
    EPX72574.1 201 DEYDFIAKVDDDAYVNLPLLLSELRPH-IGEDEFYFG-----------RDCSR---KELPTSVR-QFPYMCGFAYVVSPDIAYRIA--SQRKLYFPW 279
                   689*********************999.443333332...........22222...22223333.357999999999999999996..556679999 PP

  Galactosyl_T 176 eDvlvGilaedlgvsrv 192
                   eD+  G+ +++ +v+ +
    EPX72574.1 280 EDAQTGYNINRNNVKNI 296
                   99999999999888876 PP

>> Fringe  Fringe-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   4.1e-06     0.037      88     126 ..     204     242 ..     189     276 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 4.1e-06
      Fringe  88 kWfchvDDDnylnveaLlklLskynhtqdvylGkpsldr 126
                   + +vDDD y+n++ Ll+ L+ +  ++++y G+   ++
  EPX72574.1 204 DFIAKVDDDAYVNLPLLLSELRPHIGEDEFYFGRDCSRK 242
                 56789****************************976554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (378 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       546  (0.0304535); expected 358.6 (0.02)
Passed bias filter:                      468  (0.026103); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 2642.06
//
Query:       EPX72575.1  [L=249]
Description: SAGA complex subunit Sgf29 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-33  115.4   0.0    2.6e-33  114.9   0.0    1.2  1  DUF1325   SGF29 tudor-like domain
  ------ inclusion threshold ------
      0.089   12.8   0.0       0.17   11.9   0.0    1.4  1  DUF4537   Domain of unknown function (DUF4537)
       0.13   12.7   0.0       0.93   10.0   0.0    2.1  2  Agenet    Agenet domain


Domain annotation for each model (and alignments):
>> DUF1325  SGF29 tudor-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.9   0.0   4.4e-37   2.6e-33       2     131 ..     122     247 ..     121     248 .. 0.93

  Alignments for each domain:
  == domain 1  score: 114.9 bits;  conditional E-value: 4.4e-37
     DUF1325   2 geeVaakekkkekeeeeewilaeVvk.iegkknrYeveDadpde.ekekkkyklsaksiiplpkskakpesklaefpkgkkVLAlYPeTTtFYkAeVva 98 
                 g +Va++  ++ ++e +ewi++ + k   + kn+Yev+D++pd+ +++++ y++sa+++i +p ++ +    l+ + +g++VLA+YPeTTtFYkAeV++
  EPX72575.1 122 GMSVAFRLPRTPDNEGGEWIQCIINKvTGDPKNKYEVQDPEPDDdGNPGQVYRTSANNLIYIPPKTVS----LPSLGPGTTVLARYPETTTFYKAEVIR 216
                 789***99999999************7555699*********998888899************99999....99************************* PP

     DUF1325  99 spkkkekeyklkFeddeeedkereVerrlVvel 131
                   +  ++ +kl+Fe++ee++ke++Ver+lV+++
  EPX72575.1 217 --TLPSGACKLRFEGEEEAGKETTVERHLVLDY 247
                 ..558*************************986 PP

>> DUF4537  Domain of unknown function (DUF4537)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   2.8e-05      0.17       1      36 [.     196     235 ..     196     248 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 2.8e-05
     DUF4537   1 gqkVlaRreeDGfYyrgtvkkrlngrqylvef....eaee 36 
                 g+ VlaR+ e  ++y++ v+ +l ++    +f    ea +
  EPX72575.1 196 GTTVLARYPETTTFYKAEVIRTLPSGACKLRFegeeEAGK 235
                 789********************99999999955433333 PP

>> Agenet  Agenet domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   0.00016      0.93      15      43 ..     138     168 ..     134     185 .. 0.74
   2 ?   -0.3   0.0      0.26   1.5e+03      17      45 ..     209     236 ..     206     244 .. 0.68

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00016
      Agenet  15 GaWfrAtilkv..kegdkylVeYddlddddg 43 
                 G W  + i kv  + ++ky+V+ +++ddd +
  EPX72575.1 138 GEWIQCIINKVtgDPKNKYEVQDPEPDDDGN 168
                 68*********664446*****999555444 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.26
      Agenet  17 WfrAtilkvkegdkylVeYddlddddgsk 45 
                 +++A ++++  ++ ++ +++  +++ g++
  EPX72575.1 209 FYKAEVIRTLPSGACKLRFEG-EEEAGKE 236
                 689999999666889999988.3333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       588  (0.032796); expected 358.6 (0.02)
Passed bias filter:                      514  (0.0286686); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 1732.43
//
Query:       EPX72576.1  [L=440]
Description: BAR adaptor protein Hob1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-62  211.3   3.1      2e-62  210.9   3.1    1.1  1  BAR       BAR domain
    4.2e-14   51.9   0.0    7.6e-14   51.0   0.0    1.5  1  SH3_1     SH3 domain
    1.6e-10   40.7   0.1    2.6e-10   40.0   0.1    1.4  1  SH3_9     Variant SH3 domain
    5.5e-09   35.6   0.1      1e-08   34.7   0.1    1.5  1  SH3_2     Variant SH3 domain
  ------ inclusion threshold ------
      0.025   14.6   3.7        3.4    7.8   0.0    2.6  2  BRE1      BRE1 E3 ubiquitin ligase
      0.036   13.6   3.1      0.081   12.5   2.5    1.7  2  Vps5      Vps5 C terminal like


Domain annotation for each model (and alignments):
>> BAR  BAR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  210.9   3.1   6.8e-66     2e-62       1     238 [.       6     246 ..       6     247 .. 0.98

  Alignments for each domain:
  == domain 1  score: 210.9 bits;  conditional E-value: 6.8e-66
         BAR   1 lkKafnRasqlleekvgkaekTkLDedFeelerrldvteklieklvkelkeylqanpgarakqivleklkeqplelLaesmieagkelgedssfg.... 95 
                 +kK++ Ra+q++++k++ +e+Tk D+++e++ rr++++e++ +kl +++k+y++a++g++++q+            +a+++ie++ ++++++s+     
  EPX72576.1   6 FKKSVVRAPQTFRSKFNIGEQTK-DPVYEDAGRRFKSLETEAKKLSDDSKKYTEAIRGLLNHQV-----------GFADACIEIYNPISGQASNPesyh 92 
                 89*********************.****************************************...........*****************9445699 PP

         BAR  96 ........kalekygeavkklaqteeelekrvetnfldplrellekefkeiqkerkklehkrlDyDaakarlkklktkkskkakde...ekaeeelrkA 183
                         +a e+y+++v +l   ++++ + +++++++p+  ll k++++++k ++k++hk++DyD+++++lkkl++kk++++kde   ++ae+ +++A
  EPX72576.1  93 legseegvQAAEAYKDVVHDLESSLASELEVIQSRVVEPTGALL-KIIRDVDKLLTKRDHKQIDYDRHRSTLKKLQEKKDRSLKDEkrlYEAETSFDQA 190
                 ********************************************.****************************************************** PP

         BAR 184 qqkfeesneelkaeLpnllalevefv.nqlqafveaqldfhkqaaqlleqlqqqls 238
                 +q++e++ne++k+eLp l++le+ef+ + +qa++++ql+++  ++q+++++ + ++
  EPX72576.1 191 SQEYEYYNEMVKEELPRLFELEQEFIaPLFQALYYMQLNIFWILYQKMSNCNIPYF 246
                 ***************************************************99887 PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.0   0.0   2.6e-17   7.6e-14       1      47 [.     384     430 ..     384     431 .. 0.96

  Alignments for each domain:
  == domain 1  score: 51.0 bits;  conditional E-value: 2.6e-17
                 EESSSBEXSSTTBXEBSTTEEEEEEEECSS..SEEEEEETTSTEEEEEE CS
       SH3_1   1 iAlYDYeaeesdELsfkkGDviivleksed..gWwkgrlkgtgkeGliP 47 
                 +AlYDY+a+ +++Lsf+ GD i+++++s++  +Ww gr++  g eG +P
  EPX72576.1 384 TALYDYTAQAAGDLSFRVGDRIEIVSRSNNqnEWWIGRVH--GYEGQFP 430
                 59**************************************..58****9 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.0   0.1   8.8e-14   2.6e-10       1      49 []     385     435 ..     385     435 .. 0.93

  Alignments for each domain:
  == domain 1  score: 40.0 bits;  conditional E-value: 8.8e-14
       SH3_9   1 AlypyepreddeLsLqrGDvitvieese..dgWlegsltGrtGlvPanyve 49 
                 Aly+y+++ +  Ls+++GD+i + ++s+  + W+ g+ +G  G +P nyv+
  EPX72576.1 385 ALYDYTAQAAGDLSFRVGDRIEIVSRSNnqNEWWIGRVHGYEGQFPGNYVQ 435
                 8**********************9665445********************7 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.7   0.1   3.5e-12     1e-08       1      55 [.     382     435 ..     382     437 .. 0.88

  Alignments for each domain:
  == domain 1  score: 34.7 bits;  conditional E-value: 3.5e-12
                 EEEESS-B-SCGCCB--B-TTEEEEEE..EEEECT..TEEEEEECCCEEEEEGCGEE CS
       SH3_2   1 yvraiedyvgedkseLsfkkGdvikvlslgskdsd..gwwegevgGrvGlfPsslve 55 
                 yv a+ dy+++  + Lsf++Gd i ++   s++++  +ww+g+v+G  G fP ++v+
  EPX72576.1 382 YVTALYDYTAQAAGDLSFRVGDRIEIV---SRSNNqnEWWIGRVHGYEGQFPGNYVQ 435
                 566888*********************...5555556*******************8 PP

>> BRE1  BRE1 E3 ubiquitin ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.0    0.0011       3.4      47      80 ..      32      65 ..      20      76 .. 0.87
   2 ?    5.3   2.4     0.007        21      41      93 ..     147     195 ..     134     197 .. 0.80

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0011
        BRE1 47 yfaamrskdalenelkkLnkllsKsselieqLke 80
                y +a r  ++le+e kkL+   +K +e i  L +
  EPX72576.1 32 YEDAGRRFKSLETEAKKLSDDSKKYTEAIRGLLN 65
                88999**********************9988866 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.007
        BRE1  41 akadqkyfaamrskdalenelkkLnkllsKsselieqLkelekefvrklkele 93 
                 +k d k+ + +r++      lkkL+++ ++s +  ++L e+e++f +  +e+e
  EPX72576.1 147 TKRDHKQIDYDRHRS----TLKKLQEKKDRSLKDEKRLYEAETSFDQASQEYE 195
                 566666666666654....5689999999999999999999999999888876 PP

>> Vps5  Vps5 C terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.51   1.5e+03      22      57 ..      28      63 ..      16      82 .. 0.71
   2 ?   12.5   2.5   2.7e-05     0.081     131     201 ..     143     210 ..      96     214 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.51
        Vps5 22 qDewFedkkqeldslesqLkkLykaiellvsqrkel 57
                +D+ +ed+  ++ sle++ kkL++  +   +  + l
  EPX72576.1 28 KDPVYEDAGRRFKSLETEAKKLSDDSKKYTEAIRGL 63
                577777788888888888888877666655555555 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 2.7e-05
        Vps5 131 vklwqkwqsaeqelskkkeqleKlekaaksqqdklqqlkkeveelerkvqeaekeFeeisetikkEler.Fe 201
                  kl  k  +++ ++ + +++l+Kl+ +    +d+  + +k + e+e+  ++a++e+e   e +k+El r Fe
  EPX72576.1 143 DKLLTKRDHKQIDYDRHRSTLKKLQEK----KDRSLKDEKRLYEAETSFDQASQEYEYYNEMVKEELPRlFE 210
                 6777888899999***********999....7899999*****************************86355 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (440 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1079  (0.0601818); expected 358.6 (0.02)
Passed bias filter:                      473  (0.0263818); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 3203.71
//
Query:       EPX72577.1  [L=496]
Description: cysteine desulfurase Nfs1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.6e-92  309.2   0.0    4.4e-92  308.9   0.0    1.1  1  Aminotran_5      Aminotransferase class-V
    0.00019   20.8   0.0    0.00029   20.2   0.0    1.2  1  Beta_elim_lyase  Beta-eliminating lyase
     0.0017   17.6   0.0     0.0024   17.1   0.0    1.3  1  Aminotran_1_2    Aminotransferase class I and II
  ------ inclusion threshold ------
      0.013   14.8   0.0      0.019   14.3   0.0    1.2  1  DegT_DnrJ_EryC1  DegT/DnrJ/EryC1/StrS aminotransferase family
      0.033   14.2   0.1       0.42   10.7   0.0    2.3  2  B12-binding      B12 binding domain


Domain annotation for each model (and alignments):
>> Aminotran_5  Aminotransferase class-V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  308.9   0.0   1.2e-95   4.4e-92       1     370 [.      99     460 ..      99     461 .. 0.97

  Alignments for each domain:
  == domain 1  score: 308.9 bits;  conditional E-value: 1.2e-95
                  EEEBTTTS----HHHHHHHHHHHHCTCCSSSSSSSHHHHHHHHHHHHHHHHHHHHHT-STGGGEEEESSHHHHHHHHHHHCCCC.-TTTSEEEEETTS CS
  Aminotran_5   1 iyldsaAttqkpqeVldalqeyytdynanvhrsvhhlgkeatkaveearekvaelinaeseeeiiftsGtteainlvalslars.lkpgdeivvteae 97 
                  iy+d +At+++  +Vld++  y+t  ++n+h+ +h++g+ea kave+are+va++i+a+   eiiftsG+te++n++++++ar  ++++++i+ +++e
   EPX72577.1  99 IYMDFQATSPLDYRVLDSMLPYLTGVYGNPHSRTHEYGWEAEKAVEKAREEVAAVIKADP-REIIFTSGATESNNTILKGVARFyQNRKKHIISVQTE 195
                  8**********************************************************7.************************************* PP

                  HGGGTHHHHHHHHHHTEEEEEEEBETTSCBEGGGHHHH--TTEEEEEEESBETTTTEB--HHHHHHHHHHTT-EEEEE-TTTTTTS---HHHHTESEE CS
  Aminotran_5  98 hhanlvpwqelakrtgakvkvipldeegeldldelekllnektklvaithvsnvtGtiqpveeigklakkkgalvlvDaaqavghipidvkklgvDfl 195
                  h++ l   + l+ ++g++v+++p++ +g++ ld+l+k+++++t lv++++v+n++G+iqp+eeigk+++++++++++D+aq++g+ip+dv+k+++D++
   EPX72577.1 196 HKCVLDSLRTLQ-EEGFDVTFLPVQTNGLISLDDLKKAIRPDTVLVSVMAVNNEIGVIQPLEEIGKICRANKVFFHTDGAQGFGKIPLDVDKMNIDLM 292
                  *****8888886.88*********************************************************************************** PP

                  EEETTTTTSSTT-EEEEEEHHHHHTS..SS.STTSEEEEETTEEEEHCTTGGGS.SS--HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCT CS
  Aminotran_5 196 afsghKllgPtGiGvlyvrkellekleplllggemveevsleettfaeapskfeaGTpnvagiiglgaaleyleeigleaiekhekelaeyllerlks 293
                  ++sghK++gP+G+G+ ++r++  ++l pll gg+       +e++       +++GT   + i+g+g+a++++ + +++  ++h  +l+++l ++l +
   EPX72577.1 293 SISGHKIYGPKGVGAAFIRRRPRVRLSPLLSGGG-------QERG-------LRSGTLAPPLIVGFGTAARLC-REEMAYDHEHISKLSKRLIDGLLA 375
                  **********************************.......9999.......9********************.8999999***************** PP

                  STTEEEES.-B-CTCBSEEEEEETTCSHHHHHHHHHHTTEEEEEE-TTT....HHHHHHTT.S.......-EEEEE--TTS-HHHHHH CS
  Aminotran_5 294 lpgvrlygpdkaerrasivsfnfkgvhaedvatlLdeegIavrsGhhca....qplmkrlale.......gtvRaSlyiynteeevdr 370
                  +p + l+g d++ r +++v+++f +v+ e + + L++  Ia++sG++c+    +p+++++a+        +++R+++++y+te+e+d+
   EPX72577.1 376 IPYTSLNG-DPKSRFPGCVNISFSYVEGESLLMGLKN--IALSSGSACTsaslEPSYVLRAIGqndedahSSIRFGIGRYTTEAEIDY 460
                  ******99.9*******************99888876..**********999999999998889999999****************95 PP

>> Beta_elim_lyase  Beta-eliminating lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.0     8e-08   0.00029      31     169 ..     140     274 ..     132     298 .. 0.82

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 8e-08
                      -HHHHHHHHHHHHHTT-S..EEEEES-HHHHHHHHH....HHH--TTEEEEEETT-HHHHSSTTHHHHCC--EEEEE-EBTTTBE-HHHHHHHS CS
  Beta_elim_lyase  31 dktvnrLedavaelfgke..aalfvpqGtaAnsill....killqrgeevivtepahihfdetgaiaelagvklrdlknkeaGkmdlekleaai 118
                      +k v++  ++va+++ ++   ++f+   t +n+  l    +   +r++ +i  ++ h +        + +g  ++ l+ + +G ++l++l++ai
       EPX72577.1 140 EKAVEKAREEVAAVIKADprEIIFTSGATESNNTILkgvaRFYQNRKKHIISVQTEHKCVLDSLRTLQEEGFDVTFLPVQTNGLISLDDLKKAI 233
                      5677888888888887766577888888999999996664444578889999999998888886666789999999999999************ PP

                      --S-TTS-EEEEEEEESSBTTTTTB---HHHHHHHHHHHHHCT-EEEEEET CS
  Beta_elim_lyase 119 kevgaheekiklisltvTnntagGqvvsleelrevaaiakkygiplhlDgA 169
                      ++  +    + l+s+   nn     +  ++ l+e+ +i++++++ +h DgA
       EPX72577.1 234 RP--D----TVLVSVMAVNNE----IGVIQPLEEIGKICRANKVFFHTDGA 274
                      **..4....678888777774....456677888999*************9 PP

>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   6.7e-07    0.0024      49     187 ..     146     272 ..     137     376 .. 0.85

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 6.7e-07
                    HHHHHHHHHCTCTTCHTTGGEGEEEESHHHHHHHHH....HHHHHHTTT-EEEEEESS-THHHHHHHH...TTSEEEEEEBEETTTTEE-HHHHHH CS
  Aminotran_1_2  49 leealakflgrseklklkreaavvvgsGagalieal....ifllklnpgdeilvpdptyasyknilrl...sggevvryplyseedfhldlealee 137
                    ++e++a  ++       ++  +++++sGa++ ++++    +++   n+++ i++ +  +  + + lr     g+ v   p+  + +  + l++l++
     EPX72577.1 146 AREEVAAVIK------ADPR-EIIFTSGATESNNTIlkgvARFY-QNRKKHIISVQTEHKCVLDSLRTlqeEGFDVTFLPV--QTNGLISLDDLKK 231
                    5666666666......7888.9*******998887622214555.7**************999887762215677777774..499********** PP

                    HHTTHHCTTETEEEEEEESS-TTT--B--HHHHHHHHHHHHHTTEEEEEE CS
  Aminotran_1_2 138 alkeapegnkktkvilvesphNPtGtvatleeleklldlakkynlllfvD 187
                    a++        t ++ v  ++N  G++ +lee+ k+   +++++++   D
     EPX72577.1 232 AIRP------DTVLVSVMAVNNEIGVIQPLEEIGKI---CRANKVFFHTD 272
                    ***9......788***********************...99999876555 PP

>> DegT_DnrJ_EryC1  DegT/DnrJ/EryC1/StrS aminotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   5.4e-06     0.019      80     150 ..     206     278 ..     138     286 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 5.4e-06
                      HHHTT-EEEEE-B-TTTSSB-GGGCGGG--TTE..EEEEEB-G.GGB---HHHHHHHHHHCT-EEEEE-TT-TT CS
  DegT_DnrJ_EryC1  80 vlelgakpvfvDvdpdtynidpaaieaaitert..kaIlpVhl.yGqvadmdalkaiaakhglkvieDaAhAlG 150
                       +e g ++ f+ v+ +   i+ +++++ai + t    +++V+   G +  ++++ +i+++ ++ +  D A+++G
       EPX72577.1 206 LQEEGFDVTFLPVQ-TNGLISLDDLKKAIRPDTvlVSVMAVNNeIGVIQPLEEIGKICRANKVFFHTDGAQGFG 278
                      56667777788777.6789**************987888886438****************************9 PP

>> B12-binding  B12 binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.14   5.1e+02      40      83 ..     145     190 ..     131     193 .. 0.74
   2 ?   10.7   0.0   0.00012      0.42      23      61 ..     205     247 ..     197     267 .. 0.78

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.14
  B12-binding  40 n..edivaairaekpdvvglSalltsqleavkelvellkrirprvk 83 
                  +  e+++a i+a   +++  S    s+ +  k ++++ + ++++++
   EPX72577.1 145 KarEEVAAVIKADPREIIFTSGATESNNTILKGVARFYQNRKKHII 190
                  2447888888888888888899888888888888888777777766 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00012
  B12-binding  23 alrdagfeVqllganven.edivaairaekpdvvglSal...l 61 
                   l+++gf+V++l ++++    + +  +a +pd v++S++    
   EPX72577.1 205 TLQEEGFDVTFLPVQTNGlISLDDLKKAIRPDTVLVSVMavnN 247
                  6899************9888888888899*********74440 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (496 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       570  (0.0317921); expected 358.6 (0.02)
Passed bias filter:                      485  (0.0270511); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.59u 0.24s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 3582.81
//
Query:       EPX72578.1  [L=302]
Description: bromodomain containing protein 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.5e-16   58.7   0.0    1.7e-15   56.8   0.0    1.9  2  Bromodomain   Bromodomain
      0.003   17.1   3.2     0.0051   16.4   3.2    1.3  1  Allexi_40kDa  Allexivirus 40kDa protein
     0.0099   14.6   5.1      0.014   14.1   5.1    1.1  1  Ndc1_Nup      Nucleoporin protein Ndc1-Nup
  ------ inclusion threshold ------
      0.012   15.1   1.3       0.26   10.7   1.3    2.3  2  Tam41_Mmp37   Phosphatidate cytidylyltransferase, mitochondri
        0.3   11.3   4.2       0.57   10.4   4.2    1.4  1  MPM1          Mitochondrial peculiar membrane protein 1
       0.54    9.0   9.0       0.74    8.6   9.0    1.2  1  Fmp27_WPPW    RNA pol II promoter Fmp27 protein domain
        0.8    9.7  11.6       0.42   10.6   9.4    1.7  2  Rootletin     Ciliary rootlet component, centrosome cohesion
        2.1    7.0   5.9        2.6    6.7   5.9    1.1  1  Presenilin    Presenilin
        3.3    7.7   6.4        3.3    7.8   1.3    2.7  2  Prp18         Prp18 domain
        4.3    7.6  10.1          2    8.6   0.7    3.1  3  FlaG          FlaG protein


Domain annotation for each model (and alignments):
>> Bromodomain  Bromodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       2.9   5.1e+03       7      29 ..      25      48 ..      23      55 .. 0.59
   2 !   56.8   0.0   9.7e-19   1.7e-15       4      79 ..     201     276 ..     197     280 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 2.9
                 HBHTTTCGGGGCSTT.-GCCSTTH CS
  Bromodomain  7 ellehklaepFlepv.dpeefpdy 29
                 e+l++ + +pFl  + d+ e++  
   EPX72578.1 25 EILKRLSESPFLLEPlDTHELKRI 48
                 566777667776443366666554 PP

  == domain 2  score: 56.8 bits;  conditional E-value: 9.7e-19
                  HHHHBHTTTCGGGGCSTT-GCCSTTHHHH.SS---HHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHSHTTSHHH CS
  Bromodomain   4 ilsellehklaepFlepvdpeefpdyyavikkPldLstIkkklesnkYksladfeadlkllfsNarkyngegsviy 79 
                  +l+++ +h + +pF++pv+++e  dy++ i  P dL t+k+ +++++ +++++++ ++ ++f N+++yng ++  +
   EPX72578.1 201 LLDNISNHRFGAPFSQPVNRKEAQDYDSLIYCPQDLRTVKNMVREGTLTTVEEVYREVLRIFANCKMYNGADTSSA 276
                  789*******************************************************************998766 PP

>> Allexi_40kDa  Allexivirus 40kDa protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   3.2   2.8e-06    0.0051      51     248 ..      13     215 ..       8     220 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 2.8e-06
  Allexi_40kDa  51 LeWLthishdvdsiinklnpvslls...qttlLselrdalrtltklldklksvekklelsaetasds..kllkklesietsleelhakldelssset 142
                   L+   h++ + ++i+++l ++  l    +t +L ++ d+  t  +  +k++++ +k +  +++a++s  +++ + ++i+  ++el++ ++   +s +
    EPX72578.1  13 LDLKRHLGDNQEEILKRLSESPFLLeplDTHELKRIYDQAVTNLEPEEKIERDLNKDRPITDHATKSdeRPQLREDVINDLINELNNCIKSYNASLE 109
                   55667*************98876655668999*****999988889999999998887666655554005555668999999999999999999988 PP

  Allexi_40kDa 143 sesegPsssptkassaeaaasedLpiyqakhPtarCrtyGtvlfngvslriPmDi...lGrpastaLrLevkvtlseqattvkykllDdGalLlsde 236
                   +++e+ ++++++++ a +++++   + +a+   ++ r   + ++++ ++    Di    G  as a r + + ++s+++ + ++k + +  l l d+
    EPX72578.1 110 QQTEERTKANEQDEEALQETAN--DTENASKNLQSDRGLPEEVHEELESSHSPDIdapSGPVASRATRATSRRQTSQEEDKTSLKKFQNAILPLLDN 204
                   8888877776666665555655..577899999999999999998887776667744458899********************************** PP

  Allexi_40kDa 237 ietkhklqkpls 248
                   i+ +h++  p+s
    EPX72578.1 205 IS-NHRFGAPFS 215
                   96.688887776 PP

>> Ndc1_Nup  Nucleoporin protein Ndc1-Nup
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   5.1   7.7e-06     0.014     341     491 ..      92     221 ..      88     226 .. 0.64

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 7.7e-06
    Ndc1_Nup 341 klikeltqrinergqpapkaapskapknkasapvkelprlsksplkkkddeifgn.sltaeaspkssssskegvekalsslakspgqs.psptarlspr 437
                 +li+el++ i+++ ++  ++     ++++++a+++++  l+++           n + +a+++ +s++  +e+v++ l s  + + ++ + p+a+   r
  EPX72578.1  92 DLINELNNCIKSYNASLEQQ-----TEERTKANEQDEEALQETA----------NdTENASKNLQSDRGLPEEVHEELESSHSPDIDApSGPVAS---R 172
                 57888888888888822222.....2222333333333332111..........12344557788888899999998888888888775444443...2 PP

    Ndc1_Nup 438 arkllekaksrllskeqkealsestikkkvekelaqllkspligylFrqslrrr 491
                 a    ++a+sr ++++++ + s ++ ++ + + l ++++   +g++F+q+ +r+
  EPX72578.1 173 A----TRATSRRQTSQEEDKTSLKKFQNAILPLLDNISNHR-FGAPFSQPVNRK 221
                 2....445556666677777777888888888888888889.********9997 PP

>> Tam41_Mmp37  Phosphatidate cytidylyltransferase, mitochondrial
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   1.3   0.00015      0.26     198     281 ..      43     146 ..      40     207 .. 0.72
   2 ?    2.1   0.0      0.06   1.1e+02     185     225 ..     235     276 ..     229     298 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00015
  Tam41_Mmp37 198 eefrelYkplleelenvellekekekeee...kkleqdlspearaellrkLPkklrskllskyekkl..................skkkkdeeeflkk 274
                  +e++++Y++++++le +e +e + +k++    +  + d +p+ r +++++L ++l++ ++s  + +l                  +++ +d+e++ k+
   EPX72578.1  43 HELKRIYDQAVTNLEPEEKIERDLNKDRPitdHATKSDERPQLREDVINDLINELNNCIKSY-NASLeqqteertkaneqdeealQETANDTENASKN 139
                  68899999999999999888887766655777888899999999999999988887665443.44443444555444444444444444444444444 PP

  Tam41_Mmp37 275 iakdeel 281
                  + +d+ l
   EPX72578.1 140 LQSDRGL 146
                  4444444 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.06
  Tam41_Mmp37 185 nknKvkniVe.kqleefrelYkplleelenvellekekekee 225
                  + + vkn+V+ + l++ +e+Y+++l+ ++n ++ +  +++++
   EPX72578.1 235 DLRTVKNMVReGTLTTVEEVYREVLRIFANCKMYNGADTSSA 276
                  556799***86799****************999988876654 PP

>> MPM1  Mitochondrial peculiar membrane protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   4.2   0.00032      0.57      31     151 ..      58     194 ..      55     199 .. 0.64

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00032
        MPM1  31 Pnsevpeellkkk.....kkklkdeiltkEdvendkkhkyGlFFkeftdyLnWksemkelikekreeeikkkkeeekkkkese........ktkedlml 116
                 P+++++++l+k++      +k++++   +Edv nd  ++     k+++  L+ ++e++ +++e+ ee+ ++ ++++++++++         + +e+l+ 
  EPX72578.1  58 PEEKIERDLNKDRpitdhATKSDERPQLREDVINDLINELNNCIKSYNASLEQQTEERTKANEQDEEALQETANDTENASKNLqsdrglpeEVHEELES 156
                 66666666665541111122334456679**************************************99999888888877774455444333333333 PP

        MPM1 117 kkssekds.....kkkvvssssktsv..ntteegneeklkev 151
                 ++s          +  v s+++  +   +t++e+++++lk++
  EPX72578.1 157 SHS----PdidapSGPVASRATRATSrrQTSQEEDKTSLKKF 194
                 333....14444666777776655440044444444555554 PP

>> Fmp27_WPPW  RNA pol II promoter Fmp27 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   9.0   0.00041      0.74     170     280 ..      84     196 ..      51     208 .. 0.71

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00041
  Fmp27_WPPW 170 rvqkelleeRleeleeqiekleekleelelkseke....deelkeeieelekeikelkeklefletlledlkeseesse......eeeskskelsaast 258
                 ++ ++++++ ++el++ i++ + +le++++++ k     +e+l+e  +++e+ +k+l++ + + e+++e+l++s++++               +s+a++
  EPX72578.1  84 QLREDVINDLINELNNCIKSYNASLEQQTEERTKAneqdEEALQETANDTENASKNLQSDRGLPEEVHEELESSHSPDIdapsgpV-------ASRATR 175
                 556667777777777777766666666665555555555999********************************997765543330.......333333 PP

  Fmp27_WPPW 259 sesfseldelasseesaseFkn 280
                 + s +++++ ++ ++s ++F+n
  EPX72578.1 176 ATSRRQTSQ-EEDKTSLKKFQN 196
                 333333333.445555555555 PP

>> Rootletin  Ciliary rootlet component, centrosome cohesion
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   9.4   0.00023      0.42      44     127 ..      56     142 ..       9     163 .. 0.64
   2 ?   -2.2   0.0         2   3.5e+03      55      55 ..     198     198 ..     168     259 .. 0.52

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00023
   Rootletin  44 selektkltlllssareleeeesadl................eealakLeeErqrseklaqvnslLreqleearqaneaLtedlqkltkdwerlreele 126
                  e+e++           +e++ ++d                 e +++ L +E + + k  + n+ L +q ee ++ane+ +e lq + +d e++ ++l+
  EPX72578.1  56 LEPEEK-----------IERDLNKDRpitdhatksderpqlrEDVINDLINELNNCIK--SYNASLEQQTEERTKANEQDEEALQETANDTENASKNLQ 141
                 222222...........222222222333333333344445799************99..*********************************999987 PP

   Rootletin 127 q 127
                 +
  EPX72578.1 142 S 142
                 6 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 2
   Rootletin  55 l 55 
                  
  EPX72578.1 198 I 198
                 0 PP

>> Presenilin  Presenilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   5.9    0.0014       2.6     214     309 ..      93     188 ..      79     240 .. 0.49

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0014
  Presenilin 214 LiYsatvvvlaaeekkaevaeseeeeeaekkkeeasesskeeeseeesseksaqsse.....seeeseeesseaessaeesseekeseessesseeeee 307
                 Li + +  + + +     ++ ++++ee++k++e+++e+ +e+++++e+++k+ qs++      +ee e+++s++ ++++ + ++++++++s++++++ee
  EPX72578.1  93 LINELNNCIKSYN-----ASLEQQTEERTKANEQDEEALQETANDTENASKNLQSDRglpeeVHEELESSHSPDIDAPSGPVASRATRATSRRQTSQEE 186
                 5555555554332.....223333333333333333333333333333333333333343222222222222222222222222222222222222222 PP

  Presenilin 308 ee 309
                 ++
  EPX72578.1 187 DK 188
                 22 PP

>> Prp18  Prp18 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   1.3    0.0018       3.3       4      63 ..      97     155 ..      94     158 .. 0.83
   2 ?    1.5   0.3      0.15   2.7e+02      23      53 ..     179     209 ..     169     277 .. 0.71

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0018
       Prp18   4 lkkllkewekeleerseeekksvegkkesatlkqtkedlkpLlkklkk.kkleedileklv 63 
                 l++++k+++ +le+++ee  +++++++++++l++t++d ++  k+l++ + l+e++ e+l+
  EPX72578.1  97 LNNCIKSYNASLEQQTEE--RTKANEQDEEALQETANDTENASKNLQSdRGLPEEVHEELE 155
                 5778999*******9887..56667888889999999999999999863789999998875 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.15
       Prp18  23 kksvegkkesatlkqtkedlkpLlkklkkkk 53 
                 +++++++++++ lk+ ++ + pLl+++ +++
  EPX72578.1 179 RRQTSQEEDKTSLKKFQNAILPLLDNISNHR 209
                 4555556666677777777777777776654 PP

>> FlaG  FlaG protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.7    0.0011         2      19      61 ..      75     117 ..      58     119 .. 0.81
   2 ?    1.0   6.2      0.26   4.7e+02      17      50 ..     109     142 ..     105     158 .. 0.62
   3 ?    0.9   0.0       0.3   5.3e+02      15      41 ..     175     201 ..     164     217 .. 0.55

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0011
                 ---SS-------HHHHHHHHHHHHHHHTTSS--EEEEEEEETT CS
        FlaG  19 kaekaeeekevseeeleeaveklnkklsslnteleFsvdedtk 61 
                  a k++e+ +++e+ +++++++ln+ ++s+n +le + +e tk
  EPX72578.1  75 HATKSDERPQLREDVINDLINELNNCIKSYNASLEQQTEERTK 117
                 456677777888888*******************988888876 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.26
                 -----SS-------HHHHHHHHHHHHHHHTTSS- CS
        FlaG  17 eekaekaeeekevseeeleeaveklnkklsslnt 50 
                 e+++e++++++e++ee l+e++++ +++ ++l++
  EPX72578.1 109 EQQTEERTKANEQDEEALQETANDTENASKNLQS 142
                 5666666666666666677766666666665543 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.3
                 HS-----SS-------HHHHHHHHHHH CS
        FlaG  15 seeekaekaeeekevseeeleeavekl 41 
                  +++++++++ee+++s ++ ++a+  l
  EPX72578.1 175 RATSRRQTSQEEDKTSLKKFQNAILPL 201
                 333444444555555555555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2240  (0.124937); expected 358.6 (0.02)
Passed bias filter:                      883  (0.0492498); expected 358.6 (0.02)
Passed Vit filter:                       111  (0.00619109); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.58u 0.29s 00:00:00.86 Elapsed: 00:00:00.40
# Mc/sec: 2271.85
//
Query:       EPX72579.1  [L=1586]
Description: ubiquitin-protein ligase E3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.4e-09   36.5   9.0    4.4e-09   36.5   9.0    2.7  2  zf-RING_2     Ring finger domain
    6.5e-07   29.5   6.0      2e-06   28.0   6.0    1.9  1  zf-rbx1       RING-H2 zinc finger domain
      2e-06   27.8   5.2    7.9e-06   26.0   5.2    2.0  1  FANCL_C       FANCL C-terminal domain
    6.2e-06   26.0   8.7    2.2e-05   24.2   8.7    2.1  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
    1.2e-05   25.3   2.6    2.8e-05   24.1   2.6    1.6  1  zf-ANAPC11    Anaphase-promoting complex subunit 11 RING-H2 f
    7.8e-05   22.4   7.4    7.8e-05   22.4   7.4    2.3  1  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
    0.00043   19.9   5.9     0.0011   18.6   5.9    1.6  1  Zn_ribbon_17  Zinc-ribbon, C4HC2 type
     0.0056   16.4   3.5      0.018   14.8   3.5    2.0  1  zf-RING_11    RING-like zinc finger
     0.0064   16.5   5.3      0.031   14.3   5.3    2.4  1  zf-RING_UBOX  RING-type zinc-finger
     0.0086   16.2   7.5       0.02   15.0   7.5    1.7  1  RINGv         RING-variant domain
  ------ inclusion threshold ------
      0.038   13.8   6.3       0.12   12.3   6.3    1.9  1  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
       0.17   12.2   9.6       0.53   10.6   8.3    2.5  2  zf-RING-like  RING-like domain
       0.59   10.2   2.0        1.4    9.0   2.0    1.6  1  HypA          Hydrogenase/urease nickel incorporation, metall
       0.92    9.4  10.1        0.3   11.0   3.6    2.9  2  C1_1          Phorbol esters/diacylglycerol binding domain (C
        2.9    7.8   7.0        7.3    6.5   7.0    1.7  1  Prok-RING_4   Prokaryotic RING finger family 4


Domain annotation for each model (and alignments):
>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.1       6.5   7.8e+03      14      32 ..    1371    1387 ..    1365    1391 .. 0.68
   2 !   36.5   9.0   3.7e-12   4.4e-09       2      44 .]    1533    1580 ..    1532    1580 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 6.5
   zf-RING_2   14 dsvlllpCgHvfhreCler 32  
                  d++++l C +++ ++Cl++
  EPX72579.1 1371 DRTRCL-CTYIY-YQCLRH 1387
                  456666.87765.789876 PP

  == domain 2  score: 36.5 bits;  conditional E-value: 3.7e-12
   zf-RING_2    2 eCpICleelssadsvl..ll.pCgHvfhreClerwlrssst..CPlCr 44  
                  eC+IC++ ls +++++  ++  C+H fh +Cl +w++ss+   CPlCr
  EPX72579.1 1533 ECAICYSVLSVERTLPnkRCsTCRHKFHASCLYKWFKSSNAsrCPLCR 1580
                  9**********9999876444699**************9999*****9 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   6.0   1.7e-09     2e-06       2      55 .]    1533    1580 ..    1530    1580 .. 0.74

  Alignments for each domain:
  == domain 1  score: 28.0 bits;  conditional E-value: 1.7e-09
     zf-rbx1    2 tCaiCrneleeacieckapgdeecpvvlGeCgHaFHlhCiskWlkt..rkvCPlcr 55  
                  +CaiC   ++   +e + p+++     +++C+H+FH  C+ kW+k+   ++CPlcr
  EPX72579.1 1533 ECAIC---YSVLSVERTLPNKR-----CSTCRHKFHASCLYKWFKSsnASRCPLCR 1580
                  56666...34444555555555.....578****************76667****8 PP

>> FANCL_C  FANCL C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   5.2   6.6e-09   7.9e-06       4      48 ..    1533    1575 ..    1530    1583 .. 0.92

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 6.6e-09
                  S-SSS--SS-TT-----B--S-TT----B-SGGGHHHHHHHHSSS CS
     FANCL_C    4 eCgiCyayrldsgevpdisCdnekCnkkfHsaCLkeWlrslkesr 48  
                  eC iCy+    + ++p++ C    C +kfH++CL+ W++s + sr
  EPX72579.1 1533 ECAICYSVLSVERTLPNKRCS--TCRHKFHASCLYKWFKSSNASR 1575
                  8*******999*********6..7****************99987 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   8.7   1.8e-08   2.2e-05       1      41 []    1534    1579 ..    1534    1579 .. 0.97

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 1.8e-08
                  -TTT-S--SS-E......E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4    1 CpiCleeakepn.....elleCkHsfCskCirkilksrkkvkCPlC 41  
                  C+iC ++++ +      + ++C+H+f+ +C+ k+ ks+++  CPlC
  EPX72579.1 1534 CAICYSVLSVERtlpnkRCSTCRHKFHASCLYKWFKSSNASRCPLC 1579
                  *********99999999********************99999**** PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   2.6   2.3e-08   2.8e-05      31      83 ..    1538    1585 ..    1521    1586 .] 0.77

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 2.3e-08
                  TTS--TTCSTTTTTS-EEEBTTS-EEEHHHHHHHHHHHSTSSB-TTTSSB--B CS
  zf-ANAPC11   31 fdGtcpsckfpGddcplvlGkckhnfhlhcilkwletetskglcpmcrqtfkl 83  
                  +     + ++p   c+    +c+h+fh+ c++kw+++++  ++cp+cr +f++
  EPX72579.1 1538 YSVLSVERTLPNKRCS----TCRHKFHASCLYKWFKSSN-ASRCPLCRSSFTF 1585
                  5555556666666665....7**************9766.579******9986 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   7.4   6.5e-08   7.8e-05       1      40 []    1533    1579 ..    1533    1579 .. 0.85

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 6.5e-08
  zf-C3HC4_2    1 kCpiCldmlkdpsvvt.....pCgHvfCqkCilrsLeekn..eCPlC 40  
                  +C+iC+ +l+   ++       C H+f+++C+ ++ +++n  +CPlC
  EPX72579.1 1533 ECAICYSVLSVERTLPnkrcsTCRHKFHASCLYKWFKSSNasRCPLC 1579
                  6*******99754443556669****************9999***** PP

>> Zn_ribbon_17  Zinc-ribbon, C4HC2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   5.9   9.1e-07    0.0011       5      46 ..    1532    1577 ..    1529    1580 .. 0.83

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 9.1e-07
  Zn_ribbon_17    5 ksCayCe..lavkgrv..vlcgvCeHvlHasCarewfenddlaeCp 46  
                    ++Ca+C   l+v++ +    c  C H  HasC+ +wf+  + + Cp
    EPX72579.1 1532 EECAICYsvLSVERTLpnKRCSTCRHKFHASCLYKWFKSSNASRCP 1577
                    57999953377877763347*************************9 PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   3.5   1.5e-05     0.018       1      29 []    1533    1564 ..    1533    1564 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.5e-05
  zf-RING_11    1 eCsICLeefkpgqal...filpCsHtFHfkCI 29  
                  eC+IC + + ++ +l   ++  C H FH  C+
  EPX72579.1 1533 ECAICYSVLSVERTLpnkRCSTCRHKFHASCL 1564
                  9*********99965443777899*******5 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   5.3   2.6e-05     0.031       1      39 []    1534    1577 ..    1534    1577 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 2.6e-05
  zf-RING_UBOX    1 CpIClelft....dP.lv.lpCGHtFCreClwelskslegafkCP 39  
                    C IC+++++     P +   +C H F+ +Cl ++++++++a +CP
    EPX72579.1 1534 CAICYSVLSvertLPnKRcSTCRHKFHASCL-YKWFKSSNASRCP 1577
                    *********877755645446**********.7899********9 PP

>> RINGv  RING-variant domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   7.5   1.6e-05      0.02       1      48 []    1534    1579 ..    1534    1579 .. 0.88

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 1.6e-05
                  ETTTTEE-SSSS--B-SS--STCCCSB-HHHHHHHHHHTCT-SB-TTT CS
       RINGv    1 CriCleeeeeseplispCkCrGslklvHesClekWldekeantqCeiC 48  
                  C iC+   + +++l ++ +C+   + +H sCl kW+++ ++ ++C +C
  EPX72579.1 1534 CAICYSVLSVERTLPNK-RCSTCRHKFHASCLYKWFKS-SNASRCPLC 1579
                  99999998888866554.8999999*************.********* PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   6.3   9.7e-05      0.12       3      47 ..    1532    1583 ..    1531    1586 .] 0.84

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 9.7e-05
                  SB-TTTSS......SBS-EEETTEEEEEE-HHHHHHHHH..TT-B-TTT--B- CS
  zf-C3HC4_3    3 eeCviCle......rprnvvllpCgHlvlCeeCaekllk..rkkkCpiCrrpi 47  
                  eeC iC++      +  n  +  C+H  +  +C+ k+ k  +  +Cp+Cr++ 
  EPX72579.1 1532 EECAICYSvlsverTLPNKRCSTCRHK-FHASCLYKWFKssNASRCPLCRSSF 1583
                  58******666554466677778****.99********999*********975 PP

>> zf-RING-like  RING-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       2.7   3.2e+03      18      36 ..     431     449 ..     426     451 .. 0.78
   2 ?   10.6   8.3   0.00044      0.53      12      43 .]    1550    1579 ..    1534    1579 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 2.7
  zf-RING-like  18 sCnvrlHvdCfqhyirths 36 
                   +C +   ++C+q+ +r++ 
    EPX72579.1 431 QCPILEFDKCLQNIFRKND 449
                   666677789******8765 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00044
  zf-RING-like   12 vrCsnesCnvrlHvdCfqhyirthsskkCpkC 43  
                     rCs  +C+ ++H  C+ + +++++  +Cp C
    EPX72579.1 1550 KRCS--TCRHKFHASCLYKWFKSSNASRCPLC 1579
                    5899..9**************99999*****9 PP

>> HypA  Hydrogenase/urease nickel incorporation, metallochaperone, hypA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   2.0    0.0012       1.4      42      95 ..    1522    1582 ..    1513    1586 .] 0.78

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.0012
                  HHHHHHHHHHHCC.TTTT-EEEEEEE--EEEETTTS-EEECHH.HHH........S-TTTSSS CS
        HypA   42 eaLefafellaegtvlegaeLeieevpvkvrCreCgkefelee.kal........rCpkCgsa 95  
                  + +++ fe ++e  ++  ++L++e++  + rC++C+++f+ +  +          rCp C s+
  EPX72579.1 1522 RNISMHFEGVEECAICY-SVLSVERTLPNKRCSTCRHKFHASClY-KwfkssnasRCPLCRSS 1582
                  56777888888887777.9********************976442.135667778*****985 PP

>> C1_1  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.1      0.34     4e+02      11      24 ..     907     920 ..     902     926 .. 0.76
   2 ?   11.0   3.6   0.00025       0.3       8      44 ..    1528    1565 ..    1523    1574 .. 0.88

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.34
                 --B-TTT-SB--SS CS
        C1_1  11 ptfCkhCgeflwgk 24 
                   fC+ C+++++++
  EPX72579.1 907 NDFCQRCENLFKRL 920
                 579******99663 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00025
                  -SS--B-TTT-SB--S.SSS-EEEETTT--EE-CCCCT CS
        C1_1    8 fkqptfCkhCgeflwg.kekqglkCswCkllvHkkChe 44  
                  f+    C+ C + l+    ++  +Cs+C+ ++H +C+ 
  EPX72579.1 1528 FEGVEECAICYSVLSVeRTLPNKRCSTCRHKFHASCLY 1565
                  566788********888*******************86 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   7.0    0.0061       7.3      10      39 ..    1549    1582 ..    1534    1584 .. 0.70

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0061
  Prok-RING_4   10 kailepCgHlvCkeCfdsk....dlssCPlCqrr 39  
                   + + + C H +  +C+ ++    + s+CPlC++ 
   EPX72579.1 1549 NKRCSTCRHKFHASCLYKWfkssNASRCPLCRSS 1582
                   556789****9999987776433666*****986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1586 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       691  (0.0385409); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                        20  (0.00111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.92u 0.27s 00:00:01.19 Elapsed: 00:00:00.48
# Mc/sec: 9904.72
//
Query:       EPX72580.1  [L=286]
Description: hypothetical protein SOCG_00343 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.17   12.4   0.4        2.6    8.6   0.1    2.5  2  DUF4093   Domain of unknown function (DUF4093)


Domain annotation for each model (and alignments):
>> DUF4093  Domain of unknown function (DUF4093)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.1   0.00014       2.6      31      72 ..     177     220 ..      99     224 .. 0.82
   2 ?    1.6   0.0     0.022   3.9e+02      50      80 ..     249     279 ..     239     281 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00014
     DUF4093  31 edLlelgLvggads..kkrReklgekLgigyangkqllkrLnmf 72 
                 ++L+e+g + +a    k++R  lg +  +g+ +  ql ++Ln +
  EPX72580.1 177 KELIEVGIYVQALGkgKNKRPYLGVYQTFGKSSVEQLQRQLNSY 220
                 68899999887754559*************************98 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.022
     DUF4093  50 klgekLgigyangkqllkrLnmfkitkeefe 80 
                 +lg++L+ig+ n+ + l ++++f+ + ++++
  EPX72580.1 249 RLGARLKIGNKNSFTKLFKMKRFHKSHKDLK 279
                 7999*****8888777777787777766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       699  (0.0389871); expected 358.6 (0.02)
Passed bias filter:                      468  (0.026103); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2205.68
//
Query:       EPX72581.1  [L=95]
Description: inner membrane protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.6e-14   53.0   8.4    6.6e-14   51.7   8.4    1.7  1  Cmc1            Cytochrome c oxidase biogenesis protein Cmc1 
    0.00037   20.1   2.8    0.00037   20.1   2.8    2.0  2  NDUF_B7         NADH-ubiquinone oxidoreductase B18 subunit (N
  ------ inclusion threshold ------
       0.09   12.4   0.1      0.092   12.4   0.1    1.1  1  Citrate_ly_lig  Citrate lyase ligase C-terminal domain


Domain annotation for each model (and alignments):
>> Cmc1  Cytochrome c oxidase biogenesis protein Cmc1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.7   8.4   1.1e-17   6.6e-14       1      62 [.       1      61 [.       1      87 [. 0.94

  Alignments for each domain:
  == domain 1  score: 51.7 bits;  conditional E-value: 1.1e-17
        Cmc1  1 mhkklkkkarkeCaelikalaeChkdrllkvvgkCneekeamkkClkeyrtderlkdaekdr 62
                mh++l+ + +k+Ca li al+eCh+ ++ k++g+Cn +k  +k+Cl + r++++++++ek+ 
  EPX72581.1  1 MHPHLDINNQKRCAHLILALEECHR-HYGKFLGECNSIKYSLKECLNQDRNEKAKVNREKAL 61
                9************************.*****************************9888874 PP

>> NDUF_B7  NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   2.8   6.2e-08   0.00037      12      60 ..       5      53 ..       1      56 [. 0.89
   2 !    5.9   1.3    0.0018        11      26      62 ..      40      76 ..      36      77 .. 0.94

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 6.2e-08
     NDUF_B7 12 lplkeRDyCAhlLiplnkCrrenfplpwkCehekhayekCqyedyvrRm 60
                l +++  +CAhl ++l++C r+   +  +C+  k + ++C ++d  ++ 
  EPX72581.1  5 LDINNQKRCAHLILALEECHRHYGKFLGECNSIKYSLKECLNQDRNEKA 53
                66777789********************************999976665 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0018
     NDUF_B7 26 plnkCrrenfplpwkCehekhayekCqyedyvrRmke 62
                 l++C ++      k ++ek   +k+  ++y rRm+e
  EPX72581.1 40 SLKECLNQDRNEKAKVNREKALQQKASSREYRRRMEE 76
                5899*******************************97 PP

>> Citrate_ly_lig  Citrate lyase ligase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   1.5e-05     0.092     126     176 ..      38      88 ..       2      92 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.5e-05
  Citrate_ly_lig 126 nqalkevlekaeievveierkekeeelisaskvrkllkeknleklaelvPk 176
                       +lke l++ + e  +++r ++ ++  s+ + r+ ++e++ ek++el+ +
      EPX72581.1  38 KYSLKECLNQDRNEKAKVNREKALQQKASSREYRRRMEEQEAEKIQELLRS 88 
                     4479999***99***********************************9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2436  (0.135869); expected 358.6 (0.02)
Passed bias filter:                      732  (0.0408277); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.27s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 677.78
//
Query:       EPX72582.1  [L=467]
Description: multicopy membrane protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.15   12.1   0.1       0.15   12.1   0.1    2.2  3  Vma12     Endoplasmic reticulum-based factor for assembly of 
       0.24   10.7  18.3        2.2    7.6   0.6    2.3  2  TssN      Type VI secretion system, TssN


Domain annotation for each model (and alignments):
>> Vma12  Endoplasmic reticulum-based factor for assembly of V-ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   1.7e-05      0.15      82     106 ..     210     237 ..     171     252 .. 0.79
   2 ?   -2.8   0.5      0.66   5.9e+03     105     114 ..     416     425 ..     370     448 .. 0.56
   3 ?   -2.9   0.0      0.75   6.7e+03      37      50 ..     436     449 ..     431     456 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 1.7e-05
       Vma12  82 NiliSvvavffavwialrsartp...sl 106
                  i++Sv+++ + +++a+r++r+p   s+
  EPX72582.1 210 FIFLSVISSCIGFYWAIRWFRNPqkvSF 237
                 599*****************77654433 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.66
       Vma12 105 slpvrvllsl 114
                 s+  +++ ++
  EPX72582.1 416 SETLKIIYGV 425
                 4444444443 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 0.75
       Vma12  37 reYkrlinsvdpsq 50 
                 +eY++++n ++ ++
  EPX72582.1 436 NEYEQMVNVDTLNN 449
                 699***99855444 PP

>> TssN  Type VI secretion system, TssN
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.6   0.00024       2.2      83     149 ..     194     260 ..     189     276 .. 0.77
   2 ?    7.2  11.4   0.00032       2.8      35     150 ..     326     444 ..     295     447 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.00024
        TssN  83 kffkelkekkilfeilltlivillglvlfvlvfnllselqygvwaatsllvfiipllflktykalls 149
                 ++++  ++++  ++ ++++++++ +++ f+    ++++ q   +    ll++ i +lf+   k+ + 
  EPX72582.1 194 RYKSGDHKDTTQISRFFIFLSVISSCIGFYWAIRWFRNPQKVSFTQLLLLTWYIAFLFNHPIKQSVF 260
                 5666667777788999999999999999999999999999777777788888888888877666655 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.00032
        TssN  35 iyiLlaglvlalpgllgflknefvpygyillqily....lllGilhlylllkkffkelkekk.ilfeilltlivillglvlfvlvfnllselqygvwaa 128
                  +i++a lv+ +++++g  k +   ++++l+++ y    +++G+l      k++ +  +    i+++++++l++++++l +++     +  ++ ++ ++
  EPX72582.1 326 AFIICAPLVFPILSIFGSSKAKSLQVSWMLFNFGYipsvFFIGYLITD--RKSVLPGTSRVAnIVKHMVFILLSTCVSLSIYMNSAASFDYISETLKII 422
                 689999************888888888877777651111567777766..5555565555556**********************99999999999999 PP

        TssN 129 tsllvfiipllflktykallsI 150
                   +l f + + fl  y++++++
  EPX72582.1 423 YGVLYFCVAVGFLNEYEQMVNV 444
                 9******************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (467 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       680  (0.0379274); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 3134.51
//
Query:       EPX72583.1  [L=1095]
Description: cell agglutination protein mam3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-42  145.0   2.3    2.8e-42  143.7   2.3    1.7  1  DIPSY     Cell-wall adhesin ligand-binding C-terminal
  ------ inclusion threshold ------
       0.84    9.6  14.8    1.8e+02    2.1   0.1    8.2  9  XPB_DRD   Xeroderma pigmentosum group B helicase damage recog


Domain annotation for each model (and alignments):
>> DIPSY  Cell-wall adhesin ligand-binding C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.7   2.3   3.1e-46   2.8e-42       1     122 []     970    1092 ..     970    1092 .. 0.98

  Alignments for each domain:
  == domain 1  score: 143.7 bits;  conditional E-value: 3.1e-46
       DIPSY    1 nDsisPsYvyldsneyaiaastegdeesenvFyYDstikRivtCcdvrPvYrvdedDkkassfeieknndGtftfk..essvseplelkvladgrvg 95  
                  nD+isPsYv+ld+n+yaia+s+  +++se++F+YDs++kRivtCcdv+P+Yr+d+ D++a+s+ei k++dG+f+fk  ++ vs++lel +l+dgr+g
  EPX72583.1  970 NDDISPSYVHLDENNYAIASSN--YTNSEHTFVYDSDSKRIVTCCDVKPIYRMDQADREAYSLEIFKDDDGQFQFKysDNGVSHSLELLTLTDGRIG 1064
                  9*********************..****************************************************888899*************** PP

       DIPSY   96 its......peydseveslderkfRaenvvlka 122 
                  +t+      p+y+s +e +     R+envvl+a
  EPX72583.1 1065 VTTdlekfkPFYSSGSERE-----RSENVVLRA 1092
                  ********99****99999.....*******97 PP

>> XPB_DRD  Xeroderma pigmentosum group B helicase damage recognition domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.15   1.3e+03       5      16 ..     450     461 ..     449     471 .. 0.81
   2 ?   -0.7   0.0      0.15   1.3e+03       5      16 ..     501     512 ..     500     522 .. 0.81
   3 ?    1.0   0.0     0.043   3.8e+02       6      21 ..     553     568 ..     551     573 .. 0.83
   4 ?    2.1   0.0     0.021   1.9e+02       5      21 ..     590     606 ..     589     611 .. 0.83
   5 ?    2.1   0.0     0.021   1.9e+02       5      21 ..     628     644 ..     627     649 .. 0.83
   6 ?   -0.7   0.0      0.15   1.4e+03       5      16 ..     666     677 ..     665     686 .. 0.81
   7 ?    2.1   0.0     0.021   1.9e+02       5      21 ..     717     733 ..     716     738 .. 0.83
   8 ?    2.1   0.1      0.02   1.8e+02       5      21 ..     755     771 ..     754     777 .. 0.83
   9 ?   -4.1   0.0       1.7   1.5e+04       6      16 ..     938     948 ..     937     954 .. 0.78

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.15
                 TTEEEECSSSTT CS
     XPB_DRD   5 rGTllidgdprg 16 
                 +GT+lid++ ++
  EPX72583.1 450 AGTVLIDTPSPT 461
                 7*******9986 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.15
                 TTEEEECSSSTT CS
     XPB_DRD   5 rGTllidgdprg 16 
                 +GT+lid++ ++
  EPX72583.1 501 AGTVLIDTPSPT 512
                 7*******9986 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.043
                 TEEEECSSSTT...-C CS
     XPB_DRD   6 GTllidgdprgkaslp 21 
                 GT+lid++ ++++++ 
  EPX72583.1 553 GTVLIDTPSPSPSWVT 568
                 9*********988865 PP

  == domain 4  score: 2.1 bits;  conditional E-value: 0.021
                 TTEEEECSSSTT...-C CS
     XPB_DRD   5 rGTllidgdprgkaslp 21 
                 +GT+lid++ ++++++ 
  EPX72583.1 590 AGTVLIDTPSPSPSWVT 606
                 7**********988865 PP

  == domain 5  score: 2.1 bits;  conditional E-value: 0.021
                 TTEEEECSSSTT...-C CS
     XPB_DRD   5 rGTllidgdprgkaslp 21 
                 +GT+lid++ ++++++ 
  EPX72583.1 628 AGTVLIDTPSPSPSWVT 644
                 7**********988865 PP

  == domain 6  score: -0.7 bits;  conditional E-value: 0.15
                 TTEEEECSSSTT CS
     XPB_DRD   5 rGTllidgdprg 16 
                 +GT+lid++ ++
  EPX72583.1 666 AGTVLIDTPSPT 677
                 7*******9986 PP

  == domain 7  score: 2.1 bits;  conditional E-value: 0.021
                 TTEEEECSSSTT...-C CS
     XPB_DRD   5 rGTllidgdprgkaslp 21 
                 +GT+lid++ ++++++ 
  EPX72583.1 717 AGTVLIDTPSPSPSWVT 733
                 7**********988865 PP

  == domain 8  score: 2.1 bits;  conditional E-value: 0.02
                 TTEEEECSSSTT...-C CS
     XPB_DRD   5 rGTllidgdprgkaslp 21 
                 +GT+lid++ ++++++ 
  EPX72583.1 755 AGTVLIDTPSPSPSWVT 771
                 7**********988865 PP

  == domain 9  score: -4.1 bits;  conditional E-value: 1.7
                 TEEEECSSSTT CS
     XPB_DRD   6 GTllidgdprg 16 
                 GT+l+d + ++
  EPX72583.1 938 GTVLVDVPTPT 948
                 9****988775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1095 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       768  (0.0428356); expected 358.6 (0.02)
Passed bias filter:                      200  (0.0111551); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.33u 0.37s 00:00:01.70 Elapsed: 00:00:00.57
# Mc/sec: 5754.54
//
Query:       EPX72584.1  [L=620]
Description: GTPase activating protein Ucp3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.5e-38  130.3   0.3    6.9e-38  129.3   0.3    1.5  1  ArfGap    Putative GTPase activating protein for Arf


Domain annotation for each model (and alignments):
>> ArfGap  Putative GTPase activating protein for Arf
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.3   0.3   3.8e-42   6.9e-38       4     115 ..      10     123 ..       7     125 .. 0.93

  Alignments for each domain:
  == domain 1  score: 129.3 bits;  conditional E-value: 3.8e-42
                 HHHHCC.SCCCCB-TTT-SBS--EEETTTTEEE-HHHHHHHCCS.TTT--EEETTTS---HHHHHHHHHTCHHHHHHHHTTTC-TTTSG.-TTCGHHHH CS
      ArfGap   4 lkellk.epenkvCaDCgakeptWaslnlgvflCieCsgvHrslgvhiskvrsltldkwedeelellkalgNkkaneileaklpkeekr.skssskekr 100
                 +++l++  p+n++CaDC+++ ++Was+n+g+flC++C+ +Hr+lg+hiskv+s++ld+w+d++++ ++ +gN +an++++ +  +++ + +++s+++ +
  EPX72584.1  10 IRHLIQsVPGNNICADCHTRGVQWASWNIGIFLCLRCATIHRKLGSHISKVKSVSLDQWTDDQVNNMRDWGNLNANRYWNPSPLDHPLPmNAHSDDTVM 108
                 566666589************************************************************************9988888889999***** PP

                 HHHHHHHHTCHTTCC CS
      ArfGap 101 eefirakYeekkfae 115
                 e++ir+kYe+k f e
  EPX72584.1 109 EKYIRDKYEKKLFLE 123
                 ***********9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (620 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       583  (0.0325172); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.76u 0.34s 00:00:01.10 Elapsed: 00:00:00.60
# Mc/sec: 3104.31
//
Query:       EPX72585.1  [L=531]
Description: vacuolar membrane amino acid uptake transporter Fnx1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      2e-39  135.5  51.2      2e-39  135.5  51.2    2.4  2  MFS_1            Major Facilitator Superfamily
    2.3e-12   46.2  16.0    1.8e-11   43.2  12.1    2.5  3  TRI12            Fungal trichothecene efflux pump (TRI12)
    3.4e-12   46.0  15.2    3.4e-12   46.0  15.2    2.8  3  Sugar_tr         Sugar (and other) transporter
  ------ inclusion threshold ------
        1.5    9.2   6.3        3.1    8.2   2.9    2.7  2  Phage_holin_5_1  Bacteriophage A118-like holin, Hol118


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.5  51.2   4.5e-43     2e-39       1     352 [.      37     439 ..      37     440 .. 0.88
   2 ?   -1.5   0.3      0.21   9.3e+02     150     166 ..     498     514 ..     485     526 .. 0.60

  Alignments for each domain:
  == domain 1  score: 135.5 bits;  conditional E-value: 4.5e-43
       MFS_1   1 lllaaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslw.lllvlrvlqGlg 98 
                 l++++flsal+++i+++++p  ++++++     ++ ++t y ++  ++++++Grlsd fGrr  ++++ ++f +g++l+  +ss+   l+++r+++G+g
  EPX72585.1  37 LWIGGFLSALDMTIVASLYP-VIGSEFN-LLNNASYIATSYLITNTAFQPLYGRLSDIFGRRAAIVFANVTFTIGTFLCG-SSSSLaGLCIARAIAGIG 132
                 699*****************.*******.78889*****************************************44444.3666669*********** PP

       MFS_1  99 agalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpeepperkrkspkeee......... 188
                 +g+l +++ ++ +d++p +erg   g+ ++ +++G  lg +lggl+a+ +gWr++fy+  ++++++ +++++ ++ +p+ r  + +   +         
  EPX72585.1 133 GGGLGTMSSIISSDIVPLRERGTWQGFTNVIWGIGGSLGGPLGGLIAQRWGWRVAFYFQIPLGIISTIVVAWRVRINPTVRDSDVSLLSRidylgsfll 231
                 ********************************************************************99999999999999999888889******** PP

       MFS_1 189 ...........................................kgtgpaplvpawkallkdpvlwillialllfffgfsglltllplylqevlglsgll 244
                                                            k ++  p++p   +l+ + +l ++l+ ++ +f + + +l+ lpl++  vl ++   
  EPX72585.1 232 vsgtsllimtfswagdayswlspiiiglfissalllyafywveKNVALEPIAP-VHILKQKTPLSVCLCNFFNAF-CAFVILYELPLFFEAVLFMP-SS 327
                 *********************************99999998877777777777.555555554434777777775.8888****************.79 PP

       MFS_1 245 laglllallalvgailallagrlsdrlgr.rrrlllallllllaalglallavt.ssavllllvlvl..iGfglgfv.fpsllalasdlappeeagtas 338
                 +ag+ +    +++  +++ +g +++++gr r+ +l+++++l ++ +g+ +l  + +  +lll+ l+l   G+ +g+  +++l+a++s+lap + ++ a+
  EPX72585.1 328 EAGARIFPHVIFTSLGSVTGGLYMKKTGRyRPLILFGYFALWTSIVGFSVLTSFgQRIPLLLVTLFLslSGTSYGMNlTATLIAIISSLAP-QDQAVAT 425
                 999999999999999999999999****977777778888888888888877776666666664444558889999977888888888886.9999*** PP

       MFS_1 339 glfntagslggalg 352
                 gl  ++++ g+++g
  EPX72585.1 426 GLSYLFRATGSVIG 439
                 ***********998 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.21
       MFS_1 150 Wravfyilaivsllafv 166
                 ++ +f i+ ++++l++v
  EPX72585.1 498 FTITFAIVSFFAFLGLV 514
                 44444444444444443 PP

>> TRI12  Fungal trichothecene efflux pump (TRI12)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.2  12.1   3.9e-15   1.8e-11      63     314 ..      51     297 ..      36     313 .. 0.81
   2 ?   -2.6   0.2       0.3   1.4e+03     119     400 ..     396     416 ..     368     456 .. 0.52
   3 !    3.9   0.0    0.0033        15     504     542 ..     474     511 ..     463     525 .. 0.88

  Alignments for each domain:
  == domain 1  score: 43.2 bits;  conditional E-value: 3.9e-15
       TRI12  63 sasalpnilqdvgqsensslfstlwttgqavsilvmgrltdrfgrrpfvilthilglvgaivgctatkfntllaamtllgvaagpagasplfv.gelm. 159
                  as  p i  +    +n s ++t + + ++    + grl+d fgrr  ++ + +   +g+ +  +++ +  l  a ++ g+  g  g+   ++  +++ 
  EPX72585.1  51 VASLYPVIGSEFNLLNNASYIATSYLITNTAFQPLYGRLSDIFGRRAAIVFANVTFTIGTFLCGSSSSLAGLCIARAIAGIGGGGLGTMSSIIsSDIVp 149
                 57888888899999999******999999999999***************************99********************999866555156651 PP

       TRI12 160 .snktkflgllivsipvvvtsglspylgqrlaiqgswrwifyiyiitsaiavllivvwyyppsfaqlhgkkvrkreelakldwigiilvivgvslfllg 257
                   ++  + g+  v i  +  s l+  lg  +a +  wr  fy  i +  i  +++v w            + +    l+++d++g +l++ g+sl+++ 
  EPX72585.1 150 lRERGTWQGFTNV-IWGIGGS-LGGPLGGLIAQRWGWRVAFYFQIPLGII-STIVVAWRVRI----NPTVRDSDVSLLSRIDYLGSFLLVSGTSLLIMT 241
                 1456667776655.5666666.7778999999999*******99877655.56778886532....233345666789********************* PP

       TRI12 258 vswggkpnspwnsakviglissglgslvvfalyevygk.pvrpivppalfkdtrgf.vc 314
                  sw g+    w s  +igl+ s   +l+++a+y v  +   +pi p  ++k+   + vc
  EPX72585.1 242 FSWAGDAY-SWLSPIIIGLFISS--ALLLYAFYWVEKNvALEPIAPVHILKQKTPLsVC 297
                 *****976.5*********9986..5899999998754256899999988875443155 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.3
       TRI12 119 lvgaivgctatkfntllaamtllgvaagpagasplfvgelmsnktkflgllivsipvvvtsglspylgqrlaiqgswrwifyiyiitsaiavllivvwy 217
                 l g+  g   t   tl+a +                                                                               
  EPX72585.1 396 LSGTSYGMNLT--ATLIAII------------------------------------------------------------------------------- 413
                 44444433222..2233322............................................................................... PP

       TRI12 218 yppsfaqlhgkkvrkreelakldwigiilvivgvslfllgvswggkpnspwnsakviglissglgslvvfalyevygkpvrpivppalfkdtrgfvcil 316
                                                                                                                    
  EPX72585.1   - ---------------------------------------------------------------------------------------------------   -
                 ................................................................................................... PP

       TRI12 317 lissimgamnlslviiypqqvvnifgsslknweetawmsatasfgtgagvvvlgslfhlvrhirwqilvgalwltaflgamssv 400
                                                                                                  ss+
  EPX72585.1 414 ---------------------------------------------------------------------------------SSL 416
                 .................................................................................222 PP

  == domain 3  score: 3.9 bits;  conditional E-value: 0.0033
       TRI12 504 eavkalpgmtteiaavvsramadsytasyanvyyfamal 542
                 e++  +p + ++i  +v ++  d +t ++a v +fa+ l
  EPX72585.1 474 ESISIIPSLPENIRNLVVQSYVDGFTITFAIVSFFAF-L 511
                 678899*****************************96.3 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.0  15.2   7.5e-16   3.4e-12       7     188 ..      39     202 ..      33     206 .. 0.90
   2 ?   -2.7   6.9      0.45     2e+03     259     382 ..     297     420 ..     283     458 .. 0.55
   3 ?   -1.8   0.1      0.24   1.1e+03     163     192 ..     493     520 ..     481     527 .. 0.69

  Alignments for each domain:
  == domain 1  score: 46.0 bits;  conditional E-value: 7.5e-16
                 HHHHHHHHHHHCGGGTHHHHHHHHTSTT--SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGG CS
    Sugar_tr   7 lggllfgYdtgvigafltllkfaknfglsksksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevl 105
                 +gg+l   d+ ++++ + +++  ++f+l ++ s           i+ ++l+  ++ + + g l+d+fGR+ ++++a+v f ig++l++ +    s+  l
  EPX72585.1  39 IGGFLSALDMTIVASLYPVIG--SEFNLLNNAS----------YIATSYLITNTAFQPLYGRLSDIFGRRAAIVFANVTFTIGTFLCGSSS---SLAGL 122
                 688888888888888888888..8888888876..........577899999999999*********************************...9**** PP

                 GGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHHHHHHHHHHG CS
    Sugar_tr 106 ivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglglnktsnadgwrillglqlvpallllill 188
                 +++R ++Gig G+  +++++  s i p + Rg+  +++++ + +G  ++  +g  ++   +++gwr+ +++q+ + ++  i++
  EPX72585.1 123 CIARAIAGIGGGGLGTMSSIISSDIVPLRERGTWQGFTNVIWGIGGSLGGPLGGLIA---QRWGWRVAFYFQIPLGIISTIVV 202
                 *********************************************999988876654...4588************8877765 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.45
                 HHHHHHHHHTTHHHHHHHTTTHHHHSS-THH...HHHHHHHHHHHHHHHHHHHHHHHHS-S.HHHHHHHHHHHHHHHHHHH..HHHHTTSS...CHHHH CS
    Sugar_tr 259 vvlqifqqltGinaimyysptifenlglsks...llvtiivgvvnfvatfvaiflvdrfGR.RtllllGaagmaicfvilgivalllvakskaasivai 353
                 +++++f  ++  ++i+y  p +fe + + +s    +  +  ++ + + ++ + + ++++GR R+l l+G +      v ++  + +++        +++
  EPX72585.1 297 CLCNFFNAFCA-FVILYELPLFFEAVLFMPSseaGARIFPHVIFTSLGSVTGGLYMKKTGRyRPLILFGYFALWTSIVGFSVLTSFGQRIP---LLLVT 391
                 55566666665.6666666666666666666332222222233333334444466777777667777776666655555554444444443...44445 PP

                 HHHHHHHHHHHTTTTHHHHHHHHHHSHTT CS
    Sugar_tr 354 vfialfialfalgwgpvpwvlvsElfpqs 382
                  f+ l    +++ ++ ++  ++s l+pq+
  EPX72585.1 392 LFLSLSGTSYGMNLTATLIAIISSLAPQD 420
                 55555555566666666655555555554 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 0.24
                 TSS-TTHHHHHHHCCHHHHHHHHHHGGGS- CS
    Sugar_tr 163 ktsnadgwrillglqlvpallllilllflP 192
                  + +  g+ i++++ +++a l l++ + ++
  EPX72585.1 493 SYVD--GFTITFAIVSFFAFLGLVFSFKIR 520
                 3444..788888888888888777777665 PP

>> Phage_holin_5_1  Bacteriophage A118-like holin, Hol118
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.1      0.15   6.5e+02      28      54 ..      24      50 ..      20      58 .. 0.85
   2 ?    8.2   2.9   0.00069       3.1      41      77 ..      99     136 ..      93     142 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.15
  Phage_holin_5_1 28 telvpskwlptvsilvgailgalatsl 54
                     +e +p kw    ++ +g  l al  ++
       EPX72585.1 24 AEKLPNKWTILPALWIGGFLSALDMTI 50
                     6889****999999******9997655 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.00069
  Phage_holin_5_1  41 ilvgailgalatsldgs.gslatmiwagalagaggtgl 77 
                      i+   +  ++ t+l gs  sla +  a a+ag gg gl
       EPX72585.1  99 IVFANVTFTIGTFLCGSsSSLAGLCIARAIAGIGGGGL 136
                      566667778999**997257***************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (531 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       720  (0.0401584); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.76u 0.33s 00:00:01.09 Elapsed: 00:00:00.57
# Mc/sec: 2823.75
//
Query:       EPX72586.1  [L=302]
Description: glyoxalase I [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.7e-42  142.9   0.5    2.1e-21   76.5   0.0    2.3  2  Glyoxalase    Glyoxalase/Bleomycin resistance protein/Dioxyge
    8.5e-20   71.1   0.2      1e-07   32.2   0.0    3.8  3  Glyoxalase_4  Glyoxalase/Bleomycin resistance protein/Dioxyge
    1.5e-06   28.4   0.0      0.021   14.9   0.0    4.0  3  Glyoxalase_3  Glyoxalase-like domain
    1.7e-06   27.9   1.7      0.017   15.0   0.3    4.0  2  Glyoxalase_2  Glyoxalase-like domain
     0.0015   17.8   0.0        0.4    9.8   0.0    3.5  3  DUF1338       Domain of unknown function (DUF1338)
  ------ inclusion threshold ------
      0.013   15.6   0.0        2.3    8.3   0.0    2.4  2  CppA_N        CppA N-terminal
      0.016   15.9   0.0         16    6.3   0.0    3.0  3  Glyoxalase_6  Glyoxalase-like domain
       0.12   12.3   0.0        5.4    7.0   0.0    2.4  2  MoaF          MoaF N-terminal domain


Domain annotation for each model (and alignments):
>> Glyoxalase  Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.5   0.0   9.2e-25   2.1e-21       1     128 []      11     150 ..      11     150 .. 0.77
   2 !   64.8   0.1   3.7e-21   8.3e-18       2     128 .]     167     298 ..     166     298 .. 0.85

  Alignments for each domain:
  == domain 1  score: 76.5 bits;  conditional E-value: 9.2e-25
                 EEEEEEEEESHHHHHHHHHHHHHTSEEEEEEEEEESTEEEEEEEEETTTSEEEEEEEECCTTSCTHHCC.......................BSC.... CS
  Glyoxalase   1 gidhvallvgdleksldFYtkvLGfklvkktdnteeteglriaffhaggghielvlneapsgaakhvkk.......................iee.... 72 
                 +++h++++v+dleksl+FYt+v+G+kl++++++             +++ +++++ +  +s   ++v+                        + +    
  EPX72586.1  11 KLNHTMIRVKDLEKSLKFYTEVFGMKLIDQWVF------------EENQFSLSFLAFDGASALHHGVERskregilelthnfgtekeegpiyV-Ngnnd 96 
                 689*****************************5............444444444444444444444433444444444444666555555551.14466 PP

                 TSEEEEEEEEEHCHHHHHHHHHHHTTGEEEEEEECHHCTEEEEEEEEETTSEEEEE CS
  Glyoxalase  73 tvhhvafialdvedvgkaldrlkeagvkvvaepgrhyfgalysfyfrDpdGillei 128
                  ++++++i+++v++++ a+ +l++++v + +++ + +++++ +  + Dpd +++e+
  EPX72586.1  97 PHRGFGHICFSVDNIESACAYLESKDVAFKKKLSDGKMKNIAF--ALDPDNYWIEL 150
                 889***************************************6..9********96 PP

  == domain 2  score: 64.8 bits;  conditional E-value: 3.7e-21
                 EEEEEEEESHHHHHHHHHHHHHTSEEEEEEEE......EEST..EEEEEEEEETTTSEEEEEEEECCTTSCTHHCCBSC....TSEEEEEEEEEHCHHH CS
  Glyoxalase   2 idhvallvgdleksldFYtkvLGfklvkktdn......teet..eglriaffhaggghielvlneapsgaakhvkkiee....tvhhvafialdvedvg 88 
                 ++h++++v+d+++sl+FY+k LG+kl++k+d          +    +     h+ +g +el++n+ +++ +  v++  +    +  + ++i+ +v+++ 
  EPX72586.1 167 FNHTMVRVKDPQASLAFYEK-LGMKLIDKSDHpngqftL--YflAYPSDQTRHNREGILELTHNWGTEKQEGAVYH--NgndgETKGYGHICISVDNIQ 260
                 79******************.**********76555430..23434444556788899999999999999999955..23467899************* PP

                 HHHHHHHHTTGEEEEEEECHHCTEEEEEEEEETTSEEEEE CS
  Glyoxalase  89 kaldrlkeagvkvvaepgrhyfgalysfyfrDpdGillei 128
                 +a+ +++++g+++ +++++  ++++ +    Dpd +++e+
  EPX72586.1 261 AACTQFEQKGLPFKKKLTDGRMKDIAF--LLDPDNYWVEV 298
                 **************************6..9********96 PP

>> Glyoxalase_4  Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.5   0.0   1.6e-10   3.5e-07       2      93 ..      14     125 ..      13     134 .. 0.74
   2 !   32.2   0.0   4.6e-11     1e-07       2     102 ..     103     200 ..     103     206 .. 0.89
   3 !   11.9   0.0   9.1e-05       0.2      65     101 ..     245     280 ..     215     288 .. 0.77

  Alignments for each domain:
  == domain 1  score: 30.5 bits;  conditional E-value: 1.6e-10
                   EEEEE-S-HHHHHHHHHH.TT-EESS--E.EETTTTEEEEEEEETT...EEEEEEEESSTT.......-THHH................TS-EEEEE CS
  Glyoxalase_4   2 QigivVeDleaavarfsallGvgpwqryrdepqevdlafallgsgs...vqieLieplegp.......eflae................hgeglhhl 72 
                   ++ i V+Dle+ ++++++++G++ ++++ +e+ +++l+f+   ++s     +e    ++ +                             + g+ h+
    EPX72586.1  14 HTMIRVKDLEKSLKFYTEVFGMKLIDQWVFEENQFSLSFLAFDGASalhHGVE---RSKREgilelthN---FgtekeegpiyvngnndPHRGFGHI 104
                   89999****************************99999966655543332222...2222233433331...0333445555667888899****** PP

                   EEEES-HHHHHHHHCTTTEEE CS
  Glyoxalase_4  73 aywvddldaavarleeqGfev 93 
                   ++ vd+++ a+a le++++++
    EPX72586.1 105 CFSVDNIESACAYLESKDVAF 125
                   ****************99885 PP

  == domain 2  score: 32.2 bits;  conditional E-value: 4.6e-11
                   EEEEE-S-HHHHHHHHHH.TT-EESS--E.EETTTTEEEEEEEETTEEEEEEEESSTT-THHHTS-EEEEEEEEES-HHHHHHHHCTTTEEEEEEEE CS
  Glyoxalase_4   2 QigivVeDleaavarfsallGvgpwqryrdepqevdlafallgsgsvqieLieplegpeflaehgeglhhlaywvddldaavarleeqGfevvqkgv 98 
                   +i++ V+++e a a+++   +v + ++ +d + + ++afal  + +  ieLi+++e+++  +     ++h  ++v+d +a++a +e+ G+++++k +
    EPX72586.1 103 HICFSVDNIESACAYLES-KDVAFKKKLSDGKMK-NIAFALDPD-NYWIELISQDEKQSAAHTENFRFNHTMVRVKDPQASLAFYEKLGMKLIDKSD 196
                   9****************7.899888888765443.589999999.599***********************************************99 PP

                   -GGG CS
  Glyoxalase_4  99 raga 102
                   ++ +
    EPX72586.1 197 HPNG 200
                   9853 PP

  == domain 3  score: 11.9 bits;  conditional E-value: 9.1e-05
                   TS-EEEEEEEEES-HHHHHHHHCTTTEEEEEEEE-GG CS
  Glyoxalase_4  65 hgeglhhlaywvddldaavarleeqGfevvqkgvrag 101
                      g  h+++ vd+++aa+ ++e++G+++   +  +g
    EPX72586.1 245 ETKGYGHICISVDNIQAACTQFEQKGLPFKK-KLTDG 280
                   556888*********************9644.44555 PP

>> Glyoxalase_3  Glyoxalase-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.12   2.7e+02       1      28 [.      12      39 ..      12      58 .. 0.89
   2 ?    5.0   0.0      0.01        23       3      64 ..     103     163 ..     101     168 .. 0.78
   3 !   14.9   0.0   9.4e-06     0.021       1     112 [.     167     281 ..     167     292 .. 0.66

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.12
  Glyoxalase_3  1 lDHvvlavpdleeaaarfarrlGftvtp 28
                  l H+++ v+dle+  + +++  G+++++
    EPX72586.1 12 LNHTMIRVKDLEKSLKFYTEVFGMKLID 39
                  68****************9999999875 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.01
  Glyoxalase_3   3 HvvlavpdleeaaarfarrlGftvtpggehpglgtaNalvmf.gdg.YlEllavdpeapaperp 64 
                   H+ + v+++e a a+++ +    v+ + + +++  +N  + + +d+  +El++ d+++ a++ +
    EPX72586.1 103 HICFSVDNIESACAYLESK---DVAFKKKLSDGKMKNIAFALdPDNyWIELISQDEKQSAAHTE 163
                   9999999999999999544...55566677777799******777878*****98888877665 PP

  == domain 3  score: 14.9 bits;  conditional E-value: 9.4e-06
  Glyoxalase_3   1 lDHvvlavpdleeaaarfarrlGftvtpggehpglgtaNalvmfgd........gYlElla.vdpeapaperprlfgldrlakgeglhtlalrtddi 88 
                   + H+++ v+d+++  a + ++lG+++++++ hp +    + +  +         g lEl   +   ++++  ++    +   +++g  ++++++d+i
    EPX72586.1 167 FNHTMVRVKDPQASLAFY-EKLGMKLIDKSDHPNGQFTLYFLAYPSdqtrhnreGILELTHnWG-TEKQE--GAVYHNGNDGETKGYGHICISVDNI 259
                   67***********99977.**************9432222222211355555545777776333.33332..2222222323579999999999999 PP

  Glyoxalase_3  89 dataarlraaGvdeagrrvrpdgg 112
                   +a+  +++++G+    + + +dg+
    EPX72586.1 260 QAACTQFEQKGLP--FKKKLTDGR 281
                   9999999999975..554555552 PP

>> Glyoxalase_2  Glyoxalase-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.3   7.6e-06     0.017       3     112 ..      14     149 ..      12     154 .. 0.51
   2 !    5.8   0.1    0.0058        13      65     115 ..     252     300 ..     167     301 .. 0.61

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 7.6e-06
                   ----EES-HHHHHHHHHHTT---EEEE-S........SEEEETTS-EE........EEHHHHHH.....----.---S--SS......-EEEEEES- CS
  Glyoxalase_2   3 lillvvkdieeskkFYedvlelkikldfG........envsfetgfal........kedlkeli.....nlde.siaeqsnn......feLyFeved 71 
                    +++ vkd+e+s kFY +v+ +k++ ++         +++ f++  al        +e++ el+     + +e  i+ + nn       ++ F v++
    EPX72586.1  14 HTMIRVKDLEKSLKFYTEVFGMKLIDQWVfeenqfslSFLAFDGASALhhgverskREGILELThnfgtEKEEgPIYVNGNNdphrgfGHICFSVDN 110
                   67899****************9987653211111112344555555555555544434444444443221111233333332111111245566666 PP

                   HHHHHHHH..GGGS-EEEEEEE-TTS-EEEEEE-TT--EEE CS
  Glyoxalase_2  72 vdaflqklkeaeniellhelkekpWgqrvirfyDpDkhiiE 112
                   ++++   l e +++ + ++l   + +  ++   DpD+  iE
    EPX72586.1 111 IESACAYL-ESKDVAFKKKLSDGKMK-NIAFALDPDNYWIE 149
                   66666666.33446666555555543.35555566666666 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0058
                   EEEEES-HHHHHHHH..GGGS-EEEEEEE-TTS-EEEEEE-TT--EEEEEE CS
  Glyoxalase_2  65 LyFevedvdaflqklkeaeniellhelkekpWgqrvirfyDpDkhiiEige 115
                   +   v++++a+  +++ ++ + + ++l+     + ++ + DpD+  +E+ e
    EPX72586.1 252 ICISVDNIQAACTQFE-QKGLPFKKKLTDGRM-KDIAFLLDPDNYWVEVIE 300
                   4567889999999994.445777777766665.468888899999999866 PP

>> DUF1338  Domain of unknown function (DUF1338)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0   0.00018       0.4     198     234 ..       2      39 ..       1     142 [. 0.81
   2 ?    2.0   0.0     0.043        96     205     237 ..     164     196 ..     148     225 .. 0.86
   3 ?    1.0   0.0     0.087     2e+02     210     239 ..     251     280 ..     246     289 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00018
     DUF1338 198 aAwvlvngyaiNHlTprvldidalqaflee.rgiklkd 234
                 aA +  n+y +NH+ +rv+d+++  +f +e  g+kl d
  EPX72586.1   2 AATTNANTYKLNHTMIRVKDLEKSLKFYTEvFGMKLID 39 
                 566669*****************999999888888843 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.043
     DUF1338 205 gyaiNHlTprvldidalqafleergiklkdeie 237
                    +NH+  rv+d +a  af e+ g+kl d+++
  EPX72586.1 164 NFRFNHTMVRVKDPQASLAFYEKLGMKLIDKSD 196
                 5679************************98876 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.087
     DUF1338 210 HlTprvldidalqafleergiklkdeieGp 239
                 H+ ++v +i+a+ ++ e++g++ k++   +
  EPX72586.1 251 HICISVDNIQAACTQFEQKGLPFKKKLTDG 280
                 99*********************9987655 PP

>> CppA_N  CppA N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.0     0.001       2.3       3      28 ..      14      39 ..      12      62 .. 0.78
   2 ?    4.8   0.0     0.012        27       1      29 [.     167     194 ..     167     205 .. 0.89

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.001
      CppA_N  3 tpvlrvnnrdlniafyqetlGlklls 28
                + ++rv + ++  +fy e +G+kl+ 
  EPX72586.1 14 HTMIRVKDLEKSLKFYTEVFGMKLID 39
                6689*******************974 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.012
      CppA_N   1 fktpvlrvnnrdlniafyqetlGlkllse 29 
                 f++ ++rv + +   afy e+lG+kl+ +
  EPX72586.1 167 FNHTMVRVKDPQASLAFY-EKLGMKLIDK 194
                 678899************.68****9965 PP

>> Glyoxalase_6  Glyoxalase-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0    0.0072        16       3      74 ..      16     116 ..      14     121 .. 0.58
   2 ?    5.7   0.0     0.011        25      54      93 ..     155     201 ..     124     214 .. 0.71
   3 ?    4.5   0.0     0.026        59       3      91 ..     171     199 ..     169     293 .. 0.50

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0072
  Glyoxalase_6   3 vldaadpaalaaFwaaalgweveree......................aaledpegvgpaaedaatllfqrvpe....................... 54 
                   ++ ++d ++  +F+ +++g+++ ++                                              v++                       
    EPX72586.1  16 MIRVKDLEKSLKFYTEVFGMKLIDQWvfeenqfslsflafdgasalhhG----------------------VERskregilelthnfgtekeegpiy 90 
                   6788999*************99998855555555555444444433320......................22222233333333333333355666 PP

  Glyoxalase_6  55 ......paknrvHldlavedldaeva 74 
                         p++   H+ ++v++++ ++a
    EPX72586.1  91 vngnndPHRGFGHICFSVDNIESACA 116
                   65555555556777777777776665 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.011
  Glyoxalase_6  54 e.....pakn.r.vHldlavedldaevarlvalGArvlreprdgthg 93 
                   e     + +n r  H+ ++v+d++a  a  ++lG + ++++++++++
    EPX72586.1 155 EkqsaaHTENfRfNHTMVRVKDPQASLAFYEKLGMKLIDKSDHPNGQ 201
                   24566655555446999999999999999999999999988887654 PP

  == domain 3  score: 4.5 bits;  conditional E-value: 0.026
  Glyoxalase_6   3 vldaadpaalaaFwaaalgwevereeaaledpegvgpaaedaatllfqrvpepaknrvHldlavedldaevarlvalGArvlreprdgt 91 
                   ++ ++dp+a  aF++++                                                            G + ++++++++
    EPX72586.1 171 MVRVKDPQASLAFYEKL------------------------------------------------------------GMKLIDKSDHPN 199
                   45566777777777665............................................................333333322222 PP

>> MoaF  MoaF N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.0    0.0024       5.4      39      86 ..     113     158 ..     105     166 .. 0.82
   2 ?    2.8   0.0     0.049   1.1e+02      43      81 ..     265     301 ..     251     302 .] 0.76

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0024
                 EE...EETTEEEEEETTTTEEEEEE-EEEECCTTEEEEEEEETTSTTE CS
        MoaF  39 ieheffdadtlrWteeekeesgeaeyeatevregiYfvdflkkereae 86 
                  ++  ++++ +++++  k + g+ +  a+ ++++ Y+++++++++++ 
  EPX72586.1 113 SACAYLESKDVAFKK--KLSDGKMKNIAFALDPDNYWIELISQDEKQS 158
                 556666777777777..8899999*******************99864 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.049
                 .EETTEEEEEETTTTEEEEEE-EEEECCTTEEEEEEEET CS
        MoaF  43 ffdadtlrWteeekeesgeaeyeatevregiYfvdflkk 81 
                  f+++ l +++  k + g+ +  a+ ++++ Y+v+++++
  EPX72586.1 265 QFEQKGLPFKK--KLTDGRMKDIAFLLDPDNYWVEVIEQ 301
                 45566666666..7888999999************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       504  (0.0281109); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2173.77
//
Query:       EPX72587.1  [L=696]
Description: glutamine-fructose-6-phosphate transaminase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-61  206.4   0.0    2.4e-34  118.0   0.0    2.2  2  SIS       SIS domain
      4e-14   53.0   0.0      8e-14   52.0   0.0    1.4  1  GATase_6  Glutamine amidotransferase domain
    1.2e-09   38.1   0.0    3.2e-09   36.8   0.0    1.7  1  GATase_7  Glutamine amidotransferase domain
    0.00012   21.0   0.1    0.00022   20.2   0.1    1.3  1  GATase_4  Glutamine amidotransferases class-II


Domain annotation for each model (and alignments):
>> SIS  SIS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.0   0.0   5.4e-38   2.4e-34       2     129 ..     379     505 ..     378     507 .. 0.98
   2 !   86.4   0.0   3.2e-28   1.4e-24       2     130 ..     551     678 ..     550     679 .. 0.91

  Alignments for each domain:
  == domain 1  score: 118.0 bits;  conditional E-value: 5.4e-38
                 HCTSSEEEEEESHHHHHHHHHHHHHHHHHHTSEEEEEEHHHHHHTGGGG-STTCEEEEEESSSHHHHHHHHHHHHHHTTSEEEEEESSTTSHHHHHSSE CS
         SIS   2 LakakriyvlGaGtsyaiakelalkleeiggivvevedaselkhgvlalideddlvilisfsgetkdlvaaaelakergakiiaITdskgsplareadl 100
                 +++++r++++++Gtsy+++  +++ +ee++gi+v++e+as+++++ +++i +dd v+++s+sget+d+++a++ + erga +i++ +  gs+++r++++
  EPX72587.1 379 IRQSRRLVFIACGTSYHSCIAVRPIFEELTGIPVVIELASDFMDR-CPNIFRDDTVVFVSQSGETADSLLALNFCLERGALTIGVVNCVGSSISRKTHC 476
                 899******************************************.***************************************************** PP

                 EEEEEEECHCSSSHCHHHHHHHHHHHHHH CS
         SIS 101 alyinaepetlvastksltaqlaaldala 129
                  ++ina+pe++vastk++t+q++al ++a
  EPX72587.1 477 GVHINAGPEICVASTKAYTSQYIALALMA 505
                 ************************98876 PP

  == domain 2  score: 86.4 bits;  conditional E-value: 3.2e-28
                 HCTSSEEEEEESHHHHHHHHHHHHHHHHHHTSEEEEEEHHHHHHTGGGG-STTCEEEEEESSSHHHHHHHHHH.HHHHTTSEEEEEESSTTSHHHHHSS CS
         SIS   2 LakakriyvlGaGtsyaiakelalkleeiggivvevedaselkhgvlalideddlvilisfsgetkdlvaaae.lakergakiiaITdskgsplaread 99 
                 L ++++++++G+G++ya+a+e+alk++ei++ ++e+ +a+elkhgvlal++e+ ++i++ + + +++++ +a  + ++rg+k+i+IT +++      + 
  EPX72587.1 551 LLEKDNMLIIGRGYQYATAMEGALKVKEISYTHAEGILAGELKHGVLALVEEGLPIIMLVPDDFQHPKAVNALeQIRARGGKPIVITTKDSEMFKGLS- 648
                 678899*********************************************************99988877777*************88888888888. PP

                 EEEEEEEECHCSSSHCHHHHHHHHHHHHHHH CS
         SIS 100 lalyinaepetlvastksltaqlaaldalav 130
                  ++++++    l++++++++ ql++++++++
  EPX72587.1 649 -TFIVPKTVDCLQGILNVIPFQLLSYWMAVL 678
                 .5555555555*****************997 PP

>> GATase_6  Glutamine amidotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.0   0.0   1.8e-17     8e-14      12     125 ..      79     202 ..      59     209 .. 0.81

  Alignments for each domain:
  == domain 1  score: 52.0 bits;  conditional E-value: 1.8e-17
    GATase_6  12 devalaHvRlaivglaeeegaqPf.psedgrlllvhNGeiynykelreelpalkglafrsrsDtevllall............eelGeevlerlrGmfa 97 
                 +++a+ H+R+a++g +    ++P  +   +++++vhNG   ny+el+  l++ +g +f+s++Dte +++l+            ++l++ v+++l+G++a
  EPX72587.1  79 NHCAISHTRWATHGQPSPINCHPQrSDVHSEFIVVHNGILTNYRELKTVLES-RGMTFESETDTECVAKLAkfiydttpgidfTSLAKLVFRELEGAYA 176
                 35**************88888***8888999*********************.****************9999997555544444445555******** PP

    GATase_6  98 faiwdk.rentlilardrlgvkplyyavd 125
                   i ++  +++++ +  r g +pl+++v+
  EPX72587.1 177 LLIKSShYPGEIVAT--RRG-SPLIVGVK 202
                 *99888555555544..556.78888776 PP

>> GATase_7  Glutamine amidotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.8   0.0   7.1e-13   3.2e-09      19      86 ..     105     183 ..      85     207 .. 0.83

  Alignments for each domain:
  == domain 1  score: 36.8 bits;  conditional E-value: 7.1e-13
    GATase_7  19 sedgrlvivfnGeiyNykelreeLeakghrfrtksDtevllallea...........ewgeealerlnGmfAfaiwdee 86 
                 +   ++++v+nG ++Ny+el+  Le++g++f++++Dte +++l +               + ++++l+G +A++i  ++
  EPX72587.1 105 DVHSEFIVVHNGILTNYRELKTVLESRGMTFESETDTECVAKLAKFiydttpgidftSLAKLVFRELEGAYALLIKSSH 183
                 456789**********************************999877999*****9977777888*********997755 PP

>> GATase_4  Glutamine amidotransferases class-II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.1   4.9e-08   0.00022      64     118 ..      72     125 ..      47     148 .. 0.81

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 4.9e-08
    GATase_4  64 vreypiksknvvaHiRkatqGevklenthpFvRelwgrewifAHnGdlkeykpkl 118
                  ++ ++  + +++H R at+G+ +  n+hp +R+    e+i  HnG l++y++  
  EPX72587.1  72 NKDTKFINHCAISHTRWATHGQPSPINCHP-QRSDVHSEFIVVHNGILTNYRELK 125
                 56666778899*******************.7999999**********9998755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (696 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       342  (0.0190752); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.59u 0.29s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 4731.14
//
Query:       EPX72588.1  [L=1517]
Description: Clr6 histone deacetylase complex subunit Pst1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.9e-77  258.8   2.3    7.2e-76  255.6   0.0    3.4  3  Sin3a_C         C-terminal domain of Sin3a protein
    4.2e-40  135.6  11.9    7.8e-17   61.1   0.0    4.1  3  PAH             Paired amphipathic helix repeat
    1.9e-35  120.8   0.0    6.9e-35  119.0   0.0    2.0  1  Sin3_corepress  Sin3 family co-repressor


Domain annotation for each model (and alignments):
>> Sin3a_C  C-terminal domain of Sin3a protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.2      0.59   3.5e+03      44      98 ..     511     566 ..     479     570 .. 0.61
   2 !  255.6   0.0   1.2e-79   7.2e-76       1     286 []    1011    1289 ..    1011    1289 .. 0.94
   3 ?   -2.9   3.8      0.76   4.5e+03     184     252 ..    1415    1482 ..    1323    1503 .. 0.68

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.59
     Sin3a_C  44 avelgldkkesealalrl.eseeeeeeyYsqllelveklldGeidqsqfEdslRem 98 
                  v +  +k+  e  +l+  ++   +e+ Y+++++l+e + +   d+++  + + ++
  EPX72588.1 511 NVPIAQNKNLTELAFLDAvRQYLVNESKYNEFIKLLELYSQEVFDKNALVERCQKF 566
                 22222233333444444445677888889999999988888888888888888776 PP

  == domain 2  score: 255.6 bits;  conditional E-value: 1.2e-79
     Sin3a_C    1 FfaNttfYvflrlfqiLyeRLlkikqaeeqvaeevkerkankvavelgldkkesealalrleseeeeeeyYsqllelveklldGeidqsqfEdslRe 97  
                  +f+N  +Y+f+rlf+iLy+RL+++k +ee++ ++++  k+n+va++lgl+++ se+l+  l    +++++Y q lel+e++++Geidq+ fEd lR 
  EPX72588.1 1011 LFGNMGLYCFFRLFHILYTRLEHLKGLEEKAYQKQHGIKPNPVALDLGLIRDPSERLGFTL---PSSDTVYGQALELCERIIEGEIDQNGFEDALRC 1104
                  69***********************************************************...99******************************* PP

     Sin3a_C   98 mfgikaYklfTldKliqalvkqlqtivsDekcqellelfekerskeettsqdeisyrkkaekll.kdenlfriewkseskkltiqlldkddetlddd 193 
                  ++gi+++ ++T++K+i +l+kql+ti+ + + ++l+  fe++r +++t+ +++i yr ++e +l +de+l  i+w+se+++ +i+l++++d t+++ 
  EPX72588.1 1105 LYGIHGFRMYTVEKIIGSLMKQLHTITGNRRIAQLFMFFERDRVQRKTSPRQQIMYRVQTETVLgPDEDLCCIDWNSETQQSAIRLMGREDLTMANL 1201
                  ************************************************************************************************9 PP

     Sin3a_C  194 eveaeerwkeYvesYvlveptegvereklkkvfLkRnlkaerkeeekkeeeeqekaekeeeaekeleveekleiriclnsyklvyvpgtedvl 286 
                  + ++ e+w +Y+ sY++++pteg+  e+++ +fL Rnl+  + +ee++++   ++a    +a  +   +++l + i +n+ k+vy+p tedv+
  EPX72588.1 1202 K-TDAEKWCYYIGSYIMSSPTEGILPEQVRVPFLHRNLPIDDVNEEDENNYVVRNA----HAILTNFLRSGLALTIPINTVKIVYEPSTEDVF 1289
                  9.99********************99************666666555555544333....234444446**********************97 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 0.76
     Sin3a_C  184 dkddetldddeveaeerwkeYvesYvlveptegvereklkkvfLkRnlkaerkeeekkeeeeqekaeke 252 
                  ++dd++++d++ ++ ++  +  ++Y   +++e  ++ ++k   Lk n+k+ r+++   +++e+++a++ 
  EPX72588.1 1415 GEDDANTQDEDEAEFSKGHQRGKKYD-GDNNETPDKMTKKTRTLKENVKNDRENQTTSKQSESTSAASF 1482
                  45555554444122222233333444.234444445556666899999777777666665544433332 PP

>> PAH  Paired amphipathic helix repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.1   0.0   1.3e-20   7.8e-17       1      45 []     211     255 ..     211     255 .. 0.99
   2 !   52.8   2.3   5.1e-18   3.1e-14       1      45 []     377     421 ..     377     421 .. 0.98
   3 !   25.3   1.2   2.1e-09   1.2e-05       2      41 ..     538     577 ..     537     580 .. 0.95

  Alignments for each domain:
  == domain 1  score: 61.1 bits;  conditional E-value: 1.3e-20
         PAH   1 evYkeFLdiLhdyqkeqidskeVyeqVskLFhdhpdLlreFnqFL 45 
                 evY+eFLdi+++++++ i ++eV+++Vs LF+++p L+++Fn+FL
  EPX72588.1 211 EVYNEFLDIMKEFKSQAIETPEVITRVSALFSGYPALIQGFNTFL 255
                 8*******************************************8 PP

  == domain 2  score: 52.8 bits;  conditional E-value: 5.1e-18
         PAH   1 evYkeFLdiLhdyqkeqidskeVyeqVskLFhdhpdLlreFnqFL 45 
                 e Y++FLdiL++yq +q+ ++ Vy qVs+LF+  pdLl+eF++FL
  EPX72588.1 377 EAYNAFLDILKSYQHDQRPIQLVYYQVSQLFAEAPDLLEEFKRFL 421
                 67******************************************8 PP

  == domain 3  score: 25.3 bits;  conditional E-value: 2.1e-09
         PAH   2 vYkeFLdiLhdyqkeqidskeVyeqVskLFhdhpdLlreF 41 
                 +Y+eF+++L  y++e  d++ ++e+++k++h +++Ll + 
  EPX72588.1 538 KYNEFIKLLELYSQEVFDKNALVERCQKFLHESEHLLNWL 577
                 8************************************996 PP

>> Sin3_corepress  Sin3 family co-repressor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.0   0.0   1.2e-38   6.9e-35       1      98 []     602     698 ..     602     698 .. 0.98

  Alignments for each domain:
  == domain 1  score: 119.0 bits;  conditional E-value: 1.2e-38
  Sin3_corepress   1 krlgpsYrlLpksyqqpkcsgrdelekevLNdewvsvptwasedsgsfkasrknqyeealfrcEderyelDmvieanrstiklleelakkiesms 95 
                     k++gpsYrlLpk +  ++csgrd+ ++ +LNd wvs+pt asedsg f+a+rknq+ee+l+r+E+ery +D +i an ++i+lle   +k+++++
      EPX72588.1 602 KSYGPSYRLLPKIELLLPCSGRDDACWTILNDAWVSHPTLASEDSG-FIAHRKNQFEESLHRLEEERYKYDRHIGANVRAIELLEMNFRKMQKLT 695
                     679******************************************8.**********************************************99 PP

  Sin3_corepress  96 eee 98 
                     e+e
      EPX72588.1 696 EDE 698
                     886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1517 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1434  (0.0799822); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.97u 0.30s 00:00:01.27 Elapsed: 00:00:00.47
# Mc/sec: 9769.06
//
Query:       EPX72589.1  [L=321]
Description: hemolysin-III family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-67  227.8  24.9    1.6e-67  227.5  24.9    1.1  1  HlyIII    Haemolysin-III related
  ------ inclusion threshold ------
        2.5    8.6  15.7       0.54   10.7   2.2    3.0  2  MerC      MerC mercury resistance protein


Domain annotation for each model (and alignments):
>> HlyIII  Haemolysin-III related
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  227.5  24.9   1.8e-71   1.6e-67       3     224 .]      85     305 ..      83     305 .. 0.97

  Alignments for each domain:
  == domain 1  score: 227.5 bits;  conditional E-value: 1.8e-71
      HlyIII   3 lhnEtlniwtHllgailfivlailllslaevkensklakvvvlvfllgallcllcSalyHtlsihseeklrkffaklDysgIslliagsylplilyala 101
                 lhnE++niw+Hl+g+i+f++++i    ++  + ++++++ v++vfl++al++l+cS++yHt+s hs+  ++k  +klDy+gI+++i+gs++p++ y +a
  EPX72589.1  85 LHNESINIWSHLFGVIIFLFFIIRSERILVRETTTSQDVYVFMVFLISALTMLFCSTFYHTISNHSS-HVSKYGNKLDYLGIVIMIVGSFVPCLHYGFA 182
                 8*****************999999888888887799*******************************.9****************************** PP

      HlyIII 102 kapkagllylslilalgvlgiisklvplfsrpearplravlfillgllgvipllhlllvltqlgeaa.elalvllvlggvlylvGavfYalrvPErlkp 199
                 ++ ++++ly+ +i  +gv+  +++++++f++pe+r +ra+lf+++gl+g++p+lh +l++++++    ++ l +l+l+gv+y+vGa++Ya r+PE++ p
  EPX72589.1 183 CHANFRTLYTGTIFSIGVIVAFTCMLDRFRQPEWRSFRAILFVIMGLFGIFPVLH-ALFIYTIKDLLvRMGLGWLFLQGVFYIVGATIYANRIPEKWYP 280
                 *******************************************************.888888888889******************************* PP

      HlyIII 200 gkfdivghsHqiFHvfvvlgalfhy 224
                 gk+d++g+sHq+FHv+vv++al+h+
  EPX72589.1 281 GKYDVFGSSHQWFHVCVVIAALCHF 305
                 ************************6 PP

>> MerC  MerC mercury resistance protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   2.2     6e-05      0.54      31     113 ..      89     173 ..      75     176 .. 0.76
   2 ?    2.1   5.8     0.029   2.6e+02      56     113 ..     214     269 ..     174     304 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 6e-05
        MerC  31 sf.lasellhqvllilvvaigllalvvgyrrhrktsvlvlgal.GllillvalflgteaeetllfgslwqvltvlGaalLaiahv 113
                 s+ + s+l+ +++++++++ +   lv+ +++ ++ +v++++++ +l++l+ ++f++t   ++ +++++ + l +lG+++++++++
  EPX72589.1  89 SInIWSHLFGVIIFLFFIIRSERILVRETTTSQDVYVFMVFLIsALTMLFCSTFYHTISNHSSHVSKYGNKLDYLGIVIMIVGSF 173
                 4433377888888888999999999999988888888877666156677778888855555568999**************9876 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.029
        MerC  56 vgyrrhrktsvlvlgalGllillvalflgteaeetllfgslwqvltvlGaalLaiahv 113
                 + +r+ r  + +++g++G++ +l alf+   +++ ll+ +   +l++ G++ ++ a +
  EPX72589.1 214 PEWRSFRAILFVIMGLFGIFPVLHALFIY--TIKDLLVRMGLGWLFLQGVFYIVGATI 269
                 46777888888888888888888888888..455555666666666666666666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1076  (0.0600145); expected 358.6 (0.02)
Passed bias filter:                      429  (0.0239277); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 2440.87
//
Query:       EPX72590.1  [L=759]
Description: dynamin Dnm1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.4e-98  328.4   0.0      6e-98  327.6   0.0    1.4  1  Dynamin_M  Dynamin central region
    1.9e-54  184.2   0.1    4.5e-54  183.0   0.1    1.7  1  Dynamin_N  Dynamin family
    4.7e-25   87.6   5.5    1.4e-24   86.1   5.5    1.9  1  GED        Dynamin GTPase effector domain
    0.00078   19.5   0.2     0.0029   17.7   0.2    2.0  1  MMR_HSR1   50S ribosome-binding GTPase


Domain annotation for each model (and alignments):
>> Dynamin_M  Dynamin central region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  327.6   0.0  1.3e-101     6e-98       1     284 [.     242     528 ..     242     529 .. 0.97

  Alignments for each domain:
  == domain 1  score: 327.6 bits;  conditional E-value: 1.3e-101
   Dynamin_M   1 vvdilenkvipLklGYvgVvnRsqkdInkkksieealkkEkaFFeshpayrkladkaGtpyLakkLnqiLvehIrkslPelkkkineklqklekeleel 99 
                 ++dil+++v+pLklG++  vnRsq dI ++ks+++al +E+aFF +hpayr + +++Gt yLak+L+++Lv hIr+ lP++k+++++++++++++le++
  EPX72590.1 242 AMDILSGRVYPLKLGFIPTVNRSQSDIISHKSLRDALSSENAFFANHPAYRAIVNRCGTFYLAKTLSNLLVAHIRDRLPDIKARLSTLISQTQSQLENY 340
                 79************************************************************************************************* PP

   Dynamin_M 100 geskpsde.ektklllqlitkfkedfkklieGese.vstkelsggarireiFnetlekslekidpleelsdeeirtairnsrGrelplfvpekaFealv 196
                 g +k sd+ +++ +llq ++ f+++f ++i+G+s+ + tkelsggar+++iFn++++++l++idpl++ls  +irtai ns+G++ +lf++e+aF++lv
  EPX72590.1 341 GIFKISDKsQRGIILLQAMNRFANSFIASIDGNSSnIPTKELSGGARLYSIFNNVFSTTLNSIDPLQNLSIMDIRTAILNSTGSRATLFLSEMAFDILV 439
                 *88888888************************66488************************************************************* PP

   Dynamin_M 197 kkqikkleepalkcvelVyeelekiveklek.elkrFpnLreeikevvedllreqeeptkemienliemelayintnhpdfigalkair 284
                 k+q++ l +p+++cvelVyeel+ki++   + +++rFp+L+ ++ e v+dllre+++pt +++e+li++++ayintnhpdf+g + a++
  EPX72590.1 440 KPQLALLAPPCHECVELVYEELMKICHYSGDaDMSRFPKLQTALIETVSDLLRENLSPTFSFVESLISIQMAYINTNHPDFLGVQGAMS 528
                 ****************************6666***************************************************999986 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  183.0   0.1     1e-57   4.5e-54       1     167 [.      29     232 ..      29     233 .. 0.93

  Alignments for each domain:
  == domain 1  score: 183.0 bits;  conditional E-value: 1e-57
                 EEEEEBTTTTHHHHHHHHHTS--S---SSS---S-EEEEE.......................CCT---C.....CS...SSEEEE....T-EB--CHH CS
   Dynamin_N   1 iavvGsqSsGKSSvlnaLlgedilprgpnptTrrplelql.......................geeeeas.....eravkeelkek....ekkledfse 67 
                 i+vvGsqS GKSSvl++++g+d+lprg++++Trrpl+lql                       g           +r+ +e + e+    + +++df +
  EPX72590.1  29 IVVVGSQSCGKSSVLENIVGKDFLPRGTGIVTRRPLILQLinlkeeeygadnedsqqdssntdG-----AttsleNRSDQEGYAEFlhlpNVRFTDFGK 122
                 89**************************************999999999988876655555443.....04444488888888888************* PP

                 HHHHHHHHHHHHHTSSSS--SS-EEEEEEETTS-SEEEEE---B-SSSGTTS.........HHHHHHH.STTEEEEEEEETTS-CCC-CHHHHHHHHST CS
   Dynamin_N  68 vreeieketekiagankgiskkvillkilsllvkgltlvDlPGldsvnkrdq.........elvkeyi.kkadiilavtsanhdlsnsealflarevdp 156
                 vr eie+et+++agankgi+k +i+lk++s +v +ltl+DlPGl++++++dq         +l++eyi k+++iilav++an d+ nse l+lar+vdp
  EPX72590.1 123 VRAEIENETMRVAGANKGINKLPINLKVYSKHVLNLTLIDLPGLTKIPVGDQptdiesqtrSLIMEYIsKPNSIILAVSPANFDIVNSEGLKLARLVDP 221
                 *************************************************************************************************** PP

                 TBTTEEEEEE- CS
   Dynamin_N 157 kgkrtivvltk 167
                 kgkrti+vltk
  EPX72590.1 222 KGKRTIGVLTK 232
                 **********9 PP

>> GED  Dynamin GTPase effector domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.1   5.5   3.1e-28   1.4e-24       1      92 []     667     758 ..     667     758 .. 0.98

  Alignments for each domain:
  == domain 1  score: 86.1 bits;  conditional E-value: 3.1e-28
                 XXXXXTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCCCCHHHCCTTSGGGHHHHT---SCHCCCCHHHHHHHHHHHHHCCCCCHH CS
         GED   1 reeseveeirslvksYfnivrktiadqiPkaimhllvneakeslqkellakLykkedldeLLkEdeeiaekRkelkkrlealkkAreilsev 92 
                 ree+eve i++l++sYf  +rk i dq+Pk+imhllvn +k+ +q++l+++Ly++e +d+LL Ede+i+++R++ ++ l+++ +A++++s+v
  EPX72590.1 667 REELEVELIQELITSYFILTRKIIVDQVPKVIMHLLVNASKDAVQNRLVSSLYREELFDSLLIEDENIKSEREKNERLLSVYMQANKMISNV 758
                 6899*************************************************************************************975 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.2   6.6e-07    0.0029       2      71 ..      29     190 ..      28     232 .. 0.76

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 6.6e-07
                 EEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEE.ETTEE.................................................... CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvk.lkgke.................................................... 47 
                 +++vG    GKS+++  ++g+      +  +Tr +   ++  lk++e                                                    
  EPX72590.1  29 IVVVGSQSCGKSSVLENIVGKDFLPRGTGIVTRRPLILQLInLKEEEygadnedsqqdssntdgattslenrsdqegyaeflhlpnvrftdfgkvraei 127
                 89*******************99999999999999666554233333666677788899999999999999**************************** PP

                 ..............................EEEEECGGC...........SSHHHHHHHHHHHHH CS
    MMR_HSR1  48 ..............................ielvDtpGl...........iegaseekglgkafl 71 
                                               ++l+D+pGl           i  +s+ ++l  ++ 
  EPX72590.1 128 enetmrvagankginklpinlkvyskhvlnLTLIDLPGLtkipvgdqptdI--ESQTRSLIMEYI 190
                 **************************************8443322222111..233334444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (759 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       590  (0.0329076); expected 358.6 (0.02)
Passed bias filter:                      405  (0.0225891); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.65u 0.28s 00:00:00.93 Elapsed: 00:00:00.43
# Mc/sec: 5341.08
//
Query:       EPX72591.1  [L=109]
Description: 60S ribosomal protein L30 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-26   91.8   0.0    1.9e-26   91.6   0.0    1.1  1  Ribosomal_L7Ae  Ribosomal protein L7Ae/L30e/S12e/Gadd45 famil


Domain annotation for each model (and alignments):
>> Ribosomal_L7Ae  Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.6   0.0   1.1e-30   1.9e-26       2      94 ..      15     107 ..      14     108 .. 0.98

  Alignments for each domain:
  == domain 1  score: 91.6 bits;  conditional E-value: 1.1e-30
                     HHHHHHHHHHHHTEEEESHHHHHHHHHTTTESEEEEETTSSSGGHHHHHHHHHH..HTTEEEEEESCHHHHHHHTTSSSECSEEEEEESTTTHHH CS
  Ribosomal_L7Ae   2 aieevlkkakkagklvlGlkevtkalergeaklvilAedvepeekkkllealck..ekevpyvkvkskkeLGelvgkkrpvsalaikdegdskdl 94 
                     +++++l + +k+gk+vlG+k ++k+l++g+akl+++A +++p +k++ le++++  + +v+++++++  +LG+++gk ++v +lai+d+gds++l
      EPX72591.1  15 TLNSKLALTMKSGKYVLGYKSTLKTLRSGKAKLILIAGNCPPLRKSE-LEYYAMlsKANVHHYSGSN-IDLGTACGKLFRVGVLAITDAGDSDIL 107
                     6899*******************************************.*******************.************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       203  (0.0113224); expected 358.6 (0.02)
Passed bias filter:                      190  (0.0105974); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.41
# Mc/sec: 789.66
//
Query:       EPX72592.1  [L=1375]
Description: STE/STE11 protein kinase Wis4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      5e-64  216.2   0.0    1.2e-63  215.0   0.0    1.7  2  Pkinase       Protein kinase domain
    2.4e-33  115.5   0.0    4.4e-33  114.7   0.0    1.4  1  Pkinase_Tyr   Protein tyrosine kinase
     0.0015   17.9   0.2      0.012   15.0   0.2    2.4  1  Kinase-like   Kinase-like
  ------ inclusion threshold ------
      0.012   15.5   0.0       0.22   11.4   0.1    2.6  2  APH           Phosphotransferase enzyme family
      0.023   13.7   0.0      0.046   12.8   0.0    1.4  1  Seadorna_VP7  Seadornavirus VP7
       0.04   13.6   4.1      0.045   13.4   0.7    2.6  2  RabGAP-TBC    Rab-GTPase-TBC domain


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       2.3   6.9e+03      54      88 ..     621     658 ..     615     666 .. 0.72
   2 !  215.0   0.0   3.9e-67   1.2e-63       7     264 .]    1022    1285 ..    1016    1285 .. 0.91

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 2.3
                 HHSCTTB--EEEEEEE...SSEEEEEEE--TTEBHHHH CS
     Pkinase  54 klkhpnivrlyevfee...kdelylvleyveggeladl 88 
                 +++ ++i+r+++v+++   ++  y+v + + ++ +++l
  EPX72592.1 621 QVRFRKILRFFDVYNSrlqNSAEYIVHDSCLNEMVDRL 658
                 44588999999999988877888888888887644444 PP

  == domain 2  score: 215.0 bits;  conditional E-value: 3.9e-67
                  EEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH..HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHHHH CS
     Pkinase    7 lGeGsfGkVykaveketgkivAvKkikkekakkkke..kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseeeak 101 
                  + +G fG Vy++v+ +tg+  AvK+ik  + ++ k   +++ +E+++l+kl+hpniv +y+v  + +++y+++e+++gg+ladll++ ++ +e+ + 
  EPX72592.1 1022 VKSGMFGDVYSGVNLDTGDLLAVKEIKILDSRSLKStvDQIHNEMTVLEKLNHPNIVSYYGVEVHREKVYIFMELCQGGSLADLLSHGRIEDEAVVG 1118
                  558************************999999888899**********************************************977778888999 PP

                  HHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS...........BCTTTSCGGGS-HHHH..TTSCBSHHHHHHHHHH CS
     Pkinase  102 kiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk...........ltsfvgtseYlAPEvl..keneyskkvDvWslGv 185 
                   ++ q+le+l y+Hs++++HrD+Kp N+L+d++g++K +DFG a  +   ++           ++s  gt+ Y APE++  ++++   ++D+W+lG+
  EPX72592.1 1119 TYVLQLLEALCYMHSRNVLHRDIKPGNLLLDRNGNIKFSDFGSALYVPPPEEstarlediqleMHSLAGTPMYTAPEIIvgTKKGRFGSMDIWGLGC 1215
                  ************************************************99999**************************8655666789******** PP

                  HHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase  186 ilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264 
                  +++e+l+g++p++   + ++ ++++ +    + ++   + ++p  ++i + a+d+l+++++ dp+kR+ta el  hp++
  EPX72592.1 1216 VVLEMLAGCTPWN---QMDNEWAIMYH----IAVM--HTPTIPSSYQITSLARDFLERCFECDPEKRPTALELYLHPWV 1285
                  *************...33333444444....3444..45899************************************6 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.7   0.0   1.5e-36   4.4e-33       5     255 ..    1020    1279 ..    1016    1282 .. 0.80

  Alignments for each domain:
  == domain 1  score: 114.7 bits;  conditional E-value: 1.5e-36
                   EEEEEESSEEEEEEEEETTTTSSEEEE.EEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTT CS
  Pkinase_Tyr    5 kklGeGafGkVvegtlkgekekkevkV.avKtlkeeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekek 99  
                   + + +G fG+V++g     ++ + + V  +K+l++++ +++ +++ +e+++++kl+hpniv+++gv +++e+++i +e+++gG+L + L +    +
   EPX72592.1 1020 QFVKSGMFGDVYSGVNL--DTGDLLAVkEIKILDSRSLKSTVDQIHNEMTVLEKLNHPNIVSYYGVEVHREKVYIFMELCQGGSLADLLSHG---R 1110
                   56789*********999..3333333325888999999999************************************************987...5 PP

                   SBHHH.HHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEET..TTSSEE......EETTSSTSGGGGS-HHHHHHSE..EEH CS
  Pkinase_Tyr  100 ltlkd.llsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardi..ekddey......vkkeeaklpvkWmapEslkekk..fts 184 
                   ++ +  +  ++lq+ +++ y++s++++Hrd+   N Ll++n  +k sDfG a  +   ++++        + ++      ++apE++  +k     
   EPX72592.1 1111 IEDEAvVGTYVLQLLEALCYMHSRNVLHRDIKPGNLLLDRNGNIKFSDFGSALYVppPEESTArlediqLEMHSLAGTPMYTAPEIIVGTKkgRFG 1206
                   555551557999**************************************9998853222222333332344445566789*****9877755445 PP

                   HHHHHHHHHHHHHHHTTSSGTTTTSHHHH.HHHHH..HTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHH CS
  Pkinase_Tyr  185 ksDvWsfGvllwEiftlgespypglknee.vlekl..kegkrlekpekcpeelyelmkkcweedpeeRptfsel 255 
                   + D+W  G ++ E++  g +p+++++ne  ++ ++   +   ++   ++++   +++++c+e dpe+Rpt  el
   EPX72592.1 1207 SMDIWGLGCVVLEMLA-GCTPWNQMDNEWaIMYHIavMHTPTIPSSYQITSLARDFLERCFECDPEKRPTALEL 1279
                   67*************9.********777515555522444455666677888899**************98766 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.2   3.9e-06     0.012     148     261 ..    1120    1238 ..    1040    1267 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 3.9e-06
  Kinase-like  148 llTlqlirlaanLqakglvhgkftvdnllldekgglmlggft.aLvragtkvvlseve............kgfaPpEllgsrggytrknktkmthk 230 
                   ++ lql+    +++++ ++h ++++ nllld++g ++  +f+ aL+    +   +  e              +  pE++         +k +   +
   EPX72592.1 1120 YV-LQLLEALCYMHSRNVLHRDIKPGNLLLDRNGNIKFSDFGsALYVPPPEESTARLEdiqlemhslagtPMYTAPEIIVG------TKKGR-FGS 1207
                   44.79999999******************************7256654333332333332255544444333444443322......11222.236 PP

  Kinase-like  231 ldaWqlGlviyriwclklPltlateeakeew 261 
                   +d W+lG v++ + +   P +++ +e  + +
   EPX72592.1 1208 MDIWGLGCVVLEMLAGCTPWNQMDNEWAIMY 1238
                   9999999999999999999888888777766 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0     0.046   1.4e+02      34     106 ..    1056    1132 ..    1047    1135 .. 0.82
   2 ?   11.4   0.1   7.4e-05      0.22     152     201 ..    1121    1167 ..    1094    1172 .. 0.69

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.046
                  HHHHHHHHHHHHHHHHTT-B--B-CTTBS-EEETTEEEEEEE----EE-SS......HHHHHHHHHHHHHHHHHHCCHH CS
         APH   34 aeeirrevallrlLakagvpvPevlagdtddeeigllfalieyvpgrsllr......klsaaqlpellealgeflaalh 106 
                  + ++ +++ ++++L+k++   P ++ +   + +++ ++ ++e + g sl++       +++a+ + ++ +l e+l+ +h
  EPX72592.1 1056 KSTVDQIHNEMTVLEKLNH--PNIVSYYGVEVHREKVYIFMELCQGGSLADllshgrIEDEAVVGTYVLQLLEALCYMH 1132
                  5667889999999999966..89999999**********************8887777777777777777777777777 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 7.4e-05
                  HHHHHHHH--SSS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-EEEEC CS
         APH  152 vlaalaallpgelptvllHgDlhpgNllvdpddgrvtGviDfedaglgpp 201 
                  vl+ l+al     ++ +lH+D++pgNll+d ++g +  + Df+ a + pp
  EPX72592.1 1121 VLQLLEALCYM-HSRNVLHRDIKPGNLLLD-RNGNI-KFSDFGSALYVPP 1167
                  55555555554.677789************.65655.5888888877766 PP

>> Seadorna_VP7  Seadornavirus VP7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   1.5e-05     0.046     147     189 ..    1121    1161 ..    1112    1165 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.5e-05
  Seadorna_VP7  147 ivaglkdLmdfhsestnllhGDcnpenlmcDknGylklvDPvs 189 
                    ++  l++L  +h  s n+lh D++p nl+ D+nG++k+ D +s
    EPX72592.1 1121 VLQLLEALCYMH--SRNVLHRDIKPGNLLLDRNGNIKFSDFGS 1161
                    555588999999..899*********************99776 PP

>> RabGAP-TBC  Rab-GTPase-TBC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.7   1.5e-05     0.045     132     191 ..     569     634 ..     528     650 .. 0.77
   2 ?   -0.8   0.1      0.34     1e+03      25      59 ..    1310    1344 ..    1288    1352 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1.5e-05
  RabGAP-TBC 132 pg.lkrklkvleellkkkdpklykhlke....egldlelfaikwfltlfl.refpletvlrlwDll 191
                 +g + ++  ++  ll++ + ++++hl+      +  +++ +++wf tl++ +++ ++ +lr +D++
  EPX72592.1 569 DGgIYEMASHFGYLLNRLLMNVHRHLEAhlkgPEERSTMSLTNWFTTLLKnTQVRFRKILRFFDVY 634
                 4457888888888888888888888877666656668999**********999***********87 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.34
  RabGAP-TBC   25 ekkqeksekeksklekseeskelsqIkkDvprtfp 59  
                     +++++k+ ++  ++e++++++++++D+p   p
  EPX72592.1 1310 LALEDERKKKLNEILHAENDENMKTVENDIPSMPP 1344
                  34455666677777777888889999999997655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1375 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       582  (0.0324614); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.85u 0.26s 00:00:01.10 Elapsed: 00:00:00.43
# Mc/sec: 9544.07
//
Query:       EPX72593.1  [L=194]
Description: Vid24 family cytoplasmic vesicle protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      1e-52  178.2   2.1    1.2e-52  178.0   2.1    1.0  1  Vac_ImportDeg  Vacuolar import and degradation protein


Domain annotation for each model (and alignments):
>> Vac_ImportDeg  Vacuolar import and degradation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.0   2.1   6.6e-57   1.2e-52       1     162 []       6     183 ..       6     183 .. 0.91

  Alignments for each domain:
  == domain 1  score: 178.0 bits;  conditional E-value: 6.6e-57
  Vac_ImportDeg   1 flrpgakfkGeqqsgkk.kyevkvelktvdleeslltGfleikglteekpeittffegeiidekysfltkkkkwkaseetDlehWkkleafkklla 95 
                    flr+ga+f+G q+s+ + +++v+v++ +v++e+s+l+Gf++i+gl+ +++++tt+fe+eii +k++fltk+++w+ase+tD++hWk+l af+   +
     EPX72593.1   6 FLRNGAQFHGIQKSDGNkTFDVSVTVLHVNMEQSMLCGFFKISGLSGNNSSLTTYFEAEIIGDKFGFLTKWPEWGASESTDYKHWKRLGAFQYAKR 101
                    79**********9986659************************************************************************87555 PP

  Vac_ImportDeg  96 k.........dlenkelifmrwkekflvpde......rvksiegasfeGfYYivldqstgsieGlYyhkksekfqqLeLkpv 162
                    k         d  +k +i+mrwke  ++++       + +s +++sfeGfYYi+++q+tg+i+G+Yyh k ++fq LeL+pv
     EPX72593.1 102 KvplrrikpyDPWKKGTIYMRWKELAMLDKVndfqfrSRNSSSDVSFEGFYYIAFSQRTGRISGYYYHYKFDHFQYLELDPV 183
                    599999999899999*********9999833445554555679************************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       388  (0.0216409); expected 358.6 (0.02)
Passed bias filter:                      286  (0.0159518); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1474.58
//
Query:       EPX72594.1  [L=343]
Description: NAK protein kinase Ppk13 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.7e-41  141.7   0.2    2.5e-24   86.1   0.0    2.1  2  Pkinase       Protein kinase domain
    1.4e-22   80.2   0.0    3.5e-22   78.9   0.0    1.6  1  Pkinase_Tyr   Protein tyrosine kinase
    1.2e-05   24.8   0.0     0.0008   18.8   0.0    2.1  2  Kinase-like   Kinase-like
  ------ inclusion threshold ------
      0.053   12.6   0.2       0.18   10.8   0.0    1.8  2  Seadorna_VP7  Seadornavirus VP7
       0.17   11.8   0.0       0.28   11.1   0.0    1.3  1  APH           Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.5   0.5   5.8e-18   2.1e-14       1     116 [.      32     155 ..      32     157 .. 0.92
   2 !   86.1   0.0     7e-28   2.5e-24     117     261 ..     187     336 ..     185     338 .. 0.87

  Alignments for each domain:
  == domain 1  score: 53.5 bits;  conditional E-value: 5.8e-18
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEE.....SSEEEEEEE--TTEBHHHHHH...H CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfee.....kdelylvleyveggeladlle...r 91 
                 y++l+ lGeG+++ Vy + ++e+g+++A+Kkik ++ ++ ++ k+l+E k+++k++ p++++ +ev  +      +++y+++ + ++g++a++++   +
  EPX72594.1  32 YKVLQLLGEGGYAFVYLIEHAENGQKFALKKIKCHSGREGTQ-KALTEAKFHEKFNNPYLLKSLEVQLQkesdgVQYVYIMFPFYQKGTVAQIVQnqhA 129
                 78899******************************9999886.9*********************998878888899******************9885 PP

                 HSS.--HHHHHHHHHHHHHHHHHHHH CS
     Pkinase  92 kgs.lseeeakkiakqilegleylHs 116
                 kgs +s++ + ++   +l++l+ylH+
  EPX72594.1 130 KGSfVSKRYILSWSICLLQALKYLHN 155
                 55558999999**************7 PP

  == domain 2  score: 86.1 bits;  conditional E-value: 7e-28
                 TTEE-SS-SGGGEEEE.TTTEEEE-SGTTSEESSSSCS..........BCTTTSCGGGS-HHHH...TTSCBSHHHHHHHHHHHHHHHHHSS-STTTSS CS
     Pkinase 117 kgiiHrDlKpeNiLid.ekgelKitDFGlakelesssk..........ltsfvgtseYlAPEvl...keneyskkvDvWslGvilyelltgkppfsgek 201
                 ++ +H D+KpeN+L++ + ++  +tDFG   ++ ss +          + s+ +t  Y+APE+     ++ +++k+D+Ws G+ l+ +++g +pf++  
  EPX72594.1 187 NCYLHGDVKPENLLLSnDMRNAVLTDFGSIYKIPSSISdnsqaiafqdMASENCTMSYRAPELFhvrPGTTITEKADIWSFGCFLFAVMFGYTPFEK-- 283
                 6679************555569**********9999989999*********************988666888************************2.. PP

                 HHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTS CS
     Pkinase 202 gkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqh 261
                        ++ q  +++  +   + ++p ++   +++ +l++ +l+ +p++R++ae+l++h
  EPX72594.1 284 -------QVSQGGSLALAVCSAQYSFPSRHPYCSNMVNLIRACLQLNPEQRPSAEDLIRH 336
                 .......2333233333334668999999999*************************998 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.9   0.0   9.8e-26   3.5e-22       3     258 ..      34     336 ..      32     337 .. 0.85

  Alignments for each domain:
  == domain 1  score: 78.9 bits;  conditional E-value: 9.8e-26
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSS.....EEEEEE--TTEBHHHHHHHT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeep.....llivteyvkgGdLlkfLrkk 95 
                  + + lGeG ++ V+  +      ++ +k a+K++k ++ +e +++ l+eak+ +k+++p ++k l v +++e+     ++i++ + ++G++ + ++++
   EPX72594.1  34 VLQLLGEGGYAFVYLIEHA----ENGQKFALKKIKCHSGREGTQKALTEAKFHEKFNNPYLLKSLEVQLQKESdgvqyVYIMFPFYQKGTVAQIVQNQ 127
                  56789********998877....8999******************************************7766678889******************9 PP

                  ..................................CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETT.EEEE-STTTHEET....T CS
  Pkinase_Tyr  96 ..................................ekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenk.vvkisDfGLardi....e 154
                                                    +++++++++l+++ ++  k  +  +s+ ++H d+   N Lls+++  + ++DfG   +i    +
   EPX72594.1 128 hakgsfvskryilswsicllqalkylhngtdeseSENTVDTTNLIDLGMES-KPARKPSSNCYLHGDVKPENLLLSNDMrNAVLTDFGSIYKIpssiS 224
                  ****************************88877777777777777777774.44455688889*************97647899****6665533214 PP

                  TSSEE...EETTSSTSGGGGS-HHHHHHSE...EEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHH...HHHHHHTTEES-BBTTSBHHHHHHHHHHT- CS
  Pkinase_Tyr 155 kddey...vkkeeaklpvkWmapEslkekk...ftsksDvWsfGvllwEiftlgespypglknee...vleklkegkrlekpekcpeelyelmkkcwe 243
                  ++++    ++  ++++ + + apE ++ +    +t+k+D+WsfG +l+ ++  g +p+++  ++    +l+  ++++  +  +  ++++ +l++ c++
   EPX72594.1 225 DNSQAiafQDMASENCTMSYRAPELFHVRPgttITEKADIWSFGCFLFAVMF-GYTPFEKQVSQGgslALAVCSAQYSFPSRHPYCSNMVNLIRACLQ 321
                  455546777888999**********99876666****************998.*****9884433222455559999999999999************ PP

                  SSGGGS--HHHHHHH CS
  Pkinase_Tyr 244 edpeeRptfselvek 258
                   +pe+Rp+ ++l+++
   EPX72594.1 322 LNPEQRPSAEDLIRH 336
                  **********99876 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.1   0.1    0.0066        23      12      60 ..      30      80 ..      22     152 .. 0.73
   2 !   18.8   0.0   2.2e-07    0.0008     166     288 .]     190     327 ..     181     327 .. 0.78

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.0066
  Kinase-like 12 rtlvrgellkkgdrsvvfevkdqetgeplavkvfllps..easkkdlerlk 60
                  ++++ +ll++g+   v++++  e g+++a+k     s  e  +k+l + k
   EPX72594.1 30 EQYKVLQLLGEGGYAFVYLIEHAENGQKFALKKIKCHSgrEGTQKALTEAK 80
                 4567779*************************9988876566677765544 PP

  == domain 2  score: 18.8 bits;  conditional E-value: 2.2e-07
  Kinase-like 166 vhgkftvdnllldekgg.lmlggftaLvragtkvvlsevekgfaP..pEllgsrgg....ytrknktkmthkldaWqlGlviyriwclklPltlatee 256
                  +hg+++++nlll ++ +  +l++f+++++   +   ++ + +f+    E +    +    ++ +  t++t k d W  G   + +   + P++++ ++
   EPX72594.1 190 LHGDVKPENLLLSNDMRnAVLTDFGSIYKIPSSISDNSQAIAFQDmaSENCTMSYRapelFHVRPGTTITEKADIWSFGCFLFAVMFGYTPFEKQVSQ 287
                  79**********999873689*********999987777766653113333322224467788888****************************9998 PP

  Kinase-like 257 akeew........kfklckkipekvkaLlkkfLqlsqedR 288
                  +++          +f   ++   ++  L++  Lql+ e+R
   EPX72594.1 288 GGSLAlavcsaqySFPSRHPYCSNMVNLIRACLQLNPEQR 327
                  8775456666655666666777888888888888888877 PP

>> Seadorna_VP7  Seadornavirus VP7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0       0.2   7.1e+02     190     233 ..      19      63 ..      15     115 .. 0.68
   2 ?   10.8   0.0   5.1e-05      0.18     139     186 ..     164     212 ..     159     240 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.2
  Seadorna_VP7 190 Ller.tvvyvnieYesltqeaevkvfvlsllelveklrkieleei 233
                   Ll++  vv++n++Y+ l    e +   + l+e  e+ +k  l++i
    EPX72594.1  19 LLNNdLVVLKNEQYKVLQLLGEGGYAFVYLIEHAENGQKFALKKI 63 
                   554416888999999988877776655667777777777777776 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 5.1e-05
  Seadorna_VP7 139 irvltvniivaglkdLmdfhsestnllhGDcnpenlm.cDknGylklvD 186
                     v t+n+i  g+++      +s+ +lhGD++penl+ ++ + +  l D
    EPX72594.1 164 NTVDTTNLIDLGMESKPARKPSSNCYLHGDVKPENLLlSNDMRNAVLTD 212
                   567899**************9**************75266666666666 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   7.8e-05      0.28     158     187 ..     181     207 ..     137     218 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 7.8e-05
                 HH--SSS-EEEE-SS-SGGGEEEC..TTEE CS
         APH 158 allpgelptvllHgDlhpgNllvdpddgrv 187
                 a+ p  ++ + lHgD +p Nll+  +d r 
  EPX72594.1 181 ARKP--SSNCYLHGDVKPENLLLS-NDMRN 207
                 3444..899**************9.55553 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       422  (0.0235373); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2555.70
//
Query:       EPX72595.1  [L=1111]
Description: Lid2 complex subunit Snt2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.9e-17   61.2  21.0    7.7e-15   55.0   1.9    4.8  4  zf-HC5HC2H_2  PHD-zinc-finger like domain
      1e-15   57.6   0.1    2.2e-15   56.6   0.1    1.6  1  BAH           BAH domain
    6.3e-12   45.6  18.1      3e-09   37.0   0.0    5.1  5  zf-HC5HC2H    PHD-like zinc-binding domain
      2e-08   34.0  21.1    3.3e-08   33.3  11.3    6.8  7  PHD           PHD-finger
  ------ inclusion threshold ------
      0.012   15.2   0.5      0.012   15.2   0.5    4.4  5  Zn_ribbon_17  Zinc-ribbon, C4HC2 type
      0.015   14.9   0.6      0.015   14.9   0.6    5.9  6  PHD_2         PHD-finger
       0.68    9.9  34.4      0.022   14.6   4.9    5.1  5  C1_1          Phorbol esters/diacylglycerol binding domain (C
        6.5    7.2  12.3        1.8    9.0   1.7    3.4  3  PHD_3         PHD domain of transcriptional enhancer, Asx


Domain annotation for each model (and alignments):
>> zf-HC5HC2H_2  PHD-zinc-finger like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   0.8   0.00015      0.33      56      86 ..     246     276 ..     216     286 .. 0.81
   2 ?    4.3   0.7      0.02        44      49      86 ..     785     820 ..     760     838 .. 0.74
   3 !   55.0   1.9   3.5e-18   7.7e-15       2      97 ..     878     974 ..     877     985 .. 0.87
   4 ?    1.4   0.1      0.16   3.5e+02      51      74 ..    1069    1099 ..    1051    1104 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00015
  zf-HC5HC2H_2  56 ekCllCkkr..kGaciqCskkeCktafHvtCal 86 
                   + C +Ck+     +++qC++  C++ +H+ C +
    EPX72595.1 246 RLCNVCKEWcsLDLSVQCAD--CNKHYHMKCVQ 276
                   57******966678889988..*********87 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.02
  zf-HC5HC2H_2  49 ikkerlkekCllCkkr.kGaciqCskkeCktafHvtCal 86 
                    +  ++k++C lC  +     ++C++  C  + H  C  
    EPX72595.1 785 SP-LNTKKECNLCGGSnLDNLVECYQ--CGLIVHKSCQG 820
                   33.3489******987578899**99..*********75 PP

  == domain 3  score: 55.0 bits;  conditional E-value: 3.5e-18
  zf-HC5HC2H_2   2 eCvlCkkkgGal..kktsderwvHvlCallvpevsfsnvaerepvdvekikkerlkekCllCkkrkGaciqCskkeCktafHvtCalaaglvmeled 96 
                   eC lC +++  +  ++t++ +wvH+lCa ++p v +s+  +   + + ++++  + ++C +C++ +G++++C++ + +++ Hv+Cal+ag  + +e 
    EPX72595.1 878 ECLLCCQTDPQFsmRRTAECNWVHILCAAWTPGVVISSGDNEPILGIGNLPSGVWGNTCEICRHDHGISVRCQN-DYSSSAHVICALKAGWNLCFEL 973
                   8****9998754339999******************9998866566**************************99.78999*********98876665 PP

  zf-HC5HC2H_2  97 l 97 
                   +
    EPX72595.1 974 I 974
                   5 PP

  == domain 4  score: 1.4 bits;  conditional E-value: 0.16
  zf-HC5HC2H_2   51 kerlkekCllCkkr.......kGaciqCskk 74  
                    ++ + ekC+ C+++       +G+c +C+ +
    EPX72595.1 1069 QQVIDEKCSRCSTTtspywwpEGLCHTCYFQ 1099
                    4557899****9999999**9*******875 PP

>> BAH  BAH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.6   0.1   9.9e-19   2.2e-15       3     117 ..      91     204 ..      89     209 .. 0.93

  Alignments for each domain:
  == domain 1  score: 56.6 bits;  conditional E-value: 9.9e-19
                 EETTGEEEEEETTSTTEEEEEEEEEEEEETTST..CEEEEEEEEEEECGGGSTTTTHCCCTTEEEEEEEEEEEEGGGEEEEEEEEEHHHHCTECCHCHH CS
         BAH   3 yavGdfVyfddtstdepyqirrIeeLkenakne..eaeatvlvdwflrpeetksalklrqkrElfltrqseilplaairgkcrVvllsdleeaqnylpk 99 
                 ++++dfV +++  + ep+qi+r+  +++++  +  +    v+++wf+rp+++  +++  ++r l+++ +s+i+++  i++ ++V +++++++++ y+  
  EPX72595.1  91 IQPNDFVFVSSPYAGEPFQIARVMSFEKSEACLgtNLYDSVRLNWFFRPRDI--QRNSSDTRLLYASMHSDIYNIGFIKELVSVKHKTQIQNLNDYKR- 186
                 689***************************9999999***************..8888888************************************8. PP

                 CSTTEEEEEEEEET.TTTE CS
         BAH 100 klddtFycslvydp.takt 117
                  + + Fy++ ++d+  +k+
  EPX72595.1 187 -QSKCFYYDRLFDQnINKV 204
                 .************944444 PP

>> zf-HC5HC2H  PHD-like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   1.0   2.6e-05     0.059      34      67 ..     243     276 ..     215     283 .. 0.77
   2 ?   -2.6   0.3         3   6.7e+03      41      46 ..     650     655 ..     634     682 .. 0.52
   3 ?    4.2   0.3     0.023        51      34      68 ..     788     821 ..     764     843 .. 0.82
   4 !   37.0   0.0   1.3e-12     3e-09       1      75 [.     901     971 ..     901     983 .. 0.90
   5 ?   -0.6   0.1      0.74   1.6e+03      29      53 ..    1066    1097 ..    1044    1101 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 2.6e-05
  zf-HC5HC2H  34 rkklkCylCkkk..vGaciqCskkkCkkafHvtCak 67 
                 ++   C +Ck+      ++qC+   C+k++H++C +
  EPX72595.1 243 ENPRLCNVCKEWcsLDLSVQCAD--CNKHYHMKCVQ 276
                 45578*****8733567888877..*********87 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 3
  zf-HC5HC2H  41 lCkkkv 46 
                  C++++
  EPX72595.1 650 NCQSRK 655
                 444332 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.023
  zf-HC5HC2H  34 rkklkCylCk.kkvGaciqCskkkCkkafHvtCake 68 
                 + k++C lC  ++    ++C +  C    H  C  +
  EPX72595.1 788 NTKKECNLCGgSNLDNLVECYQ--CGLIVHKSCQGS 821
                 46889****95558999***99..********9755 PP

  == domain 4  score: 37.0 bits;  conditional E-value: 1.3e-12
  zf-HC5HC2H   1 HvvCalwipevvfeeekeiemeeiedvekikkerkklkCylCkkkvGaciqCskkkCkkafHvtCakeaglllee 75 
                 H +Ca w+p+vv+++ ++   e+i ++ + ++  + ++C +C++ +G++++C++ + +++ Hv+Ca +ag  l +
  EPX72595.1 901 HILCAAWTPGVVISSGDN---EPILGIGNLPSGVWGNTCEICRHDHGISVRCQN-DYSSSAHVICALKAGWNLCF 971
                 99**********998876...9******************************99.668889********987655 PP

  == domain 5  score: -0.6 bits;  conditional E-value: 0.74
  zf-HC5HC2H   29 kikkerkklkCylCkkk.......vGaciqCs 53  
                  +++++  + kC+ C+++        G c +C 
  EPX72595.1 1066 SEDQQVIDEKCSRCSTTtspywwpEGLCHTCY 1097
                  5667778899*999976556666677777775 PP

>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.3  11.3   1.5e-11   3.3e-08       2      51 ..     248     296 ..     247     297 .. 0.92
   2 ?   -1.4   0.1      0.97   2.2e+03      43      51 ..     645     653 ..     635     656 .. 0.61
   3 ?    1.2   0.0      0.16   3.5e+02       9      22 ..     670     683 ..     664     686 .. 0.80
   4 !   15.5   2.1   5.3e-06     0.012       2      34 ..     793     823 ..     792     831 .. 0.87
   5 !    5.1   0.1    0.0095        21      38      50 ..     854     866 ..     843     868 .. 0.66
   6 ?   -2.7   2.3       2.5   5.7e+03      19      31 ..     895     906 ..     878     910 .. 0.60
   7 ?   -2.1   3.0       1.6   3.7e+03       2      29 ..     936     961 ..     935     964 .. 0.79

  Alignments for each domain:
  == domain 1  score: 33.3 bits;  conditional E-value: 1.5e-11
                 BTTTTSTTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSSTBSSTTTHT CS
         PHD   2 CavCkkksdeeeelvqCdgCkrwfHqkClkppleseekpegewlCekCke 51 
                 C+vCk+ +   +  vqC +C++++H+kC++ppl +++ +   w+C  C+ 
  EPX72595.1 248 CNVCKE-WCSLDLSVQCADCNKHYHMKCVQPPLVKKPPHGFGWTCALCSV 296
                 ******.999************************7777766*******85 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.97
                 TBSSTTTHT CS
         PHD  43 ewlCekCke 51 
                   +C++C++
  EPX72595.1 645 PMVCRNCQS 653
                 346666654 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.16
                 TSTTSCEEEETTTS CS
         PHD   9 sdeeeelvqCdgCk 22 
                  ++++ +++C++C+
  EPX72595.1 670 LEKNKLVIYCEKCG 683
                 466788999****7 PP

  == domain 4  score: 15.5 bits;  conditional E-value: 5.3e-06
                 BTTTTSTTSTTSCEEEETTTSCEEETTTSSSTH CS
         PHD   2 CavCkkksdeeeelvqCdgCkrwfHqkClkppl 34 
                 C++C++   + ++lv C +C+  +H++C + + 
  EPX72595.1 793 CNLCGG--SNLDNLVECYQCGLIVHKSCQGSKI 823
                 ******..789*****************88765 PP

  == domain 5  score: 5.1 bits;  conditional E-value: 0.0095
                 SHHSSTBSSTTTH CS
         PHD  38 ekpegewlCekCk 50 
                  +++++wlCe+C+
  EPX72595.1 854 LIENSQWLCESCT 866
                 233449******8 PP

  == domain 6  score: -2.7 bits;  conditional E-value: 2.5
                 TTTSCEEETTTSS CS
         PHD  19 dgCkrwfHqkClk 31 
                  +C +w+H  C  
  EPX72595.1 895 AEC-NWVHILCAA 906
                 455.599999975 PP

  == domain 7  score: -2.1 bits;  conditional E-value: 1.6
                 BTTTTSTTSTTSCEEEETT.TSCEEETTT CS
         PHD   2 CavCkkksdeeeelvqCdg.CkrwfHqkC 29 
                 C++C+    +++  v C++  +++ H+ C
  EPX72595.1 936 CEICRH---DHGISVRCQNdYSSSAHVIC 961
                 99**99...78999999743777888877 PP

>> Zn_ribbon_17  Zinc-ribbon, C4HC2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -6.1   9.6         8   1.8e+04       5      34 ..     246     276 ..     242     292 .. 0.79
   2 ?   -2.7   0.1         2   4.6e+03       6      15 ..     290     299 ..     287     301 .. 0.79
   3 ?   -1.6   0.1      0.98   2.2e+03      15      25 ..     673     683 ..     669     685 .. 0.82
   4 ?   15.2   0.5   5.5e-06     0.012       3      39 ..     789     825 ..     787     831 .. 0.87
   5 ?   -4.0   0.0       5.4   1.2e+04      19      28 ..     860     869 ..     856     872 .. 0.74

  Alignments for each domain:
  == domain 1  score: -6.1 bits;  conditional E-value: 8
  Zn_ribbon_17   5 ksCayCelavk.grvvlcgvCeHvlHasCar 34 
                   + C++C+      + v c  C+   H  C++
    EPX72595.1 246 RLCNVCKEWCSlDLSVQCADCNKHYHMKCVQ 276
                   66999976554256788*****99*****86 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 2
  Zn_ribbon_17   6 sCayCelavk 15 
                   +Ca+C+++ +
    EPX72595.1 290 TCALCSVSHR 299
                   6999999866 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 0.98
  Zn_ribbon_17  15 kgrvvlcgvCe 25 
                   +++v++c++C+
    EPX72595.1 673 NKLVIYCEKCG 683
                   68999*****6 PP

  == domain 4  score: 15.2 bits;  conditional E-value: 5.5e-06
  Zn_ribbon_17   3 llksCayCelavkgrvvlcgvCeHvlHasCarewfen 39 
                   ++k+C++C  +   ++v c +C+ ++H+sC  +    
    EPX72595.1 789 TKKECNLCGGSNLDNLVECYQCGLIVHKSCQGSKIGA 825
                   679***************************9776555 PP

  == domain 5  score: -4.0 bits;  conditional E-value: 5.4
  Zn_ribbon_17  19 vlcgvCeHvl 28 
                    lc++C  v+
    EPX72595.1 860 WLCESCTFVT 869
                   5788888775 PP

>> PHD_2  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   3.1   6.1e-05      0.14       4      35 ..     260     294 ..     257     295 .. 0.83
   2 ?   -2.7   0.2       2.1   4.7e+03      30      35 ..     646     651 ..     641     652 .. 0.65
   3 ?    2.2   0.3     0.061   1.4e+02       3      12 ..     675     684 ..     673     685 .. 0.84
   4 ?   14.9   0.6   6.5e-06     0.015       3      21 ..     803     821 ..     801     828 .. 0.87
   5 ?    2.1   0.2     0.063   1.4e+02      28      36 .]     858     866 ..     852     866 .. 0.77
   6 ?   -2.0   0.4       1.2   2.7e+03      32      35 ..    1076    1079 ..    1072    1081 .. 0.66

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 6.1e-05
       PHD_2   4 llsCdkCsvaVHasCYG...vskesdgeeWlCrrC 35 
                  ++C+ C+ + H++C     v+k++ g +W+C+ C
  EPX72595.1 260 SVQCADCNKHYHMKCVQpplVKKPPHGFGWTCALC 294
                 699************97555777777777****** PP

  == domain 2  score: -2.7 bits;  conditional E-value: 2.1
       PHD_2  30 WlCrrC 35 
                  +Cr C
  EPX72595.1 646 MVCRNC 651
                 567777 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.061
       PHD_2   3 pllsCdkCsv 12 
                 ++++C kC +
  EPX72595.1 675 LVIYCEKCGI 684
                 689*****87 PP

  == domain 4  score: 14.9 bits;  conditional E-value: 6.5e-06
       PHD_2   3 pllsCdkCsvaVHasCYGv 21 
                  l+ C +C ++VH+sC G 
  EPX72595.1 803 NLVECYQCGLIVHKSCQGS 821
                 699*************886 PP

  == domain 5  score: 2.1 bits;  conditional E-value: 0.063
       PHD_2  28 eeWlCrrCe 36 
                  +WlC+ C+
  EPX72595.1 858 SQWLCESCT 866
                 47******5 PP

  == domain 6  score: -2.0 bits;  conditional E-value: 1.2
       PHD_2   32 CrrC 35  
                  C+rC
  EPX72595.1 1076 CSRC 1079
                  6666 PP

>> C1_1  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   4.9   9.9e-06     0.022       9      44 ..     243     276 ..     238     282 .. 0.91
   2 ?   -1.8   0.2       1.4   3.1e+03      28      36 ..     288     296 ..     285     298 .. 0.85
   3 ?    2.6   0.4     0.057   1.3e+02       6      35 ..     640     683 ..     636     686 .. 0.72
   4 ?   12.8   1.5   3.7e-05     0.082      10      43 ..     789     819 ..     783     822 .. 0.87
   5 ?   -4.1   1.6       7.2   1.6e+04      13      20 ..    1075    1082 ..    1073    1097 .. 0.60

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 9.9e-06
                 SS--B-TTT-SB--SSSS-EEEETTT--EE-CCCCT CS
        C1_1   9 kqptfCkhCgeflwgkekqglkCswCkllvHkkChe 44 
                 ++p  C+ C+e +       ++C++C+  +H kC++
  EPX72595.1 243 ENPRLCNVCKEWC--SLDLSVQCADCNKHYHMKCVQ 276
                 57899********..88889**************86 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 1.4
                 EEEETTT-- CS
        C1_1  28 glkCswCkl 36 
                 g++C+ C++
  EPX72595.1 288 GWTCALCSV 296
                 899**9986 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.057
                 E--SS--B-TTT-SB-..............-SSSS-EEEETTT- CS
        C1_1   6 rnfkqptfCkhCgefl..............wgkekqglkCswCk 35 
                  ++k+p+ C  C++                 +k+k  + C+ C+
  EPX72595.1 640 AKYKKPMVCRNCQSRKstdfyvgpgtdstnLEKNKLVIYCEKCG 683
                 57899999999999876777777777776444666777777776 PP

  == domain 4  score: 12.8 bits;  conditional E-value: 3.7e-05
                 S--B-TTT-SB--SSSS-EEEETTT--EE-CCCC CS
        C1_1  10 qptfCkhCgeflwgkekqglkCswCkllvHkkCh 43 
                  ++ C+ Cg +        + C +C+l+vHk+C 
  EPX72595.1 789 TKKECNLCGGSN---LDNLVECYQCGLIVHKSCQ 819
                 678899999887...7999**************7 PP

  == domain 5  score: -4.1 bits;  conditional E-value: 7.2
                  B-TTT-SB CS
        C1_1   13 fCkhCgef 20  
                  +C+ C   
  EPX72595.1 1075 KCSRCSTT 1082
                  56666544 PP

>> PHD_3  PHD domain of transcriptional enhancer, Asx
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   1.1     0.041        91      35      60 ..     252     277 ..     221     280 .. 0.86
   2 ?   -3.3   0.0       5.5   1.2e+04      43      50 ..     676     683 ..     669     685 .. 0.79
   3 ?    9.0   1.7   0.00082       1.8       9      60 ..     760     821 ..     752     827 .. 0.63

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.041
       PHD_3  35 kCaCrLkamviCkqCGafChDDCiga 60 
                 k  C+L+  v C +C    h  C+ +
  EPX72595.1 252 KEWCSLDLSVQCADCNKHYHMKCVQP 277
                 446********************976 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 5.5
       PHD_3  43 mviCkqCG 50 
                 ++ C++CG
  EPX72595.1 676 VIYCEKCG 683
                 678****9 PP

  == domain 3  score: 9.0 bits;  conditional E-value: 0.00082
       PHD_3   9 vallql..akqsgentPpg.neatata......ankCaC.rLkamviCkqCGafChDDCiga 60 
                 +++lq    k+s + tP+   +  +++      +n C   +L+ +v C qCG   h  C g+
  EPX72595.1 760 TSCLQSplNKNSRNGTPKPkAQVVSSPlntkkeCNLCGGsNLDNLVECYQCGLIVHKSCQGS 821
                 5666652134477777755233322225332334445323699****************764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1111 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       685  (0.0382063); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.72u 0.30s 00:00:01.02 Elapsed: 00:00:00.46
# Mc/sec: 7223.41
//
Query:       EPX72596.1  [L=529]
Description: transcription factor Hsr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.7e-07   31.3  19.3     0.0003   21.1   7.2    3.2  3  zf-C2H2      Zinc finger, C2H2 type
    0.00056   20.2   2.9       0.11   13.0   1.6    3.0  2  zf-met       Zinc-finger of C2H2 type
     0.0077   16.5   9.2       0.02   15.2   4.0    2.5  2  zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
     0.0085   16.9  14.6      0.021   15.6   1.0    3.4  4  zf-C2H2_4    C2H2-type zinc finger
  ------ inclusion threshold ------
       0.14   12.4   4.3      0.049   13.8   1.4    1.7  2  zf-UBR       Putative zinc finger in N-recognin (UBR box)
       0.19   11.7   5.2        4.9    7.3   0.1    2.8  2  zf-C2H2_6    C2H2-type zinc finger
        1.6    9.3  14.5       0.48   10.9   4.0    3.6  3  zf-H2C2_2    Zinc-finger double domain
        2.7    7.7   5.5        4.9    6.9   3.0    2.3  2  zf_C2H2_ZHX  Zinc-fingers and homeoboxes C2H2 finger domain
        8.2    4.8   5.5         10    4.5   5.0    1.4  1  DUF629       Protein of unknown function (DUF629)


Domain annotation for each model (and alignments):
>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       7.3   1.5e+04      11      20 ..     285     294 ..     283     294 .. 0.78
   2 !   21.1   7.2   1.5e-07    0.0003       1      23 []     402     425 ..     402     425 .. 0.96
   3 !   16.4   2.4   4.6e-06    0.0092       6      23 .]     435     452 ..     433     452 .. 0.97

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 7.3
                 SSHHHHHHHH CS
     zf-C2H2  11 krksnLkrHi 20 
                 ++ s L +H+
  EPX72596.1 285 PSYSTLISHL 294
                 6779999996 PP

  == domain 2  score: 21.1 bits;  conditional E-value: 1.5e-07
                 EEETTTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                 + C++C k+Fkr+++L+rHi + H
  EPX72596.1 402 FICHICQKKFKRSEHLRRHIHSlH 425
                 78******************9988 PP

  == domain 3  score: 16.4 bits;  conditional E-value: 4.6e-06
                 TTEEESSHHHHHHHHHCC CS
     zf-C2H2   6 CgksFkrksnLkrHirtH 23 
                 Cgk+F+r++nL++H r+H
  EPX72596.1 435 CGKRFSRRDNLRQHERMH 452
                 *****************9 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   1.6   5.4e-05      0.11       1      22 [.     402     423 ..     402     423 .. 0.93
   2 ?    5.2   0.0     0.015        30       6      21 ..     435     450 ..     434     450 .. 0.93

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 5.4e-05
      zf-met   1 fyCelCnvtfnsesqlksHlqG 22 
                 f C +C+++f+   +l+ H  +
  EPX72596.1 402 FICHICQKKFKRSEHLRRHIHS 423
                 78*****************866 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.015
      zf-met   6 CnvtfnsesqlksHlq 21 
                 C ++f+ + +l++H +
  EPX72596.1 435 CGKRFSRRDNLRQHER 450
                 9*************75 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   4.0     1e-05      0.02       2      23 ..     402     423 ..     401     425 .. 0.94
   2 ?    3.7   0.2     0.039        79       6      22 ..     434     450 ..     433     450 .. 0.93

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1e-05
                  CBBTTTTBBBSSHHHHHCCTTS CS
  zf-C2H2_jaz   2 fYCvlCdKyFksenaldnHlkS 23 
                  f C +C+K Fk ++ l+ H+ S
   EPX72596.1 402 FICHICQKKFKRSEHLRRHIHS 423
                  99*****************988 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.039
                  TTTBBBSSHHHHHCCTT CS
  zf-C2H2_jaz   6 lCdKyFksenaldnHlk 22 
                   C K F+   +l++H++
   EPX72596.1 434 FCGKRFSRRDNLRQHER 450
                  5**************96 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.4   2.2         9   1.8e+04      13      19 ..      56      62 ..      52      64 .. 0.51
   2 ?   -2.9   0.0         9   1.8e+04       9      20 ..     283     294 ..     281     294 .. 0.79
   3 !   14.4   6.6   2.6e-05     0.053       1      24 []     402     425 ..     402     425 .. 0.95
   4 !   15.6   1.0     1e-05     0.021       2      23 ..     432     452 ..     431     453 .. 0.91

  Alignments for each domain:
  == domain 1  score: -5.4 bits;  conditional E-value: 9
   zf-C2H2_4 13 kkaLlrH 19
                +++  +H
  EPX72596.1 56 SSSHHHH 62
                4444555 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 9
   zf-C2H2_4   9 sFsskkaLlrHl 20 
                 s +s+++L +Hl
  EPX72596.1 283 SVPSYSTLISHL 294
                 678999999996 PP

  == domain 3  score: 14.4 bits;  conditional E-value: 2.6e-05
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlkthH 24 
                 f+C+iC+k F+++++L+rH+ + H
  EPX72596.1 402 FICHICQKKFKRSEHLRRHIHSLH 425
                 89*****************99887 PP

  == domain 4  score: 15.6 bits;  conditional E-value: 1e-05
   zf-C2H2_4   2 kCpiCgksFsskkaLlrHlkth 23 
                  C +Cgk+Fs++++L++H ++h
  EPX72596.1 432 AC-FCGKRFSRRDNLRQHERMH 452
                 66.9****************99 PP

>> zf-UBR  Putative zinc finger in N-recognin (UBR box)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.1         9   1.8e+04      28      36 ..      83      90 ..      76      96 .. 0.68
   2 ?   13.8   1.4   2.5e-05     0.049      23      59 ..     403     439 ..     395     446 .. 0.84

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 9
      zf-UBR 28 eeCfkaskH 36
                ++Cf++  H
  EPX72596.1 83 ASCFHHP-H 90
                5677765.5 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 2.5e-05
      zf-UBR  23 tsviCeeCfkaskHeghelvelstkrnggvCdCGdee 59 
                  + iC++ fk+s+H   ++ +l+t+++ + C CG+  
  EPX72596.1 403 ICHICQKKFKRSEHLRRHIHSLHTTDKPFACFCGKRF 439
                 478999999*****77777799*99999******865 PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   1.2      0.01        21       2      13 ..     402     413 ..     401     420 .. 0.82
   2 ?    7.3   0.1    0.0025       4.9       7      24 ..     435     452 ..     434     453 .. 0.92

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.01
   zf-C2H2_6   2 heCsvCsksFps 13 
                 ++C++C k F+ 
  EPX72596.1 402 FICHICQKKFKR 413
                 99********86 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0025
   zf-C2H2_6   7 CsksFpslqaLggHkksH 24 
                 C+k+F+  ++L+ H + H
  EPX72596.1 435 CGKRFSRRDNLRQHERMH 452
                 **************8766 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.3      0.15     3e+02      17      26 .]     404     413 ..     397     413 .. 0.87
   2 ?   10.9   4.0   0.00024      0.48       1      25 [.     416     440 ..     416     441 .. 0.90
   3 ?    1.6   0.2      0.21   4.2e+02       1       9 [.     444     452 ..     444     458 .. 0.89

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.15
   zf-H2C2_2  17 CplCdkaFkt 26 
                 C  C k+Fk+
  EPX72596.1 404 CHICQKKFKR 413
                 99******96 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00024
   zf-H2C2_2   1 nLrrHirk.HtgekpyeCplCdkaFk 25 
                 +LrrHi + Ht +kp+ C +C+k+F+
  EPX72596.1 416 HLRRHIHSlHTTDKPFAC-FCGKRFS 440
                 7*****866*********.9999997 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.21
   zf-H2C2_2   1 nLrrHirkH 9  
                 nLr+H r H
  EPX72596.1 444 NLRQHERMH 452
                 8*******9 PP

>> zf_C2H2_ZHX  Zinc-fingers and homeoboxes C2H2 finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   3.0    0.0024       4.9       3      34 ..     400     431 ..     399     441 .. 0.87
   2 ?    1.2   0.1      0.14   2.8e+02       5      40 ..     431     465 ..     427     471 .. 0.72

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0024
  zf_C2H2_ZHX   3 PsFvCveCsfsakkfegLalHNarsHpgetnf 34 
                  +sF+C  C+   k+ e L  H    H+  + f
   EPX72596.1 400 TSFICHICQKKFKRSEHLRRHIHSLHTTDKPF 431
                  69*******************99999877665 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.14
  zf_C2H2_ZHX   5 FvCveCsfsakkfegLalHNarsHp.getnftlqvvK 40 
                  F C  C+    + ++L +H  r+H+ + t ft +++ 
   EPX72596.1 431 FACF-CGKRFSRRDNLRQH-ERMHAnSGTYFTRSLKN 465
                  6665.899999999*****.57888566666666544 PP

>> DUF629  Protein of unknown function (DUF629)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   5.0    0.0051        10      57      82 ..     402     427 ..     399     435 .. 0.91

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.0051
      DUF629  57 WvCrtCsekfsdaeeckqHlvqeHva 82 
                 ++C++C++kf+ +e+ + H+ + H  
  EPX72596.1 402 FICHICQKKFKRSEHLRRHIHSLHTT 427
                 68********************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (529 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       941  (0.0524848); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 3633.02
//
Query:       EPX72597.1  [L=708]
Description: origin recognition complex subunit Orp3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-32  111.2   0.2    7.9e-32  110.2   0.2    1.6  1  ORC_WH_C  Origin recognition complex winged helix C-terminal
    8.1e-11   41.6  10.9    2.9e-06   26.6   0.1    3.6  4  ORC3_N    Origin recognition complex (ORC) subunit 3 N-termin
  ------ inclusion threshold ------
      0.076   13.0   0.3       0.27   11.3   0.1    2.1  2  DUF1803   Domain of unknown function (DUF1803)


Domain annotation for each model (and alignments):
>> ORC_WH_C  Origin recognition complex winged helix C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.2   0.2   1.3e-35   7.9e-32       1     140 []     546     706 ..     546     706 .. 0.78

  Alignments for each domain:
  == domain 1  score: 110.2 bits;  conditional E-value: 1.3e-35
    ORC_WH_C   1 RaaiesaLaepedylrcaleeee.....eeeeslaslpdtsilyklyleagrliNvyDwyeaFkqvlekereedkeseaeeeekak............. 81 
                 R+ i+s+ ++pe y+  +++e +     +++es++  pd+silykly e+g + N+yDwy+aF+++l+ ++ e++ + +   +k+k             
  EPX72597.1 546 RSVIHSSCMNPEYYIGMQRNEGSskegqSQSESRSWVPDLSILYKLYSESGAFLNLYDWYMAFSENLQVSSTEEQWQMKPGLKKRKvageeepkgesgr 644
                 899***************9544445566899999**********************************6555544444443333335556666666666 PP

    ORC_WH_C  82 ...eeeaekkkkkkekeedeedeeewekelqarFiralheLellGliketgrkadhvaklvw 140
                    e+e+e++ + +++ + +e++  ++ elq+rF+  l+eL++lGlik+t rk+dhv+k+++
  EPX72597.1 645 essESERENEADLEKSIDMDEKASMENVELQSRFLFGLEELRFLGLIKPTTRKTDHVMKTIY 706
                 55444455555555555555666778899*******************************98 PP

>> ORC3_N  Origin recognition complex (ORC) subunit 3 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.2   5.5e-08   0.00033       3     134 ..      24     145 ..      22     150 .. 0.82
   2 !   26.6   0.1   4.8e-10   2.9e-06     201     330 ..     164     294 ..     156     296 .. 0.93
   3 ?    0.3   0.2      0.05     3e+02      17      57 ..     359     399 ..     347     424 .. 0.74
   4 ?   -3.7   0.1      0.82   4.9e+03     170     189 ..     600     619 ..     592     633 .. 0.74

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 5.5e-08
                 XXXXXXXXX..XXXXXXXXX-...-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-..........-----S--EEEEEBTT-GGGCH CS
      ORC3_N   3 kkkrakaedyfksllkdeeks...earfkayqrlWeqikseverlqeelnkkaldslveFvrkqaaervekadetesklesseiptaalllGvNvddhe 98 
                 +k+ ++++d f +l+ ++e     + r + ++++ e++++ v++  +e+n+k++++l+e + k++++              +++ +a+l  G   + h 
  EPX72597.1  24 EKQPLQVDDLFVPLIGNQEPMewvNLRRELCRNVMEELNHIVHQATSESNAKVIQQLTEHALKSTSD-------------GKKLKAAILCDGSRNTFHL 109
                 5666777777777776665555667788888888888888888888888888888888887777766.............57788888888******** PP

                 HHHHHHHHHHHHTTS-EEEEE-CCC-SSCHHHHHHH CS
      ORC3_N  99 etFesLtesLrksvtplvvlLqsrdckalkvalekl 134
                   Fe+L+e+L +  +   v+L  ++c +lk+ ++++
  EPX72597.1 110 RFFEQLKERLYQLGSKRFVVLDLKNCTDLKSCFRQI 145
                 *******************************99987 PP

  == domain 2  score: 26.6 bits;  conditional E-value: 4.8e-10
                 --EEEEES-STTS-HHHHHHHHHHH...HHTCTTC-EEEEEEESS-HHHHHHHS-HHHHCCTTEEEEEB--HHHHHHHHHHHTTT-TTSS-EE-HHHHH CS
      ORC3_N 201 kpvVvileDlEsfdakVLqdfilil...seyvselPlvlvlGvATSvsaihgllPaavssklavelFqslsakshlaavldkvlLtpefpfkLsgkvlq 296
                 + + +il+++E  d + L+ ++++l   s+  +e  + l++ +    +     l a+   +++ e+F +++ +++l+++++  l++++ ++k++ +  +
  EPX72597.1 164 ESITLILQNVEDCDRRLLSALMEALnmiSQKSEEHQVYLIFNLKIPLELFDASLDATFFRHVEPEVFNMKATTEILESMFT--LIDENLSLKFGWRSRK 260
                 67999**************998765444899999*********************************************97..89************** PP

                 HHHHHHHCT---HHHHHHHHHHHHHHHHTT-GGG CS
      ORC3_N 297 vLldiFlehdfSvsafikalklallehFmtqpls 330
                 ++ ++F e  +Sv+ +++ l++ +l+hF+ + ls
  EPX72597.1 261 LFRSMFYERSWSVEKVVNCLRYGILTHFYGNALS 294
                 *****************************98887 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 0.05
                 XXXXXX--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      ORC3_N  17 lkdeeksearfkayqrlWeqikseverlqeelnkkaldslv 57 
                      + e++ +   ++W+++++++er  + +  + ++  +
  EPX72597.1 359 FDGLARRERFLREHVKCWQTLEAHMERSTKVAFGEYMEMFL 399
                 444456689999999***********998888777766555 PP

  == domain 4  score: -3.7 bits;  conditional E-value: 0.82
                 HHHHHHHHHGS.SSHHHHHT CS
      ORC3_N 170 aLkrWYeevtrktserarsk 189
                 +L +WY+  +++++ +++++
  EPX72597.1 600 NLYDWYMAFSENLQVSSTEE 619
                 79999999998888776654 PP

>> DUF1803  Domain of unknown function (DUF1803)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       1.8   1.1e+04       6      30 ..      26      50 ..      23      64 .. 0.75
   2 ?   11.3   0.1   4.5e-05      0.27      18      52 ..     341     375 ..     335     425 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 1.8
     DUF1803  6 nkLtnqplFkeLieyLaehddviLR 30
                + L+ ++lF +Li   +  + v LR
  EPX72597.1 26 QPLQVDDLFVPLIGNQEPMEWVNLR 50
                5678899999999877766777775 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 4.5e-05
     DUF1803  18 ieyLaehddviLRelkkeFadqkkldrlldelida 52 
                 i+ L e+d+v LR +k++F   ++ +r+l e +++
  EPX72597.1 341 IQDLLENDEVFLRYIKSNFDGLARRERFLREHVKC 375
                 5567788************************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (708 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       898  (0.0500865); expected 358.6 (0.02)
Passed bias filter:                      512  (0.0285571); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.64u 0.26s 00:00:00.90 Elapsed: 00:00:00.42
# Mc/sec: 5031.35
//
Query:       EPX72598.1  [L=1047]
Description: metallopeptidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.5e-19   68.3   0.0    2.5e-13   50.5   0.0    2.9  2  Peptidase_M16_C  Peptidase M16 inactive domain
    3.2e-13   49.9   0.0      8e-13   48.6   0.0    1.6  1  Peptidase_M16    Insulinase (Peptidase family M16)
  ------ inclusion threshold ------
      0.076   12.9   0.0       0.95    9.3   0.0    2.4  2  FliM             Flagellar motor switch protein FliM
        0.1   11.9   0.0       0.19   11.0   0.0    1.3  1  Glyco_transf_9   Glycosyltransferase family 9 (heptosyltransf


Domain annotation for each model (and alignments):
>> Peptidase_M16_C  Peptidase M16 inactive domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.5   0.0   5.6e-17   2.5e-13       1     125 [.     195     326 ..     195     386 .. 0.83
   2 !   14.6   0.0   5.4e-06     0.024      29     168 ..     672     906 ..     664     920 .. 0.74

  Alignments for each domain:
  == domain 1  score: 50.5 bits;  conditional E-value: 5.6e-17
                      CH-HHHHHHHHHHHSSGGGEEEEEEESS-HHHHHHHHHHHHTTSTHHSH.......CSGSCTSSSSSGGGSSEEEEEEEESSSSSEEEEEEEEE CS
  Peptidase_M16_C   1 sltredlkefykkfYrpenmvlaivGdvdheelvkliekyfgdlkaska.......ppakptgepltpatlkkppvvlkkldeeqahlslafeg 87 
                      +l+ +++++++k++Y p+n+ l+++G +++e+l++       d+  ++        +p  ++++ ++ ++   + v    +de++ +ls+a+ g
       EPX72598.1 195 KLSIQQIRDYHKSMYVPSNICLVVAGSINEERLLETSSSIVRDIIENDLktpegwvRPWSQKDGNGQIPKSLVKSVNFSSEDESTGSLSIAWNG 288
                      57899****************************************99987777777666666666666666666666666688*********** PP

                      ECTCTHTTHHHHHHHHHHHHSSTTSHHHHHHHTTTTSE CS
  Peptidase_M16_C  88 pskendeddlalavlntlLgggmesrLytnlrekegla 125
                      p + ++++++a++++ + L + + s+L ++  e e ++
       EPX72598.1 289 PTLLDQFKIFAIQTICDFLSESAVSPLKQAFVEIEDPF 326
                      *****************************999766654 PP

  == domain 2  score: 14.6 bits;  conditional E-value: 5.4e-06
                      -HHHHHHHHHHHHTTSTHHSH......................................................................... CS
  Peptidase_M16_C  29 dheelvkliekyfgdlkaska......................................................................... 49 
                      d ++l+++i++++ d+++ k                                                                          
       EPX72598.1 672 DKNRLLSVINQLLADIPYQKRdaecvlpsyidirlyneyslksslntltqekvlrelrqklinnpaevfsffddlrkhllqsmcprvhvvgnil 765
                      6677888888888888888878888888888888888888888888888888888888888888888888888888888888888888888888 PP

                      ..........................CSGSCTSSSSSGGGSSEEEEEEEESSS.SSEEEEEEEEEECTCTHTTHHHHHHHHHHHHSSTTSHHHH CS
  Peptidase_M16_C  50 ..........................ppakptgepltpatlkkppvvlkklde.eqahlslafegpskendeddlalavlntlLgggmesrLyt 116
                                                p +  + + ++++ ++ +   +  ++  e++ l +a +g   +nd+d    ++++++Lg    +++ +
       EPX72598.1 766 qtanaasswtnfvtqilrkkapgsqiPTSFSRLYLQEDEFKSHSSLTVIPMPSnESSDLVVAIPGIKDWNDPDLPIVVLIANYLGLM-DGPFWN 858
                      888888888888877666666555554444444445555555555566666666999999999999999***************976.****** PP

                      HHHTTTTSESEEEEEEEEESSCEEEEEEEEEECTTHHHHHHHHHHHHHHHHH CS
  Peptidase_M16_C 117 nlrekeglaysvsafndsyrdsglfgisatadpenveevvevilkelrklkk 168
                      ++r  +glay+++ + d++   gl++ s+ + ++ v+ +    ++ l+ +++
       EPX72598.1 859 RIR-GSGLAYGFNMGIDIDG--GLLFYSILTSSD-VYRAWSSSKDLLKSIIS 906
                      ***.*************999..888877766655.55555555555555554 PP

>> Peptidase_M16  Insulinase (Peptidase family M16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.6   0.0   1.8e-16     8e-13      25     120 ..      53     143 ..      35     166 .. 0.85

  Alignments for each domain:
  == domain 1  score: 48.6 bits;  conditional E-value: 1.8e-16
                    GSCTTTTTHHHHHHHHTTSBBSSSCH.HHHHHHHHHTTCEEEEEEESSEEEEEEEEEGGG.HHHHHHHHHHHHHSBTTSHHHHHHHHHHHHHHHHH CS
  Peptidase_M16  25 yepkdlnGlAHllehmafkgTkkyps.nklaeeleklGgslnAttsrentvYyvevlskd.lekaldvladvfkaplleesevererkvvekevea 118
                     e  d++G+ H leh+ f+g+kkyp    l++++ +  g +nA+t+ + tvY ++++++d +  +l v+ad +  pll+e+++ +       ev++
     EPX72598.1  53 TEAHDNSGCPHTLEHLCFMGSKKYPMnGILTNFAGRACGDINAYTDVDCTVYELSSAEEDgFLRLLPVFADHVLFPLLSEDAFCT-------EVYH 141
                    58899*********************555567778999*****************999999********************9999.......4444 PP

                    HC CS
  Peptidase_M16 119 vd 120
                    ++
     EPX72598.1 142 IN 143
                    43 PP

>> FliM  Flagellar motor switch protein FliM
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.0   0.00021      0.95      47      92 ..     196     241 ..     192     250 .. 0.91
   2 ?    0.2   0.0      0.14   6.1e+02      30      60 ..     945     975 ..     915     992 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00021
                 EEEEEHHHHHTTSBSS-EEEEEEETTTEEEEEEEE-HHHHHHHHHH CS
        FliM  47 vdqlkyeeflrslpvptslnvirlkplkgtallevdpslvfsivdr 92 
                 +++++  ++ +s++vp+++ ++ +  ++ + lle ++s+v  i+++
  EPX72598.1 196 LSIQQIRDYHKSMYVPSNICLVVAGSINEERLLETSSSIVRDIIEN 241
                 5667788*********************************999987 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.14
                 HHHHHHHTS-EEEEEEEEEEEEHHHHHTTSB CS
        FliM  30 tslsallrkivevsvasvdqlkyeeflrslp 60 
                  s+++l+++   + ++ +  ++ +ef++sl 
  EPX72598.1 945 LSIKNLTKDWDRIFLDRIAAVTINEFMESLK 975
                 68899***********************996 PP

>> Glyco_transf_9  Glycosyltransferase family 9 (heptosyltransferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   4.2e-05      0.19      61     189 ..     354     499 ..     341     499 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 4.2e-05
                     --SHHHHHHHTTS-GGGS-SS---------HHHHHHHHHHTT...............--SSS-EEEEE---TT..GGGS--HHHHHHHHHHHHHT CS
  Glyco_transf_9  61 gqhaVernraLfaqaldlpkpeskpelalslkeraaaldaag...............llaerpyivflpgask..daKrWpeekyaelaealqek 138
                         Ve+ ++L+++ + ++++ +  +l  +++++  al+  +                  +  +  f+ + s+  + K+W e+++  l++    +
      EPX72598.1 354 IDGLVEKVISLLSNLQTIDMKRLHDYLDTQKNQYLTALEVTPrllftkiltldhvygSRDGSDISKFMESLSYneELKKWTEKNWVNLIRSTFIE 448
                     55678999999999999999999999999999999999999999999998888877755555777888888888899*************98777 PP

                     T-EEEE---GGGHHHHHHTTS-HHHHTTEEE-TTTS-HHHHHHHHHTSSEE CS
  Glyco_transf_9 139 gyqvvLfgsaeaeeeeiaeriaagleekavnllgktsLeelaallakadlv 189
                     + ++ +++ ++ e +e++++ +++     vn lgk  Le ++  l+ a+++
      EPX72598.1 449 NNSISVLALPSYEMAERVKQETNKTLSDRVNTLGKEGLETIKHKLDSAKAM 499
                     7788888888886666666655555556*************9999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1047 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       787  (0.0438954); expected 358.6 (0.02)
Passed bias filter:                      549  (0.0306208); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.73u 0.29s 00:00:01.02 Elapsed: 00:00:00.43
# Mc/sec: 7331.10
//
Query:       EPX72599.1  [L=580]
Description: inner membrane protein Mdm31 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   2.1e-160  534.9   1.3   1.6e-127  426.4   0.5    2.0  2  MDM31_MDM32     Yeast mitochondrial distribution and morpholo
  ------ inclusion threshold ------
      0.094   12.8   0.0       0.22   11.6   0.0    1.6  1  LAGLIDADG_WhiA  WhiA LAGLIDADG-like domain


Domain annotation for each model (and alignments):
>> MDM31_MDM32  Yeast mitochondrial distribution and morphology (MDM) proteins
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  426.4   0.5  1.8e-131  1.6e-127      12     364 ..     119     474 ..     115     484 .. 0.93
   2 !  108.1   0.0     5e-35   4.5e-31     403     493 ..     478     568 ..     472     575 .. 0.90

  Alignments for each domain:
  == domain 1  score: 426.4 bits;  conditional E-value: 1.8e-131
  MDM31_MDM32  12 lsrlkirlkwllirsvrpfnaddisafvswlllgnvlwillgtTtfvslvillintvfaqetlakkigdyltkstgvkvvFEsaivpkwkdgkisfkn 109
                  l+r+  r+k +l r+ + +  d+++af+sw l+++++wi+lgtTtf+s++++++n+v++qe+ +k+ig+++tk+tg++vvFEsaivp+w++g i+f++
   EPX72599.1 119 LTRFFSRIKNVLFRQNKFLTLDNVTAFFSWWLVSHLVWIILGTTTFFSILLYTLNSVSTQEYFGKWIGQLMTKNTGFEVVFESAIVPNWRKGLITFNK 216
                  5677789******************************************************************************************* PP

  MDM31_MDM32 110 vfvsrrPkqkkskvekgsskeaaakaaaaaaaeekese....eeeeeeeddgnytqfdltidtvdvtLsfakwlngkGllkdvevkGvrGvvdrthvk 203
                  + v rrP+ +++++ek s +   +++ +a +++ + ++    +e+ +  ++gnytqfdl+id+ dv++sfa++lngkG++k++ ++GvrGvvdr+ v+
   EPX72599.1 217 IQVRRRPEASSTSLEKSSDRPDYEEKYMALRQKFDYESspsvSEDLSVLKQGNYTQFDLSIDKADVSFSFARFLNGKGIVKELVISGVRGVVDRRFVQ 314
                  *******************9999988887777444333345455555689************************************************ PP

  MDM31_MDM32 204 wkeeeldpksyrhehqpgdfelesfkledvlvtvyqpegfrpfkvsifscdlpqLRkqwlfyDflsAnnvsGsfdnslFtiHkrqslekeeeekeeea 301
                   +  + dp+syr +h+ gdfe+e+fkled+ vt+ qp++frpf vs+f c+lp+LRkqwlfyD+++A+n++Gsfdns+Ft+H+ q + ++   k  e+
   EPX72599.1 315 SDL-SIDPRSYRRQHNWGDFEIERFKLEDLRVTLLQPDNFRPFPVSVFFCELPKLRKQWLFYDVMNATNLTGSFDNSMFTVHRLQLKPASPYMKPYEQ 411
                  **9.6********************************************************************************9888888888888 PP

  MDM31_MDM32 302 skwkklsrlridglnidhlnrgvegpfsWiteGkvdivaDimlPededelslskvlseildkl 364
                  s+  ++srlrid+l idhlnrgv+g f+Wi +G vd+  +i  P ++ ++sl++ ++++l + 
   EPX72599.1 412 SPDMRHSRLRIDNLAIDHLNRGVSGAFGWINDGAVDFSVNISCPLEHAQSSLKRYINQVLVNA 474
                  99*********************************************999*****99987554 PP

  == domain 2  score: 108.1 bits;  conditional E-value: 5e-35
  MDM31_MDM32 403 keeeeeekyvvvdlklklndvkAavPlftkdlsyvnnaliRpivayiNskrtyipikcrvvkklsdfdgswtvydsgLmddlsaevYeala 493
                  +++e +   v  d++++l++ kAa+P+ft+++ yvnnal+RpivayiNs rt+ipi c++ k lsdfdgswt ydsg+++++s++v   l 
   EPX72599.1 478 EKKEYPVPDVYFDVDVQLHNPKAAIPIFTNQMGYVNNALLRPIVAYINSTRTFIPIMCHLSKPLSDFDGSWTFYDSGVLQEISSQVSMTLF 568
                  455666678999************************************************************************9976665 PP

>> LAGLIDADG_WhiA  WhiA LAGLIDADG-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   2.5e-05      0.22       6      57 ..     432     483 ..     428     489 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2.5e-05
  LAGLIDADG_WhiA   6 rGaflasGsindpekkyhLEivspdeelaeqlqkllnefeleakilerrkky 57 
                     rG+  a G ind + ++   i++p e + + l+ ++n++ ++ak++e++++ 
      EPX72599.1 432 RGVSGAFGWINDGAVDFSVNISCPLEHAQSSLKRYINQVLVNAKLTEKKEYP 483
                     7777788*****9999*******************************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (580 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       466  (0.0259914); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.42
# Mc/sec: 4127.96
//
Query:       EPX72600.1  [L=143]
Description: transcriptional regulator [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.1e-23   81.9   0.8    6.4e-23   81.2   0.3    1.5  2  HCNGP     HCNGP-like protein
  ------ inclusion threshold ------
      0.014   15.0   0.0      0.018   14.7   0.0    1.3  1  IcmF_C    Type VI secretion protein IcmF C-terminal


Domain annotation for each model (and alignments):
>> HCNGP  HCNGP-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.73   6.5e+03      64      77 ..      21      34 ..      19      35 .. 0.81
   2 !   81.2   0.3   7.1e-27   6.4e-23       2      93 ..      35     127 ..      34     128 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.73
       HCNGP 64 kevwdphgfpeeay 77
                +++w p++++++ +
  EPX72600.1 21 ESLWAPSEMNNWRF 34
                57899999999875 PP

  == domain 2  score: 81.2 bits;  conditional E-value: 7.1e-27
       HCNGP   2 PpsppskcdpelqaKiekflklkkegvhfnerlassksfrNPsilekLvefvgide.ygtnlpkevwdphgfpeeayydalakaqkkerekre 93 
                 P+sp++  d  l++Ki++fl+lk+++vhf++rl ++++f NP++l++L e++gi++ +++++p+  w p+ +p++ay+++l++aq++  +kre
  EPX72600.1  35 PSSPKGDSDSFLEKKIKQFLELKRKNVHFHARLVENENFLNPQLLDTLQEYAGISNpMASMMPSATWIPQCLPNSAYAKSLREAQEDLIRKRE 127
                 999999999*********************************************766*******************************99998 PP

>> IcmF_C  Type VI secretion protein IcmF C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0     2e-06     0.018      64     118 ..      38      93 ..      34     138 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 2e-06
      IcmF_C  64 pgGlldkFfqkqLapfvdtsgntwrprqendkglgl.spaflkqfqraarirdalf 118
                 p+G  d+F++k++++f++ ++++  + +   ++ ++ +p++l+ +q++a i++ + 
  EPX72600.1  38 PKGDSDSFLEKKIKQFLELKRKNVHFHARLVENENFlNPQLLDTLQEYAGISNPMA 93 
                 88999****************9999998888655655************9998654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       754  (0.0420548); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 1105.81
//
Query:       EPX72601.1  [L=457]
Description: CAA Xprenyl protease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.6e-51  173.0   9.5    1.1e-50  172.1   9.5    1.4  1  Peptidase_M48_N  CAAX prenyl protease N-terminal, five membra
      2e-49  168.1   0.0    3.9e-49  167.1   0.0    1.5  1  Peptidase_M48    Peptidase family M48
  ------ inclusion threshold ------
      0.078   12.8   0.4       0.26   11.1   0.6    1.8  2  SprT-like        SprT-like family
       0.22   12.1   3.6        0.8   10.3   3.6    2.0  1  DUF1240          Protein of unknown function (DUF1240)


Domain annotation for each model (and alignments):
>> Peptidase_M48_N  CAAX prenyl protease N-terminal, five membrane helices
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  172.1   9.5   2.4e-54   1.1e-50       7     182 .]      59     242 ..      53     242 .. 0.96

  Alignments for each domain:
  == domain 1  score: 172.1 bits;  conditional E-value: 2.4e-54
  Peptidase_M48_N   7 etkkvPeeladaitkekfdksraYgldksrfglvsslyslilllallllgllpflwklsgkl.........lgldaeseilqslvfllllslis 91 
                      +  ++P+ la++++++k++k+ aY++dks ++ ++s++ l+ +l+l+ +++l +lw+l++ +          +++ +  i +s+vfl++l+++s
       EPX72601.1  59 KD-SPPAVLAEHVDDKKYQKALAYARDKSFLSTITSTFALVTDLLLIKFNGLSYLWNLTKFAwmdrlaasaSKFSLSVPISHSCVFLFALTVFS 151
                      33.39******************************************************9999***999876778899**************** PP

  Peptidase_M48_N  92 tlislPfslYstFviEekhGfnkqtlklfikdklkslllalviglpllaallwiiewggeyfylylwlfllvfslllmtiyPtlIaPLFnK 182
                      +li+lPfslYstF iEek+Gfnk+tlk+f++d++k+l ++ v++  l++++++i +++g++f+ly+w+  ++f l+l+ i P lI+PLF K
       EPX72601.1 152 SLIQLPFSLYSTFGIEEKYGFNKSTLKIFFMDLFKELTIGGVLMSFLVSIFVKITTKFGDNFVLYAWGAYIMFGLVLQSIAPSLIMPLFYK 242
                      *****************************************************************************************98 PP

>> Peptidase_M48  Peptidase family M48
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  167.1   0.0   8.6e-53   3.9e-49       1     196 []     245     452 ..     245     452 .. 0.97

  Alignments for each domain:
  == domain 1  score: 167.1 bits;  conditional E-value: 8.6e-53
                    E--SSHHHHHHHHHHHHTT-..-EEEEEEE-GGGT....-EEEEESSS-EEEEEEHHHH-SSB-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_M48   1 plreaelkevveelakeaglpkpltkvyvvnspkr....NAFalgggknkrivltdgLlkqllseeelaaVlGHElGHikhrhsvvslivsllasi 92 
                    pl++++l++++e+la+++++  pl+k+yv+++++r    NAF++g  +nk ivl+d+L+ ++++eeel+a+lGHElGH+   h+++ ++v + +s+
     EPX72601.1 245 PLEQGSLRSKIEDLAASIKF--PLKKLYVIDASRRsahsNAFFYGLPWNKGIVLFDTLV-KNHTEEELLAILGHELGHWYLSHNMIHTLVDYSMSL 337
                    6899****************..***********99************************.************************************ PP

                    HHHHHHHHHTT-SHHHHHTT--S---HHHHHHHHHHTT.............HHHHHHHHHHHHHHHHTTT.HHHHHHHHHHHHHHTT--S---HHH CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_M48  93 llllglallisraeedaagafldalavliglliillfl.............alSRkrEyqADeagvellkrakdlvraliklakdlerqdvsaslr 175
                    ++l+++a+++++ ++  a+ f+++++v+igll + + +             ++SR +EyqAD+++++l+  akdl + li++++d+++  +++ l+
     EPX72601.1 338 AQLFLFAAFLRNDSLYEAFDFTKEKPVIIGLLLF-SDAlgpvsslltygsnKISRFCEYQADAFAKKLGL-AKDLGDGLIRIHNDNLSPLEYDPLY 431
                    ******************************8864.5556*******************************.************************* PP

                    HHHS-SS--HHHHHHHHHH-X CS
                    xxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_M48 176 sellstHPplleRiqalkele 196
                    + ++++HP+l++R++a++++e
     EPX72601.1 432 TSYHHSHPILTDRLAAIDYME 452
                    *****************9985 PP

>> SprT-like  SprT-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       2.6   1.2e+04      22      46 ..     117     140 ..     115     151 .. 0.71
   2 ?   11.1   0.6   5.8e-05      0.26      48      77 ..     293     322 ..     287     333 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 2.6
   SprT-like  22 kiiwskrlnttaGranlkratvrhh 46 
                 k+ w +rl  +a + +l+  + +h+
  EPX72601.1 117 KFAWMDRLAASASKFSLSV-PISHS 140
                 6788888888887776665.55555 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 5.8e-05
   SprT-like  48 sIeLseklldsrsedrllntLaHElcHlal 77 
                  I L  +l+++++e++ll +L HEl H +l
  EPX72601.1 293 GIVLFDTLVKNHTEEELLAILGHELGHWYL 322
                 699999*********************998 PP

>> DUF1240  Protein of unknown function (DUF1240)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   3.6   0.00018       0.8       4      67 ..     144     206 ..     141     215 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00018
     DUF1240   4 tFsskvvlllfssPlllYfsvlvvlvaitnklakvndklvkllaiiailsfvlslflslYvdyk 67 
                 +F+ +v+  l++ P+ lY +  +   + +nk + ++  +++l+  ++i ++++s+ +s++v+  
  EPX72601.1 144 LFALTVFSSLIQLPFSLYSTFGIEEKYGFNKST-LKIFFMDLFKELTIGGVLMSFLVSIFVKIT 206
                 6999999***********999998888888876.8899***********************876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (457 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       462  (0.0257683); expected 358.6 (0.02)
Passed bias filter:                      287  (0.0160076); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.23s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 3107.04
//
Query:       EPX72602.1  [L=317]
Description: arginase Car3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.2e-73  246.0   0.0    5.9e-73  245.8   0.0    1.0  1  Arginase  Arginase family


Domain annotation for each model (and alignments):
>> Arginase  Arginase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  245.8   0.0   3.3e-77   5.9e-73       2     275 ..      17     309 ..      16     313 .. 0.88

  Alignments for each domain:
  == domain 1  score: 245.8 bits;  conditional E-value: 3.3e-77
                 EEEEEEEE--TTTSSSGGGGGHHHHHHHHHHTSBT.HCHEETTTTESCCSEEEEEEEEE--.......SSCHHHHHHHHHHHHHHHHHTTCEEEEEESS CS
    Arginase   2 dvallGvPfdaagsgrpGarfGPraireasarlee.aleynlelgvleelkivdlgdvavt.......pvdneevleqieeavaeilkagklpivlGGD 92 
                 +v+++  Pf++ g+ ++G++ +P+ i +a  + +  +l+y+++    ++ ++    +++ +       p+  ++v++q+ ++v++ l++++l++ +GGD
  EPX72602.1  17 QVSIINLPFSG-GQPKKGTEDAPELIEKAGIQSDLeNLGYSVRYI--QNPSFKTPPQIEGPskdiiknPQYVSDVCRQVRDTVKQELSQQRLVVNVGGD 112
                 689********.*****************9999966788888655..4444444444444455643334445556************************ PP

                 GGGHHHHHHHHHHHHSTTEEEEEESSS----SSCTTTBSSSTTSHHHH............HHHHTSECGCEEEEEEE-STCSHHHHHHHHTTSEEEEHH CS
    Arginase  93 HsialgilralaekygkplgvihfDAHaDlrtpetegsgnshGtpfrr............aaeegllkpkklvqiGirsvdneeyelakelgirvitmr 179
                 Hs+ +g++++++ +y+ +++v+++DAHaD++tpe+++s+n hG+p+++            a++++++++k+l++iG+r+ d++e+ +++e++i ++tm+
  EPX72602.1 113 HSLGMGTIEGVQSVYD-DACVLWIDAHADINTPESSPSKNLHGCPLAFslgyvdpvppefAWTKRVIDEKRLAFIGLRDLDPQERAFLREHNIAAFTMH 210
                 **************98.6******************************************7779*********************************** PP

                 HHHHHHHHHHHHHHHHHHTC.TTSEEEEEEEGGGBBTTTSTSSSS-BSS-B-HHHHHHHHHHHHCHSEEEEEEEE-B-GGGSSTT..THHHHHHHHHHH CS
    Arginase 180 eidelglkavveeilervga.eedpvylSfDiDvlDpavaPGtGtpepgGltlrellallrelaeklnlvgaDvvEvnPaldtea..eqtarlaarlvr 275
                 ++d++g+++v+e++le+++  + +pv+lSfD+D  DpavaP+tGt +pgGlt+re+++l+++ ae+ +lv++Dv+EvnP l +e+  e t++la +++r
  EPX72602.1 211 HVDKYGISKVIEMALEHINPgNRHPVHLSFDVDSCDPAVAPSTGTRVPGGLTFREAMYLCEATAETSTLVAIDVMEVNPRLGNEEdsEATVNLARSIIR 309
                 ******************443778**************************************9999***************995544556666655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (317 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       437  (0.0243739); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2301.23
//
Query:       EPX72603.1  [L=214]
Description: DUF1640 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.4e-31  109.1   9.9    3.3e-31  108.7   9.9    1.0  1  DUF1640    Protein of unknown function (DUF1640)
     0.0046   16.6   1.4       0.28   10.8   1.3    2.2  2  DUF3961    Domain of unknown function (DUF3961)
  ------ inclusion threshold ------
       0.14   12.9   8.7       0.75   10.5   3.1    2.3  2  DUF2203    Uncharacterized conserved protein (DUF2203)
       0.32   11.6   2.5       0.73   10.5   2.5    1.6  1  DUF883     Bacterial protein of unknown function (DUF883)
       0.48   10.5  11.5        1.6    8.8  11.4    2.0  1  ApoLp-III  Apolipophorin-III precursor (apoLp-III)
        2.8    8.4   9.5        4.5    7.7   2.2    2.8  3  FlaC_arch  Flagella accessory protein C (FlaC)


Domain annotation for each model (and alignments):
>> DUF1640  Protein of unknown function (DUF1640)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.7   9.9   1.1e-34   3.3e-31       8     169 ..      47     208 ..      43     212 .. 0.97

  Alignments for each domain:
  == domain 1  score: 108.7 bits;  conditional E-value: 1.1e-34
     DUF1640   8 rrLeekGftkeqAeaimsaltevlneslekvakslvskselekseylqkaalselrkevqisersefaalrseteklqreleklkqkLreeidklkadi 106
                 +rL + G+t+++A+a +++++++++e l++++k++  k+++++ + +qk  + ++r+ +++ e++ef ++r+++++l +e+ek+k+++r++++   a++
  EPX72603.1  47 SRLMQVGYTPDKAKAFTNLMQRITAEALTELEKNIGLKAKQDSVSFQQKKTFIQIRNYLETIEEQEFDKIRQSSQSLVQEVEKMKSSVRDDVKSSLAEV 145
                 6999*********************************************************************************************** PP

     DUF1640 107 rldlnleKgrireelakleakiqelnnkidrevsalrteiEsvKldvikyliglvvgilavgl 169
                 rl lnleKgr+++   + ++++q++++ki +ev+ l  ei s+K+++ ++++g++  ++ v++
  EPX72603.1 146 RLALNLEKGRMKDAGLRKNNSVQDTEEKIIKEVELLADEIKSMKIQTNQWFMGFLGILSSVLI 208
                 ******************************************************988887765 PP

>> DUF3961  Domain of unknown function (DUF3961)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0      0.02        60       5      18 ..      79      92 ..      76      93 .. 0.84
   2 !   10.8   1.3   9.5e-05      0.28      16      34 ..     194     212 ..     189     213 .. 0.90

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.02
     DUF3961  5 kFFGLeTKeDrvWF 18
                k  GL+ K+D v F
  EPX72603.1 79 KNIGLKAKQDSVSF 92
                668*******9977 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 9.5e-05
     DUF3961  16 vWFYGFYGiAvSiVLFmVF 34 
                  WF GF Gi  S+ +F+ F
  EPX72603.1 194 QWFMGFLGILSSVLIFILF 212
                 5***************998 PP

>> DUF2203  Uncharacterized conserved protein (DUF2203)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   3.1   0.00025      0.75       3      78 ..      54     136 ..      52     144 .. 0.71
   2 ?    5.8   0.3    0.0074        22      35      82 ..     148     198 ..     136     206 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00025
     DUF2203   3 FtleeAnalLpllkelleelralrkeleeleeeleeakaeaekse.........aaeleaeleeleaeieelveeieelGvevkd 78 
                 +t ++A+a   l++++++e+ +  ++   l+++ ++ + +++  +         ++ +e+e+++++++ ++lv+e+e+++  v+d
  EPX72603.1  54 YTPDKAKAFTNLMQRITAEALTELEKNIGLKAKQDSVSFQQK--KtfiqirnylETIEEQEFDKIRQSSQSLVQEVEKMKSSVRD 136
                 788999999999999998887444443333332222222211..1234567799999***********************99998 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0074
     DUF2203  35 eleeakaeaekse...aaeleaeleeleaeieelveeieelGvevkdleag 82 
                 +l+ +k +++  +    ++ + ++e++ +e+e l +ei++++++  +  +g
  EPX72603.1 148 ALNLEKGRMKDAGlrkNNSVQDTEEKIIKEVELLADEIKSMKIQTNQWFMG 198
                 444444443333355589999999******************998776555 PP

>> DUF883  Bacterial protein of unknown function (DUF883)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   2.5   0.00024      0.73       2      66 ..     115     179 ..     114     192 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00024
      DUF883   2 eleaeleslladleellkeaadeageeaeelRerleerlerarerlrdaeeavaerakeaaeaad 66 
                 ++++  +sl++++e++ ++  d+ +++++e+R  l+ +  r++++  + +++v++  ++++++++
  EPX72603.1 115 KIRQSSQSLVQEVEKMKSSVRDDVKSSLAEVRLALNLEKGRMKDAGLRKNNSVQDTEEKIIKEVE 179
                 678899**************************************999999999998888877765 PP

>> ApoLp-III  Apolipophorin-III precursor (apoLp-III)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8  11.4   0.00054       1.6      28     119 ..     106     194 ..      67     201 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00054
   ApoLp-III  28 KensenlvdqlkqvikslqeelkkksdeleealkevkkkieetadklseenPevkkkaqelqekvQsgvqslvkesqklaeslkensqeake 119
                  +  e+  d+++q ++sl +e+ k      ++ ++vk+ ++e++  l+ e+  +k +    +++vQ+  ++++ke++ la ++k+ + ++++
  EPX72603.1 106 ETIEEQEFDKIRQSSQSLVQEVEKMK---SSVRDDVKSSLAEVRLALNLEKGRMKDAGLRKNNSVQDTEEKIIKEVELLADEIKSMKIQTNQ 194
                 33345556788888888888888866...578899*************************************************98887775 PP

>> FlaC_arch  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1      0.65   1.9e+03      19      35 ..      94     110 ..      74     111 .. 0.65
   2 ?    7.7   2.2    0.0015       4.5       9      39 ..     105     136 ..      99     139 .. 0.84
   3 ?    4.2   0.5     0.019        56      17      39 ..     165     187 ..     151     189 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.65
   FlaC_arch  19 vkkeneelsksveelke 35 
                  kk++ ++++ +e+++e
  EPX72603.1  94 QKKTFIQIRNYLETIEE 110
                 45667788888888876 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.0015
   FlaC_arch   9 lsklst.eletvkkeneelsksveelkenVkd 39 
                 l+ ++  e++ ++++ ++l ++ve++k +V+d
  EPX72603.1 105 LETIEEqEFDKIRQSSQSLVQEVEKMKSSVRD 136
                 5566556999********************87 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.019
   FlaC_arch  17 etvkkeneelsksveelkenVkd 39 
                 ++v+++ e++ k+ve l +++k 
  EPX72603.1 165 NSVQDTEEKIIKEVELLADEIKS 187
                 799****************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1783  (0.0994478); expected 358.6 (0.02)
Passed bias filter:                      538  (0.0300073); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.53u 0.28s 00:00:00.81 Elapsed: 00:00:00.47
# Mc/sec: 1359.01
//
Query:       EPX72604.1  [L=662]
Description: vacuolar amino acid efflux transporter Avt3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-90  303.1  39.8      3e-90  302.9  39.8    1.0  1  Aa_trans  Transmembrane amino acid transporter protein


Domain annotation for each model (and alignments):
>> Aa_trans  Transmembrane amino acid transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  302.9  39.8   1.7e-94     3e-90       3     408 ..     281     661 ..     279     662 .] 0.97

  Alignments for each domain:
  == domain 1  score: 302.9 bits;  conditional E-value: 1.7e-94
    Aa_trans   3 ssalsavlnlikaivGaGvLaLPyAfkqlGlivGlillllvallslytlllLvkcsktlasgkrnksYgdlgyrllGpkgkliidlailvqlfGvgvsy 101
                 +s  +avl l+k++vG+GvL+LP Af  +Gl+++ i+ll+v+lls++++llL++++ + +      s+gd+g  l+Gpk++l+i  +i+++++G++++y
  EPX72604.1 281 ASNGKAVLLLLKSFVGTGVLFLPKAFLLGGLVFSSICLLVVGLLSHICFLLLIETRSKIP-----GSFGDIGGTLYGPKMRLAILTSIVISQIGFASAY 374
                 7889****************************************************9665.....9********************************* PP

    Aa_trans 102 liligdllpaifesffdt.lllsnvyfilisaliiipLslipnlskLsylSllalvsslyyivilvlvvaelvklelkgvseetvkkasklkglflaig 199
                 + +++++l+a+++ ++ + ++++ ++fi+ ++l+++pLs+++++skLs ++l+a+ ++l+   il+l+ ++  +l  kg+++  +   ++ ++++l+ig
  EPX72604.1 375 ISFVASTLQACVRAVLAShKEYHVAVFIFLQFLVFVPLSMVRKISKLSATALIADAFILL--GILYLYFWDVFTLATKGIADVVL---FNRTDFSLFIG 468
                 **************99776999************************************96..6********************98...8888******* PP

    Aa_trans 200 iivFAftghavlleiqnelkdpskfkkmtkvlllsiilatvlyilvGlvGYltFGnevkgnillnlpkssilivivnlllvlhlilsfplqlhplrqvv 298
                 +++F+++g++++l+iq+++ +p++ +   kvl+ +++++ +l+i++G+v Y++FG++v+++++ln+p+ss ++v++++l++++++ls+plql+p+++++
  EPX72604.1 469 VAIFTYEGICLILPIQEQMAKPKNLP---KVLSGVMLAISLLFISIGVVSYAAFGSKVQTVVILNMPQSS-FTVVIQFLYAVAILLSTPLQLFPAIAII 563
                 ************************99...9***************************************9.**************************** PP

    Aa_trans 299 enllikkeavagasekeapkskllrlvirlllvvityliA.lsvpslakvlslvGatsstplsfilPalfhlkliktekksleklvkkkildlicivlg 396
                 e+ ++++      s+k+++k+k++++++r+++v++++l++ +  + l++++s+vG+++++pl++++P+++h+k++ t++       k ++ld++++v+g
  EPX72604.1 564 EQGIFTR------SGKRNRKVKWRKNTLRVFIVMFSILVSwAGSSRLDQFVSMVGSLCCIPLIYMYPPMLHYKACATTW-------KLRALDITMFVIG 649
                 *****98......***************************99***********************************95.......445789******* PP

    Aa_trans 397 lllvfyglavli 408
                 ++ ++++ ++++
  EPX72604.1 650 FVSMIFTAYMTL 661
                 ******999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (662 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1043  (0.0581739); expected 358.6 (0.02)
Passed bias filter:                      516  (0.0287802); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.33s 00:00:01.02 Elapsed: 00:00:00.49
# Mc/sec: 4080.34
//
Query:       EPX72605.1  [L=415]
Description: phytochelatin synthetase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.2e-85  285.2   0.0    3.3e-85  284.6   0.0    1.3  1  Phytochelatin  Phytochelatin synthase
  ------ inclusion threshold ------
       0.13   12.5   0.1        3.5    7.9   0.0    2.3  2  YlbD_coat      Putative coat protein


Domain annotation for each model (and alignments):
>> Phytochelatin  Phytochelatin synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  284.6   0.0   3.7e-89   3.3e-85       1     212 [.      43     251 ..      43     252 .. 0.99

  Alignments for each domain:
  == domain 1  score: 284.6 bits;  conditional E-value: 3.7e-89
                    XXXXX--TTEEESSSHHHHHHHHT-SB-...TTHHHHHHH----SSCCGHHHHHHHHHHHHHT-----TTTTT-----TTTCCGSHS-HHHHHHH- CS
  Phytochelatin   1 fykrelpekliafsseeGkkllkealaegtaedyfpLaeqfetqsepayCGlaslvmvLnaLevdpkrkwkgpwrwfteellldcciklekvkkeG 96 
                    fykr+lp++++af+s++Gk+++ +al+eg++e+yf+La+q++tq+epa+CG+++l+m+Ln+L+vdp+r wkg wrw+++++l dcc++l++++++G
     EPX72605.1  43 FYKRTLPPQCLAFDSHQGKQVFLKALQEGHMENYFTLAQQMVTQNEPAFCGIGTLCMILNSLKVDPGRLWKGSWRWYDQDML-DCCRSLKDIERDG 137
                    799*******************************************************************************.************* PP

                    --HHHHHHHHHTTT-EEEEEEGGGS-HHHHHHHHHHHCTSTT..EEEEEEEEGGGGTSSSSEEEEEEEEEETTTTEEEE--S-TTT---EEEEHHH CS
  Phytochelatin  97 itleelaelakcnglkvevvraselsleefrklvkevlkseeedkfvvvnysRkalgqtgeGHfSPigaYdeesdsvLiLDvarfkYppvWvklee 192
                    itlee+++la+cngl++ + + +++s+eef k++  +++++   k++ +++sRk+lgqtg+GHfSP+g+Y+e++ +vLiLDvarfkYp++Wv+le 
     EPX72605.1 138 ITLEEFSCLANCNGLQTVTKSVKDVSFEEFLKDLMICSTQTG--KIMAISFSRKVLGQTGDGHFSPVGGYSEKDGKVLILDVARFKYPSYWVDLEM 231
                    **************************************9966..**************************************************** PP

                    HHHHHSSEETTTTEE-EEEE CS
  Phytochelatin 193 LyeamktlDkatgksRGyvl 212
                    +y++m +lD++++++RGyvl
     EPX72605.1 232 MYKSMFPLDATNNQPRGYVL 251
                    ******************98 PP

>> YlbD_coat  Putative coat protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.1     0.025   2.3e+02      77     111 ..     267     301 ..     256     321 .. 0.79
   2 ?    7.9   0.0   0.00039       3.5      65     101 ..     363     399 ..     352     409 .. 0.85

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.025
   YlbD_coat  77 kkldvdklqehlnqlskalasvqelikqfqekkqk 111
                 +k   +++++h+++  ++ +svq+li+   + +q+
  EPX72605.1 267 NKYSWKNVSNHIHHEVTSAKSVQDLINRLDSLNQS 301
                 6777889999**9999999******9998887777 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.00039
   YlbD_coat  65 kkdllsqllnllkkldvdklqehlnqlskalasvqel 101
                 +  ll+ql+ +lk++d++++q ++  l + l+s+ + 
  EPX72605.1 363 NPALLDQLIPYLKEIDINEIQTQVRVLIEQLESLTQC 399
                 556799*****************99999998888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (415 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       931  (0.051927); expected 358.6 (0.02)
Passed bias filter:                      603  (0.0336327); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.31s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 2766.58
//
Query:       EPX72606.1  [L=101]
Description: hypothetical protein SOCG_00369 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-21   77.3  10.5    1.4e-21   77.1  10.5    1.0  1  Tmemb_14  Transmembrane proteins 14C
  ------ inclusion threshold ------
       0.09   12.9   0.6        1.7    8.8   0.0    2.3  2  QCR10     Ubiquinol-cytochrome-c reductase complex subunit (Q


Domain annotation for each model (and alignments):
>> Tmemb_14  Transmembrane proteins 14C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.1  10.5   1.5e-25   1.4e-21       2      92 .]       6      96 ..       5      96 .. 0.98

  Alignments for each domain:
  == domain 1  score: 77.1 bits;  conditional E-value: 1.5e-25
    Tmemb_14  2 laiaygallavGGilgYlkagSvpSLiaGlllGallllagyllsknkka.kelslvislvlllvmgkrllktrkfmpaglvavlsalmllfy 92
                +a+++g+ll++GG+ gY+ +gS++SLiaG++lG+++l++  l+s+n++  + l+l+ s++l+++ ++rl+ktrk++p +l+ vl+a+++++y
  EPX72606.1  6 IALVLGGLLSLGGAKGYFSKGSKASLIAGVGLGGVYLYSSRLMSQNSTSgVPLALAGSAFLFASGVPRLAKTRKPVPLMLT-VLGAVSTAYY 96
                57899****************************************************************************.********98 PP

>> QCR10  Ubiquinol-cytochrome-c reductase complex subunit (QCR10)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.2     0.021   1.9e+02       9      32 ..      22      45 ..      16      47 .. 0.85
   2 ?    8.8   0.0   0.00019       1.7      22      39 ..      59      76 ..      50      78 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.021
       QCR10  9 ltrygptlalfGgaagvavlffts 32
                 ++ g+++ l +g+ + +v ++ s
  EPX72606.1 22 YFSKGSKASLIAGVGLGGVYLYSS 45
                567899*************99976 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00019
       QCR10 22 aagvavlfftsgvPrvqk 39
                a +  +++f+sgvPr  k
  EPX72606.1 59 ALAGSAFLFASGVPRLAK 76
                667889*********865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       404  (0.0225333); expected 358.6 (0.02)
Passed bias filter:                      270  (0.0150594); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 756.49
//
Query:       EPX72607.1  [L=339]
Description: metallopeptidase Oma1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.9e-35  122.4   0.0    3.3e-35  121.7   0.0    1.3  1  Peptidase_M48  Peptidase family M48


Domain annotation for each model (and alignments):
>> Peptidase_M48  Peptidase family M48
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.7   0.0   1.8e-39   3.3e-35       6     195 ..     136     310 ..     132     311 .. 0.90

  Alignments for each domain:
  == domain 1  score: 121.7 bits;  conditional E-value: 1.8e-39
                    HHHHHHHHHHHHTT-..-EEEEEEE-GGGT-EEEEESSS-EEEEEEHHHH-SSB-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHH CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_M48   6 elkevveelakeaglpkpltkvyvvnspkrNAFalgggknkrivltdgLlkqllseeelaaVlGHElGHikhrhsvvslivsllasillllglall 101
                    ++ +v++++++ +g+++ ++++ v+++p++NAF+l+gg   ++++++g+l  + +e+ laaVlGHE++H ++rhs +++ ++   +++++l++a  
     EPX72607.1 136 YVSRVLKRIIAVSGISDLKWELHVIRDPSANAFVLPGG---KVFVFEGILPICQNEDGLAAVLGHETAHQVARHSSEKIAFTRAITFVFYLLAA-- 226
                    7899**********************************...***************************************99999999999996.. PP

                    TT-SHHHHHTT--S---HHHHHHHHHHTTHHHHHHHHHHHHHHHHTTT.HHHHHHHHHHHHHHTT--S---HHHHHHS-SS--HHHHHHHHHH- CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_M48 102 israeedaagafldalavliglliillflalSRkrEyqADeagvellkrakdlvraliklakdlerqdvsaslrsellstHPplleRiqalkel 195
                        ++d +g+ +  l   +gll     l++SRk+E +AD +g+ l+++a+ +++a+ +++++++ ++ s     ++ stHP++++Ri++++e+
     EPX72607.1 227 ----SLDLSGQLA-HLLLNFGLL-----LPFSRKMEGEADYIGLMLMSQACFNPEAAKSMWERMAAAESSMGSTLAFASTHPSSEKRIRKIQEW 310
                    ....444444443.333344433.....39******************************************999****************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (339 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       585  (0.0326287); expected 358.6 (0.02)
Passed bias filter:                      515  (0.0287244); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.38
# Mc/sec: 2644.18
//
Query:       EPX72608.1  [L=238]
Description: SNARE Bos1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.7e-16   60.2   0.6    3.9e-16   59.1   0.6    1.6  1  V-SNARE_C  Snare region anchored in the vesicle membrane C-te
      5e-07   29.6   0.2    1.8e-06   27.8   0.1    1.9  2  Sec20      Sec20
  ------ inclusion threshold ------
      0.018   13.7   1.2      0.026   13.2   1.2    1.2  1  AAA_13     AAA domain
      0.021   14.9   0.0      0.039   14.1   0.0    1.5  1  HTH_AraC   Bacterial regulatory helix-turn-helix proteins, Ar
      0.071   13.0   1.7       0.11   12.4   1.7    1.3  1  PriC       Primosomal replication protein priC
        0.1   12.4   0.0       0.21   11.4   0.0    1.6  1  HTH_8      Bacterial regulatory protein, Fis family


Domain annotation for each model (and alignments):
>> V-SNARE_C  Snare region anchored in the vesicle membrane C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.1   0.6   1.3e-19   3.9e-16       1      65 [.     147     211 ..     147     212 .. 0.98

  Alignments for each domain:
  == domain 1  score: 59.1 bits;  conditional E-value: 1.3e-19
   V-SNARE_C   1 erllresdrlknShrivdetisiGaailedLhsQretLkrarsklhnvanrlgksnsiLrsikrR 65 
                 e ll e+d l ++++++de +++G   l+dL++Q+  Lk++++k+++van+lg+s+++L++i+rR
  EPX72608.1 147 EGLLHENDFLGRAESQIDEYLERGRLLLGDLVEQKTILKSTKKKVLDVANTLGISRTTLSAINRR 211
                 67999***********************************************************9 PP

>> Sec20  Sec20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       1.9   5.5e+03      35      48 ..      10      23 ..       4      38 .. 0.56
   2 !   27.8   0.1   5.9e-10   1.8e-06      14      90 ..     160     235 ..     154     237 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 1.9
       Sec20 35 tkslekleeeykqv 48
                tk l++++ ++ ++
  EPX72608.1 10 TKLLQSIQKDLDEF 23
                44444444444444 PP

  == domain 2  score: 27.8 bits;  conditional E-value: 5.9e-10
       Sec20  14 sqllsqevqqSeenleeldastkslekleeeykqvedvlsrskklvkklerrdktdkllvflalglflacvvyvvkk 90 
                 + ++ +  ++  + l +l+++   l++++ +  +v+++l  s+  ++ ++rr+++dk++ +++ ++ ++ ++y++ +
  EPX72608.1 160 ESQIDEYLERGRLLLGDLVEQKTILKSTKKKVLDVANTLGISRTTLSAINRRSRQDKVIFYSGAAF-VFFCFYLIVR 235
                 56677778888889999*****************************************99999776.5666777765 PP

>> AAA_13  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   1.2   8.6e-06     0.026     333     433 ..       9     106 ..       2     113 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 8.6e-06
      AAA_13 333 leeqLkglqraleaKrkepfksvelesvkakiesikklvaeineliakhNekvan..leeekeeakkklelhlveeleseldeykkkykklekaiekle 429
                  ++ L+++q+ l++    +  + ++ s+++   +i+ +  ++n++i+++N +v++  + ++k++a++ ++ ++ +  +s   ++ +++++l++++ ++ 
  EPX72608.1   9 CTKLLQSIQKDLDEFERGVEDENNTISLAGIQGQISASFLSLNRSIEDYNSMVKRelIPAKKNKATVRVQEFYQK--HS---QLSEHFERLKAQVRDAA 102
                 455567777777777766777777777777778999*****************9844566666666666665433..33...44566666666666666 PP

      AAA_13 430 kelk 433
                 ++++
  EPX72608.1 103 HAKN 106
                 5555 PP

>> HTH_AraC  Bacterial regulatory helix-turn-helix proteins, AraC family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   1.3e-05     0.039       1      26 [.     184     206 ..     184     211 .. 0.92

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 1.3e-05
                 HHCCCSCT--HHHHHHHTTSSHHHHH CS
    HTH_AraC   1 LrenlstnltiediAdelgfSrsyFs 26 
                 L+   st++++ d+A++lg+Sr+++s
  EPX72608.1 184 LK---STKKKVLDVANTLGISRTTLS 206
                 67...99*****************98 PP

>> PriC  Primosomal replication protein priC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   1.7   3.8e-05      0.11      42     132 ..      10     104 ..       3     113 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 3.8e-05
                 HHHHHHHHHHHHHHHHHHTTT-.HHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSS...ST.....TTSSHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        PriC  42 sdYleeiektlkqLekaveenr.aeqvaflaerlvaqieAlqrelattelrkkea...kqkkksrkkshqlyqelakhqeyerrLeemiaereqq 132
                 +  l+ i+k+l+++e+ ve+++ +   a +  +++a +  l+r ++  + + k++   ++k+k+  + +++yq++++  e  +rL++++++   +
  EPX72608.1  10 TKLLQSIQKDLDEFERGVEDENnTISLAGIQGQISASFLSLNRSIEDYNSMVKRElipAKKNKATVRVQEFYQKHSQLSEHFERLKAQVRDAAHA 104
                 556899************9986566666668999999999*****9999888876111455555588899999**************99987654 PP

>> HTH_8  Bacterial regulatory protein, Fis family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   7.1e-05      0.21      22      36 ..     192     206 ..     181     207 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 7.1e-05
                 HHHHHHHTS-HHHHH CS
       HTH_8  22 skAArlLGisRrtLy 36 
                  ++A+ LGisR+tL 
  EPX72608.1 192 LDVANTLGISRTTLS 206
                 579**********95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1130  (0.0630264); expected 358.6 (0.02)
Passed bias filter:                      769  (0.0428914); expected 358.6 (0.02)
Passed Vit filter:                        78  (0.00435049); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 1763.13
//
Query:       EPX72609.1  [L=554]
Description: hypothetical protein SOCG_00372 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.2e-05   24.2   0.2    6.8e-05   23.1   0.2    1.6  1  FHA             FHA domain
     0.0011   19.2   0.1      0.002   18.4   0.1    1.3  1  Yop-YscD_cpl    Inner membrane component of T3SS, cytoplasmic
  ------ inclusion threshold ------
      0.013   15.3   0.1      0.043   13.6   0.0    1.8  1  dCache_1        Cache domain
      0.062   11.9   0.0      0.098   11.3   0.0    1.2  1  Chitin_synth_2  Chitin synthase


Domain annotation for each model (and alignments):
>> FHA  FHA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.2   1.5e-08   6.8e-05       1      67 [.      86     150 ..      86     152 .. 0.83

  Alignments for each domain:
  == domain 1  score: 23.1 bits;  conditional E-value: 1.5e-08
                 EEEESS.TTSSEETT..STTSTTTEEEEEEETTCEEEEEEEESSSSSEEETTEEESTTSEEEE-TTEEEE CS
         FHA   1 vtiGRs.sdcdivld..dpsiSrkHalikfdkgsgkvyleDlgSknGtfvNgqrigkgepveLksgdvie 67 
                 ++iGRs ++cd vl+  d+ iSr+Ha++ ++ +  +  +e +g  nG  + ++  +    +  k +d++ 
  EPX72609.1  86 IKIGRStQQCDHVLSttDKAISRVHAIVICTLD--RMVVECVG-WNGMILTDSLRKA--VYHMKKNDRVV 150
                 58****999******999***************..99999998.9999885554444..77777777665 PP

>> Yop-YscD_cpl  Inner membrane component of T3SS, cytoplasmic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.1   4.5e-07     0.002      18      79 ..      85     149 ..      78     151 .. 0.78

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 4.5e-07
                   EEEEES-TT.-SEE--..-TTS-TT-EEEEEETTEEEEEE-CESS--EETTEE-S.ECC--TTSEE CS
  Yop-YscD_cpl  18 evviGsded.cDivLs..DkevsrkhlkLeveeesvrledlgsrngllvngerve.elelrpgdvl 79 
                    + iG++ + cD vLs  Dk++sr+h+ + ++ +++++e     ng+++++  ++  + ++++d++
    EPX72609.1  85 VIKIGRSTQqCDHVLSttDKAISRVHAIVICTLDRMVVE-CVGWNGMILTDSLRKaVYHMKKNDRV 149
                   6789*99999*****655********************9.55556665555544426668888776 PP

>> dCache_1  Cache domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   9.5e-06     0.043      54     105 ..     460     510 ..     416     548 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 9.5e-06
    dCache_1  54 easreslqallksilksnpdisgv..ylvdadGqviassdpssppnlegtddpa 105
                  +  +++q++l++++k++p++++v  +  da+G+ ++s +++sp+     dd  
  EPX72609.1 460 GMPLAAIQDHLRELAKHYPYLKEVrrFGTDANGDPLWSQWYYSPEED---DDEE 510
                 666789***************99998889*********999988664...2322 PP

>> Chitin_synth_2  Chitin synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   2.2e-05     0.098      55      98 ..     245     289 ..     225     318 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 2.2e-05
  Chitin_synth_2  55 dkrkll.lvvcdGlikGsGndkstPeivldllkdavspkedvepl 98 
                      k+++l  ++  G+  G+ n ++tPe+ +++++   +++e+++p+
      EPX72609.1 245 RKHRMLdRLIEAGMEEGKANARATPEVDMSMMNKSAAKMEESDPY 289
                     456666358889*********************999999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (554 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       443  (0.0247086); expected 358.6 (0.02)
Passed bias filter:                      320  (0.0178482); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.51
# Mc/sec: 3291.87
//
Query:       EPX72610.1  [L=724]
Description: heat shock protein Pss1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   6.7e-161  536.5   0.1   9.2e-161  536.0   0.1    1.2  1  HSP70     Hsp70 protein
      1e-10   41.0   0.1    2.6e-10   39.6   0.0    1.6  2  MreB_Mbl  MreB/Mbl protein
     0.0091   16.4   0.6        2.2    8.7   0.3    2.9  2  FtsA      Cell division protein FtsA


Domain annotation for each model (and alignments):
>> HSP70  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  536.0   0.1  1.5e-164  9.2e-161       1     598 [.       7     651 ..       7     652 .. 0.95

  Alignments for each domain:
  == domain 1  score: 536.0 bits;  conditional E-value: 1.5e-164
                 EEEEEEXSSEEEEEEEETTEEEEEXXTTSXSSEESEEEEXTTSEEETHHHHHCTTTTGGGEEEXGGGTTTXBTTSHHHHHHHTTXSSEEEEETTSBEEE CS
       HSP70   1 viGiDLGttnsvvavmeggkievianeegnrttPsvvaFtkkerlvGeaAkrqavtnpkntvfsvKrliGrkfsdpevqkeikelpykvvkkengkavv 99 
                 v+GiD G+ ++v+av++++ i+vi+ne +nr+tPs+v++++  r +Ge Ak+q ++n kntv s+Krl Gr+++dpe+q+  + + +   ++ +g ++ 
  EPX72610.1   7 VVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERCRFLGEGAKSQEASNFKNTVGSLKRLAGRSLDDPEIQQIESAFVSAPLAEVDGFVGT 105
                 79*****************************************************************************98887777777777****** PP

                 EEEETTE..EEEHHHHHHHHHHHHHHHHHHHHTSBEEEEEEEEXTTXXHHHHHHHHHHHHHTTXEEEEEEEHHHHHHHHHHTCCSS.....SCEEEEEE CS
       HSP70 100 eveaage..kftpeqisamvLkklketaeaylgkkvtdavitvPaYfndaqRqatkdAgkiAGLnvlRivNepTAaalaYGldkkd.....kernvlvy 191
                 +v++ +e   ++  q+ a+  +k+k++aea l  +v+d+vi++Pa+f+d qR+a+ +A+++AGLn lR++N+  Aaal YG+ k+d     ++r+v+++
  EPX72610.1 106 KVRYLNEetALSNIQLIAAYFTKVKAIAEAELIGSVSDVVISIPAWFTDIQRRAILEAANVAGLNPLRLMNDNAAAALTYGITKTDlpeaeDPRKVAIV 204
                 ****9987899999****************************************************************************99******* PP

                 EEXSSXEEEEEEEEETTEEEEEEEEEETTXSHHHHHHHHHHHHHHHHHHHHSXXGGGSHHHHHHHHHHHHHHHHHTTTSSCSEEEEEEEEEETTTEEEE CS
       HSP70 192 DlGggtfdvSilelekGvfevkaTagDthlGGedfDealvehlveefkkkegidlskdkkalqrlkeaaekaKkeLSsskqteinleietvdedgkdls 290
                 DlG++ + vSi+e+++G+f++k+T +D +lG +++D+al++h+++efk+k++id+ +++ka  rl  a+e++Kk LS+  ++++++++e +++ + d s
  EPX72610.1 205 DLGHSNYSVSIVEFSRGQFHIKSTVCDRNLGSRNMDKALIDHFAAEFKQKYKIDVLSNSKATFRLAAAVERLKKVLSA--NASAPINVEMIMN-DIDAS 300
                 ******************************************************************************..89999999999**.9**** PP

                 EEEEHHHHHHHHHHHHHHTHHHHHHHHHHCTEEGGGCSEEEEESGGGGSHHHHHHHHHHTTCHHBSSSHTTTHHHHHHHHHHHHHCTCGCSHCCEEEEB CS
       HSP70 291 eklsRakfeelvedllertlepvekalkdaklkkeeidevvlvGGstRiPkvqelvkelfgkepsktvnpDeavaiGAAvqagvlsgeeevkdllllDv 389
                 + l+R++feel+++ller+++p++ al +a++kkee+ ++++vGG tR+P v+e+v+++fgk++s t+n+Deava+G+A+ +++ls+ ++v+d+++ D+
  EPX72610.1 301 SFLKREEFEELIKPLLERLTKPLQDALDQAGIKKEELYSIEMVGGCTRVPSVKETVSNFFGKPLSFTLNQDEAVARGCALSCAILSPVFRVRDFSVHDI 399
                 *************************************************************************************************** PP

                 ESS-EEEEETTTEEEEEESTTC...BSSEEEE.EEEEESSTTSS.SEEEEEEESSSSBGGGS..EEEEEEEEECESSCSTT.CSEEEEEEEEETTSCEE CS
       HSP70 390 tpLslgietlggvmtkliernt...tiptkks.qvfstaadnqt.aveievlqgerelvkdn..kllgsfeldgippaprG.vpqieVtfdidanGilt 480
                 tp  + i  +++ + ++ e+ t   +++ ++  +++++++++++ ++++ ++++ +el++ n   +++++ +++++p ++G  + ++++ ++d +Gil 
  EPX72610.1 400 TP--YPITFSWEPIPENPEEDTsleVFSRNNPiPSTKILTFYRKaPFTLDAFYSHKELLPGNirPSIARYLINDVKPNSQGdLSIVKIKARLDLHGILV 496
                 **..********98887766542227888888899********99*****************999****************77889************* PP

                 EEEEETTTCCEEEEEEECCSSSBHHHHHH................................HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       HSP70 481 vsakdketgkeeeitieaseglseeeiek................................mvkdaeesaeedkkkkeaieakneaeelvyslekklee 547
                 v++++  +++e e+++e++ +  eee ++                                  + ++++ ++dk   e++++kn +ee++y++++kl++
  EPX72610.1 497 VEQAYIVEEQEVEEPVETTPKEGEEEKDEpvkmrkvkklvktcdlsvsveedrlpekvlekYSEMEHQMIATDKLVSETVDRKNALEEYIYDTRSKLDD 595
                 ***********999999998877777777899*************************98876666778899**************************** PP

                 H.GGGSTHHHH....HHHHHHHHHHHCHTTSSCHHHHHHHHHHHHHHHHHHHHHHH CS
       HSP70 548 e.aekvseaek....ekvesaieeLkeeleeeekeeieakteelkkvvekiaekly 598
                   a + +e+e     e + +++++L+ee+e++ k+ + ak+e+l +++ +i+++++
  EPX72610.1 596 IyAPFTNEEESskfkELLAASEDWLYEEGEDTTKAVYTAKLEDLMRIGGPIRQRYL 651
                 9766666666666657788999************************9999999875 PP

>> MreB_Mbl  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0      0.24   1.4e+03       3      20 ..       7      24 ..       5      45 .. 0.70
   2 !   39.6   0.0   4.4e-14   2.6e-10      88     317 ..     135     380 ..     113     386 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.24
                EEEEEE-SSEEEEEETTT CS
    MreB_Mbl  3 dlgiDLGtantlvyvkgk 20
                 +giD G  +t++ v  +
  EPX72610.1  7 VVGIDFGNSKTVIAVARN 24
                689999999999976433 PP

  == domain 2  score: 39.6 bits;  conditional E-value: 4.4e-14
                 SS-S.S--EEEEEE-SS--HHHHHHHHHHHHHTT-SEEEEEEHHHHHHHHTT-......-TTSSS-EEEEEE-SS-EEEEEE..ETTEEEEEEEE...S CS
    MreB_Mbl  88 kksl.skprvvicvPsgiteverrAvkeaakkaGarevllieeplaAAiGagl......pveepsgnmvvdiGggttevavi..slggivtsksv...r 174
                 ++ + s + vvi++P   t+++rrA+ eaa+ aG +   l+++  aAA+  g+      + e+p+   +vd+G    +v+++  s g+  ++++v    
  EPX72610.1 135 AELIgSVSDVVISIPAWFTDIQRRAILEAANVAGLNPLRLMNDNAAAALTYGItktdlpEAEDPRKVAIVDLGHSNYSVSIVefSRGQFHIKSTVcdrN 233
                 333337789****************************************9887433333356788899************9854677877777775646 PP

                 -SHHHHHHHHHHHH....HHHHSEE--HHHHHHHHHHH-BSS--HHHH...EEEEEEEETTTTCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHTS-H CS
    MreB_Mbl 175 vaGdeldeaiikyi....rkkynlliGertaekikieigsavkeeeee...kmeikGrdlvtglpkevevsseevrealkepvsaiveavkevLektpp 266
                 ++  ++d+a+i++     ++ky++ + +++  + +++ +    ++  +   +  i+   +++ +  +  ++ ee +e +k  ++++++ ++ +L+++  
  EPX72610.1 234 LGSRNMDKALIDHFaaefKQKYKIDVLSNSKATFRLAAAVERLKKVLSanaSAPINVEMIMNDIDASSFLKREEFEELIKPLLERLTKPLQDALDQAGI 332
                 89999******9963333777777776665555555444333332222335899999**************************************9764 PP

                 HHHHHHHHH-EEEESGGGGSBTHHHHHHHHHSS-EEE-SSTTTHHHHHHHH CS
    MreB_Mbl 267 eLaadivdrgivltGGgallkgldkllseetglpvkvaedpltcvakGtgk 317
                     ++   +i ++GG++ +  +++++s+ +g p + + +  ++va+G++ 
  EPX72610.1 333 KK-EEL--YSIEMVGGCTRVPSVKETVSNFFGKPLSFTLNQDEAVARGCAL 380
                 32.233..4699************************************975 PP

>> FtsA  Cell division protein FtsA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.3   0.00037       2.2       1      25 [.       8      29 ..       8     170 .. 0.78
   2 !    5.0   0.0    0.0054        32       1      85 [.     202     359 ..     202     384 .. 0.52

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00037
                EEEEE-SSSEEEEEEETTEEEEEEE CS
                xxxxxxxxxxxxxxxxxxxxxxxxx RF
        FtsA  1 alvDiGagktdvavaedgalvhlrv 25
                +++D+G++kt +ava++ a+    v
  EPX72610.1  8 VGIDFGNSKTVIAVARNRAID---V 29
                68***************6543...3 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.0054
                 EEEEE-SSSEEEEEEETTEEEE.EEEES-....-HHHHHHHHHHHHT--HHHHHHHHHHH--S--...............................EEE CS
                 xxxxxxxxxxxxxxxxxxxxxx.xxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...............................xxx RF
        FtsA   1 alvDiGagktdvavaedgalvh.lrvigv....ggngitkdiakalrtaveeAerikikyGsala...............................eke 63 
                 a+vD+G++  +v+++e ++ ++ +++  +    g+++++k +   +   +++  +i +      +                                  
  EPX72610.1 202 AIVDLGHSNYSVSIVEFSRGQFhIKSTVCdrnlGSRNMDKALIDHFAAEFKQKYKIDVL-----SnskatfrlaaaverlkkvlsanasapinvemI-- 293
                 78**************9763334433333557899999999666666555555444421.....111112222222223333332323233332220.. PP

                 EEHHHHH..................................................GGGGSTTHHHHHHHH CS
                 xxxxxxx..................................................xxxxxxxxxxxxxxx RF
        FtsA  64 igrkels..................................................ggsalpnleelaera 85 
                                                                          g + +p ++e +++ 
  EPX72610.1 294 ------MndidassflkreefeelikpllerltkplqdaldqagikkeelysiemvgGCTRVPSVKETVSNF 359
                 ......133334444444444444445555555555555555555555555666666666666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (724 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       958  (0.053433); expected 358.6 (0.02)
Passed bias filter:                      445  (0.0248201); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.69u 0.34s 00:00:01.03 Elapsed: 00:00:00.49
# Mc/sec: 4469.97
//
Query:       EPX72611.1  [L=192]
Description: rho family GTPase Cdc42 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-52  177.3   0.0    1.9e-52  177.1   0.0    1.0  1  Ras       Ras family
    2.8e-19   69.5   0.0      4e-19   69.0   0.0    1.2  1  Roc       Ras of Complex, Roc, domain of DAPkinase
    9.4e-08   31.7   0.0    1.3e-07   31.2   0.0    1.1  1  Arf       ADP-ribosylation factor family
  ------ inclusion threshold ------
      0.042   14.1   0.0      0.063   13.6   0.0    1.3  1  PET117    PET assembly of cytochrome c oxidase, mitochondrial
       0.06   12.9   0.0       0.35   10.4   0.0    2.0  2  GTP_EFTU  Elongation factor Tu GTP binding domain


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  177.1   0.0   5.4e-56   1.9e-52       1     159 [.       5     175 ..       5     178 .. 0.98

  Alignments for each domain:
  == domain 1  score: 177.1 bits;  conditional E-value: 5.4e-56
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHH.HHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvk.kwveeik 98 
                 K+v+vGd+avGKt+ll++++++kF+++y +T+ +d+y  ++++ ++ ++l ++DTAGqe++++lr+l+y +++++l+++++ts +sfenvk kw+ e++
  EPX72611.1   5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTV-FDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKeKWFPEVH 102
                 89******************************.**********************************************************9******* PP

                 HHSTTTSEEEEEEETTTGGG............G-SS-HHHHHHHHHHHT.SEEEEEBTTTTCTHHHHHHHHHHH CS
         Ras  99 rvaeenvpivLvGnKvDlee............kravsteegeelakelg.lkfletSAktnenveeafeellre 159
                 ++++  vp+++vG+++Dl++            k++++ e+ge+la+elg +k++e+SA t+ +++++f+e++ +
  EPX72611.1 103 HHCP-GVPCLIVGTQIDLRDdpsvqqklarqhKHTLTHEQGERLARELGaVKYVECSALTQRGLKNVFDEAIVA 175
                 ****.7*************************999***********************************98765 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.0   0.0   1.1e-22     4e-19       1     120 []       5     119 ..       5     119 .. 0.87

  Alignments for each domain:
  == domain 1  score: 69.0 bits;  conditional E-value: 1.1e-22
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE...GHHHHCH. CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd...srssenl. 95 
                 K v+vGd++vGKt+ll +++++kf +++ +t+  +++ + +  i g   d   + ++l ++DtaGqe+++ l+pl + + +++++++      s+en+ 
  EPX72611.1   5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVM--I-G---D---EPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSvtsPASFENVk 94 
                 789*****************************999876533..2.2...2...3589****************************99854344678873 PP

                 HHHHHHHHHHCSSS-EEEEEE-TTT CS
         Roc  96 keWlkelkkvagkspvilvgnkiDl 120
                 ++W+ e++++++  p+++vg++iDl
  EPX72611.1  95 EKWFPEVHHHCPGVPCLIVGTQIDL 119
                 68*********************95 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2   0.0   3.7e-11   1.3e-07      15     169 ..       4     170 ..       2     175 .. 0.82

  Alignments for each domain:
  == domain 1  score: 31.2 bits;  conditional E-value: 3.7e-11
                 EEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSSEEEE.EEEE..TTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHHHHHHCT CS
         Arf  15 lrilllGLDnaGKtTilkklkleelvt.tvPTigfnve.elei..knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkalle 109
                 ++++++G  + GKt +l  ++++++ +  vPT+  n   +++i  + +++ ++D  Gqe   +l    +++td+ + +  ++    +e+ ke+    + 
  EPX72611.1   4 IKCVVVGDGAVGKTCLLISYTTNKFPSdYVPTVFDNYAvTVMIgdEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEV- 101
                 79*****9999*************97659***988864377775456999**********9999999************************9876655. PP

                 SGCCTTSEEEEEEE-TTSTTSS-HHHHHHHTTGGGSS.........SSSSEEEEEEBTTTTBTHHHHHH CS
         Arf 110 eeelkevallvlaNKqDlpealseeelrellgleelk.........gkrkleiqkcsavkgeglkegle 169
                 +++   v+ l+++ ++Dl+++ s ++  +  + ++l+             ++ ++csa++++glk+ ++
  EPX72611.1 102 HHHCPGVPCLIVGTQIDLRDDPSVQQKLARQHKHTLTheqgerlarELGAVKYVECSALTQRGLKNVFD 170
                 45688**************999887766666666655445444333445678899*********99887 PP

>> PET117  PET assembly of cytochrome c oxidase, mitochondrial
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.8e-05     0.063      36      69 ..     119     152 ..      99     153 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.8e-05
      PET117  36 irDaerqaeKerkrkenkaeleeqkelrkkyekv 69 
                 +rD++++++K++ +++   ++e+ ++l++++ +v
  EPX72611.1 119 LRDDPSVQQKLARQHKHTLTHEQGERLARELGAV 152
                 8*****************************9876 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.22     8e+02       4      20 ..       4      20 ..       2      31 .. 0.84
   2 ?   10.4   0.0   9.6e-05      0.35      67     188 ..      48     172 ..      35     178 .. 0.69

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.22
                EEEEEEESTTSSHHHHH CS
    GTP_EFTU  4 rnigiighvDhGKtTLt 20
                ++++++g+   GKt+L+
  EPX72611.1  4 IKCVVVGDGAVGKTCLL 20
                67999*********997 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 9.6e-05
                 CSSEEEEEEEESSSGGGHHHHHHHHHT-SEEEEEEETTTB.STHHHHHHHHHHHHTTTE...EEEEEESCGST..HHHHHHHHHHHHHHHHHHHHHHHH CS
    GTP_EFTU  67 tkkylinliDtPGHvdFskevirglrvlDgavlvvdaveG.vepqteevlrlalkegvp...iivfiNKmDrl..kaelkeiveevkqklsrkeeklek 159
                  + y++ l Dt G +d+ +    ++ ++D+ ++ +++++    ++ +e +     +++p     ++ + +D     +  ++++++ k++l+++++  + 
  EPX72611.1  48 DEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVTSPaSFENVKEKWFPEVHHHCPgvpCLIVGTQIDLRddPSVQQKLARQHKHTLTHEQG-ERL 145
                 567889999*************************9999653334555555555555544442777779999986323334455555555522222.222 PP

                 HHHTTTTTEEEEEEBTTTTBTHHHHHHHH CS
    GTP_EFTU 160 ygekgekevpvvfgSalkgegvktlleal 188
                 + e     v+ v +Sal++ g+k++++  
  EPX72611.1 146 AREL--GAVKYVECSALTQRGLKNVFDEA 172
                 2333..47999*******99999988754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       443  (0.0247086); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1402.46
//
Query:       EPX72612.1  [L=1200]
Description: cohesin-associated protein Pds5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-07   31.4   1.8      0.092   13.1   0.0    6.3  6  HEAT        HEAT repeat
    1.2e-06   28.8   0.0     0.0006   20.2   0.0    4.4  5  HEAT_2      HEAT repeats
    0.00055   20.4   1.3     0.0071   16.8   0.0    3.6  4  HEAT_EZ     HEAT-like repeat
     0.0011   19.1   5.5       0.45   10.7   0.4    4.7  5  RTP1_C1     Required for nuclear transport of RNA pol II C-te
  ------ inclusion threshold ------
       0.11   12.9   1.3        4.3    7.8   0.1    4.0  3  RasGEF_N_2  Rapamycin-insensitive companion of mTOR RasGEF_N 
       0.14   12.3   1.7         26    5.0   0.1    3.8  3  YojJ        Bacterial membrane-spanning protein N-terminus


Domain annotation for each model (and alignments):
>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.2   0.0    0.0049        15       1      30 [.     281     310 ..     281     311 .. 0.89
   2 ?   -1.4   0.2       1.3     4e+03       5      27 ..     324     346 ..     322     349 .. 0.82
   3 !   13.1   0.0   3.1e-05     0.092       5      27 ..     364     386 ..     360     388 .. 0.84
   4 ?    3.5   0.0     0.037   1.1e+02       8      26 ..     406     424 ..     399     428 .. 0.82
   5 ?   -0.8   0.0      0.86   2.6e+03       5      21 ..     474     492 ..     472     494 .. 0.74
   6 ?    0.2   0.0       0.4   1.2e+03       8      24 ..     909     925 ..     907     927 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0049
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalaev 30 
                 ++P + + l+ +  +VR+ A++++  ++++
  EPX72612.1 281 IVPQFENELQAEQTSVRRVAIQTVRLMLPH 310
                 78999999**************99877765 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1.3
                 HHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAakaLgal 27 
                 ++  l+D+    R  +++ L ++
  EPX72612.1 324 FCGRLNDKVIACRIDCVEKLMDV 346
                 7899****999999888888765 PP

  == domain 3  score: 13.1 bits;  conditional E-value: 3.1e-05
                 HHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAakaLgal 27 
                  +  l D++ +VR aA++a+g+l
  EPX72612.1 364 YQGKLADSDEKVRIAALQAIGHL 386
                 556699***************98 PP

  == domain 4  score: 3.5 bits;  conditional E-value: 0.037
                 HHT-SSHHHHHHHHHHHHH CS
        HEAT   8 llsDpspeVReaAakaLga 26 
                  l+D+  +VR  A+++L +
  EPX72612.1 406 RLRDKKLSVRIQAIQTLSK 424
                 6899************986 PP

  == domain 5  score: -0.8 bits;  conditional E-value: 0.86
                 HHHHH.T-SSHHH.HHHHH CS
        HEAT   5 llkll.sDpspeV.ReaAa 21 
                 +l+ l sD++ +V R  +a
  EPX72612.1 474 VLQQLnSDTDTRViRLLVA 492
                 56667699****8788776 PP

  == domain 6  score: 0.2 bits;  conditional E-value: 0.4
                 HHT-SSHHHHHHHHHHH CS
        HEAT   8 llsDpspeVReaAakaL 24 
                 l++Dp  +VR a +++L
  EPX72612.1 909 LCQDPFFDVRNAFIQNL 925
                 57*********999988 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.11   3.2e+02      19      74 ..     265     331 ..     255     344 .. 0.69
   2 !   20.2   0.0     2e-07    0.0006       8      61 ..     368     428 ..     361     436 .. 0.83
   3 ?   -3.4   0.0       4.6   1.4e+04      15      44 ..     559     588 ..     549     591 .. 0.61
   4 ?   -1.3   0.0      0.96   2.9e+03      31      83 ..     709     730 ..     686     773 .. 0.58
   5 ?   -1.0   0.0      0.83   2.5e+03       8      26 ..     909     930 ..     904     956 .. 0.62

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.11
      HEAT_2  19 aairaLgrignp...ealpaLvellededpavRraaaeaLg........aigdpealpaLkellddd 74 
                 + +++L ++++     ++p + + l+ e + vRr a+++          +++ p++++a + +l+d+
  EPX72612.1 265 NLVIQLWQYAPLtllNIVPQFENELQAEQTSVRRVAIQTVRlmlphhslWLDYPKVWAAFCGRLNDK 331
                 5666666666653334577888888899999999999988755555555667788888888888654 PP

  == domain 2  score: 20.2 bits;  conditional E-value: 2e-07
      HEAT_2   8 lendpdpevrraairaLg.......rignp....ealpaLvellededpavRraaaeaLgaigdp 61 
                 l  d+d++vr+aa++a+g       +   +    e+l+++ + l+d++  vR +a+++L+++ ++
  EPX72612.1 368 L-ADSDEKVRIAALQAIGhlsvdiiK---ThvpvEILKLMGDRLRDKKLSVRIQAIQTLSKVYHN 428
                 4.79**************66664332...256689*************************99765 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 4.6
      HEAT_2  15 evrraairaLgrignpealpaLvelleded 44 
                  +   a++  ++ ++++a ++L e+ ++++
  EPX72612.1 559 SLNESALQKFADTNDRQAYKMLMEIFSSKN 588
                 455556666666666666666666665554 PP

  == domain 4  score: -1.3 bits;  conditional E-value: 0.96
      HEAT_2  31 ealpaLvellededpavRraaaeaLgaigdpealpaLkellddddddvvReaA 83 
                 e++++L +l+                                + +d   ++aA
  EPX72612.1 709 EVIDILKSLC-------------------------------FQGTDGQAKQAA 730
                 3444444444...............................444443334333 PP

  == domain 5  score: -1.0 bits;  conditional E-value: 0.83
      HEAT_2   8 lendpdpevrraairaLg...r 26 
                 l +dp+ +vr a i++L    +
  EPX72612.1 909 LCQDPFFDVRNAFIQNLQkklQ 930
                 4467888888888888875331 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       1.5   4.4e+03      25      41 ..      98     114 ..      88     116 .. 0.82
   2 !    6.7   0.0    0.0036        11      34      55 .]     365     386 ..     349     386 .. 0.77
   3 !   16.8   0.0   2.4e-06    0.0071       2      54 ..     374     424 ..     373     425 .. 0.90
   4 ?   -2.4   0.1       2.5   7.5e+03      25      46 ..     465     489 ..     458     492 .. 0.73

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 1.5
     HEAT_EZ  25 lvpeilpaLlalLndds 41 
                 ++ +++  L+++L++++
  EPX72612.1  98 EIFQVILKLMSGLENPE 114
                 7889*********9887 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0036
     HEAT_EZ  34 lalLnddsdeVRaaAagaLgnl 55 
                    L d++ +VR aA+ a+g l
  EPX72612.1 365 QGKLADSDEKVRIAALQAIGHL 386
                 566778888**********976 PP

  == domain 3  score: 16.8 bits;  conditional E-value: 2.4e-06
     HEAT_EZ   2 rvRraAawaLGrlaggepellqplvpeilpaLl.alLnddsdeVRaaAagaLgn 54 
                  vR aA+ a+G       + ++++vp+ +  L+  +L+d++ +VR +A+ +L++
  EPX72612.1 374 KVRIAALQAIG---HLSVDIIKTHVPVEILKLMgDRLRDKKLSVRIQAIQTLSK 424
                 59*********...555889***99999999998******************97 PP

  == domain 4  score: -2.4 bits;  conditional E-value: 2.5
     HEAT_EZ  25 lvpeilpaLl.alLnddsd.eV.Ra 46 
                  v+ ++ +L+ + Ln+d d +V R 
  EPX72612.1 465 TVDLAMNELVlQQLNSDTDtRViRL 489
                 5666777777799***999888775 PP

>> RTP1_C1  Required for nuclear transport of RNA pol II C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.0    0.0028       8.4      19      73 ..      77     134 ..      61     143 .. 0.84
   2 !   10.7   0.4   0.00015      0.45       7     106 ..     327     426 ..     322     432 .. 0.85
   3 ?    2.7   0.0     0.048   1.4e+02       6      30 ..     405     429 ..     400     500 .. 0.82
   4 ?   -1.7   0.0       1.1   3.2e+03      63      90 ..     564     591 ..     563     602 .. 0.78
   5 ?   -1.9   0.0       1.3   3.8e+03      16      45 ..     687     714 ..     672     746 .. 0.62

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0028
     RTP1_C1  19 glvlLrkliekkskeavldiekilkllle...aLkdedsYvYLnaikgLvaLadvfpe 73 
                 ++v+L +l+    + +++++e+i++++l+    L++++s  YL++ ++L++L +v ++
  EPX72612.1  77 CIVELLRLCAPDAPYTLSQLEEIFQVILKlmsGLENPESTYYLQVYRILESLSNVKSA 134
                 78999999999999999999999999988322466*****************998654 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00015
     RTP1_C1   7 dlqdpllpvrahglvlLrkliekkskeavldiekilkllleaLkdedsYvYLnaikgLvaL.advfpeevlklLleeyeeenekeslderlkvGEaLlr 104
                  l+d+ +++r  ++ +L +++++    +    + +++l +  L+d+d+ v ++a +++ +L +d+++++v  ++l+   ++ ++++l  r+++ ++L +
  EPX72612.1 327 RLNDKVIACRIDCVEKLMDVLRNPL-ASSDVTTYVIQLYQGKLADSDEKVRIAALQAIGHLsVDIIKTHVPVEILKLMGDRLRDKKLSVRIQAIQTLSK 424
                 699*********************8.6777788999************************944777888878888888888888888888887777777 PP

     RTP1_C1 105 vi 106
                 v 
  EPX72612.1 425 VY 426
                 65 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.048
     RTP1_C1   6 kdlqdpllpvrahglvlLrkliekk 30 
                 + l+d+ l vr +++++L+k+ ++ 
  EPX72612.1 405 DRLRDKKLSVRIQAIQTLSKVYHNA 429
                 6799***************998765 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 1.1
     RTP1_C1  63 gLvaLadvfpeevlklLleeyeeeneke 90 
                 +L + ad+ +++  k+L+e ++++n+ +
  EPX72612.1 564 ALQKFADTNDRQAYKMLMEIFSSKNDYQ 591
                 688899999999*******996655544 PP

  == domain 5  score: -1.9 bits;  conditional E-value: 1.3
     RTP1_C1  16 rahglvlLrkliekkskeavldiekilkll 45 
                  ++ l +L++ ++kk++   +  ++++++l
  EPX72612.1 687 DVKVLKTLSHFAKKKKSF--SVSSEVIDIL 714
                 556688899999988844..3333333333 PP

>> RasGEF_N_2  Rapamycin-insensitive companion of mTOR RasGEF_N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.1    0.0014       4.3       3      40 ..     357     394 ..     355     421 .. 0.74
   2 ?    1.5   0.0      0.13     4e+02       7      35 ..     400     428 ..     397     443 .. 0.89
   3 ?   -2.2   0.1       1.8   5.5e+03       8      35 ..     472     499 ..     470     513 .. 0.71

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0014
  RasGEF_N_2   3 ekWgiellvnqLydqsrevvaaaleiLeeacddkesle 40 
                   ++i+l+  +L d++++v+ aal+++ + + d  ++ 
  EPX72612.1 357 TTYVIQLYQGKLADSDEKVRIAALQAIGHLSVDIIKTH 394
                 579***********************998877654444 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.13
  RasGEF_N_2   7 iellvnqLydqsrevvaaaleiLeeacdd 35 
                 ++l+ ++L d++ +v+ +a++ L ++ ++
  EPX72612.1 400 LKLMGDRLRDKKLSVRIQAIQTLSKVYHN 428
                 78999******************998665 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 1.8
  RasGEF_N_2   8 ellvnqLydqsrevvaaaleiLeeacdd 35 
                 el ++qL+ +++  v   l ++++++++
  EPX72612.1 472 ELVLQQLNSDTDTRVIRLLVAMNHFSEK 499
                 7899999988888888888888887554 PP

>> YojJ  Bacterial membrane-spanning protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.1    0.0088        26      46      65 ..     103     122 ..      92     124 .. 0.75
   2 ?    1.8   0.1     0.089   2.7e+02      43      65 ..     594     616 ..     577     617 .. 0.93
   3 ?    1.5   0.0      0.11   3.2e+02      48      64 ..     670     686 ..     662     688 .. 0.90

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.0088
        YojJ  46 irekfaeletlassyYLqsy 65 
                 i + ++ le+  s+yYLq y
  EPX72612.1 103 ILKLMSGLENPESTYYLQVY 122
                 44566779999*******98 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.089
        YojJ  43 lesirekfaeletlassyYLqsy 65 
                 l+++++ f+++ +  s+ ++ ++
  EPX72612.1 594 LKNVKHLFKRVSASMSTQHFECF 616
                 899******************98 PP

  == domain 3  score: 1.5 bits;  conditional E-value: 0.11
        YojJ  48 ekfaeletlassyYLqs 64 
                 e f+++e+++ss+ L++
  EPX72612.1 670 ELFSNMESMISSFGLNA 686
                 689**********9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1255  (0.0699983); expected 358.6 (0.02)
Passed bias filter:                      475  (0.0264934); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.84u 0.28s 00:00:01.12 Elapsed: 00:00:00.45
# Mc/sec: 8002.22
//
Query:       EPX72613.1  [L=987]
Description: CAMK/CAMKL/KIN4 protein kinase Ppk1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-58  198.7   0.0    1.9e-58  197.9   0.0    1.4  1  Pkinase        Protein kinase domain
      1e-34  120.0   0.0    1.6e-34  119.4   0.0    1.3  1  Pkinase_Tyr    Protein tyrosine kinase
    1.3e-08   34.5   0.0    2.3e-08   33.7   0.0    1.4  1  Kinase-like    Kinase-like
     0.0012   17.8   1.4     0.0074   15.3   0.0    2.7  3  Haspin_kinase  Haspin like kinase domain
     0.0018   18.3   0.0     0.0029   17.6   0.0    1.4  1  APH            Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.014   14.7   0.0      0.031   13.6   0.0    1.5  1  Kdo            Lipopolysaccharide kinase (Kdo/WaaP) family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  197.9   0.0   6.3e-62   1.9e-58       4     264 .]     468     745 ..     465     745 .. 0.90

  Alignments for each domain:
  == domain 1  score: 197.9 bits;  conditional E-value: 6.3e-62
                 EEEEEEESSEEEEEE........EETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS.CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHS CS
     Pkinase   4 leklGeGsfGkVyka........veketgkivAvKkikkekakkkkekkvlrEikilkklk.hpnivrlyevfeekdelylvleyveggeladllerkg 93 
                  +++G+G+fGkV  +        ++k+   +v++K+i++ k      +kv+rE +il++++ hpniv++++ +++k+++ +vl+yv+ggel+d++ +++
  EPX72613.1 468 GRTIGRGEFGKVKLGwplpgsspFKKHPAPQVVIKIIRVVKGGRLL-RKVIREATILREVDdHPNIVKYVDLIRTKHHMGIVLDYVSGGELFDYILASR 565
                 689*********876333333336889999**********999877.59************************************************** PP

                 S--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS............BCTTTSCGGGS-HHHH..TTSCB.SHH CS
     Pkinase  94 slseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk............ltsfvgtseYlAPEvl..keney.skk 177
                  l++e a k+++q+++g+ ylHskg++HrDlK eNiL+d+k+++ i+DFG+a+ + +  +            +++ +g++ Y APE++  k+ +y +++
  EPX72613.1 566 RLEDEMACKLFAQLISGVGYLHSKGVVHRDLKLENILLDSKKNIIIADFGFATTFGQFGSqnnqvstakpdlFRTSCGSPCYAAPELVncKTGSYaGTQ 664
                 *****************************************************99887777889************************99666677*** PP

                 HHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 178 vDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 +D+Ws+Gvily +l+g  pf ++ ++ + e+ ++    ++k +   + +l  ++ i+++ +dll+k+l  dp++Rl++  +++hpyl
  EPX72613.1 665 ADIWSCGVILYAMLAGYLPFDDDPHNPNGENVVR----LYKYI--CSTSLIFPEYINDKPRDLLRKILVPDPSRRLSMFGIMRHPYL 745
                 *********************6666664444444....44444..456888999*******************************97 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.4   0.0   5.3e-38   1.6e-34       3     254 ..     467     738 ..     465     742 .. 0.82

  Alignments for each domain:
  == domain 1  score: 119.4 bits;  conditional E-value: 5.3e-38
                  EEEEEEEESSEEEEEEEEET....TTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS.-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkg....ekekkevkVavKtlkeeateeekeelleeakimkkl.khpnivkllgvctkeepllivteyvkgGdLlkfLrkk 95 
                  lg+++G+G+fGkV  g         k++   +V++K+++  +  +  +++++ea+i++++ +hpnivk++ ++  ++++ iv++yv+gG+L +++ ++
   EPX72613.1 467 LGRTIGRGEFGKVKLGWPLPgsspFKKHPAPQVVIKIIRVVKGGRLLRKVIREATILREVdDHPNIVKYVDLIRTKHHMGIVLDYVSGGELFDYILAS 564
                  789*************988788888899999*****************************************************************98 PP

                  CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEET...TTSSEEEETTSST......SGGGGS-HHHHHHSE... CS
  Pkinase_Tyr  96 ekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardi...ekddeyvkkeeak......lpvkWmapEslkekk... 181
                    ++l+ +  +++ +q+ +G+ yL+sk +vHrdl   N+Ll+++k + i+DfG a +     +++++v++ + +       +  + apE ++ k+   
   EPX72613.1 565 --RRLEDEMACKLFAQLISGVGYLHSKGVVHRDLKLENILLDSKKNIIIADFGFATTFgqfGSQNNQVSTAKPDlfrtscGSPCYAAPELVNCKTgsy 660
                  ..9*****************************************************985332222222222211111111456899****99888776 PP

                  EEHHHHHHHHHHHHHHHHTTSSGTTTTS.HHHH...HHHHH..HTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHH CS
  Pkinase_Tyr 182 ftsksDvWsfGvllwEiftlgespypgl.knee...vlekl..kegkrlekpekcpeelyelmkkcweedpeeRptfse 254
                    +++D+Ws Gv+l+ ++  g  p+ +  +n +   v++ +    ++ l  pe+++++  +l++k +  dp++R ++  
   EPX72613.1 661 AGTQADIWSCGVILYAMLA-GYLPFDDDpHNPNgenVVRLYkyICSTSLIFPEYINDKPRDLLRKILVPDPSRRLSMFG 738
                  779*************999.99997665322222223333311335567789999999999999999999999988755 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.7   0.0   7.8e-12   2.3e-08     140     260 ..     568     694 ..     555     733 .. 0.75

  Alignments for each domain:
  == domain 1  score: 33.7 bits;  conditional E-value: 7.8e-12
  Kinase-like 140 kletiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvlseve..............kgfaPpEllgsrggytrkn 223
                  + e +++  l +qli  + +L++kg+vh +++ +n+lld k  +++ +f+   + g+ +  ++                  +a pEl++ ++g     
   EPX72613.1 568 EDEMACK--LFAQLISGVGYLHSKGVVHRDLKLENILLDSKKNIIIADFGFATTFGQFGSQNNQVstakpdlfrtscgsPCYAAPELVNCKTG----- 658
                  3344444..4579*******************************************9999755441444555555444444555555555444..... PP

  Kinase-like 224 ktkmthkldaWqlGlviyriwclklPltlateeakee 260
                        + d W  G+  y + + +lP++ +  + + e
   EPX72613.1 659 -SYAGTQADIWSCGVILYAMLAGYLPFDDDPHNPNGE 694
                  .3334678********************987766665 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.6       0.2   5.9e+02      17      79 ..     344     406 ..     308     420 .. 0.74
   2 !   15.3   0.0   2.5e-06    0.0074     230     254 ..     593     617 ..     588     639 .. 0.85
   3 ?   -2.6   0.0      0.66     2e+03     185     203 ..     933     951 ..     908     954 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.2
  Haspin_kinase  17 sslkhktshssLqkfsssssessssnkislPvkdqvsrdkikkklrnsesllslnsqeevkdf 79 
                    + l +  s +  + + s +++ ++  ++ +P+ + +sr k+ +k +   +++  ++++ + +f
     EPX72613.1 344 PPLFNNNSFAVGDLYGSPKETVTNISSLHSPTRSRISRAKAFAKNTTNIQVIKKKNEQYIAHF 406
                    44444444444444467777888889999***********99999998888888887777666 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 2.5e-06
  Haspin_kinase 230 HRdLhldniLvdknlnvtlidlkls 254
                    HRdL+l+niL+d++ n+++ d+  +
     EPX72613.1 593 HRDLKLENILLDSKKNIIIADFGFA 617
                    *********************9776 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 0.66
  Haspin_kinase 185 flvlllkdkGtdLeevklk 203
                    +  l lk +G+d++++k +
     EPX72613.1 933 TNFLSLKRRGKDVSHCKKS 951
                    457999*********9866 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   9.7e-07    0.0029     162     198 ..     577     619 ..     510     620 .. 0.83

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 9.7e-07
                 S........SS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-EE CS
         APH 162 g........elptvllHgDlhpgNllvdpddgrvtGviDfedagl 198
                 +          +++++H+Dl++ N+l+d+ ++ +  + Df++a++
  EPX72613.1 577 AqlisgvgyLHSKGVVHRDLKLENILLDSKKNII--IADFGFATT 619
                 2333357777899***************999999..99****985 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0     1e-05     0.031     113     166 ..     565     614 ..     542     619 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1e-05
         Kdo 113 aelaeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDl 166
                 ++l++e+  +l+ ++   +  lh+ gv H+dl   nill+ ++    +i++ D+
  EPX72613.1 565 RRLEDEMACKLFAQLISGVGYLHSKGVVHRDLKLENILLDSKK----NIIIADF 614
                 557777888888888888999*******************998....6666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (987 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       612  (0.0341346); expected 358.6 (0.02)
Passed bias filter:                      347  (0.0193541); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.75u 0.30s 00:00:01.05 Elapsed: 00:00:00.50
# Mc/sec: 5987.54
//
Query:       EPX72614.1  [L=294]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-18   66.6   4.7    1.9e-18   66.6   4.7    2.9  3  DUF4078   Domain of unknown function (DUF4078)
  ------ inclusion threshold ------
        7.1    6.1   9.0       0.15   11.6   0.4    2.0  2  FAM75     FAM75 family


Domain annotation for each model (and alignments):
>> DUF4078  Domain of unknown function (DUF4078)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.9      0.36   3.2e+03      54      65 ..      26      37 ..      14      56 .. 0.57
   2 ?   -2.7   2.4      0.84   7.6e+03      46      74 ..      67      95 ..      46     112 .. 0.61
   3 !   66.6   4.7   2.1e-22   1.9e-18      13      85 ..     202     276 ..     192     277 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.36
     DUF4078 54 lreeTeeqRkkr 65
                ++++ ee++k+r
  EPX72614.1 26 EKARFEEEKKQR 37
                222222222222 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.84
     DUF4078 46 kqmeeLeelreeTeeqRkkreelkekRka 74
                k+ +e ++ r++ ++++k+r  lk++ ++
  EPX72614.1 67 KRHSEEDAPRKKPNNEQKRRFILKNEDEN 95
                44444444455555555555444444444 PP

  == domain 3  score: 66.6 bits;  conditional E-value: 2.1e-22
     DUF4078  13 atppeevhYdaekEvRtkGvgfyaFskDeeeRkkqmeeLeelreeTeeq..RkkreelkekRkaeleerlkkire 85 
                 ++++++vhYda+kE+RtkG gf++Fs De+eR++q+e+L +++e+T +q  Rk   ++ ++R+++l+ r++ +++
  EPX72614.1 202 RDEQQAVHYDASKEIRTKGIGFFQFSLDENERQQQFESLGRIHEDTVRQqpRKVGLNILKERENKLASRRNTLQK 276
                 334489****************************************7771145555699***********99986 PP

>> FAM75  FAM75 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   2.9      0.19   1.7e+03     289     331 ..      58     100 ..       6     142 .. 0.54
   2 ?   11.6   0.4   1.7e-05      0.15     287     354 ..     225     291 ..     192     294 .] 0.82

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.19
       FAM75 289 qlekdlskdlgqslekgpkdlllsssesssvkvlgsdseeser 331
                 +++ + ++ +++s e+ p+ ++ ++ ++      ++++ee++r
  EPX72614.1  58 EPRSNYARVKRHSEEDAPRKKPNNEQKRRFILKNEDENEEDLR 100
                 2233334444444444444444333222222222222222333 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 1.7e-05
       FAM75 287 klqlekdlskdlgqslekgpkdlllsssesssvkvlgsdseesersllrslssksssvslrsldqkql 354
                 +++l+++ ++++ +sl+++++d +++++++   + l+ + e+++ s +++l+++++++  ++  ++q+
  EPX72614.1 225 QFSLDENERQQQFESLGRIHEDTVRQQPRKVGLNILK-ERENKLASRRNTLQKHYERMIGEEWIKQQF 291
                 6889999999**************************9.99999*************999988777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (294 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1228  (0.0684924); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2174.90
//
Query:       EPX72615.1  [L=407]
Description: argonaute binding protein 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-71  242.2   1.0    1.4e-71  241.8   1.0    1.1  1  Arb1      Argonaute siRNA chaperone (ARC) complex subunit Arb
  ------ inclusion threshold ------
      0.097   13.0   0.1       0.17   12.2   0.1    1.5  1  DUF2716   Protein of unknown function (DUF2716)


Domain annotation for each model (and alignments):
>> Arb1  Argonaute siRNA chaperone (ARC) complex subunit Arb1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  241.8   1.0   1.5e-75   1.4e-71       3     389 ..      33     405 ..      31     407 .] 0.87

  Alignments for each domain:
  == domain 1  score: 241.8 bits;  conditional E-value: 1.5e-75
        Arb1   3 skkkkgkptGFEeyyadppltpaeyeeekklYdperpfvdRieeaIqryrarRrl.dserrniFnkYLslGGidttqrqfqGgldkeeleeldkeeiae 100
                 +kk+ +k tG+E+ + +p +  +e +e +klY+ e p++ R+e+ +q+yr+ Rr+ + +r+++F+ YL+lGGi+++q+qf+Ggld +e    d++  ++
  EPX72615.1  33 LKKQEDKLTGWEDDFQEPEISKEEKAEIEKLYSLEVPLIVRMERFVQKYRKNRRWnEANRSRLFSMYLALGGISSGQKQFTGGLDVNE--GDDAQSTEN 129
                 789999*************************************************4457899**********************9996..667778888 PP

        Arb1 101 atatdvisedkkddsrfydpddkwevDFegVakgFLSsklpalvgle.eeqvekaidvirnFlnYllqHdVCPEYeddikaArkvCdkAkeElpkiaal 198
                  ta d+i++d  +         ++evDF +V++ FLSs+l++ +g++ e+++++a ++i+nFl+ +l+H V+ EYe++i+aA+++ ++A++El+  ++l
  EPX72615.1 130 QTAIDFIQHDILN---------DYEVDFVWVVAVFLSSHLLYRAGVTeEHELRMASQLIQNFLKSVLHHKVAAEYEENIQAALELATRAEKELVDDKRL 219
                 99********995.........8************************9*************************************************** PP

        Arb1 199 laklPGdFntAcstlfggayk.......eyseees.....waeeeeeekglskekakkvfkaavaalgseeqaeklaekaeekkalavveeeeqglevv 285
                 + +lPG +n+A s l+ ++yk       +    ++     +a+ee+e++g++++k + +f             +++++++++++ +++  ++  + ev+
  EPX72615.1 220 SVSLPGPLNRAFSHLYVDNYKglwdnvdT---YHHfapssNAREEKEQEGFKENKNSHIFDLKDFQP---DAHTRFSTEQARSHIKRTLGSDALEAEVL 312
                 *********************98864321...22244443444444589999999999998765443...23468899999999999999999999999 PP

        Arb1 286 eielpseevkeiyeelakkekkkklkpvGklvvkpvviewenpsaaeedlakeeekeveflleedilellfvGmklelevceLncglkfidevldvlps 384
                 + e  + e  ++  el  k    k +p+ k++       w+ p+ +  ++++++  ev++l+e +++el++  ++le++ + L++g++++d+vl+vlp+
  EPX72615.1 313 DQEYLTVELISK--ELIYKY---KNNPLCKARYLV----WNPPGTSYPQQTEKT--EVTILIEPELMELMVLKTHLEASFTFLSNGITIMDTVLAVLPT 400
                 966555554444..222211...456777777777....*****9999998775..******************************************* PP

        Arb1 385 fytfl 389
                 fy+ +
  EPX72615.1 401 FYEEI 405
                 **976 PP

>> DUF2716  Protein of unknown function (DUF2716)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   1.9e-05      0.17       4      70 ..     236     304 ..     233     353 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.9e-05
     DUF2716   4 deeekkiWdkvykrfkfkPstd...eselpsieepapsvtydlsaledekeeakealdavedkilkalra 70 
                  +++k +Wd+v    +f Ps +   e+e ++++e ++s  +dl++ + +++ ++   ++ + +i + l+ 
  EPX72615.1 236 VDNYKGLWDNVDTYHHFAPSSNareEKEQEGFKENKNSHIFDLKDFQPDAH-TRFSTEQARSHIKRTLGS 304
                 578999**************8622256789*************99887743.344555555555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (407 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       962  (0.0536561); expected 358.6 (0.02)
Passed bias filter:                      528  (0.0294495); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 2911.62
//
Query:       EPX72616.1  [L=481]
Description: gar2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.3e-37  124.7   0.2    9.3e-19   67.0   0.0    2.7  3  RRM_1       RNA recognition motif. (a.k.a. RRM, RBD, or RNP d
    3.9e-07   30.1   0.0      0.035   14.2   0.0    3.0  2  RRM_7       RNA recognition motif


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.4      0.48   4.3e+03      48      64 ..      31      47 ..      30      50 .. 0.82
   2 !   55.0   0.0     6e-19   5.4e-15       1      69 [.     255     324 ..     255     325 .. 0.96
   3 !   67.0   0.0     1e-22   9.3e-19       1      69 [.     358     426 ..     358     427 .. 0.98

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.48
                SHHHHHHHHHHHTTEEE CS
       RRM_1 48 skedAekAlealngkkl 64
                +ke A+kA +++ +kk 
  EPX72616.1 31 NKEVAKKAAKKVSEKKS 47
                89999***999998875 PP

  == domain 2  score: 55.0 bits;  conditional E-value: 6e-19
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTT.EEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealng.kklggrel 69 
                 lfVg L+++v+++ L   F++fG ++ ++++ d + g+skg+++V+F+s+e+ +kA e + g k+++gr +
  EPX72616.1 255 LFVGRLSWSVDDQWLGSEFEEFGTVVGARVIMDgQSGRSKGYGYVDFDSPEAVKKACE-VSGqKEIDGRAV 324
                 8*********************************************************.8887****9976 PP

  == domain 3  score: 67.0 bits;  conditional E-value: 1e-22
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrel 69 
                 +fVgnL+++vte+++   F  +G+i+s++l++d + g+ kgf++V+F + ++A++++e +ng  + gr++
  EPX72616.1 358 VFVGNLSFNVTEDDVGSAFATCGEIQSVRLPTDpQSGRLKGFGYVTFSDIDSAKRCVE-MNGHFITGRPC 426
                 8*********************************************************.********987 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.0   3.9e-06     0.035       1      74 [.     252     318 ..     252     337 .. 0.73
   2 !   12.5   0.0   1.3e-05      0.12       1      67 [.     355     414 ..     355     422 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3.9e-06
       RRM_7   1 srkvFvGGlPiDiteeelkatfkefgkvlvdwPkkaeskkkaaenskaakgyvflvfedeksvkaLleacteee 74 
                 s+ +FvG l + ++++ l + f+efg+v+      a+  +  ++  +  kgy ++ f++ ++vk+  e + ++e
  EPX72616.1 252 SCTLFVGRLSWSVDDQWLGSEFEEFGTVVG-----ARVIMDGQS-GR-SKGYGYVDFDSPEAVKKACEVSGQKE 318
                 899***********************9973.....333333332.23.47999999999999998766655554 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 1.3e-05
       RRM_7   1 srkvFvGGlPiDiteeelkatfkefgkvl.vdwPkkaeskkkaaenskaakgyvflvfedeksvkaLl 67 
                 s  vFvG l  ++te+++ ++f + g+++ v  P  ++s +         kg+ ++ f+d +s k+ +
  EPX72616.1 355 SDTVFVGNLSFNVTEDDVGSAFATCGEIQsVRLPTDPQSGR--------LKGFGYVTFSDIDSAKRCV 414
                 567***********************984388888877743........3689999999888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (481 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2845  (0.158681); expected 358.6 (0.02)
Passed bias filter:                      959  (0.0534888); expected 358.6 (0.02)
Passed Vit filter:                       736  (0.0410508); expected 17.9 (0.001)
Passed Fwd filter:                       294  (0.016398); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 3.85u 0.41s 00:00:04.26 Elapsed: 00:00:00.75
# Mc/sec: 1927.38
//
Query:       EPX72617.1  [L=275]
Description: succinate dehydrogenase iron-sulfur protein subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.1e-33  115.5   0.1    1.8e-33  114.8   0.1    1.4  1  Fer2_3          2Fe-2S iron-sulfur cluster binding domain
      8e-10   39.1   6.8      8e-10   39.1   6.8    2.4  2  Fer4_17         4Fe-4S dicluster domain
    1.1e-06   29.0   7.9    1.1e-06   29.0   7.9    2.7  2  Fer4_8          4Fe-4S dicluster domain
    1.3e-06   28.4   4.6    1.3e-06   28.4   4.6    2.1  2  Fer4_10         4Fe-4S dicluster domain
     0.0034   17.3   0.7     0.0034   17.3   0.7    2.3  2  Fer2            2Fe-2S iron-sulfur cluster binding domain
  ------ inclusion threshold ------
      0.029   15.0   9.4      0.029   15.0   9.4    2.7  3  Fer4_7          4Fe-4S dicluster domain
       0.83    9.9  14.5      0.044   14.0   6.6    2.5  2  Fer4_9          4Fe-4S dicluster domain


Domain annotation for each model (and alignments):
>> Fer2_3  2Fe-2S iron-sulfur cluster binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.8   0.1   7.2e-37   1.8e-33       1     107 [.      46     150 ..      46     152 .. 0.95

  Alignments for each domain:
  == domain 1  score: 114.8 bits;  conditional E-value: 7.2e-37
      Fer2_3   1 tlkvkRfdprrdrgkqkvqeyeveae.eedtvldaLlkikeevdptlafrasCregiCGscavainGkptlaCtatikdlakqkseieleplpkfpvir 98 
                 t++++R++p+r++ k+k+q+y+v+ +  + +vldaL+ ik+e+dptl+fr+sCregiCGsca++inG +tlaC  +ik+ +k    +++ plp+  vi+
  EPX72617.1  46 TFEIYRWNPERPDVKPKLQKYQVNLKnCGPMVLDALNSIKNEQDPTLTFRRSCREGICGSCAMNINGSNTLACLCHIKNDDKP---TKIYPLPHCFVIK 141
                 689**********************999***************************************************7764...79*********** PP

      Fer2_3  99 DLvvDidem 107
                 DLv D + +
  EPX72617.1 142 DLVPDLTYF 150
                 *****9876 PP

>> Fer4_17  4Fe-4S dicluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   1.7       1.3   3.4e+03       5      24 ..     103     130 ..      95     133 .. 0.63
   2 !   39.1   6.8   3.1e-13     8e-10       1      61 []     187     260 ..     187     260 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 1.3
     Fer4_17   5 CgyClp........eCpsyeaydnepkk 24 
                 Cg C+         +C  ++++d++p k
  EPX72617.1 103 CGSCAMningsntlACLCHIKNDDKPTK 130
                 5555555556666666666666666655 PP

  == domain 2  score: 39.1 bits;  conditional E-value: 3.1e-13
     Fer4_17   1 rCiqCgyClpeCpsyeaydne...pkkllraakl..........glleeaekeekaslCieCgeCerkCPqgld 61 
                 +Ci C++C  +Cpsy+++++e   p+ l++a+++           +l ++++++ + +C+++ +C+r CP+gl+
  EPX72617.1 187 ECILCACCSTSCPSYWWNSEEylgPAVLMQAYRWiidsrdegtpRRLAAMQNSMSVYRCHTIMNCARTCPKGLN 260
                 6****************9997777999***999999988776655566677779*****************996 PP

>> Fer4_8  4Fe-4S dicluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4  10.2   0.00013      0.34      34      63 ..     158     200 ..      96     202 .. 0.48
   2 !   29.0   7.9   4.3e-10   1.1e-06       2      64 ..     185     258 ..     184     259 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00013
      Fer4_8  34 e..............dvqeeqvleeeealwsCttcgaCtevCpv 63 
                 e              ++ + ++ e+ ++l++C  c +C++ Cp 
  EPX72617.1 158 EpwlqnnnipkgkelYQSRADR-EKLDGLYECILCACCSTSCPS 200
                 1222223333333322222222.34689**************95 PP

  == domain 2  score: 29.0 bits;  conditional E-value: 4.3e-10
      Fer4_8   2 lekCieCgaCqsaCp.............vlrrtkkhlldargeaaedvqeeqvleeeealwsCttcgaCtevCpvg 64 
                 l++Ci C +C ++Cp             vl +  +++ d+r+e +   ++  + ++  ++++C+t ++C++ Cp+g
  EPX72617.1 185 LYECILCACCSTSCPsywwnseeylgpaVLMQAYRWIIDSRDEGTP--RRLAAMQNSMSVYRCHTIMNCARTCPKG 258
                 578***********86666666666665555555888888888666..33333344778***************98 PP

>> Fer4_10  4Fe-4S dicluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1      0.42   1.1e+03      35      52 ..      88     107 ..      75     109 .. 0.69
   2 !   28.4   4.6   5.3e-10   1.3e-06       8      56 .]     187     256 ..     183     256 .. 0.97

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.42
     Fer4_10  35 eeavrkkvekCtg..cgaCv 52 
                 +++  +   +C +  cg+C+
  EPX72617.1  88 QDPTLTFRRSCREgiCGSCA 107
                 55555566778888888885 PP

  == domain 2  score: 28.4 bits;  conditional E-value: 5.3e-10
     Fer4_10   8 tCirCgkCvkaCPadl.....................tsvgakgeaseeeavrkkvekCtgcgaCveaCP 56 
                  Ci C+ C ++CP+++                     +++++++ +    +++  v++C+++ +C++ CP
  EPX72617.1 187 ECILCACCSTSCPSYWwnseeylgpavlmqayrwiidSRDEGTPRRLAAMQNSMSVYRCHTIMNCARTCP 256
                 5************************************9*******************************9 PP

>> Fer2  2Fe-2S iron-sulfur cluster binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.7   1.3e-06    0.0034      19      75 ..      77     120 ..      60     127 .. 0.72
   2 ?   -5.1   5.3         7   1.8e+04      33      47 ..     186     198 ..     165     255 .. 0.67

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 1.3e-06
                 HHHHHH.....HTTTTTSTTSSSSSSSSTTEEEEEESCECTTSSSSTHHHHHTTEEEEGGGS CS
        Fer2  19 lldaae.....enggidipysCggggCgtClvevlegevqsdetelegeeldegklrlaCqt 75 
                 +lda+      +++ + ++ sC++g Cg+C+  ++            g++       laC +
  EPX72617.1  77 VLDALNsikneQDPTLTFRRSCREGICGSCAMNIN------------GSN------TLACLC 120
                 55555555543467788999***********9999............555......366666 PP

  == domain 2  score: -5.1 bits;  conditional E-value: 7
                 TSSSSSSSSTTEEEE CS
        Fer2  33 ysCggggCgtClvev 47 
                 y+C    C+ C + +
  EPX72617.1 186 YECI--LCACCSTSC 198
                 5554..466665544 PP

>> Fer4_7  4Fe-4S dicluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   3.2       4.3   1.1e+04      38      45 ..      98     107 ..      37     120 .. 0.64
   2 ?    0.5  12.6      0.38   9.7e+02      21      50 ..     170     200 ..      96     202 .. 0.64
   3 ?   15.0   9.4   1.1e-05     0.029       2      51 ..     188     258 ..     187     259 .. 0.68

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 4.3
      Fer4_7  38 Clg..CgaCv 45 
                 C    Cg+C+
  EPX72617.1  98 CREgiCGSCA 107
                 3323455554 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.38
      Fer4_7  21 eeenekgtekveid.pekClgCgaCvavCPt 50 
                 +e ++++ ++ ++d   +C+ C  C + CP+
  EPX72617.1 170 KELYQSRADREKLDgLYECILCACCSTSCPS 200
                 3333444455555545679999999999996 PP

  == domain 3  score: 15.0 bits;  conditional E-value: 1.1e-05
      Fer4_7   2 CigCgaCvaaCpvkaieldeeenek...............gtekv........eidpekClgCgaCvavCPtg 51 
                 Ci C  C   Cp+++ + +e+  ++               gt  +         ++  +C +  +C+++CP+g
  EPX72617.1 188 CILCACCSTSCPSYWWNSEEYLGPAvlmqayrwiidsrdeGT--PrrlaamqnSMSVYRCHTIMNCARTCPKG 258
                 ************999998875555544444444444444433..022343343788889************98 PP

>> Fer4_9  4Fe-4S dicluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   1.0       0.5   1.3e+03      34      43 ..      96     107 ..      62     122 .. 0.72
   2 ?   14.0   6.6   1.7e-05     0.044       1      49 [.     187     258 ..     187     259 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.5
      Fer4_9  34 eaCig..CgaCv 43 
                  +C +  Cg+C+
  EPX72617.1  96 RSCREgiCGSCA 107
                 346554577775 PP

  == domain 2  score: 14.0 bits;  conditional E-value: 1.7e-05
      Fer4_9   1 kCtgCgaCveaCpagvv.vedaaerkarlraase......................eaCigCgaCveaCpkg 49 
                 +C+ C  C ++Cp+  + +e+  +  + ++a+++                       +C++ + C+  Cpkg
  EPX72617.1 187 ECILCACCSTSCPSYWWnSEEYLGPAVLMQAYRWiidsrdegtprrlaamqnsmsvYRCHTIMNCARTCPKG 258
                 5***********9877747788888999999999**********************99************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (275 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       576  (0.0321267); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1960.05
//
Query:       EPX72618.1  [L=266]
Description: Arv1-like family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.7e-62  209.0   7.1    8.7e-62  209.0   7.1    1.6  2  Arv1          Arv1-like family
  ------ inclusion threshold ------
       0.33   10.5   1.0        3.1    7.4   0.2    2.2  2  TF_Zn_Ribbon  TFIIB zinc-binding


Domain annotation for each model (and alignments):
>> Arv1  Arv1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  209.0   7.1   9.7e-66   8.7e-62       2     210 .]       3     196 ..       2     196 .. 0.93
   2 ?   -1.6   0.1      0.27   2.4e+03     172     183 ..     214     225 ..     201     262 .. 0.43

  Alignments for each domain:
  == domain 1  score: 209.0 bits;  conditional E-value: 9.7e-66
        Arv1   2 CieCgepvksLytkYskg..nirltkCknCkkvaDkYvEfdnvilfiDllLlkpqaYrHllfNtlereeekfekikslirlvillllfevyltwariek 98 
                 C+eC++ v+sLyt+Y +g  nirl +CknCk++aDkY+E d+v++ iD++L+kpq+YrHllfN+l+      ++++++i + il++lf+v+l w+r+ek
  EPX72618.1   3 CVECNATVDSLYTDYGRGtsNIRLAQCKNCKQFADKYIELDFVLISIDVILMKPQVYRHLLFNSLSA-----RNFRNVINFSILIVLFDVFLIWSRLEK 96 
                 ***************99888********************************************995.....5788*********************** PP

        Arv1  99 ksesessslsaqaivlesakelkqylfflvlalletlvfhlsillllslesslsalllkykkarlnalltalllssyaklfpilmlIWeydltalalsl 197
                 +++    ++++ + ++ s   ++qyl++l+l+l+et+++++sil+l++        l+ +k  ++++ + +++lss++k++p++m+IW+yd++a+a+ +
  EPX72618.1  97 RAA-IFPNTTTENSFI-SLPIVRQYLYLLLLCLVETATYQTSILTLMYG-------LIGWK--HWTSASGSVILSSSTKMLPVFMVIWDYDIPAAAI-I 183
                 643.444444444444.68999**************************9.......89999..99*******************************8.* PP

        Arv1 198 ikllvllsnveal 210
                 ++++vl+sn+eal
  EPX72618.1 184 VEWVVLFSNMEAL 196
                 ***********97 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.27
        Arv1 172 lssyaklfpilm 183
                 lss+ + +++ +
  EPX72618.1 214 LSSILRSLVVYF 225
                 222222222222 PP

>> TF_Zn_Ribbon  TFIIB zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.2   0.00034       3.1       1      19 [.       1      21 [.       1      22 [. 0.88
   2 ?    1.4   0.0     0.025   2.2e+02       2       8 ..      28      34 ..      27      44 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.00034
                  EEETTTTC.EE.CHEETSTTC CS
  TF_Zn_Ribbon  1 ykCPnCgs.tn.lveDperge 19
                  +kC +C+   + l++D+ rg+
    EPX72618.1  1 MKCVECNAtVDsLYTDYGRGT 21
                  89******76779******96 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.025
                  EETTTTC CS
  TF_Zn_Ribbon  2 kCPnCgs 8 
                  +C+nC+ 
    EPX72618.1 28 QCKNCKQ 34
                  7****85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       892  (0.0497518); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1961.71
//
Query:       EPX72619.1  [L=236]
Description: F-box protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.067   13.1   0.3        1.2    9.1   0.0    2.5  2  F-box     F-box domain


Domain annotation for each model (and alignments):
>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.0   6.8e-05       1.2       6      25 ..      27      46 ..      25      51 .. 0.89
   2 ?    1.3   0.0     0.019   3.4e+02      17      33 ..      65      81 ..      64      83 .. 0.87

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 6.8e-05
                S-HHHHHHHHHTS-HHHHHH CS
       F-box  6 LPsevlrhILerLplsdlla 25
                LP e+++ +++++p  d++ 
  EPX72619.1 27 LPIEIVNSVMQYMPAHDVIQ 46
                9****************875 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.019
                TS-HHHHHHHCTT-HHH CS
       F-box 17 rLplsdllalrrVSkgw 33
                rL++ d  alr V k++
  EPX72619.1 65 RLSFLDQYALRVVAKNV 81
                89***********8876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (236 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       333  (0.0185733); expected 358.6 (0.02)
Passed bias filter:                      302  (0.0168442); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1763.42
//
Query:       EPX72620.1  [L=446]
Description: hypothetical protein SOCG_00383 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (446 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1956  (0.109097); expected 358.6 (0.02)
Passed bias filter:                      291  (0.0162307); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.61u 0.25s 00:00:00.86 Elapsed: 00:00:00.40
# Mc/sec: 3325.16
//
Query:       EPX72621.1  [L=461]
Description: D-arabinono-1,4-lactone oxidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      1e-74  251.7   2.6    1.3e-74  251.3   2.6    1.2  1  ALO            D-arabinono-1,4-lactone oxidase
    8.6e-30  103.3   0.0    1.5e-29  102.5   0.0    1.4  1  FAD_binding_4  FAD binding domain


Domain annotation for each model (and alignments):
>> ALO  D-arabinono-1,4-lactone oxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  251.3   2.6   1.5e-78   1.3e-74       2     260 .]     188     459 ..     187     459 .. 0.96

  Alignments for each domain:
  == domain 1  score: 251.3 bits;  conditional E-value: 1.5e-78
         ALO   2 tlrvvpaftlkskqevikfetllenwd..ellkssefirvwwfPytekavvwrankteepe.eskprkslkdellgrlvyeallalsrifpsltplver 97 
                 tlrvvpaf+l +++++i+++tl+e+w+  e+++++ef+rv++fPy+++avvw ank+ +   ++++r+s  + ++ +++ye+ll ++++fp+ +p+++r
  EPX72621.1 188 TLRVVPAFDLIATESSIPISTLFEKWKanEIWQAAEFVRVHVFPYANRAVVWSANKVIPGSvPHTSRPSSFQLKFTSFIYENLLYIGNLFPRFMPTIQR 286
                 9*************************744789*************************999888999999999*************************** PP

         ALO  98 fvfklqyg....kgdeavqdsyevfnmdclvsqfvnEwaiplekgpevLrelkaliekaa...elkvhfPievRcsnad...rplLsvtndrdtlyina 186
                 ++ + +yg      +++v++ +++ +m c +sq+v E+++pl+ + ++L+++ +++   a   ++++h P+evR+++++   +++Ls++++ +t++i+ 
  EPX72621.1 287 LAYHFFYGwrtgRLSTIVGPGFDIMQMFCFFSQHVTEYSVPLDTASDALEKVINYTIGPAleqNIYTHQPLEVRVAAPTpedECWLSTASKVPTCFIEC 385
                 *********998889************************************9998877666779************999888***************** PP

         ALO 187 tmYrpfetnvptekyfkafedimkkagGrPHWaKnflltaedlkelYpdlkkflkvRkklDPegvFlnewlerl 260
                 +mYrp+++nv++e+yf+afe+im +++G+PHWaK+f l++++l el+p+++k+l++R+ +DP++vF+n++++r+
  EPX72621.1 386 IMYRPYHRNVKYESYFNAFEEIMCEYNGKPHWAKEFNLNKKQLLELHPNISKWLNLRNLMDPNRVFWNNYMRRH 459
                 ***********************************************************************985 PP

>> FAD_binding_4  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.5   0.0   1.7e-33   1.5e-29       5     139 .]      32     163 ..      29     163 .. 0.96

  Alignments for each domain:
  == domain 1  score: 102.5 bits;  conditional E-value: 1.7e-33
                    EEESSHHHHHHHHHHHHHCTSCEEEESSSTTEESTTCSCCEEEEEETTS--EEEEETTTTEEEEETTSBHHHHHHHHHHHTTECSSGGGTTCGSBH CS
  FAD_binding_4   5 vrpeseeevaaalrlaneaglpvlvrGgGssllgqavatggvvldlsrlnrileideeegtatveaGvtlgdlvealaakglllglepgsgipgtv 100
                     +p++e++++++l  an ++ +v+v+G+G+s ++ ++ + g +++l+++n+++++d+e++t+tv+aG+++++l++ l++ g+ l+   gs++ ++v
     EPX72621.1  32 YTPKNEDQLRDILVEANTKRKHVRVVGAGHSPSDIVC-STGYLISLDKMNKMVSFDPESQTVTVQAGTRYDQLQRVLEKLGYSLP-IVGSISGTSV 125
                    68**********************************8.***********************************************.57******** PP

                    HHTTTTT-EETTEEGG--HHGTEEEEEEEETTSEEEEEE CS
  FAD_binding_4 101 GGaiatnagGygsekyGlirdnvlglevvladGevvrls 139
                    +G+++t+++G  s +++ +  ++++l+++ladG++v++s
     EPX72621.1 126 AGIMSTCTHG-SSLQHQVLPGYIESLRLMLADGSIVTCS 163
                    **********.788888********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (461 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       446  (0.0248759); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 3345.19
//
Query:       EPX72622.1  [L=717]
Description: antiparallel microtubule cross-linking factor Ase1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-91  306.4  25.4    4.9e-91  306.2  24.8    1.3  1  MAP65_ASE1  Microtubule associated protein (MAP65/ASE1 family
  ------ inclusion threshold ------
        2.7    7.8   9.1       0.62    9.9   2.1    3.2  3  CK2S        Casein Kinase 2 substrate
        4.1    7.6   6.0        4.1    7.5   0.4    3.2  3  Mating_N    Mating-type protein beta 1


Domain annotation for each model (and alignments):
>> MAP65_ASE1  Microtubule associated protein (MAP65/ASE1 family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  306.2  24.8   8.2e-95   4.9e-91       9     590 ..      28     626 ..      10     676 .. 0.84

  Alignments for each domain:
  == domain 1  score: 306.2 bits;  conditional E-value: 8.2e-95
                 HHHHHHHHHHHH...........................HHHHHHHHHHHHHH....HHHHHHHHHHHHHHST-----....-SS--SHHHHHHHHHHH CS
  MAP65_ASE1   9 isesiknffedl...........................lseeneieqkilne....IaelraeasglksiLheepvdvpqsekkelsLlqkkkkldta 76 
                  +e+++++f+ +                           l+e+++++++++++    I+++r+ as+lk  L  ++     +   +++L+q++ +l + 
  EPX72622.1  28 FREQVESHFQRIeslhqilgtdgdnsslfelfttamnaqLHEMEQCKKNLESDcrqkIDTIRFLASSLK--LDDPEA----NLHINTPLIQCLDELTHI 120
                 58999999999999999999999999999999*******************986666777777777777..555444....599*************** PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS---SS--TSS--HHH..........HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----SH CS
  MAP65_ASE1  77 leelrkekaerlaeflelleqlqklceelgeeplsllidslpklee..........leslrkhleelkeekerRleeikelkkqIkslmeeLglepkts 165
                 + +++ +++++la+++ l++ql++ c++lg++++      +p++e+          l+slr + ee+++e  +Rle +++l+++I++l++e g+e++++
  EPX72622.1 121 ESQYLTQYDKKLANIKVLYQQLDQTCKQLGTTFV------IPDFENsflsdvsdalLDSLRLRNEEAQKELGSRLELVNNLESEIIQLWMETGIEVADE 213
                 *******************************888......99999999999999*9******************************************* PP

                 HHHHHHCT-TTTS-....TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS---HHHHHHHTTTSSSSSHCHHHHHHHHHHHHHHHHHHHH CS
  MAP65_ASE1 166 ieedllkesednskklkpltretikkLkllkkeleeqksereeklkdlrekikeLWnrLqvpqeeqeafvrensslsqetidaleeEleRLeeLKkknl 264
                 +  + lk+++ n++    + + +i+kL  +k+ l + k++   +++++r++++ LW++L++      a ++++s++  + + ++e El+ L eLKk+++
  EPX72622.1 214 PSFQELKNTHINRPPQFCVPQILITKLYEQKDMLLNTKENYVMQINSYRNEVHDLWQKLNINAADF-AHLDQSSGVYRDDLIKWERELHQLRELKKQHI 311
                 **************************************************************9999.99****************************** PP

                 HHHHHHHHHHHHHHHHHT---HHHHHTC-TTSTSS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-GGGGTSST....SH. CS
  MAP65_ASE1 265 kklIedlRqeIeelWdkllyseeerkafipvfeeledeelLelhElelkqLkeelesnKeilelvekfeslwedeeeLEakskDpsRlnnRG....ghk 359
                 + +Ied R +I++ Wd l+y++e+r++f+p fe+  +ee L +hE++l+ L++e++ nK +l+l++k++sl e + eL a+++D+sRl +RG    g  
  EPX72622.1 312 PLFIEDARGKIRKAWDVLFYPDEQRRSFSPAFEDNLTEESLAAHEQYLQSLENEARENKHFLNLIAKYSSLLEGKRELDASANDSSRLMQRGrrepGL- 409
                 **********************************************************************************************9999. PP

                 .HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTS--EETTEEHHHHHHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHHHCXXXXXXXXXXXXXXX CS
  MAP65_ASE1 360 iLLkEEKeRkriskhlPkveqeLtekveaweeefgrpFlvdGeklleiieeqweeleekyqererqksarklkkasqteeeilkgskmrtpskrrvtap 458
                  LL+EEK+Rkr+s+ lPkv+  L++++++wee+++r F+++Ge+lle ++e ++++     +r   + +  +k  ++       ++ + +p+k r+   
  EPX72622.1 410 -LLREEKIRKRLSRDLPKVQALLIPELTSWEEKKQRLFMFEGEHLLEKLKEPSQTKT---TAR--ANGTYNPKAPTT-----PSQTANKSPQKGRIATL 497
                 .*****************************************************999...765..444443444443.....45888899999888888 PP

                 XXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXX...XXXXXX..............XXXXXXXXX......XX CS
  MAP65_ASE1 459 kTPsklksmskvsssssslkktpsnskslsankn.talstanerkrklpsanvisknsaagrakrsllarlnskkasasanqnsskllrsP......lr 550
                 +TP ++++ + v s++++l + + n+  + ++ +  + +t    kr+lp++            + +l+++ + +++  ++++ns+++  sP      l 
  EPX72622.1 498 STPTSRNNHRPVASPKTPLSRQKPNEFGTARSVSaDEPQTSAFSKRRLPTTG-----------RLDLNNKFSGARSQSAKHENSKTTP-SPdfgntpLF 584
                 ***9999998888888886666655554444444466666666677777665...........4555555555554444443444333.3333333322 PP

                 XXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXX CS
  MAP65_ASE1 551 pvslfpnslnklsekerdsv..ssqikklsskkelkkvklsp 590
                  +s+ +n+ + +++ + + +  s q     + ++l++v  +p
  EPX72622.1 585 GRSNTKNTPTPQTTTHDRHPqfSLQARSQVTPQSLPTVVPKP 626
                 222222222222222222222332322222233444443333 PP

>> CK2S  Casein Kinase 2 substrate
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   2.1    0.0001      0.62      72     152 ..      60     140 ..      53     149 .. 0.89
   2 ?   -0.3   0.0      0.15   8.9e+02      39      94 ..     218     270 ..     216     302 .. 0.77
   3 ?   -0.8   0.1      0.22   1.3e+03      54      80 ..     341     367 ..     334     404 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.0001
        CK2S  72 lakLrekleelqkvrdsleklvrdalqlyeekadklslkeliersavtPsladmlewlqdiermyrseyllkksllstlsy 152
                  + ++ +l e++++++ le+ +r++ ++++  a++l+l+       +  +l ++l+ l  ie  y  +y +k   +++l +
  EPX72622.1  60 TTAMNAQLHEMEQCKKNLESDCRQKIDTIRFLASSLKLDDPEANLHINTPLIQCLDELTHIESQYLTQYDKKLANIKVLYQ 140
                 5689***********************************99999999888**********************999998864 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.15
        CK2S  39 alqnvklygtplrdfpdlqerLrekqlealeevlakLrekleelqkvrdsleklvr 94 
                  l+n+++++ p     ++ + L+ k++e+ + +l + ++ + ++++ r++++ l++
  EPX72622.1 218 ELKNTHINRPPQF---CVPQILITKLYEQKDMLLNTKENYVMQINSYRNEVHDLWQ 270
                 5666666666533...4467799999999999999999999999999998887765 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 0.22
        CK2S  54 pdlqerLrekqlealeevlakLrekle 80 
                 p ++++L e+ l+a e+ l++L+++  
  EPX72622.1 341 PAFEDNLTEESLAAHEQYLQSLENEAR 367
                 667888889999999999999988754 PP

>> Mating_N  Mating-type protein beta 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.28   1.7e+03      42      56 ..      24      38 ..      17      49 .. 0.82
   2 ?    0.5   0.2      0.11   6.6e+02      31      66 ..      50      86 ..      47      95 .. 0.87
   3 ?    7.5   0.4   0.00069       4.1      20      61 ..     353     393 ..     339     398 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.28
    Mating_N 42 awskfdellqschds 56
                +w++f+e ++s+ ++
  EPX72622.1 24 TWKTFREQVESHFQR 38
                599999999998765 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.11
    Mating_N 31 gesea.lstFlsawskfdellqschdsLseeTleliy 66
                g++++ ++ F +a ++    +++c+++L+++ +++i+
  EPX72622.1 50 GDNSSlFELFTTAMNAQLHEMEQCKKNLESDCRQKID 86
                788888999999999999999999*******999997 PP

  == domain 3  score: 7.5 bits;  conditional E-value: 0.00069
    Mating_N  20 alrkdFfssLrgesealstFlsawskfdellqschdsLseeT 61 
                 a+++++++sL++e ++ ++Fl+ ++k ++ll+  + +L++++
  EPX72622.1 353 AAHEQYLQSLENEARENKHFLNLIAKYSSLLEG-KRELDASA 393
                 6799**********99**************999.66887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (717 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1002  (0.0558871); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.63u 0.27s 00:00:00.90 Elapsed: 00:00:00.39
# Mc/sec: 5554.49
//
Query:       EPX72623.1  [L=489]
Description: glutamyl-tRNA synthetase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.5e-86  288.9   0.0    4.1e-47  160.6   0.0    2.2  2  tRNA-synt_1c    tRNA synthetases class I (E and Q), catalytic
     0.0032   16.0   0.2     0.0045   15.5   0.2    1.1  1  DUF3688         Protein of unknown function (DUF3688)
  ------ inclusion threshold ------
      0.026   14.5   0.2      0.072   13.1   0.2    1.8  1  Put_DNA-bind_N  Putative DNA-binding protein N-terminus


Domain annotation for each model (and alignments):
>> tRNA-synt_1c  tRNA synthetases class I (E and Q), catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.6   0.0   1.6e-40   9.3e-37       2      99 ..      32     137 ..      31     143 .. 0.97
   2 !  160.6   0.0   6.9e-51   4.1e-47     139     313 ..     146     321 ..     136     322 .. 0.94

  Alignments for each domain:
  == domain 1  score: 126.6 bits;  conditional E-value: 1.6e-40
                   -EEEE---SSSS-BHHHHHHHHHHHHHHHHTT-EEEEEE--SSCCC--HHHHHHHHHHHHHTT---S........SEEEEGGGGHHHHHHHHHHHHH CS
  tRNA-synt_1c   2 VrtRfaPePtGyLHiGhakaallnylfAknnnGkfilRieDTdperekeeaeesiledlkwlgikwd........ekptyqsdrfdelkkyaeeLik 90 
                   VrtRfaP+PtG+LH+G+ ++al+nyl+Ak+ nGkfi+R+eDTd++r +++ e+si++ l+  g++wd         +p++qs+r+ ++ +y+ +L++
    EPX72623.1  32 VRTRFAPSPTGFLHLGSLRTALFNYLWAKKCNGKFIVRLEDTDQKRIVHGSEQSIYDLLQTFGLQWDegpvsggpFGPYQQSKRLPIYLEYISQLLA 128
                   9**************************************************************************99******************** PP

                   TTSEEEE-S CS
  tRNA-synt_1c  91 kGkAYvcec 99 
                   +GkAY+ ++
    EPX72623.1 129 SGKAYKYYD 137
                   *****9765 PP

  == domain 2  score: 160.6 bits;  conditional E-value: 6.9e-51
                   STTTS-EEEESSBTTSSGGGSSTEEEEEEESGGG....SBTTTBTSTSEEE-HHHHHHHHHHHTT-SEEEEEGGGGCCHHHHHHHHHHTT-S.-EEE CS
  tRNA-synt_1c 139 aegekavvRlkideessvefrDlvrgriklepqe....ihdlvivksdiyPtYdfavvidDaleeithvlrteefldntpkyiwllealglevppfi 231
                     ++++vvR+ ++e ++  f D v+g+i ++++      +d+vi ksd+yPtY+fa+v+dD+l++ithv+r+ee++ +tpk+i l++a+++++p++ 
    EPX72623.1 146 TGKKPYVVRFCSQEGAT-SFVDTVYGKITIKSNTpkvlSDDFVILKSDGYPTYHFANVVDDHLMGITHVIRGEEWIPSTPKHIQLYKAFQWQPPTYS 241
                   55789*****9888876.************998888766********************************************************** PP

                   EEE--EEETTSB-SHHHHHHHHHTTSSSSTT-TTSCBHHHHHHCTB-HHHHHHHHHHHCCCSSS.EEEEHHHHHHHHHHHHH CS
  tRNA-synt_1c 232 heylrlnlekkklSKRklsllvdekqvkewddlreallnflrrlGwtpekerelftreeliksfdlnresksleafdrkkLe 313
                   h++l++n +++klSKR+++    +  + e ++ ++a+lnfl+++Gw+  +  ++++  +l+++f+++r++k   ++  +kL+
    EPX72623.1 242 HIPLLTNPDGSKLSKRQNDAH--VTSLLERGYEPMAILNFLALMGWSSRQTSDIIHLPQLMEIFSIDRLTKGSCIVALEKLQ 321
                   ********************9..788999********************************************999999997 PP

>> DUF3688  Protein of unknown function (DUF3688)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.2   7.6e-07    0.0045     429     489 ..     306     364 ..     296     397 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 7.6e-07
     DUF3688 429 dnlqydtvlvnffalklqnfnnillienindklqfdkllnsmfkisqkfytnylrtifdle 489
                 d l   + +v +   klq +n+  l e ind +q+d++   m k+ ++ ytn l  i d +
  EPX72623.1 306 DRLTKGSCIVAL--EKLQFLNKHYLRERINDPVQLDQITVEMQKVLREKYTNSLARISDSD 364
                 555555555543..4899************************************9998854 PP

>> Put_DNA-bind_N  Putative DNA-binding protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.2   1.2e-05     0.072       7      26 ..     113     132 ..     109     134 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.2e-05
                     HHHHHHHHHHHHHHHHTT-- CS
  Put_DNA-bind_N   7 ikRLplYlryLeelkeegve 26 
                      kRLp+Yl+y+++l ++g+ 
      EPX72623.1 113 SKRLPIYLEYISQLLASGKA 132
                     69**************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (489 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       446  (0.0248759); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.37
# Mc/sec: 3956.02
//
Query:       EPX72624.1  [L=207]
Description: GTPase Ypt71 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.4e-53  180.0   0.1    2.9e-53  179.8   0.1    1.0  1  Ras          Ras family
    1.8e-34  118.5   0.4    2.7e-34  118.0   0.4    1.2  1  Roc          Ras of Complex, Roc, domain of DAPkinase
      3e-13   49.6   0.0    3.4e-13   49.4   0.0    1.0  1  Arf          ADP-ribosylation factor family
    1.7e-07   31.3   0.0    2.5e-07   30.8   0.0    1.2  1  MMR_HSR1     50S ribosome-binding GTPase
    2.9e-07   30.2   0.0    1.8e-05   24.4   0.0    2.1  2  GTP_EFTU     Elongation factor Tu GTP binding domain
    0.00031   20.2   0.0    0.00033   20.1   0.0    1.2  1  Gtr1_RagA    Gtr1/RagA G protein conserved region
    0.00078   19.4   0.1      0.011   15.6   0.0    2.3  3  RsgA_GTPase  RsgA GTPase
     0.0018   17.7   0.0     0.0025   17.3   0.0    1.3  1  SRPRB        Signal recognition particle receptor beta subuni
     0.0044   16.5   0.0       0.15   11.4   0.0    2.2  2  TniB         Bacterial TniB protein
     0.0048   17.2   0.0      0.011   16.0   0.0    2.0  1  AAA_22       AAA domain
     0.0078   15.5   0.3      0.013   14.8   0.0    1.4  2  Septin       Septin
  ------ inclusion threshold ------
      0.016   15.1   0.2      0.037   13.9   0.0    1.6  2  ATPase_2     ATPase domain predominantly from Archaea
      0.017   14.7   0.0      0.039   13.5   0.0    1.5  1  AAA_7        P-loop containing dynein motor region
       0.02   15.3   0.0      0.042   14.2   0.0    1.6  1  AAA_16       AAA ATPase domain
      0.025   13.7   0.1      0.033   13.4   0.1    1.4  1  G-alpha      G-protein alpha subunit
      0.031   14.0   0.2      0.055   13.2   0.0    1.5  2  AAA_24       AAA domain
      0.035   14.0   0.0      0.071   13.0   0.0    1.4  1  NACHT        NACHT domain
      0.043   14.3   0.6       0.14   12.7   0.6    1.8  1  ABC_tran     ABC transporter
      0.044   13.5   0.1      0.094   12.5   0.1    1.9  1  PduV-EutP    Ethanolamine utilisation - propanediol utilisati
      0.052   13.2   0.0       0.11   12.1   0.0    1.6  1  ATP-synt_ab  ATP synthase alpha/beta family, nucleotide-bindi
      0.058   13.0   0.0      0.078   12.6   0.0    1.4  1  cobW         CobW/HypB/UreG, nucleotide-binding domain
      0.077   12.1   0.0       0.13   11.4   0.0    1.4  1  DAP3         Mitochondrial ribosomal death-associated protein
       0.12   12.8   0.1       0.27   11.7   0.0    1.7  1  AAA          ATPase family associated with various cellular a
       0.12   11.5   0.1       0.18   11.0   0.1    1.3  1  NB-ARC       NB-ARC domain
       0.15   11.6   0.1        1.2    8.7   0.1    2.2  1  FeoB_N       Ferrous iron transport protein B


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  179.8   0.1     4e-56   2.9e-53       1     160 [.      10     176 ..      10     178 .. 0.94

  Alignments for each domain:
  == domain 1  score: 179.8 bits;  conditional E-value: 4e-56
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeikr 99 
                 K+v++Gds+vGKt+l+++fv++kF++ey++Tig+df+tk++ +dgk+v+l++wDTAGqe+f+sl  ++yr+a+++++vy+++++++fe+v++w +e+  
  EPX72624.1  10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVIIDGKTVTLQLWDTAGQERFQSLGMAFYRGADCCVIVYNVNNAKTFESVENWKQEFLL 108
                 9***********************************************************************************************987 PP

                 HST...TTSEEEEEEETTTGGG.G-SS-HHHHHHHHHHHT...SEEEEEBTTTTCTHHHHHHHHHHHH CS
         Ras 100 vae...envpivLvGnKvDlee.kravsteegeelakelg...lkfletSAktnenveeafeellrei 160
                 +++   +++pi++vGn++D +  kravs +++ +++k++    l+++etSAk+n nv  +fe++ r++
  EPX72624.1 109 QTSqdeSTFPIIVVGNQIDKDPsKRAVSLNRALAYCKSKRespLPHFETSAKENSNVAALFEQVSRHA 176
                 77767788***********98559***********977655579*******************99986 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.0   0.4   3.7e-37   2.7e-34       1     120 []      10     128 ..      10     128 .. 0.88

  Alignments for each domain:
  == domain 1  score: 118.0 bits;  conditional E-value: 3.7e-37
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE...GHHHHCHH CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd...srssenlk 96 
                 Kvv++GdsgvGKt+l+++fv++kfs+++k+tig+dfltk+v  i+g       k+v+l++WDtaGqerf+sl   ++r+a+++++vy+   ++++e+++
  EPX72624.1  10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVI-IDG-------KTVTLQLWDTAGQERFQSLGMAFYRGADCCVIVYNvnnAKTFESVE 100
                 9**************************************983.554.......689*******************************976667899*** PP

                 HHHHHHHHHCSSS....-EEEEEE-TTT CS
         Roc  97 eWlkelkkvagks....pvilvgnkiDl 120
                 +W +e+  +++++    p+i+vgn+iD+
  EPX72624.1 101 NWKQEFLLQTSQDestfPIIVVGNQIDK 128
                 ****985544322225699*******95 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.4   0.0   4.7e-16   3.4e-13      15     173 ..       9     174 ..       1     176 [. 0.83

  Alignments for each domain:
  == domain 1  score: 49.4 bits;  conditional E-value: 4.7e-16
                 EEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSSEE..EEEEEE..TTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHHHHHHC CS
         Arf  15 lrilllGLDnaGKtTilkklkleelvt.tvPTigfn..veelei..knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkall 108
                 +++++lG  + GKt +++++ ++++++  + Tig +  ++++ i  k++++++wD  Gqe+  +l   +++  d  + v  +++ + +e+ ++  +++l
  EPX72624.1   9 VKVVILGDSGVGKTCLMNQFVNQKFSReYKATIGADflTKDVIIdgKTVTLQLWDTAGQERFQSLGMAFYRGADCCVIVYNVNNAKTFESVENWKQEFL 107
                 79*******************999976488999965116666667799**************************9888888888888877766555543 PP

                 .T.SGCCTTSEEEEEEE-TTSTTSS-HHHHHHHTTGGGSSSSSSEEEEEEBTTTTBTHHHHHHHHHH CS
         Arf 109 .e.eeelkevallvlaNKqDlpealseeelrellgleelkgkrkleiqkcsavkgeglkeglewlse 173
                  + +++ ++ +++v++N++D   +  +  l+++l+  + k + +l  +++sa +++++   +e++s+
  EPX72624.1 108 lQtSQDESTFPIIVVGNQIDKDPSKRAVSLNRALAYCKSKRESPLPHFETSAKENSNVAALFEQVSR 174
                 13134556899*************************99999999999*****999999999988875 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   0.0   3.4e-10   2.5e-07       1     111 [.      10     122 ..      10     125 .. 0.63

  Alignments for each domain:
  == domain 1  score: 30.8 bits;  conditional E-value: 3.4e-10
                 EEEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEETT..EEEEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEETTTTCSHHHHHHH CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvklkg..keielvDtpGliegaseekglgkaflaleeadlillvvdaseeklkpldeel 97 
                 +v+i+G + vGK+ L+n+ +++k   + k+    d  ++ v ++g    ++l+Dt+G  e   + ++lg af +  ++ +i++ v+ + +++    e++
  EPX72624.1  10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVIIDGktVTLQLWDTAG-QE---RFQSLGMAFYRGADCCVIVYNVNNA-KTF----ESV 99 
                 699******************96655555544444444444444423679*******.55...4559******988777777777622.222....444 PP

                 HHHHHH.........TTSEEEEE CS
    MMR_HSR1  98 eellee.........akkplilv 111
                 e++++e         ++ p+i+v
  EPX72624.1 100 ENWKQEfllqtsqdeSTFPIIVV 122
                 55544444434433344455555 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0     0.033        24       4      26 ..       9      31 ..       6      48 .. 0.82
   2 !   24.4   0.0   2.5e-08   1.8e-05      66     191 ..      53     175 ..      30     178 .. 0.74

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.033
                EEEEEEESTTSSHHHHHHHHHHH CS
    GTP_EFTU  4 rnigiighvDhGKtTLtdrLlyk 26
                ++++i+g+   GKt+L+ + + +
  EPX72624.1  9 VKVVILGDSGVGKTCLMNQFVNQ 31
                6899*************998865 PP

  == domain 2  score: 24.4 bits;  conditional E-value: 2.5e-08
                 TCSSEEEEEEEESSSGGGHHHHHHHHHT-SEEEEEEETT.....TBSTHHHHHHHHHHHHTTTE..EEEEEESCGSTHHHHHHHHHHHHHHHHHHHHHH CS
    GTP_EFTU  66 etkkylinliDtPGHvdFskevirglrvlDgavlvvdav.....eGvepqteevlrlalkegvp..iivfiNKmDrlkaelkeiveevkqklsrkeekl 157
                 ++k+ +++l Dt G + F++   + +r +D++v+v  ++     e ve+  +e l + ++ +    iiv+ N +D+     ++ +  +++ l       
  EPX72624.1  53 DGKTVTLQLWDTAGQERFQSLGMAFYRGADCCVIVYNVNnaktfESVENWKQEFLLQTSQDESTfpIIVVGNQIDKDP---SKRAVSLNRAL------A 142
                 699999*********************************55555558888888888888777656699999*999863...33444444444......2 PP

                 HHHHHTTTTTEEEEEEBTTTTBTHHHHHHHHHHH CS
    GTP_EFTU 158 ekygekgekevpvvfgSalkgegvktllealvel 191
                   +  k+e+  p + +Sa+++ +v +l+e++ ++
  EPX72624.1 143 YCK-SKRESPLPHFETSAKENSNVAALFEQVSRH 175
                 222.2333578******************99887 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   4.6e-07   0.00033       1      82 [.      10      88 ..      10     183 .. 0.72

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 4.6e-07
   Gtr1_RagA  1 kvLLmGksgsGKts.mrsiiFdnylardtlrlgatidveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliy 82
                kv+++G sg GKt+ m++ + ++++ +   ++ga   ++k+ +   + +tl+lwD  Gqe+f+   +   +     ++ v++y
  EPX72624.1 10 KVVILGDSGVGKTClMNQFVNQKFSREYKATIGADF-LTKDVIIDGKTVTLQLWDTAGQERFQSLGMAFYR---GADCCVIVY 88
                899***********5566677777766666676655.444445467789************9987543332...334455555 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   1.5e-05     0.011     102     122 ..      11      31 ..       4      50 .. 0.87
   2 ?   -0.6   0.0       1.5   1.1e+03      68      97 ..      74     103 ..      54     116 .. 0.73
   3 ?    1.2   0.0      0.42     3e+02      47      96 ..     117     171 ..      68     177 .. 0.54

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 1.5e-05
                  EEEECSTTSSHHHHHHHHCTT CS
  RsgA_GTPase 102 svlvGqSGvGKStLinallpe 122
                  +v++G SGvGK+ L+n+++++
   EPX72624.1  11 VVILGDSGVGKTCLMNQFVNQ 31 
                  689**************9886 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 1.5
                  HHHHHHHTTSEEEE--TTTHTTHHHHHHHC CS
  RsgA_GTPase  68 lkeelealgyevllvsaktkegleelkell 97 
                   ++ ++ +++ v++ ++++ +++e+++++ 
   EPX72624.1  74 GMAFYRGADCCVIVYNVNNAKTFESVENWK 103
                  456788889999999999999888888765 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.42
                  -EEEEEEE-GGG--HHH.....HHHHHHHHHHHTTSEEEE--TTTHTTHHHHHHH CS
  RsgA_GTPase  47 iepvivlnKiDlleeee.....eleelkeelealgyevllvsaktkegleelkel 96 
                   ++++v n iD   +++     ++ ++ +  ++  ++ + +sak+++++++l e+
   EPX72624.1 117 FPIIVVGNQIDKDPSKRavslnRALAYCKSKRESPLPHFETSAKENSNVAALFEQ 171
                  2344444666666555555444444444555555566666666666666666655 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   3.5e-06    0.0025       5     136 ..      10     140 ..       7     181 .. 0.80

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 3.5e-06
                 EEEEE-STTSSHHHHHHHHHHSS---B---S..S-EEETTG....GGTT-SEEEETT-GCCSHHHHHHHHHHGGEEEEEEEEETTS-HHHHHHHHHHHH CS
       SRPRB   5 avllvGlsdsGKTslftrLttdsvkktvtSq..essaalkv.ksekgskltliDfPGheklrqklleklkaksslkglvfvvDStidpkevkevAElly 100
                 +v+++G s  GKT l+++  ++++ + + +   +  ++++v  + k  +l+l D  G+e++++ l   +   +    +v+ v      k  ++v  +  
  EPX72624.1  10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATigADFLTKDViIDGKTVTLQLWDTAGQERFQS-LGMAFYRGADCCVIVYNVNN---AKTFESVENWKQ 104
                 689*****************99888777655466667777756778889999********965.66666677779999999875...588888888889 PP

                 HHHHHHHHHTT---EEEEEE-TTSTT---HHHHHHH CS
       SRPRB 101 eilliteklkdavdiliACnKqelflakspklikda 136
                 e ll+t + + + +i++  n+ +   +k +  +  a
  EPX72624.1 105 EFLLQTSQDESTFPIIVVGNQIDKDPSKRAVSLNRA 140
                 999999999999999999998887776666555544 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.0   0.00021      0.15      37      62 ..      10      35 ..       2      52 .. 0.82
   2 ?    3.2   0.0     0.071        51      36      83 ..      82     132 ..      64     177 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00021
        TniB 37 nlllvGdsnnGKtmivekFarlhppe 62
                +++++Gds +GKt ++++F +++ ++
  EPX72624.1 10 KVVILGDSGVGKTCLMNQFVNQKFSR 35
                689****************9987544 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.071
        TniB  36 pnlllvGdsnnGKt.mivekFarlhppekdedaekvpvlvv..qappkpde 83 
                  ++++v + nn Kt   ve+++++   ++++d++++p++vv  q+ + p++
  EPX72624.1  82 DCCVIVYNVNNAKTfESVENWKQEFLLQTSQDESTFPIIVVgnQIDKDPSK 132
                 588999999999994478999999999999****99999983334444444 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   1.6e-05     0.011       9      38 ..      12      46 ..      10     183 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.6e-05
      AAA_22  9 vvtGesGtGKTtllrrlleqldeeakaee.....e 38
                v+ G sG+GKT l++++++q+  +++ ++      
  EPX72624.1 12 VILGDSGVGKTCLMNQFVNQKFSREYKATigadfL 46
                899****************9876666655554441 PP

>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   1.8e-05     0.013       5      52 ..       9      56 ..       5      67 .. 0.75
   2 ?   -3.3   0.0       6.1   4.4e+03      81     200 ..      95     115 ..      87     127 .. 0.44

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.8e-05
                EEEEEEEBTTSSCCCCCCTTSSSS------------------S-EEEE CS
      Septin  5 ftlmvvGesglGkttlintlfetdlieeekleeasekkkktveikkkk 52
                + +++ G+sg+Gkt l+n +++++  +e k +  ++  +k+v i+ k+
  EPX72624.1  9 VKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVIIDGKT 56
                57899*******************999976655555555555555444 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 6.1
                 CCHHHHHHHHHHHHHHHHHCTSS--SS-----EEEEEEEE-TTSSSS-HHHHHHHHHHTTTS-EEEEESSGGGS-HHHHHHHHHHHHHHHHHTT----- CS
      Septin  81 swepiveyideqfeeylreesklkRkkivDkRvHaclyfisPtghglkpldvelmkklsekvnliPviaKaDtltkeElkefKkkireeleeeeikiyk 179
                 ++e +                                                                                              
  EPX72624.1  95 TFESVE--------------------------------------------------------------------------------------------- 100
                 333332............................................................................................. PP

                 ---SSSS-SCCHHHHHHHHHH CS
      Septin 180 lpdeeededeeakelseklke 200
                       + ++e+  ++ + ++
  EPX72624.1 101 ------NWKQEFLLQTSQDES 115
                 ......223333333333344 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   5.1e-05     0.037      23      49 ..      11      37 ..       3      57 .. 0.87
   2 ?   -1.6   0.0       2.8     2e+03      61      61 ..     151     151 ..      87     188 .. 0.57

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 5.1e-05
    ATPase_2 23 yfiYGpegsGKtaLlkeiienledkdk 49
                ++i G  g+GKt L++++++++ + ++
  EPX72624.1 11 VVILGDSGVGKTCLMNQFVNQKFSREY 37
                79******************9966554 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 2.8
    ATPase_2  61 s 61 
                  
  EPX72624.1 151 P 151
                 2 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   5.4e-05     0.039      35      63 ..      10      38 ..       5      47 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 5.4e-05
       AAA_7 35 pvllvGptGtGKtviikdllkkldkekyl 63
                +v++ G++G+GKt+++++++++  +++y+
  EPX72624.1 10 KVVILGDSGVGKTCLMNQFVNQKFSREYK 38
                6899**************66655446665 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   5.9e-05     0.042      27     113 ..      11     131 ..       3     152 .. 0.52

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 5.9e-05
      AAA_16  27 vllsGesGvGKsslvrellr.alekd............ggiflrgkcdqlesaipysalaqalareellrqllde.................aesaele 95 
                 v++ G+sGvGK+ l++++ +  ++++            + + + gk++ l       +l++++ + e ++ l+ +                 ++  ++e
  EPX72624.1  11 VVILGDSGVGKTCLMNQFVNqKFSREykatigadfltkD-VIIDGKTVTL-------QLWDTAGQ-ERFQSLGMAfyrgadccvivynvnnaKTFESVE 100
                 799************988852455445555544333320.1233333333.......33333322.333333333333333333333333335555566 PP

      AAA_16  96 awrekleeala.............avpelag 113
                  w+++++ +++             +++++++
  EPX72624.1 101 NWKQEFLLQTSqdestfpiivvgnQIDKDPS 131
                 6655555555555555555555555555555 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   4.6e-05     0.033      20      79 ..       5      62 ..       1     191 [. 0.61

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 4.6e-05
                E..EEEEEEEESTTSSHHHHHHHHHHHCS----HHHHHC.CHHHHHHHHHHHHHHHHHHHH CS
     G-alpha 20 kkrevkllllGqseSGKsTilkqlkllykkgfseeelat.wraviqlnivrsiktileale 79
                k+  vk+++lG s+ GK+ +++q+    +++fs+e +at   +++ + ++ + kt+  +l 
  EPX72624.1  5 KRLFVKVVILGDSGVGKTCLMNQFV---NQKFSREYKATiGADFLTKDVIIDGKTVTLQLW 62
                45789*******************9...788999955554445555555555555544443 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   7.7e-05     0.055       3      22 ..       9      28 ..       7      59 .. 0.89
   2 ?   -3.0   0.0       7.2   5.2e+03      42      70 ..      92     121 ..      85     124 .. 0.54

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 7.7e-05
      AAA_24  3 lkiliyGpsgiGKTtlakel 22
                +k++i G+sg+GKT l++++
  EPX72624.1  9 VKVVILGDSGVGKTCLMNQF 28
                69****************99 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 7.2
      AAA_24  42 kfpdieswedfldevvel.aaeladyktlv 70 
                 + ++ es+e++++e+    +++++++ ++v
  EPX72624.1  92 NAKTFESVENWKQEFLLQtSQDESTFPIIV 121
                 334444566666555444455555555555 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0    0.0001     0.071       3      22 ..      11      30 ..      10      41 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 0.0001
                EEEEC-TTTCHHHHHHHHHH CS
       NACHT  3 vilqGeaGsGKTtLlqklal 22
                v++ G++G+GKT L+ +++ 
  EPX72624.1 11 VVILGDSGVGKTCLMNQFVN 30
                79**************9986 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.6   0.00019      0.14      13      37 ..      10      34 ..       7     192 .. 0.65

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 0.00019
                EEEEEESTTSSHHHHHHHHTTSS-- CS
                xxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 13 kvaivGenGaGKStLlkllagllkp 37
                kv+i+G++G GK+ L++ + ++   
  EPX72624.1 10 KVVILGDSGVGKTCLMNQFVNQKFS 34
                699*************998776544 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   0.00013     0.094       3      38 ..      10      47 ..       8     174 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00013
   PduV-EutP  3 killiGkvgsGKttLtqalkgeel..kYkktqaiefsd 38
                k++++G +g+GKt L++++ ++++  +Yk t   +f +
  EPX72624.1 10 KVVILGDSGVGKTCLMNQFVNQKFsrEYKATIGADFLT 47
                899*************9999988733588887777643 PP

>> ATP-synt_ab  ATP synthase alpha/beta family, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00015      0.11      16      95 ..      10     142 ..       9     182 .. 0.66

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00015
                  EEEEEESTTSSHHHHHHHHHHHSSTSSEEEEEE.....................................................ESEEHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....................................................xxxxxxxxxxxx RF
  ATP-synt_ab  16 rtlipgafgvGktvisqslskqsnsddaiiyvg.....................................................iGergnevaevl 60 
                  +++i+g++gvGkt ++++ ++q+ s+++   +g                                                         +n  +e+l
   EPX72624.1  10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGadfltkdviidgktvtlqlwdtagqerfqslgmafyrgadccvivynvnnaktFESVENWKQEFL 107
                  679******************98887533333334666666666677777777777777777777777777777777666664443222233333333 PP

                  HHCHHSSGGGGEEEEEEETTS-HHHHHHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab  61 eefpegtimkrtvlvantsnepvaareasiytgit 95 
                   ++ +++     ++v n+ ++ + +r  s   +++
   EPX72624.1 108 LQTSQDESTFPIIVVGNQIDKDPSKRAVSLNRALA 142
                  33333445555566666666666666666665555 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   0.00011     0.078       3      66 ..      11      87 ..       9     141 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00011
                EEEEESTTCCHHHHHHHHH.CT--SS-EEEEESS-SS..CHCCCCCC.........HCCCT......EEEETTTTECCHCT CS
        cobW  3 tvltGflGsGKTtLlnhll.enraglklavivNefge..vsiDaell.........retgve.....ivelenGciCctlr 66
                +v+ G  G GKT L+n+ + ++ + +  a i  +f +  v iD++ +         +    e      + +  G  Cc + 
  EPX72624.1 11 VVILGDSGVGKTCLMNQFVnQKFSREYKATIGADFLTkdVIIDGKTVtlqlwdtagQ----ErfqslGMAFYRGADCCVIV 87
                6899999************55556666789999996444889999996666644331....24444477788888888854 PP

>> DAP3  Mitochondrial ribosomal death-associated protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00018      0.13      19      45 ..       4      30 ..       1      37 [. 0.83

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00018
                SSS---EEEEE-SSSSSTTTTHHHHHH CS
        DAP3 19 kkkkvkrlvltGekgsGKSvlLlqala 45
                +k+  +++v+ G+ g+GK+ l++q + 
  EPX72624.1  4 QKRLFVKVVILGDSGVGKTCLMNQFVN 30
                566679******************986 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00037      0.27       2     114 ..      12     128 ..      11     143 .. 0.61

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00037
                 EEESSTTSSHHHHHHHHHHH.HTHEEEEEETTTCSSS.............STTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHH CS
         AAA   2 llyGppGtGKTllakavake.lgvefleisgsellsk.............yvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervv 86 
                 ++ G  G+GKT l+++ +++ +++e+  + g+++l k             +  +++++++ l  +  + a  +++++ ++ +  + +     ++e+  +
  EPX72624.1  12 VILGDSGVGKTCLMNQFVNQkFSREYKATIGADFLTKdviidgktvtlqlWDTAGQERFQSLGMAFYRGA-DCCVIVYNVNNAKTFE-----SVENWKQ 104
                 6889**********99888856777777777777744444444444333344444444444444444443.5777777777765544.....4444445 PP

                 HHHHHHHHHTTTSSSTEEEEEEESSGGG CS
         AAA  87 nqLlteldgvkkkeskvivigatnrpdk 114
                 + Ll+  +++++    + +i+++n++dk
  EPX72624.1 105 EFLLQTSQDEST----FPIIVVGNQIDK 128
                 555554444444....778888887665 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   0.00024      0.18      23      51 ..      11      37 ..       1      59 [. 0.82

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00024
                EEEEESTTSSHHHHHHHHCCSHCCCCCCB CS
      NB-ARC 23 valvGmgGvGKttlakqilnksdevegrF 51
                v + G  GvGKt l++q +n+  +  +++
  EPX72624.1 11 VVILGDSGVGKTCLMNQFVNQ--KFSREY 37
                6789*************9998..555555 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.1    0.0017       1.2       2      24 ..      10      32 ..       9     172 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0017
                EEEEEESTTSSHHHHHHHHHTTS CS
      FeoB_N  2 tvalvGnpnvGkttlfnaltgak 24
                +v+++G+  vGkt l+n+  ++k
  EPX72624.1 10 KVVILGDSGVGKTCLMNQFVNQK 32
                7999*************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       768  (0.0428356); expected 358.6 (0.02)
Passed bias filter:                      587  (0.0327403); expected 358.6 (0.02)
Passed Vit filter:                       106  (0.00591221); expected 17.9 (0.001)
Passed Fwd filter:                        25  (0.00139439); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              25  [number of targets reported over threshold]
# CPU time: 0.48u 0.30s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 1547.62
//
Query:       EPX72625.1  [L=389]
Description: hypothetical protein SOCG_00388 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (389 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       448  (0.0249875); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.21s 00:00:00.64 Elapsed: 00:00:00.37
# Mc/sec: 3183.83
//
Query:       EPX72626.1  [L=444]
Description: sphingolipid biosynthesis protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   5.6e-121  404.4  29.8     7e-121  404.1  29.8    1.1  1  Serinc    Serine incorporator (Serinc)


Domain annotation for each model (and alignments):
>> Serinc  Serine incorporator (Serinc)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  404.1  29.8  3.9e-125    7e-121      11     429 .]      30     442 ..      21     442 .. 0.88

  Alignments for each domain:
  == domain 1  score: 404.1 bits;  conditional E-value: 3.9e-125
      Serinc  11 ccsscpsiksststRiayalllllssivsvimlsptvekklkkl......vlCkqaeaseeCegysaVyRvcfalalfflllallligvksskdpRaai 103
                 ++s ++ i+ss+ + i ya+l+ll+s++s++mls+++++kl+kl      + C+   ++++C+ ++aV+R++fal++f++l+a++l   +s++ +  +i
  EPX72626.1  30 LLSLTNYIQSSVGAIISYAVLYLLNSLLSWCMLSSWFNNKLSKLsagyleFGCQ---DDGKCYSVLAVHRLSFALVMFHCLFAFILSLSNSRSAVATKI 125
                 556667899**********************************65555432577...889*************************************** PP

      Serinc 104 qngfWflKlllllglvvlaffipnefflevw.nyvglvgaflFiliqlvLLvDfahswneswvekaeesesklwyaaLllvtlllyllaialvvllfvf 201
                 qn++W +K++l+++l+v++ffip++f+ ++w n+++++g+++Fi+ +l+LLvDfah+w+e++ve++  ++s+  ++ L+++t+++y++a+ l++l +v+
  EPX72626.1 126 QNSMWPFKIILWILLIVASFFIPTSFM-SFWgNVLSVIGSAFFIVYGLLLLVDFAHTWAEKCVERVLVTDSTSSKFSLIGSTVGMYIIALLLTILAYVY 223
                 *************************66.6**************************************9999**************************** PP

      Serinc 202 fassgCslnkffislnlilcvvvsvvsilpkvqeanprsgLlqssvvslYvtYLtwsalssepddkecnpllssslegtetasvvigliltflcvlYst 300
                 f++s+Cs+n++++++n++lc++vs++s++p+vqe+nprsgL+q+s+v++Y+ YL++sal+++pd+ +cnp   s  +gt++ s vig+++tfl+++Ys+
  EPX72626.1 224 FCASSCSFNQAINTINFLLCIAVSCLSVHPTVQEYNPRSGLAQASMVTCYTSYLILSALANRPDEGKCNPWSGSA-TGTREFSKVIGAAFTFLTIVYSA 321
                 ***************************************************************9999****9888.69********************* PP

      Serinc 301 lraasssqveklr.alkaaeeegalpesaleeeeeeeeekekeeeekkvlddekegvsYsYsfFhfvfflaslYvmmllTnW....ispe.eaelekvl 393
                 lra s s++++       ++++ + ++s          e++ e    +  d  + + +Y+Y++Fh++f+la++Y+  llTnW      +e +++  +v+
  EPX72626.1 322 LRAVSGSDKNEDYdFFYGDSNNFSRERSL---------ETQFE----DDNDLSNFKSNYNYIWFHVIFILAACYTGSLLTNWntmdL-YEdKKNDVFVR 406
                 ****9966555443332222222222221.........11222....22455678899************************88531.23345558999 PP

      Serinc 394 vgsswaavWvkivssWvcllLYlWtLvAPlvlpdrd 429
                 +g s+aavWvki++sW+c+l+Y+Wt++AP+++p r+
  EPX72626.1 407 IGFSYAAVWVKILTSWICHLMYAWTCLAPIFFPYRF 442
                 *********************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (444 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       933  (0.0520386); expected 358.6 (0.02)
Passed bias filter:                      276  (0.0153941); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 3156.67
//
Query:       EPX72627.1  [L=718]
Description: noc complex subunit Noc2 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.4e-104  348.8   3.5   4.9e-104  347.8   3.5    1.6  1  Noc2      Noc2p family
  ------ inclusion threshold ------
       0.38   11.4   4.9        1.1    9.9   4.9    1.7  1  Pex14_N   Peroxisomal membrane anchor protein (Pex14p) conser


Domain annotation for each model (and alignments):
>> Noc2  Noc2p family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  347.8   3.5  5.5e-108  4.9e-104       2     298 ..     368     668 ..     367     669 .. 0.98

  Alignments for each domain:
  == domain 1  score: 347.8 bits;  conditional E-value: 5.5e-108
        Noc2   2 llelvlkkvYlalvknskftsvktlplinfmknsaveLygldeavsyqhafvyIrqLAihLRnalktkkkeayksvynWqfvhsldlWsrvlsaacsk. 99 
                 lle+++k++Yl++++ s  t+v+tl  infmkns +++++l+++++y +af yIrqLAi+LRn++++ k e+ k v +W +vh++d+Wsr+ls+a+   
  EPX72627.1 368 LLEFAFKHMYLTMIRISSYTTVHTLAAINFMKNSCADIFLLNPESCYLIAFRYIRQLAITLRNTIHQPKPETRKLVQSWSYVHAIDFWSRLLSRATWLs 466
                 7899*******************************************************************************************9888 PP

        Noc2 100 ....keselkpLiypLvqvilgaikLiptaryfPlrlhlirsLlrLsestgtfIPvaplllevLeskelkkkpkkkstlkpldfevtlkvpksylktrv 194
                        e+++L+ypLvq++lg+i   p+++++P+r+hl rsL+ Ls++tg+fIP+ap+l++vL+s el++kpk+ stlkpld+ev +++p++yl+trv
  EPX72627.1 467 rekgLAVEMQSLVYPLVQIALGVITTSPSSQMYPMRFHLSRSLIYLSRHTGVFIPMAPVLFDVLDSPELSRKPKP-STLKPLDWEVEIRAPTAYLRTRV 564
                 88888899*******************************************************************.9********************** PP

        Noc2 195 yqdglieevvellleylallsksiaFPElvlpvvvqLkrflkstkneklrkqlkqLvekleenskfieekRekvefspkdreeveafekelksektPlg 293
                 yqdg+ ++++ell ey++l+++++aFPE+v+p++v+ krf k++kn kl+++l +Lv+kle++s+f+ ++R++ ++sp++ ++++af+++ ++ekt lg
  EPX72627.1 565 YQDGITNQLLELLGEYYVLYATNVAFPEFVIPAIVRAKRFAKRSKNVKLNRSLLTLVQKLEQQSEFVLSHRAQQKISPANLDSLDAFLANEEWEKTSLG 663
                 ****************************************************************************************9999******* PP

        Noc2 294 kyvks 298
                  yv  
  EPX72627.1 664 MYVVA 668
                 **986 PP

>> Pex14_N  Peroxisomal membrane anchor protein (Pex14p) conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   4.9   0.00012       1.1      31     116 ..      43     144 ..      40     156 .. 0.46

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00012
     Pex14_N  31 sKGLtqeEIeeaLkraereeease..........savaassas...eqaqeesasssatpqpqaasqtsqsspsps.....ppaqqqqqqy........ 103
                 +KGL+  E++e+L+++++e+ +se          +           e++ ++sa+s ++++p+++  +s++++s++     p++ q+            
  EPX72627.1  43 KKGLQ-NEVKELLNKSKTEPLSSEdedvtmddflN-------GdfdESSLDKSATSGKNTKPSEERRESAKESSQPkknikPKTVQE---Edessssde 130
                 68885.69*******88887777765444433320.......022222233333333333333222222222221111111111111...012234455 PP

     Pex14_N 104 .rpPivtypefltk 116
                       +y e+l +
  EPX72627.1 131 eEVDAEQYREQLDS 144
                 55566777776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (718 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1653  (0.092197); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.27s 00:00:00.95 Elapsed: 00:00:00.45
# Mc/sec: 4846.28
//
Query:       EPX72628.1  [L=593]
Description: Swi5 complex subunit Swi2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.037   13.9   0.2      0.037   13.9   0.2    3.1  4  Mei5      Double-strand recombination repair protein


Domain annotation for each model (and alignments):
>> Mei5  Double-strand recombination repair protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.2      0.08   1.4e+03      59     102 ..      41      82 ..      30     168 .. 0.66
   2 ?   -3.1   0.0      0.34   6.1e+03      75      95 ..     199     219 ..     194     237 .. 0.51
   3 ?   -1.1   0.0     0.082   1.5e+03       4      34 ..     418     448 ..     416     455 .. 0.84
   4 ?   13.9   0.2   2.1e-06     0.037     127     206 .]     483     583 ..     480     583 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.08
                 XXXXXXXXXXXX..XXXXX......XXXXXXXXXXXXXXXXXXX CS
        Mei5  59 ssekatsskeenqlqqsikildseeeeskllkstiknrdvckse 102
                 s ++a+ s ee +lq+ ++  +s +e  + +k +++nr  +k  
  EPX72628.1  41 SYKPASDSYEEPSLQDVCS--ESIKETGRRIKGISRNRVCPKEP 82 
                 4444555555555566666..55557788888888888777765 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 0.34
                 XXX......XXXXXXXXXXXX CS
        Mei5  75 sikildseeeeskllkstikn 95 
                 ++k++++e  +++ l++ i+ 
  EPX72628.1 199 NCKETSKEDSDNEALRNGIQS 219
                 445444444444444444443 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 0.082
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        Mei5   4 PdkrdtpsskkkkssgKqplsktlkerLkkt 34 
                 P  ++   sk+++   Kq l k+++ + kk 
  EPX72628.1 418 PSVSNLFASKNSNYRTKQALFKPFRPPFKKD 448
                 66667778999999***********999986 PP

  == domain 4  score: 13.9 bits;  conditional E-value: 2.1e-06
                 HHHHHHHHHHHHHHHHHHHHHHHHH--HH.HHHHHHHHHHHHHHHHHHHHHHHHH....................SSTTT---HHHHHHHTT--TTTS- CS
        Mei5 127 kLekqvrekeelLrrLklvkkyeskndls.eLqllikkwrnasqklleeLqkala....................esenkeltlteLidryglddkLlh 204
                 kL+ ++   ++++   +l++  e   +++  L  +i++wr ++q+++e+L+ +++                    +   k   +  +++++ ++ +Ll 
  EPX72628.1 483 KLQSEISTLQDQISVVELANDLENNQEDEmGLLEKIQRWRRSAQLAVEVLFPVFSlkfttmlqeipesvlpsvvdNLRSKPCNIGTFLEQLDIPFSLLN 581
                 9999****************999755443157889****************999977777777777777777766445567777777777777777777 PP

                 EE CS
        Mei5 205 yn 206
                 yn
  EPX72628.1 582 YN 583
                 76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (593 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       638  (0.0355848); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 4181.86
//
Query:       EPX72629.1  [L=314]
Description: SGT2 family TPR repeat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.2e-18   63.8   9.1      5e-06   26.1   0.0    4.1  5  TPR_1            Tetratricopeptide repeat
    9.4e-18   63.8   0.3    1.7e-17   62.9   0.3    1.5  1  SGTA_dimer       Homodimerisation domain of SGTA
    1.4e-17   62.3   4.7    8.8e-05   22.3   0.0    4.2  4  TPR_2            Tetratricopeptide repeat
    1.3e-15   56.2   7.2    0.00012   22.0   0.2    4.5  4  TPR_8            Tetratricopeptide repeat
    2.7e-12   46.2   7.8    1.8e-08   34.0   0.8    3.4  3  TPR_11           TPR repeat
    7.5e-12   44.8   4.7      4e-07   30.0   0.1    4.1  4  TPR_17           Tetratricopeptide repeat
    1.2e-10   41.3   3.6     0.0063   17.2   0.1    4.4  4  TPR_14           Tetratricopeptide repeat
    1.5e-08   35.1  13.5    2.8e-05   24.7   0.3    2.8  2  TPR_16           Tetratricopeptide repeat
    6.1e-08   32.2   2.0        0.4   10.8   0.1    3.7  3  TPR_7            Tetratricopeptide repeat
      7e-08   32.9   5.0     0.0013   19.2   0.1    3.1  2  TPR_19           Tetratricopeptide repeat
    5.5e-07   29.6   0.6     0.0063   16.6   0.0    2.4  2  TPR_9            Tetratricopeptide repeat
    7.1e-07   29.4   7.0    7.5e-06   26.1   2.3    3.1  3  TPR_12           Tetratricopeptide repeat
     0.0013   19.2   0.7      0.025   15.0   0.3    2.5  3  BTAD             Bacterial transcriptional activator domain
     0.0075   16.1   8.0      0.021   14.7   0.1    3.9  3  TPR_10           Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.032   14.8   5.4         23    5.9   0.3    4.0  3  TPR_6            Tetratricopeptide repeat
      0.049   14.3   2.2         11    7.0   0.0    2.5  2  TPR_4            Tetratricopeptide repeat
       0.05   12.5   0.7       0.46    9.3   0.2    2.0  2  NARP1            NMDA receptor-regulated protein 1
       0.11   12.9   3.1       0.19   12.2   0.2    2.5  3  Alkyl_sulf_dimr  Alkyl sulfatase dimerisation
       0.12   12.6   0.1        1.2    9.4   0.0    2.3  2  UMP1             Proteasome maturation factor UMP1
       0.16   11.9   0.2          3    7.7   0.2    2.1  2  Wzy_C_2          Virulence factor membrane-bound polymerase, 
        9.8    6.3  11.0       0.53   10.4   0.3    3.7  4  MIT              MIT (microtubule interacting and transport) 


Domain annotation for each model (and alignments):
>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       8.4   7.2e+03      20      33 ..      34      47 ..      34      47 .. 0.84
   2 ?   -2.7   0.3       7.2   6.1e+03      19      26 ..      59      66 ..      55      66 .. 0.78
   3 !   21.0   0.1   2.4e-07   0.00021       7      33 ..      90     116 ..      84     117 .. 0.89
   4 !   26.1   0.0   5.8e-09     5e-06       3      34 .]     120     151 ..     118     151 .. 0.95
   5 !   20.7   0.2   3.1e-07   0.00026       2      34 .]     153     185 ..     152     185 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 8.4
                HHHHHHHHHHHSTT CS
       TPR_1 20 AleyyekALelnPn 33
                A+++ +   ++nP+
  EPX72629.1 34 AVQCIKDSFKINPS 47
                78899989999996 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 7.2
                HHHHHHHH CS
       TPR_1 19 eAleyyek 26
                +A ++yek
  EPX72629.1 59 DAYDAYEK 66
                79999997 PP

  == domain 3  score: 21.0 bits;  conditional E-value: 2.4e-07
                 HHHHHHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1   7 lGnayfklgkydeAleyyekALelnPn 33 
                  Gn    +++y+ A++ y kA+el+P+
  EPX72629.1  90 QGNEAIAKKEYQGAVDLYTKAIELDPT 116
                 6999999*******************7 PP

  == domain 4  score: 26.1 bits;  conditional E-value: 5.8e-09
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   3 alynlGnayfklgkydeAleyyekALelnPnn 34 
                  + n+++ay +lg+y+ A+e+    L+++P++
  EPX72629.1 120 YYSNRAAAYSQLGQYESAVEDALTSLSIDPKH 151
                 69****************************86 PP

  == domain 5  score: 20.7 bits;  conditional E-value: 3.1e-07
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALelnPnn 34 
                 +a+ +lG a ++lg+   A ++y k Lel+P+n
  EPX72629.1 153 RAYGRLGRAKLSLGDAAAAADAYAKGLELDPSN 185
                 79*****************************98 PP

>> SGTA_dimer  Homodimerisation domain of SGTA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.9   0.3     2e-20   1.7e-17       3      62 ..       4      58 ..       2      63 .. 0.87

  Alignments for each domain:
  == domain 1  score: 62.9 bits;  conditional E-value: 2e-20
  SGTA_dimer  3 krlalaIidFLstslkdgtvseDdaESleVAiqCIaeaFevdkedkaavkkakfggqsLl 62
                k++a aIidFL++ +++++vs++++ESleVA+qCI+++F++++++  + +     g+ L 
  EPX72629.1  4 KNVATAIIDFLNQATTTNAVSDEEKESLEVAVQCIKDSFKINPSEIVSGS-----GKRLI 58
                99*****************************************9876665.....55555 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       7.4   6.4e+03      18      32 ..      32      46 ..      25      47 .. 0.81
   2 !   20.7   0.1   3.5e-07    0.0003       5      33 ..      88     116 ..      84     117 .. 0.90
   3 !   22.3   0.0     1e-07   8.8e-05       3      34 .]     120     151 ..     118     151 .. 0.95
   4 !   18.3   0.5     2e-06    0.0017       2      34 .]     153     185 ..     152     185 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 7.4
       TPR_2 18 eeAleafekAleldP 32
                e A+++ + + +++P
  EPX72629.1 32 EVAVQCIKDSFKINP 46
                679999999999999 PP

  == domain 2  score: 20.7 bits;  conditional E-value: 3.5e-07
       TPR_2   5 ynlGlayyklgdyeeAleafekAleldPn 33 
                  ++G+ ++++++y+ A++++ kA+eldP+
  EPX72629.1  88 KAQGNEAIAKKEYQGAVDLYTKAIELDPT 116
                 67899***********************8 PP

  == domain 3  score: 22.3 bits;  conditional E-value: 1e-07
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldPnn 34 
                 ++ n++ ay +lg+ye A+e+   +l++dP++
  EPX72629.1 120 YYSNRAAAYSQLGQYESAVEDALTSLSIDPKH 151
                 799***************************86 PP

  == domain 4  score: 18.3 bits;  conditional E-value: 2e-06
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleldPnn 34 
                 +a+ +lG+a + lgd + A++a+ k leldP n
  EPX72629.1 153 RAYGRLGRAKLSLGDAAAAADAYAKGLELDPSN 185
                 6899***************************87 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0      0.38   3.2e+02      14      33 ..      28      47 ..      26      48 .. 0.87
   2 !   11.5   0.1   0.00034      0.29       8      33 ..      91     116 ..      89     117 .. 0.89
   3 !   21.9   0.1   1.5e-07   0.00013       3      34 .]     120     151 ..     119     151 .. 0.95
   4 !   22.0   0.2   1.4e-07   0.00012       2      34 .]     153     185 ..     152     185 .. 0.96

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.38
                TT-HHHHHHHHHHHHHHHHH CS
       TPR_8 14 lgdyeeAkeyyekaleldpd 33
                ++ +e A+++++   +++p+
  EPX72629.1 28 KESLEVAVQCIKDSFKINPS 47
                678899************96 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 0.00034
                 HHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   8 gsiylklgdyeeAkeyyekaleldpd 33 
                 g+  + +++y+ A+  y ka+eldp+
  EPX72629.1  91 GNEAIAKKEYQGAVDLYTKAIELDPT 116
                 6667899*****************96 PP

  == domain 3  score: 21.9 bits;  conditional E-value: 1.5e-07
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyekaleldpdn 34 
                 +y n + +y++lg+ye+A+e     l++dp++
  EPX72629.1 120 YYSNRAAAYSQLGQYESAVEDALTSLSIDPKH 151
                 588999************************97 PP

  == domain 4  score: 22.0 bits;  conditional E-value: 1.4e-07
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldpdn 34 
                 +ay +lg++ l+lgd  +A  +y k leldp+n
  EPX72629.1 153 RAYGRLGRAKLSLGDAAAAADAYAKGLELDPSN 185
                 89*****************************86 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.0   0.8   2.1e-11   1.8e-08       1      42 []      91     132 ..      91     132 .. 0.97
   2 !   12.5   0.1    0.0001     0.085       3      42 .]     127     166 ..     127     166 .. 0.91
   3 !   11.1   0.5   0.00029      0.25       1      27 [.     159     185 ..     159     186 .. 0.95

  Alignments for each domain:
  == domain 1  score: 34.0 bits;  conditional E-value: 2.1e-11
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldPdnaeayynLGlayykqG 42 
                 G++  ++ +y +A+  Y kA++ldP+++  y+n+++ay ++G
  EPX72629.1  91 GNEAIAKKEYQGAVDLYTKAIELDPTSPVYYSNRAAAYSQLG 132
                 888899*********************************998 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 0.0001
      TPR_11   3 ayyeqGkyeeAieaYkkAlkldPdnaeayynLGlayykqG 42 
                 ay ++G+ye A+e+  + l +dP+  +ay  LG a + +G
  EPX72629.1 127 AYSQLGQYESAVEDALTSLSIDPKHSRAYGRLGRAKLSLG 166
                 6889*************************99998877666 PP

  == domain 3  score: 11.1 bits;  conditional E-value: 0.00029
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldPdn 27 
                 G+a  ++G+  +A  aY k l+ldP+n
  EPX72629.1 159 GRAKLSLGDAAAAADAYAKGLELDPSN 185
                 788999*******************99 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.1   4.7e-10     4e-07       1      33 [.     106     138 ..     106     139 .. 0.96
   2 !   11.8   0.0    0.0003      0.26       3      32 ..     142     171 ..     140     173 .. 0.92
   3 ?    2.5   0.0      0.27   2.3e+02       2      12 ..     175     185 ..     174     188 .. 0.87
   4 ?   -2.1   0.2       7.9   6.7e+03      17      28 ..     294     305 ..     293     310 .. 0.58

  Alignments for each domain:
  == domain 1  score: 30.0 bits;  conditional E-value: 4.7e-10
      TPR_17   1 lylkaleldPnnadaynnLAelllknGdlmtAr 33 
                 ly+ka+eldP++++ y n+A +++++G+++ A+
  EPX72629.1 106 LYTKAIELDPTSPVYYSNRAAAYSQLGQYESAV 138
                 7*****************************997 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 0.0003
      TPR_17   3 lkaleldPnnadaynnLAelllknGdlmtA 32 
                 l +l +dP+++ ay  L+++ l++Gd + A
  EPX72629.1 142 LTSLSIDPKHSRAYGRLGRAKLSLGDAAAA 171
                 7899**********************9877 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.27
      TPR_17   2 ylkaleldPnn 12 
                 y k leldP+n
  EPX72629.1 175 YAKGLELDPSN 185
                 99*******99 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 7.9
      TPR_17  17 nnLAelllknGd 28 
                 +nLA+ +++n +
  EPX72629.1 294 QNLARNFRNNQN 305
                 678877774443 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0       2.3     2e+03      18      34 ..      55      71 ..      51      73 .. 0.79
   2 !    9.3   0.0    0.0026       2.2      12      38 ..      95     121 ..      85     125 .. 0.84
   3 !   17.2   0.1   7.4e-06    0.0063       7      43 ..     124     160 ..     120     161 .. 0.95
   4 !   16.8   1.2     1e-05    0.0085       3      39 ..     154     190 ..     153     195 .. 0.91

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 2.3
      TPR_14 18 deAiallrralalaPdd 34
                ++ i++++++ +++P +
  EPX72629.1 55 KRLIDAYDAYEKQHPLE 71
                57799999999999965 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.0026
      TPR_14  12 lalGdpdeAiallrralalaPddaeaw 38 
                  a  ++++A++l+ +a++l+P++++++
  EPX72629.1  95 IAKKEYQGAVDLYTKAIELDPTSPVYY 121
                 567899****************99876 PP

  == domain 3  score: 17.2 bits;  conditional E-value: 7.4e-06
      TPR_14   7 laeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 +a+a+ +lG+++ A++ +   l+ +P++ +a+ +l++
  EPX72629.1 124 RAAAYSQLGQYESAVEDALTSLSIDPKHSRAYGRLGR 160
                 799********************************98 PP

  == domain 4  score: 16.8 bits;  conditional E-value: 1e-05
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddaeawl 39 
                 a+ +l++a l lGd ++A++++ + l+l+P+++++ +
  EPX72629.1 154 AYGRLGRAKLSLGDAAAAADAYAKGLELDPSNDVLKR 190
                 7779****************************99876 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.3   3.3e-08   2.8e-05       2      58 ..      89     143 ..      88     146 .. 0.94
   2 !   21.6   7.4   2.9e-07   0.00025       3      67 ..     124     185 ..     122     186 .. 0.94

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 3.3e-08
      TPR_16   2 alaraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAa.alyr 58 
                 a++++a++ ++y+ A+ +++ a+++dp sP+    + +++ a+ ++g ++ A+ +++ 
  EPX72629.1  89 AQGNEAIAKKEYQGAVDLYTKAIELDPTSPV---YYSNRAAAYSQLGQYESAVeDALT 143
                 79*****************************...******************977765 PP

  == domain 2  score: 21.6 bits;  conditional E-value: 2.9e-07
      TPR_16   3 laraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalraapda 67 
                 +a a+ ++g+y+ A++ + + l  d   P + +A+  lg+a l +g+ a+Aa++y++ l+ +p++
  EPX72629.1 124 RAAAYSQLGQYESAVEDALTSLSID---PKHSRAYGRLGRAKLSLGDAAAAADAYAKGLELDPSN 185
                 7899*********************...************************9999999999986 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0    0.0023         2      14      34 ..      99     117 ..      96     119 .. 0.87
   2 !   10.1   0.1   0.00082       0.7       2      20 ..     121     139 ..     120     149 .. 0.90
   3 !   10.8   0.1   0.00047       0.4       1      34 [.     154     185 ..     154     187 .. 0.94

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0023
       TPR_7  14 dyeeAielyeqsLaltkdped 34 
                 +y+ A++ly++  a++ dp+ 
  EPX72629.1  99 EYQGAVDLYTK--AIELDPTS 117
                 89*********..88888875 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00082
       TPR_7   2 LlnLarlysrlGdyeeAie 20 
                 ++n a +ys+lG+ye A+e
  EPX72629.1 121 YSNRAAAYSQLGQYESAVE 139
                 6899*************98 PP

  == domain 3  score: 10.8 bits;  conditional E-value: 0.00047
       TPR_7   1 aLlnLarlysrlGdyeeAielyeqsLaltkdped 34 
                 a+ +L+r+  +lGd + A++ y +  +l+ dp++
  EPX72629.1 154 AYGRLGRAKLSLGDAAAAADAYAK--GLELDPSN 185
                 799*********************..99999986 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.1   1.5e-06    0.0013       2      45 ..      95     138 ..      94     139 .. 0.94
   2 !   14.6   0.6   4.3e-05     0.036      16      58 ..     144     185 ..     139     195 .. 0.88

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 1.5e-06
      TPR_19   2 laegdyaeAlalleqalqedpknaearllLAeallalgqldeAe 45 
                 +a + y+ A++l+++a++ dp ++    + A a+ +lgq++ A 
  EPX72629.1  95 IAKKEYQGAVDLYTKAIELDPTSPVYYSNRAAAYSQLGQYESAV 138
                 78899*************************************97 PP

  == domain 2  score: 14.6 bits;  conditional E-value: 4.3e-05
      TPR_19  16 qalqedpknaearllLAeallalgqldeAealLdalpeedpdd 58 
                 + l+ dpk+++a  +L +a l+lg+ ++A ++ ++ +e dp +
  EPX72629.1 144 S-LSIDPKHSRAYGRLGRAKLSLGDAAAAADAYAKGLELDPSN 185
                 4.799********************************999984 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   7.4e-06    0.0063       5      51 ..      94     140 ..      92     143 .. 0.91
   2 !   10.8   0.3   0.00049      0.42      21      64 ..     144     187 ..     141     199 .. 0.90

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 7.4e-06
       TPR_9   5 aireedweralavverllllaPddpeerrdRGlllaqlGclsaAlad 51 
                 ai +++++ a   +   + l+P +p  +  R+ ++ qlG+++ A++d
  EPX72629.1  94 AIAKKEYQGAVDLYTKAIELDPTSPVYYSNRAAAYSQLGQYESAVED 140
                 567788888888889999***************************98 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00049
       TPR_9  21 llllaPddpeerrdRGlllaqlGclsaAladLeaylalapdapd 64 
                  l ++P++ + +   G++   lG+ +aA+++    l+l+p+++ 
  EPX72629.1 144 SLSIDPKHSRAYGRLGRAKLSLGDAAAAADAYAKGLELDPSNDV 187
                 5889************************************7655 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       2.3     2e+03      32      47 ..      60      74 ..      54      77 .. 0.65
   2 ?    3.8   0.0     0.082        70      59      74 ..      98     113 ..      87     116 .. 0.66
   3 !   26.1   2.3   8.8e-09   7.5e-06       6      76 ..     121     183 ..     115     184 .. 0.94

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 2.3
      TPR_12 32 iarrllGpdhpltatt 47
                ++  +++++hpl+at+
  EPX72629.1 60 AYD-AYEKQHPLEATS 74
                442.346889999987 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.082
      TPR_12  59 gryeeAlelleealai 74 
                 ++y+ A++l+++a+++
  EPX72629.1  98 KEYQGAVDLYTKAIEL 113
                 4566666666666665 PP

  == domain 3  score: 26.1 bits;  conditional E-value: 8.8e-09
      TPR_12   6 lnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealaiae 76 
                 ++n+aa++ +lg+y+ A e   ++l i      p+h   ++++  Lgr+ + lg+ ++A +++ + l++++
  EPX72629.1 121 YSNRAAAYSQLGQYESAVEDALTSLSID-----PKH---SRAYGRLGRAKLSLGDAAAAADAYAKGLELDP 183
                 569*************************.....999...9***************************9975 PP

>> BTAD  Bacterial transcriptional activator domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       4.4   3.8e+03      51      93 ..      24      69 ..      12      75 .. 0.47
   2 ?    1.4   0.0      0.46     4e+02       7      35 ..      85     113 ..      79     118 .. 0.77
   3 !   15.0   0.3     3e-05     0.025      66     121 ..     122     177 ..     119     186 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 4.4
                HHHHHHHHHHHHHHHHHHHH...HHHHTT-HHHHHHHHHHHHHHST CS
        BTAD 51 eaererleelrlealealae...aelrlGraeealaelealvaehP 93
                 +e ++  e +++++++ ++    e+  G  +++++ ++a  ++hP
  EPX72629.1 24 SDEEKESLEVAVQCIKDSFKinpSEIVSGSGKRLIDAYDAYEKQHP 69
                4444444444444444444433334444445555555555555555 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.46
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHTT CS
        BTAD   7 ealvaagraalaagdpeeaaelleaAlal 35 
                 e+ +a+g++a+a+ + ++a++l+ +A++l
  EPX72629.1  85 EKFKAQGNEAIAKKEYQGAVDLYTKAIEL 113
                 55677788888888888888888888765 PP

  == domain 3  score: 15.0 bits;  conditional E-value: 3e-05
                 HHHHHHHHHTT-HHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHTT-HHHHHHHHHH CS
        BTAD  66 ealaeaelrlGraeealaelealvaehPlrErlhrqlmrAlarsGrqaeALevYer 121
                   +a+a ++lG++e a++++   ++ +P + r++  l rA   +G+ a+A  +Y +
  EPX72629.1 122 SNRAAAYSQLGQYESAVEDALTSLSIDPKHSRAYGRLGRAKLSLGDAAAAADAYAK 177
                 5789999***********************************************86 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.1     0.094        80      16      30 ..      98     112 ..      89     114 .. 0.85
   2 !   14.7   0.1   2.5e-05     0.021       5      31 ..     121     147 ..     119     147 .. 0.92
   3 ?   -0.2   0.6       1.2     1e+03       4      29 ..     154     179 ..     152     181 .. 0.78

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.094
      TPR_10  16 grydeAealleeala 30 
                 ++y++A++l+ +a++
  EPX72629.1  98 KEYQGAVDLYTKAIE 112
                 789999999999997 PP

  == domain 2  score: 14.7 bits;  conditional E-value: 2.5e-05
      TPR_10   5 lnNLanalrqrgrydeAealleealai 31 
                 ++N a+a++q+g+y+ A++++  +l+i
  EPX72629.1 121 YSNRAAAYSQLGQYESAVEDALTSLSI 147
                 89******************9998876 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 1.2
      TPR_10   4 slnNLanalrqrgrydeAealleeal 29 
                 ++  L++a  ++g+ ++A + + + l
  EPX72629.1 154 AYGRLGRAKLSLGDAAAAADAYAKGL 179
                 67789999999999999988877665 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.1     0.027        23      14      33 .]      98     117 ..      83     117 .. 0.84
   2 ?    2.7   0.1      0.28   2.4e+02       6      23 ..     124     142 ..     122     146 .. 0.80
   3 ?    5.9   0.3     0.027        23       5      25 ..     157     177 ..     154     184 .. 0.92

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.027
                 HHHHHHHHHHHHHHHH-TT- CS
       TPR_6  14 gdtdkAlealerlikeYPdS 33 
                 ++++ A++++ + i+  P+S
  EPX72629.1  98 KEYQGAVDLYTKAIELDPTS 117
                 6999***********99987 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.28
                 HHHHHHHHHHHHHHHH.HH CS
       TPR_6   6 lalsyrklgdtdkAle.al 23 
                 +a +y +lg+++ A+e al
  EPX72629.1 124 RAAAYSQLGQYESAVEdAL 142
                 678999999*****99555 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.027
                 HHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   5 klalsyrklgdtdkAlealer 25 
                 +l+++ ++lgd+++A +a+ +
  EPX72629.1 157 RLGRAKLSLGDAAAAADAYAK 177
                 79******99********976 PP

>> TPR_4  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.0     0.013        11       2      21 ..     119     138 ..     118     139 .. 0.88
   2 ?    5.0   2.1     0.055        47       2      23 ..     153     174 ..     152     177 .. 0.87

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.013
       TPR_4   2 rallaLArallalGdldeAr 21 
                 + ++++A a+ +lG+++ A 
  EPX72629.1 119 VYYSNRAAAYSQLGQYESAV 138
                 6789************9986 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.055
       TPR_4   2 rallaLArallalGdldeAral 23 
                 ra+  L+ra l lGd+++A+++
  EPX72629.1 153 RAYGRLGRAKLSLGDAAAAADA 174
                 678889*************986 PP

>> NARP1  NMDA receptor-regulated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.2   0.00053      0.46     197     256 ..      87     148 ..      55     155 .. 0.79
   2 ?    1.5   0.0      0.12   1.1e+02      45      91 ..     159     207 ..     152     217 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00053
                 HHHHHHHHHT-SH..HHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHHHHHHHHHHHCT CS
       NARP1 197 flAqhydklgsre..kAleyidkaiehtptlvelyltKarilkhaGdlkkAaevmeearklD 256
                 f Aq  + + ++e   A+++  kaie +pt+  +y ++a  + + G+ + A+e + ++ ++D
  EPX72629.1  87 FKAQGNEAIAKKEyqGAVDLYTKAIELDPTSPVYYSNRAAAYSQLGQYESAVEDALTSLSID 148
                 6666666655544449***********************************99877776666 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.12
                 HHHHHHTT-HHHHHHHHHHHHHH-TT-CHHHHHHHHHT....SSS-HHH CS
       NARP1  45 aelllkLgrkeeAeatyeaLlernpenskYyeglekak..klskedeea 91 
                 ++  l Lg+ + A+ +y + le  p n    +gle+ak   +s++d+ea
  EPX72629.1 159 GRAKLSLGDAAAAADAYAKGLELDPSNDVLKRGLEAAKnqVNSSSDVEA 207
                 566789*******************************953133445554 PP

>> Alkyl_sulf_dimr  Alkyl sulfatase dimerisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.2   0.00022      0.19      53     121 ..      68     136 ..      52     141 .. 0.87
   2 ?   -2.3   0.0       6.7   5.7e+03      78     108 ..     161     192 ..     157     210 .. 0.68
   3 ?   -0.1   0.0       1.3   1.1e+03      46      78 ..     243     274 ..     237     285 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00022
                      --HHHHHHHHHHHTTSHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHHHHH-S CS
  Alkyl_sulf_dimr  53 lppeekakrlvelmGgaekvlekakealkegdyrwaaellnhlvfadpenaeakelkadaleqlgyqae 121
                      +p e++++ + +l  +aek  ++ +ea+++++y+ a+ l  ++++ dp+     + +a+a+ qlg+ ++
       EPX72629.1  68 HPLEATSSDTSNLKDEAEKFKAQGNEAIAKKEYQGAVDLYTKAIELDPTSPVYYSNRAAAYSQLGQYES 136
                      55556666666666688999999******************************************8765 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 6.7
                      HHHHTT-HHHHHHHHHHHHHHSTT-H.HHHHH CS
  Alkyl_sulf_dimr  78 ealkegdyrwaaellnhlvfadpena.eakel 108
                      ++l+ gd+ +aa    + ++ dp+n+   + l
       EPX72629.1 161 AKLSLGDAAAAADAYAKGLELDPSNDvLKRGL 192
                      56677888888888888888888875233333 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 1.3
                      -GGGTS---HHHHHHHHHHHTTSHHHHHHHHHH CS
  Alkyl_sulf_dimr  46 nPanLnplppeekakrlvelmGgaekvlekake 78 
                      nPa +n +++  ++  l++lm++  +++++a++
       EPX72629.1 243 NPAIMNMAQNMMQSGALNNLMSD-PNIANMARN 274
                      89999999999999999999995.467777766 PP

>> UMP1  Proteasome maturation factor UMP1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.0       1.1   9.6e+02      21      36 ..      64      79 ..      54      93 .. 0.68
   2 ?    9.4   0.0    0.0014       1.2       6      38 ..     184     216 ..     180     220 .. 0.88

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 1.1
        UMP1 21 lnssHpLesrlknwee 36
                 +++HpLe+  + +++
  EPX72629.1 64 YEKQHPLEATSSDTSN 79
                5789***998775443 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.0014
        UMP1   6 lhdtlraGlkslksqlnssHpLesrlknweetq 38 
                  +d l++Gl+++k+q+nss ++e+r + +e+ +
  EPX72629.1 184 SNDVLKRGLEAAKNQVNSSSDVEARGSTAEQPR 216
                 589**********************99888765 PP

>> Wzy_C_2  Virulence factor membrane-bound polymerase, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.2    0.0035         3     118     162 ..      92     137 ..      59     145 .. 0.79
   2 ?    2.0   0.0       0.2   1.7e+02     109     153 ..     151     195 ..     146     208 .. 0.89

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0035
     Wzy_C_2 118 llplspenlaaklalarklihlsPepavie.rlilslallGdedeA 162
                    + ++ ++  ++l+ k+i+l P+  v++ + + ++ +lG+ + A
  EPX72629.1  92 NEAIAKKEYQGAVDLYTKAIELDPTSPVYYsNRAAAYSQLGQYESA 137
                 455677889999*************9886538999*******9988 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.2
     Wzy_C_2 109 ayadllelgllplspenlaaklalarklihlsPepavierlilsl 153
                 +  ++++lg+++ls  ++aa  +++ k ++l P   v++r  +++
  EPX72629.1 151 HSRAYGRLGRAKLSLGDAAAAADAYAKGLELDPSNDVLKRGLEAA 195
                 5678999****************************9999987776 PP

>> MIT  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       2.6   2.2e+03       9      26 ..      20      37 ..      11      42 .. 0.63
   2 ?   10.4   0.3   0.00062      0.53      17      33 ..      97     113 ..      89     113 .. 0.91
   3 ?   -0.3   0.3       1.3   1.1e+03       9      25 ..     123     139 ..     120     140 .. 0.86
   4 ?   -0.3   0.2       1.4   1.2e+03      18      33 ..     166     181 ..     162     181 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 2.6
         MIT  9 kkAveeDnagnyeeAlel 26
                + Av  ++++  e A+++
  EPX72629.1 20 TNAVSDEEKESLEVAVQC 37
                456666666666666654 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00062
         MIT  17 agnyeeAlelYkealel 33 
                 +++y+ A++lY++a+el
  EPX72629.1  97 KKEYQGAVDLYTKAIEL 113
                 799************96 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 1.3
         MIT   9 kkAveeDnagnyeeAle 25 
                 ++A+ + + g+ye A+e
  EPX72629.1 123 NRAAAYSQLGQYESAVE 139
                 789999999****9986 PP

  == domain 4  score: -0.3 bits;  conditional E-value: 1.4
         MIT  18 gnyeeAlelYkealel 33 
                 g+ ++A ++Y ++lel
  EPX72629.1 166 GDAAAAADAYAKGLEL 181
                 78899********996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       711  (0.0396564); expected 358.6 (0.02)
Passed bias filter:                      523  (0.0291706); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                        22  (0.00122706); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              21  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2195.09
//
Query:       EPX72630.1  [L=662]
Description: DUF654 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.6e-78  263.1   1.4    6.8e-78  262.2   1.4    1.4  1  Tcf25           Transcriptional repressor TCF25
  ------ inclusion threshold ------
        1.6    9.3  22.0      0.042   14.4  14.9    2.0  2  IHABP4_N        Intracellular hyaluronan-binding protein 4 N-


Domain annotation for each model (and alignments):
>> Tcf25  Transcriptional repressor TCF25
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  262.2   1.4   7.5e-82   6.8e-78       1     350 []     236     544 ..     236     544 .. 0.94

  Alignments for each domain:
  == domain 1  score: 262.2 bits;  conditional E-value: 7.5e-82
       Tcf25   1 FkfekskeykeaqnlFlqlvdshDpealinllkkyPYHvdtLLqlsevyresedlevAndlieraLfalerafhisFhenllnltsgeirldyelveNR 99 
                 F++++s++y+e+q+ F   v+ +Dp++l+ ll+++P+H+dtLLq++e++ +++d+e   dli raLfa+++a+h++F     nl +g++rl++ +  NR
  EPX72630.1 236 FELTQSRAYQEVQETFEFYVQIYDPNNLFMLLRSHPFHIDTLLQVAEIIDQQGDHELPVDLIARALFAFDSALHPKF-----NLATGNARLPFLFPTNR 329
                 78899************************************************************************.....***************** PP

       Tcf25 100 alflalfrhilslerrgctrTaleiaKlllsldpaeDplgillfiDflalksneyefLiklseefeiqrvqsvllfelselpnfafslaLalylkenkk 198
                  l+l+++r+++sl++rgc+rT +e++K+ll+ldp  Dp++i  +iD +a++ +e+ + +++++ +e+++       + +++pnf +s aLa+y     k
  EPX72630.1 330 RLYLCIWRYMQSLQSRGCWRTVFEFCKVLLQLDPS-DPYAIGTCIDTYAIRRGEFGWVVYFANYLENTN-------QITKFPNFFYSSALAMY-----K 415
                 **********************************9.*******************************99.......88999************.....7 PP

       Tcf25 199 klslsekakeaLqrAllrfPsvlqlLleklnvkttvkvtseslfkdssessfseeeelellqklYlersnilwkeeevitwLesevaelhellkdkkry 297
                  + ++e+ + ++  A+ r P +l +Lle + +  + ++t            + ++   el ++lY+ r+++ w +++v+t+L++ +++ + +l++   +
  EPX72630.1 416 MYGDTEETRITILAAIERAPFMLGKLLESVRLPLN-QLT----------IPEPKDPVQELNSELYAMRAHDNWASPDVLTFLQTILKTEKFTLNA---V 500
                 9*****************************99998.444..........345568899999*************************555555555...3 PP

       Tcf25 298 seekpaakeahskldiniyrhvivselkslnallPdeimeknrsvlefDplpP 350
                 + +        s+++ n++rh+i+ ++++l  +lP++i   +r++ +fDplpP
  EPX72630.1 501 QGQ-------YSDITENLARHLILLNERTLQRFLPQRIL--QRTIVSFDPLPP 544
                 333.......34689*********************999..79*********9 PP

>> IHABP4_N  Intracellular hyaluronan-binding protein 4 N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.6      0.85   7.6e+03      96     122 ..      11      37 ..       3      40 .. 0.40
   2 ?   14.4  14.9   4.7e-06     0.042      23     123 ..      43     145 ..      41     163 .. 0.67

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 0.85
    IHABP4_N  96 gvdrnvkfsaskkekaq..kvlgekrapR 122
                 +++++v+f  s +e+ +  +v   +++pR
  EPX72630.1  11 RRQQEVTFESSDSESDSdnDV--SRPNPR 37 
                 334444444443333221222..444444 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 4.7e-06
    IHABP4_N  23 PfdiLreaekkkeekkkkkreekenkgkrkagpkgaksaakaaaakagkkesqkerkkpkkegeeqpekprtpgvdrnvkfsaskkekaqkv.lg.... 116
                 PfdiL +++ k   + +  ++e en+  +k++ ++ +  a+a+++k++kk++q+++kk+++ +++  e +++p+ d +v   ++  e ++++ l+    
  EPX72630.1  43 PFDILNAQTGKTDTNLESDASESENEV-EKEKDAKNHY-ANAEPQKKVKKKKQQKKKKSESTAKNITE-QENPKDDNTVDELKEIDEAVAELkLKygde 138
                 ****************99999999988.4444444444.44678999999999999988887655444.446667777766666666555444554455 PP

    IHABP4_N 117 ekrapRr 123
                  kr+  r
  EPX72630.1 139 TKRTTER 145
                 3443333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (662 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2825  (0.157566); expected 358.6 (0.02)
Passed bias filter:                      935  (0.0521501); expected 358.6 (0.02)
Passed Vit filter:                       150  (0.00836633); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.09u 0.39s 00:00:01.48 Elapsed: 00:00:00.60
# Mc/sec: 3328.93
//
Query:       EPX72631.1  [L=400]
Description: F-box protein Pof8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-06   27.9   0.1    9.3e-06   25.6   0.1    2.2  1  RRM_3     RNA binding motif
  ------ inclusion threshold ------
      0.012   15.6   0.1       0.03   14.3   0.1    1.7  1  MALT1_Ig  MALT1 Ig-like domain


Domain annotation for each model (and alignments):
>> RRM_3  RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.1     1e-09   9.3e-06      12      89 ..     301     397 ..     294     400 .] 0.78

  Alignments for each domain:
  == domain 1  score: 25.6 bits;  conditional E-value: 1e-09
                 S--HHHHHHHCHCCS.....-ECEEEE-TTSSEEEEEESSHHHHHHHHHHHHHC..............-B-CCTSSEEEEE--HHHHHHHHHHHHHH CS
       RRM_3  12 elsredikellsklg.....evayvdyekgdkegevrFkedeeakkalekatea..............klkikdaevtlelLeGeeEkeywkkiled 89 
                  + ++ ++ ++s+ +     e  y+dy k+++e+ vr+k++e+a   ++   +               k       +++el+eG eE+ yw++i  +
  EPX72631.1 301 STIQSLLHYVFSRQDptaicEPMYIDYRKDETEAIVRWKSSEQASLCVDCFSNQrrkqdahddirahrKHDKTGPFISAELIEGFEEESYWNQIQRK 397
                 44566677777777766666778********************8877765555555578899898876666777789****************9765 PP

>> MALT1_Ig  MALT1 Ig-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.1   3.4e-06      0.03      47     115 ..     246     315 ..     217     325 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 3.4e-06
    MALT1_Ig  47 satltdfp.edldvddklsnketseeadslllske.dlpdctlytrlssLqkLkeelvfkvkLhytysele 115
                 +a l++ + ++ + ++ ++ +++see +s + ++e + p+  l trl++L +L+++ +++  Lhy +s+ +
  EPX72631.1 246 QAVLSSPTnQEHHKHPLEALEDSSEESKSKIPKNEgEFPRGHL-TRLTNLHRLTNKSTIQSLLHYVFSRQD 315
                 455555442556677788889********99876625667777.*********************998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (400 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       901  (0.0502538); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.39s 00:00:01.07 Elapsed: 00:00:00.59
# Mc/sec: 2041.05
//
Query:       EPX72632.1  [L=731]
Description: mRNA cleavage and polyadenylation specificity factor complex subunit Ysh1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.4e-66  221.4   1.0    1.4e-65  220.9   1.0    1.2  1  CPSF73-100_C     Pre-mRNA 3'-end-processing endonuclease poly
    8.7e-32  109.7   0.0    2.2e-31  108.4   0.0    1.8  1  Beta-Casp        Beta-Casp domain
    2.2e-21   76.2   0.1    1.7e-20   73.3   0.0    2.1  2  Lactamase_B_6    Metallo-beta-lactamase superfamily domain
    2.8e-18   66.6   0.5    4.8e-18   65.9   0.5    1.4  1  Lactamase_B      Metallo-beta-lactamase superfamily
    1.4e-14   53.7   0.1    3.1e-14   52.6   0.1    1.6  1  RMMBL            Zn-dependent metallo-hydrolase RNA specifici
    1.4e-07   31.2   0.4    3.6e-07   29.9   0.4    1.7  1  Lactamase_B_2    Beta-lactamase superfamily domain
    3.2e-06   27.1   0.1    1.3e-05   25.2   0.1    1.9  1  Lactamase_B_3    Beta-lactamase superfamily domain
     0.0037   16.5   0.0     0.0085   15.3   0.0    1.5  1  Beta_lactamase3  Putative beta-lactamase-like family


Domain annotation for each model (and alignments):
>> CPSF73-100_C  Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  220.9   1.0     6e-69   1.4e-65       2     217 .]     486     689 ..     485     689 .. 0.96

  Alignments for each domain:
  == domain 1  score: 220.9 bits;  conditional E-value: 6e-69
  CPSF73-100_C   2 lvsGvLVqkdfklsllapeDLreytgLstttitqkqrlplsasiellkwaleqlfgdveeleekekkktllvmgcvtvrveskgeveleWesnllnD 98 
                   ++sG+LVqkd  ++l++ +DLr++++L+tt++tqkq +p+ +s+el k++l+q+fg+v+e ++k+++  ++vm+++++++ +++++ leW +n++nD
    EPX72632.1 486 IMSGILVQKDSVYKLMSADDLRDFSDLTTTVLTQKQVIPFFSSLELAKYHLNQMFGHVKEERTKSGTLRYTVMDAIHLSMPTEHKLNLEWAGNIMND 582
                   79*********************************************************************************************** PP

  CPSF73-100_C  99 miADsviavllsvesspasvkrsskkhshshkekleeknshaklskeerlerllllLeaqFGedkvielpkepvpgvevkvdkkeakidletleVec 195
                   +iADsvi+vll +esspasvk +++k+ h h       ++ +k+++e+r+++l+++Le+qFGe+ ++     +++gv +k+d+ ea+id++t++Vec
    EPX72632.1 583 TIADSVITVLLGIESSPASVKLTNHKCVHGH-------THPRKSKAEDRISKLMMFLESQFGESITK-----SKDGVYIKIDQYEASIDFSTMKVEC 667
                   *********************9999999999.......56788999*****************9933.....4789********************* PP

  CPSF73-100_C 196 esevlkdrveavveravetvap 217
                   ++e l++r+ +v++rav+t+ p
    EPX72632.1 668 NNEILRTRIVHVLSRAVNTILP 689
                   ******************9876 PP

>> Beta-Casp  Beta-Casp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.4   0.0   9.9e-35   2.2e-31       1     110 []     253     374 ..     253     374 .. 0.91

  Alignments for each domain:
  == domain 1  score: 108.4 bits;  conditional E-value: 9.9e-35
                 HHHHHHHH..HCTT...TTS-S.-EEEEE-HHHHHHHHHGGGGGGE-SHH....HHH.H.....HH.................HS-SSEEEEES-TTSS CS
   Beta-Casp   1 aqellylLeelwkekk.ledlk.lpiyldsplaskatevYkeyaeveakslewmesk.ke...eln.................sskgpkvilassgmle 76 
                 aqell++L+e+w+++  l   + +piy++s+la+k+++v+++y       +++m+++ ++   e +                 ++ gp+vi+as+gml+
  EPX72632.1 253 AQELLLILDEYWNNHYdL---RpVPIYYASSLARKCMAVFQTY-------VNMMNDNiRKafaE-RnpfifryiknlrnldrfDDIGPSVIIASPGMLQ 340
                 7*************9844...338*******************.......99999998544434.1699*************97789************ PP

                 SSHHHHHHHHHTTSTTSEEEESS---TTSHHHHH CS
   Beta-Casp  77 gGrsrellkklledprntvilvgyqaegTlgrkl 110
                 +G+sr ll+++++dprnt++l+gy++egT+++++
  EPX72632.1 341 NGVSRALLERWAPDPRNTLLLTGYSVEGTMAKQI 374
                 *******************************997 PP

>> Lactamase_B_6  Metallo-beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.3   0.0   7.7e-24   1.7e-20       1     175 [.      36     200 ..      36     212 .. 0.89
   2 ?    0.2   0.0      0.19   4.3e+02      32      72 ..     412     454 ..     393     461 .. 0.70

  Alignments for each domain:
  == domain 1  score: 73.3 bits;  conditional E-value: 7.7e-24
  Lactamase_B_6   1 lLeldnvkiLlDvGwdeskvslesalkelekv.iptvdliLLshatlehlGayallyakfksklllnipvyatlpvvkLGrvslldlyaskgllgp 95 
                    +L++ + +++lD G++   ++   al ++++  ++tvd+ L+sh  l+h+++++++++k       + +v+ t+p+++  + +l d+++ +++   
     EPX72632.1  36 ILQYKGKTVMLDAGVHPA-YNGLAALPFYDEFdLSTVDVLLVSHFHLDHVASLPYVMTKT----NFRGRVFMTHPTKAVCKWLLSDYVKVSNVG-- 124
                    6888999*********97.555678888888669*******************9999875....3589******************99988775.. PP

  Lactamase_B_6  96 edseeleledideafdkiktlkYsQklelkskldgltitaynaGhtlGGtiWkiskesekivYavdwnhakeshLngaal 175
                    ++++  + +d  +af++++++ Y+ ++e++    g+ +t+y aGh+lG++++ i+    ki+Y  d++ + ++hL+ a++
     EPX72632.1 125 VEDQLYDEKDLTAAFERMEAVDYHSTIEVE----GVKFTPYHAGHVLGACMFFIEMAGVKILYTGDYSREEDRHLHIAEV 200
                    55567899****************998776....8****************************************98765 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.19
  Lactamase_B_6  32 vip..tvdliLLshatlehlGayallyakfksklllnipvyat 72 
                     i+  + d+i+L h +++ +G +   + +  ++  l+ +vy++
     EPX72632.1 412 FIDqvKADHIILVHGEQTNMGRLKSALLSKFHNQKLDSKVYTP 454
                    354115699************9987766666788899999986 PP

>> Lactamase_B  Metallo-beta-lactamase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.9   0.5   2.1e-21   4.8e-18       4     162 ..      30     198 ..      27     231 .. 0.91

  Alignments for each domain:
  == domain 1  score: 65.9 bits;  conditional E-value: 2.1e-21
                  CSSEEEEEEETTCEEEES--SCHHHHHHHHHHHHHTSGGGGEEEEE-SBSSHHHHTTGGGCTTHHCCEETCCEHHHHCCHCHHHHHHHHHCCHH.... CS
  Lactamase_B   4 dpvnsyliegdggviLiDtGtsteaaraalelaalglkpkdvdavilTHlHlDHiGglgglveatdvpvgavaeeapalfmeeaddaasrkgll.... 97 
                  ++ ++ +++ +g++++ D+G++++++ +a ++++ ++++  vd ++++H+HlDH++ l++++ +t++  ++   +  +    ++  ++++ ++     
   EPX72632.1  30 VGRSCHILQYKGKTVMLDAGVHPAYNGLAALPFYDEFDLSTVDVLLVSHFHLDHVASLPYVMTKTNFRGRVFMTHPTKAVCKWLLSDYVKVSNVgved 127
                  6789**********************************************************************9999999999999999999999** PP

                  ......TTCHCGCCEEEEETTTEECCCTEEEEEHECTTSTSCCEEEEEETTCCEEEECTTTSSHHCCCCCC CS
  Lactamase_B  98 ......lagvsadkpdvdeeeldgnaggrralyvtggpghghghgvveygggkvlftGDallagetgridl 162
                        + ++ +  +++++   ++++ g+++++ + g++ g++ + +e+ g k+l+tGD + ++++ +   
   EPX72632.1 128 qlydekDLTAAFERMEAVDYHSTIEVEGVKFTPYHAGHVLGACMFFIEMAGVKILYTGDYSREEDRHLHIA 198
                  ******9******************************************************9888766555 PP

>> RMMBL  Zn-dependent metallo-hydrolase RNA specificity domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.6   0.1   1.4e-17   3.1e-14       2      62 .]     389     454 ..     388     454 .. 0.85

  Alignments for each domain:
  == domain 1  score: 52.6 bits;  conditional E-value: 1.4e-17
       RMMBL   2 ipvkarieeidfSgHadknellelirklkprnvilvHGeeeatsalarllkeeeg.....idvfiP 62 
                 ip+++ +ee++f +H d+ +  e+i ++k  ++ilvHGe+  + +l+++l ++++      +v++P
  EPX72632.1 389 IPRRMAVEELSFAAHVDYIQNSEFIDQVKADHIILVHGEQTNMGRLKSALLSKFHnqkldSKVYTP 454
                 89************************************************6444322222666665 PP

>> Lactamase_B_2  Beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.9   0.4   1.6e-10   3.6e-07       4     183 ..      45     239 ..      42     249 .. 0.68

  Alignments for each domain:
  == domain 1  score: 29.9 bits;  conditional E-value: 1.6e-10
                    EES--TTHHHHHTCGGS--SSS--..SEEEEE-SS--HHHHGGGGCCCC...C--EEEEEEEEHHHHH..........HCCTTCGHHHCHTT.... CS
  Lactamase_B_2   4 LiDagpdlrqqalralqPvelrdelppidaVllthaHyDHlaglltlre...lrpkklplyapkgvla..........vleanfvylaleee.... 82 
                     +Dag   + + l al P     +l+ +d++l++h H DH+a l+ + +   +r    +++ +  + a          ++++ +v      e    
     EPX72632.1  45 MLDAGVHPAYNGLAAL-PFYDEFDLSTVDVLLVSHFHLDHVASLPYVMTktnFR---GRVFMTHPTKAvckwllsdyvKVSNVGV------Edqly 130
                    5666666333333343.4445667899********************9954443...4566565555534454444442222222......25555 PP

                    .......TTEEEEEE-TTSEEEECSTTEEEEEEEE-EE--CTCCE-TTTSEEEEEECTTEEEEEESS-S---HH..HHHHHCT..-SEEEEE-S-S CS
  Lactamase_B_2  83 .......pavnvheldwgesfelgdggleitatparhksgrrldrnagdtlGlriegggkrvyyigDtgyipee..igerlgg..adllllditay 167
                           ++++++ +d + ++e++  g+++t+  a h  g         ++ + ie +g +++y+gD  + +++    +++ +  +d+l+ + t+ 
     EPX72632.1 131 dekdltaAFERMEAVDYHSTIEVE--GVKFTPYHAGHVLG---------ACMFFIEMAGVKILYTGDYSREEDRhlHIAEVPPtkPDILITESTYG 215
                    668888899**************8..75566665555555.........599****************9888542233566666688888888877 PP

                    STTHHHH........HHT---STS CS
  Lactamase_B_2 168 eddemir........hmgHltpee 183
                    +     r          +H+t+++
     EPX72632.1 216 TASHQPRlekearllNIVHSTIRN 239
                    776666677777777777777765 PP

>> Lactamase_B_3  Beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.1   5.6e-09   1.3e-05       6     123 ..      31     196 ..      29     212 .. 0.72

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 5.6e-09
  Lactamase_B_3   6 ghnsflletagarilvDPf.......kanlgyeppa..........eeaDlvlisqaledHahletlkql.......................... 58 
                    g ++  l+ +g+++++D +                a           ++D++l+s+ + dH +  +                              
     EPX72632.1  31 GRSCHILQYKGKTVMLDAGvhpayngL--------AalpfydefdlSTVDVLLVSHFHLDHVASLPYVMTktnfrgrvfmthptkavckwllsdyv 118
                    889**************8854333321........233367777889**************98766555578999999999999999999998888 PP

  Lactamase_B_3  59 ....................aenvkvleegeslevggleiravatshdavggsergenngflleqdgltiyhlGhlahelsseel 123
                                        +e+++ ++  +++ev+g++++  ++       ++ g  ++f +e++g++i++ G+ + e +   +
     EPX72632.1 119 kvsnvgvedqlydekdltaaFERMEAVDYHSTIEVEGVKFTPYHAG------HVLG-ACMFFIEMAGVKILYTGDYSREEDRHLH 196
                    8888888777777766666666666666666666666666555554......4666.7*****************9986443333 PP

>> Beta_lactamase3  Putative beta-lactamase-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   3.8e-06    0.0085     120     185 ..     131     195 ..     105     221 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 3.8e-06
  Beta_lactamase3 120 eeidierlkrnvkfiryneliyfddltieakaagtflGWvnyllevekkkilayisslslkkklsl 185
                      +e d++ +  ++  + y+  i+++ ++ ++  ag  lG +++ +e+   k + y+  +s ++   l
       EPX72632.1 131 DEKDLTAAFERMEAVDYHSTIEVEGVKFTPYHAGHVLGACMFFIEMAGVK-ILYTGDYSREEDRHL 195
                      678899999999**************************************.899999998765444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (731 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       449  (0.0250432); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.75u 0.33s 00:00:01.08 Elapsed: 00:00:00.52
# Mc/sec: 4244.35
//
Query:       EPX72633.1  [L=321]
Description: MTC tricarboxylate transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.8e-121  403.9   0.0   4.2e-121  403.8   0.0    1.0  1  Mtc       Tricarboxylate carrier


Domain annotation for each model (and alignments):
>> Mtc  Tricarboxylate carrier
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  403.8   0.0  2.4e-125  4.2e-121       1     312 []      11     321 .]      11     321 .] 0.97

  Alignments for each domain:
  == domain 1  score: 403.8 bits;  conditional E-value: 2.4e-125
         Mtc   1 yDqstflGRlkhffsvtdprtlllseaeleeakelvekykkgklppelteeelwkakklvdSavHPdtgekillpfRmsafvpvnllitggmltpyktt 99 
                 yD+st++GR++h +++tdprtll +++++++a ++++++++g++   l+ +++w akk+vdS++HPdt+e+++lpfRms++ ++nl++t+gml+p+ +t
  EPX72633.1  11 YDLSTYWGRVRHAMDITDPRTLLSTKKDIDDAVKTLREFEEGNC--ALS-DKVWSAKKVVDSTLHPDTKEPVFLPFRMSCYALTNLVVTAGMLQPNLGT 106
                 9*****************************************95..665.9************************************************ PP

         Mtc 100 pavifwqwanqsfnaavnytNrnasspistsqlltsyvaAttaavgtalglnsllkrlkk.skatksllgrlvPfaavaaancvNiplmRqkelqkGIe 197
                 ++++fwqw+nqs+n+a+n++N+n+s++++  q+++sy+ A+ta++g+a+gln++++r+k   ++ k++lgrl Pfaava a+++N++lmR +el++GI+
  EPX72633.1 107 AGTVFWQWTNQSVNVAFNSANANKSTQLTLPQMAKSYMYAVTASCGVAIGLNKVVPRIKFlPPTSKAVLGRLTPFAAVAFAGVLNVFLMRGEELRQGID 205
                 **********************************************************98988889********************************* PP

         Mtc 198 VtdeegnelgkSkkaAkkAisqvalsRvlmaapamvlpplimnalekkkflkkrprlaalpiqlllvglvllfalPlalalFpqrssisvskLepelqe 296
                 V+d+egn+lgkS++aA  A++++alsR+++a+p+mv+ppli+ +l+k+++l+k p+l+  p++l+lvg+++l+alPla+++Fp r++is  kLe+++++
  EPX72633.1 206 VFDNEGNSLGKSNRAALYAVGETALSRIINASPIMVIPPLILMRLQKTNWLRKSPKLTI-PVNLGLVGITSLIALPLAVGIFPGRETISPMKLESKFHD 303
                 **********************************************************5.*************************************** PP

         Mtc 297 kikk.kk.iekvyfNKGL 312
                   +k ++ +ekv+fN+GL
  EPX72633.1 304 LKDKnGNaLEKVEFNRGL 321
                 *6554336*********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       534  (0.0297841); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2278.81
//
Query:       EPX72634.1  [L=434]
Description: ATP-dependent RNA helicase Uap56 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-36  126.1   0.1    2.1e-36  125.3   0.1    1.4  1  DEAD        DEAD/DEAH box helicase
    2.4e-28   98.7   0.2    6.3e-27   94.1   0.0    2.6  3  Helicase_C  Helicase conserved C-terminal domain
    8.4e-09   35.7   0.0    1.9e-08   34.5   0.0    1.6  1  ResIII      Type III restriction enzyme, res subunit
  ------ inclusion threshold ------
      0.023   14.0   0.0      0.044   13.1   0.0    1.5  1  CMS1        U3-containing 90S pre-ribosomal complex subunit


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.3   0.1   4.7e-40   2.1e-36       2     173 ..      76     243 ..      75     246 .. 0.94

  Alignments for each domain:
  == domain 1  score: 125.3 bits;  conditional E-value: 4.7e-40
                 HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTT.STSEEEEEETTSSHHHHHHHHHTT.. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxx.. RF
        DEAD   2 diQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkky.idlrvlliiggvaardqlskldng.. 97 
                 ++Q+ +ip+ + g dvl++a+ G+GKT++f++  lq++ e   + +  +l+++ treLa q+ n++ +f ky  d+r+++++gg + ++++++++ +  
  EPX72634.1  76 EVQQVCIPQSILGTDVLCQAKSGMGKTAVFVLSTLQQI-E-PVDGEVSVLVLCHTRELAFQIKNEYARFSKYlPDVRTSVFYGGINIKQDMEAFKDKtk 172
                 68*******999**************************.4.7999***************************778*******************63346 PP

                 .CSEEEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHT.TTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHH CS
                 .xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  98 .vdivvgtpgrlddllstgklnlsqvrflVlDEadrlldq.gfsdfinrilnqlpqitcdgklqrqvivlSATlpkdv 173
                  ++ivv+tpgrl  l++++ +++++v+ +VlDE+d+lld+ +++++i+++++++       + q+qv+++SATl+++v
  EPX72634.1 173 aPHIVVATPGRLNALVREKIMRVNNVKHFVLDECDKLLDSvDMRRDIQEVFRAT-------PPQKQVMMFSATLSSEV 243
                 7***************99999*******************9*************.......67889********9877 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.068     3e+02      18      73 ..     121     180 ..     105     200 .. 0.72
   2 ?   -2.9   0.0         2   8.8e+03      13      30 ..     226     244 ..     215     264 .. 0.66
   3 !   94.1   0.0   1.4e-30   6.3e-27       2     111 .]     282     390 ..     281     390 .. 0.90

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.068
                 EEEEEESSHH...HHHH..HHHHHHHT...TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEES CS
  Helicase_C  18 kilifvntid...rlek..vklllekk...gikvavlhgelpqnereeileqfnkgesdvLiat 73 
                  +l+ ++t++   ++++  +++    k   ++++ v++g ++ ++  e++++   +  ++++at
  EPX72634.1 121 SVLVLCHTRElafQIKNeyARFS---KylpDVRTSVFYGGINIKQDMEAFKDK-TKAPHIVVAT 180
                 67899999997554432432222...245589999999999999888888776.3344477776 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2
                 TTTTSEEEEEESSHH.HHH CS
  Helicase_C  13 eeeggkilifvntid.rle 30 
                 +  ++++++f+ t + ++ 
  EPX72634.1 226 TPPQKQVMMFSATLSsEVR 244
                 5567888888888775443 PP

  == domain 3  score: 94.1 bits;  conditional E-value: 1.4e-30
                 HHHHHHHHHHHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHHH CS
  Helicase_C   2 kleallellkleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvtsy 100
                 k +++ +ll  + e ++++ifv++++r+++++ ll++ ++ ++++hg lpq+er+   ++f++ + ++ +atdv +rGidi++vn Vin+d+p+++++y
  EPX72634.1 282 KNRKINDLL-DSLEFNQVVIFVKSVSRANELDRLLRECNFPSICIHGGLPQEERINRYKAFKDFDKRLCVATDVFGRGIDIERVNIVINYDMPDSPDTY 379
                 566677777.77799***********9988555544457***********************9999********************************* PP

                 HHHHTTSSSTT CS
  Helicase_C 101 iqriGRtgRag 111
                  +r+GR+gR+g
  EPX72634.1 380 LHRVGRAGRFG 390
                 *********86 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.5   0.0   4.2e-12   1.9e-08      27     169 ..      91     239 ..      76     241 .. 0.79

  Alignments for each domain:
  == domain 1  score: 34.5 bits;  conditional E-value: 4.2e-12
                 EEEEESTTSTHHHHH.HHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG..........GEEEESSS-B--.......-SEEEEEHHHHHHTH CS
      ResIII  27 glikmaTGtGKTlva.aklierllkkgkeekflflvprkslleqtleefkkflseayke......igkkvsgdkkkakekdstnkkilvttiqsldads 118
                 +l ++  G+GKT v  +++ +++    +e  +l+l+++++l  q ++e+++f++   +        g ++++d + + + +++  +i+v+t  +l+a  
  EPX72634.1  91 VLCQAKSGMGKTAVFvLSTLQQIEPVDGEVSVLVLCHTRELAFQIKNEYARFSKYLPDVrtsvfyGGINIKQDMEAF-KDKTKAPHIVVATPGRLNALV 188
                 5678889********899999999999999****************8887666543333433665555566666655.8899999************** PP

                 ........HHHTTT-SEEEEETGGGTTS.TTTHH.HHHT---....SEEEEEESS- CS
      ResIII 119 eeeeeeseellrdrfdviiiDEaHrlgakkswre.ilekfke....avllglTATp 169
                       ++ ++ ++ + ++ DE+ +l ++  +r+ i e f++    + ++ ++AT+
  EPX72634.1 189 -----REKIMRVNNVKHFVLDECDKLLDSVDMRRdIQEVFRAtppqKQVMMFSATL 239
                 .....778888899999***********855555576666444445777889**97 PP

>> CMS1  U3-containing 90S pre-ribosomal complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   9.7e-06     0.044     179     210 ..     175     206 ..     118     233 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 9.7e-06
        CMS1 179 giavGtpgRildLleeeslsvdeLkrivlDas 210
                  i v tpgR+  L++e+ ++v+++k+ vlD  
  EPX72634.1 175 HIVVATPGRLNALVREKIMRVNNVKHFVLDEC 206
                 58899*************************74 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (434 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       614  (0.0342462); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 3004.13
//
Query:       EPX72635.1  [L=429]
Description: hypothetical protein SOCG_00398 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
       0.71    8.8   3.2          1    8.2   3.2    1.2  1  Pox_G5       Poxvirus G5 protein
       0.74   10.3   9.9       0.59   10.6   7.2    2.2  2  GlutR_dimer  Glutamyl-tRNAGlu reductase, dimerisation domain


Domain annotation for each model (and alignments):
>> Pox_G5  Poxvirus G5 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   3.2   0.00012         1      91     157 ..      24      90 ..      16      95 .. 0.89

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00012
      Pox_G5  91 kntikRKreelekleaaiseLdvedllyeeikedlelrikklsfylfLaesnnlkaileeaLaslad 157
                 + ++k   +++e +++++ +L  ++ + ++ ++++  +i++ +f  +L e+++  ++ e  L++l++
  EPX72635.1  24 QLALKELDQQIEVIQQQERQLAFRKRAIDDARQEVLQQIQHRKFRQYLHEREQEARLQEYYLEQLRE 90 
                 5556666789999*****************************************9999999999865 PP

>> GlutR_dimer  Glutamyl-tRNAGlu reductase, dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   7.2   6.6e-05      0.59      17      78 ..      18      79 ..      13     103 .. 0.85
   2 ?   -0.8   0.3      0.24   2.2e+03      23      32 ..      95     104 ..      77     138 .. 0.53

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 6.6e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-S..--------TTHHHHHHHHHHHHHHHHHH CS
  GlutR_dimer 17 lkslevvptIkalrekaeeireeeleralkklaldgedreelekltrslvnkllheptarLk 78
                 ++ ++++ ++k+l +++e i+++e + a++k a+d+  +e+l+++ ++ ++++lhe  ++ +
   EPX72635.1 18 VQDHSLQLALKELDQQIEVIQQQERQLAFRKRAIDDARQEVLQQIQHRKFRQYLHEREQEAR 79
                 5667778889***********************99999999**************9766655 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.24
                  HHHHHHHHHH CS
  GlutR_dimer  23 vptIkalrek 32 
                  +++I+ + ++
   EPX72635.1  95 EQVIRTIVQR 104
                  3333333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (429 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1886  (0.105193); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 2908.72
//
Query:       EPX72636.1  [L=767]
Description: Cullin 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   6.9e-166  553.4  17.3   9.8e-166  552.9  17.3    1.2  1  Cullin        Cullin family
      5e-25   87.3   4.9    7.9e-25   86.7   3.2    2.4  3  Cullin_Nedd8  Cullin protein neddylation domain
  ------ inclusion threshold ------
      0.041   14.0   0.0       0.19   11.8   0.0    2.1  1  PHB_acc_N     PHB/PHA accumulation regulator DNA-binding doma
      0.053   13.6   0.2      0.053   13.6   0.2    2.4  3  DUF2096       Uncharacterized protein conserved in archaea (D


Domain annotation for each model (and alignments):
>> Cullin  Cullin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  552.9  17.3  2.2e-169  9.8e-166       1     618 []      24     668 ..      24     668 .. 0.93

  Alignments for each domain:
  == domain 1  score: 552.9 bits;  conditional E-value: 2.2e-169
      Cullin   1 Wekleeaiqeilk...knvsklsfeelYravynlvlsk.............ekkqgekLydklkelieehlkellkellkeesdeelLkalkkeWedhk 83 
                 W++l++++ +il+   + +s + ++elY+a++n++                ++  ge Ly++l  +++e+l++l+++ l+e+++e+ L+a+ ++W+++k
  EPX72636.1  24 WDFLKDGVLHILDrldEGMSITRYMELYTAIHNYCADAsktmsvesfsdqtANVLGEALYNNLVLYLKEYLTQLRTSSLSESTHEDRLAAYANCWTQFK 122
                 9***********55658*******************77*************8899******************************************** PP

      Cullin  84 tsmkmirdifmyldrvyvk.klp.......svydlglelfrdhvfriklkdrlieallkliekeRegevidrsllksviemlvelgedse.....dkkv 169
                 ts+++++++f yl+r+ vk k         ++y+l+l+++ +hvf  ++ d + ++ll +++k+R+ e +d + +k +++++ +l+ d+      + + 
  EPX72636.1 123 TSSRFLHHLFGYLNRYWVKlKNRfsdtvvyDIYTLCLVSWYHHVFM-HICDDMLASLLYVLNKKRSHEPVDMKDVKVCVDSITSLSFDKAdmskaNLSS 220
                 ***************665542223444444***************5.899***********************************9988877654444* PP

      Cullin 170 YeeeFekafleateefYraeaeellaensvaseYlkkaeerleeEeervekyldsstkkkllevleeelikkhleelleeelkklledekledLkrlyk 268
                 Y++ Fe++f+++++efY  e++++++ + ++++Yl kae+rl eEee v+ yl++st k+lle++e+eli+kh+e l++  ++++l+++ ++d+ r+y+
  EPX72636.1 221 YKTFFEQRFISSSREFYGTESSQYITMH-SITDYLGKAENRLLEEEELVHLYLHESTLKPLLEAVEDELITKHAEVLHND-FSRMLDENCHNDIVRMYR 317
                 **************************87.788***********************************************9.*****999********** PP

      Cullin 269 llsrvd.gleeLrkaleeyikeeg.kaivkdake..kektedakkyveklLelkdkfdklvkeafnndkefekaldeafeefvnknkv....nsksael 359
                 l+sr++ gl++Lrk++ee++k+ g  a+ +   e  k ++ d+k+y e lL+ + + ++lv++af++d +f+k+ld +++e+vn+n v    +s+s+el
  EPX72636.1 318 LMSRTPnGLQPLRKSFEEFVKRSGfLAVARIVPEgnKVSEVDPKDYLEMLLSTYLSSKNLVDTAFHGDADFTKSLDTSCREIVNRNIVchpsSSRSPEL 416
                 *****66*****************95544444334478999*******************************************8877****9****** PP

      Cullin 360 lakYiDelLkkglkglseeeleekldkvlvlfryiedKDvFekyYkkhLakRLllgksasddaEksmiskLkeecGseftskLegMfkDiklskdlnke 458
                 lakY D+ L+k++k+++ +++e+ l+ ++++fry+edKDvF+++Y+k LakRL++g s+s+daE  m+skLke cG+e+tskL++Mf+Di+ls++l+++
  EPX72636.1 417 LAKYSDSVLRKNSKTVEVDDIENILTSIIIIFRYVEDKDVFQNFYTKLLAKRLVNGMSNSQDAEAGMLSKLKEVCGFEYTSKLQRMFQDISLSQELTES 515
                 *************************************************************************************************** PP

      Cullin 459 fkeyleeekkkkkkvdlsvkVLtagaWpterskesevsvklpeeledlieeFeefYkskhsgrkLtWlhslgsaelkatfpkk...kyelqvstfqmvv 554
                 f++  e    +k+ +d+ ++VL +++Wp ++   s++++++p+el++l+e+Fe +Y++ h+grkL+Wl++l+++e+ka+++ +   +y +qvstfqm+v
  EPX72636.1 516 FHQLPE---MQKSPIDFYAMVLGTSFWPLTA---SSSNFHIPSELKSLYERFEGYYNTCHNGRKLSWLFHLSKGEIKARINPNsstTYVFQVSTFQMAV 608
                 ***986...44467**************644...4589******************************************99667799*********** PP

      Cullin 555 LllFndeeeklsyeeiqeatglpekeLkrtLqsLavakkarvLlkepkskdveptdefsvNaeF 618
                 Lll+n ++++++y+e+ e tgl+++ L+  L  +    +a+vLl e+ ++  e ++++++N +F
  EPX72636.1 609 LLLYN-QRTSYKYDELLELTGLNQDILTGILNIFL---RAKVLLLEEGKNLGELDSVYTLNMNF 668
                 *****.669*************************9...57799888733455558899999998 PP

>> Cullin_Nedd8  Cullin protein neddylation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0         1   4.5e+03      30      51 ..     182     203 ..     180     205 .. 0.77
   2 ?   -3.8   0.0       3.2   1.4e+04      36      48 ..     577     589 ..     573     590 .. 0.81
   3 !   86.7   3.2   1.8e-28   7.9e-25       1      61 [.     699     759 ..     699     761 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 1
  Cullin_Nedd8  30 ieqlskrftpsiadikkrIesL 51 
                   +++ +++ +++ +d+k +++s 
    EPX72636.1 182 LNKKRSHEPVDMKDVKVCVDSI 203
                   5566677788999*****9985 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 3.2
  Cullin_Nedd8  36 rftpsiadikkrI 48 
                    f +s+ +ik rI
    EPX72636.1 577 LFHLSKGEIKARI 589
                   58999999**999 PP

  == domain 3  score: 86.7 bits;  conditional E-value: 1.8e-28
  Cullin_Nedd8   1 dRklaiqaaIVRiMKsrktlshneLvsevieqlskrftpsiadikkrIesLiekeYleRde 61 
                   dRkl++q+aIVRiMK+r+tl+h  Lv+e+i+q+++rf p+++dik++I+ LiekeYleR+ 
    EPX72636.1 699 DRKLLLQSAIVRIMKARRTLKHVVLVKETIDQIKSRFAPQVSDIKRCIDMLIEKEYLERQG 759
                   8**********************************************************85 PP

>> PHB_acc_N  PHB/PHA accumulation regulator DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   4.2e-05      0.19       7      31 ..     233     257 ..     232     262 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 4.2e-05
   PHB_acc_N   7 NRrLYdtetssYitlediaelvreg 31 
                  R  Y te+s+Yit++ i ++  + 
  EPX72636.1 233 SREFYGTESSQYITMHSITDYLGKA 257
                 5899**************9987665 PP

>> DUF2096  Uncharacterized protein conserved in archaea (DUF2096)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.1       1.2   5.3e+03      38      95 ..     235     289 ..     214     311 .. 0.70
   2 ?   -2.0   0.1      0.74   3.3e+03      74      87 ..     452     467 ..     423     518 .. 0.54
   3 ?   13.6   0.2   1.2e-05     0.053      87     145 ..     644     699 ..     592     721 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.2
     DUF2096  38 nfYkldphapdlikelkkaekelneiqeaLldlaekvdeeyakkwldklkkasrgekv 95 
                 +fY ++ ++     +++ + ++l ++++ Ll+  e v   +++  l+ l +a + e  
  EPX72636.1 235 EFYGTESSQ---YITMHSITDYLGKAENRLLEEEELVHLYLHESTLKPLLEAVEDELI 289
                 555544443...3678888888888888888766666666666666666666666655 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.74
     DUF2096  74 vdeeyakkwldkl..k 87 
                 +d+++ +++  kl  k
  EPX72636.1 452 EDKDVFQNFYTKLlaK 467
                 3555555555554322 PP

  == domain 3  score: 13.6 bits;  conditional E-value: 1.2e-05
     DUF2096  87 kkasrgekvleepkkkskFivevprgfetirvklkkpleeerlqeiaEyegvIiefeed 145
                  k+   e+  +  + +s +  ++  +++ irv+l+ p+++e  qe+ E++  I e   d
  EPX72636.1 644 AKVLLLEEGKNLGELDSVYTLNMNFKMKKIRVQLNLPIKSEQKQEVVETQKTIEE---D 699
                 4566778888888999*********************************998844...4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (767 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       870  (0.0485247); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.71u 0.26s 00:00:00.97 Elapsed: 00:00:00.45
# Mc/sec: 5121.97
//
Query:       EPX72637.1  [L=629]
Description: glucosidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   8.1e-213  707.4   1.7   9.4e-213  707.1   1.7    1.0  1  SKN1      Beta-glucan synthesis-associated protein (SKN1)


Domain annotation for each model (and alignments):
>> SKN1  Beta-glucan synthesis-associated protein (SKN1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  707.1   1.7  5.2e-217  9.4e-213       2     501 .]     127     629 .]     126     629 .] 0.96

  Alignments for each domain:
  == domain 1  score: 707.1 bits;  conditional E-value: 5.2e-217
        SKN1   2 sllseekekDDylhnpdpeakadkkkkvkdlklldkrgllnvlgllllvlgllllfivlPvltylgkkekestkseaaeiltkaqvpllsair.tslid 99 
                  l++e+ke DD+lh p p      k+ ++ + ++  +g++++l+l++l+ g+ +lfi+lP+lty+g++  +st   + + +t++++++ls +r +slid
  EPX72637.1 127 ALSKEDKEIDDFLHYPLP-----AKDAKRLSYFVGGEGFMQLLFLAFLISGTGMLFIGLPILTYTGHNALAST---SDNGITNHKFRSLSILRsKSLID 217
                 67899***********77.....33344567899*******************************88888876...77889999*******99889*** PP

        SKN1 100 pdtPesaltrkskdgkklkLvfsDefnkegrtfydGdDqfwtavdlhYaatkdlewYdpdavttadGtLelrldafknhdLnyrsGmlqsWnklCftgg 198
                 ++tP++a++++  +  +l+LvfsDefnk+grtfydGdDqfw+a+dlhYaat+d+e+Yd+d+ tta+GtL+lr+daf nh+Ln+rsGm++sWnklCf+gg
  EPX72637.1 218 SETPQEAYKKTVPHLGTLDLVFSDEFNKPGRTFYDGDDQFWEATDLHYAATSDYEYYDADTPTTANGTLRLRMDAFFNHNLNFRSGMITSWNKLCFKGG 316
                 *************************************************************************************************** PP

        SKN1 199 alevsvsLpgkgevsGlWPglWtmGnLgRpGylasteGvWPYsYdsCDvGitpnqssadGlsylpGqrlsaCtCkgedhpspgvgRgaPeiDileaeve 297
                 ++evs+sL gk+ + GlWPg+Wt+GnL RpGyla+++GvWPY+YdsCD+Gitpnqs+++G+s+l Gqrl++CtC+ge hpspg+gRgaPeiD le+++ 
  EPX72637.1 317 RIEVSASLGGKPGIPGLWPGIWTIGNLVRPGYLATSDGVWPYAYDSCDAGITPNQSDPSGISFLGGQRLPKCTCDGEPHPSPGKGRGAPEIDCLEGTFG 415
                 *************************************************************************************************99 PP

        SKN1 298 teke.........vgvasqslqvaPfdiwylpdydfveiydksvtalnsyaGgpfqqalsglttlnkewyeeegkkfqkygleykpnddekgyitWfvg 387
                 +            ++vasqslq+aP+d++y+p+yd+v +y++s++a+n ++Gg +qqals  t+ln++w+  +++++q+yg++y+p+   +++i+Wfvg
  EPX72637.1 416 SGIPyngsinmesMPVASQSLQTAPYDMFYFPNYDYVVVYNQSISAVNGWTGGVYQQALSVATQLNNTWL--SNRAYQTYGFDYQPGYGPDSFISWFVG 512
                 98878889999999********************************************************..6789*********************** PP

        SKN1 388 dektwtlkakalgpngnigqRliseepmsiilnlgisnnfaaidwkelefpatlriDyvRlyqeedees...vgCDPedyptadYiekhkeaYenanlt 483
                 d++twt+++ a+g+ngn+g R +seep+ iiln+gis ++ +++w el+fp t +iDyvR+yq+++++s   +gCDP+++pt++Yi++h++aY+n n+t
  EPX72637.1 513 DNYTWTMYQPAIGANGNVGPRGVSEEPLIIILNMGISPTWVYFYWYELSFPETQYIDYVRIYQDTSKNSnheLGCDPKGFPTTEYIAQHPKAYKNYNAT 611
                 ***************************************************************987765567*************************** PP

        SKN1 484 sweeagyefpknklldec 501
                 swe+agy+ pknkl+d+c
  EPX72637.1 612 SWEMAGYSRPKNKLMDGC 629
                 ****************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (629 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       350  (0.0195214); expected 358.6 (0.02)
Passed bias filter:                      277  (0.0154498); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 4417.59
//
Query:       EPX72638.1  [L=512]
Description: SWI/SNF and RSC complex subunit Ssr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.3e-29  101.0   0.2    8.1e-29   99.8   0.2    1.7  1  SWIRM            SWIRM domain
    5.8e-10   39.2   0.0    1.2e-09   38.2   0.0    1.5  1  Myb_DNA-binding  Myb-like DNA-binding domain
    1.2e-06   28.3   4.1    2.2e-06   27.5   4.1    1.4  1  SWIRM-assoc_1    SWIRM-associated region 1
    0.00041   20.6   0.0    0.00097   19.3   0.0    1.6  1  Myb_DNA-bind_6   Myb-like DNA-binding domain
  ------ inclusion threshold ------
      0.028   14.3   0.5       0.13   12.1   0.0    2.3  2  Myb_DNA-bind_7   Myb DNA-binding like
        5.6    8.1   6.6        3.8    8.6   0.4    3.7  5  Pheromone        Fungal mating-type pheromone


Domain annotation for each model (and alignments):
>> SWIRM  SWIRM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.8   0.2   2.7e-32   8.1e-29       1      89 []      47     132 ..      47     132 .. 0.97

  Alignments for each domain:
  == domain 1  score: 99.8 bits;  conditional E-value: 2.7e-32
       SWIRM   1 ps.sewFdpdslhpiEkellselfngk..dktpeeYlkiRnkiialyrenpkeyltvteaqkalkrrrltgidvnllsrihefLerwGlINf 89 
                 p+ ++wFd++ +h+iE+++ +e+f++k  +ktp++Y+++R+++i ++r npk+ylt+t++     rr+l+g dv++++r+h+fLe+wGlIN+
  EPX72638.1  47 PEwAQWFDFSNIHEIERNSNPEFFDSKnsSKTPQVYKEYRDFMICAFRLNPKVYLTFTAC-----RRNLAG-DVCAVLRVHRFLEQWGLINY 132
                 66789*******************888888******************************.....******.*******************8 PP

>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.2   0.0     4e-13   1.2e-09       3      45 ..     280     322 ..     279     323 .. 0.97

  Alignments for each domain:
  == domain 1  score: 38.2 bits;  conditional E-value: 4e-13
                      SSBHHHHHHHHHHHHHHTTCHHHHHHHHTSS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 kWteeEdelLleavkkhGnrWkkIaerlggRtekqcrsrwrny 45 
                       Wt +E +lL+e++ ++ ++W+kI+ ++g++t +qc+++++n+
       EPX72638.1 280 HWTSQEMLLLYEGLDMFPEDWSKISGHVGSKTIEQCILKFLNL 322
                      5****************************************97 PP

>> SWIRM-assoc_1  SWIRM-associated region 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.5   4.1   7.3e-10   2.2e-06      18      82 ..     411     475 ..     406     477 .. 0.95

  Alignments for each domain:
  == domain 1  score: 27.5 bits;  conditional E-value: 7.3e-10
  SWIRM-assoc_1  18 eereiqrlvaqlvetqlkKlelKLkqfeelEklleaerrelekqrqqLlleRlalkkevlkvaek 82 
                    ee+++++ ++++++tqlk ++ KL++f+ l++ ++++ +el+   q+ + e+l +k+e   +++k
     EPX72638.1 411 EEKRMSSTTKEAMDTQLKLIDSKLSHFDYLDQHVRLKSQELDLFAQETYKEKLFMKRECIAAKKK 475
                    9********************************************************99988776 PP

>> Myb_DNA-bind_6  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   3.2e-07   0.00097       1      45 [.     281     324 ..     281     336 .. 0.91

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 3.2e-07
  Myb_DNA-bind_6   1 WteeEdeiLlklvekygndWknIaealnrRtpkqcfdrwknkLrp 45 
                     Wt +E  +L ++  ++  dW++I+ + + +t +qc  +++n L++
      EPX72638.1 281 WTSQEMLLLYEGLDMFPEDWSKISGHVGSKTIEQCILKFLN-LPS 324
                     ***************************99************.854 PP

>> Myb_DNA-bind_7  Myb DNA-binding like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   4.4e-05      0.13       5      50 ..     275     320 ..     273     335 .. 0.88
   2 ?   -1.8   0.1         1     3e+03      49      74 ..     465     491 ..     452     498 .. 0.66

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 4.4e-05
  Myb_DNA-bind_7   5 rkktkkWskeetekFYkaLsqfGtDFsliaklfpkrtrrqlKlKFk 50 
                     +k  ++W+++e  + Y++L +f  D+s i+    ++t +q  lKF 
      EPX72638.1 275 KKDDTHWTSQEMLLLYEGLDMFPEDWSKISGHVGSKTIEQCILKFL 320
                     566789*************************999999999999996 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 1
  Myb_DNA-bind_7  49 FkkEerknpeliekalkkrke.ldlee 74 
                      k+E    +++ie++l+++ +  +++ 
      EPX72638.1 465 MKRECIAAKKKIEQSLQSKDSsSNASP 491
                     466777778888888888877455555 PP

>> Pheromone  Fungal mating-type pheromone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       2.1   6.3e+03      46      59 ..     148     161 ..     136     167 .. 0.72
   2 ?   -1.9   0.0       2.4   7.2e+03      51      60 ..     153     162 ..     147     184 .. 0.61
   3 ?   -3.4   0.0         6   1.8e+04      45      57 ..     245     257 ..     237     265 .. 0.49
   4 ?    0.1   0.0      0.56   1.7e+03      41      61 ..     397     417 ..     354     420 .. 0.67
   5 ?    8.6   0.4    0.0013       3.8       6      42 ..     450     509 ..     434     512 .] 0.84

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 2.1
   Pheromone  46 devlavpvDaErrg 59 
                  ++ ++++D +r+ 
  EPX72638.1 148 TSHFQILADTPRGL 161
                 45888999999986 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 2.4
   Pheromone  51 vpvDaErrgg 60 
                 +++D +r+ +
  EPX72638.1 153 ILADTPRGLA 162
                 5555555433 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 6
   Pheromone  45 ddevlavpvDaEr 57 
                   +v +v  D+Er
  EPX72638.1 245 SHSVCSVCYDQER 257
                 2333344445554 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 0.56
   Pheromone  41 asasddevlavpvDaErrggg 61 
                 ++  +d v + + D+E+r ++
  EPX72638.1 397 DTVNYDIVEDYLLDEEKRMSS 417
                 556678888888888888766 PP

  == domain 5  score: 8.6 bits;  conditional E-value: 0.0013
   Pheromone   6 tLdll.......................asssssaessesalfasssspspspalsssas 42 
                 +Ldl+                        s +s ++ss++++f ss++ ++ pa++ss+ 
  EPX72638.1 450 ELDLFaqetykeklfmkreciaakkkieQSLQSKDSSSNASPFQSSTATPTLPAVHSSSG 509
                 4666677777777777777777777777889**************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (512 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       971  (0.0541581); expected 358.6 (0.02)
Passed bias filter:                      464  (0.0258799); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 3704.46
//
Query:       EPX72639.1  [L=280]
Description: ER protein translocation subcomplex subunit Sec62 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-54  185.2   4.7    2.3e-54  184.2   4.7    1.5  1  Sec62     Translocation protein Sec62
  ------ inclusion threshold ------
       0.21   11.5   2.2       0.46   10.4   2.2    1.5  1  Fig1      Ca2+ regulator and membrane fusion protein Fig1
        1.3    8.7   8.1        1.7    8.3   8.1    1.1  1  PAP1      Transcription factor PAP1
        5.4    6.2   4.8        1.9    7.7   1.9    1.7  2  DUF1356   Protein of unknown function (DUF1356)


Domain annotation for each model (and alignments):
>> Sec62  Translocation protein Sec62
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  184.2   4.7   5.1e-58   2.3e-54       2     214 ..      42     237 ..      41     240 .. 0.90

  Alignments for each domain:
  == domain 1  score: 184.2 bits;  conditional E-value: 5.1e-58
       Sec62   2 kkdffrakkvvralksekekkkskkkkeklkevkkkekaekvfkelkksqlalrveklkekekkkkkeekkkkkkkkkkvkleieeeqefvddnevYvW 100
                 ++ +fr k++ r l s+++  k+ k     ++++++e+a + fk+l+++++++rv+kl  ++kk++             v+l++++ q+f +d+++YvW
  EPX72639.1  42 RVYYFRLKRAYRFLFSDSYPPKKVKG---FPSISTREDAVDLFKLLIMNSMMVRVDKLPPRQKKQQ------------VVELQVNRTQDF-QDDMHYVW 124
                 6789***************9888776...6999999999****************99987766664............89**********.******** PP

       Sec62 101 iYepkqlktlligllvvvailavvlFPLWPaelrkgvyYLSiaalgllglilalaivRlilflivllvtkgklhlWlfPnlfeDvGfldSFrPlYeyee 199
                 +Yep q   +++++l  + +la+vlFPLWP+++rkg++YLS+a lg+++l++al i+R+il++++ lv++++  lWlfPnl +DvGf dSF+P++++++
  EPX72639.1 125 LYEPLQKRVIALAVLFALLVLALVLFPLWPMSMRKGAWYLSMAGLGIIVLFFALVIFRFILYCLTALVASPG--LWLFPNLLADVGFCDSFKPVWAWHS 221
                 ************************************************************************..************************5 PP

       Sec62 200 kd.kkkkkkkkkkkkk 214
                 ++ + k+kk kk+ kk
  EPX72639.1 222 TKsEVKSKKGKKNLKK 237
                 4424444554554444 PP

>> Fig1  Ca2+ regulator and membrane fusion protein Fig1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   2.2    0.0001      0.46      49     131 ..     107     183 ..      95     197 .. 0.69

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.0001
        Fig1  49 slsssssskstsdplnlvelakkfsdnvvhpyllmvaiiLtlllfllllyfplgseipllPfkskavskvalvlsflllllwl 131
                 +  +++ +++ +d++  v+l + ++++v+   +l++ ++L+l+lf l  +    s ++   + s+ +   ++vl f+l+++ +
  EPX72639.1 107 E-LQVNRTQDFQDDMHYVWLYEPLQKRVIALAVLFALLVLALVLFPLWPM----SMRKGAWYLSM-AGLGIIVLFFALVIFRF 183
                 4.56778889999********************************99844....33444444444.44444444444444433 PP

>> PAP1  Transcription factor PAP1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   8.1   0.00038       1.7     117     174 ..     224     277 ..     213     280 .] 0.70

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00038
        PAP1 117 sqsstysansgtstssdSPsssseshqgqlSScgTSPEPstqSPaakksketsstiee 174
                 s+ ++ + +++ ++   SPs+ss ++q+ +  + TS EP  +S ++k++ ++  tiee
  EPX72639.1 224 SEVKSKKGKKNLKK--SSPSASSAEKQS-SAATSTSAEPHYTSTSTKAGPRNP-TIEE 277
                 32333333334444..5******99977.88899*********9999855554.7776 PP

>> DUF1356  Protein of unknown function (DUF1356)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   1.9   0.00043       1.9      69      96 ..     131     158 ..     125     177 .. 0.88
   2 ?   -2.8   0.1      0.67     3e+03      77      99 ..     170     194 ..     157     197 .. 0.60

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.00043
     DUF1356  69 klyvllavliCLllsgLvvffLfPrsia 96 
                 k  + lavl  Ll+ +Lv+f L+P s+ 
  EPX72639.1 131 KRVIALAVLFALLVLALVLFPLWPMSMR 158
                 78899*******************9975 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.67
     DUF1356  77 liCLllsgLvvf..fLfPrsiavep 99 
                  i +l ++Lv+f   L+  + +v  
  EPX72639.1 170 GIIVLFFALVIFrfILYCLTALVAS 194
                 4566777777753256766666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1523  (0.0849462); expected 358.6 (0.02)
Passed bias filter:                      702  (0.0391544); expected 358.6 (0.02)
Passed Vit filter:                        71  (0.00396006); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.29s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 1913.44
//
Query:       EPX72640.1  [L=531]
Description: prevacuole/endosomal FYVE tethering component Pep7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.2e-25   86.9  26.2    6.6e-16   58.2   9.5    3.0  3  FYVE            FYVE zinc finger
    4.1e-13   48.8   3.3      1e-12   47.6   3.3    1.7  1  Rbsn            Rabenosyn Rab binding domain
     0.0023   18.0   5.9     0.0023   18.0   5.9    4.6  4  zf-AN1          AN1-like Zinc finger
  ------ inclusion threshold ------
      0.015   15.5   0.1      0.015   15.5   0.1    3.7  4  zinc_ribbon_9   zinc-ribbon
       0.17   12.2  23.9       0.04   14.1   2.2    4.0  3  IBR             IBR domain, a half RING-finger domain
       0.44   10.6   0.0       0.44   10.6   0.0    4.2  4  zf-C2H2_6       C2H2-type zinc finger
       0.64    9.7   7.5        2.1    8.0   3.7    2.6  2  Siva            Cd27 binding protein (Siva)
       0.91   10.3  17.6          3    8.7   0.5    4.3  4  zinc_ribbon_15  zinc-ribbon family
        1.1    9.8   0.0        1.1    9.8   0.0    5.9  6  zf-C2H2         Zinc finger, C2H2 type
        1.5    9.9   0.0        1.5    9.9   0.0    6.5  7  zf-C2H2_4       C2H2-type zinc finger
        1.6    8.2  20.2        1.1    8.8   3.3    4.5  4  zf-ribbon_3     zinc-ribbon domain
        1.7    9.0   9.6       0.97    9.8   0.1    3.2  2  zf-Di19         Drought induced 19 protein (Di19), zinc-bindi
        8.7    6.4   7.3          1    9.3   1.8    2.4  2  cEGF            Complement Clr-like EGF-like


Domain annotation for each model (and alignments):
>> FYVE  FYVE zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1       5.7   7.9e+03       9      16 ..      35      42 ..      27      48 .. 0.70
   2 !   37.5   4.7   1.4e-12     2e-09       2      65 ..     128     197 ..     127     199 .. 0.86
   3 !   58.2   9.5   4.8e-19   6.6e-16       2      66 ..     269     329 ..     268     331 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 5.7
                -SB-TTT- CS
        FYVE  9 vkkCeiCa 16
                + +C+iC 
  EPX72640.1 35 SVECPICG 42
                45666665 PP

  == domain 2  score: 37.5 bits;  conditional E-value: 1.4e-12
                 ---...--SB-TT..T--B--SSS--EE-TTT--EE-STTS-EEE.EEGGGTEEEEE....EE-HHHHHH CS
        FYVE   2 kwkddsevkkCei..CakkFsllrrrhhCrlCGkvvCekCssklvallekeaeeksv....rvCkeClae 65 
                 +w+++ +  kC+   C+k  ++++ r hCr CG v+C+ ++  +++l  +++ + +     rvCk+C+++
  EPX72640.1 128 HWQPEVADMKCHDptCDKVLNFVNGRIHCRKCGYVFCNYHTLYQAKLSVSASYDPDFgfwsRVCKQCYEN 197
                 8**********9888*************************988887776666655556666******986 PP

  == domain 3  score: 58.2 bits;  conditional E-value: 4.8e-19
                 ---...--SB-TTT--B--SSS--EE-TTT--EE-STTS-EEE.EEGGGTEEEEEEE-HHHHHHH CS
        FYVE   2 kwkddsevkkCeiCakkFsllrrrhhCrlCGkvvCekCssklvallekeaeeksvrvCkeClael 66 
                 +w+ddsev++C++C++ F+l+rrr hCrlCG+vvC+ C  + ++l    ++ +++ +C++C +++
  EPX72640.1 269 NWQDDSEVETCPECNNGFTLTRRRRHCRLCGRVVCRFCVLEILHL----NQLQNLLICNSCNQNY 329
                 8***************************************99955....589999******9986 PP

>> Rbsn  Rabenosyn Rab binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.6   3.3   7.3e-16     1e-12       1      42 []     480     521 ..     480     521 .. 0.97

  Alignments for each domain:
  == domain 1  score: 47.6 bits;  conditional E-value: 7.3e-16
        Rbsn   1 vLeEQkflveemIkqAkkarrfDEvatLeeNLkELqeEidrl 42 
                 v+eEQ flve+mI+ Ak +r+f Ev++L ++Lk Lq+Ei++l
  EPX72640.1 480 VIEEQVFLVENMIRKAKLKRNFSEVEILMQSLKPLQDEIQKL 521
                 89*************************************985 PP

>> zf-AN1  AN1-like Zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.3       1.5     2e+03       9      21 ..      34      43 ..      27      44 .. 0.69
   2 !   18.0   5.9   1.7e-06    0.0023       1      31 [.     138     171 ..     138     172 .. 0.91
   3 ?    0.2   7.2      0.63   8.7e+02       5      25 ..     281     304 ..     273     313 .. 0.78
   4 ?    1.6   1.1      0.23   3.2e+02      13      23 ..     319     329 ..     306     330 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 1.5
      zf-AN1  9 kdflpfkCryCgk 21
                k   +++C+ Cg 
  EPX72640.1 34 K---SVECPICGL 43
                3...379****85 PP

  == domain 2  score: 18.0 bits;  conditional E-value: 1.7e-06
      zf-AN1   1 CsfksCkkkdflp...fkCryCgkvFClkHrlpe 31 
                 C+ ++C k ++ +   ++Cr+Cg vFC  H l++
  EPX72640.1 138 CHDPTCDKVLNFVngrIHCRKCGYVFCNYHTLYQ 171
                 999*******777799**************9875 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.63
      zf-AN1   5 sCkkkdflp...fkCryCgkvFCl 25 
                 +C++  +l     +Cr Cg+v C 
  EPX72640.1 281 ECNNGFTLTrrrRHCRLCGRVVCR 304
                 57777765566799*********6 PP

  == domain 4  score: 1.6 bits;  conditional E-value: 0.23
      zf-AN1  13 pfkCryCgkvF 23 
                    C++C++++
  EPX72640.1 319 LLICNSCNQNY 329
                 478******98 PP

>> zinc_ribbon_9  zinc-ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.3       1.4     2e+03      22      28 ..      37      42 ..      24      44 .. 0.77
   2 ?   -2.8   0.0       6.1   8.3e+03      13      27 ..     175     194 ..     171     196 .. 0.63
   3 ?   15.5   0.1   1.1e-05     0.015      16      31 ..     270     286 ..     266     287 .. 0.84
   4 ?    0.8   0.0      0.45   6.2e+02      22      29 ..     320     327 ..     309     330 .. 0.74

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 1.4
  zinc_ribbon_9 22 vlCPhCg 28
                     CP Cg
     EPX72640.1 37 E-CPICG 42
                   4.****7 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 6.1
  zinc_ribbon_9  13 svspdedsd......vlCPhC 27 
                    svs++ d+d      v C +C
     EPX72640.1 175 SVSASYDPDfgfwsrV-CKQC 194
                    5556666666677534.8888 PP

  == domain 3  score: 15.5 bits;  conditional E-value: 1.1e-05
  zinc_ribbon_9  16 pdedsdv.lCPhCgggF 31 
                    + +ds+v +CP+C++gF
     EPX72640.1 270 WQDDSEVeTCPECNNGF 286
                    56788888********* PP

  == domain 4  score: 0.8 bits;  conditional E-value: 0.45
  zinc_ribbon_9  22 vlCPhCgg 29 
                     +C++C++
     EPX72640.1 320 LICNSCNQ 327
                    47****96 PP

>> IBR  IBR domain, a half RING-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.2         2   2.8e+03      36      45 ..      33      42 ..      15      45 .. 0.67
   2 ?   14.1   2.2   2.9e-05      0.04      20      50 ..     137     165 ..     128     169 .. 0.89
   3 ?    5.1   8.8     0.019        26      12      53 ..     268     307 ..     257     329 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 2
         IBR 36 cksvtCskCg 45
                +ksv+C+ Cg
  EPX72640.1 33 QKSVECPICG 42
                4558888887 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 2.9e-05
         IBR  20 wCprpdCeaiieksegcksvtCskCgfefCf 50 
                 +C  p C++++   +g  +++C+kCg+ fC 
  EPX72640.1 137 KCHDPTCDKVLNFVNG--RIHCRKCGYVFCN 165
                 7**********99999..677*********7 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.019
         IBR  12 les..dpnlkwCprpdCeaiieksegcksvtCskCgfefCfnCk 53 
                 +++  d+++  Cp  +C++ +  +    +  C+ Cg   C  C 
  EPX72640.1 268 VNWqdDSEVETCP--ECNNGFTLTRRRRH--CRLCGRVVCRFCV 307
                 444226679****..**********9777..*********9996 PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00032      0.44       3      20 ..      37      54 ..      37      59 .. 0.92
   2 ?   -1.4   0.8       1.8   2.5e+03       3       8 ..     190     195 ..     189     196 .. 0.82
   3 ?    1.9   0.2      0.17   2.3e+02       4      11 ..     279     286 ..     278     287 .. 0.88
   4 ?   -3.5   0.8       8.2   1.1e+04       3       8 ..     321     326 ..     321     327 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00032
   zf-C2H2_6  3 eCsvCsksFpslqaLggH 20
                eC++C+ ++p lq+L+ H
  EPX72640.1 37 ECPICGLELPNLQSLNDH 54
                8***************99 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1.8
   zf-C2H2_6   3 eCsvCs 8  
                 +C++C+
  EPX72640.1 190 VCKQCY 195
                 6****7 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.17
   zf-C2H2_6   4 CsvCsksF 11 
                 C++C++ F
  EPX72640.1 279 CPECNNGF 286
                 *****998 PP

  == domain 4  score: -3.5 bits;  conditional E-value: 8.2
   zf-C2H2_6   3 eCsvCs 8  
                 +C+ C+
  EPX72640.1 321 ICNSCN 326
                 6****8 PP

>> Siva  Cd27 binding protein (Siva)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.1      0.09   1.2e+02      94     134 ..     125     165 ..     111     178 .. 0.84
   2 ?    8.0   3.7    0.0015       2.1     122     169 ..     276     326 ..     266     330 .. 0.72

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.09
        Siva  94 iralaqsseasptgasiacsscvrsvddkavcsqcerllck 134
                 +r + q + a++ +   +c      v+++  c +c  + c+
  EPX72640.1 125 TREHWQPEVADMKCHDPTCDKVLNFVNGRIHCRKCGYVFCN 165
                 66677888889999999999999999999999999999996 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0015
        Siva 122 kavcsqcer.llckqcvrtcsscsalacslctlvdys..deyekvlctscs 169
                  ++c  c+  +  ++  r c  c+ ++c +c l      +  + ++c sc 
  EPX72640.1 276 VETCPECNNgFTLTRRRRHCRLCGRVVCRFCVLEILHlnQLQNLLICNSCN 326
                 5789999872455677899************87543321445556799996 PP

>> zinc_ribbon_15  zinc-ribbon family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1       3.7   5.1e+03      65      73 ..      35      43 ..      10      50 .. 0.59
   2 ?    4.3   0.6     0.051        71      38      73 ..     154     196 ..     141     201 .. 0.75
   3 ?    7.3   0.6    0.0059       8.2      52      86 .]     263     299 ..     248     299 .. 0.68
   4 ?    8.7   0.5    0.0021         3      20      55 ..     302     337 ..     300     346 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 3.7
  zinc_ribbon_15 65 kkeCknCgk 73
                    + eC+ Cg 
      EPX72640.1 35 SVECPICGL 43
                    556666665 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.051
  zinc_ribbon_15  38 lacskCkslleaskelgkeiekkesse.......kkeCknCgk 73 
                     ++c+kC++++ + ++l ++  + ++s        +++Ck+C +
      EPX72640.1 154 IHCRKCGYVFCNYHTLYQAKLSVSASYdpdfgfwSRVCKQCYE 196
                     79*****998877754444333333336999**99******65 PP

  == domain 3  score: 7.3 bits;  conditional E-value: 0.0059
  zinc_ribbon_15  52 elgkeiekkessekkeCknCgk..eveeefkyCpkCg 86 
                      +++ ++ +++se+++C++C++  +++ + ++C  Cg
      EPX72640.1 263 MEQEIVNWQDDSEVETCPECNNgfTLTRRRRHCRLCG 299
                     22333344555669******87335678899**9998 PP

  == domain 4  score: 8.7 bits;  conditional E-value: 0.0021
  zinc_ribbon_15  20 vlklffipvfkwkkkkpylacskCkslleaskelgk 55 
                     v++++ ++++++++ + +l c++C++++ +  + +k
      EPX72640.1 302 VCRFCVLEILHLNQLQNLLICNSCNQNYFKTISFQK 337
                     799**********************99876655444 PP

>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0   0.00081       1.1       2      23 .]      37      59 ..      36      59 .. 0.94
   2 ?    0.5   0.3      0.72   9.9e+02       2       9 ..     137     146 ..     136     149 .. 0.86
   3 ?    4.9   1.6      0.03        42       3      16 ..     156     169 ..     154     171 .. 0.88
   4 ?    0.9   0.2      0.57   7.9e+02       2      11 ..     278     287 ..     278     292 .. 0.83
   5 ?   -2.3   2.7       5.9   8.2e+03       3      12 ..     295     304 ..     294     308 .. 0.83
   6 ?   -2.6   0.2       7.3     1e+04       3      10 ..     322     329 ..     321     336 .. 0.76

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00081
                EETTTTEEESSHHHHHHHHHC.C CS
     zf-C2H2  2 kCpdCgksFkrksnLkrHirt.H 23
                +Cp+Cg   ++  +L+ Hi + H
  EPX72640.1 37 ECPICGLELPNLQSLNDHIDItH 59
                6******************9888 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.72
                 EET..TTTEE CS
     zf-C2H2   2 kCp..dCgks 9  
                 kC+   C+k+
  EPX72640.1 137 KCHdpTCDKV 146
                 8**99***98 PP

  == domain 3  score: 4.9 bits;  conditional E-value: 0.03
                 ETTTTEEESSHHHH CS
     zf-C2H2   3 CpdCgksFkrksnL 16 
                 C +Cg++F++ + L
  EPX72640.1 156 CRKCGYVFCNYHTL 169
                 *********98877 PP

  == domain 4  score: 0.9 bits;  conditional E-value: 0.57
                 EETTTTEEES CS
     zf-C2H2   2 kCpdCgksFk 11 
                 +Cp+C+  F+
  EPX72640.1 278 TCPECNNGFT 287
                 7****97775 PP

  == domain 5  score: -2.3 bits;  conditional E-value: 5.9
                 ETTTTEEESS CS
     zf-C2H2   3 CpdCgksFkr 12 
                 C  Cg++ +r
  EPX72640.1 295 CRLCGRVVCR 304
                 999**98765 PP

  == domain 6  score: -2.6 bits;  conditional E-value: 7.3
                 ETTTTEEE CS
     zf-C2H2   3 CpdCgksF 10 
                 C+ C++ +
  EPX72640.1 322 CNSCNQNY 329
                 99999765 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0    0.0011       1.5       2      21 ..      37      56 ..      36      59 .. 0.89
   2 ?    4.3   1.4     0.066        91       2      16 ..     155     169 ..     154     171 .. 0.86
   3 ?   -1.3   0.1       4.3   5.9e+03       2       7 ..     190     195 ..     189     204 .. 0.76
   4 ?    3.2   2.9      0.15   2.1e+02       2      21 ..     278     296 ..     278     298 .. 0.81
   5 ?   -0.3   3.3         2   2.8e+03       2      16 ..     294     308 ..     293     315 .. 0.72
   6 ?    0.1   0.2       1.5   2.1e+03       2      10 ..     321     329 ..     320     336 .. 0.78
   7 ?   -1.6   0.1       5.1     7e+03       5      20 ..     425     440 ..     422     442 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.0011
   zf-C2H2_4  2 kCpiCgksFsskkaLlrHlk 21
                +CpiCg   ++ ++L++H+ 
  EPX72640.1 37 ECPICGLELPNLQSLNDHID 56
                7*****************86 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.066
   zf-C2H2_4   2 kCpiCgksFsskkaL 16 
                  C+ Cg +F+++++L
  EPX72640.1 155 HCRKCGYVFCNYHTL 169
                 6********999987 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 4.3
   zf-C2H2_4   2 kCpiCg 7  
                  C++C 
  EPX72640.1 190 VCKQCY 195
                 599994 PP

  == domain 4  score: 3.2 bits;  conditional E-value: 0.15
   zf-C2H2_4   2 kCpiCgksFsskkaLlrHlk 21 
                 +Cp C+  F + ++ +rH++
  EPX72640.1 278 TCPECNNGF-TLTRRRRHCR 296
                 5********.6666588987 PP

  == domain 5  score: -0.3 bits;  conditional E-value: 2
   zf-C2H2_4   2 kCpiCgksFsskkaL 16 
                  C++Cg++ ++ + L
  EPX72640.1 294 HCRLCGRVVCRFCVL 308
                 6****9999766655 PP

  == domain 6  score: 0.1 bits;  conditional E-value: 1.5
   zf-C2H2_4   2 kCpiCgksF 10 
                 +C  C++++
  EPX72640.1 321 ICNSCNQNY 329
                 7****8877 PP

  == domain 7  score: -1.6 bits;  conditional E-value: 5.1
   zf-C2H2_4   5 iC..gksFsskkaLlrHl 20 
                 +C  gksF   +aL  Hl
  EPX72640.1 425 VCaeGKSFLQETAL--HL 440
                 67889999888888..65 PP

>> zf-ribbon_3  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.1     0.024        33       4       9 ..      37      42 ..      35      45 .. 0.64
   2 ?    5.5   0.4    0.0085        12      16      25 ..     153     162 ..     141     163 .. 0.82
   3 ?    8.8   3.3   0.00078       1.1       4      23 ..     278     299 ..     275     306 .. 0.93
   4 ?   -1.0   0.5      0.93   1.3e+03       5      10 ..     322     327 ..     320     328 .. 0.80

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.024
  zf-ribbon_3  4 rCPnCG 9 
                 +CP CG
   EPX72640.1 37 ECPICG 42
                 566666 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.0085
  zf-ribbon_3  16 dnvCpyCGtk 25 
                   ++C +CG++
   EPX72640.1 153 RIHCRKCGYV 162
                  589*****98 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.00078
  zf-ribbon_3   4 rCPnCGa.p.lssddnvCpyCG 23 
                  +CP+C++   l+ + ++C  CG
   EPX72640.1 278 TCPECNNgFtLTRRRRHCRLCG 299
                  8********************9 PP

  == domain 4  score: -1.0 bits;  conditional E-value: 0.93
  zf-ribbon_3   5 CPnCGa 10 
                  C++C++
   EPX72640.1 322 CNSCNQ 327
                  999987 PP

>> zf-Di19  Drought induced 19 protein (Di19), zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.1   0.00071      0.97       2      28 ..      35      62 ..      34      67 .. 0.79
   2 ?   -1.0   6.2       1.6   2.3e+03       4      37 ..     278     306 ..     275     337 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00071
     zf-Di19  2 sftCPyCgke.ltvkeLveHvedeHrve 28
                s+ CP Cg e  + ++L +H++  H   
  EPX72640.1 35 SVECPICGLElPNLQSLNDHIDITHITP 62
                6789999996468899999999999765 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 1.6
     zf-Di19   4 tCPyCgkeltvkeLveHvedeHrveskevvCPvC 37 
                 tCP C++++t ++  +H+          vvC  C
  EPX72640.1 278 TCPECNNGFTLTRRRRHCRL-----CGRVVCRFC 306
                 8********99997777754.....445555555 PP

>> cEGF  Complement Clr-like EGF-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   1.8   0.00074         1       3      20 ..     278     296 ..     278     296 .. 0.93
   2 ?   -2.3   0.3       3.2   4.4e+03       3       9 ..     423     429 ..     423     429 .. 0.89

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00074
                 EE.E-STTEEE.ETTTEEE CS
        cEGF   3 rC.sCppGYkltpdGrsCt 20 
                 +C +C++G++lt   r+C+
  EPX72640.1 278 TCpECNNGFTLTRRRRHCR 296
                 6989**************6 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 3.2
                 EEE-STT CS
        cEGF   3 rCsCppG 9  
                 +C C +G
  EPX72640.1 423 HCVCAEG 429
                 8***988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (531 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1907  (0.106364); expected 358.6 (0.02)
Passed bias filter:                      617  (0.0344135); expected 358.6 (0.02)
Passed Vit filter:                        82  (0.0045736); expected 17.9 (0.001)
Passed Fwd filter:                        29  (0.00161749); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.84u 0.36s 00:00:01.20 Elapsed: 00:00:00.64
# Mc/sec: 2481.89
//
Query:       EPX72641.1  [L=222]
Description: SNARE Slt1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.2e-14   53.8   7.0      3e-14   53.4   7.0    1.3  1  Use1          Membrane fusion protein Use1
  ------ inclusion threshold ------
       0.14   11.9   9.2      0.038   13.7   4.5    2.4  2  Lectin_N      Hepatic lectin, N-terminal domain
        2.9    8.0   8.7        5.6    7.1   8.7    1.4  1  MnmE_helical  MnmE helical domain
        5.1    7.5   9.5         15    6.0   7.0    2.1  2  DUF3740       Sulfatase protein


Domain annotation for each model (and alignments):
>> Use1  Membrane fusion protein Use1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.4   7.0   6.6e-18     3e-14     113     245 ..      83     216 ..      17     218 .. 0.77

  Alignments for each domain:
  == domain 1  score: 53.4 bits;  conditional E-value: 6.6e-18
        Use1 113 ekakyqkelrkellgkndsssspekekeskkkksdedldavlkkhenlqEklaeemlsLarnLKenslaasqiikkDtetlsksekaadqnlaslkkes 211
                 e +  +ke+ +   ++ ++ +++e +++++++ ++   +++l++++++q ++ + +l++a  LKen+    + + +D++++++   + d+n +sl++  
  EPX72641.1  83 EIN-IKKEQEEAAASTMEEIRKREINERQQEQHLQFGNSQLLNHQRSVQADISDSLLHMASILKENAISFTNALVNDNQVVERAGSLLDKNAKSLDNTH 180
                 222.22333333344444444444444444447788889************************************************************ PP

        Use1 212 erleeh.skskvkcllwl.llfvvlvvFismvlfir 245
                 + +++  +++k + +l + ++ +v+++F+ m ++++
  EPX72641.1 181 QNVKDFtKSKKLSFWLQIgMVLAVVISFLVMMFILQ 216
                 *****6588888887766266678899999988776 PP

>> Lectin_N  Hepatic lectin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   4.5   8.5e-06     0.038      53     119 ..      79     145 ..      62     149 .. 0.89
   2 ?    0.0   0.2      0.15   6.7e+02      60     101 ..     144     185 ..     142     205 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 8.5e-06
    Lectin_N  53 LqreLetLketfsnfssstlaeiqalssqggslsekvtsleaklekkqqdlkadhselllhvkqlvk 119
                 + +e   +k++ ++ ++st+ ei++ + + ++ +++++  +++l ++q++++ad s+ llh+  + k
  EPX72641.1  79 IEQEEINIKKEQEEAAASTMEEIRKREINERQQEQHLQFGNSQLLNHQRSVQADISDSLLHMASILK 145
                 55555667888899999********************************************987655 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.15
    Lectin_N  60 Lketfsnfssstlaeiqalssqggslsekvtsleaklekkqq 101
                 Lke+   f++    + q ++ +g+ l+++ +sl+ + ++ + 
  EPX72641.1 144 LKENAISFTNALVNDNQVVERAGSLLDKNAKSLDNTHQNVKD 185
                 677777777777777788888888888888888877666554 PP

>> MnmE_helical  MnmE helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   8.7    0.0013       5.6      30     104 ..      57     131 ..      54     200 .. 0.62

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0013
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...x RF
  MnmE_helical  30 lskkikelrekllellaeleaaiDFpeedleelseeelaekleelkeelekllatakrgellreGikDllkeke...e 104
                   lsk+i +l+ k+ +l++ lea+i+ +e ++++ +ee++a+++ee+++   + +++ ++ + l+ G + ll++++   +
    EPX72641.1  57 LSKRIMTLQGKINDLRVALEAKIEQEEINIKKEQEEAAASTMEEIRK---REINERQQEQHLQFGNSQLLNHQRsvqA 131
                   89***********************9988888888888888888775...5677777888888888866666554432 PP

>> DUF3740  Sulfatase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.1     0.052   2.3e+02     116     129 ..      59      72 ..      55      74 .. 0.89
   2 ?    6.0   7.0    0.0034        15      16     136 ..      78     191 ..      70     193 .. 0.69

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.052
     DUF3740 116 keIelLkdKiknLk 129
                 k I +L+ Ki++L+
  EPX72641.1  59 KRIMTLQGKINDLR 72 
                 7899*********8 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.0034
     DUF3740  16 elegevydvel.eeeeqplemrnllkrhaevdlledeeeeeeeeeessgteskrdssnslsnpalakVihrCfvlandtVkCsdviyesekaWkdsklq 113
                 ++e e  +++  +ee  + +m+++ kr+        +e ++e++ ++ ++ ++ +++ s+  + +    h  ++l+++ +   + + ++ +   +  + 
  EPX72641.1  78 KIEQEEINIKKeQEEAAASTMEEIRKREI-------NERQQEQHLQFGNS-QLLNHQRSVQADISDSLLHMASILKENAISFTNALVNDNQVVERAGSL 168
                 23333333333334444455555555552.......22333333455443.444557889999999999****************************** PP

     DUF3740 114 iDkeIelLkdKiknLkevkghlr 136
                 +Dk+ + L +  +n k++ +  +
  EPX72641.1 169 LDKNAKSLDNTHQNVKDFTKSKK 191
                 *****************988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2318  (0.129288); expected 358.6 (0.02)
Passed bias filter:                      786  (0.0438396); expected 358.6 (0.02)
Passed Vit filter:                        88  (0.00490825); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.31s 00:00:00.82 Elapsed: 00:00:00.45
# Mc/sec: 1487.91
//
Query:       EPX72642.1  [L=134]
Description: 40S ribosomal protein S24 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-34  118.1   0.0    1.8e-34  117.5   0.0    1.4  1  Ribosomal_S24e  Ribosomal protein S24e


Domain annotation for each model (and alignments):
>> Ribosomal_S24e  Ribosomal protein S24e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.5   0.0     1e-38   1.8e-34       1      75 [.      24      98 ..      24     114 .. 0.97

  Alignments for each domain:
  == domain 1  score: 117.5 bits;  conditional E-value: 1e-38
                    EEEEE-SSS-S--HHHHHHHHHHHHTS-CTTEEEEEEEE-SSSSEEEEEEEEES-HHHHHHHS-HHHHHHTTSS- CS
  Ribosomal_S24e  1 vvdvlHpgkatpskteireklakmykvdpdlvvvfgfrthfGggkttGfakiYdsleaakkfEpkhrlaRnglae 75
                    vvd+lHpgka+ sk+e+rekla+myk+d+d +  fg+rt+fGgg++tGfa+iYds ea+kkfEp++rl+R g a+
      EPX72642.1 24 VVDILHPGKANLSKNELREKLAQMYKADADSITAFGLRTQFGGGRSTGFALIYDSNEAMKKFEPHYRLVRVGQAQ 98
                    79********************************************************************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       671  (0.0374254); expected 358.6 (0.02)
Passed bias filter:                      306  (0.0170673); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.26s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 1001.88
//
Query:       EPX72643.1  [L=769]
Description: rhophilin-2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.8e-93  311.0   1.0    1.8e-92  310.1   1.0    1.5  1  BRO1            BRO1-like domain
    9.4e-38  130.2  16.9    9.4e-38  130.2  16.9    1.8  2  ALIX_LYPXL_bnd  ALIX V-shaped domain binding to HIV
  ------ inclusion threshold ------
       0.15   12.4   2.2        1.4    9.3   0.6    3.2  3  SbcD_C          Type 5 capsule protein repressor C-terminal d


Domain annotation for each model (and alignments):
>> BRO1  BRO1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  310.1   1.0   3.1e-96   1.8e-92       4     388 ..      11     392 ..       8     393 .. 0.90

  Alignments for each domain:
  == domain 1  score: 310.1 bits;  conditional E-value: 3.1e-96
                 XXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.....XXXX.XXXXXXXXXXXXXXXXXXXXXXX.XXX.XXXXXXXXXXX.XXX CS
        BRO1   4 iplKkteekevdlkkpLknyIsetygsqdpeafeddlaelnklRqdavrksankdsesglelllkYyaqLellelrfpi.eeqslkveFtWydaf.sss 100
                 ++ K+t  k++d+++p++ ++s+ yg  ++ +++d+++++n+lR++++   a+ d +sg +++++Yy+qL++l+ rfp    + +++ F+W+d++ + +
  EPX72643.1  11 LKKKET--KRIDWVEPFTAFVSRVYG--NSIDIDDEIKSFNTLRDNMLG--AD-DASSGKNVIYSYYGQLDYLSFRFPTgG-NGINIIFEWNDSLsKGD 101
                 445555..77***************8..5788**************883..54.56999********************54.447**********6445 PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXX.X..XXX.XXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        BRO1 101 kkvtqsslafEkasvLFniaalysqlaas.qnrstdeglkrackyfqqAAgvfqylkenflhapteeesedlspetlkaLeklmlAqAqecflekaikd 198
                   ++qsslafE+a+vLFn+a l+s laa   +r+t +++k+a++y+q+A+g+f++++e+flhap     +d+++++l   ++l lAqAqec+l  + ++
  EPX72643.1 102 LWYKQSSLAFERACVLFNLAGLLSRLAAThATRHTVQDYKQAANYLQCASGIFKMIRESFLHAP----GDDFESQFLLGVHHLLLAQAQECVLGHMSMS 196
                 689***********************976589********************************....99**************************669 PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXX.......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....... CS
        BRO1 199 nkkdsliaKlaaqvaelYeealealkkselidekeevlkklldksWikhvqvKashfkAlaqyrqalaaeeakkyGeeiarlqkAlellkea....... 290
                 +++ sl aK+aa++a+lYe++l+++++ + +           +  ++++ ++K++  + l++y +a ++++++kyG +i++++kA+++l+         
  EPX72643.1 197 KMSMSLAAKIAASAANLYESSLRSFESMDSSP----------NAFFVSLSSAKHQTLEGLSCYLMAESCKQDSKYGLAIGFYNKAKSMLQAGqksfswi 285
                 *************************6555444..........4789***************************************************** PP

                 .......X...........X.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXHHHHHHH CS
        BRO1 291 .......lkskkaeelledl.kglkdvveeklkeaekDNdlIYheevPsesslpeikkaslvkaiplee..ekeeekseesgkdlFakLvPlsvheaas 379
                        + +++++e++++l k++k++++ ++++ ekDNd++Yhe+v  e++lp+i+++++   ++l +  + +e++++++g+dlF+ +vP++v+ a+s
  EPX72643.1 286 kadssfiH-KQSTTEYTDSLsKFIKENLRGSITSTEKDNDFVYHEPVIREAELPHIQPLQALPYLTLDKlyNGKETAKSVIGEDLFKAFVPTAVTTAIS 383
                 **999953.45556676666156699*****************************************66654458899********************* PP

                 HHHHHHHHH CS
        BRO1 380 ayserkakl 388
                 +yse+ akl
  EPX72643.1 384 LYSEETAKL 392
                 ******997 PP

>> ALIX_LYPXL_bnd  ALIX V-shaped domain binding to HIV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1      0.21   1.2e+03     192     236 ..     384     427 ..     360     446 .. 0.65
   2 !  130.2  16.9   1.6e-41   9.4e-38      20     295 .]     446     743 ..     431     743 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.21
  ALIX_LYPXL_bnd 192 lfeeele.kydplqeqleqslakqeellkeiqeaneefeqskksds 236
                     l+ ee    +++ qe++e ++ +  ++ ++++   e +++  +sds
      EPX72643.1 384 LYSEETAkLFRSEQEEVERQNTQLATVFATLD--IEHLQELTRSDS 427
                     44555555888888888888888888888776..344444444444 PP

  == domain 2  score: 130.2 bits;  conditional E-value: 1.6e-41
  ALIX_LYPXL_bnd  20 qrlekllqdlqelkerneeiLdeieklLdeEesedeklrakygtrWtrqpSseltaelraelqkyreileeAsesDkivrqklqenkedlelLsg 114
                     q++ + ++ l+e   + ++ L++ e++Ld+E+ e++k+ +++gt Wt +pS+  +a++r+++ ++ + le+A++ Dk + q++q++ked+e L+ 
      EPX72643.1 446 QQFPEKFHMLKEIPVQLKRNLTQLESELDKESLENSKMNSRFGTAWTLSPSQVFAAPYRQQIHSFFQDLEKAASIDKAIFQQYQSIKEDIETLCD 540
                     66667788889999999999*************************************************************************97 PP

  ALIX_LYPXL_bnd 115 peeeleaa.....lpssssa..................aasesveeqirklrsllekldelkaereqllkdlkekaendDitpklltekkrdiaa 186
                     + ++++a+     +     +                  + + +++ q+  l++l +++++l   re +lk l+ek+ +dD++++l++++ ++ + 
      EPX72643.1 541 S-NKIDALfgsamV-----SlmespnvpnlldlpddniELEREMKIQLDLLEELQARVQKLVPHREATLKTLQEKCLHDDVSEALMQNTNKAESS 629
                     6.555555265532.....122224567777776554323788888899*************************************999995555 PP

  ALIX_LYPXL_bnd 187 nefealfeeelekydplqeqleqslakqeellkeiqeaneefeqskksdseq..s...qrqreevlqkleaaydkykelksnleeglkFYndlte 276
                      ++e+lf+++l+k+dpl+++l+ s ++q+ l+ e ++a+++++++ + +++   +     ++++v+ +l ++  + + + ++++ g ++Y +l+ 
      EPX72643.1 630 ISMEQLFAQQLKKFDPLRNRLHGSYRQQQLLVGEMRNAVQKLKRNPNFNRKLdiYnqsFTKNKDVSVRLLSSAITANAIAEGISNGSNYYRSLEL 724
                     556*********************************************9977763555778999******************************* PP

  ALIX_LYPXL_bnd 277 lleklqkkvkdfvfaRrtE 295
                     +le+++++ k+ +  Rr+E
      EPX72643.1 725 KLEEFESQLKKRLLSRRKE 743
                     ****************998 PP

>> SbcD_C  Type 5 capsule protein repressor C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1       0.3   1.8e+03      68      93 ..     468     505 ..     432     506 .. 0.60
   2 ?    9.3   0.6   0.00023       1.4      36      92 ..     583     641 ..     525     642 .. 0.83
   3 ?   -0.6   0.0      0.29   1.7e+03      22      46 ..     714     738 ..     699     754 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.3
      SbcD_C  68 aeleqeaeetla............elspeevFerflae 93 
                 + +++ ++e+l+            +lsp +vF+  +++
  EPX72643.1 468 QLESELDKESLEnskmnsrfgtawTLSPSQVFAAPYRQ 505
                 33444444444433333444455588888888887776 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00023
      SbcD_C  36 dplpdlrerlrellegipvevlrlrrtr...ekasaeleqeaeetlaelspeevFerfla 92 
                 d l++l++r+++l++++++ +  l +++   ++ s++l+q +++  + +s e++F++ l+
  EPX72643.1 583 DLLEELQARVQKLVPHREATLKTL-QEKclhDDVSEALMQNTNKAESSISMEQLFAQQLK 641
                 56889************9984444.444675444899999999999999******98776 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.29
      SbcD_C  22 sekpawlevevtdedplpdlrerlr 46 
                 ++ + +  +e++ e+ +++l++rl 
  EPX72643.1 714 NGSNYYRSLELKLEEFESQLKKRLL 738
                 5567788899***********9984 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (769 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1086  (0.0605723); expected 358.6 (0.02)
Passed bias filter:                      473  (0.0263818); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.71u 0.29s 00:00:01.00 Elapsed: 00:00:00.45
# Mc/sec: 5151.79
//
Query:       EPX72644.1  [L=377]
Description: farnesyltransferase beta subunit Cpp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.3e-36  122.3  14.0    2.6e-10   39.9   0.6    6.1  6  Prenyltrans      Prenyltransferase and squalene oxidase repea
    4.7e-05   22.6   0.0     0.0061   15.7   0.0    2.2  2  SQHop_cyclase_C  Squalene-hopene cyclase C-terminal domain


Domain annotation for each model (and alignments):
>> Prenyltrans  Prenyltransferase and squalene oxidase repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0     0.055     5e+02      31      43 ..      59      71 ..      37      72 .. 0.76
   2 !    9.6   0.1   8.5e-05      0.77      14      43 ..      88     119 ..      83     120 .. 0.86
   3 !   35.3   0.0   7.8e-13     7e-09       1      44 []     128     171 ..     128     171 .. 0.98
   4 !   39.9   0.6   2.9e-14   2.6e-10       7      43 ..     183     219 ..     179     220 .. 0.95
   5 !   17.7   0.3   2.5e-07    0.0022       2      37 ..     226     262 ..     225     264 .. 0.90
   6 !   23.9   0.0   2.9e-09   2.6e-05       4      41 ..     288     326 ..     286     328 .. 0.94

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.055
                 HHHHHHHHHHHHC CS
  Prenyltrans 31 yytywalaaLall 43
                 +  yw l++La +
   EPX72644.1 59 WMVYWELNSLAVM 71
                 6679******988 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 8.5e-05
                  SH..TTS-BBSSTTSSBBHHHHHHHHHHHHHC CS
  Prenyltrans  14 Qn..edGGwggrpgsesdtyytywalaaLall 43 
                  Q   + GG++g  g e ++  ty a+++ +++
   EPX72644.1  88 QLrgKNGGFCGGNGQEEHVLSTYAAVLSICIC 119
                  455689******99999*********998877 PP

  == domain 3  score: 35.3 bits;  conditional E-value: 7.8e-13
                  HHHHHHHHHHHHHSHTTS-BBSSTTSSBBHHHHHHHHHHHHHCT CS
  Prenyltrans   1 idvekavefLlscQnedGGwggrpgsesdtyytywalaaLallG 44 
                  id++k+v++L+s  n+dG+++ + ++esd++ +y ++++++llG
   EPX72644.1 128 IDKAKLVQWLYSLKNADGSFRVNHEGESDARSAYAVVCVASLLG 171
                  79****************************************98 PP

  == domain 4  score: 39.9 bits;  conditional E-value: 2.9e-14
                  HHHHHHHSHTTS-BBSSTTSSBBHHHHHHHHHHHHHC CS
  Prenyltrans   7 vefLlscQnedGGwggrpgsesdtyytywalaaLall 43 
                  +e+L++cQ ++GG++g p+ e++++yt++alaa all
   EPX72644.1 183 LEWLCKCQTYEGGLAGVPNAEAHGGYTFCALAAIALL 219
                  79*******************************9987 PP

  == domain 5  score: 17.7 bits;  conditional E-value: 2.5e-07
                  HHHHHHHHHHHHSH.TTS-BBSSTTSSBBHHHHHHHH CS
  Prenyltrans   2 dvekavefLlscQn.edGGwggrpgsesdtyytywal 37 
                  d+ ++v +L  +Q+ +  G++gr ++ +d++y++w+ 
   EPX72644.1 226 DIPSLVKWLVQRQDsALYGFSGRTNKLVDGCYSWWVG 262
                  667899999999999999*****************85 PP

  == domain 6  score: 23.9 bits;  conditional E-value: 2.9e-09
                  HHHHHHHHHHSH.TTS-BBSSTTSSBBHHHHHHHHHHHH CS
  Prenyltrans   4 ekavefLlscQn.edGGwggrpgsesdtyytywalaaLa 41 
                  +k+  ++l c++ ++GG+++ p +++d y+t+++l++L+
   EPX72644.1 288 RKLMKYILQCCQaKSGGLRDKPPKRPDQYHTCYCLLGLS 326
                  68889********************************98 PP

>> SQHop_cyclase_C  Squalene-hopene cyclase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   6.8e-07    0.0061     119     227 ..      36     148 ..      27     162 .. 0.81
   2 !    4.6   0.0    0.0016        14     146     221 ..     164     239 ..     155     244 .. 0.67

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 6.8e-07
                      -SGGGGS..TT-SSS-SSB--BHHHHHHHHHHHHHHT--TTSHHHHHHHHHHHHHS-TTS----SSBS.SHHHHHHHHHHHHHHTT--TTSHHH CS
  SQHop_cyclase_C 119 kellnki..PfadhealldpptadvtarvlellaqlgeeedsealkraveylkkeqepdGsWfGrWGv.nyiyGtwsvlsalaavgedleepvi 209
                      +++l+k+  P+  + ++ld + a +    l+ la +++  d ++ +ra++ l++ + ++G + G  G  +++  t++++ ++   + d++ ++i
       EPX72644.1  36 HNYLKKMlePLPSFFSVLDASKAWMVYWELNSLAVMNRL-DMSTKTRAISTLRQLRGKNGGFCGGNGQeEHVLSTYAAVLSICICDCDEAFALI 128
                      555555445777777888888888888888888888765.5567789*****************9997369*********************** PP

                      HHH..HHHHHTT--TTSSBB CS
  SQHop_cyclase_C 210 rka..vdWlksvqnedGGWG 227
                       ka  v+Wl s +n+dG + 
       EPX72644.1 129 DKAklVQWLYSLKNADGSFR 148
                      988779***********875 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.0016
                      HHHHHHHT--TTSHHHHHHHHHHHHHS-TTS----SSBSSHHHH.HHHHHHHHHHTT--TTSHHHHHHHHHHHTT-- CS
  SQHop_cyclase_C 146 lellaqlgeeedsealkraveylkkeqepdGsWfGrWGvnyiyG.twsvlsalaavgedleepvirkavdWlksvqn 221
                      + + + lg ++d++  + ++e+l k q  +G   G   ++   G t+++l a+a   +  ++  i   v+Wl+++q+
       EPX72644.1 164 VCVASLLGFSNDHDLFNGTLEWLCKCQTYEGGLAGVPNAEAHGGyTFCALAAIAL-LQGIQKLDIPSLVKWLVQRQD 239
                      3344556788888888888888888888888888877666554423444444433.345667778888888888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (377 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       436  (0.0243181); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.28s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 2499.20
//
Query:       EPX72645.1  [L=627]
Description: phosphoprotein phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.8e-14   54.7   4.3    1.8e-14   54.7   4.3    1.8  2  Metallophos  Calcineurin-like phosphoesterase


Domain annotation for each model (and alignments):
>> Metallophos  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.7   4.3   9.9e-19   1.8e-14       2     203 ..      38     262 ..      37     263 .. 0.62
   2 ?   -2.6   0.1      0.35   6.3e+03      99     162 ..     530     594 ..     512     619 .. 0.63

  Alignments for each domain:
  == domain 1  score: 54.7 bits;  conditional E-value: 9.9e-19
                  EEEEEESBTB...........TTCCTHHHHHHHHHHHHHHHTTESEEEEE.STSSSSS.......HHHHHHHHHHHHHHHH..TSEE.EEEC-TTS.. CS
  Metallophos   2 rilvigDlHl...........algggqlddllkllddllreekpdlvlla.GDlvdrg.......dlekellellaalvky..pipv.ylllGNHe.. 75 
                  +il+++D+H+           +   g + +++  +++l+re+++dl+++  GDl d++       ++        ++  ++  ++p+  l++GNHe  
   EPX72645.1  38 NILHTTDMHGwlaghahdkrySADLGEFVSFIIHMKRLAREKDVDLLVVDtGDLHDGTglsdltdPP-------GSWTNDLlrNVPYdLLVAGNHEly 128
                  79*************666444444444444444447779999******999******9555555433.......44444444445555********88 PP

                  ......CHHHHHHHHHHHHHHH...HHHHEHHHCEEETSEEEEEETTEEEEEEEESE.CEEE.......THHHHHHHHHHHSCHHHHCC.......HH CS
  Metallophos  76 ......gfeeellnkygylgif...sepwrsdaevfnnlplaslgsgslkvlllhGg.spel.......lvsldklgslnleleapepg.......de 149
                             + n+ ++++     s++  +d e+ +++p  +      k+++ +   + ++       + s    + ++                + 
   EPX72645.1 129 lsivmnD---TYHNFIPFWNGRylaSNVEIYDEETDSYYPFGD------KYVVFDTPhNVRIlslgfvgSFSGGCNEARV--------LsmetifqQP 209
                  8864432...555555555555555666666677778888888......4444443312222222223322223333333........255555669* PP

                  HHHHHHHHTTCSEEEEEESSESSCSSSCSCCHHHHHHH.HHHTT..ESEEEEESSSS CS
  Metallophos 150 wlkdlekrekadwvivlgHsplyrgsgylfgdealedl.lkkyg..vdlvisGHtHv 203
                  w+++ ++  + d ++v gH+p++     +  d+ l +l ++     +  v++GH+H 
   EPX72645.1 210 WWSEIRELQEIDLILVAGHIPVH---DSSELDQLLLELrKEF-PdtIIQVLGGHSHI 262
                  ***********************...3333333333442333.2456668******6 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.35
                  HCEEETSEEEEEETTEEEEEEEESECEEE..THHHHHHHHHHHSCHHHHCCHHHHHH..HHHHTTCSE CS
  Metallophos  99 aevfnnlplaslgsgslkvlllhGgspel..lvsldklgslnleleapepgdewlkd..lekrekadw 162
                  ++   ++p+  + sg  ++l+ + +  el  + +++k++ ++ e+ +p+ ++++ k   +  ++k dw
   EPX72645.1 530 GDDTIHIPIPHYDSG--NYLCSKVN-VELdsDRHPEKIDLVTTEFVIPRLNYILNKLagKPLFSKEDW 594
                  555556777777777..77777766.222344566666666666666666533333333444444555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (627 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       415  (0.0231469); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 4202.55
//
Query:       EPX72646.1  [L=664]
Description: CorA family magnesium ion transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.7e-49  167.3   0.1    7.3e-49  166.6   0.1    1.3  1  CorA      CorA-like Mg2+ transporter protein


Domain annotation for each model (and alignments):
>> CorA  CorA-like Mg2+ transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.6   0.1   4.1e-53   7.3e-49       5     291 ..     353     659 ..     349     660 .. 0.92

  Alignments for each domain:
  == domain 1  score: 166.6 bits;  conditional E-value: 4.1e-53
        CorA   5 vWldlsspteeeleeLaeelgldelaledlldseerprvedyddylllvlpsveldkseeeeeev.plsillgdnflitvrreplealdevikrlk.de 101
                  Wld+ssp+eee++ La+++g+++l+ ed++  e r +ve +  y +++++s+++  s+ e+    ++ +++ ++ ++t++ +p++   +v++r++  +
  EPX72646.1 353 WWLDVSSPKEEEIRILAKTFGIHPLTVEDITMAEDREKVELFRSYYFVTFRSFNQLPSGPEYLKPlNFYLVVFRDGILTFHMNPTPHPANVRRRIRqLN 451
                 6*********************************************************99987776777777************************877 PP

        CorA 102 ggkpkspgellyrlldeivdrlfellekleeeldeledel.........edstkkeilrelaqlrrrlvklrralapnrevlkrlla.kaddkll..dd 188
                 g  + ++ ++ y+lld  +d +++ +ek+e+e+d +++ +         e + ++++l+++ + r+ +  l r la++ +v+  l + +++ +++    
  EPX72646.1 452 GYLTINADWIAYALLDDTTDAFAPFIEKIEDEVDTIDEIIlgihhehvlEVKPQESMLKRVGECRKLIMSLLRLLANKADVVRGLSKrCNESWQVapRG 550
                 78899*****************************************************************************66666644444431145 PP

        CorA 189 edkeylrdlldelerllemlealrerleslqdtyssllser.......lNrvmkvLTvltaiflPlTlitGiyGmNfkglPelewsygypfvlllglma 280
                 e ++yl d++d++  +++ l+++ + l++ +++y +++s +       +N+v+ +LT+l +i++Pl l+tG++GmN++  P+++ +   +f ++lg+ +
  EPX72646.1 551 EIALYLGDVQDHIVTMVQNLNHYEKILSRSHSNYLAQISINmtlvsneTNEVLSRLTILGTILIPLNLVTGLWGMNVQ-VPGQDVPGLQWFFGILGSLM 648
                 67889*****************************99999999999999******************************.**999999999999999999 PP

        CorA 281 llailllfwfk 291
                 l+a++++++ k
  EPX72646.1 649 LFAVFSVLLCK 659
                 99999988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (664 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       925  (0.0515924); expected 358.6 (0.02)
Passed bias filter:                      594  (0.0331307); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.26s 00:00:00.91 Elapsed: 00:00:00.42
# Mc/sec: 4728.79
//
Query:       EPX72647.1  [L=240]
Description: 14-3-3 family protein Rad25 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-96  321.5   0.5    2.9e-96  321.2   0.5    1.0  1  14-3-3    14-3-3 protein
  ------ inclusion threshold ------
      0.069   13.2   0.1       0.13   12.3   0.1    1.4  1  FlaF      Flagellar protein FlaF


Domain annotation for each model (and alignments):
>> 14-3-3  14-3-3 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  321.2   0.5  3.3e-100   2.9e-96      18     222 .]       1     206 [.       1     206 [. 0.99

  Alignments for each domain:
  == domain 1  score: 321.2 bits;  conditional E-value: 3.3e-100
                 HCHHHHCSS---HCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCTCC.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHCH.-SHHHHHHHHHHH CS
      14-3-3  18 mkkvvelkeeLskeernlLsvayKnvvgarRaswrvlssieqkeeske.ekkvelikeyrekiekeLkeiceevlelldktlipkatseeskvfylkmk 115
                 mkkv+ l+e+L++eernlLsvayKn++garRaswr++ssieqkees++ +k+v likeyr+kie+eL++ic++vle+l+k+lip a + eskvfy+kmk
  EPX72647.1   1 MKKVAGLDEKLTVEERNLLSVAYKNIIGARRASWRIISSIEQKEESRGnTKQVGLIKEYRKKIEEELADICKDVLEVLEKHLIPVAGTGESKVFYYKMK 99 
                 9*********************************************99899999*****************************989************* PP

                 HHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHTTTGCC-HHHHHHHHHHHHHHHCTT--HHHHHHHHHHHHHCCHCCCCCS.TTTHHHHHHHHHHH CS
      14-3-3 116 gDyyRYlaEfaegeekkeaaekakeaYeeAleiakkelqpthpirLglaLNySVflyeilnspekAcelakkafdeaiaeldelseesykdstlilqlL 214
                 gDyyRYlaEfa ge+ k+aa+++ eaY++A++ia +el+pt+p+rLglaLN+SVf+yeil+sp++Ac+lak+afdeai+eld+lseesykdstli+qlL
  EPX72647.1 100 GDYYRYLAEFAVGETCKQAADNSLEAYKSASDIAVAELPPTDPMRLGLALNFSVFYYEILDSPDRACHLAKQAFDEAISELDSLSEESYKDSTLIMQLL 198
                 *************************************************************************************************** PP

                 HHHHHHHC CS
      14-3-3 215 rdnltlWt 222
                 rdnltlWt
  EPX72647.1 199 RDNLTLWT 206
                 *******8 PP

>> FlaF  Flagellar protein FlaF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   1.4e-05      0.13       5      73 ..     155     224 ..     152     227 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.4e-05
        FlaF   5 YaeaaestasprelEaealtraaakLkaaeeagkeseeelaeAlkfnrrlWtilae.dlaspenplpeel 73 
                 Y e+ +s + + +l ++a+++a+++L + +e++ ++++ +++ l++n  lWt  ae + +s+++p p++l
  EPX72647.1 155 YYEILDSPDRACHLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDAEyNNSSKDEPAPTSL 224
                 7777788888888999***************9999987777***********877623445667777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       843  (0.0470188); expected 358.6 (0.02)
Passed bias filter:                      568  (0.0316805); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.30s 00:00:00.80 Elapsed: 00:00:00.48
# Mc/sec: 1494.68
//
Query:       EPX72648.1  [L=907]
Description: ATP-dependent DNA helicase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      5e-68  229.4   0.8      8e-68  228.7   0.8    1.3  1  SNF2_N        SNF2 family N-terminal domain
    3.4e-15   56.4   1.8    3.4e-14   53.1   0.1    2.8  2  Helicase_C    Helicase conserved C-terminal domain
    2.3e-08   33.8   3.6    4.3e-08   32.9   3.6    1.5  1  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
    1.2e-07   31.9   0.0    2.6e-07   30.8   0.0    1.5  1  ResIII        Type III restriction enzyme, res subunit
    7.7e-06   25.8   5.1    1.6e-05   24.8   5.1    1.5  1  zf-RING_5     zinc-RING finger domain
    8.7e-06   24.8   0.0    1.5e-05   24.0   0.0    1.3  1  AAA_34        P-loop containing NTP hydrolase pore-1
    1.8e-05   24.5   8.5    5.6e-05   22.9   8.5    1.9  1  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
    2.2e-05   24.7   6.9    6.4e-05   23.2   6.9    1.9  1  zf-RING_2     Ring finger domain
    0.00038   20.3   6.9    0.00081   19.2   6.9    1.6  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
    0.00045   20.2   7.7     0.0015   18.5   7.7    2.0  1  zf-RING_UBOX  RING-type zinc-finger
    0.00069   19.4   5.9     0.0019   18.0   5.9    1.8  1  Prok-RING_4   Prokaryotic RING finger family 4
     0.0021   18.2   0.7     0.0021   18.2   0.7    2.4  2  zf-CRD        Cysteine rich domain with multizinc binding reg
     0.0084   15.9   0.1      0.056   13.2   0.1    2.3  1  DEAD          DEAD/DEAH box helicase
  ------ inclusion threshold ------
      0.016   15.3   2.7      0.044   13.9   2.7    1.7  1  zf-RING_10    zinc RING finger of MSL2
      0.059   13.3   6.1      0.019   14.9   2.5    2.1  1  Baculo_IE-1   Baculovirus immediate-early protein (IE-0)
      0.066   13.0   3.1       0.16   11.8   3.1    1.7  1  zf-RING_4     RING/Ubox like zinc-binding domain
       0.13   12.5   8.8       0.38   11.0   8.8    1.9  1  zf-C3HC4_4    zinc finger of C3HC4-type, RING


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  228.7   0.8   7.6e-71     8e-68      47     349 ..     271     573 ..     235     574 .. 0.86

  Alignments for each domain:
  == domain 1  score: 228.7 bits;  conditional E-value: 7.6e-71
                 ..HHHHHTT--EEE---TTS--HHHHHHHHH...HHTTTS---.......S-EEEE--HHHHHHHHHHHHHH-TTS.-EEE--SSHHHH---------- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  47 esaeakqsvrGGiLaDemGLGKTvqvlalilaqrakeekdkekkrkdtlagptLivvPaslldqWeneierhvsss.alrvlvyggqkkmkkkntkvap 144
                 +s+  +++ +GG+LaD+mGLGKTvq++al+l +r+   ++k            Li+vP +ll qW +e+   v+ss +  v++++g+      +++   
  EPX72648.1 271 QSM-EQSPKHGGLLADDMGLGKTVQTIALLLSHRSVDSSRK----------SNLIIVPVALLSQWASELSLKVHSSkHFSVYIHHGSA-----KKNYTG 353
                 444.467789*********************7776555544..........57*****************999876267889999874.....446889 PP

                 -------EEEE-HHHHHHHT....................TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxx..............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 145 klladydvvittYdvlsreaelq..............kkrsvlkqvewkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledlygLlkf 229
                 ++la++dvv+ttY++ls+e   +                ++++ +  w rvvlDE+ht++n +++aa+a+ +L++ +rw+ltGTP+qn++ +ly+L+kf
  EPX72648.1 354 EQLAQFDVVLTTYSTLSQELRQKelflqqardgqlvsPPPTPFLDTPWYRVVLDEAHTIRNRNTQAANACFQLDSIYRWCLTGTPLQNNVDELYSLIKF 452
                 *****************9985559***********99899*********************************************************** PP

                 H-TTTT--HHHHHHHTHHHHH....HHHHHHHHHHHTT-STTEE---GGGT..--...S---EEEEEEEEE--HHHHHHHH.................. CS
                 xxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxx..xx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 230 Lreepfgekqtfdkllqrpie....aqaekgrsrLlqllqrlmlrrakkdv..ek...nlPpkteeiiflklskverksYnrllevlrkkalakllkrs 319
                 Lr++p++ + +f k ++rp +       ++ ++rL+ ll+ l+lrr+k+    +k   +lP+k++++i ++++ +er +Y ++++++    ++ +l rs
  EPX72648.1 453 LRVKPYSVWSMFVKDFSRPLRsyrqDIVKAAMQRLRALLSALILRRTKNTHinDKrivELPEKSVQVIPVSFTLEERCIYAEQMNQAQSLLANYVLDRS 551
                 *********************776666677889***************98778443557**********************777666666555555553 PP

                 ..HHHHHH-HHH-HHHHHHHHHHHHH---X CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 320 eaalkssskskekilelllelrqacnhpql 349
                             ++l +ll+lrq c+hp+l
  EPX72648.1 552 SSY--------GNVLVSLLRLRQLCCHPWL 573
                 222........569**************98 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0       0.4   4.2e+02      34      62 ..     332     359 ..     294     371 .. 0.71
   2 !   53.1   0.1   3.2e-17   3.4e-14       5     111 .]     742     850 ..     735     850 .. 0.88

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.4
                 HHHHHTTSTEEEESTTSTHHHHHHHHHHH CS
  Helicase_C  34 lllekkgikvavlhgelpqnereeileqf 62 
                 + +++k+++v ++hg+ ++n   e l+qf
  EPX72648.1 332 V-HSSKHFSVYIHHGSAKKNYTGEQLAQF 359
                 2.345589******************999 PP

  == domain 2  score: 53.1 bits;  conditional E-value: 3.2e-17
                 HHHHHHHHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH.TTSSS.EEEESGGGTSSSTSTTESEEEESSSSSSHHHHH CS
  Helicase_C   5 allellkleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfn.kgesd.vLiatdvaerGidipkvnlVinfdlprnvtsyi 101
                  +++ +  +  ++kil+++++ + l+ v+ +l++++++ ++++g++++ +r++++++f  + ++  +Li+ + ++ G++++ +n+Vi  d+ +n++   
  EPX72648.1 742 DIIKSVMAKGTQDKILVYSQFSQYLDIVSHMLRTESVNHVRYDGSMSSIQRDHSIQEFThDLNVSvMLISLKCGSIGLNLTVANHVILQDPFYNPSLED 840
                 33333358899************999989999999***********************8544455699******************************* PP

                 HHHTTSSSTT CS
  Helicase_C 102 qriGRtgRag 111
                 q+i+R++R+g
  EPX72648.1 841 QAIDRVYRIG 850
                 ********97 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.9   3.6   4.1e-11   4.3e-08       2      46 ..     611     662 ..     610     665 .. 0.86

  Alignments for each domain:
  == domain 1  score: 32.9 bits;  conditional E-value: 4.1e-11
                 GSB-TTTSSSBS-.EEETTEEEEEE-HHHHHHHHH.......TT-B-TTT--B CS
  zf-C3HC4_3   2 deeCviClerprn.vvllpCgHlvlCeeCaekllk.......rkkkCpiCrrp 46 
                 d +C++Cl++  + ++++pCgH  +C+eC+  ll         ++kCp+Cr  
  EPX72648.1 611 DFICSVCLDSTLSpIFIIPCGHY-TCQECMGMLLGhsgnqsqLDPKCPMCRGT 662
                 678******865527788*****.*********988999998899******75 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   0.0   2.5e-10   2.6e-07      15     169 ..     269     438 ..     259     440 .. 0.73

  Alignments for each domain:
  == domain 1  score: 30.8 bits;  conditional E-value: 2.5e-10
                 HT......TTSEEEEEESTTSTHHHHHHHHHHHH-S......-EEEEESSHHHHHHHHHHGGGGTGG............GEEEESSS-B--.......- CS
      ResIII  15 lleklkskrdkrglikmaTGtGKTlvaaklierllkkgkee.kflflvprkslleqtleefkkflseayke........igkkvsgdkkkakekdstnk 104
                 +++++++  ++ gl++   G GKT+  ++l  + ++  + +   l++vp  +ll+q+ +e++   ++ +++        ++k+++g++  +        
  EPX72648.1 269 WMQSMEQSPKHGGLLADDMGLGKTVQTIALLLSHRSVDSSRkSNLIIVP-VALLSQWASELSLKVHSSKHFsvyihhgsAKKNYTGEQLAQ-------F 359
                 56677767777899999*******9886666665555544415666666.799*****999998888888856655555555555555555.......* PP

                 SEEEEEHHHHHHTH........HHHTTT-S.............EEEEETGGGTTS.TTTHHHHHT-..--SEEEEEESS- CS
      ResIII 105 kilvttiqsldadseeeeeeseellrdrfd.............viiiDEaHrlgakkswreilekf..keavllglTATp 169
                 ++++tt+++l+++++++e   +++++++                ++ DEaH ++   + ++++ +f  ++ ++  lT+Tp
  EPX72648.1 360 DVVLTTYSTLSQELRQKELFLQQARDGQLVsppptpfldtpwyRVVLDEAHTIRN-RNTQAANACFqlDSIYRWCLTGTP 438
                 **************6554444444444444999999******99*********99.555555444422669999999998 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   5.1   1.5e-08   1.6e-05       2      43 ..     614     660 ..     613     661 .. 0.96

  Alignments for each domain:
  == domain 1  score: 24.8 bits;  conditional E-value: 1.5e-08
   zf-RING_5   2 CnkCfeklskeekfyltsCgHifCekClkkll.......ekeavCpiCr 43 
                 C++C +++   +++++ +CgH+ C++C+  ll       + + +Cp+Cr
  EPX72648.1 614 CSVCLDST--LSPIFIIPCGHYTCQECMGMLLghsgnqsQLDPKCPMCR 660
                 9******9..99************************9999999*****8 PP

>> AAA_34  P-loop containing NTP hydrolase pore-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.0   1.5e-08   1.5e-05      45     191 ..     261     419 ..     231     443 .. 0.74

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 1.5e-08
      AAA_34  45 vyacqrhe..ellpdgkRaGfllGDgaGvGkgrq.iagiilenllqgrkkavwvsvsedLkeDaerDlk.digaseievvalnklkegkkikeseelke 139
                 ++ +q h+  + ++++ ++G ll D++G+Gk+ q ia ++ ++ ++  +k+  + v  +L+   + +l+  +  s++  v +++ +++k+ + ++  + 
  EPX72648.1 261 IHQVQGHHwmQSMEQSPKHGGLLADDMGLGKTVQtIALLLSHRSVDSSRKSNLIIVPVALLSQWASELSlKVHSSKHFSVYIHHGSAKKNYTGEQLAQF 359
                 555555553367778889*************96526777777777777777777777777766666664255555444444555555556656666677 PP

      AAA_34 140 GvlFvtYstliseskkkk....ksrleqlveWlg.edfdG...vivfDEchkaknlakse 191
                  v+++tYstl +e ++k+    ++r  qlv+      +d     +v+DE+h+++n ++++
  EPX72648.1 360 DVVLTTYSTLSQELRQKElflqQARDGQLVSPPPtPFLDTpwyRVVLDEAHTIRNRNTQA 419
                 8**************988888899******99885556766668**********998765 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   8.5   5.3e-08   5.6e-05       2      40 .]     614     659 ..     613     659 .. 0.80

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 5.3e-08
  zf-C3HC4_2   2 CpiCldmlkdpsvvtpCgHvfCqkCilrsLeek......n.eCPlC 40 
                 C +Cld+   p+ ++pCgH +Cq+C+   L ++      + +CP+C
  EPX72648.1 614 CSVCLDSTLSPIFIIPCGHYTCQECMGMLLGHSgnqsqlDpKCPMC 659
                 **************************99887653333332368888 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   6.9   6.1e-08   6.4e-05       3      44 .]     614     660 ..     612     660 .. 0.85

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 6.1e-08
   zf-RING_2   3 CpICleelssadsvlllpCgHvfhreClerwlrssst.......CPlCr 44 
                 C++Cl++  s   + + pCgH  ++eC+  +l +s +       CP+Cr
  EPX72648.1 614 CSVCLDSTLS--PIFIIPCGHYTCQECMGMLLGHSGNqsqldpkCPMCR 660
                 *****88864..444558**********8888888888999*******9 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   6.9   7.7e-07   0.00081       1      41 []     614     659 ..     614     659 .. 0.88

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 7.7e-07
                 -TTT-S--SS-E.E-TTS--B-CHHHHHHHHC.....TSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepnelleCkHsfCskCirkilks.....rkkvkCPlC 41 
                 C++Cl+    p  +++C+H  C++C+  +l       +   kCP+C
  EPX72648.1 614 CSVCLDSTLSPIFIIPCGHYTCQECMGMLLGHsgnqsQLDPKCPMC 659
                 ******9999999**************999987765444556**** PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   7.7   1.4e-06    0.0015       1      39 []     614     657 ..     614     663 .. 0.81

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 1.4e-06
  zf-RING_UBOX   1 CpIClelftdPlvl.pCGHtFCreCl..w..elskslegafkCP 39 
                   C++Cl++   P++  pCGH  C+eC       + ++++   kCP
    EPX72648.1 614 CSVCLDSTLSPIFIiPCGHYTCQECMgmLlgHSGNQSQLDPKCP 657
                   *****9888993444***********751567777777777887 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   5.9   1.8e-06    0.0019       1      42 [.     614     665 ..     613     669 .. 0.74

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 1.8e-06
  Prok-RING_4   1 CvlCgeqekkai.lepCgHlvCkeCfdsk.....dls....sCPlCqrrisk 42 
                  C +C  +   +i ++pCgH  C+eC         + s     CP+C+  ++k
   EPX72648.1 614 CSVCLDSTLSPIfIIPCGHYTCQECMGMLlghsgNQSqldpKCPMCRGTFAK 665
                  999999876554289**********865553334333699******987765 PP

>> zf-CRD  Cysteine rich domain with multizinc binding regions
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.7   1.9e-06    0.0021      20      99 ..     632     728 ..     629     776 .. 0.67
   2 ?   -1.3   0.1         2   2.1e+03      78     116 ..     857     895 ..     843     903 .. 0.78

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 1.9e-06
      zf-CRD  20 HltCtaCgqlmPkr..peagvpqqCelCkrpfCnlYw.kgcsraecsgl.........Lkpi.....eekliekipeevlegneveqkilkdylaek 99 
                 H+tC++C +++     ++++ + +C +C+ +f +    ++++ ++ +g          L++      ++++ ++i + ++++n++eq++lk++ ++ 
  EPX72648.1 632 HYTCQECMGMLLGHsgNQSQLDPKCPMCRGTFAKDHLvSEITIQAVFGSlnsisqlrsLQKQneiaeKQNEEHRIDKVLVWNNRYEQDFLKKFGKRL 728
                 **********99885545566689********98887533333333333344455444552234466677777888999999999999998876543 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 2
      zf-CRD  78 peevlegneveqkilkdylaekgltlqdvlkevlekldk 116
                   +++ +n+ve ki+    +++ l  +++ ++ ++ l +
  EPX72648.1 857 VYRLITENTVEEKIVAVQEKKRDLIQNTMGNDRIQSLTS 895
                 557889999**9999999999999999988877777665 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.1   5.3e-05     0.056      20     136 ..     284     415 ..     270     431 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 5.3e-05
                 EESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTT.STSEEEEEETTSSHHHHHHHHHTTCSEEEEEHHHHHHHH..... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..... RF
        DEAD  20 aaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkky.idlrvlliiggvaardqlskldngvdivvgtpgrlddll..... 112
                 a + G GKT   +  +l++ +   +++++  li++P   L  q +++l+   +   + +v    g+ +++   ++l ++ d+v++t + l + l     
  EPX72648.1 284 ADDMGLGKTVQTIALLLSHRS--VDSSRKSNLIIVPVA-LLSQWASELSLKVHSsKHFSVYIHHGSAKKNYTGEQL-AQFDVVLTTYSTLSQELrqkel 378
                 56779****998888886664..47888899*****86.5566777775555541447777677788888999999.9**************9955555 PP

                 .....HCTSSH.......CTTEEE.EEEETHHHHHHT CS
                 .....xxxxxx.......xxxxxx.xxxxxxxxxxxx RF
        DEAD 113 .....stgkln.......lsqvrf.lVlDEadrlldq 136
                      ++g+l        l+   + +VlDEa+++ + 
  EPX72648.1 379 flqqaRDGQLVsppptpfLDTPWYrVVLDEAHTIRNR 415
                 5554433333345555544444346777777777665 PP

>> zf-RING_10  zinc RING finger of MSL2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   2.7   4.2e-05     0.044       3      45 ..     614     661 ..     612     675 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 4.2e-05
  zf-RING_10   3 CvvCckLLvdPlepkekeCqHyvCrlCvg.......kkkklkpsCsqCkd 45 
                 C+vC      P+      C+Hy C+ C+g       ++ +l p+C++C+ 
  EPX72648.1 614 CSVCLDSTLSPIFI--IPCGHYTCQECMGmllghsgNQSQLDPKCPMCRG 661
                 77776666666654..67*********853333333789*********93 PP

>> Baculo_IE-1  Baculovirus immediate-early protein (IE-0)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   2.5   1.8e-05     0.019      81     136 ..     612     668 ..     560     673 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.8e-05
  Baculo_IE-1  81 yqcnicedtsaeerflkPneccGykicnlcyanlwkfst....vyPvcPvcktsfksssk 136
                  + c++c d++    f+ P   cG+  c+ c   l  +s     + P cP+c+ +f +++ 
   EPX72648.1 612 FICSVCLDSTLSPIFIIP---CGHYTCQECMGMLLGHSGnqsqLDPKCPMCRGTFAKDHL 668
                  67**************99...*************98864344499**********98765 PP

>> zf-RING_4  RING/Ubox like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   3.1   0.00016      0.16       3      47 ..     613     663 ..     612     664 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00016
   zf-RING_4   3 lCdeeldetdkdlkpCeCgyqiClfCyhrile......eeegrCPaCreeY 47 
                 +C  +ld t + ++  +Cg+  C+ C   +l       + + +CP Cr ++
  EPX72648.1 613 ICSVCLDSTLSPIFIIPCGHYTCQECMGMLLGhsgnqsQLDPKCPMCRGTF 663
                 689999999999***************999985554434499******876 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   8.8   0.00036      0.38       1      42 []     614     659 ..     614     659 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00036
  zf-C3HC4_4   1 CPiCldYLekPvs.leCGhsfClsCisslqkepdgeq...llCplC 42 
                 C +Cld    P+  ++CGh  C++C+  l  ++ +++     Cp+C
  EPX72648.1 614 CSVCLDSTLSPIFiIPCGHYTCQECMGMLLGHSGNQSqldPKCPMC 659
                 99*****999996379*********988766554433344789998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (907 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       867  (0.0483574); expected 358.6 (0.02)
Passed bias filter:                      452  (0.0252106); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.78u 0.29s 00:00:01.07 Elapsed: 00:00:00.49
# Mc/sec: 5512.91
//
Query:       EPX72649.1  [L=612]
Description: RNA-binding protein Csx1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.5e-37  127.3   0.0    4.3e-16   58.5   0.0    3.3  3  RRM_1        RNA recognition motif. (a.k.a. RRM, RBD, or RNP 
    4.6e-05   23.3   0.0     0.0022   17.9   0.0    2.9  3  Nup35_RRM_2  Nup53/35/40-type RNA recognition motif
     0.0021   17.7   0.0        1.4    8.5   0.0    3.1  3  RRM_5        RNA recognition motif. (a.k.a. RRM, RBD, or RNP 
     0.0072   16.4   0.0      0.026   14.5   0.0    1.9  2  RRM_3        RNA binding motif
     0.0073   16.4   0.1      0.022   14.9   0.0    1.9  2  RRM_7        RNA recognition motif
  ------ inclusion threshold ------
      0.086   13.1   0.0       0.19   12.0   0.0    1.5  1  Laminin_G_1  Laminin G domain
       0.09   12.8   0.0        0.2   11.7   0.0    1.5  1  TRAM         TRAM domain


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0     4e-08    0.0001       2      66 ..      81     148 ..      80     150 .. 0.84
   2 !   43.1   0.0   1.1e-14   2.7e-11       1      70 []     177     248 ..     177     248 .. 0.98
   3 !   58.5   0.0   1.7e-19   4.3e-16       1      69 [.     292     355 ..     292     356 .. 0.96

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 4e-08
                 EEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEE...EEEEEEESSHHHHHHHHHHHTTEEETT CS
       RRM_1   2 fVgnLppdvteeeLkelFskfGpiksiklvrdetgksk...gfafVeFeskedAekAlealngkklgg 66 
                 ++g+L + ++   L +l    G+ +++k++r +t +s+    ++fV+F+s+ +A+ Al+++n++ ++g
  EPX72649.1  81 WMGDLESWMDATFLQQLWASLGEPVNVKVMRSKTASSDaliSYCFVQFASSAAADFALRKYNNTVIPG 148
                 667777777777799999999**********97777763337**********************9987 PP

  == domain 2  score: 43.1 bits;  conditional E-value: 1.1e-14
                 EEEESETTTSSHHHHHHHHHT.TSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFsk.fGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrelk 70 
                 +fVg+L p++ +++L   F   + + +s+k++ d  tg s++++fV+F s+ + ++Al +++g+  +gr+l+
  EPX72649.1 177 IFVGDLLPTTQDSDLFLTFHTiYPSCTSAKIIVDpVTGLSRKYGFVRFSSEKEQQHALIHMQGYLCHGRPLR 248
                 8*****************************************************************999985 PP

  == domain 3  score: 58.5 bits;  conditional E-value: 1.7e-19
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 +fVg+L++d++e++L  +F++fG+i +ik+++      kg++fV+F++k +Ae+A++al+g  lg++ +
  EPX72649.1 292 VFVGGLSNDLSEKDLQLFFQPFGKILNIKIPYG-----KGCGFVQFNDKFAAEHAINALQGALLGSSHI 355
                 8*******************************7.....************************9998776 PP

>> Nup35_RRM_2  Nup53/35/40-type RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.19     5e+02      36      53 .]     121     138 ..     100     138 .. 0.85
   2 ?    0.1   0.0      0.31     8e+02      36      53 .]     217     234 ..     206     234 .. 0.85
   3 !   17.9   0.0   8.6e-07    0.0022       1      52 [.     289     341 ..     289     342 .. 0.95

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.19
  Nup35_RRM_2  36 vsvmyvkfesekdaekAL 53 
                   s+ +v+f+s+ +a+ AL
   EPX72649.1 121 ISYCFVQFASSAAADFAL 138
                  6899**********9997 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.31
  Nup35_RRM_2  36 vsvmyvkfesekdaekAL 53 
                  + + +v+f sek+ + AL
   EPX72649.1 217 RKYGFVRFSSEKEQQHAL 234
                  67899********99997 PP

  == domain 3  score: 17.9 bits;  conditional E-value: 8.6e-07
  Nup35_RRM_2   1 stwvaVsGydtelielVle.hFasfGeIvkhyvpkevsvmyvkfesekdaekA 52 
                  +t+v V G + +l e+ l+ +F+ fG+I ++ +p ++   +v+f ++ +ae A
   EPX72649.1 289 NTTVFVGGLSNDLSEKDLQlFFQPFGKILNIKIPYGKGCGFVQFNDKFAAEHA 341
                  699**********9988888*******************************98 PP

>> RRM_5  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.22   5.7e+02      52      90 ..     102     147 ..      68     156 .. 0.74
   2 !    4.4   0.0      0.01        26      66      99 ..     219     252 ..     215     264 .. 0.85
   3 !    8.5   0.0   0.00056       1.4      25      98 ..     288     359 ..     264     378 .. 0.80

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.22
       RRM_5  52 gnvervkflktkk.......etalvqmgdasaveravqHLnnaklf 90 
                 g+   vk++++k         + +vq +++ a++ a+   nn+ + 
  EPX72649.1 102 GEPVNVKVMRSKTassdaliSYCFVQFASSAAADFALRKYNNTVIP 147
                 5555688888876222222234678999999999999999998775 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.01
       RRM_5  66 talvqmgdasaveravqHLnnaklfgkrlevalS 99 
                 + +v  +++++ + a+ H+++   +g++l++ + 
  EPX72649.1 219 YGFVRFSSEKEQQHALIHMQGYLCHGRPLRISVA 252
                 567899999******************9888765 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.00056
       RRM_5  25 egsVllVyglepdkvnldklFnlfclYgnvervkflktkketalvqmgdasaveravqHLnnaklfgkrleval 98 
                  ++ ++V gl +d +  + l  +f  +g +  +k+    k+  +vq  d  a+e a++ L++a l  +++++a 
  EPX72649.1 288 LNTTVFVGGLSNDLSE-KDLQLFFQPFGKILNIKIPYG-KGCGFVQFNDKFAAEHAINALQGALLGSSHIRLAW 359
                 5777889999887665.557777999********9776.69*********************999666887765 PP

>> RRM_3  RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       1.6   4.2e+03      39      54 ..     219     234 ..     216     238 .. 0.80
   2 !   14.5   0.0     1e-05     0.026       4      60 ..     292     348 ..     290     389 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 1.6
                 EEEEEESSHHHHHHHH CS
       RRM_3  39 egevrFkedeeakkal 54 
                  g vrF +++e ++al
  EPX72649.1 219 YGFVRFSSEKEQQHAL 234
                 6889**9999988875 PP

  == domain 2  score: 14.5 bits;  conditional E-value: 1e-05
                 EEEEE-SSS--HHHHHHHCHCCS-ECEEEE-TTSSEEEEEESSHHHHHHHHHHHHHC CS
       RRM_3   4 lklsGlnkelsredikellsklgevayvdyekgdkegevrFkedeeakkalekatea 60 
                 +++ Gl+++ls +d++ +++ +g++  +    g+  g v+F+++ +a++a++++  a
  EPX72649.1 292 VFVGGLSNDLSEKDLQLFFQPFGKILNIKIPYGKGCGFVQFNDKFAAEHAINALQGA 348
                 77889**********************************************998766 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0         6   1.5e+04      45      60 ..     116     131 ..     104     139 .. 0.64
   2 !   14.9   0.0   8.7e-06     0.022       3      29 ..     291     317 ..     289     340 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 6
       RRM_7  45 nskaakgyvflvfede 60 
                 +s a  +y f+ f + 
  EPX72649.1 116 SSDALISYCFVQFASS 131
                 4556677888777665 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 8.7e-06
       RRM_7   3 kvFvGGlPiDiteeelkatfkefgkvl 29 
                  vFvGGl  D++e++l+  f+ fgk+l
  EPX72649.1 291 TVFVGGLSNDLSEKDLQLFFQPFGKIL 317
                 69**********************974 PP

>> Laminin_G_1  Laminin G domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   7.3e-05      0.19      29     106 ..     220     304 ..     218     314 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 7.3e-05
                  TEEEEEEESSS-EEEEEEEEETTSSS-EEEEEEEETTEEEEEETTSC-EEEES-TT-SS.......SEEECSEEEESSSS.GSTCC CS
  Laminin_G_1  29 GrlevsldlgsgaavvvsgqklndGkwhkvevernkrsgtlsvdgeervtgesplgatt.......tlnvnkklyvGGlp.dekvk 106
                  G +++s++ +++ a+++ +  l+ G+  +++v   k+++++  d       ++p+++ +         ++n+ ++vGGl+ d ++k
   EPX72649.1 220 GFVRFSSEKEQQHALIHMQGYLCHGRPLRISVAAPKSRASIAADSALG-IASNPTSNRQpnqdlcsVDPLNTTVFVGGLSnDLSEK 304
                  8999****************************************9888.444444444455566754468888******9443333 PP

>> TRAM  TRAM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   7.9e-05       0.2       9      58 ..      69     118 ..      67     121 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 7.9e-05
                 EEEEEEE-.TTSEEEEEET..TEEEEETT--T..TEEEEEEEEEE-SSEEE CS
        TRAM   9 eVlveglsksegegiGrtdn.gkvvfvpgdlpgIGdfVeVkItkvkrqyLr 58 
                 +V +e ++ +++ ++G ++  + ++f++   +++G+ V+Vk+ ++k ++  
  EPX72649.1  69 PVSFEPKN-NDTLWMGDLESwMDATFLQQLWASLGEPVNVKVMRSKTASSD 118
                 6999****.********************7555************999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (612 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       356  (0.0198561); expected 358.6 (0.02)
Passed bias filter:                      293  (0.0163422); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.72u 0.34s 00:00:01.06 Elapsed: 00:00:00.57
# Mc/sec: 3229.01
//
Query:       EPX72650.1  [L=355]
Description: hypothetical protein SOCG_00413 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (355 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1359  (0.075799); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.65u 0.33s 00:00:00.98 Elapsed: 00:00:00.55
# Mc/sec: 1935.39
//
Query:       EPX72651.1  [L=174]
Description: hypothetical protein SOCG_00414 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       613  (0.0341904); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.28s 00:00:00.70 Elapsed: 00:00:00.44
# Mc/sec: 1185.69
//
Query:       EPX72652.1  [L=1268]
Description: WD repeat protein Vps8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.1e-31  110.0   7.6    2.1e-31  109.0   2.5    2.7  2  Vps8         Golgi CORVET complex core vacuolar protein 8
  ------ inclusion threshold ------
       0.01   16.6   0.9        0.1   13.5   0.0    3.0  3  WD40         WD domain, G-beta repeat
      0.018   15.3   0.0       0.21   11.9   0.0    2.7  3  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
      0.057   13.7   0.0       0.11   12.8   0.0    1.4  1  DUF2778      Protein of unknown function (DUF2778)


Domain annotation for each model (and alignments):
>> Vps8  Golgi CORVET complex core vacuolar protein 8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.0   2.5   4.6e-35   2.1e-31       3     198 .]     575     756 ..     573     756 .. 0.94
   2 ?    2.6   0.2     0.018        83      56      94 ..    1032    1069 ..    1019    1103 .. 0.74

  Alignments for each domain:
  == domain 1  score: 109.0 bits;  conditional E-value: 4.6e-35
        Vps8   3 levLepyilsgklkslppevvkalvehysskgelerleelilhldpksLDldqvlklckehrLydaliYvwnkaldDYvtPlvellklirsaeeeeeek 101
                 +e+L ++il++++k  +pe+ k l+ +++++g+l+ +++li  ++ k LDld  +k+  +++L++ l+Yv   a++DY  Plv++l+l+ +     + +
  EPX72652.1 575 MEALLDLILQQRFKVPSPELQKLLLLYLEENGRLAYADKLIPAIEHKYLDLDFSTKFSSSKGLFNSLCYVSIYAFNDYSMPLVKFLNLLIE-----DIN 668
                 799**************************************************************************************99.....566 PP

        Vps8 102 eeeeeeeeeaykvfeYlsyiLtGraYPsgeeleeeeaskakseiyslLfsgksiewpkgsgklltkeeseeepafPylrlLLkfdaeeflsvLneaF 198
                 + ++  +   ++ f+Yl y LtG +YP  e+   +ea ++ +++++++fs + +           k +  e+ +fPylrl+Lk  a++f+++L++aF
  EPX72652.1 669 SPSKWINYCVKNGFQYLLYSLTGFKYPLCEPNGTDEAYTVTHTLLKIIFSANLLP---------FKINVLESGSFPYLRLFLKKRARSFFECLENAF 756
                 7788888888999************************************888543.........4567889999**********************9 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.018
        Vps8   56 vlklckehrLydaliYvwnkaldDYvtPlvellklirsa 94  
                   +++  +h+  +a iY++ + l+ Y   l ++lk +r+ 
  EPX72652.1 1032 LTEVFLRHNCLEASIYIY-RELEQYNHALSQVLKYVRTR 1069
                  677888999********7.5699***********99984 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.3      0.71   3.2e+03      14      34 ..      93     113 ..      85     115 .. 0.74
   2 ?   13.5   0.0   2.3e-05       0.1       6      38 .]     129     165 ..     124     165 .. 0.86
   3 ?   -2.4   0.0       2.5   1.1e+04      13      36 ..     301     329 ..     271     330 .. 0.54

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.71
                 EEEEEETTSSEEEEEETTSEE CS
        WD40  14 tslafspdgawlasGsdDgtv 34 
                 t+ +  ++g++la G+ +g v
  EPX72652.1  93 TGTCITHSGNLLAVGTSNGCV 113
                 44555999*****99658876 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 2.3e-05
                 EEESS.SS...EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   6 tltGH.ss...vtslafspdgawlasGsdDgtvriWd 38 
                 ++ G  ++   vt+la  p ++ l+ G+ Dgt+ +Wd
  EPX72652.1 129 EFPGSeNPlmpVTCLAIAPTHKVLCQGHADGTLFVWD 165
                 56777677888************98899********9 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 2.5
                 EEEEEEETTSSE......EEEEETTSEEEE CS
        WD40  13 vtslafspdgaw......lasGsdDgtvri 36 
                 v+s+ ++ +g+       ++ +  +++vr+
  EPX72652.1 301 VSSVVVPTSGNKsrarafFCVAY-NCHVRV 329
                 44443222222222333133333.777776 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.0    0.0041        18      30      69 ..      81     120 ..      62     129 .. 0.73
   2 ?   11.9   0.0   4.8e-05      0.21       8      69 ..     102     168 ..      95     181 .. 0.89
   3 ?   -1.5   0.0       0.7   3.1e+03      49      73 ..     196     220 ..     172     228 .. 0.75

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0041
  ANAPC4_WD40  30 wtleedkedsev.rsLaWkpdgklLavaysdgevrlldaes 69 
                   + +e+k+ds+v ++ +  ++g+lLav++s+g v + + +s
   EPX72652.1  81 EN-AESKPDSSVgTGTCITHSGNLLAVGTSNGCVIFNNLKS 120
                  33.46777777745889999************987766655 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 4.8e-05
  ANAPC4_WD40   8 DLiAlatedgellvfRlngqrvwtl.....eedkedsevrsLaWkpdgklLavaysdgevrlldaes 69 
                  +L+A++t++g ++ + l+ +  +tl      ++++   v++La  p  k+L+ +++dg++ + d  +
   EPX72652.1 102 NLLAVGTSNGCVIFNNLKSNTSFTLvpefpGSENPLMPVTCLAIAPTHKVLCQGHADGTLFVWDLTH 168
                  79***********************999998899999*********************998887665 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 0.7
  ANAPC4_WD40  49 dgklLavaysdgevrlldaesgkvv 73 
                  ++++L  a s g++ +++ ++  + 
   EPX72652.1 196 SDNVLLAANSSGKIFIHEFYNLLIN 220
                  6899999*******99999986555 PP

>> DUF2778  Protein of unknown function (DUF2778)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   2.4e-05      0.11      49      99 ..      66     119 ..      34     130 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2.4e-05
     DUF2778  49 krseW..FalvradrkiddeteiegvkRggfrlHpl.lgpsgeSeGCitlkens 99 
                  + +W  F +v+++ +  +++ ++ v+ g    H + l   g+S+GC+++++ +
  EPX72652.1  66 YWLKWgrFRRVSQQLENAESKPDSSVGTGTCITHSGnLLAVGTSNGCVIFNNLK 119
                 2556666999*************************988999*********9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1268 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       665  (0.0370907); expected 358.6 (0.02)
Passed bias filter:                      445  (0.0248201); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.83u 0.27s 00:00:01.10 Elapsed: 00:00:00.46
# Mc/sec: 8275.97
//
Query:       EPX72653.1  [L=510]
Description: fumerate reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      1e-73  248.8   0.0    1.2e-73  248.6   0.0    1.0  1  FAD_binding_2  FAD binding domain
    8.3e-08   32.2   0.4    0.00016   21.4   0.2    2.6  3  DAO            FAD dependent oxidoreductase
    6.6e-06   25.6   0.7    4.8e-05   22.7   0.5    2.3  2  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
    5.8e-05   23.2   0.5    0.00019   21.6   0.5    1.9  1  NAD_binding_8  NAD(P)-binding Rossmann-like domain
    0.00015   20.6   8.4     0.0032   16.2   1.3    2.5  3  HI0933_like    HI0933-like protein
    0.00031   20.1   0.5    0.00069   19.0   0.6    1.6  1  AlaDh_PNT_C    Alanine dehydrogenase/PNT, C-terminal domain
    0.00062   19.2   0.1    0.00094   18.6   0.1    1.3  1  FAD_oxidored   FAD dependent oxidoreductase
    0.00086   18.5   3.2     0.0048   16.0   0.1    2.8  3  GIDA           Glucose inhibited division protein A
     0.0059   15.9   0.4     0.0099   15.2   0.4    1.3  1  FAD_binding_3  FAD binding domain
     0.0067   15.7   1.5      0.046   13.0   0.2    2.2  2  Thi4           Thi4 family


Domain annotation for each model (and alignments):
>> FAD_binding_2  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  248.6   0.0   6.7e-77   1.2e-73       2     417 .]      37     477 ..      36     477 .. 0.93

  Alignments for each domain:
  == domain 1  score: 248.6 bits;  conditional E-value: 6.7e-77
                    EEEE--SHHHHHHHHHHHHTTT-EEEEESSSGGGSGGGG--S-EE-TT..SSGGSTC.CHHHHHHHHHHHHTTT-S-HHHHHHHHHTHHHHHHHHH CS
  FAD_binding_2   2 viViGsGlAGLaAAleaaeaGlkvavvekeqefggatawsqGgidavlspeqkkagikdspelhrtdtlkaldeladqplveafveaapeavdeLe 97 
                    +iViG+GlAGL+A+ ++ e G +v++++k  +fgg+++ +  gi+a++++ q ++++ ds+    +d + ++   ++++l ++++++++ avd+L+
     EPX72653.1  37 AIVIGGGLAGLSATNTILELGGNVLLLDKNTAFGGNSVKAASGINAAATQLQFDQNVPDSVNTFYHDSILSAKSKGNPELLRTLTSKSGSAVDWLT 132
                    69*********************************************************************************************9 PP

                    HT.T----BCCTSSB-EEE-TT-SSTEEEE-.STT-......HHHHHHHHHHHHHHTCT......EEEEESEEEEEEEECTT..EEEEEEEEETTT CS
  FAD_binding_2  98 el.gvpfsrtedgpvdvrelGglsatartlhdaadarretlvtghallarlvesarkag......vdfqerteadeLivedg..rvtGavvenpes 184
                    e  g+++++       ++ l g+s+  rt++  +++      + + l+++ +++ +k        +++  +t++++Li+++    v Ga+ e++++
     EPX72653.1 133 ERfGLQMNE-------LSLLAGHSQA-RTHR-GSHP----DYPFKPLAYVIADKTEKFSvahpdrLQIKKNTRVTRLITDSSnsTVIGAEYEDLNE 215
                    999999999.......**********.8888.4443....24888888888888877777778****************85556********6655 PP

                    TCEEEEEESEEEE-----GG...............GSSSBSSGTT-S-HHHHHHHCTTSSEES..TT-EEEEEEEET....TTTB...B--THHHH CS
  FAD_binding_2 185 grevrirakavvlatgGfgr.....allkellgaaaeaettnapavtGdglalalragaalnddrmeevqfhPtslvpirdgsgi...Litealrg 272
                    ++ ++++   vvlatgG+ +     +llk + ++a + +ttn p +tGdg++++ + g++  d  ++ vq+hPt++v+++d++ +   L  ealrg
     EPX72653.1 216 KT-RQSVYGPVVLATGGYAAdfsdeSLLKLHHPEALKLSTTNGPYCTGDGHKMVMSIGGNTVD--LDLVQIHPTGWVDPKDPTSMtkfLAAEALRG 308
                    55.4456679**************************************************999..******************************* PP

                    TT-EEE-TTSSBTHGGGS-HHHHHHHHH.HHHHTTTS.CCBEEEE-TT........................SSHHHHHHHSHHHHHHHHHCCT.. CS
  FAD_binding_2 273 eGgilvdkdGrrFmnelasrdvvsrailekeiaeggs.eanvyldash.......................gldaegleatleaineeaangldkd 344
                     G++l+ ++G+rF nel  rd v++ +++     +    an++ d+++                        + ++ le+t+  +n++ + + ++ 
     EPX72653.1 309 SGAVLLTDKGKRFCNELGYRDYVTAEMMKLNTPVQLViPANCVPDVANfvkfysfkglmrevdaeelskvlNCTSKDLENTFSLVNKASRGETKDV 404
                    ****************************88887777787888888888999999*************************************99999 PP

                    ....S-TTTSEEE........EEEEEEEES-EEEBETTSBESTTEEESSBTEEE-STCEESSSSTTS--TTHHH CS
  FAD_binding_2 345 fgrgidpadrpip.gpfyavkvvpaqhytmgGvetdengrvldadgqpipGLYAaGevaaggvhganrlgGnsl 417
                    fgr+   ++  +   +f+  +v p  hytmgGv+ d ++rv++++g+pi+GL+AaGe   gg+hg nrlgG+sl
     EPX72653.1 405 FGREQFGKQPFNIsDKFFIGQVEPVLHYTMGGVQADSQARVMSKEGNPIEGLFAAGEIV-GGLHGENRLGGSSL 477
                    99988887776667889999999999*********************************.************98 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.2     9e-08   0.00016       3      78 ..      38     160 ..      36     181 .. 0.68
   2 !    8.0   0.0     0.001       1.8     162     213 ..     186     244 ..     178     263 .. 0.64
   3 ?   -2.5   0.0       1.6   2.9e+03     144     164 ..     293     314 ..     278     345 .. 0.72

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 9e-08
                 EEECTSHHHHHHHHHHHHTT..EEEEESSSSTTSSGGGSSEEEEESSSSTHHSTH............................................ CS
         DAO   3 viiGGGiiGlstAyeLarrg..VtllekgdiagsgaSgrnsgllhsglrylpeas............................................ 55 
                 ++iGGG +Gls+     + g  V+ll+k+  +g g S +++  + ++   l+  +                                            
  EPX72653.1  38 IVIGGGLAGLSATNTILELGgnVLLLDKNTAFG-GNSVKAASGINAAATQLQFDQnvpdsvntfyhdsilsakskgnpellrtltsksgsavdwlterf 135
                 8************99998877********9999.99999999998877433322245566667777777777777777766666666666666666666 PP

                 ..HHHHHHHHH.HHHHHHHHHHHSST CS
         DAO  56 ..elarlslea.leelreleeelgid 78 
                   ++ +lsl a +   r + ++ ++d
  EPX72653.1 136 glQMNELSLLAgHSQARTHRGS-HPD 160
                 6666666664445555666655.444 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.001
                 EEEESECEEEEEEEE..TCEEEEE....EECTEEEEEEEE.....EEE--GGGHH.HH.HTTCTT CS
         DAO 162 eilegtevtgleeed..gkvwgve....rttpgendaada.....vVnaaGawsd.ll.gllkel 213
                 +i ++t+vt+l  ++    v g e    +++       ++     vV+a+G ++  ++ + l +l
  EPX72653.1 186 QIKKNTRVTRLITDSsnSTVIGAEyedlNEKT------RQsvygpVVLATGGYAAdFSdESLLKL 244
                 7999******8443233445555465442221......2223445********996665444334 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 1.6
                 EHHHHHHHHHHHHHHT.T-EEE CS
         DAO 144 dpakltaalaraaeal.Gveil 164
                 dp  +t++la++a ++ G+ +l
  EPX72653.1 293 DPTSMTKFLAAEALRGsGAVLL 314
                 5678889999997555144444 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.5   2.7e-08   4.8e-05       2     114 ..      36     236 ..      35     274 .. 0.73
   2 ?   -2.2   0.0       1.1   1.9e+03     256     278 ..     435     463 ..     430     472 .. 0.73

  Alignments for each domain:
  == domain 1  score: 22.7 bits;  conditional E-value: 2.7e-08
                  SEEEE--SHHHHHHHHHHHHHTS-EEEEETTHCHHHCSHHH.HCHHHHHHHHHHHHH......................................... CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxx......................................... RF
  Pyr_redox_2   2 dvvviGgGpAGlaaaltlaqagakvtlvelegtclnggcll.skallgvaedaeias......................................... 57 
                  + +viGgG AGl+a  t+ + g++v+l+ +++t ++g  +  ++ + ++a + +  +                                         
   EPX72653.1  36 QAIVIGGGLAGLSATNTILELGGNVLLL-DKNTAFGGNSVKaASGINAAATQLQFDQnvpdsvntfyhdsilsakskgnpellrtltsksgsavdwlt 132
                  569*************************.555544444444144555555555444499999***********9999999999999999999999999 PP

                  ....................................................HHHHCHHHHCCCCHCCTCEEEEESC..EEEEETEEEC..TCEEEEE CS
                  ....................................................xxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxx..xxxxxxx RF
  Pyr_redox_2  58 ....................................................evvkklnqgielllgeevvkidpgk..kkvklekkke..gdeekia 99 
                                                                              +i++ ++  v+++++++   +v   + ++  +++++  
   EPX72653.1 133 erfglqmnelsllaghsqarthrgshpdypfkplayviadktekfsvahpdrL-------QIKKNTR--VTRLITDSsnSTVIGAEYEDlnEKTRQSV 221
                  99999999999999988888888888888888888888877765555333221.......2333333..44444333114444443333778888999 PP

                  ESEEEE---EEE-BC CS
                  xxxxxxxxxxxxxxx RF
  Pyr_redox_2 100 ydklvlAtGssprdl 114
                  y+ +vlAtG+ + d+
   EPX72653.1 222 YGPVVLATGGYAADF 236
                  9********988887 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1.1
                  TEEE--TTSBE.....S.STTEEE-GGGC CS
                  xxxxxxxxxxx.....x.xxxxxxxxxxx RF
  Pyr_redox_2 256 ggivvdeflrt.....n.vpgiyaiGDva 278
                  gg++ d++ r+     n ++g++a+G ++
   EPX72653.1 435 GGVQADSQARVmskegNpIEGLFAAGEIV 463
                  67777777766666666699******988 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.5   1.1e-07   0.00019       1      35 [.      39      73 ..      39      90 .. 0.93

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 1.1e-07
                   EE--SHHHHHHHHHHHCCTEEEEEE-SSSSSSGGG CS
  NAD_binding_8  1 IvGaGlsGlvaAylLakagfdvlllekrdrlGGra 35
                   ++G+Gl+Gl+a  ++ + g +vlll+k++ +GG++
     EPX72653.1 39 VIGGGLAGLSATNTILELGGNVLLLDKNTAFGGNS 73
                   8********************************97 PP

>> HI0933_like  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   1.3   1.8e-06    0.0032       2      36 ..      36      70 ..      35      84 .. 0.93
   2 ?   -3.3   0.0       1.5   2.7e+03     126     165 ..     187     232 ..     183     234 .. 0.49
   3 !    8.4   0.4   0.00044      0.79     356     408 ..     433     489 ..     427     490 .. 0.77

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.8e-06
                 SEEEE--SHHHHHHHHHHHHTT--EEEE-SSSSS- CS
  HI0933_like  2 dviviGgGaAGlmaAisaakrgkrVlllekakklg 36
                 + iviGgG AGl a+ ++ + g +Vlll+k++++g
   EPX72653.1 36 QAIVIGGGLAGLSATNTILELGGNVLLLDKNTAFG 70
                 68*****************************9998 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.5
                  EE-S--EEEEECETTE.EEEEE.......TTEEEEESEEEE----S CS
  HI0933_like 126 lrletevksvekeedgkfrvktk......seeeleadklvlAtGGl 165
                  ++ +t+v+++ ++++++  + ++      ++++     +vlAtGG 
   EPX72653.1 187 IKKNTRVTRLITDSSNSTVIGAEyedlneKTRQSVYGPVVLATGGY 232
                  5566666666555555444443222232223333344578888886 PP

  == domain 3  score: 8.4 bits;  conditional E-value: 0.00044
                  EEEEE-GGGB-TTT-..BBTTSTTEEE-GGGB...SEEE-TTTHHHHHHHHHHHHHHH CS
  HI0933_like 356 TaGGVdlkevssktm..eskkvpgLffaGEvl...DvegvtGGynlqaAwasgyaAGk 408
                  T+GGV+ ++ +++ m  e + ++gLf aGE++     e  +GG  l a+ + g +AG+
   EPX72653.1 433 TMGGVQADS-QARVMskEGNPIEGLFAAGEIVgglHGENRLGGSSLLACVVFGRLAGQ 489
                  99***9986.6677711345699********7311445579***************98 PP

>> AlaDh_PNT_C  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.6   3.8e-07   0.00069      28      62 ..      34      68 ..      17     111 .. 0.87

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 3.8e-07
                 --EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHH CS
  AlaDh_PNT_C 28 pakvlviGgGvaGlqAiatakglgakVtvlDvrpa 62
                 + + +viGgG aGl+A +t  +lg +V +lD+++a
   EPX72653.1 34 NTQAIVIGGGLAGLSATNTILELGGNVLLLDKNTA 68
                 56789***************************987 PP

>> FAD_oxidored  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.1   5.2e-07   0.00094       3      44 ..      38      79 ..      36     121 .. 0.88

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 5.2e-07
  FAD_oxidored  3 vVvGGgpaGvaAAiaAaraGakvlLveergvlGGlltsglva 44
                  +V+GGg+aG+ A  +  + G +vlL++++   GG++ +++ +
    EPX72653.1 38 IVIGGGLAGLSATNTILELGGNVLLLDKNTAFGGNSVKAASG 79
                  8**********************************9988764 PP

>> GIDA  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.1   2.7e-06    0.0048       2      33 ..      37      68 ..      36     106 .. 0.82
   2 ?    0.2   0.0      0.17   3.1e+02      99     152 ..     191     233 ..     174     243 .. 0.62
   3 ?    0.6   0.1      0.13   2.3e+02     354     367 ..     452     465 ..     441     490 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 2.7e-06
                EEEE-SSHHHHHHHHHHHHTT--EEEEES-GG CS
        GIDA  2 viViGgGhAGceAAlaaarlGakvlLithkld 33
                 iViGgG+AG+ A  ++ +lG +vlL+ +++ 
  EPX72653.1 37 AIVIGGGLAGLSATNTILELGGNVLLLDKNTA 68
                69*************************66654 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.17
                 HHHHHHHHTSTTEEEEES-EEEEEECTTEEEEEEETTS-EEEEC.......EEEE--TT-B CS
        GIDA  99 kevteklenepnleiieeeveeliveekkvkgvvtedgetikak.......avviatGtfl 152
                 ++vt+ + ++ n ++i +e+e+l+                   k        vv+atG + 
  EPX72653.1 191 TRVTRLITDSSNSTVIGAEYEDLNE------------------KtrqsvygPVVLATGGYA 233
                 3455666666666666666666644..................112223337888888765 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.13
                 SSBTEEE-CGGGTB CS
        GIDA 354 kvkgLflAGqinGt 367
                  ++gLf+AG+i G 
  EPX72653.1 452 PIEGLFAAGEIVGG 465
                 689********996 PP

>> FAD_binding_3  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.4   5.5e-06    0.0099       2      40 ..      35      73 ..      34      88 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 5.5e-06
                   EEEEEE--SHHHHHHHHHHHHTTHHEEEEESSSSSCCSS CS
  FAD_binding_3  2 tdVlIVGaGpaGlmlallLseaGvrvvlvekrsttvvlp 40
                   t+ +++G+G+aGl++++   e G +v+l++k +    ++
     EPX72653.1 35 TQAIVIGGGLAGLSATNTILELGGNVLLLDKNTAFGGNS 73
                   899****************************98776665 PP

>> Thi4  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.2   2.6e-05     0.046       4      57 ..      21      73 ..      18      90 .. 0.85
   2 ?    1.4   0.1     0.085   1.5e+02     201     232 ..     442     473 ..     432     475 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2.6e-05
                HHHHHHHHHHHHTEEEEEEE--SHHHHHHHHHHHHCTTS-EEEEESSSS--TTT CS
        Thi4  4 iveryfedllkyaesDvvivGaGssGLtaayylakkpdlkvailersvspGGGa 57
                  ++  ++ ++  ++  +++G+G +GL+a+ ++ +  + +v++l+++ ++GG +
  EPX72653.1 21 AFKNKASMSITNNNTQAIVIGGGLAGLSATNTILEL-GGNVLLLDKNTAFGGNS 73
                55666667777788899*****************99.99*************76 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.085
                 HHHHHHHECEEETTEEE-THHHHHHHT-EB-- CS
        Thi4 201 edaivkktrevvpnlyvaGmevaevdganRmG 232
                  + +++k  + +++l++aG  v  ++g nR+G
  EPX72653.1 442 QARVMSKEGNPIEGLFAAGEIVGGLHGENRLG 473
                 456788888999*******************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (510 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       494  (0.0275531); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.62u 0.28s 00:00:00.90 Elapsed: 00:00:00.46
# Mc/sec: 3338.43
//
Query:       EPX72654.1  [L=354]
Description: HSP chaperone complex subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-10   40.3   3.6     0.0074   16.1   0.3    3.6  3  TPR_1       Tetratricopeptide repeat
    1.8e-07   31.6   1.8    7.4e-06   26.4   0.2    2.7  3  TPR_19      Tetratricopeptide repeat
    2.7e-07   30.2   3.5      0.095   12.9   0.2    3.7  3  TPR_2       Tetratricopeptide repeat
    9.1e-05   22.4   3.0       0.62   10.4   0.3    3.4  3  TPR_8       Tetratricopeptide repeat
    0.00035   19.4   0.4    0.00042   19.2   0.4    1.1  1  DUF3808     Protein of unknown function (DUF3808)
    0.00054   20.1   2.7      0.017   15.3   2.3    2.3  2  ANAPC3      Anaphase-promoting complex, cyclosome, subunit 3
    0.00062   20.4   0.2      0.071   13.8   0.2    2.5  2  TPR_16      Tetratricopeptide repeat
     0.0017   18.6   3.1          1    9.7   0.7    2.7  3  TPR_12      Tetratricopeptide repeat
     0.0056   16.6   0.6       0.87    9.8   0.0    3.0  3  TPR_7       Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.032   13.7   0.1      0.055   12.9   0.1    1.4  1  Coatomer_E  Coatomer epsilon subunit
      0.058   13.3   1.2         28    4.7   0.0    3.6  3  TPR_10      Tetratricopeptide repeat
      0.076   13.1   2.0       0.23   11.6   2.0    1.8  1  BRE1        BRE1 E3 ubiquitin ligase
       0.12   12.8   0.0       0.34   11.4   0.0    1.9  1  TPR_17      Tetratricopeptide repeat
       0.15   12.1   2.3        0.7   10.0   0.4    2.8  3  TPR_3       Tetratricopeptide repeat
       0.25   12.1   1.3         27    5.7   0.1    3.2  2  TPR_6       Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.3   6.2e-06    0.0074       8      28 ..      71      91 ..      71      92 .. 0.97
   2 !   15.1   0.0   1.3e-05     0.015       3      34 .]     104     135 ..     102     135 .. 0.95
   3 !    8.2   0.0    0.0019       2.3       2      23 ..     137     158 ..     136     160 .. 0.91

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 6.2e-06
                HHHHHHTT-HHHHHHHHHHHH CS
       TPR_1  8 GnayfklgkydeAleyyekAL 28
                Gn +f+ ++y eA eyy kAL
  EPX72654.1 71 GNECFSTKQYREAAEYYTKAL 91
                899*****************9 PP

  == domain 2  score: 15.1 bits;  conditional E-value: 1.3e-05
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   3 alynlGnayfklgkydeAleyyekALelnPnn 34 
                 ++ n++++ +  ++y + l +++++L+ +P++
  EPX72654.1 104 CYSNRAACNLIFENYRQVLNDCRQVLQRDPQH 135
                 79****************************86 PP

  == domain 3  score: 8.2 bits;  conditional E-value: 0.0019
                 HHHHHHHHHHHHTT-HHHHHHH CS
       TPR_1   2 kalynlGnayfklgkydeAley 23 
                 kal++ + a+  l++ydeA+ +
  EPX72654.1 137 KALFRSAKALVALKRYDEAESC 158
                 899999*************988 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1       9.2   1.1e+04      47      66 ..      34      53 ..      32      55 .. 0.71
   2 ?    3.6   0.0      0.08        95       5      21 ..      78      94 ..      75     102 .. 0.81
   3 !   26.4   0.2   6.2e-09   7.4e-06       6      64 ..     117     175 ..     113     179 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 9.2
      TPR_19 47 lLdalpeedpddaryasLlA 66
                 Ld++ ee   +a++ +L+A
  EPX72654.1 34 SLDDVEEEGEGNAQLEALKA 53
                67777777777788888877 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.08
      TPR_19  5 gdyaeAlalleqalqed 21
                ++y eA++++++al e+
  EPX72654.1 78 KQYREAAEYYTKALGEK 94
                69***********9886 PP

  == domain 3  score: 26.4 bits;  conditional E-value: 6.2e-09
      TPR_19   6 dyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpddaryasL 64 
                 +y + l+  +q+lq dp+++ a+ + A+al+al+++deAe ++    ++++ d+++ +L
  EPX72654.1 117 NYRQVLNDCRQVLQRDPQHSKALFRSAKALVALKRYDEAESCIRLFSASQRGDPAVEAL 175
                 6888888999********************************99999999989888776 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.2     8e-05     0.095       8      28 ..      71      91 ..      71      92 .. 0.94
   2 ?    5.2   0.0     0.022        27       4      34 .]     105     135 ..     103     135 .. 0.91
   3 !   10.8   0.1   0.00037      0.44       2      24 ..     137     159 ..     136     161 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 8e-05
       TPR_2  8 GlayyklgdyeeAleafekAl 28
                G+ ++  ++y eA+e++ kAl
  EPX72654.1 71 GNECFSTKQYREAAEYYTKAL 91
                788999**************8 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.022
       TPR_2   4 lynlGlayyklgdyeeAleafekAleldPnn 34 
                 + n++ + +   +y + l++++++l+ dP++
  EPX72654.1 105 YSNRAACNLIFENYRQVLNDCRQVLQRDPQH 135
                 789999999999*****************86 PP

  == domain 3  score: 10.8 bits;  conditional E-value: 0.00037
       TPR_2   2 ealynlGlayyklgdyeeAleaf 24 
                 +al++ ++a+ +l++y+eA+ + 
  EPX72654.1 137 KALFRSAKALVALKRYDEAESCI 159
                 79*****************9986 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.3   0.00052      0.62       8      28 ..      71      91 ..      69      94 .. 0.89
   2 ?   -1.4   0.0       3.3     4e+03      22      34 .]     123     135 ..     104     135 .. 0.78
   3 !   10.4   0.1   0.00053      0.63       2      25 ..     137     160 ..     136     164 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00052
                HHHHHHTT-HHHHHHHHHHHH CS
       TPR_8  8 gsiylklgdyeeAkeyyekal 28
                g+ ++++++y eA eyy kal
  EPX72654.1 71 GNECFSTKQYREAAEYYTKAL 91
                677899**************9 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 3.3
                 HHHHHHHHHHHH. CS
       TPR_8  22 eyyekaleldpdn 34 
                   ++++l+ dp++
  EPX72654.1 123 NDCRQVLQRDPQH 135
                 5689999999986 PP

  == domain 3  score: 10.4 bits;  conditional E-value: 0.00053
                 CHHHHHHHHHHHTT-HHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyye 25 
                 +a+++ ++++  l++y+eA+++++
  EPX72654.1 137 KALFRSAKALVALKRYDEAESCIR 160
                 799******************987 PP

>> DUF3808  Protein of unknown function (DUF3808)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.4   3.5e-07   0.00042     278     384 ..      73     197 ..      26     221 .. 0.79

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 3.5e-07
     DUF3808 278 ieslkgnldeAlelleeiieesqselkqvkhlclfelaltlvylheykeaaesfleLlkl.skwSkalYtYlaaacllelgre................ 359
                  ++ +++ +eA e++ +++  ++    +++  c+ ++a ++++  +y++ +++ +++l+   + Skal++  +a + l+ ++e                
  EPX72654.1  73 ECFSTKQYREAAEYYTKAL-GEKCGKPEIEIPCYSNRAACNLIFENYRQVLNDCRQVLQRdPQHSKALFRSAKALVALKRYDEaescirlfsasqrgdp 170
                 56778999**********9.9*********************************9877651689******************97777777766666666 PP

     DUF3808 360 ..ekkaeakekaeelfkevpkllqkka 384
                   e+ ++  ++  + f+++++ + ++a
  EPX72654.1 171 avEALNKDLKRKRDTFEKMETEKRRIA 197
                 654444444555555555555555555 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.3     0.052        62      34      56 ..      75      98 ..      52     123 .. 0.78
   2 !   15.3   2.3   1.4e-05     0.017      37      79 ..     116     159 ..      76     161 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.052
                HHTT-HHHHHHHHHCT.SHHHC-H CS
      ANAPC3 34 ylngqykrAyellrka.klnsksl 56
                ++++qy +A e++ ka ++++  +
  EPX72654.1 75 FSTKQYREAAEYYTKAlGEKCGKP 98
                899************988888877 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 1.4e-05
                 T-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH CS
      ANAPC3  37 gqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaL 79 
                 ++y + ++ +r+  + ++++ ++++  A++l++Lk+y+eA++++
  EPX72654.1 116 ENYRQVLNDCRQVlQRDPQHSKALFRSAKALVALKRYDEAESCI 159
                 6899999999999999************************9986 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0     0.068        81      10      25 ..      77      92 ..      69      98 .. 0.71
   2 !   13.8   0.2   5.9e-05     0.071      21      54 ..     126     156 ..     116     175 .. 0.88

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.068
      TPR_16 10 agdyddAaaaleaalk 25
                 ++y++Aa++++ al 
  EPX72654.1 77 TKQYREAAEYYTKALG 92
                4677777777777764 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 5.9e-05
      TPR_16  21 eaalkrdpssPdaaeAllllgdaalrqgrlaeAa 54 
                 +++l rd   P++  Al+ ++ a+ +++r++eA+
  EPX72654.1 126 RQVLQRD---PQHSKALFRSAKALVALKRYDEAE 156
                 7899999...***********************8 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       2.4   2.8e+03      24      52 ..      29      55 ..      28      56 .. 0.75
   2 !    9.7   0.7   0.00087         1      36      72 ..      56      91 ..      45      92 .. 0.79
   3 !    8.5   0.1    0.0021       2.5      23      66 ..     115     157 ..     104     160 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 2.4
      TPR_12 24 ellekaleiarrllGpdhpltattlrnLg 52
                 ++ ++l+ +++   ++  + +++l +L+
  EPX72654.1 29 PFFMQSLDDVEEE--GEGNAQLEALKALA 55
                5788999999988..44446888888887 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00087
      TPR_12 36 llGpdhpltattlrnLgrlyralgryeeAlelleeal 72
                + G  h ++a+  r  g  ++ +++y+eA e++++al
  EPX72654.1 56 YEGQPH-EVAQNFREHGNECFSTKQYREAAEYYTKAL 91
                334444.899999999*******************98 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.0021
      TPR_12  23 lellekaleiarrllGpdhpltattlrnLgrlyralgryeeAle 66 
                 +e+++++l+ +r++l    p+ + +l+  + ++ al+ry+eA++
  EPX72654.1 115 FENYRQVLNDCRQVLQ-RDPQHSKALFRSAKALVALKRYDEAES 157
                 6889999999999975.579999*******************96 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0   0.00073      0.87      13      27 ..      78      93 ..      74     101 .. 0.75
   2 ?   -1.9   0.0       3.9   4.7e+03      14      34 ..     117     135 ..     116     137 .. 0.78
   3 ?    3.8   0.0      0.06        72       1      23 [.     138     160 ..     138     171 .. 0.89

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00073
       TPR_7 13 GdyeeAielyeqsL.a 27
                 +y+eA+e+y+++L +
  EPX72654.1 78 KQYREAAEYYTKALgE 93
                58**********7644 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 3.9
       TPR_7  14 dyeeAielyeqsLaltkdped 34 
                 +y++ +  ++q  +l +dp++
  EPX72654.1 117 NYRQVLNDCRQ--VLQRDPQH 135
                 68888888999..88888876 PP

  == domain 3  score: 3.8 bits;  conditional E-value: 0.06
       TPR_7   1 aLlnLarlysrlGdyeeAielye 23 
                 aL++ a + ++l +y+eA+++ +
  EPX72654.1 138 ALFRSAKALVALKRYDEAESCIR 160
                 68888999***********9965 PP

>> Coatomer_E  Coatomer epsilon subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   4.6e-05     0.055     202     287 ..     103     191 ..      73     194 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 4.6e-05
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-..-HHHHHHHHHHHHHH-TT.-HHHHHHHHHHHHHHHHHH CS
  Coatomer_E 202 lllngkAvvslllgryeeAeslLkeaLdkdakdeetLiNlvvaaqhlgk..daevsernlsqlklshpe.hklvkdlnekeaeFdrlvl 287
                      +A+++l  ++y +  +  ++ L++d+++  +L  +  a   l +  +ae+  r +s ++   p    l+kdl+ k ++F+++ +
  EPX72654.1 103 PCYSNRAACNLIFENYRQVLNDCRQVLQRDPQHSKALFRSAKALVALKRydEAESCIRLFSASQRGDPAvEALNKDLKRKRDTFEKMET 191
                 456789*******************************87765544444311558888****999999972579************9865 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0       0.1   1.2e+02      15      29 ..      77      91 ..      71      94 .. 0.70
   2 ?    4.7   0.0     0.024        28      25      40 ..     118     133 ..     115     135 .. 0.85
   3 ?    2.5   0.1      0.12   1.5e+02      10      23 ..     144     157 ..     143     167 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.1
      TPR_10 15 rgrydeAealleeal 29
                +++y eA +++ +al
  EPX72654.1 77 TKQYREAAEYYTKAL 91
                567777777777766 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.024
      TPR_10  25 leealairrrllGpdH 40 
                 ++++l+ +r++l +d+
  EPX72654.1 118 YRQVLNDCRQVLQRDP 133
                 5************997 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.12
      TPR_10  10 nalrqrgrydeAea 23 
                  al +++rydeAe 
  EPX72654.1 144 KALVALKRYDEAES 157
                 578899******96 PP

>> BRE1  BRE1 E3 ubiquitin ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   2.0   0.00019      0.23      11      56 ..     171     216 ..     169     221 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00019
        BRE1  11 afeelseqlskkvkeltileekklrleaekakadqkyfaamrskda 56 
                 a e+l++ l+ k   ++ +e +k r+  ek  a +   +am+ ++ 
  EPX72654.1 171 AVEALNKDLKRKRDTFEKMETEKRRIAEEKVTAARVVIEAMKLRRI 216
                 6799**************************************8775 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00028      0.34       2      33 ..     125     156 ..     124     157 .. 0.94

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00028
      TPR_17   2 ylkaleldPnnadaynnLAelllknGdlmtAr 33 
                 ++++l++dP +++a++  A++l  ++++++A+
  EPX72654.1 125 CRQVLQRDPQHSKALFRSAKALVALKRYDEAE 156
                 6789**************************98 PP

>> TPR_3  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       1.8   2.1e+03       1      10 [.      48      57 ..      48      62 .. 0.80
   2 ?   10.0   0.4   0.00059       0.7       7      26 ..      70      87 ..      69      90 .. 0.90
   3 ?   -0.3   0.0      0.94   1.1e+03      14      21 ..     149     156 ..     139     158 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 1.8
                HHHHHHHHHH CS
       TPR_3  1 ldylysyAae 10
                l+ l+++A+e
  EPX72654.1 48 LEALKALAYE 57
                5789*****8 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00059
                HHHHHHHTT-HHHHHHH..H CS
       TPR_3  7 yAaefynkkkyqeArelfsY 26
                ++ e+++ k+y eA+e+  Y
  EPX72654.1 70 HGNECFSTKQYREAAEY--Y 87
                7789*************..5 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.94
                 TT-HHHHH CS
       TPR_3  14 kkkyqeAr 21 
                  k+y+eA+
  EPX72654.1 149 LKRYDEAE 156
                 69*****7 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.1     0.086     1e+02      13      27 ..      71      91 ..      49      93 .. 0.72
   2 ?    5.7   0.1     0.023        27       2      20 ..     138     156 ..     137     165 .. 0.90

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.086
                H......HHHHHHHHHHHHHH CS
       TPR_6 13 l......gdtdkAlealerli 27
                +      +++++A e++ + +
  EPX72654.1 71 GnecfstKQYREAAEYYTKAL 91
                15555548*********9875 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.023
                 HHHHHHHHHHHHHHHHHHH CS
       TPR_6   2 AlyklalsyrklgdtdkAl 20 
                 Al++ a+++ +l+++d+A 
  EPX72654.1 138 ALFRSAKALVALKRYDEAE 156
                 9**********99****95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (354 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       792  (0.0441742); expected 358.6 (0.02)
Passed bias filter:                      529  (0.0295053); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.51u 0.30s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 2348.73
//
Query:       EPX72655.1  [L=343]
Description: V-type ATPase V0 subunit D [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     3e-108  362.3   1.5   3.6e-108  362.0   1.5    1.0  1  vATP-synt_AC39  ATP synthase (C/AC39) subunit


Domain annotation for each model (and alignments):
>> vATP-synt_AC39  ATP synthase (C/AC39) subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  362.0   1.5    2e-112  3.6e-108       1     332 [.      13     335 ..      13     338 .. 0.96

  Alignments for each domain:
  == domain 1  score: 362.0 bits;  conditional E-value: 2e-112
                     HHHHHHHHGGGS--HHHHHHHTTS.-HHHHHHHHHTSGGGGG--.....SSSHHHHHHHHHHHHHHHTTTGGGGS-H.HHHHHHHHHHHHHHHHH CS
  vATP-synt_AC39   1 leArvramrsglLteedyenLlqcesledvkryLketdYgnfladelseplsrsdiekalreklarefnklreqapgpsrefldyllyrydidNv 95 
                     +eA+vr+++s lL+e++y nL qcesl+d++++L++tdYg fla+++  +l+ s i  ++++kl++ef+ +++qa++++ +f+d+++y y+idNv
      EPX72655.1  13 IEALVRGFKSALLSEHTYGNLSQCESLDDLRLQLSSTDYGGFLANQQ--KLTSSIIASKATDKLIDEFDMIKRQADEQLSKFMDFITYAYMIDNV 105
                     69*****************************************9998..59***************************55*************** PP

                     HHHHHHHHH.T--GGGS-..--.S..S.SS-HHHHHHHHHSSSHHHHHHHHH.T-HHHHHHHH.H.HCC...--SHHHHHHHHHHHHHHHHHHHH CS
  vATP-synt_AC39  96 klllrgklsgdldleeleeklhpl..g.elsaldldklieaksveelyeall.gtpyakylee.a.ldeleetgdleiienaLdkayledllkfc 184
                     +ll++g+ +g +d ++l+e++hpl  + +l+al++     a++ve+ly+++l ++p+a+y+++ +  d+l+e + +eii+n+L+kayled+++fc
      EPX72655.1 106 MLLVTGTANG-QDTHDLLERCHPLgwFeTLPALCV-----ATNVEDLYSVVLvESPLAPYFKDcLsADDLDE-KHIEIIRNTLYKAYLEDFYEFC 193
                     *********5.777************88*******.....***********************556666666.899******************* PP

                     HTSS-HH...HHHHHHHHHHHHHHHHHHHTTTSS......T...--SS-S--HHHHHHHHTT-G.....GG..GGSSTSSTTGGGTT--S.HHHH CS
  vATP-synt_AC39 185 kklggetaeilreilgfeiDlrniniilrskkygelskedrkkllipggslypeglealaeaedveellaal.kyteygelleealeeagslksl 278
                     +k+g+ t e +++il+fe+D+r+i+i+++s++ ++lske+r+++++++g+l p g+++la+ae+v ++ +a+    ey+++++++     s+ksl
      EPX72655.1 194 QKIGSGTFETMSRILEFEADRRAITITINSFG-TDLSKEERNNMYPSFGRLFPFGTSMLAKAENVGDVENACsLVKEYSSFFDQV-----SQKSL 282
                     ****8888************************.9*************************************************54.....59*** PP

                     HHHHHHHHHHHHHTTTSSSTSTHHHHHHHHHHHHHHHHHHHHHHHHHHT--SHH CS
  vATP-synt_AC39 279 edaldealvkllkkafrqqfsvgvfyaYlklkeqEirnlrwIaegiaqglpkek 332
                     +d + e +v+l+k af qqf++g++y++lkl+eqEirn++wIae+i+q+ +k++
      EPX72655.1 283 DDCFFETEVELNKLAFLQQFHYGIVYSFLKLREQEIRNITWIAECISQN-QKDR 335
                     *************************************************.9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       481  (0.026828); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 2352.65
//
Query:       EPX72656.1  [L=288]
Description: DUF887 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.7e-38  131.7  16.8    4.1e-38  131.1  16.8    1.3  1  TRAM_LAG1_CLN8  TLC domain
     0.0082   15.8   4.8       0.01   15.5   1.8    2.1  2  Ni_hydr_CYTB    Prokaryotic cytochrome b561
  ------ inclusion threshold ------
       0.16   11.9   6.4       0.24   11.3   0.6    2.8  3  DctQ            Tripartite ATP-independent periplasmic transp


Domain annotation for each model (and alignments):
>> TRAM_LAG1_CLN8  TLC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.1  16.8   6.8e-42   4.1e-38       1     197 [.      76     261 ..      76     262 .. 0.94

  Alignments for each domain:
  == domain 1  score: 131.1 bits;  conditional E-value: 6.8e-42
  TRAM_LAG1_CLN8   1 kfdervvslvqyllstvfglivlssspelwegyperilgathfllkayyllalgYfiydllvlllyekkrkdfvemliHhiitlvllvlsyvrnl 95 
                     ++d +vvs+vq++l  ++g+ +l++ +    + ++  +g++ ++   +y+la gYf++dl++++ y k  +   ++++H++++l+++++sy +++
      EPX72656.1  76 NWDSHVVSSVQSVLLISLGYLILREVN----NFNDKLFGYSVYAGD-IYALADGYFLWDLYITVRYAKITG--LGFVVHAVAALFVVTFSY-SPY 162
                     79***********************98....4457889999999**.********************9999..******************.*** PP

  TRAM_LAG1_CLN8  96 grvglvvlllhelsdpflnlrkilsylkkkskssklvlfngllfllsFfvcRlvllpylillsildvaklslstaplwlpliflilllvLqllnl 190
                     + ++ +++l +els+pfln++ +l++  +k ++sk ++ ng+l++l+Ff++R+v+++y  + +++++ + ++ + p  l l++l++++ L++lnl
      EPX72656.1 163 LMYYGPTYLSWELSTPFLNIHYFLDKT-NK-TGSKFQILNGILLILTFFFVRIVWGWYSAYSTSMEIIR-RVTEIPRGLSLFYLAANMSLNCLNL 254
                     ***************************.99.999**********************8877777777775.778899******************* PP

  TRAM_LAG1_CLN8 191 yWfyliv 197
                     +W ++++
      EPX72656.1 255 FWVFKMM 261
                     ******7 PP

>> Ni_hydr_CYTB  Prokaryotic cytochrome b561
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.1     0.058   3.5e+02      75     124 ..      46      99 ..      36     130 .. 0.66
   2 !   15.5   1.8   1.7e-06      0.01       8      84 ..     145     232 ..     127     239 .. 0.87

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.058
                   --STTTSSSSS----------------TT....THHHHHHHHHHHHHHHHHHHT CS
  Ni_hydr_CYTB  75 ifrqikrdltlllrgrkpeagknnplqkl....vhlllyvllvvliltGlllsf 124
                    f q+++ l+ +++++  ++ k+ ++        h++  v  v+li  G+l+  
    EPX72656.1  46 LFYQFINLLSPWISNKLSRHYKHLSRRTKlnwdSHVVSSVQSVLLISLGYLILR 99 
                   455566666666666666666666666666667777777777777777777754 PP

  == domain 2  score: 15.5 bits;  conditional E-value: 1.7e-06
                   HHHHHHHHHHHHHHHHHHHHHS------S-GGG-..............HHHHHHHHHHHHHHHH.HHHHHHH------------STTTSSSS CS
  Ni_hydr_CYTB   8 llHWlnallvvllllsgllianlhprlywgdsgk..............aralHklaGlvllall.lfrllwlkkakkpspriifrqikrdlt 84 
                   ++H + al+vv+   s +l+ + ++ l w+ s+               + ++ +l G++l++++ ++r++w+    + s  +   +i+r++t
    EPX72656.1 145 VVHAVAALFVVTFSYSPYLMYYGPTYLSWELSTPflnihyfldktnktGSKFQILNGILLILTFfFVRIVWG----WYSAYSTSMEIIRRVT 232
                   79*****************************9999*********99999999********************....5555555555555555 PP

>> DctQ  Tripartite ATP-independent periplasmic transporters, DctQ component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.24   1.4e+03     105     126 ..      83     104 ..      37     110 .. 0.70
   2 ?    4.7   0.5    0.0044        26      63     105 ..     144     185 ..     133     186 .. 0.78
   3 ?   11.3   0.6     4e-05      0.24      49     116 ..     181     245 ..     179     258 .. 0.76

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.24
        DctQ 105 wwvylvlpigaallalvalarl 126
                 + v++vl+i+++ l+l+ + ++
  EPX72656.1  83 SSVQSVLLISLGYLILREVNNF 104
                 4566778888888888877665 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.0044
        DctQ  63 rlleliadllallfaa..vliwagwlevaaalfeettpvlglplw 105
                  +++++a+l+++ f+   +l+++g    +++ +e +tp+l+++++
  EPX72656.1 144 FVVHAVAALFVVTFSYspYLMYYGP---TYLSWELSTPFLNIHYF 185
                 4666777777777666888888888...99999999999999875 PP

  == domain 3  score: 11.3 bits;  conditional E-value: 4e-05
        DctQ  49 rvdllverlpprvrrlleliadllallfaavliwagwlevaaalfeettpvlglplwwvylvlpigaa 116
                 ++ +++++ ++++ ++  l + ll+l f+ v i++gw+ +++  +e    v ++p+++     +  aa
  EPX72656.1 181 NIHYFLDKTNKTGSKFQILNGILLILTFFFVRIVWGWYSAYSTSMEIIRRVTEIPRGLSL---FYLAA 245
                 78899**********99999999**************77777777777777777776654...33333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       572  (0.0319036); expected 358.6 (0.02)
Passed bias filter:                      299  (0.0166769); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2181.93
//
Query:       EPX72657.1  [L=511]
Description: high-affinity import carrier for pyridoxine [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.9e-29  101.4  28.0    4.9e-29  101.4  28.0    2.1  2  MFS_1        Major Facilitator Superfamily
    2.6e-09   36.5  23.7    4.7e-08   32.3  23.6    2.3  1  Sugar_tr     Sugar (and other) transporter
  ------ inclusion threshold ------
        5.8    7.8   7.4        1.1   10.1   2.7    2.3  2  HKR_ArcB_TM  Histidine kinase receptor ArcB trans-membrane do


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.4  28.0   8.1e-33   4.9e-29       6     334 ..      78     434 ..      68     441 .. 0.74
   2 !   10.7  11.6   2.9e-05      0.17      68     177 ..     386     491 ..     386     505 .. 0.83

  Alignments for each domain:
  == domain 1  score: 101.4 bits;  conditional E-value: 8.1e-33
       MFS_1   6 flsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslwlllvlrvlqGlgagalfp 104
                 + ++++++++g++ +  +++ +++s+++  l l++  lg++++ ++lG+lsd  Gr++v++++++l++++ + ++++ ++  ++++ +++Gl+++++++
  EPX72657.1  78 IYVIWTSNAYGSIST-SVQDYFHVSAQVSTLNLSMNILGSGLGPMFLGPLSDINGRKPVYFCSIFLYVIFNISCALPKNVVQMVISHFITGLTGSTALT 175
                 445566666777777.89999*************************************************44444457777****************** PP

       MFS_1 105 agaaliadwfpkeergraigllsagfslGailgpllgglla.sslgWravfyilaivsllafvlfllllpeepperkrkspkeee........kgtgpa 194
                 ++a  i d+f++++ g+ ++l+  + + G i +p+  g+ +   +gWr+++yi+ iv+ +++vl  +ll  e  + k  s  e+          ++   
  EPX72657.1 176 NVAGGIPDIFSENKSGMPMSLFVWACAGGGIGAPIGTGVDSnPKFGWRWLYYINIIVGGFFLVL--ILLIPETLPMKVISRYELAegriiealPKV--- 269
                 ********************9999777777666777777778999****************886..777777777777777777566666555222... PP

       MFS_1 195 plvp..............awkallkdpvlw.illialllfffgfsglltllplylqevlgls......glllaglllallalvgailallagrlsdr.. 270
                    +              +++++++ p +  + l+ ++  ++ +++l +  p++ +  +++s      + +lag  + +++l++ + +++  r+ +r  
  EPX72657.1 270 ---KtsevfqkmkfistmGFRMMFTEPIIItMGLYNFYAYGISYFFLAAIWPVF-NLNYKMSsmsascT-YLAG--FVAYSLLF-CYQPIQDRIFRRsk 360
                 ...133333366666788888888888554455555555555555566666666.77777774433222.2222..22222222.33666666666688 PP

       MFS_1 271 ......lgrrrrlllallllllaalglallavtssavllllvlvliGfglgfv.....fpsllalasdlappeea 334
                       + ++ r + al+++ll+ +g++l+a+t +++++++ + ++G++++ +     ++s+l++++d +p   a
  EPX72657.1 361 kgnngvVVPEARFTSALGFTLLFPAGMFLFAFTCNPPFHWM-VPIVGLAMSSIanshnWSSILNYLTDCYPMISA 434
                 888888888************************66666665.445555333333555599999999999974444 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 2.9e-05
       MFS_1  68 glllfalglllllfasslw.lllvlrvlqGlgagalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllaf 165
                 g++lfa++ + + f   +w + +v+ ++++++ +  +++++ +++d +p    ++a++ +++ + +Ga++ + ++ ++ +  +  ++   +a++s+   
  EPX72657.1 386 GMFLFAFT-CNPPF---HWmVPIVGLAMSSIANSHNWSSILNYLTDCYPM-ISASAVAAFTLPSFVGAAIFAHVSIIMFDKMSTKWAVATMAFISISIP 479
                 57777777.55555...78788***************************8.********************************9999999999999995 PP

       MFS_1 166 vlfllllpeepp 177
                  +++ +++  ++
  EPX72657.1 480 FIIYSFYFFGEK 491
                 544555544443 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.3  23.6   7.8e-12   4.7e-08      18     260 ..      83     299 ..      67     490 .. 0.69

  Alignments for each domain:
  == domain 1  score: 32.3 bits;  conditional E-value: 7.8e-12
                 CGGGTHHHHHHHHTSTT--SHHHHHH.......HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHH CS
    Sugar_tr  18 vigafltllkfaknfglsksksskee....ssvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlv 112
                 + +a+ +++  +             +    s+  s+l +s+ ++G+ +G +f+g+l+d+ GRk+++ ++++l+vi ++ +a+ k   +v +++++ +++
  EPX72657.1  83 TSNAYGSISTSVQ------------DyfhvSAQVSTLNLSMNILGSGLGPMFLGPLSDINGRKPVYFCSIFLYVIFNISCALPK---NVVQMVISHFIT 166
                 4444443333222............02223344567889*********************************************...9*********** PP

                 HHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHHHHHHHHHHGGGS---HHHHHHTT-HHHHHHHH CS
    Sugar_tr 113 GigvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglglnktsnadgwrillglqlvpallllilllflPESPrylvekgkeeeakevl 211
                 G+   +a + v   i  i  +++ g+ +sl+ +a++ G + +a +g+g++ + +  gwr+l +++++   ++l+l+l++PE+    v+  ++e a+  +
  EPX72657.1 167 GLTGSTALTNVAGGIPDIFSENKSGMPMSLFVWACAGGGI-GAPIGTGVDSNPK-FGWRWLYYINIIVGGFFLVLILLIPETLPMKVI-SRYELAEGRI 262
                 ***9999999*********************999998886.6678999988888.9**************************333333.4466555555 PP

                 HHHHHCHHHHHHHHHHHHHHHHHHH.....HTTHHHHSH...HHHHHHH CS
    Sugar_tr 212 aklrgeedadrelaeekdsleaeqeeekaswkellssktvrqrlligvv 260
                  +    ++++ +  e +++++  +++     ++++++     +++i ++
  EPX72657.1 263 IE----ALPKVKTSEVFQKMKFISTMG---FRMMFTE-----PIIITMG 299
                 55....466666666666666664433...3333333.....4444443 PP

>> HKR_ArcB_TM  Histidine kinase receptor ArcB trans-membrane domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.2       2.2   1.3e+04      18      33 ..     148     166 ..     138     171 .. 0.49
   2 ?   10.1   2.7   0.00019       1.1      22      59 ..     448     485 ..     432     493 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 2.2
  HKR_ArcB_TM  18 ivlal...liqillsllls 33 
                  i++al   ++q+++s +++
   EPX72657.1 148 ISCALpknVVQMVISHFIT 166
                  3333222255666665555 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00019
  HKR_ArcB_TM  22 lliqillslllsgeveiedllrsilfgllsaPwvlYFl 59 
                   +i + +s+++ ++++++  +  ++f+ +s P+++Y +
   EPX72657.1 448 AAIFAHVSIIMFDKMSTKWAVATMAFISISIPFIIYSF 485
                  45667799***************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (511 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       855  (0.0476881); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.23s 00:00:00.82 Elapsed: 00:00:00.40
# Mc/sec: 3827.17
//
Query:       EPX72658.1  [L=687]
Description: poly(A)-specific ribonuclease complex subunit Pan3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-31  107.9   0.7    1.2e-29  103.1   0.7    2.3  1  Pan3_PK   Pan3 Pseudokinase domain
  ------ inclusion threshold ------
       0.14   11.5   0.0        0.3   10.4   0.0    1.5  1  Pkinase   Protein kinase domain


Domain annotation for each model (and alignments):
>> Pan3_PK  Pan3 Pseudokinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.1   0.7   1.3e-33   1.2e-29       1     138 []     523     675 ..     523     675 .. 0.87

  Alignments for each domain:
  == domain 1  score: 103.1 bits;  conditional E-value: 1.3e-33
     Pan3_PK   1 ieellkaiaerlleeldsaleesdlleselskelengrlvrlllklgfinerpefekdkkwsetgdryllkLFrdyvFhqvd...eegkpv........ 88 
                 i+++l+ + + +++++++++  +d+++s+l++++en rl+r+llk++f+ +rpef +d++ws  g  ++++LFr+y+F   +    +g+p+        
  EPX72658.1 523 IDHVLPSVIPYIITNYENSTLMQDVYQSHLAEQVENDRLLRVLLKFEFLDDRPEFLEDPDWSPCGRFWIIRLFRKYMFRVKQysrGDGHPIksqlldas 621
                 6789999999********************************************************************754311145666444444444 PP

     Pan3_PK  89 ......ldlahvlscLnklDagveekilLvsrdeqsvlvvsYkelkkllesafeeL 138
                       +dl+h+l+cLnklDag+eek+lL  +d+ + ++vsYk++k+++++af eL
  EPX72658.1 622 kliernIDLSHLLQCLNKLDAGIEEKLLL--EDSCNRIIVSYKDVKTAINTAFMEL 675
                 4444448*******************998..7999******************997 PP

>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   3.3e-05       0.3      53     144 ..     338     447 ..     298     460 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 3.3e-05
                 HHHSCTTB--EEEEEEE....SSEEEEEEE--TTEB.HHHHHH...............HHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEE CS
     Pkinase  53 kklkhpnivrlyevfee....kdelylvleyvegge.ladlle...............rkgslseeeakkiakqilegleylHskgiiHrDlKpeNiLi 131
                  k+++p+i+ ++e+f++    + ++++v ey +    l dl                 +    +e+ +  ia+q++ +l+ +Hs+g+  + +  +N+L+
  EPX72658.1 338 TKIRSPYIMSIKEAFTThafgQPSVVFVYEYTPSCPsLYDLFFsspvfrkkaasyyfsKPLLSTEKVLWTIASQLIGALHTIHSAGMAAKMITAKNVLM 436
                 577788888888888887777777888888876443444444433333333333443233445666899****************************** PP

                 ETTTEEEE-SGTT CS
     Pkinase 132 dekgelKitDFGl 144
                    g+l+++ FGl
  EPX72658.1 437 V--GKLRVALFGL 447
                 9..8999988887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (687 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       403  (0.0224776); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.46
# Mc/sec: 4530.86
//
Query:       EPX72659.1  [L=863]
Description: karyopherin Kap95 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.2e-18   63.9   8.8    0.00045   20.2   0.0    9.1  9  HEAT      HEAT repeat
    2.7e-14   53.3  10.3    2.7e-08   34.1   0.0    6.6  7  HEAT_EZ   HEAT-like repeat
    5.4e-12   45.5   1.2    2.2e-11   43.5   0.7    2.5  2  IBN_N     Importin-beta N-terminal domain
    5.8e-07   29.8   9.4     0.0068   16.8   0.0    5.8  6  HEAT_2    HEAT repeats
    0.00019   21.4   6.1        2.5    8.3   0.0    5.8  5  Arm       Armadillo/beta-catenin-like repeat
     0.0025   17.4   2.0        1.2    8.6   0.0    4.0  5  CLASP_N   CLASP N terminal
  ------ inclusion threshold ------
      0.031   14.0   0.2       0.67    9.7   0.0    3.2  4  TIP120    TATA-binding protein interacting (TIP20)
       0.18   11.7   4.8        4.7    7.1   0.5    4.7  5  DUF3385   Domain of unknown function (DUF3385)
       0.31   11.0   8.0        1.3    9.0   0.5    4.7  6  UME       UME (NUC010) domain
        0.8    9.6   4.5         16    5.4   0.5    3.6  4  Sec7_N    Guanine nucleotide exchange factor in Golgi transpo


Domain annotation for each model (and alignments):
>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       1.9   3.4e+03      11      20 ..      12      21 ..       5      26 .. 0.79
   2 ?   -0.4   0.0       1.1     2e+03      10      25 ..      47      62 ..      40      63 .. 0.75
   3 ?    2.0   0.0      0.19   3.4e+02      12      26 ..     186     200 ..     182     205 .. 0.85
   4 !    8.7   0.0    0.0013       2.3       1      28 [.     218     245 ..     218     248 .. 0.94
   5 !    8.8   0.2    0.0012       2.2       1      30 [.     322     358 ..     322     359 .. 0.85
   6 !   17.2   0.0   2.5e-06    0.0044       2      29 ..     368     395 ..     367     396 .. 0.89
   7 !   20.2   0.0   2.5e-07   0.00045       2      29 ..     410     437 ..     409     439 .. 0.94
   8 ?    0.7   0.1      0.48   8.6e+02      12      28 ..     462     478 ..     452     478 .. 0.83
   9 ?   -1.4   0.0       2.2     4e+03      19      30 ..     804     815 ..     803     816 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 1.9
                -SSHHHHHHH CS
        HEAT 11 DpspeVReaA 20
                +p+++VR +A
  EPX72659.1 12 SPDANVRLNA 21
                89*****998 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 1.1
                T-SSHHHHHHHHHHHH CS
        HEAT 10 sDpspeVReaAakaLg 25
                +++++ +R+aA +aL 
  EPX72659.1 47 ESSASYIRMAAGLALK 62
                4567779****99996 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.19
                 SSHHHHHHHHHHHHH CS
        HEAT  12 pspeVReaAakaLga 26 
                 p+  VR aA+ aL +
  EPX72659.1 186 PDVVVRLAALGALYD 200
                 6788*******9975 PP

  == domain 4  score: 8.7 bits;  conditional E-value: 0.0013
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgala 28 
                 ++ +++++ ++p++ V  aA+ +L++++
  EPX72659.1 218 IMQVVCEATQSPEAPVQTAAFGCLVKIM 245
                 7999*********************997 PP

  == domain 5  score: 8.8 bits;  conditional E-value: 0.0012
                 HHHHHHHH.H.T-.....SSHHHHHHHHHHHHHHHHC CS
        HEAT   1 llPlllkl.l.sD.....pspeVReaAakaLgalaev 30 
                 +lP+ll+l + +D     +++++ +aAa +L  +a+v
  EPX72659.1 322 ILPVLLELlCkQDedadeDDWNISMAAATCLQLFAQV 358
                 688888885555588*****************99997 PP

  == domain 6  score: 17.2 bits;  conditional E-value: 2.5e-06
                 HHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgalae 29 
                 l ++ +++++p++++ReaA+ a+g ++e
  EPX72659.1 368 LAFVEQNIQSPDWHQREAAVMAFGSVLE 395
                 5678999*****************9887 PP

  == domain 7  score: 20.2 bits;  conditional E-value: 2.5e-07
                 HHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgalae 29 
                 lP+l+++++Dp  +V +++a+aLg+++ 
  EPX72659.1 410 LPVLIHMMKDPVIFVKDTTAWALGQISN 437
                 8*************************86 PP

  == domain 8  score: 0.7 bits;  conditional E-value: 0.48
                 SSHHHHHHHHHHHHHHH CS
        HEAT  12 pspeVReaAakaLgala 28 
                 +sp++ +++++a+ +l+
  EPX72659.1 462 DSPRIVANCCWAFMNLV 478
                 589999******99885 PP

  == domain 9  score: -1.4 bits;  conditional E-value: 2.2
                 HHHHHHHHHHHC CS
        HEAT  19 aAakaLgalaev 30 
                 aA+  Lg+lae 
  EPX72659.1 804 AALGLLGDLAES 815
                 8999*****996 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.2       6.4   1.2e+04       3      32 ..      91     119 ..      90     132 .. 0.50
   2 !    9.3   0.0   0.00093       1.7       4      52 ..     147     198 ..     144     199 .. 0.89
   3 ?    1.2   0.0      0.31   5.6e+02      33      52 ..     222     241 ..     215     244 .. 0.79
   4 ?   -1.8   0.2       2.8     5e+03      28      42 ..     321     336 ..     320     338 .. 0.76
   5 !   34.1   0.0   1.5e-11   2.7e-08       1      55 []     380     435 ..     380     435 .. 0.96
   6 !    9.0   0.0    0.0011         2      25      52 ..     448     474 ..     438     477 .. 0.77
   7 ?   -2.9   0.0       5.9   1.1e+04      21      39 ..     590     608 ..     578     614 .. 0.75

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 6.4
     HEAT_EZ   3 vRraAawaLGrlaggepellqplvpeilpa 32 
                 v+ +A+ +L++ + ++++  + ++ ++++a
  EPX72659.1  91 VKIGALQTLASQEHQAGQ-SAAQLVAAIAA 119
                 566677777532222222.22233334444 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00093
     HEAT_EZ   4 RraAawaLGr.laggepellqplvpeilpaLlalLnddsdeV..RaaAagaL 52 
                 + + + ++G  ++++ +e l+++  +il a +a+ + ++++V  R aA+gaL
  EPX72659.1 147 KQHSLQTIGYiCEAVPSEILSTQSNAILTAVVAGARKEEPDVvvRLAALGAL 198
                 5677888999888899999****************999998889*******9 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.31
     HEAT_EZ  33 LlalLnddsdeVRaaAagaL 52 
                  + + ++++++V++aA g+L
  EPX72659.1 222 VCEATQSPEAPVQTAAFGCL 241
                 5667789999********99 PP

  == domain 4  score: -1.8 bits;  conditional E-value: 2.8
     HEAT_EZ  28 eilpaLlalL.nddsd 42 
                 +ilp Ll lL + d+d
  EPX72659.1 321 DILPVLLELLcKQDED 336
                 7999999999555655 PP

  == domain 5  score: 34.1 bits;  conditional E-value: 1.5e-11
     HEAT_EZ   1 wrvRraAawaLGr.laggepellqplvpeilpaLlalLnddsdeVRaaAagaLgnl 55 
                 w +R+aA++a+G+ l+g +   l plv ++lp L+ +++d+   V+ ++a+aLg++
  EPX72659.1 380 WHQREAAVMAFGSvLEGPNVAMLTPLVNQALPVLIHMMKDPVIFVKDTTAWALGQI 435
                 899**********999999999********************************98 PP

  == domain 6  score: 9.0 bits;  conditional E-value: 0.0011
     HEAT_EZ  25 lvpeilpaLlalLnddsdeVRaaAagaL 52 
                 ++pe++ aLl +L+ ds+++ a++++a+
  EPX72659.1 448 HLPELVTALLTGLT-DSPRIVANCCWAF 474
                 56777777776666.69*********97 PP

  == domain 7  score: -2.9 bits;  conditional E-value: 5.9
     HEAT_EZ  21 llqplvpeilpaLlalLnd 39 
                 +++   ++i+ +Ll+++++
  EPX72659.1 590 DIRSTSDQIMTLLLQTMQT 608
                 5666678999999988865 PP

>> IBN_N  Importin-beta N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.5   0.7   1.2e-14   2.2e-11       1      73 [.      21     100 ..      21     101 .. 0.97
   2 ?   -2.4   0.0       2.6   4.7e+03      17      44 ..     502     529 ..     499     534 .. 0.83

  Alignments for each domain:
  == domain 1  score: 43.5 bits;  conditional E-value: 1.2e-14
                 HHHHHHHHHC..STCHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHHHHGGSCCCHC.......GSXHHHHHHHHHHHHHHHH CS
       IBN_N   1 AekqLkqlek..qpgflsallqilanseselevRqlAalyLknlitkhWsdeeekq.......slpseekeqIrnnllnllg 73 
                 AekqL++++   + +++++l q lan++s  ++R++A+l Lkn+it++  d+++k        slp e+k q++  +l++l+
  EPX72659.1  21 AEKQLENAARtdFAQYMLLLTQELANESSASYIRMAAGLALKNSITAR--DAARKVeyeqlwqSLPIEVKHQVKIGALQTLA 100
                 8*******999*************************************..9999999**********************997 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 2.6
                 HHHHHHHCTTSHHHHHHHHHHHHHHHHH CS
       IBN_N  17 allqilanseselevRqlAalyLknlit 44 
                 all++  ++ +e ++R ++  +L   it
  EPX72659.1 502 ALLHVTDQKGNESNSRTSGYETLSTVIT 529
                 7999999999999**9988877777765 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   1.2    0.0028         5       4      58 ..       7      64 ..       4     100 .. 0.63
   2 ?    0.9   0.0      0.34   6.1e+02      10      57 ..     184     243 ..     171     246 .. 0.61
   3 !   10.0   0.1   0.00049      0.87      27      87 ..     317     390 ..     312     391 .. 0.72
   4 !   16.8   0.0   3.8e-06    0.0068      13      88 .]     341     433 ..     337     433 .. 0.72
   5 !   15.8   0.0   7.8e-06     0.014       8      59 ..     375     436 ..     364     469 .. 0.59
   6 ?   -2.5   0.0         4   7.1e+03      17      57 ..     573     625 ..     565     655 .. 0.57

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0028
      HEAT_2  4 LlqalendpdpevrraairaLgrignp...ealpaLve.ll.ededpavRraaaeaLgai 58
                L q l  +pd +vr +a ++L + + +   +++ +L++ l+ e++ +++R+aa  aL   
  EPX72659.1  7 LAQTL--SPDANVRLNAEKQLENAARTdfaQYMLLLTQeLAnESSASYIRMAAGLALKNS 64
                44444..79*************6666533377788887577667779**********643 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.34
      HEAT_2  10 ndpdpevrraairaLg........rignp....ealpaLvellededpavRraaaeaLga 57 
                 + pd  vr aa+ aL         +++n+     +++ + e+ +++++ v+ aa   L++
  EPX72659.1 184 EEPDVVVRLAALGALYdslefvrdNFNNEaernYIMQVVCEATQSPEAPVQTAAFGCLVK 243
                 466777788888877766666665555553333445555555566666677777666665 PP

  == domain 3  score: 10.0 bits;  conditional E-value: 0.00049
      HEAT_2  27 ignpealpaLvell..ed.....edpavRraaaeaLgai....gd...pealpaLkellddddddvvReaAaeaL 87 
                  g  ++lp L+ell  +d     +d+++ +aaa+ L  +    gd   + +l++ ++  +++d+   ReaA+ a 
  EPX72659.1 317 AGGADILPVLLELLckQDedadeDDWNISMAAATCLQLFaqviGDlivNPVLAFVEQNIQSPDWHQ-REAAVMAF 390
                 556688999999998856334434489999999999755222344555669999999999999888.88999886 PP

  == domain 4  score: 16.8 bits;  conditional E-value: 3.8e-06
      HEAT_2  13 dpevrraairaLg........rignpealpaLvellededpavRraaaeaLgai..g.........dpealpaLkellddddddvvReaAaeaLa 88 
                 d+++  aa+ +L          i n  +l+ + + ++++d++ R+aa++a g +  g          ++alp+L ++++ d++ +v+  +a+aL+
  EPX72659.1 341 DWNISMAAATCLQlfaqvigdLIVN-PVLAFVEQNIQSPDWHQREAAVMAFGSVleGpnvamltplVNQALPVLIHMMK-DPVIFVKDTTAWALG 433
                 6666667777777555433322333.48999999******************87662334444443499*********7.578899**9999996 PP

  == domain 5  score: 15.8 bits;  conditional E-value: 7.8e-06
      HEAT_2   8 lendpdpevrraairaLgrignp...........ealpaLvellededpavRraaaeaLgaig 59 
                 + ++pd+  r aa++a g+  +            +alp L+ +++d+   v  + a+aLg+i 
  EPX72659.1 375 I-QSPDWHQREAAVMAFGSVLEGpnvamltplvnQALPVLIHMMKDPVIFVKDTTAWALGQIS 436
                 3.5777777777777777432222344445566677777777777777777777777777663 PP

  == domain 6  score: -2.5 bits;  conditional E-value: 4
      HEAT_2  17 rraairaLg..........rignpealpaLvelled.ed.pavRraaaeaLga 57 
                 + + + +L           r  +++++ +L++ +++ ++ + v + +  a ga
  EPX72659.1 573 QSNLCNVLTsiirrfgpdiRSTSDQIMTLLLQTMQTaPKqSVVHEDVLLAVGA 625
                 44555555433332224222223377777777774424413444445555555 PP

>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       1.2   2.2e+03      18      36 ..     223     241 ..     218     245 .. 0.79
   2 ?    1.8   0.1      0.15   2.7e+02      11      27 ..     320     336 ..     318     337 .. 0.86
   3 !    8.3   0.0    0.0014       2.5      12      40 ..     408     436 ..     403     436 .. 0.89
   4 !    8.0   0.2    0.0016         3      15      39 ..     450     477 ..     449     478 .. 0.81
   5 ?   -1.6   0.0       1.8   3.3e+03      17      40 ..     787     813 ..     786     814 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1.2
                 HHHTTTSSHHHHHHHHHHH CS
         Arm  18 vrLLssedeevqeeAawAL 36 
                 ++  +s+   vq++A ++L
  EPX72659.1 223 CEATQSPEAPVQTAAFGCL 241
                 5556799999*****9999 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.15
                 TTHHHHHHHHTTTSSHH CS
         Arm  11 aGavppLvrLLssedee 27 
                 a ++p+L++LL  +de+
  EPX72659.1 320 ADILPVLLELLCKQDED 336
                 5689********88875 PP

  == domain 3  score: 8.3 bits;  conditional E-value: 0.0014
                 THHHHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm  12 GavppLvrLLssedeevqeeAawALsNLa 40 
                  a+p+L+++++++   v+   awAL+ ++
  EPX72659.1 408 QALPVLIHMMKDPVIFVKDTTAWALGQIS 436
                 37***********************9986 PP

  == domain 4  score: 8.0 bits;  conditional E-value: 0.0016
                 HHHHHHTT...TSSHHHHHHHHHHHHHH CS
         Arm  15 ppLvrLLs...sedeevqeeAawALsNL 39 
                 p Lv+ L    +++++++ +++wA  NL
  EPX72659.1 450 PELVTALLtglTDSPRIVANCCWAFMNL 477
                 66666666699*************8776 PP

  == domain 5  score: -1.6 bits;  conditional E-value: 1.8
                 HHHHTT...TSSHHHHHHHHHHHHHHT CS
         Arm  17 LvrLLs...sedeevqeeAawALsNLa 40 
                 L+++++      e+++++A++ L+ La
  EPX72659.1 787 LLHMITkdrERTESLTRAALGLLGDLA 813
                 667777666777899999999998776 PP

>> CLASP_N  CLASP N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       3.2   5.8e+03     107     125 ..     163     181 ..     145     185 .. 0.73
   2 ?   -2.7   0.0         2   3.6e+03       8      37 ..     367     396 ..     363     402 .. 0.78
   3 ?    1.4   0.0      0.11     2e+02      88     185 ..     402     504 ..     394     510 .. 0.73
   4 !    8.6   0.0   0.00068       1.2      69     105 ..     572     608 ..     568     642 .. 0.90
   5 ?    3.6   0.0     0.023        41      68     104 ..     656     692 ..     644     698 .. 0.91

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 3.2
     CLASP_N 107 Kkiisqnanqalaallsna 125
                  +i s+++n++l+a+++ a
  EPX72659.1 163 SEILSTQSNAILTAVVAGA 181
                 5788888888888887766 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 2
     CLASP_N   8 llaafegketelnwdaReknilklrslikg 37 
                 +la+ e+  +  +w +Re++++ + s ++g
  EPX72659.1 367 VLAFVEQNIQSPDWHQREAAVMAFGSVLEG 396
                 5666666777789********999998877 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.11
     CLASP_N  88 ldpmveillptLlkllgdtKkiisqnanqalaallsnas..fspri..lqvlsvalqdKnvqpReys.aiwLkilltrfeshkskleasllldlieksl 181
                 l p+v++ lp+L+ ++ d    +  +++ al ++ + +   ++p+i    +++++l++ + +pR+++ + w  + l  +   + +++ sl+   +e ++
  EPX72659.1 402 LTPLVNQALPVLIHMMKDPVIFVKDTTAWALGQISNFVAeaINPEIhlPELVTALLTGLTDSPRIVAnCCWAFMNLVCHFAPEDSHHMSLMTPFYEAII 500
                 789999************999999999999988877665556788775677888889999999975435565555555544555555555556677777 PP

     CLASP_N 182 kkgl 185
                  ++l
  EPX72659.1 501 AALL 504
                 7766 PP

  == domain 4  score: 8.6 bits;  conditional E-value: 0.00068
     CLASP_N  69 lsstgchllkelaiqlkeqldpmveillptLlkllgd 105
                 l s++c +l  +++ +++++ + +++++++Ll+ ++ 
  EPX72659.1 572 LQSNLCNVLTSIIRRFGPDIRSTSDQIMTLLLQTMQT 608
                 789*****************************99876 PP

  == domain 5  score: 3.6 bits;  conditional E-value: 0.023
     CLASP_N  68 tlsstgchllkelaiqlkeqldpmveillptLlkllg 104
                 +l+s ++ l+ +la+ l+ ++ p+++ ++++L++ l+
  EPX72659.1 656 QLCSVAVGLVGDLARALNAKILPYCNEFMTILVQDLQ 692
                 6899999*************************98776 PP

>> TIP120  TATA-binding protein interacting (TIP20)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       1.6   2.9e+03      80     124 ..      53      97 ..      32     130 .. 0.58
   2 ?   -3.2   0.0       3.4     6e+03      47      97 ..     199     250 ..     191     284 .. 0.67
   3 ?    9.7   0.0   0.00037      0.67      56     115 ..     442     501 ..     434     519 .. 0.74
   4 ?   -0.7   0.0      0.57     1e+03      77     124 ..     569     616 ..     511     619 .. 0.47

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 1.6
      TIP120  80 ikllcnlmlsklvalapeevlerldelvealrktlskklkekavk 124
                 i++ + l l + ++ + ++   + ++l ++l   +++++k  a +
  EPX72659.1  53 IRMAAGLALKNSITARDAARKVEYEQLWQSLPIEVKHQVKIGALQ 97 
                 444444444444444444444444555555555555555555554 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 3.4
      TIP120  47 YetlytlletaldrldlselldrvlaGlsDe.hdikllcnlmlsklvalape 97 
                 Y+ l  + +++ ++ + + +++ v ++ +     +++ ++ +l+k+++l  +
  EPX72659.1 199 YDSLEFVRDNFNNEAERNYIMQVVCEATQSPeAPVQTAAFGCLVKIMHLYYD 250
                 6666666666666666667777766666544477777777777777776554 PP

  == domain 3  score: 9.7 bits;  conditional E-value: 0.00037
      TIP120  56 taldrldlselldrvlaGlsDehdikllcnlmlsklvalapeevlerldelvealrktls 115
                 ++  +++l el++ +l+Gl+D+  i + c+   ++lv     e +++++ ++  ++++++
  EPX72659.1 442 AINPEIHLPELVTALLTGLTDSPRIVANCCWAFMNLVCHFAPEDSHHMSLMTPFYEAIIA 501
                 4556799************************99999876555555555555555555444 PP

  == domain 4  score: -0.7 bits;  conditional E-value: 0.57
      TIP120  77 ehdikllcnlmlsklvalapeevlerldelvealrktlskklkekavk 124
                 +++ +   + +l+ ++     ++ +  d++++ l +t+++ +k++ v 
  EPX72659.1 569 HDELQSNLCNVLTSIIRRFGPDIRSTSDQIMTLLLQTMQTAPKQSVVH 616
                 334444445555555555555666666666666666666666666665 PP

>> DUF3385  Domain of unknown function (DUF3385)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.46   8.2e+02      12     122 ..     131     165 ..      88     246 .. 0.71
   2 ?   -0.1   0.0      0.43   7.7e+02     102     158 ..     381     437 ..     328     440 .. 0.68
   3 ?    0.9   0.0       0.2   3.7e+02     123     158 ..     493     529 ..     485     531 .. 0.78
   4 ?    7.1   0.5    0.0026       4.7      87     144 ..     556     613 ..     509     630 .. 0.81
   5 ?   -2.3   0.0         2   3.6e+03      10      36 ..     783     810 ..     776     847 .. 0.63

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.46
     DUF3385  12 LelLlnilkteqsqsirrevikllGilGALDPykhkqveeraedkkrreeaaretdlsllmvglspsneeyyptvvinaLlrilkdpslsshhaavvea 110
                 + +L+  +                                                                             d + ss +++ +++
  EPX72659.1 131 MVTLVANVG----------------------------------------------------------------------------DGQPSSLKQHSLQT 153
                 333333333............................................................................33334444444555 PP

     DUF3385 111 imnifktlglkc 122
                 i +i++ + ++ 
  EPX72659.1 154 IGYICEAVPSEI 165
                 555555544444 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.43
     DUF3385 102 shhaavveaimnifktlglkc.vpfLdqiipallsvirtteesnlrefllqqLatLvs 158
                 ++++a+v a  ++++  ++ + +p+++q +p l++++++     ++++  ++L+++ +
  EPX72659.1 381 HQREAAVMAFGSVLEGPNVAMlTPLVNQALPVLIHMMKDPVI-FVKDTTAWALGQISN 437
                 356778888888888888888888999999999999997544.666666666666655 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.2
     DUF3385 123 vpfLdqiipallsvirtt.eesnlrefllqqLatLvs 158
                 +pf + ii all+v+ +  +esn r + ++ L+t ++
  EPX72659.1 493 TPFYEAIIAALLHVTDQKgNESNSRTSGYETLSTVIT 529
                 799***********98541566788888888888765 PP

  == domain 4  score: 7.1 bits;  conditional E-value: 0.0026
     DUF3385  87 vinaLlrilkdpslsshhaavveaimnifktlglkcvpfLdqiipallsvirtteesn 144
                 v n++l i + ++ ++ +++  +++++i++  g    ++ dqi+  ll++++t+++++
  EPX72659.1 556 VQNQILDIEERANHDELQSNLCNVLTSIIRRFGPDIRSTSDQIMTLLLQTMQTAPKQS 613
                 567777777888888999999*******************************998865 PP

  == domain 5  score: -2.3 bits;  conditional E-value: 2
     DUF3385  10 qLLelLlnilkte.qsqsirrevikllG 36 
                 +++ lL  i k   +++s+ r ++ llG
  EPX72659.1 783 SMFALLHMITKDReRTESLTRAALGLLG 810
                 4555555555544235566666555555 PP

>> UME  UME (NUC010) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       7.4   1.3e+04      25      47 ..     143     165 ..     135     176 .. 0.75
   2 ?    0.1   0.1      0.43   7.8e+02      48      78 ..     446     475 ..     406     505 .. 0.62
   3 ?    9.0   0.5   0.00073       1.3       9      68 ..     552     612 ..     546     633 .. 0.77
   4 ?    2.8   0.1     0.061   1.1e+02      28      84 ..     615     674 ..     608     729 .. 0.82
   5 ?   -0.3   0.0      0.56     1e+03       9      63 ..     683     735 ..     672     746 .. 0.73
   6 ?   -2.9   0.0       3.6   6.4e+03       7      44 ..     755     792 ..     754     798 .. 0.77

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 7.4
         UME  25 slaekkraikaleeliklagssi 47 
                 + + k+++++ ++ + + + s+i
  EPX72659.1 143 PSSLKQHSLQTIGYICEAVPSEI 165
                 67778888998888888777765 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.43
         UME  48 ssalpqimacLqsaleidelrsaalsvWatl 78 
                 ++ lp +++ L ++l +   r +a  +Wa +
  EPX72659.1 446 EIHLPELVTALLTGLTD-SPRIVANCCWAFM 475
                 24556667888888876.4677777777765 PP

  == domain 3  score: 9.0 bits;  conditional E-value: 0.00073
         UME   9 iltrlseklndshgkk.slaekkraikaleeliklagssissalpqimacLqsaleidelr 68 
                 i  ++++++ d +++  + + + +  + l  +i+ +g+ i+s   qim++L ++++++  +
  EPX72659.1 552 ISIQVQNQILDIEERAnHDELQSNLCNVLTSIIRRFGPDIRSTSDQIMTLLLQTMQTAPKQ 612
                 66677888888888873444555566889**********************9999986444 PP

  == domain 4  score: 2.8 bits;  conditional E-value: 0.061
         UME  28 ekkraikaleeliklagss....issalpqimacLqsaleidelrsaalsvWatllsnled 84 
                   + ++ a +++++ ++++    +ss++p +++ L +  e  +l+s+a+     l++ l+ 
  EPX72659.1 615 VHEDVLLAVGAMMNSLEEQfevyVSSFAPYLSVALSNEQEY-QLCSVAVGLVGDLARALNA 674
                 56788999999999999998888888888888888888877.7999998877777777765 PP

  == domain 5  score: -0.3 bits;  conditional E-value: 0.56
         UME   9 iltrlseklndshgkkslaekkraikaleeliklagssissalpqimacLqsale 63 
                 ++t l+++l++s    + + k  ++ + +++   +g + +++l  +m++Lq+a +
  EPX72659.1 683 FMTILVQDLQSSVL--DRNVKPAILSCFSDIALAIGAAFETYLEAVMVLLQQASS 735
                 45555555544444..344588889999999999999999999999999999865 PP

  == domain 6  score: -2.9 bits;  conditional E-value: 3.6
         UME   7 lgiltrlseklndshgkkslaekkraikaleeliklag 44 
                 lgi+  ++   + ++  + l+  + +i+++ +l++++ 
  EPX72659.1 755 LGIVEAFVGITQAVRTDNRLDLIQPYIHSMFALLHMIT 792
                 68888888888888888888888888888888877765 PP

>> Sec7_N  Guanine nucleotide exchange factor in Golgi transport N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.32   5.8e+02      60     107 ..     213     259 ..     172     288 .. 0.80
   2 ?   -3.5   0.0       4.6   8.3e+03      65      96 ..     452     481 ..     442     484 .. 0.72
   3 ?    5.4   0.5    0.0089        16      24      98 ..     523     608 ..     498     617 .. 0.81
   4 ?    2.4   0.1     0.072   1.3e+02      43     135 ..     619     711 ..     615     724 .. 0.81

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.32
      Sec7_N  60 llkqklcplLlknlsespsfpvferslrivllLlkkfrseLktEievf 107
                 + +++++++++    +sp+ pv + ++ +++ +++ +++ +   +e  
  EPX72659.1 213 AERNYIMQVVCEAT-QSPEAPVQTAAFGCLVKIMHLYYDLMPFYMEKA 259
                 55899999999999.99*******9*9999999999999887666655 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 4.6
      Sec7_N  65 lcplLlknlsespsfpvferslrivllLlkkf 96 
                 l+ +Ll+ l  + s++++  ++  +++L+ +f
  EPX72659.1 452 LVTALLTGL--TDSPRIVANCCWAFMNLVCHF 481
                 455555555..567888888888888887776 PP

  == domain 3  score: 5.4 bits;  conditional E-value: 0.0089
      Sec7_N  24 kflslaersktfsLeLlesvlsnhgdvfr............khpellqllkqklcplLlknlsespsfpvferslrivllLlkkfrs 98 
                 +++ +   s  ++L ++ +vl+  ++ ++            ++    + l+++lc++L+ ++  +  + + + s +i+ lLl+ + +
  EPX72659.1 523 TLSTVITFSSDTALPIIANVLTVTMSRLEisiqvqnqildiEERANHDELQSNLCNVLTSII-RRFGPDIRSTSDQIMTLLLQTMQT 608
                 4336777788899999999999999988899999999999888888999*************.888999999999999999998876 PP

  == domain 4  score: 2.4 bits;  conditional E-value: 0.072
      Sec7_N  43 vlsnhgdvfrkhpellqllkqklcplLlknlsespsfpvferslrivllLlkkfrseLktEievflsllilillesdsslwqrvlaLeilrrl 135
                 vl   g ++++ +e+ ++  +   p L+  ls++++ +++++++ +v  L + + +++   +  f++ l++ l +s    + +  +L ++ ++
  EPX72659.1 619 VLLAVGAMMNSLEEQFEVYVSSFAPYLSVALSNEQEYQLCSVAVGLVGDLARALNAKILPYCNEFMTILVQDLQSSVLDRNVKPAILSCFSDI 711
                 555566677788888888889999999999999999*****9999999999999999999999999999999955566667777777777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (863 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       580  (0.0323498); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.76u 0.31s 00:00:01.07 Elapsed: 00:00:00.52
# Mc/sec: 5020.77
//
Query:       EPX72660.1  [L=518]
Description: NAD/NADH kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-88  296.3   0.0    3.3e-88  295.7   0.0    1.2  1  NAD_kinase  ATP-NAD kinase


Domain annotation for each model (and alignments):
>> NAD_kinase  ATP-NAD kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  295.7   0.0   1.8e-92   3.3e-88       2     288 ..     154     476 ..     153     479 .. 0.89

  Alignments for each domain:
  == domain 1  score: 295.7 bits;  conditional E-value: 1.8e-92
                 EEEEESSCGGTCSHHHHHHHHHHHCT-..EEEEECCGGCCSSSTT-....-HHHHTTTT--...................................... CS
  NAD_kinase   2 vgivvnpikkeaieraeevarwLldalsrvlevtveeklgeslaea....aefrsevisvlkkvkttd............................... 65 
                 v+++  +   ++++ a++v++wLld+    +e   ++++g s   +      ++s+++s                                        
  EPX72660.1 154 VLLISSDG-SSSVNAAVQVTQWLLDN---FVESSAQQDFGSSSMDSqsrmTSSDSNDHS--------Gspppleknfspkspksqffiyleeklsllpe 240
                 77777777.6999*************...333344444433333220000222222333........123344555888888899************** PP

                 ...........EEECCC-TTTTTSSSEEEEEE-HHHHHHHHHHHHHCT-EEEEEESSS--SS-SEEGGGHHHHHHHHHHT-SEEEEEEEEEEEEEETTE CS
  NAD_kinase  66 ...........dtrkaleafadagvdliivvGGDGTaldvarllqkaeiPvlgvnaGvkgfltefepeaaaellekllegeirvekrevldavimrskg 153
                             + ++l++++++ +d++i++G+D+Tal++++l+q++++Pv++ + ++ gfl+++++++++e+l+ +++++++v++r++++++imr+ g
  EPX72660.1 241 fdsftpkenvrLWSAELCTQQPNVFDCVITIGDDSTALRASWLFQDVVPPVISYSIANPGFLSVLPINNYQETLDVIFRKGFTVNLRMRFQCSIMRYVG 339
                 *************************************************************************************************** PP

                 ......EEEEEEESSEEEEEESSSSS-EEEEEEETTEEEEEEEESEEEEE-TGGGGTHHHHTT--EE-TT---EEEEEESESSS----EEE-TT-EEEE CS
  NAD_kinase 154 eediadiviensvlnevviirgpgstlielelyvdtelleadqldglivstPtGstayslsaGgplisPgvlailivpicPhslssrpiVvssssklri 252
                 e+++++++++ svlne++i+rgp++++i+l+lyvd+ +++ +q+dg++vstPtGstays++aGg+l++P+++aili++icPhsls+rpi++++s +lri
  EPX72660.1 340 EKKTHICEGQFSVLNELLIDRGPNPFMIMLDLYVDNVYITCLQSDGVCVSTPTGSTAYSVAAGGSLCHPAIPAILISAICPHSLSFRPIILPDSITLRI 438
                 *************************************************************************************************** PP

                 EE-..SS--EEEEETTTEEEEE-TT-EEEEEEESSEEE CS
  NAD_kinase 253 rva..srseallaldGseelelspgdevrvtasdkkfk 288
                 +v+  +rs+a++a+dG++++el++gd+++v+as+++f 
  EPX72660.1 439 VVPldARSNAWCAFDGHHRVELGLGDYISVSASPFPFP 476
                 ***********************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (518 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       637  (0.035529); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.29s 00:00:00.96 Elapsed: 00:00:00.54
# Mc/sec: 2861.72
//
Query:       EPX72661.1  [L=423]
Description: transcription factor Rdp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.2e-05   23.0   1.3    7.2e-05   23.0   1.3    3.6  4  zf-C2H2    Zinc finger, C2H2 type
    0.00024   21.0   0.3    0.00067   19.6   0.3    1.8  1  zf-C2H2_6  C2H2-type zinc finger
  ------ inclusion threshold ------
      0.032   14.7   3.2        4.4    7.8   0.2    2.7  3  OrsD       Orsellinic acid/F9775 biosynthesis cluster protein
      0.063   14.2   0.7      0.063   14.2   0.7    3.5  3  zf-C2H2_4  C2H2-type zinc finger
       0.21   12.1   1.1        7.7    7.1   0.2    3.2  2  zf-H2C2_2  Zinc-finger double domain
       0.32   10.6   2.1         13    5.4   0.1    2.9  3  zf_UBZ     Ubiquitin-Binding Zinc Finger


Domain annotation for each model (and alignments):
>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   1.3   2.4e-08   7.2e-05       1      23 []      90     113 ..      90     113 .. 0.98
   2 ?   -3.2   0.0         5   1.5e+04      11      20 ..     146     155 ..     146     156 .. 0.81
   3 ?    0.3   0.4       0.4   1.2e+03       9      19 ..     268     278 ..     266     278 .. 0.89
   4 ?    0.4   0.3      0.38   1.1e+03       3      23 .]     382     402 ..     381     402 .. 0.63

  Alignments for each domain:
  == domain 1  score: 23.0 bits;  conditional E-value: 2.4e-08
                 EEETTTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                 y+C++C+++F  +s L++H rt H
  EPX72661.1  90 YRCDKCDMVFAKQSGLTNHKRTyH 113
                 9*********************99 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 5
                 SSHHHHHHHH CS
     zf-C2H2  11 krksnLkrHi 20 
                 +r+ n+ +H 
  EPX72661.1 146 RRPVNFASHA 155
                 5889999996 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 0.4
                 EESSHHHHHHH CS
     zf-C2H2   9 sFkrksnLkrH 19 
                 +F r+s++ +H
  EPX72661.1 268 PFARQSDYSAH 278
                 8*******999 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.38
                 ETTTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   3 CpdCgksFkrksnLkrHirt.H 23 
                 C+dC + F + s    H+r+ H
  EPX72661.1 382 CEDC-REFISLSAALDHRRSqH 402
                 5555.45557777777887777 PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.3   2.3e-07   0.00067       2      26 ..      90     114 ..      89     115 .. 0.95

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 2.3e-07
   zf-C2H2_6   2 heCsvCsksFpslqaLggHkksHrk 26 
                 ++C+ C+ +F ++  L+ Hk+++++
  EPX72661.1  90 YRCDKCDMVFAKQSGLTNHKRTYHQ 114
                 9*********************997 PP

>> OrsD  Orsellinic acid/F9775 biosynthesis cluster protein D
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.2    0.0015       4.4      69     114 .]      71     114 ..      58     114 .. 0.84
   2 ?   -3.2   0.0       3.7   1.1e+04      54      67 ..     252     265 ..     234     279 .. 0.52
   3 ?    6.8   0.0    0.0029       8.7       7      37 ..     375     405 ..     370     421 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0015
        OrsD  69 slpsaesepipgLpvy.eGyrCrakakCkyltrslktlrkHlqkkhg 114
                 ++p+++s  ip  p+  + yrC   +kC  + ++++ l +H ++ h+
  EPX72661.1  71 NPPKHPSTGIPPSPTAtTMYRC---DKCDMVFAKQSGLTNHKRTYHQ 114
                 45778888888888886789**...9*****************9996 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 3.7
        OrsD  54 slrqldelareaea 67 
                   ++l+++ +++++
  EPX72661.1 252 AAESLANVSQQQHN 265
                 33344444333333 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.0029
        OrsD   7 eeyrvliCreCkyavlpselerHLrkrhrql 37 
                 +++rv  C+ C+  ++ s++  H r++h+q 
  EPX72661.1 375 ANLRVAYCEDCREFISLSAALDHRRSQHSQS 405
                 6889*********************999886 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.7   2.1e-05     0.063       1      24 []      90     113 ..      90     113 .. 0.96
   2 ?   -0.7   0.6       1.2   3.6e+03       1      21 [.     136     156 ..     136     158 .. 0.77
   3 ?    4.7   0.3     0.023        70       2      24 .]     381     402 ..     381     402 .. 0.93

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.1e-05
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlkthH 24 
                 ++C+ C+ +F  +++L +H +t H
  EPX72661.1  90 YRCDKCDMVFAKQSGLTNHKRTYH 113
                 89*******************998 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 1.2
   zf-C2H2_4   1 fkCpiC.gksFsskkaLlrHlk 21 
                 f+C +C +++++++ ++ +H k
  EPX72661.1 136 FQC-VCgRQNWRRPVNFASHAK 156
                 678.786888888888888876 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.023
   zf-C2H2_4   2 kCpiCgksFsskkaLlrHlkthH 24 
                 +C+ C + F s +a l+H +++H
  EPX72661.1 381 YCEDC-REFISLSAALDHRRSQH 402
                 5999*.********99***9999 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.2    0.0026       7.7      13      25 ..      88     100 ..      74     101 .. 0.79
   2 ?    2.1   0.1       0.1     3e+02       1      13 [.     104     117 ..     104     138 .. 0.80

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0026
   zf-H2C2_2  13 kpyeCplCdkaFk 25 
                 + y C++Cd +F+
  EPX72661.1  88 TMYRCDKCDMVFA 100
                 45********997 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.1
   zf-H2C2_2   1 nLrrHirk.Htgek 13 
                 +L+ H r+ H +e+
  EPX72661.1 104 GLTNHKRTyHQPET 117
                 5999***77*9998 PP

>> zf_UBZ  Ubiquitin-Binding Zinc Finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.1    0.0045        13       2      14 ..      89     101 ..      88     109 .. 0.81
   2 ?   -1.8   0.0      0.79   2.4e+03      16      24 ..     175     183 ..     170     183 .. 0.80
   3 ?    3.8   0.1     0.014        43       5      20 ..     382     397 ..     380     398 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0045
      zf_UBZ   2 tylCerCgkeipe 14 
                 +y C++C+  +  
  EPX72661.1  89 MYRCDKCDMVFAK 101
                 79******99875 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.79
      zf_UBZ  16 elqEHeDwH 24 
                 +++ HeD H
  EPX72661.1 175 KVPPHEDLH 183
                 6788***99 PP

  == domain 3  score: 3.8 bits;  conditional E-value: 0.014
      zf_UBZ   5 CerCgkeipeselqEH 20 
                 Ce+C + i+ s+   H
  EPX72661.1 382 CEDCREFISLSAALDH 397
                 *********9976666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (423 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       841  (0.0469072); expected 358.6 (0.02)
Passed bias filter:                      526  (0.0293379); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.65u 0.33s 00:00:00.98 Elapsed: 00:00:00.53
# Mc/sec: 2421.66
//
Query:       EPX72662.1  [L=139]
Description: hypothetical protein SOCG_00425 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
      0.024   14.3   0.1      0.033   13.8   0.1    1.2  1  Hemolysin_N  Hemolytic toxin N terminal
      0.048   14.2   0.0      0.072   13.6   0.0    1.5  1  PH           PH domain


Domain annotation for each model (and alignments):
>> Hemolysin_N  Hemolytic toxin N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.1   3.6e-06     0.033      33      99 ..      17      81 ..       7      89 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 3.6e-06
                 XXXXXXXXXXXX-EEEEEGGGGG--------HH.HHHHHHTTS--EEEEE-TT--SHHHHHHHHHHHH CS
  Hemolysin_N 33 aiellselqdeqaikylnadvWlkeevalPala.qlrdrvlnqqkrllvdfsaiedesekaeakkrfr 99
                   e+ls+lq + +  +l  +   k++++ P+ a ql   +l++q r  +d+saie  s  ++a++ f 
   EPX72662.1 17 RQEILSRLQTQFQQAFLQLA---KKKAQYPLYAaQLPAALLSKQPRCSIDLSAIEPSSSTKDANASFA 81
                 56889999988888888654...67778898877***********************99999988775 PP

>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   8.1e-06     0.072      40      80 ..      54      92 ..      20     137 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 8.1e-06
                TESSEEEEEESTTEEEEEEECTTSSSSTSEEEEEESTSSST CS
          PH 40 kdkepkgsislsncevvevvatedpkrkfcfelriverngs 80
                 +k+p+ si+ls +e ++   t+d++  f f++r+++ +++
  EPX72662.1 54 LSKQPRCSIDLSAIEPSSS--TKDANASFAFQVRLQNHSPK 92
                5799*************99..99**********99965553 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       794  (0.0442858); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.29s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 887.68
//
Query:       EPX72663.1  [L=332]
Description: succinate-CoA ligase alpha subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-26   93.5   0.1    1.9e-26   92.7   0.1    1.4  1  Ligase_CoA     CoA-ligase
    3.5e-25   88.5   2.5    5.8e-25   87.8   0.6    2.1  2  CoA_binding    CoA binding domain
    5.2e-09   36.0   0.0    8.6e-09   35.3   0.0    1.4  1  Succ_CoA_lig   Succinyl-CoA ligase like flavodoxin domain
     0.0037   17.7   0.0       0.01   16.3   0.0    1.7  2  CoA_binding_2  CoA binding domain


Domain annotation for each model (and alignments):
>> Ligase_CoA  CoA-ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.7   0.1   4.3e-30   1.9e-26       1     151 [.     185     309 ..     185     311 .. 0.97

  Alignments for each domain:
  == domain 1  score: 92.7 bits;  conditional E-value: 4.3e-30
                 EESSHHHHHHHHHHHHHT..............T--BSEEEE-TSS--..........HHHHHHHHHHHHS-TT-SEEEEEEEESSSEHHHHHHHHHHHH CS
  Ligase_CoA   1 lvnGGtLayeamdlikealgdvasnkklknvlgseqheiidlGddaftkGrpHPmiDptkriealkklaadpevkvilldivlGygahedpaaellkai 99 
                 ++++GtL+yea++++++a              g +q+ +i++G+d f+         +t++i+alk +++dp++++i+l +++G g++e+ aae++k++
  EPX72663.1 185 VSRSGTLTYEAVNQTTQA--------------GLGQSLVIGIGGDPFP---------GTNFIDALKLFLNDPNTDGIILIGEIG-GSAEEDAAEYIKQA 259
                 689***************..............***************9.........***************************.************** PP

                 HHTT...--S-EEEEEECTTHH.....HHHHHHHTTTSSEEE-SSHHHHHHH CS
  Ligase_CoA 100 keakaegrelpvvarvaGteadpqelseqakaleeagveiasskaqalraak 151
                 + +k  ++++p+v+++aG++a++++++++a+a+  +g  +a++k +al+ a+
  EPX72663.1 260 NLTK--SNPKPIVSFIAGATAPKGRRMGHAGAIVAGGKGTAAAKFEALEGAG 309
                 ***9..**************************************99998876 PP

>> CoA_binding  CoA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.8   0.6   1.3e-28   5.8e-25       1      96 []      39     132 ..      39     132 .. 0.99
   2 ?   -0.2   0.1      0.38   1.7e+03       2      39 ..     178     215 ..     177     227 .. 0.76

  Alignments for each domain:
  == domain 1  score: 87.8 bits;  conditional E-value: 1.3e-28
                  CTTEEEEEETTTSHHHHHHHHHHHHHHECEEEEEEC-TTTTTCEETTEEEESCHHHHHHHCTTTEEEEES-HHHHHHHHHHHHHTT-SEEEEESST CS
  CoA_binding   1 dkdtkviviGagglgiaglyhfkeklkygikavfgvnprkvgtevlglpvyksvdeleektevdvavitvPaesaqeavdelveagikgiviiteg 96 
                  ++dtkv+ +G++g+  +g++h ++ l+yg+++v+g+np+k+g+++l+ pv+ +++e++ +t+++++ i+vP++ a+ a++e+++a+++++v+iteg
   EPX72663.1  39 NSDTKVVFQGFTGK--QGTFHAQQALQYGTNIVGGTNPKKAGSTHLDKPVFGNIAEAMRETKANASGIFVPPPLAAGAIEEAIAAEVPLVVAITEG 132
                  579***********..******************************************************************************97 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.38
                  TTEEEEEETTTSHHHHHHHHHHHHHHECEEEEEEC-TT CS
  CoA_binding   2 kdtkviviGagglgiaglyhfkeklkygikavfgvnpr 39 
                  k+++++++  +g+ + +++++  + + g + v+g++++
   EPX72663.1 178 KPGRIGIVSRSGTLTYEAVNQTTQAGLGQSLVIGIGGD 215
                  56777777778888888888888888888888888776 PP

>> Succ_CoA_lig  Succinyl-CoA ligase like flavodoxin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.0   1.9e-12   8.6e-09       1     108 [.     179     292 ..     179     319 .. 0.81

  Alignments for each domain:
  == domain 1  score: 35.3 bits;  conditional E-value: 1.9e-12
  Succ_CoA_lig   1 pGkialisqSGalalalldwaasrglgfskvvslGn..eadvdvadlleylaedpetkvillylEsird....grkflsaarraark.kpvvvlksG 90 
                   pG+i+++s SG+l  + ++++++ glg s v+ +G      +++ d l+ + +dp+t+ i+l  E  +     ++++++ a  ++ + kp+v + +G
    EPX72663.1 179 PGRIGIVSRSGTLTYEAVNQTTQAGLGQSLVIGIGGdpFPGTNFIDALKLFLNDPNTDGIILIGEIGGSaeedAAEYIKQANLTKSNpKPIVSFIAG 275
                   79*********************************9444689*********************99554322338999999999999*********** PP

  Succ_CoA_lig  91 rseagaraaashtgalag 108
                    ++ + r    h ga+++
    EPX72663.1 276 ATAPKGRRM-GHAGAIVA 292
                   977655543.56666543 PP

>> CoA_binding_2  CoA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   2.3e-06      0.01      18     114 ..      56     162 ..      49     164 .. 0.75
   2 ?   -3.1   0.0       2.4   1.1e+04      88     103 ..     246     261 ..     237     265 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 2.3e-06
                    HHHHHHHHHT--EE.EESSS-..SEETTEES----T......T--EEEE-S-HHHHGGGHHHHHHH--SEEEE-TT.---HHHHHHHHH....TT- CS
  CoA_binding_2  18 kvlryllehglpvv.pVnpke..eeilgekvyaslaed..pepvdlvdvftppeatpeivkealalgakavwlqpg.sedeeaaelaee....agi 103
                      +++ l+ g ++v   npk+  ++ l ++v+ ++ae+  +++  +  +f+pp  ++  ++ea+a++++ v+   + + + +++++ +     ++ 
     EPX72663.1  56 FHAQQALQYGTNIVgGTNPKKagSTHLDKPVFGNIAEAmrETKANASGIFVPPPLAAGAIEEAIAAEVPLVVAITEgIPQHDMLRVSDIlktqNKT 151
                    5566666666665523688888778888999999998458999999*****************999977777665536666665555445568999 PP

                    EEE.ES-HHHH CS
  CoA_binding_2 104 rvvgdrCilve 114
                    r+vg++C++++
     EPX72663.1 152 RLVGPNCPGII 162
                    9*******997 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 2.4
                    T---HHHHHHHHHTT- CS
  CoA_binding_2  88 gsedeeaaelaeeagi 103
                    gs +e+aae+ ++a++
     EPX72663.1 246 GSAEEDAAEYIKQANL 261
                    6788888998888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (332 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       380  (0.0211947); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.55u 0.29s 00:00:00.84 Elapsed: 00:00:00.48
# Mc/sec: 2091.00
//
Query:       EPX72664.1  [L=339]
Description: transcription factor TFIIB [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.7e-43  145.1   0.3    4.8e-24   84.2   0.2    2.3  2  TFIIB         Transcription factor TFIIB repeat
    4.9e-13   48.4   1.7    7.7e-13   47.7   1.7    1.3  1  TF_Zn_Ribbon  TFIIB zinc-binding
  ------ inclusion threshold ------
      0.021   14.7   0.0       0.12   12.3   0.0    2.1  2  HTH_5         Bacterial regulatory protein, arsR family
      0.048   13.4   0.1       0.11   12.3   0.1    1.5  1  Cyclin_N      Cyclin, N-terminal domain
      0.074   12.7   0.0       0.22   11.2   0.0    1.8  1  Sigma70_r4_2  Sigma-70, region 4
      0.078   12.4   1.1       0.12   11.8   0.0    1.9  2  zf-ribbon_3   zinc-ribbon domain
      0.082   12.9   0.1       0.12   12.4   0.1    1.3  1  RB_B          Retinoblastoma-associated protein B domain
      0.092   12.5   0.1        0.3   10.9   0.1    2.0  1  MerR          MerR family regulatory protein
       0.13   12.3   0.0        1.5    8.9   0.0    2.6  2  HTH_29        Winged helix-turn helix
       0.16   11.8   0.0         30    4.6   0.0    2.4  2  TrmB          Sugar-specific transcriptional regulator TrmB


Domain annotation for each model (and alignments):
>> TFIIB  Transcription factor TFIIB repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.2   0.2   2.6e-27   4.8e-24       1      71 []     125     195 ..     125     195 .. 0.98
   2 !   58.9   0.0   2.1e-19   3.8e-16       2      71 .]     237     306 ..     236     306 .. 0.98

  Alignments for each domain:
  == domain 1  score: 84.2 bits;  conditional E-value: 2.6e-27
                 HHHHHHHTT--HHHHHHHHHHHHHHTTSTTTTSGCTTHHHTTHHHHHHTTTTSS--HHHHHHHSS--SHHH CS
       TFIIB   1 ikrfadaleLpekVadaAkelaklaleekvlkGrspagiaAAclyiAcrkeevkrtqkeissvlqVsekti 71 
                 i +++da+ Lp+ +ad Ak+l+k++ + k lkG+s+++i+AAc+yiAcr+ +v rt+ ei+ +++V +k+i
  EPX72664.1 125 IGAMCDAISLPKVIADTAKQLYKRVDDHKALKGKSSQSIIAACIYIACRQGKVPRTFMEICTLTNVPKKEI 195
                 568*****************************************************************997 PP

  == domain 2  score: 58.9 bits;  conditional E-value: 2.1e-19
                 HHHHHHTT--HHHHHHHHHHHHHHTTSTTTTSGCTTHHHTTHHHHHHTTTTSS--HHHHHHHSS--SHHH CS
       TFIIB   2 krfadaleLpekVadaAkelaklaleekvlkGrspagiaAAclyiAcrkeevkrtqkeissvlqVsekti 71 
                  rf+++l Lp  V++aA ela++a +e++l+Grsp++iaA+ +y+ + + +  +t+keis+v+ Vs+ ti
  EPX72664.1 237 VRFCNRLLLPMVVQSAAAELARRAGQEGTLAGRSPISIAASGIYMISALMGYPKTPKEISEVTGVSDSTI 306
                 59*****************************************************************998 PP

>> TF_Zn_Ribbon  TFIIB zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.7   1.7   4.3e-16   7.7e-13       1      43 []      18      62 ..      18      62 .. 0.94

  Alignments for each domain:
  == domain 1  score: 47.7 bits;  conditional E-value: 4.3e-16
                  EEETTTTC.EE.CHEETSTTCEEESSSSBEEEECCCCCCCHHHHH CS
  TF_Zn_Ribbon  1 ykCPnCgs.tn.lveDpergelvCtdCGlVlednsidegpewref 43
                  ++C +C   +  lve++++g++vC++CGlVl d++id ++ewr+f
    EPX72664.1 18 MICSECREdPPnLVEEFSSGDTVCGSCGLVLGDRIIDTRSEWRTF 62
                  78*****98557********************************8 PP

>> HTH_5  Bacterial regulatory protein, arsR family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.92   1.6e+03      15      32 ..     178     195 ..     176     197 .. 0.85
   2 ?   12.3   0.0   6.6e-05      0.12       7      32 ..     281     306 ..     279     307 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.92
                 SEEHHHHHHHHTS-HHHH CS
       HTH_5  15 elcvcelaeelglsqstv 32 
                 ++++ e++  +++++  +
  EPX72664.1 178 PRTFMEICTLTNVPKKEI 195
                 78999*******998766 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 6.6e-05
                 HHHHHTTSSEEHHHHHHHHTS-HHHH CS
       HTH_5   7 ILklLaegelcvcelaeelglsqstv 32 
                 ++++L+  +++  e++e +g+s st+
  EPX72664.1 281 MISALMGYPKTPKEISEVTGVSDSTI 306
                 7899*********************9 PP

>> Cyclin_N  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   5.9e-05      0.11      41     102 ..     128     188 ..     112     208 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 5.9e-05
                 HHHHTT--TTHHHHHHHHHHHHHHHS---CCCHHHHHHHHHHHHHHHHSSS---HHHHHHHT CS
    Cyclin_N  41 vaekfkltpetlflavnyldRflskksvpkdklqlvgatcLllAaKveeisppkledlvyit 102
                 ++   +l + ++ +a +++ R+  +k ++ +  q + a+c+++A++  ++ p +  +++ +t
  EPX72664.1 128 MCDAISLPKVIADTAKQLYKRVDDHKALKGKSSQSIIAACIYIACRQGKV-PRTFMEICTLT 188
                 6777888888999999*****************************98666.66666666655 PP

>> Sigma70_r4_2  Sigma-70, region 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00012      0.22      28      47 ..     291     310 ..     290     312 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00012
                   -HHHHHHHHT--HHHHHHHH CS
  Sigma70_r4_2  28 sykEIAellgisegtVksrl 47 
                   + kEI+e++g+s++t++ ++
    EPX72664.1 291 TPKEISEVTGVSDSTIRIAY 310
                   569*************9776 PP

>> zf-ribbon_3  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.2       2.4   4.3e+03       5       8 ..      20      23 ..      18      24 .. 0.66
   2 ?   11.8   0.0   6.8e-05      0.12      13      26 .]      35      48 ..      32      48 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 2.4
  zf-ribbon_3  5 CPnC 8 
                 C++C
   EPX72664.1 20 CSEC 23
                 6666 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 6.8e-05
  zf-ribbon_3 13 ssddnvCpyCGtkl 26
                 ss+d+vC +CG +l
   EPX72664.1 35 SSGDTVCGSCGLVL 48
                 79*********987 PP

>> RB_B  Retinoblastoma-associated protein B domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   6.9e-05      0.12      11      96 ..     119     202 ..     109     248 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 6.9e-05
        RB_B  11 klaavrlrdLcerLklsselrekiwtlfehvlveetellkdRhlDqillcavYvvakvtkeelsFkeiikaYrkqpqasskvyrsv 96 
                  +a+  +  +c+ ++l + + + + +l ++  v++++ lk +    i+ +++Y+ ++  k  ++F ei +  +  +++  +vy++ 
  EPX72664.1 119 LTAYKEIGAMCDAISLPKVIADTAKQLYKR--VDDHKALKGKSSQSIIAACIYIACRQGKVPRTFMEICTLTNVPKKEIGRVYKTL 202
                 566777778888887777666555555554..4678899*****************************998888888888877765 PP

>> MerR  MerR family regulatory protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   0.00017       0.3       1      17 [.     291     307 ..     291     308 .. 0.95

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00017
                 EHHHHHHHHTTTHHHHH CS
        MerR   1 tIgevAeltGvsprtLR 17 
                 t +e++e tGvs +t+R
  EPX72664.1 291 TPKEISEVTGVSDSTIR 307
                 789*************9 PP

>> HTH_29  Winged helix-turn helix
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.69   1.2e+03      29      40 ..     198     209 ..     168     217 .. 0.56
   2 ?    8.9   0.0   0.00083       1.5      13      43 ..     287     319 ..     277     329 .. 0.79

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.69
      HTH_29  29 vyrwlkrfeegG 40 
                 vy++l r+ ++G
  EPX72664.1 198 VYKTLQRMLTEG 209
                 677777777776 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00083
      HTH_29  13 s...tvsqiAkllglsrrtvyrwlkrfeegGlaa 43 
                 +   t+++i +++g+s +t++ + k+ ++++ ++
  EPX72664.1 287 GypkTPKEISEVTGVSDSTIRIAYKLLHAER-QK 319
                 33479****************9988888887.34 PP

>> TrmB  Sugar-specific transcriptional regulator TrmB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.017        30      24      50 ..     180     209 ..     175     213 .. 0.72
   2 ?    4.6   0.0     0.017        31      22      39 ..     289     306 ..     283     315 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.017
                 HHCHHCCCTTSSCH...CHHHHHHHHHHCT CS
        TrmB  24 tadeiaeelgvprs...kvYevLrsLedkG 50 
                 t  ei   ++vp+    +vY++L++++  G
  EPX72664.1 180 TFMEICTLTNVPKKeigRVYKTLQRMLTEG 209
                 6667777777777423389*****999877 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.017
                 CCHHCHHCCCTTSSCHCH CS
        TrmB  22 patadeiaeelgvprskv 39 
                 p+t +ei+e +gv+ s++
  EPX72664.1 289 PKTPKEISEVTGVSDSTI 306
                 799*************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (339 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       693  (0.0386525); expected 358.6 (0.02)
Passed bias filter:                      620  (0.0345808); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 2301.73
//
Query:       EPX72665.1  [L=217]
Description: translation initiation factor eIF4E [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.2e-52  175.4   0.1    8.8e-52  175.1   0.1    1.1  1  IF4E      Eukaryotic initiation factor 4E


Domain annotation for each model (and alignments):
>> IF4E  Eukaryotic initiation factor 4E
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.1   0.1   4.9e-56   8.8e-52       1     159 []      38     197 ..      38     197 .. 0.95

  Alignments for each domain:
  == domain 1  score: 175.1 bits;  conditional E-value: 4.9e-56
                 EEEEEEEEEEE-TTT--SS-SGGG-EEEEEEEEHHHHHHHHHHS--GGGB-SSEEEEEEETT--SSTTSHHHHS-EEEEEEE--..---HHHHHHHHHH CS
        IF4E   1 pLkskWtlwfdsksksksenyeeslkkvatfstveeFwslynnlkkpsklkvksdyhlFkkgikPmWEdpankkGGkwvirlkk..kekldrlWeelll 97 
                 pL++ Wtlwf   ++    +++e  k+++tf++veeFw++ nn++++s+l+ ksdy++F++g++P WEd +nk+GGkw ++ k    + ld++W +++l
  EPX72665.1  38 PLSRPWTLWFLMPPT-PGLEWNELQKNIITFNSVEEFWGIHNNINAASSLPIKSDYSFFREGVRPEWEDIHNKNGGKWAFQNKGrgGNALDEMWLTTVL 135
                 7999******65555.9****************************************************************96643455********** PP

                 HHHTT-SS--.-SEEEEEEEE-SSEEEEEEEES-TT-HHHHHHHHHHHHHT--------EEE CS
        IF4E  98 aligeqleeeedeicGvvvsvRkkedrisiWtrdasdeekvekigeklkevlelpeekkley 159
                 ++ige+l++ ++e++Gvv+++Rk ++r+++Wt++++++e++ +ig+++k++l+lp+++++e+
  EPX72665.1 136 SAIGETLDPTGEEVMGVVINMRKGFYRLAVWTKTCTNREVLLDIGNRFKQILNLPRTETIEF 197
                 *********************************************************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       284  (0.0158403); expected 358.6 (0.02)
Passed bias filter:                      246  (0.0137208); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 1529.41
//
Query:       EPX72666.1  [L=220]
Description: methyltransferase implicated in translation [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.1e-87  292.2   0.0    2.4e-87  292.0   0.0    1.0  1  Methyltransf_PK  AdoMet dependent proline di-methyltransferas
    7.8e-09   36.1   0.0      2e-08   34.9   0.0    1.7  2  Methyltransf_25  Methyltransferase domain
    5.9e-06   26.8   0.0    1.2e-05   25.8   0.0    1.5  1  Methyltransf_11  Methyltransferase domain
  ------ inclusion threshold ------
      0.032   15.0   0.0       0.09   13.5   0.0    1.8  2  Methyltransf_12  Methyltransferase domain


Domain annotation for each model (and alignments):
>> Methyltransf_PK  AdoMet dependent proline di-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  292.0   0.0   5.4e-91   2.4e-87       2     217 ..       3     214 ..       2     215 .. 0.97

  Alignments for each domain:
  == domain 1  score: 292.0 bits;  conditional E-value: 5.4e-91
  Methyltransf_PK   2 eeevyekaiaYWesveadvdGvLGGyg..avskiDvkgsrkflkklkkeslpgkrevkvaldcGaGiGrvtknlLlkllskvDlvepvekflek 93 
                       +++y++ai+YW+++e++v+G+LGG+g  +++++D  +sr+fl++l ++   +k + +va+dcGaGiGrvt+ +Llk++s+vD+vepvekf+++
       EPX72666.1   3 PTKFYSDAIEYWNGIEPSVNGMLGGLGtgRIPQVDAIASRTFLRRLDYR--LKKIDALVAADCGAGIGRVTEFVLLKVASHVDIVEPVEKFVSQ 94 
                      5799**********************777********************..5699*************************************** PP

  Methyltransf_PK  94 akeelaeekkkvgkvyvvglqeftPeegrYdliWiqWcvghLtDedlvaflkrckkalkpnGlivvkenvakeekdelDkeDssvtrseaklkk 187
                      ak +l +   k ++++++glq++tPe++rY liW+qWc++hLt++dlva+l rc +al +nG+i++kenv++  +  +DkeDssvtr++++++k
       EPX72666.1  95 AKVHLQD---KPCSFICTGLQNWTPEKNRYGLIWNQWCLSHLTNDDLVAYLIRCSEALSENGVICIKENVSSFTE-SFDKEDSSVTRTDDSFRK 184
                      **99988...9*************************************************************996.****************** PP

  Methyltransf_PK 188 lfkkagLklvaeelqkglPkelypvkmyaL 217
                      +f+ a+L ++ae+lq+g+P+elypvkm+aL
       EPX72666.1 185 IFQMANLVIIAESLQHGFPDELYPVKMFAL 214
                      *****************************9 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.9   0.0   4.4e-12     2e-08       3      97 .]      62     153 ..      60     153 .. 0.95
   2 ?   -2.6   0.0       2.1   9.3e+03      62      76 ..     179     193 ..     164     207 .. 0.56

  Alignments for each domain:
  == domain 1  score: 34.9 bits;  conditional E-value: 4.4e-12
                      EET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTTTEEEEESBCCGBSSSTTTEEEEEEESTGGGSSHHHHHHHHHHHHHHEEEE CS
  Methyltransf_25   3 dlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeeglnvefvqgdaedlpfedgsfDlvvssgalhhlsdedlekalkeiarvLkpg 96 
                      d+G+G Gr+t+ ++ ++ +++v  v++ e+++ +a+ +++++   ++f++  ++++  e++++ l++ + +l+hl+++dl ++l +++++L ++
       EPX72666.1  62 DCGAGIGRVTEFVLLKV-ASHVDIVEPVEKFVSQAKVHLQDK--PCSFICTGLQNWTPEKNRYGLIWNQWCLSHLTNDDLVAYLIRCSEALSEN 152
                      99**********99998.7********************765..8***********************999*******************9998 PP

                      E CS
  Methyltransf_25  97 G 97 
                      G
       EPX72666.1 153 G 153
                      8 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 2.1
                      TTTEEEEEEESTGGG CS
  Methyltransf_25  62 dgsfDlvvssgalhh 76 
                      d+sf  ++ + +l +
       EPX72666.1 179 DDSFRKIFQMANLVI 193
                      445554444333433 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   0.0   2.7e-09   1.2e-05       2      96 .]      62     157 ..      61     157 .. 0.95

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 2.7e-09
                      EET-TTSHHHHHHHHTT.SEEEEEES-HHHHHHHHHHCCHHT-EEEETTEECCCTSS-TT-EEEEEEES-CCC-..CCHHHHHHHHHHHEEEEE CS
  Methyltransf_11   2 dvGcGtGrlaealakrg.arvvgvDlskemlklakekaseeglkvefvvadaeklpfednsfDlvvssevlhhv..edpekalkeiaRvLkpgG 92 
                      d+G+G Gr++e +  ++ ++v  v++ ++++ +ak + ++++  ++f++  +++   e+n + l++ +++l h+  +d+ ++l  +   L  +G
       EPX72666.1  62 DCGAGIGRVTEFVLLKVaSHVDIVEPVEKFVSQAKVHLQDKP--CSFICTGLQNWTPEKNRYGLIWNQWCLSHLtnDDLVAYLIRCSEALSENG 153
                      89***********95556***********************9..99********98899****************99***************** PP

                      EEEE CS
  Methyltransf_11  93 llvi 96 
                      +++i
       EPX72666.1 154 VICI 157
                      9875 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0     2e-05      0.09       2      99 .]      62     155 ..      61     155 .. 0.86
   2 ?   -2.9   0.0       2.6   1.2e+04      64      78 ..     184     200 ..     162     203 .. 0.58

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 2e-05
  Methyltransf_12   2 eiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvelealdlldldggssfDlvvasnvlhhl..kdirevldnirklL 93 
                      + G+G G++++ +l k   +++  v++ ++++ +ak +l+++   ++ +  l++   ++    + + l++   +l+hl  +d+ ++l ++ ++L
       EPX72666.1  62 DCGAGIGRVTEFVLLK-VASHVDIVEPVEKFVSQAKVHLQDKP-CSFICTGLQNWTPEK----NRYGLIWNQWCLSHLtnDDLVAYLIRCSEAL 149
                      67************99.999999*********88888877766.566666666666554....5****************************** PP

  Methyltransf_12  94 kpgGrl 99 
                      + +G++
       EPX72666.1 150 SENGVI 155
                      ****86 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2.6
  Methyltransf_12  64 g..ssfDlvvasnvlhh 78 
                      +  +   lv++++ l+h
       EPX72666.1 184 KifQMANLVIIAESLQH 200
                      13355666777776666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       382  (0.0213063); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.43u 0.28s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1519.99
//
Query:       EPX72667.1  [L=544]
Description: ubiquitin-protein ligase E3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      1e-26   93.1   0.0      2e-26   92.1   0.0    1.6  1  BRAP2          BRCA1-associated protein 2
      5e-19   68.4  11.7      5e-19   68.4  11.7    1.9  1  zf-UBP         Zn-finger in ubiquitin-hydrolases and other pr
    5.5e-08   33.0   9.7    5.5e-08   33.0   9.7    2.6  1  zf-RING_2      Ring finger domain
      1e-05   25.3   9.6      1e-05   25.3   9.6    2.0  1  zf-C3HC4_2     Zinc finger, C3HC4 type (RING finger)
      2e-05   24.8   7.2    7.5e-05   22.9   7.2    2.0  1  zf-rbx1        RING-H2 zinc finger domain
    0.00016   21.4   6.3    0.00016   21.4   6.3    2.1  2  zf-RING_11     RING-like zinc finger
    0.00053   19.8   9.1    0.00053   19.8   9.1    2.1  1  zf-C3HC4       Zinc finger, C3HC4 type (RING finger)
     0.0018   18.2   5.4     0.0064   16.5   5.4    2.0  1  zf-RING_UBOX   RING-type zinc-finger
      0.002   17.9   8.2      0.002   17.9   8.2    2.2  1  Prok-RING_4    Prokaryotic RING finger family 4
  ------ inclusion threshold ------
      0.014   15.6  13.4      0.014   15.6  13.4    1.8  2  ATG16          Autophagy protein 16 (ATG16)
      0.053   13.9  12.7       0.36   11.2   1.6    3.4  3  CC2-LZ         Leucine zipper of domain CC2 of NEMO, NF-kappa
       0.11   12.6  17.1       0.12   12.5   0.8    2.8  2  DHR10          Designed helical repeat protein 10 domain
       0.18   11.9  18.8        1.7    8.7   8.4    2.4  2  ADIP           Afadin- and alpha -actinin-Binding
       0.43   10.4   2.6        2.8    7.8   0.1    2.6  2  Rop-like       Rop-like
        0.6   10.2  10.6       0.12   12.5   4.2    2.7  2  TolA_bind_tri  TolA binding protein trimerisation
       0.62   11.0  13.5       0.89   10.5   4.0    2.7  2  CSN5_C         Cop9 signalosome subunit 5 C-terminal domain
       0.71    9.7   9.9        4.3    7.2   1.4    2.7  2  DivIC          Septum formation initiator
       0.73    9.9  17.0        1.7    8.7  17.0    1.6  1  UPF0242        Uncharacterised protein family (UPF0242) N-ter
        1.2    9.2   9.8       0.91    9.6   4.0    2.6  2  DUF1664        Protein of unknown function (DUF1664)
        1.7    8.7  19.5       0.49   10.5  12.0    3.3  5  BRE1           BRE1 E3 ubiquitin ligase
        1.9    9.2  12.4        2.5    8.8   1.2    3.1  3  SlyX           SlyX
        2.1    8.5  14.0       0.63   10.2   9.7    2.2  2  CENP-Q         CENP-Q, a CENPA-CAD centromere complex subunit
        2.7    7.3  11.2        4.9    6.4  11.2    1.5  1  DUF4407        Domain of unknown function (DUF4407)
        5.6    7.6  11.9         24    5.6   2.5    2.8  2  BST2           Bone marrow stromal antigen 2


Domain annotation for each model (and alignments):
>> BRAP2  BRCA1-associated protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.1   0.0   2.7e-29     2e-26       7      96 ..      86     176 ..      80     179 .. 0.94

  Alignments for each domain:
  == domain 1  score: 92.1 bits;  conditional E-value: 2.7e-29
       BRAP2   7 stllcilavPsylsladllkFvg.svlekvseiriirdgkenrymvLikfkdqesadeFykefngkkFssleeevChvvfvkevevtesae 96 
                   ll+ila+P y+s++d+l F+g   ++++s+ir++r++ +nr+ +L+kf dq+s  +F++e+ngk+Fs++e+e+Chvv+++ ++v+++++
  EPX72667.1  86 GLLLAILAIPLYMSPSDILGFLGeRNCSSISQIRLLRTKVPNRILALLKFIDQASVIRFFSEYNGKPFSQIEPETCHVVHIDGIQVDNPSS 176
                 5689******************98999**********************************************************988765 PP

>> zf-UBP  Zn-finger in ubiquitin-hydrolases and other protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.4  11.7   6.7e-22     5e-19       1      61 [.     262     321 ..     262     324 .. 0.96

  Alignments for each domain:
  == domain 1  score: 68.4 bits;  conditional E-value: 6.7e-22
                 -TTTH--.SSEEEETTT--EEE-TTTT-HHHHHHHHH---EEEETTT--EEETTTTEEBE- CS
      zf-UBP   1 CseCnsenknlWlCLkCghvgCgrksnghalkHyeetrHplavdlstlsvycyscddeved 61 
                 Cs C+   ++lW+CL Cg+vgCgr++  ha++Hy et+H++a++l++++v++y+ d +v++
  EPX72667.1 262 CSSCSCV-EDLWMCLICGTVGCGRYHDAHAKQHYVETNHCYAMNLESQRVWDYAGDRYVHR 321
                 *****66.9**************************************************96 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.0   9.7   7.4e-11   5.5e-08       2      44 .]     207     248 ..     206     248 .. 0.83

  Alignments for each domain:
  == domain 1  score: 33.0 bits;  conditional E-value: 7.4e-11
   zf-RING_2   2 eCpICleelssads.vlllpCgHvfhreClerwlrssstCPlCr 44 
                 +C++Cle+++s+ + +++  C+H+fh++Cl++w   +s+CP+Cr
  EPX72667.1 207 MCVVCLERMDSSVTgLITIACQHTFHCQCLQKWG--NSSCPVCR 248
                 8********88777434447*************8..455****9 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3   9.6   1.4e-08     1e-05       1      40 []     207     247 ..     207     247 .. 0.81

  Alignments for each domain:
  == domain 1  score: 25.3 bits;  conditional E-value: 1.4e-08
  zf-C3HC4_2   1 kCpiCldmlkd...psvvtpCgHvfCqkCilrsLeekneCPlC 40 
                 +C +Cl+++     ++ +++C+H+f+ +C++++   +++CP+C
  EPX72667.1 207 MCVVCLERMDSsvtGLITIACQHTFHCQCLQKW--GNSSCPVC 247
                 8****99998611144567*************9..566***** PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   7.2     1e-07   7.5e-05      14      55 .]     208     248 ..     204     248 .. 0.77

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 1e-07
     zf-rbx1  14 cieckapgdee.cpvvlGeCgHaFHlhCiskWlktrkvCPlcr 55 
                 c+ c +  d++ + +++ +C+H+FH +C++kW ++  +CP+cr
  EPX72667.1 208 CVVCLERMDSSvTGLITIACQHTFHCQCLQKWGNS--SCPVCR 248
                 6666666666644555669*************765..9****8 PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   6.3   2.1e-07   0.00016       2      29 .]     208     236 ..     208     236 .. 0.90
   2 ?   -2.7   0.1       6.8   5.1e+03       2      20 ..     244     262 ..     244     263 .. 0.70

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 2.1e-07
  zf-RING_11   2 CsICLeefkpgq.alfilpCsHtFHfkCI 29 
                 C++CLe +  +   l++  C HtFH++C+
  EPX72667.1 208 CVVCLERMDSSVtGLITIACQHTFHCQCL 236
                 *********877478899**********6 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 6.8
  zf-RING_11   2 CsICLeefkpgqalfilpC 20 
                 C +C  + k++  ++  +C
  EPX72667.1 244 CPVCRYTQKEDTHRYSGKC 262
                 8999888777776666666 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   9.1   7.1e-07   0.00053       1      41 []     208     247 ..     208     247 .. 0.96

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 7.1e-07
                 -TTT-S--SS-E....E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepn...elleCkHsfCskCirkilksrkkvkCPlC 41 
                 C +Cle +   +    ++ C+H+f+++C++k+ +     +CP+C
  EPX72667.1 208 CVVCLERMDSSVtglITIACQHTFHCQCLQKWGN----SSCPVC 247
                 99*******999999*******************....78***9 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   5.4   8.5e-06    0.0064       1      39 []     208     245 ..     208     263 .. 0.74

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 8.5e-06
  zf-RING_UBOX   1 CpIClelftdP...lvl.pCGHtFCreClwelskslegafkCP 39 
                   C +Cle ++     l++  C+HtF+ +Cl     ++ g+ +CP
    EPX72667.1 208 CVVCLERMDSSvtgLITiACQHTFHCQCL-----QKWGNSSCP 245
                   99******94434655447**********.....333444444 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   8.2   2.7e-06     0.002       1      39 [.     208     250 ..     208     256 .. 0.85

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 2.7e-06
  Prok-RING_4   1 CvlCgeq....ekkailepCgHlvCkeCfdskdlssCPlCqrr 39 
                  Cv+C e+     +  i + C+H +  +C++++ +ssCP+C+  
   EPX72667.1 208 CVVCLERmdssVTGLITIACQHTFHCQCLQKWGNSSCPVCRYT 250
                  999999977767788999*****9889*************965 PP

>> ATG16  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.6  13.4   1.9e-05     0.014      25     138 ..     378     491 ..     360     504 .. 0.75
   2 ?   -2.0   0.3       4.9   3.6e+03      51      64 ..     519     532 ..     491     543 .. 0.44

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 1.9e-05
       ATG16  25 nrLldrtsaleaenaklekaaasakssksskksakekeasasq....snskqsakiqsleqklaqlreelaelyksrgelaqrllelneelqkleeklk 119
                 ++L   t++l++ n+ +  +++ a++    +++a+ +++s+ +    + +k+++kiq+l++++ q++ + +e    ++ l  r+++l++ + k++e++ 
  EPX72667.1 378 SQLSSMTEKLNRANEDITLKSKIATA----SSNANNELRSRIDiaesNLKKKNDKIQKLSTEVMQWKRDYSEEKSINENLLVRIQSLETRHNKKNEEIV 472
                 34444455555555544222222221....23344444444447887778999********************************************** PP

       ATG16 120 edeerlaeleaeraaletk 138
                 ++++++++l+++ +++   
  EPX72667.1 473 SMQQQINDLSEQLRDVMFT 491
                 **********999887655 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 4.9
       ATG16  51 sksskksakekeas 64 
                 ++ss++s+++k+++
  EPX72667.1 519 TTSSSSSKTRKKKK 532
                 11111222222222 PP

>> CC2-LZ  Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.1      0.81   6.1e+02       7      34 ..     371     398 ..     365     406 .. 0.78
   2 ?   11.2   1.6   0.00048      0.36      12      50 ..     404     442 ..     395     447 .. 0.85
   3 ?    6.9   1.9     0.011       7.9      16      55 ..     450     489 ..     441     499 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.81
      CC2-LZ   7 eaekvkkeeieeLkaqlqaaeealaakq 34 
                   +  +++++++++++l+ a+e ++ k+
  EPX72667.1 371 SQRIFYESQLSSMTEKLNRANEDITLKS 398
                 4555678999999999999999888765 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00048
      CC2-LZ  12 kkeeieeLkaqlqaaeealaakqeeidelkeeikkkeee 50 
                 + +  +eL  +++ ae +l++k+++i++l +e+ + + +
  EPX72667.1 404 SSNANNELRSRIDIAESNLKKKNDKIQKLSTEVMQWKRD 442
                 4667799*************************9998765 PP

  == domain 3  score: 6.9 bits;  conditional E-value: 0.011
      CC2-LZ  16 ieeLkaqlqaaeealaakqeeidelkeeikkkeeeletis 55 
                  e+L  ++q+ e   ++k+eei  ++++i+  +e+l+ + 
  EPX72667.1 450 NENLLVRIQSLETRHNKKNEEIVSMQQQINDLSEQLRDVM 489
                 468999999999999**************99999999664 PP

>> DHR10  Designed helical repeat protein 10 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.8   0.00015      0.12      58     108 ..     351     401 ..     329     406 .. 0.80
   2 ?    3.6  10.0      0.09        67      29     110 ..     405     487 ..     399     494 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00015
       DHR10  58 klkelrdaleekeielrelerkeerlqrqlenaeeklerlreqaeekreaa 108
                    + +  le  +i +++le+++   + ql++++ekl+r+ e+   k + a
  EPX72667.1 351 LKVREKMGLEYTQILTSQLESQRIFYESQLSSMTEKLNRANEDITLKSKIA 401
                 5556778899999*****************************998887765 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.09
       DHR10  29 qvvekdlrscikllee.ieaelakleeakkklkelrdaleekeielrelerkeerlqrqlenaeeklerlreqaeekreaaka 110
                 +++ ++lrs i+++e  ++++  k ++ + ++ + +  ++e +   + l  +++ l+ + ++++e++  +++q ++  e+ + 
  EPX72667.1 405 SNANNELRSRIDIAESnLKKKNDKIQKLSTEVMQWKRDYSEEKSINENLLVRIQSLETRHNKKNEEIVSMQQQINDLSEQLRD 487
                 678999*******9988999*****************************************************9998888765 PP

>> ADIP  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   8.4    0.0023       1.7      70     136 ..     378     447 ..     359     454 .. 0.83
   2 ?    7.7   3.7    0.0046       3.4      56      95 ..     458     497 ..     447     510 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0023
        ADIP  70 erlqskierlktqleq..lerela.lvqakerqlekklktleqklknekeelqrlknalqqiktqyahel 136
                 ++l+s +e+l + +e+  l++++a ++ ++ ++l+ ++  +e+ lk++ +++q+l + + q k  y+ e+
  EPX72667.1 378 SQLSSMTEKLNRANEDitLKSKIAtASSNANNELRSRIDIAESNLKKKNDKIQKLSTEVMQWKRDYSEEK 447
                 466777777777777633567777799999**********************************999885 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.0046
        ADIP  56 eslnetirkleaeierlqskierlktqleqlerelalvqa 95 
                 +sl+++++k++ ei ++q++i+ l++ql +    ++++q+
  EPX72667.1 458 QSLETRHNKKNEEIVSMQQQINDLSEQLRDVMFTISASQE 497
                 799999*********************9998877777665 PP

>> Rop-like  Rop-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.2      0.33   2.4e+02       3      23 ..     422     442 ..     416     445 .. 0.85
   2 ?    7.8   0.1    0.0037       2.8       3      31 ..     457     485 ..     456     489 .. 0.94

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.33
                 HHHHHHHHHHHHHHHHHHHHH CS
    Rop-like   3 ieeLkkevkKlnskAtqakmd 23 
                 +++ + +++Kl+++ +q+k d
  EPX72667.1 422 LKKKNDKIQKLSTEVMQWKRD 442
                 5666789***********976 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0037
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHT CS
    Rop-like   3 ieeLkkevkKlnskAtqakmdLHDLaEdL 31 
                 i+ L+++  K+n + ++++ ++ DL+E+L
  EPX72667.1 457 IQSLETRHNKKNEEIVSMQQQINDLSEQL 485
                 7899***********************98 PP

>> TolA_bind_tri  TolA binding protein trimerisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.3       1.1   8.2e+02      15      51 ..     403     439 ..     376     445 .. 0.68
   2 ?   12.5   4.2   0.00016      0.12       4      36 ..     455     487 ..     452     489 .. 0.93

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 1.1
  TolA_bind_tri  15 arsqlllelqqqlealqqelreLRGqiEelqyqleql 51 
                    a+s+++ el ++++  ++ l++ + +i++l+ ++ q 
     EPX72667.1 403 ASSNANNELRSRIDIAESNLKKKNDKIQKLSTEVMQW 439
                    5556666666666666666666666666666555554 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 0.00016
  TolA_bind_tri   4 drvarLErilearsqlllelqqqlealqqelre 36 
                     r+++LE   +++++ ++ +qqq+++l+++lr+
     EPX72667.1 455 VRIQSLETRHNKKNEEIVSMQQQINDLSEQLRD 487
                    69***************************9986 PP

>> CSN5_C  Cop9 signalosome subunit 5 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   4.0    0.0012      0.89       3      74 ..     367     436 ..     366     444 .. 0.76
   2 ?    5.2   2.0     0.054        40      13      64 ..     475     540 ..     473     544 .] 0.64

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.0012
      CSN5_C   3 spLltNrdYatkqisDLaeKlekaessvsrsrsaagtlseeaseaeekkkkkkedsqLakvvkdstkiasea 74 
                 s L ++r +  +q+s ++eKl++a++ ++ ++ +++t+s++a ++e +++ +  +s+L+k     +k+++e 
  EPX72667.1 367 SQLESQRIFYESQLSSMTEKLNRANEDITLKS-KIATASSNA-NNELRSRIDIAESNLKKKNDKIQKLSTEV 436
                 78999***********************8888.565666544.44455556667777777777777777765 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.054
      CSN5_C  13 tkqisDLaeKlekaessvsrsrsaagtlseeaseaeekkk................kkkedsqLakvv 64 
                 ++qi+DL+e l+++  ++s s++ ++    e+ ++++                   kkk+++++a + 
  EPX72667.1 475 QQQINDLSEQLRDVMFTISASQELQKVSDPEDIKNAT--VvvpnatttsssssktrKKKKKKPMASIS 540
                 68*************9999999777444443332222..13355555555555555777777776665 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   1.7      0.01       7.7      18      54 ..     407     443 ..     401     448 .. 0.86
   2 ?    7.2   1.4    0.0058       4.3      14      49 ..     452     487 ..     449     490 .. 0.87

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.01
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-XXXX CS
       DivIC  18 aykqlkqeiaalqaelaklkaeneeLeaevkdLksde 54 
                 a  +l++ i+  + +l+k+++++++L  ev ++k d+
  EPX72667.1 407 ANNELRSRIDIAESNLKKKNDKIQKLSTEVMQWKRDY 443
                 6788999999***********************8554 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0058
                 XXXXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC CS
       DivIC  14 kgllaykqlkqeiaalqaelaklkaeneeLeaevkd 49 
                 + l+++++l+   +++++e++++++++++L ++++d
  EPX72667.1 452 NLLVRIQSLETRHNKKNEEIVSMQQQINDLSEQLRD 487
                 668899999999999999999999999999999887 PP

>> UPF0242  Uncharacterised protein family (UPF0242) N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7  17.0    0.0022       1.7      66     186 ..     372     492 ..     348     496 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0022
     UPF0242  66 ekskleekeaklteld....eglktkeealeelqeeeeeLkeeldakeeelerlkeenqqLqekleaiaedfeelkleleeqLaekqellqeyqetiee 160
                 +  + e++ + +te+     e+++ k +    + + ++eL+ ++d  e++l++ + + q+L+ +  + ++d++e k   e+ L +    +q ++   ++
  EPX72667.1 372 QRIFYESQLSSMTEKLnranEDITLKSKIATASSNANNELRSRIDIAESNLKKKNDKIQKLSTEVMQWKRDYSEEKSINENLLVR----IQSLETRHNK 466
                 444555555555554444449999999988999999**************************************98877777754....6667777788 PP

     UPF0242 161 qrsvlekrqdqieqLeskVrDlnyEi 186
                 + +++ + q+qi++L  + rD ++ i
  EPX72667.1 467 KNEEIVSMQQQINDLSEQLRDVMFTI 492
                 88999999**************9866 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   4.0    0.0012      0.91      54     116 ..     401     463 ..     378     466 .. 0.86
   2 ?    5.9   1.5     0.016        12      61     104 ..     450     493 ..     443     505 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.0012
     DUF1664  54 seslaatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeaveglesk 116
                  ++ +++ ++L srid  +++l++ ++ +++++ ev++ ++d se ++  e++   +++le++
  EPX72667.1 401 ATASSNANNELRSRIDIAESNLKKKNDKIQKLSTEVMQWKRDYSEEKSINENLLVRIQSLETR 463
                 455567899*************************************************99986 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.016
     DUF1664  61 krhLssridrvdkkldeqkeiskeikeevtevredlseigedve 104
                  ++L  ri++++++ ++ +e + ++++++++++e+l+++   ++
  EPX72667.1 450 NENLLVRIQSLETRHNKKNEEIVSMQQQINDLSEQLRDVMFTIS 493
                 578999****************************9999877665 PP

>> BRE1  BRE1 E3 ubiquitin ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       7.2   5.4e+03       1      13 [.      71      83 ..      71      84 .. 0.88
   2 ?   -2.7   0.0       8.4   6.3e+03      29      50 ..     327     348 ..     324     355 .. 0.71
   3 ?    5.0  10.1     0.035        26      24      80 ..     378     434 ..     366     463 .. 0.86
   4 ?   10.5  12.0   0.00065      0.49       9      91 ..     405     487 ..     401     489 .. 0.95
   5 ?    6.9   0.5    0.0085       6.4       2      32 ..     468     498 ..     467     503 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 7.2
        BRE1  1 lqkELvklekafe 13
                l+ E+++++ +f+
  EPX72667.1 71 LYREIPDMSSEFR 83
                789*******997 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 8.4
        BRE1  29 leekklrleaekakadqkyfaa 50 
                 l  k+  l++ek+   +  f+ 
  EPX72667.1 327 LDGKVVELSNEKSTDGNSAFDQ 348
                 6667888888888777777765 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.035
        BRE1  24 keltileekklrleaekakadqkyfaamrskdalenelkkLnkllsKsselieqLke 80 
                 ++l++++ek++r++ +++   +   a  ++ + l+  +    ++l+K++++i++L  
  EPX72667.1 378 SQLSSMTEKLNRANEDITLKSKIATASSNANNELRSRIDIAESNLKKKNDKIQKLST 434
                 6899**************************************************987 PP

  == domain 4  score: 10.5 bits;  conditional E-value: 0.00065
        BRE1   9 ekafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdalenelkkLnkllsKsselieqLkelekefvrklke 91 
                 ++a +el++ ++   ++l+   +k+++l++e  + ++ y + +   ++l   ++ L + ++K++e i  +++  +++ ++l +
  EPX72667.1 405 SNANNELRSRIDIAESNLKKKNDKIQKLSTEVMQWKRDYSEEKSINENLLVRIQSLETRHNKKNEEIVSMQQQINDLSEQLRD 487
                 7899********************************************************************99999999875 PP

  == domain 5  score: 6.9 bits;  conditional E-value: 0.0085
        BRE1   2 qkELvklekafeelseqlskkvkeltileek 32 
                 + E+v++++++++lseql++  + +++ +e 
  EPX72667.1 468 NEEIVSMQQQINDLSEQLRDVMFTISASQEL 498
                 68******************99999998886 PP

>> SlyX  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1         3   2.2e+03       8      33 ..     369     394 ..     359     408 .. 0.60
   2 ?    7.5   1.4    0.0085       6.3       2      57 ..     412     467 ..     411     470 .. 0.91
   3 ?    8.8   1.2    0.0034       2.5      23      57 ..     468     502 ..     465     508 .. 0.80

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 3
                 HHHHHHHHHHHHHHHHHHHHHHHHHH CS
        SlyX   8 LEiklafqedtieeLndvvaeqqqqi 33 
                 LE++  f e ++ ++ + + + +++i
  EPX72667.1 369 LESQRIFYESQLSSMTEKLNRANEDI 394
                 45555555555544444444444444 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0085
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-XXXXXXXXXX CS
        SlyX   2 eerleeLEiklafqedtieeLndvvaeqqqqidrlqrqlrllaerlkeleessgas 57 
                  +r++  E+ l    d i++L+ +v++  ++ ++ +   + l  r+++le++++++
  EPX72667.1 412 RSRIDIAESNLKKKNDKIQKLSTEVMQWKRDYSEEKSINENLLVRIQSLETRHNKK 467
                 5799999*******************************************998754 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.0034
                 HHHHHHHHHHHHHHHHHHHHHHHT-XXXXXXXXXX CS
        SlyX  23 ndvvaeqqqqidrlqrqlrllaerlkeleessgas 57 
                 n++++  qqqi  l +qlr ++  +++ +e ++ s
  EPX72667.1 468 NEEIVSMQQQINDLSEQLRDVMFTISASQELQKVS 502
                 89999999999999999999998888777776644 PP

>> CENP-Q  CENP-Q, a CENPA-CAD centromere complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.2         2   1.5e+03      87     162 ..     316     389 ..     304     394 .. 0.53
   2 ?   10.2   9.7   0.00084      0.63      42     157 ..     402     502 ..     386     504 .. 0.80

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 2
      CENP-Q  87 lkkehvllqesdseelslleassdevlgeasgtvfsdlepeldeellpllqqLgshLesmrgnl.aqlegllpaler 162
                  +  h llq++ +++  +l+ +++  + + s  ++s+l+   ++  l+  q L+s+Les r    +ql ++ ++l r
  EPX72667.1 316 DRYVHRLLQSELDGKVVELSNEKS--TDGNSAFDQSNLKV-REKMGLEYTQILTSQLESQRIFYeSQLSSMTEKLNR 389
                 555677777544444444444433..33333344444443.355566667777777777665442456666666655 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00084
      CENP-Q  42 spelhslelLeaeiekeeralerdyeaLreLeknakaeare.rkeklkkehvllqesdseelslleassdevlgeasgtvfsdlepeldeellpllqqL 139
                 +++  + ++L++ i+ +e  l++   ++++L +++  ++r   +ek  +e  l+++++ e++++++ ++                 ++++++++l++qL
  EPX72667.1 402 TASSNANNELRSRIDIAESNLKKKNDKIQKLSTEVMQWKRDySEEKSINENLLVRIQSLETRHNKKNEEI---------------VSMQQQINDLSEQL 485
                 56678899*********************************88889999888888664444444444443...............35689999999999 PP

      CENP-Q 140 gshLesmrgnlaqlegll 157
                 ++ + ++ + ++ l++++
  EPX72667.1 486 RDVMFTI-SASQELQKVS 502
                 9999988.6677776665 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4  11.2    0.0066       4.9     118     221 ..     398     507 ..     321     542 .. 0.70

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0066
     DUF4407 118 eeakelkeqlaaaltaelaeleaqiaalqaeidaaearldalraeaqkeldgtkgtgttgvaGkgpaakekkaqldaaqaelaelkakld.......at 209
                 +++++++++ +++l+++++ +e+++++ + +i+++++++ + ++++ +e + +  +   +++  +++  +k++++   q+++++l+++l+       a+
  EPX72667.1 398 SKIATASSNANNELRSRIDIAESNLKKKNDKIQKLSTEVMQWKRDYSEEKSINE-NLLVRIQSLETRHNKKNEEIVSMQQQINDLSEQLRdvmftisAS 495
                 333444444445588888888888888888888888888888888888888765.33344566666677777777777777777777777777777755 PP

     DUF4407 210 arlaalraelae 221
                 ++l++  +  + 
  EPX72667.1 496 QELQKVSDPEDI 507
                 555555544444 PP

>> BST2  Bone marrow stromal antigen 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   3.5     0.041        31      22      80 ..     383     441 ..     375     452 .. 0.87
   2 ?    5.6   2.5     0.032        24      46      85 ..     449     488 ..     437     494 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.041
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        BST2  22 LerqLtqaqeslreaeaqaatcnqtvvtLkasLekekaqsqkqqakvqelqgeikkLnq 80 
                 + ++L++a+e +  + + a++ ++   +L++ ++  +++ +k++ k+q+l  e+ + + 
  EPX72667.1 383 MTEKLNRANEDITLKSKIATASSNANNELRSRIDIAESNLKKKNDKIQKLSTEVMQWKR 441
                 5689999*99999999999999999999***********99*********999987765 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.032
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        BST2  46 tvvtLkasLekekaqsqkqqakvqelqgeikkLnqkLqda 85 
                 + ++L   ++  +++++k+++++  +q++i++L ++L+d 
  EPX72667.1 449 INENLLVRIQSLETRHNKKNEEIVSMQQQINDLSEQLRDV 488
                 5567777778888999999999***************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (544 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2054  (0.114563); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        73  (0.00407162); expected 17.9 (0.001)
Passed Fwd filter:                        30  (0.00167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              24  [number of targets reported over threshold]
# CPU time: 0.71u 0.27s 00:00:00.98 Elapsed: 00:00:00.47
# Mc/sec: 3482.15
//
Query:       EPX72668.1  [L=192]
Description: hypothetical protein SOCG_00431 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-07   31.4   1.5    3.5e-07   30.8   1.5    1.3  1  ING       Inhibitor of growth proteins N-terminal histone-bin
  ------ inclusion threshold ------
       0.02   15.1   0.2      0.036   14.3   0.2    1.3  1  Flu_M1_C  Influenza Matrix protein (M1) C-terminal domain
      0.056   13.7   4.5       0.16   12.2   0.2    2.1  2  LNP1      Leukemia NUP98 fusion partner 1


Domain annotation for each model (and alignments):
>> ING  Inhibitor of growth proteins N-terminal histone-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   1.5   5.8e-11   3.5e-07       4     100 ..      16     111 ..      13     112 .. 0.96

  Alignments for each domain:
  == domain 1  score: 30.8 bits;  conditional E-value: 5.8e-11
                 HHHTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS..S-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTXX CS
         ING   4 dyldsvenLPlelqrnltelreiDakvqellkeidskiekflkngslqknekeeelsriqeelkeaqelldeKiqlaqqaldlvdkhlrrLdqdlek 100
                 ++ d +++ P++l+  +++++ ++ k++e +  +d +++k + n++ ++ne+++ +++i e +++   +l++K ++++++  + +++l rL++ ++ 
  EPX72668.1  16 ELADVLDATPSDLSSDFSKIHCLEGKIKEMQMTLDASVDKIM-NSNATPNERSSMIQKIVELVDKNSIFLRKKAHISMHTEAISKQNLLRLQACFQA 111
                 678999************************************.************************************************999875 PP

>> Flu_M1_C  Influenza Matrix protein (M1) C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.2     6e-06     0.036      18      88 ..      43     113 ..      37     119 .. 0.91

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 6e-06
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
    Flu_M1_C  18 renrmvlasttakameqmagssekaeevqklaeelrqnvqvlrslGasqksseGlkkdllevlkayqkrmG 88 
                 +e++m l ++  k m+  a  +e++  +qk+ e + +n   lr        +e + k  l  l+a  + m 
  EPX72668.1  43 KEMQMTLDASVDKIMNSNATPNERSSMIQKIVELVDKNSIFLRKKAHISMHTEAISKQNLLRLQACFQAME 113
                 7*************************************99***9999999999999999999999877775 PP

>> LNP1  Leukemia NUP98 fusion partner 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.2   2.6e-05      0.16      86     141 ..      44     100 ..      28     114 .. 0.85
   2 ?    3.3   0.6     0.014        85     149     168 ..     138     157 ..     123     189 .. 0.50

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2.6e-05
        LNP1  86 hkrasrksSadssfkepleskkRshsiqefsesfeqq.Lclrtkrsvslepesrker 141
                 +++ +   S+d  ++++ ++++Rs+ iq++ e  +++ + lr+k  +s++ e+  ++
  EPX72668.1  44 EMQMTLDASVDKIMNSNATPNERSSMIQKIVELVDKNsIFLRKKAHISMHTEAISKQ 100
                 4666667899************************986377899999***99986654 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.014
        LNP1 149 lesrshkkveekreskkeek 168
                 + +rs k+ + k  s +e++
  EPX72668.1 138 VPTRSSKRRQGKDASSRETN 157
                 22222222222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1237  (0.0689944); expected 358.6 (0.02)
Passed bias filter:                      522  (0.0291148); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.44
# Mc/sec: 1319.89
//
Query:       EPX72669.1  [L=534]
Description: transcription factor TFIIH complex subunit Tfb1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.7e-20   72.1  12.0    6.8e-11   42.0   0.1    4.0  6  BSD          BSD domain
    2.2e-16   60.0   0.1    7.6e-16   58.2   0.0    1.9  2  PH_TFIIH     TFIIH p62 subunit, N-terminal domain
  ------ inclusion threshold ------
      0.021   15.0   0.0       0.34   11.2   0.0    2.3  2  dbPDZ_assoc  Unstructured region between two PDZ domains on D


Domain annotation for each model (and alignments):
>> BSD  BSD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       1.3     8e+03       8      20 ..      88     101 ..      86     105 .. 0.78
   2 !   36.7   0.1   5.1e-13     3e-09       9      58 .]     124     174 ..     118     174 .. 0.92
   3 !   42.0   0.1   1.1e-14   6.8e-11       2      54 ..     191     242 ..     190     246 .. 0.92
   4 ?   -2.3   0.1      0.79   4.7e+03       6      36 ..     401     442 ..     397     446 .. 0.50
   5 ?   -2.8   0.1       1.1   6.5e+03      39      44 ..     458     463 ..     452     466 .. 0.81
   6 ?   -3.6   0.0         2   1.2e+04      11      20 ..     476     485 ..     473     494 .. 0.76

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.3
         BSD   8 d.kteeiaqsllke 20 
                 + +t+e+++++ ++
  EPX72669.1  88 EmITAELQKAITRQ 101
                 558999*9999775 PP

  == domain 2  score: 36.7 bits;  conditional E-value: 5.1e-13
         BSD   9 kteeiaqsllkedpeLrklynel.VPskvseeqFWsrYfyllrahaieeeq 58 
                  ++++++sll+ + e+  +++e+ +  ++s+eqFWs++ +llraha e +q
  EPX72669.1 124 EDIDLQESLLTNNGEMFHTFKEAvMKGHLSNEQFWSTRLHLLRAHAVERSQ 174
                 689********************8899*******************99987 PP

  == domain 3  score: 42.0 bits;  conditional E-value: 1.1e-14
         BSD   2 dnkfkldkteeiaqsllkedpeLrklynelVPskvseeqFWsrYfyllrahai 54 
                 dn+ k+++t ++++++++++p+Lrk+y++ VP  + e +FWsr+f +++ ++ 
  EPX72669.1 191 DNQMKVSLTRQQIHDMFEQHPQLRKVYDKHVPP-LAEGEFWSRFFLSKLCKKF 242
                 899******************************.************9988775 PP

  == domain 4  score: -2.3 bits;  conditional E-value: 0.79
         BSD   6 kld.kteeiaqsllkedpeLrklynel...........VPskv 36 
                 +ld ++ ++ ++ +    +L  ++ e            VP+ +
  EPX72669.1 401 ELDnTDRDVNALAEA-AQQLTHAMREKhefethgtdmnVPKDI 442
                 566344444444444.555555555433555555555566655 PP

  == domain 5  score: -2.8 bits;  conditional E-value: 1.1
         BSD  39 eqFWsr 44 
                  qFWs 
  EPX72669.1 458 HQFWSA 463
                 59**95 PP

  == domain 6  score: -3.6 bits;  conditional E-value: 2
         BSD  11 eeiaqsllke 20 
                 + ++q+ll++
  EPX72669.1 476 APLQQALLNS 485
                 6789999985 PP

>> PH_TFIIH  TFIIH p62 subunit, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.2   0.0   1.3e-19   7.6e-16       2      87 .]      11      95 ..      10      95 .. 0.93
   2 ?   -2.2   0.0      0.93   5.6e+03      45      59 ..     354     371 ..     352     381 .. 0.71

  Alignments for each domain:
  == domain 1  score: 58.2 bits;  conditional E-value: 1.3e-19
    PH_TFIIH  2 ykKkdGtLtltekrleWtpdasssapsvsiplseIknlqispagsaKvmLklvlkedks.eeesytFtFtngsearkerdavkdlLq 87
                +kKk G+L ++ +rl+W+++++  +p+++i+++ I nlq++pa+saK+m +++   +k  e++ ++F+Ft  ++ar++++ ++ +Lq
  EPX72669.1 11 FKKKLGVLSVD-TRLKWIAEGK-TNPTMDISFDAIANLQMTPASSAKIMVRVFIIMNKGeEPTPLVFSFTGLNNARQNCEMITAELQ 95
                79999*****8.89****8665.889****************************9996669**********999*********9997 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.93
    PH_TFIIH  45 gsaKvmLklvlked...k 59 
                 + +Kv+L++ ++++   k
  EPX72669.1 354 KDPKVILNIQEQDQfleK 371
                 5799***99999665542 PP

>> dbPDZ_assoc  Unstructured region between two PDZ domains on Dlg5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.09   5.4e+02      58      75 ..      47      64 ..      43      69 .. 0.82
   2 ?   11.2   0.0   5.7e-05      0.34      14      61 ..     328     382 ..     320     392 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.09
  dbPDZ_assoc 58 qttPatspknslRlaaea 75
                 q tPa+s+k  +R+ + +
   EPX72669.1 47 QMTPASSAKIMVRVFIIM 64
                 78***********87655 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 5.7e-05
  dbPDZ_assoc  14 sssrlesvsnqstpqgsGa....ttPdnhsiidtlseqD...eGtmtPpskqttP 61 
                  ss rl + ++++ +q+sG       P ++ +i  + eqD   e    P+skq+t 
   EPX72669.1 328 SSKRLKTETEHQYLQESGFhdleEDPKDPKVILNIQEQDqflEKNFAPSSKQSTE 382
                  899***************7222257999***********888899********95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (534 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1118  (0.0623571); expected 358.6 (0.02)
Passed bias filter:                      586  (0.0326845); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.26s 00:00:00.88 Elapsed: 00:00:00.44
# Mc/sec: 3615.92
//
Query:       EPX72670.1  [L=257]
Description: ribosomal protein subunit S7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.6e-35  120.5   0.6    6.4e-35  120.0   0.6    1.2  1  Ribosomal_S7  Ribosomal protein S7p/S5e
  ------ inclusion threshold ------
      0.023   14.1   0.0      0.029   13.8   0.0    1.2  1  TAF1_subA     TAF RNA Polymerase I subunit A
      0.046   14.4   0.9       0.13   12.9   0.0    2.1  3  COMPASS-Shg1  COMPASS (Complex proteins associated with Set1p


Domain annotation for each model (and alignments):
>> Ribosomal_S7  Ribosomal protein S7p/S5e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.0   0.6   1.1e-38   6.4e-35      11     149 .]     112     250 ..     104     250 .. 0.96

  Alignments for each domain:
  == domain 1  score: 120.0 bits;  conditional E-value: 1.1e-38
                   -----SSTTSBHHHHHHHHHSBTTBHHHHHHHHHHHHHHHHHHHSS-HHHHHHHHHHHCS-SEEEEEEBSSSSBEEEEEEE-HHHHHHHHHHHHHHH CS
  Ribosomal_S7  11 evlpdpkynselveklinklmkdGkkslAekivygaldiieektkkdplevleeAlenvkPrvevksrrvGGatyqvpvevrpkRrqalAlrwiiea 107
                   e+ + p   ++ v++l+n++m+dGkk++Aekiv +al+ii+++++k+p+++l++Al  ++P +++ + +   + ++ p+++++k+r+++A++w+++ 
    EPX72670.1 112 EIINRPFQVDPAVQHLVNMIMRDGKKTKAEKIVATALTIIQKEKGKNPVTLLRQALADISPIMKLITAKRFNKGVEFPIPLKEKQRRRIAIKWLLDS 208
                   57777888899************************************************************************************** PP

                   HSTSSSS-HHHHHHHHHHHHHTT-SHHHHHHHHHHHHHHHTG CS
  Ribosomal_S7 108 arkrkeksmaekLaeElidAaegegaavkkreethrmAeanr 149
                   +++ ++k+++e+La+E+++    +++ +kkr+ +h+m+  nr
    EPX72670.1 209 SKSHNSKRLSERLAREILAILDTTSTCFKKRDHLHKMCLVNR 250
                   **************************************9887 PP

>> TAF1_subA  TAF RNA Polymerase I subunit A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   4.8e-06     0.029     137     208 ..      87     158 ..      16     176 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 4.8e-06
   TAF1_subA 137 edeessllleqelhndfykaavkllrlalistPgvwdafllpyvqlLelggkedeAlevl.kec.aydkklPsr 208
                  + +++ + e+ l+n   ++ +++   ++i++P   d++++ +v+++   gk+ +A +++ +    ++k++ ++
  EPX72670.1  87 TEPKEEKIEENFLENVWSNSPKSVD--EIINRPFQVDPAVQHLVNMIMRDGKKTKAEKIVaTALtIIQKEKGKN 158
                 4455555566666666666667777..9******************************9966654555555555 PP

>> COMPASS-Shg1  COMPASS (Complex proteins associated with Set1p) component shg1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   2.2e-05      0.13      22      97 ..      57     128 ..      52     133 .. 0.86
   2 ?   -2.3   0.0       1.2   7.4e+03      31      57 ..     142     157 ..     130     171 .. 0.49
   3 ?   -2.0   0.0         1     6e+03      34      39 ..     219     224 ..     192     245 .. 0.52

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2.2e-05
  COMPASS-Shg1  22 dfkeseaeqnlrkkveeivesevkkdpsllfknrgkaaaliegeidrsdvykkleegvdrivdqdlqeepklreii 97 
                   + ++s+  +nl+++++e v +  k++ + +++ +   +++ie++  + +v ++  ++vd+i+++  q +p++++ +
    EPX72670.1  57 EEWNSPGLENLLAQLQEAVGESTKTNDTSITEPK---EEKIEENFLE-NVWSNSPKSVDEIINRPFQVDPAVQHLV 128
                   56899999*******************8888844...5789999999.78888889**********9999998875 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 1.2
  COMPASS-Shg1  31 nlrkkveeivesevkkdpsllfknrgk 57 
                   ++ ++             +++ k++gk
    EPX72670.1 142 KIVATAL-----------TIIQKEKGK 157
                   3333333...........333333333 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 1
  COMPASS-Shg1  34 kkveei 39 
                   +++   
    EPX72670.1 219 ERLARE 224
                   222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       958  (0.053433); expected 358.6 (0.02)
Passed bias filter:                      593  (0.0330749); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 2028.33
//
Query:       EPX72671.1  [L=841]
Description: RhoGEF Scd1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.7e-36  123.1   0.0    1.6e-35  122.0   0.0    1.6  1  PH_10     Pleckstrin homology domain
    2.8e-33  115.7   2.8    8.7e-33  114.1   2.8    1.9  1  RhoGEF    RhoGEF domain
    4.3e-29  100.6   0.1      1e-28   99.4   0.1    1.7  1  CDC24     CDC24 Calponin
    3.6e-17   62.0   0.3    9.7e-17   60.7   0.3    1.8  1  PB1       PB1 domain
     0.0025   18.3   0.1     0.0062   17.0   0.1    1.7  1  PH        PH domain


Domain annotation for each model (and alignments):
>> PH_10  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.0   0.0   4.5e-39   1.6e-35       3     123 .]     423     535 ..     421     535 .. 0.96

  Alignments for each domain:
  == domain 1  score: 122.0 bits;  conditional E-value: 4.5e-39
       PH_10   3 fGeLllhdtltVkkdsdsereyevyLFekillcvkevkeekkkksksssllkkkssssskkkktklqLKGrilisnvtevtssskpgsyslqiswkgdk 101
                 fG+Lll d+++V+k +d erey+vyLFekillc+ke+++  kk+ +s s++kk       k+  +lqLKGril+sn+t v+++++++ y l+++w+gd+
  EPX72671.1 423 FGQLLLWDVVNVSK-ADIEREYYVYLFEKILLCCKELSPL-KKQARSISINKKP------KRMDTLQLKGRILVSNITAVVPNTSADPYALHVFWRGDP 513
                 9*************.*********************9988.9999999999986......7899*********************************** PP

       PH_10 102 elesftlrfkneeqlkkWesal 123
                 + esf+l+++nee+ + W s+l
  EPX72671.1 514 HNESFVLKLRNEETHRLWLSTL 535
                 ******************9876 PP

>> RhoGEF  RhoGEF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.1   2.8   2.4e-36   8.7e-33       1     182 []     225     393 ..     225     393 .. 0.90

  Alignments for each domain:
  == domain 1  score: 114.1 bits;  conditional E-value: 2.4e-36
                 HHHHHHHHHHHHHHHHHHHHHHTHCCCHHCTCCHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHH.HHHTTSS-S-SHHHHHHHHSTHHHHHHHHHCHHH CS
      RhoGEF   1 vikElleTErsYvrdLkvlvevylkplselevlseeeikiiFsnieeilelhrsflleeLeerlkeseeqkeaqsigdvflkfadkfkkYseYcsnypn 99 
                 v++E++eTE +Y++dL++l + ++ +l++ ++ls e + +iF n++eil+++r+fl   Le +l   +   + q+ig +fl + + f+ Y+ +c nyp 
  EPX72671.1 225 VLAEIYETELKYIQDLEYL-SDFMTTLQQRKILSLETVLKIFTNLNEILDFQRRFL-VGLEMNL---SLPPHDQRIGALFLALEERFSVYQVFCLNYPT 318
                 689****************.69999***************************6666.4466666...6778899************************* PP

                 HHHHHHHHHHHHHHHHHHHHHHHTSGGGTT--HHHHTTHHHHHHHHHHHHHHHHHHTS-TTSHHHHHHHHHHHHHHHHHHHHH CS
      RhoGEF 100 alkllkelskknkkfkafleeaeerpecskldLeslLikPvqRlprYpLLLkellkntpeshpdyealkkaleaikevaseiN 182
                 a++l+  ++ +  ++  +le           ++  lLikP+qR+++YpLLL++l+kntp++ p  e+l++ + ++ ++a+++N
  EPX72671.1 319 AQQLIIDNQGQLTELGYLLE--------PCYEFPALLIKPIQRICKYPLLLSQLIKNTPHDYPYNEELRQGMACVVRIANKVN 393
                 *******7777777744444........458999*****************************99***************998 PP

>> CDC24  CDC24 Calponin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.4   0.1   2.8e-32     1e-28       1      89 []     103     192 ..     103     192 .. 0.99

  Alignments for each domain:
  == domain 1  score: 99.4 bits;  conditional E-value: 2.8e-32
       CDC24   1 dPvtqlwkllrqGspLlalfNalkpeeklevde.vksddlkvcKksvydFllackkeLgfedeelftisdlfsedttdlvkvlkvvnkvl 89 
                 dPvt++w ++r G+pL+al+N ++p+++++v++ v+ ++ ++cK+ +y+Fll+ckk+L f d+ lf is++fs++t+ l+k lk+v+++l
  EPX72671.1 103 DPVTEIWLFCRFGYPLCALYNLVSPDQPINVNSsVTLENRNACKAELYRFLLMCKKNLRFGDNVLFSISEIFSDSTSSLIKALKTVETLL 192
                 9******************************9999****************************************************987 PP

>> PB1  PB1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.7   0.3   2.7e-20   9.7e-17       3      82 ..     746     839 ..     744     841 .] 0.90

  Alignments for each domain:
  == domain 1  score: 60.7 bits;  conditional E-value: 2.7e-20
                 EEEEEETTEEEEEEEEGSSS-HHHHHHHHHHHHTST.......CCSEEEEEEETTSSEEEESSHHHHHHHHHHHHHT.......SSC.CEEEEEE CS
         PB1   3 dlKlrygggirrelsvssnisfeeLrakvekrfkls.......dedvklkYpdedgdlVtitsDeDLeealeearsl.......ksk.tlrlhvq 82 
                  ++++ ++     l vs+nis+ eL++kve+++ l+       + +v+lkY+dedgd++titsDeD+ +a+e+++         +++ +  lhv+
  EPX72671.1 746 MIRSQLHDVSFA-LVVSRNISYGELLSKVEHKIRLCgftkdndSLRVRLKYIDEDGDFITITSDEDVLMAFETCTYEildpkhnRGMdSTTLHVV 839
                 677777888888.9**************************99999*****************************988888888866668888886 PP

>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.1   1.7e-06    0.0062      17     105 .]     439     540 ..     423     540 .. 0.83

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 1.7e-06
                 SEEEEEEEEETTEEEEESST................TCTTESSEEEEEESTTEEEEEEECTTSSSSTSEEEEEESTSSSTEEEEEEESSHHHHHHHHHH CS
          PH  17 swkkrwfvLkdsellyyknd................ksekdkepkgsislsncevvevvatedpkrkfcfelriverngsrtyllqasseeerkeWika 99 
                 + ++++++L+++ ll +k+                 k++   ++kg i +sn++ v    ++++  ++ + +    + + ++++l+  +ee  + W+++
  EPX72671.1 439 IEREYYVYLFEKILLCCKELsplkkqarsisinkkpKRMDTLQLKGRILVSNITAVV---PNTSADPYALHVFWRGDPHNESFVLKLRNEETHRLWLST 534
                 5578999***99999999989999999999999888999999999999999999996...56888888888833333335******************* PP

                 HHHHHH CS
          PH 100 iqsaik 105
                 ++++ik
  EPX72671.1 535 LRRLIK 540
                 **9885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (841 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       690  (0.0384851); expected 358.6 (0.02)
Passed bias filter:                      490  (0.02733); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.67u 0.29s 00:00:00.96 Elapsed: 00:00:00.43
# Mc/sec: 5887.58
//
Query:       EPX72672.1  [L=267]
Description: hypothetical protein SOCG_00435 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.85   10.1   3.9        2.6    8.6   2.3    2.4  2  DUF16     Protein of unknown function DUF16


Domain annotation for each model (and alignments):
>> DUF16  Protein of unknown function DUF16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.4      0.11   1.9e+03      40      70 ..      33      63 ..       5      92 .. 0.63
   2 ?    8.6   2.3   0.00015       2.6      28     102 ..      80     178 ..      65     180 .. 0.64

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.11
                HHHHH...HHHHHHHHHHHHHHHHHHHHHHH CS
       DUF16 40 eakvdklgeqinkleqkvekqgekikelkve 70
                 ++   l+ + ++le kv+ q+   k l   
  EPX72672.1 33 HNRYLLLKAKKEALERKVHYQTTYAKALDIL 63
                4555555556666666666666555555443 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00015
                 B-..BHHHHHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHH....................................HHHHHHHHHHHHHH CS
       DUF16  28 fkdsnkqrLkkieakvdklgeqinkleqkvekqgekikelkveqkaqgeeln.............................kvdetleliletLqkink 97 
                 f d  k+ L++ ++k +    +in+l + v+++++    l+veq+ ++ ++                              + d ++ +i+etL++i+k
  EPX72672.1  80 FED-SKKVLEETQEKWQ--VAEINRLSKLVSTLTQGA--LTVEQESRKSSIPteiqtilqnsveeihlqlerlglledpspSSDMSISSIIETLHRISK 173
                 553.3445665555544..445666666666555544..5555555555444445566666666666666677788899999999************** PP

                 HHHHH CS
       DUF16  98 RlDsi 102
                  lD i
  EPX72672.1 174 SLDAI 178
                 ***98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (267 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1060  (0.0591221); expected 358.6 (0.02)
Passed bias filter:                      572  (0.0319036); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 1891.93
//
Query:       EPX72673.1  [L=860]
Description: V-type ATPase V0 subunit A [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.2e-295  982.8   7.7   1.7e-295  982.2   7.7    1.2  1  V_ATPase_I  V-type ATPase 116kDa subunit family


Domain annotation for each model (and alignments):
>> V_ATPase_I  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  982.2   7.7  9.5e-300  1.7e-295       2     813 .]      59     854 ..      58     854 .. 0.92

  Alignments for each domain:
  == domain 1  score: 982.2 bits;  conditional E-value: 9.5e-300
  V_ATPase_I   2 eLGelglvqfrDlnedvnafqrkfvkevrrcdemerklrfleeeieklekavikeeeaeesleapeekeldeleeelekleeelkelnenleklkkeln 100
                 +LGel++++f+Dln+dv af+r+fv+e+r +de er+lr+l++ei+ ++ ++  + ++++ + + e+ +++++ +++++le ++++l e++++l++++ 
  EPX72673.1  59 ALGELSTIHFKDLNRDVVAFHRSFVREIRLLDEAERQLRYLHSEIALNSIEIPDHYHTTNYEITLETITIEDIIDKISRLEVRVRQLVESSRSLNANYL 157
                 59********************************************9777666666667777788999******************************* PP

  V_ATPase_I 101 elvelkavlekakefleeeeeeeeeeeseeeeee...keeeeeeeseeeeeeelleeeee...................lsfvaGvikrekveaferil 177
                 + +e+++vl+k+++f++++++ +++   ++++ +       e++ ++   e++l     e                   l+fv+G+i++ k++ +eril
  EPX72673.1 158 QQLEYSNVLSKVDAFFAKSTNAHNHFDINTDNGSvlaG---EDDATAPLIENAL-----ElgttgsfnsedtnartsisLDFVTGIIPSVKFQFLERIL 248
                 ****************9885555544443333332321...2222222222222.....133345677889999999999******************* PP

  V_ATPase_I 178 wralrgnlflrqaeieepledpetgekveksvfiiffqgeqlkekikkicesfgaklyelpeseeereeklkeveeriedlekvleqteealkevleei 276
                 wr+lrgnl++ q++ +e+++ + +++  ek+vf++f++g+q+ ++i++i es+ga+l++++e+++ r+ ++++v+ +i+d+  vle+t++al ++l+ i
  EPX72673.1 249 WRTLRGNLYIYQTRADESVIRE-NEDVEEKTVFLVFAHGTQILSRIRRISESLGATLFSVDEDSSIRTGQVQQVNGNISDIFAVLENTRSALYTELAFI 346
                 *****************99854.667778********************************************************************** PP

  V_ATPase_I 277 akeleewklkvkkekaiyhtLnlfnldvtkkvliaegWvpkeeleeiqkalkeateessssvpsilneietketpPTyfrtnkfteafQeivdaYGiar 375
                 a+++++w+ +++k ka+y+++nlf++d+++k+liaegW+p+++l  +qk+l+++++  +s++psiln+i+tketpPTyfr+nkfteafQ+++d+YG+a+
  EPX72673.1 347 AEHISSWESILHKDKAVYQAMNLFSYDQNHKCLIAEGWCPTANLPLVQKTLRDVSDLVDSQAPSILNIIRTKETPPTYFRVNKFTEAFQSLIDSYGVAT 445
                 *************************************************************************************************** PP

  V_ATPase_I 376 YrEvNpalftiitFPFlFavMFGDiGHGlllllfalllvlkekklkkk.kkdeilemlfsgRYiillmGlfsiYtGliYNdifskslnlfgSswevkek 473
                 YrEvN ++++i+tFPFlFa+MFGD+GHG++++++al+++++ekkl++k + deil m+f gRY++llmGlfs+Y+G+iYNd+fsk+++lf+S+w ++  
  EPX72673.1 446 YREVNHGIVAIVTFPFLFAIMFGDLGHGAIMAAVALMFIMHEKKLATKkDMDEILGMIFYGRYMVLLMGLFSMYVGFIYNDLFSKPMSLFTSRWAWP-- 542
                 *********************************************999789*********************************************7.. PP

  V_ATPase_I 474 aveeeelkkekkeekvYpfGlDpaWklaenellflnSlKmKlsvilGviqMlfgvllslvNalyfkkkldiilefiPqllfllsifgYlvlliiyKWlv 572
                  v++e+++++  ++ +Yp+G+DpaW++a+n+llf+nS+KmK+sv++Gvi+M+++++lsl N+++fk+kldi++ f+P+l+fl +ifgYlv++iiyKW+v
  EPX72673.1 543 -VKSEDTNARAIQTGTYPIGIDPAWHSADNNLLFMNSYKMKVSVVIGVIHMTYCLFLSLSNYRFFKRKLDIYAVFLPSLIFLEAIFGYLVITIIYKWSV 640
                 .44556667899*************************************************************************************** PP

  V_ATPase_I 573 dweaekekapsllntlinmflskgkvkeeelyegqetvqvvLlllalvcvpvlllvkPlilklkhkkkkkkkekkkeeeeeeeeeeeeeeeeeeeeaee 671
                 dw+ +  ++pslln+li mfls+gk+ ee+l++gq+++q++L+l++l+c+p+ll+vkP++l+++h+++  + ++                ++ +     
  EPX72673.1 641 DWKGNDWQPPSLLNMLILMFLSPGKI-EEPLFRGQKQLQILLVLASLICIPWLLCVKPYFLWREHSQQDVRYQSV---------------NDPQ----- 718
                 **977778*****************9.99**********************************999966555322...............1111..... PP

  V_ATPase_I 672 eeeeeeeeeeeeeeeeeeeeeeeefdfgevfihqvIhtIEfvLgciSnTASYLRLWALSLAHaqLseVlwemvlkkallksksvlgvillvilfavfav 770
                      + +ee   ++e+ee +ee fdfge++ihqvIhtIEf+LgciS+TASYLRLWALSLAH+qLs+Vlw+m+l++a+ ++++v+g i++vilfa++++
  EPX72673.1 719 -----NIDEEALLNTENEEPQEEGFDFGEIVIHQVIHTIEFCLGCISHTASYLRLWALSLAHNQLSTVLWNMTLANAF-QMTGVVGSIFIVILFAFWFI 811
                 .....112233445566788899*****************************************************76.88****************** PP

  V_ATPase_I 771 ltvavLllmeglsafLHaLRLhWVEfqsKFykgdGykFepfsf 813
                 +t+ vL+ meg+sa+LH+LRLhWVE +sK+++g+Gy+F+pf+f
  EPX72673.1 812 VTCLVLVAMEGTSAMLHSLRLHWVEGMSKHFEGEGYAFTPFTF 854
                 *****************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (860 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       802  (0.044732); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.30s 00:00:00.99 Elapsed: 00:00:00.61
# Mc/sec: 4236.96
//
Query:       EPX72674.1  [L=430]
Description: RNA-binding protein Nop12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.4e-20   72.9   0.4    7.5e-14   51.3   0.0    3.8  3  RRM_1         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
     0.0066   16.4   0.1        4.4    7.4   0.0    2.5  2  Nup35_RRM_2   Nup53/35/40-type RNA recognition motif
  ------ inclusion threshold ------
      0.026   14.4   0.0          5    7.1   0.0    2.5  2  RRM_occluded  Occluded RNA-recognition motif


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.1   0.00022       1.3       1      34 [.     165     205 ..     165     218 .. 0.69
   2 !    8.8   0.0   0.00023       1.3      41      69 ..     227     254 ..     203     255 .. 0.87
   3 !   51.3   0.0   1.3e-17   7.5e-14       1      69 [.     271     340 ..     271     341 .. 0.94

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00022
                 EEEESETTTS.....SHHHHHHHHHTTSCEEEEEEEEE..T CS
       RRM_1   1 lfVgnLppdv.....teeeLkelFskfGpiksiklvrd..e 34 
                 +fV+nLp+ +       +   ++F++fG+iksi+  +   +
  EPX72674.1 165 IFVNNLPSKIvldkhEYKSFAKHFRQFGQIKSIRFRSLafS 205
                 6788887776333334567899************9876544 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00023
                 EEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1  41 fafVeFeskedAekAlealngkklggrel 69 
                  a+V ++  ++A++Al+ ln + +++r l
  EPX72674.1 227 NAYVVYDEASSARNALS-LNATLFMDRHL 254
                 59***************.*******9987 PP

  == domain 3  score: 51.3 bits;  conditional E-value: 1.3e-17
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTT.EEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealng.kklggrel 69 
                 +fVgnL++++ ee L ++F++ G+i+ ++++rd +t+  kgfa+++F+ + + +kAl  ln+ ++ +gr+l
  EPX72674.1 271 IFVGNLAFEAEEEPLWRYFGQSGEIEYVRIIRDpKTNLGKGFAYIQFKEPLSVDKALL-LNEkQMPEGRTL 340
                 8*********************************************************.999566666666 PP

>> Nup35_RRM_2  Nup53/35/40-type RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0   0.00074       4.4      18      34 ..     185     223 ..     175     242 .. 0.66
   2 !    6.6   0.0    0.0013       7.9      19      53 .]     287     327 ..     278     327 .. 0.73

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.00074
  Nup35_RRM_2  18 lehFasfGeIvkhyvp......................k 34 
                  + hF++fG+I  + ++                      +
   EPX72674.1 185 AKHFRQFGQIKSIRFRslafseflprkvaflekklhaeR 223
                  57***********99977777777666666666666553 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0013
  Nup35_RRM_2  19 ehFasfGeIvkhyvp........kevsvmyvkfesekdaekAL 53 
                  ++F + GeI     +         ++ ++y++f+ + + +kAL
   EPX72674.1 287 RYFGQSGEIEYV--RiirdpktnLGKGFAYIQFKEPLSVDKAL 327
                  588888888542..22245666645779**************8 PP

>> RRM_occluded  Occluded RNA-recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.0   0.00084         5      38      74 ..     225     260 ..     215     263 .. 0.80
   2 ?    4.7   0.0    0.0047        28      41      77 ..     313     349 ..     304     351 .. 0.81

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.00084
  RRM_occluded  38 heGAivefkdekiagkasLaLdgsefegkklrcGtvk 74 
                      A v++ de++ ++ +L+L+ + f +++lr+ +v+
    EPX72674.1 225 TVNAYVVY-DEASSARNALSLNATLFMDRHLRVDSVS 260
                   55566665.778899*****************98875 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.0047
  RRM_occluded  41 AivefkdekiagkasLaLdgsef.egkklrcGtvkdLk 77 
                   A ++fk+  ++ ka+L L+ +++ eg++lr++  k++k
    EPX72674.1 313 AYIQFKEPLSVDKALL-LNEKQMpEGRTLRISRAKSIK 349
                   8899999999999877.56666538*******999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (430 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2556  (0.142562); expected 358.6 (0.02)
Passed bias filter:                      500  (0.0278878); expected 358.6 (0.02)
Passed Vit filter:                       129  (0.00719505); expected 17.9 (0.001)
Passed Fwd filter:                        31  (0.00172904); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.83u 0.34s 00:00:01.17 Elapsed: 00:00:00.51
# Mc/sec: 2551.13
//
Query:       EPX72675.1  [L=209]
Description: hypothetical protein SOCG_00438 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       388  (0.0216409); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.29s 00:00:00.72 Elapsed: 00:00:00.44
# Mc/sec: 1436.73
//
Query:       EPX72676.1  [L=252]
Description: chorismate mutase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.03   14.7   0.5       0.67   10.3   0.2    2.7  2  CM_2      Chorismate mutase type II


Domain annotation for each model (and alignments):
>> CM_2  Chorismate mutase type II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0     0.022   3.9e+02       2      31 ..      15      44 ..      14      77 .. 0.80
   2 ?   10.3   0.2   3.7e-05      0.67      13      65 ..     147     232 ..     142     240 .. 0.70

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.022
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        CM_2  2 keIdeiDdeileLLaeRaelakevgeyKke 31
                + + + +d+i++ + eRa++  +   yKk 
  EPX72676.1 15 SALIRQEDTIVFDFLERAQFPVNEKVYKKG 44
                5566678999999******98888888864 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 3.7e-05
                 HHHHHHHHHHHHHHHHH....HHCTSG.................SS-HHHHHHHHHHHHHHH................S-HHHHHHHHHH CS
        CM_2  13 eLLaeRaelakevgeyK....keeglp.................vydpeReaevlerleega................ldeeaierifre 65 
                 + L++R  + k v+e+K         +                 + dp +e+ vl+rl  +a                ++++++ +i++e
  EPX72676.1 147 QSLSRRIHYGKFVAEAKflanP----EkykqlieardsegivneIVDPVQEERVLKRLHYKAltygrdsadptkptdkINADTVVSIYKE 232
                 6688888888888888844330....245555666777788888**************99443333344455556666777777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (252 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       462  (0.0257683); expected 358.6 (0.02)
Passed bias filter:                      396  (0.0220871); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.29s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 1750.06
//
Query:       EPX72677.1  [L=172]
Description: DUF962 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-09   37.4   0.2    3.3e-09   36.7   0.2    1.3  1  DUF962    Protein of unknown function (DUF962)


Domain annotation for each model (and alignments):
>> DUF962  Protein of unknown function (DUF962)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.7   0.2   1.8e-13   3.3e-09      57      91 ..       1      35 [.       1      38 [. 0.94

  Alignments for each domain:
  == domain 1  score: 36.7 bits;  conditional E-value: 1.8e-13
      DUF962 57 fafvGHfvfEkrkPAlfknplqsllidplmvllel 91
                ++f+GH++fEk++PAl++n++qs++ +pl+++le+
  EPX72677.1  1 MQFIGHGFFEKKRPALLDNLVQSIFFAPLFAFLET 35
                69****************************99886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       305  (0.0170115); expected 358.6 (0.02)
Passed bias filter:                      276  (0.0153941); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.36s 00:00:00.92 Elapsed: 00:00:00.56
# Mc/sec: 927.99
//
Query:       EPX72678.1  [L=1242]
Description: cytoskeletal protein binding protein Sla1 family [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.1e-31  106.6   0.2    7.1e-31  105.8   0.2    1.4  1  SHD1      SLA1 homology domain 1, SHD1
    1.1e-27   95.7   3.3    1.3e-09   37.7   0.0    4.4  4  SH3_9     Variant SH3 domain
    6.7e-24   83.2   1.8    1.5e-10   40.5   0.0    4.8  4  SH3_1     SH3 domain
      5e-17   61.3   0.0      8e-05   22.2   0.0    4.6  4  SH3_2     Variant SH3 domain
    0.00021   21.6  30.0    0.00021   21.6  30.0    8.3  8  DUF1720   Domain of unknown function (DUF1720)
  ------ inclusion threshold ------
      0.027   14.4   0.0       0.06   13.3   0.0    1.5  1  SAM_4     SAM domain (Sterile alpha motif)


Domain annotation for each model (and alignments):
>> SHD1  SLA1 homology domain 1, SHD1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.8   0.2   2.4e-34   7.1e-31       4      66 ..     610     672 ..     607     673 .. 0.97

  Alignments for each domain:
  == domain 1  score: 105.8 bits;  conditional E-value: 2.4e-34
        SHD1   4 kPdpakvRtWtDrtgsFkVeAeflglkdgkirLhkvnGvkiaVpvekmskeDleyvekvtgks 66 
                 kPd +k+RtWtDrtg+FkV+Aeflg++d+ki+Lhk nGvki+Vp++kms +Dl++ve +tgk+
  EPX72678.1 610 KPDETKLRTWTDRTGAFKVDAEFLGFSDDKIHLHKSNGVKISVPSTKMSYKDLDFVELMTGKK 672
                 8***********************************************************987 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.1   1.8e-08   5.4e-05      10      48 ..      31      76 ..      12      77 .. 0.80
   2 !   31.7   0.2   3.4e-11     1e-07       2      49 .]      88     135 ..      87     135 .. 0.98
   3 !   37.7   0.0   4.4e-13   1.3e-09       2      49 .]     513     561 ..     512     561 .. 0.94
   4 ?   -0.1   0.0      0.29   8.7e+02      13      25 ..     780     792 ..     779     798 .. 0.80

  Alignments for each domain:
  == domain 1  score: 23.0 bits;  conditional E-value: 1.8e-08
       SH3_9 10 ddeLsLqrGDvitvieesedgWlegs......l.tGrtGlvPanyv 48
                + eL + +++++ ++++ ed+W++++        +++tG vP+ny+
  EPX72678.1 31 ERELFIAEDEIVCLLQKGEDDWYLVKrninspDkDEETGIVPSNYI 76
                33999********************97665442699*********9 PP

  == domain 2  score: 31.7 bits;  conditional E-value: 3.4e-11
       SH3_9   2 lypyepreddeLsLqrGDvitvieesedgWlegsltGrtGlvPanyve 49 
                 ly+ye ++ de s+++++v+   + ++++W++ ++++++Gl P+ny+e
  EPX72678.1  88 LYDYEKQSIDEVSFPADQVLDAYGSTNEDWVLTRYNQQYGLAPRNYLE 135
                 8*********************************************97 PP

  == domain 3  score: 37.7 bits;  conditional E-value: 4.4e-13
       SH3_9   2 lypyepreddeLsLqrGDvitviee.sedgWlegsltGrtGlvPanyve 49 
                 +y +e+  +deL ++++D++++ ++ ++++W+ ++l+G+ G+vPa++++
  EPX72678.1 513 VYGFEAEAPDELTVSANDRVVIVNDtASSDWWKCRLNGKEGVVPASFIK 561
                 699********************77379*******************96 PP

  == domain 4  score: -0.1 bits;  conditional E-value: 0.29
       SH3_9  13 LsLqrGDvitvie 25 
                 L L +GDvi+v++
  EPX72678.1 780 LGLKEGDVIRVMK 792
                 6699*******85 PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.1   4.4e-06     0.013       9      48 .]      29      73 ..      28      73 .. 0.91
   2 !   18.6   0.0   3.4e-07     0.001       3      47 ..      88     130 ..      86     131 .. 0.94
   3 !   40.5   0.0   5.2e-14   1.5e-10       4      48 .]     514     557 ..     513     557 .. 0.97
   4 !    4.5   0.0    0.0089        27      13      30 ..     779     796 ..     773     799 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 4.4e-06
                SSTTBXEBSTTEEEEEEEECSSSEEEEEETTS.....TEEEEEEG CS
       SH3_1  9 eesdELsfkkGDviivleksedgWwkgrlkgt.....gkeGliPs 48
                e++ EL + +++++ +l+k ed+W+ ++++ +      ++G++Ps
  EPX72678.1 29 ETERELFIAEDEIVCLLQKGEDDWYLVKRNINspdkdEETGIVPS 73
                56899***********************99888888899999997 PP

  == domain 2  score: 18.6 bits;  conditional E-value: 3.4e-07
                 SSSBEXSSTTBXEBSTTEEEEEEEECSSSEEEEEETTSTEEEEEE CS
       SH3_1   3 lYDYeaeesdELsfkkGDviivleksedgWwkgrlkgtgkeGliP 47 
                 lYDYe+++ dE+sf  + v+     ++++W+  r++   + Gl P
  EPX72678.1  88 LYDYEKQSIDEVSFPADQVLDAYGSTNEDWVLTRYNQ--QYGLAP 130
                 9***********************************4..899998 PP

  == domain 3  score: 40.5 bits;  conditional E-value: 5.2e-14
                 SSBEXSSTTBXEBSTTEEEEEEEECSS.SEEEEEETTSTEEEEEEG CS
       SH3_1   4 YDYeaeesdELsfkkGDviivleksed.gWwkgrlkgtgkeGliPs 48 
                 Y +eae +dEL+   +D + +++++ + +Wwk+rl+  gkeG +P+
  EPX72678.1 514 YGFEAEAPDELTVSANDRVVIVNDTASsDWWKCRLN--GKEGVVPA 557
                 99**********************************..69*****6 PP

  == domain 4  score: 4.5 bits;  conditional E-value: 0.0089
                 BXEBSTTEEEEEEEECSS CS
       SH3_1  13 ELsfkkGDviivleksed 30 
                  L +k+GDvi v +++++
  EPX72678.1 779 TLGLKEGDVIRVMKHVNE 796
                 589**********99886 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.3   0.0   7.2e-05      0.21      10      56 ..      28      78 ..      10      79 .. 0.80
   2 !   15.4   0.0   3.7e-06     0.011       5      56 ..      88     136 ..      84     137 .. 0.91
   3 !   22.2   0.0   2.7e-08     8e-05       8      56 ..     516     562 ..     514     563 .. 0.91
   4 !    6.5   0.0    0.0022       6.5      15      27 ..     772     791 ..     754     804 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 7.2e-05
                SCGCCB--B-TTEEEEEE..EEEECTTEEEEEEC.......CCEEEEEGCGEEE CS
       SH3_2 10 gedkseLsfkkGdvikvlslgskdsdgwwegevg.......GrvGlfPsslvee 56
                +e ++eL + +++++++l    k+ d+w+++ ++          G++Ps++ +e
  EPX72678.1 28 PETERELFIAEDEIVCLL---QKGEDDWYLVKRNinspdkdEETGIVPSNYIAE 78
                3445559999********...**********8866688877778******9987 PP

  == domain 2  score: 15.4 bits;  conditional E-value: 3.7e-06
                 SS-B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEECCCEEEEEGCGEEE CS
       SH3_2   5 iedyvgedkseLsfkkGdvikvlslgskdsdgwwegevgGrvGlfPsslvee 56 
                 + dy+ ++ +e sf +++v+ ++   ++ +++w + +++ ++Gl+P++++e+
  EPX72678.1  88 LYDYEKQSIDEVSFPADQVLDAY---GSTNEDWVLTRYNQQYGLAPRNYLEP 136
                 568999999999***********...99**********************97 PP

  == domain 3  score: 22.2 bits;  conditional E-value: 2.7e-08
                 B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEECCCEEEEEGCGEEE CS
       SH3_2   8 yvgedkseLsfkkGdvikvlslgskdsdgwwegevgGrvGlfPsslvee 56 
                 +++e ++eL+  ++d + ++   ++ s +ww+++ +G+ G++P s+ ++
  EPX72678.1 516 FEAEAPDELTVSANDRVVIV--NDTASSDWWKCRLNGKEGVVPASFIKP 562
                 5788999********88888..799999****************99886 PP

  == domain 4  score: 6.5 bits;  conditional E-value: 0.0022
                 B.......--B-TTEEEEEE CS
       SH3_2  15 e.......LsfkkGdvikvl 27 
                 +       L +k+Gdvi+v 
  EPX72678.1 772 LtpemlrtLGLKEGDVIRVM 791
                 04445555***********8 PP

>> DUF1720  Domain of unknown function (DUF1720)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -8.2  12.0         6   1.8e+04       3      36 ..     162     195 ..     160     206 .. 0.75
   2 ?   -7.4   5.9         6   1.8e+04       2      18 ..     243     258 ..     238     298 .. 0.54
   3 ?   -4.1   3.1         6   1.8e+04      14      33 ..     822     842 ..     813     845 .. 0.52
   4 !   21.6  30.0     7e-08   0.00021       1      75 []     916    1001 ..     913    1001 .. 0.88
   5 !   11.2  41.7   0.00012      0.37       6      74 ..     984    1050 ..     981    1051 .. 0.69
   6 !    9.2  37.9   0.00053       1.6       1      72 [.    1024    1087 ..    1023    1098 .. 0.85
   7 ?  -11.0  14.1         6   1.8e+04       5      49 ..    1111    1137 ..    1088    1161 .. 0.43
   8 ?   -0.4   2.0      0.53   1.6e+03      10      44 ..    1176    1216 ..    1170    1225 .. 0.71

  Alignments for each domain:
  == domain 1  score: -8.2 bits;  conditional E-value: 6
     DUF1720   3 pqqtGfqppqqqqpqqq.qplqpqpTGfmpqqqtg 36 
                 pq+   q++q++ p+++ +plq+ pT + +++++ 
  EPX72678.1 162 PQPAASQQAQPPPPPPPiPPLQS-PTSVSSPPPPP 195
                 78888888888888888888888.78888877765 PP

  == domain 2  score: -7.4 bits;  conditional E-value: 6
     DUF1720   2 qpqqtGfqppqqqqpqq 18 
                 qpq+  + pp ++ p++
  EPX72678.1 243 QPQTDTLPPPPPP-PAP 258
                 5533322222222.222 PP

  == domain 3  score: -4.1 bits;  conditional E-value: 6
     DUF1720  14 qqpqqq.qplqpqpTGfmpqq 33 
                  +p  q +  +pqp   m+qq
  EPX72678.1 822 STPEAQaPEPTPQPAAPMNQQ 842
                 333333334455555555554 PP

  == domain 4  score: 21.6 bits;  conditional E-value: 7e-08
     DUF1720    1 lqpqqtGfqppqqqqpqqq........qplqpqpTGfmpqqqtgqglqpqpTG.ggqfapglqpqqTGf......qeqaqqglqPqaTGf 75  
                  l+pq+tG   ++   ++++        +pl  qpTGf+p+ +    l +qpTG + q++p l  qqTG       ++++++gl++q+TGf
  EPX72678.1  916 LAPQPTGITIQNAYFTAPPpaysdpfqSPLYVQPTGFQPPAS---ALPAQPTGfQAQMPP-LSVQQTGIqqpmnyIASQPTGLKTQPTGF 1001
                  5899999987766666665699999999***********998...8*******8888888.********999999999999999999998 PP

  == domain 5  score: 11.2 bits;  conditional E-value: 0.00012
     DUF1720    6 tGfqppqqqqpqqq.qplqpqpTGfmpqqqtgqglqpqpTG.ggqfapglqpqqTGfqeqaqqglqPqaTG 74  
                    +   q+++  +q +++ +qpTG++ q++   g+++q+TG g+q ++ +q qqTG ++q+ ++ +Pq+TG
  EPX72678.1  984 MNYIASQPTGLKTQpTGFSAQPTGMQYQPT---GMNSQMTGiGMQPTG-MQYQQTGTMPQQFKPTMPQSTG 1050
                  445555555555555566666666665554...788888885555554.*********************9 PP

  == domain 6  score: 9.2 bits;  conditional E-value: 0.00053
     DUF1720    1 lqpqqtGfqppqqqqpqqq.qplqpqpTGfmpqqqtgq....glqpqpTGggqfapglqpqqTGfqeqaqqglqPqa 72  
                  +qp  tG+q +q+++++qq +p +pq+TG +  ++++q     l++qpTG       lq+q TG+    qq+++P +
  EPX72678.1 1024 MQP--TGMQYQQTGTMPQQfKPTMPQSTGQQHDMSNMQgqrmDLASQPTG-------LQSQYTGY----QQPFTPTP 1087
                  677..*************************999999889999********.......********....44444422 PP

  == domain 7  score: -11.0 bits;  conditional E-value: 6
     DUF1720    5 qtGfqppqqqqpqqqqplqpqpTGfmpqqqtgqglqpqpT.G.ggqf 49  
                  +t f+  qq++++++                     +q+  G  +q 
  EPX72678.1 1111 PTPFAYEQQNMYAPM--------------------DQQAYyGtDMQG 1137
                  233444444433333....................222222211111 PP

  == domain 8  score: -0.4 bits;  conditional E-value: 0.53
     DUF1720   10 ppqqqqpqqq......qplqpqpTGfmpqqqtgqglqpqpT 44  
                  +p+ ++p q       +p    p G+ ++qq++ + qp  T
  EPX72678.1 1176 QPYGGMPNQIsndpvsNPGLYMPSGYENMQQPSDYYQPSFT 1216
                  55544444445555555555668999999999989999887 PP

>> SAM_4  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0     2e-05      0.06       8      71 ..     735     797 ..     732     801 .. 0.94

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 2e-05
       SAM_4   8 tsewiqffkeagipaglavnyavsfvdnriqknmlldlskeimnelgitvvgdiiailkhakvv 71 
                 t +w +ff   g+   +   y+  f ++ ++ + +  l+ e++  lg+   gd+i ++kh   v
  EPX72678.1 735 TYDWFDFFLRCGVDFTVCNRYTRNFNNEHLDESSIPSLTPEMLRTLGLK-EGDVIRVMKHVNEV 797
                 789********************************************97.6*********9877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1242 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       891  (0.049696); expected 358.6 (0.02)
Passed bias filter:                      378  (0.0210832); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.05u 0.35s 00:00:01.40 Elapsed: 00:00:00.56
# Mc/sec: 6647.83
//
Query:       EPX72679.1  [L=203]
Description: 40S ribosomal protein S5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.3e-36  125.5   1.4    1.6e-36  125.2   1.4    1.1  1  Ribosomal_S7  Ribosomal protein S7p/S5e


Domain annotation for each model (and alignments):
>> Ribosomal_S7  Ribosomal protein S7p/S5e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.2   1.4   8.9e-41   1.6e-36      13     149 .]      58     203 .]      50     203 .] 0.94

  Alignments for each domain:
  == domain 1  score: 125.2 bits;  conditional E-value: 8.9e-41
                   ---SSTTSBHHHHHHHHHSB....TTBHHHHHHHHHHHHHHHHHHHSS-HHHHHHHHHHHCS-SEEEEEEBSSSSBEEEEEEE-HHHHHHHHHHHHH CS
  Ribosomal_S7  13 lpdpkynselveklinklmk....dGkkslAekivygaldiieektkkdplevleeAlenvkPrvevksrrvGGatyqvpvevrpkRrqalAlrwii 105
                   +   k+++ +ve+l n lm+    +Gkk lA +iv++a++ii+  t+++pl+vl++A+  + Pr++ +++   G+  +++v+v+p Rr+++A+  i+
    EPX72679.1  58 KRFRKARCFIVERLANSLMMngrnNGKKLLATRIVKHAFEIISLLTDQNPLQVLVDAVAACGPREDSTRIGSAGTVRRQAVDVSPLRRVNQAIALIT 154
                   444568899***********99999************************************************************************ PP

                   HHH...STSSSS-HHHHHHHHHHHHHTT-..SHHHHHHHHHHHHHHHTG CS
  Ribosomal_S7 106 eaa...rkrkeksmaekLaeElidAaege..gaavkkreethrmAeanr 149
                    +a   ++r+ ks++e+LaeE+i+Aa+g+  ++a+kk++e++r+A++nr
    EPX72679.1 155 IGAreaAFRNVKSISECLAEEIINAAKGSsnSYAIKKKDELERVAKSNR 203
                   99988899********************9899****************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       405  (0.0225891); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.36s 00:00:00.94 Elapsed: 00:00:00.56
# Mc/sec: 1093.20
//
Query:       EPX72680.1  [L=293]
Description: 2-oxoadipate and 2-oxoglutarate transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.5e-67  221.0   0.5    8.7e-24   83.3   0.0    3.0  3  Mito_carr  Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.3   0.0   4.9e-28   8.7e-24       2      92 ..       5      92 ..       4      97 .. 0.94
   2 !   69.0   0.0   1.4e-23   2.4e-19       3      92 ..     102     188 ..     100     192 .. 0.93
   3 !   65.8   0.2   1.3e-22   2.4e-18       4      95 ..     198     290 ..     195     292 .. 0.90

  Alignments for each domain:
  == domain 1  score: 83.3 bits;  conditional E-value: 4.9e-28
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr  2 elsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrl 92
                ++++  ++ aG++ag+ ++l  +PldvvKtr+q+  ++s++++   ++d+lkki++ eG + lyrG+lp +++ ap++alkf++++ + ++
  EPX72680.1  5 DIPFPVTFTAGAIAGISEVLSLYPLDVVKTRMQLTVGKSEYNG---TFDCLKKIVQREGASRLYRGILPPVMMEAPKRALKFASNDAYGKY 92
                688999********************************99977...*************************************99987665 PP

  == domain 2  score: 69.0 bits;  conditional E-value: 1.4e-23
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   3 lsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrl 92 
                  +++ +ll+G++ag ++++v+ P++++K+rlq  ++ sk+++   ++d+l+k++k+eG+ +ly G+ +++ r ++ +a +f+l ++++  
  EPX72680.1 102 STPALSLLTGSCAGFTESFVVVPFELMKIRLQDVNNASKYNG---TFDCLSKVIKHEGIFALYNGFEATMWRHVVWNAGYFGLIQKVRGS 188
                 567789***************************999999876...**************************************9998765 PP

  == domain 3  score: 65.8 bits;  conditional E-value: 1.3e-22
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS.HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkksskksksaa.ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                 ++ ++l+aG ++g+++t++ tP+dvvK r+qt+++   +  +++ +  +l +i keeG+++ly+G++p++lr  p  ++ +v+++++  +++k
  EPX72680.1 198 EMCNNLIAGTIGGIFGTFLSTPFDVVKSRVQTAPRIVGQVPKYNwAYPALFTIAKEEGFTALYKGFVPKVLRLGPGGGILLVVFNSVVGVYQK 290
                 5789*****************************9996554444459**************************************999888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       284  (0.0158403); expected 358.6 (0.02)
Passed bias filter:                      258  (0.0143901); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.32s 00:00:00.95 Elapsed: 00:00:00.55
# Mc/sec: 1603.60
//
Query:       EPX72681.1  [L=495]
Description: membrane transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-16   59.9  31.3      2e-16   59.9  31.3    2.1  2  MFS_1     Major Facilitator Superfamily
  ------ inclusion threshold ------
      0.023   15.0   0.1      0.023   15.0   0.1    2.7  4  DUF3382   Domain of unknown function (DUF3382)
       0.48   10.5   0.1       0.48   10.5   0.1    3.3  3  UPF0370   Uncharacterised protein family (UPF0370)


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.9  31.3   3.4e-20     2e-16       3     352 ..      89     453 ..      84     454 .. 0.80
   2 !   13.8  12.5   3.5e-06     0.021      62     173 ..     373     487 ..     373     494 .. 0.76

  Alignments for each domain:
  == domain 1  score: 59.9 bits;  conditional E-value: 3.4e-20
       MFS_1   3 laaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsd........rfGrrrvlllglllfalg.lllllfa..sslw.lll 89 
                 +  ++  +++++++p+   a+++ lg + ++ gl++++ +l+++++++p+  +++             r l+++ ++ ++g ll+ l a  +++  l+l
  EPX72681.1  89 INNMMCEMSATTALPISA-AYTQYLGGTDAFSGLVIGIPTLVSLAFMYPMLLFANpksahgytL--YFRPLFTSCFAHIIGhLLYSL-AyrAHWIyLIL 183
                 344444455555555555.88999**************************99999877444331..334666666666666344444.566888889** PP

       MFS_1  90 vlrvlqGlgagalfpagaaliadwfpkeergraigllsa.gfslGailgpllggllasslg.........Wravfyilaivsllafvlfllllpeeppe 178
                 ++r++ G+g  +++    +l+ ++f +++r+  ++ l++ +  lG++ g+ lgg+la +           ++a  +++ i+  + +++  +l+ e  p+
  EPX72681.1 184 IGRMFNGIGFTMFLYHKKYLADKYFVGRNRSTFLSTLNIlAQTLGFMSGAFLGGVLAKASQnsrnsywneYTAGSWFMLIAWGVYMIFLKVLFKEVLPD 282
                 *********9888888888888899999998888777765999**************555579****99988889999999999999989999999999 PP

       MFS_1 179 rkrkspkeeekgtgpaplvpawkallkdpvlw.illialllfffgfsglltllplylqevlglsglllaglllallalvgailallagrlsdrlgrrrr 276
                   r+ + +     + +++ + +++ + ++ +  +l++a+++  f ++g+ t +p+y+   ++++  +++g +lal++lv+ ++ l+++ ls+ l  r +
  EPX72681.1 283 DNRDVSHRA----EASQAQS-IRLSFLQKCFIiFLFLAAFTCYFSIMGYQTSIPIYASRAYNYN-PFQTGNFLALSSLVITPFILFSTLLSKWLEDRQI 375
                 999998888....8999999.777777775622344444444456666****************.8********************************* PP

       MFS_1 277 lllallllllaalglallavtssavllll..vlvliGfglgfvfpsllalasdlappeeagtasglfntagslggalg 352
                 +ll++ll++la+++ ++l + ++ ++  +  ++ l++fg+g+  +++++l s+ + p+ +  +s ++++  sl+  +g
  EPX72681.1 376 MLLGVLLGALALVIHLILDAVHKLPVQPYfvLYSLMTFGYGVGAAPFMSLSSKQLHPKFQILVSIVVQVGVSLADTVG 453
                 *********************55444444334444888999999***********99999999999999988887666 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 3.5e-06
       MFS_1  62 rrvlllglllfalglllll.f.a.sslw..lllvlrvlqGlgagalfpagaaliadwfpkeergraigllsagfslGailgpllgglla..sslgWrav 153
                 r ++llg+ll al+l++ l + a + l+  + +vl  l+ +g+g++++  ++l ++  +++ + ++  ++++g+sl+  +g++ gg+++  + +g+ a+
  EPX72681.1 373 RQIMLLGVLLGALALVIHLiLdAvHKLPvqPYFVLYSLMTFGYGVGAAPFMSLSSKQLHPKFQILVSIVVQVGVSLADTVGAITGGAIYniTTVGFIAM 471
                 569***********55555335365555326**********************************************************3333334444 PP

       MFS_1 154 fyilaivsllafvlfllllp 173
                  + la++ l+++    l l+
  EPX72681.1 472 NLGLAVLVLIVL----LCLW 487
                 444444444443....4333 PP

>> DUF3382  Domain of unknown function (DUF3382)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       1.6   9.4e+03      14      57 ..     131     172 ..     126     176 .. 0.54
   2 ?   15.0   0.1   3.8e-06     0.023      37      95 ..     259     317 ..     234     318 .. 0.87
   3 ?   -2.2   0.1      0.87   5.2e+03      41      65 ..     349     373 ..     335     391 .. 0.70
   4 ?   -3.7   0.7       2.6   1.6e+04      86      94 ..     476     484 ..     462     487 .. 0.60

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 1.6
     DUF3382  14 lvlfvpilGl..qleldgtrlvleprwglvaiavavvfvgqLlrpl 57 
                 l+ ++p+l +    +  g+ l   p    +++ + +  +g+Ll +l
  EPX72681.1 131 LAFMYPMLLFanPKSAHGYTLYFRP----LFTSCFAHIIGHLLYSL 172
                 5555555555222333444444444....67777777777777665 PP

  == domain 2  score: 15.0 bits;  conditional E-value: 3.8e-06
     DUF3382  37 rwglvaiavavvfvgqLlrplllqalkarkklkkveskadgvlvltqrwiillllvvAl 95 
                  + l+a++v ++f+  L++++l +  + +++ ++++++ +  l+  q+ +i+ l+++A+
  EPX72681.1 259 WFMLIAWGVYMIFLKVLFKEVLPDDNRDVSHRAEASQAQSIRLSFLQKCFIIFLFLAAF 317
                 4679************************99988888887777777***********997 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 0.87
     DUF3382  41 vaiavavvfvgqLlrplllqalkar 65 
                 +a+  +v+  + L+  ll+++l  r
  EPX72681.1 349 LALSSLVITPFILFSTLLSKWLEDR 373
                 5666666666777777777776664 PP

  == domain 4  score: -3.7 bits;  conditional E-value: 2.6
     DUF3382  86 iillllvvA 94 
                 ++l+l+v+ 
  EPX72681.1 476 AVLVLIVLL 484
                 344444444 PP

>> UPF0370  Uncharacterised protein family (UPF0370)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.1     8e-05      0.48       9      38 ..     178     206 ..     173     213 .. 0.89
   2 ?   -1.0   0.2      0.31   1.9e+03       2      21 ..     368     387 ..     367     398 .. 0.71
   3 ?   -0.6   0.5      0.24   1.4e+03      11      25 ..     479     492 ..     475     494 .. 0.67

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 8e-05
     UPF0370   9 WvillllvGillngikeLkrvdhkkfLdnk 38 
                 W i l+l+G ++ngi   + + hkk+L++k
  EPX72681.1 178 W-IYLILIGRMFNGIGFTMFLYHKKYLADK 206
                 5.56789*********************99 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.31
     UPF0370   2 eWLadYWWvillllvGilln 21 
                 +WL+d   ++l +l+G l  
  EPX72681.1 368 KWLEDRQIMLLGVLLGALAL 387
                 58888777777777776655 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.24
     UPF0370  11 illllvGillngike 25 
                 +l++l   l+n+ike
  EPX72681.1 479 VLIVL-LCLWNSIKE 492
                 44444.4689***97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (495 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       867  (0.0483574); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.74u 0.37s 00:00:01.10 Elapsed: 00:00:00.55
# Mc/sec: 2730.64
//
Query:       EPX72682.1  [L=254]
Description: tubulin specific chaperone cofactor C [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-21   75.5   2.3    4.6e-21   74.8   2.3    1.4  1  TBCC      Tubulin binding cofactor C
    6.8e-05   23.3   0.9    6.8e-05   23.3   0.9    1.9  2  TBCC_N    Tubulin-specific chaperone C N-terminal domain


Domain annotation for each model (and alignments):
>> TBCC  Tubulin binding cofactor C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.8   2.3   5.1e-25   4.6e-21       5     104 ..     147     244 ..     144     253 .. 0.88

  Alignments for each domain:
  == domain 1  score: 74.8 bits;  conditional E-value: 5.1e-25
                 EE-S-BS-EEEE-S--S-EEEES-BS-EEE----SS-EEEES-BS-EEE---SEEEEES-BS-EEE---SSEEEEES-BSEEEE------TTSHHHHHH CS
        TBCC   5 kisnlsdctiylldplssvtiddcknctivlgpvsgsvfiedcenctivvacrqlrihdctnvdvylltksrPiiedskgirfapynlsypeleehlkk 103
                  i+ l+ ct+ +   +s+v+i++ ++ct+ +  ++gs++i++ e+++++++c+q+r+h+++++++ l+++++P+ied+k+i f + + ++p l+ ++++
  EPX72682.1 147 IIQGLRGCTVNI-PCCSTVHINESDDCTFHFQSIQGSLHISHLEKSRLYASCHQFRLHESNHLSIELQCQTSPVIEDCKHIIFKN-PGAHPILDFSWAR 243
                 5788999****9.689*******************************************************************86.6666777666665 PP

                 H CS
        TBCC 104 a 104
                  
  EPX72682.1 244 P 244
                 5 PP

>> TBCC_N  Tubulin-specific chaperone C N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.9   7.6e-09   6.8e-05      54     115 ..      23      84 ..       8      84 .. 0.90
   2 ?   -1.6   0.1      0.39   3.5e+03      14      36 ..     101     124 ..      90     132 .. 0.50

  Alignments for each domain:
  == domain 1  score: 23.3 bits;  conditional E-value: 7.6e-09
      TBCC_N  54 esadksklkqkldeitaeiqeLqkllaessmfLpsYdlrsaqealskLkesleeareellPk 115
                 ++++++++++ +++ +++++++ ++l+e+   L +Yd  +  ++ls+L  +l ++r+e+lP+
  EPX72682.1  23 ADTSRTEKAKWFENRSEDVSRMTSMLNENQEQLAPYDRMKLMDQLSDLIVRLHQIRSEILPR 84 
                 6789999******************************************************8 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.39
      TBCC_N  14 lekrkeereseave.eekvdsFlk 36 
                 +   k+ re+++v+ +e+ + Fl+
  EPX72682.1 101 SYTHKQIREDTKVKrFENETLFLS 124
                 233333333333333555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       998  (0.055664); expected 358.6 (0.02)
Passed bias filter:                      528  (0.0294495); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.37s 00:00:01.00 Elapsed: 00:00:00.56
# Mc/sec: 1357.01
//
Query:       EPX72683.1  [L=278]
Description: heavy metal ion homeostasis protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-49  168.0   1.4    7.1e-46  156.7   0.1    2.5  3  DUF2370   Protein of unknown function (DUF2370)
  ------ inclusion threshold ------
       0.31   10.0   6.2        4.9    6.0   0.0    2.2  2  TMEM171   Transmembrane protein family 171


Domain annotation for each model (and alignments):
>> DUF2370  Protein of unknown function (DUF2370)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       0.3   2.7e+03      31      57 ..      37      64 ..      25      79 .. 0.62
   2 !  156.7   0.1   7.9e-50   7.1e-46      13     131 ..      95     212 ..      83     229 .. 0.91
   3 !   10.2   0.0   4.8e-05      0.43     186     223 ..     230     267 ..     216     270 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.3
     DUF2370 31 eeeekeekpPtYeeA..aaDaaPpYwett 57
                +  e++e  P Y++   ++D+ P+  e++
  EPX72683.1 37 D-IESDERAPLYQNSrqSTDTEPDTVESD 64
                3.556777777776521346666555544 PP

  == domain 2  score: 156.7 bits;  conditional E-value: 7.9e-50
     DUF2370  13 gagndGVFaNlsAkPdreeeeekeekpPtYeeAaaDaaPpYwettvlapslesdevlvdGlpvGnlfsfvwNllvsvsFqlvGFlltYlLHtthAakqG 111
                 ++  d VF+NlsAkP+++  e+++e+pPtYee aaD aPpYw+tt++ ps+ s+e+++dG+ vG+ ++f+w +lvs+ F +vGFl+tY+L +th  + G
  EPX72683.1  95 THYVDSVFSNLSAKPSADP-EKENEEPPTYEEVAADIAPPYWDTTMVVPSFGSNEIYIDGMTVGSPIAFFWSALVSFVFPFVGFLVTYVLSATHSGRYG 192
                 56789***********888.7799*************************************************************************** PP

     DUF2370 112 SraGLGitliqygfslrssa 131
                 S++GL +tl+q g++++ ++
  EPX72683.1 193 SQIGLSLTLLQRGYNMVVES 212
                 ****************9776 PP

  == domain 3  score: 10.2 bits;  conditional E-value: 4.8e-05
     DUF2370 186 sssewlayvlmilGlfiliksvvdylrvkrlekkvlas 223
                  +++++  +l i G++  +   v+++r++r++++++++
  EPX72683.1 230 PHQKLIGCILLITGWCFFLVDTVNFIRIRRTKNAIQQT 267
                 56788999************************999876 PP

>> TMEM171  Transmembrane protein family 171
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   6.3      0.01        90     222     309 ..      34     127 ..      13     136 .. 0.68
   2 ?    6.0   0.0   0.00055       4.9     163     183 ..     233     253 ..     217     277 .. 0.72

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.01
     TMEM171 222 PPPpyfaessasavtkspgass....llasenPPsyysifndgrtqta.eeegaaserdkesiytisgts.ssseisatqslsselpPryeeke 309
                 P     ++  a+  ++s ++ +      +s+n  + + i +dgr++ + +   ++++r+  + y  s  s  s++ sa ++   e pP yee +
  EPX72683.1  34 PEDDIESDERAPLYQNSRQSTDtepdTVESDNNVPLENISSDGRSSHSpQAASSSASRQPRTHYVDSVFSnLSAKPSADPEKENEEPPTYEEVA 127
                 55555555555554444444430011345678888999*****9876515556666777788888887551566677889999********965 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.00055
     TMEM171 163 qilGplivlvGLCffvvahvk 183
                 +++G ++ ++G Cff v  v 
  EPX72683.1 233 KLIGCILLITGWCFFLVDTVN 253
                 478999**********98875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       552  (0.0307881); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.29s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 1906.56
//
Query:       EPX72684.1  [L=1122]
Description: ubiquitin carboxy terminal hydrolase Ubp2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.5e-45  153.4   0.0    1.9e-44  152.1   0.0    1.7  1  UCH       Ubiquitin carboxyl-terminal hydrolase
    1.2e-41  140.4   3.2    1.6e-18   66.4   0.1    4.7  4  RPT       A repeated domain in UCH-protein
    1.2e-07   31.6   6.9    1.2e-07   31.6   6.9    2.3  2  UCH_1     Ubiquitin carboxyl-terminal hydrolase
  ------ inclusion threshold ------
        6.7    6.9   7.5       0.16   12.1   0.3    2.1  2  bZIP_2    Basic region leucine zipper


Domain annotation for each model (and alignments):
>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.1   0.0   4.3e-48   1.9e-44       1     257 []     613    1102 ..     613    1102 .. 0.92

  Alignments for each domain:
  == domain 1  score: 152.1 bits;  conditional E-value: 4.3e-48
                  -EES-SSSTHHHHHHHHHHHTSHHHHHHHHTCHHCCSSTCCCCC-.TT.TTS.TT.H.........HHHHHHHHHHHHHSH-CCEE--......... CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.x.........xxxxxxxxxxxxxxxxxxxxxx......... RF
         UCH    1 tGlsNlGntCymnsvlQcLfsipelrdyllsleevkkesrnkkelnesnplgkkg.e.........lakalkdlfkellkskskavsP......... 78  
                  +Gl+N+Gn Cy+ns+lQ++f i++lrd +l ++ +k++s  k++  + ++ g +  +         + ++l++lf++l+ +k++++ P         
  EPX72684.1  613 VGLENTGNFCYLNSLLQYYFIIKPLRDAVLGINYNKDVSMIKSKE-AVKKVGGRSvNrieflralqFTYELRSLFQQLITTKHSSILPssklaylal 708 
                  6****************************9987777777666544.33333333323788888888*************9999************** PP

                  ................................................................HHHHHHHHHHSGGGTSSSTCEHHHHHHHHHHHH CS
                  ................................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH   79 ................................................................kklkktlsklaksfsgykqqDaqEflaflLdql 111 
                                                                                    +  + +++++s+  ++qqD+ E++ ++L q+
  EPX72684.1  709 ipltmeqvkstsssvihpmelsnisteshqqdqqasapidashststsdlinlapsekdegaemPYFDISEEEVNSSLDLGRQQDVAECIDHVLFQI 805 
                  **************************************************************988899999999999******************** PP

                  HHHHCCHCCCHHHHHHCCCTTSHHHHHH-EEEEE....................................................EEEEEEB-SEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....................................................xxxxxxxxxxx RF
         UCH  112 hedlnrevaeekwkkhlkrndslitdlfegqlks....................................................klklkrlPeiL 156 
                  + +l      ++++ ++++ ++li +lf+g++k+                                                    +l +k+lP iL
  EPX72684.1  806 EVSLGP---TKNNEGSSSSDEDLIRRLFYGKTKQtlhddsqgtrsseelyshlivdlykerqtlydvldgvfetvtldlgnettkrSLCIKELPMIL 899 
                  ****99...56679999999***************************************************************************** PP

                  EEEEESEEETEE...EEE--SEEB--SEEE-GGGBSS-BTTS-TCS-B................................................. CS
                  xxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................................................. RF
         UCH  157 iihlkRfsynss...ksKlntkvefpeeldlssylaeekkkkteekkk................................................. 201 
                  +++++R+++++s   + K+n  vef +el +++y+++ + +  +   k                                                 
  EPX72684.1  900 QLQIQRVQFDRStgqPFKSNAYVEFGKELHMDRYVEDVNGEMAPLLDKywsmkqkigelqqrrkylmttnsqllssvetlatlstwadyqknsrlpi 996 
                  **********999*******************99987776665555558889999999999999999999999************************ PP

                  ............................................EEEEEEEEEESCTTSEEEEEEEECTTTTEEEEEETTEEEEE-HHCCCTT.... CS
                  ............................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.... RF
         UCH  202 ............................................YeLiavvvHsGslssGHYvayiknekngkWykydDetvkevkeeeevls.... 250 
                                                              Y+L a+++H+G++  GHY++y+++ k   ++ky+De v+ev+e+ ev      
  EPX72684.1  997 skklpqllheetekismelerlaqeerqtqkermhlfdnhinhsYDLLAIFIHRGQATFGHYWTYMRDLKTDVFRKYNDEYVTEVDES-EVFAdttg 1092
                  *******************************************************************999999*************98.44444566 PP

                  ...CEEEEEE CS
                  ...xxxxxxx RF
         UCH  251 ...sayiLfY 257 
                     ++y+L Y
  EPX72684.1 1093 ntaNPYMLTY 1102
                  789*****99 PP

>> RPT  A repeated domain in UCH-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   0.0   3.3e-05      0.15       6      57 ..     326     377 ..     323     379 .. 0.91
   2 !   13.5   0.0   1.2e-05     0.052      15      58 ..     414     457 ..     401     458 .. 0.93
   3 !   45.8   0.0   9.5e-16   4.3e-12       1      58 [.     466     520 ..     466     521 .. 0.96
   4 !   66.4   0.1   3.6e-22   1.6e-18       2      59 .]     538     596 ..     537     596 .. 0.97

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 3.3e-05
         RPT   6 yklLgidentdDdviitayqvkleddpsqkdklrrALkvIAeeRkSelLlnf 57 
                 + +Lg++++ +D+++   y+ + e+dp++++ +  A+  I + Rk  lL++ 
  EPX72684.1 326 FIALGVTNDYPDNLVCLFYNKQKENDPDNARIYVDAFAHIYNLRKTPLLKEQ 377
                 558*****************************************99999875 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 1.2e-05
         RPT  15 tdDdviitayqvkleddpsqkdklrrALkvIAeeRkSelLlnfL 58 
                  +D  i+  +   ++++p+ +++ r+ L+++A +R+S+ +l++L
  EPX72684.1 414 YTDKHILDTFLNVVQKQPETIRVQRENLETVACARQSKGILEYL 457
                 57999999***999*****************************9 PP

  == domain 3  score: 45.8 bits;  conditional E-value: 9.5e-16
         RPT   1 dveeAyklLgidentdDdviitayqvkleddpsqkdklrrALkvIAeeRkSelLlnfL 58 
                 dv+eAy++Lgi+++t+D +i +++ vk ed   +  k  +A+k+IAeeR+S+ L +fL
  EPX72684.1 466 DVQEAYSWLGISPDTEDGMIASVALVKSED---DSSKTLEAIKCIAEERNSSVLYEFL 520
                 79**************************99...889999******************9 PP

  == domain 4  score: 66.4 bits;  conditional E-value: 3.6e-22
         RPT   2 veeAyklLgi.dentdDdviitayqvkleddpsqkdklrrALkvIAeeRkSelLlnfLe 59 
                  ++Ay++L + d++++Dd++i++y++++ed+p++ d l+ ALk+I+e+R+S+l+++fLe
  EPX72684.1 538 TDDAYETLAVqDRDVSDDMLINVYTFAVEDQPERSDRLKSALKCIGESRNSKLIMHFLE 596
                 68********9999*******************************************97 PP

>> UCH_1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1      0.36   1.6e+03     196     229 ..      58      93 ..      44     179 .. 0.63
   2 !   31.6   6.9   2.7e-11   1.2e-07       1     297 [.     613    1063 ..     613    1084 .. 0.62

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.36
                 xxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxx.xxx RF
       UCH_1 196 wCekC..kryqpteqrktvknlPpvLalnakle.eee 229
                 wC  C   r++++ q ++  ++P+++   ++ +  e+
  EPX72684.1  58 WC-VCqkTRKHMHVQIQKDSDYPHIMEPGVEFTpPEQ 93 
                 55.3423455666666666788887765555553333 PP

  == domain 2  score: 31.6 bits;  conditional E-value: 2.7e-11
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..........................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1    1 sGLEnhivnsYlNslLQvlyfipplrnlalshlakeckke..........................hcLlcElgflfdmldkakglncqasnFlral 71  
                  +GLEn+ + +YlNslLQ ++ i+plr ++l       +k+                              +El  lf+ l + k ++++ s  l  l
  EPX72684.1  613 VGLENTGNFCYLNSLLQYYFIIKPLRDAVLGIN---YNKDvsmikskeavkkvggrsvnrieflraLQFTYELRSLFQQLITTKHSSILPSSKLAYL 706 
                  8*************************7666655...3444233677778888888888888888888888888888888888888888888888888 PP

                  x................xxxxxxxxxxxxxxxxxxx.......................xxxxxxxxxxx........................... RF
       UCH_1   72 s................sipeasalglileeeeete.......................kssaislssli........................... 102 
                                                     +                       +s +      +                           
  EPX72684.1  707 AlipltmeqvkstsssvI-----------------HpmelsnisteshqqdqqasapidASHS------Tstsdlinlapsekdegaempyfdisee 780 
                  844444444333333321.................0222222222222223344444443333......2333334777777888888888888888 PP

                  ..............xxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxx..x............ RF
       UCH_1  103 ..............qsfnrflldqlekelketkkns...seeesaieqllgtkaettirclkCgsek.srksstlvldlkyP..k............ 167 
                                 ++   +l q+e  l +tk+n+   s++e+ i +l+  k+++t++  + g+ + ++  s l++dl y   +            
  EPX72684.1  781 evnssldlgrqqdvAECIDHVLFQIEVSLGPTKNNEgssSSDEDLIRRLFYGKTKQTLHDDSQGTRSsEELYSHLIVDL-YKerQtlydvldgvfet 876 
                  888888888864333588888999999999988777998999999*****99999888887766666355555566688.63222455555555555 PP

                  .........xxxx.............................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxx RF
       UCH_1  168 .........psne.............................kkeakvtfasilksslerekttrawCekCkryqpteqr..ktvknlPpvLalnak 224 
                           +  +                             k++a+v+f ++l +    e+ +  + +  ++y +++q+     ++  ++++ n +
  EPX72684.1  877 vtldlgnetT--KrslcikelpmilqlqiqrvqfdrstgqpfKSNAYVEFGKELHMDRYVEDVNGEMAPLLDKYWSMKQKigELQQRRKYLMTTNSQ 971 
                  5555544320..1233333333333333333333333344444444455555555555555555555544444444433211233366667777777 PP

                  xxxx....xxxxxxxx.............xxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1  225 leee....eelelwkt.............knwlp...leiklsldedknleeklkeerekakaekeikvYeLqsvvvhigdskesghLvslvk 297 
                  l ++     +l+ w++             ++ l    ++i+++l++  ++e+++++er +  +++    Y+L ++ +h+g+++  gh+ ++ +
  EPX72684.1  972 LLSSvetlATLSTWADyqknsrlpiskklPQLLHeetEKISMELERLAQEERQTQKERMHLFDNHINHSYDLLAIFIHRGQAT-FGHYWTYMR 1063
                  6644333324555555999888888776645555444555555555555588888889999999****************666.9*****999 PP

>> bZIP_2  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.3   3.6e-05      0.16      24      51 ..     952     979 ..     950     981 .. 0.94
   2 ?   -5.3   2.1         4   1.8e+04      39      50 ..    1013    1024 ..    1004    1028 .. 0.46

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 3.6e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_2  24 kakeeeleervkeLeeeNaqLrqkveqL 51 
                 k+k  el++r k+L++ N+qL+  ve+L
  EPX72684.1 952 KQKIGELQQRRKYLMTTNSQLLSSVETL 979
                 89999*********************99 PP

  == domain 2  score: -5.3 bits;  conditional E-value: 4
                  HHHHHHHHHHHH CS
      bZIP_2   39 eeNaqLrqkveq 50  
                   e ++L q+ +q
  EPX72684.1 1013 MELERLAQEERQ 1024
                  344444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1122 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       734  (0.0409393); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.80u 0.25s 00:00:01.05 Elapsed: 00:00:00.47
# Mc/sec: 7244.23
//
Query:       EPX72685.1  [L=488]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-55  184.9   0.0    9.8e-19   67.0   0.0    3.3  3  RRM_1         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
    8.5e-07   28.6   0.0      0.029   13.9   0.0    3.1  3  RRM_5         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
    0.00054   20.0   0.1        1.8    8.6   0.0    2.8  3  RRM_3         RNA binding motif
     0.0012   19.0   0.0        1.4    9.1   0.0    3.1  3  RRM_7         RNA recognition motif
      0.003   17.4   0.1       0.34   10.8   0.0    2.7  2  RRM_9         RNA recognition motif
  ------ inclusion threshold ------
      0.019   14.8   0.0         12    5.8   0.0    3.1  3  RRM_occluded  Occluded RNA-recognition motif
      0.092   12.2   0.0       0.21   11.1   0.0    1.6  1  DUF3343       Protein of unknown function (DUF3343)
       0.18   11.8   0.0         12    5.9   0.0    3.1  3  DbpA          DbpA RNA binding domain


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.1   0.0   4.4e-18   9.9e-15       1      69 [.      79     147 ..      79     148 .. 0.98
   2 !   67.0   0.0   4.4e-22   9.8e-19       1      69 [.     180     248 ..     180     249 .. 0.98
   3 !   60.3   0.0   5.4e-20   1.2e-16       1      69 [.     314     382 ..     314     383 .. 0.98

  Alignments for each domain:
  == domain 1  score: 54.1 bits;  conditional E-value: 4.4e-18
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 ++VgnL++ v + eLk+++++ G +  +++ +  +g skg++++e+ + e+A++A+e+l ++k+++r +
  EPX72685.1  79 VYVGNLSYQVRWYELKDFMKQAGHVLYAEILNLPNGLSKGCGIIEYSTNEEAKRAVETLSNQKFMSRLI 147
                 8****************************************************************9977 PP

  == domain 2  score: 67.0 bits;  conditional E-value: 4.4e-22
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 lfVgnLp++v +++Lk+lF++ G ++++++  ++ g+s+g+++V ++s  dA++A+e+ln++ ++gr+l
  EPX72685.1 180 LFVGNLPYSVRWQDLKDLFRQAGTVVRADVQMNQEGRSRGIGIVLMNSANDANHAIEKLNNTSYMGRTL 248
                 8******************************************************************98 PP

  == domain 3  score: 60.3 bits;  conditional E-value: 5.4e-20
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 ++VgnLp+ ++++eL +lF+  G ++ +k+ ++++g s+g++ Ve++++ +A++A++++ g ++ggr l
  EPX72685.1 314 IYVGNLPWATNNQELFDLFRRTGNVVQAKIAYESNGYSRGYGVVEYAKEHEAADAIKNFSGCQYGGRHL 382
                 8****************************************************************9976 PP

>> RRM_5  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.13     3e+02      64      95 ..     117     148 ..     115     165 .. 0.80
   2 !   13.9   0.0   1.3e-05     0.029       4     100 ..     155     254 ..     151     273 .. 0.84
   3 !   10.0   0.0   0.00022       0.5      38      97 ..     322     385 ..     287     396 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.13
       RRM_5  64 ketalvqmgdasaveravqHLnnaklfgkrle 95 
                 k+  +++ +   +++rav+ L+n+k   + + 
  EPX72685.1 117 KGCGIIEYSTNEEAKRAVETLSNQKFMSRLIY 148
                 567789999999************98666555 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 1.3e-05
       RRM_5   4 lvpsllasvaatgspgaagvaegsVllVyglepdkvnldklFnlfclYgnvervkflktkketa....lvqmgdasaveravqHLnnaklfgkrleval 98 
                 + p++  ++   g+    g+  g  l+V +l p  v  + l  lf + g v r  +  ++++ +    +v m +a +++ a++ Lnn++  g+ lev l
  EPX72685.1 155 QEPKFGSQPFSHGHFVDRGNDAGRQLFVGNL-PYSVRWQDLKDLFRQAGTVVRADVQMNQEGRSrgigIVLMNSANDANHAIEKLNNTSYMGRTLEVRL 252
                 5788888888889988999999999999999.56789999*************9999998865333339**************************9987 PP

       RRM_5  99 SK 100
                  +
  EPX72685.1 253 DR 254
                 54 PP

  == domain 3  score: 10.0 bits;  conditional E-value: 0.00022
       RRM_5  38 kvnldklFnlfclYgnvervkflktkk....etalvqmgdasaveravqHLnnaklfgkrleva 97 
                   n ++lF lf   gnv + k+    +    ++ +v+ + + ++  a++ +++ +  g++l+v 
  EPX72685.1 322 ATNNQELFDLFRRTGNVVQAKIAYESNgysrGYGVVEYAKEHEAADAIKNFSGCQYGGRHLQVS 385
                 56899*****************9887611115689*******************9999999986 PP

>> RRM_3  RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0   0.00083       1.8      16      63 ..      91     143 ..      80     155 .. 0.78
   2 !    8.1   0.0    0.0012       2.6      15      72 ..     191     253 ..     180     264 .. 0.77
   3 ?   -2.3   0.0       2.1   4.7e+03      40      56 ..     355     371 ..     324     389 .. 0.68

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00083
                 HHHHHHCHCCS-ECEEEE-T...TSSE..EEEEESSHHHHHHHHHHHHHC-B- CS
       RRM_3  16 edikellsklgevayvdyek...gdke..gevrFkedeeakkalekateaklk 63 
                  ++k+++++ g+v y +  +   g ++  g + + ++eeak+a+e + + k +
  EPX72685.1  91 YELKDFMKQAGHVLYAEILNlpnGLSKgcGIIEYSTNEEAKRAVETLSNQKFM 143
                 679************8766432254442279**************99988655 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.0012
                 HHHHHHHCHCCS-ECEEEE-TTSSE.....EEEEESSHHHHHHHHHHHHHC-B-CCTSSEEEE CS
       RRM_3  15 redikellsklgevayvdyekgdke.....gevrFkedeeakkalekateaklkikdaevtle 72 
                  +d+k+l+++ g+v   d++ +++      g v+ +++++a++a+ek+ ++  + +  ev+l+
  EPX72685.1 191 WQDLKDLFRQAGTVVRADVQMNQEGrsrgiGIVLMNSANDANHAIEKLNNTSYMGRTLEVRLD 253
                 589*********99988887544422234479****************999777777777665 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 2.1
                 EEEEESSHHHHHHHHHH CS
       RRM_3  40 gevrFkedeeakkalek 56 
                 g v +++++ea  a+++
  EPX72685.1 355 GVVEYAKEHEAADAIKN 371
                 66777777777777765 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       1.1   2.5e+03       2      28 ..      77     103 ..      76     107 .. 0.88
   2 !    6.0   0.0    0.0057        13       2      29 ..     178     205 ..     177     223 .. 0.89
   3 !    9.1   0.0   0.00061       1.4       1      29 [.     311     339 ..     311     368 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 1.1
       RRM_7   2 rkvFvGGlPiDiteeelkatfkefgkv 28 
                 r+v+vG l   +   elk+ +k+ g+v
  EPX72685.1  77 RRVYVGNLSYQVRWYELKDFMKQAGHV 103
                 79**********999999999988876 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.0057
       RRM_7   2 rkvFvGGlPiDiteeelkatfkefgkvl 29 
                 r++FvG lP  +  ++lk+ f++ g+v+
  EPX72685.1 178 RQLFVGNLPYSVRWQDLKDLFRQAGTVV 205
                 789********************99875 PP

  == domain 3  score: 9.1 bits;  conditional E-value: 0.00061
       RRM_7   1 srkvFvGGlPiDiteeelkatfkefgkvl 29 
                 s +++vG lP+  +++el + f++ g+v+
  EPX72685.1 311 SNRIYVGNLPWATNNQELFDLFRRTGNVV 339
                 789*********************99875 PP

>> RRM_9  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.023        51      43      68 ..     226     252 ..     201     254 .. 0.84
   2 !   10.8   0.0   0.00015      0.34      35      68 ..     353     386 ..     315     388 .. 0.76

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.023
       RRM_9  43 ktkkdae.eLlkwnGvrFAGnnLkiei 68 
                 ++ +da+ ++ k+n++++ G +L+++ 
  EPX72685.1 226 NSANDANhAIEKLNNTSYMGRTLEVRL 252
                 67788863699************9985 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00015
       RRM_9  35 ggvlvgyVktkkdaeeLlkwnGvrFAGnnLkiei 68 
                 g  +v y k+ + a+++++++G ++ G +L+++ 
  EPX72685.1 353 GYGVVEYAKEHEAADAIKNFSGCQYGGRHLQVSY 386
                 5567778899999******************986 PP

>> RRM_occluded  Occluded RNA-recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.23   5.1e+02      36      68 ..     115     147 ..      76     151 .. 0.71
   2 ?    4.3   0.0     0.017        37      41      70 ..     221     250 ..     179     251 .. 0.78
   3 ?    5.8   0.0    0.0055        12      42      73 ..     356     387 ..     314     389 .. 0.90

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.23
  RRM_occluded  36 pdheGAivefkdekiagkasLaLdgsefegkkl 68 
                    ++++ i+e++ ++ a +a+  L +++f  + +
    EPX72685.1 115 LSKGCGIIEYSTNEEAKRAVETLSNQKFMSRLI 147
                   4678889*********99999999999988766 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.017
  RRM_occluded  41 AivefkdekiagkasLaLdgsefegkklrc 70 
                    iv ++++++a  a+ +L+++++ g++l++
    EPX72685.1 221 GIVLMNSANDANHAIEKLNNTSYMGRTLEV 250
                   5999***********************986 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.0055
  RRM_occluded  42 ivefkdekiagkasLaLdgsefegkklrcGtv 73 
                   +ve+++e+ a+ a+    g+++ g++l+++ v
    EPX72685.1 356 VVEYAKEHEAADAIKNFSGCQYGGRHLQVSYV 387
                   79**************************9877 PP

>> DUF3343  Protein of unknown function (DUF3343)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   9.2e-05      0.21      24      63 ..     104     143 ..      91     149 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 9.2e-05
     DUF3343  24 iearliplPreisagCGlalrvneedieeasrllseaeip 63 
                 + a++  lP  +s+gCG+      e+ ++a + ls++++ 
  EPX72685.1 104 LYAEILNLPNGLSKGCGIIEYSTNEEAKRAVETLSNQKFM 143
                 67999*************8777999999999999988765 PP

>> DbpA  DbpA RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.31   6.9e+02      48      71 ..     127     150 ..     126     151 .. 0.87
   2 ?    5.9   0.0    0.0055        12      48      71 ..     228     251 ..     227     252 .. 0.92
   3 ?    1.0   0.0      0.19   4.2e+02      48      71 ..     362     385 ..     357     386 .. 0.88

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.31
                 TT-HHHHHHHHTT--SSS----EE CS
        DbpA  48 kekaeevlkalkkkkikGrkvrve 71 
                 +e+a++++++l+++k+  r + v+
  EPX72685.1 127 NEEAKRAVETLSNQKFMSRLIYVR 150
                 5889************99988775 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0055
                 TT-HHHHHHHHTT--SSS----EE CS
        DbpA  48 kekaeevlkalkkkkikGrkvrve 71 
                 +++a++++++l+++ + Gr++ v+
  EPX72685.1 228 ANDANHAIEKLNNTSYMGRTLEVR 251
                 6899*****************997 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.19
                 TT-HHHHHHHHTT--SSS----EE CS
        DbpA  48 kekaeevlkalkkkkikGrkvrve 71 
                 + +a +++k++++ ++ Gr ++v+
  EPX72685.1 362 EHEAADAIKNFSGCQYGGRHLQVS 385
                 567899*************99985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (488 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       527  (0.0293937); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 3479.13
//
Query:       EPX72686.1  [L=726]
Description: hypothetical protein SOCG_00449 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.5e-38  132.2   0.0    3.1e-38  131.2   0.0    1.5  1  AAA              ATPase family associated with various cellul
    4.1e-07   29.9   0.0    6.1e-06   26.1   0.0    2.5  2  Vps4_C           Vps4 C terminal oligomerisation domain
    5.1e-06   26.2   0.2    1.6e-05   24.6   0.0    2.0  1  AAA_lid_3        AAA+ lid domain
    2.5e-05   24.1   0.0    4.8e-05   23.1   0.0    1.4  1  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
      4e-05   23.9   0.2    0.00057   20.2   0.2    2.4  1  AAA_22           AAA domain
    8.4e-05   23.0   0.6    0.00021   21.7   0.1    1.9  1  AAA_16           AAA ATPase domain
    0.00012   22.1   0.2     0.0012   18.9   0.0    2.8  3  AAA_5            AAA domain (dynein-related subfamily)
    0.00068   18.9   0.0     0.0013   18.1   0.0    1.3  1  TIP49            TIP49 P-loop domain
     0.0037   17.4   0.4      0.013   15.6   0.0    2.1  2  AAA_33           AAA domain
      0.004   16.9   0.0     0.0084   15.9   0.0    1.5  1  IstB_IS21        IstB-like ATP binding protein
     0.0046   17.1   0.0     0.0081   16.3   0.0    1.4  1  AAA_2            AAA domain (Cdc48 subfamily)
     0.0048   16.3   0.8      0.009   15.4   0.1    1.7  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
     0.0073   16.8   0.0      0.024   15.2   0.0    1.9  1  AAA_18           AAA domain
     0.0083   15.3   0.0      0.016   14.4   0.0    1.3  1  DUF815           Protein of unknown function (DUF815)
     0.0097   15.9   0.0      0.026   14.5   0.0    1.7  1  AAA_14           AAA domain
  ------ inclusion threshold ------
      0.014   15.2   0.1       0.64    9.8   0.0    2.6  2  AAA_11           AAA domain
      0.019   14.6   0.0        0.1   12.2   0.0    2.0  2  AAA_25           AAA domain
      0.025   14.1   0.2       0.14   11.7   0.0    2.2  2  AAA_7            P-loop containing dynein motor region
      0.035   13.8   0.1       0.12   12.1   0.0    1.9  2  AAA_24           AAA domain
      0.061   12.7   0.0          4    6.8   0.0    2.3  2  TniB             Bacterial TniB protein
      0.073   13.0   0.0       0.23   11.4   0.0    1.9  1  NACHT            NACHT domain
      0.085   12.5   0.0       0.38   10.4   0.0    2.1  2  Sigma54_activat  Sigma-54 interaction domain
       0.12   12.9   0.1        1.5    9.3   0.0    2.4  2  ABC_tran         ABC transporter
       0.18   11.2   0.0       0.33   10.4   0.0    1.4  1  PhoH             PhoH-like protein
       0.22   10.8   0.1        2.1    7.6   0.0    2.3  3  ATPase           KaiC


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.2   0.0   4.3e-41   3.1e-38       1     132 []     481     620 ..     481     620 .. 0.98

  Alignments for each domain:
  == domain 1  score: 131.2 bits;  conditional E-value: 4.3e-41
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHH..TTCCCHHHHHHHHHHHHHHHHTT CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr..sgseseeeervvnqLlteldgvk 97 
                 +ll+GppGtGKT+la+ava+e++++f++is+s+l+sk++gesek +r+lf+ ak+ + psi+f+DEid+l ++r  +g+e+e+++r+  ++l +++ + 
  EPX72686.1 481 MLLFGPPGTGKTMLARAVATESKSTFFSISASSLTSKFLGESEKLVRALFTLAKKLS-PSIIFVDEIDSLLSARsaDGNEHESSRRIKTEFLIQWSSLA 578
                 89******************************************************9.****************99999*******************9 PP

                 TS........SSTEEEEEEESSGGGSTHHHHSTTSSEEEETTS CS
         AAA  98 kk........eskvivigatnrpdkldpallrgRfdrkieiel 132
                 +         + +v+v++atn p+++d+a + +Rf r+ +i+l
  EPX72686.1 579 RAaasresadQPRVLVLAATNLPWSIDEAAR-RRFVRRTYIPL 620
                 99********999******************.7*****99985 PP

>> Vps4_C  Vps4 C terminal oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.73   5.3e+02      33      55 ..     629     651 ..     626     656 .. 0.83
   2 !   26.1   0.0   8.5e-09   6.1e-06      27      61 .]     689     723 ..     683     723 .. 0.94

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.73
      Vps4_C  33 DflkalkkarptVskeDLekhee 55 
                 ++++ l++++   ++eD+e+ ++
  EPX72686.1 629 HIKNLLQHQKHCLTDEDIEEVIK 651
                 6788999***********99877 PP

  == domain 2  score: 26.1 bits;  conditional E-value: 8.5e-09
      Vps4_C  27 PpvtlkDflkalkkarptVskeDLekheeFTkefG 61 
                 +p +l+Df+++lk  rp+V+ + Le+++++  efG
  EPX72686.1 689 RPMNLQDFQQSLKVIRPSVNLDGLERYDRWNTEFG 723
                 47899*****************************9 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.0   2.3e-08   1.6e-05       1      32 [.     643     674 ..     643     695 .. 0.89

  Alignments for each domain:
  == domain 1  score: 24.6 bits;  conditional E-value: 2.3e-08
   AAA_lid_3   1 dvdlkeLAerTeGySGADlaalcreAallAlr 32 
                 d d++e+ ++T+ ySG Dl al + Aa+  lr
  EPX72686.1 643 DEDIEEVIKATKFYSGSDLTALAKDAAMGPLR 674
                 78*************************87666 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.0   6.7e-08   4.8e-05      34      96 ..     479     549 ..     471     557 .. 0.76

  Alignments for each domain:
  == domain 1  score: 23.1 bits;  conditional E-value: 6.7e-08
      RuvB_N  34 dhvllyGpPGlGkttlakiiakelgvklkitsgPvle.....kagdlaalltnleek...dvlfideihrl 96 
                   +ll+GpPG Gkt la+ +a+e ++++ + s+  l      ++  l+  l +l +k    ++f+dei  l
  EPX72686.1 479 RGMLLFGPPGTGKTMLARAVATESKSTFFSISASSLTskflgESEKLVRALFTLAKKlspSIIFVDEIDSL 549
                 5689********************9998877776654111115677887777776654448*******877 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.2     8e-07   0.00057       5      64 ..     478     529 ..     475     579 .. 0.72

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 8e-07
      AAA_22   5 agilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsst.sskdllrellral 64 
                 a+ ++++G++GtGKT+l+r ++ +          +++++++ ++s+t +     ++l+ral
  EPX72686.1 478 ARGMLLFGPPGTGKTMLARAVATES---------KSTFFSISASSLTsKFLGESEKLVRAL 529
                 66689******************98.........788888888888843333344444444 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.1     3e-07   0.00021      21     141 ..     476     595 ..     469     605 .. 0.60

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 3e-07
      AAA_16  21 sgrp.elvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipysalaqalareellrqlldeaesaeleawrekleealaavpelagaea.. 116
                 +  p + +ll G++G+GK+ l+r+++++ + +   f++  + +l+s+     ++     e+l+r+l + a++ +++       ++l ++++++g e+  
  EPX72686.1 476 E--PaRGMLLFGPPGTGKTMLARAVATESKST---FFSISASSLTSK-----FLGES--EKLVRALFTLAKKLSPSIIFVDEIDSLLSARSADGNEHes 562
                 3..3489*******************866666...666666666333.....22222..3566666666555444444444444444444445554445 PP

      AAA_16 117 .....srllellkrllallsrder...plvlvl 141
                      + +l ++++l++ ++++e+   p vlvl
  EPX72686.1 563 srrikTEFLIQWSSLARAAASRESadqPRVLVL 595
                 555666666666666644444344455677665 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       4.6   3.3e+03      71     107 ..      53      89 ..      52     104 .. 0.83
   2 ?   -2.0   0.0       4.7   3.3e+03      22      54 ..     362     395 ..     359     400 .. 0.76
   3 !   18.9   0.0   1.6e-06    0.0012       2      78 ..     481     550 ..     480     612 .. 0.70

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 4.6
                 EESGGG--HHHHHHHHHHHHSSEEE..-SSSEEE--- CS
       AAA_5  71 lDEveraesevlnsLlslleerrllleeggelvkakn 107
                 +D+++  e++ +++L  +le+   ++++++++v  ++
  EPX72686.1  53 IDDLNPEERQYTEALVCMLEQISTQVDQLRNEVVLQE 89 
                 7899988899999999999999999999999887665 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 4.7
                 GB.S--EEEEE--TT--HHHHH--B--....... CS
       AAA_5  22 al.nreveyvqltrdtteedlkgrreikngttsl 54 
                 +l  +e+     +++++++ +k +++++++t++ 
  EPX72686.1 362 LLsPSELSLSSVNDSISSQSVKDGWDVSSSTEKV 395
                 55666777778899999*********98777665 PP

  == domain 3  score: 18.9 bits;  conditional E-value: 1.6e-06
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------.G-SEEEEESGGG-- CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar.egeilvlDEverae 78 
                 +lL GppGtgK++la+ +a   +++++   ++++  +++++g+ e      +lv   ++ a + +++i+++DE++ + 
  EPX72686.1 481 MLLFGPPGTGKTMLARAVATESKSTFF--SISASSLTSKFLGESE------KLVRALFTLAKKlSPSIIFVDEIDSLL 550
                 79**************98765555555..5555556667788777......455555554444899999999998665 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   1.8e-06    0.0013      50     103 ..     478     529 ..     466     534 .. 0.88

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 1.8e-06
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  50 GravLlaGpsgtGktalaiaiskelgedvpfvalsgsevyslevkktevltqal 103
                  r++Ll Gp+gtGkt la a++ e  ++  f ++s+s + s  +  +e l++al
  EPX72686.1 478 ARGMLLFGPPGTGKTMLARAVATE--SKSTFFSISASSLTSKFLGESEKLVRAL 529
                 599*******************98..4578999********9999999998875 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.2       4.1   2.9e+03      21      73 ..      79     130 ..      73     139 .. 0.67
   2 !   15.6   0.0   1.8e-05     0.013       3      88 ..     482     612 ..     481     616 .. 0.58

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 4.1
      AAA_33  21 kklgavllssdtlrrrlfgtdqqsktdytrvldrlyqilnelarkalsagrnv 73 
                  +l  +++ + +++++l+  ++ + t y++ +  ++++l++  r++++++ ++
  EPX72686.1  79 DQLRNEVVLQEAAFQQLKSHQPANYTAYKEEEG-ATKHLSRGSRERQRSATGT 130
                 556667888888888888888878777777544.4445566666677666555 PP

  == domain 2  score: 15.6 bits;  conditional E-value: 1.8e-05
      AAA_33   3 llvGlpGsGKstlaerllkklg..avllssdt...................................lrrrlfgtdqqskt.dytrvldr.lyqilnel 62 
                 ll G+pG+GK+ la+ ++ + +  ++ +s  +                                   l+++  ++++++++ ++++ ++   +  l++ 
  EPX72686.1 482 LLFGPPGTGKTMLARAVATESKstFFSISASSltskflgeseklvralftlakklspsiifvdeidsLLSARSADGNEHESsRRIKTEFLiQWSSLARA 580
                 689**************9999977777887777777777777776666666666666666666655533322222222222122222222233355566 PP

      AAA_33  63 arkalsagrn..vildatnls....rrerarf 88 
                 a+++ sa ++  ++l atnl     +++r+rf
  EPX72686.1 581 AASRESADQPrvLVLAATNLPwsidEAARRRF 612
                 66666666554244466655444435555555 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   1.2e-05    0.0084      48      78 ..     479     509 ..     474     556 .. 0.66

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 1.2e-05
   IstB_IS21  48 enivllGpsGvGKshlaialgveavraglsv 78 
                  +++l+Gp+G+GK+ la a+++e   + +s+
  EPX72686.1 479 RGMLLFGPPGTGKTMLARAVATESKSTFFSI 509
                 5789***************998765544444 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   1.1e-05    0.0081       6      83 ..     481     552 ..     476     634 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 1.1e-05
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG---..----THHHHHHHHHTTT-HHHHTTSEEEEETGGG---- CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselle..eeevehlvsrligappgyvgaeegGivllDEidKihpk 83 
                 +ll gp g+Gkt+la+a+a   +    +++  + as+l+     e+e+lv  l   ++    +    i+++DEid   + 
  EPX72686.1 481 MLLFGPPGTGKTMLARAVATESK----STFFSISASSLTSkfLGESEKLVRALFTLAK----KLSPSIIFVDEIDSLLSA 552
                 6889***************9998....59**********9443455555555554443....33456********88775 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       8.7   6.2e+03     115     170 ..      56     112 ..      53     123 .. 0.69
   2 !   15.4   0.1   1.3e-05     0.009      25      43 ..     481     499 ..     478     504 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 8.7
  Mg_chelatase 115 lpefkrkvlevLRePledgevtisrakakv.efparfqlvaamNpcpcgklkdkeke 170
                   l   +r+  e+L   le+ + ++ + +++v    a fq + +  p+    +k++e +
    EPX72686.1  56 LNPEERQYTEALVCMLEQISTQVDQLRNEVvLQEAAFQQLKSHQPANYTAYKEEEGA 112
                   555567777888888888888887776665245688888888888877777766655 PP

  == domain 2  score: 15.4 bits;  conditional E-value: 1.3e-05
  Mg_chelatase  25 lllvGppGsGKtmlakrlp 43 
                   +ll+GppG+GKtmla++++
    EPX72686.1 481 MLLFGPPGTGKTMLARAVA 499
                   89*************9875 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   3.3e-05     0.024       2      81 ..     482     597 ..     481     624 .. 0.69

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 3.3e-05
      AAA_18   2 lltGtpGvGKttlakeLskrlgf..................................gvnlrdvakenglllevdpealdeskrldedkldklldalee 66 
                 ll G+pG+GKt la++++ + ++                                  +++  d +    +  + d +++++s+r+++++l +++++ ++
  EPX72686.1 482 LLFGPPGTGKTMLARAVATESKStffsisassltskflgeseklvralftlakklspSIIFVDEIDSLLSARSADGNEHESSRRIKTEFLIQWSSLARA 580
                 689**************6554334567777777778888888885556555555555444444444444444444448889999999999999999999 PP

      AAA_18  67 nss..aleegknlvidg 81 
                 ++s  + +++ +lv+  
  EPX72686.1 581 AASreSADQPRVLVLAA 597
                 88866555555556655 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   2.2e-05     0.016      19     115 ..     436     545 ..     425     551 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 2.2e-05
      DUF815  19 veevdevklddLvgidkqkealvente.qfle.....g..lpannvLLwGarGtGKSslvkallneyaeeg..Lrlievekedlkelpklvellrerpe 107
                 v + dev +dd+ g+++ ke+l+e +   fl+     g  +pa+ +LL+G  GtGK  l +a+ +e +++   +    ++ + l e +klv++l + ++
  EPX72686.1 436 VVKGDEVLWDDIAGLNAAKESLKEAVVyPFLRpdlfqGlrEPARGMLLFGPPGTGKTMLARAVATESKSTFfsISASSLTSKFLGESEKLVRALFTLAK 534
                 556677888889999999998888764234432222253369************************999984455567888888888888888776666 PP

      DUF815 108 rf...ilfvDD 115
                 ++   i+fvD 
  EPX72686.1 535 KLspsIIFVDE 545
                 54333888886 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   3.6e-05     0.026       5      78 ..     481     551 ..     478     598 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 3.6e-05
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelileklkeekktylflDEiqevpe 78 
                 +++ G+  +GKT+l++ ++ e+    + ++ i+  + + k l ++ekl ++++ ++k+   +++f DEi  + +
  EPX72686.1 481 MLLFGPPGTGKTMLARAVATESK---STFFSISASSLTSKFLGESEKLVRALFTLAKKLSPSIIFVDEIDSLLS 551
                 5789999************9988...999999999988887778889999999987777889*******98755 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.7      0.27   1.9e+02     118     198 ..      63     141 ..      14     161 .. 0.60
   2 ?    9.8   0.0   0.00089      0.64      20      64 ..     481     599 ..     467     615 .. 0.64

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.27
      AAA_11 118 ekeekaqlakeiskeleklakelrafeeeeekeklkkskekskskleqerrklkkerkelskeleeaeesleeevldeaei 198
                   e  + + ++is + ++l++e+  +e+ +++ k+++ +++++ k+e  + + k  ++  +++ ++a+ +++++  +++++
  EPX72686.1  63 YTEALVCMLEQISTQVDQLRNEVVLQEAAFQQLKSHQPANYTAYKEE--EGATKHLSRGSRERQRSATGTMQSNASSSSQV 141
                 33336777888888888888888888888765333333333333322..22233333333444444455555554444444 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00089
      AAA_11  20 tliqGPPGtgKTktivellsqll...........................................................sr............... 44 
                  l+ GPPGtgKT    ++  +                                                             sr               
  EPX72686.1 481 MLLFGPPGTGKTMLARAVATESKstffsisassltskflgeseklvralftlakklspsiifvdeidsllsarsadgnehesSRriktefliqwsslar 579
                 5889********888888888876666777777777777776666666666666666666666666666655555555444400344444444444443 PP

      AAA_11  45 rkseeeksakpriLvCapSN 64 
                 ++ ++e + +pr+Lv a +N
  EPX72686.1 580 AAASRESADQPRVLVLAATN 599
                 22566667777777777776 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   0.00014       0.1      24      54 ..     469     499 ..     463     504 .. 0.86
   2 ?   -1.0   0.0       1.6   1.1e+03     143     178 ..     538     580 ..     518     582 .. 0.60

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00014
      AAA_25  24 wlvkgllpagelallaGapgtGKttlaldla 54 
                 +l++gl+      ll+G+pgtGKt+la  +a
  EPX72686.1 469 DLFQGLREPARGMLLFGPPGTGKTMLARAVA 499
                 6888998888999*************97766 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 1.6
      AAA_25 143 vrlvviDplsralgg...densnsd...v.galvealeriarr 178
                 +  + +D ++++l++   d n+++    + ++++ ++ ++ar+
  EPX72686.1 538 PSIIFVDEIDSLLSArsaDGNEHESsrrIkTEFLIQWSSLARA 580
                 5666666665555554434443333333578888888888775 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1       1.7   1.2e+03      65     113 ..      14      59 ..       3      71 .. 0.75
   2 ?   11.7   0.0   0.00019      0.14      31      65 ..     476     510 ..     469     535 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 1.7
       AAA_7  65 ltinfsaqtsanqlqdiiesklekrrkgvygPpggkklvvFvDDlnmpa 113
                 +++ +++q s+  +  i++  +ek +++++  p  + +   +DDln  +
  EPX72686.1  14 AKVALHKQKSSDYVDAIVM--FEKAKQNILDNPSFQFCKDTIDDLNP-E 59 
                 5666677777777777765..789999999999999999999**994.3 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 0.00019
       AAA_7  31 knkkpvllvGptGtGKtviikdllkkldkekylsl 65 
                 +  + +ll Gp GtGKt++++ + ++ +++ +++ 
  EPX72686.1 476 EPARGMLLFGPPGTGKTMLARAVATESKSTFFSIS 510
                 556789***************98877764444333 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1       3.3   2.4e+03      45      94 ..      42      94 ..      28     112 .. 0.59
   2 ?   12.1   0.0   0.00017      0.12       5      37 ..     481     515 ..     478     571 .. 0.69

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 3.3
      AAA_24 45 dieswedfldevvel...aaeladyktlviDtideleelclaevirqnekaes 94
                d +s++ ++d+++ l   ++++ +  +  +  i+  +++ ++ev  q  ++++
  EPX72686.1 42 DNPSFQFCKDTIDDLnpeERQYTEALVCMLEQISTQVDQLRNEVVLQEAAFQQ 94
                44578888888888844444555555555666666666666666666555544 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 0.00017
      AAA_24   5 iliyGpsgiGKTtlakel..gpkplfidtekGlks 37 
                 +l++Gp+g+GKT+la+    + k  f+ + +++  
  EPX72686.1 481 MLLFGPPGTGKTMLARAVatESKSTFFSISASSLT 515
                 79*************99988666666666665544 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.0    0.0056         4      36      59 ..     479     502 ..     468     515 .. 0.81
   2 ?    3.4   0.0     0.061        44     105     137 ..     523     555 ..     509     567 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0056
        TniB  36 pnlllvGdsnnGKtmivekFarlh 59 
                 + +ll+G++ +GKtm+++  a + 
  EPX72686.1 479 RGMLLFGPPGTGKTMLARAVATES 502
                 789*************99877665 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.061
        TniB 105 skleqqvlrllrelkvrvLiiDEihnllagsar 137
                 +kl ++  +l ++l++ ++ +DEi++ll++++ 
  EPX72686.1 523 EKLVRALFTLAKKLSPSIIFVDEIDSLLSARSA 555
                 567777889999****************98765 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00032      0.23       3      25 ..     481     503 ..     479     510 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00032
                 EEEEC-TTTCHHHHHHHHHHHHC CS
       NACHT   3 vilqGeaGsGKTtLlqklalawa 25 
                 ++l G++G GKT+L++ +a++ +
  EPX72686.1 481 MLLFGPPGTGKTMLARAVATESK 503
                 7899**************98765 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       3.4   2.4e+03     139     162 ..     451     474 ..     446     479 .. 0.87
   2 ?   10.4   0.0   0.00053      0.38      25      62 ..     481     515 ..     474     550 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 3.4
                      EEESS-HHHHHHTTSS-HHHHHHH CS
  Sigma54_activat 139 aatnedleeaveegkfredLyyrl 162
                       a++e+l+eav    +r dL+  l
       EPX72686.1 451 NAAKESLKEAVVYPFLRPDLFQGL 474
                      68999***************9876 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00053
                      EEEECSTTSSHHHHHHHHHHHSTTTTS-EEEEETTTS- CS
  Sigma54_activat  25 vlitGesGtGKellaraiheaskrkekpfvavncaaip 62 
                      +l+ G  GtGK++lara+ ++sk   + f ++  ++++
       EPX72686.1 481 MLLFGPPGTGKTMLARAVATESK---STFFSISASSLT 515
                      799**************998877...556666666554 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.2         1   7.5e+02      52     116 ..      59     123 ..       4     134 .. 0.55
   2 ?    9.3   0.0    0.0021       1.5      14      42 ..     481     509 ..     476     638 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 1
                 B-HHHCCHCEEEE-SS--S-TTSBHHHHHHHTCHHHHHHHSTTGGTTCBGESTTS...GGS-HHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxx RF
    ABC_tran  52 qeleslrkeigvlpqepqlfpeltvrenesdeeiekalsklglkelkdtvvkssp...ssLSgGqkqr 116
                 +e++ +++ + +l+q ++  ++l+++   +++ ++++ s+   ++++ +         ++LS G ++r
  EPX72686.1  59 EERQYTEALVCMLEQISTQVDQLRNEVVLQEAAFQQLKSHQPANYTAYKEE---EgatKHLSRGSRER 123
                 333333333333333333333332222233333333333333333333333...14458899998877 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.0021
                 EEEEESTTSSHHHHHHHHTTSS--SEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  14 vaivGenGaGKStLlkllagllkpteGei 42 
                 + ++G+ G+GK+ L++++a ++k t  +i
  EPX72686.1 481 MLLFGPPGTGKTMLARAVATESKSTFFSI 509
                 5799****************999876666 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00046      0.33      23      43 ..     482     502 ..     473     555 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00046
                 EEE--TTSSTTHHHHHHHHHH CS
        PhoH  23 faiGpaGtGKtylavalavea 43 
                   +Gp GtGKt+la a+a e 
  EPX72686.1 482 LLFGPPGTGKTMLARAVATES 502
                 579*************99875 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       4.1     3e+03      71     135 ..     385     453 ..     372     468 .. 0.60
   2 ?    7.6   0.0     0.003       2.1      19      38 ..     478     497 ..     455     506 .. 0.82
   3 ?    0.2   0.0      0.56     4e+02     102     133 ..     520     552 ..     498     569 .. 0.71

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 4.1
      ATPase  71 Gwdlekleeegklaiidasesaeesaee..kdkedleelieelae.aikeika..krvviDsitglayee 135
                 Gwd+    e+   + +  + ++++  ++  +   +  e+ eel + +++ei +    v+ D i+gl + +
  EPX72686.1 385 GWDVSSSTEKVANTNMGPFPETNTLRSReeQVLHECPEIEEELGRnILREIVVkgDEVLWDDIAGL-NAA 453
                 777776666655555555554444333334566677777777754145666654467888888888.333 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.003
      ATPase  19 grvvlitGepGtGKtifalq 38 
                 +r +l+ G pGtGKt++a  
  EPX72686.1 478 ARGMLLFGPPGTGKTMLARA 497
                 5779*************976 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.56
      ATPase 102 edleelieelaeaikeikakrvviDsitgl.ay 133
                  + e+l++ l +  k++  + + +D i++l + 
  EPX72686.1 520 GESEKLVRALFTLAKKLSPSIIFVDEIDSLlSA 552
                 456788888888888888888888888888433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (726 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       881  (0.0491383); expected 358.6 (0.02)
Passed bias filter:                      536  (0.0298957); expected 358.6 (0.02)
Passed Vit filter:                        82  (0.0045736); expected 17.9 (0.001)
Passed Fwd filter:                        27  (0.00150594); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              25  [number of targets reported over threshold]
# CPU time: 0.77u 0.30s 00:00:01.07 Elapsed: 00:00:00.47
# Mc/sec: 4636.84
//
Query:       EPX72687.1  [L=511]
Description: alpha,alpha-trehalose-phosphate synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   7.7e-201  667.9   0.0   8.9e-201  667.6   0.0    1.0  1  Glyco_transf_20  Glycosyltransferase family 20
    0.00077   19.9   0.0     0.0026   18.2   0.0    1.9  1  Glyco_trans_1_4  Glycosyl transferases group 1
  ------ inclusion threshold ------
      0.012   15.2   1.1        1.8    8.1   0.1    3.6  3  Glycos_transf_1  Glycosyl transferases group 1


Domain annotation for each model (and alignments):
>> Glyco_transf_20  Glycosyltransferase family 20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  667.6   0.0  1.5e-204  8.9e-201       2     473 ..      21     483 ..      20     484 .. 0.98

  Alignments for each domain:
  == domain 1  score: 667.6 bits;  conditional E-value: 1.5e-204
                      -EEEEEEE-SECEEE-S.SCG..EEECCGSSHHHHHCCCHHCCC-EEEEEEECCES-CCC..HCCCCHHHCCCCCEEEEEE-HHHHHHHCCCHH CS
  Glyco_transf_20   2 klvvvsnrlplklereseeekeeyelkkssgglvsalkglkeetevvwvgwlgvevdeseeakekvskeleekfsvvpvflsdekveeyyngfs 95 
                      +lvvvsnrlp++++r++ +++  y++++ssgglvsal+glk+ ++++w+gw+g e++e+e  k ++ ++l++++s++pvfl+de ++++yngfs
       EPX72687.1  21 RLVVVSNRLPITIKRKD-NGT--YDFSMSSGGLVSALSGLKKLMTFQWLGWCGQEIPEEE--KPMIVERLQNEYSAIPVFLDDELADRHYNGFS 109
                      789*************8.888..*************************************..99****************************** PP

                      HHCHHHHHTT-GG....G----HHHHHHHHHHHHHHHHHHHCC--TT-EEEEESGGGTTHHHHHHHCCTT....SEEEEEE-S----HHHHTTS CS
  Glyco_transf_20  96 ksvLWpllHYklpdsseekefersawdaYvkvnklFAdkiveeikdgdliwvhDYhLmllPellRkkled....akigfflHiPFPsseifriL 185
                      +s+LWpl+HY++     e  f++++w+aY+k+n +FA++ive ++dgdliwv+DYhLm+lP+llR+ + +    +kig+flH+PFPssei+r+L
       EPX72687.1 110 NSILWPLFHYHPG----EISFDEENWEAYKKANMAFAEAIVESLRDGDLIWVQDYHLMMLPQLLRELIGNklknIKIGWFLHTPFPSSEIYRVL 199
                      *************....************************************************988777777******************** PP

                      TTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSSEEEECTTEEEEETTEEEEEEE------HHHHHHHCCSCHHHHHHHHHHHHT.TTSEEE CS
  Glyco_transf_20 186 pvreeilegllgadliGFhtedyarhFlsccsrllgleveskrggveykgrkvsvkalpigidverlesalkkesvsekvkelkerfenkkkli 279
                      pvr+eileg+l++dl+GFht+dyarhFls+csr+lgl++ ++  gvey+g+ vsv+ +pigid+e++++al++++v+e++  ++ r+++ +k+i
       EPX72687.1 200 PVRNEILEGVLNCDLVGFHTYDYARHFLSACSRILGLSTLPN--GVEYNGQMVSVGTFPIGIDPEKFADALRSDAVQERITTVERRLQG-VKVI 290
                      ******************************************..8******************************************99.8*** PP

                      EEEEEC-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEEEEB-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEEES---HHHHHHHHHH- CS
  Glyco_transf_20 280 lgvDrlDyikGvkqkllaferfLeeypelrgkvvlvqiavpsredveeyqelekeveelvgrINgefgtldytPvvylersldfeeliallaaa 373
                      +gvDrlDyikGv+qk++afe fLe+ype+ gkvvlvq+avpsr+dveeyq+l++ v+elvgrINg+fgt++ytP+++l++s+ feel+al++++
       EPX72687.1 291 VGVDRLDYIKGVPQKFHAFEVFLEQYPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGRFGTIEYTPIHFLHKSVRFEELAALYNIS 384
                      ********************************************************************************************** PP

                      SEEEE--SSBSS-CHHHHHHHCSTTT--EEEEETTBGGGGT-TTTSEEE-TT-HHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHT-HHHHHHH CS
  Glyco_transf_20 374 dvllvtslRdGmnlvakeyvvcqqekkgvLiLSeFaGaaqsLkdaailvNPwdieevaeaikeaLkmseeerkkrekkllkqvskhdvqsWaes 467
                      dv+l+ts+RdGmnlv++ey+ +qq+++g+LiLSeFaGaaqsL+ ++i++NPw++ee+a+ai+eaL++++++r+ +++kl+++vsk+++q W +s
       EPX72687.1 385 DVCLITSTRDGMNLVSYEYICTQQQRHGALILSEFAGAAQSLN-GSIVINPWNTEELANAIHEALTLPDNQREANQQKLYRYVSKYTSQFWGQS 477
                      *******************************************.78************************************************ PP

                      HHHHHH CS
  Glyco_transf_20 468 flselk 473
                      f+ el+
       EPX72687.1 478 FVGELQ 483
                      **9997 PP

>> Glyco_trans_1_4  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   4.4e-07    0.0026      15     132 ..     307     448 ..     288     449 .. 0.66

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 4.4e-07
                      GTHHHHHHHHHHHH.HHEEEEEES---........HHHHHHHTT-................T.TEEEE---...THHHHHHHH-SEEEE--..- CS
  Glyco_trans_1_4  15 kgvdllleavpllrkkdvrlvivGdgp.rp.....eeleelaagl................eerveftGfv...edlaellaaadvfvaPs..e 81 
                      ++++++le+ p+   k v lv v   p r+     ++l++    +                   ++f+ +    e+la+l++ +dv++++s   
       EPX72687.1 307 HAFEVFLEQYPEWVGK-VVLVQVA-VPsRQdveeyQNLRA----VvnelvgringrfgtieYTPIHFLHKSvrfEELAALYNISDVCLITStrD 394
                      5566667777666655.4444444.232221222333332....12222444455555443233777776669999***************966 PP

                      --SHHHHHHHHTT-....EEEE-TGGGTTT--TTSS.EE--TT-HHHHHHHHHHHH CS
  Glyco_trans_1_4  82 gfglkllEamaagl....pvVatdvggiaevvgeng.llvppgdpealaeailrLl 132
                      g++l+ +E+   +     + + ++ +g+a+    ng ++++p ++e+la+ai + l
       EPX72687.1 395 GMNLVSYEYICTQQqrhgALILSEFAGAAQ--SLNGsIVINPWNTEELANAIHEAL 448
                      ********9875432233788888888888..66775888************9887 PP

>> Glycos_transf_1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0     0.058   3.5e+02      78     104 ..     121     148 ..     118     149 .. 0.89
   2 ?    1.6   0.0     0.029   1.7e+02      13      49 ..     285     320 ..     274     349 .. 0.84
   3 ?    8.1   0.1   0.00029       1.8      83     164 ..     374     456 ..     361     464 .. 0.69

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.058
                      EECCH.SSSHHHHHHCESEEEEEESSBS CS
  Glycos_transf_1  78 lgevs.redleellknadifvlpsisEg 104
                       ge+s +e+ +e +k+a+++++ +i E+
       EPX72687.1 121 PGEISfDEENWEAYKKANMAFAEAIVES 148
                      6899999**************9999986 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.029
                      TT-EEEEEESS-TTTTTHHHHHHHHHCCCCCHCSCEE CS
  Glycos_transf_1  13 ekkkiilsvgrlekeKgvdllikafallkkqlnpnvk 49 
                      ++ k+i+ v rl++ Kgv +  +af+ + +q  p+++
       EPX72687.1 285 QGVKVIVGVDRLDYIKGVPQKFHAFEVFLEQ-YPEWV 320
                      56789999*******************9998.77775 PP

  == domain 3  score: 8.1 bits;  conditional E-value: 0.00029
                      SSSHHHHHHCESEEEEEESSBSS-HHHHHHHHTT-....-EEEETTTTHCHHCHTTT..SEEEE-TT.-HHHHHHHHHHHHHSHHHHHH CS
  Glycos_transf_1  83 redleellknadifvlpsisEgfGivllEAmaagl....pviasnaggpaevvkdge..tGllvkpn.naealaeairklledeelrer 164
                       e+l +l++++d+ +++s+++g+ +v +E++        + i s   g+a      +  +G +v ++ n e+la+ai ++l+ ++ +++
       EPX72687.1 374 FEELAALYNISDVCLITSTRDGMNLVSYEYICTQQqrhgALILSEFAGAA------QslNGSIVINPwNTEELANAIHEALTLPDNQRE 456
                      68999***********************9976554111144444433333......344677777777999999999999998844443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (511 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       607  (0.0338558); expected 358.6 (0.02)
Passed bias filter:                      573  (0.0319594); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.28s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 3413.01
//
Query:       EPX72688.1  [L=509]
Description: ariadne [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.2e-22   79.0  47.0    6.1e-11   42.4   5.3    4.6  4  IBR           IBR domain, a half RING-finger domain
    1.6e-05   24.6   3.5    1.6e-05   24.6   3.5    4.5  4  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
    0.00052   19.8   5.0    0.00052   19.8   5.0    5.0  4  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
      0.009   16.3   4.8      0.009   16.3   4.8    4.5  4  zf-RING_2     Ring finger domain
  ------ inclusion threshold ------
      0.013   15.6   5.3      0.013   15.6   5.3    3.8  3  zf-RING_UBOX  RING-type zinc-finger
      0.014   15.4   6.4      0.014   15.4   6.4    4.2  4  zf-RING_5     zinc-RING finger domain
       0.63    9.9  36.4      0.032   14.1   3.9    4.4  4  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)


Domain annotation for each model (and alignments):
>> IBR  IBR domain, a half RING-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   4.2     0.044   1.1e+02      41      55 ..     149     163 ..     117     167 .. 0.74
   2 !   11.7   0.7   9.2e-05      0.24       3      34 ..     161     191 ..     161     205 .. 0.80
   3 !   42.4   5.3   2.4e-14   6.1e-11       2      62 .]     203     269 ..     202     269 .. 0.88
   4 !   37.3  17.0   9.4e-13   2.4e-09      12      58 ..     286     333 ..     277     339 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.044
         IBR  41 CskCgfefCfnCkke 55 
                  ++C ++fC++C + 
  EPX72688.1 149 SADCDHDFCLSCYQH 163
                 46799*******875 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 9.2e-05
         IBR   3 yeklklkkslesdpnlkwCprpdCeaiiekse 34 
                 y++++  + +++ +++++Cp+ +C++ii++++
  EPX72688.1 161 YQHYLVSR-IQEGETMIQCPEEGCSQIISQQS 191
                 55666666.899999*************8876 PP

  == domain 3  score: 42.4 bits;  conditional E-value: 2.4e-14
         IBR   2 kyeklklkkslesdpnlkwCprpdCeaiieksegcks.......vtCskCgfefCfnCkkewHeglsC 62 
                 +y +l+ +++++++  ++wCp+pdC ++ie    ++s       vtC  Cg++fCf C+++ H+++ C
  EPX72688.1 203 QYCRLLDRSFVDDNDLFRWCPAPDCPYAIECHVAQSSlntvvptVTCL-CGKQFCFGCGRDNHQPAIC 269
                 5888999999*99999*************777775555667888****.***************9887 PP

  == domain 4  score: 37.3 bits;  conditional E-value: 9.4e-13
         IBR  12 les.dpnlkwCprpdCeaiieksegcksvtCskCgfefCfnCkkew..He 58 
                  ++ + n+k Cp  +C++ iek+ gc+++tC+kC++e+C+ C+ +w  H+
  EPX72688.1 286 ANWiHANTKECP--KCSTTIEKNGGCNHMTCKKCKYEYCWVCLGPWseHG 333
                 4566889*****..********************************6554 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   3.5   6.4e-09   1.6e-05       1      39 [.     136     179 ..     136     180 .. 0.90
   2 ?    0.0   4.5      0.31   8.1e+02      12      31 ..     247     265 ..     233     271 .. 0.72
   3 ?    2.5   0.4     0.051   1.3e+02      28      41 .]     287     299 ..     285     299 .. 0.81
   4 ?   -0.9  13.0      0.62   1.6e+03       1      26 [.     296     318 ..     296     340 .. 0.77

  Alignments for each domain:
  == domain 1  score: 24.6 bits;  conditional E-value: 6.4e-09
                 -TTT-S--SS-E.E-TTS--B-CHHHHHHHHC.....TSSB--T CS
    zf-C3HC4   1 CpiCleeakepnelleCkHsfCskCirkilks.....rkkvkCP 39 
                 C+iC++  k p  + +C+H fC +C++++l s     ++  +CP
  EPX72688.1 136 CSICFDDGKLPFFSADCDHDFCLSCYQHYLVSriqegETMIQCP 179
                 *****************************999887776667788 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.31
                 E.E-TTS--B-CHHHHHHHH CS
    zf-C3HC4  12 nelleCkHsfCskCirkilk 31 
                 + +  C+ +fC+ C r   +
  EPX72688.1 247 V-TCLCGKQFCFGCGRDNHQ 265
                 3.778*********876555 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.051
                 HHHHCTSSB--TTT CS
    zf-C3HC4  28 kilksrkkvkCPlC 41 
                 +++   ++++CP+C
  EPX72688.1 287 NWIH-ANTKECPKC 299
                 6777.78888**** PP

  == domain 4  score: -0.9 bits;  conditional E-value: 0.62
                 -TTT-S--SS-E.E-TTS--B-CHHH CS
    zf-C3HC4   1 CpiCleeakepnelleCkHsfCskCi 26 
                 Cp C ++++++     C+H  C+kC 
  EPX72688.1 296 CPKCSTTIEKNG---GCNHMTCKKCK 318
                 999999999998...77777777774 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   5.0     2e-07   0.00052       2      32 ..     136     166 ..     135     180 .. 0.92
   2 !    8.3   5.7   0.00079         2       1      39 [.     232     271 ..     232     271 .. 0.79
   3 ?    1.3   1.0      0.13   3.2e+02      32      40 .]     290     299 ..     278     299 .. 0.76
   4 ?   -3.3  14.5       3.3   8.4e+03       2      27 ..     296     318 ..     295     333 .. 0.81

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 2e-07
  zf-C3HC4_2   2 CpiCldmlkdpsvvtpCgHvfCqkCilrsLe 32 
                 C iC+d  k p  ++ C H fC +C + +L 
  EPX72688.1 136 CSICFDDGKLPFFSADCDHDFCLSCYQHYLV 166
                 **************************99885 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00079
  zf-C3HC4_2   1 kCpiCldmlkd..psvvtpCgHvfCqkCilrsLeekn.eCPl 39 
                 +C++ + +l++  p+v+  Cg +fC  C +    ++   CPl
  EPX72688.1 232 ECHVAQSSLNTvvPTVTCLCGKQFCFGCGRDN--HQPaICPL 271
                 588888888874467777************96..44459996 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.13
  zf-C3HC4_2  32 eekn.eCPlC 40 
                 +++  eCP+C
  EPX72688.1 290 HANTkECPKC 299
                 44445***** PP

  == domain 4  score: -3.3 bits;  conditional E-value: 3.3
  zf-C3HC4_2   2 CpiCldmlkdpsvvtpCgHvfCqkCi 27 
                 Cp C   +++      C+H +C+kC 
  EPX72688.1 296 CPKCSTTIEKN---GGCNHMTCKKCK 318
                 77788888763...68*********6 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   4.8   3.5e-06     0.009       2      41 ..     135     179 ..     134     183 .. 0.80
   2 !    6.3   5.5    0.0047        12       2      42 ..     232     271 ..     231     271 .. 0.72
   3 ?    2.0   0.7      0.11   2.7e+02      32      43 ..     287     299 ..     277     300 .. 0.77
   4 ?    0.4  13.4      0.34   8.8e+02       2      39 ..     295     335 ..     294     340 .. 0.70

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 3.5e-06
   zf-RING_2   2 eCpICleelssadsvl.llpCgHvfhreClerwlrssst.......CP 41 
                 +C+IC+++    + +    +C H f+ +C +++l s+++       CP
  EPX72688.1 135 TCSICFDDG---KLPFfSADCDHDFCLSCYQHYLVSRIQegetmiqCP 179
                 7****7444...44443448*************999998888899998 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0047
   zf-RING_2   2 eCpICleelssadsvlllpCgHvfhreClerwlrssst.CPl 42 
                 eC + +++l++   ++++ Cg+ f++ C ++  ++++  CPl
  EPX72688.1 232 ECHVAQSSLNTVVPTVTCLCGKQFCFGCGRD--NHQPAiCPL 271
                 6888888886666666556*********988..445557996 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.11
   zf-RING_2  32 rwlrssst.CPlC 43 
                 +w++ + + CP C
  EPX72688.1 287 NWIHANTKeCPKC 299
                 687766667**** PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.34
   zf-RING_2   2 eCpICleelssads...vlllpCgHvfhreClerwlrssst 39 
                 eCp C   ++++     +++++C++ +++ Cl  w ++  +
  EPX72688.1 295 ECPKCSTTIEKNGGcnhMTCKKCKYEYCWVCLGPWSEHGTN 335
                 899998888666552324444698899*******9987655 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.6   5.3   4.9e-06     0.013       1      39 []     136     179 ..     136     179 .. 0.85
   2 ?   -6.2   6.2         7   1.8e+04       1      25 [.     233     260 ..     233     270 .. 0.59
   3 ?   -1.5   8.0         1   2.7e+03       1      25 [.     296     318 ..     296     343 .. 0.67

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 4.9e-06
  zf-RING_UBOX   1 CpIClelftdPlv.l.pCGHtFCreClw....elskslegafkCP 39 
                   C+IC+++ + P +    C H FC +C +       + +e+ ++CP
    EPX72688.1 136 CSICFDDGKLP-FfSaDCDHDFCLSCYQhylvSRIQEGETMIQCP 179
                   ******9999*.54559**********656777888888889998 PP

  == domain 2  score: -6.2 bits;  conditional E-value: 7
  zf-RING_UBOX   1 CpIClelft..dPlv..lpCGHtFCreCl 25 
                   C + +++++   P+v  l CG  FC  C 
    EPX72688.1 233 CHVAQSSLNtvVPTVtcL-CGKQFCFGCG 260
                   666666666555633133.9888999885 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 1
  zf-RING_UBOX   1 CpIClelftdPlvl.pCGHtFCreCl 25 
                   Cp C  + +   +  +C H  C++C 
    EPX72688.1 296 CPKCSTTIE---KNgGCNHMTCKKCK 318
                   777776664...32269999999985 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   6.4   5.4e-06     0.014       2      42 ..     136     183 ..     135     185 .. 0.92
   2 ?   -1.0   5.3      0.69   1.8e+03      17      41 ..     248     271 ..     232     273 .. 0.76
   3 ?    1.6   0.5      0.11   2.8e+02      33      43 ..     287     300 ..     277     301 .. 0.65
   4 ?   -3.9  12.8       5.5   1.4e+04       2      28 ..     296     317 ..     295     331 .. 0.67

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 5.4e-06
   zf-RING_5   2 CnkCfeklskeekfyltsCgHifCekClkkll.......ekeavCpi..C 42 
                 C++Cf+    + +f+   C H fC +C +++l       e + +Cp   C
  EPX72688.1 136 CSICFDDG--KLPFFSADCDHDFCLSCYQHYLvsriqegETMIQCPEegC 183
                 ******99..****************************999****97666 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.69
   zf-RING_5  17 ltsCgHifCekClkkllekeavCpi 41 
                 +  Cg  fC  C + +  ++a Cp+
  EPX72688.1 248 TCLCGKQFCFGCGRDNH-QPAICPL 271
                 4459************9.9****95 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.11
   zf-RING_5  33 l...ekeavCpiCr 43 
                     ++ ++Cp C+
  EPX72688.1 287 NwihANTKECPKCS 300
                 366677899****7 PP

  == domain 4  score: -3.9 bits;  conditional E-value: 5.5
   zf-RING_5   2 CnkCfeklskeekfyltsCgHifCekC 28 
                 C+kC++ ++k+       C H+ C+kC
  EPX72688.1 296 CPKCSTTIEKNG-----GCNHMTCKKC 317
                 899999995554.....4666666666 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   3.9   1.2e-05     0.032       2      41 ..     133     179 ..     132     189 .. 0.76
   2 ?   -1.4   5.9      0.84   2.2e+03      15      41 ..     246     270 ..     231     279 .. 0.77
   3 ?    3.3   5.5     0.029        73      30      49 ..     286     305 ..     254     306 .. 0.65
   4 ?    5.0   5.3    0.0084        21      20      46 ..     309     328 ..     307     332 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 1.2e-05
                 GSB-TTTSSSBS-EEET.TEEEEEE-HHHHHHHHH.......TT-B-T CS
  zf-C3HC4_3   2 deeCviClerprnvvll.pCgHlvlCeeCaekllk.......rkkkCp 41 
                 + +C+iC++  +  ++  +C H  +C +C +++l           +Cp
  EPX72688.1 133 EGTCSICFDDGKLPFFSaDCDHD-FCLSCYQHYLVsriqegeTMIQCP 179
                 679*******999888847****.********9865565555455555 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.84
                 EEETTEEEEEE-HHHHHHHHHTT-B-T CS
  zf-C3HC4_3  15 vvllpCgHlvlCeeCaekllkrkkkCp 41 
                 +v + Cg + +C  C ++   + + Cp
  EPX72688.1 246 TVTCLCGKQ-FCFGCGRDN-HQPAICP 270
                 566679***.*****9988.5677777 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.029
                 HHHHHHTT-B-TTT--B--E CS
  zf-C3HC4_3  30 aekllkrkkkCpiCrrpiek 49 
                 a+++++++k+Cp C + iek
  EPX72688.1 286 ANWIHANTKECPKCSTTIEK 305
                 344555**********9986 PP

  == domain 4  score: 5.0 bits;  conditional E-value: 0.0084
                 EEEEEE-HHHHHHHHHTT-B-TTT--B CS
  zf-C3HC4_3  20 CgHlvlCeeCaekllkrkkkCpiCrrp 46 
                 C+H+ +C++C  ++      C +C  p
  EPX72688.1 309 CNHM-TCKKCKYEY------CWVCLGP 328
                 ****.******999......9999766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (509 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1299  (0.0724525); expected 358.6 (0.02)
Passed bias filter:                      464  (0.0258799); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.64u 0.30s 00:00:00.94 Elapsed: 00:00:00.52
# Mc/sec: 2928.61
//
Query:       EPX72689.1  [L=1233]
Description: karyopherin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.6e-18   65.7   1.6    4.6e-18   65.7   1.6    3.2  3  Xpo1      Exportin 1-like protein
  ------ inclusion threshold ------
        2.7    8.3   8.2         21    5.5   0.0    3.9  4  KAR       Kidney androgen-regulated


Domain annotation for each model (and alignments):
>> Xpo1  Exportin 1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.7   1.6   5.2e-22   4.6e-18       3     149 .]     115     281 ..     113     281 .. 0.94
   2 ?   -2.5   0.5      0.53   4.7e+03      23     116 ..     458     553 ..     451     578 .. 0.64
   3 ?   -2.0   0.1      0.37   3.3e+03     122     146 ..    1042    1066 ..    1037    1068 .. 0.82

  Alignments for each domain:
  == domain 1  score: 65.7 bits;  conditional E-value: 5.2e-22
                 HHHHHHHHHHHHHHHHHT.TTTSTTHHHHHHHHHCT..HHHHHHHHHHHHHHHHHHHTSHT..TTSCHHH.HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        Xpo1   3 flrnklaealaelflqey.pnnWpsffddllsllss.spsglelllriLkvlpeEiadfsr..skleqer.rndlkdllrsnvqkilelllqileqsqs 96 
                 ++r+kla +++e++++++  + W++ fd +l++l++ + ++ +l   iL+ ++e++++++    +l+++   n+l   l+s+ q +++l+ + l +s+s
  EPX72689.1 115 YVRSKLASVFIEIVKRDWySHIWREQFDLFLQSLWNmNVEHRQLSSFILRGIMEDLYQYDDpvASLRSHIlFNALISILSSS-QSLHKLYPSGLPYSVS 212
                 89****************6678*********9999989********************877778888888888888888887.**************** PP

                 CC..............HHHHHHHHHHHHHHHHTTTS-HHHHHTSCHHHHHHHHC..CSCCCHHHHHHHH CS
        Xpo1  97 kk..............qsselveavLkclsswvswidiglivnnpllnllfqlL..sdpelreaavecL 149
                  +              +s++ + ++Lkc++s++sw+ ++ i++ +++  ++++L  ++ +l+++a++c+
  EPX72689.1 213 IPennegwlnrwsamlESESDALESLKCFKSCLSWVATDSIIEANIVARICNILvnGPIQLKTHAIDCI 281
                 999****************************************************999**********7 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.53
                 TSTTHHHHHHHHHCT....HHHHHHHHHHHHHHHHHHHTSHTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTT CS
        Xpo1  23 nWpsffddllsllsss...psglelllriLkvlpeEiadfsrskleqerrndlkdllrsnvqkilelllqileqsqskkqsselveavLkclsswvs 116
                 n++ f+ d+++l+ s    +s   +  ++ ++l   i+++++++  +++++ +   ++  +++i  +l  i  +++++ + + + e +L+ l  w++
  EPX72689.1 458 NYRRFMFDIVRLTVSIkplESLSWVQNNFQNILVNNIGQIQSQSSFSSKTTPVYLIMDMGFSTIEASLHGIT-RWNENVTDNATYELILQSLFLWCK 553
                 667777777765544224455555666666677777777777777777777777777777777766666555.444445677777777777777776 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 0.37
                  HHHTSCHHHHHHHHCCSCCCHHHHH CS
        Xpo1  122 livnnpllnllfqlLsdpelreaav 146 
                   i+ +pll++l++lL   ++r+ ++
  EPX72689.1 1042 AIICEPLLSTLCHLLAVHDSRTVTI 1066
                  567789*********9888887765 PP

>> KAR  Kidney androgen-regulated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.0    0.0024        21      16      33 ..     640     657 ..     627     663 .. 0.89
   2 ?    5.1   0.0     0.003        27      15      53 ..     707     747 ..     702     756 .. 0.86
   3 ?   -1.1   0.6      0.26   2.3e+03      39      79 ..     991    1022 ..     974    1037 .. 0.59
   4 ?   -3.5   0.1       1.4   1.3e+04      14      38 ..    1097    1121 ..    1093    1155 .. 0.55

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0024
         KAR  16 siidllnsvsdqlasyeg 33 
                  i+d l s+ dql++y +
  EPX72689.1 640 NIFDQLQSTIDQLGTYTT 657
                 59**************75 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.003
         KAR  15 dsiidllnsvsd.qlasyegskaple.dstddelstdseqi 53 
                 +s +++ln v   q+a y  +k p + d+t+ el+td+  +
  EPX72689.1 707 NSPMEFLNHVKLpQMADYLFAKYPYNaDYTKYELDTDACSF 747
                 678899**99988***********755**********7654 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 0.26
         KAR   39 edstddelstdseqimdttyakskqiselstdvetvsssfl 79  
                     t+  ++  +e ++++t+++s+          t+ss f+
  EPX72689.1  991 RHLTYATSKLITETFLQITPTQSR---------STISSDFV 1022
                  445555555556666666666554.........23333333 PP

  == domain 4  score: -3.5 bits;  conditional E-value: 1.4
         KAR   14 qdsiidllnsvsdqlasyegskapl 38  
                  q  i+ + +s ++q+ s  +  a +
  EPX72689.1 1097 QTVIMAINDSYFEQMQSDFARLACI 1121
                  6667777777777777655444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1233 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       632  (0.0352502); expected 358.6 (0.02)
Passed bias filter:                      421  (0.0234815); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.84u 0.30s 00:00:01.13 Elapsed: 00:00:00.52
# Mc/sec: 7095.18
//
Query:       EPX72690.1  [L=582]
Description: zinc finger protein Cps3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.7e-11   42.2   8.8    1.5e-06   27.9   1.1    2.3  2  zf-CCCH_4  CCCH-type zinc finger
    1.7e-08   34.3  19.2    0.00012   22.0   3.5    2.3  2  zf_CCCH_4  Zinc finger domain
      1e-07   32.6   6.8     0.0012   19.6   0.7    2.7  2  Torus      Torus domain
    3.8e-07   30.3   1.8    3.8e-07   30.3   1.8    1.7  2  zf-CCCH_3  Zinc-finger containing family
    1.1e-06   28.3  10.9     0.0056   16.6   1.4    2.3  2  zf-CCCH    Zinc finger C-x8-C-x5-C-x3-H type (and similar)
  ------ inclusion threshold ------
       0.41   11.2  16.4      0.078   13.5   3.1    2.4  2  zf-CCCH_2  RNA-binding, Nab2-type zinc finger


Domain annotation for each model (and alignments):
>> zf-CCCH_4  CCCH-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   1.3   3.8e-07    0.0011       1      22 []      39      60 ..      39      60 .. 0.97
   2 !   27.9   1.1   4.9e-10   1.5e-06       2      21 ..      69      88 ..      68      89 .. 0.94

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 3.8e-07
   zf-CCCH_4  1 rlCpyfakGsCrfGdnCrFsHd 22
                ++C++f +G C+ G  C FsHd
  EPX72690.1 39 VPCKFFRQGTCTSGKDCIFSHD 60
                69*******************9 PP

  == domain 2  score: 27.9 bits;  conditional E-value: 4.9e-10
   zf-CCCH_4  2 lCpyfakGsCrfGdnCrFsH 21
                +C+yf+kG+C+fG +C  +H
  EPX72690.1 69 VCKYFQKGNCKFGTKCALEH 88
                8***************9999 PP

>> zf_CCCH_4  Zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   3.5     4e-08   0.00012       1      19 []      41      59 ..      41      59 .. 1.00
   2 !   18.0   7.9   7.2e-07    0.0022       1      15 [.      70      84 ..      70      85 .. 0.98

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 4e-08
   zf_CCCH_4  1 CkfflqGtCkkGdkCrFaH 19
                Ckff qGtC+ G  C F+H
  EPX72690.1 41 CKFFRQGTCTSGKDCIFSH 59
                ******************* PP

  == domain 2  score: 18.0 bits;  conditional E-value: 7.2e-07
   zf_CCCH_4  1 CkfflqGtCkkGdkC 15
                Ck+f++G+Ck+G+kC
  EPX72690.1 70 CKYFQKGNCKFGTKC 84
                *************** PP

>> Torus  Torus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.7   3.9e-07    0.0012      64      93 ..      32      61 ..       3      67 .. 0.81
   2 !   15.4   1.0   7.8e-06     0.023      69      97 ..      66      94 ..      62     102 .. 0.85

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 3.9e-07
                HHHSTT--B-HHHHHT--SSGGG-SSB-S- CS
       Torus 64 adkekesyfClfFarGlCakGkkCeylHrl 93
                a+k+ +++ C fF +G+C++Gk+C + H+l
  EPX72690.1 32 ATKSLQHVPCKFFRQGTCTSGKDCIFSHDL 61
                557788899*******************98 PP

  == domain 2  score: 15.4 bits;  conditional E-value: 7.8e-06
                T--B-HHHHHT--SSGGG-SSB-S---SS CS
       Torus 69 esyfClfFarGlCakGkkCeylHrlPtee 97
                e+++C +F +G C+ G+kC+  H l + +
  EPX72690.1 66 EKTVCKYFQKGNCKFGTKCALEHVLSDGK 94
                6789*******************987655 PP

>> zf-CCCH_3  Zinc-finger containing family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.3   1.8   1.3e-10   3.8e-07       6      71 ..      39     105 ..      34     117 .. 0.84
   2 ?   -4.1   0.0         6   1.8e+04       9      31 ..     488     510 ..     486     512 .. 0.75

  Alignments for each domain:
  == domain 1  score: 30.3 bits;  conditional E-value: 1.3e-10
   zf-CCCH_3   6 ddcyffyystctkGdscpfrhe.eaalGsetvctlWqegrc.lrevckfrhmeidkkrkeipcywenq 71 
                   c ff   tct G  c f h  e+al   tvc+++q+g+c + ++c + h+  d kr ++     + 
  EPX72690.1  39 VPCKFFRQGTCTSGKDCIFSHDlECAL-EKTVCKYFQKGNCkFGTKCALEHVLSDGKRVKTRALTSTT 105
                 56*******************736777.89***********66899******9999998877665555 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 6
   zf-CCCH_3   9 yffyystctkGdscpfrheeaal 31 
                 y+ ++   + G++ + + ++aa+
  EPX72690.1 488 YYAFFERNKEGNNTSTKLSPAAI 510
                 67777888888888888777776 PP

>> zf-CCCH  Zinc finger C-x8-C-x5-C-x3-H type (and similar)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   1.4   1.9e-06    0.0056       3      26 ..      38      60 ..      37      61 .. 0.91
   2 !   16.5   2.5     2e-06    0.0058       4      21 ..      68      84 ..      66      85 .. 0.92

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.9e-06
                CHCBCHHHHHS--TTGGG-SSBSC CS
     zf-CCCH  3 telCrffmrtGyCkyGdrCkFaHg 26
                +++C+ff++ G+C  G  C F+H+
  EPX72690.1 38 HVPCKFFRQ-GTCTSGKDCIFSHD 60
                579**9999.*************6 PP

  == domain 2  score: 16.5 bits;  conditional E-value: 2e-06
                HCBCHHHHHS--TTGGG- CS
     zf-CCCH  4 elCrffmrtGyCkyGdrC 21
                  C++f++ G Ck+G +C
  EPX72690.1 68 TVCKYFQK-GNCKFGTKC 84
                57******.********* PP

>> zf-CCCH_2  RNA-binding, Nab2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   3.1   2.6e-05     0.078       1      17 [.      40      59 ..      40      59 .. 0.99
   2 ?    3.2   5.5     0.046   1.4e+02       2      13 ..      70      84 ..      70      85 .. 0.95

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 2.6e-05
   zf-CCCH_2  1 pCrffpn..C.tnpkCpFaH 17
                pC+ff    C  +++C F+H
  EPX72690.1 40 PCKFFRQgtCtSGKDCIFSH 59
                9******************* PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.046
   zf-CCCH_2  2 Crffpn..C.tnpkC 13
                C++f +  C ++ kC
  EPX72690.1 70 CKYFQKgnCkFGTKC 84
                *************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (582 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       444  (0.0247643); expected 358.6 (0.02)
Passed bias filter:                      247  (0.0137766); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 4091.27
//
Query:       EPX72691.1  [L=289]
Description: methyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-17   64.2   0.0    1.8e-17   63.7   0.0    1.2  1  Methyltransf_16  Lysine methyltransferase
    1.9e-05   24.2   0.0    2.9e-05   23.6   0.0    1.2  1  PrmA             Ribosomal protein L11 methyltransferase (Prm
     0.0093   16.7   0.1      0.027   15.1   0.0    1.9  2  Methyltransf_25  Methyltransferase domain
  ------ inclusion threshold ------
      0.011   15.3   0.0      0.021   14.4   0.0    1.4  1  MTS              Methyltransferase small domain
      0.036   13.9   0.0      0.057   13.3   0.0    1.4  1  Methyltransf_23  Methyltransferase domain
      0.039   13.7   0.0      0.062   13.0   0.0    1.2  1  Met_10           Met-10+ like-protein
      0.062   14.1   0.1        1.7    9.5   0.1    2.8  3  Methyltransf_12  Methyltransferase domain
      0.069   12.9   0.0       0.11   12.2   0.0    1.3  1  PCMT             Protein-L-isoaspartate(D-aspartate) O-methyl
      0.099   13.1   0.0       0.17   12.4   0.0    1.3  1  EDS1_EP          Enhanced disease susceptibility 1 protein EP


Domain annotation for each model (and alignments):
>> Methyltransf_16  Lysine methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.7   0.0   8.8e-21   1.8e-17      17     171 ..     120     258 ..     111     261 .. 0.84

  Alignments for each domain:
  == domain 1  score: 63.7 bits;  conditional E-value: 8.8e-21
  Methyltransf_16  17 igrkvWdaavvlvkylekklakelganelsklsvlELGsGtGlvGlavaellpeakviltDlee.llellkknielnknalkskvkvevLdWge 109
                       g+  W+a+++l++ l ++           +++v+ELG+GtGlv +   ++  +a+v+ tD ++ +++ +k+n  ln+     ++ v+ L Wg 
       EPX72691.1 120 TGARTWEAGMALAELLYHNP-------INPGTRVVELGAGTGLVSILCSKM--GASVLATDGDNnVCQGIKRNAHLNG----CDIPVQRLLWGV 200
                      68899******999998853.......457899******************..********99879999999999966....99********88 PP

  Methyltransf_16 110 eleedllekeevDlilaaDcvYledslelLvkvLkellkkesk...vlvaykkrreaekkFfkll 171
                      +    +      Dl+la+D++Y  d l +L++++++l++ +++   +l a  +r+e+  +F++ll
       EPX72691.1 201 DP--PV----YADLVLASDVTYEGD-LRCLATTMNDLITVNPCckiLLAATLRRQETIDNFLRLL 258
                      65..33....36**********776.89**************99944455566677778888766 PP

>> PrmA  Ribosomal protein L11 methyltransferase (PrmA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   0.0   1.5e-08   2.9e-05     158     214 ..     139     194 ..     127     213 .. 0.82

  Alignments for each domain:
  == domain 1  score: 23.6 bits;  conditional E-value: 1.5e-08
        PrmA 158 lvkegeevlDvGtGSGiLaiaaakLgakkvvavDiDevAvkvakeNaelNkveakle 214
                  +++g++v+ +G+G+G+ +i  +k+ga +v+a+D D+   +  k+Na+lN+++  ++
  EPX72691.1 139 PINPGTRVVELGAGTGLVSILCSKMGA-SVLATDGDNNVCQGIKRNAHLNGCDIPVQ 194
                 478999********************9.69********************9986554 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0         5     1e+04      61      85 ..      20      44 ..       6      50 .. 0.57
   2 !   15.1   0.0   1.4e-05     0.027       1      49 [.     146     192 ..     146     221 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 5
                     STTTEEEEEEESTGGGSSHHHHHHH CS
  Methyltransf_25 61 edgsfDlvvssgalhhlsdedleka 85
                       ++f  v+s +++++l ++ ++++
       EPX72691.1 20 SPNHFQWVTSDNEWSILVEPFAQAY 44
                     4566777777555665554545555 PP

  == domain 2  score: 15.1 bits;  conditional E-value: 1.4e-05
                      EEEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTTTEE CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeeglnve 49 
                      v++lG+GtG +++ ++k +  a+v+++D + + ++ ++++a+ +g+++ 
       EPX72691.1 146 VVELGAGTGLVSILCSKMG--ASVLATDGDNNVCQGIKRNAHLNGCDIP 192
                      89**************995..********************88887654 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   1.1e-05     0.021      30      83 ..     138     192 ..     125     200 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 1.1e-05
                 C...TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEE CS
         MTS  30 e...lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankleve 83 
                 +      +v+ lG+G+G++++ + k+  +  v ++d d +  +  k+n++ n++++ 
  EPX72691.1 138 NpinPGTRVVELGAGTGLVSILCSKMGAS--VLATDGDNNVCQGIKRNAHLNGCDIP 192
                 33337789*****************9887..99*****************9998854 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   2.9e-05     0.057      14      59 ..     132     179 ..     121     262 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 2.9e-05
  Methyltransf_23  14 erll..pklraggrvLdiGcGtGillevlrengfsvtgvDlspeavei 59 
                      ++ll     ++g rv+++G+GtG ++ ++++ g+sv + D + +  + 
       EPX72691.1 132 AELLyhNPINPGTRVVELGAGTGLVSILCSKMGASVLATDGDNNVCQG 179
                      4444322268999***************************98765444 PP

>> Met_10  Met-10+ like-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   3.1e-05     0.062      98     150 ..     140     190 ..     132     201 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 3.1e-05
                 --TT-EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-T CS
      Met_10  98 veegevVvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkve 150
                 +++g +Vv++ AG G  +i ++k   +  vla d + +  + +k+n +lN  +
  EPX72691.1 140 INPGTRVVELGAGTGLVSILCSK--MGASVLATDGDNNVCQGIKRNAHLNGCD 190
                 799********************..77889********************765 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       4.4   8.7e+03      35      55 ..      11      31 ..       4      39 .. 0.66
   2 ?    1.2   0.0      0.31   6.1e+02      17      33 ..      92     108 ..      80     125 .. 0.81
   3 ?    9.5   0.1   0.00084       1.7       1      75 [.     147     214 ..     147     258 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 4.4
  Methyltransf_12 35 dakeklakrennnnnnvelea 55
                      +++ l++ ++n++++v+ ++
       EPX72691.1 11 IKQQYLQQVSPNHFQWVTSDN 31
                     355666777777777776655 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.31
  Methyltransf_12  17 klpdieytgvDispsai 33 
                      ++p+++yt +D+s ++ 
       EPX72691.1  92 EIPPVQYTLCDYSVRVY 108
                      45899********8876 PP

  == domain 3  score: 9.5 bits;  conditional E-value: 0.00084
  Methyltransf_12   1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvelealdlldldggssfDlvvasnv 75 
                      +e+G+GtG ++  + +   +++++++D + +++ +  ++ a+ ++ +  + +l        d++ + Dlv+as+v
       EPX72691.1 147 VELGAGTGLVSILCSKM--GASVLATDGDNNVC-QGIKRNAHLNGCDIPVQRLLWGV----DPPVYADLVLASDV 214
                      69************999..**************.66666666655444444443333....33468888888887 PP

>> PCMT  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   5.6e-05      0.11      27      94 ..      92     163 ..      88     187 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 5.6e-05
                 HS-GGGGSSCGGGGGTTSSS-EEEETTEEE--HHHHHHHH.HHTT...--TT-EEEEES-TTSHHHHHHHHH CS
        PCMT  27 evdReefvpesfkekaYedaplsigynatiSaphmvalal.elle...lkkgarvLevGsGsGyltavlarl 94 
                 e++  ++  + +   +Ye + + +  ++t       ++al ell    +++g+rv+e+G+G+G  + + +++
  EPX72691.1  92 EIPPVQYTLCDYSVRVYESQNVLLREGTTGARTWEAGMALaELLYhnpINPGTRVVELGAGTGLVSILCSKM 163
                 566677888889899999888878888777777766665536666789***************998887776 PP

>> EDS1_EP  Enhanced disease susceptibility 1 protein EP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   8.4e-05      0.17      42     105 ..       7      70 ..       3      72 .. 0.93

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 8.4e-05
     EDS1_EP  42 vveevekkelkeefelrkkwleagtnyrrlvEPLdiAeYyrkgkkgdYvkkgrskrykllekwl 105
                 ++++++++ l++ +  + +w+ + +++  lvEP + A  ++  + + Y+k   +++++ll+k+ 
  EPX72691.1   7 FLQKIKQQYLQQVSPNHFQWVTSDNEWSILVEPFAQAYLCEFLRPSIYTKLLLKSYFRLLDKYN 70 
                 68899999********************************9999999*99999*******9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       407  (0.0227007); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2027.52
//
Query:       EPX72692.1  [L=255]
Description: siepin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-49  167.5   4.5    4.8e-49  167.2   4.5    1.1  1  Seipin    Putative adipose-regulatory protein (Seipin)


Domain annotation for each model (and alignments):
>> Seipin  Putative adipose-regulatory protein (Seipin)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  167.2   4.5   2.7e-53   4.8e-49       3     197 .]      24     229 ..      21     229 .. 0.94

  Alignments for each domain:
  == domain 1  score: 167.2 bits;  conditional E-value: 2.7e-53
      Seipin   3 llvlavilyilfyyayvpevilskpvhlqygklts.PyanvslnsdssllkenqkYdvsveLslPeseaNlelGnFmvelellss.sgkilanssrpal 99 
                 + + ++++yi+fy +++p+ ++++pvh++y+++++ Pya+v++  d+  + ++ + +  ++L++P+s++N+++GnFm+++++  + ++++l ++sr++l
  EPX72692.1  24 FSIPSLVSYIIFYDTVIPHAVVQYPVHFNYTTGSNyPYAKVNM--DHFSIDPRLPGTSILQLTIPRSQRNRDIGNFMISVDFHGRtEQTTLKSVSRTVL 120
                 56789*****************************99*****99..9999************************************9999********** PP

      Seipin 100 Lpyrsplvrllrtllllpllllglneesqtlrvplaesv............venne....npptsarvevqsraapelqiysAklrfeakltglrylmy 182
                 +py s + + l+ +l++p++l+g+  e +t++v+l+es             ++  +     +p+sa++ + s   +++++y+A+l f +kl+g+r++my
  EPX72692.1 121 FPYYSTIQEYLKLILCFPFYLTGILDERETVSVKLLESEmfgnhrsaintlSS--RfyvaDTPKSATIRIYS---KDIEFYEATLAFASKLHGMRWFMY 214
                 **************************************999988887776522..13466999999999999...9*********************** PP

      Seipin 183 shpilsfvvftllfw 197
                 +h++++f+vft+lfw
  EPX72692.1 215 THRVTAFFVFTTLFW 229
                 **************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       733  (0.0408835); expected 358.6 (0.02)
Passed bias filter:                      348  (0.0194099); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.28s 00:00:00.78 Elapsed: 00:00:00.49
# Mc/sec: 1577.56
//
Query:       EPX72693.1  [L=598]
Description: meiotic spindle pole body protein Kms1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     0.0096   15.3  26.6      0.033   13.5  19.9    2.9  3  GAS             Growth-arrest specific micro-tubule binding
  ------ inclusion threshold ------
      0.013   15.9   8.0      0.013   15.9   8.0    2.7  3  Fez1            Fez1
      0.047   13.7  27.4      0.029   14.4  11.8    3.2  3  CENP-F_leu_zip  Leucine-rich repeats of kinetochore protein C
       0.32   11.7  29.6        2.1    9.1   5.5    4.7  5  YabA            Initiation control protein YabA
       0.76   10.0  12.2       0.81   10.0   0.3    3.3  3  HALZ            Homeobox associated leucine zipper
        1.8    8.9  14.4        8.7    6.7   6.8    2.9  2  YlqD            YlqD protein
        2.1    8.5  14.6        3.3    7.8   0.4    4.0  3  TolA_bind_tri   TolA binding protein trimerisation
        2.9    8.1  18.2       0.85    9.7   0.3    4.3  3  Swi5            Swi5
        3.1    8.3   8.3        0.7   10.4   2.5    3.1  2  NPV_P10         Nucleopolyhedrovirus P10 protein
        9.6    6.7  17.7         11    6.5   0.5    4.5  4  Cep57_MT_bd     Centrosome microtubule-binding domain of Cep5


Domain annotation for each model (and alignments):
>> GAS  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.5     0.014        25      75     126 ..     177     228 ..     170     240 .. 0.84
   2 !   13.5  19.9   1.9e-05     0.033      24     137 ..     249     361 ..     241     364 .. 0.95
   3 ?   -1.5   0.0      0.75   1.3e+03      71     120 ..     394     443 ..     382     447 .. 0.57

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.014
         GAS  75 kqlknyekdkqslknlkarlkelekelkdlkwehevleqrfekvekerdely 126
                 +q   y+ + +s+k+l++rl+el++ l + + ++++++  ++ +  ++del+
  EPX72693.1 177 NQFSSYNIENNSIKSLNMRLRELQDSLDQARDQARNKSRIVDLLNGKIDELT 228
                 6778899999999999999999999999999999999888888888888775 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 1.9e-05
         GAS  24 NLelIkslKeeieelkkkeernekelseisqenkrlkepLkkaeeeveeLrkqlknyekdkqslknlkarlkelekelkdlkwehevleqrfekveker 122
                 NL+ I++lK++ e l +++e  + el + s+e  + k++L  +e++++   ++l++ ++ +++l ++ ++    e+ l++lk+e++ l+ + +++e+e 
  EPX72693.1 249 NLQ-IRKLKSKNESLGAENENFQSELIAKSNEIVQGKKQLSILENKCAAIMEELEKKSSSFNDLYKAASKSLLNEEVLSNLKLENHKLRTHSQQLEDEL 346
                 554.899******************************************************************************************** PP

         GAS 123 delykkfeaaiqevq 137
                 +e++k+ ++ ++e+ 
  EPX72693.1 347 EEFRKEKQNHVEEIN 361
                 ********9999985 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 0.75
         GAS  71 eeLrkqlknyekdkqslknlkarlkelekelkdlkwehevleqrfekvek 120
                 ee ++   + +++ ++ + + + l +le+ l++ ++ ++ l   f+ +++
  EPX72693.1 394 EEINRSTSTINSQANQKDDIGTDLLDLENALSQERLRNKELTSGFTILSE 443
                 45555555555555555555555666666666666666666655555555 PP

>> Fez1  Fez1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1       3.6   6.5e+03     107     107 ..      82      82 ..      45     151 .. 0.51
   2 ?    4.6   3.8     0.022        39      51     125 ..     186     260 ..     170     269 .. 0.76
   3 ?   15.9   8.0   7.4e-06     0.013      22     158 ..     269     438 ..     267     444 .. 0.75

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 3.6
        Fez1 107 s 107
                 s
  EPX72693.1  82 S 82 
                 1 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.022
        Fez1  51 eeeikeleesleektlelevcenelqrkkseaellrekvekleeelkelreelselsleeeeaalesdeakaqrq 125
                 +++ik+l+ +l+e +++l++  ++ ++k+  ++ll+ k+++l + l +l  + +e++l++e ++l+ ++ k +++
  EPX72693.1 186 NNSIKSLNMRLRELQDSLDQARDQARNKSRIVDLLNGKIDELTHYLGSLEAQHREMNLTQEAQNLQIRKLKSKNE 260
                 567788888888888888888888888888888888888888888888888888888777777777777666554 PP

  == domain 3  score: 15.9 bits;  conditional E-value: 7.4e-06
        Fez1  22 sqaevtqklseivalkaqlrelrak....leekeeeikeleesleektlelevcenelqrkkseaellrekvekleeelkelreelselsleeeeaa.. 114
                  q+e+ +k +eiv+ k ql  l++k    +ee e++ +++++ ++  +++l   e+ l++ k e++ lr + ++le+el+e+r+e +++ +e +  +  
  EPX72693.1 269 FQSELIAKSNEIVQGKKQLSILENKcaaiMEELEKKSSSFNDLYKAASKSLL-NEEVLSNLKLENHKLRTHSQQLEDELEEFRKEKQNHVEEINL-Rhp 365
                 799**************99755544223388999999999999888888764.46668888999********************88875544333.258 PP

        Fez1 115 ...............................lesdeakaqrqeaeeleelkreverlraeLkeerqkkeeqassF 158
                                                +  +++ + +++a++ ++   ++  l+++L++er +++e +s F
  EPX72693.1 366 splpsqkltnstfspflsipfspahiiseeiN--RSTSTINSQANQKDDIGTDLLDLENALSQERLRNKELTSGF 438
                 89999999999999999999988777665431..11122233355666777778888899999999888888877 PP

>> CENP-F_leu_zip  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4  11.8   1.6e-05     0.029       7     110 ..     205     312 ..     199     322 .. 0.85
   2 ?    3.2  10.2     0.045        81      22      88 ..     290     359 ..     290     412 .. 0.78
   3 ?   -1.6   0.1       1.4   2.4e+03      52      86 ..     401     435 ..     387     439 .. 0.72

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 1.6e-05
  CENP-F_leu_zip   7 hvlekLKeserkadsLkdkvenLerelemseenqekvileaEtskaevetlkeeieelaeelreleldLvalrsekeeLekelqkkqer....vs 97 
                     +++++ ++  r  d+L++k+++L   l  +e++  ++ l  E +  ++ +lk++ e l +e ++++++L a ++e  + +k+l    ++    ++
      EPX72693.1 205 QARDQARNKSRIVDLLNGKIDELTHYLGSLEAQHREMNLTQEAQNLQIRKLKSKNESLGAENENFQSELIAKSNEIVQGKKQLSILENKcaaiME 299
                     5667778888999**********************************************************998887777776533333222379 PP

  CENP-F_leu_zip  98 eLeslnsslenll 110
                     eLe+  ss++ l 
      EPX72693.1 300 ELEKKSSSFNDLY 312
                     9******998875 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.045
  CENP-F_leu_zip  22 LkdkvenLerelemseenqekvileaEtsk...aevetlkeeieelaeelreleldLvalrsekeeLeke 88 
                     L++k  ++  ele   ++ +++   a +s    + +++lk e ++l+++ ++le +L+++r+ek++  +e
      EPX72693.1 290 LENKCAAIMEELEKKSSSFNDLYKAASKSLlneEVLSNLKLENHKLRTHSQQLEDELEEFRKEKQNHVEE 359
                     56777777777777777777777777776422256788**************************986555 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 1.4
  CENP-F_leu_zip  52 aevetlkeeieelaeelreleldLvalrsekeeLe 86 
                      ++++  ++++ + + l +le  L++ r  ++eL+
      EPX72693.1 401 STINSQANQKDDIGTDLLDLENALSQERLRNKELT 435
                     55566667788888888888888888877777776 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.1     0.004       7.2      29      61 ..      52      84 ..      44     105 .. 0.73
   2 ?    2.3   0.1      0.14   2.6e+02      27      64 ..     175     212 ..     167     221 .. 0.70
   3 ?    9.1   5.5    0.0011       2.1       5      67 ..     226     288 ..     223     300 .. 0.82
   4 ?    3.6   7.4     0.057     1e+02      10      67 ..     294     354 ..     288     364 .. 0.57
   5 ?   -3.4   0.0       8.8   1.6e+04      23      40 ..     416     433 ..     397     447 .. 0.54

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.004
                HHHHHHHHHHHHHHHHHHHHHHHH......XXXXXXXXX CS
        YabA 29 eelaelleenaeLeleneklrerl......eeeekkeke 61
                ++++e +++n +L++++++lre+l      +      k+
  EPX72693.1 52 RATSEFVQKNPTLSINKDNLRELLiklvqfS------KS 84
                567899*****************96554331......22 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.14
                 HHHHHHHHHHHHHHHHHHHHHHHHHHXXXXXXXXXXXX CS
        YabA  27 lkeelaelleenaeLeleneklrerleeeekkekekkk 64 
                 + +++++   en++++  n +lre++++ ++++++ ++
  EPX72693.1 175 VANQFSSYNIENNSIKSLNMRLRELQDSLDQARDQARN 212
                 55677777889999999999999998544444444333 PP

  == domain 3  score: 9.1 bits;  conditional E-value: 0.0011
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHXXXXXXXXXXXXXXX CS
        YabA   5 elfdkleeleeqleelleeleelkeelaelleenaeLeleneklrerleeeekkekekkkels 67 
                 el++ l +le q +e++ + e+ + ++ +l  +n++L +ene+++++l  ++++  + kk+ls
  EPX72693.1 226 ELTHYLGSLEAQHREMNLTQEAQNLQIRKLKSKNESLGAENENFQSELIAKSNEIVQGKKQLS 288
                 7899999**********99999999**********************9666665555555554 PP

  == domain 4  score: 3.6 bits;  conditional E-value: 0.057
                 HHHHHHHHHHHHHHHHHHHHH.HHHHHHHH..HHHHHHHHHHHHHHXXXXXXXXXXXXXXX CS
        YabA  10 leeleeqleelleeleelkee.laelleen..aeLeleneklrerleeeekkekekkkels 67 
                  +++ e+le+ ++++++l ++  ++ll+e+  ++L+len+klr++ ++ e++ +e +ke++
  EPX72693.1 294 CAAIMEELEKKSSSFNDLYKAaSKSLLNEEvlSNLKLENHKLRTHSQQLEDELEEFRKEKQ 354
                 5566777777777777775440455555553357899999999888444333333222222 PP

  == domain 5  score: -3.4 bits;  conditional E-value: 8.8
                 HHHHHHHHHHHHHHHHHH CS
        YabA  23 eleelkeelaelleenae 40 
                 +l +l+++l++   +n+e
  EPX72693.1 416 DLLDLENALSQERLRNKE 433
                 333333333333333333 PP

>> HALZ  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       3.4   6.2e+03      23      32 ..     242     251 ..     225     253 .. 0.64
   2 ?   10.0   0.3   0.00045      0.81      16      35 ..     254     273 ..     251     275 .. 0.93
   3 ?    3.6   4.6     0.045        81      16      41 ..     327     352 ..     326     354 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 3.4
        HALZ  23 sLkkenekLk 32 
                 +L +e ++L+
  EPX72693.1 242 NLTQEAQNLQ 251
                 4667777776 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00045
        HALZ  16 aLksdydsLkkenekLkael 35 
                 +Lks+++sL +ene+ ++el
  EPX72693.1 254 KLKSKNESLGAENENFQSEL 273
                 7*****************98 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.045
        HALZ  16 aLksdydsLkkenekLkaelqeLkek 41 
                 +Lk+++  L+ + ++L+ el+e ++ 
  EPX72693.1 327 NLKLENHKLRTHSQQLEDELEEFRKE 352
                 79999999999999999999998765 PP

>> YlqD  YlqD protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   6.8    0.0048       8.7      17      92 ..     212     293 ..     209     305 .. 0.90
   2 ?    6.1   0.4    0.0078        14      23      57 ..     333     388 ..     319     440 .. 0.67

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0048
        YlqD  17 lKeelqqqlqaqieqldkelqqLefqakrlikeikkqsaq......qieeiqeqvekekserlekkkqllqqleqvqkLelg 92 
                  K ++ + l+ +i++l + l  Le q +++   ++ q+ q      ++e++ ++ e+ +se+ +k +++ q  +q++ Le  
  EPX72693.1 212 NKSRIVDLLNGKIDELTHYLGSLEAQHREMNLTQEAQNLQirklksKNESLGAENENFQSELIAKSNEIVQGKKQLSILENK 293
                 68999999**************************9999999999999999999999999******************99976 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0078
        YlqD  23 qqlqaqieqldkelqqLefqakrlikeikkqsaq.....................q 57 
                 ++l+++ +ql+ el++++ +++ +++ei+  +++                      
  EPX72693.1 333 HKLRTHSQQLEDELEEFRKEKQNHVEEINLRHPSplpsqkltnstfspflsipfsP 388
                 46788889999999999999999999988766667776666666666666666653 PP

>> TolA_bind_tri  TolA binding protein trimerisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   6.0     0.068   1.2e+02      17      59 ..     200     242 ..     184     259 .. 0.72
   2 ?    3.6   1.6     0.039        70      39      59 ..     222     242 ..     220     275 .. 0.51
   3 ?    7.8   0.4    0.0019       3.3      27      63 ..     325     361 ..     297     370 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.068
  TolA_bind_tri  17 sqlllelqqqlealqqelreLRGqiEelqyqleqleerQrdlY 59 
                    + +l +   q  + ++ ++ L+G+i+el++ l +le + r++ 
     EPX72693.1 200 QDSLDQARDQARNKSRIVDLLNGKIDELTHYLGSLEAQHREMN 242
                    44444555566666666899********************985 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.039
  TolA_bind_tri  39 GqiEelqyqleqleerQrdlY 59 
                    G+i+el++ l +le + r++ 
     EPX72693.1 222 GKIDELTHYLGSLEAQHREMN 242
                    555555555555555555442 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.0019
  TolA_bind_tri  27 lealqqelreLRGqiEelqyqleqleerQrdlYldlD 63 
                    l++l+ e  +LR + ++l+ +le+ ++  ++  ++++
     EPX72693.1 325 LSNLKLENHKLRTHSQQLEDELEEFRKEKQNHVEEIN 361
                    889**********************999988887776 PP

>> Swi5  Swi5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.3   0.00048      0.85       3      46 ..     187     230 ..     185     230 .. 0.95
   2 ?    1.7   3.2      0.16   2.9e+02       4      37 ..     251     282 ..     248     330 .. 0.88
   3 ?    3.3   2.3     0.047        85       4      37 ..     331     362 ..     322     368 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00048
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHH CS
        Swi5   3 aeikeleeqleelekelaelkeelkekkdpeetvkrhIklLheY 46 
                 ++ik+l+ +l+el+++l++++++ ++k    + ++ +I+ L  Y
  EPX72693.1 187 NSIKSLNMRLRELQDSLDQARDQARNKSRIVDLLNGKIDELTHY 230
                 789**************************************998 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.16
                 HHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHH CS
        Swi5   4 eikeleeqleelekelaelkeelkekkdpeetvk 37 
                 +i++l+++ e+l +e +++++el +  +++e+v+
  EPX72693.1 251 QIRKLKSKNESLGAENENFQSELIA--KSNEIVQ 282
                 7899999999999999999999985..4777776 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.047
                 HHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHH CS
        Swi5   4 eikeleeqleelekelaelkeelkekkdpeetvk 37 
                 e+++l+ + ++le+el+e+++e +++   ee+  
  EPX72693.1 331 ENHKLRTHSQQLEDELEEFRKEKQNH--VEEINL 362
                 56788888899999999998886643..565555 PP

>> NPV_P10  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   2.5   0.00039       0.7      12      57 ..     188     237 ..     184     361 .. 0.91
   2 ?   -2.7   0.4       4.7   8.5e+03      42      66 ..     401     425 ..     393     429 .. 0.57

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00039
     NPV_P10  12 dikavddkVdalqqqvddvqenlpd....vtelnekLdaqsaqLaeletk 57 
                  ik ++ ++  lq+++d+ +++ ++    v+ ln k+d+++  L +le++
  EPX72693.1 188 SIKSLNMRLRELQDSLDQARDQARNksriVDLLNGKIDELTHYLGSLEAQ 237
                 69999999999999997777666653333777899999999999999874 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 4.7
     NPV_P10  42 ekLdaqsaqLaeletkvenIqdiLn 66 
                 + +++q++q +++ t + + ++ L+
  EPX72693.1 401 STINSQANQKDDIGTDLLDLENALS 425
                 4556666666666666666555555 PP

>> Cep57_MT_bd  Centrosome microtubule-binding domain of Cep57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   3.8      0.75   1.3e+03      31      47 ..     196     212 ..     185     256 .. 0.50
   2 ?    0.4   2.8      0.51   9.1e+02      17      70 ..     220     279 ..     207     285 .. 0.54
   3 ?    6.5   0.5    0.0063        11      46      76 ..     283     313 ..     260     314 .. 0.83
   4 ?    6.0   0.6    0.0094        17      18      43 ..     340     365 ..     323     372 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.75
  Cep57_MT_bd  31 lqelaaqynaldpslgk 47 
                  l el++ + +  + + +
   EPX72693.1 196 LRELQDSLDQARDQARN 212
                  33333333333333322 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.51
  Cep57_MT_bd  17 lkeLedEfehlklelqelaaqynaldpsl......gkrkRkdLaeeleelvkrlEaKadq 70 
                  l++  dE++h+   l+   +++n ++ +        k+k ++L +e e+ +++l aK++ 
   EPX72693.1 220 LNGKIDELTHYLGSLEAQHREMNLTQEAQnlqirkLKSKNESLGAENENFQSELIAKSNE 279
                  555556666666555555555555555541111112244555555555555555555555 PP

  == domain 3  score: 6.5 bits;  conditional E-value: 0.0063
  Cep57_MT_bd  46 gkrkRkdLaeeleelvkrlEaKadqIykLyd 76 
                  gk++  +L++++ +++++lE+K+ +   Ly+
   EPX72693.1 283 GKKQLSILENKCAAIMEELEKKSSSFNDLYK 313
                  7778889*****************9999998 PP

  == domain 4  score: 6.0 bits;  conditional E-value: 0.0094
  Cep57_MT_bd  18 keLedEfehlklelqelaaqynaldp 43 
                  ++LedE+e+ ++e q   +++n   p
   EPX72693.1 340 QQLEDELEEFRKEKQNHVEEINLRHP 365
                  79**************9999996655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (598 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1680  (0.0937029); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                        24  (0.00133861); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.78u 0.29s 00:00:01.07 Elapsed: 00:00:00.52
# Mc/sec: 3435.51
//
Query:       EPX72694.1  [L=71]
Description: hypothetical protein SOCG_05661 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       566  (0.031569); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.27s 00:00:00.67 Elapsed: 00:00:00.44
# Mc/sec: 484.79
//
Query:       EPX72695.1  [L=671]
Description: sorting nexin Mvp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.7e-18   65.2   2.2    4.7e-18   65.2   2.2    2.9  3  PX        PX domain
  ------ inclusion threshold ------
      0.029   14.1   0.0      0.054   13.2   0.0    1.3  1  SopA_C    SopA-like catalytic domain
       0.11   12.9   1.0       0.26   11.7   1.0    1.6  1  EspF      EspF protein repeat


Domain annotation for each model (and alignments):
>> PX  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.23   1.4e+03      24      52 ..      27      55 ..      22      78 .. 0.67
   2 !   65.2   2.2   7.9e-22   4.7e-18      19     111 ..     308     398 ..     297     400 .. 0.88
   3 ?   -2.2   0.0      0.65   3.9e+03      73      95 ..     616     637 ..     589     645 .. 0.65

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.23
                EEEEETTSSSEEEEEEEHHHHHHHHHHHH CS
          PX 24 yevelktgakewtvkRrYsdFeeLhskLl 52
                ye  l+++++ ++ k   ++F++L + L 
  EPX72695.1 27 YEAALGNSSIPSQYKQYWEEFQKLDQFLD 55
                66666666677777777788888877654 PP

  == domain 2  score: 65.2 bits;  conditional E-value: 7.9e-22
                 EEEEEEEEEETTSSSEEEEEEEHHHHHHHHHHHHHHHTTSTSTSSSTSGSSSSS..CTTSHHHHHHHHHHHHHHHHHHHTSCHHHHSHHHHHHHH CS
          PX  19 hsyylyevelktgakewtvkRrYsdFeeLhskLlrkfprvkiPplPkkvlfgsv..rkkdeefiekrrkgLeeyLqrllnhpelrnsevlteFLe 111
                 h+ y+++ +++    +++v RrYsdF++Lhs+L +k+p +++P lP+k+ +  +   ++ + f+e rr+gL ++++ ++ hp ++++ev++ F++
  EPX72695.1 308 HNNYIISDSRN----TREVLRRYSDFYWLHSYLVEKYPWRRVPLLPSKKFHFAKrtASSRNTFLEYRRQGLYDFVNDVAYHPIFSQDEVIQVFFK 398
                 44455555555....57********************************886558889999********************************97 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 0.65
                 CTTSHHHHHHHHHHHHHHHHHHH CS
          PX  73 rkkdeefiekrrkgLeeyLqrll 95 
                 r + ++ +++  ++L++yL  +l
  EPX72695.1 616 RFQIDQYLNEEIEYLQNYLS-IL 637
                 45556667777888888886.44 PP

>> SopA_C  SopA-like catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0     9e-06     0.054      14      57 ..     456     497 ..     448     507 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 9e-06
                 -S--TTSCHH...........HHHHHHHHGGGSCCSHHHHHHHH CS
      SopA_C  14 stvklvddekqllmhglwanrvsrldsifdplldeGfyarllsl 57 
                   +k+ +++    m  l  + v rl+  f++lld G y+r+++ 
  EPX72695.1 456 NIIKIFEKAI-YTMDHL-HDDVNRLQNSFNCLLDSGIYQRVFNS 497
                 4566665555.445444.578*******************9875 PP

>> EspF  EspF protein repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   1.0   4.3e-05      0.26      10      31 ..     169     191 ..     163     197 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 4.3e-05
        EspF  10 hiPPaPnWPa.PsPPvqneqsrP 31 
                   PP Pn+P  PsPP +ne s  
  EPX72695.1 169 NSPPFPNFPTtPSPPGRNEASYN 191
                 57*******55********9965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (671 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       950  (0.0529868); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.64u 0.26s 00:00:00.90 Elapsed: 00:00:00.45
# Mc/sec: 4439.03
//
Query:       EPX72696.1  [L=566]
Description: NADH dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.5e-50  170.9   0.0    4.3e-50  170.6   0.0    1.1  1  Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
    3.4e-10   40.3   0.0    2.4e-09   37.6   0.0    2.4  2  Pyr_redox    Pyridine nucleotide-disulphide oxidoreductase
  ------ inclusion threshold ------
      0.015   14.6   0.2       0.13   11.5   0.2    2.1  1  Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
       0.05   13.2   0.0      0.086   12.4   0.0    1.4  1  DAO          FAD dependent oxidoreductase


Domain annotation for each model (and alignments):
>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  170.6   0.0   9.6e-54   4.3e-50       2     294 .]     108     440 ..     107     440 .. 0.91

  Alignments for each domain:
  == domain 1  score: 170.6 bits;  conditional E-value: 9.6e-54
                  SEEEE--SHHHHHHHHHHHHHTS-EEEEETTHCHHHCSHHHHCHHHHHHHHHHHHH..HHHHCHHHH.CCCCHCCTCEEEEESCEEEEETEEEC...T CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxx...x RF
  Pyr_redox_2   2 dvvviGgGpAGlaaaltlaqagakvtlvelegtclnggcllskallgvaedaeias..evvkklnqg.ielllgeevvkidpgkkkvklekkke...g 93 
                   +v++G+G+++++  +t+  + ++v++v + ++ ++++ ll+++++g+ + ++i++  + + + +++ ++++ + e++++d++ k+v+++ +++   +
   EPX72696.1 108 TLVILGAGWGATSILRTIDSSLYNVVVV-SPRNYFLFTSLLPSTATGSVHSRSIVQpiRYLLRHKSHfVKFYEA-ECTDVDKDGKTVEIRRQTSdgqE 203
                  58**************************.8888999999999****************5555557785777776.**************888777775 PP

                  CEEEEEESEEEE---EEE-BCTCTTC.TTBEECCSECHHHHHHCCSS-T..................SEEEEES-SHHHHHHHHHHHHHT-....... CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..................xxxxxxxxxxxxxxxxxxxxxxxx....... RF
  Pyr_redox_2  94 deekiaydklvlAtGssprdlgipGvaenvgklvrtldsaealklkllp..................krivvvGgGyiGvElAaalaklgk....... 166
                    eki yd+lv   G+++ ++gipG +e++++l +++ + ++++   ++                   ++vvvGgG++G+E+A+++a++ k       
   EPX72696.1 204 LVEKINYDYLVCSVGAETQTFGIPGIEEHGCFL-KEMWDSQKIRTRIMKcleqaqfkdldpetrrryVHFVVVGGGPTGMEFAGEMADFIKddlkswf 300
                  5689**************************999.8999999999999999*************9999999*******************888****** PP

                  .......EEEEEESSSSSSTTS-HHHHHHHHHHHHHTTEEEEESCEEEEEEETTEEEEEEETTSCE....EEESEEEE-S-EEES-HHCS..HCCT-E CS
                  .......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxx..xxxxxx RF
  Pyr_redox_2 167 .......evtlveardrllraldkelsaaleealekeGvevklgtsvkeidgngeklevvledgee....idadlvvvavGvrpstelle..eklgle 251
                          vtl+ea++ +l+++ ++l+++ +  + + +++++++t  ke+++++  +ev++ +g++    i+  l+v+a G rp++ + +   +l  +
   EPX72696.1 301 pelandfSVTLIEALPSVLPMFSSKLREYTKSLFARTNINIRTNTALKEVTADSIIVEVKDPEGNKveesIPFGLLVWAGGNRPRPLINKiiHSLEEQ 398
                  *****999**********************************************9778999999999999***************9887795555555 PP

                  EEETTEEE--TTSBES.STTEEE-GGGCTECCSS--HHHHHHHH CS
                  xxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 252 lderggivvdeflrtn.vpgiyaiGDvaggkggpelaqaAvqqG 294
                   ++r+g+ vd++++++ +++++a+GD++  +    +aq+A+qqG
   EPX72696.1 399 -TNRRGLIVDDYMQVKgMQDVFALGDCT-STAYAPTAQVASQQG 440
                  .5888888*******99***********.889999*******98 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       1.1   4.9e+03       2      35 ..     109     142 ..     108     159 .. 0.69
   2 !   37.6   0.0   5.4e-13   2.4e-09       1      70 [.     271     354 ..     271     361 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.1
                 EEEECSSHHHHHHHHHHHHTTSEEEEEESSSSSS CS
   Pyr_redox   2 vvvvGgGyiglElAgalaelgkkVtvversdkll 35 
                 +v++G+G+ +     ++     +V vv  ++ +l
  EPX72696.1 109 LVILGAGWGATSILRTIDSSLYNVVVVSPRNYFL 142
                 6899999877766666666666777777777776 PP

  == domain 2  score: 37.6 bits;  conditional E-value: 5.4e-13
                 EEEEECSSHHHHHHHHHH............HHTT....SEEEEEESSSSSSTTSSHHHHHHHHHHHHHTTEEEECSEEEEEEEEET CS
   Pyr_redox   1 kvvvvGgGyiglElAgal............aelg....kkVtvversdkllrllDeeaskilqeklekngievllntkveeiegse 70 
                 + vvvGgG +g+E+Ag++                     +Vt++e+ + +l+++  +++++++  + + +i++++nt ++e++ ++
  EPX72696.1 271 HFVVVGGGPTGMEFAGEMadfikddlkswfP--ElandFSVTLIEALPSVLPMFSSKLREYTKSLFARTNINIRTNTALKEVTADS 354
                 679***************5555555444443..0444459******************************************9765 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.2   2.8e-05      0.13     166     261 ..     271     373 ..     256     420 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 2.8e-05
  Pyr_redox_3 166 kvvViGgknSavDaAlelvrk.gaeVtvvtrgseiekeesdpsy..slkpdienrleelvke....ekikvlfnaevkeikekeeeykvktedgkkve 256
                  ++vV+Gg+ ++++ A e+++    + +   ++   + + + +++  s+ p+  ++l+e+ k+    ++i++ +n+ +ke++ ++  ++vk ++g+kve
   EPX72696.1 271 HFVVVGGGPTGMEFAGEMADFiKDDLKSWFPELANDFSVTLIEAlpSVLPMFSSKLREYTKSlfarTNINIRTNTALKEVTADSIIVEVKDPEGNKVE 368
                  68999999999999999998755566666666555555544333338999999999999999999878****************************99 PP

  Pyr_redox_3 257 vkddv 261
                  ++  +
   EPX72696.1 369 ESIPF 373
                  85443 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   1.9e-05     0.086     140     301 ..     152     305 ..     137     360 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.9e-05
                 EEEEEHHHHHHHHHHHHHHTT..-EEEESECEEEEEEEETCEEEEE..EECT.EEE.E...EEEEEEE--GGGHHHHHTTCTTTSEEEEEEEEEEEEEE CS
         DAO 140 tgqvdpakltaalaraaealG..veilegtevtgleeedgkvwgve..rttp.gen.d...aadavVnaaGawsdllgllkeldlpispvrgqvlvlkp 229
                 tg v+ +  ++ ++  ++ +   v+++e  e t++++ dgk  +ve  r+t+ g++ +    +d++V + Ga ++ +         i ++  + + lk+
  EPX72696.1 152 TGSVHSRSIVQPIRYLLRHKShfVKFYEA-ECTDVDK-DGK--TVEirRQTSdGQElVekiNYDYLVCSVGAETQTF--------GIPGIEEHGCFLKE 238
                 46666666666655554333223999998.*****55.545..6666666666887646665577********9744........34588889999988 PP

                 CCTHSTGSGCSEEEEE.EEETTTTEEEEEETTSEEEEEESSEEETTCSSTSCSHHHHHHHHHHHHHHSGGGCG CS
         DAO 230 lseklvspaailpvpe.tdddgrgvyvtprkdgrvlvGgtadeesgdddpevdeedidellealrklfPqlgd 301
                   +++  +  i+ ++e     + +++ ++r  + v+vGg       ++  e+  e +d + + l+ +fP+l++
  EPX72696.1 239 MWDSQKIRTRIMKCLEqAQFKDLDPETRRRYVHFVVVGGG------PTGMEFAGEMADFIKDDLKSWFPELAN 305
                 888776777777777799999999*****99999999995......444588888889999999999998633 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (566 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       534  (0.0297841); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.66u 0.27s 00:00:00.93 Elapsed: 00:00:00.46
# Mc/sec: 3696.30
//
Query:       EPX72697.1  [L=731]
Description: Cullin 4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   2.1e-130  436.3  10.0   2.1e-130  436.3  10.0    1.4  2  Cullin        Cullin family
    1.2e-22   79.7   1.1    4.6e-22   77.8   1.1    2.1  1  Cullin_Nedd8  Cullin protein neddylation domain
  ------ inclusion threshold ------
      0.063   13.6   0.1        8.5    6.8   0.1    2.8  2  COX17         Cytochrome C oxidase copper chaperone (COX17)


Domain annotation for each model (and alignments):
>> Cullin  Cullin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  436.3  10.0  3.5e-134  2.1e-130       3     618 .]      32     633 ..      30     633 .. 0.94
   2 ?   -3.4   0.3      0.45   2.7e+03       4      35 ..     669     699 ..     652     723 .. 0.59

  Alignments for each domain:
  == domain 1  score: 436.3 bits;  conditional E-value: 3.5e-134
      Cullin   3 kleeaiqeilkknvsklsfeelYravynlvlskekkqgekLydklkelieehlkellkell....keesdeelLkalkkeWedhktsmkmirdifmyld 97 
                 +l+ a+q i++    k+ ++elY++v+nl      +q+ + ++ l++++++ ++ l++ +l    ++ ++ +  + + ++W+++ + +++++++f y+d
  EPX72697.1  32 QLDIALQVIMAGLGLKTGYQELYSGVENLAK---ANQAYRCFTLLQNHFTSGIHLLRDACLtsisQNMDQVNACSIVVRQWKQWMERVETVQNVFYYMD 127
                 667777888877777899*************...778*******************99998877555555569************************** PP

      Cullin  98 rvyvk...klpsvydlglelfrdhvf.riklkdrlieallkliekeRegevidrsllksviemlvelgedsedkkvYeeeFekafleateefYraeaee 192
                 +++ +   + p++++ +l+lfr++++  ++++  + + llkl e   +g +id+++l++++++l+ +       k+Y   F + +l    +f+++++ee
  EPX72697.1 128 KTFLAkspEFPTIEEYALSLFREELLdTKTIQVPFLNDLLKLFEGIHSGLQIDHACLQEAMSILHRV-------KYYGAVFMPMYLVFLDQFFQRQSEE 219
                 ***54467999***************558999*****************99**************99.......8************************ PP

      Cullin 193 llaensvaseYlkkaeerleeEeervekyldsstkkkllevleeelikkhleelleeelkklledekledLkrlykllsrvdgleeLrkaleeyikeeg 291
                  +++  +++eYl +++++le E   ++++  ++ +k++l++l++ li+++l  l++  ++k ++d++l++ krly+ll+ + + ++L + +++++++ g
  EPX72697.1 220 RINTV-SVNEYLLYTQQCLEYEMLVMNEFDLNRHQKEILQTLQNRLIRSRLPVLVNG-IQKFVNDRDLDSCKRLYSLLHLTMETSQLVEPWSNCLTDIG 316
                 ***86.888*******************98899999********************9.*****988***************999*************** PP

      Cullin 292 kaivkdakekektedakkyveklLelkdkfdklvkeafnndkefekaldeafeefvnknkv..nsksaellakYiDelLkkglkglseeeleekldkvl 388
                  ++v+d      +++++ +v ++++l+  +++++++ f+nd+ ++ ++++++e+f+n      ++ +a+ +akYiD+lL++g++  + + l++ ++  l
  EPX72697.1 317 FELVND------EQNEEMLVPNMISLHTFLQSVIEQGFSNDEALSYSMRKSWETFINGAPGkrKETPAKAIAKYIDYLLRHGEQVTNGTPLQQIFETLL 409
                 ****98......7899*****************************************6655666679***************99999************ PP

      Cullin 389 vlfryiedKDvFekyYkkhLakRLllgksasddaEksmiskLkeecGseftskLegMfkDiklskdlnkefkeyleeekkkkkkvdlsvkVLtagaWpt 487
                  +fry+  KDvFe++Yk++ akRLll+ksas+++E+++++ Lk++cGs+ft+ LegMfkDi+lsk+ +++f+++     +k+ + dl v+VL++++Wp 
  EPX72697.1 410 DIFRYVASKDVFEAFYKRDIAKRLLLNKSASSQNERMLLEMLKKTCGSQFTHALEGMFKDINLSKEFSSSFQQSKL---SKNLHRDLYVNVLSQAYWPA 505
                 ***********************************************************************99764...444568************** PP

      Cullin 488 erskesevsvklpeeledlieeFeefYkskhsgrkLtWlhslgsaelkatfpkkkyelqvstfqmvvLllFnd..eeeklsyeeiqeatglpekeLkrt 584
                 +++ +    v+lpe++++ +++Fe+fY+ k++ +++ Wl+slg++ +ka+fp +++el++s+fq++vLl Fn+    e l+y+++q+ t+l +++L+rt
  EPX72697.1 506 YPEGH----VRLPEDMQEDLQQFEKFYLAKQTSKRIRWLPSLGHCLVKARFPLGNKELSISLFQACVLLEFNKcaPGEGLTYRDLQKTTELTDADLTRT 600
                 99977....********************************************999****************989779********************* PP

      Cullin 585 LqsLavakkarvLlkepkskdveptdefsvNaeF 618
                 LqsL++ +  r L++ pk k  +p+++f+vN++F
  EPX72697.1 601 LQSLSCVR-VRPLVMVPKGKVPKPDTMFYVNEKF 633
                 ********.9*******779************99 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 0.45
      Cullin   4 leeaiqeilkknvsklsfeelYravynlvlsk 35 
                 l++a+  i+ k++++ s  el +++ +++ ++
  EPX72697.1 669 LQAAVVRIM-KQNERVSHDELVQKTIEVCKNR 699
                 556666666.5666666666666666666633 PP

>> Cullin_Nedd8  Cullin protein neddylation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.8   1.1   7.7e-26   4.6e-22       1      62 [.     664     725 ..     664     726 .. 0.98

  Alignments for each domain:
  == domain 1  score: 77.8 bits;  conditional E-value: 7.7e-26
  Cullin_Nedd8   1 dRklaiqaaIVRiMKsrktlshneLvsevieqlskrftpsiadikkrIesLiekeYleRden 62 
                   dR++++qaa+VRiMK++ ++sh+eLv+++ie +++r  p+i+dik++Ie+L++keYleR+++
    EPX72697.1 664 DRQFELQAAVVRIMKQNERVSHDELVQKTIEVCKNRGIPEISDIKSTIEKLLNKEYLERQDG 725
                   8**********************************************************985 PP

>> COX17  Cytochrome C oxidase copper chaperone (COX17)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.1    0.0014       8.5      15      43 ..      84     115 ..      82     117 .. 0.86
   2 ?    3.7   0.0     0.014        83      31      47 ..     302     318 ..     286     319 .. 0.87

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0014
       COX17  15 aRDeCilesgaeee...kCkelieahkaCmrs 43 
                  RD+C+   +++ +   +C+ +++++k+ m++
  EPX72697.1  84 LRDACLTSISQNMDqvnACSIVVRQWKQWMER 115
                 5*****99877766789**********99975 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.014
       COX17  31 kelieahkaCmrslGFk 47 
                 ++l+e + +C+ + GF+
  EPX72697.1 302 SQLVEPWSNCLTDIGFE 318
                 689*************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (731 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       951  (0.0530426); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.28s 00:00:00.94 Elapsed: 00:00:00.44
# Mc/sec: 4983.17
//
Query:       EPX72698.1  [L=795]
Description: plasma membrane alkali metal cation/H antiporter Sod22 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.5e-86  289.8  24.5      3e-86  289.6  24.5    1.0  1  Na_H_Exchanger  Sodium/hydrogen exchanger family
  ------ inclusion threshold ------
       0.03   13.6  40.6      0.072   12.3  21.3    2.9  3  Nha1_C          Alkali metal cation/H+ antiporter Nha1 C term
      0.053   13.6   0.3      0.053   13.6   0.3    3.4  4  YrhC            YrhC-like protein
      0.085   12.9   0.3       0.42   10.7   0.3    2.3  1  Insulin_TMD     Insulin receptor trans-membrane segment


Domain annotation for each model (and alignments):
>> Na_H_Exchanger  Sodium/hydrogen exchanger family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  289.6  24.5   6.6e-90     3e-86       2     379 ..      17     433 ..      16     435 .. 0.94

  Alignments for each domain:
  == domain 1  score: 289.6 bits;  conditional E-value: 6.6e-90
                     HHHHHHHHHHHH..H.HHHTTSXHHHHHHHHHHHHTTTTTS..........HHHCHCCHHHHCHHCCHHHHCTCGCCTGCCTHHHHHHHHHHHHH CS
  Na_H_Exchanger   2 vllillallvgl..l.arrlklpeivgliiaGlllGpsglglieps.....eedlevlselglilllFlaGleldlrelrknlksilllallgvl 88 
                     +l+++++l++++  +  ++++++e +++ i+Gl++Gp+  +++ p+     ++++ +l++++li+++F+aG+el++++++++++s+++++l++++
      EPX72698.1  17 ILGGFTSLFMLCslIiKEKFYMGEATIATICGLIFGPHAAKIFVPTswgnsDYITLELARILLIVQVFAAGVELPRAYMLRHWRSMVIMLLPVMV 111
                     6777887777777755*************************98888999999******************************************* PP

                     HHHHH.HHHHHH.HHTXTTCHHHHHHHHHHHTSSXHHHHHHHC....CCCTSTCCCCCCHHHHHHHHHHHCCCCCHHHHHHTXXXXXTSSSTSXH CS
  Na_H_Exchanger  89 itvvl.iGlllylllilgiplleallfgailsatdpvvvlailk...eegrvperlgtlllgesvlnDavavvllavllalakeeaggetsllll 179
                     + +++ +G++++l  i+ +++leal ++a+++atdpv++++i+    +++rvp +l+++ll+es++nD++a+++l++ l l+  + +++++ +++
      EPX72698.1 112 FGWLVcCGFMFAL--IPRLSFLEALTIAACITATDPVLASSIVGrgkFARRVPGHLRNMLLAESGCNDGMAIPFLYLGLYLIIDKPARHAGRDWV 204
                     *****55665554..9***************************9999******************************99999999********** PP

                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHS....CTHHHHHHHHHHHHHHHHHHHHHTSXXXHHHHHHHHHHHHH.HHHHHTTHHHH.HHHHHHHH CS
  Na_H_Exchanger 180 lliflvvavgglllglvigwllrlitrft....dddrelevllvlllallaallaellgvsgilgaflaGlvls.eyefsnklsek.lesfregl 268
                     lli+l+++v+g++lg+vig+++r++++f+      dre++++++++la +++++++++gv+++l++f+aG+++s + +fs+k++e+ ++++++ l
      EPX72698.1 205 LLIILYECVFGCFLGAVIGVVARKAIKFSerrgLMDRESFLVFYFVLAVFCSGIGTIIGVDDLLVSFCAGAAFSwDKWFSKKTEEShVSNVIDLL 299
                     ********************************99************************************************************* PP

                     HHHHHHHHHHHHSXHHHHHX...XHHHHHHHHHHHHHHHTHHHHHHHHHTTTX..SSXHHHHHHCC.CCSS.BHHHHHHHHHHHHHH...XHHHH CS
  Na_H_Exchanger 269 fnplfFvlvGlsldlkvlnn...hlsvlilvllilvaillgrilavflllrll..glslrealiig.fgglqrgavalalaalgpal...gllar 354
                     +n  fFv++G+ ++++ +     +lsv++lv+l++++++++ri+av+++++l+  ++++real++g fg++++ga++ +l+a+++++    ++ +
      EPX72698.1 300 LNLSFFVYIGAIMPWEQFHMpelDLSVWRLVVLAICVLIARRIPAVLAFKKLIpdIINWREALFAGhFGPIGVGAIYTCLLARAELEhdeTIP-T 393
                     **************8877448899******************************99*******************************886233.2 PP

                     ...............TTSSTTTCSTSXHHHHHHHHHHHHH CS
  Na_H_Exchanger 355 ...............elyallivvvlftvlvqGlslkpll 379
                                     +++++++ vl +++v+G+s+++++
      EPX72698.1 394 selptesdpnyyiitVMWPVVCFLVLSSIIVHGSSIAFFM 433
                     46666799999999677********************998 PP

>> Nha1_C  Alkali metal cation/H+ antiporter Nha1 C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3  21.3   1.6e-05     0.072     101     215 ..     495     624 ..     459     646 .. 0.59
   2 ?   12.3  15.4   1.6e-05     0.073     389     464 ..     591     688 ..     585     689 .. 0.63
   3 ?   -0.8   1.3      0.15   6.7e+02     368     408 ..     719     760 ..     702     789 .. 0.41

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.6e-05
      Nha1_C 101 seseeepessteeee.......seeesepesessatsseseeedeseseesp.............erkeekkeeeeppvevYqEGdkiIiEdeeGevl. 178
                 +e+ee    s + ++       +         +++   es++ed++e++e+p              ++e+++ee +p  e Y  Gd+++ Ed +G+++ 
  EPX72698.1 495 QEDEE----SVDASSsisaprpA-------HVRPQH-VESHPEDRDEQNEEPvpaikdydgerriSNEEDREEEVNPGNESYMMGDDLVQEDSQGNIIs 581
                 22222....22222212212221.......111111.111122233333333345555666555556778888889999*******************8 PP

      Nha1_C 179 .......evedkpkeeeeereksskseksshsleslkrrlsevs 215
                        + e++p+ee+e+  +++++++ s++ ++++r +++++
  EPX72698.1 582 rsrsgadHAERSPDEEKESA-QEEEASNDSKPQSKFRRFFKNIH 624
                 88888765556666555553.33446677779999999988886 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 1.6e-05
      Nha1_C 389 eseedeeeesseedsssdeeseeee..........taaerrrrlaalessededseddgt.............eegETaaERrRRlaALGelsadedde 464
                 e++ dee+es++e+++s+ +s+ ++           a er   + ++++++ +++e + +             +++E ++ER+RR+  LG++ ++ed+ 
  EPX72698.1 591 ERSPDEEKESAQEEEASN-DSKPQSkfrrffknihEAFERNYHAPDSDERDLGQEEASIEnnvprremsrsdaYSRENSVERQRREEVLGNMGDSEDEV 688
                 333333333333333333.333344578899988766666666555555555444444447778888888888*******************9988876 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 0.15
      Nha1_C 368 ltpapkerkeasqases.eeseeseedeeeesseedsssdee 408
                 l+p p + +++ ++s + +e   ++e++++e+ +ed+s++++
  EPX72698.1 719 LSPYPLSARSPIEQSPDrSELTINNEENDDEEVDEDDSQQNK 760
                 444444222222222220222222222222222222222222 PP

>> YrhC  YrhC-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.5       1.5   6.5e+03      15      50 ..      76     110 ..      73     122 .. 0.56
   2 ?    0.4   0.1      0.16   7.2e+02      23      47 ..     183     209 ..     180     235 .. 0.53
   3 ?   13.6   0.3   1.2e-05     0.053      17      60 ..     299     341 ..     296     347 .. 0.70
   4 ?   -2.4   0.1       1.2   5.4e+03      42      60 ..     409     427 ..     398     435 .. 0.67

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.5
        YrhC  15 fvLLalsaFLyiGlviPseaketlkksillgaivvf 50 
                  +LL++ +F   G+ +P  ++  + +s++++   v+
  EPX72698.1  76 RILLIVQVF-AAGVELPRAYMLRHWRSMVIMLLPVM 110
                 578888887.45777777554444443333333333 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.16
        YrhC  23 FLyiGl..viPseaketlkksillgai 47 
                 FLy+Gl  +i + a ++    +ll + 
  EPX72698.1 183 FLYLGLylIIDKPARHAGRDWVLLIIL 209
                 999996325555444444444433333 PP

  == domain 3  score: 13.6 bits;  conditional E-value: 1.2e-05
        YrhC  17 LLalsaFLyiGlviPseaketlkksillgaivvfLllaflflrr 60 
                 LL ls F yiG+++P e+ +  +   l +  +v+L++ +l++rr
  EPX72698.1 299 LLNLSFFVYIGAIMPWEQFHMPE-LDLSVWRLVVLAICVLIARR 341
                 9**************96555433.33455555666666666665 PP

  == domain 4  score: -2.4 bits;  conditional E-value: 1.2
        YrhC  42 illgaivvfLllaflflrr 60 
                 ++ ++++ ++l +++++  
  EPX72698.1 409 VMWPVVCFLVLSSIIVHGS 427
                 5666666666666655544 PP

>> Insulin_TMD  Insulin receptor trans-membrane segment
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.3   9.4e-05      0.42       8      41 ..     399     436 ..     396     438 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 9.4e-05
  Insulin_TMD   8 yldpsnivkIvigPviciillllvig....avfvvvkK 41 
                   +dp++ +  v+ Pv+c+++l+ +i+    ++f ++ K
   EPX72698.1 399 ESDPNYYIITVMWPVVCFLVLSSIIVhgssIAFFMLGK 436
                  5799999999*************997333345666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (795 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1055  (0.0588432); expected 358.6 (0.02)
Passed bias filter:                      508  (0.028334); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.75u 0.30s 00:00:01.05 Elapsed: 00:00:00.46
# Mc/sec: 5148.01
//
Query:       EPX72699.1  [L=419]
Description: dipeptidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   1.5e-103  346.4   0.0   1.7e-103  346.2   0.0    1.0  1  Peptidase_M19  Membrane dipeptidase (Peptidase family M19)


Domain annotation for each model (and alignments):
>> Peptidase_M19  Membrane dipeptidase (Peptidase family M19)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  346.2   0.0  9.5e-108  1.7e-103       3     318 ..      66     397 ..      64     398 .. 0.98

  Alignments for each domain:
  == domain 1  score: 346.2 bits;  conditional E-value: 9.5e-108
                    HCCS.EEEEEE-HHHHHHHCTTTTT..-TTTHCTSSS-HHHHHHHTEEEEEEEEE--C............CCCCCCHHHHHHHHHHHHHHHHHHGT CS
  Peptidase_M19   3 lkkliviDghndlplklrqekkesl..llekdselqtdlerlraggvsavlfaifvpe............dasyeeavkatleqidlirrlvrknp 84 
                    l+++++iDghnd+p+ +r++ +++l     +++ ++td++rlr g++++++++ fv++            +  ++eav++tl+q+d+i+r+++k+p
     EPX72699.1  66 LTHFPLIDGHNDFPTFIREKYDNKLadRDLHHATGHTDIQRLRTGHMGGQFWSGFVECpplvsdsnlawnRSGEHEAVQQTLQQLDIIKRMIEKYP 161
                    6799*******************9988888999************************************98899********************** PP

                    TTEEE-SSHHHHHHHHHTT-EEEEEEEESCGGGTT-HHHHHHHHHTTEEEEES-SSS-BSSB-BCCGTT.SSSSB-HHHHHHHHHHHHHT-EEE-T CS
  Peptidase_M19  85 eqlklvrtaddierakkegkiavllgiegaealgddlallrafyalGvrvlgltynrnnkfAdgaleekdedgGLsefGkelVrelNrlgiliDlS 180
                    ++++l+++ d+++ ++ + +i +++gieg++++  + + lr++y++Gvr+++l++n++n fAd+a   k+ +gGLse+G++l+re+Nrlg+++DlS
     EPX72699.1 162 QDFSLTTKHDQVKYNFLQKRISSMIGIEGLHQIAGSPSILRRYYEMGVRYATLAHNCDNVFADAAVGGKQVNGGLSEAGRALIREMNRLGMIVDLS 257
                    ************************************************************************************************ PP

                    TB-HHHHHHHHHH-SSE.EECCEEBTTTS--TTSB-HHHHHHHHHTT-EEEE-SSHHHCTTT.S--BHHHHHHHHHHHHHHT-.GGGEEE---TTT CS
  Peptidase_M19 181 hlsektfldvlelSkaPvvaSHSnaralcdhpRNltDeqlkaiaesgGvvgvtfvpaflkek.aeatledvvdhidyivelaG.idhVGlGsDfdg 274
                    h++ + ++++l++S aP+ +SHS+a+a+++hpRN++D++l +++es+Gvv+v+f+p+f++++  ++tle+vv+hi++i+++ G ++h+GlG Dfdg
     EPX72699.1 258 HVTPEVMHQTLDISVAPAFFSHSSAKAVHNHPRNVPDDVLLRVKESDGVVMVNFYPNFISPTpGNTTLETVVEHIQHIAKVTGsYRHIGLGADFDG 353
                    *************************************************************96799*****************899********** PP

                    TSS-BBTBSSGGGHHHHHHHHHHTTS-HHHHHHHHTHHHHHHHH CS
  Peptidase_M19 275 ggelpegledvsklpnltaeLlrrgyseadiekilggNflrvle 318
                    ++ +p gledvsk+p l  +L++ g s +d+ +i+ggN+lrv++
     EPX72699.1 354 IESVPRGLEDVSKYPALFTRLADLGLSIKDLINIAGGNILRVWK 397
                    *******************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (419 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       602  (0.0335769); expected 358.6 (0.02)
Passed bias filter:                      577  (0.0321825); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 2886.67
//
Query:       EPX72700.1  [L=437]
Description: 19S proteasome regulatory subunit Rpt5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.5e-41  141.2   0.3    2.2e-40  138.1   0.0    2.3  2  AAA              ATPase family associated with various cellul
    3.4e-19   68.5   0.1    7.3e-19   67.5   0.1    1.6  1  Prot_ATP_ID_OB   Proteasomal ATPase OB C-terminal domain
    2.1e-11   43.4   0.0    4.3e-11   42.4   0.0    1.6  1  AAA_lid_3        AAA+ lid domain
    1.1e-05   25.7   0.0    9.5e-05   22.6   0.0    2.2  2  AAA_2            AAA domain (Cdc48 subfamily)
    1.1e-05   25.8   1.1     0.0079   16.6   0.0    3.0  3  AAA_16           AAA ATPase domain
      3e-05   24.1   1.2    0.00021   21.3   0.1    2.8  2  AAA_5            AAA domain (dynein-related subfamily)
    0.00031   21.0   0.3      0.088   13.1   0.0    3.1  3  AAA_22           AAA domain
    0.00071   19.4   0.0     0.0022   17.8   0.0    1.7  2  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
  ------ inclusion threshold ------
      0.011   15.9   0.0      0.031   14.5   0.0    1.8  2  AAA_33           AAA domain
      0.014   15.2   1.2        0.2   11.4   0.0    2.4  2  AAA_11           AAA domain
      0.015   15.1   0.1      0.038   13.7   0.0    1.7  2  IstB_IS21        IstB-like ATP binding protein
      0.015   14.7   0.1      0.048   13.0   0.1    1.8  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
      0.015   14.7   0.0      0.062   12.7   0.0    2.0  2  PhoH             PhoH-like protein
      0.028   13.8   0.2       0.12   11.7   0.0    2.0  2  ATPase           KaiC
      0.035   13.3   0.0      0.083   12.0   0.0    1.9  1  DUF815           Protein of unknown function (DUF815)
      0.057   12.9   0.0       0.17   11.4   0.0    1.8  1  AAA_7            P-loop containing dynein motor region
       0.06   13.1   0.7       0.18   11.5   0.1    2.2  3  AAA_24           AAA domain
        0.1   12.3   0.0       0.37   10.5   0.0    1.9  1  Sigma54_activat  Sigma-54 interaction domain
       0.14   12.5   0.0       0.64   10.4   0.0    2.2  1  RNA_helicase     RNA helicase


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.2       0.9   8.5e+02      64      95 ..       4      37 ..       3      55 .. 0.76
   2 !  138.1   0.0   2.3e-43   2.2e-40       2     132 .]     222     354 ..     221     354 .. 0.96

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.9
                EETGGGHHHHH..TTCCCHHHHHHHHHHHHHHHH CS
         AAA 64 iDEidalaksr..sgseseeeervvnqLlteldg 95
                ++E+dal++s+  ++s++++ + + +++l++ ++
  EPX72700.1  4 LEELDALNGSQqpESSHDDFMDGIEQEILNANSE 37
                68********987777777777777777766554 PP

  == domain 2  score: 138.1 bits;  conditional E-value: 2.3e-43
                 EEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHH...TTCCCHHHHHHHHHHHHHHHHTT CS
         AAA   2 llyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr...sgseseeeervvnqLlteldgvk 97 
                 l+yGppGtGKTlla+a a +++++fl++ +++l+++++g+++k +r+ f+ akek+ p i+fiDE+da++++r   +++ ++e +r++ +Ll++ldg++
  EPX72700.1 222 LMYGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKS-PAIIFIDELDAIGTKRfdsEKAGDREVQRTMLELLNQLDGFS 319
                 89*****************************************************9.*****************9777799999*************** PP

                 TSSSTEEEEEEESSGGGSTHHHHS.TTSSEEEETTS CS
         AAA  98 kkeskvivigatnrpdkldpallr.gRfdrkieiel 132
                 ++ ++v v++atnr+d+ldpallr gR+drk+e++l
  EPX72700.1 320 SD-DRVKVVAATNRVDTLDPALLRsGRLDRKLEFPL 354
                 *7.66***************************9985 PP

>> Prot_ATP_ID_OB  Proteasomal ATPase OB C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.5   0.1   7.7e-22   7.3e-19       1      57 []      88     163 ..      88     163 .. 0.99

  Alignments for each domain:
  == domain 1  score: 67.5 bits;  conditional E-value: 7.7e-22
                     EEEEEEE-TT...................SSEEEEE-TTS-EEEEEE-GGGSSST--TTEEEEEETTTTEEEEEE- CS
  Prot_ATP_ID_OB   1 VatVsEvldd...................teraiVktssdeevvvslagavpremLrpgDlVavdkdtgfifEkLP 57 
                     V++V+E+ld                    +++a++kts++++++++l g+v +e+L pgDl++v+kd+++i +kLP
      EPX72700.1  88 VGNVVEILDMpseeedaqesvnqnsearvGKSAVIKTSTRQTIFLPLIGLVEPEELHPGDLIGVNKDSYLIIDKLP 163
                     9**************************************************************************9 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.4   0.0   4.6e-14   4.3e-11       1      45 []     376     420 ..     376     420 .. 0.97

  Alignments for each domain:
  == domain 1  score: 42.4 bits;  conditional E-value: 4.6e-14
   AAA_lid_3   1 dvdlkeLAerTeGySGADlaalcreAallAlrrgikeitmedfee 45 
                 d++++eLA+ T+ y GA l+++c eA++ Alr+g ++it e+f++
  EPX72700.1 376 DINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKITHEHFMD 420
                 89*****************************************75 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.2      0.92   8.7e+02     129     166 ..      57      89 ..      35     121 .. 0.55
   2 !   22.6   0.0     1e-07   9.5e-05       7     104 ..     222     313 ..     217     325 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.92
                 -TTHHHHTTTS-STTTTSGGG--HHHHHHTT--HHHHT CS
       AAA_2 129 fgsskisdesrskeeeeekkkeeveeelkkglipEllg 166
                 f+  + ++     ++  ek+ke+ e+  ++++ p l+g
  EPX72700.1  57 FQRLTHEK-----STMVEKTKENQEKVANNKMLPYLVG 89 
                 44333333.....2223333334444444444444333 PP

  == domain 2  score: 22.6 bits;  conditional E-value: 1e-07
                 EEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTS..EEEEETGGG-------------HHHHHHHHHHH CS
       AAA_2   7 lllgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG..ivllDEidKihpkessgadvSregVqrdLLqil 103
                 l+ gp g+Gkt+la+a a   ++    ++  + a +l +      + +  +  +++   a+e+   i+++DE+d i  k+  ++     +Vqr +L +l
  EPX72700.1 222 LMYGPPGTGKTLLARACAAQSNA----TFLKLAAPQLVQ----MFIGDGAKLVRDAFALAKEKSpaIIFIDELDAIGTKRFDSEKAGDREVQRTMLELL 312
                 789*****************996....999999999999....66667666667777766666667************99999999999********99 PP

                 H CS
       AAA_2 104 e 104
                  
  EPX72700.1 313 N 313
                 6 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1       2.7   2.6e+03      32      43 ..     113     124 ..     112     130 .. 0.79
   2 !   16.6   0.0   8.3e-06    0.0079      24      56 ..     218     247 ..     205     262 .. 0.78
   3 ?    6.4   0.0     0.011        10     122     149 ..     265     296 ..     260     327 .. 0.67

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 2.7
      AAA_16  32 esGvGKsslvre 43 
                 e+ vGKs+++++
  EPX72700.1 113 EARVGKSAVIKT 124
                 5789*****976 PP

  == domain 2  score: 16.6 bits;  conditional E-value: 8.3e-06
      AAA_16  24 pelvllsGesGvGKsslvrellralekdggifl 56 
                 p  +l +G++G+GK+ l+r+++ + +++   fl
  EPX72700.1 218 PKGCLMYGPPGTGKTLLARACAAQSNAT---FL 247
                 5789*****************9765544...55 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.011
      AAA_16 122 llkrllallsrderplvlvlDdlq.....wade 149
                 l+++++al+++ ++p ++++D+l+     ++d+
  EPX72700.1 265 LVRDAFALAKE-KSPAIIFIDELDaigtkRFDS 296
                 56677788888.889*********777774443 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.2       1.2   1.2e+03      72     107 ..      25      57 ..      19      88 .. 0.65
   2 !   21.3   0.1   2.2e-07   0.00021       2     136 ..     221     342 ..     220     343 .. 0.78

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 1.2
                 ESGGG--HHHHHHHHHHHHSSEEE..-SSSEEE--- CS
       AAA_5  72 DEveraesevlnsLlslleerrllleeggelvkakn 107
                 D++e   +e+ln+    l+ r++lle+  +++k + 
  EPX72700.1  25 DGIE---QEILNANSEELNSRTRLLENDIKVMKSEF 57 
                 5555...77777777777777777777766666543 PP

  == domain 2  score: 21.3 bits;  conditional E-value: 2.2e-07
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------G-SEEEEESGGG--HHHHHHHHHH.HHSSEEE..-S CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraaregeilvlDEveraesevlnsLlsl.leerrllleeg 99 
                  l+ GppGtgK+ la+  aa  n++++  + ++      l++     +g +  +d  +  + ++++i+++DE++ + ++ ++s      e +r +le +
  EPX72700.1 221 CLMYGPPGTGKTLLARACAAQSNATFLKLAAPQ------LVQMFI-GDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGdREVQRTMLELL 312
                 589****************99999999777776......777666.58888888888888888*************98888876443144455555666 PP

                 SSEEE---......-EEEEEESS--.-TT-TTHHHHT CS
       AAA_5 100 gelvkaknddllerfrviatanpldrslnelspalrs 136
                 ++l ++++dd   r+ v+a++n++d     l+pal++
  EPX72700.1 313 NQLDGFSSDD---RVKVVAATNRVD----TLDPALLR 342
                 6666666654...699999999999....88888865 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       2.5   2.4e+03      14      28 ..     114     128 ..     113     144 .. 0.88
   2 !   13.1   0.0   9.3e-05     0.088       9      29 ..     222     242 ..     216     259 .. 0.81
   3 ?    3.9   0.1     0.065        62      87     126 ..     274     327 ..     260     334 .. 0.71

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 2.5
      AAA_22  14 sGtGKTtllrrlleq 28 
                 + +GK+ ++++ ++q
  EPX72700.1 114 ARVGKSAVIKTSTRQ 128
                 679******998877 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 9.3e-05
      AAA_22   9 vvtGesGtGKTtllrrlleql 29 
                 + +G++GtGKT+l+r  + q 
  EPX72700.1 222 LMYGPPGTGKTLLARACAAQS 242
                 679************999986 PP

  == domain 3  score: 3.9 bits;  conditional E-value: 0.065
      AAA_22  87 raravielliiDEaqhlr.....s.........eealeeLrsllnl.srkgvqli 126
                 ++++ ++++ iDE + +      s          ++le L +l  + s++ v+++
  EPX72700.1 274 KEKS-PAIIFIDELDAIGtkrfdSekagdrevqRTMLELLNQLDGFsSDDRVKVV 327
                 3333.599*********87655516677777888888888777766666666665 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   2.3e-06    0.0022      36      94 ..     221     287 ..     215     294 .. 0.73
   2 ?   -2.9   0.0       5.4   5.1e+03      21      38 ..     324     341 ..     319     344 .. 0.72

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 2.3e-06
      RuvB_N  36 vllyGpPGlGkttlakiiakelgvklkitsgPvleka..gdlaal......ltnleekdvlfideih 94 
                 +l+yGpPG Gkt la+  a++ ++++   ++P l +   gd a l      l++ ++  ++fide+ 
  EPX72700.1 221 CLMYGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMfiGDGAKLvrdafaLAKEKSPAIIFIDELD 287
                 69************************99999998764336655551111113344555789999976 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 5.4
      RuvB_N  21 ifieaakkreealdhvll 38 
                 + + aa +r ++ld  ll
  EPX72700.1 324 VKVVAATNRVDTLDPALL 341
                 667788888888887776 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       5.1   4.8e+03      67      78 ..      60      71 ..      29     127 .. 0.55
   2 ?   14.5   0.0   3.2e-05     0.031       3      29 ..     222     248 ..     221     312 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 5.1
      AAA_33 67 lsagrnvildat 78
                l++++++++  t
  EPX72700.1 60 LTHEKSTMVEKT 71
                444444444444 PP

  == domain 2  score: 14.5 bits;  conditional E-value: 3.2e-05
      AAA_33   3 llvGlpGsGKstlaerllkklgavlls 29 
                 l+ G+pG+GK+ la+  +++  a++l 
  EPX72700.1 222 LMYGPPGTGKTLLARACAAQSNATFLK 248
                 799*************99998866543 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   1.2      0.21     2e+02      81     147 ..      48      75 ..       9     132 .. 0.45
   2 ?   11.4   0.0   0.00021       0.2      19      42 ..     220     243 ..     205     389 .. 0.75

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.21
      AAA_11  81 segekykpkivRvgneeeriseavksvsleekvekrlekeekaqlakeiskeleklakelrafeeee 147
                 ++ ++ k ++ R+ +e+                                       ++++++++e++
  EPX72700.1  48 NDIKVMKSEFQRLTHEK---------------------------------------STMVEKTKENQ 75 
                 11111111111111111.......................................11111111111 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00021
      AAA_11  19 itliqGPPGtgKTktivellsqll 42 
                  +l+ GPPGtgKT    +  +q +
  EPX72700.1 220 GCLMYGPPGTGKTLLARACAAQSN 243
                 589**********98888888876 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       5.7   5.3e+03     122     147 ..     100     125 ..      56     128 .. 0.61
   2 ?   13.7   0.0   4.1e-05     0.038      48      71 ..     219     242 ..     205     301 .. 0.78

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 5.7
   IstB_IS21 122 ldqaeaellfeviekryerrsiiits 147
                  +++++e + +  e+r++++++i ts
  EPX72700.1 100 EEEDAQESVNQNSEARVGKSAVIKTS 125
                 34555666666677777777777776 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 4.1e-05
   IstB_IS21  48 enivllGpsGvGKshlaialgvea 71 
                 +++++ Gp+G+GK+ la a + + 
  EPX72700.1 219 KGCLMYGPPGTGKTLLARACAAQS 242
                 67999************9988765 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   5.1e-05     0.048      25      42 ..     221     238 ..     217     245 .. 0.89
   2 ?   -3.0   0.0         4   3.8e+03      91     121 ..     259     292 ..     255     298 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 5.1e-05
  Mg_chelatase  25 lllvGppGsGKtmlakrl 42 
                    l++GppG+GKt+la++ 
    EPX72700.1 221 CLMYGPPGTGKTLLARAC 238
                   59*************975 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 4
  Mg_chelatase  91 vGggskpkpGeislahn...GvLfLDElpefkrk 121
                   +G g+k    + +la++    ++f+DEl  + +k
    EPX72700.1 259 IGDGAKLVRDAFALAKEkspAIIFIDELDAIGTK 292
                   777777777777777653336999**99877655 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   6.6e-05     0.062      23      43 ..     222     242 ..     205     248 .. 0.88
   2 ?   -2.2   0.0       2.5   2.4e+03      76     115 ..     304     343 ..     296     349 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 6.6e-05
                 EEE--TTSSTTHHHHHHHHHH CS
        PhoH  23 faiGpaGtGKtylavalavea 43 
                  + Gp GtGKt+la a+a++ 
  EPX72700.1 222 LMYGPPGTGKTLLARACAAQS 242
                 689***************985 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 2.5
                 --TTTHHHHHHHTTTS-TTCHHHHHHTTSEEEEEGGGGTT CS
        PhoH  76 vdpylrplydaLkdllgaekvekllekgkievaplaymRG 115
                 v+  +  l ++L+ + ++++v+ +  ++++ +++ a +R 
  EPX72700.1 304 VQRTMLELLNQLDGFSSDDRVKVVAATNRVDTLDPALLRS 343
                 5666778889999999999999999999999999999984 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1       1.6   1.5e+03      63      94 ..      46      77 ..      33     103 .. 0.52
   2 ?   11.7   0.0   0.00013      0.12       6      38 ..     205     237 ..     203     246 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 1.6
      ATPase 63 lrenakslGwdlekleeegklaiidasesaee 94
                l +++k +  ++++l +e + ++  + e++e+
  EPX72700.1 46 LENDIKVMKSEFQRLTHEKSTMVEKTKENQEK 77
                34445555555555555533333322222222 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 0.00013
      ATPase   6 eglDeilkgGipegrvvlitGepGtGKtifalq 38 
                 + +D++ + Gi   +  l++G pGtGKt++a  
  EPX72700.1 205 QQFDKFQNLGIKPPKGCLMYGPPGTGKTLLARA 237
                 579999999*********************976 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   8.8e-05     0.083      51     116 ..     216     286 ..     168     383 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 8.8e-05
      DUF815  51 lpannvLLwGarGtGKSslvkallneyaeegLrli..evekedlkelpklve...llrerperfilfvDDL 116
                 +p +  L++G  GtGK  l +a+ ++ +++ L+l   ++ +  + +  klv+   +l++++   i+f+D L
  EPX72700.1 216 KPPKGCLMYGPPGTGKTLLARACAAQSNATFLKLAapQLVQMFIGDGAKLVRdafALAKEKSPAIIFIDEL 286
                 566789************************98875334555555665565542226888999999999988 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00018      0.17      27     109 ..     212     286 ..     197     300 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00018
       AAA_7  27 elllknkkpvllvGptGtGKtviikdllkkldkekylsltinfsaqtsanqlqdiiesklekrrkgvygPpggkklvvFvDDl 109
                 +l +k  k +l++Gp GtGKt++++ +  + +         +f +   ++ +q +i +  +  r     ++ +   ++F+D+l
  EPX72700.1 212 NLGIKPPKGCLMYGPPGTGKTLLARACAAQSN--------ATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDEL 286
                 5566777899*************999777666........3333344455555555555555554444555555555555555 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       5.1   4.8e+03      96     121 ..      48      74 ..      20      97 .. 0.61
   2 ?   -3.0   0.0       5.3     5e+03      11      29 ..     114     132 ..     111     134 .. 0.81
   3 ?   11.5   0.1    0.0002      0.18       5      29 ..     221     247 ..     218     336 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 5.1
      AAA_24  96 edkgdgkG.ygelaeefrrllkklqel 121
                 +d++ +k  +++l++e + +++k +e 
  EPX72700.1  48 NDIKVMKSeFQRLTHEKSTMVEKTKEN 74 
                 445555555555555555555554444 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 5.3
      AAA_24  11 sgiGKTtlakelgpkplfi 29 
                 + +GK+ ++k+ + +++f+
  EPX72700.1 114 ARVGKSAVIKTSTRQTIFL 132
                 679****999998888876 PP

  == domain 3  score: 11.5 bits;  conditional E-value: 0.0002
      AAA_24   5 iliyGpsgiGKTtlakel..gpkplfi 29 
                 +l+yGp+g+GKT la+    + ++ f+
  EPX72700.1 221 CLMYGPPGTGKTLLARACaaQSNATFL 247
                 789***********9987665555555 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00039      0.37      22      48 ..     218     244 ..     201     258 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00039
                      SS-EEEECSTTSSHHHHHHHHHHHSTT CS
  Sigma54_activat  22 dlsvlitGesGtGKellaraiheaskr 48 
                      +  +l+ G  GtGK+llara+ ++s+ 
       EPX72700.1 218 PKGCLMYGPPGTGKTLLARACAAQSNA 244
                      4678****************9988864 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00068      0.64       2      21 ..     222     241 ..     221     293 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00068
  RNA_helicase   2 wlyGpsgeGKStlakeLaka 21 
                   ++yGp+g+GK++la+  a++
    EPX72700.1 222 LMYGPPGTGKTLLARACAAQ 241
                   79************995544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (437 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1112  (0.0620224); expected 358.6 (0.02)
Passed bias filter:                      623  (0.0347482); expected 358.6 (0.02)
Passed Vit filter:                       101  (0.00563333); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              19  [number of targets reported over threshold]
# CPU time: 0.64u 0.28s 00:00:00.92 Elapsed: 00:00:00.46
# Mc/sec: 2854.72
//
Query:       EPX72701.1  [L=240]
Description: hypothetical protein SOCG_00463 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.63   10.1   3.1       0.26   11.3   0.5    1.6  2  PgaD      PgaD-like protein


Domain annotation for each model (and alignments):
>> PgaD  PgaD-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1      0.22     4e+03       7      41 ..      55      90 ..      52     103 .. 0.62
   2 ?   11.3   0.5   1.4e-05      0.26      30      96 ..     134     200 ..     131     207 .. 0.74

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.22
        PgaD  7 rllpwskrlldsilTllaWa.gwiyLfvpllvllaw 41
                ++   s  +  s +T   W+ + i+ f +ll  l+ 
  EPX72701.1 55 HSAQESTNITGSNSTYSKWVsANIFFFLRLLSTLGL 90
                555555566666677777764456777777766554 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 1.4e-05
        PgaD  30 yLfvpllvllawllglelfeaeillglfseasasevegslseletlrlYalilvviavlLilWakln 96 
                 yLf+++  +l +l+   + +a + +  +s ++ +++    ++++++++Y++++v +av +++W+   
  EPX72701.1 134 YLFTQIGRVLSNLCVAVICTASLDVTCYSVYYFVKKIIEFEKMNDIAFYGICIVNVAVFVLIWSTTD 200
                 6666666666666665566666666667777777777777899********************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       689  (0.0384294); expected 358.6 (0.02)
Passed bias filter:                      407  (0.0227007); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.28s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 1617.03
//
Query:       EPX72702.1  [L=804]
Description: kinesin-like protein Pkl1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.8e-99  332.9   0.4    1.8e-99  332.9   0.4    2.2  3  Kinesin         Kinesin motor domain
    8.8e-56  188.0   0.0    8.8e-56  188.0   0.0    2.8  2  Microtub_bd     Microtubule binding
  ------ inclusion threshold ------
       0.38   11.0   5.2        1.1    9.5   0.1    3.7  3  AAA_22          AAA domain


Domain annotation for each model (and alignments):
>> Kinesin  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.2      0.51   3.1e+03     155     185 ..     173     203 ..     147     220 .. 0.50
   2 ?   -4.1   2.2      0.98   5.9e+03      39      59 ..     286     306 ..     240     381 .. 0.50
   3 !  332.9   0.4    3e-103   1.8e-99       1     331 [.     450     786 ..     450     788 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 0.51
                 EEEECTTSCCEEETTS--EEESSHHHHHHHH CS
     Kinesin 155 kiredskkgevyvkgltevevksaeevlell 185
                 ++ e++++++  ++ l e + k+ e + +l 
  EPX72702.1 173 SLAEKDNRHQSEIHSLLESSEKDKELLNTLK 203
                 3444444444445544444444443333333 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 0.98
                 SCEEEEESEEEETTS-HHHHH CS
     Kinesin  39 eekkfkFdkvfdeeatqeevy 59 
                 +++ f  +k+++ + +++ vy
  EPX72702.1 286 SKRIFDLKKAYETQLQEKVVY 306
                 333333333333333322222 PP

  == domain 3  score: 332.9 bits;  conditional E-value: 3e-103
                 EE-SSSHHHHTTTTEBCEEEEC...........TCTCEEEEEEEEECTTSCEEEEESEEEETTS-HHHHHHHHHHHHHHHHHTTSEEEEEEEESTTSSH CS
     Kinesin   1 RvRplnekekeeeeeeevevee...........ekkeeekkskkenkeeeekkfkFdkvfdeeatqeevyeetakplvesvleGynatifaYGqtgsGK 88 
                 R+Rp+ ++e+++ ee e   +              k  +++s+  + ++++  f+Fd+vf++eat+e v++e+  +lv+s+++Gyn++ifaYGqtgsGK
  EPX72702.1 450 RIRPFLPREQQQLEELESIFHYpdshsleprelLLKGPTVESSLGHVHDKNYFFSFDRVFSPEATNEAVFQEI-THLVQSAIDGYNVSIFAYGQTGSGK 547
                 899999999988887776555577999999998888899999999***************************5.9************************ PP

                 HHHHTBCTTTSBSHHHHHHHHHHHHHHHCTTTHEEEEEEEEEEEEEETTEEEETTSTTTTSTSSEBEEEECTTSCCEEETTS--EEESSHHHHHHHHHH CS
     Kinesin  89 TyTmegkeeeeeGiipraleelFesikkekeekekefsvkvsylEiYneeiyDLLeskkskkkkklkiredskkgevyvkgltevevksaeevlellek 187
                 +yTm  +    +G++ ra++++Fe ++  ke+  ++++++ ++lEiYne+iyDLL+++   +++k +i++d+++++++v++++ +++++ e v+++l k
  EPX72702.1 548 SYTMLSN----DGMVTRAVKQIFEYVELLKEK-GWNYKLQGQFLEIYNERIYDLLDKQGLMQQQKHDIHHDERERRTIVDNVRVIDFENEEMVYKMLGK 641
                 *****96....7**************999987.9************************98888889********************************* PP

                 HHHHHTSTTSSCTSHHCCSEEEEEEEEEEEETTTTTCEEEEEEEEEEEEEEECCCHHHHSSTCHHHHHHHHHHHHHHHHHHHHHHHHHHT.....CCTS CS
     Kinesin 188 geknrkvaetklneeSSRSHavftitleqknlkeeteekvkisklnLvDLAGsErasktgaaegerlkEaaniNkSLlaLgrvisaLaek.....kksk 281
                 +++nr +a+tk+ne+SSRSH+vft+ +   n++    +++ +++lnLvDLAGsEr+s ++ aegerl+E+++iNkSL++Lg+vi+aL        k ++
  EPX72702.1 642 AAENRFIAATKANERSSRSHTVFTLYIDGWNESM---KQICRGTLNLVDLAGSERLSFSQ-AEGERLRETQAINKSLSCLGDVIHALGVAtyvsgKGNN 736
                 *****************************99663...3579*******************.58************************99999999**** PP

                 TSCGGGSHHHHHTGGGHSSSSEEEEEEEE-TBGGGHHHHHHHHHHHHHHC CS
     Kinesin 282 hipYRdSkLTrlLqdsLgGnsktlmivtvspssenleetlstlkfaerak 331
                 hipYR+SkLT lL+ +Lg n+ktlm+v+vsp ++++ +tl++l+fa++++
  EPX72702.1 737 HIPYRNSKLTYLLRYALGENAKTLMFVNVSPLKSQIMDTLNSLRFAKKVN 786
                 ***********************************************987 PP

>> Microtub_bd  Microtubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -6.0   9.8         3   1.8e+04       3     102 ..     244     352 ..     242     382 .. 0.56
   2 !  188.0   0.0   1.5e-59   8.8e-56       3     149 .]     426     597 ..     424     597 .. 0.93

  Alignments for each domain:
  == domain 1  score: -6.0 bits;  conditional E-value: 3
                  HHHHHHHHCHHHHHHHCTB-EEEE.EEECCCS-..T.EEEETTT............TTTEEEE-SEEEECTTHCCCCCCCCHHHHHHHHTT--EEEEE CS
  Microtub_bd   3 keetlRrkleNtiqelkGniRvfa.rvrpeles..ekakikfpe.........eekkkkkefsFdrvfeseseqeevfeeisqlvqsaldgynvcifa 88 
                  +ee++R+kle ++q +  ++R    +++ e ++  e+++ +f++         e++ ++k   F++ +++ + qe+  +e+   ++  l+++n     
   EPX72702.1 244 HEEKNRKKLERELQRQIVHVREQIiNITAEYKNsfEELQKSFSKrifdlkkayETQLQEKVVYFQKRIDEGKLQENNSKEY---HELLLSEKNREFER 338
                  688889999988887766666432023322222122344444434555555665566666666777777777666555544...44456666666666 PP

                  EES........... CS
  Microtub_bd  89 ygqTGsGKtyTmeg 102
                  y+q    K  Tm+g
   EPX72702.1 339 YQQKMEAKISTMKG 352
                  66666666666666 PP

  == domain 2  score: 188.0 bits;  conditional E-value: 1.5e-59
                  HHHHHHHHCHHHHHHHCTB-EEEEEEECCCS-T........EEEETTT........................TTTEEEE-SEEEECTTHCCCCCCCCH CS
  Microtub_bd   3 keetlRrkleNtiqelkGniRvfarvrpelesek.......akikfpe.....................eekkkkkefsFdrvfeseseqeevfeeis 72 
                   eetlRr+l+NtiqelkGniRvf+r+rp l +e+         +++p+                     + ++k++ fsFdrvf++e+++e vf+ei+
   EPX72702.1 426 AEETLRRQLHNTIQELKGNIRVFCRIRPFLPREQqqleeleSIFHYPDshsleprelllkgptvesslgHVHDKNYFFSFDRVFSPEATNEAVFQEIT 523
                  799*****************************885666655444455366777888999999999****999************************** PP

                  HHHHHHHTT--EEEEEEES................ST-HCHHHHHHHHHHCCTSCCCCEEEEEEEEEEESS-EEETT CS
  Microtub_bd  73 qlvqsaldgynvcifaygqTGsGKtyTmegeeeeagmipraveeifetiselkekgwkyeielqfveiynekvqDlL 149
                  +lvqsa+dgynv+ifaygqTGsGK+yTm +   ++gm++rav++ife ++ lkekgw+y++++qf+eiyne+++DlL
   EPX72702.1 524 HLVQSAIDGYNVSIFAYGQTGSGKSYTMLS---NDGMVTRAVKQIFEYVELLKEKGWNYKLQGQFLEIYNERIYDLL 597
                  ******************************...*******************************************8 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   1.0      0.22   1.3e+03      44      90 ..     214     264 ..     163     271 .. 0.56
   2 ?    9.5   0.1   0.00018       1.1       7     103 ..     536     627 ..     531     639 .. 0.75
   3 ?    0.2   0.0      0.14   8.1e+02      22      79 ..     636     705 ..     634     722 .. 0.67

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.22
      AAA_22  44 fvtlpsst...sskdl.lrellralglelkaerlsseellealeqalrara 90 
                 +  l+++    + kd+ l +l  +l++ +++e+++++ l + l++++ + +
  EPX72702.1 214 ESRLNALRgllNEKDIeLAKLQGELDNIKHHEEKNRKKLERELQRQIVHVR 264
                 333333333334455555555555555555577777777777777776655 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00018
      AAA_22   7 ilvvtGesGtGKTtllrrlleqldeeakaeeerpevv..fvtlpsstsskdl.lrellralglelkaerlsseellealeqalraravielliiDEaqh 102
                 +++ +G++G+GK++++       ++        ++++  +v+l +++++      ++l++++++  +  l+++ l+++  + +++  + +  i+D++  
  EPX72702.1 536 SIFAYGQTGSGKSYTMLSNDGMVTR-------AVKQIfeYVELLKEKGWNYKlQGQFLEIYNERIYD-LLDKQGLMQQQKHDIHHDERERRTIVDNVRV 626
                 57789**********9987777653.......45555689999999977654288999999998888.********55555555555548899998755 PP

      AAA_22 103 l 103
                 +
  EPX72702.1 627 I 627
                 5 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.14
      AAA_22  22 lrrlleqldeeakaee.........erpevvfvtlpsstsskdllrellralglelka....erlsseell 79 
                 +++l + ++++  a++         + + +++++  +++  k+++r  l+ ++l +++    + ++ e+l+
  EPX72702.1 636 YKMLGKAAENRFIAATkanerssrsHTVFTLYIDGWNES-MKQICRGTLNLVDLAGSErlsfSQAEGERLR 705
                 566666666665555566677754455555588888887.*******999999988886666444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (804 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2322  (0.129511); expected 358.6 (0.02)
Passed bias filter:                      469  (0.0261587); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.95u 0.31s 00:00:01.26 Elapsed: 00:00:00.49
# Mc/sec: 4965.49
//
Query:       EPX72703.1  [L=115]
Description: prefoldin subunit 6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.8e-22   79.3   9.3      2e-22   79.1   9.3    1.0  1  Prefoldin_2      Prefoldin subunit
     0.0016   17.8   2.7     0.0026   17.1   2.7    1.5  1  Rh5              Rh5 coiled-coil domain
     0.0035   17.2   6.2      0.064   13.1   0.9    2.1  2  Bacillus_HBL     Bacillus haemolytic enterotoxin (HBL)
     0.0043   17.7   2.1     0.0065   17.2   1.0    1.7  2  Occludin_ELL     Occludin homology domain
     0.0063   16.5   1.9      0.011   15.7   1.8    1.6  1  DUF1732          Domain of unknown function (DUF1732)
  ------ inclusion threshold ------
      0.011   15.7   7.0      0.056   13.4   1.8    2.3  2  Prefoldin        Prefoldin subunit
      0.015   14.9   3.9       0.28   10.8   0.4    2.0  2  PI3K_P85_iSH2    Phosphatidylinositol 3-kinase regulatory sub
      0.023   15.6   3.5      0.047   14.6   3.3    1.8  1  ERp29            Endoplasmic reticulum protein ERp29, C-termi
      0.025   13.5   8.3       0.06   12.2   8.3    1.6  1  DUF812           Protein of unknown function (DUF812)
      0.035   14.2   1.7       0.07   13.3   1.7    1.5  1  Cob_adeno_trans  Cobalamin adenosyltransferase
      0.048   14.0   7.1       0.28   11.6   7.1    2.0  1  Uso1_p115_C      Uso1 / p115 like vesicle tethering protein, 
      0.049   13.6   5.8       0.13   12.2   1.3    2.1  2  Sec2p            GDP/GTP exchange factor Sec2p
      0.051   13.7   2.1      0.074   13.1   0.7    1.8  2  TLE_N            Groucho/TLE N-terminal Q-rich domain
      0.059   13.9   6.3       0.27   11.8   6.3    1.8  1  APG6_N           Apg6 coiled-coil region
        0.1   11.4   7.1       0.26   10.0   2.8    2.0  2  Tektin           Tektin family
       0.11   12.7   3.6       0.88    9.8   0.2    2.7  2  WXG100           Proteins of 100 residues with WXG
       0.12   11.0   4.7       0.13   10.9   4.7    1.0  1  Peptidase_S46    Peptidase S46
       0.14   11.1   9.0       0.23   10.4   6.9    1.8  2  IFT57            Intra-flagellar transport protein 57
       0.17   11.2   8.6       0.19   11.1   3.4    1.8  1  DUF4407          Domain of unknown function (DUF4407)
       0.19   10.6   8.2       0.41    9.5   8.2    1.5  1  Spc7             Spc7 kinetochore protein
        0.2   11.7   4.3       0.99    9.5   4.0    2.1  1  Prefoldin_3      Prefoldin subunit
       0.26   11.3   8.5       0.38   10.8   3.3    2.0  2  ADIP             Afadin- and alpha -actinin-Binding
       0.34   11.2   6.7        5.1    7.4   1.5    2.1  2  Spc24            Spc24 subunit of Ndc80
       0.46   10.7   3.7        0.5   10.6   0.4    2.5  3  DUF5446          Family of unknown function (DUF5446)
       0.51   10.5   6.3        3.9    7.6   5.8    1.9  1  Fib_alpha        Fibrinogen alpha/beta chain family
       0.61   10.4   8.0        2.4    8.4   1.9    2.2  2  THOC7            Tho complex subunit 7
        1.3    9.1   5.4       0.95    9.5   0.8    2.1  2  DUF2205          Short coiled-coil protein
        1.3    9.4  10.1        6.4    7.2   0.6    2.2  2  DUF4200          Domain of unknown function (DUF4200)
        3.2    8.4   8.6         35    5.1   6.4    2.1  2  HIP1_clath_bdg   Clathrin-binding domain of Huntingtin-intera


Domain annotation for each model (and alignments):
>> Prefoldin_2  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.1   9.3   3.3e-25     2e-22       3     104 ..       4     105 ..       2     107 .. 0.96

  Alignments for each domain:
  == domain 1  score: 79.1 bits;  conditional E-value: 3.3e-25
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-TT--EEEEETTEEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Prefoldin_2   3 linkfqqlqqqlqqlaqqikqletqlkelelvleelelldedtkvyklvGdvlvkqdkeevkeeLeerketlekeiktlekqleklekeleelkeelq 100
                  l+ ++q+ q++l+ ++  ik+le+ql+e+ +v +ele +d d ++yk++G++lvkq++ee+k+++++r+++++kei+++e+q+e  + e+++lk+ + 
   EPX72703.1   4 LARNYQEKQSELTGFVDSIKKLEAQLQENTTVYNELERIDGDSNIYKQIGPTLVKQTQEEAKTNVQTRLDFIKKEIARVENQIEGSKVEFAKLKSAIV 101
                  6789*******************************************************************************************998 PP

                  CCTS CS
  Prefoldin_2 101 kklq 104
                  +++ 
   EPX72703.1 102 QAQT 105
                  8765 PP

>> Rh5  Rh5 coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   2.7   4.1e-06    0.0026     120     190 ..      38     108 ..       1     114 [. 0.84

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 4.1e-06
         Rh5 120 knsainkdkeilksikslinilkkelesknlidklkFlkkeiedIinkynkhlkkikkaeslikkitkedk 190
                   + i+ d +i+k+i   + +  +e+++ n+ + l+F+kkei  + n+++    +  k +s i + + e+ 
  EPX72703.1  38 ELERIDGDSNIYKQIGPTLVKQTQEEAKTNVQTRLDFIKKEIARVENQIEGSKVEFAKLKSAIVQAQTEAA 108
                 4468999***********99*****************************9998888888877777666654 PP

>> Bacillus_HBL  Bacillus haemolytic enterotoxin (HBL)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.1   0.8    0.0069       4.3     108     142 ..       2      36 ..       1      51 [. 0.89
   2 !   13.1   0.9    0.0001     0.064      47      94 ..      56     103 ..      38     114 .. 0.57

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0069
  Bacillus_HBL 108 ekLqeeiqqnqkevkqlikeLkklklklakdsknF 142
                   e+L ++ q++q e +  +  +kkl+ +l+++++ +
    EPX72703.1   2 EDLARNYQEKQSELTGFVDSIKKLEAQLQENTTVY 36 
                   79999************************999866 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 0.0001
  Bacillus_HBL  47 klnqhqklakanakewlnevkPqliktiqdiigYstkFqsyyktlvea 94 
                    ++q q+ ak+n+++ l+ +k+++    ++i g + +F++ ++ +v+a
    EPX72703.1  56 LVKQTQEEAKTNVQTRLDFIKKEIARVENQIEGSKVEFAKLKSAIVQA 103
                   234556666666666666666666666666666666666666666654 PP

>> Occludin_ELL  Occludin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   1.0     1e-05    0.0065      23      98 ..       7      81 ..       2      84 .. 0.94
   2 ?    0.7   0.0       1.5     9e+02      26      51 ..      81     106 ..      77     114 .. 0.67

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 1e-05
  Occludin_ELL 23 eYkelhaeleevskkfseLerelkelkegskeykkieeeilqeykklkkdpeyqekkkrceyLkekLshiKklike 98
                  +Y+e ++el+ + + +++Le++l+e ++  +e ++i  +  + yk++  +   q++++  +  + +L+ iKk i+ 
    EPX72703.1  7 NYQEKQSELTGFVDSIKKLEAQLQENTTVYNELERIDGD-SNIYKQIGPTLVKQTQEEAKTNVQTRLDFIKKEIAR 81
                  7**************************************.*******9999999999999************9976 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 1.5
  Occludin_ELL  26 elhaeleevskkfseLerelkelkeg 51 
                   ++++++e  + +f++L++ + +++++
    EPX72703.1  81 RVENQIEGSKVEFAKLKSAIVQAQTE 106
                   55667777777888888777666554 PP

>> DUF1732  Domain of unknown function (DUF1732)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   1.8   1.8e-05     0.011      29      73 ..      55     106 ..      14     110 .. 0.72

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1.8e-05
     DUF1732  29 lleeee......svGrkLdFllQElnReanTi.gskandleitklvvelKse 73 
                 +l +++      +v  +LdF+ +E+ R  n i gsk++ +++++++v++++e
  EPX72703.1  55 TLVKQTqeeaktNVQTRLDFIKKEIARVENQIeGSKVEFAKLKSAIVQAQTE 106
                 3322223445558999***********9999978*************99876 PP

>> Prefoldin  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.7     0.036        22       3      34 ..      13      44 ..       8      71 .. 0.77
   2 ?   13.4   1.8   9.1e-05     0.056      79     119 ..      72     112 ..      56     113 .. 0.92

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.036
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT CS
   Prefoldin  3 eeleslqaelaqlkeaieelektletlktlkk 34
                +el+ + +++++l++++ e++++ + l++++ 
  EPX72703.1 13 SELTGFVDSIKKLEAQLQENTTVYNELERIDG 44
                56666778888888888888888888888776 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 9.1e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Prefoldin  79 iellkkkleelekqlekleeeleklkdqittleanlaqlyq 119
                  +++kk+++ +e+q+e  + e +klk++i +++ ++a +++
  EPX72703.1  72 LDFIKKEIARVENQIEGSKVEFAKLKSAIVQAQTEAASKAN 112
                 589*********************************99987 PP

>> PI3K_P85_iSH2  Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.4   0.00045      0.28      84     123 ..       2      41 ..       1      43 [. 0.95
   2 ?    5.7   0.2     0.017        10      87     124 ..      62      99 ..      46     109 .. 0.61

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00045
  PI3K_P85_iSH2  84 eklqenleqlksrlkelhsskekLeedlkqqkeeereleR 123
                    e+l  n+++ +s l  + +s +kLe +l+++++ + eleR
     EPX72703.1   2 EDLARNYQEKQSELTGFVDSIKKLEAQLQENTTVYNELER 41 
                    67899**********************************9 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.017
  PI3K_P85_iSH2  87 qenleqlksrlkelhsskekLeedlkqqkeeereleRe 124
                    +e   +++ rl+ ++++ +++e++++  k e  +l   
     EPX72703.1  62 EEAKTNVQTRLDFIKKEIARVENQIEGSKVEFAKLKSA 99 
                    33444555666666666666666666555555555544 PP

>> ERp29  Endoplasmic reticulum protein ERp29, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   3.3   7.7e-05     0.047       8      86 ..       3      99 ..       1     105 [. 0.72

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 7.7e-05
       ERp29  8 elaaefvaaakaereelleeakkaaeklk........sekekkaaeyYvkvmekiaekge...........eyvekElkRLekllkkgklaaekkdel 86
                +la+++ +++ +e +  ++++kk+ ++l+         e+ +   ++Y ++   ++++ +           ++++kE++R+e+ ++ +k++ +k+++ 
  EPX72703.1  3 DLARNYQEKQ-SELTGFVDSIKKLEAQLQenttvyneLERIDGDSNIYKQIGPTLVKQTQeeaktnvqtrlDFIKKEIARVENQIEGSKVEFAKLKSA 99
                5666666555.666666666666666666666777664455666777777776666666666679999*****************9999998888765 PP

>> DUF812  Protein of unknown function (DUF812)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   8.3   9.6e-05      0.06     273     370 ..      10     110 ..       2     115 .] 0.70

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 9.6e-05
      DUF812 273 ksksdlaellsefseksetdslktkgsrfthaekl...qftke.....elakkaeteeelkkkreeeleelqeqieeleskieeleeeikklessikqv 363
                 +++s+l  +++++  k+ + +l+++ + +++ e++   +   +      ++  ++t+ee+k++ ++ l+ ++++i ++e++ie  + e +kl+s i q+
  EPX72703.1  10 EKQSELTGFVDSI--KKLEAQLQENTTVYNELERIdgdS---NiykqiGPTLVKQTQEEAKTNVQTRLDFIKKEIARVENQIEGSKVEFAKLKSAIVQA 103
                 4555666666666..233333344444444445553330...1333334448899*******************************************9 PP

      DUF812 364 eeeleee 370
                 + e+  +
  EPX72703.1 104 QTEAASK 110
                 9988765 PP

>> Cob_adeno_trans  Cobalamin adenosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   1.7   0.00011      0.07      39     121 ..      29     112 ..       1     114 [. 0.62

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 0.00011
                      HHHHHHHCTTTTHHHHHHHHHHHHH...HHHHHHHHHT.......-BTCCG-S--HHHHHHHHHHHHHHHHHS--EESEEES-SSHHHHHHH CS
  Cob_adeno_trans  39 iglarallaeeeeelkeaLeeiqne...Lfdlgaelatp......ekkkekkkiteeeveelekeideleaelpplksfilpggspaaaalh 121
                      +          ++++ ++Le+i  +     ++g +l  +      ++ +++ ++ ++e++++e++i+  + e+ +lks i++ +++aa++++
       EPX72703.1  29 LQE--------NTTVYNELERIDGDsniYKQIGPTLVKQtqeeakTNVQTRLDFIKKEIARVENQIEGSKVEFAKLKSAIVQAQTEAASKAN 112
                      222........34555566665544222334444444334444333444455555667999******9999999*************99876 PP

>> Uso1_p115_C  Uso1 / p115 like vesicle tethering protein, C terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   7.1   0.00045      0.28       4      68 ..       9      93 ..       6     115 .] 0.67

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00045
  Uso1_p115_C  4 seleseaaslkdeneklkaelqslskalesleqk....................eakkaaesqakeleaenkklekeleklrael 68
                 +e +se + + d  +kl+a+lq+ ++ +++le+                     eak + +++ + +++e+ ++e+++e  + e 
   EPX72703.1  9 QEKQSELTGFVDSIKKLEAQLQENTTVYNELERIdgdsniykqigptlvkqtqeEAKTNVQTRLDFIKKEIARVENQIEGSKVEF 93
                 67899999999**********************9999999555555555544444444444444444455555555444444444 PP

>> Sec2p  GDP/GTP exchange factor Sec2p
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.2     0.085        53      56      82 ..      12      38 ..       2      47 .. 0.56
   2 ?   12.2   1.3   0.00021      0.13      40      90 ..      59     110 ..      54     112 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.085
                HHHHTTHCHCCCHCTSSSSHHHHCTTT CS
       Sec2p 56 keqLkeketlleslqeqLkeLkevlek 82
                +++L+     +++l++qL+e  +v ++
  EPX72703.1 12 QSELTGFVDSIKKLEAQLQENTTVYNE 38
                445555555555555555554444444 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 0.00021
                 HHH.HHHHHHHHHHHHHHHHHTTHCHCCCHCTSSSSHHHHCTTTXXXXXXXX CS
       Sec2p  40 aar.kekealekkneklkeqLkeketlleslqeqLkeLkevlekmeeeseeq 90 
                 + + + k +++++ + +k++++  e+++e ++ + ++Lk+++ + ++e  ++
  EPX72703.1  59 QTQeEAKTNVQTRLDFIKKEIARVENQIEGSKVEFAKLKSAIVQAQTEAASK 110
                 544266889**********************************999987765 PP

>> TLE_N  Groucho/TLE N-terminal Q-rich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       2.4   1.5e+03      97     115 ..      10      28 ..       4      45 .. 0.53
   2 ?   13.1   0.7   0.00012     0.074       9      54 ..      57     102 ..      48     107 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 2.4
       TLE_N  97 ehqqqvaqaverakqvtma 115
                 e+q++ ++ v+  k+  ++
  EPX72703.1  10 EKQSELTGFVDSIKKLEAQ 28 
                 4555555555544444333 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 0.00012
       TLE_N   9 aqsagqslkftvlescdrikeefqflqaqyhsLklecekLasekte 54 
                 +++++++ k  v+  +d ik+e+  +++q++  k+e+ kL s  ++
  EPX72703.1  57 VKQTQEEAKTNVQTRLDFIKKEIARVENQIEGSKVEFAKLKSAIVQ 102
                 5678999*********************************987655 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   6.3   0.00043      0.27      12      94 ..       2     110 ..       1     114 [. 0.77

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00043
      APG6_N  12 eeldkqleqaekerdaYeeflkklkkekkeeek..........................qdeeleeleeeleklekeeeelleeLkelekereeleael 84 
                 e l + +++ ++e   + +  kkl+++ +e+++                          q+e   + + +l+ ++ke ++ +++++  + e ++l++++
  EPX72703.1   2 EDLARNYQEKQSELTGFVDSIKKLEAQLQENTTvyneleridgdsniykqigptlvkqtQEEAKTNVQTRLDFIKKEIARVENQIEGSKVEFAKLKSAI 100
                 566677777777777777777888877555444777888888888888888888888877777788888899999999999999999999999999999 PP

      APG6_N  85 aaleeeleal 94 
                  +++ e++ +
  EPX72703.1 101 VQAQTEAASK 110
                 9998888765 PP

>> Tektin  Tektin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.1      0.03        18     325     352 ..      14      41 ..       6      51 .. 0.82
   2 ?   10.0   2.8   0.00043      0.26     255     301 ..      60     106 ..      55     113 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.03
      Tektin 325 EvkeleetieaLkeklaeaeaslkaLer 352
                 E++   ++i++L+++l+e ++ +++Ler
  EPX72703.1  14 ELTGFVDSIKKLEAQLQENTTVYNELER 41 
                 6666678889999999999999888886 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00043
      Tektin 255 etedaknkleeqlkkvleeiaeleknieeLekairdkeaplklaqtR 301
                   e+ak+++++ l+ +++eia++e++ie  + + ++ ++++  aqt 
  EPX72703.1  60 TQEEAKTNVQTRLDFIKKEIARVENQIEGSKVEFAKLKSAIVQAQTE 106
                 46799************************999999999999999995 PP

>> WXG100  Proteins of 100 residues with WXG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.2    0.0014      0.88       9      39 ..       1      31 [.       1      33 [. 0.94
   2 ?    3.1   0.4      0.18   1.1e+02      18      44 ..      63      89 ..      56     112 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.0014
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGC CS
      WXG100  9 lrqaaarfqkqaeeledelqrlkaevdalqs 39
                +++ a+++q++++el++ ++++k+  ++lq+
  EPX72703.1  1 MEDLARNYQEKQSELTGFVDSIKKLEAQLQE 31
                899**************************76 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.18
                HHHHHHHHHHHHHHHHHHHCGCGCTHH CS
      WXG100 18 kqaeeledelqrlkaevdalqsgWsGa 44
                +++++++++l+ +k+e++ ++++ +G+
  EPX72703.1 63 EAKTNVQTRLDFIKKEIARVENQIEGS 89
                566777777888888777777766664 PP

>> Peptidase_S46  Peptidase S46
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   4.7    0.0002      0.13     339     445 ..       5     110 ..       1     115 [] 0.86

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.0002
                    HHHCT-H.HHHTTHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSHHHHHHHHHHHHHHHHH....HH-HHHHHHHHHHHHHHCHHHHCS--HHHHHH CS
  Peptidase_S46 339 lkkdpekkekygkalselealvkekrklaersalleeaessgsellslarklvrlaeerekpdaereeeyqeralealekeleridkdldaevdka 434
                    +++ +ek++++   ++++++l ++ ++ ++ ++ le++   +  + ++  +lv+ ++e+ k + + + ++ +++++++e+++e + k   a++  a
     EPX72703.1   5 ARNYQEKQSELTGFVDSIKKLEAQLQENTTVYNELERIDGDSNIYKQIGPTLVKQTQEEAKTNVQTRLDFIKKEIARVENQIEGS-KVEFAKLKSA 99 
                    5566777889999***************************998999999**********************************99.5556778888 PP

                    HHHHHHHHHHH CS
  Peptidase_S46 435 vlaallkeyre 445
                    +++a+ +++ +
     EPX72703.1 100 IVQAQTEAASK 110
                    88877766655 PP

>> IFT57  Intra-flagellar transport protein 57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   6.9   0.00037      0.23     272     355 ..       1      86 [.       1      87 [. 0.86
   2 ?    5.6   2.0     0.011       6.7     244     294 ..      58     108 ..      45     115 .] 0.74

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00037
       IFT57 272 leellqeyreaqeelsevkekykqlsegvseltrelaeis..eelekvkqemeergssmtDgsplvkikkaltklkkEikqmdvri 355
                 +e+l ++y+e+q el+ + +++k+l+++++e t+ ++e++  +  +++ +++     + t  +  +++++ l+ +kkEi   + +i
  EPX72703.1   1 MEDLARNYQEKQSELTGFVDSIKKLEAQLQENTTVYNELEriDGDSNIYKQIGPTLVKQTQEEAKTNVQTRLDFIKKEIARVENQI 86 
                 58899***************************998887762234466778888899999999999**************9988777 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.011
       IFT57 244 ksqlkklhedisktlekiesrEkylnsqleellqeyreaqeelsevkekyk 294
                 k+  ++ +++++  l+ i++   ++++q+e +  e+ +++  + +++ +  
  EPX72703.1  58 KQTQEEAKTNVQTRLDFIKKEIARVENQIEGSKVEFAKLKSAIVQAQTEAA 108
                 555667778888888888888888888888888888888888888776654 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   3.4    0.0003      0.19     107     168 ..      51     112 ..      48     115 .] 0.85

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.0003
     DUF4407 107 eIdaelaeeqqeeakelkeqlaaaltaelaeleaqiaalqaeidaaearldalraeaqkeld 168
                  I  +l ++ qeeak++ ++  +  ++e+a+ e+qi+  + e++++++++ ++++ea+++++
  EPX72703.1  51 QIGPTLVKQTQEEAKTNVQTRLDFIKKEIARVENQIEGSKVEFAKLKSAIVQAQTEAASKAN 112
                 567778888888988886666666*******************************9998765 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   8.2   0.00066      0.41     152     252 ..       9     109 ..       1     114 [. 0.62

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00066
        Spc7 152 eedkelLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelae.lkaeieekkkelaelqeqleeleekieelkeqkseleee 249
                 +e +++L+   + +++l  +l+e+ +++ +ele++   ++  ++i ++ +++++ee ++ +++ ++  kke+a++++q+e ++ ++++lk+ + ++++e
  EPX72703.1   9 QEKQSELTGFVDSIKKLEAQLQEN-TTVYNELERIDGDSNIYKQIGPTLVKQTQEEAKTnVQTRLDFIKKEIARVENQIEGSKVEFAKLKSAIVQAQTE 106
                 334444444444444444444433.34455555555577777888888888888876541577788888888888888888888888888888777777 PP

        Spc7 250 iae 252
                  a+
  EPX72703.1 107 AAS 109
                 654 PP

>> Prefoldin_3  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   4.0    0.0016      0.99       6      93 ..       7      88 ..       2      96 .. 0.63

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0016
  Prefoldin_3  6 klreweaeydglkeeisalkeeddateedllriardfegslvtekEveeilGekqgvtrskqQvvdlisrRiDYVkqniktlekrlea 93
                 +++e+++e++g+ + i++l++    + ++  ++ +++e     +  + + +G +  v+++++     ++ R+D++k+ i+ +e ++e 
   EPX72703.1  7 NYQEKQSELTGFVDSIKKLEA----QLQENTTVYNELERID-GDSNIYKQIGPT-LVKQTQEEAKTNVQTRLDFIKKEIARVENQIEG 88
                 566666666666666666644....2222233333333211.123444445553.45788888889999****************986 PP

>> ADIP  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.4     0.097        60      57      86 ..       3      32 ..       1      41 [. 0.64
   2 ?   10.8   3.3   0.00061      0.38      83     133 ..      57     108 ..      37     112 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.097
        ADIP 57 slnetirkleaeierlqskierlktqleql 86
                 l++  +++++e++    +i++l++ql++ 
  EPX72703.1  3 DLARNYQEKQSELTGFVDSIKKLEAQLQEN 32
                456666677777777777777777777654 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00061
        ADIP  83 leqlerela.lvqakerqlekklktleqklknekeelqrlknalqqiktqya 133
                 ++q++ e++  vq ++  ++k++++ e+++ + k e+++lk+a+ q +t +a
  EPX72703.1  57 VKQTQEEAKtNVQTRLDFIKKEIARVENQIEGSKVEFAKLKSAIVQAQTEAA 108
                 68888998889999********************************999876 PP

>> Spc24  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   1.5    0.0082       5.1      15      56 ..       3      50 ..       1      73 [. 0.57
   2 ?    6.8   1.0     0.012       7.6       9      43 ..      75     109 ..      60     115 .] 0.52

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0082
       Spc24 15 dleselesleselaelkeeleeleeesee.....keserve.detllk 56
                dl ++ ++ +sel+   + +++le + +e     +e er + d++++k
  EPX72703.1  3 DLARNYQEKQSELTGFVDSIKKLEAQLQEnttvyNELERIDgDSNIYK 50
                555666666666666666666666666663222222333444554443 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.012
       Spc24   9 iakelsdleselesleselaelkeeleeleeesee 43 
                 i ke+  +e+++e  + e a+lk+ + + ++e  +
  EPX72703.1  75 IKKEIARVENQIEGSKVEFAKLKSAIVQAQTEAAS 109
                 44555555555555555555555555555554443 PP

>> DUF5446  Family of unknown function (DUF5446)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.1      0.99   6.1e+02      35      57 ..       7      32 ..       2      46 .. 0.52
   2 ?   10.6   0.4    0.0008       0.5      31      64 ..      56      86 ..      33      94 .. 0.80
   3 ?   -0.9   0.1         3   1.8e+03      27      45 ..      95     113 ..      82     114 .. 0.71

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.99
     DUF5446 35 teaekeekeeerld...llekElkdL 57
                + +ek+++    +d   +le  l++ 
  EPX72703.1  7 NYQEKQSELTGFVDsikKLEAQLQEN 32
                55666666554444000445555554 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.0008
     DUF5446 31 avneteaekeekeeerldllekElkdLvlCigkl 64
                 v++t+ e++ + + rld + kE++     ++++
  EPX72703.1 56 LVKQTQEEAKTNVQTRLDFIKKEIAR---VENQI 86
                488999999***************97...45555 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 3
     DUF5446  27 elseavneteaekeekeee 45 
                 +l +a+ + + e+ +k ++
  EPX72703.1  95 KLKSAIVQAQTEAASKANA 113
                 5888888888888888775 PP

>> Fib_alpha  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   5.8    0.0064       3.9      33     111 ..      18     100 ..       1     106 [. 0.48

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0064
                 CCHHHCCCCCCCCCCCCHHHHHHHHH..HHHHHHHHHHHHHHHHH..HHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHH CS
   Fib_alpha  33 vkkdlekleneleeisnstkeaeelv..keikdslrekqkskkdn..dnvikksskeleeeilrlketidaqesnirvLqnvl 111
                 + ++++kle +l+e++  ++e e++   ++i++++ ++  +++++  ++ ++   + +++ei+r++++i     +  +L++ +
  EPX72703.1  18 FVDSIKKLEAQLQENTTVYNELERIDgdSNIYKQIGPTLVKQTQEeaKTNVQTRLDFIKKEIARVENQIEGSKVEFAKLKSAI 100
                 44566777777777666666666543113444444444433332212333333334444555555555555555555555443 PP

>> THOC7  Tho complex subunit 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   1.3      0.04        25      71     107 ..       2      38 ..       1      63 [. 0.82
   2 ?    8.4   1.9    0.0039       2.4      71     108 ..      73     110 ..      54     113 .. 0.72

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.04
       THOC7  71 eryeaekeeieseieavreeieelkaqLeearatran 107
                 e ++++++e +se+    ++i++l+aqL+e  ++++ 
  EPX72703.1   2 EDLARNYQEKQSELTGFVDSIKKLEAQLQENTTVYNE 38 
                 5667788888889999999999999999998887765 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.0039
       THOC7  71 eryeaekeeieseieavreeieelkaqLeearatranr 108
                 + +++e +++e++ie  + e ++lk+ + +a+++ a++
  EPX72703.1  73 DFIKKEIARVENQIEGSKVEFAKLKSAIVQAQTEAASK 110
                 33566778888999999999999999999999998887 PP

>> DUF2205  Short coiled-coil protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.3      0.33     2e+02      10      51 ..       4      31 ..       1      51 [. 0.56
   2 ?    9.5   0.8    0.0015      0.95      10      51 ..      57      98 ..      50     100 .. 0.94

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.33
     DUF2205 10 veklerearerLqqqakeLqssLqaLaervdeVkeehdKLes 51
                + +  +e++ +L                 vd++k+ + +L+ 
  EPX72703.1  4 LARNYQEKQSELT--------------GFVDSIKKLEAQLQE 31
                4444455555554..............444444444444443 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.0015
     DUF2205 10 veklerearerLqqqakeLqssLqaLaervdeVkeehdKLes 51
                v++ ++ea++++q++ + +++    + ++++  k e  KL+s
  EPX72703.1 57 VKQTQEEAKTNVQTRLDFIKKEIARVENQIEGSKVEFAKLKS 98
                78999***********************************98 PP

>> DUF4200  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.6      0.01       6.4      70     107 ..       3      40 ..       1      52 [. 0.82
   2 ?    6.8   3.4     0.014       8.8      22      69 ..      65     112 ..      55     115 .] 0.62

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.01
     DUF4200  70 eerklkkekeaeikklkaeietlkseiekleekleeyk 107
                 + +++ +ek++e+  + ++i++l+++++++   ++e++
  EPX72703.1   3 DLARNYQEKQSELTGFVDSIKKLEAQLQENTTVYNELE 40 
                 56788899999999999999999999999988888776 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.014
     DUF4200  22 iqrleealkqreeelekkeqeleedllkfdkflkendakraralkkae 69 
                   + + +l+  ++e+ + e+++e + ++f k    + + +++a  ka+
  EPX72703.1  65 KTNVQTRLDFIKKEIARVENQIEGSKVEFAKLKSAIVQAQTEAASKAN 112
                 223455566666777777777777777777777777777777777765 PP

>> HIP1_clath_bdg  Clathrin-binding domain of Huntingtin-interacting protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.5      0.13        78      54      92 ..       1      39 [.       1      46 [. 0.60
   2 ?    5.1   6.4     0.057        35      19      68 ..      58     107 ..      19     114 .. 0.53

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.13
  HIP1_clath_bdg 54 lekLkreleakraelarlkssLesseqsgeqlssqlaaL 92
                    +e L r+ ++k+ el+ +  s+++ e + ++ ++  ++L
      EPX72703.1  1 MEDLARNYQEKQSELTGFVDSIKKLEAQLQENTTVYNEL 39
                    466667777777777766666666655555555544444 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.057
  HIP1_clath_bdg  19 rqaqeeverekkeleeelerlkee...aerkleeqkeelekLkreleakrael 68 
                     +q+qee    k +++++l+ +k+e    e+++e  k e  kLk+ + + ++e 
      EPX72703.1  58 KQTQEEA---KTNVQTRLDFIKKEiarVENQIEGSKVEFAKLKSAIVQAQTEA 107
                     3333332...3333333333333311123333344444444444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1652  (0.0921412); expected 358.6 (0.02)
Passed bias filter:                      572  (0.0319036); expected 358.6 (0.02)
Passed Vit filter:                        91  (0.00507558); expected 17.9 (0.001)
Passed Fwd filter:                        29  (0.00161749); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              29  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.44
# Mc/sec: 779.88
//
Query:       EPX72704.1  [L=343]
Description: U5 snRNP-associated protein Aar2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.8e-35  123.0   7.4    1.8e-33  116.4   7.4    2.8  1  AAR2          AAR2 protein
  ------ inclusion threshold ------
       0.13   12.0   0.0       0.24   11.2   0.0    1.3  1  7TM_GPCR_Srb  Serpentine type 7TM GPCR chemoreceptor Srb


Domain annotation for each model (and alignments):
>> AAR2  AAR2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.4   7.4     2e-37   1.8e-33       9     338 ..       7     301 ..       5     309 .. 0.83

  Alignments for each domain:
  == domain 1  score: 116.4 bits;  conditional E-value: 2e-37
        AAR2   9 dlpegtefGiDlksftvgpkFkGikmiPpGvHfvyysaasstselslrsgfffyfkkgevivkkwdkeeEdLveelseeeaerykanlksiefdkkLap 107
                 + p    +GiD  ++ ++  ++G+k++  G+H++++++   ++ + l sg+ffy++k+  +  ++d+ +E+ +            +++    +d k  +
  EPX72704.1   7 NWPDTYHIGIDGCFYPSKR-LHGVKNLVFGLHLITWTP---SNGVGLVSGAFFYISKPCAYTLRYDTWSENALL-----------EEVD-CVYDDKFYN 89 
                 6688899******999876.******************...999***********************9997666...........2332.234555656 PP

        AAR2 108 YpsdasekWksltshIteellerilpesgkisstaelasseseaesekkkawskssseeskgssakrdeeelpslkskegtelrFteiplkrtwpegat 206
                 Y s   ekW++l ++I+++ l+ri   +g i  ++++                    +  ++  + ++ +  + +  +++t l+Ft+++ k++w + ++
  EPX72704.1  90 YTSA--EKWNDLVKFIQKKDLQRIFQTEGPIFLVDTS--------------------TYANTDLKPNELQLFQPS--EKETVLQFTNFDVKKSWSPTSV 164
                 6555..57******************66666544444....................233333444444444333..3445678*************** PP

        AAR2 207 grelTkaalDkSwaLedllrksssgdeaelLgElqfaFvlflllqnyssfeqWkrllsLlltceeaikerpdlfvkflrvLraqLkelpe..flsdivs 303
                 g+e++ +a+DkS + + l+++ ++g+ ++ L+E+ fa+++  ++++y ++ +Wk+ll++ll++ ++ + +pd++ +fl ++ +q++ l e  + ++++s
  EPX72704.1 165 GSERSLQAIDKSFMYRRLVQSAWHGELDSALAEYSFAYLAYAFVSHYAALSHWKKLLEVLLQSYTLAELEPDYYSTFLGLFCVQIETLHErdIETSTLS 263
                 *****************************************************************************************9877777999 PP

        AAR2 304 kdnfLkkllkkfrenlee...eeeeeeeesklkkelek 338
                 ++nf+++ll+++ e+ ++   + +++++ ++l++++ +
  EPX72704.1 264 EKNFMQSLLENLLERKSDgnfPIQVNNALNQLVNTVSD 301
                 ******************66644555556666655544 PP

>> 7TM_GPCR_Srb  Serpentine type 7TM GPCR chemoreceptor Srb
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   2.6e-05      0.24      26      61 ..     177     212 ..     172     227 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 2.6e-05
  7TM_GPCR_Srb  26 flfkklfklsfhGnlktlliayfisvllfavilcfv 61 
                   f++++l+++++hG+l   l  y  + l++a +  ++
    EPX72704.1 177 FMYRRLVQSAWHGELDSALAEYSFAYLAYAFVSHYA 212
                   9****************************9876655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       495  (0.0276089); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 2352.69
//
Query:       EPX72705.1  [L=139]
Description: 40S ribosomal protein S14 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.9e-47  158.6   2.9    7.1e-47  158.4   2.9    1.1  1  Ribosomal_S11  Ribosomal protein S11
  ------ inclusion threshold ------
      0.064   13.5   0.1       0.12   12.6   0.1    1.5  1  CBM_25         Carbohydrate binding domain (family 25)


Domain annotation for each model (and alignments):
>> Ribosomal_S11  Ribosomal protein S11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.4   2.9   7.9e-51   7.1e-47       1     110 []      17     135 ..      17     135 .. 0.99

  Alignments for each domain:
  == domain 1  score: 158.4 bits;  conditional E-value: 7.9e-51
  Ribosomal_S11   1 GvahiqasfnntiititdlkGaevlvksaGglgvkasr.kssPyaaqlaaekaaekvldkGikavevkvkg........pGpGreaalralaraGl 87 
                    Gvahi+asfn+t+++itdl+G+e++++ +Gg++vk++r +ssPyaa+laa++aa k+++ Gi+a+++k+++        pGpG++aalralaraG+
     EPX72705.1  17 GVAHIFASFNDTFVHITDLTGKETITRVTGGMKVKTDRdESSPYAAMLAAQDAAVKCKEVGITALHIKIRAtggtatktPGPGAQAALRALARAGM 112
                    9*********************************************************************************************** PP

  Ribosomal_S11  88 kigriedvtPiPhdgirrpkkrr 110
                    +igriedvtP+P+d++rr+++rr
     EPX72705.1 113 RIGRIEDVTPVPTDSTRRKGGRR 135
                    ********************998 PP

>> CBM_25  Carbohydrate binding domain (family 25)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   1.4e-05      0.12      13      58 ..      74     119 ..      66     129 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.4e-05
      CBM_25  13 rkkGftsayihyrpaGGswtavpGvkmrdaeaGyakkdvdlGaass 58 
                 ++ G t+ +i+ r +GG+ t +pG + ++a    a+  + +G   +
  EPX72705.1  74 KEVGITALHIKIRATGGTATKTPGPGAQAALRALARAGMRIGRIED 119
                 67899*************************9999999888887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       331  (0.0184617); expected 358.6 (0.02)
Passed bias filter:                      250  (0.0139439); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 1031.89
//
Query:       EPX72706.1  [L=1406]
Description: DNA polymerase alpha catalytic subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   2.6e-121  405.5   0.8   3.9e-121  405.0   0.8    1.3  1  DNA_pol_B        DNA polymerase family B
    4.8e-47  160.7   0.1    8.6e-47  159.9   0.1    1.4  1  DNA_pol_B_exo1   DNA polymerase family B, exonuclease domain
    1.3e-34  119.6   8.0    1.6e-33  116.0   8.0    2.3  1  zf-DNA_Pol       DNA Polymerase alpha zinc finger
    2.1e-22   79.0  13.7    7.5e-22   77.2  10.0    3.0  2  DNA_pol_alpha_N  DNA polymerase alpha subunit p180 N terminal
     0.0082   15.1   0.0      0.018   13.9   0.0    1.5  1  DNA_pol_B_2      DNA polymerase type B, organellar and viral
  ------ inclusion threshold ------
      0.064   13.0   0.7       0.17   11.7   0.7    1.6  1  CAP_assoc_N      CAP-associated N-terminal
        5.1    7.1   8.5         11    6.0   8.5    1.5  1  YL1              YL1 nuclear protein


Domain annotation for each model (and alignments):
>> DNA_pol_B  DNA polymerase family B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  405.0   0.8  1.5e-124  3.9e-121       2     459 .]     765    1204 ..     764    1204 .. 0.93

  Alignments for each domain:
  == domain 1  score: 405.0 bits;  conditional E-value: 1.5e-124
                  -HHHHHHS-HHHHHHHHHHHHHHHTTBE-B-...................----.--SS.-S----BE----EEESS-EEEEEETTHHHHHHHHTT- CS
   DNA_pol_B    2 plsrvledgqqirveslLlrlakeegfilpd...................rtekkgkeeegYqGatVlePkkglydkpvlvlDFaSLYPsiiqahNl 79  
                   ++r+l++++++r+e++Ll+++k++g+i+pd                   ++e+ gk++++Y+G++V+eP+kglyd+++lv+DF+SLYPsiiq++N+
  EPX72706.1  765 SWARTLAGTRAERNEFILLHEFKKNGYIVPDkqyntkrnvdildledsefQEETPGKKKDKYKGGLVFEPQKGLYDTCILVMDFNSLYPSIIQEYNI 861 
                  6899***************************888888888888888888867777777768************************************ PP

                  STTTCE-HCCHCCT--BTT...TEEE-TCC-EEE-TTS---HHHHHHHHHHHHHHHHHHHHH.CS--HHHHHHHHHHHHHHHHHHHHHHHHHTSTTS CS
   DNA_pol_B   80 cyttlvaseeeakeleaedeyleveveprlvefvkksvregllpklLkdllakRkaikkelk.eekdefekalldkqQlalKvtaNsvYGftGvans 175 
                  c+tt+++s ++++    ed   ++       ++ ++s+++g++p+l+++l+++R+ ik  lk ++ ++++  ++d+qQ+alK+taNs+YG++G+++s
  EPX72706.1  862 CFTTVQRSSSTKDG---ED---HI------PNVPTASSEQGIFPRLIANLVDRRRLIKGLLKdKSATPTQLLQWDIQQQALKLTANSMYGCLGYTKS 946 
                  ******99998663...22...22......33445889************************8888999**************************** PP

                  TT--HHHHHHHHHHHHHHHHHHHHHHHHT...SSGGGT-SS.....T-EEEEEBSSEEEEE-S-SSHHHHHHHHHHHHHHHHT.TSTTT--EEEEEE CS
   DNA_pol_B  176 rlpclalAasvTtiGRemLektkelvekkaellskllalpeeaeeeklkviYGDTDSvfielkvkdveellkigkelaeevseklfkkplklefekv 272 
                  r+++ +lA ++T++GRe+L++t+el +++                 +l+viYGDTDSv+++++v+d +++l ig+e++e+v+e +++k l++++++v
  EPX72706.1  947 RFYARPLAVLITYKGREALMNTRELADAM-----------------GLQVIYGDTDSVMLNTNVTDKQQALVIGNEFKEKVNE-RYRK-LEIDIDNV 1024
                  ***************************99.................9************************************.9999.******** PP

                  EEEEEEEETTEEEEEEEEESSTTSE.EEEESSGGGSTTS-HHHHHHHHHHHHHHSSS....S-HHHHHHHHHHHHHHHHHHHHTT-S-GGGG-EEEE CS
   DNA_pol_B  273 ykkllLisKKkYaglkvektskank.lliKGvdlvRrdncklvkevikkvlelllkdeteersleeglealksilkdvleeleenkvplekfvlske 368 
                  y+++lL++KKkYa+l+v+  ++ n+ l++KG+d+ Rr+ c l+ke +k +l+++l+     ++ e+++ +++++l+++ ++++++k+  +kf++ ++
  EPX72706.1 1025 YQRMLLHAKKKYAALQVD--DQGNSvLDVKGLDMKRREYCILAKEASKYCLDQILSG----ERSETVVSNIHNYLSEFADQMKNGKFTANKFIIFNR 1115
                  ******************..5555449******************************....9*********************************** PP

                  ESS.CCCS.SGCCSHHHHHHHHHHHHCSS---TTCEEEEEEBETSS.....SS-GGGTEEEH.HHHHH.CCSEB-HHHHHH.TTHHHHHHHHTTS CS
   DNA_pol_B  369 lskepeny.ksknlphlevakrlkkrneeapevgdrisYvivekkkevkkknllaseraedp.eyvle.knlpidieyYls.qllkevarlleai 459 
                  l k+pe+y + k++p ++va + k++ +e+++vgd+i+++i+ +++     + + ++ra+ p +++++ +nl++d++yYl+ q+l++v+r++++i
  EPX72706.1 1116 LGKNPEDYpNGKTMPFVQVALKKKAK-GENVRVGDVIPFIITGSDS-----EGHPADRAYGPqDVMNSnNNLTVDYNYYLThQILPPVERVIAPI 1204
                  **********************9888.89***************98.....89999******666665466********************9876 PP

>> DNA_pol_B_exo1  DNA polymerase family B, exonuclease domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.9   0.1   3.4e-50   8.6e-47       3     337 .]     360     700 ..     358     700 .. 0.90

  Alignments for each domain:
  == domain 1  score: 159.9 bits;  conditional E-value: 3.4e-50
                     CTTSEEEEEEEE---EEEEEESSCGGHH.HHHHHHHHHCCTTCCCEE..EEEEEECCCCEECCTSSCCHHC....EEEEEESSTCHHHHHHHHHH CS
  DNA_pol_B_exo1   3 eegksvcvnvfgfkpyfYceapdgkele.evkeelkelyeelskkvt..kivkvelvlkkslygyekkpvp....ylkvsvsnpnelkkirkels 90 
                     +  +s + ++ g+++++++ +  +++++ + + + k++y+e    ++  ++++++++++k+ y++e ++vp    yl+v +s++++ ++ +  l+
      EPX72706.1 360 QSFVSTFLKIDGIMRSLFFLPTASNDQSsSSSDQQKKVYDEVAGFLSklGVKEWKSKVSKYKYAFELDDVPkeadYLEVLYSYSYPQFPSD--LK 452
                     667899************99997777775777888888888877777999***********************888888888877766666..64 PP

                     HCCCCCCCCSSS--HHHHHHHHCTS-TTCEEEEETEEEEGCC--C-.SEEEEEETTTSCEETTTCC....S-EEEEEEEEEETEETTSEETTTT. CS
  DNA_pol_B_exo1  91 pleeivdvyeydvdylerflidnkivgfgwysvkkylvraegkisncdveidcdvddliakpkese....pplrvlsFDIeckskkgkfpdaens 181
                        ++++v++++++ +e+f++ ++++g++w+++++ + +  +++s+c+ve++c + + i++++es+    ppl+v+s  +++      + ++  +
      EPX72706.1 453 -GATFSHVFGTNTSLFEQFVLTRRVMGPCWLNIQNPNSDSVRNASWCRVEVSCPSAHGISVTNESKlpqtPPLTVMSLAFRT------LINSASN 540
                     .89*******************************************************************************......8888888 PP

                     .--EEEEEEEE.CCTC..SS.SEE........EEEEECCCTSS----EE--SSTCSTTEEEEEESSHHHHHHHHHHHHHHH--SEEEESSTTTTH CS
  DNA_pol_B_exo1 182 edpiiqIscvl.dglg.ekepear........klftlrecaseeeedfeltpkpeypgvkvlefdsEkelLqaflefikqydPdvitgYNidnFD 266
                     +++ ++Is+ + ++++ +    a+         + +l++++ ++ e+++  +kp      +++++sE+ lL+ fl+++++ dPdv++ ++   F+
      EPX72706.1 541 KQEMVMISARVyENVQiDRGLSANdmpsftftIIRPLKQIFPNGFESLARNHKPP-----IYCERSEISLLNSFLSKVQDFDPDVYVSHD---FE 627
                     9**********55555655555559999998888899999999999999999997.....******************************...*9 PP

                     HHH..HHHHHHHCCTCCHCG.SCCS..CTCEECCCCESEEEEEECEEEETTSEEEEHHHHHHHH.SSSSG-SHHHH CS
  DNA_pol_B_exo1 267 lpY..ilnRakelykvklsklgrln..kggrskvseigfskqarekvkisgrihlDlyrvvkrk.lklpsYkLnav 337
                       Y  +l+R+k+ +++++ ++grl+  +++rs ++++ +     e +  +gr++ Dl + + r+ +k +s++L+++
      EPX72706.1 628 TMYsvLLSRLKDRKIHNWHSIGRLRrgDWPRSYNRSSLQF---VERQIACGRLISDLSNDFGRSmIKVQSWSLSEI 700
                     99999*******************************9999...********************955777****986 PP

>> zf-DNA_Pol  DNA Polymerase alpha zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.0   8.0   6.4e-37   1.6e-33       1     185 []    1239    1404 ..    1239    1404 .. 0.79

  Alignments for each domain:
  == domain 1  score: 116.0 bits;  conditional E-value: 6.4e-37
                  XXXX-TTTTTT---EEEE-TTT--E.EEE-SSS--S.SEEEETTEEEET..TT--B--HHHHHHHHHHHHHHHHHHHHH--EEES-TTT--EES--- CS
  zf-DNA_Pol    1 sqisdeerFkdceplelrCpsCkee.fefegvfesaeeekvtasglrCsnesCkaslstaslvnqlelairkhiskYYegwlvCddptCgnrTrqls 96  
                  s++sd++rF +++p+ lrCpsC +  f++++v  s  +e++  + ++C    C  +++t+++v q +++ir +i+ YYeg lvCdd++CgnrTrq++
  EPX72706.1 1239 STLSDDQRFTNVSPMVLRCPSCFAVsFTMPSVK-SI-QETLYVNTVECD---CGFEYPTFTIVLQFTSQIRYFINLYYEGVLVCDDSSCGNRTRQMN 1330
                  5799******************77505555555.55.58999******7...********************************************* PP

                  SSTTB-S..T---BEEESS-HHHHHHHHHHHHHHT-HHHHHTT-S--S--HHHHHHHHHHTHHHHHHHHHHHHHHHHC-XXXXXXXXXXX CS
  zf-DNA_Pol   97 vygkrCla.gCkgrmrkeysekqLYnQLlYfeslfdvekalkklkkeeekkekvealaeknrerlktlkevvdkyleksgyrwVdlksLF 185 
                  vygkrC + +C+g m  ey++k+LYnQ+++  +      a+++++ +          + +   r ++l++ ++k+++++++++Vd++s+F
  EPX72706.1 1331 VYGKRCCNgNCRGSMAFEYNDKMLYNQIKFILK------AVQNTNGA----------TRNGILRCNALSNGLSKFMNNNAREFVDMASIF 1404
                  *****86637******************99532......22222222..........223344555666666666666666666666665 PP

>> DNA_pol_alpha_N  DNA polymerase alpha subunit p180 N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.2  10.0   2.9e-25   7.5e-22       2      66 .]      15      79 ..      14      79 .. 0.98
   2 ?    1.8   0.1       0.1   2.6e+02      17      30 ..     388     401 ..     381     403 .. 0.68

  Alignments for each domain:
  == domain 1  score: 77.2 bits;  conditional E-value: 2.9e-25
  DNA_pol_alpha_N  2 ekLkaaReggkkakdeyeveeeeriYdeVdeeeYkklvrkrleeddFvvDDdgegYvddGeedwd 66
                     ++L+a+Re+gk++++ ye +ee+++Yd+V+eeeY k+vr+rl++ddFvvDD+g gYvd+G ++wd
       EPX72706.1 15 AELRALREAGKTRATVYEDKEEDDLYDKVSEEEYLKVVRQRLDQDDFVVDDNGAGYVDNGYDEWD 79
                     69***************989********************************************8 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.1
  DNA_pol_alpha_N  17 eyeveeeeriYdeV 30 
                      ++  ++++++YdeV
       EPX72706.1 388 SSSSDQQKKVYDEV 401
                      2344599******9 PP

>> DNA_pol_B_2  DNA polymerase type B, organellar and viral
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.0   7.2e-06     0.018     211     250 ..     824     863 ..     815     884 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 7.2e-06
  DNA_pol_B_2 211 kayrGGrc.ypsvlgiyeeniyvyDvnSlYPsamthypmPy 250
                    y GG + +p  +g y+  i v D+nSlYPs+  +y + +
   EPX72706.1 824 DKYKGGLVfEPQ-KGLYDTCILVMDFNSLYPSIIQEYNICF 863
                  679*****8888.********************99876655 PP

>> CAP_assoc_N  CAP-associated N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.7   6.5e-05      0.17      60     130 ..     985    1055 ..     977    1058 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 6.5e-05
  CAP_assoc_N   60 kpfkigesleevekklgipeeveveikkgsyrfelseedlnerplvkvdgtyatlffDqetnkvtsvryld 130 
                     + ++++ ++ ++ l i +e++ +++++  ++e++ +++ +r l + +++ya l +D + n v+ v+ ld
   EPX72706.1  985 DSVMLNTNVTDKQQALVIGNEFKEKVNERYRKLEIDIDNVYQRMLLHAKKKYAALQVDDQGNSVLDVKGLD 1055
                   5677899999999*********************************************9999999888777 PP

>> YL1  YL1 nuclear protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   8.5    0.0044        11       8     115 ..      24     152 ..      13     193 .. 0.48

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0044
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         YL1   8 GnrlkkLleqeeeedelellFaEeedDeefeseeeeeeee...................nsDsdfdsdeedeesdeeedeeegekelerqerkkrkkek 87 
                 G+  ++             +++++e+D+ + + +eee  +                    +D   d+ +      + +d+ee e+   ++ rkk+ k  
  EPX72706.1  24 GKTRAT-------------VYEDKEEDDLYDKVSEEEYLKvvrqrldqddfvvddngagYVDNGYDEWD-----RGYSDDEETEETGSKKPRKKKTKHA 104
                 444344.............45555555555555443333355555532222211111111554443333.....3334444444444455555553444 PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxx....................x RF
         YL1  88 kkrkaqkkkskkkkkkqkkkkkkkidp....................q 115
                    ++++ +s+ +k+k ++ +  + +                     +
  EPX72706.1 105 LADNNSQPISSFFKAKPIQPSSHSSKHesnndddfmaqilgsvdqeiS 152
                 555555555555554444433333222555566666666665554331 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1406 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       708  (0.0394891); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.86u 0.30s 00:00:01.15 Elapsed: 00:00:00.48
# Mc/sec: 8824.29
//
Query:       EPX72707.1  [L=250]
Description: 60S ribosomal protein L7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.6e-22   78.4  19.5    3.6e-22   78.4  19.5    1.9  2  Ribosomal_L30_N  Ribosomal L30 N-terminal domain
    9.1e-20   70.3   1.6    1.8e-19   69.4   1.6    1.5  1  Ribosomal_L30    Ribosomal protein L30p/L7e


Domain annotation for each model (and alignments):
>> Ribosomal_L30_N  Ribosomal L30 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.4  19.5     4e-26   3.6e-22       1      70 [.      15      84 ..      15      86 .. 0.99
   2 ?   -1.5   0.1      0.35   3.2e+03      30      40 ..     148     158 ..     147     159 .. 0.86

  Alignments for each domain:
  == domain 1  score: 78.4 bits;  conditional E-value: 4e-26
  Ribosomal_L30_N  1 vPEsllKKrkrneklkakrakkaaakkkankkkrklifkRaekYvkEYrqkereeirlkReAkkaGnfyv 70
                     vPEsl KK+k++e+++++r ++aa+kk a +kkr+li kRae+Y++EYr++ere+i+l+R+A+++Gnfyv
       EPX72707.1 15 VPESLRKKTKTQEQAREQRVAAAAEKKNATQKKRELIAKRAEAYEAEYRAAEREQIDLARKARAEGNFYV 84
                     8********************************************************************9 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.35
  Ribosomal_L30_N  30 nkkkrklifkR 40 
                      +k+ r+li+kR
       EPX72707.1 148 RKAVRELIYKR 158
                      7899999*999 PP

>> Ribosomal_L30  Ribosomal protein L30p/L7e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.4   1.6     2e-23   1.8e-19       1      51 []      91     141 ..      91     141 .. 0.99

  Alignments for each domain:
  == domain 1  score: 69.4 bits;  conditional E-value: 2e-23
                    EEEEE-S-STTS-HHHHHHHHHTT-SSTT.EEEE--SSHHHHHHHHHCCCGE CS
  Ribosomal_L30   1 lfVtrirsiigvppkvrktLqlLgLrkin.gtvvklntpsirGmLkkVkhlV 51 
                    +fV+rir+i+++ppk rk++qlL+L +in g+++k n++++  mL+ V+++V
     EPX72707.1  91 IFVVRIRGINNIPPKARKIMQLLRLLQINnGVFIKFNKATKE-MLQVVEPYV 141
                    6*****************************************.********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1967  (0.109711); expected 358.6 (0.02)
Passed bias filter:                      990  (0.0552178); expected 358.6 (0.02)
Passed Vit filter:                       107  (0.00596798); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.31s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 1695.66
//
Query:       EPX72708.1  [L=1316]
Description: oxoprolinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   1.6e-211  703.2   0.3   2.1e-211  702.8   0.3    1.1  1  Hydantoinase_B  Hydantoinase B/oxoprolinase
   2.4e-106  355.2   1.1   5.8e-106  354.0   0.1    2.0  2  Hydantoinase_A  Hydantoinase/oxoprolinase
    6.8e-62  208.3   1.9    9.2e-61  204.6   0.0    2.5  2  Hydant_A_N      Hydantoinase/oxoprolinase N-terminal region


Domain annotation for each model (and alignments):
>> Hydantoinase_B  Hydantoinase B/oxoprolinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  702.8   0.3  3.5e-215  2.1e-211       1     515 [.     747    1281 ..     747    1282 .. 0.97

  Alignments for each domain:
  == domain 1  score: 702.8 bits;  conditional E-value: 3.5e-215
  Hydantoinase_B    1 DpitlevfrnrlmsiaeemgrtlqrtaiSpnikerlDfscalfdadgelvaqaphipvhlgsmseavkavlekfegelkpGDvlltNdPyagg 93  
                      Dp+ l+v+ +r+m++ae+mgr+lq+t++S+n+kerlD+scalfda+g+lva+aph+pvhlgsms++v++++   +g+l+pGDvl+tN+P  gg
      EPX72708.1  747 DPVYLSVLGSRFMAVAEQMGRALQKTSVSTNVKERLDYSCALFDANGDLVANAPHMPVHLGSMSTCVRKQAMINKGSLNPGDVLVTNHPSFGG 839 
                      9**********************************************************************88899***************** PP

  Hydantoinase_B   94 tHlpDitvitPvfhegelvffvasraHhaDiGGitpGsmppdateifeEGlrippvklveege.leedvlelllanv.........Rtpednl 176 
                      tHlpDit+itP f +ge++f+vasraHhaDiGGi pGsmp++++e+ eEG+ i++ klv +g+ +ee++++ll + +         R+++dnl
      EPX72708.1  840 THLPDITTITPYFEDGEIIFYVASRAHHADIGGILPGSMPSTSKELSEEGASIKSEKLVINGVfQEEKMIDLLYHDPgkveggsgtRCLRDNL 932 
                      ********************************************************************************************* PP

  Hydantoinase_B  177 gDlkAqiaanqvgerrlkelieeyGldtveaamdeildnaeravraalaelpd...gtyeaedylddgipikvtvtidgde..atvDftgtsp 264 
                      +DlkAq+a+nq+g++++++li+eyG++ v ++m++i++nae +vr++l  +++   +++ aed++ddg++i++++tid+++  a++Df+gt +
      EPX72708.1  933 NDLKAQVASNQKGINLITNLIKEYGKNSVLRYMKAIQNNAEISVRKLLIGVRKtfgQDLVAEDFMDDGSRISLRITIDDKTgdAIFDFDGTTE 1025
                      ************************************************7777777688*******************99999*********** PP

  Hydantoinase_B  265 qvkgniNaplavtlsaviyvlrclvdediplNeGclrpievklpegsllnpsepaavvggnvetsqrvvdvvlkalaqalpervaAasqgtmn 357 
                      +v+gn+Nap+avt+sa+iy+lr+lv+e+iplN+Gcl pi+v++p++++l+pse aavvggnv+tsqr++d++lka++      ++Aasqg++n
      EPX72708.1 1026 EVYGNTNAPEAVTYSAIIYCLRVLVSENIPLNQGCLLPIKVRIPDNCFLKPSESAAVVGGNVLTSQRITDTILKAFQ------ACAASQGDTN 1112
                      *****************************************************************************......********** PP

  Hydantoinase_B  358 nltf..ggvderg...geffgyyetiagGaGArpgkdGasavhvhmtntrntdvEilErryPvlverfelrpdsgGaGkyrGGdGvvreiefl 445 
                      nltf  gg+++++      fgyyeti+gG+GA+ g+dG+s+vh+hmtntr+td E++ErryPv++++f++r+dsgG+GkyrGGdGv+r+ief+
      EPX72708.1 1113 NLTFgiGGRNHETgeiIPGFGYYETICGGSGACDGMDGTSGVHTHMTNTRITDLEVFERRYPVILKEFSIRKDSGGKGKYRGGDGVIRDIEFR 1205
                      ***93335555559996677************************************************************************* PP

  Hydantoinase_B  446 epevtvsilserrvfapwGlaGGepGargrvvlnllvr..........geeenlggkatvelkagdvlvietpGGGGyGd 515 
                       p vt+silserr+++p+G++GGe++++g+   n++v+           +++nlgg++t+++ agd ++i+tpGGGGyG 
      EPX72708.1 1206 IP-VTLSILSERRAYHPYGMKGGEDAKCGK---NIWVKrstdeegnckIRRINLGGRNTCHIGAGDHIEIHTPGGGGYGP 1281
                      *9.***************************...8887778888899999******************************6 PP

>> Hydantoinase_A  Hydantoinase/oxoprolinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1      0.15   9.1e+02      82      97 ..       5      20 ..       3      31 .. 0.84
   2 !  354.0   0.1  9.7e-110  5.8e-106       1     290 [.     239     540 ..     239     541 .. 0.98

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.15
  Hydantoinase_A 82 ItfDmGGTstDvslik 97
                    I +D GGT tDv++  
      EPX72708.1  5 IHIDRGGTFTDVIATV 20
                    889********98765 PP

  == domain 2  score: 354.0 bits;  conditional E-value: 9.7e-110
  Hydantoinase_A   1 rtetavvnAylspilreylesvekslekrgak......arlmvmqsdGglvsadearkkpvetilSGPaaGvvgaaat.sklagekkvItfDmGG 88 
                     r+++a+ +Aylsp++r+yl+++++ + +  ++       r+ +mqsdGgl++++++++   ++ilSGPa+Gvvg+a t ++++++ +vI+fDmGG
      EPX72708.1 239 RATSATADAYLSPVVRRYLSGFQSGFLHGLKTqghpegVRCEFMQSDGGLADVNKFSGL--RAILSGPAGGVVGFALTsYDENTNIPVIGFDMGG 331
                     7889**********************9977779999**********************9..*****************89999************ PP

  Hydantoinase_A  89 TstDvslikdgevevsleteiagvkvrlpaldirtvgagGgsilvvdeggklrvgpesagadpgpacyrkGgteltvTDanlvLGrlqpedfls. 182
                     TstDvs++  g +e+++et++agv++++p+ldi+tv+agGgs+l ++++g + vgpesaga+pgp+cyrkGg  ltvTDanl+LGrl pe+f++ 
      EPX72708.1 332 TSTDVSRYG-GAYEHVFETTTAGVTIQSPQLDINTVAAGGGSRL-FWKNGLFVVGPESAGAHPGPVCYRKGG-YLTVTDANLLLGRLLPEYFPKi 423
                     *********.**********************************.***************************.********************** PP

  Hydantoinase_A 183 .gpdgdqkldvelarrafeelakelnlk........veevAegilsvavenmanavrklsvergldpkeltlvvfGGaGaqhaaalaeelgvkkv 268
                      gp +dq+ldve++r++feel++e+n +        ++evA+g++++a+e+ma+++r l++++g+d++ + l++fGGaG+qh+ a+a++lg+++v
      EPX72708.1 424 fGPTEDQPLDVEATRKKFEELTEEINSGisesqrmsADEVAYGFIKIANETMARPIRALTEAKGHDISIHRLTSFGGAGGQHCVAIAQSLGISQV 518
                     *********************************************************************************************** PP

  Hydantoinase_A 269 ivppyagvlsalGmalAdvree 290
                     +v++y+++lsa+GmalAdv +e
      EPX72708.1 519 LVHKYSSILSAYGMALADVVSE 540
                     ******************9875 PP

>> Hydant_A_N  Hydantoinase/oxoprolinase N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  204.6   0.0   1.5e-64   9.2e-61       1     178 []       4     220 ..       4     220 .. 0.98
   2 ?    2.3   0.6      0.02   1.2e+02       2      14 ..     325     337 ..     324     355 .. 0.82

  Alignments for each domain:
  == domain 1  score: 204.6 bits;  conditional E-value: 1.5e-64
  Hydant_A_N   1 rigIDvGGTfTDavaldeke.eevavlKllst.....pdavaegirealeevleesipr.....tskidvvrmGTTvatNallerkgervaLittkgfr 88 
                 +i+ID+GGTfTD++a+  ++ +e +v+Klls+     +da +e++r++le   ++ ipr     ts+i+++r+GTTvatNallerkger+a+ittkgf+
  EPX72708.1   4 KIHIDRGGTFTDVIATVTDNsREPIVTKLLSEdpnnyKDASIEAVRRVLEIYHGKRIPRnekldTSCISHLRCGTTVATNALLERKGERCAFITTKGFK 102
                 699***********987666699**************************************************************************** PP

  Hydant_A_N  89 dlleigrqnrpdlfelrikkplvlyeevvevdervead............................gevlkpldeeevrealkalkaagvesiavvllh 159
                 d l ig+q+rp++fel i++p vly++vve+derv+++                            +++lk+ldee+vr++l++l+++g++siav+l+h
  EPX72708.1 103 DGLVIGNQSRPNIFELAIRRPDVLYSKVVEIDERVTLEdfvedpsgcktkidgnnpslvlgrsgeaVRILKKLDEESVRKDLQKLRDEGFTSIAVCLAH 201
                 *************************************99************************************************************ PP

  Hydant_A_N 160 SylnpehElrvaeiareig 178
                 S+++p+hE++v+++a+e+g
  EPX72708.1 202 SFTYPDHEIAVGKLAKEYG 220
                 ***************9975 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.02
  Hydant_A_N   2 igIDvGGTfTDav 14 
                 ig D+GGT TD+ 
  EPX72708.1 325 IGFDMGGTSTDVS 337
                 899********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1316 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       574  (0.0320152); expected 358.6 (0.02)
Passed bias filter:                      554  (0.0308997); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.86u 0.32s 00:00:01.18 Elapsed: 00:00:00.50
# Mc/sec: 7962.95
//
Query:       EPX72709.1  [L=257]
Description: hypothetical protein SOCG_00471 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        2.3    7.4  10.7          3    7.0  10.7    1.1  1  ORC6      Origin recognition complex subunit 6 (ORC6)


Domain annotation for each model (and alignments):
>> ORC6  Origin recognition complex subunit 6 (ORC6)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0  10.7   0.00017         3      63     192 ..      83     215 ..      65     225 .. 0.73

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.00017
        ORC6  63 svkkiPlppkaykklldlfrqsLsnsssatstPskspsspstdpkslrkqlfsTPtKsktlktalsa.sksssplkrrrklaneedgeeeeedapswvs 160
                 sv++ P  + + ++l d+f  + s s   t+ Ps+s ss+s +  + ++  f+TP++ +  + +++  +  s pl+++    ++ ++e +      +v 
  EPX72709.1  83 SVSHNPPYESVHSSLTDSFGINQSVS---TPPPSSSSSSSSSSSSTPNNLDFQTPSSFEHAQAQSKSgPFVSQPLSKLSSPIQDSSKEFDFTHPSLQVH 178
                 66777777777777777776644444...47788888888888888888899****9998888877788888888888888888888888666444555 PP

        ORC6 161 tsirdsrpeisrtlspskslgdesilfndss.....d 192
                  s+  + +++s++++ps ++++ s+++n+ s      
  EPX72709.1 179 SSSLPTHLSNSYPRDPSHEINSRSFFENEFSnvpytT 215
                 5555899999999999999999999888766555443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       962  (0.0536561); expected 358.6 (0.02)
Passed bias filter:                      500  (0.0278878); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 1858.45
//
Query:       EPX72710.1  [L=593]
Description: zf-C2H2 type zinc finger protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.7e-16   59.4   5.7    4.5e-16   58.7   5.7    1.4  1  Fungal_trans  Fungal specific transcription factor domain
    1.7e-08   34.5  15.6      7e-05   23.1   1.2    3.0  2  zf-C2H2       Zinc finger, C2H2 type
    0.00013   22.5  16.3      0.012   16.4   0.6    3.2  2  zf-C2H2_4     C2H2-type zinc finger
     0.0011   19.0   0.2     0.0011   19.0   0.2    2.3  2  zf-C2H2_6     C2H2-type zinc finger
  ------ inclusion threshold ------
      0.031   14.9   0.2      0.077   13.7   0.2    1.7  1  Zn_ribbon_2   Putative zinc ribbon domain
      0.039   14.1   3.0      0.082   13.0   3.0    1.6  1  Zn-ribbon_8   Zinc ribbon domain
       0.04   14.4   8.1       0.86   10.1   0.2    2.8  2  zf-C2HE       C2HE / C2H2 / C2HC zinc-binding finger
       0.15   12.7   0.2       0.15   12.7   0.2    2.3  2  zf-C2H2_3rep  Zinc finger C2H2-type, 3 repeats
       0.17   11.9  14.3       0.84    9.7  10.4    2.7  2  zf-BED        BED zinc finger
       0.44   11.1  16.3        8.1    7.1   4.9    3.6  3  zf-H2C2_2     Zinc-finger double domain
       0.56   10.6   5.8       0.76   10.1   0.0    2.7  2  zf-C2H2_jaz   Zinc-finger double-stranded RNA-binding


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.7   5.7   2.8e-19   4.5e-16       4     230 ..     160     362 ..     157     443 .. 0.79

  Alignments for each domain:
  == domain 1  score: 58.7 bits;  conditional E-value: 2.8e-19
  Fungal_trans   4 ffsnfhpqfpilhkpsflpktssenssksayaspllllailalGalfsesetkesnssltsesqefiafplraeilihedfsspssslwilqsLlll 100
                   +f++fhp +pilh+psf  +             + ++ +i  +G+++++ e+  +   l  +s     ++   +i+i +d++++++ lw++q+ +l+
    EPX72710.1 160 YFEWFHPILPILHRPSFRIEG----------VAASFIRSISLIGCYSTGIESDATLGLLFWDS-----GFHLLQIYIQNDAEKNAT-LWVIQTRFLF 240
                   9********************..........***********************988888776.....333456778799999999.*****88888 PP

  Fungal_trans 101 elyektssdralherhhgvavr.larslgLhrnpsyvgkks..lwklweeeaesrrRlwwaaFylDktialklGrppllddsqinlpLPcddddlwe 194
                   ++ ++ +++++++  +    +r l ++ + +++ +     +  ++ + +e  esr+R+ +++++l+ ++a  ++r+p l+ +++++pLP d+ ++++
    EPX72710.1 241 CISSL-FEKTSSFASIGQSLLRdLIHDFRTQGWTALPPIPKvsSISSFIE-YESRKRIVFSTYILEYLLAAFFNRNPSLSFQELQMPLPFDEFFWDS 335
                   76554.55567888888888888888888888887766666756666677.**************************99****************** PP

  Fungal_trans 195 sddaseetlvetklsneeksrkiasfllaLkkilsk 230
                   +++ +ee++             ++sf ++L k+ ++
    EPX72710.1 336 ATSLEEEEQWK---------QTPPSFQSCLGKLSNG 362
                   *******9999.........4455555555555555 PP

>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   1.2   4.3e-08     7e-05       1      23 []      39      61 ..      39      61 .. 0.96
   2 !   15.5   7.3   1.1e-05     0.018       2      23 .]      68      89 ..      67      90 .. 0.94

  Alignments for each domain:
  == domain 1  score: 23.1 bits;  conditional E-value: 4.3e-08
                EEETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2  1 ykCpdCgksFkrksnLkrHirtH 23
                + C+ Cgk+F+r +nL+rH  +H
  EPX72710.1 39 FICETCGKRFTRLENLTRHKLSH 61
                78*****************9999 PP

  == domain 2  score: 15.5 bits;  conditional E-value: 1.1e-05
                EETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2  2 kCpdCgksFkrksnLkrHirtH 23
                +C++C++ +kr ++LkrHi++H
  EPX72710.1 68 YCKYCHQACKRTDLLKRHIQRH 89
                6********************6 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.6   7.2e-06     0.012       1      23 [.      39      61 ..      39      62 .. 0.96
   2 !   11.8   6.4   0.00021      0.34       2      24 .]      68      90 ..      67      90 .. 0.96

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 7.2e-06
   zf-C2H2_4  1 fkCpiCgksFsskkaLlrHlkth 23
                f+C+ Cgk+F++ ++L rH ++h
  EPX72710.1 39 FICETCGKRFTRLENLTRHKLSH 61
                89******************999 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 0.00021
   zf-C2H2_4  2 kCpiCgksFsskkaLlrHlkthH 24
                +C++C++ +++ + L+rH+++hH
  EPX72710.1 68 YCKYCHQACKRTDLLKRHIQRHH 90
                7********************** PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.2   6.5e-07    0.0011       2      24 ..      39      61 ..      39      63 .. 0.95
   2 ?   -1.6   0.8       1.8     3e+03       4       8 ..      69      73 ..      69      75 .. 0.87

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 6.5e-07
   zf-C2H2_6  2 heCsvCsksFpslqaLggHkksH 24
                ++C +C+k+F  l +L+ Hk sH
  EPX72710.1 39 FICETCGKRFTRLENLTRHKLSH 61
                89******************998 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.8
   zf-C2H2_6  4 CsvCs 8 
                C++C+
  EPX72710.1 69 CKYCH 73
                99998 PP

>> Zn_ribbon_2  Putative zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.2   4.8e-05     0.077       1      39 [.      40      80 ..      40     126 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 4.8e-05
  Zn_ribbon_2  1 iCqsCGmplkkeedlgtea..dgsksedYCkyCykdGefte 39
                 iC++CG  +++ e+l +++  + ++++ YCkyC +  + t+
   EPX72710.1 40 ICETCGKRFTRLENLTRHKlsHDDTKNIYCKYCHQACKRTD 80
                 7********9999887665225677788*****99877665 PP

>> Zn-ribbon_8  Zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   3.0     5e-05     0.082       6      38 ..      39      78 ..      38      79 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 5e-05
  Zn-ribbon_8  6 YrCeeCghefe.....vlqsis.daplta.CPeCgsevrr 38
                 + Ce Cg++f+      +++ s d+ +   C+ C+++++r
   EPX72710.1 39 FICETCGKRFTrlenlTRHKLShDDTKNIyCKYCHQACKR 78
                 67*********9999977777777777777******9988 PP

>> zf-C2HE  C2HE / C2H2 / C2HC zinc-binding finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.2   0.00052      0.86      22      57 ..      24      57 ..      11      62 .. 0.77
   2 ?    6.0   2.9      0.01        17      38      61 ..      67      89 ..      63      92 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00052
     zf-C2HE 22 eslseeqskelilktpLkCtrCganfgnkfpkLKeH 57
                ++ s+++ + l  k+p++C  Cg + +  + +L +H
  EPX72710.1 24 KRKSSQDLDGL-QKRPFICETCG-KRFTRLENLTRH 57
                44555556666.9**********.888999999988 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.01
     zf-C2HE 38 LkCtrCganfgnkfpkLKeHLeee 61
                  C +C+ + ++    LK+H++ +
  EPX72710.1 67 IYCKYCH-QACKRTDLLKRHIQRH 89
                56*****.**************99 PP

>> zf-C2H2_3rep  Zinc finger C2H2-type, 3 repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.2   9.4e-05      0.15      72     121 ..       6      58 ..       2      63 .. 0.74
   2 ?   -0.0   1.0      0.82   1.3e+03      33      62 ..      67      96 ..      60     127 .. 0.58

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 9.4e-05
  zf-C2H2_3rep  72 sasedssqklelsksasve.nnsenesgvrk..fvcrfcGlkfdllpdlGrhh 121
                   sas++s+q +++++ a v+ ++s++ +g++k  f+c  cG +f  l +l rh+
    EPX72710.1   6 SASSSSTQCVDPNDGAGVKrKSSQDLDGLQKrpFICETCGKRFTRLENLTRHK 58 
                   556667777888888888745556666654334******************97 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.82
  zf-C2H2_3rep 33 lqcipcgshfgnaeelwlhvlsvhpsdfkl 62
                  + c  c +    ++ l  h++  h++ + +
    EPX72710.1 67 IYCKYCHQACKRTDLLKRHIQRHHSDVLPK 96
                  456666666666666666666666555544 PP

>> zf-BED  BED zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.4     0.061        99      17      38 ..      39      57 ..      29      62 .. 0.81
   2 ?    9.7  10.4   0.00052      0.84      13      44 .]      63      91 ..      56      91 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.061
                -EETTTTEE----SSTHHHHHH CS
      zf-BED 17 avCryCgkilsrgggttnLkrH 38
                 +C  Cgk ++r     nL rH
  EPX72710.1 39 FICETCGKRFTRL---ENLTRH 57
                68*********95...777777 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00052
                GSS--EETTTTEE----SSTHHHHHHHHHS-H CS
      zf-BED 13 keqkavCryCgkilsrgggttnLkrHLrrkHp 44
                + ++++C+yC+   +r   t  LkrH++r H+
  EPX72710.1 63 DTKNIYCKYCHQACKR---TDLLKRHIQRHHS 91
                6799************...8***********6 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.2    0.0082        13      11      26 .]      35      50 ..      34      50 .. 0.88
   2 ?    7.1   4.9     0.005       8.1       1      25 [.      53      77 ..      53      78 .. 0.93
   3 ?    4.1   0.3     0.044        72       2      11 ..      82      91 ..      82     102 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0082
   zf-H2C2_2 11 gekpyeCplCdkaFkt 26
                +++p+ C+ C+k+F++
  EPX72710.1 35 QKRPFICETCGKRFTR 50
                578999********85 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.005
   zf-H2C2_2  1 nLrrHirkHtgekpyeCplCdkaFk 25
                nL+rH  +H   k   C++C+ a k
  EPX72710.1 53 NLTRHKLSHDDTKNIYCKYCHQACK 77
                8********************9987 PP

  == domain 3  score: 4.1 bits;  conditional E-value: 0.044
   zf-H2C2_2  2 LrrHirkHtg 11
                L+rHi  H++
  EPX72710.1 82 LKRHIQRHHS 91
                89*****994 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00046      0.76       2      24 ..      39      61 ..      38      62 .. 0.93
   2 ?    0.4   3.0      0.54   8.8e+02       2      21 ..      67      86 ..      66      87 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00046
                 CBBTTTTBBBSSHHHHHCCTTSH CS
  zf-C2H2_jaz  2 fYCvlCdKyFksenaldnHlkSK 24
                 f C++C K F   ++l  H+ S+
   EPX72710.1 39 FICETCGKRFTRLENLTRHKLSH 61
                 99*****************9886 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.54
                 CBBTTTTBBBSSHHHHHCCT CS
  zf-C2H2_jaz  2 fYCvlCdKyFksenaldnHl 21
                  YC++C   +k    l+ H+
   EPX72710.1 67 IYCKYCHQACKRTDLLKRHI 86
                 6*****87777777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (593 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       719  (0.0401026); expected 358.6 (0.02)
Passed bias filter:                      499  (0.027832); expected 358.6 (0.02)
Passed Vit filter:                        66  (0.00368119); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 4017.40
//
Query:       EPX72711.1  [L=501]
Description: nicotinic acid plasma membrane transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.7e-40  137.3  18.7    7.1e-40  137.0  17.8    1.5  2  MFS_1           Major Facilitator Superfamily
  ------ inclusion threshold ------
      0.056   13.9   0.0        1.8    9.0   0.0    2.7  3  G0-G1_switch_2  G0/G1 switch protein 2
       0.22   11.8   5.6         10    6.4   0.0    3.0  2  DUF1772         Domain of unknown function (DUF1772)
        1.9    8.5   0.0        1.9    8.5   0.0    3.4  4  FixQ            Cbb3-type cytochrome oxidase component FixQ
          4    6.1   9.5         11    4.6   1.5    3.3  2  DUF2207         Predicted membrane protein (DUF2207)


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.0  17.8     2e-43   7.1e-40       2     352 ..      69     432 ..      68     433 .. 0.84
   2 ?   -2.2   0.0      0.41   1.5e+03     156     173 ..     453     468 ..     440     479 .. 0.49

  Alignments for each domain:
  == domain 1  score: 137.0 bits;  conditional E-value: 2e-43
       MFS_1   2 llaaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslwlllvlrvlqGlgag 100
                  +++++++l+rs++g a    ++e+l +    ++ +++++++++++   p   l+  + + r+l +  l++++ +l+  f+ss+  l+v r++ G+ +g
  EPX72711.1  69 GFLYLMAFLDRSNIGNASVAGMSESLKLYNERLNVAISIFYVLYILVETPSVILVKHVRPSRMLAFISLAWSVVVLCSGFVSSYGGLIVTRLILGMLEG 167
                 68999*************99**************************************999966666666666636666977777************** PP

       MFS_1 101 alfpagaaliadwfpkeergraigllsagfslGailgpllgglla.sslg....Wravfyilaivsllafvlfllllpeepperkrkspkeee...... 188
                 +lfpa + +++ ++++ee+ + +++l  +++l+ ++g l++ +l    +g    W++++++ +++s++++ l l+llp++  +++  +++e++      
  EPX72711.1 168 CLFPALNLYLTTIYTREEQCQRLSYLFCASGLAGAFGGLFAYALEqVRAGnkagWQWIYIVEGLISFIGVPLSLFLLPDNIEKSWFLNKQERRvarlrn 266
                 ******************************************997555557888***************99999*************999999****** PP

       MFS_1 189 ......kgtgpaplvpawkallkdpvlwillialllfffgfsglltllplylqevlglsglllaglllallalvgailallagrlsdrlgrrrrlllal 281
                        g +++++++ + + +kdp +++  ++ +++ ++++g++++lp++ ++ lg++g l++ ++   ++++g+ ++l+a++ sdr++ r +    +
  EPX72711.1 267 eanlryLGEQEFEWKE-IHKAFKDPKVYVSAVSQFCADMVLYGFSSFLPTI-VKGLGYTG-LQSNYMTIPVYIAGVLAFLVAAYASDRTKLRSPF--LI 360
                 ****************.9999999988889999*****************7.*******8.7777677778888888899999999**8875555..55 PP

       MFS_1 282 lllllaalglallavtssavllllvlvliGfglgfvfpsllalasdla.ppeeagtasglfntagslggalg 352
                 ++ l++a+g+++l +++s+++   +++++ +g  +  ++ l ++++++ +  +++ta+g+ +t+ + +g+++
  EPX72711.1 361 SASLILAIGYIILIASNSNAAKFTACFIVAIGCYIGPGMNLGWLNNNVaGHYKRATAIGIQQTIANSSGIVA 432
                 55555555555555555555555566665554444445555555554445579*********9999999887 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.41
       MFS_1 156 ilaivsllafvlfllllp 173
                  + +v+l++ ++  l++ 
  EPX72711.1 453 GCVVVGLISYIV--LFFS 468
                 233333343222..3333 PP

>> G0-G1_switch_2  G0/G1 switch protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1       3.5   1.3e+04      59      68 ..      25      34 ..      10      53 .. 0.52
   2 ?    1.4   0.0      0.12   4.3e+02       8      43 ..     207     242 ..     202     291 .. 0.74
   3 ?    9.0   0.0   0.00052       1.8      27      63 ..     444     480 ..     438     488 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 3.5
  G0-G1_switch_2 59 eeeavaklqa 68
                      e+++++q+
      EPX72711.1 25 SMEKKQNVQQ 34
                    2222222222 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.12
  G0-G1_switch_2   8 iPfakemlsqkpsrklvklYvlGsvLallGvviglv 43 
                       +a e ++++ + +   +Y++ + ++++Gv ++l 
      EPX72711.1 207 FAYALEQVRAGNKAGWQWIYIVEGLISFIGVPLSLF 242
                     5667777888888888899***********998875 PP

  == domain 3  score: 9.0 bits;  conditional E-value: 0.00052
  G0-G1_switch_2  27 YvlGsvLallGvviglvetvcspFssesrlreeeeav 63 
                     Y+lG  ++l  vv+gl+  ++  Fs +++ r+++e+ 
      EPX72711.1 444 YILGHSFTLGCVVVGLISYIVLFFSLRHSNRKRDERC 480
                     9************************999777776655 PP

>> DUF1772  Domain of unknown function (DUF1772)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0    0.0029        10      44     120 ..     199     284 ..     168     286 .. 0.60
   2 ?    4.9   2.5    0.0087        31      39      86 ..     331     376 ..     322     386 .. 0.61

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0029
     DUF1772  44 llsalafayla.....araasrgarllylaaaallllsivpyTllvmvPtN...nkLaalkeedakekedeaevrelle...rWgrln 120
                 l+ a + + +a     +ra +++ + +++++ +l+++  vp++l++  P N   +  + ++e   ++ ++ea+ r+l e   +W+  +
  EPX72711.1 199 LAGAFGGL-FAyaleqVRAGNKAGWQWIYIVEGLISFIGVPLSLFLL-PDNiekSWFLNKQERRVARLRNEANLRYLGEqefEWKEIH 284
                 33333333.1134699889999999999999999999999*998877.5554331112222333333344455555522335776665 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.0087
     DUF1772  39 fpplallsalafaylaaraasrgarllylaaaallllsivpyTllvmv 86 
                   p+ ++ +laf+++a  + +++ r  +l++a+l+l   + y +l+  
  EPX72711.1 331 TIPVYIAGVLAFLVAAYASDRTKLRSPFLISASLIL--AIGYIILIAS 376
                 445788888888866645555555555556666633..4556555555 PP

>> FixQ  Cbb3-type cytochrome oxidase component FixQ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       0.6   2.2e+03       7      30 ..     188     211 ..     185     213 .. 0.81
   2 ?   -3.4   0.8       2.8   9.9e+03      11      23 ..     335     347 ..     334     348 .. 0.70
   3 ?   -3.2   0.1       2.4   8.6e+03      18      34 ..     363     379 ..     358     383 .. 0.63
   4 ?    8.5   0.0   0.00052       1.9      11      42 ..     450     481 ..     445     485 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.6
        FixQ   7 rgfadswgllflvllfygvviyaf 30 
                 + +++ +    l++ f g+ +ya+
  EPX72711.1 188 QRLSYLFCASGLAGAFGGLFAYAL 211
                 667778888889999999999997 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2.8
        FixQ  11 dswgllflvllfy 23 
                 +++g l++++  y
  EPX72711.1 335 YIAGVLAFLVAAY 347
                 6778888887766 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 2.4
        FixQ  18 lvllfygvviyafrpgn 34 
                  ++l +g++i +   +n
  EPX72711.1 363 SLILAIGYIILIASNSN 379
                 56778888876666655 PP

  == domain 4  score: 8.5 bits;  conditional E-value: 0.00052
        FixQ  11 dswgllflvllfygvviyafrpgnrkdfedaA 42 
                  ++g ++  l+ y+v+++ +r +nrk+ e+ A
  EPX72711.1 450 FTLGCVVVGLISYIVLFFSLRHSNRKRDERCA 481
                 6889999******************9977766 PP

>> DUF2207  Predicted membrane protein (DUF2207)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   1.5    0.0031        11     408     433 ..     217     351 ..       3     358 .. 0.49
   2 ?    3.8   0.4    0.0054        19     381     436 ..     356     474 ..     347     484 .. 0.74

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.0031
     DUF2207 408 l.................................................................................................. 408
                 +                                                                                                  
  EPX72711.1 217 Gnkagwqwiyiveglisfigvplslfllpdniekswflnkqerrvarlrneanlrylgeqefewkeihkafkdpkvyvsavsqfcadmvlygfssflpt 315
                 033333333333333333333333333344555555555555555555555555555555555555555555555555555555555555555555555 PP

     DUF2207 409 ...........lvfllilllillliaiivlllfsrl 433
                            ++++ i+++i +++a++v++++s +
  EPX72711.1 316 ivkglgytglqSNYMTIPVYIAGVLAFLVAAYASDR 351
                 555566666666666666666666666666666555 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.0054
     DUF2207 381 kklsalglgliilglilillallllvll...............................................................lvfllill 416
                   + + + +++ +g+i++++++  ++ +                                                                  + + +
  EPX72711.1 356 SPFLISASLILAIGYIILIASNSNAAKFtacfivaigcyigpgmnlgwlnnnvaghykrataigiqqtianssgivagqiyrstsapryilGHSFTLGC 454
                 555555555555555555555554444467777777777777777778899999999999999999999999999999999999999999988899999 PP

     DUF2207 417 lillliaiivlllfsrllgr 436
                 ++++li+ ivl+++ r   r
  EPX72711.1 455 VVVGLISYIVLFFSLRHSNR 474
                 99999999999998776555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (501 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       962  (0.0536561); expected 358.6 (0.02)
Passed bias filter:                      597  (0.033298); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.62u 0.30s 00:00:00.92 Elapsed: 00:00:00.44
# Mc/sec: 3439.47
//
Query:       EPX72712.1  [L=296]
Description: DUF1445 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-56  189.6   0.0    3.8e-56  189.0   0.0    1.3  1  DUF1445   Protein of unknown function (DUF1445)
  ------ inclusion threshold ------
       0.22   11.9   0.0       0.48   10.8   0.0    1.5  1  MgtC      MgtC family


Domain annotation for each model (and alignments):
>> DUF1445  Protein of unknown function (DUF1445)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  189.0   0.0   4.2e-60   3.8e-56       1     143 []     146     291 ..     146     291 .. 0.99

  Alignments for each domain:
  == domain 1  score: 189.0 bits;  conditional E-value: 4.2e-60
     DUF1445   1 VaFliGcSfsfeeaLleaglpvrhveqgrnvpmYktniplapagvfsgklvvsmrpikkekvervveitrrfkkvhgePvhigdp..ealgikdlskpd 97 
                 V+FliGcSfsfe+aL++a+l +rh+ +g+  pm++tn+ l+p+gvfsg++vvsmrp+k++++  v++it+++++ hgeP+++g++  ++lgik++ +pd
  EPX72712.1 146 VGFLIGCSFSFEAALVAANLVPRHLPSGNPPPMFNTNLLLCPSGVFSGTFVVSMRPYKEKDIPLVRRITAAYTDCHGEPIAWGWDgaKQLGIKNVMQPD 244
                 89************************************************************************************9************ PP

     DUF1445  98 yGdaveieegevPvFWacgvtpqeavmsakl.elvithapghmlvtD 143
                 yG +v +ee+evPvFW+cgvtpq++vm +kl e v +h+pg m++tD
  EPX72712.1 245 YGFPVLFEEDEVPVFWGCGVTPQNVVMMSKLpEPVYSHKPGFMFITD 291
                 *******************************99*************9 PP

>> MgtC  MgtC family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   5.4e-05      0.48      71     106 ..     128     163 ..     110     167 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 5.4e-05
        MgtC  71 gakvkglTTaaslwvtaaiGllvglglyllavvatv 106
                 g+ +k lTT    w +  +G+l+g+ + ++a+++++
  EPX72712.1 128 GKFTKELTTISNQWSSSYVGFLIGCSFSFEAALVAA 163
                 456799********************9888877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (296 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       357  (0.0199119); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 2139.27
//
Query:       EPX72713.1  [L=221]
Description: phosphoglycerate mutase family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.6e-22   78.0   0.0    9.5e-22   77.6   0.0    1.1  1  His_Phos_1  Histidine phosphatase superfamily (branch 1)


Domain annotation for each model (and alignments):
>> His_Phos_1  Histidine phosphatase superfamily (branch 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.6   0.0   5.3e-26   9.5e-22       1     189 [.      14     216 ..      14     220 .. 0.88

  Alignments for each domain:
  == domain 1  score: 77.6 bits;  conditional E-value: 5.3e-26
                 EEEEE---BTTB--.....TT----B-HHHHHHHHHHHHHHTT..S---EEEE-SSHHHHHHHHHHHHCTT.......--EEE-GGGS----GGGT.T- CS
  His_Phos_1   1 lyLvRHGetewnaegr.lqgrtdvpLteeGreqAealaerlag..epidaiysSplkRarqTaeliaealg.......lpveldegLrEidfGdwe.gl 88 
                 +yL+RHG+  +n+         d+ Lt++G+eq ++l + la+  +pidai++Sp++R+ qT+el ++          +pv + + ++E+    ++ gl
  EPX72713.1  14 VYLIRHGQALHNVGPNeDHSIRDPVLTDLGIEQSKRLSKQLADqnVPIDAIVCSPMRRTLQTMELGLKDYLknqnaeeIPVYINPLFEEVGSLPCDiGL 112
                 69*********87766668999*********************999******************96654434777999***********99888889** PP

                 B.HHHHHH..HSHHHHHHHHH-GGG-B..S-BHHHHHHHHHHHHHHHHHHTTTSEEEEEE-HHHHHHHHHHHH.T--GGGGG.GB---TT-EEEEEE-S CS
  His_Phos_1  89 ttaeiaeeypeeleawlrdpadvrppg..gEsledvaaRvaaaleelaarhegetvlvVsHggvirallarll.glpleelr.rleldnaslsvlefde 183
                 +  e+ ++yp++  +  +d   ++  +   E +e    R ++ale l +  +++ ++vV+H ++ir ll ++  g+++++l+ ++ ++n++  + ++++
  EPX72713.1 113 EVLELSRTYPQYDLKACSDGIYPEKRDiySEDIEISIVRSKSALEYLSTLPHKK-IAVVTHSAFIRFLLDKMSpGVDVNFLPpEMTFNNCEFREYRLKQ 210
                 ***********998888777644444489******************9999877.************************98856777999999888887 PP

                 S-EEEE CS
  His_Phos_1 184 ggwrlv 189
                  g +++
  EPX72713.1 211 VGKEFK 216
                 776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       306  (0.0170673); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1650.06
//
Query:       EPX72714.1  [L=196]
Description: FAD binding oxidoreductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.4e-32  113.0   0.0      2e-32  112.5   0.0    1.2  1  Flavodoxin_2  Flavodoxin-like fold
  ------ inclusion threshold ------
       0.11   12.9   0.1       0.21   12.1   0.1    1.4  1  FumaraseC_C   Fumarase C C-terminus


Domain annotation for each model (and alignments):
>> Flavodoxin_2  Flavodoxin-like fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.5   0.0   2.3e-36     2e-32       2     196 ..       4     191 ..       3     193 .. 0.87

  Alignments for each domain:
  == domain 1  score: 112.5 bits;  conditional E-value: 2.3e-36
                   EEEEEE--TTGGCCHHHCHHHHHHHHHCCCTT...TEEEEEEHHCCT-----CCCCHCCHHHHTTCHHHHHHHHHHHHCSSEEEEEEE-BTTB--HH CS
  Flavodoxin_2   2 kiLiinahprpeksfssalaqafvealekagp...hevtvrdLyadflpvlttrdlaaklayeekpadveseqiekllaadaivlqfPlwwfgvPai 95 
                   kiL++n+   + ++++++l++++ + ++++ +   h+v ++ + ++                    + +e+e  ek+ ++d++++qfP ww+g+P+ 
    EPX72714.1   4 KILLVNGAHPF-GHSQGKLNETLQNVAKETLTdlgHTVHETVVTNG--------------------YVIEEEI-EKIVSSDVVIYQFPGWWMGLPWP 78 
                   89999976666.3777999999999999998766677777777774....................8888888.*********************** PP

                   HHHHHHHHS-TTT..SC.E.....ETTCS.SCCCCTTTTSEEEEEEEESS-GGGSSTTSS..S-S-HHHHHHHHHHHHHHTT-EEEEEEEEESCT.C CS
  Flavodoxin_2  96 lKgwiDrvltagf..af.y.....teegg.egrgggLkgkkalvivttGgpeesyqergl..egaamdellpplrgilgfiGikdvepvlvegva.g 180
                   lK++iD+v+t g+   f +     t++++ +g+gg+L+gk++++++t+++p e+++e g   +g+++d +l+p++++ +f+ +++++++ +++v  +
    EPX72714.1  79 LKKYIDEVFTIGYgkLFaSdgrshTNPTKnYGKGGLLHGKSYMLSTTWNAPCEAFNEFGNffDGRGIDNVLFPVHKAHEFLAMTALPSFMANDVLkN 175
                   **********9986566558999988888899999999*******************9999999*****************************9977 PP

                   CCHHHHHHHHHHHHHH CS
  Flavodoxin_2 181 aedeealaealerlee 196
                   ++ + ++++++  l++
    EPX72714.1 176 PQVDTDISAYKLHLQK 191
                   7778888888877766 PP

>> FumaraseC_C  Fumarase C C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   2.3e-05      0.21      16      48 ..      27      60 ..      23      64 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.3e-05
                 HHHHHHHH.HT--HHHHHHHTT-.-HHHHHHHT- CS
  FumaraseC_C 16 kIAkeAlk.egktlreavlelgllteeeldelld 48
                  +Ake l   g t++e v+  g++ eee++++++
   EPX72714.1 27 NVAKETLTdLGHTVHETVVTNGYVIEEEIEKIVS 60
                 57888877459*********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       438  (0.0244297); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.27s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1404.74
//
Query:       EPX72715.1  [L=383]
Description: NADPH dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   1.4e-119  399.4   0.0   1.6e-119  399.2   0.0    1.0  1  Oxidored_FMN  NADH:flavin oxidoreductase / NADH oxidase famil
  ------ inclusion threshold ------
      0.044   13.8   0.0       0.13   12.4   0.0    1.7  1  DUF5496       Family of unknown function (DUF5496)


Domain annotation for each model (and alignments):
>> Oxidored_FMN  NADH:flavin oxidoreductase / NADH oxidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  399.2   0.0  1.7e-123  1.6e-119       1     342 []       5     352 ..       5     352 .. 0.98

  Alignments for each domain:
  == domain 1  score: 399.2 bits;  conditional E-value: 1.7e-123
                   CCCS-EEETTEEESSSEEE----S-TTTTTCS.HHHHHHHHHHHHHHTT-SEEEEEEEESSCCC-SCTTSEE-SSGGGHHHHHHHHHHHHHTT-EEE CS
  Oxidored_FMN   1 kLFkPikignmtLknRivmapmtrlraldkgnvledlaaeyysqraeipvtliiteaafvnpksggfdnapgiwdeeqieewrklteavhengskvv 97 
                   kLF+ i++gnm L++Riv+apmtrlra+d+g v+e l+ eyy+qr+ ip++lii++a+fv++ksgg++n+p++++ee++++w+++t a+h n+s+++
    EPX72715.1   5 KLFEAIQVGNMILRHRIVHAPMTRLRATDDGFVTE-LMTEYYAQRSCIPGSLIISDATFVGEKSGGYPNNPRCFTEEHARAWTPVTRAIHRNKSYLF 100
                   79*****************************7777.************************************************************* PP

                   EEEE--GGGS..SCSTCEC.........SS.ESSSSSTTT-.....S...CS.-EE--HHHHHHHHHHHHHHHHHHHH.TT-SEEEEEE-CTSHHHH CS
  Oxidored_FMN  98 vqlwhlGreakseyladqe.......vdspsdpvaldaqee....esaeevy.kkeltkeeikqliqefveAAkraie.AgfDgVeihganGYLlnq 181
                   +qlw l++e k ey++d +        d+p+dp +l+a  e    +++ + y kk+++k++i+++i++fv+AA +a + A++DgVe h+anG+Ll++
    EPX72715.1 101 MQLWPLPGEIKNEYREDVKklkeiayNDCPMDPLGLPAGVEsfdtVQGINIYqKKYVSKKDIQEYIDDFVNAAFLATNvAKADGVELHQANGFLLDR 197
                   *****************9999****99************99999999999999******************************************** PP

                   HH-TTT----STTS.SSHHHHHHHHHHHHHHHHHHH-SSSEEEEEECE--STTS--HHHHHHHHHHHCHCCEEEEEEETT-SSSSSTTS-TTTTHHH CS
  Oxidored_FMN 182 FlspksnkrtDeyg.GslenRarFllevvdaVkeavgeervgyRlSpedvvekgldfaetaqkivllkelekrlkdgkklalvhaaeprkrgagsvr 277
                   F+  ++++ +D+++ GslenR+rF+lev++aV++ +g+ervgyR++p++ + +++d+ et  + +llke+ kr++   kla++ha+epr++++g++r
    EPX72715.1 198 FVLGGFGNECDPEYrGSLENRCRFALEVLEAVTQEIGQERVGYRIAPYSAWAEQIDSKET--HTYLLKEISKRFP---KLAYIHAIEPRQYWSGHMR 289
                   ************************************************************..*************...******************* PP

                   CCTTHHHHHHCCCHSSEEEE-SS--SHHHHHHHHHTTS-SEEEESTHHHH-TTHHHHHHCCTCGG CS
  Oxidored_FMN 278 teqekntefvkevwkkplitvgriadeekaaeivaegeadLvamgRefladpdlveklkkglpln 342
                   +++e nt  ++++wk+p+it+g+++ +   a+ +a+++ +Lva+gR+ la+pdlv +++++lpln
    EPX72715.1 290 IKSEVNTYYLQQYWKGPFITAGGYTPQA--AVEAANERDTLVAFGRQYLANPDLVYRVEHNLPLN 352
                   *************************998..********************************987 PP

>> DUF5496  Family of unknown function (DUF5496)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   1.4e-05      0.13      19      53 ..     137     171 ..     131     181 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.4e-05
     DUF5496  19 pselevpgpeqpitiygkkyythkmtreyfdnkis 53 
                 p+ +e     q i iy kky ++k  +ey+d+ + 
  EPX72715.1 137 PAGVESFDTVQGINIYQKKYVSKKDIQEYIDDFVN 171
                 66777778889********************8765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (383 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       473  (0.0263818); expected 358.6 (0.02)
Passed bias filter:                      431  (0.0240393); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 2652.38
//
Query:       EPX72716.1  [L=443]
Description: alcohol dehydrogenase Adh4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.8e-123  412.0   0.3   2.3e-123  411.6   0.3    1.1  1  Fe-ADH    Iron-containing alcohol dehydrogenase
    3.7e-21   76.0   0.8    2.6e-10   40.4   0.0    2.2  2  Fe-ADH_2  Iron-containing alcohol dehydrogenase


Domain annotation for each model (and alignments):
>> Fe-ADH  Iron-containing alcohol dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  411.6   0.3  2.5e-127  2.3e-123       1     364 []      73     435 ..      73     435 .. 0.97

  Alignments for each domain:
  == domain 1  score: 411.6 bits;  conditional E-value: 2.5e-127
                 -SEEEEETTGGGGHHHHHTTT-..EEEEEEEHHHH.HH.THHHHHHHHHCTT-EEEE.EEE-S---HHHHHHHHTTS-TT.--EEEEEESHHHHHHHHH CS
      Fe-ADH   1 PtrivfgkgaleelgellkklgakralivtdkgslkksglldkvlesleeagievtvfdgvepnptleeveeaaalareegadvviavGGGsviDtAKa 99 
                 P+  +fgkg+l e ++ +k  g+k++livtd+g++ k gl d+v++ lee g +v++++gv+pnpt+++v ++++l++e+g+d ++++GGGs++D+AK+
  EPX72716.1  73 PSFNLFGKGSLVEGANQIKLSGYKKILIVTDPGII-KIGLCDRVKTLLEERGSTVHIYNGVQPNPTVTNVTDGLKLIKEFGCDSIVSIGGGSAHDCAKG 170
                 56678****************************99.*************************************************************** PP

                 HHHHTT...................--EEEEESS-S-S-TT-SEEEEE.-TTSEEEEE-..SS--SEEEEEHHHHHHS-HHHHHHHHHHHHHHHHHHHH CS
      Fe-ADH 100 ialllanpe.vedylgegkakkkkalpliaiPTtaGtGsevtplavitdeeegeklsifdpellPdlaivDpeltltlPkrvtaatglDalahalEayv 197
                 iall++n++ ++dy+g++k+  k++lpl+ i TtaGt+se+t++a+it e ++ k++i d++++P l+i Dpe +++lP+++taatg+Dal+ha+Eayv
  EPX72716.1 171 IALLATNGGkIADYEGVDKS-LKPQLPLVSINTTAGTASEMTRFAIITEETRHIKMAIIDKHTMPILSINDPETMYGLPPALTAATGMDALTHAVEAYV 268
                 *******956*****99987.9999***********************99999********************************************** PP

                 HHT---TTSSB--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---HHHHHHHHHHC.CGGGGGS-HHHHHHHHH............HH CS
      Fe-ADH 198 skkanplsdalaleairliaknleravadgedleareqmllastlaglafsnaglgavHalahalgalfgiphglanaillpavlrfnaeaa.p.erla 294
                 s+ anp++da+al++++l+ ++l+rav++g+d +ar+qm++a++l+g+af+na+lg vHa+ah+lg++++iphg++na+llp+v  fn ++a + +rl 
  EPX72716.1 269 STAANPITDACALKCVELVGQYLKRAVDNGRDEKARKQMAYAQFLGGMAFNNASLGYVHAMAHQLGGFYNIPHGICNAVLLPHVQLFNSKDArAaSRLG 367
                 *******************************************************************99********************87766799** PP

                 HHHHT.......T--HHHHHHHHHHHHHTT---SHHHHT-TT-HHHHHHHHHT-TSGGGGSSS---HHHH CS
      Fe-ADH 295 qlaralggesdeeaaeeliealrellkelglptsLselgvdeedldklaeaalkdrslannpreltaedv 364
                 ++a  lg   +e  a+++i+++r+l+++lg++  L++lgv e+d++ l+++a++d + a+np ++t ++v
  EPX72716.1 368 DVALQLGC--KEHTAQAAIKKIRDLNEQLGIKPYLKSLGVFEKDFELLSKNAMNDACGATNPIQPTLDEV 435
                 ****9976..5899*************************9999***********************9886 PP

>> Fe-ADH_2  Iron-containing alcohol dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.4   0.0   2.9e-14   2.6e-10       7      96 ..      83     173 ..      78     177 .. 0.91
   2 !   34.6   0.4   1.7e-12   1.5e-08      80     246 ..     174     342 ..     172     344 .. 0.92

  Alignments for each domain:
  == domain 1  score: 40.4 bits;  conditional E-value: 2.9e-14
    Fe-ADH_2   7 leklgellkelelkkvllvadentkka.agekveeslkeagikvevveeveeeadleeveklvealreketdlvvavGgGtiiDiakyvsa 96 
                 l + ++ +k  ++kk+l+v+d ++ k+ + ++v+  l+e+g++v++++ v++++++++v + ++ ++e ++d +v++GgG+++D ak ++ 
  EPX72716.1  83 LVEGANQIKLSGYKKILIVTDPGIIKIgLCDRVKTLLEERGSTVHIYNGVQPNPTVTNVTDGLKLIKEFGCDSIVSIGGGSAHDCAKGIAL 173
                 5555666777889**********9999899*********************************************************9986 PP

  == domain 2  score: 34.6 bits;  conditional E-value: 1.7e-12
    Fe-ADH_2  80 vavGgGtiiDiaky.vsaklnvpyvsvpTaaSvDGfaspgaslvvd..gkkrtv.akaaaPlaviaDldvlaeAPrrllasGvGDllgkytaladwkla 174
                 +a  gG+i D+  +  s k ++p+vs+ T+a   +    +a ++++  + k  +  k ++P+  i D + +   P +l+a+   D+l   +  + + +a
  EPX72716.1 174 LATNGGKIADYEGVdKSLKPQLPLVSINTTAGTASEMTRFAIITEEtrHIKMAIiDKHTMPILSINDPETMYGLPPALTAATGMDALTHAVEAYVSTAA 272
                 66778999998776468999***********9999999999999887788888888999**************************************** PP

    Fe-ADH_2 175 nevseplaklsaamvqeaaeklvedkketealeellealalsgigisrpaSGsEHliSHaldmlalkqalHG 246
                 n +++  a++ ++ v + ++++v+++++++a ++++ a  l+g+++ ++  G  H ++H l   +  +  HG
  EPX72716.1 273 NPITDACALKCVELVGQYLKRAVDNGRDEKARKQMAYAQFLGGMAFNNASLGYVHAMAHQLGGFY--NIPHG 342
                 ************************************************************98777..66666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (443 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       366  (0.0204139); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 2922.19
//
Query:       EPX72717.1  [L=260]
Description: pantoate-beta-alanine ligase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.1e-90  302.5   0.0    2.4e-90  302.4   0.0    1.0  1  Pantoate_ligase  Pantoate-beta-alanine ligase
      0.009   15.9   0.1       0.05   13.5   0.0    1.9  2  FAD_syn          FAD synthetase
     0.0095   16.1   0.0      0.019   15.2   0.0    1.5  1  CTP_transf_like  Cytidylyltransferase-like


Domain annotation for each model (and alignments):
>> Pantoate_ligase  Pantoate-beta-alanine ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  302.4   0.0     4e-94   2.4e-90      29     265 ..       1     249 [.       1     250 [. 0.91

  Alignments for each domain:
  == domain 1  score: 302.4 bits;  conditional E-value: 4e-94
                      -SS-GHHHHHHHHHHHHHSSEEEEEEEEEGGGSSTTSCTTTSEEEHHHHHHHHHHTT-SEEE---HHHHST......EEEEECSGGCSTHHHHS CS
  Pantoate_ligase  29 mGaLHeGHlsLvkaakeendvvvvSiFvNplqFgpkedlekYPrtleaDlelleeagvdlvFaPsveemyp......ttvevkelsevlegasr 116
                      mG+LHeGHl+Lvk+ake  ++vvvSiFvNp+qF++++dl++YP+tle+D e+l+ ++vdlvF+P+v+e+yp      t ve+++lse+legasr
       EPX72717.1   1 MGNLHEGHLTLVKKAKEYGTKVVVSIFVNPMQFNNQNDLNAYPQTLEEDNEKLKGLNVDLVFTPTVQELYPtgstgiTFVETPKLSEMLEGASR 94 
                      9***************************************************************************999*************** PP

                      TTHHHHHHHHHHHHHHHHT-SEEEEEGGGHHHHHHHHHHHHHTT-SSEEEEEEEEBETTSEBTTGGGGGS-HHHHHHTTHHHHHHHHHH..... CS
  Pantoate_ligase 117 pghFrGVatvvtkLfnivqpdrayfGqKDaqqlavirrlvkdlnlpveivavpivReedgLAlSSRNkyLseeerkaAlvlykaLkaak..... 205
                      pghFrGV+tvv+kLf+iv+pd+a+fG+KD+qqla++r++v+dl++ +ei++vp+vR+e+gLAlSSRN yL++e+ + A++ly++L  +      
       EPX72717.1  95 PGHFRGVTTVVSKLFHIVEPDVACFGEKDFQQLAILRKMVHDLDFGIEIIGVPTVRNENGLALSSRNGYLTQEQLEVAPNLYEVLFGVVrkidq 188
                      **************************************************************************************99854444 PP

                      ...BHHHHHHHHHHHHHTHTTEEEEEEEEEETTTSS..BSSB.SEEEEEEEEEETTEEEEEEE CS
  Pantoate_ligase 206 ...eaealkeaakeeleeeelekadyveivdaetleeleleeekkavllvaakvgkvrLiDni 265
                         + ++l + +++el++ ++   d +ei+da+tle+++ +++k++vll+aa++gk+rLiDni
       EPX72717.1 189 ghrDFATLLQVCDSELRKFGFI-PDQIEIRDADTLESCN-HDTKRMVLLAAAWLGKARLIDNI 249
                      4333333334455555544443.5***********9965.45588*****************8 PP

>> FAD_syn  FAD synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.0   8.3e-06      0.05      18      82 ..       4      63 ..       2      83 .. 0.85
   2 ?   -0.0   0.0      0.12   7.2e+02     110     145 ..     110     145 ..      92     160 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 8.3e-06
     FAD_syn 18 vHlGHqallkkaveaakekglpsvvvtFephPrevlakekaparLttleeklelleelgvdavlv 82
                +H GH +l+kka+    e g+++vv +F + P+++ ++++ +a   tlee  e+l+ l+vd v+ 
  EPX72717.1  4 LHEGHLTLVKKAK----EYGTKVVVSIFVN-PMQFNNQNDLNAYPQTLEEDNEKLKGLNVDLVFT 63
                6999999987765....5679999999987.9**999888888899999999999*****99875 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.12
     FAD_syn 110 avvvGfdfrfGkkregdvellkelgaklgfevevvp 145
                 ++v  +  +fG+k   + + l+++ + l+f +e++ 
  EPX72717.1 110 HIVEPDVACFGEKDFQQLAILRKMVHDLDFGIEIIG 145
                 555555678999999999999999999998877754 PP

>> CTP_transf_like  Cytidylyltransferase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   3.1e-06     0.019       9      46 ..       4      40 ..       3      83 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 3.1e-06
                     --HHHHHHHHHHHHHSSESEEEEEESSTHCSST-SCSS CS
  CTP_transf_like  9 iHlGHlrlleqakklleedlivgvpsdeppkkkkkpla 46
                     +H GHl+l+++ak+++ + ++v +  ++   +++ +l 
       EPX72717.1  4 LHEGHLTLVKKAKEYGTK-VVVSIFVNPMQFNNQNDLN 40
                     7*****************.9999988888888864444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       486  (0.0271069); expected 358.6 (0.02)
Passed bias filter:                      463  (0.0258241); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1837.13
//
Query:       EPX72718.1  [L=266]
Description: 3-methyl-2-oxobutanoatehydroxymethyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   7.6e-102  340.1   0.1   8.7e-102  339.9   0.1    1.0  1  Pantoate_transf  Ketopantoate hydroxymethyltransferase
  ------ inclusion threshold ------
      0.018   14.9   0.0      0.049   13.5   0.0    1.7  2  Asp_Glu_race     Asp/Glu/Hydantoin racemase


Domain annotation for each model (and alignments):
>> Pantoate_transf  Ketopantoate hydroxymethyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  339.9   0.1  9.7e-106  8.7e-102       2     258 ..       6     261 ..       5     262 .. 0.98

  Alignments for each domain:
  == domain 1  score: 339.9 bits;  conditional E-value: 9.7e-106
  Pantoate_transf   2 vtvkdlrkmkeegekiamlTaydattAklvdeagvdviLVGDslgmvvlgyestlpvtleemiyhtkaVargakralvvadlPfgsyeaskeqa 95 
                      vt++ lr++k ++ek+a++Tayda++++l++e+g+ v+LVGDslgm ++g++st+pv++ +++yht++V+rga+++l++ad+Pf+sy +++++a
       EPX72718.1   6 VTTSVLRQWKLAKEKFACITAYDASFSRLFEEQGMPVMLVGDSLGMAAQGHTSTIPVSISDIAYHTRSVRRGAPNSLIMADMPFMSY-SNTDDA 98 
                      78999**********************************************************************************.999*** PP

  Pantoate_transf  96 lenAarllkeggadavKleggae.vaetvkalveagipVmgHiGltPqsvnalggykvqgkteeeaeklledakaleeaGafalvlEavpaela 188
                      ++nAa+l+++ ga++vK+eg  + v et+++l+++ +pV gHiG+tPq+vn +gg+kvqg++e++a+k+le ak+leeaGa+++vlE++p++l+
       EPX72718.1  99 CKNAASLMRS-GANIVKVEGSGSwVYETIRKLTQRSVPVSGHIGMTPQAVNIYGGFKVQGRNETAASKILEAAKQLEEAGAQSMVLECIPEALG 191
                      *********9.********97655********************************************************************** PP

  Pantoate_transf 189 keiteklsiptIGIGAGaacdGqvlvlhDllgltekfkpkfvkkyaelaesieeavkaYaeevkegsFPa 258
                      ++i+e++siptIGIGAG+++dGq+lv+hD+lg+++ ++p+f+k++++ a +i++av+ Y++evkeg +Pa
       EPX72718.1 192 QKISESVSIPTIGIGAGKYTDGQILVMHDALGISSGRVPRFAKNFLSGAGDIRAAVRLYMQEVKEGLYPA 261
                      *********************************************************************8 PP

>> Asp_Glu_race  Asp/Glu/Hydantoin racemase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.32   2.9e+03      60      96 ..     100     137 ..      75     152 .. 0.70
   2 ?   13.5   0.0   5.5e-06     0.049      52      98 ..     160     205 ..     118     208 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.32
                   HHHHHHHCTTESEEEE--CHHHHHHHHHH..HH-SSEEE CS
  Asp_Glu_race  60 eaakkLekagadaiviaCnTahavadelq..kkikiPvl 96 
                   ++a++L ++ga ++ + +     v++ ++   + ++Pv 
    EPX72718.1 100 KNAASLMRSGANIVKVEGSGS-WVYETIRklTQRSVPVS 137
                   566777778888887777777.77888886666677753 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 5.5e-06
                   ..THH.HHHHHHHHHHCTTESEEEE--CHHHHHHHHHHHH-SSEEEEC CS
  Asp_Glu_race  52 ddpvl.klleaakkLekagadaiviaCnTahavadelqkkikiPvlgi 98 
                   + +++ k+leaak+Le+aga+  v+ C    a+ +++++ ++iP +gi
    EPX72718.1 160 E-TAAsKILEAAKQLEEAGAQSMVLECIPE-ALGQKISESVSIPTIGI 205
                   3.3455**********************99.99999*********997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       593  (0.0330749); expected 358.6 (0.02)
Passed bias filter:                      542  (0.0302304); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 1746.62
//
Query:       EPX72719.1  [L=356]
Description: acetylglucosaminyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.7e-05   24.6   0.8    7.7e-05   22.4   0.8    1.9  1  Glyco_transf_8   Glycosyl transferase family 8
  ------ inclusion threshold ------
      0.073   12.4   0.1       0.13   11.6   0.1    1.4  1  Mannosyl_trans3  Mannosyltransferase putative
       0.22    9.7   0.1        0.3    9.2   0.1    1.1  1  Virul_Fac        Putative bacterial virulence factor


Domain annotation for each model (and alignments):
>> Glyco_transf_8  Glycosyl transferase family 8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.8   1.3e-08   7.7e-05      40     220 ..     100     305 ..      31     314 .. 0.72

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 1.3e-08
  Glyco_transf_8  40 aeievenleklnklassykevlellesdkksledfesklklrspkylsllnylRlylpelfpkldkilylDaDvvvqgdlseLwdldlkgkvlaa 134
                      + ++ ++++l++ + s+  v+++ +sd          + ++       +++ +l++++   ++dk+  +D+D+++ +++++++d++++gk    
      EPX72719.1 100 RGTDEWKIRRLEADGASILLVDPISPSDMVLDL----DSMANDITDRFQHMFTKLRIFQQ-TQFDKLCVVDSDILPLKNIDDIFDTPFQGKPPNP 189
                     444445556666666666666666666553322....234444445556899********.****************************776555 PP

  Glyco_transf_8 135 ved...............................krfkkylnksepliaenfkpeacyFnaGvllfdldewrkenitetlikwlnlnekrtllkl 198
                     +                                  ++   ++++ ++   +  +++ yFnaG++l+ +   + e + +   +  + + +      
      EPX72719.1 190 IPSdqhryrnpndgmshffledfqdynatiddfyPYLLAATYDRGEHHLIPP-EPTGYFNAGLMLIRPSLFHFERLLKIGAYPYKYDHA----RM 279
                     5555************************999887555555555555555555.5589**************987777766666555555....89 PP

  Glyco_transf_8 199 gdqdilnivfkgk....vkeldkkyn 220
                     ++q +ln +f ++    + ++d+ yn
      EPX72719.1 280 MEQSLLNVAFGEHgwfpWTPVDPFYN 305
                     99999999998654444777888777 PP

>> Mannosyl_trans3  Mannosyltransferase putative
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   2.2e-05      0.13      27     115 ..      89     180 ..      72     183 .. 0.65

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2.2e-05
  Mannosyl_trans3  27 gnkLPIeivikkeelekefcekilpaa.......eepkqevwfvnakcvlnedylgkefkgfqnKalAllfssFeevllLDaDnvplknpdklF 113
                      ++k+PI i++ +   ++  ++++++         +  +++ +++++ + + +d+ ++ f+++  K+     + F++  ++D+D +plkn+d++F
       EPX72719.1  89 KSKYPIHIMVLR-GTDEWKIRRLEA-DgasillvDPISPSDMVLDLDS-MANDITDR-FQHMFTKLRIFQQTQFDKLCVVDSDILPLKNIDDIF 178
                      677888887773.333333333333.1234555544444444555555.22333333.667777777777899********************* PP

  Mannosyl_trans3 114 es 115
                      ++
       EPX72719.1 179 DT 180
                      97 PP

>> Virul_Fac  Putative bacterial virulence factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.1   5.1e-05       0.3     445     487 ..     273     315 ..     259     323 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 5.1e-05
   Virul_Fac 445 kekwegrlkaslle.rFgkddwleeWadgkpFdNvflvRkPnfk 487
                 k    +++++sll+ +Fg++ w+  W++  pF N ++   P++ 
  EPX72719.1 273 KYDHARMMEQSLLNvAFGEHGWF-PWTPVDPFYNGVWCSPPEYR 315
                 455689******9846******8.6************9999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       337  (0.0187964); expected 358.6 (0.02)
Passed bias filter:                      315  (0.0175693); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.30s 00:00:00.89 Elapsed: 00:00:00.51
# Mc/sec: 2099.09
//
Query:       EPX72720.1  [L=291]
Description: hypothetical protein SOCG_00482 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (291 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       650  (0.0362541); expected 358.6 (0.02)
Passed bias filter:                      580  (0.0323498); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.61u 0.31s 00:00:00.92 Elapsed: 00:00:00.51
# Mc/sec: 1715.14
//
Query:       EPX72721.1  [L=456]
Description: hypothetical protein SOCG_00483 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        1.8    9.0   4.9       0.74   10.2   1.0    2.4  2  DUF2663   Protein of unknown function (DUF2663)


Domain annotation for each model (and alignments):
>> DUF2663  Protein of unknown function (DUF2663)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.2      0.18   3.3e+03      25      66 ..     310     350 ..     293     366 .. 0.44
   2 ?   10.2   1.0   4.1e-05      0.74      13      78 ..     369     436 ..     359     441 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.18
     DUF2663  25 lallvlllfliyvlik.....ssslssllsallessvlllllllval 66 
                 l+++++ l++            s+++s+l+++ +  ++l+++ ++++
  EPX72721.1 310 LFIFFAPLMF-----PvldfkDSAIASVLQFAWK-LFNLYYIPFLLT 350
                 2222222222.....1333435555666555443.344444433333 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 4.1e-05
     DUF2663  13 eklekrllllsllallvlllfliyvlik..ssslssllsallessvlllllllvallyvavkl.lkkKa 78 
                 +++ k ++++sl++l +++  +iyv      ++  ++l+++++ ++++ +l   +++y  + + +k+K+
  EPX72721.1 369 DQYTKAKRFVSLVFLSIFVSIVIYVHYApfYNTSREVLKCIVG-TLFFQILAYCFSSYNNSGYgYKEKH 436
                 899**********************544955555677777776.5677778888888877765366665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (456 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       626  (0.0349155); expected 358.6 (0.02)
Passed bias filter:                      290  (0.0161749); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.28s 00:00:00.92 Elapsed: 00:00:00.51
# Mc/sec: 2710.40
//
Query:       EPX72722.1  [L=1101]
Description: ubiquitin-protein ligase E3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.7e-76  254.9   0.0    2.9e-75  253.2   0.0    1.9  2  SNF2_N         SNF2 family N-terminal domain
    2.2e-16   60.2   0.0    5.2e-16   59.0   0.0    1.7  1  Helicase_C     Helicase conserved C-terminal domain
    6.4e-13   48.5   0.0    1.7e-12   47.1   0.0    1.7  1  HIRAN          HIRAN domain
    4.7e-05   23.4   0.0    0.00011   22.3   0.0    1.7  1  ResIII         Type III restriction enzyme, res subunit
    8.8e-05   21.8   0.1    0.00019   20.7   0.1    1.5  1  ERCC3_RAD25_C  ERCC3/RAD25/XPB C-terminal helicase
    0.00014   21.7  15.2     0.0003   20.6  15.2    1.5  1  zf-C3HC4_3     Zinc finger, C3HC4 type (RING finger)
      0.001   18.9  17.7      0.002   17.9  17.7    1.5  1  zf-C3HC4       Zinc finger, C3HC4 type (RING finger)
     0.0011   19.0  10.7     0.0011   19.0  10.7    1.9  1  zf-RING_UBOX   RING-type zinc-finger
  ------ inclusion threshold ------
      0.021   15.1  16.9      0.047   14.0  16.9    1.6  1  zf-RING_2      Ring finger domain
      0.024   14.8  15.9      0.052   13.7  15.9    1.6  1  zf-C3HC4_4     zinc finger of C3HC4-type, RING
      0.036   14.0  15.9      0.076   13.0  15.9    1.6  1  zf-RING_5      zinc-RING finger domain
      0.039   13.8   0.2      0.091   12.6   0.2    1.6  1  UBA_4          UBA-like domain
      0.075   12.9  11.1       0.16   11.8  11.1    1.6  1  zf-C3HC4_2     Zinc finger, C3HC4 type (RING finger)
        4.9    7.1  15.4         14    5.7  15.3    1.8  1  Prok-RING_4    Prokaryotic RING finger family 4


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.93   1.2e+03     216     239 ..     325     348 ..     325     355 .. 0.91
   2 !  253.2   0.0   2.3e-78   2.9e-75       1     349 [.     420     794 ..     420     795 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.93
                 SSS-HHHHHHHHHHH-TTTT--HH CS
                 xxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 216 iqnsledlygLlkfLreepfgekq 239
                 +qn+  +l  Ll+ +  ep++e+ 
  EPX72722.1 325 TQNKRDHLLRLLSWIALEPYTENS 348
                 79******************9964 PP

  == domain 2  score: 253.2 bits;  conditional E-value: 2.3e-78
                 HHHHHHHHH............................................................HHHHHTT--EEE---TTS--HHHHHHHHH. CS
                 xxxxxxxxxxxxxxxxx..xxxxxxxxxxx...................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N   1 yQkeavkwmlkReqnlq..dleaalrkllk...................tldgekiyvnpatgevveesaeakqsvrGGiLaDemGLGKTvqvlalila 78 
                 yQk+a+ wm +Re+ +   ++   l+ l++                     +    +vn +tg +  + ++  + +rGGiLaDemGLGKT+++lal++a
  EPX72722.1 420 YQKQALYWMCQREKGDAesETSSNLHPLWSqflfptdpglspedynftrDEQPHRFFVNLYTGDITLVFPSMTPYHRGGILADEMGLGKTIEMLALVHA 518
                 9************87651156678999999*****************75555567899****************************************7 PP

                 ..HHTTTS---..............S-EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH-----------------EEEE-HHHHHHHT...... CS
                 xxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  79 qrakeekdkek.......krkdtlagptLivvPaslldqWeneierhvsssalrvlvyggqkkmkkkntkvapklladydvvittYdvlsreaelqkkr 170
                  r+ +++ +++       ++  ++a+ tL+v+P+slldqW++e  +     + ++lvy g+   ++ n + ++++  + d vit+Y vl +e++     
  EPX72722.1 519 RRS-SDIVEKPvenypfsNNLPKAAKTTLVVAPMSLLDQWQSEAVKVSGANSFKILVYYGSD--TSINLQSLAATKSAPDLVITSYGVLLSESSNTSDT 614
                 775.34444346778888999999************************99999999999987..6677789999*******************99999* PP

                 TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHHHHHHH-TTTT--HHHHHHHTHHHHHHHH.HHHHHHHHTT-STTE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxx RF
      SNF2_N 171 svlkqvewkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledlygLlkfLreepfgekqtfdkllqrpieaqa.ekgrsrLlqllqrlm 268
                   l +v+w+rv+lDEgh +kn  sk+a+a+  +s++nrw++tGTPi n+l dly+++kfL++ep+++++ +++ ++ p+ea++  k  +   ++l++l+
  EPX72722.1 615 CGLFSVHWHRVILDEGHSIKNPSSKTAKACYAISAQNRWVITGTPIVNKLDDLYSIIKFLQIEPWCNYNYWRTFVSVPYEAKDiLKALNVVQSILEPLV 713
                 ********************************************************************************55514566667789***** PP

                 E---GGGT..--....S---EEEEEEEEE--HHHHHHHH....................HHHHHH-HHH-HHHHHHHHHHHHH---X CS
                 xxxxxxxx..xx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 269 lrrakkdv..ek....nlPpkteeiiflklskverksYnrllevlrkkalakllkrseaalkssskskekilelllelrqacnhpql 349
                 lrr+k+    +     +lP++t  +i+l++s+ er++Y          + ak+++++ +a+   +k+ + il+lll+lrqac+hp l
  EPX72722.1 714 LRRTKETKdiSGnpivSLPDRTIDTIYLDFSEAERRIYD------SLYVKAKSRVHESIATGTLFKNYTAILGLLLRLRQACCHPLL 794
                 ****9644334434448**********************......4455566777777777777766699**************976 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.0   0.0     4e-19   5.2e-16       4     111 .]     939    1047 ..     933    1047 .. 0.89

  Alignments for each domain:
  == domain 1  score: 59.0 bits;  conditional E-value: 4e-19
                  HHHHHHHHHTTTTSEEEEEESSHHHHHH.HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH.TTSSSEE.EESGGGTSSSTSTTESEEEESSSSSSH CS
  Helicase_C    4 eallellkleeeggkilifvntidrlek.vklllekkgikvavlhgelpqnereeileqfn.kgesdvL.iatdvaerGidipkvnlVinfdlprnv 97  
                  e++ + l ++ + +ki+if++++  l+   +++ ++  ik  +++g+++q++r  +leqf+ + e++vL i+ ++++ G++++++n+V ++d++++ 
  EPX72722.1  939 EYIQKVL-NNPSSDKIVIFSQFTGFLDYiGEIF-NTLRIKHSRFDGRMSQEQRSMSLEQFRnDPEINVLnISLKAGGLGLNLTCANHVLMMDPWWSW 1033
                  5666777.88899***********997655555.4448**********************9678899999*************************** PP

                  HHHHHHHTTSSSTT CS
  Helicase_C   98 tsyiqriGRtgRag 111 
                  +   q+i+R++R g
  EPX72722.1 1034 SVESQAIDRVYRLG 1047
                  ************76 PP

>> HIRAN  HIRAN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.1   0.0   1.3e-15   1.7e-12       1      95 [.     182     292 ..     182     293 .. 0.97

  Alignments for each domain:
  == domain 1  score: 47.1 bits;  conditional E-value: 1.3e-15
                 EEEEEEEEECGGGCCT..---TTEEEEEEE-T...................T-SS-TT-EEEEETTS-EEEEE-HHHHHHHHHHHHTTSSEEEEEESS- CS
       HIRAN   1 lgsfevsvvglsyysgtgylkpgtevilerep...................nnpadanavrvlnergfeiGrlprevakwlspLldsgfitfegvvvda 80 
                 +g+f v++ ++   sg++ l+ g++v+ler++                   +  + +n +r+ n +++eiG lp+e a++l +L+ ++ ++fe+ +++a
  EPX72722.1 182 IGCFGVEAYSVV--SGSNILQAGERVYLERQKaptktqyrssrkrsktnnsSGSTYTNSIRFFNADHKEIGKLPSENAQVLCTLMSQKLWSFEASCIYA 278
                 799********9..**********************************9999999******************************************** PP

                 TTTEEEEEEEEEEEG CS
       HIRAN  81 peknlkvgltvylsl 95 
                 ++  l +g +v l++
  EPX72722.1 279 DD-FLHLGSNVTLQI 292
                 **.999999999986 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   8.5e-08   0.00011       2     169 ..     415     659 ..     414     661 .. 0.83

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 8.5e-08
                 -EE-HHHHHHHHHHT................................................................TTSEEEEEESTTSTHHHHHH CS
      ResIII   2 lelreyQeeaienlleklks..........................................................krdkrglikmaTGtGKTlvaa 42 
                 l+lreyQ++a+  + +  k                                                             ++ g+++ + G GKT+ ++
  EPX72722.1 415 LDLREYQKQALYWMCQREKGdaesetssnlhplwsqflfptdpglspedynftrdeqphrffvnlytgditlvfpsmtPYHRGGILADEMGLGKTIEML 513
                 6799999999999996666588899999999999999999999999999999999999999999999999999999999999***************** PP

                 HHHHHH-S.....................-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--..........-SEEEEEHHHHHHTH.... CS
      ResIII  43 klierllkkgkee................kflflvprkslleqtleefkkflseaykeigkkvsgdkkka...kekdstnkkilvttiqsldadseeee 122
                 +l+ + +++   e                k+ ++v   sll+q+++e  k++  +  +i   + +d+ ++    +  ++  ++++t++  l ++s +++
  EPX72722.1 514 ALVHARRSSDIVEkpvenypfsnnlpkaaKTTLVVAPMSLLDQWQSEAVKVSGANSFKILVYYGSDTSINlqsLAATKSAPDLVITSYGVLLSES-SNT 611
                 ***99999988889***************999999999*******9988888887766444444444444554555889999************9.446 PP

                 ....HHHTTT-SEEEEETGGGTTS..TTTHHHHHT---SEEEEEESS- CS
      ResIII 123 eeseellrdrfdviiiDEaHrlgak.kswreilekfkeavllglTATp 169
                 +++  l + +   +i DE H ++   ++  ++  +++++ +  +T+Tp
  EPX72722.1 612 SDTCGLFSVHWHRVILDEGHSIKNPsSKTAKACYAISAQNRWVITGTP 659
                 66666677777799********99743555556666777666678888 PP

>> ERCC3_RAD25_C  ERCC3/RAD25/XPB C-terminal helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.1   1.5e-07   0.00019      57     154 ..     947    1049 ..     915    1080 .. 0.74

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 1.5e-07
  ERCC3_RAD25_C   57 ekrgDkiivfsDnvfaLkeyakklkkpyi.....yGetseaerlkilqkfkknpkvntifls.kvgDtsiDlPeanvliqisshfgsrrqeaqr 144 
                     +  +Dki++fs     L  +++ ++   i      G++s+++r+  l++f+++p++n++ +s k g   ++l  an ++ ++    s   e+q 
     EPX72722.1  947 NPSSDKIVIFSQFTGFLDYIGEIFNTLRIkhsrfDGRMSQEQRSMSLEQFRNDPEINVLNISlKAGGLGLNLTCANHVLMMDP-WWSWSVESQA 1039
                     2359********99999999887655444222227**************************9899***********9987765.4567778888 PP

  ERCC3_RAD25_C  145 lGriLrakkk 154 
                     + r+ r  ++
     EPX72722.1 1040 IDRVYRLGQE 1049
                     8888776555 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6  15.2   2.3e-07    0.0003       4      48 ..     848     899 ..     846     900 .. 0.89

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 2.3e-07
                 B-TTTSSS.BS-EEETTEEEEEE-HHHHHHHHH.......TT-B-TTT--B-- CS
  zf-C3HC4_3   4 eCviCler.prnvvllpCgHlvlCeeCaekllk.......rkkkCpiCrrpie 48 
                 eC+iC+++  +n v+l+C+H+ +C  C+++  +       + + C+ Cr+p e
  EPX72722.1 848 ECPICCSEpIQNPVVLKCKHV-CCRGCLKDHIEyqkkrdiSPPLCHTCRQPFE 899
                 8******955679********.*******999888889999999******976 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9  17.7   1.6e-06     0.002       1      41 []     849     894 ..     849     894 .. 0.84

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 1.6e-06
                 -TTT-S--SS-E.E-TTS--B-CHHHHHHHHC....TSSB-..-TTT CS
    zf-C3HC4   1 CpiCleeakepnelleCkHsfCskCirkilks....rkkvk..CPlC 41 
                 CpiC++e+ ++  +l+CkH +C+ C++ ++++    + + +  C++C
  EPX72722.1 849 CPICCSEPIQNPVVLKCKHVCCRGCLKDHIEYqkkrDIS-PplCHTC 894
                 **********999******************97753222.2468877 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0  10.7   8.5e-07    0.0011       1      33 [.     849     883 ..     849     889 .. 0.77

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 8.5e-07
  zf-RING_UBOX   1 CpICl.elftdPlvlpCGHtFCreClw.elsksle 33 
                   CpIC  e+ ++P+vl+C H+ Cr Cl+  +  +++
    EPX72722.1 849 CPICCsEPIQNPVVLKCKHVCCRGCLKdHIEYQKK 883
                   *****99*****557***********543333333 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0  16.9   3.7e-05     0.047       2      44 .]     848     895 ..     847     895 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 3.7e-05
   zf-RING_2   2 eCpICleelssadsvlllpCgHvfhreClerwlrssst.......CPlCr 44 
                 eCpIC++e    +++++l+C+Hv++r Cl+++++ +++       C +Cr
  EPX72722.1 848 ECPICCSEPI--QNPVVLKCKHVCCRGCLKDHIEYQKKrdispplCHTCR 895
                 9****85554..3444456************999999999******9998 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7  15.9   4.1e-05     0.052       1      42 []     849     891 ..     849     894 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 4.1e-05
  zf-C3HC4_4   1 CPiC.ldYLekPvsleCGhsfClsCisslqkepdgeqllCplC 42 
                 CPiC ++ +++Pv l+C h++C  C++   + +++ + + plC
  EPX72722.1 849 CPICcSEPIQNPVVLKCKHVCCRGCLKDHIEYQKKRDISPPLC 891
                 9*963789******************98777777766555555 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0  15.9   5.9e-05     0.076       1      44 []     848     896 ..     848     896 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 5.9e-05
   zf-RING_5   1 hCnkCfeklskeekfyltsCgHifCekClkkll.......ekeavCpiCrk 44 
                 +C++C+++    +++++++C+H++C  Clk           ++  C +Cr+
  EPX72722.1 848 ECPICCSEP--IQNPVVLKCKHVCCRGCLKDHIeyqkkrdISPPLCHTCRQ 896
                 6********..********************99998888777788888886 PP

>> UBA_4  UBA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.2   7.1e-05     0.091      23      39 ..      87     103 ..      84     105 .. 0.94

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 7.1e-05
       UBA_4  23 eannWdLerAislyFds 39 
                 ea+n+d+e+Ai+ ++d+
  EPX72722.1  87 EASNGDVETAINVFYDN 103
                 89**************7 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8  11.1   0.00012      0.16       1      34 [.     848     881 ..     848     891 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00012
  zf-C3HC4_2   1 kCpiCl.dmlkdpsvvtpCgHvfCqkCilrsLeek 34 
                 +CpiC  + +++p vv +C+Hv C+ C++  +e +
  EPX72722.1 848 ECPICCsEPIQNP-VVLKCKHVCCRGCLKDHIEYQ 881
                 6***872569**9.999**********99866644 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7  15.3     0.011        14       3      38 ..     852     893 ..     849     899 .. 0.79

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.011
  Prok-RING_4   3 lCgeqekkailepCgHlvCkeCfdsk.dls.....sCPlCqr 38 
                   C+e  +++++  C+H+ C+ C+++  +++     s PlC++
   EPX72722.1 852 CCSEPIQNPVVLKCKHVCCRGCLKDHiEYQkkrdiSPPLCHT 893
                  355557889999***********87767777789999***96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1101 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       556  (0.0310112); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.79u 0.31s 00:00:01.10 Elapsed: 00:00:00.50
# Mc/sec: 6629.51
//
Query:       EPX72723.1  [L=252]
Description: 40S ribosomal protein S3a [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.8e-86  288.9   1.9    2.1e-86  288.6   1.9    1.0  1  Ribosomal_S3Ae  Ribosomal S3Ae family
     0.0048   16.9   0.1       0.01   15.8   0.1    1.6  1  NEMO            NF-kappa-B essential modulator NEMO
  ------ inclusion threshold ------
      0.028   14.9   0.2      0.085   13.4   0.2    2.0  1  SUI1            Translation initiation factor SUI1


Domain annotation for each model (and alignments):
>> Ribosomal_S3Ae  Ribosomal S3Ae family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  288.6   1.9   3.6e-90   2.1e-86       3     202 .]      17     221 ..      15     221 .. 0.98

  Alignments for each domain:
  == domain 1  score: 288.6 bits;  conditional E-value: 3.6e-90
                     ----S-TCCSEEEEEEEB-TTSSSSEEEEEEEE--BSSSESHHSHTT-EEEEESHHHHTCSHTSSSEEEEEEEEEEESSEEEEEEEEEEE-HHHH CS
  Ribosomal_S3Ae   3 kkkvvDkfkkKeWydvkaPslfgkreiGktlvnrtqgtkiaseklkgrvvevslaDLtndekeqafrklklkieevqgknaltnFkgmeltrDkl 97 
                     kk++vD+f++K+Wy++kaP++f+ +++Gktlvnrt+g k+a+++lkgr++evslaDL++de e++frk++l++e+vqgkn+lt+F+g++lt+Dkl
      EPX72723.1  17 KKRAVDPFARKDWYEIKAPAFFEVKNVGKTLVNRTAGLKNANDALKGRCMEVSLADLQKDE-EHSFRKVRLRVEDVQGKNCLTSFNGLSLTSDKL 110
                     89**********************************************************8.778****************************** PP

                     HHH--SSB-EEEEEEEEEESSSEEEEEEEEEEE-ST.T.....B---HHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHTTTHHHHHHHHHHTTTS CS
  Ribosomal_S3Ae  98 rslvrkwsslIeaivdvktkDgyllrvfvvafTkkr.n.....sYakssqkkaIrkkmveilteeaseldlkelvkklipeslgkeiekeakkIy 186
                     rslvrkw+++Iea  +vkt+Dgyl rvfv++fT++r n     +Ya+ssq++aIr+km+++++++ ++++lkelv+kl+pe +g+ iek+++ Iy
      EPX72723.1 111 RSLVRKWQTTIEADQTVKTTDGYLCRVFVIGFTSRRaNqvkkaTYAQSSQIRAIRQKMFQVIQNQTASCSLKELVQKLMPEVIGRAIEKATHGIY 205
                     ************************************989******************************************************** PP

                     -EEEEEEEEEEEEE-S CS
  Ribosomal_S3Ae 187 plrnveirKvkvlkkP 202
                     pl+nv +rKvk+lk+P
      EPX72723.1 206 PLQNVLVRKVKILKSP 221
                     **************98 PP

>> NEMO  NF-kappa-B essential modulator NEMO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.1   1.7e-06      0.01      22      56 ..      54      88 ..      50     101 .. 0.89

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1.7e-06
        NEMO 22 lkqsNqalkeRlEeLsawqekqkeerefleeklre 56
                lk  N+alk+R+ e s    ++ ee  f + +lr 
  EPX72723.1 54 LKNANDALKGRCMEVSLADLQKDEEHSFRKVRLRV 88
                89***************************999984 PP

>> SUI1  Translation initiation factor SUI1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.2   1.4e-05     0.085       3      50 ..      82     129 ..      80     175 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1.4e-05
        SUI1   3 pkihirleqrggrKkvTtvsgleafgidlkklakelkkkfacsgsvvk 50 
                 +k+++r+e  +g+ ++T  +gl +   +l +l+++++++  +  +v  
  EPX72723.1  82 RKVRLRVEDVQGKNCLTSFNGLSLTSDKLRSLVRKWQTTIEADQTVKT 129
                 69**************************************99999843 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (252 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       935  (0.0521501); expected 358.6 (0.02)
Passed bias filter:                      553  (0.0308439); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.30s 00:00:00.81 Elapsed: 00:00:00.48
# Mc/sec: 1568.83
//
Query:       EPX72724.1  [L=759]
Description: GPI anchor biosynthesis protein Gpi7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.3e-13   51.3   6.4    6.8e-13   48.9   6.4    1.9  1  Phosphodiest  Type I phosphodiesterase / nucleotide pyrophosp
    0.00012   21.6   0.2      0.069   12.5   0.0    2.3  2  Sulfatase     Sulfatase


Domain annotation for each model (and alignments):
>> Phosphodiest  Type I phosphodiesterase / nucleotide pyrophosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.9   6.4   7.5e-17   6.8e-13       1     237 [.      48     262 ..      48     276 .. 0.81

  Alignments for each domain:
  == domain 1  score: 48.9 bits;  conditional E-value: 7.5e-17
                   EEEEEETT-BTTHHHHHGSTSHHHHHHHH...HSEEESEEE-SSS-SHHHHHHHHHHSS-HHHHS--SSSEEETTTTEEEEEETTTTGGGGGCTTS- CS
  Phosphodiest   1 vlvislDGlradlldrlaellpnlaaLak...egvsapnlrpvfPtlTfpnhaslvTGlyPgeHGivgNtfydrktgeyvvfvtededaprwwqgep 94 
                   v++i++D +r d  +  + ++p+l++++    +g+ +   ++  Pt+T+p + +l TG+ Pg   +  N             ++++++    ++g+ 
    EPX72724.1  48 VVFIVVDAFRSDFPFSGSSHMPFLQSIIFnttHGLGFS-SYARSPTVTMPRLKALTTGTVPGFLDVLLNI----------AESEATSS----LTGQD 129
                   799**********999778********99444555555.88889*****************965555544..........33333333....77788 PP

                   HHHHHHHTHTTCEE...EESE....TTTTSEBTTCT.SC.TBHHSBTCT.CSTTSCHHHHHHHHHHHHHHHCHTHSHHHHHCTSSESEEEEEECCCH CS
  Phosphodiest  95 iwdtaakarglkaa...alfw....pgsevdystyyylvsetppryleddfnakvpledkvdkavlqtwldaafakvvlekelekpdlllvyleetD 184
                    w +  k + +k a      w    p +  dy        +t ++y++d  + ++ + +++d+ +l++ +d+             +d l++++ ++D
    EPX72724.1 130 SWLHQLKTHDKKIAfygDDTWlklfPKAFTDYE-------GTTSFYVADYTEVDNNVTRHFDH-LLPSSFDTL-----------SWDTLILHYLGVD 207
                   888888887666663443334667788999998.......99****98877777899999998.777777755...........5************ PP

                   HHHHHH-TTSHHHHHHHHHHHHHHHHHHHHHHHT.TGTTTEE.EEEEES---EEE CS
  Phosphodiest 185 tvgHkfGpdspevedalrrvDkaigdLlealder.glsaetn.iilvSDHGmadv 237
                   ++gH +Gp sp +  +l++ D+ ++ L+ +l++  +l+++ + i+lv+DHGm+++
    EPX72724.1 208 HIGHFQGPSSPLMITKLKEMDDIVASLYHYLEKYdKLTNSHSmIFLVGDHGMNEL 262
                   *********************************988887766799*******987 PP

>> Sulfatase  Sulfatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.1   0.1   0.00036       3.2       3      65 ..      48     110 ..      46     138 .. 0.83
   2 !   12.5   0.0   7.6e-06     0.069     208     303 ..     177     316 ..     129     322 .. 0.60

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.00036
                 EEEEEESSE-TTGSGGGTTTSCSSHHHHHHH...HTSEEESSEE-SSSSHHHHHHHHHHSS-HHHH CS
   Sulfatase   3 vvliladdlgagdlglyggktattpnldrla...eeglrftnfysaaplcspsraalltgryphns 65 
                 vv+i++d +++ d+ + g + + +p+l+++    ++gl f+++  + +++ p + al tg  p   
  EPX72724.1  48 VVFIVVDAFRS-DFPFSGSS-H-MPFLQSIIfntTHGLGFSSYARSPTVTMPRLKALTTGTVPGFL 110
                 89*******77.66666664.3.9***9888889**********999*************877655 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 7.6e-06
                 H.....................................HHHHHHHHHHHHHHHHHHHHHHHHHHTTTGGGE..EEEEEESSSSCCCGHHTTSSSCTTCS CS
   Sulfatase 208 r.....................................qlleaylnsveyvDdligrvlaaLeenglldnt..lvvftSDhgasleesngplrggkgan 267
                 +                                      +       ++++Dd +++++++Le+  +l n   +++ ++Dhg   +e +++   + g++
  EPX72724.1 177 NnvtrhfdhllpssfdtlswdtlilhylgvdhighfqgPSSPLMITKLKEMDDIVASLYHYLEKYDKLTNShsMIFLVGDHGM--NELGNHGGSSVGET 273
                 145555555555555555555555555555555555555556667789****************99998854389999****8..44445555555556 PP

                 SSHHHHBEEEEEEETTTSHC.......EEECSEEEGGGHHHHH CS
   Sulfatase 268 ayeggtrvPllvwwpgekap.......rvseelvshiDlfpti 303
                 + + ++  P l  ++++  +        +  + v+++D++pt+
  EPX72724.1 274 TAALSMLFPSLNVSKKKYVHepspenpYQLMPMVEQVDIVPTL 316
                 6666666666666666666654443332333333366666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (759 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       815  (0.0454571); expected 358.6 (0.02)
Passed bias filter:                      468  (0.026103); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.28s 00:00:00.96 Elapsed: 00:00:00.44
# Mc/sec: 5234.39
//
Query:       EPX72725.1  [L=236]
Description: TRAPP complex subunit Trs33 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-33  115.0   0.0      3e-33  114.6   0.0    1.1  1  TRAPP     Transport protein particle (TRAPP) component


Domain annotation for each model (and alignments):
>> TRAPP  Transport protein particle (TRAPP) component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.6   0.0   1.7e-37     3e-33       1     145 [.      16     172 ..      16     173 .. 0.85

  Alignments for each domain:
  == domain 1  score: 114.6 bits;  conditional E-value: 1.7e-37
       TRAPP   1 fafllgelvsylqrdskdveeve..........krLekmGyrvGlrllelllarerpretdilevlkfickdlWkllfgkqidnlktnhrgeyvltdne 89 
                 f+fll+e+v+++ r s++ e             + Le++G++vG +l e +l+ +r+r t+ ++v+ f+c++lW ++f+kq dnlktn++g++v+tdn 
  EPX72725.1  16 FDFLLIEMVHLARRLSEQQETAVsndermekghNFLENIGFQVGRKLSE-RLLLTRNRITESIDVMRFLCRELWPIVFRKQLDNLKTNRKGTFVVTDNY 113
                 89**********99776544333688899999899**************.7777779****************************************** PP

       TRAPP  90 f.pltrfvelpke.ls.....ylaflcGiirGaLenlgfpakVta..helpsdelrgrttfeikv 145
                 f ++++++      ++     yl+f+ G irG+++++g+p++V a   +lp       ++f++++
  EPX72725.1 114 FfWFSKMTAATGTeMKeyttpYLYFPSGFIRGVMHAFGYPVQVIAqcPNLPM------CIFQVRF 172
                 *******53332232235568*******************999995455555......9999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (236 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       493  (0.0274974); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.28s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 1609.14
//
Query:       EPX72726.1  [L=87]
Description: TIM22 inner membrane protein import complex subunit Tim8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.3e-20   71.1   3.7    5.3e-20   70.8   3.7    1.1  1  zf-Tim10_DDP  Tim10/DDP family zinc finger


Domain annotation for each model (and alignments):
>> zf-Tim10_DDP  Tim10/DDP family zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.8   3.7     3e-24   5.3e-20       1      63 [.      22      83 ..      22      84 .. 0.96

  Alignments for each domain:
  == domain 1  score: 70.8 bits;  conditional E-value: 3e-24
  zf-Tim10_DDP  1 qqleqeqqvanaqelvnkltekCfkkCigkypgssLdsseesCldnCvdryldvsnlvskrlq 63
                  +++e eqq+ ++q+ ++++t +C+ kC+g+  g+++d+see+Cl+nCv+r+ld +  + k+l+
    EPX72726.1 22 KFIETEQQKVKLQQAIHQFTATCWPKCVGT-IGNKFDKSEEQCLQNCVERFLDCNFHIIKSLE 83
                  699*************************88.***************************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       883  (0.0492498); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.29s 00:00:00.69 Elapsed: 00:00:00.44
# Mc/sec: 596.80
//
Query:       EPX72727.1  [L=1018]
Description: glycine cleavage complex subunit P [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     7e-202  670.9   0.0   5.8e-189  628.4   0.0    2.5  3  GDC-P            Glycine cleavage system P-protein
    4.2e-05   22.7   0.1    0.00024   20.2   0.0    2.0  2  Aminotran_5      Aminotransferase class-V
     0.0024   17.2   0.0     0.0051   16.1   0.0    1.4  1  Beta_elim_lyase  Beta-eliminating lyase
  ------ inclusion threshold ------
      0.062   11.8   0.1       0.12   10.9   0.1    1.4  1  Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme


Domain annotation for each model (and alignments):
>> GDC-P  Glycine cleavage system P-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  628.4   0.0  1.3e-192  5.8e-189       1     430 []      54     495 ..      54     495 .. 0.99
   2 !   39.7   0.0   5.7e-14   2.6e-10      20     285 ..     514     797 ..     506     802 .. 0.79
   3 ?   -2.8   0.0      0.48   2.2e+03     333     364 ..     828     859 ..     825     869 .. 0.84

  Alignments for each domain:
  == domain 1  score: 628.4 bits;  conditional E-value: 1.3e-192
                 HHH-SS-HHHHHHHHHHHT-SSHHHHHHHHS-GGGB--S-------..............--HHHHHHHHHHHHTTB---EE--BTTB------HHHHH CS
       GDC-P   1 erhigpsekdqkemLetlGlkslddliekavPkeiklkkelkleap..............ksEeellaelekiasknkvvksfiGaGyydtilPaviqr 85 
                 +rhigps+ +q+++L+tlG+k++++++++ +P+++++k+++k + p              +sE+e+ +  e++a+knk+vk  iG+Gyy++++P+vi r
  EPX72727.1  54 RRHIGPSKDEQEYQLSTLGYKDFESFLNDVIPQNVRAKENNKKHFPsfdfdthkphtapnYSESEFGELAENVANKNKLVKTLIGMGYYNVKIPPVIIR 152
                 69************************************************************************************************* PP

                 HTTT-HHHHS--S-SSGGG-HHHHHHHHHHHHHHHHHHT-SEE-S-BS-HHHHHHHHHHHHHHH-SSS--EEEEETTS-HHHHHHHHHHHGGGT-EEEE CS
       GDC-P  86 nilenpewytaYtPYqaEisqGrLeallnfqtlvadltGldianasllDegtAaaEAvllaaraskkkakkvvvdkkvhpqtlevlktrakglgieive 184
                 n++enpewyt+YtPYqaEisqGrLe+++n+qt+++dltGl+i+nasllDe+tAa+EA+++++++++kk+k+++vd++++p+tl+vl+tra+g++i++ +
  EPX72727.1 153 NVFENPEWYTQYTPYQAEISQGRLESMMNYQTMITDLTGLSISNASLLDEATAASEAMVMIMANDRKKRKTFLVDSNIYPNTLSVLRTRARGFNIDVKV 251
                 *************************************************************************************************** PP

                 E-GGG--S-...S-EEEEEEEES-TTSB----HHHHHHHHHTT-EEEEEE-TTGGGTB--HHHHT-SEEEEE-TTTT---GGG----EEEEE-GGGGGG CS
       GDC-P 185 vdlteekvtdkekevagvlvqypnteGriedlkelvekakkkkslvvvaadllaLtllkpPgelgaDivvGsaqrfGvPlgyGGPhagffAvkeklkRk 283
                 vd+++e +t +ek+ +g+lvqyp+++G+i d++el+++a+ ++++vv+a+dllaLtl+k+Pge+gaD++vGs+qrfG+P+g+GGPhagffA+++++kRk
  EPX72727.1 252 VDISSEIITANEKDSFGILVQYPAADGSIFDYSELASAAHASNMHVVAATDLLALTLMKTPGEWGADVAVGSTQRFGLPMGFGGPHAGFFACNDEFKRK 350
                 *************************************************************************************************** PP

                 --S-EEEEEEBTTS-EEEEEE-CCGSHHCCHHHCS-S--S--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT.T-EE--SSBSSEEEEE CS
       GDC-P 284 iPGRlvGvskDaegkralrlalqtREqHirRdkAtsniCtaqaLlAnlaalyavyhGkeglkeiarrihkkteilakelkkkleeelkkkkffdtllie 382
                 +PGRlvG+skD+ g++a+rlalqtREqHirR+kAtsniCtaqaLlAn++a+ya+yhG+eglk+ia ri++ t+il+++l+++ ++  +k++ffdtl+i+
  EPX72727.1 351 LPGRLVGLSKDRLGNPAYRLALQTREQHIRREKATSNICTAQALLANMSAFYAIYHGPEGLKHIASRIYSLTNILKRALESAGYDISNKNHFFDTLTIN 449
                 *********************************************************************************99999999*********9 PP

                 --TTTHHHHHHHHHHTTEE-EEESTTEEEEE--TT--HHHHHHHHHHH CS
       GDC-P 383 veekaaekvlkkaekeglnlrkvelktvgialdEtvtkedieallkvl 430
                 v+   a+ +l++a++ g+nlrkv+++ v++++dE  t+ed+++l++++
  EPX72727.1 450 VQ--CADSILQRALAYGYNLRKVSDGVVSLSMDESITNEDLSHLFSIF 495
                 98..6669*************************************987 PP

  == domain 2  score: 39.7 bits;  conditional E-value: 5.7e-14
                 -SSHHHHHHHHS-GGGB--S-------....--HHHHHHHHHHHHTTB--.-EE--BTTB------HHHHHHTTT-HHHHS--S-SSGGG-HHHHHHHH CS
       GDC-P  20 lkslddliekavPkeiklkkelkleap....ksEeellaelekiasknkv.vksfiGaGyydtilPaviqrnilenpewytaYtPYqaEisqGrLeall 113
                 ++s+++l  +a Pke++ +++   +      +sE+el++ ++ + sk+   ++ +i  G   ++l av + n ++np++  +  PY +E      + l+
  EPX72727.1 514 ISSVEQLPVSAFPKELRRQTPYLQHVVfnryHSETELMRYIRYLQSKDLSlAHAMIPLGSCTMKLNAVSEMNPVSNPKFA-NIHPYAPEDQVHGYKYLI 611
                 578999999999****9887654433345569****************98799*************************96.578*****8766666666 PP

                 H.HHHHHHHHHT-SEE-S-BS-HHHHHHHHHHHHH.HH-SSS--EEEEETTS-HHHHH.HHHHHHGGGT-EEEEE-GGG--S-.............S-E CS
       GDC-P 114 n.fqtlvadltGldianasllDegtAaaEAvllaa.raskkkakkvvvdkkvhpqtle.vlktrakglgieivevdlteekvtd..........kekev 199
                 n    ++ +ltG+d   as+  ++ A++E + l++ ra +k   +   +  + p +++ +    a   g+++v v++ +++  d          +++++
  EPX72727.1 612 NdLGLMLKNLTGFDA--ASFQPNSGASGEYAGLSViRAYQKSIGEGHRNICLIPVSAHgTNPASAAMAGLKVVPVKCLNNGNLDfedlkakaekHSNHL 708
                 53788999*****96..6899999999998777641333333222222223333333203345677778888888888888777778888888778899 PP

                 EEEEEEES-TTSB---.-HHHHHHHHHTT-EEEE.EE-TTGGGTB--HHHHT-SEE.EEE-TTTT---GGG----EEEEE-GGGGGG-- CS
       GDC-P 200 agvlvqypnteGried.lkelvekakkkkslvvv.aadllaLtllkpPgelgaDiv.vGsaqrfGvPlgyGGPhagffAvkeklkRkiP 285
                 a+ +v yp+t+G  e+ +ke  + ++++   v    a++ a++ l   g+lgaD+  +   + f +P g GGP +g + vk++l+  +P
  EPX72727.1 709 AAFMVTYPSTFGIFEHgVKETLNVIHQNGGQVYFdGANMNAMVGLCKAGDLGADVChFNLHKTFCIPHGGGGPGVGPICVKSHLADFLP 797
                 ************9987799999****998887763689999999***********83667889*****************999887766 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 0.48
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       GDC-P 333 alyavyhGkeglkeiarrihkkteilakelkk 364
                   y+ + G +gl++ ++  + +++++a+ l  
  EPX72727.1 828 WAYMRMMGLDGLRDASKAALLNANYMAARLAP 859
                 579999********************998865 PP

>> Aminotran_5  Aminotransferase class-V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0     0.094   4.2e+02     151     209 ..     276     334 ..     233     433 .. 0.76
   2 !   20.2   0.0   5.4e-08   0.00024      78     221 ..     645     796 ..     635     817 .. 0.76

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.094
                  TTTEB--HHHHHHHHHHTT-EEEEE-TTTTTTS---HHHHTESEEEEETTTTTSSTT-E CS
  Aminotran_5 151 vtGtiqpveeigklakkkgalvlvDaaqavghipidvkklgvDflafsghKllgPtGiG 209
                  + G i++  e++++a+++++ v++     ++       ++g+D+++ s++ +  P G G
   EPX72727.1 276 ADGSIFDYSELASAAHASNMHVVAATDLLALTLMKTPGEWGADVAVGSTQRFGLPMGFG 334
                  67889999999999999766666433333444444556788888888888877777754 PP

  == domain 2  score: 20.2 bits;  conditional E-value: 5.4e-08
                  HHHCCCC.-TTTSEEEEETTSHGGGTHHHHHHHHHHTEEEEEEEBETTSCBEGGGHHHH--TTEEEEE.EE.SBETTTTE.B--HHHHHHHHHHTT-E CS
  Aminotran_5  78 alslars.lkpgdeivvteaehhanlvpwqelakrtgakvkvipldeegeldldelekllnektklva.it.hvsnvtGt.iqpveeigklakkkgal 171
                  ++++++s  +  ++i +  +  h++  p+ +++   g+kv+ ++  ++g+ld ++l+++ ++  + +a ++    ++ G+  + v+e  ++++++g  
   EPX72727.1 645 IRAYQKSiGEGHRNICLIPVSAHGTN-PASAAM--AGLKVVPVKCLNNGNLDFEDLKAKAEKHSNHLAaFMvTYPSTFGIfEHGVKETLNVIHQNGGQ 739
                  55565663334466777777788877.777776..7********************9999755554440331345889*97889************** PP

                  EEEE-TT.TTTTS---HHHHTESEEEEETTT.TTSS.....TT-EEEEEEHHHHHTS CS
  Aminotran_5 172 vlvDaaq.avghipidvkklgvDflafsghK.llgP.....tGiGvlyvrkellekl 221
                  v  D+a  +++    +  +lg+D+  f  hK ++ P     +G+G ++v+++l   l
   EPX72727.1 740 VYFDGANmNAMVGLCKAGDLGADVCHFNLHKtFCIPhggggPGVGPICVKSHLADFL 796
                  ******83577888999**************99988322234688888888777766 PP

>> Beta_elim_lyase  Beta-eliminating lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   1.1e-06    0.0051      25     205 ..     602     777 ..     597     779 .. 0.71

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.1e-06
                      -CCCT--HHHHHHHHHHHHHTT-SEEEEES.-HHHHHHHHHHHH--TTEEEEEETT........-HHHHSSTTHHHHCC--EEEEE-EBTTTBE CS
  Beta_elim_lyase  25 desYgedktvnrLedavaelfgkeaalfvp.qGtaAnsillkillqrgeevivtep........ahihfdetgaiaelagvklrdlknkeaGkm 109
                      d+++g    +n+L   +++l+g++aa f p +G  ++   l+++   ++++  +++        ah+   ++ a a++ag k++++k  ++G++
       EPX72727.1 602 DQVHGYKYLINDLGLMLKNLTGFDAASFQPnSGASGEYAGLSVIRAYQKSIGEGHRniclipvsAHG---TNPASAAMAGLKVVPVKCLNNGNL 692
                      8888999999999999************995588888888876664444444444444443343443...55677889*********9999*** PP

                      -HHHHHHHS--S-TTS-EEEEEEEESSBTTTTTB---HHHHHHHHHHHHHCT-EEEEEETTHHHHHHHHTS-CHHHHTTSSEEEEESSSTT--S CS
  Beta_elim_lyase 110 dlekleaaikevgaheekiklisltvTnntagGqvvsleelrevaaiakkygiplhlDgARfanaakslgeivkemfsyvDsvtmslkKdllan 203
                      d+e+l+a+ ++   h++  ++ ++t       G  +    ++e+ ++ +++g ++ +DgA  +na++   +++ ++  ++D++ + l K  +++
       EPX72727.1 693 DFEDLKAKAEK---HSNHLAAFMVTYPSTF--G--IFEHGVKETLNVIHQNGGQVYFDGAN-MNAMV-GLCKAGDL--GADVCHFNLHKTFCIP 775
                      *******9999...5566666666665554..4..46788999999************995.34442.23333333..4566666666666666 PP

                      S- CS
  Beta_elim_lyase 204 vG 205
                       G
       EPX72727.1 776 HG 777
                      55 PP

>> Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   2.6e-05      0.12      77     198 ..     204     326 ..     179     347 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 2.6e-05
                      HHHHHHHHHTTS-TTEE...EEEESTSSHHHHHHHHHTHHHTTCEEEEESTTSHHHHHHHCCTTEEEEEEESS-TTTT----HHHHHHHHHHTT CS
  Cys_Met_Meta_PP  77 maAiaaailallkaGde...ivvsddlYggtqrllkkvlkklgievkfvdtsdleelekaikentklvylEtptnpllkvvDiekiaklakkag 167
                      +aA++a+++ +++  ++    +v++++Y  t ++l++ ++ ++i+vk+vd s  +e+ +a ++    +++  p+    ++ D  ++a++a++ +
       EPX72727.1 204 TAASEAMVMIMANDRKKrktFLVDSNIYPNTLSVLRTRARGFNIDVKVVDIS--SEIITANEKDSFGILVQYPAA-DGSIFDYSELASAAHASN 294
                      566666666666553334449*****************************95..578888888888899999986.579*************** PP

                      -EEEEEGTTTHT.TTS-GGGGT-SEEEEETTT CS
  Cys_Met_Meta_PP 168 vlvvvDntfasp.llqrplklgaDivvhSaTK 198
                      + vv    +++  l+  p ++gaD+ v S+ +
       EPX72727.1 295 MHVVAATDLLALtLMKTPGEWGADVAVGSTQR 326
                      87777666665538888**********99866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1018 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       529  (0.0295053); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.75u 0.31s 00:00:01.06 Elapsed: 00:00:00.47
# Mc/sec: 6515.16
//
Query:       EPX72728.1  [L=239]
Description: 40S ribosomal protein S6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.7e-58  194.6   0.4    2.5e-57  192.3   0.0    2.0  2  Ribosomal_S6e  Ribosomal protein S6e


Domain annotation for each model (and alignments):
>> Ribosomal_S6e  Ribosomal protein S6e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  192.3   0.0   1.4e-61   2.5e-57       1     125 []       1     126 [.       1     126 [. 1.00
   2 ?    0.2   0.4     0.039   6.9e+02      71     118 ..     177     224 ..     160     230 .. 0.72

  Alignments for each domain:
  == domain 1  score: 192.3 bits;  conditional E-value: 1.4e-61
                    -EEEEEETTTTEEEEEE-.CHHHCTTCTT-BSSEEEECCTTTSSSTS-EEEEEEEEETTC-BB-TTS-SSSEEEEEEETTSSSS-SSSSS-EEEEE CS
  Ribosomal_S6e   1 mklnisdpatgkqkliev.dekklrtligkrigeevdgdalGeelkgyvlkitggsdkqGfpmkqgvltpgrvrlLlskggvgyrprrkGerkrks 95 
                    mklnis+pa+g+qklie+ d+++lr +++kr+g+ev +d++G+e++gyv+kitgg+dkqGfpm qgvl p+rvrlLl+ g+++yrprr+Gerkrks
     EPX72728.1   1 MKLNISYPANGTQKLIEIdDDRRLRVFMDKRMGQEVPADSVGPEFAGYVFKITGGNDKQGFPMFQGVLLPHRVRLLLRAGHPCYRPRRDGERKRKS 96 
                    9*********************************************************************************************** PP

                    EE-SB--SSEEEEEEEEEE--SS--TTTSS CS
  Ribosomal_S6e  96 vrGcivsadisqlnlvivkkgekdiegltd 125
                    vrGciv++d+++l+++ivk+ge+di+gltd
     EPX72728.1  97 VRGCIVNQDMAVLAVAIVKQGEQDIPGLTD 126
                    *****************************8 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.039
                    EEEEEEETTSSSS-SSSSS-EEEEEEE-SB--SSEEEEEEEEEE--SS CS
  Ribosomal_S6e  71 rvrlLlskggvgyrprrkGerkrksvrGcivsadisqlnlvivkkgek 118
                    +++ L++ ++   + +r   ++r+    ++ +a+++ql ++ v + ++
     EPX72728.1 177 KIQRLVTPRTLQHKRHRFALKRRQAENNREAAAEFAQLMAKRVAEQKQ 224
                    455555555666677777888888889999999999999987744333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1109  (0.0618551); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.22s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 1752.23
//
Query:       EPX72729.1  [L=472]
Description: spermidine family transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.1e-22   79.6  34.8    2.1e-22   79.6  34.8    1.9  2  MFS_1            Major Facilitator Superfamily
  ------ inclusion threshold ------
       0.13   12.5   2.5       0.43   10.8   2.0    2.3  1  Phage_holin_Dp1  Putative phage holin Dp-1


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.6  34.8   2.3e-26   2.1e-22      46     352 ..      80     420 ..      49     421 .. 0.73
   2 ?   -0.2   2.9     0.041   3.7e+02     138     174 ..     421     457 ..     417     469 .. 0.76

  Alignments for each domain:
  == domain 1  score: 79.6 bits;  conditional E-value: 2.3e-26
       MFS_1  46 avaslplGrlsdrfGrrr.vlllglllfalglllllfasslwlllvlrvlqGlgagalfpagaaliadwfpkeergraigllsagfslGailgpllggl 143
                 a++ ++++++s+  Gr+  v+l  +++++l+ +  + a ++ +++  r+++Gl+aga + + + ++ad++++ +r+ a+ ++s ++  Ga +gp++++l
  EPX72729.1  80 AFGPMVFAPFSEMNGRKIgVFLPFFISMLLT-AGTASADNVAAIMCTRFFSGLFAGAPIVSTGGVLADLWNPAQRATALVFYSFFVFTGADFGPIISSL 177
                 6777777888888899998888888888888.3334138888********************************************************* PP

       MFS_1 144 lasslg...Wravfyilaivsllafvlfllllpeepperkrkspkeee....................kgtgpaplvpawkallkdpvlwillialllf 219
                 l+  ++   Wr++ +++ iv  + +++ l+++ e++ +    + ++ +                    k    ++l+ ++ +l ++ v++i+l+a+++ 
  EPX72729.1 178 LT-RGSdtaWRWPLWFMVIVQSFILLVDLIVVDETYGPVILAKRARNLrlstknwglhaahdkykldaKEFITFHLLRPFAMLATPIVFFIALFASYVY 275
                 **.555678***********7666565445555555444444444444788877778887555444333333333333666666666665333333333 PP

       MFS_1 220 ffgfsglltllplylqevlglsglllaglllallalvgailallagrlsdr............lgrrrrlllallllllaalglallavtssavllllv 306
                 + +++++lt++p  +   +++ g ++++  ++++ ++g+i++ ++  l +r              ++ rl l+++l+ l+ +g++++a+ts++ +++++
  EPX72729.1 276 G-ILYIVLTTIPYTFYLSRNWQGTVSTL--PMIAIFLGVIIGGICNMLWNRkyakllltnkgdPLPEQRLPLMMILGWLMPAGIFVFAWTSDTNIHWIA 371
                 3.66668888888678999999767777..5555555555544555555444555777555554449***********************999999995 PP

       MFS_1 307 lvl....iGf.glgfvfpsllalasdlappeeagtasglfntagslggalg 352
                  ++    iG+ +l +++++l++l++ ++  + a++a++++++++s+ g  +
  EPX72729.1 372 PFIgiamIGIgFLIIFQGCLNYLVDTFT--KFAASAIAANTFTRSICGGTF 420
                 5555555999556666888888888888..***************988765 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.041
       MFS_1 138 pllggllasslgWravfyilaivsllafvlfllllpe 174
                 pl++ ++   lg ++   ++++++l ++ + +++++ 
  EPX72729.1 421 PLFARIMFKKLGVHWGGTLVGFIALGMIPIPFFFYFF 457
                 8899999999999999999999999998765565543 PP

>> Phage_holin_Dp1  Putative phage holin Dp-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   2.0   4.8e-05      0.43      32      58 ..     294     318 ..     267     323 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 4.8e-05
  Phage_holin_Dp1  32 nlpetelvVgtitaiatFLGvilg.vst 58 
                      n++ t   V t+  ia+FLGvi+g +++
       EPX72729.1 294 NWQGT---VSTLPMIAIFLGVIIGgICN 318
                      55555...*************9853776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (472 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       710  (0.0396006); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.46
# Mc/sec: 3094.26
//
Query:       EPX72730.1  [L=515]
Description: Cdc20/Fizzy family WD repeat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.5e-15   57.3   6.0     0.0099   16.7   0.1    6.8  6  WD40         WD domain, G-beta repeat
    1.2e-14   54.4   0.5     0.0016   18.7   1.0    5.3  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    8.1e-08   32.4   1.1      1e-05   25.5   0.7    3.0  3  eIF2A        Eukaryotic translation initiation factor eIF2A
     0.0053   15.8   0.1       0.24   10.3   0.0    2.9  3  Ge1_WD40     WD40 region of Ge1, enhancer of mRNA-decapping p


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   0.0   4.8e-05      0.22      12      37 ..     212     237 ..     201     237 .. 0.85
   2 !    7.4   0.0     0.002       8.8      10      38 .]     250     281 ..     244     281 .. 0.88
   3 !   16.7   0.1   2.2e-06    0.0099       8      38 .]     299     330 ..     293     330 .. 0.90
   4 !   10.6   0.1   0.00019      0.85       4      38 .]     338     375 ..     335     375 .. 0.70
   5 ?    0.8   0.0      0.24   1.1e+03      12      23 ..     390     401 ..     379     409 .. 0.77
   6 !    5.3   0.0    0.0089        40      20      38 .]     459     476 ..     435     476 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 4.8e-05
                 SEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  12 svtslafspdgawlasGsdDgtvriW 37 
                 +v+sla+s dg+ la G  Dgt+ +W
  EPX72730.1 212 DVSSLAYSYDGTILAVGRIDGTIQFW 237
                 699************999*******9 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.002
                 S.SSEEEEEEETTSSE..EEEE.ETTSEEEEEE CS
        WD40  10 H.ssvtslafspdgaw..lasG.sdDgtvriWd 38 
                 H ++v ++a+ p+ ++  ++ G + Dg + i+d
  EPX72730.1 250 HpGDVGCMAWKPSADMkrILIGkG-DGEIVIYD 281
                 8788************99667*88.******98 PP

  == domain 3  score: 16.7 bits;  conditional E-value: 2.2e-06
                 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 t+H   v+++a++ dg+ +a+G+ D++v ++d
  EPX72730.1 299 TAHeEQVCGIAWNYDGSQFATGGNDNKVCLFD 330
                 589777***********************998 PP

  == domain 4  score: 10.6 bits;  conditional E-value: 0.00019
                 EEEEESS.SSEEEEEEETTSSEEE.EE..ETTSEEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawla.sG..sdDgtvriWd 38 
                 + t+  H   v +++f+p ++ l+ +G  s D+++r+++
  EPX72730.1 338 VFTW-QHdAAVKAISFCPWQKSLLaTGagSHDKHIRFYN 375
                 5555.48555999998888888653544478******97 PP

  == domain 5  score: 0.8 bits;  conditional E-value: 0.24
                 SEEEEEEETTSS CS
        WD40  12 svtslafspdga 23 
                  +ts+ +sp+ +
  EPX72730.1 390 QITSIHWSPSYK 401
                 49*******976 PP

  == domain 6  score: 5.3 bits;  conditional E-value: 0.0089
                 TTSSEEEEEETTSEEEEEE CS
        WD40  20 pdgawlasGsdDgtvriWd 38 
                 p ++ +++Gs D tv+++d
  EPX72730.1 459 PGNNIVVAGS-DETVKFFD 476
                 55667899**.*****998 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.71   3.2e+03      36      60 ..     169     192 ..     160     198 .. 0.72
   2 !   16.7   0.0   1.4e-06    0.0065      40      90 ..     212     260 ..     205     262 .. 0.89
   3 !   18.7   1.0   3.7e-07    0.0016      41      87 ..     305     350 ..     257     399 .. 0.48
   4 ?    0.1   0.0      0.23     1e+03      50      74 ..     460     484 ..     456     493 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.71
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdg 60 
                   +d   + LaW+p g+ La++ +++
   EPX72730.1 169 RDDFYTTLLAWSPLGE-LAIGLAEN 192
                  5566667899***998.57776665 PP

  == domain 2  score: 16.7 bits;  conditional E-value: 1.4e-06
  ANAPC4_WD40  40 evrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                   v+sLa++ dg++Lav+  dg++++     g++   +++ +   v c+ W+
   EPX72730.1 212 DVSSLAYSYDGTILAVGRIDGTIQFWG--RGEIRPRITIYHPGDVGCMAWK 260
                  799*********************986..799999999999989*****97 PP

  == domain 3  score: 18.7 bits;  conditional E-value: 3.7e-07
  ANAPC4_WD40  41 vrsLaWkpdgklLavaysdgevrlldaes.gkvvhslsvksekavtcl 87 
                  v ++aW+ dg+ +a + +d++v l+d+++ +k v +++ ++   v+ +
   EPX72730.1 305 VCGIAWNYDGSQFATGGNDNKVCLFDSSNwEKPVFTWQHDAA--VKAI 350
                  555555555555555555555555555442333444433322..1111 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 0.23
  ANAPC4_WD40  50 gklLavaysdgevrlldaesgkvvh 74 
                  g+ ++va sd +v+++d ++    h
   EPX72730.1 460 GNNIVVAGSDETVKFFDLSENCSWH 484
                  78899***********988766555 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.25   1.1e+03     106     154 ..     216     262 ..     205     265 .. 0.64
   2 !    4.0   0.0     0.009        40      53      90 ..     245     282 ..     239     293 .. 0.86
   3 !   25.5   0.7   2.3e-09     1e-05      47     161 ..     290     407 ..     282     424 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.25
                 EEE-TTSSEEEEE-TTSSS-EEEEEETTTTE.EEEEEE-TT--EEEE-TT CS
       eIF2A 106 iffspkgklvllaGfgnlaGeleiwdvkkkk.kiakaeaanatlvewspd 154
                 + +s+ g+++++   g + G++++w + +++  i+ ++  +   + w+p+
  EPX72730.1 216 LAYSYDGTILAV---GRIDGTIQFWGRGEIRpRITIYHPGDVGCMAWKPS 262
                 567777776665...57789999998886551444444444445567665 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.009
                 ECCEESSS.EEEEEE-TTSS-EEEEESSSSCEEEEEEC CS
       eIF2A  53 vvelkkegpihdvaWspkskefaviyGkmpakvslfdl 90 
                 ++++ + g++ ++aW+p+++   ++ Gk + +++++d 
  EPX72730.1 245 RITIYHPGDVGCMAWKPSADMKRILIGKGDGEIVIYDI 282
                 567788899***************************97 PP

  == domain 3  score: 25.5 bits;  conditional E-value: 2.3e-09
                 TT--EEECCEESSS.EEEEEE-TTSS-EEEEESSSSCEEEEEECS..CEEEEEEEEE.S--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE CS
       eIF2A  47 kkkksevvelkkegpihdvaWspkskefaviyGkmpakvslfdlk..vkviskleeq.krNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakae 142
                 k +k  +++  +e ++  +aW++++++fa   G  ++kv lfd+    k++++ +++ +  +i f+p +k +l  G g+   ++ +++ ++ kki+++ 
  EPX72730.1 290 KATKAGTISTAHEEQVCGIAWNYDGSQFA--TGGNDNKVCLFDSSnwEKPVFTWQHDaAVKAISFCPWQKSLLATGAGSHDKHIRFYNCNSGKKISELY 386
                 566778889999999*************8..7************767788888877615689****************************999999976 PP

                 -.TT--EEEE-TTSS.EEEEE CS
       eIF2A 143 a.anatlvewspdgr.yvlTa 161
                 + a+ t++ wsp+ + + +T+
  EPX72730.1 387 CgAQITSIHWSPSYKeFSVTF 407
                 53889*******865144554 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.0   5.3e-05      0.24     186     214 ..     207     237 ..     196     268 .. 0.85
   2 ?    1.6   0.1     0.024   1.1e+02     172     215 ..     287     330 ..     276     352 .. 0.88
   3 ?   -1.7   0.0      0.25   1.1e+03     199     217 ..     460     478 ..     455     491 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 5.3e-05
    Ge1_WD40 186 ehs..liveaafspdGtalatasedGevkff 214
                 e+s   +++ a+s dGt la+   dG+++f+
  EPX72730.1 207 ETSmyDVSSLAYSYDGTILAVGRIDGTIQFW 237
                 44433588889*******************9 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.024
    Ge1_WD40 172 lsveeieegllkieehsliveaafspdGtalatasedGevkffq 215
                  +v++++ g++   ++ ++   a+  dG   at  +d +v +f 
  EPX72730.1 287 SKVKATKAGTISTAHEEQVCGIAWNYDGSQFATGGNDNKVCLFD 330
                 56788899*****************************9998885 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 0.25
    Ge1_WD40 199 GtalatasedGevkffqvy 217
                 G  + +a +d +vkff + 
  EPX72730.1 460 GNNIVVAGSDETVKFFDLS 478
                 778999**********875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (515 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       394  (0.0219756); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 3531.28
//
Query:       EPX72731.1  [L=274]
Description: programmed cell death protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.4e-36  124.6   0.8    6.3e-36  124.1   0.5    1.4  2  PDCD2_C   Programmed cell death protein 2, C-terminal putativ


Domain annotation for each model (and alignments):
>> PDCD2_C  Programmed cell death protein 2, C-terminal putative domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0      0.52   9.3e+03      88     115 ..      28      49 ..      22      57 .. 0.66
   2 !  124.1   0.5   3.5e-40   6.3e-36      24     175 .]     120     264 ..      95     264 .. 0.75

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 0.52
     PDCD2_C  88 ggkPLwlsskkspeeesdipkCsnCgsk 115
                 gg PL+l sk+ ++ +      ++Cgs+
  EPX72731.1  28 GGPPLLLRSKDVTSLK------EKCGSN 49 
                 6778888866655555......455555 PP

  == domain 2  score: 124.1 bits;  conditional E-value: 3.5e-40
     PDCD2_C  24 dkeekekseleellseeeeeekskeekeseeeelekyeksl.dktfekFkkriaaepeQvlRYel..ggkPLwlsskkspeeesdipkCsnCgskrvFE 119
                 ++ e++  e ++++se e++  ++ + e+e+ ++e y k   d  f kF+kri+++p+Q+lRY    +++PLw+++++ p+   ++p+Cs Cg+kr+ E
  EPX72731.1 120 REIEVDS-EPSNEASEIEPKVLENLTVETENPTNEPYTKPTgDTSFLKFQKRISRAPDQILRYYHsdSSEPLWCNKDGIPT---NVPNCS-CGAKRILE 213
                 2222221.2222233333333333444448999999998889*********************7798899*****766554...69****.******** PP

     PDCD2_C 120 fQlmPqlinvLeveeeekesldWgtilVytCeksCeekeeeeneegyveEfvlvQw 175
                  Q++++l+++L+++++++++ldWg++++ytC++sC+       ++g++eE+++ Q+
  EPX72731.1 214 TQILSTLLTELNIDHSSENALDWGVLAIYTCSESCD-----LANKGIAEEVCWLQK 264
                 ***********************************5.....45689********95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (274 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       321  (0.017904); expected 358.6 (0.02)
Passed bias filter:                      272  (0.015171); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1917.28
//
Query:       EPX72732.1  [L=478]
Description: cell wall protein Asl1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.3e-55  186.9   0.5    6.2e-55  186.4   0.5    1.2  1  Glyco_hydro_cc  Glycosyl hydrolase catalytic core
  ------ inclusion threshold ------
       0.83    7.7   6.1        1.1    7.3   6.1    1.1  1  Hid1            High-temperature-induced dauer-formation prot
         10    5.5  13.6         17    4.8  13.6    1.3  1  FAM196          FAM196 family


Domain annotation for each model (and alignments):
>> Glyco_hydro_cc  Glycosyl hydrolase catalytic core
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  186.4   0.5     1e-58   6.2e-55       1     239 []     249     475 ..     249     475 .. 0.91

  Alignments for each domain:
  == domain 1  score: 186.4 bits;  conditional E-value: 1e-58
  Glyco_hydro_cc   1 GlaynadasddkllsaksskisWyYnwsskpsselssaalefvPmlwgaksadtdalanvksaakenskylLgFNePDlksqsnmspeeAaklwk 95 
                     Gla++ ++++ ++ ++ ++  +WyYnw+s+ps+  ss  +ef+   ++a+  + +a +++k+       ++ gFNePDl   snm++ +Aa+l+k
      EPX72732.1 249 GLAWI-GSTSPSVADKFKGFANWYYNWGSEPSNLDSS--FEFIQSQHSADGIQ-SASSTYKNG-----ATVFGFNEPDL---SNMDAGQAAALYK 331
                     78898.77788888888999*********99666655..6****999998765.666666666.....99*********...9************ PP

  Glyco_hydro_cc  96 qliqplre.kgvk.lvsPavaatnseegleWldeFleacskdckvdflavHwYkgdfeelkehieelheaynkpiWvTEfalqs..esgdasqee 186
                     q+++plr+ +++k l+sPa+   n   g++Wl++F+ +cs dc++df+  HwY++ +++lk  ++ l+++yn piW+TEfa+++  +s+  s ++
      EPX72732.1 332 QYLTPLRRnGNIKsLGSPAI--SN--VGVDWLSKFMGSCS-DCNIDFIVAHWYGTGADQLKGLVNALSSTYNMPIWITEFACTNwdVSKLPSLSD 421
                     *******7666655******..44..489***********.************777****************************999999***** PP

  Glyco_hydro_cc 187 tkeflnevlawldsqeyVeryawfg.frsevsnvgannaLldenGeltelgsaY 239
                     + + ++e++++l++++ Veryawf+ +++  ++vg+nnaL+++ Gel+ lgs Y
      EPX72732.1 422 VYRVFEESIEFLENNDAVERYAWFApAANLGASVGENNALVTAAGELSGLGSKY 475
                     *************************99999*********************998 PP

>> Hid1  High-temperature-induced dauer-formation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   6.1   0.00018       1.1     607     717 ..     134     283 ..      80     315 .. 0.60

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.00018
        Hid1 607 srieesrsesrspslsevpelksslaitddesk.aereksatessssqavs........................................qlremsek 664
                   +++s+ +s +ps+++ + + ss+ + ++ ++ ++   s+  s+++                                            ++ + s++
  EPX72732.1 134 AASSSSEVNSATPSSATSEAVPSSSTAASSSAEaKSATSSSVASRAT---PavsssaapapssssltpvisrgaplpsnsinvpagnaaltNAISSSSS 229
                 11111111111221111111111111111111101111112222222...1223455555566667778999999999********9998755555666 PP

        Hid1 665 arakesaesteesrqesatskkspsgmsqsaeekftptsewlesWkskl.pLet 717
                 + + +sa+ t + ++ s+   +    +s s+++kf+  ++w+ +W+s+  +L  
  EPX72732.1 230 SSSSKSASATPSGQKSSKRGLAWIGSTSPSVADKFKGFANWYYNWGSEPsNLDS 283
                 666667777777777777777778889999****************98645655 PP

>> FAM196  FAM196 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8  13.6    0.0028        17     178     316 ..      84     237 ..      36     266 .. 0.52

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0028
      FAM196 178 s.........nessntieqsssan.cseacksdessllssesekpslclsasssleeaeeqvaskaksksellldkdesnskekkklsktekatvvlpa 266
                 s         n+++ + ++s++ n ++++ +s+  s++s +s++++  +sa+ss++e+++ + s+a+s++ +   + +s+s e k  +++++a+  +pa
  EPX72732.1  84 SnttgpalwnNDTIPATSTSAAPNgAMDKIHSTPVSSFSATSKAAPVSSSAASSSSEVNSATPSSATSEAVPSSSTAASSSAEAKSATSSSVASRATPA 182
                 122445555556665555555555577788888778888888888888888888888887777766666666655555555555555555555555555 PP

      FAM196 267 skskstepvllnslaqveelk.....lasdspavsedkkkavslngsqastksaa 316
                  +s++  +  + sl+ v +++     +++++pa +    +a+s ++s++s+ksa+
  EPX72732.1 183 VSSSAAPAPSSSSLTPVISRGaplpsNSINVPAGNAALTNAISSSSSSSSSKSAS 237
                 5554433334444444443330000023333443333334444333333333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (478 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1090  (0.0607954); expected 358.6 (0.02)
Passed bias filter:                      405  (0.0225891); expected 358.6 (0.02)
Passed Vit filter:                        81  (0.00451782); expected 17.9 (0.001)
Passed Fwd filter:                        26  (0.00145016); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.88u 0.34s 00:00:01.22 Elapsed: 00:00:00.51
# Mc/sec: 2797.57
//
Query:       EPX72733.1  [L=406]
Description: mevalonate kinase Erg12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.5e-18   65.6   0.1    9.1e-18   64.3   0.1    1.7  1  GHMP_kinases_N   GHMP kinases N terminal domain
    0.00015   22.1   0.0    0.00046   20.5   0.0    1.9  1  GHMP_kinases_C   GHMP kinases C terminal
     0.0023   17.4   0.0     0.0039   16.7   0.0    1.4  1  GalKase_gal_bdg  Galactokinase galactose-binding signature


Domain annotation for each model (and alignments):
>> GHMP_kinases_N  GHMP kinases N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.3   0.1   1.5e-21   9.1e-18       2      66 .]     127     205 ..     127     205 .. 0.86

  Alignments for each domain:
  == domain 1  score: 64.3 bits;  conditional E-value: 1.5e-21
                     EEEEESSHTTSSSCHHHHHHHHHHHHHHHHTT........EHHHH..........HHHHHHHHHHHHHHHHHSHHHHHHHHSS CS
  GHMP_kinases_N   2 ivikseiPvgaGLGSSAAlavalvaAllallg........lslee..........aklaleaerlaqggngsggDvaasvyGg 66 
                     i+i+se+P+gaGLGSSA+++v+++++ll ++g            +           ++++ +e+++q g++sg+D+aa+++Gg
      EPX72733.1 127 ITINSEVPLGAGLGSSATVSVGVATCLLLFFGfiqppkegE---DysrhesltliENWSFIGECCIQ-GSPSGIDNAAATHGG 205
                     79*****************************9666665541...13444556779************.**************8 PP

>> GHMP_kinases_C  GHMP kinases C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   7.7e-08   0.00046       8      65 ..     286     339 ..     273     356 .. 0.84

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 7.7e-08
  GHMP_kinases_C   8 gdlellgellnlsqrselkavvgilppeleellealselGalgaklsGaGgGptvfal 65 
                     +  e lg+l++ +q    ++ + +++  ++++++a ++ G    kl+GaGgG++ ++l
      EPX72733.1 286 RLREILGQLIFINQK--MLEALNVSHITIDRVIDATKAIG--PTKLTGAGGGGCTITL 339
                     556678888888888..7889999999*************..************9987 PP

>> GalKase_gal_bdg  Galactokinase galactose-binding signature
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   6.5e-07    0.0039      11      45 ..       4      38 ..       1      42 [. 0.91

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 6.5e-07
                     -EEEEEEEEEEEE--S-TTTT-EEEEEEEEEEEEE CS
  GalKase_gal_bdg 11 pfvasAPGRvnLiGEHtDYngGfVlpmAieqdiyi 45
                      f++s+PG + L GEH    g   l+++i +++y+
       EPX72733.1  4 SFIVSSPGKTILFGEHAVVYGATALAASISLRTYC 38
                     59*******************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (406 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       635  (0.0354175); expected 358.6 (0.02)
Passed bias filter:                      527  (0.0293937); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2935.88
//
Query:       EPX72734.1  [L=866]
Description: chitin synthase I [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.4e-78  260.9   0.1    6.5e-78  260.3   0.1    1.3  1  Chitin_synth_1   Chitin synthase
    2.4e-28   99.0   3.1    1.3e-20   73.5   0.1    3.1  3  Chitin_synth_2   Chitin synthase
    1.7e-26   92.0   0.1    4.7e-26   90.5   0.1    1.8  1  Chitin_synth_1N  Chitin synthase N-terminal
    5.2e-07   29.8   7.7    5.2e-07   29.8   7.7    2.8  2  Glyco_trans_2_3  Glycosyl transferase family group 2


Domain annotation for each model (and alignments):
>> Chitin_synth_1  Chitin synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  260.3   0.1   1.4e-81   6.5e-78       1     163 []     203     365 ..     203     365 .. 0.99

  Alignments for each domain:
  == domain 1  score: 260.3 bits;  conditional E-value: 1.4e-81
  Chitin_synth_1   1 mynEdkellarTLkgvmkNieelkkrkkskvwgkdsWkkivVcivsDGrekideetldvlaalgvyqegvakkkvngkevkahlfeyttqlsvde 95 
                     +ynEd++l+arT++++mkNi++l+++++s vwg d+Wkk+vVci++DGr+ki+++tl++la++gvyq+g+ak+kvn+kev+ h++eyttqls+d+
      EPX72734.1 203 IYNEDEILFARTMHSIMKNISYLCSKRSSPVWGVDAWKKVVVCIIADGRTKIHPKTLAYLASIGVYQDGIAKNKVNEKEVTSHIYEYTTQLSIDP 297
                     6********************************************************************************************** PP

  Chitin_synth_1  96 elklkenekslvpvqllfclkeknakkinShrWlfnafarllqPevcvlldvGtkpgkkslyklwkaf 163
                     +lk+k++ek++vpvq++fclke+n+kkinShrW+f+a++++lqP+vc+lld+Gt+pg++s+y+lwk+f
      EPX72734.1 298 NLKFKGSEKGIVPVQMIFCLKEQNKKKINSHRWFFQALCPVLQPTVCILLDAGTRPGDQSIYHLWKSF 365
                     ******************************************************************98 PP

>> Chitin_synth_2  Chitin synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.17   7.5e+02      19      50 ..     188     220 ..     174     230 .. 0.72
   2 !   73.5   0.1     3e-24   1.3e-20     204     429 ..     343     579 ..     337     642 .. 0.73
   3 !   24.5   0.1   2.2e-09   9.8e-06     434     492 ..     672     730 ..     658     758 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.17
  Chitin_synth_2  19 slefqlkfticl.vtaysegeeglrttldslas 50 
                      + ++ k  ic+ +t y e+e  + +t+ s+ +
      EPX72734.1 188 LFAQPRKTEICIaITIYNEDEILFARTMHSIMK 220
                     55666677777449**************99864 PP

  == domain 2  score: 73.5 bits;  conditional E-value: 3e-24
  Chitin_synth_2 204 ivlmvdadtkvapdsltrlvaalvkdpeilglcGetkian.kkes..w..vtaiqvfeyyishhlskafesvfGsvtclPGcfslyrikaakgad 293
                     +++++da t+    s+ +l  ++  ++++ g cGe  +   k  s  +  + aiq fey +s  l k +es+fG ++ lPG fs+yr +a  + d
      EPX72734.1 343 VCILLDAGTRPGDQSIYHLWKSFDINQRVAGACGEVVVMKgKYGSglFnpLVAIQNFEYKMSNLLDKPLESIFGFISVLPGAFSAYRYEALLNDD 437
                     57889******************************988651444432233689*************************************99999 PP

  Chitin_synth_2 294 gkwvPilvspeiveeysenvvdtlhkknllllGedrylttlllktfpk.rktvfvpqakcktvaPdtfkvllsqrrrwin....stvhnllelvl 383
                     +   P+  ++    e  + +   + + n+ +l edr l   l+ ++++     +v++a + t +Pd+   +l qrrrw+n    +++h ++   +
      EPX72734.1 438 NGNGPL--ESYFRGELQDGECSGIFEANM-YLAEDRVLCFELVSKHNQaWTLHYVKSAYADTDVPDRVPEFLLQRRRWLNgsffAAIHSIVHYYR 529
                     989997..566678888999999999996.799*****976666666515678***************************433335777777777 PP

  Chitin_synth_2 384 vrdlcGtfcfsmrfvv.fieligtvvl...Pvaiaftlylivasilkskl 429
                     + +   tf   + ++v f+ l   ++     v   f+++ +++s +++k 
      EPX72734.1 530 IFQSTHTFGRKVLLIVeFLYLFLHMLYswfNVGNFFIIFYVLTSSVAPKE 579
                     77766666554444443334433333211134444444444444444333 PP

  == domain 3  score: 24.5 bits;  conditional E-value: 2.2e-09
  Chitin_synth_2 434 plvllaivlGlpailivltarkleyvawllvyllalPifnfvlPlyafwhlddfswGet 492
                      +v l+  +G+ a++ ++ +  +++++ +  yll  Pi++ +l +yaf +  d swG  
      EPX72734.1 672 IVVSLCTTYGMYALVSLISCDPWHMLTSFFQYLLLSPIYTNLLSVYAFCNTHDVSWGTK 730
                     35668999*************************************************74 PP

>> Chitin_synth_1N  Chitin synthase N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.5   0.1     1e-29   4.7e-26       2      73 .]     131     202 ..     130     202 .. 0.97

  Alignments for each domain:
  == domain 1  score: 90.5 bits;  conditional E-value: 1e-29
  Chitin_synth_1N   2 kkvkLlngnlvldlpvpkkllkalpeeekeseEfthmRYtAvTcdPddftkegytLRqalyg..ReteLlIviT 73 
                      ++v+L++gnlvld+pvpkkl+++lp++  +++Ef+++RY+A+Tc+P+df+k+ +tLRq l+   R+te++I+iT
       EPX72734.1 131 QRVELFRGNLVLDCPVPKKLIASLPQQ--QDREFSYIRYSAATCEPQDFVKNLFTLRQPLFAqpRKTEICIAIT 202
                      79***********************65..8******************************999**********9 PP

>> Glyco_trans_2_3  Glycosyl transferase family group 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.8   7.7   1.2e-10   5.2e-07       3     191 ..     345     559 ..     343     717 .. 0.81
   2 ?   -3.7   1.0       2.1   9.6e+03     181     193 ..     824     845 ..     790     859 .. 0.47

  Alignments for each domain:
  == domain 1  score: 29.8 bits;  conditional E-value: 1.2e-10
  Glyco_trans_2_3   3 lllDaDtvlppdclreiaaela.spevaivqgpvlvm....nva...nwleelaalffaedhgkdilvrealgrvvpsvGsgaflrrsalq... 85 
                      +llDa t++  ++++ +   ++ +++va ++g v+vm    + +   n l+ ++ ++++ + + d +  + +g    ++G+ ++ r +al    
       EPX72734.1 345 ILLDAGTRPGDQSIYHLWKSFDiNQRVAGACGEVVVMkgkyG-SglfNPLVAIQNFEYKMSNLLDKPLESIFGFISVLPGAFSAYRYEALLndd 437
                      799************9999999889***********976541.323366777777889********************************9897 PP

  Glyco_trans_2_3  86 .............evg......gwdgdessvsEDfdmglrlqrkG...yrvrfvpeslvkekspltlraalrQrkRwayGceleklillvrllg 157
                                     +       ++  +  ++ED  +++ l +k    +++++v ++   + +p+++  +l Qr+Rw+ G      +++++++ 
       EPX72734.1 438 ngngplesyfrgeL-QdgecsgIFE-ANMYLAEDRVLCFELVSKHnqaWTLHYVKSAYADTDVPDRVPEFLLQRRRWLNGS----FFAAIHSIV 525
                      77776666666640.2555554555.678************8777678999***999***********************6....444444444 PP

  Glyco_trans_2_3 158 ylgsllwsalplhlallllfsllalalvllllll 191
                       + +++ s+  +   +ll+  +l+l l +l+ ++
       EPX72734.1 526 HYYRIFQSTHTFGRKVLLIVEFLYLFLHMLYSWF 559
                      4444444444444444444444443333333222 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 2.1
  Glyco_trans_2_3 181 a.........lalvllllllla 193
                                ++lv+l++ +la
       EPX72734.1 824 GisitenktsYYLVFLFWSILA 845
                      0223344443444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (866 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       594  (0.0331307); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.70u 0.27s 00:00:00.97 Elapsed: 00:00:00.45
# Mc/sec: 5832.02
//
Query:       EPX72735.1  [L=212]
Description: diadenosine 5',5'''-p1,p6-hexaphosphate hydrolase Aps1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-16   60.5   0.2    6.3e-16   58.6   0.2    1.9  1  NUDIX     NUDIX domain


Domain annotation for each model (and alignments):
>> NUDIX  NUDIX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.6   0.2   3.5e-20   6.3e-16       3      88 ..      34     119 ..      32     202 .. 0.79

  Alignments for each domain:
  == domain 1  score: 58.6 bits;  conditional E-value: 3.5e-20
                 EEEEEEE.EEETTSEEEEEEESSSSTTTEESSEEECBTTSHHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEEEEEEEE.....EEEEEEEE CS
       NUDIX   3 rravgvv.llnekgevLlvrrskkpfpgWelPgGkvepgEtpeeAArREleEEtGleaellellgrlhylapydgpygd.....eheilyvf 88 
                 r a+gv+ l  +k++vL+v ++ k+ p W +P+G+ e++E++++AA+RE +EE Gl+ + ++ lg++++ +p+d+++++     +       
  EPX72735.1  34 RLAAGVIaLSADKQKVLMVSSA-KKLPCWVVPKGGWEADESVQQAALREGWEEGGLIGKITRSLGCFKDDRPTDTVDRRkkyleQ-----QI 119
                 789****77777777*******.*********************************99*******************98444321.....22 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1108  (0.0617993); expected 358.6 (0.02)
Passed bias filter:                      635  (0.0354175); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 1659.18
//
Query:       EPX72736.1  [L=231]
Description: pyrimidine 5'-nucleotidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      4e-12   46.6   0.0    6.4e-12   45.9   0.0    1.3  1  HAD_2           Haloacid dehalogenase-like hydrolase
    1.5e-10   41.7   0.0    4.2e-10   40.3   0.0    1.7  1  Hydrolase       haloacid dehalogenase-like hydrolase
     0.0016   18.4   0.0     0.0028   17.7   0.0    1.4  1  Hydrolase_like  HAD-hyrolase-like
  ------ inclusion threshold ------
      0.016   15.0   0.1      0.036   13.8   0.1    1.7  1  NIF             NLI interacting factor-like phosphatase
      0.023   14.5   0.0        3.7    7.4   0.0    2.2  2  Acid_PPase      Acid Phosphatase


Domain annotation for each model (and alignments):
>> HAD_2  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.9   0.0   1.8e-15   6.4e-12       2     175 ..       9     189 ..       8     191 .. 0.79

  Alignments for each domain:
  == domain 1  score: 45.9 bits;  conditional E-value: 1.8e-15
       HAD_2   2 iFDlDgTlldteeliiqafnelleey.....glselseeelrkliglslrellrklgeseeeeekieellrkyneekkk.kevkpydgvkelLeeLkea 94 
                  FDlD+ l+ ++ +i +++++ +  y     g+++ + e lr+++  ++  ++r l    +   +  ++ +++ +++   k +k  d ++++L eL ++
  EPX72736.1   9 FFDLDNCLYPKSYAIHDMMASRITAYfsdklGVPQDEAERLREIYYRHYGIAIRGLVLHHQI--DAVDYDKRVDQSLPLeKVIKRDDRLRDMLLEL-RQ 104
                 69*******99999988877766666555446666777777777777776666666665442..455555555555544578899999********.99 PP

       HAD_2  95 gyklgivTsksreaveekleqlgiesyFdvivtsedvekk...KPdpeviekaleklkl.kkeeviyvGDsptDieaakkagikv 175
                 +ykl i T+     +++ l+ lgi + F+ +   +   k    KP pe++++++e  ++ kke++i++ Ds   i +a+ +g k+
  EPX72736.1 105 KYKLWIFTNAYVVHATRVLALLGIADCFHGVTYCDYDAKDlvaKPMPEMYARVMEDAGVtKKENCIFFDDSYGNIVGARDFGWKY 189
                 *****************************99887766665688**************87256789*****************886 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.3   0.0   1.2e-13   4.2e-10       2     207 ..       6     183 ..       5     186 .. 0.76

  Alignments for each domain:
  == domain 1  score: 40.3 bits;  conditional E-value: 1.2e-13
                 SEEEEESBTTTBCHHHHHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHH.HHHHHHHHHETTTE..HHHHTHHHHHHHHHCHHHHHHHHHHHHHHC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase   2 ktvvfDkdGTLttgepsvedvivsaalalaaaletgsehpigkalvaaakar.sgaltgfatfigrg..ayaigkpewltaldippdlgaaigsaqsqg 97 
                 k+v+fD+d+ L+  +  ++d ++s+                   ++a++ +  + + ++ +++ +    +y i  + ++ ++        +i++   + 
  EPX72736.1   6 KVVFFDLDNCLYPKSYAIHDMMASR-------------------ITAYFSDKlGVPQDEAERLREIYyrHYGIAIRGLVLHH--------QIDAVDYD- 76 
                 8999999999998888888888888...................88888888533334444433333558888888888888........34444444. PP

                 HHHHHHTTHHHHHHHHHHTHHBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTT.GGGE.SEEEEHHCES..STTTSHHHHHHHHHHHT.STGG CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxx.xxxxxxxxxx..xxxxxxxxxxxxxxxxx.xxxx RF
   Hydrolase  98 rtvallqaralavftiadplkvkpeaaeavasLkaagievvlltgdnpetaeraanqlG.ddyf.daviasdiet..vakpspegkvaaireLq.gkpe 191
                        +r+++ + ++  +k  + +++++ +L+++ +++++ t+    +a r++  lG +d+f  ++++ ++ +  vakp pe++ ++++  +  k+e
  EPX72736.1  77 -------KRVDQSLPLEKVIKRDDRLRDMLLELRQK-YKLWIFTNAYVVHATRVLALLGiADCFhGVTYCDYDAKdlVAKPMPEMYARVMEDAGvTKKE 167
                 .......56666666666655666699999999966.89*************************66666666666*******************7789* PP

                 GEEEEESSHHHHHHHH CS
                 xxxxxxxxxxxxxxxx RF
   Hydrolase 192 evamVGDgvnDaaala 207
                 ++++++D+   + +++
  EPX72736.1 168 NCIFFDDSYGNIVGAR 183
                 *******987776665 PP

>> Hydrolase_like  HAD-hyrolase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   7.7e-07    0.0028       3      46 ..     147     190 ..     145     216 .. 0.77

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 7.7e-07
                     STTSSHHHHHHHHHH---.GGGEEEEES-TTTHHHHHHHCT-EEE CS
  Hydrolase_like   3 gKPepemydfalevlgsd.peevlmiGDrlatDiagAnnaGwksv 46 
                      KP pemy + +e+ g++ +e++++  D+ +  i gA+++Gwk  
      EPX72736.1 147 AKPMPEMYARVMEDAGVTkKENCIFFDDS-YGNIVGARDFGWKYT 190
                     6**************99856778888888.************964 PP

>> NIF  NLI interacting factor-like phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.1     1e-05     0.036      33     114 ..      88     176 ..       6     186 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1e-05
         NIF  33 vlkR.pgldefLkelsklyevvifTasseeyaeavidildpekkllshrlyrescvkkkgeyvKdLsll.gr........dlsrvvivDdsp 114
                 v+kR   l+++L el ++y++ ifT+++   a +v+  l    + ++ + y +  +  k  + K +  +  r        + ++ +++Dds 
  EPX72736.1  88 VIKRdDRLRDMLLELRQKYKLWIFTNAYVVHATRVLALLGIADC-FHGVTYCDYDA--KDLVAKPMPEMyARvmedagvtKKENCIFFDDSY 176
                 555546799******************************99887.88887777664..4444444444431122223335777888888876 PP

>> Acid_PPase  Acid Phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.0     0.001       3.7       4      27 ..       6      29 ..       4      53 .. 0.80
   2 ?    5.2   0.0    0.0049        17     112     139 ..     153     181 ..     116     194 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.001
                SEEEE-STTTSSSS-TTTSS-S-E CS
  Acid_PPase  4 klivFDLDyTLWpfevdtlvsapl 27
                k++ FDLD +L p    ++  ++ 
  EPX72736.1  6 KVVFFDLDNCLYPKSYAIHDMMAS 29
                799*********988877766554 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0049
                 HHHHHHHHH--.-GGGEEEEES-HHHHHH CS
  Acid_PPase 112 hfeklkkktgi.eyedmlfFDdesrniev 139
                  + ++ ++ g+ + e+ +fFDd   ni  
  EPX72736.1 153 MYARVMEDAGVtKKENCIFFDDSYGNIVG 181
                 56778888999678899******999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       425  (0.0237046); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.46
# Mc/sec: 1498.68
//
Query:       EPX72737.1  [L=159]
Description: calcipressin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.5e-18   65.7   0.0    5.3e-18   65.4   0.0    1.1  1  Calcipressin  Calcipressin


Domain annotation for each model (and alignments):
>> Calcipressin  Calcipressin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.4   0.0   2.9e-22   5.3e-18       8     130 ..       9     132 ..       2     157 .. 0.82

  Alignments for each domain:
  == domain 1  score: 65.4 bits;  conditional E-value: 2.9e-22
  Calcipressin   8 dnlellralieqtdeilawsllksFrRiivvfsseeaaaa.vrsqldwekeeilGkklrlYfa.qpttidrda.akkhLalPeaeklFlISPPaSPP 101
                    ++e lr++i+ +  +   +++k+ ++++  + ++ +a++ + + l+   +   G  +  +++  +   d+++ +++ L++P++ek++lISPP+SPP
    EPX72737.1   9 RTVEELREFIHSFSSPSSTKVIKGLGKVLAFY-NDSSAERlALHTLQ-YTTLPSGTPIDCHYVpDVSAKDPSLmQSSSLKVPKSEKNWLISPPGSPP 103
                   56799**********************97655.55555551555555.457789******999778888888625689******************* PP

  Calcipressin 102 egweqkaedaPnrtvlaeDlqealakLel 130
                    gw + +e+ Pn   la+Dlq +l++L+ 
    EPX72737.1 104 LGWTPIQEESPNSDYLAHDLQLRLDQLGN 132
                   ************************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       391  (0.0218082); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1187.34
//
Query:       EPX72738.1  [L=349]
Description: CMGC/MAPK/P38 protein kinase Sty1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.4e-67  226.2   0.0    5.3e-67  226.0   0.0    1.1  1  Pkinase        Protein kinase domain
    4.8e-32  111.3   0.0      6e-32  110.9   0.0    1.2  1  Pkinase_Tyr    Protein tyrosine kinase
    9.9e-06   24.7   0.1    1.4e-05   24.3   0.1    1.2  1  Haspin_kinase  Haspin like kinase domain
    0.00035   20.0   0.1     0.0012   18.2   0.1    1.7  1  Kdo            Lipopolysaccharide kinase (Kdo/WaaP) family
      0.001   19.1   0.1      0.003   17.5   0.0    1.7  2  APH            Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.017   14.4   0.0       0.47    9.7   0.0    2.2  2  Kinase-like    Kinase-like
      0.048   13.3   0.0      0.082   12.5   0.0    1.4  1  FTA2           Kinetochore Sim4 complex subunit FTA2
       0.11   12.0   0.0        0.2   11.2   0.0    1.3  1  RIO1           RIO1 family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  226.0   0.0   2.4e-70   5.3e-67       1     264 []      20     299 ..      20     299 .. 0.87

  Alignments for each domain:
  == domain 1  score: 226.0 bits;  conditional E-value: 2.4e-70
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEE.SSEEEEEEE--TTEBHHHHHHHHSS--HH CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfee.kdelylvleyveggeladllerkgslsee 98 
                 y++l+ +G G+fG V +a+++ tg  vAvKki k   +    k++ rE+k+lk+l+h+n++ l ++f +  +++y+++e++ ++ l++ll+ ++ l+ +
  EPX72738.1  20 YSDLQPIGMGAFGLVCSAKDQLTGMNVAVKKIMKPFSTPVLAKRTYRELKLLKHLRHENVISLSDIFISpFEDIYFITELLGTD-LHRLLT-SRPLETQ 116
                 67899*************************************************************9886899********966.999997.689**** PP

                 HHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHH.TTSCBSHHHHHHHHHHHHHHHHHSS-S CS
     Pkinase  99 eakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelessskltsfvgtseYlAPEvl.keneyskkvDvWslGvilyelltgkpp 196
                  ++ +++qil+gl+++Hs+g+iHrDlKp+NiLi+e+ +lKi+DFGla+  + +  +t +v t++Y+APE++ + ++y  +vD+Ws+G+i++e++ gkp+
  EPX72738.1 117 FIQYFLYQILRGLKFVHSAGVIHRDLKPSNILINENCDLKICDFGLARIQDPQ--MTGYVSTRYYRAPEIMlTWQKYNVEVDIWSAGCIFAEMIEGKPL 213
                 ************************************************98885..7**************9899************************* PP

                 TTTSSHHHHHHHHHHT.....HHHHHHHCT........SHH...HHHTTS...............-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 197 fsgekgkekvekeldq.....lekilkilg........etkeklpeasei...............seeakdllkkllkkdpkkRltaeellqhpyl 264
                 f+g+++ ++++ +++      +e i  i                     +               ++ a dll+k+l  dp+kR++a+++l+h+yl
  EPX72738.1 214 FPGRDHVNQFSIITELlgtppMEVIETICSkntlrfvqS----------LpkkekvpfaekfknaDPAAVDLLEKMLVFDPRKRISAADALAHEYL 299
                 **7777775554444443333333333333554544440..........24555556666669999****************************97 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.9   0.0   2.7e-35     6e-32       5     210 ..      24     218 ..      21     287 .. 0.86

  Alignments for each domain:
  == domain 1  score: 110.9 bits;  conditional E-value: 2.7e-35
                  EEEEEESSEEEEEEEEETTTTSSEEEEEEEEE.STTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEE.SSSSEEEEEE--TTEBHHHHHHHTCTTTS CS
  Pkinase_Tyr   5 kklGeGafGkVvegtlkgekekkevkVavKtl.keeateeekeelleeakimkklkhpnivkllgvct.keepllivteyvkgGdLlkfLrkkekekl 100
                  + +G GafG V++++ +     + ++VavK++ k  +t    ++ ++e+k++k+l+h+n+++l  + +   e ++++te++   dL+  L+++   +l
   EPX72738.1  24 QPIGMGAFGLVCSAKDQ----LTGMNVAVKKImKPFSTPVLAKRTYRELKLLKHLRHENVISLSDIFIsPFEDIYFITELLG-TDLHRLLTSR---PL 113
                  679**********9988....999*****98847777778899***********************9977788******985.69*****998...9* PP

                  BHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHH.SEEEHHHHHHHHHHHHHH CS
  Pkinase_Tyr 101 tlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslke.kkftsksDvWsfGvllwE 197
                  +++ +  f +q+ +G+++++s  ++Hrdl   N+L++en   ki+DfGLar    d ++   ++      + apE++ + +k++++ D+Ws G +  E
   EPX72738.1 114 ETQFIQYFLYQILRGLKFVHSAGVIHRDLKPSNILINENCDLKICDFGLARIQ--DPQM---TGYVSTRYYRAPEIMLTwQKYNVEVDIWSAGCIFAE 206
                  ***************************************************77..3333...3333444567***9766267**************** PP

                  HHTTSSGTTTTSH CS
  Pkinase_Tyr 198 iftlgespypglk 210
                  +++ g+  +pg +
   EPX72738.1 207 MIE-GKPLFPGRD 218
                  *99.777666654 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.3   0.1     6e-09   1.4e-05     157     260 ..      62     169 ..      42     194 .. 0.73

  Alignments for each domain:
  == domain 1  score: 24.3 bits;  conditional E-value: 6e-09
  Haspin_kinase 157 kgtypglllllqdkvlkek....pdfyseqqlflvlllkdkGtdLeev...klkswkqalsifwqivkiLyvaEtkfeFEHRdLhldniLvdknln 245
                    k ty +l ll + +  +e+     d++ +    ++ + +  GtdL ++   +  + + ++  ++qi+  L+ + ++    HRdL+  niL+++n  
     EPX72738.1  62 KRTYRELKLLKHLR--HENvislSDIFISPFEDIYFITELLGTDLHRLltsRPLETQFIQYFLYQILRGLKFVHSA-GVIHRDLKPSNILINENCD 154
                    55666554443222..111223347777777888889999999999984333334555666678888888877655.778**************** PP

  Haspin_kinase 246 vtlidlklsRlesse 260
                      ++d+ l+R+++++
     EPX72738.1 155 LKICDFGLARIQDPQ 169
                    ***********9544 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.1   5.5e-07    0.0012      41     166 ..      48     160 ..      37     171 .. 0.84

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 5.5e-07
         Kdo  41 lgklskdlyrfklgrtravrEfrllkrLeeagvavpkpvaagavkvgleyrAlllterlegaqdLedllakwaelaeelkrallkavgrliaklhragv 139
                 ++k++k  ++ ++ + r  rE++llk L+++ v  +  ++       ++     +te l    dL  ll++ + l+ +  +  l ++ r  +  h+agv
  EPX72738.1  48 VKKIMKP-FSTPVLAKRTYRELKLLKHLRHENVISLSDIFIS-----PFEDIYFITELLG--TDLHRLLTS-RPLETQFIQYFLYQILRGLKFVHSAGV 137
                 5677887.778888899999***********99999999975.....5555667888875..69******7.679999********************* PP

         Kdo 140 nHadlyaknillqqeeeeeaeiwliDl 166
                  H+dl + nil++++      + + D+
  EPX72738.1 138 IHRDLKPSNILINENC----DLKICDF 160
                 ************9986....4444455 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.99   2.2e+03      32      52 ..      59      79 ..      50     119 .. 0.70
   2 !   17.5   0.0   1.4e-06     0.003     163     201 ..     132     168 ..      89     170 .. 0.74

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.99
                S-HHHHHHHHHHHHHHHHTT- CS
         APH 32 raaeeirrevallrlLakagv 52
                 +a ++ re++ll++L+  +v
  EPX72738.1 59 VLAKRTYRELKLLKHLRHENV 79
                478888999999999987765 PP

  == domain 2  score: 17.5 bits;  conditional E-value: 1.4e-06
                 SS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-EEEEC CS
         APH 163 elptvllHgDlhpgNllvdpddgrvtGviDfedaglgpp 201
                   +++++H+Dl+p N+l++++ +    + Df++a++ +p
  EPX72738.1 132 VHSAGVIHRDLKPSNILINENCDL--KICDFGLARIQDP 168
                 46799**************44444..59********999 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0     0.026        58      18      63 ..      24      69 ..      17      91 .. 0.79
   2 ?    9.7   0.0   0.00021      0.47     138     197 ..     110     168 ..      69     204 .. 0.71

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.026
  Kinase-like 18 ellkkgdrsvvfevkdqetgeplavkvfllpseaskkdlerlkeqe 63
                 ++++ g +++v  +kdq tg ++avk  + p   +  +   ++e +
   EPX72738.1 24 QPIGMGAFGLVCSAKDQLTGMNVAVKKIMKPFSTPVLAKRTYRELK 69
                 79999********************998777655555555555544 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00021
  Kinase-like 138 hkkletiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtk 197
                   ++let   ++   q++r     ++ g++h ++++ n+l +e+  l++ +f+ L r  + 
   EPX72738.1 110 SRPLETQFIQYFLYQILRGLKFVHSAGVIHRDLKPSNILINENCDLKICDFG-LARIQDP 168
                  5666666666766999999999*****************************7.5554444 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   3.7e-05     0.082     172     211 ..     116     155 ..     103     164 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 3.7e-05
        FTA2 172 elevsqlpkllrdlkklhklgIvvrDlkeenyidgkLvDl 211
                 ++++  l ++lr lk +h++g+++rDlk++n++ ++ +Dl
  EPX72738.1 116 QFIQYFLYQILRGLKFVHSAGVIHRDLKPSNILINENCDL 155
                 566677899**********************975544443 PP

>> RIO1  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0     9e-05       0.2     105     150 ..     116     161 ..      87     172 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 9e-05
                 HHHHHHHHHHHHHHHHHHHTSTEEESS-STTSEEEETT.EEEE--GT CS
        RIO1 105 eeaeelyeevleemrklykeaglvHaDLSeyNvlvded.kvviIDvs 150
                 + ++  ++++l+   k+++ ag++H DL   N+l++e+ ++ i D++
  EPX72738.1 116 QFIQYFLYQILRG-LKFVHSAGVIHRDLKPSNILINENcDLKICDFG 161
                 4556667778885.56777*******************999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (349 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       308  (0.0171789); expected 358.6 (0.02)
Passed bias filter:                      292  (0.0162865); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 2534.62
//
Query:       EPX72739.1  [L=568]
Description: oxidoreductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-07   31.0   0.0    3.1e-07   30.2   0.0    1.5  1  ApbA      Ketopantoate reductase PanE/ApbA
    1.2e-05   25.5   0.0    1.9e-05   24.8   0.0    1.3  1  ApbA_C    Ketopantoate reductase PanE/ApbA C terminal
  ------ inclusion threshold ------
       0.25   10.3   1.7       0.48    9.3   1.7    1.4  1  Pacs-1    PACS-1 cytosolic sorting protein


Domain annotation for each model (and alignments):
>> ApbA  Ketopantoate reductase PanE/ApbA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   0.0   5.2e-11   3.1e-07       2     150 ..      12     167 ..      11     169 .. 0.83

  Alignments for each domain:
  == domain 1  score: 30.2 bits;  conditional E-value: 5.2e-11
                 EEES-SHHHHHHHHHHHH.HTHC....EEEE-SCHHHHHHHHHCEEEEETT.CEEEEEECEEECCH..SCCCCS-ESEEEE-SSGGGHHHHHHH.HGGG CS
        ApbA   2 ailGaGaiGsllaakLak.agad....vtlilrsrrlealkknGlrltseg.geeilrppealsae..ekselepidlvivtvKayqteealee.ikpl 91 
                 + +G  ai +ll+++L++ + a+    + + +  +         l+++s+  g ++ rp+ ++++      e++ +d+++v++K  +   +l + i+p+
  EPX72739.1  12 LCIGNPAITTLLGWRLQQsTSATcqetILFFNIPD----APISPLTIHSKPfGVRKYRPTFSANKIidLANEGKVFDYILVSIKPCPHSFNLPSvIEPV 106
                 56777788888888887744333656333333333....34456778888888888888888888888678999************************* PP

                 ECTCEEEEEESSS...SCHHHHHTTTSTTSEEEEEEEE-EEEEEETTEEEECS--EEEEEES CS
        ApbA  92 ldpntvvlllqNG...lgheeelrealpkprvlggvtthgatregpgevhhagkgeikigel 150
                 +++  +++++ N+   +g ee++  ++p+++v++     g+++++ +e+hh  +  +++g++
  EPX72739.1 107 VTKG-HTCIVYNTtgsIGIEETFFNHFPENPVYPFSFHSGIVQRDVNEFHHGENTPLYLGKY 167
                 ***9.99*****988999*****************************************987 PP

>> ApbA_C  Ketopantoate reductase PanE/ApbA C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.0   3.2e-09   1.9e-05       6     124 ..     200     317 ..     195     318 .. 0.92

  Alignments for each domain:
  == domain 1  score: 24.8 bits;  conditional E-value: 3.2e-09
      ApbA_C   6 rweKllinaainpltalldckn.gellespelralvrallkEalavaeaegvelseerleeaveavlektaanrsSMlqDveagrktEidyinGavvkl 103
                 ++  l++ +++ plt+l++ +n ++ll+++e+  l + +l E+  +a+    +++ +r+ ++ e +l  ++an   M++ + +++++E    + ++v+l
  EPX72739.1 200 QLDDLAFPISLFPLTVLMQNPNaAKLLQQQEVLSLHKWILLELDSIANVFDGSIDIKRVSKQRESFLGYASAN--PMYKEYIQHKPMEYVSSLRYLVQL 296
                 677788889999**********999**********************99888899**************9995..6*********************** PP

      ApbA_C 104 AeklgvetPvnellyellkal 124
                 A+ +++++P++++l  ll+ +
  EPX72739.1 297 AANHDIKVPYMHTLSILLSNI 317
                 *************99888765 PP

>> Pacs-1  PACS-1 cytosolic sorting protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   1.7     8e-05      0.48     230     319 ..     467     560 ..     452     568 .] 0.58

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 8e-05
      Pacs-1 230 asllsssppsssspag.kesatppsspsvsss...lsalsspsssasealelqvDYWtaaqpaekkkeeekkd.tgkntlkstfrslqvsrlpss 319
                 +  ls++p ss+sp +   + t ps ps + +   ++++s++ +s++e +e + DY t  ++ +++++++kk  ++ +++ +t     v r p +
  EPX72739.1 467 KEALSQTPSSSGSPRAgYYNDTEPSTPSATYGagmSRPNSNSANSQHEDVEGESDYFTIMNHPKNETNSRKKSmQSETSM-MTVIPSAVRRFPLT 560
                 45566667777764442336666666665544000333333333444************999999988888863333333.33333344555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (568 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       405  (0.0225891); expected 358.6 (0.02)
Passed bias filter:                      255  (0.0142228); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 4092.45
//
Query:       EPX72740.1  [L=395]
Description: COPII-coated vesicle component Erv46 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-71  240.7   0.2    2.4e-71  240.1   0.2    1.2  1  COPIIcoated_ERV  Endoplasmic reticulum vesicle transporter
    1.6e-27   95.7   0.1    4.4e-27   94.3   0.0    1.9  2  ERGIC_N          Endoplasmic Reticulum-Golgi Intermediate Com


Domain annotation for each model (and alignments):
>> COPIIcoated_ERV  Endoplasmic reticulum vesicle transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  240.1   0.2   2.7e-75   2.4e-71       1     221 []     144     383 ..     144     383 .. 0.95

  Alignments for each domain:
  == domain 1  score: 240.1 bits;  conditional E-value: 2.7e-75
  COPIIcoated_ERV   1 CYgaeeee.....kCCntCedVreaYkkkgwafkdgeeieqCeregykeklkeqkkegCrikGklevnkvaGnfhiapgksfqeekrhvhdlss 89 
                      CYga + +     +CCntC+ VreaY +++wa+ d + ++qC++e+yke+ ++qk egC+++G+l vn++aGnfhiapg+s q++ +hvhd++ 
       EPX72740.1 144 CYGAAAFSssetpGCCNTCNAVREAYGRANWAIGDVDAFKQCQEENYKENYESQKVEGCNLAGQLFVNRMAGNFHIAPGRSSQKGMHHVHDTND 237
                      9**9987778899********************************************************************************* PP

  COPIIcoated_ERV  90 yek..eklnfsHtihkLsfgeelpgek..knPLdgtkkeeeekalmfqYflkvvptkyekl..dkkkietnqysvtehersleggkde...... 171
                      +++  + +++sH+ih+Lsfg+ l+ +   knPLd++ k+ ++ +++++Yf+k+v+ ++ +l  + ++i+tn+y vteher+++gg++e      
       EPX72740.1 238 FSRekDLHDMSHIIHELSFGPPLDPSIatKNPLDNMVKKINSPDYRYEYFIKCVSHQFVFLksNMETIDTNRYAVTEHERPIHGGREEkvpshi 331
                      *975459*************9988776668*******99********************9953336899****************999****** PP

  COPIIcoated_ERV 172 .sekglPGvffsYeisPlkvivkeerk.sflhfltslcaiiGGvltvasliD 221
                        ++g+PGv+f+ +isP++vi+++ r  ++ +flt++++++GG++t+a++iD
       EPX72740.1 332 nVRGGVPGVWFHIDISPMRVIHRQFRGnTLGGFLTNVLSLLGGCVTLATFID 383
                      *99***********************989**********************9 PP

>> ERGIC_N  Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.3   0.0   4.9e-31   4.4e-27       1      90 [.       7      96 ..       7      97 .. 0.98
   2 ?   -3.0   0.0       1.1   9.7e+03      18      27 ..     370     379 ..     352     383 .. 0.54

  Alignments for each domain:
  == domain 1  score: 94.3 bits;  conditional E-value: 4.9e-31
                XXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXX-EEEEEE--S--SEEEEEEEEEE.SS-GGGEEEEEEETTECEE CS
     ERGIC_N  1 lrrfDafpKvpedltqktlsGgiislvcillilfLllselteylttevkeelvvdksrsekleinlditfpalpCellsldvqDesgehe 90
                lrrfD+f+K+ ed + kt+sGg+i+l+++ +il+++l e+ +y+++ v++e+vv+ s++e++ein+++tfp++pC+ll++dv+D+sge +
  EPX72740.1  7 LRRFDFFQKTVEDARIKTASGGLITLLSSGIILIVILLEWIQYRKVVVVPEIVVNPSHGERMEINFNVTFPKIPCQLLGVDVLDISGEFQ 96
                79************99***********************************************************************865 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.1
                 XXXXXXXXXX CS
     ERGIC_N  18 tlsGgiislv 27 
                 +l Gg+++l+
  EPX72740.1 370 SLLGGCVTLA 379
                 3345555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (395 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       593  (0.0330749); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.22s 00:00:00.70 Elapsed: 00:00:00.38
# Mc/sec: 3092.61
//
Query:       EPX72741.1  [L=116]
Description: hypothetical protein SOCG_00503 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.8e-43  145.5   1.0    7.1e-43  145.2   1.0    1.0  1  MPC       Mitochondrial pyruvate carriers


Domain annotation for each model (and alignments):
>> MPC  Mitochondrial pyruvate carriers
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.2   1.0   3.9e-47   7.1e-43       2     108 ..       6     112 ..       5     114 .. 0.95

  Alignments for each domain:
  == domain 1  score: 145.2 bits;  conditional E-value: 3.9e-47
         MPC   2 lkrflnsetgkktvhFWaPvlkwglviaglsDlkrpaekiSltqnlaLlatgliwtryslvikPkNyllaavnfvlelvglvqvsRilkyrlskkdekk 100
                 ++rf+n+++g+ktvhFWaP++kw+lv++g+sD++r ++ +S +q  aL atg+iwtr+slvi+PkNy+ a+vnf+l++vg+vq+sRi+ y++++k+ k+
  EPX72741.1   6 FSRFWNHPAGPKTVHFWAPAMKWTLVLSGISDYTRAPQYLSTRQYGALAATGAIWTRWSLVIRPKNYFNATVNFFLAVVGGVQLSRIYVYNYQQKRIKA 104
                 89*********************************************************************************************9988 PP

         MPC 101 eakkeike 108
                 + ++e ++
  EPX72741.1 105 NSETEKQK 112
                 86655544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       581  (0.0324056); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 846.68
//
Query:       EPX72742.1  [L=852]
Description: chitin synthase regulatory factor Chr3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.6e-40  135.2  10.8    1.4e-06   28.8   0.2    7.5  7  Sel1      Sel1 repeat
  ------ inclusion threshold ------
       0.11   13.1   0.0       0.28   11.7   0.0    1.7  1  TORC_C    Transducer of regulated CREB activity, C terminus
       0.41   11.4   2.8         19    6.2   1.0    3.9  3  TPR_6     Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> Sel1  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.1   5.8e-07    0.0035       1      38 []     558     594 ..     558     594 .. 0.92
   2 !   18.9   0.0   3.1e-07    0.0018       5      37 ..     599     629 ..     595     630 .. 0.93
   3 !   24.1   0.0   6.8e-09   4.1e-05       2      35 ..     632     664 ..     631     664 .. 0.86
   4 ?    1.1   0.0      0.12   7.1e+02       2      14 ..     672     682 ..     671     689 .. 0.85
   5 !   28.0   0.0     4e-10   2.4e-06       1      38 []     709     745 ..     709     745 .. 0.91
   6 !   16.0   0.1   2.4e-06     0.014       3      34 ..     748     779 ..     746     782 .. 0.83
   7 !   28.8   0.2   2.4e-10   1.4e-06       1      37 [.     784     818 ..     784     819 .. 0.92

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 5.8e-07
        Sel1   1 aeAmyrLGmfylylnGl.gvpkDpekAiewyekAAeqGd 38 
                 aeA++  G  ++y  G  g p+D +kA+e+y ++ ++G+
  EPX72742.1 558 AEALFLIG--QFYSQGVlGFPRDAQKAFELYGLSSKKGH 594
                 79******..666****88*****************998 PP

  == domain 2  score: 18.9 bits;  conditional E-value: 3.1e-07
        Sel1   5 yrLGmfylylnGlgvpkDpekAiewyekAAeqG 37 
                 yr +   ++++G gv +D +k + +y+kAAe++
  EPX72742.1 599 YRAA--VCLQTGIGVRPDARKSVLLYKKAAEMD 629
                 9999..999**********************96 PP

  == domain 3  score: 24.1 bits;  conditional E-value: 6.8e-09
        Sel1   2 eAmyrLGmfylylnGlg.vpkDpekAiewyekAAe 35 
                 eAm+r+G  ++ylnGl   + D+ ++++++e+A+e
  EPX72742.1 632 EAMFRMG--LIYLNGLLnQKIDVPLGLQYLERACE 664
                 8******..777****73555************97 PP

  == domain 4  score: 1.1 bits;  conditional E-value: 0.12
        Sel1   2 eAmyrLGmfylyl 14 
                  Amy L+   +y+
  EPX72742.1 672 RAMYELA--KIYE 682
                 69*****..7666 PP

  == domain 5  score: 28.0 bits;  conditional E-value: 4e-10
        Sel1   1 aeAmyrLGmfylylnGl.g.vpkDpekAiewyekAAeqGd 38 
                 a+A+++LG  +++++Gl + vp  p++ i wy +AAeq++
  EPX72742.1 709 AAAQCKLG--ECFEHGLlDcVPE-PRRSIFWYTRAAEQDY 745
                 68******..*******876777.**************85 PP

  == domain 6  score: 16.0 bits;  conditional E-value: 2.4e-06
        Sel1   3 AmyrLGmfylylnGl.g.vpkDpekAiewyekAA 34 
                 A   L    +yl+G  + +pk+ e+A+ w +kAA
  EPX72742.1 748 AELGLS--GWYLTGAeDiLPKNNEEALLWAHKAA 779
                 555566..566****988999************9 PP

  == domain 7  score: 28.8 bits;  conditional E-value: 2.4e-10
        Sel1   1 aeAmyrLGmfylylnGlgvpkDpekAiewyekAAeqG 37 
                 a A++++G ++  ++G g+ +Dp  A+ wy +AA+qG
  EPX72742.1 784 AQAQFAVGFMM--EHGIGITADPAAAHNWYIRAAKQG 818
                 68******555..***********************9 PP

>> TORC_C  Transducer of regulated CREB activity, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   4.7e-05      0.28      17      66 ..     479     528 ..     468     533 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 4.7e-05
      TORC_C  17 lssalasvpevsldaddl.fplddelklepldldglqmLsdpdmvlaDpav 66 
                 +s a   v+e+++ ++ +  p++ e++l  l ld l+ L++ +  ++Dpa+
  EPX72742.1 479 VSHADVMVAEQNFRKARVaNPIE-EVELAKLYLDALETLENKSSSVPDPAT 528
                 55555567788888877734555.8****************9999*****9 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0     0.081   4.8e+02       1      23 [.     559     586 ..     559     587 .. 0.86
   2 ?    6.2   1.0    0.0031        19       1      30 [.     632     681 ..     632     684 .. 0.83
   3 ?    1.3   0.1      0.11   6.5e+02       2      14 ..     673     685 ..     672     688 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.081
                 HHHHHHHHHHHHH.....HHHHHHHHHH CS
       TPR_6   1 dAlyklalsyrkl.....gdtdkAleal 23 
                 +Al+++++ y ++      d++kA e++
  EPX72742.1 559 EALFLIGQFYSQGvlgfpRDAQKAFELY 586
                 79******99998998888888888877 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.0031
                 HHHHHHHHHHHHH....................HHHHHHHHHHHHHHHH- CS
       TPR_6   1 dAlyklalsyrkl....................gdtdkAlealerlikeY 30 
                 +A+++++l y+++                    ++  +A++a+ +l k Y
  EPX72742.1 632 EAMFRMGLIYLNGllnqkidvplglqyleraceTRRPEAVRAMYELAKIY 681
                 79**********66999888888888888888888888888888887777 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.11
                 HHHHHHHHHHHHH CS
       TPR_6   2 Alyklalsyrklg 14 
                 A+y la+ y++++
  EPX72742.1 673 AMYELAKIYEQTK 685
                 9********9864 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (852 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       797  (0.0444531); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.68u 0.27s 00:00:00.95 Elapsed: 00:00:00.46
# Mc/sec: 5605.79
//
Query:       EPX72743.1  [L=599]
Description: AGC/NDR protein kinase Sid2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.7e-62  211.2   0.0    5.5e-62  209.5   0.0    1.9  2  Pkinase        Protein kinase domain
    4.6e-28   98.2   0.3    5.6e-20   71.7   0.0    2.2  2  Pkinase_Tyr    Protein tyrosine kinase
    7.7e-06   26.5   2.0    1.4e-05   25.6   0.8    2.1  2  Pkinase_C      Protein kinase C terminal domain
     0.0025   17.8   0.3        3.1    7.6   0.0    2.9  3  APH            Phosphotransferase enzyme family
  ------ inclusion threshold ------
       0.04   12.9   0.0       0.13   11.2   0.0    2.1  1  Haspin_kinase  Haspin like kinase domain


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.1       1.4   4.9e+03      85     117 ..     123     156 ..     115     159 .. 0.62
   2 !  209.5   0.0   1.5e-65   5.5e-62       1     264 []     202     502 ..     202     502 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 1.4
                 HHHHHHHHSS.--HHHHHHHHHHHHHHHHHHHHT CS
     Pkinase  85 ladllerkgs.lseeeakkiakqilegleylHsk 117
                 l+++ + k++ ++     +++ + +e l+ylHs+
  EPX72743.1 123 LEKISRPKVKrMATICQMFFLDNYFEQLHYLHSR 156
                 5555554333233333446777888999999987 PP

  == domain 2  score: 209.5 bits;  conditional E-value: 1.5e-65
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HH CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslsee 98 
                 +++++++G+G++G+V  a++++t++ivA+K+++k+   k++e ++vl+E  il + +++ +vrl+++f++ +++yl +e+v+gg++ +ll+++g+l ++
  EPX72743.1 202 FQTITQVGQGGYGSVWLARKRDTKEIVALKIMNKSVLLKMDEiRHVLTERDILTSANSEWLVRLLYAFQDLSNIYLAMEFVPGGDFRTLLSNSGVLRDH 300
                 577899********************************99999******************************************************** PP

                 HHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS......................................BCTTTS CS
     Pkinase  99 eakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk......................................ltsfvg 159
                 +ak++a++++ +++ lH+ g iHrDlKpeN+L+  +g++K+tDFGl++ + s++k                                      ++s+vg
  EPX72743.1 301 HAKFYATEMFLAIDALHKLGYIHRDLKPENFLVGASGHIKLTDFGLSSGIISKQKiesmkirlqdvnnvavpersmrerrqvfrsllaqdpvyAHSVVG 399
                 ****************************************************999******************************************** PP

                 CGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS..-HHHHHHHHHHT-SSGCCSTTHH CS
     Pkinase 160 tseYlAPEvlkeneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeasei..seeakdllkkllkkdpkkRltae 256
                 +++Y+APEvl++++y+ +vD+WslG+ilye l+g ppfsg++ +e ++++l++ +k    ++  + + p++ e+  ++ea d+++ +++    +  + +
  EPX72743.1 400 SPDYMAPEVLRGENYDYSVDYWSLGCILYECLSGFPPFSGSNVNE-TWSNLKNWKK---CFQRPHYDDPRDLEFnwKDEAWDFVTHCITSPAYRYRSLN 494
                 ***************************************888876.7777777555...554334444444444559************99999999** PP

                 HHHTSGGG CS
     Pkinase 257 ellqhpyl 264
                 +++qhpy+
  EPX72743.1 495 QVKQHPYF 502
                 *******8 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.7   0.0   1.6e-23   5.6e-20       3     162 ..     204     359 ..     202     379 .. 0.90
   2 !   24.5   0.1   3.9e-09   1.4e-05     168     227 ..     400     458 ..     383     482 .. 0.87

  Alignments for each domain:
  == domain 1  score: 71.7 bits;  conditional E-value: 1.6e-23
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTS..SHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeea..teeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkeke 98 
                  + +++G+G +G+V+ ++ +    ++++ Va+K+++++   + +e +++l+e +i+++ + + +v+ll +  + +++++ +e+v+gGd+++ L ++   
   EPX72743.1 204 TITQVGQGGYGSVWLARKR----DTKEIVALKIMNKSVllKMDEIRHVLTERDILTSANSEWLVRLLYAFQDLSNIYLAMEFVPGGDFRTLLSNS--G 295
                  56899***********999....89999******887522667799**********************************************997..9 PP

                  TSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEET CS
  Pkinase_Tyr  99 kltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkk 162
                   l+ ++   +a+++  +++ L++  ++Hrdl   N L+  + ++k++DfGL++ i ++++ ++ 
   EPX72743.1 296 VLRDHHAKFYATEMFLAIDALHKLGYIHRDLKPENFLVGASGHIKLTDFGLSSGIISKQKIESM 359
                  999999999********************************************99777776554 PP

  == domain 2  score: 24.5 bits;  conditional E-value: 3.9e-09
                  GGGGS-HHHHHHSEEEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHHHTTEES-BB CS
  Pkinase_Tyr 168 pvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglkneevleklkegkrlekp 227
                  +  +mapE+l+ +++  + D Ws G +l+E ++ g  p++g + +e+ ++lk+ k++ + 
   EPX72743.1 400 SPDYMAPEVLRGENYDYSVDYWSLGCILYECLS-GFPPFSGSNVNETWSNLKNWKKCFQR 458
                  5689*****************************.********999999999887765444 PP

>> Pkinase_C  Protein kinase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       2.3   8.1e+03      31      42 ..      13      24 ..      10      26 .. 0.85
   2 !   25.6   0.8     4e-09   1.4e-05       2      46 .]     523     573 ..     522     573 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 2.3
   Pkinase_C 31 spltssvqenFr 42
                s ++ss +e+F+
  EPX72743.1 13 SKISSSANEKFD 24
                7899******97 PP

  == domain 2  score: 25.6 bits;  conditional E-value: 4e-09
   Pkinase_C   2 esdeDtsNFDpeFTeedprdtppddm.......pagspltssvqenFrGFtY 46 
                 +s+ D  +FD +FT+e+ + ++++ +       +++ + ++ + ++F+GFt+
  EPX72743.1 523 NSEIDAGYFD-DFTNENDMSKYKEVHdkqaaiaRMSNTFNKPKRNAFIGFTF 573
                 79********.******999999999*****9999999999999*******9 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.1    0.0017       6.2      99     173 ..     131     202 ..      73     205 .. 0.62
   2 ?   -0.7   0.0      0.31   1.1e+03       7      84 ..     210     289 ..     204     317 .. 0.56
   3 !    7.6   0.0   0.00087       3.1     164     187 ..     317     339 ..     296     348 .. 0.75

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0017
                 HHHHCCHHCH.-STTTB-SHHCHTCCHHHHHHCHHHCCCGCCTCC.HHHHHHHHHHHHHHHH--S.......SS-EEEE-SS- CS
         APH  99 geflaalhqvdpaalpladflaqdlellrqlesatarllaselld.lleeleeqvlaalaallpg.......elptvllHgDl 173
                 +   a + q+        +fl+ + e+l +l+s+++  + +++++ l+ e +  v+++l+++  g         +t++ HgD+
  EPX72743.1 131 VKRMATICQM--------FFLDNYFEQLHYLHSRKQ--RLHLFEQqLAKEPTN-VRNELEKRYNGrervylrKRRTRISHGDF 202
                 4444444444........7889999*********55..443444422333333.6666666666666677778*********9 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.31
                 -.SSCEEEEEEETT.-.-EEEEEE-TTS-HHHHHHHHHHHHHHHHTT-........B--B-CTTBS-EEETTEEEEEEE----EE-SS CS
         APH   7 ggasnrtylvttpa.g.ryvlrrnpparaaeeirrevallrlLakagv........pvPevlagdtddeeigllfalieyvpgrsllr 84 
                  g +  ++l    + +  ++l++ +++     + ++ ++ ++L ++++         v ++l+     +++   ++++e+vpg ++++
  EPX72743.1 210 QGGYGSVWLARKRDtKeIVALKIMNKS----VLLKMDEIRHVLTERDIltsansewLV-RLLY---AFQDLSNIYLAMEFVPGGDFRT 289
                 555555555555553323336777777....455555555555555554322223223.3333...2233333677888888887776 PP

  == domain 3  score: 7.6 bits;  conditional E-value: 0.00087
                 S-EEEE-SS-SGGGEEEC..TTEE CS
         APH 164 lptvllHgDlhpgNllvdpddgrv 187
                  + + +H+Dl+p N+lv  + g++
  EPX72743.1 317 HKLGYIHRDLKPENFLVG-ASGHI 339
                 46789************9.44554 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   3.7e-05      0.13     212     257 ..     304     350 ..       8     366 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 3.7e-05
  Haspin_kinase 212 fwqivkiLyv.aEtkfeFEHRdLhldniLvdknlnvtlidlklsRle 257
                    f+ +   L++ a  k+ + HRdL+ +n Lv +++++ l d+ ls   
     EPX72743.1 304 FYATEMFLAIdALHKLGYIHRDLKPENFLVGASGHIKLTDFGLSSGI 350
                    5555555554255799999**********************998655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (599 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       609  (0.0339673); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.64u 0.30s 00:00:00.94 Elapsed: 00:00:00.46
# Mc/sec: 3934.36
//
Query:       EPX72744.1  [L=1408]
Description: P-type ATPase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      7e-74  248.7  30.2      7e-74  248.7  30.2    1.9  2  PhoLip_ATPase_C  Phospholipid-translocating P-type ATPase C-t
    7.5e-20   70.4   1.5    2.5e-19   68.7   1.5    1.8  1  PhoLip_ATPase_N  Phospholipid-translocating ATPase N-terminal
      1e-09   38.4   0.0    5.2e-09   36.1   0.0    2.1  2  Cation_ATPase    Cation transport ATPase (P-type)
    9.6e-09   35.8   1.1     0.0003   21.2   0.2    3.3  2  Hydrolase        haloacid dehalogenase-like hydrolase
    8.7e-05   22.1   0.0    0.00035   20.2   0.0    2.0  1  E1-E2_ATPase     E1-E2 ATPase
     0.0043   16.8   0.3       0.01   15.6   0.3    1.6  1  Hydrolase_3      haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> PhoLip_ATPase_C  Phospholipid-translocating P-type ATPase C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   1.3       1.7   5.1e+03     130     130 ..     485     485 ..     444     545 .. 0.41
   2 !  248.7  30.2   2.3e-77     7e-74       1     248 [.    1038    1287 ..    1038    1288 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.7
  PhoLip_ATPase_C 130 f 130
                      +
       EPX72744.1 485 Y 485
                      2 PP

  == domain 2  score: 248.7 bits;  conditional E-value: 2.3e-77
  PhoLip_ATPase_C    1 vraSDyaiaqFrfLkrLLlvhGrwsyrRisklilyffyKnvvftlvqfwfqfyngfsgqslyeswlltlynllftslpvivlgifdqdvsae 92  
                       ++++DyaiaqFr+L++L+lvhGrw y+Ri+++++ ffyK+vv+t+++fwfq+yn+f +++l+++++++l+nl+f+slpviv+g++dqdv+ae
       EPX72744.1 1038 AMSADYAIAQFRYLSKLVLVHGRWDYNRIAQMVNNFFYKSVVWTFTLFWFQIYNNFDANYLFDYTYIMLFNLIFSSLPVIVMGVYDQDVNAE 1129
                       69****************************************************************************************** PP

  PhoLip_ATPase_C   93 lllkyPelYklgqknklfnlktfllwileglyqsliifflsylvlddssfs...dgktndlqlfgtlvftalvlvvnlkvaletktwtlili 181 
                       ++lk+P+lYk+g  + +   + f++++++g+yqs+i+ff+s+lv+++ ++    +++t ++q +g++v+   ++vv  +v+l+  +w+++++
       EPX72744.1 1130 VSLKIPQLYKRGILQLNSARRIFIGYMIDGFYQSVICFFFSFLVINNVTVAaqnGRDTMGMQDLGVYVAAPTIMVVDSYVLLNQANWDVFSV 1221
                       *************9999999************************99988888989999********************************** PP

  PhoLip_ATPase_C  182 ililgsillyflflllyssllpsssefygvleelfsspsfwlvlllvvvvallpdllikvlkrtffp 248 
                        ++ +s++++++++ +ys+++  s efy+ ++++f++p+fw+vl+ +++ +l+p++l+ ++++ f+p
       EPX72744.1 1222 GIWALSCITFWFWTGVYSQSWY-SIEFYKSASRIFRTPNFWAVLFGTIASCLFPKFLFMTVQKLFWP 1287
                       ******************9776.7*****************************************99 PP

>> PhoLip_ATPase_N  Phospholipid-translocating ATPase N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.7   1.5   8.2e-23   2.5e-19      10      56 ..      82     128 ..      71     134 .. 0.89

  Alignments for each domain:
  == domain 1  score: 68.7 bits;  conditional E-value: 8.2e-23
  PhoLip_ATPase_N  10 ekkkyasNkIsTsKYtlltFlpknLfeqFrrvaNlYFLviailqliP 56 
                      +k+ y++NkI+T+KYt l+Flpkn+f qF++vaNl+FL+++ilq+i 
       EPX72744.1  82 AKRFYPRNKIRTAKYTPLNFLPKNIFLQFQNVANLFFLFLVILQCIK 128
                      3569*****************************************96 PP

>> Cation_ATPase  Cation transport ATPase (P-type)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.1   0.0   1.7e-12   5.2e-09      13      87 ..     688     773 ..     676     775 .. 0.78
   2 ?   -2.4   0.0       1.7   5.1e+03      16      28 ..     875     887 ..     868     892 .. 0.86

  Alignments for each domain:
  == domain 1  score: 36.1 bits;  conditional E-value: 1.7e-12
  Cation_ATPase  13 ekdevkllGnktEsALlvlaekl.......gldteelree............tkkvqeipFnssrKrmsvvlklepekkvrlyvKGApeiilkr 87 
                     +  v +  +++E+AL+  a+++               ++            +k +  i F+s rKrmsvv++  p+++++l++KGA  +i++r
     EPX72744.1 688 GDRIVYKAQSPDEAALVGTARDVgfvfldqR-------RDvmvtralgethrFKLLDSIDFTSARKRMSVVIRG-PDNRYVLICKGADSVIYDR 773
                    5556677889*************77666663.......333333334555569999*****************8.9***************987 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.7
  Cation_ATPase  16 evkllGnktEsAL 28 
                     + l+G+k E+A+
     EPX72744.1 875 LWVLTGDKMETAI 887
                    6889********8 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.2   9.9e-08    0.0003       3     151 ..     565     889 ..     563     915 .. 0.81
   2 !   10.0   0.1   0.00026      0.78     174     210 .]     987    1024 ..     972    1024 .. 0.80

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 9.9e-08
                 EEEEESBTTTBCHHHHHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHH.......HHHH.HHHHHETTTE...............HHHHTHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......xxxx.xxxxxxxxxx...............xxxxxxxxxxx RF
   Hydrolase   3 tvvfDkdGTLttgepsvedvivsaalalaaaletgsehpigkalvaaakar.......sgal.tgfatfigrg...............ayaigkpewlt 78 
                  ++ Dk+GTLt+  ++ +++                  p+g+a+++a  ++       s++l  + + fi+r                 +   +  ++ 
  EPX72744.1 565 YIFSDKTGTLTQNVMEFKKCSING-------------VPYGEAFTEAMAGIarregkdSEQLsVEKRSFIDRDrmqmiaqmrntsdnkYLVDENLTFVS 650
                 5889*******9999998866666.............59999999988888855433322222222234444487777776555555322222222222 PP

                 HHHCHHHHHHHHHHHHHHCHHHHHH.......................................................................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx.......................................................................... RF
   Hydrolase  79 aldippdlgaaigsaqsqgrtvall.......................................................................... 103
                 +  + +dl+ + g++qs +  +++l                                                                          
  EPX72744.1 651 S-QFVHDLNGKAGEEQSMACYEFFLalalchsvvadrvgdrivykaqspdeaalvgtardvgfvfldqrrdvmvtralgethrfklldsidftsarkrm 748
                 2.355555555555555555555558888888888888888888888888888889******************************************* PP

                 ...............................................................................................TTHH CS
                 ...............................................................................................xxxx RF
   Hydrolase 104 ...............................................................................................qara 107
                                                                                                                   +
  EPX72744.1 749 svvirgpdnryvlickgadsviydrldpgeqpslqkvtaeqlktfaleglrtlciakrelteeeyfewkekytaassaienreeriaevadliesRLTL 847
                 *****************************************************************************************9999988899 PP

                 HHHHHHHHTHHBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 108 lavftiadplkvkpeaaeavasLkaagievvlltgdnpetaera 151
                  +  +i+d   + +++ +a+a L +agi++++ltgd  eta  +
  EPX72744.1 848 IGGTAIEDR--LQDGVPDAIALLGSAGIKLWVLTGDKMETAINI 889
                 9999999**..****************************99655 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00026
                  TSHHHHHHHHHHHTST.GGGEEEEESSHHHHHHHHHTT CS
                  xxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  174 pspegkvaaireLqgk.peevamVGDgvnDaaalaaAg 210 
                  +sp +k +++   + +    ++++GDg+nD+a++++A+
  EPX72744.1  987 VSPAQKAEVVHLVRDSlDVMTLAIGDGANDVAMIQKAD 1024
                  7788888888888733322499*************997 PP

>> E1-E2_ATPase  E1-E2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.0   1.2e-07   0.00035      15      61 ..     289     340 ..     273     365 .. 0.83

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 1.2e-07
                   -EEEEGGG--TTSEEEEETT-B--SEEEEEEE-S.....EEE-TTTS---S- CS
  E1-E2_ATPase  15 eeeidakelvpGDivllkagdrvpaDgrivegsa.....evdesaLTGEslp 61 
                    +++  k++++GD v++ +++ +paD++i++ s+      +++  L GE   
    EPX72744.1 289 FKKVFWKDIRVGDFVKVSENEEIPADIVILNTSDpegicYIETKNLDGETNL 340
                   5678899************************666555568999999999765 PP

>> Hydrolase_3  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.3   3.4e-06      0.01     205     226 ..    1006    1027 ..     990    1046 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 3.4e-06
                   GEEEEESSGGGHHHHHHSSEEE CS
  Hydrolase_3  205 eviafGDgeNDieMLeaaglgv 226 
                   +++a+GDg ND++M+++a++g+
   EPX72744.1 1006 MTLAIGDGANDVAMIQKADIGI 1027
                   699***************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1408 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       604  (0.0336884); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.93u 0.35s 00:00:01.28 Elapsed: 00:00:00.57
# Mc/sec: 7408.38
//
Query:       EPX72745.1  [L=336]
Description: hydroxymethylbilane synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.4e-66  222.7   0.0    4.5e-66  222.2   0.0    1.2  1  Porphobil_deam   Porphobilinogen deaminase, dipyromethane cof
    3.3e-20   72.2   0.0    5.6e-20   71.5   0.0    1.4  1  Porphobil_deamC  Porphobilinogen deaminase, C-terminal domain


Domain annotation for each model (and alignments):
>> Porphobil_deam  Porphobilinogen deaminase, dipyromethane cofactor binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  222.2   0.0   5.1e-70   4.5e-66       3     203 ..       9     222 ..       7     223 .. 0.93

  Alignments for each domain:
  == domain 1  score: 222.2 bits;  conditional E-value: 5.1e-70
  Porphobil_deam   3 igtRkSkLAlaqaelvaeaLke...eeeveivtiktkGDkildkpLakig...gkglFtkeleeaLlegeidlaVhSlKDlptelpeglelaavl 91 
                     igtRkSkLA++q+e+v ++Lke   e ++ i++ +t GD+il+k+L +++   +k+l+t+ele+ L+ +++ ++VhSlKDlp+e+peg+++a+++
      EPX72745.1   9 IGTRKSKLAVIQSEIVHKQLKEnypEYDFPIISRDTIGDEILSKALFEFKhqvAKSLWTRELEALLIVNQCRMLVHSLKDLPVEMPEGMTIACIP 103
                     9*******************665555559*******************9855569**************************************** PP

  Porphobil_deam  92 kredprDvlvv......kssleelpegavvgTsSlRRkaqlkklrpdlevkdlRGnvdtRlrkldege..ydaiiLAaAGLkRlgleerisevls 178
                     +r+ p D++v+      k s+++lp+g+vvgTsS+RR+a l +++p+l+++d+RGnv tRl+kld+ +  +++++LAaAGL Rlgl++r+s++l+
      EPX72745.1 104 RRNCPLDAIVFpkgspyK-SVANLPSGSVVGTSSIRRRALLARHFPHLRFVDIRGNVGTRLSKLDDPDspFSCLVLAAAGLFRLGLKDRVSQMLT 197
                     ***********8766543.7********************************************977445********************999*9 PP

  Porphobil_deam 179 peellpavgQGalavevrkedeell 203
                         ++avgQGala+evrk+d+e+ 
      EPX72745.1 198 APFNYYAVGQGALAIEVRKDDKEMI 222
                     99999****************9985 PP

>> Porphobil_deamC  Porphobilinogen deaminase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.5   0.0   6.3e-24   5.6e-20       2      74 ..     235     312 ..     234     313 .. 0.92

  Alignments for each domain:
  == domain 1  score: 71.5 bits;  conditional E-value: 6.3e-24
                      HHHHHHHHHHHHTT--TTSSEEEEEEEETTE.....EEEEEEEE-TTS..S-EEEEEEEE.-GGGHHHHHHHHHHHHH CS
  Porphobil_deamC   2 levlaERallkeLeGGCsvPiGvyaeveane....elkLkglvlsldglksaveeaeakg.eleeaeelGkklaeell 74 
                      +++ aERal+k+L+GGC++PiGv+++  a +    +++L+g+v+s dg +sa+    + + ++e+ae+lG ++a  ll
       EPX72745.1 235 YCCVAERALMKRLDGGCAIPIGVQSDSLAVSsssfQVSLDGIVVSADGRRSAFASGNRVInSVEDAEDLGTQVALSLL 312
                      8*************************88555679****************999999988899************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (336 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       443  (0.0247086); expected 358.6 (0.02)
Passed bias filter:                      429  (0.0239277); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.38s 00:00:01.03 Elapsed: 00:00:00.59
# Mc/sec: 1714.99
//
Query:       EPX72746.1  [L=608]
Description: par A family ATPase/WD repeat iron cluster assembly fusion protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.8e-96  320.5   0.0    9.3e-96  320.0   0.0    1.2  1  ParA         NUBPL iron-transfer P-loop NTPase
    3.5e-39  132.1  20.5    2.8e-09   37.4   0.2    7.6  7  WD40         WD domain, G-beta repeat
    6.3e-18   64.9   5.6     0.0032   17.7   0.0    6.2  6  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    2.5e-06   27.6   0.0      2e-05   24.6   0.0    2.2  1  CbiA         CobQ/CobB/MinD/ParA nucleotide binding domain
    7.7e-06   25.9   0.0     0.0036   17.2   0.0    2.5  2  eIF2A        Eukaryotic translation initiation factor eIF2A
    0.00099   18.4   0.1      0.014   14.6   0.0    2.1  2  ArsA_ATPase  Anion-transporting ATPase
      0.003   17.5   0.6       0.04   13.8   0.6    2.3  1  AAA_31       AAA domain
     0.0064   15.9   0.0       0.17   11.2   0.0    2.5  3  WD40_like    WD40-like domain
  ------ inclusion threshold ------
      0.011   15.1   0.0      0.043   13.1   0.0    1.8  1  MipZ         ATPase MipZ
      0.024   14.5   0.1        2.8    7.7   0.0    2.3  2  AAA_26       AAA domain
      0.042   13.4   0.0       0.09   12.3   0.0    1.5  1  AAA_25       AAA domain
      0.093   13.1   0.1       0.19   12.1   0.1    1.4  1  AAA_16       AAA ATPase domain
       0.11   12.2   2.9          7    6.3   0.0    3.4  3  Gmad1        Lipoprotein LpqB beta-propeller domain


Domain annotation for each model (and alignments):
>> ParA  NUBPL iron-transfer P-loop NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  320.0   0.0   6.7e-99   9.3e-96       1     244 [.       3     269 ..       3     271 .. 0.94

  Alignments for each domain:
  == domain 1  score: 320.0 bits;  conditional E-value: 6.7e-99
        ParA   1 kvkkviavlSgKGGVGKStvavnlAlaLa.....kkglkvgllDaDiyGpsiprllg..veeekpeqsekkliPvea...kgikvmSigfllesedeav 89 
                 +v++vi+vlSgKGGVGKS+v+++lAl+L+     ++ lk+g+lD+D++Gpsipr++g  ve+++++qs++++iPv++   k+i +mS+gfll+s++++v
  EPX72746.1   3 QVRHVILVLSGKGGVGKSSVTTQLALSLHdskvhSRPLKIGILDIDLTGPSIPRMFGkdVEQSRIRQSSAGWIPVYTdetKEIGLMSLGFLLPSKKDSV 101
                 599*************************8777778999******************96677788899999*****9988899***************** PP

        ParA  90 vwrGpmkskaikqllkdvewgelDyLiiDlPPGtgDeqltvaqkl..........plagaviVttpqevaladvkkaiemfkkvkvkvlGvveNmsgfv 178
                 vwrGp+k+++i+q+++dv+wgelDyLiiD+PPGtgDe+lt++++l          p++gav+Vttpq +a+ dv+k+i+++kk+++++lG+veNmsgf+
  EPX72746.1 102 VWRGPKKAAMIRQFVSDVHWGELDYLIIDTPPGTGDEHLTIVESLlaetsdvrngPIDGAVMVTTPQALATLDVQKEIDFCKKASIRILGIVENMSGFI 200
                 *********************************************9999999999899***************************************** PP

        ParA 179 cpkcgekteifgkgggeklaeelgvpllgeipldpeireasdegkp...lvlkepeseaakaleeiaek 244
                 cp+c+++t+if++ggg++lae++++p+lg++p+dp++ e+++++++   l +  pe+e++k++  i+++
  EPX72746.1 201 CPHCADCTNIFSSGGGQTLAEKYKIPFLGSVPIDPKFGEMIENQNSstnLSKLYPETEMSKVFFPIVQN 269
                 ***************************************999998744455667889999999998886 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.0     2e-08   2.7e-05       4      38 .]     283     318 ..     280     318 .. 0.89
   2 ?    4.6   0.0     0.047        64       2      36 ..     323     360 ..     322     360 .. 0.71
   3 !   37.4   0.2     2e-12   2.8e-09       1      37 [.     368     405 ..     368     406 .. 0.95
   4 !   24.7   0.2   2.2e-08     3e-05       2      37 ..     414     450 ..     413     451 .. 0.95
   5 !   23.4   0.1   5.7e-08   7.9e-05       6      37 ..     462     494 ..     457     495 .. 0.89
   6 !   11.6   0.0    0.0003      0.42       9      37 ..     529     557 ..     523     558 .. 0.83
   7 !   14.9   0.3   2.7e-05     0.038       9      37 ..     576     605 ..     566     606 .. 0.85

  Alignments for each domain:
  == domain 1  score: 24.8 bits;  conditional E-value: 2e-08
                 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +  l+GH + v+s+a +p  +++asGs D+tvri++
  EPX72746.1 283 VAGLSGHdGRVWSVASHPVLPLFASGSQDKTVRIYN 318
                 55689**666************************98 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.047
                 EEEEEEESS.SS.EEEEEEETTSSE.......EEEEETTSEEEE CS
        WD40   2 qclrtltGH.ss.vtslafspdgaw.......lasGsdDgtvri 36 
                 q++++++G  s  v+ +      aw       la +s Dgt+ i
  EPX72746.1 323 QLVHVIDGFhSRsVRRV------AWrpvdrpiLAVASFDGTISI 360
                 5677777553336****......777777776777788***986 PP

  == domain 3  score: 37.4 bits;  conditional E-value: 2e-12
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 ++c+  l+GH + v ++a+sp g++la++s+D++v iW
  EPX72746.1 368 WECTAALEGHeNEVKCIAWSPGGNYLATCSRDKSVWIW 405
                 689999****999************************* PP

  == domain 4  score: 24.7 bits;  conditional E-value: 2.2e-08
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 +c+ +l  H ++v  +a++p+ ++l+sGs+D t+ +W
  EPX72746.1 414 DCMAVLQEHtQDVKVVAWHPSEDLLVSGSYDDTICFW 450
                 7999*****999************************* PP

  == domain 5  score: 23.4 bits;  conditional E-value: 5.7e-08
                 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   6 tltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                  l GH s v++lafsp+g+ l+s++  g++++W
  EPX72746.1 462 QLQGHqSTVWALAFSPSGSTLVSADNEGNIMLW 494
                 578**777****************99******* PP

  == domain 6  score: 11.6 bits;  conditional E-value: 0.0003
                 SS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   9 GH.ssvtslafspdgawlasGsdDgtvriW 37 
                  H + v+sl++  d+ + ++Gs Dg++ ++
  EPX72746.1 529 VHqGAVYSLSWLNDKVLASAGS-DGKIVVY 557
                 47556****9999999988899.****997 PP

  == domain 7  score: 14.9 bits;  conditional E-value: 2.7e-05
                 SSSS...EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   9 GHss...vtslafspdgawlasGsdDgtvriW 37 
                 +H +   ++s+a+  + +++ sG+dDg  riW
  EPX72746.1 576 AH-DvyeINSIAWLGNDKLV-SGGDDGESRIW 605
                 67.44569***999999996.8********** PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0   0.00086       1.2      35      89 ..     287     341 ..     273     342 .. 0.87
   2 !   14.7   0.0   2.1e-05     0.029       9      65 ..     304     361 ..     297     367 .. 0.88
   3 !   12.6   0.1   9.1e-05      0.12      35      89 ..     375     431 ..     367     432 .. 0.75
   4 !   17.7   0.0   2.3e-06    0.0032       2      65 ..     430     494 ..     429     510 .. 0.87
   5 !   12.8   0.0   8.1e-05      0.11      33      69 ..     526     561 ..     503     564 .. 0.78
   6 ?    4.9   0.1     0.024        33      28      66 ..     565     606 ..     562     608 .] 0.79

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00086
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                  +++d++v s+a +p   l+a + +d +vr++++ + ++vh ++  ++++v  + W
   EPX72746.1 287 SGHDGRVWSVASHPVLPLFASGSQDKTVRIYNSDTLQLVHVIDGFHSRSVRRVAW 341
                  577888999999999999************************9888888999988 PP

  == domain 2  score: 14.7 bits;  conditional E-value: 2.1e-05
  ANAPC4_WD40   9 LiAlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgk.lLavaysdgevrll 65 
                  L+A +++d+ ++++  +  +++++ +  ++++vr +aW+p ++ +Lava  dg++++ 
   EPX72746.1 304 LFASGSQDKTVRIYNSDTLQLVHVIDGFHSRSVRRVAWRPVDRpILAVASFDGTISIN 361
                  899999**********99888888899************977659**********986 PP

  == domain 3  score: 12.6 bits;  conditional E-value: 9.1e-05
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksek..avtclgW 89 
                  +++++ev+++aW+p g+ La    d +v + +  + +    + v +e+   v+ + W
   EPX72746.1 375 EGHENEVKCIAWSPGGNYLATCSRDKSVWIWETTEDDEFDCMAVLQEHtqDVKVVAW 431
                  67899*************************998877655544443333225666666 PP

  == domain 4  score: 17.7 bits;  conditional E-value: 2.3e-06
  ANAPC4_WD40   2 swcptmDLiAlatedgellvfRlngqrvwtl.eedkedsevrsLaWkpdgklLavaysdgevrll 65 
                  +w p+ DL+  ++ d+ +   R +g     + + ++++s+v +La++p+g+ L+ a ++g++ l 
   EPX72746.1 430 AWHPSEDLLVSGSYDDTICFWRDDGDDWALTcQLQGHQSTVWALAFSPSGSTLVSADNEGNIMLW 494
                  8**********************997633224889**************************9886 PP

  == domain 5  score: 12.8 bits;  conditional E-value: 8.1e-05
  ANAPC4_WD40  33 eedkedsevrsLaWkpdgklLavaysdgevrlldaes 69 
                    + +++ v sL+W  ++k+La a sdg++ ++++e+
   EPX72746.1 526 LPHVHQGAVYSLSWL-NDKVLASAGSDGKIVVYESEQ 561
                  46778999******6.679**************9997 PP

  == domain 6  score: 4.9 bits;  conditional E-value: 0.024
  ANAPC4_WD40  28 rvwtl....eedkedsevrsLaWkpdgklLavaysdgevrlld 66 
                  ++w +    e++++  e++s+aW  ++k L+ + +dge r+ +
   EPX72746.1 565 NIWRVsiekENAHDVYEINSIAWLGNDK-LVSGGDDGESRIWH 606
                  57777776555666679**********9.57899999999977 PP

>> CbiA  CobQ/CobB/MinD/ParA nucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.0   1.5e-08     2e-05       1     125 [.       8     244 ..       8     247 .. 0.73

  Alignments for each domain:
  == domain 1  score: 24.6 bits;  conditional E-value: 1.5e-08
                 EEEEESSTTSSHHHHHHHHHHHHHHTT--EEEEE.....EEESSCCCCHHTTEB-HHHH........................................ CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxx........................................ RF
        CbiA   1 iaiastkGGvGKTtlaanLaralarrglrVllvD.....aDpqannlaileglendiep........................................ 54 
                 i++ s+kGGvGK+++++ La +l + + +  +++      D  +++    +g+  ++ +                                        
  EPX72746.1   8 ILVLSGKGGVGKSSVTTQLALSLHDSKVHSRPLKigildIDLTGPSIPRMFGKDVEQSRirqssagwipvytdetkeiglmslgfllpskkdsvvwrgp 106
                 789********************9987655555533300555555554466666665558889999999999999999999999999999999999999 PP

                 ...................................................................CCHCCCHHHHHHCHCHHHH.....EEEEEEEE CS
                 ...................................................................xxxxxxxxxxxxxxxxxxx...xxxxxxxxxx RF
        CbiA  55 ...................................................................dlkrllellealgkkkall...lkiagvvlnr 83 
                                                                                    d+++ + ++++ +++   l    ++ g++   
  EPX72746.1 107 kkaamirqfvsdvhwgeldyliidtppgtgdehltivesllaetsdvrngpidgavmvttpqalatlDVQKEIDFCKKASIR--ILgivENMSGFICPH 203
                 9999999999999999999999999999999999999999999999999999999998888888888555555555444433..122334555666655 PP

                 ESS...-TTCHHHHHHHHHHCTS-EEEEEE--CCHCCCCHHT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        CbiA  84 vdgeneetllkealeelkqrygvpvlgviprdeavaeaparg 125
                      ++   + + ++l ++y++p+lg++p d ++ e ++++
  EPX72746.1 204 CADC-TNIFSSGGGQTLAEKYKIPFLGSVPIDPKFGEMIENQ 244
                 5544.3444455555666666888888888888887777765 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   2.6e-06    0.0036      77     163 ..     306     398 ..     290     407 .. 0.77
   2 !    6.2   0.0     0.006       8.3      44     130 ..     407     494 ..     399     520 .. 0.73

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 2.6e-06
                 EESSSSCEEEEEECS....CEEEEEEEEES--EEEE-TTSSEEE.EE-TTSSS-EEEE...EETT.TTEEEEEEE-TT--EEEE-TTSSEEEEEE- CS
       eIF2A  77 iyGkmpakvslfdlk....vkviskleeqkrNtiffspkgklvl.laGfgnlaGelei...wdvk.kkkkiakaeaanatlvewspdgryvlTatt 163
                   G ++++v +++++    v+vi  +++++   + + p ++ +l +a f    G+++i    d + +++   + ++ +   + wsp g+y++T++ 
  EPX72746.1 306 ASGSQDKTVRIYNSDtlqlVHVIDGFHSRSVRRVAWRPVDRPILaVASF---DGTISInekIDDDwECTAALEGHENEVKCIAWSPGGNYLATCSR 398
                 5799**********77778999999***************976516666...566766222444467777777778888889***********975 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.006
                 SSSTT--EEECCEESSS..EEEEEE-TTSS-EEEEESSSSCEEEEEECS...CEEEEEEEEES..--EEEE-TTSSEEEEE-TTSSS-EEEEE CS
       eIF2A  44 iklkkkksevvelkkegp.ihdvaWspkskefaviyGkmpakvslfdlk...vkviskleeqk..rNtiffspkgklvllaGfgnlaGeleiw 130
                 ++++++++++  l+++ + ++ vaW p+++  +++ G  + ++ ++  +     ++++l+ ++    ++ fsp+g  ++ a     +G++ +w
  EPX72746.1 407 TTEDDEFDCMAVLQEHTQdVKVVAWHPSED--LLVSGSYDDTICFWRDDgddWALTCQLQGHQstVWALAFSPSGSTLVSAD---NEGNIMLW 494
                 56677778888887766559999**99866..6799*********9986445556666665541156789999999999884...34555555 PP

>> ArsA_ATPase  Anion-transporting ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0     1e-05     0.014       3      28 ..       8      33 ..       6      40 .. 0.86
   2 ?    1.2   0.0      0.12   1.7e+02     111     136 ..     110     136 ..      98     146 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1e-05
                 EEEEEESTTSSHHHHHHHHHHHHHHT CS
  ArsA_ATPase  3 vilvgGKGGVGKttvsaatavklsek 28
                 +++++GKGGVGK++v + +a+ l ++
   EPX72746.1  8 ILVLSGKGGVGKSSVTTQLALSLHDS 33
                 6789**************99998665 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.12
                  HHHHHHHHHHHCSSSSEEEEESBS.CC CS
  ArsA_ATPase 111 lsfeellkyvkeeeydvvvlDtaP.TG 136
                  +   +++  v+  e d++++Dt+P TG
   EPX72746.1 110 AMIRQFVSDVHWGELDYLIIDTPPgTG 136
                  56677888888999*********9566 PP

>> AAA_31  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.6   2.9e-05      0.04       2     127 ..       6     133 ..       5     149 .. 0.55

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 2.9e-05
      AAA_31   2 kvIaianqKGGvGKTTtsvnlaaala..klg...kkvLlvDlDpQanattglgiekneiektlyevlieeknikeaii.ktkvenldlipssidLaeae 94 
                 +vI +   KGGvGK+  +++la +l   k      k+ + D+D  + +  ++ + k+  ++++ +          + + +++++++ l+     L + +
  EPX72746.1   6 HVILVLSGKGGVGKSSVTTQLALSLHdsKVHsrpLKIGILDIDLTGPSIPRM-FGKDVEQSRIRQSS-----AGWIPVyTDETKEIGLMSLGFLLPSKK 98 
                 589999****************999833222111466677887665443322.12222222333332.....221111012233334444444444444 PP

      AAA_31  95 ielvelekk.eeilkellekvk.deYDyiiiDcpP 127
                 +++v    k   ++++++++v+  e Dy iiD+pP
  EPX72746.1  99 DSVVWRGPKkAAMIRQFVSDVHwGELDYLIIDTPP 133
                 44444444403444777777763467777777777 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0   0.00013      0.17      14      69 ..     304     362 ..     292     386 .. 0.77
   2 ?    1.7   0.0     0.093   1.3e+02       2     138 ..     380     538 ..     379     554 .. 0.67
   3 ?   -0.9   0.0      0.59   8.1e+02      50     104 ..     539     602 ..     524     608 .] 0.52

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00013
   WD40_like  14 lilyGgkddkctvlkleslesvsivesfe.dSvifvkl..ldddlilvvtlDGtillsl 69 
                 l++ G++d+++++++ ++l++v ++++f+  Sv  v    +d   + v++ DGti+   
  EPX72746.1 304 LFASGSQDKTVRIYNSDTLQLVHVIDGFHsRSVRRVAWrpVDRPILAVASFDGTISINE 362
                 7899************************6269988755227777999********7543 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.093
   WD40_like   2 eiYsidiskkgslilyGgkddkctvlkleslesvsivesfedSvifvkll....dddlilvvtlDGtillslleneeevenekieedistvkvi..... 91 
                 e+  i  s+ g++++  ++d+ + + ++  +++   ++ +++  + vk++    ++dl++ ++ D ti       ++   + +++   stv  +     
  EPX72746.1 380 EVKCIAWSPGGNYLATCSRDKSVWIWETTEDDEFDCMAVLQEHTQDVKVVawhpSEDLLVSGSYDDTICFWRDDGDDWALTCQLQGHQSTVWALafsps 478
                 566677778888888888888888888888888888888888888888773333355677777888874433333344445555555555543211121 PP

   WD40_like  92 ddklliGtnkGsiyvfskdlqleevllgqsseIkeikie.............nnkiysLs 138
                 +  l+   n+G+i ++ k +++e   ++ s++I+  + +             ++ +ysLs
  EPX72746.1 479 GSTLVSADNEGNIMLWTKTFSNESEAINNSTNILRPSLQeewvrkatlphvhQGAVYSLS 538
                 455666678888888888888888888888888876666567777777777777777776 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.59
   WD40_like  50 lldddlilvvtlDGtillsllenee....evenekie.e...distvk.viddklliGtnkGsi 104
                  l+d+++  +  DG+i+ +  e+ +     v++ek +     +i  +    +dkl+ G++ G+ 
  EPX72746.1 539 WLNDKVLASAGSDGKIVVYESEQHDdniwRVSIEKENaHdvyEINSIAwLGNDKLVSGGDDGES 602
                 4555566667778888665554433445533333322121112332221336777777777765 PP

>> MipZ  ATPase MipZ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   3.1e-05     0.043       1      59 [.       6      69 ..       6     152 .. 0.59

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 3.1e-05
                EEEEE--SSTTSSHHHHHHHHHHHHHT.....TT--EEEEE--TTT-HHHHHHHHHHHHHHHHT CS
        MipZ  1 hvivlgnekGGsGksttavhvavaLlk.....kGarvaaidldlrqrtlarylenraataerkg 59
                hvi +   kGG Gks ++  +a +L +     + ++++ +d+dl   ++ r ++  +++ + ++
  EPX72746.1  6 HVILVLSGKGGVGKSSVTTQLALSLHDskvhsRPLKIGILDIDLTGPSIPRMFGKDVEQSRIRQ 69
                7999999*****************976222225679**********999999987766554332 PP

>> AAA_26  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.1     0.024        32       2      32 ..       7      35 ..       6      46 .. 0.82
   2 ?    7.7   0.0     0.002       2.8     147     194 ..     177     237 ..     160     240 .. 0.73

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.024
      AAA_26  2 tifvtgtdtgvGKTvvslgLvralkrkgvkv 32
                 i+v +   gvGK++v++ L+ +l++  +kv
  EPX72746.1  7 VILVLSGKGGVGKSSVTTQLALSLHD--SKV 35
                588889999************99954..443 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.002
      AAA_26 147 ltiealrqknvrvlGvilNk....vrnp..e.........nvetlekksgipvlGvvPylpdl 194
                   i+++++  +r+lG++ N     +  p  +           +tl +k +ip lG+vP +p+ 
  EPX72746.1 177 KEIDFCKKASIRILGIVENMsgfiC--PhcAdctnifssgGGQTLAEKYKIPFLGSVPIDPKF 237
                 568899999********99755432..33423455666668889999999********99875 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   6.5e-05      0.09      32      57 ..       5      30 ..       2      52 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 6.5e-05
      AAA_25 32 agelallaGapgtGKttlaldlalav 57
                ++ + +l G +g+GK+ ++++lal++
  EPX72746.1  5 RHVILVLSGKGGVGKSSVTTQLALSL 30
                577889*****************997 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   0.00014      0.19      25      52 ..       7      34 ..       2      51 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00014
      AAA_16 25 elvllsGesGvGKsslvrellralekdg 52
                 +++lsG  GvGKss+ ++l+ +l +++
  EPX72746.1  7 VILVLSGKGGVGKSSVTTQLALSLHDSK 34
                5799***************998888775 PP

>> Gmad1  Lipoprotein LpqB beta-propeller domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.1      0.39   5.3e+02     158     183 ..     417     442 ..     372     446 .. 0.83
   2 ?    6.3   0.0    0.0051         7       4      73 ..     450     517 ..     448     531 .. 0.88
   3 ?    3.7   0.1     0.032        44     130     191 ..     546     606 ..     543     608 .] 0.79

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.39
       Gmad1 158 alatglleeavsvsWrsedtLvVlrs 183
                 a+  + ++++  v+W  +++L+V +s
  EPX72746.1 417 AVLQEHTQDVKVVAWHPSEDLLVSGS 442
                 55666677888899999999999887 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0051
       Gmad1   4 vsvsggrvepvpGplgegavdlrsaAvSrdgqqvaavtapdggrtLvvgsyggeasevleggsltrpSwd 73 
                 ++++g++ + +   +g+ + ++ ++A S++g+++++ + ++g+  L++ +  +e + + + ++++rpS +
  EPX72746.1 450 WRDDGDDWALTCQLQGHQS-TVWALAFSPSGSTLVSAD-NEGNIMLWTKTFSNESEAINNSTNILRPSLQ 517
                 7888888888888889888.999************999.99999999999999999999*********86 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.032
       Gmad1 130 vekdgggkvyvavVvrdadGqksltapvalatglleeavsvsWrsedtLvVlrsseggpvqa 191
                 ++  ++gk++v   ++ +d   +++ + + a++   e+ s++W+++d+Lv  +++ ++ +++
  EPX72746.1 546 ASAGSDGKIVVYESEQHDDNIWRVSIEKENAHD-VYEINSIAWLGNDKLVSGGDDGESRIWH 606
                 556678999999999999996677777777766.66999***********998888887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (608 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       537  (0.0299515); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.71u 0.30s 00:00:01.01 Elapsed: 00:00:00.49
# Mc/sec: 3697.48
//
Query:       EPX72747.1  [L=120]
Description: 40S ribosomal protein S26 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.1e-53  178.8   9.1    3.6e-53  178.6   9.1    1.0  1  Ribosomal_S26e  Ribosomal protein S26e
  ------ inclusion threshold ------
       0.18   12.2   0.9        0.3   11.5   0.8    1.4  1  SF1-HH          Splicing factor 1 helix-hairpin domain


Domain annotation for each model (and alignments):
>> Ribosomal_S26e  Ribosomal protein S26e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.6   9.1     4e-57   3.6e-53       1     106 [.       1     106 [.       1     108 [. 0.98

  Alignments for each domain:
  == domain 1  score: 178.6 bits;  conditional E-value: 4e-57
                     X--S-SSTT----S-S---EEE-TTT--EEES----EEEEEEESS-SSSHHHHTTSBSSSS----EEEEEEE--HHHHHHTTSS----TTTTS-- CS
  Ribosomal_S26e   1 mtkKRrnngrnkkgrghvkivrCsncarlvpkdKaikrfvvrniveaaavrdlseasvyeeyalPklYiklaycvscaihskvvrvRsredrknr 95 
                     mt+KRrn grnk+grghvk+vrC nc+r+vpkdKaikr+++rn+ve+aa+rd+seasvy+ey++PklY+kl+ycvscaihs+vvrvRsr++r++r
      EPX72747.1   1 MTQKRRNCGRNKHGRGHVKFVRCINCSRAVPKDKAIKRWTIRNMVETAAIRDMSEASVYSEYTIPKLYVKLQYCVSCAIHSRVVRVRSRDGRRIR 95 
                     9********************************************************************************************** PP

                     S-S---XXX.. CS
  Ribosomal_S26e  96 eppkrvrkkke 106
                     +pp+rvr +++
      EPX72747.1  96 TPPPRVRYNRD 106
                     ******99875 PP

>> SF1-HH  Splicing factor 1 helix-hairpin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.8   3.3e-05       0.3      58      79 ..      89     112 ..      46     117 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 3.3e-05
      SF1-HH  58 e..eeeRspSPpPvYdanGkRtnt 79 
                 +  ++ R p P   Y+++GkR+n 
  EPX72747.1  89 RdgRRIRTPPPRVRYNRDGKRVNP 112
                 24578899999999*********6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       612  (0.0341346); expected 358.6 (0.02)
Passed bias filter:                      421  (0.0234815); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.27s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 842.12
//
Query:       EPX72748.1  [L=131]
Description: 60S ribosomal protein L14 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.2e-29  100.9   1.1      1e-28   99.6   1.1    1.6  2  Ribosomal_L14e  Ribosomal protein L14
    0.00052   19.9   1.9    0.00096   19.0   1.9    1.5  1  KOW             KOW motif


Domain annotation for each model (and alignments):
>> Ribosomal_L14e  Ribosomal protein L14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0      0.53   4.7e+03      62      66 ..       4       8 ..       1      27 [. 0.74
   2 !   99.6   1.1   1.1e-32     1e-28       1      75 []      47     121 ..      47     121 .. 0.99

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.53
  Ribosomal_L14e 62 FdRFk 66
                    F+RF 
      EPX72748.1  4 FERFV 8 
                    88884 PP

  == domain 2  score: 99.6 bits;  conditional E-value: 1.1e-32
  Ribosomal_L14e   1 pRqaiplkrlkLtkivlklprgartgavkkawekadveekwaksawakklaarekraaltDFdRFkvmvakkqrr 75 
                     pRq+++l +++Lt+iv+++prga+tg+v+k+w++++++ekwa++awakkl+  ++r++l DF+RF v + kkqrr
      EPX72748.1  47 PRQIVRLGQVTLTSIVMDVPRGATTGIVAKKWQAQNISEKWAATAWAKKLETVKTRSQLGDFERFAVLRYKKQRR 121
                     8************************************************************************97 PP

>> KOW  KOW motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   1.9   1.1e-07   0.00096       1      32 []      10      40 ..      10      40 .. 0.97

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 1.1e-07
                TTSEEEESSSTTTTCEEEEEEEETTTTEEEEE CS
         KOW  1 pGdhVkVvsGphkGktGkVvkvdqhkvrVfvd 32
                +G++V    Gp kG  + +v++ +hk rV+vd
  EPX72748.1 10 VGRVVLLKNGPQKGTLAAIVDIVDHK-RVIVD 40
                79************************.***98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       618  (0.0344693); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 972.30
//
Query:       EPX72749.1  [L=126]
Description: DUF1763 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       519  (0.0289475); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.27s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 989.51
//
Query:       EPX72750.1  [L=389]
Description: nicotinamide mononucleotide adenylyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.6e-30  104.2   0.0    9.3e-30  103.7   0.0    1.2  1  CTP_transf_like  Cytidylyltransferase-like
  ------ inclusion threshold ------
       0.97    7.0   8.2        1.2    6.7   8.2    1.0  1  TALPID3          Hedgehog signalling target


Domain annotation for each model (and alignments):
>> CTP_transf_like  Cytidylyltransferase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.7   0.0     1e-33   9.3e-30       1     141 [.     152     342 ..     152     344 .. 0.90

  Alignments for each domain:
  == domain 1  score: 103.7 bits;  conditional E-value: 1e-33
                      EEEE--TT--HHHHHHHHHHHHHSSES....EEEEEESSTHCSST-SCSSTHHHHHHHHHHH.TTCTTEEEEEEESEHH............... CS
  CTP_transf_like   1 lagGtFDpiHlGHlrlleqakklleed....livgvpsdeppkkkkkplasaeeRlemlela.kevdevisvdpweltr............... 74 
                      +a+G++ pi++ Hlr++e+a + ++e+    li g  s++++++kk++la++++R++m+ela ++++++++vd we+ +               
       EPX72750.1 152 VACGSYSPITYLHLRMFEMATDTIHEQtnmeLIAGYFSPVNDDYKKEGLAPSHHRVRMCELAcERTSSWLMVDAWESLQkkytrtaevldhfde 245
                      69****************************9999989999999889********************************************7776 PP

                      .HHHHHTTT........T......EEEEEEEHHHHHHHHCHH.....HHHHHHHHHHHEEEEEE...............HTTCEEEEEEECCTT CS
  CTP_transf_like  75 .evlkklkp........d......klylvigadvledfsewk.....eleeilgnvklvvvsrp...............ekqanvllkaekrtn 133
                             +         d      k++l++g+d+++++ e+      +l++ilgn+++v+v+r+                ++ nvl++++ ++n
       EPX72750.1 246 eI-----NKkrggirlsDgsrrpcKIMLLAGGDLIASMGEPGvwsesDLHHILGNFGCVIVERTgsdvwafllahdllfAYRGNVLVIKQLIYN 334
                      42.....332222455425567889************9887799999********************************9************** PP

                      TCSHHHHH CS
  CTP_transf_like 134 giSstkir 141
                      +iSstk+r
       EPX72750.1 335 DISSTKVR 342
                      *******9 PP

>> TALPID3  Hedgehog signalling target
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   8.2   0.00013       1.2     948    1031 ..      19      99 ..       1     106 [. 0.61

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.00013
     TALPID3  948 llptPvptPqptppqsPpssekelspvktPdsSpseseadgavsskekeaekgadtspaktlvktPvvtPvatPpkvatpsppl 1031
                    ptP ptPq tp ++ ps+  ++  +k  +s +s+s+ +  ++ ++   +++a    +   ++ P+vt +  P++   ps  +
  EPX72750.1   19 EKPTPGPTPQQTPANTRPSTPANKPDLKSQKSEQSQSSGE-YSPDEDWLGDHAA--REHEARIRRPSVTRAWVPQNTGGPSIQQ 99  
                  2358888888888888666555565666555444444443.3333333333333..468888999**99999999998888655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (389 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       525  (0.0292822); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.44
# Mc/sec: 2646.22
//
Query:       EPX72751.1  [L=394]
Description: hypothetical protein SOCG_00513 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.7e-44  149.7   0.2    1.2e-43  149.0   0.2    1.4  1  DEAD          DEAD/DEAH box helicase
    3.2e-34  117.6   0.1    6.1e-33  113.5   0.0    2.7  3  Helicase_C    Helicase conserved C-terminal domain
    0.00096   18.9   0.0     0.0018   18.0   0.0    1.4  1  AAA_30        AAA domain
     0.0023   18.0   0.0      0.005   16.9   0.0    1.6  1  ResIII        Type III restriction enzyme, res subunit
     0.0039   17.5   0.3      0.013   15.8   0.0    2.0  2  AAA_19        AAA domain
  ------ inclusion threshold ------
      0.016   14.0   0.0       0.83    8.3   0.0    2.3  3  UTP25         Utp25, U3 small nucleolar RNA-associated SSU pr
      0.053   13.8   0.1       0.57   10.4   0.0    2.3  2  AAA_22        AAA domain
      0.054   12.9   0.0       0.11   11.9   0.0    1.4  1  TniB          Bacterial TniB protein
      0.059   12.5   0.0       0.55    9.4   0.0    2.0  2  DUF3419       Protein of unknown function (DUF3419)
       0.12   11.7   0.0       0.23   10.7   0.0    1.4  1  tRNA-synt_1b  tRNA synthetases class I (W and Y)


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.0   0.2   6.5e-47   1.2e-43       2     174 ..      46     209 ..      45     211 .. 0.95

  Alignments for each domain:
  == domain 1  score: 149.0 bits;  conditional E-value: 6.5e-47
                 HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCSE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   2 diQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvdi 100
                 ++Q++ai +i +g+dv+++a+ G+GKT+ f+i +lq++    + + ++ali++PtreLa q+ n +  ++++++++++++igg++  ++++kld g ++
  EPX72751.1  46 AVQSRAITQICKGRDVIAQAQSGTGKTATFSIGILQSID--LSVRDTQALILSPTRELAVQIQNVVLALGDHMNVQCHACIGGTSVGNDIKKLDYGQHV 142
                 69************************************4..588888**************************************************** PP

                 EEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 101 vvgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkdvk 174
                 v gtpgr+ d++++++l++++v++l+lDEad+ll+qgf+++i  i + lp      +   qv+v+SATlp+dv 
  EPX72751.1 143 VSGTPGRVTDMIRRRNLRTRNVKMLILDEADELLNQGFKEQIYDIYRYLP------P-GTQVVVVSATLPQDVL 209
                 *************************************************4......4.446*********9985 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.66   1.2e+03       8      30 ..      81     106 ..      76     137 .. 0.64
   2 ?   -0.5   0.0      0.87   1.6e+03      32      74 ..     188     227 ..     150     231 .. 0.67
   3 !  113.5   0.0   3.4e-36   6.1e-33       2     111 .]     247     355 ..     246     355 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.66
                 HHHHHTTTTSEEEEEESSHH...HHH CS
  Helicase_C   8 ellkleeeggkilifvntid...rle 30 
                 + ++l++++ ++li ++t++   +++
  EPX72751.1  81 QSIDLSVRDTQALILSPTRElavQIQ 106
                 4457789999********99633332 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.87
                 HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESG CS
  Helicase_C  32 vklllekkgikvavlhgelpqnereeileqfnkgesdvLiatd 74 
                  ++l    g +v+v+ ++lpq+  +e+ ++f ++ +++L+  d
  EPX72751.1 188 YRYL--PPGTQVVVVSATLPQD-VLEMTSKFTSDPVRILVKRD 227
                 2444..4478888888877765.57888888888888888655 PP

  == domain 3  score: 113.5 bits;  conditional E-value: 3.4e-36
                 HHHHHHHHHHHTTTTSEEEEEESSHHHHHH.HHHHHHHT...TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSS CS
  Helicase_C   2 kleallellkleeeggkilifvntidrlek.vklllekk...gikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprn 96 
                 k+++l++l+  +    +++if+n++++++  ++         +++va +hge+pq+er+ i+++f++g+s+vL++td+ +rGid+++v+lVin+dlp+n
  EPX72751.1 247 KFDTLCDLY-DTLTITQAVIFCNSRRKVDWlAEK----MreaNFTVASMHGEMPQKERDTIMQDFRQGNSRVLLCTDIWARGIDVQQVSLVINYDLPTN 340
                 677888887.788999************655555....33357******************************************************** PP

                 HHHHHHHHTTSSSTT CS
  Helicase_C  97 vtsyiqriGRtgRag 111
                  ++yi+riGR gR+g
  EPX72751.1 341 RENYIHRIGRSGRFG 355
                 *************86 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0     1e-06    0.0018       4      99 ..      46     174 ..      44     201 .. 0.66

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 1e-06
      AAA_30   4 aeQaaavealltsgdrvavltGpAGtGKtta..lkalreaweaa.ggrviglAptgkaAkvLa....................eelgieastiakllkr 79 
                 a Q++a++++++++d  +++++  GtGKt +  ++ l+ +  +    + ++l+pt + A +++                    +               
  EPX72751.1  46 AVQSRAITQICKGRD--VIAQAQSGTGKTATfsIGILQSIDLSVrDTQALILSPTRELAVQIQnvvlalgdhmnvqchaciggT--------------- 127
                 67************9..9**********865116667777777768999*************9444444433333332222221............... PP

      AAA_30  80 lk............................grarlepgtllivDEagm 99 
                                               +  r ++ ++li DEa  
  EPX72751.1 128 -SvgndikkldygqhvvsgtpgrvtdmirrRNLRTRNVKMLILDEADE 174
                 .02223333334444666777777777765334444459999999965 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   2.8e-06     0.005       8     168 ..      48     203 ..      42     206 .. 0.62

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 2.8e-06
                 HHHHHHHHT......TTSEEEEEESTTSTHHHHH.HHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG........GEEEESSS-B--..... CS
      ResIII   8 QeeaienlleklkskrdkrglikmaTGtGKTlva.aklierllkkgkeekflflvprkslleqtleefkkflseayke....igkkvsgdkkkakekds 101
                 Q +ai+++       + + ++ ++  GtGKT +  + + +++  + +  ++l+l p+++l  q ++ +  + +  + +    ig+   g+  k+     
  EPX72751.1  48 QSRAITQIC------KGRDVIAQAQSGTGKTATFsIGILQSIDLSVRDTQALILSPTRELAVQIQNVVLALGDHMNVQchacIGGTSVGNDIKK----L 136
                 666666665......345699999*********99*****************************988876666655445544444333333333....4 PP

                 ..-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS.TTTHHH...HHT---.SEEEEEESS CS
      ResIII 102 tnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgakkswrei...lekfke.avllglTAT 168
                 +  + +v+ +     d+      +  l+  + +++i DEa  l  + + ++i    +++++   ++ ++AT
  EPX72751.1 137 DYGQHVVSGTPGRVTDM----IRRRNLRTRNVKMLILDEADELLNQGFKEQIydiYRYLPPgTQVVVVSAT 203
                 44444444444444444....13333444444488888887777753333342114444444444555666 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   7.4e-06     0.013       1     114 [.      48     175 ..      48     201 .. 0.63
   2 ?   -0.9   0.1         1   1.8e+03      44      78 ..     262     312 ..     250     389 .. 0.47

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 7.4e-06
      AAA_19   1 qreave.alkekvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAakelrerlaalgae.atTiHrlal.................ldf 80 
                 q +a++  +k + ++  a  GtGKT +    +   ++l  ++  + l++++t+  a ++++ + alg +    +H+  +                 +  
  EPX72751.1  48 QSRAITqICKGRDVIAQAQSGTGKTATFSIGILQSIDLSVRD-TQALILSPTRELAVQIQNVVLALGDHmNVQCHAC-IggtsvgndikkldygqhV-- 142
                 7788876999999999*************9999999999665.9****************99977776653334543.1233434333332222220.. PP

      AAA_19  81 ddlltealelle........eaeeekklqeee..llivDEfqdv 114
                                     +  ++++l+ ++  +li DE+ ++
  EPX72751.1 143 -----------VsgtpgrvtDMIRRRNLRTRNvkMLILDEADEL 175
                 ...........033333343222222222222247777777654 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 1
      AAA_19  44 eillvaftgrAakelrerlaalgaeatTiHrlal.................l 78 
                 + ++ +  +r ++ l+e++++++     +H+  +                  
  EPX72751.1 262 QAVIFCNSRRKVDWLAEKMREANFTVASMHGE-MpqkerdtimqdfrqgnsR 312
                 55566666666666666665555555555543.2233333333333333330 PP

>> UTP25  Utp25, U3 small nucleolar RNA-associated SSU processome protein 25
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.017        31      38      98 ..      51     112 ..      25     121 .. 0.84
   2 ?   -4.0   0.0       2.6   4.7e+03     192     207 ..     164     179 ..     152     183 .. 0.60
   3 ?    8.3   0.0   0.00047      0.83     345     416 ..     275     344 ..     249     355 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.017
       UTP25  38 alnHvlktrdrvlknneklaklke.ssddlelrdqgftrpkvLillptreaalevvelllkl 98 
                 a+  ++k rd +++ ++ + k++  s   l+  d +   ++ Lil ptre a+++ + +l l
  EPX72751.1  51 AITQICKGRDVIAQAQSGTGKTATfSIGILQSIDLSVRDTQALILSPTRELAVQIQNVVLAL 112
                 5677899999999999999988877888888889999999*************987776654 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 2.6
       UTP25 192 iEvlivdqadvlemQn 207
                 + +li+d+ad l  Q 
  EPX72751.1 164 VKMLILDEADELLNQG 179
                 3455555555555554 PP

  == domain 3  score: 8.3 bits;  conditional E-value: 0.00047
       UTP25 345 rvrnylkeekvsfaaiseysskkevsraRelFfkgkkkvlLyteRlhffrRykikgvkkvilYklPenpefy 416
                  + + ++e++++ a+++ +  +ke     + F +g+ +vlL t+   + r  +++ v+ vi Y+lP+n e y
  EPX72751.1 275 WLAEKMREANFTVASMHGEMPQKERDTIMQDFRQGNSRVLLCTD--IWARGIDVQQVSLVINYDLPTNRENY 344
                 566788999999999999999**********************9..56799*****************9877 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.39   6.9e+02      12      21 ..      65      74 ..      61      81 .. 0.87
   2 ?   10.4   0.0   0.00032      0.57      84     117 ..     157     189 ..     128     209 .. 0.69

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.39
      AAA_22 12 GesGtGKTtl 21
                ++sGtGKT +
  EPX72751.1 65 AQSGTGKTAT 74
                689*****87 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00032
      AAA_22  84 qalraravielliiDEaqhlrs...eealeeLrslln 117
                 ++lr+r v ++li+DEa+ l +   +e++ ++   + 
  EPX72751.1 157 RNLRTRNV-KMLILDEADELLNqgfKEQIYDI---YR 189
                 45666666.**********5441344444444...33 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0     6e-05      0.11     113     139 ..     157     183 ..     141     203 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 6e-05
        TniB 113 rllrelkvrvLiiDEihnllagsarkq 139
                 r lr+ +v++Li+DE ++ll+   ++q
  EPX72751.1 157 RNLRTRNVKMLILDEADELLNQGFKEQ 183
                 679*****************7666554 PP

>> DUF3419  Protein of unknown function (DUF3419)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.0   0.00031      0.55     288     358 ..     153     222 ..     140     236 .. 0.77
   2 ?    0.8   0.0      0.12   2.2e+02     327     364 ..     261     298 ..     243     308 .. 0.75

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00031
     DUF3419 288 vlarlkkkslt.ravllDhmDWledeeleeeiqelnralkpggrvllRsaaeepwyakrfeklgFkvkavaa 358
                 +++r + ++ + ++ +lD  D l ++ ++e+i  + r l pg++v++ sa++ +++++    ++F++++v++
  EPX72751.1 153 MIRRRNLRTRNvKMLILDEADELLNQGFKEQIYDIYRYLPPGTQVVVVSATLPQDVLEMT--SKFTSDPVRI 222
                 5554444443315778999999989****************************9999998..6666665554 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.12
     DUF3419 327 pggrvllRsaaeepwyakrfeklgFkvkavaaresgee 364
                 +++ ++  s+ +  w+a+++++++F+v++++   +++e
  EPX72751.1 261 TQAVIFCNSRRKVDWLAEKMREANFTVASMHGEMPQKE 298
                 45667788999999************999999887773 PP

>> tRNA-synt_1b  tRNA synthetases class I (W and Y)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00013      0.23      31     119 ..     275     364 ..     269     376 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00013
                   HHHHTTSEEEEEEEHHHHHTTTTT.-SSHHHHHHHHHHHHHHHHHHHHHTCHTTTEEEEETHHHHTTH.HHHHHHHHHHTTCBHHHHHHHH CS
  tRNA-synt_1b  31 elqkaghevffliaDlhAiigdps.kaeerklrkreevlenaikaqlakgldpekaevvlqsewlehl.elaellrdlgklgslnrmlqfk 119
                   +l ++  e+ f +a +h+ + +++ ++ ++++r+ + ++      + a+g+d++++++v++++ + +  +++  + + g++g+    ++f 
    EPX72751.1 275 WLAEKMREANFTVASMHGEMPQKErDTIMQDFRQGNSRVLLC-TDIWARGIDVQQVSLVINYDLPTNReNYIHRIGRSGRFGRKGVAINFV 364
                   6677778999*********99999888999999988888887.89*******************987658999999999988877776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (394 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       590  (0.0329076); expected 358.6 (0.02)
Passed bias filter:                      510  (0.0284455); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 2730.04
//
Query:       EPX72752.1  [L=3660]
Description: transcription-associated protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.3e-66  224.4   8.8    4.8e-66  223.3   8.8    1.6  1  FAT             FAT domain
    8.7e-33  114.2   2.1    1.5e-32  113.4   0.5    2.3  2  PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
    7.3e-10   38.5   3.0    1.1e-07   31.6   1.3    2.7  2  FATC            FATC domain
  ------ inclusion threshold ------
       0.37   11.1   1.7        3.4    8.1   0.0    3.3  3  TPR_8           Tetratricopeptide repeat
        1.1    9.6   4.1        9.7    6.6   0.0    4.3  4  RasGEF_N_2      Rapamycin-insensitive companion of mTOR RasGE


Domain annotation for each model (and alignments):
>> FAT  FAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  223.3   8.8   1.3e-69   4.8e-66       2     346 .]    2627    2979 ..    2626    2979 .. 0.94

  Alignments for each domain:
  == domain 1  score: 223.3 bits;  conditional E-value: 1.3e-69
                  CCTTCCCCTSSSGHHCCCCT..............TSSSS--CCCHCCCCHH--CCHCHHCCCHCCCCCCCCCTS---SCCCCCHHHHHCCCCCHHHC CS
         FAT    2 plaaeaaWrlgqWdsmeeylsvlk..........kdspdkaffeailalhrnqfdeakeliekarqlldtelsalvgesynraygvlvrvQmlaEle 88  
                  +l +e+aWr  +W+  ++++++            +++ d  +f +   l +n ++e+ ++i +  q   + +++l++++ +++ ++l+++Q laE++
  EPX72752.1 2627 ELYVESAWRILDWKTDRDKIEKQVkslsplvslrRHTSDALLFLTSGDLKTNSVNEFTKIIHESMQFSLRRWQQLPKRIFQSHAPLLHHFQELAEMQ 2723
                  5889*********99555554333355596666666666666666666999********************************************** PP

                  HHCCHHCSS-.........---TTTTTTT----TTS-TTTGCCCTTTCCCCTCCCHCCCHC........................HCCS-STTCCC. CS
         FAT   89 eiiqykqkls.........sseklksllktWrkRlpgcqdnvevwqdiltvRslvlspied........................llkgvkaemwl. 151 
                  e+ +++ +l+         ++++ k +l+ Wr+Rlp+++d+++ w+d++++R++v++ i++                        l++g+++ +w+ 
  EPX72752.1 2724 EAYNIYVQLEsttaenldsKLQEIKVILQSWRERLPNIWDDIDCWSDLVSWRKIVFKDINNvflplasalqqapngtsngnstsyLYRGYHELAWIi 2820
                  ****9999999*******99***************************************************************************** PP

                  .CCCCCHCHHHHCCSTTHHCCCCCHCTT.....TT.TSSCCCHHHHHHHCCHHHHHSSCCHHHHCCTSSCCCSS-SS---............HH.HH CS
         FAT  152 .kfanlarksgrlslAekaLkelleedpeewlprappevvyaylKylwssgeqkealqkLreftsellekkeelqsgleaqkeptnleeftkll.ar 246 
                   +fa++ar ++ +++++++L+++                      y+++++e++ea++kLre++++++e ++e+  gle++ ++tnl++f++ + a+
  EPX72752.1 2821 nRFAHVARVQHLPEVCISQLTKI----------------------YTLPNIEIQEAFLKLREQAKCHYEYPSEMHLGLEVI-NNTNLMYFRNPQkAE 2894
                  ***********************......................************************************.*************** PP

                  CCCTCCCCCCCCCCCT.S...-SSCCHHHHCCHHCTCCCHSTTCCCCHHHHHCCHHHHHHSSSS.S-TCCHHHHCCT..CCHHHHTTTS.STTTCHH CS
         FAT  247 cylkkGewqealqkldwseekieeilqsysaateidpswykawhtwalfnfevvskeeeqkeeeepedlqeyvvpavkgflksislsse.nslqdtl 342 
                  ++++kG++q++l++        ee++q++++a++id s+ kaw++w+l++++ +s+         p+d   ++++av+++l+++sl+ + ++ +++ 
  EPX72752.1 2895 FFTLKGMFQNSLGE-------YEEANQAFATAVQIDLSLGKAWAEWGLYHDNLFSAT--------PQDPW-HACNAVSCYLQAASLYPSsKAKKYLS 2975
                  **************.......9***********************************........76766.****************9999****** PP

                  HHHC CS
         FAT  343 RLLt 346 
                  RLL+
  EPX72752.1 2976 RLLW 2979
                  ***8 PP

>> PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.55     2e+03      63     132 ..    1638    1736 ..    1634    1748 .. 0.48
   2 !  113.4   0.5   4.1e-36   1.5e-32       2     249 ..    3318    3591 ..    3317    3592 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.55
                      EEEHHHHHHHHHHHC........TTSTCHHHHH...........HHHHCHCHCCHHHHHCC......HHHHHHTS..STTHHHHHHHHHSSSH CS
  PI3_PI4_kinase   63 setaaslldeklekk........gvpptasves...........lrvaldkkklkkekklk......fekrtalk..pksgllqeFvkkspsa 128 
                      +e + +++d++ +++         +++t ++ s           +++ +d+ ++k+ + l         + ++++    ++llq+F++++ + 
      EPX72752.1 1638 CEFLLKIYDHCIKEFdsgldllgAFQSTEYYLSntlmitltkhlQNSLSDNFEMKLRSLLFnflsvnS-SLQLKNtlLNDVLLQYFHQHKGDN 1729
                      56666666666665566444444222222222244333434444334444444444444446666532.222222114688999999998877 PP

                      H...HHH CS
  PI3_PI4_kinase  129 e...ewl 132 
                      e   +w+
      EPX72752.1 1730 EscqAWF 1736
                      5222554 PP

  == domain 2  score: 113.4 bits;  conditional E-value: 4.1e-36
                      EEEEEECSSCHHHHHHHHHHHHHHHHHHHHTTTTCCCT-------EEESSSSEEEEE--TTEEEHHHHHHHHHHHCTTSTCHHHHH....... CS
  PI3_PI4_kinase    2 sagiykvgddlrqdelivqvfklmdeelskennpkrrklalktysviplgrkcgiielvassetaaslldeklekkgvpptasves....... 87  
                      +a++y++++++r++e++ q+++ ++ +l+++ + +rr+++++ + +ipl+++++i+ + a   t++++ d+++e++g++++  +++       
      EPX72752.1 3318 FALQYPATRHSRREERMHQLLRSINSILERKIEVQRRNITFNVPISIPLSSHMRILSDDAANVTVQQINDRYCEEHGMASDHPIRFffdklqs 3410
                      689****************************************************99999999*************88888888878888999 PP

                      ........HHHHCHCHCCHHHHHCC............HHHHHHTSSTTHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHT-TT--TT CS
  PI3_PI4_kinase   88 ........lrvaldkkklkkekklk............fekrtalkpksgllqeFvkkspsaeewlearkqFvrslaklsvldyilgngDRhld 160 
                              ++++++ + l+++kk+              + + +l p+  ++ +F k ++++ +++ + + F+ ++a++ + +y++++g R ++
      EPX72752.1 3411 nliqlkhgNKMHFEDSSLEEKKKVYrrralalrmqilDTIKDSLIPETIYYGFFSKVYNNYSDFWFFKRAFTVQYAYFLMTTYMFNIGSRFPH 3503
                      99999999999999999999998889999999999999999999************************************************* PP

                      TEEEETTTSEEEESSTTTCCTCSHCSSSS-.SSSSSS-THHHHHHTSTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCCSSC CS
  PI3_PI4_kinase  161 NilvdktsgklihIDfGlilpdewkllpfpqekvPfrltrelvlaidpskdeglfresceealealrrdqnlltrllkkavkdglilwe 249 
                      +  +++ sg +   D    ++++++++++p e vPfrlt+ ++++i++++ egl+   + ++ +++ + +  +++ l+++++d++ +w 
      EPX72752.1 3504 KVNINRSSGSISSADLLPLMTSNQPTFNNP-EAVPFRLTPPIQYLIGDIGVEGLLVGVLISFAQSFLSSDADIRQHLSLYIRDEVLWWH 3591
                      ******************************.*******************************************************995 PP

>> FATC  FATC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.8   0.0    0.0034        12      17      32 .]      41      56 ..      40      56 .. 0.93
   2 !   31.6   1.3     3e-11   1.1e-07       2      32 .]    3630    3660 .]    3629    3660 .] 0.96

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0034
        FATC 17 dpeNLaqmyiGWcPww 32
                +++NL+ +++ W P++
  EPX72752.1 41 SVQNLGTIFSSWIPFL 56
                899************6 PP

  == domain 2  score: 31.6 bits;  conditional E-value: 3e-11
        FATC    2 LsveqQVdrLIkeATdpeNLaqmyiGWcPww 32  
                  L+++q+  +LI++AT+p+ Laqm+  W++w+
  EPX72752.1 3630 LPITQTLIDLISQATNPKQLAQMDQLWQAWL 3660
                  999***************************7 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1       1.1   4.1e+03      22      33 ..    2562    2573 ..    2561    2574 .. 0.88
   2 ?    8.1   0.0   0.00095       3.4       1      31 [.    2893    2923 ..    2893    2925 .. 0.91
   3 ?   -0.3   0.0      0.47   1.7e+03      19      33 ..    2953    2967 ..    2953    2968 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.1
                  HHHHHHHHHHHH CS
       TPR_8   22 eyyekaleldpd 33  
                  ++ye++ ++d++
  EPX72752.1 2562 ASYEQCYKWDKA 2573
                  68*******986 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.00095
                  CCHHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
       TPR_8    1 aeayynlgsiylklgdyeeAkeyyekaleld 31  
                  ae   ++g+   +lg+yeeA +++  a+++d
  EPX72752.1 2893 AEFFTLKGMFQNSLGEYEEANQAFATAVQID 2923
                  5677899*********************998 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.47
                  HHHHHHHHHHHHHHH CS
       TPR_8   19 eAkeyyekaleldpd 33  
                  +A+++y +a +l p+
  EPX72752.1 2953 NAVSCYLQAASLYPS 2967
                  69**********996 PP

>> RasGEF_N_2  Rapamycin-insensitive companion of mTOR RasGEF_N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.0    0.0027       9.7       7      44 ..    1357    1395 ..    1356    1449 .. 0.71
   2 ?   -0.1   0.2      0.35   1.2e+03      43      73 ..    1679    1710 ..    1638    1745 .. 0.68
   3 ?   -1.8   0.0       1.2   4.2e+03      16      76 ..    2188    2254 ..    2183    2262 .. 0.51
   4 ?   -1.2   0.0      0.73   2.6e+03      62      91 ..    3567    3595 ..    3538    3597 .. 0.74

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0027
  RasGEF_N_2    7 iellvnqLydqsrevvaaaleiLeeacddk.eslevlve 44  
                  i++ +++Ly +s+ev++aa   L++a++d+ +  ++l++
  EPX72752.1 1357 ISVFFKSLYVKSNEVIEAAFTGLQHALKDDqKLPKELLQ 1395
                  78899*********************9999455555555 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.35
  RasGEF_N_2   43 velkpslqhl.geigslLllkllstssGfkyl 73  
                   +l++sl++  + + + Ll+++ls+ s +++ 
  EPX72752.1 1679 KHLQNSLSDNfEMKLRSLLFNFLSVNSSLQLK 1710
                  34555554443558899*********999854 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 1.2
  RasGEF_N_2   16 dqsrevvaaaleiLeeacddkeslev.......lvelkpslqhlgeigslLllkllstssGfkylqel 76  
                  dq r   +a ++i+e+ ++++ +          ++++++s+  l+e ++ Lllk+ s+++ f+ ++++
  EPX72752.1 2188 DQRRWFLSALVQIVEKSTNEQICSSIfravcswVTNFENSVPTLKE-KAALLLKMVSFENRFTSVNNS 2254
                  5555555555555555555543222200000002333344456644.677778888888777777665 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 0.73
  RasGEF_N_2   62 kllstssGfkylqeln.fveeeldkWiekkn 91  
                   +ls++  ++  q+l+ ++++e+ +W ++++
  EPX72752.1 3567 SFLSSDADIR--QHLSlYIRDEVLWWHKQQK 3595
                  4566666655..55677*********99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (3660 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       672  (0.0374812); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.47u 0.31s 00:00:01.78 Elapsed: 00:00:00.54
# Mc/sec: 20543.85
//
Query:       EPX72753.1  [L=928]
Description: hypothetical protein SOCG_00515 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.5e-131  439.3   4.6     2e-130  435.6   1.5    2.8  2  TrkH      Cation transport protein


Domain annotation for each model (and alignments):
>> TrkH  Cation transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    2.4   0.1    0.0023        41      57     216 ..      47      83 ..      11     119 .. 0.57
   2 !  435.6   1.5  1.1e-134    2e-130     108     501 ..     514     914 ..     476     915 .. 0.94

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.0023
        TrkH  57 esaslafldalfeavsgltttglsvivveeslprsgltlraqlqqiGglgvvvlaylslptlgrgsaflylseaqkeelggkelrslselikilvvyyv 155
                 +s                                                                                                 
  EPX72753.1  47 ASG------------------------------------------------------------------------------------------------ 49 
                 444................................................................................................ PP

        TrkH 156 gleilafvllvvliytakaysevvdstgvsplwwaffhsmSafnnlGfsltp.nSlasfnkn 216
                                             ++p  +a+f +  a+++ G+ +   + +  +++ 
  EPX72753.1  50 ----------------------------RLPYIDALFLASGAVTQSGIPTVNiSDISVYQQL 83 
                 ............................4455555555555555555544443334444442 PP

  == domain 2  score: 435.6 bits;  conditional E-value: 1.1e-134
        TrkH 108 vvlaylsl.ptlgrgsaflylseaqkeelggkelrslselikilvvyyvgleilafvllvvliytakaysevvdstgvsplwwaffhsmSafnnlGfsl 205
                   l++ls+ pt+gr+saf++ls +++eel+ +e++sl++l+ +l++y+++++il++v ++++iytak ++++ +s g++++wwa+f+s+S fnn Gf l
  EPX72753.1 514 ATLPFLSYqPTIGRNSAFYALSAEEREELARIEYQSLKLLLFLLTIYFILWHILGLVGFLIFIYTAKVSGRACTSAGINRGWWAAFTSASLFNNIGFAL 612
                 579************************************************************************************************ PP

        TrkH 206 tpnSlasfnknivillvaiifiilGnigFpillrviiaikkkilrdl.kqikeslsflldlprrcftLllasgfvwllllelavlnvtdnilfilldeg 303
                 +++Sl+ f+k+i+++++ +i+i+ Gn++Fpi lr++i+     ++++ +++++sl fll++prr+ftLl++s+++w l  +l++ln +++++f++l++ 
  EPX72753.1 613 HDDSLNQFQKAIFPQVMGTILILTGNTFFPIALRLMIWCSLWFSKFYtPHFQQSLIFLLEHPRRSFTLLFPSKTTWYLTANLLGLNLLSFFFFMVLNLS 711
                 ****************************************999998779************************************************** PP

        TrkH 304 slvvksipkgsrvlkalFqsvstrtaGFsvvdlsnlhpaikvllvlmmyigglpgStaggIrrtnvyeefslgkyeieqekepkav............. 389
                 +++vk+ip+g+r+++++Fq++str aGF+v+d++n++pa++               +a++Ir+tnvyee+slg+y+   ++  + +             
  EPX72753.1 712 NHYVKQIPVGYRIMNGIFQNASTRAAGFTVIDIGNIAPAVI---------------IAMSIRQTNVYEERSLGIYAPPIDDTSDDEsdgsgketkqkqs 795
                 **************************************985...............689****************655555544445789********* PP

        TrkH 390 ......skksidgkhlerqllvdlwslflvlliilileglklsdvqepdfsffdiLfevvSaygtvGLSlG.aknaslsaqlttisklvlialmirGrl 481
                       s ++++ +h++rql++dlw++f+++++i+ileg +l+   ep+f++f i+fevvS+ygtvGLSlG ++  slsaq+++iskl++ial+irGr+
  EPX72753.1 796 kpakpkSGRNFLADHIQRQLSHDLWYMFFGFFLITILEGPRLERADEPQFTLFSIFFEVVSGYGTVGLSLGyNSSPSLSAQFRKISKLIMIALEIRGRH 894
                 *****99****************************************************************66************************** PP

        TrkH 482 rglpvlldraillpsdklee 501
                 rglp++ldra+l+psdk+++
  EPX72753.1 895 RGLPSVLDRAVLMPSDKNFD 914
                 *****************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (928 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       676  (0.0377043); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.71u 0.30s 00:00:01.01 Elapsed: 00:00:00.47
# Mc/sec: 5909.11
//
Query:       EPX72754.1  [L=267]
Description: GNS1/SUR4 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-51  175.6  20.3    1.5e-51  175.3  20.3    1.0  1  ELO       GNS1/SUR4 family


Domain annotation for each model (and alignments):
>> ELO  GNS1/SUR4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.3  20.3   8.4e-56   1.5e-51      27     249 ..       1     218 [.       1     220 [. 0.90

  Alignments for each domain:
  == domain 1  score: 175.3 bits;  conditional E-value: 8.4e-56
         ELO  27 mknrkpfklkalvilhnlflavlSavgfvgmvkallevlkkkglvdllckddssdegrlrngllaflvllfylsKfvEllDTvflvlrkkqvsfLhvYH 125
                 mk r p++lk++++ +nl+ +v S ++++ +++++  ++ k+g++ ++c     + ++ ++++l fl++  y+sKf+El DT+flvlrkk+++fLh YH
  EPX72754.1   1 MKYRSPIRLKKTFQYYNLVFSVSSGILALLIFEQVAPMIYKHGFFFSIC-----N-EKAWSQPLLFLYYCAYISKFLELADTLFLVLRKKPLQFLHYYH 93 
                 67899**********************************99********.....4.5566666666666666*************************** PP

         ELO 126 HatvmllmwaglrfatssgivfivllNsfvHaimYtYYflsalgakklvvpwkrliTslQilQfvvgllaavyllvsytlkk........vgCdtsqtp 216
                 H ++++l++ ++    +s  ++i+ +N++vH++mY+YY+l+a g++   vpwk+++T++Qi+Qf++ l ++++++ ++ l +        ++C+ +   
  EPX72754.1  94 HGATAFLVYSQIVGR-TSISWLIIEINLLVHVVMYYYYYLVARGIR---VPWKKWVTRFQIIQFFADLGFIYFVFGTELLYRsknykycmGHCSGD--- 185
                 ***************.66666666*****************66665...8******************9999999987777788998887777555... PP

         ELO 217 kaairlnllyllslllLFlnffiksylkkkkkk 249
                  +a+ ++l+ + s+l+LF+ f++++y k+  +k
  EPX72754.1 186 PFAALCGLVTISSYLVLFVVFYRNTYKKNAASK 218
                 79************************9988766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (267 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1027  (0.0572815); expected 358.6 (0.02)
Passed bias filter:                      528  (0.0294495); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 1772.92
//
Query:       EPX72755.1  [L=151]
Description: nucleoside diphosphate kinase Ndk1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-55  185.4   0.0    4.9e-55  185.2   0.0    1.0  1  NDK       Nucleoside diphosphate kinase


Domain annotation for each model (and alignments):
>> NDK  Nucleoside diphosphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  185.2   0.0   2.7e-59   4.9e-55       1     135 []       4     138 ..       4     138 .. 0.99

  Alignments for each domain:
  == domain 1  score: 185.2 bits;  conditional E-value: 2.7e-59
                 EEEEEEE-HHHHHTT-HHHHHHHHHHHT-EEEEEEEECE-HHHHHHHTGGGTTSTTHHHHHHHHTSSEEEEEEEESTTHHHHHHHHH--SSTTTSSTTS CS
         NDK   1 ertlvliKPdavkrgligeiisrleekglkivalkmlrlteeqaeehYaehkgkpffeelvefmtsgpvvalvlegedaiekvreliGatnpaeaapgt 99 
                 e+t++ iKPdav+rglig ii+r+e++g+k+ a+k+l  ++ ++e+hY+ehkgkpffe+lv fm sgpv+a+v+eg+d++++ r+++Gatnp  +apgt
  EPX72755.1   4 EQTFIAIKPDAVQRGLIGPIITRFERRGYKLRAIKLLVPDRTLLEKHYEEHKGKPFFEKLVGFMGSGPVCAMVWEGKDVVKTGRAMLGATNPLASAPGT 102
                 89************************************************************************************************* PP

                 HHHHH-SSSTT-SEEE-SSHHHHHHHHHHHSTGGGS CS
         NDK 100 iRadfgvslgeNlvHgSdseesaereiklfFkeeei 135
                 iR+d+g++lg+N++HgSds +sa++ei+l+F++ ei
  EPX72755.1 103 IRGDYGIDLGRNVCHGSDSVDSAKHEISLWFQPAEI 138
                 ********************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       254  (0.014167); expected 358.6 (0.02)
Passed bias filter:                      253  (0.0141112); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.42
# Mc/sec: 1090.63
//
Query:       EPX72756.1  [L=685]
Description: gamma tubulin complex subunit Mod21 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      2e-34  119.0   9.2      5e-33  114.4   9.2    2.1  1  GCP5-Mod21      gamma-Tubulin ring complex non-core subunit m
    0.00022   20.9   1.1    0.00037   20.2   1.1    1.3  1  GCP_N_terminal  Gamma tubulin complex component N-terminal
  ------ inclusion threshold ------
      0.035   14.0   0.2       0.12   12.4   0.2    1.8  1  GerD            Spore germination GerD central core domain


Domain annotation for each model (and alignments):
>> GCP5-Mod21  gamma-Tubulin ring complex non-core subunit mod21
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.4   9.2   8.4e-37     5e-33       4     653 .]      52     683 ..      49     683 .. 0.76

  Alignments for each domain:
  == domain 1  score: 114.4 bits;  conditional E-value: 8.4e-37
  GCP5-Mod21   4 qvesvvdkfriqgredlandlddrleeldrvessvknsllhaeiLhllLelSksPsdv..avpkepaekdlnkeleeEaliseddenleesdeGdhWdl 100
                 ++  v +k++i+gredl+ +l +++++l+r + s k++ l+ + L +lLelS++P ++   +p ++  +dl +e  e +l +   e l  s  GdhW+ 
  EPX72756.1  52 RLYRVSEKMSILGREDLEVPLVNACKNLERNTISLKEEFLYSQFLTVLLELSRNPLEIpnSEPTNEG-EDLHAE-TESRLLN---EEL-SSLGGDHWEE 144
                 556799***************************************************9445678887.999999.4455556...445.5789****** PP

  GCP5-Mod21 101 peWsssd......ddesvtkseEeeevtdeneeinepsnfPhipvieksenfekqdlidlfekeaqkildklleKk.....dsslnevlriseqsilre 188
                 p+W +        dd ++     + +  de ++i++   + + p      n +  +   +  + ++ i+ +   K+      ss  e   ise+ ++++
  EPX72756.1 145 PDWMEITseeeelDDSTIGDTHCSTPARDEGQKIDN--TYADDPY---ARNLQSLNHPSIPYDRKEAIASFRRVKPfmffdGSSDLEGKNISERWFMKD 238
                 ***874311112245566666666666666655543..3445666...6777778888888899****************877888999********** PP

  GCP5-Mod21 189 tiymLiGyqsfif.....skveevldlvPkldtlseeieesillelkdfGkel....evlnqvasekqcrflksdssdeekqepFvsevtivqqitpnl 278
                 +iymL G +s +f       +e + + +Pk++ l ++   s+l  ++ +G+ l    ++l+  a+ +  ++ + ++s++ ++e        ++ ++  l
  EPX72756.1 239 VIYMLHGLPSSFFqicddGTIEVRHQILPKVNSLTQKSVYSVLDVFASHGSCLtnyrNLLKDLAEANVGHVNLHQPSEIVRKEII------LPYLKEPL 331
                 *************9999999*******************************9933333555666666677777888888888865......56666666 PP

  GCP5-Mod21 279 letikn...eLlkleteVrkvrynilk...LeqsvrhvkkFvelfrk..afldsatqvmdllkslvfifirRrqnSllfsaalkklYkesliaelllev 369
                 + ++ +   +L  le e+    y +     L+q   ++   +  +++    ++++t v+d+++ l  +  ++     + ++a++ l+k s +a   +  
  EPX72756.1 332 ETCLAElqkRLHGLEYEI----YCVSTkstLFQAYMDLSPIIFCLKNylEIINASTTVWDVMEKLDVLKQQK-----HETDAYNYLFKSSCVAVFRWLY 421
                 665543333999999999....44332355999999998776677651145799********9998765444.....44577889******99999988 PP

  GCP5-Mod21 370 isvskitasydisspllsilk.esfrvirkraesllkeysekflekkciasqrgsflkvVltfslaltnlekesEilidskvarsdnyqlkagefsLeL 467
                   +++     ++++ + +i+   +++   k +e  lk     f+ ++++     sf  v ++ +  ++  + +      ++ + ++n +l  ++   +L
  EPX72756.1 422 QFANRLHV-EKVPRYMKQIISlMKQPDFEKDYENFLKHIESSFIYENAL-----SFAEVLVQLEICFQTKKLNISFWGIENKSSQKNAPLLGLS---SL 511
                 88888765.5789888888842478888888888888888788777654.....5555666666666554444443333333467778887777...77 PP

  GCP5-Mod21 468 syelqsfsdrFeslekafeEakkeLseKkfskfvyghlvflktvrdfllrlkkkftkeevsiFGvfeddnkelddekvrhekek.......lvlkkktk 559
                  ++l+s       l k+ +  +         k  ygh+v ++t+ ++++ l++++    v           ++++++    ke         +    ++
  EPX72756.1 512 IHNLESAKCSL--LLKQKKPQW---------KVAYGHYVLIQTCLNYIISLHNEMQTLLVDAI--------NVNTNSSFFKKEImpvrdniDIDGTVEQ 591
                 88888776666..555544444.........789*****************999876544444........4455554444444444444566667788 PP

  GCP5-Mod21 560 elkeflvkrvakLlneelsnvhkeeLkdvldntyktsvaeaid.ndrlvtldedcnidfilakladvlihpsqpiadkavrfrsaLaeeiieimp 653
                  l+++++++v+++l  e s+++k+  + v++  + t+  +  + n+    +de cn   i+ kl+  l hp +p+   a+ +r+  +e++++i p
  EPX72756.1 592 FLQDVFTEDVLEILQIEESTCKKDVFASVMERRFSTKSGSVFQsNEVGQETDELCN---IFVKLSRLLLHPDRPVDPAAYCCRRRFSELLLLIIP 683
                 9******************************88888777655414444578999**...99*****************************98865 PP

>> GCP_N_terminal  Gamma tubulin complex component N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   1.1   6.1e-08   0.00037       1     192 [.     236     455 ..     236     476 .. 0.79

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 6.1e-08
  GCP_N_terminal   1 lrdllylLqGisgklirfdekdd..ervvkdvrlpgllppslrslverllelgtlyrrlrkfveev..............srsesglvlqalaaa 79 
                     ++d++y+L+G++++++++ ++ +   r++  +++++l+ +s+ s+++ +++ g+++ + r+ +++               +  +   +l  l++ 
      EPX72756.1 236 MKDVIYMLHGLPSSFFQICDDGTieVRHQILPKVNSLTQKSVYSVLDVFASHGSCLTNYRNLLKDLaeanvghvnlhqpsEIVRKEIILPYLKEP 330
                     58**************9766555455555666667778888888888888888888888888877655567777777777666667777777777 PP

  GCP_N_terminal  80 ldeelteyyrliaqlEsqlledsesi......ltLlrlevwlqetllllrvLanlveeve.....kanlkggallsllhe.aaqhgdpkvrklls 162
                     l++ l+e ++ +  lE ++ + s++       + L+ + + l+++l+++ +  ++ + +e     k+++++    ++l++ ++     ++ ++++
      EPX72756.1 331 LETCLAELQKRLHGLEYEIYCVSTKStlfqayMDLSPIIFCLKNYLEIINASTTVWDVMEkldvlKQQKHETDAYNYLFKsSCVAVFRWLYQFAN 425
                     7777777777777777777777766589999999999999999999999998888887778888889999**********66668888******* PP

  GCP_N_terminal 163 ellervsrpflemlekWileGelsDpynEf 192
                     +l  + +  +++++ + + + +++ +y+ f
      EPX72756.1 426 RLHVEKVPRYMKQIISLMKQPDFEKDYENF 455
                     **************9999999998776555 PP

>> GerD  Spore germination GerD central core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.2   1.9e-05      0.12      57      82 ..     433     458 ..     428     467 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.9e-05
        GerD  57 peYqkmlleilkdpemekqllellks 82 
                 p Y k++++++k+p++ek +++ lk 
  EPX72756.1 433 PRYMKQIISLMKQPDFEKDYENFLKH 458
                 99*******************99985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (685 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       541  (0.0301746); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.30s 00:00:00.92 Elapsed: 00:00:00.47
# Mc/sec: 4366.45
//
Query:       EPX72757.1  [L=601]
Description: STE/STE20/PAKA protein kinase Shk2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.7e-70  236.8   0.4    4.6e-70  236.0   0.4    1.4  1  Pkinase         Protein kinase domain
    2.2e-56  191.0   0.2    3.4e-56  190.4   0.2    1.3  1  Pkinase_Tyr     Protein tyrosine kinase
    6.9e-15   55.5   4.9    2.4e-13   50.5   2.9    2.9  2  PH              PH domain
    1.4e-10   41.4   0.6      1e-09   38.6   0.1    2.5  2  PBD             P21-Rho-binding domain
    1.1e-07   31.5   0.0    1.9e-07   30.7   0.0    1.4  1  Kinase-like     Kinase-like
    1.9e-05   23.6   2.9    4.3e-05   22.5   2.8    1.6  1  Pkinase_fungal  Fungal protein kinase
    0.00025   20.5   1.3    0.00046   19.6   1.3    1.4  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
     0.0046   16.8   0.2      0.014   15.2   0.2    1.8  1  GRAM            GRAM domain
  ------ inclusion threshold ------
       0.01   15.8   0.1      0.044   13.7   0.1    1.7  2  APH             Phosphotransferase enzyme family
      0.012   15.5   0.1      0.036   14.0   0.1    1.8  1  KIND            Kinase non-catalytic C-lobe domain
        0.1   12.7   1.3       0.34   11.0   1.3    1.9  1  BCL_N           BCL7, N-terminal conserver region


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  236.0   0.4   2.8e-73   4.6e-70       2     264 .]     322     578 ..     321     578 .. 0.89

  Alignments for each domain:
  == domain 1  score: 236.0 bits;  conditional E-value: 2.8e-73
                 EEEEEEEEESSEEEEEEEETTTTE.....EEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEE.ESSEEEEEEE--TTEBHHHHHHHHSS CS
     Pkinase   2 ekleklGeGsfGkVykaveketgk.....ivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfe.ekdelylvleyveggeladllerkgs 94 
                 ++++klG+G++G+Vy a+ k++++      vA+K i+ ++++ k+   +l+Ei++++++ hpniv ++++f  ++++l++v+ey++ g+l+d+++ + +
  EPX72757.1 322 SVKHKLGQGASGSVYLAKVKADHQfykngLVAIKSIDFHSQSRKEL--LLNEITVMRESFHPNIVSFLDAFLiKERHLWVVMEYMDAGSLTDIIQ-RHK 417
                 6789*************98887652222268********9998776..*********************98626899*****************8.588 PP

                 --HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEE.SSSSCSBCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHH CS
     Pkinase  95 lseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlake.lessskltsfvgtseYlAPEvlkeneyskkvDvWslGvilyellt 192
                 l+ee++ +i+ ++++g+++lH++++iHrD+K++N+Li+++g++KitDFG++++ +++s+k  ++vgt++++APE++k+++y++kvD+WslG++++e+l 
  EPX72757.1 418 LNEEQVARICLETCKGIQHLHARNVIHRDIKSDNVLINKEGQIKITDFGFCARlMDRSHKRVTMVGTPYWMAPEIIKQQKYGTKVDIWSLGIMIIEMLE 516
                 9************************************************9765156666699************************************* PP

                 SS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 193 gkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 ++pp+ ge+  +          ++++i ++ + +l++++ +s+e++++l+++l+ d   R ta+ell+h++l
  EPX72757.1 517 NEPPYLGEDPMK----------ALYMIAKTGTPSLKKPELVSKELLSFLNSCLNTDTVFRATAAELLNHSFL 578
                 ******444433..........344555567899***********************************996 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  190.4   0.2   2.1e-59   3.4e-56       3     257 ..     323     574 ..     321     576 .. 0.92

  Alignments for each domain:
  == domain 1  score: 190.4 bits;  conditional E-value: 2.1e-59
                  EEEEEEEESSEEEEEEEEET.TTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEE.SSSSEEEEEE--TTEBHHHHHHHTCTT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkg.ekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvct.keepllivteyvkgGdLlkfLrkkeke 98 
                  +++klG+Ga G+V+ +++k  ++  k+  Va+K+++ +++ ++ke ll+e+++m++  hpniv++l + + ke++l++v+ey++ G+L + ++++   
   EPX72757.1 323 VKHKLGQGASGSVYLAKVKAdHQFYKNGLVAIKSIDFHSQ-SRKELLLNEITVMRESFHPNIVSFLDAFLiKERHLWVVMEYMDAGSLTDIIQRH--- 416
                  689****************9777789999******65555.55999********************999989999*******************9... PP

                  TSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHHH CS
  Pkinase_Tyr  99 kltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfGvllw 196
                  kl+ +++ +++l+ +kG+++L++++++Hrd+ + NvL++++ ++ki+DfG + ++  +d+ +k+ +      WmapE++k++k+ +k D+Ws G++++
   EPX72757.1 417 KLNEEQVARICLETCKGIQHLHARNVIHRDIKSDNVLINKEGQIKITDFGFCARL--MDRSHKRVTMVGTPYWMAPEIIKQQKYGTKVDIWSLGIMII 512
                  ******************************************************9..666677777888899************************** PP

                  HHHTTSSGTTTTSHHHHHHHHH.HTTEE.S-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 197 Eiftlgespypglkneevlekl.kegkr.lekpekcpeelyelmkkcweedpeeRptfselve 257
                  E+++  e py g +++++l ++ k+g+  l+kpe +++el +++++c+++d   R+t +el++
   EPX72757.1 513 EMLE-NEPPYLGEDPMKALYMIaKTGTPsLKKPELVSKELLSFLNSCLNTDTVFRATAAELLN 574
                  ***9.9*******99999999965555459**************************9999875 PP

>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.5   2.9   1.5e-16   2.4e-13       1     102 [.      25     121 ..      25     123 .. 0.88
   2 ?    3.5   0.0     0.062     1e+02      17      58 ..     150     187 ..     133     208 .. 0.82

  Alignments for each domain:
  == domain 1  score: 50.5 bits;  conditional E-value: 1.5e-16
                 EEEEEE.EEEETSSSSCSEEEEEEEEETTEEEEESSTTCTTESSEEEEEESTTEEEEEEECTTSSSSTSEEEEEESTSSS.TEEEEEEESSHHHHHHHH CS
          PH   1 vvkeGw.LlkkgsgkkkswkkrwfvLkdsellyykndksekdkepkgsislsncevvevvatedpkrkfcfelriverng.srtyllqasseeerkeWi 97 
                 vv+eGw +lk +++k   w k+w++L+ +++++yk+    k+ + + +i l+++e ve+    ++ r fcf+l+++  ++ s+ + +++s+++++ eW+
  EPX72757.1  25 VVREGWvMLKEEKTKYLPWTKKWLTLSHNSISIYKSN---KSDSAQLTILLKDIEKVER----SKSRTFCFRLKLKIYQStSQALEISVSNNMDCYEWM 116
                 78****76666655555********************...*****************76....9*********666666656***************** PP

                 HHHHH CS
          PH  98 kaiqs 102
                  +i++
  EPX72757.1 117 DSISA 121
                 **986 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.062
                 SEEEEEEEEETTEEEEESSTTCTTESSEEEEEESTTEEEEEE CS
          PH  17 swkkrwfvLkdsellyykndksekdkepkgsislsncevvev 58 
                 +  k w +L ++  +y k+      ++pk +i  sn++++e 
  EPX72757.1 150 GLPKEWSILLNNGSVYAKDI----LEKPKSTIQASNHSSEEF 187
                 67899*****9999999999....***********9998875 PP

>> PBD  P21-Rho-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.6   0.1   6.4e-13     1e-09       1      54 [.     127     179 ..     127     182 .. 0.93
   2 ?   -0.3   0.1      0.87   1.4e+03      28      44 ..     302     318 ..     290     324 .. 0.81

  Alignments for each domain:
  == domain 1  score: 38.6 bits;  conditional E-value: 6.4e-13
                 -B---EEEEEEEEEEEETTTTEEES--CCHCCCHHHT.TTSXXXBEXXXXXXXX CS
         PBD   1 eIStPtnfkHtvHVGwdgdsgnftglPpewkkllkssgItedelkenpkavlsv 54 
                 ++S P+++kH++HVG+d+ +g+++glP+ew  ll++ ++  ++  e pk+++++
  EPX72757.1 127 KVSGPMDPKHEIHVGIDS-NGKYVGLPKEWSILLNNGSVYAKDILEKPKSTIQA 179
                 59****************.8999*************999999999999999875 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.87
                 CCHCCCHHHT.TTSXXX CS
         PBD  28 pewkkllkssgItedel 44 
                 ++ +++lkss I++d +
  EPX72757.1 302 KQVMEILKSSIISKDPS 318
                 678999****9999976 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.7   0.0   1.2e-10   1.9e-07     132     244 ..     411     515 ..     372     556 .. 0.77

  Alignments for each domain:
  == domain 1  score: 30.7 bits;  conditional E-value: 1.2e-10
  Kinase-like 132 qkrsethkkletiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvv..lsevekgf.aPpEllgsrggytrknktk 226
                  ++ +  + ++e++ar  l  +  + +++L+a+ ++h ++++dn+l +++g++++++f+   r  ++    + +v   +   pE++ +          k
   EPX72757.1 411 DIIQRHKLNEEQVARICL--ETCKGIQHLHARNVIHRDIKSDNVLINKEGQIKITDFGFCARLMDRSHkrVTMVGTPYwMAPEIIKQ---------QK 497
                  333444668899999888..779**********************************988776666540035555433256677665.........57 PP

  Kinase-like 227 mthkldaWqlGlviyriw 244
                  +  k+d W lG+ i  + 
   EPX72757.1 498 YGTKVDIWSLGIMIIEML 515
                  888***********9886 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   2.8   2.6e-08   4.3e-05     306     390 ..     421     497 ..     223     507 .. 0.64

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 2.6e-08
  Pkinase_fungal 306 kellealrDaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlkgee 390
                     +++ + + +  kg + L+   +++HrDi  +N+li+     +e +  + D+ +   l d s+++   + +GT+++ma e++k+++
      EPX72757.1 421 EQVARICLETCKGIQHLH-ARNVIHRDIKSDNVLIN-----KEGQIKITDFGFCARLMDRSHKR--VTMVGTPYWMAPEIIKQQK 497
                     44555667888999****.*****************.....678899***********754444..58************99766 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   1.3   2.8e-07   0.00046      94     171 ..     399     470 ..     389     480 .. 0.82

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 2.8e-07
         Kdo  94 llterlegaqdLedllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDldkarl 171
                 +++e ++ a +L+d++++ ++l+ee  +++  ++ + i+ lh+++v H+d+   n+l+++e+    +i + D+  +++
  EPX72757.1 399 VVMEYMD-AGSLTDIIQR-HKLNEEQVARICLETCKGIQHLHARNVIHRDIKSDNVLINKEG----QIKITDFGFCAR 470
                 6777775.789******8.77777777888888999*************************9....788888876665 PP

>> GRAM  GRAM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.2   8.7e-06     0.014      35      90 ..      48     102 ..      47     115 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 8.7e-06
                 EEEESSEE.EEEE-STT---EEEEEGGGEEEEEE....-TT-TT-EEEEESS-..EE CS
        GRAM  35 lyltnyrl.cFrskplgsskkvvlpladikriekstsaanllengiqvetsskdlel 90 
                 l+l+ + + +++s++  +s+++++ l+di+++e+s+s++  +  ++++++s+ +  l
  EPX72757.1  48 LTLSHNSIsIYKSNK-SDSAQLTILLKDIEKVERSKSRTFCFRLKLKIYQSTSQA-L 102
                 567777773566666.55667****************************999984.3 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0      0.16   2.6e+02      68     106 ..     395     438 ..     388     442 .. 0.78
   2 ?   13.7   0.1   2.7e-05     0.044     150     196 ..     421     468 ..     412     475 .. 0.79

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.16
                 TEEEEEEE----EE-SS.....HHHHHHHHHHHHHHHHHHCCHH CS
         APH  68 gllfalieyvpgrsllr.....klsaaqlpellealgeflaalh 106
                 ++l++++ey+++ sl++     kl+++q  +++ +    + +lh
  EPX72757.1 395 RHLWVVMEYMDAGSLTDiiqrhKLNEEQVARICLETCKGIQHLH 438
                 568**************988888888887777766665555555 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 2.7e-05
                 HHHHHHHHHH--S...SS-EEEE-SS-SGGGEEEC..TTEEEEE---TT- CS
         APH 150 eqvlaalaallpg...elptvllHgDlhpgNllvdpddgrvtGviDfeda 196
                 eqv++ ++++  g     ++ ++H+D++++N+l++  +g++  + Df+++
  EPX72757.1 421 EQVARICLETCKGiqhLHARNVIHRDIKSDNVLIN-KEGQI-KITDFGFC 468
                 456677777777777677999**************.66776.68999876 PP

>> KIND  Kinase non-catalytic C-lobe domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.1   2.2e-05     0.036       3      61 ..     409     464 ..     408     516 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 2.2e-05
                 HHHHHHHHTS---HHHHHHHHHHHHHHHHHHHTTT-..----STTSEEEETTS-EEE-- CS
        KIND   3 LeeiLklyeqpineEqAWAvCyqcakslaekerrrkkarriegaesvllkkDGtvklek 61 
                 L +i++     +neEq   +C  ++k++++ + r+  +r i+ +++vl++k+G++k++ 
  EPX72757.1 409 LTDIIQR--HKLNEEQVARICLETCKGIQHLHARNVIHRDIK-SDNVLINKEGQIKITD 464
                 5566554..469*******************99966666666.678*********9865 PP

>> BCL_N  BCL7, N-terminal conserver region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   1.3   0.00021      0.34      25      45 ..      39      59 ..      26      60 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00021
       BCL_N 25 kVrkWEKkWVtvkdtslkiyK 45
                k   W KkW t++ +s+ iyK
  EPX72757.1 39 KYLPWTKKWLTLSHNSISIYK 59
                4557****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (601 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       823  (0.0459033); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 4230.90
//
Query:       EPX72758.1  [L=485]
Description: calcium channel regulatory subunit Yam8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.3e-100  337.6  15.6   1.6e-100  337.3  15.6    1.0  1  Mid1      Stretch-activated Ca2+-permeable channel component
    0.00071   20.2   5.3      0.037   14.6   1.9    2.7  2  Fz        Fz domain


Domain annotation for each model (and alignments):
>> Mid1  Stretch-activated Ca2+-permeable channel component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  337.3  15.6  1.8e-104  1.6e-100      20     424 ..      70     456 ..      57     458 .. 0.87

  Alignments for each domain:
  == domain 1  score: 337.3 bits;  conditional E-value: 1.8e-104
        Mid1  20 keeepqLtlyvstsssnkkpgpekeeseqtveefeeGyvnatvnasedlYiavsapnstsk.............asgswnyelavStddlvhqyddrsn 105
                  e +++L ly s+ s  ++ + ++     ++++++ G ++++v+  + ++iavs  +s+ +                + +yel++ ++ ++ qy+ +++
  EPX72758.1  70 FEGSSNLFLYASNYSFDNSLALGNY----SYSSVDLGLASLSVTGYSPMFIAVSSSDSQYSqsyigsnqdktsnSAYQTQYELSAGNNFTFTQYNATKF 164
                 4667788888888766555444332....236679999999999999999999666665555666666665431333789******************* PP

        Mid1 106 lllvDsdsnsALlvtgnlteseadaeskkelvkkeapYelfasseed..ssklkglerSlcalkngaqlassknnseevklslttrglgnkvkqqfyvk 202
                 l+  D+d ++ALl+tgnlt++  d+++        + Y+++++++++  ++++ +l+rS+ca + +++  + +    +++ls+t rglg   k+qfy+k
  EPX72758.1 165 LFAQDTDFQAALLITGNLTTN--DTSV-------IPNYQIYVNPTDStfNKQIGQLSRSFCAYRGNPSTLNIN----NADLSMTVRGLGPFAKEQFYLK 250
                 *******************42..2322.......256******988522467999************955544....4678****************** PP

        Mid1 203 gLnasttYlailvkkgskknstasgggkvfkavefetkaddnCqliydLdFCdevaYavPsnsklfknktelaklYddyakslyanFskslqqiaCeae 301
                 gL+++t+Y+a++vk++ ++     +gg+ + +++f+tk  ++CqliydL+FC+evaY+vP n+ ++ ++++la+ Y+++a  +y+nF+++l+q +C+a+
  EPX72758.1 251 GLSPNTSYTAYIVKPNIDA-----SGGMTYPPITFTTKVGTTCQLIYDLEFCSEVAYSVPGNAAAY-SASSLASWYNQQAFGYYQNFTYTLDQYPCNAT 343
                 **************99444.....8***************************************98.******************************** PP

        Mid1 302 sdarYSllrtCddCaeaYknWLCaVtiPRCedfsseakylqernvgqaflngaaknssRnslidevikPgpYkevlPCedlCyklvrsCpaslgFsCPk 400
                 + + YSllr+C+dC ++YknWLCa  iPRC+d + ++++l++rn +           sR +lidev++PgpYkevlPC  lCy+l  sCp ++gFsCP+
  EPX72758.1 344 ALSIYSLLRNCSDCLQSYKNWLCAAVIPRCADITDNSTFLVYRNNN-----------SRYPLIDEVVRPGPYKEVLPCAHLCYSLASSCPVDMGFSCPS 431
                 ********************************************99...........9***************************************** PP

        Mid1 401 kksllelsYglrsed.geitCnylG 424
                 ++ +le+sYg+ s+  g i Cn +G
  EPX72758.1 432 PGFGLEESYGYISNAtGVIACNAPG 456
                 ***********9988677****999 PP

>> Fz  Fz domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   1.9   4.1e-06     0.037       1      66 [.     288     377 ..     288     388 .. 0.57
   2 !    5.8   0.1    0.0023        20      70      90 ..     405     425 ..     395     437 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 4.1e-06
                 -EE-.E...ETT-S.........-SEE-............GGGS.S-SSHHHHHHH...............HHHHHGGGG-.HHHTTSTTHHHHHHS-- CS
          Fz   1 Cepi.elelCkaig.........ynsts............lpnllgheteeevaee...............leefsllvkl.eCspalklflCsllfpk 61 
                 C+ i +le+C+++          y+ +s            +              +               l+ +sll +  +C + +k +lC++++p+
  EPX72758.1 288 CQLIyDLEFCSEVAysvpgnaaaYSASSlaswynqqafgyY--------------QnftytldqypcnataLSIYSLLRNCsDCLQSYKNWLCAAVIPR 372
                 67677888888887233333333222223333322223322..............0344443444433333666677777799**************** PP

                 -EESS CS
          Fz  62 Cepsg 66 
                 C + +
  EPX72758.1 373 CADIT 377
                 *6443 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0023
                 EEE---HHHHHHHHTT-GGGS CS
          Fz  70 aplppCrslCeavrdsCekvl 90 
                 + ++pC +lC++  +sC  ++
  EPX72758.1 405 KEVLPCAHLCYSLASSCPVDM 425
                 4679*************9877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (485 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       562  (0.0313459); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 3530.30
//
Query:       EPX72759.1  [L=487]
Description: protoporphyrinogen oxidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.2e-27   96.0   0.0    3.7e-27   95.7   0.0    1.1  1  Amino_oxidase  Flavin containing amine oxidoreductase
    1.2e-10   41.4   0.0    5.8e-10   39.3   0.0    2.1  2  NAD_binding_8  NAD(P)-binding Rossmann-like domain
    4.7e-06   26.4   0.0    4.2e-05   23.3   0.0    2.1  2  DAO            FAD dependent oxidoreductase
     0.0048   16.9   0.1      0.011   15.8   0.1    1.6  1  COA2           Cytochrome C oxidase assembly factor 2
     0.0087   14.9   0.0      0.058   12.2   0.0    1.9  2  MCRA           MCRA family
     0.0088   15.3   0.0       0.07   12.3   0.0    2.1  2  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
  ------ inclusion threshold ------
      0.025   13.8   0.0      0.039   13.2   0.0    1.2  1  Thi4           Thi4 family


Domain annotation for each model (and alignments):
>> Amino_oxidase  Flavin containing amine oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.7   0.0   1.5e-30   3.7e-27       1     451 [.      10     482 ..      10     483 .. 0.83

  Alignments for each domain:
  == domain 1  score: 95.7 bits;  conditional E-value: 1.5e-30
                    HHHHHHHHHHHHTT..EEEEEEESSSSSBTTS-EEEET.......TEEEESS--EEET...TTHHHHHHHHHTTCCCCEE..EESCCGCEEEEETT CS
  Amino_oxidase   1 laGLaaArqLlsaG..fdVtvlEardrvGGRirtvrsd.......GylielGamwftg...agnpllellkelgledsls..lpdpgapkrvlskg 82 
                    +aGL++A +L++     ++ ++E ++r+GG++++v+ +       ++l+e+G+ ++++   ag ++  llk+l++e+s +  l+d++ +k++    
     EPX72759.1  10 IAGLSTAFYLSRLIptCQIDLYERDSRLGGWLQSVNIPtatsptgNVLFEQGPRTLRPsglAGLATVDLLKQLKMEKSIKpiLKDSSSAKNKYI-- 103
                    8**********99989999**********************99988*******************************99999888884444444.. PP

                    EECCTTEECHH.HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHT CS
  Amino_oxidase  83 grefpgdlspv.paewealleqgalsaellsleeklrlgleallqktldeldldskslaesleelgrrepgdvevwdrliepelfaklefasglfa 177
                      ++p +l+ v +++++al + ++ +     + +  ++ l  l+       + + ++ +es+ ++ +r++g+    +rli         + +g++a
     EPX72759.1 104 --YYPDRLNVVpSSGFQALKSVVQPA-----FRAVPYALLRDLF------QKKKVGNEDESIGSFMERRFGK-MFTHRLISS-------LINGIYA 178
                    ..458888999566688888811122.....2222222222222......4566789999************.889999996.......******* PP

                    STTTTCBHHHHTCCCC.HHHHHTSCCCEE...........................................TTHTHHHHHHHHH...TTTTEEEE CS
  Amino_oxidase 178 gdpselsaklalpllw.elegfggslllp...........................................rgGlsqlpealae...elrgldir 226
                    g++ +ls+ ++++  + + e + +s++l+                                           +gG+++++ +l +    ++++++r
     EPX72759.1 179 GNLYSLSMQSTMFGFLaDIERKYRSVILGivlasirgemlnekqkllktsllknehtnelfkslrsspmvslEGGIESIISHLNAdfsASSNVKVR 274
                    ***88888888766550567777777777******************************************************************* PP

                    TSEEEEEEEEETTCEEEEETTSTEEEESEEEE-S-HHHHHSSEEESCC.SHHHHHHHHHSEEEEEEEEEEEESSGGSGCSTSECE.....CECCCE CS
  Amino_oxidase 227 lntrVkeikregdgvtvtledgevveaDaVvvTvplgvlkailfsPpl.pdekaeairnlgfgsvnkvilefdrkfwednalgqg.....vlvsel 316
                    +n++V++++ ++++ ++++ +++   +D+ v +++ + l+      +l p ++ +     +++sv +v l ++ + +++ +  +g     +l ++ 
     EPX72759.1 275 FNQPVTRLALSASKDKIEVNNCQ---YDYSVFAMSSDSLS------ELlPCPAMN----TPTTSVYVVNLFYQDASVLSYKG-FGyltplHLPNNP 356
                    **********9999999877666...6*************......885544444....4**************99888765.4454556777777 PP

                    EETTTEEEEECCECCCSTTTEEEEEEEEEC.HHHHHHHTTS..-HHHHHHHHHHHHHHHHTGTSSTCSEEEEEECCTETTTSSSEEE.BTTHHHHH CS
  Amino_oxidase 317 tttlgeafissdfpsrappgkglvllvyvg.gdaanelesl..sdeelvqavlrdLrklfgeevpepkatlvtrWhtdplargsysyvsvgpghed 409
                       lg  f+s +    ++p +g  l+v++g  ++a++  s+  ++e  v+++++ +++ +g    +p  +     ++++++       ++ +gh++
     EPX72759.1 357 NHILGVVFDSEQ----SNPEQGAKLTVMMGgHNYAKDPKSIptTPEKAVSYATEAIKQSLG-IYTSPD-VANATLQRNCIP-------QYKVGHQH 439
                    777888888854....344444447999996777777666699******************.555555.5566677799**.......88887777 PP

                    HHHHHCH....HCSTTEEE.SGGGCTTTTTS.HHHHHHHHHHHHHHH CS
  Amino_oxidase 410 ydplakp....egdprlffAGehtsreypgt.vegAilSGlraAari 451
                      +  ++    + ++rl+++G++    y+g+ + ++il G ++A++i
     EPX72759.1 440 QLDNLQSwvddNLRGRLHLTGSW----YNGVsIGDCILNGYKTAQDI 482
                    77777777888************....99****************99 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.3   0.0   2.3e-13   5.8e-10       1      56 [.       5      69 ..       5      82 .. 0.86
   2 ?    0.5   0.0      0.29   7.5e+02       4      19 ..      68      83 ..      68      88 .. 0.83

  Alignments for each domain:
  == domain 1  score: 39.3 bits;  conditional E-value: 2.3e-13
                   EE--SHHHHHHHHHHHCC..TEEEEEE-SSSSSSGGG-EECE.......TTCEECTS---EEETT CS
  NAD_binding_8  1 IvGaGlsGlvaAylLaka..gfdvlllekrdrlGGraasyev.......pgvrvdygahifhgsg 56
                   I G+G++Gl++A +L++    ++++l+e+ +rlGG+++s+++       ++v ++ g++++++sg
     EPX72759.1  5 ICGGGIAGLSTAFYLSRLipTCQIDLYERDSRLGGWLQSVNIptatsptGNVLFEQGPRTLRPSG 69
                   67***************88799******************99766665334*********99875 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.29
                   -SHHHHHHHHHHHCCT CS
  NAD_binding_8  4 aGlsGlvaAylLakag 19
                   +Gl+Gl++  lL++ +
     EPX72759.1 68 SGLAGLATVDLLKQLK 83
                   7*******99999864 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.0   1.6e-08   4.2e-05       1      35 [.       2      39 ..       2      45 .. 0.90
   2 ?    0.8   0.0      0.11   2.9e+02     157     223 ..     267     324 ..     204     430 .. 0.61

  Alignments for each domain:
  == domain 1  score: 23.3 bits;  conditional E-value: 1.6e-08
                EEEEECTSHHHHHHHHHHHHT.T...EEEEESSSSTTSS CS
         DAO  1 dvviiGGGiiGlstAyeLarr.g...Vtllekgdiagsg 35
                +v+i GGGi+GlstA++L+r  +   + l+e+++++g g
  EPX72759.1  2 KVAICGGGIAGLSTAFYLSRLiPtcqIDLYERDSRLG-G 39
                59****************98886899*******9988.4 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.11
                 HHTT-EEEESECEEEEEEEETCEEEEEEECTEEE.EEEEEEEE--GGGHH.HHHTTCTTTSEEEEEEEE CS
         DAO 157 ealGveilegtevtgleeedgkvwgverttpgen.daadavVnaaGawsd.llgllkeldlpispvrgq 223
                 ++  v+++++ +vt+l     k  ++     + n  ++d+ V a+   sd l+   + l++p + +  +
  EPX72759.1 267 ASSNVKVRFNQPVTRLALSASK-DKI-----EVNnCQYDYSVFAMS--SDsLS---ELLPCPAMNTPTT 324
                 4556999999999999554322.344.....222113577888886..44233...2233433332222 PP

>> COA2  Cytochrome C oxidase assembly factor 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.1   4.3e-06     0.011       5      43 ..     284     322 ..     281     332 .. 0.88

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 4.3e-06
        COA2   5 lkasqkrklvnllfgttaliatatviipsllPCPamknp 43 
                 l as+ +  vn+  +   ++a+++  ++ llPCPam+ p
  EPX72759.1 284 LSASKDKIEVNNCQYDYSVFAMSSDSLSELLPCPAMNTP 322
                 667777777***************************988 PP

>> MCRA  MCRA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.0   2.3e-05     0.058       4      48 ..       3      45 ..       1      59 [. 0.88
   2 ?    0.2   0.0     0.098   2.5e+02     206     249 ..     255     298 ..     239     309 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2.3e-05
                EEEE--SHHHHHHHHHHHHTT---GGGEEEE-SS----------- CS
        MCRA  4 aylvGsGiasLaaAvyLirdakvpgenihileelkvaggsldgag 48
                + + G+Gia+L++A+yL r   +p  +i ++e+++ +gg l++ +
  EPX72759.1  3 VAICGGGIAGLSTAFYLSRL--IPTCQIDLYERDSRLGGWLQSVN 45
                5689*************985..999*************9988765 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.098
                 HHCCHHHH.HHHHHTT-EEE-SEEEEEEEEEEE.TTEEEEEEEEE CS
        MCRA 206 eslilPlv.kyLkeqgVdfqfntkVtdiefeeeeedkktvteiel 249
                 es+i+ l  ++  +++V+++fn  Vt + ++ + +dk+ v++ ++
  EPX72759.1 255 ESIISHLNaDFSASSNVKVRFNQPVTRLALSAS-KDKIEVNNCQY 298
                 566666641466789****************77.66888887766 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.3   0.0   2.7e-05      0.07       2      31 ..       2      33 ..       1      92 [. 0.85
   2 ?    0.5   0.0      0.11   2.8e+02      57     120 ..     240     320 ..     201     338 .. 0.61

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 2.7e-05
                 SEEEE--SHHHHHHHHHHHH..HTS-EEEEET CS
                 xxxxxxxxxxxxxxxxxxxx..xxxxxxxxxx RF
  Pyr_redox_2  2 dvvviGgGpAGlaaaltlaq..agakvtlvel 31
                 +v++ GgG+AGl++a +l++    +++ l+e+
   EPX72759.1  2 KVAICGGGIAGLSTAFYLSRliPTCQIDLYER 33
                 899***************99665888888853 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.11
                  H.....................HHHHCHHHHCCCCHCCTCEEEEESCEEEEETEEECTCEEEEEESEEEE---E..EE-BCTCTTC. CS
                  x.....................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxx RF
  Pyr_redox_2  57 s.....................evvkklnqgielllgeevvkidpgkkkvklekkkegdeekiaydklvlAtGs..sprdlgipGva 120
                  +                     +   + +++++++ +++v+++   + k k+      + ++ +yd+ v A+ s   + +l++p+++
   EPX72759.1 240 KslrsspmvsleggiesiishlNADFSASSNVKVRFNQPVTRLALSASKDKI------EVNNCQYDYSVFAMSSdsLSELLPCPAMN 320
                  3455555555555555444466333455667777777777777766644444......23468999999999864345555788774 PP

>> Thi4  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.5e-05     0.039      19      55 ..       2      39 ..       1      44 [. 0.93

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.5e-05
                EEEEE--SHHHHHHHHHHHHC.TTS-EEEEESSSS--T CS
        Thi4 19 DvvivGaGssGLtaayylakk.pdlkvailersvspGG 55
                 v+i G+G +GL++a+yl++  p  ++ + er   +GG
  EPX72759.1  2 KVAICGGGIAGLSTAFYLSRLiPTCQIDLYERDSRLGG 39
                699*****************************999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (487 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.41
# Mc/sec: 3524.16
//
Query:       EPX72760.1  [L=845]
Description: heat shock protein Lhs1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.2e-60  203.6   0.0    4.2e-60  203.6   0.0    2.5  3  HSP70     Hsp70 protein
  ------ inclusion threshold ------
        0.1   11.4   0.1        0.4    9.4   0.1    2.0  1  MreB_Mbl  MreB/Mbl protein


Domain annotation for each model (and alignments):
>> HSP70  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  203.6   0.0   4.6e-64   4.2e-60       2     387 ..      25     426 ..      24     451 .. 0.90
   2 !    4.5   1.8   0.00092       8.3     497     594 ..     566     669 ..     552     674 .. 0.81
   3 ?   -4.4   1.5      0.44     4e+03     565     591 ..     741     774 ..     710     814 .. 0.49

  Alignments for each domain:
  == domain 1  score: 203.6 bits;  conditional E-value: 4.6e-64
                 EEEEEXSSEEEEEEEETTEE.EEEXXTTSXSSEESEEEEXTTSEEETHHHHHCTTTTGGGEEEXGGGTTTXB.TTSHHHHHHHTTXS.SEEEEETTSBE CS
       HSP70   2 iGiDLGttnsvvavmeggki.evianeegnrttPsvvaFtkkerlvGeaAkrqavtnpkntvfsvKrliGrk.fsdpevqkeikelp.ykvvkkengka 97 
                 + iD Gt+ +  a +++g + e +     +r   s v+F+ +erl G  A + a++ p+  + +vK l+  + ++ + vqk i++ p  +++++++   
  EPX72760.1  25 LAIDYGTEWTKAALIKAGIPlELVLTRDTRRKEQSAVGFKGDERLFGVDAANLATRLPSHSIRNVKELLDASgLKSSLVQKYIQNNPaLQLQENDESIS 123
                 6799999999999999886548999999***************************************986542678889*9999877368899988899 PP

                 EEEEEETTE.EEEHHHHHHHHHHHHHHHHHHHHTSBEEEEEEEEXTTXXHHHHHHHHHHHHHTTXEEEEEEEHHHHHHHHHHTCCSSSCEEE..EEEEE CS
       HSP70  98 vveveaage.kftpeqisamvLkklketaeaylgkkvtdavitvPaYfndaqRqatkdAgkiAGLnvlRivNepTAaalaYGldkkdkernv..lvyDl 193
                 +v+  + g  ++t e+i am +++  + ae++ +++v+d v+tvP++fn+ qR     A++i   +vl ++ +   +al Y l ++ +e+ v  ++yD 
  EPX72760.1 124 GVSFVVSGSdSYTLEEIIAMTMEHYINLAEEMAQEPVNDLVLTVPPHFNEFQRSILLGAARILNKDVLALIDDGLSVALEYSLSRSFSEEPVhhIIYDA 222
                 9999999999**************************************************************************98855555449**** PP

                 XSSXEEEEEEEEE........TT....EEEEEEEEEETTXSHHHHHHHHHHHHHHHHHHHHSXXGGGSHHHHHHHHHHHHHHHHHTTTSSCSEEEEEEE CS
       HSP70 194 GggtfdvSilele........kG....vfevkaTagDthlGGedfDealvehlveefkkkegidlskdkkalqrlkeaaekaKkeLSsskqteinleie 280
                 G g+  + +++++        kG     ++ +a +   ++ G++  +++v+++ + f++k++idls++ +al rl+++a ++K  LS+  ++e+  +ie
  EPX72760.1 223 GSGSISATLVAIDavprgtsgKGknitRIRSLASSTTLDINGNELNRKIVNFMKDAFQQKHNIDLSHNGRALARLEKEALRVKHVLSA--NSEAYASIE 319
                 **********9986664443333442223445556666678***********************************************..899999999 PP

                 EEETTTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHHHHHCTEEGGGCSEEEEESGGGGSHHHHHHHHHHTT.CHHBSSSHTTTHHHHHHHHHHHHHCTC CS
       HSP70 281 tvdedgkdlseklsRakfeelvedllertlepvekalkdaklkkeeidevvlvGGstRiPkvqelvkelfg.kepsktvnpDeavaiGAAvqagvlsge 378
                  + e g d++ k++R+ fe+l+edl    + p+++al+ ++++ e +d+v+l GG++R+P +q++++++++  + sk+vn+Dea  +GAA+ ++ l+ +
  EPX72760.1 320 ELAE-GIDFRLKITRSLFESLCEDLAMSSVLPIKEALSKGNVSLEALDSVILHGGTSRVPFIQSAIHDYVKgDKISKNVNADEASVKGAAFYGASLTSS 417
                 9999.***************************************************************998799************************* PP

                 GCSHCCEEE CS
       HSP70 379 eevkdllll 387
                 ++vk+++++
  EPX72760.1 418 FRVKPVIVQ 426
                 ****99876 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.00092
                 ECCSSSBHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH..GGGSTHHHH....HHHHHHHHHHHCHTTSSCHHHHHHHHHHHHHH CS
       HSP70 497 easeglseeeiekmvkdaeesaeedkkkkeaieakneaeelvyslekkleee..aekvseaek....ekvesaieeLkeeleeeekeeieakteelkkv 589
                 +  ++ls+e  ++        + +dk+k+ +  a ne e+l+ys+++  +++    +++++e     +   + i++L + + ++e++ + ak+++l+ +
  EPX72760.1 566 KRYRELSDESLQSFSDRLALRSLKDKEKALHESALNEYESLLYSAQGLSDDDetLAFANSEESktlkQVAVEDIDWLLQDGPTAETKLVVAKQKKLADI 664
                 55567889999999999999999***********************999888553444444444665666678999999999999***********999 PP

                 HHHHH CS
       HSP70 590 vekia 594
                 +++i 
  EPX72760.1 665 IKSIS 669
                 98876 PP

  == domain 3  score: -4.4 bits;  conditional E-value: 0.44
                 HHHHCHTTSSC.......HHHHHHHHHHHHHHHH CS
       HSP70 565 eeLkeeleeee.......keeieakteelkkvve 591
                 ++L+++ ++++       ++e+ +kt++l+++++
  EPX72760.1 741 NSLEKHNSRAQyedpvmvTSEMDSKTKKLQNLLY 774
                 2222222111122222223333333333333333 PP

>> MreB_Mbl  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.1   4.5e-05       0.4     165     315 ..     252     407 ..     133     417 .. 0.73

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 4.5e-05
                 TEEEEEEEES-SHHHHHHHHHHHHH....HHHSEE-...-HHHHHHHHHHH-BSS--HHHHEEEEEEEETTTTCEEEEEEEHHHHHHHHHHHHHHHHHH CS
    MreB_Mbl 165 ggivtsksvrvaGdeldeaiikyir....kkynlli...GertaekikieigsavkeeeeekmeikGrdlvtglpkevevsseevrealkepvsaivea 256
                  ++ +s+++ + G+el+ +i+++++    +k+n+ +   G++ a+  k ++   +  + +++   +  +l++g+  +++++ +  ++  ++   + v  
  EPX72760.1 252 RSLASSTTLDINGNELNRKIVNFMKdafqQKHNIDLshnGRALARLEKEALRVKHVLSANSEAYASIEELAEGIDFRLKITRSLFESLCEDLAMSSVLP 350
                 4566788999**************8333357788773334455555566666666666777888888899**********9998888888888888999 PP

                 HHHHHHTS-HHHHHHHHHH-EEEESGGGGSBTHHHHHHHHHSS.-EEE-SSTTTHHHHHH CS
    MreB_Mbl 257 vkevLektppeLaadivdrgivltGGgallkgldkllseetgl.pvkvaedpltcvakGt 315
                 +ke+L k    L a     +++l GG++ +  +++ +++ ++  +++   ++ ++ +kG+
  EPX72760.1 351 IKEALSKGNVSLEA---LDSVILHGGTSRVPFIQSAIHDYVKGdKISKNVNADEASVKGA 407
                 9****999888875...4578999****99999999999886413444445555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (845 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1406  (0.0784204); expected 358.6 (0.02)
Passed bias filter:                      612  (0.0341346); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.75u 0.32s 00:00:01.07 Elapsed: 00:00:00.48
# Mc/sec: 5298.92
//
Query:       EPX72761.1  [L=154]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.7e-12   45.3   0.0    8.2e-12   44.5   0.0    1.4  1  Mso1_Sec1_bdg  Sec1-binding region of Mso1
    0.00083   19.7   8.2    0.00083   19.7   8.2    1.8  2  Mso1_C         Membrane-polarising domain of Mso1


Domain annotation for each model (and alignments):
>> Mso1_Sec1_bdg  Sec1-binding region of Mso1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.5   0.0   9.2e-16   8.2e-12       3      40 .]      11      47 ..       3      47 .. 0.91

  Alignments for each domain:
  == domain 1  score: 44.5 bits;  conditional E-value: 9.2e-16
  Mso1_Sec1_bdg  3 snlslssEkDGdteddTlvhraLvkYYdekgqpfPdWL 40
                    n +++ E+D ++ +dT+v r+++kYY ek  ++P+WL
     EPX72761.1 11 INRIRDPESD-NSIEDTHVARVMRKYYLEKTGNLPEWL 47
                   577778****.**************************9 PP

>> Mso1_C  Membrane-polarising domain of Mso1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.2       0.4   3.6e+03      46      47 ..      73      74 ..      54      92 .. 0.54
   2 !   19.7   8.2   9.3e-08   0.00083       8      62 ..      91     145 ..      79     146 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.4
      Mso1_C 46 pa 47
                pa
  EPX72761.1 73 PA 74
                33 PP

  == domain 2  score: 19.7 bits;  conditional E-value: 9.3e-08
      Mso1_C   8 easPsrtYt.RSssRlqdmyn..ssrdqsipgaGynsqSYppartnsssatdsgsrLR 62 
                  +sPs+  t   s R + m++  s++d++++g+G++++S ++ ++  ss+   + +LR
  EPX72761.1  91 SSSPSV-PTpSTSTRKPPMQHshSTFDDLFEGVGSLQRS-QTGTSAASSS-AASGLLR 145
                 799999.5545699*****973368**************.7776666664.4555777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       460  (0.0256568); expected 358.6 (0.02)
Passed bias filter:                      258  (0.0143901); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.45
# Mc/sec: 1017.86
//
Query:       EPX72762.1  [L=1821]
Description: formin Cdc12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-84  283.7   3.1    9.9e-84  281.6   3.1    2.2  1  FH2       Formin Homology 2 Domain
    5.3e-22   78.4   4.2    5.3e-22   78.4   4.2    3.4  3  Drf_FH3   Diaphanous FH3 Domain
    1.9e-11   43.9   0.0    1.9e-11   43.9   0.0    4.2  4  Drf_GBD   Diaphanous GTPase-binding Domain
  ------ inclusion threshold ------
        3.6    8.3  10.1        2.7    8.7   3.2    4.2  4  SlyX      SlyX


Domain annotation for each model (and alignments):
>> FH2  Formin Homology 2 Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  281.6   3.1   2.2e-87   9.9e-84       3     372 .]    1023    1407 ..    1021    1407 .. 0.93

  Alignments for each domain:
  == domain 1  score: 281.6 bits;  conditional E-value: 2.2e-87
                  XX---SS-B------EESSGGCTTSCCCCTCCHHHHC......TSHHHHHHHHTBSC--HCCH......HCSCCTTCCESSS-HHHHHHHHHHHHHH CS
         FH2    3 kkikpkkkLkplhWdkvkpsqdrstvWdklkeesfek......eldlseleelFsakekkkkkkksekskkskkkkkkvklLdpkrsqniaIlLkkl 93  
                  + ++pk++Lk++hW+++++  + + +W+ ++++s         ++ ++++ee+F++ke+k         + +kk  ++++++++++++ ++I+++kl
  EPX72762.1 1023 NMERPKRRLKQMHWERLDSGLEYT-FWSVTSQQSSSLfeklkdSGTFEQIEENFAMKEAK---------PLQKKGAQRTEYMSSDLQKLFGIHFHKL 1109
                  5689******************86.***999998877899999***************98.........677889********************** PP

                  .TS-HHHHHHHHHTTTTCCCT..........HHHHHHHHHHCGGHHHHHHH.H..CTCTSGTTB-HHH.HHHHHHTT.STTHHHHHHHHHHHHTHHH CS
         FH2   94 .kltaeeiveaileldeeald..........lellenLlkmaPtkeelkkl.k..eykgevseLseae.qFllelvk.iprlekRleallfkstfee 174 
                   +++++ei++++l++de++ +          l++++  ++  P+  +++   +  + ++++seLs+++  +l  +v+  +++  R++al++k t+++
  EPX72762.1 1110 aHKNPDEIIRMVLHCDESISEateflgsekiLNQVKLKADLEPYRIDWTNGgEsvNAEKDPSELSRWDyLYLRLIVDlQNYWGRRINALKIKYTIDT 1206
                  *****************8877877666655444444444556666666655524466777************************************* PP

                  HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHSTCSTTCS-SEE-GGGGGGCCCSB-STTTSBHHHHHHHHHHTTSGGGGGHHHHTTTHH CS
         FH2  175 eveelkrslealeaaseeLknskkfkklLeliLalGNymNdgtrrgqAkGFkLssLlkLsdvKstdnkttLLHylvkiireklpevldfsseLknvk 271 
                  ++e l r+ + + +a   L+++++fk l++liL+lGN+mNd+   +qA GF+L+sL++L+ +K+++n+++LLH+l+ i+r+++p+ + f  +L+ v 
  EPX72762.1 1207 NYETLVRQAKLIGRAALVLRDNETFKDLMHLILCLGNFMNDYI--RQARGFSLNSLQRLPLIKNSSNTQSLLHVLEMIVRKNFPSTEAFLTQLSVVI 1301
                  *****************************************88..8*************************************************** PP

                  HCCTS-HHHHHHHHHHHHHHHHHHHHHHHHCCT....TSSTT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TT.CCHHHHHHHH CS
         FH2  272 kaakvnleslekevkklekglkklekelessek....keepsdkflevlkeflkeaeeklkkleeelkeakelvkelveYfgedkk.evspeeffki 363 
                  +a+k+n+e++e+e+ +l +g+++++ +++s+      +++p+dk+l+v+ ++l+e+ +k++ l+e+l++++++++++++Yfge+++ +  ++ ffk+
  EPX72762.1 1302 EASKLNIETIEQECTELIRGCQNVRLDCDSGVLsdptSFHPDDKILTVIIPWLNEGVKKMDFLKEHLRTMNTTLNNAMRYFGEQPSdPNARNVFFKK 1398
                  *******************************999999************************************************999********* PP

                  HHHHHHHHH CS
         FH2  364 lreFlkefk 372 
                  +++F++e+k
  EPX72762.1 1399 ISSFISEYK 1407
                  *******97 PP

>> Drf_FH3  Diaphanous FH3 Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.4   4.2   1.2e-25   5.3e-22      14     195 .]     488     666 ..     477     666 .. 0.90
   2 ?   -2.6   0.1      0.79   3.5e+03     139     169 ..    1255    1284 ..    1251    1285 .. 0.82
   3 ?   -2.8   2.0      0.87   3.9e+03      78     123 ..    1441    1490 ..    1436    1570 .. 0.62

  Alignments for each domain:
  == domain 1  score: 78.4 bits;  conditional E-value: 1.2e-25
                 HHCCT-.SSTTHHHHHHHHH.HSS-HHHHHHHHHHHHHHHHSSSSHHHHHHHHHHHHCTTHHHHHHHHCTSCSHHHHHHHHHHHHHHHHHHHHHHHHHT CS
     Drf_FH3  14 kevaee.rgrfrslvgaldelenelveykvatmllInalvnspedlqfRlhLRseflalGLdkiidklreleneeLddqlqafeeerneDeeellerae 111
                 ke  ++ ++  ++l   ++ ++ +++ey+++tm +In+ v+  edl     +   +   G++++i+ lr++ +++L++ql+++e+e++    ell+ +e
  EPX72762.1 488 KEISRTpPSSPSKLATLSSPSNIAFLEYCTSTMDFINHYVSVYEDLSSDFNVLECLQDSGIHEVIQHLRNFPDKQLERQLNIYETEEE-RRTELLTPLE 585
                 555555466667777777777999****************************************************************.8899999999 PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
     Drf_FH3 112 dktvdlddpeelfellknkvkdteaepyllsilqhlllirddeeekesylklleelvsqivlqrtkidpkkderkslevaieeL 195
                 d +  ++  ++++++l n+v ++e  ++l s++q  ll++ +e+ek +  k++++l+++ +l+++ +++ +  ++sl+vai++L
  EPX72762.1 586 DGDSFISHESSILSNL-NEVASNELGTLLESTIQSVLLTKANEKEKLKLVKVFNSLLQKFLLNSKISENTF--EESLQVAISSL 666
                 9***************.**********************************************99877755..56799988876 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.79
                  XXXXXXXXXXX..XXXXXXXXXXXXXXXXXX CS
     Drf_FH3  139 yllsilqhlllirddeeekesylklleelvs 169 
                    l+ lq+l li +++++ +s l +le +v+
  EPX72762.1 1255 FSLNSLQRLPLI-KNSSNTQSLLHVLEMIVR 1284
                  56899******9.888999999999998875 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 0.87
                  HHHCTSCSHHHHHHHHHHHHHHHHHHHHHHHHHT....XXXXXXXXXXXX CS
     Drf_FH3   78 dklreleneeLddqlqafeeerneDeeellerae....dktvdlddpeel 123 
                   +  ++en+e+d+ l++ ++ + +  ++l++r+     +++v+ +++++ 
  EPX72762.1 1441 SEKDTSENREMDNFLNKLRDIKLDGHNRLRRRLPtndnTENVESSNMKNA 1490
                  55567799999999999999999999999988776655555554444433 PP

>> Drf_GBD  Diaphanous GTPase-binding Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.9   0.0   4.3e-15   1.9e-11       4     187 ..     269     445 ..     266     446 .. 0.90
   2 ?   -3.2   0.9       1.2   5.2e+03      43      80 ..     682     719 ..     626     758 .. 0.61
   3 ?   -1.9   0.2      0.47   2.1e+03      41      82 ..    1402    1437 ..    1388    1484 .. 0.75
   4 ?   -1.2   5.4      0.28   1.3e+03      35      84 ..    1560    1613 ..    1522    1669 .. 0.79

  Alignments for each domain:
  == domain 1  score: 43.9 bits;  conditional E-value: 4.3e-15
     Drf_GBD   4 pdeeeidklFeelleel..nlpeekreallalpiekKwqlvvqdkkkkakkeeklsksksksneeespesyvkklkddslkekqlesLrVaLrtqplsW 100
                 p+ e++++lF++ l     + ++++   l +  +++Kw+++    +  +       ++ + +  ++ ++++v +l ++++++ ql  L+  L tq+ +W
  EPX72762.1 269 PSLEQLLHLFNDFLRHPmfDFDDHAITLLQTCTPDEKWNFIRASFSGFDDP---AFQIPELAAVHRPVSWFVLQLWNKTISNLQLITLSSLLITQSNRW 364
                 56678889999999875589999999999************9999854444...57888999999999******************************* PP

     Drf_GBD 101 vkrFieleGlvaLlnvLskinekkaeeeedlkkeyeiikClKalmNnkvGldavlahksvikllaqsldserlktrklvlelLtalc 187
                 v +F+el+Gl a+ n+L+  n+ +  +     ++ e+++C   lm ++     + +++++++++ q+l s++l  rk  +++L+  c
  EPX72762.1 365 VSSFLELQGLRAIHNLLTYFNSSTVVQ----SQQSELLRCVFQLMKKRA--TLATSDSYIFSSVTQALGSTNLLPRKVTADILSWAC 445
                 ************************999....99************9985..56779***************************9877 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.2
     Drf_GBD  43 vqdkkkkakkeeklsksksksneeespesyvkklkdds 80 
                 + + +++  ++  +++   +++ +  +e++++klk++ 
  EPX72762.1 682 EAKASRSMAEKMVIERDAMAAQVNLGAEDLIEKLKSEL 719
                 23333333333444455555555555555555555544 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 0.47
     Drf_GBD   41 lvvqdkkkkakkeeklsksksksneeespesyvkklkddslk 82  
                  ++  +k +ka++       k++++ +++ + yvkk k++ l+
  EPX72762.1 1402 FISEYKRAKAENL------KTEEEISQKEKVYVKKGKSKVLE 1437
                  5555555444444......88888888888888887776554 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 0.28
     Drf_GBD   35 iekKwqlvvqdkkkkakke....eklsksksksneeespesyvkklkddslkek 84  
                   ++K +l++ +  k   ++     +++++++++ + +s++ +v+  kd+++++k
  EPX72762.1 1560 HSNKENLIQAQTRKGTTSKksmpATRTDKNNANRRRKSSKKFVDVNKDNDVHTK 1613
                  567888887665544444446777777788888888888888888888887764 PP

>> SlyX  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   3.2   0.00061       2.7      16      57 ..     709     750 ..     707     756 .. 0.89
   2 ?   -0.3   0.0      0.37   1.7e+03      37      57 ..     809     829 ..     805     837 .. 0.81
   3 ?   -1.5   0.1      0.89     4e+03      16      46 ..    1291    1321 ..    1289    1328 .. 0.86
   4 ?   -2.8   0.0       2.3     1e+04      32      49 ..    1360    1377 ..    1358    1388 .. 0.57

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00061
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-XXXXXXXXXX CS
        SlyX  16 edtieeLndvvaeqqqqidrlqrqlrllaerlkeleessgas 57 
                 ed+ie+L  ++ +q++ i  ++r  + l+++++++++s+ a+
  EPX72762.1 709 EDLIEKLKSELNDQNDVILSQKRTNETLRKEVEDMQKSHLAQ 750
                 999********************************9987654 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.37
                 HHHHHHHHHT-XXXXXXXXXX CS
        SlyX  37 qrqlrllaerlkeleessgas 57 
                  ++l+ l+e++++l+++++++
  EPX72762.1 809 SEKLKNLREKMNNLSAENQST 829
                 689999*****9999998765 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 0.89
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT CS
        SlyX   16 edtieeLndvvaeqqqqidrlqrqlrllaer 46  
                  e ++ +L+ v+ +    i+ +++++ +l + 
  EPX72762.1 1291 EAFLTQLSVVIEASKLNIETIEQECTELIRG 1321
                  788999*******************999765 PP

  == domain 4  score: -2.8 bits;  conditional E-value: 2.3
                  HHHHHHHHHHHHHHT-XX CS
        SlyX   32 qidrlqrqlrllaerlke 49  
                  ++d l+++lr ++  l++
  EPX72762.1 1360 KMDFLKEHLRTMNTTLNN 1377
                  455555555555555543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1821 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1710  (0.0953762); expected 358.6 (0.02)
Passed bias filter:                      288  (0.0160634); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.05u 0.30s 00:00:01.35 Elapsed: 00:00:00.51
# Mc/sec: 10801.13
//
Query:       EPX72763.1  [L=382]
Description: FAD-dependent oxidoreductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      3e-52  178.4   0.0    3.4e-52  178.2   0.0    1.0  1  DAO            FAD dependent oxidoreductase
    0.00052   20.0   0.0     0.0081   16.2   0.0    2.4  2  NAD_binding_9  FAD-NAD(P)-binding
     0.0061   16.8   0.0      0.013   15.7   0.0    1.7  1  NAD_binding_8  NAD(P)-binding Rossmann-like domain
  ------ inclusion threshold ------
      0.032   13.8   0.0       0.06   12.9   0.0    1.4  1  RAG1_imp_bd    RAG1 importin binding
      0.045   13.0   0.0       0.76    8.9   0.0    2.1  2  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase


Domain annotation for each model (and alignments):
>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.2   0.0   9.6e-56   3.4e-52       2     352 .]       7     361 ..       6     361 .. 0.79

  Alignments for each domain:
  == domain 1  score: 178.2 bits;  conditional E-value: 9.6e-56
                 EEEECTSHHHHHHHHHHHHTT........EEEEESSSSTTSSGGGSSEEEEESSSSTHHSTHHHHHHHHHHHHHH.HHHHHHHSSTTSEEEEEEEEEES CS
         DAO   2 vviiGGGiiGlstAyeLarrg........VtllekgdiagsgaSgrnsgllhsglrylpeaselarlslealeel.releeelgididyrrtGllslaa 91 
                 +vi+GGG++G s+ y+L  ++        +tl+e++  ++s+aSg++sg+l+  ++  p+ s la ls+ +++ l +el+++    ++yr   + s+ a
  EPX72763.1   7 IVIVGGGVTGTSCLYFLVNHPnfnrerdtITLFESS-GIASAASGKASGFLSLEWH-GPSTSSLAALSYNLHKQLaDELDGHKK--WGYRALDTWSIKA 101
                 9****************99866778889********.6666**************9.888789********99999****9854..***********87 PP

                 SHHHHHHHHHHHHHHHHTTTTEEEEEHHHHHHHSTTSTTTSEEEEETTEEEEEHHHHHHHHHHHHHHTT.-EEEESECEEEEEEEE....TCEEEEE.. CS
         DAO  92 deeelealdkllallleagldaelldaeevrelepalpgllgalfypdtgqvdpakltaalaraaealG.veilegtevtgleeed....gkvwgve.. 183
                 de    ++      + ++ ++ e+++++ + e+     +l g    ++++qv+p+k+++++ ++a + + v++++g  v +++e++             
  EPX72763.1 102 DE----KC----THPDKLSPEIEWIEPS-IVEKVT---RL-G--NKKNSAQVHPYKFCHSIFEEASKVAnVNLVKG-HVISVDENEveyrL-----Ige 179
                 64....33....23344667789****8.555553...22.2..25788***************988766******.88888664334320.....133 PP

                 ........EECTEEEE...........EEEEEEE--GGGHH.HHHTTCTTTSEEEEEEEEEEEEEECCTHSTGSGCSEEEEE.EEETTTTEEEEEETTS CS
         DAO 184 ........rttpgend...........aadavVnaaGawsd.llgllkeldlpispvrgqvlvlkplseklvspaailpvpe.tdddgrgvyvtprkdg 261
                         +    + +           +a +v++aaG+w+  l+   ++l  +i ++r +++++  l+  l   +a++ + +  d   + +++++r+ +
  EPX72763.1 180 dyapdeeeE----I-TsveelhtihsmEASHVIVAAGPWTPhLI---PNL--RICGARIHSITV-DLPMRL-NGNAVFSEIVyADGTVGAPEFYARE-D 265
                 344432221....2.1234455566555577**********999...999..9***********.444433.3336666666888888999999996.8 PP

                 EEEEEESSE....EETTCSSTSCSHHHHHHHHHHHHHHSGGG..CGEEEEEEEEEE..ETTSSEEEEEEETEEEEEEEEECTTTHHHHHHHHHHHHHHH CS
         DAO 262 rvlvGgtad....eesgdddpevdeedidellealrklfPql..gdvlrkwaGlrp..lpdglpligetpgvkglylatGhsghGltlapatGkllael 352
                 +++v+g+ d    +e + ++ +vd+ +++++ e + ++ P +  ++v+ ++a+++p  +  g p+ig+    + +y+a+ h+++G+tl+p+tGk+l+e+
  EPX72763.1 266 ELYVCGEFDdeplPELSSET-KVDQGRCQAIKECADHFHPVIrdSKVKVRQACYLPisNATGAPVIGKI--GSSIYVAAAHGCWGITLGPGTGKVLSEM 361
                 8***9999889888888888.********************62355999*******755899******5..68**********************9986 PP

>> NAD_binding_9  FAD-NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   2.3e-06    0.0081       1      37 [.       8      45 ..       8     112 .. 0.90
   2 ?    1.4   0.0     0.078   2.8e+02     104     140 ..     144     180 ..     132     212 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 2.3e-06
  NAD_binding_9  1 aivGaGprGlavlerLlara.kkkspleitlfdpsepg 37
                   +ivG+G++G+++l  L+++   ++++ +itlf+ s++ 
     EPX72763.1  8 VIVGGGVTGTSCLYFLVNHPnFNRERDTITLFESSGIA 45
                   7*******************999999*******99885 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.078
  NAD_binding_9 104 feellarlpegvtvevhraevvdleeradgqavllad 140
                     +++ +++++  +v++++++v++++e++ +++++ +d
     EPX72763.1 144 CHSIFEEASKVANVNLVKGHVISVDENEVEYRLIGED 180
                    5667778888889999999999999999888776655 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   3.7e-06     0.013       1      39 [.       9      51 ..       9      83 .. 0.67

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 3.7e-06
                   EE--SHHHHHHHHHHHCC.TE.....EEEEE-SSSSSSGGG-EEC CS
  NAD_binding_8  1 IvGaGlsGlvaAylLaka.gf.....dvlllekrdrlGGraasye 39
                   IvG+G++G ++ y+L ++ +f      ++l+e++      aas +
     EPX72763.1  9 IVGGGVTGTSCLYFLVNHpNFnrerdTITLFESSGIA--SAASGK 51
                   9***************98844334446*****97554..344444 PP

>> RAG1_imp_bd  RAG1 importin binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   1.7e-05      0.06     145     178 ..     120     153 ..     113     173 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.7e-05
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  RAG1_imp_bd 145 PdlilkvfkvDvkeDvesvHPteFCHrCwsviir 178
                  P ++ kv ++  k++   vHP +FCH+ ++ + +
   EPX72763.1 120 PSIVEKVTRLGNKKNSAQVHPYKFCHSIFEEASK 153
                  899***********************99887766 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.0   0.00021      0.76       2      21 ..       6      25 ..       2      78 .. 0.76
   2 ?    2.0   0.0     0.028     1e+02      66     119 ..     156     221 ..     101     251 .. 0.58

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00021
                 SEEEE--SHHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2  2 dvvviGgGpAGlaaaltlaq 21
                 ++v++GgG+ G+++  +l +
   EPX72763.1  6 NIVIVGGGVTGTSCLYFLVN 25
                 45555555555555555554 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.028
                  HCCCCHCCTCEEEEESCEEEEETEEEC..............TCEEEEEESEEEE---EEE-BCTCTTC CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxx..............xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2  66 gielllgeevvkidpgkkkvklekkke..............gdeekiaydklvlAtGssprdlgipGv 119
                  ++ l++g +v+++d+++ ++ l  ++                  +++++ ++++A G ++  l ip +
   EPX72763.1 156 NVNLVKG-HVISVDENEVEYRLIGEDYapdeeeeitsveelHTIHSMEASHVIVAAGPWTPHL-IPNL 221
                  2333333.4444444443333333222343333333333334455677789999998655444.4444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       403  (0.0224776); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 2648.48
//
Query:       EPX72764.1  [L=498]
Description: protein disulfide isomerase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.3e-64  213.3   2.9    1.1e-29  102.4   0.0    3.9  4  Thioredoxin    Thioredoxin
    7.2e-38  130.3   7.8    5.2e-25   88.4   0.6    3.2  3  Thioredoxin_6  Thioredoxin-like domain
    5.3e-12   45.7   1.6     0.0011   18.4   0.0    3.3  3  OST3_OST6      OST3 / OST6 family, transporter family
    1.8e-10   41.0   2.2     0.0012   19.1   0.1    5.1  5  Thioredoxin_8  Thioredoxin-like
    1.9e-10   40.4   0.7    7.7e-08   31.8   0.2    2.2  2  Calsequestrin  Calsequestrin
    3.7e-09   37.0   1.0    0.00052   20.4   0.0    3.6  3  Thioredoxin_2  Thioredoxin-like domain
    3.9e-09   36.6   0.1    9.2e-05   22.6   0.0    2.6  2  Thioredoxin_7  Thioredoxin-like
    3.2e-08   33.5   1.5     0.0066   16.4   0.0    3.3  3  AhpC-TSA       AhpC/TSA family
    3.1e-06   27.0   2.2      0.022   14.5   0.0    3.5  3  Redoxin        Redoxin
     0.0027   17.4   0.1       0.38   10.4   0.0    3.5  4  Thioredoxin_5  Thioredoxin
  ------ inclusion threshold ------
      0.076   12.8   0.0        8.3    6.1   0.0    2.6  2  DSBA           DSBA-like thioredoxin domain
      0.078   12.8   6.7       0.28   11.0   0.0    3.6  3  TraF           F plasmid transfer operon protein
      0.099   12.6   0.2        1.2    9.2   0.0    2.8  4  HyaE           Hydrogenase-1 expression protein HyaE
       0.12   12.5   5.2       0.22   11.7   1.1    3.3  4  Thioredoxin_4  Thioredoxin
        3.7    7.8   5.4         25    5.2   0.5    3.6  2  Glutaredoxin   Glutaredoxin


Domain annotation for each model (and alignments):
>> Thioredoxin  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.4   0.0   9.1e-33   1.1e-29       6     103 .]      28     125 ..      23     125 .. 0.92
   2 ?   -1.0   0.0       1.5   1.8e+03       8      54 ..     137     178 ..     130     224 .. 0.64
   3 !   10.1   0.0    0.0005       0.6      38      82 ..     267     312 ..     263     335 .. 0.82
   4 !   98.7   0.1   1.4e-31   1.6e-28       3     103 .]     358     459 ..     356     459 .. 0.93

  Alignments for each domain:
  == domain 1  score: 102.4 bits;  conditional E-value: 9.1e-33
                  SHHHHHHHHTTTSSEEEEEEE-TTSHHHHCHHHHHHHHHHHCTT.TSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTEEEEEEESS-HHHHHHHHHH CS
  Thioredoxin   6 tkenFeeevakekklvlveFyApwCghCkalaPeleklaeelkd.kvklakvdvdenedlakkyevegiPtlklfkngkevkkyegarekeklaaflk 102
                  +k+  +e +++ ++l++ +FyApwCghC alaPe+e +aeel++ ++ +++vd++e++dl+++y+++g+Ptl +fkng+ +++y+g r +++l++++k
   EPX72764.1  28 NKAGLQELLNA-DNLFMTKFYAPWCGHCNALAPEYELAAEELEKdNISMVEVDCTEETDLCNEYNIRGYPTLTVFKNGDVSSQYSGPRRHDALVKYMK 124
                  55555555555.9*****************************999***************************************************98 PP

                  H CS
  Thioredoxin 103 k 103
                  k
   EPX72764.1 125 K 125
                  6 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 1.5
                  HHHHHHHTTTSSEEEEEEE-TTSHHHHCHHHHHHHHHHHCTTTSEEE CS
  Thioredoxin   8 enFeeevakekklvlveFyApwCghCkalaPeleklaeelkdkvkla 54 
                  +n ++  +++++l +v F+ +      +l+ +++++ae lkd + +a
   EPX72764.1 137 DNIDTFTESSEDLAVVGFFDD-----EKLNATYTDVAESLKDAFAFA 178
                  555555555555555555544.....467777777777777766665 PP

  == domain 3  score: 10.1 bits;  conditional E-value: 0.0005
                  HHHHHHHHHCTTTSEEEEEETTTSHHHHHHTT-SS.SSEEEEEETT CS
  Thioredoxin  38 Peleklaeelkdkvklakvdvdenedlakkyeveg.iPtlklfkng 82 
                   +++ la++++d+v++a +d+     +ak+++ve+  P++++++ +
   EPX72764.1 267 NVFQPLAKQYQDTVRFAFLDALRYGAVAKQMNVESnWPAFVITHLD 312
                  57899****************************8637999887655 PP

  == domain 4  score: 98.7 bits;  conditional E-value: 1.4e-31
                  EESSHHHHHHHHTTTSSEEEEEEE-TTSHHHHCHHHHHHHHHHHCTT..TSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTE..EEEEEESS-HHHH CS
  Thioredoxin   3 lvltkenFeeevakekklvlveFyApwCghCkalaPeleklaeelkd..kvklakvdvdenedlakkyevegiPtlklfkngk..evkkyegarekek 96 
                   v++++n+++ v ++ k+vlveFyApwCghCk+laP++e+lae+++d  +v++akvd++en     +++++g+Pt++lfk+++  ++  yeg r+ e+
   EPX72764.1 358 TVVVADNYNQVVLDSTKDVLVEFYAPWCGHCKNLAPTYESLAEKYADnkNVVVAKVDATEN---DLDVSISGFPTIMLFKANDkeNPLFYEGDRSLED 452
                  567899*****************************************99***********9...46788***********9997778889******** PP

                  HHHHHHH CS
  Thioredoxin  97 laaflkk 103
                  + +f++k
   EPX72764.1 453 MSSFIEK 459
                  ***9985 PP

>> Thioredoxin_6  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.7   0.1   9.3e-10   1.1e-06      10     104 ..      59     156 ..      55     161 .. 0.84
   2 !   88.4   0.6   4.4e-28   5.2e-25       5     184 .]     157     335 ..     154     335 .. 0.93
   3 !   17.9   0.3   1.9e-06    0.0023       7      75 ..     390     461 ..     388     477 .. 0.84

  Alignments for each domain:
  == domain 1  score: 28.7 bits;  conditional E-value: 9.3e-10
                    HHHHHHTTT-T.T....SEEEEE--HHHHHHTT--S.SEEEEEETTTTEEEEEETHT--HHHHHHHHHHH---SEEE-SHHHHHHHHTSS--EEEE CS
  Thioredoxin_6  10 eiFekvakelkgd....vrfgvtkskevadklgvke.pavllfrkfdeekvkydgekitvddlkkfieknslplvreltpenaeelfeeglpplll 100
                     ++e +a+el++d    v++ +t ++++++++++++ p++++f++ d +  +y+g     d l+k ++k+  p+v+ ++++n ++++e+   ++++
     EPX72764.1  59 PEYELAAEELEKDnismVEVDCTEETDLCNEYNIRGyPTLTVFKNGDVS-SQYSGP-RRHDALVKYMKKQLQPVVQSVSKDNIDTFTESSEDLAVV 152
                    5799999999999844445556778889999**************6665.99***7.89*****************************99888888 PP

                    EEE- CS
  Thioredoxin_6 101 lflk 104
                     f++
     EPX72764.1 153 GFFD 156
                    7774 PP

  == domain 2  score: 88.4 bits;  conditional E-value: 4.4e-28
                    TSTHHHHHHHHTTT-T.TSEEEEE--HHHHHHTT--SSEEEEEET...TTTEEEEEETHT--HHHHHHHHHHH---SEEE-SHHHHHHHHTSS--E CS
  Thioredoxin_6   5 dkeeseiFekvakelkgdvrfgvtkskevadklgvkepavllfrk...fdeekvkydgekitvddlkkfieknslplvreltpenaeelfeeglpp 97 
                    d+++  ++  va++lk  ++f+ +++k++a+ lgv++p ++ f k   +d++k+ y+g+   + d+ +f+   s+pl  el+++++ ++ ++glp 
     EPX72764.1 157 DEKLNATYTDVAESLKDAFAFASSSDKDFAKSLGVPFPGLVAFTKdpaQDSNKIVYKGQ-WQKGDIGDFLGFSSIPLLDELNQMTFMRYHSSGLP- 250
                    46899***********77**************************77779999******8.89*******************************88. PP

                    EEEEEE-TTSTTHHHHHHHHHHHHHHTTTT-EEEEEETTGGHHHHHHTT--GGG-SEEEEEESSSS-EEEET.TSS--HHHHHHHHHH CS
  Thioredoxin_6  98 llllflkkddeeteklkkaiekvakefkdkinfaladaksfkrpleylglsssdlPvivivdsashkykypp.kdefspeklkeFlkd 184
                    l ++f++ ++e+ ++l ++++ +ak+++d + fa++da +++ + +++++  s  P++vi +  ++ +k+p+ + +++ +++ +F+k+
     EPX72764.1 251 LGIIFYN-STESRDELYNVFQPLAKQYQDTVRFAFLDALRYGAVAKQMNVE-SNWPAFVITH-LDKFLKFPYpNSDLTSKNMAKFVKE 335
                    9999**7.799****************************************.*******777.556666776699**********985 PP

  == domain 3  score: 17.9 bits;  conditional E-value: 1.9e-06
                    THHHHHHHHTTT-T.TSEEEEE--HHHHHH...TT--S.SEEEEEETTTT.EEEEEETHT--HHHHHHHHHHH- CS
  Thioredoxin_6   7 eeseiFekvakelkgdvrfgvtkskevadk...lgvke.pavllfrkfde.ekvkydgekitvddlkkfiekns 75 
                    +++ ++e+ a+++  d   +v+ + ++++    + +++ p++ lf+++d+ ++  y+g+  + +d+++fiek+s
     EPX72764.1 390 NLAPTYESLAEKYA-DNKNVVVAKVDATENdldVSISGfPTIMLFKANDKeNPLFYEGD-RSLEDMSSFIEKHS 461
                    56779999999999.877777777888887878888888*******9555277778887.8***********97 PP

>> OST3_OST6  OST3 / OST6 family, transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   5.1e-06    0.0062      46     144 ..      51     134 ..      41     155 .. 0.80
   2 !    8.8   0.3   0.00077      0.92      53     146 ..     266     348 ..     256     362 .. 0.77
   3 !   18.4   0.0   8.9e-07    0.0011      46     138 ..     385     462 ..     356     476 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 5.1e-06
   OST3_OST6  46 CelCrefepefelvakswrkdekskskklfFakvdfdegkdvFqklglnsaPhlllfppkkgpkeskkkdtydfsrggfdaealakfisertgvkirik 144
                 C  C+ ++pe+el a+   kd      ++  ++vd  e  d+ ++++++  P l +f+  +       + +y  +    + +al+k++++++++ ++  
  EPX72764.1  51 CGHCNALAPEYELAAEELEKD------NISMVEVDCTEETDLCNEYNIRGYPTLTVFKNGD------VSSQYSGP---RRHDALVKYMKKQLQPVVQSV 134
                 99******************9......7*****************************9933......34555544...356666777777777555544 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00077
   OST3_OST6  53 epefelvakswrkdekskskklfFakvdfdegkdvFqklglns.aPhlllfppkkgpkeskkkdtydfsrggfdaealakfisertg..vkirikrp 146
                 ++ f+ +ak+        ++++ Fa +d  +   v ++++++s  P +++ +     +   k+ +++ ++++ + +++akf++e t+   + +ik +
  EPX72764.1 266 YNVFQPLAKQ-------YQDTVRFAFLDALRYGAVAKQMNVESnWPAFVITHL----D---KFLKFPYPNSDLTSKNMAKFVKEYTDgkLQPKIKSQ 348
                 4444444444.......456699******************863788888877....3...899******999*************96555666554 PP

  == domain 3  score: 18.4 bits;  conditional E-value: 8.9e-07
   OST3_OST6  46 CelCrefepefelvakswrkdekskskklfFakvdfdegkdvFqklglnsaPhlllfppkkgpkeskkkdtydfsrggfdaealakfisertg 138
                 C  C++++p +e +a+ +  +     k+++ akvd  e+     ++ ++  P ++lf+++++++         f +g+ + e++ +fi+++  
  EPX72764.1 385 CGHCKNLAPTYESLAEKYADN-----KNVVVAKVDATENDL---DVSISGFPTIMLFKANDKEN-------PLFYEGDRSLEDMSSFIEKHSS 462
                 ******************999.....69*********9986...6778999********55333.......5556666799999999999987 PP

>> Thioredoxin_8  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.0   0.00026      0.31       7      49 ..      45      86 ..      39      90 .. 0.86
   2 ?    4.9   0.0     0.027        33      70      90 ..      82     102 ..      77     106 .. 0.82
   3 ?   -1.4   0.0       2.5     3e+03      32      73 ..     144     184 ..     119     194 .. 0.58
   4 ?    2.7   0.0      0.14   1.6e+02      33      89 ..     248     309 ..     229     314 .. 0.76
   5 !   19.1   0.1     1e-06    0.0012       4      57 ..     376     427 ..     373     462 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00026
                   EE--SSSHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-SS-HHH CS
  Thioredoxin_8  7 yfgaswcppckaftpklkelyeklkkkkkveivyvsldkkeee 49
                    f+a wc +c a  p+     e+l+ k+++ +v v + ++ + 
     EPX72764.1 45 KFYAPWCGHCNALAPEYELAAEELE-KDNISMVEVDCTEETDL 86
                   79**********************8.7********99887655 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.027
                    -HHHHTT-S--TT-SEEEEE- CS
  Thioredoxin_8  70 krnklkkkynvkaiPtlvvld 90 
                    +   l+++yn+ ++Ptl v +
     EPX72764.1  82 EETDLCNEYNIRGYPTLTVFK 102
                    46789************9986 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 2.5
                    H.TTSEEEEEEE-SS-HHHHHHHGGGS-TTSEE.EE-TT-HHH CS
  Thioredoxin_8  32 k.kkkveivyvsldkkeeefekylkknkkpwlsvpfddkkrnk 73 
                    + + ++ +v    d+k++++   +++  k+  +++f + + + 
     EPX72764.1 144 EsSEDLAVVGFFDDEKLNATYTDVAESLKD--AFAFASSSDKD 184
                    334567777777777777777777777333..33344444444 PP

  == domain 4  score: 2.7 bits;  conditional E-value: 0.14
                    TTSEEEEEEE-SS-HHHHHHHGGGS...-TTSEE.EE-TT-HH.HHTT-S--TT.-SEEEEE CS
  Thioredoxin_8  33 kkkveivyvsldkkeeefekylkkn...kkpwlsvpfddkkrn.klkkkynvka.iPtlvvl 89 
                    +  + i++ ++ ++++e  ++++      ++ ++++f d  r+ +++k++nv++ +P +v+ 
     EPX72764.1 248 GLPLGIIFYNSTESRDELYNVFQPLakqYQDTVRFAFLDALRYgAVAKQMNVESnWPAFVIT 309
                    5667789999999999999999877433459999999999866699*****98769999985 PP

  == domain 5  score: 19.1 bits;  conditional E-value: 1e-06
                    EEEEE--SSSHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-SS-HHHHHHHGGGS CS
  Thioredoxin_8   4 vlLyfgaswcppckaftpklkelyeklkkkkkveivyvsldkkeeefekylkkn 57 
                    vl+ f+a wc +ck+  p+   l ek+   ++ ++v  ++d +e++    ++  
     EPX72764.1 376 VLVEFYAPWCGHCKNLAPTYESLAEKYA--DNKNVVVAKVDATENDLDVSISGF 427
                    8999***********************9..777777777777777766666555 PP

>> Calsequestrin  Calsequestrin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.8   0.2   6.4e-11   7.7e-08      83     214 ..      62     191 ..      59     208 .. 0.91
   2 !    6.8   0.0    0.0025         3     173     255 ..     253     342 ..     245     361 .. 0.78

  Alignments for each domain:
  == domain 1  score: 31.8 bits;  conditional E-value: 6.4e-11
                    HHHHHHCCCCTEEEEEEETTTTHHHHHCCT--STTEEEEEE.TTCEEEE-S--SHHHHHHHHHCCCS-SEEEE-SHHHHHHHHH--SS-EEEEE-S CS
  Calsequestrin  83 elvaqvledkdvgfvlvdakkeaklakklgldevdslyvlk.gdevieydgefaadvlveflldlledpveliesklelqaferiedeikligyfk 177
                    el+a+ le+ ++ +v vd+  e+ l++   +    +l v+k gd   +y g    d+lv+++   l+ pv    sk ++++f +  +++ ++g+f 
     EPX72764.1  62 ELAAEELEKDNISMVEVDCTEETDLCNEYNIRGYPTLTVFKnGDVSSQYSGPRRHDALVKYMKKQLQ-PVVQSVSKDNIDTFTESSEDLAVVGFFD 156
                    99**************************************9688899***************99997.555566899******************7 PP

                    -TTSHHHHHHHHHHHCCTTTSEEEEE--HHHHHHCT- CS
  Calsequestrin 178 skeseyykafeeaaeefqpyikffatfdkkvakklsl 214
                     ++     ++ + ae ++    f ++ dk+ ak l +
     EPX72764.1 157 DEK--LNATYTDVAESLKDAFAFASSSDKDFAKSLGV 191
                    654..567899**********************9976 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0025
                    EEE-S-TTS..HHHHHHHHHHHCCTTTSEEE...EE--HHHHHHCT--TTEEEEE-TT-SS-EE-..SSSS--HHHHHHHHHHCSS-SEE CS
  Calsequestrin 173 igyfkskes..eyykafeeaaeefqpyikff...atfdkkvakklslklnevdfyeafmeepvai..pdkpyseeelvefvkehrrstlr 255
                    i +++s es  e y+ f+  a+++q  ++f    a     vak++++  n   f  + +++ +    p+   + +++ +fvke+    l+
     EPX72764.1 253 IIFYNSTESrdELYNVFQPLAKQYQDTVRFAfldALRYGAVAKQMNVESNWPAFVITHLDKFLKFpyPNSDLTSKNMAKFVKEYTDGKLQ 342
                    5578888775589*************99863122333457***********9999999999887611567788999*******9877664 PP

>> Thioredoxin_2  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0   4.3e-07   0.00052       9      98 ..      43     112 ..      39     123 .. 0.83
   2 ?   -1.7   0.0       3.4   4.1e+03      48      48 ..     205     205 ..     125     266 .. 0.60
   3 !   12.9   0.1   9.3e-05      0.11       5      98 ..     373     446 ..     369     457 .. 0.75

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 4.3e-07
  Thioredoxin_2   9 lvvftdpdCpyCkklkkelkelddvtvrvllfplkpsfepkavaiwcakekkkafkdieenvelarkygvrgtPt.ivfldgkeivarlpG 98 
                    ++ f++p+C+ C +l  e +      +      l+++ ++ +v+++c++e             l ++y++rg Pt +vf +g+ +  ++ G
     EPX72764.1  43 MTKFYAPWCGHCNALAPEYELA---AEE-----LEKD-NISMVEVDCTEETD-----------LCNEYNIRGYPTlTVFKNGD-VSSQYSG 112
                    6779*************99999...444.....5555.7***********95...........************888***99.7667776 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 3.4
  Thioredoxin_2  48 p 48 
                    +
     EPX72764.1 205 Q 205
                    0 PP

  == domain 3  score: 12.9 bits;  conditional E-value: 9.3e-05
  Thioredoxin_2   5 gkpvlvvftdpdCpyCkklkkelkelddvtvrvllfplkpsfepkavaiwcakekkkafkdieenvelarkygvrgtPtivfldgk..eivarlpG 98 
                     k vlv f++p+C+ Ck l  + ++l    ++     + ++ + ++++++ +++                 + ++g+Pti ++ ++  e  + ++G
     EPX72764.1 373 TKDVLVEFYAPWCGHCKNLAPTYESL---AEK-----YADNKNVVVAKVDATEND--------------LDVSISGFPTIMLFKANdkENPLFYEG 446
                    699******************99999...444.....566667777777777777..............368899999988888876655555555 PP

>> Thioredoxin_7  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.0   0.00022      0.27      21      81 ..      43     101 ..      28     103 .. 0.75
   2 !   22.6   0.0   7.7e-08   9.2e-05      13      82 ..     369     434 ..     362     435 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00022
                    EEEE--TT-HHHHHHHHHHHH-.HHHHH.HHHT-EEEEESS--S-GGG.-TT-.--SSEEEEE CS
  Thioredoxin_7  21 lvffgaswcftCqalerdflsd.eevkaalaekfvllrvdvterdanilelde.qgvPvvafl 81 
                    +  f a wc++C al+ + + + ee+    ++++ ++ vd te+ +   + ++ +g+P++ ++
     EPX72764.1  43 MTKFYAPWCGHCNALAPEYELAaEELE---KDNISMVEVDCTEETDLC-NEYNiRGYPTLTVF 101
                    55799**********888665515554...5**********9999855.44446899999887 PP

  == domain 2  score: 22.6 bits;  conditional E-value: 7.7e-08
                    HHHHT--EEEEE--TT-HHHHHHHHHHHH-HHHHH.HHHT-EEEEESS--S-GGG.-TT---SSEEEEE- CS
  Thioredoxin_7  13 aaergkpvlvffgaswcftCqalerdflsdeevkaalaekfvllrvdvterdanileldeqgvPvvafld 82 
                       + k+vlv f a wc++C+ l+ + +s  e  a  ++++v+ +vd te+d  +     +g+P++++++
     EPX72764.1 369 VLDSTKDVLVEFYAPWCGHCKNLAPTYESLAEKYA-DNKNVVVAKVDATENDLDV---SISGFPTIMLFK 434
                    56789*******************99999855544.46**************866...3579***99986 PP

>> AhpC-TSA  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.1   4.3e-05     0.052      26      73 ..      40      86 ..      21     113 .. 0.81
   2 ?    0.3   0.0      0.52   6.2e+02      59     103 ..     148     194 ..     118     213 .. 0.75
   3 !   16.4   0.0   5.5e-06    0.0066      14      68 ..     364     414 ..     348     427 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 4.3e-05
                SEEEEEEESTST-CCHHHHHHHHHHCHHHCCCTTEEEEEEESSSCHHH CS
    AhpC-TSA 26 kpvvlffypkdwcpvCttelpalaklyeefkergvevigvsvdspesh 73
                +  +  fy+  wc +C++ +p+++ ++ee+++ ++ ++ v ++++ ++
  EPX72764.1 40 NLFMTKFYAP-WCGHCNALAPEYELAAEELEKDNISMVEVDCTEETDL 86
                5667789999.**************************99999877654 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.52
                 TEEEEEEESSSCH..HHHHHHHH-H.SSEEEE-TTSHHHHHTT-EET CS
    AhpC-TSA  59 gvevigvsvdspe..shkkfiekeslnfpllsDeegkvakaygvlke 103
                 ++ v+g  +d++   +  + +e  +  f  +s +++++ak++gv+++
  EPX72764.1 148 DLAVVGFFDDEKLnaTYTDVAESLKDAFAFASSSDKDFAKSLGVPFP 194
                 55566666655544566667777778999999999999999999876 PP

  == domain 3  score: 16.4 bits;  conditional E-value: 5.5e-06
                 TCEEEECHHHTTSEEEEEEESTST-CCHHHHHHHHHHCHHHCCCTTEEEEEEESS CS
    AhpC-TSA  14 dgetvslsdykgkpvvlffypkdwcpvCttelpalaklyeefkergvevigvsvd 68 
                 + ++v l+  k+  v++ fy+  wc +C++ +p ++ l+e+++++  +v+   vd
  EPX72764.1 364 NYNQVVLDSTKD--VLVEFYAP-WCGHCKNLAPTYESLAEKYADN-KNVVVAKVD 414
                 457788888877..9*******.*******************943.334433333 PP

>> Redoxin  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0      0.02        24      35      66 ..      46      76 ..      27      89 .. 0.80
   2 !    5.6   0.1    0.0099        12      75     105 ..     161     193 ..     131     210 .. 0.80
   3 !   14.5   0.0   1.9e-05     0.022      16      67 ..     363     411 ..     345     450 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.02
                EESTTT-HHHHHTHHHHHTHHHHHHCSTTTEE CS
     Redoxin 35 fvpgafcPtCsaehpyleklaellkekgvdvv 66
                f++  +c+ C+a +p+ e  ae+l++ ++++v
  EPX72764.1 46 FYAP-WCGHCNALAPEYELAAEELEKDNISMV 76
                5666.**********88888888899999887 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.0099
                 H..HHHHHHHTT-TSEEEE-TTSHHHHHTT-TT CS
     Redoxin  75 f..vkefwgkeglkfpvlsDgsaaftkalGlrl 105
                     ++++++++  f ++s+ +++f+k+lG+++
  EPX72764.1 161 NatYTDVAESLKDAFAFASSSDKDFAKSLGVPF 193
                 14467777889999****************884 PP

  == domain 3  score: 14.5 bits;  conditional E-value: 1.9e-05
                 TCEEEEEHHHHTTSEEEEEEESTTT-HHHHHTHHHHHTHHHHHHCSTTTEEE CS
     Redoxin  16 tdgnsvslsefkgkkvvvnfvpgafcPtCsaehpyleklaellkekgvdvva 67 
                 ++ n+v l++   k v+v f++  +c+ C++ +p  e lae+++++ + vva
  EPX72764.1 363 DNYNQVVLDS--TKDVLVEFYAP-WCGHCKNLAPTYESLAEKYADNKNVVVA 411
                 5556666666..6999*******.**********999999999999888887 PP

>> Thioredoxin_5  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0   0.00031      0.38     115     166 ..      53     103 ..      32     115 .. 0.84
   2 ?   -1.8   0.0       1.8   2.1e+03     149     165 ..     293     310 ..     283     314 .. 0.83
   3 ?   -1.1   0.0       1.1   1.3e+03       3      27 ..     380     404 ..     379     417 .. 0.85
   4 ?    2.0   0.0      0.12   1.5e+02     152     177 ..     421     446 ..     409     454 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00031
  Thioredoxin_5 115 llleiaekaglDveefkeDlesklakkafqcDlklakemgvtevPtlvffne 166
                    +  ++a + +l  ee+++D  s  ++    +   l +e++++  Ptl +f +
     EPX72764.1  53 HCNALAPEYELAAEELEKDNISM-VEVDCTEETDLCNEYNIRGYPTLTVFKN 103
                    5677899999*********9998.7777789999**************9984 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 1.8
  Thioredoxin_5 149 lakemgvte.vPtlvffn 165
                    +ak+m+v++  P++v+ +
     EPX72764.1 293 VAKQMNVESnWPAFVITH 310
                    899****85269999976 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 1.1
  Thioredoxin_5   3 FidPlcseCweiEpelkklkveyge 27 
                    F  P+c +C ++ p    l ++y +
     EPX72764.1 380 FYAPWCGHCKNLAPTYESLAEKYAD 404
                    778********99999999888865 PP

  == domain 4  score: 2.0 bits;  conditional E-value: 0.12
  Thioredoxin_5 152 emgvtevPtlvffneneeeeglkveg 177
                    ++ ++ +Pt+++f +n++e+ l  eg
     EPX72764.1 421 DVSISGFPTIMLFKANDKENPLFYEG 446
                    456899********999998776665 PP

>> DSBA  DSBA-like thioredoxin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0     0.007       8.3     148     191 ..      75     122 ..      53     124 .. 0.79
   2 ?    4.1   0.0     0.029        35       2      34 ..     377     410 ..     376     440 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.007
                 HHHHHHHHHHHHHHHTT-SSSSEEEE..TTC..EEEESSSSHHHHHHH CS
        DSBA 148 avkeavrentaaaqslgvtGvPtvvv..dgk..rmvfGadrldtlada 191
                  v+ +  e+t++ ++++++G Pt  v  +g    + +G  r d l ++
  EPX72764.1  75 MVEVDCTEETDLCNEYNIRGYPTLTVfkNGDvsSQYSGPRRHDALVKY 122
                 56778899******************9866556788898888888776 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.029
                 EEEEEBTTBHHHHHHHHHHHHHHHHC.CTEEEEE CS
        DSBA   2 vdeffDvlCPyCylgkerleklaars.pdvkvvl 34 
                 ++ef+   C++C+  ++ +e+la+++ ++ +vv 
  EPX72764.1 377 LVEFYAPWCGHCKNLAPTYESLAEKYaDNKNVVV 410
                 67899999******************63344443 PP

>> TraF  F plasmid transfer operon protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0     0.039        47     128     196 ..      38      98 ..      28     109 .. 0.74
   2 ?   -1.9   0.0         2   2.4e+03      34      70 ..     108     144 ..      99     148 .. 0.80
   3 ?   11.0   0.0   0.00023      0.28     121     159 ..     367     403 ..     328     444 .. 0.66

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.039
        TraF 128 akeygLlfFyrgkcpyceaqapilqafadky...glevraVsvdgrplpelpnarvdkgqaarlgvkrtPal 196
                 a++ ++  Fy++ c+ c a+ap ++  a++    +++++ V++ ++ +  l n         +++++  P+l
  EPX72764.1  38 ADNLFMTKFYAPWCGHCNALAPEYELAAEELekdNISMVEVDCTEETD--LCN---------EYNIRGYPTL 98 
                 56777888**************99988876543367777777766655..666.........5555555555 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 2
        TraF  34 seesatesaaelrkeleelldkAilnPteenveaylr 70 
                 s+ s + + ++l k+++++l+  ++  +++n+ ++ +
  EPX72764.1 108 SQYSGPRRHDALVKYMKKQLQPVVQSVSKDNIDTFTE 144
                 5666778889999999999999999999999988865 PP

  == domain 3  score: 11.0 bits;  conditional E-value: 0.00023
        TraF 121 eaalkklakeygLlfFyrgkcpyceaqapilqafadkyg 159
                 + +l + +    L+ Fy++ c+ c+ +ap+++++a+ky 
  EPX72764.1 367 QVVLDSTK--DVLVEFYAPWCGHCKNLAPTYESLAEKYA 403
                 55555444..36899***********************5 PP

>> HyaE  Hydrogenase-1 expression protein HyaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.0   0.00098       1.2      63      98 ..      73     109 ..      61     117 .. 0.79
   2 ?   -2.8   0.0         5     6e+03      12      31 ..     132     151 ..     124     169 .. 0.65
   3 ?   -1.9   0.0       2.8   3.3e+03      53      94 ..     272     313 ..     263     316 .. 0.67
   4 ?   -2.1   0.0       3.1   3.7e+03      14      35 ..     413     436 ..     398     440 .. 0.47

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00098
                 EEEEE.THHHHHHHHHCCT-TSSSEEEEEETTEEEEE CS
        HyaE  63 aavva.dreqeealaerfgvlktPsllflrdgeylgv 98 
                 + +v  d  +e+ l ++++++ +P+l ++++g++ + 
  EPX72764.1  73 ISMVEvDCTEETDLCNEYNIRGYPTLTVFKNGDVSSQ 109
                 4445448899*********************998765 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 5
                 EEE-CCCHHHHHHHHSEEEE CS
        HyaE  12 aevdadtlddflkaagdavl 31 
                 + v++d++d f++ + d  +
  EPX72764.1 132 QSVSKDNIDTFTESSEDLAV 151
                 67888899999888665443 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 2.8
                 HHCT-TTS-EEEEEETHHHHHHHHHCCT-.TSSSEEEEEETTE CS
        HyaE  53 llkaFpnalraavvadreqeealaerfgv.lktPsllflrdge 94 
                 l k+++++ r a +    +  a+a++++v + +P++++   ++
  EPX72764.1 272 LAKQYQDTVRFAFLD-ALRYGAVAKQMNVeSNWPAFVITHLDK 313
                 667777777766665.666667777777734688888766555 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 3.1
                 E-..CCCHHHHHHHHSEEEEEESS CS
        HyaE  14 vd..adtlddflkaagdavlllag 35 
                 vd  +++ld  ++  ++ +l+ a 
  EPX72764.1 413 VDatENDLDVSISGFPTIMLFKAN 436
                 332233444444444444444444 PP

>> Thioredoxin_4  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.1      0.84     1e+03      16      50 ..      42      75 ..      37      88 .. 0.74
   2 ?   -1.6   0.0       2.3   2.7e+03     130     162 ..      84     121 ..      62     125 .. 0.70
   3 ?   -2.7   0.0       4.7   5.6e+03      33      59 ..     327     352 ..     324     362 .. 0.74
   4 ?   11.7   1.1   0.00018      0.22      13      55 ..     373     415 ..     371     497 .. 0.66

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.84
                   EEEEEE-TT-HHHHHHHHHHHHHHHHHHHTTSEEE CS
  Thioredoxin_4 16 tvieyedlrCphCakfeeeveklleeyidtGkvkf 50
                   +++ +    C hC +++ e+e l +e ++++++++
     EPX72764.1 42 FMTKFYAPWCGHCNALAPEYE-LAAEELEKDNISM 75
                   577888999*****9999875.4444456776665 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 2.3
                    HHHHHHHT--SS-EEEE..TTEE...E-TT--HHHHHH CS
  Thioredoxin_4 130 skeakkagiestPtfii..ngek...veepqtyeelka 162
                        ++ +i + Pt+ +  ng +   +++p + ++l +
     EPX72764.1  84 TDLCNEYNIRGYPTLTVfkNGDVssqYSGPRRHDALVK 121
                    44448999999999999888887344455555555555 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 4.7
                    HHHHHHHHHHHHTTSEEEEEEE-..-- CS
  Thioredoxin_4  33 eeveklleeyidtGkvkfiirdfpldk 59 
                    +++ k+++ey  +Gk++  i+  p ++
     EPX72764.1 327 KNMAKFVKEY-TDGKLQPKIKSQPVPE 352
                    5677888888.7888887777776665 PP

  == domain 4  score: 11.7 bits;  conditional E-value: 0.00018
                    -SEEEEEEE-TT-HHHHHHHHHHHHHHHHHHHTTSEEEEEEE- CS
  Thioredoxin_4  13 ApvtvieyedlrCphCakfeeeveklleeyidtGkvkfiirdf 55 
                     + +++e+    C hC++++ ++e l e+y d+ +v +   d 
     EPX72764.1 373 TKDVLVEFYAPWCGHCKNLAPTYESLAEKYADNKNVVVAKVDA 415
                    6889**************************8888776555554 PP

>> Glutaredoxin  Glutaredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.5     0.021        25       4      41 ..      42      90 ..      41     106 .. 0.63
   2 ?    2.4   0.4      0.15   1.8e+02       6      15 ..     382     391 ..     372     422 .. 0.76

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.021
                  EES....TSSHHHHH.......HHHHHHHTTGGEEEEEGCCSHHHHHHH CS
  Glutaredoxin  4 ftk....ptCpyCkk.......akrlLkelgvkfeeidvdkdeeireel 41
                  f++    p+C++C++       a + L++ +++  e+d +++ ++  e 
    EPX72764.1 42 FMTkfyaPWCGHCNAlapeyelAAEELEKDNISMVEVDCTEETDLCNEY 90
                  6666888******984444444455567777777777777765555554 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.15
                   STSSHHHHHH CS
  Glutaredoxin   6 kptCpyCkka 15 
                    p+C++Ck+ 
    EPX72764.1 382 APWCGHCKNL 391
                   49*****985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (498 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1530  (0.0853366); expected 358.6 (0.02)
Passed bias filter:                      771  (0.043003); expected 358.6 (0.02)
Passed Vit filter:                        75  (0.00418317); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.70u 0.29s 00:00:00.99 Elapsed: 00:00:00.47
# Mc/sec: 3173.76
//
Query:       EPX72765.1  [L=1297]
Description: GTPase activating protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.3e-67  226.8  19.6    5.3e-67  226.8  19.6    1.8  2  DUF3384   Domain of unknown function (DUF3384)
  ------ inclusion threshold ------
        1.8    8.8   6.7        1.6    8.9   2.9    2.9  2  CNOT11    CCR4-NOT transcription complex subunit 11


Domain annotation for each model (and alignments):
>> DUF3384  Domain of unknown function (DUF3384)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  226.8  19.6   5.9e-71   5.3e-67       3     475 ..      25     474 ..      23     479 .. 0.94
   2 ?   -1.7   0.1      0.12     1e+03      56      99 ..     810     849 ..     774     883 .. 0.72

  Alignments for each domain:
  == domain 1  score: 226.8 bits;  conditional E-value: 5.9e-71
                 HHHHHHHHHHHHHHH-TTS--HHHHHHHHHHHSTTS-HHHHHHHHHHHHHHC.T-TT--HHHHHHHHHHHHS.....S--GGGHHHHHHHHHHHCTTTT CS
     DUF3384   3 qRikaaraLaaaverysldsvaevWrlakdLltaeqpqelRiaglnLltacvkkdqelsaieRalfFrlilsrkndesseiddlplqLeaLevLTkdGr 101
                 +R k +++L +  + ++  +++++ ++++d l+ +  +el+  +++ +++  + + + s+ eR l+F+ i++ +n e     d+p+ LeaL++ T++G 
  EPX72765.1  25 KRYKRIKRLIYDEQFCKHVPIEKLVNCTSDTLELKAGDELKNLAIHIWIRATEYQRDISNRERELLFHKISKLSNVE-----DYPKGLEALITTTSQGE 118
                 68889999999555555555********************************999*****************55555.....5**************** PP

                 --TT-TTTHHHHHHHHHHHHHHHH..H---------------HHHHHHHHHHHHHHHHHHHHGGGS-HHHHHHHHHHHHHHHCS-S-HHHHHHHHHHHH CS
     DUF3384 102 diegfeyeilplLtrwldealaskdnadeaakqqtkaisqlsseernlqqllqlltdilkfnfarldeseveslirsaleicigtsnaddlrsclklld 200
                 +ie+ +++il+lL++w+++++++ d+ +++++++ + ++ql+s +++++q++ llt++++ +f+++de +++s++ ++++ic++t++ +d++ +++ll+
  EPX72765.1 119 KIESYSNDILKLLSEWITTIFERLDALRSNNRNSFRTSHQLKSFTHCFHQTMILLTNMIRVKFHVFDEMAISSMLANCIWICKNTTDVQDIELVFSLLN 217
                 *********************8899************************************************************************** PP

                 HHHHHS---HHHHHHHHHHHHHH.HHH-GG....GHHHHHHHHHHHHCSTCHHHHHHHHHHHHHT---SHHHHHHHHHHHHHHHHHHHHHTT--TT--. CS
     DUF3384 201 aiiryghlPsasldvvikvLCsi.ycridsndddlqkevwrilsnllkshvgnaairslldiLtdpseakaaqkedpavlrGAvevlrllllsskgqpe 298
                 ++i+ g++ s+ l +vi++LC++ + +        ++++++i+++llks  ++++++sl+++L++pse      ++     GAv+vl  +++      +
  EPX72765.1 218 SLISRGSVSSSVLFSVIEMLCRAkFGLAA-----SSESAQQIIDKLLKSTKKYETVSSLRKVLESPSE------TSLIAQMGAVRVLCNIII------D 299
                 ***********************555544.....6*******************************99......7777777***********......5 PP

                 .....---HHHHHHHHHHHHCS--HHHHHHHHHHHHHHH--------GGGTTS--HHHHHHHHHCCTTTEE------------G..E-HHHHHHHHHHH CS
     DUF3384 299 dalapslslalllpalraalkrqsdvldlevlqlisdlLpsasvsrdkllaesdWdalldlliecsrrledlkeedkassssee..eksslaaelssll 395
                     + ++  +ll+ + +al+++s++l+le+ +++++ L+++s  + +ll  ++W +lld++i++s+ l ++++++k++++++e    +s++++  + +
  EPX72765.1 300 PPRFVYCTRGMLLEFMLQALNQRSSRLALEMSRSLYNALEHRS--FVELLYIDEWISLLDIFIKISSALPKSSNYKKETWKHSEpnILESVKTYQIRNI 396
                 56788************************************99..**************************************9988999999999*** PP

                 HHHHHHHHHGGGSTTHHHHHHHHHHHH-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
     DUF3384 396 sslesllesgedsgqkekliafflevssalpdstaeavLkyldkerlcspsnedWlenlkklldsFfknrkrssevRlla 475
                   le ++++ +  +  +k++++++ +s +l+++ ++++L +l +er   p  + W  + k+l+d +++ +  s e+Rl  
  EPX72765.1 397 YLLEDFFQEFTSIVLLDKFFDLLKVNSFYLSNDLCKKMLLVL-DERAQMPHLSSWFSDQKLLVDIYMNFNI-SFEMRLSL 474
                 ******************************************.699******************8888765.88888876 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.12
                 T-TT--HHHHHHHHHHHHS.....S.--GGGHHHHHHHHHHHCTT CS
     DUF3384  56 kdqelsaieRalfFrlilsrkndes.seiddlplqLeaLevLTkd 99 
                 +  + s+  + +fF+li+s +n ++ s    l  +L++L v +++
  EPX72765.1 810 AMHSFSVSYMPKFFSLIMS-SNISErS----LVNFLRLLHVVSNN 849
                 5556666777789999999.3333324....99999999998886 PP

>> CNOT11  CCR4-NOT transcription complex subunit 11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   2.9   0.00017       1.6      28     108 ..     156     238 ..     124     245 .. 0.72
   2 ?   -1.7   0.1      0.35   3.2e+03      77      93 ..     859     875 ..     801     886 .. 0.62

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00017
      CNOT11  28 lvkldvtlhslevvnrltse......aelpkefvhkyisnciksceeakdkeaqerlvrlvcvflqsLirnkivdvkdllvevqaFC 108
                   +l++ +h ++    l+++          +  + + ++nci  c++++d +     + lv  +l+sLi ++ v+ + l+  ++++C
  EPX72765.1 156 SHQLKSFTHCFHQTMILLTNmirvkfHVFDEMAISSMLANCIWICKNTTDVQ----DIELVFSLLNSLISRGSVSSSVLFSVIEMLC 238
                 44444444444444443332233332333455899************99664....79****************************9 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.35
      CNOT11  77 rlvrlvcvflqsLirnk 93 
                  +++ +c+f  s+ir++
  EPX72765.1 859 ETIQKICLFCLSIIRSR 875
                 34555666666666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1297 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       738  (0.0411624); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.83u 0.28s 00:00:01.10 Elapsed: 00:00:00.47
# Mc/sec: 8234.76
//
Query:       EPX72766.1  [L=601]
Description: transcriptional corepressor Tup11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.6e-57  190.1  16.2    1.4e-08   35.3   0.9    7.4  7  WD40           WD domain, G-beta repeat
    3.3e-21   75.4   0.0    6.9e-05   23.1   0.0    6.0  6  ANAPC4_WD40    Anaphase-promoting complex subunit 4 WD40 doma
    1.4e-18   67.0   5.1    2.4e-18   66.2   5.1    1.4  1  Tup_N          Tup N-terminal
    1.1e-12   47.9   0.0     0.0016   17.9   0.0    4.2  4  WD40_like      WD40-like domain
    5.4e-08   31.9   0.4       0.17   10.5   0.0    4.9  5  Nup160         Nucleoporin Nup120/160
    3.2e-07   30.4   0.0    8.7e-05   22.5   0.0    3.3  4  eIF2A          Eukaryotic translation initiation factor eIF2A
    2.3e-06   27.4   0.3        1.1    9.3   0.0    5.5  6  PD40           WD40-like Beta Propeller Repeat
    2.6e-05   23.4   0.1        7.1    5.5   0.0    4.9  5  Ge1_WD40       WD40 region of Ge1, enhancer of mRNA-decapping
    0.00011   21.1   1.7       0.61    8.8   0.0    4.4  3  Nucleoporin_N  Nup133 N terminal like
     0.0025   16.4   0.1       0.31    9.5   0.0    2.7  2  Cytochrom_D1   Cytochrome D1 heme domain
  ------ inclusion threshold ------
      0.011   15.6   2.8      0.018   14.9   2.8    1.3  1  Dynactin_p22   Dynactin subunit p22
      0.017   14.2   3.2      0.027   13.6   3.2    1.2  1  APG17          Autophagy protein Apg17
      0.041   13.5   1.4      0.082   12.5   1.4    1.5  1  PI3K_P85_iSH2  Phosphatidylinositol 3-kinase regulatory subun
       0.05   13.3   6.0      0.082   12.6   6.0    1.2  1  SHE3           SWI5-dependent HO expression protein 3
      0.081   13.1   1.0       0.16   12.2   1.0    1.4  1  FliJ           Flagellar FliJ protein
       0.13   12.4   5.2       0.24   11.5   5.2    1.3  1  UPF0242        Uncharacterised protein family (UPF0242) N-ter
       0.13   10.9   0.0       0.31    9.7   0.0    1.6  1  Vps16_N        Vps16, N-terminal region
       0.24   10.8   3.3       0.39   10.1   3.3    1.2  1  Golgin_A5      Golgin subfamily A member 5
       0.27   11.0   3.8       0.45   10.3   3.8    1.3  1  TACC_C         Transforming acidic coiled-coil-containing pro


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.1   3.5e-05     0.033       2      37 ..     292     326 ..     291     327 .. 0.78
   2 !   27.7   0.0   3.6e-09   3.4e-06      12      38 .]     346     375 ..     331     375 .. 0.82
   3 !   35.0   0.2   1.8e-11   1.7e-08       7      38 .]     385     417 ..     378     417 .. 0.90
   4 !   22.5   0.0   1.6e-07   0.00015       2      38 .]     422     458 ..     421     458 .. 0.88
   5 !   35.1   0.0   1.7e-11   1.6e-08       4      37 ..     464     498 ..     461     499 .. 0.90
   6 !   35.3   0.9   1.4e-11   1.4e-08       2      38 .]     516     553 ..     515     553 .. 0.92
   7 !   24.7   0.2   3.2e-08     3e-05       5      38 .]     561     595 ..     557     595 .. 0.89

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 3.5e-05
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 ++++tl+ H s v++ +fs++g++la+G+ ++   i+
  EPX72766.1 292 NLVHTLE-HpSVVCCTKFSHNGKFLATGC-NRATNIF 326
                 5789995.944479999***********9.7766665 PP

  == domain 2  score: 27.7 bits;  conditional E-value: 3.6e-09
                 S...EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  12 s...vtslafspdgawlasGsdDgtvriWd 38 
                     v+ +afspdg++l++G++D+ +++Wd
  EPX72766.1 346 RdlyVRTIAFSPDGKYLVTGTEDRQIKLWD 375
                 1566999**********************9 PP

  == domain 3  score: 35.0 bits;  conditional E-value: 1.8e-11
                 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++GH ++++sl+fs++g++++sGs D+t r+Wd
  EPX72766.1 385 FSGHeQDIYSLDFSHNGRFIVSGSGDHTARLWD 417
                 79**999****************99*******9 PP

  == domain 4  score: 22.5 bits;  conditional E-value: 1.6e-07
                 EEEEEEESSSSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGHssvtslafspdgawlasGsdDgtvriWd 38 
                 qc+ +l+  ++vt++a sp+ +++a Gs D+ +r+W+
  EPX72766.1 422 QCILKLEIENGVTAIAISPNDQYIAVGSLDQIIRVWS 458
                 77777776678*************************5 PP

  == domain 5  score: 35.1 bits;  conditional E-value: 1.7e-11
                 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 +  l+GH  sv+s+afspd++ l+sGs D+t+++W
  EPX72766.1 464 VERLEGHkESVYSIAFSPDSKILVSGSLDKTIKVW 498
                 55689**878************************* PP

  == domain 6  score: 35.3 bits;  conditional E-value: 1.4e-11
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  c  t+ GH ++v s+a+spd++w +sGs+D+++ +Wd
  EPX72766.1 516 VCKATYHGHsDFVLSVAVSPDNRWALSGSKDRSIQFWD 553
                 6899*****555************99***********9 PP

  == domain 7  score: 24.7 bits;  conditional E-value: 3.2e-08
                 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  t+ GH +sv s++fspdg+ +asGs D   riW+
  EPX72766.1 561 LTCQGHkNSVISVSFSPDGKQFASGSGDLRARIWS 595
                 6789**99999**************99*******5 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0   0.00064       0.6      25      79 ..     290     340 ..     283     344 .. 0.79
   2 !   23.1   0.0   7.3e-08   6.9e-05      26      80 ..     331     389 ..     329     392 .. 0.89
   3 !   20.2   0.0   5.9e-07   0.00056      36      87 ..     387     436 ..     379     441 .. 0.89
   4 !   13.0   0.0    0.0001     0.097       4      68 ..     439     501 ..     436     524 .. 0.74
   5 ?    2.9   0.0      0.14   1.4e+02      37      88 ..     524     574 ..     515     576 .. 0.83
   6 ?    6.1   0.0     0.014        14      34      67 ..     563     596 ..     542     600 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00064
  ANAPC4_WD40  25 ngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvk 79 
                  n + v tl   ++ s v + +++++gk+La +++  + +++d+++g+ + +l+ +
   EPX72766.1 290 NINLVHTL---EHPSVVCCTKFSHNGKFLATGCNR-ATNIFDVHTGQKLFTLNED 340
                  55666666...788889999*************76.579*******999887655 PP

  == domain 2  score: 23.1 bits;  conditional E-value: 7.3e-08
  ANAPC4_WD40  26 gqrvwtl....eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvks 80 
                  gq+++tl    +++++d  vr +a++pdgk L+ +++d +++l d  ++kv   +s ++
   EPX72766.1 331 GQKLFTLnedsPDQSRDLYVRTIAFSPDGKYLVTGTEDRQIKLWDLATQKVRFLFSGHE 389
                  7999999888888899999*******************************998877665 PP

  == domain 3  score: 20.2 bits;  conditional E-value: 5.9e-07
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtcl 87 
                  ++++ + sL ++++g++++ +  d + rl d+e+g+++ +l++++   vt +
   EPX72766.1 387 GHEQDIYSLDFSHNGRFIVSGSGDHTARLWDVETGQCILKLEIENG--VTAI 436
                  578899***********************************99988..6655 PP

  == domain 4  score: 13.0 bits;  conditional E-value: 0.0001
  ANAPC4_WD40   4 cptmDLiAlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldae 68 
                  +p+   iA+++ d+ ++v  ++g  v  l  ++++++v s+a++pd k+L+ +  d ++++ + +
   EPX72766.1 439 SPNDQYIAVGSLDQIIRVWSVSGTLVERL--EGHKESVYSIAFSPDSKILVSGSLDKTIKVWELQ 501
                  44444555555555555555555555555..899*************************998765 PP

  == domain 5  score: 2.9 bits;  conditional E-value: 0.14
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclg 88 
                  ++  v s+a +pd++    + +d ++++ d ++g+   +++ ++++ v +++
   EPX72766.1 524 HSDFVLSVAVSPDNRWALSGSKDRSIQFWDLQTGQSYLTCQGHKNS-VISVS 574
                  56668899999*************************9999999885.66665 PP

  == domain 6  score: 6.1 bits;  conditional E-value: 0.014
  ANAPC4_WD40  34 edkedsevrsLaWkpdgklLavaysdgevrllda 67 
                   ++++++v s++++pdgk +a +  d + r+ ++
   EPX72766.1 563 CQGHKNSVISVSFSPDGKQFASGSGDLRARIWSI 596
                  4688999******************999999876 PP

>> Tup_N  Tup N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.2   5.1   2.5e-21   2.4e-18       2      75 ..      10      84 ..       9      86 .. 0.97

  Alignments for each domain:
  == domain 1  score: 66.2 bits;  conditional E-value: 2.5e-21
       Tup_N  2 lnelLdavkqEfdalsqeasslkaqkdeyelk.iqsqiqElqqirqtlyeLeeahrkikqqYEeeiarLkaeLes 75
                ++e+Lda+k+E+d l+++ ss++++ d+ye++ i sqiq+++ +r+tl ++ e++++i+++YE+e++++k+eL++
  EPX72766.1 10 VQEVLDALKSEYDLLNKNSSSTESHADNYETSmILSQIQDIEDFRKTLDDMIEKQKAIRETYEKEVNAIKHELDA 84
                89*****************************99****************************************97 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0      0.11   1.1e+02       5      35 ..     352     382 ..     347     389 .. 0.86
   2 !   17.2   0.0   2.7e-06    0.0026       2      36 ..     391     425 ..     390     433 .. 0.91
   3 !   17.9   0.0   1.7e-06    0.0016       4      82 ..     434     512 ..     430     523 .. 0.88
   4 ?    5.4   0.0      0.01       9.9       3      50 ..     528     575 ..     526     586 .. 0.92

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.11
   WD40_like   5 sidiskkgslilyGgkddkctvlkleslesv 35 
                 +i +s++g++++ G +d ++++ +l ++++ 
  EPX72766.1 352 TIAFSPDGKYLVTGTEDRQIKLWDLATQKVR 382
                 7999*********************998765 PP

  == domain 2  score: 17.2 bits;  conditional E-value: 2.7e-06
   WD40_like   2 eiYsidiskkgslilyGgkddkctvlkleslesvs 36 
                 +iYs+d+s++g +i+ G+ d+++++ ++e+++ + 
  EPX72766.1 391 DIYSLDFSHNGRFIVSGSGDHTARLWDVETGQCIL 425
                 7*****************************99875 PP

  == domain 3  score: 17.9 bits;  conditional E-value: 1.7e-06
   WD40_like   4 YsidiskkgslilyGgkddkctvlkleslesvsivesfedSvifvklldddlilv.vtlDGtillslleneeevenekie 82 
                  +i is++ ++i++G+ d+ ++v ++ s+++v  +e+ ++Sv  + +  d +ilv ++lD ti    l+  ++v    i+
  EPX72766.1 434 TAIAISPNDQYIAVGSLDQIIRVWSV-SGTLVERLEGHKESVYSIAFSPDSKILVsGSLDKTIKVWELQFPQSVGLSAIK 512
                 5899*********************9.6899********************9999459*****99999988888766666 PP

  == domain 4  score: 5.4 bits;  conditional E-value: 0.01
   WD40_like   3 iYsidiskkgslilyGgkddkctvlkleslesvsivesfedSvifvkl 50 
                 + s+ +s+++   l G+kd  ++  +l++++s    ++ ++Svi v +
  EPX72766.1 528 VLSVAVSPDNRWALSGSKDRSIQFWDLQTGQSYLTCQGHKNSVISVSF 575
                 56899***************************************8877 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.1   0.0    0.0038       3.5     213     251 ..     340     380 ..     328     382 .. 0.82
   2 !   10.5   0.0   0.00018      0.17     230     258 ..     401     429 ..     392     435 .. 0.82
   3 ?    3.7   0.0     0.021        20     223     248 ..     436     460 ..     430     466 .. 0.82
   4 ?    0.9   0.0      0.15   1.4e+02     223     247 ..     477     500 ..     465     510 .. 0.82
   5 ?    3.7   0.0      0.02        19     221     257 ..     529     564 ..     515     582 .. 0.76

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0038
                 TT-ECEEEEET.......TTTEEEEEETT-EEEEEETTTTE CS
      Nup160 213 asvalsldvavavvei..gqtylfalsrdgkLrvWnlltgk 251
                  s+++s d++v+ +    + +yl++ + d+ +++W+l+t+k
  EPX72766.1 340 DSPDQSRDLYVRTIAFspDGKYLVTGTEDRQIKLWDLATQK 380
                 45567778888888778899*******************98 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00018
                 TTEEEEEETT-EEEEEETTTTEEEEEEE- CS
      Nup160 230 qtylfalsrdgkLrvWnlltgkclatidl 258
                   ++++ s d++ r+W+++tg+c+   ++
  EPX72766.1 401 GRFIVSGSGDHTARLWDVETGQCILKLEI 429
                 568888899**************987666 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.021
                 T.....TTTEEEEEETT-EEEEEETT CS
      Nup160 223 vavveigqtylfalsrdgkLrvWnll 248
                 +a++  +++y+++ s+d+ +rvW+++
  EPX72766.1 436 IAISP-NDQYIAVGSLDQIIRVWSVS 460
                 44444.99****************97 PP

  == domain 4  score: 0.9 bits;  conditional E-value: 0.15
                 T.....TTTEEEEEETT-EEEEEET CS
      Nup160 223 vavveigqtylfalsrdgkLrvWnl 247
                 +a++  ++++l++ s+d++++vW l
  EPX72766.1 477 IAFSP-DSKILVSGSLDKTIKVWEL 500
                 34444.999**************98 PP

  == domain 5  score: 3.7 bits;  conditional E-value: 0.02
                 EET.....TTTEEEEEETT-EEEEEETTTTEEEEEEE CS
      Nup160 221 vavavveigqtylfalsrdgkLrvWnlltgkclatid 257
                 ++vav+  ++  +++ s d+ ++ W+l+tg+   t++
  EPX72766.1 529 LSVAVSP-DNRWALSGSKDRSIQFWDLQTGQSYLTCQ 564
                 2333343.99999*****************9988865 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       1.6   1.5e+03     136     163 ..     292     320 ..     287     341 .. 0.60
   2 !   22.5   0.0   9.2e-08   8.7e-05      36     186 ..     329     467 ..     299     477 .. 0.77
   3 !    9.5   0.0   0.00085      0.81      51     165 ..     422     535 ..     418     541 .. 0.76
   4 ?    4.1   0.0      0.04        38     126     162 ..     548     586 ..     470     595 .. 0.69

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 1.6
                 EEEEEEE-TT--EE.EE-TTSSEEEEEE- CS
       eIF2A 136 kkiakaeaanatlv.ewspdgryvlTatt 163
                 + ++++e++  + + ++s +g++++T   
  EPX72766.1 292 NLVHTLEHPSVVCCtKFSHNGKFLATGCN 320
                 55667777766665468888888888543 PP

  == domain 2  score: 22.5 bits;  conditional E-value: 9.2e-08
                 EEEEEEEESSSTT--EEECCEESSS.EEEEEE-TTSS-EEEEESSSSCEEEEEEC...SCEEEEEEEEES--EEEE-TTSSEEEEE-TTSSS-EEEEEE CS
       eIF2A  36 ygetelyliklkkkksevvelkkegpihdvaWspkskefaviyGkmpakvslfdl...kvkviskleeqkrNtiffspkgklvllaGfgnlaGeleiwd 131
                  + ++l+ +++ ++++++ +l     +  +a sp++k  +++ G  +++++l+dl   kv+ +++ +eq   ++ fs +g++++ +  g+   +  +wd
  EPX72766.1 329 HTGQKLFTLNE-DSPDQSRDL----YVRTIAFSPDGK--YLVTGTEDRQIKLWDLatqKVRFLFSGHEQDIYSLDFSHNGRFIVSG-SGDH--TARLWD 417
                 55666666643.344444444....467788899988..5799***********955448888999999999**********9865.5666..5789** PP

                 TTTTEEEEEEE-TT-.-EEEE-TTSSEEEEEE-TTT-SSS-EEEEEETTTEEEEEE CS
       eIF2A 132 vkkkkkiakaeaana.tlvewspdgryvlTattaprlrvdngfkiwsysGklvykk 186
                 v++ ++i k+e +n  t +  sp+++y++  +      +d  +++ws+sG+lv++ 
  EPX72766.1 418 VETGQCILKLEIENGvTAIAISPNDQYIAVGS------LDQIIRVWSVSGTLVERL 467
                 ***********99862679********96543......7899***********976 PP

  == domain 3  score: 9.5 bits;  conditional E-value: 0.00085
                 EEECCEESSS.EEEEEE-TTSS-EEEEESSSSCEEEEEECSCEEEEEEEEES-..-EEEE-TTSSEEEEE-TTSSS-EEEEEETT..TTEEEEEEE-TT CS
       eIF2A  51 sevvelkkegpihdvaWspkskefaviyGkmpakvslfdlkvkviskleeqkr..NtiffspkgklvllaGfgnlaGeleiwdvk..kkkkiakaeaan 145
                 +++++l+ e+ + ++a sp+ + +av  G  ++ + ++++ + ++ +le +k+   +i fsp  k+++ + +  +   +++w+ +  +   ++ ++   
  EPX72766.1 422 QCILKLEIENGVTAIAISPNDQYIAV--GSLDQIIRVWSVSGTLVERLEGHKEsvYSIAFSPDSKILVSGSLDKT---IKVWELQfpQSVGLSAIKPDG 515
                 57788888888999999999997776..*************99999998665411689**********9998887...999998855444555555555 PP

                 --EEEE-TTSSEEEEEE-TT CS
       eIF2A 146 atlvewspdgryvlTattap 165
                   +  ++ ++++vl    +p
  EPX72766.1 516 VCKATYHGHSDFVLSVAVSP 535
                 55666666666666666665 PP

  == domain 4  score: 4.1 bits;  conditional E-value: 0.04
                 EEEEEETTTTEEEEEEE.-TT--.EEEE-TTSSEEEEEE CS
       eIF2A 126 eleiwdvkkkkkiakae.aanat.lvewspdgryvlTat 162
                 ++++wd ++ +++ + + ++n++ +v +spdg+ ++  +
  EPX72766.1 548 SIQFWDLQTGQSYLTCQgHKNSViSVSFSPDGKQFASGS 586
                 577888885555544431444442467888887776555 PP

>> PD40  WD40-like Beta Propeller Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       5.1   4.8e+03      16      24 ..     308     316 ..     305     316 .. 0.83
   2 !    9.3   0.0    0.0012       1.1      13      24 ..     352     363 ..     340     363 .. 0.91
   3 ?   -0.6   0.0       1.5   1.4e+03      12      24 ..     434     446 ..     432     446 .. 0.90
   4 ?    3.6   0.0     0.071        67      13      24 ..     476     487 ..     472     487 .. 0.86
   5 ?   -1.2   0.0       2.2   2.1e+03      15      23 ..     532     540 ..     530     541 .. 0.85
   6 ?    6.3   0.0      0.01       9.5      15      24 ..     574     583 ..     570     583 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 5.1
                 E-TTSSEEE CS
        PD40  16 fSPDGkrla 24 
                 fS +Gk la
  EPX72766.1 308 FSHNGKFLA 316
                 9*****986 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.0012
                 EEEE-TTSSEEE CS
        PD40  13 aPsfSPDGkrla 24 
                  ++fSPDGk+l+
  EPX72766.1 352 TIAFSPDGKYLV 363
                 689*******96 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 1.5
                 EEEEE-TTSSEEE CS
        PD40  12 gaPsfSPDGkrla 24 
                 +a+++SP+ +++a
  EPX72766.1 434 TAIAISPNDQYIA 446
                 689*****99997 PP

  == domain 4  score: 3.6 bits;  conditional E-value: 0.071
                 EEEE-TTSSEEE CS
        PD40  13 aPsfSPDGkrla 24 
                 +++fSPD k l+
  EPX72766.1 476 SIAFSPDSKILV 487
                 789*****9886 PP

  == domain 5  score: -1.2 bits;  conditional E-value: 2.2
                 EE-TTSSEE CS
        PD40  15 sfSPDGkrl 23 
                 ++SPD ++ 
  EPX72766.1 532 AVSPDNRWA 540
                 78****996 PP

  == domain 6  score: 6.3 bits;  conditional E-value: 0.01
                 EE-TTSSEEE CS
        PD40  15 sfSPDGkrla 24 
                 sfSPDGk +a
  EPX72766.1 574 SFSPDGKQFA 583
                 9******876 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0       0.3   2.8e+02     184     208 ..     297     321 ..     283     348 .. 0.82
   2 !    5.5   0.0    0.0075       7.1     190     218 ..     350     378 ..     323     406 .. 0.84
   3 ?    3.0   0.0     0.044        42     177     216 ..     420     459 ..     377     466 .. 0.82
   4 ?    2.8   0.0     0.048        45     185     217 ..     468     501 ..     460     552 .. 0.85
   5 ?    4.6   0.0     0.014        13     177     216 ..     556     596 ..     544     599 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.3
    Ge1_WD40 184 ieehsliveaafspdGtalatased 208
                 +e+ s + ++ fs +G  lat ++ 
  EPX72766.1 297 LEHPSVVCCTKFSHNGKFLATGCNR 321
                 44456899999**********9975 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.0075
    Ge1_WD40 190 iveaafspdGtalatasedGevkffqvyl 218
                 + + afspdG  l t +ed ++k++ +  
  EPX72766.1 350 VRTIAFSPDGKYLVTGTEDRQIKLWDLAT 378
                 66789********************8765 PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.044
    Ge1_WD40 177 ieegllkieehsliveaafspdGtalatasedGevkffqv 216
                 + + +lk+e +  ++  a+sp+   +a+ s d +++ + v
  EPX72766.1 420 TGQCILKLEIENGVTAIAISPNDQYIAVGSLDQIIRVWSV 459
                 34567888889999999*******************9987 PP

  == domain 4  score: 2.8 bits;  conditional E-value: 0.048
    Ge1_WD40 185 eehs.liveaafspdGtalatasedGevkffqvy 217
                 e h   + + afspd   l   s d ++k + + 
  EPX72766.1 468 EGHKeSVYSIAFSPDSKILVSGSLDKTIKVWELQ 501
                 55544788999******************99875 PP

  == domain 5  score: 4.6 bits;  conditional E-value: 0.014
    Ge1_WD40 177 ieegllkieehs.liveaafspdGtalatasedGevkffqv 216
                 + +++l  + h   +++ +fspdG   a  s d   + + +
  EPX72766.1 556 TGQSYLTCQGHKnSVISVSFSPDGKQFASGSGDLRARIWSI 596
                 456788899886699****************9999888876 PP

>> Nucleoporin_N  Nup133 N terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.1     0.049        46     199     231 ..     428     460 ..     313     468 .. 0.62
   2 !    5.8   0.2    0.0051       4.8     199     234 ..     469     504 ..     400     513 .. 0.79
   3 !    8.8   0.0   0.00064      0.61     204     277 ..     528     600 ..     518     601 .] 0.87

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.049
                    --GG-EEEEEEECCTCEEEEEETTSEEEEEEEE CS
  Nucleoporin_N 199 sereeivqlridssrrilytlsskgvirvydls 231
                      ++ +++++i++  + + + s +  irv+ +s
     EPX72766.1 428 EIENGVTAIAISPNDQYIAVGSLDQIIRVWSVS 460
                    344556666666666666666666666666655 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0051
                    --GG-EEEEEEECCTCEEEEEETTSEEEEEEEETTC CS
  Nucleoporin_N 199 sereeivqlridssrrilytlsskgvirvydlsasn 234
                      +e++ +++ ++ ++il++ s +++i+v++l++++
     EPX72766.1 469 GHKESVYSIAFSPDSKILVSGSLDKTIKVWELQFPQ 504
                    367888888999999999999999999999998876 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.00064
                    EEEEEEECCTCEEEEEETTSEEEEEEEETTCEE-EEEEEEEHHHHHHHH..HHSCHTTTCGCTTT-EEEEEEES- CS
  Nucleoporin_N 204 ivqlridssrrilytlsskgvirvydlsasngesslksdidirqillea.itesliasaplaskslkildispvs 277
                    + ++++++  r+  + s ++ i+++dl+   g+s+l+ + + +++++ + ++ + + ++ +++ + +i++i+p s
     EPX72766.1 528 VLSVAVSPDNRWALSGSKDRSIQFWDLQ--TGQSYLTCQGHKNSVISVSfSPDGKQFASGSGDLRARIWSIVPAS 600
                    6789999999******************..5689999999999999999777777777799999*******9976 PP

>> Cytochrom_D1  Cytochrome D1 heme domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0   0.00032      0.31      41      95 ..     353     408 ..     343     420 .. 0.86
   2 ?    2.8   0.0     0.036        34      33      94 ..     523     585 ..     516     587 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00032
                   EE-TT.SSEEEEEETTSEEEEEESSSSSEEEEEE-SSEE..EEEEE--TTSEEEEEE CS
  Cytochrom_D1  41 rvfasdgRyvyvigRDgkvtliDLwakeivaevkiGlna..rsvavSqddryvivgn 95 
                     f++dg+y+ + + D +++l DL +++ v+ +  G +    s++ S+++r+++ g+
    EPX72766.1 353 IAFSPDGKYLVTGTEDRQIKLWDLATQK-VRFLFSGHEQdiYSLDFSHNGRFIVSGS 408
                   579*********************8887.67788887642279***********996 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.036
                   -STTEEEEEE-TT.SSEEEEEETTSEEEEEESSSSSEEEEEE-SSEE.EEEEE--TTSEEEEE CS
  Cytochrom_D1  33 tgyalHisrvfasdgRyvyvigRDgkvtliDLwakeivaevkiGlna.rsvavSqddryvivg 94 
                   ++ +   s+  ++d+R+++  ++D  ++  DL + +   + +   n+ +sv  S d++  + g
    EPX72766.1 523 GHSDFVLSVAVSPDNRWALSGSKDRSIQFWDLQTGQSYLTCQGHKNSvISVSFSPDGKQFASG 585
                   56666779999*********************9988776666555543677788888877666 PP

>> Dynactin_p22  Dynactin subunit p22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   2.8   1.9e-05     0.018      46     129 ..       5      88 ..       2     103 .. 0.92

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.9e-05
  Dynactin_p22  46 skrekikellkkleelekyLdpeyedseelpdevKleliLaeedeLkktaalleqlqeLkpvldseeikdvpelkekLekLsqi 129
                     +++++e+l+ l+   ++L+ + +++e+ +d+ ++ +iL++ ++++++ + l+++ e+++ + +++ k+v+  k +L  L + 
    EPX72766.1   5 DRNKNVQEVLDALKSEYDLLNKNSSSTESHADNYETSMILSQIQDIEDFRKTLDDMIEKQKAIRETYEKEVNAIKHELDALGVD 88 
                   5688999**************999999999************************************************999765 PP

>> APG17  Autophagy protein Apg17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   3.2   2.8e-05     0.027     238     319 ..       8      84 ..       2      86 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 2.8e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH....HHHHHHHHHHHHHHHHHH...HHHHHHHHHHH CS
       APG17 238 aeledVvkelqerleemekakkllsekkeeiekllsalkkaleeleevgkklpeylaifkaeeeflerweeekekieeklee 319
                 + +++V++ l+++++ ++k +++ +++++++e++   + ++++++e+++k+l+++++   ++++++e++e+e + i+++l+ 
  EPX72766.1   8 KNVQEVLDALKSEYDLLNKNSSSTESHADNYETS--MILSQIQDIEDFRKTLDDMIE---KQKAIRETYEKEVNAIKHELDA 84 
                 689***************************9975..68999****************...8888888887788888777765 PP

>> PI3K_P85_iSH2  Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   1.4   8.7e-05     0.082      87     135 ..      37      85 ..       7      88 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 8.7e-05
  PI3K_P85_iSH2  87 qenleqlksrlkelhsskekLeedlkqqkeeereleReinalkpellqL 135
                    +   + + s+++ +++ ++ L++ +++qk+   + e+e+na+k el  L
     EPX72766.1  37 NYETSMILSQIQDIEDFRKTLDDMIEKQKAIRETYEKEVNAIKHELDAL 85 
                    3344567899**********************************99765 PP

>> SHE3  SWI5-dependent HO expression protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   6.0   8.7e-05     0.082      69     163 ..       8     104 ..       5     110 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 8.7e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSX.XXXXXXXXX CS
        SHE3  69 kdlekelselkesveelklekkqlkkrlenssase.teleeelerlkvqYdalvdsqkeYkehYqqeieeLkesleklklenekqle.elqerissn 163
                 k++++ l  lk++++ l+++    + +++n + s   + ++++e  +   d +++ qk  +e Y++e++ +k++l++l  +  +  +  ++er++++
  EPX72766.1   8 KNVQEVLDALKSEYDLLNKNSSSTESHADNYETSMiLSQIQDIEDFRKTLDDMIEKQKAIRETYEKEVNAIKHELDALGVDAFNSTKpSFNERVNKD 104
                 7788889999*****999999999999998876651567899***********************************99887655442455666655 PP

>> FliJ  Flagellar FliJ protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   1.0   0.00017      0.16      10      82 ..      10      82 ..       5      85 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00017
        FliJ 10 aqrelqqaeekleeleqyrqeyqkqlsgeaqglsaaelrnyqafisaldeaiaqqkqelaqaekqvekareew 82
                +q  l++ +++ + l+++ ++ ++ + +  + +  ++++ ++ f+++ld++i++qk   +  ek+v++ ++e+
  EPX72766.1 10 VQEVLDALKSEYDLLNKNSSSTESHADNYETSMILSQIQDIEDFRKTLDDMIEKQKAIRETYEKEVNAIKHEL 82
                56666777777777777777775555555478999*******************************9998876 PP

>> UPF0242  Uncharacterised protein family (UPF0242) N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   5.2   0.00025      0.24      92     166 ..       8      83 ..       3      85 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00025
     UPF0242  92 eelqeeeeeLkeeldakee..elerlkeenqqLqekleaiaedfeelkleleeqLaekqellqeyqetieeqrsvle 166
                 +++qe  + Lk e+d  ++   + + + +n + ++ l++  +d+e++++ l++ +++++   ++y+++++  + +l+
  EPX72766.1   8 KNVQEVLDALKSEYDLLNKnsSSTESHADNYETSMILSQ-IQDIEDFRKTLDDMIEKQKAIRETYEKEVNAIKHELD 83 
                 78999999*****98755500556667778888888888.67****************************9999987 PP

>> Vps16_N  Vps16, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   0.00033      0.31      31      96 ..     422     487 ..     412     525 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00033
     Vps16_N  31 dllvavapygGpiAvtrspsklepa.adarPvyiqiyslsGrlLkkllwnkeklvklgwseeeeLiv 96 
                 ++++++    G  A+++sp  +  a ++     i+++s+sG l+++l  +ke++ ++ +s + +++v
  EPX72766.1 422 QCILKLEIENGVTAIAISPNDQYIAvGSLDQ-IIRVWSVSGTLVERLEGHKESVYSIAFSPDSKILV 487
                 5888888888999999999767666455555.5***************************9999775 PP

>> Golgin_A5  Golgin subfamily A member 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   3.3   0.00041      0.39      42     142 ..       7     102 ..       2     110 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00041
   Golgin_A5  42 stalsaeldelkqerdllreelqklnqqieqlrtelqdleaqqqaeaeslreqlqeleeqleeerkakeeveaelerlkeelryleeelv.rskatlqs 139
                 ++ ++  ld+lk+e dll++++ +++++ ++  t +      q +++e +    + l++ +e++++ +e++e+e++ +k+el++l  +    +k ++++
  EPX72766.1   7 NKNVQEVLDALKSEYDLLNKNSSSTESHADNYETSMILS---QIQDIEDF---RKTLDDMIEKQKAIRETYEKEVNAIKHELDALGVDAFnSTKPSFNE 99 
                 55678889999*******999999999999999985433...33344444...457788889999******************9987764145666666 PP

   Golgin_A5 140 rik 142
                 r++
  EPX72766.1 100 RVN 102
                 664 PP

>> TACC_C  Transforming acidic coiled-coil-containing protein (TACC), C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   3.8   0.00047      0.45       4      97 ..       8     103 ..       5     110 .. 0.69

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00047
      TACC_C   4 kdldaalekvkeeveekeeeiqelkkkveelkkenqemkki......vaefektiaqlieekqkqkelakkeiqkvleekeqllad.lnsveksfsdlf 95 
                 k+++++l ++k e +  +++     ++ +e++++n e + i      +++f kt+ ++ie++++ +e  +ke++ +++e ++l  d +ns++ sf++ +
  EPX72766.1   8 KNVQEVLDALKSEYDLLNKN-----SSSTESHADNYETSMIlsqiqdIEDFRKTLDDMIEKQKAIRETYEKEVNAIKHELDALGVDaFNSTKPSFNERV 101
                 66666666666666653333.....3333444444333333111144689*********************************8874688888999865 PP

      TACC_C  96 kr 97 
                 ++
  EPX72766.1 102 NK 103
                 55 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (601 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1140  (0.0635841); expected 358.6 (0.02)
Passed bias filter:                      734  (0.0409393); expected 358.6 (0.02)
Passed Vit filter:                        99  (0.00552178); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              19  [number of targets reported over threshold]
# CPU time: 0.80u 0.32s 00:00:01.12 Elapsed: 00:00:00.49
# Mc/sec: 3684.28
//
Query:       EPX72767.1  [L=98]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.1e-09   36.6   0.1      4e-09   36.2   0.1    1.1  1  UPF0139   Uncharacterised protein family (UPF0139)


Domain annotation for each model (and alignments):
>> UPF0139  Uncharacterised protein family (UPF0139)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.2   0.1   2.2e-13     4e-09       3      90 ..       4      85 ..       2      92 .. 0.87

  Alignments for each domain:
  == domain 1  score: 36.2 bits;  conditional E-value: 2.2e-13
     UPF0139  3 sdprrpekakrykppalssqkedltpdymnllgmifsllglmlklkwcaWvalvcslisfanskssddlkqilssfmlsvsalvmsYl 90
                 dp+r++ +++yk+   s++  d  +  +   +  + + +l+l++k  aW a ++++  + ns ss +   + ++fm  + alv++Yl
  EPX72767.1  4 VDPKRADLVVPYKAIPRSQD--DVGITTV---STFVCMAALFLRIKFIAWSAFILAASNLLNSTSSPNSSPMSMAFM-GLAALVSTYL 85
                59***********9999988..6655444...4446789******************************99999886.899******8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       550  (0.0306766); expected 358.6 (0.02)
Passed bias filter:                      298  (0.0166211); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.41
# Mc/sec: 720.14
//
Query:       EPX72768.1  [L=151]
Description: Rad6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      8e-51  171.4   0.0    9.1e-51  171.2   0.0    1.0  1  UQ_con     Ubiquitin-conjugating enzyme
    0.00032   20.4   0.0    0.00037   20.2   0.0    1.1  1  Prok-E2_B  Prokaryotic E2 family B
  ------ inclusion threshold ------
       0.04   14.2   0.0      0.045   14.0   0.0    1.4  1  RWD        RWD domain
      0.084   12.7   0.0       0.13   12.1   0.0    1.3  1  UEV        UEV domain


Domain annotation for each model (and alignments):
>> UQ_con  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  171.2   0.0     2e-54   9.1e-51       1     139 [.       8     144 ..       8     145 .. 0.98

  Alignments for each domain:
  == domain 1  score: 171.2 bits;  conditional E-value: 2e-54
                 HHHHHHHHHHHSTTTTEEEEEEETTEECEEEEEEEB.TTSTTTTEEEEEEEE--TTTTTS--EEEESST-SCTTBETTSBB-CGGGSTTT--TTSHHHH CS
      UQ_con   1 rlqkelkelakkkpsgisaklvddenlfewkvlikgpedtpYeggvFklelefpedYPlkpPkvkfvtkifHPnvdksGevcldiLkeekWspaltles 99 
                 rl++++k++++++p g+sa++v+d n++ w+++i+gp+dtp+e+g+Fkl l+f+e+YP+kpP vkfv+ +fHPnv+++Ge+cldiL+ ++Wsp++++  
  EPX72768.1   8 RLMRDFKRMQQDPPAGVSASPVSD-NVMLWNAVIIGPADTPFEDGTFKLVLSFDEQYPNKPPLVKFVSTMFHPNVYANGELCLDILQ-NRWSPTYDVAA 104
                 899********************8.**************************************************************.55********* PP

                 HHHHHHHHHHS--TTS-SSHHHHHHHHHTHHHHHHHHHHH CS
      UQ_con 100 vllsiqsLlaepnpesplnkeaakllkkdreeykkkvkey 139
                 +l+siqsLl++pn+ sp+n+eaa+l +++++ey ++v+++
  EPX72768.1 105 ILTSIQSLLNDPNNASPANAEAAQLHRENKKEYIRRVRKT 144
                 ************************************9875 PP

>> Prok-E2_B  Prokaryotic E2 family B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.0   8.2e-08   0.00037      34     121 ..      49     137 ..       8     141 .. 0.84

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 8.2e-08
   Prok-E2_B  34 sggtvdlrlvypdsfpllppavflqdpeqlkllpHintfggaLClleeeldldewdpngsvadvleqlqqvLn.egisgde.......daefagEf 121
                 + gt++l l +++++p  pp v  +        p ++  +g+LCl       + w p   va++l+++q +Ln  + ++         + e+ +E+
  EPX72768.1  49 EDGTFKLVLSFDEQYPNKPPLVKFVSTM---FHPNVYA-NGELCL---DILQNRWSPTYDVAAILTSIQSLLNdPNNASPAnaeaaqlHRENKKEY 137
                 6799********************9999...7899999.9*****...8999*********************95555555355555555555554 PP

>> RWD  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0     1e-05     0.045      54      96 ..      52     113 ..      15     150 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1e-05
                 EEEEEEEE-SSTTSS--EEEEEECC...................SS-HHHHHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx...................xxxxxxxxxxxxxxxxxx RF
         RWD  54 slkleiklpeeYPeeaPiislsste...................nlpkeqvksleekleela 96 
                 ++kl  ++ e+YP+++P +++ st                    + p ++v+ + + +++l+
  EPX72768.1  52 TFKLVLSFDEQYPNKPPLVKFVSTMfhpnvyangelcldilqnrWSPTYDVAAILTSIQSLL 113
                 789999*****************998888888887777777777666666666666666555 PP

>> UEV  UEV domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   2.8e-05      0.13      56     120 ..      59     121 ..      47     122 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.8e-05
                 --TTTTTS--EEEE-GCC--TSGGGGGB-TTSBB--HHHHS.--T..TT--HHHHHHHHHH-----XX CS
         UEV  56 vlesyPveaPivyvkptksmvikknenvdaqGlvylpyLee.Wkr..eksnlvslvqelaqafeeesP 120
                   e+yP+++P+v   +t       + nv a+G + l++L++ W++    + +++ +q+l +  ++ sP
  EPX72768.1  59 FDEQYPNKPPLVKFVSTMF-----HPNVYANGELCLDILQNrWSPtyDVAAILTSIQSLLNDPNNASP 121
                 5689*******98888877.....669************86377744455577888888888888777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       570  (0.0317921); expected 358.6 (0.02)
Passed bias filter:                      470  (0.0262145); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1101.90
//
Query:       EPX72769.1  [L=331]
Description: U3 snoRNP-associated protein Lcp5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-10   40.6   2.0    2.9e-10   40.6   2.0    2.9  3  Sas10_Utp3  Sas10/Utp3/C1D family
    0.00013   22.4   0.3     0.0003   21.3   0.3    1.6  1  CDV3        Carnitine deficiency-associated protein 3
  ------ inclusion threshold ------
       0.13   12.5   0.4       0.13   12.5   0.4    2.2  2  FCH         Fes/CIP4, and EFC/F-BAR homology domain


Domain annotation for each model (and alignments):
>> Sas10_Utp3  Sas10/Utp3/C1D family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.6   2.0   4.9e-14   2.9e-10       6      87 .]       6      75 ..       2      75 .. 0.79
   2 ?   -1.2   1.7      0.53   3.2e+03      14      33 ..      86     112 ..      81     172 .. 0.59
   3 ?   -2.8   0.2       1.8   1.1e+04      16      46 ..     234     260 ..     230     263 .. 0.44

  Alignments for each domain:
  == domain 1  score: 40.6 bits;  conditional E-value: 4.9e-14
  Sas10_Utp3  6 ksldelqeslepllskakaeekkslsdeklsegisllslKnelllaYllnlllylllklsg.velkdhpvvkeLvrlRvyleK 87
                ksl ++ esl++ l+             ++seg+sl slK +ll++Y++ l++++l kl+g   l+   vv++LvrlR  +eK
  EPX72769.1  6 KSLVSALESLPKDLK-------------PTSEGVSLVSLKTQLLISYVQKLAFLILVKLEGkSYLEFQNVVEKLVRLRLEIEK 75
                555555555555444.............7889*****************************64444467*********98887 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.53
  Sas10_Utp3  14 slepllskakaee..kkslsd......e 33 
                 sl++ll +a+++e  + sls        
  EPX72769.1  86 SLDKLLRAAERKEelE-SLSTsgmdggI 112
                 5666666544444332.22222333331 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 1.8
  Sas10_Utp3  16 epllskakaee..kkslsdeklsegisllslKn 46 
                 e++ ++a+ ee            +++s  +lKn
  EPX72769.1 234 EKMRERAEYEEsnY------TRLPKLSKKELKN 260
                 44444443333321......1223355555555 PP

>> CDV3  Carnitine deficiency-associated protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.3   5.1e-08    0.0003      52     111 ..     132     195 ..     100     207 .. 0.66

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 5.1e-08
        CDV3  52 stdkssgPWnksaaaeqpaae.etkpveeepvpeeaktsgvYrPPaarntttake...rrkrkq 111
                  +d++++P  k + ++++++  + ++v++e +++e kt gvYrPP++r+ t   e   rr+ +q
  EPX72769.1 132 ESDEEESPAAKGKHKKSNKKDvSSEEVSSESEEDESKTDGVYRPPRIRAVTMDDEkkpRRRPNQ 195
                 4567777777766655555440344444444444559***********9887544454454444 PP

>> FCH  Fes/CIP4, and EFC/F-BAR homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1      0.47   2.8e+03      15      31 ..      59      75 ..      54      76 .. 0.80
   2 ?   12.5   0.4   2.2e-05      0.13      23      52 ..     236     266 ..     231     309 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.47
                HHHHHHHHHHHHHHHHH CS
         FCH 15 lledlqeflkeRaeiEk 31
                + + ++++++ R eiEk
  EPX72769.1 59 FQNVVEKLVRLRLEIEK 75
                556688999******98 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 2.2e-05
                 HHHHHHHHHHHHHHHHHHCT----TT.-... CS
         FCH  23 lkeRaeiEkeYakkLqkLakkylkrr.kkks 52 
                 ++eRae E+    +L kL+kk lk+  k k+
  EPX72769.1 236 MRERAEYEESNYTRLPKLSKKELKNVkKPKK 266
                 79**********************8855554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1244  (0.0693848); expected 358.6 (0.02)
Passed bias filter:                      542  (0.0302304); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.44
# Mc/sec: 2254.44
//
Query:       EPX72770.1  [L=436]
Description: pig-V [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.7e-42  144.0  43.5    7.8e-40  137.5  43.5    2.1  1  Mannosyl_trans2  Mannosyltransferase (PIG-V)


Domain annotation for each model (and alignments):
>> Mannosyl_trans2  Mannosyltransferase (PIG-V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.5  43.5   4.4e-44   7.8e-40      18     443 .]      62     436 .]      45     436 .] 0.85

  Alignments for each domain:
  == domain 1  score: 137.5 bits;  conditional E-value: 4.4e-44
  Mannosyl_trans2  18 LviLfrialipddtsealnppcllaspslvdslvekllenlvsWDsvyflkiaenGyeyeheyaflpllplfvsllskevlaplvgllslravl 111
                      + +L+    + d+t++++        + + ++l  ++++  + WD++yf+ +a +  ++e+e+af++ ++  ++ +     +  v +l+l a+ 
       EPX72770.1  62 IAFLTSFFSVFDHTANLYLSQN---DSQIRNNLLGGFFKAWIRWDAIYFVDMALQNRLFEQEWAFSDFWSALIRFVCFGSKD--VVVLGLAAC- 149
                      5566665555666666554443...57788999****************************************999833333..334555554. PP

  Mannosyl_trans2 112 vlsvfslsillfllaavilsdvsvlvlkareasfkasllfclspaavflasiYseaLfallafsgvyslesgisissvllfalstivrsnglvs 205
                            l+i+l+ +aa +++  + ++  ++++s  + ++++lspa +f++ +Y e+ fa  +f g+    + +++ ++l+++ st  rsng+  
       EPX72770.1 150 -----CLAIVLHAVAAAAFYCTTKVIFLDKQISVLSIIFYLLSPAGIFMSVGYTESAFAACSFLGLLCFVRKRQTLAMLFWSISTFFRSNGIFW 238
                      .....6778899999999999999999999***99999999****************************************************9 PP

  Mannosyl_trans2 206 vgflmfsllqrffeaLielrkarkllkvliallLsvillflplvlfqyYaYkqfClqrsaGdevpWCksdvpllYsyiqshYWgvGlLkYyelk 299
                          ++ +++  ++   +     k+++       ++i +++p+ + q+ aYk fC++        WC s +p +Y  +q++YW++G+L Y++++
       EPX72770.1 239 SFLFVIPTVESLYSFARQEVGFTKFFRTAFINGCRCIEIVIPFFYGQFQAYKVFCPHA------SWCLSYLPFIYPAVQKKYWNIGFLSYWTPN 326
                      9999999*******88899999999999888889*********************987......6***************************** PP

  Mannosyl_trans2 300 qvPnfLlaaPvlilvvysilsyvksrpelflslGlqaseknkklekakdltylsadvfvlvvhaavlvviaflimhvqvltrflsasPllyWfa 393
                      ++PnfLla   ++ +v+s ++ ++          +++++   +              + +++   + + ++++ mh qv++r+ sa PllyW +
       EPX72770.1 327 NIPNFLLACITIVPLVFSLWY-ST---------SFIRTDATIR--------------YLFILS-LFYLYLGIFQMHTQVINRLSSAFPLLYWSL 395
                      **********99999**9986.55.........4899987777..............234444.3567889*********************** PP

  Mannosyl_trans2 394 adllqktdlkkkkwkplaedkivklliyWkacaayilLgtlLfanflPft 443
                      a+   +++  + ++          +l+ W     y l++  L+ +flP++
       EPX72770.1 396 AHAWSRSSSLHIRKFTE------AILFSWVL---YSLIQAGLYGSFLPPA 436
                      ***99876555444333......57899998...99************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (436 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       903  (0.0503653); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 3038.69
//
Query:       EPX72771.1  [L=190]
Description: hypothetical protein SOCG_00533 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.3e-25   85.0  10.9    2.8e-07   29.6   0.6    5.1  6  EF-hand_1     EF hand
    1.8e-24   86.0   5.1      1e-14   54.7   0.3    3.1  3  EF-hand_7     EF-hand domain pair
    4.6e-24   82.3   5.5    4.1e-07   29.4   0.1    5.1  5  EF-hand_6     EF-hand domain
    3.6e-17   61.0   7.0    1.4e-05   24.3   0.2    4.6  5  EF-hand_5     EF hand
      2e-14   53.2   8.7    9.9e-06   25.3   0.5    4.1  4  EF-hand_8     EF-hand domain pair
    3.2e-08   33.5   7.4       0.45   10.5   0.1    4.1  4  EF-hand_4     Cytoskeletal-regulatory complex EF hand
    0.00015   22.0   0.8      0.035   14.4   0.1    3.2  3  EF-hand_9     EF-hand domain
     0.0011   19.3   3.2       0.58   10.5   0.3    3.3  2  SPARC_Ca_bdg  Secreted protein acidic and rich in cysteine Ca
  ------ inclusion threshold ------
      0.014   15.5   0.0      0.024   14.7   0.0    1.4  1  S10_plectin   Plectin/S10 domain
      0.031   14.1   4.3         14    5.7   0.0    3.6  3  EF-hand_10    EF hand
      0.049   12.5   0.4        3.8    6.3   0.2    2.1  2  DUF1679       Protein of unknown function (DUF1679)
      0.073   13.0   0.2       0.13   12.3   0.2    1.4  1  Pan3_PK       Pan3 Pseudokinase domain
          1    9.3   3.5        9.5    6.2   0.1    3.0  2  Pam16         Pam16


Domain annotation for each model (and alignments):
>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       2.3   3.2e+03      16      28 ..       7      19 ..       7      20 .. 0.80
   2 ?   -2.1   0.0       2.8   3.8e+03      18      27 ..      23      32 ..      21      34 .. 0.76
   3 ?    4.7   0.0     0.019        26      14      27 ..      40      53 ..      40      55 .. 0.87
   4 !   29.3   0.2   2.6e-10   3.6e-07       3      27 ..      66      90 ..      64      92 .. 0.90
   5 !   25.2   0.0   5.2e-09   7.1e-06       2      26 ..     101     125 ..     100     128 .. 0.89
   6 !   29.6   0.6     2e-10   2.8e-07       2      27 ..     149     174 ..     148     176 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 2.3
                EEEHHHHHHHHHH CS
   EF-hand_1 16 kIdfeEfkellkk 28
                k++ ++++el+++
  EPX72771.1  7 KLSQDQLQELVRS 19
                6788999999886 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 2.8
                EHHHHHHHHH CS
   EF-hand_1 18 dfeEfkellk 27
                d++E++++ k
  EPX72771.1 23 DKKELQQWYK 32
                7889998876 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.019
                SSEEEHHHHHHHHH CS
   EF-hand_1 14 dGkIdfeEfkellk 27
                +G +++eEf+++ k
  EPX72771.1 40 SGNLNKEEFQKIYK 53
                799*******9977 PP

  == domain 4  score: 29.3 bits;  conditional E-value: 2.6e-10
                HHHHHHHTTTSSSEEEHHHHHHHHH CS
   EF-hand_1  3 keiFrefDkDgdGkIdfeEfkellk 27
                + +F++fD+D++G+Idf+Ef+ +l+
  EPX72771.1 66 EYVFNVFDTDKNGTIDFKEFICALS 90
                568*****************99885 PP

  == domain 5  score: 25.2 bits;  conditional E-value: 5.2e-09
                 HHHHHHHHTTTSSSEEEHHHHHHHH CS
   EF-hand_1   2 lkeiFrefDkDgdGkIdfeEfkell 26 
                 l ++F+++D D++G I+++E+++++
  EPX72771.1 101 LVWAFQLYDLDNNGLISYNEMLQIV 125
                 5689*****************9987 PP

  == domain 6  score: 29.6 bits;  conditional E-value: 2e-10
                 HHHHHHHHTTTSSSEEEHHHHHHHHH CS
   EF-hand_1   2 lkeiFrefDkDgdGkIdfeEfkellk 27 
                 +++iF+++Dk++dG++++eEf+e  k
  EPX72771.1 149 VNKIFSMMDKNKDGQLNLEEFREGSK 174
                 789*******************9766 PP

>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.1   0.00032      0.44      18      71 .]       7      53 ..       4      53 .. 0.87
   2 !   21.6   0.1   1.6e-07   0.00023      46      69 ..      65      88 ..      56      90 .. 0.88
   3 !   54.7   0.3   7.2e-18     1e-14       2      68 ..      99     171 ..      98     174 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00032
   EF-hand_7 18 yldkeellrllrkifqgagegsklsdeelellfkefDtdk.dGvisfdEFlklyr 71
                +l++++l++l+r      ++ ++  ++el+++ k f +d+ +G ++ +EF+k+y+
  EPX72771.1  7 KLSQDQLQELVR------STRFD--KKELQQWYKGFFKDCpSGNLNKEEFQKIYK 53
                688999999999......66655..578********999988**********996 PP

  == domain 2  score: 21.6 bits;  conditional E-value: 1.6e-07
   EF-hand_7 46 lellfkefDtdkdGvisfdEFlkl 69
                 e++f+ fDtdk+G+i+f EF  +
  EPX72771.1 65 AEYVFNVFDTDKNGTIDFKEFICA 88
                79*******************976 PP

  == domain 3  score: 54.7 bits;  conditional E-value: 7.2e-18
   EF-hand_7   2 eklkeaFkelDtdgdgyldkeellrllrkifqgagegsklsdee......lellfkefDtdkdGvisfdEFlk 68 
                 +kl +aF+++D d++g ++++e+l+++ +i+ + g ++kl+++e      + ++f ++D++kdG+++++EF++
  EPX72771.1  99 DKLVWAFQLYDLDNNGLISYNEMLQIVDAIYKMVGSMVKLPEDEdtpekrVNKIFSMMDKNKDGQLNLEEFRE 171
                 6899******************888****999997777777766666667*********************97 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.31   4.3e+02      18      27 ..      23      32 ..       5      34 .. 0.79
   2 !    9.7   0.0   0.00062      0.86       1      27 [.      26      53 ..      26      56 .. 0.91
   3 !   29.4   0.1   2.9e-10   4.1e-07       3      27 ..      66      90 ..      64      97 .. 0.92
   4 !   19.3   0.0   5.2e-07   0.00072       5      26 ..     104     125 ..     104     133 .. 0.92
   5 !   22.3   0.1   5.6e-08   7.8e-05       2      24 ..     149     171 ..     148     177 .. 0.91

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.31
   EF-hand_6 18 daeElrkalr 27
                d++El+++++
  EPX72771.1 23 DKKELQQWYK 32
                7888888876 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00062
   EF-hand_6  1 elreaFklfDkd.gdGkidaeElrkalr 27
                el++ +k f kd  +G +++eE++k+++
  EPX72771.1 26 ELQQWYKGFFKDcPSGNLNKEEFQKIYK 53
                678899999*9***************98 PP

  == domain 3  score: 29.4 bits;  conditional E-value: 2.9e-10
   EF-hand_6  3 reaFklfDkdgdGkidaeElrkalr 27
                +++F+ fD+d++G+id++E++ al+
  EPX72771.1 66 EYVFNVFDTDKNGTIDFKEFICALS 90
                689********************98 PP

  == domain 4  score: 19.3 bits;  conditional E-value: 5.2e-07
   EF-hand_6   5 aFklfDkdgdGkidaeElrkal 26 
                 aF+l+D d++G i+++E+ ++ 
  EPX72771.1 104 AFQLYDLDNNGLISYNEMLQIV 125
                 7*****************9986 PP

  == domain 5  score: 22.3 bits;  conditional E-value: 5.6e-08
   EF-hand_6   2 lreaFklfDkdgdGkidaeElrk 24 
                 ++++F ++Dk++dG+++ eE+r 
  EPX72771.1 149 VNKIFSMMDKNKDGQLNLEEFRE 171
                 689******************96 PP

>> EF-hand_5  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       4.4   6.1e+03      17      23 ..      23      29 ..      23      29 .. 0.82
   2 ?    3.8   0.0     0.031        43      13      24 ..      40      51 ..      40      52 .. 0.87
   3 !   20.1   0.2   2.2e-07   0.00031       4      21 ..      68      85 ..      64      87 .. 0.92
   4 !   13.5   0.0   2.8e-05     0.038       4      24 ..     104     124 ..     101     125 .. 0.88
   5 !   24.3   0.2     1e-08   1.4e-05       2      23 ..     150     171 ..     149     173 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 4.4
                -HHHHHH CS
   EF-hand_5 17 skeELkt 23
                +k EL++
  EPX72771.1 23 DKKELQQ 29
                7899986 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.031
                SSCE-HHHHHHH CS
   EF-hand_5 13 DGkIskeELktl 24
                +G ++keE++++
  EPX72771.1 40 SGNLNKEEFQKI 51
                6999*****985 PP

  == domain 3  score: 20.1 bits;  conditional E-value: 2.2e-07
                HHHHH-SS-SSCE-HHHH CS
   EF-hand_5  4 tFqaiDlNgDGkIskeEL 21
                +F+ +D+++ G+I++ E+
  EPX72771.1 68 VFNVFDTDKNGTIDFKEF 85
                7****************9 PP

  == domain 4  score: 13.5 bits;  conditional E-value: 2.8e-05
                 HHHHH-SS-SSCE-HHHHHHH CS
   EF-hand_5   4 tFqaiDlNgDGkIskeELktl 24 
                 +Fq  Dl++ G Is  E  ++
  EPX72771.1 104 AFQLYDLDNNGLISYNEMLQI 124
                 4****************8765 PP

  == domain 5  score: 24.3 bits;  conditional E-value: 1e-08
                 HHHHHHH-SS-SSCE-HHHHHH CS
   EF-hand_5   2 kdtFqaiDlNgDGkIskeELkt 23 
                 ++ F+++D+N+DG+++ eE+++
  EPX72771.1 150 NKIFSMMDKNKDGQLNLEEFRE 171
                 789*****************96 PP

>> EF-hand_8  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       1.8   2.4e+03      20      33 ..       4      18 ..       1      26 [. 0.74
   2 !   25.3   0.5   7.2e-09   9.9e-06       2      49 ..      40      86 ..      39      92 .. 0.81
   3 !   12.4   0.0   7.6e-05      0.11      25      49 ..      98     122 ..      87     126 .. 0.85
   4 !   18.5   0.2   9.6e-07    0.0013       8      50 ..     126     171 ..     125     175 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.8
   EF-hand_8 20 kk.glseeevdilfr 33
                 + +ls +++++l+r
  EPX72771.1  4 SQsKLSQDQLQELVR 18
                445688888888876 PP

  == domain 2  score: 25.3 bits;  conditional E-value: 7.2e-09
   EF-hand_8  2 kgkItreelrrilril..glkkglseee.vdilfrefDtdgdGkisfeEFc 49
                +g + +ee+++i++++         +++ ++ +f+ fDtd++G+i+f+EF+
  EPX72771.1 40 SGNLNKEEFQKIYKLFfpF----GDPSAfAEYVFNVFDTDKNGTIDFKEFI 86
                6777788999988776331....567778999******************7 PP

  == domain 3  score: 12.4 bits;  conditional E-value: 7.6e-05
   EF-hand_8  25 eeevdilfrefDtdgdGkisfeEFc 49 
                 ++++ + f + D+d++G is++E +
  EPX72771.1  98 DDKLVWAFQLYDLDNNGLISYNEML 122
                 57788999**************965 PP

  == domain 4  score: 18.5 bits;  conditional E-value: 9.6e-07
   EF-hand_8   8 eelrril.rilglkk..glseeevdilfrefDtdgdGkisfeEFcv 50 
                 +  ++++ ++++l++  ++ e+ v  +f+ +D ++dG +++eEF +
  EPX72771.1 126 DAIYKMVgSMVKLPEdeDTPEKRVNKIFSMMDKNKDGQLNLEEFRE 171
                 56678888888898899999999*********************76 PP

>> EF-hand_4  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.1    0.0032       4.4      22      73 ..       4      56 ..       1      60 [. 0.82
   2 !   10.5   0.1   0.00032      0.45      46      71 ..      66      91 ..      60      94 .. 0.87
   3 !    9.5   0.2   0.00064      0.88      42      83 ..      98     138 ..      88     146 .. 0.83
   4 !    9.0   0.1   0.00096       1.3      41      65 ..     145     169 ..     137     172 .. 0.90

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0032
   EF-hand_4 22 ednkltgdkvapvlknskleedklekiwd..ladidedgkldfeefciamrlif 73
                +++kl++d++  +++++++++++l++ ++  + d    g+l+ eef  + +l f
  EPX72771.1  4 SQSKLSQDQLQELVRSTRFDKKELQQWYKgfFKDC-PSGNLNKEEFQKIYKLFF 56
                6789********************99886223444.469999999999999888 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00032
   EF-hand_4 46 ekiwdladidedgkldfeefciamrl 71
                e ++++ d d++g++df+ef+ a+ +
  EPX72771.1 66 EYVFNVFDTDKNGTIDFKEFICALSV 91
                5688999*************999865 PP

  == domain 3  score: 9.5 bits;  conditional E-value: 0.00064
   EF-hand_4  42 edklekiwdladidedgkldfeefciamrlifdlvngeikdv 83 
                 +dkl   ++l d+d++g + ++e+  ++  i+ +v     ++
  EPX72771.1  98 DDKLVWAFQLYDLDNNGLISYNEMLQIVDAIYKMVGSM-VKL 138
                 688888999************************99654.444 PP

  == domain 4  score: 9.0 bits;  conditional E-value: 0.00096
   EF-hand_4  41 eedklekiwdladidedgkldfeef 65 
                 +e++++ki+++ d ++dg+l++eef
  EPX72771.1 145 PEKRVNKIFSMMDKNKDGQLNLEEF 169
                 57899*******************9 PP

>> EF-hand_9  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0       1.2   1.6e+03      36      61 ..      26      51 ..      11      55 .. 0.70
   2 !   14.4   0.1   2.5e-05     0.035       2      54 ..      67     117 ..      66     129 .. 0.78
   3 ?    5.3   0.0     0.018        25       4      59 ..     105     170 ..     102     172 .. 0.60

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 1.2
   EF-hand_9 36 eLeelakelDPdgedasvdldtflrv 61
                eL++++k +  d   + ++++ f+++
  EPX72771.1 26 ELQQWYKGFFKDCPSGNLNKEEFQKI 51
                78888887754444555888888776 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 2.5e-05
   EF-hand_9   2 tvFevcDtqktGrVpvsrlidyLravtaqdpeeseLeelakelDPdgedasvd 54 
                  vF+v+Dt+k G++  ++ i  L  +    + + +L    +++D d++ +++ 
  EPX72771.1  67 YVFNVFDTDKNGTIDFKEFICALSVTSR-GTLDDKLVWAFQLYDLDNN-GLIS 117
                 68********************976555.8888888777777777776.5555 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.018
   EF-hand_9   4 FevcDtqktGrVpvsrlidyL....ravtaq.......dpeeseLeelakelDPdgedasvdldtfl 59 
                 F+++D +  G +   +++++     + v++        d++e ++++  +++D +++d++++l+ f 
  EPX72771.1 105 FQLYDLDNNGLISYNEMLQIVdaiyKMVGSMvklpedeDTPEKRVNKIFSMMD-KNKDGQLNLEEFR 170
                 66666666666654443333211114444434433444777889999999999.6677999999985 PP

>> SPARC_Ca_bdg  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.2     0.027        37      69     111 ..      41      86 ..       3      88 .. 0.66
   2 !   10.5   0.3   0.00042      0.58      53     110 ..      98     169 ..      90     172 .. 0.70

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.027
  SPARC_Ca_bdg  69 kvlsksELaplraplvkleh...CikpflescDadkdkkislkEwc 111
                   + l+k+E +++++ + ++       +  ++  D+dk+++i+ kE++
    EPX72771.1  41 GNLNKEEFQKIYKLFFPFGDpsaFAEYVFNVFDTDKNGTIDFKEFI 86 
                   5566667666666555554311134556888899999999999985 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00042
  SPARC_Ca_bdg  53 kepvawkFsklDtnsdkvlsksELaplraplvkl..............ehCikpflescDadkdkkislkEw 110
                    +++ w F+  D ++++++s +E+ ++   + k+              e+ +++ ++  D +kd++++l+E+
    EPX72771.1  98 DDKLVWAFQLYDLDNNGLISYNEMLQIVDAIYKMvgsmvklpededtpEKRVNKIFSMMDKNKDGQLNLEEF 169
                   67899****************999888776655523333334433333666777777777777777777777 PP

>> S10_plectin  Plectin/S10 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   1.7e-05     0.024       3      83 ..      45     127 ..      43     132 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.7e-05
                  HCHHHHHHHHCCC..CSCEEEE--SS----SSS---HHHHHHHHHHCCCCTSEEEEEETTEEEEEE-HHHHHHHHHHHXXXXS CS
  S10_plectin   3 kknrkaiyeylfk..egvlvakkdfelkkheelnvpnlqvikalqSLksrgyvkeqfaWrhyYytLtneGieylreylhlpee 83 
                  k++ ++iy+ +f   +   +a+  f++  +++ +  +++ + +  S +srg ++ + +W +  y L n+G+    e+l++ + 
   EPX72771.1  45 KEEFQKIYKLFFPfgDPSAFAEYVFNVFDTDKNGTIDFKEFICALSVTSRGTLDDKLVWAFQLYDLDNNGLISYNEMLQIVDA 127
                  677788888765411556777778887777777666777777888*************************9999999988765 PP

>> EF-hand_10  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.4     0.016        22       1      49 [.       7      54 ..       7      55 .. 0.70
   2 ?    2.7   0.1     0.082   1.1e+02      22      43 ..      64      85 ..      62      87 .. 0.90
   3 ?    5.7   0.0    0.0099        14      24      45 ..     150     171 ..     145     174 .. 0.90

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.016
  EF-hand_10  1 kmsfkEvkrlLreiNievd..deYAekLFkkcDkSksgrLegeEieeFykl 49
                k+s++ +++l r    + +  +++ +  Fk c    sg L+ eE+++ ykl
  EPX72771.1  7 KLSQDQLQELVRSTRFDKKelQQWYKGFFKDC---PSGNLNKEEFQKIYKL 54
                66777777777776665442235557899999...5899*******99986 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.082
  EF-hand_10 22 YAekLFkkcDkSksgrLegeEi 43
                +Ae +F   D+ k+g+++ +E+
  EPX72771.1 64 FAEYVFNVFDTDKNGTIDFKEF 85
                7999*************99886 PP

  == domain 3  score: 5.7 bits;  conditional E-value: 0.0099
  EF-hand_10  24 ekLFkkcDkSksgrLegeEiee 45 
                 +k+F   Dk k+g+L+ eE+ e
  EPX72771.1 150 NKIFSMMDKNKDGQLNLEEFRE 171
                 589****************975 PP

>> DUF1679  Protein of unknown function (DUF1679)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.2    0.0027       3.8     329     366 ..      25      59 ..      13      85 .. 0.87
   2 ?    4.7   0.0    0.0083        11     169     199 ..     116     146 ..     106     182 .. 0.75

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0027
     DUF1679 329 elLeqyyetflkaledngeepytleqLkdsYklyfplm 366
                 + L+q+y+ f k +    +   + e+ ++ Ykl+fp +
  EPX72771.1  25 KELQQWYKGFFKDC---PSGNLNKEEFQKIYKLFFPFG 59 
                 569***********...3557899************86 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.0083
     DUF1679 169 ikadelipvlkaiAtlqalslslseeekksa 199
                 i+ +e++++++ai ++    ++l+e+e +  
  EPX72771.1 116 ISYNEMLQIVDAIYKMVGSMVKLPEDEDTPE 146
                 7899********************9997654 PP

>> Pan3_PK  Pan3 Pseudokinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.2   9.2e-05      0.13      73     136 ..      64     130 ..      62     132 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 9.2e-05
     Pan3_PK  73 FrdyvFhqvdeegkpvldlahvlscLnklDagv.eekilLvsr..deqsvlvvsYkelkkllesafe 136
                 F +yvF+  d++ + ++d++  + +L+    g+ ++k++   +  d ++  ++sY+e+ +++++ ++
  EPX72771.1  64 FAEYVFNVFDTDKNGTIDFKEFICALSVTSRGTlDDKLVWAFQlyDLDNNGLISYNEMLQIVDAIYK 130
                 99*************************99998746676544322377888899*********99987 PP

>> Pam16  Pam16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.6      0.14     2e+02      80      93 ..      66      79 ..      37      87 .. 0.66
   2 ?    6.2   0.1    0.0069       9.5      69      96 ..     139     166 ..     110     171 .. 0.69

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.14
                HHHHHHT-CCCTS- CS
       Pam16 80 ehlfevndkskGGs 93
                e++f+v d +k G+
  EPX72771.1 66 EYVFNVFDTDKNGT 79
                56666666666666 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.0069
                 --SHHHHHHHHHHHHHHT-CCCTS-HHH CS
       Pam16  69 dlnreevekryehlfevndkskGGslyl 96 
                 + +++  ekr + +f + dk+k G l l
  EPX72771.1 139 PEDEDTPEKRVNKIFSMMDKNKDGQLNL 166
                 55667789****************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       762  (0.042501); expected 358.6 (0.02)
Passed bias filter:                      595  (0.0331865); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.51u 0.29s 00:00:00.80 Elapsed: 00:00:00.45
# Mc/sec: 1258.01
//
Query:       EPX72772.1  [L=416]
Description: tRNA pseudouridylate synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.3e-30  106.6   0.0    1.9e-30  106.1   0.0    1.3  1  PseudoU_synth_2  RNA pseudouridylate synthase
     0.0081   16.3   0.0      0.019   15.1   0.0    1.6  1  Auto_anti-p27    Sjogren's syndrome/scleroderma autoantigen 1


Domain annotation for each model (and alignments):
>> PseudoU_synth_2  RNA pseudouridylate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.1   0.0   2.1e-34   1.9e-30       2     159 ..     136     282 ..     135     283 .. 0.93

  Alignments for each domain:
  == domain 1  score: 106.1 bits;  conditional E-value: 2.1e-34
  PseudoU_synth_2   2 lvvvnKPagvpvqpeakdgsekekettatssraeeekkelklvhRLDkatsGllllAksseaanklakafeerkvrKkYlalvfgapeeeegai 95 
                      +vv++KPagvpv+p++      ++ t+     +e++   l++++RLD+ tsGl+ ++k+++aa++++  + +++++K+Y+a v+ ++ ++ ++i
       EPX72772.1 136 FVVIDKPAGVPVHPTG----RYNHNTVLHILMKENKCPFLYPCNRLDRLTSGLMFFSKTPKAAEEMRVYMISKSLKKEYIARVV-GEFPADKEI 224
                      89**************....6666677777888888899********************************************8.888888888 PP

  PseudoU_synth_2  96 kkkiskdtekqegarrkaeeldgkkavtylkvlksgsseksakvslveleletGrkhQiRvhla 159
                        +     + + +  +++ + dgk+avt+++ ++ +     +++slv +++ tGr+hQ+Rvhl+
       EPX72772.1 225 TCDARL-LTVAPTLGLNRVHPDGKEAVTVFRRIAFD-----GNTSLVHCKPLTGRTHQLRVHLQ 282
                      877777.78999************************.....*********************97 PP

>> Auto_anti-p27  Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   2.2e-06     0.019      12      29 ..     356     373 ..     352     378 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 2.2e-06
  Auto_anti-p27  12 tMLaetCpvCgvPLmrdr 29 
                     +++e+C+vCg+PL  d+
     EPX72772.1 356 LLTGEHCEVCGSPLYTDP 373
                    699***********9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (416 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       475  (0.0264934); expected 358.6 (0.02)
Passed bias filter:                      452  (0.0252106); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2963.41
//
Query:       EPX72773.1  [L=481]
Description: XP-G family nuclease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-15   56.5   0.1    1.3e-14   54.4   0.0    2.2  2  XPG_N       XPG N-terminal domain
    2.1e-13   50.4   0.0    6.7e-13   48.8   0.0    1.9  1  XPG_I       XPG I-region
     0.0091   16.6   0.1      0.071   13.7   0.0    2.5  2  5_3_exonuc  5'-3' exonuclease, C-terminal SAM fold


Domain annotation for each model (and alignments):
>> XPG_N  XPG N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.4   0.0   2.2e-18   1.3e-14       1      98 [.       1     100 [.       1     103 [. 0.96
   2 ?   -3.3   0.0       2.1   1.3e+04      54      78 ..     449     471 ..     434     473 .. 0.57

  Alignments for each domain:
  == domain 1  score: 54.4 bits;  conditional E-value: 2.2e-18
                 X--TTHHHHHHHH-..GEEEEEGGGGTT..EEEEEEHHHHHHHHHHHSE.ETTEE-BS-HHHHHHHHHHHHHHHTTEEEEEEE--S--.GGGHHHHHHH CS
       XPG_N   1 MGikgLlkllkeva..airsvsiealeg..kklaiDaslwlyrfliavreqlgnalentshlmglfsrllrlldfgikPifVFdgkap.dlkkeelekr 94 
                 MG++gLl++l+ va  +i+s++  +++   +++aiD+ l+l r +++  + l  + ++   +++++ r++r    +i Pi+VFd+  p + k+ee+ekr
  EPX72773.1   1 MGVQGLLPMLRRVApeSIQSIAASSFSSlfPVVAIDGTLLLIRNFRSQYTALNYSFNH-FKWAFKLARYCR--RQKIMPIVVFDNPIPnEHKAEEHEKR 96 
                 ****************************99*******************999999999.99**********..99***********9989********* PP

                 HHHH CS
       XPG_N  95 serr 98 
                 +  +
  EPX72773.1  97 KLLK 100
                 9765 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 2.1
                 S-HHHHHHHHHHHHHHHTTEEEEEE CS
       XPG_N  54 ntshlmglfsrllrlldfgikPifV 78 
                 ++ +   l++++l+   f+ +P fV
  EPX72773.1 449 SDTYYLDLERQALK--VFNLQPDFV 471
                 34555566666655..788888776 PP

>> XPG_I  XPG I-region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.8   0.0   1.1e-16   6.7e-13       2      94 .]     284     372 ..     283     372 .. 0.94

  Alignments for each domain:
  == domain 1  score: 48.8 bits;  conditional E-value: 1.1e-16
                 HHT--EEE-S..S-HHHHHHHHHHTTSSSEEE-SSSHHHHTT-SEEEESTT.ECECTT..EEECEEEEEEHHHHHHHHT--HHHHHHHHHHHCET CS
       XPG_I   2 lmgipyvvAp..gEAEAqcayLqkkglvdaviseDsDlllFGapkvlrnlskkkskkkkekekkkvevidlekvlkelgltreqlidlaillgcD 94 
                  ++ip+  Ap  +EAEA ++++ kk+l+ +v+++D+D+l++Gap+v   l   +s+       + +++++  ++++ l+++  q++ +++++g+D
  EPX72773.1 284 ILNIPVTYAPiaVEAEAFASAIYKKNLATVVATQDTDTLALGAPMVSDFLD--NSQLF----YHFLTYVNPMRICDSLNISYRQFQIYCLMCGTD 372
                 689*******888************************************97..65666....689*****************************9 PP

>> 5_3_exonuc  5'-3' exonuclease, C-terminal SAM fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1      0.57   3.4e+03      54      64 ..     183     193 ..     142     226 .. 0.55
   2 !   13.7   0.0   1.2e-05     0.071      23      56 ..     377     410 ..     371     456 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.57
  5_3_exonuc  54 kklkekLeenk 64 
                 +++ +kL+++k
  EPX72773.1 183 NSIDKKLKQKK 193
                 33444444444 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 1.2e-05
  5_3_exonuc  23 vpgiGektAakLlkeygsleeilenldelkekkl 56 
                 +p+iG+  A +L++e+ ++ +il++l+  ++ ++
  EPX72773.1 377 IPKIGPVRALELIQEHRDVSSILSHLSLSNKFNV 410
                 89**********************9973233222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (481 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       845  (0.0471303); expected 358.6 (0.02)
Passed bias filter:                      524  (0.0292264); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.29s 00:00:00.86 Elapsed: 00:00:00.48
# Mc/sec: 3026.03
//
Query:       EPX72774.1  [L=477]
Description: Sad1 interacting factor 3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-48  165.7   0.0    1.7e-48  165.0   0.0    1.4  1  DUF155    Uncharacterised ACR, YagE family COG1723
  ------ inclusion threshold ------
      0.095   12.8   1.8        0.2   11.8   1.8    1.4  1  SecG      Preprotein translocase SecG subunit


Domain annotation for each model (and alignments):
>> DUF155  Uncharacterised ACR, YagE family COG1723
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.0   0.0   1.9e-52   1.7e-48       1     176 []     245     424 ..     245     424 .. 0.97

  Alignments for each domain:
  == domain 1  score: 165.0 bits;  conditional E-value: 1.9e-52
      DUF155   1 vfiFknGsvVfwgldeeeeknflnkllkflnees...elpreeeqeteeleyvydeqsessrikgdvivlkskslleklaiShalaqSvkLdvlEesld 96 
                 +f+F++G++Vfw+++  +ek++l++l+ +  e+s   ++  eee e e+l++ y+++++++ri++d+i++ s ++  kl++ShalaqSvkL+ +E ++d
  EPX72774.1 245 IFVFSYGVIVFWNFSLGQEKDILADLTFAGGENSlmiKPLAEEECEVEDLHFHYAPHTKRPRIYNDMIHIPSADIKMKLVMSHALAQSVKLSRFELRTD 343
                 7**************************9999999*99999999999************************8888************************* PP

      DUF155  97 ellestekipkelakkgklklsrkellkktgellslrinlnlkselldtPdffWee.peleslyeavseyleikeRikiLn 176
                  +++s   +pk+la  g+l lsr e+++  g l++lr ++nl s++ldtP+f+W++ p l +ly+a +eylei++R+++Ln
  EPX72774.1 344 VTMNSALIFPKKLALYGHLGLSRAEVIRMSGHLFQLRVDVNLISNVLDTPEFLWDSePLLLPLYTAFREYLEIGPRTNVLN 424
                 ******************************************************655***********************9 PP

>> SecG  Preprotein translocase SecG subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   1.8   2.2e-05       0.2      38      68 ..     435     465 ..     429     466 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.2e-05
                 SS--SSCCCHHCCHHHHHHHHHHHHHHHHHH CS
        SecG  38 slfgsrgaekfLtkiTvilavlFfvlslvla 68 
                 ++fg+++a+k+++ iT+i+ +l  +  +v +
  EPX72774.1 435 DIFGKSSADKKMNSITWIIIILITLFMIVFM 465
                 589******************9999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (477 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       838  (0.0467399); expected 358.6 (0.02)
Passed bias filter:                      534  (0.0297841); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.28s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 3175.71
//
Query:       EPX72775.1  [L=512]
Description: WD repeat protein Pfs2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.8e-37  125.6  15.9    7.6e-07   29.7   0.0    7.4  7  WD40         WD domain, G-beta repeat
    2.2e-16   59.9   0.3      0.034   14.4   0.1    6.6  6  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    7.8e-07   29.2   0.2       0.14   12.0   0.0    3.4  3  eIF2A        Eukaryotic translation initiation factor eIF2A
    0.00043   19.3   0.1      0.049   12.6   0.0    3.4  4  Ge1_WD40     WD40 region of Ge1, enhancer of mRNA-decapping p
     0.0043   16.4   0.0       0.99    8.7   0.0    2.2  2  WD40_like    WD40-like domain
  ------ inclusion threshold ------
      0.019   14.9   0.9         25    5.0   0.0    3.6  3  PD40         WD40-like Beta Propeller Repeat


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.1    0.0051        15      12      38 .]      80     109 ..      68     109 .. 0.75
   2 !   14.7   0.0   1.4e-05     0.041       9      35 ..     121     148 ..     113     151 .. 0.78
   3 !   29.7   0.0   2.5e-10   7.6e-07       2      38 .]     155     192 ..     154     192 .. 0.93
   4 !   28.4   0.4   6.8e-10     2e-06       5      38 .]     200     234 ..     197     234 .. 0.91
   5 !   14.1   0.0   2.3e-05     0.067       2      38 .]     239     278 ..     238     278 .. 0.84
   6 !   20.4   0.4   2.3e-07    0.0007       4      35 ..     285     318 ..     282     321 .. 0.78
   7 !   16.7   0.0   3.3e-06    0.0099       9      38 .]     358     388 ..     351     388 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0051
                 S...EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  12 s...vtslafspdgawlasGsdDgtvriWd 38 
                     ++ +++ pdg+ l++Gs  g   +W+
  EPX72775.1  80 ArhvINVVRWTPDGRRLLTGSSTGEFTLWN 109
                 255568899***********8788777776 PP

  == domain 2  score: 14.7 bits;  conditional E-value: 1.4e-05
                 SSSS..EEEEEEETTSSEEEEEETTSEEE CS
        WD40   9 GHss..vtslafspdgawlasGsdDgtvr 35 
                  H +  v++  +s+dg+wl+sG+  g ++
  EPX72775.1 121 SH-DyaVRCAEWSSDGRWLISGDGGGIIK 148
                 57.346**************995466665 PP

  == domain 3  score: 29.7 bits;  conditional E-value: 2.5e-10
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +++++l +H   ++++afsp+ + ++++sdDg+++iW+
  EPX72775.1 155 NNVKILQAHeMEIRDVAFSPNDSKFVTASDDGSLKIWN 192
                 68999****666*************************8 PP

  == domain 4  score: 28.4 bits;  conditional E-value: 6.8e-10
                 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++ltGH  +v  ++++p++ +lasGs+D+ v++Wd
  EPX72775.1 200 QKLTGHgWDVKTVDWHPSKGLLASGSKDNLVKFWD 234
                 5799**555*************************9 PP

  == domain 5  score: 14.1 bits;  conditional E-value: 2.3e-05
                 EEEEEEESS.SSE..EEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssv..tslafspdgawlasGsdDgtvriWd 38 
                 +cl tl GH + +   s++    +++la+ s+D t+ri+d
  EPX72775.1 239 SCLATLHGHkNTImqASFQKGFGNNYLATVSRDSTCRIFD 278
                 69*******88895446667778899************98 PP

  == domain 6  score: 20.4 bits;  conditional E-value: 2.3e-07
                 EEEEESS.SSEEEEEEETTSSE.EEEEETTSEEE CS
        WD40   4 lrtltGH.ssvtslafspdgaw.lasGsdDgtvr 35 
                 +r+l+GH ++++++ ++p +   l++G+ Dg+v 
  EPX72775.1 285 IRVLRGHeKDINCVTWHPIHGNlLTTGGSDGSVN 318
                 799***********866666663568877***96 PP

  == domain 7  score: 16.7 bits;  conditional E-value: 3.3e-06
                 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +H  +++s++++p g++l++Gs D+t r+W+
  EPX72775.1 358 AHeLGIWSMQYHPLGHLLCTGSNDKTTRFWS 388
                 78666*************************5 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.0    0.0012       3.6      33      65 ..      76     108 ..      34     114 .. 0.76
   2 !    7.6   0.0    0.0015       4.6      33      66 ..     118     151 ..     108     161 .. 0.86
   3 !    7.1   0.0    0.0022       6.4      35      67 ..     161     193 ..     152     203 .. 0.85
   4 !   14.4   0.1   1.1e-05     0.034      33      86 ..     201     253 ..     189     259 .. 0.79
   5 !   10.6   0.0   0.00018      0.52      23      80 ..     270     335 ..     262     347 .. 0.70
   6 ?    4.5   0.0     0.014        42      38      66 ..     360     388 ..     352     393 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0012
  ANAPC4_WD40  33 eedkedsevrsLaWkpdgklLavaysdgevrll 65 
                  +++k  + ++ ++W pdg+ L  + s ge  l 
   EPX72775.1  76 SANKARHVINVVRWTPDGRRLLTGSSTGEFTLW 108
                  45667778899*****************98875 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0015
  ANAPC4_WD40  33 eedkedsevrsLaWkpdgklLavaysdgevrlld 66 
                   ++++d  vr+ +W+ dg+ L  +   g ++ ++
   EPX72775.1 118 INQSHDYAVRCAEWSSDGRWLISGDGGGIIKYFE 151
                  5788999******************999998765 PP

  == domain 3  score: 7.1 bits;  conditional E-value: 0.0022
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrllda 67 
                  ++++ e+r++a++p+++ ++ a +dg++++ + 
   EPX72775.1 161 QAHEMEIRDVAFSPNDSKFVTASDDGSLKIWNF 193
                  45889************************9875 PP

  == domain 4  score: 14.4 bits;  conditional E-value: 1.1e-05
  ANAPC4_WD40  33 eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtc 86 
                  + ++++  v+ + W+p+  lLa + +d+ v++ d  ++ ++ +l+ +++ +++ 
   EPX72775.1 201 KLTGHGWDVKTVDWHPSKGLLASGSKDNLVKFWDPRTASCLATLHGHKN-TIMQ 253
                  44577889*********************************99988877.4655 PP

  == domain 5  score: 10.6 bits;  conditional E-value: 0.00018
  ANAPC4_WD40  23 Rlngqrvwtl.......eedkedsevrsLaWkp.dgklLavaysdgevrlldaesgkvvhslsvks 80 
                  R +  r+++l          ++++ ++++ W+p  g+lL  + sdg+v+ ++  +  v ++ + ++
   EPX72775.1 270 RDSTCRIFDLrvmkdirVLRGHEKDINCVTWHPiHGNLLTTGGSDGSVNHYSLDEPPVYSQQKHHE 335
                  444444444444444443467888999999998679999999999999999888777776666655 PP

  == domain 6  score: 4.5 bits;  conditional E-value: 0.014
  ANAPC4_WD40  38 dsevrsLaWkpdgklLavaysdgevrlld 66 
                  +  + s++++p g+lL+ + +d + r+ +
   EPX72775.1 360 ELGIWSMQYHPLGHLLCTGSNDKTTRFWS 388
                  567889****************9988765 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   0.0   4.8e-05      0.14     100     159 ..      81     139 ..      62     142 .. 0.83
   2 !   10.3   0.1   0.00015      0.46      57     149 ..     162     252 ..     146     271 .. 0.80
   3 ?    2.8   0.0     0.031        92      84     142 ..     273     332 ..     268     347 .. 0.62

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 4.8e-05
                 EES--EEEE-TTSSEEEEE-TTSSS-EEEEEETT..TTEEEEEEE-TT--EEEE-TTSSEEE CS
       eIF2A 100 eqkrNtiffspkgklvllaGfgnlaGeleiwdvk..kkkkiakaeaanatlvewspdgryvl 159
                 ++  N + + p g+ +l++   +  Ge  +w+    +++ i++ + +     ews dgr+++
  EPX72775.1  81 RHVINVVRWTPDGRRLLTG---SSTGEFTLWNGLtfNFELINQSHDYAVRCAEWSSDGRWLI 139
                 45579***********986...678*******88778999999999988899*******986 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00015
                 ESSS.EEEEEE-TTSS-EEEEESSSSCEEEEEECSCEEEEEEEEE.S--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-TT--EE CS
       eIF2A  57 kkegpihdvaWspkskefaviyGkmpakvslfdlkvkviskleeq.krNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakaeaanatlv 149
                  +e +i dva sp+ ++f+    +   k+  f++ v+  + +++     t+ ++p+  l++ +   nl   +++wd  + +++a+++  + t +
  EPX72775.1 162 AHEMEIRDVAFSPNDSKFVTASDDGSLKIWNFQMSVEEQKLTGHGwDVKTVDWHPSKGLLASGSKDNL---VKFWDPRTASCLATLHGHKNTIM 252
                 34557*************9999998889999999887766665542789*******************...*******9999999987766665 PP

  == domain 3  score: 2.8 bits;  conditional E-value: 0.031
                 EEEEEECS.CEE..EEEEEEES--EEEE-T.TSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE CS
       eIF2A  84 kvslfdlk.vkv..iskleeqkrNtiffsp.kgklvllaGfgnlaGeleiwdvkkkkkiakae 142
                 +  +fdl+ +k   + + +e+  N++ ++p +g+l+ ++G     G+++ +  ++   +++++
  EPX72775.1 273 TCRIFDLRvMKDirVLRGHEKDINCVTWHPiHGNLLTTGG---SDGSVNHYSLDEPPVYSQQK 332
                 5567777632331134446777899999885677777766...34666666666555555554 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0     0.028        83     182     220 ..     118     156 ..     106     159 .. 0.84
   2 !   12.6   0.0   1.6e-05     0.049     185     230 ..     162     207 ..     151     219 .. 0.84
   3 ?   -0.8   0.0      0.19   5.8e+02     264     284 ..     225     245 ..     209     261 .. 0.67
   4 ?   -0.0   0.0      0.11   3.4e+02     184     220 ..     244     283 ..     223     311 .. 0.56

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.028
    Ge1_WD40 182 lkieehsliveaafspdGtalatasedGevkffqvyled 220
                 ++ +++  + +a +s+dG  l      G++k+f  +l++
  EPX72775.1 118 INQSHDYAVRCAEWSSDGRWLISGDGGGIIKYFEPNLNN 156
                 5555666899*************999*******987766 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 1.6e-05
    Ge1_WD40 185 eehsliveaafspdGtalatasedGevkffqvyledeeeprCLheW 230
                  ++ +i + afsp+     tas dG +k +   ++ ee++   h W
  EPX72775.1 162 AHEMEIRDVAFSPNDSKFVTASDDGSLKIWNFQMSVEEQKLTGHGW 207
                 34459**************************999999998888988 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 0.19
    Ge1_WD40 264 dnnselklWscelWtClqtik 284
                 ++++ +k W   + +Cl t++
  EPX72775.1 225 SKDNLVKFWDPRTASCLATLH 245
                 344456777777777777776 PP

  == domain 4  score: -0.0 bits;  conditional E-value: 0.11
    Ge1_WD40 184 ieehs.liveaafspd.G.talatasedGevkffqvyled 220
                 ++ h  +i++a+f    G   lat s d + + f + +++
  EPX72775.1 244 LHGHKnTIMQASFQKGfGnNYLATVSRDSTCRIFDLRVMK 283
                 3444336666666543221457777777777777665554 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.6   0.0    0.0029       8.5      80     131 ..     121     174 ..      84     203 .. 0.72
   2 !    8.7   0.0   0.00033      0.99       3     110 ..     209     323 ..     207     355 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0029
   WD40_like  80 kieedistvkvi.ddklli.GtnkGsiyvfskdlqleevllgqsseIkeikien 131
                 + + ++ +++   d++ li G   G i +f+ +l+++++l  ++ eI+++  + 
  EPX72775.1 121 SHDYAVRCAEWSsDGRWLIsGDGGGIIKYFEPNLNNVKILQAHEMEIRDVAFSP 174
                 555555555543134445515556677889*******************98764 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00033
   WD40_like   3 iYsidiskkgslilyGgkddkctvlkleslesvsivesfedSvi...fvklldddlilvvtlDGtillslleneeeven.ekieedistvk...viddk 94 
                 + ++d  +   l++ G+kd+ ++  + ++      +++ ++ ++   f k   ++ +  v+ D t    +l+  + ++  +  e di +v+   + ++ 
  EPX72775.1 209 VKTVDWHPSKGLLASGSKDNLVKFWDPRTASCLATLHGHKNTIMqasFQKGFGNNYLATVSRDSTCRIFDLRVMKDIRVlRGHEKDINCVTwhpIHGNL 307
                 5578998888999******************************9555677788999999******9999999999887625678899998733246788 PP

   WD40_like  95 lliGtnkGsiyvfskd 110
                 l  G++ Gs+  +s d
  EPX72775.1 308 LTTGGSDGSVNHYSLD 323
                 999**********999 PP

>> PD40  WD40-like Beta Propeller Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0    0.0084        25      15      23 ..      88      96 ..      87      97 .. 0.90
   2 ?    4.4   0.0     0.012        36      16      24 ..     131     139 ..     128     139 .. 0.93
   3 ?    1.4   0.1      0.11   3.2e+02      14      37 ..     170     191 ..     166     192 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.0084
                EE-TTSSEE CS
        PD40 15 sfSPDGkrl 23
                +++PDG+rl
  EPX72775.1 88 RWTPDGRRL 96
                7******98 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.012
                 E-TTSSEEE CS
        PD40  16 fSPDGkrla 24 
                 +S DG++l+
  EPX72775.1 131 WSSDGRWLI 139
                 *******96 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.11
                 EEE-TTSSEEEEEEECT.TCEEEE CS
        PD40  14 PsfSPDGkrlaFsSdRgsGkpdIy 37 
                  +fSP+ ++++ +Sd + G+  I+
  EPX72775.1 170 VAFSPNDSKFVTASD-D-GSLKIW 191
                 589******999999.7.999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (512 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       463  (0.0258241); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.43
# Mc/sec: 3603.21
//
Query:       EPX72776.1  [L=328]
Description: NST UDP-galactose transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-10   40.7   0.6    1.6e-10   40.7   0.6    1.7  2  Nuc_sug_transp  Nucleotide-sugar transporter
    1.8e-05   24.3   0.8    1.8e-05   24.3   0.8    2.1  2  TPT             Triose-phosphate Transporter family
    0.00086   19.5   8.1    0.00086   19.5   8.1    2.7  2  EamA            EamA-like transporter family
     0.0047   17.0   1.8      0.015   15.3   1.8    2.0  1  TMEM234         Putative transmembrane family 234
  ------ inclusion threshold ------
       0.91    9.8  10.7        5.8    7.2   2.7    2.8  2  TrbC            TrbC/VIRB2 family
        1.5    8.2  17.2        0.6    9.5  14.1    1.9  2  DUF373          Domain of unknown function (DUF373)


Domain annotation for each model (and alignments):
>> Nuc_sug_transp  Nucleotide-sugar transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.7   0.6   5.3e-14   1.6e-10      17     184 ..      15     171 ..       2     181 .. 0.82
   2 ?   -1.8   0.4      0.45   1.4e+03     126     152 ..     290     316 ..     249     319 .. 0.66

  Alignments for each domain:
  == domain 1  score: 40.7 bits;  conditional E-value: 5.3e-14
  Nuc_sug_transp  17 naslvltlrYartkedkerylsttavlla.eilklvvclllllkeekskvkkllrelkkeilakpkdtlklavPsliYtvqnnllyvalsnLdaa 110
                       + ++  +Y  t  ++   ++++a++ + +i+    cl   +   +++ +   ++l+k  l+   + + la+P+++ +    l+ v+l    a+
      EPX72776.1  15 GVANTILSKYQDTIAEDAGPVKSMAIFQSlNIFLGEACLWFYVFYRRYSRRSDYESLEKLTLK---EKAALALPAIMDISGSTLMNVGLLFTSAS 106
                     445566778888887777788888887543777778888888888888888889999998887...8899************************* PP

  Nuc_sug_transp 111 tyqvtyqlkilttalfsvllLkrklskkqWlslllLvaGvalvqlkqkeseesekaaaaakeensvlGliavla 184
                     +yq+t    il  alfs+++Lk  + ++qWlsl+++v+Gvalv ++  +++         + +n+ lG++avl+
      EPX72776.1 107 IYQMTRGSLILFVALFSITFLKSYIGRHQWLSLTFVVLGVALVGYSGFTAN---------VGSNPTLGISAVLI 171
                     ********************************************9877663.........34567777777775 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.45
  Nuc_sug_transp 126 fsvllLkrklskkqWlslllLvaGval 152
                     +++l+   +++  q++  +lL+ G+a 
      EPX72776.1 290 IALLFGMESFHLLQFTGFVLLIYGIAT 316
                     334444678888899999999999885 PP

>> TPT  Triose-phosphate Transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.3   0.8   5.9e-09   1.8e-05      51     136 ..      65     150 ..      36     170 .. 0.86
   2 ?   -0.6   0.6      0.22   6.6e+02     256     266 ..     283     293 ..     229     318 .. 0.40

  Alignments for each domain:
  == domain 1  score: 24.3 bits;  conditional E-value: 5.9e-09
         TPT  51 alglkkrpkisseflkailplalvktlghvlavvslskvaVSfthtvKasePiFtvilsrlllgeklsllvylsLlpivgGvalas 136
                 ++++++  k++ +  +a+   a++ + g+ l +v l  ++ S  ++ + s  +F +++s+ +l+ ++    +lsL  +v Gval  
  EPX72776.1  65 RSDYESLEKLTLKEKAALALPAIMDISGSTLMNVGLLFTSASIYQMTRGSLILFVALFSITFLKSYIGRHQWLSLTFVVLGVALVG 150
                 44667789999999999999**************************************************************9975 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.22
         TPT 256 rvvvIvlsvlv 266
                 r + I++  l+
  EPX72776.1 283 RTFGIWVIALL 293
                 22233333333 PP

>> EamA  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   8.1   2.9e-07   0.00086      56     135 ..      64     149 ..       9     151 .. 0.78
   2 ?    1.9  15.5     0.076   2.3e+02       3     133 ..     165     315 ..     163     317 .. 0.78

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 2.9e-07
        EamA  56 l.......aklslkdwllllllgllgtvlafllffyalkktsasnaslitslePvftlilsvlllgekltlkqllgivlillGvlli 135
                 +       +kl+lk+ ++l+l +++ +     l++ +l  tsas+  +      +f++++s+ +l+  ++  q+l++ +++lGv+l+
  EPX72776.1  64 RrsdyeslEKLTLKEKAALALPAIMDISG-STLMNVGLLFTSASIYQMTRGSLILFVALFSITFLKSYIGRHQWLSLTFVVLGVALV 149
                 34456666778888888888888777665.58*****************************************************98 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.076
        EamA   3 gillallaalfwaiyfvlskillrkv..spltltfvrfliagilllii...............allkegkl..aklslkdwlll.lllgllgtvlafll 81 
                 gi  +l++  f a+ f+l  ++l+++  +p +l+++  + + i++l+                + +++ ++  ++l+  ++l++  ++ l++++++++ 
  EPX72776.1 165 GISAVLIGQGFLAVQFTLEEYILSYIhvDPPELVAYEGTYGVIFVLLGmglsyyfvgsteagrYGWFDYSHvfSRLNELPILYFiSFVILISIAFFNVS 263
                 777778888888999999999988886678899999999999998666677877788888777444444444666666667777456666777777788 PP

        EamA  82 ffyalkktsasnaslitslePvftlilsvlllgekltlkqllgivlillGvl 133
                  ++  +  sa++ sl+       + +++ l+  e++ l+q+ g+vl + G++
  EPX72776.1 264 GLSITHIYSATTRSLLDIARTFGIWVIALLFGMESFHLLQFTGFVLLIYGIA 315
                 888888899999999999999999999999999*****************97 PP

>> TMEM234  Putative transmembrane family 234
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   1.8   4.9e-06     0.015      37     115 ..      72     149 ..       9     150 .. 0.89

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 4.9e-06
     TMEM234  37 elkflllrlkyliplllNqsgSvlfflllgkadlslavpiaNslafvfTvltelllgekvlkkktvlgmllvvvgialc 115
                 e+ +l  + + ++p ++  sgS l ++ l  ++ s+ ++   sl  +f +l + +  +  ++++++l +++vv+g+al+
  EPX72776.1  72 EKLTLKEKAALALPAIMDISGSTLMNVGLLFTSASIYQMTRGSLI-LFVALFSITFLKSYIGRHQWLSLTFVVLGVALV 149
                 555677788999***************************999995.6667778888889999***************98 PP

>> TrbC  TrbC/VIRB2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   1.1    0.0035        10      56      93 ..     116     153 ..      93     158 .. 0.73
   2 ?    7.2   2.7     0.002       5.8      15      87 ..     245     315 ..     236     317 .. 0.92

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0035
        TrbC  56 viatiaiivaGimlafgrlswrtlvmvviGiviifgAs 93 
                 ++ +  + ++ ++   gr +w +l  vv+G+++++ ++
  EPX72776.1 116 ILFVALFSITFLKSYIGRHQWLSLTFVVLGVALVGYSG 153
                 33444444555666677777**************9876 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.002
        TrbC  15 lalalvllllaspalAqaaggdpvetvlqnivdfltgplakviatiaiivaGimlafgrlswrtlvmvviGiv 87 
                 ++ ++ +++l s a+   +g ++++ +  + + +l   +a++ ++ +i+ +  m  f+ l++  +v ++ Gi+
  EPX72776.1 245 ILYFISFVILISIAFFNVSG-LSITHIYSATTRSLLD-IARTFGIWVIALLFGMESFHLLQFTGFVLLIYGIA 315
                 77899999********9998.****************.**************999999999999999999986 PP

>> DUF373  Domain of unknown function (DUF373)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1      0.41   1.2e+03     296     296 ..      74      74 ..       3     125 .. 0.44
   2 ?    9.5  14.1    0.0002       0.6     144     325 ..     127     308 ..     116     323 .. 0.70

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.41
      DUF373 296 l 296
                 l
  EPX72776.1  74 L 74 
                 1 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.0002
      DUF373 144 lkkalkdpelrktiLvplGlllliyalllllglpelalaiillllGlylllrGfgldelleelle..klkesleegritfvtyvvalll..lligiisg 238
                 lk ++   ++ ++++v+lG++l+ y+ ++    ++ +l+i ++l+G  +l   f l+e++ ++++    + + +eg+  ++++++++ l   ++g  ++
  EPX72776.1 127 LKSYIGRHQWLSLTFVVLGVALVGYSGFTANVGSNPTLGISAVLIGQGFLAVQFTLEEYILSYIHvdPPELVAYEGTYGVIFVLLGMGLsyYFVGSTEA 225
                 477777788999*****************86667899***********************999886678888899999999999888883333444333 PP

      DUF373 239 yislesvss.asvssglltlilafiygavewlalailtaslgkiideylkre..ekdiarllllpflvlaiglvlygasayllslsilal 325
                       + + ++v s+l +l + +  ++v ++ +a++ +s  +i++ y ++     d     ++  + +++ ++l+g+ ++ l + +  +
  EPX72776.1 226 GRY--GWFDySHVFSRLNELPILYFISFVILISIAFFNVSGLSITHIYSATTrsLLD-----IARTFGIWVIALLFGMESFHLLQFTGFV 308
                 333..3333445667777777778889999999999999999999999966522222.....3333344444444455555433222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       837  (0.0466841); expected 358.6 (0.02)
Passed bias filter:                      369  (0.0205812); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.55u 0.35s 00:00:00.90 Elapsed: 00:00:00.49
# Mc/sec: 2008.43
//
Query:       EPX72777.1  [L=676]
Description: poly(A) polymerase Cid14 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.2e-15   56.7   0.0      8e-15   54.9   0.0    2.1  1  NTP_transf_2  Nucleotidyltransferase domain
    3.6e-13   49.5   1.0    7.1e-13   48.6   0.1    2.1  2  PAP_assoc     Cid1 family poly A polymerase
    0.00015   21.8   1.9    0.00021   21.3   0.0    2.2  2  Polbeta       Polymerase beta, Nucleotidyltransferase
  ------ inclusion threshold ------
       0.28   10.7   1.5       0.66    9.5   1.5    1.5  1  EBV-NA3       Epstein-Barr virus nuclear antigen 3 (EBNA-3)


Domain annotation for each model (and alignments):
>> NTP_transf_2  Nucleotidyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.9   0.0   1.8e-18     8e-15       1      83 [.     259     362 ..     259     374 .. 0.90

  Alignments for each domain:
  == domain 1  score: 54.9 bits;  conditional E-value: 1.8e-18
                   HHHHHHHHHHHTTTSEEEEEHHHHCTTSCTTSSEEEEEEESTTCHHH...................HHHEHHHHHHHHCCCEEECTTEEEEEECEEE CS
  NTP_transf_2   1 lkklleelkelepvakvvlfGSyarGtalkgSDiDllvvlpeevsre...................kkeegleklaeiikfleellglevdlvtrek 78 
                   ++++++++ +++p+++v++fGS+++ ++l++SD+D ++ ++++++r                    + ++++ ++++iikf++++++++vd+++++ 
    EPX72777.1 259 ISRINNAVVKKWPDVSVYVFGSFETRLYLPTSDLDMVIMSSDSHYRGskkdmfvlahhlrkskvatDIQVITTANVPIIKFVDPITKIHVDVSFNQA 355
                   689*******************************************9*******************99999**********************9987 PP

                   CCC..CT CS
  NTP_transf_2  79 led..pl 83 
                    +   +l
    EPX72777.1 356 GGLktCL 362
                   6655455 PP

>> PAP_assoc  Cid1 family poly A polymerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.1       3.8   1.7e+04      29      52 ..     189     209 ..     187     210 .. 0.61
   2 !   48.6   0.1   1.6e-16   7.1e-13       1      62 []     427     485 ..     427     485 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 3.8
                 T-EEEHHHHCGCS-SSEECESSSS CS
   PAP_assoc  29 ggiltkkekgwesaeskernrfll 52 
                 g+++   +k+ e+   + r+r+++
  EPX72777.1 189 GRFFHEANKQNEQ---SSRKRKRM 209
                 6667777777774...55555555 PP

  == domain 2  score: 48.6 bits;  conditional E-value: 1.6e-16
                 -HHHHHHHHHHHHHHT--TTTEEEECSST-E.EEHHHHCGCS-SSEECESSSSEBEETTCCCC CS
   PAP_assoc   1 sLGeLLigFFeyYgreFdyenvvisirtggi.ltkkekgwesaeskernrfllaIeDPfeldn 62 
                 + G+LL++++e+Yg++F y+ v+i + +gg+ ++kk+ gw+    + ++++ll+I DP e +n
  EPX72777.1 427 NYGVLLLELLELYGKRFHYDAVGIAVHNGGFyFSKKKQGWL----RPNQPYLLSIMDPVEFSN 485
                 679*************************9999*********....799***********9987 PP

>> Polbeta  Polymerase beta, Nucleotidyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.0   4.7e-08   0.00021      15      72 ..     274     334 ..     261     345 .. 0.79
   2 ?   -2.1   0.6      0.92   4.1e+03      42      70 ..     583     618 ..     567     641 .. 0.58

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 4.7e-08
                 STTEEEEEE-S------EEEEEEEESS-...--HHHHHHHHHHHHHH.SSSEEEEEETTTS CS
     Polbeta  15 laylFGSrakgkareeSDiDlavllkek...ldleeelelaaelediklgkkvDlvdlnea 72 
                  +y+FGS+ +  + + SD+D+ ++ +++    ++++ + la+ l + k   ++ +++  ++
  EPX72777.1 274 SVYVFGSFETRLYLPTSDLDMVIMSSDShyrGSKKDMFVLAHHLRKSKVATDIQVITTANV 334
                 58**************************988788889999999999966555555554444 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.92
                 -......--HHHHHHHHHHHHHH..SSSEEEEEETT CS
     Polbeta  42 k......ldleeelelaaeledi.klgkkvDlvdln 70 
                 +      +d ++  e+++e +d+ k++   Dl++ n
  EPX72777.1 583 NvdlqfvEDESDSDEVEQETDDLiKKKGLNDLQNTN 618
                 333333333344555555555554444445555555 PP

>> EBV-NA3  Epstein-Barr virus nuclear antigen 3 (EBNA-3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   1.5   0.00015      0.66     197     231 ..     570     604 ..     563     609 .. 0.94

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00015
                 XXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
     EBV-NA3 197 qaqgiellrtegepvedatsetseesedveaesdd 231
                 q  +i++ r++ e+v+   +e++++s++ve e+dd
  EPX72777.1 570 QLSSIDVDRLPTENVDLQFVEDESDSDEVEQETDD 604
                 6789****************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (676 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1100  (0.0613531); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.67u 0.28s 00:00:00.95 Elapsed: 00:00:00.46
# Mc/sec: 4371.79
//
Query:       EPX72778.1  [L=181]
Description: GET complex subunit Get1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.5e-43  147.7   6.2    3.1e-43  147.4   6.2    1.0  1  CHD5             CHD5-like protein
  ------ inclusion threshold ------
      0.019   14.6   0.8      0.022   14.5   0.8    1.1  1  ThylakoidFormat  Thylakoid formation protein
      0.043   14.3   1.8          2    9.0   0.3    2.9  3  DUF1240          Protein of unknown function (DUF1240)
      0.058   13.6   4.9      0.081   13.2   4.9    1.2  1  MapZ_EC1         MapZ extracellular domain 1


Domain annotation for each model (and alignments):
>> CHD5  CHD5-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.4   6.2   6.8e-47   3.1e-43       3     158 ..      18     173 ..      16     174 .. 0.95

  Alignments for each domain:
  == domain 1  score: 147.4 bits;  conditional E-value: 6.8e-47
        CHD5   3 ifllvlvtkllntigkstiknllwllylkkvssksakeqrklkkellklkeelnsisaqDefAkWaKlnRkldkleeeleklkkelsaskssfkkklkk 101
                 ++ll l++++++ + k+ + n ++++yl  ++++++k++++  +ell+lk+eln +s+qDefAkWa+lnRk++kl++e+e++++ +++ +++fkk +++
  EPX72778.1  18 TILLSLFIHFFDKYFKEKTINGIYQVYLACSKNEELKKNKDIFRELLALKKELNRTSSQDEFAKWARLNRKYEKLNQEWEAQSNVVQKFQETFKKFVSI 116
                 577888888888777777777779*************************************************************************** PP

        CHD5 102 vllvlttvpqlvlkfwyrktpvfylpkgwfPllvewllslplaplgsVSltiWlfac 158
                 vl++lt+++++++++ ++k pvf lp  ++P+++ w+lslp+  +gsVSlt+W  a+
  EPX72778.1 117 VLWILTRGFRFYIQYKKSKAPVFFLPAFLLPSWALWFLSLPRSKYGSVSLTVWNYAV 173
                 *****************************************************9886 PP

>> ThylakoidFormat  Thylakoid formation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.8   4.9e-06     0.022      35     142 ..       4     116 ..       1     135 [. 0.71

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 4.9e-06
                      HHTSTTB---HHHHHHHHHHHHHHTTT-SSHHHHHHHHHHHHHHTT--HHHHHHHH.HGGGGGTT-.....BHHHHHHHHHTS---TTGGG... CS
  ThylakoidFormat  35 lsvnadFqydpifalGvvtvfdrlmegYkpeedkesifeAlckaveedpeqyreda.eeleelake....ksaeellsllkqeeeeeeaedlak 123
                      ls+ ++F++d i+a  +++ f ++++ Y  e++ + i++ ++   ++++ + ++d  +el +l ke     s++e++++ + +++ e+ ++ ++
       EPX72778.1   4 LSTTEHFRMDLIVATILLSLFIHFFDKYFKEKTINGIYQVYLACSKNEELKKNKDIfRELLALKKElnrtSSQDEFAKWARLNRKYEKLNQEWE 97 
                      78899**********************************9988766655555444325555554440001566777777777777777666444 PP

                      .......TS-BS--HHHHH CS
  ThylakoidFormat 124 slkaiaenskfkYSrlfai 142
                      + +++ ++ +  + ++++i
       EPX72778.1  98 AQSNVVQKFQETFKKFVSI 116
                      4445555555556666655 PP

>> DUF1240  Protein of unknown function (DUF1240)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.034   1.5e+02      49      78 ..      14      49 ..       2      62 .. 0.57
   2 ?    3.9   0.1     0.017        76      34      67 ..     102     132 ..      88     139 .. 0.70
   3 ?    9.0   0.3   0.00044         2      18      81 ..     116     179 ..     113     181 .] 0.90

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.034
     DUF1240 49 iailsfvlslflslYvdyklks......egYlvCek 78
                + +++++lslf+ ++ +y  ++      + Yl C+k
  EPX72778.1 14 LIVATILLSLFIHFFDKYFKEKtingiyQVYLACSK 49
                455666777777776555221111112234666666 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.017
     DUF1240  34 klakvndklvkllaiiailsfvlslflslYvdyk 67 
                  ++k+++++ k    ++i+  +l+  + +Y++yk
  EPX72778.1 102 VVQKFQETFKK---FVSIVLWILTRGFRFYIQYK 132
                 44455554444...4667788999999*****98 PP

  == domain 3  score: 9.0 bits;  conditional E-value: 0.00044
     DUF1240  18 lllYfsvlvvlvaitnklakvndklvkllaiiailsfvlslflslYvdyklksegYlvCekisw 81 
                 ++l++++  + ++i++k+ k    +  ++ + + +  +lsl+ s Y + +l+  +Y v + is 
  EPX72778.1 116 IVLWILTRGFRFYIQYKKSKAPVFFLPAFLLPSWALWFLSLPRSKYGSVSLTVWNYAVGKTISA 179
                 567777888889999999999999999999999999**********************999996 PP

>> MapZ_EC1  MapZ extracellular domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   4.9   1.8e-05     0.081      22      87 ..      38     108 ..      31     110 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.8e-05
    MapZ_EC1  22 ekeyaafftddketflk.nsef.aklseLekkLeklkgskeYkk...lkkkldslkkqisaieavNsqFtk 87 
                 +  y+ +   +k++ lk n  +  +l +L+k+L+  ++++e+ k   l++k+++l+++++a+++v ++F++
  EPX72778.1  38 NGIYQVYLACSKNEELKkNKDIfRELLALKKELNRTSSQDEFAKwarLNRKYEKLNQEWEAQSNVVQKFQE 108
                 55566666666666665255556*************998877644449*********************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1532  (0.0854482); expected 358.6 (0.02)
Passed bias filter:                      631  (0.0351944); expected 358.6 (0.02)
Passed Vit filter:                        70  (0.00390429); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.29s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 1237.88
//
Query:       EPX72779.1  [L=754]
Description: m-AAA protease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.6e-63  211.5   0.1    1.5e-62  210.8   0.1    1.3  1  Peptidase_M41  Peptidase family M41
    4.1e-42  143.7   0.0    8.3e-42  142.7   0.0    1.5  1  AAA            ATPase family associated with various cellular
    5.3e-10   38.9   0.0    1.8e-09   37.3   0.0    1.9  1  AAA_lid_3      AAA+ lid domain
    6.8e-10   39.3   0.1    2.2e-09   37.6   0.1    1.9  1  FtsH_ext       FtsH Extracellular
     0.0027   18.1   0.1      0.054   13.9   0.1    2.5  2  AAA_16         AAA ATPase domain
     0.0029   17.6   0.0     0.0089   16.0   0.0    1.9  1  AAA_5          AAA domain (dynein-related subfamily)
     0.0058   15.9   0.0     0.0096   15.2   0.0    1.3  1  TIP49          TIP49 P-loop domain
  ------ inclusion threshold ------
      0.011   15.5   0.0      0.034   13.9   0.0    1.8  2  RuvB_N         Holliday junction DNA helicase RuvB P-loop dom
      0.025   14.7   0.0      0.087   12.9   0.0    1.9  1  AAA_2          AAA domain (Cdc48 subfamily)
      0.028   14.7   0.0       0.49   10.7   0.0    2.7  2  AAA_22         AAA domain
       0.11   12.3   0.0       0.21   11.3   0.0    1.5  1  IstB_IS21      IstB-like ATP binding protein
       0.14   12.6   0.0       0.31   11.5   0.0    1.6  1  AAA_17         AAA domain


Domain annotation for each model (and alignments):
>> Peptidase_M41  Peptidase family M41
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  210.8   0.1     1e-65   1.5e-62       1     190 [.     532     714 ..     532     715 .. 0.97

  Alignments for each domain:
  == domain 1  score: 210.8 bits;  conditional E-value: 1e-65
                    XX--HHHHHHHHHHHHHHHHHHCCSSS-S-B--EES--TTS-----------TSS--BHHHHHHHHHHHHHHHHHHHHHHH..S-BGGGHHHHHHH CS
  Peptidase_M41   1 rvisekekklvAyHEaGHalvglllkeadpveKvtiiPRgqalGltlslPeedklsltkeellarlavllGGraaEelifg..evttGasnDleka 94 
                    rv+s +ek++vA+HEaGHa+ g++++  dp+ Kv+iiPR+qalG++ +lP+++ + ++k ++l+++ ++l Gr++Ee++fg  ++t+Gas+D++k+
     EPX72779.1 532 RVLSPEEKNTVAHHEAGHAVAGWFMEYVDPLLKVSIIPRAQALGYASYLPKDQ-YLMSKGQILDQMGMALAGRVSEEVFFGtdKITSGASDDFQKV 626
                    6899**********************************************998.89**************************************** PP

                    HHHHHHHHHTS---TTT-S--------..----.------SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSEE-HHHHHH CS
  Peptidase_M41  95 tkiarkmvtefGmsdklGpvsleeeeeeevflgkelkkekelseetaeeideevkelveeayerakeileekreelealaeaLlekEtldaeeiee 190
                    t++a++ vt+fGms ++G++s+  +++e        + +k++se+ta++idee+++lv+ ayer++++l e++e le++a++LlekE+++++e+e 
     EPX72779.1 627 TRMAQAYVTQFGMSPSVGTISYPMDSRE--------SVQKPFSEATAQIIDEEIRKLVKFAYERTRNLLIEHKEGLENIAKRLLEKEVITYSEVEG 714
                    **********************998874........3579****************************************************9975 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.7   0.0   5.5e-45   8.3e-42       2     131 ..     317     449 ..     316     450 .. 0.96

  Alignments for each domain:
  == domain 1  score: 142.7 bits;  conditional E-value: 5.5e-45
                 EEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHH....TTCCCHHHHHHHHHHHHHHHHT CS
         AAA   2 llyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr....sgseseeeervvnqLlteldgv 96 
                 +l+GppGtGKTllaka a e++v+fl++sgse+l+++vg +++++r+lf++a+++a p+i+f+DEida++ksr    + ++++e+e+++nqLl e+dg+
  EPX72779.1 317 ILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNA-PCIIFVDEIDAIGKSRgrggQFGSNDERESTLNQLLVEMDGF 414
                 79*****************************************************9.*****************98666699***************** PP

                 TTSSSTEEEEEEESSGGGSTHHHHS.TTSSEEEETT CS
         AAA  97 kkkeskvivigatnrpdkldpallr.gRfdrkieie 131
                 + +e+ ++v + tnrpd ldpallr gRfdr+++i+
  EPX72779.1 415 TPSEH-IVVFAGTNRPDVLDPALLRpGRFDRQVHID 449
                 **977.**************************9987 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.3   0.0   1.2e-12   1.8e-09       5      44 ..     478     517 ..     474     518 .. 0.92

  Alignments for each domain:
  == domain 1  score: 37.3 bits;  conditional E-value: 1.2e-12
   AAA_lid_3   5 keLAerTeGySGADlaalcreAallAlrrgikeitmedfe 44 
                 k+L  +T G++GAD+ ++c+e al A r g +++ m +fe
  EPX72779.1 478 KRLSVLTSGFTGADIMNVCNEGALIAARGGSDSVQMVHFE 517
                 566779*********************************8 PP

>> FtsH_ext  FtsH Extracellular
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.6   0.1   1.5e-12   2.2e-09       6     106 ..     121     211 ..     119     214 .. 0.82

  Alignments for each domain:
  == domain 1  score: 37.6 bits;  conditional E-value: 1.5e-12
    FtsH_ext   6 llallllllllslfggsgtgstkeisyseFl.edleqgnvekvvvqestisalirrptgdgvsttkkgnstttystptlgsvesleekLeealkskgvd 103
                 l  +l+ ++l++   +s +   +ei++++F+ + l++g ve+  v+++++       +  + ++  + ++ +++s+++   ves+++kLe+a+k++g+ 
  EPX72779.1 121 LGSILVTYILYNV--LSPGANMQEITWQDFRqQFLDKGLVERLIVVNQNRV------RVILRGGMPNASGQYYFSIGS---VESFDRKLEAAQKELGIP 208
                 4556677777777..99999**********99**************88888......666666666666666666666...*****************9 PP

    FtsH_ext 104 ves 106
                 ++ 
  EPX72779.1 209 SSE 211
                 876 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.1   3.6e-05     0.054      16      45 ..     305     334 ..     303     353 .. 0.83
   2 ?    1.0   0.0      0.33   4.9e+02     124     146 ..     362     383 ..     356     411 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 3.6e-05
      AAA_16  16 lervrsgrpelvllsGesGvGKsslvrell 45 
                 +er+ +  p+  +lsG++G+GK+ l+++ +
  EPX72779.1 305 YERLGAKIPRGAILSGPPGTGKTLLAKATA 334
                 67888888999**************98876 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.33
      AAA_16 124 krllallsrderplvlvlDdlqw 146
                 ++l+a +++   p ++++D+++ 
  EPX72779.1 362 RDLFATARK-NAPCIIFVDEIDA 383
                 556667777.6779999999995 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0     6e-06    0.0089       3      79 ..     317     387 ..     315     438 .. 0.68

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 6e-06
                 EEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------G-SEEEEESGGG--.H CS
       AAA_5   3 lLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraaregeilvlDEverae.s 79 
                 +L GppGtgK+ la+  a   n +++ v ++++++    +g+ ++       +d  ++   + ++i+++DE++ +  s
  EPX72779.1 317 ILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGVGPSRV-------RDLFATARKNAPCIIFVDEIDAIGkS 387
                 89******************************9976666666665.......55555544448999999999987744 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   6.4e-06    0.0096      51      89 ..     314     350 ..     260     355 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 6.4e-06
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  51 ravLlaGpsgtGktalaiaiskelgedvpfvalsgsevy 89 
                 r+ +l+Gp+gtGkt la a + e +  vpf ++sgse+ 
  EPX72779.1 314 RGAILSGPPGTGKTLLAKATAGEAN--VPFLSVSGSEFL 350
                 7889***************999865..*********985 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   2.3e-05     0.034      36      94 ..     316     382 ..     278     388 .. 0.73
   2 ?   -2.7   0.0       2.8   4.2e+03      50      93 ..     665     712 ..     663     715 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 2.3e-05
      RuvB_N  36 vllyGpPGlGkttlakiiakelgvklkitsgPvl.........ekagdlaalltnleekdvlfideih 94 
                  +l+GpPG Gkt lak  a e +v + + sg            ++ +dl a   + ++  ++f+dei 
  EPX72779.1 316 AILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFlemfvgvgpSRVRDLFATARK-NAPCIIFVDEID 382
                 589**********************999998643111222222344555554333.333466777765 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 2.8
      RuvB_N  50 akiiakelgvklk....itsgPvlekagdlaalltnleekdvlfidei 93 
                 a+ii +e+   +k     t    +e++  l  + ++l ek+v+   e+
  EPX72779.1 665 AQIIDEEIRKLVKfayeRTRNLLIEHKEGLENIAKRLLEKEVITYSEV 712
                 566666665544311115777889999999999999999999877766 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   5.8e-05     0.087       7      84 ..     317     392 ..     314     415 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 5.8e-05
                 EEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTS.EEEEETGGG----....- CS
       AAA_2   7 lllgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG.ivllDEidKihpk....e 84 
                 +l gp g+Gkt+laka+a   +v    ++  +  se+le   +   v    +   + +++++   i+++DEid i ++    +
  EPX72779.1 317 ILSGPPGTGKTLLAKATAGEANV----PFLSVSGSEFLE---MFVGVGPSRVRDLFATARKNAPcIIFVDEIDAIGKSrgrgG 392
                 5789******************8....************...55555555555555544444436*********999754443 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00033      0.49       9      29 ..     317     337 ..     313     351 .. 0.83
   2 ?    0.3   0.0      0.51   7.7e+02      82     105 ..     361     387 ..     355     427 .. 0.67

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00033
      AAA_22   9 vvtGesGtGKTtllrrlleql 29 
                 ++ G++GtGKT+l++  + ++
  EPX72779.1 317 ILSGPPGTGKTLLAKATAGEA 337
                 799***********9876665 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.51
      AAA_22  82 leqalrarav..ielliiDEaqhlr.s 105
                 +++ + ++++  + ++ +DE++ +  s
  EPX72779.1 361 VRDLFATARKnaPCIIFVDEIDAIGkS 387
                 555555566667799*******99652 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00014      0.21      50      71 ..     316     337 ..     284     381 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00014
   IstB_IS21  50 ivllGpsGvGKshlaialgvea 71 
                  +l Gp+G+GK+ la a + ea
  EPX72779.1 316 AILSGPPGTGKTLLAKATAGEA 337
                 6899*************98877 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00021      0.31       2      59 ..     320     378 ..     319     432 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00021
                 E-TTSSHHHHHHHHHHHHTEEEEEH.HHHHHHHHHTTTSHSSHHHHCTSHHHHHHHHHH CS
      AAA_17   2 GgPGsGKgtqceklvekygfthlsa.Gdllreeakrgglakardemrklpleekkelqk 59 
                 G+PG GK+ +++  + + ++++ls  G+ + e+    g ++ rd ++++ ++  + +  
  EPX72779.1 320 GPPGTGKTLLAKATAGEANVPFLSVsGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFV 378
                 9**********************987999999999999888888887777666665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (754 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       615  (0.034302); expected 358.6 (0.02)
Passed bias filter:                      516  (0.0287802); expected 358.6 (0.02)
Passed Vit filter:                        77  (0.00429472); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.70u 0.30s 00:00:01.00 Elapsed: 00:00:00.47
# Mc/sec: 4805.25
//
Query:       EPX72780.1  [L=251]
Description: phosphoinositide biosynthesis protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.8e-52  176.4  25.7    1.2e-41  142.8  10.4    2.1  2  Scs3p     Inositol phospholipid synthesis and fat-storage-ind


Domain annotation for each model (and alignments):
>> Scs3p  Inositol phospholipid synthesis and fat-storage-inducing TM
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.8  10.4     7e-46   1.2e-41       2     156 ..      50     184 ..      49     192 .. 0.86
   2 !   40.2   7.9   1.5e-14   2.7e-10     203     246 .]     189     232 ..     181     232 .. 0.92

  Alignments for each domain:
  == domain 1  score: 142.8 bits;  conditional E-value: 7e-46
       Scs3p   2 lnyfankdnilNvlFVKrgWfWttlvvllllltepryeastsakstarkrrlkkallrylilTlwWilftqwffgppimdrifvltGgkCellfevfde 100
                 +nyf n +n++N lFVK+gWfWtt++++ ++  ++            +k+   k ++ry+++TlwW+l+tqwf+gp+++dr f+ltGg C+  f+v+  
  EPX72780.1  50 TNYFGNSKNLINILFVKKGWFWTTIAYFSHVWCQK------------NKQLGPKLITRYALATLWWFLVTQWFVGPSLIDRAFALTGGTCV-DFDVA-- 133
                 59******************************664............2345678999**********************************.44443.. PP

       Scs3p 101 eseeeeelsekvtsaaCkaaggkWkgGhDiSGHvFLlvlssllLleelapvvakra 156
                  s     + +  t+++Ck+a+g W+gGhD SGHvFLl++ssl++l e    ++++ 
  EPX72780.1 134 -SI----TFHPKTAVHCKSAKGFWTGGHDLSGHVFLLTHSSLFMLAESFDNFISHG 184
                 .33....45567899*******************************9988777654 PP

  == domain 2  score: 40.2 bits;  conditional E-value: 1.5e-14
       Scs3p 203 enilllalvglwlwmllmTaiyFHtllEklsGLlvallvvllvY 246
                 ++++l++l++lw+wml++T+ y+Ht lEk++G++ ++l +++vY
  EPX72780.1 189 STKILTGLLCLWWWMLFVTTAYYHTTLEKFTGFFSGILEWAVVY 232
                 45899**************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (251 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       542  (0.0302304); expected 358.6 (0.02)
Passed bias filter:                      284  (0.0158403); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.28s 00:00:00.76 Elapsed: 00:00:00.45
# Mc/sec: 1668.85
//
Query:       EPX72781.1  [L=365]
Description: STE/STE7 protein kinase Pek1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.1e-63  212.4   0.0    9.6e-63  212.0   0.0    1.1  1  Pkinase         Protein kinase domain
      3e-36  125.1   0.0    3.8e-36  124.7   0.0    1.1  1  Pkinase_Tyr     Protein tyrosine kinase
    1.4e-05   24.1   0.0    2.2e-05   23.5   0.0    1.2  1  Pkinase_fungal  Fungal protein kinase
    6.8e-05   22.3   0.0    0.00022   20.7   0.0    1.7  1  Kinase-like     Kinase-like
     0.0045   16.6   0.0        1.4    8.5   0.0    2.2  2  FTA2            Kinetochore Sim4 complex subunit FTA2
  ------ inclusion threshold ------
      0.011   15.1   0.0      0.016   14.5   0.0    1.2  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
       0.12   11.4   0.0        0.2   10.7   0.0    1.3  1  Seadorna_VP7    Seadornavirus VP7
       0.15   11.0   0.9       0.19   10.6   0.0    1.6  2  Haspin_kinase   Haspin like kinase domain
        0.2   11.5   0.0       0.33   10.8   0.0    1.3  1  APH             Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  212.0   0.0   4.8e-66   9.6e-63       5     264 .]      85     345 ..      82     345 .. 0.92

  Alignments for each domain:
  == domain 1  score: 212.0 bits;  conditional E-value: 4.8e-66
                 EEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEE..SSEEEEEEE--TTEBHHHHHH....HHSS--H CS
     Pkinase   5 eklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfee..kdelylvleyveggeladlle....rkgslse 97 
                 + lG G +G+V k++ + t+ ++A+K++    +++ ++ ++lrE+ki +++ +p+iv++y+++++  + +l + +e++  g+l+ +++    + g   e
  EPX72781.1  85 NSLGDGVSGSVRKCKVRGTDLTFALKTVFSAPNTSVQR-QLLRELKINRSCASPHIVKYYGACYDiaECQLNIAMEHCGAGSLDAVYKrvssKGGRTGE 182
                 689*****************************999885.9*************************8888999**********9999998886677799* PP

                 HHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-S CS
     Pkinase  98 eeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelessskltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgkpp 196
                 + + kia+ +l+gl+ylH+++iiHrD+Kp+NiLi +kg++K++DFG++ el +s  + +f+gts+Y+APE ++++ y+ ++D+WslG++l+e+  ++ p
  EPX72781.1 183 RPLGKIAHGVLSGLSYLHDRKIIHRDIKPSNILITTKGQVKLCDFGVSGELVNSL-AGTFTGTSYYMAPERISGSAYTISSDIWSLGLTLMEVALNRFP 280
                 *****************************************************98.******************************************* PP

                 TTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS..-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 197 fsgekgkekvekeldqlekilkilgetkeklpeasei..seeakdllkkllkkdpkkRltaeellqhpyl 264
                 f+ e++       l+ +e +  i++    +lpe+s i  s+ ++++l  +l kd+ +R++ +++l+hp++
  EPX72781.1 281 FPPEESP-----PLMPIELLSYIINMPPPALPEESGItwSKAFRHFLCVCLIKDKDERPGPQKMLRHPWV 345
                 **44444.....466666666777755666676666677******************************6 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.7   0.0   1.9e-39   3.8e-36       4     254 ..      84     338 ..      81     342 .. 0.84

  Alignments for each domain:
  == domain 1  score: 124.7 bits;  conditional E-value: 1.9e-39
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEE..SSSSEEEEEE--TTEBHHHHHHHT..CT CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvct..keepllivteyvkgGdLlkfLrkk..ek 97 
                   ++lG G  G+V +++++     ++++ a+Kt+ +  + + +++ll+e+ki +++  p+ivk++g+c+   e +l i +e +  G+L+   ++   + 
   EPX72781.1  84 MNSLGDGVSGSVRKCKVR----GTDLTFALKTVFSAPNTSVQRQLLRELKINRSCASPHIVKYYGACYdiAECQLNIAMEHCGAGSLDAVYKRVssKG 177
                  578***************....99*********99999999***************************777788*************99888763245 PP

                  TTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHH CS
  Pkinase_Tyr  98 ekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfGvll 195
                   ++  + l ++a+ v +G++yL+++k++Hrd+   N+L++++ +vk++DfG++ ++      + +++ +    +mapE ++ + +t +sD+Ws G +l
   EPX72781.1 178 GRTGERPLGKIAHGVLSGLSYLHDRKIIHRDIKPSNILITTKGQVKLCDFGVSGEL----VNSLAGTFTGTSYYMAPERISGSAYTISSDIWSLGLTL 271
                  667777899**********************************************9....4455666677889************************* PP

                  HHHHTTSSGT.....TTTSHHHHHHHHHHTTEES-BBTT....SBHHHHHHHHHHT-SSGGGS--HHH CS
  Pkinase_Tyr 196 wEiftlgesp.....ypglkneevleklkegkrlekpek....cpeelyelmkkcweedpeeRptfse 254
                  +E++   + p      p l++ e+l+++ +    + pe+    +++++ +++  c+ +d++eRp  ++
   EPX72781.1 272 MEVAL-NRFPfppeeSPPLMPIELLSYIINMPPPALPEEsgitWSKAFRHFLCVCLIKDKDERPGPQK 338
                  **976.45552223355667778888888888777777522225677778888899999999986555 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.0   1.1e-08   2.2e-05     315     397 ..     192     264 ..     185     267 .. 0.85

  Alignments for each domain:
  == domain 1  score: 23.5 bits;  conditional E-value: 1.1e-08
  Pkinase_fungal 315 aIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlkgeeHsyrhDL 397
                     ++ g+  L+ + +i+HrDi   Nilit      + +  L D+ +  el +    s a++ tGT ++ma e ++g+  ++  D+
      EPX72781.1 192 VLSGLSYLH-DRKIIHRDIKPSNILIT-----TKGQVKLCDFGVSGELVN----SLAGTFTGTSYYMAPERISGSAYTISSDI 264
                     677899999.*****************.....567788999999999994....55678*********999998888887776 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   1.1e-07   0.00022     158     250 ..     197     281 ..     179     303 .. 0.77

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 1.1e-07
  Kinase-like 158 anLqakglvhgkftvdnllldekgglmlggftaLvragtkvvlsevekgfaPpEllgsrggytrknktkmthkldaWqlGlviyriwclklPl 250
                   +L+++ ++h ++++ n+l   kg+++l +f+         v ++ + +f       +  +        +t++ d W lGl+   ++    P+
   EPX72781.1 197 SYLHDRKIIHRDIKPSNILITTKGQVKLCDFGVSGE----LV-NSLAGTFTGTSYYMAPER---ISGSAYTISSDIWSLGLTLMEVALNRFPF 281
                  68*****************************74222....22.455555544444333222...234589***************99988887 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   0.0   0.00072       1.4       5      59 ..      64     119 ..      60     146 .. 0.72
   2 !    6.0   0.0    0.0041       8.1     177     212 ..     188     228 ..     180     230 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00072
        FTA2   5 lpeidgPkLkpFdfsaekdiefleyLgkglhsiVlkvkirgk..eYALKl.Frfleae 59 
                 l +id+ +L+    ++   i +++ Lg+g+++ V k k+rg   ++ALK  F   +++
  EPX72781.1  64 LEDIDDEQLEDLVTNGG--ILYMNSLGDGVSGSVRKCKVRGTdlTFALKTvFSAPNTS 119
                 66667777777777777..8999******************97789***624444333 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.0041
        FTA2 177 qlpkllrdlkklhklgIvvrDlkeenyi.....dgkLvDls 212
                 +++ +l+ l  lh   I++rD+k++n++     + kL+D++
  EPX72781.1 188 IAHGVLSGLSYLHDRKIIHRDIKPSNILittkgQVKLCDFG 228
                 56778999******************975554445799987 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   8.2e-06     0.016      72     166 ..     133     227 ..     108     233 .. 0.72

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 8.2e-06
         Kdo  72 gvavpkpvaagavkvgle.yrAlllterlegaqdLedllakwaelaeelkrallkavgrli....aklhragvnHadlyaknillqqeeeeeaeiwliD 165
                   a p +v ++   ++++  +  + +e+  ga +L++++++ ++ +++  ++ l +++  +    + lh++++ H+d+ + nil+ +++    ++ l D
  EPX72781.1 133 SCASPHIVKYYGACYDIAeCQLNIAMEHC-GAGSLDAVYKRVSSKGGRTGERPLGKIAHGVlsglSYLHDRKIIHRDIKPSNILITTKG----QVKLCD 226
                 55556666655555555555556666654.7899999999988888888888888888765333378*********************9....777777 PP

         Kdo 166 l 166
                 +
  EPX72781.1 227 F 227
                 7 PP

>> Seadorna_VP7  Seadornavirus VP7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0    0.0001       0.2     151     187 ..     193     227 ..     183     243 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.0001
  Seadorna_VP7 151 lkdLmdfhsestnllhGDcnpenlmcDknGylklvDP 187
                   l+ L  +h  + +++h D++p+n++    G++kl D 
    EPX72781.1 193 LSGLSYLH--DRKIIHRDIKPSNILITTKGQVKLCDF 227
                   56688888..899*********************995 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.2       1.6   3.2e+03     327     358 ..      23      55 ..      16      64 .. 0.63
   2 ?   10.6   0.0   9.5e-05      0.19     230     254 ..     206     230 ..     187     236 .. 0.91

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.6
  Haspin_kinase 327 aekrvkerleklaklld.paakkkkklfkrkel 358
                     ekr +e++ +++ l+  p+ k+++ +  ++++
     EPX72781.1  23 PEKRRQEEILEITDLVFsPSEKQSDLIADKQNQ 55 
                    455666677888887754666777777766553 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 9.5e-05
  Haspin_kinase 230 HRdLhldniLvdknlnvtlidlkls 254
                    HRd++  niL+  +++v l+d+ +s
     EPX72781.1 206 HRDIKPSNILITTKGQVKLCDFGVS 230
                    *********************9776 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00017      0.33     166     187 ..     202     222 ..     183     231 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00017
                 EEEE-SS-SGGGEEEC..TTEE CS
         APH 166 tvllHgDlhpgNllvdpddgrv 187
                 + ++H+D++p N+l++ ++g+v
  EPX72781.1 202 RKIIHRDIKPSNILIT-TKGQV 222
                 669*************.88887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (365 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       427  (0.0238162); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2603.60
//
Query:       EPX72782.1  [L=456]
Description: ATP-dependent RNA helicase Dbp8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-43  148.5   0.0    3.6e-43  147.3   0.0    1.6  1  DEAD        DEAD/DEAH box helicase
    4.8e-30  104.2   0.1    2.3e-29  102.0   0.1    2.1  2  Helicase_C  Helicase conserved C-terminal domain
    1.8e-06   28.1   0.0    7.4e-06   26.1   0.0    2.0  2  ResIII      Type III restriction enzyme, res subunit


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.3   0.0   6.1e-47   3.6e-43       1     174 [.      31     201 ..      31     203 .. 0.93

  Alignments for each domain:
  == domain 1  score: 147.3 bits;  conditional E-value: 6.1e-47
                 -HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   1 tdiQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvd 99 
                 td+Q+ +ip+il+g+d+++ a+TGsGKT+af++p+l++ +  k+ +g  a++++PtreLa q+ +++  ++++++l+  li+gg +   q  +l+++++
  EPX72782.1  31 TDVQKGVIPQILKGHDCIGGAKTGSGKTAAFALPILESWS--KDPSGIYAVVLTPTRELAIQIDEQFAALGSNMNLKHTLIVGGMDMVAQAIALSRRPH 127
                 79**********************************9997..6***************************************************999** PP

                 EEEEEHHHHHHHH.....HCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTST.TTSEEEEEESSBSHHHH CS
                 xxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxx RF
        DEAD 100 ivvgtpgrlddll.....stgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgk.lqrqvivlSATlpkdvk 174
                 +vv+tpgrl+dl+     +  +  l++v+flV+DEadrll++ f d++  ++++lp      + ++rq+++++AT+++ ++
  EPX72782.1 128 VVVATPGRLADLIrsngpE-TTAGLQKVKFLVMDEADRLLSSTFADDLGDCFSNLP------PsENRQTLLFTATITDAIR 201
                 ***********99876642.2235*******************************6......557789********97766 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.47   2.8e+03      15      37 ..     185     205 ..     177     212 .. 0.77
   2 !  102.0   0.1   3.8e-33   2.3e-29       5     111 .]     246     353 ..     243     353 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.47
                 TTSEEEEEESSHHHHHHHHHHHH CS
  Helicase_C  15 eggkilifvntidrlekvkllle 37 
                 e++++l+f+ ti+++  ++ l+e
  EPX72782.1 185 ENRQTLLFTATITDA--IRQLKE 205
                 68999******9966..366644 PP

  == domain 2  score: 102.0 bits;  conditional E-value: 3.8e-33
                 HHHHHH.HHTTTTSEEEEEESSHHHHHH.HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHHHH CS
  Helicase_C   5 allell.kleeeggkilifvntidrlek.vklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvtsyi 101
                 +l++ll   e+ ++ ++ifvn++ ++e   ++l +  +++++ lh+++ q+er+ +l +f+++  ++L+atdva+rG+dip+v+l+infdlpr++++yi
  EPX72782.1 246 YLIHLLsIPENAEKSVIIFVNRTHTAELiYSML-RLLEFRSTELHSQMAQRERINSLGRFRAEAARILVATDVASRGLDIPSVQLIINFDLPRDPDDYI 343
                 56677666789999**********997653444.4448************************************************************* PP

                 HHHTTSSSTT CS
  Helicase_C 102 qriGRtgRag 111
                 +r+GRt+Rag
  EPX72782.1 344 HRVGRTARAG 353
                 ********97 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.0   1.2e-09   7.4e-06      31     169 ..      51     196 ..      28     198 .. 0.82
   2 ?   -1.8   0.6      0.45   2.7e+03      73     114 ..     383     435 ..     363     455 .. 0.50

  Alignments for each domain:
  == domain 1  score: 26.1 bits;  conditional E-value: 1.2e-09
                 ESTTSTHHHHHHHHHHHH-S......-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--........-SEEEEEHHHHHHTH........H CS
      ResIII  31 maTGtGKTlvaaklierllkkgkee.kflflvprkslleqtleefkkflseaykeigkkvsgdkkkakekd.stnkkilvttiqsldadseeeeeesee 127
                 + TG+GKT   a  i + ++k +    +++l p+++l  q  e+f+ + s+ + +++ +v g    a++++ s   +++v+t  +l   + + +  +++
  EPX72782.1  51 AKTGSGKTAAFALPILESWSKDPSGiYAVVLTPTRELAIQIDEQFAALGSNMNLKHTLIVGGMDMVAQAIAlSRRPHVVVATPGRLADLI-RSNGPETT 148
                 57*********99999988887766799************************99877777777776644431566778888888887777.66999999 PP

                 HHTTT-SEEEEETGGGTTS.TTTHHHHHT---......SEEEEEESS- CS
      ResIII 128 llrdrfdviiiDEaHrlgakkswreilekfke......avllglTATp 169
                 ++ ++ +++++DEa rl ++++   + ++f++         l +TAT+
  EPX72782.1 149 AGLQKVKFLVMDEADRLLSSTFADDLGDCFSNlppsenRQTLLFTATI 196
                 999****************7666668888866666777888999**97 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.45
                 HGGGGTGG....GEEEESSS-B--..................-SEEEEEHHHH CS
      ResIII  73 efkkflseaykeigkkvsgdkkka...........kekdstnkkilvttiqsl 114
                 e+++ +++++ e  k+v++ k++a           +++++++k+++ +    +
  EPX72782.1 383 EYEHASESKVLERLKEVTDAKRQAslemidrgfgeRRQKQKEKQLMASGRLDV 435
                 44444455544444444444444455555556543333333333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (456 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       816  (0.0455129); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 2992.80
//
Query:       EPX72783.1  [L=531]
Description: HC03 family inorganic anion exchanger [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.1e-79  265.6  15.6    1.6e-40  139.4   4.5    2.0  2  HCO3_cotransp  HCO3- transporter family


Domain annotation for each model (and alignments):
>> HCO3_cotransp  HCO3- transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.4   4.5   8.9e-45   1.6e-40       9     173 ..      25     189 ..      18     196 .. 0.95
   2 !  132.7   3.4   9.6e-43   1.7e-38     244     507 ..     195     468 ..     183     469 .. 0.88

  Alignments for each domain:
  == domain 1  score: 139.4 bits;  conditional E-value: 8.9e-45
  HCO3_cotransp   9 gGLveDikrrlplYlsDftdalnlqclasvlFlYfaclspaitFGgLlgeategaigvseslvsaaisgilfalfagqpllilgstgPllvfekil 104
                      ++ Di++r+p+Y sD++da + ++l ++l +Yfa+l+p ++F   + ++t++ +gv e+l++ +++ ++f+l++ qpl+i+g tgP+ vf+  +
     EPX72783.1  25 NSIYTDIRQRIPFYKSDWRDAWHYRILPACLNIYFANLLPELAFALDMFSKTDNSFGVNEVLLASVLGSVVFSLLSSQPLCIVGVTGPITVFNYTI 120
                    56899******************************************************************************************* PP

  HCO3_cotransp 105 ykfckelgldylslrvwiglwlalillilvatdasalvkyitrfteeifallIslifiyealkkllkif 173
                    y++ ++++  y+ + +wi+lw a++  i+++ ++  +vk+it+f  eif l++++i++ + ++ l++  
     EPX72783.1 121 YNIFHDRNTPYFPFLCWICLWSAVFHWIIALSNLVHFVKFITKFSCEIFGLYVAFIYLEKGVQVLTNQL 189
                    *********************************************************998887776655 PP

  == domain 2  score: 132.7 bits;  conditional E-value: 9.6e-43
  HCO3_cotransp 244 vallsliLflgtfllalfLkkfkksrflptkvRelisDfavliailvmvlvdvllg...vetpklevpeefkptsekrgwlinpleknpwwlvlaa 336
                     ++l + ++l  ++++ + +++ +s+ +++k+R ++ D++++ +i++++ ++++ +   ++ +kl  ++ f pt ++r+w+i ++ k+++  v++a
     EPX72783.1 195 NTFLAITIALLFMVIGWICNSIGSSSLFNHKIRVFLLDYGLVASIIFFSGFQHIGKmrqIDLSKLPTSKAFLPT-QDRSWFI-KFWKISVGDVFLA 288
                    456777777888999**********************************9888776555888999999*****8.67*****.7889********* PP

  HCO3_cotransp 337 vlpallvtiLifmdqqitavivnrkenkLkKgsgyhlDLlvvavlilvlsllGlPwlvaatvlsitHvnslkvesetsapG......ekpkilgvr 426
                    +  a+++tiL++ d+++++++ + ++  LkK sg+h+D+++++++++v ++lG+P   + +++++ H   l v++   +         k  i +v 
     EPX72783.1 289 IPFAVVLTILFYFDHNVSSLMAQDPSFPLKKPSGFHWDFFLLGITTFVSGILGIPAPNGLIPQAPMHTATLCVTKVEEDDEekqdykVKVVIERVI 384
                    *******************************************************************999966543333330001225557889** PP

  HCO3_cotransp 427 EqRvtgllvfiliglsvl..ltpvlklIPmpVLyGvFLYmgvtsLkgiqlfdRilLllmpakhqpdtiYlrkvplrk.vhlFTl 507
                    EqRv+++l  +++  ++   l  vl+ IP  VL G+F  mg++++ g++++  i  ++ + k  ++ + l +++ r+ v l+T+
     EPX72783.1 385 EQRVSNFLQGLMTLGTMTgpLLVVLHQIPQCVLAGLFWVMGFSAIAGNNITRNIFWMFADRKVLSQGHVLNHCRSRRaVWLYTC 468
                    ********9999877777778899**************************************************9876899998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (531 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       909  (0.0507); expected 358.6 (0.02)
Passed bias filter:                      475  (0.0264934); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 3720.88
//
Query:       EPX72784.1  [L=584]
Description: hypothetical protein SOCG_00546 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.1e-111  372.5  10.7   9.3e-110  367.6  10.7    2.0  1  NPR3      Nitrogen Permease regulator of amino acid transport


Domain annotation for each model (and alignments):
>> NPR3  Nitrogen Permease regulator of amino acid transport activity 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  367.6  10.7  5.2e-114  9.3e-110       1     466 [.      74     478 ..      74     479 .. 0.87

  Alignments for each domain:
  == domain 1  score: 367.6 bits;  conditional E-value: 5.2e-114
        NPR3   1 gfdseflaellsPerelcntrFeltvDdlaFlGlPvhvdedgkwrkskkkkkkskrkrssrskekkskesskksesssksesseekksskeseeseeke 99 
                 g+++ fla++lsP++elcn++Fe++vD l+FlG+Pvhv ++g+w k+       k+ +++ +  ++++++s+ +e+s++++s+                
  EPX72784.1  74 GYEKGFLANMLSPRPELCNQKFEMWVDGLTFLGCPVHVGPSGEWVKR-------KNPSKNIE-VSSMTDPSAIKEDSTSYTSA---------------- 148
                 8999*******************************************.......34443322.23333433333222222221................ PP

        NPR3 100 sneeeeeeededdeesekeeeekedkkknltmFhlvfvln.PplseynsrvdemYenvvkklsaalkyeQaksdYVskEcekilklkekalkeskklke 197
                 + +        d       + ++ +++++++ Fh+vfvln P  s y+  ++++Ye +v kl + lkyeQak++YV++Ec++i+k++e+  ++++++++
  EPX72784.1 149 NTA--------DT------KPNQYKSNSSMSLFHVVFVLNiPTASVYRPTINTLYECIVIKLVTGLKYEQAKRNYVENECKNIIKMNERNINNKISFDD 233
                 111........11......123567899*********************************************************************** PP

        NPR3 198 lyreilekSsLAraltelyesisknkiAslelnddvtislqiPiktefsklpnekeeavlpgsyltsilneseseedeeeeeekfLeknyaLLlLddek 296
                 ++rei ++S+LA+ l + ye++ + ++A+le+n++++i+l  P++ ++s+l + + ++    +  +++      +e+e +  e+f++++ +LLlL+d +
  EPX72784.1 234 FCREIPAHSNLASVLVTTYEALIHLHTAYLEINQSINITLLWPMTVSVSSLDKLELQERSSTILASQT----IFNEEEPSLIEPFVAPYWSLLLLQDLE 328
                 ******************************************************99984444443333....33444445568**************** PP

        NPR3 297 kiikelekssaeddeltvllaelvralkptlslaeyaslldedleeeqvsesnslelsqirslarhLiywRrArvIdplssrdvYivsPladlskleqa 395
                 +i+k+l        + + lla++++ ++pt  ++++a+ l ++l             s+   la+hLi+wR+A++I+pl  r++Y+ sP+adlskl+++
  EPX72784.1 329 SIMKRLP------LSRNSLLASFITEARPTSTFTDIANSLGISL-------------SECFLLAKHLIHWRKAIAIPPLLIRNTYVTSPTADLSKLKSD 408
                 ******4......46788****************8888776555.............5689************************************** PP

        NPR3 396 saeFkekFpslPsLpkfLsaLSsskprpfssiipskehrelYleaLaWLlrkglvtqlltfarirvdkeik 466
                    Fk++FpslPsLp+fL+ LS  kpr+f+siipsk+h ++Y+e+LaWL+r+++v+++ ++++++v+++ik
  EPX72784.1 409 ASLFKRTFPSLPSLPTFLAILSF-KPRSFGSIIPSKDHESTYMEMLAWLCRRNWVYEQNSYIYVCVTPQIK 478
                 **********************6.7*********************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (584 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       525  (0.0292822); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.27s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 3958.62
//
Query:       EPX72785.1  [L=692]
Description: Ku domain-containing protein Pku80 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-37  129.7   0.2    2.4e-37  128.7   0.2    1.4  1  Ku          Ku70/Ku80 beta-barrel domain
    6.2e-14   52.3   0.7    1.2e-13   51.3   0.7    1.5  1  Ku_N        Ku70/Ku80 N-terminal alpha/beta domain
    3.1e-09   37.0   0.0    6.5e-09   36.0   0.0    1.5  1  Ku_PK_bind  Ku C terminal domain like


Domain annotation for each model (and alignments):
>> Ku  Ku70/Ku80 beta-barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.7   0.2     4e-41   2.4e-37       4     195 ..     240     448 ..     238     455 .. 0.85

  Alignments for each domain:
  == domain 1  score: 128.7 bits;  conditional E-value: 4e-41
          Ku   4 gvsipVklykateeakkpkfkkldketne...................pvkvetkyvcsdtg.....evdeedivkgyeyGgevvpltkeelekiksfd 78 
                  v+i V+ y++++ +k+p+ + +++ +n+                    +++ + yv +d++     evd++d+  gy yG+++vp+++ + + +   +
  EPX72785.1 240 SVTIHVERYPRIRVTKPPTSTAFNAGSNTedehteqfpssqekpwesnAISTVRSYVVRDSQtnevfEVDRKDLESGYSYGRTIVPISRSDEDILALDT 338
                 69********************9999999889999999999999999955666667776654568977*************************766666 PP

          Ku  79 skglkllgFvplseilkeylsikssyfiyPddkdekgstkafsaLveamleskkvaivrfvlrskskprlvaLvPqeeelsseeekeglvlvtLpfadd 177
                 + g +++gF+p+ + l+ y++i +s++++P  +de++ +  fs++v+++++++++a++r+v++++  p+l +L+P+    +s++  ++lv v+Lpfa+d
  EPX72785.1 339 KAGYEVMGFIPKTS-LPCYYTISESNIVIP-RGDETNKQ-KFSSFVQSLEREHRYALARYVSKERGPPTLLVLMPF---VESKK--HYLVDVQLPFAED 429
                 ************88.999999*********.55555454.7***********************************...44433..5************ PP

          Ku 178 iRslkfpsldee.eeekkn 195
                 +R ++fp+l+e  + ++k+
  EPX72785.1 430 VRPYQFPDLEELsDPQEKQ 448
                 *********3332333333 PP

>> Ku_N  Ku70/Ku80 N-terminal alpha/beta domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.3   0.7     2e-17   1.2e-13       1     149 [.       6     152 ..       6     210 .. 0.86

  Alignments for each domain:
  == domain 1  score: 51.3 bits;  conditional E-value: 2e-17
                 EEEEEEE-SHHHHCTTCCSCC.HHHHHHHHHHHHHHHHHHCTCS.EEEEEEEESSSSTBS....TTTCTTEEEEEECCCHHHHHHHHHHCCHHHCCHHH CS
        Ku_N   1 avvfviDvspaMfesskeees.pfelalkciaellkrkvisrsk.DlIavvlygtdesen....keqlenitvlreldlpdaellkelkqivesedasv 93 
                 ++vfviD++  M +   + +   +elal++ ++ ++rk++ ++k D +++v + +de++n    +e++ ni v+ ++++  + +l+  k+ + +     
  EPX72785.1   6 CTVFVIDLGADMGDCHHGRQRtDLELALSYFQDQISRKLLLNRKtDVVGIVTFKCDETKNdlaeQEAYWNINVIYPIQTSLFTKLQAVKSRLVP----- 99 
                 79************99999999*****************************************99*****************************..... PP

                 HCCCTTSS-TTHHHHHHHHHHHHHH.TTSSESEEEEEEEESSSSTCCGHHHHHHHHH CS
        Ku_N  94 eglaedssqasllsaLivclellqk.vgkklskkriflftdlddpfedsdklelilq 149
                     +   q++l sa+ v+++++++ ++k+  +k ++++t  +  f  sd+l ++ q
  EPX72785.1 100 ----NRTMQGDLISAIVVSFDIIARfCKKNKWRKNMIVLTGARGIFDFSDFLGISEQ 152
                 ....999******************88888899*******99888866666655544 PP

>> Ku_PK_bind  Ku C terminal domain like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.0   0.0   1.1e-12   6.5e-09       1     107 [.     586     684 ..     586     691 .. 0.89

  Alignments for each domain:
  == domain 1  score: 36.0 bits;  conditional E-value: 1.1e-12
  Ku_PK_bind   1 dPvedFkkllaqkdeedlvekavkqlksvIeqlvedslgdssydkaveclkalReeaieeeepelyNdFlrdlkkklqse.ggdrrefWkelvkkeklg 98 
                 dPv+ F ++l++      +e+a ++++ v+++l+ +     ++d a++ l+alR ++i e+e+++yN+++++l++ ++++   + ++   + ++++ l 
  EPX72785.1 586 DPVGTFTEILKNPFG---LEDALSEMEGVVRRLIAKE----QTDLALSSLQALRFHSILEDEADRYNRYITQLQTDISESvLPRTNDTL-SRITSD-LA 675
                 79*********9977...89**************988....5569********************************974677888888.699999.99 PP

  Ku_PK_bind  99 lIskdeaes 107
                 +I+ +e  +
  EPX72785.1 676 PIQYEELTK 684
                 999888766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (692 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       438  (0.0244297); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.25s 00:00:00.85 Elapsed: 00:00:00.43
# Mc/sec: 4845.52
//
Query:       EPX72786.1  [L=481]
Description: DNAJ/TPR domain-containing protein DNAJC7 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    9.7e-29   98.0  24.6    5.2e-06   26.1   0.0    7.3  8  TPR_1         Tetratricopeptide repeat
    1.3e-28   98.9   1.4      4e-28   97.3   0.7    2.4  1  DnaJ          DnaJ domain
      3e-27   92.5  22.5    1.8e-07   30.7   0.0    8.2  8  TPR_2         Tetratricopeptide repeat
    3.3e-18   66.1  16.0    2.5e-06   28.0   0.1    5.5  5  TPR_16        Tetratricopeptide repeat
    7.2e-15   55.0  13.1    0.00024   21.3   0.1    6.3  5  TPR_12        Tetratricopeptide repeat
    1.3e-14   53.6  18.4    2.4e-05   23.9   0.0    6.2  6  TPR_11        TPR repeat
    1.5e-13   50.3  10.1     0.0011   19.6   0.0    7.3  7  TPR_14        Tetratricopeptide repeat
    2.2e-11   43.0  16.1     0.0042   17.2   0.0    7.1  7  TPR_8         Tetratricopeptide repeat
    1.5e-10   41.4  19.4    0.00096   19.6   0.7    6.1  6  TPR_19        Tetratricopeptide repeat
    4.1e-10   39.7   0.4     0.0017   18.4   0.4    3.5  3  TPR_9         Tetratricopeptide repeat
    7.9e-10   38.8  11.2    0.00083   19.5   0.2    4.3  4  ANAPC3        Anaphase-promoting complex, cyclosome, subunit 
    2.6e-06   27.4  14.2       0.01   16.1   0.3    6.7  7  TPR_17        Tetratricopeptide repeat
    4.6e-05   22.8  10.3      0.018   14.3   1.2    4.4  6  TPR_15        Tetratricopeptide repeat
    6.1e-05   22.5   1.1    0.00023   20.7   0.2    2.5  2  TPR_MalT      MalT-like TPR region
    0.00048   20.6  10.9       0.65   10.8   0.0    7.3  7  TPR_6         Tetratricopeptide repeat
     0.0021   17.9  13.9        2.3    8.4   0.0    6.8  7  TPR_7         Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.017   15.2  12.2          1    9.5   0.2    5.1  5  MIT           MIT (microtubule interacting and transport) dom
      0.021   14.8   4.5       0.74    9.9   0.1    3.5  2  TPR_3         Tetratricopeptide repeat
      0.076   12.9  11.0         17    5.4   0.1    5.8  7  TPR_10        Tetratricopeptide repeat
       0.08   12.4   2.8        8.9    5.9   0.0    4.0  4  SHNi-TPR      SHNi-TPR
        0.2   11.7   1.8        2.1    8.3   0.1    2.3  2  DUF4192       Domain of unknown function (DUF4192)
       0.28   11.5   3.4        1.6    9.1   0.0    3.4  3  TPR_20        Tetratricopeptide repeat
       0.39   10.8   6.4         14    5.7   0.7    3.7  2  SRP_TPR_like  Putative TPR-like repeat


Domain annotation for each model (and alignments):
>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.3   1.3e-06     0.001       4      30 ..      26      52 ..      23      53 .. 0.91
   2 !   15.2   0.1   1.7e-05     0.013       2      25 ..      60      83 ..      59      85 .. 0.88
   3 ?   -2.3   0.1         6   4.7e+03       6      23 ..     110     127 ..     109     130 .. 0.68
   4 ?   -2.7   0.1         8   6.2e+03       5      20 ..     147     162 ..     147     164 .. 0.83
   5 !   26.1   0.0   6.7e-09   5.2e-06       2      34 .]     178     210 ..     177     210 .. 0.95
   6 !   18.6   1.1   1.5e-06    0.0011       8      34 .]     230     256 ..     227     256 .. 0.92
   7 !   21.2   0.1   2.3e-07   0.00018       1      32 [.     261     292 ..     261     294 .. 0.94
   8 !   11.4   0.0   0.00027      0.21       2      31 ..     296     325 ..     295     328 .. 0.92

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 1.3e-06
                HHHHHHHHHHTT-HHHHHHHHHHHHHH CS
       TPR_1  4 lynlGnayfklgkydeAleyyekALel 30
                 + lGn +++++++ eA+++y  A+el
  EPX72786.1 26 QKALGNDFYRKKNFSEAIKAYTSAIEL 52
                5679*********************98 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 1.7e-05
                HHHHHHHHHHHHTT-HHHHHHHHH CS
       TPR_1  2 kalynlGnayfklgkydeAleyye 25
                  + n++++y+ +g+++ Al + +
  EPX72786.1 60 VYYSNRAATYMLMGEFELALSDAK 83
                679****************98765 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 6
                 HHHHHHHHTT-HHHHHHH CS
       TPR_1   6 nlGnayfklgkydeAley 23 
                 n + +y+k+++   Al +
  EPX72786.1 110 NEAEVYLKNKQGGLALNA 127
                 567889998886666665 PP

  == domain 4  score: -2.7 bits;  conditional E-value: 8
                 HHHHHHHHHTT-HHHH CS
       TPR_1   5 ynlGnayfklgkydeA 20 
                 y ++ +y  ++++ +A
  EPX72786.1 147 YLKARVYICQNDLSQA 162
                 6688899999999998 PP

  == domain 5  score: 26.1 bits;  conditional E-value: 6.7e-09
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALelnPnn 34 
                 +al  +G+++++ g+  +A+ ++++AL+l+P++
  EPX72786.1 178 EALVLRGQVLYYSGENAKAVTHFQEALKLDPDC 210
                 79999**************************96 PP

  == domain 6  score: 18.6 bits;  conditional E-value: 1.5e-06
                 HHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   8 GnayfklgkydeAleyyekALelnPnn 34 
                 Gn  fk+gk+d A e y+kAL ++ +n
  EPX72786.1 230 GNDAFKQGKLDLAYELYSKALDIDADN 256
                 8999*******************9776 PP

  == domain 7  score: 21.2 bits;  conditional E-value: 2.3e-07
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHST CS
       TPR_1   1 akalynlGnayfklgkydeAleyyekALelnP 32 
                 ak + n++ +++kl+k++eAl++ + A++++ 
  EPX72786.1 261 AKLYMNRATVLLKLKKPEEALKDSDNAIQIDS 292
                 799**************************997 PP

  == domain 8  score: 11.4 bits;  conditional E-value: 0.00027
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHS CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALeln 31 
                 k l+ ++ a+  l+++++A+ + + A+ l+
  EPX72786.1 296 KGLKTRAKAHEALEQWEDAVRDIQSAIDLD 325
                 67889***********************98 PP

>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.3   0.7   5.1e-31     4e-28       1      63 []     349     411 ..     349     411 .. 0.99

  Alignments for each domain:
  == domain 1  score: 97.3 bits;  conditional E-value: 5.1e-31
                 HHHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHHHHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ   1 dyYeiLgvskdasedeIkkaYrklalkyHPDknpkdpeaeekFkeineAyevLsdpekRkqYD 63 
                 d+Y+iLgvsk+a++ eIkkaYrk+al yHPDkn++d++ae kFke+ eAy +Lsdpe+R++YD
  EPX72786.1 349 DHYKILGVSKEATDTEIKKAYRKMALVYHPDKNAGDEKAEAKFKEVGEAYGILSDPESRRRYD 411
                 89************************************************************9 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.1   2.5e-06    0.0019       2      30 ..      24      52 ..      23      54 .. 0.92
   2 !    8.7   0.1    0.0026         2       2      26 ..      60      84 ..      59      85 .. 0.88
   3 ?   -1.3   0.2       4.1   3.2e+03       6      27 ..     110     131 ..     109     134 .. 0.81
   4 ?    3.6   0.0      0.11        87       3      33 ..     145     175 ..     143     176 .. 0.80
   5 !   30.7   0.0   2.3e-10   1.8e-07       2      33 ..     178     209 ..     177     210 .. 0.95
   6 !   14.8   0.7   2.9e-05     0.023       7      34 .]     229     256 ..     227     256 .. 0.92
   7 !   13.6   0.0   6.9e-05     0.054       1      32 [.     261     292 ..     261     294 .. 0.91
   8 !   12.8   0.0   0.00013     0.099       2      31 ..     296     325 ..     295     328 .. 0.91

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 2.5e-06
       TPR_2  2 ealynlGlayyklgdyeeAleafekAlel 30
                e   +lG+  y+++++ eA++a+  A+el
  EPX72786.1 24 EEQKALGNDFYRKKNFSEAIKAYTSAIEL 52
                66779**********************98 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0026
       TPR_2  2 ealynlGlayyklgdyeeAleafek 26
                 ++ n++  y+ +g++e Al + ++
  EPX72786.1 60 VYYSNRAATYMLMGEFELALSDAKQ 84
                589****************988765 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 4.1
       TPR_2   6 nlGlayyklgdyeeAleafekA 27 
                 n +++y+k+++   Al+a+++ 
  EPX72786.1 110 NEAEVYLKNKQGGLALNALDRL 131
                 6789999999988888888876 PP

  == domain 4  score: 3.6 bits;  conditional E-value: 0.11
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldPn 33 
                 + y  +++y+ ++d+ +A +     l+ +P+
  EPX72786.1 145 WSYLKARVYICQNDLSQAQKIALGFLRENPR 175
                 56899*************9977666666665 PP

  == domain 5  score: 30.7 bits;  conditional E-value: 2.3e-10
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleldPn 33 
                 eal  +G+++y++g+ ++A+ +f++Al+ldP+
  EPX72786.1 178 EALVLRGQVLYYSGENAKAVTHFQEALKLDPD 209
                 899****************************8 PP

  == domain 6  score: 14.8 bits;  conditional E-value: 2.9e-05
       TPR_2   7 lGlayyklgdyeeAleafekAleldPnn 34 
                 +G+ ++k+g+++ A e++ kAl +d +n
  EPX72786.1 229 QGNDAFKQGKLDLAYELYSKALDIDADN 256
                 799********************99765 PP

  == domain 7  score: 13.6 bits;  conditional E-value: 6.9e-05
       TPR_2   1 aealynlGlayyklgdyeeAleafekAleldP 32 
                 a++++n++ +++kl+++eeAl++ + A+++d 
  EPX72786.1 261 AKLYMNRATVLLKLKKPEEALKDSDNAIQIDS 292
                 789*******************9999999885 PP

  == domain 8  score: 12.8 bits;  conditional E-value: 0.00013
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleld 31 
                 ++l  +++a+++l ++e+A+++ + A+ ld
  EPX72786.1 296 KGLKTRAKAHEALEQWEDAVRDIQSAIDLD 325
                 56889***********************98 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.1   2.4e-06    0.0019       2      44 ..      28      67 ..      27      83 .. 0.90
   2 ?    0.3   0.3       1.4   1.1e+03       2      23 ..     110     131 ..     100     143 .. 0.74
   3 !   28.0   0.1   3.2e-09   2.5e-06       1      66 [.     147     209 ..     147     211 .. 0.97
   4 !   20.2   0.1   9.2e-07   0.00072       2      58 ..     228     286 ..     227     293 .. 0.91
   5 ?    5.8   0.4     0.027        21       3      32 ..     301     330 ..     300     338 .. 0.87

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 2.4e-06
      TPR_16  2 alaraalragdyddAaaaleaalkrdpssPdaaeAllllgdaa 44
                al+++++r +++ +A++a++ a++++   + +a A +++++aa
  EPX72786.1 28 ALGNDFYRKKNFSEAIKAYTSAIELG---SGTAKAVYYSNRAA 67
                79************************...99999***999998 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 1.4
      TPR_16   2 alaraalragdyddAaaaleaa 23 
                 ++a  +l++++   A++al+++
  EPX72786.1 110 NEAEVYLKNKQGGLALNALDRL 131
                 5677777777777777777765 PP

  == domain 3  score: 28.0 bits;  conditional E-value: 3.2e-09
      TPR_16   1 lalaraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalraapd 66 
                 + +ar ++ ++d  +A++ +  +l+ +   P+++eAl l+g++++  g+ a+A+  +++al+ +pd
  EPX72786.1 147 YLKARVYICQNDLSQAQKIALGFLREN---PRNVEALVLRGQVLYYSGENAKAVTHFQEALKLDPD 209
                 67899999*******************...**********************************97 PP

  == domain 4  score: 20.2 bits;  conditional E-value: 9.2e-07
      TPR_16   2 alaraalragdyddAaaaleaalkrdpssPd.aaeAllllgdaalrqgrlaeAa.alyr 58 
                 a++++a+++g+ d A +++  al+ d++  + +a  +++++ ++l+++  +eA+ +  +
  EPX72786.1 228 AQGNDAFKQGKLDLAYELYSKALDIDADNKFtNAKLYMNRATVLLKLKKPEEALkDSDN 286
                 79************************77777**********************966555 PP

  == domain 5  score: 5.8 bits;  conditional E-value: 0.027
      TPR_16   3 laraalragdyddAaaaleaalkrdpssPd 32 
                 +a+a+ ++ +++dA++  + a+++d++++ 
  EPX72786.1 301 RAKAHEALEQWEDAVRDIQSAIDLDAGDSS 330
                 6899999*****************987765 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.3     1e-05     0.008       8      71 ..      28      85 ..      21      85 .. 0.88
   2 ?    2.7   0.2      0.21   1.6e+02       8      66 ..     110     164 ..     102     167 .. 0.75
   3 !   15.2   0.1   2.5e-05      0.02      39      75 ..     171     207 ..     155     209 .. 0.79
   4 !   21.3   0.1     3e-07   0.00024       8      66 ..     228     282 ..     221     291 .. 0.88
   5 !   13.9   0.1   6.3e-05     0.049       3      71 ..     261     321 ..     259     326 .. 0.68

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 1e-05
      TPR_12  8 nlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleea 71
                 l++  +r +++ eA++ +  a+e+     G    + a ++ n + +y ++g++e Al+  +++
  EPX72786.1 28 ALGNDFYRKKNFSEAIKAYTSAIELG---SG---TAKAVYYSNRAATYMLMGEFELALSDAKQS 85
                5999******************9999...33...259*********************988775 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.21
      TPR_12   8 nlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAle 66 
                 n a+v+++ ++   Al  l++ +++  ++    +p  a   +  +r+y  ++++ +A++
  EPX72786.1 110 NEAEVYLKNKQGGLALNALDRLHRRLDSA---AKP-PAVWSYLKARVYICQNDLSQAQK 164
                 67889999999999999999886666444...343.46666777999999999999986 PP

  == domain 3  score: 15.2 bits;  conditional E-value: 2.5e-05
      TPR_12  39 pdhpltattlrnLgrlyralgryeeAlelleealaia 75 
                  ++p  +++l   g++++++g+ ++A+ +++eal+++
  EPX72786.1 171 RENPRNVEALVLRGQVLYYSGENAKAVTHFQEALKLD 207
                 5678889999999***99**************99986 PP

  == domain 4  score: 21.3 bits;  conditional E-value: 3e-07
      TPR_12   8 nlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAle 66 
                   ++  +++g++d A el+ kal+i   +  +++   a  + n ++++++l+++eeAl+
  EPX72786.1 228 AQGNDAFKQGKLDLAYELYSKALDID--A--DNKFTNAKLYMNRATVLLKLKKPEEALK 282
                 579999********************..5..566669********************96 PP

  == domain 5  score: 13.9 bits;  conditional E-value: 6.3e-05
      TPR_12   3 atalnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleea 71 
                 a+++ n+a+vl++l++ +eAl+  + a++i + +        +  l + + +++al+++e+A++  + a
  EPX72786.1 261 AKLYMNRATVLLKLKKPEEALKDSDNAIQIDSGY--------VKGLKTRAKAHEALEQWEDAVRDIQSA 321
                 67889************************99555........333444444444444444444444444 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.2     1e-05     0.008       1      42 []      30      73 ..      30      73 .. 0.83
   2 !   23.9   0.0   3.1e-08   2.4e-05       1      29 [.     184     212 ..     184     213 .. 0.94
   3 !   18.1   1.5     2e-06    0.0016       1      27 [.     230     256 ..     230     275 .. 0.80
   4 ?    2.4   0.1      0.16   1.2e+02       6      36 ..     273     303 ..     268     309 .. 0.75
   5 ?    1.7   0.1      0.26     2e+02       7      24 ..     308     325 ..     302     328 .. 0.85
   6 ?   -2.4   0.1         5   3.9e+03      30      39 ..     368     377 ..     367     377 .. 0.89

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1e-05
      TPR_11  1 GdayyeqGkyeeAieaYkkAlkldPdnaea..yynLGlayykqG 42
                G+ +y + ++ eAi+aY  A++l +  a a  y+n++++y+ +G
  EPX72786.1 30 GNDFYRKKNFSEAIKAYTSAIELGSGTAKAvyYSNRAATYMLMG 73
                99*********************886666544778888887766 PP

  == domain 2  score: 23.9 bits;  conditional E-value: 3.1e-08
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldPdnae 29 
                 G+++y  G++ +A++++++AlkldPd a+
  EPX72786.1 184 GQVLYYSGENAKAVTHFQEALKLDPDCAS 212
                 89***********************9776 PP

  == domain 3  score: 18.1 bits;  conditional E-value: 2e-06
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldPdn 27 
                 G+  ++qGk++ A e Y+kAl++d dn
  EPX72786.1 230 GNDAFKQGKLDLAYELYSKALDIDADN 256
                 8888*********************97 PP

  == domain 4  score: 2.4 bits;  conditional E-value: 0.16
      TPR_11   6 eqGkyeeAieaYkkAlkldPdnaeayynLGl 36 
                 ++ k eeA+++  +A+++d+ ++  +  +++
  EPX72786.1 273 KLKKPEEALKDSDNAIQIDSGYVKGLKTRAK 303
                 566779*************977766555555 PP

  == domain 5  score: 1.7 bits;  conditional E-value: 0.26
      TPR_11   7 qGkyeeAieaYkkAlkld 24 
                 + ++e+A+ + + A++ld
  EPX72786.1 308 LEQWEDAVRDIQSAIDLD 325
                 679999999999999998 PP

  == domain 6  score: -2.4 bits;  conditional E-value: 5
      TPR_11  30 ayynLGlayy 39 
                 ay +++l+y+
  EPX72786.1 368 AYRKMALVYH 377
                 899*****97 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0     0.006       4.7       2      37 ..      24      59 ..      23      72 .. 0.86
   2 ?    1.3   0.1       1.1   8.3e+02       8      39 ..     112     146 ..     111     152 .. 0.63
   3 !    8.4   0.0    0.0056       4.4       2      43 ..     143     185 ..     141     186 .. 0.88
   4 !   19.6   0.0   1.4e-06    0.0011       2      38 ..     178     214 ..     177     217 .. 0.93
   5 ?    5.7   0.1      0.04        31      11      34 ..     233     256 ..     224     269 .. 0.81
   6 ?    1.2   0.0       1.1   8.6e+02       3      22 ..     263     282 ..     261     292 .. 0.83
   7 !   11.1   0.4   0.00073      0.57       4      41 ..     298     335 ..     295     338 .. 0.90

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.006
      TPR_14  2 eallalaeallalGdpdeAiallrralalaPddaea 37
                e ++al+  +++  ++ eAi+++  a++l+ + a a
  EPX72786.1 24 EEQKALGNDFYRKKNFSEAIKAYTSAIELGSGTAKA 59
                6788999********************997665554 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 1.1
      TPR_14   8 aeallalGdpdeAiallrralal...aPddaeawl 39 
                 ae++l + +   A+++l+r+ ++   a +++++w 
  EPX72786.1 112 AEVYLKNKQGGLALNALDRLHRRldsAAKPPAVWS 146
                 67777777777777777777664111567777774 PP

  == domain 3  score: 8.4 bits;  conditional E-value: 0.0056
      TPR_14   2 eallal.aeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 +++  l a+++  + d+ +A +++   l+ +P + ea+ l +q
  EPX72786.1 143 AVWSYLkARVYICQNDLSQAQKIALGFLRENPRNVEALVLRGQ 185
                 56755549******************************99887 PP

  == domain 4  score: 19.6 bits;  conditional E-value: 1.4e-06
      TPR_14   2 eallalaeallalGdpdeAiallrralalaPddaeaw 38 
                 eal +++++l+ +G+ ++A++++++al+l+Pd a a 
  EPX72786.1 178 EALVLRGQVLYYSGENAKAVTHFQEALKLDPDCASAK 214
                 8999****************************99876 PP

  == domain 5  score: 5.7 bits;  conditional E-value: 0.04
      TPR_14  11 llalGdpdeAiallrralalaPdd 34 
                  + +G++d A +l+ +al+ + d+
  EPX72786.1 233 AFKQGKLDLAYELYSKALDIDADN 256
                 6789***************99887 PP

  == domain 6  score: 1.2 bits;  conditional E-value: 1.1
      TPR_14   3 allalaeallalGdpdeAia 22 
                 +++ +a +ll l +p+eA++
  EPX72786.1 263 LYMNRATVLLKLKKPEEALK 282
                 6778999***********97 PP

  == domain 7  score: 11.1 bits;  conditional E-value: 0.00073
      TPR_14   4 llalaeallalGdpdeAiallrralalaPddaeawlll 41 
                 l+ +a+a++al+++++A++  + a++l+ +d  ++ +l
  EPX72786.1 298 LKTRAKAHEALEQWEDAVRDIQSAIDLDAGDSSLRQEL 335
                 6789************************9999998776 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.1     0.028        22      13      30 ..      35      52 ..      29      52 .. 0.91
   2 ?    4.7   0.2     0.056        43       3      31 ..      61      89 ..      59      91 .. 0.85
   3 ?   -0.2   0.0       2.1   1.6e+03       5      24 ..     147     166 ..     146     176 .. 0.82
   4 !   17.2   0.0   5.4e-06    0.0042       2      34 .]     178     210 ..     177     210 .. 0.96
   5 !    8.8   0.3    0.0026         2      12      34 .]     234     256 ..     233     256 .. 0.93
   6 !   11.4   0.1   0.00038       0.3       1      32 [.     261     292 ..     261     294 .. 0.93
   7 ?   -0.7   0.0         3   2.4e+03       8      32 ..     302     326 ..     300     328 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.028
                HTT-HHHHHHHHHHHHHH CS
       TPR_8 13 klgdyeeAkeyyekalel 30
                 ++++ eA+++y  a+el
  EPX72786.1 35 RKKNFSEAIKAYTSAIEL 52
                689*************97 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.056
                HHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
       TPR_8  3 ayynlgsiylklgdyeeAkeyyekaleld 31
                +y n + +y+ +g++e A +  ++  +++
  EPX72786.1 61 YYSNRAATYMLMGEFELALSDAKQSDRYN 89
                68899*************99988876665 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 2.1
                 HHHHHHHHHTT-HHHHHHHH CS
       TPR_8   5 ynlgsiylklgdyeeAkeyy 24 
                 y+++++y+ ++d+ +A++  
  EPX72786.1 147 YLKARVYICQNDLSQAQKIA 166
                 8899***9999999999875 PP

  == domain 4  score: 17.2 bits;  conditional E-value: 5.4e-06
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldpdn 34 
                 ea+++ g+++   g+  +A+  +++al+ldpd+
  EPX72786.1 178 EALVLRGQVLYYSGENAKAVTHFQEALKLDPDC 210
                 8999***************************97 PP

  == domain 5  score: 8.8 bits;  conditional E-value: 0.0026
                 HHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8  12 lklgdyeeAkeyyekaleldpdn 34 
                 +k+g+++ A e y kal++d dn
  EPX72786.1 234 FKQGKLDLAYELYSKALDIDADN 256
                 689*****************986 PP

  == domain 6  score: 11.4 bits;  conditional E-value: 0.00038
                 CCHHHHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   1 aeayynlgsiylklgdyeeAkeyyekaleldp 32 
                 a++y+n + ++lkl++ eeA +    a+++d 
  EPX72786.1 261 AKLYMNRATVLLKLKKPEEALKDSDNAIQIDS 292
                 789*********************99999985 PP

  == domain 7  score: -0.7 bits;  conditional E-value: 3
                 HHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   8 gsiylklgdyeeAkeyyekaleldp 32 
                 +++++ l++ e A+  ++ a++ld 
  EPX72786.1 302 AKAHEALEQWEDAVRDIQSAIDLDA 326
                 7788899999999999999999996 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.1     0.026        20       5      44 ..      37      78 ..      33      84 .. 0.85
   2 ?    2.8   0.1      0.23   1.8e+02      32      57 ..     112     137 ..      96     152 .. 0.78
   3 !    7.6   0.5    0.0068       5.3       9      47 ..     126     165 ..     115     167 .. 0.85
   4 !   14.2   0.2   5.9e-05     0.046       4      59 ..     156     211 ..     156     215 .. 0.92
   5 !   19.6   0.7   1.2e-06   0.00096       1      45 [.     233     281 ..     233     282 .. 0.89
   6 ?    6.1   0.3     0.021        16       5      39 ..     309     343 ..     306     346 .. 0.92

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.026
      TPR_19  5 gdyaeAlalleqalqedpknaearl..lLAeallalgqldeA 44
                +++ eA++++++a++   + a a +  + A  ++ +g+++ A
  EPX72786.1 37 KNFSEAIKAYTSAIELGSGTAKAVYysNRAATYMLMGEFELA 78
                6899************99988888845559999999999987 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.23
      TPR_19  32 AeallalgqldeAealLdalpeedpd 57 
                 Ae++l+++q   A ++Ld+l +    
  EPX72786.1 112 AEVYLKNKQGGLALNALDRLHRRLDS 137
                 99****************99776554 PP

  == domain 3  score: 7.6 bits;  conditional E-value: 0.0068
      TPR_19   9 eAlalleqalqedpknaearllL.AeallalgqldeAeal 47 
                 +Al++l + l+ ++k ++++ +L A++++ +++l +A+++
  EPX72786.1 126 NALDRLHRRLDSAAKPPAVWSYLkARVYICQNDLSQAQKI 165
                 577778887788889899999888*************997 PP

  == domain 4  score: 14.2 bits;  conditional E-value: 5.9e-05
      TPR_19   4 egdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpdda 59 
                 ++d+ +A+++    l e+p n ea+ l  ++l+ +g+ ++A    +++++ dpd+a
  EPX72786.1 156 QNDLSQAQKIALGFLRENPRNVEALVLRGQVLYYSGENAKAVTHFQEALKLDPDCA 211
                 67899999999999999*************************************75 PP

  == domain 5  score: 19.6 bits;  conditional E-value: 1.2e-06
      TPR_19   1 llaegdyaeAlalleqalqedpk....naearllLAeallalgqldeAe 45 
                 ++++g+++ A +l+++al+ d++    na + ++ A +ll+l+ ++eA 
  EPX72786.1 233 AFKQGKLDLAYELYSKALDIDADnkftNAKLYMNRATVLLKLKKPEEAL 281
                 589***************99888887777777788*************7 PP

  == domain 6  score: 6.1 bits;  conditional E-value: 0.021
      TPR_19   5 gdyaeAlalleqalqedpknaearllLAeallalg 39 
                 ++ ++A++  ++a++ d++++ +r  L +++l+l+
  EPX72786.1 309 EQWEDAVRDIQSAIDLDAGDSSLRQELRRLQLELK 343
                 578999999***********************986 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0     0.098        77       7      51 ..      35      81 ..      33      84 .. 0.86
   2 !   13.3   0.0     9e-05      0.07       4      65 ..     152     213 ..     148     220 .. 0.91
   3 !   18.4   0.4   2.2e-06    0.0017       6      66 ..     272     332 ..     268     340 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.098
       TPR_9  7 reedweralavverllllaPddpeerr..dRGlllaqlGclsaAlad 51
                r++++++a++++ + + l + ++  ++   R+  ++ +G ++ Al d
  EPX72786.1 35 RKKNFSEAIKAYTSAIELGSGTAKAVYysNRAATYMLMGEFELALSD 81
                678889999999999999888888765559**************988 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 9e-05
       TPR_9   4 iaireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapdapda 65 
                 ++i ++d ++a +++   l  +P+ +e +  RG++l+ +G  ++A+  ++ +l l+pd + a
  EPX72786.1 152 VYICQNDLSQAQKIALGFLRENPRNVEALVLRGQVLYYSGENAKAVTHFQEALKLDPDCASA 213
                 46999999999999999****************************************96655 PP

  == domain 3  score: 18.4 bits;  conditional E-value: 2.2e-06
       TPR_9   6 ireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapdapdae 66 
                 +  ++ e+al+ ++  +++++  +  +  R+ +++ l++++ A++d + +++l+  +   +
  EPX72786.1 272 LKLKKPEEALKDSDNAIQIDSGYVKGLKTRAKAHEALEQWEDAVRDIQSAIDLDAGDSSLR 332
                 5667889*********************************************998555444 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.5     0.002       1.6       2      79 ..      36     116 ..      35     119 .. 0.84
   2 !   19.5   0.2   1.1e-06   0.00083       9      81 ..     125     202 ..     117     203 .. 0.82
   3 !   11.7   0.5    0.0003      0.23      21      76 ..     221     281 ..     213     287 .. 0.83
   4 !   14.6   0.7   3.6e-05     0.028       2      77 ..     236     316 ..     235     321 .. 0.84

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.002
                 TT-HHHHHHHHHHHH.HHH--HHHHHHH..HHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH CS
      ANAPC3   2 qnnyknAiflaerllaaetespedayll..AlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaL 79 
                 ++n+ +Ai  +  + +  +  ++++y+   A ++ l+g+++ A+  ++++ + ns+ ++    + q+l  L+ ++eA+  L
  EPX72786.1  36 KKNFSEAIKAYTSAIELGSGTAKAVYYSnrAATYMLMGEFELALSDAKQSdRYNSNVPKTQARIRQALEGLSVLNEAEVYL 116
                 679999*********999*********778********************7777777777777777777777777777666 PP

  == domain 2  score: 19.5 bits;  conditional E-value: 1.1e-06
                 HHHHHHHH.....HHH--HHH.....HHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH-S CS
      ANAPC3   9 iflaerll....aaetesped.....ayllAlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaLek 81 
                 +  ++rl+    +a            +yl+A ++  +++  +A++++  + ++n+++ ++++l +q+l+  ++  +A++++++
  EPX72786.1 125 LNALDRLHrrldSAA-----KppavwSYLKARVYICQNDLSQAQKIALGFlRENPRNVEALVLRGQVLYYSGENAKAVTHFQE 202
                 556677773222122.....12324589****************************************************987 PP

  == domain 3  score: 11.7 bits;  conditional E-value: 0.0003
                 --HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-H....HHHHHHHHHHHHTT-HHHHH CS
      ANAPC3  21 espedayllAlclylngqykrAyellrka.klnsksl....gcrylfAqcllkLkkyeeAi 76 
                 +s+e++ + +   +++g+ + Ayel++ka +++  ++    +  +  A +llkLkk eeA+
  EPX72786.1 221 RSLENTKAQGNDAFKQGKLDLAYELYSKAlDIDADNKftnaKLYMNRATVLLKLKKPEEAL 281
                 5677777788889*****************999999996544444557999*********8 PP

  == domain 4  score: 14.6 bits;  conditional E-value: 3.6e-05
                 TT-HHHHHHHHHHHH...HHH--HHH.HHHH.HHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHH CS
      ANAPC3   2 qnnyknAiflaerll..aaetesped.ayll.AlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAia 77 
                 q++++ A+ l++++l   a+++  ++ +y+  A +l+++++ ++A++  ++a +++s   + + + A++  +L+++e+A++
  EPX72786.1 236 QGKLDLAYELYSKALdiDADNKFTNAkLYMNrATVLLKLKKPEEALKDSDNAiQIDSGYVKGLKTRAKAHEALEQWEDAVR 316
                 66778899999999955255555555266648***********************************************86 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.1      0.48   3.7e+02      13      33 ..      59      79 ..      46      80 .. 0.87
   2 ?   -1.0   0.1         4   3.1e+03      17      34 .]     147     164 ..     147     164 .. 0.87
   3 !   10.5   0.0   0.00084      0.65       5      32 ..     169     196 ..     166     198 .. 0.91
   4 ?    0.7   0.0       1.2     9e+02       2      11 ..     200     209 ..     199     241 .. 0.89
   5 !   16.1   0.3   1.3e-05      0.01       1      33 [.     245     281 ..     245     282 .. 0.94
   6 ?    1.0   0.0      0.88   6.9e+02       4      33 ..     286     315 ..     285     316 .. 0.91
   7 ?   -1.7   0.0       6.4     5e+03      15      28 ..     368     384 ..     366     390 .. 0.68

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.48
      TPR_17 13 adaynnLAelllknGdlmtAr 33
                a+ y n+A ++   G+++ A+
  EPX72786.1 59 AVYYSNRAATYMLMGEFELAL 79
                67899*********9998885 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 4
      TPR_17  17 nnLAelllknGdlmtArq 34 
                 +++A+++  ++dl +A++
  EPX72786.1 147 YLKARVYICQNDLSQAQK 164
                 678999*99***999985 PP

  == domain 3  score: 10.5 bits;  conditional E-value: 0.00084
      TPR_17   5 aleldPnnadaynnLAelllknGdlmtA 32 
                 +l+ +P n++a+ +++++l+  G+ ++A
  EPX72786.1 169 FLRENPRNVEALVLRGQVLYYSGENAKA 196
                 5889****************99999988 PP

  == domain 4  score: 0.7 bits;  conditional E-value: 1.2
      TPR_17   2 ylkaleldPn 11 
                 +++al+ldP+
  EPX72786.1 200 FQEALKLDPD 209
                 89*******7 PP

  == domain 5  score: 16.1 bits;  conditional E-value: 1.3e-05
      TPR_17   1 lylkaleldPnn....adaynnLAelllknGdlmtAr 33 
                 ly kal++d +n    a++y n+A++llk++++++A+
  EPX72786.1 245 LYSKALDIDADNkftnAKLYMNRATVLLKLKKPEEAL 281
                 7999****99999999*******************97 PP

  == domain 6  score: 1.0 bits;  conditional E-value: 0.88
      TPR_17   4 kaleldPnnadaynnLAelllknGdlmtAr 33 
                 +a+++d  +++ +  +A++++ + ++++A+
  EPX72786.1 286 NAIQIDSGYVKGLKTRAKAHEALEQWEDAV 315
                 7999999******************99995 PP

  == domain 7  score: -1.7 bits;  conditional E-value: 6.4
      TPR_17  15 aynnLAelll...knGd 28 
                 ay  +A +++   ++Gd
  EPX72786.1 368 AYRKMALVYHpdkNAGD 384
                 78999999997755554 PP

>> TPR_15  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.1      0.37   2.9e+02     195     247 ..      35      92 ..      17     115 .. 0.77
   2 ?   -1.1   0.0       1.1   8.8e+02      12      47 ..     109     145 ..      91     166 .. 0.70
   3 !    9.0   0.0   0.00093      0.72     148     181 ..     179     212 ..     157     218 .. 0.88
   4 ?   -1.1   0.0       1.1   8.7e+02     158     184 ..     235     260 ..     230     266 .. 0.77
   5 ?    0.6   0.0      0.33   2.6e+02     145     175 ..     260     290 ..     244     296 .. 0.72
   6 !   14.3   1.2   2.3e-05     0.018     149     196 ..     298     345 ..     279     375 .. 0.81

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.37
      TPR_15 195 rraeLrellkawkara.....esdasLwgplaaAlllLgrpkkALeylrkqakenrkd 247
                 r+++  e++ka+  +       ++a+++   aa ++l+g+ + AL   ++  + n++ 
  EPX72786.1  35 RKKNFSEAIKAYTSAIelgsgTAKAVYYSNRAATYMLMGEFELALSDAKQSDRYNSNV 92 
                 5566677888888777788878888888888999999999999997666666656555 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 1.1
      TPR_15  12 lklatllykqgdvkkAlevLkeaaqkaapskdt..eyW 47 
                 l+ a++ +k+++   Al++L++   + + s+++  ++W
  EPX72786.1 109 LNEAEVYLKNKQGGLALNALDRLHRRLD-SAAKppAVW 145
                 4458888888888888888876555554.333335444 PP

  == domain 3  score: 9.0 bits;  conditional E-value: 0.00093
      TPR_15 148 fllaraelyrqegqtdaAlrdyreAlalapdsse 181
                  l++r+++    g++++A++ ++eAl+l+pd ++
  EPX72786.1 179 ALVLRGQVLYYSGENAKAVTHFQEALKLDPDCAS 212
                 6899**************************9554 PP

  == domain 4  score: -1.1 bits;  conditional E-value: 1.1
      TPR_15 158 qegqtdaAlrdyreAlalapdsselra 184
                 ++g+ d A ++y +Al+ ++d++ + +
  EPX72786.1 235 KQGKLDLAYELYSKALDIDADNK-FTN 260
                 689999999*******9999854.444 PP

  == domain 5  score: 0.6 bits;  conditional E-value: 0.33
      TPR_15 145 saafllaraelyrqegqtdaAlrdyreAlal 175
                 +a  ++ ra + ++  ++++Al+d  +A++ 
  EPX72786.1 260 NAKLYMNRATVLLKLKKPEEALKDSDNAIQI 290
                 4556677777777777777777777777765 PP

  == domain 6  score: 14.3 bits;  conditional E-value: 2.3e-05
      TPR_15 149 llaraelyrqegqtdaAlrdyreAlalapdsselraallWlliDlgrr 196
                 l  ra+++++  q+++A+rd++ A++l++++s+lr++l  l ++l++ 
  EPX72786.1 298 LKTRAKAHEALEQWEDAVRDIQSAIDLDAGDSSLRQELRRLQLELKKS 345
                 6789********************************996666666655 PP

>> TPR_MalT  MalT-like TPR region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.2     0.041        32      80     144 ..     105     165 ..      35     171 .. 0.52
   2 !   20.7   0.2   2.9e-07   0.00023       6     152 ..     148     291 ..     143     339 .. 0.75

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.041
    TPR_MalT  80 llallqqaeilvaqGrLheAletyeqalqlateqglqqlplvgfllvlladllyEwndLeeAeqh 144
                  l++l  ae++ +  +   Al+   +  +  + +     p + + + + a++++ +ndL +A++ 
  EPX72786.1 105 GLSVLNEAEVYLKNKQGGLALNALDRLHRRLDSAAK---PPAVWSYLK-ARVYICQNDLSQAQKI 165
                 455555555444333223333333332222222222...223333333.6666666666666665 PP

  == domain 2  score: 20.7 bits;  conditional E-value: 2.9e-07
    TPR_MalT   6 lrAllaiasgdaeralelArqALallpeddllariaatavlGeasllqGdleaAlqalqeaekl...arqadslhv...allallqqaeilvaqGrLhe 98 
                 l+A ++i ++d  +a+++A  +L   +e+     + a+ + G +  + G+ ++A+ ++qea kl     +a+ +     +l  +  q++ +++qG+L+ 
  EPX72786.1 148 LKARVYICQNDLSQAQKIALGFL---RENP--RNVEALVLRGQVLYYSGENAKAVTHFQEALKLdpdCASAKIFFKrvrSLENTKAQGNDAFKQGKLDL 241
                 899**********9999975555...5554..445777899*********************995553444444332345777779************* PP

    TPR_MalT  99 AletyeqalqlateqglqqlplvgfllvlladllyEwndLeeAeqhlqeGiell 152
                 A+e+y +al    +++ ++      l+  +a +l+   + eeA +  +++i++ 
  EPX72786.1 242 AYELYSKALDIDADNKFTN----AKLYMNRATVLLKLKKPEEALKDSDNAIQID 291
                 *********9766666665....3444556666666666666666666666665 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0      0.23   1.8e+02      10      28 ..      33      51 ..      28      52 .. 0.80
   2 ?   -0.2   0.0       2.5     2e+03       6      28 ..     111     133 ..     107     134 .. 0.82
   3 ?    0.9   0.0       1.1   8.9e+02       4      32 ..     147     175 ..     144     176 .. 0.73
   4 !   10.8   0.0   0.00083      0.65       1      32 [.     178     209 ..     178     209 .. 0.90
   5 ?    1.5   0.1      0.74   5.8e+02      11      29 ..     234     252 ..     228     256 .. 0.83
   6 ?   -0.3   0.0       2.7   2.1e+03       4      21 ..     265     282 ..     263     290 .. 0.72
   7 ?    2.0   0.1       0.5   3.9e+02       7      28 ..     302     323 ..     301     326 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.23
                HHHHHHHHHHHHHHHHHHH CS
       TPR_6 10 yrklgdtdkAlealerlik 28
                +++ ++ ++A++a+ + i+
  EPX72786.1 33 FYRKKNFSEAIKAYTSAIE 51
                55656*********99886 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 2.5
                 HHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   6 lalsyrklgdtdkAlealerlik 28 
                  a+ y+k ++   Al al+rl +
  EPX72786.1 111 EAEVYLKNKQGGLALNALDRLHR 133
                 588999988999999***99976 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 1.1
                 HHHHHHHHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6   4 yklalsyrklgdtdkAlealerlikeYPd 32 
                 y+ a+ y+ ++d ++A ++   +++e P 
  EPX72786.1 147 YLKARVYICQNDLSQAQKIALGFLRENPR 175
                 45556666448*******99888888885 PP

  == domain 4  score: 10.8 bits;  conditional E-value: 0.00083
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6   1 dAlyklalsyrklgdtdkAlealerlikeYPd 32 
                 +Al ++++ ++  g+ +kA++ +++ +k  Pd
  EPX72786.1 178 EALVLRGQVLYYSGENAKAVTHFQEALKLDPD 209
                 7999***8888866**************9997 PP

  == domain 5  score: 1.5 bits;  conditional E-value: 0.74
                 HHHHHHHHHHHHHHHHHHH CS
       TPR_6  11 rklgdtdkAlealerlike 29 
                 +k+g+ d A e++ + ++ 
  EPX72786.1 234 FKQGKLDLAYELYSKALDI 252
                 7889*********999875 PP

  == domain 6  score: -0.3 bits;  conditional E-value: 2.7
                 HHHHHHHHHHHHHHHHHH CS
       TPR_6   4 yklalsyrklgdtdkAle 21 
                 +++a  ++kl+++++Al+
  EPX72786.1 265 MNRATVLLKLKKPEEALK 282
                 577888888878888875 PP

  == domain 7  score: 2.0 bits;  conditional E-value: 0.5
                 HHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   7 alsyrklgdtdkAlealerlik 28 
                 a+++++l ++++A++  ++ i+
  EPX72786.1 302 AKAHEALEQWEDAVRDIQSAID 323
                 89999988******98888776 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0      0.14   1.1e+02       4      28 ..      28      52 ..      27      58 .. 0.80
   2 ?    2.2   0.1      0.29   2.2e+02       2      20 ..      62      80 ..      61      85 .. 0.87
   3 ?   -0.5   0.1       2.1   1.6e+03       1      12 [.     124     135 ..     124     136 .. 0.91
   4 ?   -2.5   0.0       9.4   7.4e+03       6      18 ..     150     162 ..     147     164 .. 0.86
   5 !    8.4   0.0     0.003       2.3       2      33 ..     180     209 ..     179     213 .. 0.79
   6 ?    1.9   0.1      0.35   2.7e+02      10      30 ..     234     254 ..     228     258 .. 0.81
   7 ?    5.0   0.1     0.038        30       6      34 ..     302     328 ..     298     330 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.14
       TPR_7  4 nLarlysrlGdyeeAielyeqsLal 28
                +L++ + r  +++eAi+ y+ +++l
  EPX72786.1 28 ALGNDFYRKKNFSEAIKAYTSAIEL 52
                57777778889*********95554 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.29
       TPR_7  2 LlnLarlysrlGdyeeAie 20
                ++n a +y  +G++e A++
  EPX72786.1 62 YSNRAATYMLMGEFELALS 80
                6899***********9986 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 2.1
       TPR_7   1 aLlnLarlysrl 12 
                 aL++L rl++rl
  EPX72786.1 124 ALNALDRLHRRL 135
                 79********97 PP

  == domain 4  score: -2.5 bits;  conditional E-value: 9.4
       TPR_7   6 arlysrlGdyeeA 18 
                 ar+y  ++d ++A
  EPX72786.1 150 ARVYICQNDLSQA 162
                 8999999*99998 PP

  == domain 5  score: 8.4 bits;  conditional E-value: 0.003
       TPR_7   2 LlnLarlysrlGdyeeAielyeqsLaltkdpe 33 
                 L+  +++    G+ ++A++++++  al  dp+
  EPX72786.1 180 LVLRGQVLYYSGENAKAVTHFQE--ALKLDPD 209
                 66677888889************..6666665 PP

  == domain 6  score: 1.9 bits;  conditional E-value: 0.35
       TPR_7  10 srlGdyeeAielyeqsLaltk 30 
                 +++G+ + A ely ++L ++ 
  EPX72786.1 234 FKQGKLDLAYELYSKALDIDA 254
                 689************776654 PP

  == domain 7  score: 5.0 bits;  conditional E-value: 0.038
       TPR_7   6 arlysrlGdyeeAielyeqsLaltkdped 34 
                 a ++++l ++e+A++  +   a++ d +d
  EPX72786.1 302 AKAHEALEQWEDAVRDIQS--AIDLDAGD 328
                 899***********99888..77777665 PP

>> MIT  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.2    0.0013         1      17      33 ..      36      52 ..      26      66 .. 0.92
   2 ?   -1.4   0.0       3.3   2.6e+03       3      15 ..     195     207 ..     194     215 .. 0.58
   3 ?    6.3   0.1     0.013        10      16      32 ..     235     251 ..     227     252 .. 0.90
   4 ?   -0.8   0.0       2.2   1.7e+03       7      24 ..     264     281 ..     259     290 .. 0.60
   5 ?    3.5   0.1     0.097        75      19      51 ..     303     337 ..     299     344 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0013
         MIT 17 agnyeeAlelYkealel 33
                ++n++eA+++Y++a+el
  EPX72786.1 36 KKNFSEAIKAYTSAIEL 52
                89*************97 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 3.3
         MIT   3 kAlelvkkAveeD 15 
                 kA+  +++A ++D
  EPX72786.1 195 KAVTHFQEALKLD 207
                 4444455554444 PP

  == domain 3  score: 6.3 bits;  conditional E-value: 0.013
         MIT  16 nagnyeeAlelYkeale 32 
                 ++g+ + A+elY++al+
  EPX72786.1 235 KQGKLDLAYELYSKALD 251
                 57999**********98 PP

  == domain 4  score: -0.8 bits;  conditional E-value: 2.2
         MIT   7 lvkkAveeDnagnyeeAl 24 
                 + ++A+ + + ++ eeAl
  EPX72786.1 264 YMNRATVLLKLKKPEEAL 281
                 455555555666666665 PP

  == domain 5  score: 3.5 bits;  conditional E-value: 0.097
         MIT  19 nyeeAlelYkealelLlqalk.e.kneerrellre 51 
                 +  eAle  ++a++ ++ a+     +++ r+ lr+
  EPX72786.1 303 KAHEALEQWEDAVRDIQSAIDlDaGDSSLRQELRR 337
                 5679****************976777777777765 PP

>> TPR_3  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.1   0.00096      0.74       5      26 ..      27      46 ..      24      53 .. 0.88
   2 ?    4.9   0.3     0.035        27      13      28 ..     235     248 ..     230     256 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00096
                HHHHHHHHHTT-HHHHHHH..H CS
       TPR_3  5 ysyAaefynkkkyqeArelfsY 26
                ++++ +fy kk+++eA+ +  Y
  EPX72786.1 27 KALGNDFYRKKNFSEAIKA--Y 46
                68999*************9..5 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.035
                 HTT-HHHHHHH..HHH CS
       TPR_3  13 nkkkyqeArelfsYal 28 
                  ++k++ A+el+s   
  EPX72786.1 235 KQGKLDLAYELYS--K 248
                 69*********88..5 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0       1.6   1.2e+03       8      30 ..      29      51 ..      28      52 .. 0.86
   2 ?    4.2   0.2     0.054        42       2      27 ..      59      84 ..      59      85 .. 0.88
   3 ?   -2.4   0.0       6.6   5.2e+03       9      24 ..     150     165 ..     150     166 .. 0.71
   4 ?    5.4   0.1     0.022        17       9      30 ..     184     205 ..     179     206 .. 0.92
   5 ?   -2.5   0.0       6.7   5.2e+03      10      30 ..     231     251 ..     230     252 .. 0.76
   6 ?    4.4   0.0     0.048        37       5      31 ..     264     290 ..     261     290 .. 0.88
   7 ?    0.0   0.1       1.1   8.6e+02      12      28 ..     305     321 ..     298     324 .. 0.56

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 1.6
      TPR_10  8 LanalrqrgrydeAealleeala 30
                L+n  ++ +++ eA + +  a++
  EPX72786.1 29 LGNDFYRKKNFSEAIKAYTSAIE 51
                89999999******999888776 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.054
      TPR_10  2 AsslnNLanalrqrgrydeAeallee 27
                A  ++N a+++  +g+++ A+ ++++
  EPX72786.1 59 AVYYSNRAATYMLMGEFELALSDAKQ 84
                5679****************998877 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 6.6
      TPR_10   9 analrqrgrydeAeal 24 
                 a+++  ++++ +A ++
  EPX72786.1 150 ARVYICQNDLSQAQKI 165
                 6778888888887765 PP

  == domain 4  score: 5.4 bits;  conditional E-value: 0.022
      TPR_10   9 analrqrgrydeAealleeala 30 
                 + +l+  g+ ++A+ +++eal 
  EPX72786.1 184 GQVLYYSGENAKAVTHFQEALK 205
                 789*****************96 PP

  == domain 5  score: -2.5 bits;  conditional E-value: 6.7
      TPR_10  10 nalrqrgrydeAealleeala 30 
                 n  +++g++d A +l+ +al+
  EPX72786.1 231 NDAFKQGKLDLAYELYSKALD 251
                 566789999998888888886 PP

  == domain 6  score: 4.4 bits;  conditional E-value: 0.048
      TPR_10   5 lnNLanalrqrgrydeAealleealai 31 
                 + N a +l ++++ +eA+++ + a++i
  EPX72786.1 264 YMNRATVLLKLKKPEEALKDSDNAIQI 290
                 8899***************99888876 PP

  == domain 7  score: 0.0 bits;  conditional E-value: 1.1
      TPR_10  12 lrqrgrydeAealleea 28 
                 + ++ ++++A+++ + a
  EPX72786.1 305 HEALEQWEDAVRDIQSA 321
                 44455556666655555 PP

>> SHNi-TPR  SHNi-TPR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.0     0.011       8.9      16      30 ..      38      52 ..      33      52 .. 0.95
   2 ?    0.0   0.0      0.76   5.9e+02      20      30 ..     196     206 ..     195     206 .. 0.92
   3 ?   -1.6   0.1       2.4   1.9e+03      18      30 ..     278     290 ..     278     290 .. 0.88
   4 ?    2.9   0.0     0.099        77      15      30 ..     309     324 ..     308     324 .. 0.93

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.011
    SHNi-TPR 16 nFpqAveDlrkaLeL 30
                nF++A++ +++a+eL
  EPX72786.1 38 NFSEAIKAYTSAIEL 52
                9************98 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.76
    SHNi-TPR  20 AveDlrkaLeL 30 
                 Av+ +++aL+L
  EPX72786.1 196 AVTHFQEALKL 206
                 9999*****98 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 2.4
    SHNi-TPR  18 pqAveDlrkaLeL 30 
                 ++A++D + a+++
  EPX72786.1 278 EEALKDSDNAIQI 290
                 69*****999987 PP

  == domain 4  score: 2.9 bits;  conditional E-value: 0.099
    SHNi-TPR  15 enFpqAveDlrkaLeL 30 
                 e+ ++Av D ++a++L
  EPX72786.1 309 EQWEDAVRDIQSAIDL 324
                 889**********987 PP

>> DUF4192  Domain of unknown function (DUF4192)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.1    0.0027       2.1     266     305 ..     174     213 ..      15     221 .. 0.85
   2 ?    2.7   0.2      0.14   1.1e+02     193     239 ..     299     350 ..     266     372 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0027
     DUF4192 266 plrAaalaLlAvvawarGdgalAgvaLeaAleadPghsla 305
                 p   +al+L + v + +G+ a+A  + + Al++dP++  a
  EPX72786.1 174 PRNVEALVLRGQVLYYSGENAKAVTHFQEALKLDPDCASA 213
                 55789******************************98755 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.14
     DUF4192 193 dpaevrraaleavraalarvaagaglsda.....eeaarlavaLtdvrvRDa 239
                 + ++ +++ale++++a+++++++ +l++      +e+ rl + L++++ +D 
  EPX72786.1 299 KTRAKAHEALEQWEDAVRDIQSAIDLDAGdsslrQELRRLQLELKKSQRKDH 350
                 4567789999999999999999777666677888999999999988887776 PP

>> TPR_20  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.0     0.002       1.6      15      55 ..     170     210 ..     160     236 .. 0.91
   2 ?    0.6   0.3      0.93   7.3e+02      12      58 ..     251     297 ..     241     321 .. 0.73
   3 ?   -1.0   0.1       2.9   2.3e+03      30      70 ..     357     397 ..     328     404 .. 0.64

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.002
      TPR_20  15 laanpddldarldlAlallaagryeeAleqLleilkrdrkw 55 
                 l +np +++a +   ++l+  g++++A++++ e lk d + 
  EPX72786.1 170 LRENPRNVEALVLRGQVLYYSGENAKAVTHFQEALKLDPDC 210
                 568*******************************9988765 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.93
      TPR_20  12 eaalaanpddldarldlAlallaagryeeAleqLleilkrdrkwedd 58 
                 + ++ ++ ++ ++ ++ A++ll+ ++ eeAl+   + ++ d+++ ++
  EPX72786.1 251 DIDADNKFTNAKLYMNRATVLLKLKKPEEALKDSDNAIQIDSGYVKG 297
                 55666677888899999999999999999998877777777777444 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 2.9
      TPR_20  30 lallaagryeeAleqLleilkrdrkweddaarkqllkifea 70 
                  + +   + ++A  ++  +   d+++ d++a  ++ ++ ea
  EPX72786.1 357 SKEATDTEIKKAYRKMALVYHPDKNAGDEKAEAKFKEVGEA 397
                 34455667788888888888888888888887777666555 PP

>> SRP_TPR_like  Putative TPR-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.3     0.021        17      48      97 ..     146     199 ..      44     211 .. 0.77
   2 ?    5.7   0.7     0.018        14      28      66 ..     244     282 ..     239     366 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.021
  SRP_TPR_like  48 rfEkaYvlYklkkykkalki....lkkveaeekvkvlksqvlYrlgsyekAYkl 97 
                    + ka v+   + + +a+ki    l++   + ++ vl+ qvlY+ g+ +kA   
    EPX72786.1 146 SYLKARVYICQNDLSQAQKIalgfLRENPRNVEALVLRGQVLYYSGENAKAVTH 199
                   45666666666777777776433255555555778999*******999998654 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.018
  SRP_TPR_like  28 ekyeeaLkllkkgsalsedvrfEkaYvlYklkkykkalk 66 
                   e y+ aL + ++++ ++ ++ + +a vl klkk ++alk
    EPX72786.1 244 ELYSKALDIDADNKFTNAKLYMNRATVLLKLKKPEEALK 282
                   668888888888888888888888888888888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (481 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       834  (0.0465168); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                        24  (0.00133861); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              23  [number of targets reported over threshold]
# CPU time: 0.69u 0.27s 00:00:00.96 Elapsed: 00:00:00.53
# Mc/sec: 2742.60
//
Query:       EPX72787.1  [L=371]
Description: septin Spn3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   1.9e-106  355.5   0.0   2.6e-106  355.0   0.0    1.1  1  Septin       Septin
  ------ inclusion threshold ------
       0.03   14.7   0.1       0.15   12.4   0.0    2.1  2  AAA_16       AAA ATPase domain
      0.054   13.3   0.5       0.53   10.1   0.0    2.4  2  T6SS_VipA    Type VI secretion system, VipA, VC_A0107 or Hcp2
      0.061   12.6   0.0       0.14   11.5   0.0    1.7  1  AIG1         AIG1 family
      0.079   13.0   0.0        0.2   11.8   0.0    1.8  1  MMR_HSR1     50S ribosome-binding GTPase
       0.08   12.8   0.0         12    5.8   0.0    2.6  2  RsgA_GTPase  RsgA GTPase


Domain annotation for each model (and alignments):
>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  355.0   0.0  8.6e-110  2.6e-106       1     278 [.      10     291 ..      10     294 .. 0.95

  Alignments for each domain:
  == domain 1  score: 355.0 bits;  conditional E-value: 8.6e-110
                 XEEEEEEEEEEBTTSSCCCCCCTTSSSS----.--------.------S-E.EEEEEEEETTCEEEEEEEE---BSSSSSHHCCCHHHHHHHHHHHHHH CS
      Septin   1 kgieftlmvvGesglGkttlintlfetdliee.ekleease.kkkktveik.kkkvvieedgvklnltviDtpgfGdavdnskswepiveyideqfeey 96 
                 kg+ f+l+vvG+ glG+++++ntl+e+ li++ +++ ++s   +++ vei   +++++ edg+++ ltv+Dtp+f +a+dn++++++i++y+++q++++
  EPX72787.1  10 KGVPFNLLVVGDAGLGRSAFVNTLCEKPLIKKdNTHFDPSMaASMSPVEIVpYQTDIVLEDGFRISLTVLDTPHFNEAIDNENNFDIILQYLESQYDNV 108
                 799**************************998434445554488999***97889999***************************************** PP

                 HHHCTSS--.SS-----EEEEEEEE-TTSSSS-HHHHHHHHHHTTTS-EEEEESSGGGS-HHHHHHHHHHHHHHHHHTT--------SSSS-SCCHHHH CS
      Septin  97 lreesklkR.kkivDkRvHaclyfisPtghglkpldvelmkklsekvnliPviaKaDtltkeElkefKkkireeleeeeikiyklpdeeededeeakel 194
                 l+ee+++kR +k++D+RvHa++yfisPtghgl++ld+elmk+l+ +vn+iPviaKaD+lt+eElke+Kk+i ++++ ++i++y++p  ee+++e+ ++l
  EPX72787.1 109 LEEETRIKRnAKFSDERVHALIYFISPTGHGLRELDIELMKRLAPRVNVIPVIAKADSLTAEELKETKKMILDDIAYYHIPVYNFPYDEEEDEEALVSL 207
                 *********999************************************************************************888888888999*** PP

                 HHHHHHC-SEEB-SSSSEEEESSSEEEEEEETTEEEETT-TTT-SCCHHHHHHHHHCHHHHHHHHHHTHHHHHHHHHH-XXXXX CS
      Septin 195 seklkeslPfaivgsneliekkgkkvrgRkypWGvvevenekhsdFlkLrklllkthledLkevteellYetyRseklsklkek 278
                 s++l++++Pfaiv+s++l+e  g+++rgR ypWGvv+v+n++hsdFl+Lr+++++thledL+++t+++lYe yR+ekls+++ +
  EPX72787.1 208 SKSLRSKMPFAIVSSDRLVEIGGNTIRGRVYPWGVVDVDNPSHSDFLALRSAIFSTHLEDLQSITNNQLYESYRTEKLSASHLA 291
                 ******************************************************************************998765 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0     5e-05      0.15      17      63 ..       6      49 ..       1     168 [. 0.75
   2 ?   -0.3   0.2       0.4   1.2e+03      75     116 ..     308     347 ..     270     361 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 5e-05
      AAA_16 17 ervrsgrpelvllsGesGvGKsslvrellr.alekdggiflrgkcdql 63
                ++ ++g p ++l++G++G G s+ v++l + +l k+     ++++d +
  EPX72787.1  6 KTSKKGVPFNLLVVGDAGLGRSAFVNTLCEkPLIKK----DNTHFDPS 49
                55667777899**************99886555555....35555555 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.4
      AAA_16  75 alareellrqlldeaesaeleawrekleealaavpelagaea 116
                 +l re+ lr+++   +  e e+ r++l+++ +a ++l+ ++a
  EPX72787.1 308 VL-REDRLRAIELSVQR-EIEEKRRQLLAREEALRALEEKIA 347
                 44.55666666666444.666666666666665555555555 PP

>> T6SS_VipA  Type VI secretion system, VipA, VC_A0107 or Hcp2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00018      0.53      17      67 ..       3      53 ..       1      78 [. 0.89
   2 ?    0.4   0.3      0.17     5e+02     105     132 ..     323     351 ..     306     357 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00018
                T--TT------EEEEEEC--SSS..--SS-TTTS--EEE-TTSHHHHHHHH CS
   T6SS_VipA 17 tggaeekveLPfkllvlgDfsgkseeekkkleerkfveidkdnfdevlkei 67
                t  +++k+ +Pf llv+gD   ++++  ++l e+  ++ d+ +fd  +++ 
  EPX72787.1  3 TAKKTSKKGVPFNLLVVGDAGLGRSAFVNTLCEKPLIKKDNTHFDPSMAAS 53
                566788999**************99********************999864 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.17
                 CC-HHH.HHHHHHHHHHHHHHTTTTTXTT CS
   T6SS_VipA 105 eqvpeL.kkLlelReaLadLkskldnkek 132
                 ++++e  ++Ll+  eaL++L++k+  +++
  EPX72787.1 323 REIEEKrRQLLAREEALRALEEKIAASTA 351
                 45544315677777889999988877665 PP

>> AIG1  AIG1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   4.7e-05      0.14       2      64 ..      15      89 ..      14     136 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 4.7e-05
                EEEEESSTTSSHHHHHHHHHTS--.......SS--TTTS..---SS-.EEEEEEETT..EEEEEEE--SCCCTTC CS
        AIG1  2 tivlvGktgnGkSaTgNsilgkka.......Fesklsaq..svtkkc.qkksrtwdg..kkinViDTPglfdlsv 64
                ++++vG  g G+Sa +N++ +k         F+ +++a+  +v   + q+    +dg   ++ V DTP   +  +
  EPX72787.1 15 NLLVVGDAGLGRSAFVNTLCEKPLikkdnthFDPSMAASmsPVEIVPyQTDIVLEDGfrISLTVLDTPHFNEAID 89
                79*****************66555455557788776554114544431444447888334567999998766544 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   6.7e-05       0.2       2     101 ..      16     151 ..      15     180 .. 0.58

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 6.7e-05
                 EEEEESTTSSHHHHHHHHHT...........STEEESSSTTSSSSEEEEEEE........ETT..EEEEEEECGGC....................... CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltg...........ekaivsdkpgtTrdinegrvk........lkg..keielvDtpGl....................... 56 
                  ++vG    G S ++n+l++           +       p     +   ++         ++g   +++++Dtp +                       
  EPX72787.1  16 LLVVGDAGLGRSAFVNTLCEkplikkdnthfD-------PSMAASMSPVEIVpyqtdivlEDGfrISLTVLDTPHFneaidnennfdiilqylesqydn 107
                 579****************9333322222220.......222222222222222222222122225699*****9766667777766665554444222 PP

                 .SSHHHHHHHHHHHHHHHHCTSEEEEEEETTTTCSHHHHHHHHHHH CS
    MMR_HSR1  57 .iegaseekglgkaflaleeadlillvvdaseeklkpldeeleell 101
                  +e  +e +  ++a  + e+++++++ ++ + ++l++ld el + l
  EPX72787.1 108 vLE--EETRIKRNAKFSDERVHALIYFISPTGHGLRELDIELMKRL 151
                 112..22223455555567788888888755557877777776665 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0     0.004        12     103     122 ..      17      36 ..       8      48 .. 0.87
   2 ?    4.1   0.0     0.013        39      38      80 ..     146     188 ..     127     220 .. 0.62

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.004
                  EEECSTTSSHHHHHHHHCTT CS
  RsgA_GTPase 103 vlvGqSGvGKStLinallpe 122
                  ++vG  G G+S+++n+l ++
   EPX72787.1  17 LVVGDAGLGRSAFVNTLCEK 36 
                  689**************876 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.013
                  HHHHHHHTT-EEEEEEE-GGG--HHHHHHHHHHHHHHTTSEEE CS
  RsgA_GTPase  38 fLvlaeekgiepvivlnKiDlleeeeeleelkeelealgyevl 80 
                   L+   + +++++ v+ K+D l+ ee  e+ k  l ++ y  +
   EPX72787.1 146 ELMKRLAPRVNVIPVIAKADSLTAEELKETKKMILDDIAYYHI 188
                  56666677899999***********933333444444443322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (371 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       939  (0.0523733); expected 358.6 (0.02)
Passed bias filter:                      493  (0.0274974); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.52u 0.23s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 2767.38
//
Query:       EPX72788.1  [L=352]
Description: trans-2-enoyl-CoA reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.7e-19   67.8   0.1    2.4e-18   66.4   0.0    1.9  2  ADH_zinc_N       Zinc-binding dehydrogenase
    2.4e-17   64.2   0.0      5e-17   63.2   0.0    1.6  1  ADH_zinc_N_2     Zinc-binding dehydrogenase
    5.9e-11   42.2   0.0    1.5e-10   41.0   0.0    1.7  1  ADH_N            Alcohol dehydrogenase GroES-like domain
    6.7e-05   22.3   1.9    0.00079   18.8   0.7    2.2  2  AlaDh_PNT_C      Alanine dehydrogenase/PNT, C-terminal domain
    0.00059   19.4   0.0     0.0008   18.9   0.0    1.2  1  Epimerase        NAD dependent epimerase/dehydratase family
     0.0017   18.1   0.4     0.0032   17.2   0.4    1.3  1  ELFV_dehydrog    Glutamate/Leucine/Phenylalanine/Valine dehyd
      0.006   16.3   0.6        1.7    8.4   0.0    2.9  3  Met_10           Met-10+ like-protein
  ------ inclusion threshold ------
       0.37   10.6   2.6       0.35   10.7   0.4    2.0  2  Eno-Rase_NADH_b  NAD(P)H binding domain of trans-2-enoyl-CoA 


Domain annotation for each model (and alignments):
>> ADH_zinc_N  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0         2   4.4e+03      28      52 ..     146     168 ..     123     179 .. 0.49
   2 !   66.4   0.0   1.1e-21   2.4e-18       1     124 [.     182     297 ..     182     328 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 2
                 HHHHHTTESEEEETTTCHHHHHHHH CS
  ADH_zinc_N  28 elakklGadevinykeadlverike 52 
                   a+ +G   v  + e  lve++k 
  EPX72788.1 146 NDAAAFGTAGVTAW-E-GLVEHMKI 168
                 45666666666666.3.35555554 PP

  == domain 2  score: 66.4 bits;  conditional E-value: 1.1e-21
                 HHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTESEEEETTTCHHHHHHHHHTTTSSEEEEEESSCSHHHHHHHHHCEEEEEEEEECSCTSSEEEEEH CS
  ADH_zinc_N   1 gvGlaavqlAkalGaeviavdsseeklelakklGadevinykeadlverikeltggegvdvvfecvGsgatleaalkllkpgGrlvvvGggkgeeefdl 99 
                 gvG++a+q+AkalGaev+ ++s+++ ++l+k+lGa ++i+yk++d+v++++e     ++d+vf+ ++++  ++a+ k++k+ G ++ ++      +++l
  EPX72788.1 182 GVGTFAIQIAKALGAEVTSISSTKN-IQLCKSLGAFHTIDYKSEDVVAKLAETG---PYDFVFDLINDNGLYRASSKFMKREGSFFGIAS-----DISL 271
                 9*********************995.***************5547777777666...******************************994.....4777 PP

                 HHHH.HTT-EEEEE-SSCHHHHHHHH CS
  ADH_zinc_N 100 rnll.lkeksilGsllgslreefkea 124
                 +++    +++++  ++g+ ++++ ++
  EPX72788.1 272 SYIGsVMSRKMRPKIFGGSSNAYHDF 297
                 77776777777777777766666654 PP

>> ADH_zinc_N_2  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.2   0.0   2.2e-20     5e-17       1     133 []     213     349 ..     213     349 .. 0.85

  Alignments for each domain:
  == domain 1  score: 63.2 bits;  conditional E-value: 2.2e-20
                   TT-SEEEETTSTTHH.HHH-TT-EEEEEES-HHHHH.HHHHHHEEEEEEEEE----........S-EEE-CHHHCTTT-EEEE--GGG...-.-HHH CS
  ADH_zinc_N_2   1 lGAdevidyrtedfe.aatggegvDvvldtvggealleaslkvlpggGrlvsiggpp.......lsaallkpakkrkgrsvkyeflfsmkasaqadi 89 
                   lGA + idy++ed++ + ++ + +D v+d+++ + l++as k+++ +G +  i++++       + ++ ++p+   +g s  y+ +++ +a+ ++  
    EPX72788.1 213 LGAFHTIDYKSEDVVaKLAETGPYDFVFDLINDNGLYRASSKFMKREGSFFGIASDIslsyigsVMSRKMRPKI-FGGSSNAYHDFLE-QAT-PEA- 305
                   8*********9999986666689*********77777*******777*******98999999985555555555.3566677777774.566.667. PP

                   HHHHHHHHHHHH----EEEEEEGGGHHHHHHHHHSS--SSEEEE CS
  ADH_zinc_N_2  90 leelaalieeGklrpvvdrvfpleeaaeAhrylesgrarGKiVl 133
                   ++   ++++++k+++v+d+v+ ++ a +A+++++s+r  G +++
    EPX72788.1 306 IKNFSNFVAKNKVETVIDSVYNFDHALDAFERVASHRSQGNVIV 349
                   *****************************************997 PP

>> ADH_N  Alcohol dehydrogenase GroES-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.0   0.0   6.5e-14   1.5e-10       1      69 [.      48     119 ..      48     177 .. 0.84

  Alignments for each domain:
  == domain 1  score: 41.0 bits;  conditional E-value: 6.5e-14
                 TTEEEEEEEEEEE-HHHHHHHTTS...TTTTSSSSEE---EEEEEEEEESTT-CS--TT-EEEE-SEEE-SS CS
       ADH_N   1 pgevlikvkaagiCgsDlhilkgg...kelevklplilGHEivGeveevgpevkklkvGdrVvvepliscge 69 
                 pg+v+++++a++i+  D+++++     ++  +k+p+i+G +++G+v+++gp+v++lk GdrV  +   s ++
  EPX72788.1  48 PGDVIVDIEAVSINPVDYKLMRTYqlvHKAMQKPPVIPGFDFAGKVVSTGPSVTGLKAGDRVWGKQSLSLQK 119
                 589***************99999888899999******************************9887766544 PP

>> AlaDh_PNT_C  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0     0.043        96     115     127 ..      43      55 ..      41      59 .. 0.88
   2 !   18.8   0.7   3.5e-07   0.00079      29      71 ..     172     214 ..     153     234 .. 0.72

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.043
                  HHTS-TTEEEEET CS
  AlaDh_PNT_C 115 vksMkpgsVivDv 127
                  ++++kpg VivD+
   EPX72788.1  43 IEQLKPGDVIVDI 55 
                  799*********9 PP

  == domain 2  score: 18.8 bits;  conditional E-value: 3.5e-07
                  -EEEEEST.SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTT CS
  AlaDh_PNT_C  29 akvlviGg.GvaGlqAiatakglgakVtvlDvrparleqleslg 71 
                   kv+++G+ G +G+ Ai++ak+lga+Vt +   +  ++  +slg
   EPX72788.1 172 QKVVIVGAsGGVGTFAIQIAKALGAEVTSISSTK-NIQLCKSLG 214
                  489****8799*****************986543.334444444 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   3.6e-07    0.0008       1     125 [.     174     300 ..     174     318 .. 0.85

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 3.6e-07
                 EEEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHCEEEE--TT-HHHHHHHHHHHT-SEEEE--S.---HHHH...HHSHHHHHHHHTHHH CS
   Epimerase   1 ilVtGatGfiGsalvkallekgyevigldrlssasntarledlelveldltdrsalerlfkeeqpdavihlAa.vggvaas...sedpadfieknlqgt 95 
                 ++++Ga+G +G+  ++  ++ g ev+ +++ ++ +  ++l    ++++d++ ++ +++l ++   d v+ l    g ++as   +++   f+ +   ++
  EPX72788.1 174 VVIVGASGGVGTFAIQIAKALGAEVTSISSTKNIQLCKSLG--AFHTIDYKSEDVVAKLAETGPYDFVFDLINdNGLYRASskfMKREGSFFGIASDIS 270
                 689****************************5555555444..9*****************99********8878888887232468889999999999 PP

                 HHHHHHHHHHTCTEEEEEEEGGGGTSCSSS CS
   Epimerase  96 lnlleaarkagvkrllflsSsevYGkdaeq 125
                 l  +  +  ++++  +f +Ss  Y +  eq
  EPX72788.1 271 LSYIGSVMSRKMRPKIFGGSSNAYHDFLEQ 300
                 999999999999999999999999888774 PP

>> ELFV_dehydrog  Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.4   1.4e-06    0.0032      11      65 ..     152     205 ..     146     221 .. 0.84

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 1.4e-06
                    HHHHHHHHHHHHHHTTTS-STTEEEEEE--.SHHHHHHHHHHHHCT-EEEEEEESS CS
  ELFV_dehydrog  11 glGvvyyveemlkklkldslegkrvaisGs.GnvgsyaallltelgakvvavsDss 65 
                    g   v++ e +++++k++   g++v+i G  G vg +a+++++ lga+v+++s  +
     EPX72788.1 152 GTAGVTAWEGLVEHMKIK--PGQKVVIVGAsGGVGTFAIQIAKALGAEVTSISSTK 205
                    556678889999999999..66777777777*********************9765 PP

>> Met_10  Met-10+ like-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.48   1.1e+03     125     141 ..      53      69 ..      21      76 .. 0.69
   2 !    8.4   0.0   0.00076       1.7      97     130 ..     167     201 ..     159     213 .. 0.81
   3 ?    4.6   0.0      0.01        23     133     157 ..     302     326 ..     295     348 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.48
                 SEEEEEES-HHHHHHHH CS
      Met_10 125 krvlaidlnPesvkylk 141
                 + + a+ +nP  +k+++
  EPX72788.1  53 VDIEAVSINPVDYKLMR 69 
                 34567777887777775 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.00076
                 T--TT-EEEETT-..TTTCCHHHCCHHTTSSEEEEE CS
      Met_10  97 lveegevVvdvfA..GiGpfaipiakyskakrvlai 130
                 ++++g+ Vv v A  G+G fai iak + + +v +i
  EPX72788.1 167 KIKPGQKVVIVGAsgGVGTFAIQIAK-ALGAEVTSI 201
                 3789999998877669*********9.666667665 PP

  == domain 3  score: 4.6 bits;  conditional E-value: 0.01
                 -HHHHHHHHHHHHHTT-TTCEEEEE CS
      Met_10 133 nPesvkylkeniklNkvekvvkpil 157
                  Pe++k + + ++ Nkve v+ ++ 
  EPX72788.1 302 TPEAIKNFSNFVAKNKVETVIDSVY 326
                 6********************8764 PP

>> Eno-Rase_NADH_b  NAD(P)H binding domain of trans-2-enoyl-CoA reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.4   0.00016      0.35      33      69 ..     165     201 ..     154     206 .. 0.81
   2 ?   -1.5   0.1      0.99   2.2e+03      52      63 ..     263     274 ..     260     278 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00016
                      S-----.-SEEEEESTSSHHH.HHHHHHHHHSS--EEE CS
  Eno-Rase_NADH_b  33 qkkiekgpkkvLviGaStGYG.LAsriaaafgagadti 69 
                      + ki+   +kv ++GaS G G  A +ia a ga++++i
       EPX72788.1 165 HMKIKP-GQKVVIVGASGGVGtFAIQIAKALGAEVTSI 201
                      455664.589***********77999999999988877 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.99
                      HHHHHHHHHHHS CS
  Eno-Rase_NADH_b  52 YGLAsriaaafg 63 
                      +G+As i++++ 
       EPX72788.1 263 FGIASDISLSYI 274
                      9******99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (352 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       515  (0.0287244); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2647.24
//
Query:       EPX72789.1  [L=345]
Description: peptidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.5e-18   66.3   0.0    7.5e-18   64.8   0.0    1.8  1  ADH_zinc_N       Zinc-binding dehydrogenase
    3.7e-17   63.6   0.0    9.6e-17   62.3   0.0    1.7  2  ADH_zinc_N_2     Zinc-binding dehydrogenase
      9e-10   38.4   0.0    2.2e-09   37.1   0.0    1.8  2  ADH_N            Alcohol dehydrogenase GroES-like domain
    0.00034   20.0   0.5    0.00058   19.2   0.5    1.3  1  AlaDh_PNT_C      Alanine dehydrogenase/PNT, C-terminal domain
     0.0029   17.3   0.3     0.0045   16.7   0.3    1.2  1  ELFV_dehydrog    Glutamate/Leucine/Phenylalanine/Valine dehyd
     0.0065   16.0   0.0     0.0094   15.4   0.0    1.3  1  Epimerase        NAD dependent epimerase/dehydratase family
  ------ inclusion threshold ------
      0.012   15.9   0.1      0.069   13.5   0.0    2.1  2  Erythrovirus_X   Erythrovirus X protein
       0.05   13.4   2.4       0.34   10.7   0.2    2.4  2  Eno-Rase_NADH_b  NAD(P)H binding domain of trans-2-enoyl-CoA 


Domain annotation for each model (and alignments):
>> ADH_zinc_N  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.8   0.0   3.3e-21   7.5e-18       1     101 [.     175     266 ..     175     295 .. 0.82

  Alignments for each domain:
  == domain 1  score: 64.8 bits;  conditional E-value: 3.3e-21
                 HHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTESEEEETTTCHHHHHHHHHTTTSSEEEEEESSCSHHHHHHHHHCEEEEEEEEECSCTSSEEEEEH CS
  ADH_zinc_N   1 gvGlaavqlAkalGaeviavdsseeklelakklGadevinykeadlverikeltggegvdvvfecvGsgatleaalkllkpgGrlvvvGggkgeeefdl 99 
                 gvG++a+q+AkalGaev+ ++s++ +l+l+k+lGa ++i+yk++d+v++++e     ++d+vf+ ++++  ++a+ k++k gG +  ++      +++l
  EPX72789.1 175 GVGTFAIQIAKALGAEVTSISSTQ-NLQLCKSLGAFHTIDYKSEDVVAKLAETG---PYDFVFDLINDNGLYRASSKFMKLGGSFYGIAS-----DISL 264
                 9********************999.5***************5547777777666...***************************999884.....3444 PP

                 HH CS
  ADH_zinc_N 100 rn 101
                 ++
  EPX72789.1 265 SY 266
                 44 PP

>> ADH_zinc_N_2  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0         8   1.8e+04      11      31 ..      36      54 ..      30      70 .. 0.57
   2 !   62.3   0.0   4.3e-20   9.6e-17       1     133 []     206     342 ..     206     342 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 8
                  STTHH.HHH-TT-EEEEEES-H CS
  ADH_zinc_N_2 11 tedfe.aatggegvDvvldtvg 31
                  +edf+ +      vDvv  +++
    EPX72789.1 36 SEDFKpD---DILVDVVAMSIN 54
                  5666432...223777766665 PP

  == domain 2  score: 62.3 bits;  conditional E-value: 4.3e-20
                   TT-SEEEETTSTTHH.HHH-TT-EEEEEES-HHHHH.HHHHHHEEEEEEEEE----........S-EEE-CHHHCTTT-EEEE--GGG...-.-HHH CS
  ADH_zinc_N_2   1 lGAdevidyrtedfe.aatggegvDvvldtvggealleaslkvlpggGrlvsiggpp.......lsaallkpakkrkgrsvkyeflfsmkasaqadi 89 
                   lGA + idy++ed++ + ++ + +D v+d+++ + l++as k+++ gG +  i++++       + ++ l+p+   +g s+ y+ ++ + +  ++  
    EPX72789.1 206 LGAFHTIDYKSEDVVaKLAETGPYDFVFDLINDNGLYRASSKFMKLGGSFYGIASDIslsyigsVMSRKLRPKI-LGGSSHPYQDFM-LASA-PKT- 298
                   8*********9999986666689*********77777*******888******998999**9985555555545.788888888888.5666.777. PP

                   HHHHHHHHHHHH----EEEEEEGGGHHHHHHHHHSS--SSEEEE CS
  ADH_zinc_N_2  90 leelaalieeGklrpvvdrvfpleeaaeAhrylesgrarGKiVl 133
                   ++e  ++  ++ +++v+d+v+++++a +A+++l+s+r +G +V+
    EPX72789.1 299 IKEFSEFAVANGINTVIDSVYDFDRALDAFDRLASHRSKGNVVI 342
                   ******************************************97 PP

>> ADH_N  Alcohol dehydrogenase GroES-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.1   0.0   9.9e-13   2.2e-09       1      66 [.      41     109 ..      41     170 .. 0.88
   2 ?   -2.5   0.0       2.1   4.6e+03      52      62 ..     160     170 ..     153     178 .. 0.75

  Alignments for each domain:
  == domain 1  score: 37.1 bits;  conditional E-value: 9.9e-13
                 TTEEEEEEEEEEE-HHHHHHHTTS...TTTTSSSSEE---EEEEEEEEESTT-CS--TT-EEEE-SEEE CS
       ADH_N   1 pgevlikvkaagiCgsDlhilkgg...kelevklplilGHEivGeveevgpevkklkvGdrVvveplis 66 
                 p+++l++v a +i+  D+++++      +l  k+p+i+G +++G+++++gp+v++lkvGd+V  + +++
  EPX72789.1  41 PDDILVDVVAMSINPVDYKLMQTYkfiGKLGFKYPVIPGLDFAGKIVATGPDVRGLKVGDHVWGKQAVH 109
                 589****************999988888999*******************************9877665 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 2.1
                 S--TT-EEEE- CS
       ADH_N  52 klkvGdrVvve 62 
                 k+k G++Vv+ 
  EPX72789.1 160 KIKPGQKVVIV 170
                 58899999985 PP

>> AlaDh_PNT_C  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.5   2.6e-07   0.00058      29      72 ..     165     208 ..     146     227 .. 0.72

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 2.6e-07
                  -EEEEEST.SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTT CS
  AlaDh_PNT_C  29 akvlviGg.GvaGlqAiatakglgakVtvlDvrparleqleslga 72 
                   kv+++G+ G +G+ Ai++ak+lga+Vt +    + l+  +slga
   EPX72789.1 165 QKVVIVGAsGGVGTFAIQIAKALGAEVTSISST-QNLQLCKSLGA 208
                  489****8799*****************98654.44555555555 PP

>> ELFV_dehydrog  Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.3     2e-06    0.0045      11      64 ..     145     197 ..     137     211 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 2e-06
                    HHHHHHHHHHHHHHTTTS-STTEEEEEE--.SHHHHHHHHHHHHCT-EEEEEEES CS
  ELFV_dehydrog  11 glGvvyyveemlkklkldslegkrvaisGs.GnvgsyaallltelgakvvavsDs 64 
                    g+  +++ e +++++k++   g++v+i G  G vg +a+++++ lga+v+++s  
     EPX72789.1 145 GVAGLTAWEGLVEHMKIK--PGQKVVIVGAsGGVGTFAIQIAKALGAEVTSISST 197
                    444456778999999999..66777777777*********************975 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   4.2e-06    0.0094       1      80 [.     167     245 ..     167     287 .. 0.89

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 4.2e-06
                 EEEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHCEEEE--TT-HHHHHHHHHHHT-SEEEE--S.---HHHH CS
   Epimerase   1 ilVtGatGfiGsalvkallekgyevigldrlssasntarledlelveldltdrsalerlfkeeqpdavihlAa.vggvaas 80 
                 ++++Ga+G +G+  ++  ++ g ev+ +++ ++ +  ++l    ++++d++ ++ +++l ++   d v+ l    g ++as
  EPX72789.1 167 VVIVGASGGVGTFAIQIAKALGAEVTSISSTQNLQLCKSLG--AFHTIDYKSEDVVAKLAETGPYDFVFDLINdNGLYRAS 245
                 689****************************6666655555..9*****************99******996656555555 PP

>> Erythrovirus_X  Erythrovirus X protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   3.1e-05     0.069      23      51 ..      55      83 ..      44      94 .. 0.84
   2 ?   -1.0   0.0         1   2.3e+03      45      59 ..     264     278 ..     242     291 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 3.1e-05
  Erythrovirus_X 23 kmqyylvktytslgklaynypvltmlgla 51
                     ++y l++ty  +gkl ++ypv+  l +a
      EPX72789.1 55 PVDYKLMQTYKFIGKLGFKYPVIPGLDFA 83
                    5789******************9876655 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 1
  Erythrovirus_X  45 ltmlglamsyklgpr 59 
                     l+ +g  ms kl p+
      EPX72789.1 264 LSYIGSVMSRKLRPK 278
                     678899999999996 PP

>> Eno-Rase_NADH_b  NAD(P)H binding domain of trans-2-enoyl-CoA reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.2   0.00015      0.34      33      69 ..     158     194 ..     149     198 .. 0.81
   2 ?    1.9   0.1     0.082   1.8e+02      46      63 ..     251     267 ..     235     272 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00015
                      S-----.-SEEEEESTSSHHH.HHHHHHHHHSS--EEE CS
  Eno-Rase_NADH_b  33 qkkiekgpkkvLviGaStGYG.LAsriaaafgagadti 69 
                      + ki+   +kv ++GaS G G  A +ia a ga++++i
       EPX72789.1 158 HMKIKP-GQKVVIVGASGGVGtFAIQIAKALGAEVTSI 194
                      455664.589***********77999*99999988877 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.082
                      ESTSSHHHHHHHHHHHHS CS
  Eno-Rase_NADH_b  46 iGaStGYGLAsriaaafg 63 
                      +G+S  YG+As i++++ 
       EPX72789.1 251 LGGS-FYGIASDISLSYI 267
                      5666.4********9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (345 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       401  (0.022366); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2666.68
//
Query:       EPX72790.1  [L=343]
Description: uracil DNA N-glycosylase Thp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-16   61.0   0.0      2e-16   60.3   0.0    1.2  1  UDG       Uracil DNA glycosylase superfamily


Domain annotation for each model (and alignments):
>> UDG  Uracil DNA glycosylase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.3   0.0   1.1e-20     2e-16       3     154 ..     157     323 ..     155     325 .. 0.84

  Alignments for each domain:
  == domain 1  score: 60.3 bits;  conditional E-value: 1.1e-20
                 C-CTT-SEEEEESSTCHHHHHHSSSS.-STT--HHHHHHHCCCCCCCHHG..........CTEEEEESSS....SECGCTTCCCCTCCHHHHHHHHHHH CS
         UDG   3 egppdakvvivGeaPgaeedatglpFsgragnllrkllneaglkrdlese..........qgvyitnvvkcrppgnrdtptsaeikacaplleeeiell 91 
                 +  +++  ++vG +Pg ++   g+++ + ++n +++++n+ g+ ++  ++          +g++itn++  rp  + ++++++e++++a +lee+++++
  EPX72790.1 157 HIRENPYAILVGLNPGLTSSLRGHAY-ASPSNSFWRMMNKSGILEKGVEFtyendqdlpaHGLGITNICA-RPSASGADLSKEEFREGAFILEEKVRRY 253
                 566788889*****************.9999**********99996666699999***************.7755459********************* PP

                 HSSE.EEEESHHHHHH..HHHHSCES.CCCSCT.........SEEEEES-SSTTTTTTTTSHHHHHHHHHHHH CS
         UDG  92 kprl.ivllGktaakallgeklgklr.gklleak........irvlplphPsplnrnffksnpelkaeawedL 154
                 +pr+ + + Gk  ++ +++ ++g+ r  k +++          rv++  + s++ +    +++++k+e w+++
  EPX72790.1 254 RPRVgLFISGKGIWEEMYKATTGNKRlPKEFQFGwqddtfggSRVFVAISSSGRAAG---YTSARKQELWNEF 323
                 ****88888*******87665554444333333233667899***************...8888888888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       618  (0.0344693); expected 358.6 (0.02)
Passed bias filter:                      295  (0.0164538); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2622.14
//
Query:       EPX72791.1  [L=652]
Description: hypothetical protein SOCG_00553 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0018   18.4   0.3        2.7    8.3   0.0    4.0  3  PPR_2     PPR repeat family


Domain annotation for each model (and alignments):
>> PPR_2  PPR repeat family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.5   0.2    0.0023        42       6      28 ..     386     408 ..     384     414 .. 0.85
   2 !    8.3   0.0   0.00015       2.7       6      42 ..     561     597 ..     558     605 .. 0.87
   3 ?    1.9   0.0     0.014   2.6e+02       2      44 ..     592     634 ..     591     635 .. 0.94

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.0023
       PPR_2   6 yNtlIsglckkgkveeAfklfne 28 
                 y   ++ ++k++++++A+ +f +
  EPX72791.1 386 YKFCMHSFLKQKEFQKAVMFFTK 408
                 667799**************976 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00015
       PPR_2   6 yNtlIsglckkgkveeAfklfneMkkrglePnsyTys 42 
                 y +l+s++++kg++  A+++++   +++   + +T +
  EPX72791.1 561 YSVLLSYFVTKGDFPHALQVMHILSRNKNGLSIHTWN 597
                 999******************9999988777777766 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.014
       PPR_2   2 dvvtyNtlIsglckkgkveeAfklfneMkkrglePnsyTysil 44 
                 +++t+N  +  l++ + ++  ++   e ++ ++  n+ T  i+
  EPX72791.1 592 SIHTWNWWLLSLVRSKLYDRVVRACCEFQSSKVHSNERTNEIM 634
                 589***********************************99887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (652 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       812  (0.0452898); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.25s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 4653.34
//
Query:       EPX72792.1  [L=224]
Description: ribosomal protein subunit Rsm25 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-59  200.4  11.7    5.2e-56  189.8   5.4    2.0  2  MRP-S25   Mitochondrial ribosomal protein S25
     0.0075   16.5   5.1      0.011   15.9   2.9    2.1  2  MRP-S23   Mitochondrial ribosomal protein S23


Domain annotation for each model (and alignments):
>> MRP-S25  Mitochondrial ribosomal protein S25
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.4   6.3e-07    0.0057       4      50 ..       3      48 ..       1      58 [. 0.77
   2 !  189.8   5.4   5.7e-60   5.2e-56      75     227 ..      50     201 ..      45     204 .. 0.96

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 6.3e-07
     MRP-S25  4 qtnavnvlertsallksgllkkkPawydvvakiPPstkltrkpklre 50
                + +a  +l++++a+ k + +   P wy +vak+PP +++ ++ ++  
  EPX72792.1  3 KHQANSILRKFAAQAK-KPWVGMPSWYSAVAKYPPVSQYLKRITPLY 48
                5689999999999988.566778************999888776653 PP

  == domain 2  score: 189.8 bits;  conditional E-value: 5.7e-60
     MRP-S25  75 eskkekkkkakklfkppklkyleDklRkqFykdHPwElarPkvlvEnsgkdlekkdwsrlrqlgkpldgEsvVqrtlyLlknkeklslseAYdkarfeF 173
                 ++ ++ k+ +k++++p++++++eD+lRk+Fy+dHPwElarP+++ En+g+d+  +dws+  q++k+l+gE+vVqrt++L +  +k+++++AYd+ar+eF
  EPX72792.1  50 SKARKGKNGNKEMHHPQSIHWPEDRLRKKFYQDHPWELARPQIIAENDGNDHLYCDWSQPDQPRKALSGENVVQRTMWLTQY-KKMDVQSAYDEARQEF 147
                 455667888999**********************************************************************.9*************** PP

     MRP-S25 174 yrlrmeeeiesrvAkeEaemyGavfgkseleiglekeqkvidkwkkkaeeetel 227
                 y+lr+++ei++r+A+++a+++Gavf+ks+le g e++q v+++w +ka+++ e+
  EPX72792.1 148 YKLRAKQEIQQRIAHDQAQALGAVFTKSDLELGHELDQAVLNDWFEKASQRSEV 201
                 *************************************************99886 PP

>> MRP-S23  Mitochondrial ribosomal protein S23
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   2.9   1.3e-06     0.011      26     122 ..      21     146 ..       5     150 .. 0.67
   2 ?    2.0   0.3     0.026   2.4e+02      64      90 ..     139     164 ..     118     201 .. 0.57

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 1.3e-06
     MRP-S23  26 eeekPlWydvyeafPPkre......plyerpapkl......edkvreilYeeDevrakfykqygkgseavdllkekkkst.................cq 95 
                 +   P Wy  ++++PP ++      ply+ +a+k        ++ ++i ++eD +r+kfy+++  +    + + e+  +                   +
  EPX72792.1  21 WVGMPSWYSAVAKYPPVSQylkritPLYSSKARKGkngnkeMHHPQSIHWPEDRLRKKFYQDHPWELARPQIIAENDGNDhlycdwsqpdqprkalsGE 119
                 455799**********7652323337888877754678766667799*************866544443333333333335667777777777777666 PP

     MRP-S23  96 rfvekyqelkkkeeldeeelfeeaeka 122
                 + v++ + l + +++d ++++ ea ++
  EPX72792.1 120 NVVQRTMWLTQYKKMDVQSAYDEARQE 146
                 777777777777777777777776666 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.026
     MRP-S23  64 eeDevrakfykqygkgseavdllkekk 90 
                 + De r++fyk  + ++e+ + + +++
  EPX72792.1 139 AYDEARQEFYKL-RAKQEIQQRIAHDQ 164
                 458889999984.44444444443333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       642  (0.0358079); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1611.16
//
Query:       EPX72793.1  [L=351]
Description: RNA export factor Rae1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.8e-21   74.0   7.3     0.0006   20.6   0.0    4.9  5  WD40         WD domain, G-beta repeat
    7.1e-09   35.9   0.0    3.4e-06   27.3   0.0    3.7  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    0.00028   20.3   0.0     0.0006   19.2   0.0    1.5  1  WD40_like    WD40-like domain
     0.0004   19.5   0.6       0.51    9.2   0.0    3.0  3  Ge1_WD40     WD40 region of Ge1, enhancer of mRNA-decapping p
  ------ inclusion threshold ------
      0.022   13.4   0.0      0.045   12.4   0.0    1.5  2  Nup160       Nucleoporin Nup120/160
       0.11   12.4   0.0        5.4    7.0   0.0    2.5  3  BBS2_N       Ciliary BBSome complex subunit 2, N-terminal
       0.11   12.3   0.0       0.37   10.6   0.0    1.9  3  eIF2A        Eukaryotic translation initiation factor eIF2A
        0.6   10.8   4.4       0.94   10.2   2.6    2.2  2  Cadherin_4   Bacterial cadherin-like domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   2.7e-07    0.0006      12      37 ..      32      57 ..      24      58 .. 0.92
   2 !   20.5   0.2   2.9e-07   0.00064       7      38 .]      70     102 ..      63     102 .. 0.88
   3 !   18.2   0.1   1.5e-06    0.0034       6      38 .]     111     146 ..     106     146 .. 0.72
   4 !   15.4   0.2   1.1e-05     0.026       7      38 .]     241     282 ..     235     282 .. 0.72
   5 ?   -2.4   0.0       4.8   1.1e+04      13      27 ..     299     314 ..     289     320 .. 0.70

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 2.7e-07
                SEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40 12 svtslafspdgawlasGsdDgtvriW 37
                s+++lafsp  ++la++s+D +vri+
  EPX72793.1 32 SISDLAFSPQADYLAASSWDSKVRIY 57
                599**********************8 PP

  == domain 2  score: 20.5 bits;  conditional E-value: 2.9e-07
                 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 l  H ++v s+ +s+dg+ lasGs D++ +++d
  EPX72793.1  70 LYDHqGPVLSVHWSRDGTKLASGSTDKSAKVFD 102
                 5569788************************98 PP

  == domain 3  score: 18.2 bits;  conditional E-value: 1.5e-06
                 EEESS.SSEEEEE...EETTSSEEEEEETTSEEEEEE CS
        WD40   6 tltGH.ssvtsla...fspdgawlasGsdDgtvriWd 38 
                 +  +H + +++++   +  + + la+Gs+D+t++ Wd
  EPX72793.1 111 V-AAHdDTIRCVRfveNIGSTPILATGSWDKTLKYWD 146
                 4.58955599**555555555559************9 PP

  == domain 4  score: 15.4 bits;  conditional E-value: 1.1e-05
                 EESS.SS.........EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   7 ltGH.ss.........vtslafspdgawlasGsdDgtvriWd 38 
                 ++ H +          v+s+af+p    +++++ Dgt   Wd
  EPX72793.1 241 FRCHrTQgtgtsdvysVNSIAFHPQYGTFSTAGSDGTFSYWD 282
                 5555422244556788999999999999986544*******9 PP

  == domain 5  score: -2.4 bits;  conditional E-value: 4.8
                 EEEEEEETTSSEEE.E CS
        WD40  13 vtslafspdgawla.s 27 
                 + + af++ g+ +a +
  EPX72793.1 299 IACTAFNRTGDIFAyA 314
                 7788899999887644 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0   0.00053       1.2      38      69 ..      30      61 ..      23      70 .. 0.88
   2 !   27.3   0.0   1.5e-09   3.4e-06       2      91 ..      37     125 ..      36     126 .. 0.87
   3 ?    0.4   0.0      0.36   8.1e+02       9      79 ..     171     244 ..     164     263 .. 0.58
   4 ?    2.4   0.0     0.089     2e+02      37      86 ..     253     301 ..     226     307 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00053
  ANAPC4_WD40 38 dsevrsLaWkpdgklLavaysdgevrlldaes 69
                 + ++++La++p+   La +  d++vr+++++s
   EPX72793.1 30 EDSISDLAFSPQADYLAASSWDSKVRIYEVQS 61
                 6789*************************987 PP

  == domain 2  score: 27.3 bits;  conditional E-value: 1.5e-09
  ANAPC4_WD40   2 swcptmDLiAlatedgellvfRl..ngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWge 91 
                  +++p+ D +A  + d++++++ +   gq v ++   ++++ v s++W+ dg+ La +  d + +++d+++g+   ++ ++++ ++ c+ + e
   EPX72793.1  37 AFSPQADYLAASSWDSKVRIYEVqsTGQSVGKA-LYDHQGPVLSVHWSRDGTKLASGSTDKSAKVFDIQTGQNQ-QVAAHDD-TIRCVRFVE 125
                  79******************9883356999999.78999********************************975.5556666.599999876 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.36
  ANAPC4_WD40   9 LiAlatedgellvfRlng.qrvwtleedkedsevrsLaWkpdgklLavaysdgevrl..ldaesgkvvhslsvk 79 
                  L+ ++t++ ++ v  l+   ++++++ +  + + rs+a   +    a++  +g++ +  ld + +k   s++++
   EPX72793.1 171 LLVIGTAERNVCVVNLSEpTKIFKVAMSPLKFQTRSIACFAKADGYAIGSVEGRCAIqnLDEKIQKENFSFRCH 244
                  77788888888888775447888885555555555555444444444444455444400444444445555555 PP

  == domain 4  score: 2.4 bits;  conditional E-value: 0.089
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtc 86 
                  +  +v+s+a++p+   +  a sdg+ +  d  s + ++s++      ++c
   EPX72793.1 253 DVYSVNSIAFHPQYGTFSTAGSDGTFSYWDKDSHQRLKSYPNVGG-PIAC 301
                  456899*********************999999999988876555.3555 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   2.7e-07    0.0006       3     108 ..      77     185 ..      75     201 .. 0.82

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 2.7e-07
   WD40_like   3 iYsidiskkgslilyGgkddkctvlkleslesvsivesfedSvifvkllddd...lil.vvtlDGtillslleneeevenekieedistvkviddklli 97 
                 + s+  s++g+ ++ G+ d+ ++v+++++++  + v+  +d +  v+++++     il  ++ D t+   +l++   + + ++ e + t++ ++  l+i
  EPX72793.1  77 VLSVHWSRDGTKLASGSTDKSAKVFDIQTGQNQQ-VAAHDDTIRCVRFVENIgstPILaTGSWDKTLKYWDLRQPAPIATVNLPERVYTMDSVHPLLVI 174
                 78999***********************998755.4455666666666666444455526799************************************ PP

   WD40_like  98 GtnkGsiyvfs 108
                 Gt + ++ v +
  EPX72793.1 175 GTAERNVCVVN 185
                 **999888755 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.0   0.00023      0.51     188     229 ..      31      72 ..      13      79 .. 0.83
   2 !    7.6   0.1    0.0007       1.6     189     223 ..      76     110 ..      66     127 .. 0.81
   3 ?   -0.7   0.0      0.24   5.3e+02     189     214 ..     249     281 ..     175     305 .. 0.56

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00023
    Ge1_WD40 188 sliveaafspdGtalatasedGevkffqvyledeeeprCLhe 229
                   i++ afsp    la++s d +v+ + v  ++++  + L++
  EPX72793.1  31 DSISDLAFSPQADYLAASSWDSKVRIYEVQSTGQSVGKALYD 72 
                 369999***********************9999988888865 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0007
    Ge1_WD40 189 liveaafspdGtalatasedGevkffqvyledeee 223
                  + +  +s dGt la  s+d   k f +   ++++
  EPX72793.1  76 PVLSVHWSRDGTKLASGSTDKSAKVFDIQTGQNQQ 110
                 5777889********************98766543 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.24
    Ge1_WD40 189 l.......iveaafspdGtalatasedGevkff 214
                 +       + + af p   + +ta +dG+  ++
  EPX72793.1 249 TgtsdvysVNSIAFHPQYGTFSTAGSDGTFSYW 281
                 133333334555566666666666666665555 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0      0.99   2.2e+03     229     248 ..      41      60 ..      16      66 .. 0.69
   2 ?   12.4   0.0     2e-05     0.045     217     300 ..     112     201 ..      86     235 .. 0.80

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 0.99
                 TTTEEEEEETT-EEEEEETT CS
      Nup160 229 gqtylfalsrdgkLrvWnll 248
                 + +yl+a s d k+r+  ++
  EPX72793.1  41 QADYLAASSWDSKVRIYEVQ 60 
                 66777777777777777665 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 2e-05
                 CEEEEET..........TTTEEEEEETT-EEEEEETTTTEEEEEEE--.-SSSTTS--SSEESEEESSSSEEEE...........E--GG CS
      Nup160 217 lsldvavavvei.....gqtylfalsrdgkLrvWnlltgkclatidllrdeeaqdessskstldpaesslirvs.dggqsylvvtyspss 300
                 ++ d ++++v+         +l++ s d++L+ W+l+   ++at +l+  +++ d++   + +++ae +   v  ++  + + v +sp +
  EPX72793.1 112 AAHDDTIRCVRFvenigSTPILATGSWDKTLKYWDLRQPAPIATVNLPERVYTMDSVHPLLVIGTAERNVCVVNlSEPTKIFKVAMSPLK 201
                 4555566666666667555578889***********************779999999999999999998877767788888888887755 PP

>> BBS2_N  Ciliary BBSome complex subunit 2, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0      0.06   1.4e+02       5      81 ..      38     113 ..      36     117 .. 0.72
   2 ?   -0.9   0.0      0.66   1.5e+03      32      64 ..     105     140 ..      84     144 .. 0.60
   3 ?    7.0   0.0    0.0024       5.4       5      30 ..     165     190 ..     161     213 .. 0.80

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.06
      BBS2_N   5 fdgshpclaaattagkvlihnphekeqklkserlsasesevslLninkevtalaagklkekqekdiLligtqtnlla 81 
                 f ++   laa++  +kv i++ +++ q++ +  l +++  v  ++  ++ t la+g+ +++ +   +  g+++++ a
  EPX72793.1  38 FSPQADYLAASSWDSKVRIYEVQSTGQSVGK-ALYDHQGPVLSVHWSRDGTKLASGSTDKSAKVFDIQTGQNQQVAA 113
                 66777889999999*******9888766555.455557777777788888888888888876655555666666655 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.66
      BBS2_N  32 klkserlsasesevslLninkevta...laagklke 64 
                 + ++++++a++++++ +++ +++ +   la+g++++
  EPX72793.1 105 TGQNQQVAAHDDTIRCVRFVENIGStpiLATGSWDK 140
                 234445556677888887777776544467777765 PP

  == domain 3  score: 7.0 bits;  conditional E-value: 0.0024
      BBS2_N   5 fdgshpclaaattagkvlihnpheke 30 
                  d+ hp l+++t  ++v+++n  e +
  EPX72793.1 165 MDSVHPLLVIGTAERNVCVVNLSEPT 190
                 699*****************975554 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00017      0.37      34      94 ..      49     107 ..      34     158 .. 0.85
   2 ?   -3.2   0.0       2.8   6.4e+03      41      67 ..     171     197 ..     160     201 .. 0.72
   3 ?   -2.5   0.0       1.8     4e+03     104     141 ..     258     292 ..     247     317 .. 0.63

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00017
                 EEEEEEEEEESSSTT--EEECCEESSS.EEEEEE-TTSS-EEEEESSSSCEEEEEECSCEE CS
       eIF2A  34 syygetelyliklkkkksevvelkkegpihdvaWspkskefaviyGkmpakvslfdlkvkv 94 
                 s  ++  +y ++ +++++     +++gp+  v+Ws +++++a   G  ++++++fd +  +
  EPX72793.1  49 SWDSKVRIYEVQSTGQSVGKALYDHQGPVLSVHWSRDGTKLA--SGSTDKSAKVFDIQTGQ 107
                 56678899***********999*****************986..8***********98443 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 2.8
                 EEESSSTT--EEECCEESSS.EEEEEE CS
       eIF2A  41 lyliklkkkksevvelkkegpihdvaW 67 
                 l +i++ + +++vv+l++  +i  va 
  EPX72793.1 171 LLVIGTAERNVCVVNLSEPTKIFKVAM 197
                 445677888888888888888877765 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 1.8
                 -EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEE CS
       eIF2A 104 NtiffspkgklvllaGfgnlaGeleiwdvkkkkkiaka 141
                 N+i f+p+   + +aG     G+ + wd+++ + ++++
  EPX72793.1 258 NSIAFHPQYGTFSTAGS---DGTFSYWDKDSHQRLKSY 292
                 66666666666666653...466777777766666655 PP

>> Cadherin_4  Bacterial cadherin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       1.3     3e+03       8      22 ..     105     119 ..      95     138 .. 0.79
   2 ?   10.2   2.6   0.00042      0.94      45      72 .]     252     280 ..     246     280 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1.3
  Cadherin_4   8 tgvndaPvavddsat 22 
                 tg+n++  a dd++ 
  EPX72793.1 105 TGQNQQVAAHDDTIR 119
                 688888888888875 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00042
  Cadherin_4  45 gddltvtavtvagtyGtltlna.dGsftY 72 
                 +d  +v+++++ ++yGt++  + dG+f+Y
  EPX72793.1 252 SDVYSVNSIAFHPQYGTFSTAGsDGTFSY 280
                 46689*************99888*****9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (351 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       304  (0.0169558); expected 358.6 (0.02)
Passed bias filter:                      265  (0.0147805); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.50u 0.29s 00:00:00.79 Elapsed: 00:00:00.46
# Mc/sec: 2291.62
//
Query:       EPX72794.1  [L=390]
Description: tRNA specific adenosine deaminase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.2e-40  137.9   0.6    1.1e-39  136.9   0.6    1.5  1  A_deamin  Adenosine-deaminase (editase) domain


Domain annotation for each model (and alignments):
>> A_deamin  Adenosine-deaminase (editase) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.9   0.6     6e-44   1.1e-39       2     326 ..      67     379 ..      66     382 .. 0.77

  Alignments for each domain:
  == domain 1  score: 136.9 bits;  conditional E-value: 6e-44
    A_deamin   2 lgTGtkciggskls..kkGdvlnDsHAeviaRRallryLysqlelalskkkessifepkeekgklklkegisfhlyisttPcGdasifskleseeeeek 98 
                 l+TG kc+  sk++  + G++l+D+HAev+a R++ r L+++ +l+ + + +++ + +k+++gk+ l++++++hly+s+ PcGdas+    +s e++  
  EPX72794.1  67 LSTGVKCTPISKIEtnQFGSILHDCHAEVLALRCFNRVLLEHCRLYND-EPSKAWLLEKKDGGKFCLRRNLKLHLYVSECPCGDASMELLANSLENS-- 162
                 89*****98888873366***************************999.777777888888899**********************87777753222.. PP

    A_deamin  99 akeakasdvkrtgalrvkiesgegtipvessegllrtkdgrGer..llsmScsDKlarWnvlGlQGALLshflePiYlssivvgkslysqealerav.. 193
                     +  + k+  +  +++       +  +  g++rtk+gr +     s ScsDKl   + l +  A  s ++ePiY++s+v+ +++  q++++ra+  
  EPX72794.1 163 ----EPWNLKSLADQPMRG-----RADFGQV-GIVRTKPGRADSpfSWSKSCSDKLSSKQFLSILNAQTSLLIEPIYITSLVLPENVVIQTSMKRAFgp 251
                 ....223333333333333.....3333333.4699999988861145678*********************************************855 PP

    A_deamin 194 ykRl.alvsklpkpyrvnkpll.....sllseees.krktakaknlsinWsavdeelevvdattGkrqgttkkklgspqasrlckaelferfkkllssl 285
                  +R+  l+++    y+ +  ++        +++   +  +  ++++ ++W   + + ++v   +G   g+++k ++ +q + ++k++++++f+++    
  EPX72794.1 252 SGRCmGLINQASGDYKFHPFQVlttklRYPFSKMVkPGMRTATSTSVLIWLGDQMNSTQVIH-NGILAGKKAKDTERSQ-TIISKKAMMRTFQNVE--- 345
                 68998667766666666666665543344444333556666666677889999999999998.9********9777766.99***********998... PP

    A_deamin 286 seeklkasltYkeaKeaakeYqeakkqlkkaleeqglgsWi 326
                   + +++ ++Y+++K+a ++ + ak  +++      l+ Wi
  EPX72794.1 346 --QVNSELSNYESWKQANTDREGAKILVRN-----VLKPWI 379
                 ..45556678*****999987777665555.....566665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (390 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       544  (0.0303419); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.29s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 2576.94
//
Query:       EPX72795.1  [L=360]
Description: negative regulator-MBF [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.9e-08   32.4   0.6    1.2e-07   31.2   0.6    1.7  1  Whi5      Whi5 like
  ------ inclusion threshold ------
      0.018   14.5   1.1      0.045   13.3   1.1    1.6  1  DUF5527   Family of unknown function (DUF5527)


Domain annotation for each model (and alignments):
>> Whi5  Whi5 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2   0.6   1.3e-11   1.2e-07       1      25 []     137     161 ..     137     161 .. 0.96

  Alignments for each domain:
  == domain 1  score: 31.2 bits;  conditional E-value: 1.3e-11
        Whi5   1 kLktRLqlAmyKvqtGwedlsLdel 25 
                 +L++RLqlAmyKv  ++  ++L +l
  EPX72795.1 137 NLRLRLQLAMYKVEVNQLYSPLRDL 161
                 7*********************997 PP

>> DUF5527  Family of unknown function (DUF5527)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   1.1     5e-06     0.045      80     124 ..     247     291 ..     235     298 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 5e-06
     DUF5527  80 mPyhpedasePqlrlWkrlGslrrsissfrrsrpvsqsqlalprs 124
                 +P+hp + s     lW r G l rs+s +    p   + ++l++s
  EPX72795.1 247 IPHHPISKSSSSHSLWARHGKLTRSVSLLNDRTPKRIRPRSLSKS 291
                 7*************************9998888877666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       416  (0.0232026); expected 358.6 (0.02)
Passed bias filter:                      239  (0.0133304); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2588.69
//
Query:       EPX72796.1  [L=287]
Description: serpine1 like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.3e-15   56.3  10.3    4.3e-15   56.3  10.3    3.9  3  Stm1_N         Stm1
  ------ inclusion threshold ------
      0.037   14.7   2.4      0.037   14.7   2.4    3.0  3  FXMRP1_C_core  Fragile X-related 1 protein core C terminal
       0.22   11.2   0.3       0.38   10.4   0.3    1.3  1  DUF1666        Protein of unknown function (DUF1666)


Domain annotation for each model (and alignments):
>> Stm1_N  Stm1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.3  10.3   7.2e-19   4.3e-15       1      63 [.       3      74 ..       3      76 .. 0.93
   2 ?    0.5   1.8      0.19   1.1e+03      41      64 ..     100     123 ..      88     124 .. 0.84
   3 ?   -4.0   6.3         3   1.8e+04      31      64 ..     221     254 ..     194     276 .. 0.60

  Alignments for each domain:
  == domain 1  score: 56.3 bits;  conditional E-value: 7.2e-19
      Stm1_N  1 vaskNlFDLLGdD..........deeDpsqaapapppkevdkkstrsaKrptkpepPsqavrearnegarggr 63
                vaskNlFDLLG++          ++++++ ++++p+p+e++++  +s+Kr+ ++++P++++++++++++r+ r
  EPX72796.1  3 VASKNLFDLLGEEtpaanadkkpSNREKK-ESSSPMPRELVAQNNSSKKRDPNQPTPRERTVAKKADQPRRPR 74
                8**************98887777777777.****************************************999 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.19
      Stm1_N  41 ptkpepPsqavrearnegarggrG 64 
                 ++ ++p +++ r+ r++ +r+++G
  EPX72796.1 100 DSAGAPTARRPRRGRENDRRSQTG 123
                 788999999999999999988876 PP

  == domain 3  score: -4.0 bits;  conditional E-value: 3
      Stm1_N  31 dkkstrsaKr..ptkpepPsqavrearnegarggrG 64 
                  +k  +++K   + ++   ++++r     +arggrG
  EPX72796.1 221 TAKESKPKKVvlDIEQTFTTRPARGG--GNARGGRG 254
                 22333333333344444444444433..34455555 PP

>> FXMRP1_C_core  Fragile X-related 1 protein core C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   5.4       1.1   6.6e+03      86     122 ..      44      75 ..      13      91 .. 0.42
   2 ?   -8.0  12.2         3   1.8e+04      49      89 ..      69     111 ..      44     189 .. 0.53
   3 ?   14.7   2.4   6.1e-06     0.037      35      86 ..     219     272 ..     209     285 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1.1
  FXMRP1_C_core  86 asnaseteseakdelsdwslageeeegekesevrsrr 122
                    ++n+s++ ++++ ++++++ a++       + +r+rr
     EPX72796.1  44 QNNSSKKRDPNQPTPRERTVAKKA-----DQPRRPRR 75 
                    222222222222222222222222.....22333444 PP

  == domain 2  score: -8.0 bits;  conditional E-value: 3
  FXMRP1_C_core  49 sgessssslggsrsysgRGrGrRGagatsg..kygtnseasna 89 
                    + +  +++ +g+  + + Gr  R ++ ++   + g+   ++ +
     EPX72796.1  69 QPRRPRRQPQGNEAFIREGREARSNNLSHPvdSAGAPTARRPR 111
                    3333444444455555555555554444332211211111111 PP

  == domain 3  score: 14.7 bits;  conditional E-value: 6.1e-06
  FXMRP1_C_core  35 nr...sdkekgystDeesgessssslggsrsysgRGrGrRGagatsgkygtnsea 86 
                    n+   + k k+ + D+e+  +++  +gg+  ++gRG +rRG++++ + ++t+ +a
     EPX72796.1 219 NNtakESKPKKVVLDIEQTFTTRPARGGGNARGGRGGSRRGNNSAPR-NQTSAQA 272
                    22344677889******************************999866.3443333 PP

>> DUF1666  Protein of unknown function (DUF1666)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.3   6.4e-05      0.38     116     177 ..     166     229 ..     138     241 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 6.4e-05
     DUF1666 116 eesirtfweFlkaDkkkssqilka..llkrkvevedpedlellaelkkslqkkekklkdllrkk 177
                 ees++t+ eFl + k++   + ++  ++ + + +e+ e  +l+a++kk+ +kk++  k+ + kk
  EPX72796.1 166 EESVKTLDEFLASRKSTAKPVGRKveSIDNAKPLEKGEPEDLFASVKKNTSKKNNTAKESKPKK 229
                 89*********999888776644401445555799999********************987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (287 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       823  (0.0459033); expected 358.6 (0.02)
Passed bias filter:                      307  (0.0171231); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.28s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 2003.40
//
Query:       EPX72797.1  [L=341]
Description: Cdc48-Ufd1-Npl4 complex component Ufd1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.2e-67  225.0   0.0    5.8e-67  224.5   0.0    1.2  1  UFD1      Ubiquitin fusion degradation protein UFD1
  ------ inclusion threshold ------
       0.15   12.5   0.1        0.3   11.5   0.1    1.6  1  Spa1_C    Lantibiotic immunity protein Spa1 C-terminal domain


Domain annotation for each model (and alignments):
>> UFD1  Ubiquitin fusion degradation protein UFD1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  224.5   0.0   6.4e-71   5.8e-67       1     173 []      16     201 ..      16     201 .. 0.98

  Alignments for each domain:
  == domain 1  score: 224.5 bits;  conditional E-value: 6.4e-71
        UFD1   1 feekyrcysvsm..kaereelekggk........iiLPpsaLdeLtrlnieyPmlFelsnkkkkksthagVleFtaeegtvylPewmmenlgleegdlv 89 
                 f+ +yrcy++sm  +++  ++++ggk        +iLPpsaL++L+rln++yPmlFe +n++++k+th gVleF+aeeg+vy+P+wmm++l+le gd+v
  EPX72797.1  16 FDAHYRCYPASMmpGEKGVNVNYGGKemhvanclVILPPSALEKLSRLNVSYPMLFEFENAAAEKRTHGGVLEFIAEEGRVYFPYWMMSTLDLEPGDIV 114
                 789*********9988999******************************************************************************** PP

        UFD1  90 eiesvslpkgkfvklqpqsedfldisdpkavLekaLrnfatLtkgdvieikyndkvyelkvlevkpes...avsiietdlevdfaeP 173
                 ++ ++++++g+fvklqpqs++fldisd++avLe+aLrnf+tLt++d++ei yn +++++kv++v+p++    vs+ietdl vdf++P
  EPX72797.1 115 HVINTDISQGSFVKLQPQSVNFLDISDHRAVLESALRNFSTLTRNDIFEILYNGEIFRIKVIDVQPDDsrgVVSVIETDLVVDFETP 201
                 ******************************************************************998999*************98 PP

>> Spa1_C  Lantibiotic immunity protein Spa1 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   3.3e-05       0.3       3      44 ..     158     200 ..     156     241 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 3.3e-05
      Spa1_C   3 kedvteitykgkvYeiledtVseeelgeylgviaelivvd.et 44 
                  +d+ ei+y+g++++i+   V++++   +++vi++  vvd et
  EPX72797.1 158 RNDIFEILYNGEIFRIKVIDVQPDDSRGVVSVIETDLVVDfET 200
                 67899***********************************554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (341 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       341  (0.0190195); expected 358.6 (0.02)
Passed bias filter:                      304  (0.0169558); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 2639.31
//
Query:       EPX72798.1  [L=495]
Description: RNA-binding protein Cip1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.7e-09   35.9   0.0    9.1e-09   35.0   0.0    1.5  1  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
  ------ inclusion threshold ------
      0.025   13.7   0.1      0.042   13.0   0.1    1.3  1  PAXNEB    PAXNEB protein
       0.11   12.7   6.7       0.19   12.0   6.7    1.3  1  DUF3886   Protein of unknown function (DUF3886)


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.0   0.0   1.5e-12   9.1e-09       1      70 []     213     283 ..     213     283 .. 0.95

  Alignments for each domain:
  == domain 1  score: 35.0 bits;  conditional E-value: 1.5e-12
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrelk 70 
                 ++V+n+p+++ +++L e F++ G  +     +   +g  +g af +F  +e+A++ ++alng+++++r+l+
  EPX72798.1 213 IVVKNIPFSLEKDTLLEAFKQLGIPRPYAFNYHyDNGIFRGLAFANFYLPEEAQAVVQALNGYEINSRRLR 283
                 79*********************998888888889*********************************986 PP

>> PAXNEB  PAXNEB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   7.1e-06     0.042      61     187 ..     266     416 ..     262     450 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 7.1e-06
      PAXNEB  61 eGvvqkhevlvlsldddpeewlreLPgpltdkeeekeqrkeekkaeeekeendlkIAWRYek............................elpkvqseq 131
                 + vvq  + + +  ++ + ew r+LP+   +k e++++r+ e++++ +++++++ + ++ +                               ++  s++
  EPX72798.1 266 QAVVQALNGYEINSRRLRVEWKRQLPAAEREKAEKAKKRQAEERRR-KHQYKTFEVSFKDQGldlnntttleiysrlllfanhclpgnelVFEAP-SKD 362
                 5555555555555566789*********987666666666555555.44689999999998899999999999999**********998633333.334 PP

      PAXNEB 132 asastesekfghqFdltkrleseslseisftplddskkseeeekeslkespryssl 187
                 ++ s++ ++f  +Fdl   ++++  + i+ t+++ +kk++  +++++ +sp +++ 
  EPX72798.1 363 HTISNAVRAFALHFDLDYYVQPSAET-IKLTVTQPAKKPSAVSHSQP-SSPGFRRA 416
                 44456899**********99998877.66666665566665544443.35545544 PP

>> DUF3886  Protein of unknown function (DUF3886)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   6.7   3.2e-05      0.19      24      61 ..     287     324 ..     281     329 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 3.2e-05
     DUF3886  24 kkeLkeeeekrkeeekarreeerkareknksfeelLee 61 
                 k++L + e ++ e+ k+r+ eer+++ + k+fe   ++
  EPX72798.1 287 KRQLPAAEREKAEKAKKRQAEERRRKHQYKTFEVSFKD 324
                 899*****************************976555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (495 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1076  (0.0600145); expected 358.6 (0.02)
Passed bias filter:                      600  (0.0334653); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.23s 00:00:00.83 Elapsed: 00:00:00.39
# Mc/sec: 3789.84
//
Query:       EPX72799.1  [L=565]
Description: inner membrane transport protein yieO [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.7e-41  140.6  51.2    4.1e-40  137.8  50.2    2.8  2  MFS_1     Major Facilitator Superfamily
      4e-15   55.6   4.3      4e-15   55.6   4.3    2.7  3  Sugar_tr  Sugar (and other) transporter
    2.5e-11   42.7  14.1    4.9e-11   41.8  14.1    1.4  1  TRI12     Fungal trichothecene efflux pump (TRI12)


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.8  50.2   6.9e-44   4.1e-40      11     352 ..      85     474 ..      82     475 .. 0.84
   2 ?    0.3   0.0     0.045   2.7e+02     151     173 ..     523     543 ..     516     562 .. 0.50

  Alignments for each domain:
  == domain 1  score: 137.8 bits;  conditional E-value: 6.9e-44
       MFS_1  11 arsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalg.lllllfasslwlllvlrvlqGlgagalfpagaa 108
                 + +i+++alp +++e+++ ++s   ++ t y+l++ +  + +G+ls+ +Gr+++l +++++f lg +l ++ ++++ +l+v+r++qGlg+g++++++++
  EPX72799.1  85 NNTIVTVALP-TISEHFH-DASRSFWIGTSYSLATNAILPAVGVLSNIIGRKPMLYASVFFFMLGsALSGA-SQNMIMLIVCRAIQGLGGGGITSLVNI 180
                 678999****.*******.999999****************************************444444.46666********************** PP

       MFS_1 109 liadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpeepperkrkspkeee................... 188
                 +i+d++p + r+ ++gl++++++++ +lgp+lgg++++   Wr++f+i+ +v+ +a+   +l+l++ p++ +++++  +                    
  EPX72799.1 181 IISDITPLKTRPIYTGLVASAWGMALVLGPILGGVICQRTTWRWIFFINLPVGGIAISSLILFLRVLPVQGQTFRKFSKTfdffglitiitgvvlfllg 279
                 ********************************************************8866799999999999999999999****************** PP

       MFS_1 189 .................................kgtgpaplvpawkallkdpvlw.....illialllfffgfsglltllplylqevlglsglllagll 249
                                                    t          a+l + +++     +ll+++++ f+ ++++++++p y+q  +g +  ++ag+ 
  EPX72799.1 280 islgassgrwsrpgvlpyivigavlvatafiydFNT-------KRNAVLPSTFFLninslSLLVCSFVHFLNYYLFSYYIPQYFQRIRGDD-PIMAGVH 370
                 *****9988855555555544443333333333222.......2222222223324555589999999999********************.8****** PP

       MFS_1 250 lallalvgailallagrlsdrlgrrrrlllallllllaalg.lallavtssavllllvlvliGfglgfvfpsllalasdlappeeagtasglfntagsl 347
                 +  +++v ++l + +g ++++lgr ++ll +++++ +a +g l+ l++++s + ++ +  ++ fg+gf f + + +++  +pp+ + +a++  +++++ 
  EPX72799.1 371 FLPGGCVLCCLTISVGIVLKKLGRYKPLLYIGAIACTAGMGsLISLGAYTSFSKSMGLTTIYMFGSGFLFLPPMIAMQAAFPPSLMSMATATLMFIRNM 469
                 ************************6665555555555555505555555555555556666666*********************************** PP

       MFS_1 348 ggalg 352
                 gga+g
  EPX72799.1 470 GGAIG 474
                 ***98 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.045
       MFS_1 151 ravfyilaivsllafvlfllllp 173
                 r ++++++i+++++ +   ++++
  EPX72799.1 523 RTIWIFATIAMAIGTLA--VFFV 543
                 33333333444443332..2222 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.6   4.3   6.6e-19     4e-15      64     190 ..     122     243 ..      50     248 .. 0.84
   2 ?    0.1  10.2     0.047   2.8e+02     258     400 ..     334     472 ..     314     492 .. 0.69
   3 ?   -3.4   0.1      0.54   3.2e+03     416     437 ..     522     543 ..     508     548 .. 0.56

  Alignments for each domain:
  == domain 1  score: 55.6 bits;  conditional E-value: 6.6e-19
                 HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Sugar_tr  64 lfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglgln 162
                   +g l++++GRk+ l +++++f+ g++l++a++   ++ +liv+R + G+g G+++ lv + is i+p k R + ++l  +a+ +  +++ i+g ++ 
  EPX72799.1 122 PAVGVLSNIIGRKPMLYASVFFFMLGSALSGASQ---NMIMLIVCRAIQGLGGGGITSLVNIIISDITPLKTRPIYTGLVASAWGMALVLGPILGGVIC 217
                 5689******************************...9******************************************************9998875 PP

                 TSS-TTHHHHHHHCCHHHHHHHH.HHGGG CS
    Sugar_tr 163 ktsnadgwrillglqlvpallll.illlf 190
                 + +    wr+ ++++l    + +  l+lf
  EPX72799.1 218 QRTT---WRWIFFINLPVGGIAIsSLILF 243
                 5555...9999999998765544044455 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.047
                 HHHHHHHHHHTTHHHHHHHTTTHHHHSS-THHHHHHHHH...HHHHHHHHHHHHHHHHHS-S.HHHHHHHHHHHHHHHHHHH..HHHHTTSS...CHHH CS
    Sugar_tr 258 gvvlqifqqltGinaimyysptifenlglsksllvtiiv...gvvnfvatfvaiflvdrfGR.RtllllGaagmaicfvilgivalllvakskaasiva 352
                  +v+ ++ +l++   + yy p+ f+ +  ++++++ + +   g+v    t+ +  + +++GR ++ll +Ga+ +++ +  l     ++++ s  +s+++
  EPX72799.1 334 LLVCSFVHFLNY-YLFSYYIPQYFQRIRGDDPIMAGVHFlpgGCVLCCLTISVGIVLKKLGRyKPLLYIGAIACTAGMGSLI-SLGAYTSFS--KSMGL 428
                 455555555555.7899999999****999995555444333677777777777999*****88999999999999999994.555555554..34444 PP

                 HHHHHHHHHHHHTTTTHHHHHHHHHHSHTTTHHHHHHHHHHHHHHHHH CS
    Sugar_tr 353 ivfialfialfalgwgpvpwvlvsElfpqsvRskalaiavavnwlanf 400
                  + i++f   f + +   p + ++  fp+s+ s a+a  +++ ++   
  EPX72799.1 429 -TTIYMFGSGFLFLP---PMIAMQAAFPPSLMSMATATLMFIRNMGGA 472
                 .44555556666333...234567788888888777776666665555 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 0.54
                 -HHHHHHHHHHHHHHHHHHHHS CS
    Sugar_tr 416 gyvflvfaglavlfiifvfffv 437
                 + + ++fa +a++  +  +ffv
  EPX72799.1 522 FRTIWIFATIAMAIGTLAVFFV 543
                 3344444444444444444443 PP

>> TRI12  Fungal trichothecene efflux pump (TRI12)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.8  14.1   8.3e-15   4.9e-11      65     329 ..      91     347 ..      86     363 .. 0.80

  Alignments for each domain:
  == domain 1  score: 41.8 bits;  conditional E-value: 8.3e-15
       TRI12  65 salpnilqdvgqsensslfstlwttgqavsilvmgrltdrfgrrpfvilthilglvgaivgctatkfntllaamtllgvaagpaga.splfvgelmsnk 162
                  alp i +   ++  s  + t +++     +  +g l++ +gr+p++ ++  + ++g+ +  +++++  l+ + ++ g+  g   +   +++ ++   k
  EPX72799.1  91 VALPTISEHFHDASRSFWIGTSYSLATNAILPAVGVLSNIIGRKPMLYASVFFFMLGSALSGASQNMIMLIVCRAIQGLGGGGITSlVNIIISDITPLK 189
                 5888888888888888888999999888888899****************999999999999999999999*******99887766267899****99* PP

       TRI12 163 tkfl.gllivsipvvvtsglspylgqrlaiqgswrwifyiyiitsaiavllivvwyyppsfaqlhgkkvrkreelakldwigiilvivgvslfllgvsw 260
                 t+ +   l+ s+  +++  l+p lg  ++ + +wrwif+i + +  ia+  ++++        ++g+  rk       d+ g+i +i+gv lfllg+s 
  EPX72799.1 190 TRPIyTGLVASAWGMALV-LGPILGGVICQRTTWRWIFFINLPVGGIAISSLILFLRVLP---VQGQTFRKFS--KTFDFFGLITIITGVVLFLLGISL 282
                 985414567788888888.9*****************************98888775433...4455555443..368********************9 PP

       TRI12 261 ggkpnspwnsakviglissglgslvvfalyevygkpvrpivppalfkdtrgfvcillissimgamnlsl 329
                 g      w    v+  i  g+  lv  a+   +    + ++p ++f +   +   ll+ s +  +n  l
  EPX72799.1 283 GAS-SGRWSRPGVLPYIVIGAV-LVATAFIYDFNTKRNAVLPSTFFLNINSLS--LLVCSFVHFLNYYL 347
                 876.578***********9986.555555555666678899999998877653..45555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (565 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       717  (0.0399911); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.26s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 3987.74
//
Query:       EPX72800.1  [L=80]
Description: inner membrane protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-22   79.7   7.1    1.8e-22   79.4   7.1    1.0  1  Pet191_N  Cytochrome c oxidase assembly protein PET191
  ------ inclusion threshold ------
      0.068   13.2   3.7        1.8    8.7   0.4    2.4  2  Cmc1      Cytochrome c oxidase biogenesis protein Cmc1 like
       0.72   10.1   5.0       0.16   12.2   1.3    1.9  2  CHCH      CHCH domain


Domain annotation for each model (and alignments):
>> Pet191_N  Cytochrome c oxidase assembly protein PET191
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.4   7.1     3e-26   1.8e-22       2      65 ..       3      65 ..       2      66 .. 0.98

  Alignments for each domain:
  == domain 1  score: 79.4 bits;  conditional E-value: 3e-26
    Pet191_N  2 ksCkdlrealaeClqksdCvkkerktpkeClkekaeelpeeCkqlrkayfeCkrgllDmrkRfr 65
                +sC+++r++la+Cl++sdC+ +++k+++eC+++k e+lp eC++l+ ++ eCkr++lDm+kR+r
  EPX72800.1  3 RSCNSIRKDLADCLLHSDCMFIHGKSARECMRNK-EQLPVECRNLMTSFGECKRQMLDMTKRYR 65
                79********************************.9**************************98 PP

>> Cmc1  Cytochrome c oxidase biogenesis protein Cmc1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   1.0     0.004        24      34      48 ..       4      18 ..       1      38 [. 0.79
   2 ?    8.7   0.4   0.00029       1.8       7      26 ..      37      56 ..      29      63 .. 0.71

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.004
        Cmc1 34 kCneekeamkkClke 48
                 Cn +++++ +Cl +
  EPX72800.1  4 SCNSIRKDLADCLLH 18
                477777777777765 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00029
        Cmc1  7 kkarkeCaelikalaeChkd 26
                ++   eC++l++ + eC ++
  EPX72800.1 37 EQLPVECRNLMTSFGECKRQ 56
                44448899999999999773 PP

>> CHCH  CHCH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1      0.59   3.5e+03       8      13 ..      12      17 ..      10      22 .. 0.60
   2 ?   12.2   1.3   2.6e-05      0.16      10      34 ..      31      55 ..      27      56 .. 0.92

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.59
                HHHHHH CS
        CHCH  8 ylkClk 13
                + +Cl 
  EPX72800.1 12 LADCLL 17
                667764 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 2.6e-05
                HHHHHCTSSTTTTHHHHHHHHHHHC CS
        CHCH 10 kClkdnsdefskCrkefeafkeCvk 34
                +C++++++   +Cr++++ f eC++
  EPX72800.1 31 ECMRNKEQLPVECRNLMTSFGECKR 55
                7******99**************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       602  (0.0335769); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.36u 0.26s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 607.00
//
Query:       EPX72801.1  [L=456]
Description: tubulin alpha 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.6e-66  224.3   0.0    2.3e-66  223.7   0.0    1.3  1  Tubulin        Tubulin/FtsZ family, GTPase domain
    6.6e-51  171.7   0.0    1.1e-50  171.0   0.0    1.4  1  Tubulin_C      Tubulin C-terminal domain
  ------ inclusion threshold ------
      0.017   14.8   0.0      0.052   13.2   0.0    1.8  1  Tubulin_3      Tubulin domain
        1.2    9.2   3.1       0.96    9.6   0.6    2.0  2  Spectrin_like  Spectrin like domain


Domain annotation for each model (and alignments):
>> Tubulin  Tubulin/FtsZ family, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  223.7   0.0   5.2e-70   2.3e-66       1     196 [.       3     218 ..       3     219 .. 0.99

  Alignments for each domain:
  == domain 1  score: 223.7 bits;  conditional E-value: 5.2e-70
                 EEEEEEEHHHHHHHHHHHHH...HHHCH.....................HHHT.....TTEEEEE....EEESBHHHHHTS-GS........EEEE--C CS
     Tubulin   1 eiivigvGqcGnqignelwellakehgiqsdg.................dslesfFsesgkveyiprsvaidtdpqvlneikags..elfnpnklllgk 80 
                 e+i ++vGq+G+qign++wel++ ehgi +dg                 d + +fFse+g+++y+prs+ +d++p+v++++++g+  +lf+p+++++gk
  EPX72801.1   3 EVISVHVGQAGVQIGNACWELYCLEHGIGPDGypldktnqtpygtsyrdDGFATFFSETGQGKYVPRSIYVDLEPNVIDQVRTGTyrDLFHPEQMVSGK 101
                 799*************************9999******************************************************************* PP

                 CCCTTC--TT-HHHHHHHHHHTHHHHHHHHTT-SE.SEEEEEEETTSSHHHHHHHHHHHHHHHTSTTSEEEEEEEE--.GG.G-HHHHHHHHHHHHHHH CS
     Tubulin  81 egagnngaggypevgkeaaeeileeirkevekcdslqgffitaslgGGTGSGlgpvilevlkeeypkalvvtvvvlPs.efsevvvepynailalkeli 178
                 e+a+nn+a+g+++vgke++e+ le+ir+++++c  lqgf++++s+gGGTGSGlg+++le+l+ e++k+  + ++v+P  + s++vvepyn++l++++  
  EPX72801.1 102 EDASNNYARGHYTVGKEMIEDTLERIRRMADNCSGLQGFLVFHSFGGGTGSGLGALLLERLNMEFAKKSNLQFSVYPApQVSTSVVEPYNSVLTTHATL 200
                 *************************************************************************************************** PP

                 HT-SEEEEEEHHHHHCCS CS
     Tubulin 179 eesdavividNdaLlkil 196
                 ++sd+++++dN+a ++i+
  EPX72801.1 201 DNSDCTFMVDNEACYDIC 218
                 *****************9 PP

>> Tubulin_C  Tubulin C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  171.0   0.0   2.5e-54   1.1e-50       1     125 [.     268     397 ..     268     398 .. 0.99

  Alignments for each domain:
  == domain 1  score: 171.0 bits;  conditional E-value: 2.5e-54
                 TTC-EEEEEEESSSCTTTTTCS-HHHHHHHHHTCSGGGBSSSTSTTTSSEEEEEEEEEESSSHHHHHHHHHHHHHTTTS-BSTTSTTTEEEEEEECECT CS
   Tubulin_C   1 PrlhFlltsyaPlvsaekaavektsvqdvtrallepknimvkvdprkgkylaiallirGdvepkevnkavqrikekkkaqfveWiptgikvalnkkspy 99 
                 Pr+hF+l++y+P+vs++ka++e +svq++t++++ep n+mvk+dpr+g+y+a++ll+rGdv p++v++av++ik+k+++qfv+W+ptg+k+++++++p+
  EPX72801.1 268 PRIHFPLVTYSPIVSKSKAFHEANSVQEITNQCFEPYNQMVKCDPRSGRYMATCLLYRGDVIPRDVQAAVTTIKAKRTIQFVDWCPTGFKIGICSQPPQ 366
                 9************************************************************************************************** PP

                 -TTTS.....SCEEEEEEEEGGGHHHHHHHH CS
   Tubulin_C 100 vkkqs.....kvsvlmlaNttsiaelfkrll 125
                   ++s     +++v+ml+Nttsiae+++rl+
  EPX72801.1 367 HIPDSgiakvDRAVCMLSNTTSIAEAWSRLD 397
                 *****************************97 PP

>> Tubulin_3  Tubulin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.2e-05     0.052      57     108 ..     121     172 ..      86     209 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.2e-05
   Tubulin_3  57 hdlldrdlrpfaeecdqlrglqvftgvddaWG.Gfaakylerlrdeygkksil 108
                 +d l+r +r +a++c  l+g+ vf +     G G +a  lerl  e++kks l
  EPX72801.1 121 EDTLER-IRRMADNCSGLQGFLVFHSFGGGTGsGLGALLLERLNMEFAKKSNL 172
                 366777.899****************99887769***************9954 PP

>> Spectrin_like  Spectrin like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1      0.41   1.8e+03      50      77 ..     284     309 ..     281     310 .. 0.76
   2 ?    9.6   0.6   0.00021      0.96      27      58 ..     424     455 ..     416     456 .] 0.91

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.41
  Spectrin_like  50 SelFteedrkqlerevekaqehyeeLlk 77 
                    S+ F+e+  +++++  +++ e y++++k
     EPX72801.1 284 SKAFHEA--NSVQEITNQCFEPYNQMVK 309
                    6666654..5678899999999999986 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00021
  Spectrin_like  27 eeyrqvlknLelhyqdFlrdSqeSelFteedr 58 
                    +e r+ l  Le  yq+  +dS + e++++ed+
     EPX72801.1 424 SEAREDLAALERDYQEVGQDSIDNEMYEAEDE 455
                    689999************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (456 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       449  (0.0250432); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 3461.70
//
Query:       EPX72802.1  [L=616]
Description: transcription factor Hsf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.4e-31  108.9   0.4    2.8e-31  108.0   0.4    1.5  1  HSF_DNA-bind  HSF-type DNA-binding
  ------ inclusion threshold ------
      0.079   13.0   0.2        1.4    9.0   0.2    2.6  2  REV           REV protein (anti-repression trans-activator pr
       0.12   12.6   0.1       0.39   10.9   0.1    1.9  1  PI_PP_I       Phosphoinositide phosphatase insertion domain
       0.12   13.0   0.6       0.34   11.6   0.6    1.7  1  YabA          Initiation control protein YabA


Domain annotation for each model (and alignments):
>> HSF_DNA-bind  HSF-type DNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.0   0.4   6.2e-35   2.8e-31       1      96 []      57     158 ..      57     158 .. 0.94

  Alignments for each domain:
  == domain 1  score: 108.0 bits;  conditional E-value: 6.2e-35
                   HHHHHHHHHCT...TTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSB...TTB--TTSEEEEESS--XXXXXXXX CS
  HSF_DNA-bind   1 FlkkLyklled...eelisWsedgksfvvkdkeefakevlpkyfkhsnfssFvrqLnlYgFrkvkrkee...kkkkkskvweFshenFkrgkpelLk 91 
                   F +kLy++++d   ++li+Wse+g+sf v  +e+fak vlp+yfkh+nfssFvrqLn+YgF+kv + ++   ++++ ++  eF+++nF+r++pelL+
    EPX72802.1  57 FSNKLYNMVNDsstDSLIRWSERGDSFFVIGHEDFAKLVLPRYFKHNNFSSFVRQLNMYGFHKVPHIQQgvlQSDSPNELLEFANPNFQRDQPELLC 153
                   889******98888899**********************************************999999997666776888**************** PP

                   XXXXX CS
  HSF_DNA-bind  92 kikrk 96 
                    ++rk
    EPX72802.1 154 YVTRK 158
                   **997 PP

>> REV  REV protein (anti-repression trans-activator protein)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.12   5.6e+02      47      71 ..      49      73 ..      31      77 .. 0.89
   2 ?    9.0   0.2   0.00031       1.4      40      86 ..     211     256 ..     202     264 .. 0.88

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.12
         REV 47 erqlrlvalaekllavyldrstdeP 71
                 + +++  +++kl  +  d std+ 
  EPX72802.1 49 SQTRKITQFSNKLYNMVNDSSTDSL 73
                58899**********9999999985 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00031
         REV  40 nrrrrrrerqlrlvalaekllavyldrstdePldlalqhlerltlde 86 
                 + r r+r++q  +  +   l +vyld   ++P  + +++ +rl l+ 
  EPX72802.1 211 ETRERQRRHQETIDKILRFLASVYLDGK-QKPASKVMPKSRRLLLEA 256
                 56889999999***************99.9*************9986 PP

>> PI_PP_I  Phosphoinositide phosphatase insertion domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   8.7e-05      0.39      30      76 ..     171     215 ..     151     232 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 8.7e-05
                 HHHHHHHHHHHHHHHHH-SSHHHHHHHHHCT-SS--HHHHTS-HHHH CS
     PI_PP_I  30 kqdlnqfllkWeeikktslsLeedLnkiannktplPsWfnelskaqq 76 
                   d+ +++++ ++i+++++sL+++Ln+i+ ++     W ++++++++
  EPX72802.1 171 SLDMSTITMELQNIRSQQMSLSSELNRIQVDN--AALWQENIETRER 215
                 5688899999*******************998..5568888777665 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.6   7.7e-05      0.34      17      80 ..     174     237 ..     167     238 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 7.7e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        YabA  17 leelleeleelkeelaelleenaeLeleneklrerleeeekkekekkkelsegkenLarlYeeG 80 
                 +++++ el++++++  +l  e ++++++n  l ++  e++++++++++++++  + La +Y +G
  EPX72802.1 174 MSTITMELQNIRSQQMSLSSELNRIQVDNAALWQENIETRERQRRHQETIDKILRFLASVYLDG 237
                 67788999999999999999999*******9999988899999999999999999999999888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (616 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       813  (0.0453455); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.25s 00:00:00.85 Elapsed: 00:00:00.39
# Mc/sec: 4701.53
//
Query:       EPX72803.1  [L=662]
Description: Set3 complex subunit Snt1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      2e-08   34.3   1.3    8.6e-08   32.3   0.0    2.6  3  Myb_DNA-binding  Myb-like DNA-binding domain


Domain annotation for each model (and alignments):
>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1       0.6   1.1e+04      22      41 ..     130     137 ..     122     139 .. 0.51
   2 !   32.3   0.0   4.8e-12   8.6e-08       4      43 ..     251     290 ..     249     293 .. 0.97
   3 ?   -0.7   0.0     0.097   1.7e+03       4      17 ..     518     531 ..     517     535 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 0.6
                      CHHHHHHHHTSS-HHHHHHH CS
  Myb_DNA-binding  22 rWkkIaerlggRtekqcrsr 41 
                       W+            q  +r
       EPX72803.1 130 TWN------------QLANR 137
                      444............44444 PP

  == domain 2  score: 32.3 bits;  conditional E-value: 4.8e-12
                      SBHHHHHHHHHHHHHHTTCHHHHHHHHTSS-HHHHHHHHH CS
  Myb_DNA-binding   4 WteeEdelLleavkkhGnrWkkIaerlggRtekqcrsrwr 43 
                      Wtee + ++++ + +hG+r+ kIae ++g++ k+c ++++
       EPX72803.1 251 WTEEQHSIFVQQLLLHGKRFGKIAEVVPGKSVKECVLHYY 290
                      **************************************97 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.097
                      SBHHHHHHHHHHHH CS
  Myb_DNA-binding   4 WteeEdelLleavk 17 
                      W e E+ l+l + +
       EPX72803.1 518 WDEKEEALILSLAH 531
                      ********998865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (662 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1298  (0.0723967); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.24s 00:00:00.87 Elapsed: 00:00:00.41
# Mc/sec: 4817.17
//
Query:       EPX72804.1  [L=499]
Description: ARF GTPase activating protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.7e-33  112.9   1.1    1.5e-32  112.1   0.2    1.9  2  ArfGap     Putative GTPase activating protein for Arf
  ------ inclusion threshold ------
      0.075   13.2   0.1       0.17   12.0   0.1    1.6  1  Enolase_N  Enolase, N-terminal domain


Domain annotation for each model (and alignments):
>> ArfGap  Putative GTPase activating protein for Arf
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.1   0.2   1.7e-36   1.5e-32       2     111 ..      10     118 ..       9     124 .. 0.93
   2 ?   -3.3   0.1       1.1   9.5e+03      93     113 ..     382     402 ..     363     418 .. 0.60

  Alignments for each domain:
  == domain 1  score: 112.1 bits;  conditional E-value: 1.7e-36
                 HHHHHHCCSCCCCB-TTT-SBS--EEETTTTEEE-HHHHHHHCCS.TTT--EEETTTS---HHHHHHHHHTCHHHHHHHHTTTC-TTTSG-TTCGHHHH CS
      ArfGap   2 kalkellkepenkvCaDCgakeptWaslnlgvflCieCsgvHrslgvhiskvrsltldkwedeelellkalgNkkaneileaklpkeekrskssskekr 100
                 k+l+ l+++ +nkvC+DCgak+ptW s+++gv+lC++Cs+ Hr++gvhis+vrs+ ld+w+ ++l++++ +gN++a+++++++   +  + +++s  k+
  EPX72804.1  10 KILTTLRSQRDNKVCFDCGAKNPTWSSTTFGVYLCLDCSASHRNMGVHISFVRSTVLDSWTYAQLRVMRVGGNENARSFFKRHGGVSLLN-SKDSMIKY 107
                 678999******************************************************************************998888.88888888 PP

                 HHHHHHHHTCH CS
      ArfGap 101 eefirakYeek 111
                 ++  ++ Y+++
  EPX72804.1 108 SSKTAKSYRKE 118
                 88888999876 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.1
                 TTCGHHHHHHHHHHHHTCHTT CS
      ArfGap  93 kssskekreefirakYeekkf 113
                  ++++ +  +f+r+k++ +k 
  EPX72804.1 382 IKKKELNAPTFARDKFSGQKA 402
                 334444455566666665554 PP

>> Enolase_N  Enolase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   1.9e-05      0.17      65     126 ..     324     383 ..     272     386 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1.9e-05
                 HHHHHHTHHHHHTTSBTT-HHHHHHHHHHHH-STT-TTT-HHHHHHHHHHHHHHHHHHHTS- CS
   Enolase_N  65 venvnekiapaligldvtdqeeiDkllielDgtenksklGaNailavSlAvakaaAkakelp 126
                  e+v+e+ ++ +++ + t+ e+  +++ +lD  +  s+lG     a S A +kaaAk++e++
  EPX72804.1 324 SEKVHEVKKETVVQPKTTKNEKPKEIMSDLD--SSFSRLGFGQFAAASNARVKAAAKSREIK 383
                 578999999999*******************..789*********************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (499 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1382  (0.0770818); expected 358.6 (0.02)
Passed bias filter:                      538  (0.0300073); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.29s 00:00:00.87 Elapsed: 00:00:00.47
# Mc/sec: 3194.66
//
Query:       EPX72805.1  [L=331]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.6e-27   94.8   1.1    8.7e-27   94.4   1.1    1.1  1  GCIP            Grap2 and cyclin-D-interacting
  ------ inclusion threshold ------
      0.063   13.6   0.3       0.16   12.3   0.3    1.7  1  Vps39_1         Vacuolar sorting protein 39 domain 1
      0.068   13.7   0.2        9.3    6.9   0.0    2.7  2  NTS             N-terminal segments of PfEMP1
      0.094   12.2   1.0       0.28   10.6   0.6    2.0  3  CAP_N           Adenylate cyclase associated (CAP) N terminal
       0.16   11.8   5.2       0.27   11.1   5.2    1.4  1  Sigma70_ner     Sigma-70, non-essential region
       0.22   11.8   7.7        9.4    6.6   4.7    3.0  3  Mis14           Kinetochore protein Mis14 like
        2.2    8.1   7.2        1.7    8.5   5.6    1.6  2  CBP4            CBP4


Domain annotation for each model (and alignments):
>> GCIP  Grap2 and cyclin-D-interacting
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.4   1.1   3.4e-30   8.7e-27       3     233 ..      49     278 ..      47     296 .. 0.89

  Alignments for each domain:
  == domain 1  score: 94.4 bits;  conditional E-value: 3.4e-30
                 HHHHHHHHHHHHHHHHHTTSSS---HHHHHHHHHHHHHHHHHH.HHHHTTS-GGG-HHHHHHHHHHHHHHHHHHHHHHHHHH--.....---------- CS
        GCIP   3 qklaklvskeaTklslllskpelPsveelqellesifkalsgl.lliyhglpkgaGatLrkevrsavkevvdsvaqLleeivsse....psqskeeetl 96 
                 +++++ +++ +Tkls++  +p+  +  +l+++++++++++s l  ++     +++G+   ++++  v++++ +++ Ll+++  +     ++  k++ +l
  EPX72805.1  49 DSIGEMIHQYTTKLSIAA-RPPITK-DALEKYSNDMSNMVSPLiATLQIYTVDKYGKIIYDRLKMHVERILLGIECLLRSVSPKPlahvTEAWKTRGRL 145
                 678999************.988887.9**************9955555567789***************************999899999999****** PP

                 ----HHHHHHHTTTTS-S.SHHHHHHHHHHHHHHHHHHHHHHHHHHHHH....S------------------TTS--HHHHHHHHHHHHHHHHHHHHHH CS
        GCIP  97 istGvVWeaCdalkklpk.dNktAilraieevlglvkDaleEmkelleeedeeedededdldddedeergnqdrklseeekevikavlkllkatvallk 194
                 + tG+ We+C++l+kl + + ++ +l ++e+ +++++Da+++m++++ +e+++ d ++ +++d+e+e+++   +  ++e+ e +k+ l  l+a++ l+ 
  EPX72805.1 146 VTTGMLWESCEKLQKLGReGALGYVLEEWENFVSMLEDAVSDMEDWKAGESSNWDNFDSEDEDEEEEKENTTSEVRTQEQAESAKQLLRQLNACKILFL 244
                 *************************************************9999999998888887887777778888899999**************99 PP

                 HHHHHHHHH--TT...-HHHHHHHHHHHHHHHHHHHHHH CS
        GCIP 195 klsrsiteegkkdskeqvaqldklldlskeiseqvDdLa 233
                 ++     +  +  +      ld+l + +k  se++D+++
  EPX72805.1 245 SIK----K-HRLPKTASFHYLDDLYEKMKRTSEAIDEVV 278
                 994....3.33344445566*****************97 PP

>> Vps39_1  Vacuolar sorting protein 39 domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.3   6.1e-05      0.16      13      72 ..     225     287 ..     219     309 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 6.1e-05
     Vps39_1  13 kpklvgpLlrleNaCd...lkdveeiLkkekkykeLidlYygkklheeALeLlkeladedeed 72 
                 + + + +Llr  NaC+   l++ ++ L k   ++ L dlY++ k  +eA++  + + +ed ++
  EPX72805.1 225 QAESAKQLLRQLNACKilfLSIKKHRLPKTASFHYLDDLYEKMKRTSEAIDEVVGQFQEDFDN 287
                 677899*********944448899*************************99777777753333 PP

>> NTS  N-terminal segments of PfEMP1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.0    0.0036       9.3       5      15 ..      47      57 ..      46      63 .. 0.88
   2 ?    3.7   0.1     0.035        91       7      18 ..      99     110 ..      98     115 .. 0.87

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0036
         NTS  5 lLDsIGkkVhd 15
                +LDsIG+ +h 
  EPX72805.1 47 MLDSIGEMIHQ 57
                9*********6 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.035
         NTS   7 DsIGkkVhdkvk 18 
                 D++Gk+++d  k
  EPX72805.1  99 DKYGKIIYDRLK 110
                 99*******876 PP

>> CAP_N  Adenylate cyclase associated (CAP) N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.61   1.6e+03      77     128 ..       5      57 ..       3      90 .. 0.81
   2 ?   -3.0   0.0       1.6     4e+03     160     172 ..     127     139 ..     107     141 .. 0.79
   3 ?   10.6   0.6   0.00011      0.28       3      91 ..     177     287 ..     175     304 .. 0.63

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.61
                 HH-HHHHHHHHHHHHHHHHHHHHHHHHHHBE---..HHHHHHHCHHHHHHHHH CS
       CAP_N  77 kiggevaeqaelvkkafeaqrkfllvaskakkPad.seelqelLkplseaiqk 128
                  i++e+ e  ++v   + + rk + +  k + P + +++  ++L  + e i +
  EPX72805.1   5 GIDDEIVESLNKVLGIVVNARKAVSTIDKLNLPVElDNSPLSMLDSIGEMIHQ 57 
                 58888888888888888888888888888888877888888888888777765 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.6
                 --S-HHHHHHHHH CS
       CAP_N 160 vepkPapyvkemk 172
                 v+pkP  +v+e +
  EPX72805.1 127 VSPKPLAHVTEAW 139
                 789******9987 PP

  == domain 3  score: 10.6 bits;  conditional E-value: 0.00011
                 XXXXXXXXXXXXXXX..................XXXXXXXXXXXXXXXXXXXXXXXSXH........................HHHHHHHHHHHHHHHH CS
       CAP_N   3 likRLEaatsrLEdiais........essssasskasssssaaaaaaaaaakaaaaaaaa.......................ksveaFdelisgsvke 70 
                  ++ LE+a+s +Ed ++         +      s+++++++++++++++  ++++a+  +                       +  + F+ ++++  ++
  EPX72805.1 177 FVSMLEDAVSDMEDWKAGessnwdnfD------SEDEDEEEEKENTTSEVRTQEQAE--SakqllrqlnackilflsikkhrlPKTASFH-YLDDLYEK 266
                 5788***********766655443221......111111111111111111111111..1335677888999999999999987777775.56777788 PP

                 HHHHHHHH-HHHHHHHHHHHH CS
       CAP_N  71 fvelskkiggevaeqaelvkk 91 
                 + ++s++i+++v +  e + +
  EPX72805.1 267 MKRTSEAIDEVVGQFQEDFDN 287
                 888899999999887777665 PP

>> Sigma70_ner  Sigma-70, non-essential region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   5.2   0.00011      0.27      21     110 ..     180     283 ..     166     290 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00011
  Sigma70_ner  21 rLrdiidGflDeeeeeeeeeeeedeeeeeeeedddeeeseseaadeeelkeealekfeelreqyeklrk..............alkkkgrkskkyeka 104
                   L+d ++ + D ++ e+++ ++ d+e+e+eee++++++se  +++++e  ++ l+++++++ ++  ++k              +++k +r+s++ +++
   EPX72805.1 180 MLEDAVSDMEDWKAGESSNWDNFDSEDEDEEEEKENTTSEVRTQEQAESAKQLLRQLNACKILFLSIKKhrlpktasfhylddLYEKMKRTSEAIDEV 277
                  5788888888844555555556666666666666678899999999999999*****************99999999975555555555555555555 PP

  Sigma70_ner 105 reelse 110
                    +  e
   EPX72805.1 278 VGQFQE 283
                  555555 PP

>> Mis14  Kinetochore protein Mis14 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.47   1.2e+03      68     122 ..       7      60 ..       5      89 .. 0.71
   2 ?    6.6   4.7    0.0037       9.4      80     131 ..     179     240 ..     166     242 .. 0.80
   3 ?    4.4   0.0     0.017        42      58     106 ..     246     291 ..     240     298 .. 0.79

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.47
                 HHHHHHHCCCHHHHHHCT--HHHHH--..------SSSHHHHHHHHHHHHHHHHH CS
       Mis14  68 aeayakelkaeleeldeyleainelekqekkdpeeddededekerleelvkqyee 122
                 + + +++l++ l ++ ++++a+  ++k  +   e d+ + +    + e++ qy +
  EPX72805.1   7 DDEIVESLNKVLGIVVNARKAVSTIDK-LNLPVELDNSPLSMLDSIGEMIHQYTT 60 
                 566788888888888888888888888.555555555555555555555555554 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0037
                 HHHHCT--HHHHH--...............------SSSHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       Mis14  80 eeldeyleainelek.............qekkdpeeddededekerleelvkqyeeslkslkelk 131
                 + l   ++a+ ++e+             +e++d+ee++e+++   r++e ++ +++ l++l++ k
  EPX72805.1 179 SML---EDAVSDMEDwkagessnwdnfdSEDEDEEEEKENTTSEVRTQEQAESAKQLLRQLNACK 240
                 333...44788888888888888999988999999999********************9999877 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.017
                 HHHHHHHHHHHHHHHHHCCCHHHHHHCT--HHHHH--..------SSSH CS
       Mis14  58 qlRreaPrkiaeayakelkaeleeldeyleainelekqekkdpeedded 106
                  +++ +P+++  +y + l +  ++ +e   ai e+  q ++d ++++++
  EPX72805.1 246 IKKHRLPKTASFHYLDDLYEKMKRTSE---AIDEVVGQFQEDFDNTKDE 291
                 58899*************999999999...8888888555665555554 PP

>> CBP4  CBP4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   5.6   0.00068       1.7      57     122 ..     173     236 ..     171     241 .. 0.72
   2 ?   -3.3   0.0         3   7.8e+03      59      82 ..     261     282 ..     258     293 .. 0.56

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00068
        CBP4  57 eqqelvkivketsksddpiWktgpikspfeknadeklkdkekfekaeaeekqkeelerakeeleei 122
                 e++++v+++ e + sd   Wk+g+  s++++  +e+++++e+ e++  e +++e+ e ak+ l+++
  EPX72805.1 173 EWENFVSML-EDAVSDMEDWKAGES-SNWDNFDSEDEDEEEEKENTTSEVRTQEQAESAKQLLRQL 236
                 778888877.568899999****98.****955555566666677777777777777777666655 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 3
        CBP4  59 qelvkivketsksddpiWktgpik 82 
                 ++l +++k+ts+  d +  +g+ +
  EPX72805.1 261 DDLYEKMKRTSEAIDEV--VGQFQ 282
                 56666666666665553..44444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1876  (0.104635); expected 358.6 (0.02)
Passed bias filter:                      955  (0.0532657); expected 358.6 (0.02)
Passed Vit filter:                        98  (0.005466); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.61u 0.32s 00:00:00.93 Elapsed: 00:00:00.52
# Mc/sec: 1932.26
//
Query:       EPX72806.1  [L=848]
Description: phosphatidylinositol kinase Pik1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.6e-33  114.4   0.1    1.9e-32  113.0   0.1    1.8  1  PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
      2e-17   62.8   0.7    4.9e-17   61.6   0.7    1.7  1  Pik1            Yeast phosphatidylinositol-4-OH kinase Pik1
    1.5e-06   27.7   0.3    4.2e-06   26.3   0.3    1.7  1  PI3Ka           Phosphoinositide 3-kinase family, accessory d
     0.0059   16.0   0.0      0.011   15.1   0.0    1.4  1  DUF4135         Domain of unknown function (DUF4135)


Domain annotation for each model (and alignments):
>> PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.0   0.1   4.3e-36   1.9e-32       2     240 ..     576     785 ..     575     795 .. 0.90

  Alignments for each domain:
  == domain 1  score: 113.0 bits;  conditional E-value: 4.3e-36
                     EEEEEECSSCHHHHHHHHHHHHHHHHHHHHTTTTCCCT-------EEESSSSEEEEE--TTEEEHHHHHHHHHHHCTTSTCHHHHHHHHHCHCHC CS
  PI3_PI4_kinase   2 sagiykvgddlrqdelivqvfklmdeelskennpkrrklalktysviplgrkcgiielvassetaaslldeklekkgvpptasveslrvaldkkk 96 
                     +++i+k g dlrq+   +q++  +  ++++ + + +    l++++++ +g+++g+ie + ++ +++s+ ++         + ++e+     ++++
      EPX72806.1 576 VSVIVKTGADLRQETFACQLIHAFRRVWQESKDKVW----LRRMKILVTGDSSGLIETITNAISVHSIKKNLT-------REMQEA-----EMSE 654
                     5899********************************....****************************99987.......446777.....4444 PP

                     CHHHHHCCHHHHHHTSSTTHHHHHHHHHSSSH..HHHHHHHHHHHHHHHHHHHHHHHHT-TT--TTTEEEETTTSEEEESSTTTCCTCSHCSSSS CS
  PI3_PI4_kinase  97 lkkekklkfekrtalkpksgllqeFvkkspsa..eewlearkqFvrslaklsvldyilgngDRhldNilvdktsgklihIDfGlilpdewkllpf 189
                      k+ +          k    l+++Fvk++  +  + + +a ++F++sl  +s+++y+l++ DRh++Nil+ + +g+l+hIDfG+ l++ + + +f
      EPX72806.1 655 GKVSG----------KGVATLKDYFVKRFGPPnsDRYYQAQTNFIQSLVAYSIISYLLQLKDRHNGNILI-DSDGHLVHIDFGFLLTNTPGNVGF 738
                     43333..........34489*********8776689999*******************************.***********************9 PP

                     -.SSSSSS-THHHHHHTSTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHH CS
  PI3_PI4_kinase 190 pqekvPfrltrelvlaidpskdeglfresceealealrrdqnlltrllkka 240
                     +  + Pf+lt ++ + +  +  +  fr+++ +a++++r+ ++ ++ l + +
      EPX72806.1 739 E--SAPFKLTADYLEIL--DNRFDEFRSLMKKAFKSVRKRADQIILLVEVM 785
                     5..9*************..********************999988777766 PP

>> Pik1  Yeast phosphatidylinositol-4-OH kinase Pik1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.6   0.7   1.1e-20   4.9e-17       1      49 [.     110     156 ..     110     157 .. 0.96

  Alignments for each domain:
  == domain 1  score: 61.6 bits;  conditional E-value: 1.1e-20
                 --TTHHHHHHHHHHT--SS-SS.----TT--SS-SHHHHHHHHHHHHHT CS
        Pik1   1 SygFqvcrrvlNklQfilFnlsaseqkkkkkfrENvsPalvLssavlss 49 
                 S++F++c+r++N++Q ++F++s  + ++++k++ENvsPal+Ls+++l++
  EPX72806.1 110 STSFKICKRLYNRIQVLVFMTS--SFQSQQKISENVSPALILSGIMLGG 156
                 89********************..999*******************986 PP

>> PI3Ka  Phosphoinositide 3-kinase family, accessory domain (PIK domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.3   0.3   9.4e-10   4.2e-06      86     161 ..      30     106 ..      25     132 .. 0.86

  Alignments for each domain:
  == domain 1  score: 26.3 bits;  conditional E-value: 9.4e-10
                 TTS--.HHHHHHHHHHHHHSHHHHHHHHHHHHHHHHGGSSSSSSHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCCTH CS
       PI3Ka  86 skfkd.esvreyavkvLekasdeelllYllQLVqalkyepikdsalaefLlkralknkrlghfffWyLkseiedkev 161
                 s +++   + ++  ++L ++s ee++++++QL+  +     +  al+ f+++   +n + +   fWyL++ + d ++
  EPX72806.1  30 SRYPNnIGIHHFLCEKLASFSYEEIEFFIPQLIHLVLNKDAESVALEDFIIHECERNTQCALITFWYLQAHMVDLSL 106
                 5677768899999*********************999999******************************9965544 PP

>> DUF4135  Domain of unknown function (DUF4135)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   2.5e-06     0.011     133     182 ..     686     736 ..     657     775 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 2.5e-06
     DUF4135 133 erfYrraGallallyllggtDlheeNl.iasgeqpvliDlEtlltheaeks 182
                 ++f + + a+  ++yll+ +D h++N+ i s +++v iD+  llt++  + 
  EPX72806.1 686 TNFIQSLVAYSIISYLLQLKDRHNGNIlIDSDGHLVHIDFGFLLTNTPGNV 736
                 5666777788899**************999**************8844444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (848 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       780  (0.0435049); expected 358.6 (0.02)
Passed bias filter:                      554  (0.0308997); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.79u 0.35s 00:00:01.14 Elapsed: 00:00:00.53
# Mc/sec: 4846.19
//
Query:       EPX72807.1  [L=663]
Description: AGC/AKT protein kinase Sck2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.7e-65  219.3   0.0      9e-65  218.6   0.0    1.3  1  Pkinase        Protein kinase domain
    2.2e-26   92.7   0.0    3.1e-26   92.2   0.0    1.2  1  Pkinase_Tyr    Protein tyrosine kinase
    1.8e-10   41.4   2.2    5.6e-10   39.8   2.2    1.9  1  Pkinase_C      Protein kinase C terminal domain
    5.3e-08   32.5   0.0    9.3e-08   31.7   0.0    1.4  1  Kinase-like    Kinase-like
     0.0013   18.8   0.0     0.0022   18.0   0.0    1.4  1  APH            Phosphotransferase enzyme family
     0.0038   16.9   0.0       0.54    9.9   0.0    2.3  2  FTA2           Kinetochore Sim4 complex subunit FTA2
  ------ inclusion threshold ------
      0.016   14.1   0.0       0.04   12.9   0.0    1.6  2  Haspin_kinase  Haspin like kinase domain
      0.023   14.1   0.0      0.035   13.5   0.0    1.3  1  Kdo            Lipopolysaccharide kinase (Kdo/WaaP) family
      0.085   12.8   0.0       0.18   11.8   0.0    1.5  1  Adeno_E3_15_3  Adenovirus 15.3kD protein in E3 region


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  218.6   0.0   4.5e-68     9e-65       2     264 .]     288     548 ..     287     548 .. 0.93

  Alignments for each domain:
  == domain 1  score: 218.6 bits;  conditional E-value: 4.5e-68
                 EEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHS...CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS-- CS
     Pkinase   2 ekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklk...hpnivrlyevfeekdelylvleyveggeladllerkgsls 96 
                 e l+ +G+G+fG+Vy +++k+t++i+A+K+++k+ +  +ke  +++ E  il ++    +p+iv l  +f+++++lylv++y+ ggel+ +l+++  ++
  EPX72807.1 288 EPLKLIGKGTFGQVYLVRKKDTRRIYAMKILSKKVIVRRKEvAHTIGERDILVQTAaadSPFIVALRFSFQTPKDLYLVTDYMAGGELFWHLQKSIRFP 386
                 66799********************************999999********98887778***********************************9**** PP

                 HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEE.SSSSCSBCTTTSCGGGS-HHHH.TTSCBSHHHHHHHHHHHHHHHHHS CS
     Pkinase  97 eeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlake.lessskltsfvgtseYlAPEvl.keneyskkvDvWslGvilyelltg 193
                 e++ak++++++l +l+ lH++gi++rDlKpeNiL+d +g++ ++DFGl+k  l+ +s++++f+gt +YlAPEv+ +e +y+  vD WslGv+lye+++g
  EPX72807.1 387 EARAKFYIAELLLALQALHKRGIVYRDLKPENILLDVQGHIALCDFGLSKAnLTVGSTTRTFCGTTDYLAPEVIlDEGGYDMMVDFWSLGVLLYEMTCG 485
                 *************************************************852667777****************9999********************* PP

                 S-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHH.TTS-HHHHHHHHHHT-SSGCCSTT....HHHHHTSGGG CS
     Pkinase 194 kppfsgekgkekvekeldqlekilkilgetkeklpea.seiseeakdllkkllkkdpkkRlt....aeellqhpyl 264
                   pf++e++++ +++++               k++ +   +s ea+dl+k ll+++ k+Rl+    aee+++h ++
  EPX72807.1 486 WSPFYAENTQQLYKNIVFG-------------KVRFPrGLLSAEARDLIKLLLNRNSKNRLGangdAEEVKRHAFF 548
                 *****99999988888888.............223330347*********************99999999999987 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.2   0.0   1.5e-29   3.1e-26       5     249 ..     291     532 ..     287     536 .. 0.83

  Alignments for each domain:
  == domain 1  score: 92.2 bits;  conditional E-value: 1.5e-29
                  EEEEEESSEEEEEEEEETTTTSSEEEEEEEEEST..TSSHHHHHHHHHHHHHHHTS...-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCT CS
  Pkinase_Tyr   5 kklGeGafGkVvegtlkgekekkevkVavKtlke..eateeekeelleeakimkkl...khpnivkllgvctkeepllivteyvkgGdLlkfLrkkek 97 
                  k +G+G+fG+V+  + k    +++   a+K+l++    +++e ++ + e +i+ ++   + p iv+l       + l++vt+y++gG+L  +L+k+  
   EPX72807.1 291 KLIGKGTFGQVYLVRKK----DTRRIYAMKILSKkvIVRRKEVAHTIGERDILVQTaaaDSPFIVALRFSFQTPKDLYLVTDYMAGGELFWHLQKS-- 382
                  789*********99988....666777777775511467777888999999998865567899****9999999********************98.. PP

                  TTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE.EEHHHHHHHHHHH CS
  Pkinase_Tyr  98 ekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk.ftsksDvWsfGvl 194
                   ++   +   +++++  +++ L+++ +v rdl   N+Ll+ + ++ ++DfGL+++       +++++      ++apE++ ++  +    D Ws Gvl
   EPX72807.1 383 IRFPEARAKFYIAELLLALQALHKRGIVYRDLKPENILLDVQGHIALCDFGLSKAN--LTVGSTTRTFCGTTDYLAPEVILDEGgYDMMVDFWSLGVL 478
                  777778888889999***************************************88..333344445556889******977665************* PP

                  HHHHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS CS
  Pkinase_Tyr 195 lwEiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeR 249
                  l+E+ + g sp+   +++++++++  gk        ++e  +l+k  ++++ ++R
   EPX72807.1 479 LYEMTC-GWSPFYAENTQQLYKNIVFGKVRFPRGLLSAEARDLIKLLLNRNSKNR 532
                  ***988.********9999999996666555555578888888888888888777 PP

>> Pkinase_C  Protein kinase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.8   2.2   2.8e-13   5.6e-10       1      46 []     569     616 ..     569     616 .. 0.91

  Alignments for each domain:
  == domain 1  score: 39.8 bits;  conditional E-value: 2.8e-13
   Pkinase_C   1 vesdeDtsNFDpeFTeedprdtppddm..pagspltssvqenFrGFtY 46 
                 ve++ D+sNFD eFT+ +++   ++    + + pl+s vq+ F+GFtY
  EPX72807.1 569 VEGEFDVSNFDVEFTNKEVPADFVAVGdmSTSAPLSSTVQNGFKGFTY 616
                 899***************77776666688******************9 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.7   0.0   4.7e-11   9.3e-08     138     288 .]     388     532 ..     362     532 .. 0.78

  Alignments for each domain:
  == domain 1  score: 31.7 bits;  conditional E-value: 4.7e-11
  Kinase-like 138 hkkletiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvlseve.....kgfaPpEllgsrggytrknktkmthk 230
                  ++   +ia+lll l      + L+++g+v  +++++n+lld +g + l +f+ L +a   v  s++        +  pE++   ggy +         
   EPX72807.1 388 ARAKFYIAELLLAL------QALHKRGIVYRDLKPENILLDVQGHIALCDFG-LSKANLTVG-STTRtfcgtTDYLAPEVILDEGGYDM--------M 469
                  34444555555555......99*****************************7.555544444.333334455678899999999*9988........7 PP

  Kinase-like 231 ldaWqlGlviyriwclklPl.tlateeakeewkfklck.k...ipekvkaLlkkfLqlsqedR 288
                  +d W lG+  y + c   P+  + t++  ++  f +++ +    + + + L+k +L++++++R
   EPX72807.1 470 VDFWSLGVLLYEMTCGWSPFyAENTQQLYKNIVFGKVRfPrglLSAEARDLIKLLLNRNSKNR 532
                  9******************9345677777888999998752335789999*********9998 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   1.1e-06    0.0022     135     197 ..     373     436 ..     296     441 .. 0.75

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 1.1e-06
                 CCCGCCTCC...HHHHHHHHHHHHHHHH--SSS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-E CS
         APH 135 rllaselld...lleeleeqvlaalaallpgelptvllHgDlhpgNllvdpddgrvtGviDfedag 197
                 + l   l++     e++++  +a+l+  l++  +++++ +Dl+p N+l+d  +g++ ++ Df++++
  EPX72807.1 373 GELFWHLQKsirFPEARAKFYIAELLLALQALHKRGIVYRDLKPENILLD-VQGHI-ALCDFGLSK 436
                 55555555555323344444888888888889******************.77887.*****9876 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.012        24      20      54 ..     283     319 ..     274     346 .. 0.83
   2 !    9.9   0.0   0.00027      0.54     176     211 ..     392     432 ..     367     435 .. 0.78

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.012
        FTA2  20 aekdiefleyLgkglhsiVlkvkirgk..eYALKlFr 54 
                 a++d+e l+++gkg+ ++V+ v+ ++   +YA+K+  
  EPX72807.1 283 APEDFEPLKLIGKGTFGQVYLVRKKDTrrIYAMKILS 319
                 4579999*************999987656*****865 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00027
        FTA2 176 sqlpkllrdlkklhklgIvvrDlkeenyi...dgk..LvDl 211
                  ++ +ll  l+ lhk gIv rDlk+en++   +g   L+D+
  EPX72807.1 392 FYIAELLLALQALHKRGIVYRDLKPENILldvQGHiaLCDF 432
                 56789999*******************97333332225666 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0         2     4e+03      98     128 ..     283     313 ..     268     332 .. 0.70
   2 ?   12.9   0.0     2e-05      0.04     230     257 ..     411     438 ..     352     453 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 2
  Haspin_kinase  98 neadlasllndseklssevyqtkekdkevvl 128
                     ++d ++l+  +++ +++vy +++kd+  ++
     EPX72807.1 283 APEDFEPLKLIGKGTFGQVYLVRKKDTRRIY 313
                    4555666666689999999999997776553 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 2e-05
  Haspin_kinase 230 HRdLhldniLvdknlnvtlidlklsRle 257
                     RdL+ +niL+d ++++ l+d+ ls+++
     EPX72807.1 411 YRDLKPENILLDVQGHIALCDFGLSKAN 438
                    6************************998 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.7e-05     0.035     106     170 ..     376     436 ..     305     446 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.7e-05
         Kdo 106 edllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDldkar 170
                   +l+k  +++e++ +  + ++  + + lh++g+  +dl + nill+ ++    +i+l D+  ++
  EPX72807.1 376 FWHLQKSIRFPEARAKFYIAELLLALQALHKRGIVYRDLKPENILLDVQG----HIALCDFGLSK 436
                 5566665557777777788888889999**********************....999*9996555 PP

>> Adeno_E3_15_3  Adenovirus 15.3kD protein in E3 region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0     9e-05      0.18      52     111 ..     311     372 ..     280     375 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 9e-05
  Adeno_E3_15_3  52 ktttgnrlsyklptqrqklvlmvgekpitvtqhsaete..gclhfpyqgpedlctliktmcg 111
                    +  + + ls k+  +r+++   +ge+ i v   +a++    +l+f +q p+dl  +   m+g
     EPX72807.1 311 RIYAMKILSKKVIVRRKEVAHTIGERDILVQTAAADSPfiVALRFSFQTPKDLYLVTDYMAG 372
                    4455677999********************99999986226799*********988888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (663 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       506  (0.0282224); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.74u 0.35s 00:00:01.08 Elapsed: 00:00:00.54
# Mc/sec: 3704.34
//
Query:       EPX72808.1  [L=193]
Description: 60S ribosomal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      3e-33  113.8   5.6      3e-33  113.8   5.6    2.0  2  Ribosomal_L24e  Ribosomal protein L24e
  ------ inclusion threshold ------
      0.069   13.4   0.8       0.25   11.7   0.1    2.0  2  DUF2175         Uncharacterized protein conserved in archaea 


Domain annotation for each model (and alignments):
>> Ribosomal_L24e  Ribosomal protein L24e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.8   5.6   3.4e-37     3e-33       1      64 [.       1      64 [.       1      66 [. 0.98
   2 ?   -1.7   0.2      0.38   3.4e+03      34      44 ..     102     112 ..      94     127 .. 0.70

  Alignments for each domain:
  == domain 1  score: 113.8 bits;  conditional E-value: 3.4e-37
                    XXX-B-TTT-SB--SS--EEEE-TTS-EEEESSHHHHHHHHTT--GGGSTTSTTT-XXXXXXXX CS
  Ribosomal_L24e  1 mktekCsFsgykiyPGhGkrfvrnDgkvfrFlssKceklfkqkrnPrklkWTkayRrahkkelt 64
                    m++ +C+F++ ++yPGhG++fvrnD+kvfrF++sKc+k+fk+krnPrk++WTk yR+ah+ke++
      EPX72808.1  1 MRVFTCYFCSGPVYPGHGIMFVRNDSKVFRFCRSKCHKNFKMKRNPRKVAWTKSYRKAHGKEMV 64
                    9999*********************************************************986 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.38
                     HHHHHHHHTT- CS
  Ribosomal_L24e  34 sKceklfkqkr 44 
                     +K e++f +kr
      EPX72808.1 102 AKRERMFFKKR 112
                     66777776665 PP

>> DUF2175  Uncharacterized protein conserved in archaea (DUF2175)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   2.7e-05      0.25       3      66 ..       4      70 ..       2      85 .. 0.74
   2 ?    0.1   0.1      0.11   9.8e+02      37      70 ..     111     143 ..      83     170 .. 0.61

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 2.7e-05
     DUF2175  3 wkCyiCgkeivegekFTft.kkgvvHyeClvekarkklkes...edaaaLleleevlneeivklkele 66
                ++Cy+C++ ++ g+   f+ +++ v   C ++k +k++k +    ++a  ++  +   +e+v+ k+l+
  EPX72808.1  4 FTCYFCSGPVYPGHGIMFVrNDSKVFRFC-RSKCHKNFKMKrnpRKVAWTKSYRKAHGKEMVYDKALA 70
                89*****************8889998888.55555555554435666666666666777777777665 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.11
     DUF2175  37 kklkesedaaaLleleevlneeivklkelervae 70 
                 k+l+  ++ + L e+ +++ + + +  e e+v+e
  EPX72808.1 111 KRLSG-KKSQQLAEARKLIGQNVPQFAEKETVEE 143
                 33333.5556666666666666666666666643 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1081  (0.0602934); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.32s 00:00:00.89 Elapsed: 00:00:00.55
# Mc/sec: 1061.36
//
Query:       EPX72809.1  [L=860]
Description: histone lysine methyltransferase Set3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      4e-09   36.2   9.1    7.6e-09   35.3   9.1    1.5  1  PHD       PHD-finger
    0.00046   19.7   4.1    0.00095   18.7   4.1    1.5  1  PHD_2     PHD-finger
      0.002   18.6   2.9     0.0028   18.1   0.0    2.6  2  SET       SET domain
  ------ inclusion threshold ------
      0.089   12.8   2.8       0.24   11.5   2.8    1.8  1  zf-CW     CW-type Zinc Finger


Domain annotation for each model (and alignments):
>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   9.1   1.7e-12   7.6e-09       1      51 [.       5      50 ..       5      51 .. 0.93

  Alignments for each domain:
  == domain 1  score: 35.3 bits;  conditional E-value: 1.7e-12
                SBTTTTSTTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSSTBSSTTTHT CS
         PHD  1 rCavCkkksdeeeelvqCdgCkrwfHqkClkppleseekpegewlCekCke 51
                rC vC   +d++++++qC++C+ w+H  C +++ e  ++pe ++lCe+C++
  EPX72809.1  5 RC-VCPF-DDDDGFTIQCENCEVWQHAVCFEISSE--NVPE-NYLCEQCQP 50
                69.****.9************************88..7776.9******97 PP

>> PHD_2  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   4.1   2.1e-07   0.00095       5      35 ..      18      48 ..      15      49 .. 0.95

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 2.1e-07
       PHD_2  5 lsCdkCsvaVHasCYGvskesdgeeWlCrrC 35
                ++C +C+v  Ha C  +s+e++ e +lC+ C
  EPX72809.1 18 IQCENCEVWQHAVCFEISSENVPENYLCEQC 48
                89*********************9******* PP

>> SET  SET domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   6.2e-07    0.0028     105     167 ..     267     326 ..     205     327 .. 0.82
   2 ?   -3.9   3.6       3.6   1.6e+04      96      96 ..     616     616 ..     383     783 .. 0.60

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 6.2e-07
                 CCCHEEEETEEEEEECCCGTTGGGCEEXSSSSEEEEEEEE....TTSSEEEEEESSXBXTTEEEEEX CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxx RF
         SET 105 aiagysidaralksgngagplarflNHsCdpNcnltvqnv....lrgprvavfAtrdIkkGeEltid 167
                 + + ++id  a+ +g+ +    rf+  sC+pNc + ++++       p ++++  ++I+   Elt+d
  EPX72809.1 267 EKSDLVID--ARVAGSKS----RFVRRSCQPNC-TVISYQneadAFAPSFYLVPVKPIESESELTVD 326
                 45566789..6699****....***********.44444489***********************97 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 3.6
                 X CS
                 x RF
         SET  96 s 96 
                 +
  EPX72809.1 616 R 616
                 0 PP

>> zf-CW  CW-type Zinc Finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   2.8   5.4e-05      0.24       1      34 [.      16      49 ..      16      60 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 5.4e-05
       zf-CW  1 ywVqCdkClKWRr.lptevdkselipekWvCsmnp 34
                +++qC++C+ W   + +e+ +++ +pe++ C++ +
  EPX72809.1 16 FTIQCENCEVWQHaVCFEISSEN-VPENYLCEQCQ 49
                589********998999975555.5*******976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (860 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       819  (0.0456802); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.64u 0.29s 00:00:00.93 Elapsed: 00:00:00.45
# Mc/sec: 5712.09
//
Query:       EPX72810.1  [L=632]
Description: type I ferredoxin Etp1/cytochrome oxidase cofactor Cox15 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     4e-109  364.6   8.8   4.8e-109  364.4   8.8    1.1  1  COX15-CtaA  Cytochrome oxidase assembly protein
    5.6e-13   48.7   0.3    9.2e-13   48.0   0.3    1.4  1  Fer2        2Fe-2S iron-sulfur cluster binding domain
  ------ inclusion threshold ------
      0.038   14.4   0.0       0.12   12.7   0.0    1.9  2  Prim-Pol    Bifunctional DNA primase/polymerase, N-terminal


Domain annotation for each model (and alignments):
>> COX15-CtaA  Cytochrome oxidase assembly protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  364.4   8.8    8e-113  4.8e-109       2     323 ..     101     458 ..     100     459 .. 0.96

  Alignments for each domain:
  == domain 1  score: 364.4 bits;  conditional E-value: 8e-113
  COX15-CtaA   2 rwlllvlllvllvvvlGgltRltdsGlsitdWppctGalppltdeeweaefekyketpeykkl.agmtlaefkaiawiEwiHRllgrllGllilvplly 99 
                  wll++++lvl++vv+Gg+tRlt+sGlsit+W+p++G++pplt+e+w++efe yk++pe++kl + mt++efk+i+++Ew+HR+lgr +Glli+vp +y
  EPX72810.1 101 FWLLGSSALVLAIVVVGGITRLTESGLSITEWKPVSGVIPPLTSEQWDQEFELYKQSPEFQKLnSRMTVDEFKHIFFWEWFHRVLGRGIGLLIAVPSFY 199
                 7************************************************************************************************** PP

  COX15-CtaA 100 flakkrisrelkkllllllllvglQGllGwwmVksgLse.......kprvspyrlaaHLllaflllalllwlalrllake..............aesae 177
                 +la+++ s++lk++ll+l++lv+lQG++GwwmVksgLs+       +prvs+yrla+HL++a++l+++l+w+++ +l+++              +++++
  EPX72810.1 200 MLARGKSSPWLKRRLLGLTGLVALQGVIGWWMVKSGLSKqlledgsHPRVSHYRLATHLAAAVALYIGLVWTGHGILQRHaflkslkngtfssiNNMVT 298
                 *************************************99****************************************99*99998877755444999 PP

  COX15-CtaA 178 eeaaakklrllallllallllqialGalvagldAglayntfplmgge.lipdklplc...........eldwrnlfenpatvqfaHRllAilvllvlll 264
                 +++++k+lrl a  l++l+l+++++GalvagldAg++y+tfp mg++ l+p+k +l+           +l wrn+++np++vq+ HR lA++++l+++ 
  EPX72810.1 299 SVKSMKGLRLGASSLVGLILTTLLSGALVAGLDAGMIYCTFPAMGEGrLAPPKEELFdvrysrkddhsDLYWRNMLDNPSLVQLQHRALAVTTFLTACG 397
                 ********************************************977699*999999****************************************** PP

  COX15-CtaA 265 lailllrkars..pklarlavllaallllQvalGistvllavplslavaHqlgaallllal 323
                 +++ +  k+r+  +k++++  +++++l++Q+ lGi+t+++ vp++lav+Hq+g+++ l+a+
  EPX72810.1 398 IFLYVQLKKRTlpKKISTSVSIATGALTAQAGLGILTLIHVVPVPLAVLHQAGSLVALTAA 458
                 *8888888777977788888888***********************************987 PP

>> Fer2  2Fe-2S iron-sulfur cluster binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.0   0.3   1.5e-16   9.2e-13       1      77 [.     526     608 ..     526     609 .. 0.91

  Alignments for each domain:
  == domain 1  score: 48.0 bits;  conditional E-value: 1.5e-16
                 EETTTEEEEEEEETTTHBHHHHHHHTTTTTSTTSSSSSS.SSTTEEEEEESCE.CTT.SSSSTHHHHHTTEE.....EEGGGSEE CS
        Fer2   1 itidgkevevevadgettlldaaeenggidipysCgggg.CgtClvevlegev.qsd.etelegeeldegkl.....rlaCqtiv 77 
                 +t++g+ev +e ++g++ +ld a +n +id++ +C+g+  C+tC+v v+ +++   + ++e+e+++ld ++      rl Cq+i+
  EPX72810.1 526 VTPEGREVLIEGNEGDS-ILDLAHSN-NIDLEGACEGSVaCSTCHVVVDPEHYeLLEaPEEDEEDMLDLAFGleetsRLGCQVIL 608
                 5789*************.99999999.9*********99**********999995556899999999888889*********986 PP

>> Prim-Pol  Bifunctional DNA primase/polymerase, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       1.1   6.7e+03     120     146 ..     172     210 ..     132     215 .. 0.60
   2 ?   12.7   0.0     2e-05      0.12      71     149 ..     490     582 ..     427     592 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.1
    Prim-Pol 120 g.........ldlrgeg.gyvvappsvh..etgraYrwl 146
                            ++ g+g g ++a ps+   ++g++  wl
  EPX72810.1 172 FkhiffwewfHRVLGRGiGLLIAVPSFYmlARGKSSPWL 210
                 134555555556668888888888888766666666666 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 2e-05
    Prim-Pol  71 ealarLareeg..plPe..tvtvttgstgggrhlyfraPdglalpnsagklapg........ldlrgeggyvvappsvh..etgraYrwledp 149
                  + ++L ++++    P+  + + +++++g+g+++yf+ P+g ++  + ++            +dl g+   +va  + h   + ++Y+ le+p
  EPX72810.1 490 PVTNALNQKRTfhSFPVlrHSASQKPAPGTGIKVYFVTPEGREVLIEGNEGDSIldlahsnnIDLEGACEGSVACSTCHvvVDPEHYELLEAP 582
                 556677777778888886667777899********************9998777888888889999999999999999988777889999766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (632 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       600  (0.0334653); expected 358.6 (0.02)
Passed bias filter:                      468  (0.026103); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.28s 00:00:00.90 Elapsed: 00:00:00.46
# Mc/sec: 4107.43
//
Query:       EPX72811.1  [L=715]
Description: kexin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-36  126.5   0.1    1.7e-36  126.0   0.1    1.2  1  Peptidase_S8   Subtilase family
    8.5e-25   86.6   0.0    1.8e-24   85.6   0.0    1.6  1  P_proprotein   Proprotein convertase P-domain
     0.0068   17.2   0.0      0.014   16.1   0.0    1.6  1  S8_pro-domain  Peptidase S8 pro-domain


Domain annotation for each model (and alignments):
>> Peptidase_S8  Subtilase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.0   0.1   2.9e-40   1.7e-36       1     298 []     162     440 ..     162     440 .. 0.79

  Alignments for each domain:
  == domain 1  score: 126.0 bits;  conditional E-value: 2.9e-40
                   -TT-EEEEECS-B-TT-TTTGGGEEE..EEEE---TTSG.GGEETT-SS-TT-SC-SSS....HHHHHHHHHH-B..SSSSSB-SSTTSEEEEEE-S CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_S8   1 gkgvlvavlDtGvdpshpdlsvttdgerklvdvideegagfngadsettstnwarddngnsieHGthvAGiaaanapeegekngvapgakilsvkvl 97 
                   g++v+va +D+G+d  hpdl++ + +  + +         fn++ +++     + +d++    HGt++AG +a+  +++ + +g+ap+ak++++++l
    EPX72811.1 162 GENVTVAFVDDGIDFRHPDLQAAYSSLGSWD---------FNDNMADPL---PKLSDDL----HGTRCAGEVAGA-WNDVCGVGIAPKAKVAGLRIL 241
                   789******************5544444432.........444433333...3333334....************.********************* PP

                   STTSB-HH..HHHHHHHHHHHHCT-SEEEE-EESCETTCHHCHHHHHH.......HHHHHH.CCT-EEEEE--SS-T-HHEEE-TTCEECTTTSTTC CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_S8  98 dtsggsmetgteliraieeaaedkvdvinmslgestslpktgrsieal.......ainravnkkgvlvviSaGNngktgsslqagspvgtpstsknv 187
                   +++ +   +     +a+++ ++   +++++s+g + ++++  + ++ +        + +++n  g+++v+++GN g +++  +++ +++t+s +   
    EPX72811.1 242 SAPINDVVE----SEALNYGFQ-TNHIYSCSWG-PADDGRAMEAPRLAtrralinGVINGRNGLGSVFVFASGNGGHYRD--NCNFDGYTNSIFS-- 328
                   998854432....344555555.888*******.888888888888778899888555666699****************..***********99.. PP

                   EEEEEESTTSSB-TT--B-TT.......-EEEE-S-CCCCCCCCCHHHTTTHHEEEE-SHHHCHHHHHHHHHHHHHHHTT--HHHHHHHHHCCS-EE CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_S8 188 itvgayttegkiapfSsrGpssdgklkpdivapGgnivstwsrqsnnsaglssyqsmsGTSmAsPnaagaaAlllsalpkltpetvraallntAqdl 284
                   itvga++ + ++  +S+ + ++       i+a+ + + +++ + +    g++ ++s+ GTS+A+P+a+++ Al ls  p+lt+++++++ +++A + 
    EPX72811.1 329 ITVGAVDMDHQVPFYSEICAAQL------ISAYSSGSRRSIATTN--PEGTC-TKSHGGTSAAAPLASAVYALALSIRPDLTWRDIQHITVHSAVPF 416
                   **********************7......9999888444444444..22233.789**************************************887 PP

                   ................SSSSSSTT CS
                   ..........xxxxxxxxxxxxxx RF
  Peptidase_S8 285 ..........gkadniesfaqGaG 298
                               a    s+++G+G
    EPX72811.1 417 dvspdlewtkTPAGFQFSHRFGFG 440
                   777777775433333455556665 PP

>> P_proprotein  Proprotein convertase P-domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.6   0.0     3e-28   1.8e-24       1      86 []     504     589 ..     504     589 .. 0.98

  Alignments for each domain:
  == domain 1  score: 85.6 bits;  conditional E-value: 3e-28
                   EEEEEEEEEEEESSGGGEEEEEE-TTS-EEEEE---TT---SS-EEEEEEEESTTTTS---EEEEEEEEESSTT--EEEEEEEEEE CS
  P_proprotein   1 lehvqvsvnithtrrgdlritLvsPsGtrsvLlnrrgkdksrsgfldwtfmsthlwgeraeGeWkLevkdseeedtgtlkswkLrl 86 
                   le+++v+v+i  t+rg ++i+L sP+G rs+L + r+ d++++gf +wtfm++++w+e+  G+WkL v+d++++  g+++ w+L +
    EPX72811.1 504 LEQITVKVSIPFTCRGAMTIELESPAGIRSMLATLRPYDQNNEGFPEWTFMTVQHWSESIIGSWKLIVRDHSNGCSGRFNYWQLAF 589
                   699********************************************************************************975 PP

>> S8_pro-domain  Peptidase S8 pro-domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   2.3e-06     0.014       1      79 []      40     110 ..      40     110 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 2.3e-06
  S8_pro-domain   1 sWaVrlkeggeeeAdrvAkkhgfenlgqigeleghYlfrhsepkkrskrslrhkreerLakdpkVkwaeqqevlkRvKR 79 
                    +++V+l++  +++    A++ g ++++++ +l++hYlf   ++++ s++ l+++     +++  + ++e+q  + R KR
     EPX72811.1  40 EFMVHLDP--KSDPYLTADAIGATYVRPMRNLKNHYLFAI-QSSNSSRNTLQKR-----NAELGILNFEEQIPRWRYKR 110
                    58899953..45578889999******************9.3334444444444.....56778999999999888888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (715 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       552  (0.0307881); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.26s 00:00:00.91 Elapsed: 00:00:00.44
# Mc/sec: 4867.17
//
Query:       EPX72812.1  [L=97]
Description: RNA polymerase I upstream activation factor complex subunit Rrn10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.5e-18   67.2   0.1      2e-18   66.7   0.1    1.5  1  UAF_Rrn10  UAF complex subunit Rrn10
     0.0014   18.7   0.1      0.002   18.2   0.1    1.3  1  SSPI       Small, acid-soluble spore protein I


Domain annotation for each model (and alignments):
>> UAF_Rrn10  UAF complex subunit Rrn10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.7   0.1   2.3e-22     2e-18      64     120 .]      40      97 .]       6      97 .] 0.93

  Alignments for each domain:
  == domain 1  score: 66.7 bits;  conditional E-value: 2.3e-22
   UAF_Rrn10  64 Pdld.lrvvqdyatelllakykkliealdesslltlGllvekwvkdyltdileeqerr 120
                 Pd d l+++qd+++e+++a++k+++e++de++ll+lG+l ++w++ +++++lee+e++
  EPX72812.1  40 PDSDlLHSIQDFSAEYMMATGKESLESMDETALLGLGFLFTEWMNGMVSECLEEFEEK 97 
                 665537*************************************************986 PP

>> SSPI  Small, acid-soluble spore protein I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.1   2.3e-07     0.002       8      50 ..      45      87 ..      42      96 .. 0.85

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 2.3e-07
        SSPI  8 iqnlkgsskeeleetIedaiqskeEktLpGLGVlfeliWknas 50
                ++ +++ s e + +t +++ +s +E++L GLG lf  + + + 
  EPX72812.1 45 LHSIQDFSAEYMMATGKESLESMDETALLGLGFLFTEWMNGMV 87
                5677888899999999*******************98877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       258  (0.0143901); expected 358.6 (0.02)
Passed bias filter:                      241  (0.0134419); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.26s 00:00:00.63 Elapsed: 00:00:00.42
# Mc/sec: 698.43
//
Query:       EPX72813.1  [L=333]
Description: alpha-1,2-galactosyltransferase Gmh3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-78  264.1   0.0    1.5e-78  263.8   0.0    1.1  1  Glyco_transf_34  galactosyl transferase GMA12/MNN10 family
  ------ inclusion threshold ------
      0.015   15.3   0.0      0.024   14.6   0.0    1.5  1  Nucleotid_trans  Nucleotide-diphospho-sugar transferase
        0.2   10.7   0.0       0.26   10.3   0.0    1.1  1  DevR             CRISPR-associated negative auto-regulator De


Domain annotation for each model (and alignments):
>> Glyco_transf_34  galactosyl transferase GMA12/MNN10 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  263.8   0.0   2.5e-82   1.5e-78       2     239 .]      87     322 ..      86     322 .. 0.97

  Alignments for each domain:
  == domain 1  score: 263.8 bits;  conditional E-value: 2.5e-82
  Glyco_transf_34   2 epeivlllvsnekkcenssgdhelllkvikNrvdYaekhgyeifykkvsallaeemnsvWaklpairaamkkyPeaewiWwlDqdAlimnmdls 95 
                      ++eiv+ll+s+ k++   +  h +++++i+Nrv Ya+ h+y ++y++vs+++    + vWak+pai ++m+k+P+a+wiWwlDqdAli+n++ls
       EPX72813.1  87 SHEIVILLASDGKSSG-GKIPH-MFEQCIENRVHYAQAHNYVFEYVNVSQMDL---PPVWAKMPAILQTMNKHPQAKWIWWLDQDALILNTSLS 175
                      79************98.66666.8**********************9999998...************************************** PP

  Glyco_transf_34  96 leehvlkperLeelllkntpv......vplrryketnlvedgedvlviisqdwnglnagsflirnsewsklllDlwadpllrekkkavtesdeq 183
                      l+e++l+p+rL+ +llk+tp+      +  r++++ ++ e  +   ++isqd++glnagsf++r+s +++l+lDlw d+ +r++ +a   ++eq
       EPX72813.1 176 LQEYILSPQRLQDVLLKDTPLrspfskDFTRKTPKEYSLELVNTLGLLISQDFEGLNAGSFFVRRSPMMALFLDLWHDKAFRDNRVA---DHEQ 266
                      **********************99999999999******************************************************...**** PP

  Glyco_transf_34 184 saleyllekhpevlskvglveqkvinsydegekelgykegdlvvhfagCkvankca 239
                      ++l+y++++hpe+++ +g+++q++insy+ g +e+g+k g+lv+h+agC+v+n+c+
       EPX72813.1 267 ALLGYFIRYHPEIAAIIGVLPQTMINSYPVGWEEMGWKPGHLVIHLAGCWVENRCE 322
                      ******************************************************95 PP

>> Nucleotid_trans  Nucleotide-diphospho-sugar transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   4.1e-06     0.024     112     175 ..     217     294 ..     107     316 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 4.1e-06
  Nucleotid_trans 112 i..............NsGfffvrateatkallkkwaeelasesglw..DqdvfnlllregaakesglkvrvLdtalfvng 175
                      +              N G ffvr ++    +l+ w+++  ++  +   +q+ + ++ r+ + +e  + ++vL+++ +++ 
       EPX72813.1 217 VntlgllisqdfeglNAGSFFVRRSPMMALFLDLWHDKAFRDNRVAdhEQALLGYFIRY-H-PEIAAIIGVLPQTMINSY 294
                      155555566666666***********************9999555445***********.4.459*********999443 PP

>> DevR  CRISPR-associated negative auto-regulator DevR/Csa2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   4.4e-05      0.26     143     200 ..      25      75 ..       7     123 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 4.4e-05
                 -----------------------------HHHHHSSEEEEEEEEEGGGTTS-TTS--E CS
        DevR 143 vdaqfharydllenrarkkgeeeekqnifqvEehsalYalsfvlDldriGkpevkksk 200
                 + + f +r+ +       + + ++ qn f++++++++  +++ lD d iG++++ ++ 
  EPX72813.1  25 YFSIFSNRFTT-------SDGLNQLQNYFSQPSSTSYKDYVVPLDEDLIGESKTYHKA 75 
                 45555566664.......5558999**************************9993222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (333 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       859  (0.0479112); expected 358.6 (0.02)
Passed bias filter:                      687  (0.0383178); expected 358.6 (0.02)
Passed Vit filter:                        71  (0.00396006); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 2340.80
//
Query:       EPX72814.1  [L=383]
Description: ran GAP Rna1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.8e-14   50.9   0.6        1.7    8.9   0.0    7.6  8  LRR_6     Leucine Rich repeat
      0.001   19.3   4.0        9.2    7.3   0.0    5.4  5  LRR_1     Leucine Rich Repeat
     0.0016   18.8   9.2          7    7.2   1.2    5.2  5  LRR_4     Leucine Rich repeats (2 copies)


Domain annotation for each model (and alignments):
>> LRR_6  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.0   0.0    0.0049        30       6      21 ..      35      50 ..      33      53 .. 0.84
   2 ?    3.3   0.0     0.018   1.1e+02       2      17 ..      93     108 ..      92     110 .. 0.88
   3 !    5.3   0.0    0.0041        24       4      24 .]     123     143 ..     120     143 .. 0.90
   4 ?    3.9   0.0     0.011        66       5      23 ..     189     207 ..     185     208 .. 0.85
   5 !    8.9   0.0   0.00028       1.7       2      24 .]     215     237 ..     214     237 .. 0.88
   6 !    7.8   0.1   0.00063       3.7       4      23 ..     245     264 ..     244     265 .. 0.92
   7 !    6.9   0.0    0.0013       7.5       4      23 ..     275     294 ..     273     295 .. 0.90
   8 ?   -3.8   0.0         3   1.8e+04       8      15 ..     308     315 ..     308     316 .. 0.80

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.0049
       LRR_6  6 teLdLsgNdIgDeGae 21
                +e  LsgN Ig e a+
  EPX72814.1 35 KEIVLSGNTIGPEAAK 50
                7788********9886 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.018
       LRR_6   2 nthLteLdLsgNdIgD 17 
                 ++++ ++ Ls+N +g 
  EPX72814.1  93 CPKVNTVRLSDNAFGP 108
                 89999*******9986 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.0041
       LRR_6   4 hLteLdLsgNdIgDeGaeaLa 24 
                  L++L L  N++g e ++++a
  EPX72814.1 123 PLEHLYLHNNGLGPEAGSKIA 143
                 599***************998 PP

  == domain 4  score: 3.9 bits;  conditional E-value: 0.011
       LRR_6   5 LteLdLsgNdIgDeGaeaL 23 
                 L ++ +  N+I  eG+e L
  EPX72814.1 189 LHTVKMVQNGIRPEGIEQL 207
                 77888889********988 PP

  == domain 5  score: 8.9 bits;  conditional E-value: 0.00028
       LRR_6   2 nthLteLdLsgNdIgDeGaeaLa 24 
                 ++ L+ LdL++N ++ +G +aLa
  EPX72814.1 215 CSELRILDLQDNTFTHQGSSALA 237
                 777************99988887 PP

  == domain 6  score: 7.8 bits;  conditional E-value: 0.00063
       LRR_6   4 hLteLdLsgNdIgDeGaeaL 23 
                  L+eL L+++ +++ Ga+a+
  EPX72814.1 245 QLRELGLNDCLLSNHGAIAI 264
                 59*****************9 PP

  == domain 7  score: 6.9 bits;  conditional E-value: 0.0013
       LRR_6   4 hLteLdLsgNdIgDeGaeaL 23 
                 +L++L L++N+I  + + aL
  EPX72814.1 275 SLQTLRLQYNEIEVDSVRAL 294
                 79**********99988887 PP

  == domain 8  score: -3.8 bits;  conditional E-value: 3
       LRR_6   8 LdLsgNdI 15 
                 L+L+gN +
  EPX72814.1 308 LELNGNRF 315
                 78999976 PP

>> LRR_1  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0    0.0015       9.2       2      23 .]     124     149 ..     123     149 .. 0.86
   2 ?    4.1   0.1     0.016        97       2      19 ..     218     235 ..     217     240 .. 0.84
   3 ?    0.7   0.2      0.22   1.3e+03       1      13 [.     245     257 ..     245     270 .. 0.80
   4 ?    3.0   0.0     0.039   2.3e+02       1      21 [.     275     295 ..     275     297 .. 0.84
   5 ?   -2.0   0.0       1.7   9.9e+03       5      12 ..     308     315 ..     307     328 .. 0.77

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0015
       LRR_1   2 LrhLdLsnnpl....lglppnsfqnL 23 
                 L+hL+L nn l    ++++++++q L
  EPX72814.1 124 LEHLYLHNNGLgpeaGSKIARALQAL 149
                 9*********9888888888888865 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.016
       LRR_1   2 LrhLdLsnnpllglppns 19 
                 Lr LdL +n +++ ++++
  EPX72814.1 218 LRILDLQDNTFTHQGSSA 235
                 9********998877766 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.22
       LRR_1   1 nLrhLdLsnnpll 13 
                 +Lr+L L+++ l+
  EPX72814.1 245 QLRELGLNDCLLS 257
                 5999*9*999884 PP

  == domain 4  score: 3.0 bits;  conditional E-value: 0.039
       LRR_1   1 nLrhLdLsnnpllglppnsfq 21 
                 +L++L L +n ++  + ++++
  EPX72814.1 275 SLQTLRLQYNEIEVDSVRALK 295
                 69*********9888888776 PP

  == domain 5  score: -2.0 bits;  conditional E-value: 1.7
       LRR_1   5 LdLsnnpl 12 
                 L L++n++
  EPX72814.1 308 LELNGNRF 315
                 88999987 PP

>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.99   5.9e+03       4      13 ..      35      44 ..      32      46 .. 0.54
   2 ?   -0.6   0.0      0.33     2e+03      19      33 ..      90     104 ..      79     123 .. 0.81
   3 !    5.1   0.1    0.0054        32       3      13 ..     124     134 ..     122     140 .. 0.79
   4 !    7.2   1.2    0.0012         7       2      36 ..     217     256 ..     216     270 .. 0.76
   5 !    5.9   0.0     0.003        18       2      33 ..     275     313 ..     274     327 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.99
                -EEE--SS-- CS
       LRR_4  4 evLdLsnNql 13
                +++ Ls+N +
  EPX72814.1 35 KEIVLSGNTI 44
                3445555544 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.33
                 HHH-TT--EEE-.-S CS
       LRR_4  19 leklpnLkeLdLsgN 33 
                 l ++p+  ++ Ls+N
  EPX72814.1  90 LLQCPKVNTVRLSDN 104
                 335999999999888 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.0054
                 --EEE--SS-- CS
       LRR_4   3 LevLdLsnNql 13 
                 Le+L+L+nN l
  EPX72814.1 124 LEHLYLHNNGL 134
                 77888888876 PP

  == domain 4  score: 7.2 bits;  conditional E-value: 0.0012
                 S--EEE--SS---E-S-......HHH-TT--EEE-.-S--- CS
       LRR_4   2 nLevLdLsnNqltdipl......leklpnLkeLdLsgNnli 36 
                  L++LdL++N  t  ++      l+k p+L+eL L+++ l+
  EPX72814.1 217 ELRILDLQDNTFTHQGSsalalsLSKWPQLRELGLNDC-LL 256
                 69*********994444575533337999****99777.44 PP

  == domain 5  score: 5.9 bits;  conditional E-value: 0.003
                 S--EEE--SS---E-S-...HH.....H-TT--EEE-.-S CS
       LRR_4   2 nLevLdLsnNqltdipl...le.....klpnLkeLdLsgN 33 
                 +L++L L+ N +  +++   l+     k+p+   L L+gN
  EPX72814.1 275 SLQTLRLQYNEIE-VDSvraLKsvieeKIPDIYFLELNGN 313
                 79******99988.55544433555667888888888888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (383 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1512  (0.0843326); expected 358.6 (0.02)
Passed bias filter:                      824  (0.0459591); expected 358.6 (0.02)
Passed Vit filter:                       126  (0.00702772); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.63u 0.30s 00:00:00.93 Elapsed: 00:00:00.43
# Mc/sec: 2705.87
//
Query:       EPX72815.1  [L=238]
Description: metallochaperone Ccs1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       632  (0.0352502); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1854.24
//
Query:       EPX72816.1  [L=184]
Description: Rer1 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-73  245.7   5.5    2.4e-73  245.5   5.5    1.0  1  Rer1      Rer1 family


Domain annotation for each model (and alignments):
>> Rer1  Rer1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  245.5   5.5   1.4e-77   2.4e-73       4     170 ..      16     181 ..      13     182 .. 0.97

  Alignments for each domain:
  == domain 1  score: 245.5 bits;  conditional E-value: 1.4e-77
        Rer1   4 kklkrkyqklldkltpytleRWiatlvllllfllriillqgfyivaYalgiylLnlllafltPkfdpsleeeaaeeeaeegaelptkkdeefrPfirrl 102
                 ++l r+yq ++d+++p+t +RW+ ++ ll lf++ri++++g+yiv+Y+lgiylLnl+l fl+Pkfdpsle+++++ee+eeg  lpt+kd+efrPfirrl
  EPX72816.1  16 SALGRQYQFWVDRTIPFTNQRWMSFAGLLSLFVIRILIVRGWYIVCYTLGIYLLNLFLLFLSPKFDPSLEQAMRDEETEEG-VLPTTKDDEFRPFIRRL 113
                 56789******************************************************************9999999999.89*************** PP

        Rer1 103 pEfkfWlsatkailialvltffevfdvpVfwpiLlvyfivlfvltmrrqikhmikykyvpfdlgKkky 170
                 pEf+fW+s+t+a+++alv+++++vfd+pVfwp+L+vy++vl ++++rrqi+hm ky+yvpfd+gK+++
  EPX72816.1 114 PEFNFWYSSTRATIMALVASMLRVFDIPVFWPVLVVYYFVLSFFCFRRQIQHMLKYRYVPFDIGKRRF 181
                 ******************************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       661  (0.0368676); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.41
# Mc/sec: 1361.99
//
Query:       EPX72817.1  [L=193]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-16   60.2   0.0    2.2e-16   59.4   0.0    1.4  1  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
     0.0017   18.3   0.1     0.0023   17.9   0.1    1.2  1  Ldh_1_C   lactate/malate dehydrogenase, alpha/beta C-terminal


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.4   0.0   2.5e-20   2.2e-16       1      70 []      32     101 ..      32     101 .. 0.98

  Alignments for each domain:
  == domain 1  score: 59.4 bits;  conditional E-value: 2.5e-20
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrelk 70 
                 lfVgnL +dvt++ L+  F ++ + ++ k+vrd+ gk++gf+fV F  ++   +A ++ ngk +g+r++k
  EPX72817.1  32 LFVGNLGNDVTDDVLRNAFLEYPSLVKTKVVRDREGKTRGFGFVSFREPDHFLRAWREKNGKYIGSRPVK 101
                 8******************************************************************985 PP

>> Ldh_1_C  lactate/malate dehydrogenase, alpha/beta C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.1   2.6e-07    0.0023      45     100 ..     117     171 ..      89     191 .. 0.80

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 2.6e-07
                 TSTTSTHHHHHHHHHHHHHHHHHHHHHHTTSSSS-HHH.HHHHHHHHHHHHTTHTEE CS
     Ldh_1_C  45 ellklsekqleeliervqnggdevvkakkGagsatlsm.AvAgakfveallrdtkei 100
                 +   l++k  + l  r+++ g+ v+k+kk ++s+  s  A+A+a+ + +    +++ 
  EPX72817.1 117 K--TLDSKVRNSLYSRTKYHGNRVIKKKKEKRSSKSSNqAAAAAELMASSAAPITQT 171
                 3..6789999************************99953777777777766666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1070  (0.0596798); expected 358.6 (0.02)
Passed bias filter:                      484  (0.0269954); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 1322.13
//
Query:       EPX72818.1  [L=202]
Description: ThiJ domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      1e-39  136.0   0.0    1.2e-39  135.7   0.0    1.1  1  DJ-1_PfpI  DJ-1/PfpI family
    0.00019   21.2   0.0    0.00043   20.0   0.0    1.7  1  ThiJ_like  ThiJ/PfpI family-like
  ------ inclusion threshold ------
       0.17   11.1   0.0       0.25   10.5   0.0    1.2  1  CofC       Guanylyl transferase CofC like


Domain annotation for each model (and alignments):
>> DJ-1_PfpI  DJ-1/PfpI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.7   0.0   2.1e-43   1.2e-39       2     165 .]       3     174 ..       2     174 .. 0.94

  Alignments for each domain:
  == domain 1  score: 135.7 bits;  conditional E-value: 2.1e-43
                 EEEEEEETTBEHHHHHHHHHHHHHTTEEEEEEESS...TSEEEETTSEEEE-SEEGG.....GCTCCG-SEEEE--BHHHHHHHHTSHHHHHHHHHHH. CS
   DJ-1_PfpI   2 kvlvlladgvedvElivpvdvlkragikvdvvsvd...keevkgsrGlkvtvdasld.....dvkaaeyDalvlpGGragperlrenekvvelvkefa. 91 
                  v++++adg +++E+++p+ v+ ra i +d+v+v+   ++ v++srG+++++ +sl+     +  a+ yD++++pGG +g+++l+++e v ++v +   
  EPX72818.1   3 NVCLFVADGNDEIEFSAPWGVFTRAQIPIDSVYVGenpEKLVTMSRGVQLYAKRSLKefksvEEFASHYDVVIVPGGVKGANTLSTDEFVKKVVSSYWk 101
                 69*********************************999999****************55544323568***************************9996 PP

                 HTT-EEEEETTTHHHHHHTTTTTTSEE--SGGGHHHHHHTTSEE-SSSEEEETTEEEESSGGGHHHHHHHHHHH CS
   DJ-1_PfpI  92 ekgklvaaICagpqlLaaagvlkgrrvTsypavkdklekagakyvdkrvvvdgnlvTsrgpgaaiefalellee 165
                 ++gk++++ICag +l a++  l+   +T++p+v+++le+ag +y+ ++vvv++nl+Ts gpg+a+ +al+lle+
  EPX72818.1 102 KAGKVIGMICAG-TLTAKTTGLSATEITGHPSVRKDLEEAGFRYIPQPVVVENNLITSMGPGTALLWALKLLEQ 174
                 789*********.999********************************************************96 PP

>> ThiJ_like  ThiJ/PfpI family-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   7.3e-08   0.00043      83     139 ..      69     118 ..      12     134 .. 0.81

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 7.3e-08
   ThiJ_like  83 eeydlvllpGGsdkavrelleserlhsllveylklvkrekepskvlgaicqgvlala 139
                  +yd+v +pGG     + l ++e ++++++ y+   k++    kv+g ic g+l+ +
  EPX72818.1  69 SHYDVVIVPGGVKG-ANTLSTDEFVKKVVSSYW---KKA---GKVIGMICAGTLTAK 118
                 579********865.56999*************...555...6*********99865 PP

>> CofC  Guanylyl transferase CofC like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   4.2e-05      0.25      83     132 ..      35      87 ..      28     101 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 4.2e-05
        CofC  83 feeieekeviiipsdiPlikkedvkdll...elekradvviaPargGGtnlll 132
                 ++  + ++++ +   + l  k+ +k++    e ++++dvvi P+   G+n+l 
  EPX72818.1  35 YVGENPEKLVTMSRGVQLYAKRSLKEFKsveEFASHYDVVIVPGGVKGANTLS 87 
                 554444555555567888888888776522267899**************995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       579  (0.032294); expected 358.6 (0.02)
Passed bias filter:                      516  (0.0287802); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1494.35
//
Query:       EPX72819.1  [L=363]
Description: membrane transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-27   97.2  22.7    1.3e-27   97.0  22.7    1.0  1  TPT       Triose-phosphate Transporter family
    1.5e-10   41.4  33.1    1.5e-05   25.2   8.0    2.5  2  EamA      EamA-like transporter family
    9.2e-08   31.6  23.9    1.7e-07   30.7  23.2    1.7  2  UAA       UAA transporter family
    8.9e-07   28.4  25.4    1.3e-06   27.9  25.4    1.3  1  PUNUT     Purine nucleobase transmembrane transport
  ------ inclusion threshold ------
       0.13   11.7   0.0       0.18   11.2   0.0    1.1  1  SNAP      Soluble NSF attachment protein, SNAP


Domain annotation for each model (and alignments):
>> TPT  Triose-phosphate Transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.0  22.7   3.5e-31   1.3e-27       2     290 .]      41     338 ..      40     338 .. 0.84

  Alignments for each domain:
  == domain 1  score: 97.0 bits;  conditional E-value: 3.5e-31
         TPT   2 klgllfllWYllnvvfnilnKkilnvf....pyPltvsavqllvgsvlilvlwal..glkkrpkisse...flkailplalvktlghvlavvslskvaV 91 
                 ++gll+l WY+ +++  ++nK +++      ++Pl++s++++l+   l+ +++ +  +++ +++ +++   ++    + alv  +   l+++sl++++ 
  EPX72819.1  41 TVGLLVLSWYASSLLLSMMNKWVFSKDkldfQFPLILSSIHMLIQFSLSKLTLLAlpQYQPKQQTKTSwkeYFFRAGVCALVTSMDIGLGNISLETITL 139
                 6899********************97434449**********99876665554443666555554444114444555555666666669********** PP

         TPT  92 SfthtvKasePiFtvilsrlllgeklsllvylsLlpivgGvalasvtElsFnligfisAlisnltfslrnifsKkllkk.lkdldalnlfaiitilsll 189
                 Sf  + ++s  +F  ++s l+  e++   +++   +i gGv+l  +tE +F ++gf+  ++s +++ lr  +  kll +     +  + ++ +t l + 
  EPX72819.1 140 SFYTMCRSSILVFVFVFSVLFRIERFDWILLCITFIITGGVILMVATETEFVFSGFLFVMASSIMSGLRWALTQKLLLDhPMTSNPFTSLSALTPLNFC 238
                 ********************9999999877777788889***************************************942225667888999999999 PP

         TPT 190 lllPvallvegvlktpsllkstkvslkevllllllsgvlfhlynqvaymvLervspvthsvantvKrvvvIvlsvlvfknpvsllnaiGtavaivGvfl 288
                 +l+ + l++eg +++++    + ++   + + l++ g l +l     + +++++s vt sv   +K ++ Iv+s l++++ + ++n+iG +++++G+ +
  EPX72819.1 239 ILFIAGLILEGPKEFITSGIWK-QQGPFMSIVLIVPGTLAFLMIASEFGLIKKTSVVTLSVCGILKEIITIVVSTLFYHDILLPINVIGLVITLIGIAV 336
                 9999*******55555544433.235778888999**************************************************************** PP

         TPT 289 Ys 290
                 Y+
  EPX72819.1 337 YN 338
                 *8 PP

>> EamA  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   8.0   4.3e-09   1.5e-05      18     136 ..      62     184 ..      56     185 .. 0.82
   2 !   23.9  14.8     1e-08   3.7e-05       2     136 ..     193     338 ..     192     339 .. 0.74

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 4.3e-09
        EamA  18 fvlskillrkvspltltfvrfliagill..liiallkegkl..aklslkdwllllllgllgtvlafllffyalkktsasnaslitslePvftlilsvll 112
                 +v+sk  l +  pl l+ + +li + l    ++al++ +++   k s+k++++ + +++l t +  +l +++l++++ s+ +++ s + vf+ ++svl+
  EPX72819.1  62 WVFSKDKLDFQFPLILSSIHMLIQFSLSklTLLALPQYQPKqqTKTSWKEYFFRAGVCALVTSMDIGLGNISLETITLSFYTMCRSSILVFVFVFSVLF 160
                 667777777777777777777755544442444444444445678999999999999999999999********************************* PP

        EamA 113 lgekltlkqllgivlillGvllil 136
                   e++ ++ l+ +++i  Gv+l++
  EPX72819.1 161 RIERFDWILLCITFIITGGVILMV 184
                 *********************997 PP

  == domain 2  score: 23.9 bits;  conditional E-value: 1e-08
        EamA   2 lgillallaalfwaiyfvlskillrkv....spltltfvrfliagillliiallkegkl.....aklslkdwllllllgllgtvlaf...llffyalkk 88 
                 +g l+++++++++++ + l+++ll ++    +p+t +   + + + +l+i  l+ eg++       ++++   ++ ++ +++++laf      f ++kk
  EPX72819.1 193 SGFLFVMASSIMSGLRWALTQKLLLDHpmtsNPFTSLSALTPLNFCILFIAGLILEGPKefitsGIWKQQ-GPFMSIVLIVPGTLAFlmiASEFGLIKK 290
                 6899****************99977774555555444433336666666777777777666774334444.4555555555555555111556889*** PP

        EamA  89 tsasnaslitslePvftlilsvlllgekltlkqllgivlillGvllil 136
                 ts+ + s++  l  ++t++ s l+++  l  + ++g+v+ l+G+++ +
  EPX72819.1 291 TSVVTLSVCGILKEIITIVVSTLFYHDILLPINVIGLVITLIGIAVYN 338
                 ********************************************9876 PP

>> UAA  UAA transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       0.2   7.1e+02     110     138 ..      24      52 ..      22      65 .. 0.81
   2 !   30.7  23.2   4.8e-11   1.7e-07      36     300 ..      82     339 ..      48     341 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.2
         UAA 110 ilgkrYsllqylsvllltlGviiftllsa 138
                 +++k++s++   + l +t+G+ + +++ +
  EPX72819.1  24 LCQKTWSFRHPWASLAITVGLLVLSWYAS 52 
                 67899999999999999999999999765 PP

  == domain 2  score: 30.7 bits;  conditional E-value: 4.8e-11
         UAA  36 tfvqflf..valegllesidilkkrkiPlktYvilvalffits....vlnnealkydisvPvhiifrssklipvmilGililgkrYsllqylsvllltl 128
                  ++qf +  ++l +l++ +  +++ k+++k+Y++ + +  +++    +l n +l+  i + + ++ rss l+ v + ++l+   r+ ++    ++++t 
  EPX72819.1  82 MLIQFSLskLTLLALPQYQ-PKQQTKTSWKEYFFRAGVCALVTsmdiGLGNISLET-ITLSFYTMCRSSILVFVFVFSVLFRIERFDWILLCITFIITG 178
                 4555443114445554333.38999*******986543333321223789******.****************************************** PP

         UAA 129 GviiftllsakdkkedskeslnkfllGiallvlallldavlglvqeklykkygkhskealfyshllslplfl.llqgellsavkflsesedvallslps 226
                 Gvi++         +    ++++ + G++ ++ + +++++  ++++kl   ++++s+     s l +l + + +++g +l+  k + +s   +  + p 
  EPX72819.1 179 GVILMVA-------T----ETEFVFSGFLFVMASSIMSGLRWALTQKLLLDHPMTSNPFTSLSALTPLNFCIlFIAGLILEGPKEFITSGIWK-QQGPF 265
                 ***9998.......2....367899*********************************9999*****99988689999999999999998888.699** PP

         UAA 227 klfylllnvltqyvcikgVlilisefgaltvtlvltlRKfvslllSillFknpltlqhlvgtllVflglllysy 300
                 + ++l++  +++++ i + + li++++  t+++   l  ++++++S l+++  l    ++g ++ ++g+++y+y
  EPX72819.1 266 MSIVLIVPGTLAFLMIASEFGLIKKTSVVTLSVCGILKEIITIVVSTLFYHDILLPINVIGLVITLIGIAVYNY 339
                 ***********************************************************************998 PP

>> PUNUT  Purine nucleobase transmembrane transport
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9  25.4   3.5e-10   1.3e-06      59     317 ..      91     342 ..      36     347 .. 0.80

  Alignments for each domain:
  == domain 1  score: 27.9 bits;  conditional E-value: 3.5e-10
       PUNUT  59 rkq......kettssslslkklvllyivlGllvavdnllyslgllylpvstfslilatqLaFtaifsalinkqkftrfiinsvvlltisaallalssss 151
                  +       + ++++++s+k+ +  + v  l++++d  l  + l  + +s +++  ++ L+F  +fs l+   +f  +i++++ +++ + ++l++ +  
  EPX72819.1  91 LTLlalpqyQPKQQTKTSWKEYFFRAGVCALVTSMDIGLGNISLETITLSFYTMCRSSILVFVFVFSVLFRIERFD-WILLCITFIITGGVILMVAT-- 186
                 111333334567789999*********************************************************6.9******9999999998544.. PP

       PUNUT 152 dkpaeeskkkyvigfiltlaasllfaLlLslvellfekvlkketfslvlemqivlslvatvvcvvGllisGefkelkkeaeeFkkGkslYvlvlvgsav 250
                       +++  + gf+ ++a+s++ +L  +l+++l       +t +    + +++ l   ++ + Gl+ +G  + +++ + + ++G  + ++ +v  ++
  EPX72819.1 187 ------ETEFVFSGFLFVMASSIMSGLRWALTQKLLLDHP--MTSNPFTSLSALTPLNFCILFIAGLILEGPKEFITSGIWK-QQGPFMSIVLIVPGTL 276
                 ......3467899********************9876665..34455556677777777888999******99999998877.7899999999999999 PP

       PUNUT 251 swQvlavGavgLvflvSslfsnvistvllpvvsvlavilfrdkfsavkgvalllailgfasYvYgey 317
                 ++ +++    gL+  +S ++  v+ ++   ++ v+  ++++d +  + ++ l+++++g+a Y Y  +
  EPX72819.1 277 AF-LMIASEFGLIKKTSVVTLSVCGILKEIITIVVSTLFYHDILLPINVIGLVITLIGIAVYNYYRI 342
                 98.788999******************************************************9765 PP

>> SNAP  Soluble NSF attachment protein, SNAP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   5.1e-05      0.18     189     210 ..     103     124 ..      98     143 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 5.1e-05
                 TTTGGGHHHHHHHHHHHHHHTT CS
        SNAP 189 nllkysvkeyflkaglcrLaag 210
                 + +k+s keyf++ag+c+L+++
  EPX72819.1 103 QQTKTSWKEYFFRAGVCALVTS 124
                 568****************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (363 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       846  (0.0471861); expected 358.6 (0.02)
Passed bias filter:                      291  (0.0162307); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 2652.18
//
Query:       EPX72820.1  [L=113]
Description: 60S ribosomal protein L31 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.8e-39  133.2   1.2    4.1e-39  132.7   1.2    1.2  1  Ribosomal_L31e  Ribosomal protein L31e
  ------ inclusion threshold ------
       0.04   14.0   0.1      0.047   13.7   0.1    1.2  1  TrbC_Ftype      Type-F conjugative transfer system pilin asse


Domain annotation for each model (and alignments):
>> Ribosomal_L31e  Ribosomal protein L31e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.7   1.2   4.6e-43   4.1e-39       1      80 [.      11      90 ..      11      91 .. 0.97

  Alignments for each domain:
  == domain 1  score: 132.7 bits;  conditional E-value: 4.6e-43
  Ribosomal_L31e  1 evvtreytInihkrihgvgfkkraprAlkeikkfamkemgtpdvridtrLnkavwakgirnvpyrirvrlsrkrnedEds 80
                    +vvtr+ytI++hkr++gv+fkkraprA+kei +fa+k+m+t+dvr+d++Lnk vw++gi++vp+r+r rlsrkr++++d 
      EPX72820.1 11 QVVTRDYTIHMHKRLYGVSFKKRAPRAIKEIVAFAQKHMQTKDVRVDPSLNKEVWKQGIKSVPRRLRLRLSRKRSDEDDK 90
                    59************************************************************************998885 PP

>> TrbC_Ftype  Type-F conjugative transfer system pilin assembly protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   5.2e-06     0.047      28      90 ..      25      90 ..       5     104 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 5.2e-06
  TrbC_Ftype 28 lrGfpegkslketvkalaklleeemekasvqidPllFrqf...kitaVPalvlaeedkaseeddec 90
                l G+  +k+  +++k++ +  +++m++++v++dP l ++    +i++VP     + +++  ++d++
  EPX72820.1 25 LYGVSFKKRAPRAIKEIVAFAQKHMQTKDVRVDPSLNKEVwkqGIKSVPRRLRLRLSRKRSDEDDK 90
                67776666888999999999999*************99754448*****99888877777664444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       587  (0.0327403); expected 358.6 (0.02)
Passed bias filter:                      326  (0.0181828); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.27s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 815.72
//
Query:       EPX72821.1  [L=340]
Description: type I protein arginine N-methyltransferase Rmt1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.1e-14   54.0   0.1    2.3e-13   50.6   0.0    2.4  2  Methyltransf_25  Methyltransferase domain
    8.7e-13   48.7   0.0    1.6e-11   44.7   0.0    2.4  2  Methyltransf_11  Methyltransferase domain
    1.2e-11   44.6   0.0    1.7e-11   44.1   0.0    1.2  1  PrmA             Ribosomal protein L11 methyltransferase (Prm
    1.9e-11   44.0   0.0    3.4e-11   43.2   0.0    1.4  1  Methyltransf_31  Methyltransferase domain
    3.1e-09   36.9   0.0    2.8e-08   33.8   0.0    2.1  2  Methyltransf_23  Methyltransferase domain
    3.2e-06   26.3   0.2    4.6e-06   25.8   0.2    1.2  1  Methyltransf_9   Protein of unknown function (DUF1698)
    6.2e-06   26.9   0.0    1.8e-05   25.4   0.0    1.8  2  Methyltransf_12  Methyltransferase domain
    8.4e-06   25.4   0.0    1.5e-05   24.6   0.0    1.3  1  MTS              Methyltransferase small domain
    0.00011   21.6   0.0    0.00021   20.7   0.0    1.4  1  Methyltransf_2   O-methyltransferase domain
    0.00014   21.8   0.1    0.00024   21.1   0.1    1.3  1  Methyltransf_18  Methyltransferase domain
    0.00016   21.0   0.0    0.00027   20.3   0.0    1.4  1  CMAS             Mycolic acid cyclopropane synthetase
     0.0015   18.3   0.1     0.0022   17.7   0.1    1.3  1  Methyltransf_16  Lysine methyltransferase
     0.0029   17.6   0.0     0.0047   16.9   0.0    1.3  1  Methyltransf_32  Methyltransferase domain
     0.0031   17.0   1.0     0.0064   15.9   0.1    2.0  2  TehB             Tellurite resistance protein TehB
     0.0051   17.8   0.0      0.015   16.4   0.0    1.8  1  Methyltransf_24  Methyltransferase domain
  ------ inclusion threshold ------
      0.017   15.0   0.2      0.039   13.8   0.2    1.6  1  PRMT5            PRMT5 arginine-N-methyltransferase
      0.035   13.4   0.0      0.055   12.8   0.0    1.3  1  Ubie_methyltran  ubiE/COQ5 methyltransferase family
       0.11   12.3   0.0       0.17   11.6   0.0    1.2  1  PCMT             Protein-L-isoaspartate(D-aspartate) O-methyl


Domain annotation for each model (and alignments):
>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.6   0.0   2.3e-16   2.3e-13       1      97 []      58     155 ..      58     155 .. 0.92
   2 ?    0.5   0.0      0.99   9.8e+02      23      72 ..     184     244 ..     173     263 .. 0.53

  Alignments for each domain:
  == domain 1  score: 50.6 bits;  conditional E-value: 2.3e-16
                      EEEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTT..TEEEEESBCCGBSSSTTTEEEEEEEST.GGGSSHHHHHHHHHHHHH CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeegl..nvefvqgdaedlpfedgsfDlvvssga.lhhlsdedlekalkeiar 91 
                      vLd+GcGtG l++ +a++ g+++v+g+D+se  + +a+e ++ ++l  ++++++g++ed++++ +++D++vs  + + +l ++ l+++l    r
       EPX72821.1  58 VLDVGCGTGILSMFCARA-GAKHVYGIDMSE-IIHKAKEIVHVNKLsdRITLMKGKMEDIQLPVEKVDIIVSEWMgYFLLYESMLDTVLLARDR 149
                      9*****************.69********96.7788999998888899************************6666777888999********* PP

                      HEEEEE CS
  Methyltransf_25  92 vLkpgG 97 
                       L pgG
       EPX72821.1 150 YLAPGG 155
                      *****9 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.99
                      EEEEEESSHHHHHHHHHHHHHTTT........TEEEEESBC.....CGBSSSTTTEEEEEEES CS
  Methyltransf_25  23 kvtgvDiseemleaareraeeegl........nvefvqgda.....edlpfedgsfDlvvssg 72 
                      +v+g+D+s+   +  +e + ++ +        ++e+++ d+     e+l f + sf +  +++
       EPX72821.1 184 DVYGFDFSPIKRDVWKEPLVDN-VdriavntnSCEILNIDLttvkkEELAFSS-SFEIAAARN 244
                      5777777777666666544431.111111222444444444111113333433.555555544 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.7   0.0   1.6e-14   1.6e-11       1      94 [.      59     157 ..      59     158 .. 0.89
   2 ?    1.3   0.0      0.57   5.6e+02      19      43 ..     183     207 ..     170     253 .. 0.74

  Alignments for each domain:
  == domain 1  score: 44.7 bits;  conditional E-value: 1.6e-14
                      EEET-TTSHHHHHHHHTT.SEEEEEES-HHHHHHHHHHCCHHT-..EEEETTEECCCTSS-TT-EEEEEEES-CCC-...CCHHHHHHHHHHHE CS
  Methyltransf_11   1 LdvGcGtGrlaealakrg.arvvgvDlskemlklakekaseegl..kvefvvadaeklpfednsfDlvvssevlhhv...edpekalkeiaRvL 88 
                      LdvGcGtG+l+  +a++g ++v+g+D+s+  +  ake ++ ++l  +++++++ +e+++++ +++D++vs ++  ++     ++ +l    R L
       EPX72821.1  59 LDVGCGTGILSMFCARAGaKHVYGIDMSEIIH-KAKEIVHVNKLsdRITLMKGKMEDIQLPVEKVDIIVSEWMGYFLlyeSMLDTVLLARDRYL 151
                      8*************************888776.67666666666899*************************7777776689************ PP

                      EEEEEE CS
  Methyltransf_11  89 kpgGll 94 
                       pgGl+
       EPX72821.1 152 APGGLM 157
                      ****97 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.57
                      SEEEEEES-HHHHHHHHHHCCHHT- CS
  Methyltransf_11  19 arvvgvDlskemlklakekaseegl 43 
                       +v+g+D+s+  ++++ke  +++  
       EPX72821.1 183 DDVYGFDFSPIKRDVWKEPLVDNVD 207
                      6899*****9999999887777654 PP

>> PrmA  Ribosomal protein L11 methyltransferase (PrmA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.1   0.0   1.7e-14   1.7e-11     162     233 ..      55     128 ..      44     175 .. 0.85

  Alignments for each domain:
  == domain 1  score: 44.1 bits;  conditional E-value: 1.7e-14
        PrmA 162 geevlDvGtGSGiLaiaaakLgakkvvavDiDevAvkvakeNaelNkveakleva..lseellk..eekadvivaN 233
                 ++ vlDvG+G+GiL++  a+ gak+v+++D+ e+ ++ ake +++Nk++++++++    e++ +   ek+d+iv+ 
  EPX72821.1  55 DKVVLDVGCGTGILSMFCARAGAKHVYGIDMSEI-IHKAKEIVHVNKLSDRITLMkgKMEDI-QlpVEKVDIIVSE 128
                 6789****************************98.899**************8742222333.235699*****86 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.2   0.0   3.4e-14   3.4e-11       4     118 ..      55     168 ..      52     200 .. 0.85

  Alignments for each domain:
  == domain 1  score: 43.2 bits;  conditional E-value: 3.4e-14
  Methyltransf_31   4 glrvlDlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaqklgld.nveFeqgdieeleklledekfDlilsn...evlnaladpdki 93 
                      +++vlD+GCGtG l+   a ++g  ++v+GiD+se  i +A+e+   ++l+ ++++ +g +e+++  l  ek+D+i+s     +l + + +d +
       EPX72821.1  55 DKVVLDVGCGTGILSMFCA-RAG-AKHVYGIDMSE-IIHKAKEIVHVNKLSdRITLMKGKMEDIQ--LPVEKVDIIVSEwmgYFLLYESMLDTV 143
                      789****************.776.489******95.8******999999888***********99..77789******9887777999999999 PP

  Methyltransf_31  94 leeiervlkpggilliedprllael 118
                      l    r+l pgg +  + ++l+   
       EPX72821.1 144 LLARDRYLAPGGLMFPDRAKLMIAA 168
                      9999999999999887777755444 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.8   0.0   2.8e-11   2.8e-08      10     115 ..      43     157 ..      32     162 .. 0.65
   2 ?    0.6   0.0      0.44   4.4e+02      44      62 ..     180     206 ..     165     257 .. 0.66

  Alignments for each domain:
  == domain 1  score: 33.8 bits;  conditional E-value: 2.8e-11
  Methyltransf_23  10 sdklerllpklraggrvLdiGcGtGillevlrengf.svtgvDlspeaveiae..........kakkaqkdqfdeq.......eaaepqgkfdl 85 
                      +d++++ +  l++++ vLd+GcGtGil+  +++ g+ +v+g+D+s++ +++a+           +                  +++ p +k d+
       EPX72821.1  43 RDAIMQNP-HLFRDKVVLDVGCGTGILSMFCARAGAkHVYGIDMSEI-IHKAKeivhvnklsdRI----------TlmkgkmeDIQLPVEKVDI 124
                      56666665.49***********************9989******987.66666355555444322..........1222222255557778888 PP

  Methyltransf_23  86 Ivlrevlehvpd...ppellrqiatllkpgGyl 115
                      Iv+  + + + +   +  +l    ++l+pgG++
       EPX72821.1 125 IVSEWMGYFLLYesmLDTVLLARDRYLAPGGLM 157
                      887544333332122334555555566666665 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.44
  Methyltransf_23  44 gf..svtgvDlspeaveiae......k 62 
                      gf  +v+g+D sp++ +  +       
       EPX72821.1 180 GFwdDVYGFDFSPIKRDVWKeplvdnV 206
                      666799999999986655445555441 PP

>> Methyltransf_9  Protein of unknown function (DUF1698)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   0.2   4.6e-09   4.6e-06     109     216 ..      50     157 ..      25     166 .. 0.86

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 4.6e-09
                     GGS.--TT-EEEEET-TTSHHHHHHHHCT-SEEEEE---HHHHHHHHHHHCCTTTTSSEEEE---GGGS-T.---EEEEEE..ES-GGG-S-HHH CS
  Methyltransf_9 109 phlsdlkgrtildvGcgnGyhlwrmvgegaklvvGidPselfliqfeavrkllgedqrahllplgieqlpe.leafdtvfs..mGvlyhrrsPld 200
                     phl  ++++++ldvGcg+G   +  + +gak v Gid se+     e v ++     r +l+   +e+++  +e  d++ s  mG +   +s ld
      EPX72821.1  50 PHL--FRDKVVLDVGCGTGILSMFCARAGAKHVYGIDMSEIIHKAKEIV-HVNKLSDRITLMKGKMEDIQLpVEKVDIIVSewMGYFLLYESMLD 141
                     777..89*************9999999************9987766655.455567788899999****998******9987799999999**** PP

                     HHHHHHCTEEEEEEEE CS
  Methyltransf_9 201 hllqlkdqlvkgGelv 216
                     ++l  +d   + G l+
      EPX72821.1 142 TVLLARDRYLAPGGLM 157
                     *999999877766665 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.0   1.8e-08   1.8e-05       1      98 [.      59     156 ..      59     157 .. 0.79
   2 ?   -2.3   0.0       7.7   7.6e+03      47      59 ..     212     224 ..     184     252 .. 0.51

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 1.8e-08
  Methyltransf_12   1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvelealdlldldgg.ssfDlvv...asnvlhhlkdirevldnir 90 
                      L++GcGtG l++ ++++   ++++g+D s+    +ake  + ++    ++++l +   +d + + +++D++v   +  +l +   ++ vl    
       EPX72821.1  59 LDVGCGTGILSMFCARA-GAKHVYGIDMSEIIH-KAKEIVHVNKLS--DRITLMKGKMEDIQLPvEKVDIIVsewMGYFLLYESMLDTVLLARD 148
                      8**************99.999999*****9877.777776666654..466666555555555568*****98877888888788889999999 PP

  Methyltransf_12  91 klLkpgGr 98 
                      + L+pgG 
       EPX72821.1 149 RYLAPGGL 156
                      99999996 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 7.7
  Methyltransf_12  47 nnnnvelealdll 59 
                      n+n +e+ ++dl 
       EPX72821.1 212 NTNSCEILNIDLT 224
                      3333333333333 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.0   1.5e-08   1.5e-05      31     103 ..      54     127 ..      43     128 .. 0.79

  Alignments for each domain:
  == domain 1  score: 24.6 bits;  conditional E-value: 1.5e-08
                 TCSEEEEET-TTSHHHHHHHHHTTC.E..EEEEESBHHHHHHHHHHHHHTTGC.EEEEE-STTTTSTTS-EEEEEE CS
         MTS  31 lsgkvlDlGcGaGvlgaalakespeae..vtlvdvdarAlesakenleankle.vevvasdvleeveekkfdlivs 103
                 +++ vlD+GcG+G+l++ +a++  ++   +++ ++ ++A e+ + n  + ++  ++   +d+   ve  k+d+ivs
  EPX72821.1  54 RDKVVLDVGCGTGILSMFCARAGAKHVygIDMSEIIHKAKEIVHVNKLSDRITlMKGKMEDIQLPVE--KVDIIVS 127
                 46679****************9988655688888888888888888888887777777888877777..9999997 PP

>> Methyltransf_2  O-methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   2.1e-07   0.00021      47     134 ..      38     128 ..      25     135 .. 0.82

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 2.1e-07
                     HHHHHHHHHHSS-.GGG-SEEEEET-TTSHHHHHHHHH-TT-EEEEEE-HHHHHHHHHHS.-----TTEEEEES-TTTS---..--SEEEEE CS
  Methyltransf_2  47 sslvakkvleafd.leglkslvDvGGGtGalakaivsayPtikvivfDlpeVveaAkehl.sageeervefvgGdffkdslP..eaDaillk 134
                      +l  ++++ +   l + k+++DvG GtG l   +++a    +v   D++e++++Ake + + ++++r++ ++G + + +lP  + D+i+ +
      EPX72821.1  38 RTLSYRDAIMQNPhLFRDKVVLDVGCGTGILSMFCARAG-AKHVYGIDMSEIIHKAKEIVhVNKLSDRITLMKGKMEDIQLPveKVDIIVSE 128
                     55666665555444888899***********99999985.5578899***********9978899*****************7777877655 PP

>> Methyltransf_18  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.1   2.4e-07   0.00024      15      95 ..      55     134 ..      48     147 .. 0.85

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 2.4e-07
  Methyltransf_18  15 gsrvaDiGtDHgylpiylvkegkakkviasDinegplekakeniekagledkievrlsdGleklk.eee.vdtvviaGmGgel 95 
                      +++v+D+G+  g+l+++ ++   ak+v+ +D++e  ++kake ++ ++l+d+i+++ ++ +e ++ + e vd++v   mG  l
       EPX72821.1  55 DKVVLDVGCGTGILSMFCAR-AGAKHVYGIDMSE-IIHKAKEIVHVNKLSDRITLMKGK-MEDIQlPVEkVDIIVSEWMGYFL 134
                      6799************9996.5588******986.799****************99887.56666577779999998888765 PP

>> CMAS  Mycolic acid cyclopropane synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   2.7e-07   0.00027      52     133 ..      44     127 ..      32     176 .. 0.82

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 2.7e-07
                 HHHHTTTT--TT-EEEEES-TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHTS-SSS-EEEEES-GGG---...--SEEEE CS
        CMAS  52 dlileklelkpGmtlLdiGcGWGslvrraverydvkvvglTlSkeqaklakkrvdeldlerkvevklldyedlde...kvdrvvs 133
                 d i++  +l   + +Ld+GcG G l +  ++    +v g+ +S+   ++ak+ v+   l+++ ++   + ed++    kvd +vs
  EPX72821.1  44 DAIMQNPHLFRDKVVLDVGCGTGILSMFCARAGAKHVYGIDMSEI-IHKAKEIVHVNKLSDRITLMKGKMEDIQLpveKVDIIVS 127
                 56667777778889******************8889******975.5668999********************973336666666 PP

>> Methyltransf_16  Lysine methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.1   2.3e-06    0.0022      42     125 ..      50     126 ..      28     146 .. 0.80

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 2.3e-06
  Methyltransf_16  42 anelsklsvlELGsGtGlvGlavaellpeakviltDleellellkknielnknalkskvkvevLdWgeeleedllekeevDlil 125
                       + ++++ vl++G GtG+  +  a++ +  +v+  D++e+++  k+ + +nk  l+++++ ++ +  e++  +l   e+vD+i+
       EPX72821.1  50 PHLFRDKVVLDVGCGTGILSMFCARA-GAKHVYGIDMSEIIHKAKEIVHVNK--LSDRITLMKGKM-EDI--QL-PVEKVDIIV 126
                      45678899*****************9.9999*******************88..****99987664.555..23.345577776 PP

>> Methyltransf_32  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   4.7e-06    0.0047      26      71 ..      55      96 ..      40     141 .. 0.71

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 4.7e-06
  Methyltransf_32 26 altvvDvGaGkgYLsfvlalkekeyklkvvgidakeelvekaekra 71
                     ++ v+DvG+G g Ls   a        +v+gid++e    ka+++ 
       EPX72821.1 55 DKVVLDVGCGTGILSMFCAR---AGAKHVYGIDMSEIIH-KAKEIV 96
                     6789***************9...7789******986443.333333 PP

>> TehB  Tellurite resistance protein TehB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.1   6.4e-06    0.0064      25     138 ..      49     171 ..      12     181 .. 0.62
   2 ?   -2.9   0.1       3.8   3.7e+03      57      91 ..     210     243 ..     203     252 .. 0.53

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 6.4e-06
                 HCCCS-S-EEEEES-TTSHHHHHHHHTT-.EEEEEES-HHHHHHHHHHHHHTT-TT.EEEEE--GGG----.S-EEEEEEESSGGGS-.GGGHHHHHHH CS
        TehB  25 avkivkpgkvldlgcgqgrnslylsllgy.dvtawdknensiafleeikekenlkn.istalydineakld.erydfilstvvlmfle.aeripsiien 119
                   ++ +   vld+gcg g  s++ +  g  +v  +d  e  i   +ei + ++l++ i+    ++++++l  e+ d+i+s  +  fl  + ++ +++  
  EPX72821.1  49 NPHLFRDKVVLDVGCGTGILSMFCARAGAkHVYGIDMSE-IIHKAKEIVHVNKLSDrITLMKGKMEDIQLPvEKVDIIVSEWMGYFLLyESMLDTVLLA 146
                 3344455669**************988752456666543.46666666666666432555555666666643899*****9887776504556777777 PP

                 HHHTEEEEEE......EEEEEEB-- CS
        TehB 120 mqectkvggy......nlivaamst 138
                  +++  +gg        l++aa++ 
  EPX72821.1 147 RDRYLAPGGLmfpdraKLMIAAIED 171
                 7888888885222222456666655 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 3.8
                 EEES-HHHHHHHH.HHHHHTT-TTEEEEE--GGG-- CS
        TehB  57 awdknensiafle.eikekenlknistalydineak 91 
                 a++ n+  i +++  + +ke+l    +++++i +a+
  EPX72821.1 210 AVNTNSCEILNIDlTTVKKEELA--FSSSFEIAAAR 243
                 44445555555552345666666..45555665554 PP

>> Methyltransf_24  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   1.5e-05     0.015       3     100 ..      61     156 ..      59     161 .. 0.72

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 1.5e-05
  Methyltransf_24   3 iGvysGvstlwllralrrngagrlvavdhdpgaeeaaalareaglddrvrlikadseealaslaagsiDllfiDggha...aeavledleall. 92 
                      +G+  G  +++++    r+ga +++ +d  +  ++a++++  ++l+dr++l+k+++e+   +l  +++D+++         +e+ l+ + +++ 
       EPX72821.1  61 VGCGTGILSMFCA----RAGAKHVYGIDMSEIIHKAKEIVHVNKLSDRITLMKGKMEDI--QLPVEKVDIIVSEWMGYfllYESMLDTVLLARd 148
                      6766888777777....5566799*******9999**********************98..777778888876543221114555555555542 PP

  Methyltransf_24  93 prlapggv 100
                      ++lapgg+
       EPX72821.1 149 RYLAPGGL 156
                      35556665 PP

>> PRMT5  PRMT5 arginine-N-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.2   3.9e-05     0.039     109     149 ..      92     133 ..      20     147 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 3.9e-05
                 HHHHHHHHTTCCGCEEEES-CCCCCHCC.-ECEEEE---BTT CS
       PRMT5 109 LqkkvneekWeekveviksdmrelkaee.kvdllvsELLGSf 149
                  ++ v+++k +++++++k  m +++ +  kvd++vsE +G f
  EPX72821.1  92 AKEIVHVNKLSDRITLMKGKMEDIQLPVeKVDIIVSEWMGYF 133
                 344456667799*************98769**********98 PP

>> Ubie_methyltran  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   5.6e-05     0.055      35     149 ..      42     157 ..      28     175 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 5.6e-05
                      HHHHHHHH--S--TTEEEEES-TT-HHHHHHHHHHHHHHEEEEEES-HHHHHHHHHHHHHHTSSTEEEEE--TTT-TTS-T-EEEEE...EES- CS
  Ubie_methyltran  35 WkkfveklvavkrgakvlDvagGtgDlafklsdsvgekgkvvvlDinenmLkvgekklkeegkinieflqanaeeLpfeddsfDvvt...vsfG 125
                      +++ +++     r + vlDv +Gtg l++  ++ +g+k +v ++D++e + k  e    ++   +i +++++ e+++   +  D++    +++ 
       EPX72821.1  42 YRDAIMQNPHLFRDKVVLDVGCGTGILSMFCAR-AGAK-HVYGIDMSEIIHKAKEIVHVNKLSDRITLMKGKMEDIQLPVEKVDIIVsewMGYF 133
                      5677777777788899*********98876555.5554.79******98777666555566666********9998888888888753447888 PP

                      GGG-S-HHHHHHHHHHHEEEEEEE CS
  Ubie_methyltran 126 lrnvtDklkaLkeayrvlkpGGrl 149
                      l   +  +++L    r l pGG +
       EPX72821.1 134 LLYESMLDTVLLARDRYLAPGGLM 157
                      888889999999999999999976 PP

>> PCMT  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00017      0.17      71     124 ..      52     102 ..      38     115 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00017
                 --TT-EEEEES-TTSHHHHHHHHHHCTTCEEEEEESBHHHHHHHHHHHHHCTTC CS
        PCMT  71 lkkgarvLevGsGsGyltavlarlvgekgrvvsierikelveeakrnlkkldle 124
                 l + + vL+vG+G+G+l+   ar  g+k  v +i+   e++++ak+ ++ ++l+
  EPX72821.1  52 LFRDKVVLDVGCGTGILSMFCARA-GAKH-VYGIDM-SEIIHKAKEIVHVNKLS 102
                 5566789*********99888875.4554.789985.67888888887766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (340 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       354  (0.0197445); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2581.15
//
Query:       EPX72822.1  [L=1314]
Description: nucleoporin Nup157/170 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.2e-89  300.2   6.2    3.9e-89  299.4   6.2    1.3  1  Nucleoporin_N  Nup133 N terminal like
    1.8e-48  165.7   7.8    4.5e-48  164.4   7.7    1.6  1  Nucleoporin_C  Non-repetitive/WGA-negative nucleoporin C-term


Domain annotation for each model (and alignments):
>> Nucleoporin_N  Nup133 N terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  299.4   6.2   4.3e-93   3.9e-89       3     433 ..      60     513 ..      59     514 .. 0.87

  Alignments for each domain:
  == domain 1  score: 299.4 bits;  conditional E-value: 4.3e-93
                    -SCEEEEEEE--HCHHHTTS--SS-EEEEEECTTTEEEEEETTEEEEEETTSSSS...EEEEEE----S---EEEEEE---SSSS-SSSCEEEEEC CS
  Nucleoporin_N   3 tdfykvsklalPdelleelnhtesstkgglfpeigrawitvdnklflWnYnstasspstdtipydgeehtilavglLvkpkpgtfveevgllLvva 98 
                    ++fy  s++++Pd+++e++n te+ t++glf+ei+rawitvdn+lflW+Y s++      +++y++++hti++v+ Lv pk+++fve v+ lLv+a
     EPX72822.1  60 KPFYLRSVINIPDRIFEQYNRTECFTQMGLFSEIQRAWITVDNRLFLWDYLSGQ-----NFQAYEDLSHTIVSVK-LVQPKKNVFVEVVQCLLVIA 149
                    689999999********************************************9.....9***************.******************** PP

                    TTSEEEEECECCS--------EEEEEEEE--EETT.TTEEEEEEETTTC-EEEEETTS.SEEEEEEC-SSS-CEEEEEEEEE-SSSS-...--SSS CS
  Nucleoporin_N  99 ttgeivyweviysaasllstnelslfntdlsvssdgeivtqvinseptgriflagstg.rlyeltyrdssgwpslkckkicltkgglssllsilpg 193
                    tt ei +++v+ ++    +t el+ + t++++   g++v+++++s+ +grif++g+ + +lye+ y++ +gw+s kc+k++lt + +    +++p+
     EPX72822.1 150 TTQEILLLGVSIDK----TTGELTFYSTGMQIAIPGLNVNNIVSSK-DGRIFFSGNRDpNLYEFYYQSDEGWFSRKCNKVNLTGSAID---NFVPS 237
                    **************....***********************88888.999**************************************...***** PP

                    --G----GG-EEEEEEECCTCEEEEEETTSEEEEEEEETTCEE-EEEEEEEHHHHHHHH.HHSCHTTT.CGCTTT-EEEEEEES-TTTSSCEEEEE CS
  Nucleoporin_N 194 vlsgasereeivqlridssrrilytlsskgvirvydlsasngesslksdidirqilleaitesliasa.plaskslkildispvsaeessllhlva 288
                    ++s +   + + q+++d+sr++ly+l + + + +y++s  n++ +++ ++++++++++a  + l as+  l + s+k+++i+p++a es+++  va
     EPX72822.1 238 FFSYGVHGDGVKQIAVDDSRNLLYVLRESSSVTCYEIS--NSNIHRCVSYSFNSMISQA--QMLNASSiLLDPRSTKLVSIVPIPAYESQQIYCVA 329
                    **************************************..4589***************..66666666*************************** PP

                    EECSSSEEEEEEEEE............EEECTTT-EEEEEEEEE.......EEEECCCCCSSSSS......SSBECC-CC............SSET CS
  Nucleoporin_N 289 itsngvrlylllsss............ssdspsalslvsvrfpp.......krlntysskllenk......kksklllps............kiis 347
                    its+g+r+y ++ +             s ++ps l++ ++rfpp       ++ +++s ++  ++      ++ + l+++            +i++
     EPX72822.1 330 ITSTGCRFYMRGGRNatsyfetsdgsfSTNPPSTLQVTHIRFPPsfqnndyQPKRQFSGSSFFPQgqsvpqQQAQDLSAQtkrefmdcsslsTIFT 425
                    ********99999999999999999*******************8888888444444444444444444453333333333444444436655555 PP

                    TCEEEEEEES-..-SEEEEEEEEE-TTTTSSS.......ESEEEECCS--SE-EEEEE--T--T--CCCCCCSSTTCTTTTS---.EEEETTTEEE CS
  Nucleoporin_N 348 pgiflfvvfdk..ssavvlvslpdtgilkksq.......lvedasflpldgkwediislrksfdatilpsgyenesatqykePar.valltntGvv 433
                       f+++  +     +++   +p  g++ ++        lve+a +lp++g+++d+  l++s+           e+ +q+++P + +a+ltntGv 
     EPX72822.1 426 FDLFFAISSSDanAGDTLCCTAPEVGRIANAWqsgsqpsLVESAMYLPIKGFVQDVKCLQNSEERN--------ELVSQFNTPPPsFAVLTNTGVY 513
                    555555555558888888888888888887767889999*****************9999955555........444555455555********96 PP

>> Nucleoporin_C  Non-repetitive/WGA-negative nucleoporin C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.4   7.7     5e-52   4.5e-48     172     575 ..     755    1152 ..     673    1189 .. 0.82

  Alignments for each domain:
  == domain 1  score: 164.4 bits;  conditional E-value: 5e-52
                     .XXXXXXXXXXXXXXXXXXXX.........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHHHHHHHHHHHHHHHHHHHHHHHHXXXXX CS
  Nucleoporin_C  172 enlerlldLtklllkdlfapn.........lssiinrnisrgesieleatllqeicgslcsltdvllfraiErlrwakeqkdkklqnaikllek 256 
                      + e++   ++l++ ++f+ +         + + +n+    g++i+l ++ll+++cgs+cs++dvl+f+a+E l++ake     l+++ +l+e 
     EPX72822.1  755 ISPESQNLCSRLTFGEFFTSKngrevtkelVNALVNKHLRAGGNIDLVSQLLRRRCGSFCSADDVLVFKAVESLKKAKE--TVDLEDRQSLVEL 846 
                     35567777789999999999999999999999999********************************************..4445555555555 PP

                     XXXX.........XXXHHHHHHHHHHHHTSXHHHHHHHHHHHHH..HHHXS....................................SSSXHHH CS
  Nucleoporin_C  257 aydearkeqilkLlsigkleeaielaekledfralvellleianklasdkg....................................ederkel 314 
                     +y+    ++     + + l+ a+e  ++l+ + ++v+l l  a+  a+d +                                    e e+k+ 
     EPX72822.1  847 SYNL--FKKSAHVFTPEDLRLAVEEYKSLNSYVSAVNLALHVAS--ARDDKdqalsylidgmlqndtradvfanrskcyqyvfqildELESKSS 936 
                     5555..4455566******************************8..444444568888888888888888888888888888888755555555 PP

                     H......HHHHHHHSSSXXHHHHHHHHHHHHHTTXGGGGGGX..XXTTHHHHHHHTX....XHHHHHHTHHHHXXSHHHHHHHHHHHHSSSSXX CS
  Nucleoporin_C  315 yekaeelekrielyfekfgkaFayalYdwlisqgqqekLLdlkedtsfilpFLrekp....elakllWiydvkekdfeeAAeiLysLalskeql 404 
                     +e+++ +    +   ++++++F+y++Ydw+ s+g  ++L ++  d+++i ++L+ ++    ++a llW +++k++ ++ AA +L++La+s+ +l
     EPX72822.1  937 EESNQTKASVYNALQQSKDELFHYCFYDWYASKGFADRLIEI--DSPYIQNYLERNStkdvQIAVLLWQFYAKREMYYYAAIVLFDLATSNLSL 1028
                     544444444445557899************************..************************************************** PP

                     XHHHHHH.HHHHX---HHH................HGGGHHHHHHHHHHHHHHHH.......................H-TT..S-HHHHHHHH CS
  Nucleoporin_C  405 vlskrie.LSlakLaqLaeleesekekkglekklekieellevaaiQddllalilpsiegaidekaeveLamekfgkklderpalrqllkdelk 497 
                     +l++rie L +ak +  +     +  +++ +k +  + e+leva+iQddll +il                       +d +  + +  ++el+
     EPX72822.1 1029 NLEQRIEyLTRAKGFGSCH--IPNLLRQKMNKVMLSVCEQLEVASIQDDLLVTIL-----------------------NDVK--IPASKQQELS 1095
                     ************7666666..444444566778889*******************.......................8888..99999***** PP

                     HHHHHS---HHHHHHHTT.........TTTT-HHHHHHHHHHTT---HHH............HHHHHHHHHHHHHHH- CS
  Nucleoporin_C  498 klLkhkildasdLidlltLidtkeeeedplgefelALkvlkvsdlrneeeealekliWRRcvIrddWeelnetkkked 575 
                     k+L+ +il++++L+++++         dplg+ e++L +++ +d+++ +e            I   We++ +t +++ 
     EPX72822.1 1096 KKLNVEILSLTELFNNFA---------DPLGYGEICLSIFQSADYHGLDE------------IIGCWESIVKTTHENA 1152
                     ******************.........***********************............********99987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1314 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       705  (0.0393218); expected 358.6 (0.02)
Passed bias filter:                      524  (0.0292264); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.91u 0.27s 00:00:01.18 Elapsed: 00:00:00.48
# Mc/sec: 8201.82
//
Query:       EPX72823.1  [L=438]
Description: ribosome biogenesis protein Ytm1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.5e-24   83.9   0.2    2.4e-23   82.4   0.2    1.8  1  NLE       NLE (NUC135) domain
    1.2e-20   73.5  13.0    1.3e-05   25.8   0.1    6.8  7  WD40      WD domain, G-beta repeat
     0.0002   20.2   5.6      0.012   14.3   0.1    3.2  3  Nup160    Nucleoporin Nup120/160


Domain annotation for each model (and alignments):
>> NLE  NLE (NUC135) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.4   0.2     4e-27   2.4e-23       1      65 []      11      73 ..      11      73 .. 0.96

  Alignments for each domain:
  == domain 1  score: 82.4 bits;  conditional E-value: 4e-27
         NLE  1 vqvrFvtkdedeslavpgtplsvPasltrkqLselvnkLlkeekpvpFdFlidgellrtsLeehL 65
                vqvrF+t++++  l v +tp+ +P+sl+r++Ls++vn+Llk++kp+pFdFli g+llrtsL++++
  EPX72823.1 11 VQVRFTTRNPE--LTVGDTPILIPTSLKRYGLSQIVNHLLKSDKPTPFDFLIQGNLLRTSLDDYI 73
                8*******988..99**************************6699******************96 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.2   1.8e-05      0.11       6      38 .]     100     130 ..      95     130 .. 0.71
   2 !    6.1   0.0    0.0038        23      19      37 ..     153     170 ..     141     171 .. 0.84
   3 !   17.8   0.0   7.7e-07    0.0046       5      38 .]     190     224 ..     186     224 .. 0.87
   4 !   12.3   0.1     4e-05      0.24       4      38 .]     260     295 ..     257     295 .. 0.78
   5 ?   -0.9   0.0       0.6   3.6e+03      14      34 ..     318     332 ..     306     336 .. 0.73
   6 !   25.8   0.1   2.2e-09   1.3e-05       5      38 .]     347     382 ..     344     382 .. 0.87
   7 ?    0.1   0.0      0.31   1.8e+03      15      35 ..     408     427 ..     394     428 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.8e-05
                 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++  H +++++++   ++++++++s+Dg  r+Wd
  EPX72823.1 100 SFP-HdDWISGVQL--SSDYILTSSYDGIARVWD 130
                 554.8566888844..5555668999*******9 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0038
                 ETTSSEEEEEETTSEEEEE CS
        WD40  19 spdgawlasGsdDgtvriW 37 
                 +p+ ++l+ +s D+++++W
  EPX72823.1 153 NPNTNFLT-SSLDQKIHFW 170
                 68999986.677******* PP

  == domain 3  score: 17.8 bits;  conditional E-value: 7.7e-07
                 EEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGHss.vtslafspdgawlasGsdDgtvriWd 38 
                 + +tGH++ + s++  p+ + ++s+s D+tv +Wd
  EPX72823.1 190 TAFTGHKGlIESVRALPETNIFLSASADKTVGVWD 224
                 459***88899**99999999999999*******9 PP

  == domain 4  score: 12.3 bits;  conditional E-value: 4e-05
                 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 l  ++GH +svt + f +d +   s s D+t++ Wd
  EPX72823.1 260 LFLCEGHsDSVTNVIFAQDPSAAYSVSLDHTIKTWD 295
                 56679**766*99997777666667888*******9 PP

  == domain 5  score: -0.9 bits;  conditional E-value: 0.6
                 EEEEEETTSSEEEEEETTSEE CS
        WD40  14 tslafspdgawlasGsdDgtv 34 
                 ++l      ++la+Gs  +++
  EPX72823.1 318 NDL------HLLACGSTGRSI 332
                 445......789999977766 PP

  == domain 6  score: 25.8 bits;  conditional E-value: 2.2e-09
                 EEEESSSS.EEEEEEETTSSEEEEE.ETTSEEEEEE CS
        WD40   5 rtltGHss.vtslafspdgawlasG.sdDgtvriWd 38 
                  tl+GH++ v++l+ sp++++++++ s D+++r+Wd
  EPX72823.1 347 MTLSGHKNlVSDLCASPENPYMFASvSHDNSCRVWD 382
                 689***666************8766678*******9 PP

  == domain 7  score: 0.1 bits;  conditional E-value: 0.31
                 EEEEETTSSE.....EEEEETTSEEE CS
        WD40  15 slafspdgaw.....lasGsdDgtvr 35 
                 s+      +w     +++G+ D+ + 
  EPX72823.1 408 SV------DWnksigIVTGGTDKQLQ 427
                 66......667776778999899875 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.6   0.4   0.00085       5.1     229     288 ..     113     166 ..     105     227 .. 0.64
   2 !   14.3   0.1     2e-06     0.012     228     256 ..     273     306 ..     263     319 .. 0.80
   3 ?    0.8   0.0     0.024   1.4e+02     232     249 ..     368     385 ..     350     411 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.00085
                 TTTEEEEEETT-EEEEEETTTTEEEEEEE--.-SSSTTS--SSEESEEESSSSEEEE... CS
      Nup160 229 gqtylfalsrdgkLrvWnlltgkclatidllrdeeaqdessskstldpaesslirvsdgg 288
                  ++y+++ s dg  rvW+ + +  l t  l     +  +++ +  ++p +++l+++ d++
  EPX72823.1 113 SSDYILTSSYDGIARVWDKSGQVKLQTTALG----SSLKNVTW--KNPNTNFLTSSLDQK 166
                 799**********************999999....77777777..788888888777555 PP

  == domain 2  score: 14.3 bits;  conditional E-value: 2e-06
                 .....TTTEEEEEETT-EEEEEETTTTEEEEE.E CS
      Nup160 228 i....gqtylfalsrdgkLrvWnlltgkclat.i 256
                 +    + + ++++s+d++++ W+l tg+++a+ i
  EPX72823.1 273 VifaqDPSAAYSVSLDHTIKTWDLITGQTVASrI 306
                 3333478899********************9955 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.024
                 EEEEEETT-EEEEEETTT CS
      Nup160 232 ylfalsrdgkLrvWnllt 249
                 + +++s d+  rvW+++ 
  EPX72823.1 368 MFASVSHDNSCRVWDVRA 385
                 5578***********975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (438 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       317  (0.0176809); expected 358.6 (0.02)
Passed bias filter:                      276  (0.0153941); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.28s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 3070.74
//
Query:       EPX72824.1  [L=299]
Description: ribosome biogenesis protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.4e-13   49.2   0.4    8.8e-13   47.9   0.4    1.8  1  G-patch         G-patch domain
      9e-06   25.7   0.2      9e-06   25.7   0.2    4.0  2  G-patch_2       G-patch domain
     0.0076   15.0  20.5     0.0094   14.7  20.5    1.2  1  Hamartin        Hamartin protein
  ------ inclusion threshold ------
          1    8.7  48.9        1.5    8.2  48.9    1.2  1  CDC27           DNA polymerase subunit Cdc27
        3.1    6.8  40.3        5.4    6.0  40.3    1.3  1  TIMELESS_C      Timeless protein C terminal region
        4.2    5.4  29.6        4.9    5.1  29.6    1.1  1  Hid1            High-temperature-induced dauer-formation prot
        4.8    6.2  29.9        6.2    5.8  29.9    1.2  1  LAP1C           Lamina-associated polypeptide 1C (LAP1C)
          8    6.0  40.5         12    5.4  40.5    1.2  1  DUF572          Family of unknown function (DUF572)


Domain annotation for each model (and alignments):
>> G-patch  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.9   0.4   3.9e-16   8.8e-13       2      45 .]      26      69 ..      25      69 .. 0.97

  Alignments for each domain:
  == domain 1  score: 47.9 bits;  conditional E-value: 3.9e-16
     G-patch  2 sniGvkmLqkmGWkpGqGLGkkeqGiaePieakikkdraGlGak 45
                +++G+k+L+++GW  G GLG++++G+++ i++  k+d  G+Gak
  EPX72824.1 26 DRKGFKLLASYGWQDGNGLGQQQHGRVHNIKVALKDDTLGIGAK 69
                689***************************************97 PP

>> G-patch_2  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.2     4e-09     9e-06      20      60 ..      31      71 ..      27      72 .. 0.94
   2 ?  -16.8  20.1         8   1.8e+04      45      50 ..     192     197 ..     157     243 .. 0.67

  Alignments for each domain:
  == domain 1  score: 25.7 bits;  conditional E-value: 4e-09
   G-patch_2 20 AlLrGMGWkegqgigknkkgrvkpeepkrRpgrlGLGakpa 60
                 lL  +GW++g+g g+++ grv+ +++  + ++lG+Gakp+
  EPX72824.1 31 KLLASYGWQDGNGLGQQQHGRVHNIKVALKDDTLGIGAKPS 71
                5999***********************************97 PP

  == domain 2  score: -16.8 bits;  conditional E-value: 8
   G-patch_2  45 epkrRp 50 
                 e ++R 
  EPX72824.1 192 EKTKRS 197
                 333333 PP

>> Hamartin  Hamartin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7  20.5   4.2e-06    0.0094     460     604 ..     100     235 ..      53     282 .. 0.66

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 4.2e-06
    Hamartin 460 eaesedsvekeeeeaaisqelseiteekketlvsrggldspfsrtleslaksqrrkrlasalssesisdaegaatkkeaksskeaesslekekscsakq 558
                 +++++++++ +++++a+s++l ++  ++    v  g++ s fs ++++ a+ +  +r+a  +s+++ +d++++ tkk+     ++e++ +++ s+s k+
  EPX72824.1 100 AEKAKHRKQLDQRKDAESKNLRSLELAR--RFVLGGTFTSEFSDWMKKAAEDE--NRIAEDSSDNENADSSEKETKKK-----KKEKKSKHSSSSSSKK 189
                 3445556677888899999998888887..56899*****************9..99999999995555555444444.....3333333333333333 PP

    Hamartin 559 sftpieqklesskdcpadeeesensleeklltpspckkaskqkvst 604
                 + ++++++ +++kd++++++e+++s+++k l++s++k +++++ + 
  EPX72824.1 190 KEEKTKRSKKDKKDSKEKKKEKKESSKKKSLSTSDKKDKKEKEEKK 235
                 3333333333444555555555555444444444444433222221 PP

>> CDC27  DNA polymerase subunit Cdc27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2  48.9   0.00066       1.5     190     318 ..     134     260 ..      88     286 .. 0.57

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00066
       CDC27 190 ttkekaekaasskaaslkkkasaksnimksffkakpaekkkkteakeqkveeeseeekekedkeleddsaaeeeeeeekstkkekrrqkklessdeeee 288
                 t++ +  + ++++a+ +++ a ++s+  ++ + +k  +kkkk+++++ ++ ++s++++ek+++ + d+++  +e+++ek + ++k+   + +++d++e+
  EPX72824.1 134 TFTSEFSDWMKKAAEDENRIAEDSSDNENADSSEKETKKKKKEKKSKHSSSSSSKKKEEKTKRSKKDKKD-SKEKKKEKKESSKKKSLSTSDKKDKKEK 231
                 4444444555566666666666666665555555555555555444444444444433333333333333.2344444444443457888889999999 PP

       CDC27 289 erekekekrkrlkkmmeDededdemedvpe 318
                 e++k k krk++    + e++d++ +d++ 
  EPX72824.1 232 EEKKLKRKRKNVSSSASSESDDED-ADTKS 260
                 999999999999998888888882.33333 PP

>> TIMELESS_C  Timeless protein C terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0  40.3    0.0024       5.4     385     515 ..     147     280 ..     136     288 .. 0.62

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0024
                 XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.......................XXXXXXXXX...XX.. CS
  TIMELESS_C 385 eered.elkddedgeeadeseeeedllekkarqrKeglasqeeekldeeelkaaPkkkdkdilfeelrakkkrkikl.....gtnseeEeddialdene 477
                 +e e+  ++d  d+e+ad+se+e++  +k+++++     s ++   +e+ +++   kkdk +  e++++kk+   k         +++E++++ l  + 
  EPX72824.1 147 AEDENrIAEDSSDNENADSSEKETKKKKKEKKSKHSSSSSSKK--KEEKTKRS---KKDKKDSKEKKKEKKESSKKKslstsDKKDKKEKEEKKLKRKR 240
                 6666657888899999****99998777766666644444433..22222233...3333233333333322211112333355677899999999877 PP

                 ........................................ CS
  TIMELESS_C 478 ed.srassgEledndqdskda.aeaeddleiddnkalqra 515
                 ++ s + s E +d+d+d+k++ ++  +++++ + + +  +
  EPX72824.1 241 KNvSSSASSESDDEDADTKSShRKKPTNVHFHTRRKFLAQ 280
                 66245567899999***88872566799999998776555 PP

>> Hid1  High-temperature-induced dauer-formation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1  29.6    0.0022       4.9     584     701 ..     148     266 ..     101     278 .. 0.64

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0022
        Hid1 584 ersne..sarldsideeeeenssessrieesrsesrspslsevpelksslaitddeskaereksatessssqavsqlremsekarakesaesteesrqe 680
                 e +n+  + ++d+++ +++e++ + ++ +e++s+++s s+s+++e+k++ +++d+++++e++k+++ess++++ s++ + ++k++++++ + ++++++ 
  EPX72824.1 148 EDENRiaEDSSDNENADSSEKETK-KKKKEKKSKHSSSSSSKKKEEKTKRSKKDKKDSKEKKKEKKESSKKKSLSTSDKKDKKEKEEKKLKRKRKNVSS 245
                 223334322233333333333332.33333344555666778888888888888888888888888888888777566666666666666666666666 PP

        Hid1 681 satskkspsgmsqsaeekftp 701
                 sa+s++ ++   ++++++ +p
  EPX72824.1 246 SASSESDDEDADTKSSHRKKP 266
                 666666666655555555555 PP

>> LAP1C  Lamina-associated polypeptide 1C (LAP1C)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8  29.9    0.0028       6.2      64     204 ..     139     273 ..      94     290 .. 0.53

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0028
                 XXXXX..XXXXXXXXXXXX..........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXX......XXXXXXXXXXXXXXX CS
       LAP1C  64 lseepkdetEeedsessqsgeeghklsseslgeekldsedsvsssdktgradaqleessaalseeasdrtaasqepsaadsqeaqssghskaeqeeqdt 162
                 +s+  k+ +E+e++ + +s+++++  sse+ +++k ++++s +ss ++++ + + ++ s + +++++++++ ++e+s+++s  + s+++ k+e+ee++ 
  EPX72824.1 139 FSDWMKKAAEDENRIAEDSSDNENADSSEKETKKKKKEKKSKHSSSSSSKKKEEKTKRSKKDKKDSKEKKKEKKESSKKKS-LSTSDKKDKKEKEEKKL 236
                 555556667777776777767777777777776666655555555554444433333333333333344444444444222.22233333333333333 PP

                 XXXXXX..XXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       LAP1C 163 lrrtrllvpeaeshqqetelleeskesaqdtlrkskkksfvk 204
                 +r+ r  v+++      +e  +e+ +++   ++k+++ +f +
  EPX72824.1 237 KRK-RKNVSSSA----SSESDDEDADTKSSHRKKPTNVHFHT 273
                 333.33232222....23333333333333334444444433 PP

>> DUF572  Family of unknown function (DUF572)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4  40.5    0.0052        12     171     330 ..     105     253 ..      88     287 .. 0.31

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0052
      DUF572 171 rkefreekkereeeeedeealkeki................slekikllpedeedekkakllegkte...slfasseesaksakk.kptkkesskekkk 249
                 +++  +++k  e ++ ++ +l+ ++                  e+ +++ ed+ d+++a+  e++t+   + +++s+ s++s++k k++k++ sk+ kk
  EPX72824.1 105 HRKQLDQRKDAESKNLRSLELARRFvlggtftsefsdwmkkAAEDENRIAEDSSDNENADSSEKETKkkkK-EKKSKHSSSSSSKkKEEKTKRSKKDKK 202
                 22222333333333333333333334444333332222221112444444444444444444422221111.111111111111101111111111111 PP

      DUF572 250 eslekklskltkkkad.sslvvrKkkkeeekskeskekteeeskeseeeskkeeetsaeeekeekakkkssslsllvaysds 330
                 +s+ekk +k++++k++  s+  +K kke+e++k + +                               +++++s+  + sd+
  EPX72824.1 203 DSKEKKKEKKESSKKKsLSTSDKKDKKEKEEKKLKRK-------------------------------RKNVSSSASSESDD 253
                 1111111111111111111111111111111111111...............................11111111111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (299 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3689  (0.205756); expected 358.6 (0.02)
Passed bias filter:                      928  (0.0517597); expected 358.6 (0.02)
Passed Vit filter:                       566  (0.031569); expected 17.9 (0.001)
Passed Fwd filter:                       172  (0.0095934); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 1.78u 0.40s 00:00:02.18 Elapsed: 00:00:00.55
# Mc/sec: 1642.01
//
Query:       EPX72825.1  [L=670]
Description: CAMK/CAMKL protein kinase Ppk16 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.5e-67  227.8   0.0      2e-67  227.3   0.0    1.2  1  Pkinase      Protein kinase domain
    2.4e-41  141.7   0.0    3.6e-41  141.2   0.0    1.2  1  Pkinase_Tyr  Protein tyrosine kinase
    1.5e-07   31.0   0.0    2.5e-07   30.3   0.0    1.3  1  Kinase-like  Kinase-like
     0.0005   19.5   0.0     0.0011   18.4   0.0    1.5  1  Kdo          Lipopolysaccharide kinase (Kdo/WaaP) family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  227.3   0.0   4.5e-71     2e-67       1     264 []      31     279 ..      31     279 .. 0.92

  Alignments for each domain:
  == domain 1  score: 227.3 bits;  conditional E-value: 4.5e-71
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHH CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseee 99 
                 y+ ++ +GeGsfGkVy av+  t+ +v++K   +++a       ++rEi+ +++l hpni rlyev+  +d++yl +ey+++gel d+++r+++l+e+ 
  EPX72825.1  31 YRIESVVGEGSFGKVYLAVHLLTNTKVVLKSSCRKQAVI-----LAREIHHHRRLLHPNITRLYEVICAEDRIYLAMEYCPNGELYDYVSRQVVLTEKM 124
                 677899************************998887775.....679**************************************************** PP

                 HHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS..BCTTTSCGGGS-HHHHTTSCB.SHHHHHHHHHHHHHHHHHSS- CS
     Pkinase 100 akkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk..ltsfvgtseYlAPEvlkeney.skkvDvWslGvilyelltgkp 195
                 + k+++q++ +++ylHs+g++HrDlK eNi++d++ ++Ki+DFG+++  + s +  +++++gt  Y APE++ +++y ++ +D+WslGvi+y ++ g+ 
  EPX72825.1 125 TCKLLWQLCCAIKYLHSQGCVHRDLKLENIFLDKNFDIKIGDFGFSRDTDCSRRtfMSTRCGTVAYSAPEIVLGQKYiGECADIWSLGVIMYAMMVGRL 223
                 *********************************9999**********999887788****************666666********************* PP

                 STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 196 pfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 pf +++++ + +k++++             +   +++is++a+dll +ll+kd + R++++++++hp++
  EPX72825.1 224 PFDEDDTSLTEHKIINE-------------QPFIPETISPNARDLLIRLLCKDYRFRPSIDQIISHPFF 279
                 ***66555555555555.............5667899*******************************8 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.2   0.0   7.9e-45   3.6e-41       3     257 ..      33     275 ..      31     276 .. 0.90

  Alignments for each domain:
  == domain 1  score: 141.2 bits;  conditional E-value: 7.9e-45
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTS CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekekl 100
                  +++ +GeG+fGkV+ +        +++kV++K+    ++ ++   l +e++  ++l hpni +l+ v+  e+++++ +ey+++G+L +++ ++    l
   EPX72825.1  33 IESVVGEGSFGKVYLAVHL----LTNTKVVLKSS---CR-KQAVILAREIHHHRRLLHPNITRLYEVICAEDRIYLAMEYCPNGELYDYVSRQ--VVL 120
                  67899***********999....8999***9998...33.3367799********************************************98..9** PP

                  BHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE.EEHHHHHHHHHHHHHH CS
  Pkinase_Tyr 101 tlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk.ftsksDvWsfGvllwE 197
                  t k ++++ +q++++++yL+s+ +vHrdl   N++l++n  +ki+DfG +rd+ + ++ +  +++   v + apE++  +k + + +D+Ws Gv+++ 
   EPX72825.1 121 TEKMTCKLLWQLCCAIKYLHSQGCVHRDLKLENIFLDKNFDIKIGDFGFSRDT-DCSRRTFMSTRCGTVAYSAPEIVLGQKyIGECADIWSLGVIMYA 217
                  *****************************************************.55555666667789*******999888346779*********** PP

                  HHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 198 iftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfselve 257
                  ++  g+ p+ + +++ + +k+ + ++   pe+++++  +l+ + + +d + Rp++ ++++
   EPX72825.1 218 MMV-GRLPFDEDDTSLTEHKIIN-EQPFIPETISPNARDLLIRLLCKDYRFRPSIDQIIS 275
                  999.*****99877777777765.5677999*************************9986 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.3   0.0   5.5e-11   2.5e-07     143     260 ..     124     235 ..     107     267 .. 0.73

  Alignments for each domain:
  == domain 1  score: 30.3 bits;  conditional E-value: 5.5e-11
  Kinase-like 143 tiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvl..seve..kgfaPpEllgsrggytrknktkmthkldaWql 236
                    ++ll   ql   + +L+++g vh +++ +n++ld+++ +++g+f+  +    + +   s+ +  ++++ pE++  ++         +    d W l
   EPX72825.1 124 MTCKLL--WQLCCAIKYLHSQGCVHRDLKLENIFLDKNFDIKIGDFGFSRDTDCSRRTfmSTRCgtVAYSAPEIVLGQK--------YIGECADIWSL 211
                  444444..48889999*****************************99766554444332366668999*****987622........355678***** PP

  Kinase-like 237 GlviyriwclklPltlateeakee 260
                  G+ +y +    lP++++     e 
   EPX72825.1 212 GVIMYAMMVGRLPFDEDDTSLTEH 235
                  ***************987766655 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   2.4e-07    0.0011     105     155 ..     110     160 ..     102     178 .. 0.87

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 2.4e-07
         Kdo 105 LedllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqee 155
                 L d++ +  +l e+++ +ll ++  +i+ lh+ g  H+dl   ni+l+++ 
  EPX72825.1 110 LYDYVSRQVVLTEKMTCKLLWQLCCAIKYLHSQGCVHRDLKLENIFLDKNF 160
                 6677777556999***********************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (670 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       848  (0.0472977); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.29s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 4614.44
//
Query:       EPX72826.1  [L=499]
Description: centrosomal transforming acidic coiled-coil protein Alp7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.2e-13   50.4  28.0    5.6e-10   39.5   2.2    4.9  5  Fungal_TACC    Fungal Transforming acidic coiled-coil (TACC) 
  ------ inclusion threshold ------
       0.56    9.3  30.2         11    5.0  10.6    2.7  2  CCDC144C       CCDC144C protein coiled-coil region
        3.4    7.8  36.4       0.73    9.9   6.0    3.5  3  TPR_MLP1_2     TPR/MLP1/MLP2-like protein


Domain annotation for each model (and alignments):
>> Fungal_TACC  Fungal Transforming acidic coiled-coil (TACC) proteins
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.66   3.9e+03      13      48 ..      45      80 ..      42      87 .. 0.73
   2 ?    3.1   0.5     0.022   1.3e+02      43      71 ..     242     270 ..     236     293 .. 0.78
   3 !   39.5   2.2   9.5e-14   5.6e-10       3      48 ..     343     388 ..     341     395 .. 0.92
   4 !    9.8   1.2   0.00018         1      44      76 ..     402     434 ..     399     435 .. 0.89
   5 !   13.4   2.0   1.3e-05      0.08      36      76 ..     447     487 ..     440     488 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.66
  Fungal_TACC 13 LYvqYSsKHEqKVkllkkgyeakyqkkldklelenk 48
                 LY + S++      + k++ +++ +++l++le+++ 
   EPX72826.1 45 LYPKLSARPANTQYQFKESLNKRVNDRLHSLEMHRP 80
                 666666666666677888898999999998888765 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.022
  Fungal_TACC  43 lelenkslkqeieqLkkqleaerkEKqeL 71 
                   ++++ +l+ e+e+ k +l+  ++E ++L
   EPX72826.1 242 SQKQQAALEAEVESYKAKLNGSQHEINSL 270
                  56777888888888888888888887766 PP

  == domain 3  score: 39.5 bits;  conditional E-value: 9.5e-14
  Fungal_TACC   3 nkrlqelaedLYvqYSsKHEqKVkllkkgyeakyqkkldklelenk 48 
                  ++r++++aedL  qYS+KH qK++  k +y +ky   +++l+++  
   EPX72826.1 343 QERMEKVAEDLHAQYSAKHAQKISAFKVNYSKKYDFTIQELQQQVT 388
                  689**************************************99865 PP

  == domain 4  score: 9.8 bits;  conditional E-value: 0.00018
  Fungal_TACC  44 elenkslkqeieqLkkqleaerkEKqeLlklld 76 
                  ele+k+l+++ ++L+kqle + +E+qe+   l+
   EPX72826.1 402 ELEKKTLQEDNDTLRKQLERAIQERQEMSVFLE 434
                  689***********************9876666 PP

  == domain 5  score: 13.4 bits;  conditional E-value: 1.3e-05
  Fungal_TACC  36 yqkkldklelenkslkqeieqLkkqleaerkEKqeLlklld 76 
                  + +k ++ + + + l+++i+ L++ql++er E+q ++++ +
   EPX72826.1 447 FTQKQSEQTDNMNVLTTQIQALQEQLKIERDERQAVIQMSE 487
                  5555556566667899*********************9977 PP

>> CCDC144C  CCDC144C protein coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0  19.1     0.015        89      79     191 ..     239     345 ..     236     428 .. 0.72
   2 ?    5.0  10.6    0.0019        11      13      89 ..     410     482 ..     399     495 .. 0.81

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.015
    CCDC144C  79 LekekqnkerleaevesyrsrLaaAiqdheqsqtskrdlelalqrerdewlrlqdklnfdvsnlkdknevLsqqLskaeskansLenelhetrdaLrek 177
                 L+  ++++  leaevesy+++L++  ++++  +ts ++l  +l   +++++ lq++  +   + k +++ L +  ++ ++ ++s+             +
  EPX72826.1 239 LNASQKQQAALEAEVESYKAKLNGSQHEINSLHTSLSYLSGQLIAMNEQYQLLQNEYAIAS-SAKGTSQKLIEAQEEDKTSVSSISSSSSAR-----RQ 331
                 6677888999*********************************************999654.444444444444444444444444444444.....44 PP

    CCDC144C 178 tlllesvqrdlsqa 191
                 t   e v + l++ 
  EPX72826.1 332 TYTQEDVDKLLQER 345
                 44444444444333 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.0019
    CCDC144C  13 leldtiknqsqekEkkyledieilkeknddlqkslKlneetltktvfqyngqLnvlkaentmlnskLekekqnkerl 89 
                  + dt+++q     ++ +++ + +   +++++ ++  n+ + t++ ++++  +nvl+++ + l+ +L+ e+ +++ +
  EPX72826.1 410 EDNDTLRKQL----ERAIQERQEMSVFLENFKADMASNDRSFTQKQSEQTDNMNVLTTQIQALQEQLKIERDERQAV 482
                 3444444332....355788888888899*******************************************99875 PP

>> TPR_MLP1_2  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6  15.1      0.22   1.3e+03       4     105 ..     240     337 ..     238     358 .. 0.86
   2 ?    8.9   5.3   0.00025       1.5      52     112 ..     358     419 ..     342     420 .. 0.89
   3 ?    9.9   6.0   0.00012      0.73      61     118 ..     414     471 ..     411     474 .. 0.96

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.22
  TPR_MLP1_2   4 ksleeeikslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeele 102
                 ++ ++++++l++e e+++akl+  q+++++ + +++        +l+  +e+ + lq+  + ++++k + ++l ++ e+ k++++   +s + +++++ 
  EPX72826.1 240 NASQKQQAALEAEVESYKAKLNGSQHEINSLHTSLSYLSG----QLIAMNEQYQLLQNEYAIASSAKGTSQKLIEAQEEDKTSVSSISSSSSARRQTYT 334
                 6789999999999999999999999999999999999998....***************************************************9999 PP

  TPR_MLP1_2 103 kel 105
                 +e 
  EPX72826.1 335 QED 337
                 883 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00025
  TPR_MLP1_2  52 haedvkelqalreel.nelkaeiaelkaeaesakaeleeseesweeqkeelekelselekri 112
                  a+ +++++a++  + +++  +i+el++++ +a a+ +     we +k++l+++ + l+k++
  EPX72826.1 358 SAKHAQKISAFKVNYsKKYDFTIQELQQQVTAAAANSNVGDPTWELEKKTLQEDNDTLRKQL 419
                 578899999999998567888***********************************999987 PP

  == domain 3  score: 9.9 bits;  conditional E-value: 0.00012
  TPR_MLP1_2  61 alreelnelkaeiaelkaeaesakaeleeseesweeqkeelekelselekriedlneq 118
                 +lr++l+++ +e++e+   +e+ ka+++ +  s +++++e  ++++ l+++i+ l+eq
  EPX72826.1 414 TLRKQLERAIQERQEMSVFLENFKADMASNDRSFTQKQSEQTDNMNVLTTQIQALQEQ 471
                 79*******************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (499 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2681  (0.149534); expected 358.6 (0.02)
Passed bias filter:                      505  (0.0281667); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                        30  (0.00167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.92u 0.31s 00:00:01.23 Elapsed: 00:00:00.53
# Mc/sec: 2826.98
//
Query:       EPX72827.1  [L=332]
Description: pyridoxal reductase Plr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-71  241.3   0.0    1.5e-71  241.0   0.0    1.0  1  Aldo_ket_red  Aldo/keto reductase family
  ------ inclusion threshold ------
      0.016   15.6   0.0        0.1   13.0   0.0    2.2  2  DUF836        Glutaredoxin-like domain (DUF836)


Domain annotation for each model (and alignments):
>> Aldo_ket_red  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  241.0   0.0   1.7e-75   1.5e-71       1     289 [.      11     308 ..      11     312 .. 0.97

  Alignments for each domain:
  == domain 1  score: 241.0 bits;  conditional E-value: 1.7e-75
                   .EEEE-SSS-ST..TS-HHHHHHHHHHHHHTT--EEE--TT-...TTTHHHHHHHHHHHH-TTTGGG-EEEEEE--SSSTTSSSS-HHHHHHHHHHH CS
  Aldo_ket_red   1 elglGtwqlgsk.eeiskeealellrraleaGinffDtAevY...gkgqseellGealkksrkkreeviiatKvdlrdaeiksglskenireslees 93 
                   ++g+G++ ++++ e++++e+a+e++++a+e+G++f++ +e+Y    ++ +  ll++++kk++++  +v++++K+ + d++  +++ +e+i +s+++ 
    EPX72827.1  11 PMGFGLMGFTWRtEQTPDEQAFEVMDYAVEHGVTFWNGGEFYgmdPPTANLMLLARYFKKRPENANKVFLSIKG-GIDETFAPRGDEESISKSVNNV 106
                   69****************************************76667788889*********************.********************** PP

                   HHHHT-.S-EEEEEE-S--TTS-.HHHHHHHHHHHHHTTSEEEEEEES--HHHHHHHHHTTT--EEEEE-B-BTT.-HHHHTTHHHHHHHTT-EEEE CS
  Aldo_ket_red  94 lkrLgt.dyvDllllHrpdpslpsieevldaleelvkeGkiraiGvSnfsveqlekakkkkkvkivavqveynll.releeegllelckkkgvplia 188
                   lk L+  +++Dl++++r+d+s+p iee++++l+++v++Gki  +G+S+ s++ +++a  +++++i+av++ey+ll r++ee+g+l++ck++++p+ia
    EPX72827.1 107 LKHLDGtKKLDLFECARVDSSVP-IEEQMKILKKFVDAGKIGCVGLSEASADTIRRA--HSVLPIAAVEAEYSLLsRDIEENGVLSTCKNLDIPVIA 200
                   ****987****************.*******************************99..************************************** PP

                   BSTTGGGTTGTTTSS---SSSCCC-------......TS-HHHHHHHHHHHHHHHHTT--HHHHHHHHHTTS.TT-SEEEE--SSHHHHHHHHGGGG CS
  Aldo_ket_red 189 ysplggGlltgkyqseedkedkeprkdlkrd......ertsknldaaeelselakehgvslaqlalryalsq.pavgivipgasnieqlednldale 278
                   ysp+++Glltg +++ ed ++++++  + +       e ++knl+++++l++ ak+++ +l ++a++++++  ++++i+ipga+ + +le+nl+a++
    EPX72827.1 201 YSPIARGLLTGTVKKAEDLQRFTNAFPFLNYldrfqpEVFEKNLNCIQALEAQAKSYNQTLPEMAISFLIAVgEGKVIPIPGATHVGRLEQNLKAVS 297
                   *********************9999998888***************************************9899*********************** PP

                   ----HHHHHHH CS
  Aldo_ket_red 279 lklseeevael 289
                    +ls+ +v+e+
    EPX72827.1 298 KPLSAAQVKEI 308
                   *********98 PP

>> DUF836  Glutaredoxin-like domain (DUF836)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   1.1e-05       0.1      16      59 ..     162     205 ..     156     226 .. 0.88
   2 ?   -0.9   0.0      0.25   2.3e+03      43      55 ..     254     266 ..     230     270 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.1e-05
                 HHHHHHHHCCCTTEEEEEEETTT-CCCHCCCCTTTTEEEECTTC CS
      DUF836  16 akekLkelkleegleleviDIakdeeleakYgleipvlalegvk 59 
                 a+++L  +++e +++l+ +DI+++ +l +  +l+ipv+a+ ++ 
  EPX72827.1 162 AHSVLPIAAVEAEYSLLSRDIEENGVLSTCKNLDIPVIAYSPIA 205
                 6677777899******************************9965 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.25
                 HCCCCTTTTEEEE CS
      DUF836  43 eakYgleipvlal 55 
                  + Y+++ p++a+
  EPX72827.1 254 AKSYNQTLPEMAI 266
                 3589999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (332 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       522  (0.0291148); expected 358.6 (0.02)
Passed bias filter:                      516  (0.0287802); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.30s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 2173.93
//
Query:       EPX72828.1  [L=605]
Description: GTPase activating protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.9e-34  117.4  17.5    1.8e-32  112.7   1.6    3.2  3  RabGAP-TBC  Rab-GTPase-TBC domain
  ------ inclusion threshold ------
      0.086   13.0   0.5       0.24   11.6   0.5    1.8  1  Lge1        Transcriptional regulatory protein LGE1


Domain annotation for each model (and alignments):
>> RabGAP-TBC  Rab-GTPase-TBC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   4.1   1.3e-05      0.12       2      64 ..      38     135 ..      37     144 .. 0.71
   2 !  112.7   1.6     2e-36   1.8e-32      26     196 ..     190     391 ..     167     409 .. 0.75
   3 ?   -3.6   0.1      0.81   7.3e+03      25      59 ..     472     506 ..     462     520 .. 0.60

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1.3e-05
  RabGAP-TBC   2 elRgevWklllgyep....................................evkrlkksekkqeksekeksklekseeske.lsqIkkDvprtfpeses 63 
                 ++R+++W+l+l y+p                                        +  ++++   + +++sk+++  e+++ l+qI+kD+ rt+p  ++
  EPX72828.1  38 SIRSKAWMLMLEYLPtdksqwkevlrshretytsfiqellidpwkklslqeD--AEIIEAEDHPLNTNKDSKWKQYFEDNHtLEQIDKDIRRTLPALSF 134
                 68999*******99999*************************9999986431..2222223333333344444444444556*************3333 PP

  RabGAP-TBC  64 f 64 
                 f
  EPX72828.1 135 F 135
                 3 PP

  == domain 2  score: 112.7 bits;  conditional E-value: 2e-36
  RabGAP-TBC  26 kkqeksekeksklekseeske.lsqIkkDvprtfpesesfknkqgqnqLeriLkaysiynpevgYcqGmndivaplllvsldeee...........aFw 112
                 +++ +s  ++ + e+ ++s++  ++ +k +++t +e+++++ ++ +++ eriL++y++ np +gY+qGmn ++apl+ ++l +             +F+
  EPX72828.1 190 HRSLQSRIYQLDDESPTSSSIlSNKPRKSLENTSQETTEDELGIHREATERILFIYAKLNPGIGYVQGMNELLAPLY-YVLATDPtyenrfycecdSFF 287
                 3334444444444444444454555566666777766999999**********************************.444444445699999999*** PP

  RabGAP-TBC 113 cfvsLlekyklrdlytssl.....pglkrklkvleellkkkdpklykhlkeegldlelfaikwfltlflrefpletvlrlwD.lllege.......... 195
                 +f++++   ++rdly+++l     +g+   +  + + l+++d +l++ ++++++++++++++w+ +lf++efpl  v+rlwD +++ ++          
  EPX72828.1 288 LFTKMM--VHVRDLYEKTLdhdsgHGIYFLMSNFTDRLRQYDFELWECMQKKEINPTYYSFRWYTCLFTQEFPLPDVIRLWDsIIADQTrarllgkned 384
                 ******..99******9995554455999999**************************************************66664334444555555 PP

  RabGAP-TBC 196 ......k 196
                        
  EPX72828.1 385 gfngafD 391
                 5555544 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 0.81
  RabGAP-TBC  25 ekkqeksekeksklekseeskelsqIkkDvprtfp 59 
                 ++  ++s+k++s ++ + +sk+++  + D +  fp
  EPX72828.1 472 MRATYNSVKNSSSQNVKLPSKDQEEPSSDSKSFFP 506
                 44455555555666666666666666666666666 PP

>> Lge1  Transcriptional regulatory protein LGE1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.5   2.7e-05      0.24      17      57 ..      85     125 ..      56     127 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2.7e-05
        Lge1  17 kiesklkeiesldkqleelklkvlkleleldlleeqierda 57 
                 ++++ ++ ie+ d+ l   k  ++k+++e ++++eqi++d+
  EPX72828.1  85 SLQEDAEIIEAEDHPLNTNKDSKWKQYFEDNHTLEQIDKDI 125
                 78889999999999*************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (605 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       733  (0.0408835); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.23s 00:00:00.86 Elapsed: 00:00:00.44
# Mc/sec: 4089.47
//
Query:       EPX72829.1  [L=659]
Description: RhoGAP [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-08   33.1   0.7    1.2e-07   31.7   0.7    1.7  1  RhoGAP    RhoGAP domain


Domain annotation for each model (and alignments):
>> RhoGAP  RhoGAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.7   0.7   6.6e-12   1.2e-07      47     149 ..     478     584 ..     459     587 .. 0.87

  Alignments for each domain:
  == domain 1  score: 31.7 bits;  conditional E-value: 6.6e-12
                 TTTTSCHHHHHHHHHHHHHHSSSTTTTGGHHHHHHH....HHTSSSHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHHHTHHHH---HHHHHHHHHH CS
      RhoGAP  47 dleeedvhavaslLKrfLrelpepLltkelyeelie....aaksedeeerlealkellekLPkenrdtLryLlehLkrvaenskenkMtaknLaivfaP 141
                  le++ +h +a  LK+ L e+ ++L+  ++y+ + +     ++ +d e r+ ++++ l +L  +  +tL+ +++h++ +a+ ++  k  ++ +a +++P
  EPX72829.1 478 VLEKYPLHIIAFSLKLCLLEMSDSLIRSSFYDYFNAlyltYTEDKDIEHRVYSIRQCLLHLHSTPLRTLEDIISHFHFFADSAQFSKDHLYKIAKIISP 576
                 789999**************************99974443444477778899*********************************************** PP

                 HHHT-TSS CS
      RhoGAP 142 tLlrpkse 149
                 ++lrp+++
  EPX72829.1 577 CILRPPKN 584
                 *****986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (659 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       797  (0.0444531); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.28s 00:00:00.93 Elapsed: 00:00:00.48
# Mc/sec: 4129.49
//
Query:       EPX72830.1  [L=336]
Description: meiotic recombination protein Rec24 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.1e-28   98.6   8.0    1.1e-27   97.5   8.0    1.5  1  Mei4           Meiosis-specific protein Mei4
  ------ inclusion threshold ------
      0.044   13.9   0.7       0.19   11.8   0.1    2.2  2  Trans_reg_C    Transcriptional regulatory protein, C terminal
       0.36   10.8   2.2       0.55   10.3   0.1    2.2  2  VitD-bind_III  Vitamin D binding protein, domain III


Domain annotation for each model (and alignments):
>> Mei4  Meiosis-specific protein Mei4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.5   8.0   1.8e-31   1.1e-27      15     292 ..       8     309 ..       2     325 .. 0.90

  Alignments for each domain:
  == domain 1  score: 97.5 bits;  conditional E-value: 1.8e-31
        Mei4  15 eevklaialaiIrskppgksskeyaeaLakivedqe.tlwksalslle.............gdveevlaLkqk...........lLlknlseglinkre 88 
                  e klaia+ i++ kp++  + +y++ L+k+++d   +  k +l + +             + v e l+L +k           +Ll+n++e l++kr 
  EPX72830.1   8 DETKLAIAWSIVKNKPKEERIDAYVKRLRKQLQDEKnHELKARLFAEKllnqektklqlktSFVFETLNLPSKvlkkeindidlYLLSNIYECLQEKRA 106
                 589*****************************9865155577776666888888888888888889998888899999999999999999999999999 PP

        Mei4  89 nSksiykwvapkengllahLeilynflglkrlqks............................lflkkDvessvisdslvqlldyllarykipllktke 159
                 +S+             ++   + y f g +r++k+                              lkkD+++  i+ +l++l +++l            
  EPX72830.1 107 SSDG------------VSLKTFNYVFDGIFRFLKCsadprisstkdypdeffakikslfedilILLKKDLRMIQIAIRLAELAEFVLH----------- 182
                 9998............4445789999***********************9999999999999999***********************........... PP

        Mei4 160 idlralsiitqllddvnasnlilvkslkkleeflkeLeqilLnskslariqsqeslketlvkl.gsc...skvrnfiirlLfseillkkaeidfkwLqs 254
                      l++ t  ++++na  +  v  ++k+++f+k+Leq ++ + s a  +  e+l +++v    +c   +k+  f  rlL+se++++ +ei f++L+s
  EPX72830.1 183 -----LIVDTHRIMQTNAATGYPVSPRAKFLDFYKFLEQSIFLKLSTAAPNLLEQLVHQVVSQlETCflnCKSADFETRLLYSECFFSFTEIFFPCLHS 276
                 .....9999****************************************************987999******************************** PP

        Mei4 255 fadqLsdaadYknlcslvfilidsiineqLlkkkteqe 292
                 ++ ++s+ a+     s v+ l++ i  e++ +++ +++
  EPX72830.1 277 YDLRISKIAN-----SGVRKLRNLIQQEEIHTHEANNS 309
                 ******9999.....88888888888888887777665 PP

>> Trans_reg_C  Transcriptional regulatory protein, C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   3.2e-05      0.19      40      63 ..      22      44 ..      12      50 .. 0.79
   2 ?   -0.9   0.0      0.31   1.8e+03      49      70 ..     288     304 ..     282     306 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.2e-05
                 TSHTHHHHHHHHHHHHHHHTTTTS CS
  Trans_reg_C 40 dvddrtvdvhisrLRkkLeddekk 63
                 ++ ++ +d++++rLRk L+d++ +
   EPX72830.1 22 KPKEERIDAYVKRLRKQLQDEK-N 44
                 578999**************43.3 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.31
                  HHHHHHHHHHTTTTSSSSEEEE CS
  Trans_reg_C  49 hisrLRkkLeddekkprlIetv 70 
                   +++LR+ +++     ++I+t+
   EPX72830.1 288 GVRKLRNLIQQ-----EEIHTH 304
                  58999999999.....567775 PP

>> VitD-bind_III  Vitamin D binding protein, domain III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.2      0.29   1.8e+03      14      25 ..      31      42 ..      24      59 .. 0.78
   2 ?   10.3   0.1   9.2e-05      0.55       9      48 ..     205     244 ..     203     250 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.29
  VitD-bind_III 14 yKkrlaeklkkk 25
                   y krl+++l+ +
     EPX72830.1 31 YVKRLRKQLQDE 42
                   889999999764 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 9.2e-05
  VitD-bind_III   9 ltFleyKkrlaeklkkklPeaspeelkelvekrsdfAStC 48 
                     +Fl++ k l++++  kl +a+p+ l++lv + ++   tC
     EPX72830.1 205 AKFLDFYKFLEQSIFLKLSTAAPNLLEQLVHQVVSQLETC 244
                    68****************************9988777666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (336 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1198  (0.0668191); expected 358.6 (0.02)
Passed bias filter:                      652  (0.0363657); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.44
# Mc/sec: 2291.60
//
Query:       EPX72831.1  [L=145]
Description: ribosomal protein subunit L25 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      8e-19   68.2   4.7    1.5e-18   67.4   4.6    1.4  1  Mitoc_mL59  Mitochondrial ribosomal protein mL59


Domain annotation for each model (and alignments):
>> Mitoc_mL59  Mitochondrial ribosomal protein mL59
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.4   4.6   8.1e-23   1.5e-18       3     128 ..      16     130 ..      14     131 .. 0.81

  Alignments for each domain:
  == domain 1  score: 67.4 bits;  conditional E-value: 8.1e-23
  Mitoc_mL59   3 lkrffareppsalsasaakaarlpnPflptknpktgrWapPkySlRrqaeLvKaAkksgveellPpgpKstkfkeeraverglrvkgtagkkkmfkGhk 101
                 lk+f+++ pp+++++ ++k+    nPflpt+np +g  ++P+yS Rrqa+++K+Ak + +e+llP+    +k +        +r   + g   + kG+ 
  EPX72831.1  16 LKKFLQKFPPENAQTWSTKS-DRINPFLPTRNPINGVLRDPHYSNRRQADIFKEAKYHKLEHLLPQEMTWNKDS--------SRHILK-G-VLFPKGRI 103
                 89********9999988887.588*****************************************222222222........222222.2.56889999 PP

  Mitoc_mL59 102 wERtkeerlekrrkaledmpkrirewk 128
                  ER++ e l+  +k+ ++  ++  ++k
  EPX72831.1 104 AERRRDEILQTKQKKFAESIEKTDNFK 130
                 999999999999999988888877777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       808  (0.0450667); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.27s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1047.11
//
Query:       EPX72832.1  [L=676]
Description: lipin Ned1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      1e-97  326.0   0.0    1.5e-97  325.5   0.0    1.2  1  LNS2             LNS2 (Lipin/Ned1/Smp2)
    5.6e-42  141.9   0.0    1.1e-41  140.9   0.0    1.5  1  Lipin_N          lipin, N-terminal conserved region
     0.0011   18.6   0.0     0.0064   16.1   0.0    2.2  2  Acid_phosphat_B  HAD superfamily, subfamily IIIB (Acid phosph
     0.0089   16.9   3.1       0.03   15.2   3.1    2.0  1  WRNPLPNID        Putative WW-binding domain and destruction b
  ------ inclusion threshold ------
      0.026   14.0   0.0      0.043   13.3   0.0    1.3  1  DUF2608          Protein of unknown function (DUF2608)
       0.19   11.8   0.0       0.46   10.6   0.0    1.6  1  Hydrolase_6      Haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> LNS2  LNS2 (Lipin/Ned1/Smp2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  325.5   0.0    5e-101   1.5e-97       1     226 []     339     565 ..     339     565 .. 0.98

  Alignments for each domain:
  == domain 1  score: 325.5 bits;  conditional E-value: 5e-101
        LNS2   1 kslrltseqlkslnLkeGkneieFsvttklqgtaeveakiylwksddkivisdidgtitksdvlGhilpllgkdwthkgvaklyskikengYkilylsa 99 
                 k+lrlts+ql+slnLk+Gkn+++Fsv+    g+a+++a++++w+++d +visdidgtitksd+lGh+++l+gkdwth+gvakly++i++ngYki+yl++
  EPX72832.1 339 KTLRLTSDQLRSLNLKSGKNDLSFSVNG---GKATCTANLFFWRYSDPVVISDIDGTITKSDALGHMFTLIGKDWTHAGVAKLYTDITNNGYKIMYLTS 434
                 79*************************7...******************************************************************** PP

        LNS2 100 raigqaeltreylksveqdgvkLPkgPvllspdrllsalkreviekkpeefkiacLkdikklfp..eeknpfyagfGnritdvisYkavgvpksrifti 196
                 r++gqa++tr+yl+++eq+gv LP+gPv+lspdr+++al+revi +kpe+fk+acL+d+ +lf   + ++pfyagfGnritd+isY++v vp +rifti
  EPX72832.1 435 RSVGQADSTRHYLQNIEQNGVCLPDGPVILSPDRTMAALHREVILRKPEVFKMACLRDLCNLFAlpAPRTPFYAGFGNRITDAISYNHVRVPPTRIFTI 533
                 ***************************************************************8667788***************************** PP

        LNS2 197 npkgelkee..llkklkssyeslselvdkiFP 226
                 n++ge++ e  + + ++s+y  +++lvd +FP
  EPX72832.1 534 NSSGEVHIEllQRSGYRSTYVYMNDLVDYFFP 565
                 ********97777899***************9 PP

>> Lipin_N  lipin, N-terminal conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.9   0.0   3.7e-45   1.1e-41       1     102 []       1     100 [.       1     100 [. 0.99

  Alignments for each domain:
  == domain 1  score: 140.9 bits;  conditional E-value: 3.7e-45
     Lipin_N   1 mnyvgkvlssvkelykeinpatlsGaiDvivveqedgelkcspfhvrFgklkvlrskekvvdievNgeevdlkmklgeaGeafFveeteeeeevpeela 99 
                 m+yvg++++sv++++++inp+tlsGaiD+ivveqedg+l+cspfhvrFgk+++l +++k+v+++vNg+ +d++mklg+ GeafFv+ t  e+ vp+el+
  EPX72832.1   1 MQYVGRAFDSVTKTWNSINPSTLSGAIDLIVVEQEDGTLACSPFHVRFGKFSLLLPSDKKVEFSVNGQLTDFNMKLGDGGEAFFVFAT--ENAVPKELQ 97 
                 9***************************************************************************************..9******** PP

     Lipin_N 100 tsp 102
                 tsp
  EPX72832.1  98 TSP 100
                 *98 PP

>> Acid_phosphat_B  HAD superfamily, subfamily IIIB (Acid phosphatase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1      0.61   1.8e+03      73      84 ..     382     393 ..     368     397 .. 0.85
   2 !   16.1   0.0   2.1e-06    0.0064     116     155 ..     410     449 ..     402     473 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.61
                      EEEEEE--BTTT CS
  Acid_phosphat_B  73 kdavvfDiDeTv 84 
                       ++v+ DiD T+
       EPX72832.1 382 DPVVISDIDGTI 393
                      579********8 PP

  == domain 2  score: 16.1 bits;  conditional E-value: 2.1e-06
                      CCECCHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHHHHH CS
  Acid_phosphat_B 116 kaipgalelikkvverGvkiffvsgRseeqkaaTvenLkk 155
                       + +g  +l+  ++++G+ki++++ Rs  q + T   L++
       EPX72832.1 410 WTHAGVAKLYTDITNNGYKIMYLTSRSVGQADSTRHYLQN 449
                      5667889***************************875554 PP

>> WRNPLPNID  Putative WW-binding domain and destruction box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   3.1     1e-05      0.03       2      55 ..     577     636 ..     576     643 .. 0.51

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1e-05
   WRNPLPNID   2 eFnSFlFWRnPLPeidleLeeLllldse.aeessegesvdedeeaeee........eeeeeee 55 
                 +F++  FWR+PLPe+++e  e     ++ ++ s+ +e+v++    +++        ++ee+++
  EPX72832.1 577 NFTDVNFWRSPLPELSDEEDEPK---KKsPKPSKVTELVEKAPPVNDNdsdqinmfNDEEKDD 636
                 789999***********654322...2222222222222222222222233444454444444 PP

>> DUF2608  Protein of unknown function (DUF2608)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   1.4e-05     0.043      71     122 ..     399     450 ..     385     481 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.4e-05
     DUF2608  71 lgllyelgkmklvekevpslvnnlqnqgttvlaLTarsptlrtatlreLksl 122
                 lg ++ l     + + v++l ++++n+g++++ LT+rs+   + t + L+++
  EPX72832.1 399 LGHMFTLIGKDWTHAGVAKLYTDITNNGYKIMYLTSRSVGQADSTRHYLQNI 450
                 56777888888999******************************99998874 PP

>> Hydrolase_6  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00015      0.46       1      74 [.     385     473 ..     385     487 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00015
                  EEEESTTTSE............ETTEE-TTHHHHHHHHHHTT-EEEEEE--...-SS-HHHHHHHHHHTT----GGGEEEHHHHHHHHH CS
  Hydrolase_6   1 flfDidGvLw............rgdkaipgaaealnalraagkpvvllTNn...sskseeeyakkleklgvditeeqvvtsataaaeyl 74 
                  +++DidG++              +d    g+a++ + ++++g+++++lT +      s ++y++ +e+ gv + +  v+ s + + + l
   EPX72832.1 385 VISDIDGTITksdalghmftliGKDWTHAGVAKLYTDITNNGYKIMYLTSRsvgQADSTRHYLQNIEQNGVCLPDGPVILSPDRTMAAL 473
                  57899999996666555555533566789*********************933334677889999999999999988888866555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (676 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       564  (0.0314574); expected 358.6 (0.02)
Passed bias filter:                      452  (0.0252106); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.59u 0.29s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 4588.80
//
Query:       EPX72833.1  [L=203]
Description: COP9/signalosome complex subunit 7a [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0025   18.3   0.3      0.016   15.7   0.1    2.4  2  PCI              PCI domain
  ------ inclusion threshold ------
      0.013   16.1   1.5        1.7    9.4   0.2    2.4  2  Acp26Ab          Drosophila accessory gland-specific peptide 
       0.11   12.1   0.0       0.15   11.6   0.0    1.1  1  ABC2_membrane_5  ABC-2 family transporter protein


Domain annotation for each model (and alignments):
>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.1   2.7e-06     0.016      57     104 ..      75     130 ..      33     131 .. 0.86
   2 ?   -1.3   0.0      0.54   3.2e+03      31      31 ..     161     161 ..     135     195 .. 0.48

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 2.7e-06
                 CESEEEHHHHHHHHTSSH........HHHHHHHHHHHHTTSSSEEEETTTTEEEEC CS
         PCI  57 iyssislerlaklldlsv........devEkilvklIrdgeirakidqesgivvfk 104
                   ssis+++l k+l+l++          +E++l++++ ++ + +k++++s++++++
  EPX72833.1  75 TGSSISYDDLWKQLKLNDslpptekdIILEQYLIQAMIKQILVGKLNSQSRTLHVS 130
                 5689*******************987779************************997 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.54
                 H CS
         PCI  31 a 31 
                  
  EPX72833.1 161 S 161
                 1 PP

>> Acp26Ab  Drosophila accessory gland-specific peptide 26Ab (Acp26Ab)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.1    0.0031        19      27      58 ..      24      54 ..      13      72 .. 0.76
   2 ?    9.4   0.2   0.00028       1.7      29      75 ..     120     166 ..     101     183 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0031
     Acp26Ab 27 vqsssqsrsqkvmngmlrtlydysvqdsvnda 58
                 q+s  s s  v   +l ++y+ svqds  d 
  EPX72833.1 24 CQASQGSVSPTV-YQLLNAFYQGSVQDSSADW 54
                566666666555.569999********99885 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00028
     Acp26Ab  29 sssqsrsqkvmngmlrtlydysvqdsvndatghliqthkadfnsdvm 75 
                   sqsr+ +v   m r + d  +q+  +  +  + +  ka  nsdv 
  EPX72833.1 120 LNSQSRTLHVSWAMERNMNDARIQEMKDTLSKFVQRCSKAFSNSDVK 166
                 579*********************97666666666778888899995 PP

>> ABC2_membrane_5  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   2.5e-05      0.15      54      89 ..      77     112 ..      70     118 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2.5e-05
  ABC2_membrane_5  54 ttlsyDekskwnkylltLPvtrkeiVksKYlfvlil 89 
                      +++syD+  k  k+  +LP t k+i+ ++Yl+ +++
       EPX72833.1  77 SSISYDDLWKQLKLNDSLPPTEKDIILEQYLIQAMI 112
                      799****************************99887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       993  (0.0553851); expected 358.6 (0.02)
Passed bias filter:                      604  (0.0336884); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 1474.09
//
Query:       EPX72834.1  [L=835]
Description: urease Ure2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.7e-67  227.5   0.1    4.4e-67  226.8   0.1    1.3  1  Amidohydro_1  Amidohydrolase family
    6.7e-54  181.4   4.4    1.4e-53  180.4   4.4    1.5  1  Urease_alpha  Urease alpha-subunit, N-terminal domain
    3.8e-39  132.6   0.0    7.8e-39  131.7   0.0    1.5  1  Urease_beta   Urease beta subunit
    7.1e-37  125.7   0.0    1.6e-36  124.6   0.0    1.7  1  Urease_gamma  Urease, gamma subunit
      2e-07   30.9   0.2    0.00012   21.7   0.0    2.7  3  Amidohydro_3  Amidohydrolase family


Domain annotation for each model (and alignments):
>> Amidohydro_1  Amidohydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  226.8   0.1   1.2e-70   4.4e-67       1     333 [.     395     723 ..     395     739 .. 0.95

  Alignments for each domain:
  == domain 1  score: 226.8 bits;  conditional E-value: 1.2e-70
                   EEEE-EEEEEEECETTECSSSGHHHHHSTTHHHHHHHHHHHHHHHHTTEEEEEEEEHSSTH....HHHHHHHHHHTSSSEEEEEEESSEGGSGCCCS CS
  Amidohydro_1   1 ivlPGlIDaHvHleqsllrgatledwlvppetaaealesgiktalksGtttvadmgattst....giealleaaeelplglrilggkvsldrgsaet 93 
                   iv+ G+ D+HvH+              ++p++++eal+sgi+t+ ++Gt++  +++att+t     ++ +++a++++p+++++ g+      g+++ 
    EPX72834.1 395 IVTFGGMDSHVHF--------------ICPQQIEEALASGITTMYGGGTGPSTGSNATTCTpnadLVKSMFRATDSYPMNIGLTGK------GNDSG 471
                   6788*********..............***********************************************************......***** PP

                   HHHHHHHHHHHHHHHHHHCTTTCEEEEEEECGTCCSHHHHHHHHHHHHHHHTTEEEEEE..TSSCHHHHHHHHHHTTTEEEETTTTSTCCHHTTTHC CS
  Amidohydro_1  94 skasreklkagaaetikgkadgvvkvalapheapafsdeelkealkeakkrdlpvaiHa..letkgevedaeaafgetiehgthlevaeslglldei 188
                      +r +++ag+             ++++ he+++ ++++++ +l ++++ d++  iH+  l+++ +ve + +af+++++h++h+e+a++++++d+i
    EPX72834.1 472 YSSLRSQIEAGC-------------SGMKLHEDWGSTPAAIDSCLTVCDEFDVQCLIHTdtLNESSFVEGTFKAFKDRTIHTYHVEGAGGGHAPDII 555
                   ***********9.............************************************************************************ PP

                   CEEEHCTCEEE...HH...HHHHHHHHHHHHCEE.........HHHHHHHHSEHHHHHHHHHHHH.TSCEEEEEECTTSSCCGGHHHH...HHHHHH CS
  Amidohydro_1 189 klilahgvhlt...pt...eaellkerlkeagva.........hcpfsnsilrsgrealrkalde.GvkvglgtDgaasgnslnllee...lrlalk 266
                    l+   +++++   pt   + ++l+e l++ +v+         +++f++s++r +++a++++l++ G+++++++D++a+g++++++ +   ++++ k
    EPX72834.1 556 SLVQNPNILPSstnPTrpyTKNTLDEELDMLMVChhlsrnvpeDVAFAESRIRAETIAAEDVLQDlGAISMISSDSQAMGRCGEVISRtwkTAHKNK 652
                   ***********76655999****************************************************************************** PP

                   HHHHCCTT...TTHCHCHHHHHHHHHTHHHHHHTT-TTTSSSS-TTSB--EEEECC.CTCGGGTTTCTSEE CS
  Amidohydro_1 267 lqrgllye...deegglslkealrmaTingAkalglddkvGsievGkdADlvvvdl.dilaafvglkkdgn 333
                   lqrg+l e    +++++++k++++++Tin+A ++g+++ vGs+evGk ADlv++d  d  a    + k g 
    EPX72834.1 653 LQRGCLPEddgTGADNFRVKRYVAKYTINPAVSHGISHIVGSVEVGKFADLVLWDFaDFGARPSTVLKGGM 723
                   *********998899***************************************87654444444444444 PP

>> Urease_alpha  Urease alpha-subunit, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  180.4   4.4   3.8e-57   1.4e-53       2     121 .]     270     389 ..     269     389 .. 0.99

  Alignments for each domain:
  == domain 1  score: 180.4 bits;  conditional E-value: 3.8e-57
  Urease_alpha   2 klsreeyaelyGptvgDrvrLadtellievekDltvyGeevkfGggkviRdgmgqssaakeeealDlvitnavilDatgivkadigikdgrivaiGk 98 
                   ++ r+ ya++yGpt+ D+vrL+dt+l+i+vekDlt+yG+e++fGggkviRdg gq++ ++ +++lD+vitna+i+D+tgi+kadigik+g i++iGk
    EPX72834.1 270 RIPRKMYATMYGPTTNDKVRLGDTSLVIRVEKDLTEYGNEAVFGGGKVIRDGTGQATGRSMNDCLDVVITNALIVDYTGIYKADIGIKNGFIAGIGK 366
                   689********************************************************************************************** PP

  Urease_alpha  99 agnpdvmdgvdeelvigastevi 121
                   +gnpd+md++ +++++g+st+vi
    EPX72834.1 367 SGNPDTMDNIADNMIVGSSTDVI 389
                   *********************98 PP

>> Urease_beta  Urease beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.7   0.0   2.2e-42   7.8e-39       1      97 [.     136     232 ..     136     233 .. 0.98

  Alignments for each domain:
  == domain 1  score: 131.7 bits;  conditional E-value: 2.2e-42
                  TT-EE-SSSEEETTTT---EEEEEEE-SSS-EEEETTS-GGGS-TTEES-HHHHTTEEE-SSTT-EEEE-TT-EEEEEEEE-STT-EE-STTSS--E CS
  Urease_beta   1 pgeiiteegeielnagretiklkvantgdrpiqvgshyhflevnkaLefdRekalGlrldipagtavrfepgeekevelvelaGerkvyGlnglvng 97 
                  pg + +eegeiel  + ++i+l+v+n gdrpiqvgshyhfle+n++L fdR+ka+G+rldip+gtavrfepg +k v+l++++G++ ++G n+l +g
   EPX72834.1 136 PGYVEVEEGEIELLPNLPRISLQVTNYGDRPIQVGSHYHFLETNEKLCFDRAKAYGKRLDIPSGTAVRFEPGVTKAVHLIPIGGKQVIQGGNSLSKG 232
                  789999**************************************************************************************99887 PP

>> Urease_gamma  Urease, gamma subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.6   0.0   4.5e-40   1.6e-36       4      99 .]       2      98 ..       1      98 [. 0.99

  Alignments for each domain:
  == domain 1  score: 124.6 bits;  conditional E-value: 4.5e-40
                  -HHHHHHHHHHHHHHHHHHHHHTT--B-HHHHHHHHHHHHHHHHHCT.S-HHHHHHHHCCSS-CCCB-TTCHHH-SEEEEEEEETTEEEEEEEES-S CS
  Urease_gamma  4 tpreldkLllfaaaelAqkrlarGlkLnhpEavaliasevlelardg.ksvaelmelgkklLtredvldgvaelleevqveatfpdgtkLvtvhdpi 99
                  +prel+kLll+++++lAqkrl rG+kLn+ Ea++lias+++e +rdg +svaelm+lgk++L++++v+++v++ll+e++veatfpdgt Lvt+hdpi
    EPX72834.1  2 QPRELHKLLLHQLGSLAQKRLCRGVKLNKLEATSLIASQIQEYVRDGtHSVAELMSLGKNMLGKRHVQPEVTHLLKELMVEATFPDGTYLVTIHDPI 98
                  79*********************************************999**********************************************9 PP

>> Amidohydro_3  Amidohydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.2   0.0       2.4   8.5e+03     122     140 ..     313     330 ..     302     338 .. 0.78
   2 !    6.4   0.0    0.0014       5.1       1      22 [.     387     408 ..     387     429 .. 0.87
   3 !   21.7   0.0   3.4e-08   0.00012     408     456 ..     669     717 ..     603     725 .. 0.84

  Alignments for each domain:
  == domain 1  score: -4.2 bits;  conditional E-value: 2.4
  Amidohydro_3 122 aggeilrdangegatgllr 140
                    gg+++rd++g+ atg + 
    EPX72834.1 313 GGGKVIRDGTGQ-ATGRSM 330
                   68999*****99.999876 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0014
  Amidohydro_3   1 eviDakGrlvlPGFvDsHtHla 22 
                   +vi a++++v+ G+ DsH H +
    EPX72834.1 387 DVISAENKIVTFGGMDSHVHFI 408
                   69******************76 PP

  == domain 3  score: 21.7 bits;  conditional E-value: 3.4e-08
  Amidohydro_3 408 lsleealalyTrgpAkalgledrkGtLevGadADlvvldadpldvdppe 456
                   + +   +a yT +pA   g ++  G++evG+ ADlv++d + + + p++
    EPX72834.1 669 FRVKRYVAKYTINPAVSHGISHIVGSVEVGKFADLVLWDFADFGARPST 717
                   6677789***************99***************7777666664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (835 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       412  (0.0229795); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.67u 0.29s 00:00:00.96 Elapsed: 00:00:00.46
# Mc/sec: 5421.02
//
Query:       EPX72835.1  [L=371]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (371 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       992  (0.0553294); expected 358.6 (0.02)
Passed bias filter:                      303  (0.0169); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.30s 00:00:00.80 Elapsed: 00:00:00.45
# Mc/sec: 2454.82
//
Query:       EPX72836.1  [L=521]
Description: acetyl-CoA hydrolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.3e-48  165.6   0.0    2.4e-48  164.8   0.0    1.4  1  AcetylCoA_hydro  Acetyl-CoA hydrolase/transferase N-terminal 
    1.8e-43  148.2   0.0    3.2e-43  147.3   0.0    1.5  1  AcetylCoA_hyd_C  Acetyl-CoA hydrolase/transferase C-terminal 
     0.0039   16.6   0.2       0.35   10.3   0.0    2.5  2  CoA_trans        Coenzyme A transferase


Domain annotation for each model (and alignments):
>> AcetylCoA_hydro  Acetyl-CoA hydrolase/transferase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.8   0.0     4e-52   2.4e-48       5     198 .]      14     229 ..      10     229 .. 0.96

  Alignments for each domain:
  == domain 1  score: 164.8 bits;  conditional E-value: 4e-52
  AcetylCoA_hydro   5 yekklke.peeaaelvkngshielsgftavgtakaipkylakrkvekenvkkkllidlavgavlsagPeeevleekdavlyrpapkqvgellrk 97 
                      ++kk+ + p  +++ +kng++i++sgft+vg +k ip++la ++v  +++++k++++l+vga+  a+  e +++e d++  r  p+qvg+++ k
       EPX72836.1  14 FAKKVVSdPASLIPHFKNGDYIGWSGFTGVGYPKMIPQALA-KHVAAKDLQGKMRFKLFVGASGGAD-TEGKWAELDMIERR-CPHQVGKPISK 104
                      67777776*********************************.99***********************.9***********99.*********** PP

  AcetylCoA_hydro  98 ainqglvsfvdkhlsevpqklekgfvp.......iDvalieataldedGylnlG..vg......vrakKviiEv.......aelvvivvkknpP 169
                       in+g+++f+dkhls++pq+l +g+++       +Dva++eata+ edG +++G  vg        a+KviiEv       ++l++iv   npP
       EPX72836.1 105 GINEGRINFFDKHLSMFPQDLLYGYYTrnrdrnsLDVAIVEATAITEDGGIVPGasVGatpelvQMAEKVIIEVntavpsfEGLHDIVDIPNPP 198
                      ******************************************************666699**977789*******************9999*** PP

  AcetylCoA_hydro 170 rvngydelialdkv..dyivvdpekvvavve 198
                       + +  + +++d++   yi vdp kv+ vve
       EPX72836.1 199 HRTPLAINRVDDRIgkPYIKVDPSKVIGVVE 229
                      ***************99**********9997 PP

>> AcetylCoA_hyd_C  Acetyl-CoA hydrolase/transferase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.3   0.0   5.4e-47   3.2e-43       1     153 [.     330     480 ..     330     481 .. 0.96

  Alignments for each domain:
  == domain 1  score: 147.3 bits;  conditional E-value: 5.4e-47
                      S-HHHHHHHTT.-TTEEE-BHHHHT-HHHHTTSTTEEEEEE-SEEETTS-EESSEC.TTCCTCGGTTHHHHHHHHHHSTT-EEEEE--SEETTT CS
  AcetylCoA_hyd_C   1 Gskklydflde.npkielrpveyvndpeviaqnkkvvsinsalevdltGqvnsesl.ggrvvsGvGgqldFvrgaalskggksiialpStakkg 92 
                      G +k+y+++d  +++i lrp+ ++n+pe+i++   ++++n+ +e+d+++++ns+++ g+r+++G+Gg+ dF+r+a++     si+++pSt++++
       EPX72836.1 330 GFEKFYANWDYyKDRILLRPQVISNHPEIIRR-LGCIAMNTPVEIDMYAHANSTNVlGSRMLNGLGGSADFLRNAKY-----SIMHTPSTRPSK 417
                      899*******98*******************9.********************************************.....*********976 PP

                      T....EESEESS-STTSSECE-TTT-SEEEETTEEEE-TT--HHHHHHHHHT.TS-HHHHHHHHHH CS
  AcetylCoA_hyd_C  93 e....iSrIvpslkegahvtttrhdvdyvvTEyGiadLrgkslreraealik.iAhpdfreeLlee 153
                      +    +S+Ivp+ +   hv++t+hd+d++vTE+G+ad+rg+s+rera+ +i+ +Ahpd+++ L ++
       EPX72836.1 418 KdptgVSCIVPMAT---HVDQTEHDLDIIVTEQGLADVRGLSPRERARVIINkCAHPDYKPILNDY 480
                      445569********...********************************************99876 PP

>> CoA_trans  Coenzyme A transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.0   5.8e-05      0.35      11      40 ..      28      56 ..      19      78 .. 0.79
   2 !    3.8   0.0    0.0053        32     149     208 ..     139     196 ..     136     198 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 5.8e-05
                T--TTEEEEE-SBTTBTHHHHHHHHHHHHT CS
   CoA_trans 11 eikdGmtvavGGFgligiPealiaalarsg 40
                ++k+G+++  +GF+++g P ++i + + + 
  EPX72836.1 28 HFKNGDYIGWSGFTGVGYP-KMIPQALAKH 56
                79*****************.6665544443 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.0053
                 EEEEEEECCEEETTCSEESSGGGHTTHSHHHHHHEEEEEEEEEEEECTTSSECCCESBTG CS
   CoA_trans 149 advalikaskadeegnlvfeksagnfnkpaiaeaakvtileveeivekgkldpekvliPg 208
                  dva+++a+   e+g +v   s+g + +++ +  a+ +i ev   v+  + +++ v+iP+
  EPX72836.1 139 LDVAIVEATAITEDGGIVPGASVGATPELVQM--AEKVIIEVNTAVPSFEGLHDIVDIPN 196
                 59*************************77744..89999******************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (521 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       333  (0.0185733); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 3660.07
//
Query:       EPX72837.1  [L=190]
Description: pyridoxamine 5'-phosphate oxidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.7e-11   43.5   0.0      7e-11   42.2   0.0    1.6  2  Putative_PNPOx  Pyridoxamine 5'-phosphate oxidase


Domain annotation for each model (and alignments):
>> Putative_PNPOx  Pyridoxamine 5'-phosphate oxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.2   0.0   3.9e-15     7e-11       5      74 ..      15      91 ..      11      94 .. 0.93
   2 ?   -2.0   0.0      0.24   4.3e+03      72      87 ..     114     129 ..      98     130 .. 0.74

  Alignments for each domain:
  == domain 1  score: 42.2 bits;  conditional E-value: 3.9e-15
                    HHHHHHHSSEEEEEEEETTSEEEEEEEEEEEETTT........TEEEEEEETTSHHHHHHHHH-EEEEEEEETTGSEE CS
  Putative_PNPOx  5 lreflaeskavvlATvdedGrPnvspvllkagdgr........dgivfatnadsrklrnleenprvallflddelgrg 74
                    ++  l +sk+  lAT+  d  P++s++++ + ++         d i++ t + s+k+ n+ +nprv+ll++d+ ++r+
      EPX72837.1 15 VKRCLGSSKYIQLATCFQDQ-PHSSLMTFTYVPAGqalpyeadDCIILTTGENSKKTFNISSNPRVSLLVHDWTTNRQ 91
                    56778899********6666.****************************************************98876 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.24
                     SEEEEEEEEEEEESCH CS
  Putative_PNPOx  72 grgvrieGtaelvsdg 87 
                      ++v+++G a+++ +g
      EPX72837.1 114 TTSVSLNGLATILPRG 129
                     5788999999888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       554  (0.0308997); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.45
# Mc/sec: 1266.63
//
Query:       EPX72838.1  [L=316]
Description: checkpoint clamp complex protein Rad1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-63  214.4   0.5    1.9e-63  214.2   0.5    1.1  1  Rad1      Repair protein Rad1/Rec1/Rad17


Domain annotation for each model (and alignments):
>> Rad1  Repair protein Rad1/Rec1/Rad17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  214.2   0.5     1e-67   1.9e-63       2     274 ..       2     263 ..       1     264 [. 0.98

  Alignments for each domain:
  == domain 1  score: 214.2 bits;  conditional E-value: 1e-67
        Rad1   2 fsAtlsnvseLatlLksiafkdkalvqissdGlkfivednrvlqaqafldkalFtsYtfenaqddedeedeeedsvsfevsLsallecLnifgkndsss 100
                 f+A++  v+++++ Lk++ f+++ +v+i+s G++f v+++++lqa++f+d+ lF++Y++        e+dee++   f+ +L  ll+cL+i ++ ++++
  EPX72838.1   2 FQAETVYVKHIHSTLKCVDFAKECTVEITSRGIRFGVDESQSLQAHVFIDRGLFQKYNY--------EDDEENSNYLFKTRLAPLLQCLSIYTDGKDKQ 92 
                 9**********************************************************........667789999*********************** PP

        Rad1 101 kessssraskvasssakatscklsYkgeGsPLvliLee.agvtttcelsTyepeedldleldrqevvlkvilkselLhsalteLdat.skklkilasse 197
                  ++ + ++++++  ++    ck+ ++g G+P+  + ee ag +t celsT+e ee++d+    + +  kvi++s +L++al eLd++ s++l i +ss 
  EPX72838.1  93 IANPWDQQPSTNTMHKRGVVCKIHFEGIGYPFEWEVEEmAGYSTICELSTLEYEENIDVSRLATTLNTKVIMRSGWLYDALLELDNNlSESLMIETSS- 190
                 ***********************************************************999*****************************9999999. PP

        Rad1 198 kkapvfalsakgelgssevefpneksvlekfevsslsessessYkfallkkaakalalssKvslrmdeaGlLslqfm 274
                  ++ +f l+  g ++ +e+e+pnek+vle+fe +  se +++ Y+fal+++a kal++ +Kvslr+de+G+L +q+m
  EPX72838.1 191 -QKSTFLLRCVGGMSTTEMEYPNEKNVLESFETN--SEYTYT-YRFALIRQAIKALQAGTKVSLRIDENGTLNIQLM 263
                 .689******************************..999999.*********************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (316 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       577  (0.0321825); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 2451.47
//
Query:       EPX72839.1  [L=563]
Description: DUF1716 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.2e-34  116.5   0.2    1.6e-33  115.0   0.2    1.9  1  CTNNBL    Catenin-beta-like, Arm-motif containing nuclear
  ------ inclusion threshold ------
      0.028   14.4   3.1        5.1    7.0   0.0    3.3  3  DUF3361   Domain of unknown function (DUF3361)


Domain annotation for each model (and alignments):
>> CTNNBL  Catenin-beta-like, Arm-motif containing nuclear
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.0   0.2   1.8e-37   1.6e-33       2     104 .]      66     168 ..      65     168 .. 0.98

  Alignments for each domain:
  == domain 1  score: 115.0 bits;  conditional E-value: 1.8e-37
      CTNNBL   2 eilelldeeeeeeeeekldeaalkklllklekkvkknqelRikyeddpekfmeSEadLdeeikelsvlaeapelYpelvelgavesLvgLlsHeNtDia 100
                 e l++ld++e +e + +l+ ++lkk ++klek +++nqelR+ky+++pekf+eSEadLdeei+++++++e+p+l+p++++lg+v+++++Ll+HeN+Di+
  EPX72839.1  66 ESLQFLDQNEGTEPSVALTPNELKKKVVKLEKVLNQNQELRSKYPESPEKFIESEADLDEEIRSFNIISEYPSLFPLFIKLGCVTTFLELLTHENADIM 164
                 6799********99************************************************************************************* PP

      CTNNBL 101 iavv 104
                 i vv
  EPX72839.1 165 ITVV 168
                 *997 PP

>> DUF3361  Domain of unknown function (DUF3361)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.5    0.0013        12      65     135 ..     211     285 ..     143     299 .. 0.78
   2 ?   -1.1   0.0      0.17   1.6e+03       5      22 ..     334     351 ..     332     364 .. 0.73
   3 ?    7.0   0.0   0.00057       5.1       3      40 ..     375     411 ..     373     462 .. 0.93

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0013
     DUF3361  65 saadasilqrslaiLesivlnsselyelvekevt.lesLiehLqssnqeiq...tnalaLlnALllkaddskrke 135
                 ++ad++ + + l+  e+++  +se +++v+++   l+ L++++++s++ i+   ++++ Ll  +l ++++++++ 
  EPX72839.1 211 NEADKHGVYSILSLFENLISIDSEVCSTVARKTDlLQWLLQRISVSETYISpnlQYSVELLAIFLSHSQEARKSV 285
                 367778888899********************996799*******999986333667888866666666555544 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.17
     DUF3361   5 eFisrdGlkllvkiveeg 22 
                  F++++G++ll+   +++
  EPX72839.1 334 SFMKEEGIELLILNMKNK 351
                 69*******998665554 PP

  == domain 3  score: 7.0 bits;  conditional E-value: 0.00057
     DUF3361   3 AqeFisrdGlkllvkiveegkesgeilayaLtafleLm 40 
                 +q F++ +Glk++++   ++ +s e++ ++L  f +L 
  EPX72839.1 375 CQRFVEAGGLKYIFSTFMKS-QSSETIDHILAIFCSLF 411
                 789**************997.8899*******999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (563 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       846  (0.0471861); expected 358.6 (0.02)
Passed bias filter:                      484  (0.0269954); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.28s 00:00:00.88 Elapsed: 00:00:00.45
# Mc/sec: 3737.46
//
Query:       EPX72840.1  [L=426]
Description: SAGA complex histone acetyltransferase subunit Gcn5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      1e-25   89.6   1.1      1e-25   89.6   1.1    2.1  2  Bromodomain      Bromodomain
    1.5e-09   38.1   0.0    3.2e-09   37.0   0.0    1.6  1  Acetyltransf_1   Acetyltransferase (GNAT) family
    4.2e-07   30.0   0.0    7.2e-07   29.2   0.0    1.4  1  Acetyltransf_10  Acetyltransferase (GNAT) domain
    2.6e-05   24.5   0.2      5e-05   23.7   0.2    1.4  1  Acetyltransf_7   Acetyltransferase (GNAT) domain


Domain annotation for each model (and alignments):
>> Bromodomain  Bromodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.1      0.93   4.2e+03      13      47 ..     110     146 ..     102     148 .. 0.64
   2 !   89.6   1.1   2.3e-29     1e-25       3      83 ..     326     406 ..     324     407 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.93
                  CGGGGCSTT-GCCSTTHHHH...SS---HHHHHHHHH CS
  Bromodomain  13 laepFlepvdpeefpdyyavi..kkPldLstIkkkle 47 
                  l  +F++ +++   +  ++ i  ++ l+++ +k++l+
   EPX72840.1 110 LKNIFMKQLPKMPKEYITRLIydRNHLSMTIVKDNLH 146
                  5667777764444444444555577788888888875 PP

  == domain 2  score: 89.6 bits;  conditional E-value: 2.3e-29
                  HHHHHBHTTTCGGGGCSTT-GCCSTTHHHH.SS---HHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHSHTTSHHHHHHH CS
  Bromodomain   3 kilsellehklaepFlepvdpeefpdyyavikkPldLstIkkklesnkYksladfeadlkllfsNarkyngegsviyelae 83 
                   +++e+ +h+++ pF +pv++e +pdyy+vi++P+dLst++ +l++n+Y+s+++f  d+kl+f+N+r yn + + +y+ a+
   EPX72840.1 326 MLFTEMQNHPSSWPFAQPVNREDVPDYYEVIEHPVDLSTMEYRLRNNQYESVEEFIRDAKLIFNNCRQYNDPSTTYYKNAD 406
                  57889*************************************************************************986 PP

>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.0   0.0   7.2e-13   3.2e-09      24     117 .]     128     216 ..     108     216 .. 0.79

  Alignments for each domain:
  == domain 1  score: 37.0 bits;  conditional E-value: 7.2e-13
                     HHHHHHSTTCEEEE..EEETTEEEEEEEEEEEETTSTTEEEEEEEEESGGGTTSSHHHHHHHHHHHHHHHT.TESEEEEEEETTEHHHHHHHHHT CS
  Acetyltransf_1  24 feesfsleaegllv..aeedgeliGfisllkipdekggvayieslaVspeyrgkGlGsaLlealeeraree.gikkivlaveedndaairlYekl 115
                     + ++   + ++l +  ++++  ++G i++++  +  ++ a+i ++a++++ + +G+Gs+L+++l +++r    i+  +l + +dn  ai++++k 
      EPX72840.1 128 RLIY---DRNHLSMtiVKDNLHVVGGITYRPFEQ--REFAEIVFCAIASTEQVRGYGSHLMNHLKDYVRGTsKIQH-FL-TYADN-YAIGYFKKQ 214
                     4555...333333333678888*****9999999..9**********************************55566.66.76777.******88* PP

                     TE CS
  Acetyltransf_1 116 GF 117
                     GF
      EPX72840.1 215 GF 216
                     *9 PP

>> Acetyltransf_10  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.2   0.0   1.6e-10   7.2e-07      17     109 ..     121     219 ..      95     231 .. 0.82

  Alignments for each domain:
  == domain 1  score: 29.2 bits;  conditional E-value: 1.6e-10
  Acetyltransf_10  17 ispealreri.eegealllvaeeggkivGvielrdgs.....hisllfVdpeyrgqGigkaLleaveeeaekdgikl.eltvnaspyavpfYek 103
                      + +e +++ i + ++  + +++++  +vG i++r  +     +i  +++++  + +G+g+ L++++++++ +  +k+ ++   a++ya+++++k
       EPX72840.1 121 MPKEYITRLIyDRNHLSMTIVKDNLHVVGGITYRPFEqrefaEIVFCAIASTEQVRGYGSHLMNHLKDYV-RGTSKIqHFLTYADNYAIGYFKK 213
                      344778888878999999999**********66444445678***************************9.5667778**************** PP

  Acetyltransf_10 104 lGFkav 109
                      +GF++ 
       EPX72840.1 214 QGFTQE 219
                      ***975 PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.2   1.1e-08     5e-05       7      75 ..     140     217 ..     130     218 .. 0.74

  Alignments for each domain:
  == domain 1  score: 23.7 bits;  conditional E-value: 1.1e-08
                     EEEETTEEEEEEEEEEES....TCTEEEEE-GGGTTSSHHHHHHHHTT...SEEEEE.EEEE..THHHHHHHHHHTTEE CS
  Acetyltransf_7   7 VaeddgkivGfialslld....aeitrlaVdpeyrgkGiGraLleaae...kgiile.qlel..naekaikfYeklGFe 75 
                     +++d+  +vG i + + +    aei + a++   + +G+G+ L+++ +   +g + + q  l  ++++ai++++k GF+
      EPX72840.1 140 IVKDNLHVVGGITYRPFEqrefAEIVFCAIASTEQVRGYGSHLMNHLKdyvRG-TSKiQHFLtyADNYAIGYFKKQGFT 217
                     56777778999999998888777777799****************83345645.21222233333349**********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (426 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       757  (0.0422221); expected 358.6 (0.02)
Passed bias filter:                      542  (0.0302304); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 3051.53
//
Query:       EPX72841.1  [L=140]
Description: hypothetical protein SOCG_00603 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.24   12.3   3.7         20    6.4   1.2    2.5  2  zf-C2H2_4  C2H2-type zinc finger


Domain annotation for each model (and alignments):
>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   1.2    0.0011        20       6      22 ..      28      44 ..      26      46 .. 0.85
   2 ?    6.0   0.0    0.0015        26       2      16 ..      62      76 ..      61      78 .. 0.85

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0011
   zf-C2H2_4  6 CgksFsskkaLlrHlkt 22
                C++ F+ + +++rH+kt
  EPX72841.1 28 CPRCFNKSVRVCRHWKT 44
                8888999999999**98 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.0015
   zf-C2H2_4  2 kCpiCgksFsskkaL 16
                +C++Cg + +++k+L
  EPX72841.1 62 RCSVCGWWERTNKHL 76
                7****9999888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       512  (0.0285571); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.28s 00:00:00.69 Elapsed: 00:00:00.44
# Mc/sec: 964.69
//
Query:       EPX72842.1  [L=300]
Description: OTU family cysteine protease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.7e-31  107.9   0.3    4.7e-31  107.9   0.3    2.1  2  OTU            OTU-like cysteine protease
    2.1e-09   37.2   1.5      1e-08   35.0   0.0    2.6  2  Peptidase_C65  Peptidase C65 Otubain
  ------ inclusion threshold ------
       0.23   11.4   0.1       0.23   11.4   0.1    1.9  2  OAR            OAR domain
        1.7    7.4   9.7        2.1    7.1   9.7    1.1  1  LMBR1          LMBR1-like membrane protein
        7.8    5.1   8.3        9.4    4.8   8.3    1.1  1  Ndc1_Nup       Nucleoporin protein Ndc1-Nup


Domain annotation for each model (and alignments):
>> OTU  OTU-like cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.5      0.56     2e+03      24      53 ..      17      46 ..       2      88 .. 0.66
   2 !  107.9   0.3   1.3e-34   4.7e-31       1     127 []     167     292 ..     167     292 .. 0.94

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.56
                HHHHHHHHHCHHHHHHTSSHHCCHHHHCCH CS
         OTU 24 kakvseLreklaeylrehseelelfleeee 53
                + +  +Lr + +e  ++++++++  + ++e
  EPX72842.1 17 QTSIATLRRQAKEGNKKQKKQVQQKIADME 46
                334457777776666666666655555553 PP

  == domain 2  score: 107.9 bits;  conditional E-value: 1.3e-34
                 --SS-HHHHHHHHCCCSS.SHCCHHHHHHHHHCHHHHHHTSSHHCCHHHHCCHHH.......HHHHTTSTTHHHHHHHHHHHHHHCTS-EEEETTSSSS CS
         OTU   1 rgDGnCLlravsqqlwgvsdelrkakvseLreklaeylrehseelelfleeeeeg.......ylkeiektaawggeleifalahiLrrpIiVlksesge 92 
                 ++DG+CL++++s+ql +++  ++k ++++Lr+  a+y+++h +e++ fl +e +g       y++ei+ t++wgg++ei+ala+ L++pI+V++++++ 
  EPX72842.1 167 TPDGHCLFASISHQLNYHF--NIKLNYQQLRDHAANYIHKHGDEYSGFLLDEDTGevmsveqYCNEIRRTGKWGGDIEIQALANDLQVPIHVYNTDGPV 263
                 59*************9888..99999*************************98889************************************9999999 PP

                 EEEE-TT-EEE--TTS-GGGS-SS-EEEEEETTEE CS
         OTU  93 elvglkfegvylplekdkslclkypihlyylgeHy 127
                  +++ ++++         ++c++y++hly+lg+Hy
  EPX72842.1 264 IKFEPQEAK------HTTPVCIAYYQHLYGLGAHY 292
                 666655555......99*****************9 PP

>> Peptidase_C65  Peptidase C65 Otubain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.6      0.27   9.7e+02      75     105 ..      15      39 ..       1      95 [. 0.47
   2 !   35.0   0.0   2.8e-12     1e-08      92     210 ..     143     269 ..     113     285 .. 0.70

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.27
                    HHHHHHHHHHHHHHHTT--HHHHHHHHHHHH CS
  Peptidase_C65  75 rikerveklkealeslgfdeevvedfleafl 105
                    ++ ++++ l+++ ++   +        +++ 
     EPX72842.1  15 QLQTSIATLRRQAKEGNKK------QKKQVQ 39 
                    4444444433333311111......111111 PP

  == domain 2  score: 35.0 bits;  conditional E-value: 2.8e-12
                    --HHHHHHHHHHHHHHHHHHHTTSS-HH.....HHHHHHTSHHHHHHHHHHHHHHHHHHHHHTHHHHGGGS-TT.....--HHHHHHHHTSSTT-- CS
  Peptidase_C65  92 fdeevvedfleaflellkkiekkteeseeka.eellkafneqeesdyivvflRlltsaelkthadeyepFldel.....stveeFceqevepvnkE 181
                     +++v +d l+++l+    ++ + + + +    ++ +++n + + +   + lR  + +++ +h dey++Fl ++     ++ve++c+ e+++++k 
     EPX72842.1 143 DKQKVEKDKLSKILSDSGLVAVDITPDGHCLfASISHQLNYHFNIKLNYQQLRDHAANYIHKHGDEYSGFLLDEdtgevMSVEQYCN-EIRRTGKW 237
                    445555566666666666666555544444456666777766666666777888899**************999999*********6.78****** PP

                    B-HHHHHHHHHHTT--EEEEESSSS...GBST CS
  Peptidase_C65 182 aDnvqitaLaealgvkvrVeyldrs...vege 210
                       ++i+aLa+ l+v+++V++ d      e++
     EPX72842.1 238 GGDIEIQALANDLQVPIHVYNTDGPvikFEPQ 269
                    **********************9544433333 PP

>> OAR  OAR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   6.4e-05      0.23       5      16 ..      18      29 ..      17      29 .. 0.96
   2 ?   -4.5   1.2         5   1.8e+04      11      14 ..     122     125 ..     122     125 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 6.4e-05
         OAR  5 SSIAsLRlKAKE 16
                +SIA LR+ AKE
  EPX72842.1 18 TSIATLRRQAKE 29
                8**********9 PP

  == domain 2  score: -4.5 bits;  conditional E-value: 5
         OAR  11 RlKA 14 
                 R+KA
  EPX72842.1 122 RRKA 125
                 9**9 PP

>> LMBR1  LMBR1-like membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   9.7    0.0006       2.1     197     313 ..       8     153 ..       2     186 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0006
       LMBR1 197 dldeelkklyfeaaklntekeeaerele.dllkevkklrksisesd...................plrkyleeilk...........kvPeeiaeklks 264
                 +  ee+k+l++++a+l+ + +e +++ + ++ ++++ ++  +s+ +                      + ++++lk           k+Pe+++++ ++
  EPX72842.1   8 KQREEYKQLQTSIATLRRQAKEGNKKQKkQVQQKIADMEADLSQRHahermdlerteepqegndqD--DLVTTLLKqmestsldkpkKSPENLKDEPAE 104
                 566799**********98777765555515555566666666666677777777777777664330..4444444477777777999*********999 PP

       LMBR1 265 nenkteeslaklekqlikalqkrertekqwkrllekalelediiknkss 313
                 + ++t+++ ++ +++l ++ ++ ++ ++q ++     ++ +++ k+k s
  EPX72842.1 105 QPKETKKPRNRQKERLERRKAELQQLSAQAEKEHAGTVDKQKVEKDKLS 153
                 9999999999999999999999999999988887777666677766655 PP

>> Ndc1_Nup  Nucleoporin protein Ndc1-Nup
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   8.3    0.0026       9.4     358     477 ..      36     158 ..      10     208 .. 0.50

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0026
    Ndc1_Nup 358 pkaaps......kapknkasapvkelprlsksplkkk...ddeifgn.....sltaeaspkssssskegvekalsslakspgqspsptarlsprarkll 442
                 ++ + +       +++++ + +  +l r+    + ++   +d+++++     +   ++s  ++++s+e++++   ++a++p+++++p +r  +++r + 
  EPX72842.1  36 KQVQ-QkiadmeADLSQRHAHERMDLERTE---EPQEgndQDDLVTTllkqmE---STSLDKPKKSPENLKD---EPAEQPKETKKPRNR--QKERLER 122
                 2222.2455444334444444444444443...33334456777776653332...2222223233344444...555565555445554..3344444 PP

    Ndc1_Nup 443 ekaksrllskeqkealsestikkkvekelaq.llks 477
                 +ka+ ++ls++++++   +  k+kvek  +  +l++
  EPX72842.1 123 RKAELQQLSAQAEKEHAGTVDKQKVEKDKLSkILSD 158
                 445555555444443333333444333333335553 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (300 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2795  (0.155893); expected 358.6 (0.02)
Passed bias filter:                      810  (0.0451782); expected 358.6 (0.02)
Passed Vit filter:                       122  (0.00680462); expected 17.9 (0.001)
Passed Fwd filter:                        28  (0.00156172); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.74u 0.33s 00:00:01.07 Elapsed: 00:00:00.49
# Mc/sec: 1832.99
//
Query:       EPX72843.1  [L=202]
Description: ribosome biogenesis protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.041   13.8   0.3       0.19   11.7   0.1    2.3  2  G-patch         G-patch domain
       0.22   11.4  29.3       0.29   11.0  29.3    1.1  1  SRP-alpha_N     Signal recognition particle, alpha subunit, N
       0.45    8.8  20.4       0.54    8.5  20.4    1.1  1  CDC45           CDC45-like protein
       0.82    9.8   0.1       0.82    9.8   0.1    3.4  2  G-patch_2       G-patch domain
        2.1    7.1  20.9        2.5    6.8  20.9    1.2  1  Apt1            Golgi-body localisation protein domain
        4.4    6.2  19.7        5.1    6.0  19.7    1.1  1  SLC12           Solute carrier family 12
          6    6.2  18.7         33    3.8  18.1    2.0  2  SelP_N          Selenoprotein P, N terminal region
        6.8    6.4  21.5        9.5    6.0  21.5    1.3  1  RR_TM4-6        Ryanodine Receptor TM 4-6
        7.8    5.8  25.7         11    5.2  25.7    1.3  1  U79_P34         HSV U79 / HCMV P34
          8    4.4  17.3        8.3    4.4  17.3    1.1  1  Hid1            High-temperature-induced dauer-formation prot


Domain annotation for each model (and alignments):
>> G-patch  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1    0.0001      0.19       9      45 .]       8      42 ..       4      42 .. 0.94
   2 ?   -3.3   0.0       4.9   8.8e+03      29      39 ..      59      69 ..      57      71 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.0001
     G-patch  9 LqkmGWkpGqGLGkkeqGiaePieakikkdraGlGak 45
                L + GW +G  L  ke G   P+ + +k+d +GlG+k
  EPX72843.1  8 LNSFGWQEGNAL--KEGGLLKPVLTSRKYDTRGLGTK 42
                8899*******9..*********************86 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 4.9
     G-patch 29 ePieakikkdr 39
                ++i++k ++++
  EPX72843.1 59 NSIQVKLETQG 69
                78999988776 PP

>> SRP-alpha_N  Signal recognition particle, alpha subunit, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0  29.3   0.00016      0.29      82     237 ..      42     187 ..      26     200 .. 0.44

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00016
                  ----TT...HHHHHHHHHHHHXXXXXXXXX........XXX..XXXXXXXXXX.....XX.XX.............XX....XXXXX...XXXXXXXX CS
  SRP-alpha_N  82 lvecaksy.FdeyFdqllrelEasaeaakkskaakepkamksfeeskkskktvksskedkkpe..gkkkkgakkekda....sddstpsatpetsrps 172
                  + ++a+   +d++F+ +l+++  + e + +s + +    m ++ ++ ++ +tv       ++   ++k+k++ k++ +    + ++ +++t+++sr+ 
   EPX72843.1  42 KHDYAD-QwWDNVFSSQLNSIQVKLETQGTSTKLA----MAKYHSKYSALSTVFRYAGCLSGTieEQKEKENMKNDANavaeKPKKVKHSTKKSSRK- 133
                  344444.25*********99999988776665554....4444444444444333222222223333333333322223432122222222222222. PP

                  XXXXXXXXX.XXX.XXXXXXXXXXXXXX..XXXXXXXXXXX....XXXXXXX..XXXXXXXXXXX CS
  SRP-alpha_N 173 tpsglltakeagptaedvsrrarkkankkrssagassgdeakasksskkkkkkpkkkgkkaRvWd 237
                       ++++++ +++++  +r+rk ++++ ss+++++++++++++++kk+       +k  R+  
   EPX72843.1 134 ----AKSESDRHKSKDKKHKRKRKDLDESTSSKKRKKEKSSHSKSDRKKE-------KKSSRKSK 187
                  ....3444445555677777777777754332222222222211111111.......11122222 PP

>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5  20.4    0.0003      0.54     110     193 ..     103     186 ..      50     201 .. 0.41

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0003
       CDC45 110 gdieeeleeereayealeeeeesdeedeeeeeeddddeeeeeeeeedeedeeedeeeskkkrksksdeeeesddddersrkrrr 193
                 ++ +e+++++ +a+ +  ++ + + ++++++ ++++d ++++++++++++++ de++s+kkrk++++++++sd+++e++++r+ 
  EPX72843.1 103 QKEKENMKNDANAVAEKPKKVKHSTKKSSRKAKSESDRHKSKDKKHKRKRKDLDESTSSKKRKKEKSSHSKSDRKKEKKSSRKS 186
                 222233333333333222222222222222222222222222222222222222222223333222222222222222222222 PP

>> G-patch_2  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.1   0.00045      0.82      24      59 ..      10      43 ..       7      45 .. 0.85
   2 ?  -12.1  14.2        10   1.8e+04      44      44 ..     159     159 ..     101     200 .. 0.66

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00045
   G-patch_2 24 GMGWkegqgigknkkgrvkpeepkrRpgrlGLGakp 59
                  GW+eg++ ++   g  kp+   r+ ++ GLG+k 
  EPX72843.1 10 SFGWQEGNALKEG--GLLKPVLTSRKYDTRGLGTKH 43
                57*******9999..5788999999999*****996 PP

  == domain 2  score: -12.1 bits;  conditional E-value: 10
   G-patch_2  44 e 44 
                  
  EPX72843.1 159 T 159
                 0 PP

>> Apt1  Golgi-body localisation protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8  20.9    0.0014       2.5     303     408 ..     105     197 ..      46     201 .. 0.49

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0014
        Apt1 303 aqeasmvkessseeddesdeesessssss.ssssssassssssssrssslelrlkptsstssssssessssssskkrsseesslessaserv.kssr.. 397
                 ++e+                 +++ ++ + ++ ++ ++s+++ss++++s+++r k+++++++ +++++++s+sskkr++e+ss ++s +++  kssr  
  EPX72843.1 105 EKEN----------------MKNDANA-VaEKPKKVKHSTKKSSRKAKSESDRHKSKDKKHKRKRKDLDESTSSKKRKKEKSSHSKSDRKKEkKSSRks 186
                 1111................1111111.12333333333333333333333333333333333444444444444443333333222222222111122 PP

        Apt1 398 asddleemksR 408
                 +++d e  k+R
  EPX72843.1 187 KGKDSETFKKR 197
                 45555555554 PP

>> SLC12  Solute carrier family 12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0  19.7    0.0028       5.1     130     218 ..     100     192 ..      74     202 .] 0.33

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0028
       SLC12 130 lqeeeeeeeekekkeaeese....keeeekkkakkkklle..ekskekeekekleekdsnlslseekkeeekekkkekk.kkkekkeklkkkeksl 218
                 ++e++e+e+ k++++a +++    k   +++k++++k+++  +++k+k++k+k ++kd ++s+s++k+++ek+++++++ kk++k+++++k ++s 
  EPX72843.1 100 IEEQKEKENMKNDANAVAEKpkkvK---HSTKKSSRKAKSesDRHKSKDKKHKRKRKDLDESTSSKKRKKEKSSHSKSDrKKEKKSSRKSKGKDSE 192
                 3333333322222222222222221...11111111111111222222233333333333333222222222222222202222222222222222 PP

>> SelP_N  Selenoprotein P, N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.16   2.8e+02      42      60 ..      53      71 ..      46      80 .. 0.85
   2 ?    3.8  18.1     0.018        33     143     227 ..      88     172 ..      73     181 .. 0.71

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.16
      SelP_N 42 lkasrledLRvkLekeGla 60
                + +s+l+++ vkLe +G++
  EPX72843.1 53 VFSSQLNSIQVKLETQGTS 71
                56789************86 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.018
      SelP_N 143 atyceekCGnCslesseaeeeckevtkaaeekpaeaeektehehahshkqghkhhekhghhHkekeelsesqqeepeeeekpaks 227
                 +++    C   ++e+++++e  k+ ++a +ekp++ +++t++++ + ++++ +h++k ++h +++++l es+++++ ++ek ++s
  EPX72843.1  88 TVFRYAGCLSGTIEEQKEKENMKNDANAVAEKPKKVKHSTKKSSRKAKSESDRHKSKDKKHKRKRKDLDESTSSKKRKKEKSSHS 172
                 5555666777788888888888888889999999998888888888777888888877777777777777777765555444432 PP

>> RR_TM4-6  Ryanodine Receptor TM 4-6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0  21.5    0.0053       9.5      83     164 ..     110     194 ..      54     201 .. 0.43

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0053
                 X......XXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXX..........XXXXXXXXXXXXXXXXXXXXXXXXX-H CS
    RR_TM4-6  83 t......pelkkklaeeeeaeeekeeeeepeaeaeekadaengekeekekekeeeekeseeeeeekkkkkkakskkkeeaeaeesell 164
                 +      +e+ kk++    + ++ +++ ++e+++++++d++++ k++   e+++++k+++e++ ++k  +k+++k++ +++ + se++
  EPX72843.1 110 KndanavAEKPKKVK---HSTKKSSRKAKSESDRHKSKDKKHKRKRKDLDESTSSKKRKKEKSSHSKSDRKKEKKSSRKSKGKDSETF 194
                 122221111122221...1111111222222222222222222222222222222233333333333333333333333333333333 PP

>> U79_P34  HSV U79 / HCMV P34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2  25.7    0.0064        11     127     209 ..     105     189 ..      83     201 .. 0.78

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.0064
     U79_P34 127 kehelknlGdsk..cveklekegraldrkkaddeqrkrsgkqkekrkvedidkkkedekrkeeerkksdedkssdkkeeldedPk 209
                 +++++kn  ++     +k++ +++   rk + + +r++s  +k krk +d+d     +krk+e+  +s++d++ +kk   + + k
  EPX72843.1 105 EKENMKNDANAVaeKPKKVKHSTKKSSRKAKSESDRHKSKDKKHKRKRKDLDESTSSKKRKKEKSSHSKSDRKKEKKSSRKSKGK 189
                 5556666655432234678889999999999*********************************999999998888877666555 PP

>> Hid1  High-temperature-induced dauer-formation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4  17.3    0.0046       8.3     577     682 ..     101     192 ..      45     202 .] 0.37

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.0046
        Hid1 577 esaseeiersnesarldsideeeeenssessrieesrsesrspslsevpelksslaitddeskaereksatessssqavsqlremsekarakesaeste 675
                 e ++e+ +++n +++ +++ ++ ++++++ssr  +s+s+ ++ + +++++  + l ++ + +k ++              ++++ s+++r+ke+++s++
  EPX72843.1 101 EEQKEKENMKNDANAVAEKPKKVKHSTKKSSRKAKSESDRHKSKDKKHKRKRKDLDESTSSKKRKK--------------EKSSHSKSDRKKEKKSSRK 185
                 222222222222222222222222222222222222222222222222221111111111111111..............1222222222222222222 PP

        Hid1 676 esrqesa 682
                 ++ ++s+
  EPX72843.1 186 SKGKDSE 192
                 2222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3390  (0.189079); expected 358.6 (0.02)
Passed bias filter:                      700  (0.0390429); expected 358.6 (0.02)
Passed Vit filter:                       266  (0.0148363); expected 17.9 (0.001)
Passed Fwd filter:                        56  (0.00312343); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.81u 0.35s 00:00:01.16 Elapsed: 00:00:00.48
# Mc/sec: 1257.46
//
Query:       EPX72844.1  [L=409]
Description: pig-U [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-85  286.7  39.3    3.6e-85  286.3  39.3    1.1  1  PIG-U       GPI transamidase subunit PIG-U
  ------ inclusion threshold ------
       0.82    9.4   2.3       0.92    9.3   0.4    2.0  2  HTH_ABP1_N  Fission yeast centromere protein N-terminal domai


Domain annotation for each model (and alignments):
>> PIG-U  GPI transamidase subunit PIG-U
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  286.3  39.3     4e-89   3.6e-85       4     381 ..      17     372 ..      12     373 .. 0.94

  Alignments for each domain:
  == domain 1  score: 286.3 bits;  conditional E-value: 4e-89
       PIG-U   4 vllrllllslassldenlssrvelstpltsfkrlqEgvallksgispYsggvvhqpPLllallslllssintkslqvlasllflliDllialllykikn 102
                 +l+ ++l    ss++e ls+r+e++tp+++f r+qEg++l+++g++pY+gg++ q+PLll l +++    +  +   ++ +l+ ++ ++ ++++y+i +
  EPX72844.1  17 FLFQYYL--SRSSVSEALSKRIEIATPISNFLRVQEGLFLYRRGLDPYEGGIYFQSPLLLFL-HFT---FELLGGVDAIRMLYSFLTVANGWFVYSI-S 108
                 4555555..778999*******************************************9865.566...588999999*******************.7 PP

       PIG-U 103 kslaksekkreksktkkslsplliaavYlfNPltilscvslStsvlsnlllllslylalkgkallsalslalatylslypllllapllllllkllkask 201
                 k++++++k+re    +  +s+l+i ++Yl+NPlt+l ++++S++v+ n+++l+++y+a++g  +  a++ al+  +++  ++l++p  ++l +      
  EPX72844.1 109 KKFQENRKRRELY--A-GTSSLWIYIIYLLNPLTFLPTIACSSDVVLNFFTLTFVYFAIQGYQVGYACTTALSLFINPSTISLVLPSYYILRR------ 198
                 8888777664432..3.389********************************************************************88777...... PP

       PIG-U 202 skkpsksnklskllrllllfllyllvLllaSfllggswsflratygniltvsdltPnlGlfWYfFtemFdrFrsfFlfvFqllpflyvlPLtirLrkqp 300
                       sn+  +l ++l++fl+y+ +L+  S++l +s +fl a +  + + +dl+Pn+Gl+WYfFte+F++Fr+fFlfvF + p+++++P+tirLrk p
  EPX72844.1 199 ------SNQNVHLSKTLIIFLFYMSCLVFGSAILLNSYNFLMAPLHVYRNAHDLSPNIGLWWYFFTEVFEEFRLFFLFVFSVAPVMFIIPITIRLRKLP 291
                 ......677778999************************************************************************************ PP

       PIG-U 301 llllvlllalilifkpyptvgdlalllsLlplfkellkrmkysfiillillvtllLspvfyhlWivkgtGNaNFffaitLv 381
                 l+++vl++++  ifk yp++ d++l++sLlp+f ++ ++mkys+++  +++++++L+ +fyh Wi  g GNaNFf+a++L+
  EPX72844.1 292 LIATVLMMGIHGIFKIYPSIADYSLFVSLLPIFGKVQENMKYSLLANNVIVFAFVLGTTFYHSWITLGCGNANFFYASNLI 372
                 *******************************************************************************97 PP

>> HTH_ABP1_N  Fission yeast centromere protein N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.4    0.0001      0.92      33      53 ..      15      35 ..       6      38 .. 0.86
   2 ?   -1.6   0.1      0.26   2.4e+03      41      54 ..     181     194 ..     180     195 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.0001
  HTH_ABP1_N 33 FeqeygqkisqstvSeiLSsk 53
                F   +++ +s+s+vSe LS++
  EPX72844.1 15 FSFLFQYYLSRSSVSEALSKR 35
                55669999***********98 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.26
  HTH_ABP1_N  41 isqstvSeiLSskY 54 
                 i  st+S +L s Y
  EPX72844.1 181 INPSTISLVLPSYY 194
                 678****9997766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (409 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       706  (0.0393775); expected 358.6 (0.02)
Passed bias filter:                      269  (0.0150036); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 2798.63
//
Query:       EPX72845.1  [L=178]
Description: ribosomal protein subunit S18 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
     0.0015   18.9   0.0     0.0019   18.6   0.0    1.2  1  Ribosomal_S11  Ribosomal protein S11
  ------ inclusion threshold ------
      0.068   12.7   0.0      0.084   12.4   0.0    1.1  1  BcrAD_BadFG    BadF/BadG/BcrA/BcrD ATPase family


Domain annotation for each model (and alignments):
>> Ribosomal_S11  Ribosomal protein S11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0   2.1e-07    0.0019       4      80 ..      64     142 ..      62     177 .. 0.76

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 2.1e-07
  Ribosomal_S11   4 hiqasfnntiititdlkGaevlvksaGglgvkasrkssPyaaqlaaekaaekv..ldkGikavevkvkgpGpGreaalr 80 
                    h ++  nnt +t+ +   + ++ +saG++g+++ ++    +a ++++++ e++  ++  i+++ v  +g    rea   
     EPX72845.1  64 HAKCLKNNTHVTLCNPDKKIIFKASAGSCGFRKGKRRGYDTAYTVTSRVLEQIrlKNLSIENLYVVFRGFSQAREAVQN 142
                    666778*************************999877777777778888776422688899999999997777776554 PP

>> BcrAD_BadFG  BadF/BadG/BcrA/BcrD ATPase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   9.4e-06     0.084      10      78 ..      72     139 ..      70     160 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 9.4e-06
                  EEEEEEETTTEEEEEEEE--TTS-HHH.........HHHHHHHHHHT--GGGECEE..EEESTTCCCTC CS
  BcrAD_BadFG  10 tkavlmdekgevlgrgitnsanlesvrfeaaekvleealtealerageeeadieetylvgtgyGratlp 78 
                  t + l + +++++ ++ ++s  ++  +++   +   ++ + +le+ ++++ +ie +y+v+ g+++a++ 
   EPX72845.1  72 THVTLCNPDKKIIFKASAGSCGFR-KGKRRGYDTAYTVTSRVLEQIRLKNLSIENLYVVFRGFSQAREA 139
                  77889999****************.777889999******************************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (178 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       350  (0.0195214); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1310.03
//
Query:       EPX72846.1  [L=540]
Description: chromatin silencing protein Clr2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.2e-16   59.9   0.9    7.9e-16   58.7   0.9    1.7  1  Clr2_transil  Transcription-silencing protein, cryptic loci r
    7.8e-05   23.5   1.0     0.0041   17.9   0.1    2.9  2  Clr2          Transcription-silencing protein Clr2


Domain annotation for each model (and alignments):
>> Clr2_transil  Transcription-silencing protein, cryptic loci regulator Clr2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.7   0.9   8.8e-20   7.9e-16       1      68 []     144     208 ..     144     208 .. 0.95

  Alignments for each domain:
  == domain 1  score: 58.7 bits;  conditional E-value: 8.8e-20
                   -EESS--TT-EEEEE-----------EEEEE--TTS--B-SHHHHHHHHHHHHH-TT--GGG--SHHH CS
  Clr2_transil   1 yvLkelPagYalyehqkgkeeknerkdtyLyGhpsgkrfrSpaeflpHllwLltdkekdvknCsCklC 68 
                   yvL++lP++Y++y ++ + ++   r + ++yGhp g+ frS+ +f  Hl+wL++d +++ +nC C lC
    EPX72846.1 144 YVLEALPKHYEIYLRDGSGSK---RGEYWVYGHPGGRPFRSVSDFQYHLYWLVSDLSRNATNCCCSLC 208
                   99***********99877654...78****************************************** PP

>> Clr2  Transcription-silencing protein Clr2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1      0.85   7.6e+03      94     108 ..     108     122 ..      72     154 .. 0.59
   2 !   17.9   0.1   4.5e-07    0.0041       1     146 []     378     489 ..     378     489 .. 0.70

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.85
        Clr2  94 ppakpkpleavviee 108
                 ++++ +p+ +v+ +e
  EPX72846.1 108 SHRSRPPSRTVSTDE 122
                 223333333333444 PP

  == domain 2  score: 17.9 bits;  conditional E-value: 4.5e-07
        Clr2   1 yyqGvylGaEriwvgDtVRlkpsesdnnlasklelssdasndkadvlvideIqvllktadeedleeketirlaGkvytlvrkraykppssnaappakpk 99 
                 ++ Gv++GaE++wv+D   l + +               + + + ++ i++I v++            t+ ++G+  +   ++a++     ++     k
  EPX72846.1 378 HFLGVFYGAEKLWVNDLCILHNASLP------------SQFTGTCFMSISDIFVNI----------DDTVCIQGSFWKQKDATAQTF----HQFRDRNK 450
                 789*************9988877766............677889999999999875..........579999999999999888763....33322222 PP

        Clr2 100 pleavvieelpkgfkavelrkygewyrvh.sgkevelsendvaGRfYe 146
                  + +      +++ + ++     e   +h  ++e++ ++ d+aGR+Ye
  EPX72846.1 451 LSRR------IQMAEDITR---TEYTLMHsDSSEFVCQLADIAGRWYE 489
                 2222......222223333...24445566778888899999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (540 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       671  (0.0374254); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.27s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 3670.29
//
Query:       EPX72847.1  [L=548]
Description: vitamin H transporter Vth1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-26   93.4  26.8    1.2e-26   93.4  26.8    1.4  1  MFS_1     Major Facilitator Superfamily
     0.0001   21.3  15.6     0.0037   16.2   4.7    2.3  2  Sugar_tr  Sugar (and other) transporter


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.4  26.8   1.4e-30   1.2e-26       1     350 [.      73     473 ..      73     476 .. 0.77

  Alignments for each domain:
  == domain 1  score: 93.4 bits;  conditional E-value: 1.4e-30
       MFS_1   1 lllaaflsalarsilgpalplalaedlg.........ispseigllltlyalgaavaslplGrlsdrfGrrr.vlllglllfalglllll.fa..sslw 86 
                 l++++fl+++ r+ ++++++  +++  g         ++p+ ++l l+l+++g++++ +p   ++  + +   v  + l++ ++g l+ + ++  ++  
  EPX72847.1  73 LWILYFLACCLRFSVSLSFT--MNTKQGhsliqtlpgYTPHLLSLGLALFYVGYVIFEVPSNLMMVFVEPSVwVARIQLTIGIVG-LCHTvLGtkHGNA 168
                 68899999999999999996..444444456666666*****************************9975555999999999999.6655354688999 PP

       MFS_1  87 .lllvlrvlqGlgagalfpagaaliadwfpkeergraigllsagfslGailgpllgg.........llasslgWravfyilaivsllafvlfllllpee 175
                  + ++lr++ G+++++l+p+ a++i++w+ +++ g+ ig++++++++Ga++  l+++          l+   g++++f++ ++vs+  ++ + ++lp+ 
  EPX72847.1 169 kAYVALRFFLGVAESGLWPGLAYYISRWYQGQHLGKRIGWYYTAAQIGAAVVSLVSAgfqkmdntrGLY---GYQWMFLVWGVVSVAQALTIPWWLPAV 264
                 9***************************************************99999566666555555...7*****************99****999 PP

       MFS_1 176 pperkrkspkeee.................................kgtgpaplvpawkallkdpvlw.illialllfffgfsglltllplylqevlgl 240
                 ++  k+ +++                                    +  ++  +v+ + + + d  +w ++li + +++ + +g++ + +l+  e+ + 
  EPX72847.1 265 DSYQKNRRDILSYiplpewmknmsptrmqlfnqnekhlhrrymsgmNLGKQWTWVD-LLKCCLDLRVWpFVLIYFGVVG-VGNGIFGYCTLI-IEQINP 360
                 99999988877779999999999999999999998888888888884444445555.3334444447754555555554.555555555554.444444 PP

       MFS_1 241 s......glllaglllallalvgailallagrlsdrlgrrrrlllallllllaalglallavtssavllllvlvliGfglgfvfpsllalasdla.... 329
                 +      +ll a   + ++ ++g    +l+  l dr+    rl++ ++ +l++ +gl+++  +++a+  + +l++iGfglg ++p+ +a++s+++    
  EPX72847.1 361 KfssttiSLLNAP--IWVCDALG---IILVMPLYDRFRY--RLTFLISNCLIIIAGLCVATYAHTAWSRYGGLLMIGFGLGPTVPICMAWCSEVMvvsy 452
                 4435555445555..56666666...77899999**877..888888888888888888888877888888***********************95543 PP

       MFS_1 330 ppeeagtasglfntagslgga 350
                 +    ++ ++l++ +g+lg++
  EPX72847.1 453 GDVGVAASLALVSGVGNLGSV 473
                 333333555555566666665 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   4.5   2.8e-05      0.25      86     209 ..     152     272 ..     140     369 .. 0.71
   2 !   16.2   4.7   4.1e-07    0.0037      44     130 ..     363     447 ..     288     509 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 2.8e-05
                 HHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHHHHHHH CS
    Sugar_tr  86 fvigavlqaaakgknsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglglnktsnadgwrillglqlvpalll 184
                  ++g + +++ ++  +  ++++ R+++G++  +       yis     ++ g+ +++y +a ++G  v + + +g++k++n+ g    +++ lv+ ++ 
  EPX72847.1 152 GIVGLCHTVLGTKHGNAKAYVALRFFLGVAESGLWPGLAYYISRWYQGQHLGKRIGWYYTAAQIGAAVVSLVSAGFQKMDNTRGLYGYQWMFLVWGVVS 250
                 4556666666666689999**************************************************************888888888888888888 PP

                 HHHGGGS---HHHHHHTT-HHHHHH CS
    Sugar_tr 185 lilllflPESPrylvekgkeeeake 209
                 ++  l++P   ++l  ++ +++ ++
  EPX72847.1 251 VAQALTIP---WWLPAVDSYQKNRR 272
                 88888888...88888888885444 PP

  == domain 2  score: 16.2 bits;  conditional E-value: 4.1e-07
                 ...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTT CS
    Sugar_tr  44 ssvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvGigvGlasvlvPmyisEi 130
                 ss++++l+ +   v  ++G +++++l drf ++ ++li++ l +i++++ a+     + +  + g + +G+g+G +  ++  ++sE+
  EPX72847.1 363 SSTTISLLNAPIWVCDALGIILVMPLYDRFRYRLTFLISNCLIIIAGLCVATYA--HTAWSRYGGLLMIGFGLGPTVPICMAWCSEV 447
                 66777788888889999****************************999998877..479999***********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (548 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       476  (0.0265492); expected 358.6 (0.02)
Passed bias filter:                      263  (0.014669); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.31s 00:00:00.89 Elapsed: 00:00:00.48
# Mc/sec: 3459.07
//
Query:       EPX72848.1  [L=162]
Description: V-type ATPase V0 subunit C [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.3e-33  113.2  34.1    3.1e-21   75.5  14.5    2.1  2  ATP-synt_C  ATP synthase subunit C


Domain annotation for each model (and alignments):
>> ATP-synt_C  ATP synthase subunit C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.0  11.6   1.2e-15   2.1e-11       2      60 .]      17      75 ..      16      75 .. 0.96
   2 !   75.5  14.5   1.7e-25   3.1e-21       1      60 []      92     151 ..      92     151 .. 0.99

  Alignments for each domain:
  == domain 1  score: 44.0 bits;  conditional E-value: 1.2e-15
                HHHHHH.GGGHHHHHHHHHHHHHHHHHHHHSGHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  ATP-synt_C  2 gaglavGlsalgsGigiGkagsagiravarnpklftksliilafaeaialygLivalil 60
                g+  a++++ +g+++g++kag ++  + +++p+l++k  i++++a++ia+ygL+v++++
  EPX72848.1 17 GCTAAIVFASFGAAYGTAKAGVGISAMGVLRPDLIVKNTIPVVMAGIIAIYGLVVSVLI 75
                778999**************************************************997 PP

  == domain 2  score: 75.5 bits;  conditional E-value: 1.7e-25
                 HHHHHHH.GGGHHHHHHHHHHHHHHHHHHHHSGHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  ATP-synt_C   1 lgaglavGlsalgsGigiGkagsagiravarnpklftksliilafaeaialygLivalil 60 
                 lgagl+vGl++l++G++iG++g+ag+r++a++p+lf+ +++il+fae+++lygLival+l
  EPX72848.1  92 LGAGLSVGLAGLAAGFAIGIVGDAGVRGTAQQPRLFVAMILILIFAEVLGLYGLIVALLL 151
                 7*********************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       772  (0.0430587); expected 358.6 (0.02)
Passed bias filter:                      302  (0.0168442); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.44
# Mc/sec: 1118.37
//
Query:       EPX72849.1  [L=798]
Description: U3 snoRNP-associated protein Nan1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
       0.27   11.5   2.1         20    5.5   0.0    3.1  3  Glyco_hyd_101C  Glycosyl hydrolase 101 beta sandwich domain
       0.41   11.6   4.1         17    6.4   0.1    5.0  5  WD40            WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> Glyco_hyd_101C  Glycosyl hydrolase 101 beta sandwich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.25   2.3e+03      79     101 ..     260     283 ..     210     287 .. 0.76
   2 ?    3.6   0.2    0.0084        76      64     102 ..     455     494 ..     401     501 .. 0.80
   3 ?    5.5   0.0    0.0022        20      79     103 ..     611     635 ..     604     641 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.25
                     GG-EEEEEESS-.SEEEEE--HHH CS
  Glyco_hyd_101C  79 deeklYhynpkg.gtstwkLpekw 101
                     +  ++ h+ +++ g  tw L+ ++
      EPX72849.1 260 SGPRIMHWHANAlGGLTWALDGEY 283
                     445777886654477789988765 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.0084
                     EEEE-B-T.TS-B--GGG-EEEEEESS-SEEEEE--HHHH CS
  Glyco_hyd_101C  64 LlPWnada.tgkkekadeeklYhynpkggtstwkLpekwa 102
                     L  W++++ + ++ k ++  l ++  +  ++twkL ++  
      EPX72849.1 455 LDCWTTNTlDQQQRKIKQTALKFWQFDTVAKTWKLMTRID 494
                     4469988877888888888****************87765 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.0022
                     GG-EEEEEESS-SEEEEE--HHHHT CS
  Glyco_hyd_101C  79 deeklYhynpkggtstwkLpekwak 103
                     ++ +l  +n  + t++w+L+ k+++
      EPX72849.1 611 SQRRLMVWNVVSMTAQWTLTGKFTG 635
                     567999****************987 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.1     0.002        17      10      37 ..     268     296 ..     261     297 .. 0.83
   2 ?   -0.5   0.1      0.31   2.7e+03      11      26 ..     439     453 ..     427     457 .. 0.67
   3 ?    1.2   0.0     0.087   7.8e+02      24      37 ..     514     527 ..     492     528 .. 0.69
   4 ?   -1.4   0.1       0.6   5.4e+03      22      34 ..     554     565 ..     536     566 .. 0.68
   5 ?   -3.5   0.0         2   1.8e+04      28      38 .]     610     619 ..     604     619 .. 0.75

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.002
                 S.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  10 H.ssvtslafspdgawlasGsdDgtvriW 37 
                 H +   +l +  dg +l+sG+  g + +W
  EPX72849.1 268 HaNALGGLTWALDGEYLVSGGQEGVLVLW 296
                 655667788888***************** PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.31
                 SSEEEEEEETTSSEEE CS
        WD40  11 ssvtslafspdgawla 26 
                 ssv ++a s+d++++a
  EPX72849.1 439 SSV-AVASSSDNSYIA 453
                 334.566888888876 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.087
                 EEEE.EETTSEEEEE CS
        WD40  24 wlas.GsdDgtvriW 37 
                  +++ G+ D t+r+W
  EPX72849.1 514 KFVTlGT-DATLRVW 527
                 3444367.******* PP

  == domain 4  score: -1.4 bits;  conditional E-value: 0.6
                 SSEEEEEETTSEE CS
        WD40  22 gawlasGsdDgtv 34 
                 ++ l +Gs Dg++
  EPX72849.1 554 SHAL-AGSLDGSI 565
                 3334.6999*998 PP

  == domain 5  score: -3.5 bits;  conditional E-value: 2
                 EETTSEEEEEE CS
        WD40  28 GsdDgtvriWd 38 
                  s  + +++W+
  EPX72849.1 610 VS-QRRLMVWN 619
                 56.8899***8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (798 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       544  (0.0303419); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.24s 00:00:00.90 Elapsed: 00:00:00.45
# Mc/sec: 5345.68
//
Query:       EPX72850.1  [L=71]
Description: DNA-directed RNA polymerase I [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.8e-32  111.4   0.5    2.1e-32  111.2   0.5    1.1  1  RNA_pol_N  RNA polymerases N / 8 kDa subunit


Domain annotation for each model (and alignments):
>> RNA_pol_N  RNA polymerases N / 8 kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.2   0.5   1.2e-36   2.1e-32       1      59 []       1      59 [.       1      59 [. 0.99

  Alignments for each domain:
  == domain 1  score: 111.2 bits;  conditional E-value: 1.2e-36
                ----SS-TTT--B-STHHHHHHHHHHTT--HHHHHHHHT--SHHHHHHHHTB--THHHH CS
   RNA_pol_N  1 MiiPVrCFtCGkvigekweeylellekgeepkdaLdaLglkryCCrrmllthvdliekl 59
                MiiP+rCF+CGkvig+kw++yl+ll++++++++aLd+Lgl+ryCCrrm+lthvdliekl
  EPX72850.1  1 MIIPIRCFSCGKVIGDKWDSYLTLLQEDNTEGEALDKLGLQRYCCRRMILTHVDLIEKL 59
                9********************************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       438  (0.0244297); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.25s 00:00:00.58 Elapsed: 00:00:00.39
# Mc/sec: 546.98
//
Query:       EPX72851.1  [L=235]
Description: GTPase Ypt4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.2e-50  169.0   0.1    8.2e-50  168.6   0.1    1.2  1  Ras              Ras family
    1.2e-33  115.9   0.0    2.4e-33  114.9   0.0    1.5  1  Roc              Ras of Complex, Roc, domain of DAPkinase
    8.7e-13   48.1   0.0    1.2e-12   47.7   0.0    1.2  1  Arf              ADP-ribosylation factor family
    2.5e-06   27.0   0.0    3.4e-06   26.6   0.0    1.1  1  Gtr1_RagA        Gtr1/RagA G protein conserved region
    6.3e-05   23.0   0.0    9.8e-05   22.4   0.0    1.4  1  MMR_HSR1         50S ribosome-binding GTPase
    0.00022   20.8   0.0     0.0026   17.3   0.0    2.0  1  GTP_EFTU         Elongation factor Tu GTP binding domain
    0.00087   18.8   0.0     0.0013   18.2   0.0    1.2  1  SRPRB            Signal recognition particle receptor beta su
     0.0048   16.8   0.1      0.098   12.6   0.0    2.6  3  RsgA_GTPase      RsgA GTPase
  ------ inclusion threshold ------
      0.013   15.7   0.0      0.041   14.2   0.0    1.7  2  AAA_22           AAA domain
      0.016   15.6   0.0      0.034   14.5   0.0    1.7  1  AAA_16           AAA ATPase domain
      0.017   15.3   0.0      0.028   14.6   0.0    1.4  1  AAA_33           AAA domain
      0.026   14.0   0.0       0.04   13.4   0.0    1.2  1  AAA_7            P-loop containing dynein motor region
      0.077   12.9   0.1       0.43   10.4   0.0    1.9  2  Peptidase_M17_N  Cytosol aminopeptidase family, N-terminal do
      0.078   13.5   0.0       0.12   12.9   0.0    1.6  1  ABC_tran         ABC transporter
      0.087   12.7   0.0        0.2   11.5   0.0    1.5  1  NACHT            NACHT domain
       0.11   12.5   0.0       0.25   11.3   0.0    1.7  2  AAA_5            AAA domain (dynein-related subfamily)
       0.13   11.7   0.0       0.22   10.9   0.0    1.4  1  TniB             Bacterial TniB protein


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  168.6   0.1   7.8e-53   8.2e-50       1     161 [.      11     176 ..      11     177 .. 0.97

  Alignments for each domain:
  == domain 1  score: 168.6 bits;  conditional E-value: 7.8e-53
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEET....TEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievd....gkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwve 95 
                 K+vl G s++GK++ll rfvk+++++e ++T+g+df ++ + v     +k++kl++wDTAGqe+f+s++++yyr+a +++lvydit++esf ++++wv+
  EPX72851.1  11 KVVLAGPSGTGKSCLLERFVKGQWNDEIQHTVGIDFASRIVIVGmgnqQKRIKLQLWDTAGQEKFRSVARNYYRGAAAAVLVYDITNKESFCELSSWVS 109
                 89*************************************9999888889************************************************** PP

                 HHHHHSTTTSEEEEEEETTTGGGG-SS-HHHHHHHHHHHT.SEEEEEBTTTTCTHHHHHHHHHHHHH CS
         Ras  96 eikrvaeenvpivLvGnKvDleekravsteegeelakelg.lkfletSAktnenveeafeellreil 161
                 +i+ +a++++ +vL GnK+Dl+e+r+vstee+ e+++ ++ +   etSA +  +v++ f +++++il
  EPX72851.1 110 DIRAMAPSSLCVVLAGNKCDLNEQRKVSTEEAAEFCSAKQiASAHETSAFSGSQVDDCFLSVVSTIL 176
                 **************************************9977889*****************99986 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.9   0.0   2.3e-36   2.4e-33       1     120 []      11     130 ..      11     130 .. 0.89

  Alignments for each domain:
  == domain 1  score: 114.9 bits;  conditional E-value: 2.3e-36
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE...GHHHHCHH CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd...srssenlk 96 
                 Kvvl G sg+GK++ll+rfv+++ +++ + t+g+df+++ v  i g+ n+  +k++kl++WDtaGqe+frs+++ y+r+aa+a+lvyd   ++s+ +l+
  EPX72851.1  11 KVVLAGPSGTGKSCLLERFVKGQWNDEIQHTVGIDFASRIV--IVGMGNQ--QKRIKLQLWDTAGQEKFRSVARNYYRGAAAAVLVYDitnKESFCELS 105
                 9***********************************99866..5666655..578*********************************64333456899 PP

                 HHHHHHHHHCSSS.-EEEEEE-TTT CS
         Roc  97 eWlkelkkvagks.pvilvgnkiDl 120
                 +W+++++++a++s +v+l gnk+Dl
  EPX72851.1 106 SWVSDIRAMAPSSlCVVLAGNKCDL 130
                 ***********995677999***95 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.7   0.0   1.1e-15   1.2e-12      15     159 ..      10     164 ..       2     183 .. 0.80

  Alignments for each domain:
  == domain 1  score: 47.7 bits;  conditional E-value: 1.1e-15
                 EEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSSEE..EEEEEE......TTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHHH CS
         Arf  15 lrilllGLDnaGKtTilkklkleelvt.tvPTigfn..veelei......knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeL 104
                 ++++l G  ++GK+ +l+++ +++ ++ ++ T+g +  ++ + +      k +k+++wD  Gqek R++ +nY++   a + v D +++e + e ++ +
  EPX72851.1  10 VKVVLAGPSGTGKSCLLERFVKGQWNDeIQHTVGIDfaSRIVIVgmgnqqKRIKLQLWDTAGQEKFRSVARNYYRGAAAAVLVYDITNKESFCELSSWV 108
                 79999***************99887654778887651044444478888899*******************************************9999 PP

                 HHHCTSGCCTTSEEEEEEE-TTSTTS..S-HHHHHHHTTGGGSSSSSSEEEEEEBTT CS
         Arf 105 kalleeeelkevallvlaNKqDlpea..lseeelrellgleelkgkrkleiqkcsav 159
                 + + ++    +  +++ +NK Dl+e+  +s+ee +e  + +++ ++++ + ++ s v
  EPX72851.1 109 SDIRAMAPS-SLCVVLAGNKCDLNEQrkVSTEEAAEFCSAKQIASAHETSAFSGSQV 164
                 998776655.55566789*****8752278889999999999987666655555444 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.0   3.2e-09   3.4e-06       1     173 [.      11     177 ..      11     183 .. 0.71

  Alignments for each domain:
  == domain 1  score: 26.6 bits;  conditional E-value: 3.2e-09
   Gtr1_RagA   1 kvLLmGksgsGKtsmrsiiFdnylardtlrlgatidveksev.....rflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDvesreleed 94 
                 kv+L G+sg GK+++ +  F + + +d ++ ++ id     v     +  + ++l+lwD  Gqe+f   +      + +r  ++ + V D++    +e+
  EPX72851.1  11 KVVLAGPSGTGKSCLLER-FVKGQWNDEIQHTVGIDFASRIVivgmgNQQKRIKLQLWDTAGQEKFRSVA-----RNYYRGAAAAVLVYDIT---NKES 100
                 89*************998.5555566655555666555544411112345679***********998875.....66777888888888999...6788 PP

   Gtr1_RagA  95 letlkeilealrqyspeakvfvli.hKmDliqedereeifeerkeeireeieklekeeiqffaTSiwdeslykAfssivq 173
                 + +l++ ++ +r + p     vl  +K+Dl   ++r ++ +e+++e  ++ + ++ +e++ f+ S  d+   +  s i +
  EPX72851.1 101 FCELSSWVSDIRAMAPSSLCVVLAgNKCDLN--EQR-KVSTEEAAEFCSAKQIASAHETSAFSGSQVDDCFLSVVSTILT 177
                 9999999*********988888875899986..333.3444444444444443344468888888888888877777765 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.0   9.3e-08   9.8e-05       1      88 [.      11      99 ..      11     136 .. 0.68

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 9.3e-08
                EEEEEESTTSSHHHHHHHHHTS.....TEEESSSTTSSSSEEEEEEEETT.EEEEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEETT.TT CS
    MMR_HSR1  1 evaivGrpNvGKStLinaltge.....kaivsdkpgtTrdinegrvklkg.keielvDtpGliegaseekglgkaflaleeadlillvvdas.ee 88
                +v+++G + +GKS L+ + ++        ++  + ++ r ++ g  + ++  +++l+Dt+G  e   + +++++++ +   a +++lv d++ +e
  EPX72851.1 11 KVVLAGPSGTGKSCLLERFVKGqwndeIQHTVGIDFASRIVIVGMGNQQKrIKLQLWDTAG-QE---KFRSVARNYYRG--AAAAVLVYDITnKE 99
                699*****************843412245556666778888888777555589********.54...444777777753..55666666655223 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   2.4e-06    0.0026      54     183 ..      42     166 ..       8     180 .. 0.66

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 2.4e-06
                 SCSSCEEEEEE....TTCSSEEEEEEEESSSGGGHHHHHHHHHT-SEEEEEEETTTB..STHHHHHH..HHHHHHTTTEEEEEEESCGSTHHHHHHHHH CS
    GTP_EFTU  54 iTiksaaisle....ketkkylinliDtPGHvdFskevirglrvlDgavlvvdaveG..vepqteev..lrlalkegvpiivfiNKmDrlkaelkeive 144
                 + i+ a   +     +++k+ +++l Dt G ++F +   + +r +  avlv d+++    ++ +  v  +r +    + ++++ NK+D  +++   + e
  EPX72851.1  42 VGIDFASRIVIvgmgNQQKRIKLQLWDTAGQEKFRSVARNYYRGAAAAVLVYDITNKesFCELSSWVsdIRAMAPSSLCVVLAGNKCDLNEQRKVSTEE 140
                 444433333334554688999999*************9999************9854336665554422566677777799999****98665444444 PP

                 HHHHHHHHHHHHHHHHHHTTTTTEEEEEEBTTTTBTHHH CS
    GTP_EFTU 145 evkqklsrkeeklekygekgekevpvvfgSalkgegvkt 183
                 ++  ++      ++     + ++ +   +Sa++g +v++
  EPX72851.1 141 AA--EF------CS----AK-QIASAHETSAFSGSQVDD 166
                 43..45......11....11.133344455555555554 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   1.2e-06    0.0013       5     124 ..      11     130 ..       8     149 .. 0.68

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 1.2e-06
                 EEEEE-STTSSHHHHHHHHHHSS---B---S.S-EEETTG.........GGTT-SEEEETT-GCCSHHHHHHHHHHGGEEEEEEEEETTS-HHHHHHHH CS
       SRPRB   5 avllvGlsdsGKTslftrLttdsvkktvtSq.essaalkv......ksekgskltliDfPGheklrqklleklkaksslkglvfvvDStidpkevkevA 96 
                 +v+l+G+s +GK  l++r  +++ ++         +a ++      +++k  kl+l D  G+ek+r+   ++    + + + v v D t  +k  ++  
  EPX72851.1  11 KVVLAGPSGTGKSCLLERFVKGQWNDEIQHTvGIDFASRIvivgmgNQQKRIKLQLWDTAGQEKFRSVARNY---YRGAAAAVLVYDIT--NK--ESFC 102
                 699******************9554443333244555555556677889999**************976666...44445555555644..22..2444 PP

                 HHHHHHHHHHHHHTT---EEEEEE-TTS CS
       SRPRB  97 EllyeilliteklkdavdiliACnKqel 124
                 El   +  i ++++ ++ +++A nK +l
  EPX72851.1 103 ELSSWVSDIRAMAPSSLCVVLAGNKCDL 130
                 5555555555555666666666666665 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   0.0   9.2e-05     0.098     102     122 ..      12      32 ..       7      45 .. 0.81
   2 ?    0.4   0.0      0.52   5.5e+02      51      99 ..      62     110 ..      45     118 .. 0.77
   3 ?   -0.4   0.0      0.87   9.2e+02      47      66 ..     119     139 ..     110     165 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 9.2e-05
                  EEEECSTTSSHHHHHHHHCTT CS
  RsgA_GTPase 102 svlvGqSGvGKStLinallpe 122
                  +vl+G+SG GKS L+++++  
   EPX72851.1  12 VVLAGPSGTGKSCLLERFVKG 32 
                  69*************998764 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.52
                  EEEE-GGG--HHHHHHHHHHHHHHTTSEEEE--TTTHTTHHHHHHHCTT CS
  RsgA_GTPase  51 ivlnKiDlleeeeeleelkeelealgyevllvsaktkegleelkellkd 99 
                  i l   D + +e+  +  ++ ++ +  +vl+ + ++ke++ el+++++d
   EPX72851.1  62 IKLQLWDTAGQEKFRSVARNYYRGAAAAVLVYDITNKESFCELSSWVSD 110
                  5566667777777555566778999999999999999999999999887 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.87
                  -EEEEEEE-GGG--HHH.HHH CS
  RsgA_GTPase  47 iepvivlnKiDlleeee.ele 66 
                  + +v++ nK+Dl e+++ ++e
   EPX72851.1 119 LCVVLAGNKCDLNEQRKvSTE 139
                  556777899999999884222 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   3.8e-05     0.041       9      34 ..      13      38 ..      11      84 .. 0.74
   2 ?   -1.5   0.0       2.7   2.8e+03     106     133 ..      98     130 ..      68     133 .. 0.73

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3.8e-05
      AAA_22  9 vvtGesGtGKTtllrrlleqldeeak 34
                v+ G+sGtGK+ ll+r+++   +++ 
  EPX72851.1 13 VLAGPSGTGKSCLLERFVKGQWNDEI 38
                799**************998654444 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 2.7
      AAA_22 106 eealeeLrsllnl....srkgvqliLvGtp.el 133
                 +e + eL+s++ +    + +++ ++L+G   +l
  EPX72851.1  98 KESFCELSSWVSDiramAPSSLCVVLAGNKcDL 130
                 556666767766667777788888888876665 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   3.2e-05     0.034      27      99 ..      12     109 ..      10     181 .. 0.58

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 3.2e-05
      AAA_16  27 vllsGesGvGKsslvrellr.alekd..........ggiflrgkcdqlesa.............ipysa.laqalareellrqlldeaesaeleawre 99 
                 v+l G+sG+GKs l++++ + +++++            i++ g   q ++              ++ +  + + +a+  l+ ++ ++++ +el+ w  
  EPX72851.1  12 VVLAGPSGTGKSCLLERFVKgQWNDEiqhtvgidfaSRIVIVGMGNQQKRIklqlwdtagqekfRSVARnYYRGAAAAVLVYDITNKESFCELSSWVS 109
                 789************98887566655554455555422222222222211122222222222222222233333334455555555555555555555 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   2.6e-05     0.028       2      96 ..      12     115 ..      12     145 .. 0.66

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 2.6e-05
      AAA_33   2 vllvGlpGsGKstlaerllkklg....avllssdtlrr.rlfgtdqqsktdytrvldrlyq.ilnelarkalsagrnvil..datnlsr.rerarflkl 91 
                 v+l G++G+GKs l+er +k +       ++  d ++r  ++g ++q+k+   +++d + q   + +ar + + +++++l  d tn +  +e + +++ 
  EPX72851.1  12 VVLAGPSGTGKSCLLERFVKGQWndeiQHTVGIDFASRiVIVGMGNQQKRIKLQLWDTAGQeKFRSVARNYYRGAAAAVLvyDITNKESfCELSSWVSD 110
                 7899*************9965557785555888888885555555555555556555544414444454444444444445788877777777777666 PP

      AAA_33  92 arrlg 96 
                  r + 
  EPX72851.1 111 IRAMA 115
                 65555 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   3.8e-05      0.04      35      71 ..      11      48 ..       4      53 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 3.8e-05
       AAA_7 35 pvllvGptGtGKtviikdllkkld.kekylsltinfsa 71
                +v+l Gp+GtGK++++++++k    +e   ++ i f +
  EPX72851.1 11 KVVLAGPSGTGKSCLLERFVKGQWnDEIQHTVGIDFAS 48
                799***************77665514445566677766 PP

>> Peptidase_M17_N  Cytosol aminopeptidase family, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00041      0.43      51     101 ..      46      98 ..      37     115 .. 0.69
   2 ?   -0.4   0.0      0.94   9.9e+02      13      38 ..     138     163 ..     121     181 .. 0.69

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00041
  Peptidase_M17_N  51 kakrvllVGLGkeee.ltaealrkaagaaaralkgakvttiavalp.legkns 101
                       a+r+++VG G++++ ++ + +  a++  +r++++     +a+a+   +++n+
       EPX72851.1  46 FASRIVIVGMGNQQKrIKLQLWDTAGQEKFRSVARNYYRGAAAAVLvYDITNK 98 
                      399************97777777777777777776554444444444444555 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.94
  Peptidase_M17_N  13 aaekldealagllsellkegdftGka 38 
                      ++e+ +  +a++++++ +++ f+G++
       EPX72851.1 138 TEEAAEFCSAKQIASAHETSAFSGSQ 163
                      33456667777888888888888765 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   0.00011      0.12      13      36 ..      11      34 ..       8     165 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.00011
                EEEEEESTTSSHHHHHHHHTTSS- CS
                xxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 13 kvaivGenGaGKStLlkllagllk 36
                kv++ G++G+GKS Ll+ + +   
  EPX72851.1 11 KVVLAGPSGTGKSCLLERFVKGQW 34
                689*************98877655 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00019       0.2       3      30 ..      12      39 ..      11      48 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00019
                EEEEC-TTTCHHHHHHHHHHHHCTS-SC CS
       NACHT  3 vilqGeaGsGKTtLlqklalawaegklp 30
                v+l G++G GK+ Ll++++   + ++ +
  EPX72851.1 12 VVLAGPSGTGKSCLLERFVKGQWNDEIQ 39
                799***************9987766655 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00024      0.25       2      21 ..      12      31 ..      11      65 .. 0.89
   2 ?   -2.9   0.0         6   6.3e+03      92     125 ..     134     159 ..     116     171 .. 0.51

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00024
                EEEE--SSSSHHHHHHHGGG CS
       AAA_5  2 vlLvGppGtgKselaerlaa 21
                v+L Gp+GtgKs l er+ +
  EPX72851.1 12 VVLAGPSGTGKSCLLERFVK 31
                89*************99865 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 6
                 SEEE..-SSSEEE---......-EEEEEESS--.. CS
       AAA_5  92 rrllleeggelvkaknddllerfrviatanpld.r 125
                 r++++ee  e ++            ia+a++ + +
  EPX72851.1 134 RKVSTEEAAEFCS---------AKQIASAHETSaF 159
                 2222222222222.........3335555555554 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00021      0.22      37      67 ..      11      41 ..       2      68 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00021
        TniB 37 nlllvGdsnnGKtmivekFarlhppekdeda 67
                +++l+G+s +GK+ ++e+F + + +++ +++
  EPX72851.1 11 KVVLAGPSGTGKSCLLERFVKGQWNDEIQHT 41
                5789****************99877654443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (235 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       586  (0.0326845); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        83  (0.00462937); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.38
# Mc/sec: 1853.65
//
Query:       EPX72852.1  [L=81]
Description: hypothetical protein SOCG_00614 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       355  (0.0198003); expected 358.6 (0.02)
Passed bias filter:                      231  (0.0128842); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.22s 00:00:00.60 Elapsed: 00:00:00.40
# Mc/sec: 600.48
//
Query:       EPX72853.1  [L=649]
Description: hypothetical protein SOCG_00615 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-19   70.1  20.6    0.00014   22.4   0.4    9.3  9  Sel1      Sel1 repeat
  ------ inclusion threshold ------
       0.16   11.0   0.9        0.2   10.7   0.0    1.6  2  GHL10     Glycosyl hydrolase-like 10


Domain annotation for each model (and alignments):
>> Sel1  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.0   0.1    0.0095        86       3      32 ..      92     120 ..      90     125 .. 0.80
   2 !    9.6   0.2   0.00017       1.6      20      38 .]     147     165 ..     134     165 .. 0.85
   3 ?    1.9   0.0     0.046   4.1e+02       2      31 ..     167     194 ..     166     198 .. 0.81
   4 ?   -1.4   0.0      0.48   4.3e+03       8      35 ..     329     354 ..     324     357 .. 0.75
   5 !   15.6   0.1   2.2e-06      0.02       3      37 ..     360     393 ..     358     394 .. 0.87
   6 !    5.2   0.0    0.0042        37       7      31 ..     433     455 ..     429     456 .. 0.89
   7 !    8.0   0.0   0.00054       4.8      24      38 .]     533     547 ..     520     547 .. 0.87
   8 !   22.4   0.4   1.6e-08   0.00014       2      37 ..     549     582 ..     548     583 .. 0.90
   9 !    9.7   0.1   0.00015       1.4       3      29 ..     588     612 ..     586     614 .. 0.88

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.0095
        Sel1   3 AmyrLGmfylylnGl.gvpkDpekAiewyek 32 
                 A   LG    +++Gl g ++D + A+ +y +
  EPX72853.1  92 AILLLG--NTLFFGLyGFEPDFRMAFNYYDQ 120
                 677899..555889977899********965 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00017
        Sel1  20 pkDpekAiewyekAAeqGd 38 
                 p Dp +A+ ++e AA+qG+
  EPX72853.1 147 PYDPALARMYWEAAAKQGS 165
                 56***************96 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.046
        Sel1   2 eAmyrLGmfylylnGlgvpkDpekAiewye 31 
                 +A + L+  y +l G  + k  ++A ++y+
  EPX72853.1 167 DAHHFLA--YHHLIGMHTVKSDSLAAQHYK 194
                 6999***..****99667778888888887 PP

  == domain 4  score: -1.4 bits;  conditional E-value: 0.48
        Sel1   8 GmfylylnGlgvpkDpekAiewyekAAe 35 
                 G+++  l+G   ++  e A +w+ +   
  EPX72853.1 329 GLIQ--LFGESKKRSLENASRWFNRGIL 354
                 7444..8888778899999999998765 PP

  == domain 5  score: 15.6 bits;  conditional E-value: 2.2e-06
        Sel1   3 AmyrLGmfylylnGl.gvpkDpekAiewyekAAeqG 37 
                 ++y +G  y++++Gl + ++D +k++ + + AA++ 
  EPX72853.1 360 SLYGMG--YIFYHGLlDNKTDLQKGLSYIKEAANMK 393
                 89****..*******44777*************986 PP

  == domain 6  score: 5.2 bits;  conditional E-value: 0.0042
        Sel1   7 LGmfylylnGlgvpkDpekAiewye 31 
                 L+   +yl+G g+   ++kA  +y+
  EPX72853.1 433 LA--DCYLHGIGTSVSKRKAALLYK 455
                 89..899************988886 PP

  == domain 7  score: 8.0 bits;  conditional E-value: 0.00054
        Sel1  24 ekAiewyekAAeqGd 38 
                 e A+e+y +AA+qGd
  EPX72853.1 533 EFAFEFYARAAAQGD 547
                 45************7 PP

  == domain 8  score: 22.4 bits;  conditional E-value: 1.6e-08
        Sel1   2 eAmyrLGmfylylnGlgvpkDpekAiewyekAAeqG 37 
                 +A  ++G +y  ++G gv kD+ekA+++ye A e+G
  EPX72853.1 549 DAILKVGDYY--YYGVGVHKDYEKAYRHYEIASEKG 582
                 68889**555..**********************98 PP

  == domain 9  score: 9.7 bits;  conditional E-value: 0.00015
        Sel1   3 AmyrLGmfylylnGlgvpkDpekAiew 29 
                 A+++++  y++++G+g ++D + A ++
  EPX72853.1 588 ALWNMA--YMHEFGKGRERDAHIAKRF 612
                 899***..************9988776 PP

>> GHL10  Glycosyl hydrolase-like 10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   2.3e-05       0.2      33     102 ..     291     361 ..     282     365 .. 0.91
   2 ?   -4.5   0.8      0.98   8.8e+03     154     183 ..     547     575 ..     542     579 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 2.3e-05
       GHL10  33 lntvyvqvkndgtalypsavakwselktgkkgedpGrDvLaevideahkrnlkv.laWFevglnakelsel 102
                   +++ +v  d + l +s +   se+  +   +  G+  L ++  e++kr+l+    WF+ g+ +++ ++l
  EPX72853.1 291 AEAIFAKVYRDLSFLNESSIHITSEKIDDLLSKSAGYIGLIQLFGESKKRSLENaSRWFNRGILHNDSNSL 361
                 6799************************************************86157******99999986 PP

  == domain 2  score: -4.5 bits;  conditional E-value: 0.98
       GHL10 154 dvDgv.qlDDyfylpesfGydlidvalYrqe 183
                 dvD++ ++ Dy+y  + +G +    + Yr++
  EPX72853.1 547 DVDAIlKVGDYYY--YGVGVHKDYEKAYRHY 575
                 8999757899988..6778887777888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (649 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       581  (0.0324056); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.26s 00:00:00.92 Elapsed: 00:00:00.46
# Mc/sec: 4266.36
//
Query:       EPX72854.1  [L=528]
Description: Noc2p-Noc3p complex subunit Noc2 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-70  237.0  13.0    3.7e-70  236.5  13.0    1.2  1  Noc2      Noc2p family
  ------ inclusion threshold ------
       0.13   12.1   3.9      0.063   13.1   0.4    2.2  3  BP28CT    BP28CT (NUC211) domain


Domain annotation for each model (and alignments):
>> Noc2  Noc2p family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  236.5  13.0   4.2e-74   3.7e-70       5     294 ..     234     525 ..     230     528 .] 0.93

  Alignments for each domain:
  == domain 1  score: 236.5 bits;  conditional E-value: 4.2e-74
        Noc2   5 lvlkkvYlalvknskf..tsvktlplinfmknsaveLygldeavsyqhafvyIrqLAihLRnalktk.kkeayksvynWqfvhsldlWsrvlsaacskk 100
                 ++++++Y  l++  k+   + ++l++i+ m+  ++eL++l ++++ ++ ++y +qL +hL+n+lk+  + +a k +ynWqf  sl++Ws+v++  +++ 
  EPX72854.1 234 ATFQHFYVHLLSFFKSspSQSESLDTIEEMQLFLIELLSLSPDTCKKIFLSYTQQLNVHLQNCLKQAdSVDAHKLIYNWQFSLSLQFWSEVICLLWEDL 332
                 678999*****99999888999*****************************************7765269***************************99 PP

        Noc2 101 eselkpLiypLvqvilgaikLiptaryfPlrlhlirsLlrLsestgtfIPvaplllevLeskelkkkp.kk.kstlkpldfevtlkvpksylktrvyqd 197
                 +  +k++   L+++il++++Lipt++y+Plrl+l+ sL+r+++st+ +IP+++ ++e+  +   k+++ ++ +++  ++d+ +tl++pk++l +++y++
  EPX72854.1 333 QIICKEISPQLINLILDTTRLIPTEQYYPLRLRLLSSLVRICRSTHLYIPLSSQFVEMAPFFLKKSRNlTReEDSTYNFDVLTTLHIPKECLASQTYRK 431
                 9999******************************************************9993333333444478999********************** PP

        Noc2 198 glieevvellleylallsksiaFPElvlpvvvqLkrflkstkneklrkqlkqLvekleenskfieekRekvefspkdreeveafekelksektPlgk 294
                 +l ++++++++ey+a++s+siaFPEl++pv+ qL+ f+ + +    +++++q+++kle++ +fi++kR ++ef++kd+++v afe++l++++tP+gk
  EPX72854.1 432 NLRKTYLSMMTEYFATFSNSIAFPELAVPVISQLRIFVSRYT---SENSISQFLQKLEDTYSFIQQKRLNIEFTQKDHSQVIAFERDLDWRSTPIGK 525
                 ***************************************955...6789**********************************************98 PP

>> BP28CT  BP28CT (NUC211) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.4   7.1e-06     0.063      31     123 ..     216     305 ..     198     354 .. 0.70
   2 ?   -2.9   0.1      0.61   5.5e+03     132     151 ..     412     445 ..     378     451 .. 0.53
   3 ?   -2.2   0.1      0.35   3.2e+03      80     105 ..     449     474 ..     424     505 .. 0.63

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 7.1e-06
                 HHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHH...HHTSTT----.-HHHHHHHHHHHHH--------TTHHHHHHHHHHHHH------- CS
      BP28CT  31 eidevEesvieafvalvlKLneatFrPlFlklveWaeeesselskkdsk.eRlitfykllnklaekLkslftsYasyllenavelLkalnekse 123
                 +i+++ ++v++a  +l++    atF  ++++l+ + +++ s++++ d++ e ++ + +ll    ++ k++f sY + l  ++ ++Lk++++ ++
  EPX72854.1 216 QIQTIINNVCKASPSLIV----ATFQHFYVHLLSFFKSSPSQSESLDTIeEMQLFLIELLSLSPDTCKKIFLSYTQQLNVHLQNCLKQADSVDA 305
                 555555555555555555....89************85555556666667999999******************************88864322 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.61
                 .....................HHHHHHHHHHHHH CS
      BP28CT 132 k..............eekkveLlrlvlstLtkcf 151
                 +              ++ + +L+++ ls++t+ f
  EPX72854.1 412 DvlttlhipkeclasQTYRKNLRKTYLSMMTEYF 445
                 1444444444444444445555555555555555 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 0.35
                 -HHHHHHHHHHHHH--------TTHH CS
      BP28CT  80 eRlitfykllnklaekLkslftsYas 105
                 + +i+f +l+  + ++L+  ++ Y s
  EPX72854.1 449 SNSIAFPELAVPVISQLRIFVSRYTS 474
                 44555555666666666666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (528 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1384  (0.0771934); expected 358.6 (0.02)
Passed bias filter:                      573  (0.0319594); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.29s 00:00:00.85 Elapsed: 00:00:00.43
# Mc/sec: 3669.49
//
Query:       EPX72855.1  [L=425]
Description: COP9 signalosome complex subunit 12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-12   47.8   0.0    3.5e-12   46.8   0.0    1.5  1  PCI       PCI domain


Domain annotation for each model (and alignments):
>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.8   0.0   1.9e-16   3.5e-12       5     104 ..     308     414 ..     305     415 .. 0.95

  Alignments for each domain:
  == domain 1  score: 46.8 bits;  conditional E-value: 1.9e-16
                 HHHHHHHHTSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH...CESEEEHHHHHHHHTSSH.....HHHHHHHHHHHHTTSSSEEEE CS
         PCI   5 dllkalrsgnlsgfseelkdleeelladdglaqllesLekkvrerllrqvsk...iyssislerlaklldlsv.....devEkilvklIrdgeirakid 95 
                  l  a+++gnl +f ++lk++ e lla+ +++  le  ++ + ++l+r+++    + ++++ + ++++l++ +       vE il+++I++g++r++++
  EPX72855.1 308 PLCHAIKKGNLGAFGQCLKKN-ESLLAKTKTYLTLEGTRNLCLRNLFRKTWIileKSTRLPTSVFQTALKVAGsdfdlLHVEAILANMISKGYMRGYLS 405
                 677899***************.******************************999******************9999989******************* PP

                 TTTTEEEEC CS
         PCI  96 qesgivvfk 104
                 +   +vv++
  EPX72855.1 406 RDRMTVVLS 414
                 *99999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (425 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       467  (0.0260472); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.22s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 3189.04
//
Query:       EPX72856.1  [L=251]
Description: ESCRT I complex subunit Vps28 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.6e-60  202.6   0.9      6e-60  202.2   0.9    1.2  1  VPS28     VPS28 protein


Domain annotation for each model (and alignments):
>> VPS28  VPS28 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  202.2   0.9   3.3e-64     6e-60       1     189 []      31     251 .]      31     251 .] 0.96

  Alignments for each domain:
  == domain 1  score: 202.2 bits;  conditional E-value: 3.3e-64
       VPS28   1 LaelysiivtleklEkaylkdaitekeYtstcnrLlsqyktilkdeevkkefksleeFvkkykldcpaAlkRlkegvpa..tveh.............. 83 
                 La+lysii+tle+lE +++kdait++ ++st + Ll+q++++lkde++ k+f+sleeF +ky+l+cp+A+kR+ke  +   tve               
  EPX72856.1  31 LASLYSIIITLENLEIVFTKDAITPDAFESTSKLLLQQWDSCLKDETLLKHFGSLEEFSSKYQLQCPRAMKRIKEHSQNnpTVEGsskvpndlsesres 129
                 89************************************************************************99886669999************** PP

       VPS28  84 ...............akakkskekkesaklvaeatqnFITlmDalkLnlkakdqlhplLsdLveslnkl.eklekdfegksklvkWliklnkmkasdeL 166
                                 +a +++  +++ak++ae++qnFIT+mDa++Ln+  kdqlhplLs+L++++++l e l+k ++g+sklv+Wl+ +n+m+ +d+L
  EPX72856.1 130 klhsnesfhnrnttiISAPTTTPPASTAKSIAELVQNFITTMDAIRLNFVFKDQLHPLLSELIICMDDLsELLNKPVSGRSKLVQWLVSINHMEPADQL 228
                 ***********9999788889999*********************************************65669************************* PP

       VPS28 167 seeearqllfdlesaYkefyklL 189
                 +ee+ ++ll +le++Y+e+y lL
  EPX72856.1 229 DEEQKEELLQNLEETYSECYGLL 251
                 *******************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (251 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       978  (0.0545485); expected 358.6 (0.02)
Passed bias filter:                      614  (0.0342462); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 1725.87
//
Query:       EPX72857.1  [L=623]
Description: CCR4-Not complex subunit Not3/5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.4e-86  288.1  25.5    7.1e-86  287.4  25.5    1.3  1  Not3          Not1 N-terminal domain, CCR4-Not complex compon
    1.1e-42  145.2   6.2    3.5e-42  143.6   6.2    1.9  1  NOT2_3_5      NOT2 / NOT3 / NOT5 family
  ------ inclusion threshold ------
      0.013   15.3   3.0      0.019   14.8   1.4    2.2  2  DUF2373       Uncharacterised conserved protein (DUF2373)
      0.028   14.8   9.2      0.032   14.6   2.4    2.9  2  Syntaxin_2    Syntaxin-like protein
       0.55   10.3   5.3        1.1    9.3   0.7    3.1  2  DUF1192       Protein of unknown function (DUF1192)
        1.1    9.7   7.0       0.36   11.3   0.2    2.9  2  Cep57_MT_bd   Centrosome microtubule-binding domain of Cep57
        2.6    7.9   9.4       0.22   11.4   2.0    2.5  2  Sec34         Sec34-like family
          5    7.8  10.0        5.4    7.7   2.8    2.9  2  DUF4404       Domain of unknown function (DUF4404)
        7.1    6.8   7.9         39    4.4   0.1    3.8  4  Exonuc_VII_S  Exonuclease VII small subunit
        8.5    7.1   8.3         81    4.0   0.6    3.8  3  FliD_N        Flagellar hook-associated protein 2 N-terminus


Domain annotation for each model (and alignments):
>> Not3  Not1 N-terminal domain, CCR4-Not complex component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  287.4  25.5     4e-89   7.1e-86       2     231 .]       3     231 ..       2     231 .. 0.97

  Alignments for each domain:
  == domain 1  score: 287.4 bits;  conditional E-value: 4e-89
        Not3   2 krklqqeidktlkkvaegveeFdeiyeklesaenqsqkeKleadLKkeikKLqrlRdqiktwlssneikdkkkLlenrkliEeamerFkavEkesKtKa 100
                 +rklq ei+kt+kkv++g+  Fde+yekl+ ++++sqkeKle+dLK++ikKLqrlRdqiktw+ssn+ikdkk+L enr+liE++me+FkavE+e+K+Ka
  EPX72857.1   3 ARKLQVEIEKTFKKVTDGIVIFDEVYEKLNVSTSASQKEKLEGDLKTQIKKLQRLRDQIKTWASSNDIKDKKALIENRRLIEAKMEEFKAVEREMKIKA 101
                 7************************************************************************************************** PP

        Not3 101 fSkeglakaaaekldpkekekeearewlkdaideLneqvekleaeieklsskkkkkkkskeka.rveeleklierhkfhieklelllrlleneelepee 198
                 fSkegl+   a k+dp+ekek+++++w+++a++eL++qve leae e+l+++ k+ k++ +k+ +++ele++ie+hk+h+e+lel++r len+++++++
  EPX72857.1 102 FSKEGLS--IALKMDPREKEKHDTIQWISSAVEELERQVELLEAETESLRATFKRGKRDISKQtHLSELESRIETHKWHQERLELIMRRLENSQISSDA 198
                 *******..55579******************************************99766667*********************************** PP

        Not3 199 vekikedieyyvesnqdedfeedeelYddlnld 231
                 +++i++di yyves+qd+df ed ++Yddl+ld
  EPX72857.1 199 INNIQDDIMYYVESSQDADFAEDMNIYDDLDLD 231
                 ******************************997 PP

>> NOT2_3_5  NOT2 / NOT3 / NOT5 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.6   6.2   1.9e-45   3.5e-42       3     131 .]     489     615 ..     487     615 .. 0.97

  Alignments for each domain:
  == domain 1  score: 143.6 bits;  conditional E-value: 1.9e-45
    NOT2_3_5   3 llnspdsedaekprqyepklphptsisypqeplyeklesakklekldedtLFyiFYysqgtleqllAakeLkkrsWryhkelktWflreekeepkekte 101
                 ++  pd+ da+kp+ y pk p+p++ +ypq+pl + ++s+++ e +d dtLFy+FYy +gt++q+lA +eLkk+sWr+hk+++tWf+r+  eepk +t+
  EPX72857.1 489 CVYVPDAVDAAKPKFYVPKDPYPVPHYYPQQPL-PLFDSPEMTEVVDPDTLFYMFYYLPGTYQQYLAGRELKKQSWRFHKKYTTWFQRH--EEPKMITD 584
                 6789****************************6.99*****************************************************..******** PP

    NOT2_3_5 102 eyekgsYkyFDye.tWlkrrkkdfkleyekL 131
                 eye+g+Y+yFD+e +W +r+k df++ ye+L
  EPX72857.1 585 EYESGTYRYFDFEgDWVQRKKADFRFMYEYL 615
                 ***********999**************997 PP

>> DUF2373  Uncharacterised conserved protein (DUF2373)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       4.6   8.2e+03      43      51 ..     456     464 ..     455     471 .. 0.81
   2 ?   14.8   1.4     1e-05     0.019       2      45 ..     552     594 ..     551     611 .. 0.91

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 4.6
     DUF2373  43 eYlkglkGg 51 
                 eY+++l G+
  EPX72857.1 456 EYIQDLVGA 464
                 7*****997 PP

  == domain 2  score: 14.8 bits;  conditional E-value: 1e-05
     DUF2373   2 YLiqfykdrsnWKFsKqkQnwLlkhlfdaeeipseyfellleYl 45 
                 YL   ++++++W+F K+  +w ++h  + ++i +ey++  ++Y+
  EPX72857.1 552 YLAGRELKKQSWRFHKKYTTWFQRHE-EPKMITDEYESGTYRYF 594
                 77777899*****************9.99**************9 PP

>> Syntaxin_2  Syntaxin-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   2.4   1.8e-05     0.032      36      94 ..       4      62 ..       2      68 .. 0.94
   2 ?    3.1   0.7     0.066   1.2e+02       4      36 ..     123     153 ..     121     203 .. 0.68

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1.8e-05
  Syntaxin_2 36 helieeinelikktnellkklsqldnsssdsqqklqkekLkkdfkealqeFqkiqrqya 94
                ++l+ ei +++kk+++ +  ++++ ++++ s+   qkekL  d+k+ ++++q++ +q++
  EPX72857.1  4 RKLQVEIEKTFKKVTDGIVIFDEVYEKLNVSTSASQKEKLEGDLKTQIKKLQRLRDQIK 62
                6899**************************9***********************99986 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.066
  Syntaxin_2   4 nlqkinsnvstleklvkqLgtkkdteelreklh 36 
                  +q i+s v +le++v+ L+    te lr  ++
  EPX72857.1 123 TIQWISSAVEELERQVELLEAE--TESLRATFK 153
                 5778888888888888888876..455553333 PP

>> DUF1192  Protein of unknown function (DUF1192)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.7   0.00064       1.1      22      45 ..     131     154 ..     114     160 .. 0.86
   2 ?    1.5   0.3      0.17     3e+02      23      54 ..     166     197 ..     163     199 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00064
     DUF1192  22 veELeerIalLeaEIaRleaaiak 45 
                 veELe  ++lLeaE + l+a+ ++
  EPX72857.1 131 VEELERQVELLEAETESLRATFKR 154
                 9*****************998876 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.17
     DUF1192  23 eELeerIalLeaEIaRleaaiakkkasraAAe 54 
                 +ELe rI++++   +Rle  +++ ++s+ + +
  EPX72857.1 166 SELESRIETHKWHQERLELIMRRLENSQISSD 197
                 7*********9999999988887777765555 PP

>> Cep57_MT_bd  Centrosome microtubule-binding domain of Cep57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.2    0.0002      0.36      35      72 ..      25      62 ..       8      65 .. 0.89
   2 ?   -0.4   2.1      0.89   1.6e+03      11      41 ..     132     162 ..     122     196 .. 0.53

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.0002
  Cep57_MT_bd 35 aaqynaldpslgkrkRkdLaeeleelvkrlEaKadqIy 72
                  + y++l+ s++ +++++L+ +l+  +k+l +  dqI+
   EPX72857.1 25 DEVYEKLNVSTSASQKEKLEGDLKTQIKKLQRLRDQIK 62
                 6779*********************************7 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.89
  Cep57_MT_bd  11 eaLaevlkeLedEfehlklelqelaaqynal 41 
                  e+L++ ++ Le E e l++ +++  + + + 
   EPX72857.1 132 EELERQVELLEAETESLRATFKRGKRDISKQ 162
                  4444444444444444444444444333333 PP

>> Sec34  Sec34-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.9      0.44   7.8e+02      25      75 ..      46      94 ..       5     111 .. 0.60
   2 ?   11.4   2.0   0.00012      0.22      19      87 ..     124     195 ..     118     216 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.44
       Sec34 25 qLeeleekfksvsektsslheaceqlleeqkrleelaeeieekLkyFeeld 75
                +L++  +k ++  ++ ++   a+ + ++++k l e  + ie+k++ F++++
  EPX72857.1 46 DLKTQIKKLQRLRDQIKTW--ASSNDIKDKKALIENRRLIEAKMEEFKAVE 94
                3333333333333333322..233345666666666666666666666665 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00012
       Sec34  19 tdealeqLeeleekfksvsektsslheace...qlleeqkrleelaeeieekLkyFeeldpitrkLnspgss 87 
                 ++ + + +eele +++  +++t+sl+++ +   + +++q++l+el   ie++  + e l+ i+r+L++++ s
  EPX72857.1 124 IQWISSAVEELERQVELLEAETESLRATFKrgkRDISKQTHLSELESRIETHKWHQERLELIMRRLENSQIS 195
                 5667788999999***********99876511167999****************************998876 PP

>> DUF4404  Domain of unknown function (DUF4404)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.8     0.057     1e+02       4      45 ..      53      95 ..      32     110 .. 0.74
   2 ?    7.7   2.8     0.003       5.4       3      63 ..     129     192 ..     127     220 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.057
     DUF4404  4 lLekLheeLe.qnesldeetralLeslaedieellaeedaaae 45
                +L++L+++++   +s d ++++ L + ++ ie+ ++e +a + 
  EPX72857.1 53 KLQRLRDQIKtWASSNDIKDKKALIENRRLIEAKMEEFKAVER 95
                5777777777335566667777777777777777777666655 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.003
     DUF4404   3 elLekLheeLeqnesldeetralLeslaedieellaeedaaaeeee...laerlneaverFeee 63 
                 + +e+L+ ++e  e+  e+ ra+ +  ++di+++ + ++ ++  e+   ++erl+ ++ r e++
  EPX72857.1 129 SAVEELERQVELLEAETESLRATFKRGKRDISKQTHLSELESRIEThkwHQERLELIMRRLENS 192
                 6799***************************999777776666665669********9999976 PP

>> Exonuc_VII_S  Exonuclease VII small subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.68   1.2e+03      19      44 ..       7      32 ..       5      33 .. 0.88
   2 ?    4.3   0.4     0.024        42       4      27 ..     130     153 ..     128     157 .. 0.86
   3 ?    4.4   0.1     0.022        39       6      21 ..     180     195 ..     178     198 .. 0.92
   4 ?   -2.7   0.1       3.5   6.3e+03      18      28 ..     226     236 ..     226     238 .. 0.79

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.68
  Exonuc_VII_S 19 elsLeeslklyeeGvkLlkeCekkLd 44
                  ++++e+ +k++  G+ +  e  +kL+
    EPX72857.1  7 QVEIEKTFKKVTDGIVIFDEVYEKLN 32
                  5789***********99999999986 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.024
  Exonuc_VII_S   4 alaeLeeIvekLEsgelsLeeslk 27 
                   a++eLe  ve LE +  sL   +k
    EPX72857.1 130 AVEELERQVELLEAETESLRATFK 153
                   89*************999987776 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.022
  Exonuc_VII_S   6 aeLeeIvekLEsgels 21 
                   ++Le I ++LE+ ++s
    EPX72857.1 180 ERLELIMRRLENSQIS 195
                   79**********9987 PP

  == domain 4  score: -2.7 bits;  conditional E-value: 3.5
  Exonuc_VII_S  18 gelsLeeslkl 28 
                   ++l+L++s   
    EPX72857.1 226 DDLDLDDSSGI 236
                   59*****9765 PP

>> FliD_N  Flagellar hook-associated protein 2 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.6     0.045        81      29      88 ..      39      99 ..      25     102 .. 0.69
   2 ?    2.9   0.2     0.098   1.7e+02      24      61 ..     118     153 ..     109     166 .. 0.74
   3 ?    3.2   0.3     0.083   1.5e+02      16      60 ..     161     206 ..     157     261 .. 0.68

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.045
                XXXXXHHHHHHHHHHHHHHHHHHHHHXXGGGGGXEEEEECSTTTEEEEEET.TS-SEEEEE CS
      FliD_N 29 klewkqsayrelnsklsnlksalsalsksstfsakkatssdesvvtatass.gaaagsysi 88
                + e+   ++++  +kl+ l++++++ ++s++++ kka  ++  ++ a+ ++ +a++  ++i
  EPX72857.1 39 QKEKLEGDLKTQIKKLQRLRDQIKTWASSNDIKDKKALIENRRLIEAKMEEfKAVEREMKI 99
                4444445556666677777777766677899999999999999999987766677666665 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.098
                 XXXXXXXXXXHHHHHHHHHHHHHHHHHHHHHXXGGGGG CS
      FliD_N  24 eqkktklewkqsayrelnsklsnlksalsalsksstfs 61 
                 ++k+ +++w  sa++el+ +++ l+ ++++l   +tf+
  EPX72857.1 118 KEKHDTIQWISSAVEELERQVELLEAETESL--RATFK 153
                 688999**************99999987655..45554 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.083
                 XXXXXXXXXXXXXXXXXXHHHHHHHHHHHHHHHHHHHHHXX.GGGG CS
      FliD_N  16 erakldkleqkktklewkqsayrelnsklsnlksalsalsk.sstf 60 
                 +++ l +le++ ++ +w q+ ++ +   l+n + +++a+++ ++++
  EPX72857.1 161 KQTHLSELESRIETHKWHQERLELIMRRLENSQISSDAINNiQDDI 206
                 455889999*************999999999888665554444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (623 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1673  (0.0933125); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.72u 0.30s 00:00:01.02 Elapsed: 00:00:00.48
# Mc/sec: 3863.94
//
Query:       EPX72858.1  [L=652]
Description: GTPase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.9e-49  165.8   0.0    1.2e-48  165.3   0.0    1.2  1  GTP_EFTU      Elongation factor Tu GTP binding domain
    1.3e-42  144.3   0.4    3.1e-42  143.1   0.4    1.7  1  LepA_C        GTP-binding protein LepA C-terminus
    2.8e-21   75.3   0.0      7e-21   74.1   0.0    1.7  1  EFG_C         Elongation factor G C-terminus
    5.6e-12   45.9   0.5    1.1e-11   44.9   0.5    1.6  1  GTP_EFTU_D2   Elongation factor Tu domain 2
    7.1e-07   29.2   0.0    1.8e-06   27.9   0.0    1.8  1  EFG_II        Elongation Factor G, domain II
    0.00034   20.7   0.0    0.00068   19.7   0.0    1.5  1  MMR_HSR1      50S ribosome-binding GTPase
     0.0016   17.9   0.0     0.0032   16.9   0.0    1.5  1  SRPRB         Signal recognition particle receptor beta subun
     0.0017   18.0   0.0     0.0032   17.1   0.0    1.4  1  Ras           Ras family
     0.0031   17.3   0.0      0.006   16.4   0.0    1.4  1  RF3_C         Class II release factor RF3, C-terminal domain
  ------ inclusion threshold ------
      0.035   14.1   0.0      0.082   12.9   0.0    1.6  1  MMR_HSR1_Xtn  C-terminal region of MMR_HSR1 domain
       0.12   12.6   0.0       0.44   10.8   0.0    2.0  2  Roc           Ras of Complex, Roc, domain of DAPkinase


Domain annotation for each model (and alignments):
>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.3   0.0   7.1e-52   1.2e-48       2     193 ..      57     234 ..      56     235 .. 0.93

  Alignments for each domain:
  == domain 1  score: 165.3 bits;  conditional E-value: 7.1e-52
                 CEEEEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHHHHHSTHCHSHHHHHHTSCSSCEEEEEE..TTCSSEEEEEEEESSSGGGHHHHHHHHHT-SEEE CS
    GTP_EFTU   2 rirnigiighvDhGKtTLtdrLlyktgaiskkgekaeeervlDtlkeErergiTiksaaisle..ketkkylinliDtPGHvdFskevirglrvlDgav 98 
                 +irn ++i+h+DhGK+TL+d+Ll+ tg i+k+++k+   ++lD+l+ Er+rgiT+k++++s+    + k yl+nliDtPGHvdF +ev ++l++++g++
  EPX72858.1  57 QIRNWAVIAHIDHGKSTLSDCLLKLTGVIDKNNAKN---QFLDKLAVERRRGITVKAQTCSMIyhYQNKPYLLNLIDTPGHVDFREEVMHSLAACEGCI 152
                 79*****************************55544...59********************996449******************************** PP

                 EEEETTTBSTHHHHHHHHHHHHTTTEEEEEEESCGSTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEBTTTTBTHHHHHHHHHHHSH CS
    GTP_EFTU  99 lvvdaveGvepqteevlrlalkegvpiivfiNKmDrlkaelkeiveevkqklsrkeeklekygekgekevpvvfgSalkgegvktllealvellp 193
                 l+vda++G+++qt  ++++a ++++ +  ++NK+D + a+++++ ++++q++     +l             +f+S+++g +v+++l  +v+ +p
  EPX72858.1 153 LLVDASQGIQAQTLSNFYMAFAQNLVVLPVLNKVDLPTADVEKTLNQIEQTF-----EL---D-----VSDTLFISSKSGTNVEKILPEIVHRFP 234
                 ****************************************************.....22...2.....34589*************999998776 PP

>> LepA_C  GTP-binding protein LepA C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.1   0.4   1.9e-45   3.1e-42       1     106 [.     541     646 ..     541     647 .. 0.99

  Alignments for each domain:
  == domain 1  score: 143.1 bits;  conditional E-value: 1.9e-45
                 ESSCB-GGG-EEEETTTHHHHHHHHHHHHHHHS---SS-EEEEEEETTEEEEEEEE----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
      LepA_C   1 ingekvdaLslivhrskaeergrklvekLkeliprqlfevaiqaaigskviaretikalrkdvlaklyggditrkkKllekqkegkkrlkkignveipq 99 
                 +ng++vdaL+++vhrs a +rgr+++++L+el+p+ql+evaiqa+++skv+ar++i alrk+v+ak+yggd trk+Kll+kqkegk rl++++nv+i++
  EPX72858.1 541 VNGQSVDALCTVVHRSLALNRGREWINRLRELLPKQLYEVAIQAVVESKVLARQNIAALRKNVTAKCYGGDWTRKQKLLNKQKEGKSRLRQSSNVSIDK 639
                 7************************************************************************************************** PP

                 XXXXXXX CS
      LepA_C 100 eaflavl 106
                 ++f++++
  EPX72858.1 640 SVFYQFM 646
                 ***9986 PP

>> EFG_C  Elongation factor G C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.1   0.0   4.3e-24     7e-21       3      86 ..     453     537 ..     451     540 .. 0.96

  Alignments for each domain:
  == domain 1  score: 74.1 bits;  conditional E-value: 4.3e-24
                 EEEEEEEEEEEECCCCCCHHHHHHHCT-EEEEEEEE.TTEEEEEEEEEGGG-T.THHHCHHHCTTTS-EEEEEEEEEEE--HHHH CS
       EFG_C   3 lEPivkveievpeeyvgkvisdlssrrGeiedmeqdasgrviieaeiPlaeli.gfateLrslTkGegsfsmefsgYeevpgdkl 86 
                  EPiv+++i++p+ey+g+vi++++s rG++ed++  +++r++++++iPla+l+ +f+ +L+  T+G++++++e +gY++++ +kl
  EPX72858.1 453 FEPIVEATIIIPSEYLGDVIKLCESCRGIQEDCTFLSETRCMLKYHIPLAHLVeDFFGRLKGQTSGYATLDYEDAGYAPTDIVKL 537
                 7******************************************************************************998776 PP

>> GTP_EFTU_D2  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.9   0.5     7e-15   1.1e-11       1      74 []     258     328 ..     258     328 .. 0.97

  Alignments for each domain:
  == domain 1  score: 44.9 bits;  conditional E-value: 7e-15
                  EEEEEEEEEESEEETTEEEEEECTCTTSEEEEEEEEEEEEETEEESEEETTSEEEEEEEESSCCSGSSTTCEEE CS
  GTP_EFTU_D2   1 GtvalgrvysGtlkkGdevrilgndtskkeivtrissletfhededeavaganaGvivaikgledaiivGdtlt 74 
                  G+++l+r+++GtlkkG++++   + t++k +v +++ ++  + +  e++ag++++v  ++k++++a i+Gdt+t
   EPX72858.1 258 GVISLVRLMDGTLKKGQKLMS--VNTGRKYEVQQVGIMYPDMTETAELRAGQVGYVVSNMKNIDEA-IIGDTFT 328
                  899******************..99****************************************8.*****85 PP

>> EFG_II  Elongation Factor G, domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   0.0   1.1e-09   1.8e-06       1      70 [.     342     414 ..     342     419 .. 0.89

  Alignments for each domain:
  == domain 1  score: 27.9 bits;  conditional E-value: 1.1e-09
      EFG_II   1 fPePvislaiepkskadedklskaLarlleEDptlrverdeeTk...etilsGmGelHleivverlkreykve 70 
                 +P+P++++   p++++d ++l++ +++l+  D +++ve+++ +     + l  +G+lHl + verl+ ey+ +
  EPX72858.1 342 VPKPMVFVGAFPTDSSDFERLNDCIEQLTLNDRSIHVEKETSSAlgmGWRLGFLGTLHLSVFVERLQDEYDRK 414
                 7**********************************9999888853335678899****************865 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   4.1e-07   0.00068       8     101 ..      67     170 ..      60     185 .. 0.66

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 4.1e-07
                 TTSSHHHHHHHHHT...............STEEESSSTTSSSSEEEEEEE...ETTEE....EEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEE CS
    MMR_HSR1   8 pNvGKStLinaltg...............ekaivsdkpgtTrdinegrvk...lkgke....ielvDtpGliegaseekglgkaflaleeadlillvvd 84 
                    GKStL   l++               +k  v+++ g T + ++  +        +    ++l+DtpG ++        ++ +++l  ++  +l+vd
  EPX72858.1  67 IDHGKSTLSDCLLKltgvidknnaknqflDKLAVERRRGITVKAQTCSMIyhyQ---NkpylLNLIDTPGHVD------FREEVMHSLAACEGCILLVD 156
                 567*********9666677777777655458899*********99998774432...223449*******666......234444445569******** PP

                 TTTTCSHHHHHHHHHHH CS
    MMR_HSR1  85 aseeklkpldeeleell 101
                 as++ +++  ++l ++ 
  EPX72858.1 157 ASQG-IQA--QTLSNFY 170
                 9944.633..4555443 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0     2e-06    0.0032      16      86 ..      91     158 ..      81     205 .. 0.83

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 2e-06
                 HHHHHHHHHHS.S---B---SS-EEETTG...GGTT-SEEEETT-GCCSHHHHHHHHHHGGEEEEEEEEETT CS
       SRPRB  16 KTslftrLttd.svkktvtSqessaalkvksekgskltliDfPGheklrqklleklkaksslkglvfvvDSt 86 
                 K  ++ +L  +     tv +q  s+ +++ ++k   l+liD PGh+ +r +++++    +   g + +vD++
  EPX72858.1  91 KNQFLDKLAVErRRGITVKAQTCSMIYHY-QNKPYLLNLIDTPGHVDFREEVMHS---LAACEGCILLVDAS 158
                 66777888777355678999999999999.88999*****************998...56677888888865 PP

>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0     2e-06    0.0032      29     158 ..     105     231 ..      85     234 .. 0.76

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 2e-06
                 TTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHHHSTTTSEEEEEEETTTGGGG-SS-HH.H CS
         Ras  29 esTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeikrvaeenvpivLvGnKvDleekravste.e 126
                   T+ ++  +   ++++k + l++ DT G  +f++    ++  +eg++l+ d ++    +++++++  +     +n++++ v nKvDl +   v+++ +
  EPX72858.1 105 GITVKAQTCSMIYHYQNKPYLLNLIDTPGHVDFREEVMHSLAACEGCILLVDASQGIQAQTLSNFYMAFA----QNLVVLPVLNKVDLPT-ADVEKTlN 198
                 4578778888888999**********************************99988887777777776554....467788899*****98.44443302 PP

                 HHHHHHHHT.SEEEEEBTTTTCTHHHHHHHHHH CS
         Ras 127 geelakelg.lkfletSAktnenveeafeellr 158
                   e   el+    l +S k+ +nve+++ e+++
  EPX72858.1 199 QIEQTFELDvSDTLFISSKSGTNVEKILPEIVH 231
                 22223333324556679*********9999987 PP

>> RF3_C  Class II release factor RF3, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   3.7e-06     0.006       8      80 ..     344     419 ..     335     443 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 3.7e-06
                 --SEEEEEEESSGGGHHHHHHHHHHHH.HCTSSEEEEET.TS..S-EEEEESSTHHHHHHHHHHHHHH---EEEEE CS
       RF3_C   8 aPElfarvrlkdplkrkqlrkgleqLa.eEGavqvfkeeeag..eelilgaVGqLQfeVveeRlknEYgvevrles 80 
                  P +f     +d++   +l+  +eqL+ +   ++v ke+++     + lg +G+L + V+ eRl++EY+ ++ ++s
  EPX72858.1 344 KPMVFVGAFPTDSSDFERLNDCIEQLTlNDRSIHVEKETSSAlgMGWRLGFLGTLHLSVFVERLQDEYDRKLVITS 419
                 37889999999***************835567888877665554669*********************98877665 PP

>> MMR_HSR1_Xtn  C-terminal region of MMR_HSR1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0     5e-05     0.082      58     100 ..     179     229 ..     151     233 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 5e-05
  MMR_HSR1_Xtn  58 clyvlNKiDlisleeldelare........pnsvviSaekelnldeLkeki 100
                   +l vlNK+Dl + +  ++l++         +++++iS+++++n+++++ +i
    EPX72858.1 179 VLPVLNKVDLPTADVEKTLNQIeqtfeldvSDTLFISSKSGTNVEKILPEI 229
                   6779******6655555554433347788789**************99887 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00027      0.44      32     119 ..     104     187 ..      86     188 .. 0.82
   2 ?   -3.6   0.0       7.7   1.3e+04      86     108 ..     553     575 ..     546     582 .. 0.68

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00027
                 TTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEEGHHHHCHHHHHHHHHHHCSSS-EEEEEE-TT CS
         Roc  32 igvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvydsrssenlkeWlkelkkvagkspvilvgnkiD 119
                  g++++ ++++ i +++n    k + ln+ Dt G+ +fr+   + l + + +il++d+++  ++++  +   + a++ +v+ v nk+D
  EPX72858.1 104 RGITVKAQTCSMIYHYQN----KPYLLNLIDTPGHVDFREEVMHSLAACEGCILLVDASQGIQAQTLSNFYMAFAQNLVVLPVLNKVD 187
                 577777777766655443....5789**************999999***********9998888888888888999999999****99 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 7.7
                 EEEGHHHHCHHHHHHHHHHHCSS CS
         Roc  86 vydsrssenlkeWlkelkkvagk 108
                 v  s   ++ +eW++ l++  +k
  EPX72858.1 553 VHRSLALNRGREWINRLRELLPK 575
                 444445567789**999987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (652 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       607  (0.0338558); expected 358.6 (0.02)
Passed bias filter:                      523  (0.0291706); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.61u 0.25s 00:00:00.86 Elapsed: 00:00:00.41
# Mc/sec: 4716.13
//
Query:       EPX72859.1  [L=356]
Description: cyclophilin family peptidyl-prolyl cis-trans isomerase Wis2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.8e-47  159.9   0.3    8.7e-47  159.3   0.3    1.3  1  Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans iso
    1.6e-06   27.7  11.4      0.002   17.9   0.5    3.7  3  TPR_1          Tetratricopeptide repeat
    6.4e-05   22.8  13.3       0.06   13.5   0.5    3.9  4  TPR_2          Tetratricopeptide repeat
    0.00093   19.2   9.7     0.0034   17.5   0.3    3.3  4  TPR_8          Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.016   15.5   5.5        0.2   12.0   0.8    3.3  3  TPR_12         Tetratricopeptide repeat
      0.023   15.3   1.0        6.3    7.5   0.1    2.7  3  TPR_16         Tetratricopeptide repeat
      0.093   12.5   0.7        5.1    6.8   0.2    2.2  2  DUF1955        Domain of unknown function (DUF1955)
       0.27   12.0   1.6      1e+02    3.9   0.3    4.1  4  TPR_6          Tetratricopeptide repeat
       0.67    9.7   5.7       0.29   10.8   0.2    2.8  3  TPR_11         TPR repeat
        4.5    7.5   5.6    1.3e+02    2.9   0.1    4.0  4  TPR_7          Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.3   0.3   4.8e-50   8.7e-47       5     157 ..      10     165 ..       6     166 .. 0.88

  Alignments for each domain:
  == domain 1  score: 159.3 bits;  conditional E-value: 4.8e-50
  Pro_isomerase   5 etss..kGrivieLfadkaPktvenFlklvkeg........fYdgttFhRvikgfmvqgGdptgktsageqe.kkggesiraipdEitsklkh.kr 88 
                    ++++  + ++ +eLf++ +Pktv+nF  l+ +g        +Y+g++FhRvik+fm+qgGd+t ++  g++  +  g   ++++dE+ ++lkh k+
     EPX72859.1  10 SIDKkvQPTVYFELFENVVPKTVKNFASLC-DGferdgrklTYKGSRFHRVIKQFMLQGGDFTRGN--GTGGeSIYG---EKFEDEN-FELKHdKP 98 
                    55444466899*******************.6777788888********************99984..443323333...69*****.89999899 PP

  Pro_isomerase  89 GalamartgkepnsagsqFfItlkeaphldgkytvFGkVveGmdvvekiekvetdeerpkknvkivsae 157
                    ++l+ma++g  pn++gsqFfIt+  +phldgk++vFG+Vv G  +v++ie++et+++ p+ +v+i++++
     EPX72859.1  99 FLLSMANAG--PNTNGSQFFITTVRTPHLDGKHVVFGRVVGGKSTVRAIENLETSSDDPVVPVVIEECG 165
                    *******98..8*******************************************************97 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.2   0.00049      0.88       5      29 ..     208     232 ..     207     233 .. 0.92
   2 !    6.0   0.7    0.0063        11       3      21 ..     261     279 ..     259     281 .. 0.91
   3 !   17.9   0.5   1.1e-06     0.002       2      27 ..     298     323 ..     298     323 .. 0.95

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00049
                 HHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_1   5 ynlGnayfklgkydeAleyyekALe 29 
                 + +Gn+ f ++++d A++  +kAL+
  EPX72859.1 208 KKIGNTQFAQQNLDLAVAKWQKALR 232
                 569********************96 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.0063
                 HHHHHHHHHHHTT-HHHHH CS
       TPR_1   3 alynlGnayfklgkydeAl 21 
                  + n++++ +k+++ +eA+
  EPX72859.1 261 LYLNIALIALKQNNAKEAI 279
                 699***************9 PP

  == domain 3  score: 17.9 bits;  conditional E-value: 1.1e-06
                 HHHHHHHHHHHHTT-HHHHHHHHHHH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekA 27 
                 ka+y+lG a+  l++++eA+e+  kA
  EPX72859.1 298 KAYYRLGSAHGILKNFNEAEEFLGKA 323
                 79*******************99887 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0         8   1.4e+04      27      34 .]     183     190 ..     182     190 .. 0.83
   2 !   11.5   0.4   0.00015      0.27       5      30 ..     208     233 ..     204     237 .. 0.90
   3 ?    5.4   0.3     0.013        23       3      22 ..     261     280 ..     259     281 .. 0.91
   4 !   13.5   0.5   3.4e-05      0.06       2      27 ..     298     323 ..     297     324 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 8
       TPR_2  27 AleldPnn 34 
                 Ale +P++
  EPX72859.1 183 ALEEYPDD 190
                 89999986 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 0.00015
       TPR_2   5 ynlGlayyklgdyeeAleafekAlel 30 
                   +G+  +++++++ A++ ++kAl++
  EPX72859.1 208 KKIGNTQFAQQNLDLAVAKWQKALRY 233
                 578*********************86 PP

  == domain 3  score: 5.4 bits;  conditional E-value: 0.013
       TPR_2   3 alynlGlayyklgdyeeAle 22 
                 ++ n++l+++k+++ +eA++
  EPX72859.1 261 LYLNIALIALKQNNAKEAIR 280
                 6899**************96 PP

  == domain 4  score: 13.5 bits;  conditional E-value: 3.4e-05
       TPR_2   2 ealynlGlayyklgdyeeAleafekA 27 
                 +a+y+lG a+  l++++eA+e++ kA
  EPX72859.1 298 KAYYRLGSAHGILKNFNEAEEFLGKA 323
                 79********************9998 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       2.8   4.9e+03       7      22 ..     210     225 ..     209     232 .. 0.81
   2 !    6.8   0.4    0.0051       9.1       2      21 ..     260     279 ..     259     281 .. 0.92
   3 !   17.5   0.3   1.9e-06    0.0034       2      27 ..     298     323 ..     297     323 .. 0.95
   4 ?   -3.2   0.1         8   1.4e+04       7      19 ..     333     345 ..     332     347 .. 0.71

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 2.8
                 HHHHHHHTT-HHHHHH CS
       TPR_8   7 lgsiylklgdyeeAke 22 
                 +g++ + +++++ A++
  EPX72859.1 210 IGNTQFAQQNLDLAVA 225
                 8999999999999986 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0051
                 CHHHHHHHHHHHTT-HHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAk 21 
                 ++y+n+++i lk+++ +eA+
  EPX72859.1 260 SLYLNIALIALKQNNAKEAI 279
                 68*****************8 PP

  == domain 3  score: 17.5 bits;  conditional E-value: 1.9e-06
                 CHHHHHHHHHHHTT-HHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyeka 27 
                 +ayy+lgs++  l++++eA+e++ ka
  EPX72859.1 298 KAYYRLGSAHGILKNFNEAEEFLGKA 323
                 79********************9887 PP

  == domain 4  score: -3.2 bits;  conditional E-value: 8
                 HHHHHHHTT-HHH CS
       TPR_8   7 lgsiylklgdyee 19 
                 l+ + ++++dy++
  EPX72859.1 333 LAEVRQQKQDYKK 345
                 6667778888876 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.1     0.052        93       8      31 ..     209     232 ..     202     237 .. 0.80
   2 ?   12.0   0.8   0.00011       0.2       5      71 ..     261     323 ..     258     323 .. 0.87
   3 ?   -0.5   0.0      0.86   1.5e+03       7      20 ..     331     344 ..     326     345 .. 0.79

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.052
      TPR_12   8 nlaavlrrlgrydeAlellekale 31 
                 +++++ ++++++d A +  +kal+
  EPX72859.1 209 KIGNTQFAQQNLDLAVAKWQKALR 232
                 578888889999999988888885 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 0.00011
      TPR_12   5 alnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleea 71 
                 ++ n+a++ +++ +  eA+++ + ++++     G + ++   +++ Lg ++  l+++ eA+e+l +a
  EPX72859.1 261 LYLNIALIALKQNNAKEAIRNSDIVVNAD----GATELEKQKAYYRLGSAHGILKNFNEAEEFLGKA 323
                 6779*********************9999....444555667********************99776 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.86
      TPR_12   7 nnlaavlrrlgryd 20 
                  +la+v ++ ++y 
  EPX72859.1 331 KKLAEVRQQKQDYK 344
                 47999999999997 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.1    0.0035       6.3       4      34 ..     211     241 ..     209     242 .. 0.90
   2 ?    2.4   0.0      0.14   2.6e+02      36      54 ..     261     279 ..     253     281 .. 0.74
   3 ?    5.4   0.1     0.016        28       1      57 [.     263     320 ..     263     328 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0035
      TPR_16   4 araalragdyddAaaaleaalkrdpssPdaa 34 
                 ++  +++++ d A+a ++ al++ +++P++ 
  EPX72859.1 211 GNTQFAQQNLDLAVAKWQKALRYLAEHPVRN 241
                 78899*******************9999875 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.14
      TPR_16  36 AllllgdaalrqgrlaeAa 54 
                  +l+ +++al+q++ +eA+
  EPX72859.1 261 LYLNIALIALKQNNAKEAI 279
                 6777888888888888886 PP

  == domain 3  score: 5.4 bits;  conditional E-value: 0.016
      TPR_16   1 lalaraalragdyddAaaaleaalkrdpssPd.aaeAllllgdaalrqgrlaeAaaly 57 
                 l+ a++al++++  +A++  ++++ +d+ + +    A++ lg a+  ++++ eA++++
  EPX72859.1 263 LNIALIALKQNNAKEAIRNSDIVVNADGATELeKQKAYYRLGSAHGILKNFNEAEEFL 320
                 5789999**********99999999888777778899999999999999988888765 PP

>> DUF1955  Domain of unknown function (DUF1955)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.024        43     103     145 ..     182     224 ..     178     231 .. 0.82
   2 ?    6.8   0.2    0.0028       5.1      84     152 ..     258     332 ..     254     339 .. 0.78

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.024
                 HHHHHHHHHH---S-HHHHHHHHHHHHHTT-HHHHHHHHHHHH CS
     DUF1955 103 dqldkilkelkneikaelllkianalkklgdereanellkkac 145
                 d l++   + + + +   ++kia  lkk+g+++ a++ l  a 
  EPX72859.1 182 DALEEYPDDYEGDKSETAVFKIAGDLKKIGNTQFAQQNLDLAV 224
                 6788888888777888999*************99998777665 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0028
                 ---HHHHHHHHHHHHTT-HHHHH..HHHHHH..---.S-HHHHHHHHHHHHHTT-HHHHHHHHHHHH.HTT-HHH CS
     DUF1955  84 klseyvdlaldvlvkkgkkdqld..kilkel..kne.ikaelllkianalkklgdereanellkkac.ekGikea 152
                 k+s y+++al +l +++ k+ +   +i+ +     e  k +  +++++a   l++  ea+e+l ka  + G+ + 
  EPX72859.1 258 KYSLYLNIALIALKQNNAKEAIRnsDIVVNAdgATElEKQKAYYRLGSAHGILKNFNEAEEFLGKAGnDAGVAKK 332
                 6899***************988522565555556665788899********************999624566655 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       2.8   5.1e+03      26      32 ..     183     189 ..     179     190 .. 0.82
   2 ?    3.9   0.3     0.057     1e+02       5      28 ..     209     232 ..     209     235 .. 0.88
   3 ?    2.8   0.0      0.12   2.2e+02       3      21 ..     262     280 ..     259     287 .. 0.89
   4 ?    0.4   0.0      0.73   1.3e+03       2      23 ..     299     320 ..     298     326 .. 0.69

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 2.8
                 HHHH-TT CS
       TPR_6  26 likeYPd 32 
                  ++eYPd
  EPX72859.1 183 ALEEYPD 189
                 689***9 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.057
                 HHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   5 klalsyrklgdtdkAlealerlik 28 
                 k++  ++++++ d A++ +++ ++
  EPX72859.1 209 KIGNTQFAQQNLDLAVAKWQKALR 232
                 68999***88*******9999876 PP

  == domain 3  score: 2.8 bits;  conditional E-value: 0.12
                 HHHHHHHHHHHHHHHHHHH CS
       TPR_6   3 lyklalsyrklgdtdkAle 21 
                 ++++al  +k++++ +A++
  EPX72859.1 262 YLNIALIALKQNNAKEAIR 280
                 699********9****986 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.73
                 HHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   2 AlyklalsyrklgdtdkAleal 23 
                 A+y+l+ ++  l++  +A e l
  EPX72859.1 299 AYYRLGSAHGILKNFNEAEEFL 320
                 8999998886445666666655 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.2   0.00016      0.29       1      23 [.     211     233 ..     211     236 .. 0.94
   2 ?   -3.1   0.1       3.8   6.8e+03      21      28 ..     268     275 ..     262     279 .. 0.67
   3 ?    0.4   0.1       0.3   5.4e+02      30      38 ..     299     307 ..     297     308 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00016
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkl 23 
                 G+  ++q++++ A+++++kAl++
  EPX72859.1 211 GNTQFAQQNLDLAVAKWQKALRY 233
                 8999****************985 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 3.8
      TPR_11  21 lkldPdna 28 
                 ++l+++na
  EPX72859.1 268 IALKQNNA 275
                 55666665 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.3
      TPR_11  30 ayynLGlay 38 
                 ayy LG a+
  EPX72859.1 299 AYYRLGSAH 307
                 899999886 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.1      0.25   4.4e+02      13      22 ..     225     234 ..     207     239 .. 0.55
   2 ?    2.9   0.1     0.074   1.3e+02       2      20 ..     262     280 ..     261     281 .. 0.93
   3 ?    2.6   0.0     0.095   1.7e+02       1      27 [.     299     323 ..     299     328 .. 0.89
   4 ?   -0.8   0.0       1.1     2e+03       5      17 ..     333     345 ..     331     345 .. 0.89

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.25
       TPR_7  13 GdyeeAiely 22 
                  ++++A++++
  EPX72859.1 225 AKWQKALRYL 234
                 3455555554 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.074
       TPR_7   2 LlnLarlysrlGdyeeAie 20 
                 +ln+a +  ++++ +eAi+
  EPX72859.1 262 YLNIALIALKQNNAKEAIR 280
                 89***************96 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.095
       TPR_7   1 aLlnLarlysrlGdyeeAielyeqsLa 27 
                 a+++L++++  l ++ eA+e++ +  a
  EPX72859.1 299 AYYRLGSAHGILKNFNEAEEFLGK--A 323
                 7999*****9999*******9988..5 PP

  == domain 4  score: -0.8 bits;  conditional E-value: 1.1
       TPR_7   5 LarlysrlGdyee 17 
                 La+++++ +dy++
  EPX72859.1 333 LAEVRQQKQDYKK 345
                 899999****986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       700  (0.0390429); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2696.11
//
Query:       EPX72860.1  [L=111]
Description: Elf1 family transcription elongation factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.6e-29  100.3   1.8    5.5e-29  100.0   1.8    1.1  1  Elf1      Transcription elongation factor Elf1 like


Domain annotation for each model (and alignments):
>> Elf1  Transcription elongation factor Elf1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.0   1.8   3.1e-33   5.5e-29       1      77 [.       2      78 ..       2      79 .. 0.94

  Alignments for each domain:
  == domain 1  score: 100.0 bits;  conditional E-value: 3.1e-33
        Elf1  1 gkRkkkakkrkkkkkkklptkFdCpfCnheksvevkldkkekiaevsCkvCgesfetkvnalsepvDvYskwiDace 77
                gkRk ++  r+ +++ +l+t+F+C+fCnheksv+++ldk++++++++Ck+Cg+s ++ ++als+p+DvYs+wiDac+
  EPX72860.1  2 GKRKASKRVRPTRRAAPLETTFTCLFCNHEKSVSCTLDKQSGVGNLHCKICGQSHQCIITALSAPIDVYSDWIDACD 78
                89**9555678888888***********************************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       558  (0.0311228); expected 358.6 (0.02)
Passed bias filter:                      272  (0.015171); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.29s 00:00:00.71 Elapsed: 00:00:00.46
# Mc/sec: 721.55
//
Query:       EPX72861.1  [L=219]
Description: uracil phosphoribosyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-77  260.2   0.0    1.2e-77  260.0   0.0    1.0  1  UPRTase       Uracil phosphoribosyltransferase
     0.0018   17.8   0.0     0.0023   17.4   0.0    1.2  1  Pribosyltran  Phosphoribosyl transferase domain


Domain annotation for each model (and alignments):
>> UPRTase  Uracil phosphoribosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  260.0   0.0   1.3e-81   1.2e-77       3     207 .]      15     217 ..      12     217 .. 0.99

  Alignments for each domain:
  == domain 1  score: 260.0 bits;  conditional E-value: 1.3e-81
     UPRTase   3 shpllkakltilRdastsrkdfrelvdriarllaeealsallpveevtvttplgkeysgelldeekialVpilRaGegmeealrellpearvghlglqr 101
                 ++++lk+++ti+Rd++ +r++f ++++ri+rl++ee l++ lpv++ +vtt ++ + +g+++d  +i++V+i+RaGe+me++lr++++++r+g++++qr
  EPX72861.1  15 QTNQLKGLFTIIRDRTKPRSEFIFYANRIIRLIVEEGLNH-LPVSPAQVTTAQNVKFDGVVFDG-RICGVSIMRAGESMEQGLRDCCRSVRIGKILIQR 111
                 89**************************************.**********************8.********************************** PP

     UPRTase 102 eeetlepveyynkLPkkiaertvlllDpviaTGgsaaaaiqlLkergvgeekIlvlsvlaseegvkrlaeefpkvkvvtaavDeeldekgyivpGlGDf 200
                 +ee++epv++++kLP++ia+r+vlllDp++aTGgsa+ a+++L++ g+++e+I++l+v+as+eg+++++++fp++++vta +De+ld+kgyi pGlGDf
  EPX72861.1 112 DEESQEPVLHFKKLPDDIADRYVLLLDPMLATGGSAMCAMDVLISMGCKQEQIIFLNVIASPEGLNNVHQRFPNIRIVTAVIDEGLDDKGYITPGLGDF 210
                 *************************************************************************************************** PP

     UPRTase 201 GDRlFgT 207
                 GD +FgT
  EPX72861.1 211 GDIYFGT 217
                 ******9 PP

>> Pribosyltran  Phosphoribosyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   2.6e-07    0.0023      79     133 ..     118     179 ..      85     198 .. 0.83

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 2.6e-07
                   ......EE----TTSEEEEE-SEESSSHHHHHHHHHHHCC-BS..EEEEEEEEE-HHHHHHH CS
  Pribosyltran  79 s.....rlledpagkkVliVDDildtGgTllaalelLkekgpe..evriavlvdkpateeev 133
                   +     +l+ d+a++ Vl+ D +l+tGg+   a++ L + g++  ++++  +++ p++  +v
    EPX72861.1 118 PvlhfkKLPDDIADRYVLLLDPMLATGGSAMCAMDVLISMGCKqeQIIFLNVIASPEGLNNV 179
                   1333446999*******************999***********9999999999999887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       314  (0.0175135); expected 358.6 (0.02)
Passed bias filter:                      297  (0.0165653); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.44
# Mc/sec: 1487.14
//
Query:       EPX72862.1  [L=74]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00013   21.7   0.0     0.0002   21.1   0.0    1.4  1  B12D      NADH-ubiquinone reductase complex 1 MLRQ subunit


Domain annotation for each model (and alignments):
>> B12D  NADH-ubiquinone reductase complex 1 MLRQ subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0   1.1e-08    0.0002       4      60 ..      20      70 ..      17      74 .] 0.80

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 1.1e-08
        B12D  4 eliPLfvfigagvggavfylvRllltnPDVrwnkknnpepWnklknnkegkfysenr 60
                el PL   ig +++ a+f + + l+ +P++r    ++p+  + +++ ++   +s nr
  EPX72862.1 20 ELKPLAILIGTAGCTAIFTMGYKLTADPEIR----RRPS--WTIQEQQQRDTVSGNR 70
                899***************************8....5555..5555566666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       333  (0.0185733); expected 358.6 (0.02)
Passed bias filter:                      302  (0.0168442); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.41
# Mc/sec: 546.09
//
Query:       EPX72863.1  [L=456]
Description: AAA family ATPase Rvb1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   1.3e-169  564.0   0.1   1.6e-169  563.7   0.1    1.1  1  TIP49         TIP49 P-loop domain
    4.4e-24   84.4   0.2    9.9e-24   83.3   0.2    1.7  1  TIP49_C       TIP49 AAA-lid domain
    6.1e-09   36.4   0.3      5e-05   23.7   0.1    2.6  2  AAA           ATPase family associated with various cellular 
    7.8e-08   32.2   0.1     0.0003   20.5   0.0    2.4  2  RuvB_N        Holliday junction DNA helicase RuvB P-loop doma
    0.00082   19.7   0.1        0.2   11.9   0.0    2.4  2  AAA_22        AAA domain
  ------ inclusion threshold ------
      0.014   15.7   0.1       0.13   12.6   0.1    2.2  1  AAA_16        AAA ATPase domain
      0.038   13.2   0.0      0.061   12.6   0.0    1.3  1  DUF2075       Uncharacterized conserved protein (DUF2075)
      0.043   14.2   2.0        8.2    6.8   0.0    2.4  2  AAA_19        AAA domain
      0.049   13.9   0.1      0.098   12.9   0.1    1.5  1  AAA_28        AAA domain
      0.049   13.0   0.1        6.5    6.1   0.0    2.3  2  Mg_chelatase  Magnesium chelatase, subunit ChlI
       0.08   12.9   0.1         14    5.6   0.0    2.5  2  AAA_5         AAA domain (dynein-related subfamily)


Domain annotation for each model (and alignments):
>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  563.7   0.1  9.9e-173  1.6e-169       1     351 []      15     370 ..      15     370 .. 0.99

  Alignments for each domain:
  == domain 1  score: 563.7 bits;  conditional E-value: 9.9e-173
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49   1 rislhshikgLGldedgeaekeeeglvGqkkareaagvivelikekklaGravLlaGpsgtGktalaiaiskelgedvpfvalsgsevyslevkktevl 99 
                 ri++hshikgLGl+edg++e   +g++Gq +area+gvi++lik+kk++Gr+vL+aG +gtGktal +ai++elg +vpf+ ++gsevys+e+kkte+l
  EPX72863.1  15 RITTHSHIKGLGLKEDGTCEGIGGGFIGQDNAREACGVIIDLIKSKKFGGRGVLFAGGAGTGKTALGLAIAQELGPKVPFCPMVGSEVYSSEIKKTEAL 113
                 799************************************************************************************************ PP

                 XXXXXXXXXXXXXX-S-EEEEEEEEEEE...-SSS-...TTS--EEEEEE-SS-EEEEEE-HHHHHHHHHHT--TT-EEEEETTT--EEE-SSS-SS-- CS
       TIP49 100 tqalrksigvrikeekevleGevveleveeaenpls.kekkikevkitlktakeekklklgskiaeellkekvkegDviviekesGkvkklGrsearak 197
                 ++++r++ig+r+ke+kev+eGev+el +eeaenpl+ ++k+i++v++ lkt+ ++k+lkl+++i+e+l+ke+v++gDvi+ie+++G+vk++Grs+a+a+
  EPX72863.1 114 MENFRRAIGLRVKETKEVYEGEVTELVPEEAENPLGgYGKTISHVILGLKTHRGTKQLKLDPSIYESLQKEQVSTGDVIYIEANTGAVKRVGRSDAYAT 212
                 ************************************9************************************************************** PP

                 ----S--------S---S----XXXXXXXXXXXXXXXXX...XXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49 198 efDiekdefvelPkGevekkkevvqevtLhdlDvanarp...qdllslllqllkskkteiteklreeinkkvakyveegkaeivpGvlfiDevhmlDie 293
                 e+D+e++e+v++PkGev+k+ke+vq+vtLhdlDvanarp   qd++s++ ql+k+kkteit+klr+eink+v++y+e+g+ae++pGvlfiDevhmlDie
  EPX72863.1 213 EYDLEAEEYVPMPKGEVHKRKEIVQDVTLHDLDVANARPqggQDIMSMMGQLMKPKKTEITDKLRSEINKVVNRYIEQGIAELIPGVLFIDEVHMLDIE 311
                 ***************************************9999******************************************************** PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49 294 cfsylnraleselaPivilatnrgiakirGt.diisphGipvDlldrlliiktekytke 351
                 cf+yln+ales+++Pivi+a+nrg+++irGt di++phGip+Dlldrlli++t +yt+e
  EPX72863.1 312 CFTYLNQALESTISPIVIFASNRGMCTIRGTeDIQAPHGIPTDLLDRLLIVRTLPYTEE 370
                 *******************************99***********************985 PP

>> TIP49_C  TIP49 AAA-lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.3   0.2   6.1e-27   9.9e-24       1      66 []     375     440 ..     375     440 .. 1.00

  Alignments for each domain:
  == domain 1  score: 83.3 bits;  conditional E-value: 6.1e-27
     TIP49_C   1 IlkiRakeEgvkldeeAldlLakigtetSLRYaiqLltpasilakkrkkkevevedveeveeLFlD 66 
                 Il+iR k+E++kl+  +ld+Lak g+++SLRY+iqLltpasi+a+++ ++e+ ve++ e+++LFlD
  EPX72863.1 375 ILEIRGKVENIKLSAACLDKLAKEGVKSSLRYVIQLLTPASIIANLHSSEEIGVEHIDECYDLFLD 440
                 9****************************************************************9 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.1   3.1e-08     5e-05       1      49 [.      67     117 ..      67     132 .. 0.87
   2 !   10.1   0.0   0.00051      0.84      26      70 ..     264     308 ..     246     340 .. 0.75

  Alignments for each domain:
  == domain 1  score: 23.7 bits;  conditional E-value: 3.1e-08
                 EEEESSTTSSHHHHHHHHHHHHT..HEEEEEETTTCSSSSTTHHHHHHHHH CS
         AAA   1 vllyGppGtGKTllakavakelg..vefleisgsellskyvgesekkirel 49 
                 vl+ G  GtGKT+l  a+a+elg  v+f+ + gse+ s+ ++++e+ ++++
  EPX72863.1  67 VLFAGGAGTGKTALGLAIAQELGpkVPFCPMVGSEVYSSEIKKTEALMENF 117
                 799*******************655************99899988887765 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00051
                 EEEEETTTCSSSSTTHHHHHHHHHHHH.HHHTSTSEEEEEETGGGH CS
         AAA  26 fleisgsellskyvgesekkirelfke.akekakpsilfiDEidal 70 
                 +++ + +e+++k+ +e +k ++ ++++ + e   p +lfiDE++ l
  EPX72863.1 264 LMKPKKTEITDKLRSEINKVVNRYIEQgIAELI-PGVLFIDEVHML 308
                 556667788888888899999999988545555.9*********87 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   1.9e-07    0.0003       9      61 ..      40      92 ..      37     104 .. 0.94
   2 !    9.0   0.0   0.00065       1.1      87     117 ..     299     329 ..     284     339 .. 0.88

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 1.9e-07
      RuvB_N  9 yigqekvkeklkifieaakkreealdhvllyGpPGlGkttlakiiakelgvkl 61
                +igq++ +e   ++i+  k+++     vl++G  G Gkt+l   ia+elg k+
  EPX72863.1 40 FIGQDNAREACGVIIDLIKSKKFGGRGVLFAGGAGTGKTALGLAIAQELGPKV 92
                9************************************************9765 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00065
      RuvB_N  87 vlfideihrlsraveevlysamedfrldivi 117
                 vlfide+h l+ +   +l +a+e     ivi
  EPX72863.1 299 VLFIDEVHMLDIECFTYLNQALESTISPIVI 329
                 9**********************98877777 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0     0.013        21       9      72 ..      68     133 ..      61     173 .. 0.67
   2 !   11.9   0.0   0.00012       0.2      54     127 ..     255     329 ..     208     337 .. 0.68

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.013
      AAA_22   9 vvtGesGtGKTtllrrlleqldeeakaeeerpevv.......fvtlpsst..sskdllrellralglelka....er 72 
                 +  G +GtGKT l   ++++l         +p+v        +v+ +  +  + + l++++ ra+gl+ k+    ++
  EPX72863.1  68 LFAGGAGTGKTALGLAIAQEL---------GPKVPfcpmvgsEVYSS--EikKTEALMENFRRAIGLRVKEtkevYE 133
                 556899************999.........44444223443333333..3447777788888888877777544444 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 0.00012
      AAA_22  54 kdllrellralglelkaerlsseellealeqalrarav.......ielliiDEaqhlrseealeeLrsllnlsrkgvqliL 127
                 +d+++++ + ++ ++ +    ++ l++ +++ ++++         +++l iDE++ l   e++++L + l+  ++  ++++
  EPX72863.1 255 QDIMSMMGQLMKPKKTE---ITDKLRSEINKVVNRYIEqgiaeliPGVLFIDEVHML-DIECFTYLNQALE--STISPIVI 329
                 55555555555533333...55555555555555555555556666***********.9999999977666..55555554 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   8.1e-05      0.13      23      52 ..      63     101 ..      40     330 .. 0.58

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 8.1e-05
      AAA_16  23 rpelvllsGesGvGKsslvrellralekd.........g 52 
                 +++ vl+ G +G+GK++l  +++++l  +         +
  EPX72863.1  63 GGRGVLFAGGAGTGKTALGLAIAQELGPKvpfcpmvgsE 101
                 3499*******************9999993333333322 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   3.7e-05     0.061       5      52 ..      68     122 ..      65     144 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 3.7e-05
     DUF2075   5 lVtGvaGtGKtvvllnllael.......eddeeertavylsvNhplvlvlreala 52 
                 l  G+aGtGKt ++l+++ el        +  +e ++  + + ++l++  r+a+ 
  EPX72863.1  68 LFAGGAGTGKTALGLAIAQELgpkvpfcPMVGSEVYSSEIKKTEALMENFRRAIG 122
                 567*****************98777777555566666666666666666666665 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.8    0.0076        12      11      27 ..      65      81 ..      57      91 .. 0.77
   2 ?    6.8   0.0     0.005       8.2      71     126 ..     240     320 ..     150     330 .. 0.64

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0076
      AAA_19 11 kvllvtaGpGtGKTrvl 27
                + +l  +G+GtGKT + 
  EPX72863.1 65 RGVLFAGGAGTGKTALG 81
                567889********875 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.005
      AAA_19  71 TiHrlal........................ldfddlltealelle................eaeeekklqeeellivDEfqdvdelqyrLlkall 126
                 T+H l +                                                       e+   + +    +l++DE+ ++d   ++ l++ l
  EPX72863.1 240 TLHDLDVanarpqggqdimsmmgqlmkpkktE-------------ItdklrseinkvvnryiEQGIAELI--PGVLFIDEVHMLDIECFTYLNQAL 320
                 66655445566655555555555444444421.............0222223333333343222222222..449**********66655555544 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1     6e-05     0.098       2      58 ..      67     124 ..      66     142 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 6e-05
      AAA_28   2 ivitGgestGKTtlleaLaar...gypvvpEaareileeklakgedalpwv.edllafaer 58 
                 + + Gg +tGKT l  a+a++   ++p  p ++ e+++++ +k+e  l +  ++  a+  r
  EPX72863.1  67 VLFAGGAGTGKTALGLAIAQElgpKVPFCPMVGSEVYSSEIKKTEA-LMENfRR--AIGLR 124
                 6799***************9997778889**********9999886.5554244..44433 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0     0.004       6.5      20      46 ..      62      88 ..      40     118 .. 0.75
   2 ?    4.6   0.0     0.011        19     107     133 ..     297     323 ..     288     336 .. 0.87

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.004
  Mg_chelatase 20 aGgHnlllvGppGsGKtmlakrlpsll 46
                   Gg  +l++G +G+GKt l  ++++ l
    EPX72863.1 62 FGGRGVLFAGGAGTGKTALGLAIAQEL 88
                  58999************9987776544 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.011
  Mg_chelatase 107 nGvLfLDElpefkrkvlevLRePledg 133
                    GvLf+DE+  ++ + +  L + le++
    EPX72863.1 297 PGVLFIDEVHMLDIECFTYLNQALEST 323
                   59**********************986 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0     0.016        26       2      33 ..      67     100 ..      66     125 .. 0.79
   2 ?    5.6   0.0    0.0088        14      65      91 ..     296     322 ..     262     328 .. 0.81

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.016
                 EEEE--SSSSHHHHHHHGGGGB..S--EEEEE-- CS
       AAA_5   2 vlLvGppGtgKselaerlaaal..nreveyvqlt 33 
                 vl  G  GtgK+ l   +a+ l  + ++  + ++
  EPX72863.1  67 VLFAGGAGTGKTALGLAIAQELgpKVPFCPMVGS 100
                 8999*************99999755555555544 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.0088
                 G-SEEEEESGGG--HHHHHHHHHHHHS CS
       AAA_5  65 egeilvlDEveraesevlnsLlsllee 91 
                  + +l++DEv++++ e +  L++ le 
  EPX72863.1 296 IPGVLFIDEVHMLDIECFTYLNQALES 322
                 5689********************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (456 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       559  (0.0311785); expected 358.6 (0.02)
Passed bias filter:                      518  (0.0288917); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 3423.84
//
Query:       EPX72864.1  [L=1166]
Description: ribosome biogenesis protein Rrp12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-66  223.7   0.9    3.5e-62  209.7   0.0    4.0  3  NUC173    NUC173 domain
     0.0097   16.1   0.5        1.5    9.0   0.0    3.6  3  RTP1_C1   Required for nuclear transport of RNA pol II C-term
  ------ inclusion threshold ------
      0.023   14.9   0.8       0.72   10.3   0.1    3.8  3  HEAT      HEAT repeat
      0.079   13.4   0.2        3.5    8.1   0.0    3.8  4  HEAT_2    HEAT repeats
        0.1   12.4   0.1       0.31   10.8   0.0    1.8  2  ArAE_2    Aromatic acid exporter family member 2
       0.63    9.5   4.9         29    4.1   0.0    4.3  5  Tti2      Tti2 family


Domain annotation for each model (and alignments):
>> NUC173  NUC173 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0     0.042   1.2e+02       2      72 ..     235     307 ..     234     317 .. 0.84
   2 !  209.7   0.0   1.2e-65   3.5e-62       2     204 .]     366     567 ..     365     567 .. 0.96
   3 !    7.6   0.0   0.00094       2.8       4      87 ..     869     953 ..     862     966 .. 0.80

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.042
      NUC173   2 llkaleslLslkyqaawkevlevlsalfeklgkrsspl.lkkilktlgelrese.efelkkeadevigaaira 72 
                 l+++++++ + + ++++  v+++++ l++k+ +  +   l+ +l tl++l+ se + +l     +++ +a+++
  EPX72864.1 235 LCNVCTQIVEQRSTQSIYLVFQIYEGLCKKFSDTTNFEgLRLALSTLQKLQPSEyDSQLLVPWLKAMNSAVAS 307
                 7899999999999******************999953359999*******99995557777777777777765 PP

  == domain 2  score: 209.7 bits;  conditional E-value: 1.2e-65
      NUC173   2 llkaleslL.slkyqaawkevlevlsalfeklgkrsspllkkilktlgelreseefelkkeadevigaairamGpevvLevlPLnleeeeeeklsegra 99 
                 l++ l + L s++y+ a +e+++++s+l+e++gk+s+p+l ++l+ ++ lr +e+f+ k  adevig+ ir++Gpe+vL+v+PLnle +  ++ + gra
  EPX72864.1 366 LCNHLCEALkSVHYRFAYPECFQIISRLCETIGKQSDPVLISALRLIDYLRGAETFDGKVLADEVIGTFIRVLGPEAVLNVIPLNLEMQ--TANAVGRA 462
                 67777777779****************************************************************************85..3469**** PP

      NUC173 100 WLLPlLrdnvrnaeLafFveellplaealeqkakeaeeakksveakiletlveqiWslLPsfcelptDlkesf.kklaklLsnaLyeqpeLrltickaL 197
                 WLLP+Lrdn+  ++L++F+++++pl+ +l+qk+ ++e + +sv ak ++tlv+qiW+lLP++c lp+Dl+ +f +++a +L n+Lyeq+ Lr+tic++L
  EPX72864.1 463 WLLPVLRDNIMFTNLSHFTNYFIPLSGTLYQKVLDME-DLDSVPAKLYQTLVDQIWALLPGYCYLPVDLQLAFtNDFAGVLVNVLYEQVSLRSTICNSL 560
                 ************************************9.8************************************************************ PP

      NUC173 198 rkLvesn 204
                 + Lve+n
  EPX72864.1 561 TLLVETN 567
                 ****987 PP

  == domain 3  score: 7.6 bits;  conditional E-value: 0.00094
      NUC173   4 kaleslLslkyqaawkevlevlsalfeklgkrs.spllkkilktlgelreseefelkkeadevigaairamGpevvLevlPLnle 87 
                 ++++ +++   ++ +k  + +++ + ++l + + +pll +++ +l ++ ++++ +++ ++++++ + +r  G  +v  ++P   +
  EPX72864.1 869 NTMNLFMKSANREIAKAAIDFTKIASSTLPSDFvKPLLPDLVPNLLSWSHESKGHFRAKVKHILEKMVRKFGVATVEPYVPVADK 953
                 4555555555566666666777777777777778999***************99**********************999998766 PP

>> RTP1_C1  Required for nuclear transport of RNA pol II C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.2     0.039   1.2e+02       4      64 ..      57     123 ..      54     131 .. 0.84
   2 !    9.0   0.0   0.00052       1.5       2     110 ..     325     439 ..     324     441 .. 0.85
   3 ?   -3.4   0.0       3.6   1.1e+04      64      86 ..     679     701 ..     676     723 .. 0.58

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.039
     RTP1_C1   4 alkdlqdpllpvrahglvlLrkliekkske.avldiekilkllleaLkdeds....Yv.YLnaikgL 64 
                  +k+++d    +r++  +lL+ ++++  ++  ++++++i+++l+  ++ e++    +v YLn+i+ L
  EPX72864.1  57 LIKEINDLNKGMRVQSFQLLEVIVKHVAPNvLQAKLPQIMSVLVPIVNREEPnkvfFVhYLNVIERL 123
                 5799999999*****************999556789********99998887666566678888766 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00052
     RTP1_C1   2 qealkdlqdpllpvrahglvlLrkliekkske..avldiekilkllleaLkd.edsYvYLnaikgLvaLadvfpeevlklLleey...eeenekeslde 94 
                 +++++ l+++ + vr ++ ++L+++++  + +  +++ ++++ + l eaLk     + Y ++ ++++ L++++ ++  + L+++          e+ d 
  EPX72864.1 325 SRVFTLLESDSVEVRLEAANTLSTIVSCLDDSpgSLSIASQLCNHLCEALKSvHYRFAYPECFQIISRLCETIGKQSDPVLISALrliDYLRGAETFDG 423
                 678899********************998877667888899999999999972568********************99999999877766777778888 PP

     RTP1_C1  95 rlkvGEaLlrvirrlg 110
                 ++ + E++  +ir lg
  EPX72864.1 424 KVLADEVIGTFIRVLG 439
                 8888888888888777 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 3.6
     RTP1_C1  64 LvaLadvfpeevlklLleeyeee 86 
                 Lv L ++ ++e ++ L ++++e 
  EPX72864.1 679 LVVLSSFLNQEYCPALFNYVQEF 701
                 66666666666666666665333 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.1   0.00024      0.72       5      30 ..     327     352 ..     324     353 .. 0.90
   2 ?   -3.2   0.0       5.2   1.6e+04       2      19 ..     695     712 ..     694     721 .. 0.65
   3 ?   -0.0   0.1       0.5   1.5e+03      14      29 ..     791     806 ..     785     808 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00024
                 HHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   5 llkllsDpspeVReaAakaLgalaev 30 
                 + +ll+++s eVR  Aa++L +++++
  EPX72864.1 327 VFTLLESDSVEVRLEAANTLSTIVSC 352
                 67899******************997 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 5.2
                 HHHHHHHHT-SSHHHHHH CS
        HEAT   2 lPlllkllsDpspeVRea 19 
                 ++ +++ l++ ++ + + 
  EPX72864.1 695 FNYVQEFLNHRDAAIQKK 712
                 567788888887777665 PP

  == domain 3  score: -0.0 bits;  conditional E-value: 0.5
                 HHHHHHHHHHHHHHHH CS
        HEAT  14 peVReaAakaLgalae 29 
                  + R+aA++ L ++a 
  EPX72864.1 791 ERARSAAFQLLMTIAA 806
                 566*********9985 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       0.6   1.8e+03      59      78 ..     156     175 ..     117     179 .. 0.72
   2 ?    8.1   0.0    0.0012       3.5      33      72 ..     324     375 ..     292     382 .. 0.69
   3 ?   -2.1   0.0       1.8   5.3e+03      24      43 ..     682     700 ..     679     720 .. 0.61
   4 ?   -3.4   0.1       4.4   1.3e+04      39      62 ..     785     808 ..     774     813 .. 0.59

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.6
      HEAT_2  59 gdpealpaLkellddddddv 78 
                  +++al++L++ l++++   
  EPX72864.1 156 PRSRALQVLAKVLKSPPPGP 175
                 45678888888888877655 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.0012
      HEAT_2  33 lpaLvellededpavRraaaeaLgai........g....dpealpaLkelld 72 
                 +  ++ lle+++ +vR +aa++L+ i        g     ++ +++L+e+l+
  EPX72864.1 324 FSRVFTLLESDSVEVRLEAANTLSTIvsclddspGslsiASQLCNHLCEALK 375
                 667899*****************98866665333322223556677777665 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 1.8
      HEAT_2  24 LgrignpealpaLvellede 43 
                 L ++ n+e+ paL+++++ e
  EPX72864.1 682 LSSFLNQEYCPALFNYVQ-E 700
                 667778888788777764.2 PP

  == domain 4  score: -3.4 bits;  conditional E-value: 4.4
      HEAT_2  39 llededpavRraaaeaLgaigdpe 62 
                 + +  +++ R aa + L  i+ ++
  EPX72864.1 785 ATKEVNERARSAAFQLLMTIAASA 808
                 444556677777777666665554 PP

>> ArAE_2  Aromatic acid exporter family member 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00011      0.31      75     100 ..     221     246 ..     195     272 .. 0.78
   2 ?   -3.7   0.0       2.8   8.5e+03     100     123 ..     675     698 ..     669     705 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00011
      ArAE_2  75 lslkGrwpskkyarlqalvselvqll 100
                 + l+ +wps+++ rl+++++++v++ 
  EPX72864.1 221 ICLSAPWPSAQLTRLCNVCTQIVEQR 246
                 6689*******************874 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 2.8
      ArAE_2 100 larLlvvlkrlepeewlkrllrrv 123
                 l+ Llvvl+++  +e++++l++ v
  EPX72864.1 675 LMDLLVVLSSFLNQEYCPALFNYV 698
                 556666666665899**9999866 PP

>> Tti2  Tti2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0    0.0098        29      97     137 ..      68     108 ..      37     111 .. 0.89
   2 ?    3.7   0.0     0.013        38     128     159 ..     327     360 ..     273     379 .. 0.87
   3 ?   -3.1   0.0       1.5   4.4e+03     124     157 ..     603     636 ..     602     643 .. 0.87
   4 ?   -0.7   0.0      0.28   8.3e+02     132     170 ..     702     739 ..     673     771 .. 0.74
   5 ?   -2.7   0.0       1.1   3.3e+03     196     249 ..     797     857 ..     795     915 .. 0.64

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.0098
        Tti2  97 gdlkaisvlawiirqlqskeieanwplivPpiLnllDdtdt 137
                  ++++ ++l++i++++ ++ ++a++p i+++++ +++ +++
  EPX72864.1  68 MRVQSFQLLEVIVKHVAPNVLQAKLPQIMSVLVPIVNREEP 108
                 578999*************889**********999988775 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.013
        Tti2 128 iLnllDdtdtsvKlrGlklLqtlleklessk..l 159
                 + +ll++++++v+l + + L+t++++l++s+  l
  EPX72864.1 327 VFTLLESDSVEVRLEAANTLSTIVSCLDDSPgsL 360
                 779************************9997742 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 1.5
        Tti2 124 ivPpiLnllDdtdtsvKlrGlklLqtllekless 157
                 + +++Ln+  +t  ++++  lk++qt+l+  + +
  EPX72864.1 603 FLSVLLNVFSSTASQFRYPILKCIQTWLSISPPD 636
                 67899**********************9987765 PP

  == domain 4  score: -0.7 bits;  conditional E-value: 0.28
        Tti2 132 lDdtdtsvKlrGlklLqtlleklesskllkrtGLdsvfe 170
                 l+ +d ++  +G klL+ +l   +      + ++ +vfe
  EPX72864.1 702 LNHRDAAIQKKGYKLLSAMLRTEFGR-GYANLNMVKVFE 739
                 55566777777777777777776666.566666666665 PP

  == domain 5  score: -2.7 bits;  conditional E-value: 1.1
        Tti2 196 aYpallsLaklefaekske........rrklldkilregilsglsh..asesprlvellleqls 249
                 a++ l+++a    ++   +        r +++ ++++ g+  + +h  ++  + +++++le+ +
  EPX72864.1 797 AFQLLMTIAASAVQS---NlfgdsipiRVEKFLSVISAGLAGSSTHmiSAAIIAISSVVLEYKE 857
                 555555555444433...1334666667777777777777777777643333666666665533 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1166 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1018  (0.0567795); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.81u 0.31s 00:00:01.12 Elapsed: 00:00:00.49
# Mc/sec: 7139.45
//
Query:       EPX72865.1  [L=388]
Description: 60S ribosomal protein L3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   1.9e-191  635.9   7.1   2.2e-191  635.7   7.1    1.0  1  Ribosomal_L3  Ribosomal protein L3
  ------ inclusion threshold ------
       0.53   10.1   2.2       0.86    9.5   0.5    2.2  2  Tho1_MOS11_C  Tho1/MOS11 C-terminal domain


Domain annotation for each model (and alignments):
>> Ribosomal_L3  Ribosomal protein L3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  635.7   7.1  2.4e-195  2.2e-191       1     369 []       1     366 [.       1     366 [. 1.00

  Alignments for each domain:
  == domain 1  score: 635.7 bits;  conditional E-value: 2.4e-195
                   XX.S.SXXXXSSXCCCTTXSBXSXSSXXXSX.XXSBTTTTTXBSEEEEEEEEEEEEEEECHHTTSCCCCCEEEEEEEEEEC--EEEEEEEEEEEETT CS
  Ribosomal_L3   1 mshrkfeaprhgslGflprkRaerergkvksfPkddtskpvkltaflGyKaGmthiVrevdkpgskldkkevveavtvvetppmvivgvvgyvetpr 97 
                   msh+k+e+pr+gslGflprkRa+r rgkvk+fPkdd+skpv+ltaflGyKaGmthiVr++d+pgsk++k+e++eavtv+etppmv+vgvvgyvetpr
    EPX72865.1   1 MSHCKYEHPRLGSLGFLPRKRASRVRGKVKAFPKDDSSKPVHLTAFLGYKAGMTHIVRDLDRPGSKMHKREILEAVTVIETPPMVVVGVVGYVETPR 97 
                   9************************************************************************************************ PP

                   EEEEEEEEESSS.SHHHHCCCSTSTTTSSSSSSHCCCCHCSSCCCCCCHHHHHHHHHHSCSCEEEEEEEECCCSS-SCCSSHHEEEEECHCSCHHHH CS
  Ribosomal_L3  98 GlrslktvwaehlseevkrrlyknwykskkkaftkyskkyeskdvkklieadleeikkeasvvrviahtvirktkslaqKkahllEiqvngGtiaek 194
                   Glrsl+tvwaehlseevkrr+yknw+kskkkaftky+kky   ++++++ ++le+ikk++svvrv+aht+irkt+ laqKkahl+Eiq+ngG++a+k
    EPX72865.1  98 GLRSLTTVWAEHLSEEVKRRFYKNWFKSKKKAFTKYAKKY--SENTQSLSRELERIKKYCSVVRVLAHTQIRKTP-LAQKKAHLMEIQINGGSVADK 191
                   ****************************************..9999*****************************.********************* PP

                   HHHHHHCCTCEEECCCCS-TTSEEEEEEEE---EEE-HHHHCT----STTTSSSSSS-S-SS-SSSSS--TTS--SEEESCCEEEEEEEEEEEEETT CS
  Ribosomal_L3 195 ldfarealektvavaavFrqgeliDvigvtkGkGfeGvvkRWgvkklprkthrglRkvaaigawdparVsstvaraGqkGyhhRtelnkkiyrigkg 291
                   +++are++ektv+v+++F+q+e++Dvi+vt+GkG eG++ RWg+k+lprkthrglRkva+igaw+pa+V++tv+raG++Gy+hRt+ln+kiyr+g+g
    EPX72865.1 192 VEWAREHFEKTVDVKSTFEQNEMVDVIAVTRGKGAEGTTGRWGTKHLPRKTHRGLRKVACIGAWHPANVQWTVPRAGNAGYMHRTQLNSKIYRVGSG 288
                   ************************************************************************************************* PP

                   TSSTTTSSTTT.SS..SS.TTTCTTCB..TSCEEEEES--SSSTTEEEEEEE-SSGGGSCCCSS-EEEEEE-TTCTSS CS
  Ribosomal_L3 292 edaknastefdltekeitPmGGfvhyGevkndfilvkGsvpGpkkrlvklrkslltqtsrkaeeevslkfidtaskfg 369
                   ed+knast+fd+tek+itPmGGfv+yG v+nd+i+++G++pGp kr++++rksl+t+tsrka+e v+lk+idtaskfg
    EPX72865.1 289 EDSKNASTDFDATEKRITPMGGFVRYGAVDNDYIMLNGATPGPVKRIMTIRKSLITHTSRKALEAVNLKWIDTASKFG 366
                   ****************************************************************************98 PP

>> Tho1_MOS11_C  Tho1/MOS11 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.5   9.6e-05      0.86      19      42 ..     134     154 ..     124     155 .. 0.85
   2 ?   -1.9   0.0      0.34   3.1e+03       9      26 ..     351     369 ..     348     378 .. 0.64

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 9.6e-05
  Tho1_MOS11_C  19 akKFgqeeeaidelekqleRieKF 42 
                   akK++++    ++l ++leRi+K+
    EPX72865.1 134 AKKYSENT---QSLSRELERIKKY 154
                   78887666...89**********8 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.34
  Tho1_MOS11_C   9 ielLekk.lkRakKFgqee 26 
                   +e  + k +  a KFg + 
    EPX72865.1 351 LEAVNLKwIDTASKFGHGR 369
                   5555544466788998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (388 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1083  (0.0604049); expected 358.6 (0.02)
Passed bias filter:                      680  (0.0379274); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.30s 00:00:00.86 Elapsed: 00:00:00.46
# Mc/sec: 2549.88
//
Query:       EPX72866.1  [L=45]
Description: hypothetical protein SOCG_00628 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.9e-18   64.5  13.5    1.2e-17   63.8  13.5    1.4  1  M-factor  M-factor


Domain annotation for each model (and alignments):
>> M-factor  M-factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.8  13.5   6.7e-22   1.2e-17       1      43 []       1      45 []       1      45 [] 0.90

  Alignments for each domain:
  == domain 1  score: 63.8 bits;  conditional E-value: 6.7e-22
    M-factor  1 MDsm...AnnssSSSlvNaannkPtetvtkgvknYtPKvPyMCvIA 43
                MD+m     +s SSSlvN+a++kPt+t  +++ +Y+PK+P+MCvIA
  EPX72866.1  1 MDAMnntISSSTSSSLVNNAPSKPTVT-SSNASWYQPKPPAMCVIA 45
                99**5444467789*************.*****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (45 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       377  (0.0210274); expected 358.6 (0.02)
Passed bias filter:                      191  (0.0106531); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.25s 00:00:00.60 Elapsed: 00:00:00.40
# Mc/sec: 335.07
//
Query:       EPX72867.1  [L=426]
Description: pyruvate dehydrogenase kinase Pkp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      1e-48  165.3   0.0    1.4e-48  164.8   0.0    1.2  1  BCDHK_Adom3  Mitochondrial branched-chain alpha-ketoacid dehy
    1.3e-09   38.5   0.0    2.2e-09   37.8   0.0    1.4  1  HATPase_c    Histidine kinase-, DNA gyrase B-, and HSP90-like
    0.00043   20.1   0.0     0.0012   18.7   0.0    1.6  2  HATPase_c_3  Histidine kinase-, DNA gyrase B-, and HSP90-like


Domain annotation for each model (and alignments):
>> BCDHK_Adom3  Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.8   0.0   2.3e-52   1.4e-48       1     161 [.      22     240 ..      22     241 .. 0.96

  Alignments for each domain:
  == domain 1  score: 164.8 bits;  conditional E-value: 2.3e-52
  BCDHK_Adom3   1 pvslrqlvqfgekpstgtllksaqflreelpirlAhrvkelenlPdglvenpsvkkvkdwYaqsfeellelpkpelee.................... 78 
                  ++sl+qlv fg+  ++g l++s  flr+elpirlAhr+++l+nlP  l  ++ ++ v+  Ya+s+ee+++l+  el +                    
   EPX72867.1  22 GLSLKQLVYFGQDRNPGRLFRSGLFLRDELPIRLAHRIQDLQNLPPLLGGMKRISAVRAAYARSMEEIIDLKGIELPKclpkhkrypkapkwrasffh 119
                  59***********99999*****************************************************9977777888899999*********** PP

  BCDHK_Adom3  79 ............................................nekftelLekikkrHddvvttlaqGvlelkekrkrkqidseiqsFLdrfymsRI 132
                                                              n +f +lL++i++rHd+v + la  ++e+++k  +kqid++iq FLdrfymsRI
   EPX72867.1 120 nfvqhnpslldthldssrgryfnidfskpctgeeyewpeslhkfNISFSRLLDTIRTRHDNVASELALDIQEYRRK--TKQIDHSIQVFLDRFYMSRI 215
                  **************************************************************************99..78****************** PP

  BCDHK_Adom3 133 giRmLieqhiaLteqskskkepsdyvGiI 161
                  giRmLi+q+iaL ++     ++++ vGiI
   EPX72867.1 216 GIRMLIGQYIALVTEP----PRENRVGII 240
                  *************985....46788**99 PP

>> HATPase_c  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.8   0.0   3.7e-13   2.2e-09       3     108 ..     287     415 ..     285     418 .. 0.76

  Alignments for each domain:
  == domain 1  score: 37.8 bits;  conditional E-value: 3.7e-13
                 HHHHHHHHHHHHHHHHHH........HSTTTEEEEEEEEEETEEEEEEEESSSSSTTHHHTGTCS.TTCH..............HCSTCHTSTSSSHHH CS
   HATPase_c   3 ekrLrqiisnlvdNavkf........atkageieveikaseddlvisveDnGiGipkedlkklfe.kfsq..............ddstkrggggtGlGl 78 
                 e++L ++i ++++N++++        a + + ++v + + e+d++i+++D G G +++d   +    +++              ++s+     g+G+Gl
  EPX72867.1 287 ESHLNHAIFEILKNSLRAtveyygvdADSYPPVKVLVVKGEEDITIRISDRGGGFTRKDSSVVWSyMYTTahetlsddyndtmtAASSLPPMAGFGFGL 385
                 6899*************9666655432233344555553458*******************5555444445555654555455556666669******* PP

                 HHHHHHHHHTTTEEEEEEETTTEEEEEEEE CS
   HATPase_c  79 sivkklvelmgGeiwvesepgrGttftftl 108
                  +++ +++ +gG++++ s +g Gt+ +++l
  EPX72867.1 386 PLARLYTRYFGGDLKLVSMEGYGTDAYIQL 415
                 *************************99877 PP

>> HATPase_c_3  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       0.7   4.2e+03      89     112 ..     173     196 ..     166     205 .. 0.73
   2 !   18.7   0.0   1.9e-07    0.0012       4      80 ..     291     388 ..     288     414 .. 0.75

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 0.7
  HATPase_c_3  89 tvitkkegesstltldvdkidken 112
                  t+ t++++  s+l ld++   ++ 
   EPX72867.1 173 TIRTRHDNVASELALDIQEYRRKT 196
                  678888888888888888766543 PP

  == domain 2  score: 18.7 bits;  conditional E-value: 1.9e-07
  HATPase_c_3   4 ekAlaelvdNsldAdaen..........vkievnknrgktgeivieDdGkGmseeelkn.alrlatsskeakr...ksts..........lGkkGiGl 77 
                  + A++e+++Nsl A  e+          vk+ v k + ++ +i+i D G G ++++    +  + t+++e+ +   +  +          +  +G+Gl
   EPX72867.1 291 NHAIFEILKNSLRATVEYygvdadsyppVKVLVVKGE-EDITIRISDRGGGFTRKDSSVvWSYMYTTAHETLSddyN--DtmtaasslppMAGFGFGL 385
                  89*********************************97.799************998776444444444443332121..1234444555566666666 PP

  HATPase_c_3  78 klA 80 
                   lA
   EPX72867.1 386 PLA 388
                  555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (426 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       521  (0.0290591); expected 358.6 (0.02)
Passed bias filter:                      509  (0.0283898); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 3230.37
//
Query:       EPX72868.1  [L=112]
Description: mediator complex subunit Med11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-09   38.3   0.2    2.2e-09   37.9   0.2    1.2  1  Med11     Mediator complex protein


Domain annotation for each model (and alignments):
>> Med11  Mediator complex protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.9   0.2   1.2e-13   2.2e-09       3      78 ..      20      84 ..      18      97 .. 0.92

  Alignments for each domain:
  == domain 1  score: 37.9 bits;  conditional E-value: 1.2e-13
       Med11  3 riqqLneIDkdIvslLesasealkaLskppeqepaseseeaqkeafkaatstffstLssvdvrLrrqIyaLeeagi 78
                +i+q+ eI+ +I  +L+ as+ +++  +           +++ e+f++++++ff+tL+ v++ Lr+q++ Le a +
  EPX72868.1 20 KIEQILEIESKIPDILSYASNCIDSIET-----------KESIEEFNNNARSFFQTLEYVSTGLRKQVLDLEKAEV 84
                79************************66...........899******************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       692  (0.0385967); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 817.05
//
Query:       EPX72869.1  [L=235]
Description: alanine racemase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.4e-27   96.8   0.0    1.7e-27   96.5   0.0    1.0  1  Ala_racemase_N  Alanine racemase, N-terminal domain


Domain annotation for each model (and alignments):
>> Ala_racemase_N  Alanine racemase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.5   0.0   9.4e-32   1.7e-27      12     219 .]      14     224 ..       7     224 .. 0.85

  Alignments for each domain:
  == domain 1  score: 96.5 bits;  conditional E-value: 9.4e-32
                     HHHHHS.CTTSEEEEE-HHHHHTTHHHHHHHHHHHTTESEEEESSHHHHHHHHHTTS.CSEEEEESC...STGGGHHHHHHTTEEEEESSHHHHH CS
  Ala_racemase_N  12 rlrala.gpgaklmavvKanayghgavevaralaeggadgfgvatleEalelreagi.tapilvleg...fspeelaalaeydltvtvdsleqle 101
                     ++++ a g++ +l+av+K     h ++++++a + +g ++fg+++++E l  +e    + ++  ++     + +++a++ +     t+d++++++
      EPX72869.1  14 QVQQCAnGRNINLVAVSKF----HPVEQLMEAYE-AGQRHFGENYMQEFLVKAELMPkDIQWHFIGNmqsQKCKKIASVKNLYAIETIDNEKKAR 103
                     566777444788*******....********555.78*************555554434455555552224556666666679************ PP

                     HHHHHHHHTTS-EEEEEEBESSSS..SSSBSCHHHHHHHHHHHHTTTEEEEEEE-S-SSTTSTSHHHHHHHHHHHHHHHHHHHTTGGGSEEEEES CS
  Ala_racemase_N 102 alaaaareagkplrvhlkidtgmg..RlGftpeeleellealaalpglrleglmtHfasadepdeeteaqlarfeealeelekaglrppvvslan 194
                      +++a+++ ++plrv ++i+t+++  + G+ p+e+ +l++ +++l+ lrl+glmt+ + + ++ +  + +++ + +++ +l+++  +p  +s+++
      EPX72869.1 104 LVNQAREAIQTPLRVYVQINTSGEpnKAGVMPSEALDLCKVVQSLEYLRLQGLMTIGSISHSQLQDQNPDFQLLSDLRLKLQAELNSPLELSMGM 198
                     **********************999***********************************985567777************98889999****** PP

                     HHHHHHSG.GGTTEEEESGGGGT-SS CS
  Ala_racemase_N 195 Saaillaa.ahfdmvRpGialyGlsp 219
                     S+++ la+ + +d vR+G++++G +p
      EPX72869.1 199 SSDFPLAIkYGSDSVRVGSSIFGSRP 224
                     *******7466************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (235 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       586  (0.0326845); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1756.66
//
Query:       EPX72870.1  [L=216]
Description: methionine salvage haloacid dehalogenase-like hydrolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0036   17.4   0.0     0.0047   17.0   0.0    1.2  1  HAD_2     Haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> HAD_2  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   2.6e-07    0.0047      19     177 ..      26     189 ..       6     190 .. 0.77

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 2.6e-07
       HAD_2  19 afnelleeyglselseeelrkliglslrellrklgeseeeee........kieellrkyneekkkkevkpydgvkelLeeLkeagyklgivTsksreav 109
                  +++ ++ey  ++++e++  + +g s + +l+ + +    e+           +++++ +++++    +++++v+ ++e   + g k+ i +s+s  a+
  EPX72870.1  26 YAEKHYKEYVEQHYEEDQNLHALGDSPESTLSAIRKLHA-EGskdrhfkhVQGSIWKDGYKRNEL-VSHLFPDVIPFIERALQIGSKVYIYSSGSVPAQ 122
                 455566666555888888888888888877766665333.3335566554333444443333333.5789**********99***************** PP

       HAD_2 110 eekleqlgiesyFdvivtsedvekk.KPdpeviekaleklklkkeeviyvGDsptDieaakkagikvia 177
                 +  +++++  +++ +  +  d++   K + ++++k++     ++ e ++  D+++ ++aa+++gi+v  
  EPX72870.1 123 KLYFSHTESGDILPFLSGFFDTTTGiKTESDSYKKIIGD--SDAREWLFLSDNINELKAAQRIGIHVGL 189
                 ****************9976655544**********986..6889********************9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       416  (0.0232026); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1722.39
//
Query:       EPX72871.1  [L=454]
Description: Rieske ISP assembly ATPase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.2e-45  155.0   0.1    2.8e-45  154.6   0.1    1.1  1  BCS1_N        BCS1 N terminal
    3.5e-19   69.5   0.0    6.2e-19   68.7   0.0    1.4  1  AAA           ATPase family associated with various cellular 
  ------ inclusion threshold ------
      0.015   15.7   0.0      0.048   14.0   0.0    1.7  1  AAA_16        AAA ATPase domain
      0.017   14.8   0.0       0.04   13.6   0.0    1.6  2  AAA_24        AAA domain
      0.021   14.6   0.0      0.045   13.5   0.0    1.6  1  AAA_21        AAA domain, putative AbiEii toxin, Type IV TA s
      0.037   13.6   0.0       0.13   11.8   0.0    1.8  2  AAA_25        AAA domain
      0.053   13.3   0.0      0.097   12.4   0.0    1.3  1  RuvB_N        Holliday junction DNA helicase RuvB P-loop doma
      0.069   12.9   0.0       0.16   11.7   0.0    1.5  1  AAA_29        P-loop containing region of AAA domain
       0.08   13.3   0.0       0.24   11.8   0.0    1.8  2  RNA_helicase  RNA helicase
      0.098   12.0   0.0       0.19   11.1   0.0    1.4  1  ATPase        KaiC
       0.11   12.6   0.0       0.22   11.7   0.0    1.5  1  AAA_33        AAA domain
       0.13   11.8   0.0       0.24   10.9   0.0    1.4  1  AAA_7         P-loop containing dynein motor region
       0.13   11.3   0.0       0.31   10.1   0.0    1.5  1  T2SSE         Type II/IV secretion system protein
       0.16   12.5   0.0       0.31   11.6   0.0    1.4  1  ABC_tran      ABC transporter
       0.17   12.4   0.0        0.3   11.6   0.0    1.4  1  AAA_18        AAA domain


Domain annotation for each model (and alignments):
>> BCS1_N  BCS1 N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  154.6   0.1   2.3e-48   2.8e-45       1     187 []      37     214 ..      37     214 .. 0.90

  Alignments for each domain:
  == domain 1  score: 154.6 bits;  conditional E-value: 2.3e-48
      BCS1_N   1 lgallaaarrllselaslirrrflvsveissdDeaydwvlaWlsaqpasrrsrelsvetrtksrssdssaeedededeeedgkkkkplrylPavgtthl 99 
                 +ga la++rr++ ++a li+rr+lvsvei+s++++y+ +l+W++  p  r s++l+ve+r + +s    + +++ +++++  + ++ ++++P++g +h+
  EPX72871.1  37 FGAGLAILRRGVVSGAGLIKRRMLVSVEIPSKEKSYNAFLHWMGTVP-KRYSNQLAVEARGSAKS--IFHPPTR-SSNQP--SPSSLFQLVPGPG-KHF 128
                 6899***************************************9987.66889999999966653..3333332.22332..3578*********.6** PP

      BCS1_N 100 frykgrllavtRereekssdsetgapeetltltclgrsreilkeLleearelalkkqegktviyraaagsggeWrrvas.RpkRplstV 187
                 ++yk+ +++v+R+r+++ +d++tg+p+et+tlt+l+r+r i++++l ea++  + +q++kt+iy+a+    ++W++++s R kR ls+V
  EPX72871.1 129 IKYKKCWIQVERQRSSRLQDLTTGTPWETITLTTLSRDRGIFSDMLLEAQKFMHTAQKNKTTIYTAW---ATDWKPFGSpRSKRLLSSV 214
                 *****************************************************************99...9*****************9 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.7   0.0   5.2e-22   6.2e-19       2     131 ..     250     373 ..     249     374 .. 0.92

  Alignments for each domain:
  == domain 1  score: 68.7 bits;  conditional E-value: 5.2e-22
                 EEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHH..TTCCCHHHHHHHHHHHHHHHHTTT CS
         AAA   2 llyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr..sgseseeeervvnqLlteldgvkk 98 
                 llyGppG GKT++  a+a el+ +++ ++++e        s +++++l++++  k   si++++++d+ ++ r  sg+    ++ + + Ll+++dgv++
  EPX72871.1 250 LLYGPPGSGKTSFLYALAGELDYDICVLNLAERG-----LSDDRLNHLLSNVPPK---SIVLLEDVDSAFQGRdrSGEIGFRANVTFSGLLNAVDGVTS 340
                 9****************************99977.....99********998655...7**************8777788889999************* PP

                 SSSTEEEEEEESSGGGSTHHHHS.TTSSEEEETT CS
         AAA  99 keskvivigatnrpdkldpallr.gRfdrkieie 131
                  ++  i+ ++tn+p+ ldpal+r gR+d+k +++
  EPX72871.1 341 ADE-RIIFMTTNHPEILDPALIRpGRVDIKAYLG 373
                 866.89999********************99875 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0     4e-05     0.048      23      51 ..     243     273 ..     225     288 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 4e-05
      AAA_16  23 rp..elvllsGesGvGKsslvrellralekd 51 
                  p  +  ll+G++G+GK+s + +l+ +l  d
  EPX72871.1 243 IPyrRGYLLYGPPGSGKTSFLYALAGELDYD 273
                 4466889************998888777665 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       5.9   7.1e+03     107     129 ..     173     195 ..     165     227 .. 0.56
   2 ?   13.6   0.0   3.3e-05      0.04       5      29 ..     249     277 ..     246     309 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 5.9
      AAA_24 107 laeefrrllkklqelrknvifia 129
                 +  e ++++ + q+ + +++   
  EPX72871.1 173 MLLEAQKFMHTAQKNKTTIYTAW 195
                 44444444444444444444433 PP

  == domain 2  score: 13.6 bits;  conditional E-value: 3.3e-05
      AAA_24   5 iliyGpsgiGKTtlakel....gpkplfi 29 
                 +l+yGp+g+GKT++++ l     +++ ++
  EPX72871.1 249 YLLYGPPGSGKTSFLYALagelDYDICVL 277
                 689************99866555555555 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   3.8e-05     0.045       3      75 ..     250     325 ..     249     345 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 3.8e-05
      AAA_21   3 vliGpNgsGKSnLLdaldllarl....drdvegltdelsggggirkipslldlydpeipfefeieeflsqgvryryg 75 
                 +l+Gp gsGK+++L+al +  ++    ++ +e++ ++++ +  ++ +p ++    ++ +++f+ +   s ++ +r +
  EPX72871.1 250 LLYGPPGSGKTSFLYALAGELDYdicvLNLAERGLSDDRLNHLLSNVPPKSIVLLEDVDSAFQGR-DRSGEIGFRAN 325
                 79***************877666888877777777777777777777777777777777776666.66666655555 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00011      0.13      23      54 ..     236     267 ..     219     270 .. 0.83
   2 ?   -1.8   0.0       1.6     2e+03      98     129 ..     327     359 ..     303     392 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00011
      AAA_25  23 rwlvkgllpagelallaGapgtGKttlaldla 54 
                 +w+ ++ +p     ll+G+pg+GKt +++ la
  EPX72871.1 236 QWYADRGIPYRRGYLLYGPPGSGKTSFLYALA 267
                 677777778888889**************998 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 1.6
      AAA_25  98 rddarllvldlagv.eslpLfakdrggtlltad 129
                 ++ + l ++d++++ +++ +f+++++ ++l+++
  EPX72871.1 327 TFSGLLNAVDGVTSaDERIIFMTTNHPEILDPA 359
                 666667788888888888888888888887665 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   8.1e-05     0.097      37      91 ..     250     305 ..     245     311 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 8.1e-05
      RuvB_N  37 llyGpPGlGkttlakiiakelgvklkitsgPvle.kagdlaalltnleekdvlfid 91 
                 llyGpPG Gkt++   +a el+ ++ +            l  ll+n+ +k +++++
  EPX72871.1 250 LLYGPPGSGKTSFLYALAGELDYDICVLNLAERGlSDDRLNHLLSNVPPKSIVLLE 305
                 9********************99987654333220233366666666666666655 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00013      0.16      12      42 ..     238     266 ..     232     269 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00013
      AAA_29  12 fdghtieidlkgatlltGpsGsGKSTllDAi 42 
                 + ++ i+ + +g +ll Gp GsGK+++l A+
  EPX72871.1 238 YADRGIPYR-RG-YLLYGPPGSGKTSFLYAL 266
                 555666776.77.9************99776 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0    0.0002      0.24       2      26 ..     250     274 ..     249     320 .. 0.86
   2 ?   -2.9   0.0       7.3   8.7e+03      94     107 .]     339     352 ..     332     352 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.0002
  RNA_helicase   2 wlyGpsgeGKStlakeLakallkkl 26 
                   +lyGp+g GK+++ + La +l  ++
    EPX72871.1 250 LLYGPPGSGKTSFLYALAGELDYDI 274
                   69***************99887655 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 7.3
  RNA_helicase  94 tlftSkvvivtsNv 107
                   t+ + +++++t+N+
    EPX72871.1 339 TSADERIIFMTTNH 352
                   56677899****96 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00016      0.19      13      35 ..     240     262 ..     223     277 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00016
      ATPase  13 kgGipegrvvlitGepGtGKtif 35 
                 ++Gip +r +l++G pG+GKt f
  EPX72871.1 240 DRGIPYRRGYLLYGPPGSGKTSF 262
                 58*******************77 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00019      0.22       3      28 ..     250     277 ..     249     309 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00019
      AAA_33   3 llvGlpGsGKstlaerllkklg..avll 28 
                 ll G+pGsGK+ ++  l+ +l+   ++l
  EPX72871.1 250 LLYGPPGSGKTSFLYALAGELDydICVL 277
                 578****************999665554 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0    0.0002      0.24      22      68 ..     235     278 ..     232     296 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.0002
       AAA_7  22 ysyllelllknkkpvllvGptGtGKtviikdllkkldkekylsltin 68 
                 y++  +  +  ++  ll+Gp G+GKt+ +  l  +ld   y + ++n
  EPX72871.1 235 YQWYADRGIPYRRGYLLYGPPGSGKTSFLYALAGELD---YDICVLN 278
                 788889999999******************9999999...4444444 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00026      0.31     131     156 ..     248     273 ..     227     281 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00026
       T2SSE 131 lilvsGgTgsGKttllyallkeinks 156
                   l+ G+ gsGKt +lyal  e++ +
  EPX72871.1 248 GYLLYGPPGSGKTSFLYALAGELDYD 273
                 56889**************9999865 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00026      0.31      14      38 ..     249     273 ..     241     314 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00026
                 EEEEESTTSSHHHHHHHHTTSS--S CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  14 vaivGenGaGKStLlkllagllkpt 38 
                 + + G+ G+GK+++l +lag+l+ +
  EPX72871.1 249 YLLYGPPGSGKTSFLYALAGELDYD 273
                 6799****************99865 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00026       0.3       2      44 ..     250     291 ..     250     340 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00026
      AAA_18   2 lltGtpGvGKttlakeLskrlgfgvnlrdvakenglllevdpe 44 
                 ll G+pG+GKt++  +L+ +l + +++  +++e+gl++++ ++
  EPX72871.1 250 LLYGPPGSGKTSFLYALAGELDY-DICVLNLAERGLSDDRLNH 291
                 589**************877644.3444444444555544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (454 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       458  (0.0255452); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        84  (0.00468515); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 3417.92
//
Query:       EPX72872.1  [L=443]
Description: malic acid transporter Mae1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.3e-69  233.2  52.9      5e-69  233.0  52.9    1.0  1  SLAC1            Voltage-dependent anion channel


Domain annotation for each model (and alignments):
>> SLAC1  Voltage-dependent anion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  233.0  52.9   2.8e-73     5e-69       1     323 [.      33     372 ..      33     373 .. 0.90

  Alignments for each domain:
  == domain 1  score: 233.0 bits;  conditional E-value: 2.8e-73
       SLAC1   1 hftpawFaivMGtgilalllkalp.a.rglriislilfllalvlfllllvlyllrfilypeavrkelrhpveslflgtfpmglltilnglll..vl.pg 94 
                 hft++wFai+MGtg+++l++ +lp + +gl++i++i+++l+lvl++l+++l++ rf++y++++ +++rh +e +f++t+++++  ++ +l+    + +g
  EPX72872.1  33 HFTWSWFAITMGTGGIGLIIGTLPfRfYGLNTIGKIVYILDLVLLTLFCCLMITRFLVYRDTFMASWRHFQEKFFISTCLLSFSNCIDMLAVyaKPsTG 131
                 8*******************5599845********************************************************9999777773455555 PP

       SLAC1  95 ewlatlalvllWigvllslltavvvvfllftekeekleeitpawllpvvgllvvallgallaes.qnpslqllgilvvslllwglGlllalvlfvlyly 192
                 ew+++++++l++i++++++l+ ++ ++ +f+ +  +le++ paw+lp++++++ ++++++++++ ++p+    ++++++++++glG+ ++l++f+ +l 
  EPX72872.1 132 EWMVWVIRILYYIYIAVTFLYGLFAYYTVFRDHVYTLETAAPAWVLPIFPCMIGGVVAGAVLATqPSPQ-LK-NMVIFGIMFQGLGFWVYLMIFSAMLL 228
                 *********777*******************99778**********************99988845555.33.58************************ PP

       SLAC1 193 rlithklppaelrptlfiplGplgqgalallllgkaa.pk.........aaevlkvlalllalflwglglfwllvavlsvls...lpv.rlkfslswWa 277
                 r++t ++p+a  rp +fi+ Gp+g+++lal+++++ a  +           + l +++ +la+f+wglg+++++++++ ++      + ++kfs +w+a
  EPX72872.1 229 RFFTIGFPAATERPAMFILTGPPGFTGLALINMARGAiATrpnifiganSSDDLVFISTFLAIFVWGLGAWVWCLCLVTLVAgifS-HaPMKFSNTWFA 326
                 ************************************95556777665433333356*******************99999997651.1589******** PP

       SLAC1 278 ftFPlgalalatielgkaleseafkvlgtillvllvlvwllvlvgt 323
                 ++F ++++++ t+++g++ +s+af  +g i++v+l++vw+++++++
  EPX72872.1 327 LIFSNVGFVILTFRIGEEIDSKAFTLFGHIIAVALCIVWIILMYMM 372
                 *******************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (443 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       863  (0.0481343); expected 358.6 (0.02)
Passed bias filter:                      290  (0.0161749); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.30s 00:00:00.92 Elapsed: 00:00:00.47
# Mc/sec: 2839.98
//
Query:       EPX72873.1  [L=185]
Description: niemann-Pick disease type C2 protein hE1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.5e-21   77.2   0.1    1.8e-21   76.9   0.1    1.1  1  E1_DerP2_DerF2  ML domain
    0.00035   20.9   0.0    0.00072   19.9   0.0    1.5  1  TRP_N           ML-like domain
  ------ inclusion threshold ------
      0.053   12.9   0.0      0.095   12.1   0.0    1.4  1  NAR2            High-affinity nitrate transporter accessory


Domain annotation for each model (and alignments):
>> E1_DerP2_DerF2  ML domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.9   0.1   3.1e-25   1.8e-21       2     134 .]      46     174 ..      45     174 .. 0.92

  Alignments for each domain:
  == domain 1  score: 76.9 bits;  conditional E-value: 3.1e-25
                     -EEEES...STTTSSEEEEEEEEEESSECEECTSEEEEEEEEEECSSBBSSEEEEEEEEETTEEEEE-BSSEETCHHHHHHTTTT-SSSB-TCEE CS
  E1_DerP2_DerF2   2 vsfedC...gankddavtvksveisppcplkrgqnltisadgstsdeissglkaevevkvggwikvpfelpetddaCkvlelgegleCPikagey 93 
                     ++ ++C   +   +d vt++ +++ p+ p+k+g+nlti+ ++++ +++ +g ++e+ vk+g ++++  e     d+C++     ++eCP++ag  
      EPX72873.1  46 NPASYCsdwD-RGNDHVTIDYINLLPN-PPKAGKNLTIQGQVDVGTTVLNGSYVEIVVKYG-FVPIVRE---RLDICEQAYELAAVECPVEAGVI 134
                     6789**8654.57778889******99.********************************9.7999999...77*****999999********99 PP

                     EEEEEEEES-CCCHSCEEEEEEEEEECTTEEEEEEEEEEEE CS
  E1_DerP2_DerF2  94 vtytlslplpselpngkyrvelelldedgkeltCvkidvsi 134
                      + + ++plp  +p+g+y v ++++++++++ltCv ++vs+
      EPX72873.1 135 -KKEATIPLPWAIPPGRYYVVAKAYNANDEQLTCVSATVSF 174
                     .66**********************************9985 PP

>> TRP_N  ML-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   1.2e-07   0.00072      14     134 ..      60     173 ..      45     176 .. 0.76

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 1.2e-07
       TRP_N  14 qftaskfdvtftpdnk....tvvfnvtgtssienkavtlelkveaygyevv.netvdpCdan...vkglCPlgpgfkinasgvlkvseevvseipsiaY 104
                  +t+++++   +p++     t+ ++v+  +++ n  + +e+ v+ yg+ ++ +e++d+C++     +  CP+++g  i+ +          ++ip + +
  EPX72873.1  60 HVTIDYINLLPNPPKAgknlTIQGQVDVGTTVLNG-SYVEIVVK-YGFVPIvRERLDICEQAyelAAVECPVEAG-VIKKE----------ATIP-LPW 144
                 666666666665555455569999**988888877.78888777.6665555**********9988999******.77777..........4555.579 PP

       TRP_N 105 sipdldatvrvriystgeateiaCvsatit 134
                 +ip    +v  + y + + +++ Cvsat++
  EPX72873.1 145 AIPPGRYYVVAKAY-NANDEQLTCVSATVS 173
                 99999999999889.44889*******997 PP

>> NAR2  High-affinity nitrate transporter accessory
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   1.6e-05     0.095      91     122 ..     135     166 ..     113     179 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 1.6e-05
        NAR2  91 ngsveytierdiptatYfvrayavdasgeeva 122
                 +++ ++ ++  ip+++Y+v a a++a++e+++
  EPX72873.1 135 KKEATIPLPWAIPPGRYYVVAKAYNANDEQLT 166
                 56789999********************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       341  (0.0190195); expected 358.6 (0.02)
Passed bias filter:                      324  (0.0180713); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.33s 00:00:00.90 Elapsed: 00:00:00.55
# Mc/sec: 1008.24
//
Query:       EPX72874.1  [L=755]
Description: cell division control protein Cdc5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.8e-35  121.6   6.0    3.8e-35  121.6   6.0    3.1  3  Myb_Cef          pre-mRNA splicing factor component
    1.2e-22   79.8   6.2    8.7e-12   45.0   1.2    2.9  2  Myb_DNA-binding  Myb-like DNA-binding domain
    2.6e-19   69.2   7.4    3.9e-13   49.4   3.4    2.9  2  Myb_DNA-bind_6   Myb-like DNA-binding domain


Domain annotation for each model (and alignments):
>> Myb_Cef  pre-mRNA splicing factor component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.7   5.6       2.3   1.4e+04      81     126 ..     152     197 ..     138     220 .. 0.56
   2 ?   -1.7   1.2      0.29   1.7e+03     114     146 ..     289     320 ..     249     341 .. 0.69
   3 !  121.6   6.0   6.3e-39   3.8e-35       7     233 ..     411     615 ..     406     620 .. 0.84

  Alignments for each domain:
  == domain 1  score: -4.7 bits;  conditional E-value: 2.3
     Myb_Cef  81 vvpeeeeeee.eeeeeeeekveeDaadidarkkaereaeeekelkrr 126
                  ++e+e+e + +e ++  ++++  +a ++ r+k+ +  ++  +l++r
  EPX72874.1 152 DMDEDEKE-MlSEARARLANTQGKKAKRKDREKQLELTKRLSQLQKR 197
                 44444443.22222223333444444444444444444444444444 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.29
     Myb_Cef 114 ereaeeekelkrrsqvvqrnLPRPaevneevlr 146
                  ++ ++ +e ++ s+  + nLP P +vne+ l 
  EPX72874.1 289 DEKMRRLAEAEQMSKRRKLNLPAP-QVNEDELD 320
                 333334444444444445566655.34555555 PP

  == domain 3  score: 121.6 bits;  conditional E-value: 6.3e-39
     Myb_Cef   7 atPfrt..akaegaTprrgvatPlrTplRDkLniNeeesllvgetpreekqrqkeakeqLrsgLasLPkPkndyeivvpeeeeeeeeeeee.eeekvee 102
                 a P+r+  +++    p+++ atP rTp RD+++iN+ ++    +  +++k ++k + ++L s +a+LPkPk dye++ p  ++e    +ee +ee +ee
  EPX72874.1 411 AKPVRSavSTNGDGLPSSQ-ATPYRTP-RDTFAINRANQ--NAQAIADSK-AKKLKAKELMSLFAKLPKPKDDYELMEPRFANE----TEElSEERMEE 500
                 7899995436777778777.*******.********875..344445544.4555556799******************99975....3334689**** PP

     Myb_Cef 103 DaadidarkkaereaeeekelkrrsqvvqrnLPRPaevneevlreslsspaneeapltdlqkaeelIkkEmltllhhDalknPlkskkgaaqheaylea 201
                 Daad+++r ++  ++ e+ + +r+sqv+q++LPRP  ++ +  +++++s             ae+l+ +E+  l++ D + +P+   ++    +  ++ 
  EPX72874.1 501 DAADRERRIQEHLAHMERLAQERQSQVIQKGLPRPNIIQPSSWKKACKS----------GSSAESLVFQELYALVASDGISHPT---SS---MKMKEKV 583
                 **************************************99999944444..........3479*********************...33...3468899 PP

     Myb_Cef 202 spyeefedeeleaAkellkeEmevvkgemghg 233
                 s++ e++++el++ k+++ +E+ + + + +++
  EPX72874.1 584 SKVAEISNDELDKCKAMVLQELGSSQDKTDKN 615
                 **********************9988776665 PP

>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.0   1.2   1.5e-15   8.7e-12       2      45 ..       5      49 ..       4      50 .. 0.96
   2 !   36.5   0.3     7e-13   4.2e-09       2      46 .]      57     100 ..      56     100 .. 0.95

  Alignments for each domain:
  == domain 1  score: 45.0 bits;  conditional E-value: 1.5e-15
                     SSSBHHHHHHHHHHHHHHT.TCHHHHHHHHTSS-HHHHHHHHHHH CS
  Myb_DNA-binding  2 gkWteeEdelLleavkkhG.nrWkkIaerlggRtekqcrsrwrny 45
                     g+W   Ede+L  av k+G n+W++I++ l  +t+kqc+ rw+ +
       EPX72874.1  5 GAWKNTEDEILKAAVSKYGkNQWARISSLLVRKTPKQCKARWYEW 49
                     89*****************999********************987 PP

  == domain 2  score: 36.5 bits;  conditional E-value: 7e-13
                      SSSBHHHHHHHHHHHHHHTTCHHHHHHHHTSS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 gkWteeEdelLleavkkhGnrWkkIaerlggRtekqcrsrwrnyl 46 
                       +W+ eEde+Ll + k++  +W++Ia  + gRt+ qc +r++++l
       EPX72874.1  57 TEWSREEDEKLLHLAKLLPTQWRTIAPIV-GRTATQCLERYQKLL 100
                      68***************************.6************97 PP

>> Myb_DNA-bind_6  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.4   3.4   6.5e-17   3.9e-13       1      60 []       7      67 ..       7      67 .. 0.96
   2 !   30.3   0.1   6.1e-11   3.6e-07       1      46 [.      59     102 ..      59     110 .. 0.92

  Alignments for each domain:
  == domain 1  score: 49.4 bits;  conditional E-value: 6.5e-17
  Myb_DNA-bind_6  1 WteeEdeiLlklvekyg.ndWknIaealnrRtpkqcfdrwknkLrpkisrkkwskeedirL 60
                    W   EdeiL   v+kyg n+W  I++ l r+tpkqc+ rw + ++p+i++++ws+eed++L
      EPX72874.1  7 WKNTEDEILKAAVSKYGkNQWARISSLLVRKTPKQCKARWYEWIDPSIKKTEWSREEDEKL 67
                    9999************9569********88****************************998 PP

  == domain 2  score: 30.3 bits;  conditional E-value: 6.1e-11
  Myb_DNA-bind_6   1 WteeEdeiLlklvekygndWknIaealnrRtpkqcfdrwknkLrpk 46 
                     W+ eEde+Ll l +    +W++Ia + + Rt++qc +r+++ L ++
      EPX72874.1  59 WSREEDEKLLHLAKLLPTQWRTIAPIVG-RTATQCLERYQK-LLDD 102
                     ****************************.***********9.6555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (755 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1363  (0.0760221); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.68u 0.29s 00:00:00.97 Elapsed: 00:00:00.48
# Mc/sec: 4732.66
//
Query:       EPX72875.1  [L=225]
Description: rab GTPase binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-10   41.0  13.7    2.2e-10   40.5  13.7    1.2  1  Yip1      Yip1 domain


Domain annotation for each model (and alignments):
>> Yip1  Yip1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.5  13.7   1.2e-14   2.2e-10       6     167 ..      70     213 ..      65     224 .. 0.79

  Alignments for each domain:
  == domain 1  score: 40.5 bits;  conditional E-value: 1.2e-14
        Yip1   6 revfrrlkkepp.....ilrapdlallllalltlllgllaslnlgqtlasgeevqgltlssllgaiiggylglllgllllalllhliakllggkgsfkq 99 
                 r++ ++l   ++     +lr++dl+++l++ l +   l++             +++    s++++++++++   +g ++ +l ++l    lg ++s+ q
  EPX72875.1  70 RAIGKKLVYILYpknaeVLRDWDLWGPLIFSLVISICLALP------------ASKSDRESIFTVVFALIW---FGEAICSLNIKL----LGANISIFQ 149
                 555566666666777889999*****998766655555555............457778888888888888...9***********....********* PP

        Yip1 100 tlsvvgyallPlilgaliaillllllgtllllvgllaliWslvllylglkaahnlskkkallaalill 167
                 +++++gy+++Pl+++++++ +l  l++   + v+++  +W++++  + l+ +  ++  k +laa  l+
  EPX72875.1 150 SICILGYSSFPLVISSVVCSFLDQLYIR--IPVIVAMYAWATFASLGVLQNSNLVN--KKFLAAYPLF 213
                 *********************9999886..99999999999988888888887776..5555555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       438  (0.0244297); expected 358.6 (0.02)
Passed bias filter:                      211  (0.0117686); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 1610.17
//
Query:       EPX72876.1  [L=368]
Description: recombinase Rhp51 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   4.4e-129  429.2   0.0   5.4e-129  428.9   0.0    1.1  1  Rad51         Rad51
    6.4e-12   45.5   0.0    8.9e-12   45.0   0.0    1.1  1  RecA          recA bacterial DNA recombination protein
    2.5e-10   40.2   0.0    3.6e-10   39.7   0.0    1.2  1  AAA_25        AAA domain
    4.6e-06   27.2   0.2    1.3e-05   25.7   0.2    1.8  1  HHH_5         Helix-hairpin-helix domain
    4.6e-06   26.2   0.2    1.1e-05   24.9   0.2    1.6  1  ATPase        KaiC
  ------ inclusion threshold ------
      0.018   14.4   0.1      0.091   12.1   0.0    1.9  2  DnaB_C        DnaB-like helicase C terminal domain
       0.14   12.2   0.8       0.35   10.9   0.1    2.0  2  ssDNA_TraI_N  single-stranded DNA binding TraI N-terminal sub


Domain annotation for each model (and alignments):
>> Rad51  Rad51
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  428.9   0.0  2.1e-132  5.4e-129       1     254 [.     109     360 ..     109     361 .. 0.99

  Alignments for each domain:
  == domain 1  score: 428.9 bits;  conditional E-value: 2.1e-132
                 -S-EBHHHHHHHHHSS-EE--S-HHHHHHHTSSEESSSEEEEEESTTSSHHHHHHHHHHHTTS-TTTS--SSEEEEEESSS---GGGGHHHHHHTT--H CS
       Rad51   1 lgfvsavellekrsellqlttGskklDelLgGGietgsiteifGefrsGktqlchtlcvtvqlplelgGgegkavyidtegtfrperlveiaerykldk 99 
                 +gf++a+e++ +rsel+++ttGsk+lD+lL+GG+etgsite+fGefr+Gk+q+chtl+vt+qlp+++gGgegk++yidtegtfrp rl+++a+ry+l++
  EPX72876.1 109 MGFTTATEYHIRRSELITITTGSKQLDTLLQGGVETGSITELFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLYIDTEGTFRPVRLLAVADRYGLNG 207
                 79************************************************************************************************* PP

                 HHHGGGEEEEE--STTHHHHHHHHTHHHHHHS-EEEEEEETTTGGGCH-------THHHHHHHHHHHHHHHHHHHHH--EEEEEEE-------.----- CS
       Rad51 100 eevlenvayaRaytiehqeellqqaaallaedkfallivDsvtalyRtdfsgrgelakRqqklgkllrtLrkladefevavvitnqvvaqvdgqaalfs 198
                 eevl+nvayaRay+++hq ellqqaa++++e++f++l+vDs+talyRtdfsgrgel++Rq++l++++rtL++ladef++avvitnqvvaqvdg    f+
  EPX72876.1 208 EEVLDNVAYARAYNADHQLELLQQAANMMSESRFSMLVVDSCTALYRTDFSGRGELSARQMHLARFMRTLQRLADEFGIAVVITNQVVAQVDG--ISFN 304
                 *********************************************************************************************..99** PP

                 -------HHHHHHHH-SEEEEEEE-STTEEEEEEES-SSS-S-EEEEEEETTEEE- CS
       Rad51 199 adpkkPigGlvlahasttRlalrkgkgeeRivkvvdsPnlpeleavfaigeeGied 254
                 +dpkkPigG++lah+sttRl+lrkg+ge+Ri+k++dsP+lpe+ea+fai+ +G+ d
  EPX72876.1 305 PDPKKPIGGNILAHSSTTRLSLRKGRGEQRICKIYDSPCLPESEAIFAINADGVGD 360
                 ******************************************************98 PP

>> RecA  recA bacterial DNA recombination protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.0   0.0   3.5e-15   8.9e-12      29     222 ..     122     329 ..     102     338 .. 0.76

  Alignments for each domain:
  == domain 1  score: 45.0 bits;  conditional E-value: 3.5e-15
                 ----EE--S-HHHHHHTSSSSEETTSEEEEEESTTSSHHHHHHHHHHHHH......HTT--EEEEESS----HH....HHHHTT--GGG-E....EE-- CS
        RecA  29 lkvetissGslaldialGiGGlpkGriieiyGpessGkttlalhaiaeaq......kkggvaafidaehaldpk....yakklGvdidell....vsqp 113
                  ++ ti++Gs +ld+ l  GG+  G i+e++G   +Gk+ ++  + + +q         g + +id+e ++ p+     a + G++ +e+l     ++ 
  EPX72876.1 122 SELITITTGSKQLDTLLQ-GGVETGSITELFGEFRTGKSQICHTLAVTCQlpidmgGGEGKCLYIDTEGTFRPVrllaVADRYGLNGEEVLdnvaYARA 219
                 56779*********9887.*******************98864444444422211123578**********996333368999*996655433116778 PP

                 SSHHHHHHHHHH...HHTTT--SEEEEE-TTT---STT-..----------HHHHHHHHHHHHHHHHHTTT--EEEEEEE-----.-----.------- CS
        RecA 114 dtGeqaleiada...lvrsgaidlivvdsvaalvpkaei..eGemgdskvglqarlmsqalrkltgaisksntvvifinqireki.Gvmfg.npetttG 205
                  + ++ le++++   ++  +   ++vvds +al   ++    Ge++  ++ l ar+m    r l+   ++  ++v+  nq+  ++ G+ f  +p+   G
  EPX72876.1 220 YNADHQLELLQQaanMMSESRFSMLVVDSCTALYR-TDFsgRGELSARQMHL-ARFM----RTLQRLADEFGIAVVITNQVVAQVdGISFNpDPKKPIG 312
                 8888899887652225666779**********975.4441156777777755.5665....677777788899********99996888876788999* PP

                 HHHHHHH-SEEEEEEEE CS
        RecA 206 Gralkfyasvrldvrri 222
                 G+ l   ++ rl +r+ 
  EPX72876.1 313 GNILAHSSTTRLSLRKG 329
                 **************985 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.7   0.0   1.4e-13   3.6e-10       8     188 ..     120     293 ..     113     297 .. 0.81

  Alignments for each domain:
  == domain 1  score: 39.7 bits;  conditional E-value: 1.4e-13
      AAA_25   8 savsvadlaapppprrwlvkgllpagelallaGapgtGKttlaldlalavatGkpwlgpvapeqgkVlyvsaEdsedelrrRlravgealrddarllvl 106
                 + ++   + +  ++++ l++g +  g+++ l+G   tGK+ ++  la+++ +       +    gk+ly+++E++    + Rl av   + +++++ + 
  EPX72876.1 120 RRSELITITTGSKQLDTLLQGGVETGSITELFGEFRTGKSQICHTLAVTCQLPID----MGGGEGKCLYIDTEGTF--RPVRLLAVADRYGLNGEEVLD 212
                 55556667777789999***999************************99997444....55589***********8..799*********999999999 PP

      AAA_25 107 dlagveslpLfakdrggtlltadvdaleaaieevegvrlvviDplsralgg.....densnsdv..galvealeriarrtgaavllvhH 188
                 ++a     + + +d++ +ll+++    ++ + e  +  ++v+D+++++++      +e s++++  ++++  l+r+a+++g+av+++ +
  EPX72876.1 213 NVAYA---RAYNADHQLELLQQA----ANMMSE-SRFSMLVVDSCTALYRTdfsgrGELSARQMhlARFMRTLQRLADEFGIAVVITNQ 293
                 88775...555555555555554....455556.569**********9998555566777777888*******************9865 PP

>> HHH_5  Helix-hairpin-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.2   5.2e-09   1.3e-05       8      55 ..      56     103 ..      50     105 .. 0.92

  Alignments for each domain:
  == domain 1  score: 25.7 bits;  conditional E-value: 5.2e-09
                 TT--HHHHHHHHTTT--SHHHHHHS-HHHHHTSTTS-HHHHHHHHHHH CS
       HHH_5   8 sGiGpktAlallsaGiesvedlaaadveeLakipGiGkktAeriilel 55 
                 +Gi   +++++++aG+ +ve +a   + +L  i+Gi++ +A++++ e+
  EPX72876.1  56 NGITSTDIKKIHEAGYYTVESIAYTPKRQLLLIKGISEAKADKLLGEA 103
                 89*****************************************99776 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.2   4.2e-09   1.1e-05       2     168 ..     128     298 ..     127     338 .. 0.75

  Alignments for each domain:
  == domain 1  score: 24.9 bits;  conditional E-value: 4.2e-09
      ATPase   2 ktgIeglDeilkgGipegrvvlitGepGtGKtifalqFlikgaeky.....gepgvfvtveepa..edlrenakslGwdlekleeegklaiidasesae 93 
                  tg + lD++l+gG+  g+++ + Ge  tGK+ ++ + +++          + +++++ +e +   + l   a + G + e++ ++  +a+  a++ ++
  EPX72876.1 128 TTGSKQLDTLLQGGVETGSITELFGEFRTGKSQICHTLAVTCQLPIdmgggEGKCLYIDTEGTFrpVRLLAVADRYGLNGEEVLDN--VAYARAYNADH 224
                 7999***********************************9975543111113589******9865589999999***********9..77777766654 PP

      ATPase  94 esaeekdkedleelieelaeaikeikakrvviDsitgl.ay........eekeavaReilrqlvrvlkklgvTailvsekssse 168
                 +           el+++ a++++e + + +v+Ds t+l  +        +++++ + + +r+l r   + g+  ++++++  + 
  EPX72876.1 225 Q----------LELLQQAANMMSESRFSMLVVDSCTALyRTdfsgrgelSARQMHLARFMRTLQRLADEFGIAVVITNQVVAQV 298
                 4..........6899999*******************93221111111123344455566667666688889999998887744 PP

>> DnaB_C  DnaB-like helicase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.22   5.6e+02       2      41 ..     127     167 ..     126     175 .. 0.83
   2 ?   12.1   0.0   3.6e-05     0.091     116     183 ..     227     299 ..     210     312 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.22
                 BXSSTHHHHHHCT.SBXTTXEEEEEEXTTSSHHHHHHHHHH CS
                 xxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      DnaB_C   2 lstgfkdLDklts.GlqkgdliiiAarpsmGktalalniae 41 
                 ++tg k+LD+l++ G++ g ++ + +   +Gk+ ++ ++a 
  EPX72876.1 127 ITTGSKQLDTLLQgGVETGSITELFGEFRTGKSQICHTLAV 167
                 78999****98762699999999999999999999988875 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 3.6e-05
                 HHHHHHHHHHHHTTEEEEEEEEGGGTBTS.CS....SSCCCHHHHHHHHHHHHHHHHCTSXEEEEEEXSGGGC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      DnaB_C 116 eirskarrlkkekglgliviDyLqlmegs.ee....kenreqevseisrsLkalakelnvpvialsqLsrave 183
                 e+ ++a ++ +e++ +++v+D    +  +  +     + r+  +++  r+L+ la e+ + v++  q+  +v+
  EPX72876.1 227 ELLQQAANMMSESRFSMLVVDSCTALYRTdFSgrgeLSARQMHLARFMRTLQRLADEFGIAVVITNQVVAQVD 299
                 6677788888999********988777332223443569***************************9987775 PP

>> ssDNA_TraI_N  single-stranded DNA binding TraI N-terminal subdomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1       2.1   5.5e+03      42      52 ..      92     102 ..      83     103 .. 0.83
   2 ?   10.9   0.1   0.00014      0.35       7      30 ..     278     301 ..     271     302 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 2.1
  ssDNA_TraI_N  42 deLkeegvLGe 52 
                   +e k++++LGe
    EPX72876.1  92 SEAKADKLLGE 102
                   577999***97 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00014
  ssDNA_TraI_N   7 drLAkefaasvkageeSVAQvsGp 30 
                   +rLA ef  +v   ++ VAQv G+
    EPX72876.1 278 QRLADEFGIAVVITNQVVAQVDGI 301
                   69********************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (368 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       418  (0.0233142); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.53u 0.28s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 2442.67
//
Query:       EPX72877.1  [L=106]
Description: 60S acidic ribosomal protein Rpp1-1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-26   93.0  10.0    1.6e-26   92.7  10.0    1.1  1  Ribosomal_60s  60s Acidic ribosomal protein


Domain annotation for each model (and alignments):
>> Ribosomal_60s  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.7  10.0     9e-31   1.6e-26       1      88 []      21     105 ..      21     105 .. 0.93

  Alignments for each domain:
  == domain 1  score: 92.7 bits;  conditional E-value: 9e-31
                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XX--SS--STTT CS
  Ribosomal_60s   1 eptaenikkvlkaagveveaarvkllvkalegkdieellangaaklaaaaaaaaaaaaaaaaaaaaeekkkeeeeeEeedddmGfgLF 88 
                    e+t++++ +++kaa+veve++++++++kalegkd++ell n++++   a+aa+ aaaa+aa++a+aeekk+e+++eEe+d+dmGfgLF
     EPX72877.1  21 EITSDKLLSLTKAANVEVEPIWASIFAKALEGKDLKELLLNIGSG---AGAAPVAAAAPAAGEAPAEEKKEEAKAEEESDEDMGFGLF 105
                    69****************************************988...66888888888888899999999999889*********** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       524  (0.0292264); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.36s 00:00:00.92 Elapsed: 00:00:00.57
# Mc/sec: 558.87
//
Query:       EPX72878.1  [L=396]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.2e-18   65.8   0.0    3.7e-18   65.1   0.0    1.4  1  RRM_1        RNA recognition motif. (a.k.a. RRM, RBD, or RNP 
    1.3e-15   57.5   0.1    3.4e-15   56.3   0.1    1.7  1  CSTF2_hinge  Hinge domain of cleavage stimulation factor subu
    1.1e-08   34.5   1.3    1.9e-08   33.7   1.3    1.4  1  CSTF_C       Transcription termination and cleavage factor C-
  ------ inclusion threshold ------
      0.033   14.3   0.0      0.099   12.8   0.0    1.9  1  RRM_7        RNA recognition motif


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.1   0.0   8.3e-22   3.7e-18       1      70 []       7      77 ..       7      77 .. 0.97

  Alignments for each domain:
  == domain 1  score: 65.1 bits;  conditional E-value: 8.3e-22
                EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1  1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrelk 70
                ++Vgn+p+++ ee++ ++F++ Gp+ks+ l+ d e g++kg++f+e+++   A++A+++ln++  g r+l+
  EPX72878.1  7 VYVGNIPYEMAEEQVTDIFRQSGPVKSFHLIIDpESGQPKGYGFCEYHDTATAASAVRNLNNYDAGTRRLR 77
                8**************************************************************99998875 PP

>> CSTF2_hinge  Hinge domain of cleavage stimulation factor subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.3   0.1   7.5e-19   3.4e-15      15      79 ..     151     215 ..     139     217 .. 0.91

  Alignments for each domain:
  == domain 1  score: 56.3 bits;  conditional E-value: 7.5e-19
  CSTF2_hinge  15 pdaIsktLsslppeqllellsqlKalaqqnpsqarelLkqnpqLayAllqalllmglvdpdvvtk 79 
                   + I +tL +l p++l  +ls +Kal+ + p+qa++lL++npqL+yA++q +++ + + ++ + +
   EPX72878.1 151 NEDIYRTLTQLAPNELDYMLSAVKALCLEAPAQAEQLLAANPQLSYAVFQSMVMKQYIPESSIGD 215
                  57899***************************************************999988765 PP

>> CSTF_C  Transcription termination and cleavage factor C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.7   1.3   4.3e-12   1.9e-08       2      35 ..     357     390 ..     356     394 .. 0.93

  Alignments for each domain:
  == domain 1  score: 33.7 bits;  conditional E-value: 4.3e-12
      CSTF_C   2 dqekaeLlqQVLqLseeqIaaLPpdqRrsImiLr 35 
                 ++ ka+L+ Q ++L++eqI  LP +q+++I++ r
  EPX72878.1 357 EATKAALIAQLMALTDEQISVLPQEQKEKIIEIR 390
                 678****************************987 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   2.2e-05     0.099       1      29 [.       4      32 ..       4      72 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2.2e-05
       RRM_7  1 srkvFvGGlPiDiteeelkatfkefgkvl 29
                s+ v+vG +P ++ ee++++ f++ g+v+
  EPX72878.1  4 SCVVYVGNIPYEMAEEQVTDIFRQSGPVK 32
                899*********************99985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (396 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       646  (0.036031); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.39u 0.21s 00:00:00.60 Elapsed: 00:00:00.47
# Mc/sec: 2548.02
//
Query:       EPX72879.1  [L=260]
Description: ribosomal protein subunit L9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.8e-17   62.3   2.5      3e-16   59.4   1.4    2.0  2  Ribosomal_L3  Ribosomal protein L3


Domain annotation for each model (and alignments):
>> Ribosomal_L3  Ribosomal protein L3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.4   1.4   1.7e-20     3e-16     205     289 ..     145     232 ..     137     237 .. 0.91
   2 !    2.2   0.0    0.0039        70     322     341 ..     235     254 ..     232     259 .. 0.82

  Alignments for each domain:
  == domain 1  score: 59.4 bits;  conditional E-value: 1.7e-20
                   EEECCCCS-TTSEEEEEEEE---EEE-HHHHCT----STTTSSS..SSS-S-SS-.SSSSS--TTS--SEEESCCEEEEEEEEEEEEE CS
  Ribosomal_L3 205 tvavaavFrqgeliDvigvtkGkGfeGvvkRWgvkklprkthrg..lRkvaaiga.wdparVsstvaraGqkGyhhRtelnkkiyrig 289
                   tv  a+ F++++ +D+ gvtkGkGf Gv+kRWg+ +  + ++ +  +R +++ g    p+rV ++ ++aG++G+ + t     i++++
    EPX72879.1 145 TVINADYFQPKQHVDIKGVTKGKGFAGVMKRWGFAGGNASHGASlsHRTPGSTGQnTTPGRVLPGRKMAGRMGHKSSTIEHALIWDVD 232
                   5666899***********************************9999*******97257*****************9999888999886 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.0039
                   SCEEEEES--SSSTTEEEEE CS
  Ribosomal_L3 322 ndfilvkGsvpGpkkrlvkl 341
                    + ilv+G+vpGp+k  v +
    EPX72879.1 235 LNCILVRGAVPGPNKSPVYV 254
                   5789**********987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       301  (0.0167884); expected 358.6 (0.02)
Passed bias filter:                      277  (0.0154498); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.47
# Mc/sec: 1654.19
//
Query:       EPX72880.1  [L=183]
Description: TRAPP complex subunit Bet3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.6e-34  116.2   0.0    1.2e-33  115.9   0.0    1.1  1  TRAPP     Transport protein particle (TRAPP) component


Domain annotation for each model (and alignments):
>> TRAPP  Transport protein particle (TRAPP) component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.9   0.0   6.5e-38   1.2e-33       1     145 [.      22     168 ..      22     169 .. 0.91

  Alignments for each domain:
  == domain 1  score: 115.9 bits;  conditional E-value: 6.5e-38
       TRAPP   1 fafllgelvsylqrdskdveevekrLekmGyrvGlrllelllarer.pretdilevlkfickdlWkllfgkqidnlktnhrge...yvltdnefpltrf 95 
                 f +++g++v++++rd++ +e+v+++LekmGy++G+rl+e++lar++ +r  d++e+++ i+k+++k++++ ++    ++++++   ++l+dn  pl++f
  EPX72880.1  22 FVLTYGSIVAQMCRDMS-YEQVNEELEKMGYNIGIRLIEDFLARTEwQRCVDLRETADTIAKVGFKMFLNVTPVISDWSEEDKtftLTLDDN--PLAEF 117
                 679***********985.99************************998********************************7776677889999..***** PP

       TRAPP  96 velpke.ls...ylaflcGiirGaLenlgfpakVtahelpsdelrgrttfeikv 145
                 velp e  s   y+++lcG++rG Le+++++  V a  + +d lrg++ +++kv
  EPX72880.1 118 VELPVEaRSklwYSNILCGVLRGTLEMVQMD--VDAYFV-HDILRGDEHTNLKV 168
                 ****99622588*******************..999555.56899999999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       570  (0.0317921); expected 358.6 (0.02)
Passed bias filter:                      500  (0.0278878); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1305.51
//
Query:       EPX72881.1  [L=250]
Description: pig-L [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      5e-23   82.2   0.0    6.8e-23   81.7   0.0    1.2  1  PIG-L     GlcNAc-PI de-N-acetylase


Domain annotation for each model (and alignments):
>> PIG-L  GlcNAc-PI de-N-acetylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.7   0.0   3.8e-27   6.8e-23       1     130 [.      35     159 ..      35     160 .. 0.96

  Alignments for each domain:
  == domain 1  score: 81.7 bits;  conditional E-value: 3.8e-27
                 EEEESSTTHHHHHHHHHHHHHHHT.T-EEEEEECE--TT---STTTTHH-HHHHHHHHHHHHHHHHCTE..EEEEECC...CBTT-STTS-CHHHHHHH CS
       PIG-L   1 llvlAHpDDellfaggtiaklvaa.gvevkivcltaGdagsplatleekeelaeiRekEaraaakhlgvadedvffld...fpDgslesydedellddl 95 
                 l+++AHpDDe++f+g+t+++l ++ +v+v+++cl++G+a+          +l+++R+ E+ +aa   +++++++ +l+   ++Dg++e++d   + + +
  EPX72881.1  35 LFIFAHPDDESMFFGPTLEYLSKHrNVQVHLLCLSNGNAD----------GLGNLRQTELVNAASQFQIPKSNIKILSdkrLRDGMYERWDPIVIGKHV 123
                 79********************987***************..........************************************************* PP

                 HHHHHHH--SEEEEE-TTTT.H-HHHHHHHHHHHHH CS
       PIG-L  96 aklieryrPdvvltldpegd.dhpDHtavasaavaa 130
                  +++ + + ++ +t+d++g+ +hp+H+a+  +a +a
  EPX72881.1 124 YDYMIDKNIRLAITFDKDGIsGHPNHKACFYGALNA 159
                 ****88889********************9888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       641  (0.0357521); expected 358.6 (0.02)
Passed bias filter:                      476  (0.0265492); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.29s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 1687.13
//
Query:       EPX72882.1  [L=226]
Description: 2 OG-Fe(II) oxygenase superfamily protein Ofd2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.3e-13   49.4   0.0    8.1e-13   49.0   0.0    1.2  1  2OG-FeII_Oxy_2  2OG-Fe(II) oxygenase superfamily


Domain annotation for each model (and alignments):
>> 2OG-FeII_Oxy_2  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.0   0.0   4.5e-17   8.1e-13      70     196 .]      81     217 ..      55     217 .. 0.85

  Alignments for each domain:
  == domain 1  score: 49.0 bits;  conditional E-value: 4.5e-17
  2OG-FeII_Oxy_2  70 lspfpeallrlverlvkaag...pegwspnaalvnfYrdgariglHqDkeesaleapivSlSLGasatfrfgkesreeeiiailLesGdllvmgg 161
                     + pfpe ++rl + l ++      ++  ++a +++ Y +g+ i  H+D +   + + ++  S+ +  t+ f+    ++  ++++L+ G+l+vm g
      EPX72882.1  81 YVPFPEPIQRLNNYLPSEFLsdvWKNQPAEASIIQVYNPGDGIIPHKDLD--MFADGVAIYSFLSDMTMVFKLP-SKKLKCDVRLQKGSLVVMRG 172
                     66788888888887776554666778899*********************..589****************986.557899************** PP

  2OG-FeII_Oxy_2 162 esrkay.Hgvprikkdtapele.........leelrtrRinlTfR 196
                     ++r+++ H +p    d+ +++              r++R+++T+R
      EPX72882.1 173 PARYEWlHEIPFRGGDWISSSSqdnatasnqTWTPRNQRFSITMR 217
                     ***********9999954444445666777777899********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       339  (0.0189079); expected 358.6 (0.02)
Passed bias filter:                      306  (0.0170673); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1743.00
//
Query:       EPX72883.1  [L=118]
Description: 60S ribosomal protein L22 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.3e-45  152.3   1.3    6.5e-45  152.0   1.3    1.0  1  Ribosomal_L22e  Ribosomal L22e protein family


Domain annotation for each model (and alignments):
>> Ribosomal_L22e  Ribosomal L22e protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.0   1.3   3.6e-49   6.5e-45       2     109 .]       8     115 ..       7     116 .. 0.97

  Alignments for each domain:
  == domain 1  score: 152.0 bits;  conditional E-value: 3.6e-49
  Ribosomal_L22e   2 kklkftidcskpvedkildvaefekfLkerikvngktgnlgdkveieregkskvtvtsevkfskrylkyltkkyLkkkqlrdwlrvvasskesYe 96 
                     +++k++id+++ v+dki+d+++fek+L +rikv+gktgnlg++v ++reg+skv v ++++fs+rylkyltkk+Lkk++lrdwlrvv+++k  Ye
      EPX72883.1   8 VSNKYVIDATAAVNDKIFDISAFEKYLIDRIKVDGKTGNLGSSVVVSREGSSKVAVIAHIDFSGRYLKYLTKKFLKKHSLRDWLRVVSTKKGVYE 102
                     678******************************************************************************************** PP

  Ribosomal_L22e  97 Lryfnieedeeee 109
                     Lry+n+   ++ee
      EPX72883.1 103 LRYYNVVVGNDEE 115
                     *****99877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       566  (0.031569); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 892.53
//
Query:       EPX72884.1  [L=587]
Description: eukaryotic protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.1e-111  373.0   2.0   2.6e-111  372.7   2.0    1.1  1  DUF3808   Protein of unknown function (DUF3808)
  ------ inclusion threshold ------
       0.15   12.4   2.8         22    5.4   0.0    3.4  3  TPR_12    Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> DUF3808  Protein of unknown function (DUF3808)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  372.7   2.0  2.9e-115  2.6e-111       2     477 .]      38     498 ..      37     498 .. 0.93

  Alignments for each domain:
  == domain 1  score: 372.7 bits;  conditional E-value: 2.9e-115
     DUF3808   2 qaldlvLndkfeeaeellkeaskeSslhalgrgviafleAvltfepekmkkAsealkeaeklceksrkkaqkneskqnlssdslyepgleaevcyaeal 100
                  + dl+Lnd++++ +e +++ + eS    +g++  af+ A+l++ep ++++A + l  ae+ + ++rk  ++++         +y++g e+++c+ +  
  EPX72884.1  38 HGFDLMLNDDVTGTKEVFNNDTVES---CIGKAGNAFYHAILGLEPTAIEEAWNCLILAEQQADERRKFMENHN----F-RLGSYPNGYEYQLCVCDLS 128
                 789***************8655554...567777789***************************8888888888....3.3589*************** PP

     DUF3808 101 LlkAlLtflseslvefiKgglklRkaYqiykeilkeikklekkkrskteeeeesllseeknsqaeideflesGvnlgfGilqlviSllPpailklLsvv 199
                 L++++L+f+  sl++ +K++++lRk++  + +++++++++++kk++ + + ++      + +++ +def+esGv++g+G+l+++iSll p+il++Ls++
  EPX72884.1 129 LMQSILGFVAGSLLDNVKSAYRLRKTFLSFTKMMEHVREIQQKKETGELQVND------P-NAQFVDEFIESGVSTGYGVLTFLISLLSPSILRVLSFF 220
                 ****************************************9988886333333......3.478*********************************** PP

     DUF3808 200 GFsGdreeGLrlLweasksrnlraalallaLlfYytgvvqvldi...ddglkapleeleelLlksrkrfPksalwllfearieslkgnldeAlelleei 295
                 + +G+r+++++l+w+a+ ++n+++a+all+L++++++v++  +i   d     +l+++++ +  +r+r++++a+w++++++++ l g+ ++Alel ++ 
  EPX72884.1 221 SMHGNRKDAVQLMWKATAYPNMQGAIALLCLYAFNAMVQSSASIvplD--YANELSRCQDGINSVRQRYSNGAIWAVMQGKLYYLRGDSEKALELEKTR 317
                 ********************************************5422..5889*******************************************76 PP

     DUF3808 296 ieesqselkqvkhlclfelaltlvylheykeaaesfleLlklskwSkalYtYlaaacllelgre........ekkaeakekaeelfkevpkllqkkagk 386
                 i   + +++q+ ++  f++a+ +v  +++keaa+++l+L +l++wS+++Y+++a++c+l++ re        e+ + +  ka+e++k++p+l+qkk+++
  EPX72884.1 318 I---DTSMEQIIAMKGFDTAMLYVGIRKFKEAAQAILDLEDLNSWSHSFYRFFAGCCMLQHSRElknnggnkEESEIYSAKASEYLKQSPTLVQKKKKR 413
                 5...89****************************************************************998888899******************** PP

     DUF3808 387 slplekFilrKverfkarkkekkselldavlvspvlEliYvwngfsrmskeeleeesvkkleekaankeseeeeDdellkkLLkglvlrrl 477
                  lp+e +++rKv+++++r+++ k++l+da+ ++p++EliY++  +     ++ +     +le+++++     e Dd +l+++L+++v r+l
  EPX72884.1 414 VLPVEMYLVRKVQKWEDRAAKLKVDLVDAMDIPPYIELIYIFVTWCLNNPKHVL-ILRSELEQCQCT-----EDDDVALREFLLAVVERHL 498
                 *********************************************999999999.788888888666.....67999************97 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0    0.0039        35      48      69 ..     294     315 ..     284     319 .. 0.83
   2 ?    5.4   0.0    0.0025        22       8      33 ..     490     515 ..     483     523 .. 0.86
   3 ?   -0.8   0.3      0.21   1.9e+03      22      46 ..     538     560 ..     531     578 .. 0.68

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0039
      TPR_12  48 lrnLgrlyralgryeeAlelle 69 
                     g ly+++g+ e+Alel +
  EPX72884.1 294 AVMQGKLYYLRGDSEKALELEK 315
                 556799************9865 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.0025
      TPR_12   8 nlaavlrrlgrydeAlellekaleia 33 
                  la+v+r+l++++ +++ l +++++ 
  EPX72884.1 490 LLAVVERHLKDFESSRARLIRVMNMN 515
                 59*****************9999865 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 0.21
      TPR_12  22 AlellekaleiarrllGpdhpltat 46 
                 Ale+  kale+ r++  ++ +  a+
  EPX72884.1 538 ALEWDMKALEAEREV--TQQLKKAQ 560
                 666677777776666..55544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (587 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       744  (0.041497); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 4373.08
//
Query:       EPX72885.1  [L=380]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-08   34.9   4.2    2.3e-08   34.0   4.2    1.5  1  WW        WW domain


Domain annotation for each model (and alignments):
>> WW  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.0   4.2   1.3e-12   2.3e-08       1      31 []       8      40 ..       8      40 .. 0.98

  Alignments for each domain:
  == domain 1  score: 34.0 bits;  conditional E-value: 1.3e-12
                X-TTEEEEE-TTTT-EEEEETTT..--EESS-- CS
          WW  1 LPpGWeeqwdpdsGrvYYyNheT..getqWekP 31
                LP+GW++qwd+++++++Y+N++   ++ qWe P
  EPX72885.1  8 LPEGWVAQWDSQYKCYFYVNERSpnPTPQWESP 40
                8******************************88 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (380 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       377  (0.0210274); expected 358.6 (0.02)
Passed bias filter:                      241  (0.0134419); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.21s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2912.98
//
Query:       EPX72886.1  [L=583]
Description: maltase alpha-glucosidase Mal1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   8.8e-109  364.1   0.3   1.2e-108  363.6   0.3    1.2  1  Alpha-amylase    Alpha amylase, catalytic domain
    2.2e-08   34.1   0.0    5.4e-08   32.9   0.0    1.6  1  Malt_amylase_C   Maltogenic Amylase, C-terminal domain
    5.3e-05   23.6   0.0    0.00017   22.0   0.0    1.8  1  Alpha-amylase_C  Alpha amylase, C-terminal all-beta domain
  ------ inclusion threshold ------
      0.024   13.9   0.1      0.085   12.2   0.0    1.9  2  Glyco_hydro_114  Glycoside-hydrolase family GH114


Domain annotation for each model (and alignments):
>> Alpha-amylase  Alpha amylase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  363.6   0.3  2.7e-112  1.2e-108       1     333 [.      36     392 ..      36     396 .. 0.97

  Alignments for each domain:
  == domain 1  score: 363.6 bits;  conditional E-value: 2.7e-112
                    --CHHHHCTCCCCCCCT-SCEEE-B-CE-S-TTTTSS-SCECCE-CCC--CCCCCCHHHHHHCTT-EEEEEE--SC--TTSCCCHCCHHSTTSGGG CS
  Alpha-amylase   1 GDLkGiiekLdYlkeLGvtaiwlsPifkspqadhgYdiadytkidpefGtnedlkeLiskahekgikvilDlVvNHtsdehewfkeslkkkgepkr 96 
                    GDL+Gi +kLdYlkeL v++iwlsPi+ sp +d+gYd+++y++id ++G  ed   L +++h++g+k+++DlV NHtsd+h+wfkes+++k++pkr
     EPX72886.1  36 GDLQGILSKLDYLKELNVESIWLSPIYPSPLKDMGYDVSNYKEIDARYGSLEDTIVLAKELHKRGMKLVMDLVLNHTSDQHDWFKESRSSKTNPKR 131
                    9*********************************************************************************************** PP

                    CCC-E..........ESS-STTC-TTTTCSCEECTTTTCEEESSS-TTS-BB-TTTCCCCCCCCCCCCCCCTTT-SEEEETTCCCTTTCCCC.... CS
  Alpha-amylase  97 dyyiwkegk....eekeppnnwkslfdgsaweydekaqeyylhlflkklpdLnteneevrkelkdvvkfwlekgidGfRlDvvkhvskveal.... 184
                    d+yiw++ k    +++ ppnnw+s+fd sawe+de ++eyylhl + ++pd+n+e++e+rk+++d+v+fwle+g+dGfRlDv++++sk++++    
     EPX72886.1 132 DWYIWRPAKynkdGKRLPPNNWRSYFDTSAWEWDEATEEYYLHLWAPEQPDINWESPELRKAVYDIVRFWLERGVDGFRLDVINMISKNQEFpdap 227
                    ********99999999************************************************************************9998**** PP

                    ..............HCCHCCHHHHHHHHHHHTCCGTT-EEEEE-TT.-SCCCHCCCC-CGG-SICECCITTCGGGCC-CTS.TTSB-SS-HHHHHH CS
  Alpha-amylase 185 ..............esngeflheftqalnetvasrkevmtvgEvss.dasedlrvyttearlelemvldfphldvaqkaki.keqlksisakklke 264
                                  + ng+++he+ ++l e   ++++++ vgE+ + +++e+  + + ++r el+m+++f  ++++  + + k+   + ++ +lk+
     EPX72886.1 228 itddrydyqmgykyYANGPRIHEYLKELGEIL-HEYNAFSVGEMPHvEDTEEVLRVVGADRRELTMIFQFDLVSLDLVPGKhKYVEGTWKLSDLKK 322
                    *****************************887.9999*******87367888999999******************99998799999999****** PP

                    HHHHHHHHS-CCCTTCEEES--TTS--HHHHTTSSTTTT.HHHHHHHHHCCCTSSSEEEEETTCCCT--- CS
  Alpha-amylase 265 llkkwlkaleeaaeeavtflgnHDqeRilsrlgddsaea.ekklklaaillltlrGvpviYyGeEigmtg 333
                     +kkw++ + +   +++ f++nHDq+R +sr+ +ds+++  ++ kl+a++++   G+p++Y+G+E+ +++
     EPX72886.1 323 SVKKWQSVYLKGGGWNASFIENHDQPRTVSRYLSDSPAYrAQSSKLMALFIVFQGGTPFVYQGQELALAN 392
                    ************************************9999*************************98877 PP

>> Malt_amylase_C  Maltogenic Amylase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.9   0.0   1.2e-11   5.4e-08       1      72 [.     504     573 ..     504     575 .. 0.84

  Alignments for each domain:
  == domain 1  score: 32.9 bits;  conditional E-value: 1.2e-11
                     -EEEE---S-TTEEEEEEEETTEEEEEEEESS-EEEEE--GGGTT-EEEETTTTEE-----SSEEEEE-TT- CS
  Malt_amylase_C   1 GsfefleadnrkvlaYlReyedetilvvaNrsaqaveldlselagrvpvelfggeefpaigelytltLppyg 72 
                     Gsfe+l+++++++ a++Re++   +lv++N+++++v+ +++ l+ + +  l+++ e   i+e+  + L+py+
      EPX72886.1 504 GSFELLSEEDPSIVAFVRESKSTELLVILNFTENSVHYECP-LQIGGFNVLLNNYEDLEIKEN-VVHLNPYQ 573
                     9****************************************.666666666777554455554.68898886 PP

>> Alpha-amylase_C  Alpha amylase, C-terminal all-beta domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0   3.7e-08   0.00017       6      53 ..     511     556 ..     507     573 .. 0.78

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 3.7e-08
                      ETTSSEEEEEECTTT.EEEEEEE-SSSSEEECEEESSSSSEEEEETTCT CS
  Alpha-amylase_C   6 deenkviaFeRgdge.kllvvfNfhpsnsrqdyrvgvpaagkyrdvlnt 53 
                      +e+++++aF+R++++ +llv++Nf+ +++++++++  +  g + ++ln 
       EPX72886.1 511 EEDPSIVAFVRESKStELLVILNFTENSVHYECPL--Q-IGGFNVLLNN 556
                      6889*********8889*********888777777..4.4557777754 PP

>> Glyco_hydro_114  Glycoside-hydrolase family GH114
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   1.9e-05     0.085      53     160 ..     152     259 ..     141     282 .. 0.75
   2 ?   -3.1   0.0      0.87   3.9e+03      71      86 ..     393     409 ..     377     415 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.9e-05
  Glyco_hydro_114  53 dwrp..daddf.npasvlgkkldgWpgerwldirtaakrsskvrsimkaridlaaakGfdgvepDnvDsyesndtgfl..ltaadqlayvkfla 141
                      +wr+  d++++ ++++     l  W+ e+  di+   ++s ++r+ + ++++  +++G dg+ +D ++   s+++ f+     +d+ +y     
       EPX72886.1 152 NWRSyfDTSAWeWDEATEEYYLHLWAPEQ-PDIN---WESPELRKAVYDIVRFWLERGVDGFRLDVINMI-SKNQEFPdaPITDDRYDYQMGYK 240
                      67777766666534434444567999999.8999...*********************************.67778886633455667766666 PP

  Glyco_hydro_114 142 aeaharglaiglknageli 160
                       +a+ +     lk  ge++
       EPX72886.1 241 YYANGPRIHEYLKELGEIL 259
                      6666666666666555555 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 0.87
  Glyco_hydro_114  71 ld.gWpgerwldirtaa 86 
                      +  +Wp + ++di t++
       EPX72886.1 393 IPrDWPVSEYVDIETQN 409
                      4449**9999**99665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (583 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       426  (0.0237604); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 4092.81
//
Query:       EPX72887.1  [L=148]
Description: hypothetical protein SOCG_00649 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      0.003   17.9   2.4      0.003   17.9   2.4    1.6  2  Snapin_Pallidin  Snapin/Pallidin
     0.0093   15.7   0.7      0.013   15.1   0.7    1.1  1  RPW8             Arabidopsis broad-spectrum mildew resistance
  ------ inclusion threshold ------
      0.012   16.0   5.8      0.028   14.9   5.5    1.8  2  Cep57_MT_bd      Centrosome microtubule-binding domain of Cep
      0.017   15.4   2.0      0.026   14.8   2.0    1.3  1  DUF4164          Domain of unknown function (DUF4164)
      0.023   14.6   0.6      0.029   14.3   0.6    1.2  1  Cauli_AT         Aphid transmission protein
      0.026   14.7   0.8      0.045   14.0   0.7    1.5  1  XhlA             Haemolysin XhlA
      0.051   14.0   0.5      0.068   13.6   0.5    1.2  1  HrpB7            Bacterial type III secretion protein (HrpB7)
      0.055   13.0   3.0       0.07   12.7   3.0    1.1  1  Fzo_mitofusin    fzo-like conserved region
      0.064   12.6   2.2      0.082   12.2   2.2    1.1  1  CorA             CorA-like Mg2+ transporter protein
      0.064   13.7   0.4      0.099   13.1   0.4    1.3  1  NPV_P10          Nucleopolyhedrovirus P10 protein
       0.11   12.3   6.3       0.15   11.9   4.9    1.9  2  GIT_CC           GIT coiled-coil Rho guanine nucleotide excha
       0.17   12.2   2.7       0.27   11.6   2.7    1.4  1  CCDC-167         Coiled-coil domain-containing protein 167
       0.22   11.9   2.8        5.8    7.3   1.1    2.4  2  Csm1_N           Csm1 N-terminal domain
       0.28   11.1   4.3          1    9.3   0.2    2.5  2  Rsd_AlgQ         Regulator of RNA polymerase sigma(70) subuni
       0.29   11.4   5.8        2.2    8.5   5.0    2.0  2  Cortex-I_coil    Cortexillin I, coiled coil
       0.34   10.9   7.1      0.079   12.9   3.5    1.7  2  Prefoldin_2      Prefoldin subunit
       0.41   10.9   3.2       0.94    9.8   2.6    1.9  1  Retrotrans_gag   Retrotransposon gag protein


Domain annotation for each model (and alignments):
>> Snapin_Pallidin  Snapin/Pallidin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       6.3   6.7e+03      64      64 ..      45      45 ..      22      58 .. 0.58
   2 !   17.9   2.4   2.9e-06     0.003       3      60 ..      62     118 ..      60     128 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 6.3
  Snapin_Pallidin 64 K 64
                     +
       EPX72887.1 45 R 45
                     2 PP

  == domain 2  score: 17.9 bits;  conditional E-value: 2.9e-06
  Snapin_Pallidin   3 LaegllellepkldeldeklkelrqsQeeLleqldrlnekLkeleeaqeaevlpdlke 60 
                      L++  +  l+ +l++l e++++l+q Q+ L+e+l + +++L e  e q+ ++++++++
       EPX72887.1  62 LSQDHMFELKQTLETLSERVHKLEQGQNSLREELMQTQNSLIERLEGQS-DLISRIQK 118
                      677777789********************************87777776.77777766 PP

>> RPW8  Arabidopsis broad-spectrum mildew resistance protein RPW8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.7   1.3e-05     0.013       7      83 ..      40     117 ..      40     124 .. 0.91

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.3e-05
        RPW8   7 AalgaalgellkaileakkksldfksilkrLestleritPvvkeieklnkel.drpreeieeLkklLekaekLVekcs 83 
                 A++++ l +llka+   ++  +  +  + +L++tle+++  v+++e+ ++ l ++  +  ++L+++Le   +L+++  
  EPX72887.1  40 ALFEQRLANLLKALASKFQGESLSQDHMFELKQTLETLSERVHKLEQGQNSLrEELMQTQNSLIERLEGQSDLISRIQ 117
                 67888999999999999999999999999***********************99999999********9999998765 PP

>> Cep57_MT_bd  Centrosome microtubule-binding domain of Cep57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0         2   2.1e+03      54      64 ..      43      53 ..      19      63 .. 0.63
   2 ?   14.9   5.5   2.6e-05     0.028      21      76 ..      64     118 ..      42     119 .. 0.94

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 2
  Cep57_MT_bd 54 aeeleelvkrl 64
                 +++l +l+k+l
   EPX72887.1 43 EQRLANLLKAL 53
                 44444444444 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 2.6e-05
  Cep57_MT_bd  21 edEfehlklelqelaaqynaldpslgkrkRkdLaeeleelvkrlEaKadqIykLyd 76 
                  +d + +lk  l++l+++ ++l+   +++ R++L++  + l++rlE  +d I+++++
   EPX72887.1  64 QDHMFELKQTLETLSERVHKLE-QGQNSLREELMQTQNSLIERLEGQSDLISRIQK 118
                  6677789999***********9.99***************************9986 PP

>> DUF4164  Domain of unknown function (DUF4164)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   2.0   2.5e-05     0.026       4      77 ..      44     117 ..      37     122 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 2.5e-05
     DUF4164   4 keleaaltrLeaaldsLEkavdrrleaerkrdeleaeiealgedrsRLaeeLdqaearaarleevnrEvsrrLk 77 
                 ++l++ l+ L  +++    + d+++e +++ + l +++++l++ ++ L eeL+q+++ + +  e+++++ +r++
  EPX72887.1  44 QRLANLLKALASKFQGESLSQDHMFELKQTLETLSERVHKLEQGQNSLREELMQTQNSLIERLEGQSDLISRIQ 117
                 5667777777777777666778899999999**************************99888889999998886 PP

>> Cauli_AT  Aphid transmission protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.6   2.7e-05     0.029      85     156 ..      46     118 ..      33     126 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 2.7e-05
    Cauli_AT  85 fgsvfkklkkifkeggedkekktklletLkeaqnrikkleeetkklaek.ivtekllkeevkdlderlseird 156
                 +++++k l   f+    ++++  +l +tL+  ++r++kle+ +++l e+ ++t++ l e +    + +s+i++
  EPX72887.1  46 LANLLKALASKFQGESLSQDHMFELKQTLETLSERVHKLEQGQNSLREElMQTQNSLIERLEGQSDLISRIQK 118
                 46788999999999999*******************************9888998888888888888888876 PP

>> XhlA  Haemolysin XhlA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.7   4.3e-05     0.045       8      41 ..      69     102 ..      64     111 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 4.3e-05
        XhlA   8 rietkldnleervdkleekaaeaeekiknleedl 41 
                 ++++ l++l+erv kle+ ++  +e+++++++ l
  EPX72887.1  69 ELKQTLETLSERVHKLEQGQNSLREELMQTQNSL 102
                 67899************************99876 PP

>> HrpB7  Bacterial type III secretion protein (HrpB7)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.5   6.4e-05     0.068      42     109 ..      36     102 ..      18     120 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 6.4e-05
       HrpB7  42 qaqveaardavraheerlddlttgsspfsiadylacrayrdvlegrvraaeaelaaarqaldaaedav 109
                 ++q +  ++++++  ++l++   g s +s + +  ++  ++ l++rv+++e+    +r++l + ++ +
  EPX72887.1  36 KDQFALFEQRLANLLKALASKFQGES-LSQDHMFELKQTLETLSERVHKLEQGQNSLREELMQTQNSL 102
                 67778888999999999999999996.******************************99997665443 PP

>> Fzo_mitofusin  fzo-like conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   3.0   6.7e-05      0.07      58     135 ..      25     110 ..      20     124 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 6.7e-05
  Fzo_mitofusin  58 twtnkakEralKrQfveyatek...Lrli.vsltsancshqvqqelsstfarlcqqvdet...ekeleeeikeleke.iekleevq 135
                    ++tn+  E   K+Qf+ + ++    L++   +++ +++s+    el++t++ l+++v++    +++l+ee+ + +++ ie+le  +
     EPX72887.1  25 RYTNQFEEAIPKDQFALFEQRLanlLKALaSKFQGESLSQDHMFELKQTLETLSERVHKLeqgQNSLREELMQTQNSlIERLEGQS 110
                    69*************98865441114433134566677777777**********99976511167899998777654378887654 PP

>> CorA  CorA-like Mg2+ transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   2.2   7.7e-05     0.082     163     227 ..      57     125 ..      18     130 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 7.7e-05
        CorA 163 l......rralapnrevlkrllakaddkllddedkeylrdlldelerllemlealrerleslqdtysslls 227
                 +      ++++++++++l + l+ ++ ++l++ ++ + ++l++  ++l+e le ++++++++q +y+ + +
  EPX72887.1  57 FqgeslsQDHMFELKQTL-ETLS-ERVHKLEQGQNSLREELMQTQNSLIERLEGQSDLISRIQKNYFKTTN 125
                 2555556899999*****.6666.69999999999999999999999*****************9988765 PP

>> NPV_P10  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.4   9.4e-05     0.099       3      56 ..      64     118 ..      62     134 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 9.4e-05
     NPV_P10   3 qniLlvIradikavddkVdalqqqvddvqenlpdvt.elnekLdaqsaqLaelet 56 
                 q  +   ++  + ++++V  l+q  ++++e+l +++  l e+L++qs+ +  +++
  EPX72887.1  64 QDHMFELKQTLETLSERVHKLEQGQNSLREELMQTQnSLIERLEGQSDLISRIQK 118
                 5556677888999*****************987765279***********99997 PP

>> GIT_CC  GIT coiled-coil Rho guanine nucleotide exchange factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0       1.3   1.3e+03      22      38 ..      36      52 ..      36      64 .. 0.83
   2 ?   11.9   4.9   0.00014      0.15      16      54 ..      65     103 ..      51     112 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 1.3
      GIT_CC 22 KkalaaseakiqqLlkv 38
                K + a  e ++ +Llk+
  EPX72887.1 36 KDQFALFEQRLANLLKA 52
                77888899999999987 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 0.00014
      GIT_CC  16 eeylelKkalaaseakiqqLlkvNtslsdelrlLQskvq 54 
                 +   elK+ l +   ++ +L +  +sl +el + Q+++ 
  EPX72887.1  65 DHMFELKQTLETLSERVHKLEQGQNSLREELMQTQNSLI 103
                 5668*******************************9875 PP

>> CCDC-167  Coiled-coil domain-containing protein 167
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   2.7   0.00026      0.27      17      67 ..      47      97 ..      37     108 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00026
    CCDC-167 17 rerLeaverrlrkeelseeeResleeEeaslkeqleenekeLksLrkeNrk 67
                 + L+a+ ++ ++e+ls+++  +l++ +++l+e++++ e+  +sLr+e  +
  EPX72887.1 47 ANLLKALASKFQGESLSQDHMFELKQTLETLSERVHKLEQGQNSLREELMQ 97
                455888999*************************************99665 PP

>> Csm1_N  Csm1 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   1.1    0.0055       5.8      41      70 .]      65      94 ..      53      94 .. 0.86
   2 ?    4.2   0.1     0.053        56       4      46 ..      95     136 ..      93     141 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0055
      Csm1_N 41 qeiesLkeqlaeleekvkeleerrkkqeEe 70
                + + +Lk++l++l e+v++le+ +++  Ee
  EPX72887.1 65 DHMFELKQTLETLSERVHKLEQGQNSLREE 94
                556689***************999998886 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.053
      Csm1_N   4 LteYKesVqerldsAdllvsklvhENsvLsqkletkdqeiesL 46 
                 L++  +s+ erl+    l+s+ ++ N  ++++ +tkd+e  +L
  EPX72887.1  95 LMQTQNSLIERLEGQSDLISR-IQKNYFKTTNGSTKDTEAIAL 136
                 566678999999999999999.689***********9997766 PP

>> Rsd_AlgQ  Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.2   0.00099         1     107     142 ..      25      60 ..      20      70 .. 0.92
   2 ?    2.6   1.1      0.11   1.2e+02     118     149 ..      85     116 ..      58     117 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00099
    Rsd_AlgQ 107 dfndkyeeaadedeleeldedLsklgeaLeeRfelE 142
                 ++++++eea+ +d+++ ++++L++l +aL+++f+ E
  EPX72887.1  25 RYTNQFEEAIPKDQFALFEQRLANLLKALASKFQGE 60 
                 588999***************************987 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.11
    Rsd_AlgQ 118 edeleeldedLsklgeaLeeRfelEDkLievl 149
                 e+  ++l+e+L + +++L eR+e    Li+++
  EPX72887.1  85 EQGQNSLREELMQTQNSLIERLEGQSDLISRI 116
                 44557788888888888888888888888765 PP

>> Cortex-I_coil  Cortexillin I, coiled coil
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   5.0    0.0021       2.2      11      63 ..      43      99 ..      35     107 .. 0.70
   2 ?    5.5   0.9     0.019        20       4      37 ..      81     114 ..      78     133 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0021
                   XXXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHH.HHHHHHHHHHHH CS
  Cortex-I_coil 11 knelanklaglenslesekvsreelikqkdelesl...lasles.eaaerekrlrel 63
                   ++ lan l +l   +++e +s++++   k+ le l   +  le+ ++  re+ ++  
     EPX72887.1 43 EQRLANLLKALASKFQGESLSQDHMFELKQTLETLserVHKLEQgQNSLREELMQTQ 99
                   5679*********************99998887661114445442555566555544 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.019
                    XXXXXXXXXXHHHHHHHHHHHHHHHHHHHHHHHH CS
  Cortex-I_coil   4 kerleasknelanklaglenslesekvsreelik 37 
                     ++le  +n+l + l   +nsl      + +li 
     EPX72887.1  81 VHKLEQGQNSLREELMQTQNSLIERLEGQSDLIS 114
                    5689*****************9888888888885 PP

>> Prefoldin_2  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1       2.8     3e+03      89     104 ..      43      58 ..      36      60 .. 0.66
   2 ?   12.9   3.5   7.5e-05     0.079      66     105 ..      69     108 ..      64     109 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 2.8
                  HHHHHHHHHHHHCCTS CS
  Prefoldin_2  89 ekeleelkeelqkklq 104
                  e++l++l + l +k+q
   EPX72887.1  43 EQRLANLLKALASKFQ 58 
                  5667777777777776 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 7.5e-05
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTS- CS
  Prefoldin_2  66 eLeerketlekeiktlekqleklekeleelkeelqkklqq 105
                  eL++++etl++++ +le+ + +l++el + +++l ++l++
   EPX72887.1  69 ELKQTLETLSERVHKLEQGQNSLREELMQTQNSLIERLEG 108
                  799*******************************999976 PP

>> Retrotrans_gag  Retrotransposon gag protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   2.6   0.00089      0.94      31      89 ..      48     105 ..      23     110 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00089
  Retrotrans_gag  31 dlkkaflktflpserkdqleeelsslrQgtesvreYvtrfktladqlde..vlteeakiek 89 
                     +l ka+ ++f+    +++++++  +l+Q  e+++e v+++++  + l+e  + t+ ++ie+
      EPX72887.1  48 NLLKALASKFQG---ESLSQDHMFELKQTLETLSERVHKLEQGQNSLREelMQTQNSLIER 105
                     455677777777...9999*****************************9988888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1587  (0.0885158); expected 358.6 (0.02)
Passed bias filter:                      848  (0.0472977); expected 358.6 (0.02)
Passed Vit filter:                       147  (0.00819901); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.50u 0.31s 00:00:00.81 Elapsed: 00:00:00.46
# Mc/sec: 960.47
//
Query:       EPX72888.1  [L=161]
Description: But2 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       396  (0.0220871); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 1175.18
//
Query:       EPX72889.1  [L=762]
Description: anthranilate synthase component II [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.2e-91  305.6   0.5    4.5e-91  304.5   0.5    1.5  1  IGPS           Indole-3-glycerol phosphate synthase
    1.2e-48  165.5   0.1    2.4e-43  148.2   0.0    2.3  2  PRAI           N-(5'phosphoribosyl)anthranilate (PRA) isomera
    8.9e-47  159.3   0.0    1.8e-46  158.3   0.0    1.5  1  GATase         Glutamine amidotransferase class-I
      1e-07   32.0   0.4    7.6e-07   29.1   0.4    2.4  1  Peptidase_C26  Peptidase C26
    0.00044   20.1   1.3       0.17   11.7   0.2    3.4  3  QRPTase_C      Quinolinate phosphoribosyl transferase, C-term
  ------ inclusion threshold ------
      0.077   12.3   0.1       0.21   10.9   0.0    1.7  2  ThiG           Thiazole biosynthesis protein ThiG


Domain annotation for each model (and alignments):
>> IGPS  Indole-3-glycerol phosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  304.5   0.5   1.5e-94   4.5e-91       1     254 []     261     521 ..     261     521 .. 0.96

  Alignments for each domain:
  == domain 1  score: 304.5 bits;  conditional E-value: 1.5e-94
                 HHHCHHHHHHHHHHHHCCS-G..GCCCCG....-SS-SS-HHHHCHCHTTS-EEEEEE-SEETTTEESBSS--HHHHHHHHTTT.-SEEEEE--CCCC- CS
        IGPS   1 lekivaekkeevaeakkrqsl..adleaav..klakpkrsfaeaLresekklaliaEvKkaSPskgliredfdpaeiAkkyeeagAsaiSVLteekyFq 95 
                 l+ki a++ ++va+ k +++   +dl++ +  +l+ p  +f+++L++  +++al+aEvK+aSPskg i+  +++a++A  y++agAs+iSVLte+k+F+
  EPX72889.1 261 LNKIHAQRLIDVAKSKCEKGHsvNDLQTYLkmNLTYPVVNFYDRLKK--STPALMAEVKRASPSKGDIDPYANAAQQALIYANAGASVISVLTEPKWFK 357
                 689**********99987765459999987778999***********..99************************************************ PP

                 --CCHHHHHHHH-SS-EEE.....ES---SHHHHHHHHHCT-SEEEEECCCS-HHHHHHHHHHHCCTT-EEEEEESSHHHHHHHHHTT-SEEEEESEET CS
        IGPS  96 GsledLrevrqavslpvlr.....KdFiideyqieearalgadaiLLivkvledeeleelaeaakslglevLvEvhdeeeleralklgakiiGvNnRnL 189
                 Gsl+dL+ +r+av++ + r     KdFiid+yqi ear+ gad +LLiv++l+ e+le+l++ aksl++e+LvEv+ ++e+e+a+klgak+iGvNnRnL
  EPX72889.1 358 GSLDDLQLARRAVDQVADRpailrKDFIIDPYQIMEARLNGADSVLLIVAMLSYEQLESLYKFAKSLDMEPLVEVNCASEMEIAIKLGAKVIGVNNRNL 456
                 **************9876666666*************************************************************************** PP

                 TTTEE-CHHHHHHCHCC-TTSEEEEESSS-SHHHHHHHCCTT-SEEEESHHHHC-TTHHHHHHHH CS
        IGPS 190 ktlevdlntteeLaklvpkdvllvaeSGiktredveklkeegvnafLvGeslmrqedvekairel 254
                 +++evdl +t++L+++vpkdv+l a+SGi++r dve ++++gv+a+LvGeslmr++d +++ +el
  EPX72889.1 457 HNFEVDLSNTSKLVDMVPKDVVLAALSGISSRSDVELYTKQGVSAVLVGESLMRASDPAAFAQEL 521
                 **********************************************************9998886 PP

>> PRAI  N-(5'phosphoribosyl)anthranilate (PRA) isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   5.4e-06     0.016       1      48 [.     539     586 ..     539     593 .. 0.93
   2 !  148.2   0.0     8e-47   2.4e-43      32     194 .]     602     758 ..     591     758 .. 0.95

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 5.4e-06
                 TCE----SHHHHHHHHHHTSSEEEEE--TTBTTB--HHHHHHHCCCS- CS
        PRAI   1 akicgltrasdvkaavkagadelglifaesskrevseeqaqellekvp 48 
                 +k+cg ++   +k+++++g d +glifa++skr v+ + a+ ++e ++
  EPX72889.1 539 VKVCGTRTVPAAKTIIESGGDLIGLIFADKSKRRVDLQVAKDIVELAH 586
                 699**************************************9998776 PP

  == domain 2  score: 148.2 bits;  conditional E-value: 8e-47
                 TTB--HHHHHHHCCCS--EEEEEESSS-HHHHHHHHHHCTECEEEE-CGG.-HHHHHHHHHHS-TTSEEEEEEE-SSS--S-SSTT-SEEEEE....SS CS
        PRAI  32 krevseeqaqellekvpaklVGVfvNqpieevlriaqelgldvvQLHGdedeqeyeellktelpvikalkvaesvdevkearradhvdllllD....sg 126
                 +++++  q q++ ++ ++ +VGVf+Nqp+e+++++++ ++ld+vQLHG+e + +++e l+   pv k +++++     +  +  +h +l+l+D     +
  EPX72889.1 602 QKDWFGYQFQKIANSRHPLVVGVFKNQPLEYIKEVLSAVDLDIVQLHGQE-PLQWAEELQ--KPVFKVFSPNA----SELSSPNYH-VLPLVDafvgGQ 692
                 6788889999**9999999*******************************.999999999..9**********....788888999.9********999 PP

                 S-SSSXXXXGGGGTTSXX.TTEEEESSXXTTTHHHHHT.TXXSEEEEXGGGEEETEEXHHHHHHHHH. CS
        PRAI 127 aGGtGelldwsliskllkslkviLAGGLtpeNvaeaiklegvlgvDvssGVEtnGvkDlekirkfvqa 194
                  GG G+++dw++ ++++  ++++LAGGLtp+Nv+eai +++++ vDvssGVEt+G++D eki++f+q+
  EPX72889.1 693 SGGLGKTVDWKAAAQIK--IPYVLAGGLTPDNVQEAICTSHAAIVDVSSGVETEGIQDDEKIKRFIQN 758
                 9***************9..8**********************************************96 PP

>> GATase  Glutamine amidotransferase class-I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.3   0.0   5.9e-50   1.8e-46       2     187 ..      28     212 ..      27     214 .. 0.95

  Alignments for each domain:
  == domain 1  score: 158.3 bits;  conditional E-value: 5.9e-50
                 EEESSTSTHHHHHHHHHHTT-EEEEEETTSHHHHHHH.THHSTSEEEEEEESSCTT..TTTHHHHHHHHCTSTS-EEEETHHHHHHHHHTTTEEEEEEC CS
      GATase   2 liDnydsvtenlvhalvelgvkvevvpidasaeeile.llknpdgilvsgGpgspg..vegkieaikearenkiPiLGICLGmQllaiefgrkvvkeke 97 
                 +iDnyds+t+n+v++l +l+ ++ ++ i  + ++ +e ++ +p ++++s+Gpg+p+   + + eai+++++ kiPi+G+C+G+Q+l++++g++v+++  
  EPX72889.1  28 MIDNYDSFTWNIVQYLSNLEKRYPILVIRNDELTVDElEQLKPLKLILSPGPGHPAhdGGICNEAISRFAG-KIPIFGVCMGLQCLFESMGGNVESAG- 124
                 89******************888888888777777666799***************99999**********.**************************. PP

                 EEEEEEEEEEEETTTCGGTTTTSEEEEEEEEEEEEESGCHHHTTEEEEEEEETTEEEEEEEEETTTEEEESSBTTSTTSTTHHHHHHHHH CS
      GATase  98 kehhggtmrlgddetallyglknevierhrHryevnpkelepaglevtakseddeelmeiiekknpfvgvQFHPEststpegpellfnfl 187
                 +  hg+ +++ +d+ +l++g ++ + ++++H+++ +  +++pa+levt+++e++  +m++++kk  + gvQ+HPEs++++ g+e+l+nfl
  EPX72889.1 125 EIIHGKVSKVYHDGLGLFQGIPQGISVTRYHSLAGTI-KSLPADLEVTCWTENG-IIMGARHKKFAIEGVQYHPESILSEYGKEYLQNFL 212
                 9***********************************9.99***********999.8********************************96 PP

>> Peptidase_C26  Peptidase C26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1   0.4   2.6e-10   7.6e-07     103     216 .]      97     197 ..      88     197 .. 0.82

  Alignments for each domain:
  == domain 1  score: 29.1 bits;  conditional E-value: 2.6e-10
  Peptidase_C26 103 ergvPilgiCrGlqllnvalGGtlyqdieeqsgltdhreheqsaashavkvekgsllaellgseeievnslHhqa..ikelaeelrveAvaeDgvi 196
                    + ++Pi+g+C Glq l   +GG++ ++ e       h       +  +v  +  +l++ + +   i+v+ +H+ a  ik l  +l+v+ ++e g+i
     EPX72889.1  97 AGKIPIFGVCMGLQCLFESMGGNVESAGEI----I-H------GKVSKVYHDGLGLFQGIPQ--GISVTRYHSLAgtIKSLPADLEVTCWTENGII 179
                    5689******************98877663....3.2......2234566677788888887..9*******986669*****************9 PP

  Peptidase_C26 197 EaieseeakafvlgvQwHPE 216
                       ++++    + gvQ+HPE
     EPX72889.1 180 MGARHKK--FAIEGVQYHPE 197
                    8777776..6688******9 PP

>> QRPTase_C  Quinolinate phosphoribosyl transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0      0.02        61      84     131 ..       5      55 ..       1      76 [. 0.71
   2 !   11.7   0.2   5.7e-05      0.17      72     157 ..     419     507 ..     395     514 .. 0.73
   3 ?    1.6   0.0     0.072   2.2e+02     114     148 ..     696     730 ..     684     747 .. 0.75

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.02
                 EEEESSHHHHHHHHHHT-S..EEEEES--HHHHHHHHHHHHHHSTT..SEEE CS
   QRPTase_C  84 evevesleeleevleaead..iimLDnfsveelkkaveelkeknkr..vlie 131
                 ev ++   e++ vle e++  i+m+Dn ++ +  ++v++l++ +kr  +l+ 
  EPX72889.1   5 EVPTQEPSETKIVLEGEPErpIVMIDNYDSFTW-NIVQYLSNLEKRypILVI 55 
                 788999999999999885544*******98654.577777777777544444 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 5.7e-05
                 HHHHHHTTTSEEEEEESSHHHHHHHHHHT-SEEEEES--H....HHHHHHHHHHHHHSTTSEEEE.ESS--TTTHHHHHCTT-SEEEECHH CS
   QRPTase_C  72 svreavdkevkievevesleeleevleaeadiimLDnfsv....eelkkaveelkeknkrvliev.SGgvtlenveeyaksgvdvisvgal 157
                 ++ + +d e    vev+   e+e +++ +a +i + n +      +l ++ +++++  k+v++ + SG  +  +ve y k+gv ++ vg  
  EPX72889.1 419 KFAKSLDMEP--LVEVNCASEMEIAIKLGAKVIGVNNRNLhnfeVDLSNTSKLVDMVPKDVVLAAlSGISSRSDVELYTKQGVSAVLVGES 507
                 4555555554..6888888899999999999999999866223334556666666777775555527777889************999965 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.072
                 HHHHHHHHHHHSTTSEEEEESS--TTTHHHHHCTT CS
   QRPTase_C 114 lkkaveelkeknkrvlievSGgvtlenveeyaksg 148
                 l k+v+   ++++++    +Gg+t +nv+e  ++ 
  EPX72889.1 696 LGKTVDWKAAAQIKIPYVLAGGLTPDNVQEAICTS 730
                 6677886777778888899*********9866554 PP

>> ThiG  Thiazole biosynthesis protein ThiG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0     7e-05      0.21     171     221 ..     470     522 ..     416     531 .. 0.65
   2 ?   -3.7   0.0       1.9   5.8e+03      22      41 ..     721     740 ..     710     759 .. 0.64

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 7e-05
                 HHH-SS-..BEEES..---SHHHHHHHHHTT-SEEEESHHHHTSSSHHHHHHHHH CS
        ThiG 171 ieeakvP..vivDA..GigspsdaaqamelGadavllntavaeakdpvamArafk 221
                 ++   vP  v++ A  Gi s sd+    + G++avl+  ++ +a+dp+a A+ + 
  EPX72889.1 470 VDM--VPkdVVLAAlsGISSRSDVELYTKQGVSAVLVGESLMRASDPAAFAQELL 522
                 333..333355554559**********************************9775 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 1.9
                 HHHHHHHHHHT-SEEEEECC CS
        ThiG  22 evlkeaveasgaeivtvalr 41 
                 + ++ea+ +s+a+iv v+  
  EPX72889.1 721 DNVQEAICTSHAAIVDVSSG 740
                 56778888888888888744 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (762 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       482  (0.0268838); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.64u 0.28s 00:00:00.92 Elapsed: 00:00:00.44
# Mc/sec: 5256.49
//
Query:       EPX72890.1  [L=184]
Description: ADP-ribosylation factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.2e-73  244.0   0.1    7.2e-73  243.7   0.1    1.0  1  Arf        ADP-ribosylation factor family
    5.1e-14   52.5   0.0    6.7e-14   52.1   0.0    1.2  1  Roc        Ras of Complex, Roc, domain of DAPkinase
    8.8e-13   48.1   0.7    2.8e-08   33.3   0.1    2.3  2  G-alpha    G-protein alpha subunit
    8.7e-12   44.8   0.0    1.1e-11   44.6   0.0    1.1  1  SRPRB      Signal recognition particle receptor beta subunit
    1.4e-11   44.3   0.0    1.6e-11   44.1   0.0    1.1  1  Ras        Ras family
    2.2e-09   37.1   0.0    2.7e-09   36.7   0.0    1.1  1  Gtr1_RagA  Gtr1/RagA G protein conserved region
    0.00037   20.5   0.0    0.00055   20.0   0.0    1.2  1  MMR_HSR1   50S ribosome-binding GTPase
     0.0009   18.6   0.4      0.011   15.0   0.1    2.0  2  6PF2K      6-phosphofructo-2-kinase


Domain annotation for each model (and alignments):
>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  243.7   0.1   3.2e-76   7.2e-73       4     174 ..      12     180 ..       9     181 .. 0.97

  Alignments for each domain:
  == domain 1  score: 243.7 bits;  conditional E-value: 3.2e-76
                 HHHGGTT.TTEEEEEEEESTTSSHHHHHHHHHHSSCEECSSSSSEEEEEEEETTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHH CS
         Arf   4 ilaklklkkkelrilllGLDnaGKtTilkklkleelvttvPTigfnveeleiknlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeake 102
                  +++++  +ke+ril+lGLD+aGKtTil+klkl++ v t+PT+gfnve++++kn++f+vwDvGGq+k+RplW++Yf+ t+++ifvvD+ad++Rl+ea++
  EPX72890.1  12 PFQRIFV-NKEMRILMLGLDAAGKTTILYKLKLNQSVVTIPTVGFNVETVTYKNIRFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVDAADSNRLAEARQ 109
                 5667777.9****************************************************************************************** PP

                 HHHHHCTSGCCTTSEEEEEEE-TTSTTSS-HHHHHHHTTGGGSSSSSSEEEEEEBTTTTBTHHHHHHHHHHH CS
         Arf 103 eLkalleeeelkevallvlaNKqDlpealseeelrellgleelkgkrkleiqkcsavkgeglkeglewlses 174
                 eL+++++++e++++ llv+aNKqDl +als  +++e+l+l++lk +r +++q ++a++g+gl egl wls++
  EPX72890.1 110 ELHRIISDREMRDALLLVFANKQDLGNALSPLQITEILQLDKLK-DRLWNVQPTCALTGDGLLEGLAWLSQN 180
                 ********************************************.************************997 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.1   0.0     3e-17   6.7e-14       1     119 [.      23     133 ..      23     134 .. 0.76

  Alignments for each domain:
  == domain 1  score: 52.1 bits;  conditional E-value: 3e-17
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEEGHHHHCH.... CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvydsrssenl.... 95 
                 +++++G  ++GKt++l ++  ++    + +t+g ++ t ++            k++++n+WD++Gq+++r l ++y+++ + +i+v+d+ +s++l    
  EPX72890.1  23 RILMLGLDAAGKTTILYKLKLNQS-VVTIPTVGFNVETVTY------------KNIRFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVDAADSNRLaear 108
                 699***************997765.5679*****9966432............5699*******************************77776651111 PP

                 HHHHHHHHHHCSSS-EE.EEEE-TT CS
         Roc  96 keWlkelkkvagkspvi.lvgnkiD 119
                 +e  + ++++  ++ ++ + +nk D
  EPX72890.1 109 QELHRIISDREMRDALLlVFANKQD 133
                 3444444444444444415679998 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.1   1.7e-05     0.039      21      45 ..      19      43 ..      10      47 .. 0.87
   2 !   33.3   0.1   1.2e-11   2.8e-08     186     281 ..      50     134 ..      44     136 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.7e-05
                ..EEEEEEEESTTSSHHHHHHHHHH CS
     G-alpha 21 krevkllllGqseSGKsTilkqlkl 45
                ++e+++l+lG +  GK+Til +lkl
  EPX72890.1 19 NKEMRILMLGLDAAGKTTILYKLKL 43
                358******************9996 PP

  == domain 2  score: 33.3 bits;  conditional E-value: 1.2e-11
                 ----SEEEEEEECT-TEEEEEEEE-SSHHHHHGTCCCTTTECEEEEEEEGGGTT-B-SS-TTSBHHHHHHHHHHCCCC-GGGTTSEEEEEEE-HHH CS
     G-alpha 186 lktvGisetkfevdsklefrivdvgGqrserkkWvpffddvdaiiFlvslsefdqvlyedekvnrleeslklFkeicnnkllkntpiiLflnKlDi 281
                 ++tvG++  ++ ++ +++f+++dvgGq + r+ W ++f++++ +iF+v               nrl e+ +  + i++ ++++++ +++f nK D+
  EPX72890.1  50 IPTVGFNVETVTYK-NIRFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVDA----------ADSNRLAEARQELHRIISDREMRDALLLVFANKQDL 134
                 67999999999998.********************************983..........345999999999999999999999999999999996 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.6   0.0   4.7e-15   1.1e-11       2     137 ..      20     147 ..      19     161 .. 0.86

  Alignments for each domain:
  == domain 1  score: 44.6 bits;  conditional E-value: 4.7e-15
                 ---EEEEE-STTSSHHHHHHHHHHSS---B---S.S-EEETTG...GGTT-SEEEETT-GCCSHHHHHHHHHHGGEEEEEEEEETTS-HHHHHHHHHHH CS
       SRPRB   2 skpavllvGlsdsGKTslftrLttdsvkktvtSq.essaalkvksekgskltliDfPGheklrqklleklkaksslkglvfvvDStidpkevkevAEll 99 
                 ++ ++l++Gl  +GKT+++ +L  ++   t   +  +  +  +   k+ ++++ D+ G++k+r     +  + +  kgl+fvvD+ +d+ ++ e    l
  EPX72890.1  20 KEMRILMLGLDAAGKTTILYKLKLNQSVVTIPTVgFNVETVTY---KNIRFNVWDVGGQDKIRPL-WRH--YFTGTKGLIFVVDA-ADSNRLAEARQEL 111
                 56789******************99999998888677777888...9****************75.555..57889********6.6888899999999 PP

                 HHHHHHHHHHTT---EEEEEE-TTSTT---HHHHHHHH CS
       SRPRB 100 yeilliteklkdavdiliACnKqelflakspklikdaL 137
                   i+++ e ++da+ +l+  nKq+l  a sp  i + L
  EPX72890.1 112 HRIISDRE-MRDAL-LLVFANKQDLGNALSPLQITEIL 147
                 ******99.66665.67777*************99876 PP

>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.1   0.0   7.2e-15   1.6e-11       2     118 ..      24     136 ..      23     162 .. 0.83

  Alignments for each domain:
  == domain 1  score: 44.1 bits;  conditional E-value: 7.2e-15
                 EEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHH.HHHHHHHH CS
         Ras   2 lvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvk.kwveeikr 99 
                 ++++G  a GKt++l++   ++     ++T+g++    ++    k++++++wD  Gq++ + l + y+++++g++ v d  +++ + +++ ++++ i++
  EPX72890.1  24 ILMLGLDAAGKTTILYKLKLNQS-VVTIPTVGFNVE--TV--TYKNIRFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVDAADSNRLAEARqELHRIISD 117
                 899**************988875.5679***77655..44..45789******************************************9455555555 PP

                 HSTTTSEEEEEEETTTGGG CS
         Ras 100 vaeenvpivLvGnKvDlee 118
                    ++  +++ +nK Dl +
  EPX72890.1 118 REMRDALLLVFANKQDLGN 136
                 55588999999******87 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.7   0.0   1.2e-12   2.7e-09       1     123 [.      23     134 ..      23     157 .. 0.84

  Alignments for each domain:
  == domain 1  score: 36.7 bits;  conditional E-value: 1.2e-12
   Gtr1_RagA   1 kvLLmGksgsGKtsmrsiiFdnylardtlrlgatidveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDvesre.leedletl 98 
                 ++L++G   +GKt++   +++ +  ++ +    t+  + ++v +++n+ +n+wD+gGq+++          + f+  + li+V+D+ +++ l e+ ++l
  EPX72890.1  23 RILMLGLDAAGKTTI---LYK-LKLNQSVVTIPTVGFNVETV-TYKNIRFNVWDVGGQDKIRPLW-----RHYFTGTKGLIFVVDAADSNrLAEARQEL 111
                 69***********85...555.555555666689********.79**************987664.....899*************9886699999999 PP

   Gtr1_RagA  99 keilealrqyspeakvfvlihKmDl 123
                 ++i++   +  ++a + v+ +K Dl
  EPX72890.1 112 HRIISD--REMRDALLLVFANKQDL 134
                 999986..55788999999999997 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   2.5e-07   0.00055       1     105 [.      23     120 ..      23     131 .. 0.66

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 2.5e-07
                 EEEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHH.HHHHHHHHHHCTSEEEEEEETT.TTCSHHHHHHH CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseek.glgkaflaleeadlillvvdas.eeklkpldeel 97 
                 +++ +G   +GK+t++ +l  +++ v  +p +  ++++   ++k+ +++++D+ G  +    +   l +++     ++ +++vvda+ ++ l++ ++el
  EPX72890.1  23 RILMLGLDAAGKTTILYKLKLNQS-VVTIPTVGFNVETV--TYKNIRFNVWDVGG-QD----KIrPLWRHYFT--GTKGLIFVVDAAdSNRLAEARQEL 111
                 578899*************66544.44566555555555..555999********.43....22245566664..378*******88755688888888 PP

                 HHHHHH.TT CS
    MMR_HSR1  98 eellee.ak 105
                 ++++++ ++
  EPX72890.1 112 HRIISDrEM 120
                 888755422 PP

>> 6PF2K  6-phosphofructo-2-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.1     5e-06     0.011      10      51 ..      18      59 ..      10      70 .. 0.87
   2 ?    1.9   0.0     0.052   1.2e+02      89     135 ..      83     131 ..      75     137 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 5e-06
                ..S-EEEEEESSTTSSHHHHHHHHHHHHHHTT--EEEEEHHH CS
       6PF2K 10 knsklvivlvGLpargKtyiskkltrylkwlgvrtkvFnvgk 51
                 n+++ i+++GL a gKt+i  kl    + ++++t  Fnv  
  EPX72890.1 18 VNKEMRILMLGLDAAGKTTILYKLKLNQSVVTIPTVGFNVET 59
                567889*******************9999**********975 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.052
                 HHHHHTS--SEEEEES---SH..HHHHHHHHHHHHTT-EEEEEEEE--H CS
       6PF2K  89 laylneeegqvaifDAtNttr..erRklilefveennlkvlflesicsd 135
                 ++y++  +g + + DA  + r  e R+ + +++++++++  +l ++++ 
  EPX72890.1  83 RHYFTGTKGLIFVVDAADSNRlaEARQELHRIISDREMRDALLLVFANK 131
                 589999**********977765589999999999999887666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       463  (0.0258241); expected 358.6 (0.02)
Passed bias filter:                      415  (0.0231469); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1339.77
//
Query:       EPX72891.1  [L=378]
Description: glutathione-dependent formaldehyde dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-28   99.7   0.5    2.3e-28   98.8   0.5    1.5  1  ADH_zinc_N       Zinc-binding dehydrogenase
      1e-24   86.5   0.4      3e-24   85.0   0.4    1.9  1  ADH_N            Alcohol dehydrogenase GroES-like domain
    1.5e-05   24.6   0.3    3.4e-05   23.4   0.3    1.6  1  Glu_dehyd_C      Glucose dehydrogenase C-terminus
    3.2e-05   25.0   0.0    6.5e-05   24.0   0.0    1.6  1  ADH_zinc_N_2     Zinc-binding dehydrogenase
      9e-05   21.9   1.9    0.00016   21.0   1.9    1.4  1  AlaDh_PNT_C      Alanine dehydrogenase/PNT, C-terminal domain
     0.0039   17.5   0.4      0.011   16.0   0.3    1.8  2  Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding doma
     0.0083   15.7   0.1      0.013   15.0   0.1    1.4  1  UDPG_MGDP_dh_N   UDP-glucose/GDP-mannose dehydrogenase family
  ------ inclusion threshold ------
      0.011   15.1   0.2       0.02   14.3   0.2    1.3  1  2-Hacid_dh_C     D-isomer specific 2-hydroxyacid dehydrogenas
      0.031   13.9   0.0      0.062   12.9   0.0    1.4  1  Pep_deformylase  Polypeptide deformylase
      0.068   13.2   0.1       0.15   12.1   0.1    1.5  1  Shikimate_DH     Shikimate / quinate 5-dehydrogenase
       0.16   12.0   2.3        2.8    8.0   1.7    2.3  2  MinC_C           Septum formation inhibitor MinC, C-terminal 


Domain annotation for each model (and alignments):
>> ADH_zinc_N  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.8   0.5   1.4e-31   2.3e-28       2     119 ..     205     325 ..     204     338 .. 0.92

  Alignments for each domain:
  == domain 1  score: 98.8 bits;  conditional E-value: 1.4e-31
                 HHHHHHHHHHHTT-.EEEEEESSHHHHHHHHHTTESEEEETTTC.HHHHHHHHHTTTSSEEEEEESSCSHHHHHHHHHCEEEE.EEEEECSCTSSEEEE CS
  ADH_zinc_N   2 vGlaavqlAkalGa.eviavdsseeklelakklGadevinykea.dlverikeltggegvdvvfecvGsgatleaalkllkpg.GrlvvvGggkgeeef 97 
                 vGlaa+q A a+Ga ++ia+d+++ek ++akk+Ga+e+in+++  d+v++i elt+ +gvd++f+c+G+  ++ +al+++++g G+l v+G+   ++++
  EPX72891.1 205 VGLAAMQGAVASGAsRIIAIDINSEKEAFAKKFGATEFINPTKVdDIVQHITELTD-GGVDYAFDCTGNVNVMLQALQFCHKGwGKLCVIGVAAAGKTL 302
                 9****************************************9999**********5.5**********************************7777779 PP

                 EHHHHH.HTT-EEEEE-SSCHHH CS
  ADH_zinc_N  98 dlrnll.lkeksilGsllgslre 119
                  +r++l  + ++ilGs +g+++ 
  EPX72891.1 303 AFRPFLvVTGRQILGSAFGGVKG 325
                 9999777************9443 PP

>> ADH_N  Alcohol dehydrogenase GroES-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.0   0.4   1.8e-27     3e-24       2      86 ..      35     118 ..      34     161 .. 0.87

  Alignments for each domain:
  == domain 1  score: 85.0 bits;  conditional E-value: 1.8e-27
                 TEEEEEEEEEEE-HHHHHHHTTSTTTTSSSSEE---EEEEEEEEESTT-CS--TT-EEEE-SEEE-SSSHHHHTT-GGG-TTBEE CS
       ADH_N   2 gevlikvkaagiCgsDlhilkggkelevklplilGHEivGeveevgpevkklkvGdrVvvepliscgeCaaCkegeenlCeeakl 86 
                 +ev+++v+++++C++D  +l+g  ++e ++p++lGHE +G+ve++g++v++++ Gd+V++  + +c+eC+ C++g++nlC++ + 
  EPX72891.1  35 HEVRVQVNWTAVCHTDAYTLSG-VDPEGAFPVVLGHEGAGVVESIGEGVTNVRPGDHVILLYTPECKECKFCRSGKTNLCSKIRE 118
                 89********************.8********************************************************55433 PP

>> Glu_dehyd_C  Glucose dehydrogenase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.3   2.1e-08   3.4e-05      32     211 ..     195     374 ..     182     375 .. 0.70

  Alignments for each domain:
  == domain 1  score: 23.4 bits;  conditional E-value: 2.1e-08
  Glu_dehyd_C  32 esalvlGaGslGLLalalleaeerglervyvlgrrdrpdptidlveelGat.Yvdsretpvdeipe.....aseemdlvvEaTGsakhafeaiealap 123
                  +++ v+GaG++GL a+    a  +g +r+  ++ +   + +  + ++ Gat +++   t+vd+i +     ++  +d+ +++TG+ +++++a++    
   EPX72891.1 195 STVAVIGAGCVGLAAMQG--AVASGASRIIAIDIN---SEKEAFAKKFGATeFIN--PTKVDDIVQhitelTDGGVDYAFDCTGNVNVMLQALQFCHK 285
                  6789*********99443..346899999888864...44666789999983443..4566655441111134579*****************98765 PP

  Glu_dehyd_C 124 .nGvaaLlGvpedsevevdggelhrelvleNkalvGsvNanrrhfeaavdtLaa.lpesl.ldelvtkvvdldeleeAfeddd..etiKtvve 211
                    G  + +Gv +      ++ ++   lv++ + ++Gs    ++   +  + ++  l+ ++ +de +t+  +l+ +++Af++ +  + i+ vv+
   EPX72891.1 286 gWGKLCVIGVAAAG----KTLAFRPFLVVTGRQILGSAFGGVKGRTELPNFVDDyLQGHFkVDEYITHSENLHTINNAFDHMHegKCIRCVVD 374
                  2699999***9877....344566778888999999988888766665555554134444789999999999999999986652245777776 PP

>> ADH_zinc_N_2  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.0     4e-08   6.5e-05       2     102 ..     238     369 ..     237     378 .] 0.60

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 4e-08
                   T-SEEEETT.STTHH....HHH-TT-EEEEEES-HHHHH.HHHHHHE.EEEEEEEE--.--.....................S-EEE-CHHHCTTT- CS
  ADH_zinc_N_2   2 GAdevidyr.tedfe....aatggegvDvvldtvggealleaslkvl.pggGrlvsig.gpp....................lsaallkpakkrkgr 71 
                   GA+e+i+ +  +d++    + t  +gvD+++d++g+ + + ++l+++ +g G+l++ig +                      ++ ++  +++  +  
    EPX72891.1 238 GATEFINPTkVDDIVqhitELT-DGGVDYAFDCTGNVNVMLQALQFChKGWGKLCVIGvAAAgktlafrpflvvtgrqilgsAFGGVKGRTELPNFV 333
                   9*****9998888889995555.678*********99999999****8888****999554466666666666555555555222222222223333 PP

                   EEEE--GGG...-.....-HHHHHHHHHHHHHHH.- CS
  ADH_zinc_N_2  72 svkyeflfsmkas....aqadileelaalieeGk.l 102
                     +++  f++ ++    ++ ++++  ++ + eGk +
    EPX72891.1 334 DDYLQGHFKVDEYithsENLHTINNAFDHMHEGKcI 369
                   333333333333333232222255555555555555 PP

>> AlaDh_PNT_C  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   1.9   9.9e-08   0.00016      15      73 ..     183     240 ..     177     260 .. 0.82

  Alignments for each domain:
  == domain 1  score: 21.0 bits;  conditional E-value: 9.9e-08
                  SEEETTCEETCB---EEEEESTSHHHHHHHHHHHHTT-.EEEEEESSHHHHHHHHHTTTC CS
  AlaDh_PNT_C  15 gkgtlaGgvpgvepakvlviGgGvaGlqAiatakglga.kVtvlDvrparleqleslgak 73 
                  g +t  ++v+  + ++v viG+G +Gl+A++ a++ ga ++ ++D+++++    +++ga+
   EPX72891.1 183 GAVTHSAKVE--AGSTVAVIGAGCVGLAAMQGAVASGAsRIIAIDINSEKEAFAKKFGAT 240
                  5567777888..7889*********************945999*******9999999876 PP

>> Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.3   6.9e-06     0.011       1      91 [.     197     285 ..     197     292 .. 0.84
   2 ?   -2.0   0.0       2.5   4.1e+03      17      58 ..     337     377 ..     332     378 .] 0.77

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 6.9e-06
                      EEEE--SHHHHHHHHHHHCTCCT-GEEEEEESSHHHHHHHHCHHTTTCEEEEE--TTTHHHHHHHHHTTS.SEEEE-SSGG.GHHHHHHHHHH CS
  Sacchrp_dh_NADP   1 vliiGaGsvGqavaellarhfdvdaeitvadrskeklealaakalgvrfeaialdaenyeavLaallkeg.dlvvnlsppi.ssldvlkaCie 91 
                      v +iGaG+vG a+++  ++++    +i+ +d + ek ea a+k   ++f++    ++++ +++++l  +g d   ++++++   l+ l++C++
       EPX72891.1 197 VAVIGAGCVGLAAMQGAVASGAS--RIIAIDINSEK-EAFAKKFGATEFIN-PTKVDDIVQHITELTDGGvDYAFDCTGNVnVMLQALQFCHK 285
                      689******************99..***********.66666656666655.5566666666999998889**********88889*****97 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 2.5
                      HHCTCCT-GEEEEEESSHHHHHHHHCHHTTTCEEEEE--TTT CS
  Sacchrp_dh_NADP  17 larhfdvdaeitvadrskeklealaakalgvrfeaialdaen 58 
                      l+ hf+vd e +  + +++  +++++++++ +++   +d +n
       EPX72891.1 337 LQGHFKVD-EYITHSENLHTINNAFDHMHEGKCIRCVVDMSN 377
                      55677775.677778888888999999999999999999887 PP

>> UDPG_MGDP_dh_N  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.1   8.3e-06     0.013       2      35 ..     196     230 ..     195     260 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 8.3e-06
                     EEEEE--STTHHHHHHHHHHCT.SEEEEE-S-HHH CS
  UDPG_MGDP_dh_N   2 kisviGlGYvGlvtaavlaeig.hevigvDideek 35 
                     +++viG+G vGl  +    + g   +i +Di++ek
      EPX72891.1 196 TVAVIGAGCVGLAAMQGAVASGaSRIIAIDINSEK 230
                     69**********998765555549********998 PP

>> 2-Hacid_dh_C  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.2   1.2e-05      0.02      35      91 ..     193     248 ..     181     261 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.2e-05
                   TTSEEEEES-SHHHHHHHHHHHHTT-.EEEEESSSHHHHHCHHHHTCEECSHHHHHHH CS
  2-Hacid_dh_C  35 sgktvGiiGlGrIGqavakrlkafgm.kviaydrskkkeeeeeelgvelvsleellae 91 
                   +g+tv++iG+G +G a+++ + a g+ ++ia+d + +ke+ +++ g   +++ +  + 
    EPX72891.1 193 AGSTVAVIGAGCVGLAAMQGAVASGAsRIIAIDINSEKEAFAKKFG--ATEFINPTKV 248
                   79***********************989*******88776444433..4454444444 PP

>> Pep_deformylase  Polypeptide deformylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   3.8e-05     0.062      42      84 ..     203     248 ..     189     266 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 3.8e-05
                      T-SEEEGGGGT-...-BSEEEEECCSS-ETT....SEEEEEEEEEE CS
  Pep_deformylase  42 kgvgLAApQigv...nkrlfvielpseeeeeeenkeltvliNPkit 84 
                       +vgLAA+Q  v     r+++i+++se+e  ++++  t +iNP  +
       EPX72891.1 203 GCVGLAAMQGAVasgASRIIAIDINSEKEAFAKKFGATEFINPTKV 248
                      69*******98855568****************999*******865 PP

>> Shikimate_DH  Shikimate / quinate 5-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   9.1e-05      0.15      11      75 ..     193     257 ..     185     282 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 9.1e-05
                   TT-EEEEES-SHHHHHHHHHHHCCT-CEEEEEESSHHHHHHHHHHHT.ET.-EEEEGCGHHHHHHT CS
  Shikimate_DH  11 kekkvlliGaGemaelvakhLlakgvkkvvvaNRtlerakelaeelkgee.iealkleelkellae 75 
                   ++++v +iGaG ++  +++  +a+g+ +++ +  + e+ +++a++++++e i+ +k++++ +++ e
    EPX72891.1 193 AGSTVAVIGAGCVGLAAMQGAVASGASRIIAIDINSEK-EAFAKKFGATEfINPTKVDDIVQHITE 257
                   5689**************************99999988.79*****77652688999999999987 PP

>> MinC_C  Septum formation inhibitor MinC, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   1.7    0.0017       2.8      21      71 ..     182     234 ..     178     258 .. 0.83
   2 ?    2.1   0.0      0.12   1.9e+02      16      78 ..     288     351 ..     276     373 .. 0.75

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0017
                 SC-B-TT-EEEESS-EEEEEE.E-SE.EEE-TTS-TT--EEEEEE--SEEEET CS
      MinC_C  21 lgdVnpGAeviAdgniivlGa.lrGr.ahAGakgneearifalklepeqlrIa 71 
                 +g+V + A+v A+  + v+Ga + G  a+ Ga     +ri+a ++++e+ ++a
  EPX72891.1 182 FGAVTHSAKVEAGSTVAVIGAgCVGLaAMQGAVASGASRIIAIDINSEKEAFA 234
                 699****************9767786257899999999****99999876666 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.12
                 SEEEESC-B-TT-EEEESS-EEEEEE.E-SEEEE-TTS-TT--EEEEEE--SEEEETTEEEE-- CS
      MinC_C  16 gdlvvlgdVnpGAeviAdgniivlGa.lrGrahAGakgneearifalklepeqlrIadyiaras 78 
                 g+l v+g   +G ++      +v G+ + G+a+ G+kg++e   f+ +    + ++++yi++++
  EPX72891.1 288 GKLCVIGVAAAGKTLAFRPFLVVTGRqILGSAFGGVKGRTELPNFVDDYLQGHFKVDEYITHSE 351
                 56777777777777777777788885389**********9998888888888888888888443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (378 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       657  (0.0366445); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.39
# Mc/sec: 2888.82
//
Query:       EPX72892.1  [L=87]
Description: acyl-coenzyme A binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.2e-29   99.8   1.0    7.8e-29   99.7   1.0    1.0  1  ACBP      Acyl CoA binding protein


Domain annotation for each model (and alignments):
>> ACBP  Acyl CoA binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.7   1.0   4.4e-33   7.8e-29       4      84 ..       5      81 ..       2      82 .. 0.95

  Alignments for each domain:
  == domain 1  score: 99.7 bits;  conditional E-value: 4.4e-33
                HHHHHHHH.H...HSTS---HHHHHHHHHHHHHHHTSS--S----TTSHHHHHHHHHHHHTTT--HHHHHHHHHHHHHHHH CS
        ACBP  4 FekavaavkklekklkkkpsneeklelYglyKqateGdvntsrPsaldfkgkaKwdaWkalkglskeeAkkkYiellkelv 84
                Feka+a++k+    lk++p+ +e+l+lYgl+Kqat+Gd nt++P++ld+kgk Kw+aW++lkg+ske+A ++Y++ ++el+
  EPX72892.1  5 FEKAAAEIKE----LKQTPNSDELLKLYGLFKQATVGDNNTEKPGLLDMKGKYKWNAWEELKGKSKEDATNEYVAFAEELK 81
                ********55....78889***********************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       418  (0.0233142); expected 358.6 (0.02)
Passed bias filter:                      298  (0.0166211); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.24s 00:00:00.60 Elapsed: 00:00:00.39
# Mc/sec: 673.59
//
Query:       EPX72893.1  [L=743]
Description: golgi transport complex subunit Cog3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-35  122.2   2.2    1.6e-35  122.2   2.2    2.5  2  Sec34       Sec34-like family
  ------ inclusion threshold ------
       0.37   10.9   6.3       0.41   10.7   1.0    2.7  2  TPR_MLP1_2  TPR/MLP1/MLP2-like protein


Domain annotation for each model (and alignments):
>> Sec34  Sec34-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.2   2.2   1.8e-39   1.6e-35       3     148 ..     100     245 ..      98     246 .. 0.98
   2 ?   -2.0   0.3      0.33   2.9e+03      52      52 ..     666     666 ..     642     725 .. 0.55

  Alignments for each domain:
  == domain 1  score: 122.2 bits;  conditional E-value: 1.8e-39
       Sec34   3 dqLeskeeecdelleqtdealeqLeeleekfksvsektsslheaceqlleeqkrleelaeeieekLkyFeeldpitrkLnspgsslvksesFlemLkkl 101
                  +L+++++  d l ++tde++++L++++++f   ++k ++++e+c+ l +e++ +++la++i e L+yF+ l+++ r +++p s+lv+++sF++ + ++
  EPX72893.1 100 RELQAYSAFADGLSQKTDEIKQSLSSIKTSFLVSESKLNEFSETCNALGTEEEAFSRLANDIGEGLSYFAPLKELIRVFRHPPSDLVSRSSFRNYILQI 198
                 68999********************************************************************************************** PP

       Sec34 102 DeclefleehpefkeaetYlirfkqcltrAltliknyvvnslkelte 148
                 ++c++fle++++f+e+e Yl+++k++lt+++t+ kn++++ +k ++e
  EPX72893.1 199 NRCIDFLEKNTDFQESEFYLSQYKRLLTQGFTMFKNHFFRLIKLASE 245
                 ******************************************98876 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.33
       Sec34  52 e 52 
                 +
  EPX72893.1 666 T 666
                 2 PP

>> TPR_MLP1_2  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   1.0   4.6e-05      0.41      31      96 ..      73     139 ..      64     147 .. 0.90
   2 ?    2.1   0.4     0.021   1.9e+02      50      97 ..     692     739 ..     642     743 .] 0.77

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 4.6e-05
  TPR_MLP1_2  31 lekqaeiakeaqqkYerelvkhae.dvkelqalreelnelkaeiaelkaeaesakaeleeseeswee 96 
                 le  ++ +   +q++e+el+k a+  ++elqa+ + ++ l ++  e+k+++ s k+++  se++++e
  EPX72893.1  73 LEDTQKKMDWIEQDFESELLKRADiRIRELQAYSAFADGLSQKTDEIKQSLSSIKTSFLVSESKLNE 139
                 677788888899***********9579***********************************99987 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.021
  TPR_MLP1_2  50 vkhaedvkelqalreelnelkaeiaelkaeaesakaeleeseesweeq 97 
                 ++ aed+++l+++   +++ ++  ++l++ ++     ++++ es+ + 
  EPX72893.1 692 TLSAEDIQALETTELNHETNQNVSKSLEDYLDYIAVPFQRCNESLPND 739
                 5689********999999999999999998888777777777776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (743 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       876  (0.0488594); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.29s 00:00:00.97 Elapsed: 00:00:00.48
# Mc/sec: 4649.04
//
Query:       EPX72894.1  [L=276]
Description: eukaryotic protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.2e-31  107.9  13.6    6.9e-31  107.5  13.6    1.0  1  UPF0121   Uncharacterised protein family (UPF0121)


Domain annotation for each model (and alignments):
>> UPF0121  Uncharacterised protein family (UPF0121)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.5  13.6   3.8e-35   6.9e-31      16     237 ..      20     255 ..      15     258 .. 0.86

  Alignments for each domain:
  == domain 1  score: 107.5 bits;  conditional E-value: 3.8e-35
     UPF0121  16 nkielalwltrlltllftvlyli.plflss.sysaYykallanaatsalrlhqrl.....pqlrlsreylerllledsvhyLlysliFlfsaPvtlall 107
                 + ++++++l +++++lf++ y +  + +++ s+ ++   +  + ++++++l++ +     ++ ++++ +l r++++d+v y++++l  l+ +Pv  al+
  EPX72894.1  20 KNTQFFWFLGQFAVVLFSAIYTLqVVPFRQgSSCIFKTGIAGAVLAYSIVLYKVYgssilSRSSWNTPFLRRIMTDDNVLYFVLALSLLLNRPVLFALT 118
                 6789******************955556654444666667777889*******885544556689999******************************* PP

     UPF0121 108 PvflfallHaasytktlld.......vlgsnsl.vvarll.kvislvesqaeniLrliAlieivlmpllivllllgkaslllpllYyqfLklRYsSrrn 197
                 P++++a++H+++y+++ l        + g++    v +++  + +   +q + +++l+A+ie +l++  ++  +l  +++ + ++Y+ fL++RY+   +
  EPX72894.1 119 PYAIYATFHISTYMRSNLLpaispsvTSGTEPKnYVYKVSqLLNKYTRTQFQPAMKLVANIEAFLLFRYFFGFFLRLNTFSQFIFYAFFLRMRYN--SS 215
                 ***************99999**9997455544346777773345566778888**************************999999**********..89 PP

     UPF0121 198 PytreafseLrvlletlanhpscPavirslieklialvsr 237
                   tr+ f+++ + ++++++  ++P+ +r++  +l + +s+
  EPX72894.1 216 HFTRASFRDIGLRMDRVVADHRVPPQARNAWAQLKHYLSK 255
                 9****************************99988877776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (276 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       442  (0.0246528); expected 358.6 (0.02)
Passed bias filter:                      257  (0.0143343); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 2014.34
//
Query:       EPX72895.1  [L=459]
Description: argininosuccinate lyase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.8e-101  339.0   0.0   5.1e-101  338.2   0.0    1.4  2  Lyase_1   Lyase
      2e-23   82.9   0.0    4.5e-23   81.8   0.0    1.6  1  ASL_C2    Argininosuccinate lyase C-terminal


Domain annotation for each model (and alignments):
>> Lyase_1  Lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  338.2   0.0  5.6e-105  5.1e-101       1     312 []       9     304 ..       9     304 .. 0.99
   2 ?   -3.3   0.0      0.51   4.6e+03     175     223 ..     320     364 ..     318     373 .. 0.61

  Alignments for each domain:
  == domain 1  score: 338.2 bits;  conditional E-value: 5.6e-105
                 CEEEEETCHHHHHHHHHHHHHGGGHHHHHCHHHHHHHHHHHTTSSTHHHHHHHHHHHHHHHCHCHHCGGHHHBSSSSSHHHHHHHHHHHHHHHHTTHSS CS
     Lyase_1   1 grftvkadklmgiftersrenfrlseedikalaalkkaaakanvdlkeeaaaiikaldevleegklddqfvlkviqegsgtavnmnlnevigellgekv 99 
                 grft+++d+lm +++e++ +++r+ ++d+ +++a++ka+++ ++  k e+++ +++l+ v+ee+k+d +f+l +++e+++ta++++l e+ig       
  EPX72895.1   9 GRFTGTTDPLMTAYNESIHYDKRMFNADVDGSKAYAKALEQRGIVNKVELEKLLEGLESVREEWKAD-KFILHPSDEDIHTANERRLGEIIG------T 100
                 89****************************************************************9.************************......6 PP

                 GIIIIITTT--HHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTT-EEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTCEET CS
     Lyase_1 100 epndkvhtgqSsnDqvpTalrlalkkalsekLlpaleqLidalkekakefkdvvkiGrThlqdAtPvtlgqelsayaealerdrerlkellkrllvell 198
                  +++k+htg+S+nDqv+T++rl+l++++ +++ + l +L +++  +a++  d+v++G+Thlq+A+P++++++l+++a  l +d++rl++l++r+++++l
  EPX72895.1 101 GIAGKLHTGRSRNDQVATDMRLWLREQI-KVVKAFLIDLLKVFASRAEADIDIVMPGYTHLQRAQPIRWSHFLMSHAFSLLSDLNRLNQLYTRVNQLPL 198
                 79**************************.889999**************************************************************** PP

                 TTTTTTSSTTTSCCTHHHHHHHHHHHHHCSTEESSSHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTSSEEEEGCCTSSC-TTSTTTEBT CS
     Lyase_1 199 gggtavgtglnadpefaelvakelakvtglpvkapnsfeavsdrDavvellgalkllatsLskfaeDlrllssgeaglvelslaesepGSSiMPgKvNP 297
                 g+g+++g+++ +d+e   +++kel+ ++g   + +ns++av+drD+v+e++ + ++++t++s++aeDl+++ss+e+++v+ls+a+s+ GSSiMP+K+NP
  EPX72895.1 199 GAGALAGNPFAVDRE---FLCKELG-FDG---IIMNSMNAVADRDFVIEFMYWSSMVMTHISRLAEDLIIYSSSEFSFVTLSDAYST-GSSIMPQKKNP 289
                 ***************...*******.***...*******************************************************.*********** PP

                 HHHHHHHHHHHHHHH CS
     Lyase_1 298 vqlElltgvagrvvG 312
                 ++lEll+g++grv+G
  EPX72895.1 290 DSLELLRGKSGRVFG 304
                 **************9 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 0.51
                 HHHHHHHHHHHHHHHHHHHTCEETTTTTTTSSTTTSCCTHHHHHHHHHH CS
     Lyase_1 175 yaealerdrerlkellkrllvellgggtavgtglnadpefaelvakela 223
                 y++ l++d+e l ++  +++   ++  t+v   l ++pe   ++ak l+
  EPX72895.1 320 YNKDLQEDKEALFDSV-KTVSDSVQILTGVLSTLTVNPE---KIAKSLT 364
                 6777777777777777.4444444444666677777776...6666655 PP

>> ASL_C2  Argininosuccinate lyase C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.8   0.0     5e-27   4.5e-23       2      69 .]     367     434 ..     367     434 .. 0.98

  Alignments for each domain:
  == domain 1  score: 81.8 bits;  conditional E-value: 5e-27
                 TTHHHHHHHHHHCTS-HHHHHHHHHHHHHHHHHTT--GGG--HHHHHHH-TT--GGGGGGSSHHHHTT CS
      ASL_C2   2 stATdlADyLvrkGlpFReAHeivgravrlaeekgkeleeltleelkeisplleedveeaLdpeasVa 69 
                 ++ATdlA+yLvrkG+pFR++H+i+g+avr+aee+++++++l+++++k+++pl e+dv++++++e+sV+
  EPX72895.1 367 MLATDLAEYLVRKGVPFRQTHHISGSAVRMAEERNTTIDKLSVDDFKSLNPLYEDDVAKVFNYEESVE 434
                 68****************************************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (459 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       455  (0.0253779); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 3379.71
//
Query:       EPX72896.1  [L=401]
Description: eukaryotic nuclear protein implicated in meiotic chromosome segregation [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.7e-08   32.6   0.7    1.1e-07   31.7   0.7    1.6  1  RED_N         RED-like protein N-terminal region
  ------ inclusion threshold ------
      0.041   13.9   1.3       0.14   12.2   0.0    2.5  3  GvpG          Gas vesicle protein G
      0.069   12.7   0.0       0.31   10.6   0.0    2.2  1  Lsm_interact  Lsm interaction motif


Domain annotation for each model (and alignments):
>> RED_N  RED-like protein N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.7   0.7   1.8e-11   1.1e-07      73     126 ..     112     169 ..      74     231 .. 0.71

  Alignments for each domain:
  == domain 1  score: 31.7 bits;  conditional E-value: 1.8e-11
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXX CS
       RED_N  73 qeskylGGDmehThLvKGLDyaLLqkvrseikkkeeeeeeee....ekelekkaeeek 126
                   ++ lGGD++ ThLv+GLD  LLqk +s+  + +  + +e+     k +e+++++++
  EPX72896.1 112 RRTQELGGDLSTTHLVRGLDRKLLQKAKSQHIEPDIPQFTEKtseeSKPVENEEQDDN 169
                 56788***********************986555444333331111334444443333 PP

>> GvpG  Gas vesicle protein G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   2.4e-05      0.14      19      62 ..      72     118 ..      69     129 .. 0.77
   2 ?   -1.8   0.1      0.55   3.3e+03      55      69 ..     164     178 ..     160     186 .. 0.74
   3 ?   -2.5   0.0      0.92   5.5e+03      22      38 ..     217     233 ..     215     237 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2.4e-05
        GvpG  19 vqeraeeqlddqenlrk..eL.aaLqqeLdaGeIdeeeFdrrEeelL 62 
                 + e+ + + d++e+l    +L  +L  +L +GeI+ +eF rr +el 
  EPX72896.1  72 LTEAGNFDTDEPETLSEsdRLvQDLRSKLHHGEITGDEFSRRTQELG 118
                 556667788888888652255258******************99985 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.55
        GvpG  55 drrEeelLdrLeale 69 
                 +++ ++lL+ L + +
  EPX72896.1 164 EEQDDNLLEELAERT 178
                 678889998887544 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 0.92
        GvpG  22 raeeqlddqenlrkeLa 38 
                 +++ +ld+  n+ k+L 
  EPX72896.1 217 KVKYELDEDGNVLKRLV 233
                 56778999999999996 PP

>> Lsm_interact  Lsm interaction motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   5.3e-05      0.31       5      17 ..       4      16 ..       2      16 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 5.3e-05
  Lsm_interact  5 akPmSNDDFRKMF 17
                  +++m+ DDFRK++
    EPX72896.1  4 STKMNQDDFRKLL 16
                  699999*****98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       895  (0.0499191); expected 358.6 (0.02)
Passed bias filter:                      473  (0.0263818); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.23s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 2797.79
//
Query:       EPX72897.1  [L=207]
Description: ribosomal protein subunit L15 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.3e-18   65.2   0.0    8.2e-18   64.8   0.0    1.1  1  Ribonucleas_3_3  Ribonuclease-III-like


Domain annotation for each model (and alignments):
>> Ribonucleas_3_3  Ribonuclease-III-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.8   0.0   4.6e-22   8.2e-18       3     128 .]      70     198 ..      68     198 .. 0.92

  Alignments for each domain:
  == domain 1  score: 64.8 bits;  conditional E-value: 4.6e-22
  Ribonucleas_3_3   3 elleqaltHkSfangrkghNerLefLGdavLklsvseyllekaekdegeltklraslvseeslaeiAkelgLgkvlrl....rkgeeetegsgr 92 
                      el+eq++tHkS+++g+  +Ne L  LG av+++s++++ l++ + +++ + ++ +++ s +++    k+++ ++ +r      +g+   e+  +
       EPX72897.1  70 ELKEQIFTHKSYKQGSVAYNEPLVSLGVAVVDVSLMNHFLKNGNVSNVPKYSDITKFRSPRRITLATKDWEPESAVRCmlplLNGK-TNEKPPL 162
                      89*********************************************************************999999877754433.4466778 PP

  Ribonucleas_3_3  93 ekvladaleAliGAiyldkgaevaqefveekilkkl 128
                      ++vl++++++l++Aiyl+kg ++a +f+ e+++++l
       EPX72897.1 163 DRVLSTTIFSLVAAIYLQKGGQEALKFCDEHLVNQL 198
                      99****************************999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       514  (0.0286686); expected 358.6 (0.02)
Passed bias filter:                      457  (0.0254894); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1530.14
//
Query:       EPX72898.1  [L=664]
Description: SIN component scaffold protein Sid4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.8e-05   22.6   0.1    0.00018   21.6   0.1    1.4  1  SID       Septation initiation
  ------ inclusion threshold ------
      0.016   15.1   0.3        1.5    8.7   0.0    2.5  2  Wtap      WTAP/Mum2p family
      0.073   13.4   0.2        1.3    9.4   0.0    2.4  2  DUF641    Plant protein of unknown function (DUF641)


Domain annotation for each model (and alignments):
>> SID  Septation initiation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.1     3e-08   0.00018      24     104 ..     566     645 ..     547     658 .. 0.81

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 3e-08
         SID  24 itkelyesLkvdkvdsldlvelqNivKnlillleiPlsklskklpliaiylkyektlllkFanrlhyqlyneeidlkeftk 104
                  +++ly +L +  +d+   +e  N++K +++ l++P++ + + +  +  +l+  +  l +++  +hy l++e+++   ++k
  EPX72898.1 566 KENQLYYRLGLHLIDRQCSIETANMLKSVLIQLDMPYTIFPMAIGQVRRQLQQGRR-LYQWIHVVHYLLFHEKMEEGLVSK 645
                 3567899*********************************************7776.5689***********998655555 PP

>> Wtap  WTAP/Mum2p family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.0   0.00025       1.5      46      75 ..     327     356 ..     259     376 .. 0.86
   2 ?    3.9   0.0    0.0076        46      46      80 ..     438     472 ..     388     494 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00025
        Wtap  46 llDPAvnlvfsrlrkeleeaenkleeaqee 75 
                 +l+PA+n v+++++ ++++ +n++++  ++
  EPX72898.1 327 VLPPALNEVLEKMNTTIQSLTNQCQQRDKQ 356
                 789*********************997765 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.0076
        Wtap  46 llDPAvnlvfsrlrkeleeaenkleeaqeeLqalk 80 
                 ++  A+ l f +lrkel +a+ +++  +++ ++ k
  EPX72898.1 438 TTLDAILLQFDHLRKELSQARHEIQILKQDASQAK 472
                 4445999***************9998888776665 PP

>> DUF641  Plant protein of unknown function (DUF641)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.0   0.00022       1.3      83     122 ..     332     371 ..     315     374 .. 0.87
   2 ?    1.1   0.1     0.077   4.6e+02      76     118 ..     429     471 ..     407     480 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00022
      DUF641  83 qrsllktyeitvkkleaelkakdseieeLkekLeeaeksn 122
                 + ++l+ +++t+++l ++++++d++i+ L+++L  +++++
  EPX72898.1 332 LNEVLEKMNTTIQSLTNQCQQRDKQIDLLNKQLLFNNQQT 371
                 5689999*************************98777665 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.077
      DUF641  76 leaeiqeqrsllktyeitvkkleaelkakdseieeLkekLeea 118
                 +++e++ q   l++     ++l++el++ + ei+ Lk+  ++a
  EPX72898.1 429 VSNEVRVQLTTLDAILLQFDHLRKELSQARHEIQILKQDASQA 471
                 5555555556666666678899999999999*99999876655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (664 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1524  (0.085002); expected 358.6 (0.02)
Passed bias filter:                      668  (0.0372581); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.75u 0.27s 00:00:01.02 Elapsed: 00:00:00.47
# Mc/sec: 4281.35
//
Query:       EPX72899.1  [L=461]
Description: thiamine-repressible acid phosphatase Pho4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-54  184.3   0.0      5e-54  184.1   0.0    1.0  1  His_Phos_2  Histidine phosphatase superfamily (branch 2)


Domain annotation for each model (and alignments):
>> His_Phos_2  Histidine phosphatase superfamily (branch 2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  184.1   0.0   2.8e-58     5e-54       1     383 []      61     403 ..      61     403 .. 0.92

  Alignments for each domain:
  == domain 1  score: 184.1 bits;  conditional E-value: 2.8e-58
                 EEEEEEEEEE--SBB-SHHHHHHHHHHHHHHHH.........HHCHHTGCCGGGGT..........--SSSTTS.....B-HHHHHHHHHHHHHHHHHC CS
  His_Phos_2   1 eLksvvvviRHGdRtPkqkvkksvtspiflsllkkhkeKlkqlktalekkghfpgtyrkv.eveklqlilkwgg....elthaGrkqaeelGrqfrqrY 94 
                 e+++++v+ RHG+R+P+     svt    ls+ +      ++l+++l  ++  pg+  ++ +     +i  ++     +l+++Gr +++e+Gr +  rY
  EPX72899.1  61 EIRQLHVLQRHGSRNPTAGD--SVTNAGYLSQVQ-----DRLLNGSLPINYTVPGNPFQFiK----SWIPVIDTnnadKLSSSGRLELFEMGREILSRY 148
                 79****************99..688888888885.....46899999999999999988653....3333333344447******************** PP

                 HTCCHTTSS--TTEEEEEESSHHHHHHHHHHHHHHCHCCC---S-TTSTTGGG-TTTTCCCEEEHHHHCCCCHHCTTSHHTCHHHCHHHTGGHCHHHHC CS
  His_Phos_2  95 plgLlrlhltykdlkirassegRviaSAaafakGllglegeltdllskdkdllddsnaakdlldeakkklkelltegaeacpafewpikvakrvdelvk 193
                    L+++    ++++i ++ ++Rv++SA ++ +G++g+e               +++ ++++++e ++++++ ++++ +acp f++     +++++  +
  EPX72899.1 149 S-TLFDS----DVYEINTAAQNRVVESATWYSYGMFGEEM--------------KNKSNFIYVPE-DESAGSATLSDFKACPVFNEKRIDHEKTKHIRS 227
                 *.****9....89***********************8888..............88889******.5577777779999*******88888999***** PP

                 HCCCCCHHHHHHHCHHHCTTEEEE-HHHHHHHHHHHHHHHHHHCT-TTGGGCTH..HCHHHHHHHHHHHHHHHC........TTTCCCCHHHHHHHHHH CS
  His_Phos_2 194 ylkedmdeniakrleqlcpgesnllakerwdklercfyeknkfdiskicdlydemkydalhnrylkdleelyklakvipqEygigpeeklkiGllllnp 292
                 ++ +++  +i+ rl+ ++ ++ +l+++++ + + +c++e++ +d s++c l+++  ++ ++++y  dl+  +          g+ +++    G+ ++n+
  EPX72899.1 228 QWEKIFLAPIRTRLNPYFLNY-SLTNDDVRSFFYLCAFEVALKDGSDFCSLFTS--SEIINFEYDYDLKFSFHG--------GPASKWSSIVGGAYVNN 315
                 *****************9998.********************************..******************........***************** PP

                 HHHHHCTSSSEECCSCCCECS-SEEEEEE-HHHHHHHHHHCTTTTTBTTB.SSS......TTT..HCCCS-CT-EEEEEEEEETCTTTEEEEEEEC CS
  His_Phos_2 293 llkkilndlqrtreeatperhvrlrlyfthdshiysllnaLglpeelagedslaa.....ldrlsaspelpymsqivfelyedssekkfyvrllls 383
                 l++++++  ++t+       ++++++ fthd+hi ++ +aLg++ ++++e+ l a     + + ++s+++p+++++++el++++++k +yvr+l++
  EPX72899.1 316 LAESLRSVNNETN-------NQKTFFAFTHDTHIFAVEAALGFFPDITPETPLPAtknpyTYSAKTSSFVPFAGNLITELFQCQDQK-YYVRHLVN 403
                 *************.......9*****************************99999999999999*******************5555.*****997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (461 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       360  (0.0200792); expected 358.6 (0.02)
Passed bias filter:                      302  (0.0168442); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 3213.81
//
Query:       EPX72900.1  [L=483]
Description: U3 snoRNP-associated protein Utp6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.2e-29  100.1   5.2    5.2e-29  100.1   5.2    2.1  2  U3_assoc_6      U3 small nucleolar RNA-associated protein 6
  ------ inclusion threshold ------
      0.083   11.9   0.1       0.15   11.0   0.1    1.4  1  Glyco_hydro_56  Hyaluronidase


Domain annotation for each model (and alignments):
>> U3_assoc_6  U3 small nucleolar RNA-associated protein 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.1   5.2   5.8e-33   5.2e-29       1      83 []       9      91 ..       9      91 .. 0.98
   2 ?   -2.9   0.0       0.8   7.2e+03      46      55 ..     110     119 ..     108     122 .. 0.72

  Alignments for each domain:
  == domain 1  score: 100.1 bits;  conditional E-value: 5.8e-33
  U3_assoc_6  1 LEqmlpeledleekglFtkeEikeIvkkrrkfEyklqrrgkkkedflkYieyElnLeklrkkRrkrlklkkkksksdysivrR 83
                LE+++peledl ek++F++eEi++Ivk rr++E kl rr+ k+ dfl+Yi+yE++Le+lrkkR+krl++k k+++sdy+ vr+
  EPX72900.1  9 LERSVPELEDLLEKKIFNQEEINSIVKSRREYEGKLSRRQVKLTDFLSYIQYEMTLEALRKKRHKRLQIKGKTTVSDYAGVRK 91
                8*****************************************************************************99985 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.8
  U3_assoc_6  46 flkYieyEln 55 
                 +l Yi+y  +
  EPX72900.1 110 WLDYIQYAKS 119
                 5788888665 PP

>> Glyco_hydro_56  Hyaluronidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   1.7e-05      0.15     220     282 ..     225     287 ..     147     295 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 1.7e-05
                     SBB-B---BGGGTTSS-HHHHHHHHHHHHHHHHHHTT-T.T--B--EE-SB-B..S..--B--HH CS
  Glyco_hydro_56 220 alyPsiylekklkssekaakfvrnrvkealrvaklkkkksklpvlvYtrlvyt..dekleflsee 282
                        Psi +e+ l++++++a+ v+++v+ a+  +  ++   + +v  Y+++ yt  +++le+ls++
      EPX72900.1 225 IQLPSISMEEYLANENDTASGVNEKVTSAMNAEVSTN--DAEQVEKYANVLYTiySTALESLSKR 287
                     458***************************9985433..4799*********9766666777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (483 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       935  (0.0521501); expected 358.6 (0.02)
Passed bias filter:                      508  (0.028334); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 3425.68
//
Query:       EPX72901.1  [L=795]
Description: coatomer beta' subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   2.1e-153  511.5   4.3   4.3e-153  510.5   1.7    2.4  3  Coatomer_WDAD  Coatomer WD associated region
    9.2e-40  133.9   8.8    6.4e-07   30.0   0.1    8.4  9  WD40           WD domain, G-beta repeat
    4.2e-07   30.2   0.1        4.1    7.8   0.0    6.2  6  ANAPC4_WD40    Anaphase-promoting complex subunit 4 WD40 doma
  ------ inclusion threshold ------
      0.035   14.0   1.5       0.32   10.9   0.2    2.5  2  Clathrin       Region in Clathrin and VPS
       0.12   12.3   0.3        3.5    7.7   0.0    3.4  4  PQQ            PQQ enzyme repeat
        6.4    7.1   7.8       0.92    9.8   0.5    3.7  5  TPR_2          Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> Coatomer_WDAD  Coatomer WD associated region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.34     1e+03     119     147 ..      28      56 ..       5      60 .. 0.83
   2 ?   -0.2   0.0      0.13   3.8e+02      32     145 ..      97     226 ..      77     235 .. 0.62
   3 !  510.5   1.7  1.4e-156  4.3e-153       2     443 ..     318     760 ..     317     762 .. 0.98

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.34
                    XXXXXXXX.XXXXXXXXXXXXXXXXXXXX CS
  Coatomer_WDAD 119 lLgvksegsvsfYDweqgklvrridvkkv 147
                    +L  + +g v++++ ++++lvr++++++v
     EPX72901.1  28 VLASHYNGQVAIWNYATQSLVRSLEINDV 56 
                    889999999***************99975 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.13
                    XXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXX.......XXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXX...XXXXX CS
  Coatomer_WDAD  32 eiypqslshnpngrfvlVcgdgeyiiyt..alalrnkaygkgldfvwvs.......snrfavlessksvkifknfkekktksikleyq...vdkif 115
                      y+++l+ +p++ fvl c d++ i     + +++  ++ +g+     s        n fa     ++vk+  nf + +  +++l+     v+ + 
     EPX72901.1  97 PDYIRALAVHPTQPFVLSCSDDTTIRAFnwENNWKCVQTFEGHARYVLSlainpkdTNTFASCSLDGTVKV-WNFGSPV-ANFTLQAHdrgVNHVS 190
                    45677888888888888877766554434555555555544433322223354455677888888888888.8887777.5665554311155554 PP

                    X......XXXXXXXXXX.XXXXXXXXXXXXXXXXXX CS
  Coatomer_WDAD 116 g......GalLgvksegsvsfYDweqgklvrridvk 145
                    +       +l    +++ + ++D +++  vr ++ +
     EPX72901.1 191 YypagdkPYLVTSGDDKLIKIWDYQTKACVRVLEGH 226
                    477766556777777777888888888888776655 PP

  == domain 3  score: 510.5 bits;  conditional E-value: 1.4e-156
                    XXXXXXXXXXX.......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXX CS
  Coatomer_WDAD   2 sevrqanikkkee...lkdgellslqlkelgsieiypqslshnpngrfvlVcgdgeyiiytalalrnkaygkgldfvwvs.snrfavlessksvki 93 
                    +ev +a i++ +e   l+dg+++ l++kelg++e yp +l+h+pngrfv Vcg+geyiiytala+rnkaygk+ldf+w++ sn +a + s +sv+i
     EPX72901.1 318 NEVMSAMIRPVKEqveLSDGSSVALSVKELGTTELYPATLKHSPNGRFVSVCGNGEYIIYTALAWRNKAYGKALDFAWGHdSNVYATRVSDRSVEI 413
                    6888888988888888****************************************************************9*************** PP

                    .XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.............. CS
  Coatomer_WDAD  94 fknfkekktksikleyqvdkifgGalLgvksegsvsfYDweqgklvrridvkkvknVvwsddgelvalvskdtvyilsynleavee......edee 183
                    +kn k ++   ++l+y +d ifgG lLgv  +++++fYDwe+  l r+idvk+ +nV+w+++  +v+l++ +++y+l++++e++ +       dee
     EPX72901.1 414 YKNSKRSS--VLDLSYPCDTIFGGFLLGVAGSDFICFYDWETHALARKIDVKP-RNVYWDPEHRYVILACANEMYLLNFKSEVFYDavanniADEE 506
                    ********..*******************************************.*****************************9999********* PP

                    .....XXXXXXX.XXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Coatomer_WDAD 184 egvedafevlhelsesiksgaWvgdvfiYttsnnrlkylvngevgiikhldktlyilgykgkenklylldkdgnvvsleidlselefktavlrkdl 279
                    egv d+fe l + s s+ +g W++d+fiYtt+n rl+ylv+++++ i+++++++y+lgy++++ ++yl d+d+nvvs++ +l  ++++++vl +dl
     EPX72901.1 507 EGVADSFEALADASDSVVNGEWINDTFIYTTNNARLNYLVGDQTYKIANVEHNFYLLGYVARDARIYLTDRDMNVVSYSFNLATVQYQSLVLAGDL 602
                    ************************************************************************************************ PP

                    XXXXXXXXXXXXX.......XXXXXXXXXXXXXXXX-GGGSS-HHHHHHHHHHTT-HHHHHHHHHHH--HHHHHHHHHHHHHTT-HHHHHHHHHHT CS
  Coatomer_WDAD 280 eevlkiiaasnllpeipkeegqkiirfLekkgypelAlqlvqDpetkFdLAlelgnLelAlelakelddeekWkkLgdaAlsqgniklaeeayqka 375
                    e+      a+n+l++ip+  ++++++fL k+gy+e Al+l++D+ ++F+LA+e ++L++A ela+  +d  kW+ LgdaAl+ +++ la+e+++ka
     EPX72901.1 603 EN------ARNMLENIPEADRERLSDFLAKQGYKEAALELSSDNVQRFELAIEAKRLDIAAELARSFNDSLKWRALGDAALNAWDFVLAQECFEKA 692
                    *9......59************************************************************************************** PP

                    T-HHHHHHHHHHHT-HHHHHHHHHHHHHTT-HHHHHHHHHHHT-HHHHHHHHHHTT-HHHHHHHHHHT CS
  Coatomer_WDAD 376 kdfdkLllLylstgnkekLkkLakiaekkgdyniafqaalllgdvekcvdlLiksgrlpeAalfAkty 443
                    +d+ +LllLy+s++n+e+LkkL+k ++++g  n +f +++l+++ ++c+d+L + +r++eA lfA+t 
     EPX72901.1 693 EDYGSLLLLYTSSNNQEGLKKLSKLTSESGISNTSFICSWLTNQPKECLDVLRSNQRYAEANLFASTF 760
                    *****************************************************************985 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   1.3e-06    0.0038       4      38 .]       6      41 ..       3      41 .. 0.89
   2 !   10.7   0.0   0.00027      0.81      11      38 .]      56      83 ..      45      83 .. 0.78
   3 !   21.9   0.0   7.7e-08   0.00023       2      35 ..      88     122 ..      87     125 .. 0.90
   4 !   28.5   0.1   6.5e-10   1.9e-06       1      38 []     130     169 ..     130     169 .. 0.90
   5 !   20.4   0.0   2.3e-07    0.0007       6      38 .]     178     213 ..     171     213 .. 0.82
   6 !   30.0   0.1   2.2e-10   6.4e-07       2      37 ..     218     254 ..     217     255 .. 0.91
   7 ?    1.0   0.0       0.3   8.9e+02      16      31 ..     357     371 ..     339     377 .. 0.85
   8 ?   -2.2   0.0       3.1   9.2e+03      19      37 ..     396     414 ..     389     415 .. 0.56
   9 ?   -3.0   0.0       5.5   1.6e+04      17      26 ..     463     477 ..     447     481 .. 0.62

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 1.3e-06
                EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38
                +r+l  H   v +++f+p  +w+++++++g v iW+
  EPX72901.1  6 QRKLLSHtERVKAIDFHPTEPWVLASHYNGQVAIWN 41
                6777789666*************************8 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00027
                SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38
                 +++++ f   ++w+++GsdD  +r+++
  EPX72901.1 56 VPIRACLFIARKNWFVCGSDDFQLRVYN 83
                347777799999**************97 PP

  == domain 3  score: 21.9 bits;  conditional E-value: 7.7e-08
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvr 35 
                 ++++ +++H + +++la++p +++++s+sdD t+r
  EPX72901.1  88 EKVTQFEAHpDYIRALAVHPTQPFVLSCSDDTTIR 122
                 678899***777**********************9 PP

  == domain 4  score: 28.5 bits;  conditional E-value: 6.5e-10
                 TEEEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 
                 ++c++t++GH   v sla +++d + +as+s Dgtv++W+
  EPX72901.1 130 WKCVQTFEGHaRYVLSLAiNPKDTNTFASCSLDGTVKVWN 169
                 79********555*****88888888*************8 PP

  == domain 5  score: 20.4 bits;  conditional E-value: 2.3e-07
                 EEESS.SSEEEEE..EETTSSEEEEEETTSEEEEEE CS
        WD40   6 tltGH.ssvtsla..fspdgawlasGsdDgtvriWd 38 
                 tl +H  +v++++     d+++l++++dD+ ++iWd
  EPX72901.1 178 TLQAHdRGVNHVSyyPAGDKPYLVTSGDDKLIKIWD 213
                 6779*655*****777777777999999*******9 PP

  == domain 6  score: 30.0 bits;  conditional E-value: 2.2e-10
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                  c+r+l+GH ++v+   f+p  ++++sGs+Dgtv+iW
  EPX72901.1 218 ACVRVLEGHtNNVSFATFHPKFPLIISGSEDGTVKIW 254
                 59*******999*5555******************** PP

  == domain 7  score: 1.0 bits;  conditional E-value: 0.3
                 EEEETTSSEEEEEETT CS
        WD40  16 lafspdgawlasGsdD 31 
                 l+ sp+g++++ ++ +
  EPX72901.1 357 LKHSPNGRFVSVCG-N 371
                 679******98777.4 PP

  == domain 8  score: -2.2 bits;  conditional E-value: 3.1
                 ETTSSEEEEE..ETTSEEEEE CS
        WD40  19 spdgawlasG..sdDgtvriW 37 
                  +d++   +   s D++v i+
  EPX72901.1 396 GHDSNV-YATrvS-DRSVEIY 414
                 444444.222226.8888887 PP

  == domain 9  score: -3.0 bits;  conditional E-value: 5.5
                 E.....EETTSSEEE CS
        WD40  17 a.....fspdgawla 26 
                 +     ++p++++++
  EPX72901.1 463 KprnvyWDPEHRYVI 477
                 344444999999964 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.0    0.0014       4.1      36      81 ..      11      56 ..       1      67 [. 0.85
   2 ?    4.0   0.0      0.02        61      14      76 ..      74     136 ..      67     149 .. 0.64
   3 ?    1.5   0.0      0.12   3.6e+02      24      69 ..     124     172 ..     104     194 .. 0.67
   4 ?    3.1   0.0      0.04   1.2e+02      29      81 ..     167     228 ..     162     236 .. 0.79
   5 ?    4.2   0.0     0.018        53      36      87 ..     225     275 ..     210     280 .. 0.81
   6 ?    3.2   0.0     0.037   1.1e+02      36      75 ..     385     424 ..     366     454 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0014
  ANAPC4_WD40 36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81
                 ++ ++v+++ ++p +     ++ +g+v + +  ++ +v+sl++++ 
   EPX72901.1 11 SHTERVKAIDFHPTEPWVLASHYNGQVAIWNYATQSLVRSLEINDV 56
                 47899***********************************998876 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.02
  ANAPC4_WD40  14 tedgellvfRln.gqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesg.kvvhsl 76 
                  ++d +l+v+  n g++v ++  +++   +r+La +p   +     +d+++r ++ e+  k+v+++
   EPX72901.1  74 SDDFQLRVYNYNtGEKVTQF--EAHPDYIRALAVHPTQPFVLSCSDDTTIRAFNWENNwKCVQTF 136
                  45556666666524666666..5666677777777777777777777777777776543566555 PP

  == domain 3  score: 1.5 bits;  conditional E-value: 0.12
  ANAPC4_WD40  24 lngqrvwtl..eedkedsevrsLaWkpdg.klLavaysdgevrlldaes 69 
                  +n+++ w+   + +++ + v sLa +p++ + +a    dg+v++ +  s
   EPX72901.1 124 FNWENNWKCvqTFEGHARYVLSLAINPKDtNTFASCSLDGTVKVWNFGS 172
                  4666666664444777888999999987625677777799998877655 PP

  == domain 4  score: 3.1 bits;  conditional E-value: 0.04
  ANAPC4_WD40  29 vwtl.......eedkedsevrsLaWkpdgk..lLavaysdgevrlldaesgkvvhslsvkse 81 
                  vw++       + +++d+ v+++++ p g    L+ + +d  +++ d +++ +v+ l+ +++
   EPX72901.1 167 VWNFgspvanfTLQAHDRGVNHVSYYPAGDkpYLVTSGDDKLIKIWDYQTKACVRVLEGHTN 228
                  555555555557789999*******99886448999999**************999987776 PP

  == domain 5  score: 4.2 bits;  conditional E-value: 0.018
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtcl 87 
                  ++ ++v+   ++p+  l+  + +dg+v++ +  s  +++s++ + ++   c+
   EPX72901.1 225 GHTNNVSFATFHPKFPLIISGSEDGTVKIWHTLSYSLIKSYNFSLDR-AWCI 275
                  46677788889999999*****************9999999887763.5555 PP

  == domain 6  score: 3.2 bits;  conditional E-value: 0.037
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhs 75 
                  k  ++  ++aW +d ++ a  +sd +v++++ ++   v  
   EPX72901.1 385 KAYGKALDFAWGHDSNVYATRVSDRSVEIYKNSKRSSVLD 424
                  5556777899********************9888776655 PP

>> Clathrin  Region in Clathrin and VPS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.2   0.00011      0.32      53     136 ..     591     677 ..     560     684 .. 0.81
   2 ?    1.2   0.1     0.099     3e+02      76     100 ..     684     709 ..     681     721 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00011
                 HHT......T-HHHHHHTTSS---S-TTHHHHHHHT-SSHHHHHHHHHT.TXTHSSHSSXSSSSHCSCHHHHTTTTTXXSHHHHHHHHHHH CS
    Clathrin  53 aky......ddpqeleeflkknnnydlekvaklcekadlyeeavilykk.inefkkaisllkklkdfddaieyaakvsnpelweklleall 136
                 ++y      +d+++++++l++  + d+e++ +++ k+++ e a++l ++ +++f+ ai+ +   k +d a+e a+  +++  w  l +a l
  EPX72901.1 591 VQYqslvlaGDLENARNMLENIPEADRERLSDFLAKQGYKEAALELSSDnVQRFELAIE-A---KRLDIAAELARSFNDSLKWRALGDAAL 677
                 4555555557789*********************************9988899999888.4...457888888888888888888877765 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.099
                 HHHHH.HT-SSHHHHHHHHHTTXTHS CS
    Clathrin  76 vaklc.ekadlyeeavilykkinefk 100
                 +a+ c eka+ y  +++ly+  n+ +
  EPX72901.1 684 LAQECfEKAEDYGSLLLLYTSSNNQE 709
                 789999999***********998865 PP

>> PQQ  PQQ enzyme repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.0    0.0012       3.5       4      28 ..      71      95 ..      70      98 .. 0.88
   2 ?   -0.9   0.0      0.64   1.9e+03       5      16 ..     114     125 ..     112     131 .. 0.84
   3 ?   -2.1   0.0       1.5   4.5e+03      22      32 ..     210     220 ..     210     223 .. 0.83
   4 ?   -2.5   0.1         2     6e+03      18      24 ..     308     314 ..     306     314 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0012
                EEEETTSEEEEEETTTCCEEEEEES CS
         PQQ  4 ylgsadGylyAlDadTGkvlWrfkt 28
                ++gs+d +l+ ++ +TG+++ +f++
  EPX72901.1 71 VCGSDDFQLRVYNYNTGEKVTQFEA 95
                3559999****************86 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.64
                 EEETTSEEEEEE CS
         PQQ   5 lgsadGylyAlD 16 
                  +s+d++++A++
  EPX72901.1 114 SCSDDTTIRAFN 125
                 479*******99 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 1.5
                 EEEEEESSSCG CS
         PQQ  22 vlWrfktggpv 32 
                 ++W ++t++ v
  EPX72901.1 210 KIWDYQTKACV 220
                 59*****9877 PP

  == domain 4  score: -2.5 bits;  conditional E-value: 2
                 TTCCEEE CS
         PQQ  18 dTGkvlW 24 
                 ++Gk++W
  EPX72901.1 308 TSGKIVW 314
                 46***** PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       5.2   1.6e+04      19      33 ..      94     108 ..      94     108 .. 0.83
   2 ?   -3.2   0.0       4.4   1.3e+04       2      14 ..     252     264 ..     251     267 .. 0.81
   3 ?   -1.7   0.2       1.5   4.5e+03       7      22 ..     620     635 ..     618     636 .. 0.81
   4 ?    9.8   0.5   0.00031      0.92       4      27 ..     669     692 ..     666     695 .. 0.94
   5 ?   -3.9   0.0         6   1.8e+04      11      20 ..     744     753 ..     743     753 .. 0.80

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 5.2
       TPR_2  19 eAleafekAleldPn 33 
                 eA+ ++ +Al+  P+
  EPX72901.1  94 EAHPDYIRALAVHPT 108
                 788899999998885 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 4.4
       TPR_2   2 ealynlGlayykl 14 
                 ++++ l ++++k+
  EPX72901.1 252 KIWHTLSYSLIKS 264
                 689*****99987 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 1.5
       TPR_2   7 lGlayyklgdyeeAle 22 
                 l + ++k+g  e Ale
  EPX72901.1 620 LSDFLAKQGYKEAALE 635
                 6777899999999998 PP

  == domain 4  score: 9.8 bits;  conditional E-value: 0.00031
       TPR_2   4 lynlGlayyklgdyeeAleafekA 27 
                 + +lG+a++++ d+  A e+fekA
  EPX72901.1 669 WRALGDAALNAWDFVLAQECFEKA 692
                 99*********************9 PP

  == domain 5  score: -3.9 bits;  conditional E-value: 6
       TPR_2  11 yyklgdyeeA 20 
                 ++ +++y+eA
  EPX72901.1 744 LRSNQRYAEA 753
                 567899*999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (795 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       578  (0.0322383); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.68u 0.28s 00:00:00.96 Elapsed: 00:00:00.44
# Mc/sec: 5401.94
//
Query:       EPX72902.1  [L=474]
Description: Las1-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-39  136.1   0.2    4.7e-39  133.9   0.0    2.2  2  Las1      Las1-like
  ------ inclusion threshold ------
      0.059   13.4   0.0       0.15   12.0   0.0    1.7  1  DUF1804   Protein of unknown function (DUF1804)


Domain annotation for each model (and alignments):
>> Las1  Las1-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.9   0.0   5.3e-43   4.7e-39       1     152 [.       6     148 ..       6     149 .. 0.94
   2 ?   -0.7   0.1      0.15   1.4e+03      45      45 ..     270     270 ..     165     372 .. 0.62

  Alignments for each domain:
  == domain 1  score: 133.9 bits;  conditional E-value: 5.3e-43
        Las1   1 tpWrdrrellevreqlyaess...seeeerkralarvsawrsrgneklphavestalLleailsdeekklsasssssalraaysaalvRfvnglldsaq 96 
                 +pWr+++e+l +++ +y+e +    + ++  r+++ v+ w++rg+  +ph ve+ta+L+  +l+ + +++          ++ s++++Rfv+glld++q
  EPX72902.1   6 VPWRSKEEFLFLMSCFYNEGQeeiPDPSALFRGIEIVQSWSTRGR--IPHSVEATAQLVLSLLNGDPSQK----------LSLSLSISRFVSGLLDPIQ 92 
                 7****************85443457889999************99..****************9988875..........8899*************** PP

        Las1  97 kkqraasvaavakelglpatlVelRHeatHeelpslaeLreaakkaLewlwenYWk 152
                 ++q+a+++a +ak+++lp+ +Ve+RH++tHeelpsl +Lr++a +aL+wl+++YW 
  EPX72902.1  93 QSQYAVPMAILAKSIDLPTSFVEIRHAITHEELPSLPVLRQTAYRALAWLYDHYWI 148
                 *******************************************************5 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.15
        Las1  45 l 45 
                  
  EPX72902.1 270 F 270
                 2 PP

>> DUF1804  Protein of unknown function (DUF1804)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   1.7e-05      0.15      88     163 ..     320     393 ..     303     394 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1.7e-05
     DUF1804  88 entelsaedkveiLasLsdsfsktvaaakrldPelsklavalevlellaefvrekfpehaealleiLepfgeelak 163
                 +n+  + +++ ++   L+  +  +++aa + +P ++  ++ +  l  ++e+  ++++ ++ a+++ L p+ +el++
  EPX72902.1 320 SNE--DIKERNSAYMYLTKWYIYLTKAAYKSEPWANSVSITQTELASILELCIQRSDPFTRAVVDELSPLDKELEE 393
                 333..67888888899**********************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (474 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       788  (0.0439511); expected 358.6 (0.02)
Passed bias filter:                      524  (0.0292264); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 3232.01
//
Query:       EPX72903.1  [L=127]
Description: 60S ribosomal protein L32 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.5e-49  164.7   0.7    8.7e-49  164.4   0.7    1.0  1  Ribosomal_L32e  Ribosomal protein L32
  ------ inclusion threshold ------
       0.17   12.1   0.0       0.27   11.5   0.0    1.4  1  fn1             Fibronectin type I domain


Domain annotation for each model (and alignments):
>> Ribosomal_L32e  Ribosomal protein L32
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.4   0.7   9.7e-53   8.7e-49       1     108 []      11     118 ..      11     118 .. 0.99

  Alignments for each domain:
  == domain 1  score: 164.4 bits;  conditional E-value: 9.7e-53
                     ------TTTTT-TTS-SS------TT-TTTTT-TTS-----GGG---TTTTT--TTS-EEEEESSGGGGTT--TTTE..EEEE-TTS-HHHHHHH CS
  Ribosomal_L32e   1 tkkFirhqsdryvklkeswrkprGidnrvrrrfkgqilmpkiGYgspkktrgllpsGfkkvlVhnvkeLevllmenksyaaeiahsVsskkrkei 95 
                     tk F+rhqsdr+++++eswrkprGidn vrrrfkg i+mpkiGYg++kktr+++p+G+k +lV+nv+++e llm+nk+yaaeia++Vs++kr ei
      EPX72903.1  11 TKPFRRHQSDRFHRVGESWRKPRGIDNCVRRRFKGVIRMPKIGYGNNKKTRYCMPNGLKAFLVRNVADVELLLMHNKTYAAEIASNVSARKRVEI 105
                     689******************************************************************************************** PP

                     HHHHHHTT-EBSS CS
  Ribosomal_L32e  96 verAaelgikVtN 108
                     ve+A+ lg+kVtN
      EPX72903.1 106 VEKARALGVKVTN 118
                     ************9 PP

>> fn1  Fibronectin type I domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0     3e-05      0.27       5      19 ..      18      32 ..      15      39 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 3e-05
         fn1  5 qtgrfYqvgetWerp 19
                q  rf++vge+W +p
  EPX72903.1 18 QSDRFHRVGESWRKP 32
                6789**********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       551  (0.0307323); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.34s 00:00:00.86 Elapsed: 00:00:00.53
# Mc/sec: 719.46
//
Query:       EPX72904.1  [L=345]
Description: chromodomain protein 2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.8e-15   56.7   0.2    5.4e-14   52.0   0.1    2.3  2  Chromo_shadow   Chromo shadow domain
      1e-13   50.9   2.3      1e-13   50.9   2.3    2.2  2  Chromo          Chromo (CHRromatin Organisation MOdifier) dom
  ------ inclusion threshold ------
       0.03   15.1   1.5       0.03   15.1   1.5    3.5  4  PHC2_SAM_assoc  Unstructured region on Polyhomeotic-like prot
      0.093   12.0   0.1       0.14   11.4   0.1    1.2  1  MFP2b           Cytosolic motility protein


Domain annotation for each model (and alignments):
>> Chromo_shadow  Chromo shadow domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0     0.035   1.6e+02       5      27 ..     137     165 ..     133     168 .. 0.76
   2 !   52.0   0.1   1.2e-17   5.4e-14       1      53 []     286     342 ..     286     342 .. 0.98

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.035
                    TEEEE.EE....TS.-EEEEEEETTS-EE CS
  Chromo_shadow   5 iigav.dt....sg.elmflikWkngeka 27 
                    i++av d     +g    +++kW++ + +
     EPX72904.1 137 IVEAVlDArlkeNGtGYQYYLKWEGYDDP 165
                    677776667777888999*****997765 PP

  == domain 2  score: 52.0 bits;  conditional E-value: 1.2e-17
                    TTTTTEEEEEE.....TS-EEEEEEETTS-EEE.EEHHHHHHHSHHHHHHHHHCT-XX CS
  Chromo_shadow   1 epekiigavdt.....sgelmflikWkngekaelvpskeanqkcPqkvikFYEerltw 53 
                    ++e++++ v+t     sg++++ ++Wk+g+k+  +++ +++qkcP  +i+FYE++l++
     EPX72904.1 286 SWEDLVDRVETvqklkSGKIIVQLQWKDGQKSA-HDNVIIHQKCPLHIIRFYEDHLNF 342
                    7********************************.**********************97 PP

>> Chromo  Chromo (CHRromatin Organisation MOdifier) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.9   2.3   2.3e-17     1e-13       1      54 []     136     189 ..     136     189 .. 0.94
   2 ?   -1.4   0.1      0.51   2.3e+03       3      16 ..     291     304 ..     284     314 .. 0.66

  Alignments for each domain:
  == domain 1  score: 50.9 bits;  conditional E-value: 2.3e-17
                 EEEEEEEEEEEETTEECEEEEEEETTSTG.GGTEEEEGGGCSSHSHHHHHHHHHH CS
      Chromo   1 yeVerIidhrtdkdgleleYlVKWkglpy.sentWEpeenlekcfqelideFkkr 54 
                 y+Ve ++d r +++g +++Y+ KW+g+++ ++ntW +ee++  c qel+ eF+++
  EPX72904.1 136 YIVEAVLDARLKENGTGYQYYLKWEGYDDpEDNTWNEEEDCVGC-QELVNEFWRK 189
                 89*********999999************6667***********.*******985 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.51
                 EEEEEEEEEETTEE CS
      Chromo   3 VerIidhrtdkdgl 16 
                 V+r+  +++ k+g+
  EPX72904.1 291 VDRVETVQKLKSGK 304
                 66666666666665 PP

>> PHC2_SAM_assoc  Unstructured region on Polyhomeotic-like protein 1 and 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   1.4    0.0091        41      68      92 ..      18      45 ..       2      70 .. 0.74
   2 ?   -1.2   1.4      0.79   3.6e+03      57      77 ..      73      89 ..      54     112 .. 0.53
   3 ?   -2.7   4.6       2.3     1e+04      46      79 ..     100     135 ..      75     140 .. 0.55
   4 ?   15.1   1.5   6.6e-06      0.03       2      91 ..     177     265 ..     176     289 .. 0.75

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.0091
  PHC2_SAM_assoc 68 SsrcsDnSSy...eEplsplSasssssr 92
                     s +sD SS    +E  +plS ss    
      EPX72904.1 18 ESASSDKSSKalnDEVHNPLSFSSTEED 45
                    4678999998888**********98764 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.79
  PHC2_SAM_assoc 57 skllsqksqeeSsrcsDnSSy 77
                    s+      ++eS+++sD    
      EPX72904.1 73 SSFD----RKESTESSDSDAL 89
                    2222....3444444443333 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 2.3
  PHC2_SAM_assoc  46 qpqqsqpl.svsskll.sqksqeeSsrcsDnSSyeE 79 
                      ++qs p+ + +s+ l  ++  e  s++sD S  eE
      EPX72904.1 100 ETEQSEPAlKPNSPSLpLSNYEESGSEGSDGSGEEE 135
                     344444433334433303334444578888777666 PP

  == domain 4  score: 15.1 bits;  conditional E-value: 6.6e-06
  PHC2_SAM_assoc   2 VgCtkrvglfkpdkskevkeaaakhaRRrgkkrssselskeakkq.pqqsqplsvsskllsqksqeeSsrcsDnSSyeEplsplSasssss 91 
                     VgC + v  f ++k  +   +  + +RR+++  s+s+   e kk     + p+s  s++ + ks   S + + nS  +  lspl  s ss+
      EPX72904.1 177 VGCQELVNEFWRKKGGKPPINMLRTKRRKARSTSQSRKLLE-KKTdDDLKPPISTFSRKRR-KSATKSKNLEENSDVDPSLSPLLRSESSA 265
                     89999999998888877775556555666666666666666.6662555556676666655.9*********************9998876 PP

>> MFP2b  Cytosolic motility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   3.2e-05      0.14      78     150 ..     147     220 ..     135     255 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 3.2e-05
       MFP2b  78 dekklg..fwyeWikykdrke.kieekrelvrCgdslpvlwkekdegallGyvdtktevakfsydgkseklsgkkl 150
                 +e+ +g  ++ +W  y d ++ + +e+ + v C++ +  +w++k++++ + ++ tk+  a+ +  ++s+kl  kk+
  EPX72904.1 147 KENGTGyqYYLKWEGYDDPEDnTWNEEEDCVGCQELVNEFWRKKGGKPPINMLRTKRRKARST--SQSRKLLEKKT 220
                 455555115669******9997889999*****************************999977..34444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (345 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       760  (0.0423894); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.47
# Mc/sec: 2210.48
//
Query:       EPX72905.1  [L=785]
Description: O-mannosyltransferase Ogm4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-88  296.6  22.5    1.4e-88  296.6  22.5    1.6  2  PMT       Dolichyl-phosphate-mannose-protein mannosyltransfer
    3.1e-55  186.9   9.0    3.1e-55  186.9   9.0    3.0  2  PMT_4TMC  C-terminal four TMM region of protein-O-mannosyltra
    8.8e-14   51.8   0.0    1.5e-13   51.0   0.0    1.3  1  MIR       MIR domain


Domain annotation for each model (and alignments):
>> PMT  Dolichyl-phosphate-mannose-protein mannosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  296.6  22.5   2.3e-92   1.4e-88       3     244 ..      75     319 ..      73     320 .. 0.97
   2 ?   -3.7   0.5       1.2   7.1e+03     214     240 ..     651     681 ..     621     683 .. 0.57

  Alignments for each domain:
  == domain 1  score: 296.6 bits;  conditional E-value: 2.3e-92
         PMT   3 ltllallirlwrlslpnsvvfdevhfgkfasdYlehsffmdvhpplgkmllalggyLagkdgnftfesigaeyypenvpyvslRlfsallgslivplvy 101
                 + ++++l+r+w+l +pn+vvfdevhfgkfas+Y+++++f+d hpp++k+lla++++Lag+dg++ f++ig++y+  +vpyv++R+++all+sl++plv+
  EPX72905.1  75 IVIVSFLTRFWKLHVPNEVVFDEVHFGKFASYYIQGKYFFDLHPPFAKLLLAFVAWLAGYDGHYLFDNIGDNYKDYGVPYVAIRAWPALLSSLVPPLVF 173
                 5689*********************************************************************************************** PP

         PMT 102 ltllelgfskltallaallvllenslitlsryilldspLlfftllsmyclvkfe..rkapfsrswwlwllltgvalglavsvKwvglftvllvgllliw 198
                 lt++e+g++ +++l++a lvl++n++++++r+illd++L+f++++++yc+v+f+  r++pfsr+ww wl+ltgv+l++++s+K+vglft+  +gl ++ 
  EPX72905.1 174 LTMKESGYELWACLVSACLVLFDNAHVAEGRLILLDATLVFSMVAAVYCYVRFFklRHSPFSRGWWSWLFLTGVCLSCTISTKYVGLFTFCSIGLSVCL 272
                 *************************************************************************************************** PP

         PMT 199 elwqllg.dkslllksivkhllaralaliviPvtlylavftvhfwll 244
                 elw+l+  +  l++++   h+lar+++liv+P++lyl++f++hf ll
  EPX72905.1 273 ELWYLWDiKTGLPIQRFASHFLARFFCLIVFPFALYLFWFFLHFRLL 319
                 *******5666778888***************************987 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 1.2
         PMT 214 i....vkhllaralaliviPvtlylavftvh 240
                       + ++  + ++  iP++l   + ++h
  EPX72905.1 651 NhfyrSIMFFYATYMFHYIPFYLMGRQLFLH 681
                 2444444455555666777887777775555 PP

>> PMT_4TMC  C-terminal four TMM region of protein-O-mannosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   7.0      0.18   1.1e+03     124     180 ..     256     317 ..     237     336 .. 0.76
   2 !  186.9   9.0   5.2e-59   3.1e-55       1     199 []     558     779 ..     558     779 .. 0.93

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.18
    PMT_4TMC 124 hYlpAllfailllaalldfllkslkkslkkk.........klvklivvvvllvlviavFiffsplt 180
                  Y++ + f ++ l+++l+ ++  l++ +  +         + ++++++++++ ++++ F+ff+ + 
  EPX72905.1 256 KYVGLFTFCSIGLSVCLELWY--LWDIK--TglpiqrfasHFLARFFCLIVFPFALYLFWFFLHFR 317
                 688888999999999999997..33222..134778999888899999999999999999998774 PP

  == domain 2  score: 186.9 bits;  conditional E-value: 5.2e-59
    PMT_4TMC   1 FlkkflelqkamltsnnalteshpyaSepyeWplllrgisywtkneekkqiyllGNpvlwwlstiallvfvllllalllrrqrgvkdl.eeeetrllns 98 
                 F+kk++elq +m+++nn lteshpy+S+p +W +l++gi++w knee+kqiyllGNp++wwl   ++++ +++  +++l +qrg+ +l ++ ++++++s
  EPX72905.1 558 FFKKYIELQLVMFRQNNLLTESHPYSSTPSDWFTLHHGIAFWAKNEENKQIYLLGNPIGWWLIGGIVITTTVVASVEMLLHQRGIVTLlPSVRNHFYRS 656
                 9**************************************************************999999999999************96666677**** PP

    PMT_4TMC  99 glflllgwalhylPfflmgRvlflhhYlpAllfailllaalldfllkslkkslkkk......................klvklivvvvllvlviavFif 175
                 ++f+   +++hy+Pf+lmgR+lflhhYlpA ++ ++l++a+++  + ++  +l+ +                       +++ ++ ++l++++ ++F+f
  EPX72905.1 657 IMFFYATYMFHYIPFYLMGRQLFLHHYLPAQVAGAMLCGAFIQLACIKSF-KLPVSpgvkqptdvdsngyaksirrkgYICHALLSLALTAVLGYCFVF 754
                 *******************************************9983333.3334479****************99977777888888999999***** PP

    PMT_4TMC 176 fspltyGlpgts.eevkklkwlssW 199
                 f+p+tyG   +s  e+ ++kwl+sW
  EPX72905.1 755 FAPMTYGDVSLSvPEWLRRKWLESW 779
                 ********99999************ PP

>> MIR  MIR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.0   0.0   2.6e-17   1.5e-13      11     174 ..     365     523 ..     356     527 .. 0.87

  Alignments for each domain:
  == domain 1  score: 51.0 bits;  conditional E-value: 2.6e-17
         MIR  11 LfHshqdeyltiseqqqkqevflritlypsadaanssraLWeievvqkd...aw.rgglikwgkvyRlkHlaTgryLaseeekksplseseddqkevsa 105
                 + Hsh d+y+    + + ++  +++t yp +d++n+    W i +  +    ++     +k+ + ++l+H+ T   L  ++   sp + ++++ ++vs+
  EPX72905.1 365 FLHSHLDKYPIPYDDGRISSGGQQVTGYPFEDDNNY----WMILPHDHYddpKYkPNMPVKNTDYIKLHHVGTNTDLITHDV-ASPYNPTNEEFTTVSV 458
                 57********88888888888889************....****999966665534556888888*****************.*******999999999 PP

         MIR 106 yglegfegdnDkveifekksttgmksaklv.prdsyvrlqHvvtgcwLhstsvklkkekfekvqqkvica 174
                 ++  +    + + ++f++  +   + ++ v ++   ++l+H  t+ +++s   +l++++f+  qq++  a
  EPX72905.1 459 DESAAE---KHELTLFQLVISDEDSHDRQVfTKAMSFKLIHKLTNVAMWSDPKPLPDWGFN--QQEINGA 523
                 999666...5569999998777777777666******************************..9998655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (785 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       849  (0.0473534); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.70u 0.32s 00:00:01.02 Elapsed: 00:00:00.47
# Mc/sec: 4970.51
//
Query:       EPX72906.1  [L=214]
Description: ubiquinol-cytochrome-c reductase complex subunit 8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-21   76.5  10.6    1.4e-21   76.5  10.6    2.2  2  UCR_hinge   Ubiquinol-cytochrome C reductase hinge protein
  ------ inclusion threshold ------
        2.2    7.8  25.8          3    7.4  25.8    1.1  1  DUF4045     Domain of unknown function (DUF4045)
        2.8    6.7  16.1        3.5    6.4  16.1    1.0  1  DUF4551     Protein of unknown function (DUF4551)


Domain annotation for each model (and alignments):
>> UCR_hinge  Ubiquinol-cytochrome C reductase hinge protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.4      0.41   2.5e+03      21      39 ..      73      91 ..      58     102 .. 0.70
   2 !   76.5  10.6   2.3e-25   1.4e-21       1      65 [.     148     213 ..     148     213 .. 0.97

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.41
   UCR_hinge 21 khyeeCveRVksrseaete 39
                   +e +e+V s  ++++e
  EPX72906.1 73 TSVDESKEKVASSDDDQKE 91
                5567778888887773332 PP

  == domain 2  score: 76.5 bits;  conditional E-value: 2.3e-25
   UCR_hinge   1 DpkeklreeCeekekCkklkkhyeeCveRVksrse.aeteedCveelfdlvhcvdhCvapklfkkL 65 
                 Dp+++  eeC+e+++C+++k+h++eC++RV+++ e  +++edC+ee+f+l+hc+ +C+ p++fk+L
  EPX72906.1 148 DPLDTKIEECKEAPQCHEAKHHFDECTARVTEKLEnGDKSEDCLEEFFHLYHCARDCADPQIFKQL 213
                 99*****************************99888999*************************98 PP

>> DUF4045  Domain of unknown function (DUF4045)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4  25.8    0.0005         3     190     306 ..      21     161 ..      12     193 .. 0.51

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0005
     DUF4045 190 asvDlgrpssfkevspvglkrsea.pgshskkssvsgas.aeaskakeeas........eeaekestekeespapasseeskese.keeekeseeekap 277
                 +  D+ ++++f+e+ p +    ++ p+   ++++ s+ + +e  k k++++        e+  +++++++e+p+++ +ee+k+se   +e++++++ +p
  EPX72906.1  21 EASDIPNRKEFNEQVPSKKDPDTQnPEDSPMETTKSTVArEENLKLKDQEQltsvdeskEKVASSDDDQKEEPKETPQEEQKPSEeAPQETAETSQPQP 119
                 567888888888888776665555233333333333332233334444444445544433455566666677776666666666623333444455566 PP

     DUF4045 278 skkaeaseekkeeeeesepeeeee.............rkeap 306
                 ++ ++++e+++e +ee+e eeeee              keap
  EPX72906.1 120 EEGEQEQEQPEEGQEEEEEEEEEEeelvdpldtkieeCKEAP 161
                 665555555555544444444444333333333333222222 PP

>> DUF4551  Protein of unknown function (DUF4551)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4  16.1   0.00058       3.5     116     270 ..      29     199 ..      13     205 .. 0.47

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.00058
     DUF4551 116 selfkvspskasekksrressgaa.kkssslnessldakekeektvskksqlslsl..selrklsee.e.keelesekalkslrsasrplPesllsrap 209
                 +e  +  psk+   +++ e s ++ +ks+  +e++l+ k++e+ t +++s+ ++++   ++++  +e   +e+++se+a +++  +s p+Pe+   ++ 
  EPX72906.1  29 KEFNEQVPSKKDPDTQNPEDSPMEtTKSTVAREENLKLKDQEQLTSVDESKEKVASsdDDQKEEPKEtPqEEQKPSEEAPQETAETSQPQPEEGEQEQE 127
                 333333333333333333333333355666666666777777777777776666553344444443313133444555555588888899988744444 PP

     DUF4551 210 kpp.......sspkeppssslskderdskseess..............qvelrlgsvlsrlllrsla.tssaeekeaelhlYi 270
                 +p+       +   e +++++  d                        +++ ++   + r   +  +  +s++  e+  hlY 
  EPX72906.1 128 QPEegqeeeeE---EEEEEEELVDP--------LdtkieeckeapqchEAKHHFDECTARVTEKLENgDKSEDCLEEFFHLYH 199
                 33333332221...11111111222........12223333355555555555555555555543333455555566778885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2122  (0.118356); expected 358.6 (0.02)
Passed bias filter:                      595  (0.0331865); expected 358.6 (0.02)
Passed Vit filter:                       179  (0.00998383); expected 17.9 (0.001)
Passed Fwd filter:                        70  (0.00390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.06u 0.36s 00:00:01.42 Elapsed: 00:00:00.52
# Mc/sec: 1242.21
//
Query:       EPX72907.1  [L=449]
Description: 19S proteasome regulatory subunit Rpt1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.9e-40  137.7   0.0      5e-40  137.0   0.0    1.4  1  AAA              ATPase family associated with various cellul
    4.8e-07   29.5   0.0    1.4e-06   28.0   0.0    1.7  1  AAA_lid_3        AAA+ lid domain
    4.8e-05   23.4   0.0    0.00017   21.6   0.0    1.9  1  AAA_5            AAA domain (dynein-related subfamily)
     0.0001   22.6   0.0     0.0039   17.5   0.0    2.4  1  AAA_22           AAA domain
    0.00023   21.3   0.0    0.00072   19.7   0.0    1.8  2  AAA_2            AAA domain (Cdc48 subfamily)
    0.00034   21.1   0.1     0.0059   17.0   0.0    2.2  2  AAA_16           AAA ATPase domain
     0.0019   17.4   0.0     0.0031   16.7   0.0    1.3  1  DUF815           Protein of unknown function (DUF815)
     0.0031   17.3   0.0     0.0066   16.2   0.0    1.5  1  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
     0.0082   15.7   0.0       0.02   14.4   0.0    1.6  1  AAA_7            P-loop containing dynein motor region
  ------ inclusion threshold ------
      0.012   15.8   0.0      0.023   14.9   0.0    1.5  1  AAA_33           AAA domain
      0.014   15.7   0.0      0.025   14.8   0.0    1.4  1  AAA_28           AAA domain
      0.025   15.0   0.0      0.067   13.6   0.0    1.7  1  RNA_helicase     RNA helicase
      0.044   13.5   0.0       0.11   12.2   0.0    1.8  2  AAA_24           AAA domain
      0.068   13.0   0.0       0.13   12.1   0.0    1.5  1  AAA_3            ATPase family associated with various cellul
      0.073   13.6   0.0       0.17   12.5   0.0    1.7  1  AAA_18           AAA domain
      0.077   12.4   0.0       0.16   11.3   0.0    1.4  1  Mg_chelatase     Magnesium chelatase, subunit ChlI
      0.092   12.8   0.0       0.22   11.5   0.0    1.6  1  AAA_14           AAA domain
       0.13   12.0   0.0       0.32   10.7   0.0    1.6  1  Sigma54_activat  Sigma-54 interaction domain
       0.14   11.9   0.0       0.24   11.1   0.0    1.3  1  IstB_IS21        IstB-like ATP binding protein
       0.15   11.9   0.0        7.2    6.4   0.0    2.3  2  ATPase_2         ATPase domain predominantly from Archaea


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.0   0.0   5.5e-43     5e-40       1     131 [.     227     359 ..     227     360 .. 0.95

  Alignments for each domain:
  == domain 1  score: 137.0 bits;  conditional E-value: 5.5e-43
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHH...TTCCCHHHHHHHHHHHHHHHHT CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr...sgseseeeervvnqLlteldgv 96 
                 v+lyGppGtGKTl+a+ava+ ++++f+++ gsel++kyvge+++ +relf+ a++k+  +i+f+DEida++++r     + ++e +r++ +L+t+ldg+
  EPX72907.1 227 VMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK-ACIIFFDEIDAIGGARfddGAGGDNEVQRTMLELITQLDGF 324
                 79*****************************************************98.9***************9965668899999************ PP

                 TTSSSTEEEEEEESSGGGSTHHHHS.TTSSEEEETT CS
         AAA  97 kkkeskvivigatnrpdkldpallr.gRfdrkieie 131
                 + + +++ v+ atnrp++ld+al+r gR+drk+e++
  EPX72907.1 325 DPR-GNIKVLFATNRPNTLDEALMRpGRIDRKVEFG 359
                 **7.66***************************997 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   0.0   1.5e-09   1.4e-06       3      44 ..     384     425 ..     382     426 .. 0.91

  Alignments for each domain:
  == domain 1  score: 28.0 bits;  conditional E-value: 1.5e-09
   AAA_lid_3   3 dlkeLAerTeGySGADlaalcreAallAlrrgikeitmedfe 44 
                  ++ +A++++  +GA+l ++c eA++ A+r  +   t++df 
  EPX72907.1 384 RWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVATEKDFL 425
                 56779*****************************99999996 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   1.9e-07   0.00017       1      77 [.     226     295 ..     226     302 .. 0.78

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 1.9e-07
                 EEEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------..G-SEEEEESGGG- CS
       AAA_5   1 dvlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar..egeilvlDEvera 77 
                 +v+L GppGtgK+  a+ +a ++ +++  v +++      l++++   +g +     +l + ar  +++i+++DE++ +
  EPX72907.1 226 GVMLYGPPGTGKTLCARAVANRTDATFIRVIGSE------LVQKYVG-EGARMV--RELFEMARtkKACIIFFDEIDAI 295
                 59**********************9999999876......8888883.333333..44444444459*********965 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   4.4e-06    0.0039       8      41 ..     227     251 ..     222     340 .. 0.89

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 4.4e-06
      AAA_22   8 lvvtGesGtGKTtllrrlleqldeeakaeeerpe 41 
                 ++++G++GtGKT+++r ++++ d         ++
  EPX72907.1 227 VMLYGPPGTGKTLCARAVANRTD---------AT 251
                 589*****************984.........33 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       5.6     5e+03      26      49 ..      97     120 ..      83     148 .. 0.67
   2 !   19.7   0.0     8e-07   0.00072       6     103 ..     227     318 ..     222     330 .. 0.76

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 5.6
                 HTT-....-EEEEEGGG------- CS
       AAA_2  26 llfvkkekkliradaselleeeev 49 
                  +++++e++l +a +++++e+e++
  EPX72907.1  97 RQRMSEEQPLQVARCTKIIENEQS 120
                 455567777777777777774432 PP

  == domain 2  score: 19.7 bits;  conditional E-value: 8e-07
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG---..----THHHHHHHHHTTT-HHHHTTSEEEEETGGG-------------HHHHHHHHHH CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselle..eeevehlvsrligappgyvgaeegGivllDEidKihpkessgadvSregVqrdLLqi 102
                 ++l gp g+Gkt+ a+a+a+  ++    ++ir+  sel +    e +++v +l      + + ++  i+++DEid i   +        ++Vqr +L +
  EPX72907.1 227 VMLYGPPGTGKTLCARAVANRTDA----TFIRVIGSELVQkyVGEGARMVREL----FEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLEL 317
                 6889******************96....9***999999992222333333333....3455666778**********99633344445579*****998 PP

                 H CS
       AAA_2 103 l 103
                 +
  EPX72907.1 318 I 318
                 7 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   6.6e-06    0.0059       8      51 ..     198     251 ..     194     271 .. 0.71
   2 ?    1.3   0.0      0.43   3.8e+02     124     146 ..     273     299 ..     267     321 .. 0.75

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 6.6e-06
      AAA_16   8 eleqLlsale.rvrsgrp.........elvllsGesGvGKsslvrellralekd 51 
                 ++e+L++++e ++ s++            v+l+G++G+GK+  +r+++++  ++
  EPX72907.1 198 QIERLREVVElPLLSPERfiklgidppKGVMLYGPPGTGKTLCARAVANRTDAT 251
                 55555555555555554455555555699******************9754443 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.43
      AAA_16 124 krllallsrderplvlvlDdlq.....w 146
                 ++l++ +++ ++  ++++D+++     +
  EPX72907.1 273 RELFEMART-KKACIIFFDEIDaiggaR 299
                 556677777.777********9555544 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   3.4e-06    0.0031      52     116 ..     223     292 ..     176     297 .. 0.83

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 3.4e-06
      DUF815  52 pannvLLwGarGtGKSslvkallneyaeegLrli..evekedlkelpklvellr...erperfilfvDDL 116
                 p + v+L+G  GtGK  + +a+ n++ ++ +r+i  e+ ++ + e  ++v++l    ++++ +i+f D +
  EPX72907.1 223 PPKGVMLYGPPGTGKTLCARAVANRTDATFIRVIgsELVQKYVGEGARMVRELFemaRTKKACIIFFDEI 292
                 66789*****************************88888999999888888765232678899***9975 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   7.4e-06    0.0066      35      94 ..     226     293 ..     218     298 .. 0.67

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 7.4e-06
      RuvB_N  35 hvllyGpPGlGkttlakiiakelgvkl.kitsgPvleka.gdlaalltnl......eekdvlfideih 94 
                  v+lyGpPG Gkt  a+ +a+  ++++ ++  +  ++k  g+ a ++ +l      ++  ++f dei 
  EPX72907.1 226 GVMLYGPPGTGKTLCARAVANRTDATFiRVIGSELVQKYvGEGARMVRELfemartKKACIIFFDEID 293
                 59********************9988515555555555325555554444222222344577888775 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   2.3e-05      0.02      25      69 ..     216     252 ..     211     296 .. 0.70

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 2.3e-05
       AAA_7  25 llelllknkkpvllvGptGtGKtviikdllkkldkekylsltinf 69 
                 +++l ++  k v+l+Gp GtGKt++++ + ++ d         +f
  EPX72907.1 216 FIKLGIDPPKGVMLYGPPGTGKTLCARAVANRTDA--------TF 252
                 56677777899*****************9999982........33 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.0   2.5e-05     0.023       2      39 ..     227     266 ..     227     288 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 2.5e-05
      AAA_33   2 vllvGlpGsGKstlaerllkklg..avllssdtlrrrlfg 39 
                 v+l G+pG+GK+  a+ ++++++  ++++   +l ++++g
  EPX72907.1 227 VMLYGPPGTGKTLCARAVANRTDatFIRVIGSELVQKYVG 266
                 799****************999966666666666666555 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   2.8e-05     0.025       2      40 ..     227     270 ..     226     290 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 2.8e-05
      AAA_28   2 ivitGgestGKTtlleaLaar....gypvv.pEaareileekla 40 
                 +++ G+++tGKT  ++a a+r     ++v+  E + +++ e+++
  EPX72907.1 227 VMLYGPPGTGKTLCARAVANRtdatFIRVIgSELVQKYVGEGAR 270
                 6899***************8876556777777777777766553 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   7.5e-05     0.067       1      62 [.     227     279 ..     227     296 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 7.5e-05
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkklklkkkdsvysrnpeddfwdgYtgqevvvidDfgqvk 62 
                   ++lyGp+g+GK+++a+ +          +++d +++r   ++ +++Y g+ + ++ ++ ++ 
    EPX72907.1 227 VMLYGPPGTGKTLCARAV---------ANRTDATFIRVIGSELVQKYVGEGARMVRELFEMA 279
                   689**************3.........45567777778888888888877777777766655 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   0.00012      0.11       5      22 ..     227     244 ..     224     322 .. 0.89
   2 ?   -3.4   0.0       7.2   6.5e+03      31      63 ..     405     435 ..     403     440 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00012
      AAA_24   5 iliyGpsgiGKTtlakel 22 
                 +++yGp+g+GKT +a+  
  EPX72907.1 227 VMLYGPPGTGKTLCARAV 244
                 89***********99987 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 7.2
      AAA_24  31 tekGlksldadkfpdieswedfldevvelaael 63 
                 te+G+ ++ a++  ++ + +dfld v+++ + +
  EPX72907.1 405 TEAGMFAIRARR--RVATEKDFLDSVQKVVKGN 435
                 788888888888..6678888888888775555 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00015      0.13       2      30 ..     227     255 ..     226     288 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00015
       AAA_3   2 vllegvPGlaktllvkalakaldlefkri 30 
                 v+l g PG++ktl ++a+a+  d++f r+
  EPX72907.1 227 VMLYGPPGTGKTLCARAVANRTDATFIRV 255
                 78999*********************998 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   0.00018      0.17       1      25 [.     227     258 ..     227     323 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00018
      AAA_18   1 IlltGtpGvGKttlakeLskrl.gf......g 25 
                 ++l G+pG+GKt  a+++++r+ +       +
  EPX72907.1 227 VMLYGPPGTGKTLCARAVANRTdATfirvigS 258
                 789***************99984335655542 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00018      0.16      25      42 ..     227     244 ..     214     250 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00018
  Mg_chelatase  25 lllvGppGsGKtmlakrl 42 
                   ++l+GppG+GKt+ a+++
    EPX72907.1 227 VMLYGPPGTGKTLCARAV 244
                   89*************987 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00025      0.22       5      76 ..     227     295 ..     224     322 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00025
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelileklkeekktylflDEiqev 76 
                 +++ G+  +GKT  ++ ++++       ++ +   +  +k   + +++ ++++e+++++k  ++f+DEi  +
  EPX72907.1 227 VMLYGPPGTGKTLCARAVANRTD---ATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAI 295
                 7899**********999996666...5555555444444444444467778888765668888******887 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00036      0.32      22      53 ..     224     252 ..     212     266 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00036
                      SS-EEEECSTTSSHHHHHHHHHHHSTTTTS-E CS
  Sigma54_activat  22 dlsvlitGesGtGKellaraiheaskrkekpf 53 
                      +  v++ G  GtGK+l+ara+ +++   ++ f
       EPX72907.1 224 PKGVMLYGPPGTGKTLCARAVANRT---DATF 252
                      5679***************997644...4445 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00027      0.24      47      70 ..     224     247 ..     217     276 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00027
   IstB_IS21  47 kenivllGpsGvGKshlaialgve 70 
                  ++++l Gp+G+GK+  a a++ +
  EPX72907.1 224 PKGVMLYGPPGTGKTLCARAVANR 247
                 57899*************999876 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0     0.008       7.2      23      46 ..     227     250 ..     218     268 .. 0.79
   2 ?    2.9   0.0     0.096        86     112     136 ..     277     301 ..     259     324 .. 0.77

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.008
    ATPase_2  23 yfiYGpegsGKtaLlkeiienled 46 
                 +++YGp g GKt   + ++++ + 
  EPX72907.1 227 VMLYGPPGTGKTLCARAVANRTDA 250
                 789*********988888887744 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.096
    ATPase_2 112 kikkkgkkiiiiiDelqklidlgln 136
                 ++ +++k  ii++De+  ++   ++
  EPX72907.1 277 EMARTKKACIIFFDEIDAIGGARFD 301
                 67788899********999965555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (449 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       442  (0.0246528); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        79  (0.00440627); expected 17.9 (0.001)
Passed Fwd filter:                        20  (0.00111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              20  [number of targets reported over threshold]
# CPU time: 0.59u 0.29s 00:00:00.87 Elapsed: 00:00:00.48
# Mc/sec: 2815.08
//
Query:       EPX72908.1  [L=1490]
Description: sorting receptor for vacuolar protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   2.7e-224  745.0   1.6   5.7e-134  447.3   2.3    2.3  2  Sortilin-Vps10  Sortilin, neurotensin receptor 3,
    8.4e-58  195.5  17.0      1e-34  120.3   0.9    2.5  2  Sortilin_C      Sortilin, neurotensin receptor 3, C-terminal
    3.5e-12   44.4  47.8        1.9    8.8   0.1   13.1 13  BNR             BNR/Asp-box repeat
    7.7e-08   32.0   0.2       0.56    9.5   0.0    5.7  6  BNR_2           BNR repeat-like domain
     0.0031   17.4   5.8        7.6    6.9   0.8    6.0  5  BNR_6           BNR-Asp box repeat
     0.0071   15.6   0.9         16    4.7   0.0    4.1  5  PSII_BNR        Photosynthesis system II assembly factor YCF4
  ------ inclusion threshold ------
      0.017   15.1   4.7        1.6    8.8   0.0    5.4  7  CHB_HEX_C       Chitobiase/beta-hexosaminidase C-terminal dom
       0.14   12.2   0.0       0.37   10.8   0.0    1.6  1  DUF1422         Protein of unknown function (DUF1422)
       0.19   12.2  10.0        1.5    9.4   1.8    2.7  2  preSET_CXC      CXC domain
       0.29   11.3  13.4        4.2    7.5   0.1    6.7  7  F5_F8_type_C    F5/8 type C domain
        1.2    8.3   5.2       0.45    9.7   0.2    2.6  3  Ion_trans       Ion transport protein


Domain annotation for each model (and alignments):
>> Sortilin-Vps10  Sortilin, neurotensin receptor 3,
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  294.7   0.0   6.7e-91   1.1e-87       2     444 ..      92     543 ..      91     545 .. 0.92
   2 !  447.3   2.3  3.5e-137  5.7e-134       3     445 ..     759    1198 ..     757    1199 .. 0.94

  Alignments for each domain:
  == domain 1  score: 294.7 bits;  conditional E-value: 6.7e-91
                     EEEEESSTTSS-EE-GGGGTTEEBE-EEE-STTS--EEEEEES-EEEEESSTTSSEEEEE-SS-BS...S--EEESSETTEEEEE.......... CS
  Sortilin-Vps10   2 evyiSeDeGktwkkvkeklkgeaiqeivvhpfdkkkaylltdskklyvttDrGktwkkfklpfkpslsaeplsfhakdkdwlialgek......k 90 
                     ++y+S+D+G++w++ +   ++  i+++++h++ ++++++ltd + +y++ D+G++w+ f l+++ + s+ p++fha+++d++i++++       +
      EPX72908.1  92 DLYLSKDNGENWQNGDVPDQNCHIKSLFQHTYASSRVFALTDCNYVYYSYDNGDSWNYFLLEHQVNPSQIPFHFHATNPDYVIFNNMYcsssnsW 186
                     69*************9777777889************************************************************9888888877 PP

                     ...BTTS-EEEESSTTSS.EEEEESSEEEEEE-S.........TT-EEEEE-SSS-TTTTTTSEEEEEESSTTSS-EEEE.......EEEEEEEE CS
  Sortilin-Vps10  91 eskdckkkayystdggks.wkklqesvkkcewakss....kkkeekilceekeeeseseekkklrlvssddffkskkelk......segvvsfav 174
                      ++ c+  +yy++dg++s  +     ++ c ++ s+     +++++i+c +++ ++ s++  + rl+s+dd+f+s   +       s+gv ++ +
      EPX72908.1 187 VGRVCRPDIYYTNDGFNSgANPAPVGISYCIFSLSTelmeVASNDQIICISENPQKASRPPFNKRLISTDDWFNSLVPIRlhhllgSDGVYGVLT 281
                     88889999**********9999**********88778888999*************9******************96555667889********* PP

                     ETTEEEEEEE-TTSS-EEEEEESSTSS-EE-.SSS.-B-TT--EEEEEEESSEEEEEEE-SS.STSEEEEEEE-TTSSCEEEEEEEEB-TTTS-B CS
  Sortilin-Vps10 175 vkeflvvavkseetselalyvSldgkkfaea.efpskkleekaytvlessehsiflavttss.dkelgsllkSnsnGtsfvlslenvnrneegyv 267
                     +++f+++a  +  t +l +yvS+dg +++e  +f  k  e +a+t+l s++++++++  +s+ ++++g l++ +     fvl ++ +nr  +gyv
      EPX72908.1 282 TGSFIITALLDAATGKLFVYVSQDGINWQETlKFH-KGFEFDAFTILPSTDYALVVDNLDSHpNNPTGVLYTLDFDSSTFVLRMSGTNRYLDGYV 375
                     ****************************9853888.999******************976661567***************************** PP

                     --EEETTSTTEEEEEEE-T..........TS-EEEEEESSTTS-EEEEE--TTSSSTTT-SSSSB-EEEEE-HHHHHTT-S-SS--B--TTSTT- CS
  Sortilin-Vps10 268 dfekvegleGvilanvvknaeev..kkgakkklktkItfddGrtWellkppdkdkygcsskklekcsLhLhsyteelerknvgrkvfSspsApGl 360
                     df++v++++G + +n v+n +ev  +  a+k l+t +t++ G++W++l++p++     + +++e csL+L +        + ++k+  sp ApG+
      EPX72908.1 376 DFTQVNSVDGLMFVNAVDNLKEVdsNPMAEKLLNTYVTYNGGKSWSTLNAPSDV--CDEGEDDETCSLNLYMDPR-----S-SHKMKFSPFAPGV 462
                     ***********************9899999*********************953..3578999*******99533.....3.234556688**** PP

                     EEEEEEEESSHHSS.S-EEEEESSSSSS-EEEESS-EEEEEEGGGTEEEEEE-SSS-B-EEEEESSTTSSEEEEE--SS-BEEE CS
  Sortilin-Vps10 361 imgvGnvGkslksyeeadtfiSrDaGltWkevlkgahkyefGDqGsiivavkdeeketkelsYSlDeGktWeeykfsdekirvl 444
                     +++ G+   +l+ +ee+++f+S+DaG tW   + g  ++++   Gs+  a++de   t+++ YSl+ G+tW ++++   +i++l
      EPX72908.1 463 LLALGSASPHLSYKEEMSLFVSEDAGRTWALSRPGFQFFAMSGFGSVFFACDDE--VTNQVFYSLNRGRTWITLSLD-RPITPL 543
                     ******************************************************..6******************99.888775 PP

  == domain 2  score: 447.3 bits;  conditional E-value: 3.5e-137
                      EEEESSTTSS-EE-GGGGTTEEBE-EEE-STTS--EEEEEES-EEEEESSTTSSEEEEE-SS-BS....S--EEESSETTEEEEE........ CS
  Sortilin-Vps10    3 vyiSeDeGktwkkvkeklkgeaiqeivvhpfdkkkaylltdskklyvttDrGktwkkfklpfkpsl.saeplsfhakdkdwlialgek..... 89  
                      +yiS+D+Gktw+k +   k+++i +i+++ ++k+++yl++  +++y+t++rG+++ kfk+p+++++ ++ +l  h+++++wl+++ge+     
      EPX72908.1  759 IYISSDSGKTWNKFT---KEKFI-AIYPDSYQKNTVYLINHRNEVYFTNNRGRSFYKFKAPASANHnGKLTLMSHPTRPSWLMFTGESgceng 847 
                      8*************7...68899.6*****************************************9999****************99*9999 PP

                      ....BTTS-EEEESSTTSSEEEEESSEEEEEE-S.......TT-EEEEE-SSS-TTTTTTSEEEEEESSTTSS-EEEE.EEEEEEEEETTEEE CS
  Sortilin-Vps10   90 keskdckkkayystdggkswkklqesvkkcewakss..kkkeekilceekeeeseseekkklrlvssddffkskkelksegvvsfavvkeflv 180 
                        s++c+++++ys d g++w++l+++ + c+w + +    +++ i+c +++e++      + +l++s+dff+s +    ++vv+f++ ++++v
      EPX72908.1  848 PYSETCHDVVFYSLDYGDNWTQLSDEYEYCSWIRGEnlLVDDSLIFCLKTSEDD----IFQKNLYASTDFFESIEYEIMNNVVGFMIEDKYVV 936 
                      899*****************************66666799********998776....8999***********9877779************* PP

                      EEEE-TTSS-EEEEEESSTSS-EE-SSS...-B-TT--EEEEEEESSEEEEEEE-SSST..SEEEEEEE-TTSSCEEEEEEEEB-TTTS-B-- CS
  Sortilin-Vps10  181 vavkseetselalyvSldgkkfaeaefp..skkleekaytvlessehsiflavttssdk..elgsllkSnsnGtsfvlslenvnrneegyvdf 269 
                      +av+++e s+l+l+vS dg +fa ++fp   ++  +++yt+l+s++hs+f++vtts++   e+g +lkSnsnGt+f  slenvnr++ gyvdf
      EPX72908.1  937 LAVQDNEGSSLSLQVSIDGLDFASCDFPgyLNVNPKQSYTILDSTTHSLFIHVTTSARLgsEWGDVLKSNSNGTYFMTSLENVNRDSTGYVDF 1029
                      ****************************988888**********************955537******************************* PP

                      EEETTSTTEEEEEEE-T........TS-EEEEEESSTTS-EEEEE--TTSSSTTT-SSSSB-EEEEE-HHHHHTT-S-SS--B--TTSTT-EE CS
  Sortilin-Vps10  270 ekvegleGvilanvvknaeevkkgakkklktkItfddGrtWellkppdkdkygcsskklekcsLhLhsyteelerknvgrkvfSspsApGlim 362 
                      e+veg+ Gv+lan+v+n++e+++g +kkl++ Itf+dG +W+ l   d   ++ s k+ ++c+L+Lh+yte   r++++    Ss+ A+G+++
      EPX72908.1 1030 ERVEGILGVALANIVSNIHELGDGGDKKLHSLITFNDGLDWKRLVLVDG--EKISPKCGKSCHLNLHGYTE---RNQFSD-PTSSSAAVGIMI 1116
                      *********************************************9975..6899****************...556654.555555****** PP

                      EEEEEESSHHSS.S-EEEEESSSSSS-EEEESS-EEEEEEGGGTEEEEEE-SSS-B-EEEEESSTTSSEEEEE--SS-BEEEE CS
  Sortilin-Vps10  363 gvGnvGkslksyeeadtfiSrDaGltWkevlkgahkyefGDqGsiivavkdeeketkelsYSlDeGktWeeykfsdekirvld 445 
                      gvG+   +l +yee++tfiSrDaG++W ++++ ++ ++f+D+Gs+ivavk    +t+ ++YS+DeG+tW+e+ fsde+  v d
      EPX72908.1 1117 GVGSFSPYLLPYEESQTFISRDAGVSWYRIFDSPYLWAFLDSGSLIVAVKSMT-PTNVIQYSIDEGRTWKEFVFSDEEEVVVD 1198
                      ***************************************************95.*********************99766655 PP

>> Sortilin_C  Sortilin, neurotensin receptor 3, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.7   9.2   1.9e-25   3.1e-22       6     170 .]     552     712 ..     547     712 .. 0.82
   2 !  120.3   0.9   6.4e-38     1e-34       1     170 []    1201    1371 ..    1201    1371 .. 0.85

  Alignments for each domain:
  == domain 1  score: 79.7 bits;  conditional E-value: 1.9e-25
  Sortilin_C   6 tslkflllgksssedkekvvvislDFsklferkCke......eeDyekwsareeekkekC.llGhkqkyrrrkkdakCfvgekfkdpkv.eenCeCtee 96 
                  s  f l+++ +++  +k +v+s +F k+ +++C+       ++D+e w+++ e+ k+ C  +G+ ++++r+k+d  C   +++k+ ++ +++CeC e+
  EPX72908.1 552 YSDIFYLISEAEND-GSKRLVYSFNFGKF-SKECRYssqesgKNDFEVWYTNYENGKPVCsEMGRIESFWRKKPDVICSAPRSLKEVHHsTKDCECVES 648
                 67889999988777.6799999****986.699*8799988777********9766999956***********************955559******** PP

  Sortilin_C  97 DfeCdynfereesegkCvlaeklevpdeeekevCkkkkkkeksylkssgyrkipgntCeggkekdkdekvekpC 170
                  +eC+ +f+++e+ g+C    +l +  +  +  C + ++ e+  +++ +yr+ipgntC+ +k+ + +++++ +C
  EPX72908.1 649 SYECNTQFSSNED-GTC----ELLPFVG--SVICAA-EDVES--FEKYPYRRIPGNTCTPKKKDNFEKPQSFSC 712
                 **********876.9**....4444443..367*44.33333..459***********9887788888888888 PP

  == domain 2  score: 120.3 bits;  conditional E-value: 6.4e-38
  Sortilin_C    1 tepdstslkflllgksssedkekvvvislDFsklferkCke........eeDyekwsareeekkekCllGhkqkyrrrkkdakCfvgekfkdpkv.e 88  
                  t p++  +++lll ++++++   +  +++DF +l++r C          + D+ kw +++ e k+ CllG+ ++y r+++++kC +g++++ +++ +
  EPX72908.1 1201 TRPSGIGHEILLLTSDEDNS--PTSSVYIDFDPLYRRICGFdledldsgKGDFVKWIPTDLEGKQMCLLGRVSSYYRKNPEKKCKIGSSLSIKEEvV 1295
                  56788888999999887764..466669***********769999987666********965699***********************99986666* PP

  Sortilin_C   89 enCeCteeDfeCdynfereesegkCvlaeklevpdeeekevCkkkkkkeksylkssgyrkipgntCeggkekdkdekvekpC 170 
                  + C+Ct+ DfeCdynf r ++ g+Cvl+++l++p++e +e+C + +++   +++s+gy++ p + Cegg +   d+ +++ C
  EPX72908.1 1296 SRCQCTRMDFECDYNFRRMKE-GTCVLVHGLQPPNTE-SEQCAA-DDAV-QWKESTGYKRTPMTFCEGGLPL--DSGKTHAC 1371
                  ******************866.9************65.8***44.4444.5788***************444..56677777 PP

>> BNR  BNR/Asp-box repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.1    0.0015       2.5       1      11 [.      94     104 ..      94     105 .. 0.92
   2 !    7.6   2.1    0.0029       4.7       1      11 [.     138     148 ..     138     149 .. 0.93
   3 ?   -0.7   0.0       1.6   2.6e+03       7      11 ..     306     310 ..     301     311 .. 0.73
   4 !    8.0   0.8    0.0021       3.4       1      12 []     411     422 ..     411     422 .. 0.92
   5 !    6.2   0.0    0.0082        13       1      11 [.     482     492 ..     482     493 .. 0.90
   6 ?    5.8   0.1     0.012        19       1      10 [.     522     531 ..     522     531 .. 0.97
   7 ?   -0.4   0.0       1.3     2e+03       2       8 ..     572     578 ..     571     579 .. 0.89
   8 !    8.2   0.6    0.0018         3       1      12 []     760     771 ..     760     771 .. 0.93
   9 ?    0.4   0.0       0.7   1.1e+03       1      11 [.     800     810 ..     800     811 .. 0.89
  10 !    6.6   0.6    0.0065        11       1      11 [.     858     868 ..     858     869 .. 0.93
  11 ?    0.3   0.0      0.74   1.2e+03       2      12 .]    1062    1072 ..    1061    1072 .. 0.88
  12 !    6.6   0.0    0.0063        10       1      11 [.    1134    1144 ..    1134    1145 .. 0.91
  13 !    8.8   0.1    0.0012       1.9       1      11 [.    1175    1185 ..    1175    1186 .. 0.92

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0015
                 EEESSTTSS-E CS
         BNR   1 yyStDgGktWs 11 
                 y S+D+G++W+
  EPX72908.1  94 YLSKDNGENWQ 104
                 78********8 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0029
                 EEESSTTSS-E CS
         BNR   1 yyStDgGktWs 11 
                 yyS+D+G +W+
  EPX72908.1 138 YYSYDNGDSWN 148
                 9*********7 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 1.6
                 TSS-E CS
         BNR   7 GktWs 11 
                 G++W+
  EPX72908.1 306 GINWQ 310
                 88997 PP

  == domain 4  score: 8.0 bits;  conditional E-value: 0.0021
                 EEESSTTSS-EE CS
         BNR   1 yyStDgGktWsk 12 
                 y++++gGk+Ws+
  EPX72908.1 411 YVTYNGGKSWST 422
                 89********95 PP

  == domain 5  score: 6.2 bits;  conditional E-value: 0.0082
                 EEESSTTSS-E CS
         BNR   1 yyStDgGktWs 11 
                 ++S D G+tW 
  EPX72908.1 482 FVSEDAGRTWA 492
                 79********6 PP

  == domain 6  score: 5.8 bits;  conditional E-value: 0.012
                 EEESSTTSS- CS
         BNR   1 yyStDgGktW 10 
                 +yS ++G+tW
  EPX72908.1 522 FYSLNRGRTW 531
                 8********* PP

  == domain 7  score: -0.4 bits;  conditional E-value: 1.3
                 EESSTTS CS
         BNR   2 yStDgGk 8  
                 yS+++Gk
  EPX72908.1 572 YSFNFGK 578
                 9*****8 PP

  == domain 8  score: 8.2 bits;  conditional E-value: 0.0018
                 EEESSTTSS-EE CS
         BNR   1 yyStDgGktWsk 12 
                 y+S D GktW+k
  EPX72908.1 760 YISSDSGKTWNK 771
                 8*********86 PP

  == domain 9  score: 0.4 bits;  conditional E-value: 0.7
                 EEESSTTSS-E CS
         BNR   1 yyStDgGktWs 11 
                 y++ ++G+++ 
  EPX72908.1 800 YFTNNRGRSFY 810
                 89*******96 PP

  == domain 10  score: 6.6 bits;  conditional E-value: 0.0065
                 EEESSTTSS-E CS
         BNR   1 yyStDgGktWs 11 
                 +yS D G +W+
  EPX72908.1 858 FYSLDYGDNWT 868
                 8*********7 PP

  == domain 11  score: 0.3 bits;  conditional E-value: 0.74
                  EESSTTSS-EE CS
         BNR    2 yStDgGktWsk 12  
                  ++++ G  W++
  EPX72908.1 1062 ITFNDGLDWKR 1072
                  89*******85 PP

  == domain 12  score: 6.6 bits;  conditional E-value: 0.0063
                  EEESSTTSS-E CS
         BNR    1 yyStDgGktWs 11  
                  ++S+D G +W 
  EPX72908.1 1134 FISRDAGVSWY 1144
                  79********6 PP

  == domain 13  score: 8.8 bits;  conditional E-value: 0.0012
                  EEESSTTSS-E CS
         BNR    1 yyStDgGktWs 11  
                  +yS D G+tW+
  EPX72908.1 1175 QYSIDEGRTWK 1185
                  7*********8 PP

>> BNR_2  BNR repeat-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0   0.00034      0.56     140     200 ..      93     149 ..      86     178 .. 0.74
   2 ?    1.9   0.0     0.072   1.2e+02     235     258 ..     296     318 ..     276     328 .. 0.86
   3 ?    2.9   0.0     0.035        58     219     250 ..     459     492 ..     405     594 .. 0.69
   4 !    7.3   0.0    0.0016       2.5     137     228 ..     756     839 ..     742     887 .. 0.76
   5 ?   -3.5   0.0       3.2   5.2e+03     186     210 ..     987    1020 ..     971    1101 .. 0.56
   6 ?    2.0   0.0     0.066   1.1e+02     170     200 ..    1156    1186 ..    1131    1217 .. 0.65

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00034
                 EEEESSTTSS-EE----SSSEEEEEEEE.EEETTEEEEEEEE...EEEEEEESSTTSS-EE CS
       BNR_2 140 lelsddggktWkkgrvveqisgeiqpsilvekdgslvalaRsrkaaileseSedgGetWsk 200
                 l+ls+d+g  W+ g+v++q+ + i  s+++++  s  ++a   +++ ++ +S d+G++W+ 
  EPX72908.1  93 LYLSKDNGENWQNGDVPDQN-CHIK-SLFQHTYASSRVFAL--TDCNYVYYSYDNGDSWNY 149
                 689**************666.4444.344444445555554..46888999********87 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.072
                 EEEEEEESTT-GGG----EEEEEE CS
       BNR_2 235 kpLtvalskdngkswkevltLekg 258
                  +L v++s+d g++w+e+l ++kg
  EPX72908.1 296 GKLFVYVSQD-GINWQETLKFHKG 318
                 5899******.******9999886 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.035
                 ---SEEEEEE...EE--SSEEEEEEESTT-GGG-- CS
       BNR_2 219 kdgrlllvyN...hesapRkpLtvalskdngkswk 250
                  +g ll++ +   h s  ++++++ +s+d+g++w 
  EPX72908.1 459 APGVLLALGSaspHLSY-KEEMSLFVSEDAGRTWA 492
                 44444333334544444.66666666666666664 PP

  == domain 4  score: 7.3 bits;  conditional E-value: 0.0016
                 EEEEEEESSTTSS-EE----SSSEEEEEEEE.EEETTEEEEEEEE...EEEEEEESSTTSS-EEE-EEEEE----.......---SEEEEEE CS
       BNR_2 137 rallelsddggktWkkgrvveqisgeiqpsilvekdgslvalaRsrkaaileseSedgGetWskveltslpnpnsgidavtlkdgrlllvyN 228
                 +a++++s+d gktW+k +  + i  +i p  + +k++ + ++ R++     +  ++++G+++ k ++ +  n n ++ +++ +    +l+ +
  EPX72908.1 756 SAYIYISSDSGKTWNKFTKEKFI--AIYPDSY-QKNTVYLINHRNE-----VYFTNNRGRSFYKFKAPASANHNGKLTLMSHPTRPSWLMFT 839
                 68899*************99666..9999997.7777999999984.....34589999999999999999999999988888776666665 PP

  == domain 5  score: -3.5 bits;  conditional E-value: 3.2
                  EEEEEESSTTSS-EEE-.........EEEEE--- CS
       BNR_2  186 ileseSedgGetWskve.........ltslpnpn 210 
                  i++++S+  G +W +v           tsl+n+n
  EPX72908.1  987 IHVTTSARLGSEWGDVLksnsngtyfMTSLENVN 1020
                  4444444445555443222223333334444444 PP

  == domain 6  score: 2.0 bits;  conditional E-value: 0.066
                  EETTEEEEEEEE...EEEEEEESSTTSS-EE CS
       BNR_2  170 ekdgslvalaRsrkaaileseSedgGetWsk 200 
                   ++gsl++ + s + + + ++S d+G+tW++
  EPX72908.1 1156 LDSGSLIVAVKSMTPTNVIQYSIDEGRTWKE 1186
                  3445555555555555555556666666655 PP

>> BNR_6  BNR-Asp box repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.46   7.5e+02       1      11 [.      93     103 ..      93     105 .. 0.91
   2 ?   -0.7   0.0       1.3   2.2e+03       2      13 ..     301     311 ..     300     312 .. 0.77
   3 ?    1.5   0.0      0.25   4.1e+02       1      11 [.     481     491 ..     481     492 .. 0.89
   4 !    6.9   0.8    0.0047       7.6       1      12 [.     759     771 ..     759     772 .. 0.90
   5 ?    3.8   0.0     0.048        79       2      14 .]     858     870 ..     857     870 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.46
       BNR_6   1 LyrSeDfGknf 11 
                 Ly S+D G n+
  EPX72908.1  93 LYLSKDNGENW 103
                 899******99 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 1.3
       BNR_6   2 yrSeDfGknfkq 13 
                 y+S D G+n+ +
  EPX72908.1 301 YVSQD-GINWQE 311
                 78888.9***54 PP

  == domain 3  score: 1.5 bits;  conditional E-value: 0.25
       BNR_6   1 LyrSeDfGknf 11 
                 L++SeD G ++
  EPX72908.1 481 LFVSEDAGRTW 491
                 8*****98888 PP

  == domain 4  score: 6.9 bits;  conditional E-value: 0.0047
       BNR_6   1 LyrSeDfGknf.k 12 
                 +y+S+D Gk++ k
  EPX72908.1 759 IYISSDSGKTWnK 771
                 9**********44 PP

  == domain 5  score: 3.8 bits;  conditional E-value: 0.048
       BNR_6   2 yrSeDfGknfkqi 14 
                 + S D+G n++q+
  EPX72908.1 858 FYSLDYGDNWTQL 870
                 5688******996 PP

>> PSII_BNR  Photosynthesis system II assembly factor YCF48
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.7   0.0    0.0096        16     241     271 ..      77     108 ..      60     135 .. 0.78
   2 ?   -3.8   0.0       3.6   5.8e+03     128     138 ..     411     421 ..     400     425 .. 0.64
   3 ?   -1.2   0.0       0.6   9.8e+02     255     269 ..     480     494 ..     460     512 .. 0.87
   4 ?    4.2   0.0     0.013        21     123     182 ..     755     813 ..     731     843 .. 0.75
   5 ?   -2.8   0.0       1.8   2.9e+03     126     138 ..    1173    1185 ..    1136    1199 .. 0.60

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.0096
                 ESSS.S-EEEEESTT-EEEESSTTSS-EE-GG CS
    PSII_BNR 241 yrde.keiwvaGGsgtllvskDgGktwkkdks 271
                 ++d+ + +++   +g l+ skD+G++w++ ++
  EPX72908.1  77 FEDSsNVLFLDPDNGDLYLSKDNGENWQNGDV 108
                 444414567778899************98765 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 3.6
                 EEESSTTSSEE CS
    PSII_BNR 128 YrtedagknWk 138
                 Y t ++gk+W+
  EPX72908.1 411 YVTYNGGKSWS 421
                 56666666664 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 0.6
                 -EEEESSTTSS-EE- CS
    PSII_BNR 255 tllvskDgGktwkkd 269
                 +l+vs+D G+tw  +
  EPX72908.1 480 SLFVSEDAGRTWALS 494
                 789999999999765 PP

  == domain 4  score: 4.2 bits;  conditional E-value: 0.013
                 TT--EEEESSTTSSEEEEE-S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEE CS
    PSII_BNR 123 dvgaiYrtedagknWkaqveeavGsirniersedGeYvavssrGnfystwepgqdaWeph 182
                 +++ iY ++d+gk+W+   +e   +i   + +++  Y+ +  r + y+t + g ++++ +
  EPX72908.1 755 KSAYIYISSDSGKTWNKFTKEKFIAIYPDSYQKNTVYL-INHRNEVYFTNNRGRSFYKFK 813
                 45668888888888888888888888888888887777.677777777777777776655 PP

  == domain 5  score: -2.8 bits;  conditional E-value: 1.8
                  -EEEESSTTSSEE CS
    PSII_BNR  126 aiYrtedagknWk 138 
                   i  + d+g++Wk
  EPX72908.1 1173 VIQYSIDEGRTWK 1185
                  3333333333333 PP

>> CHB_HEX_C  Chitobiase/beta-hexosaminidase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.67   1.1e+03      40      53 ..      96     109 ..      93     128 .. 0.71
   2 ?    0.6   0.0      0.35   5.7e+02      36      55 ..     136     155 ..     132     171 .. 0.70
   3 ?   -3.2   0.0       5.5   8.9e+03      40      56 ..     413     427 ..     411     431 .. 0.78
   4 ?   -2.0   0.0       2.2   3.6e+03      37      55 ..     521     539 ..     519     542 .. 0.79
   5 ?   -1.1   0.0       1.2   1.9e+03      37      52 ..     759     774 ..     757     780 .. 0.81
   6 ?    0.0   0.1      0.53   8.6e+02      37      51 ..     857     871 ..     856     878 .. 0.83
   7 ?    8.8   0.0   0.00095       1.6      28      51 ..    1165    1188 ..    1141    1202 .. 0.78

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.67
   CHB_HEX_C  40 sldggetwqkytay 53 
                 s d+ge+wq+ ++ 
  EPX72908.1  96 SKDNGENWQNGDVP 109
                 89******998744 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.35
   CHB_HEX_C  36 tieYsldggetwqkytayep 55 
                  + Ys d+g++w+    +++
  EPX72908.1 136 YVYYSYDNGDSWNYFLLEHQ 155
                 588*********76554444 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 5.5
   CHB_HEX_C  40 sldggetwqkytayepv 56 
                 + +gg++w++ +  +p 
  EPX72908.1 413 TYNGGKSWSTLN--APS 427
                 5689*****999..665 PP

  == domain 4  score: -2.0 bits;  conditional E-value: 2.2
   CHB_HEX_C  37 ieYsldggetwqkytayep 55 
                 + Ysl+ g+tw +   ++p
  EPX72908.1 521 VFYSLNRGRTWITLSLDRP 539
                 67*********98775555 PP

  == domain 5  score: -1.1 bits;  conditional E-value: 1.2
   CHB_HEX_C  37 ieYsldggetwqkyta 52 
                 i  s d g+tw+k t+
  EPX72908.1 759 IYISSDSGKTWNKFTK 774
                 56799********994 PP

  == domain 6  score: 0.0 bits;  conditional E-value: 0.53
   CHB_HEX_C  37 ieYsldggetwqkyt 51 
                 + Ysld g++w++  
  EPX72908.1 857 VFYSLDYGDNWTQLS 871
                 56*********9987 PP

  == domain 7  score: 8.8 bits;  conditional E-value: 0.00095
   CHB_HEX_C   28 anvalPGltieYsldggetwqkyt 51  
                  + +  P   i+Ys+d+g+tw++  
  EPX72908.1 1165 VKSMTPTNVIQYSIDEGRTWKEFV 1188
                  455679999***********9876 PP

>> DUF1422  Protein of unknown function (DUF1422)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00023      0.37      79     109 ..      24      54 ..      14      58 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00023
     DUF1422  79 alvraeyPeiGsnflsvvllvvlvlwiglkl 109
                  ++r++ P+iGsn l+++ ++++v  +  k+
  EPX72908.1  24 MYIRTRMPHIGSNILPILSCILVVSLLFSKI 54 
                 479***************9999999888887 PP

>> preSET_CXC  CXC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   1.8    0.0009       1.5       9      24 ..     639     654 ..     627     658 .. 0.89
   2 ?    6.6   1.4    0.0066        11      11      23 ..    1296    1308 ..    1293    1311 .. 0.91

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0009
  preSET_CXC   9 stkeClCvranRECdP 24 
                 stk C+Cv ++ EC+ 
  EPX72908.1 639 STKDCECVESSYECNT 654
                 699***********96 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0066
  preSET_CXC   11 keClCvranRECd 23  
                  ++C+C r + ECd
  EPX72908.1 1296 SRCQCTRMDFECD 1308
                  58**********9 PP

>> F5_F8_type_C  F5/8 type C domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1       4.5   7.4e+03      68      79 ..      93     105 ..      90     113 .. 0.79
   2 ?   -1.2   0.1       1.2     2e+03      68     113 ..     137     178 ..     135     190 .. 0.64
   3 ?    1.7   0.0      0.16   2.7e+02      62      80 ..     294     312 ..     280     331 .. 0.84
   4 ?   -2.1   0.0       2.4   3.9e+03      67      80 ..     520     534 ..     517     538 .. 0.86
   5 ?    7.5   0.1    0.0025       4.2      61      87 ..     752     783 ..     741     824 .. 0.78
   6 ?    1.3   0.1      0.21   3.4e+02      68      82 ..     857     872 ..     838     884 .. 0.89
   7 ?    2.8   0.0     0.072   1.2e+02      67      82 ..    1173    1189 ..    1165    1211 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 4.5
                   EEEESS.SSSEEE CS
  F5_F8_type_C  68 iqvsdd.getWtt 79 
                   ++ s+d ge+W++
    EPX72908.1  93 LYLSKDnGENWQN 105
                   67888879***74 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 1.2
                   EEEESS.SSSEEEEEEECEEESSSSSSSEEEEEE.EEEEEEEEEEEEE CS
  F5_F8_type_C  68 iqvsdd.getWttvkdekvpgnsdnstpvtntfd.ppvkaryvrltpt 113
                   +++s d g++W+++     + + +   p ++ f+ ++++  yv ++ +
    EPX72908.1 137 VYYSYDnGDSWNYFLL---EHQVN---PSQIPFHfHATNPDYVIFNNM 178
                   78997769***98877...55555...555555555666666665555 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.16
                   EEEEEEEEEESSSSSEEEE CS
  F5_F8_type_C  62 yvksykiqvsddgetWttv 80 
                    + +  ++vs+dg +W++ 
    EPX72908.1 294 ATGKLFVYVSQDGINWQET 312
                   5567779*********875 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 2.4
                   EEEEESS.SSSEEEE CS
  F5_F8_type_C  67 kiqvsdd.getWttv 80 
                   ++ +s++ g+tW t+
    EPX72908.1 520 QVFYSLNrGRTWITL 534
                   6889*999****987 PP

  == domain 5  score: 7.5 bits;  conditional E-value: 0.0025
                   SEEEEEEEEEESS.SSSEEEEEEECE....EE CS
  F5_F8_type_C  61 ayvksykiqvsdd.getWttvkdekv....pg 87 
                   ++ ks  i++s+d g+tW+++  ek     p+
    EPX72908.1 752 GFSKSAYIYISSDsGKTWNKFTKEKFiaiyPD 783
                   7899*****************99666533333 PP

  == domain 6  score: 1.3 bits;  conditional E-value: 0.21
                   EEEESS.SSSEEEEEE CS
  F5_F8_type_C  68 iqvsdd.getWttvkd 82 
                   + +s+d g++Wt+++d
    EPX72908.1 857 VFYSLDyGDNWTQLSD 872
                   789**********998 PP

  == domain 7  score: 2.8 bits;  conditional E-value: 0.072
                    EEEEESS.SSSEEEEEE CS
  F5_F8_type_C   67 kiqvsdd.getWttvkd 82  
                     iq+s d g+tW++++ 
    EPX72908.1 1173 VIQYSIDeGRTWKEFVF 1189
                    59***999*****9876 PP

>> Ion_trans  Ion transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1      0.75   1.2e+03     162     211 ..      99     149 ..      30     152 .. 0.64
   2 ?   -0.7   0.1      0.42   6.9e+02     166     216 ..     968    1014 ..     908    1016 .. 0.85
   3 ?    9.7   0.2   0.00027      0.45     132     190 ..    1396    1460 ..    1388    1467 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.75
                 SCCSTSSSTTTSSS..SSSHHHHHHHHHHHHTTSSHHHHHHHHHHHSHHHHH CS
   Ion_trans 162 caktwenpnngntn..Fdnfftallwlfrlmttegwgdilyatldekskval 211
                 + ++w+n + ++ n   +++f+  +++ r+    +++ ++y   ++  ++++
  EPX72908.1  99 NGENWQNGDVPDQNchIKSLFQHTYASSRVFALTDCNYVYYSYDNGD-SWNY 149
                 55789999888888667789999999999999999999999999998.4433 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.42
                  TSSSTTTSSSSSSHHHHHHHHHH..HHTTSSHHHHHHHHHHHSHHHHHHHHHH CS
   Ion_trans  166 wenpnngntnFdnfftallwlfr..lmttegwgdilyatldekskvaliyfvi 216 
                    np++++t  d+  ++l+  ++     +  wgd+l  + ++       yf++
  EPX72908.1  968 NVNPKQSYTILDSTTHSLFIHVTtsARLGSEWGDVLKSNSNGT------YFMT 1014
                  5789999999999999999988844456679***********9......7775 PP

  == domain 3  score: 9.7 bits;  conditional E-value: 0.00027
                  HHHHHHHHHHHHHHHHHHHHHTTSCCCCCCSCCSTSSSTTTSSSSSS........HHHHHHHHHHHH CS
   Ion_trans  132 nvlllllvvlfifaligvqlfkgklreknecaktwenpnngntnFdn........fftallwlfrlm 190 
                    ++l++++++if+  ++q+ kg +r       ++e+p+n+ ++F++        ff+al+ ++r++
  EPX72908.1 1396 VSVILAVIFGYIFYRYSQQYLKGAIRLG--VDSEGESPINKSITFTKgifasipiFFYALYESIRSI 1460
                  4578888888888888888888888833..55799************99999********9999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1490 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       542  (0.0302304); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.88u 0.32s 00:00:01.20 Elapsed: 00:00:00.47
# Mc/sec: 9500.61
//
Query:       EPX72909.1  [L=187]
Description: translation initiation factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.3e-22   77.7   0.5    1.2e-21   77.1   0.5    1.3  1  SUI1      Translation initiation factor SUI1


Domain annotation for each model (and alignments):
>> SUI1  Translation initiation factor SUI1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.1   0.5   6.4e-26   1.2e-21       3      73 ..      95     167 ..      93     172 .. 0.94

  Alignments for each domain:
  == domain 1  score: 77.1 bits;  conditional E-value: 6.4e-26
        SUI1   3 pkihirleqrggrKkvTtvsgleafgidlkklakelkkkfacsgsvvk..dggeeiqvQGdqrkkvaelLtek 73 
                 +k+ i++ +r++rK+vTtv+gl+af+i+ kk+ak l +kfa+++sv+k  d+++ei++QGd   ++ +++ ek
  EPX72909.1  95 SKVYIKTIERTKRKRVTTVQGLDAFNIETKKAAKMLANKFATGASVTKtaDKKDEIVIQGDLGYDIFDYIAEK 167
                 79********************************************9988778*****************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1202  (0.0670422); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1396.97
//
Query:       EPX72910.1  [L=326]
Description: hypothetical protein SOCG_00672 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.72   10.3   4.6       0.25   11.8   0.4    2.4  3  PPV_E1_N  E1 Protein, N terminal domain


Domain annotation for each model (and alignments):
>> PPV_E1_N  E1 Protein, N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.4   1.4e-05      0.25      71     107 ..      99     135 ..      39     151 .. 0.77
   2 ?   -0.5   0.1      0.09   1.6e+03      61     101 ..     183     221 ..     138     247 .. 0.64
   3 ?   -1.6   0.1      0.19   3.4e+03      80      98 ..     250     265 ..     219     283 .. 0.58

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 1.4e-05
    PPV_E1_N  71 qvLKRKylkSPksrdvaelSPrLeaislekqskkakr 107
                 + LK  y +SP +r++ +lSP L+  sl ++ k  +r
  EPX72910.1  99 RFLKEMYSVSPTRRSLKSLSPGLRRKSLLPKPKMFQR 135
                 579*********************9999888554443 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.09
    PPV_E1_N  61 qeaeesekalqvLKRKylkSPksrdvaelSPrLeaislekq 101
                 + +e ++++l++++R   +SP +  v+    r+ ais+ek 
  EPX72910.1 183 HSKERTQESLANIRRE-KESPATPPVNT-ESRVPAISMEKS 221
                 4455566667777665.57887765544.447777777665 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 0.19
    PPV_E1_N  80 SPksrdvaelSPrLeaisl 98 
                 SPk+  v   SP+L+   +
  EPX72910.1 250 SPKN--V-YSSPQLKEKEI 265
                 3333..1.33666664333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (326 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       484  (0.0269954); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 2289.25
//
Query:       EPX72911.1  [L=199]
Description: ribosome assembly protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-12   47.4   9.0    3.3e-12   46.1   9.0    1.6  1  NUFIP1    Nuclear fragile X mental retardation-interacting pr


Domain annotation for each model (and alignments):
>> NUFIP1  Nuclear fragile X mental retardation-interacting protein 1 (NUFIP1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.1   9.0   1.8e-16   3.3e-12      11      53 .]      91     133 ..      85     133 .. 0.91

  Alignments for each domain:
  == domain 1  score: 46.1 bits;  conditional E-value: 1.8e-16
      NUFIP1  11 tsitleTpeeIakWreERkKnyPtkaniekkkkkeeekkkrge 53 
                  +i+l+TpeeI+ W++ERk+n+Pt +n++ kk+k  + +k++e
  EPX72911.1  91 RNISLNTPEEIDSWIQERKRNWPTEKNMMLKKEKSVNDSKEKE 133
                 5788*****************************9999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1377  (0.0768029); expected 358.6 (0.02)
Passed bias filter:                      488  (0.0272185); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 1368.04
//
Query:       EPX72912.1  [L=1344]
Description: leptomycin efflux transporter Pmd1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   9.3e-119  396.1  39.3    1.7e-59  201.7  13.0    2.2  2  ABC_membrane    ABC transporter transmembrane region
    1.4e-66  223.2   0.0    1.4e-32  113.1   0.0    2.7  2  ABC_tran        ABC transporter
    1.6e-13   50.6   4.1      4e-05   23.2   4.1    4.0  3  SMC_N           RecF/RecN/SMC N terminal domain
    5.2e-06   26.1   2.2      0.011   15.5   0.4    2.7  2  AAA_29          P-loop containing region of AAA domain
    8.9e-06   25.7   0.0       0.31   10.9   0.0    3.4  3  RsgA_GTPase     RsgA GTPase
    2.2e-05   24.9   1.9       0.17   12.2   0.2    3.4  3  AAA_16          AAA ATPase domain
    6.4e-05   22.8   0.4       0.98    9.1   0.0    3.6  4  AAA_30          AAA domain
    0.00011   22.2   0.0          1    9.1   0.0    4.0  4  AAA_21          AAA domain, putative AbiEii toxin, Type IV TA
    0.00018   20.5   1.9     0.0068   15.3   0.0    2.9  3  ABC_ATPase      Predicted ATPase of the ABC class
    0.00021   21.6   4.0       0.53   10.6   0.1    3.8  2  AAA_22          AAA domain
    0.00032   20.0   1.8       0.41    9.9   0.0    3.7  4  Zeta_toxin      Zeta toxin
    0.00039   20.3   0.0       0.76    9.4   0.0    2.6  2  AAA_15          AAA ATPase domain
     0.0015   18.1   0.0       0.87    9.1   0.0    2.4  2  AAA_7           P-loop containing dynein motor region
     0.0015   18.1   0.8       0.47   10.0   0.5    3.1  2  AAA_25          AAA domain
     0.0019   18.8   0.6       0.84   10.1   0.0    2.7  2  AAA_23          AAA domain
     0.0031   17.2   0.3        3.1    7.4   0.0    3.5  3  SRP54           SRP54-type protein, GTPase domain
     0.0047   17.1   2.9          2    8.7   0.3    3.7  2  SbcCD_C         Putative exonuclease SbcCD, C subunit
     0.0076   15.5   0.1        2.3    7.3   0.0    2.8  3  G-alpha         G-protein alpha subunit
  ------ inclusion threshold ------
      0.012   15.7   0.9        1.9    8.5   0.1    3.0  2  DUF87           Helicase HerA, central domain
      0.014   15.6   0.1          7    6.8   0.0    2.9  2  AAA_33          AAA domain
       0.03   14.3   0.3         15    5.6   0.0    3.6  4  AAA_5           AAA domain (dynein-related subfamily)
      0.045   14.3   0.0         17    6.0   0.0    2.8  2  AAA_18          AAA domain
       0.12   12.2   0.1        1.3    8.9   0.0    2.3  2  APS_kinase      Adenylylsulphate kinase
       0.14   12.0   0.2          3    7.7   0.0    2.9  3  Rad17           Rad17 P-loop domain
       0.59   10.4   6.3        4.1    7.6   0.2    3.4  2  AAA_28          AAA domain
        1.7    8.9   4.0        1.2    9.4   0.1    3.0  2  DPM3            Dolichol-phosphate mannosyltransferase subuni


Domain annotation for each model (and alignments):
>> ABC_membrane  ABC transporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  201.7  13.0   2.4e-62   1.7e-59       4     273 ..      88     360 ..      86     361 .. 0.98
   2 !  200.3  18.2   6.6e-62   4.5e-59       1     272 [.     777    1049 ..     777    1051 .. 0.99

  Alignments for each domain:
  == domain 1  score: 201.7 bits;  conditional E-value: 2.4e-62
                   HHHHHHHHHHHHHHHHHHHHHHHHHHHSSTCCHH.....HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTHHHHHHS CS
  ABC_membrane   4 iillailagvlsplfplvlgrildtlldkgdpet.....ealnvysllllllglaqfilallqsyllnvtgerlskrlrrklfkkilrqpmsffdtn 95 
                   ++++ai ag+ +pl++lv g++ + ++d ++ +      +++n++ l++++++++ f ++++++ +++v ger+s+r+r+++++++l+q++++fd+ 
    EPX72912.1  88 GCITAIGAGLGMPLMSLVAGKLAKAFTDLASGRGaatfqHDVNHFVLYFIYIAVGIFGCSYVYTVTFIVSGERISRRIRQQYLHAVLSQNVGYFDRL 184
                   789*************************86666688999********************************************************** PP

                   CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHH CS
  ABC_membrane  96 svGellsrltndvsklrdglgeklglffqslltfvgglivmfylgwkltlvllailpliilvsaviakilkklkkkeqkavakassvaeEslsgirt 192
                    +Ge+++r+t d++ ++dg+gek+gl++ +l+tf++g++++f+  wk+tl++ ++l+ i+  +a   k++kk++k +  ++  +s+++eE+ls++r 
    EPX72912.1 185 GAGEITTRITGDTNYIQDGMGEKVGLVLFALATFLSGFVIAFIRHWKFTLIISSMLLAILGGIACGVKFIKKYTKAQIAQLTSSSTFVEEVLSNVRN 281
                   ************************************************************************************************* PP

                   HHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSTHHHHHHHHHHHHHHHHH CS
  ABC_membrane 193 VkafgreeyflekfekaleeakkagikkaianglligitqllgllsyalalwfGttlvisgelsvgdlvvflslfailfga 273
                     afg ++   + f+k l  a+++gikk i+ g++ g+++++++ +y la+w G+ l ++gel+v++  +++++fa+l+ +
    EPX72912.1 282 AFAFGTQDLLADTFTKFLIPARQNGIKKSIVMGIMVGWMFFVAYGAYGLAFWEGGRLLHAGELTVDK--MISCFFAVLIAS 360
                   *******************************************************************..********9975 PP

  == domain 2  score: 200.3 bits;  conditional E-value: 6.6e-62
                    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSTCCHH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTHHHHHH CS
  ABC_membrane    1 liliillailagvlsplfplvlgrildtlldkgdpet.ealnvysllllllglaqfilallqsyllnvtgerlskrlrrklfkkilrqpmsffdt 94  
                    l+++i++++++g+++p++++v++r+l++++  ++p++ ++++++ +++l+l++a+f+   ++++ ++++ + l  r+r+ lf+ +lrq+++ffd+
    EPX72912.1  777 LLIGIVASMVCGAAYPVQAVVYARFLNIFTNLNSPDYfHKISIFGIYWLILAIAEFFGYSISEFSMSYVLQSLLQRIRWHLFRTLLRQDVEFFDR 871 
                    689******************************************************************************************** PP

                    ..SCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  ABC_membrane   95 ..nsvGellsrltndvsklrdglgeklglffqslltfvgglivmfylgwkltlvllailpliilvsaviakilkklkkkeqkavakassvaeEsl 187 
                      n+vG l++ l++ +++l+ + g++lg+f+q l+++v++ i+++ +gwkl+lv+l+++plii   +++   l +++++ ++++  + ++a Es 
    EPX72912.1  872 teNTVGALTTSLSTSIQNLEGLSGSTLGTFVQILTNVVSVSILSLATGWKLALVTLSTSPLIICAGYYRVAALDRIQDNLSNSYKASAAFACEST 966 
                    *********************************************************************************************** PP

                    HTHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSTHHHHHHHHHHHHHHHH CS
  ABC_membrane  188 sgirtVkafgreeyflekfekaleeakkagikkaianglligitqllgllsyalalwfGttlvisgelsvgdlvvflslfailfg 272 
                    s+i+tV +++re++++e +  +l ++ + +  + +++gll++++q++++l++al++w+G+tl+++ge+s+ +  +++++++i+fg
    EPX72912.1  967 SAIKTVASLTRESKVYESYSASLIKPGRETAIASLISGLLFSASQAVTFLVNALTFWYGATLMKTGEYSLVQ--FYTCFISIVFG 1049
                    ************************************************************************..********998 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.4   0.0   1.1e-33   7.7e-31       1     137 []     428     586 ..     428     586 .. 0.90
   2 !  113.1   0.0     2e-35   1.4e-32       1     137 []    1119    1269 ..    1119    1269 .. 0.87

  Alignments for each domain:
  == domain 1  score: 107.4 bits;  conditional E-value: 1.1e-33
                 EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH.................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.................... RF
    ABC_tran   1 lknvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren.................... 79 
                 l+n sl + +g+++a+vG +G+GKSt++ l+ + ++p +G++ ldg+dl++ ++ slr +i+ ++qep lf  + v +n                    
  EPX72912.1 428 LENFSLLCPAGKITALVGASGSGKSTIVGLVERFYDPIAGQVMLDGEDLRDLNIASLRGHISLVQQEPVLFGAT-VFDNiaygltdemqsaltedelre 525
                 68999******************************************************************999.***********9999999996666 PP

                 .....HHHTCHHHHHHHSTTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 .....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  80 .....esdeeiekalsklglkelkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137
                      ++++++++++ +l  +   +t+v++++  +SgGqkqr+a+ara++++pk+lllDE+t+
  EPX72912.1 526 kvydaAKTANAYDFIMSLTEQF--NTNVGQRGFLMSGGQKQRIAIARAIISDPKILLLDEATS 586
                 6655555555666666666555..99999********************************96 PP

  == domain 2  score: 113.1 bits;  conditional E-value: 2e-35
                  EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH.................H CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.................x RF
    ABC_tran    1 lknvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren.................e 80  
                  l+ ++l++k+g+ va+vG +G+GKSt + l+ + ++ ++G++ + g d+++ + + +rk+i+ ++qep+l +++ +ren                  
  EPX72912.1 1119 LRGLNLTVKPGQFVAFVGASGCGKSTTIGLIERFYDCESGSVIVGGVDVRDYNVNDYRKQIALVSQEPTLYQGT-IRENivlgasrdvtdeeiiecC 1214
                  5789*********************************************************************9.********98874444433332 PP

                  HHTCHHHHHHHSTTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   81 sdeeiekalsklglkelkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137 
                  + ++i++++  l + +  +t  ++++ssLSgGqkqr+a+aral+++pk+lllDE+t+
  EPX72912.1 1215 KMANIHDFIMGLPNGY--ETLSGQKGSSLSGGQKQRIAIARALIRNPKILLLDEATS 1269
                  3333555555555444..88888999*****************************96 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   4.1   5.8e-08     4e-05      25     213 ..     439     630 ..     432     637 .. 0.59
   2 ?    1.2   0.0      0.31   2.2e+02      25      41 ..    1130    1146 ..    1114    1153 .. 0.84
   3 !   16.0   0.0   8.9e-06    0.0061     136     207 ..    1240    1307 ..    1197    1312 .. 0.78

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 5.8e-08
                 SEEEEEESTTSSHHHHHHHH.HH........HCTT.TTTTTTCHCCCCCC--BTTCSSTTEEEEEEEEEETTEE....SSSSSSCEEEEEEEETTSEEE CS
                 xxxxxxxxxxxxxxxxxxxx.xx........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  25 sftaivGpNGSGKsnlldAi.lF........vLGersakklrseklsdlihkskekasvkkaeveitfdnedkk....lkiekeevsisrrvkrkgese 110
                 ++ta+vG+ GSGKs ++  + +F        +L  ++ + l  ++l+  i+  ++++ +  a+v   fdn        ++   +e +++ +v+   ++ 
  EPX72912.1 439 KITALVGASGSGKSTIVGLVeRFydpiagqvMLDGEDLRDLNIASLRGHISLVQQEPVLFGATV---FDNIAYGltdeMQSALTEDELREKVYDAAKTA 534
                 5788888888888888766533411111111233333333333444444444444444444444...33333330001233333344444444444433 PP

                 EEETTEEE-HHHHHHHHHCTT-STTCS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC-SCEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 111 ykingkevtkkevsellesagiskelLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemlekadklv 209
                  + +      ++ +  + + g+   l+SgG+k+ +a+a    i  ++   + llDe  +aLD k   +v + l+++s +   ivi++r  ++++ad++v
  EPX72912.1 535 NAYDFIMSLTEQFNTNVGQRGF---LMSGGQKQRIAIARA--I--ISDPKILLLDEATSALDSKSEVIVQKALDNASRSRTTIVIAHRLSTIRNADNIV 626
                 3333333333333333333333...89*****98888743..3..44556889********************************************99 PP

                 EEEE CS
                 xxxx RF
       SMC_N 210 gvtk 213
                  v  
  EPX72912.1 627 VVNA 630
                 8865 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.31
                  SEEEEEESTTSSHHHHH CS
                  xxxxxxxxxxxxxxxxx RF
       SMC_N   25 sftaivGpNGSGKsnll 41  
                  +f a vG+ G+GKs  +
  EPX72912.1 1130 QFVAFVGASGCGKSTTI 1146
                  69999*********765 PP

  == domain 3  score: 16.0 bits;  conditional E-value: 8.9e-06
                  CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC-SC CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  136 lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemlekadk 207 
                  +LSgG+k+ +a+a       ++   + llDe  +aLD +  k v e l+++s+    + i++r   +++ad 
  EPX72912.1 1240 SLSGGQKQRIAIARA----LIRNPKILLLDEATSALDSNSEKVVQEALNKASEGRTTVAIAHRLSSIQHADC 1307
                  8*******9888754....356666899***********************************999999875 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.4   1.5e-05     0.011      22      39 ..     437     455 ..     431     458 .. 0.88
   2 !    9.2   0.1    0.0014         1      16      39 ..    1123    1146 ..    1115    1149 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.5e-05
      AAA_29  22 kg.atlltGpsGsGKSTll 39 
                 +g +t l+G+sGsGKST++
  EPX72912.1 437 AGkITALVGASGSGKSTIV 455
                 5779*************97 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.0014
      AAA_29   16 tieidlkgatlltGpsGsGKSTll 39  
                   +++++ +++ ++G+sG GKST +
  EPX72912.1 1123 NLTVKPGQFVAFVGASGCGKSTTI 1146
                  5677877799************76 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       2.4   1.7e+03      15      53 ..     278     313 ..     266     314 .. 0.75
   2 !   10.2   0.0   0.00077      0.53      98     117 ..     437     456 ..     414     468 .. 0.89
   3 !   10.9   0.0   0.00045      0.31      85     120 ..    1114    1150 ..    1081    1161 .. 0.69

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 2.4
                  S--EEEEEEESTTTT--HHHHHHHHHHHHHTT-EEEEEE CS
  RsgA_GTPase  15 NvdqllivvslkepelslnlldrfLvlaeekgiepvivl 53 
                  Nv ++   +++ +++l  ++ ++fL+ a ++gi+  iv+
   EPX72912.1 278 NVRNA---FAFGTQDLLADTFTKFLIPARQNGIKKSIVM 313
                  55554...3455567889999************999986 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00077
                  TTSEEEEECSTTSSHHHHHH CS
  RsgA_GTPase  98 kdktsvlvGqSGvGKStLin 117
                  ++k+++lvG SG GKSt++ 
   EPX72912.1 437 AGKITALVGASGSGKSTIVG 456
                  469**************986 PP

  == domain 3  score: 10.9 bits;  conditional E-value: 0.00045
                   TTHTTHHHHHHHCTT.SEEEEECSTTSSHHHHHHHHC CS
  RsgA_GTPase   85 ktkegleelkellkd.ktsvlvGqSGvGKStLinall 120 
                   k+ + l+ l+  +k  +++++vG SG GKSt i  + 
   EPX72912.1 1114 KNIQVLRGLNLTVKPgQFVAFVGASGCGKSTTIGLIE 1150
                   44455566666777669**************887665 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.2   0.00025      0.17      25      52 ..     439     480 ..     430     628 .. 0.54
   2 ?   -2.3   0.0       7.3     5e+03      70     125 ..     847     907 ..     836     929 .. 0.61
   3 !   10.2   0.0     0.001      0.71      21      63 ..    1128    1168 ..    1113    1296 .. 0.58

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00025
      AAA_16  25 elvllsGesGvGKsslv...rellralekd...........g 52 
                  ++ l+G+sG+GKs++v   +++++++ ++           +
  EPX72912.1 439 KITALVGASGSGKSTIVglvERFYDPIAGQvmldgedlrdlN 480
                 7899************94445555566655555555555552 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 7.3
      AAA_16  70 salaqalareellrqllde......aesaeleawrekleealaavpelagaeasrllellkr 125
                 + l+q + + +l+r ll++       +++ ++a  + l ++++    l+g+    + + l++
  EPX72912.1 847 QSLLQRIRW-HLFRTLLRQdveffdRTENTVGALTTSLSTSIQNLEGLSGSTLGTFVQILTN 907
                 448888955.9999999984444443333444444444444444444555444555555555 PP

  == domain 3  score: 10.2 bits;  conditional E-value: 0.001
      AAA_16   21 sgrpelvllsGesGvGKsslvrellralekdggiflrgkcdql 63  
                   g  + v ++G+sG+GKs+ +  + r +  + g ++ g  d  
  EPX72912.1 1128 PG--QFVAFVGASGCGKSTTIGLIERFYDCESGSVIVGGVDVR 1168
                  44..6899*************9999866666566655555555 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.0    0.0017       1.2      18      49 ..     438     469 ..     431     476 .. 0.82
   2 ?   -3.0   0.0       7.2     5e+03      81     112 ..     560     599 ..     514     608 .. 0.61
   3 !    9.1   0.0    0.0014      0.98      14      51 ..    1125    1162 ..    1119    1173 .. 0.86
   4 ?   -1.2   0.0         2   1.4e+03      82     114 ..    1252    1284 ..    1200    1296 .. 0.73

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0017
      AAA_30  18 drvavltGpAGtGKttalkalreaweaaggrv 49 
                  ++++l+G+ G+GK+t+++ +++ ++   g+v
  EPX72912.1 438 GKITALVGASGSGKSTIVGLVERFYDPIAGQV 469
                 45999***************999987665555 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 7.2
      AAA_30  81 k........grarlepgtllivDEagmvdtkqlaallkaa 112
                 +        +ra +++ ++l+ DEa  +  ++ + ++++a
  EPX72912.1 560 GgqkqriaiARAIISDPKILLLDEATSALDSKSEVIVQKA 599
                 1455555554455566689999999877555555555555 PP

  == domain 3  score: 9.1 bits;  conditional E-value: 0.0014
      AAA_30   14 ltsgdrvavltGpAGtGKttalkalreaweaaggrvig 51  
                  + ++ ++++ +G+ G GK+t+++ +++ ++ + g+vi+
  EPX72912.1 1125 TVKPGQFVAFVGASGCGKSTTIGLIERFYDCESGSVIV 1162
                  556678999********************999777765 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 2
      AAA_30   82 grarlepgtllivDEagmvdtkqlaallkaaek 114 
                  +ra +++ ++l+ DEa  +  ++ ++++++a +
  EPX72912.1 1252 ARALIRNPKILLLDEATSALDSNSEKVVQEALN 1284
                  45566677999*****99966666666665543 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   0.0    0.0015         1       1      35 [.     440     474 ..     440     497 .. 0.70
   2 ?    0.3   0.0      0.69   4.8e+02     235     272 ..     556     590 ..     522     613 .. 0.83
   3 ?    6.3   0.0     0.011       7.5       1      39 [.    1131    1172 ..    1131    1201 .. 0.71
   4 ?   -0.1   0.0      0.96   6.6e+02     236     271 ..    1240    1272 ..    1239    1296 .. 0.76

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.0015
      AAA_21   1 lnvliGpNgsGKSnLLdaldllarldrdvegltde 35 
                 +++l+G+ gsGKS++  + + + + ++ + +l  e
  EPX72912.1 440 ITALVGASGSGKSTIVGLVERFYDPIAGQVMLDGE 474
                 79*************88887776654444444444 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.69
      AAA_21 235 relSdGtkrllalltallralkkgsllliDEpEngLHP 272
                 + +S G+k+ +a++ a+++++   ++ll+DE  + L+ 
  EPX72912.1 556 FLMSGGQKQRIAIARAIISDP---KILLLDEATSALDS 590
                 5799*****999999999999...9******8888776 PP

  == domain 3  score: 6.3 bits;  conditional E-value: 0.011
      AAA_21    1 lnvliGpNgsGKSnLLdaldllarl...drdvegltdelsgg 39  
                  + +++G+ g+GKS+ + +++ + ++      v g    + + 
  EPX72912.1 1131 FVAFVGASGCGKSTTIGLIERFYDCesgSVIVGGVDVRDYNV 1172
                  6789***************99988766533333333333333 PP

  == domain 4  score: -0.1 bits;  conditional E-value: 0.96
      AAA_21  236 elSdGtkrllalltallralkkgsllliDEpEngLH 271 
                  +lS G+k+ +a++ al+r +   ++ll+DE  + L+
  EPX72912.1 1240 SLSGGQKQRIAIARALIRNP---KILLLDEATSALD 1272
                  68999999989999999988...9******777776 PP

>> ABC_ATPase  Predicted ATPase of the ABC class
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.65   4.5e+02     243     265 ..     436     459 ..     433     468 .. 0.75
   2 ?    2.8   0.1     0.059        41     323     353 ..     558     588 ..     531     631 .. 0.85
   3 !   15.3   0.0   9.8e-06    0.0068     297     354 ..    1214    1272 ..    1194    1315 .. 0.78

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.65
                 -SS.EEEEEE-TTSSHHHHHHHHH CS
  ABC_ATPase 243 pkG.vtlIvGggfhGKsTLLeAle 265
                 p G +t++vG    GKsT++  +e
  EPX72912.1 436 PAGkITALVGASGSGKSTIVGLVE 459
                 6677**************975444 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.059
                 --HHHHHHHHHHHHHHTT-SEEEEEGGGS-H CS
  ABC_ATPase 323 ASGStsqAanimealeagakllLiDEDtsAt 353
                  SG   q  +i++a+  + k+lL+DE tsA 
  EPX72912.1 558 MSGGQKQRIAIARAIISDPKILLLDEATSAL 588
                 599999***********************95 PP

  == domain 3  score: 15.3 bits;  conditional E-value: 9.8e-06
                  EEEE--TTTB---CCC--STTEEE.SS--HHHHHHHHHHHHHHTT-SEEEEEGGGS-HH CS
  ABC_ATPase  297 vkgvDispFinnLPegkdttkfst.edASGStsqAanimealeagakllLiDEDtsAtN 354 
                   k ++i  Fi  LP+g +t +    +  SG   q  +i++al ++ k+lL+DE tsA  
  EPX72912.1 1214 CKMANIHDFIMGLPNGYETLSGQKgSSLSGGQKQRIAIARALIRNPKILLLDEATSALD 1272
                  56789**************965551567*****************************65 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.4    0.0021       1.4       6      30 ..     439     463 ..     437     617 .. 0.65
   2 !   10.6   0.1   0.00077      0.53       5     108 ..    1129    1282 ..    1125    1300 .. 0.70

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.0021
      AAA_22   6 gilvvtGesGtGKTtllrrlleqld 30 
                 +i++++G sG+GK+t +  + + +d
  EPX72912.1 439 KITALVGASGSGKSTIVGLVERFYD 463
                 799*************999988885 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00077
      AAA_22    5 agilvvtGesGtGKTtllrrlleqldeeakaeeerpevv..fvtlpsstsskdllrellralglelka............................. 70  
                   ++++ +G sG+GK+t++  + + +d e      + +v+   v++   +   d +++++   ++++ +                             
  EPX72912.1 1129 GQFVAFVGASGCGKSTTIGLIERFYDCE------SGSVIvgGVDVRDYN-VNDYRKQIALVSQEPTLYqgtirenivlgasrdvtdeeiiecckman 1218
                  689999***************9999765......444444555555555.66666666666666666666666666666666777777777777777 PP

      AAA_22   71 ...............erlsseell.ealeqalrarav...ielliiDEaqh.lr..s....eea 108 
                                 ++++ + l   + ++ + ara    +++l++DEa   l+  s    +ea
  EPX72912.1 1219 ihdfimglpngyetlSGQKGSSLSgGQKQRIAIARALirnPKILLLDEATSaLDsnSekvvQEA 1282
                  7777777777777776666666766777777777777778888888888887765533344444 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.83   5.7e+02      39      72 ..      30      63 ..      23      75 .. 0.79
   2 !    9.9   0.0   0.00059      0.41      18      57 ..     440     479 ..     436     486 .. 0.92
   3 ?   -2.2   0.1       2.9     2e+03      76     106 ..     588     618 ..     582     630 .. 0.64
   4 !    6.3   0.0    0.0073         5      20      57 ..    1133    1170 ..    1126    1187 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.83
  Zeta_toxin 39 elerqgnvvrldpDdlRelhPeyeeilkadpkka 72
                ++e +++vv + +D + ++ Pe +eil  +++++
  EPX72912.1 30 SVEDAEKVVDVVKDPFEQYTPEEREILYRQVNDT 63
                5667899*****************9987665554 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00059
  Zeta_toxin  18 lillgGqpGAGKselaellkdelerqgnvvrldpDdlRel 57 
                 +  l+G++G+GKs++  l+++  ++  + v ld+ dlR l
  EPX72912.1 440 ITALVGASGSGKSTIVGLVERFYDPIAGQVMLDGEDLRDL 479
                 66799********************************986 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 2.9
  Zeta_toxin  76 tqkdaselvekllqeaiengyniivegtlrs 106
                  ++ + ++v+k+l+ a   +  i++   l++
  EPX72912.1 588 LDSKSEVIVQKALDNASRSRTTIVIAHRLST 618
                 4556677778888888888887777644444 PP

  == domain 4  score: 6.3 bits;  conditional E-value: 0.0073
  Zeta_toxin   20 llgGqpGAGKselaellkdelerqgnvvrldpDdlRel 57  
                    +G++G+GKs+++ l+++  + +++ v + + d+R +
  EPX72912.1 1133 AFVGASGCGKSTTIGLIERFYDCESGSVIVGGVDVRDY 1170
                  5679***************9998888888888888877 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.0    0.0011      0.76      23      69 ..     439     480 ..     426     712 .. 0.83
   2 !    8.0   0.0    0.0029         2      25      50 ..    1131    1156 ..    1115    1224 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0011
      AAA_15  23 eeltvliGkNnsGKSsilealdlFlnnkekknkkvikiekedleife 69 
                 + +t l+G+ +sGKS+i+ + + F +         + ++ edl++ +
  EPX72912.1 439 K-ITALVGASGSGKSTIVGLVERFYDPI----AGQVMLDGEDLRDLN 480
                 5.9***************9999999866....555556666655554 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0029
      AAA_15   25 ltvliGkNnsGKSsilealdlFlnnk 50  
                  +  ++G+ ++GKS+ + +++ F + +
  EPX72912.1 1131 FVAFVGASGCGKSTTIGLIERFYDCE 1156
                  789*******************9854 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.3   0.0    0.0089       6.1      15      50 ..     420     455 ..     409     464 .. 0.82
   2 !    9.1   0.0    0.0013      0.87      15      51 ..    1111    1147 ..    1101    1160 .. 0.89

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0089
       AAA_7  15 ptvdtvrysyllelllknkkpvllvGptGtGKtvii 50 
                 pt   v +   ++ll+ ++k + lvG +G+GK++i+
  EPX72912.1 420 PTRPEVVVLENFSLLCPAGKITALVGASGSGKSTIV 455
                 666666666678899999****************98 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0013
       AAA_7   15 ptvdtvrysyllelllknkkpvllvGptGtGKtviik 51  
                  pt +++++   l+l +k ++ v +vG +G+GK+++i 
  EPX72912.1 1111 PTRKNIQVLRGLNLTVKPGQFVAFVGASGCGKSTTIG 1147
                  888889999999**********************985 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.5   0.00069      0.47      29      50 ..     434     455 ..     420     540 .. 0.83
   2 ?    4.8   0.0     0.027        19      31      48 ..    1127    1144 ..    1097    1147 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00069
      AAA_25  29 llpagelallaGapgtGKttla 50 
                 l pag++++l+Ga+g+GK+t++
  EPX72912.1 434 LCPAGKITALVGASGSGKSTIV 455
                 679*****************85 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.027
      AAA_25   31 pagelallaGapgtGKtt 48  
                    g +++++Ga+g+GK+t
  EPX72912.1 1127 KPGQFVAFVGASGCGKST 1144
                  5699*************9 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.0    0.0012      0.84      18      36 ..     437     455 ..     409     457 .. 0.73
   2 ?    6.1   0.1      0.02        14       5      36 ..    1114    1146 ..    1112    1150 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.0012
      AAA_23  18 skgltlItGpNGaGKTTil 36 
                   ++t+++G  G+GK+Ti+
  EPX72912.1 437 AGKITALVGASGSGKSTIV 455
                 568**************96 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.02
      AAA_23    5 enfrsfrdqeidFsk.gltlItGpNGaGKTTil 36  
                  +n++ +r+ ++  ++  +++++G  G+GK+T +
  EPX72912.1 1114 KNIQVLRGLNLTVKPgQFVAFVGASGCGKSTTI 1146
                  67777788888887745889***********87 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.078        54       3      27 ..     440     464 ..     438     477 .. 0.76
   2 ?    2.1   0.0      0.19   1.3e+02      29      52 ..     928     951 ..     917     983 .. 0.74
   3 !    7.4   0.0    0.0044       3.1       3      38 ..    1131    1166 ..    1129    1173 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.078
                 EEEEEESTTSSHHHHHHHHHHHHHH CS
       SRP54   3 villvGlqGaGKTttlaKLaallkk 27 
                 +++lvG  G+GK t ++ + + +  
  EPX72912.1 440 ITALVGASGSGKSTIVGLVERFYDP 464
                 689***********99977666655 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.19
                 TS-EEEEEESTSSTTHHHHHHHHH CS
       SRP54  29 gkkvllvaaDtfRaaAveQLktla 52 
                  +++l+++a  +R+aA++ ++ + 
  EPX72912.1 928 STSPLIICAGYYRVAALDRIQDNL 951
                 6789**************998654 PP

  == domain 3  score: 7.4 bits;  conditional E-value: 0.0044
                  EEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEEES CS
       SRP54    3 villvGlqGaGKTttlaKLaallkkegkkvllvaaD 38  
                   +++vG  G GK tt++ + + +  e  +v++  +D
  EPX72912.1 1131 FVAFVGASGCGKSTTIGLIERFYDCESGSVIVGGVD 1166
                  578**************9999999999888888777 PP

>> SbcCD_C  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.2     0.022        15      62      80 ..     574     592 ..     529     601 .. 0.78
   2 !    8.7   0.3    0.0029         2      31      88 ..    1239    1283 ..    1220    1285 .. 0.70

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.022
     SbcCD_C  62 palrlvfLDEAFsklDees 80 
                 +++++++LDEA s lD++s
  EPX72912.1 574 SDPKILLLDEATSALDSKS 592
                 35899***********986 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0029
     SbcCD_C   31 gtlSGGekqflaylalaaalaalyssaegrepalrlvfLDEAFsklDeesiatllell 88  
                  ++lSGG+kq    +a+a   +al++       ++++++LDEA s lD++s + + e+l
  EPX72912.1 1239 SSLSGGQKQR---IAIA---RALIR-------NPKILLLDEATSALDSNSEKVVQEAL 1283
                  5566666633...2222...22333.......489*************9988887776 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       2.6   1.8e+03     300     339 ..      29      64 ..      13      68 .. 0.74
   2 !    7.3   0.0    0.0033       2.3      28      50 ..     443     465 ..     438     610 .. 0.73
   3 ?    4.7   0.0      0.02        14      27      48 ..    1133    1154 ..    1117    1200 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 2.6
                 H.CCHHHHHHHHHHHHHHCCCCCCESGGSCEEEEEE-TT- CS
     G-alpha 300 grkndlesvlkylrnkFeeihkeksnnrrkiythftsatd 339
                 g+ +d+e+v++ +++ Fe++    ++++r+i +  ++ t+
  EPX72912.1  29 GSVEDAEKVVDVVKDPFEQY----TPEEREILYRQVNDTE 64 
                 66778888888888888888....3667777777777665 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0033
                 EEESTTSSHHHHHHHHHHHCS-- CS
     G-alpha  28 llGqseSGKsTilkqlkllykkg 50 
                 l+G+s+SGKsTi+  ++++y++ 
  EPX72912.1 443 LVGASGSGKSTIVGLVERFYDPI 465
                 89****************99887 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.02
                  EEEESTTSSHHHHHHHHHHHCS CS
     G-alpha   27 lllGqseSGKsTilkqlkllyk 48  
                   ++G+s++GKsT++  ++++y+
  EPX72912.1 1133 AFVGASGCGKSTTIGLIERFYD 1154
                  689***********99999995 PP

>> DUF87  Helicase HerA, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.1    0.0027       1.9      27      59 ..     442     472 ..     439     475 .. 0.88
   2 ?    4.2   0.1     0.057        39      27      47 ..    1133    1152 ..    1129    1163 .. 0.75

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0027
       DUF87  27 AilgsTGsGKSntvavLleellekkgatililD 59 
                 A +g +GsGKS+ v+ L+e+ + ++ a  ++lD
  EPX72912.1 442 ALVGASGSGKSTIVG-LVERFY-DPIAGQVMLD 472
                 899***********9.689999.9999988888 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.057
       DUF87   27 AilgsTGsGKSntvavLleel 47  
                  A +g +G GKS+t++++ e+ 
  EPX72912.1 1133 AFVGASGCGKSTTIGLI-ERF 1152
                  7789**********976.555 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.0      0.01         7       3      16 ..     442     455 ..     440     549 .. 0.85
   2 ?    5.6   0.1     0.024        17       2      15 ..    1132    1145 ..    1131    1153 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.01
      AAA_33   3 llvGlpGsGKstla 16 
                  lvG++GsGKst +
  EPX72912.1 442 ALVGASGSGKSTIV 455
                 589*********86 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.024
      AAA_33    2 vllvGlpGsGKstl 15  
                  v +vG++G+GKst 
  EPX72912.1 1132 VAFVGASGCGKSTT 1145
                  689*********96 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.022        15       4      23 ..     443     462 ..     441     486 .. 0.88
   2 ?   -2.0   0.0       4.7   3.3e+03      62      91 ..     571     602 ..     539     626 .. 0.71
   3 ?    4.0   0.0     0.067        46       4      25 ..    1134    1155 ..    1132    1168 .. 0.82
   4 ?   -1.7   0.0       3.8   2.6e+03      63      79 ..    1256    1273 ..    1242    1294 .. 0.70

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.022
                 EE--SSSSHHHHHHHGGGGB CS
       AAA_5   4 LvGppGtgKselaerlaaal 23 
                 LvG++G+gKs+++  + +++
  EPX72912.1 443 LVGASGSGKSTIVGLVERFY 462
                 9************9988776 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 4.7
                 ---.G-SEEEEESGGG--.HHHHHHHHHHHHS CS
       AAA_5  62 aar.egeilvlDEverae.sevlnsLlsllee 91 
                 a+   ++il+lDE + a  s+   ++++ l++
  EPX72912.1 571 AIIsDPKILLLDEATSALdSKSEVIVQKALDN 602
                 33358899999999888755555555555555 PP

  == domain 3  score: 4.0 bits;  conditional E-value: 0.067
                  EE--SSSSHHHHHHHGGGGBS- CS
       AAA_5    4 LvGppGtgKselaerlaaalnr 25  
                   vG++G+gKs+ +  + +++ +
  EPX72912.1 1134 FVGASGCGKSTTIGLIERFYDC 1155
                  69***********999998844 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 3.8
                  --G-SEEEEESGGG--.H CS
       AAA_5   63 aregeilvlDEverae.s 79  
                  +r+++il+lDE + a  s
  EPX72912.1 1256 IRNPKILLLDEATSALdS 1273
                  4599999***99987633 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.044        30       3      18 ..     443     458 ..     442     486 .. 0.80
   2 ?    6.0   0.0     0.024        17       1      29 [.    1132    1173 ..    1132    1217 .. 0.80

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.044
      AAA_18   3 ltGtpGvGKttlakeL 18 
                 l G++G+GK+t+   +
  EPX72912.1 443 LVGASGSGKSTIVGLV 458
                 89*********98776 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.024
      AAA_18    1 IlltGtpGvGKttlakeLskrl.gf.............gvnlr 29  
                  ++  G++G+GK+t    + +r   +              +n++
  EPX72912.1 1132 VAFVGASGCGKSTTIGLI-ERFyDCesgsvivggvdvrDYNVN 1173
                  5678************99.445466888888884444444444 PP

>> APS_kinase  Adenylylsulphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.0    0.0019       1.3       4      43 ..     440     478 ..     437     484 .. 0.80
   2 ?    0.3   0.0      0.86   5.9e+02       4      25 ..    1131    1152 ..    1128    1171 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0019
                 EEEEESSTTSSHHHHHHHHHHHHHHTT--EEEEEHHHHTT CS
  APS_kinase   4 vvwltGlsgsGKstianalekkLvekgisvylLdGdnvRh 43 
                 +  l G sgsGKsti   +e+   +     ++LdG+ +R 
  EPX72912.1 440 ITALVGASGSGKSTIVGLVERF-YDPIAGQVMLDGEDLRD 478
                 56689***********999965.5556667789**99994 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.86
                  EEEEESSTTSSHHHHHHHHHHH CS
  APS_kinase    4 vvwltGlsgsGKstianalekk 25  
                   v + G sg GKst    +e+ 
  EPX72912.1 1131 FVAFVGASGCGKSTTIGLIERF 1152
                  67899********987777764 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0         1   7.2e+02      46      64 ..     439     457 ..     427     468 .. 0.83
   2 ?   -2.4   0.0       5.4   3.7e+03     111     168 ..     555     612 ..     515     625 .. 0.57
   3 ?    7.7   0.0    0.0043         3      37      65 ..    1121    1149 ..    1114    1181 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 1
       Rad17  46 riLLisGPsGCgkstvvkv 64 
                 +i  + G sG gkst+v  
  EPX72912.1 439 KITALVGASGSGKSTIVGL 457
                 577899*********9965 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 5.4
       Rad17 111 eleLkdakylklqklGddlrtdkklilvedlPnkfyrds.dalrevirkylrssealpl 168
                  +++ + + +++      + +d k++l+++  +     s   +++ + ++ rs+ ++ +
  EPX72912.1 555 GFLMSGGQKQRIA-IARAIISDPKILLLDEATSALDSKSeVIVQKALDNASRSRTTIVI 612
                 3555555555555.566677778888888888877777734456666666666666444 PP

  == domain 3  score: 7.7 bits;  conditional E-value: 0.0043
       Rad17   37 advLesrkkriLLisGPsGCgkstvvkvL 65  
                     L  ++ + +   G sGCgkst++  +
  EPX72912.1 1121 GLNLTVKPGQFVAFVGASGCGKSTTIGLI 1149
                  556777888899999**********9766 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   1.4      0.19   1.3e+02       3      17 ..     442     456 ..     440     554 .. 0.89
   2 ?    7.6   0.2     0.006       4.1       2      19 ..    1132    1149 ..    1131    1164 .. 0.85

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.19
      AAA_28   3 vitGgestGKTtlle 17 
                 +++G++++GK+t++ 
  EPX72912.1 442 ALVGASGSGKSTIVG 456
                 689999999999975 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.006
      AAA_28    2 ivitGgestGKTtlleaL 19  
                  ++++G++++GK+t++  +
  EPX72912.1 1132 VAFVGASGCGKSTTIGLI 1149
                  89***********99765 PP

>> DPM3  Dolichol-phosphate mannosyltransferase subunit 3 (DPM3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.1       6.5   4.5e+03      31      59 ..     126     154 ..     107     157 .. 0.79
   2 ?    9.4   0.1    0.0017       1.2      39      79 ..     348     388 ..     307     390 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 6.5
        DPM3  31 skvqdevvpvlPlwalvlfGayslatlgy 59 
                 ++ ++++v+++ ++a+ +fG+  ++t+ +
  EPX72912.1 126 QHDVNHFVLYFIYIAVGIFGCSYVYTVTF 154
                 56677888999999999999998888865 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.0017
        DPM3  39 pvlPlwalvlfGayslatlgygvltfndcpeaakeLqkeik 79 
                  +++ ++ vl+++ysla++  ++  f +c +aak++ + i+
  EPX72912.1 348 KMISCFFAVLIASYSLANISPKMPAFVNCSSAAKKIFDTID 388
                 56778899***************************998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1344 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1037  (0.0578393); expected 358.6 (0.02)
Passed bias filter:                      658  (0.0367003); expected 358.6 (0.02)
Passed Vit filter:                        87  (0.00485247); expected 17.9 (0.001)
Passed Fwd filter:                        28  (0.00156172); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              26  [number of targets reported over threshold]
# CPU time: 1.04u 0.31s 00:00:01.35 Elapsed: 00:00:00.49
# Mc/sec: 8240.93
//
Query:       EPX72913.1  [L=3001]
Description: vacuolar protein sorting-associated protein 13b [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      1e-64  218.6   0.6    5.5e-62  209.6   0.3    4.2  5  SHR-BD         SHR-binding domain of vacuolar-sorting associa
    3.6e-59  199.5   8.4    6.2e-58  195.5   2.0    4.2  3  VPS13_C        Vacuolar-sorting-associated 13 protein C-termi
    2.1e-51  175.0   6.7    2.4e-46  158.5   0.1    4.6  5  VPS13          Vacuolar sorting-associated protein 13, N-term
    2.8e-35  121.8  16.3    6.4e-33  114.1   3.3    6.3  7  VPS13_mid_rpt  Repeating coiled region of VPS13
    5.2e-35  120.1   3.7    1.9e-34  118.2   0.5    3.3  3  Chorein_N      N-terminal region of Chorein or VPS13
    0.00031   21.0   0.0     0.0011   19.3   0.0    1.9  1  ATG_C          Autophagy-related protein C terminal domain


Domain annotation for each model (and alignments):
>> SHR-BD  SHR-binding domain of vacuolar-sorting associated protein 13
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.1   3.4e+03     120     165 ..    1205    1250 ..    1205    1278 .. 0.84
   2 ?   -3.5   0.0       1.8   5.4e+03       8      27 ..    1745    1764 ..    1745    1809 .. 0.70
   3 ?    2.7   0.0     0.023        68       3      35 ..    1854    1886 ..    1852    1901 .. 0.77
   4 ?    0.3   0.0      0.12   3.7e+02     115     168 ..    1972    2029 ..    1968    2043 .. 0.79
   5 !  209.6   0.3   1.8e-65   5.5e-62       3     270 ..    2082    2357 ..    2080    2358 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.1
      SHR-BD  120 ilkNklsekleiaqrgskkvielkpgeliplhwlrnkeekelvirl 165 
                  i+ N ++++++i  + s+ + +l++ ++ ++ +l  ++ k l+i+ 
  EPX72913.1 1205 IVGNLTNYDIRIDGETSDFSFQLSQAQYYTFLQLAYEAPKALSIKD 1250
                  67899**********999999**********999999999999964 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 1.8
      SHR-BD    8 pywllNkTglpLevrqedns 27  
                  py +lN+Tg++L+v    + 
  EPX72913.1 1745 PYEVLNETGYSLSVHYGHKG 1764
                  78899999999988754443 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.023
      SHR-BD    3 isIyapywllNkTglpLevrqednsneaagqle 35  
                  i +++py l+N+T+  +e+  +d   + ++++ 
  EPX72913.1 1854 IILSSPYSLVNRTKEAIEFVCNDRAGHRQSSVV 1886
                  678899999999999999988888777777665 PP

  == domain 4  score: 0.3 bits;  conditional E-value: 0.12
      SHR-BD  115 iaPRyilkNklsekleiaqrgs...kkv.ielkpgeliplhwlrnkeekelvirlpes 168 
                  i P  +++N l+++++++  ++   +++ ++lkpg++ p+  +++k+   l i++pe+
  EPX72913.1 1972 ILPPLQVHNFLPYEVKVRILEKntrNDWrCSLKPGDSLPILHMDSKSLLLLGISIPEI 2029
                  6677899*****998877666543655546**********999888888888888876 PP

  == domain 5  score: 209.6 bits;  conditional E-value: 1.8e-65
      SHR-BD    3 isIyapywllNkTglpLevrqednsneaagqleeeeearsltpllfSfddrdtknraqlrignskwskpfsldaigetnevelrsaekesevyiGis 99  
                  ++Iy+py++ N+T++++++++++    ++          +++p++fSf+++++knra lr+++s   +p+sld+ig+++ev+++ +++++ + +G+s
  EPX72913.1 2082 VKIYSPYLVYNRTDIDMQLSDDNDYSVSNIIRG-GGYTSDISPYFFSFKQENRKNRAVLRMRDSRLFQPLSLDTIGSSSEVQVETKDDRKAYILGVS 2177
                  89******************9887555555444.56999*************************************************87677**** PP

      SHR-BD  100 veegrgkykltkiVtiaPRyilkNklsekleiaqrgskkvielkpgeliplhwlrnkeekelvirlpesnsqwSggfnisdvgslyvklrrq....n 192 
                  + e+ gk++l+k+Vt++PRy+++N+++ +l ++q gs++v +lkp++l p+ ++ n+e+      +p+ n++wS++f+ +++g +++k+++q    n
  EPX72913.1 2178 IGECTGKFCLSKTVTFTPRYVFRNNMDRPLCLRQFGSSHVWNLKPKALYPVCLFVNSEDITTIAAFPGTNNSWSSAFYMNNLGITHIKVYEQnengN 2274
                  *******************************************************************************************866667 PP

      SHR-BD  193 seqvllkveiiledatifikiedaeknewPfsirNeseveilfyqrdpelnsd......eskplkytlppksvmpYawDePtak 270 
                     vll++ + l+da++fi +  ++   wPf+++N s+ +il++q++p+  s       ++k+ ky l++ ++  Y wD+P+ k
  EPX72913.1 2275 VLPVLLRISVSLKDASFFIVFDLETVA-WPFKLKNTSSMDILYQQKKPDPLSSesmytqHFKKSKYVLQAGEEADYCWDFPSLK 2357
                  7789*********************99.******************999888889**************************975 PP

>> VPS13_C  Vacuolar-sorting-associated 13 protein C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.1       0.1   3.1e+02      17      72 ..     947    1007 ..     936    1019 .. 0.67
   2 !  195.5   2.0   2.1e-61   6.2e-58       1     177 [.    2596    2772 ..    2596    2773 .. 0.96
   3 ?    3.4   0.0     0.019        56     129     165 ..    2820    2856 ..    2794    2861 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.1
     VPS13_C   17 sfslsekknkeesleke......qsllslllllnslgvtlt.niddapikLnalelenvflsl 72  
                  sf +s+++ ++ +++++      ++ ++++  +++lg++l  + ++ pi Ln ++ ++ f++ 
  EPX72913.1  947 SFGMSNNNADTVAKKETssevsgKTNVTFT--VHNLGLELFeSYEQHPICLNIFNFHSNFDTA 1007
                  555555544444333335667555555555..99999988526899*********99988874 PP

  == domain 2  score: 195.5 bits;  conditional E-value: 2.1e-61
     VPS13_C    1 kiYfeklhlqPiklhlsfslsekknkeesleke.qsllslllllnslgvtltniddapikLnalelenvflslesliekikkhYsqqllkqlykilg 96  
                  +++fe lhlqP+ ++l+f+ s + +++  + ++ +s+l+++  +  l+ tl+ni+dap++Ln+  len++ + ++l++ki++hY+qq+ +q+y+i+g
  EPX72913.1 2596 DVFFEALHLQPTIFNLTFEASGDIENQIIKVRTpNSTLDFM--TGLLMNTLGNIHDAPVQLNSVLLENARGTVSELVSKIITHYKQQIGYQMYMIAG 2690
                  58*********************999987666668888888..999999************************************************ PP

     VPS13_C   97 sldvlGNPvglfnnissGvkdlfyePiqglvkg.peefgeglakGaksLvkktvfGvadsvskitgsvskglaaltmDeeYq 177 
                   +d+lGNPvglfnn++sGv d+fyeP+qg++ +  +++g +la+G++s+++kt+fGv+dsvsk+t ++skgl+++tmD +Y+
  EPX72913.1 2691 RADFLGNPVGLFNNFASGVFDMFYEPYQGFLLQdTQSIGDSLARGTSSFMRKTIFGVSDSVSKLTSTFSKGLSTMTMDPKYK 2772
                  ******************************9988***********************************************6 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.019
     VPS13_C  129 gpeefgeglakGaksLvkktvfGvadsvskitgsvsk 165 
                  +p +f++g+ kG+  L++k   G+ d ++++++ + +
  EPX72913.1 2820 SPGKFLKGFGKGVLGLATKPAIGFLDMTTNVSEGIRN 2856
                  4999***********************9999887765 PP

>> VPS13  Vacuolar sorting-associated protein 13, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.5   0.1   7.9e-50   2.4e-46       1     235 [.     136     362 ..     136     363 .. 0.94
   2 !   12.5   0.2   3.1e-05     0.092     114     176 ..     704     775 ..     614     783 .. 0.74
   3 ?   -0.5   0.1       0.3     9e+02     127     183 ..    1045    1102 ..     998    1111 .. 0.86
   4 ?    3.4   0.0     0.019        57     120     168 ..    1189    1239 ..    1154    1246 .. 0.76
   5 ?   -4.2   0.0       4.1   1.2e+04     135     164 ..    2429    2458 ..    2424    2460 .. 0.77

  Alignments for each domain:
  == domain 1  score: 158.5 bits;  conditional E-value: 7.9e-50
       VPS13   1 FlesLiakIldNlqvtiknvHiryeDslsvpgrpfalGitLesLsaqstdenwkptfikgeeseekivyKlvelesLavYwdsdssedksledlsleel 99 
                 F+esL+++++dN+q++i+++Hir+e s +++++ +++G+ L+++s++s+++ wkp fi++   e+k+++Kl++l++LavY d+ s   + +++ +l+++
  EPX72913.1 136 FTESLVTRMIDNIQINIQDIHIRFEHSNENHDSGYSFGLLLSEFSISSCNDMWKPMFIET---ESKTIHKLCSLKKLAVYSDETS---ECISSNDLNDM 228
                 99***********************9988888**************************99...99*****************866...45778899999 PP

       VPS13 100 eeafessikeksekakrhqYiLkPvsgeaklklnkkgetdapklkldleldevgltLseeqyrdilklleslsrlerreeyrklrPkvsvkenpraWWk 198
                    f+  +++ ++  ++++++++P+ g+ak+++nk+++ ++p++  dl ++ ++lt+s+++++  ++l ++++ +  + ++r+         +++ ++ 
  EPX72913.1 229 IGLFHVLLTNFDQ--REKEFLISPIMGSAKVTINKTTTPEKPRFVTDLSFEGFDLTVSDDHLARGISLNNEFNKIISKTNFRRNVIGDAAISKSSDYLP 325
                 9999999987774..6789****************99999*******************************************988777777899**** PP

       VPS13 199 YaikavleeirekrrkwsweaiaerrdlrkrYvelyk 235
                 + +k +l++irek++  sw+ai+ ++++rk+Y++ly+
  EPX72913.1 326 FVFKNILNDIREKNYIKSWPAIKGFCERRKAYIHLYR 362
                 ***************88*******************8 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 3.1e-05
       VPS13 114 a........krhqY.iLkPvsgeaklklnkkgetdapklkldleldevgltLseeqyrdilklleslsrler 176
                 +         + +Y +Lk  s ++++++++  + + pk++++ e++++ +++s++qy  +++l +++ + e 
  EPX72913.1 704 ScihddrleMNEKYqLLKESSINLNVSIQSVPSPNFPKIRVSGEMSDLLFKISDAQYSILNNLKSTFLSNES 775
                 0444444443334449*************999999****************************999987665 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.3
       VPS13  127 eaklklnkkgetd.apklkldleldevgltLseeqyrdilklleslsrlerreeyrkl 183 
                  ++++k+++ +++d  p+ kl++++ ++ +  +++ + dil++++ + ++++  e +k+
  EPX72913.1 1045 DLHYKMQQAENKDsYPEAKLNIKMGSFLMICRRQPIVDILNFFSDFIQMKTVVESAKY 1102
                  678889977777746***************************9999888877666665 PP

  == domain 4  score: 3.4 bits;  conditional E-value: 0.019
       VPS13  120 iLkPvsgeaklklnkkgetd..apklkldleldevgltLseeqyrdilkll 168 
                  +Lk +++ +k+++ ++   +  +  +++d e+++++++Ls++qy ++l+l+
  EPX72913.1 1189 VLKNLNVGLKISVLQEIVGNltNYDIRIDGETSDFSFQLSQAQYYTFLQLA 1239
                  677777777776665555554456778888899***************997 PP

  == domain 5  score: -4.2 bits;  conditional E-value: 4.1
       VPS13  135 kgetdapklkldleldevgltLseeqyrdi 164 
                  ++++++ ++k++++l+ vgl+L + q++++
  EPX72913.1 2429 EEDKNETEFKFAMDLSGVGLSLINGQCEEF 2458
                  3334468899999***********999875 PP

>> VPS13_mid_rpt  Repeating coiled region of VPS13
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.7     5e+03     136     167 ..     134     165 ..     114     173 .. 0.71
   2 !  114.1   3.3   2.1e-36   6.4e-33      12     230 ..     561     767 ..     550     771 .. 0.90
   3 ?    2.2   0.0     0.034     1e+02      80     126 ..     816     863 ..     811     879 .. 0.78
   4 ?    1.4   0.0     0.059   1.8e+02      72      98 ..    1110    1136 ..    1057    1145 .. 0.77
   5 !    4.5   0.0    0.0069        21     178     230 ..    1186    1239 ..    1161    1243 .. 0.74
   6 ?    2.8   0.0     0.022        65      81     125 ..    1449    1493 ..    1438    1504 .. 0.73
   7 ?   -3.5   0.0       1.8   5.5e+03     100     149 ..    2916    2962 ..    2913    2967 .. 0.77

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.7
  VPS13_mid_rpt 136 eed.leeleelmYDkfslklsdtqvllgdsged 167
                    + + +e+l  +m D+ +++++d+ + + +s+e+
     EPX72913.1 134 Q-TfTESLVTRMIDNIQINIQDIHIRFEHSNEN 165
                    2.2477888888888888888888888777776 PP

  == domain 2  score: 114.1 bits;  conditional E-value: 2.1e-36
  VPS13_mid_rpt  12 qrlsiklrpleiiYdaetveevvkffkppksvlesvealssaasstleelkeqtragleyaleehktldlkidlqapliiiPesiteeessllvlD 107
                      l+++lr+le + d+ ++ +v k+f  +   +e   +l   a s + +l++qt + l+  ++e+ +l l+++lqaplii+Pe++++++++ lv+D
     EPX72913.1 561 DILKLNLRTLEFFHDQPCLIKVKKLFDDSLFTNEGGAQLLRFANSAVTDLTSQTIHNLRNYINEKRKLILDVQLQAPLIILPENVENQNTESLVID 656
                    5689******************************99************************************************************ PP

  VPS13_mid_rpt 108 lGhlsveselvdksaikeikskskqqyseedleeleelmYDkfslklsdtqvllgdsgedwkealsedssklhilepinlkltleksivpkalnlp 203
                     G +sv++++ d++     k+ +k+     + ee+++l+YD + l+l+++++ lg+      + l+ + +k+++l++ +++l++++  vp  +n+p
     EPX72913.1 657 SGLISVKTSSSDHN-----KEGQKT-----KEEEIQSLIYDDYVLTLESAEISLGPLSCIHDDRLEMN-EKYQLLKESSINLNVSIQSVPS-PNFP 740
                    ********433322.....222222.....2479*********************9999988999977.89*******************8.**** PP

  VPS13_mid_rpt 204 kfkvsgelpslevnlsdkkykslmeli 230
                    k++vsge+ +l +++sd++y  l +l 
     EPX72913.1 741 KIRVSGEMSDLLFKISDAQYSILNNLK 767
                    ********************9998875 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.034
  VPS13_mid_rpt  80 dlkidlqap.liiiPesiteeessllvlDlGhlsveselvdksaikei 126
                    +++++l+   ++++ es ++++s+++ l+lG+l+v+ ++ d+++ +e+
     EPX72913.1 816 EFDMSLKGMnIVLMRESGHSQRSPMVSLELGQLNVSYNQYDTEQKAEL 863
                    6677777650556667*******************9987777766554 PP

  == domain 4  score: 1.4 bits;  conditional E-value: 0.059
  VPS13_mid_rpt   72 aleehktldlkidlqapliiiPesite 98  
                       e+ + +d+ i++ +p++ iP s+++
     EPX72913.1 1110 QAEQGTNFDISISISNPIFRIPLSLNN 1136
                     45788999**************98765 PP

  == domain 5  score: 4.5 bits;  conditional E-value: 0.0069
  VPS13_mid_rpt  178 klhilepin..lkltleksivpkalnlpkfkvsgelpslevnlsdkkykslmeli 230 
                     +l +l+++n  lk+++ + iv + +    ++++ge  +++++ls ++y ++++l 
     EPX72913.1 1186 ELDVLKNLNvgLKISVLQEIVGNLT-NYDIRIDGETSDFSFQLSQAQYYTFLQLA 1239
                     4667776651145555566777644.4479**********************997 PP

  == domain 6  score: 2.8 bits;  conditional E-value: 0.022
  VPS13_mid_rpt   81 lkidl.qapliiiPesiteeessllvlDlGhlsveselvdksaike 125 
                     l+ d+ q +l+++  + ++++s++l+  +Gh+s+  +     +i++
     EPX72913.1 1449 LRFDVtQTSLVFV-ADASNSNSQCLIARIGHVSLARQMSYSLTIQD 1493
                     5555514455555.556677**************997776666665 PP

  == domain 7  score: -3.5 bits;  conditional E-value: 1.8
  VPS13_mid_rpt  100 essllvlDlGhlsveselvdksaikeikskskqqyseedleeleelmYDk 149 
                     ++++l +   h+ ++++  + +++ ++++ ++  +se++      +mYD 
     EPX72913.1 2916 DERILFISTKHFIITTSNNEVETVTSVRKVKNVRFSEDE---FVCSMYDM 2962
                     6788999999999*9999999999999999888887775...44566665 PP

>> Chorein_N  N-terminal region of Chorein or VPS13
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.2   0.5   6.4e-38   1.9e-34       1     115 [.       2     115 ..       2     116 .. 0.93
   2 ?   -2.4   0.0       1.7   4.9e+03      76      94 ..     147     165 ..     142     169 .. 0.78
   3 ?    0.3   0.0      0.24   7.2e+02      16      49 ..    2579    2613 ..    2574    2627 .. 0.82

  Alignments for each domain:
  == domain 1  score: 118.2 bits;  conditional E-value: 6.4e-38
   Chorein_N   1 leslvskllnryLgeyvenldrdqlkvslwsGeveLenlkLkkealdklelPfevkegvigklrlkipwsnlkskpvvieiedvyllaeprseseeede 99 
                 le+l++++lnr+Lgey+en+d+ qlkv++w+G+v+L+nl+Lk++al+klelP++v++g +++l+lkipws+l++kpv+i+ie++  la  +++  + ++
  EPX72913.1   2 LEGLLANFLNRLLGEYIENFDATQLKVGVWNGDVTLQNLQLKRDALKKLELPISVQYGLLESLKLKIPWSSLRNKPVEIYIEGIRALAAMDESP-TISK 99 
                 799*************************************************************************************665555.6677 PP

   Chorein_N 100 ekeekreqaakkkkLa 115
                  ++ +++ +ak+++++
  EPX72913.1 100 TEDLSQQLEAKRREME 115
                 7699999999998875 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.7
   Chorein_N  76 pvvieiedvyllaeprses 94 
                 +++i+i+d+++  e ++e+
  EPX72913.1 147 NIQINIQDIHIRFEHSNEN 165
                 689********99766655 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 0.24
   Chorein_N   16 yvenldrdqlkvslwsGeveLenlkLkkealdk.l 49  
                  + ++++  +++v++++ +v  e l+L++++++  +
  EPX72913.1 2579 FNDKFELPNFDVDVYQNDVFFEALHLQPTIFNLtF 2613
                  557788889*********************98744 PP

>> ATG_C  Autophagy-related protein C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   3.6e-07    0.0011       5      88 ..    2781    2863 ..    2777    2868 .. 0.89

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 3.6e-07
       ATG_C    5 asqPedlreGlqqAysslskglksaaqtilavpsevaeskgakgavkavvravPvavlrPligateavsktlqGvrnqldpear 88  
                   ++P+    G++ + +++ + ++s  + +   p   ++s+++++++k+  + v  +  +P+ig  ++++++  G+rn+ d  a 
  EPX72913.1 2781 RNRPKKAAFGVTVGANTFYDSMTSGFEGLR-RPFTDRKSDSPGKFLKGFGKGVLGLATKPAIGFLDMTTNVSEGIRNSTDVRAN 2863
                  689999999999999999999999999975.67777899***************************************997765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (3001 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       579  (0.032294); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.27u 0.30s 00:00:01.57 Elapsed: 00:00:00.49
# Mc/sec: 18422.65
//
Query:       EPX72914.1  [L=133]
Description: sporulation specific protein Spo2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
       0.33   10.7   2.7        1.2    8.9   0.1    2.6  2  Ribosomal_S21  Ribosomal protein S21


Domain annotation for each model (and alignments):
>> Ribosomal_S21  Ribosomal protein S21
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.3     0.016     3e+02       9      41 ..      12      45 ..      11      60 .. 0.55
   2 ?    8.9   0.1   6.6e-05       1.2      32      52 ..     101     121 ..      75     123 .. 0.83

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.016
  Ribosomal_S21  9 nierALkrfkrkveragvirevr.rrryyekpse 41
                   + e+ ++rf+  + +   +  +  +++ y    e
     EPX72914.1 12 DEENIFRRFEQLLVSYEKLTLMAaEQEEYNSQME 45
                   5678888888766554444444434445544444 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 6.6e-05
  Ribosomal_S21  32 rrryyekpsekrkrkkkearr 52 
                     ++ ye+ s++ +r+kk+  +
     EPX72914.1 101 DQQAYENASVENVRLKKKLEK 121
                    699**************9886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1044  (0.0582297); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.30s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 872.92
//
Query:       EPX72915.1  [L=491]
Description: lysine methyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-06   28.0   0.0    6.1e-06   26.7   0.0    1.7  2  SET       SET domain


Domain annotation for each model (and alignments):
>> SET  SET domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   0.0   3.4e-10   6.1e-06       1     169 []      36     267 ..      36     267 .. 0.75
   2 ?   -2.9   0.0      0.45     8e+03      53      63 ..     398     408 ..     321     454 .. 0.54

  Alignments for each domain:
  == domain 1  score: 26.7 bits;  conditional E-value: 3.4e-10
                 SCEEEESSXBXTTXEEEEEEECCEECHHHHHHHHHH...............................................HTEEEEEXG..GXX.G CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...............................................xxxxxxxxx..xxx.x RF
         SET   1 GrGvfAtedIpkgeficeypeeiiltkdeadksele...............................................aylfslpea..pkn.l 49 
                 GrG+++++ I + e++ +++++ +l++ ++  s l                                                +yl++l+e   p + l
  EPX72915.1  36 GRGIVSSQTISPPEVLASFDKSFVLSPKNSYFSPLLstlcydagvsgktkthsyatqsdhlanvrltlalllekslgensfwkPYLDTLDEVviPDSiL 134
                 9****************999888888877777777788888888889*******************************************887666656 PP

                 GSXHHHHHHHTTSSHHHHHHHHHHHHHHHHHHTHHHHHHHXTTTSXXXHCCCCC...HCCCHEE..EETEEEEEECCC....GTTGGGCEEXSSSSEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxx..xxxxxxxxxxxx....xxxxxxxxxxxxxxxxx RF
         SET  50 aftkelakasastllqklakdqkqaekedtdaalkasskaesdlnaskpeagaf...saiagys..idaralksgnga....gplarflNHsCdpNcnl 139
                  ++++++ ++++t +++++ +  +  +++++  +  + k++++l+     + ++    +    +   ++r+++ ++++    +p+++++NH  +p + +
  EPX72915.1 135 LWDDDRNRLKGTTVYENSN-NVLKIYYDQYKELVLPFFKKFKSLP----ISCPSwlkYLQT--CilTQSRCFYIDDYHqlslVPFVDIFNHQSNPEV-A 225
                 6654444444444444433.3334444555555555555555552....222222222222..22356788888888888889************99.6 PP

                 EEEEE............TTSSEEEEEESSXBXTTEEEEEXTT CS
                 xxxxx............xxxxxxxxxxxxxxxxxxxxxxxxx RF
         SET 140 tvqnv............lrgprvavfAtrdIkkGeEltidYg 169
                 ++q              ++  r  +     I++G E++++ g
  EPX72915.1 226 FLQCSnftgdspgddepTDYSRCNFLLNAVIQQGYEIFNCFG 267
                 66666799999*****999999****************9876 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.45
                 HHHHHHHTTSS CS
                 xxxxxxxxxxx RF
         SET  53 kelakasastl 63 
                 + + + +++++
  EPX72915.1 398 MSAKEPKLEQE 408
                 33333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (491 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       535  (0.0298399); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.45
# Mc/sec: 3248.25
//
Query:       EPX72916.1  [L=349]
Description: DUF544 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.8e-08   34.4   0.0    3.4e-08   33.5   0.0    1.5  1  MINDY_DUB  MINDY deubiquitinase
  ------ inclusion threshold ------
        0.3   11.7   1.9       0.96   10.1   1.9    1.9  1  LAMTOR     Late endosomal/lysosomal adaptor and MAPK and MTOR


Domain annotation for each model (and alignments):
>> MINDY_DUB  MINDY deubiquitinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.5   0.0   3.8e-12   3.4e-08       1     108 [.      44     152 ..      44     161 .. 0.76

  Alignments for each domain:
  == domain 1  score: 33.5 bits;  conditional E-value: 3.8e-12
   MINDY_DUB   1 vNvLlLsgk....iellpedreevsleeLlelladilldnnplnqeenlsellelLpklqtgldvnprFdgidsFektselalFdllnipLvHGwlvdp 95 
                 vN L+L+ +     +l  ++++++  ee+ ++l + + + +     e+++el   L +++ g ++np+  +i++F++ +e  +F++++ipLvHGwl+++
  EPX72916.1  44 VNSLVLKSNnersFSL--PNKRHIASEEVNDYLIQFAKRYAL---CEDYDELHGRLSTMHFGQQLNPSILDIQKFDYGDE--IFKVFGIPLVHGWLFSS 135
                 6888888886655555..677788888888887777666655...578999**************************997..8*************997 PP

   MINDY_DUB  96 q....daeaaealsaks 108
                 +    d++  + l++ +
  EPX72916.1 136 EimpdDPSSLKCLQELE 152
                 43333555555555544 PP

>> LAMTOR  Late endosomal/lysosomal adaptor and MAPK and MTOR activator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   1.9   0.00011      0.96      11      45 ..     310     345 ..     303     348 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00011
      LAMTOR  11 qnnsg.nysrgydnslqqqeqespekltdeqeaLnk 45 
                 q++s  ++++gy++ +++  ++  +k+++++++L++
  EPX72916.1 310 QRQSRsGQNTGYSQTAHRPRNNKTPKKKQDEQQLKS 345
                 33333569***********************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (349 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       850  (0.0474092); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.45
# Mc/sec: 2308.77
//
Query:       EPX72917.1  [L=428]
Description: WDR21 family WD repeat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00073   20.3   4.2       0.24   12.3   0.0    4.2  6  WD40      WD domain, G-beta repeat
  ------ inclusion threshold ------
      0.038   13.6   0.5       0.15   11.6   0.0    2.2  2  DUF4221   Domain of unknown function (DUF4221)


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1         1   9.2e+03      19      36 ..     127     145 ..     113     147 .. 0.67
   2 ?   -3.6   0.0         2   1.8e+04      10      26 ..     225     237 ..     218     242 .. 0.58
   3 !    6.4   0.0     0.002        18      13      38 .]     265     286 ..     252     286 .. 0.77
   4 ?   -1.9   0.0      0.85   7.6e+03       9      28 ..     298     320 ..     292     324 .. 0.70
   5 !   12.3   0.0   2.7e-05      0.24       3      38 .]     341     380 ..     339     380 .. 0.72
   6 ?   -3.2   0.0         2   1.8e+04      19      25 ..     401     407 ..     399     409 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 1
                 ETTSSEEEEE..ETTSEEEE CS
        WD40  19 spdgawlasG..sdDgtvri 36 
                 s+ g++++s+  s D+ +++
  EPX72917.1 127 SSRGDLFVSSlnS-DNDLYL 145
                 5556677776655.776655 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 2
                 S.SS.EEEEEEETTSSEEE CS
        WD40  10 H.ss.vtslafspdgawla 26 
                 H s  ++++       + +
  EPX72917.1 225 HcSEfINGI------GFAV 237
                 643368888......5544 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.002
                 EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  13 vtslafspdgawlasGsdDgtvriWd 38 
                  t++    d++ la+G+++++v ++d
  EPX72917.1 265 LTAV----DQNILAAGCRNKSVLLYD 286
                 6788....999************998 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 0.85
                 SS.SSE..EEEEEETTSSEEEEE CS
        WD40   9 GH.ssv..tslafspdgawlasG 28 
                 +H  sv  t+l  s + ++l+sG
  EPX72917.1 298 AHdASVcsTALVDSAEPKLLVSG 320
                 68666855666678888888877 PP

  == domain 5  score: 12.3 bits;  conditional E-value: 2.7e-05
                 EEEEEESSSS.E.EEEE..EETTSSEE.EEEETTSEEEEEE CS
        WD40   3 clrtltGHss.v.tsla..fspdgawl.asGsdDgtvriWd 38 
                 +l ++ GHs+ + + la   +  g+++ a ++dD +vr+W+
  EPX72917.1 341 HLMSYAGHSNlIeRNLAfmCNEKGTLFgA-AGDDSHVRFWN 380
                 678999**556999997655555555544.456*******8 PP

  == domain 6  score: -3.2 bits;  conditional E-value: 2
                 ETTSSEE CS
        WD40  19 spdgawl 25 
                 +pdg+w+
  EPX72917.1 401 QPDGTWI 407
                 69****6 PP

>> DUF4221  Domain of unknown function (DUF4221)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   1.7e-05      0.15     285     304 ..      10      30 ..       9      43 .. 0.77
   2 ?   -1.0   0.1      0.11   9.9e+02     219     242 ..     125     148 ..     112     215 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 1.7e-05
                 EEEEETTTTEEEEEEE---.- CS
     DUF4221 285 kllyDksrkvyyRfarkkl.e 304
                 +++yD+ r++y+R+a++ +  
  EPX72917.1  10 GFYYDSTRNRYFRIASQGIsT 30 
                 58**************97733 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.11
                 EET.TTTEEEEEETT-SEEEEESS CS
     DUF4221 219 ytledngqliisfsgsnslyvtds 242
                 + +++++ ++ s+  +n+ly  d 
  EPX72917.1 125 FSSSRGDLFVSSLNSDNDLYLHDA 148
                 455678888889999999998663 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (428 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       769  (0.0428914); expected 358.6 (0.02)
Passed bias filter:                      574  (0.0320152); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.35s 00:00:01.00 Elapsed: 00:00:00.53
# Mc/sec: 2434.41
//
Query:       EPX72918.1  [L=948]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-06   26.7   0.3    0.00019   20.5   0.2    2.2  1  Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping prot


Domain annotation for each model (and alignments):
>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.2   1.1e-08   0.00019      18     226 ..     237     420 ..     226     429 .. 0.78

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 1.1e-08
    Ge1_WD40  18 kyyvGqLvavhregkylayaikvkntgeglvrvvnketeeraLlkglkgevldlafah..vsskillavdekgslfvykveeveskllvslllkveapi 114
                 +y++  L    ++++y+ay  +  n     v v n++t +r +l + +++v+ l f      ++ lla + +g+  v+k+++  ++l +sl+l +++  
  EPX72918.1 237 NYFYEPLALADKKNQYAAYVNQNLN----QVCVSNVDTMQRCIL-DCENQVVYLGFGEdsFANVYLLATNCEGKASVWKISDGANNLSTSLVLSIKH-- 328
                 5666777777888999999766665....7999********977.89*********86225688999****************************98.. PP

    Ge1_WD40 115 etvvsesdrviWCPyipeedaeesdddeaskllvltrgdkaeiwsvdmiaskygsgelsveei.eegllkieehsliveaafspdGtalatasedGevk 212
                        + +  C +++ +++          l+ ++ ++k  + +v+      +s ++ ++e+ e++ll +e  s+i + ++s d t+la    d +v 
  EPX72918.1 329 -------SLLRDCTWVSGDSN----------LVGVLVKNKYYVIQVSLN---QKSVKIGPSELfENSLLMVEAPSTINSCSLSKDKTVLALL-VDSKVY 406
                 .......33445778887763..........555555667666666554...4555666665416799999999****************85.79**** PP

    Ge1_WD40 213 ffqvyledeeeprC 226
                 ++qv l+ +++   
  EPX72918.1 407 LYQVTLSANTNTEK 420
                 ******98877654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (948 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       708  (0.0394891); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.81u 0.33s 00:00:01.14 Elapsed: 00:00:00.51
# Mc/sec: 5621.03
//
Query:       EPX72919.1  [L=61]
Description: non-classical export protein 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.7e-21   73.4   0.1      1e-20   73.1   0.1    1.1  1  NCE101    Non-classical export protein 1


Domain annotation for each model (and alignments):
>> NCE101  Non-classical export protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.1   0.1   5.7e-25     1e-20       1      44 [.       5      48 ..       5      49 .. 0.99

  Alignments for each domain:
  == domain 1  score: 73.1 bits;  conditional E-value: 5.7e-25
      NCE101  1 YLlsrflDPlLaifiGvaaYylyEkrterpeghrLneLlkkkyn 44
                YL+s+ +DPl++++iG+++Yyl+Ek++ rp+g+ L+eLl+k++n
  EPX72919.1  5 YLISKLMDPLFGMAIGIYGYYLFEKEHPRPQGKGLQELLMKRWN 48
                9******************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (61 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       285  (0.015896); expected 358.6 (0.02)
Passed bias filter:                      266  (0.0148363); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.29s 00:00:00.76 Elapsed: 00:00:00.48
# Mc/sec: 383.78
//
Query:       EPX72920.1  [L=217]
Description: ribosomal protein subunit L16 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.9e-36  122.6   1.0    4.2e-19   69.0   0.3    2.1  2  Ribosomal_L6  Ribosomal protein L6


Domain annotation for each model (and alignments):
>> Ribosomal_L6  Ribosomal protein L6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.4   0.0   3.7e-18   6.6e-14       2      75 ..      46     120 ..      45     121 .. 0.97
   2 !   69.0   0.3   2.3e-23   4.2e-19       1      73 [.     129     201 ..     129     203 .. 0.98

  Alignments for each domain:
  == domain 1  score: 52.4 bits;  conditional E-value: 3.7e-18
                   STTEEEEEETTTEEEEEESSEEEEEE-CTTSEEEEEECSTEEEEEECSESCHHHH....HHHHHHHHHHHHHHHHHHT CS
  Ribosomal_L6   2 PvgvrvsikggqlvlvlGpkgeltreipegvtvevkvegnkvtvivvsgidkekv....AligtvrslinnmikGVte 75 
                   P++v++++ + q++ v Gp+g+l +++p+ + ++  +e+++++ ++ s ++ e +    A++gt+r+l  n +kGVte
    EPX72920.1  46 PKDVQIQLRK-QVLEVSGPNGQLQQNFPKYLRLK--QENDSIRIEIASKSKDELSkkqlAMWGTTRALLGNNVKGVTE 120
                   9********5.*******************9999..****************************************97 PP

  == domain 2  score: 69.0 bits;  conditional E-value: 2.3e-23
                   CSTTEEEEEETTTEEEEEESSEEEEEE-CTTSEEEEEECSTEEEEEECSESCHHHH....HHHHHHHHHHHHHHHHH CS
  Ribosomal_L6   1 iPvgvrvsikggqlvlvlGpkgeltreipegvtvevkvegnkvtvivvsgidkekv....AligtvrslinnmikGV 73 
                   ++vg+r+si+g++++l +G+ + ++++ip++v+ve +    ++t  v+sgidk+kv    A+i+++++++++++kG+
    EPX72920.1 129 VGVGYRASIEGNNILLKVGYANAVSVQIPPEVQVENP----SPTSLVLSGIDKQKVtqlaAKIRSFKKPEPYKGKGI 201
                   79***********************************....***********************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       419  (0.02337); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.45
# Mc/sec: 1456.29
//
Query:       EPX72921.1  [L=401]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.61   10.7   8.6       0.14   12.7   0.5    3.2  4  DUF2385   Protein of unknown function (DUF2385)
        1.1    9.6  17.7       0.14   12.4   6.4    2.4  2  DUF5364   Family of unknown function (DUF5364)


Domain annotation for each model (and alignments):
>> DUF2385  Protein of unknown function (DUF2385)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.5   1.6e-05      0.14      12      66 ..      72     126 ..      62     130 .. 0.93
   2 ?   -2.2   0.0       0.7   6.3e+03      26      48 ..     145     167 ..     134     204 .. 0.63
   3 ?   -2.6   0.0      0.93   8.3e+03      56      91 ..     201     237 ..     177     241 .. 0.59
   4 ?    1.5   0.3     0.048   4.3e+02      34      64 ..     314     346 ..     306     351 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1.6e-05
     DUF2385  12 iLGalhyLrelCgaeedqewrermkelleaeaasearrarlveaFNrgyrsyasv 66 
                 +L +lh L+el g+ ++++ r++ k+  ea  + e+++++l +++ +gy+s +++
  EPX72921.1  72 VLTTLHELEELLGQINSSRSRDEKKKRYEASVQREKEQKQLEAKYQEGYKSAEKQ 126
                 7899**********************************************99876 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.7
     DUF2385  26 eedqewrermkelleaeaasear 48 
                 +edq + + +++ll    +  ++
  EPX72921.1 145 SEDQAFNTAVEKLLINVYEGSEK 167
                 56666666666655433333333 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 0.93
     DUF2385  56 FNrgyrsyasvyrtCteaaaaaeerll.kegeelaee 91 
                 FN+   + +++  + +e+a+ ++++++ +egee + +
  EPX72921.1 201 FNTPAVQKHDENDETEEQATSKSNNVVnNEGEETSAS 237
                 5554444444555555555555444431466666555 PP

  == domain 4  score: 1.5 bits;  conditional E-value: 0.048
     DUF2385  34 rmkelleaeaase..arrarlveaFNrgyrsya 64 
                 +m++ +++ +++     +++  e FNrgy++ +
  EPX72921.1 314 QMQQAMDSMSPDWyqPANENPQEPFNRGYQKRS 346
                 566666665555322566777899*****9865 PP

>> DUF5364  Family of unknown function (DUF5364)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   6.4   1.6e-05      0.14      75     163 ..      34     123 ..      24     134 .. 0.69
   2 ?    2.8   3.5     0.014   1.3e+02      56     122 ..     198     258 ..     144     313 .. 0.57

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.6e-05
     DUF5364  75 naevnkklkevlkereeeeeaekedaakskealtkkdLesmdvkeLNklLgrkvaenetsskeaaapkssekskeekk.saeeakkkksa 163
                 + +  kk ++++k  e+ ++  ++ ++ +k+a+++kd    +++eL +lLg+ + + + ++k+++ ++s +++ke+k+ +a+ ++  ksa
  EPX72921.1  34 IRNFSKKKQKIIKLEEQASKDPESLNSDQKNAIRSKDAVLTTLHELEELLGQINSSRSRDEKKKRYEASVQREKEQKQlEAKYQEGYKSA 123
                 556677778888888877777777788889*********************987666666666555555555555444233333333333 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.014
     DUF5364  56 dRYhedvalafddledeeknaevnkklkevlkereeeeeaekedaakskealtkkdLesmdvkeLNk 122
                 d + + +a +  d e++e+++++++k  +v+++  ee++     +  ++++ t++ L+  +++ LN+
  EPX72921.1 198 DEFFNTPAVQKHD-ENDETEEQATSKSNNVVNNEGEETS----ASLDEHAHQTTRPLN-RGIQFLNE 258
                 3333333333333.3555666778888888887773332....222223445556654.35666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2371  (0.132244); expected 358.6 (0.02)
Passed bias filter:                      540  (0.0301188); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.29s 00:00:00.88 Elapsed: 00:00:00.45
# Mc/sec: 2693.92
//
Query:       EPX72922.1  [L=363]
Description: RNA 3'-terminal phosphate cyclase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-49  167.9   0.0    2.2e-49  167.7   0.0    1.0  1  RTC         RNA 3'-terminal phosphate cyclase
    8.5e-35  119.4   0.0    1.4e-34  118.7   0.0    1.3  1  RTC_insert  RNA 3'-terminal phosphate cyclase (RTC), insert d


Domain annotation for each model (and alignments):
>> RTC  RNA 3'-terminal phosphate cyclase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  167.7   0.0   2.4e-53   2.2e-49       2     221 ..       8     337 ..       7     338 .. 0.94

  Alignments for each domain:
  == domain 1  score: 167.7 bits;  conditional E-value: 2.4e-53
                 TTTSTHHHHHHHHHHHHH---EEEESTTTTSSS-S--HHHHHHHHHHHHHHT-EEE--STT-SEEEEE------SEEEEEEESSEBHHHHHHHHHHHHT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RTC   2 gegGgqiLRtalaLsaltgkpvrIenIRanRkkPGLraqhltavrllakitnaevegaeigsteleFkPgeikageyevdigtAGsitlllqtllplll 100
                 +++G+++L ++laL++l+g+p+r+e I  n  +PGL+++ ++++rll+k+tn++v   +   t++ ++Pg+i +g++e +     +i+++l++ll+l+l
  EPX72922.1   8 RFKGCEYLTHRLALATLSGTPIRVEGIYPNEADPGLKDYQISFLRLLEKVTNGSVIEISYTGTSFIYRPGNIVGGRVEHACPESRAIGYFLEPLLLLCL 106
                 589***************************************************999977666************************************ PP

                 TSSS-EEEEEEEBSBBTTS--HHHHHHTHHHHHHH.HT.-E.EEEEEEE--BTTTB-EEEEEEEE-.-S.---EB........................ CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxx........................ RF
         RTC 101 fakkpseltlkGgTnvsaapsvdylktvllpllkr.fgvle.lelelkkrGfypkGgGevelevepskk.lkpie........................ 172
                 fak+p++ltl+G+T ++ +p vd+l+t++lp+l++ f+v + +el++ krG++p+GgGev++ ++ +k  l+pi+                        
  EPX72922.1 107 FAKTPTSLTLTGVTSNNEDPGVDVLRTSVLPFLQKrFQVGDeMELRILKRGASPNGGGEVNFLCPITKVsLPPIRvsepgrvfrirgiasstrvapvla 205
                 *********************************987776556**********************665534***************************** PP

                 ................................................................................BSS-HHHHHHHHHHHHHHT CS
                 ................................................................................xxxxxxxxxxxxxxxxxxx RF
         RTC 173 ................................................................................acvDehlqdqlilfmaLak 191
                                                                                                 +c+D+++q  +++ m L++
  EPX72922.1 206 nrlvesargtlnpflpdifiytdvrrgdecgnspgfaitlvaetnkgcsyaaqqcgeagqtpedvgtlcaqkllesiesgGCLDRYTQPSILTGMLLSS 304
                 *************************************************************************************************** PP

                 .-EEEEE...SS--HHHHHHHHHHHHHSS-EEE CS
                 xxxxxxx...xxxxxxxxxxxxxxxxxxxxxxx RF
         RTC 192 gksrirv...aeltlhtetairvieqflgvkfk 221
                 +  +  v    ++t++++t++r ++ f+g +++
  EPX72922.1 305 EDVNSIVigqLNITSQLVTFLRDVKAFFGREYR 337
                 543222222359****************99875 PP

>> RTC_insert  RNA 3'-terminal phosphate cyclase (RTC), insert domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.7   0.0   1.5e-38   1.4e-34       2     103 .]     184     283 ..     183     283 .. 0.98

  Alignments for each domain:
  == domain 1  score: 118.7 bits;  conditional E-value: 1.5e-38
                 S----SEEEEEEEEESS-THHHHHHHHHHHHHHTTTSSEEEEEEE.EE-CGGC-SS-EEEEEEEEE-T.TS-EEEEEEEE-TT--HHHHHHHHHHHHHH CS
  RTC_insert   2 drGrvkrirGvafaarvspsvanrmveaargvLnkllpdvyiytdvvkegkesgkspGfgisLvaetttegvllgaealgekgvppedvGeeaaeeLle 100
                 ++Grv rirG+a ++rv p +anr+ve+arg Ln +lpd+ iytd v++g+e+g+spGf+i+Lvaet+ +g+ + a+++ge g++pedvG+ +a++Lle
  EPX72922.1 184 EPGRVFRIRGIASSTRVAPVLANRLVESARGTLNPFLPDIFIYTD-VRRGDECGNSPGFAITLVAETN-KGCSYAAQQCGEAGQTPEDVGTLCAQKLLE 280
                 79*******************************************.9********************9.5***************************** PP

                 HHH CS
  RTC_insert 101 eie 103
                  ie
  EPX72922.1 281 SIE 283
                 996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (363 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       216  (0.0120475); expected 358.6 (0.02)
Passed bias filter:                      207  (0.0115455); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 2439.16
//
Query:       EPX72923.1  [L=581]
Description: hsp60-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-83  280.5   8.0    3.6e-83  279.8   8.0    1.3  1  Cpn60_TCP1  TCP-1/cpn60 chaperonin family
  ------ inclusion threshold ------
       0.31   11.3   0.7        9.5    6.5   0.1    2.4  2  MecA_N      NTF2-like N-terminal transpeptidase domain


Domain annotation for each model (and alignments):
>> Cpn60_TCP1  TCP-1/cpn60 chaperonin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  279.8   8.0   4.1e-87   3.6e-83       1     489 [.      54     558 ..      54     560 .. 0.93

  Alignments for each domain:
  == domain 1  score: 279.8 bits;  conditional E-value: 4.1e-87
                 HHHHHHCCSSTTXXEEEEEETTSEEEEEXSHHHHHHCSXXXSHH....HHHHHHHHHHCCCCCTTCHHHHHHHHHHHHHHHHHHHHCTXXHHHHHHHHH CS
  Cpn60_TCP1   1 ladivkttlGPkGmdKmlvnkggkvvvTnDGatilkeleiehPa....akllveaaesqdeevGDGTttvviLageLleeaekliaagvhpttiiegye 95 
                 la++v++tlGPkG+++++ +++g++++T+DG+t+++++ +++      a+l++++a++++e +GDGTtt+++La+++ +e+ + +aag +p ++++g++
  EPX72923.1  54 LASAVSVTLGPKGRNVLIDQAFGSPKITKDGVTVARSVSLKDKFenlgARLVQDVASKTNEVAGDGTTTATVLARAIFSETVRNVAAGCNPMDLRRGIQ 152
                 7899*********************************************************************************************** PP

                 HHHHHHHHHHHHHXEEBXSCSTT.HHHHHHHHHHCTTSSXXSTHHHHHHHHHHHHHCHCCCSEECSCCCEECCCCEECEC..TTSEEESEEEESS--SS CS
  Cpn60_TCP1  96 kalekaleaLkeiaveisseekdreeLlkvartslsskltskeaeelsklvvdAvklieenekeldlgrikvvkieggsl..edselveGlvldkgvls 192
                  a+e ++e+L++++++i +     ee+ +va++s++++      +++++l+ +A+           +g+ +v+++++g+   ++ e+ eG+ +d+g++s
  EPX72923.1 153 LAVENVVEFLQANKRDITTA----EEISQVATISANGD------KHIGELLSKAM---------ERVGKEGVITVKEGRTisDELEVTEGMKFDRGYIS 232
                 *************8888887....9*************......9**********.........789***********9966777888*********** PP

                 T.......TSSCEEECEEEEEESS-BS--HHCCHHHCCCCSCCHHHHHHHHHHHHHHHHHHHHHHTTECEEEESS-B-HHHHHHHHHCT-EEE-S-... CS
  Cpn60_TCP1 193 p.......dmpkklenakvllldvsLeiektetkttvvlsdaeeleklekaeekqleellekiiksgvnvvvcqkgiddlalhflakngilalrrv... 281
                 p       + + ++en+ +ll +++++  ++                        +++ le  +++ +++v++++++d +al+ +  n++++  +v   
  EPX72923.1 233 PyfmtdvkSQKVEFENPLLLLSEKKISAVQD------------------------VLPALELAAQQRRPLVIIAEDVDGEALAACILNKLRGQLQVvav 307
                 *9888765556677*****************........................***************************************999** PP

                 ........-HHHHHHHHHHHT--EBSCG.....GGGGCGC-EEEEEEEECCETTCCEEEEE....................................CE CS
  Cpn60_TCP1 282 ........kkkdlerlakatGatavssl.....edltpeelGtakkveeekigsekttiie....................................ev 331
                         ++++l +la +t + ++++      e+ +p ++G+++++   ++++e+t+i++                                      
  EPX72923.1 308 kapgfgdnRRNMLGDLAVLTDSAVFNDEidvsiEKSQPHHFGSCGSI---TVTKEDTIIMKgagdhinvnerceqirsvladpslseyekeklqerlAK 403
                 **************************99887777777888*******...99*********88888888887777776666666666666555555433 PP

                 SSSSXEEEEEEESTCCCHHHHHHHHHHHHHHHHHHHHHHEEEETTTCHHHHHHHHHHCCCCTSXCCHHHHHHHHHHHHTHHHHHHHHHCTSXHHHHHHH CS
  Cpn60_TCP1 332 ksgkiatillrgatdtvldeieraiedAlnvvknaiedekvvpGGGatelelakklkeyaksvsgeeqlaieafakALevipktLaeNaGldpievlak 430
                 +sg+ia+i+++g++++++ e++++i dAln+vk+a+  e+v+pG+G ++++++ +l ++  + + +++l++e+++kA++ +++t+ eNaGl+++ ++ k
  EPX72923.1 404 LSGGIAVIKVGGSSEVEVSEKKDRIVDALNAVKAAVS-EGVLPGAGTSFVKASLRL-SEIPTANFDQKLGVEIVRKAITRPAQTILENAGLEGNLIVGK 500
                 9************************************.******************.677778************************************ PP

                 HHHHHHTTXTTEEEETTTTCEEECCCCTXEEEHHHHHHHHHHHHHHHHHHHCEEEEEXX CS
  Cpn60_TCP1 431 lraahnkgekelgidvesgeiidlveagvvDplkvkrqalksAteaastiLrideiika 489
                 l+++  k+  + g+d++++++idl e gv+Dplkv+r +l  A+ +as++ ++++ +++
  EPX72923.1 501 LKESYGKDF-NIGYDIAKDRYIDLNEIGVLDPLKVVRTGLVDASGVASLMGTTECAVVD 558
                 ***888888.**************************************99988888876 PP

>> MecA_N  NTF2-like N-terminal transpeptidase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.1     0.017   1.5e+02       7      54 ..     159     205 ..     154     227 .. 0.81
   2 ?    6.5   0.1    0.0011       9.5      15      66 ..     374     426 ..     369     443 .. 0.81

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.017
                 HHHHHHHHTT-HHHHHCTB--BSSBSS-HHHHHHHHHHHCCCTT-EEE CS
      MecA_N   7 etFldawakgdykkaasllseqskkeisekeavekyqaiydglqvkkl 54 
                  +Fl+a +k d+ +a ++++ + +++++ k + e ++++++ ++ +++
  EPX72923.1 159 VEFLQA-NKRDITTAEEISQVATISANGDKHIGELLSKAMERVGKEGV 205
                 567766.899******************************99987775 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0011
                 TT-HHHHHCTB--BSSBSS-HHHHHHHHHHHCCCTT-EEEEE.EEEEEEEEET CS
      MecA_N  15 kgdykkaasllseqskkeisekeavekyqaiydglqvkklki.eakkvkkdke 66 
                 +++ +++ s+l  +s +e+ +++++e++ +  +g+ v k+   ++ +v ++k+
  EPX72923.1 374 NERCEQIRSVLADPSLSEYEKEKLQERLAKLSGGIAVIKVGGsSEVEVSEKKD 426
                 577899999**************************997765554445555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (581 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       474  (0.0264376); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.27s 00:00:00.89 Elapsed: 00:00:00.45
# Mc/sec: 3920.25
//
Query:       EPX72924.1  [L=165]
Description: SAGA complex/transcription initiation factor Taf9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.3e-48  161.3   0.0    1.2e-47  161.0   0.0    1.1  1  TFIID-31kDa  Transcription initiation factor IID, 31kD subuni


Domain annotation for each model (and alignments):
>> TFIID-31kDa  Transcription initiation factor IID, 31kD subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  161.0   0.0   6.5e-52   1.2e-47       4     119 ..      13     130 ..      10     133 .. 0.98

  Alignments for each domain:
  == domain 1  score: 161.0 bits;  conditional E-value: 6.5e-52
  TFIID-31kDa   4 rPrdarlihliLaslgvteyeerVvlqLldfayrytssvLedAkvlaehakkke..vslddvrlAiqsrlekqfkepppkelLlelAaerNkipLpkv 99 
                   P+darlihli++slgv +y++ V+lqLl fa+ryt+++++d++v+aeh++ +   +s++dvrlA++s+++++f++pppke+LlelA+erN++pLp++
   EPX72924.1  13 GPKDARLIHLIMSSLGVPAYSQTVPLQLLTFAHRYTQQLVQDSQVYAEHSRGSGvpISVEDVRLAVASQVNHSFTGPPPKEFLLELATERNRKPLPQI 110
                  6*************************************************9998889***************************************** PP

  TFIID-31kDa 100 keklgirLPperycltavny 119
                  ++++g+rLPpe++clt++n+
   EPX72924.1 111 QPSYGLRLPPEKFCLTQPNW 130
                  ******************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       362  (0.0201908); expected 358.6 (0.02)
Passed bias filter:                      288  (0.0160634); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.45
# Mc/sec: 1097.19
//
Query:       EPX72925.1  [L=585]
Description: RNA-binding protein Cip2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.2e-07   29.4   0.1      1e-06   28.5   0.1    1.5  1  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
  ------ inclusion threshold ------
      0.056   13.4   0.0       0.11   12.5   0.0    1.5  1  R3H       R3H domain


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.5   0.1   1.1e-10     1e-06       1      70 []     236     306 ..     236     306 .. 0.90

  Alignments for each domain:
  == domain 1  score: 28.5 bits;  conditional E-value: 1.1e-10
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrelk 70 
                 ++++n+p+++++e L ++F      +     +   +g  +g af +F+++e+A+  ++ lng+++ gr+l+
  EPX72925.1 236 IVIKNIPFSLKKEVLFRVFTALDIPRPYAFNYHfDNGVFRGLAFANFHTPEEAKTVVQVLNGYEITGRRLR 306
                 78******************976666666666667*********************************986 PP

>> R3H  R3H domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.3e-05      0.11       3      59 ..     360     419 ..     359     420 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.3e-05
                 HHHHHHHHHHHHH-S-..-EEE---.--SHHHHHHHHHHHHSSEEEEEE--SS-SEEEEE CS
         R3H   3 llrvekklaefvkdtg..rslefpp.mssyeRriiHelaeaygleseSvGeepkRrvvvt 59 
                 +l+v+  +  f ++t+    l+f++  s +eRr+   la++++l     G+ + ++vv+t
  EPX72925.1 360 VLNVYSHILLFYHRTDnpGDLVFDStTSHEERRVAALLASRMNLNYSVTGDADSKQVVIT 419
                 56777778888877753359*****669******************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (585 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       532  (0.0296726); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 4165.10
//
Query:       EPX72926.1  [L=907]
Description: ubiquitin-protein ligase E3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.4e-36  122.8  14.0    1.7e-35  121.9  14.0    1.5  1  zinc_ribbon_16  Zinc-ribbon like family
     0.0069   17.2   1.0         36    5.5   0.1    4.6  4  WD40            WD domain, G-beta repeat
     0.0072   15.9   7.8     0.0072   15.9   7.8    2.6  3  Zn_ribbon_17    Zinc-ribbon, C4HC2 type
  ------ inclusion threshold ------
       0.44   10.2   2.6       0.63    9.7   1.6    1.7  2  DUF2321         Uncharacterized protein conserved in bacteria
        1.6    9.0   9.2      0.078   13.2   2.9    2.1  2  CTU2            Cytoplasmic tRNA 2-thiolation protein 2
        2.9    8.3   5.9        9.8    6.6   0.7    3.1  3  Ribosomal_L34e  Ribosomal protein L34e


Domain annotation for each model (and alignments):
>> zinc_ribbon_16  Zinc-ribbon like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.9  14.0   5.7e-39   1.7e-35       1     124 [.     781     906 ..     781     907 .] 0.76

  Alignments for each domain:
  == domain 1  score: 121.9 bits;  conditional E-value: 5.7e-39
  zinc_ribbon_16   1 cnfckksitpfsakektnilqaavssaGgakfl.dksksslcprcskplpkcavcglslGtsdvtnkd.skrksvvkevssskkrfekwlsfcls 93 
                     cn+ckks++++ +      +  a + + ++k   +k+    cp+c +p+pkc+vcglsl +++v++++ ++  s   + ++ k+++++w+sfcl 
      EPX72926.1 781 CNYCKKSLLSLNEDYPKSDQTVASTLTKTRKLAsQKQSGHTCPHCRQPFPKCSVCGLSLSDQNVPQNNvNNITSQNPKDRERKRNYGRWFSFCLR 875
                     ********888766553333333222333444313444468**************************9333333334445667889********* PP

  zinc_ribbon_16  94 cghgahashakewfsthsicpvadcncecke 124
                     c hg+ha+ha+ewf +hs+cpv+dc+c+c  
      EPX72926.1 876 CYHGTHAAHASEWFMRHSVCPVPDCDCNCAL 906
                     *****************************75 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.1      0.89   2.6e+03       9      28 ..      37      63 ..      31      70 .. 0.62
   2 ?    5.5   0.1     0.012        36      15      38 .]      93     119 ..      83     119 .. 0.80
   3 ?    5.4   0.0     0.013        38      12      36 ..     140     164 ..     125     166 .. 0.81
   4 ?   -0.2   0.0      0.71   2.1e+03      16      38 .]     190     208 ..     180     208 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.89
                SS.SS.....EEEEEEETTSSEEE.EE CS
        WD40  9 GH.ss.....vtslafspdgawla.sG 28
                +H ++     + +l+  p ++ ++ +G
  EPX72926.1 37 THsFWksqkgIKCLDSFPGSSEILgAG 63
                443113345599**9777776665344 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.012
                 EEEEETTSSEEEEEET....TSEEEEEE CS
        WD40  15 slafspdgawlasGsd....DgtvriWd 38 
                 sl+fs++g++ a +      D +++iWd
  EPX72926.1  93 SLSFSDSGSLAA-SYAksknDLSLKIWD 119
                 799*******54.5323457*******9 PP

  == domain 3  score: 5.4 bits;  conditional E-value: 0.013
                 SEEEEEEETTSSEEEEEETTSEEEE CS
        WD40  12 svtslafspdgawlasGsdDgtvri 36 
                 ++ s++f+++ ++l++Gs  ++++i
  EPX72926.1 140 GIVSVCFDKNPSLLFAGSSTRSIYI 164
                 488**************87888877 PP

  == domain 4  score: -0.2 bits;  conditional E-value: 0.71
                 EEEETTSSEEEEEETTSEEEEEE CS
        WD40  16 lafspdgawlasGsdDgtvriWd 38 
                 +    +g+++a+ s+Dg + ++d
  EPX72926.1 190 V----SGNYFAANSYDGYIAVYD 208
                 4....8999987699****9988 PP

>> Zn_ribbon_17  Zinc-ribbon, C4HC2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.2       1.1   3.4e+03       6      11 ..     780     785 ..     776     789 .. 0.78
   2 ?   -0.8   0.0       0.4   1.2e+03       4      16 ..     829     841 ..     826     848 .. 0.76
   3 !   15.9   7.8   2.4e-06    0.0072      18      54 ..     870     905 ..     865     907 .] 0.91

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 1.1
  Zn_ribbon_17   6 sCayCe 11 
                   sC+yC+
    EPX72926.1 780 SCNYCK 785
                   899997 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.4
  Zn_ribbon_17   4 lksCayCelavkg 16 
                     +C++C l++  
    EPX72926.1 829 FPKCSVCGLSLSD 841
                   5689999998765 PP

  == domain 3  score: 15.9 bits;  conditional E-value: 2.4e-06
  Zn_ribbon_17  18 vvlcgvCeHvlHasCarewfenddlaeCps.GCGckcl 54 
                   + +c +C H +Ha+ a+ewf      +Cp+  C c+c 
    EPX72926.1 870 FSFCLRCYHGTHAAHASEWFMRHS--VCPVpDCDCNCA 905
                   779*****************9988..****99*****6 PP

>> DUF2321  Uncharacterized protein conserved in bacteria (DUF2321)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       2.7     8e+03      33      80 ..      46      91 ..      39      95 .. 0.64
   2 ?    9.7   1.6   0.00021      0.63      10      79 ..     765     832 ..     763     857 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 2.7
     DUF2321 33 GektitkcpkCsteirGkyyvegvislgkeyevpsyCkkCgkpyPWtk 80
                G k ++++p  s+ei G+    g +sl  + + p++    + +yP + 
  EPX72926.1 46 GIKCLDSFPG-SSEILGAGSSTGNLSLL-SEKYPEFSAVVTPKYPRAC 91
                5555555554.56788888888877776.4455777777777777554 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00021
     DUF2321  10 nGHvitdsvnkkeelveeyCekcGektitkcpkCsteirGkyyvegvislgkeyevpsyCkkCgkpyPWt 79 
                 nGHv+++s + + +   +yC+k+  ++ +++pk ++ +  + +     +l+++ +  + C +C +p+P  
  EPX72926.1 765 NGHVMQTSPKPSLYISCNYCKKSLLSLNEDYPKSDQTVASTLT--KTRKLASQKQSGHTCPHCRQPFPKC 832
                 9************************************998854..5558999999*************65 PP

>> CTU2  Cytoplasmic tRNA 2-thiolation protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.4         5   1.5e+04      60      86 ..     366     392 ..     360     404 .. 0.58
   2 ?   13.2   2.9   2.6e-05     0.078      11      79 ..     789     863 ..     783     877 .. 0.73

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 5
        CTU2  60 kewkrtitiselseteseeekeeleka 86 
                 ++ k++i+ se+s+ +s++ +++lek 
  EPX72926.1 366 EDHKEDIEFSETSSYSSTNIENSLEKI 392
                 556777777777766666655444443 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 2.6e-05
        CTU2  11 lklekdfpstvstvvrTgeKLvknksseeae......letsekCalCglplddkakewkrtitiselseteseee 79 
                 l+l++d+p+  +tv  T +K  k  s++++        +   kC++Cgl+l+d++  +++  +i++++++ +e++
  EPX72926.1 789 LSLNEDYPKSDQTVASTLTKTRKLASQKQSGhtcphcRQPFPKCSVCGLSLSDQNVPQNNVNNITSQNPKDRERK 863
                 6899*****9999999999888877766555778887777899********666655555555555555544444 PP

>> Ribosomal_L34e  Ribosomal protein L34e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       1.1   3.2e+03      25      48 ..     226     249 ..     221     267 .. 0.83
   2 ?    6.6   0.7    0.0033       9.8      28      84 ..     765     825 ..     747     828 .. 0.82
   3 ?    3.1   0.1     0.041   1.2e+02      41      84 ..     829     876 ..     826     881 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.1
  Ribosomal_L34e  25 tpggklvyqykkkkgkapkCgdck 48 
                      pg k    y + + +++kCg+  
      EPX72926.1 226 NPGEKNKNSYFQTRFSNEKCGQIS 249
                     59999999999*********9844 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0033
  Ribosomal_L34e  28 gklvyqykkkkgkapkCgdckkkLqGipalrp....kelsrlsktkktvsRaYGgslcakc 84 
                     +  v+q+  k +    C  ckk L ++++  p    +  s+l kt+k  s+   g++c++c
      EPX72926.1 765 NGHVMQTSPKPSLYISCNYCKKSLLSLNEDYPksdqTVASTLTKTRKLASQKQSGHTCPHC 825
                     5568888999999999********99976554111056799******************99 PP

  == domain 3  score: 3.1 bits;  conditional E-value: 0.041
  Ribosomal_L34e  41 apkCgdckkkL..qGipalrpkelsrlsktkktvsRaYGg..slcakc 84 
                      pkC+ c+  L  q +p+   +++++ + + ++ +R YG   s+c +c
      EPX72926.1 829 FPKCSVCGLSLsdQNVPQNNVNNITSQNPKDRERKRNYGRwfSFCLRC 876
                     59*********55579999999999999999*******9633556666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (907 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       588  (0.032796); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.78u 0.31s 00:00:01.09 Elapsed: 00:00:00.54
# Mc/sec: 5072.46
//
Query:       EPX72927.1  [L=183]
Description: rRNA processing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.5e-33  113.5  14.4    6.5e-33  113.5  14.4    1.6  2  Efg1      rRNA-processing protein Efg1


Domain annotation for each model (and alignments):
>> Efg1  rRNA-processing protein Efg1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.5  14.4   3.6e-37   6.5e-33       1     114 []      12     125 ..      12     125 .. 0.95
   2 ?   -1.8   0.1      0.21   3.8e+03      10      13 ..     147     150 ..     134     179 .. 0.46

  Alignments for each domain:
  == domain 1  score: 113.5 bits;  conditional E-value: 3.6e-37
                 HHHHHHHHHHHHS-SS---SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HH---HHHHHHHHHHHHHHHHHH CS
        Efg1   1 lkkkiRdlkRlLakkekLpaevreekereLkaleaeleeaekkekekklakkYhkvrFfErkKatRklkrlkkql.eeledeeekeelekkleelevdl 98 
                 +kkkiRd +RlL kke+Lpa+vr+e+er+L+al+++l+  + ++k+ k+ ++Y+k+rFfErkKa+R++k+l+k+l + + d +eke+++++l++++vdl
  EPX72927.1  12 VKKKIRDNERLL-KKENLPANVRVEHERALAALQDQLQGVQLEHKKIKYYERYKKIRFFERKKAERHIKQLEKRLlDPSIDVSEKEKMKEQLHKYKVDL 109
                 69**********.889*******************************************************998725667778**************** PP

                 HHHHHS-TTS----SS CS
        Efg1  99 nYvlyyPklekYisLy 114
                  Y+  yP l kY+sLy
  EPX72927.1 110 LYIKAYPPLVKYVSLY 125
                 ***************9 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.21
                 HHHS CS
        Efg1  10 RlLa 13 
                 RlL+
  EPX72927.1 147 RLLS 150
                 3333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1185  (0.066094); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.37s 00:00:00.98 Elapsed: 00:00:00.58
# Mc/sec: 946.07
//
Query:       EPX72928.1  [L=73]
Description: hypothetical protein SOCG_05719 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       665  (0.0370907); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.35s 00:00:00.88 Elapsed: 00:00:00.54
# Mc/sec: 409.27
//
Query:       EPX72929.1  [L=432]
Description: actin-like protein Arp3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.2e-84  282.5   0.0    1.7e-50  171.8   0.0    2.0  2  Actin     Actin
    0.00064   18.6   0.0       0.36    9.6   0.0    2.2  2  MreB_Mbl  MreB/Mbl protein
     0.0036   17.7   0.0     0.0091   16.4   0.0    1.8  1  FtsA      Cell division protein FtsA


Domain annotation for each model (and alignments):
>> Actin  Actin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  171.8   0.0   2.9e-54   1.7e-50       9     191 ..      16     233 ..      11     247 .. 0.93
   2 !  109.0   0.0   3.4e-35     2e-31     234     404 ..     243     424 ..     234     426 .. 0.82

  Alignments for each domain:
  == domain 1  score: 171.8 bits;  conditional E-value: 2.9e-54
       Actin   9 lDnGssttraGyagedaPkavipslvgkprgrkvea..........................klyvgdealt.krpelevrspvedGvvedwdaveelw 80 
                 +  G+++ ++Gyag+daP  v+p++++  +    +                           ++y+g++al+    ++++ +p+++G +e+wd++e+ w
  EPX72929.1  16 ISSGTGYSKLGYAGNDAPSYVFPTVIATRSAGGPRPavpskpsylapkgsghlsgkrgtedlDFYIGNDALSkASAGYSLDYPIRHGQIENWDHMERFW 114
                 56799**********************8888765557999999****************************9559************************ PP

       Actin  81 ehvlkeelkvdpeehpllltepplnppkqrekalEivfEkfkvpalylaksavlsafasgks........tglvvDsGasvtsvvpVldGyvLkkairr 171
                 +++l++ l+ +pe+h +lltepplnpp++re+++Ei+fE+f++++ly+a +avl++ as  s        tg vvDsG++vt+++pV +Gyv+  +i++
  EPX72929.1 115 QQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSskvterslTGTVVDSGDGVTHIIPVAEGYVIGSSIKT 213
                 ******************************************************99888777888********************************** PP

       Actin 172 sdlgGkaLteqlkellsskn 191
                 ++++G+++t  +++ll+++n
  EPX72929.1 214 MPVAGRDITYFVQSLLRDRN 233
                 ****************9974 PP

  == domain 2  score: 109.0 bits;  conditional E-value: 3.4e-35
       Actin 234 eeiKesvcevsedpegdeeksssspeksYeLPDg..........................seiklgeeRfkvpEiLFdpsligsesaleeekskllgis 306
                 e iKe+  +v  d                                               +++++g eRf +pEi F+p+++ s+          + ++
  EPX72929.1 243 ERIKEEYAYVCPD--------------------IvkefarfdqepdrylkytaetmggrtTAVDVGFERFLAPEIFFNPEIASSDFI--------TPLP 313
                 4555555555555....................3444444444444444444445555556999***************99887655........78** PP

       Actin 307 elivaainacdvdlrpeLlanivvtGGnsllpglteRlekelaql..............askgvkvkiiapeeerkysaWiGGSiLAslgtfqqlwvsk 391
                 el+ + ++ +++d+r+ L++niv++GG++l++++  Rl+++++++               s gv v++i+ + ++++++W+GGS+LA++++f   + +k
  EPX72929.1 314 ELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGHRLQRDIKHIvderihrsemlsgaKSGGVDVNVITHK-RQRNAVWFGGSLLAQTPEFGAYCHTK 411
                 *********************************************9999999998888777778*******9.9************************* PP

       Actin 392 qEYeEqGssvver 404
                 ++YeE+G+s+ +r
  EPX72929.1 412 ADYEEYGASIARR 424
                 *********9887 PP

>> MreB_Mbl  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.6   0.0     6e-05      0.36     145     214 ..     184     255 ..      93     263 .. 0.83
   2 !    7.0   0.0   0.00038       2.3     250     299 ..     309     357 ..     302     376 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 6e-05
                 S-EEEEEE-SS-EEEEEEETTEEEEE..EEES-SHHHHHHHHHHHHHHHHSEE--HHHHHHHHHHH-BSS-- CS
    MreB_Mbl 145 sgnmvvdiGggttevavislggivts..ksvrvaGdeldeaiikyirkkynlliGertaekikieigsavke 214
                     vvd G g t +  ++ g ++ s  k++ vaG ++   + +++r + +     +tae+ik e ++++++
  EPX72929.1 184 LTGTVVDSGDGVTHIIPVAEGYVIGSsiKTMPVAGRDITYFVQSLLRDRNENDSSLKTAERIKEEYAYVCPD 255
                 35579**********999888777542267789********************************9998876 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.00038
                 HHHHHHHHHHHHHTS-HHHHHHHHHH-EEEESGGGGSBTHHHHHHHHHSS CS
    MreB_Mbl 250 vsaiveavkevLektppeLaadivdrgivltGGgallkgldkllseetgl 299
                 ++ + e v +v ++ p +  + +++  ivl+GG++l+k++ + l++ ++ 
  EPX72929.1 309 ITPLPELVDNVVQSSPIDVRKGLYK-NIVLSGGSTLFKNFGHRLQRDIKH 357
                 5556688999999999999999885.59***************9998764 PP

>> FtsA  Cell division protein FtsA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   1.5e-06    0.0091       2      71 ..     188     324 ..     187     422 .. 0.69

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 1.5e-06
                 EEEE-SSSEEEEEEETTEEEE..EEEES--HHHHHHHHHHHH......T--HHHHHHHHHHH--S--....................EEEEEHHHHH.. CS
                 xxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxx....................xxxxxxxxxx.. RF
        FtsA   2 lvDiGagktdvavaedgalvh..lrvigvggngitkdiakal......rtaveeAerikikyGsala....................ekeigrkels.. 70 
                 +vD G g t ++ + +g ++   +++ +v+g+ it  ++  l        ++++Aerik +y+++++                             +  
  EPX72929.1 188 VVDSGDGVTHIIPVAEGYVIGssIKTMPVAGRDITYFVQSLLrdrnenDSSLKTAERIKEEYAYVCPdivkefarfdqepdrylkytA--------Etm 278
                 8****************9999999*************99988777777889*************999888777776555544444441........033 PP

                 .............................................G CS
                 .............................................x RF
        FtsA  71 .............................................g 71 
                                                               
  EPX72929.1 279 ggrttavdvgferflapeiffnpeiassdfitplpelvdnvvqssP 324
                 3333334444444445555555555544444444444444444440 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (432 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       308  (0.0171789); expected 358.6 (0.02)
Passed bias filter:                      295  (0.0164538); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.32s 00:00:00.94 Elapsed: 00:00:00.51
# Mc/sec: 2535.25
//
Query:       EPX72930.1  [L=153]
Description: hypothetical protein SOCG_00691 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00049   20.7   0.2      0.015   15.9   0.0    2.2  2  WBP-1     WW domain-binding protein 1
  ------ inclusion threshold ------
      0.026   14.4   0.7      0.052   13.4   0.7    1.5  1  TMEM61    TMEM61 protein family
       0.14   12.4   0.0        2.4    8.5   0.0    2.1  2  MLANA     Protein melan-A
       0.18   11.3   0.0       0.25   10.9   0.0    1.2  1  HNHc_6    Putative HNHc nuclease
       0.97    8.4   7.1        2.6    6.9   1.7    2.1  2  TMEM171   Transmembrane protein family 171
          1    9.5   7.3       0.23   11.6   3.5    1.8  2  CcmD      Heme exporter protein D (CcmD)


Domain annotation for each model (and alignments):
>> WBP-1  WW domain-binding protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   4.9e-06     0.015      27     102 ..      30     113 ..      24     115 .. 0.43
   2 ?    2.7   0.0     0.067     2e+02      81      99 ..     134     152 ..     124     153 .] 0.76

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 4.9e-06
       WBP-1  27 vwtllillsCicalak.rraklrleqqerqreinlvayreaknsaslv.......ldlrllaslklPsyeevlkaarpetPpPp 102
                 ++ +++l   +++l+  r+ +  l+  + q+e  + + r+  ++++          +l  ++   +Ps++++     ++tPpPp
  EPX72930.1  30 IFLVVALCFSFIILMLfRQRRNALQVLQEQQELMSRQRRGRIEATDAAlqrrrnkEPLPTYEPPEIPSFDDIEDYPVSNTPPPP 113
                 3333333333333333322222222222222322222222222222221111001223355666678899**998899****99 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.067
       WBP-1  81 slklPsyeevlkaarpetP 99 
                 s+++Psye++  a+ +++P
  EPX72930.1 134 SERPPSYENISIAQDKTSP 152
                 578*******655555555 PP

>> TMEM61  TMEM61 protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.7   1.7e-05     0.052     111     176 ..      89     151 ..      80     153 .] 0.77

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1.7e-05
      TMEM61 111 tpkvvaiPtyeeavacplaeGPltppaqpveedleasasgdallgaqsalpPPsyesvilaadavs 176
                 t +  +iP++++   +p+++ P+ p++    ++l +   ++a  +a+ +  PPsye + +a+d  s
  EPX72930.1  89 TYEPPEIPSFDDIEDYPVSNTPPPPATF---NELGEFVEQNAGSTADFSERPPSYENISIAQDKTS 151
                 5556689**************9977766...44555566677777888889**********99765 PP

>> MLANA  Protein melan-A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.0   0.00079       2.4      30      89 ..      31      90 ..      24     115 .. 0.73
   2 ?    1.8   0.0     0.095   2.8e+02      96     110 ..     133     147 ..     120     152 .. 0.75

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00079
       MLANA 30 llvvvLaillllgCwyykrrsGYkslrskslkvstlktlvgegeleelakadsklalqef 89
                 lvv L   +++   + +rr+  + l++++  +s +++   e + + l+++ +k +l  +
  EPX72930.1 31 FLVVALCFSFIILMLFRQRRNALQVLQEQQELMSRQRRGRIEATDAALQRRRNKEPLPTY 90
                57888999999****************999888888877777766666666666665555 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.095
       MLANA  96 vpdapPaYekiaaeq 110
                  ++ pP+Ye i+  q
  EPX72930.1 133 FSERPPSYENISIAQ 147
                 5678******98654 PP

>> HNHc_6  Putative HNHc nuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   8.3e-05      0.25      65     113 ..       8      60 ..       4      71 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 8.3e-05
      HNHc_6  65 iiekGleeislrdcslklarelielliatlfeydiplav....ktldllredk 113
                 ++ekG e++ +   s  l r li l++a++f + i +      ++l++l+e++
  EPX72930.1   8 ESEKGSENVGFDPSSTLLGRFLIFLVVALCFSFIILMLFrqrrNALQVLQEQQ 60 
                 799******************************99885411114566666665 PP

>> TMEM171  Transmembrane protein family 171
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.3    0.0035        10     163     202 ..      23      67 ..       5     100 .. 0.71
   2 ?    6.9   1.7   0.00087       2.6     220     256 ..     109     143 ..     100     153 .] 0.73

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.0035
     TMEM171 163 qilGplivl..vGLCf.fvvahv..kkrnnlsvsqdaseseegqt 202
                  +lG  +++  v LCf f++  +  ++rn+l+v q+++e   +q 
  EPX72930.1  23 TLLGRFLIFlvVALCFsFIILMLfrQRRNALQVLQEQQELMSRQR 67 
                 56776554323799*966665543367888999999888766554 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.00087
     TMEM171 220 PPPPPpyfaessasavtkspgassllasenPPsyysi 256
                  PPPP+ f e     v + +g+ +   se PPsy+ i
  EPX72930.1 109 TPPPPATFNEL-GEFVEQNAGSTA-DFSERPPSYENI 143
                 5999999*995.455566666555.789******976 PP

>> CcmD  Heme exporter protein D (CcmD)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   3.5   7.7e-05      0.23      11      41 ..      31      61 ..      31      70 .. 0.92
   2 ?   -1.6   1.0      0.98   2.9e+03      25      42 ..      64      81 ..      62      83 .. 0.59

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 7.7e-05
        CcmD 11 YgitllvlagLilwslrdrrrllrelrrlea 41
                + +++l++   il+  r+rr +l+ l++++ 
  EPX72930.1 31 FLVVALCFSFIILMLFRQRRNALQVLQEQQE 61
                5689**********************99985 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.98
        CcmD 25 slrdrrrllrelrrleaR 42
                s+ +r r+ +  ++l++R
  EPX72930.1 64 SRQRRGRIEATDAALQRR 81
                455556666666667776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1041  (0.0580624); expected 358.6 (0.02)
Passed bias filter:                      802  (0.044732); expected 358.6 (0.02)
Passed Vit filter:                        94  (0.0052429); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.52u 0.32s 00:00:00.84 Elapsed: 00:00:00.49
# Mc/sec: 945.49
//
Query:       EPX72931.1  [L=284]
Description: tRNA 2'-O-ribose methyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-69  233.9   0.0    1.5e-69  233.7   0.0    1.1  1  FtsJ             FtsJ-like methyltransferase
     0.0059   16.5   0.0     0.0093   15.8   0.0    1.3  1  Methyltransf_23  Methyltransferase domain


Domain annotation for each model (and alignments):
>> FtsJ  FtsJ-like methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  233.7   0.0   1.6e-73   1.5e-69       1     177 []      21     207 ..      21     207 .. 0.97

  Alignments for each domain:
  == domain 1  score: 233.7 bits;  conditional E-value: 1.6e-73
                 CCCCHHHHHHHHHHHHT-S-TT-EEEECT-TTSHHHHHHCCT...........T.-SEEEEEESSSSHHHTTEEEECS-CCCSSHHHHHCHCHHHSSEE CS
        FtsJ   1 yrsRsayKLleidekfklfkpgktvvDlgaaPGgwsqvllqrl..........gakgkvvavDlqpmaplpgvttiqgditdpetiekikealserkvd 89 
                 +r+Rsa+KL+++de+f+lf+  k+vvDl+aaPG+wsqvl++rl          ++++++vavDlqpmap++gv+t+q dit+p+t  +i+ +++++++d
  EPX72931.1  21 WRARSAFKLMQLDEQFHLFEGAKRVVDLCAAPGSWSQVLSRRLientdstssnEERPRIVAVDLQPMAPIEGVSTLQLDITHPRTLSTILSHFGNEPAD 119
                 79*****************************************8877776654336******************************************* PP

                 EEEE--S-SS-CHHHHHHHHHCCCCHHHHCCHCCCCECCCEEEECCCHCCCHHHHHHHHHCCEEEEEEEE-SS--CCG-EEEEEEEEC CS
        FtsJ  90 lvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtfvlkifrgeeteallkqlkkfFekvsvvkPkssrsesseeflvcrgf 177
                 lvvsDgapdv+g hdldey+q+q+llaa+++a+ +lkpgg fv+kifrg++++ l++ql+ +F+kv+++kP+ssr +s e+f+vc++f
  EPX72931.1 120 LVVSDGAPDVTGLHDLDEYIQAQILLAAFNMAVCILKPGGKFVAKIFRGRDVSLLYSQLRLMFRKVTCAKPRSSRASSLESFVVCEDF 207
                 *************************************************************************************987 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0     1e-06    0.0093      21     139 ..      40     191 ..       8     203 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1e-06
  Methyltransf_23  21 raggrvLdiGcGtGillevlre.............ngfsvtgvDlspeaveiae...............kakkaqkdqfdeqeaaepqgkfdlI 86 
                      +  +rv+d+ ++ G++++vl++             ++  +++vDl p+a    e               +++ +++ ++   +  +++g +d+ 
       EPX72931.1  40 EGAKRVVDLCAAPGSWSQVLSRrlientdstssneERPRIVAVDLQPMAPI--EgvstlqldithprtlSTILSHFGNE-PADLVVSDGAPDVT 130
                      3457****************8868888888888766789999999997543..23469999999999998899999988.7788889******* PP

  Methyltransf_23  87 vlrevlehvpd..ppellrqiatllkpgGylllseplasl......kedrllldwlylvpa 139
                       l ++ e ++   + ++++++  +lkpgG ++   +  ++      + + ++++++++ p+
       EPX72931.1 131 GLHDLDEYIQAqiLLAAFNMAVCILKPGGKFVAKIFRGRDvsllysQLRLMFRKVTCAKPR 191
                      **********65688*****************99975554566764455557777776666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (284 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       304  (0.0169558); expected 358.6 (0.02)
Passed bias filter:                      279  (0.0155614); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.48
# Mc/sec: 1791.59
//
Query:       EPX72932.1  [L=324]
Description: protein phosphatase type 2A [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   8.2e-107  357.1   0.0   9.7e-107  356.9   0.0    1.1  1  PTPA      Phosphotyrosyl phosphate activator (PTPA) protein


Domain annotation for each model (and alignments):
>> PTPA  Phosphotyrosyl phosphate activator (PTPA) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  356.9   0.0  5.4e-111  9.7e-107       1     301 []      26     320 ..      26     320 .. 0.96

  Alignments for each domain:
  == domain 1  score: 356.9 bits;  conditional E-value: 5.4e-111
                 -B----SCHHHHHHCCCHHHHHHHHHHHHHHHHHT........T-SS-HHHHHHHHHHHHHCCCTS---SS--SSS-THHHHHHHHHHHHHHHHHHHHS CS
        PTPA   1 pakrileeedlekfkkSkayadilefisrlneavkgkkleeeeeasesvekllklLdeleelideippeeqpsRfGnkafrtwhdrleeraeelleell 99 
                 p+k i e +d++ f+ Skay +++++i++ln+a +g +   + + s++v+++l++L++++e++d+ip e++++RfGn+afr+wh++l +ra+++l++++
  EPX72932.1  26 PEKLIEEAKDMQPFRLSKAYVRLVSYIQALNAASTGIQDY-HVQYSSRVANVLDVLEQVQEITDSIPLEPGRHRFGNPAFRRWHAKLVNRAPTILDTIV 123
                 8999********************************9997.57779***************************************************** PP

                 -GGGGGG......HHHHHHHHHTTT-BTTTTEE-HHHHHHHHHHHHHHHHTT-STT....--HHHHHHHHHHHHHHHHHHHHHTT-EES--------SS CS
        PTPA 100 peelkkaelekaaieelkaYlkesfGnatrlDYGtGhElsFlafllcLeklgllkeeeeedeealvlkvfekYlelvrrLqstYtLepAgshGvwGLDD 198
                 p++l +a        el +Y+++sfGna+r+D+GtGhEl+Fl fl  L  l+ll+    ed +a+ l v +kYle++r+++++Y+LepAgshGvwGLDD
  EPX72932.1 124 PASLGSA------QIELLDYFLGSFGNAQRIDFGTGHELNFLGFLKGLDLLNLLT---YEDCAAVGLYVTHKYLEVCRNIIMKYRLEPAGSHGVWGLDD 213
                 9997754......89***************************************4...56*************************************** PP

                 S-SHHHHHHHHCSSS-....G....GGGG-HHHHHHHTTT-HHHHHHHHHHHH--S-HHHH-HHHHHHHCC--HHHHHHHHHHHHHHHTTT-HHHHTT- CS
        PTPA 199 yqflpflfGsaQlveh....kklkpksildaevveeyakeylYlsaiafinevKkgpfrehSpmLydisavktWekvnkGlikmYkaevLskfpvvqhf 293
                 ++f+p++fGs+Ql+       +l+p++ild+++ +e +k++lY+sai+fin +Kkgpf ehSp+Lydi+av++W+kvn+Gl+kmY+ evLsk+pvvqhf
  EPX72932.1 214 HFFIPYIFGSSQLAAPggntLNLRPNAILDKKLTKELSKSNLYFSAIDFINIMKKGPFYEHSPILYDITAVPSWSKVNQGLLKMYDVEVLSKYPVVQHF 312
                 ************98776654557**************************************************************************** PP

                 -BBSSSBS CS
        PTPA 294 lfGsllpw 301
                  fG+l+p+
  EPX72932.1 313 HFGNLFPF 320
                 *****997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (324 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       411  (0.0229238); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2443.22
//
Query:       EPX72933.1  [L=222]
Description: lipoate-protein ligase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.3e-09   35.6   0.0    1.2e-08   35.0   0.0    1.3  1  BPL_LplA_LipB  Biotin/lipoate A/B protein ligase family


Domain annotation for each model (and alignments):
>> BPL_LplA_LipB  Biotin/lipoate A/B protein ligase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.0   0.0   6.5e-13   1.2e-08      25     131 .]      79     176 ..      73     176 .. 0.82

  Alignments for each domain:
  == domain 1  score: 35.0 bits;  conditional E-value: 6.5e-13
                    -EEEEEEESS-B-B--B-TTSEEEEEEEEESS...-CCGTHHH..HHHHHHHHHHHH.......HHTT-TTEEEETTTEEEETTEEEEEEEEEEEE CS
  BPL_LplA_LipB  25 glvvvrrqtgGrnvwhspkgeltyslllspeqktfqnrvlely..vsllvlavlealgy.rdskpgiegipvfikwpnDlyvngrKlaGiavtstr 117
                    g++v++  +gG+ ++h+p++ l y +l++         + + +    + ++++++  g  +  + + +g++           +++K+a+i+++ +r
     EPX72933.1  79 GVKVIKALRGGQTTYHGPGQLLVYPILDLNAL---HLNPRKYVskLEEAIIQTCRHFGMkTAHTNEHTGVWLT---------DDEKIAAIGIHLRR 162
                    79999***********************9665...44455544556677777777776434477888888888.........************** PP

                    TTS-EEEEEEEEEE CS
  BPL_LplA_LipB 118 gktlhhivigvgvn 131
                    + t+h+++++v+++
     EPX72933.1 163 NITSHGLALNVSTD 176
                    ***********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       356  (0.0198561); expected 358.6 (0.02)
Passed bias filter:                      315  (0.0175693); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1583.15
//
Query:       EPX72934.1  [L=396]
Description: BUD22 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-64  217.6  38.9    7.5e-64  216.7  38.9    1.5  1  BUD22     BUD22


Domain annotation for each model (and alignments):
>> BUD22  BUD22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  216.7  38.9   4.2e-68   7.5e-64       2     432 .]      28     396 .]      27     396 .] 0.67

  Alignments for each domain:
  == domain 1  score: 216.7 bits;  conditional E-value: 4.2e-68
       BUD22   2 hhalkkLrkalkkakgferqklvkklKtakkekkskklerleeelealKslDleqiAekilaskllktkklaeseelpealksikdkkpksnpeeknee 100
                 hh +k+L +alkka gferqkl +++K+a+++++++k++r e+el+ +K++D  ++ e ++++k+l++k+ ++     +++k ++ ++  +n e     
  EPX72934.1  28 HHFKKQLTHALKKAVGFERQKLARRIKSAREQQENDKVARYEKELDFSKKYDFSKLTEFCFYRKVLRNKEYRSL---LDEHKVVEFPSDITNDE----- 118
                 99*******************************************************************99994...44444434444455544..... PP

       BUD22 101 lektkalenvtsrLlnsktvkevveeivesvkkllgiekkkkkkeeekkkkkkkkkkkkkkeeeeeeesdkeeesedsedeekeeseddeeeeeededd 199
                        +nv +rLlns++v e+v++  + ++k++ +++      +e++ + ++++ ++k+e e + ++  ++ s +s++     se + ++ ++ + +
  EPX72934.1 119 ------EKNVIARLLNSNPVTESVNATCRLLDKCIVMNN------PEADTQPRDQSLSSKAEPELHPDRLRQNPSLNSDK-----SETEIKALQQTKPQ 200
                 ......57***********************99999888......33333332222222222222111222222222222.....22222222222221 PP

       BUD22 200 edaeedeedeeaeerelaqydgllasddededeyneetdeesseesdssdssesasesesessekkkkkkkkkkkkakakkvtsstfLPsLmgGYis.. 296
                 ++         +e+++ ++ ++ ++++ ed+          + e++d s ++  + +s++e+++++++  ++ ++ +  ++ +s+ +LP+L++G+    
  EPX72934.1 201 HEV-------TTESNSSSEINSSIDQSHEDNV---------KLENRDISPEEGVDVDSRREAATNENENDEEDEMFTIPATKSSTSNLPELAAGFLDpl 283
                 111.......1122222222222222333333.........222222222222223333333333122222333333333334889***********99 PP

       BUD22 297 Gsedd....easdaeesvapkRKNRrGQrARraIwEKKYGknAkHvkkekekekeerkerqkeyeerdsGWdakrgakaeedksekkskskakkkkkkk 391
                 G++d+    e   ++e   pkRKNRrGQrAR+aIwEKK+Gk A+Hv k++e+e+ er+erq+++eer+    akr+ ka+  +                
  EPX72934.1 284 GEDDEfvqkE---MDEMDRPKRKNRRGQRARQAIWEKKFGKTANHVVKKREQEQLEREERQRKFEERE----AKRARKAAMAQ---------------- 359
                 9999785333...33455799************************9999*******************....99998888877................ PP

       BUD22 392 kddkkakaaaekelHPSWeAkkkakekkkaa.kfqGKKIvFD 432
                 +d+   k++++++lHPSWeA+kk+k  ++ a +fqGKKIvFD
  EPX72934.1 360 QDS---KTSQAEKLHPSWEARKKQK--LQPAgPFQGKKIVFD 396
                 233...3357789**********99..55555*********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (396 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2520  (0.140554); expected 358.6 (0.02)
Passed bias filter:                      504  (0.0281109); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.30s 00:00:00.95 Elapsed: 00:00:00.46
# Mc/sec: 2566.23
//
Query:       EPX72935.1  [L=754]
Description: autophagy associated protein kinase regulatory subunit Atg13 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.8e-63  212.8   0.2    8.4e-63  212.3   0.2    1.2  1  ATG13        Autophagy-related protein 13
  ------ inclusion threshold ------
        1.4    9.8   0.0        1.4    9.8   0.0    3.9  4  PDZ_assoc    PDZ-associated domain of NMDA receptors


Domain annotation for each model (and alignments):
>> ATG13  Autophagy-related protein 13
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  212.3   0.2   9.4e-67   8.4e-63       1     240 []      44     265 ..      44     265 .. 0.94

  Alignments for each domain:
  == domain 1  score: 212.3 bits;  conditional E-value: 9.4e-67
                 HHHHHHHHHHHHHHTT--.---------S--B-GGGEEB---HHHHHHHCCCCCS-TCTTT..--EEEEEEEETTT--TT-EEEEE-TTS-EEEEE... CS
       ATG13   1 IqnfftKaaliilqsrlt.ksssesssskklnkWFnlelddtdlfkeelrlWksvssllen.pppliievyLdlsdlssnqvlvlkdesgkrwdvdssd 97 
                 I+++f K+ l+il+srl+   s++s++++k+nkWFnle+++td++ ++++lWks++ + e+  pp+++++yLd+sdls nq l l d +  +++v    
  EPX72935.1  44 IHHCFYKTGLVILESRLNiAGSNSSREGTKRNKWFNLEVNETDVYADQFKLWKSIDMTVERkIPPMVLHTYLDMSDLSRNQKLSLFDGK--QHHVI--- 137
                 89****************73467888999***************************9999989**********************9964..44444... PP

                 ...ECCC-SEEEEEEEEEEEE-S-------------HHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHCHTT------EEEEEEECTTS----TTSB-TT CS
       ATG13  98 sekkgskkteivLErWlleldstsssetsdeaselelptvyKksivlfRsLytllrlLPayklsrklaksknsepalkigcRildgskpisskgeigls 196
                  + k+s+ ++ivLErW+++ld  ss      +++ e+ ++yKk++vlfRsLyt+++++P +kl++++++ ++++ +lk+gc +++ +    + ++i ++
  EPX72935.1 138 -DLKRSNASKIVLERWVISLDGGSS------STSVEMAVLYKKLVVLFRSLYTYTHIMPLWKLKSRINRLRAHNASLKVGCTLSSDN--LLHDDFIPIN 227
                 .3689********************......99999************************************************988..99******** PP

                 ---SCCCGT-----TTEEEEE---EEETTEEEEEEEEEES--EC CS
       ATG13 197 kpliasesnaenseehleqykftpietplGrlslsvtYRndcdF 240
                   l+++  n      +++ y+f+p++tp+G++++sv+YR+dc+F
  EPX72935.1 228 AVLSPTLGN------SIAAYSFSPVNTPMGNFRISVQYRKDCNF 265
                 ***987776......79**************************9 PP

>> PDZ_assoc  PDZ-associated domain of NMDA receptors
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.1      0.18   1.6e+03       5      27 ..       6      27 ..       3      41 .. 0.71
   2 ?    9.8   0.0   0.00016       1.4      10      44 ..     482     516 ..     477     523 .. 0.87
   3 ?   -3.0   0.1       1.5   1.4e+04      16      49 ..     568     605 ..     564     613 .. 0.44
   4 ?   -3.0   2.0       1.5   1.4e+04      16      40 ..     660     684 ..     616     717 .. 0.69

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.18
   PDZ_assoc  5 vylnDsYaPPDltssysqhvdnh 27
                 +l  +Y+ PD  ++ s  +d+ 
  EPX72935.1  6 THLPPMYSAPDGHNGAS-PIDSS 27
                578889*******9955.45554 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00016
   PDZ_assoc  10 sYaPPDltssysqhvdnhishssylgssesksasl 44 
                 +YaP D  s++ q +dnh  h +  g+s+s+s+sl
  EPX72935.1 482 EYAPRDDLSGFIQLLDNHAQHLQHYGESKSESSSL 516
                 7********************99999999888665 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 1.5
   PDZ_assoc  16 ltssysqhvdnhishss....ylgssesksaslppetp 49 
                 l++s +  +  h+ +       ++++   s sl p +p
  EPX72935.1 568 LANSNPHILHDHTLSALcsrlSFSEKPADSISLSPLSP 605
                 55554444444443332111122222222234556555 PP

  == domain 4  score: -3.0 bits;  conditional E-value: 1.5
   PDZ_assoc  16 ltssysqhvdnhishssylgssesk 40 
                 +++s s+++d  +++ sy  ++++ 
  EPX72935.1 660 YKTSLSKSLDHSLTSASYQATKTPA 684
                 4555566666666666665555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (754 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       349  (0.0194657); expected 358.6 (0.02)
Passed bias filter:                      259  (0.0144459); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.28s 00:00:00.89 Elapsed: 00:00:00.47
# Mc/sec: 4860.78
//
Query:       EPX72936.1  [L=872]
Description: ribosome biogenesis protein Noc1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.4e-48  163.5   0.1    4.4e-48  163.5   0.1    4.0  4  CBF       CBF/Mak21 family


Domain annotation for each model (and alignments):
>> CBF  CBF/Mak21 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1      0.46   8.3e+03      71     107 ..      88     127 ..      88     145 .. 0.48
   2 !    3.6   1.3    0.0035        62       3     141 ..     211     360 ..     209     393 .. 0.58
   3 !  163.5   0.1   2.5e-52   4.4e-48       2     170 .]     410     603 ..     409     603 .. 0.92
   4 ?  -11.8  12.4         1   1.8e+04     154     154 ..     803     803 ..     703     867 .. 0.62

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 0.46
         CBF  71 KRllqlalha.ppsfalgllallsellk..hppklkalle 107
                 KR++q++++   +s  +++l+ll +     + + l++ll 
  EPX72936.1  88 KRMMQTLISSgTTSDRISALTLLVQESPihAAKPLESLLA 127
                 7888844444344444444444433222234445555555 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.0035
         CBF   3 qaLvllfqllskq.kqsellsasdRFyraLYrkLldpelltsskra.lllnllykalkadkpvkrvaAFvKRllqlalhappsfalgllallsellkhp 99 
                 q L+++f+ll+++ +q+   ++     r L +kL d++   +sk + l+l+l  ++    +   +v+    R++ + ++  +s    +++l +++l+h+
  EPX72936.1 211 QMLSTMFDLLKGKpEQE---QN---LLRLLVNKLGDKDNKIASKASyLILQLEASHP---AMKFIVTKELERFAFAPTTSRTSHYYTMITLNQTVLTHK 300
                 67888888888864222...24...78888888877776666665424444444444...223334444444444444557777888999999999955 PP

         CBF 100 pkl.kalle..........................ekfkdvkeeeeeekkeek...kkskaesgvYdptkrd 141
                 ++   +ll                           ++ +d            +   kks+++++  d +k+ 
  EPX72936.1 301 QTDvANLLIeiyfvfftkllfafekeenankedekKELHD------------AkdnKKSQKRKKDADIRKEA 360
                 4331444447999999999988865544333222222222............12222222223334444433 PP

  == domain 3  score: 163.5 bits;  conditional E-value: 2.5e-52
         CBF   2 vqaLvllfqllskqkqsellsasdRFyraLYrkLldpelltsskralllnllykalkadkpvkrvaAFvKRllqlalhappsfalgllallsellkhpp 100
                 +q+L+l+fq +s+ ++s    + dRFy+ LY++Lldp+l tssk++l+lnllyk+l  d++++rv AF+KR++q+a+ ++ps + g+  ++++l  ++p
  EPX72936.1 410 IQVLMLIFQASST-RDS----VPDRFYKSLYESLLDPRLPTSSKHSLYLNLLYKSLIVDNNIARVRAFIKRMVQIAAWQSPSLVTGFFHVIQQLEDSNP 503
                 8************.677....99**************************************************************************** PP

         CBF 101 klkalle............ekfkdvkeeeeeekkeek..........kkskae............sgvYdptkrdpeysnaeasslwElsllakhfhPt 165
                 +l+ + +            e f+dv+eeee+e+++++          +    +            s++Yd +krdp+ysna++s++wE+ ++ +hfhPt
  EPX72936.1 504 SLRVMFDkpemhefdddeeEVFRDVEEEEENETSDNEknteeqdtkqE----NkeshgafakpdlSNAYDGRKRDPQYSNADRSCIWEIYPFLSHFHPT 598
                 *******************99999999988888777777776665441....04456678889999********************************* PP

         CBF 166 ValfA 170
                 V+ +A
  EPX72936.1 599 VSMLA 603
                 *9887 PP

  == domain 4  score: -11.8 bits;  conditional E-value: 1
         CBF 154 E 154
                 E
  EPX72936.1 803 E 803
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (872 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1795  (0.100117); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        78  (0.00435049); expected 17.9 (0.001)
Passed Fwd filter:                        39  (0.00217525); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.08u 0.34s 00:00:01.42 Elapsed: 00:00:00.53
# Mc/sec: 4955.42
//
Query:       EPX72937.1  [L=338]
Description: mannosyltransferase complex subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   8.6e-100  333.5   0.0      1e-99  333.3   0.0    1.0  1  Anp1             Anp1
     0.0073   16.1   0.0      0.013   15.3   0.0    1.4  1  Glycos_transf_2  Glycosyl transferase family 2


Domain annotation for each model (and alignments):
>> Anp1  Anp1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  333.3   0.0  1.1e-103     1e-99       2     264 .]      49     304 ..      48     304 .. 0.98

  Alignments for each domain:
  == domain 1  score: 333.3 bits;  conditional E-value: 1.1e-103
        Anp1   2 vekydlnklestadaaenkekvLiltplrdaekflpeyfenllkltyphelidLaflvsdtsegdktlealeeelkklqkkkkkkrfrsitilekdfge 100
                 +  yd+n+++++ada+++ke+vLiltp+   ++f+pey++nllkltyp++li+L+f++++t++g k++++l+++++++qk  k++rf++++i+ +d+g 
  EPX72937.1  49 IVVYDMNEISASADAVRKKEEVLILTPI---ARFYPEYWKNLLKLTYPRNLITLGFIIPSTKDGTKVHRELRAAVQAVQKGPKHQRFADVKIMIQDTGL 144
                 567*************************...************************************************86666*************** PP

        Anp1 101 kisqsesdrhkvevqklRRklmaraRNsLlssaLkpehswvlwlDaDivetpktliedlishdkdvivpnvlrklpdelekeqpYDlnsWveseealel 199
                 +++qse++rh++evqk+RR+ +a +RN+Ll+s+L+p++swvlwlD+Divetp++lied++s+dkdv+v+n++++ +   ++  pYD+nsWv+s++a++l
  EPX72937.1 145 SSGQSEKQRHSLEVQKERRSKIAASRNTLLFSTLGPKTSWVLWLDSDIVETPQRLIEDMTSFDKDVLVANCYKRHN---GNLIPYDFNSWVDSDHARNL 240
                 *************************************************************************994...579***************** PP

        Anp1 200 akkldeddvivegyaelatkrvhlaklrdengdpeeeveLDgVGgvsilvkaevfrqGamFpaft 264
                 ak +++dd+++egyaelat+r ++a+++d ngdp++ +eL+gVG+++++vka+v+r+Ga+Fp+f+
  EPX72937.1 241 AKGMGKDDILLEGYAELATYRLLMAHTYD-NGDPRTLMELNGVGTTALMVKANVHRDGAVFPTFP 304
                 ****************************9.9********************************96 PP

>> Glycos_transf_2  Glycosyl transferase family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   1.5e-06     0.013      60     119 ..     159     218 ..     148     255 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 1.5e-06
                      EESSS-HHHHHHHHHHHH--SS...EEEEEESSEEE-TTHHHHHHHHHHH.TTCEEEEEEEEE CS
  Glycos_transf_2  60 rreenvGkagalnaglraatgd...yilflDaDdepdpdwleklvealekdgadvvlgqrpri 119
                      ++e++   a+++n+ l  + g    ++l+lD+D + +p++l + +  ++k   dv +++ +++
       EPX72937.1 159 QKERRSKIAASRNTLLFSTLGPktsWVLWLDSDIVETPQRLIEDMTSFDK---DVLVANCYKR 218
                      6678889*******************************766555555555...4444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       610  (0.0340231); expected 358.6 (0.02)
Passed bias filter:                      549  (0.0306208); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2405.18
//
Query:       EPX72938.1  [L=474]
Description: septin Spn1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   9.9e-101  336.7   0.1   9.9e-101  336.7   0.1    1.6  2  Septin        Septin
    2.6e-06   27.1   7.6    0.00042   19.9   0.1    3.1  3  GTP_EFTU      Elongation factor Tu GTP binding domain
      4e-06   26.9   0.0      1e-05   25.6   0.0    1.8  1  MMR_HSR1      50S ribosome-binding GTPase
    1.1e-05   25.4   7.2    0.00013   21.9   0.7    2.9  3  RsgA_GTPase   RsgA GTPase
    0.00026   20.4   0.0    0.00026   20.4   0.0    2.1  2  AIG1          AIG1 family
     0.0016   18.8   0.0     0.0046   17.3   0.0    1.7  1  AAA_16        AAA ATPase domain
     0.0021   18.4   0.0      0.015   15.6   0.0    2.3  2  AAA_22        AAA domain
     0.0037   16.7   0.0     0.0074   15.7   0.0    1.4  1  FtsK_SpoIIIE  FtsK/SpoIIIE family
     0.0049   16.6   0.0       0.01   15.6   0.0    1.4  1  AAA_29        P-loop containing region of AAA domain
     0.0069   15.6   1.0      0.021   14.0   1.0    1.9  1  G-alpha       G-protein alpha subunit
     0.0081   16.7   0.0     0.0081   16.7   0.0    2.7  2  ABC_tran      ABC transporter
     0.0099   15.6   0.2       0.91    9.3   0.0    3.1  3  PduV-EutP     Ethanolamine utilisation - propanediol utilisat
  ------ inclusion threshold ------
      0.011   15.8   0.2      0.011   15.8   0.2    2.7  3  Dynamin_N     Dynamin family
      0.014   14.4   0.9       0.27   10.2   0.0    2.6  2  IIGP          Interferon-inducible GTPase (IIGP)
      0.016   15.3   6.0      0.035   14.2   0.0    2.6  2  DUF87         Helicase HerA, central domain
      0.021   15.0   0.0      0.048   13.9   0.0    1.7  1  Roc           Ras of Complex, Roc, domain of DAPkinase
      0.045   12.9   0.0      0.074   12.1   0.0    1.3  1  DUF1719       Domain of unknown function (DUF1719)
      0.054   13.7   4.7       0.11   12.6   4.7    1.4  1  MnmE_helical  MnmE helical domain
      0.068   12.5   0.0      0.068   12.5   0.0    2.5  3  Gtr1_RagA     Gtr1/RagA G protein conserved region


Domain annotation for each model (and alignments):
>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  336.7   0.1    1e-103  9.9e-101       1     279 [.      98     378 ..      98     380 .. 0.96
   2 ?   -2.7   0.8       2.9   2.7e+03      28     177 ..     417     450 ..     401     470 .. 0.51

  Alignments for each domain:
  == domain 1  score: 336.7 bits;  conditional E-value: 1e-103
                 XEEEEEEEEEEBTTSSCCCCCCTTSSSS------------...------S-EEEEEEEEETTCEEEEEEEE---BSSSSSHHCCCHHHHHHHHHHHHHH CS
      Septin   1 kgieftlmvvGesglGkttlintlfetdlieeekleease...kkkktveikkkkvvieedgvklnltviDtpgfGdavdnskswepiveyideqfeey 96 
                 +g+ f+lmv Gesg Gk+tl+ntl+++d+ +  +++  se     ++tvei + +v i e+g++l++ viDtpgfGd+vdn+++wepiv+ i+ +++ey
  EPX72938.1  98 QGFVFNLMVLGESGSGKSTLVNTLLNRDVHKLGSQPLSSEqgiLPESTVEIVNDTVHIMENGINLHMSVIDTPGFGDFVDNTNCWEPIVNDIEGRYNEY 196
                 5999**************************99877777663334589**************************************************** PP

                 HHHCTSS--SS-----EEEEEEEE-TTSSSS-HHHHHHHHHHTTTS-EEEEESSGGGS-HHHHHHHHHHHHHHHHHTT--------SSSS-SCCHHHHH CS
      Septin  97 lreesklkRkkivDkRvHaclyfisPtghglkpldvelmkklsekvnliPviaKaDtltkeElkefKkkireeleeeeikiyklpdeeededeeakels 195
                 l+ e++l +++i+D R+Hac++fi+Ptgh +  ++++++ +l+ekvn+iPviaKaDtlt+eE++  K+ + +++++++i+i+  p+++  +d e + ++
  EPX72938.1 197 LDFEKRLPKSSIKDPRIHACIFFIQPTGHAMSVMELQVLLALHEKVNIIPVIAKADTLTDEEINLSKEIVLRDIQQHNIRIFV-PSTYPMDDPESVAEN 294
                 **********************************************************************************9.99999999999**** PP

                 HHHHHC-SEEB-SSSSEEEE.SSSEEEEEEETTEEEETT-TTT-SCCHHHHHHHHHCHHHHHHHHHHTHHHHHHHHHH-XXXXXX CS
      Septin 196 eklkeslPfaivgsneliek.kgkkvrgRkypWGvvevenekhsdFlkLrklllkthledLkevteellYetyRseklsklkeka 279
                  ++ +++Pfai++sn+ + + +g++vr+RkypWG+ve++ne+hsdF kLr++l++thle+Lk++t++ lYe yR+++l k+ +++
  EPX72938.1 295 AEIMSRIPFAIIASNSFVVNnDGRRVRARKYPWGIVEIDNEDHSDFPKLREMLIRTHLEELKDRTND-LYEAYRTDRLIKSGISQ 378
                 ****************98887*********************************************9.9*********9987765 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 2.9
                 S------------------S-EEEEEEEEETTCEEEEEEEE---BSSSSSHHCCCHHHHHHHHHHHHHHHHHCTSS--SS-----EEEEEEEE-TTSSS CS
      Septin  28 dlieeekleeasekkkktveikkkkvvieedgvklnltviDtpgfGdavdnskswepiveyideqfeeylreesklkRkkivDkRvHaclyfisPtghg 126
                 +++e+e   ++se                                                                                      
  EPX72938.1 417 KVKEKEDRLNQSE-------------------------------------------------------------------------------------- 429
                 4444433332222...................................................................................... PP

                 S-HHHHHHHHHHTTTS-EEEEESSGGGS-HHHHHHHHHHHHHHHHHTT--- CS
      Septin 127 lkpldvelmkklsekvnliPviaKaDtltkeElkefKkkireeleeeeiki 177
                                               +El+   + +++ le++++++
  EPX72938.1 430 ------------------------------KELRVRHRDMKAALEKQKVDL 450
                 ..............................222233333333333333333 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       5.9   5.5e+03      23      75 ..      22      74 ..      18      74 .. 0.66
   2 !   19.9   0.1   4.5e-07   0.00042       4      87 ..     102     179 ..     100     181 .. 0.73
   3 !   10.2   1.2   0.00043      0.41     107     154 ..     226     298 ..     212     463 .. 0.76

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 5.9
                HHHHTTSSCHHHHHHHHHSTHCHSHHHHHHTSCSSCEEEEEETTCSSEEEEEE CS
    GTP_EFTU 23 LlyktgaiskkgekaeeervlDtlkeErergiTiksaaisleketkkylinli 75
                L+ k++ +s ++++++ ++  D  + Ere   + + + +s+ + t+++++++i
  EPX72938.1 22 LTSKSESDSYAANDNGVQNDGDVESSEREIPSSHNEQEASVAQPTSDHRVSII 74
                56666666666666666666777788887777777777777766777776665 PP

  == domain 2  score: 19.9 bits;  conditional E-value: 4.5e-07
                 EEEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHHHHHSTHCHSHHHHHHTS....CSSCEEEEEE..TTCSSEEEEEEEESSSGGGHHHH CS
    GTP_EFTU   4 rnigiighvDhGKtTLtdrLlyktgaiskkgekaeeervlDtlkeErergi....Tiksaaisle..ketkkylinliDtPGHvdFskev 87 
                  n++++g   +GK+TL+ +Ll  + +++k          l +++   e+gi    T+++ + +++  +++ + ++++iDtPG  dF++++
  EPX72938.1 102 FNLMVLGESGSGKSTLVNTLL--NRDVHK----------LGSQPLSSEQGIlpesTVEIVNDTVHimENGINLHMSVIDTPGFGDFVDNT 179
                 699******************..444445..........4455555555551111555444444465799*****************997 PP

  == domain 3  score: 10.2 bits;  conditional E-value: 0.00043
                 STHHHHHHHHHHHHTTTEEEEEEESCGST.HHHHHHHHHHHHHHHHHH........................H CS
    GTP_EFTU 107 vepqteevlrlalkegvpiivfiNKmDrl.kaelkeiveevkqklsrk........................e 154
                  ++  e  + lal e+v+ii +i K+D l ++e++ ++e v ++++++                        +
  EPX72938.1 226 AMSVMELQVLLALHEKVNIIPVIAKADTLtDEEINLSKEIVLRDIQQHnirifvpstypmddpesvaenaeiM 298
                 56666777899******************98999999998888887667777777777755544444433330 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.0   1.1e-08     1e-05       2      57 ..     104     185 ..     103     267 .. 0.68

  Alignments for each domain:
  == domain 1  score: 25.6 bits;  conditional E-value: 1.1e-08
                 EEEEESTTSSHHHHHHHHHT........S..TEEESSSTTSSSSEEEEEEE..ETT..EEEEEEECGGC............S CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltg........e..kaivsdkpgtTrdinegrvk..lkg..keielvDtpGl............i 57 
                  +++G + +GKStL+n+l++        +   ++ +  p  T +i+  +v+  ++g   ++ ++DtpG+            i
  EPX72938.1 104 LMVLGESGSGKSTLVNTLLNrdvhklgsQplSSEQGILPESTVEIVNDTVHimENGinLHMSVIDTPGFgdfvdntncwepI 185
                 6899***************9655555532445566777788888888887754222225689******65555555544441 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.7   1.4e-07   0.00013     103     163 ..     105     174 ..      95     176 .. 0.70
   2 !    6.3   0.0    0.0088       8.3      39      85 ..     234     283 ..     215     300 .. 0.74
   3 ?   -2.7   0.2         5   4.8e+03      43      66 ..     435     458 ..     404     466 .. 0.60

  Alignments for each domain:
  == domain 1  score: 21.9 bits;  conditional E-value: 1.4e-07
                  EEECSTTSSHHHHHHHHCTT-----S--------------SEEE....EEETT.....TEEEESS-SSSS CS
  RsgA_GTPase 103 vlvGqSGvGKStLinallpelelktgevseklgrGkhTTtavel....lelae.....gglliDtPGfre 163
                  +++G+SG GKStL+n+ll+++  k g+   ++++G     +ve+    +++ e        +iDtPGf  
   EPX72938.1 105 MVLGESGSGKSTLVNTLLNRDVHKLGSQPLSSEQGILPESTVEIvndtVHIMEnginlHMSVIDTPGFGD 174
                  679****************9988888877777777544444443111145555233334569*****976 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0088
                  HHHHHHTT-EEEEEEE-GGG--HHH...HHHHHHHHHHHTTSEEEE--TT CS
  RsgA_GTPase  39 LvlaeekgiepvivlnKiDlleeee...eleelkeelealgyevllvsak 85 
                  ++la +++++++ v+ K+D l++ee   + e +  ++++ ++++++ s+ 
   EPX72938.1 234 VLLALHEKVNIIPVIAKADTLTDEEinlSKEIVLRDIQQHNIRIFVPSTY 283
                  4556677888888999*********8777777788888888888877665 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 5
                  HHTT-EEEEEEE-GGG--HHHHHH CS
  RsgA_GTPase  43 eekgiepvivlnKiDlleeeeele 66 
                   +++++  +   K+Dl++++++l+
   EPX72938.1 435 RHRDMKAALEKQKVDLMDRKNRLT 458
                  344555555556677776666444 PP

>> AIG1  AIG1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0   2.7e-07   0.00026       2      65 ..     103     178 ..     102     194 .. 0.63
   2 ?   -1.8   1.1       1.8   1.7e+03     148     179 ..     402     433 ..     392     466 .. 0.73

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 2.7e-07
                 EEEEESSTTSSHHHHHHHHHTS--.......SS--...TTTS---SS-EEEEEEETT..EEEEEEE--SCCCTTCC CS
        AIG1   2 tivlvGktgnGkSaTgNsilgkka.......Fesk...lsaqsvtkkcqkksrtwdg..kkinViDTPglfdlsvs 65 
                 +++++G +g+GkS+ +N++l++++        +s+   l +++v     +++ +++g   +++ViDTPg  d  ++
  EPX72938.1 103 NLMVLGESGSGKSTLVNTLLNRDVhklgsqpLSSEqgiLPESTVEIVNDTVHIMENGinLHMSVIDTPGFGDFVDN 178
                 799****************88888555544444441112233333333444447788334568******8665543 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 1.8
                 HHHHHTTTSEEEEETTHHHHHHHHHHHHHHHH CS
        AIG1 148 evlkecgnRvvlfnnktaskeekeeQvkelle 179
                 +++k+  + +v+f  k ++ke++ +Q ++ l+
  EPX72938.1 402 KLMKMEAEMKVIFSQKVKEKEDRLNQSEKELR 433
                 57777778889999999999998888877655 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   4.9e-06    0.0046      25      46 ..     102     123 ..      86     140 .. 0.84

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 4.9e-06
      AAA_16  25 elvllsGesGvGKsslvrellr 46 
                  ++++ GesG+GKs+lv++ll+
  EPX72938.1 102 FNLMVLGESGSGKSTLVNTLLN 123
                 5789***************996 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   1.6e-05     0.015       8      30 ..     104     126 ..     103     162 .. 0.84
   2 ?   -0.9   0.0       1.9   1.8e+03      96     118 ..     331     361 ..     318     373 .. 0.70

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 1.6e-05
      AAA_22   8 lvvtGesGtGKTtllrrlleqld 30 
                 l+v GesG+GK+tl+++ll++++
  EPX72938.1 104 LMVLGESGSGKSTLVNTLLNRDV 126
                 6899****************974 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 1.9
      AAA_22  96 iiDEaqhlr..s......eealeeLrsllnl 118
                  iD+ +h +  +       ++leeL+++ n+
  EPX72938.1 331 EIDNEDHSDfpKlremliRTHLEELKDRTND 361
                 5777777655524467778999999999885 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   7.8e-06    0.0074      41      60 ..     103     122 ..      88     123 .. 0.92

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 7.8e-06
                   SEEEE--TTSSHHHHHHHHH CS
  FtsK_SpoIIIE  41 hllvaGatgsGKStalntLi 60 
                   +l+v+G +gsGKSt +ntL+
    EPX72938.1 103 NLMVLGESGSGKSTLVNTLL 122
                   99****************97 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   1.1e-05      0.01      24      40 ..     103     119 ..      90     123 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 1.1e-05
      AAA_29  24 atlltGpsGsGKSTllD 40 
                 + ++ G+sGsGKSTl+ 
  EPX72938.1 103 NLMVLGESGSGKSTLVN 119
                 57899**********95 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   1.0   2.3e-05     0.021      22      90 ..     100     236 ..      88     472 .. 0.61

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 2.3e-05
                 .EEEEEEEESTTSSHHHHHHHHHHHCS----HHHHHCCHHHHHHHHHHHHHHHHHHHHHTT...................................... CS
     G-alpha  22 revkllllGqseSGKsTilkqlkllykkgfseeelatwraviqlnivrsiktilealesleselsesf............................... 89 
                 + ++l++lG+s+SGKsT+++ l     ++   + l + + ++ + +v+ +++ + ++e+ +++l  s+                               
  EPX72938.1 100 FVFNLMVLGESGSGKSTLVNTLLNRDVHKLGSQPLSSEQGILPESTVEIVNDTVHIMEN-GINLHMSVidtpgfgdfvdntncwepivndiegryneyl 197
                 5679****************997544444444444444555555566656666665555.333322223444444445555555554555455555555 PP

                 ......................................H CS
     G-alpha  90 ......................................e 90 
                                                        
  EPX72938.1 198 dfekrlpkssikdprihaciffiqptghamsvmelqvlL 236
                 555555555555555555555555555544444444440 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   8.5e-06    0.0081      14      35 ..     104     125 ..     102     163 .. 0.84
   2 ?   -1.4   2.9       3.2     3e+03      46      67 ..     395     416 ..     241     466 .. 0.64

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 8.5e-06
                 EEEEESTTSSHHHHHHHHTTSS CS
                 xxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  14 vaivGenGaGKStLlkllagll 35 
                 + ++Ge+G+GKStL+++l++  
  EPX72938.1 104 LMVLGESGSGKSTLVNTLLNRD 125
                 5789*************98765 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 3.2
                 TCEGGGB-HHHCCHCEEEE-SS CS
                 xxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  46 gkdlkeqeleslrkeigvlpqe 67 
                 ++ l++++l ++++e++v++ +
  EPX72938.1 395 ERALHDEKLMKMEAEMKVIFSQ 416
                 3334444555555555555555 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   0.0   0.00097      0.91       4      32 ..     104     132 ..     102     142 .. 0.82
   2 ?    2.0   0.0      0.17   1.6e+02      34      53 ..     160     181 ..     156     189 .. 0.78
   3 ?   -0.3   0.0      0.87   8.2e+02      91     114 ..     243     265 ..     186     278 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00097
   PduV-EutP   4 illiGkvgsGKttLtqalkgeelkYkktq 32 
                 ++++G++gsGK tL ++l +++++    q
  EPX72938.1 104 LMVLGESGSGKSTLVNTLLNRDVHKLGSQ 132
                 79****************99988765555 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.17
   PduV-EutP  34 iefsdeviDtPG..eylenrkl 53 
                 i+++ +viDtPG  ++++n + 
  EPX72938.1 160 INLHMSVIDTPGfgDFVDNTNC 181
                 789999*****64488888765 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.87
   PduV-EutP  91 eviGiitkidlaedeenieaveel 114
                 ++i +i k+d+  ++e+i+ ++e 
  EPX72938.1 243 NIIPVIAKADTL-TDEEINLSKEI 265
                 689999999999.67788887765 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.8   0.2   1.1e-05     0.011       2      31 ..     105     134 ..     104     142 .. 0.90
   2 ?    0.9   0.0      0.43   4.1e+02     101     113 ..     162     174 ..     143     228 .. 0.86
   3 ?   -3.0   0.8       6.9   6.5e+03      69      70 ..     429     430 ..     390     467 .. 0.49

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1.1e-05
                 EEEEBTTTTHHHHHHHHHTS--S---SSS- CS
   Dynamin_N   2 avvGsqSsGKSSvlnaLlgedilprgpnpt 31 
                 +v+G+  sGKS+++n Ll +d+   g++p 
  EPX72938.1 105 MVLGESGSGKSTLVNTLLNRDVHKLGSQPL 134
                 79*******************999888876 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.43
                 -SEEEEE---B-S CS
   Dynamin_N 101 kgltlvDlPGlds 113
                  +++++D+PG+ +
  EPX72938.1 162 LHMSVIDTPGFGD 174
                 57889*****976 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 6.9
                 HH CS
   Dynamin_N  69 re 70 
                 ++
  EPX72938.1 429 EK 430
                 11 PP

>> IIGP  Interferon-inducible GTPase (IIGP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   0.00029      0.27      36      55 ..     102     121 ..      97     128 .. 0.90
   2 ?    1.7   0.0      0.11     1e+02     196     215 ..     330     349 ..     310     385 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00029
                 EEEEEEESTTSSHHHHHHHH CS
        IIGP  36 lkiavtGdsGnGkssFinaL 55 
                  +++v G+sG+Gks+ +n+L
  EPX72938.1 102 FNLMVLGESGSGKSTLVNTL 121
                 6889***************9 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.11
                 BBTTBTTSTTHHHHHHHHHH CS
        IIGP 196 vsnldvsayDFPkLretLlk 215
                 v   +  + DFPkLre L++
  EPX72938.1 330 VEIDNEDHSDFPKLREMLIR 349
                 555566678********986 PP

>> DUF87  Helicase HerA, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   3.7e-05     0.035      28      49 ..     106     127 ..     103     134 .. 0.86
   2 ?    0.8   3.5      0.47   4.4e+02     116     188 ..     378     462 ..     347     472 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3.7e-05
       DUF87  28 ilgsTGsGKSntvavLleelle 49 
                 +lg++GsGKS++v  Ll++ + 
  EPX72938.1 106 VLGESGSGKSTLVNTLLNRDVH 127
                 9****************98664 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.47
       DUF87 116 vqrsvleealdqakakeekeklssdepveklleelk...............kekeelrklknqaiarlldkledllrkggsfsnsstd 188
                 + +sv++e+   ak   e+e++  de + k++ e+k               ++++elr   ++ +a+l++++ dl+++++   ++s++
  EPX72938.1 378 QDHSVFREVNPAAK--LEEERALHDEKLMKMEAEMKvifsqkvkekedrlnQSEKELRVRHRDMKAALEKQKVDLMDRKNRL-TQSKS 462
                 56677777778777..888888888888889999999999888888888766666777777777888888888888877777.33333 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0     5e-05     0.048       2      27 ..     104     129 ..     103     181 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 5e-05
                 EEEESSTTSSHHHHHHCHCT-CCC-E CS
         Roc   2 vvlvGdsgvGKtsllkrfvedkfsek 27 
                 ++++G+sg+GK++l++ ++++++++ 
  EPX72938.1 104 LMVLGESGSGKSTLVNTLLNRDVHKL 129
                 79*****************9998765 PP

>> DUF1719  Domain of unknown function (DUF1719)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   7.9e-05     0.074      94     168 ..     207     280 ..     192     301 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 7.9e-05
     DUF1719  94 sleerGveaklifvyedrkapeksfvlglmLrlsestdivgiiikclqlltphfkstaeavrkeltqLptqdfsw 168
                 s+++  + a+++f++   +a +  + l+++L l e ++i+ +i+k   l+  +++   e v ++++q + + f  
  EPX72938.1 207 SIKDPRIHACIFFIQPTGHA-MSVMELQVLLALHEKVNIIPVIAKADTLTDEEINLSKEIVLRDIQQHNIRIFVP 280
                 66778899999999988765.67899****************************************988887764 PP

>> MnmE_helical  MnmE helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   4.7   0.00012      0.11      51     156 ..     331     448 ..     329     469 .. 0.56

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00012
                   xxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......................xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  MnmE_helical  51 aiDFpe.edleelseeelaekleelkeelekllatakrgellreGik......................DllkekeekeeeevlkiSaktgegieeL 124
                   +iD ++  d ++l e  +++ leelk++ ++l + +++ +l+++Gi+                      D                     e++ ++
    EPX72938.1 331 EIDNEDhSDFPKLREMLIRTHLEELKDRTNDLYEAYRTDRLIKSGISqdhsvfrevnpaakleeeralhD---------------------EKLMKM 406
                   7888775679999999*******************************86665555555554444444442.....................334444 PP

                   xxxxxxxx.x...xxxxx.......xxxxxxxx.xxxxxxxxxx RF
  MnmE_helical 125 eeaikele.l...eeiee.......eplltnaR.hkealekale 156
                   e+++k ++ +   e   e       ++l +++R  k+alek + 
    EPX72938.1 407 EAEMKVIFsQkvkE-K-EdrlnqseKELRVRHRdMKAALEKQKV 448
                   44443322121210.1.112222222222222212233333333 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   7.2e-05     0.068       2      65 ..     104     179 ..     103     193 .. 0.74
   2 ?   -1.9   0.0       1.8   1.7e+03     104     144 ..     234     265 ..     219     284 .. 0.54
   3 ?   -1.8   0.8       1.7   1.6e+03      98     211 ..     425     461 ..     404     472 .. 0.50

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 7.2e-05
   Gtr1_RagA   2 vLLmGksgsGKtsmrsiiFdnylardtlrlgati.............dveksevrflg...nltlnlwDcgGqeafveey 65 
                 ++ +G+sgsGK+++ + +    l rd+ +lg+               ++ +++v++++   nl+++++D +G  +fv+++
  EPX72938.1 104 LMVLGESGSGKSTLVNTL----LNRDVHKLGSQPlsseqgilpestvEIVNDTVHIMEngiNLHMSVIDTPGFGDFVDNT 179
                 7899*******9987655....455555555544455555555555599999999998334589**************96 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.8
   Gtr1_RagA 104 alrqyspeakvfvlihKmDliqedereeifeerkeeireei 144
                  l   ++++++   i K D ++++e +         +++ei
  EPX72938.1 234 VLLALHEKVNIIPVIAKADTLTDEEIN---------LSKEI 265
                 455555666666666666666544322.........22222 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 1.7
   Gtr1_RagA  98 lkeilealrqyspeakvfvlihKmDliqedereeifeerkeeireeieklekeeiqffaTSiwdeslykAfssivqklipnldvleelLkklaeaieae 196
                 l+++ ++lr  ++++k      K+Dl+++++r                                                                   
  EPX72938.1 425 LNQSEKELRVRHRDMKAALEKQKVDLMDRKNR------------------------------------------------------------------- 456
                 44444444444444444444444444444444................................................................... PP

   Gtr1_RagA 197 evlLferstflviat 211
                           l+ ++
  EPX72938.1 457 ----------LTQSK 461
                 ..........33333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (474 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1442  (0.0804284); expected 358.6 (0.02)
Passed bias filter:                      501  (0.0279436); expected 358.6 (0.02)
Passed Vit filter:                        84  (0.00468515); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              19  [number of targets reported over threshold]
# CPU time: 0.66u 0.29s 00:00:00.95 Elapsed: 00:00:00.44
# Mc/sec: 3266.27
//
Query:       EPX72939.1  [L=279]
Description: Sim4 and Mal2 associated protein 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.6e-16   58.7   1.7    4.3e-15   56.3   1.7    2.1  1  CENP-L    Kinetochore complex Sim4 subunit Fta1


Domain annotation for each model (and alignments):
>> CENP-L  Kinetochore complex Sim4 subunit Fta1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.3   1.7   2.4e-19   4.3e-15       2     163 .]     121     259 ..     120     259 .. 0.92

  Alignments for each domain:
  == domain 1  score: 56.3 bits;  conditional E-value: 2.4e-19
      CENP-L   2 fthLPLLllrmpaslkkavtdfLsttFDcrvspLrlssasLvsaleswlatlsvaarralqslvkdlqltlsFavppeapglktlditipaedlreflr 100
                 ft++PLLl+rm  +l + + dfL+ +FD ++ p +l+s++L ++++sw   ++        + v  + ++++++   ++p+l +l+i+i aed+   +r
  EPX72939.1 121 FTQFPLLLVRMDGKLWHRIEDFLKVQFDVQIIPRKLTSETLLKIFNSWELYVK--------NTVLSMPIEFTWS--INKPNLSNLSISIRAEDCNLWMR 209
                 99**********************************************88888........3565778888887..66999************988777 PP

      CENP-L 101 agedsseeddttndeesqpFleaLasylkkhlalnldhpavrvskvscgafvlseegRlKlas 163
                 +             ++s+ ++++  +++k+ + ++l h+ + v+k+     ++  +g++K++s
  EPX72939.1 210 S-------------SSSPCIYDTFVRHIKRCTSIDLTHHLFAVTKIVMDSGIMTASGKVKFFS 259
                 4.............45899******************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (279 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       359  (0.0200234); expected 358.6 (0.02)
Passed bias filter:                      288  (0.0160634); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 2042.93
//
Query:       EPX72940.1  [L=1029]
Description: GYF domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.8e-19   67.1   0.4    1.6e-18   66.0   0.4    1.6  1  GYF       GYF domain
  ------ inclusion threshold ------
        2.5    8.8   8.3        2.4    8.8   0.9    2.9  2  TUTF7_u4  Unstructured region 4 on terminal uridylyltransfera


Domain annotation for each model (and alignments):
>> GYF  GYF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.0   0.4   1.8e-22   1.6e-18       1      45 []     388     432 ..     388     432 .. 0.99

  Alignments for each domain:
  == domain 1  score: 66.0 bits;  conditional E-value: 1.8e-22
         GYF   1 WeYkdpqgevqGPFsseeMqkWykagYFkdgllvrrvedsefysl 45 
                 W Ykdpq+++qGPFs+ +M++Wy+agYF+ +l+v+r e++e+ysl
  EPX72940.1 388 WLYKDPQNNIQGPFSGVDMHQWYRAGYFPLSLPVKRLEEEEYYSL 432
                 *******************************************97 PP

>> TUTF7_u4  Unstructured region 4 on terminal uridylyltransferase 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   1.5     0.027   2.4e+02      39      73 ..     529     567 ..     496     572 .. 0.70
   2 ?    8.8   0.9   0.00027       2.4      10      67 ..     575     630 ..     569     641 .. 0.85

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.027
    TUTF7_u4  39 kEvsvkegklvsctp....qkakqargavetgrekvlrq 73 
                  E+  ke+k++s++p    +k  +  +av +++ekv  +
  EPX72940.1 529 DENVYKEDKHTSFSPsditNKDEKDATAVSQNKEKVYEP 567
                 58899*****99988332245555667788999998765 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00027
    TUTF7_u4  10 qEdaknqRypEnkekrskedkeiqnkttEkEvsvkegklvsctpqkakqargavetgr 67 
                 ++ +kn +  E kek+ske  e++ k    E+++ +  +++  p  +k+a +a+etg 
  EPX72940.1 575 SNLSKNLKSLELKEKQSKE--ETKPKVEPIESTAGNSDEHQSIPSVNKPASAATETGA 630
                 55567888899********..899999999999999999999*************995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1029 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1828  (0.101958); expected 358.6 (0.02)
Passed bias filter:                      475  (0.0264934); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.03u 0.34s 00:00:01.37 Elapsed: 00:00:00.49
# Mc/sec: 6329.41
//
Query:       EPX72941.1  [L=153]
Description: nascent polypeptide-associated complex beta subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-20   73.4   0.1    1.8e-20   72.7   0.1    1.4  1  NAC       NAC domain


Domain annotation for each model (and alignments):
>> NAC  NAC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.7   0.1     1e-24   1.8e-20       1      57 []      38      94 ..      38      94 .. 0.99

  Alignments for each domain:
  == domain 1  score: 72.7 bits;  conditional E-value: 1e-24
         NAC  1 ekKlrkalkklglkeipgieeVtirksdgkvlvfdnPkVqkspgsntyvvfGeaeek 57
                +kK++ al+kl+++++pgi+eV+++k+dg v+ f  P Vq+s +++t +v+G +eek
  EPX72941.1 38 DKKVQGALQKLNMQTLPGIQEVNMFKEDGGVINFRSPAVQASLPNETVAVYGRPEEK 94
                8******************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       396  (0.0220871); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.43
# Mc/sec: 1078.97
//
Query:       EPX72942.1  [L=531]
Description: WASp [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.4e-22   78.1   0.0    6.5e-22   77.6   0.0    1.2  1  WH1       WH1 domain
  ------ inclusion threshold ------
        0.1   12.5   0.1       0.25   11.2   0.1    1.7  1  WH2       WH2 motif


Domain annotation for each model (and alignments):
>> WH1  WH1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.6   0.0   7.3e-26   6.5e-22       6     109 ..      21     125 ..      17     127 .. 0.94

  Alignments for each domain:
  == domain 1  score: 77.6 bits;  conditional E-value: 7.3e-26
                 ..E.EEEEEEEEEEEEEETTTTCEEEECECEEEEEEEEETTTTEEEEEEEETT.T-SEEEEEEE-SS---B-SSSSEEEEESSSSEEEEEESSHHHHHH CS
         WH1   6 kkc.qtiasavaqvyladpakketWikakhagavslvkdstqnsyflrlvklq.dakvvieqeiyknleynqarqkfhtfederavvGLnFaseeeakk 102
                 k + +++a   a++y+a+p+ ++ W+++  +ga+ l +d+t +   l+lv++  ++ v+++qe+y+n+ey q+r++f  fe ++++++L F +e e +k
  EPX72942.1  21 KSTnKILAAGIAKLYVAYPDPNR-WSYTGLCGAAVLCYDTTLKCCWLKLVDVVgNGGVLWDQELYENFEYFQDRTFFYSFEIDQCFAALSFSDESEGSK 118
                 55557888899************.****************************9899******************************************* PP

                 HHHHHHH CS
         WH1 103 Fakkvqe 109
                 F +kv e
  EPX72942.1 119 FYRKVVE 125
                 ***9976 PP

>> WH2  WH2 motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   2.8e-05      0.25       1      16 [.     453     468 ..     453     471 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 2.8e-05
                 X-TCCHHHHHHHHHH. CS
         WH2   1 ggggRgALLadIraGs 16 
                 +++gR++L+a+Ira +
  EPX72942.1 453 PPSGRADLMASIRASG 468
                 689**********985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (531 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       775  (0.0432261); expected 358.6 (0.02)
Passed bias filter:                      457  (0.0254894); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.80u 0.27s 00:00:01.07 Elapsed: 00:00:00.44
# Mc/sec: 3638.77
//
Query:       EPX72943.1  [L=1382]
Description: phospholipid-transporting ATPase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.2e-74  249.4  22.8    4.2e-74  249.4  22.8    2.3  3  PhoLip_ATPase_C  Phospholipid-translocating P-type ATPase C-t
    1.2e-20   73.0   3.7    1.2e-20   73.0   3.7    2.2  2  PhoLip_ATPase_N  Phospholipid-translocating ATPase N-terminal
    2.4e-11   44.3   0.2    5.4e-06   26.8   0.2    3.1  2  Hydrolase        haloacid dehalogenase-like hydrolase
    3.5e-11   43.1   0.2    1.3e-10   41.3   0.0    2.0  3  Cation_ATPase    Cation transport ATPase (P-type)
    2.1e-06   27.4   0.4    6.3e-06   25.8   0.0    2.0  2  E1-E2_ATPase     E1-E2 ATPase
    0.00074   19.3   0.1     0.0023   17.7   0.1    1.8  2  Hydrolase_3      haloacid dehalogenase-like hydrolase
  ------ inclusion threshold ------
        1.1    9.5   7.6       0.29   11.4   0.4    3.3  3  DUF2304          Uncharacterized conserved protein (DUF2304)
        1.9    8.4   5.6       0.41   10.6   0.4    2.3  2  Tail_VII         Inovirus G7P protein


Domain annotation for each model (and alignments):
>> PhoLip_ATPase_C  Phospholipid-translocating P-type ATPase C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.5   0.5       6.3   1.4e+04      35      50 ..     153     168 ..     141     178 .. 0.62
   2 ?   -0.8   1.7      0.46     1e+03     175     230 ..     486     544 ..     452     569 .. 0.54
   3 !  249.4  22.8   1.9e-77   4.2e-74       1     248 [.    1061    1310 ..    1061    1311 .. 0.97

  Alignments for each domain:
  == domain 1  score: -4.5 bits;  conditional E-value: 6.3
  PhoLip_ATPase_C  35 yffyKnvvftlvqfwf 50 
                      y+ +Knv+ ++ +f+ 
       EPX72943.1 153 YNQFKNVANVFFLFLI 168
                      4455555555555443 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.46
  PhoLip_ATPase_C 175 twtl.iliililgsillyflflllyssllps..ssefygvleelfsspsfwlvlllvvv 230
                      +wt+ ++++l+++ +++  ++ ++ys+   s   +efy+  + + s p   +v +++++
       EPX72943.1 486 NWTIaLNFLLLFLMCIISGILRMVYSARQNSakVYEFYELSRATASVPVQGIVSIFTCL 544
                      45542333333333222223333444433334333333322222222222222222222 PP

  == domain 3  score: 249.4 bits;  conditional E-value: 1.9e-77
  PhoLip_ATPase_C    1 vraSDyaiaqFrfLkrLLlvhGrwsyrRisklilyffyKnvvftlvqfwfqfyngfsgqslyeswlltlynllftslpvivlgifdqdvsae 92  
                       +++SDya++qFrfL+rLLl+hGrw+y+R+s++i  ffyKnv++t+++fw+q++n f g++++++++++l+nllfts+pviv g+fd+dv+ae
       EPX72943.1 1061 AMSSDYAVGQFRFLSRLLLIHGRWNYKRTSQMISNFFYKNVIWTFTLFWYQLFNEFDGNYIFDYTYVMLFNLLFTSFPVIVSGCFDKDVDAE 1152
                       69****************************************************************************************** PP

  PhoLip_ATPase_C   93 lllkyPelYklgqknklfnlktfllwileglyqsliifflsylvlddssfs...dgktndlqlfgtlvftalvlvvnlkvaletktwtlili 181 
                        +lkyP+lYk+g  ++++n ++f+l +l+g+yqs+++f ++++v++   f    +++t +++ +g+++ + +++v+n+ ++++ ++ +li++
       EPX72943.1 1153 ASLKYPHLYKSGILRQEWNKRRFWLSVLDGVYQSMVCFGVALFVFYAGRFVsptGHQTESIEDIGLFISSPVIFVINTFILINQESLDLISV 1244
                       ********************************************88777777999************************************* PP

  PhoLip_ATPase_C  182 ililgsillyflflllyssllpsssefygvleelfsspsfwlvlllvvvvallpdllikvlkrtffp 248 
                        ++l+s++++++++ +ys+ l  s+ f + ++++ ++ +fw+v ll++vv+l+p+l   + ++ f+p
       EPX72943.1 1245 GTWLFSLIIFWFWTGVYSECLG-SNAFHKSTFRVGKTFTFWVVNLLTIVVSLFPRLSTILAQKLFYP 1310
                       *******************766.7889999**********************************999 PP

>> PhoLip_ATPase_N  Phospholipid-translocating ATPase N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.0   3.7   5.2e-24   1.2e-20       2      63 ..     116     181 ..     115     184 .. 0.85
   2 ?   -4.0   0.2       5.6   1.3e+04      47      60 ..    1288    1301 ..    1288    1302 .. 0.87

  Alignments for each domain:
  == domain 1  score: 73.0 bits;  conditional E-value: 5.2e-24
  PhoLip_ATPase_N   2 yind.reene...kkkyasNkIsTsKYtlltFlpknLfeqFrrvaNlYFLviailqliPqisplsp 63 
                      y+n+ ++e++   k+ ++sNkI+T+ Yt l+F+pknL++qF++vaN++FL++++lq+iP++++ +p
       EPX72943.1 116 YVNHiPDEHAnlpKQTFPSNKIRTTMYTPLNFVPKNLYNQFKNVANVFFLFLILLQCIPTFAARHP 181
                      666643333346678********************************************9987665 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 5.6
  PhoLip_ATPase_N   47 LviailqliPqisp 60  
                       L++++++l+P +s+
       EPX72943.1 1288 LLTIVVSLFPRLST 1301
                       78999*****9997 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.2   2.4e-09   5.4e-06       2     176 ..     600     937 ..     599     956 .. 0.76
   2 !   13.1   0.0   3.9e-05     0.087     172     210 .]    1008    1047 ..     988    1047 .. 0.84

  Alignments for each domain:
  == domain 1  score: 26.8 bits;  conditional E-value: 2.4e-09
                 SEEEEESBTTTBCHHHHHHHHHHHHCHHHHHHHHHH...HHCHHHHHHHHHHHHHHHHHHHHHHETTTE....................HHHHTHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....................xxxxxxxxxx RF
   Hydrolase   2 ktvvfDkdGTLttgepsvedvivsaalalaaaletg...sehpigkalvaaakarsgaltgfatfigrg....................ayaigkpewl 77 
                 + v+ Dk+GTLt+  +  ++++       ++a   +    ++  g+a  +  ++++++  ++ ++   g                    +         
  EPX72943.1 600 EYVFSDKTGTLTQNVMNFRRTTING-EVYGEAYTDAtrgFDKAAGRADSKRLHQIEEDRNEMIKLSKYGnpktssfvssalvkelqsptE--------- 688
                 66899**********9999988888.2222222222334444444444444444444444444433333444333433333333333331......... PP

                 HHHHCHHHHHHHHHHHHHHCHHHHHH......................................................................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx......................................................................... RF
   Hydrolase  78 taldippdlgaaigsaqsqgrtvall......................................................................... 103
                                       + ++                                                                         
  EPX72943.1 689 ---------------------QSEYCkkfltvlslchsvvtdgngeslvynsqspdeealvkgacnlgfvlkstknkryivevlgkrnrfqvldiipft 766
                 .....................33333555555556666666666666666666666666667888888888888999999999999************* PP

                 ................................................................................................... CS
                 ................................................................................................... RF
   Hydrolase 104 ................................................................................................... 103
                                                                                                                    
  EPX72943.1 767 sarkrmsiiirdrnneiylyckgadsvilnklaennsseliekttqdlslfaaegfrtlciaerklekneylewkvkfneansalhnrnekidqvsnli 865
                 *************************************************************************************************** PP

                 ..TTHHHHHHHHHHTHHBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTGGGESEEEEHHCESSTTTSH CS
                 ..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 104 ..qaralavftiadplkvkpeaaeavasLkaagievvlltgdnpetaeraanqlGddyfdaviasdietvakpsp 176
                   +  +l+  +i+d+  + +++ e++  L +agi++++ltgd  eta  +   ++      +i ++++t+++p  
  EPX72943.1 866 erDLSLLGGTAIEDK--LQEGVPETIDLLSKAGIKLWVLTGDKVETATNIGYSCNLLESGMSIIRIDSTFSEP-E 937
                 *999***********..******************************99988888444477777777778877.3 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 3.9e-05
                  TTTSHHHHHHHHHHHTST.GGGEEEEESSHHHHHHHHHTT CS
                  xxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  172 akpspegkvaaireLqgk.peevamVGDgvnDaaalaaAg 210 
                    +sp++k a++   + +    ++++GDg+nD++++++A+
  EPX72943.1 1008 CRVSPSQKAAVVSLVKRSlDVTTLAIGDGANDVSMIQQAD 1047
                  5699***********94444469***************98 PP

>> Cation_ATPase  Cation transport ATPase (P-type)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.3   0.0   5.6e-14   1.3e-10       3      87 ..     703     797 ..     701     800 .. 0.78
   2 ?   -3.8   0.0       6.2   1.4e+04      10      35 ..     833     858 ..     826     876 .. 0.76
   3 ?   -4.1   0.0       7.8   1.8e+04      16      27 ..     899     910 ..     893     911 .. 0.84

  Alignments for each domain:
  == domain 1  score: 41.3 bits;  conditional E-value: 5.6e-14
  Cation_ATPase   3 cNsaafsensekdevkllGnktEsALlvlaekl............gldteelreetkkvqeipFnssrKrmsvvlklepekkvrlyvKGApeiilk 86 
                    c+s      + ++ v  + +++E AL++ a +l              ++   r++++ + +ipF+s rKrms++++ + ++++ ly+KGA  +il+
     EPX72943.1 703 CHSVVT-DGNGESLVYNSQSPDEEALVKGACNLgfvlkstknkryIVEVLGKRNRFQVLDIIPFTSARKRMSIIIRDR-NNEIYLYCKGADSVILN 796
                    555555.44455556667899************6666665555555555555666*********************95.***************98 PP

  Cation_ATPase  87 r 87 
                    +
     EPX72943.1 797 K 797
                    6 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 6.2
  Cation_ATPase  10 ensekdevkllGnktEsALlvlaekl 35 
                    e++e+ e+k+  n+  sAL +  ek+
     EPX72943.1 833 EKNEYLEWKVKFNEANSALHNRNEKI 858
                    67788888888888889988777666 PP

  == domain 3  score: -4.1 bits;  conditional E-value: 7.8
  Cation_ATPase  16 evkllGnktEsA 27 
                     + l+G+k E+A
     EPX72943.1 899 LWVLTGDKVETA 910
                    6889******99 PP

>> E1-E2_ATPase  E1-E2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   0.0   2.8e-09   6.3e-06      18     142 ..     324     512 ..     308     560 .. 0.75
   2 ?   -3.0   0.3         2   4.4e+03     145     160 ..    1272    1297 ..    1241    1299 .. 0.56

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 2.8e-09
                   EEGGG--TTSEEEEETT-B--SEEEEEE.....E-SEEE-TTTS---S-EE-............................................. CS
  E1-E2_ATPase  18 idakelvpGDivllkagdrvpaDgrive.....gsaevdesaLTGEslpvek............................................. 64 
                   +  k++++GDiv ++a++ +paD  i++     g + v++  L GE    +k                                             
    EPX72943.1 324 VYRKKIQVGDIVRVRANEAIPADLLILStenkeGVCYVETKNLDGETNLKDKyslystkecrselecssasfwiqseephsdlynlvgvlktkvsdn 420
                   55689***********************555444449***************999999999999999999999999999999999999999999988 PP

                   ................G-TTEE-TT-EEEE-E.EEEEEEE-TTTSTTTTTSTTS--------HHHHHHHHHHHHHHHHHHHHHHHHHHS-STTTS CS
  E1-E2_ATPase  65 ................ekgdmvfsGtvvvsge.akavVtatgedtelgkiarlveeakskktplqkkldklgkvlvpvvlliallvflialllgk 142
                                   +  + + +G++  + + +++ ++ tg++t+++    ++ +   k+++++++l+  ++  +++ +l++++  ++ +++  
    EPX72943.1 421 snqntegtsaikqepfNMSNIALCGCTLRNSKwIIGLALYTGSETRIQMNRGVTPS---KRSRITRELNWTIALNFLLLFLMCIISGILRMVYSA 512
                   88888888888888887888888888877754267788888888888655544444...466666666666666555555555555555544433 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 2
                    T..........HHHHHHHHHHHHHS- CS
  E1-E2_ATPase  145 a..........eallralallvaaiP 160 
                               +++++ l+++v+  P
    EPX72943.1 1272 KstfrvgktftFWVVNLLTIVVSLFP 1297
                    03333444444777777777777766 PP

>> Hydrolase_3  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0         4   8.9e+03      21      47 ..     886     912 ..     879     949 .. 0.62
   2 !   17.7   0.1     1e-06    0.0023     205     228 ..    1029    1052 ..    1013    1061 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 4
                  HHHHHHHHHTTSEEEEE-SS-HHHHHH CS
  Hydrolase_3  21 keaikklkekgikvviATGRslravlp 47 
                   e+i  l+++gik+ + TG +++++ +
   EPX72943.1 886 PETIDLLSKAGIKLWVLTGDKVETATN 912
                  445555555566665555555444444 PP

  == domain 2  score: 17.7 bits;  conditional E-value: 1e-06
                   GEEEEESSGGGHHHHHHSSEEEEE CS
  Hydrolase_3  205 eviafGDgeNDieMLeaaglgvAm 228 
                    ++a+GDg ND++M+++a++gv +
   EPX72943.1 1029 TTLAIGDGANDVSMIQQADIGVGI 1052
                   589****************99965 PP

>> DUF2304  Uncharacterized conserved protein (DUF2304)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.1      0.46     1e+03      52      82 ..     479     509 ..     472     525 .. 0.67
   2 ?   -1.7   0.3       1.6   3.5e+03      11      41 ..    1224    1254 ..    1218    1264 .. 0.79
   3 ?   11.4   0.4   0.00013      0.29      20      67 ..    1269    1316 ..    1260    1318 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.46
     DUF2304  52 tvlanllGvgrgtnllfllgivfllvilfsl 82 
                 +++++ l    ++n+l+l++++++  il   
  EPX72943.1 479 SRITRELNWTIALNFLLLFLMCIISGILRMV 509
                 5566666666777888888777776665444 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.6
     DUF2304   11 vllllliirlvrkkklkleysllwlllalil 41  
                  v++++ ++ l++++ l+l    +wl+  +i 
  EPX72943.1 1224 VIFVINTFILINQESLDLISVGTWLFSLIIF 1254
                  7888999999999999999999998877665 PP

  == domain 3  score: 11.4 bits;  conditional E-value: 0.00013
     DUF2304   20 lvrkkklkleysllwlllalilivlslfpqiltvlanllGvgrgtnll 67  
                   ++k+ +++ +++++ ++ l+ iv+slfp++ t+la+ l   r ++ll
  EPX72943.1 1269 AFHKSTFRVGKTFTFWVVNLLTIVVSLFPRLSTILAQKLFYPREIDLL 1316
                  5789999999***************************99888888876 PP

>> Tail_VII  Inovirus G7P protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.4   0.00018      0.41       3      26 ..    1178    1201 ..    1177    1203 .. 0.86
   2 ?   -1.0   0.7      0.73   1.6e+03       6      25 ..    1240    1259 ..    1235    1261 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00018
    Tail_VII    3 sveDavawsticiglVlvWFvLGr 26  
                  sv D v++s++c g+ l  F  Gr
  EPX72943.1 1178 SVLDGVYQSMVCFGVALFVFYAGR 1201
                  5779***********998888777 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.73
    Tail_VII    6 DavawsticiglVlvWFvLG 25  
                  D +   t   +l++ WF  G
  EPX72943.1 1240 DLISVGTWLFSLIIFWFWTG 1259
                  7777777888*******766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1382 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       656  (0.0365888); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.82u 0.33s 00:00:01.14 Elapsed: 00:00:00.48
# Mc/sec: 8637.35
//
Query:       EPX72944.1  [L=126]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     0.0023   18.3   5.8     0.0034   17.7   5.8    1.3  1  Syntaxin_2      Syntaxin-like protein
     0.0047   17.4  11.2        1.5    9.4  11.2    2.3  1  YtxH            YtxH-like protein
  ------ inclusion threshold ------
      0.016   15.0   2.5      0.019   14.8   2.5    1.1  1  DUF445          Protein of unknown function (DUF445)
      0.029   14.2   7.0      0.054   13.4   7.0    1.4  1  Apolipoprotein  Apolipoprotein A1/A4/E domain
      0.038   13.6   5.9      0.066   12.8   5.8    1.5  1  Relaxase        Relaxase/Mobilisation nuclease domain
        0.1   12.5   0.9       0.29   11.1   0.2    1.9  2  Nre_C           Archaeal Nre, C-terminal
       0.38   11.7   7.1       0.61   11.0   7.1    1.3  1  CSN5_C          Cop9 signalosome subunit 5 C-terminal domain
        0.4   10.6   4.8       0.52   10.2   0.9    1.9  2  CemA            CemA family
        0.6   10.5   4.8         12    6.3   4.8    2.4  1  Dynein_light    Dynein light chain type 1
       0.82   10.3   5.2         12    6.6   5.0    2.2  1  DUF883          Bacterial protein of unknown function (DUF883
        1.2    9.4   6.2       0.76   10.1   2.9    1.8  2  PSII_Pbs27      Photosystem II Pbs27
        1.4    7.8   2.5        1.6    7.6   2.5    1.0  1  LMBR1           LMBR1-like membrane protein
        3.6    7.7   6.3          6    7.0   1.3    2.1  2  TetR_C_23       Tetracyclin repressor-like, C-terminal domain
        6.3    5.9   6.7        7.5    5.7   6.7    1.1  1  TMPIT           TMPIT-like protein


Domain annotation for each model (and alignments):
>> Syntaxin_2  Syntaxin-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   5.8   2.7e-06    0.0034       9      81 ..      31     100 ..      19     105 .. 0.86

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 2.7e-06
  Syntaxin_2   9 nsnvstleklvkqLgtkkd..teelrekl.helieeinelikktnellkklsqldnsssdsqqklqkekLkkdfke 81 
                  ++ ++lekl k Lg+k++  ++e++ek  ++l +e+ e +k+t + +k+ +  ++++       + +kLk++f e
  EPX72944.1  31 EQSPQKLEKLKKALGKKGEeiSQEVNEKPaEQLKNETAESVKRTAQGVKDTNYEEKTK------SATQKLKEEFDE 100
                 566689***********98899999999669*******************99855555......589999999987 PP

>> YtxH  YtxH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4  11.2    0.0012       1.5      21      70 ..      46     105 ..      16     110 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0012
        YtxH  21 ksGketRkdlkek.addlkekakelleeakeka.........kekaedlkekvkekadel 70 
                 k+G+e  ++++ek a++lk+ + e ++++++ +         k+ +++lke+++e+++++
  EPX72944.1  46 KKGEEISQEVNEKpAEQLKNETAESVKRTAQGVkdtnyeektKSATQKLKEEFDERSSDV 105
                 789999999999986666666644444444444666695555555666666666555554 PP

>> DUF445  Protein of unknown function (DUF445)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   2.5   1.4e-05     0.019     158     246 ..      17     101 ..       8     125 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.4e-05
      DUF445 158 evkekikelidelieeesgklvlesivsmflreltsilekvksdpdhllreeedkkvreliadllndpelaakveklkkkklsdlevqe 246
                   +++i++ i+e++e+  +k  le++ + + ++ ++i ++v+++p+++l++e  + v++ ++ +++  ++++k +   +k+ ++ ++ +
  EPX72944.1  17 PRNTTIRQYIKETLEQSPQK--LEKLKKALGKKGEEISQEVNEKPAEQLKNETAESVKRTAQGVKD-TNYEEKTKSATQKLKEEFDE-R 101
                 56678999999999999777..9***********************************99999999.56666666655555554443.3 PP

>> Apolipoprotein  Apolipoprotein A1/A4/E domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   7.0   4.2e-05     0.054      74     152 ..      21     102 ..       9     117 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 4.2e-05
                     HCCHHHHHHHHHHHHCHHCCHHCHCCHCHHHHHHHHHH.HHHHHHHHCHHHHHHHHHHHH.HHHHHHH-----...-----S CS
  Apolipoprotein  74 rlapyteelrerlaadaeelqeqlavyaeelrerlerh.vealkarlapyveelrqklae.rleelkeslaphae.eveerl 152
                     ++  y++e  e+  +++e+l+++l +++ee+ +++ ++ +e+lk   a+ v ++ q+++  + ee  +s++++++ e+ er 
      EPX72944.1  21 TIRQYIKETLEQSPQKLEKLKKALGKKGEEISQEVNEKpAEQLKNETAESVKRTAQGVKDtNYEEKTKSATQKLKeEFDERS 102
                     4677888888888889999999999999999888888888888888888888888755431333333333333221333333 PP

>> Relaxase  Relaxase/Mobilisation nuclease domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   5.8   5.1e-05     0.066     172     227 ..      21      77 ..      13     101 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 5.1e-05
    Relaxase 172 eirqalkkale.nasdfedlkealkekglelrrktgkkltykltdenqkkvrgsklg 227
                  irq +k++le + +  e+lk+al++kg e++++ ++k  ++l++e  ++v+ ++ g
  EPX72944.1  21 TIRQYIKETLEqSPQKLEKLKKALGKKGEEISQEVNEKPAEQLKNETAESVKRTAQG 77 
                 68999****9988899****************8888888888888877666655443 PP

>> Nre_C  Archaeal Nre, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.2   0.00022      0.29      54      90 ..      21      57 ..      19      76 .. 0.81
   2 ?    0.3   0.1      0.52   6.6e+02      72      86 ..      82      96 ..      60     117 .. 0.49

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00022
       Nre_C 54 qvReavrkalekkpkefesleealeevseklklplkk 90
                 +R+ ++++le++p++ e+l++al +  e+++ ++++
  EPX72944.1 21 TIRQYIKETLEQSPQKLEKLKKALGKKGEEISQEVNE 57
                59**********************9988888876654 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.52
       Nre_C 72 sleealeevseklkl 86
                + ee ++++++klk 
  EPX72944.1 82 NYEEKTKSATQKLKE 96
                233333333333333 PP

>> CSN5_C  Cop9 signalosome subunit 5 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   7.1   0.00047      0.61       8      86 ..      22      97 ..      19      98 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00047
      CSN5_C  8 NrdYatkqisDLaeKlekaessvsrsrsaagtlseeaseaeekkkkkkedsqLakvvkdstkiaseaqhGLiaqelKdk 86
                 r+Y+ + ++   +Klek ++++ ++++++++  +e   + +++ k+++ +++++ ++  +  + e+++   +q+lK++
  EPX72944.1 22 IRQYIKETLEQSPQKLEKLKKALGKKGEEISQEVNE---KPAEQLKNETAESVKRTAQGVKDTNYEEKTKSATQKLKEE 97
                599***********************9999777754...5666778999999999999999999*****9999999985 PP

>> CemA  CemA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.9   0.00041      0.52      68     116 ..      25      72 ..      14      77 .. 0.80
   2 ?    2.9   0.3     0.068        87      76     107 ..      75     106 ..      68     114 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00041
        CemA  68 eleeligeapelseeeieeelkekaeelakeyreesseaiknifadlvs 116
                  ++e+++++p  + e++++ l +k ee+++e++e+ +e +kn  a+ v 
  EPX72944.1  25 YIKETLEQSP-QKLEKLKKALGKKGEEISQEVNEKPAEQLKNETAESVK 72 
                 3555666665.46889999***********************9998775 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.068
        CemA  76 apelseeeieeelkekaeelakeyreesseai 107
                 a+ +++++ ee+ k+ +++l++e++e+ss+ +
  EPX72944.1  75 AQGVKDTNYEEKTKSATQKLKEEFDERSSDVL 106
                 445789999*****************999876 PP

>> Dynein_light  Dynein light chain type 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   4.8    0.0091        12      10      47 ..      64     101 ..       4     105 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0091
                   -HHHHHHHHHHHHHHHHH-SSHH..HHHHHHHHHHHHH CS
  Dynein_light  10 seemqeeaielakealekfkkekekdiaayikkeldkk 47 
                   ++e  e + ++a+   +++ +ek k + +++k+e+d++
    EPX72944.1  64 KNETAESVKRTAQGVKDTNYEEKTKSATQKLKEEFDER 101
                   4455555666666555565556669***********98 PP

>> DUF883  Bacterial protein of unknown function (DUF883)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   5.0    0.0092        12       4      55 ..      27      79 ..      19     121 .. 0.63

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0092
      DUF883  4 eaeleslladleellkeaadeageeaeelRerleerlerare.rlrdaeeava 55
                ++ le+  ++le+l k+ +++++e  +e+ e+  e+l++  + +++++++ v+
  EPX72944.1 27 KETLEQSPQKLEKLKKALGKKGEEISQEVNEKPAEQLKNETAeSVKRTAQGVK 79
                34456666677777777777777777777776666665433303333333322 PP

>> PSII_Pbs27  Photosystem II Pbs27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.1      0.65   8.4e+02      52      80 ..      23      48 ..      17      57 .. 0.55
   2 ?   10.1   2.9    0.0006      0.76      20      82 ..      59     121 ..      51     125 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.65
  PSII_Pbs27 52 vktlresleldkkddakreraakaakesi 80
                ++ ++e+le    + +k+e+  ka+ +++
  EPX72944.1 23 RQYIKETLEQ---SPQKLEKLKKALGKKG 48
                3344444444...4455666555555544 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.0006
  PSII_Pbs27  20 avgaiaslfdpnektkadkalpkaYlkdarevvktlresleldkkddakreraakaakesire 82 
                 +++++++  ++  k +a+++ +++Y+++++   ++l+e   +  +d+    r+  ++ke++++
  EPX72944.1  59 PAEQLKNETAESVKRTAQGVKDTNYEEKTKSATQKLKEEFDERSSDVLGDARRDGTLKEKGKK 121
                 56677777778888889999***********************99999999999999999875 PP

>> LMBR1  LMBR1-like membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   2.5    0.0012       1.6     241     323 ..      20      99 ..      10     117 .. 0.59

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0012
       LMBR1 241 dplrkyleeilkkvPeeiaeklks........nenkteeslaklekqlikalqkrertek..qwkrllekalelediiknksskekefksses 323
                  ++r+y++e l+++P+++++  k+        +++ +e++  +l++++ ++++++++  k  ++++  +              + +++k++++
  EPX72944.1  20 TTIRQYIKETLEQSPQKLEKLKKAlgkkgeeiSQEVNEKPAEQLKNETAESVKRTAQGVKdtNYEEKTKS-------------ATQKLKEEFD 99 
                 3388999999999999988887778887776655556666666665555555555443330023333333.............3444444443 PP

>> TetR_C_23  Tetracyclin repressor-like, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   1.3    0.0047         6      31      73 ..      31      73 ..      16      78 .. 0.79
   2 ?    3.8   0.3     0.046        59      24      64 ..      78     118 ..      74     124 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0047
   TetR_C_23 31 lsnlsklselrkkfkefakelleegletkelkvrkflekklse 73
                +++++kl++l+k+  +  +e+ +e++e+  ++ +++++++++ 
  EPX72944.1 31 EQSPQKLEKLKKALGKKGEEISQEVNEKPAEQLKNETAESVKR 73
                4678899999999999999999999999999888888777765 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.046
   TetR_C_23  24 lkkaksplsnlsklselrkkfkefakelleegletkelkvr 64 
                 +k+ + ++++ s  ++l+++f e ++++l ++ ++++lk++
  EPX72944.1  78 VKDTNYEEKTKSATQKLKEEFDERSSDVLGDARRDGTLKEK 118
                 67788889999999************999999988888765 PP

>> TMPIT  TMPIT-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   6.7    0.0059       7.5       5      80 ..      28     103 ..      21     120 .. 0.65

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0059
       TMPIT   5 eelekefkeleetakeykqkleelsklqskcskeikkqkkrlkelksslkklkks.vkeeeeeeveelkeelkerkk 80 
                 e+le++ ++le+ +k + +k ee+s+  ++    ++ +++ ++++k++ + +k +  +e++++++++lkee++er++
  EPX72944.1  28 ETLEQSPQKLEKLKKALGKKGEEISQEVNEKPA-EQLKNETAESVKRTAQGVKDTnYEEKTKSATQKLKEEFDERSS 103
                 456777777777777777777777666554332.2333344455555555555442337888899999999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2951  (0.164594); expected 358.6 (0.02)
Passed bias filter:                     1006  (0.0561102); expected 358.6 (0.02)
Passed Vit filter:                       124  (0.00691617); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.53u 0.31s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 852.96
//
Query:       EPX72945.1  [L=405]
Description: NUP37 family WD repeat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-05   26.0   4.8      0.021   15.7   0.2    5.4  6  WD40      WD domain, G-beta repeat
  ------ inclusion threshold ------
       0.11   12.7   1.2       0.24   11.6   1.2    1.5  1  E7        E7 protein, Early protein


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1      0.23     2e+03      18      37 ..      25      43 ..      16      44 .. 0.76
   2 ?    0.6   0.0      0.13   1.2e+03      25      36 ..     112     123 ..      57     124 .. 0.65
   3 !   15.7   0.2   2.4e-06     0.021       8      37 ..     141     179 ..     132     180 .. 0.82
   4 ?    3.4   0.0     0.018   1.6e+02      13      38 .]     198     223 ..     187     223 .. 0.81
   5 ?   -2.9   0.0       1.8   1.6e+04      12      24 ..     283     293 ..     271     294 .. 0.56
   6 ?    2.1   0.0     0.047   4.2e+02      13      26 ..     378     391 ..     364     400 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.23
                EETTSSEEEEEETTSEEEEE CS
        WD40 18 fspdgawlasGsdDgtvriW 37
                 s+ +++la G+ D  + i+
  EPX72945.1 25 SSSCSNLLAIGH-DTGITIY 43
                577788899999.8777665 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.13
                 EEEEETTSEEEE CS
        WD40  25 lasGsdDgtvri 36 
                 +a+ + D+tvr+
  EPX72945.1 112 FACVCQDNTVRL 123
                 344478999996 PP

  == domain 3  score: 15.7 bits;  conditional E-value: 2.4e-06
                 ESS.SSEEEEE....EETTSSE....EEEEETTSEEEEE CS
        WD40   8 tGH.ssvtsla....fspdgaw....lasGsdDgtvriW 37 
                 +GH s+v++++    +s d+++    +as +dD+t+ iW
  EPX72945.1 141 SGHhSFVNAISivdvYSADNKLaeqvIASVGDDNTLIIW 179
                 599899****999*********9996676699******* PP

  == domain 4  score: 3.4 bits;  conditional E-value: 0.018
                 EEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40  13 vtslafspdgaw.lasGsdDgtvriWd 38 
                 v s+ f+p+++  l+ G + g++r++d
  EPX72945.1 198 V-SVEFHPSNPNhLLVGEKSGNIRVFD 223
                 5.78899999995458*99******98 PP

  == domain 5  score: -2.9 bits;  conditional E-value: 1.8
                 SEEEEEEETTSSE CS
        WD40  12 svtslafspdgaw 24 
                 s+ ++  +++gaw
  EPX72945.1 283 SILAV--CRSGAW 293
                 35555..666666 PP

  == domain 6  score: 2.1 bits;  conditional E-value: 0.047
                 EEEEEEETTSSEEE CS
        WD40  13 vtslafspdgawla 26 
                 + ++a++++g+++a
  EPX72945.1 378 IVDMAWHKSGNYVA 391
                 67999*******87 PP

>> E7  E7 protein, Early protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   1.2   2.7e-05      0.24      24      76 ..      87     133 ..      69     137 .. 0.62

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2.7e-05
                 ----XXXXXXXXXXXXXXXXXXXXEE.EEEEEEXTTTX.XEEEEEEEEXHHHHH CS
          E7  24 eelesedeeeeeedeptlkdktprrpgYavevaCprCe.qklrlvvlateegir 76 
                 e  +++d+e ee       +++++++ Y ++ aC  C+ +++rlvv  +++ i 
  EPX72945.1  87 EVKPHQDNEKEE------LSENTEKTEYTLCFACV-CQdNTVRLVVARNDSIIT 133
                 222333333222......345667777********.752689998877766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (405 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       599  (0.0334096); expected 358.6 (0.02)
Passed bias filter:                      502  (0.0279993); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 2796.04
//
Query:       EPX72946.1  [L=162]
Description: zf-HIT protein Hit1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-11   43.3  12.9      4e-11   42.6  12.9    1.4  1  zf-HIT    HIT zinc finger
  ------ inclusion threshold ------
      0.014   15.2   0.1      0.026   14.3   0.1    1.5  1  YL1_C     YL1 nuclear protein C-terminal domain
        0.5   10.5  16.0       0.96    9.6  16.0    1.5  1  zf-MYND   MYND finger


Domain annotation for each model (and alignments):
>> zf-HIT  HIT zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.6  12.9   6.6e-15     4e-11       3      30 .]       4      32 ..       2      32 .. 0.96

  Alignments for each domain:
  == domain 1  score: 42.6 bits;  conditional E-value: 6.6e-15
                -B-TTT-S.B-SEE-TTT--EESSHHHHH CS
      zf-HIT  3 klCgvCgf.pakYkCpkCntryCSLrCyk 30
                + C+vC + pakYkCpkC+++yCSL+Cyk
  EPX72946.1  4 QSCVVCVEgPAKYKCPKCSAHYCSLACYK 32
                67**************************8 PP

>> YL1_C  YL1 nuclear protein C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.1   4.3e-06     0.026       8      27 ..      13      32 ..      12      33 .. 0.96

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 4.3e-06
       YL1_C  8 pAkYrDPkTgLpYanveayk 27
                pAkY++Pk    Y+++  yk
  EPX72946.1 13 PAKYKCPKCSAHYCSLACYK 32
                9******************9 PP

>> zf-MYND  MYND finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6  16.0   0.00016      0.96       1      32 [.       6      36 ..       6      40 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00016
                -TTT--.B-SCE-TTTS-SEESSHHHHHHCHH CS
     zf-MYND  1 CavCgkaealkkCagCksvfYCskeCqradwk 32
                C vC + +a+ kC++C s+ YCs +C +++ +
  EPX72946.1  6 CVVCVEGPAKYKCPKC-SAHYCSLACYKQHQQ 36
                999***55555*****.999******999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1091  (0.0608511); expected 358.6 (0.02)
Passed bias filter:                      544  (0.0303419); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.27s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 1129.46
//
Query:       EPX72947.1  [L=100]
Description: glutaredoxin Grx1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.8e-16   59.5   0.3    3.5e-16   59.2   0.3    1.1  1  Glutaredoxin   Glutaredoxin
    0.00049   20.5   0.3      0.001   19.5   0.3    1.6  1  Thioredoxin_2  Thioredoxin-like domain
    0.00063   19.9   0.9       0.25   11.5   0.5    2.0  2  Thioredoxin_4  Thioredoxin
     0.0022   18.0   0.1      0.003   17.6   0.1    1.2  1  Thioredoxin_3  Thioredoxin domain
  ------ inclusion threshold ------
      0.016   15.4   0.1      0.026   14.7   0.1    1.4  1  Thioredoxin_7  Thioredoxin-like
      0.028   14.8   0.0      0.033   14.6   0.0    1.2  1  DUF836         Glutaredoxin-like domain (DUF836)
       0.03   13.7   0.0      0.038   13.3   0.0    1.1  1  DUF3083        Protein of unknown function (DUF3083)
      0.057   13.7   0.0      0.073   13.4   0.0    1.2  1  GST_N_2        Glutathione S-transferase, N-terminal domain
        0.1   12.4   0.0       0.13   12.1   0.0    1.2  1  Thioredoxin_9  Thioredoxin
       0.11   12.2   0.0        1.3    8.7   0.0    2.0  2  DSBA           DSBA-like thioredoxin domain


Domain annotation for each model (and alignments):
>> Glutaredoxin  Glutaredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.2   0.3     2e-19   3.5e-16       1      60 []      16      78 ..      16      78 .. 0.98

  Alignments for each domain:
  == domain 1  score: 59.2 bits;  conditional E-value: 2e-19
                  EEEEESTSSHHHHHHHHHHHHTTGGEEEEEGCCSH...HHHHHHHHHHTSSSSSEEEETTEEE CS
  Glutaredoxin  1 vvlftkptCpyCkkakrlLkelgvkfeeidvdkde...eireelkelsgvrtvPqvfidgkhv 60
                  vv+f k++CpyC+++ ++  + ++k ++i++d  +   ei+++l +++g+rtvP vfi +khv
    EPX72947.1 16 VVVFAKTYCPYCHATEKVIADEKIKAKIIQLDTLDngdEIQAYLLKKTGQRTVPSVFIHQKHV 78
                  8********************************98899************************8 PP

>> Thioredoxin_2  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.3   5.7e-07     0.001       9      45 ..      16      52 ..      13      89 .. 0.69

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 5.7e-07
  Thioredoxin_2  9 lvvftdpdCpyCkklkkelkelddvtvrvllfp.lkps 45
                   +vvf+++ CpyC++ +k++ +  +++ +++  + l++ 
     EPX72947.1 16 VVVFAKTYCPYCHATEKVIADE-KIKAKIIQLDtLDNG 52
                   79***************99988.555554444444443 PP

>> Thioredoxin_4  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   0.5   0.00014      0.25      13      44 ..      12      45 ..       9      50 .. 0.86
   2 !    7.3   0.0    0.0027       4.8     133     160 ..      60      87 ..      46      90 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00014
                   -SEEEEEEE-TT-HHHHHHHHHHH..HHHHHHHH CS
  Thioredoxin_4 13 ApvtvieyedlrCphCakfeeeve..klleeyid 44
                   A + v++++   Cp+C + e+ +   k++++ i+
     EPX72947.1 12 ANNDVVVFAKTYCPYCHATEKVIAdeKIKAKIIQ 45
                   67789****************9977789999887 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0027
                    HHHHT--SS-EEEETTEEE-TT--HHHH CS
  Thioredoxin_4 133 akkagiestPtfiingekveepqtyeel 160
                    +kk+g  ++P+++i ++ v +++++++l
     EPX72947.1  60 LKKTGQRTVPSVFIHQKHVGGNSDFQTL 87 
                    3899999*************99999877 PP

>> Thioredoxin_3  Thioredoxin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.1   1.7e-06     0.003       4      58 ..      17      76 ..      14      86 .. 0.76

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 1.7e-06
                   EEE.SSSSTTCHHHHHHHHHHCHCCT.CEC.EEECCTTHHHH..HHCT-SSSSEEECTTC CS
  Thioredoxin_3  4 kvl.gpgCakCpklekavkeaaaekg.ika.evekvtdfeei..ekygVmsvPalvidgk 58
                    v+ ++ C++C+++ek+++ +  + + i++ ++++  +++    +k g ++vP+++i  k
     EPX72947.1 17 VVFaKTYCPYCHATEKVIADEKIKAKiIQLdTLDNGDEIQAYllKKTGQRTVPSVFIHQK 76
                   5642566*****999998766555544888555555999998999***********9655 PP

>> Thioredoxin_7  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.1   1.5e-05     0.026      22      55 ..      17      45 ..      14      76 .. 0.62

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.5e-05
                   EEE--TT-HHHHHHHHHHHH-HHHHH.HHHT-EE CS
  Thioredoxin_7 22 vffgaswcftCqalerdflsdeevkaalaekfvl 55
                   v+f +++c++C+a e++ ++++  +     k++ 
     EPX72947.1 17 VVFAKTYCPYCHATEKVIADEKIKA-----KIIQ 45
                   899************9988884333.....4443 PP

>> DUF836  Glutaredoxin-like domain (DUF836)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   1.9e-05     0.033       2      57 ..      16      75 ..      15      89 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1.9e-05
                EEEEE-TT-HHHHHHHHHHHHHCCCTTEEEEEEETTT-CC......CHCCCCTTTTEEEECT CS
      DUF836  2 ltLyskpgChlCeqakekLkelkleegleleviDIakdee......leakYgleipvlaleg 57
                ++ + k +C+ C+  ++++++ k++ +  + + D +++ +      l++  + ++p +++ +
  EPX72947.1 16 VVVFAKTYCPYCHATEKVIADEKIKAK--IIQLDTLDNGDeiqaylLKKTGQRTVPSVFIHQ 75
                789*****************7666666..666666633333466767777788888888766 PP

>> DUF3083  Protein of unknown function (DUF3083)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   2.1e-05     0.038      49      86 ..      17      57 ..       2      62 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 2.1e-05
     DUF3083 49 lff...YnPeyheakklffeeavrarkirllfLatGdelra 86
                ++f   Y+P  h ++k  ++e+++a+ i+l  L +Gde++a
  EPX72947.1 17 VVFaktYCPYCHATEKVIADEKIKAKIIQLDTLDNGDEIQA 57
                333345********************************986 PP

>> GST_N_2  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   4.1e-05     0.073       1      54 [.      23      76 ..      23      86 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 4.1e-05
                S-HHHHHHHHHHHHCT--EEEEEEH...-TTSHHHHHHHHCTTTSSSEEE-CTT CS
     GST_N_2  1 aCPwahRvlialalkglediisvvvlepkgfekseefprlnprgtVPvLwdkdg 54
                +CP++h +  ++a  ++  +i+ ++  ++g+e  + +++ +++ tVP  ++++ 
  EPX72947.1 23 YCPYCHATEKVIADEKIKAKIIQLDTLDNGDEIQAYLLKKTGQRTVPSVFIHQK 76
                5**********************977778888888899*********9999754 PP

>> Thioredoxin_9  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   7.1e-05      0.13      42     107 ..      13      77 ..       2      89 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 7.1e-05
                    -EEEEEE--TT-HHHHHHHHHHHHHHHH-TTEEEEEE-HHHHHHHTTTTTT..-SS--SSEEEEE-TT CS
  Thioredoxin_9  42 klkilvltedwCgDaavnvPvlakiaelnpnievkillrdenlelmdqylt..ngaraiPtliildee 107
                    + +++v+++ +C+ + ++  v+a  +  ++ i+++ l   +n + ++ yl    g+r++P ++i ++ 
     EPX72947.1  13 NNDVVVFAKTYCPYCHATEKVIADEKIKAKIIQLDTL---DNGDEIQAYLLkkTGQRTVPSVFIHQKH 77 
                    55899***********998777655555544555555...344555555544789*******998765 PP

>> DSBA  DSBA-like thioredoxin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.0   0.00074       1.3       2      20 ..      16      34 ..      15      50 .. 0.86
   2 ?    1.9   0.0     0.095   1.7e+02     168     189 ..      68      88 ..      51      90 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00074
                EEEEEBTTBHHHHHHHHHH CS
        DSBA  2 vdeffDvlCPyCylgkerl 20
                v++f   +CPyC++ ++++
  EPX72947.1 16 VVVFAKTYCPYCHATEKVI 34
                88999********999887 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.095
                 SSEEEETTCEEEESSSSHHHHH CS
        DSBA 168 vPtvvvdgkrmvfGadrldtla 189
                 vP v++  k  v G+++++tl 
  EPX72947.1  68 VPSVFIHQK-HVGGNSDFQTLY 88 
                 9*****999.899**9999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       747  (0.0416643); expected 358.6 (0.02)
Passed bias filter:                      590  (0.0329076); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 705.91
//
Query:       EPX72948.1  [L=814]
Description: TTC27 family TPR repeat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.7e-11   42.0   0.0    0.00018   21.5   0.0    4.6  3  TPR_8     Tetratricopeptide repeat
    9.1e-10   38.5   0.2        1.4   10.0   0.0    6.1  6  TPR_14    Tetratricopeptide repeat
      1e-09   37.8   0.1    0.00054   19.7   0.0    3.6  3  TPR_1     Tetratricopeptide repeat
    3.4e-07   30.2   0.3     0.0043   17.3   0.0    3.9  3  TPR_17    Tetratricopeptide repeat
    4.5e-07   29.5   0.4     0.0019   18.2   0.0    3.8  2  TPR_2     Tetratricopeptide repeat
    4.2e-05   24.0   0.0      0.015   15.8   0.0    4.4  5  TPR_19    Tetratricopeptide repeat
    0.00022   21.3   0.1      0.098   12.8   0.0    3.5  4  TPR_9     Tetratricopeptide repeat
    0.00034   21.2   0.1       0.62   10.8   0.0    3.7  3  TPR_16    Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.012   15.3   0.0        1.5    8.6   0.0    3.0  3  TPR_11    TPR repeat
      0.025   14.3   0.0        6.1    6.5   0.0    2.9  2  RPN7      26S proteasome subunit RPN7
      0.032   14.9   0.5         54    4.7   0.0    4.5  3  TPR_6     Tetratricopeptide repeat
      0.065   13.5   3.5          8    6.8   0.0    4.5  5  TPR_12    Tetratricopeptide repeat
      0.089   12.0   4.0       0.98    8.6   0.6    3.2  2  TPR_15    Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.031        43      14      33 ..     469     488 ..     468     489 .. 0.92
   2 !    9.9   0.0   0.00066      0.91       7      32 ..     524     549 ..     519     549 .. 0.97
   3 !   21.5   0.0   1.3e-07   0.00018       2      34 .]     553     585 ..     552     585 .. 0.95

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.031
                 TT-HHHHHHHHHHHHHHHHH CS
       TPR_8  14 lgdyeeAkeyyekaleldpd 33 
                 l + + A++++e+ l++dp+
  EPX72948.1 469 LDRSDLAVQVIERQLSIDPK 488
                 7899***************8 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00066
                 HHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   7 lgsiylklgdyeeAkeyyekaleldp 32 
                 lg+ y+k+g++ +A+ ++ k l+++p
  EPX72948.1 524 LGRYYFKQGEMMKAMDAFYKSLRINP 549
                 89**********************98 PP

  == domain 3  score: 21.5 bits;  conditional E-value: 1.3e-07
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldpdn 34 
                 + ++  g++ l  ++y++A+e++ ++l+++p++
  EPX72948.1 553 PTWFTYGCAALGVKNYDAAMEAFTRCLSISPED 585
                 68*****************************85 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0      0.64   8.8e+02       3      27 ..     432     456 ..     430     467 .. 0.85
   2 !   10.0   0.0   0.00099       1.4      14      43 ..     469     498 ..     458     499 .. 0.91
   3 !    8.6   0.0    0.0026       3.6       3      41 ..     520     558 ..     518     559 .. 0.91
   4 !    9.6   0.0    0.0013       1.8      15      42 ..     566     593 ..     560     595 .. 0.87
   5 ?   -1.1   0.0       3.5   4.8e+03      16      29 ..     637     650 ..     632     657 .. 0.85
   6 ?   -1.6   0.0       5.1     7e+03       4      16 ..     753     765 ..     750     767 .. 0.82

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.64
      TPR_14   3 allalaeallalGdpdeAiallrra 27 
                 + ++lae +   G ++ A+++++r+
  EPX72948.1 432 LEAELAERFVSVGATKSALEIYERL 456
                 56789999999999*******9996 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00099
      TPR_14  14 lGdpdeAiallrralalaPddaeawlllaq 43 
                 l++ d A+++ +r l+ +P++  ++++l++
  EPX72948.1 469 LDRSDLAVQVIERQLSIDPKEHLLRTMLGD 498
                 567899**********************97 PP

  == domain 3  score: 8.6 bits;  conditional E-value: 0.0026
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddaeawlll 41 
                 a++ l+++++ +G+  +A++++ + l+ +P +  +w+ +
  EPX72948.1 520 AQRSLGRYYFKQGEMMKAMDAFYKSLRINPLSHPTWFTY 558
                 7889**************************999888765 PP

  == domain 4  score: 9.6 bits;  conditional E-value: 0.0013
      TPR_14  15 GdpdeAiallrralalaPddaeawllla 42 
                  ++d+A++++ r+l+  P+d e w  la
  EPX72948.1 566 KNYDAAMEAFTRCLSISPEDGESWNNLA 593
                 499*****************99998887 PP

  == domain 5  score: -1.1 bits;  conditional E-value: 3.5
      TPR_14  16 dpdeAiallrrala 29 
                 ++ e i++lrr+++
  EPX72948.1 637 QWTEVIRALRRIIE 650
                 78999******998 PP

  == domain 6  score: -1.6 bits;  conditional E-value: 5.1
      TPR_14   4 llalaeallalGd 16 
                  l+l+ea+++lG+
  EPX72948.1 753 ALELVEAYENLGE 765
                 5789999999996 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   3.9e-07   0.00054       4      32 ..     521     549 ..     518     549 .. 0.91
   2 !   13.9   0.0   2.7e-05     0.037       8      34 .]     559     585 ..     554     585 .. 0.89
   3 ?   -3.0   0.0       5.6   7.7e+03       2       9 ..     587     594 ..     587     595 .. 0.80

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 3.9e-07
                 HHHHHHHHHHTT-HHHHHHHHHHHHHHST CS
       TPR_1   4 lynlGnayfklgkydeAleyyekALelnP 32 
                    lG  yfk+g+  +A +++ k L++nP
  EPX72948.1 521 QRSLGRYYFKQGEMMKAMDAFYKSLRINP 549
                 567999**********************9 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 2.7e-05
                 HHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   8 GnayfklgkydeAleyyekALelnPnn 34 
                 G a +  ++yd A e++ ++L++ P++
  EPX72948.1 559 GCAALGVKNYDAAMEAFTRCLSISPED 585
                 66777789*****************86 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 5.6
                 HHHHHHHH CS
       TPR_1   2 kalynlGn 9  
                 ++++nl+ 
  EPX72948.1 587 ESWNNLAS 594
                 58****96 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       1.6   2.3e+03      13      32 ..     518     537 ..     516     539 .. 0.83
   2 !    7.8   0.0    0.0035       4.9       2      32 ..     541     571 ..     540     573 .. 0.88
   3 !   17.3   0.0   3.1e-06    0.0043       2      26 ..     575     599 ..     574     607 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 1.6
      TPR_17  13 adaynnLAelllknGdlmtA 32 
                 a+a   L++++ k+G+ m+A
  EPX72948.1 518 APAQRSLGRYYFKQGEMMKA 537
                 667778*********98887 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0035
      TPR_17   2 ylkaleldPnnadaynnLAelllknGdlmtA 32 
                 + k+l+++P + + ++ ++ + l  ++++ A
  EPX72948.1 541 FYKSLRINPLSHPTWFTYGCAALGVKNYDAA 571
                 679******************9988888877 PP

  == domain 3  score: 17.3 bits;  conditional E-value: 3.1e-06
      TPR_17   2 ylkaleldPnnadaynnLAelllkn 26 
                 ++++l + P + +++nnLA ++lk+
  EPX72948.1 575 FTRCLSISPEDGESWNNLASAMLKA 599
                 89******************99876 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.2   0.0    0.0044         6       3      32 ..     520     549 ..     518     551 .. 0.91
   2 !   18.2   0.0   1.4e-06    0.0019       3      34 .]     554     585 ..     552     585 .. 0.95

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0044
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldP 32 
                 a   lG+ y+k+g+  +A +af k+l+++P
  EPX72948.1 520 AQRSLGRYYFKQGEMMKAMDAFYKSLRINP 549
                 66789************************9 PP

  == domain 2  score: 18.2 bits;  conditional E-value: 1.4e-06
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldPnn 34 
                  ++  G+a++  ++y+ A eaf ++l++ P++
  EPX72948.1 554 TWFTYGCAALGVKNYDAAMEAFTRCLSISPED 585
                 59****************************86 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       9.1   1.3e+04      26      36 ..     305     315 ..     302     322 .. 0.78
   2 ?   -1.6   0.0         3   4.1e+03      31      55 ..     436     460 ..     425     463 .. 0.64
   3 ?    0.7   0.0      0.56   7.7e+02      32      60 ..     463     491 ..     440     499 .. 0.75
   4 ?    0.5   0.0      0.65   8.9e+02      14      48 ..     506     541 ..     504     556 .. 0.78
   5 !   15.8   0.0   1.1e-05     0.015       5      38 ..     566     599 ..     562     604 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 9.1
      TPR_19  26 earllLAeall 36 
                 +a llLA +++
  EPX72948.1 305 DASLLLAFCHI 315
                 89999**9998 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 3
      TPR_19  31 LAeallalgqldeAealLdalpeed 55 
                 LAe  ++ g ++ A ++ ++l+ +d
  EPX72948.1 436 LAERFVSVGATKSALEIYERLQMWD 460
                 5555556666666666666666655 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.56
      TPR_19  32 AeallalgqldeAealLdalpeedpddar 60 
                 + ++ +l + d A +++++ +  dp++  
  EPX72948.1 463 VVCQCSLDRSDLAVQVIERQLSIDPKEHL 491
                 56888899999999999998888888555 PP

  == domain 4  score: 0.5 bits;  conditional E-value: 0.65
      TPR_19  14 leqalqedpk.naearllLAeallalgqldeAealL 48 
                 +  a++ + + +a a+  L + ++++g+  +A+++ 
  EPX72948.1 506 YMDAWELSGErYAPAQRSLGRYYFKQGEMMKAMDAF 541
                 5567777777789999999*********99998765 PP

  == domain 5  score: 15.8 bits;  conditional E-value: 1.1e-05
      TPR_19   5 gdyaeAlalleqalqedpknaearllLAeallal 38 
                 ++y++A++++++ l+ +p+++e + +LA a+l++
  EPX72948.1 566 KNYDAAMEAFTRCLSISPEDGESWNNLASAMLKA 599
                 79*****************************997 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0         6   8.2e+03      11      24 ..     446     459 ..     426     460 .. 0.69
   2 ?    3.9   0.0     0.042        58       9      37 ..     470     498 ..     467     509 .. 0.86
   3 !   12.8   0.0   7.1e-05     0.098       5      63 ..     528     586 ..     524     594 .. 0.91
   4 ?   -2.2   0.0       3.5   4.8e+03       9      31 ..     636     658 ..     631     659 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 6
       TPR_9  11 weralavverllll 24 
                    al+++erl ++
  EPX72948.1 446 TKSALEIYERLQMW 459
                 45677777777655 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.042
       TPR_9   9 edweralavverllllaPddpeerrdRGl 37 
                 ++++ a +v+er l ++P+++ +r   G 
  EPX72948.1 470 DRSDLAVQVIERQLSIDPKEHLLRTMLGD 498
                 68899***************999876665 PP

  == domain 3  score: 12.8 bits;  conditional E-value: 7.1e-05
       TPR_9   5 aireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapdap 63 
                 +  + ++ +a+ +    l ++P ++  ++  G +   + ++ aA++++ ++l+++p++ 
  EPX72948.1 528 YFKQGEMMKAMDAFYKSLRINPLSHPTWFTYGCAALGVKNYDAAMEAFTRCLSISPEDG 586
                 56777888899999999***************************************986 PP

  == domain 4  score: -2.2 bits;  conditional E-value: 3.5
       TPR_9   9 edweralavverllllaPddpee 31 
                 ++w + ++++ r++ +++++++e
  EPX72948.1 636 NQWTEVIRALRRIIEIKSKAAGE 658
                 78999999*****9999998876 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0     0.016        23      32      65 ..     516     549 ..     511     552 .. 0.78
   2 !   10.8   0.0   0.00045      0.62       4      44 ..     559     596 ..     557     604 .. 0.91
   3 ?   -2.6   0.0       6.9   9.5e+03      22      41 ..     748     764 ..     744     765 .. 0.60

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.016
      TPR_16  32 daaeAllllgdaalrqgrlaeAaalyraalraap 65 
                 + a A+  lg+ +++qg++ +A +++ + lr  p
  EPX72948.1 516 RYAPAQRSLGRYYFKQGEMMKAMDAFYKSLRINP 549
                 5677999999999999999999966655556665 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00045
      TPR_16   4 araalragdyddAaaaleaalkrdpssPdaaeAllllgdaa 44 
                 + aal  ++yd+A +a+++ l      P++ e++++l+ a 
  EPX72948.1 559 GCAALGVKNYDAAMEAFTRCLSIS---PEDGESWNNLASAM 596
                 67999*******************...**********9885 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 6.9
      TPR_16  22 aalkrdpssPdaaeAllllg 41 
                 ++++++    + +eA+ +lg
  EPX72948.1 748 RTVADA---LELVEAYENLG 764
                 555555...66666666666 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.052        71       1      25 [.     525     549 ..     525     551 .. 0.94
   2 ?    8.6   0.0    0.0011       1.5       9      40 ..     567     598 ..     566     600 .. 0.94
   3 ?   -2.0   0.0       2.2     3e+03      28      35 ..     757     764 ..     755     765 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.052
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldP 25 
                 G+ y++qG+  +A+ a+ k l+++P
  EPX72948.1 525 GRYYFKQGEMMKAMDAFYKSLRINP 549
                 677********************99 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0011
      TPR_11   9 kyeeAieaYkkAlkldPdnaeayynLGlayyk 40 
                 +y++A+ea+ + l ++P++ e ++nL+ a++k
  EPX72948.1 567 NYDAAMEAFTRCLSISPEDGESWNNLASAMLK 598
                 7**************************99886 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 2.2
      TPR_11  28 aeayynLG 35 
                 +eay nLG
  EPX72948.1 757 VEAYENLG 764
                 799****9 PP

>> RPN7  26S proteasome subunit RPN7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0     0.021        29      37      62 ..     431     456 ..     407     471 .. 0.87
   2 ?    6.5   0.0    0.0044       6.1      17      61 ..     497     543 ..     489     553 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.021
                 HHHHHHHHHHHHCT-HHHHHHHHHTC CS
        RPN7  37 rakldlaehYlkigdleeAlkaysri 62 
                 ++  +lae+++++g +++Al+ y+r+
  EPX72948.1 431 QLEAELAERFVSVGATKSALEIYERL 456
                 67789*******************94 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0044
                 HHHHHHHHHHH..HTT-HHHHHHHHHHHHHHHHHCT-HHHHHHHHHT CS
        RPN7  17 eeLdaelkdak..enlgkeeirrakldlaehYlkigdleeAlkaysr 61 
                  ++++e k ++   +l  e  + a+  l+++Y+k g++ +A+ a+ +
  EPX72948.1 497 GDIQNEPKHYMdaWELSGERYAPAQRSLGRYYFKQGEMMKAMDAFYK 543
                 677888888876679999999*********************99866 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0       1.6   2.2e+03      14      26 ..     444     456 ..     419     457 .. 0.80
   2 ?    4.1   0.1     0.065        89       6      29 ..     524     547 ..     520     551 .. 0.82
   3 ?    4.7   0.0     0.039        54      14      32 ..     566     584 ..     556     585 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 1.6
                 HHHHHHHHHHHHH CS
       TPR_6  14 gdtdkAlealerl 26 
                 g t  Ale++erl
  EPX72948.1 444 GATKSALEIYERL 456
                 67889******98 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.065
                 HHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   6 lalsyrklgdtdkAlealerlike 29 
                 l++ y+k+g+  kA++a+ + ++ 
  EPX72948.1 524 LGRYYFKQGEMMKAMDAFYKSLRI 547
                 7999************99766555 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.039
                 HHHHHHHHHHHHHHHH-TT CS
       TPR_6  14 gdtdkAlealerlikeYPd 32 
                 +++d+A+ea+ r+++  P+
  EPX72948.1 566 KNYDAAMEAFTRCLSISPE 584
                 69***********998775 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.2       1.4     2e+03      48      71 ..     183     206 ..     165     206 .. 0.81
   2 ?   -3.1   0.0       7.4     1e+04      63      70 ..     448     455 ..     441     460 .. 0.63
   3 ?    6.8   0.0    0.0058         8      41      74 ..     516     547 ..     505     549 .. 0.79
   4 ?    3.3   0.0     0.075     1e+02      58      75 ..     565     582 ..     554     604 .. 0.52
   5 ?   -1.2   0.0       1.9   2.6e+03      15      56 ..     715     755 ..     705     764 .. 0.69

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 1.4
      TPR_12  48 lrnLgrlyralgryeeAlelleea 71 
                    Lg ++++ +r ++Al+ll+++
  EPX72948.1 183 AMELGLIQSYYDRDAAALQLLKDS 206
                 557999999999*******99975 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 7.4
      TPR_12  63 eAlellee 70 
                  Ale++e+
  EPX72948.1 448 SALEIYER 455
                 44444443 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.0058
      TPR_12  41 hpltattlrnLgrlyralgryeeAlelleealai 74 
                 +  +a ++r Lgr+y+++g+  +A +++ ++l+i
  EPX72948.1 516 R--YAPAQRSLGRYYFKQGEMMKAMDAFYKSLRI 547
                 4..7888999999999999999999999999987 PP

  == domain 4  score: 3.3 bits;  conditional E-value: 0.075
      TPR_12  58 lgryeeAlelleealaia 75 
                  ++y++A e+++++l i 
  EPX72948.1 565 VKNYDAAMEAFTRCLSIS 582
                 344444444444444432 PP

  == domain 5  score: -1.2 bits;  conditional E-value: 1.9
      TPR_12  15 rlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyr 56 
                 +  +y+e+l+   k+++i  ++++ +  ++at  r+ +++++
  EPX72948.1 715 WKRKYAESLDATIKSYRILISSPNITT-DEATWNRTVADALE 755
                 566788888888888888877777755.66666666666665 PP

>> TPR_15  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.1     0.061        84     146     242 ..     456     546 ..     410     559 .. 0.59
   2 ?    8.6   0.6   0.00071      0.98     151     208 ..     593     647 ..     585     660 .. 0.81

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.061
      TPR_15 146 aafllaraelyrqegqtdaAlrdyreAlalapdsselraallWlliDlgrraeLrellkawkaraesdasLwgplaaAlllLgrpkkALeylrkqak 242
                  +++ ++   +   +++d A++++++ l+ +p++  lr     +l D +++   ++++ aw+   e+ a+ +  l+  + + g+  kA++ ++k ++
  EPX72948.1 456 LQMWDRVVVCQCSLDRSDLAVQVIERQLSIDPKEHLLRT----MLGDIQNEP--KHYMDAWELSGERYAPAQRSLGRYYFKQGEMMKAMDAFYKSLR 546
                 345555555555566666666666666666666555554....445555333..4666666655566665555555555555555555555555555 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00071
      TPR_15 151 araelyrqegqtdaAlrdyreAlalapdsselraallWlliDlgrraeLrellkawka 208
                 a a l+ ++  +++A + ++++l++  ds  + ++++ +++D ++ +e   +++a+++
  EPX72948.1 593 ASAMLKADTHSKKEAWHTIQQGLKYMYDSWRVWENYMLISVDVNQWTE---VIRALRR 647
                 5567778888999******************************99998...4444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (814 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       641  (0.0357521); expected 358.6 (0.02)
Passed bias filter:                      522  (0.0291148); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.71u 0.32s 00:00:01.03 Elapsed: 00:00:00.49
# Mc/sec: 5029.79
//
Query:       EPX72949.1  [L=71]
Description: hypothetical protein SOCG_05731 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-19   70.3  12.9    1.3e-19   70.1  12.9    1.0  1  MTCP1     Mature-T-Cell Proliferation I type
  ------ inclusion threshold ------
       0.46   10.5  13.0       0.44   10.6  10.3    1.9  2  CX9C      CHCH-CHCH-like Cx9C, IMS import disulfide relay-sys
        1.8    8.8  10.7        3.9    7.7  10.7    1.6  1  CHCH      CHCH domain


Domain annotation for each model (and alignments):
>> MTCP1  Mature-T-Cell Proliferation I type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.1  12.9   2.3e-23   1.3e-19       2      61 ..       5      66 ..       4      67 .. 0.93

  Alignments for each domain:
  == domain 1  score: 70.1 bits;  conditional E-value: 2.3e-23
       MTCP1  2 ckkeAcaiqdCLqknnYneskCekvieaLyeCCkkfykeng..edaksvsCpkpsllrlklk 61
                c+keAc++q+C+q+n+Yn++kCe++i++L +CC+++y +ng  +++++ sCp+ s+l +++k
  EPX72949.1  5 CQKEACSLQSCIQRNQYNQNKCEAYIDSLLRCCNSWYLQNGseSKESPQSCPQYSILLRQMK 66
                ****************************************965667889******9999998 PP

>> CX9C  CHCH-CHCH-like Cx9C, IMS import disulfide relay-system,
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6  10.3   7.4e-05      0.44       6      41 ..       3      38 ..       1      40 [. 0.93
   2 ?    0.7   0.0     0.093   5.6e+02      23      32 ..      49      58 ..      45      64 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 7.4e-05
        CX9C  6 kyCpkefeaYhkCvssnqswpekCkeqkkeLakCik 41
                + C+ke  + ++C++ nq +++kC+ + ++L  C +
  EPX72949.1  3 ASCQKEACSLQSCIQRNQYNQNKCEAYIDSLLRCCN 38
                58*************************999999976 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.093
        CX9C 23 qswpekCkeq 32
                ++ p++C ++
  EPX72949.1 49 KESPQSCPQY 58
                6789999886 PP

>> CHCH  CHCH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7  10.7   0.00065       3.9       1      32 [.       5      36 ..       5      38 .. 0.96

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.00065
                THHHHHHHHHHHHHCTSSTTTTHHHHHHHHHH CS
        CHCH  1 CgeefkeylkClkdnsdefskCrkefeafkeC 32
                C++e   +++C++ n +++ kC  +++ +  C
  EPX72949.1  5 CQKEACSLQSCIQRNQYNQNKCEAYIDSLLRC 36
                9999999***********************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       767  (0.0427799); expected 358.6 (0.02)
Passed bias filter:                      293  (0.0163422); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.35u 0.27s 00:00:00.62 Elapsed: 00:00:00.41
# Mc/sec: 524.45
//
Query:       EPX72950.1  [L=537]
Description: cell wall protein Gas1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   1.7e-129  431.7   7.1   2.3e-129  431.2   7.1    1.1  1  Glyco_hydro_72  Glucanosyltransferase
    6.7e-22   78.0   6.9    2.2e-21   76.3   6.9    2.0  1  X8              X8 domain
     0.0002   20.9   0.3    0.00075   19.0   0.3    1.8  1  Cellulase       Cellulase (glycosyl hydrolase family 5)
  ------ inclusion threshold ------
      0.056   13.0   0.1       0.11   12.0   0.1    1.5  1  Hyr1            Hyphally regulated cell wall GPI-anchored pro


Domain annotation for each model (and alignments):
>> Glyco_hydro_72  Glucanosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  431.2   7.1  5.1e-133  2.3e-129       5     314 ..      20     324 ..      17     325 .. 0.98

  Alignments for each domain:
  == domain 1  score: 431.2 bits;  conditional E-value: 5.1e-133
                     SSTTS--EEEETTEEEETTT-BBE-EEEEE--BE------SSB-GGG-HHHHHHHHHHHHHHT-SEEEES---TTS--HHHHHHHHHTT-EEEEE CS
  Glyco_hydro_72   5 aeeaveaieikgnkffdsksgeqfyikGvdyqpggseevsslvdpladaeaCkrdikllkelgvntvrvyavdnskdhdeCmkalsdagiyvild 99 
                     ++++v+++++ g+ f+ +k+g++f+ikG++yqp+++   +++vdplad+++C+rd+k+lkel vnt+rvy+v++s +hd+Cmk+++d+giyv+ d
      EPX72950.1  20 VQASVPPVHVDGRYFW-NKNGTRFFIKGIAYQPDSN-GDEKYVDPLADKSTCERDVKYLKELSVNTIRVYSVNSSSNHDDCMKIFDDNGIYVLSD 112
                     57899******99998.899**************98.5789****************************************************** PP

                     S-BTTBS--TTS-..---HHHHHHHHHHHHHHTT-TTEEEEEEEESSS-STT-GGGHHHHHHHHHHHHHHHHHSSS----EEEEE---TTTHHHH CS
  Glyco_hydro_72 100 lnepkesinradpassynedllervfkvidafkeyknvlgffaGnevvndksntaasayvkavvrdvkeyikkkkerkiPvGysaaddaelrvel 194
                     l++p+ sin +dp  s+ +dl+++++ v+d+++ y+nvlgf aGnevv + +nt+a+a+vka+vrdvk+yi ++ +r+iPvGys++d++e+rv +
      EPX72950.1 113 LSSPDVSINGKDP--SWSVDLFKHYTDVVDSLAPYNNVLGFIAGNEVVQNVNNTDAAAFVKAAVRDVKQYIVNSGHRQIPVGYSTNDEQETRVPM 205
                     *************..******************************************************************************** PP

                     HHHTTBTT-..--S-EEEEE----SS--HHHHSHHHHHHHHTT-SS-EEEEEE---SSSS---THHHHHTSHHHHTTEEEEEES-SB--SSS--S CS
  Glyco_hydro_72 195 aeylaCgdeddkadffglnmyeWCgkssfktsGydertkefenysiPlflseyGCnkvtprkftevealyseemtsvfsGGlvyeyseeannyGl 289
                     ++y++Cgd++d +df+g+n yeWCg ss+++sGydertkef+ny++P+f+se+GC +v+prkftev+al+s+emt+v+sGG++yey++ an+yG+
      EPX72950.1 206 SHYFDCGDKADIVDFYGINIYEWCGDSSIHSSGYDERTKEFQNYTVPVFFSEFGCIQVRPRKFTEVKALFSDEMTDVWSGGVAYEYFQAANKYGV 300
                     *********************************************************************************************** PP

                     EEE-TTS-EEE-THHHHHHHHHHH- CS
  Glyco_hydro_72 290 vkiddddvkkllkdfenlkseykki 314
                     v++++d+v+ +l+df +l+s y+++
      EPX72950.1 301 VSVSGDSVS-TLTDFPHLSSMYASV 324
                     *******99.9**********9987 PP

>> X8  X8 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.3   6.9   4.9e-25   2.2e-21       2      76 .]     373     444 ..     372     444 .. 0.96

  Alignments for each domain:
  == domain 1  score: 76.3 bits;  conditional E-value: 4.9e-25
                 EEEE-TTS-HHHHHHHHHHHTTTSSSSTT---SS......S-SS--TTHHHHHHHHHHHHHHTSSGGG--S-SSEE CS
          X8   2 wCvvkdsvdeeelgdlldyaCgeadCtaiqangt.tGkYGcyspcsvkqklsyalnsYYqkqgkkssaCdFsgsat 76 
                 +Cvv+d vd++++gdl++y+C+++dC+ai+angt  GkYG++s+c++kqkl+y+l++YYq++    + CdF+gsa+
  EPX72950.1 373 QCVVADGVDSSDYGDLFSYVCTKIDCDAISANGTaPGKYGSFSYCDSKQKLNYVLDAYYQQK----GGCDFKGSAS 444
                 7********************************967************************99....56*****995 PP

>> Cellulase  Cellulase (glycosyl hydrolase family 5)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.3   1.7e-07   0.00075      57     251 ..      88     265 ..      67     303 .. 0.74

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 1.7e-07
                 THHHHHHHHHHHHHHHHTT-EEEEEEESSTTTCSSSSTTTTHHH.HHHHHHHHHHHHHHHHTTTTTTEEEESSSS--STTCTCCTCHHHTTHHHHHHHH CS
   Cellulase  57 denslerveevvkyakenglyvildiHseegwltkadgnssedt.aeeffkklwtqiAerykkndevvifelmNEPhgnntgaewtseeadevkayaee 154
                   ns ++ ++ +k +++ng+yv+ d+ s+ ++    + n+++ + + + fk+  t + + ++ +++v++f   NE  +n ++    +++a+ vka++  
  EPX72950.1  88 SVNSSSNHDDCMKIFDDNGIYVLSDLSSP-DV----SINGKDPSwSVDLFKH-YTDVVDSLAPYNNVLGFIAGNEVVQNVNN----TDAAAFVKAAVRD 176
                 45777888999*****************6.33....5566665556777888.999**********************7765....5667888888888 PP

                 HHHHHHHHTTSSEEEEECHHHHTBHHHHHCTSG.....SSSSTTEEEEEEEETTTHHHTGCGSHSCTHHHHHHHHHHHHHHHHHHTTSEEEEEEEESST CS
   Cellulase 155 aikaIRavgpnrliivegnswsgnldgavlndP.....ndsqdnliysvHfYgpsdfaqtefgkdltdktnlaqrledaakylvekgipviigEfGgsn 248
                 + + I ++g  r i v+    s+n ++ +   P     +  ++  i+++  Yg   +      + ++d+++  + +++ +k + +  +pv+ +EfG  +
  EPX72950.1 177 VKQYIVNSGH-RQIPVGY---STNDEQ-ETRVPmshyfDCGDKADIVDF--YGINIY------EWCGDSSIHSSGYDERTKEFQNYTVPVFFSEFGCIQ 262
                 8888888876.7777765...666555.677886655533557777764..663332......357899999999999999999999999999999876 PP

                 TSS CS
   Cellulase 249 adg 251
                    
  EPX72950.1 263 VRP 265
                 554 PP

>> Hyr1  Hyphally regulated cell wall GPI-anchored protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   2.5e-05      0.11       1      25 [.     300     323 ..     300     324 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.5e-05
        Hyr1   1 ivsqsgsslTTlttFPppfqteYTs 25 
                 +vs sg+s++Tlt FP+   ++Y s
  EPX72950.1 300 VVSVSGDSVSTLTDFPHL-SSMYAS 323
                 799*************97.888865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (537 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       794  (0.0442858); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.26s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 3614.60
//
Query:       EPX72951.1  [L=1822]
Description: 1,3-beta-glucan synthase subunit Bgs3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
          0 1282.4   0.0          0 1281.9   0.0    1.2  1  Glucan_synthase  1,3-beta-glucan synthase component
    6.2e-39  133.3   4.0      2e-38  131.7   4.0    1.9  1  FKS1_dom1        1,3-beta-glucan synthase subunit FKS1, domai


Domain annotation for each model (and alignments):
>> Glucan_synthase  1,3-beta-glucan synthase component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ! 1281.9   0.0         0         0       2     818 ..     780    1595 ..     779    1596 .. 0.97

  Alignments for each domain:
  == domain 1  score: 1281.9 bits;  conditional E-value: 0
  Glucan_synthase    2 fpknseaerRisfFaqslstplpealkvekmptFtvLiPhysEkillslkeiikeeekksrvtlleYLkqlypkeWknFvkdtkllaeekee 93  
                       f ++seaerRisfF+qsls++lpea++v kmp+FtvLiPhysEkillsl+eii+e++ +sr+tlleYLkqlyp++W++Fv+dtkl+a e + 
       EPX72951.1  780 FLATSEAERRISFFSQSLSANLPEAMPVPKMPSFTVLIPHYSEKILLSLREIIREQDPMSRITLLEYLKQLYPNDWNCFVQDTKLMAGEPNP 871 
                       7789**********************************************************************************999877 PP

  Glucan_synthase   94 ekeeeekk...eeellkekiedlpfyliGfkssepeytlrtriWaslrsqtLyrtvsGfmnYskalkllyrvenaslvellseesekleeel 182 
                        ++++e++   ++++ +   edlpfy+iGfks++peytlrtriWaslrsqtLyrt sG+mnYs+alkllyrve++ l e ++ + e+le+el
       EPX72951.1  872 MDSKHESSldgSKKKSNFLKEDLPFYCIGFKSNAPEYTLRTRIWASLRSQTLYRTASGMMNYSRALKLLYRVEHPALLEECNGNFERLEHEL 963 
                       755544441114444445579*********************************************************************** PP

  Glucan_synthase  183 eelaerKfklvvamqryakfkkeekenaelllkaypelkiayldeeaeeeeeekeyysvLidgsseideengkrkekyrirLsGnpilGdGK 274 
                       e++a rKf+l+++mqry+kf+++e en+e+ll+a+pel+iaylde+++e+ ee+++y++Li+g++ ++  ng+r +kyrirLsGnpilGdGK
       EPX72951.1  964 EQMAYRKFRLCLSMQRYSKFTRDEYENTEFLLRAHPELQIAYLDEDPAEDGEEPKVYATLINGFCPLE--NGRRLPKYRIRLSGNPILGDGK 1053
                       ******************************************************************75..********************** PP

  Glucan_synthase  275 sdnqnhaiiftRGeyiqviDanqdnyleEclKirsvLaefeeleleskkpyaeeiekeeekepvailGaREyiFsenigvLgdiaagkEqtF 366 
                       +dnqn+a+ f+RGey+qviDanqdny+eEclKirsvL+efee+++ +++pya+   +e+++ pva++G+REy+Fsen g+Lgd+aagkEqtF
       EPX72951.1 1054 ADNQNMALPFVRGEYLQVIDANQDNYIEECLKIRSVLSEFEEMDAVTTNPYAA---SEKANWPVAMVGSREYVFSENSGILGDVAAGKEQTF 1142
                       **************************************************985...56889******************************* PP

  Glucan_synthase  367 gtlfaRtlaeiggklHYGHPDflnaifmttRGGvsKaqkglhlnEDiyaGmnallRgGrikHseYiqcGKGRDlGfgsilnFttKigaGmgE 458 
                       gtlf+R+la iggklHYGHPDfln+ifmttRGGvsK qkglh+nEDiyaGmna++RgGrikH++Y+qcGKGRDlGfg+ilnFttKig+GmgE
       EPX72951.1 1143 GTLFSRSLALIGGKLHYGHPDFLNTIFMTTRGGVSKGQKGLHVNEDIYAGMNAMQRGGRIKHCDYFQCGKGRDLGFGTILNFTTKIGTGMGE 1234
                       ******************************************************************************************** PP

  Glucan_synthase  459 qlLsReyyylgtqlpldRfLsfyyahvGfhlnnllivlsvqlflllllnlgalekesiiceydkskkitdlekplgCynlkpvlewvkivvl 550 
                       q LsRey+ylgtqlp++R+Lsfyyah+Gfhlnn++i+ls+ql++++++nlga+ +++ icey++s  +++   p+gCy lkpvl+w++++++
       EPX72951.1 1235 QSLSREYFYLGTQLPFFRMLSFYYAHAGFHLNNVFIMLSMQLLMIVFVNLGAMYRTVPICEYQASGAVNQGLYPSGCYMLKPVLDWIRRCII 1326
                       ******************************************************************************************** PP

  Glucan_synthase  551 sifivffisflPllvqellergvlkavsrllkhllslsplfevfvcqiyaksllkdllfGgAkYiatGRgfavtrisfaelysrfasssiyk 642 
                       sif+vffisflPl+v++lle+g+l+a+srl+k+++s+sp+fevfv+q y++s++++l+fGgA+YiatGRg+a+tr++f++lysr++ ssiy 
       EPX72951.1 1327 SIFVVFFISFLPLIVHDLLEKGALRAISRLCKQIISFSPMFEVFVTQNYSQSIITNLTFGGARYIATGRGLATTRVPFSVLYSRYTGSSIYL 1418
                       ******************************************************************************************** PP

  Glucan_synthase  643 giellllllfatvtvwqaallyfwitvvslilaPflfnPhqfslldffvDyrdflrWlsrgnskskeesWisyvrqsrlritglkkkvlgee 734 
                       g++lll+l+f t+tvw ++++yfw+t+++l+++Pfl+nPhqfs+ dffvDyr+flrWlsrgnsk +++sWi ++r  r+ritg++kk+ g++
       EPX72951.1 1419 GARLLLMLFFGTMTVWSTHYVYFWCTMFALVICPFLYNPHQFSFVDFFVDYREFLRWLSRGNSKGHAHSWIGFCRLARTRITGVQKKQKGSP 1510
                       ******************************************************************************************** PP

  Glucan_synthase  735 sekeskdvkrasllnlllseiilellvvlllliaylfinsqtgvke.aeatnsvlrlaivsllpillnvvvllvlfalslllgpl 818 
                       s+k ++d+ ra+++nll++ei+++++v++++++ay+f+nsq g+++ ++++n ++r+ i+++lpi++++++l++ +++s++lgpl
       EPX72951.1 1511 SNKLAMDTPRARITNLLFTEIFVPAFVCFFTITAYTFMNSQPGLEDaSRSVNGFVRIWIMAALPIAISIAMLFISLLVSCCLGPL 1595
                       ********************************************65156899*****************************9987 PP

>> FKS1_dom1  1,3-beta-glucan synthase subunit FKS1, domain-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.7   4.0   2.2e-42     2e-38       2     128 ..     269     376 ..     268     377 .. 0.96

  Alignments for each domain:
  == domain 1  score: 131.7 bits;  conditional E-value: 2.2e-42
   FKS1_dom1   2 kvlqiaLylliWGEaanvRflpeclcyifkcaadyleseeakeeeeelkeleeileekvseaaaseeeesfLkkvitPlyevlrkqeaeknkegkyvrr 100
                 ++ q+aLyll+WGEa+nvRf+peclc+i+k a+dyl s ++ke+++ +                  ++  +L++ itPly++l++q++e+ +++kyvr+
  EPX72951.1 269 RIEQLALYLLCWGEANNVRFMPECLCFIYKLAYDYLISPQYKEQKDPA------------------PKDYYLDHCITPLYNLLHDQQYEI-RNQKYVRK 348
                 689***********************************9999999988..................999*********************.7777**** PP

   FKS1_dom1 101 ekdHskiigYDDlNelFWskegieklkl 128
                 ekdH++iigYDD+N++FW ++gi+++kl
  EPX72951.1 349 EKDHAEIIGYDDVNQMFWHSSGIKRIKL 376
                 *************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1822 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       608  (0.0339115); expected 358.6 (0.02)
Passed bias filter:                      299  (0.0166769); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.99u 0.31s 00:00:01.30 Elapsed: 00:00:00.49
# Mc/sec: 11220.02
//
Query:       EPX72952.1  [L=62]
Description: 40S ribosomal protein S30 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.9e-29  101.0   5.6    3.1e-29  100.9   5.6    1.0  1  Ribosomal_S30  Ribosomal protein S30


Domain annotation for each model (and alignments):
>> Ribosomal_S30  Ribosomal protein S30
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.9   5.6   1.7e-33   3.1e-29       1      56 [.       3      60 ..       3      62 .] 0.90

  Alignments for each domain:
  == domain 1  score: 100.9 bits;  conditional E-value: 1.7e-33
                   XTBX-STTTTHHHHHS-------------THHHHHHHHHHHTTS..SS--SSSSS-S- CS
  Ribosomal_S30  1 kvhGsLarAGKVrnqTPKveKqekkKkptGRakkRlqYnrRfvn..vvvggkkkkgpn 56
                   kvhGsLarAGKV++qTPKveKqek+K+p+GRa+kRl+Y rRfvn   ++ggk++++p+
     EPX72952.1  3 KVHGSLARAGKVKSQTPKVEKQEKPKQPKGRAYKRLLYVRRFVNvtNMAGGKRRMNPS 60
                   9*******************************************65566777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       403  (0.0224776); expected 358.6 (0.02)
Passed bias filter:                      251  (0.0139997); expected 358.6 (0.02)
Passed Vit filter:                         7  (0.000390429); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.27s 00:00:00.62 Elapsed: 00:00:00.41
# Mc/sec: 454.10
//
Query:       EPX72953.1  [L=708]
Description: CTD phosphatase Fcp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.8e-26   91.7   0.1    1.2e-25   90.1   0.0    1.9  2  NIF            NLI interacting factor-like phosphatase
    9.7e-07   28.6   0.0    2.4e-06   27.4   0.0    1.6  1  PTCB-BRCT      twin BRCT domain
    5.7e-05   23.4   0.0     0.0002   21.7   0.0    2.0  1  BRCT           BRCA1 C Terminus (BRCT) domain
    0.00046   20.0   0.0     0.0011   18.9   0.0    1.7  1  RTT107_BRCT_5  Regulator of Ty1 transposition protein 107 BRC
     0.0019   18.4   0.0      0.005   17.1   0.0    1.7  1  LIG3_BRCT      DNA ligase 3 BRCT domain
  ------ inclusion threshold ------
      0.029   14.1   0.0       0.63    9.7   0.0    2.3  2  Peptidase_C28  Foot-and-mouth virus L-proteinase
      0.067   13.6   0.0       0.24   11.9   0.0    2.0  1  BRCT_2         BRCT domain, a BRCA1 C-terminus domain


Domain annotation for each model (and alignments):
>> NIF  NLI interacting factor-like phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.1   0.0   4.8e-29   1.2e-25       2     141 ..     166     331 ..     165     342 .. 0.83
   2 ?   -2.5   0.0       1.5   3.9e+03     135     151 ..     434     450 ..     427     454 .. 0.82

  Alignments for each domain:
  == domain 1  score: 90.1 bits;  conditional E-value: 4.8e-29
         NIF   2 tLVLDLDetLvhskleks.k....................klkve....gekvevsvlkRpgldefLkelsklyevvifTasseeyaeavidildpekk 75 
                  L++DLD+t++h++++++ +                    +  ++    + +  +++++Rpgl+efL ++s++ye+ i+T++++ ya+++ + +dpe+k
  EPX72953.1 166 SLIVDLDQTIIHATVDPTvGewmsdpsnanyhllkdvrsfY--LQegfrTYSSRYYIKLRPGLQEFLARISNMYELHIYTMGTKAYAKEIAKLIDPEGK 262
                 69************977766888888888887777665441..22555566689********************************************* PP

         NIF  76 llshr.lyrescvkkkgeyvKdLsllgr.dlsrvvivDdspdsfelqpengipiksf.....fsdkkDneLlk 141
                 ++++r l+r+++    + + K+L+ l   d s vvi+Dd+ d +  +p n+i++ +f     ++d + n L k
  EPX72953.1 263 IFQDRvLSRDDS---GSLTQKSLQRLFPcDTSMVVIIDDRGDIWDWNP-NLIKVVPFeffvgIGDINSNFLAK 331
                 *****8889998...78999******888***************9976.888888886543333666666665 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.5
         NIF 135 kDneLlkllpllkelak 151
                  D+eLl+l ++l+ +++
  EPX72953.1 434 GDKELLHLERILTRIHQ 450
                 699********998876 PP

>> PTCB-BRCT  twin BRCT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   0.0   9.2e-10   2.4e-06      14      63 .]     502     552 ..     488     552 .. 0.94

  Alignments for each domain:
  == domain 1  score: 27.4 bits;  conditional E-value: 9.2e-10
                 HHHHHHHHHTT-EEESSEETT-SEEEECSS-CHHHHHHHHCT.-EEE-CHH CS
   PTCB-BRCT  14 kslqklieamGaeyskdltksvTHLicksgeGekyekAkkwg.ipvVsveW 63 
                 +++ k   ++Ga+++ d+ +s THLi+++ + ek + A ++g ++vV+++W
  EPX72953.1 502 SDIAKWAMSFGAQIVLDFDQSPTHLIAAKIRTEKVKTAINMGsVRVVKLNW 552
                 6777888899***************************************** PP

>> BRCT  BRCA1 C Terminus (BRCT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   7.8e-08    0.0002       2      79 .]     478     557 ..     477     557 .. 0.90

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 7.8e-08
                 TTTTTTTEEEEE....EESTSSHHHHHHHHHHHHTTCEEESSCSTTSSEEEESSSHSHHHHHHHHHHTT.SEEEETHHHHHHH CS
        BRCT   2 kellfhgckfvi....tgvldnftrdeleelikehGGkvttevskktthlvvgepesrslkylealkln.ipivheewlldci 79 
                 k+++++gc + +    + + d f  d ++  + ++G+ ++ ++++  thl++ +   r++k+++a++ + +++v+ +wl d+i
  EPX72953.1 478 KSKVLKGCRILFsgviPLGIDVFSSDIAK-WAMSFGAQIVLDFDQSPTHLIAAKI--RTEKVKTAINMGsVRVVKLNWLTDSI 557
                 68999*******99988888888877777.*************************..99999999998758**********97 PP

>> RTT107_BRCT_5  Regulator of Ty1 transposition protein 107 BRCT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   4.1e-07    0.0011      41     100 .]     510     570 ..     455     570 .. 0.89

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 4.1e-07
                    HTTEEE-SGCCT.-SEEE-SS---SHHHHHHCCCTT.EEE-CHHHHHHHHHTS---SGGGB- CS
  RTT107_BRCT_5  41 klGikivqeakk.cntliApkilRTeKFLksLskap.kilspdfiedvLkkkklldleeyll 100
                    + G +iv + ++  ++liA ki RTeK  +++ +++  +++ ++++d ++  + l +++yll
     EPX72953.1 510 SFGAQIVLDFDQsPTHLIAAKI-RTEKVKTAINMGSvRVVKLNWLTDSISAWERLSESNYLL 570
                    6799999998888******986.***************************888889999975 PP

>> LIG3_BRCT  DNA ligase 3 BRCT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0     2e-06     0.005      22      77 ..     503     558 ..     482     562 .. 0.79

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 2e-06
   LIG3_BRCT  22 klrRYfiAydGdlvkeekekeaTHvvvskke.eskkekeksknakaVtaewiwesIk 77 
                  + ++ + +++++v  +  +++TH ++ k + e++k++ +  ++++V  +w+ +sI 
  EPX72953.1 503 DIAKWAMSFGAQIVL-DFDQSPTHLIAAKIRtEKVKTAINMGSVRVVKLNWLTDSIS 558
                 6778999*******9.66789*******9884555666666789************7 PP

>> Peptidase_C28  Foot-and-mouth virus L-proteinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   0.00025      0.63      56     126 ..      63     134 ..      14     149 .. 0.76
   2 ?    1.9   0.0     0.063   1.6e+02     139     180 ..     274     315 ..     232     331 .. 0.76

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00025
  Peptidase_C28  56 ilqlfryvdepflewvydspenl..tleainkleeitglelheggppalvvwnikhllytgigtasrpsevcm 126
                    i q+   v+  +++w   + e+l   l+ i kl e    e+h gg  a+   ni    y g    +r + + m
     EPX72953.1  63 IEQFECPVEGELVQWEVKNDEQLdsNLKVIAKLHEPCTHEVHYGGLCAICGENITSQDYMGYSDMARAN-ISM 134
                    4444456778889998888887733699********************************999888864.444 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.063
  Peptidase_C28 139 agiflkgqdhavfacvtsdgwyaiddedfypwtpnpadvlvf 180
                    +g + +   + +f c ts      d  d++ w pn   v+ f
     EPX72953.1 274 SGSLTQKSLQRLFPCDTSMVVIIDDRGDIWDWNPNLIKVVPF 315
                    555555556678999999887766778********9988766 PP

>> BRCT_2  BRCT domain, a BRCA1 C-terminus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   9.2e-05      0.24      25      85 .]     505     569 ..     500     569 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 9.2e-05
      BRCT_2  25 kklIeknGGevvetitsavyiviaesneee....laekrkrrvvspkyIkdCikkgkllplenyl 85 
                 +k   ++G ++v + +++ +++ia++  +e    ++   + rvv+ ++++d+i++ + l+ +nyl
  EPX72953.1 505 AKWAMSFGAQIVLDFDQSPTHLIAAKIRTEkvktAINMGSVRVVKLNWLTDSISAWERLSESNYL 569
                 55667899999999999999999999998899988888999**********************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (708 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1288  (0.0718389); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.67u 0.28s 00:00:00.95 Elapsed: 00:00:00.48
# Mc/sec: 4398.01
//
Query:       EPX72954.1  [L=257]
Description: rhomboid family protease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.5e-09   35.8  12.0    7.5e-09   35.8  12.0    1.9  2  Rhomboid  Rhomboid family


Domain annotation for each model (and alignments):
>> Rhomboid  Rhomboid family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.2     0.054   9.7e+02     107     122 ..      28      43 ..      12      60 .. 0.52
   2 !   35.8  12.0   4.2e-13   7.5e-09       6     137 ..      62     194 ..      57     210 .. 0.78

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.054
                 CCCCCCCCCCHHHCTS CS
    Rhomboid 107 lllfillnlvlgllpr 122
                  ++++l+ +v g+l+ 
  EPX72954.1  28 TVVVALITFVCGILNI 43 
                 3333333333333322 PP

  == domain 2  score: 35.8 bits;  conditional E-value: 4.2e-13
                 -TTHHHHGGG--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.....HHHHHHHHHHHHH-S...-EESSHHHHHHHHHHHHHHHHCCCCGS-- CS
    Rhomboid   6 elwrlltsmflHagwlHllfNmlallvfGsplerrlGslrflllyll.....sglagsllsllfsaesesplvGaSGaifgllgallvlvprnrkllrk 99 
                 ++++l t+ ++H g+l +lf ++ ++++++++err+G+l  +++++       g+a  ++ ++ ++++  ++vG SG+ f+ll ++l++ +   +    
  EPX72954.1  62 RFHTLNTYPLVHHGFLTFLFGLAGIFFLMPRFERRYGTLCTIAMFFGfleaiPGIAFLIACYVSKSDT--VFVGISGWTFSLLTMYLMNLFYDLHPKVL 158
                 5778999**************************************99777777888888888888887..**********************9999998 PP

                 --HC...CCCCCCCCCCHHHCTSSSTTTHHHHHHHHHH CS
    Rhomboid 100 liiallllllfillnlvlgllpraggvsnlAHlgGlla 137
                 ++++l+ ++l i+    + +lp + + s + H++ ++ 
  EPX72954.1 159 ALPQLVRMVLAIAAP--MLILPFDFSESVVLHITAVIL 194
                 988855555444444..444444433455555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       797  (0.0444531); expected 358.6 (0.02)
Passed bias filter:                      289  (0.0161191); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.28s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 1759.78
//
Query:       EPX72955.1  [L=310]
Description: hypothetical protein SOCG_00715 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.1e-17   61.8  11.9    4.6e-15   55.8   3.7    2.8  3  zf-C2H2_2     C2H2 type zinc-finger (2 copies)
  ------ inclusion threshold ------
      0.023   15.0  20.2        3.1    8.2   0.3    4.3  4  zf-Di19       Drought induced 19 protein (Di19), zinc-binding
      0.051   14.3   6.4        1.4    9.6   0.1    3.4  4  zf-C2H2_3rep  Zinc finger C2H2-type, 3 repeats
       0.26   11.2   4.1        1.6    8.7   0.4    3.1  3  PyrI_C        Aspartate carbamoyltransferase regulatory chain
       0.77   10.8  27.7       0.35   11.8   0.9    5.3  5  zf-C2H2_4     C2H2-type zinc finger
        3.8    7.7   6.0        1.7    8.9   1.0    2.6  3  Fer4_9        4Fe-4S dicluster domain
        7.1    6.8   9.1        6.7    6.8   0.2    3.2  3  Elf1          Transcription elongation factor Elf1 like


Domain annotation for each model (and alignments):
>> zf-C2H2_2  C2H2 type zinc-finger (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1      0.82   2.1e+03       5      28 ..       8      31 ..       3      55 .. 0.66
   2 !   55.8   3.7   1.8e-18   4.6e-15       1      96 [.      90     181 ..      88     186 .. 0.89
   3 !   10.5   0.2   0.00024      0.61       1      36 [.     221     255 ..     220     273 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.82
   zf-C2H2_2  5 cekkskeveellehmskkhgffip 28
                ce +  +  el++h+++ h++ ++
  EPX72955.1  8 CESQGYHPIELIHHLETVHEIPLS 31
                444444456899999999987665 PP

  == domain 2  score: 55.8 bits;  conditional E-value: 1.8e-18
   zf-C2H2_2   1 eClfcekkske.veellehmskkhgffipereylvdleglleylrekieekleClyCekefkslealreHmkkkgHckineeeeeekkeiekfydfl 96 
                 +Clfc+ k    ++e+++h ++ h+++i  ++++v+ + +l+++++ +++ + Cl+C+++f++ ++l +Hm kk+H ++n ++    +++++ y ++
  EPX72955.1  90 QCLFCDPKYLFtRDEWFKHSFDVHELNIGLSDNVVYFDLFLSKMKKVLQR-FFCLFCSSSFTNADTLYDHMYKKRHFRLNSKS----SKYDEHYIVN 181
                 5****9885544**********************************9999.****************************8766....6677777665 PP

  == domain 3  score: 10.5 bits;  conditional E-value: 0.00024
   zf-C2H2_2   1 eClfcekkskeveellehmskkhgffipereylvdl 36 
                 +C+fce++  e ee+++h ++ h+ ++p+ ++l +l
  EPX72955.1 221 KCVFCEER-LEPEECIRHCKTIHNWDLPSIQKLYNL 255
                 5*******.889****************98888743 PP

>> zf-Di19  Drought induced 19 protein (Di19), zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.8    0.0014       3.7       4      26 ..       3      27 ..       1      32 [. 0.91
   2 ?    3.3   0.4      0.04     1e+02       2      26 ..      88     114 ..      87     117 .. 0.84
   3 ?    8.2   0.3    0.0012       3.1       1      24 [.     138     162 ..     138     171 .. 0.78
   4 ?    7.6   1.3    0.0019       4.8       4      26 ..     221     243 ..     219     248 .. 0.91

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0014
     zf-Di19  4 tCPy.Cgk.eltvkeLveHvedeHr 26
                 CP+ C+  +++  eL++H+e+ H 
  EPX72955.1  3 SCPFdCESqGYHPIELIHHLETVHE 27
                7***9*9978************996 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.04
     zf-Di19   2 sftCPyCgk.e.ltvkeLveHvedeHr 26 
                 +f+C +C     +t +e  +H  d H 
  EPX72955.1  88 QFQCLFCDPkYlFTRDEWFKHSFDVHE 114
                 79******74569*******9988886 PP

  == domain 3  score: 8.2 bits;  conditional E-value: 0.0012
     zf-Di19   1 esftCPyCgke.ltvkeLveHvede 24 
                 + f C +C+ +  ++++L++H++++
  EPX72955.1 138 QRFFCLFCSSSfTNADTLYDHMYKK 162
                 5799******8255789****9876 PP

  == domain 4  score: 7.6 bits;  conditional E-value: 0.0019
     zf-Di19   4 tCPyCgkeltvkeLveHvedeHr 26 
                 +C +C++ l+ +e ++H+++ H 
  EPX72955.1 221 KCVFCEERLEPEECIRHCKTIHN 243
                 799*****************997 PP

>> zf-C2H2_3rep  Zinc finger C2H2-type, 3 repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1       4.1   1.1e+04      38      58 ..       8      28 ..       2      36 .. 0.74
   2 ?    5.4   0.1     0.011        27      26      62 ..      82     119 ..      68     125 .. 0.71
   3 ?    9.6   0.1   0.00055       1.4      33      66 ..     140     171 ..     129     209 .. 0.69
   4 ?    0.4   0.0      0.38   9.7e+02      32      63 ..     219     249 ..     213     282 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 4.1
  zf-C2H2_3rep 38 cgshfgnaeelwlhvlsvhps 58
                  c s   +  el  h+ +vh  
    EPX72955.1  8 CESQGYHPIELIHHLETVHEI 28
                  666666777888899998865 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.011
  zf-C2H2_3rep  26 fveqclllqcipcgshf.gnaeelwlhvlsvhpsdfkl 62 
                    v + + +qc+ c  ++    +e ++h + vh  ++ l
    EPX72955.1  82 AVGKEKQFQCLFCDPKYlFTRDEWFKHSFDVHELNIGL 119
                   56777788999998765156778888999999877665 PP

  == domain 3  score: 9.6 bits;  conditional E-value: 0.00055
  zf-C2H2_3rep  33 lqcipcgshfgnaeelwlhvlsvhpsdfklskva 66 
                   + c+ c s f+na+ l+ h+       f+l   +
    EPX72955.1 140 FFCLFCSSSFTNADTLYDHMYKKRH--FRLNSKS 171
                   5699***************976543..3333222 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.38
  zf-C2H2_3rep  32 llqcipcgshfgnaeelwlhvlsvhpsdfkls 63 
                   + +c+ c   + + ee   h  ++h+ d+ + 
    EPX72955.1 219 IAKCVFCEERL-EPEECIRHCKTIHNWDLPSI 249
                   56899999886.6788999****999887654 PP

>> PyrI_C  Aspartate carbamoyltransferase regulatory chain, metal binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.1     0.074   1.9e+02      30      43 ..      85      98 ..      76     103 .. 0.80
   2 ?   -1.1   0.0      0.74   1.9e+03      32      45 ..     138     151 ..     127     153 .. 0.75
   3 ?    8.7   0.4   0.00063       1.6      27      46 ..     213     232 ..     202     234 .. 0.81

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.074
                TTTEEEETTT--EE CS
      PyrI_C 30 ekvklkCkYCekei 43
                ++ +++C +C+ ++
  EPX72955.1 85 KEKQFQCLFCDPKY 98
                6789******9765 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.74
                 TEEEETTT--EEEH CS
      PyrI_C  32 vklkCkYCekeise 45 
                  ++ C +C   +++
  EPX72955.1 138 QRFFCLFCSSSFTN 151
                 56789999998876 PP

  == domain 3  score: 8.7 bits;  conditional E-value: 0.00063
                 EETTTTEEEETTT--EEEHH CS
      PyrI_C  27 edkekvklkCkYCekeisee 46 
                 ed e+++ kC +Ce+ ++ e
  EPX72955.1 213 EDAEPLIAKCVFCEERLEPE 232
                 7899**********998866 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.7     0.044   1.1e+02       3      24 .]       4      26 ..       2      26 .. 0.71
   2 ?   -0.4   0.0       1.2     3e+03      10      22 ..      38      50 ..      36      51 .. 0.80
   3 ?    6.4   1.3    0.0079        20       1      24 []      89     113 ..      89     113 .. 0.82
   4 ?   11.8   0.9   0.00014      0.35       1      22 [.     140     161 ..     140     163 .. 0.92
   5 ?    3.8   2.4     0.053   1.4e+02       2      24 .]     221     242 ..     220     242 .. 0.94

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.044
   zf-C2H2_4  3 Cpi.C.gksFsskkaLlrHlkthH 24
                Cp+ C ++ +  + +L +Hl+t+H
  EPX72955.1  4 CPFdCeSQGY-HPIELIHHLETVH 26
                7777755555.55559******99 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 1.2
   zf-C2H2_4 10 FsskkaLlrHlkt 22
                F +  ++l+Hlkt
  EPX72955.1 38 FLCAPEILHHLKT 50
                67777899**997 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.0079
   zf-C2H2_4   1 fkCpiC.gksFsskkaLlrHlkthH 24 
                 f+C +C +k   +++++ +H   +H
  EPX72955.1  89 FQCLFCdPKYLFTRDEWFKHSFDVH 113
                 89****6555559999****88877 PP

  == domain 4  score: 11.8 bits;  conditional E-value: 0.00014
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlkt 22 
                 f C +C+ sF++ ++L +H+ +
  EPX72955.1 140 FFCLFCSSSFTNADTLYDHMYK 161
                 78******************76 PP

  == domain 5  score: 3.8 bits;  conditional E-value: 0.053
   zf-C2H2_4   2 kCpiCgksFsskkaLlrHlkthH 24 
                 kC +C ++   +++  rH+kt H
  EPX72955.1 221 KCVFCEERL-EPEECIRHCKTIH 242
                 7********.99999*****988 PP

>> Fer4_9  4Fe-4S dicluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.31     8e+02      22      39 ..      77      94 ..      64      96 .. 0.66
   2 ?   -3.5   0.0         5   1.3e+04      35      40 ..     141     146 ..     131     147 .. 0.65
   3 ?    8.9   1.0   0.00066       1.7      12      48 ..     192     240 ..     189     242 .. 0.71

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.31
      Fer4_9 22 aerkarlraaseeaCigC 39
                ++ ++++ ++++ +C++C
  EPX72955.1 77 QQIERAVGKEKQFQCLFC 94
                44444445555589**99 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 5
      Fer4_9  35 aCigCg 40 
                  C++C 
  EPX72955.1 141 FCLFCS 146
                 488885 PP

  == domain 3  score: 8.9 bits;  conditional E-value: 0.00066
      Fer4_9  12 Cpagvvvedaaerkarlraase......eaCigCga......CveaCpk 48 
                 C a+    d++  +   ++ +e       +C++C++      C+ +C++
  EPX72955.1 192 CSANGPLADENDSETVSDINDEdaepliAKCVFCEErlepeeCIRHCKT 240
                 555555444444444444444467889999*****************86 PP

>> Elf1  Transcription elongation factor Elf1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.2    0.0026       6.7      11      29 ..      79      96 ..      70     101 .. 0.67
   2 ?    3.8   0.4     0.023        59      14      30 ..     132     148 ..     129     154 .. 0.83
   3 ?   -0.2   0.2      0.41   1.1e+03      45      56 ..     219     230 ..     202     244 .. 0.76

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0026
        Elf1 11 kkkkkkklptkFdCpfCnh 29
                +++ +   +++F+C+fC+ 
  EPX72955.1 79 IER-AVGKEKQFQCLFCDP 96
                333.34469********86 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.023
        Elf1  14 kkkklptkFdCpfCnhe 30 
                 k kk+ ++F C+fC+++
  EPX72955.1 132 KMKKVLQRFFCLFCSSS 148
                 4677999*******975 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.41
        Elf1  45 evsCkvCgesfe 56 
                 +++C  C+e++e
  EPX72955.1 219 IAKCVFCEERLE 230
                 678888888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       660  (0.0368119); expected 358.6 (0.02)
Passed bias filter:                      431  (0.0240393); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 2093.58
//
Query:       EPX72956.1  [L=320]
Description: Atg8 deconjugator Atg4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      9e-69  231.9   0.0    1.5e-68  231.3   0.0    1.3  1  Peptidase_C54  Peptidase family C54
    0.00065   19.2   0.1      0.062   12.8   0.0    2.7  3  Peptidase_C78  Peptidase family C78


Domain annotation for each model (and alignments):
>> Peptidase_C54  Peptidase family C54
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  231.3   0.0   1.6e-72   1.5e-68       2     274 ..      42     284 ..      41     286 .. 0.94

  Alignments for each domain:
  == domain 1  score: 231.3 bits;  conditional E-value: 1.6e-72
  Peptidase_C54   2 eeflkdfesriwltYRkeFppieksgltsDaGWGCmlRsgQmllaqalllhllgrdwrreeksekkeeetyrkilslFlDkpsapfSihrlvkigk 97 
                    eefl d  s i +tYR++ + +e  +l sDaGWGCm+Rs+Q lla+++ +++               e+   +i++lF+D+p apfSih++v++gk
     EPX72956.1  42 EEFLLDSFSLITITYRSGIEGLE--NLASDAGWGCMIRSTQTLLANTIRKLY--------------PEKPFFSIVNLFADEPAAPFSIHQFVSVGK 121
                    68999999***************..9**********************9887..............2456789*********************** PP

  Peptidase_C54  98 .slgkkvgeWfgPstvaqilkklvekakeeaglkvyvaqdssvvykddvkklakeskkekeekkwkpvlilvplrlGldkvnpkyvealkellklk 192
                     +++  +g+WfgPs+ + ++++l+e +++  +l+vyva++ + vy+d++             +k  p+l+l+p+rlG+d vn++y+e++ ++++++
     EPX72956.1 122 qACDIPPGQWFGPSASSACVSRLCE-QYDGLDLNVYVAKHGTSVYRDQLF------------QKPFPILLLIPTRLGIDAVNEIYYEQILRVFEIP 204
                    99***********************.88889**********99******5............23479***************************** PP

  Peptidase_C54 193 qsvGiiGGrpksslYfvgvqedkliyLDPHtvqeavedeaeseeelssfhckkprklsiskldpslllgflckdeedfedlv 274
                    ++vGi GGrp+s++Yf + q+++l+yLDPH++ +a   ++++ ++ ++fh+ ++r++s+++ldp +++gfl+++ ++ e++ 
     EPX72956.1 205 SFVGITGGRPRSAHYFYARQNHQLFYLDPHCTFSAH--TTTQPASEDTFHTASLRRISLQELDPCMVFGFLLRNSDEAEEFE 284
                    *******************************99998..68888999*******************************99986 PP

>> Peptidase_C78  Peptidase family C78
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.0   6.9e-06     0.062      20      51 ..      68      98 ..      63     104 .. 0.86
   2 ?   -0.9   0.0      0.11   9.6e+02     166     189 ..     224     247 ..     219     270 .. 0.64
   3 !    2.9   0.1    0.0071        64     110     142 ..     278     307 ..     254     313 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 6.9e-06
                   --TTTTHHHHHHHHHHHHHHHTTS-SS-.... CS
  Peptidase_C78 20 edkGwgCgYRnlQmllSwlleskeeakevlfe 51
                    d+GwgC  R+ Q+ll   +++ +++k  +f+
     EPX72956.1 68 SDAGWGCMIRSTQTLLANTIRKLYPEKP-FFS 98
                   79*******************9999998.444 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.11
                    S-EEEEEE--S--SSS-.HHHHHC CS
  Peptidase_C78 166 gelnlLvlDPhftgaeeikklvek 189
                    ++ +l  lDPh+t +++++ + ++
     EPX72956.1 224 QNHQLFYLDPHCTFSAHTTTQPAS 247
                    45688999**99976654443333 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.0071
                    SSHHHH...HHTHHHHHHHHH..........HT CS
  Peptidase_C78 110 kstgeleahaelleevanyFesleesskvlqtn 142
                    ++ +e+e+h+++++ + +yF+   ++ kv  ++
     EPX72956.1 278 DEAEEFEQHQKKIADIVQYFD---VEPKVFDSH 307
                    788999**************9...566665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       433  (0.0241508); expected 358.6 (0.02)
Passed bias filter:                      405  (0.0225891); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2362.97
//
Query:       EPX72957.1  [L=106]
Description: signal recognition particle subunit Srp14 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.7e-18   64.7   1.4    7.9e-18   64.6   0.0    1.6  2  SRP14          Signal recognition particle 14kD protein
  ------ inclusion threshold ------
      0.067   12.9   0.1      0.089   12.5   0.1    1.2  1  Thioredoxin_5  Thioredoxin


Domain annotation for each model (and alignments):
>> SRP14  Signal recognition particle 14kD protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.6   0.0   8.8e-22   7.9e-18       1      96 []       3      86 ..       3      86 .. 0.91
   2 ?   -2.5   1.3      0.78     7e+03      59      64 ..      93      98 ..      87     105 .. 0.42

  Alignments for each domain:
  == domain 1  score: 64.6 bits;  conditional E-value: 8.8e-22
       SRP14  1 lsndeFlteLtelfeksrekgkgsVyltqKrlteakkaeskeeeesseekeykcLiRatdgkkkkkvkisTvVeakdlekFqarYaevlkagmdgL 96
                lsn+++l++L+e +++ + kg +s yl+qK+  +      +   +++++++ ++L+Ra++g +    kisTvV+a++++ F+ +Yaev+k gm gL
  EPX72957.1  3 LSNEQYLAQLAEHLRQLQGKGASSLYLSQKK--N------P-VFDDEQNAKPSVLLRAKNGANW---KISTVVNAENFTDFFGKYAEVCKGGMIGL 86
                89*****************************..2......2.2344567899*********999...**************************887 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.78
       SRP14 59 tdgkkk 64
                +++kkk
  EPX72957.1 93 KNKKKK 98
                122222 PP

>> Thioredoxin_5  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   9.9e-06     0.089      72     123 ..       5      55 ..       2      67 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 9.9e-06
  Thioredoxin_5  72 sssYlaslaiKAAelQgkkkgrkFLrklqealflekkniskeellleiaeka 123
                    +++Yla la    +lQgk +++ +L + ++ +f +++n +   +ll + + a
     EPX72957.1   5 NEQYLAQLAEHLRQLQGKGASSLYLSQKKNPVFDDEQNAKP-SVLLRAKNGA 55 
                    689***********************************999.7777766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       713  (0.039768); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.27s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 746.88
//
Query:       EPX72958.1  [L=426]
Description: AMSH protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.1e-18   65.2   0.1    1.9e-17   63.3   0.0    1.9  2  JAB         JAB1/Mov34/MPN/PAD-1 ubiquitin protease
    5.6e-06   26.1   0.0    9.1e-06   25.4   0.0    1.3  1  Prok-JAB    Prokaryotic homologs of the JAB domain
    0.00031   20.9   0.4    0.00063   19.9   0.4    1.5  1  USP8_dimer  USP8 dimerisation domain


Domain annotation for each model (and alignments):
>> JAB  JAB1/Mov34/MPN/PAD-1 ubiquitin protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1      0.33     2e+03      45      82 ..      83     117 ..      68     127 .. 0.65
   2 !   63.3   0.0   3.3e-21   1.9e-17       4     117 ..     253     358 ..     250     359 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.33
                 EEEEEEEESEEEESSECEEEEEHHHHHHHHHHHHHHHC CS
         JAB  45 eitnvfalpfeetekdvdavsldqeylekksellkklr 82 
                 + +++f++  +++ ++   ++l +  +ek++e++kk +
  EPX72958.1  83 QLFEYFQIVKNDVLQE---IELLKPLVEKQYEEHKKRQ 117
                 5677777777777777...4444444556666666654 PP

  == domain 2  score: 63.3 bits;  conditional E-value: 3.3e-21
                 CEEEEEHHHHHHHHHHHHHHHHHTS--EEEEEEEESSSEEEEEEEEEEESEEEESSECEEEEEHHHHHHHHHHHHHHHCTTSEEEEEEEESSSS-SS-- CS
         JAB   4 qavhleslvllkildhalrtekeeeevmGlliGelnddttveitnvfalpfeetekdvdavsldqeylekksellkklrgrervvGWYhshpditvwls 102
                 ++v l +    k+l++a+ ++k+  e++G+l+G+l+++  + it+ ++  +e t++++ + ++         ++ +k   ++ ++GW+h+hp++t+++s
  EPX72958.1 253 RTVYLPKSLKSKFLRIAEPNTKKRLETCGILCGKLRQN-AFFITQLVIPSQEATTDTCGTTDETAL-----FDYQDK--HDLLTLGWIHTHPTQTCFMS 343
                 7899999999****************************.888***************999998887.....333333..357799************** PP

                 HHHHHHHHHHHHHST CS
         JAB 103 evdvrtqalyqrmde 117
                 +vd++t+++yq m +
  EPX72958.1 344 SVDLHTHCSYQLMLP 358
                 ***********9987 PP

>> Prok-JAB  Prokaryotic homologs of the JAB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.0   1.5e-09   9.1e-06      16      94 ..     275     352 ..     258     377 .. 0.70

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 1.5e-09
    Prok-JAB  16 hpeEtcGlllgkeseseevivvplvnewsn...rfeipdpedslarlkfearerglevvgiwHSHpggsarPSetDrrdaaa 94 
                 +  EtcG+l gk  +++   ++ lv  +s+    ++   ++d  a  +   ++++l ++g +H+Hp+   + S+ D+++++ 
  EPX72958.1 275 KRLETCGILCGKL-RQNAFFITQLVI-PSQeatTDTC-GTTDETALFD-YQDKHDLLTLGWIHTHPTQTCFMSSVDLHTHCS 352
                 678*********8.555555555553.3333554444.4444444444.888*************************99876 PP

>> USP8_dimer  USP8 dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.4     1e-07   0.00063      25     114 ..      25     112 ..      11     113 .. 0.83

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 1e-07
  USP8_dimer  25 dkknksikrllrsaeklfkkAeeyrlegdeEkAYvlymkylnllelIrkksdykekkasvkellgdkkankvildklekLkesLkkrYee 114
                  + n ++k+ lr+++ ++k+A +y le+d  +   l+++y  l+ + +++++ +   ++  e  +  k n  +l++ e Lk   +k+Yee
  EPX72958.1  25 FNANLPLKNWLRTSQTILKQAHVYVLEKDYSNGIFLLIRYSELFLKCQQHPESQGYRKQLFEYFQIVK-ND-VLQEIELLKPLVEKQYEE 112
                 56788999*******************************************98877777777444444.44.489999999999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (426 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       837  (0.0466841); expected 358.6 (0.02)
Passed bias filter:                      559  (0.0311785); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 2949.91
//
Query:       EPX72959.1  [L=126]
Description: zinc finger protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.7e-09   36.6   0.5    3.7e-09   36.6   0.5    1.8  2  zf-C2H2_jaz   Zinc-finger double-stranded RNA-binding
  ------ inclusion threshold ------
      0.012   16.2   0.4      0.023   15.4   0.1    1.5  2  zf-C2H2_3rep  Zinc finger C2H2-type, 3 repeats
      0.041   14.2   0.9       0.05   13.9   0.3    1.4  1  zf-C2H2_2     C2H2 type zinc-finger (2 copies)


Domain annotation for each model (and alignments):
>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.9      0.99   5.9e+03      18      27 .]       8      17 ..       5      17 .. 0.69
   2 !   36.6   0.5   6.2e-13   3.7e-09       1      27 []      55      81 ..      55      81 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.99
                 HCCTTSHHHH CS
  zf-C2H2_jaz 18 dnHlkSKkHK 27
                 ++H +  +H+
   EPX72959.1  8 RKHRNNGNHR 17
                 6788877775 PP

  == domain 2  score: 36.6 bits;  conditional E-value: 6.2e-13
                 ECBBTTTTBBBSSHHHHHCCTTSHHHH CS
  zf-C2H2_jaz  1 qfYCvlCdKyFksenaldnHlkSKkHK 27
                 q YCv+C+++F +++al+ H++SK H+
   EPX72959.1 55 QNYCVECARHFATDEALRLHKRSKVHR 81
                 78************************7 PP

>> zf-C2H2_3rep  Zinc finger C2H2-type, 3 repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       1.1   6.4e+03      91     112 ..       8      29 ..       3      35 .. 0.66
   2 ?   15.4   0.1   3.9e-06     0.023      35      95 ..      58     120 ..      54     125 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 1.1
  zf-C2H2_3rep  91 nnsenesgvrkfvcrfcGlkfd 112
                    +++n+++ r +  r+ G  +d
    EPX72959.1   8 RKHRNNGNHRLYRTRVYGRDLD 29 
                   5566777777777777766555 PP

  == domain 2  score: 15.4 bits;  conditional E-value: 3.9e-06
  zf-C2H2_3rep  35 cipcgshfgnaeelwlhvls.vhpsdfklskvaqkknls.asedssqklelsksasvennsen 95 
                   c+ c  hf+  e l lh  s vh   +k +k    ++ + ++    +++++ +s+ v++n+e 
    EPX72959.1  58 CVECARHFATDEALRLHKRSkVHRRRLKDLKEPAYSQEEaEAAVNIAHPKPGTSSDVNQNQEP 120
                   *****************86549*9999888766533332033334677888888888877765 PP

>> zf-C2H2_2  C2H2 type zinc-finger (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.3   8.4e-06      0.05      50      83 ..      55      88 ..      35      99 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 8.4e-06
   zf-C2H2_2 50 kleClyCekefkslealreHmkkkgHckineeee 83
                ++ C+ C ++f + ealr H ++k H++  ++ +
  EPX72959.1 55 QNYCVECARHFATDEALRLHKRSKVHRRRLKDLK 88
                589************************9866544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       698  (0.0389313); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.27s 00:00:00.68 Elapsed: 00:00:00.45
# Mc/sec: 844.95
//
Query:       EPX72960.1  [L=74]
Description: hypothetical protein SOCG_05737 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       502  (0.0279993); expected 358.6 (0.02)
Passed bias filter:                      296  (0.0165096); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.27s 00:00:00.64 Elapsed: 00:00:00.42
# Mc/sec: 524.28
//
Query:       EPX72961.1  [L=556]
Description: CAMK/CAMKL/GIN4 protein kinase Cdr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.3e-69  233.7   0.0      4e-69  232.9   0.0    1.4  1  Pkinase        Protein kinase domain
    1.4e-33  116.3   0.0    2.3e-33  115.6   0.0    1.3  1  Pkinase_Tyr    Protein tyrosine kinase
    0.00049   19.2   0.1    0.00085   18.4   0.1    1.4  1  Haspin_kinase  Haspin like kinase domain
  ------ inclusion threshold ------
      0.066   13.1   0.0       0.32   10.9   0.0    1.8  2  APH            Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  232.9   0.0   8.8e-73     4e-69       3     264 .]      14     258 ..      12     258 .. 0.93

  Alignments for each domain:
  == domain 1  score: 232.9 bits;  conditional E-value: 8.8e-73
                 EEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHHHH CS
     Pkinase   3 kleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseeeak 101
                   ++lG+Gs+++V  a++ ++g+  AvK++  ++ +        +Ei +++ l+hpni++ly+v+++++++yl leyv+ggel+d+++++g+lse+++ 
  EPX72961.1  14 LGKTLGTGSTSCVRLAKHVKSGELAAVKILPIKNVSV------GMEILMMRLLHHPNILQLYDVWTDHQNMYLALEYVPGGELFDYVRKHGALSEKDVA 106
                 5789**************************9997775......569***************************************************** PP

                 HHHHHHHHHHHHHHHTTEE-SS-SGGGEEEE.TTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHHTTSCB.SHHHHHHHHHHHHHHHHHSS-STT CS
     Pkinase 102 kiakqilegleylHskgiiHrDlKpeNiLid.ekgelKitDFGlakelessskltsfvgtseYlAPEvlkeney.skkvDvWslGvilyelltgkppfs 198
                 +++ q+l +l+++H+ ++ HrDlK eNiLi+  ++++Ki+DFG+a+    +s lt+f+g+ +YlAPEv+++++y ++++D+Ws+Gvi+y ll++k pf 
  EPX72961.1 107 HYMVQLLDALSHCHQFRFRHRDLKLENILINpYERVIKIADFGMATVEPDNSFLTNFCGSLHYLAPEVVSHTPYqGAPADIWSCGVIFYALLSNKLPFG 205
                 *******************************99999**************999********************************************** PP

                 TSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 199 gekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 g+++       +d      kil   + +++ + ++s  a+dll+k+l+++p++R+t+ e+l+hpy+
  EPX72961.1 206 GTSTGV----VYD------KIL---NGAYDLPCSCSTAAQDLLHKMLNVNPSNRITIPEILNHPYI 258
                 444443....333......344...34789999*******************************97 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.6   0.0   5.1e-37   2.3e-33       3     257 ..      14     254 ..      12     255 .. 0.91

  Alignments for each domain:
  == domain 1  score: 115.6 bits;  conditional E-value: 5.1e-37
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTS CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekekl 100
                  lgk+lG G+ + V  ++      k+ +  avK+l       ++ ++  e+ +m+ l+hpni++l+ v t+++++++ +eyv+gG+L +++rk+   +l
   EPX72961.1  14 LGKTLGTGSTSCVRLAKHV----KSGELAAVKILP-----IKNVSVGMEILMMRLLHHPNILQLYDVWTDHQNMYLALEYVPGGELFDYVRKH--GAL 100
                  7899*********999999....788899*****3.....33467899********************************************9..9** PP

                  BHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE.TTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHH.HHHHHHHHHHH CS
  Pkinase_Tyr 101 tlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse.nkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsk.sDvWsfGvllw 196
                  + kd+ ++++q+ +++++ ++ ++ Hrdl   N+L++  ++v+ki+DfG+a       + +  ++   +++++apE+++++ ++ + +D+Ws Gv+ +
   EPX72961.1 101 SEKDVAHYMVQLLDALSHCHQFRFRHRDLKLENILINPyERVIKIADFGMATVE---PDNSFLTNFCGSLHYLAPEVVSHTPYQGApADIWSCGVIFY 195
                  *************************************7578**********976...4444456777899************986549********** PP

                  HHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 197 EiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfselve 257
                   +++  + p+ g ++  v++k+ +g   + p +c+++ ++l++k ++ +p++R t+ e+++
   EPX72961.1 196 ALLS-NKLPFGGTSTGVVYDKILNGA-YDLPCSCSTAAQDLLHKMLNVNPSNRITIPEILN 254
                  ****.9****************7764.567889**********************999875 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.1   1.9e-07   0.00085     181     257 ..      75     154 ..      22     165 .. 0.68

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 1.9e-07
  Haspin_kinase 181 eqqlflvlllkdkGtdLeevklkswkqalsifwqivkiLyvaE..tkfeFEHRdLhldniLvdknln.vtlidlklsRle 257
                    +q+++l l+   +G+  + v+ +     + + + +v+ L +     +f+F HRdL+l+niL++     + + d+ ++ +e
     EPX72961.1  75 HQNMYLALEYVPGGELFDYVRKHGALSEKDVAHYMVQLLDALShcHQFRFRHRDLKLENILINPYERvIKIADFGMATVE 154
                    444555555555666666665555555555666666666554311689***************87651568899888776 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0     0.045     2e+02      69     108 ..      77     122 ..      52     125 .. 0.77
   2 ?   10.9   0.0   7.2e-05      0.32     164     199 ..     120     154 ..      99     155 .. 0.81

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.045
                 EEEEEEE----EE-SS......HHHHHHHHHHHHHHHHHHCCHHCH CS
         APH  69 llfalieyvpgrsllr......klsaaqlpellealgeflaalhqv 108
                   ++++eyvpg  l +      +ls+++  ++  +l ++l + hq+
  EPX72961.1  77 NMYLALEYVPGGELFDyvrkhgALSEKDVAHYMVQLLDALSHCHQF 122
                 346899**********999888888888889999999999988888 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 7.2e-05
                 S-EEEE-SS-SGGGEEEC..TTEEEEE---TT-EEE CS
         APH 164 lptvllHgDlhpgNllvdpddgrvtGviDfedaglg 199
                  + ++ H+Dl++ N+l++p   rv+ + Df++a++ 
  EPX72961.1 120 HQFRFRHRDLKLENILINPY-ERVIKIADFGMATVE 154
                 468899************66.666799******975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (556 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       488  (0.0272185); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.45
# Mc/sec: 3706.18
//
Query:       EPX72962.1  [L=140]
Description: deoxyuridine 5'-triphosphate nucleotidohydrolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-46  157.4   0.0    1.5e-46  157.3   0.0    1.0  1  dUTPase   dUTPase


Domain annotation for each model (and alignments):
>> dUTPase  dUTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.3   0.0   8.4e-51   1.5e-46       2     129 .]      11     139 ..      10     139 .. 0.99

  Alignments for each domain:
  == domain 1  score: 157.3 bits;  conditional E-value: 8.4e-51
                 TCTBEBESSTT-SSEEEE-SSSEEEETTEEEEEEEEEEEE--TTEEEEEEE-HHHHHHHEEEEE.EEEETTBTSEEEEEEEE-SSS-EEE-TT-EEEEE CS
     dUTPase   2 eaeiptrkspesAgyDlsaakdltvkpgetvlvptdisiklpdglaalilpRSglaakglivvp.gvidsdyrGevkvvlfnltkkdvkikkgdRiAqL 99 
                 +a+ipt++s+ +AgyDl+a+ ++t++++++ lv td+si++p++++++i+pRSglaak++i+v+ gvid+dyrG+v v lfn++++d+ +k gdR+Aq+
  EPX72962.1  11 KATIPTKGSALAAGYDLYASAECTIPANGKALVDTDLSIAVPQDTYGRIAPRSGLAAKHFIDVGaGVIDADYRGHVRVLLFNHGNSDFPVKIGDRVAQI 109
                 789************************************************************************************************ PP

                 EEEEBECGEEEEESSTTTESSBTTXTTTTX CS
     dUTPase 100 ifariltaeleevetlkatergeggfgssg 129
                 i++ri+t+++ eve+l+at rg+ggfgs+g
  EPX72962.1 110 ILERIVTPPVLEVENLEATVRGSGGFGSTG 139
                 ***************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       200  (0.0111551); expected 358.6 (0.02)
Passed bias filter:                      186  (0.0103743); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.27s 00:00:00.67 Elapsed: 00:00:00.57
# Mc/sec: 740.75
//
Query:       EPX72963.1  [L=327]
Description: RNA 5'-triphosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.6e-58  196.0   0.2    9.5e-58  195.5   0.2    1.2  1  mRNA_triPase  mRNA capping enzyme, beta chain


Domain annotation for each model (and alignments):
>> mRNA_triPase  mRNA capping enzyme, beta chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  195.5   0.2   5.3e-62   9.5e-58       3     218 ..      80     286 ..      78     287 .. 0.95

  Alignments for each domain:
  == domain 1  score: 195.5 bits;  conditional E-value: 5.3e-62
                   HHHHHHHHHHHHHHHHCTCCGGCCEEEEEEEEEEEETTTSSB---SBSS-EEE-TT..CTEEEEE-B-HHHHHHHHHHHHHHHH..HTTCCCTTTEE CS
  mRNA_triPase   3 eitksvsdwiiaaldniksekrsqiEiEaklGlivdkstkeRlklpvsteaivenn..adskfesgvdedqfkelnnfLnelsrrneeenskrekvs 97 
                   + t++vs+++ ++   +++e  ++iEiEaklG++vd ++++R+++pv +e++++ +   +++f+s++ ++++k++n+fLn++ r  e++ + r ++ 
    EPX72963.1  80 DTTRTVSNFLLHY---LTNEPVENIEIEAKLGTLVDLDSQNRFEFPVLSETVLNPEfnLRTRFQSDMPASEHKHFNEFLNNAFR--ESQRPGRVPIV 171
                   6799*******99...66777789*******************************9999**********************996..9999******* PP

                   EEEEEEEEEEEE-S-SSS--EEEEEEETTT--EEEEEEEEEEEEEEEE-TTSSSEEEEEEEEEEE-SSSHHHCTTS--SEEEEEEEEEEEECCGTEE CS
  mRNA_triPase  98 lkeskevDkfYelkkkeekskirvskdsenqevlkkieKeriadlniylPnsklDyriSinlElpvseskaklskktpvseRlkeRlSyihkksgiq 194
                   +k+ k+vD fY+ k ++ ++++rv++d+++++vl+++ K+riadl +y+Pn+++D+riSi+ E+pvs   +  ++  p  +R k+R+ y+h++  ++
    EPX72963.1 172 YKHVKQVDLFYDSK-NHGHDRVRVTRDQKDNRVLACVMKRRIADLYLYCPNDAFDVRISISDEIPVS---MPPQDTPPLLTRIKDRVGYQHQD--VK 262
                   *************9.**************************************************99...6699999****************..** PP

                   EEEEEESSS---S--EEEEEEEEE CS
  mRNA_triPase 195 fDLtkvektektkkteekyElEiE 218
                   +DLt   ++  + ++++++ElE+E
    EPX72963.1 263 IDLTMTIQNDPRYESTKRHELEVE 286
                   ****99677899***********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       791  (0.0441185); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2447.39
//
Query:       EPX72964.1  [L=210]
Description: vacuolar sorting protein Did4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-30  106.3  20.8    1.3e-30  106.3  20.8    1.4  2  Snf7           Snf7
  ------ inclusion threshold ------
       0.17   10.5   7.7       0.13   10.9   6.6    1.2  1  Peptidase_S46  Peptidase S46
        0.3   11.4   6.5      0.057   13.7   2.0    2.2  2  Hpt            Hpt domain
        4.9    7.5  14.8         15    6.0   5.1    2.3  2  YlqD           YlqD protein


Domain annotation for each model (and alignments):
>> Snf7  Snf7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.3  20.8   2.8e-34   1.3e-30       3     170 ..      22     193 ..      20     198 .. 0.96
   2 ?   -0.8   0.0      0.22   9.9e+02     130     150 ..     187     208 ..     185     209 .. 0.77

  Alignments for each domain:
  == domain 1  score: 106.3 bits;  conditional E-value: 2.8e-34
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
        Snf7   3 irsLrkaerkldkkqeslekkikkleaelkklakkgnkdralllLKqkkryekqldqldnqlanleqvslaienlksnkevlnamkqgakamkamnkkv 101
                 +rsL +aer+ld+++ +l++++k l +e+k  ak gn  +a++ ++++ r+++ ++++ n + +l+++sl ++++ +  +++++m+++++ +  mn+ +
  EPX72964.1  22 QRSLGRAERELDREKVKLDQREKSLVQEIKSSAKAGNTGAARIQARDMMRLRNSRKKMTNAKTQLQAISLRLQTTRTSEQMMQSMRGATRLLGGMNRSM 120
                 789************************************************************************************************ PP

                 CCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTT-.GGTTHHHHHHHHHHHHHHHHHCSH....HHHHHHHTXXX CS
        Snf7 102 didkidklmdeiedqmekaeeisEalsrsldda.deedEeeleaeLdaLeqelgdeell...desvklpevPs 170
                 +++   ++ +++e++++++e+ +E++++s+dda ++ dEee ++ ++++++e+g + ++   d s ++ ++P+
  EPX72964.1 121 NLPAMSRIAQQFERENDMMEQRQEMIDESMDDAlEDDDEEEADELVNKVLDEIGVDLSQglpDASTQVGSMPE 193
                 *******************************************************997678877777777765 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.22
                 HHTT-.GGTTHHHHHHHHHHHH CS
        Snf7 130 sldda.deedEeeleaeLdaLe 150
                 +++++ +  +E+ l+a Ld+L+
  EPX72964.1 187 QVGSMpELKSEDNLQARLDDLA 208
                 6667766678999******996 PP

>> Peptidase_S46  Peptidase S46
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   6.6   2.9e-05      0.13     334     475 ..      65     208 ..      41     210 .] 0.75

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 2.9e-05
                    HHHHHHHHCT-H.HHHTTHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSHHHHHHHHHHHHHHHHH....HH-HHHHHHHHHHHHHHCHHHHCS--H CS
  Peptidase_S46 334 alrawlkkdpekkekygkalselealvkekrklaersalleeaessgsellslarklvrlaeerekpdaereeeyqeralealekeleridkdlda 429
                    + r++++ +++ ++k+ +a ++l+a+  + ++++++++++++++  +  l  + r+++  a  r  ++ ere++++e++ e++ +++++  +d d+
     EPX72964.1  65 QARDMMRLRNS-RKKMTNAKTQLQAISLRLQTTRTSEQMMQSMRGATRLLGGMNRSMNLPAMSRIAQQFERENDMMEQRQEMIDESMDDALEDDDE 159
                    55566666665.58999**************************999988888889999999999999********************999977777 PP

                    HHHHHHHHHHHHHHHHHS-G...GG--S----SS......-S-SHHCCC CS
  Peptidase_S46 430 evdkavlaallkeyreklka...erlpavdkvlgkeskgdlealvdrlv 475
                    e   +++++ l+e+   l++   +   +v ++ + +s+++l+a +d+l 
     EPX72964.1 160 EEADELVNKVLDEIGVDLSQglpDASTQVGSMPELKSEDNLQARLDDLA 208
                    7777777777777755544311134445555555666777777777765 PP

>> Hpt  Hpt domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1      0.73   3.3e+03      15      24 ..      26      35 ..      15      66 .. 0.55
   2 ?   13.7   2.0   1.3e-05     0.057      10      80 ..      82     155 ..      72     174 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.73
                HHHHHHHSCC CS
         Hpt 15 eqleqaldqe 24
                +++e+ ld+e
  EPX72964.1 26 GRAERELDRE 35
                3334444333 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 1.3e-05
                 HHHHHHHHHHHH....SCCHHHHHHHHHHH.HHHHHHHTTBHHHHHHHHHHHHHHHHCTSCHHHHHHHH.HHHHHHH CS
         Hpt  10 aeelleqleqal....dqedlqelaraaHt.LKGsagmlGltelaelahelEdlldragelelepelle.alkalle 80 
                 a ++l+++   l    ++e++ + +r a + L G+ +++ l++++++a+++E    ++  +e ++e+++  ++++le
  EPX72964.1  82 AKTQLQAISLRLqttrTSEQMMQSMRGATRlLGGMNRSMNLPAMSRIAQQFER---ENDMMEQRQEMIDeSMDDALE 155
                 456666666666888755555555555555167888*****************...777777777777765555554 PP

>> YlqD  YlqD protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   5.1    0.0033        15      22      89 ..      22      89 ..      15      94 .. 0.66
   2 ?    5.2   6.9    0.0059        26      31      86 ..      81     153 ..      76     181 .. 0.65

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0033
        YlqD 22 qqqlqaqieqldkelqqLefqakrlikeikkqsaq...qieeiqeqvekekserlekkkqllqqleqvqkL 89
                q++l ++ ++ld+e  +L++ +k l++eik+  ++       +    ++ + ++++ +k++++  +q+q +
  EPX72964.1 22 QRSLGRAERELDREKVKLDQREKSLVQEIKSSAKAgntG---AARIQARDMMRLRNSRKKMTNAKTQLQAI 89
                67788889999******************9866665332...33333334444444555555555555544 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0059
        YlqD  31 qldkelqqLefqakrlik.eikkqsaq................qieeiqeqvekekserlekkkqllqqleqv 86 
                 +++++lq +++ ++ + + e+  qs++                ++++i +q+e+e + ++++++ +++ +++ 
  EPX72964.1  81 NAKTQLQAISLRLQTTRTsEQMMQSMRgatrllggmnrsmnlpAMSRIAQQFERENDMMEQRQEMIDESMDDA 153
                 4444444433333333220222333335666666666666678***********************9999864 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2334  (0.13018); expected 358.6 (0.02)
Passed bias filter:                      725  (0.0404373); expected 358.6 (0.02)
Passed Vit filter:                        69  (0.00384851); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.44
# Mc/sec: 1439.53
//
Query:       EPX72965.1  [L=281]
Description: ribosomal protein subunit L40 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.3e-05   22.8   0.1    0.00013   21.8   0.1    1.5  1  KOW       KOW motif


Domain annotation for each model (and alignments):
>> KOW  KOW motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.1   7.1e-09   0.00013       1      31 [.      69      99 ..      69     100 .. 0.89

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 7.1e-09
                TTSEEEESSSTTTTCEEEEEEEETTTTEEEE CS
         KOW  1 pGdhVkVvsGphkGktGkVvkvdqhkvrVfv 31
                +Gd+V V sGp+kGk G+V++ ++ ++ +++
  EPX72965.1 69 KGDYVHVHSGPNKGKWGRVLETNKYTNGITI 99
                7********************9998777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (281 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       416  (0.0232026); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1998.97
//
Query:       EPX72966.1  [L=246]
Description: SBDS family ribosome maturation protein Sdo1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-34  116.5   2.6    4.4e-34  116.4   1.3    1.6  2  SBDS      Shwachman-Bodian-Diamond syndrome (SBDS) protein
    3.9e-33  113.9   0.2    6.6e-33  113.2   0.1    1.4  2  SBDS_C    SBDS protein C-terminal domain


Domain annotation for each model (and alignments):
>> SBDS  Shwachman-Bodian-Diamond syndrome (SBDS) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.4   1.3     5e-38   4.4e-34       1      87 [.      15     101 ..      15     102 .. 0.99
   2 ?   -2.8   0.0      0.76   6.8e+03      66      80 ..     153     167 ..     143     172 .. 0.69

  Alignments for each domain:
  == domain 1  score: 116.4 bits;  conditional E-value: 5e-38
                 T-EEEEEEETTEEEEEEE-HHHHHHHHCTT---HHHHBSSSS-EEETTTTEE--HHHHHHHHS---HHHHHHHHHHHSEEE--HHHH CS
        SBDS   1 nvsivrykkgkkrFeiavyknklleyregkeidLsevlqsekiFtnaskGetaskselekafgteskdeiikeILkkGeiqvsaeer 87 
                 nvs+v+ykkg+krFeia+yknk+ e+r++ e+dL+evlq+ ++F+n+skG++ask++l++afgt+++d ii eIL+kG+ qv ++er
  EPX72966.1  15 NVSVVKYKKGGKRFEIACYKNKVTEWRNKIETDLDEVLQIRSVFSNVSKGHVASKNDLKTAFGTDDVDAIILEILQKGDFQVGEKER 101
                 89***********************************************************************************98 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.76
                 -HHHHHHHHHHHSEE CS
        SBDS  66 skdeiikeILkkGei 80 
                 +  e+i++  +kGei
  EPX72966.1 153 QALEAIRKLQEKGEI 167
                 445677777778876 PP

>> SBDS_C  SBDS protein C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0      0.96   8.6e+03      70      89 ..      30      46 ..      25      69 .. 0.64
   2 !  113.2   0.1   7.3e-37   6.6e-33       2     115 ..     109     226 ..     108     227 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 0.96
                EEE-...CCCHHHHHHHHHH CS
      SBDS_C 70 itcptsikdkilklieqves 89
                i c    k+k++++ +++e+
  EPX72966.1 30 IACY---KNKVTEWRNKIET 46
                5555...6666666666654 PP

  == domain 2  score: 113.2 bits;  conditional E-value: 7.3e-37
                 HHHHHHHHHHHEEBTTTTB---HHHHHHHHHHTT----TTS-CCCCHHHHHHHHT..TTS--EE-EEEEEEEE-.......CCCHHHHHHHHHH..... CS
      SBDS_C   2 ekeiieivaeklvnpqtkrpytttmIekalkelgtsvktnksaksQalevikaLi..qeipiqrarmrlritcptsi....kdkilklieqvesqkvae 94 
                 +++i++ v+ ++v+p+t+rpy+ ++Ieka+ ++g+sv  +ksaksQale+i++L+   eipi rarmr+ri ++ ++    ++ki +l  +ve++ +++
  EPX72966.1 109 FRDIVSHVTLMCVDPNTRRPYPASIIEKAISDCGFSV-SSKSAKSQALEAIRKLQekGEIPIVRARMRIRIVIDIKQgkplREKIRSLADEVEEE-NMD 205
                 79***********************************.89**************9888999*************77799*9***********995.577 PP

                 S.EEEEEEEEGGGHHHHHHHH CS
      SBDS_C  95 kewevvvliePgaykeleefv 115
                 +e+e+v+l+ Pg yk+l+ef+
  EPX72966.1 206 DEYECVALVLPGNYKTLDEFI 226
                 9*******************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       886  (0.0494171); expected 358.6 (0.02)
Passed bias filter:                      644  (0.0359195); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1760.35
//
Query:       EPX72967.1  [L=306]
Description: brix domain-containing protein Rpf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.8e-22   79.0   0.0    4.8e-22   79.0   0.0    1.4  2  Brix             Brix domain
  ------ inclusion threshold ------
      0.021   14.5   0.1      0.031   13.9   0.1    1.4  1  Methyltransf_28  Putative S-adenosyl-L-methionine-dependent m
          1    8.3   9.2        1.5    7.8   9.2    1.1  1  THRAP3_BCLAF1    THRAP3/BCLAF1 family


Domain annotation for each model (and alignments):
>> Brix  Brix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.4       1.7     1e+04     164     164 ..      30      30 ..       9      52 .. 0.41
   2 !   79.0   0.0   8.1e-26   4.8e-22       2     192 ..     102     275 ..     101     276 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 1.7
                 S CS
        Brix 164 g 164
                 +
  EPX72967.1  30 K 30 
                 1 PP

  == domain 2  score: 79.0 bits;  conditional E-value: 8.1e-26
                 TT--HHHHHHHHHHHHHCTTSEEEEEE.ECT-TTTHHHHHHH...-HHHHHHHH..HCTCSEEEEEE..SSTTEEEEEEEEECECTGGGSTTTSTS-TT CS
        Brix   2 rktssrlrqllkdlrslmkphtasflk.rnsnklkdlvelag...vthlellse..kndcslfvfelskkrPngptlefkvenyslmkdlkkakktefg 94 
                 +++s ++ +++++l + +++  a f+k  ++ ++ ++ e a    +t+l++l+e  k+ + l +++l    P+gp+++f ++++ +++++ ++ + ++g
  EPX72967.1 102 KRASRKCYDFASELLDCFPN--AEFRKrTGNIEIHEIAEAATkrgYTDLIVLNEdrKQTNALTLIHL----PSGPSFYFTLSSIQSAQEISNH-GRSSG 193
                 56788899**********55..77777345567777766666889**********87777*******....*******************999.9999* PP

                 ---EEEEES.HHH.....HHHHHHHHHHH..SEEEG..-B-GG-SEEEEEEES.CCTTTECEEEE.E.EEEEEE..STTTTECT..T..EEEEEEESEE CS
        Brix  95 srPllvfngkenf.....kllksllqdlFrvpkislkspklsglrrvvlftaaenqetdktisfR.h.YaiklkksgkklpnlekekkerveLeEiGPr 186
                 + P l++n   nf      ++ + +q+lF       ++p++ ++r+vv+++++     d +++fR h Y ++   ++++ p     +   + L+E+GPr
  EPX72967.1 194 HIPELIIN---NFstrlgLTVARAFQSLF------IQQPQI-QGRQVVTIHCQR----D-FLFFRrHrYDFR---ERSNRP-----DGIGTGLQELGPR 269
                 ********...999888889999999999......466888.*********655....6.889985579995...455556.....456899******* PP

                 EEEEEE CS
        Brix 187 fdLklr 192
                 f+++lr
  EPX72967.1 270 FTMRLR 275
                 ****97 PP

>> Methyltransf_28  Putative S-adenosyl-L-methionine-dependent methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.1   5.2e-06     0.031      80     154 ..      81     181 ..      16     217 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 5.2e-06
  Methyltransf_28  80 estvkslgvkveWleelkeip..........eetgfilanEffDaLPihqfertedg..wrellveltpe.....................kka 140
                      ++ +++++++ ++       p          +++++ +a E++D++P   f+++ ++  ++e+    t+                      +  
       EPX72967.1  81 DEFAAYFNEERRF-------PkllvttskraSRKCYDFASELLDCFPNAEFRKRTGNieIHEIAEAATKRgytdlivlnedrkqtnaltliHLP 167
                      4444444444444.......3333333445579*******************777776678887777766777777776654444444443333 PP

  Methyltransf_28 141 kekefrltlspset 154
                      + ++f +tls  ++
       EPX72967.1 168 SGPSFYFTLSSIQS 181
                      33366666654444 PP

>> THRAP3_BCLAF1  THRAP3/BCLAF1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   9.2   0.00025       1.5     378     477 ..      10     104 ..       5     107 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.00025
  THRAP3_BCLAF1 378 eedvylerikkkkeersakevklrkeselssp.sneneesreklavkesslprsktvlsekresevkvrmdsldedlkrpssslakeRqlsrdLvh 472
                    ++  yl+ ++ +k+e+ +k ++ +ke+e ++p +++++  ++ +++ es+ +  +tvl++++++ev+ ++    +d++  ++ +++eR++++ Lv 
     EPX72967.1  10 RQQLYLKELQRRKKEKLEKRKDRAKEEE-KEPeKKAARLAENVPETIESKRVYDQTVLQDEPDEEVQAEI----QDDEF-AAYFNEERRFPKLLVT 99 
                    5667888889999999999999999999.56645555555666667777778999999***********9....44443.4689************ PP

  THRAP3_BCLAF1 473 sskKe 477
                     sk+ 
     EPX72967.1 100 TSKRA 104
                    ***86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (306 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1781  (0.0993363); expected 358.6 (0.02)
Passed bias filter:                      805  (0.0448993); expected 358.6 (0.02)
Passed Vit filter:                        77  (0.00429472); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.80u 0.39s 00:00:01.19 Elapsed: 00:00:00.62
# Mc/sec: 1497.27
//
Query:       EPX72968.1  [L=125]
Description: ribosomal protein subunit L28 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.2e-19   68.9   1.2    6.5e-19   68.6   1.2    1.0  1  MRP-L28       Mitochondrial ribosomal protein L28
  ------ inclusion threshold ------
      0.045   13.7   0.0      0.058   13.4   0.0    1.2  1  GhoS          Endoribonuclease GhoS
       0.33   11.0   1.9       0.31   11.1   0.5    1.6  2  Adhesin_P1_N  Adhesin P1 N-terminal domain


Domain annotation for each model (and alignments):
>> MRP-L28  Mitochondrial ribosomal protein L28
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.6   1.2   1.1e-22   6.5e-19      32     143 ..       8     121 ..       2     124 .. 0.85

  Alignments for each domain:
  == domain 1  score: 68.6 bits;  conditional E-value: 1.1e-22
                 XXXXXXXXXXXXXXXS.XSXXTTSSTTX..XSXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTTCTTCS-XXTT CS
     MRP-L28  32 irkleksakelkPvee.livplksvdsakrrqrkllelskeelerrallekqwaryrqqekekdeqlirqqleaqeealeeLkkvseeLYeaAvkrdeg 129
                 + k +k++k+  P  +   v+l      +   ++ l + ke  +++++++++w  ++  ++++ ++l+++q++a++ea+eeL++ se+L++aA+   ++
  EPX72968.1   8 LAKATKASKKTGPGVRdESVQLLRSTLYETPYKTTLHMDKESWKKHEIINRAWGIHQSRKQKEIKNLYDKQFQAMQEACEELRLTSENLFNAAMTGSKS 106
                 4588888888888654044444444444455667778899*******************************************************9999 PP

                 .STTXXXXXXBSSXX CS
     MRP-L28 130 .llPlelkgptetPP 143
                  ++P++ ++ptetPP
  EPX72968.1 107 rRFPIQTRIPTETPP 121
                 9************** PP

>> GhoS  Endoribonuclease GhoS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   9.7e-06     0.058      22      82 ..      26      88 ..      21      99 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 9.7e-06
                HHHHHHHHHHHTTEESEEE.-SS.S-EEE-TTSEEEE---S-HHHHHHHHHHGGGTSS----E CS
        GhoS 22 einelnsvltragFsltla.Dee.GkpheLgtntfglisalseeeieelaaglaesalgkkpe 82
                 ++ l+s+l+++ +++tl  D+e  k he+ + ++g+  + +++ei++l  +  ++  +   e
  EPX72968.1 26 SVQLLRSTLYETPYKTTLHmDKEsWKKHEIINRAWGIHQSRKQKEIKNLYDKQFQAMQEACEE 88
                56789***********98535551589**********************99988776665555 PP

>> Adhesin_P1_N  Adhesin P1 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.2     7e+03       7      16 ..      10      19 ..       7      27 .. 0.61
   2 ?   11.1   0.5   5.1e-05      0.31      38      60 ..      66      88 ..      63      91 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.2
  Adhesin_P1_N  7 qAvkeAkeaG 16
                  +A k+ k+ G
    EPX72968.1 10 KATKASKKTG 19
                  5666666666 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 5.1e-05
  Adhesin_P1_N 38 aKkaeIkaDYnkQakeikaatde 60
                   K++eIk+ Y+kQ + +++a +e
    EPX72968.1 66 RKQKEIKNLYDKQFQAMQEACEE 88
                  69****************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1227  (0.0684366); expected 358.6 (0.02)
Passed bias filter:                      667  (0.0372023); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.29s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 884.44
//
Query:       EPX72969.1  [L=172]
Description: 30S ribosomal protein S12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.3e-34  116.2   1.7    7.2e-34  115.8   1.7    1.2  1  Ribosom_S12_S23  Ribosomal protein S12/S23


Domain annotation for each model (and alignments):
>> Ribosom_S12_S23  Ribosomal protein S12/S23
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.8   1.7     4e-38   7.2e-34       4     114 .]      62     170 ..      55     170 .. 0.94

  Alignments for each domain:
  == domain 1  score: 115.8 bits;  conditional E-value: 4e-38
                      -----S-TSSTTSSEEEEEEEEEEEE---TT--S-EEEEEEEET.TSEEEEEEE-SSS..----TT-EEEEEE--.....BTTSTTEEEEBET. CS
  Ribosom_S12_S23   4 lrkktksdalegapqkrGvvlekvtveakkPnsAlRkvvrvrLikngkevtafipgegalnfldEhdevlvrGirrkgkavkDlpGvrykvvk. 96 
                        k+++s +leg p++rGv++++ tv++kkPnsA+Rkv+rvrL+ +g+ vta+ipg g  ++ +Eh +vlvrG+r      +D pGv+y++++ 
       EPX72969.1  62 NAKQQQSLSLEGGPFRRGVCTRVFTVKPKKPNSAVRKVARVRLS-SGRFVTAYIPGIG--HNAQEHAVVLVRGGR-----AQDCPGVQYHIIRg 147
                      567788999***********************************.*************..***************.....9************* PP

                      ...S---T..SSSTTTTT----T CS
  Ribosom_S12_S23  97 ...vagvs..lkalskykkekpk 114
                         +agv     ++sky+ +kpk
       EPX72969.1 148 vydIAGVVgrVSSRSKYGVKKPK 170
                      9998888777899********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       663  (0.0369792); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1276.12
//
Query:       EPX72970.1  [L=451]
Description: hexokinase 2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.4e-66  223.6   0.0    3.1e-66  223.2   0.0    1.1  1  Hexokinase_2  Hexokinase
    3.8e-61  206.5   0.0    5.1e-61  206.0   0.0    1.2  1  Hexokinase_1  Hexokinase
  ------ inclusion threshold ------
      0.082   12.7   0.1       0.15   11.9   0.1    1.3  1  Asp-Al_Ex     Predicted Permease Membrane Region


Domain annotation for each model (and alignments):
>> Hexokinase_2  Hexokinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  223.2   0.0   5.2e-70   3.1e-66       2     239 ..     216     445 ..     215     446 .. 0.92

  Alignments for each domain:
  == domain 1  score: 223.2 bits;  conditional E-value: 5.2e-70
                   EEEEESSSEEEEEEEEGGG-GGGTTTS-TTSEEEEE--GGGTTTT-SS-..--HHHHHHHHHSSSTTS-HHHHCCSHHHHHHHHHHHHHHHHC.TSS CS
  Hexokinase_2   2 iGlIlGtGtNacyleklsnieklegkkeksgemviNtEwgafgdegklpllrtkyDkeldeespnpgeqlfEkmiSGmYLGelvrlvlldlieekll 98 
                   +G+I+GtG+N++y+e++++i+kl++   ++++m+iN+Ewga +    ++l+ t+yD  ld+++pnpg+q+fEk +SGmYLGel+r++l +li+    
    EPX72970.1 216 MGVIFGTGSNGAYVENAAEIPKLTNAG-NKEKMLINIEWGASNF---KSLPATRYDLLLDHDTPNPGRQMFEKRVSGMYLGELFRRALFHLIKV-YN 307
                   9**********************8886.9************965...5567*****************************************84.44 PP

                   SC......CCCSTTSS-THHHHHHHC--BTT-HHHHHHHHHCCS---.-HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH-.....SSEEEEEESH CS
  Hexokinase_2  99 fkgk.se.klktpysldteflseieedesedleevrevleellglesvteedleivrevceavsrRaarlvAagiaallkklgkeekekvtvgvdGs 193
                   f+++  + ++ +++sl+t++ls+i  +   + e+v+evl+   g++  +++++ ++++ + +++rR+ar++A+ ia+l   +g  +++k ++gvdGs
    EPX72970.1 308 FNNGiIPpSVTDSWSLETSVLSRIVIN--RSAENVKEVLRPY-GIRFRDDNEALLIYDAAYCIGRRSARISAVPIASLYLSTGH-AGKKADIGVDGS 400
                   54443335*****************65..7789999999987.88777899******************************999.78999******* PP

                   HHHHSTTHHHHHHHHHHHHHT--S.-SEEEEE---TTTHHHHHHHH CS
  Hexokinase_2 194 lyekypkfrerlqealrellgeepekkvklklaedGsgvGAAliaa 239
                   l+e+yp+f ++l++al++llge+ ek++++++a+dGsg+GAAl+a+
    EPX72970.1 401 LVEHYPNFVNMLRDALKDLLGED-EKNITIGIAKDGSGIGAALCAL 445
                   ********************976.79******************97 PP

>> Hexokinase_1  Hexokinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  206.0   0.0   8.6e-65   5.1e-61       2     199 .]       9     207 ..       8     207 .. 0.97

  Alignments for each domain:
  == domain 1  score: 206.0 bits;  conditional E-value: 8.6e-65
                   HHHHHHHH---HHHHHHHHHHHHHHHHHHHS.S.STS--EE----S---S--EEEEEEEEESSSEEEEEEEEEESSS-EEEEEEEEE--GGGGGS.B CS
  Hexokinase_1   2 leeilkqfelsdeklkelvdrfleemekgLakekeslkmlptyvtrlPtGkekGtylAlDlGgtnlRvllveLlgeskveitqekykipeelktg.t 97 
                   +++++++fe +++ lk+ +++f e  +kgL+k++e l m p y++++PtG+ekG++lAlDlGgtnlRv++v+Llge+k++++q+k+ +p+e+ ++ +
    EPX72970.1   9 VKKLISDFECPTDALKNAMEDFDELRKKGLEKDDEMLAMAPAYISSVPTGEEKGDFLALDLGGTNLRVCWVRLLGEGKYDMKQSKSTLPREIVRNeS 105
                   78999*****************9999*****99777******************************************************9887769 PP

                   HHHHHHHHHHHHHHHHHHH....ST..T-S-EEEEEEE-SSEE-SBTT--EE-S--TT---TT-TTSBHHHHHHHHHHHTT-SEEEEEEE-HHHHHH CS
  Hexokinase_1  98 aeeLFdfiakciaefleeegeekkeekeeeelplGftFSFPveqtsldegtlirwtKgfaikdvegkdvvqllqealerkglpvkvvalvNDTvgtl 194
                   a+ L dfi ++i+ f++e+  ek   +eee lp+GftFS+P++q s+ + tlirwtKgf+i++++g d ++ l+++++ ++lpv + a++NDTvgtl
    EPX72970.1 106 AQPLVDFICDHIELFITENFPEKIGVSEEEYLPMGFTFSYPMSQRSIVDTTLIRWTKGFNIPEAIGLDFGSTLTQGMKDRKLPVVIEAVINDTVGTL 202
                   999*******************9999988******************************************************************** PP

                   HHHHH CS
  Hexokinase_1 195 lslaY 199
                   +++aY
    EPX72970.1 203 VTRAY 207
                   ****9 PP

>> Asp-Al_Ex  Predicted Permease Membrane Region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   2.5e-05      0.15      66     139 ..     169     237 ..     168     245 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 2.5e-05
   Asp-Al_Ex  66 avGlsaGpgffsslkkdGlklvllallvtvvplllalvlaklvlkldlallaGllaGalTstpalgaandalae 139
                 a+Gl+ G+ + +++k++ l +v+ a++  +v++l++ + +       + +++G++ G+ ++ + ++ a ++ ++
  EPX72970.1 169 AIGLDFGSTLTQGMKDRKLPVVIEAVINDTVGTLVTRAYTS----NAYNTIMGVIFGTGSNGAYVENAAEI-PK 237
                 79************************999999887766665....788999******99999999888887.55 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (451 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       406  (0.0226449); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 3069.95
//
Query:       EPX72971.1  [L=105]
Description: hypothetical protein SOCG_05738 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.017   13.9   0.5       0.02   13.7   0.5    1.1  1  DUF2207         Predicted membrane protein (DUF2207)
      0.046   13.7   0.1      0.053   13.5   0.1    1.2  1  Halogen_Hydrol  5-bromo-4-chloroindolyl phosphate hydrolysis 


Domain annotation for each model (and alignments):
>> DUF2207  Predicted membrane protein (DUF2207)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.5   2.3e-06      0.02     385     448 ..       7      69 ..       2      74 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 2.3e-06
     DUF2207 385 alglgliilglilillallllvlllvfllilllillliaiivlllfsrllgrrteeGaellakw 448
                 ++ ++++ ++++++++  +l  + +v ++++++ + l ++++ ++f+++ ++ t++ ++ ++k+
  EPX72971.1   7 TFRFLFFSFSFVFVFFCSFLSSP-FVSFALFTFHFSLSNSFYSFFFYKTKPKQTKKTYQKKEKI 69 
                 55666666777777777777777.9*********************************999987 PP

>> Halogen_Hydrol  5-bromo-4-chloroindolyl phosphate hydrolysis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.1   5.9e-06     0.053       2      55 ..       8      66 ..       7      99 .. 0.65

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 5.9e-06
  Halogen_Hydrol  2 lgwllsiliavivalvsffllgfsfflalliailggilvyvasr........knkkkkhlkk 55
                    +++l+++ + v+v+++sf+++ f +f+    + +++ l+ ++++        k++kk++ kk
      EPX72971.1  8 FRFLFFSFSFVFVFFCSFLSSPFVSFAL---FTFHFSLSNSFYSfffyktkpKQTKKTYQKK 66
                    7899999999999999999865555555...4444444444444444446655555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1414  (0.0788666); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 755.62
//
Query:       EPX72972.1  [L=174]
Description: SM22/transgelin-like actin modulating protein Stg1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-20   73.1   0.1    2.6e-20   72.6   0.1    1.2  1  CH          Calponin homology (CH) domain
      0.007   16.2   0.1      0.014   15.3   0.1    1.5  1  CAMSAP_CH   CAMSAP CH domain
  ------ inclusion threshold ------
      0.019   15.2   0.0      0.028   14.7   0.0    1.3  1  RIG-I_C-RD  C-terminal domain of RIG-I


Domain annotation for each model (and alignments):
>> CH  Calponin homology (CH) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.6   0.1   4.4e-24   2.6e-20       2     108 ..       4     109 ..       3     110 .. 0.93

  Alignments for each domain:
  == domain 1  score: 72.6 bits;  conditional E-value: 4.4e-24
                 HHHHHHHHHHHHHHTTSTTSSTTSCHHHHHTTSHHHHHHHHHHSTTTSSGGGSTTTHHHHHHHHHHHHHHHHHHTTCHTTSS.-HHHHHTTSHH.HHHH CS
          CH   2 eqkkellrWinshleeagpkvkvedfeedlrDGvlLckLlnklapglvdkkklnksefkkleNinlaldvaekklgvpkvli.eaedlvegknk.svlt 98 
                 e ++e+++Wi+++l+   + +  e++ e lr+GvlLc++ +++  g +++k+ n+ +f ++eNi++++++a++ +gvp  ++ +++dl+e++n  +vl+
  EPX72972.1   4 ELEQEARAWIEQTLNITLNAK--EELLEELRSGVLLCQICKQVLGGNIRYKESNM-PFVQMENISTFINFAQQVVGVPSQDMfQTADLFERRNDeQVLR 99 
                 6799**********8876666..9*****************************87.**********************************77777**** PP

                 HHHHHHHHHH CS
          CH  99 llaqLfrafq 108
                  +++++r++ 
  EPX72972.1 100 AIHSFSRYAA 109
                 ******9975 PP

>> CAMSAP_CH  CAMSAP CH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.1   2.3e-06     0.014      10      82 ..      21      89 ..      12      92 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 2.3e-06
   CAMSAP_CH 10 ippvedllrdlsdGvaLaalihfYcPqliklediclkesmsladslyNiqllqefcerkLgnsvfhl.tleDll 82
                +   e+ll++l++Gv+L+++ +      i+      kes   +  ++Ni+++ +f+++  g+ +  + ++ Dl+
  EPX72972.1 21 LNAKEELLEELRSGVLLCQICKQVLGGNIRY-----KESNMPFVQMENISTFINFAQQVVGVPSQDMfQTADLF 89
                566799**************98777777766.....677788999************99887666555666665 PP

>> RIG-I_C-RD  C-terminal domain of RIG-I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   4.7e-06     0.028      52      87 ..      30      65 ..       8      75 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 4.7e-06
  RIG-I_C-RD 52 fekkgkikCkkCkkdwGimmkykgvelpvLkiksfv 87
                  ++g + C+ Ck+ +G  ++yk+ ++p +++++++
  EPX72972.1 30 ELRSGVLLCQICKQVLGGNIRYKESNMPFVQMENIS 65
                3357899************************99976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       541  (0.0301746); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.27s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 1230.31
//
Query:       EPX72973.1  [L=821]
Description: WDR24 family WD repeat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.8e-16   58.2  15.9    8.5e-08   32.8   0.1    7.1  7  WD40            WD domain, G-beta repeat
    4.9e-13   48.5  10.7    9.1e-13   47.6  10.7    1.5  1  Zn_ribbon_17    Zinc-ribbon, C4HC2 type
      0.001   19.3   0.2       0.27   11.5   0.0    4.0  4  ANAPC4_WD40     Anaphase-promoting complex subunit 4 WD40 dom
  ------ inclusion threshold ------
       0.13   12.6   9.1       0.27   11.6   9.1    1.6  1  zf-RING_2       Ring finger domain
          1    9.5   6.0       0.98    9.6   3.4    2.3  2  zinc_ribbon_16  Zinc-ribbon like family
        1.4    9.1   4.8        3.4    7.9   4.8    1.6  1  RINGv           RING-variant domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.92   2.8e+03      11      26 ..      41      56 ..      34      60 .. 0.74
   2 ?   -2.4   0.1       3.6   1.1e+04      14      38 .]      95     121 ..      82     121 .. 0.59
   3 !   11.6   0.3   0.00014      0.41       3      38 .]     127     164 ..     125     164 .. 0.81
   4 ?    4.8   0.0     0.019        57       6      38 .]     173     207 ..     169     207 .. 0.80
   5 !   32.8   0.1   2.8e-11   8.5e-08       4      38 .]     215     250 ..     212     250 .. 0.92
   6 ?    4.2   0.0      0.03        91      18      38 .]     273     300 ..     256     300 .. 0.68
   7 !    9.8   0.0   0.00049       1.5       5      34 ..     309     338 ..     305     340 .. 0.79

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.92
                SSEEEEEEETTSSEEE CS
        WD40 11 ssvtslafspdgawla 26
                +sv+sl++spd + +a
  EPX72973.1 41 GSVNSLSTSPDFTKFA 56
                56********976655 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 3.6
                 EEEE..EETTSSEEEEEETTSEEEEEE CS
        WD40  14 tsla..fspdgawlasGsdDgtvriWd 38 
                 ++++  +  + ++l+++s  g + +Wd
  EPX72973.1  95 NDVKwgNTFSENYLFTCSPLGDLNVWD 121
                 555455445556677887556666665 PP

  == domain 3  score: 11.6 bits;  conditional E-value: 0.00014
                 EEEEEESSSS.EEEEE.EETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGHss.vtsla.fspdgawlasGsdDgtvriWd 38 
                  + ++t Hs  ++s++    ++++++++s Dg  ++Wd
  EPX72973.1 127 IISKFTEHSRaIHSIDvSKFHSSYILTASQDGLTKLWD 164
                 577899**446****976666666889**********9 PP

  == domain 4  score: 4.8 bits;  conditional E-value: 0.019
                 EEESSSS.EEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40   6 tltGHss.vtslafspdgaw.lasGsdDgtvriWd 38 
                  ++G s   +++afsp+g   ++ + d+gtv  Wd
  EPX72973.1 173 NFRGNSEaARDVAFSPSGINeFVVAYDNGTVQKWD 207
                 57777333699*********9666999****9998 PP

  == domain 5  score: 32.8 bits;  conditional E-value: 2.8e-11
                 EEEEESSSSE.EEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGHssv.tslafspdgawlasGsdDgtvriWd 38 
                   +l++H++v  ++++ p+g++las+++D+++riWd
  EPX72973.1 215 SLKLSAHNGVaLCIDYTPNGSLLASCGRDKSIRIWD 250
                 56799**99999***********************9 PP

  == domain 6  score: 4.2 bits;  conditional E-value: 0.03
                 EETTSSE.....EEEEE..TTSEEEEEE CS
        WD40  18 fspdgaw.....lasGs..dDgtvriWd 38 
                 + p+ +      las+s   D t+ +Wd
  EPX72973.1 273 WEPSEDNnatrrLASSSllGDDTINLWD 300
                 55555555566788885333*******9 PP

  == domain 7  score: 9.8 bits;  conditional E-value: 0.00049
                 EEEESS.SSEEEEEEETTSSE.....EEEEETTSEE CS
        WD40   5 rtltGH.ssvtslafspdgaw.....lasGsdDgtv 34 
                 r+lt H ++vt+l      +w     l+s+s+Dg +
  EPX72973.1 309 RSLTHHeNNVTAL------QWispnvLLSSSRDGVL 338
                 789999999****......7766665568999*976 PP

>> Zn_ribbon_17  Zinc-ribbon, C4HC2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.6  10.7     3e-16   9.1e-13       4      54 ..     766     820 ..     763     821 .] 0.90

  Alignments for each domain:
  == domain 1  score: 47.6 bits;  conditional E-value: 3e-16
  Zn_ribbon_17   4 lksCayCelavkgrvvlcgvCeHvlHasCarewfendd...laeCps.GCGckcl 54 
                   l+ C++Cel+++g v+ c  C+H  H+sC+r+wf +d     + Cp+ GCG+ cl
    EPX72973.1 766 LERCCFCELPLNGIVTSCYGCGHLGHESCLRDWFFHDTaeeGQLCPVpGCGVTCL 820
                   679******************************87766566788**********7 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.83   2.5e+03      50      87 ..     105     141 ..      85     145 .. 0.74
   2 ?    0.8   0.0      0.21   6.3e+02      36      67 ..     176     208 ..     158     224 .. 0.78
   3 !   11.5   0.0   9.2e-05      0.27      40      90 ..     224     274 ..     210     276 .. 0.82
   4 ?    0.6   0.0      0.24   7.3e+02      58      90 ..     292     324 ..     281     330 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.83
  ANAPC4_WD40  50 gklLavaysdgevrlldaesgkvvhslsvksekavtcl 87 
                  ++ L      g +++ d+ s +++++++ +s  a+ ++
   EPX72973.1 105 ENYLFTCSPLGDLNVWDIDSSQIISKFTEHSR-AIHSI 141
                  5666666667889999999******9999988.46655 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.21
  ANAPC4_WD40  36 kedsevrsLaWkpdg.klLavaysdgevrllda 67 
                  ++++  r++a++p+g + ++vay++g+v+  d 
   EPX72973.1 176 GNSEAARDVAFSPSGiNEFVVAYDNGTVQKWDL 208
                  5677889999999996689********997765 PP

  == domain 3  score: 11.5 bits;  conditional E-value: 9.2e-05
  ANAPC4_WD40  40 evrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                     ++ + p+g+lLa    d ++r+ d+++ +    +++++   v+ + W+
   EPX72973.1 224 VALCIDYTPNGSLLASCGRDKSIRIWDINNNQRKAVSTINTIAPVNLVRWE 274
                  456899**********************99876666666666669999996 PP

  == domain 4  score: 0.6 bits;  conditional E-value: 0.24
  ANAPC4_WD40  58 sdgevrlldaesgkvvhslsvksekavtclgWg 90 
                   d +++l d+    v h + +++e++vt l+W 
   EPX72973.1 292 GDDTINLWDVPRPYVPHRSLTHHENNVTALQWI 324
                  678899999999999999999999999999996 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   9.1   9.2e-05      0.27       2      42 ..     768     812 ..     767     815 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 9.2e-05
   zf-RING_2   2 eCpICleelssadsvlll.pCgHvfhreClerwlrssst.....CPl 42 
                  C+ C  +l+    v+ +  CgH  h++Cl++w+ +        CP+
  EPX72973.1 768 RCCFCELPLN--GIVTSCyGCGHLGHESCLRDWFFHDTAeegqlCPV 812
                 5888866663..45554448*************63333356779996 PP

>> zinc_ribbon_16  Zinc-ribbon like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1       1.2   3.7e+03      46      58 ..     764     776 ..     751     782 .. 0.81
   2 ?    9.6   3.4   0.00033      0.98      89     122 ..     781     819 ..     772     821 .] 0.83

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 1.2
  zinc_ribbon_16  46 kplpkcavcglsl 58 
                      +l +c+ c l l
      EPX72973.1 764 SKLERCCFCELPL 776
                     5789999999877 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00033
  zinc_ribbon_16  89 sfclscghgahashakewf.....sthsicpvadcncec 122
                     + c  cgh  h s  ++wf     +  ++cpv+ c   c
      EPX72973.1 781 TSCYGCGHLGHESCLRDWFfhdtaEEGQLCPVPGCGVTC 819
                     57****************95544344579******9999 PP

>> RINGv  RING-variant domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   4.8    0.0011       3.4      15      45 ..     780     807 ..     768     812 .. 0.62

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0011
                 B-SS--STCCCSB-HHHHHHHHHHTCT-SB- CS
       RINGv  15 ispCkCrGslklvHesClekWldekeantqC 45 
                 ++   C G  +l HesCl  W+ +    ++ 
  EPX72973.1 780 VTS--CYGCGHLGHESCLRDWFFH-DTAEEG 807
                 444..66666899*********99.333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (821 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       721  (0.0402142); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.69u 0.29s 00:00:00.98 Elapsed: 00:00:00.48
# Mc/sec: 5172.80
//
Query:       EPX72974.1  [L=2359]
Description: U5 snRNP complex subunit Spp42 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   1.9e-233  774.5   7.8   3.2e-233  773.7   7.8    1.4  1  PROCN           PROCN (NUC071) domain
   2.2e-125  416.9   0.9   4.3e-125  415.9   0.9    1.5  1  PRP8_domainIV   PRP8 domain IV core
    2.8e-87  290.6   3.0      1e-86  288.8   3.0    2.1  1  U6-snRNA_bdg    U6-snRNA interacting domain of PrP8
    5.1e-79  263.5   1.7    1.1e-78  262.4   1.7    1.6  1  PRO8NT          PRO8NT (NUC069), PrP8 N-terminal domain
    2.4e-73  244.5   0.1    5.9e-73  243.3   0.1    1.7  1  U5_2-snRNA_bdg  U5-snRNA binding site 2 of PrP8
    1.9e-44  150.6   0.0    4.3e-44  149.4   0.0    1.7  1  PROCT           PROCT (NUC072) domain
    2.6e-44  149.5   0.1    8.7e-44  147.8   0.1    2.0  1  RRM_4           RNA recognition motif of the spliceosomal PrP
    2.2e-07   30.9   0.0      5e-07   29.7   0.0    1.6  1  JAB             JAB1/Mov34/MPN/PAD-1 ubiquitin protease


Domain annotation for each model (and alignments):
>> PROCN  PROCN (NUC071) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  773.7   7.8  1.4e-236  3.2e-233       2     407 .]     415     820 ..     414     820 .. 1.00

  Alignments for each domain:
  == domain 1  score: 773.7 bits;  conditional E-value: 1.4e-236
       PROCN   2 ektkdalsllfapaPfnlrsgktkraedvplikkwykeraekeePvkvrvsyqkllkkyvlnelkkkkkkkkkkkkllkelketkffqktkldwveaGl 100
                 e+t++al+l++ap+Pfn+rsg tkra+dvpl+k+wy e+++ ++Pvkvrvsyqkllk++v+n+l++ + k++++++l+++lk+tkffq+t++dwveaGl
  EPX72974.1 415 EHTANALTLWWAPYPFNKRSGITKRAQDVPLVKQWYLEHCPPNQPVKVRVSYQKLLKSHVMNKLHTPHPKSHTNRNLFRQLKNTKFFQSTTIDWVEAGL 513
                 5799*********************************************************************************************** PP

       PROCN 101 qvvrqgfnmlnllihrksltylhldynfnlkPtktlttkerkksrlGnafhlirellrlvkllvdahvqyrlgkidayqladglqyifnhvgqltGiyr 199
                 qv+rqg+nml+llihrk+ltylhldyn nlkPtktlttkerkksr+Gnafhl+re+lrl+kl+vd+hvqyrlg+idayqladgl+y+fnh+gqltG+yr
  EPX72974.1 514 QVCRQGYNMLQLLIHRKGLTYLHLDYNCNLKPTKTLTTKERKKSRFGNAFHLMREILRLTKLIVDSHVQYRLGNIDAYQLADGLHYTFNHIGQLTGMYR 612
                 *************************************************************************************************** PP

       PROCN 200 ykykvmrqirackdlkhviysrfntgevgkGPGvGfwaPswrvwvfflrGiiPllerwlgnllarqfeGrkskevaktitkqrveseydlelraavlhd 298
                 yky++mrqirackdlkh+iy+rfntg vgkGPG+GfwaPswrvw+fflrGi+PllerwlgnllarqfeGr++  vak+itkqrv+s+ dlelraav++d
  EPX72974.1 613 YKYRLMRQIRACKDLKHLIYYRFNTGPVGKGPGCGFWAPSWRVWLFFLRGIVPLLERWLGNLLARQFEGRHATGVAKQITKQRVDSHQDLELRAAVMND 711
                 *************************************************************************************************** PP

       PROCN 299 ildmlPegvkqskaktilqhlseafrcwkanipwkvPglpepienlilryvkakadewisvahynrerikrgatvdktvvkknlGrltrlylkeeqerq 397
                 ildm+Peg++q k+ktilqhlsea+rcwkanipwkvPglp+pien+ilryvk+kad+w+svah+nreri+rgatvdktv+kknlGrltrl+lk+eqerq
  EPX72974.1 712 ILDMIPEGIRQGKSKTILQHLSEAWRCWKANIPWKVPGLPAPIENMILRYVKSKADWWTSVAHFNRERIRRGATVDKTVAKKNLGRLTRLWLKAEQERQ 810
                 *************************************************************************************************** PP

       PROCN 398 aeylkdgpyi 407
                 ++ylkdgpy+
  EPX72974.1 811 HNYLKDGPYV 820
                 ********97 PP

>> PRP8_domainIV  PRP8 domain IV core
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  415.9   0.9  1.9e-128  4.3e-125       1     230 []    1780    2009 ..    1780    2009 .. 0.99

  Alignments for each domain:
  == domain 1  score: 415.9 bits;  conditional E-value: 1.9e-128
  PRP8_domainIV    1 eallnsqnyaelfsneiklfvddtnvyrvtvhktfeGnlttkpvnGavfilnPktGqlflkvihtsvwagqkrlsqlakwkaaeevaalvrslP 94  
                     e +l+s+nya+lfsn+i+lfvddtnvyrvt+hktfeGnlttkp+nGa+fi+nP+tGqlflkvihtsvwagqkrl+qlakwk+aeevaal+rslP
     EPX72974.1 1780 EQYLSSSNYADLFSNQIQLFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLP 1873
                     789******************************************************************************************* PP

  PRP8_domainIV   95 veeqPkqiivtrkglldplevhlldfPnivikgselkLPfkavlkiekladlvlkatepkmvlfnlyddWlesissytafsrlililralkink 188 
                     veeqPkqiivtrkg+ldplevhlldfPni+ikgsel+LPf+a++k+e+++dl+l+atep+mvlfnlyddWl+s+ssytafsrlililral++n 
     EPX72974.1 1874 VEEQPKQIIVTRKGMLDPLEVHLLDFPNITIKGSELQLPFQAIIKLERINDLILRATEPQMVLFNLYDDWLQSVSSYTAFSRLILILRALNVNL 1967
                     ********************************************************************************************** PP

  PRP8_domainIV  189 ekakkilkpdkevvvkehhlwptlsdeeWvevevklrdlila 230 
                     ek+k il+pdk+++++++h+wp+l+d++W +ve +lrdlila
     EPX72974.1 1968 EKTKLILRPDKSIITQANHIWPSLDDQQWLDVEPQLRDLILA 2009
                     ****************************************95 PP

>> U6-snRNA_bdg  U6-snRNA interacting domain of PrP8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  288.8   3.0   4.6e-90     1e-86       1     159 []    1462    1620 ..    1462    1620 .. 0.99

  Alignments for each domain:
  == domain 1  score: 288.8 bits;  conditional E-value: 4.6e-90
  U6-snRNA_bdg    1 fkkyqllksekfawtsarhdgkllnleryradviealGgveailehtlfkatsfksweglvwdkasgfeeslkakkltnaqrsGlsqiPnrrftl 95  
                    fk+yqllk+++f+wts+rhdgkl++l++yr dvi+alGgve+ileht+fkat+f+swegl+w+kasgfees+k kkltnaqrsGl+qiPnrrftl
    EPX72974.1 1462 FKQYQLLKNNPFWWTSQRHDGKLWQLNNYRVDVIQALGGVEGILEHTMFKATGFPSWEGLFWEKASGFEESMKFKKLTNAQRSGLNQIPNRRFTL 1556
                    89********************************************************************************************* PP

  U6-snRNA_bdg   96 WWsPtinranvyvGfqvqldltGvfmhgklptlkisliqifrahlWqkihesvvmdllqvldde 159 
                    WWsPtinranvyvGfqvqldltG++mhgk+ptlkisliqifr+hlWqkihesvv dl+qv+d+e
    EPX72974.1 1557 WWSPTINRANVYVGFQVQLDLTGIMMHGKIPTLKISLIQIFRSHLWQKIHESVVWDLCQVFDQE 1620
                    **************************************************************96 PP

>> PRO8NT  PRO8NT (NUC069), PrP8 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  262.4   1.7     5e-82   1.1e-78       1     152 []      75     225 ..      75     225 .. 0.99

  Alignments for each domain:
  == domain 1  score: 262.4 bits;  conditional E-value: 5e-82
                 -----HHHHHHHHHHHTTT-SGGGTTTHHHHHHHHTTSHHHHHHHHTT---TT-S--B--EEEETTT--EEE-----B-HHHHHHHHHHHHHHHHHHHH CS
      PRO8NT   1 keelPpehlRkiikdhgdlsskkfksdkrvylgalkylPhavlkllenmpmpweevrevkvlyhvtgaitfvneiprviepvylaqwstmwiamrrekr 99 
                 k++lPpehlRki+k++gd++skkf+ dkr+ylgalkylPhavlkllenmpmpwee+rev+vlyhvtgaitfvne prviep+y+aqw++mw++mrrekr
  EPX72974.1  75 KADLPPEHLRKIMKERGDMASKKFRADKRSYLGALKYLPHAVLKLLENMPMPWEEYREVRVLYHVTGAITFVNESPRVIEPHYIAQWGSMWVMMRREKR 173
                 789************************************************************************************************ PP

                 TTS------SS-S-SSS----H.HHHHHH-----------TTTSTTTTTTTT- CS
      PRO8NT 100 drrhfkrlrfppfddeeppldyadnildvepleaiqleldeeedeavvdwlyd 152
                 dr++fkrlrfppfddeepp++  d++ld+eple ++++ldeeed+ v+dw+yd
  EPX72974.1 174 DRKNFKRLRFPPFDDEEPPFSI-DQLLDLEPLEGVRMDLDEEEDAPVYDWFYD 225
                 ********************97.79***************************9 PP

>> U5_2-snRNA_bdg  U5-snRNA binding site 2 of PrP8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  243.3   0.1   2.6e-76   5.9e-73       1     134 []    1230    1363 ..    1230    1363 .. 0.99

  Alignments for each domain:
  == domain 1  score: 243.3 bits;  conditional E-value: 2.6e-76
  U5_2-snRNA_bdg    1 kegvwdlvnestkertakaflkvseeeiekfenrirqillssgsttftkiaakwntalialltyfreavvsteelldvlvkaetkiqtrvklg 93  
                      ++gvw+l+n+ tkerta+af++v++e+i+kf+nrirqil+ssgsttftkia+kwntalial+ty+rea++st elldvlvk+e+k+qtrvk++
      EPX72974.1 1230 RDGVWNLTNNLTKERTAQAFIRVTDEDIKKFSNRIRQILMSSGSTTFTKIANKWNTALIALMTYYREAAISTPELLDVLVKCESKVQTRVKIS 1322
                      589****************************************************************************************** PP

  U5_2-snRNA_bdg   94 lnskmpsrfPpavfytPkelGGlGmlsaghvliPasdlkys 134 
                      lnskmpsrfPpavfy+PkelGGlGmls+ghvliP+sdl++s
      EPX72974.1 1323 LNSKMPSRFPPAVFYSPKELGGLGMLSMGHVLIPQSDLRWS 1363
                      ****************************************8 PP

>> PROCT  PROCT (NUC072) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.4   0.0   1.9e-47   4.3e-44       1     122 [.    2235    2356 ..    2235    2357 .. 0.97

  Alignments for each domain:
  == domain 1  score: 149.4 bits;  conditional E-value: 1.9e-47
       PROCT    1 ivltvsftpgsvslsayklteeGyewgkknkdlasenpegfepsfsekvqllLsdrilGfflvPeegvWnysfmgakfsekmkyelkldiPkeFyde 97  
                  i ltvs+ pgs+sl+ay +t+eG++wg++n+d++s+++ gf+p++ +k+qllLsdri+Gffl+Pee+vWny+f+ga+fs++m+y +kld+P++F++ 
  EPX72974.1 2235 IALTVSYVPGSISLAAYGVTDEGINWGSNNMDMNSDEAVGFNPEMGQKCQLLLSDRIQGFFLTPEEDVWNYNFNGASFSSNMSYGMKLDVPLSFFAL 2331
                  689********************************************************************************************** PP

       PROCT   98 lHRpthFlqfaeleeeeeleadqed 122 
                   HRpth ++++e+e +++ e+d  d
  EPX72974.1 2332 EHRPTHVISYTEMEGNDQFEEDMPD 2356
                  *************888888888765 PP

>> RRM_4  RNA recognition motif of the spliceosomal PrP8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.8   0.1   3.9e-47   8.7e-44       1      91 [.    1005    1095 ..    1005    1096 .. 0.99

  Alignments for each domain:
  == domain 1  score: 147.8 bits;  conditional E-value: 3.9e-47
       RRM_4    1 ekidltllnrllrlivdknladyitaknnvvltykdmshvnsyGlirGlqfssfvvqyyglvldllllGleraselaGpaekpneflqfkd 91  
                  ek+dltllnrll+l++d+nla y +aknnvvl+ykdmsh+nsyGl+rGlqfssf++q+yglvldll+lGl+ra+e+aGp+e+pn+fl+fkd
  EPX72974.1 1005 EKVDLTLLNRLLSLLMDTNLASYASAKNNVVLSYKDMSHTNSYGLVRGLQFSSFIWQFYGLVLDLLILGLQRATEIAGPPESPNDFLHFKD 1095
                  89***************************************************************************************98 PP

>> JAB  JAB1/Mov34/MPN/PAD-1 ubiquitin protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   0.0   2.2e-10     5e-07      28     113 ..    2143    2224 ..    2107    2229 .. 0.82

  Alignments for each domain:
  == domain 1  score: 29.7 bits;  conditional E-value: 2.2e-10
                  S--EEEEEEEESSSE..EEEEEEEEEESEEEESSECEEEEEHHHHHHHHHHHHHHHCTTSEEEEEEEESSSS-SS--HHHHHHHHHHH CS
         JAB   28 eevmGlliGelnddt..tveitnvfalpfeetekdvdavsldqeylekksellkklrgrervvGWYhshpditvwlsevdvrtqalyq 113 
                   +v+G+l+G+  +d+  + ei+++ ++p+ ++ k+v+  s   e      ++   +  +++ +GW h+++    +ls+ dv+t+a++ 
  EPX72974.1 2143 TQVAGMLYGKSPSDNpqIKEIHCIAMVPQLGSLKNVQIPSKLPE------DMQLPILDDLEPLGWVHTQSSELPYLSSADVTTHAKLS 2224
                  479***********999******************999999888......4444443779************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2359 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       612  (0.0341346); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 1.14u 0.32s 00:00:01.46 Elapsed: 00:00:00.51
# Mc/sec: 13962.54
//
Query:       EPX72975.1  [L=1470]
Description: hypothetical protein SOCG_00733 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-47  161.4   3.2    1.3e-47  161.4   3.2    2.3  2  RasGAP_C  RasGAP C-terminus
    6.5e-28   97.9   0.3    2.1e-27   96.2   0.3    1.9  1  RasGAP    GTPase-activator protein for Ras-like GTPase
      5e-16   58.8   0.0    2.2e-15   56.7   0.0    2.2  1  CH        Calponin homology (CH) domain
    6.4e-16   56.6  13.6        0.4   10.6   0.0   11.4 11  IQ        IQ calmodulin-binding motif


Domain annotation for each model (and alignments):
>> RasGAP_C  RasGAP C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1      0.68     3e+03      62      88 ..     624     654 ..     592     684 .. 0.57
   2 !  161.4   3.2   2.9e-51   1.3e-47       1     135 [.    1255    1392 ..    1255    1394 .. 0.97

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.68
    RasGAP_C  62 LseknnylesqlesYkayienvleql....k 88 
                 L++  n++e qles ++ i    +++    +
  EPX72975.1 624 LRDDVNFIEIQLESCQDEILALQSTIrgclA 654
                 5566667777777766666555444433331 PP

  == domain 2  score: 161.4 bits;  conditional E-value: 2.9e-51
    RasGAP_C    1 lvelkkkalenlkeLeelgvisrennyqellneIakdirnkgrlrekrkeElesleetlktLseknnylesqlesYkayienvleqlkkkkgk...l 94  
                  ++elk  al n++eLe+lg  sr+nnyq+++n+Ia dirnk+++r +r++El+  ++ l +L++k+++l sql+sY++yie+++e+l++kkgk   +
  EPX72975.1 1255 FAELKYLALTNVLELENLGFASRSNNYQDIVNSIALDIRNKSKRRLQRQRELDFGRQSLLSLKDKRAFLDSQLKSYNEYIEQAMETLQSKKGKkklI 1351
                  5799***************************************************************************************7679** PP

    RasGAP_C   95 pfskqyfkkrelkksgklpkfgsykysakqLeekgVLleie 135 
                  pfskqyf++rel+ksgk+p fgs+ky+a +L+++g+L++++
  EPX72975.1 1352 PFSKQYFHMRELRKSGKVPRFGSFKYTATKLYDRGILVSMS 1392
                  **************************************997 PP

>> RasGAP  GTPase-activator protein for Ras-like GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.2   0.3   4.6e-31   2.1e-27       2     207 ..     858    1058 ..     857    1059 .. 0.94

  Alignments for each domain:
  == domain 1  score: 96.2 bits;  conditional E-value: 4.6e-31
      RasGAP    2 iseliklElessenpndllrsnsvvsklleeytkrpegqeyLkkilkpllqkil.ekedlnlelDPrkiyeelkkkkesktgkksessgkksekeas 97  
                  +++++++E++++e+ +dll+++s++  ll   +   +    L k +   ++kil  +e  ++e++P  + ++++ ++        + ++k+  ++a+
  EPX72975.1  858 MTNVLNMEVSQAETNEDLLNNESIWKVLLMGLLGN-IRDAKLWKSMLSRMHKILvYDERMDFEINPVALLKQFEPNRRDL-----SENPKVALNVAM 948 
                  78999******************************.7777777777688999987******************9998886.....56899******* PP

      RasGAP   98 elekvsqmleknldkLkelvneildsIfksleqlPvgiRiickqirekvkekfpdaseeeilnligsflflrfliPaivnPklfglvdkqiseeqrr 194 
                  +++ +++    +l++L++l+++++ ++ +++e++P+++++++ q++ +++ +fp+as+e ++ +ig+f+f++++ P +++P++++lv+  i+  qr+
  EPX72975.1  949 QHSPTRNLYVGRLRELRKLCQSFIVALSRNIESFPYSLCYVASQLKLSLESNFPSASKEWVFGIIGRFVFDNYIKPLLISPDNYKLVEGHINALQRK 1045
                  ************************************************************************************************* PP

      RasGAP  195 nLtliaKllqnla 207 
                  nL   + +l +++
  EPX72975.1 1046 NLNCFSDILSEIF 1058
                  **99999988887 PP

>> CH  Calponin homology (CH) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.7   0.0     5e-19   2.2e-15       5     104 ..      26     125 ..      22     127 .. 0.89

  Alignments for each domain:
  == domain 1  score: 56.7 bits;  conditional E-value: 5e-19
                 HHHHHHHHHHHTTSTTSSTTSCHHHHHTTSHHHHHHHHHHSTTTSSGGGSTTT..HHHHHHHHHHHHHHHHHHTTCHTTSS.-HHHHHTTSHH.HHHHH CS
          CH   5 kellrWinshleeagpkvkvedfeedlrDGvlLckLlnklapglvdkkklnks..efkkleNinlaldvaekklgvpkvli.eaedlvegknk.svltl 99 
                  e+ +Wi+++l  +     +++fe++lr+Gv+L+kL+ +++p   +++  + +  +f++ +Nin++l +++ ++++p++   e +d++egkn  +v+ +
  EPX72975.1  26 TEAKNWIEECLDAD--LGPISNFEQSLRNGVVLAKLVLRFQPFR-RFRVFESDelQFRHSDNINKFLGFIA-DINLPEIFHfELTDIYEGKNLpKVIYC 120
                 6889*******664..5567********************9966.5555555578****************.*************************** PP

                 HHHHH CS
          CH 100 laqLf 104
                 +++L+
  EPX72975.1 121 IHALS 125
                 **995 PP

>> IQ  IQ calmodulin-binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.0   0.0    0.0059        26       7      19 ..     320     332 ..     319     334 .. 0.88
   2 !   10.6   0.0     9e-05       0.4       6      21 .]     349     364 ..     349     364 .. 0.92
   3 ?    2.0   0.0     0.053   2.4e+02       5      19 ..     406     420 ..     404     421 .. 0.83
   4 ?    2.1   0.0     0.048   2.1e+02       2      18 ..     433     449 ..     432     451 .. 0.87
   5 ?    1.2   0.0     0.096   4.3e+02       4      19 ..     465     480 ..     463     481 .. 0.86
   6 ?    3.9   0.2     0.013        57       9      21 .]     497     509 ..     497     509 .. 0.91
   7 ?    2.8   0.0     0.029   1.3e+02       5      21 .]     523     539 ..     520     539 .. 0.79
   8 ?    1.8   0.1     0.058   2.6e+02       7      18 ..     555     566 ..     555     567 .. 0.88
   9 !    7.8   0.0   0.00069       3.1       3      17 ..     581     595 ..     579     597 .. 0.90
  10 ?    4.0   0.0     0.012        54       4      17 ..     612     625 ..     610     628 .. 0.87
  11 !   10.5   0.0   9.6e-05      0.43       4      20 ..     642     658 ..     639     659 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.0059
                 HHHHHHHHHHHHH CS
          IQ   7 IQaawRGylaRkr 19 
                  Qa++RG  aR +
  EPX72975.1 320 VQACCRGVIARVK 332
                 5**********76 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 9e-05
                 HHHHHHHHHHHHHHHH CS
          IQ   6 kIQaawRGylaRkryk 21 
                 ++Qa +RGyl R  yk
  EPX72975.1 349 TFQAMVRGYLSRSTYK 364
                 58***********997 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.053
                 HHHHHHHHHHHHHHH CS
          IQ   5 ikIQaawRGylaRkr 19 
                  k+Qa++R+   R+ 
  EPX72975.1 406 PKLQAVIRAGFYRRS 420
                 59******9999885 PP

  == domain 4  score: 2.1 bits;  conditional E-value: 0.048
                 HHHHHHHHHHHHHHHHH CS
          IQ   2 kaaikIQaawRGylaRk 18 
                 ++ ++IQ+   Gyl+R 
  EPX72975.1 433 ASFTLIQSSAHGYLTRH 449
                 6789***********97 PP

  == domain 5  score: 1.2 bits;  conditional E-value: 0.096
                 HHHHHHHHHHHHHHHH CS
          IQ   4 aikIQaawRGylaRkr 19 
                  i +Q+  RG l R r
  EPX72975.1 465 FIQFQSLLRGALFRNR 480
                 6899******999975 PP

  == domain 6  score: 3.9 bits;  conditional E-value: 0.013
                 HHHHHHHHHHHHH CS
          IQ   9 aawRGylaRkryk 21 
                 a +RG+ +R++++
  EPX72975.1 497 AICRGFSTRRKFH 509
                 68*********96 PP

  == domain 7  score: 2.8 bits;  conditional E-value: 0.029
                 HHHHHHHHHHHHHHHHH CS
          IQ   5 ikIQaawRGylaRkryk 21 
                 +++    RGyl R  yk
  EPX72975.1 523 TILSTLSRGYLLRNIYK 539
                 5666678******9997 PP

  == domain 8  score: 1.8 bits;  conditional E-value: 0.058
                 HHHHHHHHHHHH CS
          IQ   7 IQaawRGylaRk 18 
                 +Q+ +RG l  +
  EPX72975.1 555 LQSLCRGLLSQR 566
                 7******99876 PP

  == domain 9  score: 7.8 bits;  conditional E-value: 0.00069
                 HHHHHHHHHHHHHHH CS
          IQ   3 aaikIQaawRGylaR 17 
                 + +++Q+++RG l+R
  EPX72975.1 581 SFTTLQSYIRGILTR 595
                 679**********99 PP

  == domain 10  score: 4.0 bits;  conditional E-value: 0.012
                 HHHHHHHHHHHHHH CS
          IQ   4 aikIQaawRGylaR 17 
                 ++ IQ+a+R+ l R
  EPX72975.1 612 ILSIQSAVRAVLLR 625
                 567*********99 PP

  == domain 11  score: 10.5 bits;  conditional E-value: 9.6e-05
                 HHHHHHHHHHHHHHHHH CS
          IQ   4 aikIQaawRGylaRkry 20 
                 ++ +Q+ +RG laR ++
  EPX72975.1 642 ILALQSTIRGCLARSNF 658
                 6789**********998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1470 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       779  (0.0434492); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.88u 0.30s 00:00:01.18 Elapsed: 00:00:00.48
# Mc/sec: 9157.68
//
Query:       EPX72976.1  [L=447]
Description: 3-hydroxy-3-methylglutaryl-CoA synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   9.3e-114  379.8   0.8   1.2e-113  379.4   0.8    1.1  1  HMG_CoA_synt_C  Hydroxymethylglutaryl-coenzyme A synthase C t
    4.7e-84  280.6   1.2    1.4e-83  279.1   0.5    2.1  3  HMG_CoA_synt_N  Hydroxymethylglutaryl-coenzyme A synthase N t


Domain annotation for each model (and alignments):
>> HMG_CoA_synt_C  Hydroxymethylglutaryl-coenzyme A synthase C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  379.4   0.8  1.3e-117  1.2e-113       1     280 []     176     446 ..     176     446 .. 0.97

  Alignments for each domain:
  == domain 1  score: 379.4 bits;  conditional E-value: 1.3e-117
                     EEE-TT--EEEE----SEE---TT-S--EE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH.------GGG-SEEEE--SSHHHHHHHHHHHHHHH CS
  HMG_CoA_synt_C   1 ivfdrklrashmehayDFykPdlaseYPvvDGklslscYlkaldrcYksyskkvkkitkd.adkeftlddfdyvifhsPfcklvqkslarllynD 94 
                     iv++++lr++hmehayDFykPdl+seYP+vDG++sl+cY++ald++Y+ y+ +    +k+ +++  ++d+fdy++fh+P+ck+vqk++arlly+D
      EPX72976.1 176 IVLEPGLRGTHMEHAYDFYKPDLTSEYPYVDGHFSLECYVRALDKAYAAYNVRD--AAKNgKSEGLGIDRFDYCVFHAPTCKQVQKAYARLLYTD 268
                     89**************************************************96..4445258999***************************** PP

                     HHH.S-HHHHHHH-GGGGGGTT--GGGGGT-HHHHHHHHHHHHHHHHHHTGGGGHHHHHH---GGGHHHHHHHHHHHHS-HHHHTT-EEEEEEEE CS
  HMG_CoA_synt_C  95 flanassdkeeevkekleekddlkldesltdkdlekallkiakelfkkkvkpsllvptevGnmYtaslyaalasllskvsadelagkriglfsYG 189
                     ++ ++   ++++v+e l++     + ++ltdk+lek+l++i+ke+++++v+ps+++pt++GnmYtas++++l+slls+v a el+gkr+g++sYG
      EPX72976.1 269 YADQSGLAEFDSVRELLNTL---PAAKTLTDKTLEKTLMAITKERYNQRVHPSIYAPTNCGNMYTASVFSCLTSLLSRVPAAELQGKRVGAYSYG 360
                     ***9999999****999988...999********************************************************************* PP

                     TTTEEEEEEEEE-S--STTSHHHHHTTTTHHHHHHTSEEE-HHHHHHHHHHHHHHTT--SB---S-GGGS-TT-EEEEEE-TTS-EEEEE- CS
  HMG_CoA_synt_C 190 sGlaaslfslrvkqdvsedsildiakvldlkkkLdsRkevtPeefeealelrekahlkknfkpqgsidsLaegtyyLeevDdkfRRsYavk 280
                     sGla+s+fsl +k+dvs      ia++ ++ ++++sR+ +tP e+e+a+elr++ahlkknf+p+g+id+L++gtyyL+ +Dd+fRRsY+vk
      EPX72976.1 361 SGLASSFFSLIIKGDVSD-----IAHKANFVNDVESRHSMTPVEYENAIELRHEAHLKKNFTPKGNIDRLRSGTYYLTGIDDMFRRSYEVK 446
                     ****************99.....*****************************************************************987 PP

>> HMG_CoA_synt_N  Hydroxymethylglutaryl-coenzyme A synthase N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  279.1   0.5   1.5e-87   1.4e-83       3     174 .]       6     175 ..       4     175 .. 0.99
   2 ?   -1.1   0.0      0.17   1.5e+03      15      32 ..     266     283 ..     258     312 .. 0.83
   3 ?   -3.3   0.0       0.8   7.1e+03      90     127 ..     297     336 ..     277     342 .. 0.63

  Alignments for each domain:
  == domain 1  score: 279.1 bits;  conditional E-value: 1.5e-87
  HMG_CoA_synt_N   3 kdvgilaleiylpaqyvdqaelekfdgveagkytiglgqtrmgfvsdredinslsltvvqkllertkldydaigrlevgtetiidksksvksvlm 97 
                     kd+gi++l +y p qyv q+ le +dgv+agkytiglg  +m+fv+dredi+s++lt +++l++++++d++ igrlevgtet+idksksvksvlm
      EPX72976.1   6 KDIGIKGLFLYTPNQYVGQSALEEHDGVSAGKYTIGLGLNKMAFVDDREDIYSFALTALSQLIQKYQIDVNNIGRLEVGTETLIDKSKSVKSVLM 100
                     89********************************************************************************************* PP

  HMG_CoA_synt_N  98 qlfeesgntdiegidtlnacyggtaalfnavnwiessawdgryalvvagdiaiydsgnarptggagavalligpdap 174
                     ql++e  n+++egid +nacygg +alfn+v+wiessawdgr+a+vvagdia+yd+gnarptggag+vall+gp+ap
      EPX72976.1 101 QLMGE--NSNVEGIDCVNACYGGVNALFNTVDWIESSAWDGRDAIVVAGDIALYDKGNARPTGGAGCVALLVGPNAP 175
                     *****..99*******************************************************************9 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.17
  HMG_CoA_synt_N  15 paqyvdqaelekfdgvea 32 
                      ++y dq+ l  fd+v +
      EPX72976.1 266 YTDYADQSGLAEFDSVRE 283
                     588999****99999976 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 0.8
  HMG_CoA_synt_N  90 ksvksvlmqlfeesgntdie.gidt.lnacyggtaalfna 127
                     k++  +lm + +e  n  +   i + +n+    ta++f +
      EPX72976.1 297 KTLEKTLMAITKERYNQRVHpSIYApTNCGNMYTASVFSC 336
                     4566677777777777766523433144444556666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (447 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       425  (0.0237046); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.47
# Mc/sec: 2888.12
//
Query:       EPX72977.1  [L=568]
Description: myo-inositol transporter Itr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.5e-109  365.7  21.4   4.2e-109  365.4  21.4    1.0  1  Sugar_tr  Sugar (and other) transporter
    2.8e-26   92.3  20.7    2.8e-26   92.3  20.7    2.0  2  MFS_1     Major Facilitator Superfamily
    5.8e-09   34.9   5.1    5.8e-09   34.9   5.1    2.4  3  TRI12     Fungal trichothecene efflux pump (TRI12)
     0.0016   16.9   2.0     0.0016   16.9   2.0    2.2  2  MFS_3     Transmembrane secretion effector


Domain annotation for each model (and alignments):
>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  365.4  21.4  9.3e-113  4.2e-109       3     450 ..      86     535 ..      84     537 .. 0.91

  Alignments for each domain:
  == domain 1  score: 365.4 bits;  conditional E-value: 9.3e-113
                 HHHHHHHHHHHHHHHCGGGTHHHHHHHHTSTT--SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS CS
    Sugar_tr   3 lvaalggllfgYdtgvigafltllkfaknfglsksksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgkns 101
                   a +ggllfgYdtgvi+++l +++    + l ks ++ ++       i+s++++Ga+iG+++ag l+d++GR+++++ia++++++g+++q++a+   s
  EPX72977.1  86 AAAGIGGLLFGYDTGVISGALVVMG----NSLGKSLTDGDK-----EYITSSTSLGALIGGIVAGALADFLGRRPVIAIASIIVIVGSIVQVTAH---S 172
                 56789********************....333333333333.....479**********************************************...* PP

                 -TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHHHHHHHHHHGGGS---HHHHHH CS
    Sugar_tr 102 vevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglglnktsnadgwrillglqlvpallllilllflPESPrylve 200
                 ++ +i gR+++GigvGlas +vP+y+sE+Ap k+Rg+lv +y + it+G++va+++++++++++n  gwr+++gl++vpa ++l++l++lPESPr l++
  EPX72977.1 173 LWHMIGGRFVIGIGVGLASLIVPLYLSELAPSKIRGRLVIVYVFLITLGQVVAYGIDTAFEHVKN--GWRYMVGLAIVPAFIQLLILVWLPESPRLLIK 269
                 *****************************************************************..******************************** PP

                 TT-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH..............HTTHHHHSH...HHHHHHHHHHHHHHTTHHHHHHHTTTHHHHSS-THHH CS
    Sugar_tr 201 kgkeeeakevlaklrgeedadrelaeekdsleaeqeee.........kaswkellssktvrqrlligvvlqifqqltGinaimyysptifenlglsksl 290
                 k+k ++a e+la +  ++ +  e++ + + ++++++            +++kel    +++++l+++++lq++qql+G n++my+s+tif+n+g++++ 
  EPX72977.1 270 KDKAKKAYETLASIYPTAHP-YEIQTKLHLIQEGVRDPftgtrfqkiLKTLKELYFVPSNFRALILACGLQSLQQLSGFNSLMYFSSTIFQNVGFDNPT 367
                 *************8777544.46777777777776655777666555556666666666**************************************** PP

                 HHHHHHHHHHHHHHHHHHHHHHHS-SHHHHHHHHHHHHHHHHHHH..HHHHTTSS............CHHHHHHHHHHHHHHHTTTTHHHHHHHHHHSH CS
    Sugar_tr 291 lvtiivgvvnfvatfvaiflvdrfGRRtllllGaagmaicfvilgivalllvaks.........kaasivaivfialfialfalgwgpvpwvlvsElfp 380
                 ++ +i+  +nfv+t+va+ ++drfGRR lll+ + gm+ ++++ + ++++l+  +         + ++iv+++ +++++a +a g+g +pw   sElfp
  EPX72977.1 368 ATGLIIAGTNFVFTIVAFTVIDRFGRRILLLVTLWGMIGALIVCAVAFHFLPRDEngnvkagqgNPWAIVVLISMIVYVASYASGLGNLPWQQ-SELFP 465
                 *********************************99999999999966666666667999999888899************************9.***** PP

                 TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHT-HHHHHHHHHHHHHHHHHHHHS--STT--CCCCGG CS
    Sugar_tr 381 qsvRskalaiavavnwlanflisllfpiiteaigggyvflvfaglavlfiifvfffvpetkgrtleeiee 450
                 + vR++++ +a+avnw +n++i+ +f ++++ i+ +++f++++gl+  ++++ +f++pe++  t+eei+ 
  EPX72977.1 466 MTVRGLGTGMATAVNWASNLAIGSTFLTLMSEITPTGTFALYGGLCFGGFVMSYFCYPEFADYTIEEISI 535
                 *******************************************************************975 PP

>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.3  20.7   6.2e-30   2.8e-26       3     312 ..      90     444 ..      88     461 .. 0.75
   2 !    5.1   3.9     0.002       8.8     112     174 ..     462     524 ..     460     559 .. 0.87

  Alignments for each domain:
  == domain 1  score: 92.3 bits;  conditional E-value: 6.2e-30
       MFS_1   3 laaflsalarsilgpalplalaedlgispse..igllltlyalgaavaslplGrlsdrfGrrrvlllglllfalg.lllllfasslwlllvlrvlqGlg 98 
                 ++++l +++ ++++ al   ++++lg s +      +++  +lga+++ +++G+l+d +Grr+v+ ++ ++ ++g ++  + a+slw ++ +r++ G+g
  EPX72977.1  90 IGGLLFGYDTGVISGALV-VMGNSLGKSLTDgdKEYITSSTSLGALIGGIVAGALADFLGRRPVIAIASIIVIVGsIVQVT-AHSLWHMIGGRFVIGIG 186
                 789999************.9******5555544999***************************999999999999333333.5**************** PP

       MFS_1  99 agalfpagaaliadwfpkeergraigllsagfslGailgpllgglla.sslgWravfyilaivsllafvlfllllpeepperkrkspkeee........ 188
                  g++  ++  ++++++p + rgr + ++   + lG ++++++  ++     gWr++  ++ + +++ ++ +l++lpe+p+   +k ++++         
  EPX72977.1 187 VGLASLIVPLYLSELAPSKIRGRLVIVYVFLITLGQVVAYGIDTAFEhVKNGWRYMVGLAIVPAFIQLL-ILVWLPESPRLLIKKDKAKKAyetlasiy 284
                 **********************************************999999*****999999999966.457787777777777777777******** PP

       MFS_1 189 ...............kgtgpaplvp.........awkallkdpvlwillialllf.....ffgfsglltllplylqevlglsglllaglllallalvga 258
                                +  ++ p++          + ++ + +  +  +li +++        gf++l++++ ++  +  g+++   +g    ++a  ++
  EPX72977.1 285 ptahpyeiqtklhliQEGVRDPFTGtrfqkilktLKELYFVPSNF-RALILACGLqslqqLSGFNSLMYFSSTI-FQNVGFDNPTATG---LIIAGTNF 378
                 ******777777776333333333365332222222233333333.2333333333455544555577777775.7888888324444...33333333 PP

       MFS_1 259 ilallagrlsdrlgrrrrlllallllllaalglallavt............ssavllllvlvliGf 312
                 ++ ++a  ++dr+grr+ ll++l +++ a++ +a++ ++            + ++++++vl+ + +
  EPX72977.1 379 VFTIVAFTVIDRFGRRILLLVTLWGMIGALIVCAVAFHFlprdengnvkagQGNPWAIVVLISMIV 444
                 335555555699999999999999999999999999999888899999999777777775554333 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.002
       MFS_1 112 dwfpkeergraigllsagfslGa.ilgpllggllasslgWravfyilaivsllafvlfllllpe 174
                 ++fp + rg+++g+++a + ++  ++g  +  l++  +  +++f + +++++ +fv+ ++ +pe
  EPX72977.1 462 ELFPMTVRGLGTGMATAVNWASNlAIGSTFLTLMS-EITPTGTFALYGGLCFGGFVMSYFCYPE 524
                 7899999***************9999999999998.7779****************98888865 PP

>> TRI12  Fungal trichothecene efflux pump (TRI12)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.9   5.1   1.3e-12   5.8e-09      87     232 ..     129     275 ..     101     285 .. 0.74
   2 !    7.4   0.4   0.00028       1.2      88     128 ..     374     413 ..     347     419 .. 0.69
   3 ?   -3.5   0.3      0.56   2.5e+03     250     284 ..     439     474 ..     434     479 .. 0.70

  Alignments for each domain:
  == domain 1  score: 34.9 bits;  conditional E-value: 1.3e-12
       TRI12  87 wttgqavsilvmgrltdrfgrrpfvilthilglvgaivgctatkfntllaamtllgvaagpag.asplfvgelmsnktkflgllivsipvvvtsglspy 184
                  ++g  +  +v g l+d +grrp++ ++ i+ +vg+iv +ta  +  ++    ++g+  g a    pl++ el   k +   l+iv +  +++  +  y
  EPX72977.1 129 TSLGALIGGIVAGALADFLGRRPVIAIASIIVIVGSIVQVTAHSLWHMIGGRFVIGIGVGLASlIVPLYLSELAPSKIRG-RLVIVYVFLITLGQVVAY 226
                 45677788899*************************************************998358*******9887663.355555555555545544 PP

       TRI12 185 lgqrla...iqgswrwifyiyiitsaiavllivvwyyppsfaqlhgk.kvrk 232
                  g   a   ++  wr+++ + i+ + i  lli+vw  p s + l  k k++k
  EPX72977.1 227 -GIDTAfehVKNGWRYMVGLAIVPAFI-QLLILVWL-PESPRLLIKKdKAKK 275
                 .444431227889***99998876655.57888886.666666655414444 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.00028
       TRI12  88 ttgqavsilvmgrltdrfgrrpfvilthilglvgaivgcta 128
                 +  + v  +v   + drfgrr ++++t + g++ga++ c+ 
  EPX72977.1 374 AGTNFVFTIVAFTVIDRFGRRILLLVT-LWGMIGALIVCAV 413
                 333456666777899******887776.89******99975 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 0.56
       TRI12 250 gvslfllgvsw.ggkpnspwnsakviglissglgsl 284
                  +s+++   s+  g  n pw+ + +  +   glg+ 
  EPX72977.1 439 LISMIVYVASYaSGLGNLPWQQSELFPMTVRGLGTG 474
                 455555555552578899999999999999999985 PP

>> MFS_3  Transmembrane secretion effector
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   2.0   3.6e-07    0.0016      50     120 ..     125     190 ..      79     232 .. 0.86
   2 ?    1.0   0.6     0.024   1.1e+02      59      96 ..     378     414 ..     367     420 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 3.6e-07
       MFS_3  50 vqaaatLPifllsilaGalaDnfdrRkvllavqlllalvsvlltvlaalgllspwlllaltlligiGaaln 120
                 +  +++L  ++  i+aGalaD + rR v+ ++ ++++++s++ +        s w +++  ++igiG  l 
  EPX72977.1 125 ITSSTSLGALIGGIVAGALADFLGRRPVIAIASIIVIVGSIVQV-----TAHSLWHMIGGRFVIGIGVGLA 190
                 66899*********************998888777777776543.....34588************98764 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.024
       MFS_3  59 fllsilaGalaDnfdrRkvllavqlllalvsvlltvla 96 
                 f+++i+a  + D f rR +ll v l+ +++++++  +a
  EPX72977.1 378 FVFTIVAFTVIDRFGRRILLL-VTLWGMIGALIVCAVA 414
                 8999**********9986665.5566666666655544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (568 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       707  (0.0394333); expected 358.6 (0.02)
Passed bias filter:                      366  (0.0204139); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.63u 0.31s 00:00:00.94 Elapsed: 00:00:00.49
# Mc/sec: 3503.16
//
Query:       EPX72978.1  [L=363]
Description: src y domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.1e-13   48.4   0.0    1.1e-12   47.3   0.0    1.6  1  SH3_1     SH3 domain
      9e-11   41.5   0.0    1.6e-10   40.6   0.0    1.5  1  SH3_9     Variant SH3 domain
    3.8e-08   32.9   0.0    6.8e-08   32.1   0.0    1.4  1  SH3_2     Variant SH3 domain
     0.0034   17.6   1.3     0.0043   17.3   0.2    1.8  2  FCH       Fes/CIP4, and EFC/F-BAR homology domain


Domain annotation for each model (and alignments):
>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.3   0.0   2.5e-16   1.1e-12       1      48 []     305     354 ..     305     354 .. 0.96

  Alignments for each domain:
  == domain 1  score: 47.3 bits;  conditional E-value: 2.5e-16
                 EESSSBEXSSTTBXEBSTTEEEEEEEECSSSEEEEEETTS..TEEEEEEG CS
       SH3_1   1 iAlYDYeaeesdELsfkkGDviivleksedgWwkgrlkgt..gkeGliPs 48 
                 +AlY+Y a  s+E+s++ GD++ivl++++dgWwkgr+     g +Gl+Ps
  EPX72978.1 305 RALYNYRALLSSEISMQSGDILIVLNRQKDGWWKGRVVKPkvGNVGLFPS 354
                 7***********************************99878999*****8 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.6   0.0   3.7e-14   1.6e-10       1      49 []     306     358 ..     306     358 .. 0.94

  Alignments for each domain:
  == domain 1  score: 40.6 bits;  conditional E-value: 3.7e-14
       SH3_9   1 AlypyepreddeLsLqrGDvitvieesedgWlegs....ltGrtGlvPanyve 49 
                 Aly+y +    e+s+q GD+++v+++  dgW+ g+    + G+ Gl+P+ny++
  EPX72978.1 306 ALYNYRALLSSEISMQSGDILIVLNRQKDGWWKGRvvkpKVGNVGLFPSNYIQ 358
                 89**********************999*******988555***********97 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.1   0.0   1.5e-11   6.8e-08       1      56 [.     303     359 ..     303     360 .. 0.94

  Alignments for each domain:
  == domain 1  score: 32.1 bits;  conditional E-value: 1.5e-11
                 EEEESS-B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEE.C...CCEEEEEGCGEEE CS
       SH3_2   1 yvraiedyvgedkseLsfkkGdvikvlslgskdsdgwwegev.g...GrvGlfPsslvee 56 
                 yvra+ +y +   se+s + Gd++ vl   ++  dgww+g+v +   G vGlfPs++ +e
  EPX72978.1 303 YVRALYNYRALLSSEISMQSGDILIVL---NRQKDGWWKGRVvKpkvGNVGLFPSNYIQE 359
                 899999*********************...**********9986778999*******998 PP

>> FCH  Fes/CIP4, and EFC/F-BAR homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.2   9.6e-07    0.0043      28      76 ..       2      46 ..       1      47 [. 0.90
   2 ?   -3.5   0.1         3   1.3e+04      42      59 ..     258     269 ..     254     284 .. 0.46

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 9.6e-07
                HHHHHHHHHHHHHCT----TT-.....HHHHHHHHHHHHHHHHHHHHHH CS
         FCH 28 eiEkeYakkLqkLakkylkrrkkkseestlvtawtvlleeteklaqshl 76
                  E++Ya kL +L+k+ +++    +++s+l++ ++++ +e+ +  ++hl
  EPX72978.1  2 VAEQDYAGKLARLTKSLKGN----HSGSSLKDFYKKVSSEIMNSNKEHL 46
                68***************994....4789**************9999997 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 3
                 T----TT-.....HHHHH CS
         FCH  42 kkylkrrkkkseestlvt 59 
                 kk ++++      +t++t
  EPX72978.1 258 KKSSNKD------QTFST 269
                 3333322......22222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (363 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       651  (0.0363099); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.46
# Mc/sec: 2371.41
//
Query:       EPX72979.1  [L=861]
Description: fungal family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.5e-22   80.3   8.1    1.5e-22   80.3   8.1    2.7  3  DUF1765          Protein of unknown function (DUF1765)
  ------ inclusion threshold ------
       0.08   11.3   2.5       0.13   10.6   2.5    1.2  1  Lact_bio_phlase  Lacto-N-biose phosphorylase N-terminal TIM b


Domain annotation for each model (and alignments):
>> DUF1765  Protein of unknown function (DUF1765)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.6      0.26   2.3e+03      48      84 ..     155     192 ..     124     271 .. 0.61
   2 ?   -3.0   0.1       1.1   9.8e+03      27      64 ..     289     325 ..     275     334 .. 0.62
   3 !   80.3   8.1   1.7e-26   1.5e-22       3     125 .]     479     594 ..     477     594 .. 0.94

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.26
     DUF1765  48 wefwlsvikmml.esdnvqsllrtlsflfniwdliped 84 
                  ef +s ++ +  ++   + l +t  +l+n w+++ + 
  EPX72979.1 155 SEFLISYLNGLSvRCLTDVELDKTRHILYNWWSFLIRL 192
                 45555554444445555555555666677777766444 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.1
     DUF1765  27 leefinileenekselpelldwefwlsvikmmlesdnv 64 
                 ++ f + l++nek  lpe    +f+ + ++ +++s n 
  EPX72979.1 289 IKYFSSKLKRNEK-DLPEKYMSPFFPKHLHSIMSSINL 325
                 3444444444444.777777777777777777776554 PP

  == domain 3  score: 80.3 bits;  conditional E-value: 1.7e-26
     DUF1765   3 sllkaiakktslydsnavfllldlleefinileenekselpelldwefwlsvikmmlesdnvqsllrtlsflfniwdlipedeerkkklfldlLlseev 101
                  +l+ i + + +y+++a f+ ++l e +++i+++++++       ++fw++++k+++ + n++ ++r+++f+++iw ++  d e k++  l +Ll +++
  EPX72979.1 479 YILQGIGQFIRVYEFQASFMYCSLSESWFEIFFDYSHRP-----RVSFWVEAMKKLVGTSNHMAIVRSITFIYTIWPYL--DLEAKEMISLRWLLVQKT 570
                 5677778889*************************9844.....89*********************************..699*************** PP

     DUF1765 102 feklflhwsplVRsyyirLLvwri 125
                 fe lflh   lVR+y++rLL+wr+
  EPX72979.1 571 FEYLFLHHFSLVRAYFHRLLCWRL 594
                 ***********************7 PP

>> Lact_bio_phlase  Lacto-N-biose phosphorylase N-terminal TIM barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   2.5   1.5e-05      0.13     150     245 ..     488     580 ..     474     588 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 1.5e-05
  Lact_bio_phlase 150 layiiWdpvqmYnaltndwkdkeheitldvrqpetreyvleklkkwleehpevdvvRfttffyqftlvfnekekekfv.dWfgysasvspkale 242
                      + +  ++   mY  l++ w     ei +d  ++   ++ +e++kk + + +++ +vR  tf+y      + ++ke ++  W   + +     l+
       EPX72979.1 488 IRVYEFQASFMYCSLSESW----FEIFFDYSHRPRVSFWVEAMKKLVGTSNHMAIVRSITFIYTIWPYLDLEAKEMISlRWLLVQKTFEYLFLH 577
                      55556667789********....69***************************************988888888887653788888888888887 PP

  Lact_bio_phlase 243 eFe 245
                      +F 
       EPX72979.1 578 HFS 580
                      775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (861 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       506  (0.0282224); expected 358.6 (0.02)
Passed bias filter:                      307  (0.0171231); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.26s 00:00:00.92 Elapsed: 00:00:00.43
# Mc/sec: 6007.04
//
Query:       EPX72980.1  [L=913]
Description: Taz1 interacting factor 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.9e-32  109.9   3.7    2.4e-31  108.5   0.3    2.7  2  ATG11            Autophagy-related protein 11
     0.0063   16.3   2.4     0.0063   16.3   2.4    3.5  3  Geminin          Geminin
  ------ inclusion threshold ------
      0.013   15.9   0.7      0.013   15.9   0.7    4.8  5  Snapin_Pallidin  Snapin/Pallidin
       0.24   12.0  16.1        2.4    8.8   0.9    4.3  3  YabA             Initiation control protein YabA


Domain annotation for each model (and alignments):
>> ATG11  Autophagy-related protein 11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.3     0.081   3.6e+02       6      50 ..     563     606 ..     559     617 .. 0.86
   2 !  108.5   0.3   5.2e-35   2.4e-31       3     128 ..     786     909 ..     784     910 .. 0.96

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.081
       ATG11   6 krfkdveelakkltkenkskkekleklqseskekitlknfkvgDL 50 
                 k  +++e+l ++l++  k +++++++ +s ++e+i l + +++D+
  EPX72980.1 563 KYQTEIEQLRHELNEALKRNDDLSTEIHS-KDERIRLLETENDDI 606
                 56789999999999999988888888887.889****99999997 PP

  == domain 2  score: 108.5 bits;  conditional E-value: 5.2e-35
       ATG11   3 svikrfkdveelakkltkenkskkekleklqseskekitlknfkvgDLalflptrreeqdlstqpwaafnagaphYfLkeeselalksrewlvGrivki 101
                  v++ ++++++   ++++e +s+++k+ k+  es++k++l+nfk+g Lalflptrr+   + ++ waafn++aphY+L+ +++ + +srewlvGri++i
  EPX72980.1 786 YVVNVLSEAHNNELRWKREFQSSRDKALKAILESQTKVSLRNFKQGTLALFLPTRRRM--QGHRIWAAFNVNAPHYYLNIQNNSKIESREWLVGRITSI 882
                 588899999999*******************************************995..699************************************ PP

       ATG11 102 eekvvdekdeNpfklskglkwylvkaa 128
                 e++v+d + +   kl+ g++w+ v+a 
  EPX72980.1 883 EDHVADGTIDKWLKLPMGTVWHYVDAV 909
                 ************************985 PP

>> Geminin  Geminin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0     0.083   3.7e+02     152     185 ..     287     320 ..     253     325 .. 0.77
   2 !   16.3   2.4   1.4e-06    0.0063     115     155 ..     567     606 ..     557     609 .. 0.88
   3 ?    0.5   3.0     0.097   4.3e+02     142     190 ..     651     700 ..     634     706 .. 0.82

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.083
     Geminin 152 NeeLaelAeHVqymadmieRLtgkspdnleelke 185
                    L+   +HVq ++ +i+ L++ +   +e+ k+
  EPX72980.1 287 DSRLQAHIHHVQKLSALINDLHDFACSLFESRKS 320
                 566888889*********9999988888888765 PP

  == domain 2  score: 16.3 bits;  conditional E-value: 1.4e-06
     Geminin 115 evAeeRrKaLyevLqEnEkLhkeiEqkdeeiarLkeENeeL 155
                 e+ e+ r  L e+L+ n+ L  ei +kde+i+ L++EN+++
  EPX72980.1 567 EI-EQLRHELNEALKRNDDLSTEIHSKDERIRLLETENDDI 606
                 44.788999*****************************996 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.097
     Geminin 142 deeiarLkeENeeLaelAeHVqymadmieR..Ltgkspdnleelkelalde 190
                  +ei+ Lk+  ee  e+A+  q + +++e   L  +++++lee+ +  +++
  EPX72980.1 651 KNEISILKH-QEEYSEMAKDSQVVKQLLEErdLATEKQKKLEEVADSRMEQ 700
                 688999987.5899*************984369999*******99988875 PP

>> Snapin_Pallidin  Snapin/Pallidin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.1      0.33   1.5e+03       8      47 ..     262     301 ..     250     319 .. 0.59
   2 ?    0.8   0.0      0.15   6.8e+02      70      89 ..     478     497 ..     474     498 .. 0.90
   3 ?   15.9   0.7   2.9e-06     0.013       2      54 ..     555     606 ..     554     617 .. 0.87
   4 ?   -2.0   0.0       1.2   5.2e+03      48      68 ..     625     646 ..     615     660 .. 0.62
   5 ?   -1.1   1.9      0.57   2.6e+03      31      80 ..     675     723 ..     646     727 .. 0.73

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.33
  Snapin_Pallidin   8 lellepkldeldeklkelrqsQeeLleqldrlnekLkele 47 
                      +e + ++l++l e+ +el ++   L ++l+   + +++l+
       EPX72980.1 262 SERINSDLKDLIEHCSELVKTPISLDSRLQAHIHHVQKLS 301
                      4444555555555555555555555555555555555544 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.15
  Snapin_Pallidin  70 krmsslnerlqklkkRaekL 89 
                      +++++l+erl   + R ++L
       EPX72980.1 478 QEITTLQERLAIYQNRCNNL 497
                      7899************9999 PP

  == domain 3  score: 15.9 bits;  conditional E-value: 2.9e-06
  Snapin_Pallidin   2 aLaegllellepkldeldeklkelrqsQeeLleqldrlnekLkeleeaqeaev 54 
                       ++egl + ++ ++++l+++l+e  +  ++L+ ++++  e+++ le +++ ++
       EPX72980.1 555 SFSEGLATKYQTEIEQLRHELNEALKRNDDLSTEIHSKDERIRLLETEND-DI 606
                      69****************************************96666665.44 PP

  == domain 4  score: -2.0 bits;  conditional E-value: 1.2
  Snapin_Pallidin  48 eaqe.aevlpdlkeyakKLvni 68 
                      e q+  +v + +++ + KL++i
       EPX72980.1 625 EKQNlMSVCSHFENKVSKLQEI 646
                      4444444666666666666655 PP

  == domain 5  score: -1.1 bits;  conditional E-value: 0.57
  Snapin_Pallidin  31 eLleqldrlnekLkeleeaqeaevlpdlkeyakKLvnikkrmsslnerlq 80 
                      +Lle+ d  +ek k+lee+++ + ++++k   +KL ++  r ++l ++lq
       EPX72980.1 675 QLLEERDLATEKQKKLEEVAD-SRMEQCKLLTQKLFTLVFRCHELRTVLQ 723
                      555555566667777777777.7789999999998888777777777776 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.1     0.054   2.4e+02       4      51 ..     252     300 ..     248     325 .. 0.74
   2 ?    8.8   0.9   0.00055       2.4      18      53 ..     562     599 ..     547     621 .. 0.70
   3 ?    5.8   4.6    0.0046        21       2      66 ..     625     691 ..     624     729 .. 0.78

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.054
                 HHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        YabA   4 kelfdkleeleeqleellee.leelkeelaelleenaeLeleneklrer 51 
                 ++lf+++++l+e++++ l++ +e+  e +++ +  +++L++  ++++++
  EPX72980.1 252 DSLFQEISSLSERINSDLKDlIEHCSELVKTPISLDSRLQAHIHHVQKL 300
                 5689999999999987666514566666677788888888888888775 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00055
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH..X CS
        YabA  18 eelleeleelkeelaelleenaeLeleneklrerl..e 53 
                 ++ ++e+e+l++el+e l++n++L++e ++  er+   
  EPX72980.1 562 TKYQTEIEQLRHELNEALKRNDDLSTEIHSKDERIrlL 599
                 467889********************987766666332 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.0046
                 -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH..HHHHHHHHHHHHHHHHHHHHXXXXXXXXXXXXXX CS
        YabA   2 dkkelfdkleeleeqleelleeleelkeela..elleenaeLeleneklrerleeeekkekekkkel 66 
                 +k++l++  +++e+++++l+e  +  k+e++  +  ee +e+  + + ++++lee++ +++++kk  
  EPX72980.1 625 EKQNLMSVCSHFENKVSKLQEICNVFKNEISilKHQEEYSEMAKDSQVVKQLLEERDLATEKQKKLE 691
                 68999***********************9872256789999999*********55444443333322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (913 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1433  (0.0799264); expected 358.6 (0.02)
Passed bias filter:                      509  (0.0283898); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.83u 0.30s 00:00:01.12 Elapsed: 00:00:00.47
# Mc/sec: 5811.39
//
Query:       EPX72981.1  [L=230]
Description: hydrolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.3e-09   35.8   0.0    2.3e-08   34.4   0.0    1.7  1  HAD_2           Haloacid dehalogenase-like hydrolase
    9.5e-08   32.0   0.0    1.8e-06   27.9   0.0    2.2  2  Hydrolase_like  HAD-hyrolase-like
      0.001   19.4   0.0      0.023   15.0   0.0    2.1  2  Hydrolase       haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> HAD_2  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.4   0.0   3.8e-12   2.3e-08       3     174 ..       9     205 ..       7     207 .. 0.76

  Alignments for each domain:
  == domain 1  score: 34.4 bits;  conditional E-value: 3.8e-12
       HAD_2   3 FDlDgTlldteeliiqafnelleeyglselseeelrkliglslrellrklgeseeeee......................kieellrkyneekkkkevk 79 
                 FD  gTll   + +  ++ e++++yg+ + ++ e++k     l+el +  ++s  +++                      + e+l+++y ++   +   
  EPX72981.1   9 FDAFGTLLQLAKPVPFVYYETAQKYGI-SATLAEIKKNSDRALKELSKTPKSSGLKSDrsprerwfeiieksfpcpipnkMAEDLWNHYSTKSAYHIHP 106
                 555566666666666666666666655.56666666666666665555555554444466666667777777777777779999*9*999999996666 PP

       HAD_2  80 pydgvkelLeeLkeagyklgivTsksreaveekleqlgiesyFdvivtsedvekkKPdpeviekalekl......klkkeeviyvGDsp.tDieaakka 171
                 +++g      + ++++y++gi+++ + + + + l+ +g+ +++dv   s d++ +KP+  ++e + +k+         ++e++ +GD   +D+eaa+++
  EPX72981.1 107 LFEGFLR--SNAHKKEYSIGIISNTD-DRIYSVLRSCGVADFIDVYAFSYDIGYQKPEKGIFEYVRNKTgeltgvCPASKECLHFGDDLiKDVEAARNI 202
                 7788766..456899*******9865.567899***********************************9877754446789*******99********* PP

       HAD_2 172 gik 174
                 g +
  EPX72981.1 203 GWH 205
                 976 PP

>> Hydrolase_like  HAD-hyrolase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.042   2.5e+02       2      19 ..      18      35 ..      17      62 .. 0.83
   2 !   27.9   0.0     3e-10   1.8e-06       2      44 ..     157     205 ..     156     207 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.042
                    .STTSSHHHHHHHHHH-- CS
  Hydrolase_like  2 lgKPepemydfalevlgs 19
                    l KP p++y + ++++g+
      EPX72981.1 18 LAKPVPFVYYETAQKYGI 35
                    579999999999999965 PP

  == domain 2  score: 27.9 bits;  conditional E-value: 3e-10
                     .STTSSHHHHHHHHHH---......GGGEEEEES-TTTHHHHHHHCT-E CS
  Hydrolase_like   2 lgKPepemydfalevlgsd......peevlmiGDrlatDiagAnnaGwk 44 
                     + KPe++++++ ++++g+       ++e+l  GD+l  D+++A+n+Gw+
      EPX72981.1 157 YQKPEKGIFEYVRNKTGELtgvcpaSKECLHFGDDLIKDVEAARNIGWH 205
                     68**************44445555599*********************8 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0     0.022   1.3e+02       2      26 ..       5      29 ..       4      80 .. 0.67
   2 !   15.0   0.0   3.9e-06     0.023     131     210 .]     117     203 ..      98     203 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.022
                SEEEEESBTTTBCHHHHHHHHHHHH CS
                xxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  2 ktvvfDkdGTLttgepsvedvivsa 26
                +++ fD  GTL++  + v  v+ + 
  EPX72981.1  5 RLITFDAFGTLLQLAKPVPFVYYET 29
                6899********8876666665555 PP

  == domain 2  score: 15.0 bits;  conditional E-value: 3.9e-06
                 HHTTEEEEEEESSEHHHHHHHHHHTT.GGGESEEEEHHCESSTTTSHHHHHHHHHHHT......STGGGEEEEESSHH.HHHHHHHTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxx.xxxxxxxxx RF
   Hydrolase 131 kaagievvlltgdnpetaeraanqlG.ddyfdaviasdietvakpspegkvaaireLq......gkpeevamVGDgvn.DaaalaaAg 210
                 +++ + ++++++ + + +  +++ +G +d++d+   s++ +  kp++ +++++ ++ +         +e++++GD +  D++a+++ g
  EPX72981.1 117 HKKEYSIGIISNTDDRIYS-VLRSCGvADFIDVYAFSYDIGYQKPEKGIFEYVRNKTGeltgvcPASKECLHFGDDLIkDVEAARNIG 203
                 5567779999999998877.99999*88888**************************998888766889*******999*****9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       431  (0.0240393); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.46
# Mc/sec: 1495.41
//
Query:       EPX72982.1  [L=410]
Description: dolichol-P-Man dependent alpha(1-3) mannosyltransferase Alg3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.1e-121  406.7  29.2   1.2e-121  406.5  29.2    1.0  1  ALG3      ALG3 protein


Domain annotation for each model (and alignments):
>> ALG3  ALG3 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  406.5  29.2  6.9e-126  1.2e-121       3     358 .]      34     388 ..      32     388 .. 0.96

  Alignments for each domain:
  == domain 1  score: 406.5 bits;  conditional E-value: 6.9e-126
        ALG3   3 lllleavllvliikkvpYTeIDwkaYmqqvelflngerdYsklkGdtGPlvYPagfvyiysllysltdegenirlaQviFavlylltlllvlaiyakak 101
                 +l le+ ++++ii+kvpYTeIDw aYm+q++ fl+gerdY++l G+tGPlvYP+g+v +y+lly+lt++g+ni +aQ+iFa++yl++ ++v  i+++ +
  EPX72982.1  34 ILWLEVPFVMFIISKVPYTEIDWIAYMEQIDSFLSGERDYRSLVGSTGPLVYPGGHVLLYTLLYFLTNHGSNIVKAQYIFAFVYLCSSFVVGWIFKTVH 132
                 67889999******************************************************************************************* PP

        ALG3 102 vppyvlvllvlskRlhSiyvLRlFNDcvavlllvlaillllkkrwtlgsvlyslavsvKmnvllflPalllllllkegllktlaallvialvqvllglp 200
                 vp y++ llvlskRlhSi++LRlFND++  l++ l +l ++k+rwtl+++++s+a s+Km+ llflPa+l++ll++ g +kt+++++ +a vq+l+++p
  EPX72982.1 133 VPLYLYGLLVLSKRLHSIFILRLFNDSFNSLFASLFLLSACKRRWTLSTIFLSIASSIKMSSLLFLPAYLVILLQSAGPKKTWVNIFSFAFVQLLFSFP 231
                 *************************************************************************************************** PP

        ALG3 201 FlltnpveYlkraFdlsrqFlykwtvNwrflseevFlskefalaLLllhllllllfaltrwlkskakleavekkllkklkkkkeskelsaelillvlft 299
                 F ++  ++Y ++aFd++r+F ykwtvNwrfl++ +F s  f+l++L++h++ll++fa+ rw  ++++   ++ + + +l+   + +  s + il+ l+t
  EPX72982.1 232 F-SSFIWSYWTQAFDFGRVFDYKWTVNWRFLPKFIFYSPIFSLIVLFVHASLLVVFAVRRWNYPSKASPLQMVRSMLTLQPLPSVAPISVDFILTSLTT 329
                 *.5788********************************************************999765554555555666688899999********** PP

        ALG3 300 snliGivfarsLHYQFyswyfhslplllwstklslvlkllllllieyawnvyPstelsS 358
                 snliGi++arsLHYQFy+w+++ +p++l+++++s+  ++ll++l+ey+wnv+Pst++sS
  EPX72982.1 330 SNLIGILCARSLHYQFYAWFAWYVPYMLYQANFSMPSTILLCGLQEYSWNVFPSTTISS 388
                 *********************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (410 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       683  (0.0380947); expected 358.6 (0.02)
Passed bias filter:                      235  (0.0131073); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 2811.95
//
Query:       EPX72983.1  [L=103]
Description: cytosolic thioredoxin Trx1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.5e-30  104.5   0.5    2.8e-30  104.3   0.5    1.0  1  Thioredoxin    Thioredoxin
      5e-08   33.2   0.0    1.1e-07   32.1   0.0    1.6  1  Thioredoxin_8  Thioredoxin-like
    2.7e-06   27.8   0.2    2.1e-05   24.9   0.2    1.9  1  Thioredoxin_2  Thioredoxin-like domain
    3.4e-05   23.8   0.1    3.9e-05   23.5   0.1    1.2  1  AhpC-TSA       AhpC/TSA family
    0.00017   21.3   0.2    0.00024   20.8   0.2    1.4  1  Redoxin        Redoxin
    0.00067   19.4   0.0    0.00085   19.1   0.0    1.1  1  Thioredoxin_9  Thioredoxin
     0.0033   16.8   0.1     0.0034   16.8   0.1    1.1  1  OST3_OST6      OST3 / OST6 family, transporter family
     0.0076   16.4   0.2      0.012   15.8   0.2    1.4  1  Thioredoxin_7  Thioredoxin-like
  ------ inclusion threshold ------
      0.012   15.5   0.1      0.016   15.1   0.1    1.2  1  TraF           F plasmid transfer operon protein
        0.1   12.8   0.0       0.16   12.2   0.0    1.4  1  Glutaredoxin   Glutaredoxin


Domain annotation for each model (and alignments):
>> Thioredoxin  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.3   0.5   1.6e-33   2.8e-30       4     102 ..       5     100 ..       2     101 .. 0.95

  Alignments for each domain:
  == domain 1  score: 104.3 bits;  conditional E-value: 1.6e-33
                  ESSHHHHHHHHTTTSSEEEEEEE-TTSHHHHCHHHHHHHHHHHCTTTSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTEEEEEEESS-HHHHHHHHH CS
  Thioredoxin   4 vltkenFeeevakekklvlveFyApwCghCkalaPeleklaeelkdkvklakvdvdenedlakkyevegiPtlklfkngkevkkyegarekeklaafl 101
                  v ++e+F++ +a+ +klv+v+F+A+wCg+Cka++P++++++++++ +  ++kvdvde +++a++ +v+++P + l+kng+++++++ga++ +kl+a +
   EPX72983.1   5 VSKTEDFKAVIAQ-NKLVVVDFFATWCGPCKAISPKVDQFSKTYS-DAEFIKVDVDELSEIAAEAGVHAMPSFFLYKNGQKIAEVVGANP-AKLEAAI 99 
                  456788*******.*******************************.9*******************************************.9999998 PP

                  H CS
  Thioredoxin 102 k 102
                  k
   EPX72983.1 100 K 100
                  7 PP

>> Thioredoxin_8  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.1   0.0   6.2e-11   1.1e-07       1      51 [.      18      66 ..      17      87 .. 0.81

  Alignments for each domain:
  == domain 1  score: 32.1 bits;  conditional E-value: 6.2e-11
                   .SEEEEEE--SSSHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-SS.-HHHHH CS
  Thioredoxin_8  1 gkvvlLyfgaswcppckaftpklkelyeklkkkkkveivyvsldk.keeefe 51
                   +k+v++ f+a+wc pcka+ pk+++++++++   + e++ v +d+ +e + e
     EPX72983.1 18 NKLVVVDFFATWCGPCKAISPKVDQFSKTYS---DAEFIKVDVDElSEIAAE 66
                   69****************************8...99*****99983444444 PP

>> Thioredoxin_2  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.2   1.2e-08   2.1e-05       3     104 ..      16      94 ..      14      99 .. 0.77

  Alignments for each domain:
  == domain 1  score: 24.9 bits;  conditional E-value: 1.2e-08
  Thioredoxin_2   3 gngkpvlvvftdpdCpyCkklkkelkelddvtvrvllfplkpsfepkavaiwcakekkkafkdieenvelarkygvrgtPtiv.fldgkeivarlp 97 
                    +++k v+v+f +++C+ Ck++  ++++     ++     + +++e++ v+++   e              a + gv+++P+++ + +g+ ++a+++
     EPX72983.1  16 AQNKLVVVDFFATWCGPCKAISPKVDQF---SKT-----Y-SDAEFIKVDVDELSE-------------IAAEAGVHAMPSFFlYKNGQ-KIAEVV 88 
                    57999******************99999...333.....3.444666666666655.............57889*******88466676.99999* PP

  Thioredoxin_2  98 Gyvpaee 104
                    G+ pa +
     EPX72983.1  89 GANPA-K 94 
                    **876.4 PP

>> AhpC-TSA  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.1   2.2e-08   3.9e-05      23     100 ..      14      90 ..       2     102 .. 0.81

  Alignments for each domain:
  == domain 1  score: 23.5 bits;  conditional E-value: 2.2e-08
                 H..TTSEEEEEEESTST-CCHHHHHHHHHHCHHHCCCTTEEEEEEESSSCHHHHHHHHH-H.SSEEEE-TTSHHHHHTT- CS
    AhpC-TSA  23 y..kgkpvvlffypkdwcpvCttelpalaklyeefkergvevigvsvdspeshkkfiekeslnfpllsDeegkvakaygv 100
                 +  ++k vv+ f+++ wc +C++  p+  +  + +   ++e i v vd++ ++++ +  + ++   l+ + +k+a+  g+
  EPX72983.1  14 ViaQNKLVVVDFFAT-WCGPCKAISPKVDQFSKTYS--DAEFIKVDVDELSEIAAEAGVHAMPSFFLYKNGQKIAEVVGA 90 
                 35578**********.*******************9..8999********999998888887777777777777776665 PP

>> Redoxin  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.2   1.3e-07   0.00024      26      63 ..      16      52 ..       2      99 .. 0.74

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 1.3e-07
                HTTSEEEEEEESTTT-HHHHHTHHHHHTHHHHHHCSTT CS
     Redoxin 26 fkgkkvvvnfvpgafcPtCsaehpyleklaellkekgv 63
                 ++k vvv f+++ +c++C+a  p+++++++ +++  +
  EPX72983.1 16 AQNKLVVVDFFAT-WCGPCKAISPKVDQFSKTYSDAEF 52
                5677899999999.***************999877655 PP

>> Thioredoxin_9  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0   4.7e-07   0.00085      29     125 ..       6      99 ..       2     102 .. 0.82

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 4.7e-07
                    H---HHHHHT--S-EEEEEE--TT-HHHHHHHHHHHHHHHH-TTEEEEEE-HHHHHHHTTTTTT-SS--SSEEEEE-TT--EEEEEESS-HHHHH. CS
  Thioredoxin_9  29 seeteekiksiekklkilvltedwCgDaavnvPvlakiaelnpnievkillrdenlelmdqyltngaraiPtliildeegeelgvwgerPaevqel 124
                    s++++ k+   ++kl ++ + + wCg + ++ P +++++++  + e+  +  de  e+  +    g +a P +++++++ +  +v g  Pa+++++
     EPX72983.1   6 SKTEDFKAVIAQNKLVVVDFFATWCGPCKAISPKVDQFSKTYSDAEFIKVDVDELSEIAAE---AGVHAMPSFFLYKNGQKIAEVVGANPAKLEAA 98 
                    445555666677788888899*********************8888877777777777775...599*********9999999999****999876 PP

                    . CS
  Thioredoxin_9 125 v 125
                    +
     EPX72983.1  99 I 99 
                    5 PP

>> OST3_OST6  OST3 / OST6 family, transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.1   1.9e-06    0.0034      46     107 ..      30      83 ..       9     100 .. 0.89

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 1.9e-06
   OST3_OST6  46 CelCrefepefelvakswrkdekskskklfFakvdfdegkdvFqklglnsaPhlllfppkkg 107
                 C +C+ + p++++ +k +   e        F+kvd+de +++ ++ g+   P ++l++  ++
  EPX72983.1  30 CGPCKAISPKVDQFSKTYSDAE--------FIKVDVDELSEIAAEAGVHAMPSFFLYKNGQK 83 
                 9*****************9994........***************************98544 PP

>> Thioredoxin_7  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.2   6.6e-06     0.012      14      42 ..      15      43 ..       5      79 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 6.6e-06
                   HHHT--EEEEE--TT-HHHHHHHHHHHH- CS
  Thioredoxin_7 14 aergkpvlvffgaswcftCqalerdflsd 42
                    +++k v v+f a+wc++C+a+   + + 
     EPX72983.1 15 IAQNKLVVVDFFATWCGPCKAISPKVDQF 43
                   578999***************98777765 PP

>> TraF  F plasmid transfer operon protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   0.1   8.7e-06     0.016     129     210 ..      18      89 ..       2      93 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 8.7e-06
        TraF 129 keygLlfFyrgkcpyceaqapilqafadky.glevraVsvdgrplpelpnarvdkgqaarlgvkrtPalvlvdpksqkvvpva 210
                 ++   + F++  c+ c+a +p +++f ++y   e + V+vd+     +++         + gv+ +P ++l +  ++   +v+
  EPX72983.1  18 NKLVVVDFFATWCGPCKAISPKVDQFSKTYsDAEFIKVDVDELSE--IAA---------EAGVHAMPSFFLYKNGQKIAEVVG 89 
                 456677799*********************778888888887644..555.........99***********99966555666 PP

>> Glutaredoxin  Glutaredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   9.2e-05      0.16       6      51 ..      27      73 ..      19      84 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 9.2e-05
                  STSSHHHHHHHHHHHHTT.....GGEEEEEGCCSHHHHHHHHHHHTSSSSS CS
  Glutaredoxin  6 kptCpyCkkakrlLkelg.....vkfeeidvdkdeeireelkelsgvrtvP 51
                   ++C+ Ck++    +++      ++f  +dvd+ +ei +e     gv ++P
    EPX72983.1 27 ATWCGPCKAISPKVDQFSktysdAEFIKVDVDELSEIAAEA----GVHAMP 73
                  589***********999977756668888888888988886....555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       617  (0.0344135); expected 358.6 (0.02)
Passed bias filter:                      528  (0.0294495); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 722.56
//
Query:       EPX72984.1  [L=32]
Description: oligosaccharyltransferase subunit Ost4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.6e-12   45.9   0.1    3.6e-12   45.9   0.1    1.0  1  Ost4      Oligosaccaryltransferase


Domain annotation for each model (and alignments):
>> Ost4  Oligosaccaryltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.9   0.1     2e-16   3.6e-12       3      29 ..       2      28 ..       1      32 [] 0.94

  Alignments for each domain:
  == domain 1  score: 45.9 bits;  conditional E-value: 2e-16
                SHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        Ost4  3 sDnqLytLAnfLGsaamlLIVlYHfle 29
                sD+qL++++ ++G+++mlLI+lYH+l+
  EPX72984.1  2 SDTQLQNIVSTFGVSMMLLIILYHYLS 28
                9************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (32 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       406  (0.0226449); expected 358.6 (0.02)
Passed bias filter:                      234  (0.0130515); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.28s 00:00:00.69 Elapsed: 00:00:00.49
# Mc/sec: 195.44
//
Query:       EPX72985.1  [L=278]
Description: steroid dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.4e-09   35.9   9.0    6.4e-09   35.9   9.0    2.0  2  Steroid_dh  3-oxo-5-alpha-steroid 4-dehydrogenase


Domain annotation for each model (and alignments):
>> Steroid_dh  3-oxo-5-alpha-steroid 4-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.2      0.11     2e+03      95     120 ..      67      92 ..      65     110 .. 0.64
   2 !   35.9   9.0   3.6e-13   6.4e-09      17     150 .]     149     278 .]     133     278 .] 0.73

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.11
  Steroid_dh  95 lewigyalvtkslaalaFalftvlnl 120
                 + w +ya+ +  + +++++l + l +
  EPX72985.1  67 WFWHFYAFGFLLIVSYVYFLLSTLRQ 92 
                 45677777777667777777665544 PP

  == domain 2  score: 35.9 bits;  conditional E-value: 3.6e-13
  Steroid_dh  17 lnGllqarylsyyqpy...aedylkkdrlllgivlfvlgmliniksdiiLrelrkegetkykipr.gglFelvsapnyfgEilewigyalvtkslaala 111
                 ++ ++ a  ++        +e+y+  +r  +g++l+v+g +++  s+ +L+ ++k++++   +p+    F +++ ++yfgE++ + g+  ++  +  + 
  EPX72985.1 149 YSHTFLAIVIA----ClgnYEQYMS-WRQGMGLTLYVFGSVWQNASHEHLIAQKKQRSY---LPLqKSGFRWIAGAHYFGEVIIYTGFLCIINHWILWL 239
                 23233332333....1443888888.9************************99988764...6774789**********************99887666 PP

  Steroid_dh 112 FalftvlnltvraaahhkwykkkfekYpksRkiliPfvf 150
                    ++++ +t  a++  k ++k      +   il Pf++
  EPX72985.1 240 VYGWILVSMTNIATSYSKTFQKAKTTESRPQWILFPFLY 278
                 555667777777777666666666666666678888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       603  (0.0336327); expected 358.6 (0.02)
Passed bias filter:                      251  (0.0139997); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.31s 00:00:00.87 Elapsed: 00:00:00.52
# Mc/sec: 1618.72
//
Query:       EPX72986.1  [L=444]
Description: V-type ATPase V1 subunit H [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.7e-54  182.9   4.0      1e-53  182.7   2.1    2.0  2  V-ATPase_H_N  V-ATPase subunit H
    1.3e-45  154.3   1.6    1.8e-42  144.1   0.3    3.1  3  V-ATPase_H_C  V-ATPase subunit H
    2.1e-05   24.3   0.6      0.079   13.3   0.0    3.7  3  HEAT          HEAT repeat
     0.0085   16.5   0.0        2.1    8.8   0.0    2.9  2  HEAT_2        HEAT repeats
  ------ inclusion threshold ------
      0.011   15.8   0.0       0.12   12.4   0.0    2.9  3  Arm           Armadillo/beta-catenin-like repeat
      0.069   13.1   0.0       0.57   10.1   0.0    2.2  2  Mito_carr     Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> V-ATPase_H_N  V-ATPase subunit H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  182.7   2.1   3.4e-57     1e-53       5     315 .]      26     320 ..      23     320 .. 0.90
   2 ?   -1.8   0.0      0.48   1.4e+03      28     160 ..     363     382 ..     350     407 .. 0.62

  Alignments for each domain:
  == domain 1  score: 182.7 bits;  conditional E-value: 3.4e-57
  V-ATPase_H_N   5 elankirarkipWegyvrsqliseedlkliksldkakkeqraklldedgpqyvklllnLlsklskedtlqyiLvlidD.llsedksrvelflslakk 100
                   ++  + r+  ipW g++rs++++e++++li+s+  ++    + ++++d + y++l+l+L+s +++  +l+y  v  +D ll++ k+++ +f      
    EPX72986.1  26 SIVDNARSAAIPWHGFQRSGVLTEDEYELISSIVGKPIDVFKMIVESDVKLYTNLFLKLFSITTNPGILHYAFVKAADaLLNS-KDFSLFFIP---- 117
                   5667889*********************************98899*********************************55555.556655555.... PP

  V-ATPase_H_N 101 eeqdpwkpflkllnrqddfivlla...lrllakllvqgkkksnklvesaLnrllqlLssqlssstnevieiavrllqellrtkeyRelfveadgvst 194
                           f+k+l+++d ++++la     l+a++++ ++     +  +++  +l++Ls++++ss+n++  +a+++l+++l+ k++R +++ +  ++ 
    EPX72986.1 118 -------LFFKFLKENDTYFNNLAddeKLLFARVFALSNLYVACSCPKMFTVFLEYLSKLMKSSDNNLCLFAAQCLAAILSLKAHRYAVWAEGSCPS 207
                   .......78889999999999996333567788888888888887799*******************************************766666 PP

  V-ATPase_H_N 195 lis.ilrstvanstrvgiQlqYqvllclWlLsFekkiaeelvkkkelipllvdilrdsvKEKvtRvilatlrNllekaeksskelaavmvqvkllkl 290
                    ++ +l       t+++ Q+qY++l+c+WlL+Fe  i +e+++  +l++ +v+i+r+ +K Kv+R+ila++ Nll+ka+++   ++ +m+  ++ k+
    EPX72986.1 208 RLAeLL------RTASDSQVQYYSLFCFWLLTFESPISKEINQPIDLVKVMVQIARSDTKIKVYRLILAIFSNLLQKAPNE---NIFTMLIENVDKV 295
                   555488......9***************************97776**********************************88...************* PP

  V-ATPase_H_N 291 lenLeerkfsDeditedleyLkeeL 315
                   ++ L++rk+ De+i   ++y+ ++L
    EPX72986.1 296 VKVLQRRKWADEEILGYMDYILSTL 320
                   ********************98876 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.48
  V-ATPase_H_N  28 eedlkliksldkakkeqraklldedgpqyvklllnLlsklskedtlqyiLvlidDllsedksrvelflslakkeeqdpwkpflkllnrqddfivlla 124
                   +++++l+k+l+++ +++                                                                                
    EPX72986.1 363 SDNYALLKKLFQNLQNN-------------------------------------------------------------------------------- 379
                   34444444444444433................................................................................ PP

  V-ATPase_H_N 125 lrllakllvqgkkksnklvesaLnrllqlLssqlss 160
                                                     +s
    EPX72986.1 380 ---------------------------------DNS 382
                   .................................333 PP

>> V-ATPase_H_C  V-ATPase subunit H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.1   0.0     0.002       5.8      44     109 ..     164     229 ..     157     236 .. 0.86
   2 ?   -0.1   0.1      0.33     1e+03      48      76 ..     273     301 ..     240     321 .. 0.62
   3 !  144.1   0.3     6e-46   1.8e-42       2     117 .]     327     442 ..     326     442 .. 0.98

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.002
  V-ATPase_H_C  44 lkkLiklleeskdktvlavalnDigelvkllpegkkvleklkaKekimellehe.deevkyeALkav 109
                   l+ L kl+ +s+d++ +  a++ ++ +++l  +  +v+++ ++ +++ ell+++ d++v+y +L + 
    EPX72986.1 164 LEYLSKLM-KSSDNNLCLFAAQCLAAILSLKAHRYAVWAEGSCPSRLAELLRTAsDSQVQYYSLFCF 229
                   45678888.58889999999999***************************98655*********997 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.33
  V-ATPase_H_C  48 iklleeskdktvlavalnDigelvkllpe 76 
                    +ll++  ++++ ++++ ++ ++vk+l++
    EPX72986.1 273 SNLLQKAPNENIFTMLIENVDKVVKVLQR 301
                   23344444556666666666666666554 PP

  == domain 3  score: 144.1 bits;  conditional E-value: 6e-46
  V-ATPase_H_C   2 ltsfdeYlaElesgkLewspvHksekFWkenaekleeknfkllkkLiklleeskdktvlavalnDigelvkllpegkkvleklkaKekimellehed 98 
                   l++fd Y++E++sg+L+wsp H+se+FW+en++kl+++n++llkkL++ l++++++t+lav ++D+g +++++p+gk+vl k+++K++imel++h+d
    EPX72986.1 327 LSTFDFYKSEVNSGHLQWSPSHRSEQFWMENVTKLNSDNYALLKKLFQNLQNNDNSTSLAVTCHDLGAYITYYPKGKSVLVKYGMKQRIMELMSHPD 423
                   89************************************************988889***************************************** PP

  V-ATPase_H_C  99 eevkyeALkavqkllvqnw 117
                   +ev++eAL++vq+l+++ w
    EPX72986.1 424 PEVRFEALNTVQRLMTEVW 442
                   ***************9988 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.2    0.0032       9.7       2      29 ..     164     191 ..     163     192 .. 0.91
   2 ?   -1.4   0.0       1.3   3.9e+03       5      24 ..     209     229 ..     207     233 .. 0.83
   3 !   13.3   0.0   2.6e-05     0.079       5      28 ..     415     438 ..     413     441 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0032
                 HHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgalae 29 
                 l  l kl+++++ +    Aa++L+a+++
  EPX72986.1 164 LEYLSKLMKSSDNNLCLFAAQCLAAILS 191
                 788999*******************986 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1.3
                 HHHHH.T-SSHHHHHHHHHHH CS
        HEAT   5 llkll.sDpspeVReaAakaL 24 
                 l +ll + ++++V + ++ ++
  EPX72986.1 209 LAELLrTASDSQVQYYSLFCF 229
                 778888999999999999997 PP

  == domain 3  score: 13.3 bits;  conditional E-value: 2.6e-05
                 HHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAakaLgala 28 
                 +++l+s+p+peVR  A++++ +l+
  EPX72986.1 415 IMELMSHPDPEVRFEALNTVQRLM 438
                 899****************99987 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.016        47      33      78 ..     164     220 ..     143     227 .. 0.70
   2 !    8.8   0.0    0.0007       2.1      33      56 ..     412     435 ..     369     441 .. 0.64

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.016
      HEAT_2  33 lpaLvellededpavRraaaeaLgai...........gdpeal.paLkellddddddv 78 
                 l++L +l++++d +    aa+ L+ai           + + ++ + L+ell++ +d+ 
  EPX72986.1 164 LEYLSKLMKSSDNNLCLFAAQCLAAIlslkahryavwA-EGSCpSRLAELLRTASDSQ 220
                 688999999*******9999999988655443333320.3333244555555555544 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.0007
      HEAT_2  33 lpaLvellededpavRraaaeaLg 56 
                  + + el++++dp+vR +a ++  
  EPX72986.1 412 KQRIMELMSHPDPEVRFEALNTVQ 435
                 677899************998765 PP

>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.1       2.3     7e+03      17      28 ..     167     178 ..     164     186 .. 0.71
   2 ?   -3.0   0.0       2.9   8.5e+03      16      29 ..     208     222 ..     205     225 .. 0.74
   3 ?   12.4   0.0   4.1e-05      0.12       3      39 ..     401     437 ..     400     439 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 2.3
                 HHHHTTTSSHHH CS
         Arm  17 LvrLLssedeev 28 
                 L +L++s d ++
  EPX72986.1 167 LSKLMKSSDNNL 178
                 789999777655 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 2.9
                 HHHHHTT.TSSHHHH CS
         Arm  16 pLvrLLs.sedeevq 29 
                 +L +LL+   d +vq
  EPX72986.1 208 RLAELLRtASDSQVQ 222
                 688999976666666 PP

  == domain 3  score: 12.4 bits;  conditional E-value: 4.1e-05
                 HHHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHH CS
         Arm   3 enkdavieaGavppLvrLLssedeevqeeAawALsNL 39 
                 + k +++++G  ++ ++L+s++d+ev++eA+ +++ L
  EPX72986.1 401 KGKSVLVKYGMKQRIMELMSHPDPEVRFEALNTVQRL 437
                 56888999999999*****************998766 PP

>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.31   9.4e+02      18      39 ..      55      76 ..      53      96 .. 0.79
   2 ?   10.1   0.0   0.00019      0.57      22      57 ..     242     277 ..     237     288 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.31
                HHHHHHHHHHHHHHHHHHCCCS CS
   Mito_carr 18 vatlvttPldvvKtrlqtqkks 39
                ++++v  P+dv K+ + ++ k 
  EPX72986.1 55 ISSIVGKPIDVFKMIVESDVKL 76
                7899999****99988777665 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00019
                 HHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHH CS
   Mito_carr  22 vttPldvvKtrlqtqkksskksksaaildvlkkiyk 57 
                 + +P+d+vK+++q++++ +k + ++ il +++++++
  EPX72986.1 242 INQPIDLVKVMVQIARSDTKIKVYRLILAIFSNLLQ 277
                 679***************998887778888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (444 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       673  (0.037537); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 2962.58
//
Query:       EPX72987.1  [L=776]
Description: secretory pathway protein Sec39 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.1e-57  193.2  17.5    1.1e-56  192.7  17.5    1.1  1  Sec39           Secretory pathway protein Sec39
      8e-05   23.1   1.9    0.00017   22.0   0.2    2.4  2  Cullin_binding  Cullin binding


Domain annotation for each model (and alignments):
>> Sec39  Secretory pathway protein Sec39
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  192.7  17.5   1.3e-60   1.1e-56      27     734 ..      45     674 ..      33     686 .. 0.85

  Alignments for each domain:
  == domain 1  score: 192.7 bits;  conditional E-value: 1.3e-60
                 HH...HHHHHHHHS-TTS-G....GGGGHH-----------------------.---------GGGHH-..............-SHHHHHHHHHHHHHT CS
       Sec39  27 lskellLrilLtylPEtldpseYvkllkelasgseeeetdeeddvdlspveel.seeearkrvrklrllpLklpdapeeast.dlltsFLihRalriDe 123
                 l+ e  L++l+ +lPEt++p+ Y++++    ++ e  +      +d+++  +l s++  + r+r++ l +       ++ ++ +++ +F+   + +i e
  EPX72987.1  45 LTLENWLSLLVKFLPETTEPDVYIPYIDVENDQGEICN-----TLDVASTVKLpSDKLCQYRLRQMGLWE-------SSLPSiQNVPQFYSIFSRKIVE 131
                 6677899********************98755555554.....577777766615566788999999962.......3344557888998888889999 PP

                 T-TTTTHHHHHT-.....-HHHHHHHHHTHHHHHHHHHHTT--....--HHHHHHS-HHHHHHHH------------HHHHHTHHHHHHHH........ CS
       Sec39 124 etgllsellelvepfldrsealrtWlisvvlpLlrlnyeyypdeeealsLeefeslsdreavnllLskteeseenvgrdlrglvgPwlygknrrkrrkl 222
                 et+ +++++ l++   +  +++r+W  +  ++++rl++ +       ++L+e e+ s r++++l +     s en +  l+++++P++  ++++++   
  EPX72987.1 132 ETNQVQLAYLLMK-SSQAPSEIREWSSGRFEVFHRLSQFTSVP----VDLDEMEKASIRDVISLSFPIL--SVENCVAILSEVIFPFILSTESESEG-- 221
                 9999999988777.567789************99999766666....9********************9..99*****************9555433.. PP

                 ...........T-HHHHH............HHHSSTTT--HHHH......HHHT-------HHHHHHHHHHHHH...HHHH.TSTTHHHHHHHHHHHHT CS
       Sec39 223 sesakkesegWeevnewLlsqalk.swkvaveaveewdgpedvdLGgyeeeslseeeqqeleeryaraalaivYlvsetseealegaheilsrlaelld 320
                       ++++W +v+e Ll+  ++  +++ +e + +w   ed +                l+  + + al ++Y+++et++++l+  ++il+ + e l+
  EPX72987.1 222 ------SQNSWSYVWEKLLQLVKTdGLEILHELIIHWII-EDTK----------------LQLMFMKVALSSLYICNETTSTSLSLGKRILASIQEKLR 297
                 ......3368********988777688999999999965.4666................999************************************ PP

                 ...............................TS-SEEEETTEEEEHHHHHHHHHHHHT--SS....-H......HHHH.HH..HTS-HHHHHHHHHHHH CS
       Sec39 321 ldpppslssaasslppveldesslsstsrasllrndlleesnpLtapskeslsllealllsariltslghplsvkeaaeli..lledeeeQlaelrkll 417
                 l+     ++  ++l +v++++           + + +l+++n+Lt p++es+ ll+ +l  + il+++ + ++v ++       ++d  +Q++ l+k +
  EPX72987.1 298 LT-----TTPYDNLLKVPVEN-----------SIEFFLSNDNNLTNPTSESVTLLSRILDAIPILETA-NVFPVPNVRACLniSNSDTAAQESFLQKYI 379
                 66.....45566666677765...........45779999*************************998.6666655543222377788*********** PP

                 HHHTT-..SSHHHHHHHHHHTTT...........-TTS--SSSTTS-HHHHHHHHHHHHHHTT-HHHHHHH.........HHHTT-TTHHHHHHHHHHH CS
       Sec39 418 selskkgskkddkdwqklrnellwLrdwgaeeeessskgkgvfgklsreeieseiLkaLLsagefdlakelYeds.s.kplsseqvedlvlkaaleayD 514
                 s+   + +++d +dw+++ +  l   +w        ++++  f+k+++++i  ++Lk LLs+++f++++++ +d      + ++ ++d+ ++ + + + 
  EPX72987.1 380 SSSLGELKSTDYNDWNNVFSFTL---SW--------KSQSLFFNKIESNDISLIFLKLLLSTSNFNVLENM-KDRlAlPGIHPDILQDCMESNFYKNFR 466
                 **988889***********9886...56........46789******************************.66655555******************* PP

                 H-SS--TTSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTS-----------HHHHHHTT-THHHHHHHHHHSTTGGG-HHHHHHHHHHHH CS
       Sec39 515 nAsNgnrtrggmkkaddiLqafkktleksspelkrleaLlkathaLseYsLvlkqGvpfkPvsirvhsdplsLIskvLeqNpksYtklddlleigrnLv 613
                  As+ n++rg++  a+++L++f++ ++ +  + +rl++L++  + +++Y+  +++G+p++P +i +  +p +L++ ++ q+ +sY+++ddl+ ++ + +
  EPX72987.1 467 AASSMNKSRGKLNTAYKVLNVFSECISLTP-TRRRLNSLINTVDLIKQYHFLIEKGKPLSPTQIEENLNPDKLLDFIITQDDRSYQQVDDLMALVIETY 564
                 **********************99886665.5******************************************************************* PP

                 HH.--S........HHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHH......HHH-HHHHHHHHHHHHHHHHHHHH---TG-HHH...........HH CS
       Sec39 614 ea.glt.......ekksaerrilamcIeaALaedDFetAYsyvvnrLsteasekkaekkkedeeddisWraalqaGkYrsptpteigeaslnpeirhLe 704
                 +a g +       +  +++++++  c++aAL + D  +A ++v +rL        + ++ +    +++ ++++++Gk   p         ln+ +++ e
  EPX72987.1 565 KAcGKFeytnaitQLHQITEQVVNRCVDAALLKSDLIMAKQLVEDRLV-------TLAESSVGMRKTIYKTCFRIGK--TP---------LNDHLSR-E 644
                 **83335668888**********************************2.......12233445688999********..33.........2444444.7 PP

                 HHHHHHHHHHHHS-GGGHHHHHHHHHHHHH CS
       Sec39 705 qrmelLsqaLrlaPpeeleevlnaWrrcEe 734
                  r+e L +a++ aP+eel++v+n+W ++E 
  EPX72987.1 645 IRLEMLQLAIANAPKEELNDVVNYWTEFES 674
                 7*************************9996 PP

>> Cullin_binding  Cullin binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1      0.38   3.4e+03      78      97 ..     387     406 ..     362     439 .. 0.66
   2 !   22.0   0.2   1.9e-08   0.00017      18     110 ..     621     715 ..     602     721 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.38
  Cullin_binding  78 kaiskDtWnqlleFakkvke 97 
                     k+   + Wn+++ F+ + k+
      EPX72987.1 387 KSTDYNDWNNVFSFTLSWKS 406
                     44555567777666665544 PP

  == domain 2  score: 22.0 bits;  conditional E-value: 1.9e-08
  Cullin_binding  18 kfkkvYeftFelakeegqksldletaielwklllkekeatkkeelleqwieFleeek..kekkaiskDtWnqlleFakkvkededlskYdeegAW 110
                       k++Y+ +F+++k++ + +l+ e+ +e+++l +++ ++++ +++++ w+eF ++++  ++++ +  D +  l e ++  + +e+ ++Yd ++ W
      EPX72987.1 621 MRKTIYKTCFRIGKTPLNDHLSREIRLEMLQLAIANAPKEELNDVVNYWTEFESNKErnETESDLDVDAFPELNESINYEELQENEDEYDFDKEW 715
                     5799******************************999888899*********877765555678999999999999885444899999**99999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (776 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       657  (0.0366445); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.30s 00:00:00.95 Elapsed: 00:00:00.44
# Mc/sec: 5297.71
//
Query:       EPX72988.1  [L=762]
Description: DUF1212 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.5e-68  230.8  10.4      6e-64  215.7   2.2    2.3  2  ThrE       Putative threonine/serine exporter
      7e-10   39.1   8.0      7e-10   39.1   8.0    2.7  3  ThrE_2     Threonine/Serine exporter, ThrE
  ------ inclusion threshold ------
      0.079   12.6   0.5          2    8.0   0.2    2.7  2  CPP1-like  Protein CHAPERONE-LIKE PROTEIN OF POR1-like


Domain annotation for each model (and alignments):
>> ThrE  Putative threonine/serine exporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  215.7   2.2     1e-67     6e-64       2     240 ..     327     575 ..     326     576 .. 0.94
   2 !   19.7   1.3   7.6e-08   0.00045     111     197 ..     600     687 ..     592     695 .. 0.81

  Alignments for each domain:
  == domain 1  score: 215.7 bits;  conditional E-value: 1e-67
        ThrE   2 lilrlGeiLlesGaetyrvedtmkriaralgleevevfvtptsiivsvdeeeesittvrrv.rsrgvnleklsevnelsreiaageisleeaeerLdeI 99 
                 +il+l+++L+++Ga+++r+e++m+++a++l++ e +++++p ++i+s+ +++++++ +  v  +++v+l+kl+ v+++++ ++++ +s+eea + Ld+I
  EPX72988.1 327 YILKLCRALMTHGAPSHRLEEHMSSTAKVLEI-EGQFLYVPGCMIISFGDTNTHTSDMHIVrVNQTVDLGKLKLVHDVYKAVIHDLMSVEEAINGLDTI 424
                 79******************************.9**************545666666999989************************************ PP

        ThrE 100 erskpryprwlvvlaaglaaaafallf.ggdwidflvaflagllggllrlll.akrglnsfvleavaaflasllallavsl....glgln....pdaii 188
                  +s+p +++w+ v+ +g+a+a++ +++  g+wid++++f++gl++g l+ll+ +++ l++ +le+++++l+s+l+++++s+      ++n    ++a++
  EPX72988.1 425 LKSPPYFKTWILVVTYGFASAFILPIAfSGGWIDLPISFFLGLIIGTLQLLVaPRSPLYNSLLEVTGSILTSFLSRAFGSIfrdhASKSNpifcFAALA 523
                 ************************9988***********************9999*************************866641133367667**** PP

        ThrE 189 igsillLvPGlpltnavrDllsgdlvsGlaRlveailialaiafGivlalsl 240
                  g+i+l++PG+++++++++l+s+++v+G++R+++ai+++l++ fGi+++++l
  EPX72988.1 524 EGAIVLILPGYIVLCGSLELQSKNIVAGSVRMFYAIIYSLFLSFGIAIGAAL 575
                 *************************************************998 PP

  == domain 2  score: 19.7 bits;  conditional E-value: 7.6e-08
        ThrE 111 vvlaaglaaaafallfggdwidflvaflagllggllrlll..akrglnsfvleavaaflasllallavslglgln.pdaiiigsillLvP 197
                 ++l++ l+ +++ ++ ++++ + +v+++++++g+++++++  ++++ +  + +a+aaf++++l+ l  +lg  +  + a+++ +i + vP
  EPX72988.1 600 RILFVPLFTVCLLIVNQARPSQWPVSLFISCVGYVVNYFTtqKHFKNTAAIGNAIAAFVIGCLGNLYSRLG--QGvAFAAVLPAIFVQVP 687
                 6778888899999999************************5334445678899***********9999975..33246777777777666 PP

>> ThrE_2  Threonine/Serine exporter, ThrE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       1.3   7.9e+03      63      89 ..     343     369 ..     324     372 .. 0.70
   2 ?    1.1   6.7     0.067     4e+02      48     125 ..     485     575 ..     435     578 .. 0.64
   3 !   39.1   8.0   1.2e-13     7e-10       2     128 ..     601     747 ..     600     748 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.3
      ThrE_2  63 ellArriktPvtvflipgllplvPGla 89 
                 + l   +   ++v+ i g +  vPG  
  EPX72988.1 343 HRLEEHMSSTAKVLEIEGQFLYVPGCM 369
                 555555666778888888888999876 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.067
      ThrE_2  48 alasflaalaigllsellArrik......tPvtvflipg...llplvPGlaaYktvlslvqgn....leeavengiealliagalavGlvl 125
                  l  ++++++ ++ls+ ++ +++       P+++f+  +   ++ + PG  +    l+l ++n       +++ +i  l+  +++a+G++l
  EPX72988.1 485 SLLEVTGSILTSFLSRAFGSIFRdhasksNPIFCFAALAegaIVLILPGYIVLCGSLELQSKNivagSVRMFYAIIYSLFLSFGIAIGAAL 575
                 45556677777777777776654222222577777766455588899**********9999995555566667777777777777777765 PP

  == domain 3  score: 39.1 bits;  conditional E-value: 1.2e-13
      ThrE_2   2 vilafiaalgfavifnvpkrallvagllGavgwlvylllme..lgvsialasflaalaigllsellArriktPvtvflipgllplvPGlaaYktvlslv 98 
                 ++++ ++++++ ++++++  + +v+ ++ +vg++v+++ ++  ++   a+++++aa++ig l++l++r+ +  ++  + p+++  vP + a +   ++ 
  EPX72988.1 601 ILFVPLFTVCLLIVNQARPSQWPVSLFISCVGYVVNYFTTQkhFKNTAAIGNAIAAFVIGCLGNLYSRLGQGVAFAAVLPAIFVQVPSGLAAQGGVKFG 699
                 6789999*******************************998889999****************************************666666655554 PP

      ThrE_2  99 .........qgn..........leeavengiealliagalavGlvlvsl 128
                          q +           +  ++ gi++++ia++++vGl+++ l
  EPX72988.1 700 idlatqisnQ-SnstatdessfNSSSLSFGINMVQIAIGISVGLFASAL 747
                 3454444431.045566778889999******************99876 PP

>> CPP1-like  Protein CHAPERONE-LIKE PROTEIN OF POR1-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0     0.033     2e+02     144     172 ..     558     585 ..     542     594 .. 0.78
   2 ?    8.0   0.2   0.00034         2     104     166 ..     606     670 ..     596     689 .. 0.68

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.033
   CPP1-like 144 avlltlvgLvvGlllGsllasllqvdval 172
                 a++++l +L++G+++G++l +++ +++++
  EPX72988.1 558 AIIYSL-FLSFGIAIGAALYGWMDHHATS 585
                 566664.79*************9876544 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.00034
   CPP1-like 104 lvlavltlvapaes.vpalllalglgasi..yflnrKekklgravlltlvgLvvGlllGsllasll 166
                 l+ ++l++v++a   + ++ l ++++  +  yf ++K  k   a++ +++++v+G  lG+l + l 
  EPX72988.1 606 LFTVCLLIVNQARPsQWPVSLFISCVGYVvnYFTTQKHFKNTAAIGNAIAAFVIGC-LGNLYSRLG 670
                 44445555555555645555555555444349***********************8.677666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (762 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       735  (0.040995); expected 358.6 (0.02)
Passed bias filter:                      457  (0.0254894); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.29s 00:00:00.94 Elapsed: 00:00:00.45
# Mc/sec: 5084.86
//
Query:       EPX72989.1  [L=316]
Description: hypothetical protein SOCG_00747 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (316 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       719  (0.0401026); expected 358.6 (0.02)
Passed bias filter:                      504  (0.0281109); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 2207.73
//
Query:       EPX72990.1  [L=528]
Description: hypothetical protein SOCG_00748 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (528 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1045  (0.0582855); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 3532.47
//
Query:       EPX72991.1  [L=336]
Description: WD repeat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.2e-11   44.1   0.3     0.0011   19.8   0.0    4.7  5  WD40         WD domain, G-beta repeat
    1.2e-10   41.5   0.0     0.0022   18.2   0.0    3.8  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
     0.0031   17.4   0.1       0.13   12.1   0.0    2.5  3  eIF2A        Eukaryotic translation initiation factor eIF2A
     0.0049   16.7   0.0       0.64    9.9   0.0    2.8  2  BBS2_N       Ciliary BBSome complex subunit 2, N-terminal
  ------ inclusion threshold ------
      0.046   13.0   0.0       0.17   11.2   0.0    1.8  2  CPSF_A       CPSF A subunit region
      0.047   12.7   0.1       0.37    9.7   0.0    2.2  3  Ge1_WD40     WD40 region of Ge1, enhancer of mRNA-decapping p


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.25   7.5e+02      13      29 ..       5      21 ..       2      29 .. 0.83
   2 ?   -2.7   0.0       4.4   1.3e+04      14      26 ..     127     139 ..     118     139 .. 0.73
   3 !   19.8   0.0   3.6e-07    0.0011       7      34 ..     163     191 ..     158     193 .. 0.87
   4 !   16.2   0.0   4.9e-06     0.014      11      37 ..     213     239 ..     200     240 .. 0.85
   5 ?   -0.3   0.1       0.8   2.4e+03      18      34 ..     289     304 ..     249     307 .. 0.73

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.25
                EEEEEEETTSSEEEEEE CS
        WD40 13 vtslafspdgawlasGs 29
                v ++++++d+++l+ G+
  EPX72991.1  5 VLHCSWNQDQRFLSVGT 21
                57899********9886 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 4.4
                 EEEEEETTSSEEE CS
        WD40  14 tslafspdgawla 26 
                 + +afs++ +++a
  EPX72991.1 127 NKIAFSSNESFIA 139
                 4577999988875 PP

  == domain 3  score: 19.8 bits;  conditional E-value: 3.6e-07
                 EESS.SSEEEEEEETTSSEEEEEETTSEE CS
        WD40   7 ltGH.ssvtslafspdgawlasGsdDgtv 34 
                 l  H s+v+++ f+pdg+ +a++s +gtv
  EPX72991.1 163 LYCHsSPVRCIEFHPDGHVIATASSKGTV 191
                 568*788**************99879998 PP

  == domain 4  score: 16.2 bits;  conditional E-value: 4.9e-06
                 SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  11 ssvtslafspdgawlasGsdDgtvriW 37 
                  sv s+af+p  ++la++s++gt++i+
  EPX72991.1 213 ASVVSIAFHPKEPFLACASENGTIHIF 239
                 4689************99*******97 PP

  == domain 5  score: -0.3 bits;  conditional E-value: 0.8
                 EETTSSEEEEEETTSEE CS
        WD40  18 fspdgawlasGsdDgtv 34 
                  s +g+ ++++s +++v
  EPX72991.1 289 SSFSGKIVFCSS-KPHV 304
                 567788888777.8887 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.023        69      42      60 ..       6      24 ..       3      34 .. 0.83
   2 ?   -1.5   0.0       1.1   3.2e+03      43      79 ..     128     166 ..     103     170 .. 0.68
   3 !   18.2   0.0   7.4e-07    0.0022      37      75 ..     166     205 ..     129     210 .. 0.86
   4 !   16.1   0.0   3.5e-06     0.011      27      81 ..     201     255 ..     198     265 .. 0.76

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.023
  ANAPC4_WD40 42 rsLaWkpdgklLavaysdg 60
                  + +W++d ++L v+++ g
   EPX72991.1  6 LHCSWNQDQRFLSVGTETG 24
                 5679***********9988 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 1.1
  ANAPC4_WD40  43 sLaWkpdgklLavaysd..gevrlldaesgkvvhslsvk 79 
                  ++a++ +++++a    +  g+v l + e++  +  l ++
   EPX72991.1 128 KIAFSSNESFIAYNSPQvpGHVYLTSLETAMPITLLYCH 166
                  567777777777654432267777777777766666665 PP

  == domain 3  score: 18.2 bits;  conditional E-value: 7.4e-07
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdge.vrlldaesgkvvhs 75 
                  ++s vr+++++pdg+++a a s+g+ +r+++ ++g+ + +
   EPX72991.1 166 HSSPVRCIEFHPDGHVIATASSKGTvIRIMSTSTGEKILE 205
                  5689********************6379****99997765 PP

  == domain 4  score: 16.1 bits;  conditional E-value: 3.5e-06
  ANAPC4_WD40  27 qrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  +++ +l +     +v s+a++p++ +La a ++g++++++ +++ + ++ +  ++
   EPX72991.1 201 EKILELRRGYLPASVVSIAFHPKEPFLACASENGTIHIFKLSKQSISETNHSPDS 255
                  5666666667778999************************999887766554444 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       2.7     8e+03     149     159 ..       8      18 ..       6      30 .. 0.52
   2 !   12.1   0.0   4.4e-05      0.13      84     164 ..     106     188 ..      95     207 .. 0.80
   3 ?    2.7   0.0     0.034     1e+02     107     169 ..     219     278 ..     208     304 .. 0.79

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 2.7
                 EEE-TTSSEEE CS
       eIF2A 149 vewspdgryvl 159
                 + w++d r++ 
  EPX72991.1   8 CSWNQDQRFLS 18 
                 44544444432 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 4.4e-05
                 EEEEEECS.CEEEEEEEEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEE..E-TT--EEEE-TTSSEEEEEE-T CS
       eIF2A  84 kvslfdlk.vkviskleeqkrNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiaka..eaanatlvewspdgryvlTatta 164
                 +++++ lk +++i +l + + N i fs+++ +++     +++G++ +   ++   i+ +  +++    +e++pdg+ ++Ta++ 
  EPX72991.1 106 TIYVYALKnLNLINTLATISSNKIAFSSNESFIAYNS-PQVPGHVYLTSLETAMPITLLycHSSPVRCIEFHPDGHVIATASSK 188
                 578888855***********************99865.7899***998888666665541044445568************975 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.034
                 EE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-TT--EEEE-TTSSEEEEEE-TTT-SS CS
       eIF2A 107 ffspkgklvllaGfgnlaGeleiwdvkkkkkiakaeaanatlvewspdgryvlTattaprlrv 169
                  f+pk+ +++ a     +G++ i++ +k +  ++ +++++++   s+ ++++   +t p   v
  EPX72991.1 219 AFHPKEPFLACAS---ENGTIHIFKLSKQSISETNHSPDSSVSSSSNWSKFLKSNVTKPLEAV 278
                 5666666665553...4799*******999999999999999999999999999999886555 PP

>> BBS2_N  Ciliary BBSome complex subunit 2, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0      0.02        59      65      94 ..      11      40 ..       5      45 .. 0.82
   2 !    9.9   0.0   0.00022      0.64       4      49 ..     219     268 ..     216     328 .. 0.64

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.02
      BBS2_N 65 kqekdiLligtqtnllaYdveeNsdlFyke 94
                +q++ +L +gt+t l++Y+ +  +  F ke
  EPX72991.1 11 NQDQRFLSVGTETGLQIYQCDPFTLRFSKE 40
                567889************988777777776 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00022
      BBS2_N   4 kfdgshpclaaattagkvlihnphekeqklkserlsas....esevslLn 49 
                  f +++p la+a++ g + i++  +++ + ++++ ++s    ++  ++L+
  EPX72991.1 219 AFHPKEPFLACASENGTIHIFKLSKQSISETNHSPDSSvsssSNWSKFLK 268
                 5899******************7666655554443333433233344443 PP

>> CPSF_A  CPSF A subunit region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.33   9.9e+02     102     122 ..      98     117 ..      95     138 .. 0.76
   2 ?   11.2   0.0   5.6e-05      0.17     161     241 ..     199     299 ..     162     319 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.33
                 EEEEE-SSEEEEEEE-TTS-E CS
      CPSF_A 102 rllvgvgqkvrvydlgedktL 122
                 rl+v +  +++vy l++ + L
  EPX72991.1  98 RLVVVIKGTIYVYALKNLN-L 117
                 7899999999999999877.3 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 5.6e-05
                 SS--EEEEEEESS---EEEEEEE--SSSEEEEEETTSEEEEEE--TTSGGGTTTT.....................EEEEEEEEE-SS----E...EEE CS
      CPSF_A 161 enyklilfardtqkrwvtaaeflvdgedtvlvaDkfgnlfvlrydpeasessdgdp....................rleeraefhlgeivtslrkgslv 239
                  ++k+ ++ r + + +v++++f +++  ++++a ++g ++++++ ++   + +  p                     le   ef + +i+ s+ +g++v
  EPX72991.1 199 TGEKILELRRGYLPASVVSIAFHPKE-PFLACASENGTIHIFKLSKQSISETNHSPdssvssssnwskflksnvtkPLEAVKEFATAKIPESSFSGKIV 296
                 56778899999999*********666.6*****************887777777779999999999988888888888888888888888888888887 PP

                 E.. CS
      CPSF_A 240 p.g 241
                    
  EPX72991.1 297 FcS 299
                 752 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.1       1.5   4.4e+03      24      44 ..      99     118 ..      92     133 .. 0.54
   2 ?    5.4   0.0    0.0026       7.6     187     211 ..     167     191 ..     152     194 .. 0.84
   3 ?    9.7   0.0   0.00012      0.37      39      99 ..     183     245 ..     171     253 .. 0.79

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 1.5
    Ge1_WD40  24 Lvavhregkylayaikvkntg 44 
                 Lv v ++g +  ya+k  n  
  EPX72991.1  99 LVVV-IKGTIYVYALKNLNLI 118
                 3333.3355555666555544 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.0026
    Ge1_WD40 187 hsliveaafspdGtalatasedGev 211
                  s + +  f pdG ++atas+ G+v
  EPX72991.1 167 SSPVRCIEFHPDGHVIATASSKGTV 191
                 35788899**************987 PP

  == domain 3  score: 9.7 bits;  conditional E-value: 0.00012
    Ge1_WD40  39 kvkntgeglvrvvnketeeraL.l.kg.lkgevldlafahvsskillavdekgslfvykveeve 99 
                  ++++ ++++r+++++t e+ L l +g l ++v+ +af h ++  l++  e+g + ++k+++++
  EPX72991.1 183 ATASSKGTVIRIMSTSTGEKILeLrRGyLPASVVSIAF-HPKEPFLACASENGTIHIFKLSKQS 245
                 344556889**********9975424457899999999.89999**************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (336 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       644  (0.0359195); expected 358.6 (0.02)
Passed bias filter:                      492  (0.0274416); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.56u 0.29s 00:00:00.85 Elapsed: 00:00:00.48
# Mc/sec: 2084.39
//
Query:       EPX72992.1  [L=310]
Description: minor serine/threonine protein phosphatase Ppa1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.7e-36  126.7   1.8    2.4e-36  126.2   1.8    1.2  1  Metallophos  Calcineurin-like phosphoesterase


Domain annotation for each model (and alignments):
>> Metallophos  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.2   1.8   1.3e-40   2.4e-36       2     201 ..      52     243 ..      51     246 .. 0.92

  Alignments for each domain:
  == domain 1  score: 126.2 bits;  conditional E-value: 1.3e-40
                  EEEEEESBTBTTCCTHHHHHHHHHHHH.HHHTTESEEEEESTSSSSS..HHHHHHHHHHHHHHHHTSEEEEEC-TTS........CHHHHHHHHHHHH CS
  Metallophos   2 rilvigDlHlalgggqlddllkllddl.lreekpdlvllaGDlvdrg..dlekellellaalvkypipvylllGNHe........gfeeellnkygyl 88 
                  +++v+gD+H     gq++dl++l++   +++  ++l++  GD+vdrg  ++e+ +  l+a ++++p+++ +l+GNHe        gf++e+l+kyg+ 
   EPX72992.1  52 PVTVCGDIH-----GQFHDLQELFNIGgHSPDTNYLFM--GDYVDRGyhSVET-VSLLVALKIRFPHRITILRGNHEsrqitqvyGFYDECLRKYGN- 140
                  699******.....**********88864445789999..*******777777.7777**************************************9. PP

                  HHHHHHHEHHHCEEETSEEEEEETTEEEEEEEESE.CEEETHHHHHHHHHHHSCHHHHCC...HHHHHHHHHHTTCSEEEEEESSESSCSSSCSCCHH CS
  Metallophos  89 gifsepwrsdaevfnnlplaslgsgslkvlllhGg.spellvsldklgslnleleapepg...dewlkdlekrekadwvivlgHsplyrgsgylfgde 182
                     +++w+ +++ f++lpl +l+++  k++++hGg sp + ++ld ++ l++++e+p++g   d++++d        +   +g+   +rg+gy+fg++
   EPX72992.1 141 ---ANIWQCFTDLFDYLPLTALIED--KIFCMHGGlSPSI-DTLDHIRILDRIQEIPHEGpicDLLWSD--------PEDRPGWGISPRGAGYTFGPD 224
                  ...7799******************..********77777.****************************........88888888888********** PP

                  HHHHHHHHTTESEEEEESS CS
  Metallophos 183 aledllkkygvdlvisGHt 201
                   +e++  ++g+dl+ ++H+
   EPX72992.1 225 IAETFNHNNGLDLIARAHQ 243
                  ******************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       423  (0.0235931); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 2157.31
//
Query:       EPX72993.1  [L=233]
Description: phosphoric monoester hydrolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.4e-25   89.6   0.0    4.2e-25   89.2   0.0    1.1  1  HAD              haloacid dehalogenase-like hydrolase
    5.1e-09   35.9   0.1    2.1e-08   33.9   0.1    1.7  1  Put_Phosphatase  Putative Phosphatase
    6.2e-06   25.9   0.0    1.4e-05   24.7   0.0    1.6  1  UMPH-1           Pyrimidine 5'-nucleotidase (UMPH-1)
    7.5e-06   26.4   0.0     0.0011   19.3   0.0    2.8  3  Hydrolase        haloacid dehalogenase-like hydrolase
  ------ inclusion threshold ------
      0.012   15.3   0.0       0.03   14.0   0.0    1.8  1  TPR_11           TPR repeat
       0.17   11.8   0.2        0.7    9.8   0.1    2.0  2  TPR_1            Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> HAD  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.2   0.0   1.4e-28   4.2e-25       1     188 []       9     185 ..       9     185 .. 0.86

  Alignments for each domain:
  == domain 1  score: 89.2 bits;  conditional E-value: 1.4e-28
         HAD   1 alfDfDgTLldgdslelllrfllrrgaprlwralreklllalfrellrldraglaelleallaglseelaaelerfvaevirpklldpgalellaahra 99 
                 +++DfDgT++++ds+++l++  +++     ++a+r++l + +  ++  ++r+g+a++l++    + ee  + l++ v       ++dp++  +++++++
  EPX72993.1   9 VFSDFDGTITQQDSNDYLTD-NYGM-----GQAMRVQLNQEI-IQGKLSFRDGFAQMLNSVPLKY-EEALETLKKNV-------AIDPDFSSFYEWCKK 92 
                 799*****************.8888.....999999999999.7777888999999999855555.55566666666.......599************ PP

         HAD 100 aGdrvvvvSgglrplvepll.aelg.....adevlatelevddrltgelglegkpvrgegkvaalrewlaaegegidleevvayGDspsDlpllr 188
                 +G+r+v++S+g++p+++ ll + lg      +e++++++ v+++ t+ + ++++  +g++k   +r +++  +e+ +  ++v++GD++sDl +++
  EPX72993.1  93 EGVRLVILSSGMEPFIRSLLeQYLGkeeatKIEIVSNDINVHEDGTWNIVYHDDTHFGHDKSLTIRPYAQLPEEKRP--HMVYCGDGVSDLSAAK 185
                 ********************779998888888889998888877777788*****************7777777665..59***********996 PP

>> Put_Phosphatase  Putative Phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   0.1   7.1e-12   2.1e-08       4     187 ..      10     186 ..       7     208 .. 0.78

  Alignments for each domain:
  == domain 1  score: 33.9 bits;  conditional E-value: 7.1e-12
  Put_Phosphatase   4 vfDFDktiidedsdnwvvdelpate.lfeelretlrkglwnelmdrvlkelheqg.vseadikkvlrsiplspglvelikslakkkleldliii 95 
                        DFD ti ++ds++ ++d  ++ + +  +l++++ +    ++ d   + l++   + e+ +++  ++++++p + +  + +  kk+++ l+i+
       EPX72993.1  10 FSDFDGTITQQDSNDYLTDNYGMGQaMRVQLNQEIIQ-GKLSFRDGFAQMLNSVPlKYEEALETLKKNVAIDPDFSSFYEWC--KKEGVRLVIL 100
                      45******************99865155799999984.557888888888888774666778888899**************..4689****** PP

  Put_Phosphatase  96 SDaNsffieeileaagledlFse..iftNPaavdasGeltvlpyhehsCklcpsNlCKgkvleelvaeqaregveyerliYvGDganDlCpvlk 187
                      S   + fi ++le++  ++  ++  i +N  +v ++G+ ++  yh+ +         K   +  + +    e+ +  +++Y GDg  Dl + ++
       EPX72993.1 101 SSGMEPFIRSLLEQYLGKEEATKieIVSNDINVHEDGTWNIV-YHDDTHF----GHDKSLTIRPYAQL--PEE-KRPHMVYCGDGVSDLSAAKE 186
                      ************99865544443349**************97.5654322....22355566666554..444.4689**********988765 PP

>> UMPH-1  Pyrimidine 5'-nucleotidase (UMPH-1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.0   4.7e-09   1.4e-05      70     196 ..      59     185 ..      51     193 .. 0.83

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 4.7e-09
      UMPH-1  70 lieqklkkeeiaevvkeskialrdgveelfekleklnvPvlifsaGlgdvleevlrqa..nvvysnvkvvsnfldfdedGvlkgfkdklihvfnknesv 166
                 l   +lk+ee  e+ k+ ++a+  ++++++e  +k+ v ++i s+G+   + ++l q   +   + +++vsn ++  edG+ + + ++  h    +++ 
  EPX72993.1  59 LNSVPLKYEEALETLKK-NVAIDPDFSSFYEWCKKEGVRLVILSSGMEPFIRSLLEQYlgKEEATKIEIVSNDINVHEDGTWNIVYHDDTHF--GHDKS 154
                 55666777666666554.6778889999*****************************986677889*****************998887774..67888 PP

      UMPH-1 167 ldgteyfdql.kkrtnvillGDslGDlsmad 196
                 l+ ++y +   +kr +++  GD + Dls a+
  EPX72993.1 155 LTIRPYAQLPeEKRPHMVYCGDGVSDLSAAK 185
                 8989998876357889**********99876 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.1     0.032        95       4      16 ..       9      21 ..       8      50 .. 0.76
   2 !   19.3   0.0   3.7e-07    0.0011     107     208 ..      67     186 ..      56     188 .. 0.79
   3 ?   -1.3   0.0      0.72   2.2e+03      44      67 ..     196     219 ..     192     230 .. 0.76

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.032
                EEEESBTTTBCHH CS
                xxxxxxxxxxxxx RF
   Hydrolase  4 vvfDkdGTLttge 16
                v+ D+dGT+t+  
  EPX72993.1  9 VFSDFDGTITQQD 21
                688*******665 PP

  == domain 2  score: 19.3 bits;  conditional E-value: 3.7e-07
                 HHHHHHHHHTHHBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHH.TT......GGGESEEEEHHCES.......STTTSHHHHHHHHHHHT.... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xx......xxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxx.... RF
   Hydrolase 107 alavftiadplkvkpeaaeavasLkaagievvlltgdnpetaeraanq.lG......ddyfdaviasdiet.......vakpspegkvaaireLq.... 187
                 + a+ t++ +  + p+   + ++ k+ g+++v+l+++ + + +++++q lG       +++++ i++ +++              +k  +ir +     
  EPX72993.1  67 EEALETLKKNVAIDPDFSSFYEWCKKEGVRLVILSSGMEPFIRSLLEQyLGkeeatkIEIVSNDINVHEDGtwnivyhDDTHFGHDKSLTIRPYAqlpe 165
                 567777888888999999*********************************976554333344444444446666665444488999999999955777 PP

                 STGGGEEEEESSHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 188 gkpeevamVGDgvnDaaalaa 208
                 +k  +++  GDgv D++a+++
  EPX72993.1 166 EKRPHMVYCGDGVSDLSAAKE 186
                 77889*************996 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 0.72
                 HHHHHHHHHHHHHHHHHHHETTTE CS
                 xxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  44 kalvaaakarsgaltgfatfigrg 67 
                 + l+ ++k +  ++t+f+tf++  
  EPX72993.1 196 RDLITYCKRENVSYTEFETFAEIH 219
                 567788999999999999987655 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0     1e-05      0.03       9      33 ..      65      89 ..      65      90 .. 0.91

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1e-05
      TPR_11  9 kyeeAieaYkkAlkldPdnaeayyn 33
                kyeeA+e +kk +++dPd+ ++y +
  EPX72993.1 65 KYEEALETLKKNVAIDPDFSSFYEW 89
                8*****************9988865 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.1   0.00023       0.7      16      34 .]      65      83 ..      65      83 .. 0.96
   2 ?   -1.9   0.0       1.2   3.5e+03       6      20 ..     219     233 .]     216     233 .] 0.83

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00023
                -HHHHHHHHHHHHHHSTTH CS
       TPR_1 16 kydeAleyyekALelnPnn 34
                ky+eAle  +k + ++P++
  EPX72993.1 65 KYEEALETLKKNVAIDPDF 83
                8****************97 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.2
                 HHHHHHHHTT-HHHH CS
       TPR_1   6 nlGnayfklgkydeA 20 
                  ++++ fk ++ d+A
  EPX72993.1 219 HKALIEFKSENVDKA 233
                 578999999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       626  (0.0349155); expected 358.6 (0.02)
Passed bias filter:                      517  (0.028836); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.49u 0.33s 00:00:00.82 Elapsed: 00:00:00.47
# Mc/sec: 1479.41
//
Query:       EPX72994.1  [L=330]
Description: inner membrane protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-70  237.3  13.6    1.8e-70  236.8  13.6    1.2  1  She9_MDM33       She9 / Mdm33 family
  ------ inclusion threshold ------
      0.063   13.6   1.5       0.36   11.1   0.2    2.4  2  DUF5645          Domain of unknown function (DUF5645)
       0.18   12.7   0.7       0.48   11.3   0.7    1.6  1  Stap_Strp_toxin  Staphylococcal/Streptococcal toxin, OB-fold 
       0.18   11.6   1.0       0.38   10.5   1.0    1.4  1  PsbH             Photosystem II 10 kDa phosphoprotein
        2.4    8.6   5.6        2.4    8.6   0.2    3.0  3  DUF3837          Domain of unknown function (DUF3837)


Domain annotation for each model (and alignments):
>> She9_MDM33  She9 / Mdm33 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  236.8  13.6     5e-74   1.8e-70      11     191 ..      30     210 ..      24     220 .. 0.94

  Alignments for each domain:
  == domain 1  score: 236.8 bits;  conditional E-value: 5e-74
  She9_MDM33  11 slqetlltaskalndvtGYseieklkksieeleeeleeakeevreakeayeeaiekrsksqrevneLLqRkssWspedlerftelyrkdhanekeeeea 109
                 s++e++l+as++ln+ tGY++ie+lkk++  +e++l++ ++ +++a++ay ea+e+rs+sqrevneLLqR+ssWs++dlerft+lyr+d +n+++e+ +
  EPX72994.1  30 SFREAMLQASRRLNEFTGYTTIESLKKTVVLREQQLKDLRKVANDARRAYLEAVERRSSSQREVNELLQRRSSWSSTDLERFTKLYREDYSNKENESLL 128
                 567899********************************************************************************************* PP

  She9_MDM33 110 keklkeaeakeeelseeLtksiLtRYHEEqiWSDkiRraStwgtlvlmgvNvllfvvlqllvEPwkRrrLvesfeekvkeal 191
                 +e++k++e+k e++++ L++siL+RYHEEq+WSDkiR++Stwgt++lmg+Nvllf+v+ql++EP +Rrr v++  e v++  
  EPX72994.1 129 QENVKSTEEKIEDAQNGLVQSILSRYHEEQVWSDKIRQTSTWGTWGLMGINVLLFIVVQLILEPKRRRRWVQESMEFVEKEN 210
                 *********************************************************************9987655554443 PP

>> DUF5645  Domain of unknown function (DUF5645)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.2   9.9e-05      0.36       6      73 ..     104     174 ..     101     193 .. 0.83
   2 ?    0.4   0.1      0.21   7.5e+02      32      90 ..     209     266 ..     195     294 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 9.9e-05
     DUF5645   6 sdsEvdeLldlYekklpsevffylllkNqrkwdaqLeeiseleeaslslRk...kfythrrgdfrqtgtfv 73 
                 s +++++ ++lY + + ++ +  ll +N ++ ++++e+ +++  +s+  R    +++  + ++  ++gt+ 
  EPX72994.1 104 SSTDLERFTKLYREDYSNKENESLLQENVKSTEEKIEDAQNGLVQSILSRYheeQVWSDKIRQTSTWGTWG 174
                 778999********************************666666666556557899999999999999985 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.21
     DUF5645  32 kNqrkwdaqLeeiseleeaslslRkkfythrrgdfrqtgtfvslhededqsvsfftlqe 90 
                 +N+ k++ q++++s lee++    +k+  +  ++  +tg + s +   + s+ f++lq 
  EPX72994.1 209 ENKDKMELQIQKLSDLEEKISEDVAKYGSLNLENSSKTGSH-SQEPSSNSSLLFQSLQR 266
                 68889999999999888887777777777777777777765.45556666777777774 PP

>> Stap_Strp_toxin  Staphylococcal/Streptococcal toxin, OB-fold domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.7   0.00013      0.48       3      57 ..     115     163 ..     113     164 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00013
  Stap_Strp_toxin   3 Ystdrneyeeteiksidsltshnlkykkkdkelkvillvkseleskelaqffkgk 57 
                      Y   r +y+++e +   sl+ +n+k    ++e+++ +lv+s+l+ +  +q  ++k
       EPX72994.1 115 Y---REDYSNKENE---SLLQENVKSTEEKIEDAQNGLVQSILSRYHEEQVWSDK 163
                      4...5588888877...********************************999887 PP

>> PsbH  Photosystem II 10 kDa phosphoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   1.0   0.00011      0.38      22      42 ..     170     190 ..     165     191 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00011
        PsbH  22 WGttpvmavfilLflvfLvii 42 
                 WGt  +m++ +lLf+v  +i+
  EPX72994.1 170 WGTWGLMGINVLLFIVVQLIL 190
                 ****************99886 PP

>> DUF3837  Domain of unknown function (DUF3837)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.36   1.3e+03      39      64 ..      41      69 ..      34     107 .. 0.63
   2 ?    8.6   0.2   0.00066       2.4      49      97 ..     121     171 ..     108     173 .. 0.69
   3 ?    0.4   0.3      0.25   8.8e+02      36      65 ..     208     237 ..     200     244 .. 0.76

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.36
     DUF3837 39 glpeieekeeleelkekl...eeelkkvs 64
                 l+e++ ++++e+lk+ +   e++lk++ 
  EPX72994.1 41 RLNEFTGYTTIESLKKTVvlrEQQLKDLR 69
                56677777777777777744444555544 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00066
     DUF3837  49 leelkekleeelkkvsp..kdekekklikllkdYepdeevdeqmkellklG 97 
                  +e +  l+e++k ++   +d+++  + ++l++Y+ +++  ++++++ ++G
  EPX72994.1 121 NKENESLLQENVKSTEEkiEDAQNGLVQSILSRYHEEQVWSDKIRQTSTWG 171
                 34444445555544443114666777889********************99 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.25
     DUF3837  36 kllglpeieekeeleelkekleeelkkvsp 65 
                 k+ + ++  ++++l++l+ek++e+++k+ +
  EPX72994.1 208 KENKDKMELQIQKLSDLEEKISEDVAKYGS 237
                 555566677888999999999999988866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2103  (0.117296); expected 358.6 (0.02)
Passed bias filter:                      766  (0.0427241); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.58u 0.30s 00:00:00.87 Elapsed: 00:00:00.46
# Mc/sec: 2178.23
//
Query:       EPX72995.1  [L=907]
Description: zinc finger protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.4e-09   36.7   5.9      2e-07   31.0   0.1    3.5  4  Clathrin      Region in Clathrin and VPS
    2.6e-06   27.3   6.7      6e-06   26.2   6.7    1.7  1  zf-C3H2C3     Zinc-finger
  ------ inclusion threshold ------
       0.38   11.1   7.3       0.21   11.9   4.7    1.9  2  zf-rbx1       RING-H2 zinc finger domain
        2.5    8.0  10.2        2.3    8.1   7.9    2.2  2  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)


Domain annotation for each model (and alignments):
>> Clathrin  Region in Clathrin and VPS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.2   5.4e+03      94     118 ..     356     379 ..     353     396 .. 0.67
   2 !   31.0   0.1   4.5e-11     2e-07       7     133 ..     420     544 ..     414     547 .. 0.87
   3 !    6.6   0.2    0.0014       6.4      21      55 ..     646     681 ..     636     722 .. 0.79
   4 ?   -1.3   0.0       0.4   1.8e+03      98     130 ..     749     786 ..     741     818 .. 0.51

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.2
                 HTTXTHSSHSSXSSSSHCSCHHHHT CS
    Clathrin  94 kkinefkkaisllkklkdfddaiey 118
                 k+i+ +++ is+l k+ +fd ai  
  EPX72995.1 356 KRIDLNDE-ISMLSKKTMFDLAISL 379
                 56677777.7776666777777743 PP

  == domain 2  score: 31.0 bits;  conditional E-value: 4.5e-11
                 TS-CCCCHHHHHCTT-HHHHCHHHCCHHHCHTS--HHHHHHHHHHHHHTT-HHHHHHTTSS---S-TTHHHHHHHT-SSHHHHHHHHHTTXTHSSHSSX CS
    Clathrin   7 pidlsrvvklfeeaglleelleyLekvlkedskenpalqtallelyakyddpqeleeflkknnnydlekvaklcekadlyeeavilykkinefkkaisl 105
                 +++++ v   f +a++l++l  + e+++  ++ +n++l  +ll +y+++++++ + + +k    +  +++ ++c   +  eea+ l +++n+++++i++
  EPX72995.1 420 SVNIPVVCLDFLKAERLDQLVRFIEALMR-NDLANSDLKLLLLSCYVETKNLKGINKLIK-IGGFTFNQAFDICHRSGFLEEAKHLGSRFNNHERVIDV 516
                 6789999999******************5.55778***************9666666555.6667778999**************************** PP

                 SSSSHCSCHHHHTTTTTXXSHHHHHHHH CS
    Clathrin 106 lkklkdfddaieyaakvsnpelweklle 133
                 l ++k + + ++y  ++   +l++ ll+
  EPX72995.1 517 LLEEKKYSEILDYMYEIAPIRLLPLLLR 544
                 9999****99999999888888887776 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.0014
                 T-HHHHCHHHCCHHHCHTS.--HHHHHHHHHHHHHT CS
    Clathrin  21 glleelleyLekvlkedsk.enpalqtallelyaky 55 
                 ++  el+ +Le+vl   s+   ++++t l e+y+++
  EPX72995.1 646 NHNSELIRFLEAVLPYVSEeYKTHINTCLFEAYIRE 681
                 5788**********444333679***********98 PP

  == domain 4  score: -1.3 bits;  conditional E-value: 0.4
                 THSSHSSXSSSSHCSCHHH.....HTTTTTXXSHHHHH CS
    Clathrin  98 efkkaisllkklkdfddai.....eyaakvsnpelwek 130
                 ++ +a+++++ +++ + ++     +y+a  s  e w+k
  EPX72995.1 749 DVGRAMEMVHAHGEDQSELyimmlNYFASTSHLEPWAK 786
                 55555555555555444444444444444444333333 PP

>> zf-C3H2C3  Zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   6.7   1.3e-09     6e-06       1      31 [.     872     901 ..     872     905 .. 0.89

  Alignments for each domain:
  == domain 1  score: 26.2 bits;  conditional E-value: 1.3e-09
   zf-C3H2C3   1 CdnCglkLdypfvaysCkHlvHakCadeevC 31 
                 C  C + L+ p+v+++C+H++H  C ++e C
  EPX72995.1 872 CSACNTDLELPMVHFRCRHSYHLRCIEDE-C 901
                 99***********************8766.4 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       2.3     1e+04      24      37 ..     631     645 ..     612     647 .. 0.62
   2 ?   11.9   4.7   4.6e-05      0.21      11      42 ..     869     898 ..     864     905 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 2.3
     zf-rbx1  24 e.cpvvlGeCgHaFH 37 
                 + + +   +C H F 
  EPX72995.1 631 SyVAPNPQTCFHIFL 645
                 245555668999995 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 4.6e-05
     zf-rbx1  11 eeacieckapgdeecpvvlGeCgHaFHlhCis 42 
                 e++c  c+++ +   p+v  +C+H++Hl Ci+
  EPX72995.1 869 ESKCSACNTDLE--LPMVHFRCRHSYHLRCIE 898
                 467888877766..588888***********8 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       0.7   3.1e+03       4      10 ..     426     432 ..     425     435 .. 0.86
   2 ?    8.1   7.9   0.00052       2.3       1      28 [.     871     898 ..     871     904 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.7
  zf-C3HC4_2   4 iCldmlk 10 
                 +Cld+lk
  EPX72995.1 426 VCLDFLK 432
                 9****99 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.00052
  zf-C3HC4_2   1 kCpiCldmlkdpsvvtpCgHvfCqkCil 28 
                 kC  C   l+ p+v + C H+++  Ci 
  EPX72995.1 871 KCSACNTDLELPMVHFRCRHSYHLRCIE 898
                 7*************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (907 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       876  (0.0488594); expected 358.6 (0.02)
Passed bias filter:                      568  (0.0316805); expected 358.6 (0.02)
Passed Vit filter:                        82  (0.0045736); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.78u 0.27s 00:00:01.05 Elapsed: 00:00:00.48
# Mc/sec: 5659.84
//
Query:       EPX72996.1  [L=413]
Description: sphingosine-1-phosphate phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.8e-16   58.5   4.3      8e-16   58.0   2.9    2.0  2  PAP2      PAP2 superfamily


Domain annotation for each model (and alignments):
>> PAP2  PAP2 superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.0   2.9   4.4e-20     8e-16      10     131 ..     108     224 ..      99     229 .. 0.89
   2 ?   -2.4   0.0      0.21   3.7e+03       7      39 ..     309     341 ..     302     373 .. 0.54

  Alignments for each domain:
  == domain 1  score: 58.0 bits;  conditional E-value: 4.4e-20
        PAP2  10 alaalltsvlKdlvgrpRPfflaeetkldtqvstletseskeakesfPSgHsafafalalllalllrrkrkkig...lvllalillllavlvalsRlyl 105
                 a+ ++++++lKd++  pRP        + ++ ++++        ++fPS+H+++a++   + +++l ++++ i+     +l+ + ll+++ + l+Rly+
  EPX72996.1 108 AAGVYFSGILKDFLCLPRPMSPPLIRLTLSS-DAEF-------EYGFPSTHTTNAVSTGSYSIFMLISMKESISptcFYALLSLSLLYIFSIPLGRLYC 198
                 56678899***********999999999998.5544.......48*****************************99988888889999*********** PP

        PAP2 106 gvHflsDvlaGlliGialaalayrlv 131
                 g+H ++Dv +G liGi+l ++ ++++
  EPX72996.1 199 GMHGFMDVTVGSLIGICLSCIQWKYA 224
                 ******************99877665 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.21
        PAP2   7 lalalaalltsvlKdlvgrpRPfflaeetkldt 39 
                 +++++  +  s++K++   + P+++  + ++++
  EPX72996.1 309 FGVTMIFFWRSFAKQAALSLLPSIYKMFRDDQP 341
                 344444444444455555555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (413 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       626  (0.0349155); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 2794.31
//
Query:       EPX72997.1  [L=296]
Description: carrier with solute carrier repeats [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.5e-53  177.5   0.9    1.1e-17   63.7   0.0    3.1  3  Mito_carr        Mitochondrial carrier protein
     0.0045   16.2   0.1      0.099   11.8   0.0    2.5  3  Serine_protease  Gammaproteobacterial serine protease
  ------ inclusion threshold ------
      0.094   13.3   1.5       0.46   11.1   0.2    2.8  3  Rab5ip           Rab5-interacting protein (Rab5ip)


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.9   0.0   8.9e-18   5.3e-14       6      92 ..      15      95 ..      11     100 .. 0.88
   2 !   59.1   0.1     5e-20     3e-16       4      94 ..     105     190 ..     102     192 .. 0.95
   3 !   63.7   0.0   1.8e-21   1.1e-17       6      90 ..     212     291 ..     207     293 .. 0.94

  Alignments for each domain:
  == domain 1  score: 51.9 bits;  conditional E-value: 8.9e-18
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHH.HHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr  6 lkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiyk.eeGlrglyrGllpnllrvapasalkfvlyetlkrl 92
                +++l aG+l+g +++ + +Pld++Ktrlq +++           ++++++++ e G+++l++G lp++lr++  s+++f + + ++r+
  EPX72997.1 15 VSHLKAGALGGFLSSAALQPLDLLKTRLQQSQHLPLP-------QIIQNVVRkEGGITSLWKGTLPSILRSTTGSSCYFYVLNWMRRY 95
                67999************************99999866.......5677777626789************************9999987 PP

  == domain 2  score: 59.1 bits;  conditional E-value: 5e-20
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlll 94 
                 + ++++ +Ggl+ a+ +++ +P+ v+K+r  ++  s+++     i + +k+i+k+eG+ g++ G++++ +r ap ++l++ +ye  k+++ 
  EPX72997.1 105 KNTQNFWTGGLSRAIVGFAFMPVTVIKVRYESNYYSYTT-----IGSSIKSIWKKEGIPGFFHGFGVTAIRDAPHAGLYVYFYELSKETIH 190
                 67899*******************************999.....99*****************************************9875 PP

  == domain 3  score: 63.7 bits;  conditional E-value: 1.8e-21
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   6 lkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlk 90 
                   ++++G+++g++at++t+P+d++Ktr+q+q++ +k+     +l + k++y +eG+ g+  Gl  ++lr +++s +++++ye   
  EPX72997.1 212 SVNIASGMVSGIIATTITNPFDMLKTRVQLQPELYKN-----FLYCAKRVYINEGIYGFLDGLALRVLRKSVSSTITWSVYEWAM 291
                 67899*****************************999.....****************************************875 PP

>> Serine_protease  Gammaproteobacterial serine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0     0.071   4.2e+02     168     193 ..       9      34 ..       3      46 .. 0.74
   2 ?    1.2   0.0     0.027   1.6e+02      18      66 ..      29      82 ..      17     124 .. 0.73
   3 !   11.8   0.0   1.7e-05     0.099     176     213 ..     214     251 ..     204     266 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.071
  Serine_protease 168 kindelynkllaGalsGviAtvltti 193
                        +++++ +l aGal G + +    +
       EPX72997.1   9 EPKQKKVSHLKAGALGGFLSSAALQP 34 
                      5578899999****999887665555 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.027
  Serine_protease 18 saltsPfkalLtnlqkdgsv.lpsay......sgGlfralYrGflayalagskrra 66
                     sa  +P+  l t+lq+++ + lp+ +      ++G + +l++G+l+ ++  s  ++
       EPX72997.1 29 SAALQPLDLLKTRLQQSQHLpLPQ-IiqnvvrKEGGITSLWKGTLP-SILRSTTGS 82
                     566799999999999886431332.234445666778999999999.776666554 PP

  == domain 3  score: 11.8 bits;  conditional E-value: 1.7e-05
  Serine_protease 176 kllaGalsGviAtvlttifnsykDkkllaskvengrll 213
                      ++++G++sG+iAt++t +f  +k +  l+ ++ ++ l 
       EPX72997.1 214 NIASGMVSGIIATTITNPFDMLKTRVQLQPELYKNFLY 251
                      689******************99998888777666555 PP

>> Rab5ip  Rab5-interacting protein (Rab5ip)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.2   7.6e-05      0.46      36      76 ..      80     124 ..      63     129 .. 0.70
   2 ?   -0.0   0.1      0.23   1.4e+03      40      71 ..     127     160 ..     120     167 .. 0.55
   3 ?   -1.5   0.0      0.67     4e+03      10      21 ..     214     225 ..     209     232 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 7.6e-05
      Rab5ip  36 llvsllfyalkvkgkskk.....yfrgalkelwteglvnglagFvL 76 
                 +  s++fy+l+   + +       f++ ++++wt+gl ++++gF  
  EPX72997.1  80 TGSSCYFYVLNWMRRYNPqsnssSFKN-TQNFWTGGLSRAIVGFAF 124
                 455555554444433322223469999.88*************965 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.23
      Rab5ip  40 llfyalkvkgkskk..yfrgalkelwteglvngl 71 
                 +++++++ +++  +   +++++k++w+++ + g+
  EPX72997.1 127 VTVIKVRYESNYYSytTIGSSIKSIWKKEGIPGF 160
                 4444444443333344677889999976666544 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 0.67
      Rab5ip  10 alllGvvaGilg 21 
                  + +G+v Gi++
  EPX72997.1 214 NIASGMVSGIIA 225
                 567888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (296 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       425  (0.0237046); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2146.15
//
Query:       EPX72998.1  [L=346]
Description: L-asparaginase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      1e-36  126.5   0.1    1.4e-36  126.1   0.1    1.1  1  Asparaginase_2  Asparaginase


Domain annotation for each model (and alignments):
>> Asparaginase_2  Asparaginase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.1   0.1   7.9e-41   1.4e-36       3     249 ..       6     258 ..       4     267 .. 0.87

  Alignments for each domain:
  == domain 1  score: 126.1 bits;  conditional E-value: 7.9e-41
                     EEEEEEEESE-G-HHHHHHHHHCHHHHHHHHHHHHHTT--HHHHHHHHHHHHHCTCCCSSSTTSS-BTTS---EEEEEEETTTTEEEEEEEESSB CS
  Asparaginase_2   3 lvihGGAgsilktkereeavrkalkealeagykvLkeggsaldaVeaavrllEddplfnaGkGsvltedgeveldAsimdgktlraGaVagvkrv 97 
                     +++h GAg  +k   re+ +++a  +a +++   L++   ++ a +aav++lEd+p +naG+Gs+lt +geve +A +m+ +t  + ++ + +  
      EPX72998.1   6 VIVHAGAGLYSK--RREHLAKDACAKACTKAKIELAKTSDSIAAAVAAVKVLEDSPICNAGTGSNLTVNGEVECEAGLMESQTGMTASIGACRDY 98 
                     89******9988..888999999999999999999999999*9999************************************************* PP

                     S-HHHHHHHHHHHCS....-.....SEEEHHHHHHHHHHTT-----CGGG--HHHHHHHHHHHHCCCHS..B-S-BS-TTTTT---EEEEEE-TT CS
  Asparaginase_2  98 knpislArlvmekse....h.....vlLvgegAeefareqglelvdeesllteerlkelekakkekaekkeaknvsekelkaklgTvGaValDse 183
                     k p ++  ++++k +    h     +++v++g +ef++e+g+++ ++e+l+t+ ++k++ek+k+  +e          ++  +  TvGa+ +D +
      EPX72998.1  99 KYPSEICLRILNKRKlprsHgrippAMIVSHGVAEFLKEEGISKNPNEELITDGSRKQYEKWKQLIEEDG--------SVPLSQDTVGAICIDPS 185
                     ***********996433334444448************************************88776632........2235678********** PP

                     S-EEEEEEE--STTB-TTEE-STTSTTTSEEEETTT..EEEEE.....EE-HHHHCCTTHHHHHHHHHHTTT- CS
  Asparaginase_2 184 gnlAaaTSTgGltnklvGRvGDspiiGaGtYAdnkv..gAvsa.....TGkGeeiirellaadivalmeykgl 249
                     g++ + +S+gG+  k  GR+G s+i+G G + + ++   +vs+     TG+Ge+i ++ la + +  m ++ +
      EPX72998.1 186 GEFCVCCSSGGILLKSSGRIGSSAIPGHGFWLEREMneNGVSTfatcmTGTGEHISNTNLAFRCSNVMLHTEN 258
                     *******************************98654224555444445*************999988877554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (346 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       429  (0.0239277); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2516.68
//
Query:       EPX72999.1  [L=463]
Description: ATP-dependent RNA helicase Rrp3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-50  170.7   0.0    3.7e-50  170.1   0.0    1.3  1  DEAD        DEAD/DEAH box helicase
    2.6e-30  105.0   0.0    1.6e-29  102.5   0.0    2.3  3  Helicase_C  Helicase conserved C-terminal domain
    9.5e-09   35.5   0.0    5.7e-08   32.9   0.0    2.2  3  ResIII      Type III restriction enzyme, res subunit
    2.6e-05   24.0   0.0    0.00032   20.5   0.0    2.4  2  AAA_30      AAA domain
  ------ inclusion threshold ------
          1    9.8   3.7        2.7    8.4   3.7    1.7  1  S-antigen   S-antigen protein


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  170.1   0.0     1e-53   3.7e-50       1     176 []      68     235 ..      68     235 .. 0.97

  Alignments for each domain:
  == domain 1  score: 170.1 bits;  conditional E-value: 1e-53
                 -HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   1 tdiQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvd 99 
                 t+iQ+eaip++l+++dv++ a+TGsGKT+af++pv+q++++  + +   a++++PtreLa q+ ++++ ++  i++r ++i+gg +   q  +l+++++
  EPX72999.1  68 TPIQREAIPTALSKRDVIGLAQTGSGKTAAFALPVIQELWD--NPSPYYAVVLAPTRELAYQISEQFEALGGAIGVRSVVIVGGMDMVTQAVALSKKPH 164
                 89*************************************97..99999**********************************************999** PP

                 EEEEEHHHHHHHH.HCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHHHHH CS
                 xxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 100 ivvgtpgrlddll.stgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkdvkkl 176
                 i+v tpgrl+d+l +t+ ++l+++++l++DEadrlld++f++ i+ril+ +       +++r+++++SAT++++v+kl
  EPX72999.1 165 ILVCTPGRLMDHLeNTKGFSLRNLKYLIMDEADRLLDMDFGPIIDRILKVI-------PKERRTLLFSATMTSKVEKL 235
                 *************77888*********************************.......67889**********99986 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       2.9   1.1e+04      20      54 ..     116     154 ..     105     169 .. 0.57
   2 ?   -1.8   0.0       1.1   3.8e+03       9      31 ..     211     234 ..     206     254 .. 0.64
   3 !  102.5   0.0   4.5e-33   1.6e-29       2     111 .]     270     378 ..     269     378 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 2.9
                 EEEESSHHHHHH.HHHHHHHT.......TSTEEEESTTSTHHH CS
  Helicase_C  20 lifvntidrlek.vklllekk.......gikvavlhgelpqne 54 
                 ++ ++t++ +++  +     +       g++++v+ g +    
  EPX72999.1 116 VVLAPTRELAYQiSEQ----FealggaiGVRSVVIVGGMDMVT 154
                 5556666644433222....12223444677777766665544 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 1.1
                 HHHHTTTTSEEEEEESSHH.HHHH CS
  Helicase_C   9 llkleeeggkilifvntid.rlek 31 
                 +lk   +++++l+f+ t + ++ek
  EPX72999.1 211 ILKVIPKERRTLLFSATMTsKVEK 234
                 444457788999999988866654 PP

  == domain 3  score: 102.5 bits;  conditional E-value: 4.5e-33
                 HHHHHHHHHHHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHHH CS
  Helicase_C   2 kleallellkleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvtsy 100
                 k  +l++l+ +e  g++++if++t+ + +++ +ll++ g+++++lhg+l+q++r+ +l++f++g++ +++atdva+rG+dip v++V+n+d+p++ + y
  EPX72999.1 270 KDTYLVYLI-NELAGNTVIIFARTVHDTQRLAILLRSLGFSAIPLHGQLTQSNRLGALNKFKSGTRSIMVATDVAARGLDIPLVDVVVNYDIPTDSKAY 367
                 567888887.999*************887789999999************************************************************* PP

                 HHHHTTSSSTT CS
  Helicase_C 101 iqriGRtgRag 111
                 ++r+GRt+Rag
  EPX72999.1 368 VHRVGRTARAG 378
                 *********97 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.43   1.5e+03      87     146 ..      10      64 ..       2      85 .. 0.65
   2 !   32.9   0.0   1.6e-11   5.7e-08      31     169 ..      88     228 ..      64     230 .. 0.80
   3 ?   -2.5   0.2       1.2   4.5e+03       2      31 ..     406     434 ..     404     447 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.43
                 EEESSS-B--.......-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS CS
      ResIII  87 kkvsgdkkkakekdstnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlga 146
                 k+v+g++ k+     ++ k  v++++s  ++s+ e+e++++  +++f  +++D + +lg+
  EPX72999.1  10 KSVNGKGVKN-----EDFKEEVENVSSSGSNSSPENENEKDETPKTFRDLLCDACEKLGY 64 
                 4444444444.....566666777777777777777777777777887788887766655 PP

  == domain 2  score: 32.9 bits;  conditional E-value: 1.6e-11
                 ESTTSTHHHHH.HHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--........-SEEEEEHHHHHHTH........H CS
      ResIII  31 maTGtGKTlva.aklierllkkgkeekflflvprkslleqtleefkkflseaykeigkkvsgdkkka.kekdstnkkilvttiqsldadseeeeeesee 127
                 + TG+GKT    + +i++l+ + +   +++l+p+++l  q  e+f+ +      +   +v g          s++ +ilv t  +l  ++    e+++ 
  EPX72999.1  88 AQTGSGKTAAFaLPVIQELWDNPSPYYAVVLAPTRELAYQISEQFEALGGAIGVRSVVIVGGMDMVTqAVALSKKPHILVCTPGRLMDHL----ENTKG 182
                 57******998799********9999*********************99987655333333333333455678999**************....78888 PP

                 HHTTT-SEEEEETGGGTTS.T...TTHHHHHT-.--SEEEEEESS- CS
      ResIII 128 llrdrfdviiiDEaHrlgakk...swreilekf.keavllglTATp 169
                 ++  + +++i+DEa rl +++    + +il+ + ke   l ++AT+
  EPX72999.1 183 FSLRNLKYLIMDEADRLLDMDfgpIIDRILKVIpKERRTLLFSATM 228
                 8888999************95555999999999667999******7 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 1.2
                 -EE-HHHHHHHHHHT......TTSEEEEEE CS
      ResIII   2 lelreyQeeaienlleklkskrdkrglikm 31 
                 ++ +e+Q++a+  l e ++ + ++++ i+m
  EPX72999.1 406 MQEYEHQKDAVFLLSERVD-EAQREAAIQM 434
                 6677888888888877777.6666666665 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   8.9e-08   0.00032       6      68 ..      71     134 ..      67     216 .. 0.70
   2 ?    0.5   0.0      0.12   4.2e+02      44      82 ..     280     325 ..     273     353 .. 0.75

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 8.9e-08
      AAA_30   6 QaaavealltsgdrvavltGpAGtGKt..talkalreaweaa.ggrviglAptgkaAkvLaeelgi 68 
                 Q++a+ ++l+++d  ++  +  G+GKt  +al +++e+w++   +  ++lApt + A +++e++++
  EPX72999.1  71 QREAIPTALSKRD--VIGLAQTGSGKTaaFALPVIQELWDNPsPYYAVVLAPTRELAYQISEQFEA 134
                 9***********9..899999******33457789******988*****************86543 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.12
      AAA_30  44 aa.ggrviglAptgkaAkvLa...eelgieastiakllkrlk...g 82 
                 +  g +vi++A t    ++La   ++lg+ a  ++  l++ +   +
  EPX72999.1 280 ELaGNTVIIFARTVHDTQRLAillRSLGFSAIPLHGQLTQSNrlgA 325
                 444999*********9999997778999999988888776665651 PP

>> S-antigen  S-antigen protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   3.7   0.00076       2.7      49      82 ..      11      45 ..       5      51 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00076
   S-antigen 49 kkngkgqkyedleee.enddeedsnseesnndeen 82
                  ngkg k ed++ee en     sns+  n++e++
  EPX72999.1 11 SVNGKGVKNEDFKEEvENVSSSGSNSSPENENEKD 45
                469***********999999999998766655543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (463 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       876  (0.0488594); expected 358.6 (0.02)
Passed bias filter:                      521  (0.0290591); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 3322.71
//
Query:       EPX73000.1  [L=333]
Description: GPI-phospholipase A2 activity regulator [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.3e-93  311.5  13.0    6.6e-93  311.1  13.0    1.1  1  Per1          Per1-like family
  ------ inclusion threshold ------
       0.71    9.0   9.0        1.2    8.2   9.0    1.3  1  BPD_transp_2  Branched-chain amino acid transport system / pe


Domain annotation for each model (and alignments):
>> Per1  Per1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  311.1  13.0   7.4e-97   6.6e-93       1     253 [.      58     313 ..      58     315 .. 0.95

  Alignments for each domain:
  == domain 1  score: 311.1 bits;  conditional E-value: 7.4e-97
        Per1   1 plllrlllwdCesdCkYqCqheiteerkkegeevvqFhGKWpflrllgiqEpasvlfSllNllvhlkglkklrkeipkssplkkvylvyalvslnawvw 99 
                 p++lrl+ wdC sdC+Y+Cq   ++ ++ +g + +q++GKW f+r++giqE++svlfSl Nl+vh++g++++r+ ip+s++ k+++l +al+++nawvw
  EPX73000.1  58 PWYLRLFFWDCGSDCRYECQIDAEHYFAVNGIPSQQYFGKWYFIRIFGIQEFFSVLFSLFNLIVHYNGYQRMRRCIPDSHHSKSLCLKWALIGMNAWVW 156
                 89************************************************************************************************* PP

        Per1 100 SaiFHtrDveltEklDYfsAgavvlsglylavvrlfr..larekkrvkllltalllalyllHvlyLllvrfdYtYnmaanvvvgllqnllwlllslk.t 195
                 S++FHtrD+++tEklDYfsAga+vl+gly+++v +f+  l+r  + ++++l al+l+++++Hv+yL++++fdY+Ynm+an+ vgll+n+lw+++s++  
  EPX73000.1 157 SSVFHTRDTPFTEKLDYFSAGAFVLFGLYTSLVLMFKldLKRGGRIATTILGALFLIAFIAHVSYLSFYTFDYGYNMKANLSVGLLSNILWYYYSWShR 255
                 ************************************94444444555599**********************************************833 PP

        Per1 196 lakklvslklillvlllllamllEllDFppllrllDAhalwhlaTipltvlwydflvk 253
                 ++  +++ +++l v++l+l+++lEl+DF p+ +l+DAhalwhlaT+p+t++ y f++k
  EPX73000.1 256 NIGLSWTKVPALSVTALMLSASLELFDFSPIANLVDAHALWHLATVPITYYIYGFVIK 313
                 34588999***********************************************987 PP

>> BPD_transp_2  Branched-chain amino acid transport system / permease component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   9.0   0.00014       1.2      31     146 ..     174     305 ..     173     316 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00014
  BPD_transp_2  31 lghggfmalGayvaalllalllsl....lllallvallvgaavglllgllvlrlkvdeliitllllsvlvgltlllltgitsgvkgqssvkellgfa 123
                   +++g+f+++G y++++l+  l+      +++++l al + a+++ + +l+   + + + + + l + +l +++ +++ +  + +  + +++++l ++
    EPX73000.1 174 FSAGAFVLFGLYTSLVLMFKLDLKrggrIATTILGALFLIAFIAHVSYLSFYTFDYGYNMKANLSVGLLSNILWYYYSWSHRNIGLSWTKVPALSVT 270
                   89********************99***********************************99999999999999999999999999999999999999 PP

  BPD_transp_2 124 gallsflsaviv............llalllvlavl 146
                     +ls + + +             l+ l+ v + +
    EPX73000.1 271 ALMLSASLELFDfspianlvdahaLWHLATVPITY 305
                   99888888777777777888888744443333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (333 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       690  (0.0384851); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2457.98
//
Query:       EPX73001.1  [L=108]
Description: hypothetical protein SOCG_00759 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1179  (0.0657594); expected 358.6 (0.02)
Passed bias filter:                      620  (0.0345808); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 811.87
//
Query:       EPX73002.1  [L=155]
Description: transcription factor TFIID complex subunit Taf3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      5e-18   64.9   0.2    7.8e-18   64.3   0.2    1.3  1  Bromo_TP     Bromodomain associated
  ------ inclusion threshold ------
       0.16   12.0   0.0       0.38   10.8   0.0    1.5  2  TFIID-31kDa  Transcription initiation factor IID, 31kD subuni


Domain annotation for each model (and alignments):
>> Bromo_TP  Bromodomain associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.3   0.2   8.7e-22   7.8e-18       3      73 ..       9      79 ..       7      83 .. 0.96

  Alignments for each domain:
  == domain 1  score: 64.3 bits;  conditional E-value: 8.7e-22
                HHHHHHHHHHHHHHHHHT-SEE-HHHHHHHHHHHHHHHHHHHHHHHHHHTTSS-SS--HHHHHHHHHHTT- CS
    Bromo_TP  3 larsllkvvvsqileeaGfdsaeesaLEtLteiaqkYirelgeqaksfaehagRseptlkDvvltLqelgi 73
                +++ l++v++sq+l++aG d+++ s+L+++t+i+ +Yi+ l+e++++ ae+ ++  ++l+D++l+L+e+g+
  EPX73002.1  9 IYFCLMRVFCSQTLRAAGLDRTKLSLLDSFTDIMIRYIQLLSETTMAEAELSRKKDCDLQDFRLALEEVGL 79
                57889*****************************************************************8 PP

>> TFIID-31kDa  Transcription initiation factor IID, 31kD subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   4.2e-05      0.38      14      69 ..      21      76 ..      16      94 .. 0.81
   2 ?   -2.2   0.0      0.47   4.2e+03      76      90 ..     114     128 ..     104     136 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 4.2e-05
  TFIID-31kDa 14 iLaslgvteyeerVvlqLldfayrytssvLedAkvlaehakkkevslddvrlAiqs 69
                  L++ g++  +   ++ + d++ ry++ + e  ++ ae ++kk+ +l+d rlA+++
   EPX73002.1 21 TLRAAGLDRTKLSLLDSFTDIMIRYIQLLSETTMAEAELSRKKDCDLQDFRLALEE 76
                 57788888888899999********9876666667777778888*********976 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.47
  TFIID-31kDa  76 kepppkelLlelAae 90 
                  +++ pk++L++l ++
   EPX73002.1 114 TQTKPKDWLTNLVQK 128
                  456788998888766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       455  (0.0253779); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 1175.89
//
Query:       EPX73003.1  [L=301]
Description: SNARE Tlg2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-17   63.6   0.6    1.3e-17   63.6   0.6    2.6  3  SNARE           SNARE domain
  ------ inclusion threshold ------
      0.065   13.4  13.1       0.11   12.7   3.2    3.2  4  Cor1            Cor1/Xlr/Xmr conserved region
       0.28   11.6   0.1       0.28   11.6   0.1    2.3  3  DUF5383         Family of unknown function (DUF5383)
        0.8   10.3   8.3       0.83   10.3   1.6    2.9  2  ING             Inhibitor of growth proteins N-terminal histo
          1    9.3   4.0        5.7    6.9   0.7    2.9  3  DASH_Ask1       DASH complex subunit Ask1


Domain annotation for each model (and alignments):
>> SNARE  SNARE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.1      0.52   1.9e+03       4      17 ..      63      76 ..      61      79 .. 0.84
   2 ?   -2.2   0.1       1.2   4.4e+03       7      18 ..     177     188 ..     176     198 .. 0.68
   3 !   63.6   0.6   3.5e-21   1.3e-17       2      53 .]     243     294 ..     242     294 .. 0.98

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.52
                HHHHHHHHHHHHHH CS
       SNARE  4 DrIdtnVenaqsnv 17
                ++Id+  +n++ n+
  EPX73003.1 63 QDIDSLLQNTHRNI 76
                58999999999887 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1.2
                 HHHHHHHHHHHH CS
       SNARE   7 dtnVenaqsnve 18 
                 d++ e+++s+v 
  EPX73003.1 177 DAKLEDTVSDVA 188
                 678889998886 PP

  == domain 3  score: 63.6 bits;  conditional E-value: 3.5e-21
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTXXXXXXXXXXXXXXXXXXXX CS
       SNARE   2 mvDrIdtnVenaqsnveraqkeLkkavkyqksnRklkciillilviillvvl 53 
                 +vDrId nVe++q+++++a keL ka+ +q+++++l ++++lil+i++l+v+
  EPX73003.1 243 LVDRIDFNVEQTQVHAKSAEKELTKAEGHQRNTGRLRFMCFLILIIVVLIVI 294
                 79************************************************96 PP

>> Cor1  Cor1/Xlr/Xmr conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.54   1.9e+03      94     108 ..      14      28 ..      11      57 .. 0.48
   2 ?   12.7   3.2     3e-05      0.11      20      83 ..      60     123 ..      49     138 .. 0.92
   3 ?    6.4   0.2    0.0027       9.8      70     122 ..     143     194 ..     137     202 .. 0.82
   4 ?   -3.4   0.0         3   1.1e+04      56      78 ..     214     236 ..     210     241 .. 0.70

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.54
        Cor1  94 kqlydqFlksledLe 108
                 +q y  + + le+L+
  EPX73003.1  14 RQSYAHHGQRLESLK 28 
                 444444444444442 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 3e-05
        Cor1  20 ssnekieqvwktqqeerqklkeeysqqfltlfqqwetdvqkvkeqeeklsnlfqqqqkllqqar 83 
                 ++++ i++++++ +++ q l+++y + +l  f++ ++  +++++ +  ++n fq   ++lq+++
  EPX73003.1  60 TIEQDIDSLLQNTHRNIQLLNKQYAKHVLPSFSDKTEQENEIQRLTIDITNDFQRCHRILQNTK 123
                 6899*******************************************************99986 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.0027
        Cor1  70 nlfqqqqkllqqarvvqeqrlkeikqlydqFlksledLekehekllsdeqsel 122
                 nl    q   +++r  q++ lk+++ l+ +F  s  +Le++ +++  + qs +
  EPX73003.1 143 NLAGRIQTESSHFRKKQSNYLKKLRGLNSDFSSSDAKLEDTVSDVAIS-QSTI 194
                 5555667778899***************************99997776.6655 PP

  == domain 4  score: -3.4 bits;  conditional E-value: 3
        Cor1  56 tdvqkvkeqeeklsnlfqqqqkl 78 
                   v k+ e   +l+++fq+ q l
  EPX73003.1 214 RAVAKIAEGILELAQMFQDLQGL 236
                 55677777777888888887766 PP

>> DUF5383  Family of unknown function (DUF5383)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1       2.4   8.8e+03      62      64 ..      98     100 ..      80     128 .. 0.60
   2 ?   -1.3   0.7      0.75   2.7e+03      39      91 ..     155     206 ..     148     221 .. 0.60
   3 ?   11.6   0.1   7.8e-05      0.28      67     114 ..     249     296 ..     225     301 .] 0.65

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 2.4
     DUF5383  62 snt 64 
                 +n 
  EPX73003.1  98 ENE 100
                 222 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.75
     DUF5383  39 FtkkekeeaeelkesLfassekesntiaakakelgLfseekesvkqsateqes 91 
                 F kk+ ++ ++l   L ++ +  +   + + + + ++++  +++ +  +e e+
  EPX73003.1 155 FRKKQSNYLKKLRG-LNSDFSSSDAKLEDTVSDVAISQSTIQQAALMEEEGED 206
                 66666666666555.66666666666666666666666555555544444444 PP

  == domain 3  score: 11.6 bits;  conditional E-value: 7.8e-05
     DUF5383  67 akakelgLfseekesvkqsateqeseeksnlLpillillivllivvll 114
                  + ++ ++  +++e   ++a+ ++ ++     + +lil+iv+liv+l+
  EPX73003.1 249 FNVEQTQVHAKSAEKELTKAEGHQRNTGRLRFMCFLILIIVVLIVILI 296
                 555566666566666556666666666666666666666666666665 PP

>> ING  Inhibitor of growth proteins N-terminal histone-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   1.6   0.00023      0.83      25      74 ..      64     120 ..      60     129 .. 0.85
   2 ?    2.9   0.5     0.046   1.6e+02      21      69 ..     171     226 ..     139     254 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00023
                 HHHHHHHHHHHHH...HHHHHHHH....TS..S-HHHHHHHHHHHHHHHHHHHHHHH CS
         ING  25 eiDakvqellkei...dskiekfl....kngslqknekeeelsriqeelkeaqelld 74 
                 +iD  +q++ ++i   ++++ k +    +++++q+ne ++ + +i +++++++++l+
  EPX73003.1  64 DIDSLLQNTHRNIqllNKQYAKHVlpsfSDKTEQENEIQRLTIDITNDFQRCHRILQ 120
                 79**********9888777777778*99888888888888888*********99865 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.046
                 HHHHHHHHHHHHHHHHH...HHHHHHHH....TS..S-HHHHHHHHHHHHHHHHHH CS
         ING  21 telreiDakvqellkei...dskiekfl....kngslqknekeeelsriqeelkea 69 
                 +     Dak+++++ ++   +s i++      + +++   + e+++++i e + e+
  EPX73003.1 171 SDFSSSDAKLEDTVSDVaisQSTIQQAAlmeeEGEDERAVQHERAVAKIAEGILEL 226
                 45566799999999999887778888777776333344444444445555554444 PP

>> DASH_Ask1  DASH complex subunit Ask1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.7    0.0016       5.7       4      34 ..      61      91 ..      59     102 .. 0.90
   2 ?    2.1   0.4      0.05   1.8e+02      13      28 ..     106     121 ..      93     122 .. 0.74
   3 ?   -3.2   0.0       2.3   8.1e+03      37      56 ..     212     231 ..     211     232 .. 0.72

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0016
   DASH_Ask1  4 ldqeitltLqeIDanlsrcfriitkkilPav 34
                ++q+i  +Lq+  +n++  ++   k++lP  
  EPX73003.1 61 IEQDIDSLLQNTHRNIQLLNKQYAKHVLPSF 91
                8****************************75 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.05
   DASH_Ask1  13 qeIDanlsrcfriitk 28 
                  +I ++++rc+ri+++
  EPX73003.1 106 IDITNDFQRCHRILQN 121
                 46889*******9875 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 2.3
   DASH_Ask1  37 Ygeasekiwesakfwksffe 56 
                 +++a +ki e +  + ++f+
  EPX73003.1 212 HERAVAKIAEGILELAQMFQ 231
                 56667788888888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (301 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1652  (0.0921412); expected 358.6 (0.02)
Passed bias filter:                      686  (0.038262); expected 358.6 (0.02)
Passed Vit filter:                        66  (0.00368119); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 2157.68
//
Query:       EPX73004.1  [L=276]
Description: DUF947 family rRNA processing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.4e-50  169.2  27.9    7.4e-50  169.2  27.9    2.1  2  RRP36          rRNA biogenesis protein RRP36
  ------ inclusion threshold ------
      0.069   13.1   0.1       0.14   12.1   0.1    1.4  1  SecE           SecE/Sec61-gamma subunits of protein transloca


Domain annotation for each model (and alignments):
>> RRP36  rRNA biogenesis protein RRP36
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7  13.2       1.2     1e+04      75     112 ..      60     102 ..      27     104 .. 0.52
   2 !  169.2  27.9   8.2e-54   7.4e-50       2     166 .]     102     265 ..     101     265 .. 0.99

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 1.2
       RRP36  75 k.....eeekeelkrelqrlesrekerekkererevlkelkke 112
                        + +e+lk+e +++e++  +++kk+ e++  +++ ++
  EPX73004.1  60 IpfdtlLNAQEQLKAEQKKAEKKASSANKKKSEKKDDHKHAER 102
                 0222334555777777777777666666666665555555444 PP

  == domain 2  score: 169.2 bits;  conditional E-value: 8.2e-54
       RRP36   2 kskhaPtevsskkpvsrkrevvkvkkkksrDPRFdslsgeldedlfeknYaFLdeyrekEleelkkelkkekdkeeekeelkrelqrlesrekerekke 100
                 ++khaP+evsskkpv+r+revv+v+kk +rDPRFdslsg+l+++++++nY+F+ +yr+kE+e l++elkk kd +e+ e +k++l++l s+++++ ++e
  EPX73004.1 102 RKKHAPMEVSSKKPVTRFREVVSVPKKFTRDPRFDSLSGNLNKEKVKNNYSFVFDYRKKEIELLREELKKCKD-PERAETIKATLKSLLSKMERHIEEE 199
                 69********************9**************************************************.************************* PP

       RRP36 101 rerevlkelkkeekekvkegkkpfflkksekkklllkekfeelkkkkklekaierkrkKnasKekk 166
                 r+ +vl+e +  eke+vkegkkpf++kks++kkl++ +k+++++++kkl++++e k +++a+Kekk
  EPX73004.1 200 RKGRVLREQRAAEKEQVKEGKKPFYMKKSDQKKLIQLDKYKSMEGTKKLDRYLENKMRRRAQKEKK 265
                 *****************************************************************8 PP

>> SecE  SecE/Sec61-gamma subunits of protein translocation complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   1.5e-05      0.14       7      27 ..     165     185 ..     160     189 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 1.5e-05
                 HHHHHHCCCCCHCCHHHHHHH CS
        SecE   7 vkaElkKVtWPtrkEllkttv 27 
                  ++ElkK+  P r E++k t+
  EPX73004.1 165 LREELKKCKDPERAETIKATL 185
                 589****************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (276 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2844  (0.158626); expected 358.6 (0.02)
Passed bias filter:                      520  (0.0290033); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.29s 00:00:00.94 Elapsed: 00:00:00.44
# Mc/sec: 1895.11
//
Query:       EPX73005.1  [L=541]
Description: CMGC/DYRK/YAK protein kinase Ppk15 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      2e-47  161.8   0.2      5e-47  160.5   0.2    1.6  1  Pkinase         Protein kinase domain
    4.6e-19   68.7   0.0      7e-19   68.1   0.0    1.2  1  Pkinase_Tyr     Protein tyrosine kinase
    0.00051   20.0   0.1    0.00094   19.2   0.1    1.4  1  APH             Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.026   14.1   0.0      0.056   13.0   0.0    1.5  1  RIO1            RIO1 family
       0.12   11.1   0.0       0.15   10.8   0.0    1.2  1  Pkinase_fungal  Fungal protein kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  160.5   0.2   1.4e-50     5e-47       3     264 .]     134     460 ..     132     460 .. 0.87

  Alignments for each domain:
  == domain 1  score: 160.5 bits;  conditional E-value: 1.4e-50
                 EEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS.......CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS CS
     Pkinase   3 kleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklk.......hpnivrlyevfeekdelylvleyveggeladllerkgs 94 
                  l +lG+G+fG+V k+ + +t++ivA+K+ik++ a  ++    ++E++il+ l+        ++++rly+ f +k++l+lv+e+++ + l +l+++++ 
  EPX73005.1 134 ILDTLGHGTFGQVAKCQDLKTQRIVAIKVIKNKPAFYNQ---CVMEVSILEFLNnrydpddKRHLIRLYDQFMHKNHLCLVFELLSIN-LYELIKQNQF 228
                 5689****************************9999855...69******99986666767789**********************87.9999985555 PP

                 ..--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEE..TTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHH CS
     Pkinase  95 ..lseeeakkiakqilegleylHskgiiHrDlKpeNiLid..ekgelKitDFGlakelessskltsfvgtseYlAPEvlkeneyskkvDvWslGvilye 189
                   l  + ++++a q+l+  + l +++iiH+D+KpeNiL++  ++ ++K++DFG a++ +++  + +++ ++ Y++PEv+ + +y   +D+Ws+G+il+e
  EPX73005.1 229 rgLHLSLVRSFAIQLLSCASLLKQARIIHCDMKPENILLQdlSSPNVKVIDFGSACHERQT--VYTYIQSRFYRSPEVVLGLHYNCGIDMWSIGCILAE 325
                 469999*********************************9555777*********998875..69********************************** PP

                 HHHSS-STTTSSHHHHHHHHHHTHHHHHHHCT.......SHH...HHHTTS................................................ CS
     Pkinase 190 lltgkppfsgekgkekvekeldqlekilkilg.......etkeklpeasei................................................ 233
                 l+ g p+f+   g++    e++q+ +i+++lg       e+    ++                                                    
  EPX73005.1 326 LFLGLPLFP---GNS----EYNQICRIVDMLGnppawmiEMG---KN---Akkyfnisivngrkiyelksieqfsiennkveqpgkqyfgekaldaiim 411
                 *********...444....44444445555655443322211...22...122346677999999********************************** PP

                 ..................-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 234 ..................seeakdllkkllkkdpkkRltaeellqhpyl 264
                                      ++d++k+ l+ +p kR++ ++++ hp++
  EPX73005.1 412 nyprrkttpkhtpeeheeRLCFIDFVKQFLELNPLKRWSPDQAKLHPFI 460
                 **************99776779*************************96 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.1   0.0   1.9e-22     7e-19       5     204 ..     136     331 ..     133     352 .. 0.82

  Alignments for each domain:
  == domain 1  score: 68.1 bits;  conditional E-value: 1.9e-22
                  EEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-.......BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHT CS
  Pkinase_Tyr   5 kklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklk.......hpnivkllgvctkeepllivteyvkgGdLlkfLrkk 95 
                  ++lG+G+fG+V +++      k++  Va+K++k++      ++ + e++i++ l+       ++++++l+   +++++l++v+e+++  +L + ++++
   EPX73005.1 136 DTLGHGTFGQVAKCQDL----KTQRIVAIKVIKNKPAFY--NQCVMEVSILEFLNnrydpddKRHLIRLYDQFMHKNHLCLVFELLSI-NLYELIKQN 226
                  68***********9988....8999*******8776655..667777777766531222222679********************987.8******** PP

                  CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE..TTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHH CS
  Pkinase_Tyr  96 ekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse..nkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsf 191
                  + + l+l+ + sfa+q+ +  + L++ +++H d+   N+Ll++  +  vk+ DfG a +  ++  y+       +  + +pE++   +++   D+Ws 
   EPX73005.1 227 QFRGLHLSLVRSFAIQLLSCASLLKQARIIHCDMKPENILLQDlsSPNVKVIDFGSACHE-RQTVYTY----IQSRFYRSPEVVLGLHYNCGIDMWSI 319
                  ******************************************86578********88876.2222222....2234578******************* PP

                  HHHHHHHHTTSSG CS
  Pkinase_Tyr 192 GvllwEiftlges 204
                  G +l E+f  g  
   EPX73005.1 320 GCILAELFL-GLP 331
                  *******97.554 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.1   2.6e-07   0.00094     162     197 ..     245     284 ..     181     286 .. 0.75

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 2.6e-07
                 S....SS-EEEE-SS-SGGGEEEC....TTEEEEE---TT-E CS
         APH 162 g....elptvllHgDlhpgNllvd..pddgrvtGviDfedag 197
                 +      +++++H+D +p N+l++  + ++    viDf+ a+
  EPX73005.1 245 ScaslLKQARIIHCDMKPENILLQdlSSPNVK--VIDFGSAC 284
                 14444569****************99999998..*****997 PP

>> RIO1  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   1.5e-05     0.056      82     152 ..     209     283 ..     193     290 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.5e-05
                 EEEEE--EETTEEGGBHHHCG.-.HHHHHHHHHHHHHHHHHHHHTSTEEESS-STTSEEEETT...EEEE--GTTE CS
        RIO1  82 vlvmefigedgvaapklkdve.e.eeeaeelyeevleemrklykeaglvHaDLSeyNvlvded...kvviIDvsQa 152
                 +lv e+++ + +++ k ++ +    +  ++ + ++l+  + l+k+a+++H+D+   N+l+++    +v +ID++ a
  EPX73005.1 209 CLVFELLSINLYELIKQNQFRgLhLSLVRSFAIQLLS-CASLLKQARIIHCDMKPENILLQDLsspNVKVIDFGSA 283
                 7888888877777777666664334444555555555.8999*****************99743368899999866 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   4.2e-05      0.15     282     363 ..     202     287 ..      51     293 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 4.2e-05
  Pkinase_fungal 282 lenrvhrrlvispvGkpiekaespkel.......lealrDaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakels 363
                     + ++ h +lv++     +++  ++ ++       +++++  +    sL+++a+i+H D   +Nil+ d    ++++  +iD+  a+++ 
      EPX73005.1 202 FMHKNHLCLVFELLSINLYELIKQNQFrglhlslVRSFAIQLLSCASLLKQARIIHCDMKPENILLQD---LSSPNVKVIDFGSACHER 287
                     56677777777777777666655544322220003444444445679********************4...578889999999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (541 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       376  (0.0209716); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.55u 0.32s 00:00:00.87 Elapsed: 00:00:00.45
# Mc/sec: 3576.42
//
Query:       EPX73006.1  [L=48]
Description: hypothetical protein SOCG_00764 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00083   18.8   0.3     0.0011   18.5   0.3    1.2  1  Tom6      Mitochondrial import receptor subunit Tom6, fungal


Domain annotation for each model (and alignments):
>> Tom6  Mitochondrial import receptor subunit Tom6, fungal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.3     6e-08    0.0011      19      45 .]      22      48 .]      20      48 .] 0.93

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 6e-08
        Tom6 19 vllnvaLFvaGVaFIqSpLmdmLaPqL 45
                + + ++ F+a Va I+S + ++L+PqL
  EPX73006.1 22 IFISLGVFIASVAIIKSRVGNFLVPQL 48
                667899********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (48 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       755  (0.0421105); expected 358.6 (0.02)
Passed bias filter:                      474  (0.0264376); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.41
# Mc/sec: 354.83
//
Query:       EPX73007.1  [L=941]
Description: translation initiation factor eIF3c [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   8.8e-220  731.0   9.4   8.8e-220  731.0   9.4    4.1  3  eIF-3c_N      Eukaryotic translation initiation factor 3 subu
    2.9e-12   47.0   0.3    1.3e-11   44.9   0.0    2.3  2  PCI           PCI domain


Domain annotation for each model (and alignments):
>> eIF-3c_N  Eukaryotic translation initiation factor 3 subunit 8 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -9.4  17.1         2   1.8e+04     147     203 ..      33      87 ..      12      95 .. 0.42
   2 ?  -10.5  23.5         2   1.8e+04     143     199 ..      94     150 ..      83     172 .. 0.40
   3 !  731.0   9.4  9.8e-224  8.8e-220       2     592 ..     175     735 ..     174     736 .. 0.98

  Alignments for each domain:
  == domain 1  score: -9.4 bits;  conditional E-value: 2
                 XXXXXXXXXXX............................................... CS
    eIF-3c_N 147 deddegedeededeksvkateavkkaseskvekeeeedeeteee.klskkekkekvkm 203
                 +e+++ e+e++e+e+s   +++ +++ses++e e+e++e ++++    k+++ +k++ 
  EPX73007.1  33 EESSSSEEESSEEESS---SSSASESSESESESESESSESEDQKaPAKKPSVSKKPVS 87 
                 1222222222222222...222223344444444444443333303344444444444 PP

  == domain 2  score: -10.5 bits;  conditional E-value: 2
                 XXXXXXXXXXXXXXX.......................................... CS
    eIF-3c_N 143 eedededdegedeededeksvkateavkkaseskvekeeeedeeteeeklskkekke 199
                 +e e e++++++++de+e+s +++e  +++ses+++ e+e++ e+e+++ s++e + 
  EPX73007.1  94 SESESESESDSETSDESEESESDSEDDSEVSESESDSENESESESESQSESEAESES 150
                 222233333333333333333333333333444333333333333333333222222 PP

  == domain 3  score: 731.0 bits;  conditional E-value: 9.8e-224
                 ----TT---S--S-S-----SSGGGGTTTS-SSTTTTTTT---SSSHHHHHHHHHHH-HHHHHH..HH--S--XXXXXXXXXXXXXXXXX....XXXXX CS
    eIF-3c_N   2 klkkesseessdeedtkrVVksaKdKrfeeltsiiktiknakkikdlvklleeFdklnkalekaksqkenvktPrlyikvlaeledflnelwedkeakk 100
                 +l+ esseessdee+++rVVksaKdKr++e+  +i+++k+a++ + ++ +++eFd+lnk+ +k+    e+++ P  yi++l++l++ +++  +dk++ k
  EPX73007.1 175 FLRGESSEESSDEEEGRRVVKSAKDKRLDEFYACIDNMKDAMSGNKWIVVSNEFDHLNKVAQKS---SEAGRRPPAYIEFLSNLDQRVES--ADKAFIK 268
                 68899**********************************************************5...89*********************..******* PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX......................................... CS
    eIF-3c_N 101 klsknnakalntlrQkvkKynkqfeddikkyredPeeeeeeeeeded.eddegedeededeksvkateavkkaseskvekeeeedeeteeeklskkekk 198
                 +l+++n++aln+l+Q+v+K ++qf ++i+++r+dPe +++ ++e  d  +++g++ +de   +++at+ + ++s +                       
  EPX73007.1 269 SLDAANGRALNALKQRVRKISRQFTSEIERFRKDPEAFMKPTAEVADvPKAAGKAGQDEIIVGGVATRGIVAPSTG----------------------- 344
                 *****************************************9998662688999******************8888....................... PP

                 .....XXXXXXXXXHHHHHHHHHHHHHHTSSSXXHHHHHHHHHHHHHHXSTCCHHHHHHHHHHHHHHHHCCHTSSSXXHHHHHHHHHHHHHHHHHHHHC CS
    eIF-3c_N 199 ekvkmfekkeeitvevvikklkeilsaRgkkttdrseqielleeLlkiaeekelkvkikfsiisarfdvnaklseymkievwkkaleeinslldilvan 297
                        k eei   +++k+l++i++aRgkk+tdr+eqi+ le+L++ia ++++++++k+++++arfdvn+++++ym++e+w+ al+e++s+ldil+an
  EPX73007.1 345 -----EPKTEEISPSDIFKHLRAIFEARGKKSTDRAEQIRFLEKLSSIAVTDYQRLRVKVALLAARFDVNTGSGQYMPLEQWNGALKELHSILDILDAN 438
                 .....46899***************************************************************************************** PP

                 TTGCCXTTTXSSSXTTTTTTXX..XXXXCCCCCSHHHHHHHHHHHHHHHHHHHSXTTSHHHHHHHHHHHHHHHHHHHHHHHHHHCXXTCHHHHHHHHHH CS
    eIF-3c_N 298 anivvseevadeseeledetke..dadgvirvrGsilafverlddEfvkslqniDpHsndYverLkdEksllaliervqkYlErtgdskevarvylrri 394
                  +iv++e+v+de e++e+++++  +++gv++v+Gs+++f+erlddEf++slq+iDpH+ +Y+erLkdE+ l++l+ r+q YlEr+g +++++r+++rr+
  EPX73007.1 439 RKIVIVEQVEDEFEDEEEAVAAsaNNNGVVQVQGSVVSFLERLDDEFTRSLQMIDPHAPEYIERLKDETALYTLLVRSQAYLERIGVVENTSRLIMRRL 537
                 ***************9999887789************************************************************************** PP

                 HTTTTSXHHHHHHHHHHCHHCHHSXSSXHHCCTTXTTHHHHHHHHHHHHCTTSSXHHHHHHHHHHHHHHHHHHSXHHHHHHHHHHHXXSHHHHCSSSCH CS
    eIF-3c_N 395 ehiYYKfeevieaeeeslissfikvkekskekeataessdalmdkLckliykddeerirtrAiLchiyhhAlhdnfvkArDllLmShlQdniqhaDist 493
                 e++YYK+e+vi+a+ee + +s  + ++ + + +at++++d+l++ Lc ++y+ + + +rt+A+Lchiyh+Al+++f+k rD+lLmShlQd+i++aDi+t
  EPX73007.1 538 ERVYYKPEQVIRANEEAALHSLPSEFDLVVTPRATTDTPDKLINALCVYLYNHGISLLRTCAMLCHIYHEALQNRFYKSRDMLLMSHLQDSIHAADIAT 636
                 *************************************************************************************************** PP

                 HHHHHHHHHHHHHHHHHTTXHHHHHHHHHHHHTXTTHHHHTTXXXHHHHHHHHXSHHHHHHHHTTXXCCCXXXHHHHHHHHHHHHHHHHHHHHHHHHCT CS
    eIF-3c_N 494 qiLyNRtmvqlGlcAFrqglikeahqaLsdllstgrvkElLgQgvlqrrqhektaeqekierrrqlPyHmhiNleLlecVyLvcamLlEiPamaaaesd 592
                 qiL+NRtmvq+GlcAFr+g+i+ea++aL+d+++tgr+kElLgQg+++ r+ +++++qe+++++ +lP+HmhiNleLlecVyL+c+m +EiP maaa+s 
  EPX73007.1 637 QILHNRTMVQIGLCAFRNGMIQEAQYALQDISTTGRIKELLGQGIQAARFGQFNPDQERLDKQLVLPFHMHINLELLECVYLTCSMFMEIPVMAAASSS 735
                 ***********************************************************************************************9986 PP

>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.54   4.8e+03      31      56 ..     492     517 ..     470     562 .. 0.62
   2 !   44.9   0.0   1.5e-15   1.3e-11       2     105 .]     747     876 ..     746     876 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.54
                 HHTTHHHHHHHHHHHHHHHHHHHHHH CS
         PCI  31 addglaqllesLekkvrerllrqvsk 56 
                 +d++  +++e+L++++ + +l   s+
  EPX73007.1 492 IDPHAPEYIERLKDETALYTLLVRSQ 517
                 44555556666666655555544444 PP

  == domain 2  score: 44.9 bits;  conditional E-value: 1.5e-15
                 HHHHHHHHHHHTSHHHHHHHHHHH...............HHHHHHHTTHHH.............HHHHHHHHHHHHHHHHHHH....CESEEEHHHHHH CS
         PCI   2 sysdllkalrsgnlsgfseelkdl...............eeelladdglaq.............llesLekkvrerllrqvsk....iyssislerlak 68 
                 +++++l+  +++ + g++e+ +++               +eel+      +             + + L +k+re+ lr++ +    +y s+sl++la+
  EPX73007.1 747 PFRRMLEYTDRQLFIGPPENTREFimqaskalaegewrkSEELI------HaikiwnlmpdtekIKSILSDKIREEGLRTYLLsyaaFYDSVSLDSLAE 839
                 68888888888889999999999988888888866655533333......33333446666666**************99999**************** PP

                 HHTSSHHHHHHHHHHHHHTTSSSEEEETTTTEEEECS CS
         PCI  69 lldlsvdevEkilvklIrdgeirakidqesgivvfkk 105
                 + dl+ + v  i+++l ++ ei+a +dq+++ v+f++
  EPX73007.1 840 TSDLPLQRVTVIVSRLLSKREIHAALDQVHRAVIFER 876
                 ***********************************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (941 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2175  (0.121312); expected 358.6 (0.02)
Passed bias filter:                      754  (0.0420548); expected 358.6 (0.02)
Passed Vit filter:                       312  (0.017402); expected 17.9 (0.001)
Passed Fwd filter:                       131  (0.0073066); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 2.29u 0.37s 00:00:02.66 Elapsed: 00:00:00.63
# Mc/sec: 4468.64
//
Query:       EPX73008.1  [L=127]
Description: profilin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-45  154.0   0.0    2.5e-45  153.8   0.0    1.0  1  Profilin  Profilin


Domain annotation for each model (and alignments):
>> Profilin  Profilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.8   0.0   1.4e-49   2.5e-45       1     127 []       1     127 []       1     127 [] 0.99

  Alignments for each domain:
  == domain 1  score: 153.8 bits;  conditional E-value: 1.4e-49
                 HHHHHHHHCCCHHCSSESEEEEEETTSSSEEEEETTGG--HHHHHHHHHHHHSTCHHHHH-EEETTEEEEEEEEETTEEEEEETTEEEEEEE-SSEEEE CS
    Profilin   1 msWqayvdesllgtgkvdkAaIigadggsvwaasegfkvtpeevkaivkafkdpsklqsnGvtiggekYlviraddesiygkkgkegvvivktkqalvi 99 
                 msWqayvd+sllgtgk+d+AaI++ +g+svwaas+gf+++  e++ +++ f+dp +++ +G+++ g+kY++ira+ +siygk +k+g+++v tk ++++
  EPX73008.1   1 MSWQAYVDTSLLGTGKIDQAAIVSRAGDSVWAASSGFNLSGSEIQGLAAGFQDPPSMFGTGIHLSGQKYITIRAEGRSIYGKLQKSGIICVATKLCILV 99 
                 9*********************************************************************************9999************* PP

                 EEE-TTS-HHHHHHHHHHHHHHHHHCT- CS
    Profilin 100 avydegvqpgnankavekladyLisagy 127
                 a+y+e++ pg+a+k +e+ladyL   gy
  EPX73008.1 100 AHYPETTLPGEAAKITEALADYLVGVGY 127
                 ************************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       310  (0.0172904); expected 358.6 (0.02)
Passed bias filter:                      289  (0.0161191); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.26s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 944.34
//
Query:       EPX73009.1  [L=271]
Description: 20S proteasome component beta 5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.4e-44  150.2   0.2    5.4e-44  150.0   0.2    1.1  1  Proteasome  Proteasome subunit


Domain annotation for each model (and alignments):
>> Proteasome  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.0   0.2     3e-48   5.4e-44       1     190 []      57     239 ..      57     239 .. 0.96

  Alignments for each domain:
  == domain 1  score: 150.0 bits;  conditional E-value: 3e-48
                 HHHS-EEEEEEETTEEEEEEEEEEEETTEEEESSSSTSEEEEETTEEEEEEESHHHHHHHHHHHHHHHHHHHHHHSSGTCHHHHHHHHHHHHHHHHHHC CS
  Proteasome   1 vkkGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigvafaGlaaDartlvrraraeaqlyrlrygrpipverlvarvaaklqaytqrs 99 
                 +++Gtt++++++++g+v+++d+ra+ag  + +++tv+K+++i+++++ ++aG aaD++ +   + +e++l++lr+++ i+v+     +a+k++a++ +s
  EPX73009.1  57 MNHGTTTLAFRYQHGIVVCVDSRASAGPLV-ASQTVKKVIEINPYLLGTLAGGAADCQFWQTVLGMECRLHQLRNKELISVS-----AASKILANIMYS 149
                 79***********************99999.7777***********************************************.....************ PP

                 TTTTTS.EEEEEEEEETTTEEEEEEEETTSEEEEESSEEEESTTHHHHHHHHHHHHSTTBSHHHHHHHHHHHHHHHHHHBTTSCSSEEEEEE CS
  Proteasome 100 grrpfg.vslliagvdeeggpeLyqidpsGsyieekdavaiGsgseaaktalekeykedltleeavelavkalkealerdklsgknievavi 190
                 ++++ + +++++ag   +gg  Ly+id +G+ ++ + ++++Gsgs++a+++l++ y  +l++e+a+ l ++++ +a++rd++sg+ +++++i
  EPX73009.1 150 YKGYGLsMGTMLAGTG-KGGTALYYIDSDGTRLKGD-VFSVGSGSTFAYGVLDSGYDWNLSKEDALNLGRRSIVAATHRDAYSGGSLNLYHI 239
                 99776549********.6669**************6.*************************************************999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (271 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       316  (0.0176251); expected 358.6 (0.02)
Passed bias filter:                      286  (0.0159518); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 1906.65
//
Query:       EPX73010.1  [L=401]
Description: ribose-phosphate pyrophosphokinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.9e-43  144.9   0.2      7e-42  142.0   0.0    2.2  2  Pribosyltran_N  N-terminal domain of ribose phosphate pyropho
    2.8e-35  122.0   0.1    1.4e-29  103.4   0.0    2.3  2  Pribosyl_synth  Phosphoribosyl synthetase-associated domain
    1.7e-07   30.9   0.0    8.5e-07   28.6   0.0    2.0  2  Pribosyltran    Phosphoribosyl transferase domain
  ------ inclusion threshold ------
      0.096   12.7   0.1       0.63   10.0   0.0    2.1  2  SPA             Stabilization of polarity axis


Domain annotation for each model (and alignments):
>> Pribosyltran_N  N-terminal domain of ribose phosphate pyrophosphokinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.0   0.0   1.6e-45     7e-42       2     116 .]       5     120 ..       4     120 .. 0.98
   2 ?    0.2   0.0      0.16     7e+02      38      83 ..     285     327 ..     277     330 .. 0.75

  Alignments for each domain:
  == domain 1  score: 142.0 bits;  conditional E-value: 1.6e-45
  Pribosyltran_N   2 kifagssskeLaekiakrlgvelgkakvsrfadgEikveieesvrgkdvfiiqslskpvndnlmelllmidalrrasakritaViPylgysrqdr 96 
                      i+ g+s++eL + i++rlg++ ++++++rf++gE++vei++svr+kdvf++qs s+ vnd+lmell++i+a++ +sa+ritaV+Py++ys+q++
      EPX73010.1   5 AIIGGTSHPELLRLISQRLGIKPCEVSLKRFSNGETSVEIHDSVRDKDVFVLQSGSSTVNDSLMELLIIISACKGGSARRITAVMPYFPYSKQSK 99 
                     5999******************************************************************************************* PP

  Pribosyltran_N  97 k.ksrepisaklvaklLeaaG 116
                     + k r++i+a++va+lL+ aG
      EPX73010.1 100 MrKYRDAITARMVANLLTVAG 120
                     *666**************999 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.16
  Pribosyltran_N  38 kveieesvrgkdvfiiqslskpvndnlmelllmidalrrasakrit 83 
                      +++  +vrgk+  ++ ++ +++ + ++    +++ +    akr++
      EPX73010.1 285 MITLVGDVRGKTTLLMDDMIENPTTFIIAAEHLVKRC---GAKRVI 327
                     56677789********999999888877666665544...566665 PP

>> Pribosyl_synth  Phosphoribosyl synthetase-associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   1.5e-06    0.0066       1      36 [.     161     196 ..     161     233 .. 0.83
   2 !  103.4   0.0   3.1e-33   1.4e-29      73     184 .]     284     398 ..     249     398 .. 0.88

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 1.5e-06
                     TGGGEEEEESSGGGHHHHHHHHHHTT-EEEEE---- CS
  Pribosyl_synth   1 dyrnavivakspgsakkatsyaerlrlglavihGeq 36 
                     d+++av+v+kspg ak+ ts a+ l l  a+   ++
      EPX73010.1 161 DWQEAVVVSKSPGGAKRVTSMADTLGLEFALCNTDR 196
                     7899***********************999877654 PP

  == domain 2  score: 103.4 bits;  conditional E-value: 3.1e-33
                     ----EES--TTSEEEEEEEEE-S-HHHHHHHHHH.HHTT--EEEEEEEEE---TTHHHHHHHS.S--EEEEESSS--HHHHH.T-TTEEEE--HH CS
  Pribosyl_synth  73 ppltvvGdvgGriaiivddliddvesfvaaaevl.kerGaykiyvlathGllssdaprllees.aidevvvtntipheiqkl.rcskiktvdisl 164
                       +t+vGdv G+ ++++dd+i++ ++f+ aae l k  Ga +++v+ +hG++ ++  r le+   i+++vvtnt p + q l +++k+  +dis 
      EPX73010.1 284 RMITLVGDVRGKTTLLMDDMIENPTTFIIAAEHLvKRCGAKRVIVMGSHGIFQNNCLRDLENCnYIEQIVVTNTYPIKPQALaQSTKLALIDISG 378
                     469************************999986626669**********************97269**********9998753899********* PP

                     HHHHHHHHHHHT---TT-SS CS
  Pribosyl_synth 165 llaeairrihngesmsylfr 184
                     +laeairr hnges+s+lf+
      EPX73010.1 379 VLAEAIRRTHNGESISFLFK 398
                     ******************96 PP

>> Pribosyltran  Phosphoribosyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       1.8   8.3e+03      47      73 ..      19      46 ..      16      56 .. 0.54
   2 !   28.6   0.0   1.9e-10   8.5e-07      14     121 ..     150     329 ..     141     352 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 1.8
                  HHHHSTT-.EE-EEEEEE-TTT--EE.. CS
  Pribosyltran 47 ladeLevp.layvrkvkyrpdgseeaar 73
                  ++++L+++ + + +k+  ++++s e++ 
    EPX73010.1 19 ISQRLGIKpCEVSLKRFSNGETSVEIHD 46
                  6667755425555555555555555543 PP

  == domain 2  score: 28.6 bits;  conditional E-value: 1.9e-10
                   EEEETTEEEEEE--GGGEEEEEEETTTHHHHHHHHHHSTT-EE-EEE.EEE-TTT--EE...................................... CS
  Pribosyltran  14 avarlaaeileeyngkpdvvvgiargGvpfakiladeLevplayvrk.vkyrpdgseeaargssdes.............................. 79 
                   ++a+++++ +e+  +++ vvv    gG  +++ +ad L++++a  +  +++r+    ++ +++++e                               
    EPX73010.1 150 NIAEWIRRNVED--WQEAVVVSKSPGGAKRVTSMADTLGLEFALCNTdRSRRSHFPRSMDESIMEEEhvsnkqsdhprihtskyllghivddeevvg 244
                   366666666666..*****************************7766155556666666666666669***************************** PP

                   ..........................................EE----TTSEEEEE-SEESSSHHHHHHHH.HHHCC-BSEEEEE CS
  Pribosyltran  80 ..........................................rlledpagkkVliVDDildtGgTllaale.lLkekgpeevria 121
                                                             +l +d++gk+ l++DD++   +T + a+e l+k++g+++v+++
    EPX73010.1 245 tpasnvsedcqlentysqggcpsddeeeekimsasiftermiTLVGDVRGKTTLLMDDMIENPTTFIIAAEhLVKRCGAKRVIVM 329
                   *****************************************************************999999899******99986 PP

>> SPA  Stabilization of polarity axis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   0.00014      0.63      20      87 ..      45     121 ..      32     128 .. 0.70
   2 ?   -0.6   0.0      0.27   1.2e+03      25      39 ..     323     337 ..     303     363 .. 0.67

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00014
         SPA  20 nalltskriivlstkasadevsefvLalsnlisp.agdvlrgfknnsfPyvdlseldalekvpg...........yIvGv 87 
                  +++ +k ++vl + +s   v +  + l+++is  +g++ r + + + Py + s+ ++++k+             +++Gv
  EPX73010.1  45 HDSVRDKDVFVLQSGSST--VNDSLMELLIIISAcKGGSARRI-TAVMPYFPYSKQSKMRKYRDaitarmvanllTVAGV 121
                 566677788888777777..99***********9656666665.455777777777777777763335555555555555 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.27
         SPA  25 skriivlstkasade 39 
                  kr+iv++++   ++
  EPX73010.1 323 AKRVIVMGSHGIFQN 337
                 588888888765554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       509  (0.0283898); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.28s 00:00:00.81 Elapsed: 00:00:00.46
# Mc/sec: 2628.82
//
Query:       EPX73011.1  [L=321]
Description: protein phosphatase regulatory subunit Sds22 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-32  110.9  45.0      8e-09   35.7   0.2    7.1  8  LRR_4     Leucine Rich repeats (2 copies)
    1.4e-20   73.5  17.2    1.6e-08   34.3   8.0    4.1  4  LRR_9     Leucine-rich repeat
    4.5e-19   68.0  39.5    1.4e-06   28.0   2.7    6.6  6  LRR_8     Leucine rich repeat
    0.00032   20.5  21.6       0.23   11.6   0.2    7.0  7  LRR_6     Leucine Rich repeat
     0.0013   18.7   3.1         38    4.4   0.0    4.5  4  DUF2322   Uncharacterized protein conserved in bacteria (DUF2
  ------ inclusion threshold ------
       0.08   13.5  36.7        2.3    9.1   0.3    9.4  8  LRR_1     Leucine Rich Repeat
       0.36   11.0   0.2       0.36   11.0   0.2    4.4  5  FNIP      FNIP Repeat
        1.5    8.8   5.7        1.2    9.1   1.2    2.6  2  LRR_5     BspA type Leucine rich repeat region (6 copies)
        6.6    7.2   4.9         11    6.4   0.5    2.9  2  RTBV_P12  Rice tungro bacilliform virus P12 protein
          7    6.3   7.6         15    5.2   0.1    4.2  5  Arm_3     Atypical Arm repeat


Domain annotation for each model (and alignments):
>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0      0.15   2.7e+02      12      42 ..      21      52 ..      16      56 .. 0.67
   2 !   13.0   0.1   6.1e-05      0.11       4      44 .]      37      78 ..      34      78 .. 0.79
   3 !   17.7   2.4     2e-06    0.0036       2      43 ..      59      97 ..      58      98 .. 0.89
   4 !   26.0   4.4   4.9e-09   8.7e-06       2      43 ..     101     141 ..     100     142 .. 0.94
   5 !   27.5   3.9   1.6e-09   2.9e-06       2      42 ..     123     162 ..     122     165 .. 0.91
   6 !   22.6   4.6   5.6e-08    0.0001       1      43 [.     166     207 ..     166     208 .. 0.88
   7 !   35.7   0.2   4.4e-12     8e-09       2      43 ..     212     252 ..     211     253 .. 0.92
   8 !   14.7   0.0   1.8e-05     0.032       1      37 [.     255     294 ..     255     306 .. 0.83

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.15
                ---.E-S-HHH-TT.--EEE-.-S-----GGGG CS
       LRR_4 12 qlt.diplleklpn.LkeLdLsgNnlitdldeL 42
                q+  d +lle +p+  +++dL +  +it++  L
  EPX73011.1 21 QIDaDEDLLEDFPDdIEVIDLVQS-RITSIKAL 52
                566666777777777888888666.77777654 PP

  == domain 2  score: 13.0 bits;  conditional E-value: 6.1e-05
                -EEE--SS---E-S-HH..H-TT--EEE-.-S-----GGGGXX CS
       LRR_4  4 evLdLsnNqltdiplle..klpnLkeLdLsgNnlitdldeLkn 44
                ev+dL + ++t+i  l+   + +L +L L + n+i++++ L++
  EPX73011.1 37 EVIDLVQSRITSIKALGleRFHQLDSLCL-RQNQIRKIECLPK 78
                78999988*******66425777888878.766*****99875 PP

  == domain 3  score: 17.7 bits;  conditional E-value: 2e-06
                S--EEE--SS---E-S-HHH-TT.--EEE-.-S-----GGGGX CS
       LRR_4  2 nLevLdLsnNqltdiplleklpn.LkeLdLsgNnlitdldeLk 43
                +L +L+L++Nq+++i+    lp+ L+eLdL +N l++ +++L 
  EPX73011.1 59 QLDSLCLRQNQIRKIEC---LPKtLTELDLYDN-LLRHIENLD 97
                6889**********999...9999******666.**9999885 PP

  == domain 4  score: 26.0 bits;  conditional E-value: 4.9e-09
                 S--EEE--SS---E-S-HHH-TT--EEE-.-S-----GGGGX CS
       LRR_4   2 nLevLdLsnNqltdiplleklpnLkeLdLsgNnlitdldeLk 43 
                 +L++LdLs N++++i++ + l+ L+ L+  +N +i+++++L+
  EPX73011.1 101 HLKNLDLSFNNIKKIENVNHLKELENLYFVQN-RIRKIENLE 141
                 79**************************9899.*****9986 PP

  == domain 5  score: 27.5 bits;  conditional E-value: 1.6e-09
                 S--EEE--SS---E-S-HHH-TT--EEE-.-S-----GGGG CS
       LRR_4   2 nLevLdLsnNqltdiplleklpnLkeLdLsgNnlitdldeL 42 
                  Le+L++ +N++++i++le+l++L+ L L gN +i+++++L
  EPX73011.1 123 ELENLYFVQNRIRKIENLEGLTKLENLELGGN-NIRNIENL 162
                 79***************************777.89999887 PP

  == domain 6  score: 22.6 bits;  conditional E-value: 5.6e-08
                 SS--EEE--SS---E-S-HHH-TT--EEE-.-S-----GGGGX CS
       LRR_4   1 pnLevLdLsnNqltdiplleklpnLkeLdLsgNnlitdldeLk 43 
                 +n e+L+L+ N++t++++le+l  L  L++  N +it++++L+
  EPX73011.1 166 TNIEKLWLGKNKITKLENLENLQRLSLLSIQAN-RITRFENLN 207
                 799***************888999999999555.**9999885 PP

  == domain 7  score: 35.7 bits;  conditional E-value: 4.4e-12
                 S--EEE--SS---E-S-HHH-TT--EEE-.-S-----GGGGX CS
       LRR_4   2 nLevLdLsnNqltdiplleklpnLkeLdLsgNnlitdldeLk 43 
                  L++L++s+N lt+++++e l nL++Ld+ +Nn+i+ l+ Lk
  EPX73011.1 212 CLRELYISHNGLTSFEGIEALENLEVLDV-SNNYIKHLSHLK 252
                 59***************999*********.666***999886 PP

  == domain 8  score: 14.7 bits;  conditional E-value: 1.8e-05
                 SS--EEE--SS---E-S-....HHH-TT--EEE-.-S---- CS
       LRR_4   1 pnLevLdLsnNqltdipl....leklpnLkeLdLsgNnlit 37 
                 +nL++ + snN   +++     l++l +L++++  gN +++
  EPX73011.1 255 KNLQEFWASNNEFDSFQEiedeLGGLEKLETVYFEGN-PLQ 294
                 79**********9998885545558*********999.543 PP

>> LRR_9  Leucine-rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.3   0.1   9.9e-05      0.18      24      84 ..      39      97 ..      31     101 .. 0.82
   2 !   34.3   8.0   8.8e-12   1.6e-08      23     115 ..      82     171 ..      79     175 .. 0.92
   3 !   26.3   0.7   2.5e-09   4.5e-06      50     115 ..     174     238 ..     171     239 .. 0.93
   4 !   17.6   0.0   1.2e-06    0.0021      47     142 ..     216     312 ..     203     318 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 9.9e-05
       LRR_9 24 ldlrgykipvienlGat.ldqfdtidlsdndirkldgfPllkrlktlllnnnrivriaegle 84
                +dl   +i+ i+ lG     q+d++ l  n+irk++ +P  k l  l l +n +++i+ +l+
  EPX73011.1 39 IDLVQSRITSIKALGLErFHQLDSLCLRQNQIRKIECLP--KTLTELDLYDNLLRHIE-NLD 97
                57888899999***975279******************9..67888888888877774.455 PP

  == domain 2  score: 34.3 bits;  conditional E-value: 8.8e-12
       LRR_9  23 eldlrgykipvienlGatldqfdtidlsdndirkldgfPllkrlktlllnnnrivriaegleevlPnleelvltnnelqeladldPlaslkkl 115
                 eldl  + +  ienl   +  +  +dls n+i+k++++ +lk l+ l++ +nri++i+ +l e l +le+l l +n+++++ +ld l++++kl
  EPX73011.1  82 ELDLYDNLLRHIENLDEQV-HLKNLDLSFNNIKKIENVNHLKELENLYFVQNRIRKIE-NL-EGLTKLENLELGGNNIRNIENLDTLTNIEKL 171
                 8999999999*****8766.5889********************************95.56.5689************************998 PP

  == domain 3  score: 26.3 bits;  conditional E-value: 2.5e-09
       LRR_9  50 sdndirkldgfPllkrlktlllnnnrivriaegleevlPnleelvltnnelqeladldPlaslkkl 115
                   n+i kl+++  l+rl  l+++ nri+r  e+l+    +l+el +++n l+++  ++ l +l+ l
  EPX73011.1 174 GKNKITKLENLENLQRLSLLSIQANRITRF-ENLNCLSHCLRELYISHNGLTSFEGIEALENLEVL 238
                 679**************************7.79***********************9999988766 PP

  == domain 4  score: 17.6 bits;  conditional E-value: 1.2e-06
       LRR_9  47 idlsdndirkldgfPllkrlktlllnnnrivriaegleevlPnleelvltnnelqeladl.dPlaslkklellsllknpvtnkk..eyrlyviyklkql 142
                 + +s n +  ++g+  l+ l++l ++nn i ++++   + l nl+e+  +nne++++ ++ d l  l+kle++ +  np+ + +   yr+ +   l++l
  EPX73011.1 216 LYISHNGLTSFEGIEALENLEVLDVSNNYIKHLSHL--KGLKNLQEFWASNNEFDSFQEIeDELGGLEKLETVYFEGNPLQKSNpaLYRNKIRLCLPKL 312
                 56899***************************9863..5699*****************944799**************97654226888887777665 PP

>> LRR_8  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   1.2   2.5e-05     0.044       4      61 .]      37      90 ..      35      90 .. 0.87
   2 !   12.8   4.3   4.2e-05     0.075      26      61 .]      79     112 ..      77     112 .. 0.94
   3 !   24.8   7.9   7.5e-09   1.4e-05       2      61 .]     101     156 ..     100     156 .. 0.95
   4 !   12.4   2.9   5.7e-05       0.1      23      61 .]     164     200 ..     159     200 .. 0.93
   5 !   28.0   2.7   7.7e-10   1.4e-06       3      60 ..     213     266 ..     211     267 .. 0.92
   6 ?    1.6   0.0      0.13   2.4e+02      43      61 .]     275     293 ..     268     299 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 2.5e-05
                SEEE-TTS--SEE-TTSSTT-TT--EEE--SS---GGGGGGGTT--S.-.EEE--SS-- CS
       LRR_8  4 tsLdLsnNrltslddeaFkglsnLkvLdLsnNllttlspgafsgLps.LrsLdLsgNrL 61
                +++dL  +r+ts++    +++++L +L L++N+++ ++     +Lp+ L++LdL +N L
  EPX73011.1 37 EVIDLVQSRITSIKALGLERFHQLDSLCLRQNQIRKIE-----CLPKtLTELDLYDNLL 90
                5799*********************************7.....4433399999988876 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 4.2e-05
                 T--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8  26 nLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61 
                  L++LdL +Nll++++   ++   +L+ LdLs N++
  EPX73011.1  79 TLTELDLYDNLLRHIE--NLDEQVHLKNLDLSFNNI 112
                 699************6..9***************97 PP

  == domain 3  score: 24.8 bits;  conditional E-value: 7.5e-09
                 T-SEEE-TTS--SEE-TTSSTT-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8   2 nLtsLdLsnNrltslddeaFkglsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61 
                 +L++LdLs+N++++++    ++l+ L+ L+  +N+++ ++   ++gL++L+ L L gN++
  EPX73011.1 101 HLKNLDLSFNNIKKIEN--VNHLKELENLYFVQNRIRKIE--NLEGLTKLENLELGGNNI 156
                 7**************86..6899****************6..****************97 PP

  == domain 4  score: 12.4 bits;  conditional E-value: 5.7e-05
                 T-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8  23 glsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61 
                 +l+n + L L+ N++t l+   +++L +L  L ++ Nr+
  EPX73011.1 164 TLTNIEKLWLGKNKITKLE--NLENLQRLSLLSIQANRI 200
                 699***************6..****************97 PP

  == domain 5  score: 28.0 bits;  conditional E-value: 7.7e-10
                 -SEEE-TTS--SEE-TTSSTT-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS- CS
       LRR_8   3 LtsLdLsnNrltslddeaFkglsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNr 60 
                 L++L++s+N lts +    + l+nL+vLd snN +++ls   + gL++L++   s+N 
  EPX73011.1 213 LRELYISHNGLTSFEG--IEALENLEVLDVSNNYIKHLS--HLKGLKNLQEFWASNNE 266
                 89***********987..5678****************9..*********99888886 PP

  == domain 6  score: 1.6 bits;  conditional E-value: 0.13
                 GGGTT--S-.EEE--SS-- CS
       LRR_8  43 gafsgLpsLrsLdLsgNrL 61 
                 + + gL++L+  + +gN+L
  EPX73011.1 275 DELGGLEKLETVYFEGNPL 293
                 6777888888888888876 PP

>> LRR_6  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.1      0.06   1.1e+02       4      14 ..      79      89 ..      77      91 .. 0.83
   2 !   11.6   0.2   0.00013      0.23       4      16 ..     101     113 ..      99     114 .. 0.92
   3 ?   -2.6   0.1       4.8   8.5e+03       3       8 ..     119     124 ..     119     125 .. 0.83
   4 !    6.4   0.2    0.0061        11       3      17 ..     144     158 ..     142     159 .. 0.89
   5 ?   -1.6   0.1       2.2     4e+03       3      16 ..     166     179 ..     164     180 .. 0.82
   6 !    7.5   0.1    0.0026       4.7       2      16 ..     210     224 ..     209     232 .. 0.85
   7 ?    2.8   0.1     0.086   1.6e+02       4      13 ..     234     243 ..     231     246 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.06
       LRR_6  4 hLteLdLsgNd 14
                +LteLdL +N 
  EPX73011.1 79 TLTELDLYDNL 89
                9******8885 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 0.00013
       LRR_6   4 hLteLdLsgNdIg 16 
                 hL+ LdLs+N+I 
  EPX73011.1 101 HLKNLDLSFNNIK 113
                 9**********95 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 4.8
       LRR_6   3 thLteL 8  
                 +hL+eL
  EPX73011.1 119 NHLKEL 124
                 69**99 PP

  == domain 4  score: 6.4 bits;  conditional E-value: 0.0061
       LRR_6   3 thLteLdLsgNdIgD 17 
                 t+L+ L+L gN+I +
  EPX73011.1 144 TKLENLELGGNNIRN 158
                 89***********75 PP

  == domain 5  score: -1.6 bits;  conditional E-value: 2.2
       LRR_6   3 thLteLdLsgNdIg 16 
                 t++++L L  N+I+
  EPX73011.1 166 TNIEKLWLGKNKIT 179
                 6788888999*997 PP

  == domain 6  score: 7.5 bits;  conditional E-value: 0.0026
       LRR_6   2 nthLteLdLsgNdIg 16 
                 +++L+eL +s+N+++
  EPX73011.1 210 SHCLRELYISHNGLT 224
                 589**********98 PP

  == domain 7  score: 2.8 bits;  conditional E-value: 0.086
       LRR_6   4 hLteLdLsgN 13 
                 +L+ Ld+s N
  EPX73011.1 234 NLEVLDVSNN 243
                 89*******9 PP

>> DUF2322  Uncharacterized protein conserved in bacteria (DUF2322)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0     0.039        70      11      59 ..      57     102 ..      44     110 .. 0.77
   2 ?    4.2   0.1     0.024        43       4      36 ..     111     143 ..     108     151 .. 0.89
   3 ?    3.5   0.1      0.04        71       3      34 ..     176     207 ..     174     217 .. 0.86
   4 ?    4.4   0.0     0.021        38       5      36 ..     223     254 ..     219     284 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.039
     DUF2322  11 idhlaalelldaegevvatienkpGklgSlkvYnalaqkfgaldakaAe 59 
                 +++l++l l    ++++ +ie  p +l  l +Y +l ++ ++ld++   
  EPX73011.1  57 FHQLDSLCLR---QNQIRKIECLPKTLTELDLYDNLLRHIENLDEQVHL 102
                 4444444444...456999*******************99999987655 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.024
     DUF2322   4 nLktlpsidhlaalelldaegevvatienkpGk 36 
                 n+k++++++hl++le l   ++ + +ien +G 
  EPX73011.1 111 NIKKIENVNHLKELENLYFVQNRIRKIENLEGL 143
                 78999*********9999999********9995 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.04
     DUF2322   3 dnLktlpsidhlaalelldaegevvatienkp 34 
                 +++++l+++++l++l+ll+ + + + + en +
  EPX73011.1 176 NKITKLENLENLQRLSLLSIQANRITRFENLN 207
                 568899**************999999999865 PP

  == domain 4  score: 4.4 bits;  conditional E-value: 0.021
     DUF2322   5 LktlpsidhlaalelldaegevvatienkpGk 36 
                 L++++ i+ l++le+ld +++ ++++   +G 
  EPX73011.1 223 LTSFEGIEALENLEVLDVSNNYIKHLSHLKGL 254
                 889999***************99999988874 PP

>> LRR_1  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.1       1.7   3.1e+03       2      14 ..      60      75 ..      59      78 .. 0.69
   2 ?    3.8   0.3     0.072   1.3e+02       2      21 ..      80      94 ..      79      97 .. 0.77
   3 ?    4.4   1.2     0.045        80       1      12 [.     101     112 ..     101     140 .. 0.81
   4 ?    3.0   0.5      0.13   2.3e+02       1      15 [.     145     159 ..     145     166 .. 0.79
   5 ?    0.2   1.0       1.1     2e+03       1       1 [.     186     186 ..     167     212 .. 0.55
   6 ?    7.0   0.0     0.006        11       2      15 ..     213     226 ..     212     231 .. 0.85
   7 ?    9.1   0.3    0.0013       2.3       1      18 [.     234     249 ..     234     277 .. 0.83
   8 ?    4.9   0.0     0.031        55       1      20 [.     282     300 ..     282     310 .. 0.89

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 1.7
       LRR_1  2 LrhLdLsnnpl...lg 14
                L +L L++n++   ++
  EPX73011.1 60 LDSLCLRQNQIrkiEC 75
                6689999999844455 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.072
       LRR_1  2 LrhLdLsnnpllglppnsfq 21
                L++LdL +n l ++     +
  EPX73011.1 80 LTELDLYDNLLRHI-----E 94
                99*******99444.....3 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.045
       LRR_1   1 nLrhLdLsnnpl 12 
                 +L+ LdLs n++
  EPX73011.1 101 HLKNLDLSFNNI 112
                 699*******98 PP

  == domain 4  score: 3.0 bits;  conditional E-value: 0.13
       LRR_1   1 nLrhLdLsnnpllgl 15 
                 +L+ L L++n++ ++
  EPX73011.1 145 KLENLELGGNNIRNI 159
                 79********98433 PP

  == domain 5  score: 0.2 bits;  conditional E-value: 1.1
       LRR_1   1 n 1  
                 n
  EPX73011.1 186 N 186
                 2 PP

  == domain 6  score: 7.0 bits;  conditional E-value: 0.006
       LRR_1   2 LrhLdLsnnpllgl 15 
                 Lr+L++s+n l+++
  EPX73011.1 213 LRELYISHNGLTSF 226
                 9********99654 PP

  == domain 7  score: 9.1 bits;  conditional E-value: 0.0013
       LRR_1   1 nLrhLdLsnnpllglppn 18 
                 nL++Ld+snn +   + +
  EPX73011.1 234 NLEVLDVSNNYIK--HLS 249
                 8**********83..333 PP

  == domain 8  score: 4.9 bits;  conditional E-value: 0.031
       LRR_1   1 nLrhLdLsnnpllglppnsf 20 
                 +L++ + ++npl +++++++
  EPX73011.1 282 KLETVYFEGNPL-QKSNPAL 300
                 79**********.8888765 PP

>> FNIP  FNIP Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.2    0.0002      0.36       2      22 ..      68      88 ..      68      95 .. 0.83
   2 ?   -1.6   0.9       1.8   3.1e+03      26      28 ..     114     116 ..     101     132 .. 0.48
   3 ?   -0.7   0.3      0.92   1.7e+03      14      27 ..     146     159 ..     143     162 .. 0.76
   4 ?   -1.7   0.1       1.9   3.3e+03      14      22 ..     168     176 ..     163     192 .. 0.57
   5 ?   -1.0   0.1       1.1   2.1e+03      11      24 ..     224     245 ..     194     250 .. 0.62

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.0002
        FNIP  2 NqiikigeLPsnleiLilgrd 22
                Nqi ki++LP+ l+ L l ++
  EPX73011.1 68 NQIRKIECLPKTLTELDLYDN 88
                899999999999999999776 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.8
        FNIP  26 kil 28 
                 ki+
  EPX73011.1 114 KIE 116
                 333 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.92
        FNIP  14 leiLilgrdFnqki 27 
                 le+L+lg +  + i
  EPX73011.1 146 LENLELGGNNIRNI 159
                 89999988876665 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 1.9
        FNIP  14 leiLilgrd 22 
                 +e+L lg++
  EPX73011.1 168 IEKLWLGKN 176
                 555555444 PP

  == domain 5  score: -1.0 bits;  conditional E-value: 1.1
        FNIP  11 P........snleiLilgrdFn 24 
                 +        +nle L   +++ 
  EPX73011.1 224 TsfegiealENLEVLDVSNNYI 245
                 2555554446777777766655 PP

>> LRR_5  BspA type Leucine rich repeat region (6 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   1.2   0.00069       1.2      34     114 ..     110     188 ..     104     196 .. 0.74
   2 ?    0.2   0.1      0.39     7e+02      50      89 ..     223     264 ..     199     303 .. 0.59

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00069
       LRR_5  34 tslksitlpsslteigsyaFsncssltsitipssltsigeyaFsncsslkeitlpsnlttigssaFsncslesitipssvt 114
                 +++k+i+  + l+e+++  F +   + +i+  + lt++++      +++++i+   +lt+i++    + ++++++  ++++
  EPX73011.1 110 NNIKKIENVNHLKELENLYFVQN-RIRKIENLEGLTKLENLELG-GNNIRNIENLDTLTNIEKLWLGKNKITKLENLENLQ 188
                 35577777778888888888888.88888888888888888888.888888888888888888887777777776655555 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.39
       LRR_5  50 syaFsncssltsitips.sltsige.yaFsncsslkeitlps 89 
                   +F++ + l+++++ + s ++i+  +  ++ ++l+e+  ++
  EPX73011.1 223 LTSFEGIEALENLEVLDvSNNYIKHlSHLKGLKNLQEFWASN 264
                 445555555555555443444444313344455555555544 PP

>> RTBV_P12  Rice tungro bacilliform virus P12 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.5    0.0064        11      29      67 ..     104     141 ..      79     155 .. 0.80
   2 ?    1.5   0.1      0.22     4e+02      10      41 ..     160     191 ..     153     224 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0064
    RTBV_P12  29 nwvftleniksaadvnlaskglvqlyalqeidkkinnlt 67 
                 n  ++++nik   +vn   k l +ly +q+  +ki+nl 
  EPX73011.1 104 NLDLSFNNIKKIENVNH-LKELENLYFVQNRIRKIENLE 141
                 5567889*********6.599****************96 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.22
    RTBV_P12  10 ealekfknlesdtagkdkfnwvftleniksaa 41 
                 e l+ + n+e    gk+k+  +  len++  +
  EPX73011.1 160 ENLDTLTNIEKLWLGKNKITKLENLENLQRLS 191
                 77899999999999****99999999988655 PP

>> Arm_3  Atypical Arm repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.1    0.0085        15       6      19 ..     136     149 ..     133     155 .. 0.89
   2 ?   -1.6   0.0       1.1     2e+03       7      19 ..     159     171 ..     157     179 .. 0.83
   3 ?   -2.3   0.0       1.8   3.3e+03      13      20 ..     181     188 ..     174     189 .. 0.62
   4 ?   -2.5   0.0       2.2   3.9e+03      11      19 ..     227     235 ..     225     241 .. 0.69
   5 ?    2.4   0.2     0.065   1.2e+02       8      17 ..     275     284 ..     271     286 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.0085
       Arm_3   6 liEeagGldkIeaL 19 
                  iE ++Gl k+e+L
  EPX73011.1 136 KIENLEGLTKLENL 149
                 69***********9 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.1
       Arm_3   7 iEeagGldkIeaL 19 
                 iE ++ l  Ie+L
  EPX73011.1 159 IENLDTLTNIEKL 171
                 8999999999999 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 1.8
       Arm_3  13 ldkIeaLQ 20 
                 l+ +e+LQ
  EPX73011.1 181 LENLENLQ 188
                 45556665 PP

  == domain 4  score: -2.5 bits;  conditional E-value: 2.2
       Arm_3  11 gGldkIeaL 19 
                 +G++ +e+L
  EPX73011.1 227 EGIEALENL 235
                 566666666 PP

  == domain 5  score: 2.4 bits;  conditional E-value: 0.065
       Arm_3   8 EeagGldkIe 17 
                 +e+gGl+k+e
  EPX73011.1 275 DELGGLEKLE 284
                 599******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       748  (0.0417201); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.55u 0.29s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 2129.51
//
Query:       EPX73012.1  [L=1843]
Description: fatty acid synthase alpha subunit Lsd1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-73  246.9   0.0    2.3e-73  245.9   0.0    1.6  1  Fas_alpha_ACP    Fatty acid synthase subunit alpha Acyl carri
    3.4e-73  245.6   0.0    6.1e-73  244.8   0.0    1.4  1  FAS_I_H          Fatty acid synthase type I helical domain
    1.1e-19   71.0   0.0    2.3e-19   70.0   0.0    1.5  1  ketoacyl-synt    Beta-ketoacyl synthase, N-terminal domain
    1.7e-16   60.4   0.0    3.6e-16   59.3   0.0    1.6  1  ACPS             4'-phosphopantetheinyl transferase superfami
    8.1e-09   35.5   0.0      2e-08   34.3   0.0    1.7  1  Ketoacyl-synt_C  Beta-ketoacyl synthase, C-terminal domain
    1.2e-07   31.4   0.0    3.3e-07   29.9   0.0    1.7  1  adh_short        short chain dehydrogenase
    0.00027   20.6   0.0    0.00061   19.4   0.0    1.6  1  adh_short_C2     Enoyl-(Acyl carrier protein) reductase
     0.0027   17.8   0.4        1.7    8.7   0.0    2.6  2  Shikimate_DH     Shikimate / quinate 5-dehydrogenase
      0.003   17.5   0.0     0.0067   16.4   0.0    1.5  1  KR               KR domain
  ------ inclusion threshold ------
      0.056   14.0   0.1       0.18   12.4   0.1    1.8  1  F420_oxidored    NADP oxidoreductase coenzyme F420-dependent
      0.064   13.6   0.0       0.15   12.4   0.0    1.7  1  PP-binding       Phosphopantetheine attachment site
      0.089   13.3   1.9       0.27   11.8   1.9    1.8  1  DUF3597          Domain of unknown function (DUF3597)
        3.5    6.5   8.7        5.8    5.8   8.7    1.2  1  DEC-1_N          DEC-1 protein, N-terminal region


Domain annotation for each model (and alignments):
>> Fas_alpha_ACP  Fatty acid synthase subunit alpha Acyl carrier domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  245.9   0.0   1.7e-76   2.3e-73       1     162 []     144     305 ..     144     305 .. 0.99

  Alignments for each domain:
  == domain 1  score: 245.9 bits;  conditional E-value: 1.7e-76
  Fas_alpha_ACP   1 eDepvkavdivraivaqklkkkldevplsksikdlvgGkStlqNEilgdLqaEfgslpekaedlpleelaealqesfsGklGkqssslisrlvssk 96 
                    +Dep kav++++++vaqklkk+++e++l+ksikdlvgGkStlqNEilgdLq+Efg++pek+e++pl+ela  lq +fsG+lGkqs+slisr+vssk
     EPX73012.1 144 PDEPPKAVEVLHSLVAQKLKKSIEEISLQKSIKDLVGGKSTLQNEILGDLQKEFGATPEKPEEVPLDELAGVLQMTFSGSLGKQSNSLISRMVSSK 239
                    79********************************************************************************************** PP

  Fas_alpha_ACP  97 mpggfnlaairkyLekrwglgpgrqdsvlllavtsePakRlgseaeAkafldsvvqkyakkagisL 162
                    mpggfn++a+r yL++r+glg gr++svlll++t+ePa+Rl sea+Aka+ldsv qkya++ag++L
     EPX73012.1 240 MPGGFNNSAVRGYLSSRFGLGTGRTESVLLLGLTMEPASRLPSEADAKAWLDSVSQKYASRAGVTL 305
                    ****************************************************************98 PP

>> FAS_I_H  Fatty acid synthase type I helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  244.8   0.0   4.4e-76   6.1e-73       4     202 ..     334     532 ..     331     533 .. 0.98

  Alignments for each domain:
  == domain 1  score: 244.8 bits;  conditional E-value: 4.4e-76
     FAS_I_H   4 qnelvrqqlevlaryLgvdseasereaaessaevaelqaeLdlweaEhgdeylkgikpiFdakKaRrydSaWNwarqdilklyydllqgrlkdvdreik 102
                  + lv qqle++aryL+ d +a++++  +++a   +l+a+Ldlw+ Ehg+ y++gi piF+ +KaR+ydS WNwarqd+lk+++d+++grlk vd ei 
  EPX73012.1 334 NTMLVTQQLELFARYLNKDLRAGDKANVAERAVSDALRAQLDLWNLEHGEFYASGIAPIFSSLKARVYDSDWNWARQDALKMFFDIIFGRLKHVDTEIV 432
                 567899*********************9999999***************************************************************** PP

     FAS_I_H 103 srlqrilnRadenlvdlvqyllkkakassgekyaaakelgekllknarsalsaapvyvelseptaPrttidekGnieYeEvpragvqeledyveelksG 201
                 +r+ +i+nR+++ l++++qy+++++++++ge+y++ak+lg++l++n++  l+ +pvy++++ ptaP ttide+Gn++YeE+pragv++l++yv e+++G
  EPX73012.1 433 ARCISIMNRSNPLLLEFMQYHIDHCPTQNGETYQLAKTLGQQLIDNCKGVLESPPVYKNVDHPTAPSTTIDERGNLNYEEIPRAGVRKLTHYVTEMAKG 531
                 **************************************************************************************************9 PP

     FAS_I_H 202 s 202
                 +
  EPX73012.1 532 G 532
                 7 PP

>> ketoacyl-synt  Beta-ketoacyl synthase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.0   0.0   1.7e-22   2.3e-19      53     250 ..    1143    1348 ..    1112    1351 .. 0.81

  Alignments for each domain:
  == domain 1  score: 70.0 bits;  conditional E-value: 1.7e-22
                     EEE-BSS.EEE..STTEGGTTSTHHHHHHHCTS-HHHHHHHHHHHHHHHHHTS-HHTC.....TTGGEEEEEEESSTHHHHHHHHHHHTT.GGG CS
  ketoacyl-synt   53 aagkiktklggfldvddfdpeffgispreaeamdpqqrllleaawealedagltpeel.....dgsrvgvfiGvgagdyaalaaldedgs.evk 140 
                     +ag+i+           +dp+ fgi+++   ++dp + ++l+ + eal ++g+t+        + s+ g++iG+g+g  +al+ +++d   ++ 
     EPX73012.1 1143 VAGQIPL---------GWDPKRFGIPDDIISQVDPTTLYVLVSTVEALISSGITDPYEcykyiHVSELGNTIGSGIGGMSALRGMYKDRWtDKP 1227
                     5555555.........69***********************************87666577766677**********77555444433333333 PP

                     SCTTHHHHHSTTHHHHHHHHH.HT--SSEEEEESGGGHHHHHHHHHHHHHHTTS-SEEEEEEEE---SHHHHHHHHHTT.BB-TTSG....... CS
  ketoacyl-synt  141 aspkavgavlanviagrisya.lglrGpsvtvdtACsSslvavhaavqslrsgeadvalaGGvellltpeavagfsaag.llspdgr....... 225 
                     +  ++++    n++ + i++  l + Gp  t++ AC+++   v+aav+ + sg+a +++ GG + ++++e+ + f+++g  +++ +        
     EPX73012.1 1228 VQKDILQESFINTANAWINMLlLSASGPIKTPVGACATAVESVDAAVDLITSGKARICISGGFD-DFSEEGSYEFANMGaTVNAAEEtkrgrtp 1320
                     33355566899********9989*****************************************.99999999999999555555333445566 PP

                     GGTTBTTB...-SB-BB-EEEEEEEEEC CS
  ketoacyl-synt  226 ckafdpka...dGfvlGEGvGavvLkrl 250 
                     ++ ++p+    +Gf+ ++G+G+ +++++
     EPX73012.1 1321 QEMSRPATttrNGFMESQGAGIQIIMQA 1348
                     77777777888**********9888776 PP

>> ACPS  4'-phosphopantetheinyl transferase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.3   0.0   2.6e-19   3.6e-16       2     105 ..    1726    1824 ..    1725    1841 .. 0.83

  Alignments for each domain:
  == domain 1  score: 59.3 bits;  conditional E-value: 2.6e-19
                  EEEEEEEHHHHH.HHH-----HHHHHS-HHHHHHHTT--HHHHHHHHHHHHHHHHHHHHHTTS-SSS.S--GGG-EEEE-TTS-EEEE-S-SSEEEE CS
        ACPS    2 vGiDieklsrlrkrvkrrgakilkrifteeErkllkssdeearaelfarlWaaKEAllKalgpglrk.lldfksievledstgrptlellseakkka 97  
                  vG+D+e    ++ +++ +++ +l+r ft++Er++++++ +++    fa++W+aKEA++K+lg   +     +k+ie++ +stg+p++ l++ea+  a
  EPX73012.1 1726 VGVDVE---LIS-SINVENETFLERNFTDAERSYCEAAASPQS--SFAGRWSAKEAVFKSLGVVSKGaGCALKEIEIVVSSTGAPEVVLHGEAAEAA 1816
                  9*****...555.77779*******************999999..****************555522388**********************99888 PP

                  EEEE-... CS
        ACPS   98 wkleslki 105 
                     +++++
  EPX73012.1 1817 SAAGVKSV 1824
                  77666554 PP

>> Ketoacyl-synt_C  Beta-ketoacyl synthase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.3   0.0   1.4e-11     2e-08      30     117 ..    1482    1571 ..    1460    1572 .. 0.91

  Alignments for each domain:
  == domain 1  score: 34.3 bits;  conditional E-value: 1.4e-11
                       HHHHHHHHT--GGGEEEEE-SS-SSHHHHHHHHHHHHHHHGGGGG..SCTSEEE-THHHH-B-GGGHHHHHHHHHHHHHHHTEE--BTT- CS
  Ketoacyl-synt_C   30 iekalaeagvdpedvdyveahgtgtplgDpiElealkkvfgekar..kqplavgSvKsniGHleaAaGvaelikvvlalkhgvipptlnl 117 
                       ++ ala  g++ +d ++ + hgt+t ++ ++E+  +++ + + +r   + ++   +K ++GH++++aG+  l  v+++l+ g++p + n 
       EPX73012.1 1482 LRGALAVWGLTIDDLGVASFHGTSTVANEKNECDVINSQLTHLGRskGNAVYGVFQKYLTGHSKGGAGAWMLNGVLQILNSGYVPGNRNA 1571
                       678999***********************************999976556666678******************************9986 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.9   0.0   2.4e-10   3.3e-07       1     187 [.     637     837 ..     637     842 .. 0.81

  Alignments for each domain:
  == domain 1  score: 29.9 bits;  conditional E-value: 2.4e-10
                 SEEEEESTTSH.HHHHHHHHHHHTT-EEEE.EESCHHHHHHHHHHHHHT....TSEEEEEE-TTTSHHHHHHHHHHHHHHH....SSESEEEE---S.S CS
   adh_short   1 kvvlvtGassG.IGraiakelakeGakvvv.vdrseekleevakelkee....gakalaiqvDvtdreevealvekavkkl....gkldvLvnNAGi.t 88 
                 k +lvtGa++G IG ++++ l++ Gakvvv ++r ++k+ e ++++       g+ +++++++ +++++vealv+ + ++      +ld +v  A++ +
  EPX73012.1 637 KYALVTGAGAGsIGAQLVEGLIAGGAKVVVtTSRFSRKVTEFYQSMFTRhgsrGSALIVVPFNQASKQDVEALVDYIYDEKnglgWNLDFIVPFAAVpE 735
                 679*****9988******************99999999999999876665665777999******************99886666689*********76 PP

                 --SSGGGCSHHH..HHHHHHHHTHHHHHHHHHH..HHHHHHCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBS CS
   adh_short  89 gsgpfselseee..wervievNltgvflltrav..lpamlkqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvd 183
                 + +++ +++++     r++ +N+  ++ ++++   ++ m+ + +  I   s ++g  ++     Ys sK +++ l++ +  e      ++ + + G ++
  EPX73012.1 736 NGREIDNIDSRSefSHRIMLTNILRLLGAVKQQkeVRGMDTRPAQVILPLSPNHGTFGN--DGLYSESKLGLETLFNRWYSESWANYLTICGAVIGWTR 832
                 66666666665555678888998766666654411566999999999999999996655..568************99999887777888888888777 PP

                 .SHHH CS
   adh_short 184 .Tdma 187
                  T+++
  EPX73012.1 833 gTGLM 837
                 66665 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   4.5e-07   0.00061       3     152 ..     645     809 ..     643     824 .. 0.81

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 4.5e-07
                   T.TSHHHHHHHHHHHTT-EEEEEESSGGH..HHHHHHHHHHTTSE....E.EE--TTSHHHHHHHHHHHHHHH....SSEEEEEE-----EG.CSS- CS
  adh_short_C2   3 a.sgIGraiAkalaeeGaevvltdlneea..kkrveelaeelgae....v.lecDVtdeeqvealveevvekf....gklDilvnnagiapk.lkgp 86 
                      +IG+++++ l + Ga+vv+t  + ++   +  +++ +++g++    + ++ + +++++vealv+ + ++      +lD++v  a++ ++  + +
    EPX73012.1 645 GaGSIGAQLVEGLIAGGAKVVVTTSRFSRkvTEFYQSMFTRHGSRgsalIvVPFNQASKQDVEALVDYIYDEKnglgWNLDFIVPFAAVPENgREID 741
                   448******************997655443488888888888865554427******************98875555589************66666 PP

                   GGGH-HHHHHHHHHHHTHHHHHHHHHHHH..HCTSCCEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHH CS
  adh_short_C2  87 fletsreefdraldvnlyslfllakaalp..lmkeggsivnlssvgaervvpnynaygaaKaalealt 152
                    ++   e  +r++ +n+  l+  +k+ ++   m  + + v l     + ++ n   y+ +K +le l 
    EPX73012.1 742 NIDSRSEFSHRIMLTNILRLLGAVKQQKEvrGMDTRPAQVILPLSPNHGTFGNDGLYSESKLGLETLF 809
                   6777778888999999999999999888866677777777777777889999999*********9875 PP

>> Shikimate_DH  Shikimate / quinate 5-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4   0.1    0.0065         9      18      56 ..     644     682 ..     628     690 .. 0.82
   2 !    8.7   0.0    0.0012       1.7      72     101 ..    1790    1819 ..    1775    1835 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0065
                   ES-SHHHHHHHHHHHCCT-CEEEEEESSHHHHHHHHHHH CS
  Shikimate_DH  18 iGaGemaelvakhLlakgvkkvvvaNRtlerakelaeel 56 
                    GaG ++ ++++ L+a g+k vv + R  +++ e+ +++
    EPX73012.1 644 AGAGSIGAQLVEGLIAGGAKVVVTTSRFSRKVTEFYQSM 682
                   37889***************99999***99999988765 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0012
                    HHHT-SEEEE-SSSSS-SB-HHHHHCCHHH CS
  Shikimate_DH   72 llaeadvvisataseepilekeeveealkk 101 
                    +l+e+++v+s+t+++e++l+ e+ e+a+++
    EPX73012.1 1790 ALKEIEIVVSSTGAPEVVLHGEAAEAASAA 1819
                    699********************9998765 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   4.8e-06    0.0067       4      80 ..     640     718 ..     636     736 .. 0.89

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 4.8e-06
                 EEET.TTSHHHHHHHHHHHHHHS-EEEEE-SS...--HHHHHHHHHHHHTT-EEEE----TT-HHHHHHHHHHHHHHSS CS
          KR   4 litG.GlGgLGlelarwlaekgarhlvllsRsa.aadedskaliaelealgaevevvaaDvsdkdavealleeikaeep 80 
                 l+tG G+G++G +l++ l++ ga+ +v +sR + +++e  ++++++  ++g    vv+   ++k++veal++ i +e++
  EPX73012.1 640 LVTGaGAGSIGAQLVEGLIAGGAKVVVTTSRFSrKVTEFYQSMFTRHGSRGSALIVVPFNQASKQDVEALVDYIYDEKN 718
                 8999679************************7536777788899999999*********************99988775 PP

>> F420_oxidored  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   0.00013      0.18       6      45 ..     645     681 ..     641     701 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00013
                    TTSHHHHHHHHHHHHTTS-GGCEEEEEESSCCCHHHHHHH CS
  F420_oxidored   6 GaGnmgealasgllaagaqpheivvansrnpekaeelaee 45 
                    GaG++g+ l++gl+a g    ++vv++sr   k++e+ ++
     EPX73012.1 645 GAGSIGAQLVEGLIAGG---AKVVVTTSRFSRKVTEFYQS 681
                    9****************...**********9999998776 PP

>> PP-binding  Phosphopantetheine attachment site
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   0.00011      0.15       2      48 ..     153     200 ..     152     215 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00011
  PP-binding   2 klrelvaevlgvpleeidpdtdlfd.lGlDSllavellaaleeefgve 48 
                  l +lva+ l+ + eei+++ ++ d  G+ S l+ e+l+ l++efg +
  EPX73012.1 153 VLHSLVAQKLKKSIEEISLQKSIKDlVGGKSTLQNEILGDLQKEFGAT 200
                 6889********************98*******************973 PP

>> DUF3597  Domain of unknown function (DUF3597)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   1.9   0.00019      0.27      23      77 ..     110     179 ..      92     186 .. 0.62

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00019
                 -------SS---S.---------SS................EE-HHHH.HHHHHHHSS---TTT-HHHHH CS
     DUF3597  23 saapaataaaaaaaaaaPaaaaaaaaa..............vdveavl.ealaaksgeklnwrtSivDLl 77 
                  aapaa++a aaa+aaaPa+a+a+aaa              v+v   l  +  +ks e+   ++Si DL+
  EPX73012.1 110 GAAPAAAPAPAAAPAAAPAPAPAPAAAsgpavelpdeppkaVEVLHSLvAQKLKKSIEEISLQKSIKDLV 179
                 23333333333333333333333333333445688888888999766515668999999********996 PP

>> DEC-1_N  DEC-1 protein, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   8.7    0.0042       5.8     115     147 ..     114     150 ..     100     217 .. 0.74

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0042
     DEC-1_N 115 aaapap..alaaapppapapvp.ddp.apapaapqaa 147
                 aaapap  a+aaap papap++   p    p+ p+ a
  EPX73012.1 114 AAAPAPaaAPAAAPAPAPAPAAaSGPaVELPDEPPKA 150
                 3444441145666667777766444524567777554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1843 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       619  (0.0345251); expected 358.6 (0.02)
Passed bias filter:                      505  (0.0281667); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 1.05u 0.34s 00:00:01.39 Elapsed: 00:00:00.50
# Mc/sec: 11127.52
//
Query:       EPX73013.1  [L=748]
Description: lipase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-57  194.8   0.0    2.1e-57  194.2   0.0    1.2  1  DUF676    Putative serine esterase (DUF676)
  ------ inclusion threshold ------
       0.15   11.9   0.0       0.29   11.0   0.0    1.4  1  Lipase_3  Lipase (class 3)


Domain annotation for each model (and alignments):
>> DUF676  Putative serine esterase (DUF676)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  194.2   0.0   2.3e-61   2.1e-57       3     215 ..     253     456 ..     251     462 .. 0.95

  Alignments for each domain:
  == domain 1  score: 194.2 bits;  conditional E-value: 2.3e-61
      DUF676   3 kkdhLvVlvHGlqgn.saDlelikeqlekikeklpeekieflmsennesktfkgidvlgerlaeevlevvkkkkdk...nkkiSfvghSlGgliaraai 97 
                 +k+hLvVl+HG+++n +aD+e++keq+ k   + + e ++++++++n+++t+kgi++lg+rlae++le++ +  ++   +++iSf+ghSlGgl++++a 
  EPX73013.1 253 EKSHLVVLTHGMHSNiGADMEYLKEQIIK-AAEEKGELVVVRGYRGNYCQTEKGIRWLGKRLAEWLLEILGWGTNSfprYSHISFIGHSLGGLVQTYAA 350
                 799**************************.5557899******************************************99****************** PP

      DUF676  98 aklkekemtlkeaikglepvtfitlasPhLGvlysskslinlglalleklkkslsmeqlgltGrdLflkddkdeknsllykllkdekdlkliealklFk 196
                 +++++k++    ++++++pv f+tla+P+LGv+ ++++          ++ k+ls++++g+tG+dL l+   +  +   + +++++++ ++ +al+lF+
  EPX73013.1 351 GYVHAKTKG--RFFQAVHPVHFVTLATPWLGVAAEHPF----------YVGKALSYGIIGRTGQDLALMSGAHPIERRPFLVVMSDPASPFHQALSLFE 437
                 ****99875..67*************************..........*********************99999999999999999999********** PP

      DUF676 197 rrvlyanvvndrivplase 215
                 +r+l+an++nd+ivp+ + 
  EPX73013.1 438 HRTLFANTTNDYIVPYGTS 456
                 ****************993 PP

>> Lipase_3  Lipase (class 3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   3.3e-05      0.29      59     108 ..     325     379 ..     265     387 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 3.3e-05
                 HHHTT-.EEEEEEEETHHHHHHHHHHHHHHHTT-SS....---EEEEEES----B CS
    Lipase_3  59 lekype.ysivvtGHSLGgalAlLaaldlvengene....kkkvtvvtfGqPrvg 108
                  +++p    i + GHSLGg + + aa ++ ++ + +     ++v  vt+++P  g
  EPX73013.1 325 TNSFPRySHISFIGHSLGGLVQTYAAGYVHAKTKGRffqaVHPVHFVTLATPWLG 379
                 55666524699*************999999998888899999*********9776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (748 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       606  (0.0338); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.32s 00:00:00.95 Elapsed: 00:00:00.48
# Mc/sec: 4705.67
//
Query:       EPX73014.1  [L=317]
Description: complexed with Cdc5 protein Cwf21 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.8e-12   45.8  17.1    2.7e-10   40.2  17.1    2.7  1  cwf21     cwf21 domain
  ------ inclusion threshold ------
          8    4.5   6.6        9.6    4.2   6.6    1.1  1  HSP70     Hsp70 protein


Domain annotation for each model (and alignments):
>> cwf21  cwf21 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.2  17.1     3e-14   2.7e-10       2      44 .]      57     124 ..      56     124 .. 0.92

  Alignments for each domain:
  == domain 1  score: 40.2 bits;  conditional E-value: 3e-14
       cwf21   2 eHerrReIEvkvlelrdeL....Eeeg.....................lseeeIeervdelRekLlke 44 
                 +HerrR+IE+kvl++r+eL    E+++                      +ee+Ie  v+e+RekL+ke
  EPX73014.1  57 KHERRRQIESKVLLFREELlahtESQQarypeeevrerekteeeeegeKREETIEPLVQEYREKLWKE 124
                 7******************999988878899999999999999999966*****************98 PP

>> HSP70  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   6.6    0.0011       9.6     488     543 ..      90     146 ..      32     175 .. 0.74

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.0011
                 TCCEEEEEEECCSS.SBHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       HSP70 488 tgkeeeitieaseg.lseeeiekmvkdaeesaeedkkkkeaieakneaeelvyslek 543
                 + +e+e t e++eg   ee+ie +v++ +e   ++++++++  +kn+ e+l+++ +k
  EPX73014.1  90 EVREREKTEEEEEGeKREETIEPLVQEYREKLWKEAEQEDRYHEKNNFESLMHDEDK 146
                 333344444444444777888888888888888888888888888888888877655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (317 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1644  (0.091695); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.26s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 2193.38
//
Query:       EPX73015.1  [L=956]
Description: valine-tRNA ligase Vrs2/Vas2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   1.6e-156  522.0   0.0   3.8e-155  517.6   0.0    2.1  1  tRNA-synt_1    tRNA synthetases class I (I, L, M and V)
    1.6e-16   60.1   5.1    1.6e-08   33.8   0.2    3.4  2  tRNA-synt_1g   tRNA synthetases class I (M)
    7.9e-15   55.1   0.1    2.5e-14   53.5   0.0    1.8  2  Anticodon_1    Anticodon-binding domain of tRNA
    7.5e-06   25.6   0.0     0.0091   15.5   0.0    2.6  2  tRNA-synt_1_2  Leucyl-tRNA synthetase, Domain 2
    1.6e-05   24.4   0.0        0.2   10.9   0.0    2.5  2  tRNA-synt_1e   tRNA synthetases class I (C) catalytic domain
     0.0019   17.6   0.0      0.054   12.8   0.0    2.3  2  tRNA-synt_1b   tRNA synthetases class I (W and Y)
  ------ inclusion threshold ------
       0.07   12.0   0.2       0.15   10.9   0.2    1.5  1  tRNA-synt_1c   tRNA synthetases class I (E and Q), catalytic 
      0.072   12.0   0.0       0.14   11.0   0.0    1.4  1  tRNA-synt_1d   tRNA synthetases class I (R)
      0.098   13.1   0.1       0.24   11.8   0.1    1.6  1  GPS2_interact  G-protein pathway suppressor 2-interacting dom


Domain annotation for each model (and alignments):
>> tRNA-synt_1  tRNA synthetases class I (I, L, M and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  517.6   0.0  1.9e-158  3.8e-155      16     593 ..      58     634 ..      46     643 .. 0.94

  Alignments for each domain:
  == domain 1  score: 517.6 bits;  conditional E-value: 1.9e-158
  tRNA-synt_1  16 lekekekkefilvdgPPyvtGslHiGhalaktlkdivirykrmkGkevlyvpGwDhaGlaieakvekklgakekkerkklgreefrekvrewkaeyae 113
                  l+ + +++ f +  +PP++tG+lHiGhal+ t++d + ry++m+G++v ++pG+DhaG+a++++vek l +k + ++ +l++ ef+ +vr+w ++y+ 
   EPX73015.1  58 LNINSDAPLFPILLPPPNITGKLHIGHALTITIQDALARYYSMNGYKVSFRPGTDHAGIATQSAVEKYLNKK-GIKKSNLTESEFMLQVRDWEQQYQC 154
                  455677999***********************************************************9555.57999******************** PP

  tRNA-synt_1 114 eirkqvkrlGvsvDfdreylTldkeleeavkevfvrladkgliyrgkklvnwstklktalselEveykdkk..............dalihvafpladk 197
                  +irkq++ +G+ +D+++e  Tld++ + +v ++f +l+d g iyr+++ vnw++kl++a+se+Eve +  +              ++++++a+pl d+
   EPX73015.1 155 RIRKQLEAFGALFDWKNEFYTLDQKRTSSVSKAFIELFDSGYIYRANRFVNWCPKLASAISEMEVESQLISdpvtklingvavdfGYMYQIAYPLVDS 252
                  ******************************************************************999889999**********************9 PP

  tRNA-synt_1 198 eevklviaTTtPeTllgdtavavnpeldyvitkeklilaeallkslvkkesekkiledergkeLegkevelpl.vnrkipiiaddyvdkeaGtGvVki 294
                   + ++++ TT+PeT++gd+a+avnp                                d+r+++++gk+v++pl  +  +pi++dd vd ++ tG+ ki
   EPX73015.1 253 CNKSIIVSTTRPETVFGDRAIAVNPH-------------------------------DPRYQQFIGKFVRHPLrPDLVLPIVEDDAVDPNFYTGALKI 319
                  999***********************...............................****************446778******************* PP

  tRNA-synt_1 295 aPahdedDyevgkkynlevinildedgtlteeaaefeglkvfdarkkvveelkekglllkaekiehsvpfcerskkpiiyrateqWfvrvkeladaal 392
                  +P h + Dy ++k++n+++++ild +g+l +  +e +g+++  ar kvv+ l+++ +l+k+ +++  + +c+r++++i++ +++qW+ +v++l++ +l
   EPX73015.1 320 TPSHSSVDYDIAKRHNIPMATILDPKGRLVNCSNELDGMDRLCARPKVVQMLRDTKALVKEIPHSYVLSVCSRTGDVIEPIMVPQWYLSVDSLRERVL 417
                  *************************************************************************************************9 PP

  tRNA-synt_1 393 kave..kvqfvpkskekryaswleniqdWciSRqrwWGhriplfvsketeevvvreelkelvagreeeeaekkalekeakdklkkekgelekdedvlD 488
                  + ++  + +f p s++  +++wlen+qdWc+SRq  WGhrip++  ++ +        +++va++++eea +k       +       ++e+d+dvlD
   EPX73015.1 418 NLTKeqDLKFFPSSTKDDWYRWLENMQDWCLSRQIQWGHRIPVWKYETSD-------GEKWVAAESQEEAVRKS----NGA-------SVEQDSDVLD 497
                  9988889*************************************887755.......55677755555554444....333.......569******* PP

  tRNA-synt_1 489 vWFsSgswpfstlgypeedteelkkffpadmlleGlDiirgWvarlillslaltgsePfkevlvhglvrdeeGrKmSKslgNvidpldvik....... 579
                  +WFsS++ p s+ g+p e  ++++   +  ++++G Dii++W+ar++l+   +t+  Pf+ev++h l+rd+eGrKmSKslgNvidp+d+i        
   EPX73015.1 498 TWFSSSLLPLSSFGWPCE--KNVS---ALPFIESGKDIIFFWIARMALMCSYFTNVLPFREVILHPLIRDSEGRKMSKSLGNVIDPMDIIYgvsfekl 590
                  *****************9..5555...7889******************************************************************* PP

  tRNA-synt_1 580 ..............................kygadalRltlils 593
                                                + g dalR+ l+ls
   EPX73015.1 591 eekllegsfsksemgkslahlkksfpngirAQGLDALRFGLCLS 634
                  ***************************************99976 PP

>> tRNA-synt_1g  tRNA synthetases class I (M)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.8   0.2   7.8e-12   1.6e-08      10     136 ..      76     220 ..      69     223 .. 0.75
   2 !   24.6   0.8   4.9e-09   9.8e-06     182     344 ..     403     584 ..     382     603 .. 0.74

  Alignments for each domain:
  == domain 1  score: 33.8 bits;  conditional E-value: 7.8e-12
                   -SS---HHHHHHHHHHHHHHHHHHHTT-EEEEEEEE---SHHHHHHHH....HTTS-HHHHH............HHHHHHHHHHHHHTT---S...E CS
  tRNA-synt_1g  10 angklHlGhllevisaDifaRykrlrgeevlfvcgtDehGtpielkAe....kegvtpeelv............ekvheeikelfkklnisfd...k 87 
                   ++gklH+Gh+l++ + D++aRy  ++g++v f  gtD+ G++++ + e    k+g++ ++l+            ++++ +i+++++ ++  fd   +
    EPX73015.1  76 ITGKLHIGHALTITIQDALARYYSMNGYKVSFRPGTDHAGIATQSAVEkylnKKGIKKSNLTesefmlqvrdweQQYQCRIRKQLEAFGALFDwknE 172
                   689**************************************99887652222456655444411111222222256788899999999999995434 PP

                   EEETTSHHHHHHHHHHHHHHHHTT-EEEEEEEEEEETTTTEEE-GGG-E CS
  tRNA-synt_1g  88 ygrttseehkelvqeifkklkekgliyekeieqlycpkderflpdryve 136
                   ++ t +++ ++ v++ f +l + g+iy+ +  + +cpk  + +++ +ve
    EPX73015.1 173 FY-TLDQKRTSSVSKAFIELFDSGYIYRANRFVNWCPKLASAISEMEVE 220
                   55.55566666667777788889**************999998888876 PP

  == domain 2  score: 24.6 bits;  conditional E-value: 4.9e-09
                   EEEEE-GGGGHHHHHHHH.HH-TT.SHHHHHHHH.HHHHT----EE-ESS-SSS-EET..TECCEEE-HHHHHHHHHHHTTTTT-............ CS
  tRNA-synt_1g 182 ehlffklskfekklkewieeeeke.leenvkkivkewlkegLkdlaisrdldwGipvP..gaekkvlYVWldAligYisatkela.kkk........ 266
                    +++++++++++++ + ++e++ +  ++++k+    wl++ ++d+++sr+++wG ++P  + e      W+ A  +  ++ k    + +        
    EPX73015.1 403 PQWYLSVDSLRERVLNLTKEQDLKfFPSSTKDDWYRWLEN-MQDWCLSRQIQWGHRIPvwKYETSDGEKWVAAESQEEAVRKSNGaSVEqdsdvldt 498
                   589***************999888999999********99.*****************995555555556666655544444333122212222222 PP

                   ...TTSGGGG.G........--S......EEEE..EGGGHHHHHTHHHHHHHH.TT----S-EEEE--EE.E--------------HHHHHHH CS
  tRNA-synt_1g 267 ...geeekwkey........Wakdkevelvhfi..gkdiikFHtifwPaillg.aelklpkkvvaheylt.vegkKlSkSrgvvvkakealer 344
                      +                W  +k+v++  fi  gkdii F       +    +++   ++v+ h  +   eg+K+SkS g+v+++ +++  
    EPX73015.1 499 wfsS-------SllplssfgWPCEKNVSALPFIesGKDIIFFWIARMALMCSYfTNVLPFREVILHPLIRdSEGRKMSKSLGNVIDPMDIIYG 584
                   2221.......12222222577899*******9999****998877777766676777778888888875389*************9998765 PP

>> Anticodon_1  Anticodon-binding domain of tRNA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       4.8   9.5e+03     122     143 ..      40      61 ..      30      66 .. 0.50
   2 !   53.5   0.0   1.2e-17   2.5e-14       7     151 ..     695     839 ..     691     840 .. 0.78

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 4.8
  Anticodon_1 122 evellkeivkairklrselkik 143
                  ++  l++ v+ ++  rs+l+i+
   EPX73015.1  40 AWHELQQNVSRVEHSRSKLNIN 61 
                  3333344444444444444444 PP

  == domain 2  score: 53.5 bits;  conditional E-value: 1.2e-17
  Anticodon_1   7 elnklvkevteayeeyrfnkaasalyeffwndlcdwylelvkprlysesaedkra.aqevllevletllrllaPfmPfitEelwqr..eeeelgkkes 101
                  +l+ +vk+++e++e+ ++ k+   l +f++ dl+  y+++++ +l+  ++   r  + +  +++++ +lrl +P++P +t+ lw++         k  
   EPX73015.1 695 RLHLTVKSCRENFENRSLFKVSETLEKFLLTDLSVEYVDVTRLILKHPEG---RDlVLQHFRDIMNVFLRLAHPVIPCLTDVLWEHlnY----VPKGP 785
                  89***************************************999966444...566899*************************55430....45578 PP

  Anticodon_1 102 imlaewpe.kaeelekel..e.eeevellkeivkairklrselkikpsselkvv 151
                  +++ ++p  ++ +l+ e+  + +  v+   +i+  +r+l+ + +++++ el v+
   EPX73015.1 786 LHNIDYPFvDEGKLTSEEvaHaNDVVKETMKIIYYLRSLKINRQLSKAPELPVY 839
                  99999**87776664333333455555555566666667766666666666665 PP

>> tRNA-synt_1_2  Leucyl-tRNA synthetase, Domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0    0.0015         3      11      46 ..     244     280 ..     242     286 .. 0.86
   2 !   15.5   0.0   4.6e-06    0.0091      85     145 ..     286     347 ..     283     362 .. 0.89

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0015
  tRNA-synt_1_2  11 eiefkvees.eeklevfttrpdtlfGvtfvalapehp 46 
                    +i +++ +s ++++ v ttrp+t+fG   +a+ p+ p
     EPX73015.1 244 QIAYPLVDScNKSIIVSTTRPETVFGDRAIAVNPHDP 280
                    677888888799***************9999999887 PP

  == domain 2  score: 15.5 bits;  conditional E-value: 4.6e-06
  tRNA-synt_1_2  85 tglkaihPit.gekipiwvanyvlmeygtgavmavPahdqrDfeFakkynlpikqvikpede 145
                     g ++ hP+  +  +pi   + v  ++ tga+   P+h + D++ ak++n+p+ +++ p+++
     EPX73015.1 286 IGKFVRHPLRpDLVLPIVEDDAVDPNFYTGALKITPSHSSVDYDIAKRHNIPMATILDPKGR 347
                    578899***977889******************************************99875 PP

>> tRNA-synt_1e  tRNA synthetases class I (C) catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.0   0.00012      0.23      19      69 ..      76     125 ..      69     205 .. 0.74
   2 !   10.9   0.0    0.0001       0.2     241     285 ..     555     599 ..     525     609 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00012
                   TTS--BHHHHHHHHHHHHHHHHHHHTT-EEEEEEEBB--SHHHHHHHHHTT CS
  tRNA-synt_1e  19 vydashlGhaRslvafDilrrilqalgYdvqfvqnvtDidDkiikrareee 69 
                   +  + h+Gha ++ + D l+r+  + gY+v+f +  tD      + a+e++
    EPX73015.1  76 ITGKLHIGHALTITIQDALARYYSMNGYKVSF-RPGTDHAGIATQSAVEKY 125
                   66789*************************99.445555555555555555 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.0001
                   EEEE--EEETTBE--TTTT---BHHHHHTTS-HHHHHHHHHSS-T CS
  tRNA-synt_1e 241 flhnghlkiegekmsksLknfitikdvlkkfdprqlRllllsahy 285
                    lh  +   eg+kmsksL+n+i   d++  +++++l   ll+  +
    EPX73015.1 555 ILHPLIRDSEGRKMSKSLGNVIDPMDIIYGVSFEKLEEKLLEGSF 599
                   56666667799******************9999999888887766 PP

>> tRNA-synt_1b  tRNA synthetases class I (W and Y)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0     0.052     1e+02      15      64 ..      77     129 ..      75     150 .. 0.73
   2 !   12.8   0.0   2.7e-05     0.054     178     210 ..     547     577 ..     526     585 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.052
                   SSS-BGGGHHHHHHHHHHHH....TTSEEEEEEEHHHHHTTTTT-SSHHHHHHH CS
  tRNA-synt_1b  15 TgklHlGylvplkklvelqk....aghevffliaDlhAiigdpskaeerklrkr 64 
                   TgklH+G+ + ++   +l +    +g++v f  +  hA i  +s a e+ l+k+
    EPX73015.1  77 TGKLHIGHALTITIQDALARyysmNGYKVSFRPGTDHAGIATQS-AVEKYLNKK 129
                   9******9887764433333335799999999888888888888.666666665 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 2.7e-05
                   STTSS-EEEEET-BBSTTSSSBTTCETTCGC-B CS
  tRNA-synt_1b 178 evfkkpegltvplltgldGekKmSKSagnsaIf 210
                   +v++ +e++++pl+ +++G  KmSKS gn +I+
    EPX73015.1 547 NVLPFREVILHPLIRDSEGR-KMSKSLGN-VID 577
                   56778999************.********.775 PP

>> tRNA-synt_1c  tRNA synthetases class I (E and Q), catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.2   7.7e-05      0.15       7      32 ..      73      98 ..      72     103 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 7.7e-05
                  ---SSSS-BHHHHHHHHHHHHHHHHT CS
  tRNA-synt_1c  7 aPePtGyLHiGhakaallnylfAknn 32
                  +P+ tG LHiGha ++ +  ++A+++
    EPX73015.1 73 PPNITGKLHIGHALTITIQDALARYY 98
                  8999**************99999976 PP

>> tRNA-synt_1d  tRNA synthetases class I (R)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   7.2e-05      0.14      29      60 ..      74     105 ..      69     114 .. 0.94

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 7.2e-05
                   -BTTS--BHHHHHHHHHHHHHHHHHHHCT-EE CS
  tRNA-synt_1d  29 PniakemhvGhLrstiiGdavsrlleflGydv 60 
                   Pni  ++h+Gh  +  i da++r + + Gy+v
    EPX73015.1  74 PNITGKLHIGHALTITIQDALARYYSMNGYKV 105
                   9***********9999***************9 PP

>> GPS2_interact  G-protein pathway suppressor 2-interacting domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   0.00012      0.24      24      84 ..     879     940 ..     868     945 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00012
  GPS2_interact  24 psrlsKdeLlqnidk.vDREiakveqqiskLkkkqkeleeeaakpkeeekpvepssseskhr 84 
                    ++ +s d +l   dk + R + k e++i +L+kk ++l+  a++   ++ p + +  +++hr
     EPX73015.1 879 QFMVSTDTMLMLPDKmMHRNLPKLERKIMELQKKVEKLDLVAKSAGYTKAPLSVKARNKQHR 940
                    5666777777777773479*************************999999999887777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (956 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       714  (0.0398237); expected 358.6 (0.02)
Passed bias filter:                      541  (0.0301746); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.92u 0.35s 00:00:01.27 Elapsed: 00:00:00.62
# Mc/sec: 4665.37
//
Query:       EPX73016.1  [L=462]
Description: sphingoid long chain base kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-27   95.2   0.0    3.4e-27   94.6   0.0    1.3  1  DAGK_cat  Diacylglycerol kinase catalytic domain
  ------ inclusion threshold ------
        0.2   11.0   0.0       0.27   10.5   0.0    1.2  1  PFK       Phosphofructokinase


Domain annotation for each model (and alignments):
>> DAGK_cat  Diacylglycerol kinase catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.6   0.0   3.8e-31   3.4e-27       2     125 ..     107     235 ..     106     236 .. 0.95

  Alignments for each domain:
  == domain 1  score: 94.6 bits;  conditional E-value: 3.8e-31
                 EEEEE-TTCTTTTHHHHH.HHCHHHHHHCTCEEEEEE--STTHHHHHHHHHHHCC-SEEEEEESHHHHHHHHHHHCT....HHCTTSEEEEEE-SS--H CS
    DAGK_cat   2 llvivNpksGkgkgekll.rkvrelleeagvelelieteepgdakelakeakeegvdlivvaGGDGtvsevlnglle....elatkpplgiiPlGtgNd 95 
                 ++v+vNp +G+gk++k++ + + ++++ a++e++++ te++++a++++++++ ++ d+i+++GGDG+++e+lngl +    ++a ++pl++iP+GtgN+
  EPX73016.1 107 FFVLVNPFGGQGKASKIWqQIASPIFQTAHLECRIVFTEYKNHARSIIANIDLNSLDAIICVGGDGLFHECLNGLGDrkdnNAAFETPLCMIPGGTGNA 205
                 68****************666789*****************************************************988888889************* PP

                 HHHHCT--SSHHHHHHCHHCTBEEEEEEEE CS
    DAGK_cat  96 laralgigkdieealesiikgetrkvdvgk 125
                 ++++   ++ +   +  i+kg ++++d+++
  EPX73016.1 206 FSYNATQETHPALVALEIVKGVKKSFDLMT 235
                 *****99999999999999*******9986 PP

>> PFK  Phosphofructokinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0     3e-05      0.27      75     129 ..     145     201 ..      79     211 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 3e-05
                 GSHHHHHHHHHHHHHHT--EEEEEESHHHHHHH.HHHHHT..T.....--EEEEEEE CS
         PFK  75 keregrkkaaenlkklgidaLvviGGdgslkga.nklseerkgllee.lkivgiPkT 129
                 + +++ + +++n++ + +da++++GGdg ++ + n l +++++  ++  ++++iP+ 
  EPX73016.1 145 EYKNHARSIIANIDLNSLDAIICVGGDGLFHEClNGLGDRKDNNAAFeTPLCMIPGG 201
                 33455899********************98765144665554433224788888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (462 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       406  (0.0226449); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.45
# Mc/sec: 3109.16
//
Query:       EPX73017.1  [L=583]
Description: esterase/lipase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.2e-29  102.8   0.0    1.5e-19   70.7   0.0    2.2  2  Abhydrolase_3  alpha/beta hydrolase fold
    1.7e-11   43.6   0.1    8.8e-11   41.3   0.1    2.0  1  Say1_Mug180    Steryl acetyl hydrolase
  ------ inclusion threshold ------
      0.071   12.9   0.0       0.13   12.0   0.0    1.3  1  Abhydrolase_2  Phospholipase/Carboxylesterase


Domain annotation for each model (and alignments):
>> Abhydrolase_3  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.7   0.0   2.6e-23   1.5e-19       1     156 [.     138     284 ..     138     318 .. 0.83
   2 !   30.1   0.0   6.8e-11   4.1e-07     141     209 ..     350     423 ..     331     425 .. 0.90

  Alignments for each domain:
  == domain 1  score: 70.7 bits;  conditional E-value: 2.6e-23
                    EEEE--STTTS--TTTTHHHHHHHHHHHTSEEEEEE---TTTS-TTHHHHHHHHHHHHHHHTHHHHTETTCEEEEEEETHHHHHHHHHHHHHHHTT CS
  Abhydrolase_3   1 lvyfHGGGfvlgsldthdalcrelakelgavvvsvdYrlAPehpfPaavedalaalrwlaeqawelgadpsrivlaGdSaGGnlaaavalrardeg 96 
                    ++y+HGG+ +l +++t+   +++ +++lg++ ++++ rlAP+ p+P  ++d+l+++ +l  +     +dp++i++ GdS G+ l   +++ +rd +
     EPX73017.1 138 IFYVHGGAHYLSTVRTNAYHIQKHTSALGVRTFAPEIRLAPQFPAPCSLHDILSSYLYLIRN-----HDPKNIIFIGDSSGASLLISLLVLMRDCN 228
                    68***********************************************************9.....8**************************** PP

                    ---EEEEEEESE-SSTSSTTSHHHHHCHHTTTSSSSCHHHHHHHHHHHSSGGGGGSTTTS CS
  Abhydrolase_3  97 epkvagqvliyPvtdlertesesikkaeeladgplltraaldlfwrlylpeadrddplas 156
                     p +ag+vl +P++dl +++ +si +    ++   ++++ ++  ++ + p a++d+  as
     EPX73017.1 229 IPLPAGTVLNSPWVDL-THSLPSILDD--SST-DYIPPEGFHHRASRCWPVANADSLFAS 284
                    999*************.8888999544..222.234455555444444455555555555 PP

  == domain 2  score: 30.1 bits;  conditional E-value: 6.8e-11
                    HHHHSSGGGGGSTTTSGGGCS-SST---EEEEEETT-TTHHHHHHHHHHHHH.....TT--EEEEEETTEETTG CS
  Abhydrolase_3 141 wrlylpeadrddplaspllaedlsglpptlvvvaefDplrdegeayaerlra.....agvevelieyegmvHgf 209
                    ++ y+p++ +++p +spl+ e+l glpptlv+ +  + lrde + +a++++      ++++v+l+ y+  +H++
     EPX73017.1 350 IQFYAPNHLLTHPVISPLFTENLGGLPPTLVLGGASERLRDEVIYLAHKMANdvyngEKTKVQLELYDSCCHVV 423
                    5789999*******************************************977887788899999999999975 PP

>> Say1_Mug180  Steryl acetyl hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.3   0.1   1.5e-14   8.8e-11     105     239 ..     119     246 ..     108     260 .. 0.83

  Alignments for each domain:
  == domain 1  score: 41.3 bits;  conditional E-value: 1.5e-14
  Say1_Mug180 105 skfvwlrkvpetfdPkvDpvllylHGGgfalklipvtlvfLsnlrklfpdmailvsDYtvtaakdqskkYplqvleslavydylvkskgfknvvvlGd 202
                  s + ++r+   +  Pk ++v+ y+HGG   l  +++    ++       + a+ v  ++       +   p  + ++l  y yl++    kn++ +Gd
   EPX73017.1 119 S-WWFKRRRTAQHLPKNEKVIFYVHGGAHYLSTVRTNAYHIQKH-----TSALGVRTFAPEIRLAPQFPAPCSLHDILSSYLYLIRNHDPKNIIFIGD 210
                  4.344555578889**************9999887755444333.....345556666666666778888999************************* PP

  Say1_Mug180 203 SaGGnlvLslllklsklnkvvlPkkaiaiSPWlnlti 239
                  S+G  l++sll+ ++++n   lP + ++ SPW++lt 
   EPX73017.1 211 SSGASLLISLLVLMRDCNI-PLPAGTVLNSPWVDLTH 246
                  *****************98.79************994 PP

>> Abhydrolase_2  Phospholipase/Carboxylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   2.2e-05      0.13     103     213 ..     201     316 ..     187     319 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.2e-05
                    -GGGEEEEEETHHHHHHHHHHHT-SS....--SEEEEES---TTGGGTTTTS-GGG.GG-EEEEEEETT-SSS-HHHHHHHHHHHHTTS-GEEEEE CS
  Abhydrolase_2 103 pssriiigGFSqGaalalylaltlpk....klggivafsgalplsqklessatavt.kklpilqiHgeeDpvvplalgkaakevlkkllkkvelks 193
                    + ++ii++G S Ga l + l +  +       +g+v  s ++ l  +l+s    +   ++p    H   +   p+a +  +    ++++k+ +++ 
     EPX73017.1 201 DPKNIIFIGDSSGASLLISLLVLMRDcnipLPAGTVLNSPWVDLTHSLPSILDDSStDYIPPEGFHHRASRCWPVANADSLFASTTSSMKNLTKEE 296
                    6789***********99888777766666444899**************9887665489************************************* PP

                    ETT--SS--HHHHHHHHHHH CS
  Abhydrolase_2 194 yeglaHsideeemqdikefl 213
                    ++ +  + ++++m +ik++l
     EPX73017.1 297 LTTMISERMQHQMDKIKSSL 316
                    *****************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (583 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       534  (0.0297841); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.64u 0.27s 00:00:00.91 Elapsed: 00:00:00.46
# Mc/sec: 3819.31
//
Query:       EPX73018.1  [L=2039]
Description: myosin type-2 heavy chain 2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   2.7e-259  862.0   3.1   2.7e-259  862.0   3.1    2.9  4  Myosin_head  Myosin head (motor domain)
    1.6e-08   34.3   0.9    4.1e-08   32.9   0.2    2.1  2  Myosin_N     Myosin N-terminal SH3-like domain
     0.0037   17.3   8.8     0.0037   17.3   8.8   12.6 14  ADIP         Afadin- and alpha -actinin-Binding
  ------ inclusion threshold ------
      0.041   14.1   0.0      0.041   14.1   0.0    5.0  5  AAA_22       AAA domain
       0.18   12.1   0.0       0.18   12.1   0.0    4.7  5  AAA_16       AAA ATPase domain
        0.2   12.1   2.7         20    5.6   0.0    4.6  3  AAA          ATPase family associated with various cellular a
        0.2   12.0   0.0        0.2   12.0   0.0    2.8  3  AAA_19       AAA domain
        2.5    8.4   5.0        5.9    7.2   0.3    3.7  3  PAS_9        PAS domain
        8.7    6.2   9.1       0.38   10.7   0.4    3.3  3  NTPase_1     NTPase


Domain annotation for each model (and alignments):
>> Myosin_head  Myosin head (motor domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  862.0   3.1  1.4e-262  2.7e-259       1     677 []      93     758 ..      93     758 .. 0.97
   2 ?   -2.3   0.2      0.46   9.3e+02     498     574 ..     882     957 ..     877     962 .. 0.66
   3 ?   -6.6   6.7         9   1.8e+04     472     571 ..     961    1056 ..     897    1068 .. 0.62
   4 ?   -4.1   0.5       1.6   3.2e+03     496     533 ..    1199    1238 ..    1167    1286 .. 0.57

  Alignments for each domain:
  == domain 1  score: 862.0 bits;  conditional E-value: 1.4e-262
                  -SBGCGSSS-SHHHHHHHHHHHHHTT--EEEETTEEEEE--SS--STSSHHHHHHHTTS-GGGSSSSHHHHHHHHHHHHHHHTSEEEEEEESSTTSSH CS
  Myosin_head   1 vedlveLsllneasvlenlkkRykkdliYtysglvlvavnPykklkiysedvikaykgkkreelpPHifaiadeayrslledkenqsilisGEsGAGK 98 
                  v+d++eL++lne+sv++nl +Ry++dliYtysgl+lvavnPy++l+iy +d++k+y+ k+  e++PHif +ad ayr+lle++++qsil++GEsGAGK
   EPX73018.1  93 VNDMAELTCLNEPSVIHNLIQRYERDLIYTYSGLFLVAVNPYRSLPIYGDDMVKKYHAKQLPEVKPHIFRVADIAYRNLLEREQDQSILVTGESGAGK 190
                  68************************************************************************************************ PP

                  HHHHHHHHHHHHHHSSSSSCTCTTHHHHHHHHHHHHHHHHHEEEESSETTEESSEEEEEEEEETTSSEEEEEEEEECE-GGGGT---TT--SBHHHHH CS
  Myosin_head  99 teatKkvlqylasvaeskekveeeeleekilqsnPilEafGnAktvrndnssRFGKfieiefdakgkiagakietYLLEksRvvkqakeERnyHiFYq 196
                  te+tKkv+qyl++++++++ ++++ le+kil++nP+lEafGnA+tvrn+nssRFGKfi+ief+ +g+i+ga++ +YLLEksRv + +++ERnyHiFYq
   EPX73018.1 191 TETTKKVIQYLTAITGTST-NDSQLLENKILDTNPVLEAFGNAQTVRNNNSSRFGKFIRIEFSIDGSIVGANLDWYLLEKSRVTNPSPNERNYHIFYQ 287
                  ****************999.67899************************************************************************* PP

                  HHHCSTHHHHHHTT--.TCCGSTTTTTTSSSSBTTS-HHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHCTSSEEEECTTSSEEESSHHHHHHHH CS
  Myosin_head 197 llagaseeekkelkle.dvkdyaylsqsgeltvdgiddseefketkkaldilglseeeqkeifrivaailhlGniefkkeakdeqavledeeklekaa 293
                  ll g++ ++ +el le +v++y+yl ++    ++g+dd+ ef++++  l++lg+s++++k++f  +aa+lhlGnie+++++++ qa +++ +++++ +
   EPX73018.1 288 LLRGSDGDLLRELFLErSVDKYTYLRNC-AKFISGVDDALEFQQLCAGLTTLGFSSKDTKQLFIAIAAVLHLGNIEVASDRAG-QARFPSLTHIDQLC 383
                  ****************99*********6.678************************************************998.69999999****** PP

                  HHHTS-HHHHHHHHHSEEEEETTEEEEEE-BHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS-S-SEEEEEEEEE-B---SSB-HHHHHHHHHH CS
  Myosin_head 294 ellgvdaeelekalvkrriktgkevvskalnveqaevardalakaiyerlFdwlverinkslekkkeekksfiGvLDiaGFEifeknsFEqlcinyvn 391
                  +llg+ ae++ +a+++++ k+g+e++++a ++eq+  + ++lak +yer F +lv+++n+++ +++++++ fiGvLDiaGFEif +nsFEqlciny+n
   EPX73018.1 384 HLLGIPAESFINAVLHPKTKAGREWIVNARTKEQVLHTLQSLAKSLYERNFAFLVDKLNRTMYQTQNDNNCFIGVLDIAGFEIFAHNSFEQLCINYTN 481
                  ************************************************************************************************** PP

                  HHHHHHHHHHHCHHHHHHHHHTTSSGCGS-GGGCCHHHHHHHHS.SSTSHHHHHHHHHTSTTS-HHHHHHHHHHHHTTSTTEEETTSTTTTTEEEEEE CS
  Myosin_head 392 EkLqqlFnelvlklEqeeYvrEgiewkfidfgldnqaiidLiek.kplGilslLdeecllpkatdetfleklvkafskhakfeksrlkkgeakFiikH 488
                  EkLqq+Fn+ +++lEqeeY +E+iew+f+d+g d+q++id+iek +p+Gils Lde+c++p +td tf+ekl+   + +++  +++ + +++ F+++H
   EPX73018.1 482 EKLQQFFNHYMFVLEQEEYSQEKIEWNFVDYGNDLQPTIDIIEKsEPIGILSCLDEDCVMPMTTDVTFTEKLHLLLKGKTNIYRPK-RFSSEGFLLRH 578
                  ********************************************99******************************8888888887.59********* PP

                  TTCEEEEE-TTHHHHHH----HHHHHHHHTSSSHHHHHHCCSHCHB--.........CSSSECCCCCSBHHHHHHHHHHHHHHHHCTSEEEEEEEE-S CS
  Myosin_head 489 yAgkveYevegfleKnkDtlnedlvellksskkkllaelfkeeekeakaeakksekkkkkkkkkkkfktvgskfkeslaeLmktlestnphfvRCikp 586
                  yAg+v Y++eg+leKnkD+ln++l +l+++s++  +++lf +++         +  +  + +kk  f+tv+++++++l++Lmk+le+t+phfvRCi+p
   EPX73018.1 579 YAGNVVYSTEGWLEKNKDPLNSNLANLISQSSNMHVSSLFADYSS-------GNTLNGDQYEKKGIFRTVSQRHRRQLNTLMKQLEATQPHFVRCIIP 669
                  ******************************************765.......23334455667789******************************** PP

                  SSS--TT---HHHHHHHHHHTTHHHHHHHHHHSSSEEEEHHHHHHHHGGGSTTSS-SS.SSSHHHHHHHHHHHTTS-GCGEEECSSEEEET CS
  Myosin_head 587 nekkkakkldeslvleqlrclGvlegirirraGfpnRitfeefvqrYkllakkelkkllkedakkaveailkeleldkeeykiGktKiFfr 677
                  n+ kk+k+++++lvl+qlrc+Gvlegiri++ Gfpn+ +++ef++rY +l+k+ + k   ++ak+a+ ai+k+l+l+++ y++G+tK+Ff+
   EPX73018.1 670 NSIKKPKNIEKALVLHQLRCNGVLEGIRIAQTGFPNKLLYTEFRSRYGILSKTLA-KG-YTEAKEATVAIIKDLDLSTSVYRLGETKVFFK 758
                  **************************************************99887.55.48999**************************8 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.46
                  TTHHHHHH----HHHHHHHHTSSSHHHHHHCCSHCHB--.........CSSSECCCCCSBHHHHHHHHHHHHHHHHC CS
  Myosin_head 498 egfleKnkDtlnedlvellksskkkllaelfkeeekeakaeakksekkkkkkkkkkkfktvgskfkeslaeLmktle 574
                  e+ ++K k+ l e + + ++   ++ +++l ++ + ++++ ++  ++kk+++++ +k ++++ + +es+++L ++l 
   EPX73018.1 882 EQLISKEKEILVERANSRIEVI-NERVSDLVEQLRLSQEKYSALYNEKKETEEQLEKYRSLTNHLQESISTLQEKLD 957
                  6678888888877655544333.333445555545445556666677777777888889999999999999988875 PP

  == domain 3  score: -6.6 bits;  conditional E-value: 9
                   EEETTSTTTTTEEEEEETTCEEEEE.-TTHHHHHH----HHHHHH..HHTSSSHHHHHHCCSHCH.B--.........CSSSECCCCCSBHHHHHH CS
  Myosin_head  472 feksrlkkgeakFiikHyAgkveYe.vegfleKnkDtlnedlvel..lksskkkllaelfkeeek.eakaeakksekkkkkkkkkkkfktvgskfk 563 
                    e++++k++ ++F  +H   + +Ye  ++ l+  + t++e ++++  lk++k+kl ++++ +e+  +a        + +  k+++++ k+   ++ 
   EPX73018.1  961 TEEEETKRKFKEFESSHINLQADYEhYAQLLDSQRKTIEEVQTKAdgLKQTKNKLEEDILWKENSfNA--------AMDDLKSENSNLKSQCNTYE 1048
                   23334477888999999999999973468889999999875554333999999999987666444111........22222222333344444455 PP

                   HHHHHHHH CS
  Myosin_head  564 eslaeLmk 571 
                   +++a+L++
   EPX73018.1 1049 SQIADLVS 1056
                   55555554 PP

  == domain 4  score: -4.1 bits;  conditional E-value: 1.6
                   E-TTHHHHHH.----HHHHHHHHTSSS.HHHHHHCCSHCH CS
  Myosin_head  496 evegfleKnk.Dtlnedlvellksskk.kllaelfkeeek 533 
                   ++++ leKn  D +  + v++  ++k  +l+++l+ke+++
   EPX73018.1 1199 KTNDVLEKNAtDFIDLQSVKTRYECKVsELFSQLHKERKR 1238
                   3444555553244444444444444433555555555444 PP

>> Myosin_N  Myosin N-terminal SH3-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.9   0.2   2.1e-11   4.1e-08       2      39 ..      38      78 ..      37      79 .. 0.90
   2 ?   -2.0   0.0       1.7   3.3e+03      19      37 ..     854     872 ..     852     874 .. 0.82

  Alignments for each domain:
  == domain 1  score: 32.9 bits;  conditional E-value: 2.1e-11
                EEEEETTSTTS-EEEEEEEEES..SEEEEEE.TTSEEEEEE CS
    Myosin_N  2 klVWVpDpkegyvkGeIkeeeG..dkvtVet.edGktvtVk 39
                ++VW+ Dp+e y+k++I e+ +   ++ V++ +dG +++V+
  EPX73018.1 38 SWVWISDPEEVYLKAWIEEKLNsgSQYRVRLeKDGTERIVD 78
                8*****************88776466*************97 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 1.7
                 EEEESSEEEEEETTSEEEE CS
    Myosin_N  19 keeeGdkvtVetedGktvt 37 
                 + e+ ++v Ve+e +++++
  EPX73018.1 854 QLEKAESVSVELEANRQRI 872
                 5589999*****9999986 PP

>> ADIP  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1       3.8   7.6e+03      40      52 ..     107     119 ..     106     120 .. 0.91
   2 ?    1.0   0.1       0.2     4e+02     130     151 ..     835     856 ..     833     857 .. 0.91
   3 ?   -0.2  10.9      0.47   9.4e+02      55     128 ..     877     952 ..     867     957 .. 0.83
   4 !   10.0   8.0   0.00034      0.68      62     139 ..    1012    1093 ..    1008    1098 .. 0.82
   5 ?   -1.7   7.5       1.4   2.7e+03      60     102 ..    1157    1199 ..    1108    1202 .. 0.66
   6 ?   -3.9  12.6       6.5   1.3e+04      63     110 ..    1160    1207 ..    1139    1263 .. 0.58
   7 ?   -4.0   0.0       7.1   1.4e+04      70      89 ..    1398    1417 ..    1391    1451 .. 0.50
   8 ?   -3.1   1.4       3.7   7.4e+03      93     127 ..    1464    1498 ..    1433    1519 .. 0.64
   9 ?   -5.8  10.7         9   1.8e+04      62     126 ..    1559    1623 ..    1548    1649 .. 0.67
  10 ?  -10.1  16.1         9   1.8e+04      63     139 ..    1595    1671 ..    1572    1684 .. 0.52
  11 ?   -8.8  12.2         9   1.8e+04      48     128 ..    1664    1745 ..    1632    1754 .. 0.57
  12 ?   -0.7  13.6      0.69   1.4e+03      53     115 ..    1747    1809 ..    1738    1812 .. 0.92
  13 ?    2.8   4.0     0.056   1.1e+02      43     110 ..    1826    1893 ..    1817    1923 .. 0.86
  14 !   17.3   8.8   1.9e-06    0.0037      48     127 ..    1934    2010 ..    1931    2015 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 3.8
        ADIP  40 viysLlqardrdl 52 
                 vi+ L+q+ +rdl
  EPX73018.1 107 VIHNLIQRYERDL 119
                 8**********95 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.2
        ADIP 130 tqyahelkkkdreiekLkeklk 151
                 tq   +l++kd+ i+ Lk +l+
  EPX73018.1 835 TQTDEYLRRKDTLINNLKVQLE 856
                 89999*************9997 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.47
        ADIP  55 reslnetirkleaei..erlqskierlktqleqlerelalvqakerqlekklktleqklknekeelqrlknalqqi 128
                 +e+++e++ ++e ei  er +s+ie   +++++l  +l l+q+k   l  + k++e++l + +   + l+  + ++
  EPX73018.1 877 KELSEEQLISKEKEIlvERANSRIEVINERVSDLVEQLRLSQEKYSALYNEKKETEEQLEKYRSLTNHLQESISTL 952
                 78888888888888755899**************************999999999999998888777777766655 PP

  == domain 4  score: 10.0 bits;  conditional E-value: 0.00034
        ADIP   62 irkleaeierl....qskierlktqleqlerelalvqakerqlekklktleqklknekeelqrlknalqqiktqyahelkkk 139 
                   +kle +i  +    +++++ lk +++ l++++ +++++ ++l  ++ ++e+ l+++  e+   ++ l++ + q+a++lkk+
  EPX73018.1 1012 KNKLEEDILWKensfNAAMDDLKSENSNLKSQCNTYESQIADLVSNYSRTESELNKKESEILMFQKELAEYRDQLANSLKKR 1093
                  444444444330000456778************************************************************9 PP

  == domain 5  score: -1.7 bits;  conditional E-value: 1.4
        ADIP   60 etirkleaeierlqskierlktqleqlerelalvqakerqlek 102 
                   t  kl++ +  l+  +e lk ql++++re+  ++ + ++l+k
  EPX73018.1 1157 VTEDKLRSRNNELSDIVEALKYQLQEQDREIIEANTANANLQK 1199
                  3445566666666666677777777777777666666666666 PP

  == domain 6  score: -3.9 bits;  conditional E-value: 6.5
        ADIP   63 rkleaeierlqskierlktqleqlerelalvqakerqlekklktleqk 110 
                   kl++ +  l+  +e lk ql++++re+  ++ + ++l+k++  le+ 
  EPX73018.1 1160 DKLRSRNNELSDIVEALKYQLQEQDREIIEANTANANLQKTNDVLEKN 1207
                  455555666666666666666666666666666666666655544433 PP

  == domain 7  score: -4.0 bits;  conditional E-value: 7.1
        ADIP   70 erlqskierlktqleqlere 89  
                  ++l+s+i +l  +le+ +r 
  EPX73018.1 1398 TNLRSEIMKLNFNLEEAKRS 1417
                  33444444444444444433 PP

  == domain 8  score: -3.1 bits;  conditional E-value: 3.7
        ADIP   93 vqakerqlekklktleqklknekeelqrlknalqq 127 
                  +++  + l+ +l++  ++l++ ke l +l n+ ++
  EPX73018.1 1464 LNEVPARLQGDLRRHFDQLRQSKETLLKLLNITED 1498
                  44444556666666666666666666666665544 PP

  == domain 9  score: -5.8 bits;  conditional E-value: 9
        ADIP   62 irkleaeierlqskierlktqleqlerelalvqakerqlekklktleqklknekeelqrlknalq 126 
                  +rkle+ +++ +s+    + + e +e+ +  +q+++++l  +l + e+ + ++ +  +++++al 
  EPX73018.1 1559 MRKLESALSKYRSRLGEYQLRHENSESSIHKLQRAKTTLSNRLNERETYITELLDTHKKMETALL 1623
                  56666666666666666666777777777777777777777777777777777777766666553 PP

  == domain 10  score: -10.1 bits;  conditional E-value: 9
        ADIP   63 rkleaeierlqskierlktqleqlerelalvqakerqlekklktleqklknekeelqrlknalqqiktqyahelkkk 139 
                   +l++ +   ++ i  l +  ++ e+ l  ++ak+++ e  + + ++ l ++k+  ++l ++++++ t   ++l  +
  EPX73018.1 1595 TTLSNRLNERETYITELLDTHKKMETALLESNAKQKEFESLYHEKNNDLSELKQHREKLMKQIDEFNTVRVQDLEER 1671
                  22222222223333334444444444444555566666666666666666666666666666666655555555555 PP

  == domain 11  score: -8.8 bits;  conditional E-value: 9
        ADIP   48 rdrdleqreslneti.rkleaeierlqskierlktqleqlerelalvqakerqlekklktleqklknekeelqrlknalqqi 128 
                  r +dle+re   e + ++ + e+   + + e   +++ + ++ + +v+ +  +l++++ +l+    ++  e +rl++ +q++
  EPX73018.1 1664 RVQDLEERERKDELLfQRYQKELNGFKVQLEEEREKNLRIRQDNRHVHLEVGELRTRVDELILEKTGLVKETSRLQSEIQSM 1745
                  4445555554444332444455555555555555555555666666666666666666666666666666666666666665 PP

  == domain 12  score: -0.7 bits;  conditional E-value: 0.69
        ADIP   53 eqreslnetirkleaeierlqskierlktqleqlerelalvqakerqlekklktleqklknek 115 
                  +++++++  +r+ ++ + +l+s+ +   + +e l++e  ++ +++r+le+++++l+++l+n k
  EPX73018.1 1747 KAKNNTSVAHRTVQSQLLNLTSQLQEIREMNEHLRSEQNSLLNEKRTLEQNVQELTSQLNNSK 1809
                  578888999**************************************************9987 PP

  == domain 13  score: 2.8 bits;  conditional E-value: 0.056
        ADIP   43 sLlqardrdleqreslnetirkleaeierlqskierlktqleqlerelalvqakerqlekklktleqk 110 
                  +L ++ dr  e+ +sl ++++++e   +  q++ +   +++  l+r++ ++++++++le +l +l++k
  EPX73018.1 1826 DLRASMDRKDEMLTSLVDRMKQMEFFASETQKDSNLHREENLNLHRQIGVLENEKKELELRLFDLDAK 1893
                  5556788999999999999999999999999999999999999******9999999999999888765 PP

  == domain 14  score: 17.3 bits;  conditional E-value: 1.9e-06
        ADIP   48 rdrdleqreslnetirkleaeierlqskierlktqleqlerelalvqakerqlekklktleqklknekeelqrlknalqq 127 
                  rdr++++   l+++++k + e+ +l+++i+rl+++++ l ++l+  +a e++ + +l+++e+ +++e+e l  l+++l++
  EPX73018.1 1934 RDRNIRH---LEARLQKYDEEKHNLSASISRLEDRNSLLNSQLEDTKASETHYKLALQRAEHEVQEERENLGNLERDLEK 2010
                  5566655...56789999****************************************************9988887765 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   2.1e-05     0.041       3      29 ..     175     201 ..     173     221 .. 0.86
   2 ?   -0.5   0.4      0.71   1.4e+03      70     114 ..    1064    1126 ..    1012    1142 .. 0.65
   3 ?   -1.4   0.1       1.3   2.6e+03      89      89 ..    1253    1253 ..    1173    1312 .. 0.53
   4 ?   -2.1   0.1       2.1   4.3e+03      53      82 ..    1460    1493 ..    1427    1561 .. 0.51
   5 ?   -3.5   0.3       5.8   1.2e+04      46      78 ..    1762    1801 ..    1731    1815 .. 0.51

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2.1e-05
      AAA_22   3 ktagilvvtGesGtGKTtllrrlleql 29 
                 +++++++vtGesG+GKT + +++ + l
  EPX73018.1 175 EQDQSILVTGESGAGKTETTKKVIQYL 201
                 4889*****************998755 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.71
      AAA_22   70 a..........erlsseellealeqalraravielliiDEaqhlr......s..eealeeLrs 114 
                  +            +++ e++++l++ l++ra  e+l+ +Ea  l+      s   + l+ L++
  EPX73018.1 1064 ElnkkeseilmFQKELAEYRDQLANSLKKRASSEILVEEEALSLDsqentfSssSTTLSILKD 1126
                  344455556666678889999999999999997777777777776543322133444444444 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 1.3
      AAA_22   89 r 89  
                   
  EPX73018.1 1253 E 1253
                  1 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 2.1
      AAA_22   53 skdllrellralglelka....erlsseelleal 82  
                  +++ll+e+   l+ +l +     r+s+e ll++l
  EPX73018.1 1460 QEQLLNEVPARLQGDLRRhfdqLRQSKETLLKLL 1493
                  4455555555555555545554222222222222 PP

  == domain 5  score: -3.5 bits;  conditional E-value: 5.8
      AAA_22   46 tlpsstsskdllrellralglelka.......erlsseel 78  
                  +l ++ts+ +  re+ + l +e+++        +++ +el
  EPX73018.1 1762 QLLNLTSQLQEIREMNEHLRSEQNSllnekrtLEQNVQEL 1801
                  3334444444444444444444444333233333333333 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   9.2e-05      0.18      20      49 ..     172     202 ..     162     241 .. 0.76
   2 ?   -2.3   0.2       2.4   4.9e+03      86     117 ..     857     897 ..     788     955 .. 0.59
   3 ?   -2.5   0.1       2.8   5.6e+03     101     131 ..    1086    1153 ..    1044    1158 .. 0.57
   4 ?   -1.8   0.7       1.8   3.6e+03      80      80 ..    1179    1179 ..    1085    1306 .. 0.61
   5 ?   -0.4   0.2      0.67   1.3e+03      96     149 ..    1458    1505 ..    1417    1526 .. 0.57

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 9.2e-05
      AAA_16  20 rsgrp.elvllsGesGvGKsslvrellrale 49 
                  + +  +++l++GesG GK+   +++ ++l+
  EPX73018.1 172 LEREQdQSILVTGESGAGKTETTKKVIQYLT 202
                 33444489*************9999996655 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 2.4
      AAA_16  86 ldeaesaeleawrekleeala..avpelagaea............s 117
                 ++e+ s elea r+++ +  +  +      ++             +
  EPX73018.1 857 KAESVSVELEANRQRISKISKelS-----EEQLiskekeilveraN 897
                 233444444444444444444221.....11111112233333331 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 2.8
      AAA_16  101 leeala.....................................avpelagaeasrllellkrllalls 131 
                  l  +l+                                     + ++l+++ea++l + +k+  +ll+
  EPX73018.1 1086 LANSLKkrasseilveeealsldsqentfssssttlsilkdvqELKALHSKEATQLSDRIKDVTQLLE 1153
                  33332233333333333333333333444444445666666666677777777777776666665555 PP

  == domain 4  score: -1.8 bits;  conditional E-value: 1.8
      AAA_16   80 e 80  
                  +
  EPX73018.1 1179 Q 1179
                  1 PP

  == domain 5  score: -0.4 bits;  conditional E-value: 0.67
      AAA_16   96 awrekleealaavpelagaea.....srllellkrllallsrderp....lvlvlDdlqwade 149 
                  + +e+                      rl   l+r++++l++ +++    l ++ D l+ ad+
  EPX73018.1 1458 DEQEQ---------------LlnevpARLQGDLRRHFDQLRQSKETllklLNITEDKLHSADS 1505
                  22222...............0233337777777777766666444322224444455555555 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0      0.01        20       1      35 [.     180     215 ..     180     240 .. 0.77
   2 ?    0.7   0.0      0.34   6.8e+02      78     120 ..     641     683 ..     630     694 .. 0.69
   3 ?    1.2   0.3      0.23   4.5e+02      66      98 ..    1741    1772 ..    1737    1801 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.01
                 EEEESSTTSSHHHHHHHHHHHHT.HEEEEEETTTCS CS
         AAA   1 vllyGppGtGKTllakavakelg.vefleisgsell 35 
                 +l++G  G GKT + k v++ l  ++  +++ s+ll
  EPX73018.1 180 ILVTGESGAGKTETTKKVIQYLTaITGTSTNDSQLL 215
                 699*****************9853555666666666 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.34
                 CCHHHHHHHHHHHHHHHHTTTSSSTEEEEEEESS...GGGSTHHHH CS
         AAA  78 eseeeervvnqLlteldgvkkkeskvivigatnr...pdkldpall 120
                  s+ ++r +n+L+++l+  +    +++ +++ n+   p+++++al+
  EPX73018.1 641 VSQRHRRQLNTLMKQLEATQP---HFVRCIIPNSikkPKNIEKALV 683
                 366677888888888888877...4666666666556888888887 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.23
                  TGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTT CS
         AAA   66 EidalaksrsgseseeeervvnqLlteldgvkk 98  
                  Ei ++ k++ +++s  +++v++qLl+  +++++
  EPX73018.1 1741 EIQSMYKAK-NNTSVAHRTVQSQLLNLTSQLQE 1772
                  899999988.89999**********99888765 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0    0.0001       0.2       9      43 ..     176     210 ..     169     220 .. 0.86
   2 ?   -3.2   0.2       4.7   9.3e+03      49      91 ..    1089    1152 ..    1069    1185 .. 0.50
   3 ?   -3.5   0.4         6   1.2e+04      54      93 ..    1593    1636 ..    1580    1666 .. 0.44

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.0001
      AAA_19   9 kekvllvtaGpGtGKTrvlkhivallvelggvkpe 43 
                 +++ +lvt+  G GKT+++k+++++l +++g + +
  EPX73018.1 176 QDQSILVTGESGAGKTETTKKVIQYLTAITGTSTN 210
                 56789*********************999887765 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 4.7
      AAA_19   49 aftgrAakel..rerlaalgaeatTiHrlal...................ldfddlltealell 91  
                  ++ +rA +e+  +e+  +l+ + +T+ + ++                    ++ d++++  +ll
  EPX73018.1 1089 SLKKRASSEIlvEEEALSLDSQENTFSSSSTtlsilkdvqelkalhskeaTQLSDRIKDVTQLL 1152
                  5555555554223333355555555554433333333333333333333333333333333333 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 6
      AAA_19   54 AakelrerlaalgaeatTiHrlalldfddlltealelle...........e 93  
                  A   l++rl   +++ t i +l  ld+++++  + +lle           +
  EPX73018.1 1593 AKTTLSNRL---NERETYITEL--LDTHKKM--ETALLEsnakqkefeslY 1636
                  444444444...3333333344..4444444..444455323222222331 PP

>> PAS_9  PAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.1       0.4     8e+02      27      71 ..     898     940 ..     889     954 .. 0.86
   2 ?    7.2   0.3     0.003       5.9      10      61 ..    1184    1234 ..    1179    1259 .. 0.75
   3 ?   -3.7   0.0       7.4   1.5e+04      31      85 ..    1905    1962 ..    1900    1966 .. 0.57

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.4
       PAS_9  27 speevlgksitdlfvtdpeanerlraaleqgrkkerevevvlirk 71 
                 s+ ev++ +++dl+++   ++e+ +a++++++  e e++++ +r+
  EPX73018.1 898 SRIEVINERVSDLVEQLRLSQEKYSALYNEKK--ETEEQLEKYRS 940
                 5889**********999999999999999999..88888888876 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.003
       PAS_9   10 dgrilyaNeaalrllGyspeevlgksitdlf...vtdpeanerlraaleqgrkke 61  
                  d +i+ aN+a ++l  ++ ++vl k+ td++   + + + ++++++++ q+    
  EPX73018.1 1184 DREIIEANTANANL--QKTNDVLEKNATDFIdlqSVKTRYECKVSELFSQLH--K 1234
                  678***********..99*************888666666666666666666..2 PP

  == domain 3  score: -3.7 bits;  conditional E-value: 7.4
       PAS_9   31 vlgksitdlf..vtdpeanerlraaleqgrk.kerevevvlirkngetfwvlltaspv 85  
                  +l+k+i +l   v d+++++ +     ++r+ + r+ e  l++ ++e+    +++s++
  EPX73018.1 1905 MLQKQIAELEssVADADNERIKGLDECRLRDrNIRHLEARLQKYDEEKHNLSASISRL 1962
                  5666777776653333333333333333333668888888888888776666666665 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.4   0.00019      0.38       2      35 ..     180     209 ..     179     219 .. 0.84
   2 ?   -1.7   0.4       1.2   2.4e+03     102     160 ..    1613    1673 ..    1552    1680 .. 0.55
   3 ?   -3.5   0.1       4.2   8.3e+03      65     113 ..    1804    1854 ..    1772    1858 .. 0.66

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00019
                 EEEE--TTSSHHHHHHHHHHHH...GGGEEEEEE CS
    NTPase_1   2 vfiTGppGvGKtTlvkkvlellkssgvkvgGfyt 35 
                 +++TG++G GKt   kkv++ l      ++G  t
  EPX73018.1 180 ILVTGESGAGKTETTKKVIQYL----TAITGTST 209
                 89******************99....45566555 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.2
                  ---STTG...GG-HHHHHHHHHHHTTTSEEEEE--SS--SHHHHHHHT-TT-EEEE--TTTT CS
    NTPase_1  102 DEiGkmE...lkskkfkeaveevLksekpvlavihrrkdlalveeirerkdvkvfevteenr 160 
                  D   kmE   l+s+  +++ e + +++++ l  ++++ +++l+++i e + v+v ++ e++r
  EPX73018.1 1613 DTHKKMEtalLESNAKQKEFESLYHEKNNDLSELKQH-REKLMKQIDEFNTVRVQDLEERER 1673
                  4444455322344555555555555666666666666.667777777777777777776666 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 4.2
                  ---SSEETTEEE-HHHHHHHHHHHHHHHHHHH-...EEEE---STTGGG-HH CS
    NTPase_1   65 akreprvgkyvvdvesfeelalealrkalsead...viviDEiGkmElkskk 113 
                  + ++ + ++y  d+ + e+  ++ lr ++ ++d     ++D   +mE+++ +
  EPX73018.1 1804 QLNNSKSSEYSPDLADTERE-IADLRASMDRKDemlTSLVDRMKQMEFFASE 1854
                  55677888888898888876.5556666655555656678888888888766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2039 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2737  (0.152658); expected 358.6 (0.02)
Passed bias filter:                      571  (0.0318478); expected 358.6 (0.02)
Passed Vit filter:                       181  (0.0100954); expected 17.9 (0.001)
Passed Fwd filter:                        82  (0.0045736); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 2.84u 0.41s 00:00:03.25 Elapsed: 00:00:00.77
# Mc/sec: 8025.86
//
Query:       EPX73019.1  [L=474]
Description: vacuolar serine protease Isp6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.8e-42  143.5  11.8    1.4e-41  142.7  11.8    1.3  1  Peptidase_S8  Subtilase family
    6.3e-14   52.4   0.7    1.3e-13   51.4   0.7    1.6  1  Inhibitor_I9  Peptidase inhibitor I9


Domain annotation for each model (and alignments):
>> Peptidase_S8  Subtilase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.7  11.8   1.5e-45   1.4e-41       1     282 [.     218     453 ..     218     468 .. 0.91

  Alignments for each domain:
  == domain 1  score: 142.7 bits;  conditional E-value: 1.5e-45
                   -TT-EEEEECS-B-TT-TTTGGGEEE..EEEE---TTSG.GGEETT-SS-TT-SC-SSS....HHHHHHHHHH-B..SSSSSB-SSTTSEEEEEE-S CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_S8   1 gkgvlvavlDtGvdpshpdlsvttdgerklvdvideegagfngadsettstnwarddngnsieHGthvAGiaaanapeegekngvapgakilsvkvl 97 
                   g+gv+  v+DtGv+ +h++++                    ++a+  +t++ +++d++gn   HGthvAG++a        + gva +aki++vkvl
    EPX73019.1 218 GEGVTAYVVDTGVNVHHVEFE--------------------GRAKWGKTIPAHDADEDGNG--HGTHVAGTIASR------AYGVAKKAKIIAVKVL 286
                   6788889************99....................789999**********9987..**********99......9*************** PP

                   STTSB-HH..HHHHHHHHHHHHCT-S.........EEEE-EESCETTCHHCHHHHHHHHHHHH.CCT-EEEEE--SS-T-HHEEE-TTCEECTTTST CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_S8  98 dtsggsmetgteliraieeaaedkvd.........vinmslgestslpktgrsiealainravnkkgvlvviSaGNngktgsslqagspvgtpstsk 185
                     +g+ +   +++i+++e+ ++d+           v nmslg + s + + +     a++ av kkg+l+ ++aGN+        + + +++p+ sk
    EPX73019.1 287 RSNGSGSM--SDVISGVEWTVKDHLAqsksgkktaVANMSLG-GGS-SFVLDF----AVDSAV-KKGILYAVAAGNEY-------DDACYSSPAASK 367
                   88887764..9***********88888***************.333.333332....9*****.9*************.......778899****** PP

                   TCEEEEEESTTSSB-TT--B-TT.......-EEEE-S-CCCCCCCCCHHHTTTHHEEEE-SHHHCHHHHHHHHHHHHHHHTT--HHHHHHHHHCCS- CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_S8 186 nvitvgayttegkiapfSsrGpssdgklkpdivapGgnivstwsrqsnnsaglssyqsmsGTSmAsPnaagaaAlllsalpkltpetvraallntAq 282
                    +itv+a ++++++a+fS++G+++      di apG+ni+stw   +n++     ++++sGTSmA+P++ag aA  l  +p+ + ++v++al++  +
    EPX73019.1 368 LAITVAASNVNDQLAYFSNYGKCV------DIIAPGVNILSTWIGSNNHN-----TNTISGTSMATPHVAGLAAYYLGLHPDASSTDVKSALIKEST 453
                   ***********************9......6****************888.....99************************************9885 PP

>> Inhibitor_I9  Peptidase inhibitor I9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.4   0.7   1.4e-17   1.3e-13       2      81 ..      92     181 ..      91     182 .. 0.87

  Alignments for each domain:
  == domain 1  score: 51.4 bits;  conditional E-value: 1.4e-17
                   EEEEE-TTS-HHHHHHHHHHHHH....H......HHHTT.......--EEEEEEESS...SSSEEEEEE-GGGHHHHHTSTTEEEEEEEEEEEE CS
  Inhibitor_I9   2 YIVtfkeaakaakkassheswhqsllks......vlkge.....dsakagilysYki...lfnGfavklteeqaeklrkrpeVesVepDqsvrl 81 
                   YI+ +++  ++++   +h+sw+  ++++      +         ++   g+++ Y+    +f+G+a++++++++e++r +p+V +Ve+Dq+v +
    EPX73019.1  92 YIIILDSSISEQE-LHEHTSWVEGVHQEnvmqanS---YygpedSNYMFGLKHVYDFgesAFKGYAGQFSADVVEQIRLHPHVIAVERDQVVNI 181
                   *******766666.*********998887655542...04467889999******************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (474 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       415  (0.0231469); expected 358.6 (0.02)
Passed bias filter:                      302  (0.0168442); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 3281.20
//
Query:       EPX73020.1  [L=424]
Description: protein phosphatase 2C Ptc4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-42  145.4   0.0    7.3e-41  140.5   0.0    2.0  1  PP2C      Protein phosphatase 2C
  ------ inclusion threshold ------
       0.19   11.6   0.1        0.3   11.0   0.1    1.3  1  SpoIIE    Stage II sporulation protein E (SpoIIE)


Domain annotation for each model (and alignments):
>> PP2C  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.5   0.0   8.1e-45   7.3e-41      32     258 .]     124     390 ..     101     390 .. 0.86

  Alignments for each domain:
  == domain 1  score: 140.5 bits;  conditional E-value: 8.1e-45
                 CCCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHCHTTH.................................HHHHHHHHHHHHHHHHHHHHHHHHC.H CS
        PP2C  32 ssvsffavfdghggseaakyarehleeilksqksfeele.................................kleqalrksfladtdeelksskant.e 96 
                 +s  ++++fdghgg e++++ +++l  ++ ++++f+  e                                   ++ l+ sfl++  + lk +++ +  
  EPX73020.1 124 DSPFVYGIFDGHGGVECSEFLSNRLG-HIIEKQDFSRAEellqearslggymssleppfslasvlksrdedmIWRARLYYSFLEADLIYLKEHAKLSpD 221
                 5677899******************9.555566666666699999*********************99888767899*******445555554555445 PP

                 CCT-EEEEEEEEEETTE...........EEEEEESS-EEEEEETTEEE.EECS---STTSHHHHHHHHHTT--EEE...CCEEETTTBSBSB-EE-GGG CS
        PP2C  97 psksGstavvalirgtk...........lyvAnvGDSravLcrkgnak.keltedHkpsdedEreRIeeaggsvsn...gegrvngsLavsRalGDlel 180
                     G++ +v+++++++           +++A+vGD+ra+Lc++++ + ++lt++H p+d +E +R++ ++  +s    ge+r  ++ a++R++GD   
  EPX73020.1 222 RAVPGAVGTVVVLTSKNnksywesdsytIQLAHVGDTRAILCDSRTGRaHRLTFQHNPADFEESQRLRHYNVGFSSdsfGEKRYAWV-ANTRSFGDGLK 319
                 55566666666666655566**************************999**********************99999999999****9.********877 PP

                 TCCCCCCSTSB---EEEEEEE-TT.EEEEEEE-HHHHTTSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCCHHCHC CS
        PP2C 181 kpketeeqlvsaePdvtsvkltee.defliLacdGlwdvlsdqeavdlvrdelekkkspeevaeelvdeaiargsedni 258
                  +    +  v+aeP++ts+++ ++ ++fl L +dG+++v+sd+e+vd+++  ++    p+++a++++++a++ gs d+i
  EPX73020.1 320 LK----KLGVVAEPQLTSIHSLKDdWSFLTLLSDGVTQVVSDDEVVDIIKLSES----PQDAANNIIRYAQNVGSVDDI 390
                 76....68*********66666666***************************99....9****************9976 PP

>> SpoIIE  Stage II sporulation protein E (SpoIIE)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   3.4e-05       0.3     125     192 ..     342     397 ..     313     398 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 3.4e-05
                 EEEEEESCCCCSSSHHHHHHCCCHHCHHHHCT.....HCCHHHHHHHHHHHHTTSSSSS-EEEEEEEE CS
      SpoIIE 125 dtlllyTDGvtEardsdgelfgkerllallasaegesleelldalveellelgsgeleDDitllvlrv 192
                 + l l +DGvt   ++d+      + ++l +     s+++ ++++++ +++ g     DDit lv+r+
  EPX73020.1 342 SFLTLLSDGVTQVVSDDEVV----DIIKLSE-----SPQDAANNIIRYAQNVG---SVDDITCLVIRL 397
                 6799*******999666666....5555555.....5*************966...99********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (424 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       414  (0.0230911); expected 358.6 (0.02)
Passed bias filter:                      407  (0.0227007); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 3118.70
//
Query:       EPX73021.1  [L=144]
Description: hypothetical protein SOCG_00779 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-36  125.2   0.0    1.8e-36  124.8   0.0    1.2  1  UPF0047   Uncharacterised protein family UPF0047
  ------ inclusion threshold ------
       0.11   12.1   0.0        1.1    8.8   0.0    1.9  2  RE_LlaMI  LlaMI restriction endonuclease


Domain annotation for each model (and alignments):
>> UPF0047  Uncharacterised protein family UPF0047
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.8   0.0     2e-40   1.8e-36       3     115 .]      24     139 ..      22     139 .. 0.92

  Alignments for each domain:
  == domain 1  score: 124.8 bits;  conditional E-value: 2e-40
                 HHHHHHHHHH.HT.SEEEEEEEESSSSEEEEEEESSSHHHHHHHHHHHHHHSTTT.T-GGGTTS..THHHHHHHHHH-SEEEEEEETTEE---TTEEEE CS
     UPF0047   3 teeveeavke.sgvkeGlvlvfsrhttasltinEnadpdvqeDleealeklvpee.eYrhnaegpdnadaHlkssllgssltipvedgklalGtwqsiy 99 
                 t+e+ + + e ++++ G++++f++ht+a+ltinEn+d+d +eDl+++++k+vpe+ +Yrhnaeg d+++aH kssl+g+sltip+++g+l+lGtwq+i 
  EPX73021.1  24 TSELTSKLPEiKNFSMGTLNLFIQHTSAALTINENWDSDTREDLRDIMDKVVPEShSYRHNAEGLDDMPAHAKSSLIGPSLTIPISNGQLNLGTWQDIQ 122
                 55555555555899************************************************************************************* PP

                 EEESS.-SSEEEEEEEE CS
     UPF0047 100 lveld.gpreRkvvvqv 115
                 l+e+   p +R++v+++
  EPX73021.1 123 LAEFRrSPHSRTIVCTI 139
                 ****866677***9875 PP

>> RE_LlaMI  LlaMI restriction endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.0   0.00012       1.1      93     146 ..      16      73 ..      11      80 .. 0.79
   2 ?    1.2   0.0     0.025   2.3e+02      33      59 ..      93     119 ..      80     123 .. 0.89

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00012
    RE_LlaMI  93 rdknryswsGevc...ikiknsnrsGqilrieenkd.isiiynfsedkrqnkkevidv 146
                 r+k+ y  + e +   ++ikn++   + l i++++  ++i  n++ d+r++ ++++d 
  EPX73021.1  16 RTKGFYIVTSELTsklPEIKNFSMGTLNLFIQHTSAaLTINENWDSDTREDLRDIMDK 73 
                 5667777777765222678999999999*9*99875278999************9986 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.025
    RE_LlaMI  33 netkadllGyelkietssgkisfGdwa 59 
                  ++k++l+G  l i  s+g++++G w 
  EPX73021.1  93 AHAKSSLIGPSLTIPISNGQLNLGTWQ 119
                 567899********************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       357  (0.0199119); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.28s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 1014.06
//
Query:       EPX73022.1  [L=514]
Description: alpha-amylase Mde5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      3e-48  165.1   0.0    7.4e-48  163.8   0.0    1.6  1  Alpha-amylase  Alpha amylase, catalytic domain
    4.4e-08   33.3   0.0    6.2e-07   29.6   0.0    2.4  2  DUF1966        Domain of unknown function (DUF1966)


Domain annotation for each model (and alignments):
>> Alpha-amylase  Alpha amylase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.8   0.0   8.3e-52   7.4e-48       1     337 []      62     362 ..      62     362 .. 0.86

  Alignments for each domain:
  == domain 1  score: 163.8 bits;  conditional E-value: 8.3e-52
                    --CHHHHCTCCCCCCCT-SCEEE-B-CE.......-S-TTTTSS-SCECCE-CCC--CCCCCCHHHHHHCTT-EEEEEE--SC--TTSCCCHCCHH CS
  Alpha-amylase   1 GDLkGiiekLdYlkeLGvtaiwlsPifk.......spqadhgYdiadytkidpefGtnedlkeLiskahekgikvilDlVvNHtsdehewfkeslk 89 
                    G ++Gii+kLdY+++LG+taiw+sP+ k       + +a+hgY+ +d  +++ +fGt edl  L +++he+g+++++D VvNH +       +   
     EPX73022.1  62 GNWRGIINKLDYIQNLGFTAIWISPVIKniegrtkYGEAYHGYWPQDLLTLNHHFGTEEDLIDLADALHERGMYLMVDTVVNHVAAPDTRNIDFSM 157
                    89*********************************999*********************************************9876653332222 PP

                    STTSGGGCCC-E......ESS-STTC-TTTTCSCEECTTTTCEEESSS-TTS-BB-TTTCCCCCCCCCCCCCCCTTT.-SEEEETTCCCTTTCCCC CS
  Alpha-amylase  90 kkgepkrdyyiwkegkeekeppnnwkslfdgsaweydekaqeyylhlflkklpdLnteneevrkelkdvvkfwlekg.idGfRlDvvkhvskveal 184
                         ++ +       ee+ +p +     d+ + e ++ +       +  +lpd +ten+ + + l++ ++  ++k+ idG+R+D++khv +    
     EPX73022.1 158 -----YSPFNK-----EEHYHPMCPIIQSDPLSLEQCWIGT------EDVTLPDVDTENPFIIETLYNFIHDHVKKFkIDGLRIDAAKHVRQ---- 233
                    .....222222.....2334455555455666777555554......699******************7777777766**************.... PP

                    HCCHCCHHHHHHHHHHHTCCGTT-EEEEE-TT-SCCCHCCCC-CGG-SICECCITTCGGGCC-CTSTTSB-SS-HHHHHHHHHHHHHHS-CCCTTC CS
  Alpha-amylase 185 esngeflheftqalnetvasrkevmtvgEvssdasedlrvyttearlelemvldfphldvaqkakikeqlksisakklkellkkwlkaleeaaeea 280
                         f+  f +a+         v++ gE + ++   ++ +  ++ ++     +fp ++va++a      ++  ++k + +++ +++++ + ++  
     EPX73022.1 234 ----TFWPGFCEAAG--------VYCQGEEWTGEA--AAFCEWQGFMDGL--HNFPVQGVASEAV--IPVNDRALRKTAIAMNLVAHHCID-STLL 310
                    ....*********99........7899*9999555..7999*******99..9********9999..555566699999999999999999.9*** PP

                    EEES--TTS--HHHHTTSSTTTTHHHHHHHHHCCCTSSSEEEEETTCCCT----STT CS
  Alpha-amylase 281 vtflgnHDqeRilsrlgddsaeaekklklaaillltlrGvpviYyGeEigmtggkdp 337
                     +fl++ D +R++   +d +      lk+a++l l+++G+p+++yG+E+ + g +dp
     EPX73022.1 311 GLFLESQDAPRLAALNNDFN-----VLKNAMTLNLMSDGIPIVFYGQEQMLDGSHDP 362
                    ***********998877777.....8*************************999886 PP

>> DUF1966  Domain of unknown function (DUF1966)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0     0.072   6.4e+02      70      84 ..     341     355 ..     332     360 .. 0.80
   2 !   29.6   0.0     7e-11   6.2e-07       5      90 .]     413     488 ..     409     488 .. 0.92

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.072
     DUF1966  70 mekGePrvlvpkskl 84 
                 m+ G P v++ ++++
  EPX73022.1 341 MSDGIPIVFYGQEQM 355
                 889*******99987 PP

  == domain 2  score: 29.6 bits;  conditional E-value: 7e-11
     DUF1966   5 dkstlalrKgpegsqvvtvlsnkGssgssytlslkssgyaagtevvdvlsCksvtvdssgeltvtmekGePrvlvpksklegsglC 90 
                 +++ +++ Kgp    v+t ++n Gs  ++y l+++     a++ +vd+l+C+ + v+++  l+ t+++GeP++l+p +     g C
  EPX73022.1 413 GDNLMLMYKGP----VITFITNYGSVNKEYILKMP-----ASEPMVDLLTCTLIEVENE-ILKTTIQRGEPKILYPYKLTMRDGFC 488
                 567899*****....*******************9.....99**************865.8***************9998888888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (514 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       374  (0.0208601); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.24s 00:00:00.85 Elapsed: 00:00:00.46
# Mc/sec: 3388.99
//
Query:       EPX73023.1  [L=399]
Description: ribosome biogenesis protein Sqt1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.9e-31  105.6  10.0    3.2e-08   34.1   0.3    7.7  8  WD40         WD domain, G-beta repeat
    1.1e-20   73.7   0.2    2.3e-05   24.6   0.0    4.7  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    1.3e-10   41.1   0.1     0.0011   18.4   0.0    3.4  4  WD40_like    WD40-like domain
    4.9e-05   23.3   0.1     0.0088   15.9   0.2    2.4  2  eIF2A        Eukaryotic translation initiation factor eIF2A
    0.00088   17.4   0.4     0.0016   16.6   0.1    1.4  1  IKI3         IKI3 family
  ------ inclusion threshold ------
      0.035   13.7   1.0        6.4    6.3   1.2    3.7  3  PQQ_2        PQQ-like domain
       0.21   11.6   0.0       0.33   10.9   0.0    1.3  1  DUF1361      Protein of unknown function (DUF1361)


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.2   0.00064       1.6       9      38 .]      59      90 ..      52      90 .. 0.75
   2 !   34.1   0.3   1.2e-11   3.2e-08       3      38 .]      96     132 ..      94     132 .. 0.89
   3 !    9.2   0.0   0.00091       2.3      14      34 ..     150     170 ..     138     172 .. 0.84
   4 ?   -1.7   0.0       2.5   6.3e+03       3      11 ..     180     189 ..     178     218 .. 0.56
   5 ?    2.0   0.1      0.17   4.5e+02      13      36 ..     246     269 ..     225     271 .. 0.76
   6 !    9.3   0.0   0.00083       2.1       8      38 .]     283     313 ..     275     313 .. 0.85
   7 !   17.4   0.0   2.4e-06    0.0061      10      38 .]     325     354 ..     318     354 .. 0.86
   8 !   22.7   0.0     5e-08   0.00013       1      38 []     358     396 ..     358     396 .. 0.93

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00064
                SS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS
        WD40  9 GH.ssvtslafspdgawl.asGsdDgtvriWd 38
                 H +sv +++ +p ++ l +sG+ D   +iWd
  EPX73023.1 59 EHkDSVFCVSMNPVKSNLcVSGGGDDLAYIWD 90
                59667*****66666665269977*******9 PP

  == domain 2  score: 34.1 bits;  conditional E-value: 1.2e-11
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++  ltGH +sv s+ +s dg+++a+G++D+ +r+W+
  EPX73023.1  96 QVCQLTGHkDSVVSVGWSFDGNYVATGGMDNQIRVWK 132
                 667799**77799***********************6 PP

  == domain 3  score: 9.2 bits;  conditional E-value: 0.00091
                 EEEEEETTSSEEEEEETTSEE CS
        WD40  14 tslafspdgawlasGsdDgtv 34 
                   l ++p g +la+G+ Dg+v
  EPX73023.1 150 VWLNWHPKGLFLAAGCNDGSV 170
                 4578***************98 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 2.5
                 EEEEEESS.S CS
        WD40   3 clrtltGH.s 11 
                  ++++ GH  
  EPX73023.1 180 VVQVFYGHtA 189
                 5667777732 PP

  == domain 5  score: 2.0 bits;  conditional E-value: 0.17
                 EEEEEEETTSSEEE.EEETTSEEEE CS
        WD40  13 vtslafspdgawla.sGsdDgtvri 36 
                  ts++ ++dg+ l+  Gs  g+v++
  EPX73023.1 246 WTSFDSNSDGNVLFlGGS-SGKVKV 269
                 689999999999853666.999998 PP

  == domain 6  score: 9.3 bits;  conditional E-value: 0.00083
                 ESSSSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   8 tGHssvtslafspdgawlasGsdDgtvriWd 38 
                 t H sv s++ +p  +  a++s Dgtv ++d
  EPX73023.1 283 TQHESVESISLCPTLPICACASVDGTVALYD 313
                 36788************9999******9998 PP

  == domain 7  score: 17.4 bits;  conditional E-value: 2.4e-06
                 S.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  10 H.ssvtslafspdgawlasGsdDgtvriWd 38 
                 H ++v ++af p++++l++++ D+ +r Wd
  EPX73023.1 325 HgQPVIDCAFLPNSPYLLTACADCIIRKWD 354
                 545888***********99988*******9 PP

  == domain 8  score: 22.7 bits;  conditional E-value: 5e-08
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 gq+l+++tGH  ++ ++++  dg+ ++sGsdD  + ++d
  EPX73023.1 358 GQLLGEYTGHqEPILCMSVTADGKRVISGSDDTELLVFD 396
                 6899******888*******************9998887 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.1   4.5e-06     0.012      26      72 ..      94     138 ..      84     148 .. 0.83
   2 !   24.6   0.0   8.9e-09   2.3e-05      34      77 ..     142     185 ..     137     193 .. 0.88
   3 !   12.4   0.0   5.8e-05      0.15      42      87 ..     247     291 ..     233     294 .. 0.85
   4 !   16.3   0.0   3.6e-06    0.0091       2      88 ..     292     375 ..     291     379 .. 0.92

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 4.5e-06
  ANAPC4_WD40  26 gqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkv 72 
                  g++v +l  ++++ +v s+ W+ dg+  a +  d+++r+ + esg  
   EPX73023.1  94 GEQVCQL--TGHKDSVVSVGWSFDGNYVATGGMDNQIRVWKTESGVE 138
                  4556666..789999****************************9954 PP

  == domain 2  score: 24.6 bits;  conditional E-value: 8.9e-09
  ANAPC4_WD40  34 edkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhsls 77 
                  ++++  e+  L+W+p+g +La +++dg+v +l++ sgkvv+ + 
   EPX73023.1 142 ATETTDEIVWLNWHPKGLFLAAGCNDGSVWMLSMPSGKVVQVFY 185
                  467888999*******************************9875 PP

  == domain 3  score: 12.4 bits;  conditional E-value: 5.8e-05
  ANAPC4_WD40  42 rsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtcl 87 
                  +s+  + dg++L  + s g+v+++++++  ++ sl++++e+ v ++
   EPX73023.1 247 TSFDSNSDGNVLFLGGSSGKVKVVNINNNYILASLETQHES-VESI 291
                  5566689*****************************99985.7665 PP

  == domain 4  score: 16.3 bits;  conditional E-value: 3.6e-06
  ANAPC4_WD40   2 swcptmDLiAlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclg 88 
                  s cpt  + A a+ dg ++++  +  +        +++ v + a+ p+   L  a++d  +r  d+ sg+++ +++ ++e  + c++
   EPX73023.1 292 SLCPTLPICACASVDGTVALYDSSSLKFRRS--LYHGQPVIDCAFLPNSPYLLTACADCIIRKWDVRSGQLLGEYTGHQEP-ILCMS 375
                  78*******************9998886666..7999**************************************999995.99996 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.0   0.00067       1.7       4      46 ..      65     108 ..      62     111 .. 0.86
   2 !   18.4   0.0   4.2e-07    0.0011       5      76 ..     109     181 ..     107     184 .. 0.90
   3 !   11.9   0.1   4.1e-05       0.1       5      68 ..     248     312 ..     247     320 .. 0.85
   4 ?   -3.2   0.0       1.6   4.1e+03      48      91 ..     332     377 ..     327     396 .. 0.51

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.00067
   WD40_like   4 Ysidisk.kgslilyGgkddkctvlkleslesvsivesfedSvi 46 
                 + + +++ k++l + Gg dd + + ++ ++e+v  +++ +dSv+
  EPX73023.1  65 FCVSMNPvKSNLCVSGGGDDLAYIWDITTGEQVCQLTGHKDSVV 108
                 5566664389999*****************************97 PP

  == domain 2  score: 18.4 bits;  conditional E-value: 4.2e-07
   WD40_like   5 sidiskkgslilyGgkddkctvlkleslesvsivesfedSvifvklldddlilvv.tlDGtillslleneeev 76 
                 s+  s++g++++ Gg d++++v k+es+ +    ++ +d +++ +   + l+l +  +DG + +  +  +++v
  EPX73023.1 109 SVGWSFDGNYVATGGMDNQIRVWKTESGVEFITATETTDEIVWLNWHPKGLFLAAgCNDGSVWMLSMPSGKVV 181
                 8899**********************************************99986368**9988888877766 PP

  == domain 3  score: 11.9 bits;  conditional E-value: 4.1e-05
   WD40_like   5 sidiskkgslilyGgkddkctvlkleslesvsivesfedSvifvkllddd.lilvvtlDGtills 68 
                 s d + +g+++  Gg + k++v++++++ +  ++e  ++Sv  + l        ++++DGt+ l+
  EPX73023.1 248 SFDSNSDGNVLFLGGSSGKVKVVNINNNYILASLETQHESVESISLCPTLpICACASVDGTVALY 312
                 5689999***********************99999999999988888776466788999998654 PP

  == domain 4  score: -3.2 bits;  conditional E-value: 1.6
   WD40_like  48 vkllddd.lilvvtlDGtillsllenee.evenekieedistvkvi 91 
                 + +l +   +l +  D  i + +++ ++   e +  +e i +++v+
  EPX73023.1 332 CAFLPNSpYLLTACADCIIRKWDVRSGQlLGEYTGHQEPILCMSVT 377
                 5566555344455556666555555555333344445555544444 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.2   3.4e-06    0.0088      60     159 ..      62     162 ..      49     186 .. 0.81
   2 !    4.8   0.0    0.0087        22     117     163 ..     299     346 ..     247     364 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 3.4e-06
                 S.EEEEEE-TTSS-EEEEESSSSCEEEEEECS.CEEEEEEEEES--..EEEE-TTSSEEEEE-TTSSS-EEEEEETT.TTEEEEEEE-TT.--EEEE-T CS
       eIF2A  60 gpihdvaWspkskefaviyGkmpakvslfdlk.vkviskleeqkrN..tiffspkgklvllaGfgnlaGeleiwdvk.kkkkiakaeaan.atlvewsp 153
                   + +v+ +p +++++v  G  +  ++++d + ++++++l  +k    ++ +s  g++v+++G+ n    + +w+++  ++ i+ +e ++  + ++w+p
  EPX73023.1  62 DSVFCVSMNPVKSNLCV-SGGGDDLAYIWDITtGEQVCQLTGHKDSvvSVGWSFDGNYVATGGMDNQ---IRVWKTEsGVEFITATETTDeIVWLNWHP 156
                 45778888888888886.566677899999965999999987766511678*************996...******9778888777766426889**** PP

                 TSSEEE CS
       eIF2A 154 dgryvl 159
                 +g +++
  EPX73023.1 157 KGLFLA 162
                 **8875 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.0087
                 EE-TTSSS-EEEEEETTTTEEEEEEE-TT--.EEEE-TTSSEEEEEE- CS
       eIF2A 117 laGfgnlaGeleiwdvkkkkkiakaeaanat.lvewspdgryvlTatt 163
                 ++   ++ G+++++d +++k   ++ + + + ++ + p++ y+lTa  
  EPX73023.1 299 ICACASVDGTVALYDSSSLKFRRSLYHGQPViDCAFLPNSPYLLTACA 346
                 45556789*********9999988877765428************975 PP

>> IKI3  IKI3 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.1   6.2e-07    0.0016     204     272 ..      99     163 ..      88     181 .. 0.83

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 6.2e-07
                 XXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXX CS
        IKI3 204 kls.lddskvtIsWRGDgeYfavssleaetgerralrvyeregaLdsvse.kvdgleeaLaWrPsGsliAs 272
                 +l+   ds v++ W  Dg+Y+a+  +        ++rv++ e  ++ +   +++     L+W P+G  +A+
  EPX73023.1  99 QLTgHKDSVVSVGWSFDGNYVATGGM------DNQIRVWKTESGVEFITAtETTDEIVWLNWHPKGLFLAA 163
                 56778899***************999......457*******88777665455555579********9997 PP

>> PQQ_2  PQQ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.3     0.034        86       9      56 ..      90     136 ..      39     183 .. 0.64
   2 ?    6.3   1.2    0.0025       6.4      32      98 ..     199     224 ..      81     290 .. 0.57
   3 ?   -1.4   0.0      0.55   1.4e+03       9      52 ..     354     396 ..     348     398 .. 0.55

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.034
       PQQ_2   9 daatGaelWrvdlarplgggvsravlsggtlfvatgggrlvaldaatG 56 
                 d +tG+++ +++ ++++   v + + +g+++++++  +++  +++++G
  EPX73023.1  90 DITTGEQVCQLTGHKDSVVSVGWSF-DGNYVATGGMDNQIRVWKTESG 136
                 3334444444433333333333344.4444444444444444444444 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0025
       PQQ_2  32 avlsggtlfvatgggrlvaldaatGkvlWettlegpvvgaplvaegrvvvvasdgqlialdaedGkr 98 
                 +   g++l++++++g+l+ +++atG                                        + 
  EPX73023.1 199 PG-VGKRLATVDDMGTLIVWNPATG----------------------------------------DS 224
                 22.3444444444444444444444........................................33 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 0.55
       PQQ_2   9 daatGaelWrv.dlarplgggvsravlsggtlfvatgggrlvald 52 
                 d ++G++l +  ++++p+ +++   + +g++++++++  +l  +d
  EPX73023.1 354 DVRSGQLLGEYtGHQEPILCMS--VTADGKRVISGSDDTELLVFD 396
                 5555555555533355566666..555666666666666555554 PP

>> DUF1361  Protein of unknown function (DUF1361)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00013      0.33      38      50 ..     333     345 ..     309     364 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00013
     DUF1361  38 lflPNapYllTDl 50 
                 +flPN+pYllT  
  EPX73023.1 333 AFLPNSPYLLTAC 345
                 8**********66 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (399 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       901  (0.0502538); expected 358.6 (0.02)
Passed bias filter:                      649  (0.0361983); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.65u 0.30s 00:00:00.95 Elapsed: 00:00:00.49
# Mc/sec: 2442.51
//
Query:       EPX73024.1  [L=887]
Description: ER membrane protein complex subunit 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.1e-66  222.4   0.8    9.2e-66  221.6   0.8    1.4  1  EMC1_C    ER membrane protein complex subunit 1, C-terminal
  ------ inclusion threshold ------
       0.02   14.5   0.0      0.074   12.6   0.0    2.0  2  PQQ_2     PQQ-like domain


Domain annotation for each model (and alignments):
>> EMC1_C  ER membrane protein complex subunit 1, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  221.6   0.8     1e-69   9.2e-66       1     213 []     675     885 ..     675     885 .. 0.97

  Alignments for each domain:
  == domain 1  score: 221.6 bits;  conditional E-value: 1e-69
      EMC1_C   1 sEnwivysyfne.kkkrqeivvveLyeskesnereklssaansssleavelpevlsqsfifpegikalavttTkkgItskslllalesgqivslprrll 98 
                 sEnw+vysy+n+ ++ +++iv+veL+e++++n + +++ ++n    ++  +p ++++sf + + i+a+avttT++gIts+++l+ l+s+q+  +p+ +l
  EPX73024.1 675 SENWLVYSYWNAvPSISTKIVSVELFEGDKPNVKHNIDVVENG---NNNYIPAAFTKSFNIDRLINAMAVTTTNQGITSRDILVSLSSNQLGMIPQSIL 770
                 6***********9*********************998766555...55689************************************************ PP

      EMC1_C  99 dpRrpvrkptaaekeeglipYepllpidpksvishkrevagvkkiltaptllEStslvlafGlDlfltrvaPsksFDlLskdFnkilLiltvvallvlv 197
                 +p rpv+k+ ++ +    +pYep+++i + +++s+++++ g+kk++++p+++ESt+lvlafGlD+f+tr+aPs  FD+Ls+ F+k +L+lt++++l++v
  EPX73024.1 771 SPLRPVQKQNEKPQPSSFVPYEPVMTIFDDRILSYDQRLYGIKKMISEPSTFESTTLVLAFGLDVFFTRTAPSMPFDMLSSYFDKKQLVLTTLGILFTV 869
                 ******999999999************************************************************************************ PP

      EMC1_C 198 lvlrplvkrkklnkrW 213
                 l++rp+vkrk+ln++W
  EPX73024.1 870 LITRPMVKRKQLNAKW 885
                 **************** PP

>> PQQ_2  PQQ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   8.3e-06     0.074      37     102 ..      52     130 ..      48     154 .. 0.70
   2 ?   -3.8   0.0      0.88   7.9e+03       5      40 ..     645     680 ..     643     684 .. 0.66

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 8.3e-06
       PQQ_2  37 gtlfvatgggrlvaldaatGkvlWettlegpvvga.........plvaegrvvvvasdgqlia....ldaedGkrlWst 102
                 + ++v +++g l+ +da++G ++W++++++++  +          ++  +++ v + ++ +++    ++a+ G  l++t
  EPX73024.1  52 DSFLVLSERGLLSRIDATNGDIVWRQAVDEQTELIfreskprytLTLGSDHLNVWNTNNGVLEtkldISAAKGGSLYET 130
                 5678889999999999999999999999888766666666666655555555555555533333544666666666664 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 0.88
       PQQ_2   5 vsaldaatGaelWrvdlar..plgggvsravlsggtlf 40 
                 v+ +d  tGa+l r ++ +  ++ +++  avls+++l+
  EPX73024.1 645 VYIIDTVTGAILHRNSHSEvyDFENIS--AVLSENWLV 680
                 566777777777777664434477777..777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (887 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       421  (0.0234815); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.29s 00:00:00.90 Elapsed: 00:00:00.44
# Mc/sec: 6013.63
//
Query:       EPX73025.1  [L=102]
Description: hypothetical protein SOCG_05747 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1004  (0.0559987); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.29s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 729.88
//
Query:       EPX73026.1  [L=408]
Description: CAF assembly factor complex subunit C [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.8e-18   65.9   0.1    1.6e-17   63.5   0.1    2.3  2  CAF1C_H4-bd  Histone-binding protein RBBP4 or subunit C of CA
    7.2e-05   23.5   6.9       0.37   11.7   0.1    4.7  5  WD40         WD domain, G-beta repeat
  ------ inclusion threshold ------
      0.016   15.2   0.1        2.7    8.2   0.1    2.8  2  NHL          NHL repeat


Domain annotation for each model (and alignments):
>> CAF1C_H4-bd  Histone-binding protein RBBP4 or subunit C of CAF1 complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.5   0.1   2.7e-21   1.6e-17       2      67 .]      23      92 ..      22      92 .. 0.90
   2 ?   -1.5   0.0      0.52   3.1e+03      50      62 ..     391     403 ..     388     406 .. 0.75

  Alignments for each domain:
  == domain 1  score: 63.5 bits;  conditional E-value: 2.7e-21
                 HHHHHHHHHHHHEEEEEEEE-SS--S-EEE-S-..B--..-.EEEEEEEE----TTSS-EEEEEEEEEEEX CS
  CAF1C_H4-bd  2 eylewkknapfLYdmlhshslewPsLsfdwlPd..tvs..s.lskqrllvGtqtsgkeqnylyvakvslpk 67
                 ++ +wkkn +fLY++l + +l wPsLs++wl    + s  + + k rll+Gt+++++ +nyl++a+++lp+
   EPX73026.1 23 KHFHWKKNSRFLYNLLVTRTLLWPSLSIEWLSVveK-SneKpIDKYRLLLGTHAAEGFPNYLQLADIDLPN 92
                 5668**************************887532.258899*************************996 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.52
                  -TTSS-EEEEEEE CS
  CAF1C_H4-bd  50 tsgkeqnylyvak 62 
                  +s  ++n+l+++k
   EPX73026.1 391 ASVADDNELHIWK 403
                  6677899999987 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0         3   1.8e+04      13      38 .]     134     160 ..     129     160 .. 0.48
   2 ?    1.7   0.0     0.089   5.3e+02      20      38 .]     194     211 ..     174     211 .. 0.70
   3 !    8.7   0.0   0.00057       3.4      10      36 ..     229     259 ..     222     261 .. 0.77
   4 ?    1.1   0.5      0.14   8.5e+02      14      38 .]     335     359 ..     323     359 .. 0.77
   5 !   11.7   0.1   6.3e-05      0.37       4      38 .]     366     403 ..     363     403 .. 0.71

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 3
                 EEEEEEETTSSEEEEE.ETTSEEEEEE CS
        WD40  13 vtslafspdgawlasG.sdDgtvriWd 38 
                 ++  +  p ++ +++  s  g v+++d
  EPX73026.1 134 INRARHMPQNPNIIATfSSSGEVYVFD 160
                 655554444444443333366666665 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.089
                 TTSSEEEEEETTSEEEEEE CS
        WD40  20 pdgawlasGsdDgtvriWd 38 
                 ++g++l++G  D ++  Wd
  EPX73026.1 194 RNGKLLSAGN-DSKILEWD 211
                 5777787666.*9999887 PP

  == domain 3  score: 8.7 bits;  conditional E-value: 0.00057
                 S.SS..EEEEEEETTSSEE.EEEETTSEEEE CS
        WD40  10 H.ss..vtslafspdgawl.asGsdDgtvri 36 
                 H +s  v+++ ++p++  l +++sdDg+v +
  EPX73026.1 229 HnNSiaVNDVEYNPSHENLyIAASDDGNVLV 259
                 7566788****88888888436799***976 PP

  == domain 4  score: 1.1 bits;  conditional E-value: 0.14
                 EEEEEETTSSEE.EEEETTSEEEEEE CS
        WD40  14 tslafspdgawl.asGsdDgtvriWd 38 
                 ts+++s +++ + +s++  + + +W+
  EPX73026.1 335 TSMSWSWSSPSIlVSAC-EKLCFVWN 359
                 77887777777515778.99999998 PP

  == domain 5  score: 11.7 bits;  conditional E-value: 6.3e-05
                 EEEEE.SS.SSEEEEEEETTSSEEEEE.ETTSEEEEEE CS
        WD40   4 lrtlt.GH.ssvtslafspdgawlasG.sdDgtvriWd 38 
                 l+ l  GH + v+ ++f+p  +  +++  dD+ ++iW+
  EPX73026.1 366 LKFLHgGHrGLVNEVDFCPFDSNCVASvADDNELHIWK 403
                 55554499544*****77777775544489*******6 PP

>> NHL  NHL repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0     0.012        70       4      20 ..     144     161 ..     142     164 .. 0.80
   2 ?    8.2   0.1   0.00045       2.7       7      21 ..     249     263 ..     249     267 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.012
                 EEEEEEE.TTTEEEEEEC CS
         NHL   4 PhGvavd.snGdiyVaDs 20 
                 P+ +a + s+G++yV D+
  EPX73026.1 144 PNIIATFsSSGEVYVFDR 161
                 66688888*******885 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.00045
                 EEEETTTEEEEEECC CS
         NHL   7 vavdsnGdiyVaDse 21 
                 +a++++G+++V+D++
  EPX73026.1 249 IAASDDGNVLVCDNR 263
                 7899*********86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (408 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       411  (0.0229238); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2943.16
//
Query:       EPX73027.1  [L=68]
Description: F0-ATPase subunit K [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.2e-15   55.6   0.0    5.8e-15   55.4   0.0    1.0  1  ATP19     ATP synthase subunit K


Domain annotation for each model (and alignments):
>> ATP19  ATP synthase subunit K
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.4   0.0   3.2e-19   5.8e-15       4      65 ..       3      67 ..       1      68 [] 0.81

  Alignments for each domain:
  == domain 1  score: 55.4 bits;  conditional E-value: 3.2e-19
                X---STTSS--S-SHHHHHHHHH--XXXXXXXXXXXX......XXXXXXXXXXXXXXXXXXXXXX CS
       ATP19  4 aYtIaGravkshyLAlgtLgttglivylamggskkkkaaa...appinasssdEedfIknFlaea 65
                 YtIaGr+++s +L+l +Lg+++++ ++ +   k +k  +    pp+nas+++Ee+fI ++++++
  EPX73027.1  3 VYTIAGRQFQSYQLSLTVLGSVFVGPWVYSKLFKRQKSLKegeMPPLNASNKEEEAFILKYIKDH 67
                7*********************998665554444433333345********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       281  (0.0156729); expected 358.6 (0.02)
Passed bias filter:                      231  (0.0128842); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.22s 00:00:00.55 Elapsed: 00:00:00.36
# Mc/sec: 560.86
//
Query:       EPX73028.1  [L=223]
Description: hypothetical protein SOCG_00785 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-05   25.3   0.2    1.6e-05   24.7   0.2    1.2  1  SARAF     SOCE-associated regulatory factor of calcium homoeo
  ------ inclusion threshold ------
      0.014   16.0   0.0       0.76   10.4   0.0    2.1  2  Ctr       Ctr copper transporter family


Domain annotation for each model (and alignments):
>> SARAF  SOCE-associated regulatory factor of calcium homoeostasis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.2   1.8e-09   1.6e-05       5     131 ..      14     131 ..       8     139 .. 0.79

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 1.8e-09
       SARAF   5 llvlataaaaakkkkdkvlLsdvqaLTLrkg.rlTtaRRvspipQLkCvggsagsaaslyevdvvrCtNkGsdydgedvqWeCkad.LpeelklGstdV 101
                 +++  +a+a+++       L ++q+LT+       ++ ++   p L C  g   +a++ ye +   C+ +  +    d++W+C+   +   ++     V
  EPX73028.1  14 VFYSGNALAYSQ------SLDRIQVLTFSTPdPEDSKSKSTKNPKLICS-G---AACEDYETKYAICQHNQLNVSPLDIKWSCSWPyMSDRVHVVDYGV 102
                 444444444443......599*******987456677788889*****8.5...566677889999*999999***********877************ PP

       SARAF 102 iCEGY.dspdDpyvLkGSCGveYrLelteeg 131
                  C  Y ++++ p + + SC++ YrLe++ +g
  EPX73028.1 103 HCKVYyAHANEPII-Q-SCSLDYRLEYSTSG 131
                 ***86256666655.4.*********99877 PP

>> Ctr  Ctr copper transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0    0.0075        68      23      68 ..       2      48 ..       1     109 [. 0.65
   2 ?   10.4   0.0   8.5e-05      0.76      15      50 ..     142     176 ..     126     213 .. 0.73

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.0075
         Ctr 23 qlagsciglfllaifyeflralrerler.ewdrhl..arsrekrkaass 68
                +l+ s+++l++l++      a+++ l+r ++        + e +k++s+
  EPX73028.1  2 SLFSSFVFLLFLVFYSGNALAYSQSLDRiQVL--TfsTPDPEDSKSKST 48
                68999*********999999999999772222..122222222222222 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 8.5e-05
         Ctr  15 sWritskgqlagsciglfllaifyeflralrerler 50 
                 sWr+ s+ +l+++c+g+ l++++++ l++l +   r
  EPX73028.1 142 SWRPFSA-GLILFCAGVYLMSACMRILGYLGSPRTR 176
                 5666665.89******************88665544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (223 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       386  (0.0215294); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1675.28
//
Query:       EPX73029.1  [L=244]
Description: ubiquitin-fold modifier-specific protease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.5e-40  137.8   0.4    4.5e-40  137.4   0.4    1.1  1  Peptidase_C78    Peptidase family C78
  ------ inclusion threshold ------
      0.075   12.4   0.4       0.54    9.6   0.0    2.2  2  Guanylate_cyc_2  Guanylylate cyclase


Domain annotation for each model (and alignments):
>> Peptidase_C78  Peptidase family C78
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.4   0.4     5e-44   4.5e-40       5     211 ..      20     218 ..      17     219 .. 0.88

  Alignments for each domain:
  == domain 1  score: 137.4 bits;  conditional E-value: 5e-44
                    E-SS--BE--T.CSSS--TTTTHHHHHHHHHHHHHHHTTS-SS-....---HHHHHHHHHHTTSSTGG..........GTTSS--B-HHHHHHHHH CS
  Peptidase_C78   5 avlgsyevdhy.qskledkGwgCgYRnlQmllSwlleskeeakevlfevptipeiQelleeawdkgfdsqgalelgg.ivgsrkwIGttEaaallr 98 
                    ++l s++v+++ + k  d GwgCg+Rn+Qml+Swl+ s +++ e     +++p++ + l +aw++g+d+ g +++g+ + g  +wIG+tEa++l++
     EPX73029.1  20 VSLASGDVYYFsTIKNIDYGWGCGWRNIQMLFSWLQTSYSKWFESHHYKYDLPDLRKHLLNAWKQGIDVDGCEQIGTrLEG--TWIGATEAYTLMT 113
                    56789999**9999999**************************98888*****************************9999..6************ PP

                    HH--EEEEEEESSHHHH...HHTHHHHHHHHH..........HT---EEEE..ETEEEEEEEEE-TTS-EEEEEE--S--SSS-.HHHHHCSTTEE CS
  Peptidase_C78  99 slgikckivdfkstgeleahaelleevanyFesleesskvlqtnlppiylqhqghsrtivGveirkngelnlLvlDPhftgaeeikklvekkgaes 194
                     l +++ +vdf+ ++  +a ++l+   +++F+    +s+ ++ + +p+ylq qghs+t++G++ + +   +l+v+DP+ +++++++    ++++ +
     EPX73029.1 114 GLMLNVGLVDFDFHNRSSAVEALFLFFKDHFS----DSSKSKCHISPCYLQFQGHSITVIGYCSSLK---SLVVFDPDAHQSNKKNTSGFQQDTMK 202
                    ***********99999999*************....666677899*********************9...6******8877776333333333444 PP

                    E..EEGGGS-SSS-EEE CS
  Peptidase_C78 195 wlrrgaktlkkkkeyql 211
                    ++  ++++++ + +yq+
     EPX73029.1 203 RMLVNKRFFR-DLQYQV 218
                    4566777776.777887 PP

>> Guanylate_cyc_2  Guanylylate cyclase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.1     0.029   2.6e+02       8      27 ..      38      57 ..      33      92 .. 0.81
   2 ?    9.6   0.0     6e-05      0.54     157     189 ..     158     190 ..     122     205 .. 0.82

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.029
  Guanylate_cyc_2  8 esWDCGlaCvlmvlkelkqk 27
                     + W CG   ++m+ + l+++
       EPX73029.1 38 YGWGCGWRNIQMLFSWLQTS 57
                     78**********97765543 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 6e-05
  Guanylate_cyc_2 157 kseytGhyvvlcGydakekkllyrnPassdkvc 189
                        +++Gh + ++Gy ++ k+l++ +P ++++ +
       EPX73029.1 158 YLQFQGHSITVIGYCSSLKSLVVFDPDAHQSNK 190
                      4579**********************9887544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       529  (0.0295053); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1763.82
//
Query:       EPX73030.1  [L=184]
Description: meiotically upregulated Mug66 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      7e-26   91.1   0.0    8.1e-26   90.9   0.0    1.1  1  ATG101           Autophagy-related protein 101
  ------ inclusion threshold ------
       0.18   10.9   0.0       0.22   10.6   0.0    1.2  1  PHA_synth_III_E  Poly(R)-hydroxyalkanoic acid synthase subuni


Domain annotation for each model (and alignments):
>> ATG101  Autophagy-related protein 101
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.9   0.0   9.1e-30   8.1e-26       1     151 [.       8     148 ..       8     152 .. 0.85

  Alignments for each domain:
  == domain 1  score: 90.9 bits;  conditional E-value: 9.1e-30
      ATG101   1 eltversqvrevvkailhtIlFhRllgkvkpkdvevesldltyvavsdeelerlvdekvealvralekasssksgqivvqFfekkrkkawfgkkeeevv 99 
                 eltv ++ + evvk++l tIlFhR + +v  k+v++  l++t+++ +++el++++ +k++++v+ l +++ + s+q++v F+e+  kk+wfg +    +
  EPX73030.1   8 ELTVGHKYAAEVVKGVLGTILFHRQFHTVISKTVDI--LEVTVPTLGNAELDETLTSKAAEFVDGLPNQHGA-SSQMMVLFYERLPKKSWFG-TGTVNP 102
                 68889999****************************..***************************9987554.6*****************5.56666* PP

      ATG101 100 WEqWivkvevvetprseserekvrealessLeeallkilelvnekk.dhiPpi 151
                 WEqW v+v ++e+       +   +a + sLe a  +i+++vn +  +++Pp+
  EPX73030.1 103 WEQWLVNVVITES-------KDSYHASSTSLECATEQIVQAVNLRSlSYLPPV 148
                 **********884.......445566677777777777777774432566766 PP

>> PHA_synth_III_E  Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   2.4e-05      0.22      39     105 ..      54     122 ..      31     141 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 2.4e-05
  PHA_synth_III_E  39 avspkeasdaakelmermveqqkayfrlleqfakafadkdasasavedaweq..lekaieqlqkafqgl 105
                      a+++++  ++a e+++ + +q +a  +++ +f++++ +k +  ++  + weq  ++ +i + + +++++
       EPX73030.1  54 AELDETLTSKAAEFVDGLPNQHGASSQMMVLFYERLPKKSWFGTGTVNPWEQwlVNVVITESKDSYHAS 122
                      5667778889999***************************************64455555555555443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       358  (0.0199677); expected 358.6 (0.02)
Passed bias filter:                      333  (0.0185733); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.28s 00:00:00.66 Elapsed: 00:00:00.42
# Mc/sec: 1329.58
//
Query:       EPX73031.1  [L=459]
Description: Jmj1 protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-19   71.0   1.4    2.9e-19   69.6   1.4    1.8  1  JmjC      JmjC domain, hydroxylase
    2.5e-12   47.1   1.2      6e-12   45.8   1.2    1.6  1  Cupin_8   Cupin-like domain


Domain annotation for each model (and alignments):
>> JmjC  JmjC domain, hydroxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.6   1.4   3.2e-23   2.9e-19       3     114 .]     223     329 ..     221     329 .. 0.85

  Alignments for each domain:
  == domain 1  score: 69.6 bits;  conditional E-value: 3.2e-23
                 EEE-TT-EEEEE--GGG-EEEEEEEEES-EEEEEE-GGGHHHHHHHHHHHHHCCSTTGCCTTTCEE-HHHHHHTT---EEEEE-TT-EEEE-TT-EEEE CS
        JmjC   3 ylgmpksttpwhiedqglySinylhfgapkvWyiipeekkeklekvlskknskeqpdllrhkstlispkqlekegipvyrfvqkpgefVfvfpgayHsv 101
                 y+g+++sttp h + ++++S ++ ++++ k+W +ip++++e + k+ +++     p+ ++h   l + +  +k    v  + q+pg++Vfv++g+yH+v
  EPX73031.1 223 YIGSHLSTTPLHKDVYESHS-VSVNLCGVKCWIFIPPSDAEFIHKQFEDEG---LPSWITHSLFLENDNF-KKIHGNVRILFQFPGQTVFVPSGWYHQV 316
                 9******************9.8888999999*************9999993...4555555555554444.3333578889****************** PP

                 EESSSEEEEEEEE CS
        JmjC 102 fnlgfniaeavnf 114
                 +n+g+++++++n+
  EPX73031.1 317 LNIGTTLSINHNW 329
                 ************9 PP

>> Cupin_8  Cupin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.8   1.2   6.7e-16     6e-12       4     250 ..      18     331 ..      15     334 .. 0.61

  Alignments for each domain:
  == domain 1  score: 45.8 bits;  conditional E-value: 6.7e-16
     Cupin_8   4 ffreyvakskPviikg.alkdwpalqkwtddeylleylkekaedvkvs.........vektpdgeadsf............keneelkfvkpeeeemtf 80 
                 f ++y++   Pv+i   ++++w+  ++w      +e+ ++  +dv+           +  ++ +++d +            k  +  ++++++++   +
  EPX73031.1  18 FLEKYLKPCHPVLIGKkLTENWESRKTWVR---QFEKNGDDSKDVRKDsqcptglefLRSKAASHNDLLpdnlwdalveasK--QYYDSEEEAYKDLLL 111
                 5699999999*9997736667***999985...3455555555544444555666662233333444446666666666430..233344444444444 PP

     Cupin_8  81 kdfldelearrdtrsepyayl...........qnanlasefpelkedsdlpfateafgkkpeavn.................................. 134
                 + + ++l++   + + p ay            +n +l++++++l+e+ ++ +++  + ++  ++n                                  
  EPX73031.1 112 SPNYEHLKQVYGNIEVPLAYCsqkdkygsqkrENVQLRTALQKLEEE-EIMLRSIRLPESVGSYNlirmypkdmhlfrdspvsipyetpdlfvddwlna 209
                 44455555544444444444444444444444566666666666654.222222222222222334445556666666777777777777777777778 PP

     Cupin_8 135 ............lWlGnsasvsslHkDhye..NlycvvrGrKkftLfpPsdapflyeaslsptedgtvvssvd.veepdlekfprlkdakkalevtlna 218
                              ++G   s++ lHkD+ye   + + + G+K ++++pPsda+f+ ++ +    d+   s++   + ++++ f+++     + +    +
  EPX73031.1 210 ytmnqenddfrfSYIGSHLSTTPLHKDVYEshSVSVNLCGVKCWIFIPPSDAEFIHKQFE----DEGLPSWIThSLFLENDNFKKIHGN--VRILFQFP 302
                 8888888888889****99*********88225666678****************99962....2233445441234555677777666..3333345* PP

     Cupin_8 219 GevLylPalWfHeVkslaeeplhlavnywydm 250
                 G+++++P++W+H+V +   + ++l++n ++ +
  EPX73031.1 303 GQTVFVPSGWYHQVLNI--G-TTLSINHNWCN 331
                 ***************99..5.59999999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (459 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       590  (0.0329076); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.28s 00:00:00.85 Elapsed: 00:00:00.45
# Mc/sec: 3067.52
//
Query:       EPX73032.1  [L=410]
Description: hypothetical protein SOCG_00789 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (410 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       562  (0.0313459); expected 358.6 (0.02)
Passed bias filter:                      270  (0.0150594); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2931.11
//
Query:       EPX73033.1  [L=478]
Description: LAlv9 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     1e-118  396.4   0.4   1.4e-118  395.9   0.4    1.1  1  Avl9      Transport protein Avl9
    1.2e-08   34.9   0.3      0.002   17.8   0.0    2.8  2  DUF2347   Uncharacterized conserved protein (DUF2347)
    9.8e-06   26.1   0.0    1.9e-05   25.1   0.0    1.4  1  Afi1      Docking domain of Afi1 for Arf3 in vesicle traffick


Domain annotation for each model (and alignments):
>> Avl9  Transport protein Avl9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  395.9   0.4  2.3e-122  1.4e-118       2     379 .]      11     368 ..      10     368 .. 0.96

  Alignments for each domain:
  == domain 1  score: 395.9 bits;  conditional E-value: 2.3e-122
        Avl9   2 lailvvgFhHkkGpevefsyppeeeekeekesewklLpflalpDGsHnfeedfvyFtleedeseteeektlfgiscvrQikaeelkartadvtRstvQK 100
                  +++ v+FhH +Gpe+e+++p    ++ e ++ew+ Lpfl lpDG+H  e+dfvyFtl++    + +++t fg++c+rQ++ +++k+ ++dvtR ++QK
  EPX73033.1  11 YCMVTVDFHHIRGPEIEHVFP----QSIELPKEWSILPFLCLPDGAHMQEKDFVYFTLPY---PNPQHSTAFGLACSRQLSINHVKNLPSDVTRPSIQK 102
                 67889****************....9999******************************4...44567899**************************** PP

        Avl9 101 svvvlsklpifgkikekLslitkayfeqkdfsnteilkelyeqlnaelkskekeeleesklfvglslrelvlkfrhkvLvlfKlllLekkvlvygspve 199
                 +vv ++++p fg+ik++L+++t+ayf+q+dfsn +il+++ye+l ++          + ++ +g++ +++ l +++++Lvl+Kl+lL kkvlvy +  e
  EPX73033.1 103 AVVLICSTPQFGHIKDNLEIVTDAYFSQNDFSNLSILHDFYESLVNK-----GP---QLQVSLGVNSKDVFLCWKQNTLVLLKLVLLGKKVLVYDRVAE 193
                 ********************************************533.....23...44799************************************* PP

        Avl9 200 klcelilsliSLipelieklqdsasplleslesdlelkkpeslkesdrksvleqlglPlqiFekgalflPYlpLqqldlLsdksvksflvGtsNsLllq 298
                 +l +l++sl+SLip+++ +l+dsa+p+++ l+s+  l+kp+slk+sdr+s+++++g+Pl +F + ++f+PY+pLqq++ L++ s++s+l+G++N+L++ 
  EPX73033.1 194 RLGNLQYSLLSLIPNMLLSLHDSADPSSNYLQST--LSKPSSLKTSDRDSLMAYIGFPLLLFGEKSMFSPYIPLQQVHILESCSTRSWLAGSTNTLIML 290
                 ********************************99..*************************************************************** PP

        Avl9 299 qkelladvlvdvdeaeieikdkelkkalqlsteDkrfidelvkkveetkedaeeetegfeGsddwiRaqfeeYlvallssv 379
                 +++++adv+v  d++ei +kd++l++ ++l+ +Dkr++d++++ ++ ++e++     ++eG+++w+Raqfe Y++++ls++
  EPX73033.1 291 NQNKMADVVVRADTEEIFYKDNSLRSLVNLTRADKRWMDDVLSVISAHEEKSL---PEYEGNNEWLRAQFEAYIFGFLSTI 368
                 **********************************************9999888...79********************995 PP

>> DUF2347  Uncharacterized conserved protein (DUF2347)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   3.4e-07     0.002       5     119 ..      17     144 ..      13     162 .. 0.71
   2 !   14.1   0.2   4.5e-06     0.027     177     277 ..     173     306 ..     170     312 .. 0.76

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 3.4e-07
     DUF2347   5 kFDvkkGytivwsksvpdveleg....vEfksLPSGihevsedlvyfv.......heeyyglsaFrqneveeeeer......nvkmysvGvlvdssner 86 
                 +F   +G +i+   + +++el      + f  LP G h +++d+vyf+       h   +gl++ rq ++++ ++            +v ++++     
  EPX73033.1  17 DFHHIRGPEIEHVFP-QSIELPKewsiLPFLCLPDGAHMQEKDFVYFTlpypnpqHSTAFGLACSRQLSINHVKNLpsdvtrPSIQKAVVLICST---- 110
                 566666666665555.444443222237899***********************99999***********9998888866653344556666665.... PP

     DUF2347  87 lskawryaekLkellkkllese..dntsvLeeyfe 119
                   +  + +++L+     + +++  +n+s+L++++e
  EPX73033.1 111 -PQFGHIKDNLEIVTDAYFSQNdfSNLSILHDFYE 144
                 .2333567777777766665555788888888884 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 4.5e-06
     DUF2347 177 fpLykaaLlrkrILllssapveelcslvYllslLssipksleellkse...ssrlrplfnvgvaDipsLekekke........................ 248
                 ++L k +Ll k++L++     e+l +l Y  slLs+ip+ l +l++s+   s++l    +  ++  +sL++ +++                        
  EPX73033.1 173 LVLLKLVLLGKKVLVYDRV-AERLGNLQY--SLLSLIPNMLLSLHDSAdpsSNYL----QSTLSKPSSLKTSDRDslmayigfplllfgeksmfspyip 264
                 5799************999.699****99..678999999998888774433333....33344444444444334444445699999999******** PP

     DUF2347 249 ............sgyiActtde.iLalkkeLyDvlvklppks 277
                              +++A +t++ i+  ++++ Dv+v  ++++
  EPX73033.1 265 lqqvhilescstRSWLAGSTNTlIMLNQNKMADVVVRADTEE 306
                 *******99999999998887735566889999999988765 PP

>> Afi1  Docking domain of Afi1 for Arf3 in vesicle trafficking
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.0   3.2e-09   1.9e-05       4      59 ..      15      70 ..      12     100 .. 0.87

  Alignments for each domain:
  == domain 1  score: 25.1 bits;  conditional E-value: 3.2e-09
        Afi1  4 vAeFdidkGpvikhqYPkaipgdetlseLAelmlPdqvhkrkqDitvFfLykdtst 59
                + +F+  +Gp i+h +P++i   ++ s L  l lPd++h++++D+  F+L + + +
  EPX73033.1 15 TVDFHHIRGPEIEHVFPQSIELPKEWSILPFLCLPDGAHMQEKDFVYFTLPYPNPQ 70
                6689*99************999888889**********************887654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (478 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       429  (0.0239277); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.45
# Mc/sec: 3167.50
//
Query:       EPX73034.1  [L=132]
Description: hypothetical protein SOCG_00791 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.021   13.6   0.8      0.021   13.6   0.8    1.1  1  DUF2207   Predicted membrane protein (DUF2207)
        1.4    9.5   7.4        2.4    8.7   7.4    1.5  1  DUF202    Domain of unknown function (DUF202)
        3.2    7.7   4.7        2.9    7.9   0.1    2.7  2  COX8      Cytochrome oxidase c subunit VIII
          4    6.7   4.7       0.44    9.8   0.1    1.7  2  CcmH      Cytochrome C biogenesis protein


Domain annotation for each model (and alignments):
>> DUF2207  Predicted membrane protein (DUF2207)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.8   4.7e-06     0.021     378     427 ..      68     125 ..      27     132 .] 0.60

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 4.7e-06
     DUF2207 378 kklkklsalglgliilglilillallllvll.............lvfllilllillliaiivl 427
                 ++l +  +++l++i+lg+ +i+++ l+l++              +   ++++++l+l++++++
  EPX73034.1  68 TILLW--MYALLFIFLGFTIIFMGSLTLNYYnmfqlcasdimafI---VFFAIFLMLFLFAAA 125
                 44433..45555666777777777777777777888886653321...222222222222222 PP

>> DUF202  Domain of unknown function (DUF202)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   7.4   0.00054       2.4       2      62 ..      61     128 ..      60     132 .] 0.57

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00054
      DUF202   2 dglAnERTfLaWlRtslalialglallrffl.tgepsal.....gkilgli..livlgiltllvglvry 62 
                 ++   ERT L W+  +l++i+lg++++   + t +  ++     + i+++i  ++++ +l+l+ ++v y
  EPX73034.1  61 PVSSDERTILLWM-YALLFIFLGFTIIFMGSlTLNYYNMfqlcaSDIMAFIvfFAIFLMLFLFAAAVLY 128
                 66678*******9.799**********542243333332222223444444334444445555555555 PP

>> COX8  Cytochrome oxidase c subunit VIII
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.1   0.00064       2.9       4      26 ..      56      78 ..      54      93 .. 0.88
   2 ?   -0.0   1.4      0.18   8.2e+02      19      28 ..     109     118 ..     103     128 .. 0.60

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.00064
                ---SS---HHHHHHHHHHHHHHH CS
        COX8  4 kPPreplsaaeqaiglsvffvtf 26
                kP++ p+s  e +i l + ++ f
  EPX73034.1 56 KPAKRPVSSDERTILLWMYALLF 78
                9*************998777666 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.18
                 HHHHHHHHHH CS
        COX8  19 lsvffvtfLl 28 
                   vff+ fL+
  EPX73034.1 109 FIVFFAIFLM 118
                 4566666654 PP

>> CcmH  Cytochrome C biogenesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.1   9.9e-05      0.44      93     116 ..      65      88 ..      59      94 .. 0.88
   2 ?   -3.1   1.0      0.98   4.4e+03     104     112 ..     116     124 ..     106     131 .. 0.40

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 9.9e-05
                 XXXXXXXXXXXXXXXXXXXXXXXX CS
        CcmH  93 kastllLWlgPllllllgllvlll 116
                 + +t+lLW+  ll++ lg++++++
  EPX73034.1  65 DERTILLWMYALLFIFLGFTIIFM 88 
                 568****************99987 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 0.98
                 XXXXXXXXX CS
        CcmH 104 llllllgll 112
                 +l+l l ++
  EPX73034.1 116 FLMLFLFAA 124
                 222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1387  (0.0773607); expected 358.6 (0.02)
Passed bias filter:                      607  (0.0338558); expected 358.6 (0.02)
Passed Vit filter:                        91  (0.00507558); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 947.43
//
Query:       EPX73035.1  [L=354]
Description: heterotrimeric G protein alpha-2 subunit Gpa2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-96  324.0  11.6    2.4e-96  323.0  11.6    1.4  1  G-alpha    G-protein alpha subunit
    2.5e-14   53.1   1.0    2.4e-09   36.9   0.2    2.9  2  Arf        ADP-ribosylation factor family
    0.00011   21.6   2.4      0.042   13.2   0.4    2.3  2  Gtr1_RagA  Gtr1/RagA G protein conserved region
  ------ inclusion threshold ------
      0.019   15.1   0.1        2.4    8.4   0.0    2.6  2  Roc        Ras of Complex, Roc, domain of DAPkinase
      0.034   13.5   0.1      0.059   12.8   0.1    1.3  1  TniB       Bacterial TniB protein
      0.055   13.2   0.1       0.11   12.3   0.1    1.5  1  AAA_29     P-loop containing region of AAA domain
      0.061   13.2   0.0        0.1   12.4   0.0    1.3  1  CPT        Chloramphenicol phosphotransferase-like protein
      0.065   12.8   0.1        9.3    5.7   0.0    2.4  2  GTP_EFTU   Elongation factor Tu GTP binding domain


Domain annotation for each model (and alignments):
>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  323.0  11.6   1.1e-99   2.4e-96       2     354 .]      15     343 ..      14     343 .. 0.92

  Alignments for each domain:
  == domain 1  score: 323.0 bits;  conditional E-value: 1.1e-99
                 XXXXXXXXXXXXXXXXXXE..EEEEEEEESTTSSHHHHHHHHHHHCS----HHHHHCCHHHHHHHHHHHHHHHHHHHHHTT.......HHHC-SS-SCC CS
     G-alpha   2 rtssaidkslkaerkarkkkrevkllllGqseSGKsTilkqlkllykkgfseeelatwraviqlnivrsiktilealesleselsesfelqelkerldp 100
                 ++s++i+k+++a++k+++k  ++k+lllG+s+SGKsTi kq+k+l ++gfs+ee+ ++ +vi+ n+++s+k++++ + +++ +l     ++ +  +++ 
  EPX73035.1  15 KISQKIEKQIEAQQKKNSK--TYKILLLGASDSGKSTISKQIKILNTNGFSQEEIMSFIPVIRRNLLDSAKMLIKFVGNEDVPL-----DPLNIHNCEI 106
                 6899*********999999..**********************************************************98888.....4444444444 PP

                 CS-HCHHHH..........HHCCHHC-HCHHHHHHHHCCSHHHHHHHCCGCCTT--TTHHHHHCTHHHHCSTT----CHHHHCS-----SEEEEEEECT CS
     G-alpha 101 lkkveasliaklssateeeqeiefnpraevgedikaLwndpgiqelyerrnkiklednaeyFlddleritspdYlptddDilkarlktvGisetkfevd 199
                 +  + ++              + ++    +g++i +Lw+  +i+ +++r+ ++ l d+a yF+++ + i+spdY+p+ dDil++r  t+Gise++f++d
  EPX73035.1 107 IERFIPN------------PGELVST--MFGKAIFDLWTVSNIRRCMYRN-DSLLIDSAPYFFQRATAICSPDYVPSIDDILHSRNSTMGISEISFSLD 190
                 4444454............3444555..8999****************99.77788******************************************* PP

                 -TEEEEEEEE-SSHHHHHGTCCCTTTECEEEEEEEGGGTT-B-SS-T..TSBHHHHHHHHHHCCCC-GGGTTSEEEEEEE-HHHHHHHCCCS-GGGCCT CS
     G-alpha 200 sklefrivdvgGqrserkkWvpffddvdaiiFlvslsefdqvlyede..kvnrleeslklFkeicnnkllkntpiiLflnKlDileeKlkkgklskyfp 296
                   l++r++dvgGqr+er+kW+ +f++v+ iiF+vsl +fd+ l+e +  + nrl es++lF++i+n++++ +++iiLflnK+D++++Kl++++++++fp
  EPX73035.1 191 -HLQIRMFDVGGQRTERRKWIYCFENVNSIIFCVSLNDFDKKLFERNvaNRNRLLESVALFDSIINSQWFVESSIILFLNKFDLFRKKLEHVPFTDHFP 288
                 .********************************************86447************************************************* PP

                 T--H.CCHHHHHHHHHHHHHHCCCCCCESGGSCEEEEEE-TT-HHHHHHHHHHHHHHH CS
     G-alpha 297 syegrkndlesvlkylrnkFeeihkeksnnrrkiythftsatdtkevqkviesvrdti 354
                 +++g kn++++ +k++ + F++   +  ++r++iy+h+t+a+dt +++ v+++v++ti
  EPX73035.1 289 QFSG-KNNVKNITKFILWMFVNPSVN--RQRHNIYPHITTAVDTSNIKVVFAAVKETI 343
                 ***9.*****************9553..67779**********************997 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.0   2.1e-05     0.046       5      36 ..      25      56 ..      21      78 .. 0.81
   2 !   36.9   0.2   1.1e-12   2.4e-09      44     129 ..     178     275 ..     169     284 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.1e-05
                HHGGTT.TTEEEEEEEESTTSSHHHHHHHHHH CS
         Arf  5 laklklkkkelrilllGLDnaGKtTilkklkl 36
                 a++k+++k ++illlG   +GK+Ti k++k 
  EPX73035.1 25 EAQQKKNSKTYKILLLGASDSGKSTISKQIKI 56
                56777889******************988764 PP

  == domain 2  score: 36.9 bits;  conditional E-value: 1.1e-12
                 SSSSEEEEEEEETTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEE............ETT-CTTHHHHHHHHHHHCTSGCCTTSEEEEEEE-TTSTT CS
         Arf  44 PTigfnveeleiknlkftvwDvGGqeklRplWknYfektdavifvv............DsadreRleeakeeLkalleeeelkevallvlaNKqDlpe 129
                  T+g    + +  +l+++++DvGGq++ R+ W   fe+++++if+v             +a+r+Rl e+ + ++++++++   e  ++++ NK Dl  
  EPX73035.1 178 STMGISEISFSLDHLQIRMFDVGGQRTERRKWIYCFENVNSIIFCVslndfdkklferNVANRNRLLESVALFDSIINSQWFVESSIILFLNKFDLFR 275
                 57777777888999********************************4443322222222455679999999999999999999************865 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.1   0.00069       1.5       1      19 [.      36      54 ..      36      66 .. 0.93
   2 !   13.2   0.4   1.9e-05     0.042      36     136 ..     181     286 ..     170     343 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00069
   Gtr1_RagA  1 kvLLmGksgsGKtsmrsii 19
                k+LL+G s sGK+++ + i
  EPX73035.1 36 KILLLGASDSGKSTISKQI 54
                89*************9866 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 1.9e-05
   Gtr1_RagA  36 dveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDve............sre.leedletlkeilealrqyspeakvfvlihKm 121
                  +++ ++  l++l++ ++D+gGq++   +       + f+nv+++i+ +  +            +r+ l e+++ + +i++  +q   e ++  +++K+
  EPX73035.1 181 GISEISF-SLDHLQIRMFDVGGQRTERRK-----WIYCFENVNSIIFCVSLNdfdkklfernvaNRNrLLESVALFDSIIN--SQWFVESSIILFLNKF 271
                 5555555.5899***********987665.....589**********9988867666666555533225555555555555..356667889999**** PP

   Gtr1_RagA 122 Dliqedereeifeer 136
                 Dl +++ ++  f+++
  EPX73035.1 272 DLFRKKLEHVPFTDH 286
                 **9999887777665 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.0    0.0011       2.4       1      20 [.      36      55 ..      36      78 .. 0.82
   2 ?    4.1   0.0     0.023        51      51      87 ..     187     224 ..     162     273 .. 0.64

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0011
                EEEEESSTTSSHHHHHHCHC CS
         Roc  1 KvvlvGdsgvGKtsllkrfv 20
                K++l+G s +GK+++ k++ 
  EPX73035.1 36 KILLLGASDSGKSTISKQIK 55
                9**************99875 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.023
                 TTTTCEEEEEEEE-SGGCTTT.T-HHHHCTSCEEEEEE CS
         Roc  51 kkvkkvklniWDtaGqerfrs.lhplylreaalailvy 87 
                  ++++++++++D++Gq   r     ++ + ++++++v 
  EPX73035.1 187 FSLDHLQIRMFDVGGQRTERRkWIYCFENVNSIIFCVS 224
                 345678999******97665416666666666655553 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   2.7e-05     0.059      18      73 ..      15      74 ..      11      84 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2.7e-05
        TniB 18 eilerLeeLley..pkrkrmpnlllvGdsnnGKtmivekFarlhppekdeda..ekvpvl 73
                +i +++e+ +e+   k++++ ++ll+G s+ GK++i ++ + l+++  ++++  + +pv+
  EPX73035.1 15 KISQKIEKQIEAqqKKNSKTYKILLLGASDSGKSTISKQIKILNTNGFSQEEimSFIPVI 74
                6667776666651145778899*****************998888876655411456776 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   4.9e-05      0.11      24      38 ..      36      50 ..      22      67 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 4.9e-05
      AAA_29 24 atlltGpsGsGKSTl 38
                 +ll G+s sGKST+
  EPX73035.1 36 KILLLGASDSGKSTI 50
                68************8 PP

>> CPT  Chloramphenicol phosphotransferase-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   4.5e-05       0.1       4      51 ..      37      84 ..      34     104 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 4.5e-05
                EEEEE-TTSSHHHHHHHHHHHSSS-EEEEEHHHHHHHS-GGGGTSTTS CS
         CPT  4 ilLnGgsssGKsslaralqevldepwlhlgvDafvealppkrqdeadg 51
                ilL G+s sGKs++++ ++ +  + + + ++ +f+  ++ + +d+a+ 
  EPX73035.1 37 ILLLGASDSGKSTISKQIKILNTNGFSQEEIMSFIPVIRRNLLDSAKM 84
                8999***************99999999999999998888777777665 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0    0.0089        20       4      24 ..      35      55 ..      32      77 .. 0.81
   2 ?    5.7   0.0    0.0041       9.3     123     143 ..     262     282 ..     251     343 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.0089
                EEEEEEESTTSSHHHHHHHHH CS
    GTP_EFTU  4 rnigiighvDhGKtTLtdrLl 24
                 +i ++g  D+GK+T++ ++ 
  EPX73035.1 35 YKILLLGASDSGKSTISKQIK 55
                578899**********99885 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0041
                 TEEEEEEESCGSTHHHHHHHH CS
    GTP_EFTU 123 vpiivfiNKmDrlkaelkeiv 143
                   ii+f+NK D  +++l++++
  EPX73035.1 262 SSIILFLNKFDLFRKKLEHVP 282
                 459**********99999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (354 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       809  (0.0451224); expected 358.6 (0.02)
Passed bias filter:                      518  (0.0288917); expected 358.6 (0.02)
Passed Vit filter:                        68  (0.00379274); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.53u 0.32s 00:00:00.85 Elapsed: 00:00:00.46
# Mc/sec: 2308.09
//
Query:       EPX73036.1  [L=225]
Description: hypothetical protein SOCG_00793 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.1e-45  153.2   0.8    1.1e-44  152.8   0.8    1.2  1  Mit_KHE1  Mitochondrial K+-H+ exchange-related


Domain annotation for each model (and alignments):
>> Mit_KHE1  Mitochondrial K+-H+ exchange-related
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.8   0.8   6.2e-49   1.1e-44       1     190 []       2     170 ..       2     170 .. 0.92

  Alignments for each domain:
  == domain 1  score: 152.8 bits;  conditional E-value: 6.2e-49
    Mit_KHE1   1 rlillpittkrsliYcekseeilskssaskaeskekledkltnkaaktwaklekaeegwkkkivelgeklldripyeElaLksipsksakelesekekk 99 
                 r+i+lp+ ++r++++c+ se            +k +++d++ n++ +tw+ ++k+++ +k+k+v++g+++l+r+p+eE++L+s++           +kk
  EPX73036.1   2 RIIALPLPKQRVFLHCYPSE---------LLLKKVTVHDRILNRIYNTWDAWSKSKSFIKQKTVSFGNSVLHRVPHEESFLRSVST----------AKK 81 
                 8****************998.........23345789************************************************4..........344 PP

    Mit_KHE1 100 kkekeelksiellyPssllseekvleelrklaeereelhkkrlilcllgiPltlpfalvPviPNlpffYlvyRayshwkAlkgskhLesll 190
                  ++ke  ++i +  P sl +++++l+el +l e + +lh+k++i +++g+Plt+pf+l+P+iPN+p+fYl+yRay++++Al g+ ++ +ll
  EPX73036.1  82 LNDKEFYSTIVIERPDSL-EPSEILQELIRLQEMK-QLHRKNFIANIIGLPLTIPFILIPIIPNVPGFYLCYRAYCNFRALMGTSQITRLL 170
                 456788999******999.*********9997765.5*************************************************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       553  (0.0308439); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.32s 00:00:00.92 Elapsed: 00:00:00.58
# Mc/sec: 1174.10
//
Query:       EPX73037.1  [L=509]
Description: SWI/SNF and RSC complex subunit Ssr2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.1e-30  103.7   0.0    1.3e-29  102.3   0.0    1.8  1  SWIRM            SWIRM domain
    5.9e-20   71.0   9.1    1.1e-19   70.1   9.1    1.5  1  SWIRM-assoc_1    SWIRM-associated region 1
    4.9e-12   45.8   0.0    1.2e-11   44.6   0.0    1.6  1  Myb_DNA-binding  Myb-like DNA-binding domain
    2.4e-08   34.1   0.2    8.6e-08   32.3   0.2    2.0  1  Myb_DNA-bind_6   Myb-like DNA-binding domain
  ------ inclusion threshold ------
      0.031   14.9   0.5      0.031   14.9   0.5    1.9  2  Zn_ribbon_2      Putative zinc ribbon domain
       0.72    9.7   8.8        1.3    8.9   8.8    1.4  1  ZZ               Zinc finger, ZZ type


Domain annotation for each model (and alignments):
>> SWIRM  SWIRM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.3   0.0   4.4e-33   1.3e-29       1      89 []      21     106 ..      21     106 .. 0.96

  Alignments for each domain:
  == domain 1  score: 102.3 bits;  conditional E-value: 4.4e-33
       SWIRM   1 ps.sewFdpdslhpiEkellselfngk..dktpeeYlkiRnkiialyrenpkeyltvteaqkalkrrrltgidvnllsrihefLerwGlINf 89 
                 ps + wFd++++h+iE+++ +e+fngk   k+p++Y+++R+++i++yr +p+eyltvt++     rr+l g dv+++ r+h+fLe+wGlIN+
  EPX73037.1  21 PSyAGWFDMSKIHDIERKSNPEFFNGKspLKSPTVYKDYRDFMINSYRLEPTEYLTVTAC-----RRNLVG-DVCAIIRVHAFLEQWGLINY 106
                 67789**********************655******************************.....******.*******************8 PP

>> SWIRM-assoc_1  SWIRM-associated region 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.1   9.1   3.8e-23   1.1e-19       2      83 ..     374     455 ..     373     456 .. 0.98

  Alignments for each domain:
  == domain 1  score: 70.1 bits;  conditional E-value: 3.8e-23
  SWIRM-assoc_1   2 iALaaaAakAkvlasqeereiqrlvaqlvetqlkKlelKLkqfeelEklleaerrelekqrqqLlleRlalkkevlkvaekl 83 
                    +A++aaA k+++++++e r+++rlv  l++ ql+K+e+K+k +eelEk+ ++e  el+ + ++L+leRl++kk++l+v++kl
     EPX73037.1 374 AAINAAAEKSRIISTCERRHLRRLVFLLIQSQLEKVEIKMKVLEELEKFCSLELSELDVRAKKLILERLSTKKMLLEVDSKL 455
                    79****************************************************************************9987 PP

>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.6   0.0     4e-15   1.2e-11       3      45 ..     248     290 ..     247     291 .. 0.97

  Alignments for each domain:
  == domain 1  score: 44.6 bits;  conditional E-value: 4e-15
                      SSBHHHHHHHHHHHHHHTTCHHHHHHHHTSS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 kWteeEdelLleavkkhGnrWkkIaerlggRtekqcrsrwrny 45 
                      +Wte+E +lLle+++++ ++W+ I+ ++g+Rt++qc  +++++
       EPX73037.1 248 PWTEQETLLLLEGIEEYDDDWNQISLHVGTRTKEQCLVHFLQL 290
                      7**************************************9986 PP

>> Myb_DNA-bind_6  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.3   0.2   2.9e-11   8.6e-08       1      44 [.     249     291 ..     249     304 .. 0.90

  Alignments for each domain:
  == domain 1  score: 32.3 bits;  conditional E-value: 2.9e-11
  Myb_DNA-bind_6   1 WteeEdeiLlklvekygndWknIaealnrRtpkqcfdrwknkLr 44 
                     Wte+E+ +Ll++ e+y +dW++I+ + + Rt++qc  ++++ L+
      EPX73037.1 249 WTEQETLLLLEGIEEYDDDWNQISLHVGTRTKEQCLVHFLQ-LP 291
                     ***************************99*********999.74 PP

>> Zn_ribbon_2  Putative zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.5     1e-05     0.031       1      66 [.     191     253 ..     191     261 .. 0.76
   2 ?   -2.9   0.2       3.9   1.2e+04      44      63 ..     337     356 ..     330     368 .. 0.50

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1e-05
  Zn_ribbon_2   1 iCqsCGmplkkeedlgteadgsksedYCkyCykdGeftepdltmeemiekcvkklaeenkelteee 66 
                  +C sCG+  +++  +   + ++k+ + C +Cy++G+f ++ ++ + +    v + +++++ +te+e
   EPX73037.1 191 TCYSCGVNCSQAWYH---NLKNKEYTVCPHCYHQGRFANTYTSSDFLFMEGVTFAHDRDAPWTEQE 253
                  599****99766554...555555566************888888888888888777777676665 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 3.9
  Zn_ribbon_2  44 meemiekcvkklaeenkelt 63 
                    ++ie +++k ++e++e +
   EPX73037.1 337 KSNTIENTTEKHESETSEKK 356
                  34444444444444433333 PP

>> ZZ  Zinc finger, ZZ type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   8.8   0.00044       1.3       6      43 ..     191     228 ..     189     230 .. 0.88

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00044
                 E-TTT-S..EESSEEEESSSSS-EE-HHHHHH..H---S CS
          ZZ   6 tCdgCseapligvRyhclrcsdYDLCqsCfst.hkagkh 43 
                 tC  C+     ++ yh+l+ ++Y  C  C+ + ++a ++
  EPX73037.1 191 TCYSCGV-NCSQAWYHNLKNKEYTVCPHCYHQgRFANTY 228
                 7999999.666899******************9998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (509 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1610  (0.0897987); expected 358.6 (0.02)
Passed bias filter:                      750  (0.0418317); expected 358.6 (0.02)
Passed Vit filter:                        81  (0.00451782); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.77u 0.33s 00:00:01.10 Elapsed: 00:00:00.54
# Mc/sec: 2835.04
//
Query:       EPX73038.1  [L=628]
Description: glucosidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.1e-229  763.0   3.5   1.3e-229  762.8   3.5    1.0  1  SKN1      Beta-glucan synthesis-associated protein (SKN1)


Domain annotation for each model (and alignments):
>> SKN1  Beta-glucan synthesis-associated protein (SKN1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  762.8   3.5  7.1e-234  1.3e-229       5     501 .]     129     626 ..     125     626 .. 0.97

  Alignments for each domain:
  == domain 1  score: 762.8 bits;  conditional E-value: 7.1e-234
        SKN1   5 seekekDDylhnpdpeakadkkkkvkdlklldkrgllnvlgllllvlgllllfivlPvltylgkkekestks.eaaeiltkaqvpllsairtslidpdt 102
                  + ke+DD+lhnp    +++  ++ +d k +++  + ++++l+ll+lg+ llfi++P+lty+g+ + +++++ ++ae++t++ + ll+  rt l+dpdt
  EPX73038.1 129 YHCKEEDDDLHNP----NSSVLSVYQDKKSFSWSRWGDIASLILLLLGFFLLFIIFPALTYTGNVSPKKENNpAMAEQITDHVFGLLRFPRTDLVDPDT 223
                 5679*********....446677788999*********************************888877766659999********************** PP

        SKN1 103 PesaltrkskdgkklkLvfsDefnkegrtfydGdDqfwtavdlhYaatkdlewYdpdavttadGtLelrldafknhdLnyrsGmlqsWnklCftggale 201
                 Pesalt+ + +gk++kL fsDefn++gr+fy+GdDqfw+a+dlhYaat+dlewYdpda+tta+GtL +r+d+f nh+Ln+rsGmlqsWnklC++gg++e
  EPX73038.1 224 PESALTKVGVNGKTYKLMFSDEFNTPGRSFYPGDDQFWEAADLHYAATNDLEWYDPDAITTANGTLDIRIDSFANHNLNFRSGMLQSWNKLCWKGGIIE 322
                 *************************************************************************************************** PP

        SKN1 202 vsvsLpgkgevsGlWPglWtmGnLgRpGylasteGvWPYsYdsCDvGitpnqssadGlsylpGqrlsaCtCkgedhpspgvgRgaPeiDileaevetek 300
                 +s+sL g+ge +GlWPglWt+GnL+RpGy+a+t+GvWPYsY++CD+Gitpnqss dG+sylpGq+ls+CtC +edhpspg gRgaPeiD+le+++e+ +
  EPX73038.1 323 ISASLGGSGERAGLWPGLWTIGNLARPGYMATTDGVWPYSYSQCDAGITPNQSSWDGISYLPGQKLSSCTCVDEDHPSPGIGRGAPEIDALEGSTEKLN 421
                 ***********************************************************************************************9988 PP

        SKN1 301 e.....vgvasqslqvaPfdiwylpdydfveiydksvtalnsyaGgpfqqalsglttlnkewyeeegkkfqkygleykpnddekgyitWfvgdektwtl 394
                       +g+asqs q+aPfd++ylp+yd++ i+++svt++nsy Ggpfqqa+sg+t ln++wy  e k+fq+yg++ykp+ + +gy++Wfvg ++twt+
  EPX73038.1 422 PndefdIGSASQSSQFAPFDMFYLPNYDYLVIHNQSVTHMNSYVGGPFQQAISGITILNNSWY--ERKAFQTYGFDYKPG-EIDGYVSWFVGPNHTWTM 517
                 778999*********************************************************..5678*********98.789*************** PP

        SKN1 395 kakalgpngnigqRliseepmsiilnlgisnnfaaidwkelefpatlriDyvRlyqeedees..vgCDPedyptadYiekhkeaYenanltsweeagye 491
                  ++a+gpngn+g+R+iseepmsi++nlgisnn+a++++++l+fpat++iDy+R+yq++++es  +gCDP++ypt++Yi++h+ aY+nan tswe+ gye
  EPX73038.1 518 LGAAVGPNGNVGARQISEEPMSIVFNLGISNNWAYYYFRDLHFPATMSIDYIRIYQDPEDESmhIGCDPPGYPTTEYIANHPIAYRNANKTSWESCGYE 616
                 ********************************************************998877679********************************** PP

        SKN1 492 fpknklldec 501
                 +pkn+l+++c
  EPX73038.1 617 WPKNSLMHGC 626
                 ********99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (628 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       549  (0.0306208); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.31s 00:00:00.94 Elapsed: 00:00:00.48
# Mc/sec: 3928.52
//
Query:       EPX73039.1  [L=378]
Description: threonine aldolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      2e-80  270.2   0.0    2.6e-80  269.8   0.0    1.1  1  Beta_elim_lyase  Beta-eliminating lyase
     0.0037   16.5   0.0     0.0047   16.1   0.0    1.3  1  Aminotran_1_2    Aminotransferase class I and II
     0.0075   14.8   0.0      0.012   14.2   0.0    1.3  1  Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
  ------ inclusion threshold ------
      0.022   13.7   0.0      0.032   13.2   0.0    1.3  1  Aminotran_5      Aminotransferase class-V
      0.047   13.0   0.1       0.11   11.8   0.0    1.6  2  DegT_DnrJ_EryC1  DegT/DnrJ/EryC1/StrS aminotransferase family


Domain annotation for each model (and alignments):
>> Beta_elim_lyase  Beta-eliminating lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  269.8   0.0   7.3e-84   2.6e-80       1     284 [.      32     308 ..      32     317 .. 0.96

  Alignments for each domain:
  == domain 1  score: 269.8 bits;  conditional E-value: 7.3e-84
                      E-S-GGG----HHHHHHHHCS----CCCT--HHHHHHHHHHHHHTT-SEEEEES-HHHHHHHHHHHH-.-TTEEEEEETT-HHHHSSTTHHHHC CS
  Beta_elim_lyase   1 DLlSDsvtkgteamsdaqaaamlGdesYgedktvnrLedavaelfgkeaalfvpqGtaAnsillkill.qrgeevivtepahihfdetgaiael 93 
                      D++SD++t ++++m++ +++a+ Gd++Y+ed+++++Le++va+l gkea+lfv++Gt++n+++++++l q+ ++++++++ahi+++e+gai  +
       EPX73039.1  32 DFRSDTFTVPSDEMRQVMFEATDGDAVYEEDEDTKKLEEYVAKLSGKEAGLFVTSGTQGNQLCIRAHLhQPPHSIVCDDRAHIYNWEAGAIGLF 125
                      9********************************************************************************************* PP

                      C--EEEEE-EBTTTBE-HHHHHHHS--S-T.TS-EEEEEEEESSBTTTTTB---HHHHHHHHHHHHHCT-EEEEEETTHHHHHHHHTS-CHHHH CS
  Beta_elim_lyase  94 agvklrdlknkeaGkmdlekleaaikevga.heekiklisltvTnntagGqvvsleelrevaaiakkygiplhlDgARfanaakslgeivkemf 186
                       ++ +r++  k+  ++++e++e+++   ++ h+++++li+l++T++   G v+++ee+++++a+ak+y+iplh+DgAR+++a+++ g++++e++
       EPX73039.1 126 TQSIVRPVAPKNGKYITAEEVESKLIVGDDiHFAPTSLICLENTIK---GSVIPIEEIARISALAKAYKIPLHCDGARLWDASAATGVSIEEYC 216
                      9999********889*******966665556***************...********************************************* PP

                      TTSSEEEEESSSTT--SS-EEEEE-HH....HHHHHHHHHHHHT---SSTHHHHH..HHHHHHHHSSTTHHHHHHHHHHHHHHHHHCT--EEEC CS
  Beta_elim_lyase 187 syvDsvtmslkKdllanvGgvlafrddeledylaerveqrkylggglrqagvlaaleagiraleeglaslerdhktaeqlaeklelvrlaiprr 280
                      sy+D+v+++l+K+l+a++G+v+++ +d     ++++ ++rk++ggglrq+g+laa  ag+ +++++  +l+r h+  ++ +e +e + + ++  
       EPX73039.1 217 SYFDTVSLCLSKGLGAPIGSVIVGPKD----VMNKAKWFRKAYGGGLRQSGMLAA--AGLLSIKQNFPLLSRVHRYCREFTEYAESLGVEFEVT 304
                      ***************************....************************..***************************9999876666 PP

                      CGTT CS
  Beta_elim_lyase 281 vytq 284
                      ++t 
       EPX73039.1 305 PETS 308
                      6554 PP

>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   1.3e-06    0.0047      31     189 ..      50     199 ..      30     314 .. 0.76

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.3e-06
                    HHHHTSTTST-BTTHHHHHHHHHHHHHCTCTTCHTTGGEGEEEESHHHHHHHHHHHHHHHTTT-EEEEEESS-T.HHHHHHHHTTSEEEEEEBEET CS
  Aminotran_1_2  31 alaggtlneygpidglpeleealakflgrseklklkreaavvvgsGagaliealifllklnpgdeilvpdptya.syknilrlsggevvryplyse 125
                    ++a+ + + y   +  ++lee +ak+ g        +ea + v+sG++ ++  + + l ++p   i+ +d  +  + + ++     + +  p+ ++
     EPX73039.1  50 FEATDGDAVYEEDEDTKKLEEYVAKLSG--------KEAGLFVTSGTQGNQLCIRAHL-HQPPHSIVCDDRAHIyNWEAGAIGLFTQSIVRPVAPK 136
                    55677777777777789***********........999*******************.7888899999888751444444333333444455588 PP

                    TTTEE-HHHHHHHHTTHHCTTE...TEEEEEEESS-TTT--B--HHHHHHHHHHHHHTTEEEEEEET CS
  Aminotran_1_2 126 edfhldlealeealkeapegnk...ktkvilvesphNPtGtvatleeleklldlakkynlllfvDea 189
                    ++  +++e++e +l     +++   +t +i++e+     G+v++ ee+  + +lak+y++ l +D a
     EPX73039.1 137 NGKYITAEEVESKLIV--GDDIhfaPTSLICLENTI--KGSVIPIEEIARISALAKAYKIPLHCDGA 199
                    ************8865..33336679*******975..8***********************99965 PP

>> Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.0   3.3e-06     0.012      53     174 ..      64     198 ..      14     210 .. 0.73

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3.3e-06
                      HHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHTTS-TTEE.EEEEST..SSH...H.....HHHHHHHTHHHTTCEEEEESTTSHHHHHHHCC CS
  Cys_Met_Meta_PP  53 trsvleeriaaLeggeaalavssGmaAiaaailallkaGde.ivvsdd..lYg...g.....tqrllkkvlkklgievkfvdtsdleelekaik 135
                       ++ lee +a+L g ea+l v+sG+   ++ i+a l++  + iv++d   +Y+   g     tq++++ v++k g  ++  ++++   +   i+
       EPX73039.1  64 DTKKLEEYVAKLSGKEAGLFVTSGTQGNQLCIRAHLHQPPHsIVCDDRahIYNweaGaiglfTQSIVRPVAPKNGKYITAEEVESKLIVGDDIH 157
                      4689*****************************9999977626665533367533323333477777777888776666666655555555555 PP

                      T.TEEEEEEE.SS-TTTT----HHHHHHHHHHTT-EEEEEG CS
  Cys_Met_Meta_PP 136 e.ntklvylE.tptnpllkvvDiekiaklakkagvlvvvDn 174
                         t+l+ lE t+   ++ +  i++i++lak+ ++++  D 
       EPX73039.1 158 FaPTSLICLEnTIKGSVIPIEEIARISALAKAYKIPLHCDG 198
                      44677777765888999999999999999999999988875 PP

>> Aminotran_5  Aminotransferase class-V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   8.9e-06     0.032      49     178 ..      69     200 ..      55     250 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 8.9e-06
                  HHHHHHHHT-STGGGEEEESSHHHHHHHHHHHCCCC-TTTSEEEEETTSHGGGTHHHHHHHHHHTEEEEEEEBETTSCBEGGGHHHH-.....-TTEE CS
  Aminotran_5  49 rekvaelinaeseeeiiftsGtteainlvalslarslkpgdeivvteaehhanlvpwqelakrtgakvkvipldeegeldldelekll.....nektk 141
                  +e va+l + e     +f+ ++t++++l +++ ++  +p  +iv  +  h  n   + ++  +t   v+ +  ++++ ++ +e+e++l      + + 
   EPX73039.1  69 EEYVAKLSGKE---AGLFVTSGTQGNQLCIRAHLH--QPPHSIVCDDRAHIYNW-EAGAIGLFTQSIVRPVAPKNGKYITAEEVESKLivgddIHFAP 160
                  55556655555...468999999999999999864..88899999999999888.8999999**********************99997855324444 PP

                  EEEEESBETTTTEB--HHHHHH...HHHHTT-EEEEE-TT CS
  Aminotran_5 142 lvaithvsnvtGtiqpveeigk...lakkkgalvlvDaaq 178
                     i+  +++ G + p+eei++   lak++++ +++D+a 
   EPX73039.1 161 TSLICLENTIKGSVIPIEEIARisaLAKAYKIPLHCDGAR 200
                  5679999******9999987652227999*********95 PP

>> DegT_DnrJ_EryC1  DegT/DnrJ/EryC1/StrS aminotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0     3e-05      0.11       7      57 ..      46      97 ..      41     108 .. 0.81
   2 ?   -3.4   0.1       1.2   4.4e+03     126     146 ..     179     199 ..     176     207 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3e-05
                     HHHHHHHHTSS-SSS.SHHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHH CS
  DegT_DnrJ_EryC1  7 leaveevlksgwlts.gpeveeFEkafaaylgvkhaiavssGtaAlhlaLra 57
                      + + e+ +++ + + ++ ++++E+ +a+  g++  + v+sGt++++l +ra
       EPX73039.1 46 RQVMFEATDGDAVYEeDEDTKKLEEYVAKLSGKEAGLFVTSGTQGNQLCIRA 97
                     45555667777555559*******************************9998 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 1.2
                      -HHHHHHHHHHCT-EEEEE-T CS
  DegT_DnrJ_EryC1 126 dmdalkaiaakhglkvieDaA 146
                      +++++ a+a+++++++  D A
       EPX73039.1 179 EIARISALAKAYKIPLHCDGA 199
                      6889999*******9999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (378 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       459  (0.025601); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.28s 00:00:00.81 Elapsed: 00:00:00.46
# Mc/sec: 2473.95
//
Query:       EPX73040.1  [L=319]
Description: mitotic spindle checkpoint protein Bub3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.7e-10   40.2   5.5      0.025   15.4   0.0    5.3  5  WD40         WD domain, G-beta repeat
    6.8e-05   23.1   0.1       0.61   10.4   0.0    4.3  5  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
  ------ inclusion threshold ------
      0.023   14.6   0.0       0.19   11.6   0.0    2.2  3  eIF2A        Eukaryotic translation initiation factor eIF2A
      0.039   13.3   0.0       0.35   10.1   0.0    2.2  2  WD40_like    WD40-like domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0      0.16     7e+02      13      36 ..      15      39 ..       6      40 .. 0.63
   2 ?    0.8   0.0      0.23     1e+03      26      36 ..      70      80 ..      47      82 .. 0.72
   3 !   11.3   0.3   0.00012      0.52      10      38 .]      94     123 ..      86     123 .. 0.83
   4 !   15.4   0.0   5.6e-06     0.025       7      38 .]     219     260 ..     214     260 .. 0.76
   5 !    8.8   0.0   0.00069       3.1      11      37 ..     275     306 ..     264     306 .. 0.68

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.16
                EEEEE.EETTSSEEEEEETTSEEEE CS
        WD40 13 vtsla.fspdgawlasGsdDgtvri 36
                ++s+   + +++ l+ Gs+D+ +++
  EPX73040.1 15 ISSVNfSPVEKDHLLIGSWDNGLKL 39
                5666422223334667999998775 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.23
                EEEETTSEEEE CS
        WD40 26 asGsdDgtvri 36
                ++Gs Dg+v +
  EPX73040.1 70 FAGSLDGSVNL 80
                46999***987 PP

  == domain 3  score: 11.3 bits;  conditional E-value: 0.00012
                 S.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  10 H.ssvtslafspdgawlasGsdDgtvriWd 38 
                 H ++v++ a+ pd   l++Gs+D++  +Wd
  EPX73040.1  94 HeKGVSCTATIPDIECLVTGSWDQSFQFWD 123
                 777888888888888899***********9 PP

  == domain 4  score: 15.4 bits;  conditional E-value: 5.6e-06
                 EESS.SS.........EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   7 ltGH.ss.........vtslafspdgawlasGsdDgtvriWd 38 
                 ++ H +          v++l f+p ++ la+++ Dg+v +Wd
  EPX73040.1 219 FKCHrQIqqqydivypVNALTFHPIHHTLATAGGDGSVAFWD 260
                 566642244566666799***********97655*******9 PP

  == domain 5  score: 8.8 bits;  conditional E-value: 0.00069
                 SSEEEEEEETTSSEEE..EEET...TSEEEEE CS
        WD40  11 ssvtslafspdgawla..sGsd...DgtvriW 37 
                 +sv+s++f+ dg++la  ++     +g+v+i+
  EPX73040.1 275 TSVSSISFNFDGSLLAvaTCAQdeaNGSVYIY 306
                 579***********863366533458888875 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.26   1.2e+03      41      80 ..      15      56 ..       7      63 .. 0.68
   2 ?    0.8   0.0      0.13     6e+02      56      75 ..      72      91 ..      65     102 .. 0.75
   3 ?   -2.0   0.0         1   4.5e+03      45      66 ..     141     162 ..     111     181 .. 0.62
   4 !   10.4   0.0   0.00014      0.61      40      89 ..     234     282 ..     224     283 .. 0.90
   5 !    7.9   0.0   0.00082       3.7      38      68 ..     274     309 ..     269     316 .. 0.76

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.26
  ANAPC4_WD40 41 vrsLaWkpdgk.lLavaysdgevrlld.aesgkvvhslsvks 80
                 ++s++++p +k  L ++  d+ ++l++ ae++++++s+s +s
   EPX73040.1 15 ISSVNFSPVEKdHLLIGSWDNGLKLVEtAEEQRCLQSYSLSS 56
                 667777765443566777777777776267777888877665 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.13
  ANAPC4_WD40 56 aysdgevrlldaesgkvvhs 75
                 +  dg+v+l+d++sg+ +  
   EPX73040.1 72 GSLDGSVNLIDISSGTHLVI 91
                 5569**********987654 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 1
  ANAPC4_WD40  45 aWkpdgklLavaysdgevrlld 66 
                  a +   ++L+ ++ + e  ++d
   EPX73040.1 141 AASSAANILVLGCTERENLVYD 162
                  3333334444444444444444 PP

  == domain 4  score: 10.4 bits;  conditional E-value: 0.00014
  ANAPC4_WD40  40 evrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                   v++L ++p  + La a  dg+v + d++  k ++ l  ++++ v+++++
   EPX73040.1 234 PVNALTFHPIHHTLATAGGDGSVAFWDIQVRKRLRVLYPSKTS-VSSISF 282
                  699***************************9999999888884.888876 PP

  == domain 5  score: 7.9 bits;  conditional E-value: 0.00082
  ANAPC4_WD40  38 dsevrsLaWkpdgklLavay.....sdgevrlldae 68 
                  + +v+s++++ dg+lLava+     ++g+v ++  e
   EPX73040.1 274 KTSVSSISFNFDGSLLAVATcaqdeANGSVYIYALE 309
                  678***************973433356666666655 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       0.4   1.8e+03     121     150 ..      72     101 ..      67     123 .. 0.76
   2 ?   -0.8   0.0      0.26   1.2e+03      75     118 ..     109     152 ..     105     159 .. 0.80
   3 ?   11.6   0.0   4.1e-05      0.19     102     177 ..     234     307 ..     213     314 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.4
                 TSSS-EEEEEETTTTEEEEEEE-TT--EEE CS
       eIF2A 121 gnlaGeleiwdvkkkkkiakaeaanatlve 150
                 g+l G++++ d ++ +++   ++++ +++ 
  EPX73040.1  72 GSLDGSVNLIDISSGTHLVIGKHEKGVSCT 101
                 789999999999988888888888877775 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.26
                 EEEESSSSCEEEEEECSCEEEEEEEEES--EEEE-TTSSEEEEE CS
       eIF2A  75 aviyGkmpakvslfdlkvkviskleeqkrNtiffspkgklvlla 118
                 +++ G  +++ +++d++ k   + ++ ++  +  s+  ++++l+
  EPX73040.1 109 CLVTGSWDQSFQFWDSRQKRAIDKKRIEKKILAASSAANILVLG 152
                 67889999999999998888888777777777777777777775 PP

  == domain 3  score: 11.6 bits;  conditional E-value: 4.1e-05
                 S--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEE..E-TT--EEEE-TTSSEEEEEE-TTT-SSS-EEEEEE CS
       eIF2A 102 krNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiaka..eaanatlvewspdgryvlTattaprlrvdngfkiws 177
                 + N++ f+p  + +++aG     G++++wd + +k +  +   ++  +++ ++ dg++++ at+a + + + ++ i+ 
  EPX73040.1 234 PVNALTFHPIHHTLATAGG---DGSVAFWDIQVRKRLRVLypSKTSVSSISFNFDGSLLAVATCA-QDEANGSVYIYA 307
                 679***********99993...59********6666655511555567899*********99998.666666666665 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   7.9e-05      0.35       5     179 ..      17     191 ..      13     194 .. 0.71
   2 ?   -3.3   0.0      0.95   4.3e+03     256     286 ..     253     283 ..     244     291 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 7.9e-05
   WD40_like   5 sidisk.kgslilyGgkddkctvlkleslesvsivesfedSvifvklldddlilvvtlDGtillslleneeevenekieedistvkvidd.klliGtnk 101
                 s+++s+ + + +l G+ d+ ++++++  ++      s++  ++ ++ l+      ++lDG + l +++ + +  + k e  +s+  +i d + l+ ++ 
  EPX73040.1  17 SVNFSPvEKDHLLIGSWDNGLKLVETAEEQRCLQSYSLSSPILTSRYLNATTAFAGSLDGSVNLIDISSGTHLVIGKHEKGVSCTATIPDiECLVTGSW 115
                 67777524567899************9999999999***********************************9999********9999876456666666 PP

   WD40_like 102 Gsiyvfskdlqleevllgq...sseIkeikiennk.iysLsesafivfdlfsqnieykisvkdiktfeiienkdilligteg 179
                  + + f      ++  + +   + +I+  ++  n+ + + +e + +v+d+ + ++  +   +  +tf+ +  +d+ +ig eg
  EPX73040.1 116 DQSFQFWDS--RQKRAIDKkriEKKILAASSAANIlVLGCTERENLVYDIRNLKLPFQ---RRPSTFKYM-TRDVCCIGGEG 191
                 666666554..23333322001334444444444414566777777777776444443...345667777.77777777665 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 0.95
   WD40_like 256 cgkvgigDiRdketfkllesgvGviydmkfe 286
                 +g v++ Di   + +++l +   ++ ++ f+
  EPX73040.1 253 DGSVAFWDIQVRKRLRVLYPSKTSVSSISFN 283
                 6888888888888887777776666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (319 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       432  (0.024095); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2296.62
//
Query:       EPX73041.1  [L=776]
Description: AP-3 adaptor complex subunit Apl6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   8.7e-114  380.9   6.4   1.1e-113  380.6   6.4    1.1  1  Adaptin_N     Adaptin N terminal region
    4.1e-19   69.2   1.7    1.3e-14   54.6   0.1    4.0  4  Cnd1          non-SMC mitotic condensation complex subunit 1
    2.3e-12   47.1   0.2      0.028   14.8   0.0    4.7  5  HEAT_2        HEAT repeats
    7.3e-11   41.4   2.5       0.27   11.6   0.0    6.6  7  HEAT          HEAT repeat
    0.00023   21.6   4.1        3.4    8.3   0.7    5.7  5  HEAT_EZ       HEAT-like repeat
     0.0064   16.8   0.1        7.2    7.0   0.0    3.8  3  Cohesin_HEAT  HEAT repeat associated with sister chromatid co
  ------ inclusion threshold ------
      0.032   14.3   0.1         24    5.2   0.0    4.6  4  Arm           Armadillo/beta-catenin-like repeat
        3.7    5.6  18.7        6.7    4.8  18.7    1.3  1  Nop14         Nop14-like family


Domain annotation for each model (and alignments):
>> Adaptin_N  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  380.6   6.4  4.8e-117  1.1e-113       4     521 ..      33     556 ..      30     558 .. 0.97

  Alignments for each domain:
  == domain 1  score: 380.6 bits;  conditional E-value: 4.8e-117
                 HCCHHHHHHCCSSS-SCHHHHHHHHHHHHHHHCT---GHHHHHHHCCCCSS-CHHHHHHHHHHHHHCTTSCCHHCCCCHHHHHHCCSSSHHHHHHHHHH CS
   Adaptin_N   4 riqqelaeilnsnkdddekkkeavkkliylialGedvsflffevvklvaskdfelKrlvYlylellaeesedlalLvtnslqkDlkdpnqlirglALrv 102
                  ++++l+++l+sn  +d  k+ea+  +i ++++Gedvs +f++vvklv s+++e++rlv++yl+ +ae ++dlalL +n++qk l d+n+lir+ A+r+
  EPX73041.1  33 LSHTDLVRLLESN--SDTGKLEALHYIIVQMMHGEDVSIYFPDVVKLVVSENPEIRRLVHIYLTHYAEFNPDLALLCVNTIQKTLYDKNPLIRAAAIRA 129
                 5799*********..************************************************************************************ PP

                 HCCC--CCCHHHHHHHHHHHHT-SSHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHCTT-SSHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHH CS
   Adaptin_N 103 LssirvpelaedlapaikkllkdrspyvrkkAalailklykkdpdllrkqlveeikellsdkdpgvvlaAvalleeikkndrlllkllpklvrrLcnll 201
                 +ssirvp +  +++  i++ ++d+sp vr+ Aalailk+ ++dp+ + + lve+i  ll d++p+vv aA+a++ee+ ++++    + +  +rr+c+l+
  EPX73041.1 130 MSSIRVPAINGIVLLGIQQSMNDSSPLVRQRAALAILKCHSLDPSYYDQ-LVECIRLLLLDSHPLVVPAALAAFEEV-CPENF--IIFHPAFRRICTLF 224
                 **********************************************955.8**************************.*****..9************* PP

                 HCS-HHHHHHHHHHHCC---SSHHHH..........HHHHHHHCGGCGCSSCHHHHHHHHHCCHCCCCSTHHHCCHHCHHHHHHSSCCTCHHHHHCHHH CS
   Adaptin_N 202 teldpwlqvkiiklltrlarqepeersk........kellesllnllqssnnaVlletvnlivelapknelivlavnaLvrllsskdenlryvaLrtll 292
                 + +++w +++ +k + r+ar + ++++         k++les+  +++s  ++ +l+ + ++++lap+ne ++++v+ L +ll++k++ +r+ +L  + 
  EPX73041.1 225 SKFNDWDKTVALKSMIRYARLNLPKPELtntvhkdlKLFLESVDYCFYSLLPSTVLAGCCAYYYLAPTNE-LHKIVQPLLQLLTEKPT-VRLNTLLYIR 321
                 **************************4456666788999999999999**********************.7****************.********** PP

                 HHHHHXXTTTTTTTCCCCSXXTTSXHHHHHHHHHHHCCCXXTTTHHHHHHHHHHHTTSSXXHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHTTXXH CS
   Adaptin_N 293 kivkkepkavqhldlkifllktdddvsirlkaldlllklvdesNvkeivkeLkkyvkevadedfksklvkaIgrlaekfatdaewvldvllellslsge 391
                 +i  ++ ++++++d+k+f+l  +ddv+ ++ +l++ + l+d +N++ ++ eL  yv ++++  + s +v++Ig++a++  ++++ +l+ ll++l++ ++
  EPX73041.1 322 HITFSR-PELFKNDIKSFFLFGSDDVKTSIVKLEVISHLLDPENANYVFPELCHYVFNHSNSRVASTAVRTIGKFAKNTCSMTSLCLSSLLRMLESGND 419
                 ******.*************************************************9999999************************************ PP

                 HHHHHHHHHHHHHHHHSTTTSTTCHHHHCCTCCGXXSHHHHHHHHHHHHHTTTTXTT...HHHHHHCTTTTTTTSXHHHHHHHHHHHHHHHHCXGCC.T CS
   Adaptin_N 392 svkdeivevirdliqkvpelheeiiekLaellekieseearaaaiWllGeygelvsntesasdllrslaekfvlesekvklqiltalvKlyltspdket 490
                 +++ e+++++r li++ p++  + +  La ++ek  ++ a+aa +Wl+ e+ +++ +   a+dllr   + f +e+ +vk+qil ++vKly+ +++ e+
  EPX73041.1 420 FIVTEAASSLRILIHNDPQE--IYLIYLASMYEKFHVPVAKAATLWLISEHIQQMMH--VAPDLLRIAVKTFADEELEVKYQILDLAVKLYVANSTYEQ 514
                 *******************9..67999******************************..********************************99998777 PP

                 HX..........HHHHHHHHHHH.XXSHHHHHHHHHHHHHHC CS
   Adaptin_N 491 qe..........kliqlvlslat.ssdlevrdRaveylqlls 521
                 +e          +l+++vls+ + + ++++rdRa+ y++l s
  EPX73041.1 515 NEsvlekpnpvnLLYKYVLSIVHfDMSYDLRDRARYYKSLTS 556
                 779999999999************99***********99875 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0      0.12   2.7e+02      60     102 ..      71     113 ..      57     120 .. 0.79
   2 !   54.6   0.1   5.7e-18   1.3e-14       1     127 [.     121     243 ..     121     262 .. 0.90
   3 ?   -0.4   0.0      0.45     1e+03      16      52 ..     292     329 ..     279     340 .. 0.75
   4 !    8.7   0.0   0.00075       1.7      33     101 ..     380     448 ..     359     478 .. 0.83

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.12
        Cnd1  60 lselaklleDenprVvanalaalteiseksenaiynllpdiis 102
                 + ++ kl+  enp+++ ++++ lt ++e ++++++  + +i +
  EPX73041.1  71 FPDVVKLVVSENPEIRRLVHIYLTHYAEFNPDLALLCVNTIQK 113
                 5677899999****************99998777655555544 PP

  == domain 2  score: 54.6 bits;  conditional E-value: 5.7e-18
        Cnd1   1 liRalairtlgcirvpnlveylvepLrkrLkDedpyVRktaaivvakLilndmvkekgflselaklleDenprVvanalaalteiseksenaiynllpd 99 
                 liRa air++++irvp++   ++  ++++++D++p VR+ aa++++k ++ d     ++++ ++ ll D++p Vv  alaa++e+  ++  ++   ++ 
  EPX73041.1 121 LIRAAAIRAMSSIRVPAINGIVLLGIQQSMNDSSPLVRQRAALAILKCHSLDPSYYDQLVECIRLLLLDSHPLVVPAALAAFEEVCPENFIIFHPAFRR 219
                 79**********************************************999999999*******************************94444555666 PP

        Cnd1 100 iisklsdalnecsewgqitilefLlsyi 127
                 i+  +s    +++ w+ ++ l+++++y 
  EPX73041.1 220 ICTLFS----KFNDWDKTVALKSMIRYA 243
                 666666....8**************996 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.45
        Cnd1  16 pnlveylvepLrkrLkDedpyVRktaaivvakL..ilnd 52 
                 +n + ++v+pL + L+  +p+VR ++++ + ++   +++
  EPX73041.1 292 TNELHKIVQPLLQLLTE-KPTVRLNTLLYIRHItfSRPE 329
                 56677788888888875.699999999999888644445 PP

  == domain 4  score: 8.7 bits;  conditional E-value: 0.00075
        Cnd1  33 edpyVRktaaivvakLilndmvkekgflselaklleDenprVvanalaalteiseksenaiynllpdii 101
                 +++ V  ta+ ++ k  +n+    +  ls l+++le  n+ +v+ a ++l  + ++++++iy +   ++
  EPX73041.1 380 SNSRVASTAVRTIGKFAKNTCSMTSLCLSSLLRMLESGNDFIVTEAASSLRILIHNDPQEIYLIYLASM 448
                 67889999*******99998888888******************************9999998765544 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0     0.073   1.6e+02      33      56 ..      71      94 ..      38     107 .. 0.74
   2 !   14.8   0.0   1.3e-05     0.028       6      61 ..      76     136 ..      71     144 .. 0.82
   3 !   13.5   0.1   3.2e-05     0.071       7      56 ..     148     203 ..     142     213 .. 0.81
   4 ?   -0.5   0.0      0.73   1.6e+03       2      22 ..     300     318 ..     292     332 .. 0.60
   5 !   12.0   0.0   9.2e-05      0.21       2      57 ..     370     431 ..     351     465 .. 0.69

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.073
      HEAT_2 33 lpaLvellededpavRraaaeaLg 56
                +p +v+l+ +e+p++Rr +  +L 
  EPX73041.1 71 FPDVVKLVVSENPEIRRLVHIYLT 94
                78899************9977776 PP

  == domain 2  score: 14.8 bits;  conditional E-value: 1.3e-05
      HEAT_2   6 qalendpdpevrraairaLgrig..npea....lpaLvellededpavRraaaeaLgaigdp 61 
                 +++  +++pe+rr + + L  ++  np++    ++++ + l d++p +R+aa++a++ i+ p
  EPX73041.1  76 KLV-VSENPEIRRLVHIYLTHYAefNPDLallcVNTIQKTLYDKNPLIRAAAIRAMSSIRVP 136
                 544.68999999999999996653335555788************************99877 PP

  == domain 3  score: 13.5 bits;  conditional E-value: 3.2e-05
      HEAT_2   7 alendpdpevrraairaLgrignp......ealpaLvellededpavRraaaeaLg 56 
                 +  nd++p vr++a+ a+ ++++       +++++++ ll d++p v  aa  a  
  EPX73041.1 148 QSMNDSSPLVRQRAALAILKCHSLdpsyydQLVECIRLLLLDSHPLVVPAALAAFE 203
                 4559********9999999888764456667799999999********99988765 PP

  == domain 4  score: -0.5 bits;  conditional E-value: 0.73
      HEAT_2   2 daLlqalendpdpevrraair 22 
                 ++Llq+l+  + p vr +++ 
  EPX73041.1 300 QPLLQLLT--EKPTVRLNTLL 318
                 44555553..44555555444 PP

  == domain 5  score: 12.0 bits;  conditional E-value: 9.2e-05
      HEAT_2   2 daLlqalendpdpevrraairaLgrignpea......lpaLvellededpavRraaaeaLga 57 
                 + L+ ++ n+++  v+ +a+r++g+++  ++      l  L+++le+ +  +  +aa +L  
  EPX73041.1 370 PELCHYVFNHSNSRVASTAVRTIGKFAKNTCsmtslcLSSLLRMLESGNDFIVTEAASSLRI 431
                 45667777777777777777777766554333444557777777777777777777777765 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0       1.1   2.4e+03       5      20 ..      74      89 ..      71      99 .. 0.76
   2 !   11.6   0.0   0.00012      0.27       3      27 ..     109     133 ..     107     133 .. 0.90
   3 !   11.2   0.0   0.00016      0.35       5      24 ..     146     165 ..     143     169 .. 0.91
   4 ?   -0.8   0.1       1.1   2.5e+03       3      28 ..     181     206 ..     179     208 .. 0.78
   5 ?   -0.7   0.0       1.1   2.4e+03       3      27 ..     300     323 ..     298     325 .. 0.74
   6 !    9.8   0.0   0.00044      0.99       2      30 ..     369     398 ..     368     399 .. 0.90
   7 ?   -0.2   0.0      0.72   1.6e+03       2      25 ..     407     430 ..     406     434 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 1.1
                HHHHHT-SSHHHHHHH CS
        HEAT  5 llkllsDpspeVReaA 20
                ++kl  +++pe+R+ +
  EPX73041.1 74 VVKLVVSENPEIRRLV 89
                6788889******865 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 0.00012
                 HHHHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   3 PlllkllsDpspeVReaAakaLgal 27 
                 ++++k l D++p +R+aA++a+  +
  EPX73041.1 109 NTIQKTLYDKNPLIRAAAIRAMSSI 133
                 789*****************98765 PP

  == domain 3  score: 11.2 bits;  conditional E-value: 0.00016
                 HHHHHT-SSHHHHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAakaL 24 
                 +++ ++D+sp VR+ Aa+a+
  EPX73041.1 146 IQQSMNDSSPLVRQRAALAI 165
                 78999************998 PP

  == domain 4  score: -0.8 bits;  conditional E-value: 1.1
                 HHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   3 PlllkllsDpspeVReaAakaLgala 28 
                  ++  ll D++p V  aA+ a+ +++
  EPX73041.1 181 ECIRLLLLDSHPLVVPAALAAFEEVC 206
                 56666679999999999999998887 PP

  == domain 5  score: -0.7 bits;  conditional E-value: 1.1
                 HHHHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   3 PlllkllsDpspeVReaAakaLgal 27 
                  +ll+ll  + p VR ++++ + ++
  EPX73041.1 300 QPLLQLL-TEKPTVRLNTLLYIRHI 323
                 5667755.78899**9999888766 PP

  == domain 6  score: 9.8 bits;  conditional E-value: 0.00044
                 HHHHHHHH.T-SSHHHHHHHHHHHHHHHHC CS
        HEAT   2 lPlllkll.sDpspeVReaAakaLgalaev 30 
                 +P l++   ++++++V ++A++++g++a++
  EPX73041.1 369 FPELCHYVfNHSNSRVASTAVRTIGKFAKN 398
                 789999966******************996 PP

  == domain 7  score: -0.2 bits;  conditional E-value: 0.72
                 HHHHHHHHT-SSHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLg 25 
                 l  ll++l++ + ++   Aa +L 
  EPX73041.1 407 LSSLLRMLESGNDFIVTEAASSLR 430
                 6789**********9999999986 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.0   0.0     0.008        18      34      54 ..     112     132 ..     103     133 .. 0.85
   2 ?    4.8   0.1     0.018        41      34      52 ..     147     165 ..     142     166 .. 0.82
   3 !    8.3   0.7    0.0015       3.4       2      52 ..     156     202 ..     155     205 .. 0.88
   4 ?    0.1   0.0      0.55   1.2e+03      22      48 ..     295     316 ..     280     318 .. 0.71
   5 ?    1.2   0.0      0.25   5.5e+02      38      54 ..     378     394 ..     376     395 .. 0.91

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.008
     HEAT_EZ  34 lalLnddsdeVRaaAagaLgn 54 
                  ++L d+++++RaaA++a + 
  EPX73041.1 112 QKTLYDKNPLIRAAAIRAMSS 132
                 48899************9876 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.018
     HEAT_EZ  34 lalLnddsdeVRaaAagaL 52 
                  + +nd+s++VR+ Aa a+
  EPX73041.1 147 QQSMNDSSPLVRQRAALAI 165
                 57799********999886 PP

  == domain 3  score: 8.3 bits;  conditional E-value: 0.0015
     HEAT_EZ   2 rvRraAawaLGrlaggepellqplvpeilpaLlalLnddsdeVRaaAagaL 52 
                  vR  Aa+a+      +  l++ + ++++ +   lL d++++V  aA+ a+
  EPX73041.1 156 LVRQRAALAI----LKCHSLDPSYYDQLVECIRLLLLDSHPLVVPAALAAF 202
                 59999***99....9999*************************66666665 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 0.55
     HEAT_EZ  22 lqplvpeilpaLlalLnddsdeVRaaA 48 
                 l++ v+ +l +L      ++++VR ++
  EPX73041.1 295 LHKIVQPLLQLLT-----EKPTVRLNT 316
                 5555555555555.....888999877 PP

  == domain 5  score: 1.2 bits;  conditional E-value: 0.25
     HEAT_EZ  38 nddsdeVRaaAagaLgn 54 
                 n+++++V  +A++++g+
  EPX73041.1 378 NHSNSRVASTAVRTIGK 394
                 7999***********97 PP

>> Cohesin_HEAT  HEAT repeat associated with sister chromatid cohesion
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0      0.02        46      21      39 ..     109     127 ..     108     128 .. 0.94
   2 !    7.0   0.0    0.0032       7.2      19      35 ..     142     158 ..     136     162 .. 0.90
   3 ?   -0.4   0.0      0.69   1.6e+03      16      31 ..     348     363 ..     346     363 .. 0.86

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.02
                   HHHHHHHHSS-HHHHHHHH CS
  Cohesin_HEAT  21 dtiarrltDsspsVRdAaL 39 
                   +ti++ l D  p +R+Aa+
    EPX73041.1 109 NTIQKTLYDKNPLIRAAAI 127
                   79***************97 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0032
                   HHHHHHHHHHSS-HHHH CS
  Cohesin_HEAT  19 vldtiarrltDsspsVR 35 
                   vl  i+  ++Dssp VR
    EPX73041.1 142 VLLGIQQSMNDSSPLVR 158
                   7788999*********9 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.69
                   SHHHHHHHHHHHHSS- CS
  Cohesin_HEAT  16 apevldtiarrltDss 31 
                   +++v+  ++++l+D++
    EPX73041.1 348 TSIVKLEVISHLLDPE 363
                   5789999*******95 PP

>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.1      0.63   1.4e+03      17      32 ..      38      53 ..      38      54 .. 0.84
   2 ?    5.2   0.0     0.011        24      12      40 ..     297     324 ..     296     325 .. 0.83
   3 ?   -0.5   0.0      0.63   1.4e+03      15      37 ..     370     393 ..     367     396 .. 0.87
   4 ?    1.9   0.1      0.12   2.6e+02      14      37 ..     407     430 ..     406     433 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.63
                HHHHTTTSSHHHHHHH CS
         Arm 17 LvrLLssedeevqeeA 32
                LvrLL+s +++ + eA
  EPX73041.1 38 LVRLLESNSDTGKLEA 53
                9*****9998877777 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.011
                 THHHHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm  12 GavppLvrLLssedeevqeeAawALsNLa 40 
                  +v+pL++LL+ e+++v+ + +  +++++
  EPX73041.1 297 KIVQPLLQLLT-EKPTVRLNTLLYIRHIT 324
                 58*********.99999888888887776 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.63
                 HHHHHHTT.TSSHHHHHHHHHHHH CS
         Arm  15 ppLvrLLs.sedeevqeeAawALs 37 
                 p L++    + + +v   A+++++
  EPX73041.1 370 PELCHYVFnHSNSRVASTAVRTIG 393
                 778888889************997 PP

  == domain 4  score: 1.9 bits;  conditional E-value: 0.12
                 HHHHHHHTTTSSHHHHHHHHHHHH CS
         Arm  14 vppLvrLLssedeevqeeAawALs 37 
                 +  L+r+L+s+++ +++eAa+ L+
  EPX73041.1 407 LSSLLRMLESGNDFIVTEAASSLR 430
                 6779****************9997 PP

>> Nop14  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8  18.7     0.003       6.7     345     425 ..     668     746 ..     623     765 .. 0.48

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.003
       Nop14 345 eeeeeededdfeedddlveseseeeeeeeeedeeeeedeeeeeeeeededdlsdleseeeeeedeleeelleeekkaaeek 425
                 +++ee  ++d+++++++ e++s++ee +++++eee+ed +++  +++d+d++++ + +e e+e+ l +e+ +++++  ++k
  EPX73041.1 668 QSLEEFYQSDDSSSSEEYEDDSTAEEVTDDSEEEENEDVNNG--SSDDDDNNDRVDVHEGENEESLRQEEINSNTEGYSTK 746
                 222333333333344344444444443333333333333333..3344455555555566666666555532222222211 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (776 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1067  (0.0595125); expected 358.6 (0.02)
Passed bias filter:                      538  (0.0300073); expected 358.6 (0.02)
Passed Vit filter:                        80  (0.00446204); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.75u 0.34s 00:00:01.09 Elapsed: 00:00:00.47
# Mc/sec: 4939.38
//
Query:       EPX73042.1  [L=105]
Description: ribosomal protein subunit S14 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.5e-22   78.4   1.2    2.5e-22   78.4   1.2    1.8  2  Ribosomal_S14  Ribosomal protein S14p/S29e


Domain annotation for each model (and alignments):
>> Ribosomal_S14  Ribosomal protein S14p/S29e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1     0.093   1.7e+03      27      38 ..      11      21 ..       4      24 .. 0.70
   2 !   78.4   1.2   1.4e-26   2.5e-22       3      54 .]      53     104 ..      51     104 .. 0.97

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.093
                   EE-GGG-EHHHH CS
  Ribosomal_S14 27 virkfgLsRicf 38
                    +r+f L+R+ f
     EPX73042.1 11 AYRDF-LCRNLF 21
                   56776.888877 PP

  == domain 2  score: 78.4 bits;  conditional E-value: 1.4e-26
                    -----SS..CTTT---SSS--SSSEE-GGG-EHHHHHHHTTT...TT-EE-- CS
  Ribosomal_S14   3 aklprnssptrirnrCrvtGrprGvirkfgLsRicfRelAlkgelpGvkKaS 54 
                    ++lp ns+pt+i+nrC+ tGr+rGv+r f+L R+ fR +A++++lpGv+KaS
     EPX73042.1  53 ESLPENSHPTKIKNRCVATGRGRGVFRAFRLARFAFRIKARANQLPGVRKAS 104
                    79*************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       236  (0.013163); expected 358.6 (0.02)
Passed bias filter:                      209  (0.0116571); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.34s 00:00:00.88 Elapsed: 00:00:00.55
# Mc/sec: 573.42
//
Query:       EPX73043.1  [L=402]
Description: Set1C complex subunit Swd1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.4e-13   49.0   8.5    0.00015   22.5   0.4    5.5  5  WD40         WD domain, G-beta repeat
    4.8e-07   30.0   3.6       0.35   11.2   0.0    4.8  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
     0.0003   20.8   0.2       0.28   11.0   0.0    3.0  3  eIF2A        Eukaryotic translation initiation factor eIF2A


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.0   6.2e-05      0.37       8      38 .]      23      52 ..      16      52 .. 0.84
   2 !   22.5   0.4   2.5e-08   0.00015       5      38 .]      60      94 ..      57      94 .. 0.92
   3 !    9.5   0.3   0.00033         2       9      32 ..     162     187 ..     155     192 .. 0.73
   4 ?    4.0   0.0     0.017     1e+02      10      29 ..     246     273 ..     238     284 .. 0.66
   5 ?    1.5   0.0      0.11   6.5e+02       2      37 ..     289     326 ..     288     327 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 6.2e-05
                E.SSSSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  8 t.GHssvtslafspdgawlasGsdDgtvriWd 38
                + GH   ts++f++ g+ la+G  +g v iWd
  EPX73043.1 23 RyGH--ATSVRFNKIGNVLAAGLVNGVVVIWD 52
                3478..899999**********88*******9 PP

  == domain 2  score: 22.5 bits;  conditional E-value: 2.5e-08
                EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38
                r+ltGH   v s+++s  g++l+s+ +D ++ +Wd
  EPX73043.1 60 RILTGHtRAVQSVCWSECGRYLLSAARDWKCILWD 94
                789***555****************9********9 PP

  == domain 3  score: 9.5 bits;  conditional E-value: 0.00033
                 SS.SSEEEEE.EETTSSEEEEEETTS CS
        WD40   9 GH.ssvtsla.fspdgawlasGsdDg 32 
                 G  ++vt ++ f+p+g++++sG+ +g
  EPX73043.1 162 GNsKHVTLVCiFHPSGNYIISGTSKG 187
                 66666764444***********5466 PP

  == domain 4  score: 4.0 bits;  conditional E-value: 0.017
                 SSS...EEEEE.....EETTSSEEEEEE CS
        WD40  10 Hss...vtsla.....fspdgawlasGs 29 
                 H++   v+ l+     fsp+g ++++ +
  EPX73043.1 246 HKFqdvVNRLQwnscgFSPSGEYVLATT 273
                 6333455777777777*******87654 PP

  == domain 5  score: 1.5 bits;  conditional E-value: 0.11
                 EEEEEEESSSS.EEEEEEETTSSEEE.EEETTSEEEEE CS
        WD40   2 qclrtltGHss.vtslafspdgawla.sGsdDgtvriW 37 
                 +++++l+G +    +++++p  + ++  G d g +++W
  EPX73043.1 289 SLVKILEGPKEeLVDVDWHPVLPCIVaVGLDTGAIYMW 326
                 67788888844555998888888876256578888888 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.1   0.00033         2      40      74 ..      26      60 ..      17      66 .. 0.87
   2 !   11.2   0.0   5.8e-05      0.35      37      79 ..      65     107 ..      57     116 .. 0.84
   3 !    4.6   0.1    0.0065        39      47      81 ..     174     208 ..     155     260 .. 0.50
   4 ?    2.5   0.0     0.029   1.7e+02      37      76 ..     297     337 ..     279     350 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00033
  ANAPC4_WD40 40 evrsLaWkpdgklLavaysdgevrlldaesgkvvh 74
                 + +s+++++ g++La +  +g v + d+++  v +
   EPX73043.1 26 HATSVRFNKIGNVLAAGLVNGVVVIWDISTSSVAR 60
                 67899***********************9988765 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 5.8e-05
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvk 79 
                  + + v+s++W++ g+ L  a  d ++ l d  +g v   l+++
   EPX73043.1  65 HTRAVQSVCWSECGRYLLSAARDWKCILWDLLDGSVKYVLRMS 107
                  7789**************************9999887766655 PP

  == domain 3  score: 4.6 bits;  conditional E-value: 0.0065
  ANAPC4_WD40  47 kpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  +p+g+ +  ++s+g +++++++  ++ +s +++s+
   EPX73043.1 174 HPSGNYIISGTSKGWLHVIEINPIRIKSSNRITSQ 208
                  55555555555555555555444444333333333 PP

  == domain 4  score: 2.5 bits;  conditional E-value: 0.029
  ANAPC4_WD40  37 edsevrsLaWkpd.gklLavaysdgevrlldaesgkvvhsl 76 
                  +++e  ++ W+p    + av+ + g++ + ++e+++  +++
   EPX73043.1 297 PKEELVDVDWHPVlPCIVAVGLDTGAIYMWSVEQKESWSAF 337
                  5667778888886245789**************99987766 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.0   4.7e-05      0.28     103     166 ..      27      89 ..      17      92 .. 0.82
   2 ?   -0.2   0.0      0.13     8e+02     144     164 ..     166     186 ..     157     199 .. 0.78
   3 !    5.1   0.0    0.0032        19      99     153 ..     253     308 ..     232     316 .. 0.63

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 4.7e-05
                 --EEEE-TTSSEEEEE-TTSSS-EEEEEETT..TTEEEEEEE-TT--EEEE-TTSSEEEEEE-TTT CS
       eIF2A 103 rNtiffspkgklvllaGfgnlaGeleiwdvk..kkkkiakaeaanatlvewspdgryvlTattapr 166
                 + ++ f++ g++ l aG+   +G + iwd +  ++  i + +     +v ws +gry+l a   ++
  EPX73043.1  27 ATSVRFNKIGNV-LAAGLV--NGVVVIWDIStsSVARILTGHTRAVQSVCWSECGRYLLSAARDWK 89 
                 567888888985.568875..69******997678888888888889999**********998887 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.13
                 TT--EEEE-TTSSEEEEEE-T CS
       eIF2A 144 anatlvewspdgryvlTatta 164
                   + ++ ++p+g+y++  t+ 
  EPX73043.1 166 HVTLVCIFHPSGNYIISGTSK 186
                 457789999999999987765 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.0032
                 EEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETT..TTEEEEEEE-TT--EEEE-T CS
       eIF2A  99 eeqkrNtiffspkgklvllaGfgnlaGeleiwdvk..kkkkiakaeaanatlvewsp 153
                 ++ + N+  fsp+g++vl   + ++a ++ +w++   ++ ki +  +++ ++v+w+p
  EPX73043.1 253 NRLQWNSCGFSPSGEYVLATTY-QMAHAIYVWERGmgSLVKILEGPKEELVDVDWHP 308
                 4455677777777777665554.4556777777664555555555566667777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (402 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       573  (0.0319594); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.70u 0.35s 00:00:01.04 Elapsed: 00:00:00.56
# Mc/sec: 2157.12
//
Query:       EPX73044.1  [L=362]
Description: hypothetical protein SOCG_00801 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.01   15.3   0.9       0.01   15.3   0.9    2.1  2  CcmB      CcmB protein
        1.9    8.3  14.0      0.091   12.5   2.0    2.9  2  DUF2157   Predicted membrane protein (DUF2157)


Domain annotation for each model (and alignments):
>> CcmB  CcmB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.8      0.15   1.4e+03      97     127 ..      57      87 ..      52     105 .. 0.75
   2 ?   15.3   0.9   1.2e-06      0.01     145     202 ..     225     282 ..     214     295 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.15
        CcmB  97 Ahwlltglplvllapllalllnleaaalgll 127
                  + l   l l+ll++++ + + lea  ++ +
  EPX73044.1  57 SNSLSVSLTLLLLSTVFLVYMTLEALKTKNT 87 
                 5677788899999999999999988766544 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 1.2e-06
        CcmB 145 gaAltvgLkrgglLlslLvlPliiPvlifaveaveaaaegldveaalalllaltvvtl 202
                 +a +   ++  +l+l++Lv+Pl+i vli+a   v+  +  l +   +++ll +  +  
  EPX73044.1 225 YAMVISEINTCELILTILVIPLTIIVLIVALYGVTHESRALMYFCEFMFLLNIAYILF 282
                 555666788999**************************99999999999998876655 PP

>> DUF2157  Predicted membrane protein (DUF2157)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   2.0     1e-05     0.091      70     119 ..      65     114 ..      56     119 .. 0.72
   2 ?    0.0   4.1     0.072   6.5e+02      59     113 ..     230     280 ..     216     319 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1e-05
     DUF2157  70 llvllllslllgavlwrdrrvpprlgeallllaalllgaaialvgqifql 119
                  l+ll  ++l+ + l+  + ++ +   al+ ++  l++ +i+ ++qi+++
  EPX73044.1  65 TLLLLSTVFLVYMTLEALKTKNTVQVAALCCFHIDLFLLSIIQISQIYHI 114
                 333333333333444444478889999999*******************8 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.072
     DUF2157  59 qglsrlvkfllllvllllslllg.avlwrdrrvpprlgeallllaalllgaaialv 113
                  +++  + +l +lv+ l  ++l+ a+ + +       ++al+++  ++++ +ia++
  EPX73044.1 230 SEINTCELILTILVIPLTIIVLIvALYGVT-----HESRALMYFCEFMFLLNIAYI 280
                 556666666666666666666663555553.....347799999999999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (362 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1005  (0.0560544); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.35s 00:00:01.01 Elapsed: 00:00:00.55
# Mc/sec: 1974.78
//
Query:       EPX73045.1  [L=409]
Description: nitrogen permease regulator family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   5.8e-114  381.2  12.8    1.7e-87  294.0   8.8    3.0  2  NPR2      Nitrogen permease regulator 2
  ------ inclusion threshold ------
       0.03   13.1   1.1       0.94    8.2   0.0    2.8  3  NPR3      Nitrogen Permease regulator of amino acid transport


Domain annotation for each model (and alignments):
>> NPR2  Nitrogen permease regulator 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  294.0   8.8   1.9e-91   1.7e-87       3     305 ..      19     293 ..      17     299 .. 0.97
   2 !   83.9   0.1   1.1e-27   9.6e-24     340     439 ..     295     401 ..     291     402 .. 0.93

  Alignments for each domain:
  == domain 1  score: 294.0 bits;  conditional E-value: 1.9e-91
        NPR2   3 ikaifyavFhpteGtkivhqvPegsivtssesdekealFeFdtvknyviPkpqlcnrllslkinkykvlgyPvnienekYsRneFtFnfafvidydesd 101
                 + aif+a F p +G ++  + P gs++ +  +  k+ l +F+ + +yviPk +lcn+ ++++ n+y+++g+P++i  ++Y+Rn  +Fn+++v++++  d
  EPX73045.1  19 LLAIFFAIFDPLQGPIVACEAPTGSVSYQ--DGGKSLLIPFENISDYVIPKRELCNKTITVCTNHYQIIGHPISIFGSNYERNTLIFNMCMVFHEE-ED 114
                 689*********************98776..89999**********************************************************99.9* PP

        NPR2 102 ttpYesvvkrlgrllrvlEeqnkfLskedkdvvffksaklaeadatvnvpgasklssieslieqileDLnnysEcviplddsnsvdlKLfPilpePvni 200
                  ++Y + vkrl+r l+vlE+q+ ++s+ +k                        +s i s+ie+ileD+nn+ Ec+i+ldd+ns+++KLfP  p P+ +
  EPX73045.1 115 SACYIPLVKRLARNLEVLEKQSRYISDIKK------------------------RSVIFSVIEEILEDMNNFCECMIQLDDQNSINIKLFPSFPSPPAV 189
                 **************************9998........................4789***************************************** PP

        NPR2 201 kayqvPiatvklsslvdvnwDltlkkilpyinGinsvkriaeladadlsLtkqciqhLlyYkcielldiFqfsniYaptneigdFlkdegeiadeCqay 299
                 k ++vPi+t +l  l+d+nwD+t++++ pyinGinsv+riaela++d++   +c+ h lyY+c+ + diFqf niYa t +  d l+d+   ++eC  y
  EPX73045.1 190 KGFHVPILTAQLDLLMDKNWDMTVQRVYPYINGINSVQRIAELANVDYDSCLKCMEHFLYYGCLIIADIFQFHNIYAMTTNAADLLQDP-VFQEECVSY 287
                 *****************************************************************************************.9******** PP

        NPR2 300 vvvees 305
                 v  + +
  EPX73045.1 288 VSFQGT 293
                 *98855 PP

  == domain 2  score: 83.9 bits;  conditional E-value: 1.1e-27
        NPR2 340 vkvpskttlfrLyrslkqgqtvkeWvlqekkllagiDvrRliqFGvlkgliyrvhkypilnssak.......antllksldglkslDellkelkvkeek 431
                  k ++++++frLy sl+qg  vk+W+ ++++   g+DvrRli FG +kgliyrvhkyp ++ ++        ++ ll++ldg++++Del+ ++k +++ 
  EPX73045.1 295 SKNVTFAKIFRLYCSLRQGLRVKDWMNENREVFRGLDVRRLISFGTIKGLIYRVHKYPYIERKNTqakltfeEERLLNMLDGTHHFDELCINFKKSPKL 393
                 5678899***************************************************99886657889999999********************9999 PP

        NPR2 432 leeklkkt 439
                 ++e + k+
  EPX73045.1 394 INEMISKL 401
                 99998875 PP

>> NPR3  Nitrogen Permease regulator of amino acid transport activity 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.0   0.00011      0.94       7      38 ..      60      91 ..      55     101 .. 0.87
   2 ?    1.5   0.3     0.011     1e+02     151     204 ..     116     171 ..     100     179 .. 0.79
   3 ?    0.2   0.0     0.028   2.5e+02     345     388 ..     229     272 ..     204     312 .. 0.79

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00011
        NPR3  7 laellsPerelcntrFeltvDdlaFlGlPvhv 38
                +++ + P+relcn+   ++ +++  +G+P+ +
  EPX73045.1 60 ISDYVIPKRELCNKTITVCTNHYQIIGHPISI 91
                667789************************86 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.011
        NPR3 151 emYenvvkklsaalkyeQaksdYVs..kEcekilklkekalkeskklkelyreile 204
                   Y   vk+l+ +l  ++++s Y+s  k  + i ++ e++l++ +++ e++ ++ +
  EPX73045.1 116 ACYIPLVKRLARNLEVLEKQSRYISdiKKRSVIFSVIEEILEDMNNFCECMIQLDD 171
                 5788889999999**********984456778999999999998888877766655 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.028
        NPR3 345 vsesnslelsqirslarhLiywRrArvIdplssrdvYivsPlad 388
                 ++e  ++++++  ++ +h++y+   ++ d+ + +++Y++  +a 
  EPX73045.1 229 IAELANVDYDSCLKCMEHFLYYGCLIIADIFQFHNIYAMTTNAA 272
                 5556788999999************************9988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (409 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       658  (0.0367003); expected 358.6 (0.02)
Passed bias filter:                      503  (0.0280551); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.74u 0.31s 00:00:01.05 Elapsed: 00:00:00.55
# Mc/sec: 2253.94
//
Query:       EPX73046.1  [L=516]
Description: ARS-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.3e-54  182.1   2.4    1.6e-53  181.0   2.0    1.8  2  DDE_1        DDE superfamily endonuclease
    8.2e-24   83.1   1.2    1.8e-23   82.0   0.4    2.1  2  HTH_ABP1_N   Fission yeast centromere protein N-terminal doma
    1.7e-14   53.6   0.2    5.7e-14   51.9   0.2    2.0  1  HTH_Tnp_Tc5  Tc5 transposase DNA-binding domain
  ------ inclusion threshold ------
      0.033   14.4   0.3      0.086   13.0   0.3    1.6  1  Hfx_Cass5    Integron Cassette Protein Hfx_Cass5
       0.71    9.8   4.1        0.2   11.5   0.3    2.0  2  Arch_fla_DE  Archaeal flagella protein


Domain annotation for each model (and alignments):
>> DDE_1  DDE superfamily endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.89   3.2e+03     116     139 ..      33      56 ..      27      90 .. 0.68
   2 !  181.0   2.0   4.4e-57   1.6e-53       2     175 .]     210     386 ..     209     386 .. 0.98

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.89
       DDE_1 116 ldqgvvselKarYrrqllqallee 139
                  ++  ++ +K+++ r l q  + +
  EPX73046.1  33 TQKDLIDWFKEHFGRTLAQSTVST 56 
                 455555556666655555555444 PP

  == domain 2  score: 181.0 bits;  conditional E-value: 4.4e-57
       DDE_1   2 erltvllcanaagsekLkplvigkaksprafkngektkkkldveyksnrkawltssifeeWLkvfdkrleaekrkilLlldssrshe.tvel...lese 96 
                 +r t++lc+na+ se+L+++v+g++k p+af++ ++ ++ ++v+++sn++aw+t+s++eeWL++fd++++  +rk+lLllds   he ++e    ++++
  EPX73046.1 210 ARFTITLCCNADASERLPLWVVGYSKRPKAFRSKNVYPEAMNVQWRSNGTAWVTNSLMEEWLRWFDEKMK--GRKVLLLLDSLSPHEcALEAirnSNNN 306
                 689*******************************************************************..***************98888898899* PP

       DDE_1  97 lqniklvflPassasllqPldqgvvselKarYrrqllqalleeqnrlskeqkkltlldalkfikkAwn.avsketiksaf 175
                 l+++k++fl ++s ++ +P+d g+++++K++Yr  + +++  e+++++++ k++++ +al++i  +w  ++s e+i ++f
  EPX73046.1 307 LKHVKVAFLTSESRNITHPFDCGIMETFKTHYRLRWARYMYTEMQSQKDPLKTVNVYKALQWITESWHvDISNEDIITCF 386
                 *****************************************************************************998 PP

>> HTH_ABP1_N  Fission yeast centromere protein N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.0   0.4     5e-27   1.8e-23       1      60 [.       9      68 ..       9      69 .. 0.98
   2 ?   -3.6   0.0       2.6   9.5e+03      36      46 ..     485     495 ..     479     499 .. 0.77

  Alignments for each domain:
  == domain 1  score: 82.0 bits;  conditional E-value: 5e-27
  HTH_ABP1_N  1 rRkaiskeqkkaLRawafqqnprpsqkaliaWFeqeygqkisqstvSeiLSskYayLDda 60
                rR+ +++++kka R+++f+++++p+qk+li+WF++++g++++qstvS+iLS k ayLD+ 
  EPX73046.1  9 RRQGLTQDEKKAFRDYYFSLTEKPTQKDLIDWFKEHFGRTLAQSTVSTILSPKHAYLDSQ 68
                89********************************************************86 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 2.6
  HTH_ABP1_N  36 eygqkisqstv 46 
                  y+q+i  ++v
  EPX73046.1 485 YYQQPIEDGSV 495
                 48999999988 PP

>> HTH_Tnp_Tc5  Tc5 transposase DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.9   0.2   1.6e-17   5.7e-14       1      63 [.      83     146 ..      83     148 .. 0.96

  Alignments for each domain:
  == domain 1  score: 51.9 bits;  conditional E-value: 1.6e-17
                  THHHHHHHHHHHHHHC-CT---SCHHHHHHHHHHH.HHSSSCT-TT-S--CHHHHHHHHHTS-- CS
  HTH_Tnp_Tc5   1 spelEkaLleWirqlrergipitgelirekAqela.slaadlgepdfkaSkgWldrFkkRhglk 63 
                  +p lE aL eW +q  +r  +++  ++r +A+ ++   +++ + p++++S+gWl++Fk+Rh+l+
   EPX73046.1  83 YPALESALFEWQQQEEKRSGTVSCDQLRLAALDIWkTIPEYQNIPTPSFSNGWLEKFKRRHPLS 146
                  799*********************************99999********************986 PP

>> Hfx_Cass5  Integron Cassette Protein Hfx_Cass5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.3   2.4e-05     0.086      27      64 ..     243     279 ..     220     285 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2.4e-05
   Hfx_Cass5  27 qyiyreaaevkWddnlkalts.PvPreWsyldWfqqilk 64 
                 + +y ea++v+W +n+ a  +     eW  l Wf++ +k
  EPX73046.1 243 KNVYPEAMNVQWRSNGTAWVTnSLMEEW--LRWFDEKMK 279
                 469**************97651556777..789987665 PP

>> Arch_fla_DE  Archaeal flagella protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.3       4.4   1.6e+04      17      30 ..     265     278 ..     260     287 .. 0.64
   2 ?   11.5   0.3   5.6e-05       0.2      15      55 ..     335     376 ..     330     389 .. 0.82

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 4.4
  Arch_fla_DE  17 lvvleWlefLverv 30 
                   ++ eWl++  e++
   EPX73046.1 265 SLMEEWLRWFDEKM 278
                  45567777766655 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 5.6e-05
  Arch_fla_DE  15 aelvvleWlefLvervg.venaaealdyYeeigWiseevree 55 
                  ++++ l+W +++ +++  +++ +++++ Y+ ++Wi+e+ + +
   EPX73046.1 335 KTHYRLRWARYMYTEMQsQKDPLKTVNVYKALQWITESWHVD 376
                  566789******98875156789*************987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (516 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       594  (0.0331307); expected 358.6 (0.02)
Passed bias filter:                      493  (0.0274974); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.65u 0.32s 00:00:00.97 Elapsed: 00:00:00.51
# Mc/sec: 3054.68
//
Query:       EPX73047.1  [L=117]
Description: RING finger-like protein Ini1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.6e-49  164.3  11.4    8.7e-49  164.1  11.4    1.0  1  PHF5      PHF5-like protein
  ------ inclusion threshold ------
       0.73    7.6   7.5       0.78    7.5   7.5    1.2  1  PolC_DP2  DNA polymerase II large subunit DP2
        4.6    7.3  18.3    1.1e+02    3.0  18.3    2.6  1  DZR       Double zinc ribbon


Domain annotation for each model (and alignments):
>> PHF5  PHF5-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.1  11.4   1.5e-52   8.7e-49       1     104 []       1     104 [.       1     104 [. 0.99

  Alignments for each domain:
  == domain 1  score: 164.1 bits;  conditional E-value: 1.5e-52
        PHF5   1 msrhqadlvlcrkqpGtaigklcekcdgkcpicdslvkpatkvricdecsfgkleekciicgskgvsdayyclecvrlekdrdGcpriinvgssktdll 99 
                 ms+h++dl+lcr+qpG+++gklce+cd kcpicds+v+p+t vricdec+fg+ +++ciicg+ gvsd+yyc+ec+r+e drdGcpr+in+g+s+td +
  EPX73047.1   1 MSKHHSDLILCRRQPGITVGKLCERCDDKCPICDSHVRPTTLVRICDECAFGSAQDRCIICGAPGVSDCYYCAECTRMEYDRDGCPRVINLGTSRTDWF 99 
                 9************************************************************************************************** PP

        PHF5 100 yekkk 104
                 ye+kk
  EPX73047.1 100 YERKK 104
                 **997 PP

>> PolC_DP2  DNA polymerase II large subunit DP2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   7.5   0.00013      0.78     615     664 ..      40      91 ..      17     112 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.00013
    PolC_DP2 615 eiarrkCkkCgketlearCeeCgek.teeklvCkkceeeve.eekcekceke 664
                     r C++C   + + rC  Cg+  ++  ++C +c++ +  ++ c+++ + 
  EPX73047.1  40 TTLVRICDECAFGSAQDRCIICGAPgVSDCYYCAECTRMEYdRDGCPRVINL 91 
                 556799*****************983567799****9955538889997654 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0  18.3     0.018   1.1e+02      15      49 .]      30      76 ..       7      76 .. 0.75

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.018
         DZR 15 CseCgtklkavaa............edrCpsCgekvdpearfCpeCG 49
                C+ C +++++++             +drC  Cg++  +++ +C eC+
  EPX73047.1 30 CPICDSHVRPTTLvricdecafgsaQDRCIICGAPGVSDCYYCAECT 76
                55555555533335556666666669********************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       680  (0.0379274); expected 358.6 (0.02)
Passed bias filter:                      238  (0.0132746); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.41
# Mc/sec: 856.71
//
Query:       EPX73048.1  [L=1078]
Description: guanyl-nucleotide exchange factor Sec73 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.9e-29  100.6   0.4    1.3e-28   99.9   0.4    1.3  1  Sec7            Sec7 domain
    0.00041   20.7   0.1     0.0019   18.5   0.1    2.3  1  PH_9            Pleckstrin homology domain
     0.0045   17.5   0.2       0.59   10.7   0.2    3.1  1  PH              PH domain
  ------ inclusion threshold ------
      0.022   15.2   0.5      0.078   13.5   0.5    2.0  1  DUF16           Protein of unknown function DUF16
       0.16   12.5   0.7       0.54   10.8   0.0    2.2  2  EF-G-binding_N  Elongation factor G-binding protein, N-termin


Domain annotation for each model (and alignments):
>> Sec7  Sec7 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.9   0.4   3.7e-32   1.3e-28      60     182 ..     403     521 ..     333     522 .. 0.83

  Alignments for each domain:
  == domain 1  score: 99.9 bits;  conditional E-value: 3.7e-32
                 HHHHHHHHHHHCTS--TT--HHHHHHHHCCCS-B-SSHHHHHHHHHHHHHHHHHTTCTCG-SHHHHHHHHHHHHHHHHHHC-TTSCCS--HHHHHHCTT CS
        Sec7  60 efnkevlkefvdlfdfsglrldeAlRlflssfrlpgEaqkierilekFaekyfeqnpevfenadavfvLaysiimLntdlhnpqvkkkmtledFiknnr 158
                 e+ +e l+  +  +dfs  +ld +lRlfl + +lp+E q+i+r++ +F+++y+e n ++f+++d++++L++s+imL+td  n + k+kmt+++Fi+ ++
  EPX73048.1 403 EVLSEALHLCLCGMDFSCRPLDFCLRLFLLKSHLPKETQQIDRVITAFSKRYYECNTDMFSSEDQCYILVFSLIMLHTDVFNVNNKHKMTKQEFINICK 501
                 45556777777789*********************************************************************************9885 PP

                 TTBTTB---HHHHHHHHHHHHHS- CS
        Sec7 159 gindgkdlpeefLeeiYdsIkeee 182
                  i+d   l  e+ e  Yd+I+ ++
  EPX73048.1 502 -IDD---LAPEVFEYYYDNITYTP 521
                 .876...9***********98765 PP

>> PH_9  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.1   5.3e-07    0.0019      57     118 ..     708     793 ..     632     794 .. 0.64

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 5.3e-07
        PH_9  57 s.......................lknakllgkirlhhaLaekasdYkk.kshvFrLqtadgaeylfqtsdakevqeWvdtiNyvA 118
                                         +++  +++  +l  a+a +  +  +  +++F++   dg++  + t++++ + eW+++iNy+A
  EPX73048.1 708 MndfsgtdsspnspdepalvfsppIEQLSPETTHSLVNAFAYCDRECISnPPYMFHILFRDGSVETLTTTTEECMVEWISRINYIA 793
                 0444444445555555666666666666778888899999999888666589*********************************9 PP

>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.2   0.00016      0.59      10     102 ..     646     791 ..     634     794 .. 0.60

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00016
                 ETSSSSCSEEEEEEEEETTEEEEESST.........TCTTESSEEEEEESTTEEEEEEEC....................................... CS
          PH  10 kgsgkkkswkkrwfvLkdsellyyknd.........ksekdkepkgsislsncevvevva....................................... 60 
                 + sg++ s+k++ + L+ s++l+++n+         +    +++ + is ++ ++  + +                                       
  EPX73048.1 646 RVSGHS-SFKEHLILLTASRILFFRNStwardlisqQ----ENYERAISKTKSSSNMTLTsnvttptmndfsgtdsspnspdepalvfsppieqlspet 739
                 344444.999999999999999999999998855552....3333333333333332222222244456666665555555555555555555555444 PP

                 ............TT.SSSSTSEEEEEESTSSSTEEEEEEESSHHHHHHHHHHHHH CS
          PH  61 ............te.dpkrkfcfelriverngsrtyllqasseeerkeWikaiqs 102
                              e  ++ +++f + +   +g ++ +l++++ee + eWi+ i+ 
  EPX73048.1 740 thslvnafaycdREcISNPPYMFHILFR--DG-SVETLTTTTEECMVEWISRINY 791
                 5555555555554445666666666777..77.9999999999999999999986 PP

>> DUF16  Protein of unknown function DUF16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.5   2.2e-05     0.078      12      98 ..     801     896 ..     792     917 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 2.2e-05
                 X.X.XTTB-BHHHHHHB-..BHHHHHHHHHHHH............HHHHHHHHHHHHHHHHHHHHHHHHHHHHH.......HHHHHHHHHHHHHHH CS
       DUF16  12 kiPvkteYVTrkqlnefkdsnkqrLkkieakvd.........klgeqinkleqkvekqgekikelkveqkaqgeelnkvdetleliletLqkinkR 98 
                 ++P ++ Y  r+++  + ++ +q+L  ie +++         + + + ++l+ + +++  k+  l+ + k  +     + +t  +il++ +k++  
  EPX73048.1 801 RMPFSDSYLPRRDFSCYPKDMEQELAAIEVQLKqdlevarkrTIKTRTDQLKGEYDQLSTKLLVLQRNAKNLSICAPMQPKTRAVILQAYKKLETQ 896
                 48*******************************888888777666777777777788888887777777776665567888888888877776655 PP

>> EF-G-binding_N  Elongation factor G-binding protein, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00015      0.54      44      79 ..     353     388 ..     342     389 .. 0.93
   2 ?   -2.1   0.2       1.6   5.7e+03      17      68 ..     862     913 ..     856     921 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00015
  EF-G-binding_N  44 lfpelseeqkelLeqiddiktkekaeklLeeLkeyV 79 
                     lf++l+++ +++L+++ + +++ +a+++L++L+  V
      EPX73048.1 353 LFSDLKPNPNKFLSSVPSLEDSDTAQSYLSKLRATV 388
                     79******************************9887 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.6
  EF-G-binding_N  17 llnayrsvnDkkvveavkalaaekIlelfpelseeqkelLeqiddiktkeka 68 
                     ll   r+++  ++ + ++  + + Il++ ++l+++ ++l  + ++++t+ ++
      EPX73048.1 862 LLVLQRNAKNLSICAPMQPKTRAVILQAYKKLETQIQSLYLDMQKVRTQLRI 913
                     5555566666677777788888888898888877777776688888877666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1078 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1345  (0.0750181); expected 358.6 (0.02)
Passed bias filter:                      557  (0.031067); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.87u 0.29s 00:00:01.15 Elapsed: 00:00:00.49
# Mc/sec: 6590.16
//
Query:       EPX73049.1  [L=1206]
Description: pleckstrin y domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-25   90.6   0.0    3.8e-25   89.1   0.0    1.9  1  VASt      VAD1 Analog of StAR-related lipid transfer domain
    2.4e-14   53.6   0.6    4.2e-14   52.8   0.6    1.4  1  BAR_3     BAR domain of APPL family
    9.1e-08   32.6   1.8    2.2e-07   31.3   0.2    2.6  2  PH        PH domain
  ------ inclusion threshold ------
       0.01   14.9   0.1      0.022   13.8   0.1    1.5  1  DUF1908   Domain of unknown function (DUF1908)
      0.026   14.6   0.4       0.14   12.3   0.0    2.4  2  HBD       Helical bundle domain


Domain annotation for each model (and alignments):
>> VASt  VAD1 Analog of StAR-related lipid transfer domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.1   0.0   1.1e-28   3.8e-25       2     152 ..     772     918 ..     771     919 .. 0.90

  Alignments for each domain:
  == domain 1  score: 89.1 bits;  conditional E-value: 1.1e-28
                 EEEEEESS-HHHHHHHHHSS-THHHHHHHHH.TT-BS-H.HHSE.........EEEEEEEE--SSSS.-SEEEEEEEEE..EEEEET.TEEEEEEEEE- CS
        VASt   2 lveevlpisvkalfellfgdkseflkkfleerqkttdisvgpweeakekgkltRklsytkplkgsig.pkqtkvtetqtilveeddl.yyivvvtttkt 98 
                 ++++v+++s+kalf+++fgdks+fl ++++ + +  di++ pw +++++gk  R ++y++++ +s g  ++ + +++q+ ++ ++   y   +++  + 
  EPX73049.1 772 ILDNVYDVSSKALFHIVFGDKSNFLLRLYKLH-GIEDIELLPWIQDENTGKIYRYINYKLHYRDSKGvFHSQHYQDRQSQDKRNEYNlY---ILSWYHH 866
                 899****************************8.********************************997899999999996655555546...******* PP

                 T.TSTTTTSEEEEEEEEEEEETTTE..E.EEEEEEEEEESS--T.THHHHHHHHH CS
        VASt  99 pldvPygdsFsvetryvitwgsknskstcrltvstkvefskssw.lkgiIekgal 152
                 p+ +Py++sF+++ r+ i++  kn+   +rl  s+++e++k+ + + ++ e  a+
  EPX73049.1 867 PWAIPYKESFRLVIRTSISHLRKNK---SRLLLSIGIEWIKKPFgVSKVLEAVAR 918
                 ********************77666...7************88889998887765 PP

>> BAR_3  BAR domain of APPL family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.8   0.6   1.2e-17   4.2e-14       3     193 ..      18     210 ..      16     244 .. 0.92

  Alignments for each domain:
  == domain 1  score: 52.8 bits;  conditional E-value: 1.2e-17
       BAR_3   3 feeclkDSPkfResleevEaeleelekklkkllKlckrlieagkay..saaqkqfaqsLrelkkeskgdeetdesLkkfsellqelenehtilldqaqr 99 
                 ++ec  DSP fR+s++   + l   +++ ++ l++c ++++a +a+  + a+ +f +  + ++  + + ++ +++L + +e+++ +   +++ ++++ +
  EPX73049.1  18 LNECSIDSPSFRASIHFLGNQLRAYSQWSEEFLRSCLKYTQAIEAIepVVATISFQSMPSVISCGFFDPDYATTALLNGQEIFRSTFLIQMEQARNIRK 116
                 79****************************************997733678888888888899999********************************* PP

       BAR_3 100 sikkpLekFrkedlkevkekkkkFdkesekleaaleknaqlskkkkeseleeadnelkatrkkfhqasldyvlqinelqerkkfeiletllsfm 193
                  +++p+e F   +l+ + +  + +  e+e ++a + ++a+ s+ k   ++++ ++ l ++r+ +  ++l+yv q+ ++++      le++ +f 
  EPX73049.1 117 YVVNPMELFHDSKLRPLLQLDERYRTEREHYDAEMLRYASSSQMKDLAQMRDEAKSLCDARSTYFTTALQYVVQLGSFHSSLDSIALESVGRFS 210
                 ******************************************************************************9999999999888875 PP

>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.3   0.2   6.2e-11   2.2e-07       3     103 ..     291     387 ..     289     389 .. 0.83
   2 ?   -1.7   0.1       1.2   4.2e+03      18      56 ..    1117    1153 ..    1103    1188 .. 0.59

  Alignments for each domain:
  == domain 1  score: 31.3 bits;  conditional E-value: 6.2e-11
                 EEEEEEEETSSSSC....SEEEEEEEEETTEEEEESSTTCTTESSEEEEEESTTEEEEEEECTTSSSSTSEEEEEESTSSSTEEEEEEESSHHHHHHHH CS
          PH   3 keGwLlkkgsgkkk....swkkrwfvLkdsellyykndksekdkepkgsislsncevvevvatedpkrkfcfelriverngsrtyllqasseeerkeWi 97 
                  +GwLl+  s +k      wkk wf+++++ + y  +d  +      + i +  c+ +      ++ r+fcf+++++    s+ ++lqa+++ ++ +W 
  EPX73049.1 291 LQGWLLRNVSSNKPenkaVWKKFWFFIDNGYFGYLTDD-ANGGVFESERIGVLLCKFSPL---VNGHRRFCFQIKTK----SSLFILQAETQLDMIKWE 381
                 68****999999889999********************.444444455556666666654...4**********999....79***************9 PP

                 HHHHHH CS
          PH  98 kaiqsa 103
                 k +++a
  EPX73049.1 382 KVFHNA 387
                 988775 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.2
                  EEEEEEEEETTEEEEESSTTCTTESSEEEEEESTTEEEE CS
          PH   18 wkkrwfvLkdsellyykndksekdkepkgsislsncevv 56  
                   k++++++k  +l y+++    ++    + +  + ++++
  EPX73049.1 1117 EKRKYVMMKLASLNYFDYL--VHQDAIYEHVQHELLTCQ 1153
                  5778888888888888887..344444444444444444 PP

>> DUF1908  Domain of unknown function (DUF1908)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.1   6.2e-06     0.022      86     151 ..     706     775 ..     646     788 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 6.2e-06
     DUF1908  86 nesvpseeeagrrspilrprsrsLsspsrspi..vDneivlmntlykerfpkatqq..meerlkefinen 151
                 + ++p+ + ++r ++++r rs+ Ls ps +     D+ i  m  l   r+pk t q  + +++ ++i +n
  EPX73049.1 706 QSAIPDFDAISRPQTHVRGRSKTLSTPSETVYkeDDHVIEQMRRLNIARLPKETVQvaRSDHMDDIILDN 775
                 4567888889********************99745566779*************9933345666666665 PP

>> HBD  Helical bundle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   3.8e-05      0.14       8      83 ..     185     274 ..     179     275 .. 0.83
   2 ?   -1.9   0.1       1.1   3.9e+03      35      55 ..    1131    1151 ..    1125    1167 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 3.8e-05
                 HHHHHHHHTSSSSS-S..HHHH.HHHH.HHHHHHHHHT-SS--HHHHHHHHHHHHHHHTT---..........HHHHHHHHHHSHHHHHH CS
         HBD   8 eeYleeLekvkqkddk..lkst.Rlsv.vkrlaeYLneqtelteevkekiatYvkklremqPa..........efEeeyLeklspkslve 83 
                  +Y+ +L + + + d+  l+s+ R sv   rl + L+e    +++   ++ +Y +kl+e+qPa           +E+e L++++p+s +e
  EPX73049.1 185 LQYVVQLGSFHSSLDSiaLESVgRFSVeTFRLSSQLHESNASAHDQIVRLLSYGSKLNESQPAlktlitnvynRMEREILKRIQPPSNLE 274
                 68***********99966777669**94569*******************************7444444333367999999999999887 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.1
                  HHHHHHT-SS--HHHHHHHHH CS
         HBD   35 laeYLneqtelteevkekiat 55  
                   + YL  q  + e v++++ t
  EPX73049.1 1131 YFDYLVHQDAIYEHVQHELLT 1151
                  6789*****999999999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1206 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       589  (0.0328518); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.79u 0.27s 00:00:01.06 Elapsed: 00:00:00.46
# Mc/sec: 7893.15
//
Query:       EPX73050.1  [L=578]
Description: myotubularin family phosphatidylinositol-3-phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   9.6e-147  488.5   1.2   1.2e-146  488.2   1.2    1.1  1  Myotub-related  Myotubularin-like phosphatase domain
    0.00042   20.0   0.0     0.0008   19.0   0.0    1.4  1  Y_phosphatase   Protein-tyrosine phosphatase
     0.0007   19.4   0.1     0.0016   18.2   0.1    1.6  1  DSPc            Dual specificity phosphatase, catalytic domai
  ------ inclusion threshold ------
      0.014   15.3   0.0      0.027   14.4   0.0    1.5  1  Y_phosphatase3  Tyrosine phosphatase family


Domain annotation for each model (and alignments):
>> Myotub-related  Myotubularin-like phosphatase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  488.2   1.2  2.7e-150  1.2e-146       1     352 []     103     495 ..     103     495 .. 0.96

  Alignments for each domain:
  == domain 1  score: 488.2 bits;  conditional E-value: 2.7e-150
                     XXXXXXXXXXXXXX.X-GGGSS-TTHHHHHTT-........SSSSEEEE-TTTTSSS-TTS-SSEEEETT--HHHHHHHHTTBGGG---EEEEE- CS
  Myotub-related   1 lyafsykeeekele.engwkiydaekefkrlgvs...eekksssewrisevNedyklcetYpsllvvPksisdevlkkaakfrskgRiPvlsylh 91 
                     lya++y ++ +e + ++gw+++  e+e++r+gv    + + + ++wr++++Ne+y  c++Yp++l+vP+++sd+v+++  k+rsk+R+P+l+ylh
      EPX73050.1 103 LYAYHYMPTGEEGKvKSGWDLFLLENEYRRMGVGnsnSAEGAGTNWRLTKINENYLECQSYPQILAVPTNVSDSVIHYGCKYRSKNRFPTLTYLH 197
                     6999**9955444459*****************987756677899************************************************** PP

                     TTT--EEEEE--BS-TT.T---HHHHHHHHHHHTTT.TS..S-EEEEE-S-HHHHHHHHCTT-----CCCSTTEEEEE-----HHHHHHHHHHHH CS
  Myotub-related  92 kengavitrssqplvglkqkrskeDeklleaifksskssaekkllivDarpkanavankakgggteneenYknaklvflgienihvmreslkklv 186
                     k n+ +itr+sqplvgl+q+rs++Dek++eaif++s     k++livDarp +na+an a+g+g+en+++Y+ ak+++lgi+nihvmresl+k+v
      EPX73050.1 198 K-NSFSITRASQPLVGLRQNRSAQDEKIVEAIFATS-IIPGKENLIVDARPSTNAMANIAVGAGSENMDHYRFAKKIYLGIDNIHVMRESLSKIV 290
                     5.9*******************************97.6668****************************************************** PP

                     HHH...TSS--HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCS---EEEE-SSSSSHHHHHHHHHHHHH-GGGGSHHHHHHHHHHHTTTTT-- CS
  Myotub-related 187 ealkdsekeasekkwlsaLekskWlkhiksiLeaaaliaksvelekssvLvhcsdGwDrtsqlsslaqllLdpyyRTieGFqvLiekeWlsfGhk 281
                     +al+++ + +  +  +++L+ks+Wlkh+++iL++a+li+++v+ ++++vLvhcsdGwDrtsql++l ql+Ldp+yRTieGF++Liek+Wl+fGh+
      EPX73050.1 291 NALRNT-DISAASPSVEQLNKSNWLKHLTNILQGAVLIIQTVHFQHAHVLVHCSDGWDRTSQLCALPQLCLDPHYRTIEGFMMLIEKDWLAFGHR 384
                     ***999.456788999******************************************************************************* PP

                     HHHHTTSS-...T........................................TSTT---HHHHHHHHHHHHHHH-TTT-SB-HHHHHHHHHHHH CS
  Myotub-related 282 FaeRsghlaseka........................................kskersPvFlqFldcvyqllrqfptaFeFnerfLirlldhly 336
                     FaeR+ hl  +++                                        ++k +sPvF+qFldcv+q++rqfp+ FeFnerfL+rll+hly
      EPX73050.1 385 FAERCCHLPGKRIfstdnsspeeqqtsssvasstlqytfctfrsalsgfavdhSEKMSSPVFHQFLDCVWQIMRQFPKYFEFNERFLRRLLYHLY 479
                     *********88888*************************************988888************************************** PP

                     H--SSTT-SSSHHHHH CS
  Myotub-related 337 scqfgtFlynsekerk 352
                     scq+g+Flyns++erk
      EPX73050.1 480 SCQYGSFLYNSQRERK 495
                     **************96 PP

>> Y_phosphatase  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.0   1.8e-07    0.0008     125     193 ..     295     358 ..     260     369 .. 0.79

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 1.8e-07
                    ETTTTEEEEEEEEEEESSS-SSSSGSCCHHHHHHHHHHHHHHSTTSS-EEEECSSSSHHHHHHHHHHHH CS
  Y_phosphatase 125 kkkeeseerevkqlqytnWpdhgvpesaksllklirkvekskeaksgpvvVhCsaGvgRtgtfvaldil 193
                    +++ ++++ +v+ql   nW +h   +  ++++ +i+ v+ ++    + v+VhCs+G  Rt+ ++al  l
     EPX73050.1 295 NTDISAASPSVEQLNKSNWLKHL-TNILQGAVLIIQTVHFQH----AHVLVHCSDGWDRTSQLCALPQL 358
                    3444445668999999***9998.446788888888888888....9*****************99765 PP

>> DSPc  Dual specificity phosphatase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.1   3.6e-07    0.0016      47      92 ..     305     354 ..     264     355 .. 0.75

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 3.6e-07
                 CES....STTSCCGGGHHHHHHHHHHHHHTT-EEEEEESSSSSHHHHHHH CS
        DSPc  47 ved....ehetkiskyleeavefidkakqkgkkvlVHCqaGisRSatlii 92 
                 ve+    ++ + +++ l+ av +i++++ ++  vlVHC  G  R+  l++
  EPX73050.1 305 VEQlnksNWLKHLTNILQGAVLIIQTVHFQHAHVLVHCSDGWDRTSQLCA 354
                 44444457777888899999*************************99985 PP

>> Y_phosphatase3  Tyrosine phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   6.1e-06     0.027     114     152 ..     328     367 ..     237     369 .. 0.73

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 6.1e-06
  Y_phosphatase3 114 fealadee.pvlfHCtaGKDRTGvlaalllsllGvdeedi 152
                     ++++  ++  vl+HC+ G DRT  l+al +  l+ +  +i
      EPX73050.1 328 IQTVHFQHaHVLVHCSDGWDRTSQLCALPQLCLDPHYRTI 367
                     33333333689*****************999998877776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (578 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       552  (0.0307881); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 4422.67
//
Query:       EPX73051.1  [L=540]
Description: C-22 sterol desaturase Erg5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-54  186.0   0.0    1.3e-54  185.7   0.0    1.1  1  p450      Cytochrome P450


Domain annotation for each model (and alignments):
>> p450  Cytochrome P450
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  185.7   0.0   7.3e-59   1.3e-54       1     424 [.      53     472 ..      52     503 .. 0.80

  Alignments for each domain:
  == domain 1  score: 185.7 bits;  conditional E-value: 7.3e-59
                 --SESEHHCCHCHHHHTTTCCHHHHHHHHHHHH..-SEEEEEETTEEEEEEESHHHHHHHHCTSTTTTCEESSHHHHHHHHHTTTTSSSTTCGHHHHHH CS
        p450   1 Ppgptplplvgnllqlgrkeelhevlrklqkky..gpifrlklgskpvvvlsgpeavkevlikkgeefsgrpdeallatsrkpfkgkgvlfangekwkk 97 
                 P++   +p++g++l        +  ++k++ k   gp+  + + +k vv+ s+ ++++++l+  + +++    +a      k  k+++ +f +g ++ +
  EPX73051.1  53 PGPLIKIPFMGSFLDSM-----KPTFEKYKTKWdsGPLSCVSVFHKFVVIASERDLARKILNSPS-YVQPCVVDAGK----KILKHTNWVFLDGRDHVE 141
                 44444899999999865.....3334556666555*****************************5.66665555555....5699************** PP

                 HHHHHHHHHTSHSTT.THHHHHHHHHHHHHHHHHCCCCHCSEEETHHHHHHHHHHHHHHHHHSSHHHTTTSSHHHHHHHHHHHHHHHHHCHHHHCCCCC CS
        p450  98 lRrfltptltsfgkl.sleelveeeaedlveklrkkagesselditellskaaldvigsilFgarfdlledeklselvkaveelssllskssvqllllf 195
                  R+ l+  +t+  +l  + +  ee+ ++  +++ ++++ +   +    + ++ + ++++++ g+ ++   d+  + + +  +++   +  + v++ l+ 
  EPX73051.1 142 YRKGLNGLFTTR-ALgVYLPAQEEVYNKYFKEFLDHSQGK-YTEFMIPFRDINVATSCRTFCGHYIS---DDAIKHIAEEYWNITAAM--ELVNFPLVL 233
                 ************.9999*******9999988888888777.7999*******************755...665555555555554444..344444444 PP

                 HHHTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCHCHC.......SCSSCSHHHHHHHHC......TTCTCT....SSSSHHHHHHHHHHHHHHHHHH CS
        p450 196 pllkylptkllrklkeavkklkdlldklieerretldsa.......kksrrdfldalllak......kekkge....sklsdeelaatvlellfaGvdT 277
                 p     +tk +  ++  +k++ ++ +k     r++++         +++ r ++     +       +ek  +      +sdee+  t l +lfa++d 
  EPX73051.1 234 P-----FTKVWYGIR-SRKIVMQYFMKAADASRKSMEAGnaptcmmEEWIREMIETRKYNNskgldgSEK--PsvliRDFSDEEISLTFLSFLFASQDA 324
                 4.....334444444.345566666666666666666554443444445555544433222556533233..256899********************* PP

                 HHHHHHHHHHHHHHSHHHHHHHHHHHHHHC.CTTT.T-HHHHCCT-HHHHHHHHHHHHHSCSSTTEEEEESSSCEEETT.EEE-TT-EEEEEHHHHHT- CS
        p450 278 tsstlswaLyeLaknPevqeklreEidevl.gdkr.eptyddlqklpyldavikEtLRlhpvvplllpRevtkdvvirg.ylipkGtevivnlyalhrd 373
                 tss+++w + +La++Pe+ +k+reE  ++  gd   +++ + l+k++y+++v+ E LRl+p+v   +p +v+k   i+  y++pk+++vi+ ly+ ++d
  EPX73051.1 325 TSSAMTWLFQYLADYPEILQKVREEQFRIRdGDPNvPISLELLEKMTYTRMVVTECLRLRPPVL-MVPYRVKKSFPISPeYTVPKDSMVIPTLYGALHD 422
                 ******************************8777689***************************.888999998888777******************* PP

                 TTTSSSTTS--GGGGB-TTSCTESSCTT--TTEEGGGS-TTHHHHHHHHHH CS
        p450 374 pevfpnPeeFdpeRFldekgnskrksfaflPFGaGpRnCiGerlArmelkl 424
                 p+v+p+Pe+F+peR++++    ++++  ++ FG+Gp+ C+G+r A  +l  
  EPX73051.1 423 PKVYPDPESFKPERWEPNGL-AQQNPKNWMVFGNGPHVCLGQRYAVNHLIA 472
                 ******************76.77********************99877755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (540 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       530  (0.029561); expected 358.6 (0.02)
Passed bias filter:                      500  (0.0278878); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.31s 00:00:00.86 Elapsed: 00:00:00.44
# Mc/sec: 3657.58
//
Query:       EPX73052.1  [L=571]
Description: sorting receptor for ubiquitinated membrane protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.5e-38  129.6   0.1    1.6e-37  128.5   0.1    1.5  1  VHS       VHS domain
      1e-09   37.6  10.8    3.5e-05   23.4   0.5    2.7  2  UIM       Ubiquitin interaction motif
  ------ inclusion threshold ------
      0.016   15.3   0.0      0.039   14.0   0.0    1.7  1  ENTH      ENTH domain


Domain annotation for each model (and alignments):
>> VHS  VHS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.5   0.1   2.7e-41   1.6e-37       4     139 ..       8     145 ..       6     147 .. 0.94

  Alignments for each domain:
  == domain 1  score: 128.5 bits;  conditional E-value: 2.7e-41
                 HHHHHHHHHHHT-TT-SS-..-HHHHHHHHHHHHCSTCHHHHHHHHHHHHHT-SSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHHCTTT CS
         VHS   4 asslekliekATdeslree..dlslileicDlinekeagpkeavrlikkkinsknphvallaLklldalvkNcGskfhleiaskeflnelvklilekkn 100
                 +s++   +ekAT+e+l+ +  +++l+l+i+D i++k+ ++k a+r++k +i+++np+v+llaLkl d++ kN+Gs+f +eias+ef+++lv+ il++++
  EPX73052.1   8 NSEFAVEVEKATSETLPTGaeEIALNLDISDKIRSKSIDAKSAMRILKSRIDHSNPNVQLLALKLCDTCLKNGGSSFVNEIASREFMDNLVS-ILRSPS 105
                 5667789********997666***********************************************************************.999999 PP

                 CHCS.HHHHHHHHHHHHHHHT.TT-TTGHHHHHHHHHHHH CS
         VHS 101 sklakvkkkvlelleeWadaf.knkpelkkisdvykllkr 139
                 + +++v++++l ++++Wa a+ +++ ++++i dvy++l++
  EPX73052.1 106 GVDEEVERAILYYIQSWALAVpEKNYSMRYIVDVYERLQE 145
                 9999*****************98899***********986 PP

>> UIM  Ubiquitin interaction motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.5   5.8e-09   3.5e-05       2      17 .]     215     230 ..     214     230 .. 0.94
   2 !   17.6   4.3   4.3e-07    0.0025       1      17 []     257     273 ..     257     273 .. 0.96

  Alignments for each domain:
  == domain 1  score: 23.4 bits;  conditional E-value: 5.8e-09
         UIM   2 EdedLqrAlalSlqEa 17 
                 EdedL+rA++lSl+E+
  EPX73052.1 215 EDEDLKRAIQLSLKES 230
                 9*************96 PP

  == domain 2  score: 17.6 bits;  conditional E-value: 4.3e-07
         UIM   1 dEdedLqrAlalSlqEa 17 
                 dEde+L++A++ SlqEa
  EPX73052.1 257 DEDEELKQAIEISLQEA 273
                 8***************6 PP

>> ENTH  ENTH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   6.6e-06     0.039       2      84 ..       9      91 ..       8     112 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 6.6e-06
                -HHHHHHHHHTSSS.SSS--HHHHH.HHHHHTTSH.HHHHHHHHHHHHHHHH--GGGHHHHHHHHHHHHHHHHHS-HHHHHHHHHT CS
        ENTH  2 seteskvreatnnd.pwGpsnkllt.eiarltysk.kelseiisvitkrLqnnkgkewrsvlKaLtlieYLlknGseqvidwlken 84
                se+ ++v++at++  p+G+++  l+ +i++   sk  + +  + +++ r+   ++++ ++ l aL+l++ +lknG +++++++ ++
  EPX73052.1  9 SEFAVEVEKATSETlPTGAEEIALNlDISDKIRSKsIDAKSAMRILKSRI---DHSNPNVQLLALKLCDTCLKNGGSSFVNEIASR 91
                78999*******99899**99999768999988887899***********...8888899999*****************999654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (571 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       803  (0.0447878); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 3975.52
//
Query:       EPX73053.1  [L=377]
Description: short chain dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.3e-13   48.4   0.0    8.2e-12   45.0   0.0    2.1  2  adh_short        short chain dehydrogenase
      5e-06   26.2   0.0    9.1e-06   25.4   0.0    1.4  1  adh_short_C2     Enoyl-(Acyl carrier protein) reductase
    0.00024   21.1   0.0     0.0004   20.3   0.0    1.3  1  KR               KR domain
     0.0092   15.4   0.0       0.43    9.9   0.0    2.1  2  GDP_Man_Dehyd    GDP-mannose 4,6 dehydratase
  ------ inclusion threshold ------
      0.023   14.2   0.0       0.06   12.8   0.0    1.8  1  Epimerase        NAD dependent epimerase/dehydratase family
      0.026   13.7   0.0      0.044   12.9   0.0    1.3  1  Polysacc_synt_2  Polysaccharide biosynthesis protein


Domain annotation for each model (and alignments):
>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.0   0.0   2.8e-15   8.2e-12       2     127 ..      56     188 ..      55     203 .. 0.81
   2 ?    0.9   0.0     0.089   2.7e+02     169     186 ..     257     274 ..     232     279 .. 0.78

  Alignments for each domain:
  == domain 1  score: 45.0 bits;  conditional E-value: 2.8e-15
                 EEEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHH..HHHHHHHHHHT.TSEEEEE.E-TTTSHHHHHHHHHHHHHHH..SSESEEEE---S.S--SSG CS
   adh_short   2 vvlvtGassGIGraiakelakeGakvvvvdrseek..leevakelkee.gakalai.qvDvtdreevealvekavkkl..gkldvLvnNAGi.tgsgpf 93 
                 vv+vtG++sGIG+ ++++la  Ga+vv++ rse +      +  l+e  ++++++   +D++++ +v+++  k ++     +ld+++ + G+   +   
  EPX73053.1  56 VVIVTGGTSGIGKRVVEKLALLGAHVVILLRSEPDqfTVDFIMDLRERsNNQFIYSeVCDLSSMLSVRKFATKWIDASpiRRLDMIILCSGLsLPPYVD 154
                 89**************************8888765123456788888876665555269**********99999888777************5555666 PP

                 GGCSHHHHHHHHHHHTHHHHHHHHHHHHHHHHCT CS
   adh_short  94 selseeewervievNltgvflltravlpamlkqs 127
                  ++++e +e   ++N+ g+++l+r + p +  q 
  EPX73053.1 155 RQVTAEGVELQWATNFLGPYQLMRIMRPVLYGQP 188
                 6777777*****************9999887443 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.089
                 GGTEEEEEEEESSBSSHH CS
   adh_short 169 ptgirvnavaPGlvdTdm 186
                 p +i  ++v+PG+v+T+ 
  EPX73053.1 257 PCNIHTVMVNPGVVRTPG 274
                 446999*********986 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.0     3e-09   9.1e-06       3     120 ..      63     187 ..      59     207 .. 0.83

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 3e-09
                   TTSHHHHHHHHHHHTT-EEEEEESSGGH...HHHHHHHHHHTTSEE...EE--TTSHHHHHHHHHHHHHHH..SSEEEEEE-----EGCSS-GGG.. CS
  adh_short_C2   3 asgIGraiAkalaeeGaevvltdlneea...kkrveelaeelgaev...lecDVtdeeqvealveevvekf..gklDilvnnagiapklkgpfle.. 89 
                    sgIG+ ++++la  Ga+vv+  ++e +    + + +l e+ ++++     cD ++  +v++++ +  +     +lD+++ + g + +   p+++  
    EPX73053.1  63 TSGIGKRVVEKLALLGAHVVILLRSEPDqftVDFIMDLRERSNNQFiysEVCDLSSMLSVRKFATKWIDASpiRRLDMIILCSGLSLP---PYVDrq 156
                   59***********************99933335556677777777447889***************9998878***************...777644 PP

                   H-HHHHHHHHHHHTHHHHHHHHHHHHHCTSC CS
  adh_short_C2  90 tsreefdraldvnlyslfllakaalplmkeg 120
                   ++ e+++   ++n+ + ++l++ ++p++  +
    EPX73053.1 157 VTAEGVELQWATNFLGPYQLMRIMRPVLYGQ 187
                   79************************66443 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   1.3e-07    0.0004       3      86 ..      57     142 ..      55     180 .. 0.79

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 1.3e-07
                 EEEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHTT-..EEEE----TT-HHHHHHHHHHHHHHS..S---EEE CS
          KR   3 ylitGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaelealga..evevvaaDvsdkdavealleeikaee..ppikGvi 86 
                 +++tGG+ g+G+ +++ la  ga+ ++ll Rs ++d+   ++i  l+++     +    +D+s+  +v++  ++  +    +++  +i
  EPX73053.1  57 VIVTGGTSGIGKRVVEKLALLGAHVVILL-RS-EPDQFTVDFIMDLRERSNnqFIYSEVCDLSSMLSVRKFATKWIDASpiRRLDMII 142
                 79********************9776666.66.57888888*****99844224667789***9999999887765444355555555 PP

>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.0   0.00015      0.43       1      69 [.      58     121 ..      58     131 .. 0.83
   2 ?    3.4   0.0     0.014        43      95     160 ..     162     236 ..     151     255 .. 0.70

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00015
                    EEETTTSHHHHHHHHHHHHCT-CCEEEEEEE.SS-TTHHHHHCTTT...TTGCCEEEEE--TT-HHHHHH CS
  GDP_Man_Dehyd   1 LiTGiaGfiGsylaelLlekgyevhgivrrs.ssfntgriehlakdpkeeleenlklhkgDltDsssler 69 
                    ++TG++  iG  ++e+L   g +v+++ r + ++f+++ i  l++      ++n ++++ +++D ss+ +
     EPX73053.1  58 IVTGGTSGIGKRVVEKLALLGAHVVILLRSEpDQFTVDFIMDLRE------RSNNQFIYSEVCDLSSMLS 121
                    59***********************99996636677777777764......45779********888755 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.014
                    HHHHHHHHTHHHHHHHHHHHHC.....T..TTSEEEEE.EEGGGG-S-S.SSSB-TTS-----SHH...HHHHHHH CS
  GDP_Man_Dehyd  95 PeytaevnvlGtlrLLeairal.....glekkvrfyqa.StsEvYGkvq.evpqtEttpfyPrsPY...aaaKlya 160
                     e  + +n+lG ++L+ ++r +     g +++vr++ a ++s v G+ + +    +++p+   sP    + aKl+ 
     EPX73053.1 162 VELQWATNFLGPYQLMRIMRPVlygqpG-HRDVRIIAAtCSSYVLGDIKfDDLALDNHPYPRSSPWkvvGNAKLAL 236
                    5667899*************88554433.36788776538999*****9444556777776677762223456655 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0     2e-05      0.06       1      56 [.      57     122 ..      57     267 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2e-05
                 EEEETTTSHHHHHHHHHHHHCTSE.EEEEES-STTTTCHHCHHC......EEEE--TT-HH...HH CS
   Epimerase   1 ilVtGatGfiGsalvkallekgye.vigldrlssasntarledl......elveldltdrs...al 56 
                 ++VtG+t  iG+ +v++l+  g + vi l ++++++    + dl      ++++ +++d s   ++
  EPX73053.1  57 VIVTGGTSGIGKRVVEKLALLGAHvVILLRSEPDQFTVDFIMDLrersnnQFIYSEVCDLSsmlSV 122
                 68********************55499999998888888777778889998887777777733333 PP

>> Polysacc_synt_2  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   1.5e-05     0.044       1      70 [.      57     123 ..      57     132 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.5e-05
                      EEEETTTSHHHHHHHHHHHHHB-SEEEEEES-HHHHHHHHHH........-TTEEEE....E--TT-HHHHH CS
  Polysacc_synt_2   1 vlvtGagGsiGselvrqilkkkpkkiillerdElklyeieke..leeelkkkklkveivpvigdvrdkerle 70 
                      v+vtG++  iG+++v++++   ++ + +l r+E  +++++    l+e+ ++     +i++ ++d+    +++
       EPX73053.1  57 VIVTGGTSGIGKRVVEKLALLGAHVV-ILLRSEPDQFTVDFImdLRERSNN----QFIYSEVCDLSSMLSVR 123
                      79***************999887655.556889999988865224333333....34455566666555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (377 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       657  (0.0366445); expected 358.6 (0.02)
Passed bias filter:                      523  (0.0291706); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.44
# Mc/sec: 2548.73
//
Query:       EPX73054.1  [L=288]
Description: U3 snoRNP-associated protein Imp4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.5e-29  102.3   0.0    4.9e-29  101.8   0.0    1.2  1  Brix      Brix domain
  ------ inclusion threshold ------
        0.2   12.1   3.1       0.18   12.2   1.9    1.6  2  ESM4      Enhancer of split M4 family


Domain annotation for each model (and alignments):
>> Brix  Brix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.8   0.0   5.5e-33   4.9e-29       1     192 [.      90     257 ..      90     258 .. 0.87

  Alignments for each domain:
  == domain 1  score: 101.8 bits;  conditional E-value: 5.5e-33
                 BTT--HHHHHHHHHHHHHCTTSEEEEEE.ECT-TTTHHHHHHH...-HHHHHHHH..HCTCSEEEEEE..SSTTEEEEEEEEECECTGGGSTTTSTS-T CS
        Brix   1 grktssrlrqllkdlrslmkphtasflk.rnsnklkdlvelag...vthlellse..kndcslfvfelskkrPngptlefkvenyslmkdlkkakktef 93 
                 +r++ssrl q++k++r l+++   sf+  r++  + +lve a+   +t+++ll+e    ++s+++++l    P gpt++f+++n++l++d++++ +t++
  EPX73054.1  90 SRDPSSRLAQFAKEMRLLIPN---SFRLnRGNIVVGSLVEAARandITDIVLLHEhrGIPDSMVISHL----PYGPTVSFSLHNVVLRHDIPNT-GTMS 180
                 6899***************66...5555488878889999999999*********876677*******....**********************.**** PP

                 T---EEEEES.HHH.....HHHHHHHHHHH..SEEEG..-B-GG-SEEEEEEES.CCTTTECEEEEE..EEEEEE..STTTTECT..T..EEEEEEESE CS
        Brix  94 gsrPllvfngkenf.....kllksllqdlFrvpkislkspklsglrrvvlftaaenqetdktisfRh..YaiklkksgkklpnlekekkerveLeEiGP 185
                 +++P+l+++   n+     +++k++l  lF  p+  +   k ++  rvv+f    n++ d +isfRh  Ya +        p       ++v L+E GP
  EPX73054.1 181 EAYPHLILE---NLtsklgERVKKVLSALF--PPD-P---K-ESSPRVVTFA---NSD-D-YISFRHhlYAKT-------GP-------KQVILSEAGP 250
                 *********...7777779***********..754.4...3.4889******...666.7.9****9566663.......35.......59******** PP

                 EEEEEEE CS
        Brix 186 rfdLklr 192
                 rf+++l+
  EPX73054.1 251 RFEMRLY 257
                 *****97 PP

>> ESM4  Enhancer of split M4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   1.9     2e-05      0.18      41      85 ..      21      65 ..       4     104 .. 0.75
   2 ?   -2.6   0.0      0.71   6.3e+03      23      38 ..     192     207 ..     185     208 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2e-05
        ESM4 41 lkkggkgrkteltlahpnnvdlentqqqqqqqqeeldednssnae 85
                ++ + ++++  l +a +nn+dl++  q+ +q q+++++d+s+ a+
  EPX73054.1 21 QEAKLNEKRRALRHALENNKDLNKDLQEDTQLQKDYQYDESKAAQ 65
                33344444447999**********777778888899999988743 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.71
        ESM4  23 ekkavrrlkkvlkpLr 38 
                 ++k   r+kkvl  L+
  EPX73054.1 192 TSKLGERVKKVLSALF 207
                 5788999****98885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1071  (0.0597356); expected 358.6 (0.02)
Passed bias filter:                      520  (0.0290033); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.28s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2075.03
//
Query:       EPX73055.1  [L=65]
Description: hypothetical protein SOCG_00812 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.9e-08   32.8   1.1    1.7e-06   28.1   1.1    2.0  1  Hva1_TUDOR  Hypervirulence associated proteins TUDOR domain
  ------ inclusion threshold ------
       0.13   12.0   0.1       0.13   12.0   0.1    1.0  1  COXG        Carbon monoxide dehydrogenase subunit G (CoxG)


Domain annotation for each model (and alignments):
>> Hva1_TUDOR  Hypervirulence associated proteins TUDOR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.1   1.1   1.8e-10   1.7e-06       1      59 []       7      60 ..       7      60 .. 0.91

  Alignments for each domain:
  == domain 1  score: 28.1 bits;  conditional E-value: 1.8e-10
  Hva1_TUDOR  1 GdrVswkwggG.....estGkVeevltedteakgvtvnaskddPryeiendntGkevahkesel 59
                G +V+++++gG     +stG++ +v+    +a g       ++ ryei+nd+t k++ +ke ++
  EPX73055.1  7 GNKVEYHPIGGasgtsTSTGTILSVK---DDAGG-------EETRYEIQNDHTQKTATYKERNI 60
                899**********************9...44444.......699*****************997 PP

>> COXG  Carbon monoxide dehydrogenase subunit G (CoxG)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   1.5e-05      0.13      71     123 ..      10      63 ..       1      65 [] 0.86

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1.5e-05
                 ..EEEEEE-SSEEEEEEEEEEEEEETT.EEEEEEEEEEEEEHHHHS-HHHHHHH CS
        COXG  71 ieikGkGrgagvaidfalvvlveeggg.trlswsakvnvggllaslGsrlidsa 123
                 +e +  G+++g++ ++  +++v++++g  + +++++ +   + a+  +r+i ++
  EPX73055.1  10 VEYHPIGGASGTSTSTGTILSVKDDAGgEETRYEIQNDHTQKTATYKERNISRV 63 
                 778888999*****************999***************9999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       359  (0.0200234); expected 358.6 (0.02)
Passed bias filter:                      201  (0.0112109); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.20s 00:00:00.59 Elapsed: 00:00:00.40
# Mc/sec: 489.65
//
Query:       EPX73056.1  [L=477]
Description: SAM complex subunit Sam50 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.3e-55  187.2   0.1    6.4e-55  186.9   0.1    1.1  1  Bac_surface_Ag  Surface antigen


Domain annotation for each model (and alignments):
>> Bac_surface_Ag  Surface antigen
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  186.9   0.1   3.6e-59   6.4e-55       1     324 []     158     476 ..     158     476 .. 0.95

  Alignments for each domain:
  == domain 1  score: 186.9 bits;  conditional E-value: 3.6e-59
                     STSSSS-EEEEEEEESS.SEEEEEEEEEESTSSTTS-EEEEEEEEEEGGGTBS.S-EEEEEEEEEEEEEE..ESSSEEEEEEEEEEEEEEES--- CS
  Bac_surface_Ag   1 NllGtGqslslsaslgs.yeqslnlsftePyflgdrvslglslfaresdsdesdsyrtksvgfsvslgrp..ltenyslslglsvqknkilkdss 92 
                     Nl+G ++ ls ++s+g+ ++ +++ +f  P   ++ ++l++  + + +d++ ++s++  + g+svsl+++  +   + ls ++ +++++ l++ +
      EPX73056.1 158 NLFGGAEFLSGNVSYGTrNRATMSAKFETPVNASPATRLRVLGYSNVRDNKAISSHELITRGLSVSLQHQdrFHGLHELSQNFFWRQVTRLSEFA 252
                     9****************88999********888888888888888888999999***************999999******************** PP

                     BHHHHHHHHSCS--EEEEEEEEEEEEEEEEEESSSSS-SSEEEEEEEEEEE-...TTSSS-EEEEEEEEEEEEESSTTSSSEEEEEEEEEEEEES CS
  Bac_surface_Ag  93 sennrnvssasklqtgksltsslslslsydtrddalfPtrGvllklrleftg.pllggdvsylkldakasyyvpltkekdlvlaarvalgyisgy 186
                     s+++r       lq+g++++ sl +s++ dtrd++ +P+rG++++  +e++g +++ gd ++lk++  ++y v+l+++++++la   +lg i+++
      EPX73056.1 253 SPSIR-------LQAGDTIKQSLAYSYVMDTRDHPTLPSRGNYVRALMELAGlGPVTGDARFLKSELWHQYAVSLNRAQSVTLAVSSRLGAIKPL 340
                     **999.......89*************************************999***************************************** PP

                     SSS-.--GGG-B-BSSTTSSTEE-TT-BS-EEEEEEE--BSEEEEEEEEEEEE-SSS-GGTTEEEEEEEEEEEEE-TT--TTTTTTS--TTTS-E CS
  Bac_surface_Ag 187 gtkdelpfyerFyaGGsnsvRGfesgglgprdesgdalGGdsyavaslElrfplpflkkqnsvrlalFfDaGnvwdkegqspsssrsasstaeir 281
                      ++  + +++rF++GGs+s+RGf++  lgp+d  +d+lGG++y+  s+ l fplp+l+ ++ +r+++F++aG +++ + ++p ++++     +  
      EPX73056.1 341 DESP-ILLCDRFTLGGSTSLRGFSEDRLGPKDG-KDSLGGSAYLALSTSLLFPLPKLDASKPFRMQVFANAGGLTNLDARNPLNTYKSIM-MRPC 432
                     **99.**************************98.***********************98888********************99985443.89** PP

                     EEEEEEEEEEETTEEEEEEEEEEEE-STT--EE.SEEEEECEEE CS
  Bac_surface_Ag 282 asvGvgLrwqsPlGPlrfdyAiplkkedgdktq.rFqFgiGttF 324
                     +s+G+gL+++sP ++++++++ip++   gd  + ++q g G +F
      EPX73056.1 433 VSTGLGLVYASPAARFELNFTIPIAVTGGDVGRkGLQLGAGIEF 476
                     *****************************65555*******998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (477 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       336  (0.0187406); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.22s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 3444.63
//
Query:       EPX73057.1  [L=257]
Description: mediator complex subunit Pmc3/Med27 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.1e-08   32.5   0.4    8.1e-08   32.5   0.4    2.3  3  Med27          Mediator complex subunit 27
  ------ inclusion threshold ------
       0.18   12.1   0.2       0.18   12.1   0.2    2.0  2  Jnk-SapK_ap_N  JNK_SAPK-associated protein-1
       0.39   11.4   3.9        7.7    7.3   0.2    2.3  2  FliD_N         Flagellar hook-associated protein 2 N-terminus


Domain annotation for each model (and alignments):
>> Med27  Mediator complex subunit 27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       0.7   4.2e+03      13      28 ..      46      61 ..      43      82 .. 0.55
   2 ?   -2.1   0.0      0.85   5.1e+03      13      35 ..     123     146 ..     114     151 .. 0.68
   3 !   32.5   0.4   1.3e-11   8.1e-08      26      85 ..     190     255 ..     183     256 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.7
       Med27 13 rkitekaekallhfln 28
                +k++ ka++a++ + +
  EPX73057.1 46 QKFQHKAQEAIASVEG 61
                5666666666665443 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.85
       Med27  13 rkitekaekallhflns.rqrela 35 
                  k++ek+e+ l +f +s   ++++
  EPX73057.1 123 SKVPEKLEDVLNNFKSSiSSTNSS 146
                 567788888888887775555555 PP

  == domain 3  score: 32.5 bits;  conditional E-value: 1.3e-11
       Med27  26 flns.rqrelallsllewissYsnlfskpCkkCkkllssdkq.lPpvirdvr.....dsleayHesC 85 
                 ++n+ ++ e+ l +ll ++  Ysnl+skpC+ Ckk++s  +  lP v r+++     ++l ++H +C
  EPX73057.1 190 SINRyNDLEMPLFHLLPLLLDYSNLYSKPCHVCKKVISPINLeLPFV-RKYDyendkNTLLVFHYEC 255
                 44544667889**************************9766579955.55666799999******** PP

>> Jnk-SapK_ap_N  JNK_SAPK-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.4     0.091   5.4e+02      38      96 ..      11      68 ..       4      83 .. 0.78
   2 ?   12.1   0.2   2.9e-05      0.18      55     109 ..     104     158 ..      91     168 .. 0.73

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.091
  Jnk-SapK_ap_N 38 LeslasrneeeeaeleelreeleqLeteyerekelrkraeeeleeiedqweeerkelqe 96
                   L++l + n +   +l elr ++  L + +  e   +++++ + +e+  ++e+ +++l  
     EPX73057.1 11 LDKLDTVN-QLYLKLAELRTTCPALLKLLRPEIGTSQKFQHKAQEAIASVEGLKNDLAY 68
                   55555555.66678899999999999999999999999999998888888888887765 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 2.9e-05
  Jnk-SapK_ap_N  55 lreeleqLeteyerekelrkraeeeleeiedqweeerkelqekveqleeenrele 109
                      ee+e+ e ++++e+ ++ +  e+le + +++++  +  ++ +++l+++  +le
     EPX73057.1 104 TTEEIESVEDKKQEETRQNSKVPEKLEDVLNNFKSSISSTNSSISDLKTDSFMLE 158
                    4567777777777777777777788888888888888888888888887777776 PP

>> FliD_N  Flagellar hook-associated protein 2 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.2    0.0013       7.7      24      60 ..       4      48 ..       2      82 .. 0.74
   2 ?    5.3   0.5    0.0054        32      15      55 ..     111     151 ..     100     178 .. 0.59

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0013
                XXXXXXXXXXHHHHHHHHHHHHHHHHHHHHH........XXGGGG CS
      FliD_N 24 eqkktklewkqsayrelnsklsnlksalsal........sksstf 60
                e++k+ l  k + +++l  kl++l+++  al         +s++f
  EPX73057.1  4 EKQKQALLDKLDTVNQLYLKLAELRTTCPALlkllrpeiGTSQKF 48
                799***********************7633333344443334444 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.0054
                 XXXXXXXXXXXXXXXXXXXHHHHHHHHHHHHHHHHHHHHHX CS
      FliD_N  15 aerakldkleqkktklewkqsayrelnsklsnlksalsals 55 
                 +e +k+++  q+ +  e+  + +++++s++s+ +s++s+l+
  EPX73057.1 111 VEDKKQEETRQNSKVPEKLEDVLNNFKSSISSTNSSISDLK 151
                 44444444444444445555555555555555555554442 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1567  (0.0874003); expected 358.6 (0.02)
Passed bias filter:                      849  (0.0473534); expected 358.6 (0.02)
Passed Vit filter:                        73  (0.00407162); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 1800.84
//
Query:       EPX73058.1  [L=1344]
Description: translation initiation factor eIF4G [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.7e-60  203.7   0.1    6.1e-60  202.5   0.1    1.6  1  MIF4G          MIF4G domain
    1.1e-11   44.8   0.2    3.9e-11   43.0   0.2    2.0  1  eIF_4G1        Eukaryotic translation initiation factor 4G1
    2.5e-06   26.2  38.5    5.8e-06   25.0  38.5    1.5  1  Fibrinogen_BP  Fibrinogen binding protein


Domain annotation for each model (and alignments):
>> MIF4G  MIF4G domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  202.5   0.1     1e-63   6.1e-60       1     210 [.     950    1184 ..     950    1185 .. 0.99

  Alignments for each domain:
  == domain 1  score: 202.5 bits;  conditional E-value: 1e-63
                  HHHHHHHHHCHTTTTHHHHHHHHHHHHHCS....CHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHSH...................HHHHHH CS
       MIF4G    1 lkkvkgilnklskenfevlikqllklamdd....dknelkevielifekaveepsfsplyarlcgklnsrfq...................qnFrik 74  
                  ++kvkg+lnk++ e+fe++ +q+l+ am++    d+++l  vi+l+feka++ep+fs++yar+++k+++ ++                     Fr++
  EPX73058.1  950 QRKVKGSLNKMTLEKFEKISDQILEMAMQSrretDGRTLRLVIQLTFEKATDEPNFSNMYARFARKMMDSIDdsirdenvldkngqpvrggLLFRKY 1046
                  69*********************************************************************************************** PP

                  HHHHHHHHHHHHC............-S-HHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEHHHHHHHHHHHHHGGCCCCSCCHSCHHHHHHHHHHHHH CS
       MIF4G   75 llnklqeefekry............eleneleenedgnrrrrlglvrflgelfklkmltskilldclkellssltketaddppqdleeieilltllt 159 
                  ll+++qe+fe+ +            e ++ +++ ++  +rr lglvrf+gelfkl+ml++ki+++c+k+ll ++t+       +++eeie l++ll+
  EPX73058.1 1047 LLSRCQEDFERGWkanlpaggageaEIMSDEYYVAAAIKRRGLGLVRFIGELFKLSMLSEKIMHECIKRLLGNVTD-------PEEEEIESLCKLLM 1136
                  ****************************************************************************.......779*********** PP

                  HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHCSSSSHHHHHHHHHHHHHHH CS
       MIF4G  160 tigktlennekakkeldqffkriqkiledatrqelssrirfmlkdlielkk 210 
                  t+g +++++ek ++++d ++ r+++i ++   ++l+sri+fml d+i+ ++
  EPX73058.1 1137 TVGVNIDATEKGHAAMDVYVLRMETITKI---PNLPSRIKFMLLDVIDSRR 1184
                  *****************************...9***************986 PP

>> eIF_4G1  Eukaryotic translation initiation factor 4G1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.0   0.2   6.5e-15   3.9e-11       8      69 ..     729     790 ..     725     791 .. 0.96

  Alignments for each domain:
  == domain 1  score: 43.0 bits;  conditional E-value: 6.5e-15
     eIF_4G1   8 eeptisaflesLksArpiediysvkYPegiesPdpalnkeakkyrYdpdFLLQFkdvvkekp 69 
                  +p++sa l sL +A+ i di+++ YP++i++P+ + + +  k  Yd  FL+QF++ ++ kp
  EPX73058.1 729 SQPKPSASLDSLLQASIISDISKIVYPSSIKRPATEGEIKDGKLLYDIPFLMQFQTYYTDKP 790
                 6899*******************************************************998 PP

>> Fibrinogen_BP  Fibrinogen binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0  38.5   9.7e-10   5.8e-06      86     233 ..     529     676 ..     510     714 .. 0.47

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 9.7e-10
  Fibrinogen_BP  86 aenrsqgnvlerrqrdaenrsqgnvlerrqrdaenksqgnvlerrqrdaenrsqgnvlerrqrdaenrsqgnvlerrqrdaenrsqgnvlerrqrd 181
                    +++r q +  e  +r ae++++ +  e+ +r+ae+k++ +  e+ +r+ae++++ +  e+ +r+ae++++ +  e+ +r+ae++++ +  e+ +r+
     EPX73058.1 529 VQQRIQEKAEEEARRHAEEQAKREAEEKAKREAEEKAKREAEEKAKREAEEQAKREAEEQAKREAEEKAKREAEEKVKREAEEKAKREAEEQAKRE 624
                    333334444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 PP

  Fibrinogen_BP 182 aenksqgnvlerrqrdaenrsqgnvlerrqrdaenrsqgnvlerrqrdaenr 233
                    ae+k++ +  e+ +r+ae++++ +  e+ + +ae+r++ ++ e+ + ++e  
     EPX73058.1 625 AEEKAKRESEEQAKREAEEKAKQEAEEKTKHEAEERARKEIEEKAKVEVEAE 676
                    4444444444444444444444444444444444444444444444333322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1344 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3180  (0.177366); expected 358.6 (0.02)
Passed bias filter:                      819  (0.0456802); expected 358.6 (0.02)
Passed Vit filter:                       537  (0.0299515); expected 17.9 (0.001)
Passed Fwd filter:                       193  (0.0107647); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 4.32u 0.43s 00:00:04.75 Elapsed: 00:00:00.93
# Mc/sec: 4361.20
//
Query:       EPX73059.1  [L=272]
Description: alpha-aminoadipate reductase phosphopantetheinyl transferase Lys7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.7e-10   39.9   0.0    6.3e-10   39.2   0.0    1.4  1  ACPS      4'-phosphopantetheinyl transferase superfamily


Domain annotation for each model (and alignments):
>> ACPS  4'-phosphopantetheinyl transferase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.2   0.0   3.5e-14   6.3e-10       2      77 ..     120     189 ..     119     225 .. 0.87

  Alignments for each domain:
  == domain 1  score: 39.2 bits;  conditional E-value: 3.5e-14
                 EEEEEEEHHHHH.HHH-----HHHHHS-HHHHHHHTT--HHHHHHHHHHHHHHHHHHHHHTTS-SSSS--GGG-EE CS
        ACPS   2 vGiDieklsrlrkrvkrrgakilkrifteeErkllkssdeearaelfarlWaaKEAllKalgpglrklldfksiev 77 
                 +G+D+++++ l++++++  +  ++ +f+ e+++l+ s+d+     +f+++W+ KEA+lK+lg gl    ++  +ev
  EPX73059.1 120 IGVDVVECKSLSEESNWMED--FEFVFNREQWNLIFSCDDRLI--AFFLFWSCKEAVLKSLGLGL--HGNPALVEV 189
                 9***********99999999..***************877777..********************..444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       372  (0.0207485); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.29s 00:00:00.85 Elapsed: 00:00:00.51
# Mc/sec: 1616.54
//
Query:       EPX73060.1  [L=663]
Description: anaphase-promoting complex subunit Apc3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.2e-35  117.4  16.9    2.3e-07   30.4   0.1   11.1 12  TPR_2          Tetratricopeptide repeat
    3.4e-35  118.4  17.0      6e-08   32.2   0.1    9.9 10  TPR_1          Tetratricopeptide repeat
      1e-31  106.4  14.7    1.1e-05   25.3   0.0   10.5 10  TPR_8          Tetratricopeptide repeat
    3.2e-27   94.6  21.4    1.9e-19   69.7   1.0    6.5  7  ANAPC3         Anaphase-promoting complex, cyclosome, subunit
      1e-18   67.6   2.3    0.00049   20.6   0.1    5.9  5  TPR_19         Tetratricopeptide repeat
    1.6e-18   65.7   9.9     0.0092   16.3   0.0    8.2  8  TPR_17         Tetratricopeptide repeat
    7.1e-17   60.7   0.0       0.14   13.0   0.0    9.0 10  TPR_14         Tetratricopeptide repeat
    7.4e-16   57.6   0.7    0.00068   19.3   0.0    7.5  7  TPR_11         TPR repeat
    4.1e-15   55.8   2.0      0.005   17.1   0.1    7.7  7  TPR_12         Tetratricopeptide repeat
    1.5e-11   44.1   2.8      0.038   14.6   0.0    7.6  8  TPR_6          Tetratricopeptide repeat
    4.1e-09   36.9   0.0    0.00024   21.7   0.0    5.0  4  TPR_16         Tetratricopeptide repeat
    7.4e-09   35.0   0.0        3.8    7.8   0.0    7.0  7  TPR_7          Tetratricopeptide repeat
    1.9e-06   27.9   0.1       0.31   11.2   0.0    4.1  3  TPR_9          Tetratricopeptide repeat
    0.00023   20.5   0.0        2.6    7.2   0.0    4.2  4  TPR_15         Tetratricopeptide repeat
     0.0088   15.9   0.3         84    3.2   0.0    5.4  6  TPR_10         Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.013   15.6   0.5       0.11   12.6   0.1    2.6  2  Mad3_BUB1_I_2  Putative Mad3/BUB1 like region 1 protein
      0.017   15.7   0.1        2.6    8.7   0.0    3.9  4  DUF4810        Domain of unknown function (DUF4810)
      0.018   14.0   0.0        0.3   10.1   0.0    2.5  2  ChAPs          ChAPs (Chs5p-Arf1p-binding proteins)
       0.13   12.1   3.2          7    6.5   0.2    3.6  3  PPTA           Protein prenyltransferase alpha subunit repeat
       0.24   11.5   2.5         30    4.7   0.0    3.9  4  TPR_3          Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.1       1.2   1.1e+03      13      28 ..      14      29 ..      10      32 .. 0.84
   2 ?    1.5   0.2      0.47   4.3e+02       2      25 ..      36      59 ..      35      63 .. 0.86
   3 ?   -1.5   0.0       4.2   3.8e+03       7      22 ..      71      86 ..      69      91 .. 0.77
   4 !   13.2   0.0   8.3e-05     0.074       7      34 .]     121     148 ..     118     148 .. 0.93
   5 ?   -1.7   0.2       4.9   4.4e+03       6      24 ..     332     350 ..     330     351 .. 0.74
   6 !   12.0   0.0    0.0002      0.18       2      32 ..     362     392 ..     361     394 .. 0.92
   7 !   18.7   0.0   1.5e-06    0.0013       1      33 [.     429     461 ..     429     462 .. 0.96
   8 !   11.3   0.1   0.00034      0.31       3      31 ..     465     493 ..     463     496 .. 0.91
   9 !   30.4   0.1   2.5e-10   2.3e-07       2      34 .]     498     530 ..     497     530 .. 0.97
  10 !   11.7   0.0   0.00026      0.23       6      32 ..     536     562 ..     533     564 .. 0.91
  11 !    9.0   0.1    0.0019       1.7       3      33 ..     567     597 ..     565     598 .. 0.91
  12 !    8.7   0.0    0.0023         2       1      24 [.     599     622 ..     599     625 .. 0.91

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 1.2
       TPR_2 13 klgdyeeAleafekAl 28
                 +++y+ A+ + e+  
  EPX73060.1 14 DNQQYKNAIFYAERLH 29
                6799*******99975 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.47
       TPR_2  2 ealynlGlayyklgdyeeAleafe 25
                e ly l+++++ + dy+ A ++++
  EPX73060.1 36 ESLYLLAYSHLLNLDYNIAFDLLN 59
                689**********99998877665 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 4.2
       TPR_2  7 lGlayyklgdyeeAle 22
                 +++++ lg+y++ + 
  EPX73060.1 71 YAKVCLILGRYKQGIT 86
                5789999****98766 PP

  == domain 4  score: 13.2 bits;  conditional E-value: 8.3e-05
       TPR_2   7 lGlayyklgdyeeAleafekAleldPnn 34 
                 lGl y k+g  ++A e+f ++++++P n
  EPX73060.1 121 LGLMYKKAGYIKKATECFVESISINPYN 148
                 9*************************76 PP

  == domain 5  score: -1.7 bits;  conditional E-value: 4.9
       TPR_2   6 nlGlayyklgdyeeAleaf 24 
                 + G+  ++  ++++Al +f
  EPX73060.1 332 AKGCYFLACFQLKDALSYF 350
                 6677777778888888887 PP

  == domain 6  score: 12.0 bits;  conditional E-value: 0.0002
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleldP 32 
                  +l  +G  y+++ +ye+A++ f+k   l P
  EPX73060.1 362 FVLSKIGVTYFEMVNYEKAEDVFQKLRDLRP 392
                 578999********************99998 PP

  == domain 7  score: 18.7 bits;  conditional E-value: 1.5e-06
       TPR_2   1 aealynlGlayyklgdyeeAleafekAleldPn 33 
                 +ea++ l+++   + ++ +Al++ ++ l+ldP+
  EPX73060.1 429 PEAWCILANCFSLQREHSQALKCINRGLQLDPT 461
                 69******************************8 PP

  == domain 8  score: 11.3 bits;  conditional E-value: 0.00034
       TPR_2   3 alynlGlayyklgdyeeAleafekAleld 31 
                 a+  +G  + ++ +ye+ +  f+kA++++
  EPX73060.1 465 AYTLQGHEHSANEEYEKSKTSFRKAIRIN 493
                 78899999*******************98 PP

  == domain 9  score: 30.4 bits;  conditional E-value: 2.5e-10
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleldPnn 34 
                  a+y lG++y+k g+ ++A  +f++A e++Pnn
  EPX73060.1 498 NAWYGLGMVYLKTGRNDQADFHFQRAAEINPNN 530
                 59******************************8 PP

  == domain 10  score: 11.7 bits;  conditional E-value: 0.00026
       TPR_2   6 nlGlayyklgdyeeAleafekAleldP 32 
                 ++G++ ++ +d+e+Ale++ kA eld 
  EPX73060.1 536 CIGMIFERCKDFEKALEFYCKACELDD 562
                 789**********************96 PP

  == domain 11  score: 9.0 bits;  conditional E-value: 0.0019
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldPn 33 
                 a +  +++++ l +y++Al  +e+  +++P+
  EPX73060.1 567 ARFKKAKVLILLHNYDRALIELERLKSIAPD 597
                 568899*******************999997 PP

  == domain 12  score: 8.7 bits;  conditional E-value: 0.0023
       TPR_2   1 aealynlGlayyklgdyeeAleaf 24 
                 a ++++lG++y ++g+ + A +++
  EPX73060.1 599 ANVHFMLGKIYKQRGQKNMAMRHL 622
                 679*****************9997 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.2       5.8   5.2e+03      15      25 ..      16      26 ..      14      27 .. 0.79
   2 ?    0.9   0.1      0.52   4.7e+02       2      30 ..      36      64 ..      35      66 .. 0.86
   3 !   10.6   0.0   0.00045       0.4       7      34 .]     121     148 ..     120     148 .. 0.96
   4 !   13.3   0.0   6.1e-05     0.054       3      32 ..     363     392 ..     361     394 .. 0.87
   5 !   28.6   0.0     9e-10   8.1e-07       1      34 []     429     462 ..     429     462 .. 0.97
   6 !   13.4   0.1   5.6e-05     0.051       2      31 ..     464     493 ..     463     496 .. 0.94
   7 !   32.2   0.1   6.7e-11     6e-08       2      34 .]     498     530 ..     497     530 .. 0.97
   8 !   13.8   0.1   4.4e-05      0.04       7      31 ..     537     561 ..     534     564 .. 0.92
   9 ?    0.4   0.0      0.74   6.7e+02       4      21 ..     568     585 ..     565     596 .. 0.86
  10 !    7.1   0.0    0.0056         5       1      24 [.     599     622 ..     599     625 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 5.8
                T-HHHHHHHHH CS
       TPR_1 15 gkydeAleyye 25
                ++y+ A+ y e
  EPX73060.1 16 QQYKNAIFYAE 26
                799***99866 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.52
                HHHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
       TPR_1  2 kalynlGnayfklgkydeAleyyekALel 30
                ++ly l++ ++ + +y+ A +  ++ +++
  EPX73060.1 36 ESLYLLAYSHLLNLDYNIAFDLLNRNIKH 64
                679**************999999887776 PP

  == domain 3  score: 10.6 bits;  conditional E-value: 0.00045
                 HHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   7 lGnayfklgkydeAleyyekALelnPnn 34 
                 lG++y k g  ++A e++ + +++nP n
  EPX73060.1 121 LGLMYKKAGYIKKATECFVESISINPYN 148
                 89************************76 PP

  == domain 4  score: 13.3 bits;  conditional E-value: 6.1e-05
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHST CS
       TPR_1   3 alynlGnayfklgkydeAleyyekALelnP 32 
                 +l  +G++yf++ +y++A++ ++k   l+P
  EPX73060.1 363 VLSKIGVTYFEMVNYEKAEDVFQKLRDLRP 392
                 57789******************9777777 PP

  == domain 5  score: 28.6 bits;  conditional E-value: 9e-10
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   1 akalynlGnayfklgkydeAleyyekALelnPnn 34 
                 ++a++ l+n++  + ++ +Al++ ++ L+l+P++
  EPX73060.1 429 PEAWCILANCFSLQREHSQALKCINRGLQLDPTF 462
                 68******************************96 PP

  == domain 6  score: 13.4 bits;  conditional E-value: 5.6e-05
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHS CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALeln 31 
                 +a+   G+ +  +++y++    ++kA+++n
  EPX73060.1 464 YAYTLQGHEHSANEEYEKSKTSFRKAIRIN 493
                 59999************************9 PP

  == domain 7  score: 32.2 bits;  conditional E-value: 6.7e-11
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALelnPnn 34 
                 +a+y+lG++y+k g+ d+A  ++++A e+nPnn
  EPX73060.1 498 NAWYGLGMVYLKTGRNDQADFHFQRAAEINPNN 530
                 79******************************8 PP

  == domain 8  score: 13.8 bits;  conditional E-value: 4.4e-05
                 HHHHHHHTT-HHHHHHHHHHHHHHS CS
       TPR_1   7 lGnayfklgkydeAleyyekALeln 31 
                 +G+++ + +++++Ale+y kA el+
  EPX73060.1 537 IGMIFERCKDFEKALEFYCKACELD 561
                 8********************9999 PP

  == domain 9  score: 0.4 bits;  conditional E-value: 0.74
                 HHHHHHHHHHTT-HHHHH CS
       TPR_1   4 lynlGnayfklgkydeAl 21 
                  + ++ ++  l +yd Al
  EPX73060.1 568 RFKKAKVLILLHNYDRAL 585
                 567889999999***997 PP

  == domain 10  score: 7.1 bits;  conditional E-value: 0.0056
                 HHHHHHHHHHHHHTT-HHHHHHHH CS
       TPR_1   1 akalynlGnayfklgkydeAleyy 24 
                 a++++ lG +y + g+ + A  + 
  EPX73060.1 599 ANVHFMLGKIYKQRGQKNMAMRHL 622
                 68999***************9875 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1       1.2   1.1e+03      12      26 ..      13      27 ..      10      28 .. 0.85
   2 ?    1.7   0.0      0.45     4e+02       7      27 ..      71      91 ..      66      91 .. 0.87
   3 !   12.6   0.0   0.00014      0.12       6      33 ..     120     147 ..     115     148 .. 0.91
   4 !    8.0   0.0    0.0042       3.7       6      32 ..     366     392 ..     363     394 .. 0.86
   5 !    9.4   0.0    0.0014       1.3       2      33 ..     430     461 ..     429     462 .. 0.96
   6 !   17.1   0.1   4.8e-06    0.0043       3      32 ..     465     494 ..     463     496 .. 0.93
   7 !   25.3   0.0   1.2e-08   1.1e-05       2      34 .]     498     530 ..     497     530 .. 0.96
   8 !   16.1   0.1   1.1e-05    0.0097       7      33 ..     537     563 ..     537     564 .. 0.94
   9 ?    4.4   0.1     0.058        52       4      33 ..     568     597 ..     566     598 .. 0.93
  10 !   10.1   0.0   0.00085      0.76       1      22 [.     599     620 ..     599     623 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 1.2
                HHTT-HHHHHHHHHH CS
       TPR_8 12 lklgdyeeAkeyyek 26
                ++ ++y++A+ y e+
  EPX73060.1 13 IDNQQYKNAIFYAER 27
                67899*******986 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.45
                HHHHHHHTT-HHHHHHHHHHH CS
       TPR_8  7 lgsiylklgdyeeAkeyyeka 27
                 ++++l lg+y++ + ++e +
  EPX73060.1 71 YAKVCLILGRYKQGITSIETC 91
                6889999********999987 PP

  == domain 3  score: 12.6 bits;  conditional E-value: 0.00014
                 HHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   6 nlgsiylklgdyeeAkeyyekaleldpd 33 
                  lg+ y+k g +++A e++ + ++++p 
  EPX73060.1 120 VLGLMYKKAGYIKKATECFVESISINPY 147
                 69************************95 PP

  == domain 4  score: 8.0 bits;  conditional E-value: 0.0042
                 HHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   6 nlgsiylklgdyeeAkeyyekaleldp 32 
                 ++g +y+++ +ye+A+ +++k  +l+p
  EPX73060.1 366 KIGVTYFEMVNYEKAEDVFQKLRDLRP 392
                 79******************9866666 PP

  == domain 5  score: 9.4 bits;  conditional E-value: 0.0014
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldpd 33 
                 ea++ l+++ + + ++ +A +++++ l+ldp+
  EPX73060.1 430 EAWCILANCFSLQREHSQALKCINRGLQLDPT 461
                 89****************************96 PP

  == domain 6  score: 17.1 bits;  conditional E-value: 4.8e-06
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyekaleldp 32 
                 ay + g+ ++  ++ye++k +++ka++++ 
  EPX73060.1 465 AYTLQGHEHSANEEYEKSKTSFRKAIRINA 494
                 899*************************97 PP

  == domain 7  score: 25.3 bits;  conditional E-value: 1.2e-08
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldpdn 34 
                  a+y lg++ylk+g+ ++A   +++a e++p+n
  EPX73060.1 498 NAWYGLGMVYLKTGRNDQADFHFQRAAEINPNN 530
                 69*****************************97 PP

  == domain 8  score: 16.1 bits;  conditional E-value: 1.1e-05
                 HHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   7 lgsiylklgdyeeAkeyyekaleldpd 33 
                 +g+i +  +d+e+A e+y ka+eld +
  EPX73060.1 537 IGMIFERCKDFEKALEFYCKACELDDK 563
                 79**********************965 PP

  == domain 9  score: 4.4 bits;  conditional E-value: 0.058
                 HHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   4 yynlgsiylklgdyeeAkeyyekaleldpd 33 
                  ++++++++ l +y+ A   +e+  +++pd
  EPX73060.1 568 RFKKAKVLILLHNYDRALIELERLKSIAPD 597
                 68999***********************98 PP

  == domain 10  score: 10.1 bits;  conditional E-value: 0.00085
                 CCHHHHHHHHHHHTT-HHHHHH CS
       TPR_8   1 aeayynlgsiylklgdyeeAke 22 
                 a ++++lg+iy++ g++++A+ 
  EPX73060.1 599 ANVHFMLGKIYKQRGQKNMAMR 620
                 5689***************985 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.7   1.0   2.1e-22   1.9e-19       1      81 [.      14      90 ..      14      91 .. 0.97
   2 ?    1.6   0.1      0.38   3.4e+02      39      81 ..     343     386 ..     316     387 .. 0.71
   3 ?    2.0   0.0      0.27   2.4e+02      32      61 ..     370     400 ..     362     412 .. 0.70
   4 !   12.7   0.3   0.00012      0.11      10      58 ..     416     464 ..     397     470 .. 0.73
   5 !   11.8   0.4   0.00023      0.21       2      80 ..     442     521 ..     442     523 .. 0.92
   6 !   12.3   1.1   0.00017      0.15      37      81 ..     545     590 ..     527     591 .. 0.92
   7 !    8.7   0.0    0.0023       2.1       3      49 ..     579     625 ..     578     636 .. 0.80

  Alignments for each domain:
  == domain 1  score: 69.7 bits;  conditional E-value: 2.1e-22
                HTT-HHHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCTSHHHC-HHHHHHHHHHHHHTT-HHHHHHHH-S CS
      ANAPC3  1 dqnnyknAiflaerllaaetespedayllAlclylngqykrAyellrkaklnskslgcrylfAqcllkLkkyeeAiaaLek 81
                d+++yknAif+aerl+ a  +s e++yllA++++ln +y+ A++ll+++    k++ c +++A+++l L++y+++i+ +e 
  EPX73060.1 14 DNQQYKNAIFYAERLH-AVEDSGESLYLLAYSHLLNLDYNIAFDLLNRN---IKHIPCVFVYAKVCLILGRYKQGITSIET 90
                689*************.********************************...9************************9986 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.38
                 HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH-S CS
      ANAPC3  39 ykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaLek 81 
                  k A+ ++ ++ ++  +++ ++  ++ +++++ +ye+A+++++k
  EPX73060.1 343 LKDALSYFLSLpREHRTTPFVLSKIGVTYFEMVNYEKAEDVFQK 386
                 55566666666555555555555666788888888888888876 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.27
                 HHHHTT-HHHHHHHHHCT.SHHHC-HHHHHH CS
      ANAPC3  32 clylngqykrAyellrka.klnskslgcryl 61 
                 +++++ +y++A ++++k+ +l+++      +
  EPX73060.1 370 TYFEMVNYEKAEDVFQKLrDLRPSQVTDMEI 400
                 6888888888888888887777666655555 PP

  == domain 4  score: 12.7 bits;  conditional E-value: 0.00012
                 HHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCTSHHHC-HHH CS
      ANAPC3  10 flaerllaaetespedayllAlclylngqykrAyellrkaklnskslgc 58 
                  la  +l+++++spe+   lA c+ l+ ++ +A++ +++  + + + ++
  EPX73060.1 416 YLAHEMLETNPYSPEAWCILANCFSLQREHSQALKCINRGLQLDPTFEY 464
                 23334448***************************99998444455555 PP

  == domain 5  score: 11.8 bits;  conditional E-value: 0.00023
                 TT-HHHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH- CS
      ANAPC3   2 qnnyknAiflaerllaaetespedayllAlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaLe 80 
                 q+ +  A+ +++r l+ ++  +++  l +  +  n++y++  + +rka ++n ++ +++y ++ ++lk ++ ++A  +++
  EPX73060.1 442 QREHSQALKCINRGLQLDPTFEYAYTLQGHEHSANEEYEKSKTSFRKAiRINARHYNAWYGLGMVYLKTGRNDQADFHFQ 521
                 567899*********9999999999999**********************************************977766 PP

  == domain 6  score: 12.3 bits;  conditional E-value: 0.00017
                 T-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH-S CS
      ANAPC3  37 gqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaLek 81 
                 +++++A+e++ ka +l++ks  +r+ +A++l+ L++y+ A+  Le+
  EPX73060.1 545 KDFEKALEFYCKAcELDDKSSLARFKKAKVLILLHNYDRALIELER 590
                 79**************************************988876 PP

  == domain 7  score: 8.7 bits;  conditional E-value: 0.0023
                 T-HHHHHHHHHHHH.HHH--HHH.HHHHHHHHHHTT-HHHHHHHHHCT CS
      ANAPC3   3 nnyknAiflaerllaaetesped.ayllAlclylngqykrAyellrka 49 
                 +ny+ A++ +erl  + + ++ +  ++l++ + ++gq + A++ l  a
  EPX73060.1 579 HNYDRALIELERLK-SIAPDEANvHFMLGKIYKQRGQKNMAMRHLTIA 625
                 89************.6655555516669**************988766 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.3     0.066        59       2      33 ..      13      43 ..      12      60 .. 0.82
   2 ?    2.5   0.0      0.23     2e+02      34      57 ..     370     393 ..     363     399 .. 0.87
   3 !   14.7   0.0   3.7e-05     0.033      15      65 ..     419     469 ..     407     471 .. 0.90
   4 !   19.2   0.0   1.5e-06    0.0013      13      59 ..     485     531 ..     475     535 .. 0.88
   5 !   20.6   0.1   5.5e-07   0.00049       6      66 ..     546     606 ..     545     625 .. 0.95

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.066
      TPR_19  2 laegdyaeAlalleqalqedpknaearllLAe 33
                +++++y +A+ + e+ l +  +++e ++lLA 
  EPX73060.1 13 IDNQQYKNAIFYAER-LHAVEDSGESLYLLAY 43
                689************.5777888888888886 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.23
      TPR_19  34 allalgqldeAealLdalpeedpd 57 
                  ++++ ++++Ae++ ++l +  p 
  EPX73060.1 370 TYFEMVNYEKAEDVFQKLRDLRPS 393
                 689999************998876 PP

  == domain 3  score: 14.7 bits;  conditional E-value: 3.7e-05
      TPR_19  15 eqalqedpknaearllLAeallalgqldeAealLdalpeedpddaryasLl 65 
                  ++l+ +p ++ea+  LA++   + +  +A +++++ ++ dp  +++ +L+
  EPX73060.1 419 HEMLETNPYSPEAWCILANCFSLQREHSQALKCINRGLQLDPTFEYAYTLQ 469
                 569999*************************************88888887 PP

  == domain 4  score: 19.2 bits;  conditional E-value: 1.5e-06
      TPR_19  13 lleqalqedpknaearllLAeallalgqldeAealLdalpeedpdda 59 
                  +++a+  ++ + +a+++L  ++l++g+ d+A    +++ e +p+++
  EPX73060.1 485 SFRKAIRINARHYNAWYGLGMVYLKTGRNDQADFHFQRAAEINPNNS 531
                 689999**************************************965 PP

  == domain 5  score: 20.6 bits;  conditional E-value: 5.5e-07
      TPR_19   6 dyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpddaryasLlA 66 
                 d++ Al+++ +a + d k++ ar   A++l+ l ++d A   L++l   +pd+a+++  l+
  EPX73060.1 546 DFEKALEFYCKACELDDKSSLARFKKAKVLILLHNYDRALIELERLKSIAPDEANVHFMLG 606
                 999***************************************************9995555 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.2       3.7   3.3e+03      12      26 ..      34      48 ..      32      54 .. 0.79
   2 ?    0.7   0.0         1     9e+02       2      19 ..     138     155 ..     137     156 .. 0.87
   3 !    8.7   0.0    0.0028       2.5       6      33 ..     422     449 ..     420     450 .. 0.88
   4 ?    0.7   0.0         1   9.1e+02       2      30 ..     452     480 ..     451     483 .. 0.77
   5 !   16.3   0.0     1e-05    0.0092       2      32 ..     486     516 ..     485     518 .. 0.96
   6 !   14.5   0.0   3.7e-05     0.034       2      34 .]     520     552 ..     519     552 .. 0.95
   7 !    7.6   0.1    0.0059       5.3       4      33 ..     556     585 ..     553     586 .. 0.94
   8 !   14.1   0.0   5.3e-05     0.047       9      32 ..     595     618 ..     591     620 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 3.7
      TPR_17 12 nadaynnLAelllkn 26
                + +++++LA+ +l n
  EPX73060.1 34 SGESLYLLAYSHLLN 48
                6799*****987755 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 1
      TPR_17   2 ylkaleldPnnadaynnL 19 
                 + +++ ++P n+  ++nL
  EPX73060.1 138 FVESISINPYNFTCFQNL 155
                 6689********999997 PP

  == domain 3  score: 8.7 bits;  conditional E-value: 0.0028
      TPR_17   6 leldPnnadaynnLAelllknGdlmtAr 33 
                 le +P +++a++ LA++++ + ++ +A+
  EPX73060.1 422 LETNPYSPEAWCILANCFSLQREHSQAL 449
                 899***************9988877775 PP

  == domain 4  score: 0.7 bits;  conditional E-value: 1
      TPR_17   2 ylkaleldPnnadaynnLAelllknGdlm 30 
                   + l+ldP+  +ay++ +  ++ n +++
  EPX73060.1 452 INRGLQLDPTFEYAYTLQGHEHSANEEYE 480
                 56889999999999998887777776666 PP

  == domain 5  score: 16.3 bits;  conditional E-value: 1e-05
      TPR_17   2 ylkaleldPnnadaynnLAelllknGdlmtA 32 
                 ++ka++++  + +a++ L+ ++lk G+ ++A
  EPX73060.1 486 FRKAIRINARHYNAWYGLGMVYLKTGRNDQA 516
                 78*************************9998 PP

  == domain 6  score: 14.5 bits;  conditional E-value: 3.7e-05
      TPR_17   2 ylkaleldPnnadaynnLAelllknGdlmtArq 34 
                 +++a+e++Pnn+++    + ++++ +d+++A++
  EPX73060.1 520 FQRAAEINPNNSVLISCIGMIFERCKDFEKALE 552
                 89***************************9975 PP

  == domain 7  score: 7.6 bits;  conditional E-value: 0.0059
      TPR_17   4 kaleldPnnadaynnLAelllknGdlmtAr 33 
                 ka eld +++ a + +A++l  ++++++A+
  EPX73060.1 556 KACELDDKSSLARFKKAKVLILLHNYDRAL 585
                 899*************************96 PP

  == domain 8  score: 14.1 bits;  conditional E-value: 5.3e-05
      TPR_17   9 dPnnadaynnLAelllknGdlmtA 32 
                  P+ a+++++L+++++++G++ +A
  EPX73060.1 595 APDEANVHFMLGKIYKQRGQKNMA 618
                 6999****************9998 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0       1.9   1.7e+03       5      30 ..       6      31 ..       3      44 .. 0.75
   2 ?   -0.3   0.0         3   2.7e+03       7      25 ..      71      89 ..      68      95 .. 0.86
   3 ?    0.1   0.0       2.2     2e+03       6      34 ..     120     148 ..     116     157 .. 0.86
   4 ?    1.1   0.0       1.1   9.6e+02      16      34 ..     376     394 ..     363     401 .. 0.83
   5 ?    4.4   0.0     0.094        85      23      42 ..     417     436 ..     400     438 .. 0.79
   6 !   11.4   0.0   0.00052      0.46       1      39 [.     429     467 ..     429     470 .. 0.92
   7 ?    4.5   0.0     0.085        76       7      42 ..     469     504 ..     465     504 .. 0.86
   8 !   12.5   0.0   0.00023      0.21       2      36 ..     498     532 ..     497     534 .. 0.94
   9 !    8.1   0.0     0.006       5.3       7      43 ..     537     573 ..     533     574 .. 0.90
  10 !   13.0   0.0   0.00016      0.14       4      43 ..     568     607 ..     567     608 .. 0.92

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 1.9
      TPR_14  5 lalaeallalGdpdeAiallrralal 30
                ++l+++   +++++ Ai +++r+ a 
  EPX73060.1  6 KCLVWYSIDNQQYKNAIFYAERLHAV 31
                57788888999***********8773 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 3
      TPR_14  7 laeallalGdpdeAiallr 25
                +a+++l lG++++ i+  +
  EPX73060.1 71 YAKVCLILGRYKQGITSIE 89
                89**********9998766 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 2.2
      TPR_14   6 alaeallalGdpdeAiallrralalaPdd 34 
                  l+  +  +G  ++A +++ + ++ +P +
  EPX73060.1 120 VLGLMYKKAGYIKKATECFVESISINPYN 148
                 57888999*****************9987 PP

  == domain 4  score: 1.1 bits;  conditional E-value: 1.1
      TPR_14  16 dpdeAiallrralalaPdd 34 
                 ++++A+++++++ +l P++
  EPX73060.1 376 NYEKAEDVFQKLRDLRPSQ 394
                 899*********9999986 PP

  == domain 5  score: 4.4 bits;  conditional E-value: 0.094
      TPR_14  23 llrralalaPddaeawllla 42 
                 l++++l+++P ++eaw  la
  EPX73060.1 417 LAHEMLETNPYSPEAWCILA 436
                 67899***********9887 PP

  == domain 6  score: 11.4 bits;  conditional E-value: 0.00052
      TPR_14   1 peallalaeallalGdpdeAiallrralalaPddaeawl 39 
                 pea+  la  +  ++++ +A+++ +r l+l+P+++ a++
  EPX73060.1 429 PEAWCILANCFSLQREHSQALKCINRGLQLDPTFEYAYT 467
                 799999***************************998886 PP

  == domain 7  score: 4.5 bits;  conditional E-value: 0.085
      TPR_14   7 laeallalGdpdeAiallrralalaPddaeawllla 42 
                  ++ + a+++++++ + +r+a++ +  +  aw+ l+
  EPX73060.1 469 QGHEHSANEEYEKSKTSFRKAIRINARHYNAWYGLG 504
                 567788999*******************99999875 PP

  == domain 8  score: 12.5 bits;  conditional E-value: 0.00023
      TPR_14   2 eallalaeallalGdpdeAiallrralalaPddae 36 
                 +a++ l+ ++l  G+ d+A  +++ra + +P++ +
  EPX73060.1 498 NAWYGLGMVYLKTGRNDQADFHFQRAAEINPNNSV 532
                 69*****************************9975 PP

  == domain 9  score: 8.1 bits;  conditional E-value: 0.006
      TPR_14   7 laeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 ++ ++++  d+++A++ + +a++l+ ++  a++  a+
  EPX73060.1 537 IGMIFERCKDFEKALEFYCKACELDDKSSLARFKKAK 573
                 567899**************************99886 PP

  == domain 10  score: 13.0 bits;  conditional E-value: 0.00016
      TPR_14   4 llalaeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 + + a++l  l ++d+A+  l+r+ + aPd+a ++++l++
  EPX73060.1 568 RFKKAKVLILLHNYDRALIELERLKSIAPDEANVHFMLGK 607
                 5677999*******************************98 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0      0.15   1.3e+02       1      29 [.     122     150 ..     122     155 .. 0.88
   2 ?   -1.4   0.0       2.3     2e+03       4      26 ..     371     393 ..     364     396 .. 0.68
   3 ?    5.8   0.0     0.013        11      10      32 ..     445     467 ..     441     476 .. 0.88
   4 !   19.3   0.0   7.6e-07   0.00068       4      42 .]     473     511 ..     470     511 .. 0.91
   5 !    6.9   0.0    0.0056         5       3      27 ..     506     530 ..     506     543 .. 0.92
   6 !    8.6   0.0    0.0017       1.5       8      38 ..     545     575 ..     538     579 .. 0.88
   7 !    9.8   0.0   0.00068      0.61       9      42 .]     580     613 ..     572     613 .. 0.88

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.15
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldPdnae 29 
                 G +y + G +++A e++ + + ++P n +
  EPX73060.1 122 GLMYKKAGYIKKATECFVESISINPYNFT 150
                 789999*******************8876 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 2.3
      TPR_11   4 yyeqGkyeeAieaYkkAlkldPd 26 
                 y+e  +ye+A  +++k  +l+P+
  EPX73060.1 371 YFEMVNYEKAEDVFQKLRDLRPS 393
                 56666777777777777777776 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.013
      TPR_11  10 yeeAieaYkkAlkldPdnaeayy 32 
                   +A+++ ++ l+ldP++  ay 
  EPX73060.1 445 HSQALKCINRGLQLDPTFEYAYT 467
                 57999****************96 PP

  == domain 4  score: 19.3 bits;  conditional E-value: 7.6e-07
      TPR_11   4 yyeqGkyeeAieaYkkAlkldPdnaeayynLGlayykqG 42 
                   +  +ye++ ++++kA++++    +a+y+LG +y+k G
  EPX73060.1 473 HSANEEYEKSKTSFRKAIRINARHYNAWYGLGMVYLKTG 511
                 556789*******************************98 PP

  == domain 5  score: 6.9 bits;  conditional E-value: 0.0056
      TPR_11   3 ayyeqGkyeeAieaYkkAlkldPdn 27 
                 +y + G++++A  ++++A +++P+n
  EPX73060.1 506 VYLKTGRNDQADFHFQRAAEINPNN 530
                 58999*******************9 PP

  == domain 6  score: 8.6 bits;  conditional E-value: 0.0017
      TPR_11   8 GkyeeAieaYkkAlkldPdnaeayynLGlay 38 
                  ++e+A+e Y kA++ld ++  a ++ ++++
  EPX73060.1 545 KDFEKALEFYCKACELDDKSSLARFKKAKVL 575
                 589**************99999999888775 PP

  == domain 7  score: 9.8 bits;  conditional E-value: 0.00068
      TPR_11   9 kyeeAieaYkkAlkldPdnaeayynLGlayykqG 42 
                 +y+ A+ ++++   + Pd a++++ LG++y + G
  EPX73060.1 580 NYDRALIELERLKSIAPDEANVHFMLGKIYKQRG 613
                 68999999999999****************9865 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.2       8.6   7.7e+03      45      69 ..      35      59 ..      21      60 .. 0.67
   2 ?    3.0   0.0      0.14   1.2e+02      11      36 ..      73      98 ..      67     146 .. 0.55
   3 !    9.4   0.0    0.0014       1.3      40      75 ..     356     391 ..     331     393 .. 0.75
   4 ?    3.5   0.0     0.097        87      44      74 ..     428     458 ..     408     461 .. 0.70
   5 !   15.5   0.1   1.8e-05     0.016      15      74 ..     475     526 ..     465     529 .. 0.81
   6 !   17.1   0.1   5.6e-06     0.005       4      75 ..     498     561 ..     495     563 .. 0.88
   7 !    9.0   0.0    0.0018       1.6       9      68 ..     571     622 ..     564     624 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 8.6
      TPR_12 45 attlrnLgrlyralgryeeAlelle 69
                 ++l+ L+  +++  +y  A +ll+
  EPX73060.1 35 GESLYLLAYSHLLNLDYNIAFDLLN 59
                5566777777766667777766666 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.14
      TPR_12 11 avlrrlgrydeAlellekaleiarrl 36
                 v++ lgry + ++  e+++ ++++l
  EPX73060.1 73 KVCLILGRYKQGITSIETCRPQWKSL 98
                56666666666666666666666544 PP

  == domain 3  score: 9.4 bits;  conditional E-value: 0.0014
      TPR_12  40 dhpltattlrnLgrlyralgryeeAlelleealaia 75 
                 +h  t  +l  +g +y+++ +ye+A++ +++  +++
  EPX73060.1 356 EHRTTPFVLSKIGVTYFEMVNYEKAEDVFQKLRDLR 391
                 566677788899999999999999999999988876 PP

  == domain 4  score: 3.5 bits;  conditional E-value: 0.097
      TPR_12  44 tattlrnLgrlyralgryeeAlelleealai 74 
                   ++ + L+ +++++ ++ +Al+  ++ l++
  EPX73060.1 428 SPEAWCILANCFSLQREHSQALKCINRGLQL 458
                 4556667888888888888888888888776 PP

  == domain 5  score: 15.5 bits;  conditional E-value: 1.8e-05
      TPR_12  15 rlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealai 74 
                 + ++y+++ + ++ka++i        h++   + ++Lg++y+++gr ++A  ++++a +i
  EPX73060.1 475 ANEEYEKSKTSFRKAIRIN-----ARHYN---AWYGLGMVYLKTGRNDQADFHFQRAAEI 526
                 5678888888888888888.....56644...89999***9999******9999999988 PP

  == domain 6  score: 17.1 bits;  conditional E-value: 5.6e-06
      TPR_12   4 talnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealaia 75 
                 +a++ l++v+++ gr d+A  ++++a ei      p++   +     +g+++++ +++e+Ale++ +a +++
  EPX73060.1 498 NAWYGLGMVYLKTGRNDQADFHFQRAAEIN-----PNN---SVLISCIGMIFERCKDFEKALEFYCKACELD 561
                 57889*********************9999.....887...6677779999999999999999999999986 PP

  == domain 7  score: 9.0 bits;  conditional E-value: 0.0018
      TPR_12   9 laavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlell 68 
                  a vl  l +yd Al  le+   ia     pd   +a++ + Lg +y ++g+   A ++l
  EPX73060.1 571 KAKVLILLHNYDRALIELERLKSIA-----PD---EANVHFMLGKIYKQRGQKNMAMRHL 622
                 68899999*************9999.....87...8****************99998876 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0     0.082        74       1      25 [.      36      60 ..      36      62 .. 0.89
   2 !    9.0   0.0    0.0027       2.4       5      31 ..     366     392 ..     363     393 .. 0.89
   3 ?   -2.0   0.0       8.4   7.5e+03       6      22 ..     435     451 ..     434     454 .. 0.83
   4 ?   -0.5   0.0       2.8   2.5e+03      15      28 ..     478     491 ..     464     494 .. 0.79
   5 !   14.6   0.0   4.3e-05     0.038       2      32 ..     499     529 ..     498     530 .. 0.95
   6 ?   -0.9   0.0       3.9   3.5e+03       6      23 ..     537     554 ..     537     554 .. 0.86
   7 ?    4.8   0.0     0.059        53       2      32 ..     567     597 ..     566     598 .. 0.90
   8 ?    2.2   0.0       0.4   3.6e+02       3      23 ..     602     622 ..     600     626 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.082
                HHHHHHHHHHHH.HHHHHHHHHHHHH CS
       TPR_6  1 dAlyklalsyrk.lgdtdkAlealer 25
                ++ly+la+s++  l d+  A ++l+r
  EPX73060.1 36 ESLYLLAYSHLLnL-DYNIAFDLLNR 60
                68*********889.*9999998876 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0027
                 HHHHHHHHHHHHHHHHHHHHHHHHH-T CS
       TPR_6   5 klalsyrklgdtdkAlealerlikeYP 31 
                 k++  y+++ +++kA + +++l++  P
  EPX73060.1 366 KIGVTYFEMVNYEKAEDVFQKLRDLRP 392
                 89******55*************9888 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 8.4
                 HHHHHHHHHHHHHHHHH CS
       TPR_6   6 lalsyrklgdtdkAlea 22 
                 la ++  + ++++Al+ 
  EPX73060.1 435 LANCFSLQREHSQALKC 451
                 78999999999***986 PP

  == domain 4  score: -0.5 bits;  conditional E-value: 2.8
                 HHHHHHHHHHHHHH CS
       TPR_6  15 dtdkAlealerlik 28 
                 +++k+++ +++ i+
  EPX73060.1 478 EYEKSKTSFRKAIR 491
                 89999999999987 PP

  == domain 5  score: 14.6 bits;  conditional E-value: 4.3e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6   2 AlyklalsyrklgdtdkAlealerlikeYPd 32 
                 A y l++ y+k+g+ d+A   ++r  +  P+
  EPX73060.1 499 AWYGLGMVYLKTGRNDQADFHFQRAAEINPN 529
                 89*********99***************999 PP

  == domain 6  score: -0.9 bits;  conditional E-value: 3.9
                 HHHHHHH.HHHHHHHHHHH CS
       TPR_6   6 lalsyrk.lgdtdkAleal 23 
                 +++ +++   d +kAle +
  EPX73060.1 537 IGMIFERcK-DFEKALEFY 554
                 688999988.*****9987 PP

  == domain 7  score: 4.8 bits;  conditional E-value: 0.059
                 HHHHHHHHHHH.HHHHHHHHHHHHHHHHH-TT CS
       TPR_6   2 Alyklalsyrk.lgdtdkAlealerlikeYPd 32 
                 A +k a+ ++    ++d+Al  lerl +  Pd
  EPX73060.1 567 ARFKKAKVLILlH-NYDRALIELERLKSIAPD 597
                 7899999999956.*************99998 PP

  == domain 8  score: 2.2 bits;  conditional E-value: 0.4
                 HHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   3 lyklalsyrklgdtdkAleal 23 
                  ++l++ y++ g++  A++ l
  EPX73060.1 602 HFMLGKIYKQRGQKNMAMRHL 622
                 69********88*99998765 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0      0.19   1.7e+02       7      29 ..     371     393 ..     366     408 .. 0.82
   2 ?    2.2   0.0      0.33   2.9e+02      24      63 ..     422     458 ..     417     461 .. 0.75
   3 !   21.7   0.0   2.7e-07   0.00024       3      66 ..     469     529 ..     467     531 .. 0.87
   4 ?    3.2   0.0      0.16   1.5e+02      10      48 ..     578     613 ..     545     615 .. 0.75

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.19
      TPR_16   7 alragdyddAaaaleaalkrdps 29 
                 +++  +y++A+ +++ +++++ps
  EPX73060.1 371 YFEMVNYEKAEDVFQKLRDLRPS 393
                 66777999*******99999943 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.33
      TPR_16  24 lkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalra 63 
                 l+ +p sP+   A+  l++++  q ++  A+  +++ l+ 
  EPX73060.1 422 LETNPYSPE---AWCILANCFSLQREHSQALKCINRGLQL 458
                 556755555...**************99998766665555 PP

  == domain 3  score: 21.7 bits;  conditional E-value: 2.7e-07
      TPR_16   3 laraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalraapd 66 
                 +++++ ++ +y++    ++ a++ +    +++ A+++lg ++l+ gr + A   +++a++  p+
  EPX73060.1 469 QGHEHSANEEYEKSKTSFRKAIRIN---ARHYNAWYGLGMVYLKTGRNDQADFHFQRAAEINPN 529
                 89999********************...*******************99886555555566665 PP

  == domain 4  score: 3.2 bits;  conditional E-value: 0.16
      TPR_16  10 agdyddAaaaleaalkrdpssPdaaeAllllgdaalrqg 48 
                 + +yd+A+  le++   +   Pd a  ++ lg ++ ++g
  EPX73060.1 578 LHNYDRALIELERLKSIA---PDEANVHFMLGKIYKQRG 613
                 567777777777777777...888888888888887776 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0      0.45   4.1e+02       4      25 ..     120     141 ..     118     146 .. 0.86
   2 !    7.8   0.0    0.0043       3.8       2      24 ..     364     386 ..     363     396 .. 0.84
   3 !    6.6   0.0    0.0099       8.9       1      32 [.     431     460 ..     431     463 .. 0.85
   4 ?   -2.7   0.0       9.6   8.6e+03      10      28 ..     474     490 ..     473     494 .. 0.72
   5 ?    2.6   0.0      0.19   1.7e+02       1      25 [.     499     523 ..     499     531 .. 0.81
   6 ?    5.5   0.0     0.022        20       6      22 ..     538     554 ..     537     566 .. 0.86
   7 ?   -0.3   0.0       1.6   1.4e+03       3      22 ..     603     622 ..     601     625 .. 0.80

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.45
       TPR_7   4 nLarlysrlGdyeeAielyeqs 25 
                  L+ +y + G+ ++A e++ +s
  EPX73060.1 120 VLGLMYKKAGYIKKATECFVES 141
                 5999**************9775 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0043
       TPR_7   2 LlnLarlysrlGdyeeAielyeq 24 
                 L+ ++++y+++ +ye+A++++++
  EPX73060.1 364 LSKIGVTYFEMVNYEKAEDVFQK 386
                 6789*****************99 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.0099
       TPR_7   1 aLlnLarlysrlGdyeeAielyeqsLaltkdp 32 
                 a++ La+++s ++++++A+++  +  +l  dp
  EPX73060.1 431 AWCILANCFSLQREHSQALKCINR--GLQLDP 460
                 6899****************9988..666555 PP

  == domain 4  score: -2.7 bits;  conditional E-value: 9.6
       TPR_7  10 srlGdyeeAielyeqsLal 28 
                 s+  +ye+  + +++  a+
  EPX73060.1 474 SANEEYEKSKTSFRK--AI 490
                 556789998888888..44 PP

  == domain 5  score: 2.6 bits;  conditional E-value: 0.19
       TPR_7   1 aLlnLarlysrlGdyeeAielyeqs 25 
                 a++ L+ +y + G+ ++A  +++++
  EPX73060.1 499 AWYGLGMVYLKTGRNDQADFHFQRA 523
                 67889*************8777774 PP

  == domain 6  score: 5.5 bits;  conditional E-value: 0.022
       TPR_7   6 arlysrlGdyeeAiely 22 
                 + +++r+ d+e+A+e+y
  EPX73060.1 538 GMIFERCKDFEKALEFY 554
                 7799************9 PP

  == domain 7  score: -0.3 bits;  conditional E-value: 1.6
       TPR_7   3 lnLarlysrlGdyeeAiely 22 
                 + L+ +y ++G+   A +++
  EPX73060.1 603 FMLGKIYKQRGQKNMAMRHL 622
                 679*******9988877665 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.031        28       8      26 ..     442     460 ..     435     466 .. 0.87
   2 ?    6.5   0.0      0.01       9.2      22      62 ..     490     530 ..     473     533 .. 0.90
   3 !   11.2   0.0   0.00034      0.31       9      55 ..     579     625 ..     572     635 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.031
       TPR_9   8 eedweralavverllllaP 26 
                 ++++++al++++r l+l+P
  EPX73060.1 442 QREHSQALKCINRGLQLDP 460
                 678999************9 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.01
       TPR_9  22 lllaPddpeerrdRGlllaqlGclsaAladLeaylalapda 62 
                 + ++ ++   ++  G+++ + G+  +A + ++++++++p++
  EPX73060.1 490 IRINARHYNAWYGLGMVYLKTGRNDQADFHFQRAAEINPNN 530
                 56788999*****************************9975 PP

  == domain 3  score: 11.2 bits;  conditional E-value: 0.00034
       TPR_9   9 edweralavverllllaPddpeerrdRGlllaqlGclsaAladLeay 55 
                 ++++ral  +erl  +aPd++  ++  G ++ q+G+ + A++ L  +
  EPX73060.1 579 HNYDRALIELERLKSIAPDEANVHFMLGKIYKQRGQKNMAMRHLTIA 625
                 6799************************************9998755 PP

>> TPR_15  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       1.2   1.1e+03     187     213 ..       9      35 ..       6      65 .. 0.55
   2 ?   -3.2   0.0       4.2   3.8e+03     144     179 ..     113     148 ..      95     156 .. 0.76
   3 ?    4.4   0.0      0.02        18     144     182 ..     427     462 ..     405     530 .. 0.61
   4 !    7.2   0.0    0.0029       2.6     128     185 ..     583     638 ..     562     643 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 1.2
      TPR_15 187 lWlliDlgrraeLrellkawkaraesd 213
                 +W++iD ++++++  + ++++a ++s 
  EPX73060.1   9 VWYSIDNQQYKNAIFYAERLHAVEDSG 35 
                 666666666665444444444433333 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 4.2
      TPR_15 144 qsaafllaraelyrqegqtdaAlrdyreAlalapds 179
                 + + +l +++ +y+++g  ++A +++ e ++ +p +
  EPX73060.1 113 DASSMLDVLGLMYKKAGYIKKATECFVESISINPYN 148
                 566788899999999999999999999988888866 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.02
      TPR_15 144 qsaafllaraelyrqegqtdaAlrdyreAlalapdssel 182
                  s+  + ++a+  + + ++ +Al+++ ++l+l+p+   +
  EPX73060.1 427 YSPEAWCILANCFSLQREHSQALKCINRGLQLDPT---F 462
                 57888999999999999999999999999999997...3 PP

  == domain 4  score: 7.2 bits;  conditional E-value: 0.0029
      TPR_15 128 riaellksleeeea.aeqsaafllaraelyrqegqtdaAlrdyreAlalapdsselraa 185
                 r    l +le+++  a ++a + ++++++y+q+gq++ A+r +  A +l+++ + ++++
  EPX73060.1 583 RA---LIELERLKSiAPDEANVHFMLGKIYKQRGQKNMAMRHLTIAWNLDGKANHIIKE 638
                 33...3344544443779**************************999999998888776 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.58   5.2e+02       5      31 ..     118     144 ..     116     145 .. 0.89
   2 ?    0.9   0.0      0.51   4.5e+02       5      27 ..     364     386 ..     363     391 .. 0.86
   3 ?   -2.6   0.0       6.5   5.8e+03      12      34 ..     473     495 ..     470     498 .. 0.76
   4 ?    3.2   0.0     0.094        84       8      30 ..     503     525 ..     502     527 .. 0.83
   5 ?    0.5   0.0      0.66     6e+02      23      37 ..     545     559 ..     542     562 .. 0.83
   6 ?    1.5   0.0      0.33     3e+02       8      24 ..     605     621 ..     604     623 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.58
      TPR_10   5 lnNLanalrqrgrydeAealleealai 31 
                 l  L+ ++ + g  ++A + + e+++i
  EPX73060.1 118 LDVLGLMYKKAGYIKKATECFVESISI 144
                 678****************99999987 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.51
      TPR_10   5 lnNLanalrqrgrydeAeallee 27 
                 l+ ++++++++ +y++Ae+ +++
  EPX73060.1 364 LSKIGVTYFEMVNYEKAEDVFQK 386
                 6779**************98876 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 6.5
      TPR_10  12 lrqrgrydeAealleealairrr 34 
                 +++  +y+++   +++a++i  r
  EPX73060.1 473 HSANEEYEKSKTSFRKAIRINAR 495
                 56777888888889999998666 PP

  == domain 4  score: 3.2 bits;  conditional E-value: 0.094
      TPR_10   8 LanalrqrgrydeAealleeala 30 
                 L++++ ++gr d+A  ++++a +
  EPX73060.1 503 LGMVYLKTGRNDQADFHFQRAAE 525
                 9************9766666665 PP

  == domain 5  score: 0.5 bits;  conditional E-value: 0.66
      TPR_10  23 alleealairrrllG 37 
                 +++e+al+ + ++++
  EPX73060.1 545 KDFEKALEFYCKACE 559
                 689*******99986 PP

  == domain 6  score: 1.5 bits;  conditional E-value: 0.33
      TPR_10   8 LanalrqrgrydeAeal 24 
                 L+ ++ qrg+ + A+++
  EPX73060.1 605 LGKIYKQRGQKNMAMRH 621
                 999********999886 PP

>> Mad3_BUB1_I_2  Putative Mad3/BUB1 like region 1 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0       1.6   1.4e+03      55      85 ..     519     549 ..     488     577 .. 0.51
   2 ?   12.6   0.1   0.00013      0.11      28      99 ..     581     652 ..     575     662 .. 0.89

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 1.6
  Mad3_BUB1_I_2  55 yFlkkgkkeaalfiLqegiknkvydkeilke 85 
                    +F++  + +  + +L   i +   + +  ++
     EPX73060.1 519 HFQRAAEINPNNSVLISCIGMIFERCKDFEK 549
                    4444444444444444444444444444444 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 0.00013
  Mad3_BUB1_I_2  28 kdlkilfLmklKkIskfyyfvYlelsryFlkkgkkeaalfiLqegiknkvydkeilkeelksikklekklse 99 
                     d  ++ L +lK+I+ + + v   l + +++ g+k++a+  L+ + + +   ++i+ke+++++  le++l +
     EPX73060.1 581 YDRALIELERLKSIAPDEANVHFMLGKIYKQRGQKNMAMRHLTIAWNLDGKANHIIKESIENLDILEENLLT 652
                    57789999******************************************************9999887654 PP

>> DUF4810  Domain of unknown function (DUF4810)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0       1.3   1.2e+03      51      69 ..     121     139 ..     101     146 .. 0.90
   2 ?   -0.1   0.0       1.5   1.4e+03      42      70 ..     358     386 ..     351     393 .. 0.85
   3 ?    8.7   0.0    0.0029       2.6      51      82 ..     503     534 ..     462     537 .. 0.75
   4 ?   -1.4   0.0       4.1   3.7e+03      50      68 ..     604     622 ..     597     624 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 1.3
     DUF4810  51 lGllylkegkkeeaieafe 69 
                 lGl+y k+g  ++a e f 
  EPX73060.1 121 LGLMYKKAGYIKKATECFV 139
                 8*************99985 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 1.5
     DUF4810  42 kvpPGlyAelGllylkegkkeeaieafek 70 
                 +  P +  ++G+ y+++ + e+a + f+k
  EPX73060.1 358 RTTPFVLSKIGVTYFEMVNYEKAEDVFQK 386
                 5677888999***************9997 PP

  == domain 3  score: 8.7 bits;  conditional E-value: 0.0029
     DUF4810  51 lGllylkegkkeeaieafekEkelfPESatfm 82 
                 lG++ylk+g++++a  +f++  e  P  ++++
  EPX73060.1 503 LGMVYLKTGRNDQADFHFQRAAEINPNNSVLI 534
                 89*****************9888877766665 PP

  == domain 4  score: -1.4 bits;  conditional E-value: 4.1
     DUF4810  50 elGllylkegkkeeaieaf 68 
                  lG +y ++g+k+ a++++
  EPX73060.1 604 MLGKIYKQRGQKNMAMRHL 622
                 6899********9999876 PP

>> ChAPs  ChAPs (Chs5p-Arf1p-binding proteins)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00033       0.3     190     287 ..     420     516 ..     394     523 .. 0.88
   2 ?    1.6   0.0      0.12   1.1e+02     193     289 ..     521     620 ..     510     625 .. 0.57

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00033
                 HHHHHHHTT-GGGHHHHHHHHHHTT-HHHHHHHHHHHH-SSS-HHHHHHHHHHHHHHSS--HHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHH CS
       ChAPs 190 ellekLkeeepevvillarvllladeEvdavkllneeleeeekdaelLllqaefllskkkeelAlevakravksaPsefktWalLvkvYikledienA 287
                 e+le  +  +pe+  +la  + l+ e  +a+k +n+ l+ +++     +lq +    ++++e  ++  ++a+++    ++ W+ L  vY+k +  ++A
  EPX73060.1 420 EMLET-NPYSPEAWCILANCFSLQREHSQALKCINRGLQLDPTFEYAYTLQGHEHSANEEYEKSKTSFRKAIRINARHYNAWYGLGMVYLKTGRNDQA 516
                 44433.34569****************************999998899999999999999999****************************9999887 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.12
                 HHHHTT-GGGHHHHHHHHHHTT-...HHHHHHHHHHHH-SSS-HHHHHHHHHHHHHHSS--HHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHHH CS
       ChAPs 193 ekLkeeepevvillarvlllade...EvdavkllneeleeeekdaelLllqaefllskkkeelAlevakravksaPsefktWalLvkvYikledienAL 288
                 ++ +e +p+ ++l++ + ++ ++     +a++   ++ e + k++     +a+ l+  ++++ Al   +r  ++aP e +  ++L k+Y + ++ + A+
  EPX73060.1 521 QRAAEINPNNSVLISCIGMIFERckdFEKALEFYCKACELDDKSSLARFKKAKVLILLHNYDRALIELERLKSIAPDEANVHFMLGKIYKQRGQKNMAM 619
                 455555555555555444443320002234444444444444444334456666777777777777777777888888888888888888888877776 PP

                 H CS
       ChAPs 289 l 289
                  
  EPX73060.1 620 R 620
                 5 PP

>> PPTA  Protein prenyltransferase alpha subunit repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.1      0.65   5.8e+02       9      19 ..     142     152 ..     140     155 .. 0.83
   2 ?    3.0   0.0       0.1        89       5      20 ..     418     433 ..     417     440 .. 0.84
   3 ?    6.5   0.2    0.0078         7       7      20 ..     488     501 ..     487     501 .. 0.93

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.65
                 HHH-TT-CHHH CS
        PPTA   9 iekdpkNYsaW 19 
                 i+ +p N+++ 
  EPX73060.1 142 ISINPYNFTCF 152
                 889*****986 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.1
                 HHHHHHH-TT-CHHHH CS
        PPTA   5 tekliekdpkNYsaWn 20 
                   +++e++p +  aW+
  EPX73060.1 418 AHEMLETNPYSPEAWC 433
                 579************7 PP

  == domain 3  score: 6.5 bits;  conditional E-value: 0.0078
                 HHHHH-TT-CHHHH CS
        PPTA   7 kliekdpkNYsaWn 20 
                 k+i+ ++++Y aW+
  EPX73060.1 488 KAIRINARHYNAWY 501
                 79***********7 PP

>> TPR_3  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.034        30       8      25 ..     368     385 ..     364     389 .. 0.84
   2 ?   -2.3   0.0       5.5   4.9e+03       4      12 ..     461     469 ..     458     469 .. 0.73
   3 ?   -1.0   0.0       2.2   1.9e+03       3      20 ..     499     516 ..     498     530 .. 0.77
   4 ?    3.6   0.2     0.074        66      15      35 ..     545     563 ..     544     563 .. 0.88

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.034
                 HHHHHHTT-HHHHHHH.. CS
       TPR_3   8 AaefynkkkyqeArelfs 25 
                 + +++ + +y++A+++f+
  EPX73060.1 368 GVTYFEMVNYEKAEDVFQ 385
                 56888999*********9 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 5.5
                 HHHHHHHHH CS
       TPR_3   4 lysyAaefy 12 
                  + yA++++
  EPX73060.1 461 TFEYAYTLQ 469
                 677999987 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 2.2
                 HHHHHHHHHHHTT-HHHH CS
       TPR_3   3 ylysyAaefynkkkyqeA 20 
                  +y+++ ++   ++ ++A
  EPX73060.1 499 AWYGLGMVYLKTGRNDQA 516
                 69****999888888887 PP

  == domain 4  score: 3.6 bits;  conditional E-value: 0.074
                 T-HHHHHHH..HHHHHHH-TT CS
       TPR_3  15 kkyqeArelfsYallaildke 35 
                 k++++A+e+  Y  ++ ld++
  EPX73060.1 545 KDFEKALEF--YCKACELDDK 563
                 89*******..8899999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (663 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       680  (0.0379274); expected 358.6 (0.02)
Passed bias filter:                      493  (0.0274974); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                        22  (0.00122706); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              20  [number of targets reported over threshold]
# CPU time: 0.77u 0.29s 00:00:01.06 Elapsed: 00:00:00.54
# Mc/sec: 3669.77
//
Query:       EPX73061.1  [L=281]
Description: 1-acylglycerol-3-phosphate O-acyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-31  109.3   0.0    1.5e-31  108.8   0.0    1.2  1  Acyltransferase  Acyltransferase
  ------ inclusion threshold ------
      0.059   13.8   0.0       0.12   12.8   0.0    1.4  1  Phage_holin_6_1  Bacteriophage holin of superfamily 6 (Holin_


Domain annotation for each model (and alignments):
>> Acyltransferase  Acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.8   0.0   1.7e-35   1.5e-31       2     134 ..      87     215 ..      86     216 .. 0.98

  Alignments for each domain:
  == domain 1  score: 108.8 bits;  conditional E-value: 1.7e-35
  Acyltransferase   2 vrvtglenlpekgpailvaNHqsylDvlllwlllyksngprnvviiakkellsipllgflmrllgfifidRksnaraagsleniselleegkl. 94 
                      +rv+++e l++++pa+lv NHqs+lD ll   ++     ++++ ii+kk+l++ipllg++m l++++f+dR  +++a +  ++++++++++kl 
       EPX73061.1  87 FRVENEEILRKNKPAVLVVNHQSELDLLLAGKVF-----QPKFSIISKKSLKYIPLLGWFMLLADAVFVDRARREDAIALFSRAAQRMKAEKLd 175
                      79********************************.....89***************************************************** PP

  Acyltransferase  95 vviFPEGtrsregel..lpfkkGlvrlaakakkgvpivPvai 134
                      +++F EGtr+ + e   lp kkG+++la++a  + pi+P+a+
       EPX73061.1 176 IWVFAEGTRTYAKEPllLPLKKGAFHLAVQA--QAPIIPIAV 215
                      ************99999**************..*******97 PP

>> Phage_holin_6_1  Bacteriophage holin of superfamily 6 (Holin_LLH)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   1.3e-05      0.12       6      74 ..     204     272 ..     200     277 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.3e-05
  Phage_holin_6_1   6 vsvlviiitivlgllvkkikkllklkkqgekakkiaeiaknaVkaveqvakedakgeeKkeeAleklke 74 
                      v+  + ii+i++   ++   +  k+  +ge+++ki++ + +a k  e+v +   + +eK+e A++++++
       EPX73061.1 204 VQAQAPIIPIAVQNYSHIFHPPTKVFNKGEALVKILDPIPTAGKTSEDVNSLLRETQEKMEAAMTEIND 272
                      67778899999999999999999****************************999***********9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (281 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       567  (0.0316247); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.32s 00:00:00.86 Elapsed: 00:00:00.50
# Mc/sec: 1702.49
//
Query:       EPX73062.1  [L=231]
Description: CK2 family regulatory subunit Ckb1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-82  275.2   0.0      3e-82  274.8   0.0    1.1  1  CK_II_beta  Casein kinase II regulatory subunit


Domain annotation for each model (and alignments):
>> CK_II_beta  Casein kinase II regulatory subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  274.8   0.0   1.7e-86     3e-82       2     182 .]      16     195 ..      15     195 .. 0.98

  Alignments for each domain:
  == domain 1  score: 274.8 bits;  conditional E-value: 1.7e-86
  CK_II_beta   2 WiswflslkgneyfvevdedfiedkfnltgLseevpnykealelildveeeeeleeseksevessaelLYgliHaryiltkkglakmlekykkkefgrC 100
                 W++wfl lkgne+f+evded+i+d+fnltgLs+evp+y++a++lildv + + l+e+ ++eve+sa++LYgliHaryilt++gl kmlekykk +fg+C
  EPX73062.1  16 WVDWFLGLKGNEFFCEVDEDYIQDRFNLTGLSQEVPQYSHAIDLILDVLDPD-LSEEIQDEVEASARHLYGLIHARYILTAQGLYKMLEKYKKCDFGHC 113
                 ***********************************************88866.9999****************************************** PP

  CK_II_beta 101 prvlCekqkvLPvGlsdkpgektvklyCpkCedvYspkssrsrsidGafFGttfphlllltypelepkkskekyepriyGfk 182
                 prvlC++q++LPvGlsd p++k+vklyC +CedvY+pks+r+ sidGa+FGt+fph+l+++ypel   ks+e+y pri+Gfk
  EPX73062.1 114 PRVLCNGQPMLPVGLSDIPHTKSVKLYCARCEDVYTPKSQRHASIDGAYFGTSFPHMLFQVYPELVVPKSHERYIPRIFGFK 195
                 *********************************************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       595  (0.0331865); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.30s 00:00:00.84 Elapsed: 00:00:00.49
# Mc/sec: 1423.43
//
Query:       EPX73063.1  [L=1014]
Description: guanyl-nucleotide exchange factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-31  108.6   0.4    5.9e-31  107.8   0.4    1.5  1  RIC1      RIC1
  ------ inclusion threshold ------
      0.013   15.9   0.2      0.097   13.2   0.1    2.6  2  PQQ_3     PQQ-like domain
      0.095   12.3   0.0        0.5    9.9   0.0    2.0  2  SGL       SMP-30/Gluconolactonase/LRE-like region


Domain annotation for each model (and alignments):
>> RIC1  RIC1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.8   0.4   9.9e-35   5.9e-31      35     250 ..     772     979 ..     674     981 .. 0.85

  Alignments for each domain:
  == domain 1  score: 107.8 bits;  conditional E-value: 9.9e-35
        RIC1  35 esvripldfypLsvlldkgiilGvesevslrrslsfalfrletktqlfLhhvLrqlLernlleeAlelassyqklsyFahaLElLLhevLeeeadakep 133
                 +s++++   + Lsv+++ g++++++   + +   s+ + +++++   fL+++L++lL  n+++ A+ l ++y++l y   +LE LL   +e + +    
  EPX73063.1 772 HSISLNNPGTLLSVIVKGGLFISASTLEHKNAANSMEYSHIQIEVFPFLPDLLKSLLLLNDIDYAVFLVRAYASLRYIDFVLERLLSMAVECSDS---- 866
                 344444467899*************999999999****************************************************999987533.... PP

        RIC1 134 sdaseeeealLpavvefldefpe..yldvvvqCaRKtevarWrtLfdvlgsPkeLFeecleleklktAasyLlvLqnleeleessqdavrLLklaleek 230
                       ++alL +vv + ++ +   +++ v++C+RK+e ++W+++f++ g+P+ L+++cl ++++k Aa ++++ q    ++++ +  +++Lkl+  ++
  EPX73063.1 867 ------DQALLTNVVILFSKIKDlnVYKYVLGCLRKVETHYWPNIFNHFGDPQYLMNQCLGNDDIKSAARCIIIWQVHHGSASCADVFLEVLKLSFVKE 959
                 ......3479********99995459************************************************************************* PP

        RIC1 231 dwelckdLlRFlaaidesge 250
                 +we+c +L+ +la++d++++
  EPX73063.1 960 NWEVCMELCHYLASLDPTKQ 979
                 *****************986 PP

>> PQQ_3  PQQ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       1.4   8.6e+03      28      35 ..     207     214 ..     206     214 .. 0.77
   2 ?   13.2   0.1   1.6e-05     0.097      23      39 ..     257     273 ..     237     274 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1.4
       PQQ_3  28 tgdGtlyA 35 
                 ++dG++yA
  EPX73063.1 207 SSDGRVYA 214
                 56899987 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 1.6e-05
       PQQ_3  23 lvyvgtgdGtlyAlDae 39 
                 l+yvgt dGtlyA++ +
  EPX73063.1 257 LLYVGTCDGTLYAYEIQ 273
                 8*************976 PP

>> SGL  SMP-30/Gluconolactonase/LRE-like region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0   8.4e-05       0.5      51     127 ..     301     372 ..     239     409 .. 0.67
   2 ?   -0.9   0.0      0.16   9.7e+02      38      75 ..     455     491 ..     440     499 .. 0.76

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 8.4e-05
         SGL  51 dgrlvvasksglalldlasgeletladeee....dekpllrfNDgvvdpdGrlwfGtmgdeeakgeevgalyrldpdgkle 127
                 ++++ v + ++ a +     ++++++++++    +e  +  fNDg  ++dG+ +fG ++   ++++     + ++++++l+
  EPX73063.1 301 GDGFQVMVGYDTAWI-----SYSPYLHPCSssddSEFFKYGFNDGFWERDGSAFFGLKNLPMKQQK----TISVETKKSLH 372
                 244444444444444.....445555554433337778899*******************999887....44455544454 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.16
         SGL  38 dtpesvGaiaprkdgrlvvasksglalldlasgeletl 75 
                 + p + +ai + +++ + +a ++g+a+++++++ ++++
  EPX73063.1 455 EWPIRYTAISK-DGEYIAIAGSHGFAVYNFQNRIWNVF 491
                 44447777777.77888899999*****9999988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1014 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       427  (0.0238162); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.80u 0.32s 00:00:01.12 Elapsed: 00:00:00.52
# Mc/sec: 5836.41
//
Query:       EPX73064.1  [L=681]
Description: GRIP domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.9e-09   36.7   1.0    7.1e-09   35.4   1.0    1.8  1  GRIP       GRIP domain
    0.00078   18.4  18.2    0.00078   18.4  18.2    5.3  5  Spc7       Spc7 kinetochore protein
  ------ inclusion threshold ------
       0.17   11.2   1.1          1    8.6   1.1    2.4  1  LCIB_C_CA  Limiting CO2-inducible proteins B/C beta carbonyic


Domain annotation for each model (and alignments):
>> GRIP  GRIP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.4   1.0   1.2e-12   7.1e-09       2      44 .]     636     676 ..     635     676 .. 0.95

  Alignments for each domain:
  == domain 1  score: 35.4 bits;  conditional E-value: 1.2e-12
        GRIP   2 anleYLKNVllqFLeskeaserkqLvpVlstlLkfspeEeqkl 44 
                 ++ eY +N+l+qFLe++e   r  +v+ ls lL++s e++++l
  EPX73064.1 636 IDKEYTRNILFQFLEQRE--RRADIVNLLSILLELSTEQKEQL 676
                 689***************..*******************9875 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.1   5.8    0.0059        35     169     225 ..      17      74 ..       2      78 .. 0.70
   2 ?   -2.6  15.7      0.33     2e+03     136     282 ..      89     248 ..      86     267 .. 0.63
   3 !    5.0  11.0    0.0016       9.5     172     254 ..     282     364 ..     277     365 .. 0.68
   4 !   18.4  18.2   1.3e-07   0.00078     145     279 ..     343     473 ..     340     479 .. 0.88
   5 !    2.4  16.8    0.0095        57     163     249 ..     509     596 ..     472     612 .. 0.68

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.0059
        Spc7 169 lpeleeekaeleeeleklqe.aaeelesidkeeLeelreelaelkaeieekkkelael 225
                  +e ++++ +l+e +++    ++ +l + d+eeL+ l+ elael ++i+++++ l+e+
  EPX73064.1  17 QEEAKNRRRQLQEMHNQNSGsKESSLGKDDSEELALLQIELAELRETIDRFQTALQEK 74 
                 344455555555444443334556677799**********************999987 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.33
        Spc7 136 llegLkegleenlegleedkelLekqeeeldellpeleeekaeleeeleklqeaaeeles..idkeeLeelreelael..kaeieekkkel.aelqeql 229
                  l++L++++e  + ++++ +++L++  +++++ ++e+ee+++elee++ ++ ++  + ++  +d   + ++ e ++ +    ++e+k + l  e ++  
  EPX73064.1  89 YLDNLEQRYEISIREVKRLSNELQEADALFKASKKEFEEKFKELEEKFSSEVARLSSENQirSDDRTISNIEEYISLVpsTPTVESKTESLcPEITTTS 187
                 578999999999999999999999999999*****************9999995554444446677788887766544113445555444324566666 PP

        Spc7 230 eeleekieelkeqkseleeei.......aeaervleeckgwsesevs.rlkeevkaleelt 282
                 +++++k ++ k++k+++e+ +       +e  ++le   + +++ v+ +++++++a+e  +
  EPX73064.1 188 NKSSSKKKKRKNKKNQAEKHVgqnieptQEGSSILEPSTENTSEKVKeNVQKKLSAFETSL 248
                 6666666666666666665541111111334445555555555555413455555555555 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.0016
        Spc7 172 leeekaeleeeleklqe.aaeelesid.keeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeae 254
                 le + +  ++ele+ ++  ++e ++ d +++++  ++++ +l+  i++++k+l+e  ++l + e++ e+l+e+k++l e++a++e
  EPX73064.1 282 LELKLEPFRRELETAEQnLKKESANFDkQDQIH--KDNILKLNLSIDSLQKKLEESHQNLVWAETSCESLREEKQTLTERLANSE 364
                 455555555666554443455556666455554..78888888888888888888888888888888888888888888888766 PP

  == domain 4  score: 18.4 bits;  conditional E-value: 1.3e-07
        Spc7 145 eenlegleedkelLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqk 243
                 e   e+l+e+k++L+++ ++ ++ + +l+e ++++++ l+  qe  +     ++eeLe++  ++++ + e++ +k+e+++ +++  el++k+  ++eq 
  EPX73064.1 343 ETSCESLREEKQTLTERLANSEDGKIKLNESFSRVQRSLDLSQENLRR----TSEELEKANGTIEKMDREVDMLKREIEKNKTRTGELNKKLVFATEQS 437
                 567899*************************************97766....799******************************************** PP

        Spc7 244 seleeeiaeaervleeckgwsesevsr.lkeevkale 279
                 +e+  ++ e ++ ++ +k+ + +ev + l+++ k+ +
  EPX73064.1 438 NEFSRQVYETKEAIQ-TKQQEFEEVYKlLMDQTKDCQ 473
                 *******99999988.555666777651455555555 PP

  == domain 5  score: 2.4 bits;  conditional E-value: 0.0095
        Spc7 163 eeldellpeleeekaeleeeleklqeaaeelesidkeeLeelre.elaelkaeieekkkelaelqeqleeleekieelkeqkseleee 249
                 +e d++l ele+ek+   +ele+l+++ eel+  ++e L+ +++ + ++++++ +e ++ l++l++++++l+ +++e ++++++l++ 
  EPX73064.1 509 HEKDSALSELEKEKQIAFSELEHLKSKDEELTRQNQELLNGVQSvQTDKVDSNNHENEETLKTLEAEKKSLAIALDESTARYEHLQKS 596
                 3445666677777777777777777777777777777777776535666777777777777777777777777777777777777664 PP

>> LCIB_C_CA  Limiting CO2-inducible proteins B/C beta carbonyic anhydrases
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   1.1   0.00017         1     123     178 ..     389     443 ..     379     466 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00017
                 H---------------TTTHHHHHHHHHHGGGHHHHHH-SSHHHHHHHHHHHHHHH CS
   LCIB_C_CA 123 kkeglekeskepgaldelDaeqsiikqrllkrleeiekaeddlveltkvayeaikd 178
                 +++  e+ +k++g+++++D e++++k+++ k++++  + +++lv +t++  e  ++
  EPX73064.1 389 RRT-SEELEKANGTIEKMDREVDMLKREIEKNKTRTGELNKKLVFATEQSNEFSRQ 443
                 444.3444557799*********************************998887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (681 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3565  (0.19884); expected 358.6 (0.02)
Passed bias filter:                      585  (0.0326287); expected 358.6 (0.02)
Passed Vit filter:                       124  (0.00691617); expected 17.9 (0.001)
Passed Fwd filter:                        63  (0.00351386); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.91u 0.37s 00:00:02.27 Elapsed: 00:00:00.65
# Mc/sec: 3137.27
//
Query:       EPX73065.1  [L=748]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.6e-52  173.2   0.7    1.9e-51  172.2   0.7    1.5  1  RRM_2     RNA recognition motif 2
    7.8e-17   60.9   0.0    2.4e-07   30.5   0.0    3.5  3  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
  ------ inclusion threshold ------
      0.078   13.2   0.1       0.24   11.6   0.1    1.8  1  BRAP2     BRCA1-associated protein 2


Domain annotation for each model (and alignments):
>> RRM_2  RNA recognition motif 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  172.2   0.7   3.1e-55   1.9e-51       1      97 []     594     690 ..     594     690 .. 0.99

  Alignments for each domain:
  == domain 1  score: 172.2 bits;  conditional E-value: 3.1e-55
       RRM_2   1 rttlliknipnkytkkmllaaideknkgtydflylpidfknkcnvgyafinlvepkkivafqkafngkkwekfnsekvaslayariqgkaaliaklq 97 
                 rtt++iknipnk+t++ml+++id +n+gtydflyl+idf+nkcnvgyafin++ep+ iv+f ka++g++w++f+sek+++++ya+iqgk++li+k++
  EPX73065.1 594 RTTVMIKNIPNKFTQQMLREYIDLTNQGTYDFLYLRIDFVNKCNVGYAFINFIEPEAIVTFGKARVGTQWNVFHSEKICDISYANIQGKERLIEKFR 690
                 8**********************************************************************************************96 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.5   0.0     4e-11   2.4e-07       1      65 [.     194     255 ..     194     260 .. 0.89
   2 !   14.9   0.0   2.8e-06     0.017      13      69 ..     303     356 ..     299     357 .. 0.90
   3 !   11.2   0.1   4.1e-05      0.25       1      50 [.     597     649 ..     597     653 .. 0.90

  Alignments for each domain:
  == domain 1  score: 30.5 bits;  conditional E-value: 4e-11
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEET CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklg 65 
                 lf++nLp+ v   +L elFs fG++k ++ +     +++g+++V F + ++A +  + l  + + 
  EPX73065.1 194 LFISNLPRIVPYATLLELFSRFGDVKGLDTSAL---STDGICIVAFFDVRQAIQTAKILRTQRFF 255
                 8*******************************8...****************9877777775444 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 2.8e-06
                 HHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1  13 eeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 ++L  +++ fGp   +k  r   g++     +eF + +dA  Al++l+g+ ++++ l
  EPX73065.1 303 QQLQSILQTFGPLLCLKPLR---GQNPSQILCEFYDTRDASFALDELDGRIIHNCCL 356
                 7899999******7777777...7*****************************9987 PP

  == domain 3  score: 11.2 bits;  conditional E-value: 4.1e-05
                 EEEESETTTSSHHHHHHHH..HTTSCEEEEEEEEE.TTTSEEEEEEEEESSHH CS
       RRM_1   1 lfVgnLppdvteeeLkelF..skfGpiksiklvrd.etgkskgfafVeFeske 50 
                 ++++n+p+  t+++L+e+    + G +  + l  d  ++ + g+af++F  +e
  EPX73065.1 597 VMIKNIPNKFTQQMLREYIdlTNQGTYDFLYLRIDfVNKCNVGYAFINFIEPE 649
                 78****************622679***9999******************8887 PP

>> BRAP2  BRCA1-associated protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1     4e-05      0.24       7      86 ..     594     677 ..     590     685 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 4e-05
       BRAP2   7 stllcilavPsylsladllkFvgsvlekvseiriir.dgken..rymvLikfkdqesadeFykefngkkFssleee.vChvvfv 86 
                  t+++i  +P++++ + l ++++ +++ + ++  +r d  ++     + i+f + e+  +F k+  g +++ + +e +C + + 
  EPX73065.1 594 RTTVMIKNIPNKFTQQMLREYIDLTNQGTYDFLYLRiDFVNKcnVGYAFINFIEPEAIVTFGKARVGTQWNVFHSEkICDISYA 677
                 6899********************************6654432245679**********************9986527999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (748 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       388  (0.0216409); expected 358.6 (0.02)
Passed bias filter:                      315  (0.0175693); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.63u 0.27s 00:00:00.90 Elapsed: 00:00:00.45
# Mc/sec: 4999.62
//
Query:       EPX73066.1  [L=97]
Description: 4-alpha-hydroxytetrahydrobiopterin dehydratase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.8e-29  100.1   0.1    6.7e-29   99.9   0.1    1.0  1  Pterin_4a  Pterin 4 alpha carbinolamine dehydratase


Domain annotation for each model (and alignments):
>> Pterin_4a  Pterin 4 alpha carbinolamine dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.9   0.1   3.7e-33   6.7e-29       8      91 .]       8      93 ..       4      93 .. 0.90

  Alignments for each domain:
  == domain 1  score: 99.9 bits;  conditional E-value: 3.7e-33
   Pterin_4a  8 iqkll.aelpgWr.leeaeelerefkfkdfeeaiafvnrvaalaeeenHhpdilvsynkvtvrltThdaggltenDfklAakidel 91
                i++l+ ++ + W+ l++ ++l+r+f+fk+f ea++f++ va  a+++nHhp+++++ynkv+++ltTh  ++lte+D+klA+ id++
  EPX73066.1  8 ISALVsKPTNSWNlLGDSTKLQRTFQFKNFIEAFGFMTCVALRAQQMNHHPEWSNVYNKVDITLTTHMTKSLTEKDVKLAEFIDTI 93
                55555234479**8448889***************************************************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       638  (0.0355848); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.28s 00:00:00.69 Elapsed: 00:00:00.44
# Mc/sec: 661.54
//
Query:       EPX73067.1  [L=107]
Description: anaphase-promoting complex subunit Apc14 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       626  (0.0349155); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.30s 00:00:00.73 Elapsed: 00:00:00.46
# Mc/sec: 705.09
//
Query:       EPX73068.1  [L=135]
Description: Sm snRNP core protein Smd1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-19   68.9   0.7    3.1e-19   68.4   0.7    1.2  1  LSM       LSM domain
  ------ inclusion threshold ------
      0.041   14.0   0.1      0.062   13.5   0.1    1.3  1  SM-ATX    Ataxin 2 SM domain
      0.057   13.3   0.1      0.084   12.8   0.1    1.2  1  Gemin7    Gem-associated protein 7 (Gemin7)
       0.14   10.4   0.0       0.16   10.2   0.0    1.0  1  CATSPERD  Cation channel sperm-associated protein subunit del
       0.37    9.6   1.5       0.49    9.1   1.5    1.1  1  API5      Apoptosis inhibitory protein 5 (API5)


Domain annotation for each model (and alignments):
>> LSM  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.4   0.7   8.6e-23   3.1e-19       1      66 [.      22      86 ..      22      87 .. 0.97

  Alignments for each domain:
  == domain 1  score: 68.4 bits;  conditional E-value: 8.6e-23
                HHHHHTTTSEEEEEETTSEEEEEEEEEEETTSEEEEEEEEEEETTETEEEEEEEEEEEGGGEEEEE CS
         LSM  1 kflkklinkkvtvelkngrelrGtLkgfDqfmNlvLedveetlkdkkekrklglvliRGnnivlis 66
                +fl kl+n++v +elkng+ l Gt++++D +mN +L+ v++t+k+  e   l+++ iRGnni++ +
  EPX73068.1 22 RFLMKLTNETVSIELKNGTILNGTITAVDMQMNTHLKTVKMTVKGR-EPVPLETLSIRGNNIRYYI 86
                59*****************************************999.****************986 PP

>> SM-ATX  Ataxin 2 SM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.1   1.7e-05     0.062       3      51 ..      19      65 ..      17      83 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.7e-05
                X-HHHHHTTTTSEEEEEETTS-EEEEEEEEE-T..T--EEEEEEEETTS CS
      SM-ATX  3 rllflltslvGkevevtvknGevyeGifstvslekdfsvvLkmarkvkk 51
                +l+ +l++l  ++v++++knG +  G  ++v++  +++  Lk ++ + k
  EPX73068.1 19 KLVRFLMKLTNETVSIELKNGTILNGTITAVDM--QMNTHLKTVKMTVK 65
                577788999999*********************..*******9999877 PP

>> Gemin7  Gem-associated protein 7 (Gemin7)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   2.3e-05     0.084      10      47 ..      17      54 ..      14      60 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2.3e-05
      Gemin7 10 RerfLrslkalvgkpveftllektevsaefkgvdidee 47
                +++  r+l +l+++ v ++l + t +++++ +vd++++
  EPX73068.1 17 KMKLVRFLMKLTNETVSIELKNGTILNGTITAVDMQMN 54
                78999*****************************9875 PP

>> CATSPERD  Cation channel sperm-associated protein subunit delta
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   4.6e-05      0.16     341     390 ..      26      76 ..       3      82 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 4.6e-05
    CATSPERD 341 elqvdkckvellqgefek.kmytidmnskleltalliPrpgtspvPlvmvs 390
                 +l+ ++  +el +g++ + ++ ++dm+ + +l+++ +  +g++pvPl ++s
  EPX73068.1  26 KLTNETVSIELKNGTILNgTITAVDMQMNTHLKTVKMTVKGREPVPLETLS 76 
                 67778899999999976626778************************9887 PP

>> API5  Apoptosis inhibitory protein 5 (API5)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   1.5   0.00014      0.49     495     519 .]     105     130 ..      88     132 .. 0.58

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00014
        API5 495 ssgkgrgsgsrgrgrg.gggrGrGrG 519
                 ++ k++    rgrgrg g+grGrGrG
  EPX73068.1 105 KQKKKEADRGRGRGRGrGRGRGRGRG 130
                 33334444445555534556666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       489  (0.0272742); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1014.71
//
Query:       EPX73069.1  [L=341]
Description: electron transfer flavoprotein alpha subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.7e-41  139.6   1.0    1.5e-40  139.0   1.0    1.3  1  ETF        Electron transfer flavoprotein domain
    1.3e-30  105.2   0.1    2.7e-30  104.2   0.1    1.5  1  ETF_alpha  Electron transfer flavoprotein FAD-binding domain


Domain annotation for each model (and alignments):
>> ETF  Electron transfer flavoprotein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.0   1.0   1.7e-44   1.5e-40       1     175 [.      30     196 ..      30     202 .. 0.95

  Alignments for each domain:
  == domain 1  score: 139.0 bits;  conditional E-value: 1.7e-44
                 EEEEE-EC.CCCE-HHHHHHHHHHHHHHHHHT--EEEEEEES....S-CHHHHHHCT-SEEEEEE-GGGSS--CCHHHHHHHHHHHHC--SEEEEESSC CS
         ETF   1 vlvlaehgvdgklnpvdlealeaArrlkekaggevtavvvGppeaeealrealaamGadkvilvddpalagydaeatakalaalikkedpdlvlagata 99 
                 vl l eh+ dgk +p++l+a+eaA+r+    gg+v a+vvGp++++ a ++     G+++vi+v++ a++ y+++++ak+l + +kk d+++++ ++++
  EPX73069.1  30 VLALLEHQ-DGKSKPASLSAIEAAKRT----GGDVFAFVVGPNASQIAQQASKTVDGLKQVIHVENNAYDRYLPDQIAKILYENAKKFDASHIFSAHST 123
                 57899**7.******************....9**********99999977766779******************************************* PP

                 CHHHHHHHHHHHCT-EEEEEESEEEEETCCEEEEEECCCCTEEEEEE-TSSSEEEEE-TTSS----S-TT---EEE CS
         ETF 100 igkqvaprlAalLgvplitdvteleveggkltvtRpieggnglaevveadlpavltvrpgafepaaimaakkkeve 175
                  gk v+pr+Aa+L+v +++dv+ + +e +  t++Rp+++gn++ +v++ d+++++tvr++af+pa++   ++++v+
  EPX73069.1 124 LGKGVMPRIAAMLDVMQVSDVIRVVDE-K--TFVRPTYAGNVNVHVKTEDPVKLVTVRASAFDPAPAIDNGSAPVT 196
                 ***********************9999.7..*********************************777777999997 PP

>> ETF_alpha  Electron transfer flavoprotein FAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.2   0.1     3e-34   2.7e-30       2      84 .]     221     304 ..     220     304 .. 0.97

  Alignments for each domain:
  == domain 1  score: 104.2 bits;  conditional E-value: 3e-34
                 -TTT-S-EEEE-GGGSSGGGHH.HHHHHHHHHT-EEEE-HHHHTTTSS-CCCB-SSSS-----S-EEEES----HHHHGGGTT- CS
   ETF_alpha   2 dLeeakvvvsgGrGlkskenle.lleelaealgaavgasRavvdagwipeerqvGqtGktvaPklyiavGisGaiqhlaGmkes 84 
                 dL++a++vv+gGr lk+k+++e  l+ la++lgaa+ga+R++vd g+++++ q+GqtGk++aPklyiavG+ Gaiqh+aG+k+s
  EPX73069.1 221 DLSSAERVVAGGRPLKDKATFEkTLTPLADKLGAAIGATRVAVDTGYADNSLQIGQTGKIIAPKLYIAVGVDGAIQHTAGIKDS 304
                 89*******************7699*********************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (341 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       360  (0.0200792); expected 358.6 (0.02)
Passed bias filter:                      312  (0.017402); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.21s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 2725.87
//
Query:       EPX73070.1  [L=409]
Description: DUF890 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      2e-57  194.8   0.0      6e-57  193.3   0.0    1.6  1  Methyltransf_10  RNA methyltransferase
    0.00044   19.8   0.0    0.00077   19.0   0.0    1.3  1  MTS              Methyltransferase small domain
     0.0049   16.3   0.0     0.0076   15.7   0.0    1.2  1  PrmA             Ribosomal protein L11 methyltransferase (Prm
  ------ inclusion threshold ------
      0.033   13.8   0.0       0.14   11.7   0.0    1.9  2  Cons_hypoth95    Conserved hypothetical protein 95


Domain annotation for each model (and alignments):
>> Methyltransf_10  RNA methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  193.3   0.0   1.3e-60     6e-57      18     299 .]      18     278 ..      14     278 .. 0.94

  Alignments for each domain:
  == domain 1  score: 193.3 bits;  conditional E-value: 1.3e-60
                      XHHHHHHHXHHHHTTXEEXTTSXEES-TTSHHHHHHHHHHHHHHHH----.---TTS----HHHHHHHHHHHHHHHTGGGSGTTS.--EEEEES CS
  Methyltransf_10  18 dfaalikvvPelkqfvilnpkGrvsidfadPlavkalnkallrefygvsewdiPdgfliPpvPgradyihyvadllgkadsdisa.qvraldiG 110
                      +f +l + +P l++f++        idf +  av  l+ka+l+ +++++   +P+++l+P vP r+ y+ yv+ ll ++ +d  + +v +ldiG
       EPX73070.1  18 NFQKLSQEYPPLQSFLQE-----GHIDFWNEDAVLTLTKAILKVYFALEL-CLPKNRLCPMVPNRVLYLDYVQKLLQSTMDDFDNeKVTGLDIG 105
                      6899***********984.....469**********************99.9******************************877699****** PP

                      -TTTTHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHHT.T-TTTEEEEE--TT-SCCHHSSTTSS-EEEEEE-S---SS------------.. CS
  Methyltransf_10 111 vGanCiyPllGvteyGWrfvgsevddvslasakaivesnsklsdaiklrkqkekkaifdglieenerydvtlCnPPfhaslaeakagserklkn 204
                      +Ga+CiyPllG  ++ ++f+g+e+d+ s + a  +v+ n +l+d+i+l ++ +  a++ +    + ++++++CnPPf+ s +e        l  
       EPX73070.1 106 TGASCIYPLLGCRLFSFSFLGTEIDSSSYDAACSNVSDN-HLEDKIRLENRCKTDALLSSCPTGQ-EFTFVMCNPPFYGSDEE--------LI- 188
                      ***************************************.*************99*999987665.59**********88665........33. PP

                      .---.....---------TTTSHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEESSGGGHHHHHHHHHHTT-SEEEEEEEEETTEEEEEEEEES- CS
  Methyltransf_10 205 lgkanktralpslnfgGqkaelyceGGevafikklieeskqlakqvlWfttlvskkenlaplkeelkklGaskvtvvelaqGqklsrfiaWsfl 298
                          n +++lp+++ +G+++e+++eGGev+f +++++esk +++++lWft+l++kk++la+l ++l++  + +  + e+  G++ +++++Wsf 
       EPX73070.1 189 ----NYKDSLPNSVCTGNENEMITEGGEVEFARRILRESK-YRREILWFTCLLGKKSSLADLIHDLRDEKIDNYGIYEIYAGKTKRWILSWSFS 277
                      ....3456899****************************7.899*************************************************8 PP

                      - CS
  Methyltransf_10 299 d 299
                      +
       EPX73070.1 278 N 278
                      6 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.0   1.7e-07   0.00077      16     110 ..      80     183 ..      78     197 .. 0.83

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 1.7e-07
                 --HHHHHHHHHCHCC..TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC......EEEEE-STTTTST.TS-EEEEEE-- CS
         MTS  16 lDkGsklLletlpke..lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle......vevvasdvleeve.ekkfdlivsNP 105
                 lD+  klL +t+++   ++ + lD+G+Ga  +   l  +  + +   +++d  + ++a  n+++n+le       ++ +  +l+  +  ++f ++++NP
  EPX73070.1  80 LDYVQKLLQSTMDDFdnEKVTGLDIGTGASCIYPLLGCRLFSFSFLGTEIDSSSYDAACSNVSDNHLEdkirleNRCKTDALLSSCPtGQEFTFVMCNP 178
                 68888999999998743444579********************************************988766555666667777764689******** PP

                 -STTT CS
         MTS 106 Pfhag 110
                 Pf  +
  EPX73070.1 179 PFYGS 183
                 **765 PP

>> PrmA  Ribosomal protein L11 methyltransferase (PrmA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   1.7e-06    0.0076     155     217 ..      91     154 ..      85     177 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1.7e-06
        PrmA 155 leklvkegeevlDvGtG.SGiLaiaaakLgakkvvavDiDevAvkvakeNaelNkveakleval 217
                 ++++ +e+ + lD+GtG S i  +   +L   + +++ iD+ + ++a +N++ N++e+k+++ +
  EPX73070.1  91 MDDFDNEKVTGLDIGTGaSCIYPLLGCRLFSFSFLGTEIDSSSYDAACSNVSDNHLEDKIRLEN 154
                 67888889999******77899************************************998742 PP

>> Cons_hypoth95  Conserved hypothetical protein 95
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   3.2e-05      0.14      71     128 ..     128     185 ..     116     232 .. 0.81
   2 ?   -0.9   0.0      0.24   1.1e+03       3      35 ..     262     293 ..     260     304 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 3.2e-05
                    ES-HHHHHHHHHHHCCCT--TTTEEEEES-HHHHCTS--SS-EEEEEEE--SSSTTCH CS
  Cons_hypoth95  71 ekdkeavkilkenleelkleeetaelkedaleallklakkkeefdivflDPPyakell 128
                    e d++ + +   n++  +le++++  ++ +++all+ + +++ef +v  +PP+  ++ 
     EPX73070.1 128 EIDSSSYDAACSNVSDNHLEDKIRLENRCKTDALLSSCPTGQEFTFVMCNPPFYGSDE 185
                    6778888888999**99***********************************987753 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.24
                    XXSCCCTTXEEEXTTXXXXXSSSHHHHHHHHHH CS
  Cons_hypoth95   3 iigGkakgrkLkvlegkstRPttdrvrealFni 35 
                    i++Gk k+  L+  + ++ RP    +r ++F+i
     EPX73070.1 262 IYAGKTKRWILS-WSFSNRRPPNHLIRPKFFSI 293
                    899999866555.566799**********9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (409 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       515  (0.0287244); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2866.02
//
Query:       EPX73071.1  [L=106]
Description: hypothetical protein SOCG_06263 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       592  (0.0330191); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.24s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 826.24
//
Query:       EPX73072.1  [L=370]
Description: But2 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-35  123.1   0.9    1.1e-35  123.1   0.9    1.7  2  But2      Ubiquitin 3 binding protein But2 C-terminal domain
  ------ inclusion threshold ------
      0.047   13.3   0.0      0.086   12.5   0.0    1.4  1  ApbA      Ketopantoate reductase PanE/ApbA


Domain annotation for each model (and alignments):
>> But2  Ubiquitin 3 binding protein But2 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.3      0.47   4.2e+03      90      90 ..     180     180 ..     140     214 .. 0.47
   2 !  123.1   0.9   1.2e-39   1.1e-35       2     142 .]     219     362 ..     218     362 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.47
        But2  90 n 90 
                 +
  EPX73072.1 180 S 180
                 1 PP

  == domain 2  score: 123.1 bits;  conditional E-value: 1.2e-39
        But2   2 fPhlIvpvssssPdkafgtsyngtvss..t.dvstifnFdipasaagktCslvflfptqsqletssytlsGsgkfkfsklaapatesttynnkPavkee 97 
                 fP+ I+ +++ssPd+++g+ y++ v +  + +v+tif+Fd+p+ + +k C+l+f+++++ + +  +   +G g+f +++l++pa++ tt++n+P++++e
  EPX73072.1 219 FPNGIRLTNTSSPDSNSGNVYSPVVYQkgNdHVNTIFTFDVPQVT-DKDCQLHFHIDKNGF-PIHVDGSNGVGEFVLYNLSSPANDGTTWANTPNRIAE 315
                 9*************************988569***********96.8*************9.************************************* PP

        But2  98 lgk.ttlspGnaytiasfpCp.agqavsyevssa.gdtsLeffqdynp 142
                 +g+ +++s G++yt++++ Cp + ++vsye+s+  ++++Le+f++ np
  EPX73072.1 316 IGRfNCSSDGCSYTTDIT-CPgSYKTVSYELSALtDKSYLEYFEEINP 362
                 ***99*************.*99************9***********98 PP

>> ApbA  Ketopantoate reductase PanE/ApbA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   9.6e-06     0.086       1      48 [.     280     330 ..     280     353 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 9.6e-06
                 EEEES-SHHHHHHHHHHHHHTHCEEEE-SCH.HHHHHHHHCEEEEETT..C CS
        ApbA   1 iailGaGaiGsllaakLakagadvtlilrsr.rlealkknGlrltseg..g 48 
                 i++ G++++G ++ ++L+  ++d t +++++ r++++ + +++ ++++  +
  EPX73072.1 280 IHVDGSNGVGEFVLYNLSSPANDGTTWANTPnRIAEIGRFNCSSDGCSytT 330
                 8999***************999*999999999****999999988888433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (370 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       655  (0.036533); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2672.68
//
Query:       EPX73073.1  [L=107]
Description: hypothetical protein SOCG_00829 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       276  (0.0153941); expected 358.6 (0.02)
Passed bias filter:                      160  (0.00892409); expected 358.6 (0.02)
Passed Vit filter:                         7  (0.000390429); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.26s 00:00:00.62 Elapsed: 00:00:00.42
# Mc/sec: 768.72
//
Query:       EPX73074.1  [L=911]
Description: p150-Glued [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.6e-19   68.5   0.2      7e-19   67.6   0.2    1.4  1  CAP_GLY   CAP-Gly domain


Domain annotation for each model (and alignments):
>> CAP_GLY  CAP-Gly domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.6   0.2   3.9e-23     7e-19       1      62 [.       6      66 ..       6      68 .. 0.93

  Alignments for each domain:
  == domain 1  score: 67.6 bits;  conditional E-value: 3.9e-23
     CAP_GLY  1 vgdrvklkegrrGvvryvGpvpfakgewvGveldepnGkndGsvkgkrYFeckpnrGvFvrp 62
                vgd v + +++ G+vr+ G+++fa+g+w+Gve+ ++ G++dGsv+gkrYF+c++++G+F+r+
  EPX73074.1  6 VGDLVLV-HEEPGIVRFTGSTKFASGIWLGVEMIDKIGRHDGSVQGKRYFTCEEGKGLFIRA 66
                6777764.8899********************9999***********************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (911 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2213  (0.123431); expected 358.6 (0.02)
Passed bias filter:                      407  (0.0227007); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.81u 0.29s 00:00:01.10 Elapsed: 00:00:00.45
# Mc/sec: 6112.25
//
Query:       EPX73075.1  [L=1066]
Description: RNA polymerase II associated Paf1 complex subunit Tpr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.2e-35  117.8   7.5    1.1e-05   25.0   0.2   10.2  9  TPR_1           Tetratricopeptide repeat
    3.2e-31  104.9  21.2    1.9e-05   24.4   0.2   12.4 12  TPR_2           Tetratricopeptide repeat
    7.7e-22   77.6   4.8     0.0012   19.3   0.5    7.9  8  TPR_19          Tetratricopeptide repeat
    1.4e-19   68.6  13.6    0.00023   21.1   0.2   11.2 11  TPR_8           Tetratricopeptide repeat
    2.8e-18   65.2  11.5     0.0035   17.9   0.3   10.6 10  TPR_6           Tetratricopeptide repeat
    1.7e-16   60.6   1.0    7.2e-05   23.4   0.0    8.2  8  TPR_16          Tetratricopeptide repeat
    3.8e-16   58.4   7.9       0.18   12.7   0.0   10.3 10  TPR_14          Tetratricopeptide repeat
    9.6e-16   57.8  16.0    0.00045   20.4   0.0    8.5 10  TPR_12          Tetratricopeptide repeat
    8.4e-15   54.2  13.6     0.0052   16.4   0.1    7.8  8  TPR_11          TPR repeat
    1.5e-10   40.6  14.9       0.28   11.1   0.0    7.7  7  TPR_10          Tetratricopeptide repeat
    3.3e-10   39.2  13.3     0.0093   15.9   0.2    8.9  8  TPR_7           Tetratricopeptide repeat
    2.8e-09   36.7   6.8       0.26   11.8   0.0   10.6 12  TPR_17          Tetratricopeptide repeat
    1.1e-08   34.9   0.0    4.6e-05   23.0   0.0    3.3  2  TPR_MalT        MalT-like TPR region
    2.7e-07   30.7   2.5        1.4    9.1   0.0    5.4  6  ANAPC3          Anaphase-promoting complex, cyclosome, subuni
      1e-06   28.8   0.0        1.9    8.7   0.0    5.8  6  TPR_9           Tetratricopeptide repeat
      0.006   16.3   3.8       0.62    9.7   0.3    4.7  5  RPN7            26S proteasome subunit RPN7
  ------ inclusion threshold ------
       0.16   12.0   5.9       0.33   11.0   0.2    2.8  2  DNA_pol3_tau_5  DNA polymerase III tau subunit V interacting 
        2.7    8.1   9.7         20    5.3   0.3    4.5  4  TPR_3           Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   5.9e-06    0.0059       3      33 ..     177     207 ..     175     208 .. 0.92
   2 !   13.5   0.0     5e-05      0.05       6      34 .]     215     243 ..     211     243 .. 0.95
   3 !   25.0   0.2   1.1e-08   1.1e-05       1      27 [.     326     352 ..     326     358 .. 0.93
   4 ?    0.5   0.0      0.61     6e+02       5      33 ..     364     392 ..     361     393 .. 0.89
   5 !   19.8   0.1     5e-07    0.0005       2      31 ..     476     505 ..     475     507 .. 0.89
   6 !   11.7   0.0   0.00017      0.17       5      34 .]     518     547 ..     518     547 .. 0.96
   7 ?    0.5   0.1      0.63   6.3e+02       3      14 ..     620     631 ..     618     633 .. 0.83
   8 !   11.6   0.2   0.00019      0.19      14      34 .]     647     667 ..     645     667 .. 0.91
   9 !   10.2   0.0   0.00053      0.53       3      28 ..     703     728 ..     701     730 .. 0.89

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 5.9e-06
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1   3 alynlGnayfklgkydeAleyyekALelnPn 33 
                 al +++ ++++ g++  Al+ y++AL  nP+
  EPX73075.1 177 ALIGKARILYSRGNFRGALKLYQRALVSNPQ 207
                 88999*********************98885 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 5e-05
                 HHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   6 nlGnayfklgkydeAleyyekALelnPnn 34 
                 ++G+++ +l++ d+Al++  +A el+ nn
  EPX73075.1 215 GIGLCFWNLNMKDDALAAWVRAKELDQNN 243
                 69*************************98 PP

  == domain 3  score: 25.0 bits;  conditional E-value: 1.1e-08
                 HHHHHHHHHHHHHTT-HHHHHHHHHHH CS
       TPR_1   1 akalynlGnayfklgkydeAleyyekA 27 
                 a+ ++ +G ay+++++y++A  +y++A
  EPX73075.1 326 ADGYFWMGRAYHQMQNYEKAMTCYQRA 352
                 789***********************9 PP

  == domain 4  score: 0.5 bits;  conditional E-value: 0.61
                 HHHHHHHHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1   5 ynlGnayfklgkydeAleyyekALelnPn 33 
                  ++G++   ++++  A   +e+  e  P+
  EPX73075.1 364 LGIGQIQILQNDLTSAKLTFERITEQHPK 392
                 689******************99998887 PP

  == domain 5  score: 19.8 bits;  conditional E-value: 5e-07
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHS CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALeln 31 
                 + l+n+G++ ++lg+++eA +y++ A + +
  EPX73075.1 476 ELLNNIGVLNYHLGNFQEAKDYFSAARKED 505
                 789********************9997766 PP

  == domain 6  score: 11.7 bits;  conditional E-value: 0.00017
                 HHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   5 ynlGnayfklgkydeAleyyekALelnPnn 34 
                 +nl+ +  +lg+ d   e y k L l+P++
  EPX73075.1 518 FNLARCEEELGNIDLSMELYTKILDLQPSF 547
                 69**************************86 PP

  == domain 7  score: 0.5 bits;  conditional E-value: 0.63
                 HHHHHHHHHHHT CS
       TPR_1   3 alynlGnayfkl 14 
                 +l +lGnay+++
  EPX73075.1 620 SLVQLGNAYMRQ 631
                 6779*****987 PP

  == domain 8  score: 11.6 bits;  conditional E-value: 0.00019
                 TT-HHHHHHHHHHHHHHSTTH CS
       TPR_1  14 lgkydeAleyyekALelnPnn 34 
                 ++ y +A++ y++A++ +P+n
  EPX73075.1 647 QKLYIKAVQSYDQAIKFDPKN 667
                 78899**************98 PP

  == domain 9  score: 10.2 bits;  conditional E-value: 0.00053
                 HHHHHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_1   3 alynlGnayfklgkydeAleyyekAL 28 
                 +l n+Gn++ +l+++  A e +e ++
  EPX73075.1 703 TLINIGNCLAELKQFSRATEIFETVI 728
                 689***************99999887 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       5.9   5.8e+03      21      33 ..     122     134 ..     114     135 .. 0.80
   2 !   18.9   0.0   1.1e-06    0.0011       2      33 ..     176     207 ..     175     208 .. 0.92
   3 !    9.0   0.0    0.0016       1.6       7      34 .]     216     243 ..     213     243 .. 0.94
   4 ?    2.6   0.1      0.19   1.9e+02      16      33 ..     270     287 ..     268     288 .. 0.85
   5 !   24.4   0.2   1.9e-08   1.9e-05       1      29 [.     326     354 ..     326     359 .. 0.91
   6 ?    1.1   0.0      0.57   5.7e+02       7      33 ..     366     392 ..     362     393 .. 0.90
   7 !   21.7   0.1   1.4e-07   0.00014       1      31 [.     475     505 ..     475     507 .. 0.93
   8 !   10.1   0.0   0.00071      0.71       5      33 ..     518     546 ..     518     547 .. 0.96
   9 ?   -0.1   0.1       1.4   1.4e+03       4      14 ..     621     631 ..     619     633 .. 0.84
  10 !    8.2   0.0    0.0029       2.9      13      34 .]     646     667 ..     644     667 .. 0.90
  11 !    9.0   0.0    0.0016       1.6       4      29 ..     704     729 ..     701     734 .. 0.89
  12 ?    0.3   0.0         1     1e+03       4      29 ..     740     765 ..     738     768 .. 0.77

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 5.9
       TPR_2  21 leafekAleldPn 33 
                 + ++e+A +l+P+
  EPX73075.1 122 RTYLEAANRLNPK 134
                 7899*******97 PP

  == domain 2  score: 18.9 bits;  conditional E-value: 1.1e-06
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleldPn 33 
                  al   ++++y +g++  Al+++++Al  +P+
  EPX73075.1 176 FALIGKARILYSRGNFRGALKLYQRALVSNPQ 207
                 588999*********************99996 PP

  == domain 3  score: 9.0 bits;  conditional E-value: 0.0016
       TPR_2   7 lGlayyklgdyeeAleafekAleldPnn 34 
                 +Gl+ ++l+  ++Al+a+ +A eld nn
  EPX73075.1 216 IGLCFWNLNMKDDALAAWVRAKELDQNN 243
                 79***********************997 PP

  == domain 4  score: 2.6 bits;  conditional E-value: 0.19
       TPR_2  16 dyeeAleafekAleldPn 33 
                  y eAl++ ++A +  P 
  EPX73075.1 270 YYGEALRYTQAAFKAMPS 287
                 699*********999987 PP

  == domain 5  score: 24.4 bits;  conditional E-value: 1.9e-08
       TPR_2   1 aealynlGlayyklgdyeeAleafekAle 29 
                 a++++++G+ay ++++ye+A  ++++A +
  EPX73075.1 326 ADGYFWMGRAYHQMQNYEKAMTCYQRARS 354
                 689***********************975 PP

  == domain 6  score: 1.1 bits;  conditional E-value: 0.57
       TPR_2   7 lGlayyklgdyeeAleafekAleldPn 33 
                 +G++ + ++d+  A+  fe+  e  P+
  EPX73075.1 366 IGQIQILQNDLTSAKLTFERITEQHPK 392
                 799*****************9999886 PP

  == domain 7  score: 21.7 bits;  conditional E-value: 1.4e-07
       TPR_2   1 aealynlGlayyklgdyeeAleafekAleld 31 
                 +e+l+n+G + y+lg+++eA+++f +A + d
  EPX73075.1 475 PELLNNIGVLNYHLGNFQEAKDYFSAARKED 505
                 689************************9887 PP

  == domain 8  score: 10.1 bits;  conditional E-value: 0.00071
       TPR_2   5 ynlGlayyklgdyeeAleafekAleldPn 33 
                 +nl+++ ++lg+ +   e++ k l l P 
  EPX73075.1 518 FNLARCEEELGNIDLSMELYTKILDLQPS 546
                 79*************************96 PP

  == domain 9  score: -0.1 bits;  conditional E-value: 1.4
       TPR_2   4 lynlGlayykl 14 
                 l +lG+ay+++
  EPX73075.1 621 LVQLGNAYMRQ 631
                 678******98 PP

  == domain 10  score: 8.2 bits;  conditional E-value: 0.0029
       TPR_2  13 klgdyeeAleafekAleldPnn 34 
                 +++ y +A++ +++A++ dP+n
  EPX73075.1 646 RQKLYIKAVQSYDQAIKFDPKN 667
                 577799**************97 PP

  == domain 11  score: 9.0 bits;  conditional E-value: 0.0016
       TPR_2   4 lynlGlayyklgdyeeAleafekAle 29 
                 l n+G+++++l+++ +A e fe +++
  EPX73075.1 704 LINIGNCLAELKQFSRATEIFETVIS 729
                 89********************9987 PP

  == domain 12  score: 0.3 bits;  conditional E-value: 1
       TPR_2   4 lynlGlayyklgdyeeAleafekAle 29 
                 l++lG++++++g+ e+ +++++++l+
  EPX73075.1 740 LNCLGRVWLQRGREEKRIDFLKESLK 765
                 899*********98886666666655 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   4.2e-05     0.042       1      57 [.     185     242 ..     185     246 .. 0.92
   2 !   19.2   0.0   1.3e-06    0.0013       3      60 ..     338     395 ..     331     398 .. 0.96
   3 !   12.9   0.1   0.00012      0.12       7      61 ..     459     512 ..     458     516 .. 0.88
   4 !   19.3   0.5   1.2e-06    0.0012       5      62 ..     489     553 ..     485     559 .. 0.89
   5 !   13.7   0.0   6.7e-05     0.067       9      57 ..     652     700 ..     646     705 .. 0.92
   6 ?    2.7   0.0      0.19   1.9e+02      30      58 ..     706     734 ..     699     740 .. 0.82
   7 ?   -2.8   0.0       9.4   9.4e+03      16      40 ..     769     793 ..     762     794 .. 0.81
   8 ?   -1.6   0.0       4.1     4e+03      12      26 ..     851     865 ..     846     878 .. 0.72

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 4.2e-05
      TPR_19   1 llaegdyaeAlalleqalqedpk.naearllLAeallalgqldeAealLdalpeedpd 57 
                 l+ +g++  Al+l+++al  +p+ +++ r++   + ++l+  d+A a+  ++ e d++
  EPX73075.1 185 LYSRGNFRGALKLYQRALVSNPQiQPDPRIGIGLCFWNLNMKDDALAAWVRAKELDQN 242
                 5779******************************************998888888877 PP

  == domain 2  score: 19.2 bits;  conditional E-value: 1.3e-06
      TPR_19   3 aegdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpddar 60 
                 ++++y+ A+  +++a + +  ++   l+  ++++ +++l+ A+ + +++ e+ p++a+
  EPX73075.1 338 QMQNYEKAMTCYQRARSVEDRHLLSFLGIGQIQILQNDLTSAKLTFERITEQHPKCAE 395
                 799***************************************************9865 PP

  == domain 3  score: 12.9 bits;  conditional E-value: 0.00012
      TPR_19   7 yaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpd.dary 61 
                 +++A+++l++a  +   ++e++ +   + + lg+++eA++  +a+ +ed+d d+++
  EPX73075.1 459 LQRAQDFLKSA--HISIHPELLNNIGVLNYHLGNFQEAKDYFSAARKEDQDvDPEI 512
                 57899999998..555599********************************77775 PP

  == domain 4  score: 19.3 bits;  conditional E-value: 1.2e-06
      TPR_19   5 gdyaeAlalleqalqedpk.naearl....lLAeallalgqldeAealLdalpeedpd..darya 62 
                 g+++eA +++++a +ed + ++e++l    +LA++  +lg++d  ++l  ++++ +p   dar++
  EPX73075.1 489 GNFQEAKDYFSAARKEDQDvDPEILLvldfNLARCEEELGNIDLSMELYTKILDLQPSfaDARVR 553
                 99************************666666*************************97667776 PP

  == domain 5  score: 13.7 bits;  conditional E-value: 6.7e-05
      TPR_19   9 eAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpd 57 
                  A++ + qa++ dpkna a+ + A     + q+ +A  +L ++ e+ +d
  EPX73075.1 652 KAVQSYDQAIKFDPKNAHAAQGIAVTFAHSRQFSKALLILGKIRESIKD 700
                 7999***************************************998766 PP

  == domain 6  score: 2.7 bits;  conditional E-value: 0.19
      TPR_19  30 lLAeallalgqldeAealLdalpeedpdd 58 
                 +  ++l +l+q+  A ++ +++  ++  d
  EPX73075.1 706 NIGNCLAELKQFSRATEIFETVISMTGED 734
                 5679***************9998887775 PP

  == domain 7  score: -2.8 bits;  conditional E-value: 9.4
      TPR_19  16 qalqedpknaearllLAeallalgq 40 
                  al+++ +n  ++ + A ++++l +
  EPX73075.1 769 MALEKNQENTSLQFNVAFVQFQLSE 793
                 3799999999999999999999876 PP

  == domain 8  score: -1.6 bits;  conditional E-value: 4.1
      TPR_19  12 alleqalqedpknae 26 
                 ++le+alq+  ++++
  EPX73075.1 851 KRLERALQQQSEYEA 865
                 789999999777554 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.36   3.6e+02       5      32 ..     179     206 ..     177     208 .. 0.84
   2 ?    0.5   0.0      0.98   9.7e+02       7      34 .]     216     243 ..     213     243 .. 0.90
   3 !   21.1   0.2   2.3e-07   0.00023       1      27 [.     326     352 ..     326     356 .. 0.94
   4 ?    2.8   0.0      0.18   1.8e+02       6      29 ..     365     388 ..     362     393 .. 0.85
   5 ?   -1.5   0.0         4     4e+03       1      14 [.     394     407 ..     394     411 .. 0.81
   6 !   10.4   0.0   0.00063      0.63       2      27 ..     476     501 ..     475     507 .. 0.91
   7 !   11.0   0.0    0.0004       0.4       5      33 ..     518     546 ..     518     547 .. 0.95
   8 ?   -2.2   0.1       6.9   6.8e+03       3      14 ..     620     631 ..     619     633 .. 0.80
   9 !    7.6   0.1    0.0051       5.1      14      34 .]     647     667 ..     644     667 .. 0.88
  10 !    8.3   0.0     0.003         3       3      31 ..     703     731 ..     701     734 .. 0.90
  11 ?    0.2   0.0       1.2   1.2e+03      12      31 ..     748     767 ..     740     768 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.36
                 HHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   5 ynlgsiylklgdyeeAkeyyekaleldp 32 
                   +++i+ + g++  A + y++al  +p
  EPX73075.1 179 IGKARILYSRGNFRGALKLYQRALVSNP 206
                 568999****************996555 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.98
                 HHHHHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8   7 lgsiylklgdyeeAkeyyekaleldpdn 34 
                 +g++ ++l+ ++ A ++  +a eld++n
  EPX73075.1 216 IGLCFWNLNMKDDALAAWVRAKELDQNN 243
                 8999************999999999876 PP

  == domain 3  score: 21.1 bits;  conditional E-value: 2.3e-07
                 CCHHHHHHHHHHHTT-HHHHHHHHHHH CS
       TPR_8   1 aeayynlgsiylklgdyeeAkeyyeka 27 
                 a+ y+++g++y+++++ye+A+ +y++a
  EPX73075.1 326 ADGYFWMGRAYHQMQNYEKAMTCYQRA 352
                 678**********************98 PP

  == domain 4  score: 2.8 bits;  conditional E-value: 0.18
                 HHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_8   6 nlgsiylklgdyeeAkeyyekale 29 
                  +g+i + ++d+ +Ak ++e+ +e
  EPX73075.1 365 GIGQIQILQNDLTSAKLTFERITE 388
                 59******************9877 PP

  == domain 5  score: -1.5 bits;  conditional E-value: 4
                 CCHHHHHHHHHHHT CS
       TPR_8   1 aeayynlgsiylkl 14 
                 aea+  lg++y + 
  EPX73075.1 394 AEALIILGCLYASE 407
                 789999*****765 PP

  == domain 6  score: 10.4 bits;  conditional E-value: 0.00063
                 CHHHHHHHHHHHTT-HHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyeka 27 
                 e+++n+g +   lg+++eAk y+  a
  EPX73075.1 476 ELLNNIGVLNYHLGNFQEAKDYFSAA 501
                 789*******************9766 PP

  == domain 7  score: 11.0 bits;  conditional E-value: 0.0004
                 HHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   5 ynlgsiylklgdyeeAkeyyekaleldpd 33 
                 +nl+++ ++lg+++ ++e y k l+l+p+
  EPX73075.1 518 FNLARCEEELGNIDLSMELYTKILDLQPS 546
                 79*************************96 PP

  == domain 8  score: -2.2 bits;  conditional E-value: 6.9
                 HHHHHHHHHHHT CS
       TPR_8   3 ayynlgsiylkl 14 
                 ++++lg++y+ +
  EPX73075.1 620 SLVQLGNAYMRQ 631
                 57899***9875 PP

  == domain 9  score: 7.6 bits;  conditional E-value: 0.0051
                 TT-HHHHHHHHHHHHHHHHH. CS
       TPR_8  14 lgdyeeAkeyyekaleldpdn 34 
                 ++ y +A+++y +a++ dp+n
  EPX73075.1 647 QKLYIKAVQSYDQAIKFDPKN 667
                 567889*************97 PP

  == domain 10  score: 8.3 bits;  conditional E-value: 0.003
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyekaleld 31 
                  + n+g+++ +l+++  A e +e ++++ 
  EPX73075.1 703 TLINIGNCLAELKQFSRATEIFETVISMT 731
                 5789**********************985 PP

  == domain 11  score: 0.2 bits;  conditional E-value: 1.2
                 HHTT-HHHHHHHHHHHHHHH CS
       TPR_8  12 lklgdyeeAkeyyekaleld 31 
                 l+ g+ e+ + ++++ l+++
  EPX73075.1 748 LQRGREEKRIDFLKESLKYS 767
                 6789*************986 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.1   0.1    0.0097       9.7       3      31 ..     178     206 ..     176     207 .. 0.85
   2 ?    1.4   0.0      0.63   6.3e+02       6      23 ..     216     233 ..     214     238 .. 0.89
   3 !   17.9   0.3   3.6e-06    0.0035       1      27 [.     327     353 ..     327     354 .. 0.91
   4 !    9.0   0.0    0.0024       2.3       3      32 ..     363     392 ..     362     392 .. 0.94
   5 ?   -1.6   0.1       5.6   5.6e+03       6      26 ..     443     462 ..     442     464 .. 0.86
   6 ?    5.1   0.0     0.041        41       5      29 ..     480     504 ..     480     507 .. 0.89
   7 !   10.5   0.0   0.00078      0.78       4      31 ..     518     545 ..     515     546 .. 0.93
   8 ?    3.0   0.1       0.2     2e+02       1      31 [.     619     665 ..     619     667 .. 0.82
   9 ?    5.3   0.0     0.035        35       5      27 ..     706     728 ..     703     729 .. 0.92
  10 ?   -0.1   0.1       1.8   1.8e+03       5      24 ..     870     888 ..     867     889 .. 0.87

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0097
                 HHHHHHHHHHHHHHHHHHHHHHHHHHH-T CS
       TPR_6   3 lyklalsyrklgdtdkAlealerlikeYP 31 
                 l   a+ +++ g+ + Al++++r + + P
  EPX73075.1 178 LIGKARILYSRGNFRGALKLYQRALVSNP 206
                 556799999988***********998888 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.63
                 HHHHHHHHHHHHHHHHHH CS
       TPR_6   6 lalsyrklgdtdkAleal 23 
                 ++l++ +l+ +d+Al+a+
  EPX73075.1 216 IGLCFWNLNMKDDALAAW 233
                 89*****99*****9986 PP

  == domain 3  score: 17.9 bits;  conditional E-value: 3.6e-06
                 HHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   1 dAlyklalsyrklgdtdkAlealerli 27 
                 d +++++++y ++++++kA++ ++r +
  EPX73075.1 327 DGYFWMGRAYHQMQNYEKAMTCYQRAR 353
                 679*********88**********975 PP

  == domain 4  score: 9.0 bits;  conditional E-value: 0.0024
                 HHHHHHHHHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6   3 lyklalsyrklgdtdkAlealerlikeYPd 32 
                 ++ +++ ++ ++d + A+ ++er+ +++P+
  EPX73075.1 363 FLGIGQIQILQNDLTSAKLTFERITEQHPK 392
                 6889*************************6 PP

  == domain 5  score: -1.6 bits;  conditional E-value: 5.6
                 HHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   6 lalsyrklgdtdkAlealerl 26 
                 +a++ +k  dt k+l  l+r 
  EPX73075.1 443 QARLWEKE-DTKKSLSFLQRA 462
                 58888999.*********996 PP

  == domain 6  score: 5.1 bits;  conditional E-value: 0.041
                 HHHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   5 klalsyrklgdtdkAlealerlike 29 
                 +++ + + lg+ ++A++++   +ke
  EPX73075.1 480 NIGVLNYHLGNFQEAKDYFSAARKE 504
                 589999**99*********988876 PP

  == domain 7  score: 10.5 bits;  conditional E-value: 0.00078
                 HHHHHHHHHHHHHHHHHHHHHHHHHH-T CS
       TPR_6   4 yklalsyrklgdtdkAlealerlikeYP 31 
                 ++la++ ++lg+ d ++e++ ++++  P
  EPX73075.1 518 FNLARCEEELGNIDLSMELYTKILDLQP 545
                 89**********************9888 PP

  == domain 8  score: 3.0 bits;  conditional E-value: 0.2
                 HHHHHHHHHHHHH................HHHHHHHHHHHHHHHH-T CS
       TPR_6   1 dAlyklalsyrkl................gdtdkAlealerlikeYP 31 
                 ++l +l+ +y ++                + + kA++ +++ ik  P
  EPX73075.1 619 YSLVQLGNAYMRQareirvqndkdhskrqKLYIKAVQSYDQAIKFDP 665
                 67889999999977999999998888887888899999999998666 PP

  == domain 9  score: 5.3 bits;  conditional E-value: 0.035
                 HHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   5 klalsyrklgdtdkAlealerli 27 
                 +++ ++ +l++ ++A e++e +i
  EPX73075.1 706 NIGNCLAELKQFSRATEIFETVI 728
                 79*******************98 PP

  == domain 10  score: -0.1 bits;  conditional E-value: 1.8
                 HHHHHHHHHHHHHHHHHHHH CS
       TPR_6   5 klalsyrklgdtdkAleale 24 
                 kl+++ ++  +++kA+++ e
  EPX73075.1 870 KLGEAKLNR-EKEKARRLAE 888
                 899999999.******9876 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.0   7.2e-08   7.2e-05       3      62 ..     181     237 ..     179     243 .. 0.92
   2 ?   -0.4   0.0       1.9   1.9e+03      13      32 ..     271     290 ..     268     299 .. 0.86
   3 !    9.0   0.0    0.0022       2.2       4      54 ..     333     380 ..     332     392 .. 0.87
   4 ?    5.2   0.0     0.033        33      10      43 ..     373     403 ..     364     410 .. 0.87
   5 !    6.9   0.0    0.0099       9.9      33      65 ..     474     506 ..     459     510 .. 0.85
   6 ?    5.0   0.0      0.04        40       3      38 ..     520     552 ..     517     563 .. 0.61
   7 ?    1.8   0.0      0.39   3.9e+02      15      55 ..     652     690 ..     646     696 .. 0.85
   8 ?   -0.2   0.0       1.6   1.6e+03       7      51 ..     711     754 ..     706     765 .. 0.79

  Alignments for each domain:
  == domain 1  score: 23.4 bits;  conditional E-value: 7.2e-08
      TPR_16   3 laraalragdyddAaaaleaalkrdpssPd.aaeAllllgdaalrqgrlaeAa.alyraalr 62 
                 +ar+++ +g+++ A++++++al ++   P+  ++ + + g++++ ++  ++A+ a++ra  +
  EPX73075.1 181 KARILYSRGNFRGALKLYQRALVSN---PQiQPDPRIGIGLCFWNLNMKDDALaAWVRA--K 237
                 79***********************...888*************************998..5 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 1.9
      TPR_16  13 yddAaaaleaalkrdpssPd 32 
                 y +A+++ +aa k+ ps+P+
  EPX73075.1 271 YGEALRYTQAAFKAMPSDPV 290
                 67899999999999999986 PP

  == domain 3  score: 9.0 bits;  conditional E-value: 0.0022
      TPR_16   4 araalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAa 54 
                 +ra+ + ++y++A   +++a+       ++  + l+ g++   q++l+ A 
  EPX73075.1 333 GRAYHQMQNYEKAMTCYQRARSVE---DRHLLSFLGIGQIQILQNDLTSAK 380
                 89999*******************...99999********99999999885 PP

  == domain 4  score: 5.2 bits;  conditional E-value: 0.033
      TPR_16  10 agdyddAaaaleaalkrdpssPdaaeAllllgda 43 
                 ++d + A   +e+ ++++   P +aeAl  lg +
  EPX73075.1 373 QNDLTSAKLTFERITEQH---PKCAEALIILGCL 403
                 899999************...*******999955 PP

  == domain 5  score: 6.9 bits;  conditional E-value: 0.0099
      TPR_16  33 aaeAllllgdaalrqgrlaeAaalyraalraap 65 
                 ++e l++ g++ +++g+++eA +++ aa +++ 
  EPX73075.1 474 HPELLNNIGVLNYHLGNFQEAKDYFSAARKEDQ 506
                 78899999*************999999987765 PP

  == domain 6  score: 5.0 bits;  conditional E-value: 0.04
      TPR_16   3 laraalragdyddAaaaleaalkrdpssPdaaeAll 38 
                 lar   ++g+ d   ++++  l+++   P  a+A+ 
  EPX73075.1 520 LARCEEELGNIDLSMELYTKILDLQ---PSFADARV 552
                 4444455666666666666666666...66666665 PP

  == domain 7  score: 1.8 bits;  conditional E-value: 0.39
      TPR_16  15 dAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAa.a 55 
                 +A+  +++a+k d   P +a+A+ + ++ +++   + +A+  
  EPX73075.1 652 KAVQSYDQAIKFD---PKNAHAAQGIAVTFAHSRQFSKALlI 690
                 689999*******...9*999999999999999998888744 PP

  == domain 8  score: -0.2 bits;  conditional E-value: 1.6
      TPR_16   7 alragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrla 51 
                 +++++++ +A + +e+++ + +++   +  l+ lg+++l++gr +
  EPX73075.1 711 LAELKQFSRATEIFETVISMTGEDD-VYGILNCLGRVWLQRGREE 754
                 5678889999999999999998776.6888888999999999866 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1       7.6   7.6e+03      17      37 ..     118     137 ..     113     142 .. 0.71
   2 !   12.7   0.0   0.00018      0.18       8      33 ..     182     207 ..     176     213 .. 0.88
   3 ?   -1.6   0.0       7.3   7.2e+03      17      35 ..     271     289 ..     264     290 .. 0.82
   4 !    8.5   0.0    0.0042       4.1       4      29 ..     329     354 ..     326     365 .. 0.86
   5 ?    4.8   0.0     0.062        61       8      41 ..     367     400 ..     362     401 .. 0.85
   6 ?    5.6   0.0     0.035        35      11      39 ..     485     514 ..     475     516 .. 0.76
   7 !   11.6   0.0    0.0004       0.4       7      42 ..     520     555 ..     518     559 .. 0.88
   8 ?    4.3   0.0     0.094        93      14      38 ..     647     671 ..     642     677 .. 0.82
   9 ?    0.0   0.0       2.1   2.1e+03      11      35 ..     711     735 ..     707     746 .. 0.79
  10 ?    2.1   0.0      0.45   4.5e+02       3      38 ..     746     781 ..     738     787 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 7.6
      TPR_14  17 pdeAiallrralalaPddaea 37 
                 ++  +++l++a +l+P+ +ea
  EPX73075.1 118 LQNVRTYLEAANRLNPK-LEA 137
                 556689999*9999998.444 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 0.00018
      TPR_14   8 aeallalGdpdeAiallrralalaPd 33 
                 a++l+ +G++++A++l++ral  +P+
  EPX73075.1 182 ARILYSRGNFRGALKLYQRALVSNPQ 207
                 899******************98885 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 7.3
      TPR_14  17 pdeAiallrralalaPdda 35 
                 + eA+++ ++a ++ P+d+
  EPX73075.1 271 YGEALRYTQAAFKAMPSDP 289
                 7799999999999888876 PP

  == domain 4  score: 8.5 bits;  conditional E-value: 0.0042
      TPR_14   4 llalaeallalGdpdeAiallrrala 29 
                 +  +++a+ + +++++A+++++ra +
  EPX73075.1 329 YFWMGRAYHQMQNYEKAMTCYQRARS 354
                 66799******************976 PP

  == domain 5  score: 4.8 bits;  conditional E-value: 0.062
      TPR_14   8 aeallalGdpdeAiallrralalaPddaeawlll 41 
                 +++   + d+  A   ++r+ +++P+ aea++ l
  EPX73075.1 367 GQIQILQNDLTSAKLTFERITEQHPKCAEALIIL 400
                 666777889999999**************99866 PP

  == domain 6  score: 5.6 bits;  conditional E-value: 0.035
      TPR_14  11 llalGdpdeAiallrralalaPd.daeawl 39 
                  ++lG+++eA +++ +a + + d d+e++l
  EPX73075.1 485 NYHLGNFQEAKDYFSAARKEDQDvDPEILL 514
                 5799*************8876663455555 PP

  == domain 7  score: 11.6 bits;  conditional E-value: 0.0004
      TPR_14   7 laeallalGdpdeAiallrralalaPddaeawllla 42 
                 la+ +++lG+ d +++l+ ++l+l+P++a+a+ +l 
  EPX73075.1 520 LARCEEELGNIDLSMELYTKILDLQPSFADARVRLC 555
                 788899********************9988887764 PP

  == domain 8  score: 4.3 bits;  conditional E-value: 0.094
      TPR_14  14 lGdpdeAiallrralalaPddaeaw 38 
                 +  + +A++ +++a++ +P++a a 
  EPX73075.1 647 QKLYIKAVQSYDQAIKFDPKNAHAA 671
                 555679**************99665 PP

  == domain 9  score: 0.0 bits;  conditional E-value: 2.1
      TPR_14  11 llalGdpdeAiallrralalaPdda 35 
                 l++l ++ +A ++++ +++   +d+
  EPX73075.1 711 LAELKQFSRATEIFETVISMTGEDD 735
                 78999***********999655544 PP

  == domain 10  score: 2.1 bits;  conditional E-value: 0.45
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddaeaw 38 
                 ++l++++ + + + ++e++++ r al+++ ++  ++
  EPX73075.1 746 VWLQRGREEKRIDFLKESLKYSRMALEKNQENTSLQ 781
                 577777778888888888888888888887776665 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   0.0    0.0016       1.6      45      72 ..     175     202 ..     155     202 .. 0.79
   2 !   16.7   0.2   6.7e-06    0.0067       6      73 ..     329     388 ..     324     392 .. 0.85
   3 ?   -0.8   0.0       1.9   1.9e+03      39      56 ..     388     405 ..     383     411 .. 0.82
   4 ?   -1.2   0.0       2.6   2.6e+03      54      75 ..     446     466 ..     437     470 .. 0.73
   5 !   20.4   0.0   4.5e-07   0.00045       5      75 ..     477     544 ..     474     546 .. 0.90
   6 ?    5.2   0.0     0.027        26      23      70 ..     647     693 ..     638     700 .. 0.85
   7 !   10.8   0.0   0.00047      0.47      26      73 ..     684     729 ..     683     733 .. 0.88
   8 !    8.4   0.0    0.0025       2.5       4      33 ..     702     731 ..     700     769 .. 0.60
   9 ?   -0.7   0.0       1.8   1.8e+03       5      44 ..     739     778 ..     735     791 .. 0.77
  10 ?   -2.1   0.4       4.9   4.9e+03      27      67 ..     854     886 ..     849     891 .. 0.48

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.0016
      TPR_12  45 attlrnLgrlyralgryeeAlelleeal 72 
                 + +l++ +r+++ +g+++ Al+l+++al
  EPX73075.1 175 VFALIGKARILYSRGNFRGALKLYQRAL 202
                 5678888899999999999999999987 PP

  == domain 2  score: 16.7 bits;  conditional E-value: 6.7e-06
      TPR_12   6 lnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleeala 73 
                 +  ++ +++++++y++A +++++a    r++  +d+   + +  ++g+++ +++++  A   +e+ ++
  EPX73075.1 329 YFWMGRAYHQMQNYEKAMTCYQRA----RSV--EDR--HLLSFLGIGQIQILQNDLTSAKLTFERITE 388
                 55699*******************....555..555..577*********************999876 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 1.9
      TPR_12  39 pdhpltattlrnLgrlyr 56 
                 ++hp  a++l+ Lg ly 
  EPX73075.1 388 EQHPKCAEALIILGCLYA 405
                 68*************995 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 2.6
      TPR_12  54 lyralgryeeAlelleealaia 75 
                 l ++ +++++ l++l++a + +
  EPX73075.1 446 L-WEKEDTKKSLSFLQRAQDFL 466
                 3.77788888888888886655 PP

  == domain 5  score: 20.4 bits;  conditional E-value: 4.5e-07
      TPR_12   5 alnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealaia 75 
                 +lnn++++ ++lg+++eA +++ +a+   + +   d + ++   +nL+r+ ++lg+ +   el+++ l++ 
  EPX73075.1 477 LLNNIGVLNYHLGNFQEAKDYFSAARKEDQDV---DPEILLVLDFNLARCEEELGNIDLSMELYTKILDLQ 544
                 789**********************9999888...3347899999**********************9986 PP

  == domain 6  score: 5.2 bits;  conditional E-value: 0.027
      TPR_12  23 lellekaleia.rrllGpdhpltattlrnLgrlyralgryeeAlellee 70 
                 ++l+ ka++ + +++  +  p  a + ++++ ++  + ++ +Al +l +
  EPX73075.1 647 QKLYIKAVQSYdQAI--KFDPKNAHAAQGIAVTFAHSRQFSKALLILGK 693
                 689999999997777..899999*************9******988765 PP

  == domain 7  score: 10.8 bits;  conditional E-value: 0.00047
      TPR_12  26 lekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleeala 73 
                 + kal i  ++   ++   +ttl+n+g ++ +l+++  A e++e ++ 
  EPX73075.1 684 FSKALLILGKI--RESIKDVTTLINIGNCLAELKQFSRATEIFETVIS 729
                 67888888888..7899999***********************98876 PP

  == domain 8  score: 8.4 bits;  conditional E-value: 0.0025
      TPR_12   4 talnnlaavlrrlgrydeAlellekaleia 33 
                 t+l n++++l++l+++  A e++e+++ + 
  EPX73075.1 702 TTLINIGNCLAELKQFSRATEIFETVISMT 731
                 345566666666666666666666665555 PP

  == domain 9  score: -0.7 bits;  conditional E-value: 1.8
      TPR_12   5 alnnlaavlrrlgrydeAlellekaleiarrllGpdhplt 44 
                 +ln l+ v +++gr ++ +++l+++l   r +l+++ ++t
  EPX73075.1 739 ILNCLGRVWLQRGREEKRIDFLKESLKYSRMALEKNQENT 778
                 6767888888888888888888888888888777777665 PP

  == domain 10  score: -2.1 bits;  conditional E-value: 4.9
      TPR_12  27 ekaleiarrllGpdhpltattlrnLgrlyralgryeeAlel 67 
                 e+al++++       +++a++   Lg++  +  + e+A++l
  EPX73075.1 854 ERALQQQS-------EYEASVAVKLGEAK-LNREKEKARRL 886
                 44444442.......22555555555554.33345555554 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.0   3.1e-05      0.03       2      26 ..     183     207 ..     182     224 .. 0.85
   2 ?    4.7   0.8     0.024        24      11      40 ..     227     256 ..     226     257 .. 0.92
   3 !   16.4   0.1   5.2e-06    0.0052       1      20 [.     333     352 ..     333     355 .. 0.97
   4 ?   -1.4   0.1       1.9   1.9e+03      28      42 .]     475     489 ..     474     489 .. 0.90
   5 ?    3.7   0.0      0.05        50       6      34 ..     526     554 ..     526     561 .. 0.87
   6 ?   -0.7   0.0       1.2   1.2e+03      28      41 ..     618     631 ..     615     631 .. 0.75
   7 !   15.7   0.1     9e-06     0.009      12      30 ..     652     670 ..     647     678 .. 0.90
   8 ?   -0.8   0.0       1.2   1.2e+03      20      41 ..     770     791 ..     768     792 .. 0.92

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 3.1e-05
      TPR_11   2 dayyeqGkyeeAieaYkkAlkldPd 26 
                 +++y++G++ +A++ Y++Al  +P+
  EPX73075.1 183 RILYSRGNFRGALKLYQRALVSNPQ 207
                 79******************98886 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.024
      TPR_11  11 eeAieaYkkAlkldPdnaeayynLGlayyk 40 
                 ++A++a+ +A +ld++n  +   LGl yy 
  EPX73075.1 227 DDALAAWVRAKELDQNNHFVNTYLGLYYYD 256
                 68***************9999999999986 PP

  == domain 3  score: 16.4 bits;  conditional E-value: 5.2e-06
      TPR_11   1 GdayyeqGkyeeAieaYkkA 20 
                 G+ay++ ++ye+A+++Y++A
  EPX73075.1 333 GRAYHQMQNYEKAMTCYQRA 352
                 99*****************9 PP

  == domain 4  score: -1.4 bits;  conditional E-value: 1.9
      TPR_11  28 aeayynLGlayykqG 42 
                 +e+++n+G++ y +G
  EPX73075.1 475 PELLNNIGVLNYHLG 489
                 8999******99887 PP

  == domain 5  score: 3.7 bits;  conditional E-value: 0.05
      TPR_11   6 eqGkyeeAieaYkkAlkldPdnaeayynL 34 
                 e+G+++ ++e Y k l+l P++a+a   L
  EPX73075.1 526 ELGNIDLSMELYTKILDLQPSFADARVRL 554
                 6899********************98666 PP

  == domain 6  score: -0.7 bits;  conditional E-value: 1.2
      TPR_11  28 aeayynLGlayykq 41 
                    +  LG+ay++q
  EPX73075.1 618 IYSLVQLGNAYMRQ 631
                 5556689****987 PP

  == domain 7  score: 15.7 bits;  conditional E-value: 9e-06
      TPR_11  12 eAieaYkkAlkldPdnaea 30 
                 +A+++Y +A+k+dP+na a
  EPX73075.1 652 KAVQSYDQAIKFDPKNAHA 670
                 8***************965 PP

  == domain 8  score: -0.8 bits;  conditional E-value: 1.2
      TPR_11  20 AlkldPdnaeayynLGlayykq 41 
                 Al+ +++n ++ +n +++++++
  EPX73075.1 770 ALEKNQENTSLQFNVAFVQFQL 791
                 999***************9986 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   0.0   0.00028      0.28       9      29 ..     182     202 ..     178     204 .. 0.95
   2 !    9.7   0.2   0.00076      0.76       8      30 ..     332     354 ..     331     360 .. 0.89
   3 !    8.5   0.2    0.0019       1.9       5      25 ..     478     498 ..     476     502 .. 0.91
   4 ?   -1.6   0.2       2.8   2.8e+03       4      16 ..     620     632 ..     619     634 .. 0.80
   5 ?   -2.0   0.0       3.8   3.8e+03      22      35 ..     647     660 ..     638     664 .. 0.61
   6 !    6.4   0.0    0.0083       8.3       3      31 ..     702     730 ..     701     733 .. 0.94
   7 !    8.0   0.0    0.0026       2.6       4      39 ..     739     774 ..     736     777 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00028
      TPR_10   9 analrqrgrydeAealleeal 29 
                 a++l++rg++ +A++l+++al
  EPX73075.1 182 ARILYSRGNFRGALKLYQRAL 202
                 899*****************8 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00076
      TPR_10   8 LanalrqrgrydeAealleeala 30 
                 +++a++q+++y++A+  +++a +
  EPX73075.1 332 MGRAYHQMQNYEKAMTCYQRARS 354
                 79******************966 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.0019
      TPR_10   5 lnNLanalrqrgrydeAeall 25 
                 lnN++++ +++g+++eA +++
  EPX73075.1 478 LNNIGVLNYHLGNFQEAKDYF 498
                 8****************9886 PP

  == domain 4  score: -1.6 bits;  conditional E-value: 2.8
      TPR_10   4 slnNLanalrqrg 16 
                 sl  L+na+ ++ 
  EPX73075.1 620 SLVQLGNAYMRQA 632
                 6778*****8885 PP

  == domain 5  score: -2.0 bits;  conditional E-value: 3.8
      TPR_10  22 ealleealairrrl 35 
                  +l+++a++ + ++
  EPX73075.1 647 QKLYIKAVQSYDQA 660
                 45666666665443 PP

  == domain 6  score: 6.4 bits;  conditional E-value: 0.0083
      TPR_10   3 sslnNLanalrqrgrydeAealleealai 31 
                 ++l N++n l +++++ +A +++e ++++
  EPX73075.1 702 TTLINIGNCLAELKQFSRATEIFETVISM 730
                 7999**********************997 PP

  == domain 7  score: 8.0 bits;  conditional E-value: 0.0026
      TPR_10   4 slnNLanalrqrgrydeAealleealairrrllGpd 39 
                 +ln L+++  qrgr ++  ++l+e+l   r +l+ +
  EPX73075.1 739 ILNCLGRVWLQRGREEKRIDFLKESLKYSRMALEKN 774
                 79**************************99999876 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.0   0.00043      0.43       6      34 ..     182     208 ..     177     210 .. 0.83
   2 !   15.9   0.2   9.3e-06    0.0093       5      27 ..     332     352 ..     332     360 .. 0.90
   3 ?    3.3   0.0     0.098        98       2      27 ..     478     501 ..     477     509 .. 0.81
   4 ?    2.4   0.0      0.19   1.9e+02       3      28 ..     518     543 ..     515     551 .. 0.83
   5 ?    0.6   0.1      0.73   7.3e+02       1      13 [.     620     632 ..     620     633 .. 0.88
   6 ?   -2.1   0.0       5.5   5.5e+03      17      31 ..     652     664 ..     647     668 .. 0.70
   7 ?    4.5   0.0     0.042        42       1      29 [.     703     731 ..     703     739 .. 0.84
   8 ?   -0.3   0.1       1.4   1.4e+03       4      19 ..     852     867 ..     851     869 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00043
       TPR_7   6 arlysrlGdyeeAielyeqsLaltkdped 34 
                 ar+  ++G+++ A++ly++  al + p++
  EPX73075.1 182 ARILYSRGNFRGALKLYQR--ALVSNPQI 208
                 8998889************..88887765 PP

  == domain 2  score: 15.9 bits;  conditional E-value: 9.3e-06
       TPR_7   5 LarlysrlGdyeeAielyeqsLa 27 
                 ++r+y+++++ye+A ++y++  a
  EPX73075.1 332 MGRAYHQMQNYEKAMTCYQR--A 352
                 79*****************9..4 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.098
       TPR_7   2 LlnLarlysrlGdyeeAielyeqsLa 27 
                 L+n+++l   lG+++eA +++ +  a
  EPX73075.1 478 LNNIGVLNYHLGNFQEAKDYFSA--A 501
                 89999998889*******99976..5 PP

  == domain 4  score: 2.4 bits;  conditional E-value: 0.19
       TPR_7   3 lnLarlysrlGdyeeAielyeqsLal 28 
                 +nLar+ ++lG+ +   ely++ L l
  EPX73075.1 518 FNLARCEEELGNIDLSMELYTKILDL 543
                 699999999*************6665 PP

  == domain 5  score: 0.6 bits;  conditional E-value: 0.73
       TPR_7   1 aLlnLarlysrlG 13 
                 +L++L+++y r+ 
  EPX73075.1 620 SLVQLGNAYMRQA 632
                 699*******985 PP

  == domain 6  score: -2.1 bits;  conditional E-value: 5.5
       TPR_7  17 eAielyeqsLaltkd 31 
                 +A++ y q  a+  d
  EPX73075.1 652 KAVQSYDQ--AIKFD 664
                 78888888..66555 PP

  == domain 7  score: 4.5 bits;  conditional E-value: 0.042
       TPR_7   1 aLlnLarlysrlGdyeeAielyeqsLalt 29 
                 +L n++++  +l ++++A e++e ++ +t
  EPX73075.1 703 TLINIGNCLAELKQFSRATEIFETVISMT 731
                 689********************966665 PP

  == domain 8  score: -0.3 bits;  conditional E-value: 1.4
       TPR_7   4 nLarlysrlGdyeeAi 19 
                 +L r+ +++ +ye  +
  EPX73075.1 852 RLERALQQQSEYEASV 867
                 6999********9877 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.69   6.9e+02      12      33 ..     174     195 ..     167     196 .. 0.83
   2 ?   -2.1   0.0       6.9   6.8e+03       1      11 [.     197     207 ..     197     219 .. 0.89
   3 ?   -1.2   0.4       3.5   3.5e+03       7      25 ..     238     256 ..     236     265 .. 0.87
   4 ?    1.8   0.0       0.4     4e+02      13      32 ..     326     345 ..     320     347 .. 0.89
   5 ?    1.4   0.0      0.54   5.4e+02       2      25 ..     383     406 ..     382     414 .. 0.87
   6 ?    4.3   0.0     0.065        64      13      33 ..     475     495 ..     472     496 .. 0.92
   7 ?   -1.7   0.0       5.3   5.3e+03      17      29 ..     518     530 ..     518     533 .. 0.87
   8 ?    1.5   0.0       0.5   4.9e+02       1      17 [.     536     552 ..     536     560 .. 0.90
   9 ?    2.1   0.0      0.32   3.2e+02       4      26 ..     609     631 ..     606     647 .. 0.82
  10 !   11.8   0.0   0.00026      0.26       2      32 ..     657     687 ..     656     688 .. 0.91
  11 ?    1.0   0.0      0.73   7.3e+02      11      32 ..     699     720 ..     694     722 .. 0.88
  12 ?   -1.7   0.0         5     5e+03      16      29 ..     740     753 ..     737     756 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.69
      TPR_17  12 nadaynnLAelllknGdlmtAr 33 
                 n+ a+  +A++l+++G+++ A+
  EPX73075.1 174 NVFALIGKARILYSRGNFRGAL 195
                 78889999*********99987 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 6.9
      TPR_17   1 lylkaleldPn 11 
                 ly++al  +P 
  EPX73075.1 197 LYQRALVSNPQ 207
                 7*****99996 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 3.5
      TPR_17   7 eldPnnadaynnLAelllk 25 
                 eld nn  + ++L+ +++ 
  EPX73075.1 238 ELDQNNHFVNTYLGLYYYD 256
                 78999*99******99984 PP

  == domain 4  score: 1.8 bits;  conditional E-value: 0.4
      TPR_17  13 adaynnLAelllknGdlmtA 32 
                 ad y+ +++++++  ++++A
  EPX73075.1 326 ADGYFWMGRAYHQMQNYEKA 345
                 789***********999998 PP

  == domain 5  score: 1.4 bits;  conditional E-value: 0.54
      TPR_17   2 ylkaleldPnnadaynnLAelllk 25 
                 +++  e++P+ a+a+  L+ l+++
  EPX73075.1 383 FERITEQHPKCAEALIILGCLYAS 406
                 89999*****************84 PP

  == domain 6  score: 4.3 bits;  conditional E-value: 0.065
      TPR_17  13 adaynnLAelllknGdlmtAr 33 
                 ++++nn ++l +++G++++A+
  EPX73075.1 475 PELLNNIGVLNYHLGNFQEAK 495
                 789****************97 PP

  == domain 7  score: -1.7 bits;  conditional E-value: 5.3
      TPR_17  17 nnLAelllknGdl 29 
                 +nLA++ +++G+ 
  EPX73075.1 518 FNLARCEEELGNI 530
                 7*******99986 PP

  == domain 8  score: 1.5 bits;  conditional E-value: 0.5
      TPR_17   1 lylkaleldPnnadayn 17 
                 ly+k l+l P+ ada  
  EPX73075.1 536 LYTKILDLQPSFADARV 552
                 7*************976 PP

  == domain 9  score: 2.1 bits;  conditional E-value: 0.32
      TPR_17   4 kaleldPnnadaynnLAelllkn 26 
                 + l++ +++ +++ +L++++ ++
  EPX73075.1 609 QTLRHWHDDIYSLVQLGNAYMRQ 631
                 5688999*************854 PP

  == domain 10  score: 11.8 bits;  conditional E-value: 0.00026
      TPR_17   2 ylkaleldPnnadaynnLAelllknGdlmtA 32 
                 y +a++ dP+na a +  A+++++  ++ +A
  EPX73075.1 657 YDQAIKFDPKNAHAAQGIAVTFAHSRQFSKA 687
                 99********************999887776 PP

  == domain 11  score: 1.0 bits;  conditional E-value: 0.73
      TPR_17  11 nnadaynnLAelllknGdlmtA 32 
                 +++  + n +++l++++++ +A
  EPX73075.1 699 KDVTTLINIGNCLAELKQFSRA 720
                 5788999**********99887 PP

  == domain 12  score: -1.7 bits;  conditional E-value: 5
      TPR_17  16 ynnLAelllknGdl 29 
                 +n L++++l++G+ 
  EPX73075.1 740 LNCLGRVWLQRGRE 753
                 899******99975 PP

>> TPR_MalT  MalT-like TPR region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.0    0.0019       1.9     158     238 ..     172     245 ..     154     261 .. 0.69
   2 !   23.0   0.0   4.6e-08   4.6e-05      44     269 ..     330     543 ..     322     561 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0019
    TPR_MalT 158 eaaldayvllarialaqGdleeAetllekaeelaresnfhvdwlanaeevrvrlwlaqgdlaaaerwleaaelpsdddnhf 238
                 ea + a++  ari +++G+ ++A++l ++a  l+ + +++ d +     + + +w +  + +a+ +w++a el+++  nhf
  EPX73075.1 172 EANVFALIGKARILYSRGNFRGALKLYQRA--LVSNPQIQPDPRIG---IGLCFWNLNMKDDALAAWVRAKELDQN--NHF 245
                 555667777788888888888888888876..45555666666644...677778888888888888888876654..555 PP

  == domain 2  score: 23.0 bits;  conditional E-value: 4.6e-08
    TPR_MalT  44 avlGeasllqGdleaAlqalqeaeklarqadslhvallallqqaeilvaqGrLheAletyeqalqlateqglqqlplvgfllvlladllyEwndLeeAe 142
                 + +G+a++   + e+A   +q a+++ ++       ll++l++++i++ q++L  A  t+e++++  + ++ ++l + g+l+++ a     + d+++ +
  EPX73075.1 330 FWMGRAYHQMQNYEKAMTCYQRARSVEDR------HLLSFLGIGQIQILQNDLTSAKLTFERITE-QHPKCAEALIILGCLYASEA-----KSDFTKPR 416
                 56788888777777777777776666633......48999***********************99.777888889******99955.....79****** PP

    TPR_MalT 143 qhlqeGielleqlepeaald..ayvllarialaqGdleeAetllekaeelaresnfhvdwlanaeevrvrlwlaqgdlaaaerwleaaelpsdd.dnhf 238
                   l+++  l+ + +  + +d   y++ ar+ + ++d +++++ l++a+ +++++++++   + +  + v+   + g+ ++a++  +aa ++++d d  +
  EPX73075.1 417 MLLDRAFNLIGSSKIPRVVDsdLYITQARL-WEKEDTKKSLSFLQRAQDFLKSAHISIHP-ELLNNIGVL-NYHLGNFQEAKDYFSAARKEDQDvDPEI 512
                 *********999988888862266666665.6799********************97554.566889985.679**************88877725688 PP

    TPR_MalT 239 lelelrnlarvllalgrydeAlellerLlka 269
                 l +   nlar++ +lg+ d  +el +++l+ 
  EPX73075.1 513 LLVLDFNLARCEEELGNIDLSMELYTKILDL 543
                 888899***********99999999888765 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0    0.0049       4.9      14      76 ..     166     230 ..     153     234 .. 0.72
   2 !    7.3   0.3    0.0055       5.5       5      81 ..     271     351 ..     268     352 .. 0.77
   3 ?    5.9   0.0     0.015        14      26      57 ..     329     361 ..     301     386 .. 0.77
   4 ?    5.9   0.1     0.015        15       2      60 ..     339     395 ..     338     407 .. 0.76
   5 ?   -1.8   0.0       3.8   3.8e+03      34      48 ..     486     500 ..     460     515 .. 0.61
   6 !    9.1   0.0    0.0015       1.4       3      80 ..     648     725 ..     646     727 .. 0.87

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0049
                 HHH.HHH--HHHHHHH...HHHHHHTT-HHHHHHHHHCT.SHHHC-H.HHHHHHHHHHHHTT-HHHHH CS
      ANAPC3  14 rllaaetespedayll...AlclylngqykrAyellrka.klnsksl.gcrylfAqcllkLkkyeeAi 76 
                  +l   ++s+ ++++l   A  ly++g++  A++l+++a  +n++ +   r+ ++ c   L+  ++A+
  EPX73075.1 166 FVL---QRSEANVFALigkARILYSRGNFRGALKLYQRAlVSNPQIQpDPRIGIGLCFWNLNMKDDAL 230
                 555...7888899998888*******************966666665455555555555666666666 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0055
                 HHHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SH.HHC-H..HHHHHHHHHHHHTT-HHHHHHHH-S CS
      ANAPC3   5 yknAiflaerllaaetespedayllAlclylngqykrAyellrka.kl.nsksl..gcrylfAqcllkLkkyeeAiaaLek 81 
                 y +A+ +   +++a++ +p ++  lA   y+    + +++l+++  ++  s sl     + +++++ ++++ye+A +++++
  EPX73075.1 271 YGEALRYTQAAFKAMPSDPVSSCILASYVYSKRSLDGCIKLANTVvQSsFSPSLvaDGYFWMGRAYHQMQNYEKAMTCYQR 351
                 667788888888999***********9999999999999999988533033333644445566999*********999876 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.015
                 HHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HH CS
      ANAPC3  26 ayllAlclylngqykrAyellrka.klnskslg 57 
                  ++ + ++ ++++y++A++ +++a   ++++l 
  EPX73075.1 329 YFWMGRAYHQMQNYEKAMTCYQRArSVEDRHLL 361
                 789999999999999999999999666666654 PP

  == domain 4  score: 5.9 bits;  conditional E-value: 0.015
                 TT-HHHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCTSHHHC-HHHHH CS
      ANAPC3   2 qnnyknAiflaerllaaetespedayllAlclylngqykrAyellrkaklnskslgcry 60 
                 ++ny++A+ ++ r+ + e +++ + +  ++   l+++ ++A   +++    +++++c+ 
  EPX73075.1 339 MQNYEKAMTCYQRARSVEDRHLLSFLGIGQIQILQNDLTSAKLTFERI--TEQHPKCAE 395
                 689999****999994444444444446********************..777777753 PP

  == domain 5  score: -1.8 bits;  conditional E-value: 3.8
                 HHTT-HHHHHHHHHC CS
      ANAPC3  34 ylngqykrAyellrk 48 
                 y++g++++A ++++ 
  EPX73075.1 486 YHLGNFQEAKDYFSA 500
                 444555555544444 PP

  == domain 6  score: 9.1 bits;  conditional E-value: 0.0015
                 T-HHHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCTSHHHC-HHHHHHHHHHHHHTT-HHHHHHHH- CS
      ANAPC3   3 nnyknAiflaerllaaetespedayllAlclylngqykrAyellrkaklnskslgcrylfAqcllkLkkyeeAiaaLe 80 
                 + y +A+  ++ + + +++++ +a   A ++ ++ q+ +A+ +l k ++  k+   ++ ++ cl +Lk++  A  ++e
  EPX73075.1 648 KLYIKAVQSYDQAIKFDPKNAHAAQGIAVTFAHSRQFSKALLILGKIRESIKDVTTLINIGNCLAELKQFSRATEIFE 725
                 566667777778888888889999999********************999999***************9999888776 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.018        18      15      61 ..     161     207 ..     152     214 .. 0.74
   2 ?    4.6   0.0     0.036        36       4      65 ..     335     396 ..     332     403 .. 0.76
   3 !    8.7   0.0    0.0019       1.9      28      56 ..     474     502 ..     445     515 .. 0.88
   4 ?    0.1   0.0      0.94   9.4e+02       8      49 ..     647     688 ..     644     691 .. 0.86
   5 ?   -0.3   0.0       1.3   1.2e+03      35      62 ..     707     734 ..     699     740 .. 0.82
   6 ?   -2.1   0.0       4.6   4.6e+03      18      39 ..     838     859 ..     837     869 .. 0.74

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.018
       TPR_9  15 lavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapd 61 
                 l++ + +l+     +  +   +++l+ +G++++Al+  +++l  +p+
  EPX73075.1 161 LRCFDFVLQRSEANVFALIGKARILYSRGNFRGALKLYQRALVSNPQ 207
                 6666666666666666666789*******************966663 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.036
       TPR_9   4 iaireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapdapda 65 
                 ++ + +++e+a+ +++r   +  ++    +  G+++  +++l  A   +e+  ++ p+ ++a
  EPX73075.1 335 AYHQMQNYEKAMTCYQRARSVEDRHLLSFLGIGQIQILQNDLTSAKLTFERITEQHPKCAEA 396
                 57788888888888888888888888888888888888888888888888888877766655 PP

  == domain 3  score: 8.7 bits;  conditional E-value: 0.0019
       TPR_9  28 dpeerrdRGlllaqlGclsaAladLeayl 56 
                 +pe++   G+l+++lG++++A + + a+ 
  EPX73075.1 474 HPELLNNIGVLNYHLGNFQEAKDYFSAAR 502
                 78999999**************9998875 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 0.94
       TPR_9   8 eedweralavverllllaPddpeerrdRGlllaqlGclsaAl 49 
                 ++ + +a + ++  + ++P+ ++     ++  a++ ++s+Al
  EPX73075.1 647 QKLYIKAVQSYDQAIKFDPKNAHAAQGIAVTFAHSRQFSKAL 688
                 566678999999999999999999999999999999999996 PP

  == domain 5  score: -0.3 bits;  conditional E-value: 1.3
       TPR_9  35 RGlllaqlGclsaAladLeaylalapda 62 
                  G +la+l ++s A + +e+ +++++++
  EPX73075.1 707 IGNCLAELKQFSRATEIFETVISMTGED 734
                 5788999*********999999988876 PP

  == domain 6  score: -2.1 bits;  conditional E-value: 4.6
       TPR_9  18 verllllaPddpeerrdRGlll 39 
                 +e ++ +a ++ + r++R+l +
  EPX73075.1 838 IEQRVKMATNTTRKRLERALQQ 859
                 6777888888888899998744 PP

>> RPN7  26S proteasome subunit RPN7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.3   0.00063      0.62      53     107 ..      75     129 ..      71     171 .. 0.85
   2 ?   -1.4   0.0       1.7   1.6e+03      42      63 ..     181     202 ..     171     225 .. 0.73
   3 ?    2.1   0.0      0.14   1.4e+02      41      64 ..     331     354 ..     307     386 .. 0.88
   4 ?   -0.2   0.0       0.7     7e+02      88     140 ..     451     502 ..     445     546 .. 0.76
   5 ?   -1.1   0.1       1.3   1.3e+03      96     145 ..     650     700 ..     604     727 .. 0.64

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00063
                 HHHHHHHHTCCCC--SHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHCSSS--- CS
        RPN7  53 eeAlkaysrireyctslkhkidmllnlirvaiffndwdlvskylekakellekgg 107
                 ++Al+ ++ +  +c    ++ +++l+l+r ai+ +d    +++l+ ++++le + 
  EPX73075.1  75 TSALNVLKDTDSQCLINANICSIYLHLTRHAIWKQDNVARDQHLQNVRTYLEAAN 129
                 689*************************************************954 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1.7
                 HHHHHHHCT-HHHHHHHHHTCC CS
        RPN7  42 laehYlkigdleeAlkaysrir 63 
                 +a+  ++ g+++ Alk+y+r++
  EPX73075.1 181 KARILYSRGNFRGALKLYQRAL 202
                 78888999************64 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.14
                 HHHHHHHHCT-HHHHHHHHHTCCC CS
        RPN7  41 dlaehYlkigdleeAlkaysrire 64 
                   ++ Y+++ ++e+A+ +y+r+r 
  EPX73075.1 331 WMGRAYHQMQNYEKAMTCYQRARS 354
                 567889***************985 PP

  == domain 4  score: -0.2 bits;  conditional E-value: 0.7
                 -HHHHHHHHHHHHCSSS---.HHHHHHHHHHHHHHHHHTT-HHHHHHHHCTS- CS
        RPN7  88 dwdlvskylekakellekggdwerknrlkvyeGlallairkfkeAaellldil 140
                 d ++  ++l++a++ l++++  + +  l    G+++ + ++f+eA + + ++ 
  EPX73075.1 451 DTKKSLSFLQRAQDFLKSAH-ISIHPELLNNIGVLNYHLGNFQEAKDYFSAAR 502
                 56666677777777777754.67777777777777777777777777776654 PP

  == domain 5  score: -1.1 bits;  conditional E-value: 1.3
                 HHHHHCSSS---.HHHHHHHHHHHHHH..HHHTT-HHHHHHHHCTS-GGGT. CS
        RPN7  96 lekakellekggdwerknrlkvyeGla..llairkfkeAaellldilstfts 145
                   ka ++++++ + + kn  ++++G+a   ++ r+f++A   l +i +++++
  EPX73075.1 650 YIKAVQSYDQAIKFDPKN-AHAAQGIAvtFAHSRQFSKALLILGKIRESIKD 700
                 334444444444444444.777777763346777888888777777766654 PP

>> DNA_pol3_tau_5  DNA polymerase III tau subunit V interacting with alpha
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.2   0.00034      0.33       5      46 ..      35      78 ..      31     127 .. 0.81
   2 ?    2.1   1.6      0.18   1.8e+02      64     110 ..     843     889 ..     838     910 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00034
                    -SSHHHHHHHHHHHHHH-HHHHHHHHHT--SHHHH..HHHTEEE CS
  DNA_pol3_tau_5  5 ektpelaaklieealerdeWaaeieklklpklvkq..lalnsvl 46
                    e   el++ l +e +erd W++  ++ ++++l+ q   +l s+l
      EPX73075.1 35 EDATELVEILTNEQAERDLWTKFAREYHIRSLSSQalFILTSAL 78
                    6778****************************999332344444 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.18
                     TT--HHHHHHHHHHHHHHHSS--EEEEEE---TSS--HHHHHHHHHH CS
  DNA_pol3_tau_5  64 hLnsdsaqkeLaeaLsellgkeveleitldddeeqkTPlelrqaiye 110
                     ++ +++++k L+ aL+++ + e+++ ++l++ + ++   + r+   e
      EPX73075.1 843 KMATNTTRKRLERALQQQSEYEASVAVKLGEAKLNREKEKARRLAEE 889
                     5678899**********************998876555555554444 PP

>> TPR_3  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.52   5.2e+02      10      25 ..     184     199 ..     175     202 .. 0.85
   2 ?    5.3   0.3      0.02        20      10      25 ..     335     350 ..     329     351 .. 0.91
   3 ?    2.9   0.4      0.11   1.1e+02      12      35 ..     486     504 ..     484     505 .. 0.82
   4 ?    1.1   0.1      0.42   4.2e+02      14      36 .]     647     667 ..     646     667 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.52
                 HHHHTT-HHHHHHH.. CS
       TPR_3  10 efynkkkyqeArelfs 25 
                  +y+ +++  A+ l++
  EPX73075.1 184 ILYSRGNFRGALKLYQ 199
                 68999*********88 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.02
                 HHHHTT-HHHHHHH.. CS
       TPR_3  10 efynkkkyqeArelfs 25 
                 +++++++y++A   ++
  EPX73075.1 335 AYHQMQNYEKAMTCYQ 350
                 79*********99987 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.11
                 HHTT-HHHHHHH..HHHHHHH-TT CS
       TPR_3  12 ynkkkyqeArelfsYallaildke 35 
                 y  +++qeA ++fs     + +ke
  EPX73075.1 486 YHLGNFQEAKDYFS-----AARKE 504
                 6679*********9.....66666 PP

  == domain 4  score: 1.1 bits;  conditional E-value: 0.42
                 TT-HHHHHHH..HHHHHHH-TT- CS
       TPR_3  14 kkkyqeArelfsYallaildken 36 
                 +k y +A++ ++  ++ + d++n
  EPX73075.1 647 QKLYIKAVQSYD--QAIKFDPKN 667
                 677999999976..999999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1066 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2281  (0.127224); expected 358.6 (0.02)
Passed bias filter:                      648  (0.0361426); expected 358.6 (0.02)
Passed Vit filter:                        99  (0.00552178); expected 17.9 (0.001)
Passed Fwd filter:                        26  (0.00145016); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 1.05u 0.32s 00:00:01.37 Elapsed: 00:00:00.49
# Mc/sec: 6517.50
//
Query:       EPX73076.1  [L=273]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      4e-21   75.1   5.4      4e-21   75.1   5.4    3.0  4  DUF1774   Fungal protein of unknown function (DUF1774)


Domain annotation for each model (and alignments):
>> DUF1774  Fungal protein of unknown function (DUF1774)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1      0.14   2.6e+03      32      54 ..      13      38 ..       7      56 .. 0.73
   2 ?    1.0   2.0     0.031   5.5e+02      31      73 ..      61     105 ..      50     113 .. 0.76
   3 ?   -0.1   2.0     0.068   1.2e+03       8      40 ..      90     122 ..      83     167 .. 0.79
   4 !   75.1   5.4   2.2e-25     4e-21       1      95 []     172     260 ..     172     260 .. 0.97

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.14
     DUF1774 32 slLslalgvgQlltkvia...lQwif 54
                s+Lsl+++++ ll ++++   l w++
  EPX73076.1 13 SVLSLGISFSALLAHIFSspsLPWVY 38
                78888888888888887422255555 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.031
     DUF1774  31 lslLslalgvgQlltkv..ialQwifafviaavlfvlslvvavak 73 
                 ls+Ls+ + +  l  +v  +++  i + +   +lfvl+++++v++
  EPX73076.1  61 LSFLSMNIPLLLLGDQVndFTFSIIHSSIWYNILFVLTIILFVRE 105
                 677777777777777775567777888888899999999988765 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.068
     DUF1774   8 iwailvvglffivaykDytlgfslslLslalgv 40 
                  ++il+v ++++++ +  + +  lsl  ++ ++
  EPX73076.1  90 WYNILFVLTIILFVREKLYWTALLSLFLFSTAF 122
                 356777777777777777777777777777665 PP

  == domain 4  score: 75.1 bits;  conditional E-value: 2.2e-25
     DUF1774   1 RilaNvfiwailvvglffivaykDytlgfslslLslalgvgQlltkvialQwifafviaavlfvlslvvavakllgreeeaeeessedkeraPLL 95 
                 R+++Nvfiw + +++l+ i+ ++D++l++ +++L+ a+gvgQl+++++alQ+ifaf+i ++++++++++++  +++r+      +s + e+aPLL
  EPX73076.1 172 RVFSNVFIWFVAILYLAPILGFHDWALSLISAYLFGAIGVGQLFIHLFALQHIFAFIICGLMILFAVLLFFLPYRQRR------ASLTGESAPLL 260
                 9**************************************************************************999......56789999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (273 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       813  (0.0453455); expected 358.6 (0.02)
Passed bias filter:                      219  (0.0122148); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.45
# Mc/sec: 1822.96
//
Query:       EPX73077.1  [L=859]
Description: cargo-transporter Ypp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-12   46.3  15.2     0.0024   17.8   0.3    6.9  6  TPR_2     Tetratricopeptide repeat
    1.2e-09   38.6   0.3    1.9e-05   25.2   0.5    3.8  4  TPR_16    Tetratricopeptide repeat
    1.5e-08   35.0   6.0      0.015   15.8   0.6    5.2  6  TPR_19    Tetratricopeptide repeat
    4.9e-08   33.1   1.6        0.3   12.0   0.3    5.3  5  TPR_14    Tetratricopeptide repeat
    2.4e-07   30.3   2.0     0.0084   15.8   0.0    4.0  3  TPR_11    TPR repeat
      1e-06   28.3  16.3      0.032   14.1   0.1    6.4  7  TPR_1     Tetratricopeptide repeat
    1.1e-06   28.3  16.7       0.27   11.6   0.1    6.1  6  TPR_8     Tetratricopeptide repeat
    1.6e-05   25.1  11.4     0.0092   16.2   0.2    4.8  5  ANAPC3    Anaphase-promoting complex, cyclosome, subunit 3
    0.00038   20.6  10.3       0.25   11.8   0.0    6.1  6  TPR_17    Tetratricopeptide repeat
    0.00048   20.2   5.5      0.017   15.3   0.1    4.2  5  TPR_9     Tetratricopeptide repeat
     0.0015   17.8   1.4        0.3   10.2   0.2    3.4  3  TPR_15    Tetratricopeptide repeat
  ------ inclusion threshold ------
        5.8    7.8   8.2         16    6.4   0.5    4.6  6  TPR_6     Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.1      0.42   6.2e+02      15      25 ..     356     366 ..     351     367 .. 0.85
   2 !    9.6   0.0   0.00073       1.1      14      34 .]     473     493 ..     471     493 .. 0.92
   3 ?    5.0   0.0      0.02        30       3      34 .]     496     527 ..     494     527 .. 0.96
   4 !    9.9   0.4   0.00056      0.83       2      31 ..     701     730 ..     700     733 .. 0.91
   5 !    7.8   0.0    0.0026       3.9       4      34 .]     737     767 ..     734     767 .. 0.91
   6 !   17.8   0.3   1.6e-06    0.0024       1      34 []     808     841 ..     808     841 .. 0.95

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.42
       TPR_2  15 gdyeeAleafe 25 
                  +yeeA++af+
  EPX73077.1 356 EEYEEAHQAFQ 366
                 68******997 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00073
       TPR_2  14 lgdyeeAleafekAleldPnn 34 
                 + ++ee + +++k le++P+n
  EPX73077.1 473 KEKHEESIFCYKKILEIEPDN 493
                 6789***************98 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.02
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldPnn 34 
                 aly l++ ++++ +   A+e  +  l++ Pn+
  EPX73077.1 496 ALYHLAMQLAEKREIVSAIETVRYLLKISPNY 527
                 89****************************96 PP

  == domain 4  score: 9.9 bits;  conditional E-value: 0.00056
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleld 31 
                 +++   +++  k+++y++A+ a+ +A +l+
  EPX73077.1 701 KLWLTAANLFVKSKQYDQARGALLEAKKLN 730
                 579999**********************98 PP

  == domain 5  score: 7.8 bits;  conditional E-value: 0.0026
       TPR_2   4 lynlGlayyklgdyeeAleafekAleldPnn 34 
                 +   Gl+++++++ +eA e  e A  ldP++
  EPX73077.1 737 HLVYGLSLLAQNREKEAMEQIELAMYLDPHD 767
                 55689************************86 PP

  == domain 6  score: 17.8 bits;  conditional E-value: 1.6e-06
       TPR_2   1 aealynlGlayyklgdyeeAleafekAleldPnn 34 
                 +ea+++ +++y +lgd ++A+ +++ +++l  +n
  EPX73077.1 808 PEAWFYSAELYQQLGDEKQAAFCYDYCIQLSDTN 841
                 69***************************98776 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0     0.013        19      20      67 ..     483     527 ..     473     528 .. 0.89
   2 ?   -3.0   0.0       8.4   1.2e+04      11      27 ..     543     559 ..     542     559 .. 0.83
   3 !   25.2   0.5   1.3e-08   1.9e-05       1      68 []     704     768 ..     704     768 .. 0.89
   4 ?    2.2   0.0      0.19   2.9e+02      32      54 ..     806     828 ..     790     835 .. 0.88

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.013
      TPR_16  20 leaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalraapda 67 
                 ++  l+     Pd+  Al++l+  ++++ +   A++ +r +l+ +p++
  EPX73077.1 483 YKKILEIE---PDNETALYHLAMQLAEKREIVSAIETVRYLLKISPNY 527
                 66677777...999******************************9986 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 8.4
      TPR_16  11 gdyddAaaaleaalkrd 27 
                  +yd A++ ++ +l+++
  EPX73077.1 543 EQYDSALKIADSVLESW 559
                 58999999999999886 PP

  == domain 3  score: 25.2 bits;  conditional E-value: 1.3e-08
      TPR_16   1 lalaraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalraapdap 68 
                 l +a++++++++yd+A+ al +a k++++sP     +l +g+++l+q+r +eA ++++ a   +p +p
  EPX73077.1 704 LTAANLFVKSKQYDQARGALLEAKKLNADSPG---LHLVYGLSLLAQNREKEAMEQIELAMYLDPHDP 768
                 578************************77777...*******************77777666777776 PP

  == domain 4  score: 2.2 bits;  conditional E-value: 0.19
      TPR_16  32 daaeAllllgdaalrqgrlaeAa 54 
                 d +eA++++++++ ++g+ + Aa
  EPX73077.1 806 DLPEAWFYSAELYQQLGDEKQAA 828
                 5789*************988886 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.0     8e-05      0.12       7      64 ..     476     535 ..     472     539 .. 0.87
   2 ?    5.6   0.0     0.015        23       5      53 ..     508     557 ..     504     558 .. 0.82
   3 ?   -0.6   0.0       1.3     2e+03       5      19 ..     543     557 ..     541     573 .. 0.81
   4 !   13.9   0.1   3.9e-05     0.058      22      62 ..     697     737 ..     679     742 .. 0.79
   5 !   15.8   0.6   9.8e-06     0.015       3      61 ..     712     770 ..     710     777 .. 0.91
   6 ?    2.1   0.1      0.18   2.7e+02      25      47 ..     808     830 ..     799     833 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 8e-05
      TPR_19   7 yaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpd.d.aryasL 64 
                 ++e +  ++++l+ +p+n+ a++ LA  l +  ++  A++++  l++  p+ + ++++ L
  EPX73077.1 476 HEESIFCYKKILEIEPDNETALYHLAMQLAEKREIVSAIETVRYLLKISPNySiSAWHLL 535
                 56666779******************************************9766776665 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.015
      TPR_19   5 gdyaeAlalleqalqedpknaearllLAeallal.gqldeAealLdalpe 53 
                     +A++  +++l+ +p+++  +  L ++ll+   q+d A ++ d ++e
  EPX73077.1 508 REIVSAIETVRYLLKISPNYSISAWHLLILLLSCsEQYDSALKIADSVLE 557
                 567789*************8888887777777776********9999887 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 1.3
      TPR_19   5 gdyaeAlalleqalq 19 
                 ++y++Al++  ++l+
  EPX73077.1 543 EQYDSALKIADSVLE 557
                 689999999888876 PP

  == domain 4  score: 13.9 bits;  conditional E-value: 3.9e-05
      TPR_19  22 pknaearllLAeallalgqldeAealLdalpeedpddarya 62 
                 + n+ ++l  A++ ++++q+d+A+ +L ++ + ++d++ ++
  EPX73077.1 697 AFNQKLWLTAANLFVKSKQYDQARGALLEAKKLNADSPGLH 737
                 4488899999**********************999987666 PP

  == domain 5  score: 15.8 bits;  conditional E-value: 9.8e-06
      TPR_19   3 aegdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpddary 61 
                 ++++y++A  +l +a + +++++ + l +   lla+++ +eA++ ++ ++  dp d+ +
  EPX73077.1 712 KSKQYDQARGALLEAKKLNADSPGLHLVYGLSLLAQNREKEAMEQIELAMYLDPHDPII 770
                 789*******************************************9999999988755 PP

  == domain 6  score: 2.1 bits;  conditional E-value: 0.18
      TPR_19  25 aearllLAeallalgqldeAeal 47 
                 +ea+ + Ae++ +lg+ ++A  +
  EPX73077.1 808 PEAWFYSAELYQQLGDEKQAAFC 830
                 6889999************9765 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       8.8   1.3e+04       7      25 ..     348     366 ..     345     368 .. 0.79
   2 !    9.3   0.0    0.0015       2.3      15      42 ..     474     501 ..     471     502 .. 0.92
   3 ?    3.3   0.0      0.13   1.9e+02       3      29 ..     531     557 ..     529     561 .. 0.90
   4 !   12.0   0.3    0.0002       0.3       3      42 ..     702     741 ..     701     768 .. 0.97
   5 ?    2.3   0.0      0.26   3.9e+02       1      24 [.     808     831 ..     808     842 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 8.8
      TPR_14   7 laeallalGdpdeAiallr 25 
                 l+ +l + ++++eA ++++
  EPX73077.1 348 LVILLTHIEEYEEAHQAFQ 366
                 6777888889999999886 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.0015
      TPR_14  15 GdpdeAiallrralalaPddaeawllla 42 
                 ++++e+i +++++l+  Pd+++a+++la
  EPX73077.1 474 EKHEESIFCYKKILEIEPDNETALYHLA 501
                 6799**********************98 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.13
      TPR_14   3 allalaeallalGdpdeAiallrrala 29 
                 a+ +l  +l  ++++d A+++++ +l+
  EPX73077.1 531 AWHLLILLLSCSEQYDSALKIADSVLE 557
                 8999999**************999886 PP

  == domain 4  score: 12.0 bits;  conditional E-value: 0.0002
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddaeawllla 42 
                 ++l +a ++  + ++d+A+ +l +a +l+ d++ ++l ++
  EPX73077.1 702 LWLTAANLFVKSKQYDQARGALLEAKKLNADSPGLHLVYG 741
                 89**********************************9987 PP

  == domain 5  score: 2.3 bits;  conditional E-value: 0.26
      TPR_14   1 peallalaeallalGdpdeAiall 24 
                 pea+   ae++ +lGd ++A+ ++
  EPX73077.1 808 PEAWFYSAELYQQLGDEKQAAFCY 831
                 799*************99998666 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   5.6e-06    0.0084       7      35 ..     473     501 ..     471     503 .. 0.94
   2 !   10.6   0.3   0.00023      0.35       2      40 ..     708     746 ..     707     748 .. 0.89
   3 ?   -0.5   0.0       0.7     1e+03      26      42 .]     806     822 ..     805     822 .. 0.92

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 5.6e-06
      TPR_11   7 qGkyeeAieaYkkAlkldPdnaeayynLG 35 
                 + k ee+i +Ykk l++ Pdn +a+y+L+
  EPX73077.1 473 KEKHEESIFCYKKILEIEPDNETALYHLA 501
                 6799***********************97 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00023
      TPR_11   2 dayyeqGkyeeAieaYkkAlkldPdnaeayynLGlayyk 40 
                 +++++  +y++A  a+ +A kl+ d++ +++  Gl +++
  EPX73077.1 708 NLFVKSKQYDQARGALLEAKKLNADSPGLHLVYGLSLLA 746
                 899**************************9977777665 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.7
      TPR_11  26 dnaeayynLGlayykqG 42 
                 d +ea++  +++y+++G
  EPX73077.1 806 DLPEAWFYSAELYQQLG 822
                 679************98 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1         1   1.5e+03      13      25 ..     354     366 ..     350     366 .. 0.80
   2 !   14.1   0.1   2.2e-05     0.032      14      34 .]     473     493 ..     471     493 .. 0.93
   3 ?   -0.6   0.0      0.91   1.4e+03       3      34 .]     496     527 ..     495     527 .. 0.84
   4 ?   -2.1   0.0       2.7     4e+03       3      22 ..     531     550 ..     530     555 .. 0.75
   5 ?    4.8   0.2     0.018        27       7      31 ..     706     730 ..     701     733 .. 0.85
   6 ?    2.0   0.1      0.14     2e+02       8      34 .]     741     767 ..     741     767 .. 0.94
   7 !   13.1   0.4   4.2e-05     0.063       1      32 [.     808     839 ..     808     841 .. 0.92

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 1
                 HTT-HHHHHHHHH CS
       TPR_1  13 klgkydeAleyye 25 
                 + ++y+eA ++++
  EPX73077.1 354 HIEEYEEAHQAFQ 366
                 6689****99997 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 2.2e-05
                 TT-HHHHHHHHHHHHHHSTTH CS
       TPR_1  14 lgkydeAleyyekALelnPnn 34 
                 ++k++e + +y+k Le++P+n
  EPX73077.1 473 KEKHEESIFCYKKILEIEPDN 493
                 689****************98 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.91
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   3 alynlGnayfklgkydeAleyyekALelnPnn 34 
                 aly l++ + ++ +   A+e  +  L++ Pn+
  EPX73077.1 496 ALYHLAMQLAEKREIVSAIETVRYLLKISPNY 527
                 8999***9999999999999877777777775 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 2.7
                 HHHHHHHHHHHTT-HHHHHH CS
       TPR_1   3 alynlGnayfklgkydeAle 22 
                 a+  l +++   ++yd Al+
  EPX73077.1 531 AWHLLILLLSCSEQYDSALK 550
                 66667777777788888886 PP

  == domain 5  score: 4.8 bits;  conditional E-value: 0.018
                 HHHHHHHTT-HHHHHHHHHHHHHHS CS
       TPR_1   7 lGnayfklgkydeAleyyekALeln 31 
                  +n++ k ++yd+A  +  +A +ln
  EPX73077.1 706 AANLFVKSKQYDQARGALLEAKKLN 730
                 58999***********999999998 PP

  == domain 6  score: 2.0 bits;  conditional E-value: 0.14
                 HHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   8 GnayfklgkydeAleyyekALelnPnn 34 
                 G+ ++ +++ +eA e  e A  l+P++
  EPX73077.1 741 GLSLLAQNREKEAMEQIELAMYLDPHD 767
                 78999********************86 PP

  == domain 7  score: 13.1 bits;  conditional E-value: 4.2e-05
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHST CS
       TPR_1   1 akalynlGnayfklgkydeAleyyekALelnP 32 
                 ++a++  + +y++lg+ ++A  +y+ +++l  
  EPX73077.1 808 PEAWFYSAELYQQLGDEKQAAFCYDYCIQLSD 839
                 589*************************9975 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1       2.9   4.4e+03      11      31 ..      29      49 ..      27      50 .. 0.84
   2 !   11.6   0.1   0.00018      0.27      14      34 .]     473     493 ..     471     493 .. 0.93
   3 ?   -2.5   0.0       5.7   8.6e+03       3      33 ..     496     526 ..     495     527 .. 0.71
   4 !    6.6   0.3     0.007        10       2      33 ..     701     732 ..     700     733 .. 0.93
   5 !    7.0   0.0    0.0054         8       7      33 ..     740     766 ..     735     767 .. 0.89
   6 !   11.1   0.2   0.00026      0.39       2      32 ..     809     839 ..     808     841 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 2.9
                HHHTT-HHHHHHHHHHHHHHH CS
       TPR_8 11 ylklgdyeeAkeyyekaleld 31
                 +kl++++ +k+y+ +  +++
  EPX73077.1 29 ARKLNKHNPSKSYICELAKIE 49
                6799*********99988875 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 0.00018
                 TT-HHHHHHHHHHHHHHHHH. CS
       TPR_8  14 lgdyeeAkeyyekaleldpdn 34 
                 ++++ee++ +y+k le++pdn
  EPX73077.1 473 KEKHEESIFCYKKILEIEPDN 493
                 789****************97 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 5.7
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyekaleldpd 33 
                 a+y+l++ + ++ ++ +A+e+ +  l+++p+
  EPX73077.1 496 ALYHLAMQLAEKREIVSAIETVRYLLKISPN 526
                 5667776666666666788888888888887 PP

  == domain 4  score: 6.6 bits;  conditional E-value: 0.007
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldpd 33 
                 ++++  +++  k ++y++A  ++ +a +l+ d
  EPX73077.1 701 KLWLTAANLFVKSKQYDQARGALLEAKKLNAD 732
                 57999***********************9986 PP

  == domain 5  score: 7.0 bits;  conditional E-value: 0.0054
                 HHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   7 lgsiylklgdyeeAkeyyekaleldpd 33 
                  g+ +l +++ +eA+e +e a +ldp 
  EPX73077.1 740 YGLSLLAQNREKEAMEQIELAMYLDPH 766
                 7889999******************97 PP

  == domain 6  score: 11.1 bits;  conditional E-value: 0.00026
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldp 32 
                 ea++  + +y++lgd ++A  +y  +++l+ 
  EPX73077.1 809 EAWFYSAELYQQLGDEKQAAFCYDYCIQLSD 839
                 7888899*****************9999975 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1       2.7     4e+03      40      79 ..     322     365 ..     316     368 .. 0.60
   2 !   11.0   0.4   0.00026      0.39       2      54 ..     473     526 ..     472     555 .. 0.81
   3 ?    2.4   0.1      0.12   1.9e+02      18      49 ..     524     555 ..     513     573 .. 0.78
   4 !   16.2   0.2   6.2e-06    0.0092      28      77 ..     703     755 ..     691     759 .. 0.90
   5 ?    0.5   0.1      0.48   7.1e+02      23      49 ..     808     834 ..     794     842 .. 0.68

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 2.7
                 HHHHHHHHCT.SHHHC-HHHHHHHH..HHHH.HTT-HHHHHHHH CS
      ANAPC3  40 krAyellrka.klnskslgcrylfA..qcll.kLkkyeeAiaaL 79 
                  +A +l++ +  l +ks  c  +f     ll  +++yeeA +a+
  EPX73077.1 322 MQAVNLINIFyMLTEKSFHCQQIFRslVILLtHIEEYEEAHQAF 365
                 55666666665666666666666654323333668999998877 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00026
                 TT-HHHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC CS
      ANAPC3   2 qnnyknAiflaerllaaetespedayllAlclylngqykrAyellrka.klnsk 54 
                 ++++++ if++ ++l+ e++++ ++y lA  l +  +  +A+e +r + k+ ++
  EPX73077.1 473 KEKHEESIFCYKKILEIEPDNETALYHLAMQLAEKREIVSAIETVRYLlKISPN 526
                 578999**************************************9998665544 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.12
                 HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT CS
      ANAPC3  18 aetespedayllAlclylngqykrAyellrka 49 
                 + ++s ++ +ll l l  ++qy++A++++++ 
  EPX73077.1 524 SPNYSISAWHLLILLLSCSEQYDSALKIADSV 555
                 55677888899999999999999999998876 PP

  == domain 4  score: 16.2 bits;  conditional E-value: 6.2e-06
                 HH..HHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHH CS
      ANAPC3  28 ll..AlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAia 77 
                 +l  A  + +++qy++A   l +a kln  s+g +++++ +ll++++ +eA  
  EPX73077.1 703 WLtaANLFVKSKQYDQARGALLEAkKLNADSPGLHLVYGLSLLAQNREKEAME 755
                 555699999*****************************************976 PP

  == domain 5  score: 0.5 bits;  conditional E-value: 0.48
                 HHHHHHHHHHHHHTT-HHHHHHHHHCT CS
      ANAPC3  23 pedayllAlclylngqykrAyellrka 49 
                 pe+ ++ A+ + ++g+ k+A   ++ +
  EPX73077.1 808 PEAWFYSAELYQQLGDEKQAAFCYDYC 834
                 566677777777777777776666555 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.53   7.9e+02       4      22 ..     440     458 ..     439     472 .. 0.87
   2 !   11.8   0.0   0.00017      0.25       1      28 [.     482     509 ..     482     515 .. 0.86
   3 ?    2.1   0.0      0.21   3.2e+02       6      33 ..     521     549 ..     518     550 .. 0.87
   4 ?    0.4   0.1      0.71   1.1e+03      14      33 ..     701     720 ..     696     721 .. 0.87
   5 ?   -3.1   0.0       9.3   1.4e+04       9      32 ..     730     753 ..     726     755 .. 0.78
   6 ?    6.0   0.1     0.012        17      11      32 ..     806     827 ..     798     828 .. 0.87

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.53
      TPR_17   4 kaleldPnnadaynnLAel 22 
                 ++le+ P+   +++ ++++
  EPX73077.1 440 EFLENSPTFTLVLHAKGVA 458
                 689***********99986 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 0.00017
      TPR_17   1 lylkaleldPnnadaynnLAelllknGd 28 
                 +y+k le++P+n  a++ LA  l+++ +
  EPX73077.1 482 CYKKILEIEPDNETALYHLAMQLAEKRE 509
                 8*******************99987655 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.21
      TPR_17   6 leldPnn.adaynnLAelllknGdlmtAr 33 
                 l++ Pn+   a+++L  ll+   +++ A+
  EPX73077.1 521 LKISPNYsISAWHLLILLLSCSEQYDSAL 549
                 8899996599**********999999987 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.71
      TPR_17  14 daynnLAelllknGdlmtAr 33 
                 +++   A+l+ k +++++Ar
  EPX73077.1 701 KLWLTAANLFVKSKQYDQAR 720
                 6788889************8 PP

  == domain 5  score: -3.1 bits;  conditional E-value: 9.3
      TPR_17   9 dPnnadaynnLAelllknGdlmtA 32 
                 + +++ ++  ++  ll +++ ++A
  EPX73077.1 730 NADSPGLHLVYGLSLLAQNREKEA 753
                 667777888899999999988877 PP

  == domain 6  score: 6.0 bits;  conditional E-value: 0.012
      TPR_17  11 nnadaynnLAelllknGdlmtA 32 
                 + ++a+++ Ael+ ++Gd ++A
  EPX73077.1 806 DLPEAWFYSAELYQQLGDEKQA 827
                 6689**************9887 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1       3.3     5e+03      38      59 ..     351     372 ..     348     381 .. 0.78
   2 ?   -1.7   0.0       2.3   3.4e+03       9      56 ..     474     521 ..     471     528 .. 0.54
   3 ?   -1.6   0.0         2     3e+03       8      22 ..     542     556 ..     538     557 .. 0.88
   4 ?    4.2   0.1     0.032        47      24      63 ..     729     768 ..     702     774 .. 0.60
   5 !   15.3   0.1   1.1e-05     0.017      19      65 ..     798     844 ..     786     846 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 3.3
       TPR_9  38 llaqlGclsaAladLeaylala 59 
                 ll + + +++A ++++ y  l+
  EPX73077.1 351 LLTHIEEYEEAHQAFQLYKFLC 372
                 7889999999999999986555 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 2.3
       TPR_9   9 edweralavverllllaPddpeerrdRGlllaqlGclsaAladLeayl 56 
                 e++e+ + ++  +l + Pd    ++  ++ la+   +  A++   + l
  EPX73077.1 474 EKHEESIFCYKKILEIEPDNETALYHLAMQLAEKREIVSAIETVRYLL 521
                 555555556666666666665555555555555555555555444444 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 2
       TPR_9   8 eedweralavverll 22 
                 +e+++ al++++++l
  EPX73077.1 542 SEQYDSALKIADSVL 556
                 5899********998 PP

  == domain 4  score: 4.2 bits;  conditional E-value: 0.032
       TPR_9  24 laPddpeerrdRGlllaqlGclsaAladLeaylalapdap 63 
                 l+ d+p++++  Gl l  +++ ++A++  e ++ l+p++p
  EPX73077.1 729 LNADSPGLHLVYGLSLLAQNREKEAMEQIELAMYLDPHDP 768
                 5555555555555555555555555555555555555555 PP

  == domain 5  score: 15.3 bits;  conditional E-value: 1.1e-05
       TPR_9  19 erllllaPddpeerrdRGlllaqlGclsaAladLeaylalapdapda 65 
                 e  l+   d pe ++  + l++qlG+ ++A+++ +++++l++ +p +
  EPX73077.1 798 ETTLQYGWDLPEAWFYSAELYQQLGDEKQAAFCYDYCIQLSDTNPIR 844
                 66677778899*****************************9998877 PP

>> TPR_15  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.16   2.4e+02     157     192 ..     471     506 ..     432     576 .. 0.66
   2 !   10.2   0.2    0.0002       0.3     110     191 ..     700     779 ..     696     789 .. 0.83
   3 ?    2.9   0.0     0.035        52     146     178 ..     808     840 ..     789     845 .. 0.82

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.16
      TPR_15 157 rqegqtdaAlrdyreAlalapdsselraallWlliD 192
                 +++ ++++++ +y++ l+ +pd++++   l   l +
  EPX73077.1 471 TRKEKHEESIFCYKKILEIEPDNETALYHLAMQLAE 506
                 566666777777777777777766655444433333 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.0002
      TPR_15 110 prlLssalellerakdydriaellksleeeeaaeqsaafllaraelyrqegqtdaAlrdyreAlalapdsselraallWlli 191
                 ++l+  a +l  ++k+yd+ +  l +  +++  ++s+   l+++ + ++++++++A+++++ A+ l+p +  +  +l+ +l+
  EPX73077.1 700 QKLWLTAANLFVKSKQYDQARGALLE--AKKLNADSPGLHLVYGLSLLAQNREKEAMEQIELAMYLDPHDPIIATTLVKILL 779
                 56778888999999999999988877..4555569**********************************9888888776665 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.035
      TPR_15 146 aafllaraelyrqegqtdaAlrdyreAlalapd 178
                 +  +++ aely+q g++++A  +y   ++l+++
  EPX73077.1 808 PEAWFYSAELYQQLGDEKQAAFCYDYCIQLSDT 840
                 678******************999888887766 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       7.5   1.1e+04      15      32 ..     475     492 ..     472     493 .. 0.82
   2 ?    0.1   0.0       1.1   1.7e+03       2      28 ..     496     522 ..     495     527 .. 0.71
   3 ?   -2.6   0.0       7.8   1.2e+04      15      29 ..     544     558 ..     536     559 .. 0.84
   4 ?    1.5   0.1      0.38   5.7e+02       7      29 ..     707     729 ..     702     733 .. 0.72
   5 ?   -2.1   0.0       5.3   7.9e+03       7      21 ..     741     755 ..     739     759 .. 0.84
   6 ?    6.4   0.5      0.01        16       1      24 [.     809     832 ..     809     837 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 7.5
                 HHHHHHHHHHHHHHH-TT CS
       TPR_6  15 dtdkAlealerlikeYPd 32 
                 ++++++  ++++++  Pd
  EPX73077.1 475 KHEESIFCYKKILEIEPD 492
                 67888999*****99998 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 1.1
                 HHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   2 AlyklalsyrklgdtdkAlealerlik 28 
                 Aly+la+ + +  +   A+e+ + l+k
  EPX73077.1 496 ALYHLAMQLAEKREIVSAIETVRYLLK 522
                 9*****988885577777776555555 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 7.8
                 HHHHHHHHHHHHHHH CS
       TPR_6  15 dtdkAlealerlike 29 
                 ++d Al++ ++++++
  EPX73077.1 544 QYDSALKIADSVLES 558
                 899999999999875 PP

  == domain 4  score: 1.5 bits;  conditional E-value: 0.38
                 HHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   7 alsyrklgdtdkAlealerlike 29 
                 a ++ k +++d+A+ al +  k 
  EPX73077.1 707 ANLFVKSKQYDQARGALLEAKKL 729
                 56667767*******99776665 PP

  == domain 5  score: -2.1 bits;  conditional E-value: 5.3
                 HHHHHHHHHHHHHHH CS
       TPR_6   7 alsyrklgdtdkAle 21 
                 +ls++++++  +A+e
  EPX73077.1 741 GLSLLAQNREKEAME 755
                 899999989999987 PP

  == domain 6  score: 6.4 bits;  conditional E-value: 0.01
                 HHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   1 dAlyklalsyrklgdtdkAleale 24 
                 +A ++ a++y++lgd  +A   ++
  EPX73077.1 809 EAWFYSAELYQQLGDEKQAAFCYD 832
                 799*********99****987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (859 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       815  (0.0454571); expected 358.6 (0.02)
Passed bias filter:                      514  (0.0286686); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.71u 0.27s 00:00:00.98 Elapsed: 00:00:00.46
# Mc/sec: 5605.06
//
Query:       EPX73078.1  [L=496]
Description: V-type ATPase V1 subunit B [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.6e-64  217.5   0.0    2.2e-64  217.0   0.0    1.2  1  ATP-synt_ab    ATP synthase alpha/beta family, nucleotide-bin
      4e-11   43.3   0.2    1.1e-10   41.9   0.2    1.7  1  ATP-synt_ab_N  ATP synthase alpha/beta family, beta-barrel do
  ------ inclusion threshold ------
      0.031   13.2   0.0      0.069   12.1   0.0    1.5  2  DUF3533        Protein of unknown function (DUF3533)


Domain annotation for each model (and alignments):
>> ATP-synt_ab  ATP synthase alpha/beta family, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  217.0   0.0   3.7e-68   2.2e-64       1     213 []     150     377 ..     150     377 .. 0.98

  Alignments for each domain:
  == domain 1  score: 217.0 bits;  conditional E-value: 3.7e-68
                  SSHHHHHHS-EBTT-EEEEEESTTSSHHHHHHHHHHHSSTS.............S.EEEEEEESEEHHHHHHHHHHCHHSSGGGGEEEEEEETTS-HH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.............x.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab   1 GirvlDalfpivqGqrtlipgafgvGktvisqslskqsnsd.............d.aiiyvgiGergnevaevleefpegtimkrtvlvantsnepva 84 
                  Gi+ +D + +i++Gq++ i++ +g+++++i++++++q++               +  i+++++G + ++++ + ++f+e++ ++r++l++n +n+p++
   EPX73078.1 150 GISSIDGMNSIARGQKIPIFSSAGLPHNEIAAQICRQADLVkkptkdvhdgheeNfSIVFAAMGVNLETARFFQRDFEENGSLERVTLFLNLANDPTI 247
                  899**********************************8655899********98789***************************************** PP

                  HHHHHHHHHHHHHHHHHH.TTSEEEEEEETHHHHHHHHHHHHHHTTTSBEGGGSBTTHHHHHHHHHTTSEEETSSEEEEEEEEEEE-GGCSTTSHHHH CS
                  xxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab  85 areasiytgitlAEyfrd.qgknvlliadslsrwaeAlreislrlgempadqgypaylgaklaslyERagkapdrtGsvtivaavspaggDfsdpvtt 181
                  +r++++++++t++E++++ ++k+vl i+++++ +a+Alre+s++ +e+p+++gyp+y++++l+++yERag+++ r+Gs+t++++++++++D+++p+++
   EPX73078.1 248 ERIITPRLALTASEFLAYqTEKHVLTILTDMTSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVEGRNGSITQIPILTMPNDDITHPIPD 345
                  *****************9789***************************************************************************** PP

                  HHHHHSSEEEEB-HHHHHTTBSSSBCTTTEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab 182 atlgitdgfivLdkklaqrkhfPainvlvSvS 213
                   t +it+g+i++d++l++++++P+invl S+S
   EPX73078.1 346 LTGYITEGQIFVDRQLQNNGIYPPINVLPSLS 377
                  ******************************98 PP

>> ATP-synt_ab_N  ATP synthase alpha/beta family, beta-barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.9   0.2   1.8e-14   1.1e-10       1      63 [.      27      87 ..      27      92 .. 0.89

  Alignments for each domain:
  == domain 1  score: 41.9 bits;  conditional E-value: 1.8e-14
                   EEEEETTEEEEESSTSCETCTTEEEEECCETCSTEEEEEEEEEETTEEEEEESS-STTBBT.TS CS
  ATP-synt_ab_N  1 ivqviGpvvdvefgigrlpgiynalevelvefgtlllgvalnlgedkVrvivmgstdGlsr.Gt 63
                   +++++Gp+v+ ++ +   p+++++++ +l + g+++ g++l++ + k++v+v+++t+G+++  t
     EPX73078.1 27 VSAITGPLVILDNIR--SPKYNEIVNLNLAD-GSVRSGQVLEVAGSKAIVQVFEGTSGVDVrKT 87
                   789********5555..5**********999.***************************98555 PP

>> DUF3533  Protein of unknown function (DUF3533)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0      0.46   2.7e+03     123     171 ..     235     282 ..     224     290 .. 0.72
   2 ?   12.1   0.0   1.1e-05     0.069      82     168 ..     357     445 ..     330     462 .. 0.82

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 0.46
     DUF3533 123 leliyesgRdattvssyilpaltqleaaalakygsqllqqliqslsnta 171
                 ++l+ + + d  t++ +i+p l  +++++la+++++ + ++++++++ a
  EPX73078.1 235 VTLFLNLAND-PTIERIITPRLALTASEFLAYQTEKHVLTILTDMTSYA 282
                 5666666676.57889999999999999999666666666766666555 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 1.1e-05
     DUF3533  82 veelvhkekywgaivvkenateklyaal..sangassynstelleliyesgRdattvssyilpaltqleaaalakygsqllqqliqsls 168
                 v +++ ++ ++  i+v +  ++ + +a+    +++   +++++l  +y+ gRda +++s++ + + ++e+ ++ ++  +  +++iq+  
  EPX73078.1 357 VDRQLQNNGIYPPINVLPSLSRLMKSAIgeGMTRNDHGDVSNQLYAMYAVGRDAASMKSVVGEEALSQEDRLALEFLGKFEKTFIQQGA 445
                 6788999999******************8556778899***********************9999888887776666666666665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (496 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       328  (0.0182944); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 3419.73
//
Query:       EPX73079.1  [L=344]
Description: alpha-1,2-galactosyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      3e-71  239.9   0.7    3.6e-71  239.7   0.7    1.1  1  Glyco_transf_34  galactosyl transferase GMA12/MNN10 family


Domain annotation for each model (and alignments):
>> Glyco_transf_34  galactosyl transferase GMA12/MNN10 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  239.7   0.7     2e-75   3.6e-71       3     239 .]      69     320 ..      67     320 .. 0.96

  Alignments for each domain:
  == domain 1  score: 239.7 bits;  conditional E-value: 2e-75
  Glyco_transf_34   3 peivlllvsnekkce...nssgdhelllkvikNrvdYaekhgyeifykkvsalla..eemnsvWaklpairaamkkyPeaewiWwlDqdAlimn 91 
                      +++v+++++n +      +   +++l + + +N+ dYa++hgy++++k+    ++  +e++++W+k+++i +am+kyP+aew+WwlD ++ im+
       EPX73079.1  69 SKVVMIVAVNDGGGVmdvKRADEWDLEKISKRNKEDYAKRHGYDLIFKSEGMKRRyaHEWRESWEKADYISEAMEKYPNAEWFWWLDLTTYIME 162
                      7999999999998877889999*************************6655555599************************************* PP

  Glyco_transf_34  92 mdlsleehvlkperLeelllkntpv...vplrryketnlvedgedvlviisqdwnglnagsflirnsewsklllDlwadpllrekkkavtesde 182
                      +++s+e+h++  +rL +++++n++     ++r+yk+++  ++++d+ +i  qd+ng+++gsf+ir+sewsk+l+D+++dp+++ +k+  +++de
       EPX73079.1 163 PQYSIENHII--NRLPKIAVRNITDpmeFNPRSYKQIPFEDYSDDISLIMGQDCNGFSLGSFIIRRSEWSKRLIDFLWDPVVYGQKHTEWPHDE 254
                      **********..***********998898999************************************************************** PP

  Glyco_transf_34 183 qsaleyllekhpevlskvglveqkvinsydegeke.........lgykegdlvvhfagCkvankca 239
                      q++ley++e +++++s +++v+ +++n+y++g++e         +++k++d++v++agC++ ++c+
       EPX73079.1 255 QNVLEYFYEHNAWLRSGIAFVPLRTLNAYTKGACEadssnprffYSHKQRDFLVNLAGCNYGRNCK 320
                      ***************************************************************995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (344 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       526  (0.0293379); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2614.37
//
Query:       EPX73080.1  [L=569]
Description: translation initiation factor eIF3d Moe1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.1e-203  678.0   0.0   1.2e-203  677.9   0.0    1.0  1  eIF-3_zeta  Eukaryotic translation initiation factor 3 subuni
  ------ inclusion threshold ------
       0.15   11.6   0.0       0.77    9.2   0.0    1.9  1  NARG2_C     NMDA receptor-regulated gene protein 2 C-terminus


Domain annotation for each model (and alignments):
>> eIF-3_zeta  Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  677.9   0.0  1.3e-207  1.2e-203       1     520 []       5     550 ..       5     550 .. 0.91

  Alignments for each domain:
  == domain 1  score: 677.9 bits;  conditional E-value: 1.3e-207
                 XXXXXXXXXXXXXXXX.XXXXXXX.XXXXXXXXXXXXXXXXXXXXXX.....XXXX..........X.X.XXXX.XXXXXXXXXXXXXXXXXXXXXXX. CS
  eIF-3_zeta   1 felpelednedgWGPseelpeefk.dipyapfsksdklgkvaDwtse.akekrekr..........r.a.ekygagsasafayqheedessFslVdnkk 85 
                 f+lp+l+  +++WGP+e+  e+f+ d+pyapfsk+d+lgk+aDw+ e  k+ re+r          r + ++yg+g+as+fayqh+edessFs++d+ +
  EPX73080.1   5 FKLPDLPPVKSAWGPHET--EQFNdDVPYAPFSKGDRLGKIADWSVEqPKDGREQRgrqgafvnrfRdQyQTYGHGAASVFAYQHSEDESSFSVIDRGS 101
                 56788888899*****87..886659********************97777777778888888755322356****99********************8 PP

                 .XX.XXX.......XXX.XXXXXXXX.....XXXXXXXXXX............................XXXXXXXXXX-----TT-EEEEEEEHHHHH CS
  eIF-3_zeta  86 akkkkkeak.....rqr.rgrgeekke....rqqqqalnkkqgeeekeerskkkkkkk.kgrrkgwkdkkdkeqrnreasvevkpeWkvleeidfsrLs 173
                  ++ +++a+       + rgrg+++++    r+++      +g++e+  +++++  +  +grr+gwkd+ dk+qr r+asv v +eW++lee++fs+Ls
  EPX73080.1 102 VNRVRTSARnggtlL-KvRGRGQNTQRggagRGGRFGGGAGRGGSETVMSRASGGGGGaRGRRFGWKDY-DKHQRIRNASVAVGNEWELLEEVEFSHLS 198
                 888555543355541.055666666656665555555555555555544444444333489999****9.***************************** PP

                 T--TT----EEEEEEEEE-BB-GGGGG-BTTB-EE------B-----GGG-HHHHHHTT.TS-SEEEEHHHHHHHHTGGG--S-EEEEEEEETTEEEEE CS
  eIF-3_zeta 174 klslevkepedlesyGkleyYdksydrittknekpLqkldrvfynvttsdDpviqelakekkatvfaTDailslLmcatrSvysWdivvtkkgnklfld 272
                 kl+l    pe++++yG ++ Ydk++d++++k+ekpLq ldrv+yn+tt++Dpviq+la +++a++f+TD+ilslLmc+trSvy+Wdiv+t++ +klf+d
  EPX73080.1 199 KLNLAAAAPETVDTYGYVYPYDKTFDKVHVKSEKPLQALDRVHYNTTTTEDPVIQKLAVSSEANIFITDSILSLLMCSTRSVYPWDIVITRQSGKLFFD 297
                 *************************************************************************************************** PP

                 --TTSCTTS--SSTTSSS--..-S-TTSTTSHHHHHHHHHHHHHHHHHHTBET.TS--EE-SB--TTS-GGGCC.CB-SEEEEEEEEE-STT.....-E CS
  eIF-3_zeta 273 krdgseidlltVnEtaadppl.edeedsiNspssLslEAtlinqnfsqqvlkeseeekvkfeepnpFvseeeeteelasvaYrYrkfdLsde..eekie 368
                 kr+g+++d+ltVnE+a+d p+ +d+++ +Nsp +Ls+EAt+inqnfs q+++e +eek+++++pnpF++++ee+++la ++Y Yrk++Ls +  e++++
  EPX73080.1 298 KREGGPFDYLTVNENAYDSPMdNDDREGVNSPGALSVEATYINQNFSVQAVREADEEKHDLSHPNPFYNPKEENDPLAAHGYVYRKVNLSLDsdEKPVN 396
                 *********************999999***************************999*********************************97789**** PP

                 EEEEEEESEEEE-TTS..EEEEEEEEEEES-HHHHT-...--HHHHTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHT-SEEEEEEEEEEETTEEEEEEE CS
  eIF-3_zeta 369 lvvRtevdavlkgkekeqkqfvtikaLnEfdskaqga...adWrskLdsqrGAvlatElknNscklakWtvqalLagadqlKlGyvsRanpkdaskHvi 464
                 l+vR+evd+++k+ ++ + q+v+ikaLnE+d+k +++   +dWrskL+sqrGAv+atE+knNsckla+Wt++alLag+d++K+G+vsR+n +da++H i
  EPX73080.1 397 LMVRAEVDGYMKTPSN-DVQYVSIKALNEYDPKFTNVagsVDWRSKLESQRGAVFATEMKNNSCKLARWTTEALLAGVDTMKIGFVSRSNIRDAQHHGI 494
                 ************9999.588**************9997756********************************************************** PP

                 EEEEEE-HHHHHHHTT--HHHHHHHHHHHHHHHHTS-SEEEEEEE-TTSSEEEEEE CS
  eIF-3_zeta 465 LgvqsykpkdlaaqinlnldNaWgivrtivdlvmkqpdgkYvllKdpnkpvirlYs 520
                 Lgv  ykp+dla+q+n++l+N+Wgivrti+d+++k+pdgkY l+Kdpn+p++rlYs
  EPX73080.1 495 LGVVAYKPADLANQMNMSLSNGWGIVRTIADICLKMPDGKYALVKDPNRPILRLYS 550
                 *******************************************************6 PP

>> NARG2_C  NMDA receptor-regulated gene protein 2 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.0   8.6e-05      0.77      16     156 ..     386     550 ..     370     561 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 8.6e-05
     NARG2_C  16 wsLkaeesellllvrlsvdavetlkkk...................kklpvhllpKlEyq..peyGvEaltksEllelWlellLr....sntvllvvri 89 
                  sL+++e+ ++l+vr +vd++ +++ +                      +v    KlE q  + +  E+  +s  l  W+   L+      ++++v+r 
  EPX73080.1 386 LSLDSDEKPVNLMVRAEVDGYMKTPSNdvqyvsikalneydpkftnVAGSVDWRSKLESQrgAVFATEMKNNSCKLARWTTEALLagvdTMKIGFVSRS 484
                 356777889***************999899999999999988776555567777899999333467777777777788988887733222344455553 PP

     NARG2_C  90 ...daqtskllllekltlesleeelsrlYnikpanlLsiLheiLkklsslqeGeYLLrhkakdsfvtiyk 156
                    daq++ +l     + ++l++++     ++ +n   i+  i  +  ++++G+Y L ++++++++ +y+
  EPX73080.1 485 nirDAQHHGILGVVAYKPADLANQMN----MSLSNGWGIVRTIADICLKMPDGKYALVKDPNRPILRLYS 550
                 11335555666666777777777766....7777777777777777788999999999999988888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (569 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       316  (0.0176251); expected 358.6 (0.02)
Passed bias filter:                      242  (0.0134977); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.45
# Mc/sec: 3791.69
//
Query:       EPX73081.1  [L=320]
Description: iron-sulfur cluster assembly ATPase Nbp35 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   3.6e-100  334.5   0.0   4.2e-100  334.3   0.0    1.0  1  ParA         NUBPL iron-transfer P-loop NTPase
    1.4e-10   41.3   0.0    6.1e-10   39.3   0.0    2.1  2  CbiA         CobQ/CobB/MinD/ParA nucleotide binding domain
    4.5e-07   30.0   0.0    1.7e-05   24.8   0.0    2.3  1  AAA_31       AAA domain
    9.5e-07   28.3   0.1    4.5e-05   22.8   0.0    2.3  2  ArsA_ATPase  Anion-transporting ATPase
    0.00019   21.4   0.0     0.0017   18.3   0.0    2.0  2  AAA_26       AAA domain
    0.00026   20.4   0.0    0.00047   19.5   0.0    1.4  1  MipZ         ATPase MipZ
     0.0029   17.1   0.0       0.38   10.2   0.0    2.3  2  Fer4_NifH    4Fe-4S iron sulfur cluster binding proteins, Nif
     0.0035   17.3   0.2     0.0095   15.9   0.1    1.7  2  RsgA_GTPase  RsgA GTPase
     0.0053   16.3   0.0      0.033   13.7   0.0    1.9  1  CBP_BcsQ     Cellulose biosynthesis protein BcsQ
     0.0061   16.6   0.0       0.22   11.5   0.0    2.2  2  SIS_2        SIS domain
     0.0093   15.6   0.0      0.021   14.4   0.0    1.5  2  AAA_25       AAA domain
  ------ inclusion threshold ------
      0.038   13.2   0.0       0.06   12.5   0.0    1.2  1  NB-ARC       NB-ARC domain
      0.059   13.0   0.0        1.2    8.7   0.0    2.2  2  SRP54        SRP54-type protein, GTPase domain
      0.072   13.1   0.0       0.12   12.4   0.0    1.2  1  TsaE         Threonylcarbamoyl adenosine biosynthesis protein
       0.15   12.2   0.1        0.6   10.3   0.1    1.9  1  AAA_33       AAA domain
       0.15   11.7   0.0       0.23   11.1   0.0    1.4  1  AAA_24       AAA domain
       0.18   12.4   0.0        1.5    9.4   0.0    2.1  2  AAA_18       AAA domain
        0.2   11.8   0.1         29    4.8   0.0    2.3  2  MMR_HSR1     50S ribosome-binding GTPase


Domain annotation for each model (and alignments):
>> ParA  NUBPL iron-transfer P-loop NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  334.3   0.0  4.2e-103  4.2e-100       1     245 [.      58     309 ..      58     310 .. 0.97

  Alignments for each domain:
  == domain 1  score: 334.3 bits;  conditional E-value: 4.2e-103
        ParA   1 kvkkviavlSgKGGVGKStvavnlAlaLa.kkglkvgllDaDiyGpsiprllgveeekpeqsekkliPvea.kgikvmSigfllesedeavvwrGpmks 97 
                 k+k++++vlSgKGGVGKSt++++lA+aL+ ++++++gl+D+Di+Gpsipr++gve+e+++qs++++ P+++  ++ vmSigfll+s+d++v+wrGp+k+
  EPX73081.1  58 KIKNKVLVLSGKGGVGKSTFSSQLAWALSlEEDKQIGLMDVDICGPSIPRIMGVEKEEAHQSSEGWSPIYVcPNLAVMSIGFLLPSDDSSVIWRGPKKN 156
                 599*************************98999******************************9******999************************** PP

        ParA  98 kaikqllkdvewgelDyLiiDlPPGtgDeqltvaqkl...plagaviVttpqevaladvkkaiemfkkvkvkvlGvveNmsgfvcpkcgekteif..gk 191
                 ++ikq++kdv+w++lD+Li+D+PPGt+De+l+++q +    ++ga++Vttpqeval+dv+k+i++++k++++vlGvveNmsgfvcp+c++kt+if  ++
  EPX73081.1 157 GLIKQFIKDVNWENLDFLIVDTPPGTSDEHLSLVQFFknaGIDGAIVVTTPQEVALQDVRKEIDFCRKASIPVLGVVENMSGFVCPSCRNKTNIFtvNT 255
                 ***********************************996666789***************************************************7778 PP

        ParA 192 gggeklaeelgvpllgeipldpeireasdegkplvlkepeseaakaleeiaekv 245
                 ggge+la+e+++p+lg++pldp+i++++d gk++v + pes+a++++ +i++kv
  EPX73081.1 256 GGGEALAQEMNIPFLGRVPLDPAIARSCDFGKSFVDECPESPASEIIIDIINKV 309
                 **************************************************9987 PP

>> CbiA  CobQ/CobB/MinD/ParA nucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.3   0.0   6.1e-13   6.1e-10       1     127 [.      63     288 ..      63     289 .. 0.90
   2 ?   -3.0   0.0       7.1   7.1e+03      77      89 ..     302     314 ..     296     317 .. 0.72

  Alignments for each domain:
  == domain 1  score: 39.3 bits;  conditional E-value: 6.1e-13
                 EEEEESSTTSSHHHHHHHHHHHHHH.TT--EEEEEEEESSCCCCHHTTEB-HHHH............................................ CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxx............................................ RF
        CbiA   1 iaiastkGGvGKTtlaanLaralar.rglrVllvDaDpqannlaileglendiep............................................ 54 
                 +++ s+kGGvGK+t++  La al+  + +++ l D+D  +++   ++g+e++++                                             
  EPX73081.1  63 VLVLSGKGGVGKSTFSSQLAWALSLeEDKQIGLMDVDICGPSIPRIMGVEKEEAHqssegwspiyvcpnlavmsigfllpsddssviwrgpkknglikq 161
                 6899********************9789**************999*********9******************************************** PP

                 ....................................................CCHCCCHHHHHHCHCHHHH.....EEEEEEEEESS....-TTCHHHH CS
                 ....................................................xxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxx.xxxxxxxxxx RF
        CbiA  55 ....................................................dlkrllellealgkkkall...lkiagvvlnrvdge.neetllkeal 97 
                                                                     d+ + + ++++ +++  +l    ++ g+v    +++ n +t    + 
  EPX73081.1 162 fikdvnwenldflivdtppgtsdehlslvqffknagidgaivvttpqevalqDVRKEIDFCRKASIP--VLgvvENMSGFVCPSCRNKtNIFTVNTGGG 258
                 ****************************************************777777777777765..344567888888766665415677777778 PP

                 HHHHHHCTS-EEEEEE--CCHCCCCHHTS- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        CbiA  98 eelkqrygvpvlgviprdeavaeapargep 127
                 e l q++++p+lg +p d a+a++   g++
  EPX73081.1 259 EALAQEMNIPFLGRVPLDPAIARSCDFGKS 288
                 8888888**************999888775 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 7.1
                 EEEEEEEESS... CS
                 xxxxxxxxxxxxx RF
        CbiA  77 agvvlnrvdgene 89 
                 +  ++n+vd +++
  EPX73081.1 302 IIDIINKVDQNLQ 314
                 5558999998854 PP

>> AAA_31  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.0   1.7e-08   1.7e-05       5     159 ..      64     217 ..      60     229 .. 0.68

  Alignments for each domain:
  == domain 1  score: 24.8 bits;  conditional E-value: 1.7e-08
      AAA_31   5 aianqKGGvGKTTtsvnlaaala.klgkkvLlvDlDpQanat.tglgiekneiektlyevlieeknikeaiiktkvenldlipssidLaeaeielvele 101
                  +   KGGvGK+T s +la al+ +++k++ l+D+D  + +    +g+ek+e++++       ++  + +++     nl ++     L + + +++   
  EPX73081.1  64 LVLSGKGGVGKSTFSSQLAWALSlEEDKQIGLMDVDICGPSIpRIMGVEKEEAHQS-------SEGWSPIYV---CPNLAVMSIGFLLPSDDSSVIWRG 152
                 56778******************999**********98865414566666654332.......233344444...566777777777777777777776 PP

      AAA_31 102 kkeeil.kellekvk.deYDyiiiDcpP.....sLglltenaLvasdsviipvqaeayaleGleq 159
                  k++ l k+++++v+ ++ D+ i+D+pP     +L+l+     +  d  i+++ +++ al+ +++
  EPX73081.1 153 PKKNGLiKQFIKDVNwENLDFLIVDTPPgtsdeHLSLVQFFKNAGIDGAIVVTTPQEVALQDVRK 217
                 66665559999999845699999999994433334444444444557777777777777776665 PP

>> ArsA_ATPase  Anion-transporting ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.0   4.5e-08   4.5e-05       2      32 ..      62      92 ..      61     137 .. 0.87
   2 ?    3.1   0.0     0.045        44     114     143 ..     160     191 ..     156     200 .. 0.73

  Alignments for each domain:
  == domain 1  score: 22.8 bits;  conditional E-value: 4.5e-08
                 EEEEEEESTTSSHHHHHHHHHHHHHHTTS-E CS
  ArsA_ATPase  2 kvilvgGKGGVGKttvsaatavklsekgkkv 32
                 kv++++GKGGVGK+t s+ +a  ls ++ k 
   EPX73081.1 62 KVLVLSGKGGVGKSTFSSQLAWALSLEEDKQ 92
                 7999********************9665543 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.045
                  HHHHHHHHCSSSSEEEEESBSCC..HTCGGGG CS
  ArsA_ATPase 114 eellkyvkeeeydvvvlDtaPTG..htlrlls 143
                  ++++k v+ e+ d +++Dt+P    + l l++
   EPX73081.1 160 KQFIKDVNWENLDFLIVDTPPGTsdEHLSLVQ 191
                  678999999**********9942113444444 PP

>> AAA_26  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.41   4.1e+02       3      26 ..      63      86 ..      47      94 .. 0.80
   2 !   18.3   0.0   1.7e-06    0.0017      89     194 ..     160     279 ..     149     282 .. 0.76

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.41
      AAA_26  3 ifvtgtdtgvGKTvvslgLvralk 26
                ++v +   gvGK++ s  L+ al+
  EPX73081.1 63 VLVLSGKGGVGKSTFSSQLAWALS 86
                667777778999999988888775 PP

  == domain 2  score: 18.3 bits;  conditional E-value: 1.7e-06
      AAA_26  89 ekiv.kelekdadivvVEGagglgvpiteellnadiaknlgap.vilVargglgtinqllltiealrqknvrvlGvilNk.......vrnpe....... 171
                 ++++ + ++++ d+++V+   g+++     l+ ++++kn g++  i+V+++++ +++++   i+++r+  ++vlGv+ N        +   +       
  EPX73081.1 160 KQFIkDVNWENLDFLIVDTPPGTSDE---HLSLVQFFKNAGIDgAIVVTTPQEVALQDVRKEIDFCRKASIPVLGVVENMsgfvcpsC---Rnktnift 252
                 55664457888899999998888764...47889999***999456666667789**********************99866543322...23345555 PP

      AAA_26 172 ....nvetlekksgipvlGvvPylpdl 194
                       e+l +  +ip lG+vP +p +
  EPX73081.1 253 vntgGGEALAQEMNIPFLGRVPLDPAI 279
                 55667777777778********99876 PP

>> MipZ  ATPase MipZ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   4.7e-07   0.00047       4     111 ..      64     183 ..      61     197 .. 0.67

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 4.7e-07
                 EE--SSTTSSHHHHHHHHHHHHH.TTT--EEEEE--TTT-HHHHHHHHHHHHH..HHHT--.......----EEE-SSS-HHHHTTS-HHHHHHHHHHH CS
        MipZ   4 vlgnekGGsGksttavhvavaLl.kkGarvaaidldlrqrtlarylenraata..erkgls.......Lplpealalseaeeaeveeeeeaevaeleel 92 
                  +   kGG Gkst +  +a aL+ ++ ++++ +d+d+   ++ r ++  ++ a  +++g s       L++ ++  l  ++ ++v     ++   +++ 
  EPX73081.1  64 LVLSGKGGVGKSTFSSQLAWALSlEEDKQIGLMDVDICGPSIPRIMGVEKEEAhqSSEGWSpiyvcpnLAVMSIGFLLPSDDSSVIWRGPKKNGLIKQF 162
                 45567*****************6267899****************976555440044444322111114444444444555555555555555778888 PP

                 HHHHH.HH-SEEEEE--.SS- CS
        MipZ  93 vadle.aeldfividtP.Gsd 111
                 ++d++ ++ldf+++dtP G+ 
  EPX73081.1 163 IKDVNwENLDFLIVDTPpGTS 183
                 888873689*******83433 PP

>> Fer4_NifH  4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.0   0.00038      0.38       4      31 ..      65      93 ..      62     111 .. 0.79
   2 ?    4.6   0.0     0.019        19     193     247 ..     258     312 ..     223     317 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00038
   Fer4_NifH  4 aiyGkGGiGksttsqnlsaalaemg.kkv 31
                 + GkGG+Gkst s+ l+ al+    k++
  EPX73081.1 65 VLSGKGGVGKSTFSSQLAWALSLEEdKQI 93
                567***************99975542555 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.019
   Fer4_NifH 193 iekfaeelgtkvlevvPrdeivrkaelrkktvieyapeseqakeyrelarkilen 247
                  e++a+e++++ l  vP+d  + ++    k  ++  pes+ ++   ++ +k+ +n
  EPX73081.1 258 GEALAQEMNIPFLGRVPLDPAIARSCDFGKSFVDECPESPASEIIIDIINKVDQN 312
                 5799******************998877777777788888888888888888876 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.1   9.5e-06    0.0095      95     122 ..      57      84 ..      48      93 .. 0.85
   2 ?   -2.8   0.0       5.1   5.1e+03      14      49 ..     196     229 ..     188     238 .. 0.67

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 9.5e-06
                  HHCTTSEEEEECSTTSSHHHHHHHHCTT CS
  RsgA_GTPase  95 ellkdktsvlvGqSGvGKStLinallpe 122
                  +++k+k+ vl G+ GvGKSt+  +l+  
   EPX73081.1  57 SKIKNKVLVLSGKGGVGKSTFSSQLAWA 84 
                  57899****************9998755 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 5.1
                  ES--EEEEEEESTTTT--HHHHHHHHHHHHHTT-EE CS
  RsgA_GTPase  14 aNvdqllivvslkepelslnlldrfLvlaeekgiep 49 
                  a +d +++v++ +  e+ l+ + + + ++ ++ i++
   EPX73081.1 196 AGIDGAIVVTTPQ--EVALQDVRKEIDFCRKASIPV 229
                  5677777777666..566666666666666666555 PP

>> CBP_BcsQ  Cellulose biosynthesis protein BcsQ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.0   3.3e-05     0.033       2     134 ..      62     189 ..      61     211 .. 0.65

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 3.3e-05
    CBP_BcsQ   2 kvlalqGvRGGvGttsllaaLawalhelges...vlviDlspdnlLrlhFnvdieqregwaraeldgapwrqaaleyapgldllPfGelnveekenlqq 97 
                 kvl+l+G +GGvG+++ ++ Lawal   +++    + +D++   + r+   ++        +a+  ++ w+   + ++p+l+++  G l  ++ +++  
  EPX73081.1  62 KVLVLSG-KGGVGKSTFSSQLAWALSLEEDKqigLMDVDICGPSIPRIMGVEK-------EEAHQSSEGWS--PIYVCPNLAVMSIGFLLPSDDSSVIW 150
                 5788999.8***************98766552113457888777666543322.......23444444554..34567777777777765555554433 PP

    CBP_BcsQ  98 .laekaeallaalkelk.eqyrwillDlpagasaltrel 134
                    +k++ +++++k ++ e+ +++++D p g+s+ + +l
  EPX73081.1 151 rGPKKNGLIKQFIKDVNwENLDFLIVDTPPGTSDEHLSL 189
                 255566677777777777777777777777776666555 PP

>> SIS_2  SIS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0      0.11   1.1e+02      88     131 ..     155     198 ..     147     205 .. 0.88
   2 !   11.5   0.0   0.00022      0.22      24      73 ..     236     285 ..     231     319 .. 0.81

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.11
                 -TTHHHHHHHHTT--TT-EEEEE-SS--SHHHHHHHHHHHHHT- CS
       SIS_2  88 degyakqilrlvrlkpgDvLlviSnsGnnavvveaaeaakergm 131
                  +g+ kq+ ++v+ ++ D L+v    G +   + +++ +k+ g+
  EPX73081.1 155 KNGLIKQFIKDVNWENLDFLIVDTPPGTSDEHLSLVQFFKNAGI 198
                 68999**********************99988888888887775 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 0.00022
                 HHHHHHHHHHTT--EEEEESGGGHHHHHHTSSSTT-BTTEEEE--GGGSS CS
       SIS_2  24 aaeliadslenggkvlvfGsGhSaalaeelaaragglaeferialpalal 73 
                  +  +  s++n+  +++  +G+ +ala+e+   + g++++++ + ++  +
  EPX73081.1 236 MSGFVCPSCRNKTNIFTVNTGGGEALAQEMNIPFLGRVPLDPAIARSCDF 285
                 5666778999********************************99887655 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   2.1e-05     0.021      32      58 ..      60      86 ..      51     101 .. 0.89
   2 ?   -3.3   0.0       5.8   5.8e+03     128     150 ..     157     178 ..     149     178 .. 0.73

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 2.1e-05
      AAA_25 32 agelallaGapgtGKttlaldlalava 58
                ++++ +l G +g+GK+t+ ++la a++
  EPX73081.1 60 KNKVLVLSGKGGVGKSTFSSQLAWALS 86
                67899******************9877 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 5.8
      AAA_25 128 advdaleaaieevegvrlvviDp 150
                 + +++ +++++  e+++++++D+
  EPX73081.1 157 GLIKQFIKDVNW-ENLDFLIVDT 178
                 556677777777.8899999997 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   6.1e-05      0.06       8      40 ..      52      81 ..      47      91 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 6.1e-05
                HHHHHHCTTTSCSEEEEEEESTTSSHHHHHHHH CS
      NB-ARC  8 viekLlekdelqslvvalvGmgGvGKttlakqi 40
                v e+L+   +++  v+ l+G+gGvGK+t ++q 
  EPX73081.1 52 VTERLS---KIKNKVLVLSGKGGVGKSTFSSQL 81
                566777...344459**************9986 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.0    0.0012       1.2       2      39 ..      62     100 ..      61     104 .. 0.86
   2 ?    1.9   0.0      0.15   1.5e+02      72      92 ..     159     179 ..     151     211 .. 0.71

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0012
                 EEEEEEESTTSSHHHHHHHHHHHHHHT.TS-EEEEEEST CS
       SRP54   2 nvillvGlqGaGKTttlaKLaallkke.gkkvllvaaDt 39 
                 +v++l G  G+GK t  ++La  l+ e  k++ l+ +D+
  EPX73081.1  62 KVLVLSGKGGVGKSTFSSQLAWALSLEeDKQIGLMDVDI 100
                 6899*****************999877688888887775 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.15
                 HHHHHHHHHHTTSSEEEEEE- CS
       SRP54  72 akeavekakeekidvvlvDTa 92 
                 +k+ ++  + e+ d+++vDT 
  EPX73081.1 159 IKQFIKDVNWENLDFLIVDTP 179
                 566677777788888888883 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   0.00012      0.12      11      46 ..      53      88 ..      47      93 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00012
                HHHHHHCHTEEEEEEESTTSSHHHHHHHHHHHTT-- CS
        TsaE 11 gkklakalgdvilLeGdLGaGKTtlvrglakalgve 46
                 ++l k  ++v++L+G+ G+GK+t++ +la al +e
  EPX73081.1 53 TERLSKIKNKVLVLSGKGGVGKSTFSSQLAWALSLE 88
                56777766899******************9998765 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.1    0.0006       0.6       1      23 [.      63      85 ..      63     220 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.0006
      AAA_33  1 lvllvGlpGsGKstlaerllkkl 23
                +++l G  G+GKst++ +l+ +l
  EPX73081.1 63 VLVLSGKGGVGKSTFSSQLAWAL 85
                68899*************98544 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00023      0.23       2      33 ..      61      91 ..      60     178 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00023
      AAA_24  2 klkiliyGpsgiGKTtlakelgpkplfidtek 33
                ++ +++ G+ g+GK+t+ ++l   +l +  +k
  EPX73081.1 61 NKVLVLSGKGGVGKSTFSSQL-AWALSLEEDK 91
                67899***************9.6666555554 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.0    0.0015       1.5       2      22 ..      65      85 ..      64     121 .. 0.75
   2 ?    0.3   0.0      0.95   9.4e+02      84     111 ..     190     216 ..     183     225 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0015
      AAA_18  2 lltGtpGvGKttlakeLskrl 22
                +l+G+ GvGK+t++  L+  l
  EPX73081.1 65 VLSGKGGVGKSTFSSQLAWAL 85
                689**************7665 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.95
      AAA_18  84 aeleseaakdikkvvLtaspeelleRle 111
                 +++++ a +d+  +v+t++ e+ l+ ++
  EPX73081.1 190 VQFFKNAGIDGA-IVVTTPQEVALQDVR 216
                 567888888888.********9987555 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0     0.029        29       3      20 ..      65      82 ..      63      94 .. 0.81
   2 ?    4.7   0.0     0.031        31      40     108 ..     165     229 ..     155     235 .. 0.64

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.029
                EEEESTTSSHHHHHHHHH CS
    MMR_HSR1  3 aivGrpNvGKStLinalt 20
                ++ G+  vGKSt+ ++l 
  EPX73081.1 65 VLSGKGGVGKSTFSSQLA 82
                678999*******99886 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.031
                 EEEETTEEEEEEECGGCSSHHHHHH.HHHHHHHHHHCTSEEEEEEETTTT.CSHHHHHHHHHHHHHTTSEE CS
    MMR_HSR1  40 rvklkgkeielvDtpGliegaseek.glgkaflaleeadlillvvdasee.klkpldeeleelleeakkpl 108
                  v++++ ++ +vDtp    g s+e+ +l + f+ +   d +++v   + e  l+++++e+  + ++a +p+
  EPX73081.1 165 DVNWENLDFLIVDTPP---GTSDEHlSLVQFFK-NAGIDGAIVVTTPQ-EvALQDVRKEIDFC-RKASIPV 229
                 46677899******86...23344436666666.56679999888744.33566676666555.4455555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       664  (0.037035); expected 358.6 (0.02)
Passed bias filter:                      588  (0.032796); expected 358.6 (0.02)
Passed Vit filter:                        93  (0.00518713); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 2153.28
//
Query:       EPX73082.1  [L=625]
Description: ribonuclease H70 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.5e-09   36.8   0.0    1.1e-08   35.9   0.0    1.5  1  RNase_T         Exonuclease
  ------ inclusion threshold ------
       0.18   10.1   7.6       0.18   10.1   4.3    2.0  2  CDC45           CDC45-like protein
        0.2   11.2  23.9      0.055   13.1  19.0    2.2  2  SR-25           Nuclear RNA-splicing-associated protein
       0.56   10.0   3.6        1.3    8.8   3.6    1.6  1  Band_3_cyto     Band 3 cytoplasmic domain


Domain annotation for each model (and alignments):
>> RNase_T  Exonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.9   0.0   2.4e-12   1.1e-08       2     165 .]     272     420 ..     271     420 .. 0.85

  Alignments for each domain:
  == domain 1  score: 35.9 bits;  conditional E-value: 2.4e-12
                 EEEEEESSSTTCTTS-EEEEEEEEEETTCCEEEEEEEEEEEHSSHCSSSHHHHHHHHHCHHHHHTCEBHHHHHHHHHHHHHHHTCCCETTTCEEEESSH CS
     RNase_T   2 viDlEttgldakekdeiieiaaisidggeneigetfhfyvkptelakltdecteftgitqemldeapsfkevleefkellrklallvahnaafdvgflr 100
                 ++D+E++ ++++      eia+++i+  +n  +  ++ +vkp+ +  +t+++t+f+git e+l +  +    ++ ++ +l+++     +n+ +++g++ 
  EPX73082.1 272 AMDCEMVKTENG-----SEIARVTIVDMKN--EVLYDELVKPDFP--VTNYVTQFSGITEEKLAPVTTR--LADVHAYFLDTI-----DNNVVLLGHSL 354
                 79*******995.....7999999999987..4447*********..***************9998444..588888888844.....5679******* PP

                 HHHHHHHHHHHHHHHHCSEHCECHHHHHHHHHCHHHHHHHHHTTCHSSSS....TSSHHHHHHHHHHHH CS
     RNase_T 101 aadkrilkkevpkrnqfldtlildkatlkelartsldklaeklgleedgr....aHrAldDaeataklf 165
                 + d  +l   +   ++++dt+++   t     +  l+ la k + +e+++     H++ +Da ++++l+
  EPX73082.1 355 NSDLNCLRFVH---PHIIDTANIYNHTRGPPSKPALKWLASKWLHKEIQKggalGHDSAEDAATCVELL 420
                 ******99954...5999**99977776555559999999999999999999899**********9986 PP

>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   4.3     4e-05      0.18     122     191 ..      14      83 ..       2     232 .. 0.54
   2 ?    1.2   0.1      0.02        88     252     324 ..     485     555 ..     459     559 .. 0.59

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 4e-05
       CDC45 122 ayealeeeeesdeede.eeeeeddddeeeeeeeeedeedeeedeeeskkkrksksdeeeesddddersrkr 191
                 +  +le+++ ++++++ +  + +  +++++++++ +e+ +e+d++e+kkk+k+k +++++  +d++ +r +
  EPX73082.1  14 KDAKLEKHQIEKKRKKlK-RKAETGSSSSDSSKSGKESPDEKDDSEKKKKKKKKLKKSKQPLNDENYPRLQ 83 
                 222233332222222221.1111111112211111222222222222222222222222222222222222 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.02
       CDC45 252 AIvGltslelserisaeryerlrallrdeVrrlnpss.ktekietkarspddtsirlseelrllLlRhWsLydS 324
                 A+v l+++         r  ++ ++ + +V+r n+++ + ++++t+a ++d+ +i +s+ l  l  R   LydS
  EPX73082.1 485 AVVTLSDMHNFVWA---RLREVEQVAEWNVNRANQKQsNGTDSDTSAGEQDNDKIDYSQALAHLNRRIRLLYDS 555
                 44444444333333...555666666667777777652333344444566777777777766666666666666 PP

>> SR-25  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1  19.0   1.2e-05     0.055      41     102 ..      10      72 ..       2      95 .. 0.56
   2 ?   -0.6   0.2      0.18   8.2e+02      55      70 ..     203     217 ..     190     230 .. 0.51

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.2e-05
       SR-25  41 assasekee.erskekkkkkrrrssssssssssssssssssssssssddrkkrgkkkdkkkkk 102
                 + + ++++  +++ ekk+kk +r++ + ssss ss+s   s  ++ ++++kk++kkk kk+k+
  EPX73082.1  10 KEELKDAKLeKHQIEKKRKKLKRKAETGSSSSDSSKSGKESPDEKDDSEKKKKKKKKLKKSKQ 72 
                 333333333144556666666666666666665555555555444455555555555555554 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.18
       SR-25  55 kkkkkrrrssssssss 70 
                 +kk++ r +  + s+s
  EPX73082.1 203 QKKRRDR-EMKAMSKS 217
                 1111111.11122222 PP

>> Band_3_cyto  Band 3 cytoplasmic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   3.6   0.00029       1.3      64     147 ..       9      90 ..       3     137 .. 0.58

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00029
                  HHHHHHHHHTS-EE-CCHHHHHT-EEE-EE-TTS----------EE--SSS-SS-HHHHHHTTTTTSS--..........--SS CS
  Band_3_cyto  64 dreevlraLLlkhrHqneekekgvllptvrslssigsllsekkkaskellskqssleteeakaseslskssseeslsssleeek 147
                  ++ee+++a L kh+ ++++k+ +    t  s s+  s++s k++ ++++ s++++++++++k+s++  + ++ + l+s++++ +
   EPX73082.1   9 KKEELKDAKLEKHQIEKKRKKLKRKAETGSSSSD--SSKSGKESPDEKDDSEKKKKKKKKLKKSKQPLNDENYPRLQSTENNLQ 90 
                  7899999999999888885555555555444444..445545555555555555555555555555444444444333333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (625 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2022  (0.112778); expected 358.6 (0.02)
Passed bias filter:                      791  (0.0441185); expected 358.6 (0.02)
Passed Vit filter:                       163  (0.00909142); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.82u 0.28s 00:00:01.10 Elapsed: 00:00:00.43
# Mc/sec: 4375.37
//
Query:       EPX73083.1  [L=249]
Description: 19S proteasome regulatory subunit Rpn10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.1e-23   82.1   0.0    3.9e-22   78.9   0.0    2.1  2  VWA_2            von Willebrand factor type A domain
    1.1e-09   38.7   0.0    1.5e-09   38.4   0.0    1.1  1  VWA              von Willebrand factor type A domain
    1.9e-08   34.4   0.0    3.2e-08   33.6   0.0    1.4  1  Ssl1             Ssl1-like
  ------ inclusion threshold ------
      0.035   14.0   1.1      0.092   12.7   1.1    1.8  1  UIM              Ubiquitin interaction motif
      0.055   13.2   0.0       0.16   11.8   0.0    1.8  1  XPC-binding      XPC-binding domain
       0.12   11.6   0.1       0.18   11.0   0.1    1.2  1  Glyco_transf_52  Glycosyltransferase family 52


Domain annotation for each model (and alignments):
>> VWA_2  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.9   0.0   1.3e-25   3.9e-22       2     104 ..       7     114 ..       6     117 .. 0.91
   2 ?    0.9   0.0      0.23   6.9e+02      27      56 ..     152     182 ..     148     231 .. 0.72

  Alignments for each domain:
  == domain 1  score: 78.9 bits;  conditional E-value: 1.3e-25
       VWA_2   2 vfvlDtSgSmrngdygptrleaakdaveallksl....pgdrvglvtfsd.gpevlipltkdkakilnalrnleakgggtnlaaaLqlarkalkkrr.k 94 
                 ++++D+S++m ngdy p+r++a+kd v  ++++     p++ +gl+t++d +p+vl++lt+d++k+l+a+++l  + g++ +++a+q a+ alk+r  k
  EPX73083.1   7 MLLIDNSEWMINGDYIPNRFDAQKDTVHLIFNQKindnPETMCGLMTMGDnNPQVLSTLTRDYGKFLSAMHDLPVR-GDSKFGDAIQIAQLALKHREnK 104
                 89******************************555665899*********88**********************95.*******************996 PP

       VWA_2  95 gekrvivlit 104
                 +++ +iv + 
  EPX73083.1 105 TQRPRIVAFV 114
                 7777776664 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.23
       VWA_2  27 aveallkslp.gdrvglvtfsdgpevliplt 56 
                 a+++++++ + +d++ lvt+  ++++l++l 
  EPX73083.1 152 ALQRFIEAANsNDNCHLVTVPPSSQLLSDLV 182
                 7889999665599999999988888888774 PP

>> VWA  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.4   0.0   4.9e-13   1.5e-09       3     174 ..       7     183 ..       7     184 .. 0.84

  Alignments for each domain:
  == domain 1  score: 38.4 bits;  conditional E-value: 4.9e-13
                 EEEEE-STTS.....CHHHHHHHHHHHHHHHHHHTBTTTTEEEEEEEESSS.EEEEEETTSHCHHHHHHHHHHTGSGGGGSSC-HHHHHHHHHHHHHHH CS
         VWA   3 vfvlDgSgsm.....geenfekvkefikklveklevgpegtrvglvqfsse.vktefslndysskeellsalnnlkysgggttntgkalkyaleklfks 95 
                 ++++D+S+ m      +++f+  k+ +  ++++ + +++ t  gl++++++ +++   l+++    ++lsa ++l+++g ++   g+a++ a   l ++
  EPX73083.1   7 MLLIDNSEWMingdyIPNRFDAQKDTVHLIFNQKINDNPETMCGLMTMGDNnPQVLSTLTRDY--GKFLSAMHDLPVRGDSKF--GDAIQIAQLALKHR 101
                 589*******99888889999****************************998999999*9966..8********977777666..*****887755555 PP

                 HGTSSTTSEEEEEEEESS--CS.SHTHHHHHHHHGCTEEEEEEEESSSHHHHHHHHH...SSSSCHHCEEEESSHHH.HHHHHH CS
         VWA  96 sagaRenakkviilltdGksnd.gdpkeaaneakeqgikvfavGvgnadekelLnki...asepgeghvftvtdfee.leelfe 174
                 +++  ++ ++++ ++ +   +d +++ + a+++k+++i + ++ +g+   +  L+++   a++++++h  tv+ +++ l +l++
  EPX73083.1 102 ENK--TQRPRIVAFVGSPIVEDeKNLIRLAKRMKKNNIAIDIIHIGELESEGALQRFieaANSNDNCHLVTVPPSSQlLSDLVN 183
                 555..5556666666666667745*********************************887666779***999988863556665 PP

>> Ssl1  Ssl1-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.6   0.0   1.1e-11   3.2e-08       2     138 ..      10     144 ..       9     162 .. 0.91

  Alignments for each domain:
  == domain 1  score: 33.6 bits;  conditional E-value: 1.1e-11
                 EE-SGGGGSSSSSS-HHHHHHHHHHHHHHHHHHHSTT-EEEEEEEETTEEEEEEEEES-HHHHHHHHHHHTTS---S---HHHHHHHHHHHHSSS-TTS CS
        Ssl1   2 lDlsrameekdlkpsrlavviklleefveeffdqnPisqlgliavkdkkaekltelsGnprkhikaLkslreveakgepsLqnaLelalasLkkvpsha 100
                 +D s+ m + d  p+r++ +  +++   ++  + nP +  gl+++ d+  + l++l+ +  k+++a   + +  ++g++   +a+++a+  Lk+    +
  EPX73083.1  10 IDNSEWMINGDYIPNRFDAQKDTVHLIFNQKINDNPETMCGLMTMGDNNPQVLSTLTRDYGKFLSA---MHDLPVRGDSKFGDAIQIAQLALKHRENKT 105
                 8******************************************************98666655555...55566************************* PP

                 EE.EEEEEE-SS----SS-HHHHHHHHHHTT-EEEEEEE CS
        Ssl1 101 sr.evliifsslstcDPgdiyetidelkkekirvsvigL 138
                 +r  ++  ++s    D  ++ ++ +++kk++i + +i +
  EPX73083.1 106 QRpRIVAFVGSPIVEDEKNLIRLAKRMKKNNIAIDIIHI 144
                 *945777889************************99965 PP

>> UIM  Ubiquitin interaction motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   1.1   3.1e-05     0.092       3      16 ..     207     220 ..     207     220 .. 0.94

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 3.1e-05
         UIM   3 dedLqrAlalSlqE 16 
                 d +L++Al+lS++E
  EPX73083.1 207 DPELALALELSMAE 220
                 789*********99 PP

>> XPC-binding  XPC-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   5.2e-05      0.16      15      54 ..      39      77 ..      37      79 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 5.2e-05
  XPC-binding 15 qlvqqnPqlLqplLqqlaqsnPqllqlIqqnqeeFlqlLn 54
                 q ++ nP+ +  l+  ++  nPq+l  ++++  +Fl+ ++
   EPX73083.1 39 QKINDNPETMCGLM-TMGDNNPQVLSTLTRDYGKFLSAMH 77
                 56889999999987.58*******************9986 PP

>> Glyco_transf_52  Glycosyltransferase family 52
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   6.2e-05      0.18     164     200 ..      99     135 ..      89     143 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 6.2e-05
  Glyco_transf_52 164 qkiedessapeisiLlgqPlledeeenieliekiikk 200
                      ++ e ++++p i+ ++g+P++ede++ i l++++ k+
       EPX73083.1  99 KHRENKTQRPRIVAFVGSPIVEDEKNLIRLAKRMKKN 135
                      4557788899****************9*999998764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       621  (0.0346366); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.62u 0.33s 00:00:00.95 Elapsed: 00:00:00.55
# Mc/sec: 1364.18
//
Query:       EPX73084.1  [L=653]
Description: mitochondrial ATP-dependent RNA helicase Rpm2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-11   44.5   0.0      4e-11   43.3   0.0    1.7  1  Helicase_C  Helicase conserved C-terminal domain
    1.4e-10   40.9   0.4    6.7e-09   35.5   0.0    2.6  2  SUV3_C      Mitochondrial degradasome RNA helicase subunit C 


Domain annotation for each model (and alignments):
>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.3   0.0   4.4e-15     4e-11      11     110 ..     336     445 ..     324     446 .. 0.85

  Alignments for each domain:
  == domain 1  score: 43.3 bits;  conditional E-value: 4.4e-15
                 HHTTTTSEEEEEESSHH..HHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH..TTSSSEEEESGGGTSSSTSTTESEEEESSSS.SSH....... CS
  Helicase_C  11 kleeeggkilifvntid..rlekvklllekkgikvavlhgelpqnereeileqfn..kgesdvLiatdvaerGidipkvnlVinfdlp.rnv....... 97 
                 kl+ ++g++l+   ++d   l   k ++ek g ++av++g+lp + r++  + fn  ++e ++L+a+d++++G++++ v+ +i+  l+ +         
  EPX73084.1 336 KLKLREGDCLVAFSRKDifAL--KKKVEEKMGKRTAVIYGSLPPEVRNQQASLFNsdSHEEKILLASDAIGMGLNLT-VKRIIFHTLKkF-Sgkeiidi 430
                 778899999999999996555..59999999************************8778889**************5.999999999962.33445777 PP

                 ..HHHHHHHTTSSST CS
  Helicase_C  98 ..tsyiqriGRtgRa 110
                   ++++q +GR+gR 
  EPX73084.1 431 paSQVKQIAGRAGRH 445
                 78************6 PP

>> SUV3_C  Mitochondrial degradasome RNA helicase subunit C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.1     0.012   1.1e+02      27      43 ..     349     365 ..     346     367 .. 0.87
   2 !   35.5   0.0   7.5e-13   6.7e-09       1      47 [.     603     648 ..     603     649 .. 0.94

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.012
                 -HHHHHHHHHHHHHHHH CS
      SUV3_C  27 drelaeelkkeveekIe 43 
                 +r+  ++lkk+veek+ 
  EPX73084.1 349 SRKDIFALKKKVEEKMG 365
                 68999**********96 PP

  == domain 2  score: 35.5 bits;  conditional E-value: 7.5e-13
                 -HHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHH CS
      SUV3_C   1 LerLEslhkvldLYlWLSyRfpevFpdrelaeelkkeveekIeeaLe 47 
                 L +LE +hk++++YlW S R+p++ +  e a  lkk++e ++ ++L 
  EPX73084.1 603 LVDLEKFHKMIVVYLWVSLRYPNI-ILPEAALVLKKLTEGLLAKGLV 648
                 789*********************.9*************99999885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (653 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       570  (0.0317921); expected 358.6 (0.02)
Passed bias filter:                      528  (0.0294495); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.75u 0.36s 00:00:01.10 Elapsed: 00:00:00.54
# Mc/sec: 3630.45
//
Query:       EPX73085.1  [L=464]
Description: KAT5 family histone acetyltransferase Mst1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.1e-82  274.6   1.4    4.7e-82  274.0   1.4    1.3  1  MOZ_SAS         MOZ/SAS family
    7.2e-24   83.2   3.8    2.2e-23   81.6   3.8    1.9  1  zf-MYST         MYST family zinc finger domain
    4.9e-20   71.2   1.4    1.2e-19   69.9   1.4    1.7  1  Tudor-knot      RNA binding activity-knot of a chromodomain
      0.003   18.0   0.0     0.0061   17.0   0.0    1.5  1  Acetyltransf_7  Acetyltransferase (GNAT) domain
  ------ inclusion threshold ------
      0.037   14.3   0.0      0.091   13.0   0.0    1.7  1  Acetyltransf_1  Acetyltransferase (GNAT) family
       0.07   13.0   0.1       0.16   11.9   0.1    1.6  1  Chromo          Chromo (CHRromatin Organisation MOdifier) dom
      0.075   13.5   0.1       0.21   12.1   0.1    1.8  1  Agenet          Agenet domain
       0.19   11.5   0.4       0.41   10.5   0.0    1.7  2  IF2_N           Translation initiation factor IF-2, N-termina


Domain annotation for each model (and alignments):
>> MOZ_SAS  MOZ/SAS family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  274.0   1.4   2.1e-85   4.7e-82       1     179 []     241     418 ..     241     418 .. 0.98

  Alignments for each domain:
  == domain 1  score: 274.0 bits;  conditional E-value: 2.1e-85
     MOZ_SAS   1 ppGkeiYrkeklsvfevdGekeklycqnLcllaklFldhktlyydvepFlfYvlteadeegahivGyFskekesaeeynlaCilvlPpyqrkgyGklli 99 
                 ppG+eiYr++ +s+fe+dG+k+k++c+n+cll+klFldhk lyydv+pFlfY ++++de g+h+vGyFskekesae+ynlaCil+lP+yq++gyGklli
  EPX73085.1 241 PPGNEIYRDDYISFFEIDGRKQKTWCRNVCLLSKLFLDHKMLYYDVDPFLFYAMCRRDEYGCHLVGYFSKEKESAENYNLACILTLPQYQQHGYGKLLI 339
                 8************************************************************************************************** PP

     MOZ_SAS 100 efsYeLskrekkigtPekPlsdlgllsyrsywkeeilellkekekkkisieeisektgikeeDiistleelkllkyakgk 179
                 +fsYeLsk+e+k g+PekPlsdlgl+syr+yw+e+i++l+ +++ ++++i+e+++kt+++++D+++tl++l++lky+kg+
  EPX73085.1 340 QFSYELSKKEHKHGSPEKPLSDLGLISYRAYWAEQIITLVCSMR-NETTIDELANKTAMTTNDVLHTLQALDMLKYYKGQ 418
                 **************************************999855.899*****************************986 PP

>> zf-MYST  MYST family zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.6   3.8   9.7e-27   2.2e-23       1      55 []     182     236 ..     182     236 .. 0.99

  Alignments for each domain:
  == domain 1  score: 81.6 bits;  conditional E-value: 9.7e-27
     zf-MYST   1 vkniekieiGeyeiktWYfSpYPeelankekLyvCefClkYmksakelerHkkkC 55 
                 ++ni+ki++G++ei++WYfSpYP+e+++++ +y+C fC+ Y+ s+++++rH++kC
  EPX73085.1 182 IRNINKIQLGDHEIEPWYFSPYPKEFSEVDVVYICSFCFCYYGSERQFKRHREKC 236
                 79***************************************************** PP

>> Tudor-knot  RNA binding activity-knot of a chromodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.9   1.4   5.6e-23   1.2e-19       2      55 .]      22      74 ..      21      74 .. 0.96

  Alignments for each domain:
  == domain 1  score: 69.9 bits;  conditional E-value: 5.6e-23
                -TTTEEEEEETTSCEEEEEEEEEEETSSCEEEEEEETTS-CCC-EEEETTTEES CS
  Tudor-knot  2 evgckvlvrkkdgelrkAeilsirekkgkyeYYVHYeefNkRlDeWVsaeridl 55
                + ++kv+++k dge+rkAeil i++k++ + YYVHY ++NkRlDeW++ e+idl
  EPX73085.1 22 VYKSKVYAFK-DGEYRKAEILMIQKKASGTFYYVHYDDYNKRLDEWITIENIDL 74
                6789******.*****************************************86 PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   2.7e-06    0.0061      24      49 ..     312     347 ..     287     374 .. 0.70

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 2.7e-06
                     S.....TCTEEEEE-GGGTTSSHHHHHHHH.....T CS
  Acetyltransf_7  24 d.....aeitrlaVdpeyrgkGiGraLlea.....a 49 
                     +     +++ ++ ++p+y+ +G+G+ L+++     +
      EPX73085.1 312 KesaenYNLACILTLPQYQQHGYGKLLIQFsyelsK 347
                     1344434444599****************8444331 PP

>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   4.1e-05     0.091      44      92 ..     304     349 ..     254     355 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 4.1e-05
                     EEEEEEEEEEETTSTTEEEEEEEEESGGGTTSSHHHHHHHHHHHHHHHT CS
  Acetyltransf_1  44 liGfisllkipdekggvayieslaVspeyrgkGlGsaLlealeeraree 92 
                     l+G+ s  k      +++ +  +   p+y+ +G+G++L++   e  ++e
      EPX73085.1 304 LVGYFSKEKESA---ENYNLACILTLPQYQQHGYGKLLIQFSYELSKKE 349
                     777775555444...89999999****************9988877765 PP

>> Chromo  Chromo (CHRromatin Organisation MOdifier) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   7.1e-05      0.16       6      43 ..      40      75 ..      38      80 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 7.1e-05
                EEEEEEETTEECEEEEEEETTSTGGGTEEEEGGGCSSH CS
      Chromo  6 IidhrtdkdgleleYlVKWkglpysentWEpeenlekc 43
                I+  +++ +g    Y+V++ +++   + W ++en++ +
  EPX73085.1 40 ILMIQKKASGT--FYYVHYDDYNKRLDEWITIENIDLK 75
                66667777777..9*********************855 PP

>> Agenet  Agenet domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   9.5e-05      0.21      14      54 ..      32      70 ..      23      75 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 9.5e-05
      Agenet 14 rGaWfrAtilkv...kegdkylVeYddlddddgskpleEwvdas 54
                +G + +A il +    +g  y+V Ydd       k+l Ew+  +
  EPX73085.1 32 DGEYRKAEILMIqkkASGTFYYVHYDD-----YNKRLDEWITIE 70
                6789999999995544455********.....999999999765 PP

>> IF2_N  Translation initiation factor IF-2, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.1       3.5   7.9e+03      39      47 ..     147     155 ..     146     155 .. 0.87
   2 ?   10.5   0.0   0.00018      0.41       4      30 ..     386     411 ..     384     418 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 3.5
       IF2_N  39 LDeetaeli 47 
                 LDe++++++
  EPX73085.1 147 LDEDEKQKV 155
                 9****9986 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00018
       IF2_N   4 irVyeLAkeLgvkskevikkLfkelGi 30 
                 +++ eLA++  ++ ++v+++L + l +
  EPX73085.1 386 TTIDELANKTAMTTNDVLHTLQA-LDM 411
                 89*******************44.765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (464 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       718  (0.0400469); expected 358.6 (0.02)
Passed bias filter:                      452  (0.0252106); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.69u 0.31s 00:00:01.00 Elapsed: 00:00:00.52
# Mc/sec: 2666.24
//
Query:       EPX73086.1  [L=487]
Description: cytoskeletal signaling protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0087   16.6   0.2      0.023   15.2   0.0    1.8  2  PH        PH domain
  ------ inclusion threshold ------
      0.019   15.5   1.5       0.12   12.9   0.1    2.2  2  IZUMO     Izumo sperm-egg fusion, Ig domain-associated
      0.037   14.3   0.4        1.8    8.8   0.2    2.7  2  Phasin_2  Phasin protein


Domain annotation for each model (and alignments):
>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       2.2   1.3e+04      27      51 ..      38      62 ..      31      76 .. 0.61
   2 !   15.2   0.0   3.8e-06     0.023       2     102 ..     290     390 ..     289     393 .. 0.78

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 2.2
                TTEEEEESSTTCTTESSEEEEEEST CS
          PH 27 dsellyykndksekdkepkgsisls 51
                ++ ++++k+ +s ++++ k+ + ls
  EPX73086.1 38 ENLISFFKQLESLSKSTSKEYLKLS 62
                5566777766444444444444444 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 3.8e-06
                 EEEEEEEEETSSSSCSEEE.EEEEEETTEEEEESSTTCTTESSEEEEEESTTEEEEEEECTTSSSSTSEEEEEESTSSS....T.EEEEEEESSHHHHH CS
          PH   2 vkeGwLlkkgsgkkkswkk.rwfvLkdsellyykndksekdkepkgsislsncevvevvatedpkrkfcfelriverng....s.rtyllqasseeerk 94 
                 ++ G+L++k+   k + ++  +++ +++ l+ +k+++   d ep   + + +  + +      +++k +f+++ +  ++    s + y ++as++ e+ 
  EPX73086.1 290 IIAGYLIRKTTIMK-KKQRgFYAFTRSGYLYEFKSSDPQVDPEPEFALYIPDSLIGR-----PSDKKAKFKITGKDATNkvfgSrSDYSFRASNQVELM 382
                 57899999999887.55552444444566*******999999999*9********98.....789999999955555554444259************* PP

                 HHHHHHHH CS
          PH  95 eWikaiqs 102
                 +W +a++ 
  EPX73086.1 383 KWWEALNT 390
                 *****986 PP

>> IZUMO  Izumo sperm-egg fusion, Ig domain-associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1     2e-05      0.12      18     109 ..      38     129 ..      28     136 .. 0.88
   2 ?    1.2   0.2     0.081   4.8e+02      82     109 ..     197     225 ..     169     260 .. 0.57

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2e-05
                 HTHHHHHSGGHHHHHHHHHHHHHTTT---SGGGGGGSEEEHHHHHHHHHHHHHHHHHHHHS---HHHHHH.HHHHHHHHHHHHHHHHHHHHHH CS
       IZUMO  18 edllpselehreklleraealledlsekelaenkflgvvdeetlekvasslkkelkrltdsdlkgelllk.eLlwllqkqkkklkealkefqk 109
                 e+l+ s +++ e+l +   +++++ls+   + +k +   de+ +++v  +l++++  +++++ + +  l   ++++l+ + + lke+ k+++ 
  EPX73086.1  38 ENLI-SFFKQLESLSKSTSKEYLKLSKTITHPSKDVNIFDEHGVQDVFAALRDQTAAISTDNEQLSIQLPgAIIKVLELLRDDLKEHCKKINA 129
                 4442.345899************************************************999999988888****************999876 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.081
                 HHHHHHHH.HHHHHHHHHHHHHHHHHHHH CS
       IZUMO  82 gelllkeL.lwllqkqkkklkealkefqk 109
                     ++eL + + q++++k+k ++++f+ 
  EPX73086.1 197 SVAQIQELsFRFEQNTISKIKDIIRQFEV 225
                 33333444223334444455555554443 PP

>> Phasin_2  Phasin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0     0.032   1.9e+02      67      95 ..      33      61 ..      30      64 .. 0.88
   2 ?    8.8   0.2   0.00031       1.8      24      68 ..     215     259 ..     196     261 .. 0.86

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.032
    Phasin_2 67 aqpalekavayarklaelaaktqeeaakl 95
                ++ ++e++++ +++l  l+ +t +e  kl
  EPX73086.1 33 WRHLVENLISFFKQLESLSKSTSKEYLKL 61
                678999*******************9997 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00031
    Phasin_2  24 gaeklaelqleaarasleeslaaakallsakdpqellelqselaq 68 
                  +++++++   ++++++ +s+++++++l++  +q l + +s++a+
  EPX73086.1 215 KIKDIIRQFEVLMNQTFTKSINHVREVLQVSEAQTLTAEWSSYAK 259
                 56666666667899*****************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (487 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1058  (0.0590105); expected 358.6 (0.02)
Passed bias filter:                      585  (0.0326287); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.69u 0.31s 00:00:01.00 Elapsed: 00:00:00.51
# Mc/sec: 2879.06
//
Query:       EPX73087.1  [L=734]
Description: zds family protein phosphatase type A regulator Zds1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.6e-30  103.1   0.6    9.6e-30  102.1   0.6    1.6  1  Zds_C     Activator of mitotic machinery Cdc14 phosphatase ac


Domain annotation for each model (and alignments):
>> Zds_C  Activator of mitotic machinery Cdc14 phosphatase activation C-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.1   0.6   5.3e-34   9.6e-30       2      51 ..     619     668 ..     618     669 .. 0.97

  Alignments for each domain:
  == domain 1  score: 102.1 bits;  conditional E-value: 5.3e-34
       Zds_C   2 pdvvmydtRfpihvERaiYRlsHlKLanprRpLreQVLlSNfMYsYLnlv 51 
                 pd+++y++Rfpi++ERaiYRlsH+KL+n++RpL +QVLlSNfMYsYL+l+
  EPX73087.1 619 PDKDYYWSRFPICTERAIYRLSHIKLSNAQRPLVQQVLLSNFMYSYLDLI 668
                 899*********************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (734 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1147  (0.0639746); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.81u 0.33s 00:00:01.14 Elapsed: 00:00:00.55
# Mc/sec: 4002.06
//
Query:       EPX73088.1  [L=1647]
Description: ubiquitin-protein ligase E3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.7e-72  243.8   0.0    6.2e-72  242.7   0.0    1.6  1  HECT           HECT-domain (ubiquitin-transferase)
  ------ inclusion threshold ------
       0.11   12.5   2.1       0.52   10.3   0.0    2.8  2  UNC45-central  Myosin-binding striated muscle assembly centra
       0.51   10.7  10.2        1.4    9.2  10.2    1.8  1  Vfa1           AAA-ATPase Vps4-associated protein 1
        7.7    5.8  29.3         16    4.8  29.3    1.4  1  SDA1           SDA1


Domain annotation for each model (and alignments):
>> HECT  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  242.7   0.0   1.4e-75   6.2e-72       2     307 .]    1326    1647 .]    1325    1647 .] 0.93

  Alignments for each domain:
  == domain 1  score: 242.7 bits;  conditional E-value: 1.4e-75
                  HHHHHHT-GGGSSEEESSTTSSSEEE-TTHHHHS................HHHHHHHHHHHHHTT--BSS-B-HHHHHHHTT-.---TCHHHHH-HH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT    2 llskelldpklglfeeesedsgtlypkpssseee............llklfeflGkvlGkaiyeeilldlpfsraflkfllgeekitledleeidpe 86  
                   +s+e++++ l ++++e+ ds+++ + +    +             +l+lf  lGk+++++iy++++++l+ +++f+   +    +t++ ++++d+ 
  EPX73088.1 1326 TVSREFTNTALDIWRNEQGDSQYVFHASGLFPSPismaegsdeskrKLSLFSALGKFVARSIYDSRIVSLQCNPLFFARAIP---LTISSVAKVDKG 1419
                  689999999999**776666666555544333337888889****97899**************************988655...9*********** PP

                  HHHHHHHHH..HS-GGG.........GT-BSEEEEETTEEEEEESSTTGGGSB--TTTHHHHHHHHHHHHHTGGGHHHHHHHHHHHHTTS-HHHHTT CS
                  xxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT   87 lakslkellslesntee......vedlaLtFtipenagasatieLipnGanipVtnenkkeYiklyvnyllkksvekqleaflkGfsevipskalkl 177 
                  la+sl++l+sl s ++       +e+l+L+Ft+p   g+s +ieLipnG++++V+++n+k+Yi+ ++++++ k+v++q+e f++Gfs+v+  ++lk+
  EPX73088.1 1420 LANSLRYLESLISGEDGhindidIESLGLDFTLP---GYS-SIELIPNGSTVSVNKSNLKDYIEHIIDFTVGKGVRRQIECFQEGFSSVFAYSSLKV 1512
                  *********99888766899999***********...***.******************************************************** PP

                  S-HHHHHHHHBCSSS.--HHHHHHTEEEETT--TTSHHHHHHHHHHHHS-HHHHHHHHHHHHSSSS--TTCGGG-B--EEEEE-S......-TTS-- CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxx RF
        HECT  178 fdaeelellisGedelidvedlrrnteykggynaesetiewlweilkefspeekrlfLqFvTgssrlPlgGfaelhpkftierksk....edetrLP 270 
                  +++ el++l+   de+++ e+l + +++++gy+ es  i+ l++ +++++ +e+r+fLqF+Tgs++lP+gGfa ++p+fti+r+ +    +++++LP
  EPX73088.1 1513 LTEYELSSLFGTIDEDWSYETLLKFVVADHGYTIESAPIQRLLQLMSSMNFREQRDFLQFITGSRKLPIGGFAGMNPPFTIVRRLNeppyKPDDYLP 1609
                  **********99999********************************************************************99999999****** PP

                  EEEGGGTEEEE---SSHHHHHHHHHHHHHHH.H--XXX CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxx RF
        HECT  271 tahTCfnlLklpdYsskeilkekLltAieet.egFels 307 
                  t++TC+n+Lklp+Yss ++l ++L  Ai e+  +F+ls
  EPX73088.1 1610 TVMTCVNYLKLPEYSSVDVLASRLSKAILEGqGSFHLS 1647
                  *******************************6779986 PP

>> UNC45-central  Myosin-binding striated muscle assembly central
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.8      0.18   8.1e+02      21      99 ..     523     610 ..     511     631 .. 0.64
   2 ?   10.3   0.0   0.00012      0.52      41      90 ..     752     803 ..     651     820 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.18
                    HHHHHHHHHH...HHHHHHHHHHHHHHHHHHHSCCTHHHHHHHHHHHHHH...HHSSHHHHHHHHTSTTHHHHHHHHHHS.....S-HH CS
  UNC45-central  21 lallilskll...daakeefeeaiseflesllekgdeddllnalsvltal...Fpvvpdvasalflsegflesllelves....kkskk 99 
                    +a  + + ++   d+ + ef e i + l++ l+++d   +++++++l+++   +  +p+++++l+ + ++++++++ ++     kk  +
     EPX73088.1 523 TAISLSANCCkhiDEFNVEFAEEIIPLLSNTLQSSDPVVVMKGFECLESIiesLNFSPNIIKSLINE-DLISIVTKALNAstmqKKATD 610
                    5554555555777888888888888888888888888888888888887733345667777666644.555555555443333334444 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00012
                    HHHHHHHHH..SCCTHHHHHHHHHHHHHHHHSSHHHHHHHHTSTTHHHHHHH CS
  UNC45-central  41 iseflesll..ekgdeddllnalsvltalFpvvpdvasalflsegfleslle 90 
                    +s f+ s+l  +k d+ ++ nal+++  l + +pd+ ++lf +eg+++ ++ 
     EPX73088.1 752 LSSFIASILsaRKADNHSKQNALEMAIYLHEALPDIYHSLFIREGVVQEVGY 803
                    56788888888999*********************************99875 PP

>> Vfa1  AAA-ATPase Vps4-associated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2  10.2   0.00032       1.4      78     159 ..     222     306 ..     158     321 .. 0.63

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00032
        Vfa1  78 eyeekqkkkkekekkkkekd....kkdkdkkkekekdkkkekek.eeekkkelkkaeeeleekeeprvkkykLhkefyqsRlerkrq 159
                 +y+e+++++++++++++  d    +++++++ ++ +d+++e+e+ +e+k++e +++ee+ e++ + r+  +  ++++++ R  r  +
  EPX73088.1 222 DYDENSDSSTNDTNNND--DnyddQESNNDNGDEGHDDSDEDEEdDEDKEEEEEEEEEKDEDDYSFRNVAFRSSDDIFRRRSGRNFR 306
                 34444433333333321..12232222222223333333333322444444444444555557889999999999***999887644 PP

>> SDA1  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8  29.3    0.0035        16      98     178 ..     215     281 ..     168     338 .. 0.46

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0035
        SDA1  98 eddeedwevesdddseedseggwidvesdeeeieesdesedeeeeeeeeeekeekeeeeeeeeeeeeeeeeeeeeeekekk 178
                 +++            e+d + +  + +s ++ ++ +d+ +d e+++++ +e +++++e+ee+  +e++eeeeeeeeek+++
  EPX73088.1 215 NSN------------EDDYDYDENSDSSTNDTNNNDDNYDDQESNNDNGDEGHDDSDEDEED--DEDKEEEEEEEEEKDED 281
                 111............11111111111111112222222222222222222222222222221..11122222111111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1647 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1256  (0.0700541); expected 358.6 (0.02)
Passed bias filter:                      570  (0.0317921); expected 358.6 (0.02)
Passed Vit filter:                       131  (0.0073066); expected 17.9 (0.001)
Passed Fwd filter:                        29  (0.00161749); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.34u 0.35s 00:00:01.69 Elapsed: 00:00:00.54
# Mc/sec: 9192.23
//
Query:       EPX73089.1  [L=239]
Description: hypothetical protein SOCG_00845 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0026   16.8   0.3     0.0037   16.3   0.3    1.1  1  FecCD     FecCD transport family
  ------ inclusion threshold ------
      0.038   13.5   3.7        2.6    7.4   0.2    2.5  2  Pho86     Inorganic phosphate transporter Pho86
      0.095   13.5   0.0       0.18   12.6   0.0    1.4  1  TMEM220   Transmembrane family 220, helix


Domain annotation for each model (and alignments):
>> FecCD  FecCD transport family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.3   6.2e-07    0.0037      94     182 ..      33     122 ..      22     126 .. 0.76

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 6.2e-07
       FecCD  94 l...lgslslfalplaaflgallalllvlllarkrkgasplkliLaGiavsallsaltsllllllneealesilfwllGslsgaswskvlll 182
                 +    +s+++f+ p+  ++++l+ ++++ +   + +g + l+ +L G+ vsa++  ++++   +l  +++++ ++  +G+l   ++++++l+
  EPX73089.1  33 GqskNLSQQIFWHPVYLIAFGLVFMGVFRMAN-MAEGNTFLRTVLLGVFVSAFFLTIMEIPCRNLF-SSIADEMTEDTGNLRDENLKHFYLA 122
                 24555678899999999999999888777666.************************999887743.4666666667788877777777765 PP

>> Pho86  Inorganic phosphate transporter Pho86
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.4   0.00079       4.7      44      71 ..      36      63 ..      26     126 .. 0.70
   2 ?    7.4   0.2   0.00044       2.6     213     267 ..     163     207 ..     158     224 .. 0.78

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.00079
       Pho86 44 aklnkyllwhpitlsvvllvlliylayk 71
                 +l+++++whp+ l+++ lv++ ++ + 
  EPX73089.1 36 KNLSQQIFWHPVYLIAFGLVFMGVFRMA 63
                4689********9999888777655433 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.00044
       Pho86 213 ledLidwallrtrellkeykkkkkgssikllidvYSfDkelkktLkkkgFkliss 267
                   dL+d al +++++ ++          k+ ++v+++Dk +   Lk+ gF+ +  
  EPX73089.1 163 AYDLLDVALNKAKTMKQN----------KVSAEVFTTDKWILASLKSDGFEPVVD 207
                 567777777777776665..........5789******************98865 PP

>> TMEM220  Transmembrane family 220, helix
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   3.1e-05      0.18      16      74 ..      42     104 ..      39     121 .. 0.56

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 3.1e-05
     TMEM220  16 elWvtvYllaallcllaalgaavk...esslaralalllllaalllalawlak.leavllnes 74 
                 ++W +vYl+a  l ++ +++ a     +++l+++l  +++ a++l +++ +   l ++++ e+
  EPX73089.1  42 IFWHPVYLIAFGLVFMGVFRMANMaegNTFLRTVLLGVFVSAFFLTIMEIPCRnLFSSIADEM 104
                 79********99999998888733332333333333333333333334544330333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       695  (0.038764); expected 358.6 (0.02)
Passed bias filter:                      501  (0.0279436); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.48
# Mc/sec: 1487.58
//
Query:       EPX73090.1  [L=539]
Description: WDR20 family WD repeat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.3e-09   37.7   7.2    0.00088   20.0   0.1    5.0  4  WD40            WD domain, G-beta repeat
    1.2e-05   25.5   0.0      0.036   14.4   0.0    3.3  3  ANAPC4_WD40     Anaphase-promoting complex subunit 4 WD40 dom
     0.0002   21.3   0.0      0.041   13.7   0.0    2.4  2  eIF2A           Eukaryotic translation initiation factor eIF2
     0.0012   18.8   0.0       0.32   11.0   0.1    2.8  2  PD40            WD40-like Beta Propeller Repeat
  ------ inclusion threshold ------
      0.049   11.6   0.0       0.97    7.3   0.0    2.0  2  IKI3            IKI3 family
       0.13   11.6   0.0       0.92    8.8   0.0    2.0  2  WD40_like       WD40-like domain
        7.5    6.8  10.2         28    5.0   1.8    3.9  3  GluR_Homer-bdg  Homer-binding domain of metabotropic glutamat


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.047   1.2e+02      11      35 ..     319     343 ..     309     344 .. 0.82
   2 !   20.0   0.1   3.4e-07   0.00088      11      37 ..     361     387 ..     350     388 .. 0.81
   3 !    6.8   0.6    0.0054        14       3      38 .]     394     435 ..     392     435 .. 0.71
   4 !    6.9   0.1    0.0049        13      12      37 ..     511     534 ..     500     535 .. 0.71

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.047
                 SSEEEEEEETTSSEEEEEETTSEEE CS
        WD40  11 ssvtslafspdgawlasGsdDgtvr 35 
                 s++++++ spd++ la  s+ gt++
  EPX73090.1 319 SPINAFSISPDQQHLAVVSERGTLK 343
                 5699999********9878777776 PP

  == domain 2  score: 20.0 bits;  conditional E-value: 3.4e-07
                 SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  11 ssvtslafspdgawlasGsdDgtvriW 37 
                 ++ +++a+spdg+++a+G++D  + ++
  EPX73090.1 361 GGLSCIAWSPDGKFIATGGKDDMLSVY 387
                 3389****************9988876 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.0054
                 EEEEEESS.SSEEEEE....EETTSSE......EEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtsla....fspdgaw......lasGsdDgtvriWd 38 
                 ++  + GH s+v ++                  +as + D+ + +Wd
  EPX73090.1 394 LVARCQGHkSWVLGITfdrwR-----CkddsyrIASVGLDCQLLLWD 435
                 566789**7779999655552.....0455556888788*******9 PP

  == domain 4  score: 6.9 bits;  conditional E-value: 0.0049
                 SEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  12 svtslafspdgawlasGsdDgtvriW 37 
                 +vts+ f+  ++ ++++s +g +r+W
  EPX73090.1 511 PVTSIVFQ--SDCMITCSLNGRIRVW 534
                 47777443..334568999******* PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.048   1.2e+02      36      70 ..     234     269 ..     224     287 .. 0.80
   2 ?    3.9   0.0     0.025        64      38      70 ..     318     350 ..     312     361 .. 0.84
   3 !   14.4   0.0   1.4e-05     0.036      42      81 ..     364     403 ..     357     415 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.048
  ANAPC4_WD40  36 kedsevrsLaWkpd.gklLavaysdgevrlldaesg 70 
                   ++s v++++W p+ ++++ v++++g +  +d +++
   EPX73090.1 234 FNNSPVSNIQWLPNqENVFLVSFQNGWMIYYDKNQQ 269
                  57899******98736899******99888887654 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.025
  ANAPC4_WD40  38 dsevrsLaWkpdgklLavaysdgevrlldaesg 70 
                  +s +++++ +pd + Lav+ + g+++ll  e+ 
   EPX73090.1 318 NSPINAFSISPDQQHLAVVSERGTLKLLLYEEL 350
                  678999999*****************9977765 PP

  == domain 3  score: 14.4 bits;  conditional E-value: 1.4e-05
  ANAPC4_WD40  42 rsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  +++aW+pdgk++a + +d  +++++  + k+v  ++ +++
   EPX73090.1 364 SCIAWSPDGKFIATGGKDDMLSVYSFPQRKLVARCQGHKS 403
                  689*****************************99988776 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.1   0.1    0.0071        18      70     143 ..     199     279 ..     146     301 .. 0.62
   2 !   13.7   0.0   1.6e-05     0.041      49     138 ..     309     395 ..     305     407 .. 0.82

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0071
                 TSS-EE.EEESSSSCEEEEEEC......SCEEEEEEEEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETT..TTEEEEEEE- CS
       eIF2A  70 kskefa.viyGkmpakvslfdl......kvkviskleeqkrNtiffspkgklvllaGfgnlaGeleiwdvk..kkkkiakaea 143
                 ks++f+ +i G+   +v  +d       + ++  ++++++   i + p+++ v l  f+n  G +  +d++  +k+ +a++ +
  EPX73090.1 199 KSSKFLeIIIGFDTGDVMWYDPisykylRFNKGGSFNNSPVSNIQWLPNQENVFLVSFQN--GWMIYYDKNqqEKQLYASIPE 279
                 444443377777777777777755544447777777777777888888888888777776..666666665333444444444 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 1.6e-05
                 --EEECCEESSS.EEEEEE-TTSS-EEEEESSSSCEEEEEECS.CEEEEEEEEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEE CS
       eIF2A  49 kksevvelkkegpihdvaWspkskefaviyGkmpakvslfdlk.vkviskleeqkrNtiffspkgklvllaGfgnlaGeleiwdvkkkkki 138
                 +++  + l++  pi +++ sp+++++av+      k  l++   +  +++       +i +sp gk+++++G  ++   l+++   ++k +
  EPX73090.1 309 NPIACIALSNS-PINAFSISPDQQHLAVVSERGTLKLLLYEELgMLDVFHSYFGGLSCIAWSPDGKFIATGGKDDM---LSVYSFPQRKLV 395
                 67778889777.9***************************99546667777788999***************8888...666666555555 PP

>> PD40  WD40-like Beta Propeller Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.013        34       9      30 ..     319     340 ..     316     347 .. 0.86
   2 !   11.0   0.1   0.00012      0.32      13      24 ..     365     376 ..     361     376 .. 0.91

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.013
                 S.EEEEEE-TTSSEEEEEEECT CS
        PD40   9 gnegaPsfSPDGkrlaFsSdRg 30 
                 +++ a+s+SPD + la +S+Rg
  EPX73090.1 319 SPINAFSISPDQQHLAVVSERG 340
                 557899**************98 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00012
                 EEEE-TTSSEEE CS
        PD40  13 aPsfSPDGkrla 24 
                 ++++SPDGk +a
  EPX73090.1 365 CIAWSPDGKFIA 376
                 89*******997 PP

>> IKI3  IKI3 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0     0.014        36      44     142 ..     163     258 ..     140     267 .. 0.73
   2 ?    7.3   0.0   0.00038      0.97      72     136 ..     315     376 ..     262     386 .. 0.76

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.014
                 XX.XXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXX CS
        IKI3  44 eseaaievqrfekdsevevlasleaeeleekkdkivsveyladkeelvlalasGdillvtvds.daeekeveivGsiesG.ieaaawspdeellalvtg 140
                 es + ++++++ ++s   +l+ ++ + ++  +++i      +   e+++ + +Gd++ +  d+ +++    +  Gs +++ ++ ++w p++e + lv+ 
  EPX73090.1 163 ESFYWLDLSNSGTHS---TLLRIDFHRSRPVCHHINEYTKSSKFLEIIIGFDTGDVMWY--DPiSYKYLRFNKGGSFNNSpVSNIQWLPNQENVFLVSF 256
                 444555555555555...3333333344566666666666667789************9..77899999******998655**************9987 PP

                 XX CS
        IKI3 141 ee 142
                 ++
  EPX73090.1 257 QN 258
                 65 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.00038
                 .XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        IKI3  72 eekkdkivsveyladkeelvlalasGdillvtvdsdaeekeveivGsiesGieaaawspdeella 136
                   +++ i ++   +d+++l ++++ G + l+ +    e   +++  s   G++++awspd+  +a
  EPX73090.1 315 ALSNSPINAFSISPDQQHLAVVSERGTLKLLLY---EELGMLDVFHSYFGGLSCIAWSPDGKFIA 376
                 556677889999999***********9988844...567899999999************98776 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0      0.17   4.4e+02     160     200 ..     238     279 ..     204     298 .. 0.62
   2 ?    8.8   0.0   0.00036      0.92       6      40 ..     366     400 ..     363     410 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.17
   WD40_like 160 diktfeii.enkdilligtegeililkknvilqkidvegkPe 200
                  +++++ + ++++++l+++++  +i+ ++   +k    ++Pe
  EPX73090.1 238 PVSNIQWLpNQENVFLVSFQNGWMIYYDKNQQEKQLYASIPE 279
                 445556663344667777777777766666555555555555 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00036
   WD40_like   6 idiskkgslilyGgkddkctvlkleslesvsives 40 
                 i  s++g++i+ Ggkdd + v+++++ ++v   ++
  EPX73090.1 366 IAWSPDGKFIATGGKDDMLSVYSFPQRKLVARCQG 400
                 66799********************9999876665 PP

>> GluR_Homer-bdg  Homer-binding domain of metabotropic glutamate receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.9     0.052   1.3e+02      34      50 ..      95     111 ..      58     112 .. 0.67
   2 ?    5.0   1.8     0.011        28      31      49 ..     133     151 ..     115     152 .. 0.73
   3 ?    1.1   0.0      0.18   4.7e+02      15      25 ..     231     241 ..     227     249 .. 0.85

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.052
  GluR_Homer-bdg  34 prYtsliLrdYsqSSSs 50 
                       Y+s   + Y +SSSs
      EPX73090.1  95 ENYKSSKRKSYTHSSSS 111
                     46888889999999998 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.011
  GluR_Homer-bdg  31 ppsprYtsliLrdYsqSSS 49 
                       s ++ ++iLr +s SSS
      EPX73090.1 133 ISSITFYENILRSFSNSSS 151
                     35889999**********9 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.18
  GluR_Homer-bdg  15 lssssgSPvse 25 
                     + s+++SPvs+
      EPX73090.1 231 GGSFNNSPVSN 241
                     789******97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (539 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       524  (0.0292264); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.70u 0.34s 00:00:01.04 Elapsed: 00:00:00.54
# Mc/sec: 3003.90
//
Query:       EPX73091.1  [L=413]
Description: tubulin-tyrosine ligase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      6e-59  199.6   0.5      8e-59  199.2   0.5    1.2  1  TTL              Tubulin-tyrosine ligase family
     0.0001   21.7   0.0     0.0033   16.7   0.0    2.2  2  ATPgrasp_YheCD   YheC/D like ATP-grasp
  ------ inclusion threshold ------
      0.011   15.8   0.0        5.4    7.0   0.0    2.4  2  ATP-grasp_3      ATP-grasp domain
      0.061   12.9   0.1        0.5   10.0   0.0    2.5  3  ATP-grasp_4      ATP-grasp domain
      0.062   12.5   0.0       0.24   10.6   0.0    1.9  2  ATPgrasp_ST      Sugar-transfer associated ATP-grasp
      0.076   12.5   0.0       0.22   11.0   0.0    1.7  1  Dala_Dala_lig_C  D-ala D-ala ligase C-terminus
      0.099   12.8   0.1       0.32   11.1   0.0    1.8  2  DUF2652          Protein of unknown function (DUF2652)


Domain annotation for each model (and alignments):
>> TTL  Tubulin-tyrosine ligase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  199.2   0.5   3.1e-62     8e-59      19     293 ..      74     393 ..      57     395 .. 0.95

  Alignments for each domain:
  == domain 1  score: 199.2 bits;  conditional E-value: 3.1e-62
                 EE--------------------....-------TTHHHHHHHTTTS--S-.................B----SS---XX------BSSTHHHHHH.... CS
         TTL  19 eitrkdllvknlkrtkkklekk..lkflprtfvlpadlaefveeaekees.................ntwIvKpsasarGkgirvfnkledikki.... 94 
                  + rk++l++ +  +  k+ ++  + ++p++f+l+ d+aef+++   e+                  +++I+Kps+ +  +gir+f+++e++++i    
  EPX73091.1  74 ALIRKEYLWNTVVYYLAKNPNSilKTAVPEAFSLELDYAEFLDDSLMESYelrqelennealepqqrKWYILKPSMCDGAQGIRIFSTIEELQAIfdsf 172
                 56799999999999999999999999*****************9988877789*****************************************9**** PP

                 ....................................HH..SSS-EEEEB--SSB--BTTEEEEEEEEEEE-..TT-XXXXXXXXXXXXXXXXXX...XX CS
         TTL  95 ....................................vsqsqkeplvvqkYierPLLidgrKFDlRlyvlvtsvnpLrvYvYkegllRfasvkYsp.svs 156
                                                       ++q ++++vqkYi +PLL+++rKF++R yvl  +   L+vY++ke+l+++a+++Y++ +v 
  EPX73091.1 173 dealsdedeelnksscenevenadtctvndrnpenkIVIHQIRHFLVQKYIANPLLLNNRKFHIRAYVLAVG--GLSVYLFKEMLCLLARDEYKSpHVG 269
                 **********************************99999*******************************99..*******************9989** PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
         TTL 157 dlddlevHLTNysiqkkskslneesnekkgkkwslqelekyleevrkeeiweeiesiiiktilaaeveasrlnvqrlkncfelyGvDilidenlkpwLl 255
                 +  +l+  L+N++iq +             ++ s+q++++ + + +ke+i++++ ++  ++++aa ++++r ++q+l+n+fe++GvD+++de+ ++ Ll
  EPX73091.1 270 SEINLYSQLSNTCIQGE-----------APREASVQAFWNSSIK-NKEKIFDSLVQTLGDVFEAA-ATTQRIHFQPLNNSFEIFGVDFMVDEADQVHLL 355
                 *****************...........88999******98776.********************.********************************* PP

                 XXXXXX..XXXXXXXXXXXXXXXXXXXX.XXXXXXXXX CS
         TTL 256 EvNasPdlksttkldaelkeeliddvlnlvvvppdkek 293
                 EvNa+Pd+ +t+   + l+e+l+++v+    vp +++k
  EPX73091.1 356 EVNAYPDFRQTGDELSGLVERLFKSVVHTAIVPFFDSK 393
                 ****************************5556655554 PP

>> ATPgrasp_YheCD  YheC/D like ATP-grasp
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0     0.026        67      51     130 ..     143     240 ..     108     241 .. 0.54
   2 !   16.7   0.0   1.3e-06    0.0033     185     231 ..     317     364 ..     285     384 .. 0.73

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.026
  ATPgrasp_YheCD  51 vylKpa..nGskGkgilr.iek................eekellllsrekkkkkkkrlaslselesllkkllkkkrylvQqgid.latidgrpfD 125
                      +lKp+  +G +G  i+  ie+                ee +++ +++e ++  + ++++ +  ++++ +++  + +lvQ++i     +++r f 
      EPX73091.1 143 YILKPSmcDGAQGIRIFStIEElqaifdsfdealsdedEELNKSSCENEVENADTCTVNDRNPENKIVIHQI--RHFLVQKYIAnPLLLNNRKFH 235
                     677886446888888887666677777666666653322222222222222233333333333333333333..239*****9615677899999 PP

  ATPgrasp_YheCD 126 fRvlv 130
                     +R+ v
      EPX73091.1 236 IRAYV 240
                     98865 PP

  == domain 2  score: 16.7 bits;  conditional E-value: 1.3e-06
  ATPgrasp_YheCD 185 eleelalelaealeesfgr.lgElGlDlgidkegkvWllEvNskpgrs 231
                     ++ e+a ++ +   + +++ +  +G+D+++d+  +v llEvN+ p  +
      EPX73091.1 317 DVFEAAATTQRIHFQPLNNsFEIFGVDFMVDEADQVHLLEVNAYPDFR 364
                     444555555555556677778899*******************99754 PP

>> ATP-grasp_3  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0    0.0039        10      21      61 ..     128     170 ..     111     179 .. 0.76
   2 ?    7.0   0.0    0.0021       5.4     131     156 ..     333     359 ..     317     362 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0039
                  ...-EESS--..SSSEEEEESS-------B--SS--TTE.... CS
  ATP-grasp_3  21 kleaeeleee..ekklvvKprdGaggesvrvveekeeaeaaie 61 
                  +le++e+ e    k +++Kp+   g++++r++   ee++a+++
   EPX73091.1 128 ELENNEALEPqqRKWYILKPSMCDGAQGIRIFSTIEELQAIFD 170
                  4555555544346789****************99999887766 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0021
                  STT--EEEEEEEEESS..SEEEEEEES CS
  ATP-grasp_3 131 leglaGyvGvDlvlkd.eepyviEvNP 156
                  l++ + ++GvD+++ + ++ +++EvN+
   EPX73091.1 333 LNNSFEIFGVDFMVDEaDQVHLLEVNA 359
                  55666789*******9999*******7 PP

>> ATP-grasp_4  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       1.3   3.4e+03      69     102 ..      56      90 ..      51      99 .. 0.75
   2 ?   10.0   0.0   0.00019       0.5       6      50 ..     144     188 ..     140     193 .. 0.88
   3 ?   -1.3   0.0      0.58   1.5e+03     133     150 ..     342     359 ..     302     362 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1.3
  ATP-grasp_4  69 dayfdeeGepvilnilkkefaseedvsdrl.yvts 102
                  d ++   G+     +++k    +e++ +++ y+++
   EPX73091.1  56 DKLYSDAGTMACSYVIRKALIRKEYLWNTVvYYLA 90 
                  77888888888888888888888887666547765 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00019
  ATP-grasp_4   6 viKPsvgffSlGVykinneeewkaavaaieeeleqakeeykeevv 50 
                  ++KPs++ + +G+++ ++ ee++a +++ +e l+   ee +++  
   EPX73091.1 144 ILKPSMCDGAQGIRIFSTIEELQAIFDSFDEALSDEDEELNKSSC 188
                  9*****************************999888888777655 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 0.58
  ATP-grasp_4 133 iElrvsedgkiipiEvnp 150
                  + + v+e+ +++++Evn+
   EPX73091.1 342 VDFMVDEADQVHLLEVNA 359
                  678899999999999998 PP

>> ATPgrasp_ST  Sugar-transfer associated ATP-grasp
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.37   9.4e+02      59      86 ..     139     166 ..     117     225 .. 0.73
   2 ?   10.6   0.0   9.3e-05      0.24     243     282 ..     338     376 ..     326     382 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.37
  ATPgrasp_ST  59 leeg.vviKpakgsgGkGilviteredqd 86 
                    +  +++Kp    g +Gi++ + +e+ +
   EPX73091.1 139 Q-RKwYILKPSMCDGAQGIRIFSTIEELQ 166
                  3.223899999999999999988766543 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 9.3e-05
  ATPgrasp_ST 243 gylGwDivldeekgplllElNarpglaivqiangegllpr 282
                   ++G+D+ +de  ++ llE+Na p+      ++ +gl +r
   EPX73091.1 338 EIFGVDFMVDEADQVHLLEVNAYPDFRQ-TGDELSGLVER 376
                  689********************99877.55677777777 PP

>> Dala_Dala_lig_C  D-ala D-ala ligase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   8.7e-05      0.22     157     179 ..     342     364 ..     330     369 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 8.7e-05
                      EEEEEETTTEEEEEEEESS---S CS
  Dala_Dala_lig_C 157 vDfflteegeivlnEvNtlPGfT 179
                      vDf+++e +++ l EvN  P f 
       EPX73091.1 342 VDFMVDEADQVHLLEVNAYPDFR 364
                      9*******************885 PP

>> DUF2652  Protein of unknown function (DUF2652)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00012      0.32       8      62 ..      27      80 ..      22      86 .. 0.87
   2 ?   -2.7   0.0       2.5   6.3e+03      71      71 ..     190     190 ..     160     216 .. 0.46

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00012
     DUF2652  8 iidanklglklseieGDAvlfyklgealtleelleqveamrkaFhkklkllekdr 62
                ++++    lk  + + DA lf+++ e++++++l++ + +m +++  ++ l++k++
  EPX73091.1 27 LVESGI-PLKFVDSKADAKLFWAQYEDIDFDKLYSDAGTMACSYVIRKALIRKEY 80
                555555.89999999*****************************99999888775 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 2.5
     DUF2652  71 q 71 
                 +
  EPX73091.1 190 N 190
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (413 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       695  (0.038764); expected 358.6 (0.02)
Passed bias filter:                      526  (0.0293379); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.63u 0.29s 00:00:00.92 Elapsed: 00:00:00.49
# Mc/sec: 2527.26
//
Query:       EPX73092.1  [L=486]
Description: intermediate cleavage peptidase Icp55 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.5e-48  165.3   0.0      3e-48  164.3   0.0    1.5  1  Peptidase_M24  Metallopeptidase family M24
    2.2e-26   92.0   0.0    4.2e-26   91.1   0.0    1.5  1  AMP_N          Aminopeptidase P, N-terminal domain
  ------ inclusion threshold ------
        0.1   12.9   0.0        0.2   12.0   0.0    1.5  1  GAF_2          GAF domain
       0.12   12.7   0.0       0.37   11.1   0.0    1.8  1  kleA_kleC      Uncharacterized KorC regulated protein A


Domain annotation for each model (and alignments):
>> Peptidase_M24  Metallopeptidase family M24
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.3   0.0   6.8e-52     3e-48       2     208 ..     238     459 ..     237     460 .. 0.89

  Alignments for each domain:
  == domain 1  score: 164.3 bits;  conditional E-value: 6.8e-52
                    HHHHHHHHHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHHHTTTCEESSSSEEEEGGGGGSTTTBCSSSB--TTEEEEEEEEEEETTEEEEEEEEEE CS
  Peptidase_M24   2 lirkaariasaaleavleaikpgvterelaaeieattlkrhgarglafppivasgenaavlhytpndrvlkegdlvlidagaeydgyasDitrTvl 97 
                    +++ aa+i+  a+++v  + k +  e++laae+e++ +k +g++  a+ p++a g n+  +hyt nd+ ++++d+vl+dag+ey gy++Di+rT+ 
     EPX73092.1 238 CLQHAANISGDAYKEV--MAKDFYEENQLAAELEYR-FKMGGCQRSAYVPVIAGGRNGLCIHYTSNDDAFQQNDMVLVDAGGEYGGYVTDISRTWP 330
                    7899************..569*************66.9*********************************************************8 PP

                    CS.SGSHHHHHHHHHHHHHHHHHHHC-ST..TSBHHHHHHHHHHHHHHT....TB........CCGBSSCSEEEESSSSSEEEEEESSSTTCSSB- CS
  Peptidase_M24  98 vG.kftpeqrelyeavleaqeaaikavkp..Gvtlseidaaarevlesa....gl........akffphglGHgvGlevhdegpsvsresndgrkl 178
                     G  ftp+qr+ly+avl++q+++i+++    G +l+ i+     +l+++    g+           +ph++GH +Gle+hd   s +   n+  +l
     EPX73092.1 331 TGrGFTPAQRDLYQAVLNVQKKCIDLCTSssGLSLARIHYESAVLLKEElkqiGIygskseieDVLYPHSIGHEIGLEIHDC-FS-N---NSFSPL 421
                    8889*********************997336****************95555554788889998889*************99.32.3...4578** PP

                    -TTBEEEEEEEEEEET...TT.....E.EEEEBEEEEEE CS
  Peptidase_M24 179 eeGmvftiEpgiyfap...ge.....g.gvriedtvlvt 208
                    ++++++tiEpgiy +p   ++     g ++ried +lv 
     EPX73092.1 422 KKNQIVTIEPGIY-VPvnnRWpkwaqGiAIRIEDSILVG 459
                    *************.55555335557777*********96 PP

>> AMP_N  Aminopeptidase P, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.1   0.0   9.3e-30   4.2e-26       1     117 [.      62     179 ..      62     185 .. 0.91

  Alignments for each domain:
  == domain 1  score: 91.1 bits;  conditional E-value: 9.3e-30
                 HHHHHHHHHHHS-SSEEEEEE-----EEETTEE------HHHHHHH----SS-EEEEEESSEE.EE...EEEE----HHHHHHH----HHHHHHHHHT- CS
       AMP_N   1 yaerRkrllealpensvvilaagkekyrsgdveypFrqnsdFlYltGfnepdavlvlekeedk.kehkstLfvprkdpekelWdGarlgleeakelfgv 98 
                 y++rR+++++ ++e+ ++i  ++ +ky+ g ++y+++q+ +F+YltG+ epd++l++ ke+d  +++k+  f+p+k  ++e+W+G r+g+e+ k lf++
  EPX73092.1  62 YRARRDNVAALMQEGDLLITTSAAVKYMCGAAFYEYHQDPNFYYLTGCLEPDSILLILKEKDMfENYKLAFFLPPKTSYAEKWEGFRTGIENGKILFHI 160
                 899****************************************************999977776889******************************** PP

                 SEEEEGGGHHHHHHHHHTT CS
       AMP_N  99 deaepidelesalakllkg 117
                 +++++  e + +++++ ++
  EPX73092.1 161 ENIQENWEAPFVIEEFGNR 179
                 *999887777777666555 PP

>> GAF_2  GAF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   4.4e-05       0.2      61     127 ..     248     313 ..     214     322 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 4.4e-05
                 HHHHHTS-EEES-.GGG-S-HHHHH..HHHHTT--EEEEEE-TTS---EEEEES......--HHHHHHHH CS
       GAF_2  61 ealrtgrpvilnd.leedpdkkglp..aghaglrsflavPlisegrvvGvlnlyankppafdeedlelLe 127
                 +a+++   v+  d +ee+     l+      g +++++vP+i++gr   +++ y+++++af + d+ l++
  EPX73092.1 248 DAYKE---VMAKDfYEENQLAAELEyrFKMGGCQRSAYVPVIAGGRNGLCIH-YTSNDDAFQQNDMVLVD 313
                 55555...7888888886666666666999999************9999***.8***********98876 PP

>> kleA_kleC  Uncharacterized KorC regulated protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   8.3e-05      0.37      13      40 ..      55      83 ..      51      91 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 8.3e-05
   kleA_kleC 13 peva.tdlvarRdkiAaklaeAeeLvrqa 40
                p+v+ ++ +arRd++Aa+++e + L    
  EPX73092.1 55 PKVNaDEYRARRDNVAALMQEGDLLITTS 83
                788889**************999887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (486 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       396  (0.0220871); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.62u 0.29s 00:00:00.90 Elapsed: 00:00:00.49
# Mc/sec: 2959.59
//
Query:       EPX73093.1  [L=139]
Description: succinate dehydrogenase subunit Emi5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-25   89.4   0.6    1.4e-25   89.0   0.6    1.2  1  Sdh5      Flavinator of succinate dehydrogenase
  ------ inclusion threshold ------
      0.092   12.0   0.1       0.11   11.7   0.1    1.1  1  LegC3_N   LegC3 N-terminal coiled-coil domain


Domain annotation for each model (and alignments):
>> Sdh5  Flavinator of succinate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.0   0.6   1.6e-29   1.4e-25       1      73 []      49     121 ..      49     121 .. 0.98

  Alignments for each domain:
  == domain 1  score: 89.0 bits;  conditional E-value: 1.6e-29
                 HHHHHHHH.--SSHHHHHTTTTHHHHHTTT--HHHHHHHHHHHTS--HHHHHHHHT-.---S-HHHHHHHHHH CS
        Sdh5   1 raRllyrsrrRGmlElDllLgrFaekhlatlseeeldaferLLdleDpdLldwltgrkeepedaelaallekl 73 
                 raRl+y+sr+RG+lE+DllL++Fa+++l++   ++l++++rLLd++D+d+l+w  g++ +pe+++++++l++l
  EPX73093.1  49 RARLKYQSRKRGILETDLLLSNFAKTRLDKYGVSDLQEYDRLLDEPDWDILYWSSGERVVPEQWRDSKVLKEL 121
                 79*******************************************************************9976 PP

>> LegC3_N  LegC3 N-terminal coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   1.2e-05      0.11     194     222 ..      36      64 ..       7      79 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.2e-05
                 HHHHHHHHHHHHHHHHHHHHHHS---GGG CS
     LegC3_N 194 eRekrrekRekRlQArlgYaekgegvldT 222
                 +R +r ++ e  l Arl Y++++ g+l+T
  EPX73093.1  36 KRVDREGETEESLRARLKYQSRKRGILET 64 
                 7999************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       315  (0.0175693); expected 358.6 (0.02)
Passed bias filter:                      292  (0.0162865); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.43
# Mc/sec: 979.78
//
Query:       EPX73094.1  [L=256]
Description: F-actin capping protein alpha subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.7e-65  218.6   3.5    1.1e-64  218.5   3.5    1.0  1  F-actin_cap_A  F-actin capping protein alpha subunit
  ------ inclusion threshold ------
      0.061   13.8   3.3       0.29   11.6   3.3    1.9  1  SIMPL          Protein of unknown function (DUF541)


Domain annotation for each model (and alignments):
>> F-actin_cap_A  F-actin capping protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  218.5   3.5   1.2e-68   1.1e-64       2     262 ..       7     254 ..       6     256 .] 0.92

  Alignments for each domain:
  == domain 1  score: 218.5 bits;  conditional E-value: 1.2e-68
                    HHHHHT--TT-HHHHHHHHHCC-S-CCCCTTTHHHHHHHHHHHHT-EEEETTE..EEE--STTEEETTEEEEGGGTEEEEEETTTTEEEEEEE--S CS
  F-actin_cap_A   2 sslllqsPpgelneVlkDlrallsddskleealaealeeyneeqlvtvelpgssekvliseanklgeeryvdpkskksfkfdhlkqkasdvesvel 97 
                     ++++qsPpge+n+V++D+ral   d+   +++++ l+ ++e+   +v++ ++ e++++s+++kl+++ry+d++ kksf++++ + +a+dve++  
     EPX73094.1   7 YNFIRQSPPGEVNQVIEDIRALGLTDE---QRIQKQLQLHHEDSNSPVTMFEN-ERAVLSSESKLDDSRYYDQRLKKSFAVNFETMEAIDVEDY-- 96 
                    68********************95444...36778899999999999999885.99*************************************9.. PP

                    -GGGHHHHHHHHHHHHHHHHHH-TT.-EEEEEEEEETTEEEEEEEEEEEEEEGGGTEEEEEEEEEEEESSEEEEEEEEEEEEEE-SSEEEEEEEEE CS
  F-actin_cap_A  98 eseleelrkalekalekYvkehYps.gvasvypkeeeeekelaiiivgnkynpsnFwnGrwrseytvdsssktleGkikvqvHYyEdGNVqlktsk 192
                     +++ ++ + + k+++k + +hY s  ++++++++e+  + + i++v+ kynp+n++nGrwr+  ++++++k+l+G+  ++vHYyEdGNV l++++
     EPX73094.1  97 -NDKPTISEDIVKQIQKVTLDHYLSdVSIGILQNDEKVPE-YSIMLVSVKYNPQNYYNGRWRCVCKYNAEKKKLSGTSFIRVHYYEDGNVWLDAER 190
                    .678999****************99568888876655555.******************************************************* PP

                    EEEEEEE--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTS-SS-TTSS---CCHHTXXXXX CS
  F-actin_cap_A 193 evseslsvsseessakeivklikeaenkyqeeLnesyeeLsekafkaLRRqLPvtrqkidWdkvlnyklg 262
                    +++ s+       +  ++ +++ eaen+ q++ n ++++L++k+fk+LRRqLP+trqki+W++vl+ ++ 
     EPX73094.1 191 PIDVSID------DTGKLSDALVEAENANQRSFNVELSSLNDKKFKELRRQLPITRQKINWENVLGLRMR 254
                    *****99......77778888889******************************************9986 PP

>> SIMPL  Protein of unknown function (DUF541)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   3.3   3.3e-05      0.29      60     126 ..     141     235 ..      16     238 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 3.3e-05
       SIMPL  60 sslslkpeysy..........engknkitg........ye.......asqsltvkfrdldklgevldaavka..anein.gvsf.slsde..delrde 126
                  s+  +p+++y          + +k+k+ g        ye       a++ ++v++   d+ g++ da+v+a  an+ + +v++ sl+d+  +elr++
  EPX73094.1 141 VSVKYNPQNYYngrwrcvckyNAEKKKLSGtsfirvhyYEdgnvwldAERPIDVSI---DDTGKLSDALVEAenANQRSfNVELsSLNDKkfKELRRQ 235
                 33333555555677777777766666666655544443326777777******987...778888888899865664444788888887677777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       960  (0.0535445); expected 358.6 (0.02)
Passed bias filter:                      530  (0.029561); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.29s 00:00:00.78 Elapsed: 00:00:00.46
# Mc/sec: 1686.45
//
Query:       EPX73095.1  [L=267]
Description: S-adenosylmethionine transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.3e-49  163.5   4.8    1.6e-18   66.4   0.1    4.0  4  Mito_carr        Mitochondrial carrier protein
    0.00046   19.4   0.7     0.0066   15.6   0.7    2.3  1  Serine_protease  Gammaproteobacterial serine protease


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   3.1e-08   0.00028       4      37 ..       2      35 ..       1      39 [. 0.93
   2 !   27.3   0.2   2.7e-10   2.4e-06      56      95 ..      38      77 ..      35      79 .. 0.92
   3 !   49.0   0.0   4.8e-17   4.3e-13       5      95 ..      85     170 ..      83     172 .. 0.91
   4 !   66.4   0.1   1.7e-22   1.6e-18       8      96 ..     182     264 ..     176     265 .. 0.94

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 3.1e-08
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC CS
   Mito_carr  4 svlkellaGglagavatlvttPldvvKtrlqtqk 37
                s+++ l +G +ag++  l  +P+d++Ktrlq+++
  EPX73095.1  2 SFFEALGSGICAGLAVDLSLFPVDTLKTRLQAKG 35
                689999*************************976 PP

  == domain 2  score: 27.3 bits;  conditional E-value: 2.7e-10
                HHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr 56 ykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95
                + + G+ g yrGl+  l+++ap ++l f++yet+k+ l +
  EPX73095.1 38 LANGGFQGVYRGLGSILVGSAPGASLFFTTYETMKTKLHH 77
                5789*******************************99865 PP

  == domain 3  score: 49.0 bits;  conditional E-value: 4.8e-17
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHH.HGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   5 vlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGl.rglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                 ++ ++ +G+++ ++a lv  P++v+K r q+++++ ++      ++vl++i+k+e+  r+ly+G++++++r +p + ++f l e+lk++  +
  EPX73095.1  85 PVIHMTSGSMGEIAACLVRVPTEVIKQRAQASGGTLSS------RNVLQTIWKSEQSlRSLYSGYGITIMREIPFTLIQFPLWEYLKKTWRT 170
                 567899*****************************986......78*******87754*****************************98765 PP

  == domain 4  score: 66.4 bits;  conditional E-value: 1.7e-22
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCTT CS
   Mito_carr   8 ellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllkk 96 
                   l+G+lag +a+ +ttPldv+Ktr+++++k++++      ++++k+i++ eG r+l++G++p++l+ +   a+ +++y+t+ +l+ +k
  EPX73095.1 182 AALSGSLAGGIAAALTTPLDVIKTRIMLSQKRTSY------VSTVKNIIQLEGGRALFSGIVPRVLWLSGGGAIFLGFYDTVFNLIHEK 264
                 579*****************************885......89***************************************9998765 PP

>> Serine_protease  Gammaproteobacterial serine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.7   7.4e-07    0.0066      17     204 ..      17     210 ..       9     227 .. 0.64

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 7.4e-07
  Serine_protease  17 vsaltsPfkalLtnlqkdgsvlpsaysgGlfralYrGflayalagskrrav.aVtakktnr.eteeeeieeelkikqry...lgtvlfsaldll 105
                      v     P+ +l t+lq +g +l    +gG f+++YrG ++  l gs+ +a    t+  t + + ++ ++  + ++ +     +g +++  +  +
       EPX73095.1  17 VDLSLFPVDTLKTRLQAKGGFLA---NGG-FQGVYRGLGS-ILVGSAPGASlFFTTYETMKtKLHHSGLALSEPVIHMTsgsMGEIAACLV-RV 104
                      5555669***********99998...677.9*********.99999999862567777777444445554444433333122555544333.23 PP

  Serine_protease 106 vsqilesksklkkvpillkenF...kWslnNlwkLtsggfgsrslaGfvnFaalgv.vedeiakflkindelyn...k..llaGalsGviAtvl 190
                       +++ + +++    ++l ++n     W  + + + + +g+g   +   + F+ + + + +++ k+++  ++  +   +   l+G l+G iA+ l
       EPX73095.1 105 PTEVIKQRAQASG-GTLSSRNVlqtIWKSEQSLRSLYSGYGITIM-REIPFTLIQFpLWEYLKKTWRTSNNREKnmaHeaALSGSLAGGIAAAL 196
                      3555555555433.3333333211158555555555567777554.4678888877567888888877654433011322579999999***** PP

  Serine_protease 191 ttifnsykDkklla 204
                      tt++   k + +l 
       EPX73095.1 197 TTPLDVIKTRIMLS 210
                      *9999988877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (267 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       444  (0.0247643); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 1903.54
//
Query:       EPX73096.1  [L=412]
Description: hypothetical protein SOCG_00852 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-49  167.0   5.5    2.9e-49  167.0   5.5    1.7  2  Nod1      Gef2-related medial cortical node protein Nod1


Domain annotation for each model (and alignments):
>> Nod1  Gef2-related medial cortical node protein Nod1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  167.0   5.5   1.6e-53   2.9e-49       1     145 []      60     204 ..      60     204 .. 0.97
   2 ?   -2.4   0.1      0.27   4.9e+03      46      78 ..     335     367 ..     333     380 .. 0.72

  Alignments for each domain:
  == domain 1  score: 167.0 bits;  conditional E-value: 1.6e-53
        Nod1   1 mdklseeiakepkrealleslpskilfgsFlkYlkdkilekaGylLsekliqrLenldldlnskslkekavqqvkslleeLpesklklLevvfsivsel 99 
                 m+kls+ ia++p+r+++les+pskilfgsFl+Y+k ki+ekaG++L++++++ L++l +d  s  ++e++ qqvks++  Lp++k+k+L+v+fsiv+++
  EPX73096.1  60 MIKLSFLIADSPYRPISLESVPSKILFGSFLFYVKYKIYEKAGHVLDRQFCFTLRRLASDDLS-VKNEFFFQQVKSNFLALPKIKIKMLSVFFSIVQIV 157
                 789************************************************************.6667777**************************** PP

        Nod1 100 llkLplkdqcetv..lasiaavvaPrkfvneayelveflsleadelfk 145
                 l+kL+ +++ e+v  +asiaav++P+ +vne+y lve++sl+a+++f+
  EPX73096.1 158 LSKLR-GGYNERVqfFASIAAVILPKDQVNEMYYLVEYVSLNAQRIFQ 204
                 *****.*****************************************7 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.27
        Nod1  46 LsekliqrLenldldlnskslkekavqqvksll 78 
                 L++k+i++ ++l + lns++  ++ ++ + + +
  EPX73096.1 335 LHKKYIEASNKLRIALNSYQDVHEEIDTLYETF 367
                 566777777888888888777776666665544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (412 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1186  (0.0661498); expected 358.6 (0.02)
Passed bias filter:                      484  (0.0269954); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.45
# Mc/sec: 2766.39
//
Query:       EPX73097.1  [L=572]
Description: glucan 1,3-beta-glucosidase Exg2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.1e-09   36.7   0.4    3.1e-09   36.7   0.4    1.7  2  Cellulase  Cellulase (glycosyl hydrolase family 5)
  ------ inclusion threshold ------
        0.2   11.5   0.2        0.4   10.6   0.2    1.4  1  Tmemb_9    TMEM9


Domain annotation for each model (and alignments):
>> Cellulase  Cellulase (glycosyl hydrolase family 5)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.7   0.4   3.5e-13   3.1e-09      18     250 ..     219     453 ..     203     480 .. 0.71
   2 ?   -2.2   0.5      0.24   2.2e+03     267     280 ..     518     531 ..     489     532 .. 0.71

  Alignments for each domain:
  == domain 1  score: 36.7 bits;  conditional E-value: 3.5e-13
                 SCGGSHHHHHHHHHHHT-SEEEEEEECTGGTTSSTTTGCTHHHHHHHHHHHHHHHHTT-EEEEEEESS...............TTTCSSSSTTTTHHHH CS
   Cellulase  18 gnpyttkalidevkdagfntvRlpvswgelvenapdykvdenslerveevvkyakenglyvildiHse...............egwltkadgnssedta 101
                 ++++ tk +++ev++ag ++vR+ + +  l ++ + ++v       +  ++++a ++gl+v ld+H                  +wl+  +gn++ d++
  EPX73097.1 219 YSTFVTKRTFEEVREAGLDHVRITFPYWILHKDLNATNVSGIGWRYLLRAIEWARSQGLRVNLDLHAApgnqnswnhggylnqLNWLVGPEGNENADRT 317
                 34458999*****************8534443333335566777788899******************9999555555555544456666666666665 PP

                 HHHHHHHHHHHHHHHTTTTTTEEEESSSS--STTCTCCTCHHHTTHHHHHHHHHHHHHHHHTTSSEEEEECHHHHTBHHHHHCTSGSSSSTTEEEEEEE CS
   Cellulase 102 eeffkklwtqiAerykkndevvifelmNEPhgnntgaewtseeadevkayaeeaikaIRavgpnrliivegnswsgnldgavlndPndsqdnliysvHf 200
                  +  ++l t ++++   ++ v i+ l+NEP++          + + +++++++a+k++R++ p  +i +   ++ g  d     dP     n++++ H 
  EPX73097.1 318 LKIHEQLSTFFSQER-YKNVVTIYGLLNEPNSFL----I---DPQLINSWHKKAYKIVRSAIPGAIISISD-GFRGPGDWDKEYDPFH-FPNVLIDAHR 406
                 555555555555443.3666889*********43....3...5789*********************9998.7888777744558865.78******** PP

                 ETTTHHHTGCGSHSCTHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSTTS CS
   Cellulase 201 YgpsdfaqtefgkdltdktnlaqrledaakylvekgipviigEfGgsnad 250
                 Y+  +    +  ++  + ++  +++++  ++     +p i+gE+ + ++d
  EPX73097.1 407 YTIFNDFLIALPYE-DKFNIVCNSWKEEVEQKA--KLPTIVGEWSLADTD 453
                 *9444333333232.333333444444333322..259999999887766 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.24
                 HTTTEEEEEEESSS CS
   Cellulase 267 ekgiswiyWslnpk 280
                 +k  +w+yW+++ +
  EPX73097.1 518 DKTWGWFYWNWDTE 531
                 5678999**99875 PP

>> Tmemb_9  TMEM9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.2   4.5e-05       0.4      23      73 ..       9      59 ..       2      98 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 4.5e-05
     Tmemb_9 23 lsdevkgkelefcprCeCkyesRntttikvvviivivvislLviYmlflll 73
                  +++k+ +++f      ky sR t +i  +++ +++v  +Lv+++ ++ +
  EPX73097.1  9 SVESLKNPDNDFGVLRPSKYYSRKTIIIIATMVCFLSVTVCLVVFLPIIFC 59
                456788888888888899**************************9988777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (572 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       597  (0.033298); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 4035.53
//
Query:       EPX73098.1  [L=624]
Description: DNA repair protein Rhp41 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-30  105.7   0.0    4.1e-30  104.4   0.0    1.7  2  Rad4            Rad4 transglutaminase-like domain
    1.5e-24   86.2   0.0    2.7e-24   85.4   0.0    1.5  1  BHD_3           Rad4 beta-hairpin domain 3
    1.7e-18   66.2   0.1    4.5e-18   64.8   0.1    1.8  1  BHD_1           Rad4 beta-hairpin domain 1
    3.6e-11   43.8   2.1      2e-08   35.1   2.1    2.8  1  BHD_2           Rad4 beta-hairpin domain 2
     0.0097   16.3   0.0      0.025   15.0   0.0    1.7  1  Transglut_core  Transglutaminase-like superfamily


Domain annotation for each model (and alignments):
>> Rad4  Rad4 transglutaminase-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       2.3   8.2e+03      41      68 ..       5      32 ..       5      43 .. 0.74
   2 !  104.4   0.0   1.1e-33   4.1e-30      24     146 ..     275     396 ..     243     397 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 2.3
                EEEETTTTEEEEEESSSS-EESS--TTS CS
        Rad4 41 Evfspekkkwisvdplvgstiekkeile 68
                E fs+ ++ w+ +d+ +   i+ k+ +e
  EPX73098.1  5 ESFSEDEEDWLDLDLGQPAAIKSKTLFE 32
                6788889999999988877776655555 PP

  == domain 2  score: 104.4 bits;  conditional E-value: 1.1e-33
                 --TTHHHHHTTS-SEEEEEEETTTTEEEEEESSSS-EE.SS--TTS--TGGGS----EEEEE-TTS-EEE-HHHH-T.TCCCCHGGGSGGGSHHHHHHH CS
        Rad4  24 kkkrlkdkdlpypvyWvEvfspekkkwisvdplvgsti.ekkeileplaekakqvlsYVvAfdsdgsakDVTrRYlsdysnsktkklrvekskeekkWf 121
                   ++ +  d+p+pv+W Evf+ + +kw+++dp+   +   k +++ep +++++++++YV+A++s g++kDVTrRY+s+  + ++ + r+e    +++W+
  EPX73098.1 275 VLEKPQFIDSPKPVFWAEVFNTSMQKWVCIDPFGDASSvGKPSRFEPSSSDTLNQMTYVFAVESSGYMKDVTRRYTSR--YYRIMRNRLEMFPFGSDWL 371
                 556677789************************987768**************************************7..78999999**99******* PP

                 HHHHHHH--S---H..HHHHHHHHH CS
        Rad4 122 esvlrplekrnkertevdalEdael 146
                 +  l++l+++++ +++ da+Edael
  EPX73098.1 372 NLFLSKLKRPQDIYRDSDAIEDAEL 396
                 ************************9 PP

>> BHD_3  Rad4 beta-hairpin domain 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.4   0.0   7.6e-28   2.7e-24       1      75 [.     509     581 ..     509     582 .. 0.96

  Alignments for each domain:
  == domain 1  score: 85.4 bits;  conditional E-value: 7.6e-28
                 ----TTS-EE-SSGGGS-TTEEEEE-TTHHHHHHHCT---EEEEEEEEE-SS-EE..EEEEEEEEEGGGHHHHHH CS
       BHD_3   1 vPkNeygnieifkpsmlPegavhislkgaakaakklgidyapAvvGFefkgrrgkgiPvidGivVaeedeeavle 75 
                 vPkN+ygni++++++mlP ga+h ++  a+k ak+l+ dya+Av++F+f++r ++  P +dGivV ++++ea+l+
  EPX73098.1 509 VPKNAYGNIDLYTSNMLPYGAYHCTHAFAEKSAKLLEMDYARAVTSFDFHKRISR--PHYDGIVVSKKYKEALLQ 581
                 8*************************************************77667..***************986 PP

>> BHD_1  Rad4 beta-hairpin domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.8   0.1   1.2e-21   4.5e-18       2      51 .]     403     454 ..     402     454 .. 0.93

  Alignments for each domain:
  == domain 1  score: 64.8 bits;  conditional E-value: 1.2e-21
       BHD_1   2 epmPenlqdfKnhplYvLerhLkrnEvlhpdakpvgvfkk...kepVYrRsdV 51 
                 e++P+n+qd+K+hp++++erhL++nEv+ p++ ++g +++    e VY+R+ V
  EPX73098.1 403 EGIPKNIQDLKDHPIFAIERHLRKNEVIDPKK-SCGRLSTkkgVELVYPRKYV 454
                 9*******************************.99999656779*******87 PP

>> BHD_2  Rad4 beta-hairpin domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.1   2.1   5.5e-12     2e-08       2      63 ..     459     501 ..     458     502 .. 0.94

  Alignments for each domain:
  == domain 1  score: 35.1 bits;  conditional E-value: 5.5e-12
       BHD_2   2 SaerWyrlGReVkpgelPvKrvksraktarkkredekkeeeeeeeegevpLYgewQTelYvp 63 
                 Sa+rWyr GR+Vkpg +P+K+ k +a                   +g++pLYge+QT+lY+p
  EPX73098.1 459 SADRWYRKGRVVKPGIQPLKYAKDKA-------------------KGTIPLYGEEQTDLYIP 501
                 9********************99877...................589*************9 PP

>> Transglut_core  Transglutaminase-like superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   6.9e-06     0.025      43      80 ..     171     211 ..     152     306 .. 0.66

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 6.9e-06
  Transglut_core  43 aeavletgk...GncedfaslfvallRalGipaRvvtgyls 80 
                      e++l++ k   G+    ++lfv+llR+l +p+R+v+ ++ 
      EPX73098.1 171 KEDFLKAAKaleGDRDTGSQLFVSLLRSLDVPTRLVFSLQT 211
                     355555333355999999******************98877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (624 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       478  (0.0266607); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 4207.27
//
Query:       EPX73099.1  [L=239]
Description: proteasome-dependent catabolite inactivation protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.9e-34  116.5   1.3    1.1e-33  116.2   1.3    1.1  1  CLTH      CTLH/CRA C-terminal to LisH motif domain
     0.0033   17.3   0.0      0.007   16.3   0.0    1.6  1  LisH      LisH


Domain annotation for each model (and alignments):
>> CLTH  CTLH/CRA C-terminal to LisH motif domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.2   1.3   1.2e-37   1.1e-33       1     146 [.      72     224 ..      72     226 .. 0.91

  Alignments for each domain:
  == domain 1  score: 116.2 bits;  conditional E-value: 1.2e-37
        CLTH   1 sikerqkIiklilegdlseaiewinenkpellesnsnLeFkLkllqfielirg........ktkdieealeyarenlefend...ehlkelekamsLLa 88 
                 si er+++ +li++g++++a+ + ne++pe+l++n +L+F+L++l++ielir+          + ie+ l++a+enl++ +    ++l  le +msLL+
  EPX73099.1  72 SIRERMEVCELIRQGSINSAMYQLNELDPEILDKNTELLFELLRLKLIELIREamsrddasD-DTIEKCLAFATENLAPIAPlnpAFLSSLEITMSLLC 169
                 689*************************************************7665555422.66************85444455************** PP

        CLTH  89 fsdpeskelssplknlldpsrrekvakefnsailkllglskespLeillsaglsalkt 146
                 fs+ +       lkn ldps+re va++ n a+lk++gl++es L  l++ ++++ k+
  EPX73099.1 170 FSPSS---YTPALKNALDPSQRERVANLANLAMLKSQGLPNESRLLALVNFESWCRKQ 224
                 **954...588********************************************976 PP

>> LisH  LisH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   7.8e-07     0.007       2      27 .]      37      62 ..      36      62 .. 0.95

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 7.8e-07
                HHHHHHHHHHHHCT-HHHHHHHHHHT CS
        LisH  2 eLNrLIydYLvkeGyeetAeaFekEa 27
                ++N L++dYL+  G e+ A++F+ Ea
  EPX73099.1 37 DINLLVLDYLIIQGNEQGARTFASEA 62
                8**********************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       386  (0.0215294); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1805.08
//
Query:       EPX73100.1  [L=259]
Description: hypothetical protein SOCG_00856 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      0.002   18.3   0.0     0.0029   17.7   0.0    1.3  1  Spond_N   Spondin_N


Domain annotation for each model (and alignments):
>> Spond_N  Spondin_N
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   1.6e-07    0.0029      71     125 ..      72     129 ..      41     151 .. 0.85

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 1.6e-07
     Spond_N  71 ekkkvkkvfkapgislkgtgktsakvrvdknhslvSlltkiaPSP...DWfvGvdsle 125
                  +++vk++f+ ++    +++ +s++++ ++nh+ + + t+i+PSP   DW   v + +
  EPX73100.1  72 FSNRVKNLFSKKNPPSGHSSPSSNTFFQNNNHHRLPVQTEIVPSPtdlDWNYQVHTSN 129
                 45689****99999999999*************************9889998887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       356  (0.0198561); expected 358.6 (0.02)
Passed bias filter:                      251  (0.0139997); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1915.96
//
Query:       EPX73101.1  [L=152]
Description: ribonuclease H2 complex subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.9e-17   63.7   0.0    2.3e-17   63.5   0.0    1.1  1  RNase_H2_suC  Ribonuclease H2 non-catalytic subunit (Ylr154p-


Domain annotation for each model (and alignments):
>> RNase_H2_suC  Ribonuclease H2 non-catalytic subunit (Ylr154p-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.5   0.0   1.3e-21   2.3e-17       1     140 [.      19     147 ..      19     148 .. 0.83

  Alignments for each domain:
  == domain 1  score: 63.5 bits;  conditional E-value: 1.3e-21
                   -EEEESSEESSEEE--HHHHTCC........C-EE-SSS.EEEEETTEEEEEEEEE--TTEEEEEEECCTTS-EEESEEEEEEESS---S-SGGGTT CS
  RNase_H2_suC   1 alnlLPfsiktdgpantahyfqprksakpahkegadqqellraaFRGRqlvGqelsvppayrgiilsttnppnkggldsddeqeeeddeegegeeta 97 
                   +++l+P+ i +dgpa ++++f  ++      ++++d++++ +++FRGR+l G++l++p +y g +++  +p +  ++  ++ q++ +de+  +ee+ 
    EPX73101.1  19 NVSLMPCFIDFDGPAPVSEFFHDKI------SKKDDSTNTDLVYFRGRELNGKTLKLPDGYMGECVHLPLPGSVDQSLTGNGQDNIEDEASVSEEH- 108
                   589********************66......8888888899*****************************99844444444444444444444444. PP

                   --EE.EEEEEEESEEEEECECS--..-TTSHHHHHTTHHHHHHH CS
  RNase_H2_suC  98 vtksileptaefesftlWkhDeap.eggDefvrgvgewlglvea 140
                         ++  +f++f +W++D     ++ ++ +g+ ew +++  
    EPX73101.1 109 -----CQTSSTFSQFRIWDRDVSTsIEQNQWYKGIVEWTQFASK 147
                   .....88899***********99956789999*******99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       354  (0.0197445); expected 358.6 (0.02)
Passed bias filter:                      271  (0.0151152); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1163.71
//
Query:       EPX73102.1  [L=507]
Description: hypothetical protein SOCG_00858 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   5.6e-178  592.1   0.0   6.5e-178  591.9   0.0    1.0  1  Glyco_hydro_125  Metal-independent alpha-mannosidase (GH125)
  ------ inclusion threshold ------
       0.15   12.7   0.2       0.98   10.1   0.0    2.1  2  PIG-L            GlcNAc-PI de-N-acetylase


Domain annotation for each model (and alignments):
>> Glyco_hydro_125  Metal-independent alpha-mannosidase (GH125)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  591.9   0.0  7.3e-182  6.5e-178       1     416 []      76     493 ..      76     493 .. 0.99

  Alignments for each domain:
  == domain 1  score: 591.9 bits;  conditional E-value: 7.3e-182
                      SHHHHHHHHHHHHHHHHHTEEEETT.....EEEE--BSS-SEEHHHHHHHHGGGGGGTTTSGGGHHHHHHHHHHHHHHHHH-TT-SEE-..SS. CS
  Glyco_hydro_125   1 dpdlarlfenafpntldttvkwkeka...eltfvitGDidamWlRDsanqlasYlpllkedeklaslirgvinlqaryilispYanaFqppees 91 
                      d+dlarlfen++pntldtt++w+e++   ++t vitGDi+a+W+RDsanqla+Ylpl+k+d+ l+sli g+i++qa+++++ pY+naFqpp++s
       EPX73102.1  76 DEDLARLFENCMPNTLDTTIRWHEDHpdhPQTLVITGDIPAEWIRDSANQLAPYLPLVKSDRPLSSLILGAIQTQAEMLIQFPYCNAFQPPKQS 169
                      89***********************9999***************************************************************** PP

                      ..SS---SS..--BS-TT.....EEE----HHHHHHHHHHHHHHHHHH---TT--HHHHHHHHHHHHHHHHGG.......GHHH.H-----B-S CS
  Glyco_hydro_125  92 glkkteneaaqkdkvepeydeelvfeckyelDSlaaflqlsseyyeatgdleffeekwvkaveaildvleeqqegtydedgkkvlksaYtfqre 185
                      ++  ++n+  q+d+v+p+yd+++vfeckyelDSlaafl+ls++y+  ++d+++f+ kwv++v+ i++vleeq+++t+d d+   ++  Ytf r+
       EPX73102.1 170 HIGGNDNG--QSDRVTPAYDPQVVFECKYELDSLAAFLKLSYNYWFYSKDSSIFSPKWVSTVQVIFRVLEEQSTSTFDPDTGFPKNPVYTFLRQ 261
                      **999997..57*********************************************************************9999999****** PP

                      SSSGGGS-HHHHT-S----.SSS---SB-TTS-B-SSSEEHHHHHHHHHHHHHHHHHHHHTS--.HHHHHHHHHHHHHHHHHHHSEEEETTTEE CS
  Glyco_hydro_125 186 tnratetlsneglGnpvkentGlvrsaFRpSDDatifqflipaNmmlaveLeklaeileklaekelakearklakeiregiekhavvehkkfgk 279
                      t+++tetl  +g+G p+++n +l+r+aFRpSDD++i+q+lipaN+m++veL++l+e+l+ + +++lak a ++a++i++gi++h++v+h+kfgk
       EPX73102.1 262 TDSGTETLGLSGRGFPLNKNSSLIRTAFRPSDDTSILQYLIPANAMMVVELSHLHEMLQVAGHADLAKIAMSWANKISNGIREHGIVDHPKFGK 355
                      ***********************************************************999999***************************** PP

                      EE-SEE-SSS-EE----SSSS-STTHHHHTSS-TT-HHHHHHHHHHTST.TSTTEEE-SS-EEE--TTS-TTEEEHHHHHHHHHT---HHHHHH CS
  Glyco_hydro_125 280 iyAyEvDGyGsallmDDanvPsLLslpllgyvkkddevYqnTrkfvlsk.anpYflkGkalsgiGgphvglgkaWpmalivqaltsdddeeiae 372
                      +yAyEvDGyGsa++mDDan+PsLLslp+lgyv++dd++Y nTrk+vls   npY+lkG++++giGgph+gl+++Wpm+livqaltsddd+ei +
       EPX73102.1 356 VYAYEVDGYGSAIFMDDANIPSLLSLPYLGYVERDDPIYLNTRKMVLSPeGNPYYLKGTVIAGIGGPHIGLRNVWPMSLIVQALTSDDDNEILS 449
                      ************************************************989******************************************* PP

                      HHHHHHHTSTTSSS--SEEETTEEEEES-S-BHHHHHHHHHHHH CS
  Glyco_hydro_125 373 llklllkstaglglvhEsvnvdnekkftRswFawanslfgelil 416
                      ll+++++st++lgl+hEsv+v++ +++tRswF+wansl++eli+
       EPX73102.1 450 LLQTIKRSTNNLGLMHESVDVTSFARYTRSWFSWANSLYSELII 493
                      ******************************************96 PP

>> PIG-L  GlcNAc-PI de-N-acetylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00011      0.98      86     123 ..      70     107 ..      19     113 .. 0.78
   2 ?   -0.4   0.0      0.18   1.6e+03      60     104 ..     455     500 ..     442     503 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00011
                 S-CHHHHHHHHHHHHHH--SEEEEE-TTTTH-HHHHHH CS
       PIG-L  86 ydedellddlaklieryrPdvvltldpegddhpDHtav 123
                 ++ + + +dla+l+e+  P+++ t+ +  +dhpDH  +
  EPX73102.1  70 VKSRLADEDLARLFENCMPNTLDTTIRWHEDHPDHPQT 107
                 677788899************9999999989****665 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.18
                 HHHHHHCTE..EEEEECCCBTT-STT..S-CHHHHHHHHHHHHHH-- CS
       PIG-L  60 raaakhlgvadedvffldfpDgsles..ydedellddlaklieryrP 104
                 +++ + lg+ +e+v +++f+  + +   + ++ +++ + +l+er  P
  EPX73102.1 455 KRSTNNLGLMHESVDVTSFARYTRSWfsWANSLYSELIIDLLERK-P 500
                 567788999999998888766666557789999999999999875.5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (507 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       477  (0.0266049); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.26s 00:00:00.86 Elapsed: 00:00:00.46
# Mc/sec: 3306.80
//
Query:       EPX73103.1  [L=1254]
Description: PPR repeat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.5e-35  118.6  18.0    6.5e-12   45.5   0.0   12.0 13  PPR_2     PPR repeat family
    1.3e-22   78.4  16.2    0.00014   21.8   0.0   12.0 16  PPR       PPR repeat
    3.2e-18   65.6   7.1    0.00012   22.1   0.0    7.4  7  PPR_3     Pentatricopeptide repeat domain
    5.6e-18   64.3   6.8      9e-07   28.5   0.1    7.9 12  PPR_1     PPR repeat
    5.4e-17   61.9   7.6    1.5e-09   37.5   0.1    4.9  4  PPR_long  Pentacotripeptide-repeat region of PRORP
  ------ inclusion threshold ------
      0.018   15.4   1.7       0.53   10.7   0.1    3.5  3  RPM2      Mitochondrial ribonuclease P subunit (RPM2)
       0.09   12.7   0.6        9.6    6.2   0.1    2.8  2  TPR_10    Tetratricopeptide repeat
       0.38   10.6   7.5         42    4.0   0.1    5.9  6  ATP13     Mitochondrial ATPase expression
        1.6    9.1   4.3         16    5.8   0.1    3.6  4  Imm41     Immunity protein 41


Domain annotation for each model (and alignments):
>> PPR_2  PPR repeat family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   1.7   1.5e-08   3.1e-05       2      50 .]     210     265 ..     209     265 .. 0.95
   2 ?   -0.2   0.0      0.58   1.1e+03       8      26 ..     367     385 ..     367     389 .. 0.92
   3 ?    5.0   0.0     0.015        29       2      27 ..     401     426 ..     400     429 .. 0.93
   4 ?   -1.2   0.0       1.2   2.4e+03       7      23 ..     444     460 ..     441     464 .. 0.87
   5 ?   -0.1   0.0      0.56   1.1e+03       7      27 ..     551     571 ..     547     582 .. 0.86
   6 ?    2.3   0.0     0.097   1.9e+02       5      27 ..     804     826 ..     803     829 .. 0.90
   7 !    7.0   0.0    0.0034       6.9       5      39 ..     885     922 ..     881     922 .. 0.76
   8 !   45.5   0.0   3.3e-15   6.5e-12       1      50 []     919     968 ..     919     968 .. 0.98
   9 !   18.7   0.3   7.6e-07    0.0015       4      46 ..     957    1000 ..     957    1001 .. 0.94
  10 !   14.3   0.2   1.7e-05     0.034       2      48 ..     991    1038 ..     990    1039 .. 0.92
  11 !   10.9   0.0   0.00021      0.41      17      50 .]    1119    1152 ..    1107    1152 .. 0.83
  12 !    7.3   0.0    0.0027       5.4       2      26 ..    1139    1163 ..    1138    1170 .. 0.86
  13 !    8.3   0.0    0.0014       2.7       5      33 ..    1178    1206 ..    1175    1210 .. 0.93

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 1.5e-08
       PPR_2   2 dvvtyNtlIsglc.......kkgkveeAfklfneMkkrglePnsyTysilikglck 50 
                 + ++yNt++ +++         +++++ ++++ +M +  + P+++T+ ++i++lc+
  EPX73103.1 210 NLHAYNTILECMAnndyyitSSKNMQKVVRVYVDMLNCFFVPDAKTFETVITALCR 265
                 7899********999999988999*******************************7 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.58
       PPR_2   8 tlIsglckkgkveeAfklf 26 
                 +lI ++ k++++e +f+l+
  EPX73103.1 367 ALIRAFGKAKRLEVCFQLL 385
                 69**************997 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.015
       PPR_2   2 dvvtyNtlIsglckkgkveeAfklfn 27 
                 +v ++ +l+  +++ +++ +A++l++
  EPX73103.1 401 NVDSWEALMESYFETNHSGQAIQLME 426
                 7889********************87 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 1.2
       PPR_2   7 NtlIsglckkgkveeAf 23 
                 N+ ++ l + g+++eA 
  EPX73103.1 444 NCFLNRLSQLGDYKEAA 460
                 99*************95 PP

  == domain 5  score: -0.1 bits;  conditional E-value: 0.56
       PPR_2   7 NtlIsglckkgkveeAfklfn 27 
                  t+ +++  +g+v+ A++l++
  EPX73103.1 551 STIYKAFIDNGHVSLALRLLK 571
                 56668999**********987 PP

  == domain 6  score: 2.3 bits;  conditional E-value: 0.097
       PPR_2   5 tyNtlIsglckkgkveeAfklfn 27 
                 +y +lIs+l k++++    ++f+
  EPX73103.1 804 AYPSLISALSKHKQFGAVHRVFE 826
                 5779*****************98 PP

  == domain 7  score: 7.0 bits;  conditional E-value: 0.0034
       PPR_2   5 tyNtlIsglckkgkvee...AfklfneMkkrglePnsy 39 
                 t+ +lI+   k+g+ ++   A+k+f+e k+++++P+++
  EPX73103.1 885 TFAHLINNSTKRGDTDDattALKIFEETKRHNVKPSVF 922
                 7777777777777766522279*************986 PP

  == domain 8  score: 45.5 bits;  conditional E-value: 3.3e-15
       PPR_2   1 pdvvtyNtlIsglckkgkveeAfklfneMkkrglePnsyTysilikglck 50 
                 p+v+ yN+++s l ++++  e++klf+eMk+ gl P+s+Ty ++i++ c+
  EPX73103.1 919 PSVFLYNAVLSKLGRARRTTECWKLFQEMKEFGLLPTSVTYGTVINAACR 968
                 89**********************************************97 PP

  == domain 9  score: 18.7 bits;  conditional E-value: 7.6e-07
       PPR_2    4 vtyNtlIsglckkgkveeAfklfneMkk.rglePnsyTysilik 46  
                  vty t+I++ c+ g+   A klf eM++  + +P +  y+++i+
  EPX73103.1  957 VTYGTVINAACRIGDEALAEKLFCEMENqSNYQPRVAPYNTMIQ 1000
                  8***************************5589**********96 PP

  == domain 10  score: 14.3 bits;  conditional E-value: 1.7e-05
       PPR_2    2 dvvtyNtlIsglck.kgkveeAfklfneMkkrglePnsyTysilikgl 48  
                   v  yNt+I+  ++   + e+A+  +n   +  ++P+++Ty  l++++
  EPX73103.1  991 RVAPYNTMIQFEVQtMYNREKALYYYNRLCSTEIQPSPHTYKLLMDAY 1038
                  5778********9868889**************************996 PP

  == domain 11  score: 10.9 bits;  conditional E-value: 0.00021
       PPR_2   17 gkveeAfklfneMkkrglePnsyTysilikglck 50  
                   ++ e +++ ++Mkk g++ n+y  + likg+ k
  EPX73103.1 1119 DRIIERVQIVSDMKKYGVSLNAYIVNALIKGFTK 1152
                  55556678999********************965 PP

  == domain 12  score: 7.3 bits;  conditional E-value: 0.0027
       PPR_2    2 dvvtyNtlIsglckkgkveeAfklf 26  
                  +  + N+lI+g+ k g++++A   f
  EPX73103.1 1139 NAYIVNALIKGFTKVGMISKARYYF 1163
                  56678****************8666 PP

  == domain 13  score: 8.3 bits;  conditional E-value: 0.0014
       PPR_2    5 tyNtlIsglckkgkveeAfklfneMkkrg 33  
                  ty  +  +++  ++ eeA+++ ++ k++ 
  EPX73103.1 1178 TYENMVRAYLSVNNAEEAVEIVEQLKRKR 1206
                  999************************96 PP

>> PPR  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.2       3.7   7.3e+03       2      15 ..     213     226 ..     212     228 .. 0.83
   2 ?   -3.5   0.0       8.5   1.7e+04      14      27 ..     232     245 ..     230     246 .. 0.84
   3 ?   -1.7   0.0       2.3   4.7e+03       2      13 ..     255     266 ..     255     271 .. 0.78
   4 ?    4.7   0.0      0.02        41       5      24 ..     367     386 ..     367     389 .. 0.92
   5 ?   -3.0   0.0       5.8   1.2e+04       2      24 ..     404     426 ..     404     427 .. 0.84
   6 ?    1.8   0.0      0.17   3.5e+02       3      23 ..     443     463 ..     441     466 .. 0.85
   7 ?   -2.3   0.0       3.7   7.4e+03       4      19 ..     481     496 ..     479     502 .. 0.80
   8 ?   -1.5   0.0       1.9   3.9e+03       9      25 ..     556     572 ..     550     572 .. 0.86
   9 ?    3.4   0.0     0.053   1.1e+02       5      24 ..     807     826 ..     804     829 .. 0.91
  10 ?   -0.8   0.0       1.2   2.5e+03      18      30 ..     904     916 ..     885     917 .. 0.72
  11 !   21.8   0.0   7.2e-08   0.00014       2      31 .]     923     952 ..     922     952 .. 0.95
  12 !   19.0   0.0   5.8e-07    0.0011       1      28 [.     957     984 ..     957     986 .. 0.96
  13 ?   -2.7   0.0         5     1e+04       3       8 ..     995    1000 ..     994    1000 .. 0.88
  14 ?   -0.4   0.0      0.89   1.8e+03       2      12 ..    1030    1040 ..    1029    1045 .. 0.85
  15 !   12.1   0.1   9.4e-05      0.19       3      30 ..    1143    1170 ..    1141    1171 .. 0.87
  16 !   11.7   0.0   0.00012      0.25       2      30 ..    1178    1206 ..    1177    1207 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 3.7
         PPR   2 tynslIsgycknGk 15 
                 +yn+++ + + n +
  EPX73103.1 213 AYNTILECMANNDY 226
                 6*****99998865 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 8.5
         PPR  14 GkleeAlelfkeMk 27 
                  +++++++++ +M+
  EPX73103.1 232 KNMQKVVRVYVDML 245
                 689999****9996 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 2.3
         PPR   2 tynslIsgyckn 13 
                 t+ ++I ++c+ 
  EPX73103.1 255 TFETVITALCRR 266
                 6779******97 PP

  == domain 4  score: 4.7 bits;  conditional E-value: 0.02
         PPR   5 slIsgycknGkleeAlelfk 24 
                 +lI++++k+ +le +++l++
  EPX73103.1 367 ALIRAFGKAKRLEVCFQLLQ 386
                 69**************9985 PP

  == domain 5  score: -3.0 bits;  conditional E-value: 5.8
         PPR   2 tynslIsgycknGkleeAlelfk 24 
                 ++ +l+ +y   +    A++l++
  EPX73103.1 404 SWEALMESYFETNHSGQAIQLME 426
                 6889999**99999999988875 PP

  == domain 6  score: 1.8 bits;  conditional E-value: 0.17
         PPR   3 ynslIsgycknGkleeAlelf 23 
                  n+ ++ +++ G+++eA  ++
  EPX73103.1 443 VNCFLNRLSQLGDYKEAAYWL 463
                 59999************7665 PP

  == domain 7  score: -2.3 bits;  conditional E-value: 3.7
         PPR   4 nslIsgycknGkleeA 19 
                 +s++ + ck+ ++e  
  EPX73103.1 481 SSILEAACKAKDVEFS 496
                 6889999****99965 PP

  == domain 8  score: -1.5 bits;  conditional E-value: 1.9
         PPR   9 gycknGkleeAlelfke 25 
                 ++  nG ++ Al+l+k+
  EPX73103.1 556 AFIDNGHVSLALRLLKK 572
                 78889*********986 PP

  == domain 9  score: 3.4 bits;  conditional E-value: 0.053
         PPR   5 slIsgycknGkleeAlelfk 24 
                 slIs+++k+ ++  + ++f+
  EPX73103.1 807 SLISALSKHKQFGAVHRVFE 826
                 8***********99999997 PP

  == domain 10  score: -0.8 bits;  conditional E-value: 1.2
         PPR  18 eAlelfkeMkekG 30 
                  Al++f+e k+++
  EPX73103.1 904 TALKIFEETKRHN 916
                 4788888877765 PP

  == domain 11  score: 21.8 bits;  conditional E-value: 7.2e-08
         PPR   2 tynslIsgycknGkleeAlelfkeMkekGi 31 
                  yn+++s ++++++  e+ +lf+eMke G+
  EPX73103.1 923 LYNAVLSKLGRARRTTECWKLFQEMKEFGL 952
                 6**************************996 PP

  == domain 12  score: 19.0 bits;  conditional E-value: 5.8e-07
         PPR   1 vtynslIsgycknGkleeAlelfkeMke 28 
                 vty ++I++ c+ G+   A++lf+eM+ 
  EPX73103.1 957 VTYGTVINAACRIGDEALAEKLFCEMEN 984
                 8*************************85 PP

  == domain 13  score: -2.7 bits;  conditional E-value: 5
         PPR    3 ynslIs 8   
                  yn++I+
  EPX73103.1  995 YNTMIQ 1000
                  9***95 PP

  == domain 14  score: -0.4 bits;  conditional E-value: 0.89
         PPR    2 tynslIsgyck 12  
                  ty  l+++y+ 
  EPX73103.1 1030 TYKLLMDAYGM 1040
                  9********96 PP

  == domain 15  score: 12.1 bits;  conditional E-value: 9.4e-05
         PPR    3 ynslIsgycknGkleeAlelfkeMkekG 30  
                   n+lI+g+ k G++++A  +f+ +  +G
  EPX73103.1 1143 VNALIKGFTKVGMISKARYYFDLLDCDG 1170
                  6********************9876665 PP

  == domain 16  score: 11.7 bits;  conditional E-value: 0.00012
         PPR    2 tynslIsgycknGkleeAlelfkeMkekG 30  
                  ty  ++++y + ++ eeA+e+ +++k+k 
  EPX73103.1 1178 TYENMVRAYLSVNNAEEAVEIVEQLKRKR 1206
                  999***********************985 PP

>> PPR_3  Pentatricopeptide repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.2      0.89   1.8e+03      14      28 ..     210     224 ..     208     237 .. 0.77
   2 !   22.1   0.0     6e-08   0.00012      15      61 ..     883     932 ..     871     934 .. 0.82
   3 !   21.0   0.0   1.3e-07   0.00026       1      58 [.     942    1000 ..     942    1005 .. 0.92
   4 !    7.9   0.1    0.0016       3.1       9      61 ..     986    1039 ..     984    1041 .. 0.90
   5 ?   -2.1   0.0       2.1   4.2e+03      35      47 ..    1050    1062 ..    1045    1077 .. 0.71
   6 !    7.8   0.0    0.0018       3.5       2      38 ..    1127    1163 ..    1126    1172 .. 0.86
   7 !    7.0   0.0     0.003       6.1      17      45 ..    1178    1206 ..    1176    1213 .. 0.94

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.89
       PPR_3  14 dvvtYthLLtayana 28 
                 ++  Y+++L+ +an+
  EPX73103.1 210 NLHAYNTILECMANN 224
                 777788888876654 PP

  == domain 2  score: 22.1 bits;  conditional E-value: 6e-08
       PPR_3  15 vvtYthLLtayanagnkkl...alevlermkkkgikPtvvtyNailgvig 61 
                   t+ hL++ + + g+ ++   al+++e+ k   +kP+v  yNa+l+  g
  EPX73103.1 883 ASTFAHLINNSTKRGDTDDattALKIFEETKRHNVKPSVFLYNAVLSKLG 932
                 5699*********999886222689********************98765 PP

  == domain 3  score: 21.0 bits;  conditional E-value: 1.3e-07
       PPR_3    1 silremerkgikldvvtYthLLtayanagnkklalevlermk.kkgikPtvvtyNailg 58  
                  ++++em++ g+ +  vtY + ++a+ + g++ la++ + +m+ +   +P v  yN +++
  EPX73103.1  942 KLFQEMKEFGLLPTSVTYGTVINAACRIGDEALAEKLFCEMEnQSNYQPRVAPYNTMIQ 1000
                  699**************************************935689********9996 PP

  == domain 4  score: 7.9 bits;  conditional E-value: 0.0016
       PPR_3    9 kgikldvvtYthLLtayana.gnkklalevlermkkkgikPtvvtyNailgvig 61  
                   + ++ v  Y+++++  +++  n++ al+  +r+    i+P+  ty  ++ ++g
  EPX73103.1  986 SNYQPRVAPYNTMIQFEVQTmYNREKALYYYNRLCSTEIQPSPHTYKLLMDAYG 1039
                  577899999******98886369******************************7 PP

  == domain 5  score: -2.1 bits;  conditional E-value: 2.1
       PPR_3   35 levlermkkkgik 47  
                  + +le m++ g+k
  EPX73103.1 1050 EAILELMEQTGVK 1062
                  5677778777775 PP

  == domain 6  score: 7.8 bits;  conditional E-value: 0.0018
       PPR_3    2 ilremerkgikldvvtYthLLtayanagnkklalevl 38  
                  i+ +m++ g+ l+ +  ++L++++ ++g    a + +
  EPX73103.1 1127 IVSDMKKYGVSLNAYIVNALIKGFTKVGMISKARYYF 1163
                  899*********************9999777776665 PP

  == domain 7  score: 7.0 bits;  conditional E-value: 0.003
       PPR_3   17 tYthLLtayanagnkklalevlermkkkg 45  
                  tY  + +ay  + n + a e++e++k k+
  EPX73103.1 1178 TYENMVRAYLSVNNAEEAVEIVEQLKRKR 1206
                  8999**********************987 PP

>> PPR_1  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       5.6   1.1e+04       8      15 ..     212     219 ..     209     221 .. 0.73
   2 !    8.8   0.0   0.00064       1.3       4      20 ..     250     266 ..     249     269 .. 0.88
   3 ?   -1.9   0.1       1.5   2.9e+03      13      30 ..     368     385 ..     367     386 .. 0.86
   4 ?   -2.7   0.0       2.6   5.2e+03      11      24 ..     481     494 ..     475     501 .. 0.82
   5 ?   -3.5   0.0       4.6   9.2e+03      20      31 ..     560     571 ..     559     572 .. 0.88
   6 ?    0.4   0.0      0.28   5.5e+02       7      27 ..     883     903 ..     878     907 .. 0.85
   7 !   12.3   0.0   5.2e-05       0.1       2      34 .]     916     948 ..     915     948 .. 0.96
   8 !   28.5   0.1   4.5e-10     9e-07       2      34 .]     951     983 ..     950     983 .. 0.97
   9 ?   -2.5   0.0       2.2   4.4e+03      10      14 ..     995     999 ..     988    1000 .. 0.84
  10 ?   -3.4   0.0       4.2   8.4e+03       3      17 ..    1024    1038 ..    1023    1038 .. 0.86
  11 !    8.7   0.0    0.0007       1.4       2      27 ..    1135    1160 ..    1134    1165 .. 0.90
  12 ?   -2.2   0.0       1.8   3.6e+03      20      32 ..    1189    1201 ..    1178    1203 .. 0.73

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 5.6
                 HHHHHHHH CS
       PPR_1   8 vTYNtLId 15 
                   YNt++ 
  EPX73103.1 212 HAYNTILE 219
                 56***986 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00064
                 ---HHHHHHHHHHHHHT CS
       PPR_1   4 kPdvvTYNtLIdGlCka 20 
                 +Pd+ T+ t+I +lC+ 
  EPX73103.1 250 VPDAKTFETVITALCRR 266
                 7**************97 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 1.5
                 HHHHHHHTS-HHHHHHHH CS
       PPR_1  13 LIdGlCkaGrvdeAfelf 30 
                 LI ++ ka r++  f+l+
  EPX73103.1 368 LIRAFGKAKRLEVCFQLL 385
                 9*********99888776 PP

  == domain 4  score: -2.7 bits;  conditional E-value: 2.6
                 HHHHHHHHHTS-HH CS
       PPR_1  11 NtLIdGlCkaGrvd 24 
                 ++++ + Cka +v+
  EPX73103.1 481 SSILEAACKAKDVE 494
                 7889999***9986 PP

  == domain 5  score: -3.5 bits;  conditional E-value: 4.6
                 TS-HHHHHHHHH CS
       PPR_1  20 aGrvdeAfelfd 31 
                 +G+v  A++l++
  EPX73103.1 560 NGHVSLALRLLK 571
                 899*******97 PP

  == domain 6  score: 0.4 bits;  conditional E-value: 0.28
                 HHHHHHHHHHHHHTS-HHHHH CS
       PPR_1   7 vvTYNtLIdGlCkaGrvdeAf 27 
                 + T+  LI+   k G+ d+A 
  EPX73103.1 883 ASTFAHLINNSTKRGDTDDAT 903
                 569999***999*******96 PP

  == domain 7  score: 12.3 bits;  conditional E-value: 5.2e-05
                 S----HHHHHHHHHHHHHTS-HHHHHHHHHHHH CS
       PPR_1   2 GlkPdvvTYNtLIdGlCkaGrvdeAfelfdeMe 34 
                 ++kP v+ YN +++ l +a r  e  +lf eM+
  EPX73103.1 916 NVKPSVFLYNAVLSKLGRARRTTECWKLFQEMK 948
                 69******************************7 PP

  == domain 8  score: 28.5 bits;  conditional E-value: 4.5e-10
                 S----HHHHHHHHHHHHHTS-HHHHHHHHHHHH CS
       PPR_1   2 GlkPdvvTYNtLIdGlCkaGrvdeAfelfdeMe 34 
                 Gl P+ vTY t+I++ C+ G+   A++lf eMe
  EPX73103.1 951 GLLPTSVTYGTVINAACRIGDEALAEKLFCEME 983
                 99******************************7 PP

  == domain 9  score: -2.5 bits;  conditional E-value: 2.2
                 HHHHH CS
       PPR_1  10 YNtLI 14 
                 YNt+I
  EPX73103.1 995 YNTMI 999
                 ****9 PP

  == domain 10  score: -3.4 bits;  conditional E-value: 4.2
                  ----HHHHHHHHHHH CS
       PPR_1    3 lkPdvvTYNtLIdGl 17  
                  ++P   TY  L d++
  EPX73103.1 1024 IQPSPHTYKLLMDAY 1038
                  689999**9999987 PP

  == domain 11  score: 8.7 bits;  conditional E-value: 0.0007
                  S----HHHHHHHHHHHHHTS-HHHHH CS
       PPR_1    2 GlkPdvvTYNtLIdGlCkaGrvdeAf 27  
                  G++ +++  N LI+G+ k G++ +A 
  EPX73103.1 1135 GVSLNAYIVNALIKGFTKVGMISKAR 1160
                  8999******************9995 PP

  == domain 12  score: -2.2 bits;  conditional E-value: 1.8
                  TS-HHHHHHHHHH CS
       PPR_1   20 aGrvdeAfelfde 32  
                   ++ +eA+e++++
  EPX73103.1 1189 VNNAEEAVEIVEQ 1201
                  57789****9998 PP

>> PPR_long  Pentacotripeptide-repeat region of PRORP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.2   6.1e-07    0.0012      27     102 ..     192     269 ..     172     288 .. 0.79
   2 ?   -1.0   0.0      0.47   9.4e+02      13     145 ..     291     422 ..     279     430 .. 0.54
   3 !   37.5   0.1   7.7e-13   1.5e-09      14     168 ..     886    1036 ..     872    1063 .. 0.87
   4 !    6.5   0.1    0.0023       4.7      27     118 ..    1121    1204 ..    1099    1252 .. 0.62

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 6.1e-07
                 HHHHHHHHHHHHHSSS---HHHHHHHHHHHHHC.HCSTTTHHHHHHHHHHHHHHHHHTT----....HHHHHHHHHHHHH CS
    PPR_long  27 aaaAlelydkavaegvrlaqyhynvllylcskaeaaseskknkalargfevfeamkakgvspn....Eatvtalarlaaa 102
                  ++ +ely+ a+++   l+ + yn++l  +++ +   +s k   ++++ +v+ +m ++   p     E+++tal r a  
  EPX73103.1 192 SIHTFELYKIACDSPGVLNLHAYNTILECMANNDYYITSSK--NMQKVVRVYVDMLNCFFVPDaktfETVITALCRRAKV 269
                 457899*********9************9999987766555..6*************65555544559999999987655 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.47
                 HHHHHHHHHHHHT-HHHHHHHHHHHH.HSSS---HHHHHHHHHHHHHC.HCSTTTHHHHHHHHHHHHHHHHHTT----HHHHHHHHHHHHHTT-HHHHH CS
    PPR_long  13 elrrqldkCskekDaaaAlelydkav.aegvrlaqyhynvllylcskaeaaseskknkalargfevfeamkakgvspnEatvtalarlaaakedgdlaf 110
                 +l+++l +   e  +++A+ +y ++  ++g++ ++  y  ++  +++  ++s+ k  + l++    f   ++ ++++    + al+r   +++  + +f
  EPX73103.1 291 DLQTELSDLRSEMPLQTAVFMYTSSLiNHGISYSSSFYAYFIDSIARYGTSSQLK--SLLENI--PF---ESIQADSHPKLLPALIRAFGKAKRLEVCF 382
                 5555555555666666666666655414556666666666665554433222211..112221..12...22334455566778888888888888888 PP

                 HHHHHHH....HH-S-.--HHHHHHHHHHHHHTT-HHHHH CS
    PPR_long 111 elvkeme....kagvs.PrLRsyaPaLaayckagdadkal 145
                 +l ++ +    +++ +     s++ ++ +y+++++ ++a+
  EPX73103.1 383 QLLQTYKlsdpTSNSDnTNVDSWEALMESYFETNHSGQAI 422
                 8888765212112221245556666666666666665555 PP

  == domain 3  score: 37.5 bits;  conditional E-value: 7.7e-13
                  HHHHHHHHHHH...T-HHHHHHHHHHHHHSSS---HHHHHHHHHHHHHC.HCSTTTHHHHHHHHHHHHHHHHHTT----HHHHHHHHHHHHHTT-HH CS
    PPR_long   14 lrrqldkCske...kDaaaAlelydkavaegvrlaqyhynvllylcskaeaaseskknkalargfevfeamkakgvspnEatvtalarlaaakedgd 107 
                  + + +++ +k+    Da++Al++++++++++v+ +   yn++l  + +a+++         ++ ++ f++mk+ g  p   t+ +++  a   +d  
  EPX73103.1  886 FAHLINNSTKRgdtDDATTALKIFEETKRHNVKPSVFLYNAVLSKLGRARRT---------TECWKLFQEMKEFGLLPTSVTYGTVINAACRIGDEA 973 
                  55556666665111689**************************999888655.........35799******************************* PP

                  HHHHHHHHHH.HH-S---HHHHHHHHHH.HHHTT-HHHHHHHHHHHHHCT----HHHHHHHHH CS
    PPR_long  108 lafelvkeme.kagvsPrLRsyaPaLaa.yckagdadkaleveehlkasgveleEaelaaLLk 168 
                  la++l  eme +++ +Pr   y+ +++     + + +kal   ++l ++++++  + ++ L++
  EPX73103.1  974 LAEKLFCEMEnQSNYQPRVAPYNTMIQFeVQTMYNREKALYYYNRLCSTEIQPSPHTYKLLMD 1036
                  *********956799********99875267789*******************9988888776 PP

  == domain 4  score: 6.5 bits;  conditional E-value: 0.0023
                  HHHHHHHHHHHHHSSS---HHHHHHHHHHHHHC.HCSTTTHHHHHHHHHHHHHHHHHTT----HH.HHHHHHHHHHHTT-HHHHHHHHHHHHH CS
    PPR_long   27 aaaAlelydkavaegvrlaqyhynvllylcskaeaaseskknkalargfevfeamkakgvspnEa.tvtalarlaaakedgdlafelvkemek 118 
                  +++ +++  ++++ gv+l++y+ n+l+   +k            +++++  f+ ++ +g+s  E+ t+  ++r   + +++++a e+v+++++
  EPX73103.1 1121 IIERVQIVSDMKKYGVSLNAYIVNALIKGFTKV---------GMISKARYYFDLLDCDGMSGKEPsTYENMVRAYLSVNNAEEAVEIVEQLKR 1204
                  344445555555555555555555555433222.........123444444555555555555432455555555555555555555555554 PP

>> RPM2  Mitochondrial ribonuclease P subunit (RPM2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1   0.00027      0.53      25      74 ..     218     267 ..     197     289 .. 0.73
   2 ?    1.5   0.0      0.19   3.7e+02      45      71 ..     906     932 ..     883     970 .. 0.71
   3 ?   -2.9   0.1       4.4   8.7e+03      88     110 ..    1013    1035 ..    1003    1038 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00027
        RPM2  25 LetqikeiekiyekkeynkinalyksLkrneivpslelfekvLksivkrd 74 
                 Le   ++   i + k++ k+  +y  +     vp+ ++fe v++++++r 
  EPX73103.1 218 LECMANNDYYITSSKNMQKVVRVYVDMLNCFFVPDAKTFETVITALCRRA 267
                 44444444444455888888888888765555999999999999999885 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.19
        RPM2  45 nalyksLkrneivpslelfekvLksiv 71 
                   +++  kr ++ ps+ l++ vL  + 
  EPX73103.1 906 LKIFEETKRHNVKPSVFLYNAVLSKLG 932
                 446666677777777777777776654 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 4.4
        RPM2   88 LtvyqDiisnklkPnkeiyeivl 110 
                  L  y  + s +++P+  +y++ +
  EPX73103.1 1013 LYYYNRLCSTEIQPSPHTYKLLM 1035
                  55677888888899998888876 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.1     0.029        59      10      29 ..     448     467 ..     448     468 .. 0.88
   2 ?    6.2   0.1    0.0048       9.6       3      27 ..    1177    1201 ..    1177    1203 .. 0.93

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.029
      TPR_10  10 nalrqrgrydeAealleeal 29 
                 n+l+q+g+y+eA  +l+ al
  EPX73103.1 448 NRLSQLGDYKEAAYWLDLAL 467
                 689*********99998776 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.0048
      TPR_10    3 sslnNLanalrqrgrydeAeallee 27  
                  s++ N+ +a+ ++++ +eA+++ e+
  EPX73103.1 1177 STYENMVRAYLSVNNAEEAVEIVEQ 1201
                  6899*****************9886 PP

>> ATP13  Mitochondrial ATPase expression
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.29   5.7e+02      26      67 ..     224     266 ..     208     271 .. 0.66
   2 ?    4.0   0.1     0.021        42      55      82 ..     403     430 ..     326     442 .. 0.85
   3 ?    1.2   0.1      0.15   3.1e+02      53      81 ..     476     504 ..     465     506 .. 0.90
   4 ?   -0.4   0.0       0.5     1e+03      58      79 ..     551     572 ..     532     575 .. 0.85
   5 ?   -2.5   0.1       2.3   4.5e+03      51      89 ..    1102    1138 ..    1082    1148 .. 0.79
   6 ?    1.6   0.0      0.12   2.4e+02      58      86 ..    1180    1209 ..    1175    1232 .. 0.81

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.29
       ATP13  26 kvWgiidesgkleek.etkvks.dsplyPtselLkaivssfsyn 67 
                 + +  i++s+++++  ++ v+  +  ++P+ ++ ++++++++ +
  EPX73103.1 224 NDYY-ITSSKNMQKVvRVYVDMlNCFFVPDAKTFETVITALCRR 266
                 5555.455554444433444446677889999999999999876 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.021
       ATP13  55 elLkaivssfsynneiesAlklvdkfsk 82 
                 +  +a+++s++ +n+  +A++l+++f+k
  EPX73103.1 403 DSWEALMESYFETNHSGQAIQLMESFFK 430
                 4558999*****************9986 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.15
       ATP13  53 tselLkaivssfsynneiesAlklvdkfs 81 
                 +s +L +i+++ ++ +++e  + +v kf+
  EPX73103.1 476 DSSILSSILEAACKAKDVEFSIAFVRKFT 504
                 799**********************9995 PP

  == domain 4  score: -0.4 bits;  conditional E-value: 0.5
       ATP13  58 kaivssfsynneiesAlklvdk 79 
                  +i ++f+ n++++ Al+l++k
  EPX73103.1 551 STIYKAFIDNGHVSLALRLLKK 572
                 6899**************9876 PP

  == domain 5  score: -2.5 bits;  conditional E-value: 2.3
       ATP13   51 yPtselLkaivssfsynneiesAlklvdkfskkYpeiel 89  
                  + + +l  + ++s+++n++i + +++v++ +kkY+ ++l
  EPX73103.1 1102 RLDANLFQSQIESLIANDRIIERVQIVSD-MKKYG-VSL 1138
                  55778888889999999999999999988.46777.554 PP

  == domain 6  score: 1.6 bits;  conditional E-value: 0.12
       ATP13   58 kaivssfsynneiesAlklvdkfskk.Ype 86  
                  +++v ++ + n+ e+A+++v+++ +k Yp 
  EPX73103.1 1180 ENMVRAYLSVNNAEEAVEIVEQLKRKrYPA 1209
                  57899*****************98643774 PP

>> Imm41  Immunity protein 41
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.1    0.0082        16      32      97 ..     213     278 ..     210     299 .. 0.75
   2 ?    2.3   0.0       0.1     2e+02      12      54 ..     444     485 ..     441     521 .. 0.82
   3 ?   -2.7   0.0       3.6   7.3e+03      74      93 ..     998    1019 ..     992    1021 .. 0.75
   4 ?   -2.6   0.0       3.5   6.9e+03      32      63 ..    1192    1218 ..    1184    1228 .. 0.77

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0082
       Imm41  32 lenalieilkkyk.dkdlkrelvkgisytykrilelllvhfaksdlfeisdipdrfiafyERlkyil 97 
                 ++n ++e+++++    + ++++ k +  +y  +l+ ++v+ ak+++  i+ +  r ++  +R k+++
  EPX73103.1 213 AYNTILECMANNDyYITSSKNMQKVVR-VYVDMLNCFFVPDAKTFETVITALCRRAKVIEDRTKFLV 278
                 79**********966777888888888.***************888777555555444444444443 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.1
       Imm41  12 nsfigklleessfndeeyWklenalieilkkykdkdlkrelvk 54 
                 n f+ +l + + +++ +yW l+ al++i + +kd  +   +++
  EPX73103.1 444 NCFLNRLSQLGDYKEAAYW-LDLALVKIDTYQKDSSILSSILE 485
                 899****************.67888999888887777666654 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 3.6
       Imm41   74 sdlfeisdipdr..fiafyERl 93  
                    +fe++ +++r    ++y+Rl
  EPX73103.1  998 MIQFEVQTMYNRekALYYYNRL 1019
                  4678999998886678999998 PP

  == domain 4  score: -2.6 bits;  conditional E-value: 3.5
       Imm41   32 lenalieilkkykdkdlkrelvkgisytykri 63  
                  +e+a +ei+++ k k  +  +v+ is     +
  EPX73103.1 1192 AEEA-VEIVEQLKRKRYPAPVVNRIS----SL 1218
                  5566.9*******9999999999998....33 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1254 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       774  (0.0431703); expected 358.6 (0.02)
Passed bias filter:                      548  (0.030565); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.91u 0.34s 00:00:01.25 Elapsed: 00:00:00.53
# Mc/sec: 7085.76
//
Query:       EPX73104.1  [L=567]
Description: ARS-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.4e-49  168.1   0.2    4.6e-49  166.4   0.2    1.9  1  DDE_1          DDE superfamily endonuclease
    1.4e-23   82.4   0.4    4.7e-23   80.7   0.4    2.0  1  HTH_ABP1_N     Fission yeast centromere protein N-terminal do
      9e-17   60.9   2.0    2.2e-16   59.6   0.6    2.4  2  HTH_Tnp_Tc5    Tc5 transposase DNA-binding domain
     0.0014   18.5   0.0     0.0031   17.4   0.0    1.7  1  DYW_deaminase  DYW family of nucleic acid deaminases


Domain annotation for each model (and alignments):
>> DDE_1  DDE superfamily endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.4   0.2     1e-52   4.6e-49       3     174 ..     253     427 ..     251     428 .. 0.96

  Alignments for each domain:
  == domain 1  score: 166.4 bits;  conditional E-value: 1e-52
       DDE_1   3 rltvllcanaagsekLkplvigkaksprafkngektkkkldveyksnrkawltssifeeWLkvfdkrleaekrkilLlldssrshe.tvel...lesel 97 
                  +tv++c+na+g+e+L++++ig++k+prafkn+++ +++l++ ++ n+ a +   i+eeWL++fd ++e  +r +lLlldss  h+  +e+   ++  l
  EPX73104.1 253 FVTVTICCNADGTERLPLWIIGYSKNPRAFKNAKVPPHNLNIIWRHNGIATMNVPIMEEWLRWFDSQME--GRSVLLLLDSSSVHQlSIENirkSNFPL 349
                 69*******************************************************************..***************9777778777889 PP

       DDE_1  98 qniklvflPassasllqPldqgvvselKarYrrqllqalleeqnrlskeqkkltlldalkfikkAwn.avsketiksa 174
                 +n+ +v lP++++s+  P++qg+ +++Ka+Yrr ++  +l + +++ ++ + +++l+a++++ + w+ +++++ti+  
  EPX73104.1 350 NNVLVVLLPPNMTSISNPCEQGINKTFKAHYRRSWIYDILLKTEKDINPLHSINILQAVRWMVDIWDyQIEPATIAGY 427
                 ***************************************************************************865 PP

>> HTH_ABP1_N  Fission yeast centromere protein N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.7   0.4     1e-26   4.7e-23       1      59 [.       5      63 ..       5      65 .. 0.98

  Alignments for each domain:
  == domain 1  score: 80.7 bits;  conditional E-value: 1e-26
  HTH_ABP1_N  1 rRkaiskeqkkaLRawafqqnprpsqkaliaWFeqeygqkisqstvSeiLSskYayLDd 59
                rR+ai+ ++kka+R++++  +++p qka+ +WFe++++++isq+t+S++LSskY+yLD+
  EPX73104.1  5 RRQAITIAEKKAIRNFYSGFESKPGQKAIKEWFEDKFQKNISQATISTVLSSKYDYLDH 63
                8*********************************************************7 PP

>> HTH_Tnp_Tc5  Tc5 transposase DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.57   2.6e+03       6      20 ..      31      45 ..      30      50 .. 0.78
   2 !   59.6   0.6   4.9e-20   2.2e-16       1      62 [.      79     141 ..      79     145 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.57
                 HHHHHHHHHHC-CT- CS
  HTH_Tnp_Tc5  6 kaLleWirqlrergi 20
                 ka++eW+++  +++i
   EPX73104.1 31 KAIKEWFEDKFQKNI 45
                 8999****9866665 PP

  == domain 2  score: 59.6 bits;  conditional E-value: 4.9e-20
                  THHHHHHHHHHHHHHC-CT---SCHHHHHHHHHHH.HHSSSCT-TT-S--CHHHHHHHHHTS- CS
  HTH_Tnp_Tc5   1 spelEkaLleWirqlrergipitgelirekAqela.slaadlgepdfkaSkgWldrFkkRhgl 62 
                  +p+lE+aL+eW  ++ +++++++ e ir +A el+ + +++ + p++ +S+gWl++FkkRh +
   EPX73104.1  79 YPVLENALAEWRLRMEKQNVSVSSESIRHAAMELWkKIPIYQNQPPPAFSNGWLEKFKKRHSF 141
                  799**********************************************************65 PP

>> DYW_deaminase  DYW family of nucleic acid deaminases
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   6.8e-07    0.0031       5      58 ..      10      63 ..       6     106 .. 0.89

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 6.8e-07
  DYW_deaminase  5 lvegkkkvvkfasgdkahpeskeieekleelsqrllsigyapdlekalhdvkee 58
                   ++  kk + +f sg+++ p +k i+e +e+ +q+ +s++    + + ++d+ + 
     EPX73104.1 10 TIAEKKAIRNFYSGFESKPGQKAIKEWFEDKFQKNISQATISTVLSSKYDYLDH 63
                   5667799******************************************99776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (567 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       469  (0.0261587); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 3949.59
//
Query:       EPX73105.1  [L=249]
Description: pyridoxamine 5'-phosphate oxidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.9e-17   63.1   0.9    5.6e-17   61.5   0.9    1.9  1  PNP_phzG_C       Pyridoxine 5'-phosphate oxidase C-terminal d
    5.7e-16   58.5   0.0      1e-15   57.7   0.0    1.4  1  Putative_PNPOx   Pyridoxamine 5'-phosphate oxidase
     0.0047   17.5   0.0     0.0093   16.6   0.0    1.5  1  Pyridox_oxase_2  Pyridoxamine 5'-phosphate oxidase


Domain annotation for each model (and alignments):
>> PNP_phzG_C  Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.5   0.9   9.4e-21   5.6e-17       1      43 []     207     249 .]     207     249 .] 0.98

  Alignments for each domain:
  == domain 1  score: 61.5 bits;  conditional E-value: 9.4e-21
  PNP_phzG_C   1 WgGyrvvPeeiEFWqgrpsRlHdRfrYereeedgkWkierLsP 43 
                 WgG+r+vP eiEFWqg++ RlHdRf ++re+ d+ +++ rLsP
  EPX73105.1 207 WGGIRIVPLEIEFWQGGQYRLHDRFSFRRENLDSDYQLVRLSP 249
                 *****************************99899********9 PP

>> Putative_PNPOx  Pyridoxamine 5'-phosphate oxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.7   0.0   1.7e-19     1e-15       7      88 .]      69     151 ..      63     151 .. 0.95

  Alignments for each domain:
  == domain 1  score: 57.7 bits;  conditional E-value: 1.7e-19
                     HHHHHSSEEEEEEEE.TTSEEEEEEEEEEEETTTTEEEEEEETTS.HHHHHHHHH-EEEEEEEETTGSEEEEEEEEEEEESCHH CS
  Putative_PNPOx   7 eflaeskavvlATvd.edGrPnvspvllkagdgrdgivfatnads.rklrnleenprvallflddelgrgvrieGtaelvsdge 88 
                     +++++++  +l++++ ++Gr+++++vllk++d r g++++tn ++ +k+++ e+np+++l+f++++l r+vrieG +e ++++e
      EPX73105.1  69 SAIQSPESTTLSSARlPSGRVSSRLVLLKELDHR-GFIIFTNLETsKKAQDWETNPYASLSFWWESLQRQVRIEGIVEHLTREE 151
                     67999999**************************.999999999879********************************99986 PP

>> Pyridox_oxase_2  Pyridoxamine 5'-phosphate oxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.6e-06    0.0093       9      96 ..      63     144 ..      56     148 .. 0.65

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.6e-06
                      HHHHHHTT-GGGGEEEEEEE-T.TS-EEEEEEE---B-TT...SS-.EEEEEETTSHHHHHHH.H--EEEEEEEETTTTEEEEEEEEE CS
  Pyridox_oxase_2   9 esalkknkkkkstefqlaTvdeeegkPrvRtvvfRgfleekkeesdvltfttDvrseKvkqlessnaaveavfylketreQfRisGka 96 
                      ++a k++  ++ ++ +l++ + ++g+ ++R v +++      ++   + ft    s+K+++ e +n+ + + f+ ++ ++Q Ri+G +
       EPX73105.1  63 QEASKDSAIQSPESTTLSSARLPSGRVSSRLVLLKEL-----DHRGFIIFTNLETSKKAQDWE-TNPYASLSFWWESLQRQVRIEGIV 144
                      4444544444444444444443344444444443333.....355677887778888888888.9*********************76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       578  (0.0322383); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 1699.99
//
Query:       EPX73106.1  [L=433]
Description: ornithine decarboxylase Spe1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.4e-78  262.1   0.0    6.1e-78  261.6   0.0    1.2  1  Orn_Arg_deC_N    Pyridoxal-dependent decarboxylase, pyridoxal
    2.3e-20   72.7   0.0    3.2e-20   72.2   0.0    1.4  1  Orn_DAP_Arg_deC  Pyridoxal-dependent decarboxylase, C-termina


Domain annotation for each model (and alignments):
>> Orn_Arg_deC_N  Pyridoxal-dependent decarboxylase, pyridoxal binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  261.6   0.0   6.8e-82   6.1e-78       3     247 .]      77     304 ..      75     304 .. 0.98

  Alignments for each domain:
  == domain 1  score: 261.6 bits;  conditional E-value: 6.8e-82
                    HHHHHHHHHHHHCTCCEEEEEGGG---HHHHHHHHHTTEEEEESSHHHHHHHHHCTTTGGGEEEEESS--HHHHHHHHHCTHTEEEESSHHHHHHH CS
  Orn_Arg_deC_N   3 sierklkrwkkalprikvfYavKansdlavlellaelGlgldcaSkaElelvlaagvsperiifanpckqreelryalekgvkvvtvdnveelekl 98 
                     + r+l rw+++lpr+++fYavK+n+d++vl ll++ G+g+dcaSk+E+e+vl++gv+ e+i++anpck   ++ry ++kg++ +t+dn++el+k+
     EPX73106.1  77 AVYRQLVRWHTKLPRVQPFYAVKCNPDPHVLALLNKFGTGFDCASKGEIEQVLNMGVPSEKIVYANPCKAITYIRYSASKGIDLMTFDNADELYKV 172
                    6899******************************************************************************************** PP

                    HHHHCCEEEEEEEE-SCCSSSSTCCCSSSTTSSSSEEHCHHHHHHHHHHHHTTEEEEEEE---BSSC-SCHHHHHHHHHHHHHHHHHHHHT---SE CS
  Orn_Arg_deC_N  99 aklapeakvllRiktdvsaatcelistggessKFGaaleeavealleaakeenlqlvGvsfHvGSgvsdleafvkavekalklfdelaelGvklki 194
                    ++++p+a++llRi+td+s + c+l      s KFGa+l e++  ll++ak+++l++vGvsfHvGSg  d +af++a+++++ +fd++   G++ ++
     EPX73106.1 173 KQHHPNARLLLRISTDDSGSLCRL------SLKFGASL-EDTGSLLDLAKSLDLNVVGVSFHVGSGSYDSSAFLDAIRRSRFVFDQGLDRGFNFDL 261
                    ************************......********.********************************************************* PP

                    EE--S-BS-HCSTTSSSSTHHHHHHHHHHHHHHHHHTSSS-EEEE--SHHHHG CS
  Orn_Arg_deC_N 195 LdvGGGfgveyeeeeeplkleeiaekirealeeafpgdkevtiiaEpGRalva 247
                    Ld+GGGf++e         ++ +a  +r+al+ +f+  ++v+ii+EpGR++va
     EPX73106.1 262 LDIGGGFSSET--------FDAVADLVRPALDTYFE--PSVRIISEPGRFFVA 304
                    *******6654........689*************8..99***********98 PP

>> Orn_DAP_Arg_deC  Pyridoxal-dependent decarboxylase, C-terminal sheet domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.2   0.0   3.6e-24   3.2e-20       5      98 .]     188     406 ..      70     406 .. 0.68

  Alignments for each domain:
  == domain 1  score: 72.2 bits;  conditional E-value: 3.6e-24
                      E............................................................................................. CS
                      x............................................................................................. RF
  Orn_DAP_Arg_deC   5 d............................................................................................. 5  
                      d                                                                                             
       EPX73106.1 188 Ddsgslcrlslkfgasledtgslldlaksldlnvvgvsfhvgsgsydssafldairrsrfvfdqgldrgfnfdlldigggfssetfdavadlvr 281
                      0555555555555555555555555555555555555556666666666666666666666667777777777777777777777777777777 PP

                      .......................GGEEEEEEEEEEEEET..CEEEEEES--TTTS-HHHHCTT-S-E.ESBT.......T-SCEEC.EEEEEEE CS
                      .......................xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxx.xxxx.......xxxxxxxxxxxxxxx RF
  Orn_DAP_Arg_deC   6 .......................eagvLvtrViavkese..kkkfvivdaGmndllrpalygsfhei.pvke.......eeaekeeeeeeevdv 66 
                                             +a++L+++Via+++    +k +++v++G+   l   l+++ h++  v +       +++   ++ ++ +++
       EPX73106.1 282 paldtyfepsvriisepgrffvaNAFTLAVNVIAKRKLAdeEKVMYYVNDGVYGSLNCILFDHQHPVaRVLKkgsqylyNTH--LSTGNHHCSI 373
                      77777777777777777777777*************9442359*********666666666666777655558999985333..2334578*** PP

                      E-SSSSTT-EEEEEEEEEE.--TT-EEEESS-S CS
                      xxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxx RF
  Orn_DAP_Arg_deC  67 vGptCesgDvlakdrelpe.levGdllafedaG 98 
                      +GptC+s D +a+d +lp  l+vGd+++f +aG
       EPX73106.1 374 WGPTCDSLDAIASDARLPYeLNVGDWIYFDNAG 406
                      *******************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (433 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       373  (0.0208043); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 3143.61
//
Query:       EPX73107.1  [L=434]
Description: adenylosuccinate synthetase Ade2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     6e-178  592.0   0.0   6.9e-178  591.8   0.0    1.0  1  Adenylsucc_synt  Adenylosuccinate synthetase


Domain annotation for each model (and alignments):
>> Adenylsucc_synt  Adenylosuccinate synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  591.8   0.0  3.9e-182  6.9e-178       1     418 [.      17     430 ..      17     431 .. 0.97

  Alignments for each domain:
  == domain 1  score: 591.8 bits;  conditional E-value: 3.9e-182
                      .EEEE-SSS-S-HHHHHHHHHTT-SEEEE-SB-TTSSEEEEETTEEEEESSS-GGGGSTT-EEEE-TTBEE-HHHHHHHHTTSS-TT......T CS
  Adenylsucc_synt   1 vvvvGaqwGDEGKGkivDllaeeadvvvRfqGGanAGHtvvvdgkkyklhllpSGilnpgvvnviGngvvvdpealleEieeleakgvelsker 94 
                      +vv+G+qwGDEGKGk+vD+l++++dv++R+qGG+nAGHt+ v++k+y++h+lpSG++np++vn+iG+gvvv ++a+++E+e+l++kg+++ ++r
       EPX73107.1  17 TVVLGSQWGDEGKGKLVDILCDSVDVCARCQGGNNAGHTIKVNDKTYDFHILPSGLVNPKCVNLIGTGVVVYLPAFFSELENLSSKGLDC-SNR 109
                      69**************************************************************************************88.7** PP

                      EEEETTSEE--HHHHHHHHHHHHH----------TTHHHHHHHHHTT---BGGGGGSHHHHHHHHHHHHHHTHHHHHHT...T-----HHHHHH CS
  Adenylsucc_synt  95 llisdrahlvlpyhkalDkleeaakgkkkiGtTkkGiGpayadkvarrgirvgdlldeeeleeklekllelknkllekldkeeleveelleell 188
                      ++isdra+lv+++h+ +D l+ea+ gk++iGtT+kGiGp y++k++r+girv++l++++e+e++++k+++  +k + +++   ++ve+ l +++
       EPX73107.1 110 IFISDRAQLVFDFHQRADVLNEAELGKQSIGTTGKGIGPSYSTKASRSGIRVHHLYRWDEFEARYRKNVSDLQKRYGAFE---YDVEAELVRYK 200
                      ************************999****************************************9977665655554...66656555679 PP

                      HHHHHHGGGEE-HHHHHHHHHHTT--EEEE--S-GGG-TTTSSTTSS-SS--SHHHHHHHTT--GGGEEEEEEEEESSEEESSSS--TTB--SH CS
  Adenylsucc_synt 189 kyaerlkpyvvdtvallnealkegkkvLfEGaqgtllDidhGtYPfvTsSnttaggaltglglapkkidevlgvvKAyttrvGeGpfptelkde 282
                      ++ae+lkpyvvd+v ++++alk++k++L+EGa++++lD+d+GtYPfvTsSntt+gg++tglg++p++i + +gv+KAyttrvG+G fpte  +e
       EPX73107.1 201 DLAEKLKPYVVDSVVFMHDALKQKKRILVEGANALMLDLDFGTYPFVTSSNTTIGGVCTGLGVPPQRIASSIGVTKAYTTRVGAGSFPTEQLNE 294
                      9*****************************************************************************************88** PP

                      HHHHHHHHTT-B-TTT--B-EEE-EEHHHHHHHHHHHT-SEEEEE-GGGGTT-SEEEEEEEEEETTEEESS--S.....-GEEEEEEEEE--.S CS
  Adenylsucc_synt 283 vgeklrekGkEfgtttgrpRrcGwlDlvllryavrvngvtelaltklDvldgldeikvcvaYkldgkeldefpasleelekvepvyeelpgWke 376
                      +ge+l+++G+E+g+ttgr+RrcGwlDlv+++y+ ++ng+t+l+ltklD+ld ++e+kv+vaY +dgk++++fpa+l++le++e+vye+lpgW++
       EPX73107.1 295 IGEHLQTVGREYGVTTGRKRRCGWLDLVVVKYSSMINGYTSLNLTKLDILDAFPEVKVAVAYIIDGKRYETFPADLSSLENAEIVYETLPGWQT 388
                      ********************************************************************************************** PP

                      --TT---GGGS-HHHHHHHHHHHHHHTS-EEEEE-SSSTT-E CS
  Adenylsucc_synt 377 disgvrsfedlpenakkyvefieellgvpvkiisvGpereqt 418
                      ++ g++++e++penakky++fie+++gvp+ +i+vGp+r+++
       EPX73107.1 389 STVGITRWEQMPENAKKYIQFIEDFVGVPIGFIGVGPGRNEM 430
                      ****************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (434 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       403  (0.0224776); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.38
# Mc/sec: 3389.93
//
Query:       EPX73108.1  [L=234]
Description: Ino80 complex subunit Iec1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.9e-08   33.8   5.2    2.1e-05   24.8   0.1    3.5  3  zf-H2C2_2       Zinc-finger double domain
    5.4e-07   29.7  18.5    2.6e-06   27.6   0.2    4.3  4  zf-C2H2         Zinc finger, C2H2 type
    4.3e-05   23.4   0.4     0.0039   17.1   0.0    2.6  2  zf-C2H2_6       C2H2-type zinc finger
    0.00012   22.7   1.4      0.028   15.1   0.3    4.6  5  FOXP-CC         FOXP coiled-coil domain
    0.00026   21.6   8.7    0.00044   20.8   0.2    3.7  4  zf-C2H2_4       C2H2-type zinc finger
      0.008   16.1   0.4      0.013   15.4   0.4    1.3  1  Thioredoxin_13  Thioredoxin-like domain
  ------ inclusion threshold ------
      0.014   15.8   0.0        6.6    7.3   0.0    2.6  2  zf-met          Zinc-finger of C2H2 type
       0.23   11.3   1.9       0.33   10.8   0.0    2.1  3  zf-C2H2_11      zinc-finger C2H2-type
       0.54   10.1   0.1       0.54   10.1   0.1    3.0  3  zf-H2C2_5       C2H2-type zinc-finger domain


Domain annotation for each model (and alignments):
>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.9   0.7    0.0092        18       1      23 [.      40      67 ..      40      69 .. 0.82
   2 !   24.8   0.1     1e-08   2.1e-05       1      26 []      76     103 ..      76     103 .. 0.92
   3 ?    3.5   0.0     0.054   1.1e+02       1      10 [.     106     116 ..     106     124 .. 0.82

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0092
   zf-H2C2_2  1 nLrrHirk.Htgekp..yeCp..lCdka 23
                nL+ Hi + H g ++  y+C+   C+ +
  EPX73108.1 40 NLVHHIHNgHIGNRRpkYTCEwdDCPRK 67
                7999**988**997448***98888865 PP

  == domain 2  score: 24.8 bits;  conditional E-value: 1e-08
   zf-H2C2_2   1 nLrrHirkHtgekpyeCp..lCdkaFkt 26 
                 +L  H+r+Htgekp+ C+  +Cd +F++
  EPX73108.1  76 ALIAHLRSHTGEKPFICSipECDRSFTR 103
                 5789**********************85 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.054
   zf-H2C2_2   1 nLrrHirk.Ht 10 
                 +L +H+r+ H 
  EPX73108.1 106 ALAKHMRTvHE 116
                 699****6585 PP

>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.6    0.0016       3.1       3      23 .]      26      49 ..      25      49 .. 0.90
   2 ?    4.2   1.7     0.034        68       1      23 []      57      84 ..      57      84 .. 0.82
   3 !   27.6   0.2   1.3e-09   2.6e-06       1      23 []      90     115 ..      90     115 .. 0.95
   4 ?   -2.9   0.2       6.3   1.3e+04      15      20 ..     198     203 ..     198     204 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0016
                ET..TTTEEESSHHHHHHHHHC.C CS
     zf-C2H2  3 Cp..dCgksFkrksnLkrHirt.H 23
                C   +C++   + +nL++Hi   H
  EPX73108.1 26 CRwqGCDQDLYTLDNLVHHIHNgH 49
                77779***************9888 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.034
                EEET..TTT...EEESSHHHHHHHHHCC CS
     zf-C2H2  1 ykCp..dCg...ksFkrksnLkrHirtH 23
                y+C+  dC+    + +++  L +H+r+H
  EPX73108.1 57 YTCEwdDCPrkgLVQTSRFALIAHLRSH 84
                8888889997776678899999999998 PP

  == domain 3  score: 27.6 bits;  conditional E-value: 1.3e-09
                 EEET..TTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   1 ykCp..dCgksFkrksnLkrHirt.H 23 
                 + C+  +C++sF+r++ L +H+rt H
  EPX73108.1  90 FICSipECDRSFTRSDALAKHMRTvH 115
                 779999******************99 PP

  == domain 4  score: -2.9 bits;  conditional E-value: 6.3
                 HHHHHH CS
     zf-C2H2  15 nLkrHi 20 
                 +L++H+
  EPX73108.1 198 MLMKHL 203
                 699997 PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.1     0.032        64      16      24 ..      76      84 ..      76      87 .. 0.89
   2 !   17.1   0.0     2e-06    0.0039       5      25 ..      95     116 ..      90     117 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.032
   zf-C2H2_6 16 aLggHkksH 24
                aL+ H++sH
  EPX73108.1 76 ALIAHLRSH 84
                8******** PP

  == domain 2  score: 17.1 bits;  conditional E-value: 2e-06
   zf-C2H2_6   5 svCsksFpslqaLggHkks.Hr 25 
                 ++C++sF   +aL +H+++ H+
  EPX73108.1  95 PECDRSFTRSDALAKHMRTvHE 116
                 48*****************554 PP

>> FOXP-CC  FOXP coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.3   1.4e-05     0.028       6      32 ..      25      51 ..      22      58 .. 0.89
   2 ?    3.1   0.1     0.075   1.5e+02       6      28 ..      58      83 ..      54      89 .. 0.71
   3 !   13.7   0.0   3.8e-05     0.075       6      33 ..      91     118 ..      88     121 .. 0.93
   4 ?   -2.0   0.4       2.9   5.7e+03      29      46 ..     129     146 ..     126     157 .. 0.57
   5 ?    0.5   0.3      0.47   9.4e+02      44      68 ..     181     203 ..     168     223 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.4e-05
     FOXP-CC  6 vCkWPgCekvledveeflkhlnseHal 32
                +C+W gC++ l +++++++h+++ H  
  EPX73108.1 25 ICRWQGCDQDLYTLDNLVHHIHNGHIG 51
                7**********************9965 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.075
     FOXP-CC  6 vCkWPgC...ekvledveeflkhlns 28
                +C+W +C     v ++  ++++hl+s
  EPX73108.1 58 TCEWDDCprkGLVQTSRFALIAHLRS 83
                7******5433355666678888876 PP

  == domain 3  score: 13.7 bits;  conditional E-value: 3.8e-05
     FOXP-CC   6 vCkWPgCekvledveeflkhlnseHald 33 
                 +C  P+C++ ++ ++++ kh+++ H+ d
  EPX73108.1  91 ICSIPECDRSFTRSDALAKHMRTVHEAD 118
                 6999*********************986 PP

  == domain 4  score: -2.0 bits;  conditional E-value: 2.9
     FOXP-CC  29 eHalddkstaqlrvqmqv 46 
                 +H +  +++a + vq+ +
  EPX73108.1 129 AHPMHPQNVANAMVQSAR 146
                 566666666666666543 PP

  == domain 5  score: 0.5 bits;  conditional E-value: 0.47
     FOXP-CC  44 mqvvqqlekqlvkEkerLqaMmaHL 68 
                 m  +q+l+ q vkE erL  M +HL
  EPX73108.1 181 MYHLQKLKLQWVKE-ERLMLM-KHL 203
                 55677888888887.466544.455 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.2      0.33   6.6e+02       3      20 ..      26      45 ..      24      47 .. 0.81
   2 ?    2.9   0.1      0.13   2.7e+02      12      23 ..      73      84 ..      57      85 .. 0.69
   3 !   20.8   0.2   2.2e-07   0.00044       1      24 []      90     115 ..      90     115 .. 0.95
   4 ?   -3.4   0.0         9   1.8e+04      16      21 ..     199     204 ..     194     205 .. 0.73

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.33
   zf-C2H2_4  3 Cpi..CgksFsskkaLlrHl 20
                C++  C++   + ++L +H+
  EPX73108.1 26 CRWqgCDQDLYTLDNLVHHI 45
                666679999999999*9997 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.13
   zf-C2H2_4 12 skkaLlrHlkth 23
                s+ aL  Hl++h
  EPX73108.1 73 SRFALIAHLRSH 84
                4555999***99 PP

  == domain 3  score: 20.8 bits;  conditional E-value: 2.2e-07
   zf-C2H2_4   1 fkCpi..CgksFsskkaLlrHlkthH 24 
                 f+C+i  C++sF++++aL +H++t+H
  EPX73108.1  90 FICSIpeCDRSFTRSDALAKHMRTVH 115
                 7899999******************9 PP

  == domain 4  score: -3.4 bits;  conditional E-value: 9
   zf-C2H2_4  16 LlrHlk 21 
                 L +Hl+
  EPX73108.1 199 LMKHLE 204
                 788986 PP

>> Thioredoxin_13  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.4   6.4e-06     0.013      40     119 ..     128     214 ..     108     220 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 6.4e-06
                     HTGGGGSTTCS-SSTTT..TTTTTTHHHHHHS--TT--EEEETTEEE-GGG-SHHHH....HHHHHHHHH.HHHHHGGGS--HHHHH CS
  Thioredoxin_13  40 qnFPkyassLarvkvse..elreeieanqerlvqpgqnalwlNGvaldesdidpfsL....ldlLrkErk.llnslkklglsseqas 119
                     +  P++ + +a+  v++  e r++++++q   +++     wl+  ++++s +d++ L    l+ +++Er  l++ l++l+++seqa+
      EPX73108.1 128 KAHPMHPQNVANAMVQSarEARAQQQQQQGTGIPNEYMENWLDAATMPKSPHDMYHLqklkLQWVKEERLmLMKHLENLNIKSEQAR 214
                     56799999999996666225555555555556***********************99554555688888757899**********97 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0    0.0097        19      11      23 ..      72      84 ..      70      85 .. 0.91
   2 ?    7.3   0.0    0.0033       6.6       6      21 ..      97     112 ..      95     113 .. 0.95

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0097
      zf-met 11 nsesqlksHlqGK 23
                +s+ +l++Hl+++
  EPX73108.1 72 TSRFALIAHLRSH 84
                8999********8 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0033
      zf-met   6 CnvtfnsesqlksHlq 21 
                 C+++f+   +l  H++
  EPX73108.1  97 CDRSFTRSDALAKHMR 112
                 **************97 PP

>> zf-C2H2_11  zinc-finger C2H2-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       4.2   8.4e+03      15      24 ..      72      81 ..      68      82 .. 0.68
   2 ?   10.8   0.0   0.00017      0.33       9      28 ..      96     115 ..      95     116 .. 0.96
   3 ?   -1.7   0.4       1.3   2.6e+03      18      24 ..     197     203 ..     196     204 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 4.2
  zf-C2H2_11 15 tSqlsLsRHl 24
                tS  +L  Hl
  EPX73108.1 72 TSRFALIAHL 81
                7777777776 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00017
  zf-C2H2_11   9 eCGlcftSqlsLsRHlfIvH 28 
                 eC + ft + +L +H++ vH
  EPX73108.1  96 ECDRSFTRSDALAKHMRTVH 115
                 7******************* PP

  == domain 3  score: -1.7 bits;  conditional E-value: 1.3
  zf-C2H2_11  18 lsLsRHl 24 
                 l+L +Hl
  EPX73108.1 197 LMLMKHL 203
                 79****8 PP

>> zf-H2C2_5  C2H2-type zinc-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.7      0.78   1.6e+03      14      24 ..      39      49 ..      37      51 .. 0.79
   2 ?    0.4   0.0      0.28   5.6e+02      17      26 .]      78      86 ..      74      86 .. 0.84
   3 ?   10.1   0.1   0.00027      0.54       4      25 ..      95     116 ..      95     117 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.78
   zf-H2C2_5 14 snLkRHlrrkH 24
                +nL +H+ + H
  EPX73108.1 39 DNLVHHIHNGH 49
                59999998766 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.28
   zf-H2C2_5 17 kRHlrrkHtg 26
                  Hlr  Htg
  EPX73108.1 78 IAHLR-SHTG 86
                56***.**98 PP

  == domain 3  score: 10.1 bits;  conditional E-value: 0.00027
   zf-H2C2_5   4 sqCDYstawksnLkRHlrrkHt 25 
                 ++CD s ++++ L +H+r++H+
  EPX73108.1  95 PECDRSFTRSDALAKHMRTVHE 116
                 57888889999**********6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (234 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1004  (0.0559987); expected 358.6 (0.02)
Passed bias filter:                      481  (0.026828); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 1633.32
//
Query:       EPX73109.1  [L=257]
Description: hypothetical protein SOCG_00865 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       949  (0.052931); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1941.42
//
Query:       EPX73110.1  [L=113]
Description: hypothetical protein SOCG_00866 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2867  (0.159909); expected 358.6 (0.02)
Passed bias filter:                      678  (0.0378158); expected 358.6 (0.02)
Passed Vit filter:                        72  (0.00401584); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.28s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 806.13
//
Query:       EPX73111.1  [L=282]
Description: outer membrane voltage-dependent anion-selective channel [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-64  217.8   4.2    2.1e-64  217.6   4.2    1.0  1  Porin_3   Eukaryotic porin


Domain annotation for each model (and alignments):
>> Porin_3  Eukaryotic porin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  217.6   4.2   1.2e-68   2.1e-64       1     270 []       2     275 ..       2     275 .. 0.98

  Alignments for each domain:
  == domain 1  score: 217.6 bits;  conditional E-value: 1.2e-68
                 S---CCCCCHHHHHHHHCCHTTTECEEEEEEEECCECCEEEEEEEETTTS-ECEEEEEEEEE..TCCCEEEEEECCCSCCEEEEEECCSSTTCEEEEEE CS
     Porin_3   1 nPgtyedlgkeakdllpkdYhfeglkldvtkktslgvaFqvshsfslgsgkvsysfeakykd..kgltltlkgntdndlsltarvneqlaeglklklsa 97 
                 +P++y+ + k + dll +d+ ++   l+v +++++gv F+vs+ +   +g +++++e++++d  +glt+++ ++t+n l+ ++ + +q+a+gl++ +++
  EPX73111.1   2 APPAYAAIDKLCSDLLQRDFPIGATLLNVRTTAPNGVVFNVSGNQD-AKGIIAGKLETNFADkaNGLTMSQGWTTANVLESKIGLTNQFAQGLHVNVNT 99 
                 5*********************************************.588************************************************* PP

                 EE-TTT--EEEEEEEEEEETTEEEEEEEECTCEEEEEEEEEEECTSTEEEEEEEEEECTTTCCEEEEEEEEEEECSEEEEEEEEETTTEEEEEEEEECC CS
     Porin_3  98 qltpekgkksakleldykgddftaslklgnsktpvvvasllqsvtpglalGaeavydtasgkltkyaaalsyaardwiaslqllnnggaltasyyqkvs 196
                 +++p +  k a l+l++ ++ ++  + +    +  +v++++++++ g+++Gae++yd+++g+++kyaa+++y a+ + ++l+++nn +a++asyy++vs
  EPX73111.1 100 TFSPATADKTAILNLEHEHPLIRSHAVVNA-LERKFVGDFTVGHE-GFLAGAEFGYDVQKGSVSKYAATIGYQASPFLLALKASNNLSAFRASYYHRVS 196
                 ***********************9998875.89************.***************************************************** PP

                 TTEEEEEEEEEETTEEEEEEE..EEEEEEECTCEEEEEEEECTTEEEEEEEEEECTTEEEEEEEEEECCCT...EEEEE CS
     Porin_3 197 ekvevgaeltlnassqesttt..lGakydldksttvkakidsngkvgllleqkLrpgvtltlsaelDhkkn...ahkfG 270
                 ++ e+g ++t++ass ++++t  l+ ky+ldk+t+vk ki+++g++ +++ q++r gvt++l+ +lD++++   ahk G
  EPX73111.1 197 SQAEAGGNVTWDASSTANAVTleLASKYQLDKDTFVKSKINNAGIATMSYFQNIRQGVTVGLGLQLDTQRLgqpAHKAG 275
                 ****************9999988*********************************************99999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (282 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       351  (0.0195772); expected 358.6 (0.02)
Passed bias filter:                      269  (0.0150036); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.45
# Mc/sec: 1902.62
//
Query:       EPX73112.1  [L=456]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.3e-53  178.7  14.5    3.4e-32  111.8   0.1    5.5  5  DUF2408       Protein of unknown function (DUF2408)
     0.0009   18.4   0.5     0.0023   17.0   0.0    1.8  2  TelA          Toxic anion resistance protein (TelA)
  ------ inclusion threshold ------
      0.013   14.7   0.3      0.045   12.9   0.1    2.0  2  FH2           Formin Homology 2 Domain
      0.031   14.5   0.4         26    5.2   0.1    4.2  4  Rx_N          Rx N-terminal domain
      0.053   14.3   2.0        1.1   10.0   0.1    3.6  4  DUF2203       Uncharacterized conserved protein (DUF2203)
      0.088   12.3   3.9       0.51    9.8   0.1    3.3  3  DegS          Sensor protein DegS
        0.1   12.6   3.5        2.6    8.1   0.2    4.0  4  Laminin_II    Laminin Domain II
       0.16   11.8   5.5       0.22   11.3   0.1    3.7  5  SKA2          Spindle and kinetochore-associated protein 2
        1.1    9.5   5.5       0.26   11.5   0.7    2.4  3  I_LWEQ        I/LWEQ domain
        1.3    9.1   5.3          5    7.2   0.2    3.6  5  DUF1664       Protein of unknown function (DUF1664)
        1.4    9.4   4.8         16    6.0   0.5    3.4  4  Gliadin       Cys-rich Gliadin N-terminal


Domain annotation for each model (and alignments):
>> DUF2408  Protein of unknown function (DUF2408)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   1.0   0.00011      0.17       5      63 ..      10      65 ..       8     110 .. 0.83
   2 ?    5.4   0.2     0.016        25       6      57 ..     120     163 ..     117     170 .. 0.74
   3 !  111.8   0.1   2.1e-35   3.4e-32       2     135 .]     172     297 ..     171     297 .. 0.97
   4 !   27.0   0.0   3.3e-09   5.5e-06      44     124 ..     300     374 ..     298     376 .. 0.89
   5 !   34.8   0.4   1.3e-11   2.2e-08       4     104 ..     354     443 ..     352     452 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00011
     DUF2408  5 spelepiyekLvsirrsLlslaakskaeeakeseevkeelkelkeeLkkieskrdeegk 63
                + e +pi+ekL+ ir+ L+ l  + ++    ++++v +  ++l e+L+ i+++r + +k
  EPX73112.1 10 PVEEQPILEKLIGIRQRLAVLKRDRTRY--IDKNDVFNLYNQLVEQLELIDKRRTS-DK 65
                66789*************9888777765..667889999*************9998.44 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.016
     DUF2408   6 pelepiyekLvsirrsLlslaakskaeeakeseevkeelkelkeeLkkiesk 57 
                 ++l+p+ e+L +ir  +l+ a k++a+           +k lk++L++ +++
  EPX73112.1 120 NDLKPLKERLERIRTAILEGAQKEEAS--------PVVVKYLKNKLEQCDKN 163
                 799******************999998........44555555555555554 PP

  == domain 3  score: 111.8 bits;  conditional E-value: 2.1e-35
     DUF2408   2 eelspelepiyekLvsirrsLlslaakskaeeakeseevkeelkelkeeLkkieskrdeegkFkseegkevvekgqavlngLlddcfdlvedlkaqd.. 98 
                 +++ pel+++ ++Lvsirr++  +a + +++         + +++l+++Lk+ie+ rd++gkF+ ++g   + +gq+++ng+l++cf+++ed k+++  
  EPX73112.1 172 SKIAPELTAVQTRLVSIRRQIDGFAVRPTND--------GDFIDHLMKQLKEIEEMRDSDGKFVDDQG--QPLQGQELCNGILEECFSFLEDAKSKQgl 260
                 799***************************9........89**********************88887..899************************99 PP

     DUF2408  99 geekkvasslqpiYdrLleikttLenLllTrrWtLRE 135
                 ++e+k ++++q+iY rL e+ ++L++L+lT+rWtLRE
  EPX73112.1 261 SDEMKSSPRFQQIYCRLDELLNKLKHLTLTHRWTLRE 297
                 888999******************************9 PP

  == domain 4  score: 27.0 bits;  conditional E-value: 3.3e-09
     DUF2408  44 lkelkeeLkkieskrdeegkFkseegkevvekgqavlngLlddcfdlvedlkaqdgeekkvasslqpiYdrLleikttLen 124
                 l  ++++L +i+s r + g+F  e+g   +++gq++l  Ll++c+  + +l +    ++ v+++l  + ++L ++k+ L++
  EPX73112.1 300 LYVYRASLAEIDSMRSD-GQFLDENG--NAPAGQRILLYLLRRCYAYIYQLLSA---SEPVSEELMTVHNQLRTVKRCLQE 374
                 5568899**********.***66665..9*****************99999999...479****************99976 PP

  == domain 5  score: 34.8 bits;  conditional E-value: 1.3e-11
     DUF2408   4 lspelepiyekLvsirrsLlslaakskaeeakeseevkeelkelkeeLkkieskrdeegkFkseegkevvekgqavlngLlddcfdlvedlkaqdgeek 102
                 +s+el++++++L +++r L ++  +            + +l +++ +L ++e+ r++ g F  +++  + ++gq+++n+Ll +c++l+e+++ ++ +++
  EPX73112.1 354 VSEELMTVHNQLRTVKRCLQEVQRSGGIY-------SERDLYPYQMKLASLEKLRVN-GYFLASDN--SIPEGQELVNSLLTQCHQLIEEIRDEK-HQH 441
                 78999999999999999999988777665.......489******************.***77776..99**********************997.445 PP

     DUF2408 103 kv 104
                 ++
  EPX73112.1 442 DI 443
                 44 PP

>> TelA  Toxic anion resistance protein (TelA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1       1.3     2e+03      42      68 ..      39      65 ..      27      74 .. 0.75
   2 !   17.0   0.0   1.4e-06    0.0023      47     113 ..     119     186 ..     109     198 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1.3
        TelA 42 dlgevgklLseLvkelkeldpdelkee 68
                d+++v +l ++Lv++l+ +d+++ +++
  EPX73112.1 39 DKNDVFNLYNQLVEQLELIDKRRTSDK 65
                778888888999999999998877554 PP

  == domain 2  score: 17.0 bits;  conditional E-value: 1.4e-06
        TelA  47 gklLseLvkelkeldpdelkeekklgllp.lfkkaknkieklfakYekaeeqidkIvkeLekgqdell 113
                  + L+ L+++l+++  + l+  +k +  p ++k +knk+e+  ++Y++a+++i kI+ eL + q++l 
  EPX73112.1 119 QNDLKPLKERLERIRTAILEGAQKEEASPvVVKYLKNKLEQCDKNYSEAQSNISKIAPELTAVQTRLV 186
                 56788899999999999887777768888999******************************999986 PP

>> FH2  Formin Homology 2 Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   2.8e-05     0.045     259     343 ..      93     180 ..      50     192 .. 0.87
   2 ?   -1.7   0.0      0.72   1.2e+03     169     196 ..     351     378 ..     345     381 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2.8e-05
                 GGGGHHHHTTTHHHCCTS-HHH...HHHHHHHHHHHHHHHHHHHHHCCTTSSTT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         FH2 259 evldfsseLknvkkaakvnles...lekevkklekglkklekelessekkeepsdkflevlkeflkeaeeklkkleeelkeakelvke 343
                 ++  f  +L +v+++ +++le     ++++k l+++l+ +++ + ++++kee s  +++ lk  l+++++ +++ +++ +++  ++++
  EPX73112.1  93 DLPAFFVQLGTVRRLLEYSLEGacyTQNDLKPLKERLERIRTAILEGAQKEEASPVVVKYLKNKLEQCDKNYSEAQSNISKIAPELTA 180
                 5666777888888888888886444699**************************************************9998877665 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.72
                 HHTHHHHHHHHHHHHHHHHHHHHHHHH- CS
         FH2 169 kstfeeeveelkrslealeaaseeLkns 196
                  + ++ee+  ++++l+++++  +e+++s
  EPX73112.1 351 SEPVSEELMTVHNQLRTVKRCLQEVQRS 378
                 5567788888899999999999999887 PP

>> Rx_N  Rx N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.1     0.016        26      24      59 ..     119     154 ..     103     158 .. 0.87
   2 ?    3.6   0.0      0.05        81       5      63 ..     149     215 ..     146     217 .. 0.73
   3 ?   -0.2   0.0      0.77   1.3e+03      39      55 ..     249     265 ..     241     296 .. 0.78
   4 ?    1.0   0.0      0.33   5.4e+02      20      46 ..     351     377 ..     335     384 .. 0.74

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.016
        Rx_N  24 keeleklkdeLesiqavLedaeerqikdeavkeWlk 59 
                 +++l+ lk++Le+i+  + +  ++++ ++ v + lk
  EPX73112.1 119 QNDLKPLKERLERIRTAILEGAQKEEASPVVVKYLK 154
                 789**************9999999999888877776 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.05
        Rx_N   5 llqkLadllaeeakllkgvkeeleklkdeLesiqavLedaee.......rqikd.eavkeWlkelrd 63 
                 +++ L ++l++  k   + ++ + k+  eL ++q  L    +       r ++d + +++ +k+l++
  EPX73112.1 149 VVKYLKNKLEQCDKNYSEAQSNISKIAPELTAVQTRLVSIRRqidgfavRPTNDgDFIDHLMKQLKE 215
                 6777999999999888888888888888888888888777665555555555444667778888777 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.77
        Rx_N  39 avLedaeerqikdeavk 55 
                 ++Leda  +q  ++++k
  EPX73112.1 249 SFLEDAKSKQGLSDEMK 265
                 68888888888776665 PP

  == domain 4  score: 1.0 bits;  conditional E-value: 0.33
        Rx_N  20 lkgvkeeleklkdeLesiqavLedaee 46 
                  + v eel   +++L++++ +L+++ +
  EPX73112.1 351 SEPVSEELMTVHNQLRTVKRCLQEVQR 377
                 455777777788888888887777655 PP

>> DUF2203  Uncharacterized conserved protein (DUF2203)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.1   0.00067       1.1      21      92 ..     121     194 ..     106     198 .. 0.87
   2 ?   -0.0   0.0      0.86   1.4e+03      30      72 ..     245     287 ..     237     293 .. 0.83
   3 ?   -0.7   0.0       1.4   2.3e+03      25      45 ..     347     367 ..     331     403 .. 0.55
   4 ?   -1.1   0.0       1.8   2.9e+03       9      29 ..     421     441 ..     411     455 .. 0.59

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00067
     DUF2203  21 elralrkeleeleeeleeakaeaekse..aaeleaeleeleaeieelveeieelGvevkdleaglvDFpakldg 92 
                 +l+ l+++le++++++ e  +++e+s    ++l+++le+ +++++e+ ++i+++  e+  ++  lv    ++dg
  EPX73112.1 121 DLKPLKERLERIRTAILEGAQKEEASPvvVKYLKNKLEQCDKNYSEAQSNISKIAPELTAVQTRLVSIRRQIDG 194
                 566788888888888888888877777999********************************999998888887 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.86
     DUF2203  30 eeleeeleeakaeaekseaaeleaeleeleaeieelveeieel 72 
                 ee+ + le+ak+++  s++++   +++++  +++el++++++l
  EPX73112.1 245 EECFSFLEDAKSKQGLSDEMKSSPRFQQIYCRLDELLNKLKHL 287
                 5566677888888888889999999*********999999876 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 1.4
     DUF2203  25 lrkeleeleeeleeakaeaek 45 
                 l +  e ++eel + +++ ++
  EPX73112.1 347 LLSASEPVSEELMTVHNQLRT 367
                 444444444444443333222 PP

  == domain 4  score: -1.1 bits;  conditional E-value: 1.8
     DUF2203   9 nalLpllkelleelralrkel 29 
                 n+lL++ ++l+ee+r+ +++ 
  EPX73112.1 421 NSLLTQCHQLIEEIRDEKHQH 441
                 555666666666666544433 PP

>> DegS  Sensor protein DegS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.2      0.34   5.5e+02      60     104 ..      23      67 ..      11      82 .. 0.69
   2 ?    9.8   0.1   0.00031      0.51      26      98 ..     119     190 ..     113     202 .. 0.84
   3 ?    0.8   0.0      0.18     3e+02      52      78 ..     360     386 ..     344     392 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.34
        DegS  60 arkrLaeVskdFkkyse.eeikeaYeeakelqvelallrekEkqlr 104
                  r+rLa   +d  +y + +++ + Y++  e q+el+ +r+   ++r
  EPX73112.1  23 IRQRLAVLKRDRTRYIDkNDVFNLYNQLVE-QLELIDKRRTSDKIR 67 
                 578888888888888541577777777654.666766666665555 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00031
        DegS  26 rkeverlkkeleelkeevsevikevdklekkerkarkrLaeVskdFkkyseeeikeaYeeakelqvelallre 98 
                 +++++ lk+ le++++ + e  ++ ++     +  +++L + +k++++  +++i +   e +++q++l+  r+
  EPX73112.1 119 QNDLKPLKERLERIRTAILEGAQKEEASPVVVKYLKNKLEQCDKNYSEA-QSNISKIAPELTAVQTRLVSIRR 190
                 67889999*************************************9875.45566666667777777776665 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.18
        DegS  52 klekkerkarkrLaeVskdFkkyseee 78 
                 +++++ r  ++ L eV+++   yse +
  EPX73112.1 360 TVHNQLRTVKRCLQEVQRSGGIYSERD 386
                 566778888888889988888888887 PP

>> Laminin_II  Laminin Domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.1      0.45   7.3e+02      67      84 ..      46      63 ..      40      73 .. 0.77
   2 ?    0.7   0.0      0.31     5e+02       9      39 ..     112     142 ..     104     155 .. 0.73
   3 ?    8.1   0.2    0.0016       2.6      15      84 ..     153     222 ..     140     230 .. 0.68
   4 ?   -0.4   0.0      0.63     1e+03      19      44 ..     351     376 ..     343     381 .. 0.58

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.45
                TTTTTGGGHHHHHHHHHH CS
  Laminin_II 67 lapqLldklkelkqleea 84
                l +qL+++l+ +++++  
  EPX73112.1 46 LYNQLVEQLELIDKRRTS 63
                6799********999876 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.31
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Laminin_II   9 netakevleqlaplsqnlentkeklseinrs 39 
                 +e a  ++++l+pl+++le+++  + e +++
  EPX73112.1 112 LEGACYTQNDLKPLKERLERIRTAILEGAQK 142
                 5667778999999999999998876555544 PP

  == domain 3  score: 8.1 bits;  conditional E-value: 0.0016
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTTTTGGGHHHHHHHHHH CS
  Laminin_II  15 vleqlaplsqnlentkeklseinrsveetnekvkdankairdArrsvkkLeklapqLldklkelkqleea 84 
                  +++l++ ++n ++ ++++s+i+ ++  ++  + +  ++i+       +    ++ L+++lke+++ ++ 
  EPX73112.1 153 LKNKLEQCDKNYSEAQSNISKIAPELTAVQTRLVSIRRQIDGFAVRPTNDGDFIDHLMKQLKEIEEMRDS 222
                 3345666677777777777777777777777777777777765555556667899999999999998876 PP

  == domain 4  score: -0.4 bits;  conditional E-value: 0.63
                 XXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Laminin_II  19 laplsqnlentkeklseinrsveetn 44 
                  +p+s++l  + ++l +++r ++e++
  EPX73112.1 351 SEPVSEELMTVHNQLRTVKRCLQEVQ 376
                 45555555555555555555555543 PP

>> SKA2  Spindle and kinetochore-associated protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       2.5   4.1e+03      57      78 ..      50      69 ..      41      80 .. 0.58
   2 ?   -2.1   0.0       1.9   3.1e+03      52      65 ..     120     133 ..     116     148 .. 0.58
   3 ?   11.3   0.1   0.00014      0.22      19      67 ..     151     198 ..     144     222 .. 0.78
   4 ?    0.3   0.0      0.36   5.9e+02      38      58 ..     356     376 ..     342     390 .. 0.65
   5 ?   -3.3   0.1       4.7   7.6e+03      54      67 ..     420     433 ..     416     441 .. 0.54

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 2.5
        SKA2 57 Lkeqceellaekkelidkirtt 78
                L eq+e +   k+++ dkir+ 
  EPX73112.1 50 LVEQLELI--DKRRTSDKIRNI 69
                44444433..355555666554 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.9
        SKA2  52 eelqaLkeqceell 65 
                 ++l+ Lke++e + 
  EPX73112.1 120 NDLKPLKERLERIR 133
                 34444444444443 PP

  == domain 3  score: 11.3 bits;  conditional E-value: 0.00014
        SKA2  19 dyvqhrLekefqqsypdnaeNpvkLlerlkkvkeelqaLkeqceellae 67 
                 +y++++Le+   ++y++ + N  k+  +l++v+++l ++++q++  + +
  EPX73112.1 151 KYLKNKLEQ-CDKNYSEAQSNISKIAPELTAVQTRLVSIRRQIDGFAVR 198
                 578888886.6788888889**********************9877665 PP

  == domain 4  score: 0.3 bits;  conditional E-value: 0.36
        SKA2  38 eNpvkLlerlkkvkeelqaLk 58 
                 e++++++++l+ vk+ lq+++
  EPX73112.1 356 EELMTVHNQLRTVKRCLQEVQ 376
                 455666666666665555554 PP

  == domain 5  score: -3.3 bits;  conditional E-value: 4.7
        SKA2  54 lqaLkeqceellae 67 
                 +++L +qc++l +e
  EPX73112.1 420 VNSLLTQCHQLIEE 433
                 44555555555444 PP

>> I_LWEQ  I/LWEQ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.7   0.00016      0.26      85     150 ..     129     191 ..     117     192 .. 0.79
   2 ?   -3.1   0.0       5.2   8.5e+03      66      66 ..     357     357 ..     341     378 .. 0.42
   3 ?   -2.2   0.1       2.7   4.3e+03      79     101 ..     421     443 ..     415     454 .. 0.54

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00016
      I_LWEQ  85 tkelvkavkeakekqeeeeseeeeldisklslvqakrqemeaqvkilklekeLeearkkLaeirka 150
                  +++  a+ e ++k+e +      +++ k +l q  ++  eaq++i k+  eL++ +++L +ir++
  EPX73112.1 129 LERIRTAILEGAQKEEASP---VVVKYLKNKLEQCDKNYSEAQSNISKIAPELTAVQTRLVSIRRQ 191
                 5555555666666655543...357899************************************97 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 5.2
      I_LWEQ  66 k 66 
                 +
  EPX73112.1 357 E 357
                 2 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 2.7
      I_LWEQ  79 kaVkkatkelvkavkeakekqee 101
                 +++ +++++l++ +++ k++++ 
  EPX73112.1 421 NSLLTQCHQLIEEIRDEKHQHDI 443
                 44455566666666655544433 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1       3.2   5.2e+03      60      78 ..      58      77 ..      40      82 .. 0.58
   2 ?   -2.3   0.0       2.7   4.4e+03      71     101 ..     104     134 ..      99     142 .. 0.70
   3 ?    7.2   0.2    0.0031         5      63     104 ..     152     193 ..     117     219 .. 0.67
   4 ?    2.3   0.0       0.1   1.7e+02      40      66 ..     348     374 ..     341     379 .. 0.75
   5 ?   -2.8   0.1       3.9   6.3e+03      43      62 ..     420     439 ..     417     444 .. 0.65

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 3.2
     DUF1664 60 tkrhLssridr.vdkkldeq 78
                 kr+ s++i + vd++l+++
  EPX73112.1 58 DKRRTSDKIRNiVDTQLEDC 77
                35566666655245566655 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 2.7
     DUF1664  71 vdkkldeqkeiskeikeevtevredlseige 101
                 v + l+ + e +  ++++++ ++e l++i++
  EPX73112.1 104 VRRLLEYSLEGACYTQNDLKPLKERLERIRT 134
                 5556666666677778888888888888775 PP

  == domain 3  score: 7.2 bits;  conditional E-value: 0.0031
     DUF1664  63 hLssridrvdkkldeqkeiskeikeevtevredlseigedve 104
                  L++++++ dk+  e +  +++i+ e+t+v+  l +i+++++
  EPX73112.1 152 YLKNKLEQCDKNYSEAQSNISKIAPELTAVQTRLVSIRRQID 193
                 355555555555555555555555555555555555555544 PP

  == domain 4  score: 2.3 bits;  conditional E-value: 0.1
     DUF1664  40 sdavesvskqleqvseslaatkrhLss 66 
                  +a e vs++l +v ++l+++kr L++
  EPX73112.1 348 LSASEPVSEELMTVHNQLRTVKRCLQE 374
                 567777888888888888888887754 PP

  == domain 5  score: -2.8 bits;  conditional E-value: 3.9
     DUF1664  43 vesvskqleqvseslaatkr 62 
                 v+s+ +q  q+ e++++ k+
  EPX73112.1 420 VNSLLTQCHQLIEEIRDEKH 439
                 56666666777777776665 PP

>> Gliadin  Cys-rich Gliadin N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.085   1.4e+02      39      73 ..      37      71 ..      25      74 .. 0.82
   2 ?   -3.4   0.0       8.5   1.4e+04      12      20 ..     154     162 ..     148     184 .. 0.59
   3 ?    6.0   0.5      0.01        16       1      47 [.     230     277 ..     230     279 .. 0.84
   4 ?   -1.3   0.1       1.8   2.9e+03      11      22 ..     420     431 ..     413     445 .. 0.62

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.085
     Gliadin 39 tlqqsscqvmrqQCCqQLrqiaeqsrcqaIhsvve 73
                 + +++  +  +Q   QL +i++    + I+++v+
  EPX73112.1 37 YIDKNDVFNLYNQLVEQLELIDKRRTSDKIRNIVD 71
                5556666677789999*****************97 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 8.5
     Gliadin  12 qqqLnpCke 20 
                 ++ L +C +
  EPX73112.1 154 KNKLEQCDK 162
                 555666632 PP

  == domain 3  score: 6.0 bits;  conditional E-value: 0.01
     Gliadin   1 QqQpsveqqslqqqLnpCkeFllqQcsp.avavpflqsktlqqsscqv 47 
                 Q Qp + q+  + +L  C  Fl    s+   +  ++ s ++qq+ c++
  EPX73112.1 230 QGQPLQGQELCNGILEECFSFLEDAKSKqGLSDEMKSSPRFQQIYCRL 277
                 77999888788************9888856777888899999999975 PP

  == domain 4  score: -1.3 bits;  conditional E-value: 1.8
     Gliadin  11 lqqqLnpCkeFl 22 
                 ++  L++C++ +
  EPX73112.1 420 VNSLLTQCHQLI 431
                 466666665543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (456 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1025  (0.0571699); expected 358.6 (0.02)
Passed bias filter:                      615  (0.034302); expected 358.6 (0.02)
Passed Vit filter:                        73  (0.00407162); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.65u 0.29s 00:00:00.94 Elapsed: 00:00:00.46
# Mc/sec: 2972.15
//
Query:       EPX73113.1  [L=853]
Description: hypothetical protein SOCG_00869 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.6e-05   23.9   0.2      0.003   18.5   0.0    4.4  4  FNIP_N    Folliculin-interacting protein N-terminus
  ------ inclusion threshold ------
        1.2    8.6   6.5       0.25   10.7   0.2    2.9  2  DUF3678   Protein of unknown function (DUF3678)


Domain annotation for each model (and alignments):
>> FNIP_N  Folliculin-interacting protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.1   2.6e-05      0.23       2      28 ..      40      64 ..      39      76 .. 0.80
   2 !   18.5   0.0   3.4e-07     0.003     119     152 ..      74     107 ..      65     109 .. 0.86
   3 ?   -1.1   5.7      0.39   3.5e+03      38      99 ..     181     253 ..     155     299 .. 0.60
   4 ?    0.6   2.8      0.11   9.9e+02      62     128 ..     568     643 ..     523     651 .. 0.42

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 2.6e-05
      FNIP_N  2 vRviimQdalgerrgaslLfDSkavkk 28
                +R +++Qd +g+r ++++LfDSk    
  EPX73113.1 40 FRFVLVQD-IGDR-KKTILFDSKYSDY 64
                799*****.****.*********6544 PP

  == domain 2  score: 18.5 bits;  conditional E-value: 3.4e-07
      FNIP_N 119 eevntlgeciFGssamsYkGsstKvHivpsdsrl 152
                 ++ + l + +FG ++ms k + tK H+++s+s +
  EPX73113.1  74 SSHAPLTDLMFGAIPMSQKNTVTKLHVLQSPSSS 107
                 4556899***********************9875 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 0.39
      FNIP_N  38 askassrqssrhsrkasslsassrrsptsprksslsq.........rplviq..sqprqgaFdrrsslslsss 99 
                 +++ +s++ ++ +rk s ls + + + +s++ ssl +         rp+v +  +++r  +++ rss  +s s
  EPX73113.1 181 SRSVQSEKDEKGTRKESKLSPKRKNNVASTSSSSLLHdqmekllsiRPSVKErpRPSRLTSYSPRSSSPISVS 253
                 3333333344444554444444333344455556555566656556666666744444444666555432222 PP

  == domain 4  score: 0.6 bits;  conditional E-value: 0.11
      FNIP_N  62 rsptsprksslsqrplviq..sqprqgaFdrrssls......lsssrsesaqletekqraar....eyaeevntlgeci 128
                 rs+ s+ + s s++++  +   ++    F r+s +s      +s + s+s+   +++q+++     +y+++  t+g+  
  EPX73113.1 568 RSSKSS-NHSTSHKSSLRNylGSSWRFKFMRSSYQSsptgpeSSGGVSSSS-SRQRQQQHSFgsfsPYSSDF-TFGSDC 643
                 222211.11222222222223222223344433333222222222222222.22233333324555777777.444444 PP

>> DUF3678  Protein of unknown function (DUF3678)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.2   2.8e-05      0.25      13      24 ..     208     219 ..     205     221 .. 0.91
   2 ?   -2.0   1.9      0.27   2.4e+03      10      19 ..     604     619 ..     603     621 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 2.8e-05
     DUF3678  13 astsSfslaHlq 24 
                 astsS+sl+H+q
  EPX73113.1 208 ASTSSSSLLHDQ 219
                 59*********9 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.27
     DUF3678  10 aasa......stsSfs 19 
                 ++++      s+sS++
  EPX73113.1 604 PTGPessggvSSSSSR 619
                 6777777777888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (853 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       863  (0.0481343); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.28s 00:00:00.95 Elapsed: 00:00:00.43
# Mc/sec: 5911.43
//
Query:       EPX73114.1  [L=469]
Description: inheritance GTPase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-35  122.9   0.0    2.3e-35  121.9   0.0    1.5  1  Tubulin_3        Tubulin domain
    5.9e-23   81.4   0.3    2.9e-22   79.2   0.1    2.1  2  Misat_Tub_SegII  Misato Segment II tubulin-like domain


Domain annotation for each model (and alignments):
>> Tubulin_3  Tubulin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.9   0.0   2.6e-39   2.3e-35       2     181 .]     137     314 ..     136     314 .. 0.91

  Alignments for each domain:
  == domain 1  score: 121.9 bits;  conditional E-value: 2.6e-39
   Tubulin_3   2 pkltsetvrywsdfnrvfyhPrsivqlneyelnskllpfedwsvGeeLfeeldkehdlldrdlrpfaeecdqlrglqvftgvddaWGGfaakylerlrd 100
                 p+++  t+++wsdfnr+ ++P+ +  +n+ +lns+  +fe   +G e f+  ++e+++ d  lrp++eecd l+g+q +  v+  W Gf ++yl+ + d
  EPX73114.1 137 PNIQNGTIKHWSDFNRLLFDPKFLHPINNPDLNSEGSSFE---LGAEAFRLHNNEQNVWDDTLRPLIEECDGLQGFQFVVDVNTGWSGFMTSYLQYIED 232
                 778899**********************************...******************************************************** PP

   Tubulin_3 101 eygkksilvWvlaleeklkkkkk..aklerklkklnkarslkelseqaslyvPiaklsdaeseWhtsaLlssalesvtlpsrL 181
                 e     + +W++++++++ ++ +   +  +k   +n++ +l++l+   sly+P++ l++a++ W++s++  +a es+tlp+rL
  EPX73114.1 233 ELQDAGLPTWIFGVKNTEGSSVNplPNHMQKQMYANESLTLASLKDVLSLYTPLS-LNSAHDYWFASSIANMAFESLTLPTRL 314
                 ************99876655443113333444467******************75.677899********************8 PP

>> Misat_Tub_SegII  Misato Segment II tubulin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.2   0.1   3.2e-26   2.9e-22       1     117 [.       2     113 ..       2     114 .. 0.87
   2 ?   -0.4   0.0      0.15   1.4e+03      31      49 ..     347     365 ..     340     435 .. 0.75

  Alignments for each domain:
  == domain 1  score: 79.2 bits;  conditional E-value: 3.2e-26
  Misat_Tub_SegII   1 rEivtlqlGnyaNyvgtHfWNtQesyftydeeeeesevdhdvlfreget.kqgqvtytPRllivDlkgslgslrkegelyeekeeeeseeseaa 93 
                      rEi++l++G+++N++ tHfWNtQe+yf+yde+e+ s+v  +++fr+  + ++++   +PR +++D+ +++g +rk  +l e    e+++  +  
       EPX73114.1   2 REILSLSFGSKSNFLLTHFWNTQEAYFVYDEKES-SKVSVNTNFRQLTKhNREHLATVPRECVYDFTDEFGFVRKP-WLAE----ERESDIATP 89 
                      8*********************************.9**********877469999*******************95.5555....244444445 PP

  Misat_Tub_SegII  94 twdgklevqkqepvekseyqksLd 117
                      + +g++e +++ p + ++yq++L+
       EPX73114.1  90 SFSGSVEKIHKAPLDIHPYQSALW 113
                      56779999999*********9997 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.15
  Misat_Tub_SegII  31 eeeeesevdhdvlfreget 49 
                      +e++e++++++v+f +   
       EPX73114.1 347 HEKNEWQINQNVSFVNETP 365
                      3333489999999987554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (469 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       537  (0.0299515); expected 358.6 (0.02)
Passed bias filter:                      366  (0.0204139); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 3618.12
//
Query:       EPX73115.1  [L=137]
Description: cornichon family protein Erv14 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.5e-45  152.6  11.7    6.3e-45  152.4  11.7    1.0  1  Cornichon   Cornichon protein
  ------ inclusion threshold ------
       0.02   14.5   0.0      0.027   14.1   0.0    1.2  1  HrpB1_HrpK  Bacterial type III secretion protein (HrpB1_HrpK)


Domain annotation for each model (and alignments):
>> Cornichon  Cornichon protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.4  11.7     7e-49   6.3e-45       2     122 .]       7     127 ..       6     127 .. 0.99

  Alignments for each domain:
  == domain 1  score: 152.4 bits;  conditional E-value: 7e-49
   Cornichon   2 llfilaliltaallflsvyfiialsDleadyinpidlcsklNplvlpelilhafltllfllsgewilfllnlpllayniyrvmskqglydpteifnqlk 100
                 +++i++l+l++a++++++yfii++sDle+dyinpidlc+klN++++pe++ h+++tll+ll+g+wil+lln+pl++++++++++k++++d+teif+ql 
  EPX73115.1   7 FSYIASLLLNGANMLMQIYFIIMFSDLEMDYINPIDLCNKLNQYIIPEILTHTAMTLLLLLAGKWILVLLNIPLVVFHVNQIIHKTHVLDATEIFRQLG 105
                 78************************************************************************************************* PP

   Cornichon 101 khkkesmiklafylllffiyLY 122
                 +hk+ ++ k  f l++ff++LY
  EPX73115.1 106 RHKRVTFTKALFALVMFFTLLY 127
                 *********************9 PP

>> HrpB1_HrpK  Bacterial type III secretion protein (HrpB1_HrpK)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0     3e-06     0.027      48      90 ..      81     122 ..      62     124 .. 0.91

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 3e-06
  HrpB1_HrpK  48 dllegvlliergrweeAlrlLreveaeasgtpyakaLlAlcLa 90 
                  ++ +++ i++ ++ +A  ++r++  ++++  + kaL+Al+++
  EPX73115.1  81 VVFHVNQIIHKTHVLDATEIFRQLG-RHKRVTFTKALFALVMF 122
                 578999******************9.999999********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       673  (0.037537); expected 358.6 (0.02)
Passed bias filter:                      225  (0.0125495); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.20s 00:00:00.58 Elapsed: 00:00:00.36
# Mc/sec: 1143.77
//
Query:       EPX73116.1  [L=423]
Description: cofactor for methionyl-and glutamyl-tRNA synthetase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-25   89.5   0.1    2.8e-25   88.2   0.1    1.7  1  tRNA_bind      Putative tRNA binding domain
     0.0044   17.4   2.9     0.0067   16.7   2.9    1.3  1  GAGA_bind      GAGA binding protein-like family
  ------ inclusion threshold ------
       0.02   13.8   0.4      0.031   13.1   0.4    1.3  1  FAM91_C        FAM91 C-terminus
      0.045   12.7   1.4      0.068   12.1   1.4    1.2  1  DUF913         Domain of Unknown Function (DUF913)
       0.47    9.3  12.0       0.68    8.8  12.0    1.1  1  NARP1          NMDA receptor-regulated protein 1
          1    9.8  10.4        1.8    9.0  10.4    1.3  1  RNA_pol_Rpc4   RNA polymerase III RPC4
        2.3    8.0  12.1        3.9    7.2  12.1    1.3  1  RR_TM4-6       Ryanodine Receptor TM 4-6


Domain annotation for each model (and alignments):
>> tRNA_bind  Putative tRNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.2   0.1   1.1e-28   2.8e-25       1      95 [.     257     352 ..     257     353 .. 0.98

  Alignments for each domain:
  == domain 1  score: 88.2 bits;  conditional E-value: 1.1e-28
                 EEEEEEEEEEEETTSSTEEEEEEEESSSS.EEEEEESCTTTSTHHHHTTEEEEEETTSESEEETTEEESSEE-EEECCESSCEEEEEESST--TTC CS
   tRNA_bind   1 lrvGkvleaeehpnadkLlvlkvdvGeee.prqivsgaknvyepeelvakkvvvvanlkpkklrGveSeGMilsaeeldekevgilelpadveaGe 95 
                 lrvG + +a +hpnad+L+v ++  G++e pr+++sg++++ + e+++++kvvvvanlkp ++r v+S++M+l+a++ d++ v+++ +p+ +eaG+
  EPX73116.1 257 LRVGFIEKAVKHPNADSLYVSTIHCGDAEgPRTVCSGLVKYIPLEQMQQRKVVVVANLKPVNMRSVKSQAMVLCASSPDHSVVEFVLPPEGAEAGD 352
                 79**************************************************************************999999************97 PP

>> GAGA_bind  GAGA binding protein-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   2.9   2.6e-06    0.0067      97     208 ..     178     292 ..      77     296 .. 0.47

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 2.6e-06
   GAGA_bind  97 alaalqmlrp....lesqlqeaeapelekeevasselveesavvekeeaakkrqqgkrpkepkakkakkaar.kpkeegedl..alkka.......krs 181
                 ++ ++q   p    +++++ + e ++++k e++++ ++ ++++    eaakk +q+k++k+ k++k+ k ++ +pk e   +  +           +++
  EPX73116.1 178 NAPKIQR--PtvakKDKKEAKGEDKQNKKGEKTAQ-KLSSAEI----EAAKKEKQKKKEKTDKKEKKDKPPKeAPKVEAP-VpsM---IdlrvgfiEKA 265
                 2222222..21111222222223223333333322.2222222....333333333333333333333322202332222.1122...12234454333 PP

   GAGA_bind 182 ksekksvdlvingielDestiPipvCs 208
                  ++ ++  l +  i+   ++ P  vCs
  EPX73116.1 266 VKHPNADSLYVSTIHCGDAEGPRTVCS 292
                 333344558899999999999999998 PP

>> FAM91_C  FAM91 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.4   1.2e-05     0.031     189     324 ..      77     222 ..      60     309 .. 0.62

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.2e-05
     FAM91_C 189 elerllvttwghdp.gvveasnvLlllNdaltssavlvQavevkkeeekelevavpfplse.eeekkevssenlaehkaikklskaldLknslGyitll 285
                 ++e+ +++ w   + + v++++++ +lN+ l++ + + Q  +++  + + + v +   +s  + ++ ++ ++ ++   +i++ +++++  +s+G   + 
  EPX73116.1  77 DFEKAQIFEWTTKAfSSVNSQELVETLNESLVNTTFITQDAGITLADLTMY-VRLHSVISGlSAKEGYKLNNVVRWFDFIQHQEDVMETAKSIGLELVA 174
                 57899999998765278*************************999876632.22222233203333566677788899999999999999999975554 PP

     FAM91_C 286 kteskvekeekkekeesekseaeltsessvkeeeekke..........d 324
                    +  + ++ + +++++k+ a+ + +++ k+e++ ++          +
  EPX73116.1 175 VDLNAPKIQRPTVAKKDKKE-AKGEDKQNKKGEKTAQKlssaeieaakK 222
                 44443333333222222222.2222222222221111122323333221 PP

>> DUF913  Domain of Unknown Function (DUF913)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.4   2.6e-05     0.068     267     348 ..     187     276 ..     149     286 .. 0.50

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.6e-05
      DUF913 267 sasskseasssssssetkeeek.......ssededvemeda.....eeetesesdeseeseeekekns......lldyilnvakFLeallsnnslcreF 347
                 +a++++++++ + ++++k+e++       +     +e +++     +e+t+++++++++++e     +      + ++i+  + F+e+ +++ +  + +
  EPX73116.1 187 VAKKDKKEAKGEDKQNKKGEKTaqklssaE-----IEAAKKekqkkKEKTDKKEKKDKPPKE-----ApkveapVPSMIDLRVGFIEKAVKHPNADSLY 275
                 333333333333333333333334332221.....222222111112222222222222222.....1345556*************999998866655 PP

      DUF913 348 v 348
                 v
  EPX73116.1 276 V 276
                 5 PP

>> NARP1  NMDA receptor-regulated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8  12.0   0.00027      0.68     360     457 ..     149     245 ..     146     268 .. 0.50

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00027
                 HHHHCTTT-SHHHHHHHHHHHHHHHHHHH-TTGGG---HHHHHT-S-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--.......------------- CS
       NARP1 360 lrledelrshpfyvkaakgaievYlkledkpkakeeekeeaksaelseaerkklrkkakkaekkaekeeaekaekekekkaaekkakkedeeakkede 457
                 +r+ d +++++  ++ ak+ i + l   d    k +  + ak+ + +++ + k +kk  k ++k+  +e e+a+kek+kk++++++k++++++ ke++
  EPX73116.1 149 VRWFDFIQHQEDVMETAKS-IGLELVAVDLNAPKIQRPTVAKKDKKEAKGEDKQNKKGEKTAQKLSSAEIEAAKKEKQKKKEKTDKKEKKDKPPKEAP 245
                 7888888888888887763.444444444433333333333334444444444445555555555444444444444444333344444333333333 PP

>> RNA_pol_Rpc4  RNA polymerase III RPC4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0  10.4   0.00069       1.8      21      78 ..     189     246 ..     172     266 .. 0.40

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00069
  RNA_pol_Rpc4  21 vsaaeddkseaesqsaekakaeeeskaekasgaeaeekkskkksskkkkkkkskalkl 78 
                   ++ +++ k e++++++++++a++ s+ae + ++++++kk++k+++k+kk+k+ k++++
    EPX73116.1 189 KKDKKEAKGEDKQNKKGEKTAQKLSSAEIEAAKKEKQKKKEKTDKKEKKDKPPKEAPK 246
                   2222222222222222222222222222222222233333333333333333222222 PP

>> RR_TM4-6  Ryanodine Receptor TM 4-6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2  12.1    0.0015       3.9      78     139 ..     178     239 ..     152     256 .. 0.49

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0015
                 XXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXX..........XX CS
    RR_TM4-6  78 aeespt.pelkkklaeeeeaeeekeeeeepeaeaeekadaengekeekekekeeeekeseeee 139
                  + + + p++ kk ++e + e++++++ e++a++  +a+ e  +ke+++k++++++ke++ ++
  EPX73116.1 178 NAPKIQrPTVAKKDKKEAKGEDKQNKKGEKTAQKLSSAEIEAAKKEKQKKKEKTDKKEKK-DK 239
                 333333466666666555666666666666666655555444444443333111111111.11 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (423 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2596  (0.144793); expected 358.6 (0.02)
Passed bias filter:                     1082  (0.0603492); expected 358.6 (0.02)
Passed Vit filter:                       185  (0.0103185); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.73u 0.27s 00:00:01.00 Elapsed: 00:00:00.40
# Mc/sec: 3140.63
//
Query:       EPX73117.1  [L=207]
Description: hypothetical protein SOCG_00873 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     0.0033   17.5   0.0     0.0063   16.6   0.0    1.5  1  Ribonuclease_P  Ribonuclease P


Domain annotation for each model (and alignments):
>> Ribonuclease_P  Ribonuclease P
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   3.5e-07    0.0063      23     106 ..      54     169 ..      31     172 .. 0.66

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 3.5e-07
  Ribonuclease_P  23 vaskdlvlyalk...........nsleks............slrlGlsvskk.vgk.AvvRNrikRllReafrlnkdelpa.........gldlv 83 
                     ++s+++++y+ +           n   ++             +rl +   kk v k Av R +  R+lR+af   +d l +          +d++
      EPX73117.1  54 ARSNYMTFYCIPrvwlfsfiedlN---SKpfryptlhystsPIRLSIRAGKKgVHKsAVIRSQSTRRLRQAFIDVLDALHHsghrclpdePVDVI 145
                     455555666555444444443331...11233444555555699999999984666*********************999888888888878888 PP

  Ribonuclease_P  84 viakkg.aaeadfaelekelekll 106
                     v   +g ++++++++l  ++++ +
      EPX73117.1 146 VDTYNGgTKDISYENLFYDVQRSW 169
                     866544266788877777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       501  (0.0279436); expected 358.6 (0.02)
Passed bias filter:                      452  (0.0252106); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.36s 00:00:00.97 Elapsed: 00:00:00.58
# Mc/sec: 1083.76
//
Query:       EPX73118.1  [L=318]
Description: deoxyhypusine hydroxylase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-29  101.4   0.0    8.1e-10   39.0   0.0    4.3  4  HEAT_2    HEAT repeats
      4e-27   92.1   0.0    0.00017   21.9   0.0    8.0  9  HEAT_PBS  PBS lyase HEAT-like repeat
    8.1e-09   35.0   0.1        2.4    8.6   0.0    5.9  6  HEAT      HEAT repeat
    0.00097   19.6   0.1        4.1    8.0   0.0    3.7  4  HEAT_EZ   HEAT-like repeat


Domain annotation for each model (and alignments):
>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   2.4e-08   0.00011      16      74 ..      29      90 ..      11      95 .. 0.85
   2 !   39.0   0.0   1.8e-13   8.1e-10      11      87 ..      58     136 ..      55     137 .. 0.93
   3 !   25.9   0.0   2.1e-09   9.5e-06      16      80 ..     194     259 ..     179     259 .. 0.91
   4 !   30.3   0.1   9.3e-11   4.2e-07       1      62 [.     242     304 ..     242     308 .. 0.90

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 2.4e-08
      HEAT_2 16 vrraairaLg...rignpealpaLvellededpavRraaaeaLgaigdpealpaLkellddd 74
                 r++a+ +L    ++g+++a++a+ ++  de++   ++ a  Lg+ g++ a++ L++++ d+
  EPX73118.1 29 FRYRALFSLNhlsQKGDKRAIDAIYNAFGDESELLKHEMAYVLGQSGLEYAIDPLTKIVEDP 90
                588888888888799******************************************99875 PP

  == domain 2  score: 39.0 bits;  conditional E-value: 1.8e-13
      HEAT_2  11 dpdpevrraairaLgrignpealpaLvelled..edpavRraaaeaLgaigdpealpaLkellddddddvvReaAaeaL 87 
                 d+++ ++++ + +Lg+ g + a++ L++++ed  +  +vR++aaeaLga+g  ++lp+L++++++d+ + +Re  + a+
  EPX73118.1  58 DESELLKHEMAYVLGQSGLEYAIDPLTKIVEDpgQQVMVRHEAAEALGALGFTKSLPVLEKYYKNDPLAPIRETCELAI 136
                 8999****************************444679***********************************998887 PP

  == domain 3  score: 25.9 bits;  conditional E-value: 2.1e-09
      HEAT_2  16 vrraairaLgrignpealpaLvellededpavRraaaeaLgaigdpealpaLkellddddd.dvvR 80 
                  r++a   L +ig++ea++aLve  ed+++  R+++a   g++ dp ++paL e l ++++ d vR
  EPX73118.1 194 HRYRAMFRLRNIGTKEAIAALVEGFEDPSALFRHEIAFVFGQMVDPHSVPALIEVLENTQEvDMVR 259
                 599*****************************************************9998656666 PP

  == domain 4  score: 30.3 bits;  conditional E-value: 9.3e-11
      HEAT_2   1 ldaLlqalendpdpe.vrraairaLgrignpealpaLvellededpavRraaaeaLgaigdpe 62 
                 ++aL+++len  + + vr++a++aLg i+++e+lp L ++ +d+ p v +  a aL  i++++
  EPX73118.1 242 VPALIEVLENTQEVDmVRHEAAEALGGIATEECLPVLEKYSKDSVPVVAESCAVALDMIKHEQ 304
                 689*****997777669***************************************9999876 PP

>> HEAT_PBS  PBS lyase HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.52   2.3e+03      14      26 ..       7      19 ..       4      20 .. 0.85
   2 !    5.4   0.0     0.008        36       2      25 ..      30      56 ..      29      58 .. 0.76
   3 !    7.2   0.0    0.0021       9.5       3      26 ..      65      88 ..      63      89 .. 0.86
   4 !   15.4   0.0   4.8e-06     0.022       1      23 [.      96     118 ..      96     122 .. 0.90
   5 ?   -2.0   0.0         2   8.9e+03       8      19 ..     135     146 ..     134     147 .. 0.79
   6 !   16.2   0.0   2.7e-06     0.012       2      27 .]     195     220 ..     195     220 .. 0.95
   7 !   14.1   0.0   1.2e-05     0.056       2      27 .]     226     251 ..     225     251 .. 0.95
   8 !   21.9   0.0   3.8e-08   0.00017       1      27 []     258     284 ..     258     284 .. 0.94
   9 ?   -1.3   0.0       1.2   5.5e+03       2      18 ..     290     306 ..     289     308 .. 0.80

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.52
                SGGGHHHHHHHCT CS
    HEAT_PBS 14 deeaipaLleaLq 26
                d+++i+ L ++L 
  EPX73118.1  7 DQRVIDELERVLV 19
                799******9996 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.008
                HHHHHHHHHHCTS...GGGHHHHHHHC CS
    HEAT_PBS  2 RraAakaLgqlgd...eeaipaLleaL 25
                R++A+++L  l     ++ai+a+ +a 
  EPX73118.1 30 RYRALFSLNHLSQkgdKRAIDAIYNAF 56
                6777777777777777******98876 PP

  == domain 3  score: 7.2 bits;  conditional E-value: 0.0021
                HHHHHHHHHCTSGGGHHHHHHHCT CS
    HEAT_PBS  3 raAakaLgqlgdeeaipaLleaLq 26
                ++ a+ Lgq g e ai++L +  +
  EPX73118.1 65 HEMAYVLGQSGLEYAIDPLTKIVE 88
                67799**************98766 PP

  == domain 4  score: 15.4 bits;  conditional E-value: 4.8e-06
                 HHHHHHHHHHHCTSGGGHHHHHH CS
    HEAT_PBS   1 vRraAakaLgqlgdeeaipaLle 23 
                 vR++Aa+aLg+lg + ++p+L +
  EPX73118.1  96 VRHEAAEALGALGFTKSLPVLEK 118
                 9*****************99987 PP

  == domain 5  score: -2.0 bits;  conditional E-value: 2
                 HHHHCTSGGGHH CS
    HEAT_PBS   8 aLgqlgdeeaip 19 
                 a+++++++  ++
  EPX73118.1 135 AIARIQWKNGLD 146
                 899999987665 PP

  == domain 6  score: 16.2 bits;  conditional E-value: 2.7e-06
                 HHHHHHHHHHCTSGGGHHHHHHHCTC CS
    HEAT_PBS   2 RraAakaLgqlgdeeaipaLleaLqd 27 
                 R++A++ L ++g++eai+aL+e  +d
  EPX73118.1 195 RYRAMFRLRNIGTKEAIAALVEGFED 220
                 9********************98876 PP

  == domain 7  score: 14.1 bits;  conditional E-value: 1.2e-05
                 HHHHHHHHHHCTSGGGHHHHHHHCTC CS
    HEAT_PBS   2 RraAakaLgqlgdeeaipaLleaLqd 27 
                 R++ a+  gq+ d+ ++paL+e+L++
  EPX73118.1 226 RHEIAFVFGQMVDPHSVPALIEVLEN 251
                 99**********************85 PP

  == domain 8  score: 21.9 bits;  conditional E-value: 3.8e-08
                 HHHHHHHHHHHCTSGGGHHHHHHHCTC CS
    HEAT_PBS   1 vRraAakaLgqlgdeeaipaLleaLqd 27 
                 vR++Aa+aLg + +ee++p+L +  +d
  EPX73118.1 258 VRHEAAEALGGIATEECLPVLEKYSKD 284
                 9********************998776 PP

  == domain 9  score: -1.3 bits;  conditional E-value: 1.2
                 HHHHHHHHHHCTSGGGH CS
    HEAT_PBS   2 RraAakaLgqlgdeeai 18 
                   ++a aL  +++e++ 
  EPX73118.1 290 AESCAVALDMIKHEQSG 306
                 568999**999998876 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       1.5   6.7e+03      17      29 ..      30      42 ..      28      43 .. 0.86
   2 !    6.1   0.0    0.0035        16      14      27 ..      94     107 ..      80     109 .. 0.82
   3 ?    2.7   0.0     0.042   1.9e+02       2      27 ..     113     139 ..     113     140 .. 0.89
   4 ?    2.4   0.0     0.053   2.4e+02       4      28 ..     213     237 ..     210     238 .. 0.89
   5 !    8.6   0.0   0.00055       2.4       3      28 ..     243     270 ..     242     272 .. 0.81
   6 !    6.7   0.1    0.0022        10       2      25 ..     275     298 ..     274     300 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 1.5
                HHHHHHHHHHHHH CS
        HEAT 17 ReaAakaLgalae 29
                R+ A+ +L +l++
  EPX73118.1 30 RYRALFSLNHLSQ 42
                8999999999986 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0035
                 HHHHHHHHHHHHHH CS
        HEAT  14 peVReaAakaLgal 27 
                   VR  Aa+aLgal
  EPX73118.1  94 VMVRHEAAEALGAL 107
                 68**********98 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.042
                 HHHHHHHH.T-SSHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkll.sDpspeVReaAakaLgal 27 
                 lP+l k   +Dp + +Re++ +a++++
  EPX73118.1 113 LPVLEKYYkNDPLAPIRETCELAIARI 139
                 799999988***********9999887 PP

  == domain 4  score: 2.4 bits;  conditional E-value: 0.053
                 HHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAakaLgala 28 
                 +l++  +Dps+  R   a  +g+++
  EPX73118.1 213 ALVEGFEDPSALFRHEIAFVFGQMV 237
                 688999****************997 PP

  == domain 5  score: 8.6 bits;  conditional E-value: 0.00055
                 HHHHHHHT-..SSHHHHHHHHHHHHHHH CS
        HEAT   3 PlllkllsD..pspeVReaAakaLgala 28 
                 P+l++ l+   +   VR  Aa+aLg +a
  EPX73118.1 243 PALIEVLENtqEVDMVRHEAAEALGGIA 270
                 777777766668889**********998 PP

  == domain 6  score: 6.7 bits;  conditional E-value: 0.0022
                 HHHHHHHHT-SSHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLg 25 
                 lP+l k  +D+ p V e++a aL 
  EPX73118.1 275 LPVLEKYSKDSVPVVAESCAVALD 298
                 8*******************9985 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.0   0.0    0.0009       4.1      23      55 .]      73     107 ..      50     107 .. 0.80
   2 ?    1.3   0.0      0.11   5.1e+02      27      54 ..     208     235 ..     206     236 .. 0.78
   3 !    5.1   0.0    0.0074        33      30      53 ..     242     267 ..     226     269 .. 0.70
   4 ?    4.2   0.0     0.014        64       2      23 ..     257     279 ..     256     297 .. 0.69

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0009
     HEAT_EZ  23 qplvpeilpaLlalLnddsd..eVRaaAagaLgnl 55 
                 q  ++ ++++L +  +d+ +  +VR  Aa aLg+l
  EPX73118.1  73 QSGLEYAIDPLTKIVEDPGQqvMVRHEAAEALGAL 107
                 556788999***********5555*********87 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.11
     HEAT_EZ  27 peilpaLlalLnddsdeVRaaAagaLgn 54 
                 +e+++aL+ + +d+s++ R   a  +g+
  EPX73118.1 208 KEAIAALVEGFEDPSALFRHEIAFVFGQ 235
                 5889999999999998877777776666 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.0074
     HEAT_EZ  30 lpaLlalLnd..dsdeVRaaAagaLg 53 
                 +paL+  L++  + d+VR  Aa aLg
  EPX73118.1 242 VPALIEVLENtqEVDMVRHEAAEALG 267
                 55555555552244488999999998 PP

  == domain 4  score: 4.2 bits;  conditional E-value: 0.014
     HEAT_EZ   2 rvRraAawaLGr.laggepellq 23 
                  vR+ Aa aLG  + +++ + l+
  EPX73118.1 257 MVRHEAAEALGGiATEECLPVLE 279
                 79********9644444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (318 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       510  (0.0284455); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.65u 0.32s 00:00:00.97 Elapsed: 00:00:00.53
# Mc/sec: 1797.68
//
Query:       EPX73119.1  [L=4241]
Description: dynein heavy chain Dhc1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      1e-94  317.2   0.4    5.4e-94  314.8   0.0    2.4  2  AAA_6           Hydrolytic ATP binding site of dynein motor r
    7.1e-69  232.9  18.7    7.1e-69  232.9  18.7    3.8  4  DHC_N1          Dynein heavy chain, N-terminal region 1
    8.7e-60  202.9   5.8    8.7e-60  202.9   5.8    4.5  4  DHC_N2          Dynein heavy chain, N-terminal region 2
    6.6e-29  100.7   0.0    1.5e-24   86.5   0.0    3.6  3  AAA_7           P-loop containing dynein motor region
    1.2e-27   96.5   1.8    1.2e-27   96.5   1.8    3.8  2  AAA_9           ATP-binding dynein motor region
    1.2e-24   86.9   0.0    2.2e-12   47.2   0.0    5.3  4  AAA_5           AAA domain (dynein-related subfamily)
    4.4e-22   78.6   5.5    8.4e-22   77.7   5.5    1.4  1  MT              Microtubule-binding stalk of dynein motor
    1.7e-14   54.0   3.1    2.3e-13   50.3   0.0    3.8  3  Dynein_heavy    Dynein heavy chain region D6 P-loop domain
    3.2e-13   49.6   0.8      1e-12   48.0   0.2    2.3  2  AAA_8           P-loop containing dynein motor region D4
    5.2e-11   43.0   0.0     0.0011   19.2   0.0    4.9  3  AAA_22          AAA domain
    1.3e-09   38.6   0.0      0.073   13.5   0.0    4.3  3  AAA             ATPase family associated with various cellula
    1.2e-07   32.3   0.0       0.59   10.5   0.0    5.1  4  AAA_16          AAA ATPase domain
    4.4e-06   26.6   0.8        2.8    7.6   0.0    4.6  4  AAA_24          AAA domain
      3e-05   23.9   0.0    0.00012   22.0   0.0    2.0  1  AAA_lid_11      Dynein heavy chain AAA lid domain
    0.00013   22.3   0.0       0.74   10.2   0.0    4.2  3  RNA_helicase    RNA helicase
    0.00037   20.7   0.0          4    7.6   0.0    3.6  3  AAA_33          AAA domain
     0.0029   17.5   0.3        4.4    7.2   0.0    4.0  3  Microtub_bd     Microtubule binding
     0.0039   17.3   2.0     0.0061   16.6   0.2    2.3  1  Dynein_AAA_lid  Dynein heavy chain AAA lid domain
     0.0072   16.7   0.0         42    4.4   0.0    4.0  3  AAA_19          AAA domain
  ------ inclusion threshold ------
       0.01   16.4   0.1         38    4.8   0.0    4.2  3  AAA_18          AAA domain
      0.047   13.5   4.4         15    5.2   0.0    3.8  3  AAA_11          AAA domain
      0.051   13.2   0.1        1.7    8.2   0.0    2.7  2  cobW            CobW/HypB/UreG, nucleotide-binding domain
      0.067   12.6   0.8         10    5.4   0.0    2.7  3  Mg_chelatase    Magnesium chelatase, subunit ChlI
       0.14   12.2   0.0         14    5.7   0.0    3.3  2  CbiA            CobQ/CobB/MinD/ParA nucleotide binding domain
       0.16   11.7   0.1         20    4.8   0.6    3.0  3  AAA_30          AAA domain
       0.17   11.4   0.0        1.1    8.8   0.0    2.2  2  AAA_25          AAA domain
        1.1    8.9  24.3        0.2   11.3  14.1    3.0  2  Lebercilin      Ciliary protein causing Leber congenital amau
        4.7    6.6  14.9       0.38   10.2   7.2    2.4  2  LRRFIP          LRRFIP family


Domain annotation for each model (and alignments):
>> AAA_6  Hydrolytic ATP binding site of dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  314.8   0.0   8.4e-97   5.4e-94       1     327 []    1910    2242 ..    1910    2242 .. 0.95
   2 ?   -1.2   0.1       1.2   7.8e+02     197     268 ..    3769    3843 ..    3750    3852 .. 0.68

  Alignments for each domain:
  == domain 1  score: 314.8 bits;  conditional E-value: 8.4e-97
       AAA_6    1 YgyeYlgnserLviTpltdrcyltltqAlklklggapaGpagtGKtEtvkdLakalakqvvvfncsdqldykslgkifkGlaqsGaWgCfdeFnrie 97  
                  Y++ Y+++++  v T lt   + tl++A++l +ggap+GpagtGKtEtvk L+  l+++v+vfnc+++++yk + +i+ Gl+q G+++CfdeFnr++
  EPX73119.1 1910 YAFHYVQIESPFVYTELTRETFSTLIHAIQLGFGGAPSGPAGTGKTETVKALGAYLGRYVFVFNCDESFNYKVIRRILIGLCQLGVYACFDEFNRLN 2006
                  999********************************************************************************************** PP

       AAA_6   98 levLSvvaqqiktiqqalkekkkk.fvfegkeiklnksvgifitmnpgyagrteLPdnLkalfRpvammvPdlelIaeimLfseGfkeakelakklv 193 
                     LS v+q i+ iq+ +k+++k  + ++++ ik ++s++ifit+np+y+gr+eLP nLk lfR+v m +Pd   I+++ L+s+Gf+++++la+ l+
  EPX73119.1 2007 PGTLSTVSQDIQLIQTNCKRSSKPlIPINNQFIKADRSFCIFITLNPSYQGRSELPCNLKRLFRTVWMETPDAFQICQVLLYSNGFNNSSDLANVLT 2103
                  ***************998877665167899******************************************************************* PP

       AAA_6  194 tlykllseqlskqdhydfglralksvlkaagelkreepeesee....elllralrdvnlpklvaeDvplfkglisdlFpgvelpesdyeeleeaiee 286 
                  +++k + +q+s+  +ydfglr++ +++k+  ++  ++  e+e+      ++ra++ v lp+l  +Dv+ f+gl +++F+++ ++ ++ +++++ +e 
  EPX73119.1 2104 SFFKDCAKQFSQVPYYDFGLRTIRAIIKVSCNFGNTNLLENEScgdlGFIYRAIQTVILPRLNVKDVKAFDGLRRKYFKSILTEGTELNTVNASLEV 2200
                  *****************************99997776555554221269********************************99************** PP

       AAA_6  287 vlkekklqle.ekfvekviqlyetlkvrhgvmlvGetgsgKt 327 
                  +lk+++l++  + +++kviql+++ +v +g+++ G++gsgKt
  EPX73119.1 2201 ALKDSNLTSDlTYLTQKVIQLHQLSEVYNGIIIYGSSGSGKT 2242
                  ******765427889**************************8 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 1.2
       AAA_6  197 kllseqlskqdhydfglralks....vlkaagelkreepe.eseeelllralrdvnlpklvaeDvplfkglisd.lFp 268 
                  k++s+   k++ yd +++ + s    +l ++ +l +++ + ++  +l ++++++v +  l+ eD +lf+ lis  lF 
  EPX73119.1 3769 KMMSK---KNSRYDTSMKFFASlysqLLLQVNSLNKNTLRpKNLFSLTMKVITEVCCLSLLPEDRSLFALLISTcLFH 3843
                  44333...4556777776555411124666777766655425567899*********************999752554 PP

>> DHC_N1  Dynein heavy chain, N-terminal region 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  232.9  18.7   1.1e-71   7.1e-69       1     556 [.     312     870 ..     312     874 .. 0.90
   2 ?    3.5   0.1     0.035        22     321     403 ..    1309    1397 ..    1190    1440 .. 0.69
   3 ?   -1.6   0.2       1.2   7.8e+02     147     189 ..    1543    1594 ..    1505    1614 .. 0.63
   4 ?   -0.9   0.2      0.76   4.9e+02     255     300 ..    3390    3458 ..    3271    3466 .. 0.64

  Alignments for each domain:
  == domain 1  score: 232.9 bits;  conditional E-value: 1.1e-71
      DHC_N1   1 vnaleslvieWikqIkevlkedsdgrkegplaEieFWrsreanLssieeqlkspevkkvlkvLkaakssyleafkaldtelkkaleeAkdnvkyLktLe 99 
                 +n+l  +v +Wi++I+++++++++ +++++++Ei FW s + + + +++ql+s  vk +l+vL+ ak+  ++a     t+l  +++ A+ +  +L ++ 
  EPX73119.1 312 LNSLNVTVHSWINSINKLVETSQTKEQGSASQEIRFWHSLCLSYNEVYKQLTSLPVKYTLEVLNFAKRFHTTASFLNNTNLRTQSDIANRVASFLVDI- 409
                 689999**************************************************************4444444449********************. PP

      DHC_N1 100 kpledLest.dleeikellpsllnairliwkiSryYntperivsLlekisnqlieqckkylnpeelfgqeveeaikklkeaielleawkeeyeektrek 197
                  pl +++ + +l++++e+++ + +   + wk S  Y + +r +++l+ ++ ++ ++++++l  + l+    +++ ++l+ a++ l +w+++ + +    
  EPX73119.1 410 -PLSSIQGAsSLDSLHEAITLVHTYFMKRWKTS-SY-PLSRTITFLNCLADDFLSKLTEILGSDYLLAMSFADFQHNLSIALNALTTWDSSNK-EFLLL 504
                 .*******77****************999****.**.9************************8888854778*******************94.77756 PP

      DHC_N1 198 leespkekpwefdeksiFarldafleRlekllelfetieqfsklekv.ggtkgkelegqieeile.efeeaveklksksydvLdvsaee...feadfke 291
                 ++ + ++++   ++ ++ ++ + f++Rl  +l l++t e+++    + ++t  + +e  ++++ + +f + ++ ++  +++vLd+++ +   ++   ++
  EPX73119.1 505 VKHTLSKRKEAYETIYLNEKPKLFMKRLLSMLLLRQTYENLTVTLSSlSSTDQNDIEL-LKTVDDfNFSSSLDLFQ--NVNVLDITEDGrrnWNLYESK 600
                 665553344444777777899********************44333344444444444.4444442379*******..99****99999999******* PP

      DHC_N1 292 Fkerikdlerrlqaiinqafedasslesalellrkfesllerpkikaaleekytdllqmykeeleavkklfekqkenps..aplakn.mPpvaGaiiwa 387
                 F++  ++++++ +++i+++fe+++++ + + ++ k++sll rpkik+a++e++ +l++ +++e+ ++k++f++  ++ +  a+ + + +Ppv+Gai+w+
  EPX73119.1 601 FNDILSKFDNSFISFIKEKFESCENTTRLISMFLKYNSLLMRPKIKNAVREYHLQLINGVNDEVITLKSRFTDITSDLElfAMHQLRdIPPVSGAIMWS 699
                 *************************************************************************999877899999999*********** PP

      DHC_N1 388 rqlerrieepmekfee.egegllkteegkkvkkkynelakkLkeyerklfeeWleeveekseeklkrpLLvredettk....llevNFdpellallrEv 481
                  q+ rr++++ +++   +g +l +++eg+++k++ ++l+k L+     ++++Wl++++ +  +     ++++ +  t+     ++v +d++l+ l++E 
  EPX73119.1 700 SQVTRRLQKYCSQLDViLGDDLTTYNEGTRLKSEAQSLQKRLD--PLVIYKSWLSSLSLDVFD-FTTHIFKIVP-ITEmnclEISVTLDSQLMMLIKEF 794
                 ***************779999**********************..***********9977766.7778****88.5556889999************** PP

      DHC_N1 482 kylqrlgfevPesakniakqeeklrkyaesLellvreynrilesllp..verpLlaeelkeldaklepGltklnWns 556
                 + l+++g+e+Pe  ++i+++ +kl+++a +L+ + + yn+  + +++  +++ Llae  ++++ ++++ l  l+W++
  EPX73119.1 795 RTLSSMGYEIPERFSKIISNSQKLQSIAANLSSSTKLYNQSAKVVETsaAQKYLLAEVENKIQCHISENLF-LTWED 870
                 ****************************************9988865224569***************999.***97 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.035
      DHC_N1  321 lellrkfesl.lerpkikaaleekytdllqmykeeleavkklfekqkenps....aplakn.mPpvaGaiiwarqlerrieepmekfee 403 
                  l+l   f++  le+ +++++  ek++ +l++y+e+l+++++l  +q++ +     + ++     +   +i   ++l++ i + ++ +++
  EPX73119.1 1309 LKLAMFFSNWdLEKTRLHEHDLEKFSTVLKNYSEDLNSLRELLGEQCQLECllgiPTSEFSdTSKCFNEIFSYKELLTTISKNVKVLRK 1397
                  5555555644799999999999********************99988764455532222224555556666666666666666666665 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 1.2
      DHC_N1  147 isnqlieqckkylnpee...lf.g.....qeveeaikklkeaielleawkee 189 
                   +n+li+ c++ ++  +   lf +     + ++e+i kl++ ++ l+ w e+
  EPX73119.1 1543 DCNKLISDCEEWIDQLNtvkLFeNynqvkYSADELIGKLSDFLDFLNVWMEI 1594
                  3666666676666644456666423333344446677776666666666655 PP

  == domain 4  score: -0.9 bits;  conditional E-value: 0.76
      DHC_N1  255 q.....................ieeileefeeaveklksksydvLd.vsaee..feadfkeFkerikdle 300 
                                        +++++ e  ++ +klk +s ++ d   +e+  +e+ +++F+e  ++l 
  EPX73119.1 3390 IsegldkelmgmqedyatliteVHTLKIELANIQDKLK-RSLKIIDdMASEKdyWENFMNSFDEALSNLN 3458
                  24444444445555555555556666666777777777.6677777433333678888888888777775 PP

>> DHC_N2  Dynein heavy chain, N-terminal region 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       7.5   4.8e+03     168     197 ..     245     274 ..     231     284 .. 0.77
   2 ?   -1.1   0.1       1.3   8.1e+02     160     231 ..     435     504 ..     417     515 .. 0.76
   3 ?   -3.0   0.0       4.5   2.9e+03      36      79 ..    1186    1234 ..    1172    1250 .. 0.60
   4 !  202.9   5.8   1.4e-62   8.7e-60       3     390 ..    1373    1767 ..    1371    1773 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 7.5
                 TEEE..THHHHHHHHHHHHHHHHTCSSSTT CS
      DHC_N2 168 vfilkgvdeiielledhivklqsmksspyv 197
                    l+++++++++le ++++lq+ +s p+v
  EPX73119.1 245 YLQLSNTKKVFTELELSLANLQTDRSVPHV 274
                 3446679****************9999998 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 1.3
                 EEE-SSS.TEEE...THHHHHHHHHHHHHHHHTCSSSTT..THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      DHC_N2 160 lteykdsgvfilkg.vdeiielledhivklqsmksspyvkpfeeeveewekklsrlqeildewlkvQrkWlyL 231
                 ++++k+s  + l++ ++ +  l +d + kl+ +++s y+  ++ +  +++++ls + + l+ w +  +++l L
  EPX73119.1 435 MKRWKTS-SYPLSRtITFLNCLADDFLSKLTEILGSDYL--LAMSFADFQHNLSIALNALTTWDSSNKEFLLL 504
                 4456655.4455553666677789999************..79********************9988887766 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 4.5
                  XXXXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXXXXXXXXX CS
      DHC_N2   36 ldveeleeevkellkklkklpkalke.....wevakelkekieefkevl 79  
                  l  +el + +++l k+l++ ++ l++     we++ke +e+i ++k +l
  EPX73119.1 1186 LLSQELVDSAHDLRKDLSHYSNVLRNiklsdWELVKEANESIANLKISL 1234
                  4455555566666666655444444444444888888888888776555 PP

  == domain 4  score: 202.9 bits;  conditional E-value: 1.4e-62
                  XXXXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
      DHC_N2    3 eikkelellkklwdlvsewqekleewkktpfkeldveeleeevkellkklkklpkalkewevakelkekieefkevlplieelrnpalrerHwkels 99  
                  ++ +e+ ++k+l +++s+  + l++++ktp+  l++e+l +e++e  k+l ++p ++k+   +++l ++i +++  +pl++el++ ++ ++Hw++l 
  EPX73119.1 1373 KCFNEIFSYKELLTTISKNVKVLRKYEKTPWLLLNCEALVNELTEHAKELDQCPSNMKSLAPYTKLTSRIVDILGAMPLLSELKSNNFGNEHWQKLL 1469
                  67899999***************************************************************************************** PP

                  XXX..XXXXXXXX.XXXXXXXXXXX..XXXXXXXXXXXXXX-HHHHHHHHHHHHHHTS---EEEE-SSS.TEEE..THHHHHHHHHHHHHHHHTCSS CS
      DHC_N2  100 ellgvikdpdseesltlgdllelgl..leeeieeisekAtkEaslekalkkieeewkelefelteykdsgvfilkgvdeiielledhivklqsmkss 194 
                  + +g+  + +s+e+ tl+d+l ++   +++ +++i+++A +Ea+++++l+ ++ + +++ef+++ y+++ +++lk+++++i+ +e+ i +l+++k  
  EPX73119.1 1470 SAMGI-LQSSSSENWTLEDVLGFKFdsHQSLVKDIIKEADEEATIRNTLQTVCLNSESYEFQFVLYDNR-TYLLKDCNKLISDCEEWIDQLNTVKLF 1564
                  ***95.44577889***********988**************************************988.9************************** PP

                  STT..THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT.THH.HHHHTHHHHHHHHHHHHHHHHHHHHHHTTSGGGG...STTHHHHHHHHHHH CS
      DHC_N2  195 pyvkpfeeeveewekklsrlqeildewlkvQrkWlyLepifssed.irkqlpeeakrFksvdkewkkimkevskdpnvleatskpgllekleelneq 290 
                  + +++++ +++e+  kls + ++l++w+++Q+ W yL+++fs+++  ++ lp+ +  + s +k++ + ++ + +++ v e+ + ++ +    +l  +
  EPX73119.1 1565 ENYNQVKYSADELIGKLSDFLDFLNVWMEIQQHWTYLDGVFSTNEvFQSLLPQATVAYFSATKSYTQGINLLLSSKGVKEFYKLQSPKAFADTLLLS 1661
                  99988**************************************755*********************999998888899987666666678899*** PP

                  HHHHHHHHHHHHHHHHHHSTTHHHH-HHHHHHHHHTTTTSGGGHHHHHHHHSSEEEESE......EEEEEETTS-EEEEE..E.EEE........HH CS
      DHC_N2  291 lekiqksLneyLekkRlafpRFyFlsddeLleilsqskdpsavqphlkkcFegiaslefee.kkeitgmiskegEkvelseargnve........eW 378 
                  l +i++ L +y+e++Rl+fpR++Fl+d++Lle++ + ++   + +++  +F+g++ l +++ +  i ++i  e   + ls   ++v+        eW
  EPX73119.1 1662 LIDIKRMLVDYFESERLKFPRLFFLGDEDLLELVCHINHKATLDKYIGTLFPGMNGLIINQgDGAIEKLITDEYLSLVLS---SPVKikqesgcfEW 1755
                  ***********************************************************998888889998665555555...45555566778899 PP

                  HHHHHHHHHHHH CS
      DHC_N2  379 Lneleeemkktl 390 
                  ++ +ee +k+ l
  EPX73119.1 1756 ISFIEEDIKNIL 1767
                  999999999877 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.59   3.8e+02      39      54 ..    1947    1962 ..    1915    1980 .. 0.79
   2 !    8.5   0.0    0.0021       1.3      26      59 ..    2221    2254 ..    2209    2269 .. 0.84
   3 !   86.5   0.0   2.3e-27   1.5e-24      13     178 ..    2544    2711 ..    2534    2714 .. 0.90

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.59
       AAA_7   39 vGptGtGKtviikdll 54  
                   Gp+GtGKt ++k l 
  EPX73119.1 1947 SGPAGTGKTETVKALG 1962
                  6**********99875 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0021
       AAA_7   26 lelllknkkpvllvGptGtGKtviikdllkkldk 59  
                  l++l +  + ++++G++G+GKt++ k+ll++l++
  EPX73119.1 2221 LHQLSEVYNGIIIYGSSGSGKTLVWKNLLNALSR 2254
                  56677788899*******************9984 PP

  == domain 3  score: 86.5 bits;  conditional E-value: 2.3e-27
       AAA_7   13 lVptvdtvrysyllelllknkkpvllvGptGtGKtviikdllkkldkekylsltinfsaqtsanqlqdiieskl..ekrrkgvygPp.ggkklvvFv 106 
                  ++ t++ +ry+ l++ ll  +  ++++Gp G+GK++++ ++l+  d  ++ ++++nfsa+tsa  + +++e++     r+   y+ p ++k+l vF 
  EPX73119.1 2544 VIRTTEVIRYEKLINNLLYMNSCLIFCGPPGSGKSMTVLHFLNGND--DIDVAVMNFSASTSAYAIIRFLERNTvySIRANASYVTPkNKKTLAVFF 2638
                  799****************************************988..9**********************98622557777776551566789*** PP

       AAA_7  107 DDlnmpakekygaqppiellRqlldyggwYdrkklefkeikdvqlvaamgppg.ggrneitpRllrhfnvlai 178 
                  D++n+p++ + + + ++ +lR +l ++g+++ k  +++++k + + +a++pp   gr+++++R+lr+  ++++
  EPX73119.1 2639 DEINLPKPSRNNGNDALCFLRCVLHHKGFWHPKLKKWINMKRILIFGACNPPTdHGRSSLSSRILRKSVIIQY 2711
                  ********************************999***************986379***********999876 PP

>> AAA_9  ATP-binding dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.7      0.41   2.6e+02     154     194 ..    3391    3431 ..    3379    3442 .. 0.86
   2 !   96.5   1.8   1.8e-30   1.2e-27       6     216 ..    3517    3729 ..    3512    3732 .. 0.95

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.41
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       AAA_9  154 aevvkkerpeleekkeeliqeeaenkkqlkeledklLeeLs 194 
                  +e + ke   ++e   +li+e ++ k++l++++dkl ++L+
  EPX73119.1 3391 SEGLDKELMGMQEDYATLITEVHTLKIELANIQDKLKRSLK 3431
                  56677888899************************988875 PP

  == domain 2  score: 96.5 bits;  conditional E-value: 1.8e-30
                  HT--.STHHHHHHHHHHH..SSEEEEESSSTTHHHHHHH......HEESTTSTTHHHHHHHHHHTTSEEEESTT.SSHHSTTHHHHTTCCEE...CE CS
       AAA_9    6 qgLP.sDelsieNaiivtkserwPlliDPqgqankwiknkekeklkviklsdkkflktLenairfGkplliedvgeeldpiLepvLekeiik.kgrk 100 
                  ++LP +D++s+ N +i++++ r  l+iDP+  a + +k    ++  +++l +k+f ++L+ a+++Gkp+li+dv e+  p+L+ +L+  +++ +g+ 
  EPX73119.1 3517 TKLPyTDDYSMTNMAITNECVRPALVIDPSLYASEPLKVLFGNSTICLSLISKTFKSQLKAALKLGKPILIKDV-ENWCPLLDMLLSPVLYSgSGKV 3612
                  667757**********************************999999****************************.************999994569* PP

                  EEESSSE.EE--SSCEEEEEESSTTSH.HHHHHHHHSEEEE---SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS CS
       AAA_9  101 liklgdkeieysenFrLylttklsnph.yspeiaakvtlinFtvteeGLedqlLaevvkkerpeleekkeeliqeeaenkkqlkeledklLeeLsea 196 
                   +k+ ++  e+s   +++++++  n + +s +i++ +t+in+t t++GL+  lL+ +++ e+ +l ++k+   ++  + k +l + +++lL  Ls++
  EPX73119.1 3613 SVKVSKDVFEVSVPLKIIIHSNTFNDSfMSYKISSFTTIINYTPTSSGLSRDLLNSLITIENGDLIQNKNYTRERLLQIKSELFTQQKNLLTILSSQ 3709
                  ***********************999945889***************************************************************** PP

                  SSSSSTHHHHHHHHHHHHHH CS
       AAA_9  197 egniLedeelietLeksKkt 216 
                  + +iL +++++  L++ +++
  EPX73119.1 3710 NIDILANDDVVLILNSLRAS 3729
                  ***************99875 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   1.4e-05    0.0092       6     138 .]    1948    2069 ..    1947    2069 .. 0.86
   2 !   47.2   0.0   3.4e-15   2.2e-12       2     117 ..    2231    2347 ..    2230    2364 .. 0.90
   3 !   15.6   0.0   1.9e-05     0.012       2     136 ..    2567    2704 ..    2566    2705 .. 0.80
   4 ?    0.5   0.0      0.89   5.7e+02      69     137 ..    2966    3055 ..    2956    3056 .. 0.78

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.4e-05
                  --SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------G-SEEEEESGGG--HHHHHHHHHHHHSSEEE..-SSSE CS
       AAA_5    6 GppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraaregeilvlDEveraesevlnsLlslleerrllleeggel 102 
                  Gp GtgK+e ++ l a l+r v++ ++ ++ +++ ++  +                 ++ g  +++DE++r+++ +l+++ + +   +     + + 
  EPX73119.1 1948 GPAGTGKTETVKALGAYLGRYVFVFNCDESFNYKVIRRILI--------------GLCQLGVYACFDEFNRLNPGTLSTVSQDIQLIQTNCKRSSKP 2030
                  9****************************999987655544..............46799********************99999998888776666 PP

                  EE---.........-EEEEEESS--.-TT-TTHHHHTT- CS
       AAA_5  103 vkaknddller...frviatanpldrslnelspalrsRf 138 
                      n++++++   f ++ t np +++++el  +l+++f
  EPX73119.1 2031 LIPINNQFIKAdrsFCIFITLNPSYQGRSELPCNLKRLF 2069
                  55555555555579*********************9998 PP

  == domain 2  score: 47.2 bits;  conditional E-value: 3.4e-15
                  EEEE--SSSSHHHHHHHGGGGB....S--EEEEE--TT--HHHHH--B--.........--------.......G-SEEEEESGGG--HHHHHHHHH CS
       AAA_5    2 vlLvGppGtgKselaerlaaal....nreveyvqltrdtteedlkgrreikngttslvdsplvraar.......egeilvlDEveraesevlnsLls 87  
                  +++ G +G+gK+ +++ l+ al     ++ +yv  ++++ ++ l+g +++   t +++d+++++  r       + +i+++D+++   ++++++++s
  EPX73119.1 2231 IIIYGSSGSGKTLVWKNLLNALsrllIKTEHYVISPKSIDKDSLFGTLDL--TTHEWTDGIFTKILRsaigsstRYWIIFDDDIT---PDWVETMNS 2322
                  799*****************99988888889999***************8..9********************************...********* PP

                  HHHSSEEE..-SSSEEE---......-EEE CS
       AAA_5   88 lleerrllleeggelvkaknddllerfrvi 117 
                  ll+++r+l+ ++ge++  + +     + ++
  EPX73119.1 2323 LLDDNRFLTLPNGERIPLSVN-----VKIL 2347
                  **************9987665.....4555 PP

  == domain 3  score: 15.6 bits;  conditional E-value: 1.9e-05
                  EEEE--SSSSHHHHHHHGGGGB.S--EEEEE--TT--HHHHH--B--.........--.------G-SEEEEESGGG--H......HHHHHHHHHHH CS
       AAA_5    2 vlLvGppGtgKselaerlaaal.nreveyvqltrdtteedlkgrreikngttslvdsp.lvraaregeilvlDEveraes......evlnsLlslle 90  
                  ++  GppG+gKs+ + +++       v +++++++t++  ++  +e +     + + + ++ + ++   +++DE++  ++      ++l  L  +l+
  EPX73119.1 2567 LIFCGPPGSGKSMTVLHFLNGNdDIDVAVMNFSASTSAYAIIRFLERNTVYSIRANASyVTPKNKKTLAVFFDEINLPKPsrnngnDALCFLRCVLH 2663
                  6889*****************9999******************9997644444444440445555888899****9654412222268888999999 PP

                  SSEEE..-SSSEEE---......-EEEEEESS--..-TT-TTHHHHT CS
       AAA_5   91 errllleeggelvkaknddllerfrviatanpld.rslnelspalrs 136 
                  ++ ++ +++++ ++ k+      + +++++np+  +++++ls+++++
  EPX73119.1 2664 HKGFWHPKLKKWINMKR------ILIFGACNPPTdHGRSSLSSRILR 2704
                  99999999999998888......99******9999999999988765 PP

  == domain 4  score: 0.5 bits;  conditional E-value: 0.89
                  EEEESGGG--HHHHHHHHHHHHSSEEE..-SSSEEE---..........................-EEEEEESS--..-TT-TTHHHHTT CS
       AAA_5   69 lvlDEveraesevlnsLlslleerrllleeggelvkakndd.ller...................frviatanpld.rslnelspalrsR 137 
                  l +D ++ ++s+v++++++ll    ++   ++e+    +++ +l+                    ++v++   + + ++ln lspal+ R
  EPX73119.1 2966 LAIDHFQCVNSDVFEVMNNLLTGSDISCLFSDEEWENLKKSiMLRHlckldsevvemvqtligqnLHVFFIVYTSSyKGLNILSPALINR 3055
                  5688899999***********999999888888887777665555589999999999999999994444444444447899999999988 PP

>> MT  Microtubule-binding stalk of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.7   5.5   1.3e-24   8.4e-22       2     335 ..    3153    3482 ..    3152    3489 .. 0.91

  Alignments for each domain:
  == domain 1  score: 77.7 bits;  conditional E-value: 1.3e-24
          MT    2 rlengllklqstaaqvddlkaklaaqevelkqknedad.kliqvvgvetekvskekaiadeeekkvavinkevkkkqkdceedlakaepallaaqea 97  
                   ++ngl kl+ t +q+  lk  l  qe  l++k ++a+ +l +++  + e   ++k + d  e+ +   n+e++ k+    ++l+  +pa+  a+++
  EPX73119.1 3153 HVDNGLKKLKQTEQQIHVLKNMLYEQESVLNDKTKHANsRLHNLMNAKQEVEIRQKEVLDL-ERNLRGQNEEIESKTSLVLKELSIVKPAIEEAKAS 3248
                  579*******************************999736777888888888899999986.5678999**************************** PP

          MT   98 lntlnktnltelksfgsppdavvnvaaavmvllaprgkvpkdrswkaakivmakvdafldslinfdkenihe.nclkai.keylndpefepefiksk 192 
                  +  ++k+ l+el+s+  ppd v     av  ll       k  swk+ + ++++ + f+  +  fd e+  + +  k +  ey ++ +f+ e ++  
  EPX73119.1 3249 VSNIKKSHLSELRSLSRPPDVVKLTMEAVCKLLGH-----KITSWKSVQSLLKR-EDFITNVLTFDSEKQLNpTLRKRLeTEYFRNSTFKYEVVNRA 3339
                  ********************999999999999864.....568****9988766.569999999*99975551556666358*************** PP

          MT  193 slaaaglcswvinivrfyevycdvepkrqalekanaelaaaqeklaaikakiaelnanlaeltaafekatadklkcqqeaeatartislanrlvggl 289 
                  s a++ l  w+    ++ +v   + p   ++ + +a+ ++ q kl+ +k+    l+++l  +   +    ++    + e    +  ++ + +++  +
  EPX73119.1 3340 SKACGPLFLWIRSHCNYSKVLQKISPLNDSVSQLKAKGEDMQRKLSEVKSISEGLDKELMGMQEDYATLITEVHTLKIELANIQDKLKRSLKIIDDM 3436
                  **************************************************9999*************99999999999999999999999******* PP

          MT  290 asenvrwaeavenfksqektlcgdvllitafvsyvgfftkkyrqel 335 
                  ase+  w + ++ f +    l g  +l++ ++ y g++    r+ +
  EPX73119.1 3437 ASEKDYWENFMNSFDEALSNLNGRSVLVAFIINYAGLLDPVERETV 3482
                  ************************************9876666655 PP

>> Dynein_heavy  Dynein heavy chain region D6 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.1       2.1   1.3e+03      66      98 ..     319     355 ..     311     375 .. 0.70
   2 ?    0.7   0.1      0.85   5.4e+02      70     109 ..    2787    2830 ..    2774    2835 .. 0.70
   3 !   50.3   0.0   3.6e-16   2.3e-13       3     103 ..    3931    4029 ..    3929    4036 .. 0.93

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 2.1
                   -CCCHHHHHHH...........HHTT-EEEEEEES-T CS
  Dynein_heavy  66 apswlkeLekileel....eeklhssfRlwltsepsp 98 
                   + sw+++++k++e++    + +++++ R w + + s 
    EPX73119.1 319 VHSWINSINKLVETSqtkeQGSASQEIRFWHSLCLSY 355
                   479********99766666666777999998877654 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.85
                    HHHHHHH.........HHTT-EEEEEEES-TT..S-HHHHHTSE CS
  Dynein_heavy   70 lkeLekileel..eeklhssfRlwltsepspk..fPislLqssi 109 
                    +k+L++i  ++  +   h+++R++l    +++  + +s+Lq+s+
    EPX73119.1 2787 TKSLNRITFQQllQIWYHEACRVFLDRLNHKDfrLGESILQESL 2830
                    4555555433356777899***********97336788999986 PP

  == domain 3  score: 50.3 bits;  conditional E-value: 3.6e-16
                    TS-EEEEE-TT--THHHHHHHHHHTT--EEEEETTSH.HHHHHHHHHHHHHHHT-EEEEE-GGG-CCCHHHHHHH.......HHTT-EEEEEEES CS
  Dynein_heavy    3 ttPvlfilspgadptesleklakklkklvksvslGqg.qeeeaekalekaakegsWvlLqNchlapswlkeLekileeleeklhssfRlwltsep 96  
                     +P+++i  +g+d  + le+   + +  + ++ +G+  +ee a+ +l ka +e +Wv+L+N+hl++swl+++++ l+    +lh++fR+ +ts+ 
    EPX73119.1 3931 DMPLILIPLSGIDVKQYLEQCLAERQVRCITIPMGSLdSEELADTTLIKAEHEPCWVFLENIHLSQSWLENISSKLK---GDLHPEFRMVCTSDI 4022
                    68******************88877777799*****978889*********************************97...899************ PP

                    -TTS-HH CS
  Dynein_heavy   97 spkfPis 103 
                    s +fPi 
    EPX73119.1 4023 SFEFPIW 4029
                    *****96 PP

>> AAA_8  P-loop containing dynein motor region D4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       5.9   3.8e+03      94     151 ..    1249    1304 ..    1224    1320 .. 0.56
   2 !   48.0   0.2   1.6e-15     1e-12      14     258 ..    2894    3137 ..    2883    3139 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 5.9
       AAA_8   94 ieesfledinnlLntGevpnLfskeekeeiieelrkeakkqgvedskesllnffikrv 151 
                    e++++d n  L++G +p  +   e +  + +l++   ++ +++ + +l++f  + +
  EPX73119.1 1249 STENIFKDTNYHLTNGWIPYKLLLHEADPYFIALNDV--DNYYTTYRSKLIEFAKNSC 1304
                  5678888888888888888766666666666666644..2223333334444333333 PP

  == domain 2  score: 48.0 bits;  conditional E-value: 1.6e-15
       AAA_8   14 arilRvlrqprghaLlvGvgGsGrqsltkLAafiaelelfqievtkkykekefredlkkllkkagikqkevvfllsdnqiieesfledinnlLntGe 110 
                  +ri Rv    ++ha + G  Gs ++s+ +  +  ++++l  ++   + + ++  e+lk++++ ++++  + ++ +++ q ++ +++e +nnlL+  +
  EPX73119.1 2894 IRIGRVFAHTNSHAVIYGEYGSNQRSVLEFVSWKLGYKLLDFNPCLQPEFSDLLEELKTIINLVVTDSVKLCLAIDHFQCVNSDVFEVMNNLLTGSD 2990
                  8************************************************************************************************ PP

       AAA_8  111 vpnLfskeekeeiieelrkeakkqgvedskesllnffikrvrenLhivlcmspvgeafrsrlrkfpsLvncttidwfqeWPeeaLleVaekvlee.. 205 
                  ++ Lfs+ee e++ +++  +    +  +   +++++ +  + +nLh+ + +    ++++      p+L+n +t  +fq+  e + +e  ++ l++  
  EPX73119.1 2991 ISCLFSDEEWENLKKSIMLR----HLCKLDSEVVEMVQTLIGQNLHVFFIVYT--SSYKGLNILSPALINRCTTIYFQPPDELTVHELFKNELSKip 3081
                  *************9999843....456677899***************99988..5566666667**************99999*********9855 PP

       AAA_8  206 ..eeeieeelke.....sivkvlvevhssveelsekfleelkrkiyvtpksylellktyk 258 
                    +    +el e     +    lv+v    +++ + ++++ k+++ ++p+   +++ ++ 
  EPX73119.1 3082 dfN----DELDErclleKHLPNLVKVLFDLHSYMAAYFRKRKNNLSMSPNFLSDFVVLFV 3137
                  441....44433333333334444455555556677888888888888877777777765 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.0     0.026        17      12      83 ..    1948    2021 ..    1945    2036 .. 0.72
   2 !   11.4   0.0   0.00047       0.3       8      31 ..    2231    2254 ..    2227    2303 .. 0.72
   3 !   19.2   0.0   1.8e-06    0.0011       6      64 ..    2565    2615 ..    2562    2639 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.026
      AAA_22   12 GesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelka...........erlsseelleale 83  
                  G++GtGKT +++ l   l         ++ v+ +++ +s + k ++r l    +l+  a              + ++ +++++
  EPX73119.1 1948 GPAGTGKTETVKALGAYL---------GRYVFVFNCDESFNYKVIRRILIGLCQLGVYAcfdefnrlnpgTLSTVSQDIQLIQ 2021
                  9**************999.........88889999999998888888877777776666666666665544444444445555 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00047
      AAA_22    8 lvvtGesGtGKTtllrrlleqlde 31  
                  ++++G sG+GKT++ ++ll+ l +
  EPX73119.1 2231 IIIYGSSGSGKTLVWKNLLNALSR 2254
                  79******************9953 PP

  == domain 3  score: 19.2 bits;  conditional E-value: 1.8e-06
      AAA_22    6 gilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellral 64  
                  ++l+ +G++G+GK++++  +l+ +d        + +v+ ++ ++sts   + r l r++
  EPX73119.1 2565 SCLIFCGPPGSGKSMTVLHFLNGND--------DIDVAVMNFSASTSAYAIIRFLERNT 2615
                  799*********************8........**************999999888876 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.0   0.00011     0.073       4      36 ..    1947    1979 ..    1946    2032 .. 0.80
   2 !    7.7   0.0    0.0069       4.4       1      29 [.    2231    2259 ..    2231    2312 .. 0.79
   3 !   11.9   0.0   0.00036      0.23       1      74 [.    2567    2648 ..    2567    2705 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 0.00011
                  ESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSS CS
         AAA    4 yGppGtGKTllakavakelgvefleisgsells 36  
                  +Gp GtGKT ++ka+   lg++++ +++ e ++
  EPX73119.1 1947 SGPAGTGKTETVKALGAYLGRYVFVFNCDESFN 1979
                  6***************************99883 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.0069
                  EEEESSTTSSHHHHHHHHHHHHTHEEEEE CS
         AAA    1 vllyGppGtGKTllakavakelgveflei 29  
                  +++yG  G GKTl+ k + + l++ ++++
  EPX73119.1 2231 IIIYGSSGSGKTLVWKNLLNALSRLLIKT 2259
                  589******************97555544 PP

  == domain 3  score: 11.9 bits;  conditional E-value: 0.00036
                  EEEESSTTSSHHHHHHHHHHH...HTHEEEEEETTTCSSS....STTHHHHHHHHHHHHHHHTS.TSEEEEEETGGGHHHHH CS
         AAA    1 vllyGppGtGKTllakavake...lgvefleisgsellsk....yvgesekkirelfkeakeka.kpsilfiDEidalaksr 74  
                  ++++GppG GK++++    +    ++v ++++s+s+        +  ++  +ir+  + +  k+ k+  +f+DEi    +sr
  EPX73119.1 2567 LIFCGPPGSGKSMTVLHFLNGnddIDVAVMNFSASTSAYAiirfLERNTVYSIRANASYVTPKNkKTLAVFFDEINLPKPSR 2648
                  589***************999444457777777777664434434444445555555555555555699*****99888887 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0     0.019        12      30      69 ..    1947    1980 ..    1928    2012 .. 0.83
   2 !   10.5   0.0   0.00093      0.59      25      83 ..    2229    2276 ..    2214    2338 .. 0.75
   3 ?    5.9   0.0     0.024        15      25      46 ..    2565    2586 ..    2545    2638 .. 0.75
   4 ?    2.2   0.0      0.33   2.1e+02     117     162 ..    2944    2989 ..    2911    2996 .. 0.85

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.019
      AAA_16   30 sGesGvGKsslvrellralekdggiflrgkcdqlesaipy 69  
                  sG++G+GK+  v++l  a+ ++  +++  +cd++     y
  EPX73119.1 1947 SGPAGTGKTETVKALG-AYLGR--YVFVFNCDES---FNY 1980
                  7**************9.55555..6788888887...444 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00093
      AAA_16   25 elvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipysalaqalareellr 83  
                  + ++++G sG+GK+ + + ll+al++     l  k++++      ++  + +++++l+ 
  EPX73119.1 2229 NGIIIYGSSGSGKTLVWKNLLNALSR-----LLIKTEHY------VISPKSIDKDSLFG 2276
                  789******************87775.....44444444......33444444555554 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.024
      AAA_16   25 elvllsGesGvGKsslvrellr 46  
                  +++++ G++G+GKs  v ++l+
  EPX73119.1 2565 SCLIFCGPPGSGKSMTVLHFLN 2586
                  68999************99985 PP

  == domain 4  score: 2.2 bits;  conditional E-value: 0.33
      AAA_16  117 srllellkrllallsrderplvlvlDdlqwadeaslqllaaLlrll 162 
                  s+lle+lk +++l  +d+ +l l +D++q + ++  +++ +Ll+ +
  EPX73119.1 2944 SDLLEELKTIINLVVTDSVKLCLAIDHFQCVNSDVFEVMNNLLTGS 2989
                  799*************999**********88888888877777765 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.3       2.7   1.8e+03      50     125 ..    1501    1590 ..    1482    1594 .. 0.65
   2 ?    6.4   0.0     0.011       6.8       9      42 ..    1948    1985 ..    1946    2020 .. 0.86
   3 !    7.6   0.0    0.0044       2.8       5      33 ..    2231    2261 ..    2228    2287 .. 0.82
   4 !    6.9   0.0    0.0075       4.8       5      74 ..    2567    2641 ..    2563    2643 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 2.7
      AAA_24   50 edfldevvel............aaeladyktlviDtideleelclaevirqnekaeskedkgdgkGygelaeefrrllkklqelrk..nv 125 
                  +d+++e++e             + e  +++ +  D+ + l + c + + +  e+ ++ +  + +  y +++    +l+ kl+++ +  nv
  EPX73119.1 1501 KDIIKEADEEatirntlqtvclNSESYEFQFVLYDNRTYLLKDCNKLISDCEEWIDQLNTVKLFENYNQVKYSADELIGKLSDFLDflNV 1590
                  455555555544444444556666666688888888888888888888888888666666666666887777777777777776655555 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.011
      AAA_24    9 GpsgiGKTtlakel....gpkplfidtekGlksldadk 42  
                  Gp+g+GKT ++k l    g  +++++++++++    ++
  EPX73119.1 1948 GPAGTGKTETVKALgaylGRYVFVFNCDESFNYKVIRR 1985
                  9****************99999999****998766555 PP

  == domain 3  score: 7.6 bits;  conditional E-value: 0.0044
      AAA_24    5 iliyGpsgiGKTtlakel..gpkplfidtek 33  
                  i+iyG+sg+GKT + k+l    + l+i te+
  EPX73119.1 2231 IIIYGSSGSGKTLVWKNLlnALSRLLIKTEH 2261
                  89**************997756666777776 PP

  == domain 4  score: 6.9 bits;  conditional E-value: 0.0075
      AAA_24    5 iliyGpsgiGKTtlakel.....gpkplfidtekGlksldadkfpdieswedfldevvelaaeladyktlviDti 74  
                  ++  Gp+g+GK+++++++       +++++++ +++ +   ++f + +++  ++  + ++  ++++   +++D i
  EPX73119.1 2567 LIFCGPPGSGKSMTVLHFlngndDIDVAVMNFSASTSAYAIIRFLERNTVYSIRANASYVTPKNKKTLAVFFDEI 2641
                  5567***************99988899***********9999999999999999999999888887778888876 PP

>> AAA_lid_11  Dynein heavy chain AAA lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0   1.8e-07   0.00012      19     160 ..    4057    4212 ..    4040    4215 .. 0.79

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 1.8e-07
                  ..........HHHHHHHHHHHHHHHHHGGGGTTTS-SS-----HHHHHHHHHHHHHHHHHCSS.......GGS-HHHHHHHHHHTTTSTT--SHHHH CS
  AAA_lid_11   19 ffee..keeefkkllfsLcffHavvqeRrkFgplGwnipYeFnesdleisvevlkmyldeyee.......kevpwealkyligeinYGGrvtDdwDr 106 
                  f++e    +e+  + f ++++H+++ eR    ++      + n+ dl ++++ l+   + +++       +++pw+ ++ l+ ++ Y  +     D 
  EPX73119.1 4057 FMSElgIPQEYDIMRFLIAWIHTMIFERFCIVEVNREKRADLNDIDLFTAMNALSACARLVSSqkkendiQKFPWDMFQELVLNVAYAPKLSSRNDI 4153
                  3333445778999***************9999999999*****************995444334457799*************************** PP

                  HHHHHHHHHHSSGGGGSTT......-T...E..---SSHHHHHHHHCTS-SS--CCCCTS CS
  AAA_lid_11  107 rllktyleeffseevleee.yk...sgeyki..peeksleeyleyieslpladspevfgl 160 
                    l+ +l  f+++     + ++   s +y +  p+e + +++ ++ + lp++ +p ++g+
  EPX73119.1 4154 SFLSNILLYFIKQLKEG-RvLNlslSSNYLLnpPSEYTFASCEDFAKGLPDNIPPVWLGI 4212
                  *****999888764332.222232435677776888999****************99997 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0       0.6   3.8e+02       4      23 ..    1947    1966 ..    1946    2021 .. 0.89
   2 !   10.2   0.0    0.0012      0.74       1      37 [.    2231    2267 ..    2231    2287 .. 0.76
   3 ?    5.0   0.0     0.051        32       2      57 ..    2568    2639 ..    2567    2665 .. 0.60

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.6
  RNA_helicase    4 yGpsgeGKStlakeLakall 23  
                    +Gp+g+GK+ ++k L + l 
    EPX73119.1 1947 SGPAGTGKTETVKALGAYLG 1966
                    69***********9988776 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.0012
  RNA_helicase    1 iwlyGpsgeGKStlakeLakallkklklkkkdsvys.r 37  
                    i++yG+sg GK+++ k+L +al++ l  k+++ v+s +
    EPX73119.1 2231 IIIYGSSGSGKTLVWKNLLNALSRLL-IKTEHYVISpK 2267
                    789*******************9655.55555555534 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.051
  RNA_helicase    2 wlyGpsgeGKStlakeLakallkkl.................klkkkdsvysrnpeddfwdgYtgqevvvidD 57  
                    +++Gp+g GKS+++ ++ +    ++                  + ++++vys  ++ +++   ++++  v++D
    EPX73119.1 2568 IFCGPPGSGKSMTVLHFLNGND-DIdvavmnfsastsayaiiRFLERNTVYSIRANASYVTPKNKKTLAVFFD 2639
                    79**********9988554322.33455566677777777777777777777555555554444444433333 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.93     6e+02       6      28 ..    1948    1971 ..    1947    1986 .. 0.86
   2 !    7.6   0.0    0.0062         4       2      32 ..    2231    2261 ..    2231    2309 .. 0.75
   3 !    7.3   0.0    0.0075       4.8       3      16 ..    2568    2581 ..    2567    2596 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.93
      AAA_33    6 GlpGsGKstlaerllkklg.avll 28  
                  G++G+GK+  ++ l + lg +v++
  EPX73119.1 1948 GPAGTGKTETVKALGAYLGrYVFV 1971
                  9***********998888887665 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0062
      AAA_33    2 vllvGlpGsGKstlaerllkklgavllssdt 32  
                  +++ G +GsGK+ + ++ll++l   l+ +  
  EPX73119.1 2231 IIIYGSSGSGKTLVWKNLLNALSRLLIKTEH 2261
                  6789***************999976666654 PP

  == domain 3  score: 7.3 bits;  conditional E-value: 0.0075
      AAA_33    3 llvGlpGsGKstla 16  
                  +++G+pGsGKs  +
  EPX73119.1 2568 IFCGPPGSGKSMTV 2581
                  8**********866 PP

>> Microtub_bd  Microtubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0     0.064        41      68      99 ..    2208    2244 ..    2193    2267 .. 0.67
   2 ?    0.4   0.0      0.86   5.5e+02      97     118 ..    2387    2408 ..    2380    2420 .. 0.90
   3 !    7.2   0.0    0.0069       4.4      81     110 ..    2562    2591 ..    2550    2630 .. 0.74

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.064
                   CCCCHHHHHHHH.....TT--EEEEEEES........ CS
  Microtub_bd   68 feeisqlvqsal.....dgynvcifaygqTGsGKtyT 99  
                   ++++++l+q ++     ++    i+ yg+ GsGKt  
   EPX73119.1 2208 TSDLTYLTQKVIqlhqlSEVYNGIIIYGSSGSGKTLV 2244
                   55555555554411101333346999*********75 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.86
                   ...........ST-HCHHHHHH CS
  Microtub_bd   97 tyTmegeeeeagmipraveeif 118 
                   t+Tm++++e+++mi ++v+e++
   EPX73119.1 2387 TFTMKENSERRKMICEVVTEVM 2408
                   9*************99999876 PP

  == domain 3  score: 7.2 bits;  conditional E-value: 0.0069
                   T--EEEEEEES................ST- CS
  Microtub_bd   81 gynvcifaygqTGsGKtyTmegeeeeagmi 110 
                    +n c++++g  GsGK+ T+    + ++ i
   EPX73119.1 2562 YMNSCLIFCGPPGSGKSMTVLHFLNGNDDI 2591
                   58*****************98844433333 PP

>> Dynein_AAA_lid  Dynein heavy chain AAA lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.2   9.5e-06    0.0061      59     125 ..    2460    2526 ..    2406    2529 .. 0.79

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 9.5e-06
  Dynein_AAA_lid   59 eeeeleevleklflfalvWSiGatldedsrekfdeflrelleealklppeegtvyDyffdketgkWk 125 
                       +++l+++l+k fl ++ W++ +  d ds+ kf +++++ ++    + ++++ + D  +d++t++W+
      EPX73119.1 2460 GKANLAAYLKKKFLLSIAWACIGDSDLDSQFKFTNWIKKKFDLGTGISNKTDFILDLDVDTDTQNWV 2526
                      4678899*********************************997666778999**************7 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.1      0.13        83      17      35 ..    1948    1966 ..    1945    1974 .. 0.84
   2 ?    3.1   0.0      0.17   1.1e+02      13      38 ..    2231    2256 ..    2222    2274 .. 0.83
   3 ?    4.4   0.0     0.066        42       9      32 ..    2563    2586 ..    2555    2615 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.13
      AAA_19   17 aGpGtGKTrvlkhivallv 35  
                  +++GtGKT+++k+  a+l 
  EPX73119.1 1948 GPAGTGKTETVKALGAYLG 1966
                  899********99887765 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.17
      AAA_19   13 llvtaGpGtGKTrvlkhivallvelg 38  
                  +++ +  G+GKT v k  ++ l +l 
  EPX73119.1 2231 IIIYGSSGSGKTLVWKNLLNALSRLL 2256
                  7899************9999998876 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.066
      AAA_19    9 kekvllvtaGpGtGKTrvlkhiva 32  
                   +++l+  ++pG+GK+ ++ h ++
  EPX73119.1 2563 MNSCLIFCGPPGSGKSMTVLHFLN 2586
                  56789999***********99875 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0      0.13        84       5      22 ..    1948    1965 ..    1947    1994 .. 0.76
   2 ?    4.8   0.0      0.06        38       1      22 [.    2231    2252 ..    2231    2287 .. 0.79
   3 ?    2.3   0.0      0.36   2.3e+02       2      13 ..    2568    2579 ..    2567    2604 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.13
      AAA_18    5 GtpGvGKttlakeLskrl 22  
                  G++G+GKt+  k+L   l
  EPX73119.1 1948 GPAGTGKTETVKALGAYL 1965
                  9*************6655 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.06
      AAA_18    1 IlltGtpGvGKttlakeLskrl 22  
                  I++ G +G+GKt + k+L + l
  EPX73119.1 2231 IIIYGSSGSGKTLVWKNLLNAL 2252
                  9****************95554 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.36
      AAA_18    2 lltGtpGvGKtt 13  
                  + +G+pG+GK+ 
  EPX73119.1 2568 IFCGPPGSGKSM 2579
                  689*******93 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0       0.5   3.2e+02      23      41 ..    1947    1965 ..    1939    1985 .. 0.87
   2 ?    5.2   0.0     0.024        15      12      39 ..    2559    2586 ..    2553    2629 .. 0.85
   3 ?    2.0   4.1      0.23   1.5e+02     107     199 ..    3137    3238 ..    3123    3254 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.5
      AAA_11   23 qGPPGtgKTktivellsql 41  
                  +GP GtgKT t+ +l ++l
  EPX73119.1 1947 SGPAGTGKTETVKALGAYL 1965
                  69*********98876665 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.024
      AAA_11   12 salseseitliqGPPGtgKTktivells 39  
                  + l  ++  ++ GPPG+gK+ t++++l+
  EPX73119.1 2559 NLLYMNSCLIFCGPPGSGKSMTVLHFLN 2586
                  555566667889************9987 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.23
      AAA_11  107 vsleekvekrlekee.....kaqlakeiskeleklakelrafeeeeek.eklkkskekskskleqerrklkkerkelskeleeaeesle...eevld 194 
                  v++ +k+++rl +e+       ++ k++++++  l+++l ++e++ ++ +k+++s+ ++  +++qe +  +ke+ +l+++l+ ++e++e   + vl+
  EPX73119.1 3137 VKVIRKLRSRLYNEKdhvdnGLKKLKQTEQQIHVLKNMLYEQESVLNDkTKHANSRLHNLMNAKQEVEIRQKEVLDLERNLRGQNEEIEsktSLVLK 3233
                  5566666666666666665556666777777777777777777777666788888899999999999999999999999999999988877688899 PP

      AAA_11  195 eaeiv 199 
                  e +iv
  EPX73119.1 3234 ELSIV 3238
                  98888 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.1      0.28   1.8e+02       3      23 ..    2231    2251 ..    2230    2262 .. 0.85
   2 ?    8.2   0.0    0.0027       1.7       3      32 ..    2567    2596 ..    2565    2603 .. 0.92

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.28
                  EEEEESTTCCHHHHHHHHHCT CS
        cobW    3 tvltGflGsGKTtLlnhllen 23  
                  +++ G+ GsGKT + ++ll+ 
  EPX73119.1 2231 IIIYGSSGSGKTLVWKNLLNA 2251
                  5899*********99999854 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.0027
                  EEEEESTTCCHHHHHHHHHCT--SS-EEEE CS
        cobW    3 tvltGflGsGKTtLlnhllenraglklavi 32  
                  ++++G++GsGK++ + h l+ +++ ++av+
  EPX73119.1 2567 LIFCGPPGSGKSMTVLHFLNGNDDIDVAVM 2596
                  7899************************96 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.2       8.2   5.2e+03      29      44 ..    1948    1963 ..    1947    1967 .. 0.83
   2 ?    4.6   0.0     0.029        19      25      63 ..    2231    2269 ..    2227    2287 .. 0.82
   3 ?    5.4   0.0     0.016        10      25      38 ..    2567    2580 ..    2564    2588 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 8.2
  Mg_chelatase   29 GppGsGKtmlakrlps 44  
                    Gp+G+GKt   k+l +
    EPX73119.1 1948 GPAGTGKTETVKALGA 1963
                    9*******99988865 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.029
  Mg_chelatase   25 lllvGppGsGKtmlakrlpsllpplseeealevakiasv 63  
                    ++++G++GsGKt++ k l + l++l  +  + v + +s+
    EPX73119.1 2231 IIIYGSSGSGKTLVWKNLLNALSRLLIKTEHYVISPKSI 2269
                    799***************999998877766666665655 PP

  == domain 3  score: 5.4 bits;  conditional E-value: 0.016
  Mg_chelatase   25 lllvGppGsGKtml 38  
                    l+++GppGsGK+m 
    EPX73119.1 2567 LIFCGPPGSGKSMT 2580
                    89***********7 PP

>> CbiA  CobQ/CobB/MinD/ParA nucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0      0.28   1.8e+02       8      38 ..    1950    1977 ..    1946    2068 .. 0.92
   2 ?    5.7   0.0     0.022        14       2      25 ..    2231    2254 ..    2231    2261 .. 0.88

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.28
                  TTSSHHHHHHHHHHHHHHTT--EEEEEEEES CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        CbiA    8 GGvGKTtlaanLaralarrglrVllvDaDpq 38  
                   G+GKT ++ +L+++l r    V+++ +D  
  EPX73119.1 1950 AGTGKTETVKALGAYLGR---YVFVFNCDES 1977
                  69**************99...9999999965 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.022
                  EEEESSTTSSHHHHHHHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxx RF
        CbiA    2 aiastkGGvGKTtlaanLaralar 25  
                  +i+ +++G+GKT +  nL+ al+r
  EPX73119.1 2231 IIIYGSSGSGKTLVWKNLLNALSR 2254
                  58899*****************98 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.6     0.031        20      24      39 ..    1947    1962 ..    1944    1969 .. 0.87
   2 ?   -0.1   0.0      0.99   6.3e+02      21      43 ..    2231    2253 ..    2216    2269 .. 0.83
   3 ?    1.3   0.0      0.37   2.4e+02      20      38 ..    2566    2584 ..    2554    2614 .. 0.74

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.031
      AAA_30   24 tGpAGtGKttalkalr 39  
                   GpAGtGKt ++kal 
  EPX73119.1 1947 SGPAGTGKTETVKALG 1962
                  69**********9985 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.99
      AAA_30   21 avltGpAGtGKttalkalreawe 43  
                   ++ G  G+GKt + k l +a+ 
  EPX73119.1 2231 IIIYGSSGSGKTLVWKNLLNALS 2253
                  5899*********9999877765 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.37
      AAA_30   20 vavltGpAGtGKttalkal 38  
                  + +  Gp+G+GK++++ + 
  EPX73119.1 2566 CLIFCGPPGSGKSMTVLHF 2584
                  77899********987655 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       2.2   1.4e+03      36      50 ..    2231    2245 ..    2229    2254 .. 0.83
   2 ?    8.8   0.0    0.0017       1.1      23      52 ..    2554    2583 ..    2546    2585 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 2.2
      AAA_25   36 allaGapgtGKttla 50  
                  ++++G +g+GKt + 
  EPX73119.1 2231 IIIYGSSGSGKTLVW 2245
                  689*********975 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.0017
      AAA_25   23 rwlvkgllpagelallaGapgtGKttlald 52  
                  ++l+ +ll +++  +++G+pg+GK++ +l+
  EPX73119.1 2554 EKLINNLLYMNSCLIFCGPPGSGKSMTVLH 2583
                  789***********************9987 PP

>> Lebercilin  Ciliary protein causing Leber congenital amaurosis disease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3  14.1   0.00032       0.2      69     177 ..    3140    3247 ..    3135    3259 .. 0.84
   2 ?    3.6   0.5      0.07        45       9     107 ..    3359    3457 ..    3356    3459 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00032
  Lebercilin   69 vrvlrerlRksqekerelekklkekeaellrlkdklkklkkLsedknLaereeLqkkLeeleakleekeekikeLerkleleeksfrrqlaaekkkt 165 
                  +r lr rl + ++++++  kklk++e++++ lk+ l + +++ +dk+    ++L + L ++++++e +++++ +Ler+l+ ++++ + +     k  
  EPX73119.1 3140 IRKLRSRLYNEKDHVDNGLKKLKQTEQQIHVLKNMLYEQESVLNDKTKHANSRL-HNLMNAKQEVEIRQKEVLDLERNLRGQNEEIESKTSLVLKEL 3235
                  799****************************************9**99888888.579**********************99998877766555555 PP

  Lebercilin  166 keaqeevkalqe 177 
                  + ++  ++++++
  EPX73119.1 3236 SIVKPAIEEAKA 3247
                  555555555554 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.07
  Lebercilin    9 rllkikeLqnelaelqskleelrkEnklLkrlqkrqekaLskyedteaeLpqllarhneEvrvlrerlRksqekerelekklkekeaellrlkdklk 105 
                   l+ki  L++ +++l+ k e++++ +  +k +    +k+L   +++ a L   ++  + E+ +++++l++s +  +++ ++    e+ +++ +++l+
  EPX73119.1 3359 VLQKISPLNDSVSQLKAKGEDMQRKLSEVKSISEGLDKELMGMQEDYATLITEVHTLKIELANIQDKLKRSLKIIDDMASEKDYWENFMNSFDEALS 3455
                  5789999999999999999999999999999999999999999999999999999999999999999999998888888887777777777777766 PP

  Lebercilin  106 kl 107 
                  +l
  EPX73119.1 3456 NL 3457
                  65 PP

>> LRRFIP  LRRFIP family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   7.2    0.0006      0.38     118     191 ..    3167    3241 ..    3155    3271 .. 0.82
   2 ?    0.0   0.8      0.74   4.7e+02     133     177 ..    3391    3435 ..    3356    3452 .. 0.58

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.0006
      LRRFIP  118 evdlLkdkleeleeslaelqrelrekckelerlkrqlealkleldelkeklk.qrdeLiedhglvlveeeatdge 191 
                  ++ +Lk++l e+e  l +  ++++ +  +l + k+++e+ ++e+  l+ +l+ q +e+ ++ +lvl+e +  + +
  EPX73119.1 3167 QIHVLKNMLYEQESVLNDKTKHANSRLHNLMNAKQEVEIRQKEVLDLERNLRgQNEEIESKTSLVLKELSIVKPA 3241
                  899************************************************95677888999*999987766666 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.74
      LRRFIP  133 laelqrelrekckelerlkrqlealkleldelkeklkqrdeLied 177 
                     l +el   + ++ +l ++++ lk el+++++klk++ ++i d
  EPX73119.1 3391 SEGLDKELMGMQEDYATLITEVHTLKIELANIQDKLKRSLKIIDD 3435
                  222333333344455556666666666666666666655555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (4241 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1366  (0.0761894); expected 358.6 (0.02)
Passed bias filter:                      616  (0.0343577); expected 358.6 (0.02)
Passed Vit filter:                        77  (0.00429472); expected 17.9 (0.001)
Passed Fwd filter:                        37  (0.0020637); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              28  [number of targets reported over threshold]
# CPU time: 2.05u 0.44s 00:00:02.48 Elapsed: 00:00:00.64
# Mc/sec: 20123.03
//
Query:       EPX73120.1  [L=748]
Description: ATP-dependent RNA helicase Hca4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-47  160.2   0.0    8.9e-47  159.1   0.0    1.6  1  DEAD        DEAD/DEAH box helicase
    4.2e-24   85.0   0.2    3.4e-23   82.1   0.0    2.6  3  Helicase_C  Helicase conserved C-terminal domain
    1.1e-19   70.4   0.0    2.7e-19   69.2   0.0    1.7  1  DUF4217     Domain of unknown function (DUF4217)
    2.4e-08   34.2   1.1    6.1e-08   32.9   0.0    2.3  2  ResIII      Type III restriction enzyme, res subunit
  ------ inclusion threshold ------
       0.21   11.9   0.6        1.5    9.2   0.2    2.6  3  NAPRTase_N  Nicotinate phosphoribosyltransferase (NAPRTase) N


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.1   0.0   2.5e-50   8.9e-47       1     175 [.      63     232 ..      63     233 .. 0.96

  Alignments for each domain:
  == domain 1  score: 159.1 bits;  conditional E-value: 2.5e-50
                 -HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHS..TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   1 tdiQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyet..kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldng 97 
                 tdiQ++aip++l+g+d+l+aa+TGsGKTlafl+p+++++y++  ++ +g  ali++PtreLa qt+++l k++   + ++ liigg+++++++++l ++
  EPX73120.1  63 TDIQRQAIPEALKGRDILGAARTGSGKTLAFLVPLIENLYRRkwTQYDGLGALIISPTRELAIQTFETLVKVGRLHSFSAGLIIGGNNYKEERERL-SR 160
                 89***************************************98889****************************9999999***************.** PP

                 CSEEEEEHHHHHHHH.HCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHHHH CS
                 xxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  98 vdivvgtpgrlddll.stgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkdvkk 175
                 ++i+v tpgrl++++ +  ++++s++++++lDEadr+ld+gf+ ++++i+++l       +++rq++++SAT +k+v++
  EPX73120.1 161 MNILVCTPGRLLQHIdQAINFDTSNLQMVILDEADRILDMGFKSTLDAIVASL-------PKERQTMLFSATQTKSVRD 232
                 ***************6566688*******************************.......67899********998876 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       1.2   4.3e+03       8      47 ..     211     247 ..     204     261 .. 0.54
   2 !   82.1   0.0   9.5e-27   3.4e-23       2     110 ..     270     379 ..     269     380 .. 0.89
   3 ?   -3.8   0.0       4.5   1.6e+04      13      32 ..     575     595 ..     569     605 .. 0.65

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 1.2
                 HHHHHTTTTSEEEEEESSHH.HHHH.HHHHHHHTTSTEEEES CS
  Helicase_C   8 ellkleeeggkilifvntid.rlek.vklllekkgikvavlh 47 
                 + l    +++++++f+ t++ ++ + ++l l+  + +++++h
  EPX73120.1 211 ASL---PKERQTMLFSATQTkSVRDlARLSLQ--NPEYIAVH 247
                 444...56788888888888444333343332..33444444 PP

  == domain 2  score: 82.1 bits;  conditional E-value: 9.5e-27
                 HHHHHHHHHHHTTTTSEEEEEESSHHHHHH.HHHHHHHT.....TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSS CS
  Helicase_C   2 kleallellkleeeggkilifvntidrlek.vklllekk.....gikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlp 94 
                 kl++l  ++ +++ ++k+++f+ +++++   ++     +     g+    lhg+ +q +r ei ++f + +  +L +td+++rG+d+p v+ V+++d p
  EPX73120.1 270 KLDILFGFI-RTHLKNKSIVFLSSCKQVRFvFET----FrrlrpGVPLMHLHGKQKQASRTEITAKFTASQNAILFCTDIVARGLDFPAVDWVVQLDTP 363
                 677777777.88999***********99545444....333558***********************999988************************** PP

                 SSHHHHHHHHTTSSST CS
  Helicase_C  95 rnvtsyiqriGRtgRa 110
                 ++v++yi+r+GRt+R+
  EPX73120.1 364 EDVDTYIHRVGRTARF 379
                 ***************7 PP

  == domain 3  score: -3.8 bits;  conditional E-value: 4.5
                 TTTTSEEEEEESSHHHHHH.H CS
  Helicase_C  13 eeeggkilifvntidrlek.v 32 
                 e+e++k +i +++++rl    
  EPX73120.1 575 EAEENKLIINSKRKERLAAsK 595
                 566778888888888775443 PP

>> DUF4217  Domain of unknown function (DUF4217)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.2   0.0   7.4e-23   2.7e-19       1      61 []     420     480 ..     420     480 .. 0.99

  Alignments for each domain:
  == domain 1  score: 69.2 bits;  conditional E-value: 7.4e-23
     DUF4217   1 iqqkleslcakdrdlkelAqkAfvsyvraYsvhlake..iFrvkkLdlealAksfGLleaPki 61 
                 i+++l++lc+k+ d+k+l+qk f+sy+r  sv+l+k+  +F+++kL++ea+A s+GL+++Pki
  EPX73120.1 420 IRNQLQNLCFKENDIKYLGQKSFISYLR--SVYLQKDkeVFQFDKLPFEAYADSLGLPGTPKI 480
                 799*************************..********************************8 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.9   0.0   1.7e-11   6.1e-08       6     168 ..      64     225 ..      47     228 .. 0.85
   2 ?   -2.1   0.4      0.94   3.4e+03     110     121 ..     542     553 ..     484     613 .. 0.50

  Alignments for each domain:
  == domain 1  score: 32.9 bits;  conditional E-value: 1.7e-11
                 HHHHHHHHHHT......TTSEEEEEESTTSTHHHHH.HHHHHHH-S.........-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--... CS
      ResIII   6 eyQeeaienlleklkskrdkrglikmaTGtGKTlva.aklierllkkgkee....kflflvprkslleqtleefkkflseaykeigkkvsgdkkkakek 99 
                 + Q +ai + l+       + +l ++ TG+GKTl   + lie+l++ ++ +     +l++ p+++l  qt e++ k+   +  ++g ++ g+++k++++
  EPX73120.1  64 DIQRQAIPEALK------GRDILGAARTGSGKTLAFlVPLIENLYRRKWTQydglGALIISPTRELAIQTFETLVKVGRLHSFSAGLIIGGNNYKEERE 156
                 555555555553......345778899*******99899*******999999**************************999988************999 PP

                 ....-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS....TTTHHHHHT-.--SEEEEEESS CS
      ResIII 100 dstnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgak...kswreilekf.keavllglTAT 168
                 + + ++ilv t  +l +++     +   ++ ++ +++i DEa r+ ++   ++  +i+ ++ ke   + ++AT
  EPX73120.1 157 RLSRMNILVCTPGRLLQHI----DQAINFDTSNLQMVILDEADRILDMgfkSTLDAIVASLpKERQTMLFSAT 225
                 9******************....788899999999************86654677765555456777778888 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.94
                 EHHHHHHTH... CS
      ResIII 110 tiqsldadseee 121
                   q+l ++ e +
  EPX73120.1 542 HRQKLVERDEGD 553
                 333333333222 PP

>> NAPRTase_N  Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       1.3   4.6e+03      20     116 ..     295     325 ..     281     340 .. 0.53
   2 ?   -1.2   0.0      0.72   2.6e+03      71      95 ..     392     416 ..     354     422 .. 0.83
   3 ?    9.2   0.2   0.00041       1.5      49      95 ..     422     462 ..     403     481 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 1.3
  NAPRTase_N  20 dvevvfelffRkkpfkgeyaivagleevieylenlrfteeeieyLkrklpyfkedfleyLrtfrfkpsevaveeeevvfpgepeirveGpwieaill 116
                 +v+ vfe f R  p                                                                  g p +  +G+  +a   
  EPX73120.1 295 QVRFVFETFRRLRP------------------------------------------------------------------GVPLMHLHGKQKQASRT 325
                 45555555555555..................................................................44444444444444333 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.72
  NAPRTase_N  71 fkedfleyLrtfrfkpsevaveeee 95 
                  +e+fl+ L++ +++ ++++++e++
  EPX73120.1 392 SEEAFLKRLESKKISVERINIKEGK 416
                 5799***********9999999986 PP

  == domain 3  score: 9.2 bits;  conditional E-value: 0.00041
  NAPRTase_N  49 eylenlrfteeeieyLkrklpyfkedfleyLrtfrfkpsevaveeee 95 
                 ++l+nl f+e++i+yL       +++f++yLr++ +++++  ++ ++
  EPX73120.1 422 NQLQNLCFKENDIKYLG------QKSFISYLRSVYLQKDKEVFQFDK 462
                 589*************9......899*******99999886666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (748 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1409  (0.0785878); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.88u 0.34s 00:00:01.22 Elapsed: 00:00:00.57
# Mc/sec: 3924.85
//
Query:       EPX73121.1  [L=536]
Description: tRNA nucleotidyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-27   97.0   0.1    2.5e-27   95.8   0.0    1.7  2  PolyA_pol        Poly A polymerase head domain
    2.4e-09   36.8   0.0    6.1e-09   35.5   0.0    1.7  1  PolyA_pol_RNAbd  Probable RNA and SrmB- binding site of polym
      0.009   16.0   0.4      0.043   13.8   0.4    2.1  1  tRNA_NucTran2_2  tRNA nucleotidyltransferase domain 2 putativ


Domain annotation for each model (and alignments):
>> PolyA_pol  Poly A polymerase head domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       2.5   1.5e+04      98     114 ..      40      56 ..      36      57 .. 0.84
   2 !   95.8   0.0   4.1e-31   2.5e-27       1     126 []      73     213 ..      73     213 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 2.5
                 GGS-EEECTTTCEE-TT CS
   PolyA_pol  98 iNalaynlnkgkvlDlf 114
                  N++ +n +++++ Dlf
  EPX73121.1  40 ANSITLNKSEQQLTDLF 56 
                 59999999999999986 PP

  == domain 2  score: 95.8 bits;  conditional E-value: 4.1e-31
                 EEEETHHHHHHHTT---CEEEEEEC.S-HHHHHHHHHHHHT-EEEEETTTTCCCCEECCEE...EEECCEECEEEEEE---SSHHH............. CS
   PolyA_pol   1 lylvGGaVRDlllgkepkDvDlatd.aapeelakllrkkvkeallsgeefqtiavlekkql...levatfRlekdesdarnpesekste.......... 85 
                 l+++GG+VRD+llg e++D+D+a+d + +  +ak l+  ++ + + + + +++++  + ++   le+at+++  + +d++n +  ++++          
  EPX73121.1  73 LRFAGGWVRDKLLGIESHDIDVAVDcMPGYDFAKHLQAYMQSN-HPEYKTRIVKIDANPEKskhLETATAKILGKDIDFVNLRPHTFSNshlhldnsif 170
                 5899*********************656688999999999883.33555555555544433446**********************9999********* PP

                 .HHHHHHCTSSBGGGS-EEECTTTCEE-TTS.HHHHHHTTEE- CS
   PolyA_pol  86 .sleeDlkrRDftiNalaynlnkgkvlDlfg.GikdLkskvir 126
                  +  eD+ rRD tiNal+ynl +++v+D+++ G++dL+skvir
  EPX73121.1 171 gTPLEDALRRDATINALFYNLRTKQVEDYTEnGLSDLESKVIR 213
                 ******************************99*********97 PP

>> PolyA_pol_RNAbd  Probable RNA and SrmB- binding site of polymerase A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.5   0.0     1e-12   6.1e-09       1      59 [.     240     302 ..     240     305 .. 0.91

  Alignments for each domain:
  == domain 1  score: 35.5 bits;  conditional E-value: 1e-12
  PolyA_pol_RNAbd   1 gFtIepeTaaairklap...lLkkispeRifeEllKlLlsghpeaglelLretgLlkylf.Pe 59 
                      +F+I+p+T++a++ +     l + is eRi +E++K+L++ + +++++   ++gL++++f P 
       EPX73121.1 240 NFEIHPDTFSALKNHILhdrLRSSISRERIGVEIDKILSHCDTSRAFRIIHNSGLFAPIFgPL 302
                      7*************9877755568************************************665 PP

>> tRNA_NucTran2_2  tRNA nucleotidyltransferase domain 2 putative
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.4   7.1e-06     0.043      98     128 ..     467     507 ..     375     511 .. 0.58

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 7.1e-06
  tRNA_NucTran2_2  98 k...........skkeLaitGkdLlealgvkpGpwlgeiLke 128
                      k           s ++  ++Gk+L   l++kpGp l+e+L+e
       EPX73121.1 467 KnienydlaeaySMQPV-LNGKELSSLLNIKPGPHLKEMLEE 507
                      24545555544466666.9*********************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (536 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       706  (0.0393775); expected 358.6 (0.02)
Passed bias filter:                      500  (0.0278878); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.67u 0.35s 00:00:01.02 Elapsed: 00:00:00.53
# Mc/sec: 3033.98
//
Query:       EPX73122.1  [L=836]
Description: inositol polyphosphate phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-71  241.2   0.0    4.3e-71  239.9   0.0    1.7  2  Syja_N    SacI homology domain


Domain annotation for each model (and alignments):
>> Syja_N  SacI homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  239.9   0.0   2.4e-75   4.3e-71       1     319 [.      85     386 ..      85     387 .. 0.88
   2 ?   -2.8   0.0      0.17   3.1e+03     260     308 ..     480     527 ..     467     545 .. 0.70

  Alignments for each domain:
  == domain 1  score: 239.9 bits;  conditional E-value: 2.4e-75
      Syja_N   1 ygilGlirllsgsyllvitkreevgtlkgkkeiykitevellplsseeeaekalkslkaktekkkeekeleekllklleklfessgsfYFsydlDltrs 99 
                 y+ilGl+r+ s++yl +   r++v+ ++g+ +iy+++++++++l+ +                +++++  e+k l+ + + +   ++fY+sy++Dl+++
  EPX73122.1  85 YAILGLTRFTSSYYLYLCIARKTVAVIGGH-SIYHVDNTRFIELYPN----------------RRNQSYIERKCLSSI-EKVDLARTFYYSYSYDLSQT 165
                 78******999***************9665.************9544................123445688899999.677899************** PP

      Syja_N 100 lqrqlekssesskslplweraderFvWNrhllkpliea..eldswllpviqGfveqsklklsksqkekekkevtltlisRrsrkraGtRylrRGiddeG 196
                 lq + ++   + ++     ++++ FvWN ++l+p++++   ++ w++p+i+Gfv q+kl++        +k + +tli+Rrsr++aG+R+lrRGi d+G
  EPX73122.1 166 LQYSFTH---PIPKH----QVRDMFVWNWSMLQPILDTvgIDSPWCIPLIHGFVDQAKLSV-------YGKPIIVTLIARRSRHFAGARFLRRGIRDDG 250
                 **99986...44444....56788**********997777899***********8888864.......5688*************************** PP

      Syja_N 197 nvANfvEtEqileves.........sekeskilSfvqiRGSiPlfWsqeptlky.kpkirierseeenleafkkHfekllkrYg.kvvvvnLl...ekk 281
                 +vAN+vEtEqi+ + s         +++   ++S+vq+RGSiPl Wsqe ++   kp+i i+  ++   +a++ Hf++l+ +Yg +++v+nL+   ek 
  EPX73122.1 251 YVANEVETEQIVFDGSvssfpvsssAPGIPCYTSYVQHRGSIPLRWSQEFSNITpKPPIGIT-VNDPFYSAAALHFDRLFGHYGaPCIVLNLVksnEKV 348
                 *************77799****9996776789****************99755578888886.6667999**************99*******996666 PP

      Syja_N 282 grEkkLgeayekavkklnk.lekekkklkyveFDfhkec 319
                 +rE+ L +++e a+++ln+ l + +kk++y+ +D++++ 
  EPX73122.1 349 KRESLLLNEFEWAINYLNQfL-DPSKKIQYIGWDMSAAS 386
                 99****************976.5679*********9876 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.17
      Syja_N 260 kHfekllkrYgkvvvvnLlekkgrEkkLgeayekavkklnk.lekekkkl 308
                  H + +  +Yg   +vn l++ ++ ++ +++ +++++++++    +++ +
  EPX73122.1 480 GHGDTIALQYGGSLLVNTLDTYRKNNQWSSTSRDLIESVKRfY--SNSFV 527
                 5777777788888888888877777777777777777776433..23334 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (836 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       851  (0.047465); expected 358.6 (0.02)
Passed bias filter:                      468  (0.026103); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.79u 0.35s 00:00:01.14 Elapsed: 00:00:00.54
# Mc/sec: 4644.29
//
Query:       EPX73123.1  [L=925]
Description: meiotically up-regulated 24 protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-14   52.9   0.1      5e-05   23.0   0.0    3.8  3  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0   3.9e-05       0.7       3      59 ..     220     271 ..     218     276 .. 0.95
   2 !   15.5   0.0   6.1e-07     0.011       1      62 [.     697     752 ..     697     761 .. 0.89
   3 !   23.0   0.0   2.8e-09     5e-05       9      65 ..     796     848 ..     794     853 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 3.9e-05
                 EESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHH CS
       RRM_1   3 VgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAleal 59 
                 ++++p+d +e  L ++    G+ + i+++r+     ++  +V + s  dA +++++l
  EPX73123.1 220 ITGFPSDFDEAALFQYVCSLGKAELISVSRN-----TNSIYVHYLSITDALHCIDSL 271
                 899***************************6.....******************987 PP

  == domain 2  score: 15.5 bits;  conditional E-value: 6.1e-07
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngk 62 
                 lf++ +++ +++ e+++lF+ f  i++++ +++     k+++fV+F  + dA+  lea +++
  EPX73123.1 697 LFLSKIHKAAKQPEISRLFQMFP-IEEVRHFPK-----KRMCFVTFLESYDAKIFLEAHQKQ 752
                 788999999*************6.66******8.....***************999977765 PP

  == domain 3  score: 23.0 bits;  conditional E-value: 2.8e-09
                 TSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTT.EEET CS
       RRM_1   9 dvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealng.kklg 65 
                 + t++eL  +F+k+G+i+s+   ++      + + V++ s   A kA+e+l+   +++
  EPX73123.1 796 SFTRSELVSVFKKYGDIESFLFTKK-----SNSGSVTYSSIYGAIKAMESLQShSTFQ 848
                 7899*************99999997.....*********************9955554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (925 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1180  (0.0658152); expected 358.6 (0.02)
Passed bias filter:                      263  (0.014669); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.28s 00:00:00.93 Elapsed: 00:00:00.43
# Mc/sec: 6427.81
//
Query:       EPX73124.1  [L=506]
Description: glucosyltransferase Alg6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   6.2e-137  457.5  42.8   8.6e-137  457.0  42.8    1.0  1  Alg6_Alg8  ALG6, ALG8 glycosyltransferase family
  ------ inclusion threshold ------
        1.3    8.8  16.1      0.093   12.5   2.4    3.1  3  DUF2238    Predicted membrane protein (DUF2238)


Domain annotation for each model (and alignments):
>> Alg6_Alg8  ALG6, ALG8 glycosyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  457.0  42.8  9.6e-141  8.6e-137       2     484 .]      36     484 ..      31     484 .. 0.92

  Alignments for each domain:
  == domain 1  score: 457.0 bits;  conditional E-value: 9.6e-141
   Alg6_Alg8   2 lllklll..........ipmyrStDFEvqRnWlaiThslplseWytedlseWtLDYPPlfAYfeyllskvakkvldpemlalessrgyesestklFqRl 90 
                 +++++l+          +pmy  +DFE+qR+W+++T + p+s+Wy+edl++W+LDYPPl+AY+++l++ +++ ++dp+++a  ssrg+es ++kl++R+
  EPX73124.1  36 VFMQWLIsigsysgrnsPPMY--GDFEAQRHWMELTLHSPVSKWYFEDLEWWGLDYPPLTAYVSLLFGFIGHYFFDPKWFAHISSRGFESLDLKLYMRA 132
                 56777778888889999****..**********************************************************99**************** PP

   Alg6_Alg8  91 tVivsdlllfipavlllvek.akkks..kkkkrlvllllillspgllliDhiHFQYNgvllGllllsiaallkkkdlllgallFvllLnfKqialylAp 186
                 tVi+s ll+++p ++++ +  ++  +  +  +r +ll+++l++p+llliDh+HFQYN+v+lGl++++ia+llk++++ ++ +lF+l+L+fKq++ly+Ap
  EPX73124.1 133 TVILSHLLILVPPLIFYSKWwSR--RvpDFVERNALLVMVLFQPALLLIDHGHFQYNCVMLGLVMYAIANLLKNQYV-IATFLFCLALSFKQMTLYFAP 228
                 ************99999644333..145899999*******************************************.6******************** PP

   Alg6_Alg8 187 ayfvylLrkyclkkskkklkvslkrllklgvvvlavfallfgPflas..geqlkqvlsRlFPfkRGLfedyvApNfWalynvvdkvlevvlkkaevasl 283
                  +f+ylL+ + +k      +++++rll lg++v+++f+++f P+++   + ql+qv++R+FPf+RGLfed+vA NfW+++n+++kv+e           
  EPX73124.1 229 SIFAYLLGVC-FK-----PHFQFSRLLGLGITVITTFCIVFSPWIYIdfKVQLPQVVHRMFPFARGLFEDKVA-NFWCAVNTLFKVKE----------- 309
                 ********99.84.....478************************555677**********************.**************........... PP

   Alg6_Alg8 284 trglvqdvsflvlpeilpkltllltllailpslvklllkpskklfllalvlcalsfFlfsfhVHEKaiLlvllpltllalesre.dlslvlllsvvgtf 381
                            ++ ++l+ l+ll+tl++ilps+  l+l+p+k+l+ l ++++a++fFlfsf+VHEK++L++ll +++++++ ++ + s+++l+++vg+f
  EPX73124.1 310 ----------YFTMKQLQSLSLLFTLISILPSCSVLFLYPRKRLLALGFANAAWGFFLFSFQVHEKSVLIPLLLTSVILCHGHStTKSWIALANNVGMF 398
                 ..........99999**********************************************************999988866654889999******** PP

   Alg6_Alg8 382 slfPLlfkdgellikvvltllwllllllslkklvkkslkkkkkkvlldrleklyllsllallvllvllellvlkkpperlpflplllisvycsvgvfvl 480
                 sl+PLl+kd++ l+ ++++++w+++  +    +++k+       ++++    l +  +la+++l+  l+ +v  +pp+r+p+l+++l++++ s++ f++
  EPX73124.1 399 SLWPLLKKDNLGLQFFTVLFMWNWIGHM---FVFSKN-------IIFRY---LQISFYLAMVILF-ALDIFV--APPSRYPDLWVVLNVIL-SFAGFLI 480
                 *************************997...333322.......33333...5667777677888.899999..799**************.9999999 PP

   Alg6_Alg8 481 flll 484
                 ++l+
  EPX73124.1 481 IYLW 484
                 8876 PP

>> DUF2238  Predicted membrane protein (DUF2238)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.9    0.0021        19      18      59 ..     165     206 ..     147     228 .. 0.80
   2 ?   12.5   2.4     1e-05     0.093       5     101 ..     234     333 ..     229     338 .. 0.81
   3 ?   -1.5   0.4      0.22     2e+03      32      67 ..     422     442 ..     400     487 .. 0.61

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.0021
     DUF2238  18 nlayllillflvlhlvGghYtYaevplddwlkelfglernkY 59 
                 +l++++++  ++l++  gh+ Y+ v l+ ++ ++ +l +n+Y
  EPX73124.1 165 ALLVMVLFQPALLLIDHGHFQYNCVMLGLVMYAIANLLKNQY 206
                 45666777778889999************************9 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 1e-05
     DUF2238   5 lllvltyrrfrlsnlayllillflvlhlvGghYtYa..evplddwlkelfglernkY.DrlvHfaqGlllalvvrelllrkkklrkwllllavlvvlai 100
                 ll v+++ +f++s+l+ l i+++++  +v + ++Y   +v l ++++++f ++r  + D++++f + + + + v e+++ k+  +  ll+  ++++ ++
  EPX73124.1 234 LLGVCFKPHFQFSRLLGLGITVITTFCIVFSPWIYIdfKVQLPQVVHRMFPFARGLFeDKVANFWCAVNTLFKVKEYFTMKQLQSLSLLFTLISILPSC 332
                 455677889**************************733577889***********9989******************9998887544555555555555 PP

     DUF2238 101 s 101
                 s
  EPX73124.1 333 S 333
                 5 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 0.22
     DUF2238  32 lvGghYtYaevplddwlkelfglernkYDrlvHfaq 67 
                  +G  +++++  ++ +                  ++
  EPX73124.1 422 WIGHMFVFSKNIIFRY---------------LQISF 442
                 3333344444333333...............33333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (506 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       772  (0.0430587); expected 358.6 (0.02)
Passed bias filter:                      264  (0.0147247); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3501.26
//
Query:       EPX73125.1  [L=1139]
Description: rho-type GTPase activating protein Rga1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.5e-36  124.0   0.0    9.1e-36  123.0   0.0    1.5  1  RhoGAP           RhoGAP domain
    4.3e-24   84.5  40.8    1.8e-11   44.0   5.3    5.6  5  LIM              LIM domain
  ------ inclusion threshold ------
       0.11   12.7   1.2       0.94    9.7   0.4    2.4  2  YopE_N           YopE, N terminal
       0.19   11.3   2.9       0.34   10.5   2.5    1.5  1  Rubella_Capsid   Rubella capsid protein


Domain annotation for each model (and alignments):
>> RhoGAP  RhoGAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.0   0.0     2e-39   9.1e-36       1     148 [.     850    1001 ..     850    1005 .. 0.98

  Alignments for each domain:
  == domain 1  score: 123.0 bits;  conditional E-value: 2e-39
                  BHHHHHHHHHHHHHTTTSTTTTTS-S-HHHHHHHHHHHHHTGGGCTTTTTSCHHHHHHHHHHHHHHSSSTTTTGGHHHHHHHHHTSSSHHHHHHHHH CS
      RhoGAP    1 PiivekcvefiekrgldtegiyRvsgskarvkelreafdkgkavdsdleeedvhavaslLKrfLrelpepLltkelyeelieaaksedeeerlealk 97  
                  P ++++ +++++k+++ ++g++R++g+ +r+kel + +d  +++  + e+e++ ++a+lLK+fLrelp+pLlt++l+  +i   k e+eeerl+ l+
  EPX73125.1  850 PTFIDNTIAAMKKKDMSVVGVFRKNGNIRRLKELSDLLDISPESI-NYEQESPIQLAALLKKFLRELPDPLLTFKLFGLFITSSKLESEEERLRVLH 945 
                  899****************************************97.************************************99************* PP

                  HHHTTS-HHHHHHHHHHHHHHHHHHHTHHH.....H---HHHHHHHHHHHHHT-TS CS
      RhoGAP   98 ellekLPkenrdtLryLlehLkrvaenske.....nkMtaknLaivfaPtLlrpks 148 
                   ++  LPk +rdt+++++ +L +va+ s+       kM+++nLa+v++P++l +ks
  EPX73125.1  946 LTICLLPKGHRDTMEVIFGFLFWVASFSHIddevgSKMDIHNLATVITPNILYSKS 1001
                  *****************************9999*******************9976 PP

>> LIM  LIM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.4   2.0   2.4e-13   1.1e-09       1      57 [.     113     172 ..     113     173 .. 0.87
   2 !   44.0   5.3   4.1e-15   1.8e-11       1      56 [.     177     231 ..     177     233 .. 0.95
   3 !    5.3   0.2    0.0052        23       1      26 [.     237     264 ..     237     267 .. 0.77
   4 ?   -0.4   0.0       0.3   1.4e+03      40      52 ..     370     383 ..     365     385 .. 0.82
   5 !   12.1   9.8     4e-05      0.18       1      40 [.     480     517 ..     480     539 .. 0.77

  Alignments for each domain:
  == domain 1  score: 38.4 bits;  conditional E-value: 2.4e-13
                 -TTT--BE-TTTEEEEETTEEEETTTSB-TTT-SB-CTT.CEEETT.E.....EEEHHHHHHH CS
         LIM   1 CagCnkkiadrelvlkaldkvwHeeCFtCsdCqkeLkegsfyekdg.k.....lyCkkdylkk 57 
                 C +Cn++ia++++   al++v+H eCF+C dC++  + + f+ +++       ++C++dy+++
  EPX73125.1 113 CGACNQTIASQYVR--ALGNVFHLECFKCYDCGTMVACK-FFPINApSpsgqvPLCETDYFRR 172
                 9********55555..******************99999.7888874478889*******986 PP

  == domain 2  score: 44.0 bits;  conditional E-value: 4.1e-15
                 -TTT--BE-TTTEEEEETTEEEETTTSB-TTT-SB-CTT..CEEETTEEEEHHHHHH CS
         LIM   1 CagCnkkiadrelvlkaldkvwHeeCFtCsdCqkeLkegs.fyekdgklyCkkdylk 56 
                 Ca+C+   +  +++  al+k++H+e+FtC+ C + + +++ +ye++g++yC+++y +
  EPX73125.1 177 CANCGMALRGYYIT--ALNKKYHIEHFTCTLCITIFGPNDsYYEHEGEVYCHYHYST 231
                 *********88888..***************************************86 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.0052
                 -TTT--BE-TTTEEEEETT..EEEETTT CS
         LIM   1 CagCnkkiadrelvlkald..kvwHeeC 26 
                 C+gC+ +i ++ + +  ++  ++wH+ C
  EPX73125.1 237 CYGCDGPILKQFVEIYRNGafQNWHVPC 264
                 *********88776544333389**999 PP

  == domain 4  score: -0.4 bits;  conditional E-value: 0.3
                 ..CEEETTEEEEHH CS
         LIM  40 s.fyekdgklyCkk 52 
                 s +y++++kl+Ckk
  EPX73125.1 370 SmPYIREAKLLCKK 383
                 34899*******96 PP

  == domain 5  score: 12.1 bits;  conditional E-value: 4e-05
                 -TTT--BE-TTTEEEEETTEEEETTTSB-TTT-SB-CTT. CS
         LIM   1 CagCnkkiadrelvlkaldkvwHeeCFtCsdCqkeLkegs 40 
                 C+ C+   ++++++  + dk++H+ C+ C++C+ + +e++
  EPX73125.1 480 CYVCHTALEEDCIL--VDDKHFHIGCLSCAKCGYTNRENY 517
                 99*******99999..9***************97655555 PP

>> YopE_N  YopE, N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.4   0.00021      0.94      72     112 ..      59      99 ..      40     110 .. 0.84
   2 ?    0.6   0.0      0.14   6.1e+02     100     125 ..     741     766 ..     721     767 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00021
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXX--HHHHHHHHHHH CS
      YopE_N  72 gfiqrmfsegshkpvvtpaptpaqmpsptsfsdsikqlaae 112
                 g+ +r  s  s kp+  pa  pa++ps +s   s+k+  + 
  EPX73125.1  59 GLSRRHTSAESRKPIPKPASIPARIPSDSSEQLSLKRSETL 99 
                 667889999********************999999875544 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.14
                 --HHHHHHHHHHHHHHHHHHHHCT-- CS
      YopE_N 100 tsfsdsikqlaaetlpkymqqlnsld 125
                 +s  ++ik  + et  +y+ +lnsl+
  EPX73125.1 741 SSGQQTIKTPSVETPARYLSELNSLE 766
                 566789999***************96 PP

>> Rubella_Capsid  Rubella capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   2.5   7.5e-05      0.34      88     135 ..      15      62 ..       6      80 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 7.5e-05
                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Rubella_Capsid  88 rsqtpapkpsrappqqpqpprmqtgrggsaprpelgpptnpfqaavar 135
                      s t + kp r p +qpq      gr  s  r  + p  npf   ++r
      EPX73125.1  15 NSGTVSTKPRRLPTKQPQDRNAAFGRSSSKVRNSVVPEHNPFAPGLSR 62 
                     678999************************************987776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1139 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       676  (0.0377043); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.77u 0.26s 00:00:01.03 Elapsed: 00:00:00.46
# Mc/sec: 7514.27
//
Query:       EPX73126.1  [L=836]
Description: U3 snoRNP protein Nop14 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   5.8e-236  785.8  49.5     6e-135  451.6   4.5    2.0  2  Nop14           Nop14-like family
  ------ inclusion threshold ------
        3.8    8.2  17.3         14    6.4   2.1    3.7  3  Cytochrom_B562  Cytochrome b562


Domain annotation for each model (and alignments):
>> Nop14  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  339.9  37.7  3.9e-105  3.5e-101       2     312 ..      46     343 ..      45     362 .. 0.88
   2 !  451.6   4.5  6.7e-139    6e-135     391     872 ..     361     832 ..     354     835 .. 0.89

  Alignments for each domain:
  == domain 1  score: 339.9 bits;  conditional E-value: 3.9e-105
       Nop14   2 esirekfNpFevkvnkeKfeVlgrkvkgekgrpgvsrskaeekRkktLlkeyqrrnKsggflDrRfGEnDptmtpeekmleRfarEkqrkakkkslFnL 100
                 ++i+++fN F+++++++Kf+V gr+ kg++g pgvsrs +ee Rk+t+++ ++++n++gg++DrRfGEn+p+++ e+kmleRf+rE+qr+ +kk+++nL
  EPX73126.1  46 DKIQSDFNLFDRQFTRKKFDVGGRRIKGTEGTPGVSRSVGEEIRKNTIGEKLKKKNHVGGVIDRRFGENNPHLSLEDKMLERFSREQQRR-SKKDMYNL 143
                 5899**************************************************************************************.******** PP

       Nop14 101 eddeeeeLtHyGqsLselddfddedl.edddddeeeeegkldakrvreahfgggedeeeee..eeeeperkkskkevmeEvIaKSKlhKaeRqkekeed 196
                 + ++++ LtH+ + +selddfd+ dl   + +    e++ l++++vr++hfgg++++e +e  ee+ep++kksk+evm+E+IaKSK+hKaeRq+ek+e 
  EPX73126.1 144 DSENDV-LTHGKRPISELDDFDEPDLaL-NAE----EDEGLNNEVVRRMHFGGFGEDEPQEeeEEGEPKQKKSKHEVMSEIIAKSKTHKAERQAEKDEY 236
                 977664.*****************9843.444....3446999************9999888899********************************** PP

       Nop14 197 eelreeLDkelkdlrsllsstkkpkseeakkeeekekkekksagkdkeeaddeYDklvreLafdkRAkPsdRtKteEElakeekerLeklEeeRlkRMr 295
                 e+ re+LD+ ++dl+s ls+ +k++++++ +++         +  + ++ad++YD++vre++fd+RA+Ps+RtKteEEla+ e++rL++lE++Rl+RM+
  EPX73126.1 237 EDEREKLDEGMDDLQSALSDFRKEARRKQAAKN---------QVLRPSDADSRYDEFVREMVFDRRARPSERTKTEEELAQIEADRLRELEDQRLARMQ 326
                 *******************98877764433333.........3567789************************************************** PP

       Nop14 296 ge.....edeeeeeekkkkkkk 312
                  +     e     +e +++ ++
  EPX73126.1 327 DDeidypE-----TEVTEDAST 343
                 98544331.....322222222 PP

  == domain 2  score: 451.6 bits;  conditional E-value: 6.7e-139
       Nop14 391 ededdlsdleseeeeeedeleeelleeekkaaeekkekk.....kkkkkseekakeelpytfpcPesheellellekreisaedlptvvqRIralhhps 484
                 e++ ++s+ e+ee+eee e + e ++  +k++ +k   +      + ++ + +++++l+yt++cP+sh+e+l +++  ++s ed+ tvv RIr+l+h++
  EPX73126.1 361 EESVNSSEGEEEEDEEEWEGIVEDTKPAAKNDVKK---EkklsgGNISDGKPAKQASLAYTYSCPTSHKEFLGMIQ--GLSFEDQVTVVIRIRTLYHVK 454
                 22222222222233333333333333333333333...234677667777777889********************..66******************* PP

       Nop14 485 LaeeNKeklqkflavLlqhiaylasqeeappfailesLvrhlhsLaksfpeeaaeafrekLkemqkelekklakgkkktwPslsdLilLkligliFptS 583
                 L++eNK++l++f+ vLlqhi+yl +++e  +++ile+L++hl+sL ++fp +++ +f ++L+ m+++l +++ +  + ++P+ +dL+l++l  ++FptS
  EPX73126.1 455 LHPENKARLENFTVVLLQHILYLSKKSE-VSMEILEKLTEHLVSLGRQFPVTISASFISVLEGMRNRLLNSFGNT-NIKFPDAQDLTLFNLACSVFPTS 551
                 **************************99.56***********************************888877776.99********************* PP

       Nop14 584 DfrHpVvtPallliaeyLgqarirslsdlasglflctlvlqyqslSkRyvPEvinfllnlllllapkkskkkvpgvfpvkevkpsellelkeleekskk 682
                 D +H V  P++l+++e+L+q++ ++l dl+ +l+l++l+l+yq+lS+Ry+PEvi  l ++l++l+p+++k ++pg+f+++++  +e+ +   +++ s +
  EPX73126.1 552 DRKHIVLNPMVLTMCEALTQSPWSTLPDLCNKLYLANLLLKYQRLSHRYIPEVIVLLGQVLYVLSPNAMK-SIPGSFTIPDSL-HEKHKAFGIQDISLD 648
                 ******************************************************************9888.**********76.554566667765554 PP

       Nop14 683 ekkqrklslsdllkeesskeeseqlklsllstalsllekfaelyseksafveifepilkllkklklkkkklpeelqekleellaklerllkkalesRrp 781
                   + +kl+l dl +        ++l+ s++ ++l+l++ +++ly+++saf ei+epi +ll+ +++kk+ l+++l++kl++++ +l++ll++a+++R+p
  EPX73126.1 649 --EPEKLRLLDLGS-----VPVSNLQSSIIMVTLNLVNVAQNLYAKESAFLEIYEPIFDLLQVYESKKELLHKTLSDKLKQTIGDLTTLLESAKRTRKP 740
                 ..4599*****988.....55678*************************************************************************** PP

       Nop14 782 LelqkhkplaiktlePkFeeeydpdkk.ydpdreraelaKLkaelKkErKGAiRELRKDaqFlareklkekkekdaeyekkvkrivaelqse 872
                 L+lq+h+p+ i+++ PkFee y+ dk  yd d erae +KL+a+++  +KGAiR LRKDa+++arek+ke++ kd++y++k+ +++++lq+ 
  EPX73126.1 741 LALQAHRPVGIASHLPKFEEGYSIDKTsYDIDPERAEHNKLRAQHRDAKKGAIRTLRKDARYIAREKQKEQRSKDKAYNDKMGKLHNRLQHF 832
                 *****************************************************************************************986 PP

>> Cytochrom_B562  Cytochrome b562
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   5.0    0.0035        31      24      78 ..     207     264 ..     197     273 .. 0.78
   2 ?    1.8   0.0     0.043   3.9e+02      14      44 ..     709     739 ..     702     762 .. 0.83
   3 ?    6.4   2.1    0.0015        14      22      74 ..     771     835 ..     759     836 .] 0.86

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0035
  Cytochrom_B562  24 elkkalkelraaaedakeatpsklek...dseeqkdYqeGldklidqldkaealakag 78 
                     + k++ + + ++ +++k+ +++  ++    + e ++ +eG+d+l+++l + +++a   
      EPX73126.1 207 QKKSKHEVMSEIIAKSKTHKAERQAEkdeYEDEREKLDEGMDDLQSALSDFRKEARRK 264
                     55667777888888888888866665677788999***************99998754 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.043
  Cytochrom_B562  14 kqvakaddaeelkkalkelraaaedakeatp 44 
                     k++ + + +++lk+++ +l+++ e+ak+++ 
      EPX73126.1 709 KELLHKTLSDKLKQTIGDLTTLLESAKRTRK 739
                     6777888899*****************9764 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.0015
  Cytochrom_B562  22 aeelkkalkelraaaedakeatpsklek............dseeqkdYqeGldklidqldkaeal 74 
                     ++  +++ ++lra+  dak++ +++l+k            ++++ k+Y++ + kl++ l+  +++
      EPX73126.1 771 IDPERAEHNKLRAQHRDAKKGAIRTLRKdaryiarekqkeQRSKDKAYNDKMGKLHNRLQHFDSA 835
                     555567788999999999999999999999999999998899999************99998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (836 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1986  (0.11077); expected 358.6 (0.02)
Passed bias filter:                      632  (0.0352502); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.88u 0.32s 00:00:01.20 Elapsed: 00:00:00.47
# Mc/sec: 5329.95
//
Query:       EPX73127.1  [L=324]
Description: thioredoxin reductase Trr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.4e-49  166.5   0.1    8.6e-49  166.3   0.1    1.0  1  Pyr_redox_2     Pyridine nucleotide-disulphide oxidoreductase
    5.1e-17   62.2   0.2    1.2e-14   54.7   0.0    2.4  2  Pyr_redox       Pyridine nucleotide-disulphide oxidoreductase
    1.5e-15   57.2   0.1    9.9e-13   48.0   0.0    2.1  2  Pyr_redox_3     Pyridine nucleotide-disulphide oxidoreductase
      5e-05   22.7   0.3     0.0004   19.7   0.1    2.2  2  Thi4            Thi4 family
    0.00019   20.8   0.1      0.075   12.3   0.0    2.2  2  FAD_binding_3   FAD binding domain
    0.00021   20.5   0.8      0.073   12.1   0.2    3.5  4  GIDA            Glucose inhibited division protein A
    0.00029   21.2   0.1      0.034   14.6   0.0    2.9  2  NAD_binding_7   Putative NAD(P)-binding
     0.0015   18.7   0.8       0.19   12.0   0.1    2.6  2  NAD_binding_8   NAD(P)-binding Rossmann-like domain
     0.0026   17.4   3.3       0.65    9.5   0.7    2.6  3  DAO             FAD dependent oxidoreductase
     0.0038   16.4   2.7      0.035   13.2   0.8    2.4  2  FAD_binding_2   FAD binding domain
  ------ inclusion threshold ------
      0.013   15.5   0.1        1.7    8.6   0.0    2.7  2  NAD_binding_9   FAD-NAD(P)-binding
      0.017   14.5   0.5        0.1   11.9   0.2    2.0  2  FAD_oxidored    FAD dependent oxidoreductase
      0.024   13.3   0.5        0.1   11.3   0.3    2.0  3  HI0933_like     HI0933-like protein
      0.033   13.1   0.2       0.17   10.7   0.1    2.2  3  Trp_halogenase  Tryptophan halogenase
      0.045   12.9   0.7          1    8.4   0.0    2.9  4  K_oxygenase     L-lysine 6-monooxygenase (NADPH-requiring)
       0.17   11.9   0.0         20    5.2   0.0    2.6  3  Shikimate_DH    Shikimate / quinate 5-dehydrogenase


Domain annotation for each model (and alignments):
>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.3   0.1   7.7e-52   8.6e-49       2     293 ..       5     303 ..       4     304 .. 0.90

  Alignments for each domain:
  == domain 1  score: 166.3 bits;  conditional E-value: 7.7e-52
                  SEEEE--SHHHHHHHHHHHHHTS-EEEEE...TTHCHHHCSHHHHCHHHHHHHHHHHHH..HHHHCHHHHCCCCHC....CTCEEEEESCEEEEETEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2   2 dvvviGgGpAGlaaaltlaqagakvtlve...legtclnggcllskallgvaedaeias..evvkklnqgielllg....eevvkidpgkkkvklekk 90 
                  +vv+iG+GpAG++aa++la+ ++  +++e   ++g   +g+   ++ +++++++++ +   e ++k++++ e++ +    e+v k+d  ++ +k   +
   EPX73127.1   5 KVVIIGSGPAGHTAAIYLARGELSPVMYEgmlANGIAAGGQLTTTTDVENFPGFPDGVNgtELTDKFRAQSERFGTtivsETVSKLDLSSRPFKFWLE 102
                  8****************************9*999**********************999**5555555443322223443569999999999999877 PP

                  ECTCEEEEEESEEEE---EEE-BCTCTTC.TTBEECCSECHHHHHHCCSS-TSEEEEES-SHHHHHHHHHHHHHT-EEEEEESSSSSSTTS-HHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2  91 kegdeekiaydklvlAtGssprdlgipGvaenvgklvrtldsaealklkllpkrivvvGgGyiGvElAaalaklgkevtlveardrllraldkelsaa 188
                    +d+  +++d ++lAtG+s+r+l+ipG++++++ ++++++ +++     ++k ++vvGgG  + E A++l+k+g++v+++ +rd+l       +s +
   EPX73127.1 103 GAEDGAPLTADCVILATGASARRLHIPGEEKYWQAGISACAVCDGAVPIYRNKPLAVVGGGDSAAEEAQFLTKYGSKVYVLVRRDKLR------ASPI 194
                  779************************************************************************************7......8999 PP

                  HHHHHHHT.TEEEEESCEEEEEEETTE.....EEE.EEETTSCEEEESEEEE-S-EEES-HHCSHCCT-EEEETTEE.E--TTSBESSTTEEE-GGGC CS
                  xxxxxxxx.xxxxxxxxxxxxxxxxxx.....xxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 189 leealeke.Gvevklgtsvkeidgnge.....kle.vvledgeeidadlvvvavGvrpstelleeklglelderggi.vvdeflrtnvpgiyaiGDva 278
                  ++++l  + +vev ++t+++e++g+g+     +++ +v++d + +++  +++a+G  p t+l+  k ++eld  g++  ++ +  t++pg +a+GDv+
   EPX73127.1 195 MANRLLSNpKVEVLWNTVAEEAQGDGKllnnlRVKnTVTGDSSDLQVNGLFYAIGHIPATDLV--KGQVELDAEGYLqTINGTPHTSIPGFFAAGDVQ 290
                  999988888******************999776669**************************5..99**********5567778************** PP

                  TECCSS--HHHHHHH CS
                  xxxxxxxxxxxxxxx RF
  Pyr_redox_2 279 ggkggpelaqaAvqq 293
                    ++++++a ++  +
   EPX73127.1 291 --DKVYRQAITSAGS 303
                  ..8888888776655 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.1     0.028        31       1      20 [.       5      24 ..       5      30 .. 0.91
   2 !   54.7   0.0     1e-17   1.2e-14       2      79 ..     157     229 ..     156     235 .. 0.92

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.028
                EEEEECSSHHHHHHHHHHHH CS
   Pyr_redox  1 kvvvvGgGyiglElAgalae 20
                kvv++G+G  g  +A +la+
  EPX73127.1  5 KVVIIGSGPAGHTAAIYLAR 24
                79*************99986 PP

  == domain 2  score: 54.7 bits;  conditional E-value: 1e-17
                 EEEECSSHHHHHHHHHHHHTTSEEEEEESSSSSSTTSSHHHHHHHHHHHHHT.TEEEECSEEEEEEEEETTSEEEEEEE CS
   Pyr_redox   2 vvvvGgGyiglElAgalaelgkkVtvversdkllrllDeeaskilqeklekn.gievllntkveeiegsedgvesvklk 79 
                 ++vvGgG+++ E+A++l+++g+kV+v++r+dkl+      as i++++l  n ++evl+nt++ee +g+++ ++ +++k
  EPX73127.1 157 LAVVGGGDSAAEEAQFLTKYGSKVYVLVRRDKLR------ASPIMANRLLSNpKVEVLWNTVAEEAQGDGKLLNNLRVK 229
                 68********************************......*********9888***************99866666665 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.0   0.5    0.0028       3.1       1      22 [.       7      28 ..       7      41 .. 0.85
   2 !   48.0   0.0   8.9e-16   9.9e-13     121     305 .]     108     287 ..      80     287 .. 0.77

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0028
  Pyr_redox_3  1 iIiGaGPaGlaaaielkkagle 22
                 +IiG GPaG +aai l + +l+
   EPX73127.1  7 VIIGSGPAGHTAAIYLARGELS 28
                 7*************99988875 PP

  == domain 2  score: 48.0 bits;  conditional E-value: 8.9e-16
  Pyr_redox_3 121 etyeAkkviiAtGefdkPnklnipGeek...lvkhyskvk..efhkyagqkvvViGgknSavDaAlelvrkgaeVtvvtrgseiekeesdpsyslkpd 213
                  + ++A+ vi+AtG     ++l+ipGeek     +    v   ++  y+++ ++V+Gg++Sa++ A  l ++g++V v++r++++++         +p+
   EPX73127.1 108 APLTADCVILATGA--SARRLHIPGEEKywqAGISACAVCdgAVPIYRNKPLAVVGGGDSAAEEAQFLTKYGSKVYVLVRRDKLRA---------SPI 194
                  5799*********9..999********844334444444322566799*********************************95555.........678 PP

  Pyr_redox_3 214 ienrleelvkeekikvlfnaevkeikeke...eeykvk...tedgkkvevkddvvlatGykpdlsflkkslfeldedgrpvlteeteetnvpglflaG 305
                  + nrl +     k++vl n+ ++e + +    ++ +vk   t d + ++  +  ++a+G  p ++++k  ++eld++g+ +  + t  t +pg f aG
   EPX73127.1 195 MANRLLSN---PKVEVLWNTVAEEAQGDGkllNNLRVKntvTGDSSDLQ-VNGLFYAIGHIPATDLVK-GQVELDAEGYLQTINGTPHTSIPGFFAAG 287
                  88887653...34666666655555544311133344331123323344.4778999**********9.9*************************999 PP

>> Thi4  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.1   3.5e-07    0.0004      17      64 ..       3      47 ..       1      55 [. 0.87
   2 ?    0.2   0.0      0.33   3.7e+02      18      49 ..     155     185 ..     149     192 .. 0.84

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 3.5e-07
                EEEEEEE--SHHHHHHHHHHHHCTTS-EEEEESSSS--TTTTTTSTTB CS
        Thi4 17 esDvvivGaGssGLtaayylakkpdlkvailersvspGGGawlGGqlf 64
                 s vvi+G+G++G taa yla+  +l  ++ e  ++ G  +  GGql 
  EPX73127.1  3 HSKVVIIGSGPAGHTAAIYLARG-ELSPVMYEGMLANG--IAAGGQLT 47
                578*******************9.*********99975..67788875 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.33
                 EEEEEE--SHHHHHHHHHHHHCTTS-EEEEES CS
        Thi4  18 sDvvivGaGssGLtaayylakkpdlkvailer 49 
                   +++vG+G s    a+ l+k  + kv +l r
  EPX73127.1 155 KPLAVVGGGDSAAEEAQFLTKY-GSKVYVLVR 185
                 56789***************99.888888765 PP

>> FAD_binding_3  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.3   0.0   6.7e-05     0.075       3      22 ..       5      24 ..       3      33 .. 0.91
   2 !    6.4   0.0    0.0039       4.4       5      36 ..     158     189 ..     155     218 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 6.7e-05
                   EEEEE--SHHHHHHHHHHHH CS
  FAD_binding_3  3 dVlIVGaGpaGlmlallLse 22
                   +V+I+G+GpaG ++a  L++
     EPX73127.1  5 KVVIIGSGPAGHTAAIYLAR 24
                   8***************9987 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0039
                    EEE--SHHHHHHHHHHHHTTHHEEEEESSSSS CS
  FAD_binding_3   5 lIVGaGpaGlmlallLseaGvrvvlvekrstt 36 
                    ++VG+G + +  a++L+++G +v ++ +r++ 
     EPX73127.1 158 AVVGGGDSAAEEAQFLTKYGSKVYVLVRRDKL 189
                    69*********************999998765 PP

>> GIDA  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   0.2   6.6e-05     0.073       1      28 [.       5      32 ..       5      56 .. 0.83
   2 ?    3.5   0.0     0.028        31     113     161 ..      82     132 ..      69     143 .. 0.68
   3 ?    0.6   0.0      0.21   2.4e+02       3      28 ..     158     183 ..     156     223 .. 0.83
   4 ?   -1.6   0.0      0.95   1.1e+03     354     389 ..     279     316 ..     269     319 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 6.6e-05
                CEEEE-SSHHHHHHHHHHHHTT--EEEE CS
        GIDA  1 dviViGgGhAGceAAlaaarlGakvlLi 28
                +v++iG G AG  AA+ +ar  ++ +++
  EPX73127.1  5 KVVIIGSGPAGHTAAIYLARGELSPVMY 32
                69******************98887777 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.028
                 EEES-EEEEEECTTEEEE..EEETTS-EEEECEEEE--TT-BT-EEEE.TTE CS
        GIDA 113 iieeeveeliveekkvkg..vvtedgetikakavviatGtflkgkihi.gek 161
                 i++e+v++l+++++  k      edg+ ++a++v++atG+ ++ + hi ge+
  EPX73127.1  82 IVSETVSKLDLSSRPFKFwlEGAEDGAPLTADCVILATGA-SARRLHIpGEE 132
                 6666666666655333331134689999************.55555541444 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.21
                 EEE-SSHHHHHHHHHHHHTT--EEEE CS
        GIDA   3 iViGgGhAGceAAlaaarlGakvlLi 28 
                  V+GgG +  e A  + + G kv  +
  EPX73127.1 158 AVVGGGDSAAEEAQFLTKYGSKVYVL 183
                 69999999999999999999999876 PP

  == domain 4  score: -1.6 bits;  conditional E-value: 0.95
                 SSBTEEE-CGGGTB-SHHHH...HHHHHHHHHHHHHHHC CS
        GIDA 354 kvkgLflAGqinGteGYeEa...aaqGllAGinaarkak 389
                 +++g f+AG++     Y  a   a++G+ A++ a ++++
  EPX73127.1 279 SIPGFFAAGDVQDKV-YRQAitsAGSGCQAALLAMHYIE 316
                 478888888888776.65441115577777777777665 PP

>> NAD_binding_7  Putative NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0     0.093     1e+02       7      29 ..       3      25 ..       1     137 [. 0.58
   2 !   14.6   0.0   3.1e-05     0.034       6      39 ..     153     186 ..     151     261 .. 0.79

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.093
  NAD_binding_7  7 gkkvlvvGgGevAarkvrkllea 29
                     kv+++G G+ + + +  l++ 
     EPX73127.1  3 HSKVVIIGSGPAGHTAAIYLARG 25
                   56788888888887766666554 PP

  == domain 2  score: 14.6 bits;  conditional E-value: 3.1e-05
  NAD_binding_7   6 kgkkvlvvGgGevAarkvrklleagakvtvvape 39 
                    ++k   vvGgG+ Aa+ ++ l ++g kv v+  +
     EPX73127.1 153 RNKPLAVVGGGDSAAEEAQFLTKYGSKVYVLVRR 186
                    688999**********************997665 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   0.1   0.00017      0.19       1      26 [.       8      33 ..       8      64 .. 0.75
   2 ?    4.7   0.1     0.032        35       1      30 [.     159     188 ..     159     192 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00017
                   EE--SHHHHHHHHHHHCCTEEEEEE- CS
  NAD_binding_8  1 IvGaGlsGlvaAylLakagfdvllle 26
                   I+G+G +G +aA +La+  ++ + +e
     EPX73127.1  8 IIGSGPAGHTAAIYLARGELSPVMYE 33
                   9***************9877777777 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.032
                    EE--SHHHHHHHHHHHCCTEEEEEE-SSSS CS
  NAD_binding_8   1 IvGaGlsGlvaAylLakagfdvlllekrdr 30 
                    +vG+G s++  A++L+k+g +v +l +rd+
     EPX73127.1 159 VVGGGDSAAEEAQFLTKYGSKVYVLVRRDK 188
                    8*****************999998877665 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.7   0.00058      0.65       1      22 [.       5      25 ..       5      34 .. 0.85
   2 !    7.4   0.0    0.0026       2.9     142     207 ..      62     126 ..      45     143 .. 0.73
   3 ?   -2.6   0.0       2.7     3e+03     133     205 ..     242     306 ..     203     318 .. 0.54

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00058
                EEEEECTSHHHHHHHHHHHHTT CS
         DAO  1 dvviiGGGiiGlstAyeLarrg 22
                +vviiG+G +G ++A +Lar g
  EPX73127.1  5 KVVIIGSGPAGHTAAIYLAR-G 25
                59****************76.4 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0026
                 EEEHHHHHHHHHHHHHHTT-EEEESECEEEEEEEETCEEEEE..EECTEEEEEEEEEEE--GGGHHHH CS
         DAO 142 qvdpakltaalaraaealGveilegtevtgleeedgkvwgve..rttpgendaadavVnaaGawsdll 207
                 + +  +lt  ++++ e+ G +i+ + +v +l+  + +  +     +++g+  +ad+v++a+Ga ++ l
  EPX73127.1  62 V-NGTELTDKFRAQSERFGTTIVSE-TVSKLDLSS-RPFKFWleGAEDGAPLTADCVILATGASARRL 126
                 3.77888999999999999999999.888885532.222222324333665356**********9854 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 2.7
                 EEEEETTEEEEEHHHHHHHHHHHHHHTT-EEEESECEEEEEEEE..TCEEEEEEECTEEEEEEEEEEE--GGGHH CS
         DAO 133 galfypdtgqvdpakltaalaraaealGveilegtevtgleeed..gkvwgverttpgendaadavVnaaGawsd 205
                  +lfy   g++ +  l+++  +  +++  + ++gt+ t++  ++    ++ v    +   + +++ + +aG + +
  EPX73127.1 242 NGLFYAI-GHIPATDLVKGQVELDAEGYLQTINGTPHTSI--PGffA-AGDV----QD--KVYRQAITSAGSGCQ 306
                 4455555.55555555555555533333566666666666..21110.1111....11..124666666665555 PP

>> FAD_binding_2  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.8   3.1e-05     0.035       2      30 ..       6      34 ..       5      50 .. 0.83
   2 ?    2.5   0.0     0.055        62     360     405 ..     245     293 ..     208     304 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 3.1e-05
                   EEEE--SHHHHHHHHHHHHTTT-EEEEES CS
  FAD_binding_2  2 viViGsGlAGLaAAleaaeaGlkvavvek 30
                   v++iGsG AG +AA+ +a+  l+ ++ e 
     EPX73127.1  6 VVIIGSGPAGHTAAIYLARGELSPVMYEG 34
                   9*****************99987666665 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.055
                    .....EEEEEEEES-EEEBETTSBE...STTEEESSBTEEE-STCEESS CS
  FAD_binding_2 360 fyavkvvpaqhytmgGvetdengrv...ldadgqpipGLYAaGevaagg 405
                    fya+   pa+    g ve d++g      +   + ipG +AaG v    
     EPX73127.1 245 FYAIGHIPATDLVKGQVELDAEGYLqtiNGTPHTSIPGFFAAGDVQDKV 293
                    555555555555566666666655522233345679*******997555 PP

>> NAD_binding_9  FAD-NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.1     0.041        46       1      19 [.       7      25 ..       7      31 .. 0.88
   2 ?    8.6   0.0    0.0015       1.7     113     155 ..      76     121 ..      65     122 .. 0.68

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.041
  NAD_binding_9  1 aivGaGprGlavlerLlar 19
                   +i+G Gp+G +++  L++ 
     EPX73127.1  7 VIIGSGPAGHTAAIYLARG 25
                   7************999875 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0015
  NAD_binding_9 113 egvtvevhraevvdlee..radgqavll.adgaslaadaVvLAlGh 155
                    e++  ++++++v +l+   r+ ++++   +dga l+ad V+LA+G 
     EPX73127.1  76 ERFGTTIVSETVSKLDLssRPFKFWLEGaEDGAPLTADCVILATGA 121
                    45566677777775555005555566556799************95 PP

>> FAD_oxidored  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.2     9e-05       0.1       2      40 ..       6      48 ..       5      81 .. 0.83
   2 ?    0.6   0.0      0.26   2.9e+02      92     127 ..     195     230 ..     169     240 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 9e-05
  FAD_oxidored  2 vvVvGGgpaGvaAAiaAaraGakvlLve....ergvlGGllts 40
                  vv++G+gpaG +AAi  ar   + ++ e    +    GG+lt 
    EPX73127.1  6 VVIIGSGPAGHTAAIYLARGELSPVMYEgmlaNGIAAGGQLTT 48
                  9******************999988877555455666777765 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.26
  FAD_oxidored  92 vleemlaeagvtvllntrlvevekegkriesvtves 127
                   +++ +l++++v+vl nt+++e++ +gk ++ ++v++
    EPX73127.1 195 MANRLLSNPKVEVLWNTVAEEAQGDGKLLNNLRVKN 230
                   5678889****************9986677777755 PP

>> HI0933_like  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.3     9e-05       0.1       2      32 ..       5      35 ..       4      55 .. 0.87
   2 ?   -1.7   0.0      0.77   8.7e+02     143     164 ..      99     121 ..      58     125 .. 0.53
   3 ?   -2.7   0.0       1.6   1.8e+03       4      31 ..     158     185 ..     156     190 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 9e-05
                 SEEEE--SHHHHHHHHHHHHTT--EEEE-SS CS
  HI0933_like  2 dviviGgGaAGlmaAisaakrgkrVllleka 32
                 +v++iG G+AG  aAi +a+ + + +++e +
   EPX73127.1  5 KVVIIGSGPAGHTAAIYLARGELSPVMYEGM 35
                 79****************9999998888876 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.77
                  EEEEE..TTEEEEESEEEE---- CS
  HI0933_like 143 frvkt.kseeeleadklvlAtGG 164
                  f ++  +++  l+ad ++lAtG 
   EPX73127.1  99 FWLEGaEDGAPLTADCVILATGA 121
                  33333345666777777777775 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 1.6
                  EEE--SHHHHHHHHHHHHTT--EEEE-S CS
  HI0933_like   4 iviGgGaAGlmaAisaakrgkrVlllek 31 
                  +v+GgG +    A  + k g++V +l +
   EPX73127.1 158 AVVGGGDSAAEEAQFLTKYGSKVYVLVR 185
                  7999999988888888999999998855 PP

>> Trp_halogenase  Tryptophan halogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1   0.00015      0.17       1      20 [.       5      24 ..       5      30 .. 0.93
   2 ?   -1.7   0.0      0.85   9.6e+02     160     211 ..      71     123 ..      62     136 .. 0.81
   3 ?   -2.4   0.0       1.4   1.6e+03       3      26 ..     158     180 ..     157     187 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00015
                    EEEEE--SHHHHHHHHHHHH CS
  Trp_halogenase  1 kivivGGGtaGwlaAaalak 20
                    k+vi+G G+aG +aA++la+
      EPX73127.1  5 KVVIIGSGPAGHTAAIYLAR 24
                    79****************97 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.85
                     HHHHHHHCT-EEEE--EEEEEE-TTS-EEEEEE.TTS-EEE-SEEEE-SGGG- CS
  Trp_halogenase 160 LrrvaearGvtrvegkvvevqldedgrveslrl.edgreveadlfiDcsGfrg 211
                      r+ +e+ G t+v+ +v + +l  + +  +l+  edg  + ad +i ++G  +
      EPX73127.1  71 FRAQSERFGTTIVSETVSKLDLSSRPFKFWLEGaEDGAPLTADCVILATGASA 123
                     57788889999999999999999999988888615699999999999999754 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 1.4
                     EEE--SHHHHHHHHHHHHHTTTSS CS
  Trp_halogenase   3 vivGGGtaGwlaAaalakalkgkl 26 
                      +vGGG ++   A  l k++++ +
      EPX73127.1 158 AVVGGGDSAAEEAQFLTKYGSK-V 180
                     69*******9999999999843.3 PP

>> K_oxygenase  L-lysine 6-monooxygenase (NADPH-requiring)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1       1.2   1.3e+03     192     204 ..       4      16 ..       2      28 .. 0.64
   2 ?   -0.9   0.0      0.63   7.1e+02     327     339 ..     108     120 ..      85     123 .. 0.84
   3 ?    8.4   0.0   0.00092         1     191     228 ..     154     189 ..     150     195 .. 0.78
   4 ?   -0.5   0.0      0.46   5.1e+02     288     339 ..     198     249 ..     192     251 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.2
  K_oxygenase 192 kriaVvGsGqSaa 204
                   +++++GsG  + 
   EPX73127.1   4 SKVVIIGSGPAGH 16 
                  5778888886654 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.63
  K_oxygenase 327 etlevdavvlATG 339
                    l++d+v+lATG
   EPX73127.1 108 APLTADCVILATG 120
                  55789*******9 PP

  == domain 3  score: 8.4 bits;  conditional E-value: 0.00092
  K_oxygenase 191 kkriaVvGsGqSaaeifedllrrqkkvelklvtrseal 228
                  +k +aVvG+G Saae ++ l++  +  ++ +++r+++l
   EPX73127.1 154 NKPLAVVGGGDSAAEEAQFLTKYGS--KVYVLVRRDKL 189
                  57789**********9998887766..56666666665 PP

  == domain 4  score: -0.5 bits;  conditional E-value: 0.46
  K_oxygenase 288 kvkgeerlrllpnrevesaeaegkgeveltlrneesgeeetlevdavvlATG 339
                  ++ +++++++l n+  e+a+ +gk   +l ++n+ +g+++ l+v+ +++A G
   EPX73127.1 198 RLLSNPKVEVLWNTVAEEAQGDGKLLNNLRVKNTVTGDSSDLQVNGLFYAIG 249
                  5667788899999999999999988999*******************99988 PP

>> Shikimate_DH  Shikimate / quinate 5-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.018        20      11      37 ..       2      28 ..       1      32 [. 0.85
   2 ?   -3.0   0.0       6.1   6.8e+03      76      89 ..     112     125 ..     111     137 .. 0.83
   3 ?    3.9   0.0     0.048        53      11      52 ..     153     194 ..     143     211 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.018
                  TT-EEEEES-SHHHHHHHHHHHCCT-C CS
  Shikimate_DH 11 kekkvlliGaGemaelvakhLlakgvk 37
                  +++kv++iG G  ++ +a +L++ ++ 
    EPX73127.1  2 SHSKVVIIGSGPAGHTAAIYLARGELS 28
                  6789***************99987765 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 6.1
                   -SEEEE-SSSSS-S CS
  Shikimate_DH  76 advvisataseepi 89 
                   ad vi at+++   
    EPX73127.1 112 ADCVILATGASARR 125
                   7999***9998655 PP

  == domain 3  score: 3.9 bits;  conditional E-value: 0.048
                   TT-EEEEES-SHHHHHHHHHHHCCT-CEEEEEESSHHHHHHH CS
  Shikimate_DH  11 kekkvlliGaGemaelvakhLlakgvkkvvvaNRtlerakel 52 
                   ++k   ++G G  a + a+ L + g k  v + R+  ra+ +
    EPX73127.1 153 RNKPLAVVGGGDSAAEEAQFLTKYGSKVYVLVRRDKLRASPI 194
                   567788*********************888888998888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (324 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       417  (0.0232584); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.56u 0.29s 00:00:00.85 Elapsed: 00:00:00.46
# Mc/sec: 2109.78
//
Query:       EPX73128.1  [L=369]
Description: 3 beta-hydroxysteroid dehydrogenase/delta 5-4- isomerase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.8e-66  221.9   0.0    9.3e-66  221.7   0.0    1.0  1  3Beta_HSD        3-beta hydroxysteroid dehydrogenase/isomeras
      3e-29  102.2   0.0    4.1e-29  101.8   0.0    1.1  1  Epimerase        NAD dependent epimerase/dehydratase family
      1e-17   64.5   0.0    5.9e-17   62.1   0.0    1.9  1  GDP_Man_Dehyd    GDP-mannose 4,6 dehydratase
    1.6e-13   50.4   0.0    2.2e-13   50.0   0.0    1.2  1  RmlD_sub_bind    RmlD substrate binding domain
    1.5e-10   40.7   0.1    5.2e-09   35.7   0.1    2.3  1  NAD_binding_4    Male sterility protein
    3.3e-09   36.9   0.0    4.6e-09   36.4   0.0    1.2  1  NAD_binding_10   NAD(P)H-binding
      5e-08   32.4   0.0    9.4e-08   31.5   0.0    1.4  1  Polysacc_synt_2  Polysaccharide biosynthesis protein
     0.0016   18.4   0.0      0.014   15.3   0.0    2.2  1  KR               KR domain
     0.0052   17.0   0.0      0.016   15.4   0.0    1.8  1  Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding doma
  ------ inclusion threshold ------
       0.16   12.2   0.0       0.28   11.5   0.0    1.5  1  TrkA_N           TrkA-N domain


Domain annotation for each model (and alignments):
>> 3Beta_HSD  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  221.7   0.0   5.2e-69   9.3e-66       5     280 .]      39     298 ..      35     298 .. 0.94

  Alignments for each domain:
  == domain 1  score: 221.7 bits;  conditional E-value: 5.2e-69
   3Beta_HSD   5 gaGFlGralvkeLvrleelkevrvlDlrespelleelskvnvkkviegDvtdkdkleealegvdvvihlaslvdvagkltedeimkvnvkGTrnvleac 103
                 g+GFlG +++++L ++ee   + ++Dl ++++ll+el +  + ++ +gD+t++++l+++  + +   +++++++v++ l +d + ++nv GT+n++ ac
  EPX73128.1  39 GSGFLGGHIIRQLCKREE-PRIAAFDLFDNEKLLQELGH--RFTMYNGDLTKNEDLDRVFSSFQPQTVIHTASPVHN-LARDIYFQINVSGTENIIRAC 133
                 79***************7.************99665543..34479***************9987766667889998.899****************** PP

   3Beta_HSD 104 vkagvrvlvYtSsaevvgpnslgeeilngdEeleyeslhqdaypesKalaEklvlkaNgrtlknggrlyTcaLRpagiyGegdkllvpllkqlaklgla 202
                 +k++v++lvYtSsa+vv++   g +++n +Ee +y+++h+day+esKalaE +vl+ N         l Tc+LR ag++G+gd++lvp +  ++++g++
  EPX73128.1 134 KKHNVNALVYTSSAGVVFN---GADLINVNEECPYPKVHMDAYNESKALAETIVLENNS------PSLRTCSLRVAGLFGPGDRQLVPGMLSVLRNGQT 223
                 *******************...**********************************998......48******************************** PP

   3Beta_HSD 203 lfkigdeevlsdrvYvgNvawahilAaralqdpkkkssvagqayfisddsPvesyddfnltllkelglelksviklpl 280
                 +f++g++ +l+d++Y +N a+ah+lAa +l+    +s++agq++fi++ +  + ++df + ++ + g+  + +i++p+
  EPX73128.1 224 KFQLGQNLNLFDFTYIENAAHAHLLAADNLLLH--NSTAAGQVFFITNGQAIY-FWDFIRAIWANAGHVPPYTIVFPR 298
                 *******************************99..9*****************.**************9999998885 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.8   0.0   2.3e-32   4.1e-29       1     228 [.      35     252 ..      35     260 .. 0.89

  Alignments for each domain:
  == domain 1  score: 101.8 bits;  conditional E-value: 2.3e-32
                 EEEETTTSHHHHHHHHHHHHCTSE.EEEEES-STTTTCHHCHHC.EEEE--TT-HHHHHHHHHHHT-SEEEE--S---HHHHHHSHHHHHHHHTHHHHH CS
   Epimerase   1 ilVtGatGfiGsalvkallekgye.vigldrlssasntarledl.elveldltdrsalerlfkeeqpdavihlAavggvaassedpadfieknlqgtln 97 
                 +lV+G  Gf+G +++++l ++    + ++d   +++  ++l +  +++++dlt++++l+r+f+++qp++vih A     ++ +  +  ++++n+ gt n
  EPX73128.1  35 VLVIGS-GFLGGHIIRQLCKREEPrIAAFDLFDNEKLLQELGHRfTMYNGDLTKNEDLDRVFSSFQPQTVIHTAS----PVHNLARDIYFQINVSGTEN 128
                 578876.************99955499999996666666666659****************************66....444444577799******** PP

                 HHHHHHHHTCTEEEEEEEGGGGTSCSS.SSBSTCSTTS--..--SSHHHHHHHHHHHHHHHHHHHHT-EEEEEEESEEESTTS-TTSTTSHHHHHHHHH CS
   Epimerase  98 lleaarkagvkrllflsSsevYGkdae.qpkeettltgpl..kpnspYaaaKlageklveayaaqyglnaiilrlfnlyGprngegevsrvipalirki 193
                 ++ a++k++v+ l++ sS+ v  ++a+ +  +e++   p+      +Y  +K+++e +v + +++  l++++lr+  l+Gp+     +++++p +++ +
  EPX73128.1 129 IIRACKKHNVNALVYTSSAGVVFNGADlINVNEEC---PYpkVHMDAYNESKALAETIVLE-NNSPSLRTCSLRVAGLFGPG-----DRQLVPGMLSVL 218
                 **********************9999965789999...7777899***************8.56666***************.....************ PP

                 HTTSSSEEEETTST-EEEEEEHHHHHHHHHHHHHH CS
   Epimerase 194 legkqevtllgdgtalRdflyveDvaeaillvleh 228
                  +g+     lg+  +l df y+e +a a+ll++++
  EPX73128.1 219 RNGQ-TKFQLGQNLNLFDFTYIENAAHAHLLAADN 252
                 ***9.99999*********************9987 PP

>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.1   0.0   3.3e-20   5.9e-17       5     332 .]      39     359 ..      36     359 .. 0.73

  Alignments for each domain:
  == domain 1  score: 62.1 bits;  conditional E-value: 3.3e-20
                    TTSHHHHHHHHHHHHCT-CCEEEEEEESS-TTHHHHHCTTT...TTGCCEEEEE--TT-HHHHHHHHHHHT-SEEEE--S---HHHHTTSHHHHHH CS
  GDP_Man_Dehyd   5 iaGfiGsylaelLlekgyevhgivrrsssfntgriehlakdpkeeleenlklhkgDltDssslerllaevqpdevynLAAqshVdvsfekPeytae 100
                    ++Gf G +++++L++++   +   ++ +       e+l +    el +++++++gDlt ++ l+r++++ qp++v++ A  s V++     + +++
     EPX73128.1  39 GSGFLGGHIIRQLCKREEPRIAAFDLFD------NEKLLQ----ELGHRFTMYNGDLTKNEDLDRVFSSFQPQTVIHTA--SPVHNLAR--DIYFQ 120
                    58*************9776654433322......344543....34569****************************98..56666666..4899* PP

                    HHTHHHHHHHHHHHHCT..TTSEEEEEEEGGGG-S-SSSSB-TTS---..--SHHHHHHHHHHHHHHHHHHHH---EEEEEE-EEESTTS-TTSCC CS
  GDP_Man_Dehyd 101 vnvlGtlrLLeairalglekkvrfyqaStsEvYGkvqevpqtEttpfy..PrsPYaaaKlyadwivvnyreayglfavngilfnhesprrgetfvt 194
                    +nv Gt +++ a++++++  ++ +y +S   v+  ++ + ++E+ p+       Y  +K+ a++iv + +++  l +++ ++    +p        
     EPX73128.1 121 INVSGTENIIRACKKHNV--NALVYTSSAGVVFNGADLINVNEECPYPkvHMDAYNESKALAETIVLE-NNSPSLRTCSLRVAGLFGPGD------ 207
                    ****************98..5899999999***99999******9996225899************98.57799**************93...... PP

                    CHHHHHHHHHHTTS-C-EECTTTT-EEEEEEHHHHHHH.....HHHHHHCSS-..--EEE-TT-EEECHHCHHCCHHCCCHHHHHH.......... CS
  GDP_Man_Dehyd 195 rkitravarialgkqevlylGnldakRdwghvkDyvea.....mwlmlqqdkp..edyviatgethsvrefvelaflelgktiewegkgeeevg.. 281
                    r++++++  ++++ q++++lG+  +  d+++++  ++a       l+l++ ++  + + i +g+     +f+++  +++g     +    +  g  
     EPX73128.1 208 RQLVPGMLSVLRNGQTKFQLGQNLNLFDFTYIENAAHAhllaaDNLLLHNSTAagQVFFITNGQAIYFWDFIRAIWANAGHVPPYTIVFPRSLGia 303
                    55566666777777899*****************99993333223344444432244556666666667777666666664332222223333332 PP

                    ......TTGGCCCEECGG--S...S--SB--B-THHHHHHH----SS-HHHHHHHH CS
  GDP_Man_Dehyd 282 ..rakesgkvvvevdpkyfrp...gevdlllgdaskakeeLgWkpkvsfeelvrem 332
                      +a+e        +p + r        +++ d++ka+e L+++p +++ee+++++
     EPX73128.1 304 laTAAEWACYFLGKEPGFTRFrvqFSCANRYFDITKARELLNYRPIYDLEEGIKRT 359
                    32333444444445554444311144567789*********************986 PP

>> RmlD_sub_bind  RmlD substrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.0   0.0   1.2e-16   2.2e-13       4     232 ..      36     287 ..      32     299 .. 0.76

  Alignments for each domain:
  == domain 1  score: 50.0 bits;  conditional E-value: 1.2e-16
                    EEESTTSHHHHHHHHHCTTTSEEEEEE-TT.................T--TTSHHHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHH CS
  RmlD_sub_bind   4 lvtGanGqlGseLakqlaeeglevlaltre.................eldltdaeavaellkeakpdvvvnaAAytavDkaEseeeaayavnaeav 82 
                    lv+G +G lG ++++ql +++   +a                     + dlt++e +++++++++p+ v+++A           ++  +++n+ ++
     EPX73128.1  36 LVIG-SGFLGGHIIRQLCKREEPRIAAFDLfdnekllqelghrftmyNGDLTKNEDLDRVFSSFQPQTVIHTASP----VHNLARDIYFQINVSGT 126
                    5555.57777777777766555444443333567888888888888899**********************8864....3456899********** PP

                    HHHHHHHHHCT-.EEEEEEE.GGGS-S-TTS-B-TTS----...SSHHHHHHHHHHHHHHHH-S...SEEEEEE-SEESSSSS-HHHHHHHHHHH- CS
  RmlD_sub_bind  83 ealAeaaaavga.lLihvSt.DyVFdGekkrpYeeddetsP...lnvYGrtKlaGEqavlaagk...kalivRtswvygekgknfvktmlrlaker 170
                    e++ +a++++++  L++ S+   VF+G+   +  +++ + P   + +Y ++K++ E  vl+++    +++ +R++ ++g  ++++v  ml+ +++ 
     EPX73128.1 127 ENIIRACKKHNVnALVYTSSaGVVFNGADLIN-VNEECPYPkvhMDAYNESKALAETIVLENNSpslRTCSLRVAGLFGPGDRQLVPGMLSVLRNG 221
                    **********98469999872689****5554.33444455222579*************97654558899********************99766 PP

                    SE.EEEESS.-EE--EEHHHHHHHHHHHHHHCHH.GGG..-EEEE---BS-EEHHHHHHHHHHHHC CS
  RmlD_sub_bind 171 ee.lkvvaD.qlgsPTsardlAevllqllekaaeekel..agvyHlanegetswlefArailkeag 232
                    ++  ++ +   l   T+ ++ A++ l ++++ + ++++   +v+ ++n +++   +f rai ++ag
     EPX73128.1 222 QTkFQLGQNlNLFDFTYIENAAHAHLLAADNLLLHNSTaaGQVFFITNGQAIYFWDFIRAIWANAG 287
                    541444333144567888888888888888877665555578888898888888888888887776 PP

>> NAD_binding_4  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.7   0.1   2.9e-12   5.2e-09      46     248 ..      60     248 ..      39     254 .. 0.73

  Alignments for each domain:
  == domain 1  score: 35.7 bits;  conditional E-value: 2.9e-12
                    -SS-HHHHHHH...HHTTTEEEEE--TTSGGGG--HHHHHHH..HHH--EEEE--SS-S.STTSSEEHHHHHHHHHHHHHHHTSSS--.-EEEEEE CS
  NAD_binding_4  46 ekkelfsallk...elaerikvveGDlseprlGLseedlqel..aeevdviihsaAtvnfdepykellrvNveGtrevlelakklkklkvllhvST 136
                    + ++lf+++ k   el +r ++++GDl++++      dl+++  + + + +ih a  v+ +   +  +++Nv Gt+++++ +kk + + +l++ S+
     EPX73128.1  60 AAFDLFDNE-KllqELGHRFTMYNGDLTKNE------DLDRVfsSFQPQTVIHTASPVH-NLARDIYFQINVSGTENIIRACKKHNVN-ALVYTSS 146
                    344444444.22449999999999**99875......5555511335679********9.556699*****************99888.******* PP

                    ..GGGTTS-TTT--SSS-H......HHH--EEEETTTCCCHHHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-....-SSST---TTSHHHHHHH CS
  NAD_binding_4 137 ..ayvngeregeveekvyeegekeekldederaklkglpntYeqsKalaEklvrearrrsglpvvivRpsiitg....esktGwingsdlgirgll 226
                       ++ng++   +               ++e    k + ++Y+ sKalaE +v e ++   l+++ +R+  + g    + ++G++   ++g + + 
     EPX73128.1 147 agVVFNGADL--I-------------NVNEECPYPKVHMDAYNESKALAETIVLENNSP-SLRTCSLRVAGLFGpgdrQLVPGMLSVLRNGQTKFQ 226
                    6445555555..4.............45667788889999***************9976.899999998877777766666666666666666666 PP

                    HHHHH-EEES-SB---TT--EE CS
  NAD_binding_4 227 gliakgvlpeilgdkeavldlv 248
                     + + + +  ++ ++ a+++l+
     EPX73128.1 227 LGQNLNLFDFTYIENAAHAHLL 248
                    6666666655555555555555 PP

>> NAD_binding_10  NAD(P)H-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.4   0.0   2.6e-12   4.6e-09       2     131 ..      39     184 ..      39     223 .. 0.75

  Alignments for each domain:
  == domain 1  score: 36.4 bits;  conditional E-value: 2.6e-12
                     TTSHHHHHHHHHHHHC-T-EEEEE..ETTHHHCHHHHCTTTCEEEE--TT-CCHHHHHHTT-S..EEEES---TCC...HHHH........HHHH CS
  NAD_binding_10   2 AtGkvGrllvkellargghevtal..vRnpeklaeleaeeglevvegdvtdvedlaealkgad..aVvsalggggk...deeg........akni 81 
                     ++G  G +++++l +r++ ++ a+    n++ l+el    + ++  gd+t+ edl ++++  +  +V+ ++++ ++   d  +        ++ni
      EPX73128.1  39 GSGFLGGHIIRQLCKREEPRIAAFdlFDNEKLLQELG--HRFTMYNGDLTKNEDLDRVFSSFQpqTVIHTASPVHNlarD--IyfqinvsgTENI 129
                     689*************966666655377888889986..7********************886669*****998886440..255566667**** PP

                     HHHHHHCT--EEEEEEETTTTSGCGCHHHHHHHH......CCHHHHHHHHHHHHHH CS
  NAD_binding_10  82 vdaakeagvkRfvlvsaigvgdevpgefgewnke......llkaylaakraaeell 131
                     ++a+k+++v+ +v+ s++gv  + ++ + ++n+e       + ay + k+ ae ++
      EPX73128.1 130 IRACKKHNVNALVYTSSAGVVFNGAD-LINVNEEcpypkvHMDAYNESKALAETIV 184
                     ********************854333.33333333333336778888888888875 PP

>> Polysacc_synt_2  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.5   0.0   5.2e-11   9.4e-08       6     128 ..      39     146 ..      35     152 .. 0.80

  Alignments for each domain:
  == domain 1  score: 31.5 bits;  conditional E-value: 5.2e-11
                      TTSHHHHHHHHHHHHHB-SEEEEEES-HHHHHHHHHH......-TTEEEE....E--TT-HHHHHHHTT..T-SEEEE------HHHHHHSHHH CS
  Polysacc_synt_2   6 agGsiGselvrqilkkkpkkiillerdElklyeiekeleeelkkkklkveivpvigdvrdkerlekaleelkvdvvfhaAAlKhVPlveenple 99 
                      ++G +G +++rq++k++  +i  ++  ++   ++ +el     + ++    ++  gd++++e l+++++++++++v+h+A     P+ +     
       EPX73128.1  39 GSGFLGGHIIRQLCKREEPRIAAFDLFDN--EKLLQELG----H-RF----TMYNGDLTKNEDLDRVFSSFQPQTVIHTAS----PVHNLARDI 117
                      46889999999999999999999987443..34445552....2.22....2336*************************8....677777777 PP

                      HHHHHHHHHHHHHHHHHHTT-SEEEEEEE CS
  Polysacc_synt_2 100 aiktNvlgtenvieaaieagvkkvvliSt 128
                       ++ Nv gten+i+a+++++v+++v+ S+
       EPX73128.1 118 YFQINVSGTENIIRACKKHNVNALVYTSS 146
                      8899**********************997 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   7.6e-06     0.014       5     142 ..      37     152 ..      34     160 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 7.6e-06
                 EETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHTT-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE---------TTT--HH CS
          KR   5 itGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaelealgaevevvaaDvsdkdavealleeikaeeppikGvihaAgvlrdklleemtae 103
                 ++G  G LG +++r+l+++ + +++ +        d++   + l++lg + ++++ D+++++++ +++++++ +      vih+A       + ++  +
  EPX73128.1  37 VIG-SGFLGGHIIRQLCKREEPRIAAFDLF-----DNE---KLLQELGHRFTMYNGDLTKNEDLDRVFSSFQPQ-----TVIHTASP-----VHNLARD 116
                 554.68888888888888888888877666.....333...56889999**********************955.....5***9965.....5555555 PP

                 HHHHHHTTTTHHHHHHHHHTTTS--SEEEEEEEHHHHH- CS
          KR 104 dleqvlapKvkGawnLhelledesldffvlfSSiagllg 142
                      ++  v+G++n+ +++++++++ +v++SS++ ++ 
  EPX73128.1 117 I---YFQINVSGTENIIRACKKHNVNALVYTSSAGVVFN 152
                 4...57778************************998875 PP

>> Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   9.2e-06     0.016       1      83 [.      35     113 ..      35     182 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 9.2e-06
                      EEEE--SHHHHHHHHHHHCTCCT-GEEEEEESSHHHHHHHHCHHTTTCEEEEE--TTTHHHHHHHHHTTS..SEEEE-SSGGGHH CS
  Sacchrp_dh_NADP   1 vliiGaGsvGqavaellarhfdvdaeitvadrskeklealaakalgvrfeaialdaenyeavLaallkeg..dlvvnlsppissl 83 
                      vl+iG+G+ G  +++ l ++++   +i+  d  +++  +l+++ lg rf+ +  d  + e+ L+++ ++   + v++ + p+ +l
       EPX73128.1  35 VLVIGSGFLGGHIIRQLCKREEP--RIAAFDLFDNE--KLLQE-LGHRFTMYNGDLTKNED-LDRVFSSFqpQTVIHTASPVHNL 113
                      89*****************9865..66666654444..88865.8****************.*******99*******9999654 PP

>> TrkA_N  TrkA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00015      0.28       1      57 [.      35      93 ..      35     152 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00015
                EEEES-SHHHHHHHHHHHH.TTEEEEEEE..SSHHHHHHHHHTTSEEEES-TTSHHHHHH CS
      TrkA_N  1 iiiiGlGrvGrslaeeLse.ggkdvvvid..kdeerveelreeglevvvgdatdeevLee 57
                +++iG G +G +++++L + +++++ + d  ++e+ ++el  + ++ ++gd t+ e L++
  EPX73128.1 35 VLVIGSGFLGGHIIRQLCKrEEPRIAAFDlfDNEKLLQEL-GHRFTMYNGDLTKNEDLDR 93
                68*****************667889999953344555555.57788*******9998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (369 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       423  (0.0235931); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.46
# Mc/sec: 2418.82
//
Query:       EPX73129.1  [L=473]
Description: serine/threonine protein phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.3e-29  104.2   0.1    2.3e-29  103.4   0.1    1.3  1  Metallophos  Calcineurin-like phosphoesterase
    6.5e-27   93.7   0.0    1.3e-26   92.7   0.0    1.5  1  PPP5         PPP5 TPR repeat region
    3.1e-18   64.7   7.2    6.2e-05   22.6   0.1    3.8  3  TPR_1        Tetratricopeptide repeat
    9.2e-17   59.7   4.8    0.00016   21.5   0.1    3.7  3  TPR_2        Tetratricopeptide repeat
    4.2e-15   55.1   7.9    1.1e-07   31.4   0.5    3.5  3  TPR_11       TPR repeat
    1.7e-08   34.1   6.1     0.0022   18.1   0.1    3.7  3  TPR_8        Tetratricopeptide repeat
    3.5e-08   33.3   3.1     0.0027   18.0   0.0    3.2  3  TPR_17       Tetratricopeptide repeat
      1e-06   29.3   1.2    0.00012   22.6   0.0    2.3  2  TPR_16       Tetratricopeptide repeat
    3.6e-06   27.3   0.1      0.029   15.2   0.0    3.5  3  TPR_14       Tetratricopeptide repeat
    4.2e-05   24.0   1.8      0.028   14.9   0.3    2.6  2  TPR_19       Tetratricopeptide repeat
     0.0026   18.3   0.9          1   10.2   0.2    3.3  3  TPR_6        Tetratricopeptide repeat
     0.0033   17.7   1.4      0.043   14.1   0.3    2.8  2  TPR_12       Tetratricopeptide repeat
     0.0037   16.5   0.8       0.21   10.8   0.1    2.2  2  TPR_15       Tetratricopeptide repeat
     0.0048   17.0   0.0       0.15   12.3   0.0    2.2  2  TPR_9        Tetratricopeptide repeat
     0.0074   15.1   1.1      0.014   14.2   0.4    1.8  3  DUF3808      Protein of unknown function (DUF3808)
  ------ inclusion threshold ------
      0.019   15.6   0.2        4.9    8.0   0.1    2.9  2  Sel1         Sel1 repeat
      0.055   13.5   2.4      0.059   13.4   0.7    2.0  1  MIT          MIT (microtubule interacting and transport) doma
      0.056   13.5   0.0         15    5.9   0.0    2.9  2  TPR_7        Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> Metallophos  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.4   0.1   2.3e-32   2.3e-29       3     202 ..     212     406 ..     211     408 .. 0.87

  Alignments for each domain:
  == domain 1  score: 103.4 bits;  conditional E-value: 2.3e-32
                  EEEEESBTBTTCCTHHHHHHHHHHHH..HHHTTESEEEEESTSSSSSHHHHHHHHH.HHHHHHHTSEEEEEC-TTS........CHHHHHHHHHHHHH CS
  Metallophos   3 ilvigDlHlalgggqlddllkllddl..lreekpdlvllaGDlvdrgdlekellel.laalvkypipvylllGNHe........gfeeellnkygylg 89 
                  ++v+gD+H     gq++dll++++    +++ + +l+   GD+vdrg++++e++   +a+++ yp+ ++l +GNHe        gfe e++ ky    
   EPX73129.1 212 LVVCGDTH-----GQFYDLLNIFKLHgyPSHTNKYLFN--GDFVDRGSWSTEVAFTlYAFKLLYPDSIFLNRGNHEtddmnkvyGFEGECKAKYN--- 299
                  79******.....**********777657777888888..*************99999**************************9999*****88... PP

                  HHHHHHEHHHCEEETSEEEEEETTEEEEEEEESE.CEEE.THHHHHHHHHHHSCHHHHCC.....HHHHHHHHHHTTCSEEEEEESSESS....CSSS CS
  Metallophos  90 ifsepwrsdaevfnnlplaslgsgslkvlllhGg.spel.lvsldklgslnleleapepg.....dewlkdlekrekadwvivlgHsply....rgsg 176
                     ++++ ++e+f +lpl  l+ +  ++l+lhGg +    +v+ld+l++++++ + + ++     + ++ d        +   +g         rg g
   EPX73129.1 300 --ERTFNIFSETFTALPLGTLIAD--TYLVLHGGlFS-NdNVTLDQLRKIDRFSTKQPGQsglmmEMLWTD--------PQTQPG----RgvskRGVG 380
                  ..7889999***************..********533.256888888888888877777677899889998........444444....25667**** PP

                  CSCCHHHHHHHHHHTTESEEEEESSS CS
  Metallophos 177 ylfgdealedllkkygvdlvisGHtH 202
                   +fg+++ +++++ +g+ ++i++H+ 
   EPX73129.1 381 LQFGPDVSKKFCEANGLRAIIRSHEV 406
                  ************************96 PP

>> PPP5  PPP5 TPR repeat region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.7   0.0   1.3e-29   1.3e-26       1      94 []     113     203 ..     113     203 .. 0.98

  Alignments for each domain:
  == domain 1  score: 92.7 bits;  conditional E-value: 1.3e-29
        PPP5   1 lkeceklirreaFekAIeveekesasetldlesieveksYdGprLeeeeekitqeFvkamierfkkgkklhkkyvyaillkvkellkkepslve 94 
                 l+ece l+++++F++AI+v++ +sa+e++++++++v+++YdG++L   + ++t+eFv +m+erf++gkkl+ ky+y il ++ke+ +k pslv+
  EPX73129.1 113 LRECEGLLKKIRFQEAIQVSDPPSALENVNIDDMDVSADYDGVEL---KAQMTEEFVFNMLERFQNGKKLPLKYAYSILRDIKEHYEKVPSLVD 203
                 689******************************************...778*****************************************97 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.1   9.7e-08   9.7e-05       1      34 []       5      38 ..       5      38 .. 0.94
   2 !   22.6   0.1   6.3e-08   6.2e-05       3      34 .]      41      72 ..      39      72 .. 0.92
   3 !   22.3   0.4   7.9e-08   7.8e-05       1      34 []      73     106 ..      73     106 .. 0.96

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 9.7e-08
                HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1  1 akalynlGnayfklgkydeAleyyekALelnPnn 34
                a +l+n +n  +k g+  +A+e y++A++l+ +n
  EPX73129.1  5 ALTLKNEANSALKEGNISKAVELYSEAIKLDSQN 38
                56899**************************886 PP

  == domain 2  score: 22.6 bits;  conditional E-value: 6.3e-08
                HHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1  3 alynlGnayfklgkydeAleyyekALelnPnn 34
                 + n+ +ay+kl+++  A+ + +kA+e++Pn+
  EPX73129.1 41 LYSNRSLAYLKLEDFGLAINDASKAIEIDPNF 72
                6888889***********************97 PP

  == domain 3  score: 22.3 bits;  conditional E-value: 7.9e-08
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   1 akalynlGnayfklgkydeAleyyekALelnPnn 34 
                 aka+y++++a+ +l ++++A+++y+ A+   Pn+
  EPX73129.1  73 AKAYYRRAAAHISLFQPKDAVKDYKMAVNKAPND 106
                 89**************************999986 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.1   5.7e-07   0.00057       2      34 .]       6      38 ..       5      38 .. 0.92
   2 !   21.5   0.1   1.6e-07   0.00016       1      33 [.      39      71 ..      39      72 .. 0.95
   3 !   18.8   0.3   1.2e-06    0.0012       1      34 []      73     106 ..      73     106 .. 0.97

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 5.7e-07
       TPR_2  2 ealynlGlayyklgdyeeAleafekAleldPnn 34
                  l n +++++k g+  +A+e++ +A++ld +n
  EPX73129.1  6 LTLKNEANSALKEGNISKAVELYSEAIKLDSQN 38
                56889************************9876 PP

  == domain 2  score: 21.5 bits;  conditional E-value: 1.6e-07
       TPR_2  1 aealynlGlayyklgdyeeAleafekAleldPn 33
                a ++ n+ lay+kl d+  A+++  kA+e+dPn
  EPX73129.1 39 AILYSNRSLAYLKLEDFGLAINDASKAIEIDPN 71
                6789****************************9 PP

  == domain 3  score: 18.8 bits;  conditional E-value: 1.2e-06
       TPR_2   1 aealynlGlayyklgdyeeAleafekAleldPnn 34 
                 a+a+y+++ a++ l ++++A+++++ A+  +Pn+
  EPX73129.1  73 AKAYYRRAAAHISLFQPKDAVKDYKMAVNKAPND 106
                 79******************************97 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4   0.5   1.1e-10   1.1e-07       6      41 ..      17      52 ..      12      53 .. 0.93
   2 !   21.3   2.0   1.6e-07   0.00016       3      38 ..      48      83 ..      47      86 .. 0.94
   3 !    7.1   0.0    0.0044       4.4      12      34 ..      91     113 ..      89     113 .. 0.94

  Alignments for each domain:
  == domain 1  score: 31.4 bits;  conditional E-value: 1.1e-10
      TPR_11  6 eqGkyeeAieaYkkAlkldPdnaeayynLGlayykq 41
                + G++ +A+e Y++A+kld++na +y+n+ lay+k+
  EPX73129.1 17 KEGNISKAVELYSEAIKLDSQNAILYSNRSLAYLKL 52
                78*******************************996 PP

  == domain 2  score: 21.3 bits;  conditional E-value: 1.6e-07
      TPR_11  3 ayyeqGkyeeAieaYkkAlkldPdnaeayynLGlay 38
                ay ++ ++  Ai++ +kA+++dP++a ayy +++a+
  EPX73129.1 48 AYLKLEDFGLAINDASKAIEIDPNFAKAYYRRAAAH 83
                7999999999***********************998 PP

  == domain 3  score: 7.1 bits;  conditional E-value: 0.0044
      TPR_11  12 eAieaYkkAlkldPdnaeayynL 34 
                 +A+++Yk A++  P++++a ++L
  EPX73129.1  91 DAVKDYKMAVNKAPNDVTARSKL 113
                 7******************9987 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.2   0.00077      0.77       8      34 .]      12      38 ..      10      38 .. 0.88
   2 !   18.1   0.1   2.2e-06    0.0022       3      33 ..      41      71 ..      39      72 .. 0.94
   3 !    7.4   0.1    0.0057       5.7       1      28 [.      73     100 ..      73     106 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00077
                HHHHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8  8 gsiylklgdyeeAkeyyekaleldpdn 34
                ++  lk g++ +A+e y +a++ld +n
  EPX73129.1 12 ANSALKEGNISKAVELYSEAIKLDSQN 38
                5667899*****************876 PP

  == domain 2  score: 18.1 bits;  conditional E-value: 2.2e-06
                HHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8  3 ayynlgsiylklgdyeeAkeyyekaleldpd 33
                +y n +++ylkl+d+  A+    ka+e+dp+
  EPX73129.1 41 LYSNRSLAYLKLEDFGLAINDASKAIEIDPN 71
                68899*************************8 PP

  == domain 3  score: 7.4 bits;  conditional E-value: 0.0057
                 CCHHHHHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_8   1 aeayynlgsiylklgdyeeAkeyyekal 28 
                 a+ayy+ + ++++l + + A++ y+ a+
  EPX73129.1  73 AKAYYRRAAAHISLFQPKDAVKDYKMAV 100
                 79**********************9776 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.3   4.2e-05     0.042       1      33 [.      27      59 ..      27      60 .. 0.94
   2 !   18.0   0.0   2.7e-06    0.0027       4      33 ..      64      93 ..      62      94 .. 0.91
   3 ?   -2.1   0.0       6.7   6.7e+03       2      16 ..      96     110 ..      95     113 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 4.2e-05
      TPR_17  1 lylkaleldPnnadaynnLAelllknGdlmtAr 33
                ly +a++ld  na +y n+  ++lk+ d++ A+
  EPX73129.1 27 LYSEAIKLDSQNAILYSNRSLAYLKLEDFGLAI 59
                799************************998885 PP

  == domain 2  score: 18.0 bits;  conditional E-value: 2.7e-06
      TPR_17  4 kaleldPnnadaynnLAelllknGdlmtAr 33
                ka+e+dPn a+ay+ +A ++ ++ ++++A+
  EPX73129.1 64 KAIEIDPNFAKAYYRRAAAHISLFQPKDAV 93
                9******************99999988886 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 6.7
      TPR_17   2 ylkaleldPnnaday 16 
                 y+ a+ + Pn++ a 
  EPX73129.1  96 YKMAVNKAPNDVTAR 110
                 77788899**99876 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.0   1.2e-07   0.00012       2      65 ..      10      70 ..       9      71 .. 0.90
   2 !   13.4   0.4   9.2e-05     0.092       5      67 ..      47     106 ..      43     107 .. 0.91

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 1.2e-07
      TPR_16  2 alaraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalraap 65
                ++a++al+ g+  +A++++ +a+k+d   +++a  + ++ +a+l++ ++ +A+    +a++ +p
  EPX73129.1 10 NEANSALKEGNISKAVELYSEAIKLD---SQNAILYSNRSLAYLKLEDFGLAINDASKAIEIDP 70
                589***********************...************************55555556666 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 9.2e-05
      TPR_16   5 raalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalraapda 67 
                 +a+l++ d+  A++ +  a++ d   P  a A++ ++ a+  +   ++A+  y+ a+  ap++
  EPX73129.1  47 LAYLKLEDFGLAINDASKAIEID---PNFAKAYYRRAAAHISLFQPKDAVKDYKMAVNKAPND 106
                 79*********************...**************99999999999999998777775 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.046        46      11      35 ..      15      39 ..      11      45 .. 0.84
   2 !    8.6   0.2    0.0038       3.8       9      42 ..      47      80 ..      40      81 .. 0.91
   3 !   15.2   0.0   2.9e-05     0.029       2      38 ..      74     110 ..      73     114 .. 0.94

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.046
      TPR_14 11 llalGdpdeAiallrralalaPdda 35
                 l  G+  +A++l+ +a++l+ ++a
  EPX73129.1 15 ALKEGNISKAVELYSEAIKLDSQNA 39
                56789**************987776 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0038
      TPR_14  9 eallalGdpdeAiallrralalaPddaeawllla 42
                 a+l l+d+  Ai+ + +a++ +P++a a+++ a
  EPX73129.1 47 LAYLKLEDFGLAINDASKAIEIDPNFAKAYYRRA 80
                6899*************************99877 PP

  == domain 3  score: 15.2 bits;  conditional E-value: 2.9e-05
      TPR_14   2 eallalaeallalGdpdeAiallrralalaPddaeaw 38 
                 +a++++a+a+  l +p++A++ ++ a+ +aP+d +a+
  EPX73129.1  74 KAYYRRAAAHISLFQPKDAVKDYKMAVNKAPNDVTAR 110
                 79*******************************9998 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.1   0.00092      0.91       1      41 [.      15      55 ..      15      60 .. 0.89
   2 !   14.9   0.3   2.8e-05     0.028       4      65 ..      52     113 ..      49     116 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00092
      TPR_19  1 llaegdyaeAlalleqalqedpknaearllLAeallalgql 41
                +l+eg+   A++l+++a++ d +na +  +   a+l+l ++
  EPX73129.1 15 ALKEGNISKAVELYSEAIKLDSQNAILYSNRSLAYLKLEDF 55
                699**********************9999999999998887 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 2.8e-05
      TPR_19   4 egdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpddaryasLl 65 
                  +d+  A++  ++a++ dp+ a a ++ A a+++l q+++A +  + + +++p+d  ++s l
  EPX73129.1  52 LEDFGLAINDASKAIEIDPNFAKAYYRRAAAHISLFQPKDAVKDYKMAVNKAPNDVTARSKL 113
                 5789999***********************************99999999999986666655 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0      0.06        60       7      28 ..      12      33 ..      10      37 .. 0.85
   2 ?   -1.1   0.0       3.9   3.9e+03       8      29 ..      47      68 ..      44      71 .. 0.56
   3 !   10.2   0.2     0.001         1       2      32 ..      75     105 ..      74     106 .. 0.96

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.06
                HHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6  7 alsyrklgdtdkAlealerlik 28
                a s +k g+ +kA+e++ + ik
  EPX73129.1 12 ANSALKEGNISKAVELYSEAIK 33
                56778888**********9997 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 3.9
                HHHHHH.......HHHHHHHHHHHHHHHH CS
       TPR_6  8 lsyrkl.......gdtdkAlealerlike 29
                l+y+kl       +d++kA+e        
  EPX73129.1 47 LAYLKLedfglaiNDASKAIE-------I 68
                788887344444455555554.......4 PP

  == domain 3  score: 10.2 bits;  conditional E-value: 0.001
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6   2 AlyklalsyrklgdtdkAlealerlikeYPd 32 
                 A+y++a ++++l ++ +A++ ++  +++ P+
  EPX73129.1  75 AYYRRAAAHISLFQPKDAVKDYKMAVNKAPN 105
                 9**********99*****************9 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.3   4.3e-05     0.043       5      76 ..       7      70 ..       3      71 .. 0.85
   2 !    7.5   0.3    0.0049       4.9       3      55 ..      39      83 ..      36     105 .. 0.62

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 4.3e-05
      TPR_12  5 alnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealaiae 76
                +l n a+  ++ g+  +A el+ +a+ +       +    a+ + n + +y++l+++  A++   +a++i++
  EPX73129.1  7 TLKNEANSALKEGNISKAVELYSEAIKLD-----SQ---NAILYSNRSLAYLKLEDFGLAINDASKAIEIDP 70
                56688888999999999999999997777.....44...59**************************99975 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0049
      TPR_12  3 atalnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrly 55
                a++++n+ +++++l+++  A+    ka+ei      p+    a +++  + ++
  EPX73129.1 39 AILYSNRSLAYLKLEDFGLAINDASKAIEID-----PN---FAKAYYRRAAAH 83
                5667777777777777777777777777776.....43...344455555555 PP

>> TPR_15  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.1     0.018        18     144     180 ..       3      39 ..       1      53 [. 0.89
   2 !   10.8   0.1   0.00021      0.21     147     186 ..      74     113 ..      39     113 .. 0.86

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.018
      TPR_15 144 qsaafllaraelyrqegqtdaAlrdyreAlalapdss 180
                 ++a+ l   a+++++eg+  +A+++y eA++l+ +++
  EPX73129.1   3 KDALTLKNEANSALKEGNISKAVELYSEAIKLDSQNA 39 
                 6888899999**********************99976 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00021
      TPR_15 147 afllaraelyrqegqtdaAlrdyreAlalapdsselraal 186
                   +++ra+++    q+++A++dy+ A+++ap++ ++r++l
  EPX73129.1  74 KAYYRRAAAHISLFQPKDAVKDYKMAVNKAPNDVTARSKL 113
                 4578999*****************************9976 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.0   0.00049      0.49       4      61 ..      14      71 ..      12      76 .. 0.91
   2 !   12.3   0.0   0.00015      0.15       5      66 ..      49     110 ..      48     114 .. 0.95

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00049
       TPR_9  4 iaireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapd 61
                 a+ e + ++a + +   + l+++ + ++  R l++ +l+++  A++d   +++++p+
  EPX73129.1 14 SALKEGNISKAVELYSEAIKLDSQNAILYSNRSLAYLKLEDFGLAINDASKAIEIDPN 71
                57888899999999999************************************99996 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 0.00015
       TPR_9   5 aireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapdapdae 66 
                 ++  ed+  a+  +   + ++P+ +  ++ R+ ++  l +++ A++d   ++ +ap++ +a+
  EPX73129.1  49 YLKLEDFGLAINDASKAIEIDPNFAKAYYRRAAAHISLFQPKDAVKDYKMAVNKAPNDVTAR 110
                 78889999************************************************999987 PP

>> DUF3808  Protein of unknown function (DUF3808)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.4   1.4e-05     0.014     269     386 ..       5     126 ..       2     132 .. 0.83
   2 ?   -2.7   0.0       1.8   1.8e+03     123     140 ..     181     198 ..     164     206 .. 0.80
   3 ?   -3.4   0.0       2.9   2.9e+03     395     420 ..     341     366 ..     340     367 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 1.4e-05
     DUF3808 269 alwllfearieslkgnldeAlelleeiieesqselkqvkhlclfelaltlvylheykeaaesfleLlkls.kwSkalYtYlaaacllelgre....... 359
                 al l +ea     +gn+ +A+el++e+i     +l   +++++ +++l+++ l ++  a++++++ +++  ++ ka+Y+  aa + l  +++       
  EPX73129.1   5 ALTLKNEANSALKEGNISKAVELYSEAI-----KLDSQNAILYSNRSLAYLKLEDFGLAINDASKAIEIDpNFAKAYYRRAAAHISLFQPKDavkdykm 98 
                 5667789999999************998.....44445799************************99997479**********9999999998888888 PP

     DUF3808 360 ..ekkaeakekaeelfkevpkllqkkagk 386
                   +k+++   +a + ++e + ll+k++++
  EPX73129.1  99 avNKAPND-VTARSKLRECEGLLKKIRFQ 126
                 74444444.77888888899999988884 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1.8
     DUF3808 123 lRkaYqiykeilkeikkl 140
                 l+ aY+i+++i+++++k+
  EPX73129.1 181 LKYAYSILRDIKEHYEKV 198
                 778899999888888765 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 2.9
     DUF3808 395 lrKverfkarkkekkselldavlvsp 420
                 lrK++rf+++++ +++ ++++++++p
  EPX73129.1 341 LRKIDRFSTKQPGQSGLMMEMLWTDP 366
                 69*******99867777777777776 PP

>> Sel1  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.059        59      21      37 ..      19      35 ..      13      36 .. 0.86
   2 ?    8.0   0.1    0.0049       4.9      21      36 ..      64      83 ..      43      85 .. 0.71

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.059
        Sel1 21 kDpekAiewyekAAeqG 37
                 +++kA+e+y  A +++
  EPX73129.1 19 GNISKAVELYSEAIKLD 35
                499**********9987 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0049
        Sel1 21 k....DpekAiewyekAAeq 36
                k    Dp+ A  +y++AA++
  EPX73129.1 64 KaieiDPNFAKAYYRRAAAH 83
                335569************98 PP

>> MIT  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.7   5.9e-05     0.059       3      33 ..       4      34 ..       2      37 .. 0.93

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 5.9e-05
         MIT  3 kAlelvkkAveeDnagnyeeAlelYkealel 33
                 Al l ++A  + ++gn+++A+elY+ea++l
  EPX73129.1  4 DALTLKNEANSALKEGNISKAVELYSEAIKL 34
                699999**********************985 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0     0.044        44       8      31 ..      14      35 ..       7      40 .. 0.75
   2 ?    5.9   0.0     0.015        15       1      35 [.      75     107 ..      75     108 .. 0.92

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.044
       TPR_7  8 lysrlGdyeeAielyeqsLaltkd 31
                   ++G+ ++A+ely +  a+  d
  EPX73129.1 14 SALKEGNISKAVELYSE--AIKLD 35
                556899*********99..55544 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.015
       TPR_7   1 aLlnLarlysrlGdyeeAielyeqsLaltkdpeda 35 
                 a+++ a ++ +l + ++A++ y+   a+ k+p+d+
  EPX73129.1  75 AYYRRAAAHISLFQPKDAVKDYKM--AVNKAPNDV 107
                 6889999*****************..****99997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (473 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       436  (0.0243181); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.58u 0.28s 00:00:00.86 Elapsed: 00:00:00.48
# Mc/sec: 2986.90
//
Query:       EPX73130.1  [L=549]
Description: vacuolar membrane alkaline phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.5e-96  321.8   0.0    7.8e-96  321.6   0.0    1.0  1  Alk_phosphatase  Alkaline phosphatase
    0.00032   20.1   0.0    0.00083   18.8   0.0    1.7  2  Metalloenzyme    Metalloenzyme superfamily


Domain annotation for each model (and alignments):
>> Alk_phosphatase  Alkaline phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  321.6   0.0  8.7e-100   7.8e-96       4     415 ..      63     491 ..      60     492 .. 0.88

  Alignments for each domain:
  == domain 1  score: 321.6 bits;  conditional E-value: 8.7e-100
                      EEEEEETT-SHHHHHHHHHHHCHCTCSSSTTS.TTGGG-SEEEEEESSECSTTSSGHHHHHHHHHHSSBTBTT-BSB-TTST-B---HHHHHHH CS
  Alk_phosphatase   4 villigDGmgvstvtaaRslkeqakdklgeetllamdrfplvglsktyavdkqvtDSaataTAyacgvktyngaigvdaaagkevksvleaAkk 97 
                       +++++DGmg++++++ Rs++e  +++   +  l +d+  l+g+s+t+++ + +tDSaa+aTA++c+ k+ynga+gv    gk + ++leaAk+
       EPX73130.1  63 AVMMVSDGMGPASLSMSRSFAEYITGEK--DYILPLDKH-LIGSSRTRSSSSLITDSAAGATAFSCAAKSYNGAVGVLDG-GKACGTILEAAKE 152
                      69*********************99995..888899996.9************************************999.************* PP

                      TT-EEEEEEEEETTSHHHHTTTTTBSSTTSSSHHHSTCCCHHTTS-SHHHHHHHCST-SEEEEESCGGGSBCSBCTSSTCCT.SBHHHHHCCT. CS
  Alk_phosphatase  98 aGkstGlVtTtritdAtPaalvahvesRkwkedaavpaealeegkkdiaeqlikakkidvllGGGrkeffpaeyatdGerkdGrnlieeakkk. 190
                       G+ tG+V+T+ritdAtPa++++hv++R  ++++         ++ ++   ++ +   d+++GGG   f+p+   +  +  d  +l e ak++ 
       EPX73130.1 153 SGYLTGMVVTSRITDATPASFSSHVANR-FMQSLI--------AEYQVGMGPLGR-TTDLMFGGGLCSFLPNSSYQSCRADD-LDLLEYAKAQq 235
                      ****************************.666676........6999********.*************9987777766666.*******7665 PP

                      TCEEE-SHHHHHHHCTSTSSCEEEESSSSSCS-CCCSCTCCE--HHHHHHHHHHHH....TTSTT-EEEEEEETCHHHHHHTTTHHHHHHHHHH CS
  Alk_phosphatase 191 gyqyvsdrkeLlkakeenvkplLGLFadgdlkveldrdeatdPsLkemtevAiklL....sknekGFFLlVEGsrIDhaaHendavgalsEvve 280
                       ++++ dr+++  ak+++  plLGLF ++++ +++drd++ +PsL em+e+A+++L    +  +kGFFLl+EGsrID a H+nd+v  +++v+e
       EPX73130.1 236 NFHVLLDRADFDDAKKQQ-LPLLGLFSGHHMDYNIDRDPKSQPSLTEMVESALDTLykasQSTDKGFFLLIEGSRIDMASHNNDPVAHVHDVLE 328
                      99***********99999.*************************************77755556****************************** PP

                      HHHHHHHHHHHCHHCTTEEEEEEESSEESEEEESTTST.......T..TTSEECCEET.TTSSEE.......................CEEECC CS
  Alk_phosphatase 281 fdeAvkaalefakkeketlvvvTaDHshvfsfggyttr.......gesvlglepllaa.dkkpvl.......................lllYgn 343
                       ++A+++a ef +  +  ++++T+DH++    gg+t++       +e+ + +e+l  a ++ ++l                       l +  +
       EPX73130.1 329 YNRAFQKAAEFIE-RTGGVLISTSDHET----GGLTVGrqvtpeyPEYLWKPEVLERAsHSFEYLaksimvheesglhsyienyifpaLGI--K 415
                      *************.8999**********....666665566688999999999999886888888***********888888777653222..2 PP

                      STT......BTTB.....HHHHTSTT........EEE..SSHTEE-SSEEEEEESTTGGGGSCEEECCHHHHHHHHHCT CS
  Alk_phosphatase 344 geetke...lkgvredvtakeskead....yrkraavpltseeHtgedvavfAygpkaelvrGvqeqteiakvlaaale 415
                      +++ k+   l  ++ +v +  +         +++a++++t+++Ht++dv+v+  g  a+ ++G++e+ e++k l++ l+
       EPX73130.1 416 KPTRKMvnsLYAAKSNVFELIN---RmsliISEQAQIGYTTHGHTAVDVNVYGTGDAARDLKGNIENIEVGKYLEKYLG 491
                      3333330023333444433333...245589******************************************999875 PP

>> Metalloenzyme  Metalloenzyme superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0      0.65   5.8e+03       3      14 ..      63      74 ..      61      76 .. 0.82
   2 !   18.8   0.0   9.2e-08   0.00083     112     193 ..     275     361 ..     241     389 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 0.65
                   EEEEEETTBB-- CS
                   xxxxxxxxxxxx RF
  Metalloenzyme  3 vvlvvlDGlGea 14
                   +v++v DG+G a
     EPX73130.1 63 AVMMVSDGMGPA 74
                   789******965 PP

  == domain 2  score: 18.8 bits;  conditional E-value: 9.2e-08
                    TT--HHHHHHHHHHHH.CC.-S.....EEEEEE-HHHHHHHTT-HHHHHHHHHHHHHHHHHHHTTS-TTTEEEEEE-SSB--TTTSS CS
                    xxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Metalloenzyme 112 pemkavevaekaldailsgkfd.....lvvvniknaDmvGHtgdleatiaaieaaDeavkeildaieqvdgilvvtADHgnaedmvk 193
                     + +  e++e+ald++ + + +     ++++     Dm++H++d+ a ++ + ++ +a ++  + ie ++g+l+ t+DH +    v+
     EPX73130.1 275 SQPSLTEMVESALDTLYKASQStdkgfFLLIEGSRIDMASHNNDPVAHVHDVLEYNRAFQKAAEFIERTGGVLISTSDHETGGLTVG 361
                    555677888888888865433233888999999**********************************************88665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (549 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       388  (0.0216409); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.29s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 3698.67
//
Query:       EPX73131.1  [L=586]
Description: sorting nexin Snx41 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.3e-19   68.3   0.8    1.6e-18   66.7   0.8    1.8  1  PX             PX domain
  ------ inclusion threshold ------
       0.89    9.7   8.9      0.038   14.1   1.9    2.3  2  Tropomyosin_1  Tropomyosin like


Domain annotation for each model (and alignments):
>> PX  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.7   0.8   1.8e-22   1.6e-18      17     111 ..      85     181 ..      75     183 .. 0.93

  Alignments for each domain:
  == domain 1  score: 66.7 bits;  conditional E-value: 1.8e-22
                 SSEEEEEEEEEETTSSSEEEEEEEHHHHHHHHHHHHHHHTTSTSTSSSTSGSSSSS......CTTSHHHHHHHHHHHHHHHHHHHTSCHHHHSHHHHHH CS
          PX  17 kkhsyylyevelktgakewtvkRrYsdFeeLhskLlrkfprvkiPplPkkvlfgsv......rkkdeefiekrrkgLeeyLqrllnhpelrnsevlteF 109
                 ++++ ++y+++++++    +v+RrYs+F +L+ +L+r +p++ +P lP+k+ +  +       + +++ +e+r++ L+++L+r++ hp l +s+++ +F
  EPX73131.1  85 ERGNHVVYNIKVNNS----EVQRRYSEFASLRVQLERLYPTCLVPVLPDKHKIMDYvfnmtkSQRTTRLLEERKRLLQSFLRRVALHPILGKSDIFFKF 179
                 567889999999986....********************************99888*****98899********************************* PP

                 HH CS
          PX 110 Le 111
                 L+
  EPX73131.1 180 LS 181
                 *7 PP

>> Tropomyosin_1  Tropomyosin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   1.9   4.3e-06     0.038      18      87 ..     357     427 ..     353     432 .. 0.86
   2 ?   -2.2   0.8      0.48   4.3e+03      64      68 ..     505     509 ..     444     572 .. 0.54

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 4.3e-06
  Tropomyosin_1  18 eleekvKeleqenlekeqeiksLtkknqqleeevekleeklkeakekaees.ekkktnnealtrkiqlLEe 87 
                    +l +++K+l q+ +++eq+ + L+  +q  +e ++    +l ea ++a++s     +++e+l+ +++ L  
     EPX73131.1 357 DLLQRKKALLQQLERREQQANRLQSAIQGNDEVLDDETRNLLEASKSASQSiYGPGQQQENLNGRNDALHS 427
                    567899*****************************999999888888777725678999*******99865 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.48
  Tropomyosin_1  64 kaees 68 
                    +a+ +
     EPX73131.1 505 EANRH 509
                    33333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (586 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1152  (0.0642534); expected 358.6 (0.02)
Passed bias filter:                      536  (0.0298957); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.42
# Mc/sec: 4183.81
//
Query:       EPX73132.1  [L=494]
Description: ubiquitin-protein ligase E3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      7e-17   62.0   0.0    1.1e-16   61.3   0.0    1.3  1  LON_substr_bdg  ATP-dependent protease La (LON) substrate-bin
      6e-13   48.4  10.9    3.3e-09   36.5   5.5    2.6  2  zf-C3HC4_3      Zinc finger, C3HC4 type (RING finger)
    7.5e-13   48.1  21.8      1e-12   47.7  11.2    3.0  3  zf-C3HC4_2      Zinc finger, C3HC4 type (RING finger)
    1.5e-10   41.0  18.9    3.7e-05   23.8   4.3    3.7  3  zf-C3HC4_4      zinc finger of C3HC4-type, RING
      4e-10   39.4  18.6    5.5e-08   32.5   8.7    3.0  3  zf-C3HC4        Zinc finger, C3HC4 type (RING finger)
    2.1e-08   34.0   8.3    2.1e-08   34.0   8.3    3.0  3  zf-RING_5       zinc-RING finger domain
    2.6e-08   33.7  24.6      1e-07   31.8   7.5    3.3  3  zf-RING_UBOX    RING-type zinc-finger
    9.4e-08   32.3   8.3    9.4e-08   32.3   8.3    3.1  3  zf-RING_2       Ring finger domain
    1.5e-06   27.9  19.8      7e-05   22.6   8.0    2.9  3  Prok-RING_4     Prokaryotic RING finger family 4
     0.0018   18.5   3.4     0.0076   16.5   3.4    2.2  1  zf-rbx1         RING-H2 zinc finger domain
      0.003   17.7   0.4      0.067   13.4   0.0    3.2  4  U-box           U-box domain
     0.0033   17.5   5.7     0.0033   17.5   5.7    2.7  2  zf-RING_10      zinc RING finger of MSL2
  ------ inclusion threshold ------
      0.049   13.4  13.5       0.46   10.3   7.0    3.5  3  zf-RING_4       RING/Ubox like zinc-binding domain
        1.4    8.7   5.0        6.1    6.7   5.0    2.2  1  zf-RING_11      RING-like zinc finger


Domain annotation for each model (and alignments):
>> LON_substr_bdg  ATP-dependent protease La (LON) substrate-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.3   0.0   8.8e-20   1.1e-16       2     207 ..     261     477 ..     260     478 .. 0.82

  Alignments for each domain:
  == domain 1  score: 61.3 bits;  conditional E-value: 8.8e-20
  LON_substr_bdg   2 lpllpldnkvlfPgitlpltvsrpksiaaierlldkdkp.yigvflvkesqkdaideesisel..........ysvGtvarIvqilrlddgrikv 85 
                     lpl+ +  +v +P++++ l++++ ++  +i+++l+++k  +++++l     +d   e    el           ++Gt+ +I q++ l dgr  v
      EPX73132.1 261 LPLFIC--MVAYPRMPTFLHIFELRYHIMIKKCLESSKRfCMAMPLR--PHNDGRNE--HRELrnargqrlfcSEYGTILEIMQVEPLIDGRNLV 349
                     899999..99*****************************9*****99..33333222..4444555666667889******************** PP

  LON_substr_bdg  86 vlegleRvkikklekekeegylvaeveiiedd................s.epedsdslqkelkalvqeiiekikkslarellkllleielllkye 163
                      ++g   v+i ++  + +  ++++++e++ d+                     ++++l   +++++++   ++           ++   +  k+e
      EPX73132.1 350 ETRGSYSVRIIDF--RADGLFPRVKIEKHFDTplratplqfpepeyllMyGHLSNEELVNRVDDFYMDARRTYV---------HWVVPLIDIKAE 433
                     *************..77999******999665788888877777655414444455555677777777777777.........666555577777 PP

  LON_substr_bdg 164 dlenpyrLadlvaailpfsneekqelLeeldvedRlkkvlelLk 207
                     + ++ ++L++ ++++lp+s+ ek ++L+ ++++dRl +vl +L+
      EPX73132.1 434 ARNSISDLSYKITNLLPISELEKTRILQVDNPTDRLVLVLIWLT 477
                     7778888***********************************97 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.2     2e-05     0.026       4      33 ..      18      46 ..      15      53 .. 0.91
   2 !   36.5   5.5   2.6e-12   3.3e-09       2      45 ..     174     216 ..     173     220 .. 0.95

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 2e-05
                B-TTTSSSBS-EEETTEEEEEE-HHHHHHH CS
  zf-C3HC4_3  4 eCviClerprnvvllpCgHlvlCeeCaekl 33
                +C+ C++ p+  + lpCg + +C +C++ l
  EPX73132.1 18 LCPGCNSLPSWPITLPCGGT-VCRDCFRGL 46
                7*******************.*****9876 PP

  == domain 2  score: 36.5 bits;  conditional E-value: 2.6e-12
                 GSB-TTTSSSBS-EEETTEEEEEE-HHHHHHHHHTT-B-TTT-- CS
  zf-C3HC4_3   2 deeCviClerprnvvllpCgHlvlCeeCaekllkrkkkCpiCrr 45 
                 + eC+iC+    + v+ pCgH+ +C  C+ + + ++++Cp Cr+
  EPX73132.1 174 ELECQICFGMLYDPVVTPCGHT-FCGPCLMQAQTQSPQCPTCRS 216
                 679*******************.*********99*********7 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.4    0.0033       4.2       2      28 ..      19      44 ..      18      51 .. 0.82
   2 !   47.7  11.2   7.8e-16     1e-12       1      40 []     176     214 ..     176     214 .. 0.97
   3 ?   -3.0   0.1       5.3   6.8e+03      15      24 ..     288     297 ..     283     308 .. 0.55

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0033
  zf-C3HC4_2  2 CpiCldmlkdpsvvtpCgHvfCqkCil 28
                Cp C    + p  + pCg + C++C++
  EPX73132.1 19 CPGCNSLPSWP-ITLPCGGTVCRDCFR 44
                66677777777.788**********97 PP

  == domain 2  score: 47.7 bits;  conditional E-value: 7.8e-16
  zf-C3HC4_2   1 kCpiCldmlkdpsvvtpCgHvfCqkCilrsLeekneCPlC 40 
                 +C+iC+ ml+dp vvtpCgH+fC  C++++ +++ +CP+C
  EPX73132.1 176 ECQICFGMLYDP-VVTPCGHTFCGPCLMQAQTQSPQCPTC 214
                 6***********.*****************99999***** PP

  == domain 3  score: -3.0 bits;  conditional E-value: 5.3
  zf-C3HC4_2  15 vtpCgHvfCq 24 
                 +++C  +  +
  EPX73132.1 288 IKKCLESSKR 297
                 4455444333 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   1.7   3.1e-06     0.004       1      29 [.      19      47 ..      19      58 .. 0.89
   2 !   23.8   4.3   2.9e-08   3.7e-05       1      31 [.     177     207 ..     177     210 .. 0.93
   3 !    8.3   0.2     0.002       2.6       1      22 [.     211     232 ..     211     238 .. 0.87

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 3.1e-06
  zf-C3HC4_4  1 CPiCldYLekPvsleCGhsfClsCisslq 29
                CP C ++ + P++l+CG ++C  C   l 
  EPX73132.1 19 CPGCNSLPSWPITLPCGGTVCRDCFRGLY 47
                ************************87665 PP

  == domain 2  score: 23.8 bits;  conditional E-value: 2.9e-08
  zf-C3HC4_4   1 CPiCldYLekPvsleCGhsfClsCisslqke 31 
                 C iC   L +Pv  +CGh+fC  C+ + q +
  EPX73132.1 177 CQICFGMLYDPVVTPCGHTFCGPCLMQAQTQ 207
                 9************************998876 PP

  == domain 3  score: 8.3 bits;  conditional E-value: 0.002
  zf-C3HC4_4   1 CPiCldYLekPvsleCGhsfCl 22 
                 CP C+++L  Pv le   s C+
  EPX73132.1 211 CPTCRSLLPSPVVLEHAKSRCI 232
                 **************98777775 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.1     4e-05     0.051       1      31 [.      19      48 ..      19      57 .. 0.89
   2 !   32.5   8.7   4.3e-11   5.5e-08       1      41 []     177     214 ..     177     214 .. 0.98
   3 ?   -3.6   0.3       8.7   1.1e+04      27      35 ..     289     296 ..     285     300 .. 0.48

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 4e-05
                -TTT-S--SS-E.E-TTS--B-CHHHHHHHH CS
    zf-C3HC4  1 CpiCleeakepnelleCkHsfCskCirkilk 31
                Cp C + ++ p  +l+C+ ++C++C r ++ 
  EPX73132.1 19 CPGCNSLPSWPI-TLPCGGTVCRDCFRGLYT 48
                999*********.************998876 PP

  == domain 2  score: 32.5 bits;  conditional E-value: 4.3e-11
                 -TTT-S--SS-E.E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepnelleCkHsfCskCirkilksrkkvkCPlC 41 
                 C+iC+ ++ +p+ +++C+H+fC +C+ + +   ++ +CP+C
  EPX73132.1 177 CQICFGMLYDPV-VTPCGHTFCGPCLMQAQT--QSPQCPTC 214
                 ************.******************..9999**** PP

  == domain 3  score: -3.6 bits;  conditional E-value: 8.7
                 HHHHHCTSS CS
    zf-C3HC4  27 rkilksrkk 35 
                 +k+l+ ++k
  EPX73132.1 289 KKCLE-SSK 296
                 44444.333 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.1   0.9    0.0085        11      13      33 ..      27      47 ..      18      65 .. 0.78
   2 !   34.0   8.3   1.7e-11   2.1e-08       1      43 [.     176     215 ..     176     216 .. 0.97
   3 ?   -3.5   0.2       8.2     1e+04      22      33 ..     285     296 ..     284     300 .. 0.61

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0085
   zf-RING_5 13 ekfyltsCgHifCekClkkll 33
                + +++++Cg ++C +C++ l 
  EPX73132.1 27 SWPITLPCGGTVCRDCFRGLY 47
                56889***********99765 PP

  == domain 2  score: 34.0 bits;  conditional E-value: 1.7e-11
   zf-RING_5   1 hCnkCfeklskeekfyltsCgHifCekClkkllekeavCpiCr 43 
                 +C++Cf  l    ++++t+CgH+fC  Cl+++++++ +Cp+Cr
  EPX73132.1 176 ECQICFGML---YDPVVTPCGHTFCGPCLMQAQTQSPQCPTCR 215
                 6********...9*****************************9 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 8.2
   zf-RING_5  22 HifCekClkkll 33 
                 Hi+ +kCl  ++
  EPX73132.1 285 HIMIKKCLESSK 296
                 666677776655 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   3.1   0.00012      0.15       1      26 [.      19      47 ..      19      64 .. 0.74
   2 !   31.8   7.5   8.2e-11     1e-07       1      39 []     177     212 ..     177     214 .. 0.86
   3 ?    0.3   0.4      0.59   7.5e+02       1      12 [.     211     222 ..     211     226 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00012
  zf-RING_UBOX  1 CpIClelftdPlv.lpCGHtFCreCl...w 26
                  Cp C++l + P + lpCG t Cr+C     
    EPX73132.1 19 CPGCNSLPSWP-ItLPCGGTVCRDCFrglY 47
                  999***9999*.636**********94431 PP

  == domain 2  score: 31.8 bits;  conditional E-value: 8.2e-11
  zf-RING_UBOX   1 CpIClelftdPlvlpCGHtFCreClwelskslegafkCP 39 
                   C IC+  + dP+v+pCGHtFC +Cl    + + ++ +CP
    EPX73132.1 177 CQICFGMLYDPVVTPCGHTFCGPCL---MQAQTQSPQCP 212
                   *****7777**557***********...77888888887 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 0.59
  zf-RING_UBOX   1 CpIClelftdPl 12 
                   Cp C++l+  P+
    EPX73132.1 211 CPTCRSLLPSPV 222
                   ********8884 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.8    0.0038       4.8       3      32 ..      19      45 ..      17      66 .. 0.73
   2 !   32.3   8.3   7.4e-11   9.4e-08       2      44 .]     176     215 ..     175     215 .. 0.86
   3 ?   -3.2   0.1       8.6   1.1e+04      23      32 ..     285     294 ..     283     301 .. 0.54

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0038
   zf-RING_2  3 CpICleelssadsvl.llpCgHvfhreCler 32
                Cp C ++l    s++ +lpCg + +r+C++ 
  EPX73132.1 19 CPGC-NSL---PSWPiTLPCGGTVCRDCFRG 45
                6666.334...4455256**********965 PP

  == domain 2  score: 32.3 bits;  conditional E-value: 7.4e-11
   zf-RING_2   2 eCpICleelssadsvlllpCgHvfhreClerwlrssstCPlCr 44 
                 eC IC+  l   ++++++pCgH+f+  Cl++  ++s++CP+Cr
  EPX73132.1 176 ECQICFGML---YDPVVTPCGHTFCGPCLMQAQTQSPQCPTCR 215
                 8****8666...4556678************9999999****9 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 8.6
   zf-RING_2  23 HvfhreCler 32 
                 H++ ++Cle 
  EPX73132.1 285 HIMIKKCLES 294
                 5555666543 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.4   4.7e-05      0.06       1      27 [.      19      45 ..      19      51 .. 0.87
   2 !   22.6   8.0   5.5e-08     7e-05       1      38 [.     177     216 ..     177     220 .. 0.91
   3 ?   -2.2   0.2       3.1     4e+03      18      29 ..     285     296 ..     284     299 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 4.7e-05
  Prok-RING_4  1 CvlCgeqekkailepCgHlvCkeCfds 27
                 C  C++ ++ +i  pCg  vC++Cf +
   EPX73132.1 19 CPGCNSLPSWPITLPCGGTVCRDCFRG 45
                 7779999999999************87 PP

  == domain 2  score: 22.6 bits;  conditional E-value: 5.5e-08
  Prok-RING_4   1 CvlCgeqekkailepCgHlvCkeCfdskdls..sCPlCqr 38 
                  C +C     ++++ pCgH +C  C+ +++ +  +CP C++
   EPX73132.1 177 CQICFGMLYDPVVTPCGHTFCGPCLMQAQTQspQCPTCRS 216
                  999999999*****************99888789****96 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 3.1
  Prok-RING_4  18 HlvCkeCfdskd 29 
                  H++ k+C++s++
   EPX73132.1 285 HIMIKKCLESSK 296
                  99999**99876 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   3.4   5.9e-06    0.0076      27      55 .]     187     215 ..     162     215 .. 0.86

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 5.9e-06
     zf-rbx1  27 vvlGeCgHaFHlhCiskWlktrkvCPlcr 55 
                 +v+  CgH+F   C+ +  +++ +CP+cr
  EPX73132.1 187 PVVTPCGHTFCGPCLMQAQTQSPQCPTCR 215
                 56779***********************8 PP

>> U-box  U-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0       0.8     1e+03       4      27 ..      16      39 ..      13      44 .. 0.87
   2 ?   -3.3   0.0       8.3   1.1e+04      22      37 ..     134     149 ..     132     163 .. 0.62
   3 !   13.4   0.0   5.3e-05     0.067       4      59 ..     174     228 ..     171     238 .. 0.82
   4 ?   -2.2   0.0       3.7   4.7e+03      30      69 ..     372     414 ..     368     417 .. 0.55

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.8
                GGB-TTT-SB-SSEEEETTTEEEE CS
       U-box  4 efldpitlelmkdPvilpsgvvvd 27
                +fl+p    l   P+ lp g +v 
  EPX73132.1 16 YFLCPGCNSLPSWPITLPCGGTVC 39
                89*****************97765 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 8.3
                 TTEEEEHHHHHHHHTT CS
       U-box  22 sgvvvdrstiekhlls 37 
                 sg++++ ++++ +  +
  EPX73132.1 134 SGISIEEEAMQDFPTN 149
                 6666666666655444 PP

  == domain 3  score: 13.4 bits;  conditional E-value: 5.3e-05
                 GGB-TTT-SB-SSEEEETTTEEEEHHHHHHHHTT.SSB-TTT-SB--GGGSEE-HH CS
       U-box   4 efldpitlelmkdPvilpsgvvvdrstiekhllsrdktdPftrepltqdqlipnle 59 
                 e+ ++i + ++ dPv++p g+++    + +   + ++ +P  r+ l++  ++ + +
  EPX73132.1 174 ELECQICFGMLYDPVVTPCGHTFCGPCLMQAQTQ-SPQCPTCRSLLPSPVVLEHAK 228
                 889*****************99888887777776.899**9999999888877754 PP

  == domain 4  score: -2.2 bits;  conditional E-value: 3.7
                 HHHHHHTT.SSB-TTT...-SB--GGGSEE-HHHHHHHHHHHH CS
       U-box  30 tiekhllsrdktdPft...repltqdqlipnlelKekIdefle 69 
                  iekh +   +  P+     e l +   ++n+el +++d f +
  EPX73132.1 372 KIEKHFDTPLRATPLQfpePEYLLMYGHLSNEELVNRVDDFYM 414
                 5666666655555544312233444445667777777777765 PP

>> zf-RING_10  zinc RING finger of MSL2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.5     0.012        15       7      32 ..      23      45 ..      17      51 .. 0.79
   2 !   17.5   5.7   2.6e-06    0.0033       1      45 [.     175     216 ..     175     242 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.012
  zf-RING_10  7 ckLLvdPlepkekeCqHyvCrlCvgk 32
                 +L   P  p +  C+  vCr C ++
  EPX73132.1 23 NSL---PSWPITLPCGGTVCRDCFRG 45
                444...77888899*********987 PP

  == domain 2  score: 17.5 bits;  conditional E-value: 2.6e-06
  zf-RING_10   1 lsCvvCckLLvdPlepkekeCqHyvCrlCvgkkkklkpsCsqCkd 45 
                 l C +C  +L dP+      C+H  C  C+ + +   p+C++C++
  EPX73132.1 175 LECQICFGMLYDPVVT---PCGHTFCGPCLMQAQTQSPQCPTCRS 216
                 68*********99865...8***********************94 PP

>> zf-RING_4  RING/Ubox like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.41   5.2e+02      38      44 ..      17      23 ..       9      25 .. 0.81
   2 ?    4.0   0.1     0.035        45      19      32 ..      33      46 ..      32      55 .. 0.84
   3 ?   10.3   7.0   0.00036      0.46      19      45 ..     191     216 ..     177     217 .. 0.88

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.41
   zf-RING_4 38 grCPaCr 44
                + CP+C 
  EPX73132.1 17 FLCPGCN 23
                68****6 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.035
   zf-RING_4 19 eCgyqiClfCyhri 32
                +Cg  +C++C++ +
  EPX73132.1 33 PCGGTVCRDCFRGL 46
                6999*******866 PP

  == domain 3  score: 10.3 bits;  conditional E-value: 0.00036
   zf-RING_4  19 eCgyqiClfCyhrileeeegrCPaCre 45 
                 +Cg+ +C  C+ ++++ ++ +CP Cr+
  EPX73132.1 191 PCGHTFCGPCLMQAQT-QSPQCPTCRS 216
                 79************96.69*******6 PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   5.0    0.0047       6.1       1      28 [.     176     200 ..     176     201 .. 0.79

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0047
  zf-RING_11   1 eCsICLeefkpgqalfilpCsHtFHfkC 28 
                 eC IC   +   + + ++pC+HtF   C
  EPX73132.1 176 ECQICFGMLY--DPV-VTPCGHTFCGPC 200
                 89***99994..455.66******7666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (494 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       701  (0.0390987); expected 358.6 (0.02)
Passed bias filter:                      503  (0.0280551); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.55u 0.23s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 3596.34
//
Query:       EPX73133.1  [L=482]
Description: adenylosuccinate lyase Ade8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.3e-24   84.4   0.0    1.6e-23   83.6   0.0    1.3  1  Lyase_1   Lyase
    1.7e-15   57.3   0.0    1.2e-14   54.6   0.0    2.3  2  ADSL_C    Adenylosuccinate lyase C-terminus
  ------ inclusion threshold ------
       0.14   12.2   0.0       0.36   11.0   0.0    1.6  1  AsiA      Anti-Sigma Factor A


Domain annotation for each model (and alignments):
>> Lyase_1  Lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.6   0.0   2.7e-27   1.6e-23      55     308 ..      51     306 ..      13     309 .. 0.81

  Alignments for each domain:
  == domain 1  score: 83.6 bits;  conditional E-value: 2.7e-27
                 HHHHHHHCHCHHCGGHHHB.SSSSSHHHHHHHHHHHHHHHHTT...HSSGIIIIITTT--HHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT CS
     Lyase_1  55 kaldevleegklddqfvlk.viqegsgtavnmnlnevigellg...ekvepndkvhtgqSsnDqvpTalrlalkkalsekLlpaleqLidalkekakef 149
                 +  de ++  +l+d+++++ +  e++  + +++  +v++ +        ++++ +h g++s  + + a  ++l++ + + L+p+l + i  l++ +  +
  EPX73133.1  51 QITDEAIQ--QLKDHVQITaPEFETAAKEEKRQRHDVMAHIYTyglAAPAAAGIIHLGATSCFVTDNADLIFLRDGM-DILIPKLVNVIHRLSQWSMRY 146
                 44455555..3333344430344555566666677777744445567899***********999999999*******.66******************* PP

                 TT-EEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTCEETTTTTTTSSTTTSCCTHHHHHHHHHH....HHHCSTEESSSHHHHHHC-HH CS
     Lyase_1 150 kdvvkiGrThlqdAtPvtlgqelsayaealerdrerlkellkrllvellgggtavgtglnadpefaelvakela....kvtglpvkapnsfeavsdrDa 244
                 kdv+ +G+Th q+A+ +t g+    + ++l  d+ ++ ++++ +    ++g t++ + + a    ++  ++el     k++g+  +  + + ++ dr  
  EPX73133.1 147 KDVPTLGFTHYQPAQLTTVGKRATLWIQELLWDLRNFVRARNDIGFRGVKGTTGTQASFLALFDGDHDKVEELDelvaKLSGFD-TVYPVTGQTYDRKI 244
                 ***************************************************999888877655545555666653211444433.4555666******* PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHTSTTTSSEEEEGCCTSSC-TTSTTTEBTHHHHHHHHHHH CS
     Lyase_1 245 vvellgalkllatsLskfaeDlrllssgeaglvelslaesepGSSiMPgKvNPvqlElltgvag 308
                  +++l+ l+ +at   k+a D+rll++  + +ve+ + ++++GSS M  K+NP  +E + + a+
  EPX73133.1 245 DIDVLQPLASFATTAHKIATDIRLLAN--LKEVEEPFEAGQIGSSAMAYKRNPMRCERICSQAR 306
                 ***************************..****************************9987776 PP

>> ADSL_C  Adenylosuccinate lyase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.36   2.1e+03      12      58 ..      11      62 ..       8      68 .. 0.69
   2 !   54.6   0.0     2e-18   1.2e-14       1      72 [.     375     456 ..     375     457 .. 0.95

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.36
                HH.HTH-HHHHHHHHHHHHHHHHHC..HHHHHHT-HHHHC...HHCHHHHHT- CS
      ADSL_C 12 Lv.kglgReeAyelVqeaamkawee..llelLaadpevkk...seeeldalfd 58
                L+ ++ +Re  +   +e    +w++  l  l  a++++ +   ++e++++l d
  EPX73133.1 11 LTsRYASREMSHLFSREKRINTWRQlwL-NLAIAEQKLGLnqiTDEAIQQLKD 62
                6645889999999999999999999843.444455556633677777777766 PP

  == domain 2  score: 54.6 bits;  conditional E-value: 2e-18
                 TGGGHHHHHHHHHH.TH-HHHHHHHHHHHHHHHHHC.........HHHHHHT-HHHHCHHCHHHHHT-GGGCCTTHHHHHHH CS
      ADSL_C   1 GlifservllaLvk.glgReeAyelVqeaamkawee.........llelLaadpevkkseeeldalfdpayylgsadeivdr 72 
                 +++++e++++a++k g +R+e++e ++ ++++a +          l+e++++ + +   ++eld l+d ++++g+a+e+++ 
  EPX73133.1 375 PFMATENIIMAMTKhGASRHECHEQIRVLSHQAGRVvkeeggdndLIERIKNTAYFEPIHNELDSLLDASTFVGRAPEQTES 456
                 79***********66*******************99*********************8777******************986 PP

>> AsiA  Anti-Sigma Factor A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   6.1e-05      0.36      28      58 ..     179     209 ..     171     222 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 6.1e-05
                 SHHHHHHHHHHHT-.ESSSSE--HHHHHHHH CS
        AsiA  28 nrklfvellneiGvrtteGkkltqnsfrkiv 58 
                 + ++fv   n+iG+r  +G   tq sf  ++
  EPX73133.1 179 DLRNFVRARNDIGFRGVKGTTGTQASFLALF 209
                 5689***********************8776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (482 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       586  (0.0326845); expected 358.6 (0.02)
Passed bias filter:                      490  (0.02733); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 3379.39
//
Query:       EPX73134.1  [L=358]
Description: mediator complex subunit Med7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-53  180.6  13.9    1.6e-52  178.4  13.9    2.3  1  Med7        MED7 protein
  ------ inclusion threshold ------
       0.64    9.3   3.9       0.71    9.2   0.3    2.2  2  DUF4407     Domain of unknown function (DUF4407)
        1.7    9.1  10.7       0.15   12.5   1.4    2.3  2  T3SSipB     Type III cell invasion protein SipB
        8.8    4.1  12.2       0.39    8.6   2.6    2.1  2  V_ATPase_I  V-type ATPase 116kDa subunit family


Domain annotation for each model (and alignments):
>> Med7  MED7 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.4  13.9   3.6e-56   1.6e-52       2     190 ..      11     288 ..      10     289 .. 0.86

  Alignments for each domain:
  == domain 1  score: 178.4 bits;  conditional E-value: 3.6e-56
        Med7   2 saFPpPPpfyklfteenlkklkelkeeaekeeeeeedesaaeeqelelpkeLr.vlipPeppkegeYrvFGenwsllkdklpsLeeqgieqly...... 93 
                 saFPpPP +yklft+enl+k+k+  +++eke+ +e+ +++      e+ ++L  v+  P +p++g+Y +FG++w+l ++++psL+++gi+qly      
  EPX73134.1  11 SAFPPPPLYYKLFTKENLEKVKNRFTKKEKETPSENGDETL-----EEDQKLAeVFRVPTCPTSGTYLMFGDTWRL-ENVIPSLQDFGITQLYkglqde 103
                 99******************777666666666666555543.....334567769********************6.********************** PP

        Med7  94 ...........................................................eedesedr................................ 101
                                                                            +                                       
  EPX73134.1 104 edkietveynpktgvvygyghvglnafgdstsqskdgetshanegenslqkqekneekdK------Emesadrqeptalekndesltkseeiskpddtt 196
                 ****************************99999999999999999999988866665551......044455566666666666666677777788888 PP

        Med7 102 .....kkeLkkLlrslllnfleLlgillknPeqsefeekvedlrllliNmhhllNeyRphQAretlillleeqleekreeiekirkkceevkev 190
                      + eL+ L+ sl+lnfleLlgi++k+Peq  f ekve++r++l+Nmhhl+NeyRphQ+re+l +lle+qle+++++++ +++++++++ +
  EPX73134.1 197 iiprrAYELHLLSTSLMLNFLELLGIMSKAPEQ--FPEKVENIRVILLNMHHLINEYRPHQSRESLLMLLEKQLEHEESQLRSLNEHNAQIEHA 288
                 888889*************************99..*****************************************************999876 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.3   0.00016      0.71     171     221 ..     133     185 ..      17     197 .. 0.80
   2 ?    1.5   0.3     0.034   1.5e+02     131     198 ..     264     351 ..     237     358 .] 0.47

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00016
     DUF4407 171 k....gtgttgvaGkgpaakekkaqldaaqaelaelkakldatarlaalraelae 221
                 +    ++g+t  a +g++  +k+++++++++e+++++++  + ++l+++++ l++
  EPX73134.1 133 StsqsKDGETSHANEGENSLQKQEKNEEKDKEMESADRQ--EPTALEKNDESLTK 185
                 255557788889999999999******************..99999998888776 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.034
     DUF4407 131 ltaelaeleaqiaalqaeidaaearldalraeaqkeldgtk..............gtgttgvaGkgpaake................kkaqldaaqae 198
                 l+++l+ +e+q+++l++  ++ e +l++l+    +e   +k              g           +                   k+a+++aa ++
  EPX73134.1 264 LEKQLEHEESQLRSLNEHNAQIEHALKRLQSLDLDEEGKQKfiasvisstsqndyG----------SNSNDtkatgtssepnevdtiKNAKIEAALRD 351
                 45555555555555555555555555555543322222222355554432222221..........22211111222222233333344455554444 PP

>> T3SSipB  Type III cell invasion protein SipB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   2.3      0.11   4.8e+02      71     126 ..     133     192 ..     128     198 .. 0.76
   2 ?   12.5   1.4   3.3e-05      0.15      61     127 ..     263     328 ..     254     354 .. 0.82

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.11
                 HHHHHHHHHHHHHHHHHHHHTT---------CHHHHHHHHH......HHHHHHHHHHHHH CS
     T3SSipB  71 qaksaadaatkkvdeaqkrlkeLaPdePekakleaaeqQagaa....adalqadealqKk 126
                 +  +  d  t  ++e  ++l++ + +e + +++e a +Q   a     ++l ++e + K 
  EPX73134.1 133 STSQSKDGETSHANEGENSLQKQEKNEEKDKEMESADRQEPTAleknDESLTKSEEISKP 192
                 556666777889999999999999999999999999999887766666677777777665 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 3.3e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---------CHHHHHHHHH..HHHHHHHHHHHHHH CS
     T3SSipB  61 dleaaiekadqaksaadaatkkvdeaqkrlkeLaPdePekakleaaeqQagaaadalqadealqKkl 127
                  le++ e+ ++     ++ ++++++a+krl++L+ de +k+k  a ++  + + d ++ ++  +K++
  EPX73134.1 263 LLEKQLEHEESQLRSLNEHNAQIEHALKRLQSLDLDEEGKQKFIASVISSTSQNDYGSNSN-DTKAT 328
                 6899999999999999999************************999999998888877776.45555 PP

>> V_ATPase_I  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   2.3      0.02        89     648     673 ..     147     172 ..     106     198 .. 0.45
   2 ?    8.6   2.6   8.7e-05      0.39      59     146 ..     247     335 ..     213     355 .. 0.67

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.02
  V_ATPase_I 648 keeeee..eeeeeeeeeeeeeeeaeeee 673
                 + e  +  +++e++ee+++e+e+a+++e
  EPX73134.1 147 EGE--NslQKQEKNEEKDKEMESADRQE 172
                 111..11111111111111111111111 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 8.7e-05
  V_ATPase_I  59 a..eesleapeekeldeleeelekleeelkelnenleklkkelnelvelkavlekakefleee.eeeeeeeeseeeeeekeeeeeeeseee 146
                    e ++++++e+ l  le++le+ e++l++lne++ ++++ l++l+ l    e  ++f+++  +++++++  ++++++k++   ++se +
  EPX73134.1 247 LinEYRPHQSRESLLMLLEKQLEHEESQLRSLNEHNAQIEHALKRLQSLDLDEEGKQKFIASViSSTSQNDYGSNSNDTKATG--TSSEPN 335
                 243556677777788899*******************************9999999999988754444444433333332222..222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1882  (0.10497); expected 358.6 (0.02)
Passed bias filter:                      554  (0.0308997); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.28s 00:00:00.88 Elapsed: 00:00:00.46
# Mc/sec: 2344.00
//
Query:       EPX73135.1  [L=1236]
Description: ER-localized ubiquitin ligase Doa10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-16   58.7  13.3    7.8e-16   57.9  13.3    1.4  1  RINGv       RING-variant domain
  ------ inclusion threshold ------
        0.1   11.0   0.0       0.17   10.3   0.0    1.2  1  Orbi_NS1    Orbivirus non-structural protein NS1, or hydropho
       0.27   11.3   5.9        1.1    9.4   5.6    2.1  2  zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 fin


Domain annotation for each model (and alignments):
>> RINGv  RING-variant domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.9  13.3   1.3e-19   7.8e-16       1      48 []       8      54 ..       8      54 .. 1.00

  Alignments for each domain:
  == domain 1  score: 57.9 bits;  conditional E-value: 1.3e-19
                ETTTTEE-SSSS--B-SS--STCCCSB-HHHHHHHHHHTCT-SB-TTT CS
       RINGv  1 CriCleeeeeseplispCkCrGslklvHesClekWldekeantqCeiC 48
                Cr+C++e +e++pl++pCkC+Gs+++vH++Cl +Wl + +++++Ce+C
  EPX73135.1  8 CRVCRCEGTEDSPLFHPCKCTGSIRYVHQECLVEWLAH-SKKKHCELC 54
                **************************************.********* PP

>> Orbi_NS1  Orbivirus non-structural protein NS1, or hydrophobic tubular protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   2.8e-05      0.17     438     511 ..     466     534 ..     462     552 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 2.8e-05
    Orbi_NS1 438 fmlgrvllrweltkaqrsallrlfcfvcygyapradgtipdwn..nlgnfldiilkgpelsedederayatmfemv 511
                 +m grv++ w l   qr +++  fc+v+        gti dw    l n+  i+l+ p +s        +++f+m 
  EPX73135.1 466 YMTGRVFVEWTLFFVQRPTVILKFCWVIL-------GTISDWTlgGLFNLSKILLRLPGISSVGKSFGISSFFDMS 534
                 89*************************97.......5888887224557778999999999988888888888875 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   5.6   0.00018       1.1      34      84 ..       7      61 ..       2      62 .. 0.64
   2 ?   -1.9   0.0      0.58   3.4e+03      26      65 ..     984    1022 ..     982    1031 .. 0.76

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00018
                --TTCSTTT.TTS-EEE.BTTS...-EEEHHHHHHHHHHHSTSSB-TTTSSB--BE CS
  zf-ANAPC11 34 tcpsckfpG.ddcplvl.Gkck...hnfhlhcilkwletetskglcpmcrqtfklk 84
                 c  c+  G +d pl    kc+      h+ c+++wl+++  k++c +c+ +f++ 
  EPX73135.1  7 ICRVCRCEGtEDSPLFHpCKCTgsiRYVHQECLVEWLAHS-KKKHCELCKSQFRFT 61
                46666666623344443234542224579********865.6889******99875 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.58
                  TT-SBTTS--TTCSTTTTTS-EEEBTTS-EEEHHHHHHHH CS
  zf-ANAPC11   26 icrvsfdGtcpsckfpGddcplvlGkckhnfhlhcilkwl 65  
                  i rv f+   ps +f  d  + ++G c  +f ++ ++   
  EPX73135.1  984 IGRVLFKALFPS-TFEHDFYTYIIGFCALVFPMYSVYYVT 1022
                  667777777776.5788889999******99999887654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1236 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1159  (0.0646439); expected 358.6 (0.02)
Passed bias filter:                      548  (0.030565); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.83u 0.32s 00:00:01.14 Elapsed: 00:00:00.46
# Mc/sec: 8157.70
//
Query:       EPX73136.1  [L=594]
Description: iron-sulfur protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.8e-33  115.3   0.1    2.1e-18   67.1   0.0    3.4  2  ABC_tran         ABC transporter
    8.7e-14   51.1   4.5    8.7e-14   51.1   4.5    1.9  1  RLI              Possible Fer4-like domain in RNase L inhibit
    2.7e-11   43.8   5.3     0.0048   16.8   0.0    4.2  4  AAA_21           AAA domain, putative AbiEii toxin, Type IV T
      6e-10   38.9   3.8     0.0028   17.1   0.9    3.8  3  SMC_N            RecF/RecN/SMC N terminal domain
    2.8e-08   33.2   3.6    2.8e-08   33.2   3.6    2.8  3  Fer4             4Fe-4S binding domain
    2.8e-06   27.3   0.5      0.085   12.5   0.0    2.6  2  AAA_15           AAA ATPase domain
    1.3e-05   25.0   2.3    1.3e-05   25.0   2.3    2.4  2  Fer4_6           4Fe-4S binding domain
    3.7e-05   24.2   0.0      0.049   14.0   0.0    2.4  2  AAA_16           AAA ATPase domain
    3.7e-05   24.1   0.0      0.032   14.7   0.0    2.5  2  AAA              ATPase family associated with various cellul
    4.3e-05   23.5   8.5    0.00088   19.3   0.1    2.4  2  Fer4_10          4Fe-4S dicluster domain
    6.3e-05   23.0   0.0       0.06   13.3   0.0    2.4  2  Rad17            Rad17 P-loop domain
    0.00011   22.1   0.0       0.21   11.5   0.0    2.4  2  RsgA_GTPase      RsgA GTPase
    0.00015   22.0   0.3      0.026   14.8   0.0    2.6  2  AAA_22           AAA domain
    0.00017   21.3   0.4       0.67    9.7   0.0    2.5  2  AAA_29           P-loop containing region of AAA domain
    0.00021   21.3  11.2     0.0004   20.5  11.2    1.4  1  Fer4_21          4Fe-4S dicluster domain
      0.001   19.1   1.2      0.028   14.4   0.1    2.9  3  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
     0.0011   18.2   0.0       0.32   10.2   0.0    2.5  3  NB-ARC           NB-ARC domain
     0.0014   19.0   0.1       0.32   11.4   0.0    2.5  2  RNA_helicase     RNA helicase
     0.0015   18.3   2.5      0.092   12.5   0.1    2.3  2  AAA_24           AAA domain
     0.0025   18.4   1.4     0.0025   18.4   1.4    2.3  3  Fer4_7           4Fe-4S dicluster domain
     0.0026   17.8   1.2     0.0026   17.8   1.2    2.6  2  Fer4_2           4Fe-4S binding domain
     0.0038   17.3   0.4       0.36   10.9   0.0    2.6  2  MMR_HSR1         50S ribosome-binding GTPase
     0.0054   16.7   0.6       0.34   10.9   0.0    3.1  3  AAA_5            AAA domain (dynein-related subfamily)
     0.0057   16.8  11.4      0.013   15.7  11.4    1.6  1  Fer4_9           4Fe-4S dicluster domain
     0.0062   16.1   1.4      0.056   12.9   0.2    2.2  2  AAA_7            P-loop containing dynein motor region
     0.0084   15.8   0.1       0.51   10.0   0.0    2.5  2  AAA_30           AAA domain
     0.0087   17.0   0.3     0.0087   17.0   0.3    2.7  2  Fer4_16          4Fe-4S double cluster binding domain
  ------ inclusion threshold ------
      0.013   15.5   2.0       0.37   10.7   0.0    2.4  2  NACHT            NACHT domain
      0.015   15.8   0.1      0.015   15.8   0.1    2.5  2  Fer4_17          4Fe-4S dicluster domain
      0.016   14.8   3.5        0.2   11.3   0.1    2.3  2  SRP54            SRP54-type protein, GTPase domain
      0.018   14.4   0.1      0.043   13.2   0.1    1.6  1  ATPase           KaiC
      0.018   15.6   2.4        2.2    8.8   0.1    3.3  3  AAA_18           AAA domain
      0.024   14.9   0.2        2.3    8.5   0.0    2.9  2  AAA_28           AAA domain
      0.028   14.5   0.3          5    7.2   0.0    3.3  3  AAA_14           AAA domain
      0.029   14.6   0.0         12    6.2   0.0    2.5  2  SbcCD_C          Putative exonuclease SbcCD, C subunit
      0.029   14.5   0.6        2.6    8.2   0.0    2.7  2  AAA_33           AAA domain
      0.032   13.9   0.0        3.6    7.3   0.0    2.4  2  VirE             Virulence-associated protein E
      0.034   14.0   0.0       0.87    9.4   0.0    2.4  2  dNK              Deoxynucleoside kinase
      0.044   12.9   0.0        2.1    7.4   0.0    2.2  2  G-alpha          G-protein alpha subunit
      0.088   12.0   0.2        3.5    6.7   0.1    2.2  2  DUF815           Protein of unknown function (DUF815)
      0.097   11.9   0.0       0.25   10.6   0.0    1.6  1  Rad51            Rad51
       0.11   11.7   0.1       0.88    8.8   0.0    2.2  2  Septin           Septin
       0.13   12.6   1.1       0.63   10.4   0.0    2.2  2  AAA_19           AAA domain
       0.16   12.4   0.2       0.16   12.4   0.2    2.7  2  AAA_23           AAA domain
       0.25   11.6   1.4       0.83    9.9   0.1    2.2  2  Roc              Ras of Complex, Roc, domain of DAPkinase
       0.29   10.8   1.1       0.95    9.1   0.0    2.2  2  Sigma54_activat  Sigma-54 interaction domain
       0.31   11.7  14.8       0.19   12.3   2.8    2.5  2  Fer4_4           4Fe-4S binding domain
        1.1    9.1   3.3         13    5.6   0.2    2.9  2  NTPase_1         NTPase
        1.2    9.7  10.0       0.26   11.8   1.3    2.3  2  Fer4_8           4Fe-4S dicluster domain
        1.2   10.2  15.5       0.13   13.3   4.5    2.6  2  Fer4_3           4Fe-4S binding domain


Domain annotation for each model (and alignments):
>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.1   0.0     6e-21   2.1e-18       9     136 ..     102     248 ..     100     249 .. 0.78
   2 !   40.8   0.2   8.1e-13   2.9e-10       8     137 .]     373     485 ..     366     485 .. 0.75

  Alignments for each domain:
  == domain 1  score: 67.1 bits;  conditional E-value: 6e-21
                 ETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEE...........EETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH................. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................. RF
    ABC_tran   9 kegekvaivGenGaGKStLlkllagllkpteGei...........lldgkdlkeqeleslrkeigvlpqepqlfpeltvren................. 79 
                 ++g+++++vG nG GKSt lk+++g+lkp+ G+             ++g +l++  +++ + +i+ l              +                 
  EPX73136.1 102 RPGQVLGLVGTNGIGKSTALKIMSGKLKPNLGRYdnppdwaeivrYFRGSELQNFFTKVIEDNIKALI-------------Kpqyvdhipraiktgdkr 187
                 58*******************************95555555555444455555544444444444443.............034444445555555669 PP

                 ........HHHTCHHHHHHHSTTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTT CS
                 ........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  80 ........esdeeiekalsklglkelkdtvvksspssLSgGqkqrvalarallkkpkllllDEpt 136
                         + +++ e+++++++lk+l+++ +    ++LSgG+ qr a+a++  ++++++++DEp+
  EPX73136.1 188 vsallksrANNDNYEEVIEHMDLKHLQEREI----QHLSGGELQRFAIAAVATQNADVYMFDEPS 248
                 9999998888888******************....*****************************7 PP

  == domain 2  score: 40.8 bits;  conditional E-value: 8.1e-13
                 EETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHHHHHTC.HHHHHHHSTTGGTTCBGESTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   8 lkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvrenesdee.iekalsklglkelkdtvvkss 105
                 ++  e+v+++GenG+GK+t++k +a+ ++    ++       ++++ +++ k  g++ q   +f+++  r+   +++  +++ + l+++ + d+ v   
  EPX73136.1 373 FSDAEIVVLLGENGTGKTTFIKYMAKTSEL---KV-------SMKPQTIAPKFQGTVRQL--FFKKI--RSAFLNAKfQTEVCRPLNIDSIIDQEV--- 454
                 67789********************99874...55.......333455556666666666..33333..333223332456777788888777777... PP

                 SGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 106 pssLSgGqkqrvalarallkkpkllllDEpta 137
                   +LSgG+ qrva++ al   ++++l+DEp+a
  EPX73136.1 455 -LNLSGGELQRVAICLALGMPADVYLIDEPSA 485
                 .9****************************75 PP

>> RLI  Possible Fer4-like domain in RNase L inhibitor, RLI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.1   4.5   2.4e-16   8.7e-14       1      35 []       7      38 ..       7      38 .. 0.96

  Alignments for each domain:
  == domain 1  score: 51.1 bits;  conditional E-value: 2.4e-16
                --EEEES---------TTHHHHHTTSEEEESS--S CS
         RLI  1 mrlAivdadqCdPKKCtgkkcarfcpvrlvrtgkk 35
                +r+Aiv++d+C PKKC++ +c r+cpv  vrtgk+
  EPX73136.1  7 TRIAIVNEDKCRPKKCRQ-ECRRSCPV--VRTGKL 38
                59****************.********..****95 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.7    0.0011      0.38       3      21 ..     108     126 ..     106     150 .. 0.79
   2 !   16.8   0.0   1.3e-05    0.0048     197     273 ..     178     254 ..     127     272 .. 0.68
   3 !   10.2   0.0    0.0013      0.47       1      17 [.     378     394 ..     378     418 .. 0.92
   4 ?    5.8   0.0     0.029        10     241     272 ..     461     489 ..     444     514 .. 0.69

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.0011
      AAA_21   3 vliGpNgsGKSnLLdaldl 21 
                 +l+G Ng GKS+ L+++++
  EPX73136.1 108 GLVGTNGIGKSTALKIMSG 126
                 79**************964 PP

  == domain 2  score: 16.8 bits;  conditional E-value: 1.3e-05
      AAA_21 197 ielsdlgegeeliasvderlrer...gvvflengdgqelparelSdGtkrllalltallralkkgsllliDEpEngLHPk 273
                 +++ ++g++ ++  + +++++++    + +++ ++ qe+ + +lS G ++ +a+++   + +   +++ +DEp + L+ k
  EPX73136.1 178 PRAIKTGDKRVSALLKSRANNDNyeeVIEHMDLKHLQEREIQHLSGGELQRFAIAAVATQNA---DVYMFDEPSSYLDIK 254
                 3333334444444444444444478899***********************55555555555...9***********984 PP

  == domain 3  score: 10.2 bits;  conditional E-value: 0.0013
      AAA_21   1 lnvliGpNgsGKSnLLd 17 
                 + vl G Ng+GK+++++
  EPX73136.1 378 IVVLLGENGTGKTTFIK 394
                 679************97 PP

  == domain 4  score: 5.8 bits;  conditional E-value: 0.029
      AAA_21 241 tkrllalltallralkkgsllliDEpEngLHP 272
                  ++  a   ++l++  +++++liDEp + L+ 
  EPX73136.1 461 ELQRVA---ICLALGMPADVYLIDEPSAYLDS 489
                 555545...555555555**********9997 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.9   7.7e-06    0.0028      26     202 ..     106     283 ..      90     298 .. 0.68
   2 ?    4.3   0.0     0.066        24      24      42 ..     376     394 ..     370     397 .. 0.83
   3 !   14.7   0.0   4.3e-05     0.015     135     186 ..     423     502 ..     394     527 .. 0.67

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 7.7e-06
                 EEEEEESTTSSHHHHHHHHHHHCTT.TTTTTTCHCCCCCC--BTTCSSTTEEEEEEEEEETTEESSSSSSCEEEEEEEETTSEEEEEETTEEE-HHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  26 ftaivGpNGSGKsnlldAilFvLGersakklrseklsdlihkskekasvkkaeveitfdnedkklkiekeevsisrrvkrkgeseykingkevtkkevs 124
                 +  +vG NG GKs  l  ++  L  +  +     +  +++ +  +++++++   +++ dn ++     +    i r +k++++   ++ ++++++ +++
  EPX73136.1 106 VLGLVGTNGIGKSTALKIMSGKLKPNLGRYDNPPDWAEIVRY-FRGSELQNFFTKVIEDNIKAL-IKPQYVDHIPRAIKTGDKRVSALLKSRANNDNYE 202
                 556788888888887777766666555555556677778887.555666666666653444443.4444445677777777776666766667766666 PP

                 HHHHCTT-STT......CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTT.SEEEEE-SSHHHC CS
                 xxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxx RF
       SMC_N 125 ellesagiske......lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkekskn.aQfivislreeml 202
                 e++e+++++         LSgGe +  a+a +    + + a +y++De  + LD k++ k  +++++   +   +iv+ ++  +l
  EPX73136.1 203 EVIEHMDLKHLqereiqHLSGGELQRFAIAAV----ATQNADVYMFDEPSSYLDIKQRLKAGRVIRSLLGTtNYVIVVEHDLSVL 283
                 666666665433334449******99998877....5566779***********************8654426677777766655 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.066
                 SSEEEEEESTTSSHHHHHH CS
                 xxxxxxxxxxxxxxxxxxx RF
       SMC_N  24 ksftaivGpNGSGKsnlld 42 
                  ++ +++G+NG GK+ ++ 
  EPX73136.1 376 AEIVVLLGENGTGKTTFIK 394
                 567899*********9875 PP

  == domain 3  score: 14.7 bits;  conditional E-value: 4.3e-05
                 T................................CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHH CS
                 x................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 135 e................................lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkek 186
                                                  +LSgGe + va+ L +      pa +yl+De  a LD +++ + ++++k+ 
  EPX73136.1 423 FfkkirsaflnakfqtevcrplnidsiidqevlNLSGGELQRVAICLALG----MPADVYLIDEPSAYLDSEQRIIASKVIKRF 502
                 0444444455555555566666666667777779*****77766666544....4999****************9999999853 PP

>> Fer4  4Fe-4S binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1       2.6   9.5e+02       2       8 ..      11      17 ..      10      18 .. 0.88
   2 ?   -1.2   0.5       5.7   2.1e+03      13      20 ..      25      32 ..      24      33 .. 0.87
   3 !   33.2   3.6   7.9e-11   2.8e-08       2      23 ..      50      71 ..      49      72 .. 0.94

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 2.6
                EEETTTS CS
        Fer4  2 videekC 8 
                +++e+kC
  EPX73136.1 11 IVNEDKC 17
                79***** PP

  == domain 2  score: -1.2 bits;  conditional E-value: 5.7
                HHHHHSTT CS
        Fer4 13 aCvevCPv 20
                +C   CPv
  EPX73136.1 25 ECRRSCPV 32
                5999***8 PP

  == domain 3  score: 33.2 bits;  conditional E-value: 7.9e-11
                EEETTTSSS-THHHHHSTTTEE CS
        Fer4  2 videekCigCGaCvevCPvgAI 23
                +i e +CigCG+Cv+ CP+gAI
  EPX73136.1 50 YISETLCIGCGICVKKCPFGAI 71
                899******************9 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   0.0   0.00024     0.085      28      98 ..     109     208 ..     104     256 .. 0.63
   2 !   12.3   0.1   0.00028       0.1      24      80 ..     377     447 ..     364     509 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00024
      AAA_15  28 liGkNnsGKSsilealdlFlnnkekkn....................kkvikiekedleifeniseskdikIdvef...................aek. 86 
                 l+G+N++GKS++l+++    + k k n                    +        +   ++ i+ +++  I+ ++                   ++  
  EPX73136.1 109 LVGTNGIGKSTALKIM----SGKLKPNlgrydnppdwaeivryfrgsE-------LQNFFTKVIEDNIKALIKPQYvdhipraiktgdkrvsallKSRa 196
                 8**************9....4443334555556888887654333320.......22223344666777777777766666655555554444442223 PP

      AAA_15  87 ekakeyektlks 98 
                 ++++++e+++++
  EPX73136.1 197 NNDNYEEVIEHM 208
                 344444444444 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 0.00028
      AAA_15  24 eltvliGkNnsGKSsilealdlFlnnkekkn..............kkvikiekedleifeniseskdikId 80 
                 e+ vl G+N++GK+++++ + +  + k + +               +++ki + +l+ + +++ ++++ Id
  EPX73136.1 377 EIVVLLGENGTGKTTFIKYMAKTSELKVSMKpqtiapkfqgtvrqLFFKKIRSAFLNAKFQTEVCRPLNID 447
                 389*************9999555555533337778887788888755667777777776666666666665 PP

>> Fer4_6  4Fe-4S binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   2.8       0.3   1.1e+02       2      20 ..      10      31 ..       9      36 .. 0.85
   2 !   25.0   2.3   3.8e-08   1.3e-05       2      24 .]      49      71 ..      48      71 .. 0.93

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.3
      Fer4_6  2 veidpdkCi..gCgd.CvrvCP 20
                + +++dkC    C+  C r CP
  EPX73136.1 10 AIVNEDKCRpkKCRQeCRRSCP 31
                679*****9788*888999999 PP

  == domain 2  score: 25.0 bits;  conditional E-value: 3.8e-08
      Fer4_6  2 veidpdkCigCgdCvrvCPegai 24
                + i + +CigCg Cv+ CP+gai
  EPX73136.1 49 AYISETLCIGCGICVKKCPFGAI 71
                678999****************8 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.0      0.01       3.6      16      51 ..      95     131 ..      88     258 .. 0.75
   2 !   14.0   0.0   0.00014     0.049      24      84 ..     376     430 ..     364     515 .. 0.63

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.01
      AAA_16  16 lervrsgrp.elvllsGesGvGKsslvrellralekd 51 
                 l+r+ ++rp +++ l+G  G+GKs+ ++     l+ +
  EPX73136.1  95 LHRLPTPRPgQVLGLVGTNGIGKSTALKIMSGKLKPN 131
                 78899999989999***********997666666655 PP

  == domain 2  score: 14.0 bits;  conditional E-value: 0.00014
      AAA_16  24 pelvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipysalaqalareellrq 84 
                  e+v+l Ge G+GK++ ++  ++  e +    ++ k +    a  ++  +++l+++++  +
  EPX73136.1 376 AEIVVLLGENGTGKTTFIKYMAKTSELK----VSMKPQTI--APKFQGTVRQLFFKKIRSA 430
                 39****************9999977777....55555555..3223333333323233333 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.0     0.021       7.5       3      51 ..     109     170 ..     107     207 .. 0.75
   2 !   14.7   0.0   8.9e-05     0.032       1      54 [.     379     435 ..     379     456 .. 0.66

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.021
                 EESSTTSSHHHHHHHHHHHHTHE.............EEEEETTTCSSSSTTHHHHHHHHHHH CS
         AAA   3 lyGppGtGKTllakavakelgve.............fleisgsellskyvgesekkirelfk 51 
                 l+G+ G+GK+++ k +  +l+ +             +  + gsel + + +  e++i++l+k
  EPX73136.1 109 LVGTNGIGKSTALKIMSGKLKPNlgrydnppdwaeiVRYFRGSELQNFFTKVIEDNIKALIK 170
                 89*****************9755344445555555545566666666666666666666654 PP

  == domain 2  score: 14.7 bits;  conditional E-value: 8.9e-05
                 EEEESSTTSSHHHHHHHHHHHHTHE..E.EEEETTTCSSSSTTHHHHHHHHHHHHHH CS
         AAA   1 vllyGppGtGKTllakavakelgve..f.leisgsellskyvgesekkirelfkeak 54 
                 v+l G  GtGKT+++k +ak+++ +  +  ++ ++++   + +   kkir  f +ak
  EPX73136.1 379 VVLLGENGTGKTTFIKYMAKTSELKvsMkPQTIAPKFQGTVRQLFFKKIRSAFLNAK 435
                 6899****************9654300222333344444444445556666665555 PP

>> Fer4_10  4Fe-4S dicluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   3.8     0.029        10       2      21 ..      10      32 ..       9      47 .. 0.81
   2 !   19.3   0.1   2.5e-06   0.00088       3      23 ..      50      70 ..      48      95 .. 0.74

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.029
     Fer4_10  2 vvidddtC..irCg.kCvkaCPa 21
                +++++d+C   +C+ +C+++CP+
  EPX73136.1 10 AIVNEDKCrpKKCRqECRRSCPV 32
                57899***6669*99*******9 PP

  == domain 2  score: 19.3 bits;  conditional E-value: 2.5e-06
     Fer4_10  3 vidddtCirCgkCvkaCPadl 23
                +i +  Ci+Cg Cvk CP+ +
  EPX73136.1 50 YISETLCIGCGICVKKCPFGA 70
                788899************955 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.0   0.00017      0.06      43      81 ..     102     140 ..      89     167 .. 0.86
   2 ?    7.2   0.0     0.012       4.3      46      75 ..     377     406 ..     371     440 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 0.00017
       Rad17  43 rkkriLLisGPsGCgkstvvkvLskelgiklrewlnpvs 81 
                 r+ ++L + G  G gkst++k++s +l ++l  + np  
  EPX73136.1 102 RPGQVLGLVGTNGIGKSTALKIMSGKLKPNLGRYDNPPD 140
                 56789**************************99999965 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.012
       Rad17  46 riLLisGPsGCgkstvvkvLskelgiklre 75 
                 +i+++ G  G gk+t +k ++k    k+  
  EPX73136.1 377 EIVVLLGENGTGKTTFIKYMAKTSELKVSM 406
                 588999****************98877754 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.0   0.0    0.0068       2.4      86     124 ..      91     129 ..      72     137 .. 0.75
   2 !   11.5   0.0   0.00058      0.21      99     128 ..     376     405 ..     339     412 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0068
                  THTTHHHHHHHCTTSEEEEECSTTSSHHHHHHHHCTT-- CS
  RsgA_GTPase  86 tkegleelkellkdktsvlvGqSGvGKStLinallpele 124
                  ++ +l++l +   +++  lvG  G+GKSt ++ + ++l+
   EPX73136.1  91 NTFKLHRLPTPRPGQVLGLVGTNGIGKSTALKIMSGKLK 129
                  555566666666789999***********9999988765 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 0.00058
                  TSEEEEECSTTSSHHHHHHHHCTT-----S CS
  RsgA_GTPase  99 dktsvlvGqSGvGKStLinallpelelktg 128
                   +++vl+G+ G GK+t+i+ ++ + elk++
   EPX73136.1 376 AEIVVLLGENGTGKTTFIKYMAKTSELKVS 405
                  489******************999988875 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.2     0.095        34       6      29 ..     105     128 ..     102     246 .. 0.87
   2 !   14.8   0.0   7.2e-05     0.026       4      65 ..     375     432 ..     373     502 .. 0.72

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.095
      AAA_22   6 gilvvtGesGtGKTtllrrlleql 29 
                 ++l ++G  G+GK+t l+ +  +l
  EPX73136.1 105 QVLGLVGTNGIGKSTALKIMSGKL 128
                 566799**********99776665 PP

  == domain 2  score: 14.8 bits;  conditional E-value: 7.2e-05
      AAA_22   4 tagilvvtGesGtGKTtllrrlleqldeeakaee.erpevvfvtlpsstsskdl.lrellralg 65 
                 +a i+v+ Ge GtGKTt ++ ++++ +        ++p+++   ++ +++ ++l ++++ +a+ 
  EPX73136.1 375 DAEIVVLLGENGTGKTTFIKYMAKTSELK----VsMKPQTI--APKFQGTVRQLfFKKIRSAFL 432
                 57899******************997421....12333333..333333444443666666555 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.0    0.0019      0.67      11      39 ..      92     121 ..      88     132 .. 0.86
   2 !    9.0   0.1    0.0032       1.2      22      39 ..     376     393 ..     371     397 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.0019
      AAA_29  11 tfdghtieidlkg.atlltGpsGsGKSTll 39 
                 tf+ h+++  + g +  l+G++G GKST l
  EPX73136.1  92 TFKLHRLPTPRPGqVLGLVGTNGIGKSTAL 121
                 78888888888887888***********86 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0032
      AAA_29  22 kgatlltGpsGsGKSTll 39 
                 +++++l G++G+GK+T++
  EPX73136.1 376 AEIVVLLGENGTGKTTFI 393
                 457899**********98 PP

>> Fer4_21  4Fe-4S dicluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5  11.2   1.1e-06    0.0004       1      58 [.      10      72 ..      10      73 .. 0.79

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 1.1e-06
     Fer4_21  1 AridedkCi..gC.gkCliaCe..dtshqaieidaktvlkvv.edeCvGCnlCssvCPvedcie 58
                A+++edkC   +C ++C  +C+   t+  +ie++++++++++ e  C+GC +C++ CP  ++i+
  EPX73136.1 10 AIVNEDKCRpkKCrQECRRSCPvvRTGKLCIEVAPNSRIAYIsETLCIGCGICVKKCPF-GAIN 72
                78899999533783468899984347899******99998874779************7.8886 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0      0.83     3e+02      18      42 ..      96     127 ..      80     138 .. 0.72
   2 ?   -0.8   0.1       3.9   1.4e+03      65      87 ..     203     225 ..     194     257 .. 0.71
   3 !   14.4   0.1   7.7e-05     0.028      19      46 ..     376     403 ..     357     418 .. 0.80

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.83
                 H.......TEEEEEEESTTSSHHHHHHHHHHH CS
        TsaE  18 l.......gdvilLeGdLGaGKTtlvrglaka 42 
                         g+v+ L G  G GK+t  + +  +
  EPX73136.1  96 HrlptprpGQVLGLVGTNGIGKSTALKIMSGK 127
                 2345666678999**********998877655 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 3.9
                 S.EEEEE-TT-SSTHHHHHCTTCC CS
        TsaE  65 g.lyHfDlYRledeeeleelglee 87 
                 + + H+Dl  l+ e+e+++l   e
  EPX73136.1 203 EvIEHMDLKHLQ-EREIQHLSGGE 225
                 248999999995.66666665555 PP

  == domain 3  score: 14.4 bits;  conditional E-value: 7.7e-05
                 TEEEEEEESTTSSHHHHHHHHHHHTT-- CS
        TsaE  19 gdvilLeGdLGaGKTtlvrglakalgve 46 
                 +++++L G+ G+GKTt+++ +ak+ +++
  EPX73136.1 376 AEIVVLLGENGTGKTTFIKYMAKTSELK 403
                 4679******************987665 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.0   0.00089      0.32      21      82 ..     105     167 ..      94     198 .. 0.79
   2 ?   -3.1   0.0       9.8   3.5e+03      68     108 ..     226     275 ..     219     277 .. 0.60
   3 ?    5.1   0.1      0.03        11      20      45 ..     376     400 ..     371     406 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00089
                 EEEEEEESTTSSHHHHHHHHCCSHCCCCCCBT.EEEEEEEESXXHHHHHHHXXHHHHHCCCTT CS
      NB-ARC  21 lvvalvGmgGvGKttlakqilnksdevegrFd.svawvvvsktdkseeiletilkeLslsedd 82 
                  v++lvG  G+GK+t +k +  k++   gr+d    w  + + +  +e++++  k+++++ + 
  EPX73136.1 105 QVLGLVGTNGIGKSTALKIMSGKLKPNLGRYDnPPDWAEIVRYFRGSELQNFFTKVIEDNIKA 167
                 599*************9999999999999***6678999999999999999998888665444 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 9.8
                 HHHXXHHHHHCCCTTSSSS-STTS.........HHHHHHHHCCCTTEEEE CS
      NB-ARC  68 iletilkeLslseddleekeeves.........lkrklvrlLltkrfllv 108
                 ++++ ++ + ++++d   ++e  s         + r ++ lL t ++++v
  EPX73136.1 226 LQRFAIAAVATQNADVYMFDEPSSyldikqrlkAGRVIRSLLGTTNYVIV 275
                 55555666666666666666655555555554355566666667788887 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.03
                 SEEEEEEESTTSSHHHHHHHHCCSHC CS
      NB-ARC  20 slvvalvGmgGvGKttlakqilnksd 45 
                   +v l G  G GKtt +k + +  +
  EPX73136.1 376 AEIVVLLGENGTGKTTFIKYMAKT-S 400
                 3499*************9988777.4 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.087        31       3      23 ..     109     129 ..     107     156 .. 0.84
   2 !   11.4   0.0   0.00089      0.32       1      26 [.     379     404 ..     379     422 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.087
  RNA_helicase   3 lyGpsgeGKStlakeLakall 23 
                   l+G +g+GKSt+ k ++ +l 
    EPX73136.1 109 LVGTNGIGKSTALKIMSGKLK 129
                   78***********99877766 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00089
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkkl 26 
                   ++l G++g+GK+t++k++ak+ + k+
    EPX73136.1 379 VVLLGENGTGKTTFIKYMAKTSELKV 404
                   6899*************998766444 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.3     0.039        14       4      22 ..     106     124 ..     104     133 .. 0.82
   2 !   12.5   0.1   0.00026     0.092       5      26 ..     379     399 ..     376     420 .. 0.87

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.039
      AAA_24   4 kiliyGpsgiGKTtlakel 22 
                  + ++G +giGK+t +k +
  EPX73136.1 106 VLGLVGTNGIGKSTALKIM 124
                 57899**********9988 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 0.00026
      AAA_24   5 iliyGpsgiGKTtlakelgpkp 26 
                 +++ G++g+GKTt++k +  k+
  EPX73136.1 379 VVLLGENGTGKTTFIKYM-AKT 399
                 799*************99.544 PP

>> Fer4_7  4Fe-4S dicluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   3.3       2.2     8e+02      33      50 ..      12      32 ..       3      36 .. 0.79
   2 !   10.2  13.9    0.0025      0.89       4      52 .]      21      70 ..      16      70 .. 0.77
   3 !   18.4   1.4     7e-06    0.0025       2      20 ..      56      74 ..      55      92 .. 0.79

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 2.2
      Fer4_7 33 idpekCl..gCga.CvavCPt 50
                ++++kC    C++ C + CP+
  EPX73136.1 12 VNEDKCRpkKCRQeCRRSCPV 32
                56889965589988*****97 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.0025
      Fer4_7  4 gCg.aCvaaCpvkaieldeeenekgtekveidpekClgCgaCvavCPtga 52
                +C+  C + Cpv        e+++  + ++i+++ C+gCg Cv+ CP+ga
  EPX73136.1 21 KCRqECRRSCPVVRTGKLCIEVAPNSRIAYISETLCIGCGICVKKCPFGA 70
                67558999999555554445566667889999****************98 PP

  == domain 3  score: 18.4 bits;  conditional E-value: 7e-06
      Fer4_7  2 CigCgaCvaaCpvkaield 20
                CigCg Cv+ Cp +ai++ 
  EPX73136.1 56 CIGCGICVKKCPFGAINII 74
                ************9999865 PP

>> Fer4_2  4Fe-4S binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   2.8      0.14        51       3      21 ..      10      31 ..       8      32 .. 0.79
   2 !   17.8   1.2   7.2e-06    0.0026       4      21 ..      50      67 ..      47      68 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.14
      Fer4_2  3 vvvdtdrCi.g.Cg.aCvsaCP 21
                + v++d+C    C+  C+ +CP
  EPX73136.1 10 AIVNEDKCRpKkCRqECRRSCP 31
                5789****5336*88******9 PP

  == domain 2  score: 17.8 bits;  conditional E-value: 7.2e-06
      Fer4_2  4 vvdtdrCigCgaCvsaCP 21
                ++ +  CigCg+Cv+ CP
  EPX73136.1 50 YISETLCIGCGICVKKCP 67
                556679************ PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.2      0.16        56       3      22 ..     108     127 ..     106     138 .. 0.84
   2 !   10.9   0.0   0.00099      0.36       2      33 ..     379     411 ..     378     518 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.16
                 EEEESTTSSHHHHHHHHHTS CS
    MMR_HSR1   3 aivGrpNvGKStLinaltge 22 
                 ++vG    GKSt ++ ++g+
  EPX73136.1 108 GLVGTNGIGKSTALKIMSGK 127
                 89************999987 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00099
                 EEEEESTTSSHHHHHHHHHTS.TEEESSSTTSS CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltge.kaivsdkpgtT 33 
                 v+++G   +GK+t+i+ + ++ + +vs kp+t 
  EPX73136.1 379 VVLLGENGTGKTTFIKYMAKTsELKVSMKPQTI 411
                 799****************98678999999874 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0      0.41   1.5e+02       4      24 ..     109     129 ..     107     143 .. 0.84
   2 ?   -1.8   0.0       7.9   2.8e+03     101     106 ..     225     230 ..     188     265 .. 0.58
   3 !   10.9   0.0   0.00095      0.34       2      23 ..     379     400 ..     378     412 .. 0.85

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.41
                 EE--SSSSHHHHHHHGGGGBS CS
       AAA_5   4 LvGppGtgKselaerlaaaln 24 
                 LvG  G+gKs+  + ++  l+
  EPX73136.1 109 LVGTNGIGKSTALKIMSGKLK 129
                 9**********9999988775 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 7.9
                 SEEE-- CS
       AAA_5 101 elvkak 106
                 el++++
  EPX73136.1 225 ELQRFA 230
                 333322 PP

  == domain 3  score: 10.9 bits;  conditional E-value: 0.00095
                 EEEE--SSSSHHHHHHHGGGGB CS
       AAA_5   2 vlLvGppGtgKselaerlaaal 23 
                 v+L+G+ GtgK+++++++a+  
  EPX73136.1 379 VVLLGENGTGKTTFIKYMAKTS 400
                 89***************99865 PP

>> Fer4_9  4Fe-4S dicluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7  11.4   3.5e-05     0.013       4      51 .]      21      71 ..      13      71 .. 0.65

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 3.5e-05
      Fer4_9  4 gCga.CveaCpagvvvedaaerkarlraase...eaCigCgaCveaCpkgai 51
                +C++ C ++Cp   + + + e   + r+a +   + CigCg Cv++Cp gai
  EPX73136.1 21 KCRQeCRRSCPVVRTGKLCIEVAPNSRIA-YiseTLCIGCGICVKKCPFGAI 71
                46534778886655555444444433332.145589************9987 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.1       0.5   1.8e+02      38      58 ..     109     129 ..     100     137 .. 0.84
   2 !   12.9   0.2   0.00016     0.056      35      94 ..     378     431 ..     373     440 .. 0.83

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.5
       AAA_7  38 lvGptGtGKtviikdllkkld 58 
                 lvG+ G GK++ +k +  kl+
  EPX73136.1 109 LVGTNGIGKSTALKIMSGKLK 129
                 8**********9988777776 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 0.00016
       AAA_7  35 pvllvGptGtGKtviikdllkkldkekylsltinfsaqtsanqlqdiiesklekrrkgvy 94 
                  v+l G+ GtGKt+ ik + k+ +      l+++++ qt a ++q ++ + + k+ ++ +
  EPX73136.1 378 IVVLLGENGTGKTTFIKYMAKTSE------LKVSMKPQTIAPKFQGTVRQLFFKKIRSAF 431
                 5899************98777666......889999999999999999988888877666 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.1       0.2        71      19      38 ..     105     124 ..      99     134 .. 0.84
   2 !   10.0   0.0    0.0014      0.51      17      43 ..     375     401 ..     372     489 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.2
      AAA_30  19 rvavltGpAGtGKttalkal 38 
                 +v  l+G  G GK+talk +
  EPX73136.1 105 QVLGLVGTNGIGKSTALKIM 124
                 68889************976 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.0014
      AAA_30  17 gdrvavltGpAGtGKttalkalreawe 43 
                 ++ ++vl G  GtGKtt +k ++++ e
  EPX73136.1 375 DAEIVVLLGENGTGKTTFIKYMAKTSE 401
                 55699***************9988766 PP

>> Fer4_16  4Fe-4S double cluster binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   2.6       4.6   1.7e+03       3      14 ..      20      32 ..      14      51 .. 0.84
   2 !   17.0   0.3   2.4e-05    0.0087       2      18 ..      56      72 ..      55     103 .. 0.73

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 4.6
     Fer4_16  3 gtCgk.CaevCPt 14
                ++C++ C  +CP+
  EPX73136.1 20 KKCRQeCRRSCPV 32
                5788889999997 PP

  == domain 2  score: 17.0 bits;  conditional E-value: 2.4e-05
     Fer4_16  2 CgtCgkCaevCPtnaik 18
                C++Cg C++ CP +ai+
  EPX73136.1 56 CIGCGICVKKCPFGAIN 72
                ***************87 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.4      0.13        47       3      20 ..     107     124 ..     105     134 .. 0.80
   2 ?   10.7   0.0     0.001      0.37       2      22 ..     378     398 ..     377     410 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.13
                 EEEEC-TTTCHHHHHHHH CS
       NACHT   3 vilqGeaGsGKTtLlqkl 20 
                 + l G +G+GK+t l+ +
  EPX73136.1 107 LGLVGTNGIGKSTALKIM 124
                 5689*********99755 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.001
                 CEEEEC-TTTCHHHHHHHHHH CS
       NACHT   2 lvilqGeaGsGKTtLlqklal 22 
                 +v+l Ge+G GKTt+++ +a 
  EPX73136.1 378 IVVLLGENGTGKTTFIKYMAK 398
                 699************997765 PP

>> Fer4_17  4Fe-4S dicluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   2.2       3.4   1.2e+03       5      16 ..      22      34 ..      16      53 .. 0.72
   2 ?   15.8   0.1   4.3e-05     0.015       2      18 ..      56      78 ..      54     101 .. 0.66

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 3.4
     Fer4_17  5 Cgy.ClpeCpsye 16
                C+  C+++Cp  +
  EPX73136.1 22 CRQeCRRSCPVVR 34
                6645777777655 PP

  == domain 2  score: 15.8 bits;  conditional E-value: 4.3e-05
     Fer4_17  2 CiqCgyClpeCpsyea......y 18
                Ci+Cg C+++Cp++++      +
  EPX73136.1 56 CIGCGICVKKCPFGAIniinlpT 78
                99999999999987764444332 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.5      0.09        32       3      24 ..     106     127 ..     104     134 .. 0.79
   2 ?   11.3   0.1   0.00056       0.2       3      28 ..     378     403 ..     376     415 .. 0.83

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.09
                 EEEEEESTTSSHHHHHHHHHHH CS
       SRP54   3 villvGlqGaGKTttlaKLaal 24 
                 v+ lvG++G+GK t+l  ++ +
  EPX73136.1 106 VLGLVGTNGIGKSTALKIMSGK 127
                 5679**********98766655 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 0.00056
                 EEEEEESTTSSHHHHHHHHHHHHHHT CS
       SRP54   3 villvGlqGaGKTttlaKLaallkke 28 
                 +++l+G +G+GKTt +  +a+  + +
  EPX73136.1 378 IVVLLGENGTGKTTFIKYMAKTSELK 403
                 799****************9987766 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   0.00012     0.043      13      37 ..     370     394 ..     354     404 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 0.00012
      ATPase  13 kgGipegrvvlitGepGtGKtifal 37 
                  gG+ ++++v + Ge GtGKt+f +
  EPX73136.1 370 AGGFSDAEIVVLLGENGTGKTTFIK 394
                 5*********************965 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.1      0.09        32       3      25 ..     109     150 ..     107     222 .. 0.51
   2 ?   -0.4   0.0       4.5   1.6e+03      25      79 ..     228     283 ..     210     363 .. 0.57
   3 ?    8.8   0.1    0.0061       2.2       1      25 [.     379     416 ..     379     584 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.09
      AAA_18   3 ltGtpGvGKttlakeLskrl.gf..................g 25 
                 l Gt G GK+t  k  s +l  +                  g
  EPX73136.1 109 LVGTNGIGKSTALKIMSGKLkPNlgrydnppdwaeivryfrG 150
                 89*************998873223444444443333333331 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 4.5
      AAA_18  25 gvnlrdvakenglllevdpealdeskrldedkldklldaleenss.....aleegknlvi 79 
                  + +  va++n  ++++d++    s  ld++++ k+ + ++            e++  v+
  EPX73136.1 228 RFAIAAVATQNADVYMFDEP----SSYLDIKQRLKAGRVIRSLLGttnyvIVVEHDLSVL 283
                 55666677777777777777....555555555555554444433333442233333333 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.0061
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf.............g 25 
                 ++l G  G+GKtt+ k+ +k  ++              
  EPX73136.1 379 VVLLGENGTGKTTFIKYMAKTSELkvsmkpqtiapkfQ 416
                 6899999***********88754455556666666663 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0      0.26        93       4      20 ..     109     125 ..     107     161 .. 0.83
   2 ?    8.5   0.0    0.0063       2.3       2      22 ..     379     399 ..     378     429 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.26
      AAA_28   4 itGgestGKTtlleaLa 20 
                 ++G+ + GK+t l+ ++
  EPX73136.1 109 LVGTNGIGKSTALKIMS 125
                 68**********99876 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0063
      AAA_28   2 ivitGgestGKTtlleaLaar 22 
                 +v++G  +tGKTt ++ +a++
  EPX73136.1 379 VVLLGENGTGKTTFIKYMAKT 399
                 89**************99976 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0      0.36   1.3e+02       3      23 ..     105     125 ..     103     166 .. 0.86
   2 ?    0.4   0.0       1.8   6.4e+02      29      84 ..     201     258 ..     188     276 .. 0.71
   3 ?    7.2   0.0     0.014         5       3      27 ..     377     401 ..     375     451 .. 0.81

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.36
      AAA_14   3 kilvitGaRrvGKTtllkqli 23 
                 ++l ++G   +GK+t lk + 
  EPX73136.1 105 QVLGLVGTNGIGKSTALKIMS 125
                 68899***********97654 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 1.8
      AAA_14  29 kkesilyinldderdkkladpe..kllelileklkeekktylflDEiqevpewekalk 84 
                  +e i  ++l++ +++++++ +  +l ++  + + +++  + ++DE + + ++++ lk
  EPX73136.1 201 YEEVIEHMDLKHLQEREIQHLSggELQRFAIAAVATQNADVYMFDEPSSYLDIKQRLK 258
                 35666677888888888776656677777777755568999999*9999877776666 PP

  == domain 3  score: 7.2 bits;  conditional E-value: 0.014
      AAA_14   3 kilvitGaRrvGKTtllkqlikell 27 
                 +i+v+ G   +GKTt++k ++k++ 
  EPX73136.1 377 EIVVLLGENGTGKTTFIKYMAKTSE 401
                 799*****************99876 PP

>> SbcCD_C  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0     0.034        12      25      54 ..     213     242 ..     191     254 .. 0.76
   2 ?    5.8   0.0     0.046        17      12      50 ..     436     473 ..     433     491 .. 0.78

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.034
     SbcCD_C  25 elsrssgtlSGGekqflaylalaaalaaly 54 
                   +r+++ lSGGe q +a  a+a   a++y
  EPX73136.1 213 LQEREIQHLSGGELQRFAIAAVATQNADVY 242
                 47899*********9999888887666555 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.046
     SbcCD_C  12 fevevrdedgkekelsrssgtlSGGekqflaylalaaal 50 
                 f+ ev ++ + ++ +++++ +lSGGe    ++++la+++
  EPX73136.1 436 FQTEVCRPLNIDSIIDQEVLNLSGGEL-QRVAICLALGM 473
                 55555555555666889999*******.77889999987 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.2      0.13        47       4      24 ..     109     129 ..     106     247 .. 0.88
   2 ?    8.2   0.0    0.0073       2.6       2      22 ..     379     399 ..     378     442 .. 0.90

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.13
      AAA_33   4 lvGlpGsGKstlaerllkklg 24 
                 lvG +G GKst ++ +  kl+
  EPX73136.1 109 LVGTNGIGKSTALKIMSGKLK 129
                 89*********9987766665 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.0073
      AAA_33   2 vllvGlpGsGKstlaerllkk 22 
                 v+l G +G+GK+t+++ ++k 
  EPX73136.1 379 VVLLGENGTGKTTFIKYMAKT 399
                 8999***********988865 PP

>> VirE  Virulence-associated protein E
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.0      0.01       3.6      52      75 ..     104     127 ..      82     180 .. 0.78
   2 ?    4.0   0.0     0.097        35      53      74 ..     377     398 ..     372     410 .. 0.89

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.01
        VirE  52 DfvlvLvGkqgsgKstfleklgee 75 
                  +vl LvG  g+gKst l++++++
  EPX73136.1 104 GQVLGLVGTNGIGKSTALKIMSGK 127
                 57999****************876 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.097
        VirE  53 fvlvLvGkqgsgKstfleklge 74 
                 +++vL G+ g+gK+tf++ +++
  EPX73136.1 377 EIVVLLGENGTGKTTFIKYMAK 398
                 689**************99965 PP

>> dNK  Deoxynucleoside kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0      0.54   1.9e+02       5      23 ..     111     129 ..     107     162 .. 0.75
   2 ?    9.4   0.0    0.0024      0.87       4      61 ..     382     441 ..     379     449 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.54
                 ESTTSSHHHHHHHHHCCST CS
         dNK   5 GnIgaGKstlvklLskklg 23 
                 G+ g GKst +k++s kl+
  EPX73136.1 111 GTNGIGKSTALKIMSGKLK 129
                 77799*********99886 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.0024
                 EESTTSSHHHHHHHHHCCSTCEEEE-HHHHCCSSSSHHHHHHHHSHHH..HHHHHHHHHH CS
         dNK   4 eGnIgaGKstlvklLskklgvkvfeEpvdkwtnvqknlLekfYkdpsr..wsfalqtyvl 61 
                  G  g GK+t++k ++k+ + kv   p     + q+++ ++f+k++    + +++qt+v+
  EPX73136.1 382 LGENGTGKTTFIKYMAKTSELKVSMKPQTIAPKFQGTVRQLFFKKIRSafLNAKFQTEVC 441
                 58889***************9999988777777788999999999887667888888887 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0     0.094        34      27     105 ..     108     208 ..      82     321 .. 0.67
   2 ?    7.4   0.0    0.0057       2.1      26      73 ..     379     429 ..     373     535 .. 0.79

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.094
                 EEEESTTSSHHHHHHHHHHHCS--................--HHHHHC.CHHHHHHHHHHHHH.....HHHHHHHHTT.......HHHC-SS-SCCCS- CS
     G-alpha  27 lllGqseSGKsTilkqlkllykkg................fseeelat.wraviqlnivrsik.....tilealesleselsesfelqelkerldplkk 103
                  l+G+++ GKsT lk +    k++                f+ +el++ +++vi  ni   ik     +i +a+++ +++ s+ +++++++++++++ +
  EPX73136.1 108 GLVGTNGIGKSTALKIMSGKLKPNlgrydnppdwaeivryFRGSELQNfFTKVIEDNIKALIKpqyvdHIPRAIKTGDKRVSALLKSRANNDNYEEVIE 206
                 5899***********999555555577777777777777777777766677766666654333211113333333333444334455555555544443 PP

                 HC CS
     G-alpha 104 ve 105
                   
  EPX73136.1 207 HM 208
                 33 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0057
                 EEEEESTTSSHHHHHHHHHHHCS--..--HHHHHC.CHHHHHHHHHHHHHH CS
     G-alpha  26 llllGqseSGKsTilkqlkllykkg..fseeelat.wraviqlnivrsikt 73 
                 ++llG+++ GK+T++k + +  + +  ++ + +a  ++  +++ + ++i++
  EPX73136.1 379 VVLLGENGTGKTTFIKYMAKTSELKvsMKPQTIAPkFQGTVRQLFFKKIRS 429
                 689**************9977744433555555444666666666665555 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0      0.15        54      58      77 ..     109     128 ..      85     132 .. 0.83
   2 ?    6.7   0.1    0.0097       3.5      53      76 ..     376     399 ..     367     407 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.15
      DUF815  58 LwGarGtGKSslvkallney 77 
                 L+G+ G GKS+ +k +  ++
  EPX73136.1 109 LVGTNGIGKSTALKIMSGKL 128
                 99***********9887665 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0097
      DUF815  53 annvLLwGarGtGKSslvkallne 76 
                 a+ v+L G+ GtGK + +k + ++
  EPX73136.1 376 AEIVVLLGENGTGKTTFIKYMAKT 399
                 77899**************98875 PP

>> Rad51  Rad51
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0    0.0007      0.25      29      68 ..     368     407 ..     332     430 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.0007
                 HHTSSEESSSEEEEEESTTSSHHHHHHHHHHHTTS-TTTS CS
       Rad51  29 lLgGGietgsiteifGefrsGktqlchtlcvtvqlplelg 68 
                 +  GG+    i  ++Ge+++Gkt + + ++ t  l ++++
  EPX73136.1 368 IGAGGFSDAEIVVLLGENGTGKTTFIKYMAKTSELKVSMK 407
                 568******************************9999986 PP

>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0       1.3   4.6e+02       9      24 ..     109     124 ..     106     143 .. 0.83
   2 ?    8.8   0.0    0.0024      0.88       7      33 ..     379     405 ..     375     437 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 1.3
                 EEEBTTSSCCCCCCTT CS
      Septin   9 vvGesglGkttlintl 24 
                 +vG++g+Gk+t ++ +
  EPX73136.1 109 LVGTNGIGKSTALKIM 124
                 79*********98865 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.0024
                 EEEEEBTTSSCCCCCCTTSSSS----- CS
      Septin   7 lmvvGesglGkttlintlfetdlieee 33 
                 +++ Ge+g+Gktt+i+ + +t+  + +
  EPX73136.1 379 VVLLGENGTGKTTFIKYMAKTSELKVS 405
                 5678**************999877664 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.2       2.7   9.6e+02      10      31 ..     104     125 ..     101     135 .. 0.82
   2 ?   10.4   0.0    0.0018      0.63      10      45 ..     376     411 ..     370     416 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 2.7
      AAA_19  10 ekvllvtaGpGtGKTrvlkhiv 31 
                  +vl +++  G GK++ lk + 
  EPX73136.1 104 GQVLGLVGTNGIGKSTALKIMS 125
                 578899**********998765 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.0018
      AAA_19  10 ekvllvtaGpGtGKTrvlkhivallvelggvkpeei 45 
                 ++++++++  GtGKT+ +k + +  +   ++kp++i
  EPX73136.1 376 AEIVVLLGENGTGKTTFIKYMAKTSELKVSMKPQTI 411
                 6889***************99988877777776655 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   2.7      0.65   2.3e+02      24      38 ..     109     123 ..     102     258 .. 0.84
   2 ?   12.4   0.2   0.00045      0.16      18      37 ..     375     394 ..     359     397 .. 0.82

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.65
      AAA_23  24 ItGpNGaGKTTildA 38 
                 ++G NG GK+T l  
  EPX73136.1 109 LVGTNGIGKSTALKI 123
                 79*********9865 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 0.00045
      AAA_23  18 skgltlItGpNGaGKTTild 37 
                 +  ++++ G+NG+GKTT++ 
  EPX73136.1 375 DAEIVVLLGENGTGKTTFIK 394
                 55799************985 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.2       2.8     1e+03       4      17 ..     109     122 ..     107     131 .. 0.79
   2 ?    9.9   0.1    0.0023      0.83       2      23 ..     379     400 ..     378     431 .. 0.76

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 2.8
                 EESSTTSSHHHHHH CS
         Roc   4 lvGdsgvGKtsllk 17 
                 lvG +g+GK++ lk
  EPX73136.1 109 LVGTNGIGKSTALK 122
                 8*********9775 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.0023
                 EEEESSTTSSHHHHHHCHCT-C CS
         Roc   2 vvlvGdsgvGKtsllkrfvedk 23 
                 vvl+G++g+GKt+++k + + +
  EPX73136.1 379 VVLLGENGTGKTTFIKYMAKTS 400
                 79*************8776543 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0       3.2   1.2e+03     114     145 ..     210     241 ..     204     259 .. 0.85
   2 ?    9.1   0.0    0.0027      0.95      25      49 ..     379     403 ..     370     439 .. 0.76

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 3.2
                      HHHHHHSEEESBTSSSEEE--EEEEEEESS-H CS
  Sigma54_activat 114 lrvlqegevervGsskeikvdvriiaatnedl 145
                      l+ lqe+e++++ + + +++ +  +a+ n d+
       EPX73136.1 210 LKHLQEREIQHLSGGELQRFAIAAVATQNADV 241
                      7899********99999999999999988886 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0027
                      EEEECSTTSSHHHHHHHHHHHSTTT CS
  Sigma54_activat  25 vlitGesGtGKellaraiheaskrk 49 
                      v+++Ge+GtGK+++ + + ++s+ k
       EPX73136.1 379 VVLLGENGTGKTTFIKYMAKTSELK 403
                      7889**************9988754 PP

>> Fer4_4  4Fe-4S binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   4.2      0.17        62       2      16 ..      15      32 ..      14      36 .. 0.83
   2 ?   12.3   2.8   0.00054      0.19       4      17 .]      56      69 ..      52      69 .. 0.90

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.17
      Fer4_4  2 erCi..gCgs.CvaaCPq 16
                ++C    C++ C+++CP+
  EPX73136.1 15 DKCRpkKCRQeCRRSCPV 32
                6786669**88******4 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 0.00054
      Fer4_4  4 CigCgsCvaaCPqg 17
                CigCg Cv  CP+g
  EPX73136.1 56 CIGCGICVKKCPFG 69
                ************86 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.2      0.26        93       4      24 ..     109     129 ..     106     134 .. 0.85
   2 ?    5.6   0.2     0.037        13       2      22 ..     379     399 ..     378     410 .. 0.83

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.26
                 EE--TTSSHHHHHHHHHHHH. CS
    NTPase_1   4 iTGppGvGKtTlvkkvlellk 24 
                 + G  G+GK+T +k ++ +lk
  EPX73136.1 109 LVGTNGIGKSTALKIMSGKLK 129
                 7899*********99988886 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.037
                 EEEE--TTSSHHHHHHHHHHH CS
    NTPase_1   2 vfiTGppGvGKtTlvkkvlel 22 
                 v++ G+ G+GKtT++k ++++
  EPX73136.1 379 VVLLGENGTGKTTFIKYMAKT 399
                 6788***********987764 PP

>> Fer4_8  4Fe-4S dicluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6  10.7     0.059        21       9      64 ..      24      69 ..      16      70 .. 0.81
   2 ?   11.8   1.3   0.00071      0.26       5      18 ..      56      69 ..      52     102 .. 0.78

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.059
      Fer4_8  9 gaCqsaCpvlrrtkkhlldargeaaedvqeeqvleeeealwsCttcgaCtevCpvg 64
                + C+ +Cpv+r+ k  +  a++ +++   +e           C +cg C+++Cp g
  EPX73136.1 24 QECRRSCPVVRTGKLCIEVAPNSRIA-YISE---------TLCIGCGICVKKCPFG 69
                47999999999999999999999999.4444.........369**********975 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 0.00071
      Fer4_8  5 CieCgaCqsaCpvl 18
                Ci+Cg C ++Cp+ 
  EPX73136.1 56 CIGCGICVKKCPFG 69
                9**********953 PP

>> Fer4_3  4Fe-4S binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   3.2       1.4     5e+02       4      13 ..      22      32 ..      15      34 .. 0.77
   2 ?   13.3   4.5   0.00035      0.13       1      15 []      56      70 ..      56      70 .. 0.98

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 1.4
      Fer4_3  4 Cg.aCvevCPv 13
                C+  C ++CPv
  EPX73136.1 22 CRqECRRSCPV 32
                7546******6 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 0.00035
      Fer4_3  1 CtgCgaCvevCPvgA 15
                C+gCg Cv+ CP gA
  EPX73136.1 56 CIGCGICVKKCPFGA 70
                *************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (594 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       637  (0.035529); expected 358.6 (0.02)
Passed bias filter:                      538  (0.0300073); expected 358.6 (0.02)
Passed Vit filter:                       118  (0.00658152); expected 17.9 (0.001)
Passed Fwd filter:                        50  (0.00278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              50  [number of targets reported over threshold]
# CPU time: 0.70u 0.26s 00:00:00.96 Elapsed: 00:00:00.41
# Mc/sec: 4381.47
//
Query:       EPX73137.1  [L=382]
Description: S-adenosylmethionine synthetase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.7e-66  220.5   0.0    1.3e-65  219.6   0.0    1.5  1  S-AdoMet_synt_C  S-adenosylmethionine synthetase, C-terminal 
    6.8e-45  151.8   0.2    1.5e-44  150.7   0.2    1.6  1  S-AdoMet_synt_N  S-adenosylmethionine synthetase, N-terminal 
    2.9e-44  150.2   0.0    6.1e-44  149.1   0.0    1.6  1  S-AdoMet_synt_M  S-adenosylmethionine synthetase, central dom
  ------ inclusion threshold ------
      0.018   13.9   0.3      0.095   11.5   0.1    2.0  2  AdoMet_Synthase  S-adenosylmethionine synthetase (AdoMet synt


Domain annotation for each model (and alignments):
>> S-AdoMet_synt_C  S-adenosylmethionine synthetase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  219.6   0.0   2.8e-69   1.3e-65       1     138 []     239     376 ..     239     376 .. 0.99

  Alignments for each domain:
  == domain 1  score: 219.6 bits;  conditional E-value: 2.8e-69
                      S-TTTTS-EETTS-TTTTTTTTSS---S---TTB-TTSHHHHHHHHHHHHHHHHHHTTSBSEEEEEEEE-TT-SS-SEEEEEE-S-BSS-HHHH CS
  S-AdoMet_synt_C   1 iGgpkgdaGltgrkiivdtYgglaahgggafsgKdptkvDrsaayaaryvaknlvaaglakkvevqlsYaigvaepvsisvetfgtekvseeei 94 
                      +Ggp+gdaGltgrkiivdtYgg++ahgggafsgKd++kvDrsaayaar++ak+lvaagla++++vqlsYaigvaep+si+v+t++t++ +++e+
       EPX73137.1 239 VGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYSKVDRSAAYAARWIAKSLVAAGLARRCLVQLSYAIGVAEPLSIFVNTYETSSKTSAEL 332
                      7********************************************************************************************* PP

                      HHHHHHH----HHHHHHHHTTTSS--TGGGSS-SSS--T-TTS. CS
  S-AdoMet_synt_C  95 aeivkevfdlrpaaiieeldLkkpiykktaayghfgreelpwek 138
                      +ei++++fdlrp+ ++++l+L++p+y +ta+yghf++++ pwe+
       EPX73137.1 333 VEIIRKNFDLRPGVLVKSLRLQTPFYLSTASYGHFTDQSKPWEQ 376
                      ******************************************97 PP

>> S-AdoMet_synt_N  S-adenosylmethionine synthetase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.7   0.2   3.3e-48   1.5e-44       2      99 .]       5     102 ..       4     102 .. 0.99

  Alignments for each domain:
  == domain 1  score: 150.7 bits;  conditional E-value: 3.3e-48
  S-AdoMet_synt_N   2 ylftsesVseGHPDkvadqisdaildailkedpkarvacetlvttglvvvageittkakvdiekivrevikeigYekeelgfdaktcevlvale 95 
                      +lftsesV eGHPDk++dqisdailda+lk+dp ++vacet+++tg+++v+geitt+++vd++ki+r++ik igY+++e+gfd ktc+vlva+e
       EPX73137.1   5 FLFTSESVGEGHPDKICDQISDAILDACLKDDPLSKVACETAAKTGMIMVFGEITTRSQVDYQKIIRNTIKTIGYDSSEKGFDHKTCNVLVAIE 98 
                      89******************************************************************************************** PP

  S-AdoMet_synt_N  96 eqsp 99 
                      +qsp
       EPX73137.1  99 QQSP 102
                      ***7 PP

>> S-AdoMet_synt_M  S-adenosylmethionine synthetase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.1   0.0   1.4e-47   6.1e-44       2     120 .]     117     237 ..     116     237 .. 0.96

  Alignments for each domain:
  == domain 1  score: 149.1 bits;  conditional E-value: 1.4e-47
  S-AdoMet_synt_M   2 igAgDqGimfGYAtdeteelmPlpillahklaerlaelrkegeleylrpDaKsqvtveYee...elkpvrvdtvvistqhdeevsqeklredlk 92 
                      +gAgDqGimfGYA+det+el+Pl+illah+l   ++++r++g+l++lrpD+K+qvt+eYee   +  p+rvdt+v+s+qh+e++s+e+lr+++ 
       EPX73137.1 117 LGAGDQGIMFGYASDETPELLPLTILLAHRLNAAMSKARRDGTLPWLRPDTKTQVTIEYEEnkgAVIPKRVDTIVVSAQHAEDISTEDLRSEIL 210
                      7**********************************************************76677889*************************** PP

  S-AdoMet_synt_M  93 ekvikkvlkeelldekktkllinptGkF 120
                      +k++k++++++lld+ +t ++i+p+G+F
       EPX73137.1 211 NKIVKTTVPNHLLDA-QTVYHIQPSGRF 237
                      ********9999887.5**********9 PP

>> AdoMet_Synthase  S-adenosylmethionine synthetase (AdoMet synthetase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   2.1e-05     0.095      22      41 ..      10      29 ..       6      42 .. 0.87
   2 ?    0.0   0.0     0.064   2.8e+02      92     171 ..      59     136 ..      45     222 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 2.1e-05
                     EEE-TTSHHHHHHHHHHHHH CS
  AdoMet_Synthase 22 ErKGiGHPDsiaDgiaeavs 41
                     E  G GHPD+i+D+i++a+ 
       EPX73137.1 10 ESVGEGHPDKICDQISDAIL 29
                     66799************986 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.064
                      EEEE.EEE--HHHHHHHHHHHHHHHH-SS--TTTSEEEEEEEEEEEEHHHHHHCH-SS...-BESSSEEEEEEES--HHHH CS
  AdoMet_Synthase  92 tkevegekipveeialeaakeylkenlraldlekdvivdvklgkgsadLkdvferkkk.evplaNDtSfgvgyaplselek 171
                      t+   ++++++++i+ +++k    ++ ++   +k   v v +++ s d+ +  + +k+ e   a D  +  gya   + e 
       EPX73137.1  59 TT---RSQVDYQKIIRNTIKTIGYDSSEKGFDHKTCNVLVAIEQQSPDIAQGLHYEKAlEELGAGDQGIMFGYASDETPEL 136
                      44...5678888888888888655554443334567778888888888887777666656678888888888887655554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       472  (0.0263261); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2756.04
//
Query:       EPX73138.1  [L=278]
Description: glycerate kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.3e-06   25.4   0.0    1.2e-05   24.7   0.0    1.3  1  Zeta_toxin    Zeta toxin
    0.00021   21.7   0.0    0.00034   21.1   0.0    1.3  1  AAA_16        AAA ATPase domain
    0.00087   18.3   0.0     0.0019   17.2   0.0    1.5  1  AAA_PrkA      PrkA AAA domain
     0.0026   17.1   0.0     0.0027   17.0   0.0    1.2  1  KAP_NTPase    KAP family P-loop domain
     0.0032   17.2   0.0      0.007   16.1   0.0    1.6  1  PRK           Phosphoribulokinase / Uridine kinase family
     0.0043   17.1   0.0     0.0094   16.0   0.0    1.6  1  AAA_14        AAA domain
     0.0063   17.1   0.0      0.012   16.1   0.0    1.5  1  AAA_18        AAA domain
     0.0094   16.5   0.0      0.021   15.3   0.0    1.6  2  ABC_tran      ABC transporter
  ------ inclusion threshold ------
      0.014   15.2   0.0      0.033   14.0   0.0    1.6  2  ATP_bind_1    Conserved hypothetical ATP binding protein
      0.019   15.2   0.0      0.098   12.9   0.0    2.0  2  AAA_22        AAA domain
      0.034   13.9   0.3       0.12   12.1   0.3    2.0  1  AAA_24        AAA domain
      0.037   14.0   0.0      0.076   13.0   0.0    1.5  1  AAA_5         AAA domain (dynein-related subfamily)
      0.039   13.9   0.0      0.062   13.2   0.0    1.3  1  APS_kinase    Adenylylsulphate kinase
      0.041   13.6   0.0        0.1   12.4   0.0    1.6  1  AAA_29        P-loop containing region of AAA domain
      0.055   13.1   0.0      0.084   12.5   0.0    1.3  1  SRP54         SRP54-type protein, GTPase domain
      0.072   12.7   0.0       0.13   11.9   0.0    1.4  1  cobW          CobW/HypB/UreG, nucleotide-binding domain
      0.093   11.7   0.0       0.14   11.1   0.0    1.2  1  MeaB          Methylmalonyl Co-A mutase-associated GTPase Mea
      0.097   11.7   0.0       0.18   10.8   0.0    1.4  1  T2SSE         Type II/IV secretion system protein
        0.1   13.0   0.0        0.2   12.0   0.0    1.5  1  RNA_helicase  RNA helicase
       0.12   12.9   1.5       0.38   11.2   1.5    1.8  1  AAA_23        AAA domain
       0.13   12.1   0.0       0.26   11.2   0.0    1.5  1  NACHT         NACHT domain
       0.14   10.3   0.0       0.23    9.6   0.0    1.3  1  FTHFS         Formate--tetrahydrofolate ligase
       0.18   12.0   0.0        0.4   10.8   0.0    1.6  2  AAA_33        AAA domain
       0.22   11.2   0.0        0.4   10.4   0.0    1.4  1  AAA_30        AAA domain
       0.31   11.9   2.7       0.22   12.4   0.8    1.7  1  Rho_Binding   Rho Binding


Domain annotation for each model (and alignments):
>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.0   1.7e-08   1.2e-05       9      66 ..      19      77 ..      12      86 .. 0.83

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 1.7e-08
  Zeta_toxin  9 kypsqerPklillgGqpGAGKselaellkdele..rqgnvvrldpDdlRelhPeyeeilk 66
                + +++ rP ++ ++G +G+GKs+la  lk+++e  +++ vv ++ Dd+   h e  +i k
  EPX73138.1 19 P-KPEGRPFILGISGPQGSGKSTLALTLKEAMErsKEKAVVNISLDDFYLTHEEQVNIAK 77
                3.5669***************************989999********9888766655555 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0   4.7e-07   0.00034      19      69 ..      20      66 ..       5     127 .. 0.71

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 4.7e-07
      AAA_16 19 vrsgrpelvllsGesGvGKsslvrellralekdg.giflrgkcdqlesaipy 69
                  +grp ++ +sG++G+GKs+l+ +l++a+e+++   +++   d++     y
  EPX73138.1 20 KPEGRPFILGISGPQGSGKSTLALTLKEAMERSKeKAVVNISLDDF-----Y 66
                4567778899******************999995456666666666.....2 PP

>> AAA_PrkA  PrkA AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   2.7e-06    0.0019      66     115 ..       4      52 ..       1      72 [. 0.83

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 2.7e-06
    AAA_PrkA  66 leetiekiveyfraaaqrleerkqilyllGPvggGksslverlkklleaa 115
                 l+  ++k+v+++++   + e r  il + GP g+Gks+l+ +lk+++e +
  EPX73138.1   4 LDIILQKVVQFYEKQP-KPEGRPFILGISGPQGSGKSTLALTLKEAMERS 52 
                 5667899999888765.579999*************************87 PP

>> KAP_NTPase  KAP family P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   3.7e-06    0.0027      18      68 ..      23      72 ..      11     206 .. 0.91

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 3.7e-06
  KAP_NTPase 18 atpivvgLygkWGsGKssllnkledelkefakpvrflfaefnawsfkggdd 68
                ++p+++g++g+ GsGKs+l   l+++++   k++ ++ ++++ +  +++++
  EPX73138.1 23 GRPFILGISGPQGSGKSTLALTLKEAMERS-KEKAVVNISLDDFYLTHEEQ 72
                79**************************99.77777777777777776555 PP

>> PRK  Phosphoribulokinase / Uridine kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   9.7e-06     0.007       1      49 [.      27      74 ..      27     158 .. 0.57

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 9.7e-06
         PRK  1 vIgvagsSGaGkttvarklekifgrekvkaaei.egdsflrldraekdle 49
                ++g++g+ G+Gk+t+a +l+++++r k ka++   +d f  +   e++++
  EPX73138.1 27 ILGISGPQGSGKSTLALTLKEAMERSKEKAVVNiSLDDFYLTH--EEQVN 74
                78**********************9988855322444443333..33333 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   1.3e-05    0.0094       4      48 ..      27      72 ..      24     104 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.3e-05
      AAA_14  4 ilvitGaRrvGKTtllkqlikell..vkkesilyinldderdkklad 48
                il i+G+  +GK+tl+ +l  e +   k++ ++ i+ldd  ++ +++
  EPX73138.1 27 ILGISGPQGSGKSTLALTLK-EAMerSKEKAVVNISLDDFYLTHEEQ 72
                789************98885.4445889999999***9977755443 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   1.7e-05     0.012       2      25 ..      29      57 ..      28     107 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.7e-05
      AAA_18  2 lltGtpGvGKttlakeLskrlgf.....g 25
                +++G++G+GK+tla  L++ ++      +
  EPX73138.1 29 GISGPQGSGKSTLALTLKEAMERskekaV 57
                599**************998633343331 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   2.9e-05     0.021      13      44 ..      27      58 ..      25     135 .. 0.80
   2 ?   -2.5   0.0       9.2   6.6e+03      59      63 ..     206     210 ..     168     241 .. 0.54

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 2.9e-05
                EEEEEESTTSSHHHHHHHHTTSS--SEEEEEE CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 13 kvaivGenGaGKStLlkllagllkpteGeill 44
                +++i G+ G+GKStL+ +l + ++  +++  +
  EPX73138.1 27 ILGISGPQGSGKSTLALTLKEAMERSKEKAVV 58
                579***************99998887777633 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 9.2
                 HCEEE CS
                 xxxxx RF
    ABC_tran  59 keigv 63 
                 +ei++
  EPX73138.1 206 QEIKY 210
                 22222 PP

>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   4.6e-05     0.033       1      32 [.      30      60 ..      30      78 .. 0.87
   2 ?   -2.4   0.0       4.6   3.3e+03      76      91 ..     177     192 ..     158     225 .. 0.68

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 4.6e-05
  ATP_bind_1  1 vvGpaGsGKttfvgalseilelrgrsvavvNL 32
                + Gp GsGK+t+  +l e +e + ++ avvN+
  EPX73138.1 30 ISGPQGSGKSTLALTLKEAMERS-KEKAVVNI 60
                67*******************99.77788885 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 4.6
  ATP_bind_1  76 resldwldeelekeed 91 
                 ++sl w++e+l+++e+
  EPX73138.1 177 EDSLLWVNEQLKNYES 192
                 4555566666655544 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   0.00014     0.098       9      34 ..      29      54 ..      23     132 .. 0.76
   2 ?   -0.4   0.0       1.8   1.3e+03      52      83 ..     189     227 ..     169     239 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.00014
      AAA_22  9 vvtGesGtGKTtllrrlleqldeeak 34
                 + G+ G+GK+tl+ +l+e  ++ ++
  EPX73138.1 29 GISGPQGSGKSTLALTLKEAMERSKE 54
                589***************99865443 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 1.8
      AAA_22  52 sskdllrellralglelka.......erlsseelleale 83 
                 + +++++++ + ++le+ +       + ++++ l ++++
  EPX73138.1 189 NYESIFKKIDSLVQLEAQEikyvyewRLQQEHTLKTLIH 227
                 578889999999998888888888874444444444444 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.3   0.00017      0.12       6      43 ..      29      65 ..      25     224 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00017
      AAA_24  6 liyGpsgiGKTtlakelgpkplfidtekGlksldadkf 43
                 i Gp+g+GK+tla++l +++     ek + ++  d+f
  EPX73138.1 29 GISGPQGSGKSTLALTL-KEAMERSKEKAVVNISLDDF 65
                688**************.88887777776666655555 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   0.00011     0.076       5      28 ..      31      54 ..      28      70 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 0.00011
                E--SSSSHHHHHHHGGGGBS--EE CS
       AAA_5  5 vGppGtgKselaerlaaalnreve 28
                 Gp+G+gKs+la  l++a++r+ e
  EPX73138.1 31 SGPQGSGKSTLALTLKEAMERSKE 54
                6******************66544 PP

>> APS_kinase  Adenylylsulphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   8.7e-05     0.062       2      34 ..      25      57 ..      24      67 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 8.7e-05
                -EEEEEESSTTSSHHHHHHHHHHHHHHTT--EE CS
  APS_kinase  2 gvvvwltGlsgsGKstianalekkLvekgisvy 34
                ++++ ++G  gsGKst+a +l++++++++ +++
  EPX73138.1 25 PFILGISGPQGSGKSTLALTLKEAMERSKEKAV 57
                788899******************999886654 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   0.00014       0.1      27      38 ..      30      41 ..      14      53 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00014
      AAA_29 27 ltGpsGsGKSTl 38
                ++Gp+GsGKSTl
  EPX73138.1 30 ISGPQGSGKSTL 41
                99*********9 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   0.00012     0.084       5      61 ..      29      86 ..      25     111 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00012
                EEEESTTSSHHHHHHHHHHHHHHT.TS-EEEEEESTSSTTHHHHHHHHHHHTTEEEEE CS
       SRP54  5 llvGlqGaGKTttlaKLaallkke.gkkvllvaaDtfRaaAveQLktlaeklgvpvik 61
                 + G+qG+GK t +  L + ++++ +k v+ +++D f     eQ+++   + + p+i+
  EPX73138.1 29 GISGPQGSGKSTLALTLKEAMERSkEKAVVNISLDDFYLTHEEQVNIAKLHPNNPLIQ 86
                578****************9999856777789*****999999998877666666665 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00018      0.13       2      37 ..      27      66 ..      26      89 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00018
                EEEEEESTTCCHHHHHHHHH.CT--SS-EEEE...ESS-S CS
        cobW  2 vtvltGflGsGKTtLlnhll.enraglklavi...vNefg 37
                +++++G+ GsGK+tL  +l  + +++++ av+   + +f+
  EPX73138.1 27 ILGISGPQGSGKSTLALTLKeAMERSKEKAVVnisLDDFY 66
                5789***********9999853333333344311144665 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0    0.0002      0.14      26      63 ..      22      58 ..       8      64 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.0002
                -S-SEEEEEEE-TTSSHHHHHHHHHHHHHCTT--EEEE CS
        MeaB 26 aGraqvvGltGvPGaGkstlvealglelrrrGkrvavl 63
                 Gr   +G+ G  G+Gkstl   l + + r  ++ av+
  EPX73138.1 22 EGRPFILGISGPQGSGKSTLALTLKEAMERSKEK-AVV 58
                69999***************99999888766555.454 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00025      0.18     134     162 ..      30      58 ..      20     100 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00025
       T2SSE 134 vsGgTgsGKttllyallkeinksderivt 162
                 +sG+ gsGK+tl+ +l + ++ s+e+ v+
  EPX73138.1  30 ISGPQGSGKSTLALTLKEAMERSKEKAVV 58 
                 9************9999999988665443 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00028       0.2       3      26 ..      30      53 ..      28      79 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00028
  RNA_helicase  3 lyGpsgeGKStlakeLakallkkl 26
                  ++Gp+g GKStla +L +a++++ 
    EPX73138.1 30 ISGPQGSGKSTLALTLKEAMERSK 53
                  79*************888887443 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   1.5   0.00053      0.38      22      68 ..      28      70 ..       6     228 .. 0.51

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00053
      AAA_23 22 tlItGpNGaGKTTildAiklaLygetprlsrksgrgfeksdveiese 68
                  I+Gp G+GK+T+   +k a+   +++       ++  +d+ +++e
  EPX73138.1 28 LGISGPQGSGKSTLALTLKEAMERSKEKAV----VNISLDDFYLTHE 70
                56***********97666666554333333....3455555555554 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00037      0.26       5      31 ..      30      56 ..      27      92 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00037
                EEC-TTTCHHHHHHHHHHHHCTS-SCC CS
       NACHT  5 lqGeaGsGKTtLlqklalawaegklpq 31
                + G++GsGK+tL+  l +a+ ++k ++
  EPX73138.1 30 ISGPQGSGKSTLALTLKEAMERSKEKA 56
                89***************9999998665 PP

>> FTHFS  Formate--tetrahydrofolate ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.0   0.00032      0.23      65      93 ..      32      60 ..      10      62 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00032
                -TT--SHHHHHHHHHHHHHHTT--EEEEE CS
       FTHFS 65 tplGeGKttttigLaqalnklgkkavaal 93
                 p G GK+t ++ L +a+++ ++kav+++
  EPX73138.1 32 GPQGSGKSTLALTLKEAMERSKEKAVVNI 60
                589**********************9986 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00056       0.4       5      37 ..      31      69 ..      27     107 .. 0.75
   2 ?   -2.7   0.0       8.1   5.8e+03      66      97 ..     168     199 ..     164     208 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00056
      AAA_33  5 vGlpGsGKstlaerl...lkklg...avllssdtlrrrl 37
                 G++GsGKstla  l   +++ +   +v +s d+++ ++
  EPX73138.1 31 SGPQGSGKSTLALTLkeaMERSKekaVVNISLDDFYLTH 69
                6***********998555333335546668888766555 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 8.1
      AAA_33  66 alsagrnvildatnlsrrerarflklarrlgv 97 
                 a+s +++++ d+ ++ +++ +++ ++++++++
  EPX73138.1 168 ARSTKWQCLEDSLLWVNEQLKNYESIFKKIDS 199
                 67888888888888888888888888887764 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00056       0.4      22      50 ..      29      58 ..      23      64 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00056
      AAA_30 22 vltGpAGtGKttalkalreaweaa.ggrvi 50
                 + Gp G+GK+t+  +l+ea+e++ ++ v+
  EPX73138.1 29 GISGPQGSGKSTLALTLKEAMERSkEKAVV 58
                589*******************99556665 PP

>> Rho_Binding  Rho Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.8   0.00031      0.22      15      55 ..     183     224 ..     175     225 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00031
  Rho_Binding  15 lnkklkkleeelekak.eeeeeieklkasyekqLktErlLKt 55 
                  +n++lk+ e+ ++k     + e +++k  ye  L++E +LKt
   EPX73138.1 183 VNEQLKNYESIFKKIDsLVQLEAQEIKYVYEWRLQQEHTLKT 224
                  5899999999999999558899999****************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       660  (0.0368119); expected 358.6 (0.02)
Passed bias filter:                      503  (0.0280551); expected 358.6 (0.02)
Passed Vit filter:                       102  (0.00568911); expected 17.9 (0.001)
Passed Fwd filter:                        25  (0.00139439); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              25  [number of targets reported over threshold]
# CPU time: 0.52u 0.31s 00:00:00.83 Elapsed: 00:00:00.44
# Mc/sec: 1886.13
//
Query:       EPX73139.1  [L=297]
Description: C-4 methylsterol oxidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.2e-25   89.5  23.0    4.6e-25   88.5  23.0    1.5  1  FA_hydroxylase  Fatty acid hydroxylase superfamily
  ------ inclusion threshold ------
        1.2    9.6   2.7        5.8    7.3   0.1    2.3  2  Sprouty         Sprouty protein (Spry)


Domain annotation for each model (and alignments):
>> FA_hydroxylase  Fatty acid hydroxylase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.5  23.0   5.1e-29   4.6e-25       2     133 .]     140     276 ..     139     276 .. 0.88

  Alignments for each domain:
  == domain 1  score: 88.5 bits;  conditional E-value: 5.1e-29
  FA_hydroxylase   2 llallledfveYwvHrllHrvkllwrrlHkvHHsseaptalaalrahpleallla.llllllllllg.....plsalllvlvlaallelliHsgl 90 
                     +++++led+++Yw+Hrl+H   +++r +HkvHH+++ap  l+a++ahple++ll+  +++++l++       +l +++++++l+ ++++  Hsg 
      EPX73139.1 140 AIFFFLEDTWHYWAHRLFHY-GIFYRIIHKVHHRYSAPFGLSAEYAHPLEIVLLGaGTVFVPLMWCYfthdlHLITMYIWIMLRLFQAVDSHSG- 232
                     7899***************6.68*******************************9877776664443446788888888***************. PP

  FA_hydroxylase  91 hvslgwll...erllatpraHrlHHskneegnfgvllslwDrlfgT 133
                      ++++w l   + + a++++H+ HH  ++  n+++++++wD +++T
      EPX73139.1 233 -YDFPWSLnkiMPIWAGAEHHDYHHMAFK-DNYSSSFRWWDSVLHT 276
                     .9******55533489*************.************9987 PP

>> Sprouty  Sprouty protein (Spry)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.5      0.03   2.7e+02      63      92 ..      91     120 ..      64     127 .. 0.84
   2 ?    7.3   0.1   0.00065       5.8      56      88 ..     175     207 ..     146     216 .. 0.72

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.03
     Sprouty  63 kekrvarwlllallslvvPCLlcYlplkac 92 
                 ++  ++r +ll+ +++ +P ++++ p+ a+
  EPX73139.1  91 EQWECTRLVLLSHFTVELPQIWLFDPMCAT 120
                 5667899*****************999765 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.00065
     Sprouty  56 epcsccskekrvarwlllallslvvPCLlcYlp 88 
                 +p+   ++       +ll++ +++vP ++cY+ 
  EPX73139.1 175 APFGLSAEYAHPLEIVLLGAGTVFVPLMWCYFT 207
                 566655556666777899999**********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (297 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       422  (0.0235373); expected 358.6 (0.02)
Passed bias filter:                      231  (0.0128842); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.37
# Mc/sec: 2414.37
//
Query:       EPX73140.1  [L=433]
Description: hypothetical protein SOCG_00896 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.09   13.1   0.1         15    6.0   0.0    2.4  2  Utp12     Dip2/Utp12 Family


Domain annotation for each model (and alignments):
>> Utp12  Dip2/Utp12 Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0   0.00083        15      21      56 ..      80     114 ..      77     131 .. 0.88
   2 ?    4.5   0.0    0.0024        42      34      65 ..     215     244 ..     197     262 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.00083
                 HHHCS-CTCHHHHHHHHHHHH.HTTTTHHHHHHHHH CS
       Utp12  21 tvlrLpssyvlkLLeflaerlaeksphlelllrwlk 56 
                 t+++L +s  l++L ++++  +e+s    l++ w  
  EPX73140.1  80 TCANLRPSNCLPILSWIKQ-QQEDSGLNGLHCIWWV 114
                 99*****************.6699998888888865 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.0024
                 HHHHHHHH.HTTTTHHHHHHHHHHHHHHHHHH CS
       Utp12  34 LeflaerlaeksphlelllrwlkallrvHgsy 65 
                 L+f+a   ++k ph++++  +l+ +l+   ++
  EPX73140.1 215 LTFVAA--QQKDPHCKFHSGILRGILQLKIAT 244
                 677777..58999*************887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (433 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       429  (0.0239277); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.21s 00:00:00.65 Elapsed: 00:00:00.36
# Mc/sec: 3609.29
//
Query:       EPX73141.1  [L=203]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      1e-07   32.1   0.1      1e-07   32.1   0.1    2.5  3  DUF2011    Fungal protein of unknown function (DUF2011)
  ------ inclusion threshold ------
       0.23   11.4   7.0       0.68    9.9   0.1    2.3  2  Jak1_Phl   Jak1 pleckstrin homology-like domain
        6.3    7.2   8.7       0.23   11.8   1.5    2.2  3  TFIIE-A_C  C-terminal general transcription factor TFIIE alph


Domain annotation for each model (and alignments):
>> DUF2011  Fungal protein of unknown function (DUF2011)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.1      0.17     1e+03      51      71 ..      14      34 ..       8      45 .. 0.83
   2 !   32.1   0.1   1.7e-11     1e-07      19      88 ..      86     148 ..      64     149 .. 0.84
   3 ?   -2.4   0.1         1   6.1e+03      24      30 ..     173     178 ..     158     196 .. 0.52

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.17
     DUF2011 51 eeereqfeeaAvsgedvlaea 71
                +e++ + e+++v++e+ l++ 
  EPX73141.1 14 QEKEPEVEQVSVDAEKLLSQR 34
                677888999*****9999876 PP

  == domain 2  score: 32.1 bits;  conditional E-value: 1.7e-11
     DUF2011  19 kirLrspspeegeggfivpeRpksYYfaeplseeereqfeeaAvsgedvlaeaksrwpgcelpwrvihlk 88 
                 +i+L++++       ++++ Rp +YY+ +  ++e+++ ++++  + e+ ++++ ++wp c+  ++vi++k
  EPX73141.1  86 TISLNDQEV------IVNQGRPVEYYVLQ-DTPERQAHLRASVFTFEQLMKAKDEPWPACQKSQKVINIK 148
                 455555444......59************.9**********************99*************98 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 1
     DUF2011  24 spspeeg 30 
                 +++++ +
  EPX73141.1 173 EKEQK-E 178
                 22222.2 PP

>> Jak1_Phl  Jak1 pleckstrin homology-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.1   0.00011      0.68      73     110 ..      61      98 ..       3     101 .. 0.80
   2 ?    3.3   3.2     0.013        75      25      71 ..     140     186 ..     118     202 .. 0.51

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00011
    Jak1_Phl  73 kkkkqeekekkeekWalFcdfqditHivikeskvsihk 110
                 +++ +eek+++e++ + F  f di  i + +++v +++
  EPX73141.1  61 SNDFSEEKSENEDENVAFNLFSDINTISLNDQEVIVNQ 98 
                 445566777888999*******************9986 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.013
    Jak1_Phl  25 eeppthevlv.tGteGiqwrlvqeeessegeksrkskekkkskkkkae 71 
                 +++++ ++ v  G++  +wr+++++  + ++  +++++k+k k  + +
  EPX73141.1 140 KSQKVINIKVdDGKKKSRWRPSKKR-RTRMKILKEKEQKEKLKAFQKK 186
                 4455555555347888889988876.2333333333333333222211 PP

>> TFIIE-A_C  C-terminal general transcription factor TFIIE alpha
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1       0.4   2.4e+03      32      56 ..      14      36 ..       2      50 .. 0.58
   2 ?   11.8   1.5   3.8e-05      0.23      10      60 ..      49     112 ..      40     119 .. 0.76
   3 ?   -2.3   0.1      0.93   5.5e+03      30      34 ..     172     176 ..     150     188 .. 0.48

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.4
   TFIIE-A_C 32 eeeeeeaddptvmVaGrpvslsevs 56
                +  e e ++ +v+V+  +   + +s
  EPX73141.1 14 Q--EKEPEVEQVSVDAEKLLSQRLS 36
                3..3333366777766666555555 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 3.8e-05
   TFIIE-A_C  10 edskskkaaataseseveeeeeeeeeee..............addptvmVaGrpvslsevsqrpe 60 
                 e+s+++ ++ ta++++ +ee++e+e+e+              +d+ +++ +Grpv +  +++ pe
  EPX73141.1  49 ENSPPAVPE-TAESNDFSEEKSENEDENvafnlfsdintislNDQEVIVNQGRPVEYYVLQDTPE 112
                 344555555.5555567777787777778***********96666666668******99999998 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 0.93
   TFIIE-A_C  30 eeeee 34 
                 +e e 
  EPX73141.1 172 KEKEQ 176
                 22222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1681  (0.0937587); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 1433.92
//
Query:       EPX73142.1  [L=739]
Description: GTPase activating protein Gyp7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-34  119.0  16.5    1.3e-33  116.5  16.5    2.1  1  RabGAP-TBC  Rab-GTPase-TBC domain
    1.9e-10   40.4   0.0    3.8e-08   33.0   0.0    2.4  2  PH_RBD      Rab-binding domain (RBD)


Domain annotation for each model (and alignments):
>> RabGAP-TBC  Rab-GTPase-TBC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.5  16.5   1.4e-37   1.3e-33       2     215 .]     415     655 ..     414     655 .. 0.88

  Alignments for each domain:
  == domain 1  score: 116.5 bits;  conditional E-value: 1.4e-37
  RabGAP-TBC   2 elRgevWklllgyep.............evkrlkksekkqeksekeksklekseeskelsqIkkDvprtfp...........es....esfknkqgqnq 72 
                 +lR+evW++ll+++p             + ++++ + k+++++   ++ +  s +++  ++I+kDv+rt +           +     ++  ++   ++
  EPX73142.1 415 SLRKEVWPFLLDIYPwdsteqerkalylSLQDEYIRLKRRWYDDIPRQFNDRSFIEQ-KNRIEKDVHRTDRqheyfqeedlpHPdpqsTFTGTNLHMEM 512
                 69************************9755666666666666666666666666555.5************987777655552266646666678899* PP

  RabGAP-TBC  73 LeriLkaysiynpevgYcqGmndivaplllvsldeeeaFwcfvsLlekyklrdlytsslpglkrklkvleellkkkdpklykhlkeegldlelfaikwf 171
                 ++  L++y+ y+ e+gY+qGm+d+++p+++++ d   aFw +v ++  ++l++++  +++g++r+l++l++l++  d++l+ hl++ +  + +  ++ +
  EPX73142.1 513 MKDMLLTYNEYDTELGYVQGMSDLLSPIYVTFSDNALAFWGMVGMM--KRLHHNFLRDQSGMQRQLETLRQLIQLMDKELFIHLEKTDSSNLFCFFRML 609
                 *****************************9999*************..*****************************************999999**** PP

  RabGAP-TBC 172 ltlflrefpletvlrlwDlllege...kfvllrvalailklleeell 215
                 l +++ref++e++l+lwD+l++++      ++++a ai ++++e ll
  EPX73142.1 610 LIYYKREFDWEILLKLWDVLFTNYlsyDY-HIFIAYAIAERHREVLL 655
                 ******************88877778666.9***********99886 PP

>> PH_RBD  Rab-binding domain (RBD)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.0   0.0   4.2e-12   3.8e-08       2     124 ..      31     160 ..      30     173 .. 0.77
   2 !    5.0   0.0    0.0017        15     124     164 ..     189     229 ..     185     234 .. 0.81

  Alignments for each domain:
  == domain 1  score: 33.0 bits;  conditional E-value: 4.2e-12
      PH_RBD   2 llfeKnnVflets.dqdslikGvislvekks.........dvilkWiPnqlmkkkdqpssasskseelfdpdyepdwavistvesddrskwaitvslke 90 
                 llf+K  V +++  ++++ i G++sl ++k+         d++l W+P+  +k++ +   +  ++ e   +  e d+     ve+ d+ ++ +++ l+ 
  EPX73142.1  31 LLFSKSKVCIHPTtKIKDNISGYLSLSKTKTnsgtpltgnDILLSWVPDSFLKSRPR-DLNVFRTAE---ASTESDL--KQLVEIPDHLDYSFSIRLNS 123
                 89*********98799**********998432245555558********98876653.334444444...4555555..5679**************** PP

      PH_RBD  91 lksirkskpgless...ylilvtkdGvslpplhFeqG 124
                 + si    p+ ++    ++i   + G slppl+F+  
  EPX73142.1 124 IYSILFRPPKYGWNygsIVINLRNSGESLPPLFFHDD 160
                 ****888888887633345557899*********975 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.0017
      PH_RBD 124 Ggtrallkalskylllalspldsrlllvvrldp.plskskek 164
                 Gg   l+  l+ky+ l  s+ + +l+lv++  +  l  + ++
  EPX73142.1 189 GG-THLIMHLKKYINLEHSTHEPQLYLVNPSPEdTLAFQSHD 229
                 45.478899*******************99866577777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (739 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       487  (0.0271627); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.25s 00:00:00.85 Elapsed: 00:00:00.41
# Mc/sec: 5355.73
//
Query:       EPX73143.1  [L=466]
Description: aspartyl aminopeptidase Aap1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   4.4e-180  599.1   0.0     5e-180  598.9   0.0    1.0  1  Peptidase_M18  Aminopeptidase I zinc metalloprotease (M18)
    0.00018   20.7   0.0     0.0015   17.6   0.0    2.0  2  Peptidase_M42  M42 glutamyl aminopeptidase


Domain annotation for each model (and alignments):
>> Peptidase_M18  Aminopeptidase I zinc metalloprotease (M18)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  598.9   0.0  5.6e-184    5e-180       1     432 []      21     452 ..      21     452 .. 0.96

  Alignments for each domain:
  == domain 1  score: 598.9 bits;  conditional E-value: 5.6e-184
                    HHHH--SHHHHHHHHHHHHHCTT-EESTTTS-ST...STTCEEEEEEETTTEEEEEEEETTS-GGG--EEEEEE---SEEEEECCEEEEETTEEEE CS
  Peptidase_M18   1 finksptpyhvvaevaekllkagfkelsekekwk...iepggkyfvtrngssliAFavgkkykaengfsiigaHtDsptlrvKpkskkkaegylqv 93 
                    f+n+sptpyhv++++ae + ++gf++lsek++++    ++g++y+v+rn+ss++AF++g+k+k++ngfsii++HtDsptlr+Kpkskk+a+gy+q+
     EPX73143.1  21 FVNSSPTPYHVTKNLAEYYNSHGFQYLSEKQELSpslLKNGKSYYVVRNQSSIVAFSIGGKWKPGNGFSIIATHTDSPTLRLKPKSKKSANGYMQI 116
                    9********************************999779********************************************************* PP

                    EEEEESS.SSGGGTT--EEEEEEEEECTT--EEEEEECCSTT---BBB----GGG-GG..GSS--TTTTTSEEEEEEEE------TTCCCT.CCHH CS
  Peptidase_M18  94 gvetYGggiwetWldrdLsvaGrvlvkkkkeekleaklvnierPvlriPnlaiHLdrdineefkfneetelepilglaeeeeeekedkekknkhkk 189
                    gve+YGggiw++W+drdLs+aGrvlv+++ ++++ +++v+i+rP++riP+laiHLdr++n++f+fn+ete+ p+lgl++e ++e+  ++ ++ h++
     EPX73143.1 117 GVEQYGGGIWHSWFDRDLSLAGRVLVQED-DGRVVQRNVHIDRPLVRIPTLAIHLDRSANASFSFNMETEFAPLLGLEQELSKEEVSED-NEAHHP 210
                    ****************************7.7**********************************************887655554444.479*** PP

                    HHHHHHHHHHT..S-CCCCCCCEEEEEE-S--EEETTTT-EEEESSHHHHHHHHHHHHHHCCCCHT.-TTTS-SEEEEEEESSCCGTS-STTSGGC CS
  Peptidase_M18 190 alleliaeelg..vevedivdlelilvdaqkakivGiekeflfaprlDnkvscfaaleallesaed.sleeedkvrivalfDnEEvGStsaqGads 282
                    all+lia elg  v++++ivd+elil d +ka+++Gi++ef+f+prlDn+ ++f+a ++l++s+++ sle+++++r+va+fD+EE+GS saqGa+s
     EPX73143.1 211 ALLSLIASELGsdVSPKSIVDFELILGDYEKARLGGIHEEFVFSPRLDNQGMTFSASRSLINSLSEnSLEDDPCIRVVASFDHEEIGSVSAQGAES 306
                    ***********8889999*********************************************9988***************************** PP

                    THHHHHHHHHHHHHCSTT-HCHHHHHC-EEEEE--EE---TTSGGGS-TTTS--TTSEEEEEEETTSSSTT-HHHHHHHHHHHHHHC-EEEEEEE- CS
  Peptidase_M18 283 nfleevlerisialkkseafeeavlakSlliSaDvahaihPnysskheenhapllnkGvvikvnanqryatnsagaallkevaqkanvklQelvvr 378
                    nfl +vler+s ++  ++++++  +  S+liSaD+ahaihPnyssk+e+ + ++lnkG+v+k+nanqry+tn+ g+a++k++ q  + ++Q++vvr
     EPX73143.1 307 NFLLSVLERLSGSM--ESYYSS--MRSSFLISADMAHAIHPNYSSKYESTNYAELNKGTVLKINANQRYMTNAHGMAIIKRASQLSKAPIQVFVVR 398
                    **********9988..445554..379********************************************************************* PP

                    TTS----HCHHHHHHHHT-EEEEEE-EEBSTTSSSEEEECCHHHHHHHHHHHCC CS
  Peptidase_M18 379 ndspcGstigpilaaktGirtiDlGaaqlsmHSireltgskdveeavklfkaFf 432
                    ndspcGstigp+laa+tGi t+DlG+++lsmHS+re++g+kd+e+ v+l++aFf
     EPX73143.1 399 NDSPCGSTIGPKLAAMTGIPTLDLGNPMLSMHSCREMCGTKDFEYSVQLLSAFF 452
                    *****************************************************9 PP

>> Peptidase_M42  M42 glutamyl aminopeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0     0.024   2.2e+02     124     179 ..     248     307 ..     240     314 .. 0.75
   2 !   17.6   0.0   1.7e-07    0.0015     180     292 .]     327     447 ..     315     447 .. 0.79

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.024
                    TTECEEETTHHHH.HHHHHHHHHHHHHCTSS-S..SEEEEEEES.TCTTTSHHHHHHHHH CS
  Peptidase_M42 124 angkivskalDdr.agvavllellkelkeeele..atvylvatv.qEEvGlrGaktsaek 179
                    +++++ s  lD++ +   +  +l+++l+e++le    + +va+  +EE+G   a+ + ++
     EPX73143.1 248 HEEFVFSPRLDNQgMTFSASRSLINSLSENSLEddPCIRVVASFdHEEIGSVSAQGAESN 307
                    6788999999998345566778999999999997644556666537****9999877665 PP

  == domain 2  score: 17.6 bits;  conditional E-value: 1.7e-07
                    H--SEEEEEEEEEE-CSTTSTTTTSS....TTS-CEEEEEETT.CCSHHHHHHHHHHHHHHTT--EEEEEESS...SSSTHHHHHTSTTTSEEEEE CS
  Peptidase_M42 180 ikpdiaiavDvtaagdtpgskekeak....lgkGpvirvkDas.giyhpklrkkllelAkknnipyqlevlsg...ggtDAgaihltgegvptali 267
                    ++ +++i  D+++a + + s+++e++    l+kG+v+++  ++ ++++ +    ++++ +  + p+q+ v+++    g+  g    + +g+pt+ +
     EPX73143.1 327 MRSSFLISADMAHAIHPNYSSKYESTnyaeLNKGTVLKINANQrYMTNAHGMAIIKRASQLSKAPIQVFVVRNdspCGSTIGPKLAAMTGIPTLDL 422
                    556788999999997776666666556789********98776366677777777777777899***987765222567777778889******** PP

                    EEEEBSTTSTTEEEEHHHHHHHHHH CS
  Peptidase_M42 268 siptryiHspvevahlddleatvkL 292
                    + p+  +Hs  e++  +d+e  v+L
     EPX73143.1 423 GNPMLSMHSCREMCGTKDFEYSVQL 447
                    *******************988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (466 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       416  (0.0232026); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.28s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 3098.03
//
Query:       EPX73144.1  [L=1139]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.2e-05   22.4   0.4      0.002   17.1   0.3    2.6  2  Ge1_WD40      WD40 region of Ge1, enhancer of mRNA-decapping 
  ------ inclusion threshold ------
      0.017   14.9   3.0      0.027   14.3   3.0    1.3  1  DUF445        Protein of unknown function (DUF445)
      0.067   13.2  10.4       0.46   10.5   7.8    2.5  1  Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C
       0.17   12.2   1.4       0.93    9.8   0.6    2.6  3  DUF2935       Domain of unknown function (DUF2935)
       0.56   11.0  13.4       0.88   10.4   1.0    2.9  2  FIVAR         FIVAR domain
        1.1    9.3   7.3       0.17   11.9   1.8    2.2  2  Laminin_II    Laminin Domain II


Domain annotation for each model (and alignments):
>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.3   6.8e-07     0.002      27     214 ..     323     495 ..     319     500 .. 0.71
   2 ?   -2.4   0.0      0.61   1.8e+03     257     311 ..     550     604 ..     542     617 .. 0.75

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 6.8e-07
    Ge1_WD40  27 vhregkylayaikvkntgeglvrvvnketeeraLlkglkgevldlafah....vsskillavdekgslfvykveeveskllvslllkveapietvvses 121
                 +h++  y+ay++  +     +vrv++++t +  Ll++ +++ + ++  +    + s++l+ +d +g++++y+++ +      +++++++  ++   +  
  EPX73144.1 323 IHTNKDYIAYSLTDE----PMVRVIEISTGRSFLLHNTSSH-KFVSVVWgddpIISNRLMVIDTTGQVIIYSIDMETA--SSKIIFQLSGAQSLSDPIK 414
                 79999******9765....6**********99999998764.4445555112245677889************98764..4667778877777788888 PP

    Ge1_WD40 122 drviWCPyipeedaeesdddeaskllvltrgdkaeiwsvdmiaskygsgelsveeiee.gllkieehsliveaafspdGtalatasedGevkff 214
                 +r  W P              +s+ ++++ ++++  +++d  ++    ++ s + i++  ++ i+      e  fs+dGt+ at  +d ++k +
  EPX73144.1 415 SRFHWYPN-------------SSRFFAVALSKHIIFFDLDLCHNIPLPISRSISVIQQlPCFLIDTGISAKEYDFSADGTVFATVDKDALIKVY 495
                 89999883.............3455666666666666666666655555555555555455666666677777788888888888888887776 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.61
    Ge1_WD40 257 rfaitgadnnselklWscelWtClqtikfapsiesslkaevlkaeldlsaeyLll 311
                 r++i     n+ + ++ + + + +q  +f++s +  + ++  + ++d   + Ll+
  EPX73144.1 550 RYLIVVYVLNQLITVFDTYSKKVVQKFRFSSSSNPVTTTSFSQLSVDHDRKTLLV 604
                 7888888889999999999999999999999944444444456677776666665 PP

>> DUF445  Protein of unknown function (DUF445)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   3.0   9.1e-06     0.027      59     208 ..     809     964 ..     783    1096 .. 0.73

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 9.1e-06
      DUF445  59 lakkLkeaev..asklaewlk..nptnkeslaaiveellkeiledlddesikellkknlk......kkleevipepllgkllellleeerhkkllddll 147
                 l++ + +++    + ++++l+   +t +e + +i+e ++++++++  +++i+ +++k++k      ++  e   ++ ++++   + + ++h + l d+l
  EPX73144.1 809 LKQLILNYKAnqEKHFNAVLSavSSTLTENTGKILESVVDQAIKNAVTDEIHDFVEKAMKdhfsilQTSLETKIKNYDESM---RSDYGQHTNTLSDIL 904
                 555555554411456777777888899999999999999999999999999999999999999777777777777777777...88999********** PP

      DUF445 148 driknllkdeevk.ekikelidelieeesgklvlesivsmflre.....ltsilekvksdpdhllre 208
                 d + n++k++ ++ ++ +el ++      ++  le+ v++++ +     + ++ e+ ++d+++++r 
  EPX73144.1 905 DLTNNVIKSQNESdKQFNELTSHV-----KN--LEGCVNSLMAKievleMRDVNERKDQDLTEETRP 964
                 *******98766604444444444.....33..5555555555500000333444444444444444 PP

>> Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   7.8   0.00015      0.46      11     131 ..     817     958 ..     806     964 .. 0.52

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00015
  Baculo_PEP_C  11 ggnqfldLtnvLnairlqnvqilaql.atllda.ietqLnalsedlksllaeldt.......................rldtlltnLtdalnalqdt 82 
                   ++nq   ++ vL+a+ + +++ ++++ ++ +d+ i++    +++++++ +++  +                       +  + +++L+d l   + +
    EPX73144.1 817 KANQEKHFNAVLSAVSSTLTENTGKIlESVVDQaIKNA---VTDEIHDFVEKAMKdhfsilqtsletkiknydesmrsDYGQHTNTLSDILDLTN-N 909
                   45666666666666665555554443133333213332...222333222222212222333333333333333333344444555544443333.3 PP

  Baculo_PEP_C  83 lrneLtnlnsiltnLlssvtNinstLnnllqalnnldlgalsqeledal 131
                   + +  +  +++ ++L+s v N++  +n+l++ ++ l+   +++  ++ l
    EPX73144.1 910 VIKSQNESDKQFNELTSHVKNLEGCVNSLMAKIEVLEMRDVNERKDQDL 958
                   33333556789*************************9999988777655 PP

>> DUF2935  Domain of unknown function (DUF2935)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.1      0.49   1.4e+03      40      93 ..     821     870 ..     795     877 .. 0.63
   2 ?    9.8   0.6   0.00031      0.93       5      78 ..     858     931 ..     854     983 .. 0.79
   3 ?   -3.2   0.0       3.4     1e+04      21      45 ..    1095    1119 ..    1090    1125 .. 0.80

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.49
     DUF2935  40 kkeFekllaeavelseglvrasseleeavakLneealk..ltreliqFkkellekv 93 
                 +k+F+++l+ + +      ++++++ + ++++ ++a+k  +t+e+ +F ++ ++++
  EPX73144.1 821 EKHFNAVLSAVSS------TLTENTGKILESVVDQAIKnaVTDEIHDFVEKAMKDH 870
                 4455555555544......5778888888888888887667788888888777765 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00031
     DUF2935   5 eehlFWlrimkeHalfiealldpkekdlikeakefkkeFekllaeavelseglvrasseleeavakLneealkl 78 
                 e+h F  + mk+H   ++++l+ k k++ +  ++   + +++l++  +l++ +++ ++e+ +++++L++++ +l
  EPX73144.1 858 EIHDFVEKAMKDHFSILQTSLETKIKNYDESMRSDYGQHTNTLSDILDLTNNVIKSQNESDKQFNELTSHVKNL 931
                 56778888888888888888888888888888888888888888888888888877778888888777776665 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 3.4
     DUF2935   21 iealldpkekdlikeakefkkeFek 45  
                  i+  l+   + lik++ +f   F++
  EPX73144.1 1095 IHPVLTLAKESLIKQSSNFSPVFQR 1119
                  6667788888999999999988876 PP

>> FIVAR  FIVAR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   5.3     0.024        72       3      63 ..     796     854 ..     794     857 .. 0.79
   2 ?   10.4   1.0   0.00029      0.88       7      68 ..     876     936 ..     873     938 .. 0.80

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.024
                 HHHHHHHCCHHHHHCSCCCCCC-CCHHHHHHHHHHHHHHHC...TSTTTTCCCHHHHHHHH CS
       FIVAR   3 tqLkdsinqatntktssnysnydqdkkdaynnalsaAnailnktnnpnatveqVnqalanl 63 
                 t+L+++++++ + +  + + ny++++ + +n+ lsa+ ++l +++++   ++ V+qa++n+
  EPX73144.1 796 TTLDKNVQKNYEGLK-QLILNYKANQEKHFNAVLSAVSSTLTENTGK-ILESVVDQAIKNA 854
                 566777776666666.8999*********************776544.5578888888886 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00029
                 HHHCCHHHHHCSCCCCCC-CCHHHHHHHHHHHHHHHC...TSTTTTCCCHHHHHHHHHHHHH CS
       FIVAR   7 dsinqatntktssnysnydqdkkdaynnalsaAnailnktnnpnatveqVnqalanlnqain 68 
                 +s++++ ++ + s  s+y q+  +++ + l+ +n++++ +n ++ + ++ +  ++nl+   n
  EPX73144.1 876 TSLETKIKNYDESMRSDYGQHT-NTLSDILDLTNNVIKSQNESDKQFNELTSHVKNLEGCVN 936
                 444444444455**********.**************9999999999999999999987666 PP

>> Laminin_II  Laminin Domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.5      0.47   1.4e+03       7      45 ..     793     833 ..     784     884 .. 0.64
   2 ?   11.9   1.8   5.7e-05      0.17      31      85 ..     895     952 ..     872     961 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.47
                 XXXXXX.XXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX CS
  Laminin_II   7 eaneta.kevleqlaplsqnlentkeklse.inrsveetne 45 
                  a+ t+ k+v++  ++l+q + n k++ ++ +n+ +  +  
  EPX73144.1 793 TALTTLdKNVQKNYEGLKQLILNYKANQEKhFNAVLSAVSS 833
                 45444435777778888877777777665414444444443 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 5.7e-05
                 XXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXX--TTTTTGGGHHHHHHHHHH. CS
  Laminin_II  31 eklseinrsveetnekvk...dankairdArrsvkkLeklapqLldklkelkqleeas 85 
                 +  +++ + ++ tn+++k   ++ k+ ++  + vk+Le  ++ L++k++ l+++ +++
  EPX73144.1 895 QHTNTLSDILDLTNNVIKsqnESDKQFNELTSHVKNLEGCVNSLMAKIEVLEMRDVNE 952
                 4556677777888888884446678999999***********************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1139 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1159  (0.0646439); expected 358.6 (0.02)
Passed bias filter:                      527  (0.0293937); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.88u 0.30s 00:00:01.18 Elapsed: 00:00:00.48
# Mc/sec: 7064.16
//
Query:       EPX73145.1  [L=455]
Description: C-24(28) sterol reductase Sts1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   9.9e-173  574.8  22.1   1.1e-172  574.6  22.1    1.0  1  ERG4_ERG24  Ergosterol biosynthesis ERG4/ERG24 family


Domain annotation for each model (and alignments):
>> ERG4_ERG24  Ergosterol biosynthesis ERG4/ERG24 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  574.6  22.1  6.4e-177  1.1e-172       2     432 .]      10     455 .]       9     455 .] 0.99

  Alignments for each domain:
  == domain 1  score: 574.6 bits;  conditional E-value: 6.4e-177
  ERG4_ERG24   2 eieyefggeigalgikiglpvlelylnaiskfealklllpksldlaelkneikeldllvfegaiwerklftvfllfyvlqavlylllpGkvveGleLs. 99 
                 ++++efgg++g++++++g+p +++yl+a ++ ++ ++l+p s++l  + +++++   ++  ga++++++ ++f+++++ + ++y++lpG++++Gl+L+ 
  EPX73145.1  10 RAHREFGGAKGVTAMMVGFPFVMYYLWASARYNDGQFLQPTSYTLSGICEFFRTFGGYIADGAYPSKYAIAIFWTYVITEGIFYVTLPGIRTRGLPLKh 108
                 5799*********************************************************************************************99 PP

  ERG4_ERG24 100 .ngkkLkYkinalaslllvlaillvlqvtelfeltvlidnfvqlisvailfafalaivlYvrslkvkerkkdkqlaaggvsGnliYDffiGreLnPRlg 197
                  n++ L+Y +na++s+++ + il+vl+ +++f++t++ d+f++l+svai+++f++++vlYv s+ + ++ +d    ++ +sGnliYD+f+G++LnPR+g
  EPX73145.1 109 rNNNSLPYLCNAVWSFYTSIIILAVLHLSNVFRITTILDQFGPLMSVAIISSFIITFVLYVGSILFGDKLFD---RPHALSGNLIYDYFMGASLNPRIG 204
                 999*********************************************************************...9*********************** PP

  ERG4_ERG24 198 .slDlkmFlelRlgllllllinlaallkqyklygkvtdslllvllaqllYvfdgvkneeavlttmDittdgFGFmLaFgdlvlvPftYslqtlYLsvh. 294
                   lDlkmF+e+R+++++l+++++a++++qy+ yg+v++++l+v++a++lY+++++k+ee++++t+D+++++FGFmL+F+++++vPftYs+++l+Ls   
  EPX73145.1 205 kLLDLKMFFEVRIPWFILFFLSVATAVRQYENYGYVSPQVLFVCFAHYLYANACAKGEELIVPTWDMAYEKFGFMLIFWNMAGVPFTYSHCALFLSARd 303
                 889**********************************************************************************************99 PP

  ERG4_ERG24 295 Pselgwst.vlvailvvlligyyiFrsansqknnFR...........tnPedpklkl..lkyiqtktGskLlvsGWyglarkinYlgDwlqslswsLat 379
                 P++++ws  ++  ++++l+++yy+F+s+nsqkn FR            +P++p++++  +++i++++G++Ll+sGWy++arki+Y+ D++qslsw+L+t
  EPX73145.1 304 PKQYEWSFsYNFFVYALLICCYYVFDSCNSQKNRFRnqiygltttrkSFPQLPWQTIknPTFIRCANGGTLLTSGWYRYARKIHYTVDFFQSLSWALIT 402
                 ******988*************************************99******98777**************************************** PP

  ERG4_ERG24 380 gfqsvlpyfyvlyFlvlLvhRelRDeekCkkkYGedweeYkkkvpykiipyvy 432
                 gf s+lpyfy+++F+++L+hR +RD ekCk+kYG+d++eY++++py +ipyv+
  EPX73145.1 403 GFSSPLPYFYPCFFIIVLIHRVTRDIEKCKAKYGADFNEYCRICPYLFIPYVF 455
                 ****************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (455 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       571  (0.0318478); expected 358.6 (0.02)
Passed bias filter:                      270  (0.0150594); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.46
# Mc/sec: 2976.76
//
Query:       EPX73146.1  [L=137]
Description: actin depolymerizing factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.1e-42  142.5   0.2    5.7e-42  142.3   0.2    1.0  1  Cofilin_ADF  Cofilin/tropomyosin-type actin-binding protein


Domain annotation for each model (and alignments):
>> Cofilin_ADF  Cofilin/tropomyosin-type actin-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.3   0.2   3.2e-46   5.7e-42       1     121 []      12     133 ..      12     133 .. 0.97

  Alignments for each domain:
  == domain 1  score: 142.3 bits;  conditional E-value: 3.2e-46
                  HHHHHHHHCTTT.SSEEEEEEECTTTEEEEEESS-..HHHHHHHHHHTTT-EEEEEEEEEECCSECCEEEEEEEEE--TTS-HHHHHHHHHHHHHHHH CS
  Cofilin_ADF   1 lkeafkelksgkktkyilfkidddkeeivveeege..tyeelreelpeseprYavydveyehddeskrsklvfIswvPdsapikqkmlyasskdalkk 96 
                  ++eaf+elk+gk+ +yi+fk++d k+ei+v+++++  +++ ++ elpe+++rYavyd+ey+  + + r+k+vfIsw+Pd +pik+km+y+sskd+l++
   EPX73146.1  12 CLEAFQELKLGKNLRYIVFKMNDAKTEIIVDKKSTdkDFDTFLGELPEQDCRYAVYDFEYNMGE-GLRNKIVFISWSPDVSPIKSKMVYSSSKDTLRR 108
                  89******************************66667************************997.9*************88***************** PP

                  HCTTSEEEEEE-CGGCCSHHHHHHH CS
  Cofilin_ADF  97 elkgisveieatdldelteeelkek 121
                  +++gi+ +i+ td +e+++e+++ek
   EPX73146.1 109 AFTGITTDIQGTDFSEVSHEAVLEK 133
                  **********************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       377  (0.0210274); expected 358.6 (0.02)
Passed bias filter:                      269  (0.0150036); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 993.37
//
Query:       EPX73147.1  [L=568]
Description: hypothetical protein SOCG_00903 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.2e-124  415.8   0.0   2.7e-124  415.5   0.0    1.0  1  UPF0061   Uncharacterized ACR, YdiU/UPF0061 family
  ------ inclusion threshold ------
       0.18   10.6   0.0       0.33    9.8   0.0    1.3  1  XRCC4     DNA double-strand break repair and V(D)J recombinat


Domain annotation for each model (and alignments):
>> UPF0061  Uncharacterized ACR, YdiU/UPF0061 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  415.5   0.0    3e-128  2.7e-124       7     466 ..      39     532 ..      34     534 .. 0.89

  Alignments for each domain:
  == domain 1  score: 415.5 bits;  conditional E-value: 3e-128
     UPF0061   7 yepaleslgsdfydeveaaefpkkilrvrndalleelgldeeevkdeelieifgke....kgiepflalrYhGyQFGeynpqLGDGRgfllgqvrdkd. 100
                 + p+ ++ g+ f + ++  ++++k l ++ ++ +++lgl+e+e++ e + ++  ++    +++ p+ ++ Y G+QFG +++qLGDGR++ l ++ + d 
  EPX73147.1  39 HMPRKVNGGALFTYVTPSMDAKSKLLGYSPSS-MKSLGLNESEAQTEAFQKLVVGKsidvDKCCPW-SQCYGGFQFGDWAGQLGDGRVVSLCELTNPDt 135
                 77888888888888888888888888888888.79****************99888899999****.***************************99886 PP

     UPF0061 101 gelydfglKGsGlTPySRsaDGrlvLksgvREvlasealhklgvrtsralslie.tgekllRedePspersavvvRlarshiRfGtferlkylkrldll 198
                 +e y++++KG G+TPySR+aDG++v +s++RE l++ealh+l+v+t+r+l + +  g +++Re   + e++a+v+R+a+s+iR+Gtf++  +  +ld +
  EPX73147.1 136 KERYEIQVKGIGRTPYSRFADGKAVVRSSIREHLCCEALHALNVPTTRSLAISTlDGVAAMRE---TIEPCAIVCRMAPSWIRIGTFDLPGVNGNLDSI 231
                 899*************************************************9989*******...********************************* PP

     UPF0061 199 kkLldyvieeyypeladee...ekyaqfyaelvervAelvAqWmaaGFchgVlNTDNmsilGeslDYGPyaFldkydpkftaayfDyagrYsyanQpsi 294
                 +kL+dy++++   +  + +   ++y+q+ +++  r+A++vA+W+ +GF++gVlNTDN+silG+s+D+GP++F+d+y+p+ft++++D   rYsy++Qps+
  EPX73147.1 232 RKLADYCLDHVLTKDFQGQglgNRYEQLLRDVAFRNAKCVAKWQVYGFMNGVLNTDNTSILGLSMDFGPFSFMDTYNPSFTPNHDDLFLRYSYERQPSV 330
                 **********888776665677***************************************************************************** PP

     UPF0061 295 ilwNLeqlaeplalli............................eaeeleealeeykevyttkYaqlmlkkLGleklsekekefdselleellelLqet 365
                 i wNL++la++l  +i                            + + +e+  +e+ ++ ++ Y qlm+++LGl + +++ k+     + + le+L++ 
  EPX73147.1 331 IIWNLAKLASALLEFIgakgqvddpqfmeklhstpellseahdyTLQVFENIAKEFLSIVREDYFQLMTARLGLPDDATARKQ-----VIDALEILENY 424
                 ***************999999988887777777666666666665666666666********************655555555.....77889****** PP

     UPF0061 366 qvdYneffveLaeskskkwrdeaesileese.kelee..........ekleeWrelYkklleeleedeleeraerlkkvNpktvllrplieeviekiae 453
                 ++dY +ff  L+++ ++   +++++ l +   ++++e           k++eW ++Y++l +e++   +++r +++k+vNp+++l+++++ee+ +k a 
  EPX73147.1 425 DLDYPNFFSFLTRNIEEAEGSSSAEQLFNFCiSSFNEknprfrneaiGKFQEWLDSYHQLCAEIP---KATRLNTMKSVNPHFTLRNWILEEINKK-AY 519
                 ***********99888776655555555544433444556777777799*************875...589999********************99.9* PP

     UPF0061 454 eddlsplkkllek 466
                 e d+++++k+ ++
  EPX73147.1 520 EGDYDLFHKVSKM 532
                 ********99877 PP

>> XRCC4  DNA double-strand break repair and V(D)J recombination protein XRCC4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0   3.7e-05      0.33     112     160 ..     215     263 ..     212     273 .. 0.93

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 3.7e-05
       XRCC4 112 kLGslkLqkveePaevirelisycLdqiaelqakNehLqkENerLlrdw 160
                 ++G+++L  v+   + ir+l  ycLd++  +  + + L +  e+Llrd 
  EPX73147.1 215 RIGTFDLPGVNGNLDSIRKLADYCLDHVLTKDFQGQGLGNRYEQLLRDV 263
                 89*******************************************9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (568 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       397  (0.0221429); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 3934.81
//
Query:       EPX73148.1  [L=287]
Description: checkpoint clamp complex protein Hus1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-91  305.6   0.2    3.3e-91  305.4   0.2    1.0  1  Hus1      Hus1-like protein


Domain annotation for each model (and alignments):
>> Hus1  Hus1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  305.4   0.2   1.8e-95   3.3e-91       1     291 [.       1     285 [.       1     286 [. 0.97

  Alignments for each domain:
  == domain 1  score: 305.4 bits;  conditional E-value: 1.8e-95
        Hus1   1 MkFkaqltdaetlkkvlqslsklgkecilrltpeklrfiiiteaddgvqvwaqlqvdaiFeeyeieSndeneInlevdlaaLlraLksaeaaksvqlrL 99 
                 M+Fk++++++ tl++++q+l+++gk+c+lrl pe++ fiii  + + +qvwa l+v++iFeey+++Sn+en+Inle+++++L++aL+sa++a++ ++rL
  EPX73148.1   1 MRFKTRISNLYTLTRLVQALDRIGKFCWLRLMPETVNFIIIP-DFRMTQVWAVLEVETIFEEYVVQSNAENVINLEIPVDNLYKALRSAANASDSTIRL 98 
                 *****************************************7.99****************************************************** PP

        Hus1 100 tkkgrvplLaleisglssreretvvthdiPvkvlseseveelkePelrdpdvsilLPdllqLkklvdkfkklssdlltlsankdGeLklvvetdlvrvs 198
                 +kk+++plL+l+++++     +++vth+iP++vls s v+ +keP+ ++pd++i++P+l+ L+++ dk+k++ sd++ +san++GeL+l+v+t +++v+
  EPX73148.1  99 SKKNNQPLLSLSTTWSGRAFGSNIVTHNIPIRVLSHSYVSAIKEPTAPEPDCHIFFPNLNILRQVADKYKNM-SDRVIISANMSGELQLSVSTPAAKVT 196
                 ************************************************************************.************************** PP

        Hus1 199 skwskLenpeldasqleqlesereaeeeeedaedeaeeakvrvdlkklarvlsvgelkpkkvvacivhetalvlyvlldd...eedvvltyyipav 291
                 ++w++Lenpeld+sq+      ++ +++ ++++++++++++r d+k+l ++l +  ++ ++v+ac+++++alvlyv+++d   e+++vltyyi+++
  EPX73148.1 197 TRWKDLENPELDPSQV------DDINRHPSQTRNPKDFVHMRLDAKDLVNMLRISTVA-RRVIACFCEGHALVLYVYITDpedEHTAVLTYYISTY 285
                 **************75......4455566677899******************99999.********************9999999*******987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (287 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       401  (0.022366); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2085.73
//
Query:       EPX73149.1  [L=695]
Description: PEK protein kinase Hri1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.4e-33  116.4   0.0    3.1e-19   69.4   0.0    2.3  2  Pkinase      Protein kinase domain
    8.5e-17   61.3   0.0      2e-09   37.2   0.0    2.3  2  Pkinase_Tyr  Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.7   0.0   1.2e-15     1e-11       1      69 [.     216     283 ..     216     313 .. 0.92
   2 !   69.4   0.0   3.4e-23   3.1e-19      73     264 .]     430     654 ..     422     654 .. 0.73

  Alignments for each domain:
  == domain 1  score: 44.7 bits;  conditional E-value: 1.2e-15
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEE CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfee 69 
                 +e+l+ lG+G++G Vyka++k +g  +A+Kki    ++ ++ ++++rE +il++l+hpn++r+y+++ e
  EPX73149.1 216 FEELKLLGKGGYGYVYKARNKFDGVDYALKKIPLTLRSLSS-SNMFRESRILARLNHPNVIRFYSSWVE 283
                 67899******************************988877.69********************99876 PP

  == domain 2  score: 69.4 bits;  conditional E-value: 3.4e-23
                 EEEEEE--TTEBHHHHHH.....HHSS--HHHHH...HHHHHHHHHHHHHH.HTTEE-SS-SGGGEEEET.........................TTE. CS
     Pkinase  73 lylvleyveggeladlle.....rkgslseeeak...kiakqilegleylH.skgiiHrDlKpeNiLide.........................kge. 136
                 ly+ + ++e++ l+ +l+      +g+l+++ ++    ++++ileg+ ylH  + ++H DlKp Ni++++                         + + 
  EPX73149.1 430 LYIQMALCEET-LEIHLNkrnkhFRGMLPKNLCNryiLLFSRILEGVMYLHnVMDLVHHDLKPRNIFLSSsasseqgsvrlpcftgksqlaneslE-Nk 526
                 56777777755.444444333244455666655511155789*********7788**************769999999999999998888766553.05 PP

                 ...EEE-SGTTSEESSSSCS......BCTTTSCGGGS-HHHH......TTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHC CS
     Pkinase 137 ...lKitDFGlakelesssk......ltsfvgtseYlAPEvl......keneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkil 220
                     Ki+DFGl+   +   +         f gt++Y APE+l      ++ + s+++Dv++lG++++ell    pf  + ++ +  ++          l
  EPX73149.1 527 ffvPKIGDFGLVLSQSDVGEsseengGYYFAGTHTYAAPEMLsrhmkaQAIKNSTAIDVYALGILFFELL---YPFGTRMERVSLINK----------L 612
                 7999*******977766555567888889*************9888444445599**************7...588833333333333..........3 PP

                 TSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 221 getkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 ++  +  +  ++++ ea +l+ ++l+  p kR+t++++l+ p +
  EPX73149.1 613 KKGILPEDFLEQMPGEA-SLILSMLS-SPAKRPTVAQILKTPIF 654
                 34455667777777776.67777875.699*********99876 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   1.1e-08   9.9e-05       4      72 ..     219     283 ..     216     289 .. 0.91
   2 !   37.2   0.0   2.2e-13     2e-09     102     256 ..     461     649 ..     420     651 .. 0.73

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 1.1e-08
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEES CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctk 72 
                   k lG+G +G V++++ k     + v+ a+K++  + ++ +++++++e +i+ +l+hpn+++++   ++
   EPX73149.1 219 LKLLGKGGYGYVYKARNK----FDGVDYALKKIPLTLRSLSSSNMFRESRILARLNHPNVIRFYSSWVE 283
                  578************999....899**************************************987665 PP

  == domain 2  score: 37.2 bits;  conditional E-value: 2.2e-13
                  HHHHHHHHHHHHHHHHHHHH.TTEEEST-SGGGEEEEE............................TTEEEE-STTTHEETTTSSEEEETTSST...S CS
  Pkinase_Tyr 102 lkdllsfalqvAkGmeyLes.kklvHrdlaarNvLlse............................nkvvkisDfGLardiekddeyvkkeeak...l 167
                  +++ + +   + +G+ yL++ ++lvH dl  rN++ls+                              v ki+DfGL  + ++  e ++++++     
   EPX73149.1 461 CNRYILLFSRILEGVMYLHNvMDLVHHDLKPRNIFLSSsasseqgsvrlpcftgksqlaneslenkFFVPKIGDFGLVLSQSDVGESSEENGGYyfaG 558
                  455666777899******98467**************99************************9533366*******988865555544444432225 PP

                  GGGGS-HHHHHHSE......EEHHHHHHHHHHHHHHHHTTSSGTT.TTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHH CS
  Pkinase_Tyr 168 pvkWmapEslkekk......ftsksDvWsfGvllwEiftlgespy.pglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfselv 256
                     + apE+l+++        +++ Dv++ G+l +E++     p+ ++++  ++++klk+g   e   +  +  ++l+  ++ ++p++Rpt ++++
   EPX73149.1 559 THTYAAPEMLSRHMkaqaikNSTAIDVYALGILFFELLY----PFgTRMERVSLINKLKKGILPEDFLEQMPGEASLI-LSMLSSPAKRPTVAQIL 649
                  78999*****98887888889999**************9....55145688888999988877655443333333333.34667899999998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (695 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       507  (0.0282782); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.26s 00:00:00.88 Elapsed: 00:00:00.45
# Mc/sec: 4633.22
//
Query:       EPX73150.1  [L=1354]
Description: formin Fus1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-72  244.5   4.2    1.9e-72  244.5   4.2    2.4  2  FH2       Formin Homology 2 Domain
    8.9e-37  126.5   2.5    8.9e-37  126.5   2.5    2.3  2  Drf_GBD   Diaphanous GTPase-binding Domain
    8.3e-07   28.8   3.1    8.3e-07   28.8   3.1    2.6  2  Drf_FH3   Diaphanous FH3 Domain
     0.0039   17.1   0.0      0.012   15.6   0.0    1.9  1  Drf_DAD   DRF Autoregulatory Domain
     0.0074   16.4   0.2      0.018   15.2   0.2    1.6  1  FtsJ      FtsJ-like methyltransferase
  ------ inclusion threshold ------
      0.074   13.2   1.6         29    4.9   0.0    4.5  4  PI_PP_I   Phosphoinositide phosphatase insertion domain
       0.11   12.6   3.5        3.9    7.6   0.2    3.7  3  IFS       Immunity factor for SPN


Domain annotation for each model (and alignments):
>> FH2  Formin Homology 2 Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.2      0.23   5.9e+02     271     350 ..     504     586 ..     492     607 .. 0.70
   2 !  244.5   4.2   7.4e-76   1.9e-72       5     372 .]     860    1241 ..     857    1241 .. 0.93

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.23
                 HHCCTS-HHHHHHHHHHHHHHHHHHHHH.HHHCCT...TSSTT-THHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHTT- CS
         FH2 271 kkaakvnleslekevkklekglkkleke.lessek...keepsdkflevlkeflkeaeeklkkleeelk.eakelvkelveYfge 350
                  +  +++ + l+ + ++  ++lk+++++ +e+s+    ++  + ++++v+ + ++e e+++++l++ ++ ++++ +++l+  f e
  EPX73150.1 504 HE--EMSTDRLSYNNDATDRNLKNTRTSrCEASSPnvmDAPAHGAISSVIGKSFQEMEKSYDNLKKAYEaDLTSIANSLITVFPE 586
                 44..788888888888888888888875255555588888888999999999999999999999887652455556666666655 PP

  == domain 2  score: 244.5 bits;  conditional E-value: 7.4e-76
                  ---SS-B------EESSGGCTTSCCCCTCCHHHHC......TSHHHHHHHHTBSC--HCCH......HCSCCTTCCESSS-HHHHHHHHHHHHHH.T CS
         FH2    5 ikpkkkLkplhWdkvkpsqdrstvWdklkeesfek......eldlseleelFsakekkkkkkksekskkskkkkkkvklLdpkrsqniaIlLkkl.k 94  
                  + p+k+Lk+lhW+ ++   +r+ +W++  ++ f        ++ l  le++F+++e+kk k         kk +    +++p++++ ++I L+++  
  EPX73150.1  860 YSPSKRLKQLHWKNLEVPVERT-LWNRPLADPFVLsikldcDGILGNLESCFAMREVKKFK---------KKNSSTDGFMPPDLQHYFGIRLHRFiY 946 
                  789*****************96.**********999*9*******************8444.........55677779******************* PP

                  S-HHHHHHHHHTTTTCCCT............HHHHHHHHHHCGGHHHHHHHHCTCTSGTTB-HHH.HHHHHHTT.STTHHHHHHHHHHHHTHHHHHH CS
         FH2   95 ltaeeiveaileldeeald............lellenLlkmaPtkeelkklkeykgevseLseae.qFllelvk.iprlekRleallfkstfeeeve 177 
                  l++ ei +++  +d+++++             + l++ l ++ t+ +  +   y  ++ eL+++e  ++l++++   ++ekR+++l+++  ++++ +
  EPX73150.1  947 LSPFEIASKFYYCDSDIMElidffvdrklfcQDSLKKNLSNFRTSWDNGEPT-YHMNLHELTKWEqVYVLTIIDiEGYYEKRMKSLKVMTVLDQSHR 1042
                  ******************9999999999888555554444444555555554.78899*******99*******999******************** PP

                  HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHSTCSTTCS-SEE-GGGGGGCCCSB-STTTSBHHHHHHHHHHTTSGGGGGHHHHTTTHHHCC CS
         FH2  178 elkrslealeaaseeLknskkfkklLeliLalGNymNdgtrrgqAkGFkLssLlkLsdvKstdnkttLLHylvkiireklpevldfsseLknvkkaa 274 
                  +l++++++++++   +k+s +fk lL+liL lGNymNd    +q +GFk++sL++Ls +K+++n +tLLH++++i+r+ +pe+++f  +L+nv+++ 
  EPX73150.1 1043 DLQKQIRKIHCTLLDIKTSTNFKYLLNLILLLGNYMNDVP--RQKQGFKIDSLQRLSVIKNEENGLTLLHTFESIVRKSFPELEEFLRDLTNVPEVV 1137
                  **************************************88..899**************************************************** PP

                  TS-HHHHHHHHHHHHHHHHHHHHHHHHCCT.....TSSTT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TT.CCHHHHHHHHHH CS
         FH2  275 kvnleslekevkklekglkklekelessek.....keepsdkflevlkeflkeaeeklkkleeelkeakelvkelveYfgedkk.evspeeffkilr 365 
                  kvnle+le+++  +e+ + ++e++++++ +       +p+d+++ev+ +++++a+   +kl+++l ++ke+++ ++ +fge+++  +s   ff+ l+
  EPX73150.1 1138 KVNLEQLEHDCLSIEQLVNEVEEDFSENGTiseqtVLHPNDRIREVIAPWIPSAKAITAKLKSDLMSMKEAFECTLTMFGENSDsLASGSYFFESLN 1234
                  ****************************999999999*********************************************9988999******** PP

                  HHHHHHH CS
         FH2  366 eFlkefk 372 
                  +Flke++
  EPX73150.1 1235 DFLKEYN 1241
                  *****95 PP

>> Drf_GBD  Diaphanous GTPase-binding Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.5   2.5   3.5e-40   8.9e-37       4     188 .]     106     296 ..     103     296 .. 0.96
   2 ?   -1.8   0.4      0.74   1.9e+03      21      59 ..    1249    1290 ..    1234    1329 .. 0.71

  Alignments for each domain:
  == domain 1  score: 126.5 bits;  conditional E-value: 3.5e-40
     Drf_GBD   4 p.deeeidklFeelleelnlpeekr......eallalpiekKwqlvvqdkkkkakkeeklsksksksneeespesyvkklkddslkekqlesLrVaLrt 95 
                 p d++ +d+lF e+++ l+ ++++       ++ ++l++e+Kw +++ +  kk+k   +++ ++s+   +  + sy++kl ++  k+k +esL VaLrt
  EPX73150.1 106 PnDPNLVDELFLEVVTTLKKENQETyssffyDPKVTLSMENKWAFITNYLVKKDKVL-AIKCNESETATKCAVASYIEKLLEKMPKSKHVESLVVALRT 203
                 55899*************87777777889999*******************999999.9999************************************* PP

     Drf_GBD  96 qplsWvkrFieleGlvaLlnvLskinekkaeeeedlkkeyeiikClKalmNnkvGldavlahksvikllaqsldserlktrklvlelLtalcl 188
                 ++++Wv++F+ ++G+ +Ll +L   ++  ++   d++ e++++kC+++lmN + G+ +++ + ++i+ + q+l++++l++rk+ +e+Lt+lc+
  EPX73150.1 204 ESVTWVRTFLMMDGQDLLLRILDDFHDLRSSRILDANLELAVLKCIRCLMNHEEGISFYIDKGHMIQPVLQCLLTSKLSVRKTSAEILTFLCY 296
                 ********************************************************************************************6 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.74
     Drf_GBD   21 nlpeekr...eallalpiekKwqlvvqdkkkkakkeeklsks 59  
                  + +ee+r     l al+++ K++l+++  + + k+e ++ ++
  EPX73150.1 1249 KFEEEERiahVRLKALEATGKKELMQSTLQETTKEESAVMDN 1290
                  555565544445677888888888888888888887443333 PP

>> Drf_FH3  Diaphanous FH3 Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.8   3.1   3.3e-10   8.3e-07      19     133 ..     337     463 ..     328     529 .. 0.72
   2 ?   -1.8   1.2      0.76     2e+03     102     147 ..    1235    1280 ..    1227    1296 .. 0.81

  Alignments for each domain:
  == domain 1  score: 28.8 bits;  conditional E-value: 3.3e-10
                 -SSTTHHHHHHHHH........HSS-HHHHHHHHHHHHHHHHSSSSHHHHHHHHHHHHCTTHHHHHHHHCTSCSHHHHHHHHHHH...HHHHHHHHHHH CS
     Drf_FH3  19 ergrfrslvgaldel.......enelveykvatmllInalvnspedlqfRlhLRseflalGLdkiidklreleneeLddqlqafe...eerneDeeell 107
                 +rg+ +slvga ++        ++  +ey+v+ mllIna++++ +  +   +  + ++    ++i++k+++l+n+++++q+q++    e+++ D++ ++
  EPX73150.1 337 NRGKLGSLVGAGKDAreegvryNQMVLEYCVSQMLLINAFLENFTTRETLYQFNQTIKDSRFQRILKKMSTLRNPDIEKQVQKYYyvvENAFTDFKNVS 435
                 38999******9999999***99999******************999999999999****************************733356666666666 PP

                 HHHT..XXXXXXXXXXXXXXXXXXXXXX CS
     Drf_FH3 108 erae..dktvdlddpeelfellknkvkd 133
                 +  +  +  ++l d+++l +llk+ +k+
  EPX73150.1 436 NERDlgSSVLKLFDNDDLNSLLKQFLKH 463
                 6666995555555555555555444433 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.76
                  HHHHHHHHHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
     Drf_FH3  102 Deeelleraedktvdlddpeelfellknkvkdteaepyllsilqhl 147 
                  D+ +  +++++ ++++++ e++ +   + +++t+ + ++ s+lq+ 
  EPX73150.1 1235 DFLKEYNKVKQTNLKFEEEERIAHVRLKALEATGKKELMQSTLQET 1280
                  555555666699999999999999999999*********9999986 PP

>> Drf_DAD  DRF Autoregulatory Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   4.7e-06     0.012       2      14 ..    1287    1299 ..    1286    1300 .. 0.96

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 4.7e-06
     Drf_DAD    2 VMDsLLEALqsGk 14  
                  VMD+LLE L sGk
  EPX73150.1 1287 VMDNLLEKLKSGK 1299
                  9***********8 PP

>> FtsJ  FtsJ-like methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.2   6.8e-06     0.018      64     163 ..     374     476 ..     350     489 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 6.8e-06
                 EEECS-CCCSSHHHHHCHCHHHSSEEEEEE--S-..SS-CHHHHHHHHHCCCCHHHHCCHCCCCECC..CEEEECCCHCCCHHHHHHH.HHCCEEEEEE CS
        FtsJ  64 ttiqgditdpetiekikealserkvdlvvsDgap..dvsgvhdldeylqsqLllaalelalkllkpg..gtfvlkifrgeeteallkq.lkkfFekvsv 157
                 + +  ++t+ et  ++++++++++++ ++  ++   +    +++++y     +++a++   ++ ++   g+ vlk+f++++ ++llkq lk+fF+ v+ 
  EPX73150.1 374 NAFLENFTTRETLYQFNQTIKDSRFQRILKKMSTlrNPDIEKQVQKYY--YVVENAFTDFKNVSNERdlGSSVLKLFDNDDLNSLLKQfLKHFFKLVKT 470
                 455789999999999999999999999999999422333334444444..467777776555544434599*****************9*********9 PP

                 EE-SS- CS
        FtsJ 158 vkPkss 163
                  k +s 
  EPX73150.1 471 NKAPSR 476
                 998876 PP

>> PI_PP_I  Phosphoinositide phosphatase insertion domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.039     1e+02      33      87 ..     555     607 ..     542     617 .. 0.77
   2 ?   -0.9   0.1      0.72   1.8e+03      18      49 ..     960    1002 ..     951    1013 .. 0.69
   3 ?   -2.6   0.0       2.4   6.2e+03       7      58 ..    1005    1059 ..    1001    1064 .. 0.48
   4 ?    4.9   0.0     0.011        29      29      53 ..    1229    1253 ..    1187    1264 .. 0.82

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.039
                 HHHHHHHHHHHHHH-SSHHHHHHHHHCT-.SS--HHHHTS-HHHHHHHHHHT.T.. CS
     PI_PP_I  33 lnqfllkWeeikktslsLeedLnkiannk.tplPsWfnelskaqqellrvlaeakl 87 
                 ++++ ++++++kk     e+dL++ian   t +P+ f+ l+ ++ +++ +l e  +
  EPX73150.1 555 FQEMEKSYDNLKKAY---EADLTSIANSLiTVFPEKFSFLHGKESKVVSILKEMAM 607
                 555555666666544...89******986368*****************9997654 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.72
                  C..........--TT--SHHHHHHHHHHHHHHHHHHH.HH-SS CS
     PI_PP_I   18 n..........leskeaslkklkqdlnqfllkWeeik.ktsls 49  
                             +++k     +lk++l +f ++W++ + +  ++
  EPX73150.1  960 DsdimelidffVDRKLFCQDSLKKNLSNFRTSWDNGEpTYHMN 1002
                  555555555555666667789999*********9876444444 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 2.4
                  CS-HHHHHHHHC...--TT--SHHHHHHH...HHHHHHHHHHHHHH-SSHHHHHHHHH CS
     PI_PP_I    7 kLeeyqqaYfln...leskeaslkklkqd...lnqfllkWeeikktslsLeedLnkia 58  
                  +L+++ q+Y l+   +   e  ++k +++   +  + ++ ++++k+  +++  L +i+
  EPX73150.1 1005 ELTKWEQVYVLTiidI---EGYYEKRMKSlkvMTVLDQSHRDLQKQIRKIHCTLLDIK 1059
                  6778888887774331...222222222200033344455555555555555555555 PP

  == domain 4  score: 4.9 bits;  conditional E-value: 0.011
                  HHHHHHHHHHHHHHHHHH-SSHHHH CS
     PI_PP_I   29 lkqdlnqfllkWeeikktslsLeed 53  
                     +ln+fl++++++k+t+l++ee+
  EPX73150.1 1229 FFESLNDFLKEYNKVKQTNLKFEEE 1253
                  4578****************99987 PP

>> IFS  Immunity factor for SPN
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0     0.044   1.1e+02      96     129 ..     246     277 ..     218     300 .. 0.72
   2 ?   -0.3   0.2       0.4     1e+03      71     109 ..     396     434 ..     385     473 .. 0.78
   3 ?    7.6   0.2    0.0015       3.9      70     144 ..     595     669 ..     557     685 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.044
         IFS  96 insqnllleeyeslpFiidteelvsniiesiskL 129
                 ++    l+++ e ++F+id+ ++++ +++ +  L
  EPX73150.1 246 LKCIRCLMNHEEGISFYIDKGHMIQPVLQCL--L 277
                 5555678899999**************9982..2 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.4
         IFS  71 erteeiLkelslSkdlvklyqvvsyinsqnllleeyesl 109
                 +r ++iLk++s+ +++   +qv +y    ++  + ++++
  EPX73150.1 396 SRFQRILKKMSTLRNPDIEKQVQKYYYVVENAFTDFKNV 434
                 467889999999888877778888777666666666655 PP

  == domain 3  score: 7.6 bits;  conditional E-value: 0.0015
         IFS  70 kerteeiLkelslSkdlvklyqvvsyinsqnllleeyeslpFiidteelvsniiesiskLsdekkrekmkealvg 144
                 ++++  iLke+++  ++ k +   +  n+ +  l+e e+l + ++t++l ++ +  i++L+++kk  + +  +++
  EPX73150.1 595 ESKVVSILKEMAMEGNAEKFKSTYEGFNNTSEPLQEQEALNYPLETDRLNKKDLGLIDNLAKQKKEPSNYCGILN 669
                 46899*********************************************9999999999999888777766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1354 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1212  (0.0676); expected 358.6 (0.02)
Passed bias filter:                      569  (0.0317363); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.90u 0.28s 00:00:01.18 Elapsed: 00:00:00.44
# Mc/sec: 9146.96
//
Query:       EPX73151.1  [L=281]
Description: CCR4-Not complex subunit Caf16 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.2e-18   66.6   0.0    1.8e-17   64.2   0.0    2.2  2  ABC_tran      ABC transporter
    1.2e-11   45.0   1.5    6.6e-05   22.9   0.1    2.3  2  AAA_21        AAA domain, putative AbiEii toxin, Type IV TA s
    2.3e-06   27.4   0.2    3.4e-06   26.8   0.2    1.4  1  AAA_25        AAA domain
    0.00016   21.4   0.1    0.00036   20.2   0.1    1.6  1  AAA_29        P-loop containing region of AAA domain
    0.00086   19.2   0.0     0.0016   18.4   0.0    1.4  1  RsgA_GTPase   RsgA GTPase
     0.0024   17.5   0.0     0.0035   17.0   0.0    1.2  1  SRP54         SRP54-type protein, GTPase domain
     0.0031   18.1   0.0     0.0051   17.3   0.0    1.4  1  AAA_23        AAA domain
     0.0046   16.4   0.0          1    8.7   0.0    2.2  2  SMC_N         RecF/RecN/SMC N terminal domain
     0.0048   17.0   0.3      0.021   14.9   0.1    2.0  2  MMR_HSR1      50S ribosome-binding GTPase
     0.0061   17.0   1.5      0.011   16.2   1.0    1.9  1  AAA_16        AAA ATPase domain
     0.0062   15.8   0.0       0.01   15.1   0.0    1.2  1  Zeta_toxin    Zeta toxin
  ------ inclusion threshold ------
      0.013   15.2   0.0      0.023   14.4   0.0    1.3  1  AAA_15        AAA ATPase domain
      0.028   14.2   0.6        3.3    7.4   0.1    2.3  2  AAA_24        AAA domain
      0.034   11.7   0.3      0.048   11.2   0.3    1.1  1  DUF3584       Protein of unknown function (DUF3584)
      0.036   14.5   0.4       0.64   10.4   0.2    2.7  2  AAA           ATPase family associated with various cellular 
      0.038   13.3   0.1       0.37   10.1   0.1    2.1  2  FtsK_SpoIIIE  FtsK/SpoIIIE family
      0.039   14.2   0.0      0.076   13.3   0.0    1.5  1  AAA_28        AAA domain
        0.1   12.9   0.2        0.3   11.4   0.0    1.8  2  AAA_22        AAA domain
        0.1   12.4   0.0       0.17   11.6   0.0    1.4  1  CLP1_P        mRNA cleavage and polyadenylation factor CLP1 P
       0.12   12.3   0.1        1.1    9.3   0.0    2.2  2  AAA_5         AAA domain (dynein-related subfamily)
       0.15   11.0   0.0       0.25   10.3   0.0    1.3  1  MeaB          Methylmalonyl Co-A mutase-associated GTPase Mea
       0.18   12.0   1.4       0.24   11.6   0.2    1.8  2  AAA_33        AAA domain
        0.2   11.4   0.0       0.32   10.7   0.0    1.3  1  AAA_30        AAA domain


Domain annotation for each model (and alignments):
>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.2   0.0   2.3e-20   1.8e-17       1     136 [.      21     157 ..      21     158 .. 0.75
   2 ?   -1.4   0.0         4   3.1e+03      27      67 ..     168     206 ..     165     267 .. 0.51

  Alignments for each domain:
  == domain 1  score: 64.2 bits;  conditional E-value: 2.3e-20
                 EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHHHHHTCHHHHHHHSTTGG... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx... RF
    ABC_tran   1 lknvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvrenesdeeiekalsklglke... 96 
                 l++vsl+l +g+++ +vG nGaGKStLl+llag++  ++G++ + g+d  +    ++++ + +l  e   +p +     ++d +++++++++g +    
  EPX73151.1  21 LDHVSLNLPRGSRTLLVGANGAGKSTLLRLLAGKSLAKAGKVSVFGNDPFR----ESKSTVVYLGTEWVNNPVV-----HRDMNVARLIASVGGDLfpe 110
                 789***************************************998776655....7888888888884444444.....33444444444444333333 PP

                 .......TTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTT CS
                 .......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  97 .......lkdtvvksspssLSgGqkqrvalarallkkpkllllDEpt 136
                        + d  ++ +++ +S G+++rv+l++ ll+  ++lllDE t
  EPX73151.1 111 rrdmlisILDVDLRWRMHAVSDGERRRVQLCMGLLRPFDVLLLDEVT 157
                 344333333333444559***************************88 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 4
                 HHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  27 LlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqe 67 
                 Ll+ l+ +++  + +i +  + ++   l ++  ++  ++q 
  EPX73151.1 168 LLSFLSSETESRNATIVYATHIFDG--LAKWPTHLVHVSQG 206
                 5555555555555555444333333..44444444444443 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.2   2.6e-07    0.0002       2      21 ..      34      53 ..      33      82 .. 0.74
   2 !   22.9   0.1   8.4e-08   6.6e-05     229     297 ..     122     188 ..      90     189 .. 0.88

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 2.6e-07
      AAA_21  2 nvliGpNgsGKSnLLdaldl 21
                ++l+G+Ng+GKS+LL++l +
  EPX73151.1 34 TLLVGANGAGKSTLLRLLAG 53
                79****************65 PP

  == domain 2  score: 22.9 bits;  conditional E-value: 8.4e-08
      AAA_21 229 gqelparelSdGtkrllalltallralkkgsllliDEpEngLHPkllrrllellkelsr.ngaQviltTH 297
                 +  + ++ +SdG +r   l   llr     ++ll+DE+   L+  + + ll +l+++++ ++a ++ +TH
  EPX73151.1 122 DLRWRMHAVSDGERRRVQLCMGLLRPF---DVLLLDEVTVDLDVLARSDLLSFLSSETEsRNATIVYATH 188
                 55678999****************977...************************6666669********* PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.2   4.4e-09   3.4e-06      30      91 ..      28      95 ..       5     165 .. 0.84

  Alignments for each domain:
  == domain 1  score: 26.8 bits;  conditional E-value: 4.4e-09
      AAA_25 30 lpagelallaGapgtGKttlaldlalava...tGkpwlg..pvapeqgkVlyvsaEdsed.elrrRlr 91
                lp+g+ +ll+Ga g+GK+tl+  la + +      +++g  p++  + +V+y+ +E  ++  ++r + 
  EPX73151.1 28 LPRGSRTLLVGANGAGKSTLLRLLAGKSLakaGKVSVFGndPFRESKSTVVYLGTEWVNNpVVHRDMN 95
                69******************9999876655658889999*****************775435565555 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.1   4.6e-07   0.00036      16      39 ..      25      48 ..      20      57 .. 0.80

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 4.6e-07
      AAA_29 16 tieidlkg.atlltGpsGsGKSTll 39
                ++++  +g  tll+G++G+GKSTll
  EPX73151.1 25 SLNLP-RGsRTLLVGANGAGKSTLL 48
                55565.4559**************8 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0     2e-06    0.0016      93     131 ..      24      63 ..       7      68 .. 0.83

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 2e-06
                  HHHHCTT.SEEEEECSTTSSHHHHHHHHCTT-----S--- CS
  RsgA_GTPase  93 lkellkd.ktsvlvGqSGvGKStLinallpelelktgevs 131
                  ++ +l   + ++lvG  G+GKStL+  l+++  +k g+vs
   EPX73151.1  24 VSLNLPRgSRTLLVGANGAGKSTLLRLLAGKSLAKAGKVS 63 
                  55555444889********************999999998 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   4.5e-06    0.0035       4      43 ..      34      73 ..      32     103 .. 0.91

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 4.5e-06
                EEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEEESTSSTT CS
       SRP54  4 illvGlqGaGKTttlaKLaallkkegkkvllvaaDtfRaa 43
                +llvG +GaGK t l  La +  +++ kv +   D fR +
  EPX73151.1 34 TLLVGANGAGKSTLLRLLAGKSLAKAGKVSVFGNDPFRES 73
                69************************************75 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   6.6e-06    0.0051      22      39 ..      34      51 ..      19      95 .. 0.86

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 6.6e-06
      AAA_23 22 tlItGpNGaGKTTildAi 39
                tl++G NGaGK+T+l+ +
  EPX73151.1 34 TLLVGANGAGKSTLLRLL 51
                9**************876 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.0    0.0013         1      25      41 ..      32      48 ..      20      55 .. 0.83
   2 ?    5.6   0.0     0.012       9.2     156     190 ..     145     179 ..     122     206 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0013
                SEEEEEESTTSSHHHHH CS
                xxxxxxxxxxxxxxxxx RF
       SMC_N 25 sftaivGpNGSGKsnll 41
                s t +vG+NG+GKs ll
  EPX73151.1 32 SRTLLVGANGAGKSTLL 48
                46899*********987 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.012
                 CS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 156 vkpaplyllDeidaaLDeknvkkvaellkekskna 190
                  +p  + llDe+   LD   ++ + ++l +++++ 
  EPX73151.1 145 LRPFDVLLLDEVTVDLDVLARSDLLSFLSSETESR 179
                 57778899********************9877653 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.1   2.7e-05     0.021       3      29 ..      35      62 ..      33      86 .. 0.84
   2 ?   -0.7   0.0       1.9   1.5e+03       8      20 ..     224     236 ..     223     268 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 2.7e-05
                EEEESTTSSHHHHHHHHHTS.TEEESSS CS
    MMR_HSR1  3 aivGrpNvGKStLinaltge.kaivsdk 29
                ++vG   +GKStL++ l g+  a++++ 
  EPX73151.1 35 LLVGANGAGKSTLLRLLAGKsLAKAGKV 62
                79****************9866776665 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 1.9
                 TTSSHHHHHHHHH CS
    MMR_HSR1   8 pNvGKStLinalt 20 
                 +N+G S+L+ + +
  EPX73151.1 224 SNTGNSSLLETCL 236
                 7999999998765 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   1.0   1.4e-05     0.011      22      57 ..      29      64 ..      21     184 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.4e-05
      AAA_16 22 grpelvllsGesGvGKsslvrell.ralekdggiflr 57
                +r++ +ll+G+ G GKs+l+r l+ ++l k+ g +  
  EPX73151.1 29 PRGSRTLLVGANGAGKSTLLRLLAgKSLAKA-GKVSV 64
                456789*****************95566666.33322 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   1.3e-05      0.01      20      56 ..      35      72 ..      29      79 .. 0.88

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.3e-05
  Zeta_toxin 20 llgGqpGAGKselaellkdele.rqgnvvrldpDdlRe 56
                ll+G+ GAGKs+l++ll+ +   ++g+v ++  D +Re
  EPX73151.1 35 LLVGANGAGKSTLLRLLAGKSLaKAGKVSVFGNDPFRE 72
                89**************9977555999999999999998 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0     3e-05     0.023      16      43 ..      23      51 ..      20      68 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 3e-05
      AAA_15 16 dveidlsee.ltvliGkNnsGKSsileal 43
                +v+++l     t+l+G+N++GKS++l++l
  EPX73151.1 23 HVSLNLPRGsRTLLVGANGAGKSTLLRLL 51
                555555555579**************998 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.1    0.0042       3.3       3      22 ..      32      51 ..      30      67 .. 0.85
   2 ?    4.9   0.0     0.024        19      77     112 ..     231     265 ..     228     272 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0042
      AAA_24  3 lkiliyGpsgiGKTtlakel 22
                 + l++G +g+GK+tl++ l
  EPX73151.1 32 SRTLLVGANGAGKSTLLRLL 51
                5789************9987 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.024
      AAA_24  77 leelclaevirqnekaeskedkgdgkGygelaeefr 112
                 l e cla++++ +++  s+ed ++ + ++++++ f+
  EPX73151.1 231 LLETCLAWIKEDKRIRGSREDEKR-NTWQDVQDTFK 265
                 7899***********777777555.89*****9986 PP

>> DUF3584  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.3   6.2e-05     0.048      19      37 ..      33      51 ..      26      52 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 6.2e-05
     DUF3584 19 htnieGtNaaGKTtLlrLi 37
                +t ++G+N+aGK tLlrL+
  EPX73151.1 33 RTLLVGANGAGKSTLLRLL 51
                899***************7 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.2   0.00082      0.64       2      23 ..      35      61 ..      34     200 .. 0.67
   2 ?    0.6   0.0      0.91   7.1e+02      25      96 ..     199     271 ..     186     276 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00082
                EEESSTTSSHHHHHHHHHHHH.....T CS
         AAA  2 llyGppGtGKTllakavakel.....g 23
                ll+G  G GK++l + +a ++     +
  EPX73151.1 35 LLVGANGAGKSTLLRLLAGKSlakagK 61
                89****************996333321 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.91
                 EEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTS.TSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHT CS
         AAA  25 efleisgsellskyvgesekkirelfkeakeka.kpsilfiDEidalaksrsgseseeeervvnqLlteldgv 96 
                 +++ +s  +++++   ++  +i+ + ++  ++  +++  +i E  ++ +sr++++++  ++v++++ t  d +
  EPX73151.1 199 HLVHVSQGKIVNSGPVAKFPEIQSVSNTGNSSLlETCLAWIKEDKRIRGSREDEKRNTWQDVQDTFKTGTDVF 271
                 6677777777777777777778888877666667789999999999999998888888888888887766655 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.1   0.00047      0.37      39      59 ..      27      51 ..      15      69 .. 0.79
   2 ?    0.9   0.0      0.32   2.5e+02       6      39 ..      65      97 ..      62     105 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00047
                  -.....SEEEE--TTSSHHHHHHHH CS
  FtsK_SpoIIIE 39 a....shllvaGatgsGKStalntL 59
                       s +l++Ga g GKSt l+ L
    EPX73151.1 27 NlprgSRTLLVGANGAGKSTLLRLL 51
                  34455689**************976 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.32
                  HTSHHHHT---TTEEEEEEETTS-EEEEEGGGS- CS
  FtsK_SpoIIIE  6 leskkfrtessqlpvalgkeisgnplvldlkkma 39
                  + + +fr es++  v lg e+++np+v+   ++a
    EPX73151.1 65 FGNDPFR-ESKSTVVYLGTEWVNNPVVHRDMNVA 97
                  5666777.67778899**********99776666 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   9.7e-05     0.076       3      27 ..      35      65 ..      33      89 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 9.7e-05
      AAA_28  3 vitGgestGKTtlleaLa....ar..gypvv 27
                 ++G+ ++GK+tll+ La    a+  +++v+
  EPX73151.1 35 LLVGANGAGKSTLLRLLAgkslAKagKVSVF 65
                689**************95444224345555 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00038       0.3       8      29 ..      34      55 ..      30     100 .. 0.83
   2 ?   -1.8   0.1       4.4   3.4e+03      93     113 ..     149     173 ..     112     186 .. 0.69

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00038
      AAA_22  8 lvvtGesGtGKTtllrrlleql 29
                ++++G  G+GK+tllr l+ + 
  EPX73151.1 34 TLLVGANGAGKSTLLRLLAGKS 55
                689*************998765 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 4.4
      AAA_22  93 elliiDEaqh.lr...seealeeLr 113
                  +l++DE+   l+   + ++l++L+
  EPX73151.1 149 DVLLLDEVTVdLDvlaRSDLLSFLS 173
                 4888888766665554466666664 PP

>> CLP1_P  mRNA cleavage and polyadenylation factor CLP1 P-loop
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00022      0.17       1      52 [.      38      89 ..      38     116 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00022
      CLP1_P  1 GpkdsGKSTlarlLlNyalrkgrkpvyvDlDvGqseispPgtislalverpi 52
                G++ +GKSTl rlL+ + l k  k+ +   D+   + s+  +++   v++p+
  EPX73151.1 38 GANGAGKSTLLRLLAGKSLAKAGKVSVFGNDPFRESKSTVVYLGTEWVNNPV 89
                7899********************9999999988888888888888888877 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.0    0.0014       1.1       3      21 ..      35      53 ..      33      95 .. 0.87
   2 ?    0.7   0.0      0.61   4.8e+02      41      83 ..     123     164 ..     117     186 .. 0.69

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.0014
                EEE--SSSSHHHHHHHGGG CS
       AAA_5  3 lLvGppGtgKselaerlaa 21
                lLvG+ G gKs+l + la 
  EPX73151.1 35 LLVGANGAGKSTLLRLLAG 53
                9**************9986 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.61
                 HH--B--..........--------G-SEEEEESGGG--HHHHH CS
       AAA_5  41 lkgrreik.ngttslvdsplvraaregeilvlDEveraesevln 83 
                 l++r++   +g++++v+ ++    r  ++l+lDEv+ ++ +vl+
  EPX73151.1 123 LRWRMHAVsDGERRRVQLCMG-LLRPFDVLLLDEVT-VDLDVLA 164
                 555555444555555555555.8889999*****99.6666665 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00032      0.25      28      68 ..      30      70 ..      16      82 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00032
                -SEEEEEEE-TTSSHHHHHHHHHHHHHCTT--EEEEEE--- CS
        MeaB 28 raqvvGltGvPGaGkstlvealglelrrrGkrvavlavDPs 68
                r  +  l G  GaGkstl+  l+ +  ++  +v+v   DP 
  EPX73151.1 30 RGSRTLLVGANGAGKSTLLRLLAGKSLAKAGKVSVFGNDPF 70
                5566678899***********98777777779***999995 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.2    0.0003      0.24       3      22 ..      35      54 ..      34      68 .. 0.89
   2 ?   -2.4   0.1       6.3   4.9e+03     109     141 ..     233     265 ..     232     266 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.0003
      AAA_33  3 llvGlpGsGKstlaerllkk 22
                llvG++G+GKstl++ l+ k
  EPX73151.1 35 LLVGANGAGKSTLLRLLAGK 54
                79************998765 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 6.3
      AAA_33 109 etlkeRlakRaangddrsevpeealdrqkarfe 141
                 et+ +++++ ++ +++r + ++ ++++ +++f+
  EPX73151.1 233 ETCLAWIKEDKRIRGSREDEKRNTWQDVQDTFK 265
                 677777777777778888888888888888775 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00041      0.32      21      49 ..      34      62 ..      27     101 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00041
      AAA_30 21 avltGpAGtGKttalkalreaweaaggrv 49
                ++l+G+ G+GK+t+l+ l+    a+ g+v
  EPX73151.1 34 TLLVGANGAGKSTLLRLLAGKSLAKAGKV 62
                689**************965554443344 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (281 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       405  (0.0225891); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        87  (0.00485247); expected 17.9 (0.001)
Passed Fwd filter:                        23  (0.00128284); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              23  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 1900.38
//
Query:       EPX73152.1  [L=896]
Description: phosphoinositide phospholipase C Plc1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.4e-61  204.0   0.0    1.6e-60  202.9   0.0    1.6  1  PI-PLC-X      Phosphatidylinositol-specific phospholipase C, 
    2.9e-36  124.3   0.0    8.1e-36  122.9   0.0    1.8  1  PI-PLC-Y      Phosphatidylinositol-specific phospholipase C, 
    3.7e-09   36.8   0.0      3e-08   33.9   0.0    2.4  2  C2            C2 domain
    1.4e-06   28.7   0.2    5.5e-06   26.8   0.2    2.1  1  EF-hand_like  Phosphoinositide-specific phospholipase C, efha
     0.0011   18.8   1.9        1.5    9.0   0.1    3.1  3  EF-hand_6     EF-hand domain
     0.0013   19.2   0.4      0.033   14.7   0.0    2.5  2  EF-hand_7     EF-hand domain pair
     0.0059   16.4   0.3      0.018   14.9   0.3    1.9  1  EF-hand_10    EF hand
  ------ inclusion threshold ------
      0.064   13.1   0.0       0.17   11.7   0.0    1.8  1  EF-hand_8     EF-hand domain pair


Domain annotation for each model (and alignments):
>> PI-PLC-X  Phosphatidylinositol-specific phospholipase C, X domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  202.9   0.0   7.2e-64   1.6e-60       1     144 [.     436     577 ..     436     578 .. 0.99

  Alignments for each domain:
  == domain 1  score: 202.9 bits;  conditional E-value: 7.2e-64
                 SEEEEETTTTTTS-SHHHHHTHHHH---SS-HHHHHHTT--EEEEEE-...TT.SEEEETTEEE.EEEHHHHHHHHHHHHHHSTT--EEEEEEETTT-T CS
    PI-PLC-X   1 lsaPlshyfissshntyltgnqlssessveayrnaLlrGcRcvEidvwdgedeepvvlhgytltkkikfrdvleaikdyafktselPvivsLevhcsae 99 
                 +++Pl++y issshntyl g+q+ +ess+e y++ L+rGc+c+Eid+wdg+d+ pvv+hg+t+t+ i f+dv++ ik+yaf+ s +Pvi+sLe hc++e
  EPX73152.1 436 MNRPLNEYIISSSHNTYLLGKQFAGESSIEGYIRSLQRGCKCIEIDCWDGSDG-PVVCHGRTFTSMIRFNDVIDVIKKYAFVVSAYPVIISLEIHCCPE 533
                 899**************************************************.********************************************* PP

                 HHHHHHHHHHHHGGGGB-EEETT-.------BCCCCTT-EEEEE. CS
    PI-PLC-X 100 qqekmaeilkeifgdlLleeplekeeskelpspeelkgKilikvk 144
                 qq++ma+++k++fg++Ll+epl    +++lpspe+l  Kil+kvk
  EPX73152.1 534 QQRQMADYMKQTFGSNLLTEPLGP-FETSLPSPEQLLYKILVKVK 577
                 ***********************7.89*****************9 PP

>> PI-PLC-Y  Phosphatidylinositol-specific phospholipase C, Y domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.9   0.0   3.6e-39   8.1e-36       2     114 ..     632     743 ..     631     744 .. 0.94

  Alignments for each domain:
  == domain 1  score: 122.9 bits;  conditional E-value: 3.6e-39
    PI-PLC-Y   2 sdlvvytqsvkfksfekpeakkpnhvfslsesklkkllekeeekklvkhnrrhlmRvyPkgtrvdssNlnpvefWnvGvqmvAlnwqtldegmqlneal 100
                 ++++ y++s kf++f+ pe+k++nh+fs+se+++k++  k+   +l khn ++l+RvyP  +r+ s+Nlnp+ +W++GvqmvAlnwqt+d g+q+n+al
  EPX73152.1 632 QQIAPYVRSLKFRNFSLPESKTYNHTFSFSERTIKRHG-KTMFPRLSKHNIKYLCRVYPGPLRLGSTNLNPQFYWRMGVQMVALNWQTYDVGLQINDAL 729
                 67889*******************************97.444346****************************************************** PP

    PI-PLC-Y 101 FaengscGYvlKPe 114
                 F+    +GY+lKP 
  EPX73152.1 730 FQADPPSGYLLKPM 743
                 *************5 PP

>> C2  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.1      0.63   1.4e+03      20      68 ..     190     233 ..     166     250 .. 0.71
   2 !   33.9   0.0   1.4e-11     3e-08       2      97 ..     766     871 ..     765     877 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.63
                 SSCEEEEEEEEECEEEEEE-SCSSSSSSEEEEEEEEEESCHTTSEEEEE CS
          C2  20 gssdpyvkvsldgkqkakTrviknslnPvWnekftfevaeleeakLeve 68 
                 ++ +py k+++d+ +  +    +   +  + e+f+++ ++ e++  ++ 
  EPX73152.1 190 NTGKPYRKLCVDDIKEIRQG-SE---SRNYREQFKVSYEH-ENRWFTIV 233
                 45678888888666666665.22...33699999999999.77666665 PP

  == domain 2  score: 33.9 bits;  conditional E-value: 1.4e-11
                 EEEEEEEEEESSSSSST...TSSCEEEEEEEE....ECEEEEEE-SC.SSSSSSEEEEEEEEEESC..HTTSEEEEEEEEECSSSTEEEEEEEEEEGHH CS
          C2   2 klevtvieAknLpnkdk...kgssdpyvkvsl....dgkqkakTrvi.knslnPvWnekftfevae..leeakLeveVfdndrlskddfiGkveiplst 90 
                 +l++++i++++L + +    +++  p+v+v++    +   +  T+v+ +n + P W+e+f+++ a   +  +++++ + ++ + ++d +i ++ +pl +
  EPX73152.1 766 ILDIEIISGQQLRRAKElsnSETLCPFVEVQIhsleETPFRWNTSVVdRNGFRPLWQESFQYKSASvdDVYSVIRFLIHHRASSGNDTVIAEFGCPLYR 864
                 699*********66644566788*********9988788888999887888***********8888888**************89999*********99 PP

                 HHTTHHH CS
          C2  91 llsgeea 97 
                 l+sg + 
  EPX73152.1 865 LESGYRH 871
                 9998765 PP

>> EF-hand_like  Phosphoinositide-specific phospholipase C, efhand-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.2   2.4e-09   5.5e-06       1      41 [.     351     391 ..     351     410 .. 0.89

  Alignments for each domain:
  == domain 1  score: 26.8 bits;  conditional E-value: 2.4e-09
  EF-hand_like   1 fYkiLtqreeideifqeyskdgeklslkelveFLreeQkee 41 
                   f  +L  r e+ ++f++y+++ + ++lk++v+FLr  Qk +
    EPX73152.1 351 FVSMLKTRPEVRQVFNKYTNHSKEMTLKQFVTFLRDSQKST 391
                   6689**********************************987 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0         5   1.1e+04      16      27 ..     306     317 ..     302     320 .. 0.83
   2 !    9.0   0.1   0.00066       1.5       2      27 ..     328     353 ..     327     356 .. 0.90
   3 !    8.0   0.1    0.0013         3       1      28 [.     360     386 ..     360     395 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 5
   EF-hand_6  16 kidaeElrkalr 27 
                 ++++e+++ +++
  EPX73152.1 306 ELTFEDIQCMCQ 317
                 589****99988 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00066
   EF-hand_6   2 lreaFklfDkdgdGkidaeElrkalr 27 
                 l++ F++ D+ g+Gk+++e ++++ +
  EPX73152.1 328 LEQTFRKADTLGTGKLSFEGFQHFVS 353
                 6789******************9987 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.0013
   EF-hand_6   1 elreaFklfDkdgdGkidaeElrkalrk 28 
                 e+r++F+++ ++++ + + ++++ +lr+
  EPX73152.1 360 EVRQVFNKY-TNHSKEMTLKQFVTFLRD 386
                 5799*****.****************94 PP

>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   1.5e-05     0.033       9      70 ..     297     352 ..     294     353 .. 0.87
   2 ?    1.8   0.0      0.15   3.4e+02      42      70 ..     357     384 ..     354     401 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.5e-05
   EF-hand_7   9 kelDtdgdgyldkeellrllrkifqgagegsklsdeelellfkefDtdkdGvisfdEFlkly 70 
                 ++l +d +  l+ e+++++++          + s e le+ f++ Dt + G++sf+ F++++
  EPX73152.1 297 EKLENDETAELTFEDIQCMCQ------KLHLNASYEYLEQTFRKADTLGTGKLSFEGFQHFV 352
                 5677899999***********......5666666778**********************997 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.15
   EF-hand_7  42 sdeelellfkefDtdkdGvisfdEFlkly 70 
                 ++ e++++f++  t+++ ++++  F+++ 
  EPX73152.1 357 TRPEVRQVFNK-YTNHSKEMTLKQFVTFL 384
                 77899999999.89999999999999886 PP

>> EF-hand_10  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.3   7.9e-06     0.018       2      50 .]     307     355 ..     306     355 .. 0.96

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 7.9e-06
  EF-hand_10   2 msfkEvkrlLreiNievddeYAekLFkkcDkSksgrLegeEieeFyklL 50 
                 ++f+ ++ + +++ ++ + eY e+ F+k+D+  +g+L  e +++F  +L
  EPX73152.1 307 LTFEDIQCMCQKLHLNASYEYLEQTFRKADTLGTGKLSFEGFQHFVSML 355
                 7999*****************************************9987 PP

>> EF-hand_8  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   7.7e-05      0.17       2      48 ..     304     348 ..     303     354 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 7.7e-05
   EF-hand_8   2 kgkItreelrrilrilglkkglseeevdilfrefDtdgdGkisfeEF 48 
                 + ++t+e+ +++  +l+l+   s e ++  fr++Dt g Gk+sfe F
  EPX73152.1 304 TAELTFEDIQCMCQKLHLN--ASYEYLEQTFRKADTLGTGKLSFEGF 348
                 7899*******77999999..89999*******************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (896 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       631  (0.0351944); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.69u 0.30s 00:00:00.99 Elapsed: 00:00:00.45
# Mc/sec: 5971.72
//
Query:       EPX73153.1  [L=161]
Description: small histone ubiquitination factor Shf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0029   17.7   0.1     0.0046   17.1   0.1    1.4  1  Lge1      Transcriptional regulatory protein LGE1


Domain annotation for each model (and alignments):
>> Lge1  Transcriptional regulatory protein LGE1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.1   2.6e-07    0.0046      15      71 .]      90     156 ..      61     156 .. 0.75

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 2.6e-07
        Lge1  15 l......kkiesklkeiesldkqleelklkvlkleleldlleeqierdaLrvqLtq....EkLdefl 71 
                        ++++s lk+ ++  +  ++   + ++  l++  ++e+++ d  r+qL++    ++Ld+f+
  EPX73153.1  90 PliklpdASLASQLKSAKKSWQDTSNNVSNFENEFLQQRFFWEKVRPDVFREQLRSntaeKSLDDFV 156
                 14444445999999999999999999999999999************************9******7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       804  (0.0448435); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.27s 00:00:00.66 Elapsed: 00:00:00.41
# Mc/sec: 1185.10
//
Query:       EPX73154.1  [L=600]
Description: U2 snRNP-associated protein Sap145 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-57  192.5   0.1    2.6e-57  192.5   0.1    3.1  4  DUF382    Domain of unknown function (DUF382)
      7e-23   80.2   1.3    1.4e-22   79.3   1.3    1.5  1  PSP       PSP


Domain annotation for each model (and alignments):
>> DUF382  Domain of unknown function (DUF382)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   2.2      0.21   1.9e+03      75      98 ..      47      70 ..      23      86 .. 0.54
   2 ?   -3.6   0.5       1.3   1.2e+04      72      86 ..     174     188 ..     165     198 .. 0.51
   3 !  192.5   0.1   2.9e-61   2.6e-57       2     127 .]     203     328 ..     202     328 .. 0.99
   4 ?   -1.9   0.2      0.38   3.4e+03      76      95 ..     579     598 ..     570     600 .] 0.77

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.21
      DUF382 75 eeekslkekarekvqpklgkldid 98
                +++ks  +  r+k + + ++ +++
  EPX73154.1 47 RQRKSRNQVRRQKKKEQREQQQLQ 70
                222222222333333333333333 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 1.3
      DUF382  72 eekeeekslkekare 86 
                 +++eeek  ++k r+
  EPX73154.1 174 QKREEEKLSRKKLRK 188
                 344444444444333 PP

  == domain 3  score: 192.5 bits;  conditional E-value: 2.9e-61
      DUF382   2 kPevvevaDvdakdPvllvklKssknvvpvpshWsskreylsgkrglekkpfelPkfikeTgieelrealeekeeekslkekarekvqpklgkldidyk 100
                 kP+vv+++Dv+++dP ll++lK+++n+vpvp+hW++kr+ylsg+rg+e++ felP++i++Tgi ++r+a++e+e+++ l++k+re+vqpk+gkldidy+
  EPX73154.1 203 KPDVVDWWDVSSPDPLLLTHLKAYQNTVPVPRHWNQKRDYLSGQRGIERQLFELPSYIRATGIVQMRNAVHENEADMPLRQKMRERVQPKMGKLDIDYQ 301
                 8************************************************************************************************** PP

      DUF382 101 kLhdaFfklqtkPkllkfGdlyyegke 127
                 kLhdaFf++qtkP l+ fG++yyegke
  EPX73154.1 302 KLHDAFFRYQTKPVLTGFGECYYEGKE 328
                 *************************97 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 0.38
      DUF382  76 eekslkekarekvqpklgkl 95 
                 e+ s+   +r+k qpk +k+
  EPX73154.1 579 EQASIVAAKRQKTQPKKEKF 598
                 56677788999999998876 PP

>> PSP  PSP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.3   1.3   1.6e-26   1.4e-22       1      45 [.     337     381 ..     337     382 .. 0.98

  Alignments for each domain:
  == domain 1  score: 79.3 bits;  conditional E-value: 1.6e-26
         PSP   1 kPGviSaeLReALglqegqlPpWiykMqrlGlPPgYpklkipGln 45 
                 +PG iS+eLReALg++ +++PpWiy+Mq++G+PP+Yp+lkipG+n
  EPX73154.1 337 RPGDISDELREALGISVNAPPPWIYAMQKFGPPPSYPDLKIPGVN 381
                 8*******************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (600 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2024  (0.11289); expected 358.6 (0.02)
Passed bias filter:                      607  (0.0338558); expected 358.6 (0.02)
Passed Vit filter:                        70  (0.00390429); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.72u 0.30s 00:00:01.02 Elapsed: 00:00:00.47
# Mc/sec: 3837.49
//
Query:       EPX73155.1  [L=420]
Description: rRNA processing protein Rrp16 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-89  299.5  27.8      6e-89  299.2  27.8    1.1  1  Nop53       Nop53 (60S ribosomal biogenesis)
  ------ inclusion threshold ------
       0.46    8.7   8.8        0.7    8.1   8.8    1.4  1  CDC45       CDC45-like protein
        2.1    8.6  18.9        1.2    9.4   7.6    2.8  2  Cir_N       N-terminal domain of CBF1 interacting co-represso


Domain annotation for each model (and alignments):
>> Nop53  Nop53 (60S ribosomal biogenesis)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  299.2  27.8     1e-92     6e-89       1     398 []      16     382 ..      16     382 .. 0.82

  Alignments for each domain:
  == domain 1  score: 299.2 bits;  conditional E-value: 1e-92
       Nop53   1 SRkgKkaWRKniDitdveegLeevreeeritGgvlsekkdeeLFvvDtkgdeelkkkarkkkkkpLksdeiLaqrsavpavsakrkrkka..kkkkkkk 97 
                 SRk+K +WRK+iD++dve gL+  r ee+i G+++s+k++++LFvvDt gd++++k++rkk  kpLk+deiL+++sav+ + +k k ++   +  +k k
  EPX73155.1  16 SRKNKSSWRKHIDLEDVEGGLQVAR-EEEIRGDDVSKKSNDSLFVVDTFGDDRVAKRSRKK-IKPLKVDEILQNKSAVQGLPSKPKTSGYglNMDNKGK 112
                 9************************.5666************************8888665.5***************996645544444785666666 PP

       Nop53  98 v.skkelarlrklakrkkkg..ekkk.eksakeakkksgsyDlWaeeeeeeeeekkktklstlekkkkvkrPktlkkkpislsalp....avevphaGk 188
                 v sk el+rl++l++r+  g  +  + ++ + + +k++  yD+W++               t+e++ +vkrP+tl+k+p +l+++     +vev+++G+
  EPX73155.1 113 VmSKNELNRLKSLVHRNPLGptA--SaAAASLKTQKEEPAYDVWES---------------TTESTIPVKRPSTLSKAPENLAENVehvpNVEVADPGM 194
                 54999***********9999543..334444445667778****54...............578999****************99999989******** PP

       Nop53 189 SYNPsfedhqellqkaveaEkkrekeeeklerkrekiaekaataeareeelseekdegleeeeeeeeeeeeeeeeeeeeseeeeklnapvkkkpkrKTk 287
                 SYNP+  ++  l+++    E k+eke+ ++ ++++ i +k +   + +   s+e++    +e+ee++     ++e++ e      +n   k+kpkrKTk
  EPX73155.1 195 SYNPDASAWMGLIDRKGSDEIKKEKERLQEIEHQRMISSKIN---DDKGLVSDENE---GSENEEST--V--DAENQIE----GLHN---KTKPKRKTK 276
                 *************88888888888888888888886655333...22222233333...33333322..1..1112222....2344...7889***** PP

       Nop53 288 aqRnkekrrkeeekeekeekkekkkeaqlerlkeikkevaekekeraeaaearkkekrkkkaekkklkrrklgkhkvpepdlevqlsdELsdSLRtLKP 386
                 +qRnke++rk e ++ ++ kk+++ ++ ++r+++i+k+++++e   ++ +       ++ +  +  lk+rk+gkhk+pe++le++l+dEL+ SLR+LKP
  EPX73155.1 277 SQRNKERKRKDEIAKLEAAKKQEQLLKMIDRAPNISKSLNNNEDGNKSLEP-----SNDMDVPEIRLKKRKFGKHKLPENPLELKLGDELTSSLRELKP 370
                 ******************************************999988833.....3333446778********************************* PP

       Nop53 387 eGNLlkDrfksL 398
                 eGNL+kDrf sL
  EPX73155.1 371 EGNLFKDRFLSL 382
                 **********98 PP

>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   8.8   0.00012       0.7     111     203 ..     210     299 ..     174     414 .. 0.63

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00012
       CDC45 111 dieeeleeereayealeeeeesd...eede..eeeeeddddeeeeeeeeedeedeeedeeeskkkrksksdeeeesddddersrkrrrse....psakk 200
                 + ++e+++e+e  +++e++   +   ++d+    + ++++ +e+ee++ ++e++ e  ++++k krk          ++++r+++r+r++     +a k
  EPX73155.1 210 KGSDEIKKEKERLQEIEHQRMISskiNDDKglV-S-DENEGSENEESTVDAENQIEGLHNKTKPKRK----------TKSQRNKERKRKDeiakLEAAK 296
                 446788888887777777777763232222221.1.1111111111111112222222222222222..........2222222222222111111111 PP

       CDC45 201 lrr 203
                 +++
  EPX73155.1 297 KQE 299
                 111 PP

>> Cir_N  N-terminal domain of CBF1 interacting co-repressor CIR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   3.5    0.0087        52      21      35 ..     212     226 ..     209     228 .. 0.87
   2 ?    9.4   7.6    0.0002       1.2       5      35 ..     276     306 ..     275     307 .. 0.92

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.0087
                 HHHHHHHHHHHHHHH CS
       Cir_N  21 leEkkkieerkkeie 35 
                  +E kk++er +eie
  EPX73155.1 212 SDEIKKEKERLQEIE 226
                 5799**********9 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.0002
                 TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       Cir_N   5 gllkNqerVWkaEqkaleEkkkieerkkeie 35 
                 ++ +N er +k+E ++le  kk+e++ k i+
  EPX73155.1 276 KSQRNKERKRKDEIAKLEAAKKQEQLLKMID 306
                 6789************************886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (420 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2001  (0.111607); expected 358.6 (0.02)
Passed bias filter:                      565  (0.0315132); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.28s 00:00:00.90 Elapsed: 00:00:00.45
# Mc/sec: 2803.64
//
Query:       EPX73156.1  [L=905]
Description: COPII vesicle coat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.6e-76  256.4   0.0    4.9e-76  255.5   0.0    1.5  1  Sec23_trunk     Sec23/Sec24 trunk domain
    2.7e-23   81.7   0.3    1.1e-22   79.7   0.1    2.2  2  Sec23_helical   Sec23/Sec24 helical domain
    5.9e-17   62.2   0.0    1.2e-16   61.2   0.0    1.6  1  Sec23_BS        Sec23/Sec24 beta-sandwich domain
    6.8e-14   51.6   5.8    1.2e-13   50.8   5.8    1.5  1  zf-Sec23_Sec24  Sec23/Sec24 zinc finger
    2.9e-08   33.5   0.0    6.6e-08   32.4   0.0    1.7  1  Gelsolin        Gelsolin repeat


Domain annotation for each model (and alignments):
>> Sec23_trunk  Sec23/Sec24 trunk domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  255.5   0.0   1.4e-79   4.9e-76       1     242 [.     306     544 ..     306     545 .. 0.97

  Alignments for each domain:
  == domain 1  score: 255.5 bits;  conditional E-value: 1.4e-79
                  SS--EEEEEEE-SHHHHHHTHHHHHHHHHHHHCTTSS.TSTT-EEEEEEESSSEEEEETSTTSSSSEEEEECHTTSCCSSTSSSSSEETTTTHHHHHH CS
  Sec23_trunk   1 pkppvflFviDvsleaikegelkalkeslkqsLdllP.eepralvglitfdsvvhffelkselrqpkelvvsdlqdvflpladrlLvplseseavled 97 
                  p+p++++F+iDvs+ +i++g+++++ +++++sLd++P +e r++v++i +ds +hff++ + ++++ ++vvsdl+d+flp++++lL++l+e+++ +e+
   EPX73156.1 306 PQPLIYVFLIDVSFISISSGMVATATRTILESLDRIPnKEGRTQVAFIGVDSSLHFFSIAPGAEEASQMVVSDLEDPFLPRNQDLLLNLRECRQGIEN 403
                  79***********************************88*********************************************************** PP

                  HHHHHHHHSTT-TTC-----HHHHHHHHHHHHCHCTS-EEEEEEESS---SSTTTSS-SBTTSCCTSSTTCHHCHSCSSSCHHHHHHHHHHHCTEEEE CS
  Sec23_trunk  98 lLeelpemfavtagkrperalgpalkaavellkavetggkiivfvgslptvgaggklksredeslldidkekaklvkkadkfYkkLakecvkqgisvD 195
                  lL+++++mfa+t  +++++algpalkaa +l++  ++ggki++fv+slp+vg  gkl+ red++ l++++e ++l++++d fYk++a ec++++isvD
   EPX73156.1 404 LLSKFNTMFAST--RDSSNALGPALKAAEQLIE--NIGGKISCFVSSLPNVGY-GKLSLREDPKILGTNRE-SNLLHHQDTFYKSFAVECSTNQISVD 495
                  ************..*******************..999***************.*****************.788888888***************** PP

                  EEEECSS--SHHHHTHHHHTTT-EEEEETTTC..CHHHHHHHHHHHHHH CS
  Sec23_trunk 196 lFlfsldyvdlaelkqlaeltgGqvvlydsFs..aekdasklkqdlkrv 242
                  +Flfs++y d+a+l++l+++t+G++++y +++  +++da k+ ++l  +
   EPX73156.1 496 MFLFSSQYQDVATLSCLPRYTAGKTQFYYRWNaaRSEDALKFASELSDY 544
                  ********************************88899999999999765 PP

>> Sec23_helical  Sec23/Sec24 helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.96   3.5e+03      22      47 ..     394     419 ..     390     433 .. 0.70
   2 !   79.7   0.1   3.2e-26   1.1e-22       1     101 [.     644     746 ..     644     748 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.96
                    HHHHHHHHHHHHHHHHHHHHHH---- CS
  Sec23_helical  22 ladarealdtslvdllsayrkvgasg 47 
                    l++ r+ + + l+++ + + +   s+
     EPX73156.1 394 LRECRQGIENLLSKFNTMFASTRDSS 419
                    67888888888888888888877653 PP

  == domain 2  score: 79.7 bits;  conditional E-value: 3.2e-26
                    -HHHHHHHHHHHHHHHTTTS-HHHHHHHHHHHHHHHHHHHHHH---------..----GGGTTHHHHHHHHHTSTTTS--TT--HHHHHHHHHHHH CS
  Sec23_helical   1 Dqeavtvllakqaidkalesgladarealdtslvdllsayrkvgasgsspsq..lqlpeslklLPlyilallKspafrggnsvpaDervfalslll 94 
                    Dq a++ +l+ +a +kal+s+l+dar+ ++++lv++l +y+k+ a+++  +   lq++++lklLPl++l+l+K+  fr+++ +p+D r+ al+ l+
     EPX73156.1 644 DQSAIMHILTMRATEKALSSNLSDARDGITNKLVEILEVYKKNLAGQNTGAAlpLQISTNLKLLPLLCLGLIKHTGFRKSSHIPSDLRSIALCNLS 739
                    9*******************************************99844333559***************************************** PP

                    H--HHHH CS
  Sec23_helical  95 slpvdql 101
                    +lp++ l
     EPX73156.1 740 TLPTSLL 746
                    ***9876 PP

>> Sec23_BS  Sec23/Sec24 beta-sandwich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.2   0.0   3.4e-20   1.2e-16       2      96 .]     551     633 ..     550     633 .. 0.96

  Alignments for each domain:
  == domain 1  score: 61.2 bits;  conditional E-value: 3.4e-20
                 EEEEEEEEE-TTEEEEEEESSSEECSTBESSEESECSESEEEEEEEETT--EEEEEEESSBTCTTSEEEEEEEEEEEETTSEEEEEEEEEEEEEE CS
    Sec23_BS   2 fnatlevrtSkelkvsgliGncvslsnvsekeiGeggtsewklcsldpdstlavyfdideklksgkqayiQfatlYthssgerrlRVttvalpva 96 
                 ++a+++vr S+++++s+++Gn++++s         +++  ++++s+ +d++++++  i+++++ + +a +Q+a+l+t++sgerr+RV+t++lpv+
  EPX73156.1 551 LEAVMRVRGSSGIRMSSFYGNFFNRS---------SDL--CAFPSFPRDQCYVIEAVIEDTIT-RPFASFQAAILHTTASGERRIRVVTLSLPVT 633
                 79************************.........9**..******************98887.7***************************986 PP

>> zf-Sec23_Sec24  Sec23/Sec24 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.8   5.8   3.5e-17   1.2e-13       1      39 []     232     270 ..     232     270 .. 0.98

  Alignments for each domain:
  == domain 1  score: 50.8 bits;  conditional E-value: 3.5e-17
  zf-Sec23_Sec24   1 PirCrrCraylNpfckidfggkrwiCnfCnhknevppeY 39 
                     + rCrrCr y+Npf+ ++++g+r++Cn C+  nevp++Y
      EPX73156.1 232 ISRCRRCRMYINPFSIFIDNGHRYRCNSCGIVNEVPQSY 270
                     67***********************************99 PP

>> Gelsolin  Gelsolin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.4   0.0   1.8e-11   6.6e-08       3      73 ..     773     843 ..     771     846 .. 0.93

  Alignments for each domain:
  == domain 1  score: 32.4 bits;  conditional E-value: 1.8e-11
                 EEEEEBSSSGGGEETTSEEEEEESSEEEEEEHTT..SHHHHHHHHHHHHHHHHHCTTTTTSEEEEEETTHHHH CS
    Gelsolin   3 vlpkvvklsssslesgdcyLLdngftiflWiGke..ssqeeknfaadlaaeldseerfplpeliredqgkepa 73 
                 +lp+  +l+s   +s + yLLd++f+ fl+iGk+  +++  ++f+++++a+l    rf lp+l++ + + + +
  EPX73156.1 773 ILPPALNLTSAIMQSFGLYLLDTHFQQFLYIGKDavPQLAMDAFGVSSIADLK-AGRFSLPILDN-PLNTRIH 843
                 789999***********************************************.999*******9.9887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (905 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       387  (0.0215851); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.65u 0.30s 00:00:00.95 Elapsed: 00:00:00.45
# Mc/sec: 6035.93
//
Query:       EPX73157.1  [L=457]
Description: replication termination factor Rtf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.2e-21   74.3   9.1    5.3e-12   45.7   1.2    2.8  2  Myb_DNA-binding  Myb-like DNA-binding domain
    4.8e-17   62.0  13.0    1.6e-10   41.1   0.2    3.6  3  Myb_DNA-bind_6   Myb-like DNA-binding domain
  ------ inclusion threshold ------
        0.2   11.9   3.8       0.95    9.7   0.1    2.7  2  SANT_DAMP1_like  SANT/Myb-like domain of DAMP1
        1.9    9.0   4.5       0.71   10.4   0.2    2.4  3  Poxvirus_B22R_N  Poxvirus B22R protein N-terminal
        2.8    8.4   6.4         28    5.2   0.1    3.3  3  DUF3128          Protein of unknown function (DUF3128)


Domain annotation for each model (and alignments):
>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.7   1.2   1.5e-15   5.3e-12       1      45 [.     247     290 ..     247     291 .. 0.97
   2 !   32.2   1.4   2.5e-11   9.1e-08       3      46 .]     300     350 ..     300     350 .. 0.96

  Alignments for each domain:
  == domain 1  score: 45.7 bits;  conditional E-value: 1.5e-15
                      CSSSBHHHHHHHHHHHHHHTTCHHHHHHHHTSS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgkWteeEdelLleavkkhGnrWkkIaerlggRtekqcrsrwrny 45 
                      r++Wt eEde+L  +vk hG+ W+kI + l +R + qcr++wr+y
       EPX73157.1 247 RNSWTIEEDERLKSLVKTHGKLWSKIGKIL-NRRPMQCRDHWRDY 290
                      799***************************.8***********99 PP

  == domain 2  score: 32.2 bits;  conditional E-value: 2.5e-11
                      SSBHHHHHHHHHHHHHHT.TC......HHHHHHHHTSS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 kWteeEdelLleavkkhG.nr......WkkIaerlggRtekqcrsrwrnyl 46 
                      +Wt +E ++Ll+ v ++  +r      W++Ia++l +R + +c++r++++l
       EPX73157.1 300 PWTNDESKRLLDFVWEQReERplmsiqWELIAKKLKNRHRHHCKLRFYSLL 350
                      6*****************8779**************************986 PP

>> Myb_DNA-bind_6  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.1   0.2   4.4e-14   1.6e-10       1      41 [.     250     289 ..     250     300 .. 0.94
   2 !   23.6   2.4   1.3e-08   4.7e-05       1      51 [.     301     357 ..     301     361 .. 0.89
   3 ?    3.0   0.2     0.034   1.2e+02      16      41 ..     380     407 ..     368     417 .. 0.79

  Alignments for each domain:
  == domain 1  score: 41.1 bits;  conditional E-value: 4.4e-14
  Myb_DNA-bind_6   1 WteeEdeiLlklvekygndWknIaealnrRtpkqcfdrwkn 41 
                     Wt eEde+L +lv+++g+ W++I ++ln R+p qc+d+w+ 
      EPX73157.1 250 WTIEEDERLKSLVKTHGKLWSKIGKILN-RRPMQCRDHWRD 289
                     ****************************.**********97 PP

  == domain 2  score: 23.6 bits;  conditional E-value: 1.3e-08
  Myb_DNA-bind_6   1 WteeEdeiLlklvekygn.......dWknIaealnrRtpkqcfdrwknkLrpkisrkk 51 
                     Wt +E ++Ll+ v ++         +W++Ia+ l++R+  +c+ r+ + L  + s+++
      EPX73157.1 301 WTNDESKRLLDFVWEQREerplmsiQWELIAKKLKNRHRHHCKLRFYS-LLKSTSNDE 357
                     ***************9544688989*********99************.777788765 PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.034
  Myb_DNA-bind_6  16 ygn.dWknIaealn.rRtpkqcfdrwkn 41 
                      +  dW++ +e  + + t+++c   +k 
      EPX73157.1 380 EEHiDWNQLSELSGrFWTSSACSKQFKH 407
                     33369******99878899999999986 PP

>> SANT_DAMP1_like  SANT/Myb-like domain of DAMP1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.1   0.00027      0.95      11      49 ..     232     270 ..     228     285 .. 0.87
   2 ?    2.0   0.7     0.067   2.4e+02      27      76 ..     299     350 ..     280     353 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00027
  SANT_DAMP1_like  11 evpeytdeeYeellkeedWtkeetdyLfdlckeydlrfv 49 
                      +v  + + +Y  +l++++Wt ee + L +l+k+    + 
       EPX73157.1 232 SVQAFVRRKYYPFLHRNSWTIEEDERLKSLVKTHGKLWS 270
                      67789999***********************99877665 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.067
  SANT_DAMP1_like  27 edWtkeetdyLfdlckeydlrfvviaDryelek..kkkrsledlkeryYsva 76 
                        Wt++e + L+d++ e     +++  ++el     k+r   + k r+Ys  
       EPX73157.1 299 FPWTNDESKRLLDFVWEQREERPLMSIQWELIAkkLKNRHRHHCKLRFYSLL 350
                      3499999999999998877777777777776544456777778888888765 PP

>> Poxvirus_B22R_N  Poxvirus B22R protein N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       2.6   9.2e+03      10      19 ..     218     227 ..     184     248 .. 0.64
   2 ?   10.4   0.2    0.0002      0.71      33      70 ..     308     345 ..     300     360 .. 0.83
   3 ?   -1.7   0.1       1.2   4.2e+03      47      63 ..     380     395 ..     371     407 .. 0.71

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 2.6
  Poxvirus_B22R_N  10 lYhdtdkkve 19 
                      lY+ + +++e
       EPX73157.1 218 LYNTIVDDLE 227
                      4555555554 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.0002
  Poxvirus_B22R_N  33 kyldsvekaeaelleekfnWtkikeevkeeFkskCens 70 
                      + ld v ++ +e+   +++W+ i++++k++ +++C+ +
       EPX73157.1 308 RLLDFVWEQREERPLMSIQWELIAKKLKNRHRHHCKLR 345
                      55777777777777889******************976 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 1.2
  Poxvirus_B22R_N  47 eekfnWtkikeevkeeF 63 
                      ee+++W++++e ++ +F
       EPX73157.1 380 EEHIDWNQLSE-LSGRF 395
                      57899999875.45555 PP

>> DUF3128  Protein of unknown function (DUF3128)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1      0.72   2.6e+03      49      76 ..     179     207 ..     170     209 .. 0.60
   2 ?    5.2   0.1    0.0078        28      32      53 ..     282     308 ..     280     341 .. 0.67
   3 ?    4.9   0.3    0.0097        35      30      50 ..     398     418 ..     394     435 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.72
     DUF3128  49 kksekiqeilkkrerekkakk.kssedvW 76 
                 k++e+++ ++ + ++e++ +k + se +W
  EPX73157.1 179 KEAESVETHMTRFQEERNLTKhELSELIW 207
                 45555555554444444444448899999 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0078
     DUF3128  32 nCsekwedfkfClklk.....tkksek 53 
                 +C ++w+d+ +C +++     +++s+ 
  EPX73157.1 282 QCRDHWRDYIQCGSVRhfpwtNDESKR 308
                 588888888888888777775333333 PP

  == domain 3  score: 4.9 bits;  conditional E-value: 0.0097
     DUF3128  30 ldnCsekwedfkfClklktkk 50 
                  + Cs++++ +k Cl l++++
  EPX73157.1 398 SSACSKQFKHIKKCLFLQDED 418
                 578************999765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (457 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       682  (0.0380389); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 3018.02
//
Query:       EPX73158.1  [L=368]
Description: microfibrillar-associated protein family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.1e-50  170.1  28.7    6.1e-50  170.1  28.7    1.9  2  MFAP1     Microfibril-associated/Pre-mRNA processing
  ------ inclusion threshold ------
      0.016   15.2   4.1      0.018   15.1   1.2    2.4  2  IGF2_C    Insulin-like growth factor II E-peptide


Domain annotation for each model (and alignments):
>> MFAP1  Microfibril-associated/Pre-mRNA processing
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   2.8      0.17   1.5e+03      63      88 ..     106     131 ..      88     136 .. 0.53
   2 !  170.1  28.7   6.8e-54   6.1e-50       3     217 .]     127     331 ..     124     331 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.17
                 XXXXXXXXXXXXXXX.XXXXS-SSSS CS
       MFAP1  63 keaeakeaedeeeeeaedvddtDeld 88 
                 +++ea+e++++e+++ ++ +d+De++
  EPX73158.1 106 NDNEAEEESESETSSGSEDSDEDEME 131
                 34444444444433334444444433 PP

  == domain 2  score: 170.1 bits;  conditional E-value: 6.8e-54
                 XXXXXXX...XXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXS-SSSSHHHHHHHHHH CS
       MFAP1   3 eeeepkr...kllkPvFvpkskRetiaekeaeeeeeeeeeeeekkeeeerkkeakklveeeirkeaeakeaedeeeeeaedvddtDeldpeaeyeaWkl 98 
                 e+e+++r    l  P+Fv ks ++++++            +++k+ e+ rk+ ++k++ee+i++e+++keae+++e   +dvddtD+ldp+ eyeaW++
  EPX73158.1 127 EDEMERRrqlLLSAPKFVGKSAKNQTNT------------DTSKDVEQDRKQLSQKILEETIQREMKQKEAENTNEL-LKDVDDTDGLDPQGEYEAWQV 212
                 4444333223556789999988876555............6677778889******************999887765.4******************** PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       MFAP1  99 ReLkRikrdreereerekekeelerrrnlteeereaedrellkkqrekeekgkmkfmqkYyhkGAFfqdeeeeellkrdlsaatledkvdkelLPkvmq 197
                 R L+R krd+e+  + eke+  +e+rr +  eere+ dr+ ++++r++++k+ ++f+qk+yhkGAF+qd  ++ l +rd+s+a   +  +ke+LPk+mq
  EPX73158.1 213 RSLQRKKRDKENLLALEKERMSVEERRLMDPEEREKLDRQEAEESRQEKKKKPVQFLQKFYHKGAFYQD--QDILRNRDYSEAAEGEIQHKETLPKAMQ 309
                 ********************************************************************9..9**********9987777********** PP

                 XXX..XXXXXXXX......... CS
       MFAP1 198 vrd..fGkkgrtKYthLkdeDT 217
                 vr   fG +g+t++thL++eDT
  EPX73158.1 310 VRGnaFGMAGQTRWTHLANEDT 331
                 **99*****************9 PP

>> IGF2_C  Insulin-like growth factor II E-peptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   1.2     2e-06     0.018       4      35 ..     206     237 ..     205     247 .. 0.92
   2 ?   -1.0   0.1      0.21   1.9e+03      28      48 ..     246     266 ..     244     270 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 2e-06
      IGF2_C   4 kYdvWqkksaqRlrRGvPaiLrarrfrlqaek 35 
                 +Y+ Wq +s qR +R+  ++L   + r+ +e+
  EPX73158.1 206 EYEAWQVRSLQRKKRDKENLLALEKERMSVEE 237
                 6***************************9986 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.21
      IGF2_C  28 rfrlqaekleaseeakrHrpL 48 
                 r +l  +++e+s++ k+ +p 
  EPX73158.1 246 REKLDRQEAEESRQEKKKKPV 266
                 567778999999999988886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (368 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2195  (0.122427); expected 358.6 (0.02)
Passed bias filter:                      484  (0.0269954); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.72u 0.31s 00:00:01.03 Elapsed: 00:00:00.46
# Mc/sec: 2386.78
//
Query:       EPX73159.1  [L=178]
Description: mRNA processing protein Cox24 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.1e-12   45.8  23.2    5.7e-12   45.3  23.2    1.2  1  DUF1713   Mitochondrial domain of unknown function (DUF1713)
    1.9e-06   28.6   0.1      3e-06   28.0   0.1    1.6  1  Pet20     Mitochondrial protein Pet20


Domain annotation for each model (and alignments):
>> DUF1713  Mitochondrial domain of unknown function (DUF1713)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.3  23.2   6.3e-16   5.7e-12       2      33 .]     147     178 .]     146     178 .] 0.97

  Alignments for each domain:
  == domain 1  score: 45.3 bits;  conditional E-value: 6.3e-16
     DUF1713   2 dSVlrKRrkKMkKHKyKKlrKrtRflrrklgk 33 
                 +SV+rKR++KM+KHKyKK+++++R+lr++lgk
  EPX73159.1 147 TSVKRKRKLKMNKHKYKKRMRKQRALRKRLGK 178
                 7******************************8 PP

>> Pet20  Mitochondrial protein Pet20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   0.1   3.3e-10     3e-06       2      58 ..      40      96 ..      39     174 .. 0.68

  Alignments for each domain:
  == domain 1  score: 28.0 bits;  conditional E-value: 3.3e-10
       Pet20  2 lPkVptTdyleskelttdiLfaGYrPlllpvkenillveankkkekeeklneqevle 58
                lP VptT +++++++++   faGYrPl     ++++   +++  + ++  n++++++
  EPX73159.1 40 LPTVPTTSHVSHRQIARANFFAGYRPLAPSDVSKPEPAPESNLFAIKQMGNNSQKSN 96
                8**************************655555555555444333222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (178 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       753  (0.041999); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1233.21
//
Query:       EPX73160.1  [L=352]
Description: phosphotyrosyl phosphatase activator [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   5.5e-111  370.8   0.0   6.4e-111  370.6   0.0    1.0  1  PTPA      Phosphotyrosyl phosphate activator (PTPA) protein


Domain annotation for each model (and alignments):
>> PTPA  Phosphotyrosyl phosphate activator (PTPA) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  370.6   0.0  3.6e-115  6.4e-111       1     300 [.      13     303 ..      13     304 .. 0.97

  Alignments for each domain:
  == domain 1  score: 370.6 bits;  conditional E-value: 3.6e-115
                 -B----SCHHHHHHCCCHHHHHHHHHHHHHHHHHT........T-SS-HHHHHHHHHHHHHCCCTS---SS-.-SSS-THHHHHHHHHHHHHHHHHHHH CS
        PTPA   1 pakrileeedlekfkkSkayadilefisrlneavkgkkleeeeeasesvekllklLdeleelideippeeqp.sRfGnkafrtwhdrleeraeelleel 98 
                 p++ril+++dl+ f++ +ay++i +fi +lne+v++k+++ e + s+s+e +l +L+++ee+ + +pp e++ sRfGn+af +++d++e ++++l+  +
  EPX73160.1  13 PVRRILNDDDLNLFREGEAYRSIDSFICDLNESVQDKPISAEVKLSPSIEYILLILKRVEEIQNLNPPVENKgSRFGNPAFESFYDQVECETPTLHAAF 111
                 899******************************************************************9977***********************885 PP

                 S-GGGGGG......HHHHHHHHHTTT-BTTTTEE-HHHHHHHHHHHHHHHHTT-STT....--HHHHHHHHHHHHHHHHHHHHHTT-EES--------S CS
        PTPA  99 lpeelkkaelekaaieelkaYlkesfGnatrlDYGtGhElsFlafllcLeklgllkeeeeedeealvlkvfekYlelvrrLqstYtLepAgshGvwGLD 197
                   ee        +ai+e ++Y+ esfGn++r+DYG+GhEl+F+ +ll+L kl+++   ++e + a++l+vf +Y++l+r +qstY LepAgshGvwGLD
  EPX73160.1 112 GLEE--------NAIAEAGKYFYESFGNRKRIDYGSGHELNFMTWLLALRKLEII---SKEYYPAIILRVFVRYIHLMRLIQSTYFLEPAGSHGVWGLD 199
                 5444........57*****************************************...5569************************************* PP

                 SS-SHHHHHHHHCSSS-G....GGGG-HHHHHHHTTT-HHHHHHHHHHHH--S-.HHHH-HHHHHHHCC--HHHHHHHHHHHHHHHTTT-HHHHTT--B CS
        PTPA 198 DyqflpflfGsaQlvehkklkpksildaevveeyakeylYlsaiafinevKkgp.frehSpmLydisavktWekvnkGlikmYkaevLskfpvvqhflf 295
                 D++flpflfGs+Qlv+hk+l+pk+++d+e++e+  ++y+Yl  ++fine+K  + +r hSpm++dis+vktW+kvn+G+ikmY+aevLsk+p++qh lf
  EPX73160.1 200 DFHFLPFLFGSSQLVHHKYLRPKHVRDNEILEMCGDDYMYLGYVRFINELKPDVsLRFHSPMIDDISSVKTWAKVNEGMIKMYRAEVLSKLPIMQHYLF 298
                 ***************************************************9667******************************************** PP

                 BSSSB CS
        PTPA 296 Gsllp 300
                 G+l+p
  EPX73160.1 299 GHLIP 303
                 **987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (352 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       249  (0.0138881); expected 358.6 (0.02)
Passed bias filter:                      239  (0.0133304); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2517.74
//
Query:       EPX73161.1  [L=286]
Description: prohibitin Phb1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      2e-24   86.6  10.3    3.4e-24   85.8   8.2    2.1  2  Band_7         SPFH domain / Band 7 family
     0.0013   17.9   2.7     0.0013   17.9   2.7    1.4  1  YdfA_immunity  SigmaW regulon antibacterial
  ------ inclusion threshold ------
       0.02   14.9   0.8      0.029   14.4   0.8    1.2  1  PRP9_N         Pre-mRNA-splicing factor PRP9 N-terminus
      0.039   13.7   0.1      0.065   12.9   0.1    1.3  1  Band_7_1       SPFH domain-Band 7 family
      0.041   14.0   1.6        6.8    6.7   1.0    2.2  2  E_Pc_C         Enhancer of Polycomb C-terminus


Domain annotation for each model (and alignments):
>> Band_7  SPFH domain / Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.8   8.2   9.4e-28   3.4e-24       2     168 ..      28     207 ..      27     217 .. 0.90
   2 ?    0.3   0.1      0.17   5.9e+02     121     160 ..     216     253 ..     209     257 .. 0.72

  Alignments for each domain:
  == domain 1  score: 85.8 bits;  conditional E-value: 9.4e-28
      Band_7   2 iieegevgvvvr..fGklsrvlepGlhfilPfgrsvtvvsvrvqtldvsvsltvptkDglpvtidvtviyrv.pddapklvaaveresanldnlirrvl 97 
                  ++ g ++v++    G  ++v++ G+hf +P++++ +v++vr++  ++    t+ +kD ++v ++ +v  r      p++++++  + ++ ++++ ++ 
  EPX73161.1  28 DVPGGKRAVLFDrlSGVQKQVVQEGTHFLIPWVQKSIVYDVRTRPRNIAT--TTGSKDLQMVSLTLRVLHRPeIGMLPQIYQNL--GLDYDERVLPSIG 122
                 5899******5556666666******************************..****************998877999*******..9999999999999 PP

      Band_7  98 esalrevisemtleellsnreelaeelknelneqlrkyGvevldvritdidpppevaqalaakqaaeaea..............q 168
                 ++ l++v+++++++el+  re + +++++el +++ ++G+ ++dv+it+ ++ +e+ +a+++kq a++ea              q
  EPX73161.1 123 NEILKSVVAQFDAAELITQREVVSAKIRQELVQRATEFGIRLEDVSITHMTFGKEFTKAVERKQIAQQEAerarflveqaeqekQ 207
                 999********************************************************************99775543333333 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.17
      Band_7 121 aeelknelneqlrkyGvevldvritdidpppevaqalaak 160
                  +e+++ + + l+k G  +  ++i++++ ++++a+ala+k
  EPX73161.1 216 EAEAADFVSKSLDKAGNAL--IQIRSLETSKQIASALAEK 253
                 5666666667777777333..6778999999999999887 PP

>> YdfA_immunity  SigmaW regulon antibacterial
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   2.7   3.6e-07    0.0013     147     267 ..      99     215 ..      67     232 .. 0.82

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 3.6e-07
  YdfA_immunity 147 vtvranierlvGgageetiiarvGegivttiGsaeshkevlenPdsisktvlekgldagtafeilsidiadvdvgenigaklqadqaeadkkiaqa 242
                    + +  +i + +G   +e ++  +G+ i++++ +  +  e++ + + +s ++ ++ ++ +t f i    + dv++++      +  +a   k+iaq 
     EPX73161.1  99 IGMLPQIYQNLGLDYDERVLPSIGNEILKSVVAQFDAAELITQREVVSAKIRQELVQRATEFGI---RLEDVSITHMTF-GKEFTKAVERKQIAQQ 190
                    5556677888899999*********************************************976...567777765433.3356788899****** PP

  YdfA_immunity 243 kaeerramavakeqemkakvqemra 267
                    +ae+ r +   +eqe++a++ +++ 
     EPX73161.1 191 EAERARFLVEQAEQEKQANIIRAEG 215
                    ***************9999866554 PP

>> PRP9_N  Pre-mRNA-splicing factor PRP9 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.8     8e-06     0.029      66     131 ..     182     246 ..     150     265 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 8e-06
      PRP9_N  66 rsrkqillQqhEinlFledykkklksleklkeeadseelkdkekslekfkelleeikekekdsese 131
                  +rkqi+ Q+ E + Fl +  +++k+ + ++ e + e      ksl+k  ++l +i++ e++ ++ 
  EPX73161.1 182 VERKQIAQQEAERARFLVEQAEQEKQANIIRAEGEAEAADFVSKSLDKAGNALIQIRSLETS-KQI 246
                 48*****************************999999999999****999999999887666.333 PP

>> Band_7_1  SPFH domain-Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   1.8e-05     0.065     153     207 ..     132     186 ..     111     190 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.8e-05
    Band_7_1 153 kipvldlaakseelaeklkealkeelaeyGlelekleienislpeevekaldkra 207
                 +  + +l ++ e +++k+++ l ++ +e+G+ le++ i+++++ +e +ka++++ 
  EPX73161.1 132 QFDAAELITQREVVSAKIRQELVQRATEFGIRLEDVSITHMTFGKEFTKAVERKQ 186
                 4556788899999**************************************9875 PP

>> E_Pc_C  Enhancer of Polycomb C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.0    0.0038        14      45      77 ..     124     156 ..     107     168 .. 0.88
   2 ?    6.7   1.0    0.0019       6.8      23      91 ..     200     273 ..     181     280 .. 0.66

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0038
      E_Pc_C  45 ktLDsasAqFAaSAlvtteqllalktkedvvlg 77 
                 ++L s+ AqF a  l+t+ ++++ k ++++v+ 
  EPX73161.1 124 EILKSVVAQFDAAELITQREVVSAKIRQELVQR 156
                 57999**********************998765 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0019
      E_Pc_C  23 eQlqqqqqsa...sstsnssqslvsktLDsa.sAqFAaSAlvtteqllalktked.vvlgigvnGvlsasgvyk 91 
                 eQ +q++q++   ++ + +  ++vsk LD+a  A      l t++q+ +  +++  +v+     G + asg  k
  EPX73161.1 200 EQAEQEKQANiirAEGEAEAADFVSKSLDKAgNALIQIRSLETSKQIASALAEKGsQVTYLPFGGNVGASGNEK 273
                 555444443355566667778********993467778888888888655444332666667777777777666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       920  (0.0513135); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 1961.26
//
Query:       EPX73162.1  [L=93]
Description: ubiquinol-cytochrome-c reductase complex subunit 7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-34  116.3   0.3    4.7e-34  116.2   0.3    1.0  1  UcrQ        UcrQ family
    0.00021   21.6   0.0    0.00027   21.3   0.0    1.2  1  Cyt_b-c1_8  Cytochrome b-c1 complex subunit 8


Domain annotation for each model (and alignments):
>> UcrQ  UcrQ family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.2   0.3   5.2e-38   4.7e-34       1      76 [.      13      88 ..      13      90 .. 0.98

  Alignments for each domain:
  == domain 1  score: 116.2 bits;  conditional E-value: 5.2e-38
                BTTB-S----BSEEEEEE-GGGB-SSTTTTTTSSSSTTCTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTSGGGHH CS
        UcrQ  1 wfGnlgspkqkgiitYslSPfeqkafagalskaifntlrRtksqvlyvlppfiiayliykwakeeneylnrKagrd 76
                w+G+lg+pkqkgiitY+lSPf+q+++ag+l+ ++ nt+rR+ ++ lyv++pf iay+iy w+ke+ne+ln+K gr+
  EPX73162.1 13 WWGHLGGPKQKGIITYTLSPFQQRPMAGFLKTSFQNTFRRVLGESLYVAIPFGIAYYIYCWGKERNEFLNSKWGRH 88
                9***********************************************************************9996 PP

>> Cyt_b-c1_8  Cytochrome b-c1 complex subunit 8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.0     3e-08   0.00027      11      67 ..      26      80 ..      22      85 .. 0.81

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 3e-08
  Cyt_b-c1_8 11 vvYtlSPmqqkvmrglfkdlpkkiakkvkenwvsavlllvpl.vGtygYaenykeqek 67
                ++YtlSP+qq  m g +k   +++ ++v     + + +++p+ ++ y Y+     +e 
  EPX73162.1 26 ITYTLSPFQQRPMAGFLKTSFQNTFRRV---LGESLYVAIPFgIAYYIYCWGKERNEF 80
                89****************9999999999...666777888884477888877777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       281  (0.0156729); expected 358.6 (0.02)
Passed bias filter:                      252  (0.0140554); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.25s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 700.02
//
Query:       EPX73163.1  [L=531]
Description: exonuclease Rex3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.4e-06   27.0   0.0    9.2e-06   26.3   0.0    1.3  1  RNase_T         Exonuclease
    0.00039   20.2   0.0    0.00068   19.4   0.0    1.3  1  DNA_pol_A_exo1  3'-5' exonuclease
  ------ inclusion threshold ------
      0.022   15.0   2.4      0.022   15.0   0.0    2.2  3  EloA-BP1        ElonginA binding-protein 1


Domain annotation for each model (and alignments):
>> RNase_T  Exonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.3   0.0   1.5e-09   9.2e-06      32     164 ..     397     519 ..     379     520 .. 0.83

  Alignments for each domain:
  == domain 1  score: 26.3 bits;  conditional E-value: 1.5e-09
                 EEEEEEEEEEEHSSHCSSSHHHHHHHHHCHHH.HHTCEBHHHHHHHHHHHHHHHTCCCETTTCEEEESSHHHHHHHHHHHHHHHHHCSEHCECHHHHHH CS
     RNase_T  32 eigetfhfyvkptelakltdecteftgitqem.ldeapsfkevleefkellrklallvahnaafdvgflraadkrilkkevpkrnqfldtlildkatlk 129
                 ++g  f+++++p+    +    t+f+git ++ l+   + + ++e++k+l         +n  +++g++  +d   + +    ++ ++dt+il k    
  EPX73163.1 397 KEGILFNQFIRPKGE--VLSLNTRFSGITSKTqLESGITMPVMYERLKQLGI------TRN-TIIIGHGIENDLNAMRL---LHERVIDTAILYKHERG 483
                 46888999*****99..9999*******999856666555555555555544......445.9999*********9999...4679*******999998 PP

                 HHHCHHHHHHHHHTTCHSSSS.TSSHHHHHHHHHHH CS
     RNase_T 130 elartsldklaeklgleedgr.aHrAldDaeatakl 164
                   +r+sl++l ++++ +e+++  H + +Da a++ l
  EPX73163.1 484 PPFRYSLKYLTKRYLGKEIQTdTHHSEEDAIAAMDL 519
                 8888**************************999876 PP

>> DNA_pol_A_exo1  3'-5' exonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   1.1e-07   0.00068      65     139 ..     437     509 ..     410     525 .. 0.82

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 1.1e-07
                     HGHHHHHHHT-TTSEEEESSHHHHHHHHHHHHTS--SSEEEH.HHHHHHTTHSTTSSHHHHHHHHHS.B---GHCCT CS
  DNA_pol_A_exo1  65 alealkrlledenitkvghnakfDlevlardfgielenlfdt.mlaayvldyershsLdsLaekylg.dleldkeeq 139
                     + e lk+l   +n +++gh++++Dl ++        e+++dt  l +   +++  +sL++L+++ylg ++++d  + 
      EPX73163.1 437 MYERLKQLGITRNTIIIGHGIENDLNAMRL----LHERVIDTaILYKHERGPPFRYSLKYLTKRYLGkEIQTDTHHS 509
                     5788999999999*************9999....778888888888888888888************8887777665 PP

>> EloA-BP1  ElonginA binding-protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.4      0.98   5.9e+03     116     116 ..     118     118 ..      80     166 .. 0.55
   2 ?   15.0   0.0   3.7e-06     0.022      15      73 ..     184     242 ..     181     268 .. 0.87
   3 ?   -2.6   0.0      0.98   5.9e+03     120     141 ..     428     449 ..     414     451 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.98
    EloA-BP1 116 s 116
                 +
  EPX73163.1 118 K 118
                 1 PP

  == domain 2  score: 15.0 bits;  conditional E-value: 3.7e-06
    EloA-BP1  15 niRqrYlnlfideclkiyssedeAyerAleeEkavydrsssknvylnvavntlkkLrke 73 
                 + R+r + +f d +l+i  ++ e+ ++ le+E+++   ++sk++y +++   +  L+k 
  EPX73163.1 184 ELRKRMVHIFYDCFLNIGYDSFESKQKSLEDERSICLSTNSKMIYSSSCKAKILALKKS 242
                 6799*********************************************9999999887 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 0.98
    EloA-BP1 120 keeelkgatlYekLkeylLtee 141
                  e+ ++ +++Ye+Lk+  +t +
  EPX73163.1 428 LESGITMPVMYERLKQLGITRN 449
                 4567788999****99888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (531 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       744  (0.041497); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 3600.26
//
Query:       EPX73164.1  [L=543]
Description: Cdc14-like protein phosphatase Clp1/Flp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-48  165.2   0.1    2.4e-46  157.7   0.1    2.3  2  DSPn             Dual specificity protein phosphatase, N-term
    1.5e-17   63.6   0.0      4e-17   62.3   0.0    1.6  2  DSPc             Dual specificity phosphatase, catalytic doma
    2.7e-06   27.2   0.0    4.4e-06   26.4   0.0    1.3  1  Y_phosphatase    Protein-tyrosine phosphatase
    0.00038   20.6   0.0    0.00097   19.3   0.0    1.7  1  PTPlike_phytase  Inositol hexakisphosphate
  ------ inclusion threshold ------
      0.066   12.9   0.0       0.14   11.8   0.0    1.4  1  CDKN3            Cyclin-dependent kinase inhibitor 3 (CDKN3)
      0.071   13.1   0.0       0.14   12.1   0.0    1.4  1  Y_phosphatase3   Tyrosine phosphatase family
        1.9    7.0   9.3        2.5    6.5   9.3    1.1  1  Macoilin         Macoilin family


Domain annotation for each model (and alignments):
>> DSPn  Dual specificity protein phosphatase, N-terminal half
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.7   0.1   9.5e-50   2.4e-46       1     141 []      13     156 ..      13     156 .. 0.94
   2 !    5.3   0.0    0.0098        25      83     107 ..     293     317 ..     271     325 .. 0.88

  Alignments for each domain:
  == domain 1  score: 157.7 bits;  conditional E-value: 9.5e-50
        DSPn   1 eiikdrLyfatlkkkpket..envhyfsiddelvYenFyaDFGPlnlaqlyrfcvkvnkkLkskel..skkkivhytsadekkranaafLigaYavivl 95 
                 e+++d+Lyf++l+++p+e   +++ +f+id+el Y++Fy+DFGPln+++l+rf+v v+ ++ ++++  ++k+iv+y+s+d++ ranaa+L+++Y+v+v+
  EPX73164.1  13 EFLEDKLYFTSLDEPPNEIlyPHMQFFTIDNELAYNPFYHDFGPLNVSHLIRFAVIVHGIMAKHRQakKNKTIVLYSSTDTRLRANAACLLACYMVLVQ 111
                 799**********988884459***************************************77665115689*************************** PP

        DSPn  96 klspeealkplasqekppllpFrDaslgectyeltlldclkglekA 141
                 ++ p+ al+pla++ +pp+l FrDa++  ++y +t++dc++gl++A
  EPX73164.1 112 NWPPHLALAPLAQA-EPPFLGFRDAGYAVSDYYITIQDCVYGLWRA 156
                 *************6.99***************************98 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.0098
        DSPn  83 aafLigaYavivlklspeealkpla 107
                 + +LigaY++ +++++++e+++ ++
  EPX73164.1 293 TGCLIGAYLIYKHSFTANEVISYMR 317
                 569****************998776 PP

>> DSPc  Dual specificity phosphatase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.1       4.1   1.1e+04      88     101 ..     100     113 ..      99     120 .. 0.84
   2 !   62.3   0.0   1.6e-20     4e-17      11     127 ..     213     332 ..     206     338 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 4.1
                 HHHHHHHHHHHHTS CS
        DSPc  88 atliiaYlmktknl 101
                 a+l ++Y+   +n+
  EPX73164.1 100 ACLLACYMVLVQNW 113
                 89*****9988887 PP

  == domain 2  score: 62.3 bits;  conditional E-value: 1.6e-20
                 HHHHHHHTCSEEEEESSSSSEC.ECCTTTTSEEEEEC.CESSTTSCCGGGHHHHHHHHHHH..HHTT-EEEEEESSSSSHHHHHHHHHHHHHHTSCHHH CS
        DSPc  11 lallsklgitlvinvtkevpna.nalkkseieklrip.vedehetkiskyleeavefidka..kqkgkkvlVHCqaGisRSatliiaYlmktknlslne 105
                 +++l  l+    +n+ + v+ +  ++ k  +e + i  +e   e+ + ++l+ ++efid +   ++ + ++VHC+aG+ R+++li aYl++++++++ne
  EPX73164.1 213 QPFLIVLNYFKANNIKRVVRLNgPLYDKDTFESVGIRhQEMYFEDGTVPELSLVKEFIDLVeeVEDDGVIAVHCKAGLGRTGCLIGAYLIYKHSFTANE 311
                 5566666666667777777766766778999999999555599****************885568999******************************* PP

                 HHHHHHHHSTT-SSTHHHHHHH CS
        DSPc 106 ayeflkerrpaispnagfirqL 127
                  +++++  rp ++    ++++L
  EPX73164.1 312 VISYMRIMRPGMVVG-PQQHWL 332
                 *********999887.555555 PP

>> Y_phosphatase  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   0.0   1.7e-09   4.4e-06     155     225 ..     266     329 ..     227     338 .. 0.79

  Alignments for each domain:
  == domain 1  score: 26.4 bits;  conditional E-value: 1.7e-09
                    HHHHHHHHHHHHSTTSS-EEEECSSSSHHHHHHHHHHHHHHHHHHHSEEEHHHHHHHHHTTSTTSS-SHHH CS
  Y_phosphatase 155 llklirkvekskeaksgpvvVhCsaGvgRtgtfvaldillqqleaeeevdvlqivkelrkqRpgmvqtleq 225
                    + ++i+ ve+ +  ++g + VhC+aG gRtg+++ + +++++  +       ++++ +r +Rpgmv   +q
     EPX73164.1 266 VKEFIDLVEEVE--DDGVIAVHCKAGLGRTGCLIGAYLIYKHSFT-----ANEVISYMRIMRPGMVVGPQQ 329
                    336666666666..677******************9998877555.....778899999999999987777 PP

>> PTPlike_phytase  Inositol hexakisphosphate
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   3.8e-07   0.00097      85     147 ..     233     295 ..     211     303 .. 0.87

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 3.8e-07
                      ...EE-HHHHHHHTT-EEEEEEE-TTS---HHHHHHHHHHHHTS-TT-EEEEE-SSSSHHHHH CS
  PTPlike_phytase  85 tpeevyerelaeelslrYaRipitdekapeeedfdalvsilkeapektalvfnCqmGrgRTTt 147
                       +  +y++  +e++++r   + ++d + pe + +++++++++e++++ ++ ++C++G gRT  
       EPX73164.1 233 LNGPLYDKDTFESVGIRHQEMYFEDGTVPELSLVKEFIDLVEEVEDDGVIAVHCKAGLGRTGC 295
                      5556799999**************************************************964 PP

>> CDKN3  Cyclin-dependent kinase inhibitor 3 (CDKN3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   5.4e-05      0.14      94     157 ..     241     304 ..     231     313 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 5.4e-05
                 HHHHHTT-EEEE----TTS---HHHHHHHHHHHHHHHHTT--EEEE-SSSSSHH.HHHHHHHHHH CS
       CDKN3  94 dlyqqygivthhhpiadggtpdiascleimeelatclknyrktlihcygglgrs.clvaacllly 157
                 d ++ +gi  +     dg  p+++ + e ++ l+  +++     +hc  glgr+ cl+ a l+  
  EPX73164.1 241 DTFESVGIRHQEMYFEDGTVPELSLVKEFID-LVEEVEDDGVIAVHCKAGLGRTgCLIGAYLIYK 304
                 6677888888888899*******99999875.77778999999**********658888776654 PP

>> Y_phosphatase3  Tyrosine phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   5.3e-05      0.14     106     138 ..     265     297 ..     227     310 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 5.3e-05
  Y_phosphatase3 106 akkayrkvfealadeepvlfHCtaGKDRTGvla 138
                       k++ +++e++ d++ + +HC aG  RTG l+
      EPX73164.1 265 LVKEFIDLVEEVEDDGVIAVHCKAGLGRTGCLI 297
                     456777788888885599************875 PP

>> Macoilin  Macoilin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   9.3   0.00099       2.5     214     370 ..     369     534 ..     339     541 .. 0.52

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.00099
    Macoilin 214 reaeeqlaaakelv.......evdpvalsknnhslnkkdsslklpeleyrekkksakssrsds.kkkhehn.esvdsklqekeymenkskskrlskses 303
                   a++ +a  ++++         +p ++s+++  ++ +    + + l+++ ++ s++ s++++  +k++++ e++  + ++++  +  + ++++s    
  EPX73164.1 369 LHASNGVALQNQVStplpeptPGQPRKISGHHGMPSPQRLPATSTRLNEKLRSVSKHTSNDENiMNKYSEKpEDHSPNGEDTDTESVGTPTEKISVPRI 467
                 444454455555542222222233444444444444443444444444444433333332222022222222222223333333333333444555555 PP

    Macoilin 304 sgsesellveesvkskssssssssnknskkasagsagssnssskkhsessksvtsssssknskkqkl 370
                   s+s+++ e+ ++s sss  s+s++ s+   +gs++  ns +kk  ++s s++s +s++n +  k+
  EPX73164.1 468 RRSSSQTTPESIARSPSSSFRSTSSRRSSGRWNGSSSPLNSHTKKATQRSASMSSINSTSNGRITKA 534
                 6666677777777777777777777777778888888888888998898888888887777665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (543 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       641  (0.0357521); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 3634.65
//
Query:       EPX73165.1  [L=154]
Description: RNA-binding protein Nhp2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.3e-27   94.5   0.7    5.3e-27   93.4   0.5    1.6  2  Ribosomal_L7Ae  Ribosomal protein L7Ae/L30e/S12e/Gadd45 famil


Domain annotation for each model (and alignments):
>> Ribosomal_L7Ae  Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.4   0.5     3e-31   5.3e-27       2      94 ..      40     132 ..      39     133 .. 0.98
   2 ?   -0.3   0.0     0.049   8.8e+02       9      27 ..     131     149 ..     128     150 .. 0.81

  Alignments for each domain:
  == domain 1  score: 93.4 bits;  conditional E-value: 3e-31
                     HHHHHHHHHHHHTEEEESHHHHHHHHHTTTESEEEEETTSSSGGHHHHHHHHHHHTTEEEEEESCHHHHHHHTTSSSECSEEEEEESTTTHHH CS
  Ribosomal_L7Ae   2 aieevlkkakkagklvlGlkevtkalergeaklvilAedvepeekkkllealckekevpyvkvkskkeLGelvgkkrpvsalaikdegdskdl 94 
                     ++++++kka+k++++ +G+kev+ka+++ge+ lvilA d++p +  +++++lc++++vpyv++ sk+ LG + + krp+s+++++  g++kd+
      EPX73165.1  40 KMMKTVKKASKQKHILRGVKEVVKAVRKGEKGLVILAGDISPLDVISHIPVLCEDNDVPYVYTVSKELLGDASNTKRPTSCVMVVPGGKKKDM 132
                     899*************************************************************************************99986 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.049
                     HHHHHTEEEESHHHHHHHH CS
  Ribosomal_L7Ae   9 kakkagklvlGlkevtkal 27 
                       +ka  ++ G+ e++k++
      EPX73165.1 131 DMSKAEDYKEGYDEILKEV 149
                     45788899******99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1042  (0.0581181); expected 358.6 (0.02)
Passed bias filter:                      719  (0.0401026); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.33s 00:00:00.81 Elapsed: 00:00:00.48
# Mc/sec: 959.17
//
Query:       EPX73166.1  [L=118]
Description: DUF423 protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.9e-23   81.1   0.5    4.9e-23   81.1   0.5    1.4  2  DUF423    Protein of unknown function (DUF423)


Domain annotation for each model (and alignments):
>> DUF423  Protein of unknown function (DUF423)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1      0.54   9.6e+03      29      38 ..       3      12 ..       1      14 [. 0.66
   2 !   81.1   0.5   2.8e-27   4.9e-23       1      88 []      17     106 ..      17     106 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 0.54
      DUF423 29 lyhalallav 38
                +++a+al+++
  EPX73166.1  3 IWNAAALMGL 12
                6777777764 PP

  == domain 2  score: 81.1 bits;  conditional E-value: 2.8e-27
      DUF423   1 lGAfgaHglkkklee.kalesfetavqYqlyhalallavallaskaaasrllklagllflaGivlFSgslyllaltgk.....kvlgaitPiGG 88 
                 lGA+g+Hgl+k++++ + l+s++t+++Y ++hala++a++l+     +  + k+++ l++ G +lFSgs+++l+l  k     k lg+itP+GG
  EPX73166.1  17 LGAYGSHGLQKRVQDpHLLKSWSTGSTYLMFHALAVMAISLH----PKYGKSKWSAPLMIGGSTLFSGSIFALVLLPKtspfrKYLGPITPLGG 106
                 7*********995555999**********************9....67999************************7777889999********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       318  (0.0177366); expected 358.6 (0.02)
Passed bias filter:                      215  (0.0119917); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 860.39
//
Query:       EPX73167.1  [L=203]
Description: adenylyl-sulfate kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-72  243.1   0.0    1.4e-72  242.8   0.0    1.1  1  APS_kinase  Adenylylsulphate kinase
    1.4e-05   25.2   0.0    2.4e-05   24.5   0.0    1.3  1  AAA_33      AAA domain
    0.00058   19.4   0.0     0.0009   18.8   0.0    1.3  1  KTI12       Chromatin associated protein KTI12
    0.00098   19.7   0.0     0.0018   18.8   0.0    1.5  1  AAA_18      AAA domain
  ------ inclusion threshold ------
      0.011   15.6   0.3       0.18   11.6   0.3    2.2  1  CPT         Chloramphenicol phosphotransferase-like protein
      0.019   14.3   0.0      0.027   13.8   0.0    1.4  1  6PF2K       6-phosphofructo-2-kinase
      0.033   13.9   0.0      0.054   13.2   0.0    1.3  1  AAA_29      P-loop containing region of AAA domain
      0.047   13.8   0.0      0.049   13.7   0.0    1.2  1  CbiA        CobQ/CobB/MinD/ParA nucleotide binding domain
      0.061   13.8   0.0      0.073   13.6   0.0    1.4  1  ABC_tran    ABC transporter
      0.071   13.5   0.0      0.098   13.0   0.0    1.3  1  AAA_16      AAA ATPase domain
        0.1   12.3   0.0       0.15   11.8   0.0    1.4  1  PRK         Phosphoribulokinase / Uridine kinase family
       0.12   11.7   0.0       0.44    9.8   0.0    1.8  2  Zeta_toxin  Zeta toxin


Domain annotation for each model (and alignments):
>> APS_kinase  Adenylylsulphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  242.8   0.0   9.1e-76   1.4e-72       2     154 ..      25     178 ..      24     182 .. 0.97

  Alignments for each domain:
  == domain 1  score: 242.8 bits;  conditional E-value: 9.1e-76
                 -EEEEEESSTTSSHHHHHHHHHHHHHHTT--EEEEEHHHHTTTTTTT--SSHHHHHHHHHHHHHHHHHHHHTT-EEEEE----SHHHHHHHHHHHHCH. CS
  APS_kinase   2 gvvvwltGlsgsGKstianalekkLvekgisvylLdGdnvRhgLnkdLgfseedRkenirrvaevaklladaglivlvafisPyreeReaarelleea. 99 
                 g+++wltGls+sGKstia+ale++L ++gi++y+LdGdnvR+gLn+dLgfse+dR+enirr+++vakl+ada+++++++fisPy ++R++are++++  
  EPX73167.1  25 GMTIWLTGLSASGKSTIACALEQYLLQNGITAYRLDGDNVRFGLNSDLGFSEKDRNENIRRIGHVAKLFADASVVSITSFISPYCKDRDQAREAHKKDg 123
                 79*********************************************************************************************9877 PP

                 TEEEEEEEE--HHHHHHHTTTSHHHHHHTTSSSSHTTTSS-----SS-SEEEETT CS
  APS_kinase 100 lkfievfvdtplevceerDpkglYkkareGeikeftGidspYeaPenpelvvdtd 154
                 l fievfvd+p+e++e+rDpkglYk+ar+GeikeftGi++pYeaP +pe+vv++ 
  EPX73167.1 124 LPFIEVFVDCPVEIAEQRDPKGLYKRARAGEIKEFTGISAPYEAPVAPEVVVSSG 178
                 ***************************************************9875 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   0.0   1.6e-08   2.4e-05       2     115 ..      28     142 ..      28     166 .. 0.82

  Alignments for each domain:
  == domain 1  score: 24.5 bits;  conditional E-value: 1.6e-08
      AAA_33   2 vllvGlpGsGKstlaerl...lkklg..avllssdtlrrrlfgtdqqsktdytrvldrlyqilnelarkalsagrnvildatnlsr..rerarflklar 93 
                 ++l Gl++sGKst a  l   l ++g  a++l+ d++r+ l  +   s++d+++   ++++i   +a  +l a ++v+    ++s+  ++r++ +++ +
  EPX73167.1  28 IWLTGLSASGKSTIACALeqyLLQNGitAYRLDGDNVRFGLNSDLGFSEKDRNE---NIRRI-GHVA--KLFADASVVSITSFISPycKDRDQAREAHK 120
                 5789*********99666333667779***************998888877444...44443.3444..5778899999999***8878999******* PP

      AAA_33  94 rlgvpvrivvvetdeetlkeRl 115
                 + g p+  v+v+++ e +++R 
  EPX73167.1 121 KDGLPFIEVFVDCPVEIAEQRD 142
                 ********************95 PP

>> KTI12  Chromatin associated protein KTI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0     6e-07    0.0009       4      57 ..      28      84 ..      26     106 .. 0.79

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 6e-07
                EEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH.TTSS...S--GGGHHHHH CS
       KTI12  4 vvltGlPssGKstrakeLakaleeekrsvvviddeslgiekds...ykdsakekalR 57
                + ltGl +sGKst+a  L+++l +++++ + +d + +++  +s   + ++ + +++R
  EPX73167.1 28 IWLTGLSASGKSTIACALEQYLLQNGITAYRLDGDNVRFGLNSdlgFSEKDRNENIR 84
                679******************************999996555543444444444444 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   1.2e-06    0.0018       1     109 [.      28     141 ..      28     159 .. 0.62

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 1.2e-06
      AAA_18   1 IlltGtpGvGKttlakeLskrl.gf........gvnlrdvakenglllevdpealdeskrldedkldklldaleenssaleegknlvidghlaelesea 90 
                 I+ltG +++GK+t+a +L++ l ++        g              ++  + l++ + + e+ ++++++ +   ++  ++++++ i ++++ +++++
  EPX73167.1  28 IWLTGLSASGKSTIACALEQYLlQNgitayrldG--------------DNVRFGLNSDLGFSEKDRNENIRRIGHVAKLFADASVVSITSFISPYCKDR 112
                 99****************7765333334433332..............333334455555555555555555555555444557778888888888655 PP

      AAA_18  91 akdikk..........vvLtaspeelleR 109
                 +  +            v+++++ e+  +R
  EPX73167.1 113 DQAREAhkkdglpfieVFVDCPVEIAEQR 141
                 44333344888888888888888777777 PP

>> CPT  Chloramphenicol phosphotransferase-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.3   0.00012      0.18       2      25 ..      26      49 ..      25     151 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00012
                -EEEEEE-TTSSHHHHHHHHHHHS CS
         CPT  2 riilLnGgsssGKsslaralqevl 25
                + i L G s sGKs++a al + l
  EPX73167.1 26 MTIWLTGLSASGKSTIACALEQYL 49
                6799***************97654 PP

>> 6PF2K  6-phosphofructo-2-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   1.8e-05     0.027      14      48 ..      26      60 ..      14     106 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1.8e-05
                EEEEEESSTTSSHHHHHHHHHHHHHHTT--EEEEE CS
       6PF2K 14 lvivlvGLpargKtyiskkltrylkwlgvrtkvFn 48
                + i l GL a gK++i+ +l +yl  +g+++   +
  EPX73167.1 26 MTIWLTGLSASGKSTIACALEQYLLQNGITAYRLD 60
                568899*******************9999876655 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   3.6e-05     0.054      23      47 ..      25      50 ..      13      57 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 3.6e-05
      AAA_29 23 g.atlltGpsGsGKSTllDAiqalLv 47
                g ++ ltG s sGKST+  A+   L+
  EPX73167.1 25 GmTIWLTGLSASGKSTIACALEQYLL 50
                446789***********988876665 PP

>> CbiA  CobQ/CobB/MinD/ParA nucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   3.3e-05     0.049       8      64 ..      34      91 ..      28     201 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 3.3e-05
                TTSSHHHHHHHHHHHHHHTT--EEEEEEEESSCCCCH.HTTEB-HHHHCCHCCCHHHH CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxx RF
        CbiA  8 GGvGKTtlaanLaralarrglrVllvDaDpqannlai.leglendiepdlkrllelle 64
                + +GK+t+a++L ++l ++g     +D D+ +  l++ l  +e+d+++++ r++ +++
  EPX73167.1 34 SASGKSTIACALEQYLLQNGITAYRLDGDNVRFGLNSdLGFSEKDRNENIRRIGHVAK 91
                779*****************99999999999877777555556666665555444442 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   4.9e-05     0.073       9      94 ..      23     124 ..      16     200 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 4.9e-05
                 ETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEE..EETTCEGGG.......B-HHHCCHCEEEE-SS--S-TTSBHHHH........HHHTCHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxx........xxxxxxxxxxx RF
    ABC_tran   9 kegekvaivGenGaGKStLlkllagllkpteGei..lldgkdlke.......qeleslrkeigvlpqepqlfpeltvren........esdeeiekals 90 
                 ++g ++ ++G + +GKSt++ +l + l  ++G    +ldg++++         +++  +++i+ + + ++lf + +v +         ++++++ +a++
  EPX73167.1  23 HPGMTIWLTGLSASGKSTIACALEQYLL-QNGITayRLDGDNVRFglnsdlgFSEKDRNENIRRIGHVAKLFADASVVSItsfispycKDRDQAREAHK 120
                 78999**************999987664.6776634555777766777777767777888888888888888888876666777777766666666665 PP

                 HSTT CS
                 xxxx RF
    ABC_tran  91 klgl 94 
                 k gl
  EPX73167.1 121 KDGL 124
                 5554 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   6.5e-05     0.098      25      63 ..      26      66 ..      17     132 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 6.5e-05
      AAA_16 25 elvllsGesGvGKsslvrellralekdggif..lrgkcdql 63
                  + l+G s++GKs+++ +l ++l ++g+ +  l g+++++
  EPX73167.1 26 MTIWLTGLSASGKSTIACALEQYLLQNGITAyrLDGDNVRF 66
                5789*************999999999963334577766666 PP

>> PRK  Phosphoribulokinase / Uridine kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0    0.0001      0.15       2      37 ..      28      63 ..      27     108 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.0001
         PRK  2 IgvagsSGaGkttvarklekifgrekvkaaeiegds 37
                I ++g S++Gk+t+a +le+ + +++++a   +gd 
  EPX73167.1 28 IWLTGLSASGKSTIACALEQYLLQNGITAYRLDGDN 63
                6689*********************99988887765 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0   0.00029      0.44      19      55 ..      28      65 ..      12      71 .. 0.85
   2 ?   -1.2   0.0       0.7     1e+03      98     119 ..     174     195 ..     173     197 .. 0.84

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00029
  Zeta_toxin 19 illgGqpGAGKselaellkdele.rqgnvvrldpDdlR 55
                i l G +++GKs++a +l+++l  ++  + rld+D++R
  EPX73167.1 28 IWLTGLSASGKSTIACALEQYLLqNGITAYRLDGDNVR 65
                67999****************97455577899999988 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.7
  Zeta_toxin  98 iivegtlrspdvvkklaealkk 119
                 ++  gt+++ + v+k++  l++
  EPX73167.1 174 VVSSGTMSTEQSVEKIVAYLQE 195
                 56679*********99998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       556  (0.0310112); expected 358.6 (0.02)
Passed bias filter:                      531  (0.0296168); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.49u 0.30s 00:00:00.79 Elapsed: 00:00:00.45
# Mc/sec: 1347.55
//
Query:       EPX73168.1  [L=451]
Description: ESCRT I complex subunit Vps23 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-10   40.7   0.1    3.6e-10   39.6   0.1    1.5  1  Vps23_core  Vps23 core domain
  ------ inclusion threshold ------
      0.092   12.5   0.1       0.22   11.2   0.1    1.6  1  Prok-E2_B   Prokaryotic E2 family B
       0.22   11.8   3.1       0.54   10.5   3.1    1.6  1  CaMBD       Calmodulin binding domain


Domain annotation for each model (and alignments):
>> Vps23_core  Vps23 core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.6   0.1   6.1e-14   3.6e-10       2      59 ..     388     445 ..     387     446 .. 0.94

  Alignments for each domain:
  == domain 1  score: 39.6 bits;  conditional E-value: 6.1e-14
  Vps23_core   2 lvvaetplsnqllelvaedkAieDtiylLdkaldrgkidldtflKqvReLareqFlkr 59 
                 l++ ++++ +  ++l+++d+ ++  i++L+ al +++++ + ++K v+ Lar+qF++r
  EPX73168.1 388 LYTIPSIIDRKRYKLTSNDAVLNNSIQALNSALVQESVSIQGWMKAVKLLARQQFFIR 445
                 566788999999********************************************98 PP

>> Prok-E2_B  Prokaryotic E2 family B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   3.7e-05      0.22      40      61 ..      76      97 ..      46     106 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 3.7e-05
   Prok-E2_B 40 lrlvypdsfpllppavflqdpe 61
                +rlv+p s+p++pp vfl d++
  EPX73168.1 76 IRLVVPISYPTVPPTVFLEDRN 97
                79*****************986 PP

>> CaMBD  Calmodulin binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   3.1     9e-05      0.54      39      73 ..     320     354 ..     302     355 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 9e-05
       CaMBD  39 khqRklLqAihrlRkvkmeqrklnDqantlvdlak 73 
                 +   klLq i++++++++++  l  ++n+l +lak
  EPX73168.1 320 RVDSKLLQQIKTFQSLRLKKELLDNEKNSLQELAK 354
                 44568*****************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (451 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       937  (0.0522617); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.47
# Mc/sec: 2880.22
//
Query:       EPX73169.1  [L=266]
Description: hypothetical protein SOCG_00925 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       666  (0.0371465); expected 358.6 (0.02)
Passed bias filter:                      270  (0.0150594); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.46
# Mc/sec: 1725.59
//
Query:       EPX73170.1  [L=210]
Description: SMR and DUF1771 domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.5e-19   67.5  14.7    1.9e-18   66.6  14.7    1.5  1  DUF1771   Domain of unknown function (DUF1771)
    3.1e-15   56.3   0.5    6.9e-15   55.2   0.5    1.6  1  Smr       Smr domain
  ------ inclusion threshold ------
        5.9    7.2   7.1        4.9    7.5   1.5    2.3  2  OmpH      Outer membrane protein (OmpH-like)


Domain annotation for each model (and alignments):
>> DUF1771  Domain of unknown function (DUF1771)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.6  14.7   3.2e-22   1.9e-18       1      64 []       4      67 ..       4      67 .. 0.99

  Alignments for each domain:
  == domain 1  score: 66.6 bits;  conditional E-value: 3.2e-22
     DUF1771  1 YerlRaeAdeharkrnelfekAaeAyrrGdgaaAkelseqGkehgekmeeanreAaeaIfeerN 64
                Ye++R  A e+a+kr ++f+kA++Ay++G +a+A+els+ Gke+g+kmee+nr+Aa aI+ ++N
  EPX73170.1  4 YEKYRHLASEQAEKRGHFFQKAQQAYASGHKAEAHELSQNGKECGNKMEEYNRKAAYAIYMYKN 67
                9***********************************************************9998 PP

>> Smr  Smr domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.2   0.5   1.2e-18   6.9e-15       1      78 [.      75     148 ..      75     149 .. 0.85

  Alignments for each domain:
  == domain 1  score: 55.2 bits;  conditional E-value: 1.2e-18
                 EE-TT--HHHHHHHHHHHHHHHHHTT-SEEEEE--STTSTT..HCHHHHHHHHHHHCSTTEEEEEE--CCCTGGGEEEEE CS
         Smr   1 lDLhglrraealnvletfldaasakglrsvevihGkGahag..vgvLrpavmgwLagkeaveafreaekkeGgkGavvVl 78 
                 +DLhgl ++ea +++++ +++++++g  ++ vi+G+G+h+   v +L+pavm++L++++          +e ++G ++V 
  EPX73170.1  75 IDLHGLYVDEAVQAVRQRIHNCIQRGEGHLHVIVGQGHHSVnhVEKLKPAVMQMLDQNNFRY------SHEPNEGRIYVS 148
                 8**************************************5556**************93333......234556666665 PP

>> OmpH  Outer membrane protein (OmpH-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   1.5   0.00082       4.9      29      77 ..       9      58 ..       1      98 [. 0.50
   2 ?    2.8   0.4     0.024   1.4e+02      76     106 ..     166     196 ..     160     197 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.00082
                HHHHHHHHHHHHHHHHHHHHHHHHTTTS....-HHHHHHHHHHHHHHHHHHH CS
        OmpH 29 kklqaeleakekelqklqeelqkkakkle...keekeqelqkkeqelqqkqq 77
                    ++ e+++  +qk+q+++    k+ e     +  +e  +k++e+++ ++
  EPX73170.1  9 HLASEQAEKRGHFFQKAQQAYASGHKA-EaheLSQNGKECGNKMEEYNR-KA 58
                444444445555555555555332222.112333333334444444433.22 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.024
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        OmpH  76 qqqkaqelqkkqqellkpildkinkaikeva 106
                 qq  +q++ ++q ++++ i  + +k+i+ev 
  EPX73170.1 166 QQHHQQQMPQQQPAVVQGIDPETEKVIEEVV 196
                 5666699999999999999999999999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1194  (0.066596); expected 358.6 (0.02)
Passed bias filter:                      711  (0.0396564); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 1481.24
//
Query:       EPX73171.1  [L=348]
Description: pheromone p-factor receptor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-70  237.1  27.7    2.8e-70  236.8  27.7    1.0  1  STE2      Fungal pheromone mating factor STE2 GPCR


Domain annotation for each model (and alignments):
>> STE2  Fungal pheromone mating factor STE2 GPCR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  236.8  27.7   1.6e-74   2.8e-70       5     280 .]      19     297 ..      16     297 .. 0.98

  Alignments for each domain:
  == domain 1  score: 236.8 bits;  conditional E-value: 1.6e-74
                 XXXXXXXXXX-----S-THHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHT--S.---HHHHHHHHHHHHHHHHHHHHHHHHHHH-S--XXXXXXX CS
        STE2   5 nqtitltspdgtevevsfaeldefvkesiktaivyGvqiGaclvlllvlllltskekrkspifilnvlaLllniirslllllyltsplsslyvlftgdy 103
                 nq+i ++s +g  ++v+++++d+  +++i t++++++q+++ ++++++ +ll+s+ekrk+p+fi+n ++++ ++ir++l+++ l+s+ +sl v++   +
  EPX73171.1  19 NQSIPILSTQG-YIQVPLSTIDKAERNRILTGMTVSAQLALGVLIMVMSILLSSPEKRKTPVFIVNSASIISMCIRAILMIVNLCSESYSLAVMYGFVF 116
                 78888999888.67************************************************************************************* PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXXXXXXXXXXXXX CS
        STE2 104 srvsrsdlavsvaanvlsvllvalieasLvlQvrvvfstlpkllrvvltalsallalvtvgfrlalavlnirail.....eaeetsssswleslslilf 197
                 + v ++ + + ++  ++ ++++++ e+s++lQvr+++++  +++++++t++s+ l+l++v+f+++ ++++i+ +l     ++++ s + w++ + +ilf
  EPX73171.1 117 ELVGQYVHVFDILVMIIGTIIIITAEVSMLLQVRIICAHD-RKTQRIVTCISSGLSLIVVAFWFTDMCQEIKYLLwltpyNNHQISGYYWVYFVGKILF 214
                 *************************************777.999******************************************************* PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHHHHHHHHTTXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        STE2 198 avsInffslifvvKLvlairtrrklglkqfgpmqvllimscqtliiPsifaileyavksndelasltltlVvlsLPLsslwAs 280
                 avsI+f+s++f++KL++ai  r+k+g   fgpmq++li+scq+l++P+if+i++ + ++ d+++s+t++l ++sLPLsslwAs
  EPX73171.1 215 AVSIMFHSAVFSYKLFHAIQIRKKIGQFPFGPMQCILIISCQCLFVPAIFTIIDSFIHTYDGFSSMTQCLLIVSLPLSSLWAS 297
                 **********************************************************************************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (348 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       871  (0.0485805); expected 358.6 (0.02)
Passed bias filter:                      276  (0.0153941); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2454.41
//
Query:       EPX73172.1  [L=390]
Description: ARP2/3 actin-organizing complex subunit Arp2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.1e-115  385.0   0.0   1.6e-114  382.7   0.0    1.8  1  Actin     Actin
     0.0066   15.3   0.0       0.13   11.1   0.0    2.5  1  MreB_Mbl  MreB/Mbl protein


Domain annotation for each model (and alignments):
>> Actin  Actin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  382.7   0.0  1.8e-118  1.6e-114       6     404 ..       5     384 ..       2     386 .. 0.96

  Alignments for each domain:
  == domain 1  score: 382.7 bits;  conditional E-value: 1.8e-118
       Actin   6 avVlDnGssttraGyagedaPkavipslvgkprgrkvea.......klyvgdealtkrpelevrspvedGvvedwdaveelwehvlkeelkvdpeehpl 97 
                  +VlDnG++++++Gya +++P++ +ps+vg+p  r +e+       ++ vgdea + r+ l+v++p+e+G+++d +++++lw+++++++lk+d++ +++
  EPX73172.1   5 PIVLDNGTGFVKVGYAKDNFPRHQFPSIVGRPILRAEEKtgdiqikDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEMNNLWDYTFYDKLKIDTNGQKI 103
                 79****************************999998888999999999*****9999****************************************** PP

       Actin  98 lltepplnppkqrekalEivfEkfkvpalylaksavlsafasgkstglvvDsGasvtsvvpVldGyvLkkairrsdlgGkaLteqlkellssknvevtp 196
                 lltepp+np ++rek++E +fE +++ ++y+a +avls++a+g+s+g+vvDsG++vt+vvpV++ +vL++ + r+d++G++ t++l +ll +k      
  EPX73172.1 104 LLTEPPMNPVANREKMCETMFERYNFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHVVPVYESVVLNHLVGRLDVAGRDATRYLINLLLRK------ 196
                 *******************************************************************************************98...... PP

       Actin 197 rylikkkkvveaessaekeelekltesyktleeeevleeiKesvcevsedpegdeekss..sspeksYeLPDgseiklgeeRfkvpEiLFdpsligses 293
                                         +++++ +++ e+++e+Ke++c+vs+d e d++ s+  +  +++Y+LPDg++ik+g+eRf++pE+LF+p+l+gse+
  EPX73172.1 197 ------------------------GYAFNRTADFETVREMKEKLCYVSYDLELDHKLSEetTVLMRNYTLPDGRVIKVGSERFECPECLFQPHLVGSEQ 271
                 ........................9**************************9966655544999*********************************** PP

       Actin 294 aleeekskllgiselivaainacdvdlrpeLlanivvtGGnsllpglteRlekelaql...........askgvkvkiiapeeerkysaWiGGSiLAsl 381
                           g+se i+++i+a+dvd+r+ L+  iv++GG+s++ gl +Rleke++ql             +++kvki  ++ +r+++++iGG++LA++
  EPX73172.1 272 P---------GLSEFIFDTIQAADVDVRKYLYRAIVLSGGSSMYAGLPSRLEKEIKQLwfdrvlhgdpsRLPNFKVKIEDAP-RRRHAVFIGGAVLADI 360
                 *.........************************************************8888888888777778********.***************9 PP

       Actin 382 g.tfqqlwvskqEYeEqGssvver 404
                 + +  ++wvskqE+eE+G+++ ++
  EPX73172.1 361 MaQNDHMWVSKQEWEEYGARALDK 384
                 95677**************98765 PP

>> MreB_Mbl  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   0.0   1.4e-05      0.13       6     297 ..       8     317 ..       3     320 .. 0.57

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 1.4e-05
                 EEE-SSEEEE.EETTTEEEEEEES-EEEETT.........T--EEEESHHHHTTTTS-GTTEEEE-SEETTEESSHHHHHHHHHHHHHHHHTSS-SS-- CS
    MreB_Mbl   6 iDLGtantlv.yvkgkgivlnepsvvAikkk.........tkkvlavGeeAkkmlgktpgnikavrPlkdGviadlevaeellkyfikkvkkkkslskp 94 
                 +D Gt  + v y+k+++   + ps+v              + k + vG+eA+ +    +  +++  P+++G+i d+e  ++l  y + +  k   ++ +
  EPX73172.1   8 LDNGTGFVKVgYAKDNFPRHQFPSIVGRPILraeektgdiQIKDVMVGDEAEAV----RSLLQVKYPMENGIIRDFEEMNNLWDYTFYDKLKI-DTNGQ 101
                 566666665556666666666666664322211122232223335677777664....45678889****************99988776664.45667 PP

                 EEEEEE-SS--HHHHHHHHHHH.H..HTT-SEEEEEEHHHHHHHHTT--TTSSS-EEEEEE-SS-EEEEEEETTEEEEEE...EES-SHHHHHHHHHHH CS
    MreB_Mbl  95 rvvicvPsgiteverrAvkeaa.k..kaGarevllieeplaAAiGaglpveepsgnmvvdiGggttevavislggivtsk...svrvaGdeldeaiiky 187
                 +++++ P      +r+ + e++ +  + G+  v +     + A          s+ +vvd G g t v+ + + ++v  +   ++ vaG +    +i++
  EPX73172.1 102 KILLTEPPMNPVANREKMCETMfEryNFGGVYVAIQAVLSLYAQ-------GLSSGVVVDSGDGVTHVVPV-YESVVLNHlvgRLDVAGRDATRYLINL 192
                 77777776655555555554431311345544444433333333.......33567899999999988654.455555441225689998888877775 PP

                 .HHHHH..SEE--HHHHHHHHHHH-BSS--HHHH.....EEEEEEEETTTTCEEEEEEEHH..HHHHHHHHHH......HHHHHHHHHHHHTS-HHHHH CS
    MreB_Mbl 188 .irkky..nlliGertaekikieigsavkeeeee.....kmeikGrdlvtglpkevevsse..evrealkepv......saiveavkevLektppeLaa 270
                  +rk y  n +   +t++++k ++ ++  + e +     ++++  r+ +    + ++v se  e  e+l +p         + e +  +++++  +  +
  EPX73172.1 193 lLRKGYafNRTADFETVREMKEKLCYVSYDLELDhklseETTVLMRNYTLPDGRVIKVGSErfECPECLFQPHlvgseqPGLSEFIFDTIQAADVDVRK 291
                 256655115566778888888888877654333222334677777777666667777776622344666544211111123555566666666655554 PP

                 HHHHH-EEEESGGGGSBTHHHHHHHHH CS
    MreB_Mbl 271 divdrgivltGGgallkgldkllseet 297
                   + r+ivl+GG+++  gl + l++e+
  EPX73172.1 292 Y-LYRAIVLSGGSSMYAGLPSRLEKEI 317
                 4.4478888888888888888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (390 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       493  (0.0274974); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.31s 00:00:00.87 Elapsed: 00:00:00.47
# Mc/sec: 2481.08
//
Query:       EPX73173.1  [L=379]
Description: PvGal biosynthesis protein Pvg5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (379 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       551  (0.0307323); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.28s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 2592.55
//
Query:       EPX73174.1  [L=372]
Description: triose phosphate transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.9e-17   62.2  28.5      6e-17   61.9  28.5    1.1  1  TPT             Triose-phosphate Transporter family
    2.3e-06   27.8  40.5     0.0001   22.5  15.2    2.1  2  EamA            EamA-like transporter family
  ------ inclusion threshold ------
       0.12   12.8   1.6       0.34   11.3   1.6    1.8  1  FLILHELTA       Hypothetical protein FLILHELTA


Domain annotation for each model (and alignments):
>> TPT  Triose-phosphate Transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.9  28.5     1e-20     6e-17      12     289 ..      88     360 ..      77     361 .. 0.90

  Alignments for each domain:
  == domain 1  score: 61.9 bits;  conditional E-value: 1e-20
         TPT  12 llnvvfnilnKkilnvfpyPltvsavqllvgsvlilvlwalglkkrpkisseflkailplalvktlghvlavvslskvaVSfthtvKasePiFtvilsr 110
                 l+ +++ +lnK++lnv+  Pl++ ++q++ + v++ ++w +   + + +  + +k++    +vk+lg v+ +  ls v+VSf ++ + +   Ft++ls 
  EPX73174.1  88 LFAILVTVLNKQALNVIRAPLLMLSLQMAFTAVMVKAYWWVSSGSSQTLPLSSVKQLKKFIFVKILGIVSKTYCLSFVPVSFYQISRGLLLPFTILLSF 186
                 6788999***********************************************************************************99******* PP

         TPT 111 lllgeklsllvylsLlpivgGvalasvtElsFnligfisAlisnltfslrnifsKkllkklkdldalnlfaiitilslllllPvallvegvlktpsllk 209
                 lll +k++   ++    ++ G +     E +  +ig++  + s +t ++ ++  K  +++   ld   ++ + t +s + l+  +  +e  + ++  ++
  EPX73174.1 187 LLLHQKTHAFPLIGCFLVMLGFVFGVQFEQHVPVIGIVLGIWSSFTTAIESVAVKHYVHEFPTLDL--IYIFATYMSGFCLFLSISSLEL-YSVVRSVN 282
                 ************************************************************533444..4555566666555544444444.55555555 PP

         TPT 210 stkvslkevllllllsgvlfhlynqvaymvLervspvthsvantvKrvvvIvlsvlvfknpvsllnaiGtavaivGvflY 289
                  +  ++ ++ + ll+s+  ++  n+ +++ ++ +spv++ ++ +++ v+   ++v ++++ + +  + G+++ + G+ lY
  EPX73174.1 283 GA--QIAKFSMILLASSCSNFYLNIATFTQIKVTSPVSYMISVATRGVLQTLFAVAFLGETLYVNRIYGVVLILGGTTLY 360
                 55..689************************************************************************9 PP

>> EamA  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5  17.2   4.2e-05      0.25       4     134 ..      79     210 ..      76     212 .. 0.88
   2 !   22.5  15.2   1.7e-08    0.0001       2     135 ..     221     360 ..     220     362 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 4.2e-05
        EamA   4 illallaalfwaiyfvls.killrkv.spltltfvrfliagillliiallkegklaklslkdwllllllgllgtvlafllffyalkktsasnaslitsl 100
                 i++a+++ +++ai  ++  k++l+ +  pl ++ +++ + ++++ ++ +++ g+ + l+l++++ l    ++  +l+ +  +y l+ +++s+  +   l
  EPX73174.1  79 IFFAVASQILFAILVTVLnKQALNVIrAPLLMLSLQMAFTAVMVKAYWWVSSGSSQTLPLSSVKQL-KKFIFVKILGIVSKTYCLSFVPVSFYQISRGL 176
                 78999999****9888877999999988999999***99999999999999999978888887765.44446778899999****************** PP

        EamA 101 ePvftlilsvlllgekltlkqllgivlillGvll 134
                    ft++ls+lll++k   + l+g++l++lG ++
  EPX73174.1 177 LLPFTILLSFLLLHQKTHAFPLIGCFLVMLGFVF 210
                 *******************************875 PP

  == domain 2  score: 22.5 bits;  conditional E-value: 1.7e-08
        EamA   2 lgillallaalfwaiyfvlskillrkvspl..tltfvrfliagillliiallkegkl.aklslkd...wllllllgllgtvlafllffyalkktsasna 94 
                 +gi+l + ++++ ai  v+ k+ ++++++l   + f +++ ++ l+l i+ l+  +  ++ +  +   +  +ll +  +++  +++ f+ +k ts+   
  EPX73174.1 221 IGIVLGIWSSFTTAIESVAVKHYVHEFPTLdlIYIFATYMSGFCLFLSISSLELYSVvRSVNGAQiakFSMILLASSCSNFYLNIATFTQIKVTSPVSY 319
                 79***************************9543344555555555555544444444434444443324444555557888888999999********* PP

        EamA  95 slitslePvftlilsvlllgekltlkqllgivlillGvlli 135
                 ++ +++  v+ ++++v++lge+l +  + g+vlil G+ l 
  EPX73174.1 320 MISVATRGVLQTLFAVAFLGETLYVNRIYGVVLILGGTTLY 360
                 *************************************9886 PP

>> FLILHELTA  Hypothetical protein FLILHELTA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   1.6   5.7e-05      0.34      21      51 ..     179     209 ..     168     245 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 5.7e-05
   FLILHELTA  21 pvshvtsFLiLHElTAivPllglfalfhyld 51 
                 p++ + sFL+LH  T   Pl+g f ++  + 
  EPX73174.1 179 PFTILLSFLLLHQKTHAFPLIGCFLVMLGFV 209
                 899********************99987654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (372 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       875  (0.0488036); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 2499.07
//
Query:       EPX73175.1  [L=94]
Description: hypothetical protein SOCG_05785 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
       0.29   11.4   1.6       0.42   10.9   1.6    1.3  1  Sigma_reg_N  Sigma factor regulator N-terminal


Domain annotation for each model (and alignments):
>> Sigma_reg_N  Sigma factor regulator N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   1.6   2.3e-05      0.42       9      52 ..      27      74 ..      25      85 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 2.3e-05
  Sigma_reg_N  9 rksilrivlislivlllifvilvvtllyl....aekegnklrevlela 52
                 r s++ + + sl+++ll +++l++tl+ +    +++ +++ ++++++ 
   EPX73175.1 27 RISFFIVLSSSLLFFLLCSPLLFLTLSTYlvfyIHNLHQQNMRQTDHD 74
                 5688999999************88888877999666666666665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       795  (0.0443416); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 689.93
//
Query:       EPX73176.1  [L=901]
Description: alpha,alpha-trehalose-phosphate synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     3e-141  471.4   0.2   3.9e-141  471.0   0.2    1.1  1  Glyco_transf_20  Glycosyltransferase family 20
    4.5e-28   98.0   0.0    7.2e-28   97.3   0.0    1.3  1  Trehalose_PPase  Trehalose-phosphatase


Domain annotation for each model (and alignments):
>> Glyco_transf_20  Glycosyltransferase family 20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  471.0   0.2  4.4e-145  3.9e-141      31     473 ..     181     621 ..     151     622 .. 0.94

  Alignments for each domain:
  == domain 1  score: 471.0 bits;  conditional E-value: 4.4e-145
                      SSHHHHHCCCHHCC...C-EEEEEEECCES-CCC...HCCCCHHHCCCCCEEEEEE-HHHHHHHCCCHHHHCHHHHHTT-GG....G----HHH CS
  Glyco_transf_20  31 sgglvsalkglkee...tevvwvgwlgvevdesee.akekvskeleekfsvvpvflsdekveeyyngfsksvLWpllHYklpdsseekefersa 120
                      ++gl sa+ ++ ++   t+ +wvg lg+++++ ++ +k+++s  l  k+++++v++sd ++e +yn+++ ++LWp lHY+ + +  +   e+++
       EPX73176.1 181 NNGLFSAVGAAVRDkkiTNQLWVGLLGMPTESLSKkTKDAISAALLVKHQSLAVYTSDSEFEGHYNHYCRKILWPSLHYQHN-EIFSFFHEENN 273
                      344666665555556667779***********99989*********************************************.8899999**** PP

                      HHHHHHHHHHHHHHHHCC--TT-EEEEESGGGTTHHHHHHHCCTTSEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHH CS
  Glyco_transf_20 121 wdaYvkvnklFAdkiveeikdgdliwvhDYhLmllPellRkkledakigfflHiPFPsseifriLpvreeilegllgadliGFhtedyarhFls 214
                      wdaYv+vn++FAdki+e ++ gd+iwv+DYhL+l+P ++Rkkl++a ig f+H++FPsse+fr++++r+e+l g+lga+liGF+te+y+rhFl+
       EPX73176.1 274 WDAYVSVNQAFADKIIETYRSGDTIWVNDYHLLLVPGMVRKKLPNAAIGLFVHVSFPSSEVFRCFARRNELLLGMLGANLIGFQTEEYKRHFLQ 367
                      ********************************************************************************************** PP

                      HHHHHSSEEEECTTEEEEETTEEEEEEE------HHHHHHHCCSCHHHHHHHHHHHHT.TTSEEEEEEEEC-GGG-HHHHHHHHHHHHHH-GGG CS
  Glyco_transf_20 215 ccsrllgleveskrggveykgrkvsvkalpigidverlesalkkesvsekvkelkerfenkkklilgvDrlDyikGvkqkllaferfLeeypel 308
                      +csr+l +e++     + +++r ++v + p++ d+e++++ l +e++ e+++ lk+r+en  ++ +g D+lD i+G+++kllafe+fL ++p++
       EPX73176.1 368 SCSRVLYAEATFG--RILLEDRYIDVYSHPVSADPESVQANLDSEETIETIEVLKKRYEN-LNVFVGCDKLDPIRGIREKLLAFEQFLYDNPSY 458
                      ******9999988..689****************************************99.7******************************** PP

                      TTTEEEEEEEEB-STTSHHHHHHHHHHHHHHHHHHHHH-BTT..B-SEEEEES---HHHHHHHHHH-SEEEE--SSBSS-CHHHHHHHCSTTT- CS
  Glyco_transf_20 309 rgkvvlvqiavpsredveeyqelekeveelvgrINgefgtld..ytPvvylersldfeeliallaaadvllvtslRdGmnlvakeyvvcqqekk 400
                      +++++l+q+++ + e  +    +  ev+++v+rIN+ fg  +  + Pv +l r+l++++++a+l++ad ++vtslR+Gm+l+++e++ +qqekk
       EPX73176.1 459 QKNTILLQTSAFTDEARQ----YGVEVSDIVTRINSTFGDFSldHLPVTFLSRDLSYAQYLAVLSIADGFIVTSLREGMSLTCHEFILTQQEKK 548
                      ********9887776665....99***************86655************************************************** PP

                      -EEEEETTBGGGGT-TTTSEEE-TT-HHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHH CS
  Glyco_transf_20 401 gvLiLSeFaGaaqsLkdaailvNPwdieevaeaikeaLkmseeerkkrekkllkqvskhdvqsWaesflselk 473
                      ++Li+SeF+G+++  +++a++vNPw + e+++a+++aL+m+++ +kkr    ++ + +h+++ Wa +f ++lk
       EPX73176.1 549 SPLIVSEFIGCSAFFREGALIVNPWSTLEMSHAMRKALEMDDASKKKRYDLCINVIRNHTASTWAAEFENRLK 621
                      ********************************************************************99987 PP

>> Trehalose_PPase  Trehalose-phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.3   0.0     8e-32   7.2e-28       2     210 ..     657     874 ..     656     888 .. 0.88

  Alignments for each domain:
  == domain 1  score: 97.3 bits;  conditional E-value: 8e-32
                      EETBTTTB---SSGGG--B-TT.HHHHHHHHHTTS-..EEEE-SS-HHH.HHHHH---SSEEEEGGGTEEE-TT--EEE-.....HHHHTTHHH CS
  Trehalose_PPase   2 lDydGTlspivedpdaavpsse.llslLkkLasdpknvvaivSGrslke.eellvkvpelglaaeHGaeirspsgedwen.....qaevedlew 88 
                      l +dG  + +  +++ +  +   ++++L +L +dpknv++i S  +++e  +l+v++p+lgl+ae+G++++  + +d +         +++++w
       EPX73176.1 657 LNFDGQAVSWEGRHEFMDYHYGyIINILTRLVNDPKNVIYICSCLDRDElDSLFVNLPGLGLIAENGCYVKPHTAGDDNLqgwirLFKKDEMTW 750
                      5666666666666555555543278************************99********************9988775555555599******* PP

                      HHHHHHHHHHHHTTSTT-EEEEETTEEEEE-TT--TT..THHHHHHHHHHHHHHH.--EEEE-SSEEEEE-S---HHHHHHHHHHTS------- CS
  Trehalose_PPase  89 lkevkeileektertpGsyiEekkfalsvHyrnaddeelqakelaehlesvltdkpdlevtqgkkvvevrpqgvsKGkaverlleslgsadsed 182
                      ++++ +i e+++er +Gs++ + + a+ ++y +a+++e  +++++e + sv+++   +++      v + p+  sK  a++  l+++ ++ ++ 
       EPX73176.1 751 RDSMHDIIEYYAERNQGSSLIDHGYAMEFNYVKAENKENGMRNALELCSSVNETGNTCKAIPMEGHVLIEPKNISKATAANYTLNKILHNPEDL 844
                      ********************************************************************************************** PP

                      -EEEEEE-SSTTHHHHTTS-TT.....-EE CS
  Trehalose_PPase 183 dfvlciGDdrtDedmFsvlrktk..esgvs 210
                      d+vl++G+ rtDe  F + ++ +  + +vs
       EPX73176.1 845 DLVLVAGNNRTDEGTFVWANRLPifSFTVS 874
                      ********************9974444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (901 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       465  (0.0259356); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.72u 0.29s 00:00:01.01 Elapsed: 00:00:00.47
# Mc/sec: 5738.41
//
Query:       EPX73177.1  [L=224]
Description: 20S proteasome component beta 6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-32  112.7   0.0    3.9e-32  111.3   0.0    1.6  1  Proteasome  Proteasome subunit


Domain annotation for each model (and alignments):
>> Proteasome  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.3   0.0   2.2e-36   3.9e-32       1     180 [.       9     199 ..       9     209 .. 0.88

  Alignments for each domain:
  == domain 1  score: 111.3 bits;  conditional E-value: 2.2e-36
                 HHHS-EEEEEEETTEEEEEEEEEEEETTEEEESSSSTSEEEEETTEEEEEEESHHHHHHHHHHHHHHHHHHHHHHSSGTCHHHHHHHHHHHHHHHHHHC CS
  Proteasome   1 vkkGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigvafaGlaaDartlvrraraeaqlyrlrygrpipverlvarvaaklqaytqrs 99 
                 v++G+t+++i+g+++ +la+d+r+  g  + +++ + +++++ d ++v+++G  aDa +lv+r++++++ly+ +++r+++ +    ++a+++   ++ +
  EPX73177.1   9 VQNGGTTIAIAGEGFSLLAGDTRNVNGYNI-NTRFMPRVHEVGDDLVVGASGFEADALALVKRIQQRIELYHDNHDRKMNAQ----SCARMVRTLLYGK 102
                 679**********************99999.66669**********************************************....9999999999999 PP

                 TTTTTSEEEEEEEEETTTEEEEEEEETTSEEEEESSEEEESTTHHHHHHHHHHHH.................STTBSHHHHHHHHHHHHHHHHHHBTT CS
  Proteasome 100 grrpfgvslliagvdeeggpeLyqidpsGsyieekdavaiGsgseaaktalekey.................kedltleeavelavkalkealerdkl 180
                 ++ p++v +l+ag+d+e+  e+y++dp Gsy +e  + a Gs++++++++l++++                 +  ltle+a++l+  a  +a er   
  EPX73177.1 103 RFFPYYVYTLVAGLDKENLGEIYSFDPVGSYERE-WCRAGGSAANFITPFLDNQVnlhnqyipgtngaepkpHRLLTLEQAMKLVHDAFTSAGERHIE 199
                 99********************************.7*****************997777777777777664444477777777777777777777655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       369  (0.0205812); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.48
# Mc/sec: 1393.81
//
Query:       EPX73178.1  [L=158]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-16   60.4   5.7    1.7e-09   37.5   0.9    2.0  2  Ilm1      Increased loss of mitochondrial DNA protein 1


Domain annotation for each model (and alignments):
>> Ilm1  Increased loss of mitochondrial DNA protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.5   0.9   9.7e-14   1.7e-09      15     110 ..      17     108 ..       7     111 .. 0.88
   2 !   26.7   0.2     2e-10   3.6e-06     131     165 .]     109     143 ..     106     143 .. 0.92

  Alignments for each domain:
  == domain 1  score: 37.5 bits;  conditional E-value: 9.7e-14
        Ilm1  15 ltlavylltspeviadqelvyllgealridaarsfskpssplAflgvlLlvlalvDlvllslneelavaeywgrqaplRlllffivslyiYlsses 110
                   l+v +l++pe + ++ l  l+g ++ ++   s ++++++l+f+g+l+lvl+l+  v+  l++++    y+   +p+R+++ fi++ +iYl +++
  EPX73178.1  17 AYLGVAILWKPEFVIESGLSALIGASMDLKPLVSDANNQPALSFIGILFLVLSLMHTVAH-LQHNV---LYFSAMIPFRAIFDFIFTGFIYLKKDH 108
                 468999*************************************************97665.55555...488899*****************9875 PP

  == domain 2  score: 26.7 bits;  conditional E-value: 2e-10
        Ilm1 131 eLknrvvftfaflEmmfwfwvfvtLreErrevlar 165
                  L n+v+ftfaf+ +m+ fw++ +L+e++ +++++
  EPX73178.1 109 VLSNNVTFTFAFCDLMWQFWLYASLNEDKAKFAKK 143
                 599**************************998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1140  (0.0635841); expected 358.6 (0.02)
Passed bias filter:                      452  (0.0252106); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1180.30
//
Query:       EPX73179.1  [L=1676]
Description: proteasome component [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.3e-60  202.9   9.7    1.7e-31  109.4   0.1    3.2  3  Ecm29          Proteasome stabiliser
    1.9e-08   34.8   1.2      0.029   15.0   0.0    5.3  5  Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
    4.1e-05   23.5   0.8         27    5.4   0.0    6.9  7  HEAT           HEAT repeat
     0.0063   16.9   0.0         22    5.5   0.0    5.2  4  HEAT_2         HEAT repeats
  ------ inclusion threshold ------
      0.023   14.9   0.1        9.8    6.5   0.0    3.7  3  RICTOR_V       Rapamycin-insensitive companion of mTOR, domai
       0.11   12.1   1.8          1    8.9   0.1    3.2  3  CLASP_N        CLASP N terminal


Domain annotation for each model (and alignments):
>> Ecm29  Proteasome stabiliser
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.5   1.4   2.5e-31   7.4e-28       3     137 ..      11     140 ..       9     150 .. 0.93
   2 !  109.4   0.1   5.9e-35   1.7e-31     207     495 ..     172     440 ..     151     441 .. 0.89
   3 ?   -0.7   0.1      0.14   4.3e+02     311     368 ..    1141    1217 ..    1064    1277 .. 0.71

  Alignments for each domain:
  == domain 1  score: 97.5 bits;  conditional E-value: 2.5e-31
       Ecm29   3 kvelRlalAdtdekLeklLskfLpplLlklasphasvRkkVieilqhinkriksrpsikLPveaLlkqyketeasslvrnfsllyiekgidRlsaeerk 101
                   e++lalA++ e++e+l+s +L+p+Llkl sp++ vR+k i+i +h+++ri+s ++i+LP+ aL+kqy e+ +++l ++f + +i+ g  Rl+++  +
  EPX73179.1  11 GAEFKLALAKSSESFESLISVYLAPILLKLDSPYEPVRNKTITIANHVMTRITSETNIRLPMLALVKQYIEA-NQALRKRFLVAFISIGKARLPPSPDV 108
                 579********************************************************************8.888*********************** PP

       Ecm29 102 ellpkllkgiskkpsqhqarlfnlllklLgklklpp 137
                 +ll + l++++++p      l+nl ++lL+ ++++p
  EPX73179.1 109 DLLQVCLSHVNNHPI----VLLNLTIRLLNMIRPVP 140
                 *******99986665....89********9988665 PP

  == domain 2  score: 109.4 bits;  conditional E-value: 5.9e-35
       Ecm29 207 eeleetKlailkflasgaftdeerevlpallvasadsdssvsdraeelLKrlsv..dledealvdkLfslflgs...keeskispaspalrlkIlslLs 300
                  +  e++ ++l+ l+++   +++     a++ as+d+ ++v+++a++l + ++   d+e+++ v+ L ++ l +   +  s +  ++++lr k l++L+
  EPX73179.1 172 PKTVEYRKGVLNWLEKSEW-PKTW-NWLAYFFASSDTHKEVAQLADDLVRNTNGspDIENKNHVEILLDIVLDDfyvEYLSLKFSIPVTLRNKALQYLL 268
                 45679999**********9.6665.677777888******************9999**************9987888777888899************* PP

       Ecm29 301 kSvlaaansfpaniqvifeslygsgless.KLrslllqFinwvarhgsskelkkiapvllsglrklidsqgwpepeknssaseelrslaYealGlLakr 398
                 +S +a +n  p+++++i        le+   L+s l+qF++w+  +++ + l++ a  +l+ + ++++++        + ++e lr++ Y+++GlLak+
  EPX73179.1 269 RSNIACTN--PKSMNCIK-----LILEAPpTLQSKLIQFTRWISANADPSVLRPRAAGILDDIFNILSNS--------TISNELLRGFLYTSIGLLAKS 352
                 *******6..****9999.....44577779************************************932........344679*************** PP

       Ecm29 399 apslvredlsliefLFdsLeeeesevrvsIqeALssllsafkeleseaskekLeellleyleadeeesaersvryvavkyanalfpfsdveaRyili 495
                 + +lv   +sl++ L+++L+ e+++vrv+I+e+Ls +l+ fk+    +s  +L  ++ +yl     +  ++ +    ++y+  +fpf+  ++R++++
  EPX73179.1 353 NSDLV--STSLLSTLLSALQVESPDVRVAIDESLSIILPFFKNF---HSPYELLPIIEKYLI----TTPNSPAASSSLRYLLVAFPFEFLPSRFLCL 440
                 ****9..78*********************************76...5579**********6....78899999999999999*************8 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.14
       Ecm29  311 paniqvifeslygsgless.KLrslllqFinwvarhgsske..................lkkiapvllsglrklids 368 
                   ++i++   + +++gl++s K+ s+++ F+ ++++   ++                   l ++ p++++ +++++ +
  EPX73179.1 1141 IQTIENTSLNTTDTGLSRSrKIMSIAVPFLLKCCHEDAKDIqsfsystitelvkftnpaLTPFVPSIIEIMLDYLTK 1217
                  34444433344466777667888888888888777766444455555555555555555555555555555555554 PP

>> Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       2.1   6.2e+03       9      54 ..     340     387 ..     337     393 .. 0.77
   2 !    5.8   0.0    0.0069        21       3      54 ..     761     813 ..     759     819 .. 0.90
   3 !    6.5   0.0    0.0042        12      50      88 ..     868     908 ..     841     913 .. 0.85
   4 !   15.0   0.0   9.6e-06     0.029      21      95 ..    1061    1136 ..    1048    1138 .. 0.90
   5 ?    0.5   0.0      0.32   9.7e+02      21      77 ..    1159    1215 ..    1146    1226 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 2.1
  Vac14_Fab1_bd   9 gLaavaialekk..ikeyleeivkpvlkcfsDkdsrvRyyacEslyni 54 
                    g+  ++i+l +k  ++ +  ++++++l++++ ++  vR    Esl  i
     EPX73179.1 340 GFLYTSIGLLAKsnSDLVSTSLLSTLLSALQVESPDVRVAIDESLSII 387
                    56667888776644666778999999**99999999999888888655 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0069
  Vac14_Fab1_bd   3 rkggligLaavaialekk.ikeyleeivkpvlkcfsDkdsrvRyyacEslyni 54 
                    r  ++i+L  v i+l++   ++ +e i++++  + +D++  + + ++Es+ n 
     EPX73179.1 761 RIQAMITLSHVPISLNEPfDHDLIEMILNTIYLTYHDDSPDILFASAESMANF 813
                    67789***********996678999*************************986 PP

  == domain 3  score: 6.5 bits;  conditional E-value: 0.0042
  Vac14_Fab1_bd  50 slyniakvakge..vlkllneifdalvklvaDsdesvksga 88 
                     ly i+k +k +   ++ +n+i++++   + D d  ++++a
     EPX73179.1 868 WLYYIVKFCKCQayTFERFNDIYHTFLTFLVDLDDFIQDTA 908
                    59*****98765116789****************9998876 PP

  == domain 4  score: 15.0 bits;  conditional E-value: 9.6e-06
  Vac14_Fab1_bd   21 ikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvak.gevlkllneifdalvklvaDsdesvksgaelldrll 95  
                     +k++ ++++++ l+++sD + rvR   + sl  +   +   e + +l+ei+ + ++ + D +esv++++ +l +ll
     EPX73179.1 1061 LKSHRQNLISSSLNSMSDYSWRVRESGVNSLVDLLSNVPvLEYIDQLQEIWRMSYRTLDDIKESVRTASFTLCKLL 1136
                     678899**************************987655516899*************************9998887 PP

  == domain 5  score: 0.5 bits;  conditional E-value: 0.32
  Vac14_Fab1_bd   21 ikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalvklv 77  
                     ++++++  v+ +lkc++++ + +  ++  ++  ++k ++ ++  ++ +i +++   +
     EPX73179.1 1159 SRKIMSIAVPFLLKCCHEDAKDIQSFSYSTITELVKFTNPALTPFVPSIIEIMLDYL 1215
                     567888889999*****99999**999999999999999999888888888776554 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       2.7   8.2e+03       3      18 ..      35      49 ..      33      52 .. 0.83
   2 ?    4.8   0.1     0.014        42       1      28 [.     361     388 ..     361     391 .. 0.84
   3 ?    0.2   0.0      0.43   1.3e+03       2      28 ..     788     814 ..     787     817 .. 0.80
   4 ?   -1.8   0.0       1.8   5.4e+03       9      31 .]     854     876 ..     851     876 .. 0.86
   5 !    5.4   0.0     0.009        27       8      30 ..    1075    1097 ..    1073    1098 .. 0.85
   6 ?    1.3   0.0      0.18   5.4e+02       2      29 ..    1167    1194 ..    1166    1196 .. 0.77
   7 ?    1.6   0.0      0.15   4.5e+02       1      27 [.    1433    1459 ..    1433    1462 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 2.7
                HHHHHHHT-SSHHHHH CS
        HEAT  3 PlllkllsDpspeVRe 18
                P+llk l +p   VR 
  EPX73179.1 35 PILLK-LDSPYEPVRN 49
                999**.69***99995 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.014
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgala 28 
                 ll +ll++l+ +sp+VR a  ++L  ++
  EPX73179.1 361 LLSTLLSALQVESPDVRVAIDESLSIIL 388
                 7999*************99877776665 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.43
                 HHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgala 28 
                 l+++    +D+sp++  a+a++++++a
  EPX73179.1 788 LNTIYLTYHDDSPDILFASAESMANFA 814
                 556544469*************99997 PP

  == domain 4  score: -1.8 bits;  conditional E-value: 1.8
                 HT-SSHHHHHHHHHHHHHHHHCS CS
        HEAT   9 lsDpspeVReaAakaLgalaevl 31 
                  +++ p  R+a+ + L  +++++
  EPX73179.1 854 SKSSRPLLRKASSLWLYYIVKFC 876
                 56788999********9999987 PP

  == domain 5  score: 5.4 bits;  conditional E-value: 0.009
                  HHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT    8 llsDpspeVReaAakaLgalaev 30  
                   +sD s++VRe+ +++L++l+++
  EPX73179.1 1075 SMSDYSWRVRESGVNSLVDLLSN 1097
                  567779**************986 PP

  == domain 6  score: 1.3 bits;  conditional E-value: 0.18
                  HHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT    2 lPlllkllsDpspeVReaAakaLgalae 29  
                  +P+llk+++ ++ ++ + +  ++++l++
  EPX73179.1 1167 VPFLLKCCHEDAKDIQSFSYSTITELVK 1194
                  79****8665666699988888888887 PP

  == domain 7  score: 1.6 bits;  conditional E-value: 0.15
                  HHHHHHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT    1 llPlllkllsDpspeVReaAakaLgal 27  
                  +l ++ ++l+ + ++ R+ Aa +L  +
  EPX73179.1 1433 ILEIIKSNLEATQWDLRRPAAATLLSF 1459
                  7889999**************999766 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.5   0.0    0.0074        22      29      58 ..     358     387 ..     334     422 .. 0.70
   2 ?    1.2   0.0      0.16   4.9e+02       4      31 ..     748     782 ..     731     816 .. 0.51
   3 ?   -0.5   0.0      0.54   1.6e+03      37      58 ..    1073    1094 ..    1036    1116 .. 0.79
   4 ?    1.7   0.0      0.11   3.4e+02      30      77 ..    1431    1485 ..    1422    1494 .. 0.68

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0074
      HEAT_2  29 npealpaLvellededpavRraaaeaLgai 58 
                 ++++l +L+++l+ e+p+vR a+ e+L+ i
  EPX73179.1 358 STSLLSTLLSALQVESPDVRVAIDESLSII 387
                 457788899999999999999888888765 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.16
      HEAT_2   4 LlqalendpdpevrraairaLg....rignp...e 31 
                  ++++++ +d+ +r++a ++L     ++++p   +
  EPX73179.1 748 IVNVAKSEKDTTLRIQAMITLShvpiSLNEPfdhD 782
                 34444455555556666666655544444444443 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.54
      HEAT_2   37 vellededpavRraaaeaLgai 58  
                  ++ ++d +++vR+  +++L+ +
  EPX73179.1 1073 LNSMSDYSWRVRESGVNSLVDL 1094
                  57789999****9999999755 PP

  == domain 4  score: 1.7 bits;  conditional E-value: 0.11
      HEAT_2   30 pealpaLvellededpavRraaaeaL.gai......gdpealpaLkelldddddd 77  
                  +e+l+++ + le + ++ Rr aa +L + +      +++e++ +L   +++ +++
  EPX73179.1 1431 DEILEIIKSNLEATQWDLRRPAAATLlSFVhssrlnDSEEVYTLLVTKMKERSWP 1485
                  5789999999999999999988887733333333333577888888877766555 PP

>> RICTOR_V  Rapamycin-insensitive companion of mTOR, domain 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0     0.027        80      27      60 ..     319     354 ..     304     357 .. 0.86
   2 ?    6.5   0.0    0.0033       9.8      20      53 ..     736     769 ..     724     774 .. 0.85
   3 ?   -2.3   0.0       1.8   5.4e+03      20      45 ..     969     997 ..     960    1007 .. 0.71

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.027
    RICTOR_V  27 divedivelaeespvls..lRGtafyvLglisstee 60 
                  i++di+++  +s++ +  lRG ++  +gl++++++
  EPX73179.1 319 GILDDIFNILSNSTISNelLRGFLYTSIGLLAKSNS 354
                 78999******99988666*************9875 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0033
    RICTOR_V  20 ielldeydivedivelaeespvlslRGtafyvLg 53 
                  ++l+  d++e+iv++a++ + ++lR  a+  L+
  EPX73179.1 736 KQYLHLKDVIETIVNVAKSEKDTTLRIQAMITLS 769
                 5688888*******************99999887 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 1.8
    RICTOR_V  20 ielldey...divedivelaeespvlslR 45 
                 ++l +e+   d+v +++++a++ +v++ R
  EPX73179.1 969 CSLASESgnpDLVYSFLSIANTNSVWQSR 997
                 44555546668999999999999999876 PP

>> CLASP_N  CLASP N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1      0.14   4.3e+02      50      99 ..     740     791 ..     726     797 .. 0.80
   2 ?    8.9   0.1   0.00035         1      16      86 ..    1076    1145 ..    1063    1212 .. 0.72
   3 ?   -3.3   0.0       1.8   5.4e+03      94     172 ..    1432    1509 ..    1422    1521 .. 0.56

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.14
     CLASP_N  50 clkqlleailkalss.Lrttlsstgchllkelaiqlkeqldpm.veillptL 99 
                 +lk+++e i++ ++s   ttl  +++ +l+ + i l+e +d+  +e++l+t+
  EPX73179.1 740 HLKDVIETIVNVAKSeKDTTLRIQAMITLSHVPISLNEPFDHDlIEMILNTI 791
                 4788888888877652679999999999999999999999987688888775 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00035
     CLASP_N   16 etelnwdaReknilklrslikgnvpedaveelleclkqlleailkalssLrttlsstgchllkelaiqlke 86  
                   ++ +w+ Re+ + +l  l+++    +++++l e+++ +   + +   s+rt+ s t+c+ll + +iq  e
  EPX73179.1 1076 MSDYSWRVRESGVNSLVDLLSNVPVLEYIDQLQEIWRMSYRTLDDIKESVRTA-SFTLCKLLARAVIQTIE 1145
                  5789*************9999888899**********7777777777788877.5589******9998543 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 1.8
     CLASP_N   94 illptLlkllgdtKkiisqnanqalaallsnas..fsprilqvlsvalqdKnvqpReysaiwLkilltrfeshkskleasl 172 
                   +l+++   l +t    +  a+++l +++ +     s+++ ++l + +++++   +ey ++ L +l ++ +    +++a++
  EPX73179.1 1432 EILEIIKSNLEATQWDLRRPAAATLLSFVHSSRlnDSEEVYTLLVTKMKERSWPGKEYLLESLVQLAIKCP---GYINATK 1509
                  45555555555555555555555555555444411245567777777777777777777777777776666...5555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1676 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       703  (0.0392102); expected 358.6 (0.02)
Passed bias filter:                      507  (0.0282782); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.97u 0.33s 00:00:01.30 Elapsed: 00:00:00.50
# Mc/sec: 10063.49
//
Query:       EPX73180.1  [L=206]
Description: PPPDE peptidase family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-33  116.1   0.0    1.9e-33  115.5   0.0    1.3  1  Peptidase_C97  PPPDE putative peptidase domain
     0.0012   19.2   0.0     0.0018   18.6   0.0    1.3  1  LRAT           Lecithin retinol acyltransferase


Domain annotation for each model (and alignments):
>> Peptidase_C97  PPPDE putative peptidase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.5   0.0   2.1e-37   1.9e-33       3     144 ..       3     139 ..       1     145 [. 0.93

  Alignments for each domain:
  == domain 1  score: 115.5 bits;  conditional E-value: 2.1e-37
                    EEEEEEETT...TTHHHHHHHHHHSS-----EEEEEEETTEEEE--T......T-SEEESTT-STT-.S-SEEEEEEEE---HHHHHHHHHHHHTT CS
  Peptidase_C97   3 velivyDlsldkkglarrvyptllGkkieGiyhtgvevygleyafggkekee.gGifelkpgttsegakpresieigeTevteeevraileelsse 97 
                     +++vyDl+++      + ++++lG    Giyhtg+++ g+eya+g++  ++ +G+f + p+   eg+++r+si +  +++++ e+++i+ +ls+e
     EPX73180.1   3 AYINVYDLMQSFP---LSRIAWTLGL---GIYHTGFVLGGREYAYGAHAIPNaTGVFITLPKPPLEGCRWRCSIPLPPCTLSKSEIDEIITRLSKE 92 
                    68*******5555...55578889*9...********************9999**********9******************************** PP

                    --GGG-BTTTB-HHHHHHHHHHHHHS----HHHHTHHHHHHTSHHHH CS
  Peptidase_C97  98 ytgdkYnLiskNCnhFtdelvdfLtgkkiPewinrlarivlstptvk 144
                    +tg++Y L+s+NCnhFtd++++ Lt+ +iP ++nrl++ +l++p+++
     EPX73180.1  93 FTGTSYSLLSQNCNHFTDAIAKALTNTSIPPFLNRLSKVGLTFPSIT 139
                    *****************************************999865 PP

>> LRAT  Lecithin retinol acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0     2e-07    0.0018      72     120 ..      62     111 ..      45     117 .. 0.81

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 2e-07
                 TTSEEEE--HHH.HCT----HHHHHHHHHHHTT-E-SCGHHCHHHHHHHH CS
        LRAT  72 agdklrvneksd.skaeslpneeviqrAeelvGeveYsllsnNCEhFvty 120
                 +g+++r+      ++ ++ + +e+i r  +    ++Yslls+NC hF   
  EPX73180.1  62 EGCRWRCSIPLPpCTLSKSEIDEIITRLSKEFTGTSYSLLSQNCNHFTDA 111
                 5666666655554667788999*****99988889************865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (206 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       521  (0.0290591); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.31s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 1396.39
//
Query:       EPX73181.1  [L=282]
Description: delta-1-pyrroline-5-carboxylate reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.2e-34  117.3   2.9    6.8e-34  116.2   2.9    1.6  1  P5CR_dimer     Pyrroline-5-carboxylate reductase dimerisation
    2.7e-11   43.9   0.7    1.8e-10   41.3   0.2    2.6  3  F420_oxidored  NADP oxidoreductase coenzyme F420-dependent
  ------ inclusion threshold ------
      0.097   12.6   0.1       0.21   11.6   0.1    1.6  1  RnfC_N         RnfC Barrel sandwich hybrid domain


Domain annotation for each model (and alignments):
>> P5CR_dimer  Pyrroline-5-carboxylate reductase dimerisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.2   2.9   1.1e-37   6.8e-34       1     101 [.     177     278 ..     177     280 .. 0.97

  Alignments for each domain:
  == domain 1  score: 116.2 bits;  conditional E-value: 1.1e-37
                 CCHHHHHHHHTTTHHHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHCHS.HHHHHHHH--TTSHHHHHHHHHHHTTHHHHHHHHHHHHHH CS
  P5CR_dimer   1 EkqldavtalsGsgpAyvflliealadagvklGlsreeArelaaqtvaGaaklllese.paelrdkvtspgGtTiaglkeleegglraavieaveaaak 98 
                 Ek++da+ta++GsgpA+v+++iea++d+gv++G++ ++A+elaaqt+ G+++++l+++ pa++r+ v++p+G+Ti gl +le+g++r+++++ +e+a+k
  EPX73181.1 177 EKLIDAATAMCGSGPAFVATMIEAMTDGGVMMGIPFAQAQELAAQTMVGTGQMVLQGQhPAKIRNDVSTPAGCTISGLLALEDGKIRSTIARGIEQATK 275
                 899***************************************************98889***************************************9 PP

                 HHH CS
  P5CR_dimer  99 rsk 101
                  ++
  EPX73181.1 276 TAS 278
                 876 PP

>> F420_oxidored  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.3   0.2     3e-14   1.8e-10       3      97 .]       5     114 ..       3     114 .. 0.88
   2 ?   -3.4   0.0       2.6   1.6e+04      36      57 ..     135     156 ..     128     168 .. 0.52
   3 ?   -2.5   0.0       1.3   8.1e+03      68      81 ..     209     222 ..     195     232 .. 0.63

  Alignments for each domain:
  == domain 1  score: 41.3 bits;  conditional E-value: 3e-14
                    EEETTSHHHHHHHHHHHHTTS.-GGCEEEEEESSCCCHHHHHHHHC..............-EEECECHHHHHHH-SEEEE-S-HHHHHHHHHHC.G CS
  F420_oxidored   3 giiGaGnmgealasgllaaga.qpheivvansrnpekaeelaeelg..............vkvtavdneeaaeeadvvvlavkpedveevlsel.a 82 
                    +++G+G mg+al+ g+  + + q++++   n + p++  +  + ++              ++vta +n + a+ +dv++l++kp+ +eevls+  +
     EPX73181.1   5 CVLGCGTMGKALLTGIFDSIKeQDQQVS-KNVSVPDRFYACVKFAQeardieklfgetvgISVTAEENVQKAKASDVLLLSCKPQGAEEVLSAPgM 99 
                    689*************999778899999.889999987554444444449999999****9999999************************99889 PP

                    HHHHTTSEEEEESSS CS
  F420_oxidored  83 kdalkgklvisvlag 97 
                    k+alkgkl++s+lag
     EPX73181.1 100 KEALKGKLILSILAG 114
                    *************97 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2.6
                    CCCHHHHHHHHC-EEECECHHH CS
  F420_oxidored  36 pekaeelaeelgvkvtavdnee 57 
                    p++a  ++e+++v + a ++ e
     EPX73181.1 135 PNTASRIRESMSVLCPAPNATE 156
                    5556666666664444433333 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 1.3
                    -S-HHHHHHHHHHC CS
  F420_oxidored  68 avkpedveevlsel 81 
                     +++++++e++++ 
     EPX73181.1 209 GIPFAQAQELAAQT 222
                    55555555555554 PP

>> RnfC_N  RnfC Barrel sandwich hybrid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   3.5e-05      0.21      30      76 ..     208     254 ..     194     263 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 3.5e-05
      RnfC_N  30 lvlplsqhiGapakplvkvgdkVlkGqkiaeaegfvsapvhasvsGt 76 
                 + +p++q    +a+ +v  g+ Vl+Gq  a+ ++ vs+p  + +sG 
  EPX73181.1 208 MGIPFAQAQELAAQTMVGTGQMVLQGQHPAKIRNDVSTPAGCTISGL 254
                 55999***************************9988**999999995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (282 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1995.17
//
Query:       EPX73182.1  [L=113]
Description: DNA-directed RNA polymerase II complex subunit Rpb9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.3e-12   45.4   1.2    5.3e-12   45.4   1.2    3.0  3  TFIIS_C          Transcription factor S-II (TFIIS)
    1.1e-11   44.4   1.6    1.1e-11   44.4   1.6    2.6  3  RNA_POL_M_15KD   RNA polymerases M/15 Kd subunit
    0.00077   19.5   4.9       0.12   12.4   0.5    2.2  2  DUF3716          Protein of unknown function (DUF3716)
      0.002   18.1   3.0        0.1   12.7   0.1    2.2  2  Elf1             Transcription elongation factor Elf1 like
  ------ inclusion threshold ------
      0.012   15.6   8.7      0.077   13.0   0.4    2.6  2  DZR              Double zinc ribbon
      0.038   13.9   0.2        1.4    8.8   0.1    2.1  2  DUF866           Eukaryotic protein of unknown function (DUF8
        0.8    9.7  11.7       0.24   11.4   3.5    2.6  2  Zn_Tnp_IS1595    Transposase zinc-ribbon domain
        2.6    8.5   8.7         37    4.8   0.3    3.8  4  zf-IS66          zinc-finger binding domain of transposase IS
        3.6    8.0   8.3        1.9    8.9   0.8    2.6  2  Lar_restr_allev  Restriction alleviation protein Lar
        4.4    7.6  10.6        2.2    8.5   0.2    3.3  3  zinc_ribbon_13   Nucleic-acid-binding protein containing Zn-r
        7.5    6.4  10.1        4.1    7.2   3.3    3.1  3  Zn_Tnp_IS1       InsA N-terminal domain


Domain annotation for each model (and alignments):
>> TFIIS_C  Transcription factor S-II (TFIIS)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.5     0.068   1.1e+02      25      36 ..       1      12 [.       1      13 [. 0.84
   2 ?    1.8   0.0      0.14   2.2e+02       3      11 ..      29      37 ..      25      43 .. 0.71
   3 !   45.4   1.2   3.3e-15   5.3e-12       2      38 ..      74     110 ..      73     111 .. 0.95

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.068
     TFIIS_C 25 mtvfykCtkCgh 36
                m+ f  C++C++
  EPX73182.1  1 MSNFQYCIECNN 12
                678899****97 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.14
     TFIIS_C  3 CpkCgsrea 11
                C +C+  e+
  EPX73182.1 29 CRNCDYSEV 37
                777776665 PP

  == domain 3  score: 45.4 bits;  conditional E-value: 3.3e-15
     TFIIS_C   2 kCpkCgsreayffqlQtRsaDEpmtvfykCtkCghrW 38 
                 +Cp+C+++ea+f+q++ R++D  mt+ y+C+ Cg+ +
  EPX73182.1  74 ECPRCHHQEAVFYQMHSRRGDSRMTLVYVCAGCGFAY 110
                 8*********************************865 PP

>> RNA_POL_M_15KD  RNA polymerases M/15 Kd subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.4   1.6   6.8e-15   1.1e-11       1      31 [.       4      36 ..       4      40 .. 0.94
   2 ?   -1.7   0.3       1.7   2.7e+03       4       7 ..      75      78 ..      70      81 .. 0.74
   3 ?    2.1   0.0      0.11   1.9e+02      21      32 ..      99     111 ..      88     113 .] 0.71

  Alignments for each domain:
  == domain 1  score: 44.4 bits;  conditional E-value: 6.8e-15
                    EEBESTTTSBEEEEECSCCCE..EEESSSS-EE CS
  RNA_POL_M_15KD  1 lkFCpkCgNlLlpkedkegkn..feCrqCgYee 31
                    ++ C +C+N+L+p+edk +++  ++Cr+C+Y e
      EPX73182.1  4 FQYCIECNNMLYPREDKVTRIlrLACRNCDYSE 36
                    589****************************86 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.7
                    ESTT CS
  RNA_POL_M_15KD  4 CpkC 7 
                    Cp C
      EPX73182.1 75 CPRC 78
                    6666 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.11
                     E.EEESSSS-EEE CS
  RNA_POL_M_15KD  21 n.feCrqCgYeep 32 
                       + C+ Cg  ++
      EPX73182.1  99 LvYVCAGCGFAYE 111
                     2588****98887 PP

>> DUF3716  Protein of unknown function (DUF3716)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.4   0.00074       1.2      24      52 ..       3      37 ..       1      41 [. 0.85
   2 !   12.4   0.5   7.6e-05      0.12      12      50 ..      72     109 ..      67     113 .] 0.81

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00074
     DUF3716 24 pFeeCvvv......easekakllkgaCanClygkq 52
                +F+ C+ +      ++ + ++ l+ aC nC y++ 
  EPX73182.1  3 NFQYCIECnnmlypREDKVTRILRLACRNCDYSEV 37
                79999999999999778888999*******99875 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 7.6e-05
     DUF3716  12 pepCtrCrrgkgpFeeCvvveasekakllkgaCanClyg 50 
                 +++C rC++++  F +  + ++ + + +l   Ca C + 
  EPX73182.1  72 EKECPRCHHQEAVFYQMHS-RRGDSRMTLVYVCAGCGFA 109
                 567*****9999**75555.588889999*******886 PP

>> Elf1  Transcription elongation factor Elf1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.1   0.4    0.0068        11      24      55 ..       7      36 ..       2      49 .. 0.80
   2 !   12.7   0.1   6.1e-05       0.1      20      56 ..      71     111 ..      60     113 .] 0.82

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0068
        Elf1 24 CpfCnheksvevkldkkekiaevsCkvCgesf 55
                C  Cn+   +  + dk ++i ++ C++C  s 
  EPX73182.1  7 CIECNNM--LYPREDKVTRILRLACRNCDYSE 36
                8888887..8888999999*********9754 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 6.1e-05
        Elf1  20 tkFdCpfCnheksvevkldkkek....iaevsCkvCgesfe 56 
                 t+ +Cp+C+h+++v  +++ +++    + +  C  Cg  +e
  EPX73182.1  71 TEKECPRCHHQEAVFYQMHSRRGdsrmTLVYVCAGCGFAYE 111
                 5568**************99998777666667999987765 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.4   4.7e-05     0.077      11      40 ..       3      39 ..       1      43 [. 0.83
   2 ?    5.4   2.7     0.011        18       8      35 ..      68     107 ..      60     112 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 4.7e-05
         DZR 11 darfCseCgtklkavaa......edrCpsCgek.vdp 40
                + ++C eC++ l + ++        +C +C+++ v +
  EPX73182.1  3 NFQYCIECNNMLYPREDkvtrilRLACRNCDYSeVAA 39
                679*********866669*************986655 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.011
         DZR   8 lppdarfCseCgtklkavaa............edrCpsCg 35 
                 lp   + C++C ++     +             ++C  Cg
  EPX73182.1  68 LPRTEKECPRCHHQEAVFYQmhsrrgdsrmtlVYVCAGCG 107
                 5666777888888743333345667777888788888887 PP

>> DUF866  Eukaryotic protein of unknown function (DUF866)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.027        44      86     112 ..      17      41 ..       7      52 .. 0.70
   2 ?    8.8   0.1   0.00086       1.4       8      68 ..      50     106 ..      43     110 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.027
                 EEGGTS-EEEEEEEEESEEEEEE---S CS
      DUF866  86 aedsgkfktilefdcrGlelvefkpeg 112
                 +ed  k ++il++ cr ++  e  +++
  EPX73182.1  17 RED--KVTRILRLACRNCDYSEVAATS 41 
                 344..6678899999999888776665 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00086
                 EESEEEEE--T...T--EEEEEEETTSS.-EEEEEEE-TT-BEE-TTSS-EESEEE--SSS CS
      DUF866   8 lenvtslepadeeedfeytfkvkctsCreehpkevsisreekveisgsrgeanfvvkcklc 68 
                 ++nv+ l+++ +++ ++yt+  ++++C   h++e ++ +  +     +     +v+ c +c
  EPX73182.1  50 TSNVEGLHFS-QDAATDYTLPRTEKECPRCHHQEAVFYQMHSRR---GDSRMTLVYVCAGC 106
                 58*******8.689*************99999999887766653...33345777778777 PP

>> Zn_Tnp_IS1595  Transposase zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   1.2      0.07   1.1e+02      20      30 ..      28      38 ..       3      47 .. 0.67
   2 ?   11.4   3.5   0.00015      0.24      20      44 ..      74     107 ..      67     109 .. 0.80

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.07
  Zn_Tnp_IS1595 20 vCPhCgsrkay 30
                    C +C ++++ 
     EPX73182.1 28 ACRNCDYSEVA 38
                   47777666555 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00015
  Zn_Tnp_IS1595  20 vCPhCgsrkayrikt.........rglfqCkeCr 44 
                     CP+C++++a +++            ++ C+ C+
     EPX73182.1  74 ECPRCHHQEAVFYQMhsrrgdsrmTLVYVCAGCG 107
                    6*******88877777788888877789999997 PP

>> zf-IS66  zinc-finger binding domain of transposase IS66
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0      0.16   2.6e+02       3      24 ..       6      26 ..       5      27 .. 0.78
   2 ?    4.8   0.3     0.023        37      35      46 .]      22      33 ..      20      33 .. 0.85
   3 ?    4.6   0.1     0.027        43       1      10 [.      72      81 ..      72      94 .. 0.80
   4 ?    1.9   0.1      0.18     3e+02      40      46 .]     101     107 ..      96     110 .. 0.73

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.16
     zf-IS66  3 tCpcCGgllkpigedrvreeld 24
                 C +C+       ed+v+++l 
  EPX73182.1  6 YCIECNNM-LYPREDKVTRILR 26
                6999*984.4889998999885 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.023
     zf-IS66 35 hirpkyaCpcCe 46
                +++ ++aC++C+
  EPX73182.1 22 TRILRLACRNCD 33
                68899******6 PP

  == domain 3  score: 4.6 bits;  conditional E-value: 0.027
     zf-IS66  1 prtCpcCGgl 10
                ++ Cp C+++
  EPX73182.1 72 EKECPRCHHQ 81
                6789999984 PP

  == domain 4  score: 1.9 bits;  conditional E-value: 0.18
     zf-IS66  40 yaCpcCe 46 
                 y C  C+
  EPX73182.1 101 YVCAGCG 107
                 6677775 PP

>> Lar_restr_allev  Restriction alleviation protein Lar
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   1.4     0.085   1.4e+02      28      50 ..      26      46 ..       2      53 .. 0.70
   2 ?    8.9   0.8    0.0012       1.9       4      36 ..      73     108 ..      70     113 .] 0.77

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.085
  Lar_restr_allev 28 cvyCadCgastpwfkiaedeaea 50
                       +C +C +  +++  ++++ ++
       EPX73182.1 26 RLACRNCDY--SEVAATSKVYRH 46
                     679*****9..566666555555 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0012
  Lar_restr_allev   4 kpCPfCggravlersqrvvaeigq...cvyCadCga 36 
                      k CP C +++ ++ +   + + +    +  Ca Cg 
       EPX73182.1  73 KECPRCHHQEAVFYQMHSRRGDSRmtlVYVCAGCGF 108
                      89*****99999877666655555788889999997 PP

>> zinc_ribbon_13  Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.1       2.7   4.5e+03       2       8 ..       7      13 ..       6      22 .. 0.67
   2 ?    8.5   0.2    0.0013       2.2      36      48 ..      27      39 ..      20      53 .. 0.80
   3 ?    3.2   2.0     0.061        99       2      17 ..      75      90 ..      74     111 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 2.7
  zinc_ribbon_13  2 CpKCgnt 8 
                    C+ C+n 
      EPX73182.1  7 CIECNNM 13
                    6667664 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0013
  zinc_ribbon_13 36 vsCknCgYtelYk 48
                      C+nC Y+e+  
      EPX73182.1 27 LACRNCDYSEVAA 39
                    68********854 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.061
  zinc_ribbon_13  2 CpKCgnteaevkevaa 17
                    Cp+C ++ea   +++ 
      EPX73182.1 75 CPRCHHQEAVFYQMHS 90
                    9999999988777765 PP

>> Zn_Tnp_IS1  InsA N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.3      0.36   5.8e+02      28      34 ..      26      32 ..      21      33 .. 0.85
   2 ?    1.0   0.0      0.23   3.7e+02      13      19 ..      39      46 ..      35      52 .. 0.78
   3 ?    7.2   3.3    0.0025       4.1       8      28 ..      75      96 ..      73     107 .. 0.72

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.36
  Zn_Tnp_IS1 28 RfrCrdC 34
                R  Cr+C
  EPX73182.1 26 RLACRNC 32
                778**99 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.23
  Zn_Tnp_IS1 13 std.VyRh 19
                +t  VyRh
  EPX73182.1 39 ATSkVYRH 46
                4555***9 PP

  == domain 3  score: 7.2 bits;  conditional E-value: 0.0025
  Zn_Tnp_IS1  8 CPrCsstd.VyRhGkstagHeR 28
                CPrC+ ++ V+ +  s  g  R
  EPX73182.1 75 CPRCHHQEaVFYQMHSRRGDSR 96
                *******999877777666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       732  (0.0408277); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.42u 0.27s 00:00:00.69 Elapsed: 00:00:00.44
# Mc/sec: 775.40
//
Query:       EPX73183.1  [L=713]
Description: medial ring protein Mid2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.6e-08   33.2   0.0    1.8e-07   31.6   0.0    1.9  1  PH        PH domain


Domain annotation for each model (and alignments):
>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.6   0.0   9.8e-12   1.8e-07       2     102 ..     592     692 ..     591     695 .. 0.87

  Alignments for each domain:
  == domain 1  score: 31.6 bits;  conditional E-value: 9.8e-12
                 EEEEEEEEETSSSSCSEEEEEEEEETTEEEEESSTTCTTESSEEEEEESTTEEEEEEEC........TTSSSSTSEEEEEESTSSSTEEEEEEESSHHH CS
          PH   2 vkeGwLlkkgsgkkkswkkrwfvLkdsellyykndksekdkepkgsislsncevvevva........tedpkrkfcfelriverngsrtyllqasseee 92 
                  ++G+L ++g++    w++r+f L +s+l+ +++      k+++ +i+ls+++   +++        + +   +  f+++++  n+ + + ++a++ ee
  EPX73183.1 592 LCDGYLCQQGGDCP-YWRRRYFQLIGSKLVAFQPF----TKTRRATIELSEATHIVDDNhysdeeelEGYLYFETGFRIIFK--NS-DYIDFYAETVEE 682
                 579***********.********************....9**********99987666689877774447777777777888..66.99********** PP

                 HHHHHHHHHH CS
          PH  93 rkeWikaiqs 102
                 ++eW++++++
  EPX73183.1 683 KEEWMSTLRQ 692
                 *******987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (713 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       854  (0.0476323); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.33s 00:00:00.99 Elapsed: 00:00:00.51
# Mc/sec: 4216.63
//
Query:       EPX73184.1  [L=656]
Description: stress activated MAP kinase interacting protein Sin1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-45  153.8   0.3    2.5e-44  150.9   0.0    2.6  3  CRIM      SAPK-interacting protein 1 (Sin1), middle CRIM doma
    2.1e-28   98.8   2.1    1.2e-27   96.3   0.3    2.9  3  SIN1_PH   SAPK-interacting protein 1 (Sin1), Pleckstrin-homol
    0.00021   21.8   0.3    0.00021   21.8   0.3    2.0  2  SIN1      Stress-activated map kinase interacting protein 1 (


Domain annotation for each model (and alignments):
>> CRIM  SAPK-interacting protein 1 (Sin1), middle CRIM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       1.8   1.1e+04     111     123 ..     164     176 ..     154     196 .. 0.60
   2 !  150.9   0.0   4.1e-48   2.5e-44       1     141 []     245     382 ..     245     382 .. 0.97
   3 ?   -0.9   0.0      0.28   1.7e+03      54     101 ..     449     480 ..     421     505 .. 0.56

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 1.8
                 CCC-TTSCCHHH- CS
        CRIM 111 Paldrtrpiskfs 123
                 P+ld ++++s+fs
  EPX73184.1 164 PKLDNNQAVSRFS 176
                 4555555555554 PP

  == domain 2  score: 150.9 bits;  conditional E-value: 4.1e-48
                 S--SSS---SSSS.-SSSCC.CCCGCCTTTT.-T-EEECCE-TT-SSTTS.---CCC-SSSCTCCCCCCCCCCCHCHT-SS-SS...SCGGCSTTCCEE CS
        CRIM   1 kSlLsalLeakke.ksenpl.eeyaalsgkgessslklkiyvpfskkpsvkplevkvrkdatvaevIGlaLykyveekrepeldeeleeeklnvnrwtL 97 
                 +S+L +l+e++++ +++npl +++a +sg++e+++l+lkiy+pfs+++s +p++v++r+++ v+e+IG++L++y++++  p ++    +e +n+n w+L
  EPX73184.1 245 ESALRKLFENANSsTQQNPLaDNFAGFSGRAEPNPLRLKIYCPFSENAS-QPMHVELRQSILVFEAIGYILFEYISQSIMPLIE----DEAQNPNYWNL 338
                 59*******98887899********************************.7*********************************....7889******* PP

                 CCE-CT--EECCCCCC-TTSCCHHH-BSEEEEEE-SCHHHCCHC CS
        CRIM  98 riveeDgevdedFPaldrtrpiskfsfdelaLveaseeeveene 141
                 rive+Dge d+dFPaldrt p++kfsfd +aLv+a++++++en+
  EPX73184.1 339 RIVEDDGELDDDFPALDRTGPLAKFSFDAFALVKATNAQIKENQ 382
                 ******************************************97 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.28
                 CC-SSSCTCCCCCCCCCCCHCHT-SS-SS...SCGGCSTTCCEECCE- CS
        CRIM  54 kvrkdatvaevIGlaLykyveekrepeldeeleeeklnvnrwtLrive 101
                 +v+k+++ a v+  +++                 ++l+  ++tLri++
  EPX73184.1 449 EVSKNTRFAMVLNQVCWM----------------KQLERFKYTLRIAD 480
                 444444443333333333................44555555666554 PP

>> SIN1_PH  SAPK-interacting protein 1 (Sin1), Pleckstrin-homology
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.35   2.1e+03      16      59 ..     188     235 ..     182     262 .. 0.61
   2 ?    0.1   0.0      0.16   9.4e+02      48      76 ..     451     479 ..     399     538 .. 0.74
   3 !   96.3   0.3     2e-31   1.2e-27       2     109 ..     549     650 ..     548     651 .. 0.95

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.35
     SIN1_PH  16 aksevtLaIdgekieidpvknkkka....tkfwaksqKtvsyhidsvv 59 
                 ++s+  L I++  i i   +n  k+    t+f + ++   +++ d   
  EPX73184.1 188 SSSDESLQISDGEIGIYTYQNPIKNeeeeTEFGSFEKSREQVDNDALR 235
                 567889999999999987555443333336666654444445555555 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.16
     SIN1_PH  48 qKtvsyhi..dsvvhckiserksskalfriv 76 
                 +K + + +  ++v + k++er ++  ++ri 
  EPX73184.1 451 SKNTRFAMvlNQVCWMKQLERFKY--TLRIA 479
                 444444433389999999999888..88886 PP

  == domain 3  score: 96.3 bits;  conditional E-value: 2e-31
     SIN1_PH   2 lyksyrvyikqkm..laksevtLaIdgekieidpvknkkkatkfwaksqKtvsyhidsvvhckiserksskalfrivvkksssefKrydfeadsakeAe 98 
                 +y+++ v+ +q++  ++++e++LaIdge+i+i+p+++++    +++   Kt+s+h+ s++ ck+s++++   +f++++++ ++e+Krydfe  s+ eA+
  EPX73184.1 549 TYQEFIVWKRQPVsfMGRHERLLAIDGEYIHIMPSESRN----IFET-PKTTSIHVGSIIICKQSKKSPC--NFKLIISR-NRETKRYDFEVLSSLEAA 639
                 7*************9**********************54....4455.**********************..********.****************** PP

     SIN1_PH  99 eIvnkinkile 109
                  Iv++i+++++
  EPX73184.1 640 VIVTRIRTLMS 650
                 ********997 PP

>> SIN1  Stress-activated map kinase interacting protein 1 (SIN1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.3   3.6e-08   0.00021      43     123 ..      80     158 ..      56     177 .. 0.71
   2 ?   -3.3   0.1         2   1.2e+04      26      50 ..     221     245 ..     210     266 .. 0.49

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 3.6e-08
        SIN1  43 sdtkkvegsggqversevefsdypglDlsddedvgssqsydIqsysevgihrfrsnT.aqklErldiakrkaakiksikyed 123
                 ++++  + ++g+  +s+ e+sdy+ +D s  +d+   ++ + +s+++v+++r   nT +  ++ l++a+++  k  +++ + 
  EPX73184.1  80 RENASRNLKDGPDINSNFEDSDYAVSDFSGFSDMVGHENPCLFSFTKVPMRR---NTrSESEDNLNQAQKNTRKGMESQLSH 158
                 334444555566667789**********************************...662344667777777777665555544 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 2
        SIN1  26 ksqeavaedtasalrkpsdtkkveg 50 
                 +++++ ++ +++alrk  +  k+++
  EPX73184.1 221 SFEKSREQVDNDALRKVPSIVKQPE 245
                 4444444444444444433333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (656 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       831  (0.0463495); expected 358.6 (0.02)
Passed bias filter:                      480  (0.0267723); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.29s 00:00:00.90 Elapsed: 00:00:00.58
# Mc/sec: 3427.65
//
Query:       EPX73185.1  [L=434]
Description: transcription factor TFIIE alpha subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.1e-15   55.5   0.9      8e-15   54.6   0.2    1.9  2  TFIIE_alpha    TFIIE alpha subunit
     0.0022   17.5   1.1     0.0093   15.5   1.1    2.2  1  TF_Zn_Ribbon   TFIIB zinc-binding
  ------ inclusion threshold ------
      0.074   13.0   0.1       0.18   11.7   0.1    1.7  1  zf-C4_ClpX     ClpX C4-type zinc finger
      0.075   13.0   0.1       0.16   12.0   0.1    1.5  1  Zn_Tnp_IS1595  Transposase zinc-ribbon domain
      0.083   12.8   3.5       0.29   11.1   1.1    2.7  2  DUF4428        Domain of unknown function (DUF4428)
       0.27   11.7   0.7        1.4    9.5   0.1    2.2  2  zf-H2C2_2      Zinc-finger double domain


Domain annotation for each model (and alignments):
>> TFIIE_alpha  TFIIE alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.6   0.2   2.7e-18     8e-15       1     102 [.      10     115 ..      10     118 .. 0.96
   2 ?   -2.7   0.0       1.8   5.5e+03      28      61 ..     155     186 ..     152     203 .. 0.58

  Alignments for each domain:
  == domain 1  score: 54.6 bits;  conditional E-value: 2.7e-18
                  HHHHHHHHHCS-HHHHHHHHHHHCTTSEBHHHHHHHHTS-HHHHHHHHHHHHHCTSEEEEEEEE....TTTEEEEEEEEEECCCHCCCHHHHHHHHHH CS
  TFIIE_alpha   1 ellkevvrkfygeeavlvldvLlekgevteedlakelkidlnelrklLnrLyearlvkykrrrd....eekswykyywrinyeklvdvvkrkleevvk 94 
                  +l+k ++r fy+  ++  +d++l+++ +t+e+ a +++i ++e r l  +L+e+rl  ++ r +    ++ ++++ y++i+y   +d +k++++++vk
   EPX73185.1  10 RLIKMIMRAFYETRHIIFMDAVLRHSALTDEQTAILMGIPIKECRFLAGKLREDRLLAIQSRAEvkegQQRQIQTTYFYIDYCFTIDSIKWRMHQLVK 107
                  699*********************************************************999999889999************************** PP

                  HHHHHHCC CS
  TFIIE_alpha  95 kLeeklek 102
                   +e+ ++ 
   EPX73185.1 108 TVEDRMRS 115
                  ***98875 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1.8
                  EBHHHHHHHHTS-HHHHHHHHHHHHHCTSEEEEE CS
  TFIIE_alpha  28 vteedlakelkidlnelrklLnrLyearlvkykr 61 
                  +++++ + e+   ++ l++l+ +    ++++  +
   EPX73185.1 155 LKDDEESAEMMSSQKRLGRLMGQVS--KIIEALK 186
                  5555555555555666666554432..3444444 PP

>> TF_Zn_Ribbon  TFIIB zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   1.1   3.1e-06    0.0093       1      32 [.     122     158 ..     122     163 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 3.1e-06
                   EEETTTTCEECHEE.....TSTTCEEESSSSBEEEEC CS
  TF_Zn_Ribbon   1 ykCPnCgstnlveD.....pergelvCtdCGlVledn 32 
                   y+CP C  ++  +D     + +g+++C+dC + l d+
    EPX73185.1 122 YVCPFCQKKYSSLDvlslvTPEGTFLCSDCATELKDD 158
                   89******98655555566667********8888876 PP

>> zf-C4_ClpX  ClpX C4-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   5.9e-05      0.18       2      32 ..     123     154 ..     122     157 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 5.9e-05
  zf-C4_ClpX   2 rCSFCgksesevkklI.agpngvyICdeCvel 32 
                  C FC k+ s  + l    p+g + C++C  +
  EPX73185.1 123 VCPFCQKKYSSLDVLSlVTPEGTFLCSDCATE 154
                 6*******99988888788999*******876 PP

>> Zn_Tnp_IS1595  Transposase zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   5.2e-05      0.16      18      45 ..     121     153 ..     118     154 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 5.2e-05
  Zn_Tnp_IS1595  18 gfvCPhCgsr.kayrikt....rglfqCkeCrk 45 
                    g vCP+C+++ ++  + +     g f C++C +
     EPX73185.1 121 GYVCPFCQKKySSLDVLSlvtpEGTFLCSDCAT 153
                    679*****98866666657779*********75 PP

>> DUF4428  Domain of unknown function (DUF4428)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   1.1   9.6e-05      0.29       2      42 ..     124     164 ..     123     171 .. 0.71
   2 ?   -2.1   0.0       1.3   3.8e+03      33      50 ..     403     419 ..     401     420 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 9.6e-05
     DUF4428   2 CaiCgkKigllkr..lkleDg.yvCkdClkKlseflsdvkikki 42 
                 C+ C+kK + l    l + +g ++C dC+ +l   ++d ++ ++
  EPX73185.1 124 CPFCQKKYSSLDVlsLVTPEGtFLCSDCATEL---KDDEESAEM 164
                 9*********8444488888879*******98...333333333 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.3
     DUF4428  33 flsdvkikkiltledIke 50 
                 +++d+k+ k++ ++dI+e
  EPX73185.1 403 SNDDTKA-KHVIINDINE 419
                 5678887.9999999998 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.1   0.00046       1.4      14      25 ..     121     132 ..     101     133 .. 0.77
   2 ?   -0.4   0.0      0.64   1.9e+03      10      21 ..     141     152 ..     138     153 .. 0.84

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00046
   zf-H2C2_2  14 pyeCplCdkaFk 25 
                  y Cp+C k+++
  EPX73185.1 121 GYVCPFCQKKYS 132
                 39********97 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.64
   zf-H2C2_2  10 tgekpyeCplCd 21 
                 t+e  + C+ C+
  EPX73185.1 141 TPEGTFLCSDCA 152
                 7788899****6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (434 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1612  (0.0899102); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.60u 0.29s 00:00:00.88 Elapsed: 00:00:00.49
# Mc/sec: 2673.17
//
Query:       EPX73186.1  [L=365]
Description: WD repeat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.4e-06   28.9   0.1        0.1   13.5   0.7    3.7  3  WD40         WD domain, G-beta repeat
    0.00025   21.3   0.0       0.61   10.4   0.0    3.7  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.11   9.6e+02       2      28 ..      82     108 ..      81     110 .. 0.75
   2 !   13.5   0.7   1.2e-05       0.1       5      38 .]     169     204 ..     166     204 .. 0.84
   3 !    9.0   0.0   0.00031       2.8       9      37 ..     217     247 ..     208     248 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.11
                 EEEEEEESSSSEEEEEEETTSSEEEEE CS
        WD40   2 qclrtltGHssvtslafspdgawlasG 28 
                 +++r+l+ H+ + +l+f+ ++  +a+ 
  EPX73186.1  82 KPVRELELHFEIKGLSFNGEHLVIATT 108
                 78999999*88****777666666665 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 1.2e-05
                 EEEESS.SSEEEEEEETTSSEEEEE.ETTSEEEEEE CS
        WD40   5 rtltGH.ssvtslafspdgawlasG.sdDgtvriWd 38 
                  ++++H s +++l  s++g+ +as+ s    +r+W+
  EPX73186.1 169 SIISAHdSEISCLGISQSGSKIASSsSSGTLIRVWN 204
                 5789**777*************976446*******8 PP

  == domain 3  score: 9.0 bits;  conditional E-value: 0.00031
                 SS..SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   9 GH..ssvtslafspdgawlasGsdDgtvriW 37 
                 G    s++ l+fspd  +la++s + t++++
  EPX73186.1 217 GYqyASINQLSFSPDELLLACASTKETLHVF 247
                 554456**************99988888876 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.14   1.3e+03      40      68 ..       3      30 ..       2      64 .. 0.67
   2 ?   -1.1   0.0      0.26   2.3e+03      41      80 ..      93     130 ..      75     147 .. 0.56
   3 !   10.4   0.0   6.8e-05      0.61      35      79 ..     172     217 ..     129     224 .. 0.78
   4 !    5.6   0.0    0.0022        19      40      67 ..     222     249 ..     216     259 .. 0.80

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.14
  ANAPC4_WD40 40 evrsLaWkpdgklLavaysdgevrlldae 68
                 +v+s++ ++d + L v+ ++g  ++++ +
   EPX73186.1  3 KVNSISLNQDASCLSVSLDNGY-KIFQLN 30
                 6778888888888888887763.444444 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.26
  ANAPC4_WD40  41 vrsLaWkpdgklLavaysdgevrlld.aesgkvvhslsvks 80 
                  +++L++  +g+ L++a+   ++ l++  +  k+v+++++++
   EPX73186.1  93 IKGLSF--NGEHLVIATTS-KLFLYHfTHAMKLVRTIDTQN 130
                  555544..45555555443.233333033344555555544 PP

  == domain 3  score: 10.4 bits;  conditional E-value: 6.8e-05
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdge.vrlldaesgkvvhslsvk 79 
                  +++dse+++L  +++g+ +a + s g+ +r+ +ae+g+ v++++ +
   EPX73186.1 172 SAHDSEISCLGISQSGSKIASSSSSGTlIRVWNAETGEKVSEFRRG 217
                  679**********************9548***********998765 PP

  == domain 4  score: 5.6 bits;  conditional E-value: 0.0022
  ANAPC4_WD40  40 evrsLaWkpdgklLavaysdgevrllda 67 
                  ++++L+++pd+ lLa a  + ++++++ 
   EPX73186.1 222 SINQLSFSPDELLLACASTKETLHVFSL 249
                  6888899999999998888888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (365 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       395  (0.0220313); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 2575.85
//
Query:       EPX73187.1  [L=803]
Description: phosphatidylinositol 3-kinase Pik3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.5e-67  226.6   1.8    3.1e-67  225.6   1.8    1.5  1  PI3Ka           Phosphoinositide 3-kinase family, accessory d
    2.5e-49  168.3   0.2    1.2e-46  159.6   0.0    2.8  2  PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
    2.1e-21   76.3   0.1    3.8e-21   75.5   0.1    1.4  1  PI3K_C2         Phosphoinositide 3-kinase C2
  ------ inclusion threshold ------
      0.099   11.9   0.0       0.19   11.0   0.0    1.4  1  DUF4135         Domain of unknown function (DUF4135)


Domain annotation for each model (and alignments):
>> PI3Ka  Phosphoinositide 3-kinase family, accessory domain (PIK domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  225.6   1.8   6.9e-71   3.1e-67       2     181 ..     261     447 ..     260     451 .. 0.98

  Alignments for each domain:
  == domain 1  score: 225.6 bits;  conditional E-value: 6.9e-71
                 -S-SSCHHHHHHHHHCHS-TTS---HHHHHHHHHTHHHHCTSGGGHHHHHTTS-SSSHHHHHHHHHHHTTSHHTTHHHHTTTTSTTS--HHHHHHHHHH CS
       PI3Ka   2 dlkpdekerdeleaiiakdPltkltaeekeliwkfryylknnkkaltklLqsvkwseesevkealelldsWaeididdaLeLLdskfkdesvreyavkv 100
                 dlkp++k+r+ele+i++++P+ +l+ eek+liwkfryyl++nkka+tk+L+sv ws+++ev++al+lldsW++ididdaLeLL+++fk++ vr+yav++
  EPX73187.1 261 DLKPNSKIRKELENIMSYPPSDDLSLEEKDLIWKFRYYLTRNKKAMTKFLKSVMWSDNTEVNQALSLLDSWTQIDIDDALELLSPSFKNPTVRAYAVSR 359
                 799************************************************************************************************ PP

                 HHHSHHHHHHHHHHHHHHHHGGS.......SSSSSHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHCHHHHH CS
       PI3Ka 101 LekasdeelllYllQLVqalkye.......pikdsalaefLlkralknkrlghfffWyLkseiedkevserfksllesylrklskslk 181
                 Le+as+eel+lYllQLVqal+y+       + k s+la+fL++ra++++++g++++WyL +ei+d++ ++ f+s++  + ++lsks +
  EPX73187.1 360 LETASNEELSLYLLQLVQALRYDisagakeNPKPSPLASFLVSRAVSSPSIGNDLYWYLVVEIQDEPSNKLFSSVMFLLQQELSKSSE 447
                 **********************************************************************************999876 PP

>> PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       1.8     8e+03     216     241 ..     289     314 ..     269     320 .. 0.77
   2 !  159.6   0.0   2.7e-50   1.2e-46       2     249 ..     543     748 ..     542     749 .. 0.96

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 1.8
                     HHHHHHHHHHHHHTHHHHHHHHHHHH CS
  PI3_PI4_kinase 216 resceealealrrdqnlltrllkkav 241
                     +++ ++++  l r+++ +t++lk  +
      EPX73187.1 289 KDLIWKFRYYLTRNKKAMTKFLKSVM 314
                     46788899999999999999999854 PP

  == domain 2  score: 159.6 bits;  conditional E-value: 2.7e-50
                     EEEEEECSSCHHHHHHHHHHHHHHHHHHHHTTTTCCCT-------EEESSSSEEEEE--TTEEEHHHHHHHHHHHCTTSTCHHHHHHHHHCHCHC CS
  PI3_PI4_kinase   2 sagiykvgddlrqdelivqvfklmdeelskennpkrrklalktysviplgrkcgiielvassetaaslldeklekkgvpptasveslrvaldkkk 96 
                     +++i+k+gddlrqd+l++q+++lmd++l+ke+++++    lk+y+++++g+ +g +++v+ s+t+as+l e++                      
      EPX73187.1 543 YPIIFKNGDDLRQDQLVIQILTLMDQLLKKEKLDLH----LKPYRILATGPTHGAVQFVP-SKTLASILAEYR---------------------- 610
                     899********************************9....********************.59*********9...................... PP

                     CHHHHHCCHHHHHHTSSTTHHHHHHHHHSSSHHHHHHH.......HHHHHHHHHHHHHHHHHHT-TT--TTTEEEETTTSEEEESSTTTCCTCSH CS
  PI3_PI4_kinase  97 lkkekklkfekrtalkpksgllqeFvkkspsaeewlea.......rkqFvrslaklsvldyilgngDRhldNilvdktsgklihIDfGlilpdew 184
                                        ++l ++ +++p+ ++ ++        +++++rs+a+++v++y+lg+gDRhldN+l+ +++g+++h DfG+il++++
      EPX73187.1 611 ------------------GSVLAYLREHNPDNDNNTNTygihpkaMDNYIRSCAGYCVITYLLGVGDRHLDNLLI-TEDGHFFHADFGYILGRDP 686
                     ..................789***********9888878888999******************************.******************* PP

                     CSSSS-.SSSSS.S-THHHHHHT..STTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCCSSC CS
  PI3_PI4_kinase 185 kllpfpqekvPf.rltrelvlai..dpskdeglfresceealealrrdqnlltrllkkavkdglilwe 249
                     kl+       P  +l +e+v+ +   +s  ++ f+++c++++ alr+ +nl+++l++++v++++++++
      EPX73187.1 687 KLFS------PAmKLSKEMVEGMggYNSPFYQQFKSYCYTTFTALRKSSNLILNLFSLMVDANIPDIK 748
                     ****......677**********999***************************************986 PP

>> PI3K_C2  Phosphoinositide 3-kinase C2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.5   0.1   8.4e-25   3.8e-21       6     139 ..      35     182 ..      31     183 .. 0.90

  Alignments for each domain:
  == domain 1  score: 75.5 bits;  conditional E-value: 8.4e-25
                 EEEEEEECTTEESSEEE.E-S-SETT.........TTTEEEEEEEEEEECCCS-TTEEEEEEEEEEEECTC.EEE.-EEEEEEEESC-TTSCCGGCEEE CS
     PI3K_C2   6 yvevqlyhggkqlclpvqstklksfs........fksikwnewltfpiqisdLPrsarLvitiwevkgkekseev.eplgwvnlsLFdkkgiLrqGkqk 95 
                 ++++ql+++ ++l+  vq+ +++++         + ++  n w++f i + +LP+++ + i+ w+ +  ++   + e++g +++ LFd++++LrqG qk
  EPX73187.1  35 MCTFQLFSNSEPLS-LVQRFFVSKTPnksvlpteLPRFARNDWVNFEISVAELPANSYFLISMWKPSLHDEI--KyEFVGTTRYALFDENKLLRQGLQK 130
                 699***********.56577777666699****9************************************97..558********************** PP

                 EEECCS-----SHH.........SSSCHCCCCCCCHTTSSS-CCCCHTTTCC CS
     PI3K_C2  96 Lklwtsketdgsvet........edelnrlekllkkyergqvekvewldrlt 139
                 + ++t  ++  + +           e++rl++ll k + g++ +  wld+l+
  EPX73187.1 131 IPIYTLNDKSTKDNAltstesgkVHEIERLDQLLFKLQLGDIPSTAWLDELS 182
                 **99877555544446689***99*************************997 PP

>> DUF4135  Domain of unknown function (DUF4135)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   4.2e-05      0.19      91     174 ..     565     681 ..     541     702 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 4.2e-05
     DUF4135  91 llewlnkka.gsldlkvlkvldr.geYgWvefvehq..............................pcaseeeverfYrraGallallyllggtDlhee 157
                 l+++l kk+   l lk +++l    ++g v+fv+++                                   ++++++ r + +++ ++yllg+ D h +
  EPX73187.1 565 LMDQLLKKEkLDLHLKPYRILATgPTHGAVQFVPSKtlasilaeyrgsvlaylrehnpdndnntntYGIHPKAMDNYIRSCAGYCVITYLLGVGDRHLD 663
                 44555555557777777777655357777777777777777777777777777777777777777655667889999999******************* PP

     DUF4135 158 Nl.iasgeqpvliDlEtl 174
                 Nl i   ++ +  D+  +
  EPX73187.1 664 NLlITEDGHFFHADFGYI 681
                 **7777777776666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (803 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       538  (0.0300073); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.68u 0.28s 00:00:00.96 Elapsed: 00:00:00.47
# Mc/sec: 5175.51
//
Query:       EPX73188.1  [L=408]
Description: hypothetical protein SOCG_00943 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00021   20.2   0.0    0.00036   19.5   0.0    1.3  1  DLIC      Dynein light intermediate chain (DLIC)
  ------ inclusion threshold ------
      0.068   13.6   1.4        1.3    9.5   0.0    2.7  3  APG12     Ubiquitin-like autophagy protein Apg12


Domain annotation for each model (and alignments):
>> DLIC  Dynein light intermediate chain (DLIC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0     4e-08   0.00036     212     300 ..     194     290 ..     188     302 .. 0.79

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 4e-08
        DLIC 212 ekehdyrdehldfiqshirrfclqy.Gaallytsvke...dknldllykylvh....kiyglpfrtPalvvekdavliPaGwdnekkiailyenlqt 300
                 +k +   d+  dfiq++ir++ l    ++l+y s      d    ll  yl +     + + + ++ +  ++ d +liP  wd ++ki+ +   + t
  EPX73188.1 194 NKTFSMNDDMKDFIQQFIRSLLLLIpMSSLMYLSTNPcswDNFKSLLNLYLLNdnpiSLQENHHTITSNTIDNDRLLIPPCWDTMQKIQNVNLKFCT 290
                 5778889999**********987762679***9986422256667899999863332467788999999*******************877666655 PP

>> APG12  Ubiquitin-like autophagy protein Apg12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.0   0.00015       1.3      31      69 ..     109     148 ..      92     166 .. 0.81
   2 ?    2.2   0.1     0.027   2.4e+02      13      50 ..     188     227 ..     181     253 .. 0.62
   3 ?   -3.4   0.0       1.6   1.4e+04      63      76 ..     297     310 ..     293     315 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00015
                 HHHHHHHHCT-.SSSS-E.EEETTTB---TTSBHHHHHHH CS
       APG12  31 vilflkkeLklqaseslf.lYvnnsFaPsPdeeveeLyec 69 
                 +  f+++ L+l+  + l+ +Yvn  F+ +P    ++L e 
  EPX73188.1 109 LRFFVHQSLRLHGLDALWvIYVNYVFSENPKGFAKDLLEV 148
                 56689*******99999637***********999999876 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.027
                 ---S--EEEEETTSBHHHHH.HHHHHHCT-..SSSS-EEE CS
       APG12  13 pilkkkklkvnasdtvakvi.lflkkeLkl.qaseslflY 50 
                 p++ ++  + +++d ++ +i +f++  L l ++s+ ++l 
  EPX73188.1 188 PQIDDENKTFSMNDDMKDFIqQFIRSLLLLiPMSSLMYLS 227
                 6777777788888888876615777665541455544443 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 1.6
                 HHHHHHHH-BTTEE CS
       APG12  63 veeLyecfgtdkkl 76 
                  ++L++ f+t++ +
  EPX73188.1 297 TKNLHQVFETNDLI 310
                 57888888888744 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (408 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       713  (0.039768); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.28s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 2699.94
//
Query:       EPX73189.1  [L=874]
Description: Tel2/Rad-5/Clk-2 family protein Tel2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.1e-26   92.5   0.0    5.7e-26   91.1   0.0    1.8  1  Telomere_reg-2  Telomere length regulation protein


Domain annotation for each model (and alignments):
>> Telomere_reg-2  Telomere length regulation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.1   0.0   3.2e-30   5.7e-26       1     109 []     513     624 ..     513     624 .. 0.99

  Alignments for each domain:
  == domain 1  score: 91.1 bits;  conditional E-value: 3.2e-30
  Telomere_reg-2   1 pvYlkdllelLrdkddyekieaaLksaeeLirrkad...eveenaveLataLltledkfdienfeelrlnalvallvatpekvaeylteeffsnq 92 
                     p+Y++ l++lL d+++y+k+++aL++a+eLi+rk+    ev+++a+ L+++L++l+d+fd++nf++l+l++l++ll a+pe + + +++ +f ++
      EPX73189.1 513 PKYIQSLCRLLLDTESYDKQKVALEAAPELIQRKSMfgtEVKDHAKWLLEILVGLQDRFDLPNFDRLQLSSLCNLLSACPEICGPEICTILFIGD 607
                     89********************************************************************************************* PP

  Telomere_reg-2  93 yslqqRidiLsvlalaA 109
                     +sl+q+++iLs++a+aA
      EPX73189.1 608 FSLRQKTLILSSIAMAA 624
                     ***************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (874 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       536  (0.0298957); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.25s 00:00:00.94 Elapsed: 00:00:00.56
# Mc/sec: 4720.28
//
Query:       EPX73190.1  [L=454]
Description: mRNP complex [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    0.00077   19.9   5.0    0.00077   19.9   5.0    4.1  4  Spectrin        Spectrin repeat
     0.0024   18.1   1.1     0.0024   18.1   1.1    5.3  6  ABC_tran_CTD    ABC transporter C-terminal domain
  ------ inclusion threshold ------
       0.27   11.3  15.1        1.1    9.3   7.3    3.7  4  Baculo_PEP_C    Baculovirus polyhedron envelope protein, PEP,
       0.36   11.5  30.1       0.31   11.7   4.6    4.4  3  YabA            Initiation control protein YabA
        0.4   11.0  11.3          5    7.4   0.1    4.9  3  WXG100          Proteins of 100 residues with WXG
        0.4   10.6   5.9         12    5.9   0.0    4.5  4  Pox_A_type_inc  Viral A-type inclusion protein repeat
       0.52   10.5  14.9       0.48   10.6   0.7    4.3  3  DUF4363         Domain of unknown function (DUF4363)
        2.8    8.0  22.5        6.3    6.9   0.2    4.3  5  DUF1664         Protein of unknown function (DUF1664)
        5.9    6.8  13.7        4.3    7.3   0.4    4.1  4  GIT_CC          GIT coiled-coil Rho guanine nucleotide exchan
          6    6.3  19.6       0.34   10.4   2.9    3.7  4  Allexi_40kDa    Allexivirus 40kDa protein
        7.9    5.7  19.8       0.98    8.7   3.3    3.0  3  CorA            CorA-like Mg2+ transporter protein
        9.4    5.5  41.3        8.3    5.7   0.4    4.0  3  DUF4407         Domain of unknown function (DUF4407)


Domain annotation for each model (and alignments):
>> Spectrin  Spectrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   5.0   5.2e-07   0.00077       9      89 ..      17      98 ..      13     102 .. 0.92
   2 !    6.6   1.1     0.007        10      48      95 ..     148     196 ..     127     203 .. 0.85
   3 ?   -1.2   1.3       1.9   2.8e+03      37      85 ..     233     254 ..     202     279 .. 0.54
   4 ?    1.0   0.3      0.41   6.1e+02      45      72 ..     396     423 ..     384     437 .. 0.53

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 5.2e-07
                HHHHHHHHHHHHHHHHCCSSC.SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHTTHHHHHHHHHHHHHHH CS
    Spectrin  9 dadeleeWieekeellssedl.gkdleevqallkkhkaleaelaaqqervkalnelaeklldeghsaseeieerleelnerW 89
                 ++el++ i+e +++ s++      + ++ +l++k  +l+ el++ ++   ++ + +++l+++ + + e++++++++ln   
  EPX73190.1 17 ALNELDAKINEVKKQFSEQKEkLGAVRSAGSLQEKNAELRSELDQIRNAQSSIRTSKQALINKVKAQDEALKKKISDLNGLR 98
                6899********99997766669*******************************************************9765 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.007
                 HHHHHHHHHHHHHHHHHHHH.HHTTHTTHHHHHHHHHHHHHHHHHHHHH CS
    Spectrin  48 aelaaqqervkalnelaekl.ldeghsaseeieerleelnerWeeLkel 95 
                  el++ q  v++ +   ++l  + ++++s++++e+  e++++ +e++++
  EPX73190.1 148 TELNTLQASVDTMKSELNELrNQLNDPESKKLSEKFVEIRSQLDEVRQK 196
                 688999999999998888888999999**************99999986 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 1.9
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHTTHHHHHHHHHHH CS
    Spectrin  37 qallkkhkaleaelaaqqervkalnelaeklldeghsaseeieerleel 85 
                  ++l++++++e+e +a                           +r+e++
  EPX73190.1 233 DTQLRAFRTYEREQRA---------------------------KRQEQI 254
                 2334444444444444...........................222222 PP

  == domain 4  score: 1.0 bits;  conditional E-value: 0.41
                 HHHHHHHHHHHHHHHHHHHHHHHHHTTH CS
    Spectrin  45 aleaelaaqqervkalnelaeklldegh 72 
                 ++e  +++ + r+ +l+  +++ ++e  
  EPX73190.1 396 QVESAIEQLKSRIAELKGKQDSATKERI 423
                 4555566666666666544444433332 PP

>> ABC_tran_CTD  ABC transporter C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   2.6     0.026        39       7      59 ..      15      61 ..      11      68 .. 0.65
   2 ?   -0.7   0.0       1.2   1.7e+03      16      33 ..      76      93 ..      71     120 .. 0.77
   3 !   18.1   1.1   1.6e-06    0.0024       9      61 ..     149     201 ..     143     203 .. 0.91
   4 ?   -1.0   0.1       1.5   2.2e+03      36      55 ..     200     220 ..     196     238 .. 0.61
   5 ?   -2.7   2.0       4.8   7.2e+03      17      25 ..     260     268 ..     229     294 .. 0.57
   6 !    9.3   1.5   0.00085       1.3      12      55 ..     396     435 ..     381     440 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.026
  ABC_tran_CTD  7 qreleeleaeIeaLEeeiaeleaeladpelysdpeklaelsaeleeleaeLee 59
                  ++ l el+a+I++  ++ +e  ++l +            l+++ +el++eL++
    EPX73190.1 15 KNALNELDAKINEVKKQFSEQKEKLGAVRS------AGSLQEKNAELRSELDQ 61
                  566778888888888888888888876654......44455555555555543 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 1.2
  ABC_tran_CTD 16 eIeaLEeeiaeleaelad 33
                   I++  ++ ++l ++++d
    EPX73190.1 76 LINKVKAQDEALKKKISD 93
                  577777777777777776 PP

  == domain 3  score: 18.1 bits;  conditional E-value: 1.6e-06
  ABC_tran_CTD   9 eleeleaeIeaLEeeiaeleaeladpelysdpeklaelsaeleeleaeLeely 61 
                   el +l a  + +  e+ el ++l+dpe  + +ek+ e+  +l+e++++ +  y
    EPX73190.1 149 ELNTLQASVDTMKSELNELRNQLNDPESKKLSEKFVEIRSQLDEVRQKQDSYY 201
                   899************************66666***************999887 PP

  == domain 4  score: -1.0 bits;  conditional E-value: 1.5
  ABC_tran_CTD  36 lysdp.eklaelsaeleelea 55 
                   +y+d+ + ++e  a++++l++
    EPX73190.1 200 YYKDQrKMFSERDAQKATLDE 220
                   455554445555555555444 PP

  == domain 5  score: -2.7 bits;  conditional E-value: 4.8
  ABC_tran_CTD  17 IeaLEeeia 25 
                     + E+++ 
    EPX73190.1 260 AREKEKKQV 268
                   333333333 PP

  == domain 6  score: 9.3 bits;  conditional E-value: 0.00085
  ABC_tran_CTD  12 eleaeIeaLEeeiaeleaeladpelysdpeklaelsaeleelea 55 
                   ++e+ Ie+L  +iael  +  +++     e++ ++ +ele++ea
    EPX73190.1 396 QVESAIEQLKSRIAELKGKQDSAT----KERIEKAKKELEKIEA 435
                   789999999999999999888765....6899999999999997 PP

>> Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   2.1     0.011        17      47     118 ..      18      97 ..      10     112 .. 0.52
   2 ?    9.3   7.3   0.00073       1.1      15     126 ..      52     182 ..      45     195 .. 0.75
   3 ?    5.0   1.3     0.016        24      94     120 ..     150     176 ..     136     239 .. 0.67
   4 ?    3.5   0.1     0.044        66      38      75 ..     394     433 ..     358     444 .. 0.48

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.011
  Baculo_PEP_C  47 Lnalsedlksllaeldt...rld..tlltnLtdalnalq...dtlrneLtnlnsiltnLlssvtNinstLnnllqalnnl 118
                   Ln+l+++++++ +++++   +l    ++  L+++ ++l    d++rn+  ++ +    L ++v    ++L+  +++ln+l
    EPX73190.1  18 LNELDAKINEVKKQFSEqkeKLGavRSAGSLQEKNAELRselDQIRNAQSSIRTSKQALINKVKAQDEALKKKISDLNGL 97 
                   33333333333332222222332003344455555555555566666666666666666666666666666666666555 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00073
  Baculo_PEP_C  15 fldLtnvLnairlqnvqilaqlatlldaietqLnalsedlksllaeldt........rldtlltnLtdalnalq......dtlrneLtnln...... 91 
                   + +L   L++ir+ +++i +  ++l+++++ q +al++++++l + l++        +ld  + +L++a+ + +      ++   e+t  n      
    EPX73190.1  52 NAELRSELDQIRNAQSSIRTSKQALINKVKAQDEALKKKISDL-NGLRKtvpykseaDLDRHVRQLQAAVDSGTlkivdeKKYLREITQCNrtrrsf 147
                   5688888899988888888777777777777777777777763.33444466677778888888888888764455888877888999998544444 PP

  Baculo_PEP_C  92 siltnLlssvtNinstLnnllqalnnldlgalsqe 126
                   ++l++L++sv  ++s Ln l + ln  ++ +ls++
    EPX73190.1 148 TELNTLQASVDTMKSELNELRNQLNDPESKKLSEK 182
                   58********************9999888887765 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.016
  Baculo_PEP_C  94 ltnLlssvtNinstLnnllqalnnldl 120
                   l++L++sv  ++s Ln l + ln  ++
    EPX73190.1 150 LNTLQASVDTMKSELNELRNQLNDPES 176
                   333333333333333333333333222 PP

  == domain 4  score: 3.5 bits;  conditional E-value: 0.044
  Baculo_PEP_C  38 tlldaietqLnalsedlksllaeldt....rldtlltnLtda 75 
                   +  +++e+ +++l++++ +l  ++d+    r++++ ++L++ 
    EPX73190.1 394 K--TQVESAIEQLKSRIAELKGKQDSatkeRIEKAKKELEKI 433
                   2..333444444444444444444432222444444444433 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   4.6   0.00021      0.31       4      74 ..      19      88 ..      14      95 .. 0.78
   2 ?    4.1  11.7     0.047        70       6      79 ..     146     224 ..     141     280 .. 0.89
   3 ?    3.2   0.2     0.091   1.4e+02      13      76 ..     397     433 ..     387     451 .. 0.56

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00021
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHXXXXXXXXXXXXXXXXXXXXXX CS
        YabA  4 kelfdkleeleeqleelleeleelkeelaelleenaeLeleneklrerleeeekkekekkkelsegkenLa 74
                +el +k++e+++q++e +e+l+++++   +l e+naeL+ e +++r+ +++ ++++++  ++++   e L+
  EPX73190.1 19 NELDAKINEVKKQFSEQKEKLGAVRS-AGSLQEKNAELRSELDQIRNAQSSIRTSKQALINKVKAQDEALK 88
                46778899999999999999999876.57899****************96666666666666666555554 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.047
                 HHHHHHHHHHHHHHHHHHHHHHHHHH.....HHHHHHHHHHHHHHHHHHHHHXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        YabA   6 lfdkleeleeqleelleeleelkeel.....aelleenaeLeleneklrerleeeekkekekkkelsegkenLarlYee 79 
                  f++l++l+ +++++++el+el+++l     ++l e+  e++ + +++r+++++  k++++  +e +  k  L +lY++
  EPX73190.1 146 SFTELNTLQASVDTMKSELNELRNQLndpesKKLSEKFVEIRSQLDEVRQKQDSYYKDQRKMFSERDAQKATLDELYNQ 224
                 588999999999********999988333335788999999999999999999999999999999999999******86 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.091
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHXXXXXXXXXXXXXXXXXXXXXXXX CS
        YabA  13 leeqleelleeleelkeelaelleenaeLeleneklrerleeeekkekekkkelsegkenLarl 76 
                 +e+ +e+l+++++elk +                           +++++k++++++k++L+++
  EPX73190.1 397 VESAIEQLKSRIAELKGK---------------------------QDSATKERIEKAKKELEKI 433
                 334444444444444433...........................3334444444444444443 PP

>> WXG100  Proteins of 100 residues with WXG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.2     0.099   1.5e+02      12      37 ..      44      69 ..      41      73 .. 0.77
   2 ?    7.4   0.1    0.0034         5      21      66 ..     151     196 ..     147     203 .. 0.91
   3 ?    2.9   0.1     0.084   1.3e+02      20      40 ..     394     414 ..     392     437 .. 0.74

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.099
                HHHHHHHHHHHHHHHHHHHHHHHHHC CS
      WXG100 12 aaarfqkqaeeledelqrlkaevdal 37
                +a ++q++++el++el+++++ ++++
  EPX73190.1 44 SAGSLQEKNAELRSELDQIRNAQSSI 69
                57788888888899988888888776 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0034
                 HHHHHHHHHHHHHHHHCGCGCTHHHCHHHHHHHHHHHHHHHHHHHH CS
      WXG100  21 eeledelqrlkaevdalqsgWsGaaadafqaefeewkqaaqklvda 66 
                 ++l++ ++++k+e+++l+++ +   +++  + f e++ +++++ ++
  EPX73190.1 151 NTLQASVDTMKSELNELRNQLNDPESKKLSEKFVEIRSQLDEVRQK 196
                 579999********************************99999987 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.084
                 HHHHHHHHHHHHHHHHHCGCG CS
      WXG100  20 aeeledelqrlkaevdalqsg 40 
                 ++++e+++++lk+ +++l+++
  EPX73190.1 394 KTQVESAIEQLKSRIAELKGK 414
                 688999999999999999654 PP

>> Pox_A_type_inc  Viral A-type inclusion protein repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0     0.042        63       5      13 ..      86      94 ..      85      95 .. 0.89
   2 ?   -0.0   0.1      0.62   9.3e+02       7      18 ..     161     172 ..     155     173 .. 0.61
   3 ?    5.9   0.0    0.0081        12       3      14 ..     401     412 ..     400     414 .. 0.92
   4 ?   -2.1   0.2       2.8   4.2e+03       7      18 ..     420     431 ..     417     432 .. 0.75

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.042
  Pox_A_type_inc  5 rlRsRIsDL 13
                    +l+ +IsDL
      EPX73190.1 86 ALKKKISDL 94
                    79******9 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.62
  Pox_A_type_inc   7 RsRIsDLErqLs 18 
                     +s+  +L +qL+
      EPX73190.1 161 KSELNELRNQLN 172
                     555556666666 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.0081
  Pox_A_type_inc   3 msrlRsRIsDLE 14 
                     +++l+sRI +L+
      EPX73190.1 401 IEQLKSRIAELK 412
                     78*********8 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 2.8
  Pox_A_type_inc   7 RsRIsDLErqLs 18 
                     ++RI+  +++L+
      EPX73190.1 420 KERIEKAKKELE 431
                     899988788886 PP

>> DUF4363  Domain of unknown function (DUF4363)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   1.8      0.34   5.1e+02      13      61 ..      20      63 ..      12      89 .. 0.50
   2 ?   10.6   0.7   0.00032      0.48       3      50 ..     149     196 ..     147     205 .. 0.89
   3 ?    5.4   0.4     0.013        19       7      48 ..     393     434 ..     388     439 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.34
     DUF4363 13 elsekleeleeaienedweeakekleelekeWekkkkklsifiehdeld 61
                el++k++e++++      +e kekl ++++  + ++k  ++  e d+++
  EPX73190.1 20 ELDAKINEVKKQF-----SEQKEKLGAVRSAGSLQEKNAELRSELDQIR 63
                4444444444333.....3333444444444444444444444444444 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00032
     DUF4363   3 sqnylkkstdelsekleeleeaienedweeakekleelekeWekkkkk 50 
                 + n l+ s+d+++++l+el++++++ ++++  ek+ e++++ ++ + k
  EPX73190.1 149 ELNTLQASVDTMKSELNELRNQLNDPESKKLSEKFVEIRSQLDEVRQK 196
                 678999*********************************999987765 PP

  == domain 3  score: 5.4 bits;  conditional E-value: 0.013
     DUF4363   7 lkkstdelsekleeleeaienedweeakekleelekeWekkk 48 
                 +k+++++  e+l+  +++++ ++ +++ke +e+++ke ek +
  EPX73190.1 393 TKTQVESAIEQLKSRIAELKGKQDSATKERIEKAKKELEKIE 434
                 677778888888888888888888888888888888888865 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   4.6    0.0068        10      48     114 ..      16      84 ..      10      97 .. 0.53
   2 ?    5.2   2.1     0.014        20      48     110 ..      60     120 ..      42     132 .. 0.65
   3 ?    2.6   3.8     0.087   1.3e+02      39      96 ..     153     197 ..     108     233 .. 0.61
   4 ?    0.5   1.0      0.38   5.7e+02      39      88 ..     179     231 ..     175     267 .. 0.55
   5 ?    6.9   0.2    0.0042       6.3      55      93 ..     395     434 ..     381     439 .. 0.57

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0068
     DUF1664  48 kqleqvseslaatkrhLssridrvd..kkldeqkeiskeikeevtevredlseigedvesvkeavegle 114
                 + l+++ ++++++k+++s++ ++++  ++  + +e  +e+++e++++r+  s+i++  +++ + v+  +
  EPX73190.1  16 NALNELDAKINEVKKQFSEQKEKLGavRSAGSLQEKNAELRSELDQIRNAQSSIRTSKQALINKVKAQD 84 
                 445556666666666666665555411344455556666666666666666666665555544444333 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.014
     DUF1664  48 kqleqvseslaatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeav 110
                  q+ + ++s+++ k+ L ++++  d+ l++ +   + +++ v   +   +++++ v+++++av
  EPX73190.1  60 DQIRNAQSSIRTSKQALINKVKAQDEALKKKISDLNGLRKTVPYKS--EADLDRHVRQLQAAV 120
                 2444556889999999999999999888888877777777775432..234555555555555 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.087
     DUF1664  39 lsdavesvskqleqvseslaa.tkrhLssridrvdkkldeqkeiskeikeevtevredl 96 
                 l+  v+++ ++l+++ ++l++   ++Ls++  ++ ++lde+              r++ 
  EPX73190.1 153 LQASVDTMKSELNELRNQLNDpESKKLSEKFVEIRSQLDEV--------------RQKQ 197
                 33333333333333333333312233333333333333333..............3333 PP

  == domain 4  score: 0.5 bits;  conditional E-value: 0.38
     DUF1664  39 lsdavesvskqleqvs...eslaatkrhLssridrvdkkldeqkeiskeikee 88 
                 ls+   ++ +ql++v    +s  + +r++ s+ d   ++lde  +  + i++e
  EPX73190.1 179 LSEKFVEIRSQLDEVRqkqDSYYKDQRKMFSERDAQKATLDELYNQRRGIQKE 231
                 44444455555555542223333344444444455555555555555555554 PP

  == domain 5  score: 6.9 bits;  conditional E-value: 0.0042
     DUF1664  55 eslaatkrhLssridrvdkklde.qkeiskeikeevtevr 93 
                 ++++++ ++L+sri+++  k+d+ +ke +++ k+e+++++
  EPX73190.1 395 TQVESAIEQLKSRIAELKGKQDSaTKERIEKAKKELEKIE 434
                 4455555666666666666665413444555555555544 PP

>> GIT_CC  GIT coiled-coil Rho guanine nucleotide exchange factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   2.5     0.037        55      22      65 ..      15      57 ..      13      72 .. 0.86
   2 ?    0.9   0.0      0.29   4.3e+02      37      54 ..     104     121 ..      86     126 .. 0.81
   3 ?    7.3   0.4    0.0029       4.3      44      66 .]     148     170 ..     130     170 .. 0.89
   4 ?   -2.2   0.1       2.6   3.8e+03      40      57 ..     395     412 ..     393     421 .. 0.63

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.037
      GIT_CC 22 KkalaaseakiqqLlkvNtslsdelrlLQskvqkLqaeNaqlrd 65
                K+al   +aki++++k  ++++++l     +  +Lq+ Na+lr+
  EPX73190.1 15 KNALNELDAKINEVKKQFSEQKEKLGAVR-SAGSLQEKNAELRS 57
                99999999**9999999999999998874.45788888888886 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.29
      GIT_CC  37 kvNtslsdelrlLQskvq 54 
                 k+ + l + +r+LQ  v+
  EPX73190.1 104 KSEADLDRHVRQLQAAVD 121
                 77889999******9987 PP

  == domain 3  score: 7.3 bits;  conditional E-value: 0.0029
      GIT_CC  44 delrlLQskvqkLqaeNaqlrdq 66 
                 +el+ LQ +v+++++e ++lr+q
  EPX73190.1 148 TELNTLQASVDTMKSELNELRNQ 170
                 79*****************9987 PP

  == domain 4  score: -2.2 bits;  conditional E-value: 2.6
      GIT_CC  40 tslsdelrlLQskvqkLq 57 
                 t+ +  +++L s + +L+
  EPX73190.1 395 TQVESAIEQLKSRIAELK 412
                 555666666666666665 PP

>> Allexi_40kDa  Allexivirus 40kDa protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   2.4     0.032        48      57      98 ..      55      95 ..      11     122 .. 0.45
   2 ?    4.0   1.9     0.021        31      58     125 ..      56     122 ..      47     148 .. 0.72
   3 ?   10.4   2.9   0.00023      0.34      75     146 ..     138     209 ..     121     226 .. 0.81
   4 ?    1.2   0.2      0.15   2.2e+02      94     130 ..     397     433 ..     334     450 .. 0.58

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.032
  Allexi_40kDa 57 ishdvdsiinklnpvsllsqttlLselrdalrtltklldklk 98
                  + +++d+i n   ++  +s+++l+++++++ ++l+k++ +l+
    EPX73190.1 55 LRSELDQIRNAQSSI-RTSKQALINKVKAQDEALKKKISDLN 95
                  222223332222222.23333333333333333333333333 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.021
  Allexi_40kDa  58 shdvdsiinklnpvsllsqttlLselrdalrtltklldklksvekklelsaetasdskllkklesiet 125
                    +++d+i n   ++  +s+++l+++++++ ++l+k++ +l+ + k++  + e + d+++ +  ++++ 
    EPX73190.1  56 RSELDQIRNAQSSI-RTSKQALINKVKAQDEALKKKISDLNGLRKTVPYKSEADLDRHVRQLQAAVDS 122
                   56677777776666.77888889999999999999999999999988888888888886655555554 PP

  == domain 3  score: 10.4 bits;  conditional E-value: 0.00023
  Allexi_40kDa  75 sqttlLselrdalrtltklldklksvekklelsaetasdskllkklesietsleelhakldelsssetsese 146
                   +q +   +  ++l+tl+  +d++ks  ++l+++ ++++++kl +k+  i  +l+e+ +k d   + + ++ +
    EPX73190.1 138 TQCNRTRRSFTELNTLQASVDTMKSELNELRNQLNDPESKKLSEKFVEIRSQLDEVRQKQDSYYKDQRKMFS 209
                   444444555578899999*****************************************9998887777655 PP

  == domain 4  score: 1.2 bits;  conditional E-value: 0.15
  Allexi_40kDa  94 ldklksvekklelsaetasdskllkklesietsleel 130
                   +++  ++ k+  ++ + ++ds + +++e  +++le++
    EPX73190.1 397 VESAIEQLKSRIAELKGKQDSATKERIEKAKKELEKI 433
                   2222222222222333333333333333333333333 PP

>> CorA  CorA-like Mg2+ transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   3.3   0.00065      0.98     125     190 ..      16      84 ..      12     122 .. 0.80
   2 ?    5.8   4.0    0.0051       7.6     121     180 ..     151     215 ..     144     247 .. 0.78
   3 ?   -1.0   0.1      0.58   8.6e+02     134     205 ..     401     434 ..     394     443 .. 0.44

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00065
        CorA 125 ellekleeeldeledel.edstkkeilrelaqlrrrlvklrralapnrevlkrlla..kaddklldded 190
                 ++l +l+++++e+ +++ e+++k + +r+   l+++ ++lr+ l + r++ +++ +  +a+ ++++++d
  EPX73190.1  16 NALNELDAKINEVKKQFsEQKEKLGAVRSAGSLQEKNAELRSELDQIRNAQSSIRTskQALINKVKAQD 84 
                 6899***********************************************755554445555555444 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0051
        CorA 121 drlfellekleeeldeledeledstkkeilrelaqlrrrlvkl....rralapnrevlkrlla.k 180
                 ++l + ++++++el+el ++l+d ++k++ ++ +++r +l ++     ++ +++r++++++ a k
  EPX73190.1 151 NTLQASVDTMKSELNELRNQLNDPESKKLSEKFVEIRSQLDEVrqkqDSYYKDQRKMFSERDAqK 215
                 6788999***********************************98887778888888887554432 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 0.58
        CorA 134 ldeledeledstkkeilrelaqlrrrlvklrralapnrevlkrllakaddkllddedkeylrdlldelerll 205
                 +++l +++                                     a +++++ d++ ke+++    ele+++
  EPX73190.1 401 IEQLKSRI-------------------------------------A-ELKGKQDSATKERIEKAKKELEKIE 434
                 44444444.....................................3.3444444444444444444444432 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   6.9     0.011        17     151     226 ..      16      91 ..       8      98 .. 0.61
   2 ?    2.0  20.1     0.073   1.1e+02     130     236 ..     130     242 ..      98     294 .. 0.49
   3 ?    5.7   0.4    0.0056       8.3     188     224 ..     397     435 ..     336     447 .. 0.72

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.011
     DUF4407 151 aaearldalraeaqkeldgtkgtgttgvaGkgpaakekkaqldaaqaelaelkakld.....atarlaalraelaeleaer 226
                 +a ++lda+ +e++k+ +   +++   + G   +a + ++++++++ el+++++  +     ++a +++ +a+ + l++++
  EPX73190.1  16 NALNELDAKINEVKKQFSE--QKE---KLGAVRSAGSLQEKNAELRSELDQIRNAQSsirtsKQALINKVKAQDEALKKKI 91 
                 4556777777777777775..222...677777777777777777777777777733444544444444444444444444 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.073
     DUF4407 130 a........ltaelaeleaqiaalqaeidaaearldalraeaqkeldgtkgtgttgvaGkgpaakekkaqldaaqaelaelkakldatarlaalraela 220
                 +          +++++  ++++ lqa +d+ +++l++lr+++++  + + +++   ++ + ++ ++k++ + + q+++ + ++   ++a+l++l +++ 
  EPX73190.1 130 EkkylreitQCNRTRRSFTELNTLQASVDTMKSELNELRNQLNDPESKKLSEKFVEIRSQLDEVRQKQDSYYKDQRKMFSERDA--QKATLDELYNQRR 226
                 034333322222333333334466666666666666666666666666554333334444444444444433333333333333..3333333333333 PP

     DUF4407 221 eleaerakeraasqaa 236
                 ++++e +++ +a+++ 
  EPX73190.1 227 GIQKEFDTQLRAFRTY 242
                 3333333333333322 PP

  == domain 3  score: 5.7 bits;  conditional E-value: 0.0056
     DUF4407 188 kkaqldaaqaelaelkakld..atarlaalraelaelea 224
                  ++++++++ ++aelk+k d   ++r++++++el+++ea
  EPX73190.1 397 VESAIEQLKSRIAELKGKQDsaTKERIEKAKKELEKIEA 435
                 355666666666666666556666666666666666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (454 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2682  (0.14959); expected 358.6 (0.02)
Passed bias filter:                      515  (0.0287244); expected 358.6 (0.02)
Passed Vit filter:                        86  (0.0047967); expected 17.9 (0.001)
Passed Fwd filter:                        57  (0.00317921); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 1.18u 0.32s 00:00:01.50 Elapsed: 00:00:00.54
# Mc/sec: 2512.84
//
Query:       EPX73191.1  [L=686]
Description: tRNA (cytosine-5-)-methyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.6e-39  133.4   0.0    1.9e-37  128.9   0.0    2.7  1  Methyltr_RsmB-F  16S rRNA methyltransferase RsmB/F
  ------ inclusion threshold ------
       0.02   15.0   0.0       0.04   14.0   0.0    1.5  1  FtsJ             FtsJ-like methyltransferase


Domain annotation for each model (and alignments):
>> Methyltr_RsmB-F  16S rRNA methyltransferase RsmB/F
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.9   0.0   2.1e-41   1.9e-37       3     199 ..     152     417 ..     150     418 .. 0.88

  Alignments for each domain:
  == domain 1  score: 128.9 bits;  conditional E-value: 2.1e-41
                      HH---TT-EEEESS-TTSHHHHHHHH.HTT............TTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CTCCHHHHCC...... CS
  Methyltr_RsmB-F   3 lLapqeeetilDlcaaPGgKTthiae.lmk............nkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg...... 77 
                      +L+ +++ ++lD+caaPG+KT+ ++e l              ++g vvA+da+++R++ +++ +krL+  n+ +++ Da+  +++  +      
       EPX73191.1 152 FLHVKNHHKVLDMCAAPGSKTAQLLEeLHTpadgqetfesllPSGIVVANDADNKRAHMLVHQIKRLNSPNVLIVNHDASFLPHFHVEvdgpng 245
                      7899******************998624321222222222224678**********************************99999888889999 PP

                      .......EEEEEEEE--CCGGGTTT-TCHHHH--HHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEES--STTTTHHHHHHHHHH.-TTEEEESS CS
  Methyltr_RsmB-F  78 .....elfDriLlDaPCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkk.redvelvet 165
                            +fDriL D+PCsg g+ r++ ++    + k+   l++ q ++l+  idll + G lvYsTCs+++ Ene+v++++Lk+ +  v+lv++
       EPX73191.1 246 keksyLKFDRILADVPCSGDGTFRKNISLWNDWTLKTALGLHSTQIKILKRGIDLLASSGRLVYSTCSMNPIENEAVVAAVLKSsKGSVRLVDV 339
                      9999999**********************888899***********************************************972558999999 PP

                      BSTTSTTSSECEEC.............................................TSEEE-TTTTSS-SEEEEEE CS
  Methyltr_RsmB-F 166 elsepkglklgeea.............................................gtlrllPhtenkdgffiakl 199
                        +e  +lk g +                                                +r++Ph++n+ gff+a +
       EPX73191.1 340 -SNEIPELKRGPGVkrwtvcdselnaypsfeslpkelngkmakslwplpeeeltqmgieRCMRVYPHHQNTGGFFVAVF 417
                      .5555555555555679****************************************99999**************987 PP

>> FtsJ  FtsJ-like methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   4.5e-06      0.04      19      58 ..     155     213 ..     138     330 .. 0.68

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 4.5e-06
                 S-TT-EEEECT-TTSHHHHHHCCT........T.......-SEEEEEESSSS......H CS
        FtsJ  19 fkpgktvvDlgaaPGgwsqvllqrl.......ga......kgkvvavDlqpm......a 58 
                 +k+ ++v+D +aaPG+ +  ll++l       ++      +g vva D  +       +
  EPX73191.1 155 VKNHHKVLDMCAAPGSKTAQLLEELhtpadgqETfesllpSGIVVANDADNKrahmlvH 213
                 468899******************95544433003333334777777775542332331 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (686 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       476  (0.0265492); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.43
# Mc/sec: 4762.18
//
Query:       EPX73192.1  [L=702]
Description: cation diffusion family zinc membrane transporter Cis4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.4e-44  152.2   5.8    1.4e-44  152.2   5.8    2.6  2  Cation_efflux  Cation efflux family


Domain annotation for each model (and alignments):
>> Cation_efflux  Cation efflux family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   3.3      0.22   3.9e+03     112     168 ..      71     131 ..      32     221 .. 0.59
   2 !  152.2   5.8   7.9e-49   1.4e-44       2     199 .]     333     613 ..     332     613 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.22
  Cation_efflux 112 vslvvnlalllilrragrklrsaalkaaalhvlgDal...tsl.gvlvsalvillfnlksg 168
                    +s+v ++++++ +  + +++++ ++++++++ l+ ++   +sl   ++++l  +lf++ s+
     EPX73192.1  71 ISFVTQYLGIFSYSYQPFRIQNVLITTISMSLLTISAsefGSLeTLCLCILSYKLFDHRSQ 131
                    4555555555555555666655555555555555333111222122233333334444444 PP

  == domain 2  score: 152.2 bits;  conditional E-value: 7.9e-49
  Cation_efflux   2 ilsllanlilalvelivglltnSlalladafhslsdlvsllllllalklsrkppderfpfGygrlevlgalvsgllllglavfllleaiqklikeg 97 
                    + ++l+nl+++ v++++g++tnSl l++da+h+ +d+++ +++l+a +l + p+++ +pfG+ ++e l ++++g++l+++ ++++ ea  +l+  +
     EPX73192.1 333 FFFFLLNLFYMMVQVFYGFYTNSLGLISDAIHMAFDCIAVFVGLVATVLVKLPSNYAYPFGFAKVEALSGFTNGIFLILISCSIVCEASYRLF--H 426
                    6899*****************************************************************************************..7 PP

  Cation_efflux  98 ereihaglalvvalvslvvnlalllilrragrkl.............................................................. 131
                    ++ ++++ +l+v++++lvvnl+++ ++ ++ ++                                                               
     EPX73192.1 427 PPKMNTDQLLAVSFIGLVVNLVGIVAFNHGHAHGhgscshghqelalpnstndvniyeefnshnhdlqthsivndyqddcrhehshnhshhsglek 522
                    88889999999***********9999887766669************************************************************* PP

  Cation_efflux 132 ..........................rsaalkaaalhvlgDaltslgvlvsalvillfnlksgplaDpvaslligliilysalkllkeslseLl 199
                                              ++ ++++++lh+l Da++s++v+vs l+i++f  ++   +Dp+as++ +++i++s  +l+ +s ++Ll
     EPX73192.1 523 qdfmprvghqshshhhghdhyhhhhsENNNMQGIFLHILADAMGSVAVIVSTLLIKWFSWTG---FDPLASMITAIFIFISVIPLIINSARNLL 613
                    **********************************************************9998...***************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (702 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       923  (0.0514808); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.24s 00:00:00.87 Elapsed: 00:00:00.42
# Mc/sec: 4998.57
//
Query:       EPX73193.1  [L=638]
Description: DNA replication pre-initiation complex subunit Cdc45 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   6.3e-226  751.6   1.2   7.3e-226  751.4   1.2    1.0  1  CDC45        CDC45-like protein
  ------ inclusion threshold ------
       0.03   13.8   0.4      0.067   12.6   0.1    1.7  2  DUF416       Protein of unknown function (DUF416)
       0.59   10.0   7.8      0.064   13.1   2.8    1.9  2  Sigma70_ner  Sigma-70, non-essential region


Domain annotation for each model (and alignments):
>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  751.4   1.2  1.2e-229  7.3e-226       1     636 []      26     635 ..      26     635 .. 0.90

  Alignments for each domain:
  == domain 1  score: 751.4 bits;  conditional E-value: 1.2e-229
       CDC45   1 VlilvaldvDalCAariLtsLLkkdliphkivPVsGyedlekaleelveegeelrsvvllnlGalvdleelleleegvevyViDshRPwnleNlfgsse 99 
                 V i+vald+DalCA+++L++LLk+d+i+hki PVsGy+dle+a+e++ e++e+l++++lln+G +vdl+ +l+ +e++ vyViDshRP+nl+Nl+    
  EPX73193.1  26 VHIFVALDPDALCACKLLSRLLKADFISHKIRPVSGYRDLENANETILEKNEDLKFLILLNCGNMVDLNGYLKSDEDISVYVIDSHRPYNLDNLY---- 120
                 89********************************************************************************************9.... PP

       CDC45 100 ekerivvfDDgdieeeleeereayealeeeeesdeedeeeeeeddddeeeeeeeeedeedeeedeeeskkkrksksdeeeesddddersrkrrrsepsa 198
                 +++ri +fDDgdiee++ + ++a++ale+ + sdee++     ++++e++ e++++d++de+e+++                ++  +rsr+r   e+++
  EPX73193.1 121 RENRIYIFDDGDIEEDMGKIHDAWFALESLPSSDEESD-----SSESENAPEDDSNDGQDEDESNNP---------------SELPKRSRRRYSAETEQ 199
                 5789****************************984432.....222222222222222222222222...............11222333333333333 PP

       CDC45 199 kk.lrrqlkkerrkyeavlekyysqgtsygesvsslmYsLaselgredndlLWlAIvGltslelserisaeryerlrallrdeVrrlnpss..ktekie 294
                 ++  r+   +++++y+ vl++yy++g+++ges++ ++YsL s+lgrednd+LWlAI+Gltsle++ r+s++ ++r ++ll+deV+rlnp +   t++ +
  EPX73193.1 200 RRvIRKDIIRKKKEYHYVLAEYYDTGSWFGESITNMLYSLGSMLGREDNDMLWLAIIGLTSLEVHCRSSKKYFDRSYNLLKDEVNRLNPVPleRTNVGR 298
                 3203455999*******************************************************************************8777777778 PP

       CDC45 295 tkarspddtsirlseelrllLlRhWsLydSmlhssYvaskLklWsekGrkrLhkLLAkmGvsLaqakqkYthmdlelkreLreklekiapeygLddlvy 393
                  + ++p d+sirl++e+r++L+RhWsLy++mlhs+Yv s+L++Wse+GrkrLhkLLAkmG+sL ++kq+Y hmd++lk++L++ l+++ap ygLdd+++
  EPX73193.1 299 PHGKTPYDQSIRLEDEFRFMLIRHWSLYNAMLHSAYVGSRLHIWSEEGRKRLHKLLAKMGLSLVECKQTYIHMDMNLKKTLKSSLQRFAPLYGLDDVIF 397
                 8889*********************************************************************************************** PP

       CDC45 394 esFvrsygyraelsAaDvvealtAlLevgkgveaksekeaeesekeseeeeeeeeeeeaeeeekeeeewvknFweAydaLdkknidlLkkglelaqslq 492
                 +sF+r+yg++++lsA+Dv++a++AlLevg   +        ++++ ++e +++ee+  ++ ee++++ew+knF++AydaLd  n+++L+k+l+la+ +q
  EPX73193.1 398 HSFTRTYGFKCTLSASDVAYAISALLEVGGAGT------FLQAKNVTKEPDMTEEQYLQKFEEEQKQEWLKNFYDAYDALD--NVNALEKALKLAMDMQ 488
                 ****************************99332......2223333335678899999999********************..**************** PP

       CDC45 493 raivrtgtsliekkqirtlrafrlavlkdgpdlelFthpaaLtkLalwllealresekekkkkkkkllPlVlasldeergtylVvGvtgkaasggdve. 590
                 r+ivrtg++l+ek++i+ lr+fr+ ++++gpd+ +F+hp aLtkL+lw+ ea+re+eke +  k k+lPlVla++ ee+++yl+vG++ +a +++d e 
  EPX73193.1 489 RSIVRTGIALLEKRAIKALRSFRIGLISEGPDIRIFQHPLALTKLSLWVSEAIREQEKELG--KLKHLPLVLAVMIEEKNSYLIVGTSTSAFTSNDDEd 585
                 ***********************************************************86..789***********************9877777668 PP

       CDC45 591 ....kNrFglaFqevaeetgarvridsFessvievrkeDlakFlekLslk 636
                     +NrFg+aFqeva++t+a++++d Fe+svie++k+Dl+ Fle+Lslk
  EPX73193.1 586 dghgHNRFGVAFQEVANMTSATLQMDCFEASVIECKKADLGLFLESLSLK 635
                 9999*******************************************986 PP

>> DUF416  Protein of unknown function (DUF416)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0      0.55   3.3e+03      86     101 ..     409     424 ..     387     428 .. 0.83
   2 ?   12.6   0.1   1.1e-05     0.067      60     105 ..     441     486 ..     430     509 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 0.55
                 HHHHHHHHHHHHHHHH CS
      DUF416  86 vypAlDacvalsallq 101
                 +++A D++ a+sall+
  EPX73193.1 409 TLSASDVAYAISALLE 424
                 6899********9986 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 1.1e-05
                 -GGGHHHHHHHHHHH---GGG--STTHHHHHHHHHHHHHHHHHHH- CS
      DUF416  60 akinfeaqlekleeiiPdledfdfygvypAlDacvalsallqalae 105
                  +++ e++l+k+ee+  ++   +fy++y AlD + al+++l++ ++
  EPX73193.1 441 PDMTEEQYLQKFEEEQKQEWLKNFYDAYDALDNVNALEKALKLAMD 486
                 56677899**********9**********************98743 PP

>> Sigma70_ner  Sigma-70, non-essential region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   2.8   1.1e-05     0.064      34      95 ..     150     212 ..     113     224 .. 0.73
   2 ?   -2.6   0.2      0.71   4.2e+03     153     176 ..     443     465 ..     435     485 .. 0.64

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.1e-05
  Sigma70_ner  34 eeeeeeeeeedeeeeeeeedddeeeseseaadeeelkeealekfeelreqyeklrk.alkkkg 95 
                   + ++ee++++e+e++ e+d++++++e+e+++ +el+++ ++++++  eq + +rk ++ kk+
   EPX73193.1 150 LPSSDEESDSSESENAPEDDSNDGQDEDESNNPSELPKRSRRRYSAETEQRRVIRKdIIRKKK 212
                  44445455555555555566668999********************99999999996444442 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.71
  Sigma70_ner 153 mprkdFiksFpgnetdlewlekll 176
                  m  ++++++F ++e ++ewl+++ 
   EPX73193.1 443 MTEEQYLQKF-EEEQKQEWLKNFY 465
                  5555666666.4455566666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (638 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1074  (0.059903); expected 358.6 (0.02)
Passed bias filter:                      696  (0.0388198); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.70u 0.34s 00:00:01.04 Elapsed: 00:00:00.47
# Mc/sec: 4050.41
//
Query:       EPX73194.1  [L=1379]
Description: ATP-dependent DNA helicase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-62  211.7   0.1    2.5e-62  210.6   0.1    1.5  1  SNF2_N        SNF2 family N-terminal domain
    3.1e-09   36.5  11.3    1.1e-08   34.7  11.3    2.1  1  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
    6.1e-09   36.1  11.2    2.4e-08   34.2  11.2    2.1  1  zf-RING_2     Ring finger domain
    1.6e-08   34.3   8.0      4e-08   33.0   8.0    1.8  1  Prok-RING_4   Prokaryotic RING finger family 4
    1.7e-08   34.2   9.1    1.7e-08   34.2   9.1    2.6  2  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
    6.8e-08   32.8   0.1    2.2e-07   31.2   0.1    2.0  1  Helicase_C    Helicase conserved C-terminal domain
    1.6e-07   31.1   9.9    6.4e-07   29.1   9.9    2.2  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
    0.00025   21.0  10.0    0.00025   21.0  10.0    2.2  2  zf-RING_5     zinc-RING finger domain
    0.00034   20.8   7.6     0.0014   18.9   7.6    2.1  1  zf-rbx1       RING-H2 zinc finger domain
    0.00049   20.1   7.8     0.0013   18.7   7.8    1.8  1  zf-RING_UBOX  RING-type zinc-finger
     0.0037   17.4   6.3      0.011   15.8   6.3    1.9  1  zf-RING_10    zinc RING finger of MSL2
  ------ inclusion threshold ------
      0.011   15.9   8.7      0.027   14.6   8.7    1.8  1  zf-C3HC4_4    zinc finger of C3HC4-type, RING
       0.26   11.2   6.8       0.85    9.6   5.9    2.4  2  Baculo_IE-1   Baculovirus immediate-early protein (IE-0)
        2.7    8.2   6.8        2.6    8.2   3.8    2.5  2  zf-UDP        Zinc-binding RING-finger
        2.7    7.7  14.4        1.5    8.5   6.9    3.1  3  zf-P11        P-11 zinc finger
        5.3    7.1   9.0       0.97    9.4   2.4    2.9  2  Gin           Inhibitor of sigma-G Gin


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  210.6   0.1   2.2e-65   2.5e-62       1     349 [.     228     589 ..     228     589 .. 0.88

  Alignments for each domain:
  == domain 1  score: 210.6 bits;  conditional E-value: 2.2e-65
                 HHHHHHHHH.............................................HH..HHHTT--EEE---TTS--HHHHHHHHH...HHTTTS---.. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxx..xxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.. RF
      SNF2_N   1 yQkeavkwmlkReqnlqdleaalrkllk....tldgekiyvnpatgevv..eesae..akqsvrGGiLaDemGLGKTvqvlalilaqrakeekdkek.. 89 
                 +Q+++++wm +Re  l  +  +l  l++     +d  ki+vn + g v   +e+++  a++sv+GG+LaDemG+GKT+++l+lil ++    ++ +   
  EPX73194.1 228 FQRRSIEWMIHRETDLPRNSCPLPPLWHeyqlPHDERKIFVNHTYGYVTlsKENVFqlAPASVKGGVLADEMGMGKTLEILSLILFHQ---RSKDNLfg 323
                 6***************************999999**********997752233333237899***********************444...33333355 PP

                 ..............S-EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH-----------------EEEE-HHHHHHHT................. CS
                 .......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.............. RF
      SNF2_N  90 .......krkdtlagptLivvPaslldqWeneierhvsssalrvlvyggqkkmkkkntkvapklladydvvittYdvlsreaelq.............. 167
                        k+   l+ +tLi+ P++++dqW +e+e hv+s +l  ++y+g +    k   +  +++ d+d+v+t+Y+ l++e  +               
  EPX73194.1 324 tqydpvlKKDVILSRATLIITPSTIIDQWISEVELHVPSLKL--FHYKGVR----KSGSIPVEQFLDADIVVTSYSDLRFELLYAesfsrnlrhekrhi 416
                 5788877777889999************************98..9999975....55778999*****************998889*********9977 PP

                 ...TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHHHHHHH-TTTT--..HHHHHHHTHHHHHHHHHHHHHHHHTT- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 168 kkrsvlkqvewkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledlygLlkfLreepfge..kqtfdkllqrpieaqaekgrsrLlqll 264
                   +s+l ++ w+r+++DE+++++ s+s++a+++ ++   n w ++GTP+ n++ dl+gLl + r +p  +  kqt+++ ++ +       ++++  ++ 
  EPX73194.1 417 PPKSPLIDICWWRICVDEAQMVETSQSNVAQMIYRIPRVNCWAVSGTPVRNDVDDLFGLLFLFRYSPIYQhrKQTWNQIIELN-------RVHEFCSIF 508
                 6789*****************************************************99988888775553666****97644.......679****** PP

                 STTEE---GGGT..--S---EEEEEEEEE--HHHHHHHH....................HHHHHH-HH.H-HHHHHHHHHHHHH---X CS
                 xxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxx RF
      SNF2_N 265 qrlmlrrakkdv..eknlPpkteeiiflklskverksYnrllevlrkkalakllkrseaalksssksk.ekilelllelrqacnhpql 349
                 ++l  r  k+d+  e +lP ++ + +  +l+ ve+  Y+    +l  +a+++l+  ++  l+ s+ ++ ++    l +lrq c+hpq+
  EPX73194.1 509 SPLTCRNCKEDIahELQLPTQHRMYMPTRLTVVEETNYQ----DLLSEAAKSLKYLDDHYLDLSQLDSmKR---WLIRLRQSCCHPQV 589
                 ************9999***********************....7777888888889999999998888555...478*********85 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.7  11.3   9.9e-12   1.1e-08       1      40 []    1094    1132 ..    1094    1132 .. 0.98

  Alignments for each domain:
  == domain 1  score: 34.7 bits;  conditional E-value: 9.9e-12
  zf-C3HC4_2    1 kCpiCldmlkdpsvvtpCgHvfCqkCilrsLeekneCPlC 40  
                  +C iC d++k++  +t CgH +C++C+  +++++ +CP+C
  EPX73194.1 1094 QCVICRDVIKKG-FITTCGHFYCRDCLVAWMKHHPSCPMC 1132
                  7**********9.9************************** PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2  11.2   2.1e-11   2.4e-08       2      44 .]    1094    1133 ..    1093    1133 .. 0.95

  Alignments for each domain:
  == domain 1  score: 34.2 bits;  conditional E-value: 2.1e-11
   zf-RING_2    2 eCpICleelssadsvlllpCgHvfhreClerwlrssstCPlCr 44  
                  +C+IC + ++++  ++   CgH+++r+Cl  w++++++CP+C+
  EPX73194.1 1094 QCVICRDVIKKGFITT---CGHFYCRDCLVAWMKHHPSCPMCK 1133
                  8********9999988...***********************7 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.0   8.0   3.6e-11     4e-08       1      46 []    1095    1142 ..    1095    1142 .. 0.93

  Alignments for each domain:
  == domain 1  score: 33.0 bits;  conditional E-value: 3.6e-11
  Prok-RING_4    1 CvlCgeqekkailepCgHlvCkeCfdsk.dls.sCPlCqrrisksdpf 46  
                   Cv+C+ + kk  +  CgH  C++C+ ++ ++  sCP+C+ ++ k+++f
   EPX73194.1 1095 CVICRDVIKKGFITTCGHFYCRDCLVAWmKHHpSCPMCKAKLTKNSAF 1142
                   ****************************74447*********999988 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.1      0.56   6.3e+02       4      23 ..     512     531 ..     509     533 .. 0.74
   2 !   34.2   9.1   1.5e-11   1.7e-08       2      48 ..    1092    1137 ..    1091    1139 .. 0.95

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.56
                 B-TTTSSSBS-EEETTEEEE CS
  zf-C3HC4_3   4 eCviClerprnvvllpCgHl 23 
                 +C  C+e  +  + lp++H 
  EPX73194.1 512 TCRNCKEDIAHELQLPTQHR 531
                 68888888888888888776 PP

  == domain 2  score: 34.2 bits;  conditional E-value: 1.5e-11
                  GSB-TTTSSSBS-EEETTEEEEEE-HHHHHHHHHTT-B-TTT--B-- CS
  zf-C3HC4_3    2 deeCviClerprnvvllpCgHlvlCeeCaekllkrkkkCpiCrrpie 48  
                  +++CviC +  ++ ++  CgH+ +C +C+  ++k++++Cp+C+++ +
  EPX73194.1 1092 KQQCVICRDVIKKGFITTCGHF-YCRDCLVAWMKHHPSCPMCKAKLT 1137
                  689*******************.********************9876 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2   0.1   1.9e-10   2.2e-07       5     111 .]    1193    1300 ..    1189    1300 .. 0.84

  Alignments for each domain:
  == domain 1  score: 31.2 bits;  conditional E-value: 1.9e-10
                  HHHHHH...HHTTTTSEEEEEESSHHHHHH.HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH.TTSSSEE.EESGGGTSSSTSTTESEEEESSSSS CS
  Helicase_C    5 allell...kleeeggkilifvntidrlek.vklllekkgikvavlhgelpqnereeileqfn.kgesdvL.iatdvaerGidipkvnlVinfdlpr 95  
                  a+++ l   k+ e   k+++f++  d le   k + e +++++++++g    + ++  l++f+ + ++ vL + ++  + G++++++++Vi++++  
  EPX73194.1 1193 AIVRHLiylKQIELYPKVVVFSQWLDVLEVlHKSF-EANNVSFLRFDG----KAKNNCLKNFKaDRDIEVLtLHSRSQSAGLTLTNATHVIMCEPLL 1284
                  555554456899999***********996544555.5668********....888899****94456668889************************ PP

                  SHHHHHHHHTTSSSTT CS
  Helicase_C   96 nvtsyiqriGRtgRag 111 
                  n     q+i R++R+g
  EPX73194.1 1285 NSGIELQAISRVHRIG 1300
                  **************97 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1   9.9   5.7e-10   6.4e-07       1      41 []    1095    1132 ..    1095    1132 .. 0.98

  Alignments for each domain:
  == domain 1  score: 29.1 bits;  conditional E-value: 5.7e-10
                  -TTT-S--SS-E.E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4    1 CpiCleeakepnelleCkHsfCskCirkilksrkkvkCPlC 41  
                  C iC +++k+   +++C+H +C++C++ ++k   + +CP+C
  EPX73194.1 1095 CVICRDVIKKGF-ITTCGHFYCRDCLVAWMK--HHPSCPMC 1132
                  9***********.******************..8899**** PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0  10.0   2.2e-07   0.00025       2      43 ..    1095    1133 ..    1094    1134 .. 0.95
   2 ?   -2.8   0.0       5.9   6.6e+03       3      10 ..    1243    1255 ..    1243    1281 .. 0.59

  Alignments for each domain:
  == domain 1  score: 21.0 bits;  conditional E-value: 2.2e-07
   zf-RING_5    2 CnkCfeklskeekfyltsCgHifCekClkkllekeavCpiCr 43  
                  C +C++ +   +k ++t+CgH++C +Cl   ++    Cp+C+
  EPX73194.1 1095 CVICRDVI---KKGFITTCGHFYCRDCLVAWMKHHPSCPMCK 1133
                  99****99...9*****************************8 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 5.9
   zf-RING_5    3 nkCfekl.....s 10  
                  n+C +++      
  EPX73194.1 1243 NNCLKNFkadrdI 1255
                  7899998544330 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   7.6   1.2e-06    0.0014       8      55 .]    1089    1133 ..    1085    1133 .. 0.83

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 1.2e-06
     zf-rbx1    8 neleeacieckapgdeecpvvlGeCgHaFHlhCiskWlktrkvCPlcr 55  
                   + +++c+ c+   ++     + +CgH +  +C+  W+k++ +CP+c+
  EPX73194.1 1089 ASSKQQCVICRDVIKK---GFITTCGHFYCRDCLVAWMKHHPSCPMCK 1133
                  5667788888888887...44457***********************6 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   7.8   1.2e-06    0.0013       1      39 []    1095    1130 ..    1095    1130 .. 0.87

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 1.2e-06
  zf-RING_UBOX    1 CpIClelftdPlv.lpCGHtFCreClwelskslegafkCP 39  
                    C IC+++ ++  + ++CGH +Cr+Cl     + + + +CP
    EPX73194.1 1095 CVICRDVIKKG-FiTTCGHFYCRDCL---VAWMKHHPSCP 1130
                    99******977.3257**********...88999999998 PP

>> zf-RING_10  zinc RING finger of MSL2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   6.3     1e-05     0.011       3      45 ..    1095    1134 ..    1093    1144 .. 0.88

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1e-05
  zf-RING_10    3 CvvCckLLvdPlepkekeCqHyvCrlCvgkkkklkpsCsqCkd 45  
                  Cv+C  ++++ +     +C+H+ Cr C+   +k +psC++Ck 
  EPX73194.1 1095 CVICRDVIKKGFIT---TCGHFYCRDCLVAWMKHHPSCPMCKA 1134
                  99999999998876...8***********************94 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   8.7   2.4e-05     0.027       1      42 []    1095    1132 ..    1095    1132 .. 0.93

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 2.4e-05
  zf-C3HC4_4    1 CPiCldYLekPvsleCGhsfClsCisslqkepdgeqllCplC 42  
                  C iC+d ++k     CGh +C  C+ +++k+      +Cp+C
  EPX73194.1 1095 CVICRDVIKKGFITTCGHFYCRDCLVAWMKHH----PSCPMC 1132
                  99************************999887....469999 PP

>> Baculo_IE-1  Baculovirus immediate-early protein (IE-0)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       4.1   4.6e+03      42      69 ..    1018    1045 ..    1008    1049 .. 0.78
   2 ?    9.6   5.9   0.00076      0.85      47     134 ..    1053    1139 ..    1033    1143 .. 0.69

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 4.1
  Baculo_IE-1   42 kklkaaldelleeseksleviklinerv 69  
                   + ++++l+e  +es+++le +  +  ++
   EPX73194.1 1018 EACAKTLEEETQESKSELESVDEMVLKI 1045
                   5678899999999999999998887665 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00076
  Baculo_IE-1   47 aldelleeseksleviklinervqvl.n.....vflekklyqcnicedtsaeerflkPneccGykicnlcyanlwkfstvyPvcPvcktsfkss 134 
                    l+el +e ++ l+ i  +++r + l n     v+  +   qc ic+d  + + f+   + cG+  c  c +    + + +P cP+ck+   ++
   EPX73194.1 1053 LLNELNKEKQNGLRKIGHFESRHRYLcNlyehvVLRASSKQQCVICRDVIK-KGFI---TTCGHFYCRDCLVA---WMKHHPSCPMCKAKLTKN 1139
                   56666777777777777776666554131111122333456999**99865.5687...58***9***99775...55679*******987655 PP

>> zf-UDP  Zinc-binding RING-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       2.5   2.8e+03      10      31 ..     425     448 ..     419     457 .. 0.78
   2 ?    8.2   3.8    0.0023       2.6       4      62 ..    1088    1138 ..    1086    1145 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 2.5
      zf-UDP  10 iC..qiCgddvgltedgelFvacn 31 
                 iC  +iC d+ ++ e+ +  va +
  EPX73194.1 425 ICwwRICVDEAQMVETSQSNVAQM 448
                 56558*******999998888765 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.0023
      zf-UDP    4 kdlngqiCqiCgddvgltedgelFvacnecafpvcrpcyeyerkdgnqsCPqCktrykr 62  
                  + +++q C iC d ++       F  ++ c+   cr c+    k    sCP Ck++ ++
  EPX73194.1 1088 RASSKQQCVICRDVIKKG-----F--ITTCGHFYCRDCLVAWMKHH-PSCPMCKAKLTK 1138
                  6678999******99754.....5..578**********9998887.89******9877 PP

>> zf-P11  P-11 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       3.6   4.1e+03      13      26 ..     555     568 ..     553     575 .. 0.74
   2 ?    1.8   2.3      0.18     2e+02      20      42 ..    1075    1099 ..    1069    1102 .. 0.82
   3 ?    8.5   6.9    0.0013       1.5      11      45 ..    1102    1136 ..    1093    1139 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 3.6
                 SSEEE-SSSEEEHH CS
      zf-P11  13 ksLveCsdHYLClr 26 
                 ksL   +dHYL l 
  EPX73194.1 555 KSLKYLDDHYLDLS 568
                 6777789***9775 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.18
                  SSEEEHHHHHHHHHHS..SBETTTS CS
      zf-P11   20 dHYLClrClqllLsvs..erCpiCk 42  
                    YLC    +++L+ s  ++C iC+
  EPX73194.1 1075 HRYLCNLYEHVVLRASskQQCVICR 1099
                  57***********9983347****7 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.0013
                  --SSEEE-SSSEEEHHHHHHHHHHSSBETTTSSB- CS
      zf-P11   11 kdksLveCsdHYLClrClqllLsvserCpiCkkPL 45  
                   +k+ ++   H+ C+ Cl   ++    Cp+Ck  L
  EPX73194.1 1102 IKKGFITTCGHFYCRDCLVAWMKHHPSCPMCKAKL 1136
                  4689999999**********************876 PP

>> Gin  Inhibitor of sigma-G Gin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.5         1   1.1e+03      14      29 ..     507     522 ..     505     524 .. 0.82
   2 ?    9.4   2.4   0.00087      0.97       1      24 [.    1095    1119 ..    1095    1128 .. 0.89

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 1
                 SSS--EEHHHHHHHHH CS
         Gin  14 ilgkfICeeCekkivn 29 
                 i++ + C++C ++i +
  EPX73194.1 507 IFSPLTCRNCKEDIAH 522
                 566677******9975 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00087
                  -TTT--EESSE.E-SSS--EEHHHH CS
         Gin    1 CiiCekekeeG.iiilgkfICeeCe 24  
                  C+iC++  ++G i+ +g+f C++C 
  EPX73194.1 1095 CVICRDVIKKGfITTCGHFYCRDCL 1119
                  *********865899*********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1379 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       860  (0.047967); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.87u 0.29s 00:00:01.15 Elapsed: 00:00:00.49
# Mc/sec: 8416.97
//
Query:       EPX73195.1  [L=836]
Description: AP-3 adaptor complex subunit Apl5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.1e-94  316.0  17.6    4.9e-94  315.8  17.6    1.1  1  Adaptin_N  Adaptin N terminal region
    2.3e-11   44.0   9.7    4.5e-09   36.6   0.2    2.6  2  Cnd1       non-SMC mitotic condensation complex subunit 1
    0.00057   19.9   5.0        4.6    7.8   0.4    4.7  4  HEAT       HEAT repeat
  ------ inclusion threshold ------
       0.06   13.7   0.3          1    9.8   0.0    3.0  3  HEAT_2     HEAT repeats
        7.7    6.7  19.2        1.7    8.9   0.5    3.5  3  AP3D1      AP-3 complex subunit delta-1


Domain annotation for each model (and alignments):
>> Adaptin_N  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  315.8  17.6   1.4e-97   4.9e-94       1     521 [.      21     575 ..      21     578 .. 0.93

  Alignments for each domain:
  == domain 1  score: 315.8 bits;  conditional E-value: 1.4e-97
                 XHHHCCHHHHHHCCSSS.-SCHHHHHHHHHHHHHHHCT---GHHHHHHHCCCCSS-CHHHHHHHHHHHHHCTTSCCHHCCCCHHHHHHCCSSSHHHHHH CS
   Adaptin_N   1 eekriqqelaeilnsnk.dddekkkeavkkliylialGedvsflffevvklvaskdfelKrlvYlylellaeesedlalLvtnslqkDlkdpnqlirgl 98 
                 ee++i+ +l e++++ + +d e k+ea  kl+yl + G d+s++ f++++++as+++++K+ +Yl+++++++  +d+++L+tn ++kD  ++      +
  EPX73195.1  21 EESYINGCLLECRKEVSsQDAEIKAEAALKLAYLEMFGFDISWASFQIIEVMASSQLSQKQRGYLAAVQSFKPTTDVLMLTTNLIKKDIMSSKVPEITI 119
                 5788999999999999989999***************************************************************************** PP

                 HHHHHCCC--CCCHHHHHHHHHHHHT-SSHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHCTT-SSHHHHHHHHHHHHHH.HCCCCCCCHHHHHHHCC CS
   Adaptin_N  99 ALrvLssirvpelaedlapaikkllkdrspyvrkkAalailklykkdpdllrkqlveeikellsdkdpgvvlaAvalleei.kkndrlllkllpklvrr 196
                 A+++Ls i++  la+dl++++  ll+++ py+rk  ++ +++l  ++pd+++   v+++ e l+d+d++vv a v++++e+ +++++++l+ +p+l++ 
  EPX73195.1 120 AINGLSHISTYGLARDLYQDVLILLNHSVPYIRKRTIMVLYRLCLQYPDAIPIC-VPKLRERLDDTDTSVVNASVSVICELaRRTPKNYLEFAPDLFHL 217
                 ***************************************************996.******************************************** PP

                 HHHHHHCS-HHHHHHHHHHHCC---SSHHHH..HHHHHHHCGGCG.CSSCHHHHHHHHHCC......HCCCCSTHHHCCHHCHHHHHHSSCCTCHHHHH CS
   Adaptin_N 197 Lcnllteldpwlqvkiiklltrlarqepeerskkellesllnllq.ssnnaVlletvnliv......elapknelivlavnaLvrllsskdenlryvaL 288
                 L+   +++++w+ +k++kl+ +l++ ep++   k+l++ l++ ++ + ++++l+e++n+iv      +++ +++l+ l++++L ++  + d+nl+yvaL
  EPX73195.1 218 LT---NSSNNWMLIKLVKLFASLTPYEPRLV--KKLVPALTQIIEtTHAMSLLYECINTIVsgnmlvNYSRSDQLACLCATKLREFFLDTDQNLKYVAL 311
                 **...**************************..67**********9999************9999998899999************************* PP

                 CHHHHHHHHXXTTTT.TTTCCCCSXXTTSXHHHHHHHHHHHCCCXXTTTHHHHHHHHHHHTTSSXXHH....HHHHHHHHHHHHHHHS....CCHHHHH CS
   Adaptin_N 289 rtllkivkkepkavq.hldlkifllktdddvsirlkaldlllklvdesNvkeivkeLkkyvkevaded....fksklvkaIgrlaekf....atdaewv 378
                  ++ k++ ++++ v  +ld+++++l+ d d+s r++aldl+ ++v+++N+  ivk+++ ++  ++d       +  ++ +++++++k+    ++d+ew 
  EPX73195.1 312 LSFTKLSITHEELVAqQLDIILQCLI-DSDISLRMRALDLVCQIVNSENIVSIVKTIMLQLVASSDDIyveeSRNITALKLIEMTSKStyavVSDFEWL 409
                 **********999999**********.*********************************95555544566699999********************** PP

                 HHHHHHHHTTXXHHHHHHHHHHHHHHHHHSTTTSTTCHHHHCCTCCG...........XXSHHHHHHHHHHHHHTTTTXTT............HHHHHH CS
   Adaptin_N 379 ldvllellslsgesvkdeivevirdliqkvpelheeiiekLaellek...........ieseearaaaiWllGeygelvsn........te.sasdllr 457
                 l+v ++l ++ + +v++   ++i dl ++v++l+ +++    + +++            ++ e++ +++W+lGey+e v++         +   ++l +
  EPX73195.1 410 LSVYVDLARIPQIHVGKILSSQIVDLCVRVKALRPFAVDLFSQIISDpstifserkseESFSEVLPSLLWCLGEYAEYVEDyidildvlVRpASTSLPS 508
                 *********************************************9999998776544445559*************************888******* PP

                 CTTTTTTTSXHHHHHHHHHHHHHHHHCXGCC.THX......HHHHHHHHHHHXXSHHHHHHHHHHHHHHC CS
   Adaptin_N 458 slaekfvlesekvklqiltalvKlyltspdketqe......kliqlvlslatssdlevrdRaveylqlls 521
                 s++ +++++  k+++q++ +    +  ++            +++q++ ++ + +d+e + Ravey+ ++ 
  EPX73195.1 509 SIQAVLIQCVPKLFCQWCINEEAAWGAEKLG---LvklwvtRIQQFMDNYVQFLDMEAQLRAVEYSIMFA 575
                 ****************998766555333221...12244559**********99***********99886 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.6   0.2   1.3e-12   4.5e-09       6     147 ..     120     254 ..     118     274 .. 0.84
   2 !    9.5   4.6   0.00026      0.93      22     122 ..     291     391 ..     276     402 .. 0.81

  Alignments for each domain:
  == domain 1  score: 36.6 bits;  conditional E-value: 1.3e-12
        Cnd1   6 airtlgcirvpnlveylvepLrkrLkDedpyVRktaaivvakLilndmvkekgflselaklleDenprVvanalaalteiseksenaiynllpdiiskl 104
                 ai  l+ i    l   l +++   L+ + py+Rk +++v+ +L l+        + +l++ l+D++++Vv+ ++++++e++++++++ ++  pd+++ l
  EPX73195.1 120 AINGLSHISTYGLARDLYQDVLILLNHSVPYIRKRTIMVLYRLCLQYPDAIPICVPKLRERLDDTDTSVVNASVSVICELARRTPKNYLEFAPDLFHLL 218
                 55666666666777777788888899999**************777766667799*******************************************9 PP

        Cnd1 105 sdalnecsewgqitilefLlsyipkdkqeaeslveklcprlqh 147
                     n+ ++w  i+ +++ +s +p + +    lv+kl+p l++
  EPX73195.1 219 T---NSSNNWMLIKLVKLFASLTPYEPR----LVKKLVPALTQ 254
                 9...579*******************99....66666666554 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00026
        Cnd1  22 lvepLrkrLkDedpyVRktaaivvakL.ilndmvkekgflselaklleDenprVvanalaalteiseksenaiynllpdiisklsdalne..csewgqi 117
                   ++Lr+ + D+d+  +  a++ ++kL i+++     ++l+ ++++l D++ + +  al + ++i + +  +i++++++i+ +l+++ ++  ++e   i
  EPX73195.1 291 CATKLREFFLDTDQNLKYVALLSFTKLsITHEELV-AQQLDIILQCLIDSDISLRMRALDLVCQIVNSE--NIVSIVKTIMLQLVASSDDiyVEESRNI 386
                 5678999999*****************98777665.566***************************998..6889999999999976666555555555 PP

        Cnd1 118 tilef 122
                 t l++
  EPX73195.1 387 TALKL 391
                 55554 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.1   0.0    0.0094        34       5      28 ..     140     163 ..     136     166 .. 0.89
   2 !    5.5   0.1    0.0068        24       2      29 ..     174     201 ..     173     202 .. 0.93
   3 !    7.8   0.4    0.0013       4.6       2      28 ..     329     355 ..     329     357 .. 0.93
   4 ?   -1.9   0.0       1.7     6e+03      21      30 ..     478     487 ..     476     488 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0094
                 HHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAakaLgala 28 
                 +l ll+++ p +R+ ++  L +l+
  EPX73195.1 140 VLILLNHSVPYIRKRTIMVLYRLC 163
                 56789*****************99 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.0068
                 HHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgalae 29 
                 +P l + l D++ +V  a++  +++la+
  EPX73195.1 174 VPKLRERLDDTDTSVVNASVSVICELAR 201
                 68999********************985 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.0013
                 HHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgala 28 
                 l+++l++l D++ + R+ A+  +++++
  EPX73195.1 329 LDIILQCLIDSDISLRMRALDLVCQIV 355
                 6789********************997 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 1.7
                 HHHHHHHHHC CS
        HEAT  21 akaLgalaev 30 
                 +++Lg+ ae+
  EPX73195.1 478 LWCLGEYAEY 487
                 79****9997 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.0         5   1.8e+04      12      24 ..      39      51 ..      35      54 .. 0.49
   2 ?    9.8   0.0   0.00028         1       8      55 ..     143     196 ..     138     224 .. 0.73
   3 ?   -0.3   0.0       0.4   1.4e+03      33      55 ..     329     351 ..     293     382 .. 0.59

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 5
      HEAT_2 12 pdpevrraairaL 24
                 d e++++a+  L
  EPX73195.1 39 QDAEIKAEAALKL 51
                4444444444444 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00028
      HEAT_2   8 lendpdpevrraairaLgri..gnpea....lpaLvellededpavRraaaeaL 55 
                 l n++ p++r+++i++L r+  + p+a    +p L+e l+d+d+ v  a +  +
  EPX73195.1 143 LLNHSVPYIRKRTIMVLYRLclQYPDAipicVPKLRERLDDTDTSVVNASVSVI 196
                 448888888888888888652244566666688888888888888887776655 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.4
      HEAT_2  33 lpaLvellededpavRraaaeaL 55 
                 l++++++l d+d   R+ a +  
  EPX73195.1 329 LDIILQCLIDSDISLRMRALDLV 351
                 66666666666666666665543 PP

>> AP3D1  AP-3 complex subunit delta-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.5    0.0083        30      17      47 ..     685     713 ..     672     737 .. 0.65
   2 ?    8.9   0.5   0.00048       1.7     123     143 ..     745     765 ..     718     780 .. 0.72
   3 ?   -1.2   8.7       0.6   2.2e+03      76     103 ..     807     834 ..     788     836 .] 0.61

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0083
       AP3D1  17 enNPhYLkssatssskksassaqnseeveei 47 
                   NP+YL ss+++++ ++ ++  n+  v+e+
  EPX73195.1 685 LDNPFYLNSSPSKEKDSAIENGAND--VDEV 713
                 57*********88743333333333..3333 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00048
       AP3D1 123 avnrttlemPegaelsDsedk 143
                  v++++ e+Peg++lsD+++ 
  EPX73195.1 745 PVEIAQDEIPEGVRLSDEDQL 765
                 288899***********9985 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 0.6
       AP3D1  76 rkakkkakeekkkkkkkkkkkkkkkkkk 103
                 ++++kk+k+++ + k +k++kkk  kk+
  EPX73195.1 807 KRKEKKKKTQGTETKGEKERKKKTPKKS 834
                 3344444445555555555555555543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (836 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1109  (0.0618551); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.69u 0.32s 00:00:01.01 Elapsed: 00:00:00.46
# Mc/sec: 5472.00
//
Query:       EPX73196.1  [L=320]
Description: ATP binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.3e-81  273.9   0.0    1.7e-81  273.6   0.0    1.1  1  ATP_bind_1    Conserved hypothetical ATP binding protein
    1.4e-05   25.0   0.0    0.00025   20.9   0.0    2.2  1  CLP1_P        mRNA cleavage and polyadenylation factor CLP1 P
     0.0036   17.2   0.0        1.7    8.5   0.0    2.5  2  AAA_31        AAA domain
  ------ inclusion threshold ------
      0.022   14.1   0.0       0.15   11.4   0.0    1.8  2  MipZ          ATPase MipZ
       0.03   14.0   0.0      0.099   12.3   0.0    1.8  1  AAA_30        AAA domain
      0.032   14.3   0.0      0.063   13.3   0.0    1.4  1  CbiA          CobQ/CobB/MinD/ParA nucleotide binding domain
      0.034   14.3   0.0      0.055   13.6   0.0    1.5  1  AAA_33        AAA domain
      0.041   12.9   0.0      0.079   11.9   0.0    1.3  1  MeaB          Methylmalonyl Co-A mutase-associated GTPase Mea
      0.063   13.4   0.0        6.4    6.9   0.0    2.4  2  MMR_HSR1      50S ribosome-binding GTPase
      0.067   13.6   0.0       0.12   12.8   0.0    1.5  1  RNA_helicase  RNA helicase
      0.092   13.2   0.5       0.63   10.5   0.1    2.3  2  AAA_17        AAA domain
       0.11   13.0   1.6       0.92   10.1   0.3    2.6  2  AAA_18        AAA domain
       0.12   11.8   0.0        0.2   11.1   0.0    1.3  1  KTI12         Chromatin associated protein KTI12
       0.16   12.2   0.0        1.2    9.4   0.0    2.1  2  AAA_22        AAA domain


Domain annotation for each model (and alignments):
>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  273.6   0.0   1.3e-84   1.7e-81       1     239 [.       7     253 ..       7     255 .. 0.98

  Alignments for each domain:
  == domain 1  score: 273.6 bits;  conditional E-value: 1.3e-84
  ATP_bind_1   1 vvGpaGsGKttfvgalseilelrgrsvavvNLDPAaeelpYeaavdirelitledvmedlglgpngalvvaleflresldwldeelekeeddyllfDtP 99 
                 vvGp+GsGK+t++  + ++l+++gr++ +vNLDPA++ ++Y++a+dir++i+ e +++d++lgpngal++a+e+++ ++dwl eele ++d y+++D+P
  EPX73196.1   7 VVGPPGSGKSTYCFGMHQFLSAIGRQCIIVNLDPANDFMSYPCAIDIRKVIDIETIQNDYDLGPNGALIFAMETIEYHVDWLCEELEAHKDTYVIIDCP 105
                 89************************************************************************************999********** PP

  ATP_bind_1 100 GQielfthseslakiveeLes..efalvvvyLvDsqrltdptkfisgllsalsamlrlelPhvvvlnkfDllkek..lekeleffedvealslllekee 194
                 GQ+elft ++sl+ki+ +L++  +f++vvv LvDs ++tdp+ +is+ll++l+ ml+l+lPh++vl+k+Dll+++  l ++l+f+++ve+ls+l+   +
  EPX73196.1 106 GQVELFTDHDSLQKIISTLSKriDFRPVVVQLVDSFCCTDPAAYISALLVCLKGMLQLDLPHINVLSKADLLSSYaaLPMNLDFYTNVEDLSYLTPILD 204
                 *********************9***************************************************99999****************99888 PP

  ATP_bind_1 195 .....ekykklaeaiaelleefalvlrflplssekeesiedllslideal 239
                       +y++l+++i+el+eef+lv +f +l++e++ s+  ll++id+a 
  EPX73196.1 205 rdprlIRYSQLNKTICELIEEFGLV-SFEVLAVENKVSMLHLLQKIDQAG 253
                 89999899*****************.*********************986 PP

>> CLP1_P  mRNA cleavage and polyadenylation factor CLP1 P-loop
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0     2e-07   0.00025       1     129 [.       9     124 ..       9     134 .. 0.81

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 2e-07
      CLP1_P   1 GpkdsGKSTlarlLlNyalrkgrkpvyvDlDvGqseispPgtislalverpidveegfsldaplvyffGdtspsdnpslylalvkelareveekleenk 99 
                 Gp  sGKST++  + + +   gr++++v+lD+    +s+P++i + +v   id  e +++d  l        p++++   ++ ++  ++ + e+le+  
  EPX73196.1   9 GPPGSGKSTYCFGMHQFLSAIGRQCIIVNLDPANDFMSYPCAIDIRKV---IDI-ETIQNDYDL-------GPNGALIFAMETIEYHVDWLCEELEA-- 94 
                 8999*************************************9987766...555.555556544.......67777777777777777666655555.. PP

      CLP1_P 100 kakasgliIntpGwvkgl.gaelllelieal 129
                  +k++ +iI++pG v+ +  ++ l+++i++l
  EPX73196.1  95 -HKDTYVIIDCPGQVELFtDHDSLQKIISTL 124
                 .5899**********9984589999999886 PP

>> AAA_31  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   0.0    0.0013       1.7      12      42 ..      12      42 ..      10      64 .. 0.89
   2 !    6.0   0.0    0.0078        10     107     134 ..      88     113 ..      59     118 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0013
      AAA_31 12 GvGKTTtsvnlaaalaklgkkvLlvDlDpQa 42
                G GK+T ++ + ++l+  g + ++v+lDp +
  EPX73196.1 12 GSGKSTYCFGMHQFLSAIGRQCIIVNLDPAN 42
                99**************************965 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.0078
      AAA_31 107 lkellekvkdeYDyiiiDcpPsLgllte 134
                 l e le+ kd+  y+iiDcp +++l+t+
  EPX73196.1  88 LCEELEAHKDT--YVIIDCPGQVELFTD 113
                 44445555554..6*********99986 PP

>> MipZ  ATPase MipZ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00011      0.15      11     112 ..      12     109 ..       5     116 .. 0.83
   2 ?    0.2   0.0       0.3   3.8e+02     192     208 ..     115     131 ..     108     141 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00011
                 TSSHHHHHHHHHHHHHTTT--EEEEE--TTT-HHHHHHHHHHHHHHHHT------EE.E-SSS-HHHHTTS-HHHHHHHHHHHHHHHHHH-S.EEEEE- CS
        MipZ  11 GsGksttavhvavaLlkkGarvaaidldlrqrtlarylenraataerkglsLplpea.lalseaeeaeveeeeeaevaeleelvadleaeld.fividt 107
                 GsGkst +  +   L++ G +   ++ld      + ++    a+  rk +++++ +  + l   + a +   e +e  +++ l+++lea+ d +++id+
  EPX73196.1  12 GSGKSTYCFGMHQFLSAIGRQCIIVNLDPA----NDFMSYPCAIDIRKVIDIETIQNdYDLGP-NGALIFAMETIE-YHVDWLCEELEAHKDtYVIIDC 104
                 9***************************75....56888899999999999998776144544.667788888888.789********99996799*** PP

                 -SS-- CS
        MipZ 108 PGsds 112
                 PG+ +
  EPX73196.1 105 PGQVE 109
                 **865 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.3
                 HHHHHHHHHHHHHHT-E CS
        MipZ 192 kkveealeeLskrvGfr 208
                  ++++ ++ Lskr+ fr
  EPX73196.1 115 DSLQKIISTLSKRIDFR 131
                 5678889999****999 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   7.8e-05     0.099      21      53 ..       5      37 ..       3     128 .. 0.62

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 7.8e-05
      AAA_30 21 avltGpAGtGKttalkalreaweaaggrviglA 53
                +v++Gp+G+GK+t   ++ + + a g++ i++ 
  EPX73196.1  5 QVVVGPPGSGKSTYCFGMHQFLSAIGRQCIIVN 37
                699********************9998877664 PP

>> CbiA  CobQ/CobB/MinD/ParA nucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   4.9e-05     0.063       9      85 ..      12     139 ..       6     143 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 4.9e-05
                 TSSHHHHHHHHHHHHHHTT--EEEEEEEESSCCCCH...........HTTEB-HHHH.......................................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...........xxxxxxxxxx.......................................... RF
        CbiA   9 GvGKTtlaanLaralarrglrVllvDaDpqannlai...........leglendiep.......................................... 54 
                 G+GK+t + ++++ l+  g++ + v +Dp     ++           +e       +                                          
  EPX73196.1  12 GSGKSTYCFGMHQFLSAIGRQCIIVNLDPANDFMSYpcaidirkvidIE-------Tiqndydlgpngalifametieyhvdwlceeleahkdtyviid 103
                 9*****************************4444447665444433333.......1555666699999999999999999999999999999999999 PP

                 .........CCHCCCHHHHHHCHCHHHH..EEEEEEEEES CS
                 .........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        CbiA  55 .........dlkrllellealgkkkalllkiagvvlnrvd 85 
                          d ++l +++++l+k+    +++  vv+  vd
  EPX73196.1 104 cpgqvelftDHDSLQKIISTLSKR----IDFRPVVVQLVD 139
                 999999999888888999999988....777777777666 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   4.3e-05     0.055       3      32 ..       6      40 ..       5     143 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 4.3e-05
      AAA_33  3 llvGlpGsGKstlaerllkklg.....avllssdt 32
                ++vG+pGsGKst+  ++++ l      +++++ d 
  EPX73196.1  6 VVVGPPGSGKSTYCFGMHQFLSaigrqCIIVNLDP 40
                689**********9999887776667777777666 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   6.2e-05     0.079      34      71 ..       7      44 ..       5      49 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 6.2e-05
                EEE-TTSSHHHHHHHHHHHHHCTT--EEEEEE------ CS
        MeaB 34 ltGvPGaGkstlvealglelrrrGkrvavlavDPsspf 71
                + G PG+Gkst    + + l + G++  ++ +DP+  f
  EPX73196.1  7 VVGPPGSGKSTYCFGMHQFLSAIGRQCIIVNLDPANDF 44
                5799******************************9876 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.041        53       3      14 ..       6      17 ..       5      29 .. 0.92
   2 ?    6.9   0.0     0.005       6.4      41      86 ..      92     141 ..      76     173 .. 0.64

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.041
                EEEESTTSSHHH CS
    MMR_HSR1  3 aivGrpNvGKSt 14
                ++vG p +GKSt
  EPX73196.1  6 VVVGPPGSGKST 17
                69*********9 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.005
                 EEETTEEEEEEECGGCSS..HHHHHH.HHHHHHHHHHC.TSEEEEEEETT CS
    MMR_HSR1  41 vklkgkeielvDtpGlie..gaseek.glgkaflalee.adlillvvdas 86 
                 ++ +++ ++++D+pG +e  +++++  ++  ++ + ++   +++ +vd+ 
  EPX73196.1  92 LEAHKDTYVIIDCPGQVElfTDHDSLqKIISTLSKRIDfRPVVVQLVDSF 141
                 44556799*******77666555555456666666666347888888854 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   9.3e-05      0.12       2      52 ..       6      53 ..       5      99 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 9.3e-05
  RNA_helicase  2 wlyGpsgeGKStlakeLakallkklklkkkdsvys.rnpeddfwdgYtgqev 52
                  +++Gp+g GKSt++   ++++l+++    ++ +++   p++df++     ++
    EPX73196.1  6 VVVGPPGSGKSTYCFG-MHQFLSAI---GRQCIIVnLDPANDFMSYPCAIDI 53
                  689*************.66777666...334444447777777765445555 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.1   0.00049      0.63       1      12 [.       8      19 ..       8      27 .. 0.90
   2 ?    0.1   0.0       0.8     1e+03      20      68 ..     254     309 ..     244     316 .. 0.52

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00049
                EE-TTSSHHHHH CS
      AAA_17  1 lGgPGsGKgtqc 12
                +G+PGsGK+t+c
  EPX73196.1  8 VGPPGSGKSTYC 19
                7**********9 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.8
                 TEEEEEH...HHHHHHHHHTTTSHSSHHHHC....TSHHHHHHHHHHHHHHHHHHH CS
      AAA_17  20 gfthlsa...Gdllreeakrgglakardemr....klpleekkelqkeaaekiaee 68 
                 g+++ s+   Gd++ ++a r+g ++ +d           ee +++ +e++ek  ee
  EPX73196.1 254 GYSYGSTeigGDIVWANAVRQGGDPLQDVSPqerwIDRREEYDRYEREMEEKYLEE 309
                 55555555558888888888886444433222222234444444555555555554 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.3   0.00072      0.92       3      16 ..       7      20 ..       6     108 .. 0.89
   2 ?    1.3   0.0      0.37   4.7e+02      24      65 ..     272     314 ..     245     318 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00072
      AAA_18  3 ltGtpGvGKttlak 16
                + G+pG+GK+t + 
  EPX73196.1  7 VVGPPGSGKSTYCF 20
                89*********995 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.37
      AAA_18  24 f...gvnlrdvakenglllevdpealdeskrldedkldklldale 65 
                 +   g+ l+dv +++++ + ++++  d+++r+ e+k  + +++++
  EPX73196.1 272 VrqgGDPLQDVSPQERWIDRREEY--DRYEREMEEKYLEESQKVN 314
                 144488999999999999999999..8888888887666555555 PP

>> KTI12  Chromatin associated protein KTI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00015       0.2       5      38 ..       6      39 ..       1      49 [. 0.91

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00015
                EEE--TTSSHHHHHHHHHHHHHHTT--EEEE-TH CS
       KTI12  5 vltGlPssGKstrakeLakaleeekrsvvvidde 38
                v+ G P sGKst+   +++ l++ +r++++++ +
  EPX73196.1  6 VVVGPPGSGKSTYCFGMHQFLSAIGRQCIIVNLD 39
                789***************************9965 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.0   0.00095       1.2       9      23 ..       6      20 ..       5      49 .. 0.82
   2 ?    0.1   0.0      0.71   9.1e+02      28      64 ..      87     124 ..      76     140 .. 0.67

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00095
      AAA_22  9 vvtGesGtGKTtllr 23
                vv+G++G+GK+t + 
  EPX73196.1  6 VVVGPPGSGKSTYCF 20
                79**********885 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.71
      AAA_22  28 qldeeakaeeerpevvfvtlpsst...sskdllrellral 64 
                 +l+ee   e +++++v +++p++    +  d l+++ + l
  EPX73196.1  87 WLCEE--LEAHKDTYVIIDCPGQVelfTDHDSLQKIISTL 124
                 44322..233788889999998876666666666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       785  (0.0437838); expected 358.6 (0.02)
Passed bias filter:                      618  (0.0344693); expected 358.6 (0.02)
Passed Vit filter:                        92  (0.00513135); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.59u 0.34s 00:00:00.93 Elapsed: 00:00:00.50
# Mc/sec: 1911.48
//
Query:       EPX73197.1  [L=219]
Description: DNAJ domain-containing protein Jac1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.2e-18   65.1   0.6    1.1e-17   64.3   0.6    1.4  1  HSCB_C     HSCB C-terminal oligomerisation domain
    4.9e-06   26.6   0.3    2.1e-05   24.5   0.0    2.1  2  DnaJ       DnaJ domain
  ------ inclusion threshold ------
      0.019   14.4   0.4      0.026   14.0   0.4    1.1  1  DUF4349    Domain of unknown function (DUF4349)
      0.024   15.1   1.1      0.039   14.4   0.4    1.8  2  DUF4094    Domain of unknown function (DUF4094)
       0.18   12.5   2.0          1   10.1   2.0    2.0  1  AATF-Che1  Apoptosis antagonizing transcription factor


Domain annotation for each model (and alignments):
>> HSCB_C  HSCB C-terminal oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.3   0.6   2.9e-21   1.1e-17       2      72 ..     145     213 ..     144     217 .. 0.93

  Alignments for each domain:
  == domain 1  score: 64.3 bits;  conditional E-value: 2.9e-21
                 -HHHHHHHHHHHHHHHCGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHH CS
      HSCB_C   2 dpefLmevMelrEeleeaeeaadkeeleelkaeveerieeleaeleeafekkdleaaadllrrlrYlekik 72 
                 dpefLm++M+++Ee+   + + ++e++e+l  e+++r  e+++++++a++++d+e aa +++rlrY++ ++
  EPX73197.1 145 DPEFLMQIMDVHEEISSSR-D-SPEKIEQLMGENNSRKSEEIQKINAAMSNADWELAALHVSRLRYWNTVD 213
                 9*****************4.4.78*************************999***************9875 PP

>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   0.0     6e-09   2.1e-05      15      62 ..      78     127 ..      68     127 .. 0.84
   2 ?   -1.1   0.0      0.59   2.1e+03      36      50 ..     177     191 ..     168     193 .. 0.73

  Alignments for each domain:
  == domain 1  score: 24.5 bits;  conditional E-value: 6e-09
                 HHHHHHHHHHHHHHSTTTSCC.HH.HHHHHHHHHHHHHHHHTSHHHHHHH CS
        DnaJ  15 deIkkaYrklalkyHPDknpk.dp.eaeekFkeineAyevLsdpekRkqY 62 
                   +++aY k+++ +HPD  ++ dp +++ k  e+++Ay++L+ p +R++Y
  EPX73197.1  78 GALRSAYLKKIKIHHPDVAKGvDPnDSQLKSAELTRAYNTLMVPLSRAEY 127
                 5689*************664415567777999***************999 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.59
                 HHHHHHHHHHHHHHH CS
        DnaJ  36 dpeaeekFkeineAy 50 
                 +++++e+ ++in+A+
  EPX73197.1 177 NSRKSEEIQKINAAM 191
                 446777788888875 PP

>> DUF4349  Domain of unknown function (DUF4349)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.4   7.2e-06     0.026      43     145 ..     107     211 ..      95     214 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 7.2e-06
     DUF4349  43 tegdersasltlRvPaarldafldelaelgkvtsrstsaeDVTeqyvDleaRlkaleasedrllall.ek.aksvedlleiereLsevqaeieslegql 139
                 ++++  +a+ tl vP  r +  l++ +   + +++s +  +   q++D+   +++ ++s +++++l+ e+ + + e++ +i+ ++s+   e+ +l  ++
  EPX73197.1 107 KSAELTRAYNTLMVPLSRAEYILQQKGISTDSENVSDKDPEFLMQIMDVHEEISSSRDSPEKIEQLMgENnSRKSEEIQKINAAMSNADWELAALHVSR 205
                 56666788888889999999999888877777777777888889***********************643477****************9999998666 PP

     DUF4349 140 ryLdnq 145
                  ++ n 
  EPX73197.1 206 LRYWNT 211
                 555555 PP

>> DUF4094  Domain of unknown function (DUF4094)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       2.6   9.3e+03      37      51 ..      55      69 ..      41      82 .. 0.57
   2 ?   14.4   0.4   1.1e-05     0.039      41      84 ..     155     200 ..     124     203 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 2.6
     DUF4094 37 elklvsedcdskdae 51
                e+ +   dcd+++ +
  EPX73197.1 55 ESYFEMFDCDPSTLQ 69
                223344678874433 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 1.1e-05
     DUF4094  41 vsedcds.kdaesrskdilg.evskthkaiqtLdktissLemeLaa 84 
                 v e+  s +d+ ++ ++++g + s+++++iq+++ ++s+   eLaa
  EPX73197.1 155 VHEEISSsRDSPEKIEQLMGeNNSRKSEEIQKINAAMSNADWELAA 200
                 5566666689999999****9************************8 PP

>> AATF-Che1  Apoptosis antagonizing transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   2.0   0.00028         1      28     137 ..     111     210 ..      11     211 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00028
   AATF-Che1  28 altaanqLpqpetlkeflesseefeealeeaekalkklleslleLreelleqneikklaeskeeeekkkskrkrkkkkkeetsleelwkeleklekalk 126
                 +++a n+L  p ++ e++ +++ +++ +e+++++  ++l +++++ ee+      +    s++++ +k ++   +++++++++++++  ++++ + +l+
  EPX73197.1 111 LTRAYNTLMVPLSRAEYILQQKGISTDSENVSDKDPEFLMQIMDVHEEI------S----SSRDSPEKIEQLMGENNSRKSEEIQKINAAMSNADWELA 199
                 5567788888888888888888999999999999999999999999999......3....344455566677777777788899999999*99999999 PP

   AATF-Che1 127 pfrnatldkWs 137
                 +   + l  W+
  EPX73197.1 200 ALHVSRLRYWN 210
                 99999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       697  (0.0388756); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1599.84
//
Query:       EPX73198.1  [L=382]
Description: RNA polymerase III transcription factor tfiiia [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.1e-30  102.9  70.2    8.1e-05   22.9   0.4   10.3 10  zf-C2H2        Zinc finger, C2H2 type
    6.8e-22   76.3  67.6     0.0021   18.8   1.9   10.2 10  zf-C2H2_4      C2H2-type zinc finger
    2.2e-13   50.0  66.8    0.00059   20.1   0.2   10.8 11  zf-H2C2_2      Zinc-finger double domain
    1.8e-11   44.2  31.5      7e-07   29.5   5.7    5.4  6  zf-C2H2_8      C2H2-type zinc ribbon
      4e-06   27.1  33.4        0.3   11.2   0.1    7.5  6  zf-C2H2_aberr  Aberrant zinc-finger
    1.2e-05   25.5  21.3       0.47   10.9   0.1    6.7  6  zf-met         Zinc-finger of C2H2 type
    1.2e-05   25.4  22.5      0.048   14.0   0.0    8.1  9  zf-C2H2_jaz    Zinc-finger double-stranded RNA-binding
     0.0029   18.2  30.2        0.1   13.2   0.8    7.8  9  FOXP-CC        FOXP coiled-coil domain
  ------ inclusion threshold ------
       0.47   10.5   0.1       0.24   11.4   0.6    6.9  6  zf-C2H2_6      C2H2-type zinc finger
        3.5    7.5  22.8       0.23   11.3   0.5    4.9  5  zf-C2H2_11     zinc-finger C2H2-type
        6.9    6.4   8.4         20    4.9   0.2    4.1  4  zf_UBZ         Ubiquitin-Binding Zinc Finger
        8.1    6.4  13.6         10    6.0   0.1    4.9  6  zf-C2H2_9      C2H2 type zinc-finger (1 copy)


Domain annotation for each model (and alignments):
>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.4   5.4e-08   8.1e-05       1      23 []      15      39 ..      15      39 .. 0.97
   2 !   18.7   3.1   1.2e-06    0.0017       1      23 []      45      69 ..      45      69 .. 0.96
   3 !    6.7   0.6    0.0072        11       1      23 []      75      99 ..      75      99 .. 0.92
   4 ?    5.0   0.1     0.026        39       1      23 []     105     130 ..     105     130 .. 0.91
   5 !   14.1   0.3   3.2e-05     0.048       1      23 []     136     161 ..     136     161 .. 0.96
   6 !   11.5   0.4   0.00022      0.33       1      23 []     167     194 ..     167     194 .. 0.84
   7 !   18.4   3.3   1.4e-06    0.0021       2      23 .]     197     218 ..     197     218 .. 0.96
   8 !   18.2   1.0   1.6e-06    0.0024       1      23 []     228     253 ..     228     253 .. 0.96
   9 !   17.2   1.3   3.3e-06    0.0049       1      20 [.     259     278 ..     259     280 .. 0.94
  10 !   14.5   1.5   2.5e-05     0.038       1      23 []     336     361 ..     336     361 .. 0.91

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 5.4e-08
                EEET..TTTEEESSHHHHHHHHHCC CS
     zf-C2H2  1 ykCp..dCgksFkrksnLkrHirtH 23
                y Cp  +C+k ++r+s+L++H+rtH
  EPX73198.1 15 YACPydECNKYYSRPSLLEQHLRTH 39
                78**********************9 PP

  == domain 2  score: 18.7 bits;  conditional E-value: 1.2e-06
                EEET..TTTEEESSHHHHHHHHHCC CS
     zf-C2H2  1 ykCp..dCgksFkrksnLkrHirtH 23
                + C+  +CgksF r+s+Lk+H+r+H
  EPX73198.1 45 FICEhiGCGKSFLRNSHLKTHLRSH 69
                789999******************9 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.0072
                EEET..TTTEEESSHHHHHHHHHCC CS
     zf-C2H2  1 ykCp..dCgksFkrksnLkrHirtH 23
                + C+  +C  sF +  +L rH  +H
  EPX73198.1 75 FSCGyeGCASSFYTLQHLLRHEVVH 99
                789999***************8777 PP

  == domain 4  score: 5.0 bits;  conditional E-value: 0.026
                 EEET..TTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   1 ykCp..dCgksFkrksnLkrHirt.H 23 
                 y C+  +C ++F    +L+ Hi   H
  EPX73198.1 105 YACTwaGCIERFAKHQQLRLHIANeH 130
                 7799999999************9888 PP

  == domain 5  score: 14.1 bits;  conditional E-value: 3.2e-05
                 EEET..TTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   1 ykCp..dCgksFkrksnLkrHirt.H 23 
                 ++C+  +C++ F++k  L++Hi + H
  EPX73198.1 136 FPCTvaGCTQGFSTKQRLQNHIDRfH 161
                 89********************9988 PP

  == domain 6  score: 11.5 bits;  conditional E-value: 0.00022
                 EEET..TTT..EEESSHHHHHHHHHC.C CS
     zf-C2H2   1 ykCp..dCg..ksFkrksnLkrHirt.H 23 
                 ykCp   C     F  +s+L+rHir  H
  EPX73198.1 167 YKCPheSCLnnLGFEKWSQLQRHIREaH 194
                 6777777777788************999 PP

  == domain 7  score: 18.4 bits;  conditional E-value: 1.4e-06
                 EETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2   2 kCpdCgksFkrksnLkrHirtH 23 
                 +C++Cgk+F++  +L++H   H
  EPX73198.1 197 TCSICGKRFRSAAHLRHHVTLH 218
                 7*****************9988 PP

  == domain 8  score: 18.2 bits;  conditional E-value: 1.6e-06
                 EEET..TTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   1 ykCp..dCgksFkrksnLkrHirt.H 23 
                 +kC   +C+ksF+r s L++H ++ H
  EPX73198.1 228 FKCFyeGCSKSFTRGSALRKHVQVtH 253
                 899999****************9988 PP

  == domain 9  score: 17.2 bits;  conditional E-value: 3.3e-06
                 EEETTTTEEESSHHHHHHHH CS
     zf-C2H2   1 ykCpdCgksFkrksnLkrHi 20 
                 + Cp Cg++F  k++L+rH 
  EPX73198.1 259 FSCPTCGMKFGYKHMLQRHT 278
                 89*****************7 PP

  == domain 10  score: 14.5 bits;  conditional E-value: 2.5e-05
                 EEET..TTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   1 ykCp..dCgksFkrksnLkrHirt.H 23 
                 ++C+  +C ++Fkr ++L rH  + H
  EPX73198.1 336 FPCTipGCQYRFKRLYDLHRHAVSyH 361
                 899999***************87766 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.4     8e-06     0.012       1      23 [.      15      39 ..      15      40 .. 0.95
   2 !   16.8   2.3   5.8e-06    0.0086       1      23 [.      45      69 ..      45      70 .. 0.96
   3 ?    6.4   1.0     0.013        20       1      23 [.      75      99 ..      75     100 .. 0.89
   4 ?    5.3   0.2     0.029        43       1      24 []     105     130 ..     105     130 .. 0.92
   5 !   15.1   0.2     2e-05      0.03       1      24 []     136     161 ..     136     161 .. 0.94
   6 !    8.9   0.6    0.0021       3.1       1      24 []     167     194 ..     167     194 .. 0.94
   7 !   18.8   1.9   1.4e-06    0.0021       2      23 ..     197     218 ..     196     219 .. 0.93
   8 !   11.7   1.0   0.00026      0.39       1      24 []     228     253 ..     228     253 .. 0.88
   9 !   10.9   0.9   0.00047       0.7       1      21 [.     259     279 ..     259     281 .. 0.89
  10 !   10.3   1.2   0.00073       1.1       1      24 []     336     361 ..     336     361 .. 0.93

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 8e-06
   zf-C2H2_4  1 fkCpi..CgksFsskkaLlrHlkth 23
                + Cp+  C+k +s+++ L +Hl+th
  EPX73198.1 15 YACPYdeCNKYYSRPSLLEQHLRTH 39
                79**********99999******** PP

  == domain 2  score: 16.8 bits;  conditional E-value: 5.8e-06
   zf-C2H2_4  1 fkCpi..CgksFsskkaLlrHlkth 23
                f+C++  CgksF ++++L++Hl++h
  EPX73198.1 45 FICEHigCGKSFLRNSHLKTHLRSH 69
                89**********************9 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.013
   zf-C2H2_4  1 fkCpi..CgksFsskkaLlrHlkth 23
                f C +  C  sF + ++LlrH   h
  EPX73198.1 75 FSCGYegCASSFYTLQHLLRHEVVH 99
                7899999**************9887 PP

  == domain 4  score: 5.3 bits;  conditional E-value: 0.029
   zf-C2H2_4   1 fkCpi..CgksFsskkaLlrHlkthH 24 
                 + C++  C ++F  +++L+ H+++ H
  EPX73198.1 105 YACTWagCIERFAKHQQLRLHIANEH 130
                 7899999***************9988 PP

  == domain 5  score: 15.1 bits;  conditional E-value: 2e-05
   zf-C2H2_4   1 fkCpi..CgksFsskkaLlrHlkthH 24 
                 f+C++  C++ Fs+k++L++H+ + H
  EPX73198.1 136 FPCTVagCTQGFSTKQRLQNHIDRFH 161
                 89*******************99887 PP

  == domain 6  score: 8.9 bits;  conditional E-value: 0.0021
   zf-C2H2_4   1 fkCpi..C..gksFsskkaLlrHlkthH 24 
                 +kCp+  C  +  F  +++L+rH++  H
  EPX73198.1 167 YKCPHesClnNLGFEKWSQLQRHIREAH 194
                 89**********************9877 PP

  == domain 7  score: 18.8 bits;  conditional E-value: 1.4e-06
   zf-C2H2_4   2 kCpiCgksFsskkaLlrHlkth 23 
                 +C+iCgk+F+s  +L++H+  h
  EPX73198.1 197 TCSICGKRFRSAAHLRHHVTLH 218
                 6*****************9988 PP

  == domain 8  score: 11.7 bits;  conditional E-value: 0.00026
   zf-C2H2_4   1 fkCpi..CgksFsskkaLlrHlkthH 24 
                 fkC +  C+ksF++ +aL++H++  H
  EPX73198.1 228 FKCFYegCSKSFTRGSALRKHVQVTH 253
                 7899999*****99999****98766 PP

  == domain 9  score: 10.9 bits;  conditional E-value: 0.00047
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlk 21 
                 f Cp Cg  F  k+ L+rH +
  EPX73198.1 259 FSCPTCGMKFGYKHMLQRHTE 279
                 89********99999****65 PP

  == domain 10  score: 10.3 bits;  conditional E-value: 0.00073
   zf-C2H2_4   1 fkCpi..CgksFsskkaLlrHlkthH 24 
                 f+C+i  C+ +F++ ++L rH  + H
  EPX73198.1 336 FPCTIpgCQYRFKRLYDLHRHAVSYH 361
                 89*******************98877 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.4     0.016        24      13      25 ..      12      27 ..       8      28 .. 0.80
   2 !   16.1   0.4   7.3e-06     0.011       2      25 ..      32      57 ..      32      58 .. 0.93
   3 !   14.9   1.2   1.8e-05     0.027       1      24 [.      61      86 ..      61      88 .. 0.85
   4 !   11.4   0.6   0.00023      0.34       1      24 [.      91     116 ..      91     118 .. 0.82
   5 !    8.6   0.2    0.0017       2.6       2      25 ..     122     148 ..     121     149 .. 0.81
   6 ?    3.0   1.0      0.11   1.6e+02       2      20 ..     153     174 ..     152     177 .. 0.71
   7 !   11.2   0.2   0.00026      0.39       2      25 ..     186     206 ..     185     207 .. 0.86
   8 ?    1.5   3.7       0.3   4.6e+02       1      26 []     210     241 ..     210     241 .. 0.78
   9 !   20.1   0.2     4e-07   0.00059       1      25 [.     244     269 ..     244     270 .. 0.92
  10 ?   -0.8   0.3       1.6   2.4e+03       4      13 ..     271     281 ..     270     285 .. 0.65
  11 ?   -0.3   0.4       1.2   1.7e+03      15      26 .]     336     349 ..     332     349 .. 0.76

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.016
   zf-H2C2_2 13 kp.yeCp..lCdkaFk 25
                k+ y Cp  +C+k+++
  EPX73198.1 12 KRaYACPydECNKYYS 27
                444****999***997 PP

  == domain 2  score: 16.1 bits;  conditional E-value: 7.3e-06
   zf-H2C2_2  2 LrrHirkHtgekpyeCp..lCdkaFk 25
                L++H+r+H +e+p+ C+   C+k+F 
  EPX73198.1 32 LEQHLRTHSNERPFICEhiGCGKSFL 57
                799**************988*****6 PP

  == domain 3  score: 14.9 bits;  conditional E-value: 1.8e-05
   zf-H2C2_2  1 nLrrHirkHtgekpyeCp..lCdkaF 24
                +L+ H+r+Ht+ kp+ C    C+ +F
  EPX73198.1 61 HLKTHLRSHTNIKPFSCGyeGCASSF 86
                799**************865587777 PP

  == domain 4  score: 11.4 bits;  conditional E-value: 0.00023
   zf-H2C2_2   1 nLrrHirkHtgekpyeCp..lCdkaF 24 
                 +L rH  +H++++py C    C  +F
  EPX73198.1  91 HLLRHEVVHKKPRPYACTwaGCIERF 116
                 688**************875576666 PP

  == domain 5  score: 8.6 bits;  conditional E-value: 0.0017
   zf-H2C2_2   2 LrrHirk.HtgekpyeCp..lCdkaFk 25 
                 Lr Hi++ Ht  +p+ C    C   F+
  EPX73198.1 122 LRLHIANeHTHSSPFPCTvaGCTQGFS 148
                 899***55*********9655777776 PP

  == domain 6  score: 3.0 bits;  conditional E-value: 0.11
   zf-H2C2_2   2 LrrHi.rkHtgekpyeCp..lC 20 
                 L+ Hi r+H +   y+Cp  +C
  EPX73198.1 153 LQNHIdRFHEKIVTYKCPheSC 174
                 78899456865444****7667 PP

  == domain 7  score: 11.2 bits;  conditional E-value: 0.00026
   zf-H2C2_2   2 LrrHirkHtgekpyeCplCdkaFk 25 
                 L+rHir+ +++   +C+ C+k+F 
  EPX73198.1 186 LQRHIREAHVP---TCSICGKRFR 206
                 89*****6666...7*******96 PP

  == domain 8  score: 1.5 bits;  conditional E-value: 0.3
   zf-H2C2_2   1 nLrrHirkHt...gekp.yeCp..lCdkaFkt 26 
                 +Lr H   H+    e++ ++C    C+k+F++
  EPX73198.1 210 HLRHHVTLHMttlEERKsFKCFyeGCSKSFTR 241
                 688888888889966545****766*****85 PP

  == domain 9  score: 20.1 bits;  conditional E-value: 4e-07
   zf-H2C2_2   1 nLrrHirk.HtgekpyeCplCdkaFk 25 
                 +Lr+H  + H g  p+ Cp C+ +F 
  EPX73198.1 244 ALRKHVQVtHEGVLPFSCPTCGMKFG 269
                 79*****66***************97 PP

  == domain 10  score: -0.8 bits;  conditional E-value: 1.6
   zf-H2C2_2   4 rHir.kHtgek 13 
                 +H+   Ht ++
  EPX73198.1 271 KHMLqRHTEKS 281
                 68863588665 PP

  == domain 11  score: -0.3 bits;  conditional E-value: 1.2
   zf-H2C2_2  15 yeCp..lCdkaFkt 26 
                 + C    C ++Fk+
  EPX73198.1 336 FPCTipGCQYRFKR 349
                 6777667*****96 PP

>> zf-C2H2_8  C2H2-type zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.4      0.14   2.1e+02      31      60 ..      40      69 ..      10      70 .. 0.64
   2 !   29.5   5.7   4.7e-10     7e-07       2      95 ..      47     133 ..      44     137 .. 0.80
   3 !    9.1   0.5    0.0011       1.6      36      85 ..     136     189 ..     133     196 .. 0.75
   4 ?    5.4   0.6     0.015        23       8      40 ..     177     209 ..     168     213 .. 0.84
   5 !   11.5   7.0   0.00019      0.28      13      95 ..     207     289 ..     196     292 .. 0.76
   6 ?    4.7   0.0     0.025        37      59      85 ..     328     356 ..     316     366 .. 0.69

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.14
   zf-C2H2_8 31 legklfrcstascaetfpsmqelvahtklh 60
                ++ + f c    c ++f     l +h + h
  EPX73198.1 40 SNERPFICEHIGCGKSFLRNSHLKTHLRSH 69
                345678888888888888877777776655 PP

  == domain 2  score: 29.5 bits;  conditional E-value: 4.7e-10
   zf-C2H2_8   2 cssygcrlafpnvrelaqhlrvhlsptqslegklfrcstascaetfpsmqelvahtklhykpnryfkc.encllrfrthrslfkhlhvcsdqshs 95 
                 c   gc  +f       +hl++hl+ +   + k f c    ca +f ++q l+ h  +h kp  y      c+ rf  h+ l   lh+  +++hs
  EPX73198.1  47 CEHIGCGKSFLRN----SHLKTHLRSHT--NIKPFSCGYEGCASSFYTLQHLLRHEVVHKKPRPYACTwAGCIERFAKHQQL--RLHIANEHTHS 133
                 6667777777655....55555555554..4589****************************888643368*********99..69999999997 PP

  == domain 3  score: 9.1 bits;  conditional E-value: 0.0011
   zf-C2H2_8  36 frcstascaetfpsmqelvahtklhykpnryfkc..encl..lrfrthrslfkh 85 
                 f c+ a c++ f + q l  h    +     +kc  e cl  l f     l +h
  EPX73198.1 136 FPCTVAGCTQGFSTKQRLQNHIDRFHEKIVTYKCphESCLnnLGFEKWSQLQRH 189
                 88*******************865555556668866889844556666666666 PP

  == domain 4  score: 5.4 bits;  conditional E-value: 0.015
   zf-C2H2_8   8 rlafpnvrelaqhlrvhlsptqslegklfrcst 40 
                  l f +  +l +h+r    pt s+ gk+fr ++
  EPX73198.1 177 NLGFEKWSQLQRHIREAHVPTCSICGKRFRSAA 209
                 688999999********************9876 PP

  == domain 5  score: 11.5 bits;  conditional E-value: 0.00019
   zf-C2H2_8  13 nvrelaqhlrvhlsptqslegklfrcstascaetfpsmqelvahtklhykpnryfkcencllrfrthrslfkhlh..vcsdqshs 95 
                 ++ +l +h  v+l+ t   e k f+c    c+++f     l  h ++ +     f c  c ++f  +  l +h     c +   s
  EPX73198.1 207 SAAHLRHH--VTLHMTTLEERKSFKCFYEGCSKSFTRGSALRKHVQVTHEGVLPFSCPTCGMKFGYKHMLQRHTEksACPELNAS 289
                 33333333..33444566789********************************************99999999752256565555 PP

  == domain 6  score: 4.7 bits;  conditional E-value: 0.025
   zf-C2H2_8  59 lhykpnryfkce..ncllrfrthrslfkh 85 
                   y  nr+f c    c  rf+    l +h
  EPX73198.1 328 YGYEDNRFFPCTipGCQYRFKRLYDLHRH 356
                 56889999999733577777666566555 PP

>> zf-C2H2_aberr  Aberrant zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.2    0.0023       3.4       1      25 [.      15      39 ..      15      43 .. 0.91
   2 ?    3.4   0.6     0.052        78     140     162 ..      44      66 ..      39      72 .. 0.76
   3 !    6.3   0.6    0.0064       9.5       1      66 [.     105     162 ..     105     166 .. 0.78
   4 !    7.4   0.0    0.0029       4.3       1      25 [.     167     193 ..     167     197 .. 0.92
   5 !    6.5   3.5    0.0057       8.6       1      24 [.     228     251 ..     197     294 .. 0.64
   6 !   11.2   0.1    0.0002       0.3     136     166 ..     331     361 ..     315     366 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0023
  zf-C2H2_aberr  1 ykClykaCdlkyssvlglrrhlvey 25
                   y C+y +C+  ys+   l++hl++ 
     EPX73198.1 15 YACPYDECNKYYSRPSLLEQHLRTH 39
                   89********************975 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.052
  zf-C2H2_aberr 140 liyCripGCgkrfkslmaYkYhc 162
                     + C+ +GCgk+f      k h 
     EPX73198.1  44 PFICEHIGCGKSFLRNSHLKTHL 66 
                    589**********8776666665 PP

  == domain 3  score: 6.3 bits;  conditional E-value: 0.0064
  zf-C2H2_aberr   1 ykClykaCdlkyssvlglrrhlveykhslytnsefslkCpvrkCsesivelentelleehlekeha 66 
                    y C +  C   + + + lr h+ + +h   t+s   + C v  C      +++++ l++h+++ h 
     EPX73198.1 105 YACTWAGCIERFAKHQQLRLHIAN-EH---THS-SPFPCTVAGC---TQGFSTKQRLQNHIDRFHE 162
                    789999999999999999999975.56...333.5678999999...6678889999999999886 PP

  == domain 4  score: 7.4 bits;  conditional E-value: 0.0029
  zf-C2H2_aberr   1 ykClykaC..dlkyssvlglrrhlvey 25 
                    ykC++++C  +l +++   l+rh++e+
     EPX73198.1 167 YKCPHESClnNLGFEKWSQLQRHIREA 193
                    9*******88899***********986 PP

  == domain 5  score: 6.5 bits;  conditional E-value: 0.0057
  zf-C2H2_aberr   1 ykClykaCdlkyssvlglrrhlve 24 
                    +kC+y+ C   + +  +lr+h++ 
     EPX73198.1 228 FKCFYEGCSKSFTRGSALRKHVQV 251
                    455555555555555555555543 PP

  == domain 6  score: 11.2 bits;  conditional E-value: 0.0002
  zf-C2H2_aberr 136 dkkdliyCripGCgkrfkslmaYkYhckkfl 166
                    +++ ++ C ipGC  rfk l     h+  ++
     EPX73198.1 331 EDNRFFPCTIPGCQYRFKRLYDLHRHAVSYH 361
                    4445899*************99999998884 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.1   0.00062      0.92       6      21 ..      22      37 ..      20      40 .. 0.93
   2 !    7.0   1.4    0.0052       7.8       6      24 ..      52      70 ..      52      71 .. 0.93
   3 ?   -2.1   0.0       3.9   5.9e+03      13      21 ..     183     191 ..     179     191 .. 0.80
   4 !   10.9   0.1   0.00032      0.47       2      19 ..     197     214 ..     196     215 .. 0.89
   5 ?    4.3   0.0     0.037        56       6      21 ..     235     250 ..     233     250 .. 0.93
   6 ?    3.4   0.1     0.074   1.1e+02       1      19 [.     259     277 ..     259     279 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00062
      zf-met  6 CnvtfnsesqlksHlq 21
                Cn++++ +s l++Hl+
  EPX73198.1 22 CNKYYSRPSLLEQHLR 37
                ***************8 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0052
      zf-met  6 CnvtfnsesqlksHlqGKk 24
                C ++f   s+lk+Hl++++
  EPX73198.1 52 CGKSFLRNSHLKTHLRSHT 70
                999**************85 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 3.9
      zf-met  13 esqlksHlq 21 
                 +sql+ H +
  EPX73198.1 183 WSQLQRHIR 191
                 79*****75 PP

  == domain 4  score: 10.9 bits;  conditional E-value: 0.00032
      zf-met   2 yCelCnvtfnsesqlksH 19 
                 +C++C ++f s ++l+ H
  EPX73198.1 197 TCSICGKRFRSAAHLRHH 214
                 6************99855 PP

  == domain 5  score: 4.3 bits;  conditional E-value: 0.037
      zf-met   6 CnvtfnsesqlksHlq 21 
                 C ++f+  s+l+ H q
  EPX73198.1 235 CSKSFTRGSALRKHVQ 250
                 **************76 PP

  == domain 6  score: 3.4 bits;  conditional E-value: 0.074
      zf-met   1 fyCelCnvtfnsesqlksH 19 
                 f C+ C ++f  +  l+ H
  EPX73198.1 259 FSCPTCGMKFGYKHMLQRH 277
                 79********888888888 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.0   3.2e-05     0.048       6      24 ..      21      39 ..      20      40 .. 0.93
   2 !    7.5   0.4    0.0035       5.2       7      24 ..      52      69 ..      44      69 .. 0.90
   3 ?    0.0   0.1      0.75   1.1e+03      11      21 ..     116     126 ..     114     128 .. 0.90
   4 ?    1.3   0.0      0.29   4.4e+02      11      21 ..     147     157 ..     146     158 .. 0.91
   5 ?   -1.1   0.0       1.7   2.5e+03      15      22 ..     184     191 ..     179     192 .. 0.82
   6 !    6.3   0.0    0.0083        12       3      20 ..     197     214 ..     195     216 .. 0.87
   7 ?    2.5   0.0      0.13     2e+02       7      21 ..     235     249 ..     234     250 .. 0.94
   8 ?    2.4   0.1      0.14   2.1e+02       2      20 ..     259     277 ..     258     279 .. 0.83
   9 ?   -2.8   0.2         6   8.9e+03       7      20 ..     343     356 ..     343     356 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 3.2e-05
                 TTTBBBSSHHHHHCCTTSH CS
  zf-C2H2_jaz  6 lCdKyFksenaldnHlkSK 24
                 +C+Ky++  + l++Hl+++
   EPX73198.1 21 ECNKYYSRPSLLEQHLRTH 39
                 6****************97 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0035
                 TTBBBSSHHHHHCCTTSH CS
  zf-C2H2_jaz  7 CdKyFksenaldnHlkSK 24
                 C K F   + l++Hl+S+
   EPX73198.1 52 CGKSFLRNSHLKTHLRSH 69
                 ****************97 PP

  == domain 3  score: 0.0 bits;  conditional E-value: 0.75
                  BSSHHHHHCCT CS
  zf-C2H2_jaz  11 FksenaldnHl 21 
                  F ++++l+ H+
   EPX73198.1 116 FAKHQQLRLHI 126
                  999*******8 PP

  == domain 4  score: 1.3 bits;  conditional E-value: 0.29
                  BSSHHHHHCCT CS
  zf-C2H2_jaz  11 FksenaldnHl 21 
                  F++ + l+nH+
   EPX73198.1 147 FSTKQRLQNHI 157
                  99********8 PP

  == domain 5  score: -1.1 bits;  conditional E-value: 1.7
                  HHHHCCTT CS
  zf-C2H2_jaz  15 naldnHlk 22 
                  ++l+ H++
   EPX73198.1 184 SQLQRHIR 191
                  79****97 PP

  == domain 6  score: 6.3 bits;  conditional E-value: 0.0083
                  BBTTTTBBBSSHHHHHCC CS
  zf-C2H2_jaz   3 YCvlCdKyFksenaldnH 20 
                   C +C K F s+  l+ H
   EPX73198.1 197 TCSICGKRFRSAAHLRHH 214
                  5**********9999877 PP

  == domain 7  score: 2.5 bits;  conditional E-value: 0.13
                  TTBBBSSHHHHHCCT CS
  zf-C2H2_jaz   7 CdKyFksenaldnHl 21 
                  C+K F   +al++H+
   EPX73198.1 235 CSKSFTRGSALRKHV 249
                  **************6 PP

  == domain 8  score: 2.4 bits;  conditional E-value: 0.14
                  CBBTTTTBBBSSHHHHHCC CS
  zf-C2H2_jaz   2 fYCvlCdKyFksenaldnH 20 
                  f C++C   F   + l+ H
   EPX73198.1 259 FSCPTCGMKFGYKHMLQRH 277
                  89*****999877777777 PP

  == domain 9  score: -2.8 bits;  conditional E-value: 6
                  TTBBBSSHHHHHCC CS
  zf-C2H2_jaz   7 CdKyFksenaldnH 20 
                  C+  Fk  ++l  H
   EPX73198.1 343 CQYRFKRLYDLHRH 356
                  89999988888877 PP

>> FOXP-CC  FOXP coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       3.3     5e+03       7      29 ..      17      39 ..      15      43 .. 0.79
   2 ?    1.2   0.3       0.4   5.9e+02       7      31 ..      47      71 ..      45      78 .. 0.85
   3 ?    1.0   0.0      0.46   6.9e+02       7      25 ..      77      95 ..      74     103 .. 0.87
   4 !   13.2   0.8   6.8e-05       0.1       6      33 ..     106     133 ..     103     138 .. 0.94
   5 ?    3.1   0.1       0.1   1.5e+02       7      31 ..     138     162 ..     137     168 .. 0.89
   6 ?    0.7   0.2      0.55   8.3e+02      16      33 ..     180     197 ..     168     212 .. 0.85
   7 ?    5.5   0.0     0.018        27       6      31 ..     229     254 ..     226     256 .. 0.92
   8 ?   -2.9   0.1       7.4   1.1e+04      10      27 ..     262     279 ..     261     284 .. 0.59
   9 !    9.2   0.0    0.0012       1.9       7      32 ..     338     363 ..     336     375 .. 0.92

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 3.3
     FOXP-CC  7 CkWPgCekvledveeflkhlnse 29
                C   +C+k  +  + + +hl+++
  EPX73198.1 17 CPYDECNKYYSRPSLLEQHLRTH 39
                77778999999999999999764 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.4
     FOXP-CC  7 CkWPgCekvledveeflkhlnseHa 31
                C+  gC k +   +++  hl+s+ +
  EPX73198.1 47 CEHIGCGKSFLRNSHLKTHLRSHTN 71
                77779***************98765 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.46
     FOXP-CC  7 CkWPgCekvledveeflkh 25
                C   gC + + +++++l+h
  EPX73198.1 77 CGYEGCASSFYTLQHLLRH 95
                8888**************9 PP

  == domain 4  score: 13.2 bits;  conditional E-value: 6.8e-05
     FOXP-CC   6 vCkWPgCekvledveeflkhlnseHald 33 
                  C W gC + + +++++  h+ +eH+++
  EPX73198.1 106 ACTWAGCIERFAKHQQLRLHIANEHTHS 133
                 6************************987 PP

  == domain 5  score: 3.1 bits;  conditional E-value: 0.1
     FOXP-CC   7 CkWPgCekvledveeflkhlnseHa 31 
                 C   gC + +++ +++++h+++ H+
  EPX73198.1 138 CTVAGCTQGFSTKQRLQNHIDRFHE 162
                 66669***************99996 PP

  == domain 6  score: 0.7 bits;  conditional E-value: 0.55
     FOXP-CC  16 ledveeflkhlnseHald 33 
                 +e+ +++++h++++H ++
  EPX73198.1 180 FEKWSQLQRHIREAHVPT 197
                 688899*********875 PP

  == domain 7  score: 5.5 bits;  conditional E-value: 0.018
     FOXP-CC   6 vCkWPgCekvledveeflkhlnseHa 31 
                  C   gC+k ++  +++ kh++ +H+
  EPX73198.1 229 KCFYEGCSKSFTRGSALRKHVQVTHE 254
                 59999*****************9996 PP

  == domain 8  score: -2.9 bits;  conditional E-value: 7.4
     FOXP-CC  10 PgCekvledveeflkhln 27 
                 P C   +   + +++h +
  EPX73198.1 262 PTCGMKFGYKHMLQRHTE 279
                 556666666666666654 PP

  == domain 9  score: 9.2 bits;  conditional E-value: 0.0012
     FOXP-CC   7 CkWPgCekvledveeflkhlnseHal 32 
                 C  PgC+  ++ + ++++h+ s H+l
  EPX73198.1 338 CTIPGCQYRFKRLYDLHRHAVSYHDL 363
                 999*********************87 PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   1.1      0.31   4.7e+02       5      24 ..      20      39 ..      14      42 .. 0.82
   2 ?    1.4   1.7      0.23   3.4e+02       7      24 ..      52      69 ..      52      70 .. 0.76
   3 ?   11.4   0.6   0.00016      0.24       4      20 ..     198     214 ..     197     220 .. 0.81
   4 ?   10.5   0.1   0.00032      0.47       7      20 ..     235     248 ..     233     255 .. 0.94
   5 ?    0.3   0.2       0.5   7.5e+02       2      12 ..     259     269 ..     259     270 .. 0.79
   6 ?   -0.6   0.2      0.99   1.5e+03       7      21 ..     343     357 ..     336     362 .. 0.76

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.31
   zf-C2H2_6  5 svCsksFpslqaLggHkksH 24
                ++C+k ++    L+ H+++H
  EPX73198.1 20 DECNKYYSRPSLLEQHLRTH 39
                68888888888899999999 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.23
   zf-C2H2_6  7 CsksFpslqaLggHkksH 24
                C+ksF     L +H++sH
  EPX73198.1 52 CGKSFLRNSHLKTHLRSH 69
                788887777788888888 PP

  == domain 3  score: 11.4 bits;  conditional E-value: 0.00016
   zf-C2H2_6   4 CsvCsksFpslqaLggH 20 
                 Cs+C+k+F+s   L+ H
  EPX73198.1 198 CSICGKRFRSAAHLRHH 214
                 *********97666666 PP

  == domain 4  score: 10.5 bits;  conditional E-value: 0.00032
   zf-C2H2_6   7 CsksFpslqaLggH 20 
                 CsksF  + aL++H
  EPX73198.1 235 CSKSFTRGSALRKH 248
                 ************** PP

  == domain 5  score: 0.3 bits;  conditional E-value: 0.5
   zf-C2H2_6   2 heCsvCsksFp 12 
                 + C++C+  F+
  EPX73198.1 259 FSCPTCGMKFG 269
                 67****97776 PP

  == domain 6  score: -0.6 bits;  conditional E-value: 0.99
   zf-C2H2_6   7 CsksFpslqaLggHk 21 
                 C  +F+ l++L  H 
  EPX73198.1 343 CQYRFKRLYDLHRHA 357
                 777999999998885 PP

>> zf-C2H2_11  zinc-finger C2H2-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.1       3.9   5.9e+03      12      24 ..      24      36 ..      21      37 .. 0.52
   2 ?   -2.4   0.2       2.8   4.2e+03      20      28 ..     186     194 ..     185     194 .. 0.78
   3 ?    3.5   2.0     0.041        61       7      24 ..     198     215 ..     196     218 .. 0.91
   4 ?    6.2   0.3    0.0056       8.4       9      28 ..     234     253 ..     224     254 .. 0.80
   5 ?   11.3   0.5   0.00015      0.23       7      23 ..     261     277 ..     259     279 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 3.9
  zf-C2H2_11 12 lcftSqls.LsRHl 24
                  + S +s L  Hl
  EPX73198.1 24 K-YYSRPSlLEQHL 36
                3.445555167777 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 2.8
  zf-C2H2_11  20 LsRHlfIvH 28 
                 L+RH +  H
  EPX73198.1 186 LQRHIREAH 194
                 89**98555 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.041
  zf-C2H2_11   7 CleCGlcftSqlsLsRHl 24 
                 C  CG  f S+  L+ H 
  EPX73198.1 198 CSICGKRFRSAAHLRHHV 215
                 999************996 PP

  == domain 4  score: 6.2 bits;  conditional E-value: 0.0056
  zf-C2H2_11   9 eCGlcftSqlsLsRHlfIvH 28 
                  C   ft   +L++H +++H
  EPX73198.1 234 GCSKSFTRGSALRKHVQVTH 253
                 4888999999********** PP

  == domain 5  score: 11.3 bits;  conditional E-value: 0.00015
  zf-C2H2_11   7 CleCGlcftSqlsLsRH 23 
                 C  CG++f  + +L+RH
  EPX73198.1 261 CPTCGMKFGYKHMLQRH 277
                 99*************** PP

>> zf_UBZ  Ubiquitin-Binding Zinc Finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.21   3.1e+02       6      18 ..      20      33 ..      14      36 .. 0.75
   2 ?   -1.8   0.1       1.6   2.5e+03       8      15 ..      52      59 ..      45      66 .. 0.71
   3 ?    4.9   0.2     0.014        20       4      20 ..     197     213 ..     196     214 .. 0.82
   4 ?    2.7   0.1     0.066        98       3      12 ..     259     268 ..     258     277 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.21
      zf_UBZ  6 erCgkeipes.elq 18
                ++C+k+ + +  l+
  EPX73198.1 20 DECNKYYSRPsLLE 33
                69****99994555 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 1.6
      zf_UBZ  8 Cgkeipes 15
                Cgk+++ +
  EPX73198.1 52 CGKSFLRN 59
                99999876 PP

  == domain 3  score: 4.9 bits;  conditional E-value: 0.014
      zf_UBZ   4 lCerCgkeipeselqEH 20 
                 +C+ Cgk++ +++   H
  EPX73198.1 197 TCSICGKRFRSAAHLRH 213
                 7*******988866655 PP

  == domain 4  score: 2.7 bits;  conditional E-value: 0.066
      zf_UBZ   3 ylCerCgkei 12 
                 + C+ Cg ++
  EPX73198.1 259 FSCPTCGMKF 268
                 79*****986 PP

>> zf-C2H2_9  C2H2 type zinc-finger (1 copy)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1       2.5   3.8e+03       7      28 ..     112     133 ..     111     135 .. 0.74
   2 ?   -3.7   0.0       7.8   1.2e+04      10      21 ..     146     157 ..     143     162 .. 0.58
   3 ?    0.8   0.1      0.29   4.3e+02       6      23 ..     173     192 ..     167     194 .. 0.67
   4 ?    6.0   0.1     0.007        10       2      24 ..     196     219 ..     195     227 .. 0.82
   5 ?    4.2   0.2     0.026        39       4      20 ..     261     277 ..     259     287 .. 0.81
   6 ?    0.6   0.0      0.34   5.1e+02       5      23 ..     341     359 ..     338     363 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 2.5
                 T--B-SSHHHHHHHHHHHTSSS CS
   zf-C2H2_9   7 CevkfnswkdlseHilsaasks 28 
                 C  +f + ++l  Hi ++ ++s
  EPX73198.1 112 CIERFAKHQQLRLHIANEHTHS 133
                 6777888889999997776665 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 7.8
                 B-SSHHHHHHHH CS
   zf-C2H2_9  10 kfnswkdlseHi 21 
                  f + ++l +Hi
  EPX73198.1 146 GFSTKQRLQNHI 157
                 556666666666 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.29
                 TT--B..-SSHHHHHHHHHH CS
   zf-C2H2_9   6 vCevk..fnswkdlseHils 23 
                 +C ++  f++w++l  Hi +
  EPX73198.1 173 SCLNNlgFEKWSQLQRHIRE 192
                 576551166********965 PP

  == domain 4  score: 6.0 bits;  conditional E-value: 0.007
                 -B-TTT--B-SSHHHHHHHH.HHH CS
   zf-C2H2_9   2 plCPvCevkfnswkdlseHi.lsa 24 
                 p C +C  +f+s ++l +H+ l +
  EPX73198.1 196 PTCSICGKRFRSAAHLRHHVtLHM 219
                 89*****************96544 PP

  == domain 5  score: 4.2 bits;  conditional E-value: 0.026
                 -TTT--B-SSHHHHHHH CS
   zf-C2H2_9   4 CPvCevkfnswkdlseH 20 
                 CP C +kf   + l  H
  EPX73198.1 261 CPTCGMKFGYKHMLQRH 277
                 ********877777776 PP

  == domain 6  score: 0.6 bits;  conditional E-value: 0.34
                 TTT--B-SSHHHHHHHHHH CS
   zf-C2H2_9   5 PvCevkfnswkdlseHils 23 
                 P C+ +f+ + dl  H +s
  EPX73198.1 341 PGCQYRFKRLYDLHRHAVS 359
                 99***********999754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       728  (0.0406046); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                        21  (0.00117129); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.64u 0.33s 00:00:00.97 Elapsed: 00:00:00.55
# Mc/sec: 2086.97
//
Query:       EPX73199.1  [L=461]
Description: pig-W [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-32  112.4   4.1    1.9e-32  112.4   4.1    3.5  3  GWT1      GWT1
  ------ inclusion threshold ------
      0.042   14.0   0.4      0.042   14.0   0.4    3.0  3  DUF2178   Predicted membrane protein (DUF2178)
      0.076   12.5   8.6       0.24   10.9   1.3    3.3  3  DUF1129   Protein of unknown function (DUF1129)


Domain annotation for each model (and alignments):
>> GWT1  GWT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   1.2     0.068   4.1e+02      78     140 ..     118     203 ..      17     206 .. 0.63
   2 ?   -1.9   3.7      0.55   3.3e+03      62     102 ..     229     267 ..     158     277 .. 0.54
   3 !  112.4   4.1   3.2e-36   1.9e-32       1     149 []     287     421 ..     287     421 .. 0.90

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.068
        GWT1  78 vSRrlaNlpYvlwvvalnltllllflliel.lfv........................ekeeekerkekatstvleainrngLlvFLl 140
                   Rr+a +++  +   ++l+ ++++l++++ +f+                        + ++  ++++ +++  ++++  n  ++FLl
  EPX73199.1 118 FDRRIASVTF--YRSQMMLATITCILAVDFpFFPrkhakvetwgislmdfgvgsfmfsSGTVVGRKNDIQSPGAFKKVLFNAFALFLL 203
                 3677776665..4445566666777777777676666666666666666666666655444455555555566666666666666665 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.55
        GWT1  62 illlllllllelyvefvSRrlaNlpYvlwvvalnltllllf 102
                 ++++l   ++++++ +  + l  l+Y+ + ++++l+ l+l+
  EPX73199.1 229 FFFTLS--FMSVTIFILRKLLSKLSYFYLATSVTLIHLFLL 267
                 122211..111111112233445667666666666665555 PP

  == domain 3  score: 112.4 bits;  conditional E-value: 3.2e-36
        GWT1   1 aNkEGlfsliGylaiyllgvslgkyvlkrekeaeeeekkkkkkkkesketlkllikllllsilllllllllelyvefvSRrlaNlpYvlwvvalnltll 99 
                 +NkEG+ sl+Gy++i+l+g+++g+++l +++           +  ++ e++k ++kl++  + l++l++++ + ++ +SRrlaN pYv++v+ +n+++l
  EPX73199.1 287 QNKEGIASLLGYTSIFLYGMHTGSIILVDRP-----------RMYTRAESWKRFQKLIFPLLSLMILYFVSGFCTNGISRRLANTPYVTLVAFVNMFFL 374
                 7**************************4443...........34556777788888888888888888888999999********************** PP

        GWT1 100 llflliel.lfvekeeekerkekatstvleainrngLlvFLlaNlltGlvN 149
                 +l+ll +  +f      + +++++ +++le  n+ngL+vFLl NlltGlvN
  EPX73199.1 375 CLYLLYDAyVF----PPSFSYSERVPRILENANNNGLFVFLLGNLLTGLVN 421
                 ********877....67889999***************************9 PP

>> DUF2178  Predicted membrane protein (DUF2178)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1      0.44   2.7e+03      68     100 ..      25      60 ..      13      64 .. 0.53
   2 ?   -1.5   0.3      0.47   2.8e+03      82      98 ..     217     234 ..     191     266 .. 0.57
   3 ?   14.0   0.4     7e-06     0.042       6     106 .]     344     447 ..     332     447 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.44
     DUF2178  68 lfliallgvvliv...lksdfpeytrvgfllafsal 100
                 ++ i+l+  vl +    ++  p+   ++f++ f ++
  EPX73199.1  25 MICIGLACCVLWTsmkVRKILPAKGLASFFFEFCIF 60 
                 333333333333333345555666666777766644 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.47
     DUF2178  82 ksdfpey.trvgfllafs 98 
                 ++++ ey     f+++ s
  EPX73199.1 217 QEHVTEYgVHWNFFFTLS 234
                 333333333333333333 PP

  == domain 3  score: 14.0 bits;  conditional E-value: 7e-06
     DUF2178   6 avialvglgiwa...aignvllaviavaaGvllaillkkkve...evveDERlariaekAsrktlqillfliallgvvlivlksdfpeytrvgfllafs 98 
                 +v+ +   gi +   a+ +++++v++v ++ l ++ll             ER+ ri e+A    l ++l+ + l+g+v i+ ++   +  +++ ll+ +
  EPX73199.1 344 FVSGFCTNGI-SrrlANTPYVTLVAFVNMFFLCLYLLYDAYVfppSFSYSERVPRILENANNNGLFVFLLGNLLTGLVNILIDTL--RSSNIKGLLILT 439
                 4444444444.234577778888888888888888887776678888999***************************99995544..6789999***** PP

     DUF2178  99 allllilY 106
                 a ll+i Y
  EPX73199.1 440 AYLLIICY 447
                 9*999998 PP

>> DUF1129  Protein of unknown function (DUF1129)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.1    0.0058        34      74     163 ..     116     206 ..      97     216 .. 0.72
   2 ?   10.9   1.3     4e-05      0.24     104     196 ..     287     373 ..     275     378 .. 0.79
   3 ?    0.1   0.2     0.078   4.7e+02      83     118 ..     404     440 ..     390     450 .. 0.76

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.0058
     DUF1129  74 k...enpwlmalDnsLlllalfallfgilalfskkkqtasiGlitlllvalvgGlamvlvyrlltrekkkkkrpplwkrllilllllvvwlvl 163
                     + +  +  + s ++la ++ + ++   f + k+ + +    + l+ + +G +m+   +++ r k+  + p+++k +l+ +++l+++ ++
  EPX73199.1 116 GefdRRIASVTFYRSQMMLATITCILAVDFPFFPRKHAK-VETWGISLMDFGVGSFMFSSGTVVGR-KNDIQSPGAFKKVLFNAFALFLLGIV 206
                 233467777888999999999999999987776644433.3577788999**************99.77778888888888877777665444 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 4e-05
     DUF1129 104 kkkqtas..iGlitlllvalvgGlamvlvyrlltrekkkkkrpplwkrllilllllvvwlvlftlvallpaviNpvLpplvliiigviafvvryy 196
                 ++k+  +   G ++++l ++  G ++++    ++       r + wkr+  l++ l+++++l+++ ++ ++ i ++L    ++ +  +afv +++
  EPX73199.1 287 QNKEGIAslLGYTSIFLYGMHTGSIILVDRPRMY------TRAESWKRFQKLIFPLLSLMILYFVSGFCTNGISRRLANTPYVTL--VAFVNMFF 373
                 4443333467888999999999988887777777......59***********************************99988754..55555554 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.078
     DUF1129  83 DnsLlllalfallfgilalfskkkqtas.iGlitlll 118
                  n+L+++ l +ll+g+++++ +   +++  Gl+ l+ 
  EPX73199.1 404 NNGLFVFLLGNLLTGLVNILIDTLRSSNiKGLLILTA 440
                 6899999999999999998777666655577776654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (461 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       658  (0.0367003); expected 358.6 (0.02)
Passed bias filter:                      253  (0.0141112); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.30s 00:00:00.84 Elapsed: 00:00:00.47
# Mc/sec: 2947.02
//
Query:       EPX73200.1  [L=152]
Description: 40S ribosomal protein S11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.1e-30  103.0   0.4    1.6e-29  102.0   0.4    1.5  1  Ribosomal_S17_N  Ribosomal_S17 N-terminal
    1.9e-27   95.2   0.7    1.9e-27   95.2   0.7    1.5  2  Ribosomal_S17    Ribosomal protein S17


Domain annotation for each model (and alignments):
>> Ribosomal_S17_N  Ribosomal_S17 N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.0   0.4   1.8e-33   1.6e-29       1      69 []       8      68 ..       8      68 .. 0.94

  Alignments for each domain:
  == domain 1  score: 102.0 bits;  conditional E-value: 1.8e-33
                     --SSS----SS--------------....--------TT----GGGGS-----TTSSSSSS----S-EE CS
  Ribosomal_S17_N  1 qterafqkQetvflnkkkskeekkkkkkkkryvknvglgfktPkeAiegtYiDkKCPFtGnvsirGriL 69
                     q+era+qkQ+++f+n+k      k     +r++k+vglgfktP+eAi g+YiDkKCPF G+vsirGriL
       EPX73200.1  8 QSERAYQKQPHIFQNAK------KG--AGRRWYKDVGLGFKTPSEAIYGQYIDKKCPFVGEVSIRGRIL 68
                     89***************......22..348**************************************8 PP

>> Ribosomal_S17  Ribosomal protein S17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0      0.73   6.6e+03      12      22 ..       5      16 ..       1      22 [. 0.63
   2 !   95.2   0.7   2.1e-31   1.9e-27       1      67 [.      70     137 ..      70     138 .. 0.98

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 0.73
                   EEEEEEE.EEEE CS
  Ribosomal_S17 12 vvVrver.lvkh 22
                    vV+ er ++k+
     EPX73200.1  5 LVVQSERaYQKQ 16
                   678888844444 PP

  == domain 2  score: 95.2 bits;  conditional E-value: 2.1e-31
                    EEEEE--STTEEEEEEEEEEEETTTTEEEEEEEEEEEE-TTTS.--TT-EEEEEEECECSSSEEEEEE CS
  Ribosomal_S17   1 GvVvsdkmdkTvvVrverlvkhpkykkyvkrrkkylahdenns.vkvGDiVrieecrPlSktkrfvvv 67 
                    G+Vvs+km++T+++r+e+l+ +pky++y+kr+k++ ah ++ + +++GD+V++++crPlSkt+rf+v+
     EPX73200.1  70 GTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNVAAHVSPAFrINEGDVVTVGQCRPLSKTVRFNVL 137
                    99****************************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       375  (0.0209158); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 1056.91
//
Query:       EPX73201.1  [L=274]
Description: ribose 5-phosphate isomerase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.4e-55  187.6   0.0    1.8e-55  187.2   0.0    1.2  1  Rib_5-P_isom_A  Ribose 5-phosphate isomerase A (phosphoribois


Domain annotation for each model (and alignments):
>> Rib_5-P_isom_A  Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  187.2   0.0     1e-59   1.8e-55       2     173 .]      62     236 ..      61     236 .. 0.96

  Alignments for each domain:
  == domain 1  score: 187.2 bits;  conditional E-value: 1e-59
                     EEESSHHHHHHHHHTT--BE-GGCCSSEEEEEE--SEEETTS-EE--TTS-HHHHHHHHHTEEEEEEEEEGGGBESSTTS...S-EEEEE-GGGH CS
  Rib_5-P_isom_A   2 gvptSeqteelaeelgipllsldeveeidlaiDGaDevdedlnliKGgGgallrEKivaaaakkfiviadesKlveklgk...fpvPveVlpfal 93 
                     + pt++q++el+ + g++l + d ++++d+++DGaDevd++l++iKGgG++l++EK++   ak+++++ad++K ++ lg+   + vP+eV+p+a+
      EPX73201.1  62 FLPTGFQSKELIVTSGLRLGDPDCYPDVDVCFDGADEVDDSLQCIKGGGACLFQEKLIGFLAKRLVIVADSRKNSHMLGEfwkKGVPIEVMPMAY 156
                     68*****************************************************************************55669*********** PP

                     HHHHHHHHHTTT-EEEE-TE.TTTTEE-B-TTS-EEEEEESSSBSSSHHHHHHHHHTSTTEEEESEE-S--SEEEEEETTC CS
  Rib_5-P_isom_A  94 eavarelekllggkpelRea.kgkdgpvvTdngnlilDvkfeekiedpeelekelksipGVvetGlFlgladkvlvgkedg 173
                     ++++ +l +l  ++p+lR++  gk+gpvvTdngn+i+D++f + i+dpe l +++k ++GVve+G+F+++ +++++g++dg
      EPX73201.1 157 TSILPQLVALGALDPKLRMGaPGKAGPVVTDNGNFIIDANF-GLIKDPEGLFEKIKLLVGVVEVGIFCNMISAAYFGSQDG 236
                     ********88779******98889*****************.6889********************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (274 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       266  (0.0148363); expected 358.6 (0.02)
Passed bias filter:                      246  (0.0137208); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.28s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 1800.39
//
Query:       EPX73202.1  [L=564]
Description: CDK inhibitor Srw1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      2e-21   75.9  17.8    0.00013   22.7   0.2    6.5  6  WD40         WD domain, G-beta repeat
    5.4e-15   55.5   5.6    8.4e-06   26.0   0.3    4.4  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    2.1e-06   27.8   0.1    0.00094   19.1   0.1    2.5  2  eIF2A        Eukaryotic translation initiation factor eIF2A
  ------ inclusion threshold ------
      0.062   11.9   0.1       0.22   10.1   0.0    1.8  2  ELYS-bb      beta-propeller of ELYS nucleoporin


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   0.2   9.9e-05      0.44      12      38 .]     299     329 ..     291     329 .. 0.85
   2 !    7.4   0.2    0.0019       8.6       2      34 ..     334     365 ..     333     367 .. 0.81
   3 !   22.7   0.2   2.9e-08   0.00013       4      38 .]     377     412 ..     374     412 .. 0.94
   4 !   19.9   0.3   2.2e-07     0.001       3      38 .]     418     457 ..     417     457 .. 0.77
   5 ?    0.2   0.1      0.37   1.6e+03      11      38 .]     471     500 ..     461     500 .. 0.65
   6 !   21.7   0.0   5.8e-08   0.00026       4      38 .]     507     542 ..     505     542 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 9.9e-05
                 S....EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  12 s....vtslafspdgawlasGsdDgtvriWd 38 
                 +    vtsl++ + g+ la G+ +g v iWd
  EPX73202.1 299 WpsdtVTSLKWVQRGTHLAVGTNNGLVEIWD 329
                 24457****************99*******9 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0019
                 EEEEEEESSSS..EEEEEEETTSSE....EEEEETTSEE CS
        WD40   2 qclrtltGHss..vtslafspdgaw....lasGsdDgtv 34 
                 +++rt  GH s  v +l      aw    l+sG++D+++
  EPX73202.1 334 KKVRTMAGH-SlrVGAL------AWndhvLSSGGRDNSI 365
                 6789999**.557****......7777768899****98 PP

  == domain 3  score: 22.7 bits;  conditional E-value: 2.9e-08
                 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  rtl+ H + ++ l++s++ + lasG+ D+ +++Wd
  EPX73202.1 377 FRTLRSHrQEICNLDWSSSDNQLASGGNDNALYVWD 412
                 689****999*************************9 PP

  == domain 4  score: 19.9 bits;  conditional E-value: 2.2e-07
                 EEEEEESS.SSEEEEEEETTSSE.EEEEE..TTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgaw.lasGs..dDgtvriWd 38 
                 +l+++  H   v++l++s +++  lasG+   D+t++iW+
  EPX73202.1 418 PLYSFHDHsAAVRALSWSTHQRGiLASGGgtADQTIKIWN 457
                 67889999555****98888888446774447*******8 PP

  == domain 5  score: 0.2 bits;  conditional E-value: 0.37
                 SSEEEEEEETTSSEEEEEE..TTSEEEEEE CS
        WD40  11 ssvtslafspdgawlasGs..dDgtvriWd 38 
                 s v+sl++s+  + ++s +    + + iW+
  EPX73202.1 471 SQVCSLQWSKLTNEIVSTHgfVENEIAIWN 500
                 2499**888777778875423688888886 PP

  == domain 6  score: 21.7 bits;  conditional E-value: 5.8e-08
                 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++tl+GH + v  l+ spdg  +++G  D t+r+W+
  EPX73202.1 507 VGTLKGHtNRVLFLSMSPDGENIVTGAADETLRFWK 542
                 689****888****************99*******6 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.3   1.9e-09   8.4e-06      38      91 ..     301     353 ..     284     354 .. 0.91
   2 !   12.9   0.1   2.3e-05       0.1      36      91 ..     382     436 ..     366     437 .. 0.91
   3 !   18.7   0.4   3.6e-07    0.0016      35      90 ..     423     479 ..     410     481 .. 0.85
   4 ?    3.3   0.0     0.022     1e+02      33      71 ..     509     547 ..     493     563 .. 0.79

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 1.9e-09
  ANAPC4_WD40  38 dsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWge 91 
                  + +v+sL+W + g+ Lav++++g v++ dae  k v+++  +s  +v  l W++
   EPX73202.1 301 SDTVTSLKWVQRGTHLAVGTNNGLVEIWDAEACKKVRTMAGHSL-RVGALAWND 353
                  568************************************88887.6******86 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 2.3e-05
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWge 91 
                  ++ +e+ +L W+ +++ La + +d+++ + d  s   + s++ +s  av  l+W+ 
   EPX73202.1 382 SHRQEICNLDWSSSDNQLASGGNDNALYVWDKFSDVPLYSFHDHSA-AVRALSWST 436
                  67899************************************99999.6******85 PP

  == domain 3  score: 18.7 bits;  conditional E-value: 3.6e-07
  ANAPC4_WD40  35 dkedsevrsLaWkpdgk.lLav..aysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  ++++  vr+L+W+   + +La   +++d ++++ + + g ++h ++++s+  v++l+W+
   EPX73202.1 423 HDHSAAVRALSWSTHQRgILASggGTADQTIKIWNTHRGSLIHDINTGSQ--VCSLQWS 479
                  567889******99887477774458999*******************99..******8 PP

  == domain 4  score: 3.3 bits;  conditional E-value: 0.022
  ANAPC4_WD40  33 eedkedsevrsLaWkpdgklLavaysdgevrlldaesgk 71 
                  + +++ ++v  L+ +pdg+ ++ + +d ++r+ +  + k
   EPX73202.1 509 TLKGHTNRVLFLSMSPDGENIVTGAADETLRFWKLFDSK 547
                  347889999********************9987766555 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.1   0.0    0.0021       9.3      92     142 ..     292     340 ..     278     354 .. 0.73
   2 !   19.1   0.1   2.1e-07   0.00094      27     163 ..     394     534 ..     378     548 .. 0.75

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0021
                 CEEEEEE.EEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE CS
       eIF2A  92 vkviskl.eeqkrNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakae 142
                 vkv++++  ++   ++++ ++g+ ++++     +G +eiwd + +kk+ ++ 
  EPX73202.1 292 VKVMHNFwPSDTVTSLKWVQRGTHLAVGT---NNGLVEIWDAEACKKVRTMA 340
                 56666652334556688999999888765...4577***********99875 PP

  == domain 2  score: 19.1 bits;  conditional E-value: 2.1e-07
                 E--TT-CEEEEEEEEEES.SSTT--EEECCEESSS.EEEEEE-TTSS-EEEEES.SSSCEEEEEEC.SCEEEEEEEEE.S--EEEE-TT.SSEEEEE-T CS
       eIF2A  27 evdktnksyygetelyli.klkkkksevvelkkegpihdvaWspkskefaviyG.kmpakvslfdl.kvkviskleeq.krNtiffspk.gklvllaGf 120
                  +d++ +s    ++ly+  k ++++  ++  ++   + +++Ws++++ ++   G  ++++++++++ ++++i+++++  +  ++ +s+  +++v + Gf
  EPX73202.1 394 SSDNQLASGGNDNALYVWdKFSDVPLYSF-HDHSAAVRALSWSTHQRGILASGGgTADQTIKIWNThRGSLIHDINTGsQVCSLQWSKLtNEIVSTHGF 491
                 55666667777777777722334444444.3455579***********99988768999******956*******9972557899*9861556667788 PP

                 TSSS-EEEEEETTTTEEEEEEE.-TT--E.EEE-TTSSEEEEEE- CS
       eIF2A 121 gnlaGeleiwdvkkkkkiakae.aanatl.vewspdgryvlTatt 163
                  +   e++iw+  k++ + +++ ++n +l +  spdg+ ++T   
  EPX73202.1 492 VEN--EIAIWNYPKVSRVGTLKgHTNRVLfLSMSPDGENIVTGAA 534
                 665..9*************998344444426899******99765 PP

>> ELYS-bb  beta-propeller of ELYS nucleoporin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   4.8e-05      0.22     222     254 ..     303     335 ..     294     353 .. 0.87
   2 ?   -2.0   0.0      0.22   9.9e+02     218     251 ..     468     503 ..     460     512 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 4.8e-05
     ELYS-bb 222 avsalsyisrtnqlavgfsdgylslwnlktlkk 254
                 +v++l++++r  +lavg  +g +++w+  + kk
  EPX73202.1 303 TVTSLKWVQRGTHLAVGTNNGLVEIWDAEACKK 335
                 79*************************999887 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.22
     ELYS-bb 218 psgvavsalsyisrtnqlav..gfsdgylslwnlkt 251
                  +g  v++l++ + tn+++   gf +  +++wn   
  EPX73202.1 468 NTGSQVCSLQWSKLTNEIVSthGFVENEIAIWNYPK 503
                 5799999*********99743499********9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (564 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       367  (0.0204696); expected 358.6 (0.02)
Passed bias filter:                      224  (0.0124937); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 4001.73
//
Query:       EPX73203.1  [L=503]
Description: kinesin-like protein Klp8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.5e-65  219.8   0.0    6.1e-65  219.3   0.0    1.2  1  Kinesin      Kinesin motor domain
    8.7e-19   67.9   0.0    5.7e-18   65.3   0.0    2.3  2  Microtub_bd  Microtubule binding
  ------ inclusion threshold ------
       0.08   13.4   0.1         23    5.6   0.0    3.0  2  PSD3         Protein of unknown function (DUF1587)


Domain annotation for each model (and alignments):
>> Kinesin  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  219.3   0.0     1e-68   6.1e-65       1     333 []      11     351 ..      11     351 .. 0.88

  Alignments for each domain:
  == domain 1  score: 219.3 bits;  conditional E-value: 1e-68
                 EE-SSSHHHHTTTTEBCEEEEC........TCTCEEEEEEEEECTTSCEEEEESEEEETTS-........HHHHHHHHHHHHHHHHHTTSEEEEEEEES CS
     Kinesin   1 RvRplnekekeeeeeeevevee........ekkeeekkskkenkeeeekkfkFdkvfdeeat........qeevyeetakplvesvleGynatifaYGq 83 
                 RvRp + +e ++++ +  + +e           e  ++s+++++ +  + f+Fdk+f ++a         +e++ +++   l++s leGyna++f+YG 
  EPX73203.1  11 RVRPKSLREISTNAVNLLTIDEnqneitinPPPEGLANSRHRHRVRGPRVFHFDKCFLPSAIgssgqaseEEDLIQNIGPYLIHSTLEGYNACLFTYGP 109
                 89999999999999998888877778877655667788999999999**********998877888888899999***9******************** PP

                 TTSSHHHHHTBCTTTSBSHHHHHHHHHHHHHHHCTTTHEEEEEEEEEEEEEETTEEEETTSTTTTSTSSEBEEEECTTSCCEEETTS--EEESSHHHHH CS
     Kinesin  84 tgsGKTyTmegkeeeeeGiipraleelFesikkekeekekefsvkvsylEiYneeiyDLLeskkskkkkklkiredskkgevyvkgltevevksaeevl 182
                  gsGKT+   g  +  +G+++r    lF++i++++ee++ +++v++s++Ei ne++yDLL+sk+   +++ +i+ d+ ++ ++ +g ++ ev++a+e+ 
  EPX73203.1 110 GGSGKTFATIGV-RGYSGLVYRLSCFLFKEIERTQEETNATVRVSISVVEILNETLYDLLKSKE---STENDIHADAPTH-YFSQGFSQFEVENAQEID 203
                 ***********8.999*********************************************994...44468****9987.****************** PP

                 HHHHHHHHHHTST.TSSCTSHHCCSEEEEEEEEEEEETTTTTC.EEEEEEEEEEEEEEECCCHHHHSSTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCC CS
     Kinesin 183 ellekgeknrkva.etklneeSSRSHavftitleqknlkeete.ekvkisklnLvDLAGsErasktgaaegerlkEaaniNkSLlaLgrvisaLaekkk 279
                  +l+ ++k ++   + ++ +     H+ +  +++qk  k++++ +++k s +++ DLA   r s+++  e+e   E a   +SL++L+rvi++L++kk+
  EPX73203.1 204 AFLRLAAKTKQATlADRFGK--THGHTAIIFKIHQKIPKTDKQvSSQKESYFEILDLASFSRNSHRKP-EDEITSEYAGEDNSLSVLNRVIASLTSKKH 299
                 ****9998776540444455..45666666666666555555545689***************99996.67779999999******************* PP

                 TSTSCGGGSHHHHHTGGGHSSSSEEEEEEEE-TBGGGHHHHHHHHHHHHHHCTT CS
     Kinesin 280 skhipYRdSkLTrlLqdsLgGnsktlmivtvspssenleetlstlkfaerakei 333
                 +  ipY dS LTr Lq++LgGn++t+m+++vsp+  +++et+stl++ae a++i
  EPX73203.1 300 DLTIPYNDSVLTRFLQNALGGNCRTIMLACVSPC--DFDETFSTLRYAEAARKI 351
                 *********************************9..89*************987 PP

>> Microtub_bd  Microtubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.3   0.0   9.6e-22   5.7e-18      20     149 .]       4     168 ..       2     168 .. 0.84
   2 ?   -0.6   0.1      0.19   1.2e+03     110     145 ..     388     420 ..     366     424 .. 0.73

  Alignments for each domain:
  == domain 1  score: 65.3 bits;  conditional E-value: 9.6e-22
                  TB-EEEEEEECCCS-T...........EEEETTT.......................TTTEEEE-SEEEECTT........HCCCCCCCCH.HHHHHH CS
  Microtub_bd  20 GniRvfarvrpelesek..........akikfpe....................eekkkkkefsFdrvfeses........eqeevfeeis.qlvqsa 78 
                   n+R+ +rvrp++ +e                 e                    +  +  + f+Fd++f +++        e+e+++++i  +l+ s 
   EPX73203.1   4 ANVRTIVRVRPKSLREIstnavnlltiD-----EnqneitinpppeglansrhrHRVRGPRVFHFDKCFLPSAigssgqasEEEDLIQNIGpYLIHST 96 
                  599**********998666665553330.....1345566667778888888876678899********9887777787889999****982568999 PP

                  HTT--EEEEEEES................ST-HCHHHHHHHHHHCCTS.CCCCEEEEEEEEEEESS-EEETT CS
  Microtub_bd  79 ldgynvcifaygqTGsGKtyTmegeeeeagmipraveeifetiselke.kgwkyeielqfveiynekvqDlL 149
                  l+gyn c+f+yg  GsGKt+   g +  +g + r+   +f++i++++e +++++++++++vei ne+++DlL
   EPX73203.1  97 LEGYNACLFTYGPGGSGKTFATIGVRGYSGLVYRLSCFLFKEIERTQEeTNATVRVSISVVEILNETLYDLL 168
                  9******************************************9987658899******************8 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.19
                  -HCHHHHHHHHHHCCTSCCCCEEEEEEEEEEESS-E CS
  Microtub_bd 110 ipraveeifetiselkekgwkyeielqfveiynekv 145
                  +++  ++++++i +l     +ye +++ +e++n  +
   EPX73203.1 388 HEEHSKKLLTIIDDL---RTEYESRIKSLELQNTAL 420
                  455566777777777...568888888888888765 PP

>> PSD3  Protein of unknown function (DUF1587)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.1    0.0084        50       9      56 ..     161     209 ..     158     217 .. 0.74
   2 ?    5.6   0.0    0.0038        23      29      60 ..     365     396 ..     343     399 .. 0.87

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.0084
        PSD3   9 enTvrDLlgvdldlaaslpaDpasegFdnnasalsvspll.leqYldaA 56 
                 ++T+ DLl+ + +  +++ aD+ ++ F++  s   v  ++ ++++l++A
  EPX73203.1 161 NETLYDLLKSKESTENDIHADAPTHYFSQGFSQFEVENAQeIDAFLRLA 209
                 78**********9********9999998755544454433255555555 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.0038
        PSD3  29 DpasegFdnnasalsvspllleqYldaAeeia 60 
                 D+  + Fdn+ s+l  + +++ ++ +  ++++
  EPX73203.1 365 DSDESEFDNIVSSLESDRVQMRRHEEHSKKLL 396
                 778899****************9988777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (503 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       884  (0.0493056); expected 358.6 (0.02)
Passed bias filter:                      578  (0.0322383); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.69u 0.34s 00:00:01.03 Elapsed: 00:00:00.56
# Mc/sec: 2718.07
//
Query:       EPX73204.1  [L=695]
Description: transport complex subunit Cog1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.1e-11   42.8   3.5    4.1e-11   42.8   3.5    3.7  3  Vps51          Vps51/Vps67
  ------ inclusion threshold ------
        2.8    7.8   6.6        4.5    7.1   0.1    3.3  3  Mt_ATP-synt_D  ATP synthase D chain, mitochondrial (ATP5H)
        3.3    8.1   6.9        2.4    8.5   0.9    3.4  3  DUF2935        Domain of unknown function (DUF2935)
        3.8    8.1   6.2         49    4.6   0.1    3.7  3  YtxH           YtxH-like protein


Domain annotation for each model (and alignments):
>> Vps51  Vps51/Vps67
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.8   3.5   9.2e-15   4.1e-11       5      83 ..      11      85 ..       7      89 .. 0.92
   2 ?   -1.4   0.2      0.57   2.6e+03      15      60 ..     178     224 ..     168     225 .. 0.54
   3 ?    0.1   0.1       0.2   8.8e+02      50      68 ..     426     444 ..     423     490 .. 0.67

  Alignments for each domain:
  == domain 1  score: 42.8 bits;  conditional E-value: 9.2e-15
       Vps51  5 dfdaeayvrellakstlkellkveasllseiraldselkalVydnYskLisasdtIrkmksemdkldqklselkqaisk 83
                  d+++ +r    ++++++++++e+ ++++ +++ +el++ V+ nY+ +++a+d I++++s++  + +++++l++  s+
  EPX73204.1 11 TTDWKEVFR----THSISQTIQLEKFVQQQVEEKGRELQQSVCLNYQSFLKAADNISQIQSSLLAVVENIHQLQSQTSE 85
                679999999....**************************************************9999999999987665 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.57
       Vps51  15 llakstlkellkveasllseir.aldselkalVydnYskLisasdtI 60 
                  l+k++lk  +k+ asl+  ++ +l+ +l+a    + + L+s +dt+
  EPX73204.1 178 QLSKEDLKNQDKIMASLTLLKHmTLEDSLRAFLDVRFTTLMSMTDTL 224
                 34445555555555555533332566667776666667777777665 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.2
       Vps51  50 YskLisasdtIrkmksemd 68 
                 Y++L+s  d ++++++ ++
  EPX73204.1 426 YQELLSFKDRVKRIRGFLE 444
                 7777777777777776553 PP

>> Mt_ATP-synt_D  ATP synthase D chain, mitochondrial (ATP5H)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.6      0.54   2.4e+03      85     135 ..      34      88 ..      15     100 .. 0.58
   2 ?    2.5   0.1     0.025   1.1e+02      97     138 ..     167     209 ..     147     215 .. 0.66
   3 ?    7.1   0.1     0.001       4.5      55     117 ..     432     494 ..     430     501 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.54
                    TTHHHHHHHHHHHHCHHHHH...HHHHHHHHHHHH.HHHHT-XXXXXXXXXXXXX CS
  Mt_ATP-synt_D  85 teevdaeekevkkeikefke...eskkrieeleke.leklksllpfeemtmedfa 135
                    +++v+++  e ++++    +   +++++i+++++  l+ ++++  ++  t e+ a
     EPX73204.1  34 QQQVEEKGRELQQSVCLNYQsflKAADNISQIQSSlLAVVENIHQLQSQTSEQKA 88 
                    4666666666666654333323344555655555413555566666655555544 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.025
                    HHCHHHHHHHHHHHHH.HHHHHHHHT-XXXXXXXXXXXXXXXX CS
  Mt_ATP-synt_D  97 keikefkeeskkriee.lekeleklksllpfeemtmedfaeaf 138
                    +  + + e+ ++  +e l+++ + ++sl  +++mt+ed   af
     EPX73204.1 167 ACTHYYEEQLNQLSKEdLKNQDKIMASLTLLKHMTLEDSLRAF 209
                    4445555555554443155556667888889999999987776 PP

  == domain 3  score: 7.1 bits;  conditional E-value: 0.001
                    HHHHSSST.THHHHHHHHHHH--------TTTTHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH CS
  Mt_ATP-synt_D  55 Ykknvake.glVdeFekkYealkipypedkyteevdaeekevkkeikefkeeskkrieelekel 117
                    +k++v+   g  + F ++Ye+   p+ + + +++v+++ +e  +ei +   ++ ++i++ e++ 
     EPX73204.1 432 FKDRVKRIrGFLETF-DSYENTPLPFNTGSLKQSVNEKLNEFSEEILQKLDKASEEITSSESTE 494
                    577776666999999.56****************************999999999999887765 PP

>> DUF2935  Domain of unknown function (DUF2935)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.9   0.00053       2.4       3     113 ..      26     203 ..      24     206 .. 0.90
   2 ?   -1.8   0.0      0.86   3.8e+03      67      99 ..     347     377 ..     303     388 .. 0.63
   3 ?    0.3   0.1      0.19   8.3e+02      64      81 ..     465     479 ..     409     509 .. 0.42

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00053
     DUF2935   3 sleehlFWlrimkeHalfiealldpkekdlikeakefkkeFekllaeavelseglv........................................... 58 
                  +++++F +++++e  +++++++  + + ++k a+++ +  + lla ++++ +                                              
  EPX73204.1  26 TIQLEKFVQQQVEEKGRELQQSVCLNYQSFLKAADNISQIQSSLLAVVENIHQLQSqtseqkaekaadvfskfsslrlsgnengfksfvkrfcytalpy 124
                 678999999999999999*99999999**********99999999988887766668889999999999999999999999999999************ PP

     DUF2935  59 ........................rasseleeavakLneealkltreliqFkkellekvlscklfsiiypllidHilrE 113
                                         +   ++ ++++++ ++  ++t  + + +++l ++ l+++ + +   +l++H++ E
  EPX73204.1 125 tfqllnneeyllsirlflftrvlfQRLHKDDRDLKEFVHKYDACTHYYEEQLNQLSKEDLKNQDKIMASLTLLKHMTLE 203
                 ********************9998666889999******************************************9877 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.86
     DUF2935  67 avakLneealkltreliqFkkellekvlscklf 99 
                 ++++L +    l   +i+ ++e+ e++++ +l+
  EPX73204.1 347 DLQDLWNSL--LYPHFINALQEIVENIKQHRLK 377
                 444444433..2345677777777777766554 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 0.19
     DUF2935  64 leeavakLneealkltre 81 
                  +e   kLne + + +++
  EPX73204.1 465 VNE---KLNEFSEEILQK 479
                 222...222222222222 PP

>> YtxH  YtxH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.7     0.013        58      21      72 ..      39      92 ..       2     100 .. 0.79
   2 ?   -2.2   0.0       1.4   6.3e+03      37      59 ..     326     348 ..     311     356 .. 0.49
   3 ?    4.6   0.1     0.011        49      52      73 ..     460     486 ..     415     506 .. 0.68

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.013
        YtxH 21 ksGketRkdlkekaddlkekakelleeakeka...kekaedlkekvkekadelke 72
                ++G+e+++ +  +++ + + a+++  ++++     +e++ +l+++ +e+  e ++
  EPX73204.1 39 EKGRELQQSVCLNYQSFLKAADNI-SQIQSSLlavVENIHQLQSQTSEQKAEKAA 92
                588888888888888887666444.455555578888899999988888544443 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1.4
        YtxH  37 lkekakelleeakeka........kekaedl 59 
                 l ek+ke                 ++++edl
  EPX73204.1 326 L-EKVKEK-------YgalsninaTSQSEDL 348
                 3.333333.......2222222234444444 PP

  == domain 3  score: 4.6 bits;  conditional E-value: 0.011
        YtxH  52 a.....kekaedlkekvkekadelkek 73 
                 +     +ek ++++e++ +k d+++e+
  EPX73204.1 460 SlkqsvNEKLNEFSEEILQKLDKASEE 486
                 033333666666666666666665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (695 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1292  (0.072062); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.73u 0.27s 00:00:01.00 Elapsed: 00:00:00.47
# Mc/sec: 4416.57
//
Query:       EPX73205.1  [L=179]
Description: sister chromatid cohesion protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.7e-11   42.7   0.0    8.4e-11   41.9   0.0    1.4  1  FeS_assembly_P  Iron-sulfur cluster assembly protein
  ------ inclusion threshold ------
       0.26   11.0   3.0       0.12   12.1   0.3    1.7  2  Lebercilin      Ciliary protein causing Leber congenital amau


Domain annotation for each model (and alignments):
>> FeS_assembly_P  Iron-sulfur cluster assembly protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.9   0.0   9.4e-15   8.4e-11       2      74 .]      57     137 ..      56     137 .. 0.93

  Alignments for each domain:
  == domain 1  score: 41.9 bits;  conditional E-value: 9.4e-15
                     HHHHHHHTT-B-TTTSSBCCCCT---E..EEE-T.....-EEEEEE--SSTT-TTHHHHHHHHHHHHC..STT--EEEEEE CS
  FeS_assembly_P   2 eavlaaLrtVtDPelgvdlvslglvre..idieg.....gkVsvditltypacslaeairadaeaalr.alpgvevveVev 74 
                     +++++ L++++DPe++++l +l +v+   id+++     + V v it+t+p+cs+ ++i   ++  l+  lp+++ v V+v
      EPX73205.1  57 QEIFDLLAKINDPEHPLTLAQLSVVKLedIDVQDnahgnSFVVVYITPTIPHCSMCTLIGLCIRVRLErCLPPRFHVDVKV 137
                     89********************9997444*****9998778***************************9*****9999987 PP

>> Lebercilin  Ciliary protein causing Leber congenital amaurosis disease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.3   1.3e-05      0.12      58     143 ..       1      83 [.       1      92 [. 0.88
   2 ?   -1.4   0.2      0.17   1.5e+03     110     121 ..     146     157 ..     135     172 .. 0.55

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 1.3e-05
  Lebercilin  58 LpqllarhneEvrvlrerlRksqekerelekklkekeaellrlkdklkklkkLsedknLaereeLqkkLeeleakleekeekikeL 143
                 ++  l++ n Ev++l +   ++qe+e+     lk  e+ l+ ++d+l+ l+k+ +  + +e  +L  k+++ e+ l  ++  + +L
  EPX73205.1   1 MSAALQNENPEVKALSQLPSRAQEEENL---FLKGNEEWLWDTSDELESLEKVRDGVDAQEIFDLLAKINDPEHPLTLAQLSVVKL 83 
                 78889****************9998865...599*******************************999999888777666666655 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.17
  Lebercilin 110 LsedknLaeree 121
                 L  +k+L+++e+
  EPX73205.1 146 LQVNKQLNDKER 157
                 333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       539  (0.030063); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.29s 00:00:00.75 Elapsed: 00:00:00.48
# Mc/sec: 1121.01
//
Query:       EPX73206.1  [L=474]
Description: 6-phosphofructo-2-kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.6e-53  179.3   2.6    9.5e-53  178.8   2.6    1.2  1  6PF2K       6-phosphofructo-2-kinase
    3.8e-06   26.6   0.2    8.4e-06   25.4   0.2    1.5  1  KTI12       Chromatin associated protein KTI12
    1.3e-05   25.0   0.0    2.2e-05   24.2   0.0    1.3  1  His_Phos_1  Histidine phosphatase superfamily (branch 1)
    0.00096   19.3   0.0     0.0024   18.0   0.0    1.7  1  AAA_33      AAA domain
     0.0021   16.8   0.9     0.0032   16.2   0.9    1.2  1  DUF1887     Domain of unknown function (DUF1887)


Domain annotation for each model (and alignments):
>> 6PF2K  6-phosphofructo-2-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.8   2.6   2.6e-56   9.5e-53       7     222 ..      45     259 ..      39     260 .. 0.92

  Alignments for each domain:
  == domain 1  score: 178.8 bits;  conditional E-value: 2.6e-56
                 HHT..S-EEEEEESSTTSSHHHHHHHHHHHHHHTT--EEEEEHHHHHHHHHSS---GGGGSTT-HHHHH.HHHHHHHHHHHHHHHHHHTS--SEEEEES CS
       6PF2K   7 tnlknsklvivlvGLpargKtyiskkltrylkwlgvrtkvFnvgkyrreaskalsdaeffrpdneealk.lreklalaalkdllaylneeegqvaifDA 104
                   +++ klvi++ GLpargK+ i++ + rylkwlg++++ + ++ky  e sk+ +++   r + +  lk  r+++    l+dl ++l++e+gqvai+DA
  EPX73206.1  45 MLFHAGKLVIIMSGLPARGKSNIAVSIDRYLKWLGFNCRFYSLAKYMDERSKEFENSGNTRESIDAFLKlYRDNTIELCLRDLENFLSREKGQVAIYDA 143
                 567899**********************************************97777666655544444269999999********************* PP

                 ---SHHHHHHHHHHHHHTT-EEEEEEEE--HHHHHHHHHHHHTTTSGGGTTS-HHHHHHHHHHHHHHHHTT-----TTTTTTSEEEEEETTTTEEEEE- CS
       6PF2K 105 tNttrerRklilefveennlkvlflesicsdeeiikeNikevklsspDYkdketeeaikdflkRlenyekqyeplddeedeelsyIkvidvgkslvvnn 203
                 tN t+e Rk + ++++++++++lf+es+c+ e++i+ Ni+e+ + s+ ++  +++ea +++ +R+   + qyep+d   ++e sy+k+i+  + l+ n+
  EPX73206.1 144 TNGTKETRKALYDRFKSFSFNILFIESLCDKENVIHDNIQEAIQVSKEFEHWDKKEAEAEYCRRIDLLKMQYEPID---EKEYSYVKMINFSETLITNR 239
                 ****************************************************************************...899********999999988 PP

                 -.-SHHHHHHHHHHTT---S CS
       6PF2K 204 v.qgylqsrivyyllNihlk 222
                   qgyl sri + l+Ni l+
  EPX73206.1 240 TnQGYLLSRILFLLMNITLT 259
                 7479************9875 PP

>> KTI12  Chromatin associated protein KTI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.2   2.3e-09   8.4e-06       4     125 ..      54     195 ..      52     224 .. 0.69

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 2.3e-09
                 EEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH.TTSS.S--GGGH........HHHHHHHHHHHHHHHT......T.SEEEE-S---SHHHHH CS
       KTI12   4 vvltGlPssGKstrakeLakaleeekrsvvviddeslgiekds.ykdsake........kalRsslrsavkrdLs......kekvVIvDslnyikgfRY 87 
                 ++++GlP+ GKs +a  + ++l+  + ++   + +++  e+++ +++s +         k  R+++++   rdL+      k +v I D++n +k  R 
  EPX73206.1  54 IIMSGLPARGKSNIAVSIDRYLKWLGFNCRFYSLAKYMDERSKeFENSGNTresidaflKLYRDNTIELCLRDLEnflsreKGQVAIYDATNGTKETRK 152
                 899*********************999998888887774433336666554112222225579999988888875233232578*************** PP

                 HHHHHHHHTT-EEEEEEEE--HHHHHHHHHHTT-S.......S CS
       KTI12  88 eLyciakaakttlcvvyvvapldvlvkwneereekee.....y 125
                  Ly   k+ + +   +  +++++++++ n +++ + +     +
  EPX73206.1 153 ALYDRFKSFSFNILFIESLCDKENVIHDNIQEAIQVSkefehW 195
                 *********************8888887733332222223332 PP

>> His_Phos_1  Histidine phosphatase superfamily (branch 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.0   6.2e-09   2.2e-05      84     176 ..     341     432 ..     317     447 .. 0.87

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 6.2e-09
                 GGTT-B.HHHHHH...HSHHHHHHHHH-GGG-BS-BHHHHHHHHHHHHHHHHHHTTTSEEEEEE-HHHHHHHHHHHHT--GGGGGGB---TT-E CS
  His_Phos_1  84 dweglttaeiaeey.peeleawlrdpadvrppggEsledvaaRvaaaleelaarhegetvlvVsHggvirallarllglpleelrrleldnasl 176
                 dw g +++++++++ ++e++ + rdp++ r ++ Es+ d+a R+++ + e+a++ ++  v++V  + ++r+l+ +++++p  +++ l+l ++++
  EPX73206.1 341 DWFGNNFEKLRSTFgKDEYNLFMRDPYRCRVKERESFYDLAVRLEPLILEIARESRD--VVIVGSKSLVRVLYGYYMNVPAGDIPFLPLLPTGI 432
                 56666666666666246899999********************************97..*********************99998877766665 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   6.7e-07    0.0024       1     117 [.      53     183 ..      53     203 .. 0.63

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 6.7e-07
      AAA_33   1 lvllvGlpGsGKstlaerl...lkklg....avllssdt...lrrrlfg...tdqqskt.....dytrvldrlyqilnelarkalsagrnvildatnls 81 
                 ++++ Glp+ GKs  a ++   lk lg    +   s  +   +r++ f+   + ++s+      ++ +  + + + l++++   +++g+ +i datn +
  EPX73206.1  53 VIIMSGLPARGKSNIAVSIdryLKWLGfncrF--YSLAKymdERSKEFEnsgNTRESIDaflklYRDNTIELCLRDLENFLS--REKGQVAIYDATNGT 147
                 89***********9986552228778898552..444441114444444344334444454443333333444444444442..344444888****** PP

      AAA_33  82 rrerarflklarrlgvpvrivvvetdeetlkeRlak 117
                 +++r+++   ++ ++++++ +   +d e   + + +
  EPX73206.1 148 KETRKALYDRFKSFSFNILFIESLCDKENVIHDNIQ 183
                 ************999999988888887766655554 PP

>> DUF1887  Domain of unknown function (DUF1887)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.9   8.8e-07    0.0032      57     192 ..     110     249 ..      87     270 .. 0.83

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 8.8e-07
     DUF1887  57 eifeledevdleeleeslkglleelkaaeevvlNvtgGtklmalgayevfRskhkrIfyvetasdkleflspeGkedievkdris...vsdylagy..g 150
                  +++l  +  +e   + l + l + k  +  +  +t Gtk    + y+ f+s    I+++e+  dk  +++ + +e i+v+++ +    ++  a y  +
  EPX73206.1 110 AFLKLYRDNTIELCLRDLENFLSREK-GQVAIYDATNGTKETRKALYDRFKSFSFNILFIESLCDKENVIHDNIQEAIQVSKEFEhwdKKEAEAEYcrR 207
                 56777777778888888999999999.888899***********************************************9998866645555666448 PP

     DUF1887 151 advlraefsdkqkdeeadkrlkelaerlAsrakelgdilatL 192
                 +d l+ ++   +++e    ++ +++e l ++  + g +l+ +
  EPX73206.1 208 IDLLKMQYEPIDEKEYSYVKMINFSETLITNRTNQGYLLSRI 249
                 9999******************************99999864 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (474 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       630  (0.0351386); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 3240.72
//
Query:       EPX73207.1  [L=346]
Description: GDP-mannose transporter Vrg4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.7e-06   26.8  30.2    0.00011   22.4   9.3    2.1  2  EamA      EamA-like transporter family


Domain annotation for each model (and alignments):
>> EamA  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5  12.9   2.8e-05       0.5      10     135 ..      19     147 ..      12     149 .. 0.83
   2 !   22.4   9.3   5.9e-09   0.00011       2     131 ..     165     304 ..     164     310 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 2.8e-05
        EamA  10 aalfwaiyfvlskillrkvspltltfvrfliagillliiallkegkl....aklslkdwllllllgllgtvlafllffyalkktsasnaslitslePvf 104
                 + ++ +i  +++ + + + + + ++f+ +++ ++l+++++ + ++ +    + ++l++ +l + ++ +  vl+ +   +al+++s+ + +++ +l+ ++
  EPX73207.1  19 SYCMASILMTMTNKYVLSSPGYNMNFLLLTVQSLLCVLTIRVLKNLKlisyRDFDLREAKLWFPIS-FMLVLMIYTSSKALQYLSVPVYTIFKNLTIIV 116
                 455666667777777888888899998888888888666555555554777889999998888888.78889999************************ PP

        EamA 105 tlilsvlllgekltlkqllgivlillGvlli 135
                 ++   vl++g +++ ++l++++l++l+ ++ 
  EPX73207.1 117 IAYGEVLWFGGHVSALTLFSFGLMVLSSIVA 147
                 **************************98875 PP

  == domain 2  score: 22.4 bits;  conditional E-value: 5.9e-09
        EamA   2 lgillallaalfwaiyfvlskil..lrkvspltltfvrfliagillliiallkegkl.....aklslkd....wllllllgllgtvlafllffyalkkt 89 
                 +g+++++  +++ a+  +++++   l+++  + + f+  l++  +l++ +l++e +      +++++      + ++l+ g+ ++v   +   + ++ t
  EPX73207.1 165 SGYFWMFMNCITNAAFVLTMRKRikLTNFRDFDTMFYNNLLSIPILIVCTLFTEDWSatniaQNFPPDTkynvIVAMLISGV-SSVGISYTSAWCVRVT 262
                 79**********99999999555479999999**************999999999998777744444335663666666665.555555799******* PP

        EamA  90 sasnaslitslePvftlilsvlllgekltlkqllgivlillG 131
                 s+++ s++ +l  +  +i + l+++ ++t+ ++ +i+l++++
  EPX73207.1 263 SSTTYSMVGALNKLPLAIAGLLFFNAPVTFGSVSAILLGFIS 304
                 ***************************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (346 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       743  (0.0414412); expected 358.6 (0.02)
Passed bias filter:                      290  (0.0161749); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 2339.92
//
Query:       EPX73208.1  [L=433]
Description: translation release factor eRF1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.8e-47  161.0   0.1    2.8e-47  160.3   0.1    1.3  1  eRF1_2          eRF1 domain 2
    2.9e-38  130.8   0.9      6e-38  129.8   0.9    1.6  1  eRF1_3          eRF1 domain 3
    1.3e-19   70.5   0.0    2.3e-19   69.7   0.0    1.4  1  eRF1_1          eRF1 domain 1
    1.4e-10   41.5   0.5    2.3e-10   40.9   0.5    1.3  1  acVLRF1         Actinobacteria/chloroflexi VLRF1 release fact
    2.1e-10   41.0   0.4    3.7e-10   40.2   0.4    1.4  1  baeRF_family10  Bacterial archaeo-eukaryotic release factor f
  ------ inclusion threshold ------
       0.19   11.5   0.4         10    5.9   0.0    3.0  3  VanY            D-alanyl-D-alanine carboxypeptidase


Domain annotation for each model (and alignments):
>> eRF1_2  eRF1 domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  160.3   0.1   9.5e-51   2.8e-47       2     132 ..     143     273 ..     142     274 .. 0.99

  Alignments for each domain:
  == domain 1  score: 160.3 bits;  conditional E-value: 9.5e-51
                 EEEEEEETTEEEEEEEESSCEEEEEEEE------BSTTBSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHTTTESEEEEEESSTHHHHHHHHHHHHH CS
      eRF1_2   2 vglivldegeAtigllkgsrtevlkkievsvPkKhkrGgqsarrfeRlreekleeflkkvaeaankafllvdkdklkgiilagpgfvkeefldkdllda 100
                 +g+iv+d++++ +g+++gs +evl+k++v++PkKh+rGgqsa rf+Rlreek++++++kvae+a ++f++ dk +++g+ilag++++k+e+ ++dl+d+
  EPX73208.1 143 FGFIVMDGHQTLYGMVSGSAREVLQKFTVDLPKKHGRGGQSALRFARLREEKRHNYVRKVAENAVQHFITEDKANVAGLILAGSADFKTELGQSDLFDQ 241
                 8************************************************************************************************** PP

                 HHHTCCEEEEE-S-TSCHHHHHHHHCCHHHHC CS
      eRF1_2 101 elkkkviklvdvsyggesglnevlekaaevlk 132
                 +l++k+i +vdvsygge+g+n+++e +a++l+
  EPX73208.1 242 RLQSKIIRTVDVSYGGEAGFNQAIELSADTLA 273
                 ***************************99997 PP

>> eRF1_3  eRF1 domain 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.8   0.9     2e-41     6e-38       1     113 []     277     416 ..     277     416 .. 0.99

  Alignments for each domain:
  == domain 1  score: 129.8 bits;  conditional E-value: 2e-41
                 HHHHHHHHHHHHHHHHCTCSSEEESHHHHHHHHHTT-EEEEEEEHCHHTSSSHHHHHS........................-HHH-HHHHHH...HHH CS
      eRF1_3   1 liqekklleefleelakdtgkavYGveevlkalemgAvetLLvseelersrdtlkekv........................ketgeelelve...lie 72 
                 ++qekk++++f++e++ dtgk+++Gv ++++al+ gAve LL++ +l+++r++ ++++                        ketg+e+elv+   l e
  EPX73208.1 277 FVQEKKIIQKFFDEISLDTGKYCFGVVDTMNALQEGAVEMLLIYADLDMTRYEFRNSEgntvvnymtkeqeegdktnsylldKETGAEMELVNtmaLSE 375
                 68******************************************************99*************************************9*** PP

                 HHHHHHHHTT-EEEEE-TTSHHHHHHHHHTTTEEEEESS-- CS
      eRF1_3  73 elvenveesgakveiisseseeGeqlvkafgGiaaiLRykv 113
                 +l+e+++++ga++e++s++s+eG+q+vk+fgGi+ai+Ry++
  EPX73208.1 376 WLAEHYKDYGANLEFVSDRSQEGMQFVKGFGGIGAIMRYQL 416
                 ***************************************85 PP

>> eRF1_1  eRF1 domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.7   0.0   7.7e-23   2.3e-19       2     128 ..      16     136 ..      15     137 .. 0.97

  Alignments for each domain:
  == domain 1  score: 69.7 bits;  conditional E-value: 7.7e-23
                 EEEEE..CTBTTSCCEEEEEE-SCHHHHHHHHHCHTTHEEEEEEEECHHH.......--CEEEEEEEEEEEEEEECTT...SSEEEEEEEEEEGGGG-- CS
      eRF1_1   2 kllkr..dlekdgsgsvtLipeddedlwhlynliapgdsvrastvrkvqresstgsreservklkLtikvekvdfdkd...agvlrisGkvieenehvk 95 
                 +l+k+  + +++g++++tLi+++ e+++ ++ ++a++++++++++++v+r          +v++++t++ e+++++++   +g++ ++G+v++e +   
  EPX73208.1  16 RLVKQlvNCHGNGTSMITLIIPPREQISRISSMLAEEYGTASNIKSRVNR---------LSVLSAITSTRERLKLYNKvppNGLVIYCGEVMMEGN--- 102
                 8899988999**************************************99.........9******************9****************9... PP

                 TTSEEEEEE-TTSEEEEEECE.ESHHHHHHHHHH CS
      eRF1_1  96 lgafhtldlelkrpftiikee.wdsfalerLkea 128
                 ++++ ++d+e+++p++++ +  +++f++e+L e+
  EPX73208.1 103 KTRKLNIDFEPFKPINTSQYLcDNKFHTEALAEL 136
                 9********************9*********996 PP

>> acVLRF1  Actinobacteria/chloroflexi VLRF1 release factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.9   0.5   7.6e-14   2.3e-10       5      92 ..     145     236 ..     141     266 .. 0.84

  Alignments for each domain:
  == domain 1  score: 40.9 bits;  conditional E-value: 7.6e-14
     acVLRF1   5 vllvrrggfavgvveggelvaskvgtrdvqgrtaaGGwSqqRfaRrrenqadalleavaeaaarllaeesae....vvlgGdrslvaevled 92 
                 +++        g+v+g++++  +++t d  +++ +GG+S  RfaR re++  + +++vae a +++  e+++    ++l+G      e+ ++
  EPX73208.1 145 FIVMDGHQTLYGMVSGSAREVLQKFTVDLPKKHGRGGQSALRFARLREEKRHNYVRKVAENAVQHFITEDKAnvagLILAGSADFKTELGQS 236
                 555555556689******************************************************6666666788*****98887777665 PP

>> baeRF_family10  Bacterial archaeo-eukaryotic release factor family 10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.2   0.4   1.2e-13   3.7e-10       3     123 ..     130     254 ..     129     271 .. 0.88

  Alignments for each domain:
  == domain 1  score: 40.2 bits;  conditional E-value: 1.2e-13
  baeRF_family10   3 lapLlealdeyerygvvlvdreraRlfevylgeleeveevegevpgrtktggwksqdrfqrreeeqaerhlkevAellaklleerg...verlvl 94 
                     ++ L+e+l+ ++r+g +++d ++  +  v++   e  ++++ + p+++ +gg+ s  rf+r +ee+++ ++++vAe +++ + +++   v  l+l
      EPX73208.1 130 TEALAELLETDQRFGFIVMDGHQTLYGMVSGSAREVLQKFTVDLPKKHGRGGQ-SALRFARLREEKRHNYVRKVAENAVQHFITEDkanVAGLIL 223
                     678*********************999999999999*****************.**********************9887765444478****** PP

  baeRF_family10  95 gGdeeetaal..ldrlpkalrarvvgtlplp 123
                     +G ++ + +l   d++ ++l+++++ t++++
      EPX73208.1 224 AGSADFKTELgqSDLFDQRLQSKIIRTVDVS 254
                     ***9988888445899********9997665 PP

>> VanY  D-alanyl-D-alanine carboxypeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.14   4.2e+02      81     109 ..     119     147 ..     106     156 .. 0.76
   2 ?    0.6   0.0      0.15   4.5e+02       2      51 ..     197     247 ..     196     274 .. 0.72
   3 ?    5.9   0.0    0.0034        10      89     118 ..     368     397 ..     347     401 .. 0.82

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.14
                 TT.--SCGGGHCHHHHHHHHHGGGGTEEE CS
        VanY  81 eetkleesfeetkafkwlqknaakygFvl 109
                 +++ l ++  +t+a ++l +  +++gF++
  EPX73208.1 119 TSQYLCDNKFHTEALAELLETDQRFGFIV 147
                 336678888889999999999******97 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.15
                 GEEEHHHHHHHHHHHHH..HHHTT--EEEEE----HHHHHHHH.HHHHHHHH CS
        VanY   2 iklrkeaaealeellaa..akkegielalvsgfRsverQeelfekksvkeek 51 
                 +++rk a +a+++++ +  a+ +g+ la    f +   Q  lf +++ +++ 
  EPX73208.1 197 NYVRKVAENAVQHFITEdkANVAGLILAGSADFKTELGQSDLF-DQRLQSKI 247
                 57899999999999865116667888888888999999****9.55555433 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.0034
                 GGHCHHHHHHHHHGGGGTEEESS-TTGHHH CS
        VanY  89 feetkafkwlqknaakygFvlrypkgkeqe 118
                 +++ ++ +wl+++ ++yg  l + ++++qe
  EPX73208.1 368 VNTMALSEWLAEHYKDYGANLEFVSDRSQE 397
                 5677899****************9988874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (433 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       473  (0.0263818); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 2990.22
//
Query:       EPX73209.1  [L=1572]
Description: pentafunctional aromatic polypeptide Aro1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   5.1e-127  424.0   0.0   7.3e-127  423.5   0.0    1.2  1  EPSP_synthase    EPSP synthase (3-phosphoshikimate 1-carboxyv
    2.5e-97  325.1   0.0    3.9e-97  324.5   0.0    1.3  1  DHQ_synthase     3-dehydroquinate synthase
      2e-56  191.8   0.0    4.4e-56  190.7   0.0    1.6  1  DHquinase_I      Type I 3-dehydroquinase
    4.8e-35  121.0   0.0    4.1e-34  118.0   0.0    2.3  2  SKI              Shikimate kinase
    4.8e-25   87.6   0.0    1.3e-24   86.3   0.0    1.8  1  Shikimate_dh_N   Shikimate dehydrogenase substrate binding do
    5.5e-09   36.1   0.0    2.9e-08   33.7   0.0    2.2  2  Fe-ADH_2         Iron-containing alcohol dehydrogenase
    2.2e-07   30.5   0.0    4.4e-07   29.6   0.0    1.5  1  SDH_C            Shikimate 5'-dehydrogenase C-terminal domain
    1.7e-05   24.9   0.0      5e-05   23.4   0.0    1.8  1  Shikimate_DH     Shikimate / quinate 5-dehydrogenase
    0.00019   22.0   0.0     0.0011   19.5   0.0    2.3  2  AAA_18           AAA domain
  ------ inclusion threshold ------
      0.012   16.1   0.0      0.069   13.6   0.0    2.4  3  AAA              ATPase family associated with various cellul
      0.018   15.3   0.0       0.27   11.5   0.0    3.0  3  Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding doma
      0.022   14.8   0.5      0.088   12.9   0.0    2.3  3  AAA_14           AAA domain
      0.044   13.1   0.0       0.11   11.9   0.0    1.6  1  ThiF             ThiF family
      0.045   13.9   0.0       0.13   12.4   0.0    1.8  1  AAA_33           AAA domain
      0.053   13.9   0.0        1.7    9.0   0.0    2.9  3  AAA_16           AAA ATPase domain
       0.13   12.8   0.0       0.38   11.3   0.0    1.8  1  ABC_tran         ABC transporter


Domain annotation for each model (and alignments):
>> EPSP_synthase  EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  423.5   0.0  6.5e-130  7.3e-127       6     417 .]     404     837 ..     401     837 .. 0.95

  Alignments for each domain:
  == domain 1  score: 423.5 bits;  conditional E-value: 6.5e-130
                    --EEEEE--B-HHHHHHHHHHHGGGBSSEEEES---SHHHHHHHHHHHHTT.EEEEEECTSEEEEEGTT..--EE-HHHHTT-GGGGGGHHHHHHH CS
  EPSP_synthase   6 rlegevkvpGsksisnralllAaLaegestitnlLdseDvrsmlealreLgaeiikldeekevviveglggsfeapeelvldlgnsgtalrlLtal 101
                     l+  +++pGsksisnral+lAaL++g++++tn+L+s+D++ m+ al +Lga++ ++++++e+++veg+gg+++ap ++ l+lgn+gta r+Lt++
     EPX73209.1 404 SLDVVITPPGSKSISNRALVLAALSQGTCRLTNMLHSDDTQFMMSALESLGAAKFSWEDNGETLVVEGSGGKMSAP-KDALYLGNAGTAARFLTGV 498
                    567789**********************************************************************.8****************** PP

                    HSEES.....SEEEEE-SBTTCGS--HHHHHHHHHTT-EEEEETTEEEEEESEET...SS-BEEEEETSSTTHHHHHHHHHHHTTSBS..EEEEES CS
  EPSP_synthase 102 lalas.....gevvLtGdesirkRPidrlldaLrqlGaeieveegenkaplkvkg...lklkgveikaevsSqqvtsllllaallaeg..ttelee 187
                     al++       vvLtG+ +++ RPi +l+daLr++G ++e++e+e+++pl  ++   lk++ +e++a+vsSq+v+s+l++a+ +a +  t++l++
     EPX73209.1 499 SALVPtqdkeHGVVLTGNHRMKVRPIGPLVDALRNNGCTVEYLEKEGSLPLSTSSstgLKGGVIELAATVSSQYVSSILMCAP-YASEpvTLKLVG 593
                    **9887888889****************************************998999*************************.555559999999 PP

                    ..-TTHHHHHHHHHHHHHTT-EEEETTSSEEEEEE--SS..B--EEEE--B-HHHHHHHHHHHHHTT-EEEEES--GGGGHHH..HHHHHHHHTTE CS
  EPSP_synthase 188 ..lasepsiddtlkmlkkfgikietsgteesitvkGkek..lpgteyvvegDassAayflvaAaitggevtvenvginslqGdiealdeilekmga 279
                      ++s+++id+t+ m+ +fgi +e+s++ee+++  + +k  +p+ +y++e+DassA+y+l+ Aaitg++ tv n+g  slqGd ++++++l+ mg+
     EPX73209.1 594 gkPISQLYIDMTIAMMASFGIIVEKSSSEENTYHIPRAKyqSPS-KYEIESDASSATYPLAIAAITGTKCTVPNIGSASLQGDSRFARDVLKPMGC 688
                    9**************************************96666.*************************************************** PP

                    EEEEESTSEEEEEET...TS--BEEEEEBGSTTSBHGGGHHHHHH.....HHHTSBSEEEEEGSSSTTCCHHHHHHHTTT-EEEEETTEEEEEEEE CS
  EPSP_synthase 280 eitqeedasivvgps...glklkdvdietlpdeaptlavlaafae.....gttviegiaelrvketdrlaamateLrklGaeveeeedgliiipae 367
                     ++q++++++v+gp+    + l+++d+et++d+++t+ v+aa+++       t+i+gia++rvke++r+aam+ eL+k+G+ + e+edg+ i + +
     EPX73209.1 689 LVEQTANSTTVQGPPkgqLKPLESIDMETMTDAFLTASVVAAVSSnaegdPITRITGIANQRVKECNRIAAMVHELAKFGVRAGELEDGIYIFGQD 784
                    ******9999999999988889999******************9977766679*************************************988877 PP

                    E....EB-EEEE-TTSTTTTHHHHHHHHHSBSEEEEETTHHHHHHSSSHHHHH CS
  EPSP_synthase 368 k...qlkgaevesydDhRiamalalaglvaegeveiddiectdksfpefeekL 417
                        ++    v +ydDhR+ama++l++l+  +++ + d +c++k++p ++++L
     EPX73209.1 785 YktlKSPTDGVYTYDDHRVAMAFSLLALLTPSPTVVIDKACVEKTWPYWWDVL 837
                    7655566678*****************************************87 PP

>> DHQ_synthase  3-dehydroquinate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  324.5   0.0  3.5e-100   3.9e-97       2     261 ..      77     358 ..      76     359 .. 0.98

  Alignments for each domain:
  == domain 1  score: 324.5 bits;  conditional E-value: 3.5e-100
                   EEE-SSGGGCCHHHHHHHHHHHHHTT--TT-EEEEEESHHHHHHHHHHHHHBTT--EEEEEE-SHHHHHTTTSSSEEEEEETTEEEEEEEE---SEE CS
  DHQ_synthase   2 lvvpdgeksKsletlekildalleakleRksllialGGGvvgDlaGfvAatylRGvrfvqvPttllaqvDssvGgKtainlplgKNliGafaqPkav 98 
                   +++p+ge+sK  +t ++i d++l+++++R++llia+GGGv+gDl+G++Aat++RG+rfvq+Pttlla+vDss+GgKt+i+ plgKNliGaf+qP  v
    EPX73209.1  77 YIIPPGESSKCRATKAEIEDWMLSQSCTRDTLLIAMGGGVIGDLVGYIAATFMRGIRFVQMPTTLLAMVDSSIGGKTGIDAPLGKNLIGAFWQPLRV 173
                   689********************************************************************************************** PP

                   EEEGGGGGGS-HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHHHC.............TTTHHHHHHHHHHHHHHHHHHHHHCCTTTTGGGGGGTT CS
  DHQ_synthase  99 lidlevLktLperelraGlaEviKyalikdeelfelleenaeallk.............eeeeealeeliarsievkaevveeDekekglralLnlG 182
                   ++dl vL+tLp+r++++GlaE+iK+a++++e+ f+lle+n++ l++             ++ ++ l+++i +si++k evv+ De+e glr+lLn+G
    EPX73209.1 174 YVDLLVLHTLPPRQIINGLAEIIKTAAMWNEKDFQLLENNSALLIEeihkpavsgeykfSKIKDLLQKIILSSIRTKCEVVTLDEREGGLRNLLNFG 270
                   *****************************************999999***********97899********************************** PP

                   HHHHHHHHHHHTTTTS-HHHHHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHHHTT---STTTT...........-HHHHHHHHTTCTTX CS
  DHQ_synthase 183 HtigHaiEallgyekllHGeaVaiGmvlaaelseklgllkkeeverllkllkklglpvslkel..........leveellealkkDkkv 261
                   H+igHa+Ea+l + ++lHGe+VaiGm++++el+++lg+lk+++v rl k+l +++lpvs+++           + ve+l+ +++ Dkk+
    EPX73209.1 271 HSIGHAYEAILYP-QILHGECVAIGMMKEVELARHLGILKPNAVGRLAKCLVSYNLPVSVNDPkikkyagfktCPVENLILTMAVDKKN 358
                   ***********99.**********************************************9999999***9999**************8 PP

>> DHquinase_I  Type I 3-dehydroquinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  190.7   0.0   3.9e-59   4.4e-56       2     229 .]    1056    1284 ..    1055    1284 .. 0.92

  Alignments for each domain:
  == domain 1  score: 190.7 bits;  conditional E-value: 3.9e-59
                   EEE--SSHHHHHHHHHHHTTS-SEEEEEGGG-.TT.T......HHHHHHHHHHHHHHTTS-EEEE---GGGT-S.SSS-HHHHHHHHHHHHHCT-S CS
  DHquinase_I    2 vpitgktleeilaelesgkekaDlvElRlDllketse......aedvseeleelrstsdlpliftlrtkaeggrfkrkseeeylellrtaielgad 91  
                   +++  ++++++l  l+ ++ ++D+vE+R+D+lk+++        + v+e+++ lr +++lp+ift+rtk++gg f++++e+++lel+  ai+ g d
   EPX73209.1 1056 LTLNFPDVQQALPLLNDVTLGCDAVEIRVDHLKDPKGkngvptLDFVAEQVALLRCHTHLPIIFTVRTKKQGGLFPDDKEADALELILSAIRYGID 1151
                   578889999999999999559***********988659****************9999************************************** PP

                   EEEEEGG.-.HHGHHHHHHHHHHHTT-EEEEEEEESS----HH...HHHHHHHHHHHTT-SEEEEEE--SSHHHHHHHHHHHHHHHHHT-SS-EEE CS
  DHquinase_I   92 yvDvElt.eapeeskkrlieekreggtkvIvSyhdfegtpsae...elkallekmqalgaDivKiavmaksieDvlrllsltseakeekdeaplIa 183 
                   yvDvEl  +++  s +++ e+k  ++tk+ +S+hd +gt s+    e+++++  + ++  Di+K++ +ak+i+D+l+l +++++++++  ++plIa
   EPX73209.1 1152 YVDVELGwSIE--SITKIFEHK--RNTKLLMSWHDLSGTWSWAspqEWMQMIDLASSFA-DIIKLVGTAKDIKDNLELENFRKSVTST-MKIPLIA 1241
                   ******65444..677888888..*******************9999999999887665.**********************999885.68***** PP

                   EE-TTTTGHHHCHHHHHTB-EEEEESSS-..SSTT-EEHHHHHHHH CS
  DHquinase_I  184 mamGelGkiSRilgevfGspvtfasleeakasapGqltarelreil 229 
                   ++mG +G++SR++++++ +pvt++    ++++apGql++++l+e+l
   EPX73209.1 1242 INMGGKGQLSRVFNKFL-TPVTHPD--LPSKAAPGQLSVKQLNEAL 1284
                   *****************.*******..5566************986 PP

>> SKI  Shikimate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.97   1.1e+03      49      73 ..      93     117 ..      89     119 .. 0.89
   2 !  118.0   0.0   3.7e-37   4.1e-34       1     144 [.     871    1017 ..     871    1034 .. 0.92

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.97
                 HHHHHHHHHHCCCSSEEEEE-TTGG CS
         SKI  49 elEsevlkelleeeglViatGGGav 73 
                 e E  +l + ++++ l ia GGG++
  EPX73209.1  93 EIEDWMLSQSCTRDTLLIAMGGGVI 117
                 5688899999*************97 PP

  == domain 2  score: 118.0 bits;  conditional E-value: 3.7e-37
                  TTSSHHHHHHHHHHHHTSEEEEHHHHHHHHHTS-HHHHHHHHHHHHHHHHHHHHHHHHCCCS..SEEEEE-TTGGGSHHHHHHHH....HHSEEEEE CS
         SKI    1 mGaGKstvGkllAkklglefiDlDeliekrtgksiaeifeeegeegFrelEsevlkelleee..glViatGGGavlseenrellk....ekgiviyL 91  
                  +GaGK+t+Gk+++k+l+++fiDlDe++e+r  + i +++ + g+++Fr +E+++l+e+++e+  g V a GGG+++ +++r+ll+    ++giv+++
  EPX73209.1  871 RGAGKTTIGKIISKQLNMKFIDLDEWLEDRLAMPITQVIFKLGWDAFRLEEHKLLREFIQERpyGFVAASGGGVIEMNDSRKLLEnyvkSGGIVLHV 967 
                  7***********************************************************************************999999******* PP

                  E--HHHHHHHHHHTTSSGGGCSCHHHHHHHHHHHHHHHHHCCSSCEEEECTSS CS
         SKI   92 dvsleellerlkadkeRPllqekskeeelleelaereplyeeaadvvvdesee 144 
                  ++++++++++l++d++RP+++++++    ++ +a+r + y+++  + + +   
  EPX73209.1  968 HRNIDHIVSYLSKDSSRPAYKDQEN---IRDVYARRHEWYRQCRSHYFISPVL 1017
                  *********************9999...7777779999999998887655544 PP

>> Shikimate_dh_N  Shikimate dehydrogenase substrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.3   0.0   1.1e-27   1.3e-24       1      83 []    1297    1377 ..    1297    1377 .. 0.98

  Alignments for each domain:
  == domain 1  score: 86.3 bits;  conditional E-value: 1.1e-27
                      EEESS-TT-SHHHHHHHHHHHCTSSEEEEEEE-SCCTHHHHHHHHHHTTESEEEE-TTSCCHHHGGSSEE-HHHHHHT--SEE CS
  Shikimate_dh_N    1 viGnpikhSlSPaihnaafkalglngsyeafeveedelekaveelralglaGlnvTiPfKeaviplldelseeAkaigAvNti 83  
                      v+G+pi+hS+SP++hn+a+k lgl++syea e++   +e++   lr++++ G+nvTiP+K  +++++d+ls+eA+  gAvNt+
      EPX73209.1 1297 VFGKPISHSRSPVLHNTAYKLLGLPHSYEAYETD--TVEEVEGILRSPDFGGANVTIPYKLPIMQYMDDLSHEARFFGAVNTV 1377
                      89*******************************9..99999999999***********************************8 PP

>> Fe-ADH_2  Iron-containing alcohol dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.7   0.0   2.6e-11   2.9e-08      12     250 .]      31     292 ..      24     292 .. 0.62
   2 ?   -2.4   0.0       2.8   3.2e+03      72     103 ..     861     891 ..     841     894 .. 0.67

  Alignments for each domain:
  == domain 1  score: 33.7 bits;  conditional E-value: 2.6e-11
    Fe-ADH_2  12 ellkelelkkvllvaden....tkkaagekveeslkeagikvevveeveeead.......leeveklvealreketdlvvavGgGtiiDiakyvsak.. 97 
                 e+lke + ++ ++++d+n    + +  ++  ++++k++g + ++++   +  +         e+e+ +   + ++ +l++a+GgG+i D++ y++a+  
  EPX73209.1  31 EILKEFQSSTYVVITDSNiaphHLEPFERIFRDTIKKNGAQSRFLSYIIPPGEsskcratKAEIEDWMLSQSCTRDTLLIAMGGGVIGDLVGYIAATfm 129
                 567777777777777777322222334444555555555555433322222220111111333444333334456679***************997533 PP

    Fe-ADH_2  98 lnvpyvsvpTaa......SvDGfaspgaslvvdgkkrtvakaaaPlaviaDldvlaeAPrrllasGvGDllgkytaladwklanevseplaklsaamvq 190
                 +++++v +pT++      S  G +   a+l ++     +     Pl v++Dl vl++ P r +  G+++++   ta ++ +   +    l ++sa  ++
  EPX73209.1 130 RGIRFVQMPTTLlamvdsSIGGKTGIDAPLGKNL----IGAFWQPLRVYVDLLVLHTLPPRQIINGLAEIIK--TAAMWNEKDFQ---LLENNSALLIE 219
                 799*******955444447778888888888775....333457**************************94..34443333332...23333444444 PP

    Fe-ADH_2 191 eaaeklvedkketealeellealalsgigi........srpa.....SGsEHliSHaldmlalkqalHGeqVG 250
                 e ++ +v+ + + + ++ ll++++ls i +        +r +         H i Ha++++   q lHGe V+
  EPX73209.1 220 EIHKPAVSGEYKFSKIKDLLQKIILSSIRTkcevvtldEREGglrnlLNFGHSIGHAYEAILYPQILHGECVA 292
                 444445555556666677777776666666555555673333455556778**********99******9885 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 2.8
    Fe-ADH_2  72 reketdlvvav.GgGtiiDiakyvsaklnvpyv 103
                 + +   +++++ G+G+   i+k++s +ln++++
  EPX73209.1 861 K-NASIILIGMrGAGKTT-IGKIISKQLNMKFI 891
                 3.3344667775788765.99********9998 PP

>> SDH_C  Shikimate 5'-dehydrogenase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.6   0.0   3.9e-10   4.4e-07       1      30 [.    1541    1570 ..    1541    1571 .. 0.94

  Alignments for each domain:
  == domain 1  score: 29.6 bits;  conditional E-value: 3.9e-10
                  HHHHHHHHHHHHHHHHHS----HHHHHHHH CS
       SDH_C    1 GLgMLveQgaeqFelWTGrepPvevMreal 30  
                  GL+ Lv Qg ++F++WTG+ pP  ++++ +
  EPX73209.1 1541 GLEVLVRQGLASFQMWTGMNPPFSPVYKKV 1570
                  9**********************9999865 PP

>> Shikimate_DH  Shikimate / quinate 5-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.0   4.5e-08     5e-05       9      68 ..    1410    1470 ..    1403    1519 .. 0.83

  Alignments for each domain:
  == domain 1  score: 23.4 bits;  conditional E-value: 4.5e-08
                    ..TT-EEEEES-SHHHHHHHHHHHCCT-CEEEEEESSHHHHHHHHHHH.T.ET-EEEEGCG CS
  Shikimate_DH    9 slkekkvlliGaGemaelvakhLlakgvkkvvvaNRtlerakelaeel.kgeeiealklee 68  
                    sl+e+ +l+iGaG +++ ++  L++ gv ++  +NRtl++  ++ + +  +++i++l+ ++
    EPX73209.1 1410 SLAESSALVIGAGGTSRAAIYTLHRLGVSQIYLVNRTLANSYAVQNVFpPEYNIKVLDADK 1470
                    689999*************************************999994455555555544 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       4.9   5.4e+03      17      82 ..     300     371 ..     299     384 .. 0.75
   2 !   19.5   0.0   9.7e-07    0.0011       1      45 [.     865     912 ..     865     971 .. 0.64

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 4.9
      AAA_18  17 eLskrlgf......gvnlrdvakenglllevdpe.....aldeskrldedkldklldaleenssaleegknlvidgh 82 
                 eL+++lg+      g+  +++++ n ++  +dp+      ++ + +++   ++++ +++++  +      ++++  +
  EPX73209.1 300 ELARHLGIlkpnavGRLAKCLVSYNLPVSVNDPKikkyaGFKTCPVENLILTMAVDKKNQGTKK-----RVVILKAI 371
                 7888888889999999999999999999999999888877777777777777777777777654.....55555554 PP

  == domain 2  score: 19.5 bits;  conditional E-value: 9.7e-07
      AAA_18   1 IlltGtpGvGKttlakeLskrlgfgvnlrdvakenglllevdpe...a 45 
                 I+l G+ G+GKtt++k +sk l++ ++  d + e++l  + ++     
  EPX73209.1 865 IILIGMRGAGKTTIGKIISKQLNMKFIDLDEWLEDRLAMPITQVifkL 912
                 99********************99999999999999888888773331 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       9.1     1e+04      60      74 ..     214     228 ..     194     258 .. 0.65
   2 ?   13.6   0.0   6.2e-05     0.069       1      30 [.     865     894 ..     865     931 .. 0.92
   3 ?   -2.4   0.0       5.5   6.2e+03      81     111 ..    1394    1424 ..    1387    1436 .. 0.80

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 9.1
                 EEEEEETGGGHHHHH CS
         AAA  60 silfiDEidalaksr 74 
                 s l+i+Ei++ a s 
  EPX73209.1 214 SALLIEEIHKPAVSG 228
                 678888888766555 PP

  == domain 2  score: 13.6 bits;  conditional E-value: 6.2e-05
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEE CS
         AAA   1 vllyGppGtGKTllakavakelgvefleis 30 
                 ++l+G  G GKT++ k + k+l+++f+ ++
  EPX73209.1 865 IILIGMRGAGKTTIGKIISKQLNMKFIDLD 894
                 689**********************99875 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 5.5
                  HHHHHHHHHHHHHHHTTTSSSTEEEEEEESS CS
         AAA   81 eeervvnqLlteldgvkkkeskvivigatnr 111 
                  + + + +++ ++ldg++  es  +viga+ +
  EPX73209.1 1394 DWRGIYDTFTAALDGMSLAESSALVIGAGGT 1424
                  556678899999*******9*******9765 PP

>> Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       3.4   3.8e+03      56      81 ..     947     972 ..     944     976 .. 0.83
   2 ?   -2.7   0.0         6   6.8e+03      83     101 ..    1139    1157 ..    1137    1176 .. 0.74
   3 ?   11.5   0.0   0.00024      0.27       2      61 ..    1417    1473 ..    1416    1539 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 3.4
                      TTTHHHHHHHHHTTSSEEEE-SSGGG CS
  Sacchrp_dh_NADP  56 aenyeavLaallkegdlvvnlsppis 81 
                       ++ +++L+ ++k+g++v+++  +i 
       EPX73209.1 947 MNDSRKLLENYVKSGGIVLHVHRNID 972
                      5788899************9977765 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 6
                       HHHHHHHHHHT-EEEESS- CS
  Sacchrp_dh_NADP   83 ldvlkaCietgvhyvdtsi 101 
                       l+++  +i+ g++yvd++ 
       EPX73209.1 1139 LELILSAIRYGIDYVDVEL 1157
                       567778999*******765 PP

  == domain 3  score: 11.5 bits;  conditional E-value: 0.00024
                       EEE--SHHHHHHHHHHHCTCCT-GEEEEEESSHHHHHHHHCHHTTTCEEEEE--TTTHHH CS
  Sacchrp_dh_NADP    2 liiGaGsvGqavaellarhfdvdaeitvadrskeklealaakalgvrfeaialdaenyea 61  
                       l+iGaG++++a++  l+r +    +i ++ r++++  a+ +++  ++ +++ lda+++++
       EPX73209.1 1417 LVIGAGGTSRAAIYTLHRLGVS--QIYLVNRTLANSYAV-QNVFPPEYNIKVLDADKVTS 1473
                       89*****************988..***********6555.56778888888888887665 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       9.9   1.1e+04      34      98 ..     350     410 ..     345     420 .. 0.60
   2 ?   12.9   0.0   7.8e-05     0.088       4      49 ..     864     904 ..     861     926 .. 0.77
   3 ?   -3.4   0.0         8     9e+03      14      42 ..    1039    1064 ..    1038    1070 .. 0.79

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 9.9
      AAA_14  34 lyinldderdkkladpekllelileklkeekktylflDEiqevpewekalkslvdegknldvivt 98 
                 l +++d++++ +++    +l++i e +++ + t++  D i  v +    + ++ +++  ldv++t
  EPX73209.1 350 LTMAVDKKNQGTKKRV-VILKAIGETYEK-HATVVSDDDIRFVLSSDVKVDNFTENS--LDVVIT 410
                 5566666555333322.356666666444.667777777888877777777777766..677776 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 7.8e-05
      AAA_14   4 ilvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladp 49 
                  +++ G+R +GKTt+  ++i+++l    ++ +i+ld+  +++la p
  EPX73209.1 864 SIILIGMRGAGKTTI-GKIISKQL----NMKFIDLDEWLEDRLAMP 904
                 689************.67888888....899999998666665554 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 8
      AAA_14   14 GKTtllkqlikellvkkesilyinldder 42  
                  GK+  l++l +++    + +l +n+ d +
  EPX73209.1 1039 GKSQSLQKLKEKKR---SAFLTLNFPDVQ 1064
                  99999999976666...899999987755 PP

>> ThiF  ThiF family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   9.4e-05      0.11      15      59 ..    1410    1477 ..    1399    1484 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 9.4e-05
                  HHHTSEEEEE--SHHHHHHHHHHHHHTTT.......................EEEEEESSB--GGGGG CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......................xxxxxxxxxxxxxxxx RF
        ThiF   15 kLrdskvllvGaGglGsellknLalsGvg.......................kltlvDnDkielsNln 59  
                   L++s+ l++GaGg    ++ +L ++Gv+                       ++++ D Dk+  ++ln
  EPX73209.1 1410 SLAESSALVIGAGGTSRAAIYTLHRLGVSqiylvnrtlansyavqnvfppeyNIKVLDADKVTSEDLN 1477
                  6899*************************666666666666666666666666666666666666666 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   0.00011      0.13       2      39 ..     865     903 ..     865     935 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00011
      AAA_33   2 vllvGlpGsGKstlaerllkklgavllssdtlrr.rlfg 39 
                 ++l+G+ G+GK+t  + + k+l + +++ d++++ rl+ 
  EPX73209.1 865 IILIGMRGAGKTTIGKIISKQLNMKFIDLDEWLEdRLAM 903
                 689****************************99855554 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       9.8   1.1e+04      93     142 ..     209     257 ..     182     258 .. 0.61
   2 ?    9.0   0.0    0.0015       1.7      17      51 ..     851     889 ..     847     933 .. 0.74
   3 ?    0.9   0.0      0.48   5.3e+02      35      86 ..    1038    1087 ..    1038    1146 .. 0.80

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 9.8
      AAA_16  93 eleawrekleealaavpelagaea.srllellkrll.allsrderplvlvlD 142
                 +le  ++ l e++   p+++g+ + s + +ll++++ + ++++ +  v++lD
  EPX73209.1 209 LLENNSALLIEEIH-KPAVSGEYKfSKIKDLLQKIIlSSIRTKCE--VVTLD 257
                 33333333333333.566677766888999999999777777555..77777 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0015
      AAA_16  17 ervrsgrp....elvllsGesGvGKsslvrellralekd 51 
                 e+v ++ p     +++l+G++G GK+++ + + ++l+ +
  EPX73209.1 851 EQVEQQNPlsknASIILIGMRGAGKTTIGKIISKQLNMK 889
                 566666666666899************988888777655 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.48
      AAA_16   35 vGKsslvrellralekdggiflrgkcdqlesaipysa.laqalareellrqll 86  
                  +GKs  +++l++   k++  fl+ ++ + ++a+p++  ++  +++ e+  + l
  EPX73209.1 1038 TGKSQSLQKLKE---KKRSAFLTLNFPDVQQALPLLNdVTLGCDAVEIRVDHL 1087
                  7**********6...66689************999666666665555555555 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00034      0.38       8      36 ..     859     887 ..     856     896 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00034
                 EETTSEEEEEESTTSSHHHHHHHHTTSS- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   8 lkegekvaivGenGaGKStLlkllagllk 36 
                 l+++  + ++G  GaGK+t+ k+++++l+
  EPX73209.1 859 LSKNASIILIGMRGAGKTTIGKIISKQLN 887
                 56788899*****************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1572 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       567  (0.0316247); expected 358.6 (0.02)
Passed bias filter:                      553  (0.0308439); expected 358.6 (0.02)
Passed Vit filter:                        91  (0.00507558); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.98u 0.33s 00:00:01.31 Elapsed: 00:00:00.53
# Mc/sec: 8954.10
//
Query:       EPX73210.1  [L=103]
Description: histone H4 h4.2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-08   35.0   0.1    1.5e-08   34.7   0.1    1.2  1  CENP-T_C       Centromere kinetochore component CENP-T histon
      1e-05   25.7   0.1    1.7e-05   25.0   0.0    1.5  1  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a
      5e-05   23.4   0.1    6.7e-05   23.0   0.1    1.2  1  TAF            TATA box binding protein associated factor (TA
    5.6e-05   23.5   0.2    6.4e-05   23.3   0.2    1.2  1  Histone        Core histone H2A/H2B/H3/H4
     0.0002   21.7   0.1    0.00028   21.2   0.1    1.4  1  CENP-S         CENP-S protein
  ------ inclusion threshold ------
      0.015   15.4   0.0      0.017   15.2   0.0    1.1  1  TFIID-31kDa    Transcription initiation factor IID, 31kD subu
      0.063   13.3   0.0      0.087   12.8   0.0    1.3  1  Bromo_TP       Bromodomain associated
       0.13   12.8   0.0       0.25   11.9   0.0    1.4  1  TFIID_20kDa    Transcription initiation factor TFIID subunit 


Domain annotation for each model (and alignments):
>> CENP-T_C  Centromere kinetochore component CENP-T histone fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.7   0.1   6.9e-12   1.5e-08      16      79 ..      33      96 ..      18      99 .. 0.85

  Alignments for each domain:
  == domain 1  score: 34.7 bits;  conditional E-value: 6.9e-12
    CENP-T_C 16 lakrfakasgskaklekealkalekasdkffeqvgeDLeayakHagRKtidesDvilLmkrqrk 79
                 a r   ++g  +++++  ++    +++ f+e v +D  +y++Ha+RKt+ + Dv+  +krq++
  EPX73210.1 33 PAIRRLARRGGVKRISALVYEETRAVLKLFLESVIRDAVTYTEHAKRKTVTSLDVVYSLKRQGR 96
                4444444456777999999999****************************************86 PP

>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.0   7.7e-09   1.7e-05       7      61 ..      34      87 ..      28      91 .. 0.93

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 7.7e-09
                   HHHHHHHCCTTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHH CS
  CBFD_NFYB_HMF  7 rvkkImksdpdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehi 61
                   +++++ +   ++++i+  + e    ++++f+e++ + A+ +++++krKt++  ++
     EPX73210.1 34 AIRRLARRG-GVKRISALVYEETRAVLKLFLESVIRDAVTYTEHAKRKTVTSLDV 87
                   688999999.99***************************************9998 PP

>> TAF  TATA box binding protein associated factor (TAF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.1     3e-08   6.7e-05       4      66 .]      30      92 ..      27      92 .. 0.91

  Alignments for each domain:
  == domain 1  score: 23.0 bits;  conditional E-value: 3e-08
                --HHHHHHHHHHTT---B-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SSB-HHHHHHHH- CS
         TAF  4 lpkesvkviAeslGitnLsdeaaalLaedveyrlkeivqeaakfmrhskRqkLtvaDvdsALr 66
                ++k +++ +A   G++ +s+ + ++    ++  l  ++++a+ +++h+kR++ t+ Dv ++L+
  EPX73210.1 30 ITKPAIRRLARRGGVKRISALVYEETRAVLKLFLESVIRDAVTYTEHAKRKTVTSLDVVYSLK 92
                577789999999999999999999999999999*************************99997 PP

>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.2   2.9e-08   6.4e-05      77     125 ..      40      88 ..      16      94 .. 0.86

  Alignments for each domain:
  == domain 1  score: 23.3 bits;  conditional E-value: 2.9e-08
                 TTSSSXEEXHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTXSEEXHHHHH CS
     Histone  77 sekedlrisaeavlalqealEallvelfeeAnllakhaKRvTitpkDiq 125
                 +++  +risa   +   ++l+ +l+++  +A  +++haKR+T+t+ D+ 
  EPX73210.1  40 RRGGVKRISALVYEETRAVLKLFLESVIRDAVTYTEHAKRKTVTSLDVV 88 
                 477788999999999999***************************9986 PP

>> CENP-S  CENP-S protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.1   1.2e-07   0.00028      34      73 ..      47      94 ..      20      96 .. 0.81

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 1.2e-07
      CENP-S 34 ltelvykq........lenlakDLeaFakHAkRstittdDvlLlaRrn 73
                ++ lvy++        le++ +D  ++ +HAkR+t+t  Dv+  ++r+
  EPX73210.1 47 ISALVYEEtravlklfLESVIRDAVTYTEHAKRKTVTSLDVVYSLKRQ 94
                5566666655555555889999*******************9988875 PP

>> TFIID-31kDa  Transcription initiation factor IID, 31kD subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.0   7.7e-06     0.017      13      69 ..      37      93 ..      31     101 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 7.7e-06
  TFIID-31kDa 13 liLaslgvteyeerVvlqLldfayrytssvLedAkvlaehakkkevslddvrlAiqs 69
                  + +  gv+ ++  V++    +   +  sv++dA ++ ehak+k+v+  dv  +++ 
   EPX73210.1 37 RLARRGGVKRISALVYEETRAVLKLFLESVIRDAVTYTEHAKRKTVTSLDVVYSLKR 93
                 556667888888888888888888999***********************9888765 PP

>> Bromo_TP  Bromodomain associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   3.9e-05     0.087      35      70 ..      58      93 ..      37      97 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3.9e-05
                HHHHHHHHHHHHHHHHHTTSS-SS--HHHHHHHHHH CS
    Bromo_TP 35 iaqkYirelgeqaksfaehagRseptlkDvvltLqe 70
                +++ +++++ ++a  + eha R ++t  Dvv +L++
  EPX73210.1 58 VLKLFLESVIRDAVTYTEHAKRKTVTSLDVVYSLKR 93
                6777999999***********************997 PP

>> TFIID_20kDa  Transcription initiation factor TFIID subunit A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00011      0.25      33      65 ..      62      94 ..      51      95 .. 0.94

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00011
                 HHHHHHHHHHHHHHHTT-SEE-HHHHHHHHHHH CS
  TFIID_20kDa 33 FvesvtkfacklakhRksdklevrDiqlhlern 65
                 F esv+  a+    h k +++ + D+ + l+r+
   EPX73210.1 62 FLESVIRDAVTYTEHAKRKTVTSLDVVYSLKRQ 94
                 9******************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       511  (0.0285013); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.44
# Mc/sec: 709.10
//
Query:       EPX73211.1  [L=136]
Description: histone H3 h3.1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.8e-52  175.8   1.4    5.4e-52  175.6   1.4    1.0  1  Histone        Core histone H2A/H2B/H3/H4
    1.2e-05   25.6   0.0    1.8e-05   25.0   0.0    1.2  1  CENP-S         CENP-S protein
    0.00015   21.8   0.0     0.0003   20.9   0.0    1.5  1  CENP-T_C       Centromere kinetochore component CENP-T histon
    0.00026   21.6   1.4    0.00032   21.3   1.4    1.1  1  PAF            PCNA-associated factor histone like domain
     0.0022   18.3   0.2     0.0049   17.1   0.0    1.6  2  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a


Domain annotation for each model (and alignments):
>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.6   1.4   1.5e-55   5.4e-52       1     131 []       1     132 [.       1     132 [. 0.99

  Alignments for each domain:
  == domain 1  score: 175.6 bits;  conditional E-value: 1.5e-55
                 XXEESXEEEXXXXEEXXXXXXXXXXHT.TS-SSSSB--TTT-XTTHHHHHHHHHHHHXXSXXSXHHHHHHHHHHHH.TTSSSXEEXHHHHHHHHHHHHH CS
     Histone   1 marekekarkesektapekkvsakker.kasskskkkkkrryrpgtvalkeirkyqkstdlliqklpfaRvvreivksekedlrisaeavlalqealEa 98 
                 mar+k++ark+++++ap+k++++k +r  a+++   kk++ryrpgtval+eir+yqkst+lli+klpf+R+vrei +++k+dlr++++av alqea+Ea
  EPX73211.1   1 MARTKQTARKSTGGKAPRKQLASKAARkAAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVGALQEAVEA 99 
                 9**************************9*********************************************************************** PP

                 HHHHHHHHHHHHHHHTTXSEEXHHHHHHHHHHT CS
     Histone  99 llvelfeeAnllakhaKRvTitpkDiqlArrlr 131
                 +lv+lfe++nl+a+h KRvTi+pkD+qlArrlr
  EPX73211.1 100 YLVSLFEDTNLCAIHGKRVTIQPKDMQLARRLR 132
                 *******************************97 PP

>> CENP-S  CENP-S protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.0     5e-09   1.8e-05      13      71 ..      70     130 ..      65     133 .. 0.85

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 5e-09
      CENP-S  13 kiveeeaa..ekeveatkqfiaaltelvykqlenlakDLeaFakHAkRstittdDvlLlaR 71 
                 ++v+e+a+  ++++++ +++++al e v + l +l +D ++ a H kR ti+++D+ L  R
  EPX73211.1  70 RLVREIAQdfKTDLRFQSSAVGALQEAVEAYLVSLFEDTNLCAIHGKRVTIQPKDMQLARR 130
                 5566654423667789999*************************************99766 PP

>> CENP-T_C  Centromere kinetochore component CENP-T histone fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0   8.3e-08    0.0003      11      72 ..      70     127 ..      58     135 .. 0.83

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 8.3e-08
    CENP-T_C  11 avvkklakrfakasgskaklekealkalekasdkffeqvgeDLeayakHagRKtidesDvil 72 
                  +v+ +a++f     +  + + +a+ al++a + ++  + eD +  a H++R ti+ +D+ l
  EPX73211.1  70 RLVREIAQDF----KTDLRFQSSAVGALQEAVEAYLVSLFEDTNLCAIHGKRVTIQPKDMQL 127
                 3455566666....56799****************************************975 PP

>> PAF  PCNA-associated factor histone like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   1.4   8.9e-08   0.00032       1      62 [.       1      58 [.       1      76 [. 0.90

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 8.9e-08
         PAF  1 mVRTkAdvssarkavaakAprkslgassssssssssspkkkkkkyvGGNpvcpRptPaWQKp 62
                m RTk ++   rk  ++kAprk+l+++   +++  ++  kk + y +G  v  R++   QK 
  EPX73211.1  1 MARTKQTA---RKSTGGKAPRKQLASKAARKAAPATGGVKKPHRYRPG-TVALREIRRYQKS 58
                99******...******************9999999988888888888.6888999888885 PP

>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1       1.9   6.9e+03      39      48 ..      20      29 ..      19      32 .. 0.64
   2 !   17.1   0.0   1.4e-06    0.0049       2      64 ..      65     128 ..      64     128 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 1.9
                   HHHHHHHHHH CS
  CBFD_NFYB_HMF 39 elaseAaeic 48
                   +las+Aa+++
     EPX73211.1 20 QLASKAARKA 29
                   5677777654 PP

  == domain 2  score: 17.1 bits;  conditional E-value: 1.4e-06
                    XXXHHHHHHHHHCC.TTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHH CS
  CBFD_NFYB_HMF   2 eLPiarvkkImksd.pdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehiklA 64 
                    +LP  r  + + +d + + ++ ++A   ++e+ve ++ +l + ++  + + kr ti++++++lA
     EPX73211.1  65 KLPFQRLVREIAQDfKTDLRFQSSAVGALQEAVEAYLVSLFEDTNLCAIHGKRVTIQPKDMQLA 128
                    78888888877777799999*****************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       435  (0.0242624); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.44
# Mc/sec: 935.34
//
Query:       EPX73212.1  [L=569]
Description: mannosyltransferase complex subunit Alg9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   2.1e-105  353.4  33.4   2.5e-105  353.1  33.4    1.0  1  Glyco_transf_22  Alg9-like mannosyltransferase family


Domain annotation for each model (and alignments):
>> Glyco_transf_22  Alg9-like mannosyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  353.1  33.4  1.4e-109  2.5e-105       1     417 []      16     438 ..      16     438 .. 0.93

  Alignments for each domain:
  == domain 1  score: 353.1 bits;  conditional E-value: 1.4e-109
  Glyco_transf_22   1 wifllllalrlllalltqtsfdpDEffqslEvahklvfgkgtltWEyspkygiRSylfllllalpyrllaelvadskiavlyapRlllallsal 94 
                      w+f++ll+lrl++a +  +  d+DE+++++E++h+l++g+g++tWEysp+y+iRS++++ll+a+p+  +a++++ s+ +v+y++R ++a++sa+
       EPX73212.1  16 WTFSILLVLRLTSASFRVID-DCDEVYNYWEPLHYLLYGYGLQTWEYSPEYSIRSWFYVLLHAIPA-AVAKSMGLSRLHVFYFVRGVMACFSAF 107
                      99******************.*******************************************99.7889999******************** PP

  Glyco_transf_22  95 idyylfravcrkygseiakialllslsswglfvfstrtfsnslemlltsialyllsellsrenksssnekylvavlliavlavliRptsallwl 188
                      ++  l++av+r++++++a ++++++++s+g++v+st+++++s++m ++++ l++ ++         s+ ++++++++++++a+l++p+sa+l++
       EPX73212.1 108 CEATLVQAVARNFNRAVALHLTSILFVSSGIWVASTSFLPSSFAMNMVTLSLSAQLS-------LPSTRRTVKVLSFVVIGAILGWPFSAALSI 194
                      *******************************************************97.......45667788999******************* PP

  Glyco_transf_22 189 plvlflllrlvkkrsktflfliialvllvlllvlvlviliDslfYgkfvftplnflkyNvl...snlsslyGvhPwyfYllqnlpnilgvllla 279
                      p+vl  l++++++++ ++   ++++  lv ll+++++i++Ds fY+k+ f+ +n++kyNv+   ++++++yG++Pw++Y+ +  +++++++++a
       EPX73212.1 195 PFVLLELMDIRRQFVPLI--TRWLKAGLVCLLITAICIAVDSFFYQKLEFVAWNIVKYNVFakdGRGPEIYGTEPWWYYFANLTLQHNIAFWFA 286
                      *******88888877777..*****************************************99999**************************** PP

  Glyco_transf_22 280 vllgllvllsr.......kvsr.lllllltilltLlvysllpHKElRFllpvlPlillsaavlltrls...........resakvskk...... 348
                      +++g++v ++        +    l++++++++l+Ll++ l+pHKE+RF++p++P+++l  av+l+++            r       +      
       EPX73212.1 287 LVCGPFVFIAAltnwinlDSFLdLSSVISPFYLWLLIFLLQPHKEERFMYPIYPVLCLAGAVGLDMFVkinmnlytsvtR-------Rarstfp 373
                      ********5556789999455559*******************************************9999977554331.......2335567 PP

  Glyco_transf_22 349 ...lsllvllllfnvvlalllglvhqagvillv.evmseleetkrknrkekketssvyvlkecyrtPsssylh 417
                         l+l ++ l++ +++a++l++ ++++++++v +++  le+ +       +++++++v+ke+yr+Pss++l+
       EPX73212.1 374 vriLVLIIYALMGFISIARILAV-QNYNAPMIVyPALTYLEASE-------NPITNICVGKEWYRYPSSFFLP 438
                      66778888889999*******98.9999999999*******998.......789*****************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (569 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       563  (0.0314016); expected 358.6 (0.02)
Passed bias filter:                      247  (0.0137766); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.34s 00:00:01.01 Elapsed: 00:00:00.55
# Mc/sec: 3121.23
//
Query:       EPX73213.1  [L=329]
Description: mo25 family protein Pmo25 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     5e-125  417.2  14.6   5.7e-125  417.0  14.6    1.0  1  Mo25      Mo25-like


Domain annotation for each model (and alignments):
>> Mo25  Mo25-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  417.0  14.6  3.2e-129  5.7e-125       1     326 [.       3     329 .]       3     329 .] 0.99

  Alignments for each domain:
  == domain 1  score: 417.0 bits;  conditional E-value: 3.2e-129
        Mo25   1 flfkk.qktpaelvkslkellskldnskkkkkaeeelskqLkslkeillgdpdtepskeqvaqLlqeilkedllyklvknlkklefearkdvaqifsnl 98 
                 flf k +k+++++v++l ell++++  ++kkk+ ee++k+L++l+  l+g+++tep+ +qv++L  +i+++++l +lv+nl+kl+fe+rkd+  ifs +
  EPX73213.1   3 FLFAKrPKSNQDVVRNLCELLHRVEGIQDKKKLFEEIAKNLQTLRISLCGTSETEPHADQVSELSLQIYQSNVLLLLVRNLRKLDFESRKDTGLIFSAM 101
                 789999*******************9999********************************************************************** PP

        Mo25  99 lrrktksklpaveyletkpeilqlllegyeskeialhagsilrecikyealariiLyseefwkffeyvensnfeiasdafetlkelLtkhkklvaefle 197
                 lrr+++s+ p+v+yl  +++i+ +l++ y+ +e+a +ag+ilrec++++ l++++L+ ++fw ff++v+ ++f+iasdaf+t+k+lL +hk+ va+f+ 
  EPX73213.1 102 LRRQVASRCPTVDYLMGNTSIFPVLISYYQYTESAFTAGTILRECARHDILNQVLLETSQFWLFFDLVQAPSFDIASDAFSTFKTLLLTHKHRVADFIF 200
                 ******************************99******************************************************************* PP

        Mo25 198 enfdeffkyinkllqsenYVtkrqslkLLgelLldrsnlkvmtrYvsspenLklimnlLkdkskniqfeaFhvFKvfVanpnKskpvqkiLikNrdkLl 296
                 +nfd+ff++++ ll+senYVtkrqslkLLge+Ll+r+n++vmtrY++s enLkl+m lL+dkskniqfeaFhvFK+fVanp+Ks++v++iL +N++kLl
  EPX73213.1 201 KNFDRFFSNFTVLLNSENYVTKRQSLKLLGEILLNRANYSVMTRYLASAENLKLMMILLRDKSKNIQFEAFHVFKLFVANPEKSPEVVEILRRNKSKLL 299
                 *************************************************************************************************** PP

        Mo25 297 kfledfqtdreeDeqfkdEkeflikqieeL 326
                 ++l+ f++dr++Deqf+dE++f++kqie+L
  EPX73213.1 300 TYLSVFHNDRKNDEQFNDERAFILKQIERL 329
                 ****************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (329 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       781  (0.0435607); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.31s 00:00:00.88 Elapsed: 00:00:00.50
# Mc/sec: 1981.07
//
Query:       EPX73214.1  [L=555]
Description: kinesin-like protein Klp3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   1.6e-110  369.2   1.8   2.6e-110  368.5   1.8    1.3  1  Kinesin      Kinesin motor domain
      2e-25   89.5   0.2      6e-25   87.9   0.0    1.9  2  Microtub_bd  Microtubule binding
  ------ inclusion threshold ------
       0.14   12.1   0.0        0.8    9.7   0.0    2.0  2  Mucin        Mucin-like glycoprotein
        3.1    7.8   7.5       0.49   10.4   0.2    3.0  3  Sec2p        GDP/GTP exchange factor Sec2p
          6    6.6   6.6       0.34   10.6   0.4    2.1  3  DUF745       Protein of unknown function (DUF745)
        8.8    6.3   8.0         11    6.1   0.3    3.3  3  DUF87        Helicase HerA, central domain


Domain annotation for each model (and alignments):
>> Kinesin  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  368.5   1.8  8.7e-114  2.6e-110       1     333 []       9     325 ..       9     325 .. 0.96

  Alignments for each domain:
  == domain 1  score: 368.5 bits;  conditional E-value: 8.7e-114
                 EE-SSSHHHHTTTTEBCEEEECTCTCEEEEEEEEECTTSCEEEEESEEEETTS-HHHHHHHHHHHHHHHHHTTSEEEEEEEESTTSSHHHHHTBC..TT CS
     Kinesin   1 RvRplnekekeeeeeeeveveeekkeeekkskkenkeeeekkfkFdkvfdeeatqeevyeetakplvesvleGynatifaYGqtgsGKTyTmegk..ee 97 
                 R+Rp n+ e++   ee+v+      + ++++ + n+++++ +f +d+vf+ ++tqe++++  +kp v+++++Gyn+t++aYGqtgsGKTyTm+g   + 
  EPX73214.1   9 RIRPSNSFEQSLGFEEIVS------PLNENTVHINTNDYTGNFVYDRVFGADSTQEDLFSYSIKPTVDDLFQGYNGTVLAYGQTGSGKTYTMMGVegDP 101
                 8999999999999999986......568899999999*********************************************************98888 PP

                 TSBSHHHHHHHHHHHHHHHCTTTHEEEEEEEEEEEEEETTEEEETTSTTTTSTSSEBEEEECTTSCCEEETTS--EEESSHHHHHHHHHHHHHHHTSTT CS
     Kinesin  98 eeeGiipraleelFesikkekeekekefsvkvsylEiYneeiyDLLeskkskkkkklkiredskkgevyvkgltevevksaeevlellekgeknrkvae 196
                 e++G++pr+l+++F++i+++ ++  +e++vkvsy+EiY+e+i+DLL+++    + +l+++e++ +g vyv+gl++v v+s  e++++l++g ++r+va+
  EPX73214.1 102 ENSGLTPRMLHRIFDKIRSSPST--TEYEVKVSYMEIYMEKIRDLLSPD----NDHLTVHENKLQG-VYVEGLKTVYVSSEAEAFQILNQGMNSRAVAS 193
                 99***************998876..99*********************9....456********98.******************************** PP

                 SSCTSHHCCSEEEEEEEEEEEETTTTTCEEEEEEEEEEEEEEECCCHHHHSSTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTSTSCGGGSHHHHHTG CS
     Kinesin 197 tklneeSSRSHavftitleqknlkeeteekvkisklnLvDLAGsErasktgaaegerlkEaaniNkSLlaLgrvisaLaekkkskhipYRdSkLTrlLq 295
                 t++n++SSRSH++f +++ q+n++++++   ++++l LvDLAGsE + k+ga  g++l+Ea++iN+SL++Lg vi++L+e+ k+ hipYRdSkLTr+L+
  EPX73214.1 194 TNMNATSSRSHSIFVVEVVQTNNSSGET---RRGRLFLVDLAGSESVGKSGA-VGQTLEEAKKINRSLSTLGMVINSLTEN-KHGHIPYRDSKLTRILK 287
                 **********************776554...9*******************6.6999************************.***************** PP

                 GGHSSSSEEEEEEEE-TBGGGHHHHHHHHHHHHHHCTT CS
     Kinesin 296 dsLgGnsktlmivtvspssenleetlstlkfaerakei 333
                 +sLgGns+t++i+++sps  n++etlstl+f++rak+i
  EPX73214.1 288 ESLGGNSRTTLIINCSPSIYNASETLSTLRFGNRAKNI 325
                 ************************************98 PP

>> Microtub_bd  Microtubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.9   0.0     2e-28     6e-25      22     149 .]       4     145 ..       2     145 .. 0.87
   2 ?   -3.0   0.0       2.1   6.2e+03      95     127 ..     238     270 ..     204     275 .. 0.75

  Alignments for each domain:
  == domain 1  score: 87.9 bits;  conditional E-value: 2e-28
                  -EEEEEEECCCS-T.EEEETTT...............TTTEEEE-SEEEECTTHCCCCCC.CCHHHHHHHHTT--EEEEEEES............... CS
  Microtub_bd  22 iRvfarvrpelesekakikfpe............eekkkkkefsFdrvfeseseqeevfe.eisqlvqsaldgynvcifaygqTGsGKtyTmeg...e 103
                  + v  r+rp+++ e  ++ f+e            ++++ + +f +drvf ++s+qe++f+  i+  v+  ++gyn +++aygqTGsGKtyTm+g   +
   EPX73214.1   4 VKVVSRIRPSNSFE-QSLGFEEivsplnentvhiNTNDYTGNFVYDRVFGADSTQEDLFSySIKPTVDDLFQGYNGTVLAYGQTGSGKTYTMMGvegD 100
                  67888999988887.455555344444556777777788999***********9999997479******************************99989 PP

                  ....ST-HCHHHHHHHHHHCCTSCCCCEEEEEEEEEEESS-EEETT CS
  Microtub_bd 104 eeeagmipraveeifetiselkekgwkyeielqfveiynekvqDlL 149
                   e++g +pr+++ if++i++    + +ye++++++eiy ek++DlL
   EPX73214.1 101 PENSGLTPRMLHRIFDKIRSS-PSTTEYEVKVSYMEIYMEKIRDLL 145
                  9******************99.789********************8 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 2.1
                  .............ST-HCHHHHHHHHHHCCTSC CS
  Microtub_bd  95 GKtyTmegeeeeagmipraveeifetiselkek 127
                  GK+  + ++ eea++i+r+++++  +i++l+e+
   EPX73214.1 238 GKSGAVGQTLEEAKKINRSLSTLGMVINSLTEN 270
                  777777777788888888888888777777554 PP

>> Mucin  Mucin-like glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.58   1.7e+03      93     123 ..     417     449 ..     408     457 .. 0.69
   2 ?    9.7   0.0   0.00027       0.8      81     136 ..     482     538 ..     472     542 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.58
       Mucin  93 sdavttae..aPtttttrapsrlrevdGslsss 123
                 s+ + t++  a     +ra ++l++ dG lss+
  EPX73214.1 417 SQLLDTSKaeAVEQLYARAQTELKDRDGLLSST 449
                 4445555500555567999999**99*999985 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00027
       Mucin  81 tttttttateaPsdavttaeaPtt.tttrapsrlrevdGslsssaWvcaPLllavsa 136
                 +t++t ++ e Ps+ v   e     ++     +l  +d sl+s ++v+  Ll avsa
  EPX73214.1 482 ATSQTSSTVETPSSVVKHDEDQVNqERELLLQKLSAMDTSLTSLVYVQQRLLQAVSA 538
                 6778889999***8888777654403344568999*********************9 PP

>> Sec2p  GDP/GTP exchange factor Sec2p
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.2      0.38   1.1e+03      35      66 ..     327     358 ..     322     364 .. 0.86
   2 ?   10.4   0.2   0.00016      0.49      44      82 ..     424     462 ..     419     469 .. 0.87
   3 ?   -1.5   0.2      0.87   2.6e+03      42      68 ..     498     524 ..     492     536 .. 0.68

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.38
                 HHHHHHHHHHHHHHHHHHHHHHHHHTTHCHCC CS
       Sec2p  35 NkmVaaarkekealekkneklkeqLkeketll 66 
                 Nk V++ + + +++++k +  ke L++++  l
  EPX73214.1 327 NKVVVNSELSMDEMKRKLHFYKELLSHCDCNL 358
                 89999999999999999999999999988655 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00016
                 HHHHHHHHHHHHHHHHTTHCHCCCHCTSSSSHHHHCTTT CS
       Sec2p  44 ekealekkneklkeqLkeketlleslqeqLkeLkevlek 82 
                 + ea+e+   + +++Lk+ + ll+s  +qL+ L ++l +
  EPX73214.1 424 KAEAVEQLYARAQTELKDRDGLLSSTRQQLSYLMDALGD 462
                 5789999999*********************99887765 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 0.87
                 HHHHHHHHHHHHHHHHHHTTHCHCCCH CS
       Sec2p  42 rkekealekkneklkeqLkeketlles 68 
                 ++++++++++ e l ++L+  +t l s
  EPX73214.1 498 KHDEDQVNQERELLLQKLSAMDTSLTS 524
                 456666666677777777666666655 PP

>> DUF745  Protein of unknown function (DUF745)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.3         3   8.8e+03      72      96 ..     176     200 ..     172     206 .. 0.66
   2 ?   10.6   0.4   0.00011      0.34     118     164 ..     423     469 ..     414     483 .. 0.90
   3 ?   -2.1   0.1      0.93   2.8e+03      92     122 ..     494     524 ..     471     538 .. 0.51

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 3
      DUF745  72 reaeavvqeekkslqsseanakaaa 96 
                 +ea +++++  +s + +++n++a++
  EPX73214.1 176 AEAFQILNQGMNSRAVASTNMNATS 200
                 5666777777777777777777665 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00011
      DUF745 118 enlenaeqvaagaqqelaektqlleaAkkRveeLkkqlkearkdlek 164
                 +++e +eq+ a aq+el+++  ll + ++++  L+  l +a+k + +
  EPX73214.1 423 SKAEAVEQLYARAQTELKDRDGLLSSTRQQLSYLMDALGDAHKRYVE 469
                 567899********************************999988765 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 0.93
      DUF745  92 akaaakaakqaqqqlealkallkaakenlen 122
                  +++++  +q++q+ e l + l a+ ++l++
  EPX73214.1 494 SSVVKHDEDQVNQERELLLQKLSAMDTSLTS 524
                 3333333444444444455555555554444 PP

>> DUF87  Helicase HerA, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.3    0.0036        11      29      40 ..      83      94 ..      80      95 .. 0.90
   2 ?    2.1   0.0     0.057   1.7e+02      77     151 ..     116     187 ..     108     301 .. 0.73
   3 ?    0.6   0.8      0.17     5e+02     115     218 ..     426     525 ..     377     540 .. 0.57

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0036
       DUF87 29 lgsTGsGKSntv 40
                 g+TGsGK++t+
  EPX73214.1 83 YGQTGSGKTYTM 94
                59*********8 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.057
       DUF87  77 kvitpspsakdkelkinpwsldpeelldlleeddkpaaavqrsvleealdqakakeekeklssdepveklleelk 151
                 + i+ sps+ ++e+k+ + ++ +e + dll  d+++++  + ++   +++ +k    +   s +e ++ l++ ++
  EPX73214.1 116 DKIRSSPSTTEYEVKVSYMEIYMEKIRDLLSPDNDHLTVHENKLQGVYVEGLK---TVYVSSEAEAFQILNQGMN 187
                 56777888899999***************999777777666666666666665...3333333333333333333 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.17
       DUF87 115 avqrsvleealdqakakeekeklssdepveklleelkkekeelrklknqaiarlldkledllrkggsf..snsstdliallleklekegkitiidlsgv 211
                 ++ ++++++a +++k +++    s+++ + +l + l        +++     + ++++ed+  + ++    +++++++++ +++ ++e+++    ls +
  EPX73214.1 426 EAVEQLYARAQTELK-DRDGLLSSTRQQLSYLMDALG-----DAHKRYVELVQNHRRKEDMGATSQTSstVETPSSVVKHDEDQVNQERELLLQKLSAM 518
                 444455555555555.233333334444444444444.....222222222222222333322222222335555555555555566665555555555 PP

       DUF87 212 delaqql 218
                 d + + l
  EPX73214.1 519 DTSLTSL 525
                 5555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (555 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       772  (0.0430587); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.69u 0.34s 00:00:01.03 Elapsed: 00:00:00.54
# Mc/sec: 3100.88
//
Query:       EPX73215.1  [L=1591]
Description: histidine kinase Mak1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.7e-21   74.2   0.1    3.8e-19   68.9   0.0    2.6  2  Response_reg  Response regulator receiver domain
      2e-19   70.1   0.0    4.6e-19   69.0   0.0    1.6  1  HATPase_c     Histidine kinase-, DNA gyrase B-, and HSP90-lik
    1.9e-15   56.8   0.0    2.5e-09   37.1   0.0    2.6  2  PAS           PAS fold
    5.9e-15   55.1   0.1    1.4e-14   53.9   0.1    1.7  1  HisKA         His Kinase A (phospho-acceptor) domain
    1.2e-13   51.2   0.0    2.4e-06   27.7   0.0    2.7  2  PAS_3         PAS fold
    1.1e-12   48.1   0.0    3.2e-07   30.5   0.0    2.7  2  PAS_9         PAS domain
    1.4e-11   44.6   0.0    2.5e-08   34.2   0.0    2.4  2  PAS_4         PAS fold
    3.7e-09   36.4   0.0    0.00031   20.7   0.0    2.8  2  PAS_8         PAS domain


Domain annotation for each model (and alignments):
>> Response_reg  Response regulator receiver domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0     0.071   1.6e+02      11      89 ..    1312    1395 ..    1308    1403 .. 0.68
   2 !   68.9   0.0   1.7e-22   3.8e-19       1     111 [.    1465    1582 ..    1465    1583 .. 0.95

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.071
                    HHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHESEEEEES..SCSS.SEHHHHHHHHHHCT..TTSEEEEEESSTSHHHHHHH CS
  Response_reg   11 rellrqlleeegyeevaeaedgkealellkeekvdlillDi..nmpg.mdGlellkeireed..pelpviiltahseeedavea 89  
                    ++ +++ll+e+ ++++ +++d+++a+ +l e  ++  +  i  n+++  d + +++ +++    ++++ i++ ++++++ + e+
    EPX73215.1 1312 VNFVQTLLDEKTLKDIVSFKDPTKAYSQLVETPIQSNVSHIvlNLSRnEDYISFIRSLQQCAsyESTKFIVIVSTKQKAALSEV 1395
                    6778999**********************7777444443331144444677888888877666656666666555555555554 PP

  == domain 2  score: 68.9 bits;  conditional E-value: 1.7e-22
                    EEEESSSHHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHH...ESEEEEESSCSSSEHHHHHHHHHHCT.....TTSEEEEEESSTSHHHHH CS
  Response_reg    1 vlivdDdplvrellrqlleeegyeevaeaedgkealellkeek...vdlillDinmpgmdGlellkeireed.....pelpviiltahseeedav 87  
                    vl+++D+ +++++++++le+ g+ e +++ +g e+le +k+++   + lil+D++mp mdG++++ eir+++     + + +++l+a++ + +a 
    EPX73215.1 1465 VLLAEDNIINIKVISRFLEKMGV-EYDVVMNGLECLEEWKQKDigyYWLILMDLQMPVMDGYQACIEIRKHElqgglEPTSIVALSANALSHVAA 1558
                    89*********************.*******************88888************************7776666**************** PP

                    HHHHCTESEEEESSG-HHHHHHHH CS
  Response_reg   88 ealkagaddflsKpfdpeeLlkal 111 
                    ++ ++g d +lsKp++ ++L++ +
    EPX73215.1 1559 NCEECGFDTYLSKPITLKHLVSVV 1582
                    ******************999865 PP

>> HATPase_c  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.0   0.0     2e-22   4.6e-19       1     110 [.    1061    1176 ..    1061    1178 .. 0.84

  Alignments for each domain:
  == domain 1  score: 69.0 bits;  conditional E-value: 2e-22
                  EHHHHHHHHHHHHHHHHHHHHSTTTEEEEEEEE.....EE..TEEEEEEEESSSSSTTHHHTGTCSTTCH.HCSTCHTSTSSSHHHHHHHHHHHHTT CS
   HATPase_c    1 gdekrLrqiisnlvdNavkfatkageieveika.....se..ddlvisveDnGiGipkedlkklfekfsq.ddstkrggggtGlGlsivkklvelmg 89  
                  gd  r+rq+  n+++Na+kf t++ge+   +++     +e  + l+ +  D+G+G +  d+ ++f++fsq ++s++r++ g+GlGl i+++l+el+g
  EPX73215.1 1061 GDRNRIRQVALNVISNAIKF-TDTGEVITLCSVlkwlnTEqsVVLKWECIDTGPGFDSVDQSRIFKPFSQiEASDARKQ-GSGLGLVISRELAELHG 1155
                  7999****************.77776633333344454123578888***********************877777775.***************** PP

                  TEEEEEEETTTEEEEEEEEES CS
   HATPase_c   90 GeiwvesepgrGttftftlpl 110 
                  Ge++++s +g Gt f+ t+++
  EPX73215.1 1156 GEMKCRSIKGVGTHFIWTAKF 1176
                  ***************988876 PP

>> PAS  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.1   0.0   1.1e-12   2.5e-09       3     113 .]     683     792 ..     681     792 .. 0.95
   2 !   17.1   0.0   1.9e-06    0.0041       2      96 ..     814     908 ..     813     926 .. 0.79

  Alignments for each domain:
  == domain 1  score: 37.1 bits;  conditional E-value: 1.1e-12
                 HHHHHHHSSSEEEEEE.TTSBEEEECHHHHHHHSSTHHHCTTSBGGGGBSTTHHHHHHHHHHHHHHHTT-ECCCCEEEECTTSSEEEEEEEEEEEEETT CS
         PAS   3 lraileslpdpifvvD.edgrilyvNaaaeellGlsreevlgkslldliheeddaelaelleqlleqgeesrageisfklrdgrpihlevraspvrdag 100
                 l++i++s+p+ +f+ D  dg i ++N  +   +Gls +e+l k ++  ih +d  +   + +++ +++ e  ++ei++ + dg ++ +  ra+p++d +
  EPX73215.1 683 LKSIIDSIPVHVFIADpSDGTIAWANGRMLLYCGLSLDELLEKQFN-CIHSNDF-KSFMKGWKQFLSSAEVFTKEIRLQRFDGIYRFFIFRAVPMLDCS 779
                 789*******************************************.8888876.58888999************************************ PP

                 EEEEEEEEEEEES CS
         PAS 101 geilgflgvlrdi 113
                 g il+++g++ d+
  EPX73215.1 780 GSILHIFGTMTDV 792
                 **********997 PP

  == domain 2  score: 17.1 bits;  conditional E-value: 1.9e-06
                 HHHHHHHHSSSEEEEEETTSBEEEECHHHHHHHSSTHHHCTTSBGGGGBSTTHHHHHHHHHHHHHHHTT-ECCCCEEEEC......TTSSEEEEEEEEE CS
         PAS   2 dlraileslpdpifvvDedgrilyvNaaaeellGlsreevlgkslldliheeddaelaelleqlleqgeesrageisfkl......rdgrpihlevras 94 
                  +r++ e++p  +f+   +  i+y+Na + +  Gls e  lg  +l  +h++d+       ++ll ++ ++++++ +         +dg++++ +v  +
  EPX73215.1 814 NYRSLAEASPQIVFAASTKNGIIYANAQWLSYSGLSFENSLGLCYLSAVHPDDR------AKCLLPNSGNGSDVDNTYVAeirfrsTDGCYRWHLVKSV 906
                 6999**********************************************9964......555666666666665555555556668888888777766 PP

                 EE CS
         PAS  95 pv 96 
                  v
  EPX73215.1 907 CV 908
                 55 PP

>> HisKA  His Kinase A (phospho-acceptor) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.9   0.1   6.2e-18   1.4e-14       3      67 .]     951    1014 ..     949    1014 .. 0.94

  Alignments for each domain:
  == domain 1  score: 53.9 bits;  conditional E-value: 6.2e-18
                  HHHHHHHHHHHHHHHHHHHHHHHHHHC..T-HSSCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH CS
       HisKA    3 grflagvaHELrtPLsailgnaeaLkregklteelkeyletiesearrldhlvedlLdlsrieag 67  
                   + l++++HE+rtPL +i g+++ L ++ +l+ e+ +y ++i+++a+ l+++++++Ldls+  ag
  EPX73215.1  951 MQYLSNMSHEIRTPLIGITGMVSFLLET-ELSSEQTDYARVIQQSAESLLAVINEILDLSKVRAG 1014
                  5779********************9885.8*******************************8876 PP

>> PAS_3  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   0.0   1.1e-09   2.4e-06       3      89 .]     706     789 ..     704     789 .. 0.95
   2 !   20.8   0.0   1.6e-07   0.00036       1      75 [.     835     908 ..     835     923 .. 0.84

  Alignments for each domain:
  == domain 1  score: 27.7 bits;  conditional E-value: 1.1e-09
       PAS_3   3 yvserveeilGyspeellgkveswldlvhpeDrervrealqealkkgepyegeyRirrkdGeyrwveararvirdengkpvrvigva 89 
                  +++r+  + G+s +ell+k     +++h  D + +++ +++ l++ e+++ e+R++r dG yr +  ra+++ d +g ++++ g++
  EPX73215.1 706 WANGRMLLYCGLSLDELLEK---QFNCIHSNDFKSFMKGWKQFLSSAEVFTKEIRLQRFDGIYRFFIFRAVPMLDCSGSILHIFGTM 789
                 579999**************...799*******************************************************999985 PP

  == domain 2  score: 20.8 bits;  conditional E-value: 1.6e-07
       PAS_3   1 iiyvserveeilGyspeellgkveswldlvhpeDrervrealqealkkge.pyegeyRirrkdGeyrwveararvi 75 
                 iiy+++++  + G+s e  lg    +l++vhp+Dr+++        ++    y  e+R+r  dG yrw   + + +
  EPX73215.1 835 IIYANAQWLSYSGLSFENSLGL--CYLSAVHPDDRAKCLLPNSGNGSDVDnTYVAEIRFRSTDGCYRWHLVKSVCV 908
                 69********************..**********999877666555555559****************88887777 PP

>> PAS_9  PAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.5   0.0   1.4e-10   3.2e-07       2     104 .]     692     794 ..     691     794 .. 0.86
   2 !   14.9   0.0   1.1e-05     0.024       7     103 ..     830     927 ..     823     928 .. 0.87

  Alignments for each domain:
  == domain 1  score: 30.5 bits;  conditional E-value: 1.4e-10
       PAS_9   2 dgili.dnpdgrilyaNeaalrllGyspeevlgksitdlf.vtdpeanerlraaleqgrkkerevevvlirkngetfwvlltaspvkdddgelvgiivi 98 
                 + ++i d +dg+i +aN  +l   G s +e+l k++ ++   + ++  +  +++l + +  ++++e+ l+r +g + ++ ++a+p+ d +g + +i ++
  EPX73215.1 692 VHVFIaDPSDGTIAWANGRMLLYCGLSLDELLEKQFNCIHsNDFKSFMKGWKQFLSSAE--VFTKEIRLQRFDGIYRFFIFRAVPMLDCSGSILHIFGT 788
                 67888899***999*********************999994444444555555555555..************************************** PP

       PAS_9  99 lrDite 104
                 ++D+ e
  EPX73215.1 789 MTDVHE 794
                 ***976 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 1.1e-05
       PAS_9   7 dnpdgrilyaNeaalrllGyspeevlgksitdlfvtdpeanerlraaleqgrk..kerevevvlirkngetfwvlltaspvkdd.dgelvgiivilrDi 102
                  +++g i+yaN ++l   G s+e  lg  +   + +++++++ l     +g++  + +  e+ ++  +g + w l++ + v ++ d +  +++++++Di
  EPX73215.1 830 STKNG-IIYANAQWLSYSGLSFENSLGLCYLSAV-HPDDRAKCLLPNSGNGSDvdNTYVAEIRFRSTDGCYRWHLVKSVCVNNSaDYNSNLWLGTCTDI 926
                 56899.*********************7766666.8888888888888888889*********************9999997777999999*******9 PP

       PAS_9 103 t 103
                  
  EPX73215.1 927 H 927
                 6 PP

>> PAS_4  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   0.0   1.1e-11   2.5e-08       2     109 ..     688     796 ..     687     797 .. 0.96
   2 !    8.0   0.0    0.0015       3.3       2      49 ..     820     867 ..     819     871 .. 0.87

  Alignments for each domain:
  == domain 1  score: 34.2 bits;  conditional E-value: 1.1e-11
       PAS_4   2 dslpdalavldp.dgrvlyaNaaaaelfgappeellGktlaellpeedaarleralrrvlegeepiefleelll.pgeerhyelrllPlrdesGevigv 98 
                 ds+p+ +++ dp dg++ +aN ++  + g++ +ell k +  +++  d   ++  +++ l++ e+ + ++ l + +g  r++ +r++P++d sG ++++
  EPX73215.1 688 DSIPVHVFIADPsDGTIAWANGRMLLYCGLSLDELLEKQFNCIHSN-DFKSFMKGWKQFLSSAEVFTKEIRLQRfDGIYRFFIFRAVPMLDCSGSILHI 785
                 89999999997549***************************99998.**************************************************** PP

       PAS_4  99 lvisrDiTerr 109
                 +++++D+ e++
  EPX73215.1 786 FGTMTDVHEQK 796
                 *******9986 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0015
       PAS_4   2 dslpdalavldpdgrvlyaNaaaaelfgappeellGktlae.llpeeda 49 
                 +++p+++++ ++   ++yaNa++ ++ g+++e  lG ++ + ++p+ d+
  EPX73215.1 820 EASPQIVFAASTKNGIIYANAQWLSYSGLSFENSLGLCYLSaVHPD-DR 867
                 789***********************************99615554.54 PP

>> PAS_8  PAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   1.4e-07   0.00031       2      63 ..     682     746 ..     681     751 .. 0.83
   2 !   12.7   0.0   4.4e-05     0.098       3      46 ..     815     856 ..     813     874 .. 0.76

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 1.4e-07
       PAS_8   2 rlralfesspdgiavvd..lgdrivdvNqaalellGys.adlkgellg.qllpvlrplledaeqll 63 
                  l+++++s+p+ ++++d  +g +i ++N ++l  +G+s ++l+++ +  +  +++++ +  ++q+l
  EPX73215.1 682 LLKSIIDSIPVHVFIADpsDG-TIAWANGRMLLYCGLSlDELLEKQFNcIHSNDFKSFMKGWKQFL 746
                 689**************9555.5***************9999999996677777777777776666 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 4.4e-05
       PAS_8   3 lralfesspdgiavvd.lgdrivdvNqaalellGysadlkgellg 46 
                 +r+l e+sp+ ++ +   ++ i+++N ++l   G+s  +  +l  
  EPX73215.1 815 YRSLAEASPQIVFAAStKNG-IIYANAQWLSYSGLS--FENSLGL 856
                 9************8765557.*************99..5555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1591 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       865  (0.0482459); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 1.01u 0.30s 00:00:01.31 Elapsed: 00:00:00.53
# Mc/sec: 9058.34
//
Query:       EPX73216.1  [L=793]
Description: secretory pathway protein Sec18 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-51  174.2   0.2      6e-40  136.7   0.0    2.7  2  AAA              ATPase family associated with various cellul
    1.1e-10   41.1   0.1    9.4e-10   38.1   0.0    2.5  2  CDC48_2          Cell division protein 48 (CDC48), domain 2
    4.4e-09   36.0   0.1    1.4e-08   34.4   0.0    1.9  1  AAA_lid_3        AAA+ lid domain
    5.7e-09   36.4   0.1    9.8e-05   22.6   0.0    3.7  3  AAA_22           AAA domain
    5.4e-08   32.4   0.0     0.0029   16.9   0.0    2.3  2  TIP49            TIP49 P-loop domain
    6.1e-08   33.0   0.3      2e-06   28.0   0.0    3.0  2  AAA_2            AAA domain (Cdc48 subfamily)
    2.3e-07   31.3   0.4     0.0054   17.1   0.0    2.8  2  AAA_16           AAA ATPase domain
    6.4e-07   29.5   0.3       0.15   11.9   0.0    4.2  4  ATPase_2         ATPase domain predominantly from Archaea
    2.1e-06   27.6   0.1      0.029   14.1   0.0    3.5  3  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    2.3e-05   24.9   0.0     0.0077   16.8   0.0    2.8  2  AAA_18           AAA domain
    3.1e-05   24.0   0.0        0.4   10.7   0.0    2.6  2  AAA_14           AAA domain
    3.6e-05   23.8   0.0       0.16   12.0   0.0    2.4  2  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
    5.4e-05   23.2   0.1     0.0013   18.7   0.0    2.9  2  AAA_5            AAA domain (dynein-related subfamily)
    0.00033   20.1   0.2     0.0081   15.6   0.0    2.3  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
    0.00069   19.4   0.1       0.52   10.0   0.0    2.8  2  Sigma54_activat  Sigma-54 interaction domain
    0.00084   19.1   0.1       0.03   14.0   0.0    2.7  2  AAA_24           AAA domain
    0.00091   19.4   0.0     0.0024   18.0   0.0    1.6  1  CDC48_N          Cell division protein 48 (CDC48), N-terminal
     0.0011   19.1   0.0        0.1   12.7   0.0    2.5  2  AAA_33           AAA domain
     0.0017   17.9   0.1      0.048   13.2   0.0    2.3  2  AAA_7            P-loop containing dynein motor region
     0.0061   16.2   0.2        2.5    7.6   0.0    3.4  3  AAA_25           AAA domain
     0.0077   16.6   0.0      0.072   13.5   0.0    2.4  2  RNA_helicase     RNA helicase
     0.0093   15.7   0.1       0.29   10.8   0.0    2.6  2  IstB_IS21        IstB-like ATP binding protein
  ------ inclusion threshold ------
      0.014   15.9   1.5      0.041   14.4   0.1    2.4  2  ABC_tran         ABC transporter
      0.019   14.1   0.3        5.3    6.0   0.0    2.3  2  T2SSE            Type II/IV secretion system protein
      0.019   14.3   1.8      0.044   13.1   0.1    2.3  2  ATPase           KaiC
      0.033   13.6   0.0        4.8    6.6   0.0    2.4  2  PhoH             PhoH-like protein
      0.047   13.1   1.2         13    5.2   0.0    3.3  2  TniB             Bacterial TniB protein
       0.05   13.9   0.0       0.56   10.4   0.0    2.1  2  AAA_28           AAA domain
      0.066   13.0   0.0       0.16   11.8   0.0    1.6  1  AAA_11           AAA domain
      0.096   12.4   0.2       0.62    9.8   0.0    2.3  2  AAA_30           AAA domain
        0.1   12.5   0.0        0.3   10.9   0.0    1.8  1  AAA_3            ATPase family associated with various cellul
       0.11   12.9   0.1       0.46   10.8   0.0    2.0  1  AAA_19           AAA domain
       0.17   11.1   0.1         13    5.0   0.0    2.4  2  Zeta_toxin       Zeta toxin
       0.19   11.5   0.3         12    5.7   0.0    2.5  2  AAA_29           P-loop containing region of AAA domain
        0.2   10.7   0.0        2.6    7.1   0.0    2.1  2  Parvo_NS1        Parvovirus non-structural protein NS1
       0.24   11.3   2.4        7.8    6.4   0.0    3.5  4  NACHT            NACHT domain


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.7   0.0   1.2e-42     6e-40       1     131 [.     308     448 ..     308     449 .. 0.94
   2 !   34.8   0.0   3.7e-11   1.8e-08       1     127 [.     589     714 ..     589     719 .. 0.80

  Alignments for each domain:
  == domain 1  score: 136.7 bits;  conditional E-value: 1.2e-42
                 EEEESSTTSSHHHHHHHHHHHHT.HEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTS.......TSEEEEEETGGGHHHHH..TTCCCHHHHHHHHHH CS
         AAA   1 vllyGppGtGKTllakavakelg.vefleisgsellskyvgesekkirelfkeakeka.......kpsilfiDEidalaksr..sgseseeeervvnqL 89 
                 +llyGppGtGKTl+a+++ k l+ +e   ++g+e+l+kyvg+se+++r+lf++a+++        + +i+++DE+da++k+r  sg++++++++vvnqL
  EPX73216.1 308 ILLYGPPGTGKTLVARQIGKMLNaREPKIVNGPEILNKYVGQSEENVRKLFADAEREYrergeesGLHIIIFDELDAICKKRgsSGGDTGVGDQVVNQL 406
                 69********************956789**************************7766788898667****************9999************ PP

                 HHHHHHTTTSSSTEEEEEEESSGGGSTHHHHS.TTSSEEEETT CS
         AAA  90 lteldgvkkkeskvivigatnrpdkldpallr.gRfdrkieie 131
                 l+++dgv++  ++++vig+tnr d++d+al+r gR+++++ei+
  EPX73216.1 407 LAKMDGVDQL-NNILVIGMTNRKDMIDEALVRpGRLEVHVEIS 448
                 *********7.66***************************997 PP

  == domain 2  score: 34.8 bits;  conditional E-value: 3.7e-11
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCS.SSSTTHHHHHHHHHHHHHHHTSTS.EEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTT CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsell.skyvgesekkirelfkeakekakp.silfiDEidalaksrsgseseeeervvnqLlteldgvk 97 
                 vll+Gp   GKT+la  +a  ++++f+++  +e +  +   ++ + ++++f++  ++  p s++++DEi++l+        +++++++++L+  ++++ 
  EPX73216.1 589 VLLSGPIASGKTALAATIALGSDFPFIKLVTAESMvGMSENARVSYVNGVFEDSYRS--PlSVIVVDEIERLIDWV-PIGPRFSNTLLQTLMVLFKKQP 684
                 79************************9998888774777777777788888875444..66***********9888.6678899999999999999999 PP

                 TSSSTEEEEEEESSGGGSTHHHHSTTSSEE CS
         AAA  98 kkeskvivigatnrpdkldpallrgRfdrk 127
                  k +++++++++ +  +l++  + + fd +
  EPX73216.1 685 PKGHRLLILATSSERTMLSRIDMTKSFDAE 714
                 988877777777777766655544556655 PP

>> CDC48_2  Cell division protein 48 (CDC48), domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.1   0.0   1.9e-12   9.4e-10       2      55 ..     163     236 ..     162     244 .. 0.82
   2 ?   -0.8   0.0       2.7   1.3e+03       2      24 ..     275     297 ..     274     297 .. 0.87

  Alignments for each domain:
  == domain 1  score: 38.1 bits;  conditional E-value: 1.9e-12
                 .SCCCCH.HHHCCCTTEEE-TTEEEEECCTCCCEEEEEEEECCCC...................SCEEECTSCC CS
     CDC48_2   2 idgdema.ylkrqFlgrpvtkGdlvvfefkgqeiklvVvstePkg...................pvgitetTei 55 
                 +dg+em+  + ++++++++++G+++vf+fk+ +ik++V+s++ ++                     + t +Tei
  EPX73216.1 163 LDGEEMSqLFANSYQNQVFAPGQKIVFDFKSFNIKATVRSISCVDlllsdspdqgintktdpdsRGILTAQTEI 236
                 89******************************************999888887666655555444455555555 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 2.7
                 .SCCCCHHHHCCCTTEEE-TTEE CS
     CDC48_2   2 idgdemaylkrqFlgrpvtkGdl 24 
                 +d+++ a ++r+F  r + +G++
  EPX73216.1 275 LDTEFSAIFRRAFALRLFPPGMI 297
                 6899899******9999999875 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.4   0.0   2.7e-11   1.4e-08       1      37 [.     475     511 ..     475     531 .. 0.88

  Alignments for each domain:
  == domain 1  score: 34.4 bits;  conditional E-value: 2.7e-11
   AAA_lid_3   1 dvdlkeLAerTeGySGADlaalcreAallAlrrgike 37 
                 dvdl eLA++T+++SGA++a l++ A+  A  r ik 
  EPX73216.1 475 DVDLMELASLTKNFSGAEIAGLIKSASSFAFYRHIKV 511
                 9***************************998887765 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.0     2e-07   9.8e-05       8      70 ..     308     371 ..     303     422 .. 0.79
   2 ?    2.1   0.0      0.44   2.2e+02       7      29 ..     588     610 ..     583     636 .. 0.81
   3 ?    6.8   0.0     0.015       7.5      92     118 ..     647     682 ..     624     702 .. 0.71

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 2e-07
      AAA_22   8 lvvtGesGtGKTtllrrlleqldeeakaee.erpevv.fvtlpsstsskdllrellralglelka 70 
                 ++++G++GtGKT+++r++ + l++++     ++pe++ ++  +s+++ ++l+ +  r++ +++++
  EPX73216.1 308 ILLYGPPGTGKTLVARQIGKMLNAREPK-IvNGPEILnKYVGQSEENVRKLFADAEREYRERGEE 371
                 799*******************755433.26999999999999999************9998887 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.44
      AAA_22   7 ilvvtGesGtGKTtllrrlleql 29 
                 ++++ G+  +GKT l+++++   
  EPX73216.1 588 SVLLSGPIASGKTALAATIALGS 610
                 57899***********9988765 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.015
      AAA_22  92 ielliiDEaqhlr.........seealeeLrsllnl 118
                  +++++DE+++l+         s+++l++L  l++ 
  EPX73216.1 647 LSVIVVDEIERLIdwvpigprfSNTLLQTLMVLFKK 682
                 47*********9878877654448888888777664 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.0   8.8e-05     0.044      50      97 ..     305     351 ..     289     369 .. 0.82
   2 !   16.9   0.0   5.7e-06    0.0029      38      87 ..     573     621 ..     539     632 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 8.8e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  50 GravLlaGpsgtGktalaiaiskelgedvpfvalsgsevyslevkkte 97 
                  +++Ll Gp+gtGkt +a  i k l++  p  +++g e+    v ++e
  EPX73216.1 305 VKGILLYGPPGTGKTLVARQIGKMLNAREP-KIVNGPEILNKYVGQSE 351
                 489***********************8877.56788888877776666 PP

  == domain 2  score: 16.9 bits;  conditional E-value: 5.7e-06
                 XXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  38 vivelikek.klaGravLlaGpsgtGktalaiaiskelgedvpfvalsgse 87 
                 ++v+ +k+  +    +vLl+Gp ++Gktala +i+  lg+d pf++l+++e
  EPX73216.1 573 LFVQQVKNSeRTRLMSVLLSGPIASGKTALAATIA--LGSDFPFIKLVTAE 621
                 5555665541344458****************997..9********99877 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   0.0   4.1e-09     2e-06       6     105 ..     308     412 ..     303     428 .. 0.76
   2 ?    1.5   0.0      0.56   2.8e+02       4      29 ..     587     612 ..     584     670 .. 0.52

  Alignments for each domain:
  == domain 1  score: 28.0 bits;  conditional E-value: 4.1e-09
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG---..----THHHHHHHHHT..TT-HHHHTTS..EEEEETGGG----.--------.-HHHH CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselle..eeevehlvsrligap..pgyvgaeegG..ivllDEidKihpk.essgadvS.regVq 96 
                 ill gp g+Gkt++a+++ ++l++   ++  +++  e+l     ++e+ v +l   +  ++  + ee+G  i+ +DE+d i++k +ssg d   ++ V+
  EPX73216.1 308 ILLYGPPGTGKTLVARQIGKMLNA---REPKIVNGPEILNkyVGQSEENVRKLFADAerEYRERGEESGlhIIIFDELDAICKKrGSSGGDTGvGDQVV 403
                 899*******************95...556666666666656356666677665443003444456666***************977777765378899 PP

                 HHHHHHHH- CS
       AAA_2  97 rdLLqileg 105
                 + LL  ++g
  EPX73216.1 404 NQLLAKMDG 412
                 999987776 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.56
                 --EEEE--TTSSHHHHHHHHHHHTT- CS
       AAA_2   4 isilllgptgvGktelakalaellfv 29 
                 +s+ll gp  +Gkt la ++a   + 
  EPX73216.1 587 MSVLLSGPIASGKTALAATIALGSDF 612
                 56777777777777777766654443 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   1.1e-05    0.0054      25      58 ..     306     339 ..     295     410 .. 0.76
   2 !   11.4   0.1   0.00064      0.32      20      45 ..     582     607 ..     572     659 .. 0.82

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 1.1e-05
      AAA_16  25 elvllsGesGvGKsslvrellralekdggiflrg 58 
                   +ll+G++G+GK+ ++r++ + l++++   ++g
  EPX73216.1 306 KGILLYGPPGTGKTLVARQIGKMLNAREPKIVNG 339
                 689*****************99888876555554 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00064
      AAA_16  20 rsgrpelvllsGesGvGKsslvrell 45 
                  + r  +vllsG+ ++GK++l+ +++
  EPX73216.1 582 ERTRLMSVLLSGPIASGKTALAATIA 607
                 4445589***************9876 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.036        18      23      44 ..     308     329 ..     301     338 .. 0.84
   2 ?    3.8   0.0     0.095        47      93     131 ..     345     386 ..     334     422 .. 0.83
   3 ?    3.1   0.0      0.15        75      22      40 ..     588     606 ..     576     612 .. 0.79
   4 !   11.9   0.0    0.0003      0.15     120     175 ..     648     706 ..     614     713 .. 0.79

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.036
    ATPase_2  23 yfiYGpegsGKtaLlkeiienl 44 
                 +++YGp g GKt + ++i + l
  EPX73216.1 308 ILLYGPPGTGKTLVARQIGKML 329
                 689*************997665 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.095
    ATPase_2  93 eilkeksklvfkaielllekikkkgkk...iiiiiDelqkli 131
                 + + +  ++v k ++++ ++ +++g +    iii+Del  + 
  EPX73216.1 345 KYVGQSEENVRKLFADAEREYRERGEEsglHIIIFDELDAIC 386
                 3444788899999999999999999999*99*******9886 PP

  == domain 3  score: 3.1 bits;  conditional E-value: 0.15
    ATPase_2  22 iyfiYGpegsGKtaLlkei 40 
                  +++ Gp+ sGKtaL   i
  EPX73216.1 588 SVLLSGPIASGKTALAATI 606
                 56778**********8766 PP

  == domain 4  score: 11.9 bits;  conditional E-value: 0.0003
    ATPase_2 120 iiiiiDelqklid...lglngaellvkeLlnliesltkekhlcvviclsSeglfiervy 175
                  +i++De+ +lid   +g + ++ l++ L+ l+++++ + h  +++++sSe  ++ r++
  EPX73216.1 648 SVIVVDEIERLIDwvpIGPRFSNTLLQTLMVLFKKQPPKGHRLLILATSSERTMLSRID 706
                 5899*******985556778899****************************99998876 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.0   5.9e-05     0.029      34      69 ..     306     342 ..     299     367 .. 0.87
   2 !    8.8   0.0    0.0026       1.3      20      59 ..     572     612 ..     559     663 .. 0.64
   3 ?   -0.9   0.0       2.4   1.2e+03      91     144 ..     721     776 ..     708     781 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 5.9e-05
      RuvB_N  34 dhvllyGpPGlGkttlakiiakelgvk.lkitsgPvl 69 
                   +llyGpPG Gkt +a+ i k l+++  ki  gP +
  EPX73216.1 306 KGILLYGPPGTGKTLVARQIGKMLNARePKIVNGPEI 342
                 568*******************999752688888876 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.0026
      RuvB_N  20 kifieaakkre.ealdhvllyGpPGlGkttlakiiakelgv 59 
                 k+f++  k+ e + l  vll+Gp   Gkt+la+ ia   + 
  EPX73216.1 572 KLFVQQVKNSErTRLMSVLLSGPIASGKTALAATIALGSDF 612
                 56777666554156889*****************9976554 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 2.4
      RuvB_N  91 deihrlsraveevlysamedfrldivig.kG.psarsikldlpkftlvgattragl 144
                  +i  l+r+++ + y a  ++r di+   +G ++++++ + ++k  l++ t+++ +
  EPX73216.1 721 GNIEELDRVLQSIDYFADTNVRADILQRlQGyTGTEKVDVGIAKILLIAETAKQDM 776
                 56777788888888999999999998542452567788999999999999988766 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   1.5e-05    0.0077       1      30 [.     308     356 ..     308     417 .. 0.72
   2 ?    5.2   0.0     0.061        30       1      38 [.     589     624 ..     589     646 .. 0.71

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 1.5e-05
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf...................gvnlrd 30 
                 Ill G+pG+GKt +a+ + k+l+                     +n+r+
  EPX73216.1 308 ILLYGPPGTGKTLVARQIGKMLNArepkivngpeilnkyvgqsEENVRK 356
                 99*******************9556777666655555554444333333 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.061
      AAA_18   1 IlltGtpGvGKttlakeLskrlgfgvnlrdvakengll 38 
                 +ll+G++++GKt la  ++   g+ +  +++++ + ++
  EPX73216.1 589 VLLSGPIASGKTALAATIAL--GSDFPFIKLVTAESMV 624
                 799***********988732..3355555555555555 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.0   0.00079       0.4       5      75 ..     308     384 ..     305     423 .. 0.81
   2 !   10.3   0.0    0.0011      0.52       5     107 ..     589     704 ..     587     715 .. 0.60

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00079
      AAA_14   5 lvitGaRrvGKTtllkqlikell......vkkesilyinldderdkkladpekllelileklkeekktylflDEiqe 75 
                 +++ G+  +GKT +++q+ k l       v+  +il   + + ++  ++ +++ +++++e+ +e++ +++++DE   
  EPX73216.1 308 ILLYGPPGTGKTLVARQIGKMLNarepkiVNGPEILNKYVGQSEENVRKLFADAEREYRERGEESGLHIIIFDELDA 384
                 7899**************998887777777777777666666666556667788999999855569999*****865 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.0011
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyinldderd....kkladpe.kllelilek.lkeekktylflDEiqev...........pewekalksl 86 
                 ++++G+  +GKT l+ +++  l    +++ +i+l + +     +  ++ + ++ + ++e  ++ +  ++++ DEi ++           +++ ++l  l
  EPX73216.1 589 VLLSGPIASGKTALAATIA--LG---SDFPFIKLVTAESmvgmS--ENARvSYVNGVFEDsYR-SPLSVIVVDEIERLidwvpigprfsNTLLQTLMVL 679
                 7899***********9998..44...567777777766643331..22223345555555244.47889*********555555544443333333333 PP

      AAA_14  87 vd....egknldvivtGSnskllsk 107
                 ++    +g++l +++t S   +ls+
  EPX73216.1 680 FKkqppKGHRLLILATSSERTMLSR 704
                 3333333355666666666666665 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   0.0   0.00032      0.16      19      61 ..     305     348 ..     285     376 .. 0.79
   2 !    9.2   0.0    0.0023       1.1      16      42 ..     576     609 ..     560     619 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00032
                 TEEEEEEESTTSSHHHHHHHHHHHTT--...----TTTTSEEEEEE CS
        TsaE  19 gdvilLeGdLGaGKTtlvrglakalgve...evkSPTFtlveeYel 61 
                  + ilL+G+ G+GKT  +r++ k l+ +    v+ P   ++++Y  
  EPX73216.1 305 VKGILLYGPPGTGKTLVARQIGKMLNARepkIVNGP--EILNKYVG 348
                 3459*********************99666447777..56676655 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.0023
                 HCH...TEE.....EEEEESTTSSHHHHHHHHHHH CS
        TsaE  16 kal...gdv.....ilLeGdLGaGKTtlvrglaka 42 
                 +++   +       +lL+G++ +GKT+l+  +a +
  EPX73216.1 576 QQVknsE-RtrlmsVLLSGPIASGKTALAATIALG 609
                 4333221.034456**************9998865 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   2.7e-06    0.0013       2      31 ..     308     338 ..     307     385 .. 0.87
   2 ?    1.2   0.0      0.68   3.4e+02       2      76 ..     589     657 ..     588     662 .. 0.56

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 2.7e-06
                 EEEE--SSSSHHHHHHHGGGGB.S--EEEEE CS
       AAA_5   2 vlLvGppGtgKselaerlaaal.nreveyvq 31 
                 +lL GppGtgK+ +a+++ ++l  re  +v+
  EPX73216.1 308 ILLYGPPGTGKTLVARQIGKMLnAREPKIVN 338
                 89********************656666655 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.68
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------.G-SEEEEESGGG CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar.egeilvlDEver 76 
                 vlL Gp  +gK+ la  +a  l++ +  +   +  t+e ++g  e  n + s+v++++ ++ r   +++v+DE+er
  EPX73216.1 589 VLLSGPIASGKTALAATIA--LGSDFPFI---KLVTAESMVGMSE--NARVSYVNGVFEDSYRsPLSVIVVDEIER 657
                 6777777777777777665..22222111...1133455555555..56666777777777773346777777776 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   1.6e-05    0.0081      24      49 ..     307     332 ..     299     354 .. 0.87
   2 ?    2.0   0.0      0.23   1.2e+02      24      42 ..     588     606 ..     586     634 .. 0.91

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 1.6e-05
  Mg_chelatase  24 nlllvGppGsGKtmlakrlpsllppl 49 
                    +ll+GppG+GKt++a+++ ++l + 
    EPX73216.1 307 GILLYGPPGTGKTLVARQIGKMLNAR 332
                   589****************9999765 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.23
  Mg_chelatase  24 nlllvGppGsGKtmlakrl 42 
                   ++ll Gp  sGKt la+ +
    EPX73216.1 588 SVLLSGPIASGKTALAATI 606
                   689*************876 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.0     0.001      0.52      24      50 ..     307     333 ..     296     342 .. 0.80
   2 ?    6.1   0.0     0.016       8.2      12      79 ..     575     640 ..     567     648 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.001
                      -EEEECSTTSSHHHHHHHHHHHSTTTT CS
  Sigma54_activat  24 svlitGesGtGKellaraiheaskrke 50 
                       +l+ G  GtGK+l+ar+i +  + +e
       EPX73216.1 307 GILLYGPPGTGKTLVARQIGKMLNARE 333
                      58****************988666555 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.016
                      HHHHHHHCTSS.S-EEEECSTTSSHHHHHHHHHHHSTTTTS-EEEEETTTS-TTCHHHHHHEBSSSSST CS
  Sigma54_activat  12 leqikkvaktd.lsvlitGesGtGKellaraiheaskrkekpfvavncaaipeelleseLFGhekGaFt 79 
                      ++q+k+  +t+ +svl+ G   +GK+ la +i   s+    pf+++  a+    + e     +++G F 
       EPX73216.1 575 VQQVKNSERTRlMSVLLSGPIASGKTALAATIALGSD---FPFIKLVTAESMVGMSENARVSYVNGVFE 640
                      67788888777799****************9976654...67777777776666666666666666665 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.0   6.1e-05      0.03       5      27 ..     308     329 ..     305     390 .. 0.69
   2 ?    1.9   0.1      0.32   1.6e+02       4      29 ..     588     615 ..     586     662 .. 0.65

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 6.1e-05
      AAA_24   5 iliyGpsgiGKTtlakelgpkpl 27 
                 il+yGp+g+GKT +a+++  k l
  EPX73216.1 308 ILLYGPPGTGKTLVARQI-GKML 329
                 89***************9.4433 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.32
      AAA_24   4 kiliyGpsgiGKTtlakel..gpkplfi 29 
                 ++l+ Gp  +GKT la+++  g ++ fi
  EPX73216.1 588 SVLLSGPIASGKTALAATIalGSDFPFI 615
                 6889999999999999998776665555 PP

>> CDC48_N  Cell division protein 48 (CDC48), N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   4.9e-06    0.0024       3      83 ..      61     132 ..      60     134 .. 0.92

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 4.9e-06
                 EEECCS.S-CSSTTEEEE-HHHHHHHTS-TTSEEEEECCCCEEEEEEEBSTTST.TTTEEEE-HHHHHHHT--TTEEEEEEEE CS
     CDC48_N   3 rVaeap.qedvgrgivridpedmeelglepgdvveiegkrkTvaivwpaepede.gkgiIrmdgvtRknagvsiGdkVtVrka 83 
                 r+ +a   ed+ +++++++p d++e      +++ + + r     v++ +p     +g+   +++ R++a +s++++V V ++
  EPX73216.1  61 RIVKATsTEDALTNCIIVSPMDFRE------QYIIVDNLR-----VFSTKPVPGfPQGCLGASQPHREWASWSLNQQVNVASY 132
                 56677779*****************......899999888.....*******999*************************987 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   0.0   0.00021       0.1       2      46 ..     308     355 ..     308     396 .. 0.79
   2 ?    3.7   0.0      0.13        65       2      20 ..     589     607 ..     589     644 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 0.00021
      AAA_33   2 vllvGlpGsGKstlaerllkklg...avllssdtlrrrlfgtdqqskt 46 
                 +ll G+pG+GK+ +a+++ k l      +++ ++++++++g+ +++ +
  EPX73216.1 308 ILLYGPPGTGKTLVARQIGKMLNarePKIVNGPEILNKYVGQSEENVR 355
                 6789*************9777766669999999999999885444433 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.13
      AAA_33   2 vllvGlpGsGKstlaerll 20 
                 vll G+ +sGK+ la  ++
  EPX73216.1 589 VLLSGPIASGKTALAATIA 607
                 6899**********99876 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.0   9.7e-05     0.048      28      60 ..     300     332 ..     295     339 .. 0.83
   2 ?    2.1   0.0      0.25   1.2e+02      34      52 ..     587     605 ..     575     619 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 9.7e-05
       AAA_7  28 lllknkkpvllvGptGtGKtviikdllkkldke 60 
                 l +++ k +ll+Gp GtGKt++++++ k l+ +
  EPX73216.1 300 LGISHVKGILLYGPPGTGKTLVARQIGKMLNAR 332
                 55789999*****************99888855 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.25
       AAA_7  34 kpvllvGptGtGKtviikd 52 
                 ++vll Gp  +GKt+++ +
  EPX73216.1 587 MSVLLSGPIASGKTALAAT 605
                 579************9877 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.0    0.0051       2.5      36      52 ..     308     324 ..     302     328 .. 0.89
   2 ?    1.2   0.0      0.47   2.3e+02     132     172 ..     364     406 ..     344     414 .. 0.68
   3 ?    2.6   0.0      0.18        87      36      55 ..     589     608 ..     585     657 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0051
      AAA_25  36 allaGapgtGKttlald 52 
                 +ll+G+pgtGKt +a +
  EPX73216.1 308 ILLYGPPGTGKTLVARQ 324
                 69***********9866 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.47
      AAA_25 132 aleaaieevegvrlvviDplsralgg..densnsdv.galveal 172
                 + +++ ee  g++ +++D l++++    ++  ++ v +++v++l
  EPX73216.1 364 EYRERGEE-SGLHIIIFDELDAICKKrgSSGGDTGVgDQVVNQL 406
                 33333444.56***********9988445555555689999887 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.18
      AAA_25  36 allaGapgtGKttlaldlal 55 
                 +ll G+ ++GKt+la  +al
  EPX73216.1 589 VLLSGPIASGKTALAATIAL 608
                 7999********98876665 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.0   0.00014     0.072       1      25 [.     308     332 ..     308     371 .. 0.74
   2 ?   -0.2   0.0       2.5   1.3e+03       1      19 [.     589     607 ..     589     657 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 0.00014
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkk 25 
                   i+lyGp+g+GK+++a+++ k l  +
    EPX73216.1 308 ILLYGPPGTGKTLVARQIGKMLNAR 332
                   789**************87777633 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 2.5
  RNA_helicase   1 iwlyGpsgeGKStlakeLa 19 
                   ++l+Gp   GK+ la ++a
    EPX73216.1 589 VLLSGPIASGKTALAATIA 607
                   578999999****999854 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.0   0.00059      0.29      46      71 ..     304     329 ..     296     338 .. 0.83
   2 ?    1.7   0.0      0.39   1.9e+02      49      69 ..     588     608 ..     575     655 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00059
   IstB_IS21  46 kkenivllGpsGvGKshlaialgvea 71 
                 + ++i+l Gp+G+GK+ +a  +g+  
  EPX73216.1 304 HVKGILLYGPPGTGKTLVARQIGKML 329
                 56789**************9999765 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.39
   IstB_IS21  49 nivllGpsGvGKshlaialgv 69 
                 +++l Gp   GK+ la++++ 
  EPX73216.1 588 SVLLSGPIASGKTALAATIAL 608
                 68999**********987764 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.1   8.3e-05     0.041       7      99 ..     301     417 ..     299     432 .. 0.79
   2 ?   -1.8   0.2         8     4e+03      14      32 ..     589     607 ..     586     611 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 8.3e-05
                 EEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH.........................H CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........................x RF
    ABC_tran   7 klkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren.........................e 80 
                  +++ + + + G+ G+GK+ +++ + ++l+  e +i ++g ++ ++   +++++++ l+ +++  ++ + +e+                          
  EPX73216.1 301 GISHVKGILLYGPPGTGKTLVARQIGKMLNAREPKI-VNGPEILNKYVGQSEENVRKLFADAEREYRERGEESglhiiifdeldaickkrgssggdtgV 398
                 5677777899**************************.************************98888887776688888777777766666655555544 PP

                 HHTCHHHHHHHSTTGGTTC CS
                 xxxxxxxxxxxxxxxxxxx RF
    ABC_tran  81 sdeeiekalsklglkelkd 99 
                  d+ ++++l+k++ ++  +
  EPX73216.1 399 GDQVVNQLLAKMDGVDQLN 417
                 4444666666666665555 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 8
                 EEEEESTTSSHHHHHHHHT CS
                 xxxxxxxxxxxxxxxxxxx RF
    ABC_tran  14 vaivGenGaGKStLlklla 32 
                 v + G+  +GK+ L++++a
  EPX73216.1 589 VLLSGPIASGKTALAATIA 607
                 56789999*******9997 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0     0.011       5.3     128     161 ..     304     337 ..     295     339 .. 0.87
   2 ?    5.7   0.0     0.013       6.5     130     150 ..     587     607 ..     563     630 .. 0.77

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.011
       T2SSE 128 erglilvsGgTgsGKttllyallkeinksderiv 161
                 + + il+ G+ g+GKt ++  + k++n+++ +iv
  EPX73216.1 304 HVKGILLYGPPGTGKTLVARQIGKMLNAREPKIV 337
                 55679**********************9998887 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.013
       T2SSE 130 glilvsGgTgsGKttllyall 150
                 +++l+sG+  sGKt l+ ++ 
  EPX73216.1 587 MSVLLSGPIASGKTALAATIA 607
                 579***********9987654 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   8.8e-05     0.044       4      38 ..     271     324 ..     269     327 .. 0.82
   2 ?   -0.9   0.0       1.7   8.2e+02      20      38 ..     587     605 ..     578     631 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 8.8e-05
      ATPase   4 gIeglDeilk...................gGipegrvvlitGepGtGKtifalq 38 
                 gI glD+ ++                    Gi + + +l++G pGtGKt++a q
  EPX73216.1 271 GIGGLDTEFSaifrrafalrlfppgmiekLGISHVKGILLYGPPGTGKTLVARQ 324
                 677777777667777777777777777778********************9987 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 1.7
      ATPase  20 rvvlitGepGtGKtifalq 38 
                  +vl++G   +GKt +a++
  EPX73216.1 587 MSVLLSGPIASGKTALAAT 605
                 5799**********99986 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.0    0.0096       4.8      22      40 ..     308     326 ..     296     338 .. 0.80
   2 ?    4.5   0.0     0.042        21      21      91 ..     588     659 ..     564     679 .. 0.69

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0096
                 EEEE--TTSSTTHHHHHHH CS
        PhoH  22 vfaiGpaGtGKtylavala 40 
                 +   Gp GtGKt++a +++
  EPX73216.1 308 ILLYGPPGTGKTLVARQIG 326
                 6789***********8877 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.042
                 EEEEE--TTSSTTHHHHHHHHHHHHTTS-SEEEEEE-S--T..T----SS---------.TTTHHHHHHHTTTS CS
        PhoH  21 ivfaiGpaGtGKtylavalavealkkkkvkriiltrpavea..geelGflpgdleekvd.pylrplydaLkdll 91 
                  v   Gp  +GKt la ++a+   ++  + +++ +  +v +  + ++ +++g  e+ ++ p    ++d+++ l+
  EPX73216.1 588 SVLLSGPIASGKTALAATIALG--SDFPFIKLVTAESMVGMseNARVSYVNGVFEDSYRsPLSVIVVDEIERLI 659
                 46788********999988864..57777788888877755446677777777766554144445566666655 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.026        13      33      61 ..     303     331 ..     295     431 .. 0.75
   2 ?    4.3   0.0     0.048        24      27      52 ..     578     603 ..     557     610 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.026
        TniB  33 krmpnlllvGdsnnGKtmivekFarlhpp 61 
                 + ++ +ll+G++ +GKt ++++  ++ ++
  EPX73216.1 303 SHVKGILLYGPPGTGKTLVARQIGKMLNA 331
                 5678899**********999987666544 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.048
        TniB  27 leypkrkrmpnlllvGdsnnGKtmiv 52 
                 +++ +r+r  ++ll G+ + GKt+++
  EPX73216.1 578 VKNSERTRLMSVLLSGPIASGKTALA 603
                 6678899****************987 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0    0.0011      0.56       2      39 ..     308     351 ..     307     375 .. 0.75
   2 ?    0.9   0.0      0.97   4.8e+02       2      20 ..     589     607 ..     588     635 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.0011
      AAA_28   2 ivitGgestGKTtlleaLa....argypvv..pEaareileekl 39 
                 i + G+++tGKT +++++     ar+ ++v  pE+  +++ +  
  EPX73216.1 308 ILLYGPPGTGKTLVARQIGkmlnAREPKIVngPEILNKYVGQSE 351
                 7899***********88874444668888888999999985544 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.97
      AAA_28   2 ivitGgestGKTtlleaLa 20 
                 + ++G+  +GKT l++ +a
  EPX73216.1 589 VLLSGPIASGKTALAATIA 607
                 7899***********9888 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00031      0.16      20      58 ..     308     343 ..     299     377 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00031
      AAA_11  20 tliqGPPGtgKTktivellsqllsrrkseeeksakpriL 58 
                  l+ GPPGtgKT +  ++ ++l+ r   e +  ++p+iL
  EPX73216.1 308 ILLYGPPGTGKTLVARQIGKMLNAR---EPKIVNGPEIL 343
                 5899********9999999999533...33444444444 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0    0.0012      0.62      21      49 ..     308     336 ..     296     347 .. 0.84
   2 ?   -1.0   0.1       2.5   1.3e+03      65     114 ..     738     788 ..     723     790 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.0012
      AAA_30  21 avltGpAGtGKttalkalreaweaaggrv 49 
                  +l Gp+GtGKt + +++ ++++a++ ++
  EPX73216.1 308 ILLYGPPGTGKTLVARQIGKMLNAREPKI 336
                 5789**************99999886555 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 2.5
      AAA_30  65 elgieastiakllkrlk.grarlepgtllivDEagmvdtkqlaallkaaek 114
                 +++++a+ +++l   ++ +++++  +++l++ E++  d++++  ++++++k
  EPX73216.1 738 DTNVRADILQRLQGYTGtEKVDVGIAKILLIAETAKQDMDTASCFVESLAK 788
                 455566666666655558667888889999999999999999988887765 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00061       0.3       2      39 ..     308     345 ..     307     391 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00061
       AAA_3   2 vllegvPGlaktllvkalakaldlefkriqftpdllPs 39 
                 +ll g PG++ktl++++++k+l+++  +i   p++l  
  EPX73216.1 308 ILLYGPPGTGKTLVARQIGKMLNAREPKIVNGPEILNK 345
                 7999********************99999999988865 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00093      0.46      11      38 ..     306     333 ..     300     357 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00093
      AAA_19  11 kvllvtaGpGtGKTrvlkhivallvelg 38 
                 k +l+ ++pGtGKT v ++i ++l++++
  EPX73216.1 306 KGILLYGPPGTGKTLVARQIGKMLNARE 333
                 56899************99999887765 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0     0.079        40      19      42 ..     308     331 ..     303     348 .. 0.84
   2 ?    5.0   0.0     0.026        13      11      36 ..     581     606 ..     572     614 .. 0.82

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.079
  Zeta_toxin  19 illgGqpGAGKselaellkdeler 42 
                 ill G pG GK+ +a+ + + l++
  EPX73216.1 308 ILLYGPPGTGKTLVARQIGKMLNA 331
                 8999************99888764 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.026
  Zeta_toxin  11 psqerPklillgGqpGAGKselaell 36 
                  ++ r  ++ll+G  ++GK++la+ +
  EPX73216.1 581 SERTRLMSVLLSGPIASGKTALAATI 606
                 56677789**************9877 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.1      0.19        95      21      36 ..     305     319 ..     297     322 .. 0.84
   2 ?    5.7   0.0     0.025        12      24      38 ..     588     602 ..     573     608 .. 0.77

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.19
      AAA_29  21 lkgatlltGpsGsGKS 36 
                 +kg +ll Gp G+GK+
  EPX73216.1 305 VKG-ILLYGPPGTGKT 319
                 457.9**********6 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.025
      AAA_29  24 atlltGpsGsGKSTl 38 
                 ++ll+Gp+ sGK++l
  EPX73216.1 588 SVLLSGPIASGKTAL 602
                 59**********988 PP

>> Parvo_NS1  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.0    0.0052       2.6     117     137 ..     308     328 ..     303     334 .. 0.90
   2 ?    0.9   0.0       0.4     2e+02     116     138 ..     588     610 ..     575     620 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0052
   Parvo_NS1 117 vwfyGpantGktnlaeaIaka 137
                 +++yGp+ tGkt +a++I k 
  EPX73216.1 308 ILLYGPPGTGKTLVARQIGKM 328
                 899**************9776 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.4
   Parvo_NS1 116 tvwfyGpantGktnlaeaIakav 138
                  v++ Gp   Gkt la++Ia ++
  EPX73216.1 588 SVLLSGPIASGKTALAATIALGS 610
                 57889**************9665 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0     0.016       7.8       3      27 ..     308     332 ..     306     339 .. 0.84
   2 ?   -1.8   0.0         5   2.5e+03      80      99 ..     370     391 ..     341     420 .. 0.66
   3 ?    2.2   0.1       0.3   1.5e+02       3      22 ..     589     608 ..     587     610 .. 0.88
   4 ?   -1.7   0.0       4.7   2.4e+03      15      45 ..     671     699 ..     652     717 .. 0.71

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.016
                 EEEEC-TTTCHHHHHHHHHHHHCTS CS
       NACHT   3 vilqGeaGsGKTtLlqklalawaeg 27 
                 ++l G++G GKT  ++++   + ++
  EPX73216.1 308 ILLYGPPGTGKTLVARQIGKMLNAR 332
                 7899*************98777665 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 5
                 CCCEE..EEEE-STT-SS-TCH CS
       NACHT  80 perlL..lilDglDelvtdlgq 99 
                 +e+ L  +i+D lD ++++ g 
  EPX73216.1 370 EESGLhiIIFDELDAICKKRGS 391
                 4444565888999888877666 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.3
                 EEEEC-TTTCHHHHHHHHHH CS
       NACHT   3 vilqGeaGsGKTtLlqklal 22 
                 v+l G+  sGKT+L++ +al
  EPX73216.1 589 VLLSGPIASGKTALAATIAL 608
                 78889999*********986 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 4.7
                 HHHHHHHHHHCTS-SCCCC-SEEEEEETTTT CS
       NACHT  15 tLlqklalawaegklpqgafklvFflslrel 45 
                 tLlq l+++ +++ +++  ++l+++ +++e+
  EPX73216.1 671 TLLQTLMVLFKKQPPKG--HRLLILATSSER 699
                 56777777666666555..355555444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (793 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       529  (0.0295053); expected 358.6 (0.02)
Passed bias filter:                      504  (0.0281109); expected 358.6 (0.02)
Passed Vit filter:                        84  (0.00468515); expected 17.9 (0.001)
Passed Fwd filter:                        36  (0.00200792); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              36  [number of targets reported over threshold]
# CPU time: 0.78u 0.28s 00:00:01.06 Elapsed: 00:00:00.48
# Mc/sec: 4982.17
//
Query:       EPX73217.1  [L=169]
Description: hypothetical protein SOCG_00972 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-11   45.3   0.0    1.5e-11   44.9   0.0    1.2  1  TMEM70    Assembly, mitochondrial proton-transport ATP synth 


Domain annotation for each model (and alignments):
>> TMEM70  Assembly, mitochondrial proton-transport ATP synth complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.9   0.0   8.1e-16   1.5e-11       1     110 [.      36     144 ..      36     161 .. 0.86

  Alignments for each domain:
  == domain 1  score: 44.9 bits;  conditional E-value: 8.1e-16
      TMEM70   1 vKifSlstsllslllqPvlvlkaeksvsslvlkvaicgiigfftvltpvllHlitkkYVirlyydaetdeytavtynllltekkteFkqedVkvpevsk 99 
                 +K fS+ +  l+ ++ P ++l  ++ +  l+ ++++++++   + +++ l+H+  k+YV++   + ++   t +t+nll ++k+++++ ed + p++ +
  EPX73217.1  36 IKKFSVGSLGLTYMISPLMLLLDAEGMG-LATRLIMISTACAASTISTGLIHWAGKSYVTEGVLKDNSI--TFTTLNLLGRRKESKYNVEDLQTPDAAT 131
                 799*****************99999999.99******************************99887665..5579********************9755 PP

      TMEM70 100 ..mfttfyakgks 110
                   +ft++  ++ +
  EPX73217.1 132 srPFTNIETRNHP 144
                 449**99987644 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       322  (0.0179597); expected 358.6 (0.02)
Passed bias filter:                      253  (0.0141112); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.46
# Mc/sec: 1096.09
//
Query:       EPX73218.1  [L=308]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.5e-46  157.9   0.1      5e-46  157.4   0.1    1.2  1  Stk19     Serine-threonine protein kinase 19
  ------ inclusion threshold ------
       0.13   12.1   0.0       0.26   11.1   0.0    1.4  1  POTRA_2   POTRA domain, ShlB-type


Domain annotation for each model (and alignments):
>> Stk19  Serine-threonine protein kinase 19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.4   0.1   5.6e-50     5e-46       4     245 .]      79     300 ..      76     300 .. 0.89

  Alignments for each domain:
  == domain 1  score: 157.4 bits;  conditional E-value: 5.6e-50
       Stk19   4 mFsdipekaglnstriaevlklrrslPplvtvahlhsllaqsptkvereleelirkgklrklvingrgkdisklgevlvltedyeklikesseleeeek 102
                 mF+      + n tr ++++   +++P++++ ++l  +++++ t+v rele+ i+ g++r+l+++++++   + +++lvl +++++  +   ++++++k
  EPX73218.1  79 MFE------DANLTRESQLMI--ANCPRVIVETQLAGVYHSDFTNVSRELEKEIQIGNVRRLYLHRSDSF--SGESCLVLRSELNEIYQLYLNKHKDNK 167
                 555......456777777554..45*******************************************88..667***********9954444444444 PP

       Stk19 103 ....vlekFlellkenptalsisas.slseeeisaLvraGfLtssaneiesaeyslslPntGtflkllsagrkhLlslLkkskykEaleslLeerWeGa 196
                     +++k+ e+l ++ ++++ s++ +ls +e ++L++aGfLt++     +++y +slPn+G f+++l+++rk+L++++kk+++ E++e++L +r    
  EPX73218.1 168 elqlLITKLREFLCTHGSTSYSSEElNLSLQERRTLTTAGFLTLD----GTDSYGISLPNLGVFTHILHSSRKDLIQFFKKKPFYECIEASLLQR---- 258
                 445689***********9999977679******************....99********************************************.... PP

       Stk19 197 vegdkklsaakrkkwkefygldfewvLedalGaglvevfeTsvGrgvRl 245
                      ++s++ r+k+++f+g++f+  L+da+Gagl++ f+Ts+Gr++Rl
  EPX73218.1 259 -----NISVTARRKHETFFGWKFR--LCDAIGAGLIDAFMTSCGRAYRL 300
                 .....78888899***********..*********************96 PP

>> POTRA_2  POTRA domain, ShlB-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0     3e-05      0.26      15      51 ..     147     184 ..     138     187 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 3e-05
                 SHC.CHHHHHCCCSSSEEEHHHHHHHHHHHHHHHHHTT CS
     POTRA_2  15 sle.eleallqpylgkclgladlnqlakeltnayiekG 51 
                  l+ el++++q yl+k  + ++l+ l+++l +++  +G
  EPX73218.1 147 VLRsELNEIYQLYLNKHKDNKELQLLITKLREFLCTHG 184
                 44449*****************************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (308 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       608  (0.0339115); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.45
# Mc/sec: 2070.92
//
Query:       EPX73219.1  [L=806]
Description: cytoplasmic glutaminyl-tRNA ligase Qrs1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   6.2e-107  357.1   0.0   9.3e-107  356.5   0.0    1.3  1  tRNA-synt_1c     tRNA synthetases class I (E and Q), catalyti
    6.9e-51  172.5   2.3    1.2e-50  171.7   2.3    1.4  1  tRNA_synt_1c_R1  Glutaminyl-tRNA synthetase, non-specific RNA
    2.4e-33  115.5   0.1    1.6e-31  109.5   0.0    3.0  3  tRNA-synt_1c_C   tRNA synthetases class I (E and Q), anti-cod
      2e-13   51.1   2.0    4.5e-13   49.9   2.0    1.6  1  tRNA_synt_1c_R2  Glutaminyl-tRNA synthetase, non-specific RNA


Domain annotation for each model (and alignments):
>> tRNA-synt_1c  tRNA synthetases class I (E and Q), catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  356.5   0.0  2.1e-110  9.3e-107       2     312 ..     257     564 ..     256     566 .. 0.98

  Alignments for each domain:
  == domain 1  score: 356.5 bits;  conditional E-value: 2.1e-110
                   -EEEE---SSSS-BHHHHHHHHHHHHHHHHTT-EEEEEE--SSCCC--HHHHHHHHHHHHHTT---SSEEEEGGGGHHHHHHHHHHHHHTTSEEEE- CS
  tRNA-synt_1c   2 VrtRfaPePtGyLHiGhakaallnylfAknnnGkfilRieDTdperekeeaeesiledlkwlgikwdekptyqsdrfdelkkyaeeLikkGkAYvce 98 
                   V+tRf+PeP+GyLHiGh+ka+ +n++fA++++G ++lR++DT+pe e+++++esi+++++wlg+++ +k+ty+sd+fd+l+++ae Likk k+Y c+
    EPX73219.1 257 VVTRFPPEPNGYLHIGHSKAIAVNFGFARHHKGICYLRFDDTNPEAEEAKYFESIKDIISWLGFSP-YKITYSSDYFDQLYALAELLIKKDKGYICH 352
                   89****************************************************************.****************************** PP

                   STHHHHHHHHCCSS...HSS-TTTTS-HHHHHHHHHHHHHTTHSTTTS-EEEESSBTTSS.GGGSSTEEEEEEESGGGSBTTTBTSTSEEE-HHHHH CS
  tRNA-synt_1c  99 ctkeeleeereeqe...klgskerdrydeenlklfeeemkkgkaegekavvRlkideess.vefrDlvrgriklepqeihdlvivksdiyPtYdfav 191
                   ct  e+++ r+ +e   ++++++r+r++ee+l+ f ++m++gk++ ++a++R+k++      +++Dl+++r+  +p   h+++++k++iyPtYdf++
    EPX73219.1 353 CTDAEIKKARGGEErgpRYACVHRNRPIEESLAEF-RNMRDGKYKPKEAILRMKQNLDDGnPQMWDLIAYRVLDTP---HPRTGDKWKIYPTYDFTH 445
                   **********998889999****************.9******************9987779**************...****************** PP

                   HHHHHHTT-SEEEEEGGGGCCHHHHHHHHHHTT-S.-EEEEEE--EEETTSB-SHHHHHHHHHTTSSSSTT-TTSCBHHHHHHCTB-HHHHHHHHHH CS
  tRNA-synt_1c 192 vidDaleeithvlrteefldntpkyiwllealglevppfiheylrlnlekkklSKRklsllvdekqvkewddlreallnflrrlGwtpekerelftr 288
                   +++D+ e+ith+l+t+ef+ ++ +y wl++ l+++ +p+++ey rln+ ++++SKRk+  lv+e +v++wdd+r+ +l +lrr+G++p ++ e+++ 
    EPX73219.1 446 CLVDSFENITHSLCTTEFILSRVSYEWLCNSLEVY-CPAQREYGRLNVVGTLMSKRKIMKLVNEGYVHGWDDPRLYTLVALRRRGVPPGAILEFVSD 541
                   ***********************************.99*********************************************************** PP

                   HCCCSSS.EEEEHHHHHHHHHHHH CS
  tRNA-synt_1c 289 eeliksfdlnresksleafdrkkL 312
                    ++++++  n+e+ ++e ++r  L
    EPX73219.1 542 VGVTTAV-SNIEVARFENCVRSFL 564
                   *******.**********999877 PP

>> tRNA_synt_1c_R1  Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  171.7   2.3   2.7e-54   1.2e-50       1     161 [.       6     167 ..       6     168 .. 0.95

  Alignments for each domain:
  == domain 1  score: 171.7 bits;  conditional E-value: 2.7e-54
  tRNA_synt_1c_R1   1 eelielfksiGLsekkaketlknkklsaslkevieeagveekgldkkkgalLysla.tklk...kqalekrelivkyIvegklktslqvdaAlk 90 
                      eel ++f siGL+e+++k+tlknkkls++l++vi+ea+++e+g+d+++g+lL++la  +lk   ++ ++++++i+++Iv+g++k++lqv+aA+ 
       EPX73219.1   6 EELDRKFMSIGLNETRVKDTLKNKKLSSALNRVIDEAKLKESGCDRSVGNLLMTLAnESLKqkdTKLQKHEPYICSKIVKGDIKSTLQVNAAIG 99 
                      67889***************************************************6566677767789************************* PP

  tRNA_synt_1c_R1  91 YlskkkeeeideaefekacGVGvevtpeqieeaVekyieenkeeieekryrknlgkllaevkklpeLkWAd 161
                      Y+  k++++i+e+ef+k+ GVGv++tpeqi+e V +yi+en+e+i+e+ry ++++++ ++++++p LkWA 
       EPX73219.1 100 YC--KNTDSINEEEFDKELGVGVTCTPEQITELVGQYIKENEEKIVEQRY-ASFNATSSALRQHPILKWAS 167
                      **..66679*****************************************.*******************6 PP

>> tRNA-synt_1c_C  tRNA synthetases class I (E and Q), anti-codon binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1       0.9     4e+03      79     117 ..     136     173 ..     125     210 .. 0.60
   2 !  109.5   0.0   3.5e-35   1.6e-31       2     157 ..     569     742 ..     568     747 .. 0.89
   3 ?    2.2   0.0     0.032   1.4e+02     158     174 .]     763     779 ..     752     779 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 0.9
  tRNA-synt_1c_C  79 kdesgevte.lkleydgesleearkkkgiihWvsaeeave 117
                     k+++++++e  +++++ +s   a +++ i++W s+ +  +
      EPX73219.1 136 KENEEKIVEqRYASFNATSS--ALRQHPILKWASQLDVKQ 173
                     44445555524444444222..235555999988744333 PP

  == domain 2  score: 109.5 bits;  conditional E-value: 3.5e-35
  tRNA-synt_1c_C   2 pRymaVldpvkvtienlpegkeeelevplhpknpelgtrkvpfskeiyiereD........akrlkpgeevrLke.lynikveevekdesgevte 87 
                     pR+m+  dpvk+t+enl ++++ee+++p++pknp++g+r+  ++k++yi+r+D        ++rl+ ++ v L +  + + ++++ kd+sg+v+e
      EPX73219.1 569 PRLMFLPDPVKITLENLADDYREEIQIPFNPKNPSMGSRTQYLTKTVYIDRSDfreeassdFFRLTLNQPVGLFRaSCPVVAKKIIKDDSGKVVE 663
                     9****************999*****************************************************886899**************** PP

  tRNA-synt_1c_C  88 lkleydgesleearkkkgiihWvsa....eeavea.evrlYdrLfkeee.de...dfl...lnpdslkvleeglaepalanl 157
                     + +eyd+ sl  + k+k++++Wvs+     ++v+  e rlY++Lfk ++ ++   ++l   lnp+s+ vl++ ++e  + +l
      EPX73219.1 664 IIAEYDQ-SL--SMKPKTFVQWVSEdsasGSPVRLsETRLYNNLFKCDNpAAlkdHDLadqLNPESEIVLKNSMVETGIYDL 742
                     ******8.88..459*********9765545577799*********666444666444566***************999876 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.032
  tRNA-synt_1c_C 158 kkgdivQfeRiGyfrvd 174
                      +  ++Q  R Gyf++d
      EPX73219.1 763 PESVRFQAMRVGYFCLD 779
                     556789*********98 PP

>> tRNA_synt_1c_R2  Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.9   2.0     1e-16   4.5e-13       1      92 [.     171     250 ..     171     259 .. 0.66

  Alignments for each domain:
  == domain 1  score: 49.9 bits;  conditional E-value: 1e-16
  tRNA_synt_1c_R2   1 vKnevDaqllelLGPKteaDnlkpkkkkkkkkkkkeekkkaakkakkekeeeesegaetieel..egellkfHkpgeNfktdgyvvtpntkelL 92 
                      vK+ +D+++lelLGPK+e+D  +p  kk k +k k+++k+++k +++        ++++  ++  eg+l+k+Hkpg N++     + +++ke+L
       EPX73219.1 171 VKQTLDKKYLELLGPKDERD--APTGKKGKGNKGKADTKEQKKGTTS--------SSKSNYNMfeEGFLAKLHKPGGNPQ----LIPERMKEHL 250
                      7*******************..4433333333333333333332222........23344555589**************....5555566555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (806 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       609  (0.0339673); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.68u 0.26s 00:00:00.94 Elapsed: 00:00:00.43
# Mc/sec: 5589.64
//
Query:       EPX73220.1  [L=459]
Description: sporulation specific 1,3-beta- glucanosyltransferase Gas4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   3.3e-140  466.8   4.6   4.1e-140  466.5   4.6    1.0  1  Glyco_hydro_72  Glucanosyltransferase
    2.9e-05   23.7   0.8     0.0003   20.3   0.6    2.2  2  Cellulase       Cellulase (glycosyl hydrolase family 5)


Domain annotation for each model (and alignments):
>> Glyco_hydro_72  Glucanosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  466.5   4.6  4.6e-144  4.1e-140       7     314 ..      23     332 ..      18     333 .. 0.98

  Alignments for each domain:
  == domain 1  score: 466.5 bits;  conditional E-value: 4.6e-144
                     TTS--EEEETTEEEETTT-BBE-EEEEE--BE------SSB-GGG-HHHHHHHHHHHHHHT-SEEEES---TTS--HHHHHHHHHTT-EEEEES- CS
  Glyco_hydro_72   7 eaveaieikgnkffdsksgeqfyikGvdyqpggseevsslvdpladaeaCkrdikllkelgvntvrvyavdnskdhdeCmkalsdagiyvildln 101
                     +++++i ikgn+ffds+sge+fy++Gvdyqpggs   sslvdpla  ++C +d++++k++gvnt+rvy+vdn +dhd+Cmka+++agiyvildln
      EPX73220.1  23 AKTSPIIIKGNAFFDSESGERFYLRGVDYQPGGS---SSLVDPLAT-NSCLKDVEIFKKMGVNTIRVYQVDNAADHDTCMKAFEEAGIYVILDLN 113
                     6899******************************...8*******8.99********************************************** PP

                     BTTBS--TTS-..---HHHHHHHHHHHHHHTT-TTEEEEEEEESSS-STT-GGGHHHHHHHHHHHHHHHHHSSS----EEEEE---TTTHHHHHH CS
  Glyco_hydro_72 102 epkesinradpassynedllervfkvidafkeyknvlgffaGnevvndksntaasayvkavvrdvkeyikkkkerkiPvGysaaddaelrvelae 196
                     + ++si+radpa syn+++l++vf+++dafk+y+nvlgff+Gnevvnd+ +t+a ++vka +rdvk+yikk+++r+iPvGysaad+ae+r+ela+
      EPX73220.1 114 TFRHSISRADPAISYNKVYLQHVFSTVDAFKDYDNVLGFFSGNEVVNDH-ETTAITWVKATTRDVKAYIKKHASRQIPVGYSAADIAENRLELAH 207
                     ************************************************9.7889***************************************** PP

                     HTTBTT-..--S-EEEEE----SS--HHHHSHHHHHHHHTT-SS-EEEEEE---SSS.......S---THHHHHTSHHHHTTEEEEEES-SB--S CS
  Glyco_hydro_72 197 ylaCgdeddkadffglnmyeWCgkssfktsGydertkefenysiPlflseyGCnkvt.......prkftevealyseemtsvfsGGlvyeyseea 284
                     y++Cg+e+++adf+++nmyeWCg+ss+++sGy +r++ef+nysiPlflse+GCn+v+       +r+fte+ea+ys emt+ fsGGlvyeys e 
      EPX73220.1 208 YFNCGNEEERADFYAFNMYEWCGHSSMSVSGYFDRIREFSNYSIPLFLSEFGCNTVEifedqtpNRPFTEIEAIYSPEMTESFSGGLVYEYSAEP 302
                     ***************************************************************9******************************* PP

                     SS--SEEE-TTS-EEE-THHHHHHHHHHH- CS
  Glyco_hydro_72 285 nnyGlvkiddddvkkllkdfenlkseykki 314
                     nnyGlv idd++++k++k+  +l+++++k+
      EPX73220.1 303 NNYGLVIIDDNENRKISKNCVTLMKQFQKV 332
                     ***************************997 PP

>> Cellulase  Cellulase (glycosyl hydrolase family 5)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.6   3.4e-08    0.0003      59     153 ..      89     182 ..      69     191 .. 0.71
   2 ?    0.7   0.0     0.031   2.8e+02     222     248 ..     236     262 ..     205     275 .. 0.79

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 3.4e-08
                 HHHHHHHHHHHHHHHTT-EEEEEEESSTTTCSSSSTTTTHHHHHHHHHHHHHHHHHHHTTTTTTEEEESSSS--STTCT..CCTCHHHTTHHHHHHH CS
   Cellulase  59 nslerveevvkyakenglyvildiHseegwltkadgnssedtaeeffkklwtqiAerykkndevvifelmNEPhgnntg..aewtseeadevkayae 153
                 ++ ++ ++ +k+++e+g+yvild+      + +a   + ++  + ++++ +    + +k++d+v++f   NE     ++   +w + ++ +vkay +
  EPX73220.1  89 DNAADHDTCMKAFEEAGIYVILDLNTFRHSISRA--DPAISYNKVYLQH-VFSTVDAFKDYDNVLGFFSGNEVVNDHETtaITWVKATTRDVKAYIK 182
                 456778999***************8852222222..3333333444444.555699****************9885555667787777777777765 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.031
                 HHHHHHHHHHHHHTTSEEEEEEEESST CS
   Cellulase 222 aqrledaakylvekgipviigEfGgsn 248
                  + + d ++ + +  ip++++EfG ++
  EPX73220.1 236 VSGYFDRIREFSNYSIPLFLSEFGCNT 262
                 556667788899999*********754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (459 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       561  (0.0312901); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 3224.34
//
Query:       EPX73221.1  [L=287]
Description: 19S proteasome regulatory subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.3e-27   93.4   3.2    9.7e-27   93.4   0.7    2.0  2  RPN13_C          UCH-binding domain
    7.9e-24   84.0   0.0    1.4e-23   83.2   0.0    1.4  1  Proteasom_Rpn13  Proteasome complex subunit Rpn13 ubiquitin r
  ------ inclusion threshold ------
       0.02   15.2   0.0      0.045   14.0   0.0    1.7  1  DUF1400          Alpha/beta hydrolase of unknown function (DU
      0.064   13.4   1.7       0.13   12.4   0.8    1.9  3  DUF1380          Protein of unknown function (DUF1380)


Domain annotation for each model (and alignments):
>> RPN13_C  UCH-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.1      0.25   1.1e+03      54      73 ..     103     122 ..      96     149 .. 0.66
   2 !   93.4   0.7   2.2e-30   9.7e-27       2     112 .]     168     275 ..     167     275 .. 0.96

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.25
     RPN13_C  54 teeelretlrSPqfrqalss 73 
                 +++ +++ ++  +f+++++s
  EPX73221.1 103 NASRINSLIHGQDFQESVQS 122
                 55677777777777777765 PP

  == domain 2  score: 93.4 bits;  conditional E-value: 2.2e-30
     RPN13_C   2 silaslqqakaaaqepevsLsdiltpealspllsdpevveeLashLPeegeateeelretlrSPqfrqalsslsqALqsgqlgpvlsqlgLdeeavaaa 100
                 ++l++++++++    ++v+L+d+l+p+++ +l+ ++ v+e+L+++LP++++at+e+++e+l+SPq++qa++slsq L+s + ++v+s+lgL+++++++ 
  EPX73221.1 168 NLLNNISSQRS---LSTVDLTDVLKPSNVRELVGQEGVIEQLMPFLPPDTPATPEAVMEVLNSPQYAQAVRSLSQTLNSPNGSEVISALGLSPDESSSP 263
                 67778887777...68*********************************************************************************** PP

     RPN13_C 101 akggveaFlkAl 112
                 ++ g  +FlkA+
  EPX73221.1 264 NEVGALQFLKAI 275
                 ***********7 PP

>> Proteasom_Rpn13  Proteasome complex subunit Rpn13 ubiquitin receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.2   0.0   3.1e-27   1.4e-23       1      86 []       9      94 ..       9      94 .. 0.96

  Alignments for each domain:
  == domain 1  score: 83.2 bits;  conditional E-value: 3.1e-27
  Proteasom_Rpn13  1 GkceldektkkvkpdprkGliylykeeeellhfkWkdrektgeaeddlilipgdasfkkveqcktgRvyvLkfksssqrlfFWlQd 86
                     Gk+++   tk++++dp kG i++ ++ ++l+hf+W +r++++++edd++++p++++f+k+e+c++gR yvLk+ sss +lf+W+Qd
       EPX73221.1  9 GKLRRVPGTKTLRADPAKGFISMSRDADGLTHFQWGKRNEMDAPEDDIVVFPSECNFEKIEECQNGRGYVLKYPSSSLSLFYWMQD 94
                     6777777899**************99999********************************************************8 PP

>> DUF1400  Alpha/beta hydrolase of unknown function (DUF1400)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0     1e-05     0.045      46     118 ..     203     274 ..     162     280 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1e-05
     DUF1400  46 reelreaLqaeiklspvllsqllnspigeklLerlgeviqtesdqngkealrsAlila...aadpeglsllnfLrk 118
                  e+l  +L  + + +p+++ ++lnsp+  + +++l+++++++++++    + sAl l+   +++p+++ +l+fL++
  EPX73221.1 203 IEQLMPFLPPDTPATPEAVMEVLNSPQYAQAVRSLSQTLNSPNGSE----VISALGLSpdeSSSPNEVGALQFLKA 274
                 567778888899999999**********************997776....44444443111455788888888886 PP

>> DUF1380  Protein of unknown function (DUF1380)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       2.5   1.1e+04      20      39 ..      84     102 ..      79     106 .. 0.69
   2 ?   12.4   0.8   2.9e-05      0.13      30      91 ..     122     184 ..     119     197 .. 0.87
   3 ?   -2.2   0.0      0.94   4.2e+03      33      33 ..     232     232 ..     212     284 .. 0.54

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 2.5
     DUF1380  20 tplalivWspediealadgm 39 
                   l+l  W  +di+a  d  
  EPX73221.1  84 SSLSLFYWM-QDIDASNDHT 102
                 468888885.7899888765 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 2.9e-05
     DUF1380  30 ediealadgmeyslseqevravlarlddip.eeqrlesGissaavmelieqvkenrktvtvpa 91 
                  d+ + +d m++    q   a  ++l + + ++++l++  +s++v++l+++++++r   tv+ 
  EPX73221.1 122 SDVATVSDAMDVDAVGQTESANQEQLSAPGtQDEHLDEASASETVRNLLNNISSQRSLSTVDL 184
                 6999999****99999999999999998762678*********************99999884 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 0.94
     DUF1380  33 e 33 
                 +
  EPX73221.1 232 Q 232
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (287 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       599  (0.0334096); expected 358.6 (0.02)
Passed bias filter:                      405  (0.0225891); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.45
# Mc/sec: 1902.19
//
Query:       EPX73222.1  [L=801]
Description: DNA repair protein RAD9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.7e-18   65.5   0.1    7.6e-18   64.1   0.1    1.8  1  Tudor_3          DNA repair protein Crb2 Tudor domain
    1.6e-12   47.6   1.2    8.4e-11   42.1   0.1    2.7  2  BRCT             BRCA1 C Terminus (BRCT) domain
    1.6e-08   34.8   0.2    8.1e-06   26.2   0.0    2.8  2  BRCT_2           BRCT domain, a BRCA1 C-terminus domain
    3.1e-06   27.4   0.0    6.1e-06   26.5   0.0    1.5  1  Rad9_Rad53_bind  Fungal Rad9-like Rad53-binding
    0.00028   20.7   0.2     0.0008   19.2   0.2    1.8  1  RTT107_BRCT_5    Regulator of Ty1 transposition protein 107 B
  ------ inclusion threshold ------
      0.011   15.5   0.0       0.44   10.4   0.0    2.5  2  Rho_RNA_bind     Rho termination factor, RNA-binding domain
      0.085   12.9   0.0       0.25   11.4   0.0    1.8  1  DUF4537          Domain of unknown function (DUF4537)


Domain annotation for each model (and alignments):
>> Tudor_3  DNA repair protein Crb2 Tudor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.1   0.1     3e-21   7.6e-18       2      52 .]     382     435 ..     381     435 .. 0.97

  Alignments for each domain:
  == domain 1  score: 64.1 bits;  conditional E-value: 3e-21
                 GGEEEEE-SSSS--EEEEEEEEEEE-SSS...EEEEEETTS-EEEEETTSEEES CS
     Tudor_3   2 pnrVfAlfkGkkraYYPAtclgvsssgsq...rykVrFdDgtpeevdskqvrrL 52 
                 +nrV+A+fkG++  YYPAt+l+++ s+++   +++++FdD+t+++v+++q++r+
  EPX73222.1 382 ENRVLAFFKGYPAFYYPATVLSQTVSSASgipQFRIQFDDYTTSTVNINQLKRF 435
                 7***********************999999**********************97 PP

>> BRCT  BRCA1 C Terminus (BRCT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.1   0.1   3.3e-14   8.4e-11       3      78 ..     558     660 ..     556     661 .. 0.94
   2 ?    3.5   0.2     0.036        93      67      79 .]     780     792 ..     776     792 .. 0.89

  Alignments for each domain:
  == domain 1  score: 42.1 bits;  conditional E-value: 3.3e-14
                 TTTTTTEEEEE..EESTSSHHHHHHHHHHHHTTCEE.........................ESSCSTTSSEEEESSSHSHHHHHHHHHHTTSEEEETHH CS
        BRCT   3 ellfhgckfvi..tgvldnftrdeleelikehGGkv.........................ttevskktthlvvgepesrslkylealklnipivheew 74 
                   +fh c+fv+   ++ d+ +r+ l +l+k +GG v                         +++  ++   +++++++sr+ kyleal+ln p+vh+ +
  EPX73222.1 558 TSIFHTCVFVFtgLNTVDDNERSLLINLVKQNGGAVleeglsalfcnyyngkgkiffplkpHKRSQSWKYAFLISDTHSRKVKYLEALALNLPCVHPRF 656
                 679********88778888888888************************************************************************** PP

                 HHHH CS
        BRCT  75 lldc 78 
                 +  c
  EPX73222.1 657 ITIC 660
                 9876 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.036
                 SEEEETHHHHHHH CS
        BRCT  67 ipivheewlldci 79 
                 +p+v++ew+ +c+
  EPX73222.1 780 VPVVDFEWIIECV 792
                 79**********5 PP

>> BRCT_2  BRCT domain, a BRCA1 C-terminus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   0.0   3.2e-09   8.1e-06       2      84 ..     558     672 ..     557     673 .. 0.83
   2 !    5.9   0.0    0.0068        18      55      73 ..     774     792 ..     744     800 .. 0.81

  Alignments for each domain:
  == domain 1  score: 26.2 bits;  conditional E-value: 3.2e-09
      BRCT_2   2 sklFeglrFYin..daepspsreklkklIeknGGevveti..........................tsavyiviaesneee....laekrkrrvvspky 68 
                 + +F+ + F     ++ ++++r+ l  l+++nGG v e+                           + ++ ++i+ +++ +    +a   +++ v+p++
  EPX73222.1 558 TSIFHTCVFVFTglNTVDDNERSLLINLVKQNGGAVLEEGlsalfcnyyngkgkiffplkphkrsqSWKYAFLISDTHSRKvkylEALALNLPCVHPRF 656
                 6799999999988899999*****************77777778888888888888888888775433355666666666699999999********** PP

      BRCT_2  69 IkdCikkgkllpleny 84 
                 I+ C++k+k+++ +++
  EPX73222.1 657 ITICVQKQKMVDFSPF 672
                 ************9987 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0068
      BRCT_2  55 laekrkrrvvspkyIkdCi 73 
                  + +++ +vv++++I +C+
  EPX73222.1 774 GNLDTTVPVVDFEWIIECV 792
                 5678999***********8 PP

>> Rad9_Rad53_bind  Fungal Rad9-like Rad53-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.0   2.4e-09   6.1e-06      19     110 ..     391     488 ..     376     501 .. 0.73

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 2.4e-09
  Rad9_Rad53_bind  19 qqaklkyYpakilskgtsqd....kvlvkfeega.vevkkedvkyLdlriGdkvkvdm...ktyvvrglekkisadekvircirGydtvllkkv 104
                      ++    yYpa++ls+  s +    +  ++f++ + + v+ +++k+ +l+ Gd v+      ++ v+r++    ++ + + ++i G d+vll+ v
       EPX73222.1 391 GY-PAFYYPATVLSQTVSSAsgipQFRIQFDDYTtSTVNINQLKRFELKKGDVVRSTAlklNHSVLRTYSSSTENISVTCTDIFGNDMVLLR-V 482
                      55.5679******99665541112689*****99899*****************9988543466667777665555556889******9997.5 PP

  Rad9_Rad53_bind 105 kssGkl 110
                       ++G +
       EPX73222.1 483 DKNGDV 488
                      555544 PP

>> RTT107_BRCT_5  Regulator of Ty1 transposition protein 107 BRCT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.2   3.1e-07    0.0008      52     100 .]     626     674 ..     611     674 .. 0.92

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 3.1e-07
                    T-SEEE-SS---SHHHHHHCCCTTEEE-CHHHHHHHHHTS---SGGGB- CS
  RTT107_BRCT_5  52 kcntliApkilRTeKFLksLskapkilspdfiedvLkkkklldleeyll 100
                    k   li++   R +K+L++L+ +   ++p+fi+ +++k+k++d++++ll
     EPX73222.1 626 KYAFLISDTHSRKVKYLEALALNLPCVHPRFITICVQKQKMVDFSPFLL 674
                    567899**************************************99975 PP

>> Rho_RNA_bind  Rho termination factor, RNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00017      0.44      29      48 ..     427     446 ..     421     455 .. 0.89
   2 ?    2.1   0.0      0.07   1.8e+02      25      38 ..     493     506 ..     471     512 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00017
                   E-CCCCCCTT--TT-EEEEE CS
  Rho_RNA_bind  29 VsasqirkfgLrtGDaveGk 48 
                   V+ +q ++f+L++GD+v+ +
    EPX73222.1 427 VNINQLKRFELKKGDVVRST 446
                   7899*************876 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.07
                   T-EEE-CCCCCCTT CS
  Rho_RNA_bind  25 edvYVsasqirkfg 38 
                   + +Y+ +sqirkf+
    EPX73222.1 493 STIYLIPSQIRKFK 506
                   679*********97 PP

>> DUF4537  Domain of unknown function (DUF4537)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   9.8e-05      0.25      49     105 ..     372     431 ..     351     439 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 9.8e-05
     DUF4537  49 edakehslkvgDkVLAlhdpeeqeYvPGiVlagp...sakeeeltVrfydgkkakvpree 105
                 e++ ++ lkv+ +VLA  + +   Y+P++Vl++    ++   ++ ++f d ++++v+ ++
  EPX73222.1 372 EKPINNILKVENRVLAFFKGYPAFYYPATVLSQTvssASGIPQFRIQFDDYTTSTVNINQ 431
                 45558899***********************98887777778899999999999887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (801 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       916  (0.0510904); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.67u 0.28s 00:00:00.95 Elapsed: 00:00:00.45
# Mc/sec: 5405.27
//
Query:       EPX73223.1  [L=374]
Description: RTT109 family histone lysine acetyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-63  215.5   0.6    1.5e-63  215.2   0.6    1.0  1  HAT_KAT11  Histone acetylation protein


Domain annotation for each model (and alignments):
>> HAT_KAT11  Histone acetylation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  215.2   0.6   8.5e-68   1.5e-63       1     330 [.       1     330 [.       1     346 [. 0.90

  Alignments for each domain:
  == domain 1  score: 215.2 bits;  conditional E-value: 8.5e-68
   HAT_KAT11   1 LnelLakvlpkdekfkirhlsskpkevealivakkkeaeskpektykekhflalsenddkeviifglevlvYitvfdeanerliFVSkaDstgylkllk 99 
                 +++++ak +  ++++++++l+s+ ++++ l++ ++k+    +++ +  +h++ + end   v++fgle++vY +     n+ +iFV+k+Dstg+ ++ +
  EPX73223.1   1 MQDAWAKRIVVGKSLTVYYLQSEYEKCHNLYGKSSKS----KDFKFA-SHLFLVKEND---VLVFGLECVVYKK----LNKSIIFVAKVDSTGLGTH-S 86 
                 57899***************************88774....778887.9*********...*************....9******************.8 PP

   HAT_KAT11 100 vkvadivetllsylisikqreylrkvklsLFtraqdqYLFPnssknpkKHvLddkgLlkWWikvldkilr....................esakssatk 178
                  + + ++ + ++ +i+++ +e++ +v ++LF+ +q qYLFP+ss+n +K vL+d gLl WW+k+l+ i +                    +s k+++ +
  EPX73223.1  87 ASSSGLAASAIETVINTQYKEGAVEVEVTLFAISQGQYLFPESSENGHKRVLSDTGLLHWWVKCLETIRKdyspqekqnkeetekisterSSPKTENHS 185
                 9999999*********************************************************************************98666666679 PP

   HAT_KAT11 179 aklvipGkdkletrkfipataksdnWlvghileeisddkavyeiPlFpDDPKgrfleelieEgrlksvsldqfweelafrqEfslgrlvgfigleveet 277
                 a++++pG  +l+   ++p++     W++g  +++ +   a+  iP++pDDPK+r+l el++     ++s+++fw++l+frqE+ +g+lvgf +l++ + 
  EPX73223.1 186 AFMFVPGLPSLRS--YLPNSF----WKQGTAIQHGK---AIDMIPRYPDDPKARYLYELQDQ--RSEISVAEFWDTLSFRQECCSGKLVGFYTLNLPKC 273
                 *********8877..999887....****9998887...*********************99..4556**************************99888 PP

   HAT_KAT11 278 veeddvikp....kklvkskkqyksikskikkeeydkeesaeelvqnlssellesme 330
                 +e+++ +++     +lv   k y+ i++++ k+++ + + a++++++  +e ++ ++
  EPX73223.1 274 PEQAEPFEErtsdFGLVLPPKLYRIIYDSLLKHSFRSPSIASQSTKTFFNETIAAIQ 330
                 666665555555679999*******************99999999888777666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (374 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       668  (0.0372581); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2647.93
//
Query:       EPX73224.1  [L=271]
Description: 19S proteasome regulatory subunit Rpn12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.8e-21   75.0   0.9      1e-20   74.2   0.0    1.7  2  CSN8_PSD8_EIF3K  CSN8/PSMD8/EIF3K family
    3.4e-05   23.4   0.0    4.5e-05   23.0   0.0    1.2  1  SAC3_GANP        SAC3/GANP family
     0.0026   18.3   0.1       0.12   13.0   0.1    2.5  1  PCI              PCI domain


Domain annotation for each model (and alignments):
>> CSN8_PSD8_EIF3K  CSN8/PSMD8/EIF3K family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.2   0.0   1.7e-24     1e-20       5     136 ..      94     225 ..      90     233 .. 0.92
   2 ?   -1.5   0.1      0.39   2.3e+03      28      46 ..     244     262 ..     240     269 .. 0.69

  Alignments for each domain:
  == domain 1  score: 74.2 bits;  conditional E-value: 1.7e-24
  CSN8_PSD8_EIF3K   5 elytniLlkaLtqndladfrlllkrlpaa.iqqsdeeiqklltLetlLeeanyakfwstlksddlsadltadvagleelvReeiaklvgkaYes 97 
                       +++++Ll++L++n++a+f+++l+ +p++ + ++d  +  +++Le+ ++e+++ k+ s+++s    ++++++++   ++vR+eia++ +k Y++
       EPX73224.1  94 IVTALNLLYLLSDNRIAEFHTALESVPEKsLFEKDAHVVWVMSLEQNVMEGAFDKVASMIRSC-AFPEFSYFMKIVITMVRNEIASCAEKVYTT 186
                      57899**********************86256789**************************95.8899************************** PP

  CSN8_PSD8_EIF3K  98 IsadvlaelLglssdeelekfvkevgWeldaatvivpfn 136
                      I  +++++lL l++ +e+e  + e+gW + + + ++p +
       EPX73224.1 187 IPLSNATSLLYLENTKETEALAAERGWIIKEGVLHFPSE 225
                      *****************************9998888844 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.39
  CSN8_PSD8_EIF3K  28 krlpaaiqqsdeeiqkllt 46 
                      ++ p+a +++ ++i++ll+
       EPX73224.1 244 ELPPTADKHTIQSIRQLLQ 262
                      5667888888777777765 PP

>> SAC3_GANP  SAC3/GANP family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.0   7.6e-09   4.5e-05     144     291 ..      68     215 ..      56     217 .. 0.83

  Alignments for each domain:
  == domain 1  score: 23.0 bits;  conditional E-value: 7.6e-09
                 HHHHHHHHHHHHHHHHHH...---TTHHHHHHHHHHHTTT-...HHHHHHHCTS-HHHH..TSHHHHHHHHHHHHH--TTHHHHHHHHTTS-HHH.HHH CS
   SAC3_GANP 144 eqLqkclqsLlelYddlrkkkeelpneaefrayylLlnlrd...pdilrevqelpseil..kspevqlalklvaalqennyvrffklvkevsylq.acl 236
                 e + +  +++  +Y+d +    ++p+   ++a++lL+ l+d   +++ + ++++p++ l  k+++v ++++l + ++e+ + ++ ++++++ + + + +
  EPX73224.1  68 EAFARYASQVVPFYHDPA--LAPSPRMGIVTALNLLYLLSDnriAEFHTALESVPEKSLfeKDAHVVWVMSLEQNVMEGAFDKVASMIRSCAFPEfSYF 164
                 566666677777888877..567888888999999999988555677788899976543237899************************8888763678 PP

                 HGGGHHHHHHHHHHHHHHHS-TT---EEHHHHHHHTT-SSHHHHHHHHHHTT--E CS
   SAC3_GANP 237 lerhfnevRrkalkalsraykskskkvpleeLaelLlfddeeeaeefceayglev 291
                 +++ ++ vR+++ ++  + y    +++pl++ ++lL++++++e+e++  + g  +
  EPX73224.1 165 MKIVITMVRNEIASCAEKVY----TTIPLSNATSLLYLENTKETEALAAERGWII 215
                 9999****************....89*******************9998888766 PP

>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.1   1.9e-05      0.12       5      80 ..      99     207 ..      96     211 .. 0.66

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.9e-05
                 HHHHHHHHTSHHHHHHHHHHHHHHHHHHTTHHH...............................HHHHHHHHHHHHHHHHHHH.CESEEEHHHHHHHHT CS
         PCI   5 dllkalrsgnlsgfseelkdleeelladdglaq...............................llesLekkvrerllrqvsk.iyssislerlaklld 71 
                  ll  l ++++++f ++l+++ e++l +++ +                                +  + +  + ++ + ++++  y++i+l+  ++ll 
  EPX73224.1  99 NLLYLLSDNRIAEFHTALESVPEKSLFEKDAHVvwvmsleqnvmegafdkvasmirscafpefsYFMKIVITMVRNEIASCAEkVYTTIPLSNATSLLY 197
                 5888899999***********555555555555455555555555555555555555555556666666666666666666668888888888888888 PP

                 SSH.HHHHHH CS
         PCI  72 lsv.devEki 80 
                 l + +e+E +
  EPX73224.1 198 LENtKETEAL 207
                 8887777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (271 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       426  (0.0237604); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1915.63
//
Query:       EPX73225.1  [L=313]
Description: ribokinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.9e-70  236.6   0.3    4.3e-70  236.4   0.3    1.0  1  PfkB          pfkB family carbohydrate kinase
    2.2e-08   33.8   0.2    3.3e-08   33.2   0.2    1.2  1  Phos_pyr_kin  Phosphomethylpyrimidine kinase
  ------ inclusion threshold ------
       0.18   11.7   0.0       0.33   10.9   0.0    1.6  1  TNF           TNF(Tumour Necrosis Factor) family


Domain annotation for each model (and alignments):
>> PfkB  pfkB family carbohydrate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  236.4   0.3   7.2e-74   4.3e-70       3     301 ..       3     304 ..       1     305 [. 0.95

  Alignments for each domain:
  == domain 1  score: 236.4 bits;  conditional E-value: 7.2e-74
                 EEEEEEEEEEEEEEECSSH...TTSEE.EESEEEEEEESHHHHHHHHHHHTT....-EEEEEEEEESSHHHHHHHHHHHHTTEEETTEEEESSSEEEEE CS
        PfkB   3 kvvviGealidliavsekl...egelv.evktveksaGGagaNvAvalarlg....advafigavGdDnfGeflleelkkegvdtdyvkidedtrtgla 93 
                 +++v+G++++dl+  ++ +    +  + e   ++ +aGG+gaN+Ava+arl      +v + g+vG D fG+++l+ lk+++vd++ vk+ ++++ g+a
  EPX73225.1   3 NILVLGSLNMDLVMQTKFCpagGQTMHgEPDGFHTGAGGKGANQAVAVARLSnpsdTRVCMTGCVGEDVFGQDMLRGLKQDNVDVEAVKVIPNKSSGVA 101
                 799************9999*98666778**************************9999***************************************** PP

                 EEEETTTSEEEEEEEEGGGGGHHHHHHHHHHHHHGCTSEEEEESEECTTSHHHHHHHHHHHHHHTTEEEEEECESSSHHHHHHHHHHHCTESEEEEEHH CS
        PfkB  94 livvdedgertivfnrgaaadltkeeleededlleeadllyisgllsselpeavleelaeaaknggtfdpnlldplgaqfkeallellaladllkpnee 192
                 +i+v+++ge+ i+  +ga++    + +ee e++++++dll +      e+p  +++++ e+a++++  + +ll+p++a   +   ell+++++l pne+
  EPX73225.1 102 MIIVESNGENRILLSEGANSCVNVSFVEELEEKIQHSDLLILQ----LEIPLPSVQKAVELAHKHK--VDVLLNPAPA--ISLSVELLQHVSYLVPNEH 192
                 ************************8777888888888888666....5******************..*********5..9****************** PP

                 HHHHHHTSCT..HSHHHHHHHHHHHHHTTS.SEEEEEEGGGEEEEEETTEEEEEEE.SSSS-SBGTTHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH CS
        PfkB 193 Elealtgekl..edieealaalhklkakga.ktvvvtlGkeGalvvekdgelkvpavpkvkvvDttGAGDsfvggflaallegksleealrfanavAal 288
                 E++ l+g ++   +++ a +++ kl+a g+ k v++tlG+eGa++++k g + + +++kv+++Dtt+AGD+f+g+f+ +++++k+l+e+l+fa + +a+
  EPX73225.1 193 EAAVLLGCPDtpPTVQTAEEYADKLLAMGIqKAVIITLGSEGAFYKTKAGDSAHIPAQKVQPIDTTAAGDTFIGAFATSISHNKPLKESLQFAARSSAI 291
                 ************9**********************************7777766666****************************************** PP

                 HHTSSSSSTCSCC CS
        PfkB 289 vvqkkgaiaslpt 301
                 +vq+kga++s+pt
  EPX73225.1 292 TVQRKGAANSIPT 304
                 **********997 PP

>> Phos_pyr_kin  Phosphomethylpyrimidine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.2   0.2   5.6e-12   3.3e-08     102     226 ..     166     287 ..     149     301 .. 0.85

  Alignments for each domain:
  == domain 1  score: 33.2 bits;  conditional E-value: 5.6e-12
                   SBSSHHHHHHHHHHTGGG-SEEE-BHHHHHHHHT..---SSHHHHHHHHHHHHHTT.-SEEEEEEGGS-SSSEEEEEEEETSSEEEEEEEE----S- CS
  Phos_pyr_kin 102 elleeeavealkeeLlplatvitPNlpEaeaLlg..ekikteedmkeaakkllklg.akaVlikGghlegeeavvtdvlydgeeveeleaerietkn 195
                    ll++    +l  eLl++++ ++PN  Ea++Llg   +  t+++++e a+kll++g +kaV+i+ g      a    +  + ++  +++a++++  +
    EPX73225.1 166 VLLNPAPAISLSVELLQHVSYLVPNEHEAAVLLGcpDTPPTVQTAEEYADKLLAMGiQKAVIITLGSE---GAF---YKTKAGDSAHIPAQKVQPID 256
                   56777777778888********************977777**************87256778887762...222...334888999999*****9** PP

                   -BTHHHHHHHHHHHHHHCTSSHHHHHHHHHH CS
  Phos_pyr_kin 196 thGtGCtlssaiaaelakgesleeAvkkAke 226
                   t  +G+t+  a a++++++++l+e+++ A +
    EPX73225.1 257 TTAAGDTFIGAFATSISHNKPLKESLQFAAR 287
                   *************************998865 PP

>> TNF  TNF(Tumour Necrosis Factor) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   5.6e-05      0.33      48     126 ..     177     269 ..     124     270 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 5.6e-05
                 EEEEEEEEEEEESSTSSEEEEEEEEEEECCSSSCSE..............EEEEEEEEEEEEE-TTEEEEEEESCGGGBEESETTTSEEEEEE CS
         TNF  48 svsltlevlkakssypkkelLlkaaesscssedsey..............wlqsiylgglfeLkagdrvsvnvsnpslvdlseegktfFGafl 126
                 sv+l ++v+ + ++  + ++Ll + +++ +++++e+               ++  + g++ + kagd+  +  ++++ +d+++ g+tf Gaf+
  EPX73225.1 177 SVELLQHVSYLVPNEHEAAVLLGCPDTPPTVQTAEEyadkllamgiqkavIITLGSEGAFYKTKAGDSAHIPAQKVQPIDTTAAGDTFIGAFA 269
                 6788888888888877888888888888888888878999999999988888888999999*******************************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (313 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       442  (0.0246528); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 2127.39
//
Query:       EPX73226.1  [L=253]
Description: hypothetical protein SOCG_00981 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.025   13.4   8.7        2.4    6.8   8.8    2.0  1  DUF2207   Predicted membrane protein (DUF2207)
        0.2   10.9   4.1       0.76    8.9   0.4    2.0  2  7tm_7     7tm Chemosensory receptor
        7.8    6.9  12.1          7    7.0   3.6    2.1  2  MgtE      Divalent cation transporter


Domain annotation for each model (and alignments):
>> DUF2207  Predicted membrane protein (DUF2207)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   8.8   0.00041       2.4     335     445 ..      28     142 ..       2     218 .. 0.74

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.00041
     DUF2207 335 s......lkeikkyakkskkkakkfkkalkkwksavkk...kergyfdkkgkkklkklsalglgliilglilillallllvlllvfllilllillliai 424
                 s       ++++k+++++     + +++ ++ ++++++    +++++++     + +l ++ +++ i++l+++++ +++ ++  +f+++ ++ +++i++
  EPX73226.1  28 SegtpppYSASNKFIDLEM-ADGSAQNFAQESANNIRSdpsPNKQWWKTP---VIGTLTIITIIYNIVFLVIVFGYNVSPYS-KSFYGLAVVSIGFISV 121
                 2455555445555555544.566666666666666777777677777777...78888888888888888888888888888.9999999999999999 PP

     DUF2207 425 ivlllfsrllgrr.teeGaell 445
                 ++l+++++  + +  + G++ +
  EPX73226.1 122 LFLAILYI-YPEWyRQAGRATK 142
                 99999955.5554355555443 PP

>> 7tm_7  7tm Chemosensory receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.4   0.00013      0.76     247     327 ..      81     160 ..      73     163 .. 0.75
   2 ?    2.5   0.2     0.012        70      67     117 ..     188     238 ..     186     244 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00013
       7tm_7 247 ssfinitvllyylysslle....esslftllvfvlwllifllllvlivyacnlisneakktalllrrlnlrlkdsrlersiekFl 327
                  + i+i++++ +l++ +++    +s++f+ l +v   +i +l+l ++ ++ +  ++ ++ t + l     ++++++++++i+kF+
  EPX73226.1  81 LTIITIIYNIVFLVIVFGYnvspYSKSFYGLAVVSIGFISVLFLAILYIYPEWYRQAGRATKKVL-----KKSGRATKKCIKKFT 160
                 33444444444444444446666778888888888888888888899999999999999999999.....888999999999996 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.012
       7tm_7  67 evvynlqlvlglltvlvillsllfqrrrlarllnellkldrrlkrlgnrrn 117
                 e+++ +  ++ l+++ ++l+ ll++ + +++ l+++ +l++r +r+g+ rn
  EPX73226.1 188 EYIHSTAVLVVLAVLNICLFVLLIRNPDFVEDLHDMTRLNNRIRRHGSPRN 238
                 566777778888888899999999999999999999999999999998876 PP

>> MgtE  Divalent cation transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   3.6    0.0012         7      33      85 ..      70     128 ..      55     138 .. 0.63
   2 ?    5.1   1.3    0.0048        29      31      85 ..     148     211 ..     136     217 .. 0.57

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0012
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-........CTSHHHHHHHHHHHHHHHHHH CS
        MgtE  33 kkvllkelrvvlllgvilgllifllalllgw.......slllalvvglalvlvllaaall 85 
                 k+ + ++++  l++++i+  ++fl+++ +g        s++ ++vv++ ++ vl++a+l+
  EPX73226.1  70 KQWWKTPVIGTLTIITIIYNIVFLVIV-FGYnvspyskSFYGLAVVSIGFISVLFLAILY 128
                 444555666666677777777776644.44457667655555556777777777766665 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.0048
                 G..HHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHT-.......CTSHHHHHHHHHHHHHHHHHH CS
        MgtE  31 k..lkkvllkelrvvlllgvilgl.lifllalllgw......slllalvvglalvlvllaaall 85 
                 +  + k ++k+++ ++++++i+ + l+++  ++l         +  a++v la++ ++l+++l+
  EPX73226.1 148 SgrATKKCIKKFTPAVCKALIILIsLNGVGGYVLKLaggfeyIHSTAVLVVLAVLNICLFVLLI 211
                 3445777888888777777775440444445543334455544444555666666666665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (253 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1103  (0.0615204); expected 358.6 (0.02)
Passed bias filter:                      638  (0.0355848); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 1877.12
//
Query:       EPX73227.1  [L=262]
Description: hypothetical protein SOCG_00982 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.064   12.7   2.7      0.089   12.3   2.7    1.2  1  DUF1129        Protein of unknown function (DUF1129)
          1    9.2   5.0       0.49   10.2   3.0    1.5  1  FA_desaturase  Fatty acid desaturase
        3.4    7.8  13.6         11    6.2  13.6    1.8  1  DUF4870        Domain of unknown function (DUF4870)


Domain annotation for each model (and alignments):
>> DUF1129  Protein of unknown function (DUF1129)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   2.7   1.5e-05     0.089     112     190 ..     117     196 ..      76     203 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.5e-05
     DUF1129 112 GlitlllvalvgGlam..vlvyrlltrekkkkkrpplwkrllilllllvvwlvlftlvallpaviNpvLpplvliiigvia 190
                  l   +++++++ + +   +++ ++ +   k++ + +++++++++l++v++ ++ ++ +ll  +i   +p + + ii ++ 
  EPX73227.1 117 RLSFCFIISVMVDFWFsyKYLVPFIRE-SMKESVRLWFQITVAAVLVIVAFYMFLYVCSLLVDFIVILIPLVLTEIISALG 196
                 344455555555444400344444443.44555556667777777777777777778888888888888888888888765 PP

>> FA_desaturase  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   3.0   8.2e-05      0.49     104     180 ..     125     197 ..      96     233 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 8.2e-05
  FA_desaturase 104 lvlg..wllalvlglwlrrlarrrapsksrrrkwrllawlllllawlglwlalllllglall..lwlvplllllfllalvl 180
                     v+   w+       +++ +   r+++k++ r w  ++++++l+  +++++++l++ +l++   ++l+pl+l  ++ al +
     EPX73227.1 125 SVMVdfWFS------YKYLVPFIRESMKESVRLWFQITVAAVLV--IVAFYMFLYVCSLLVDfiVILIPLVLTEIISALGF 197
                    333332322......66667777777777777788888888888..88888888888888778899999999888877766 PP

>> DUF4870  Domain of unknown function (DUF4870)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2  13.6    0.0019        11      23      88 ..     122     189 ..      66     201 .. 0.79

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0019
     DUF4870  23 iilPlvi..wllkkdksefvdeqgkea..lNFqislliysiilivlsllvligflllllllllllnlvlv 88 
                 +i+ +++  w+++k  ++f++e  ke+  l Fqi++  +++i+++ ++l ++++  l+ ++++l+ lvl+
  EPX73227.1 122 FIISVMVdfWFSYKYLVPFIRESMKESvrLWFQITVAAVLVIVAFYMFLYVCSL--LVDFIVILIPLVLT 189
                 444444333*****************9556899999988888887766666666..45555555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (262 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1256  (0.0700541); expected 358.6 (0.02)
Passed bias filter:                      627  (0.0349713); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.30s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 1724.80
//
Query:       EPX73228.1  [L=264]
Description: ubiquitin-protein ligase E3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-09   38.3   6.8      2e-09   37.6   6.8    1.4  1  zf-RING_2     Ring finger domain
    6.7e-07   29.1   3.8    1.2e-06   28.2   3.8    1.5  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
      1e-06   28.5   7.6    1.7e-06   27.8   7.6    1.3  1  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
    1.3e-06   28.6   3.6    2.4e-06   27.7   3.6    1.4  1  zf-rbx1       RING-H2 zinc finger domain
    3.6e-06   26.7   5.7    6.9e-06   25.8   5.7    1.5  1  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
    0.00029   20.7   7.2    0.00048   19.9   7.2    1.3  1  Prok-RING_4   Prokaryotic RING finger family 4
      0.007   16.3   5.3      0.014   15.4   5.3    1.5  1  zf-RING_5     zinc-RING finger domain
  ------ inclusion threshold ------
      0.097   11.6   0.0       0.14   11.1   0.0    1.2  1  Csc2          Csc2 Crispr
       0.16   12.0   2.7       0.16   12.0   0.7    2.1  2  zf-RING_UBOX  RING-type zinc-finger
       0.18   11.9   2.8       0.33   11.0   2.8    1.4  1  zf-ANAPC11    Anaphase-promoting complex subunit 11 RING-H2 f


Domain annotation for each model (and alignments):
>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.6   6.8   1.1e-12     2e-09       2      44 .]      27      68 ..      26      68 .. 0.87

  Alignments for each domain:
  == domain 1  score: 37.6 bits;  conditional E-value: 1.1e-12
   zf-RING_2  2 eCpICleelssadsvlllpCgHv.fhreClerwlrssstCPlCr 44
                 C+ICle+  ++++++l pC+H  f++eC+++wl++s tCP+C+
  EPX73228.1 27 HCVICLER--DGRRAQLSPCQHDqFDYECIRQWLEKSLTCPICK 68
                6****954..46778888****77*******************7 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.2   3.8   6.9e-10   1.2e-06       1      41 []      28      67 ..      28      67 .. 0.98

  Alignments for each domain:
  == domain 1  score: 28.2 bits;  conditional E-value: 6.9e-10
                -TTT-S--SS-E.E-TTS--.B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4  1 CpiCleeakepnelleCkHs.fCskCirkilksrkkvkCPlC 41
                C iCle      +l++C+H  f ++Cir++l+  k+ +CP+C
  EPX73228.1 28 CVICLERDGRRAQLSPCQHDqFDYECIRQWLE--KSLTCPIC 67
                9******************99***********..******** PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   7.6   9.2e-10   1.7e-06       3      48 ..      26      72 ..      24      74 .. 0.92

  Alignments for each domain:
  == domain 1  score: 27.8 bits;  conditional E-value: 9.2e-10
                SB-TTTSSS.BS-EEETTEEEEEE-HHHHHHHHHTT-B-TTT--B-- CS
  zf-C3HC4_3  3 eeCviCler.prnvvllpCgHlvlCeeCaekllkrkkkCpiCrrpie 48
                + CviCler  r + l pC+H  + +eC +++l+++ +CpiC+++++
  EPX73228.1 26 RHCVICLERdGRRAQLSPCQHDQFDYECIRQWLEKSLTCPICKQSVD 72
                68******9678899*****************************997 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   3.6   1.3e-09   2.4e-06      11      55 .]      25      68 ..      22      68 .. 0.85

  Alignments for each domain:
  == domain 1  score: 27.7 bits;  conditional E-value: 1.3e-09
     zf-rbx1 11 eeacieckapgdeecpvvlGeCgH.aFHlhCiskWlktrkvCPlcr 55
                 ++c+ c + + +     l+ C+H +F  +Ci++Wl+++ +CP+c+
  EPX73228.1 25 RRHCVICLERDGR--RAQLSPCQHdQFDYECIRQWLEKSLTCPICK 68
                5678888777666..788999***66*******************6 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   5.7   3.9e-09   6.9e-06       2      40 .]      28      67 ..      27      67 .. 0.95

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 3.9e-09
  zf-C3HC4_2  2 CpiCldmlkdpsvvtpCgH.vfCqkCilrsLeekneCPlC 40
                C iCl++      + pC+H +f ++Ci+++Le++  CP+C
  EPX73228.1 28 CVICLERDGRRAQLSPCQHdQFDYECIRQWLEKSLTCPIC 67
                *******999999******779****************** PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   7.2   2.7e-07   0.00048       1      41 [.      28      72 ..      28      74 .. 0.88

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 2.7e-07
  Prok-RING_4  1 CvlCgeq.ekkailepCgHl.vCkeCfdsk.dls.sCPlCqrris 41
                 Cv+C e+ ++ a l+pC+H  +  eC  ++ + s +CP+C++ ++
   EPX73228.1 28 CVICLERdGRRAQLSPCQHDqFDYECIRQWlEKSlTCPICKQSVD 72
                 ****988578899******99*********85557******9875 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   5.3   7.7e-06     0.014       1      44 []      27      69 ..      27      69 .. 0.93

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 7.7e-06
   zf-RING_5  1 hCnkCfeklskeekfyltsCgHi.fCekClkkllekeavCpiCrk 44
                hC +C e+    +++ l +C+H  f  +C+++ lek+ +CpiC++
  EPX73228.1 27 HCVICLERD--GRRAQLSPCQHDqFDYECIRQWLEKSLTCPICKQ 69
                9******99..9**********74888****************97 PP

>> Csc2  Csc2 Crispr
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   7.8e-05      0.14      94     147 ..      66     114 ..      48     131 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 7.8e-05
        Csc2  94 sckkcpDcilYGfAigdsgsekskvvtddAfsllayeesveeftlnavfetGtm 147
                  ck+++Dc++YGf     gs ksk +    +  ++ ++ +++ +  +   +Gt+
  EPX73228.1  66 ICKQSVDCVYYGFT----GSGKSKKWYPHSYLSRPNKQQIKQASSSSTS-QGTI 114
                 59***********5....8889999999999888888888777665554.5665 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.7   9.1e-05      0.16       1      39 []      28      65 ..      28      65 .. 0.78
   2 ?    4.1   0.5     0.026        46       1       7 [.      64      70 ..      64      76 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 9.1e-05
  zf-RING_UBOX  1 CpIClelftdP.lvl.pCGH.tFCreClwelskslegafkCP 39
                  C ICle   +    l pC+H  F  eC+   +++le++++CP
    EPX73228.1 28 CVICLERDGRRaQ-LsPCQHdQFDYECI---RQWLEKSLTCP 65
                  8899985553322.338***66******...9*********9 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.026
  zf-RING_UBOX  1 CpIClel 7 
                  CpIC+++
    EPX73228.1 64 CPICKQS 70
                  *****97 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   2.8   0.00019      0.33      50      81 ..      42      71 ..      25      74 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00019
                BTTS-.EEEHHHHHHHHHHHSTSSB-TTTSSB- CS
  zf-ANAPC11 50 Gkckh.nfhlhcilkwletetskglcpmcrqtf 81
                  c+h +f   ci +wle++     cp+c+q++
  EPX73228.1 42 SPCQHdQFDYECIRQWLEKSL---TCPICKQSV 71
                5698856999*******9875...7******86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       694  (0.0387082); expected 358.6 (0.02)
Passed bias filter:                      529  (0.0295053); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 1775.73
//
Query:       EPX73229.1  [L=155]
Description: ribosomal protein subunit L13 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-47  161.2   0.0    1.5e-47  160.9   0.0    1.0  1  Ribosomal_L13  Ribosomal protein L13


Domain annotation for each model (and alignments):
>> Ribosomal_L13  Ribosomal protein L13
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  160.9   0.0   8.6e-52   1.5e-47       2     122 ..      16     137 ..      15     139 .. 0.98

  Alignments for each domain:
  == domain 1  score: 160.9 bits;  conditional E-value: 8.6e-52
                    EEEEEETTSBHHHHHHHHHHHHHTTTSTT--TTS--S-EEEEEEGGCBB-SSTHHTT-EEEEE-SSTTSEEEEEHHHHHCCSH.HHHHHHHHHCCS CS
  Ribosomal_L13   2 WyviDAegqvlgrlaskiakvLrGkhkptytphvdcGdyvvvinaekvaltgkkleqkvyyrhtgypgglkevtakellekkp.eeilekaVkgmL 96 
                    W++++A+g +lgrlas+ia +L+Gkhkp+++p++dcGd+vvv+++e+++++g+kleq++yy+h+g+pg+lke t++e+++k+  +e+l++aV gmL
     EPX73229.1  16 WHHVSAKGIPLGRLASNIAITLMGKHKPIFHPAADCGDVVVVTDCENIRISGRKLEQHKYYSHSGRPGKLKEWTMEEMVKKRGyRELLRRAVGGML 111
                    *******************************************************************************998779*********** PP

                    -SSHHHHHHGCTEEEESSSTTSGGGG CS
  Ribosomal_L13  97 pknklgrrrlkrLkvyageehpheaq 122
                    pkn+l + r++rL++y+g++hp++a+
     EPX73229.1 112 PKNRLWDMRMNRLHIYDGPTHPYKAN 137
                    **********************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       345  (0.0192426); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.41
# Mc/sec: 1127.04
//
Query:       EPX73230.1  [L=349]
Description: MSP domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.7e-24   85.8   0.1    3.2e-24   84.9   0.1    1.5  1  Motile_Sperm  MSP (Major sperm protein) domain


Domain annotation for each model (and alignments):
>> Motile_Sperm  MSP (Major sperm protein) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.9   0.1   1.8e-28   3.2e-24       3     106 ..       2     107 ..       1     110 [. 0.92

  Alignments for each domain:
  == domain 1  score: 84.9 bits;  conditional E-value: 1.8e-28
                   EEESSSEEEEESSTSSHEEEEEEEEE-SSSSEEEEEEES-TTTEEEESSEEEETTTCEEEEEEEEESSSSSTTSTC..CEEEEEEEEES-TT-STHH CS
  Motile_Sperm   3 kidPsdllvfaaelnkqgtsklklkNtskkrvaFkvkttapkkyrvrPnvGiikpgesveitvtlkpldeepsekk..kdkfviqylevpgdekdek 97 
                   +id s +l+f ++++ ++++ ++++N++ ++v Fkvkttapk+y+vrPn+G i++++sv+++v l++ +e p+++   +dkf+iq++ + +++++  
    EPX73230.1   2 SIDCSGELYFYPPFTTMSKELISVYNPHPEPVIFKVKTTAPKQYCVRPNSGKIDAKSSVNVQVLLQAMKEDPPSDFkcRDKFLIQSMAIGNQSTEGV 98 
                   57778899***********************************************************99888665368******************* PP

                   HHHHHHHHH CS
  Motile_Sperm  98 eafkeawkk 106
                   e  +++w +
    EPX73230.1  99 ENYQDFWAE 107
                   *99999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (349 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       481  (0.026828); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2492.24
//
Query:       EPX73231.1  [L=217]
Description: hypothetical protein SOCG_00986 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     0.0058   16.9   0.2      0.019   15.2   0.0    1.8  2  MAP17         Membrane-associated protein 117 kDa, PDZK1-inte
  ------ inclusion threshold ------
        0.1   12.6   6.4       0.16   11.9   6.4    1.2  1  DUF4614       Domain of unknown function (DUF4614)
       0.12   13.2   0.2       0.84   10.6   0.0    2.2  2  EphA2_TM      Ephrin type-A receptor 2 transmembrane domain
       0.21    9.9  11.0       0.26    9.6  11.0    1.1  1  RAP1          Rhoptry-associated protein 1 (RAP-1)
       0.37   11.8   5.1          4    8.5   0.0    2.4  2  DUF4834       Domain of unknown function (DUF4834)
        7.6    4.8  13.5         12    4.1  13.5    1.4  1  DUF515        Protein of unknown function (DUF515)


Domain annotation for each model (and alignments):
>> MAP17  Membrane-associated protein 117 kDa, PDZK1-interacting protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1      0.87   2.6e+03      83      84 ..      71      72 ..      48     104 .. 0.45
   2 !   15.2   0.0   6.5e-06     0.019      35      81 ..     161     203 ..     153     213 .. 0.67

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.87
       MAP17 83 ke 84
                ++
  EPX73231.1 71 SS 72
                11 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 6.5e-06
       MAP17  35 liAvvgFLflvfvlllvnrvWcskaraedeeeetfrmeankeedvsl 81 
                 +  +vg +f+ +++++v r+W  +  a++ +  +++++++ ++d+++
  EPX73231.1 161 V--IVGSIFILAIVMVVARIWGPRLLANKRN--NQESNGDFQDDTEV 203
                 3..58999*************9885555544..44444444444333 PP

>> DUF4614  Domain of unknown function (DUF4614)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   6.4   5.5e-05      0.16      14      99 ..      54     143 ..      46     150 .. 0.52

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 5.5e-05
     DUF4614  14 sesessssssessssrslssssesslssksssstdsksssqssestkkrskt...ktrttvketavqTsdpalayqwtk...aagvaalgpa 99 
                 s s+ssssss+ss+++s+s +++ss s+  s+s+ s +ss++ + ++  + +    + +t++ t+v T+  ++++ +++   ++g+a l p+
  EPX73231.1  54 SVSDSSSSSSSSSNQKSSSGKTSSSISDIISTSDASGTSSRTIHNKN--ATNgfiTEYVTIQPTTVMTTIFQYTSLASTipaQSGLASLVPQ 143
                 44444555555555555555555555555555555544444444322..2223456677777777777744444433333327777777776 PP

>> EphA2_TM  Ephrin type-A receptor 2 transmembrane domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.1      0.43   1.3e+03      12      38 ..       8      57 ..       3     104 .. 0.50
   2 ?   10.6   0.0   0.00028      0.84       1      37 [.     157     193 ..     157     213 .. 0.72

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.43
    EphA2_TM 12 lvilvilvlvlvrrrsknrkqksdl.............k..........s 38
                l+++  l ++++  ++++r + s++                        +
  EPX73231.1  8 LLCIFHLKVFFLAAKASSRLSLSSPirkqdvfttlsptLvrragsvsvsD 57
                44444444444444444444444333333333333222022223333330 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00028
    EphA2_TM   1 iiaaavaglvllvilvilvlvlvrrrsknrkqksdlk 37 
                 i++++++g ++++++v++v  ++  r   +k++++++
  EPX73231.1 157 ILVGVIVGSIFILAIVMVVARIWGPRLLANKRNNQES 193
                 68999****************9998888887777652 PP

>> RAP1  Rhoptry-associated protein 1 (RAP-1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6  11.0   8.5e-05      0.26     128     183 ..      38      94 ..      31     126 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 8.5e-05
        RAP1 128 vvktskpkststeslksssdskskasaksnvksaskyGessssee.satdsskasas 183
                 v  t  p   +  +  s sds+s++s+ sn ks+s    ss s+  s+ d+s +s+ 
  EPX73231.1  38 VFTTLSPTLVRRAGSVSVSDSSSSSSSSSNQKSSSGKTSSSISDIiSTSDASGTSSR 94 
                 4566677888888999***************************96366676666663 PP

>> DUF4834  Domain of unknown function (DUF4834)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   2.4     0.043   1.3e+02      34      87 ..      47      99 ..       3     110 .. 0.49
   2 ?    8.5   0.0    0.0013         4       5      48 ..     155     199 ..     152     215 .. 0.60

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.043
     DUF4834 34 srkkssksaqkqfgnstnsnqqksqsrsetkeegeiieeersekeakrkkiFek 87
                 r+ +s s+++++++s +s++qks+s +++++  +ii++++ +  ++r  i +k
  EPX73231.1 47 VRRAGSVSVSDSSSSSSSSSNQKSSSGKTSSSISDIISTSDASGTSSR-TIHNK 99
                344444555555555555555555555555555555555444443333.44444 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0013
     DUF4834   5 lfilifiiailviglsilsvilrtvfg...lgsrkkssksaqkqfgn 48 
                   il+ +i+  ++ l+i++v+ r   g   l +++++ ++ + +f+ 
  EPX73231.1 155 IGILVGVIVGSIFILAIVMVVARIW-GprlLANKRNN-QESNGDFQD 199
                 5588999999999999999999887.54432222222.222222222 PP

>> DUF515  Protein of unknown function (DUF515)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1  13.5     0.004        12     305     369 ..      49      80 ..      21     112 .. 0.61

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.004
      DUF515 305 eagsisvSEsqsqsssvseesstsssessstsespGdvsisdsssasdsssvsqstseslsssis 369
                  ags+svS+s s ss                                 sss+ +s+s  +sssis
  EPX73231.1  49 RAGSVSVSDSSSSSS---------------------------------SSSNQKSSSGKTSSSIS 80 
                 455555555555554.................................44444444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1309  (0.0730102); expected 358.6 (0.02)
Passed bias filter:                      517  (0.028836); expected 358.6 (0.02)
Passed Vit filter:                        85  (0.00474092); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 1511.59
//
Query:       EPX73232.1  [L=365]
Description: prohibitin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-27   96.9   0.1    2.7e-27   95.9   0.1    1.5  1  Band_7    SPFH domain / Band 7 family
    1.9e-26   91.9   0.6    4.4e-26   90.7   0.6    1.7  1  Band_7_C  C-terminal region of band_7
  ------ inclusion threshold ------
      0.024   14.7   3.0       0.05   13.6   3.0    1.5  1  DUF2514   Protein of unknown function (DUF2514)
       0.13   11.9   0.2       0.38   10.4   0.0    1.8  2  Band_7_1  SPFH domain-Band 7 family
       0.23   11.8   2.5       0.55   10.6   0.2    2.5  2  PE        PE family


Domain annotation for each model (and alignments):
>> Band_7  SPFH domain / Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.9   0.1   7.4e-31   2.7e-27       3     176 ..      58     226 ..      56     238 .. 0.96

  Alignments for each domain:
  == domain 1  score: 95.9 bits;  conditional E-value: 7.4e-31
      Band_7   3 ieegevgvvvrfGklsrvlepGlhfilPfgrsvt.vvsvrvqtldvsvsltvptkDglpvtidvtviyrvpddapklvaaveresanldnlirrvlesa 100
                 ++++ ++vv+r G+ sr+l+pG+ f +P  +++  + s++ + l+++  ++++t D++++++d++++++v  d++k+++ v    ++ d  i+++++ +
  EPX73232.1  58 VPQQMAYVVERMGRFSRILNPGIAFLIPVADKISyIHSLKERALEIPT-QSAITLDNVSIGLDGILYVQV-YDPFKASYGV----EDADYAISQLAQTT 150
                 78999***********************9999998999**********.*********************.**********....************** PP

      Band_7 101 lrevisemtleellsnreelaeelknelneqlrkyGvevldvritdidpppevaqalaakqaaeaeaqaeiaraea 176
                  r+ i+++tl+ +l++r+ l+e + +++n++ + +G+ +l+  i+di+pp+ v  ++++   ae++++aei  +e+
  EPX73232.1 151 MRSEIGRLTLDHVLRERQSLNEHISDAINKASENWGIRCLRHEIRDIRPPESVVMSMHQQVSAERQKRAEILASEG 226
                 *******************************************************************999877665 PP

>> Band_7_C  C-terminal region of band_7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.7   0.6   1.2e-29   4.4e-26       3      63 .]     278     339 ..     276     339 .. 0.95

  Alignments for each domain:
  == domain 1  score: 90.7 bits;  conditional E-value: 1.2e-29
    Band_7_C   3 vaeaikkp.ggqeAvsLrvAeqYveaFgkLAkesntvilPanvgdvssmvaqalsiykkvsk 63 
                 +++ i+++ +g++Av+L vAeqY + FgkLAk+snt+ilPa ++d+ssmvaqalsiyk+vsk
  EPX73232.1 278 LSDMISQKdHGTDAVNLHVAEQYLKNFGKLAKTSNTMILPAAANDISSMVAQALSIYKQVSK 339
                 677888888**************************************************985 PP

>> DUF2514  Protein of unknown function (DUF2514)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   3.0   1.4e-05      0.05      56     133 ..     213     287 ..     196     300 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.4e-05
     DUF2514  56 qrrkaaaekavkdaqekaaaAradavgaaaaadrLrqeaakLaaaksavaadsaaaargkaaaraavvLadlLsraae 133
                  +r++ ae  +++++++ a+  a+    + +a+ L +e +k+   ++a+a+ +a+ +r+ a a+ ++vL+d++s+ ++
  EPX73232.1 213 AERQKRAEILASEGRRQSAINVAEG---DKQAEILDSEGQKIRIINAALAEAQAIRERAFATAKGIDVLSDMISQKDH 287
                 5677777777888888776665554...557788999999999999999************************99775 PP

>> Band_7_1  SPFH domain-Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00011      0.38     143     209 ..     144     213 ..     137     215 .. 0.82
   2 ?   -1.9   0.0      0.64   2.3e+03     127     174 ..     286     331 ..     271     338 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00011
    Band_7_1 143 trlsdvlaeskipvldlaa...kseelaeklkealkeelaeyGlelekleienislpeevekaldkrasm 209
                 ++l+++ + s+i+ l l+    + ++l e++++a++++ ++ G+ + + ei++i  pe+v   +++++s+
  EPX73232.1 144 SQLAQTTMRSEIGRLTLDHvlrERQSLNEHISDAINKASENWGIRCLRHEIRDIRPPESVVMSMHQQVSA 213
                 56777777777777666542226788**********************************9999998875 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.64
    Band_7_1 127 efdteeiseqlkslivtrlsdvlaeskipvldlaakseelaeklkeal 174
                 +  t+ ++ ++ ++ +++++++ ++s+  +l  aa+  ++++++++al
  EPX73232.1 286 DHGTDAVNLHVAEQYLKNFGKLAKTSNTMILPAAAN--DISSMVAQAL 331
                 556788888888888888999888888877665554..5666666554 PP

>> PE  PE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.2      0.26   9.2e+02      10      53 ..     243     284 ..     239     310 .. 0.66
   2 ?   10.6   0.2   0.00015      0.55      25      60 ..     301     336 ..     289     347 .. 0.79

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.26
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH----SSSSHHHHHHHH CS
          PE  10 alaaaaadlagigsalsaanaaaaapttavlaaaaDeVSaaiAa 53 
                 +l +  +++  i++al++a+a  + + +   a + D  S +i++
  EPX73232.1 243 ILDSEGQKIRIINAALAEAQAIRERAFA--TAKGIDVLSDMISQ 284
                 4555556666777777777776666665..56666666666665 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00015
                 HHHHHHHHHHHHH----SSSSHHHHHHHHHHHHHHH CS
          PE  25 lsaanaaaaapttavlaaaaDeVSaaiAalfsahaq 60 
                 l+   + a  + t++l+aaa ++S ++A+++s + q
  EPX73232.1 301 LKNFGKLAKTSNTMILPAAANDISSMVAQALSIYKQ 336
                 55556667788899***************9987655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (365 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       689  (0.0384294); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 2540.24
//
Query:       EPX73233.1  [L=354]
Description: phosphoribosylanthranilate transferase Trp4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.9e-80  269.1   0.0    4.7e-80  268.8   0.0    1.1  1  Glycos_transf_3  Glycosyl transferase family, a/b domain
    1.3e-09   37.7   0.0    2.5e-09   36.8   0.0    1.4  1  Glycos_trans_3N  Glycosyl transferase family, helical bundle 


Domain annotation for each model (and alignments):
>> Glycos_transf_3  Glycosyl transferase family, a/b domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  268.8   0.0   5.3e-84   4.7e-80       2     252 ..      85     339 ..      84     340 .. 0.98

  Alignments for each domain:
  == domain 1  score: 268.8 bits;  conditional E-value: 5.3e-84
                      TTBEEEEESS-SSSTHHHHHHHHHHHHHHTT-BEEEEE-STCTTCS-HHHHHCTST--S.T--HHHHHHHHHHHSEEEEEHHSSSSHHHHHHHH CS
  Glycos_transf_3   2 kdlvDivgTGGdgantfNiStaaaivvAaaGvkvakhgnrsvssksGsaDvLealgvnl.eltpeeveklleevgvgflfapeyhkamkhvapv 94 
                      +++vDivgTGGdg+ntfN+Sta++i++A+aGv+v+khgn++++s+sGsaD+L ++g++l ++t++++ ++ +e++++flfap+ h+ +k vap+
       EPX73233.1  85 PKFVDIVGTGGDGHNTFNVSTASGIIAAGAGVHVCKHGNKASTSSSGSADLLMSFGCDLlNVTAKNLISITDESKFSFLFAPQCHPRLKIVAPI 178
                      689*******************************************************99********************************** PP

                      HHHHTT.-SSHHHCHHHHHT..SEEEEHHHHHHHHTCHSEEEEEEEESTTSSCCS.TSHHHHHHHHHHHHHHHHTTEEEEEEEEEGSSTSSSEE CS
  Glycos_transf_3  95 rrelgirTvfnlLGPLinparvkkqllgvyskelaeklaevlkelgveralvvhg.dGldevsllakttvaelkdgeiteytlepedfglkrae 187
                      r+e+g++++fnl+GPL+np+   ++++gv +++l++  a++l  lg  r+lvv+g +Glde+s+++ t+ + +kdg+it++ l+pe+f l r+ 
       EPX73233.1 179 RKEIGVPSIFNLVGPLLNPVPTYARIIGVSHPSLVPIFAQALLLLGADRSLVVCGeEGLDEISPAGPTHAWLVKDGQITQMILTPESFHLPRHP 272
                      ********************************************************************************************** PP

                      ESHHHHSSHHHHHHHHTTHHTSCHHHHH..HHHHHHHHHHHHHHTTSSSSHHHHHHHHHHHHHTSHH CS
  Glycos_transf_3 188 lealeggepkenaeilkavlegkksaak..rdlvllnagaalvlagkadslkegvakaeevidsGkA 252
                      l+++++g+p +na +l+++l++   + +  +d+vl+n++++l++ag a sl+egv  a+e+i s +A
       EPX73233.1 273 LSSVASGTPSANAVLLEKMLSNMLPKNHpvLDYVLMNTAMLLHVAGLAGSLHEGVLLAQESIASHAA 339
                      **********************87777777********************************99777 PP

>> Glycos_trans_3N  Glycosyl transferase family, helical bundle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.8   0.0   2.8e-13   2.5e-09       8      48 ..      17      58 ..      13      72 .. 0.86

  Alignments for each domain:
  == domain 1  score: 36.8 bits;  conditional E-value: 2.8e-13
                     HTT.---HHHHHHHHHHHHTTSS-HHHHHHHHHHHHHH-.-- CS
  Glycos_trans_3N  8 rdgeeLtaeeirfaihgilkgevtdaqiaAfLmAlrlkG.et 48
                     r g+e   +ei+faih+il+ + +++qi+AfL+A+rl++ e 
       EPX73233.1 17 RVGQEIPVNEIEFAIHDILQEKSNPVQIGAFLTAMRLTRvEQ 58
                     56789999*****************************99643 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (354 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       318  (0.0177366); expected 358.6 (0.02)
Passed bias filter:                      287  (0.0160076); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.46
# Mc/sec: 2311.32
//
Query:       EPX73234.1  [L=515]
Description: serine carboxypeptidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   3.6e-103  346.2   1.0   4.1e-103  346.0   1.0    1.0  1  Peptidase_S10  Serine carboxypeptidase
  ------ inclusion threshold ------
      0.029   13.6   0.0      0.054   12.7   0.0    1.4  1  Hydrolase_4    Serine aminopeptidase, S33


Domain annotation for each model (and alignments):
>> Peptidase_S10  Serine carboxypeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  346.0   1.0  4.6e-107  4.1e-103       1     418 [.      38     449 ..      38     450 .. 0.91

  Alignments for each domain:
  == domain 1  score: 346.0 bits;  conditional E-value: 4.6e-107
                    TTCSST-SSEEEEEEEECSTTTTEEEEEEEEE-SSGTTTS-EEEEE--TTTB-THHHHHHTTSSEEEETTTTSEEEE-TT-GGGCSEEEEE--STT CS
  Peptidase_S10   1 PgleetvnfkqysGYldveeeedkslFYwfveseknpeedplvlWLnGGPGCsSldGlleElGPfrvnkdstkkleenpysWnkvanvlfldqPvG 96 
                    Pg+ +  + ++ysG l  +e+ + +lF+w++es + +  +  ++WLnGGPGCsS dG l+E+GP+r+   ++ + ++n+  W+++ n+lf+dqP G
     EPX73234.1  38 PGIPDDYTQRMYSGNLGKDEQLNGDLFFWMFESANASFANRTIIWLNGGPGCSSEDGSLMEVGPLRMG--GNGTFHLNQGRWDELGNILFVDQPKG 131
                    778888899***********************************************************..789*********************** PP

                    STT-EETTSSGS--SHHHHHHHHHHHHHHHHHHSTCGTTSEEEEEEETTHHHHHHHHHHHHHTHCCH--SSTSEEEEEEEESE-SBHHHHHCCHHH CS
  Peptidase_S10  97 vGFSysntksdvktddeevaedlyefLkkffekfpeyksrdfyitGESYaGhyvPalakeilkknkkekkkkinLkGlligNglideaeqvnsyve 192
                    +GFSys +++ +++d++e+ae++  f++kf+++fpe +++++yi+GESYaG+y+P++a+++++k        + L Gl+igNg+i++ +++n+y++
     EPX73234.1 132 TGFSYSLDDD-YMSDNHEMAEEFSIFFEKFLAEFPERANDTWYISGESYAGQYIPYVASKLIEKD------LVRLGGLAIGNGWIQPISHYNTYLN 220
                    ******9966.69*************************************************998......689********************** PP

                    HHHHTTSSH..HHHHHHHHHHHEET...........HHHHHHHHHHHHHHHHHHHHHHHHH.CHCEETTETTSEETTSSEEHHHCTTCCCCTTTTT CS
  Peptidase_S10 193 fayehglis..eeeyeslkkacekk...........eeleqesekcanllekaskvaveke.nkglnvynileeccklkaelkksstdaqggedpy 274
                    +++e+g ++   e+ ++l++    +           ++ + + ekc+n+l ++  +  +k  n+++n+y+i  e+          s++ +g+++p 
     EPX73234.1 221 YLVEKGKLDlyTEQGQYLHH----SwadcmlaleqlQSGSGDVEKCENFLYDIMFMLSDKPgNTCMNMYDISLES----------SYPLCGMDWPA 302
                    ******99954444444444....2333467777777777777888888888877653332145**********9..........899******** PP

                    CHHHHHHHHTSHHHHHHTT--.TTSSS--SB-HHHHHHCTCCC-SBCHHHHHHHHHTT-EEEEEEETT-STT-HHHHHHHHHHTECTTECCSCCCE CS
  Peptidase_S10 275 desyvekylnkkeVrkalhvn.asvkkweecndsvfeqleddisksveeileellesglrvliynGdvDlicnvlgteawikklelsgkkefrpwe 369
                    + ++++ yl+k+eV +alhvn + vk+w+ec+++v++++ ++   s+ +++++l ++ +++++++G+ D++cn+l+ e+++k+le++g+ +f ++ 
     EPX73234.1 303 ELENLTPYLSKPEVLQALHVNtTYVKEWKECSNDVSNNYAREGIDSSANLIKDLASK-IPIMLFYGENDFLCNYLSGEDLLKSLEWNGEVGFGNAS 397
                    *********************999***********999999999*********9999.********************************999999 PP

                    EEE...TTTCESEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHHHHHHT CS
  Peptidase_S10 370 vsp...kkengqvaGyvkeyenltfltvkgaGHmvPedkpeealqllerfis 418
                    +s+    +++++ aG + + +nltf+++ +a+HmvP+d+p e+ +l   f++
     EPX73234.1 398 WSSwytGDSTDEPAGSYIQARNLTFARIAKASHMVPYDHPIEMKTLAAAFFD 449
                    98877778899999*9999*************************99998876 PP

>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   6.1e-06     0.054     162     217 ..     331     385 ..     311     390 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 6.1e-06
  Hydrolase_4 162 plvhgkitvrlllelldamkrleeraakitlPllllhGeaDkvvdpeasrelyerl 217
                  + ++++++++ ++e +d  ++l ++ a+ ++P++l++Ge+D ++++   ++l+++l
   EPX73234.1 331 KECSNDVSNNYAREGIDSSANLIKDLAS-KIPIMLFYGENDFLCNYLSGEDLLKSL 385
                  5689999**************9999985.6*****************999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (515 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       444  (0.0247643); expected 358.6 (0.02)
Passed bias filter:                      429  (0.0239277); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.30s 00:00:00.82 Elapsed: 00:00:00.45
# Mc/sec: 3443.69
//
Query:       EPX73235.1  [L=299]
Description: exosome subunit Rrp42 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-15   57.4   0.1    3.5e-15   56.7   0.1    1.4  1  RNase_PH    3' exoribonuclease family, domain 1
  ------ inclusion threshold ------
      0.055   13.5   0.0       0.42   10.7   0.1    2.2  2  RNase_PH_C  3' exoribonuclease family, domain 2


Domain annotation for each model (and alignments):
>> RNase_PH  3' exoribonuclease family, domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.7   0.1   3.9e-19   3.5e-15       1     132 []      31     161 ..      31     161 .. 0.77

  Alignments for each domain:
  == domain 1  score: 56.7 bits;  conditional E-value: 3.9e-19
                 EEEEEEEEESSSSTTSEEEEEEECC.EEEEEEEEEEEEEE-TCCG--CCEEEECCCCECCCCEC-C....S...HHHHHHHHHHHHHHCCTC-C...CG CS
    RNase_PH   1 elRslsietgvlsqanGSaylelGd.tkvlasvtgpieerpseerddaegaldveveyapfasgerrre.grpsdeeielsrlleralrpsill...ek 94 
                 +lR+ls + ++l+ a+GSa+++ G+ ++vl+++++++    +++    +ga+++ ve++p +++++r++ + ps+ + +l+++l+   +p++ l   + 
  EPX73235.1  31 QLRALSGQVNILPGAHGSARIKWGSsVEVLVGIKADVSD--ATI-H--GGAFEASVEVSPAVTTQNRETdHLPSSLTSALQDVLDA--LPVGYLkftPS 122
                 68**********************99***********65..233.3..689********999998854324455555555555554..45555544455 PP

                 CCTCEEEEEEEEEEC...CCS-CHHHCHHHHHHHHHCTCEE CS
    RNase_PH  95 kpkstididitvlss...dggslldalinaaslALadagip 132
                 k+ ++i++d+ v+     +  ++l+al++a+slAL++++ip
  EPX73235.1 123 KA-WKIHVDAIVMLCtipN-ENILSALSLATSLALQTTRIP 161
                 54.****998776552325.5*******************9 PP

>> RNase_PH_C  3' exoribonuclease family, domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1   4.6e-05      0.42       4      37 ..     204     237 ..     201     256 .. 0.84
   2 ?   -0.3   0.0      0.12   1.1e+03       3      26 ..     266     289 ..     264     293 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 4.6e-05
                 EEEEEEEETTEEEES--HHHHHHSSEEEEEEEET CS
  RNase_PH_C   4 iavtvgkvddqfvlDptkeEedlsegdltlavag 37 
                 + +tv+ vd  +++Dpt +E +++++   + v  
  EPX73235.1 204 VIITVSSVDQIILIDPTVDEANVAQATYAVGVLP 237
                 679*****************99999988888854 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.12
                 -EEEEEEEETTEEEES--HHHHHH CS
  RNase_PH_C   3 viavtvgkvddqfvlDptkeEedl 26 
                 ++ v v+ + ++ +lD++k+  ++
  EPX73235.1 266 ISLVQVASIAGTKLLDASKSLLAY 289
                 68899*************987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (299 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       291  (0.0162307); expected 358.6 (0.02)
Passed bias filter:                      254  (0.014167); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.28s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 2046.83
//
Query:       EPX73236.1  [L=193]
Description: BAG family molecular chaperone regulator Bag101 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      4e-16   59.2   2.4    8.1e-16   58.2   2.4    1.5  1  BAG           BAG domain
    8.4e-08   31.9   0.2    1.8e-07   30.8   0.2    1.6  1  ubiquitin     Ubiquitin family
    1.6e-05   25.2   0.7    1.6e-05   25.2   0.7    2.0  2  Ubiquitin_5   Ubiquitin-like domain
      3e-05   23.8   0.1    8.2e-05   22.4   0.1    1.7  1  Rad60-SLD     Ubiquitin-2 like Rad60 SUMO-like
     0.0071   16.5   0.1       0.03   14.6   0.1    2.0  2  TUG-UBL1      TUG ubiquitin-like domain
     0.0075   16.3   0.6      0.021   14.9   0.1    2.0  2  Ubiquitin_4   Ubiquitin-like domain
      0.008   15.4   0.4      0.014   14.6   0.4    1.4  1  HEPN_STY4199  STY4199-like HEPN
  ------ inclusion threshold ------
      0.016   15.8   0.2      0.032   14.8   0.2    1.7  1  DUF2407       DUF2407 ubiquitin-like domain


Domain annotation for each model (and alignments):
>> BAG  BAG domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.2   2.4   3.6e-19   8.1e-16       1      74 [.     108     186 ..     108     187 .. 0.91

  Alignments for each domain:
  == domain 1  score: 58.2 bits;  conditional E-value: 3.6e-19
                 HHHHHHHHHHH.HHHHHHHHHHH.......HHH..HHHHHHHHHHHHHHTCEESTHHHHHHHHHHHHHHHHHHHHHHHH CS
         BAG   1 Ideilkevetllepeveafektv.....kkekeylylsElLlklLlkLDsieiegdeeaRekRKeavkevqkllkklDs 74 
                 I++i + ++++l+p  +++  ++     kk k++l   ElLl++LlkLD++++ g e++R++RK++v ++qk+l+ +D+
  EPX73236.1 108 IQAIDNYINKDLTPIYNTYVHESfddkqKKTKQKLMAYELLLQQLLKLDGVDVMGSEKLRMNRKALVAKIQKMLDHVDE 186
                 899999999**9***999999999987655666677******************************************7 PP

>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   0.2     8e-11   1.8e-07       7      67 ..      13      74 ..       8      79 .. 0.86

  Alignments for each domain:
  == domain 1  score: 30.8 bits;  conditional E-value: 8e-11
                TSEEEEEEEETTSBHHHHHHHHHHHHTSSGGGEEEEETTEEE-TTSB.HGGHTTSTTEEEEE CS
   ubiquitin  7 dgkkitleveesdtveelKekiaekegipaeqqrLiysGkvLedert.leeygiqdgstlhl 67
                 ++ i ++v+ ++t+ ++ e + +k gi+ ++++L+y+Gk+L+d++t l+  g+++ s++ +
  EPX73236.1 13 GNQRIRMSVDLNETLGSFIEDLVQKAGIHEKKIKLFYAGKRLKDNNTsLSKFGLKNHSKILC 74
                566899************************************66655388889999999877 PP

>> Ubiquitin_5  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.7   6.9e-09   1.6e-05      31      95 ..      14      79 ..       2      82 .. 0.84
   2 ?   -1.4   0.4       1.3     3e+03      47      47 ..     160     160 ..     129     185 .. 0.54

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 6.9e-09
  Ubiquitin_5 31 ekkklletkLdvtgkelvskiaeefglkensiKlilngklleld.ktLeeQgvknnskvmvLklse 95
                 +++  + + L+ t    ++ + ++ g++e++iKl + gk l+ +  +L + g+kn+sk++ +k ++
   EPX73236.1 14 NQRIRMSVDLNETLGSFIEDLVQKAGIHEKKIKLFYAGKRLKDNnTSLSKFGLKNHSKILCIKPQK 79
                 56777888899999999************************875167*************998765 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1.3
  Ubiquitin_5  47 l 47 
                  +
   EPX73236.1 160 V 160
                  0 PP

>> Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.1   3.6e-08   8.2e-05       9      56 ..      13      59 ..       9      63 .. 0.96

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 3.6e-08
                SS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEEETTEE--TTSB CS
   Rad60-SLD  9 dgkevkikVkptttvskLieayrkkkgipeeqkvrLiFDGeeLdpnst 56
                ++++++++V+ ++t+   ie + +k gi e +k++L + G++L++n+t
  EPX73236.1 13 GNQRIRMSVDLNETLGSFIEDLVQKAGIHE-KKIKLFYAGKRLKDNNT 59
                689***************************.***************99 PP

>> TUG-UBL1  TUG ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.1   1.3e-05      0.03       1      62 [.      10      71 ..      10      73 .. 0.91
   2 ?    1.4   0.1      0.16   3.7e+02      24      37 ..      59      73 ..      57      85 .. 0.61

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1.3e-05
    TUG-UBL1  1 itynfrrfkvkvtpnttlndvLeeackkfklddsasytLkhnnkpl.dlslpfRlsnLpngak 62
                ++y+++r + +v  n tl   +e+ ++k ++  +++  L + +k l d +  +   +L n +k
  EPX73236.1 10 VHYGNQRIRMSVDLNETLGSFIEDLVQKAGI-HEKKIKLFYAGKRLkDNNTSLSKFGLKNHSK 71
                79*****************************.556***********99988888888888776 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.16
    TUG-UBL1 24 eackkfkldds.asy 37
                ++++kf+l+++ +  
  EPX73236.1 59 TSLSKFGLKNHsKIL 73
                578889996653333 PP

>> Ubiquitin_4  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.1   9.4e-06     0.021      55      84 ..      44      73 ..      41      77 .. 0.89
   2 ?   -3.3   0.0       4.3   9.6e+03      58      66 ..     173     181 ..     163     189 .. 0.51

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 9.4e-06
  Ubiquitin_4 55 tycLsfegekLkddkaklkeygirnksels 84
                 +  L++ g++Lkd++++l+++g++n+s++ 
   EPX73236.1 44 KIKLFYAGKRLKDNNTSLSKFGLKNHSKIL 73
                 5679**********************9986 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 4.3
  Ubiquitin_4  58 LsfegekLk 66 
                  L+++ +k++
   EPX73236.1 173 LVAKIQKML 181
                  333333333 PP

>> HEPN_STY4199  STY4199-like HEPN
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.4   6.3e-06     0.014      62     153 ..      51     154 ..      47     188 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 6.3e-06
  HEPN_STY4199  62 akrLklnDaelsqftlq.......LrhlqqlvPqyesgqevs..enqliaalrfvaaL...eklrekqplLtysteleesdeeqqlqakkqlralel 146
                   +krLk n++ ls+f l+       ++  ++  P+ e g++ +  e+q  a  r +  +   ++  +k     y+t ++es +++q+++k++l a el
    EPX73236.1  51 GKRLKDNNTSLSKFGLKnhskilcIKPQKKHLPEQETGEKTAqaEEQNPAYSRILGEIqaiDNYINKDLTPIYNTYVHESFDDKQKKTKQKLMAYEL 147
                   799***********987333322234456789******9875226788888888665500055566777778************************* PP

  HEPN_STY4199 147 tlkalia 153
                   +l++l++
    EPX73236.1 148 LLQQLLK 154
                   ****986 PP

>> DUF2407  DUF2407 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.2   1.4e-05     0.032      23      96 ..       7     101 ..       3     146 .. 0.72

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.4e-05
     DUF2407  23 tttvagLkqliRerl...............paelasrrLrLIyaGrlLedttslasslklpees......vsdkaekskekgkapvreqeeeriY 96 
                 ++tv+   q iR  +               +a +++++++L yaG+ L+d+ +  s+  l+++s       ++k  +++e+g+++++ +e++ +Y
  EPX73236.1   7 SVTVHYGNQRIRMSVdlnetlgsfiedlvqKAGIHEKKIKLFYAGKRLKDNNTSLSKFGLKNHSkilcikPQKKHLPEQETGEKTAQAEEQNPAY 101
                 56666666666666666666666666666778899**************8755444444443344688873344455555666666555665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1192  (0.0664845); expected 358.6 (0.02)
Passed bias filter:                      503  (0.0280551); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.46u 0.28s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 1324.81
//
Query:       EPX73237.1  [L=619]
Description: DNA topoisomerase III [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   1.3e-100  337.4   0.0   1.5e-100  337.1   0.0    1.1  1  Topoisom_bac  DNA topoisomerase
    5.2e-20   71.6   0.0      1e-19   70.7   0.0    1.5  1  Toprim        Toprim domain


Domain annotation for each model (and alignments):
>> Topoisom_bac  DNA topoisomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  337.1   0.0  1.7e-104  1.5e-100       3     412 ..     166     584 ..     164     585 .. 0.90

  Alignments for each domain:
  == domain 1  score: 337.1 bits;  conditional E-value: 1.7e-104
  Topoisom_bac   3 nenlvdaaeaRrelDwliGinlsrlltk...klkg...kkvlsaGRVqtptLaliveRereienFvpeeyweveatlkkekkekekkkkkkkerikd 93 
                    ++ +da+ aR elD+++G+ ++rl+t+   ++++   +kv+s+G++q ptL+++v+R +  e+Fvpe++w +++  +k+++++  ++++k++r+ d
    EPX73237.1 166 SKDAADAVSARIELDFRLGAIFTRLQTLqlqRAFEilqSKVISYGPCQFPTLGFVVDRWQRVEDFVPENFWFLKLV-DKRERQT-VNFTWKRNRVYD 260
                   67889***********************66522225659**********************************975.4444444.48********** PP

  Topoisom_bac  94 keeaeaileklkkk.eakvesvekkekkkppplpfdtttLqkeasrklglsakktlsiaqkLYekaglitYpRTdstrlseeaelkailealakkyg 189
                   + +a  +le++ +   akv++v++k  ++++plp++t++L k   ++l+ls+kktl++a++LY++ g+++YpRT+++++++  +l  i+ +l+    
    EPX73237.1 261 RLAAILFLENCLDAkVAKVVKVNQKPARRYKPLPLSTVELTKMGPKYLRLSSKKTLELAESLYTN-GFVSYPRTETDQFDSGMDLHGIIGKLTVS-- 354
                   ***********99559************************************************7.****************88*********85.. PP

  Topoisom_bac 190 keylefaekllkktkkks.vvknkkveaHeAIrPteelpklkelsddekklYelIvrrflaslmkdakyeettvkleveeeefkasgktilekGfkk 285
                   +++ +fa+ ll  +  +    ++ ++ aH++I+P++ ++++  +s+d++k+YelI+rrfla+++++a+  et v+l+ ++e+f+ +g +i+e++++ 
    EPX73237.1 355 EDWGPFAQGLLDGNF-RIpRKGKHNDRAHPPIHPINFVHRSALQSQDHWKVYELITRRFLACCSENAIGAETIVELQMGDESFSQKGLVIIERNYLD 450
                   78*******998443.43344444449********8888667778**************************************************** PP

  Topoisom_bac 286 vykeekkeeeeeelpelkegeevkvkeveleekkTkppkryteasLikamekagiGtpaTraeiieklvergYverk....k.kslvptelGkalve 377
                   vy+++k+  +  +lp++++gee+    +++++  T+ p+++te +Li++m+ +giGt+aT+a++iek++er+Yv ++      +++vp++lG+al++
    EPX73237.1 451 VYPYDKWTGT-GQLPAYQVGEEFVPSMLNITDSVTTSPSYLTEPELIALMDANGIGTDATMADHIEKVQEREYVIKRkkrgAaTEFVPSSLGIALAK 546
                   **99998876.49*************************************************************88744443357************ PP

  Topoisom_bac 378 llekf.kd..lvspelTaeleekLdeIaegkadakevl 412
                   +++++  +  l++p l++e+e +L++I++g +d+++++
    EPX73237.1 547 GYDEIgLEwsLTKPFLRKEMEVQLKNIETGHLDRDALV 584
                   **88875456**********************998765 PP

>> Toprim  Toprim domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.7   0.0   1.1e-23     1e-19       1     102 [.       3     149 ..       3     150 .. 0.89

  Alignments for each domain:
  == domain 1  score: 70.7 bits;  conditional E-value: 1.1e-23
                 EEEEESSHHHHHHHHHTHT............................STEEEEEEESSSSEEEHS.....TTEEEEE...........ECTTTHHHHHH CS
      Toprim   1 elvivEgpsdaktiakalg............................sgfqavtaslGhildlet.....efkpvye...........eiedkkkvlka 55 
                 +l+++E++s ak++a++lg                            s ++++t+++Gh+++  +     +++ v +           + ++++   + 
  EPX73237.1   3 VLCVAEKNSIAKSVASILGggqvkrrdtkskyiknydftfdfggyigSAQVTMTSVSGHLTEASFpseynSWSSVPQdilfdariitsVSKNANVLADN 101
                 69***************************************************************8888866666667778777556566666666666 PP

                 HHHHHHHHSEEEEECSSSHHHHHHHHHHHHHHTHHHTT.TEEEEEESS CS
      Toprim  56 lkelakradeiilatDpDreGeaiawellevlkellen.kigrvefse 102
                 +k++a++a +++++tD+DreGe+i++e+ +v++  +++ ++ r+ f++
  EPX73237.1 102 IKKEARNATYLYIWTDCDREGEHIGMEITNVARTSNPQiRVIRADFNN 149
                 *********************************888888999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (619 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       480  (0.0267723); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.25s 00:00:00.85 Elapsed: 00:00:00.45
# Mc/sec: 4153.91
//
Query:       EPX73238.1  [L=123]
Description: hypothetical protein SOCG_00993 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.041   13.9   0.4       0.11   12.5   0.1    1.8  2  Tsi6      Tsi6
       0.17   11.6   1.1       0.24   11.2   0.1    1.7  2  RTP1_C2   Required for nuclear transport of RNA pol II C-term
       0.19   11.4   2.1        1.3    8.8   0.4    2.1  3  DUF713    Protein of unknown function (DUF713)


Domain annotation for each model (and alignments):
>> Tsi6  Tsi6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   1.9e-05      0.11      29      74 ..      32      79 ..      20      88 .. 0.81
   2 ?   -0.6   0.1      0.23   1.4e+03      17      37 ..      97     115 ..      82     117 .. 0.55

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.9e-05
                HHHHHHHHHHHHH-TTS-SCGGGG--..HHHHHHHHHTTT-HHHHHHH CS
        Tsi6 29 ieqqLeylkdvlegeekdkskLhklt..lGalAskeFeetdpelaeaL 74
                i + L+y++++ ++ +k+ s+L+kl+  +G  +  + ++t  ++a+ L
  EPX73238.1 32 IYRSLRYIRKYENEYQKENSNLNKLAmgIGQCSPSDVAATKKQFAKSL 79
                6678*******************7761155677888888888888877 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.23
                 HHHSTT-HHHHHHHHHHHHHH CS
        Tsi6  17 ekalpgfplYasieqqLeylk 37 
                 ++++  ++ Y+ + ++++yl 
  EPX73238.1  97 YANV--YAAYERLNDKIRYLE 115
                 2222..456777777777775 PP

>> RTP1_C2  Required for nuclear transport of RNA pol II C-terminus 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1      0.62   3.7e+03      11      16 ..      21      26 ..      20      27 .. 0.83
   2 ?   11.2   0.1   3.9e-05      0.24       5      19 ..      32      46 ..      31      47 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.62
     RTP1_C2 11 yVedtD 16
                +Ve tD
  EPX73238.1 21 FVEFTD 26
                89**99 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 3.9e-05
     RTP1_C2  5 lyrtLkyVedtDtDd 19
                +yr+L+y++ +++ +
  EPX73238.1 32 IYRSLRYIRKYENEY 46
                9***********987 PP

>> DUF713  Protein of unknown function (DUF713)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.1     0.029   1.7e+02      48      88 ..      18      58 ..       4      62 .. 0.72
   2 ?    2.4   0.1     0.019   1.1e+02     131     164 ..      39      72 ..      21      73 .. 0.72
   3 ?    8.8   0.4   0.00021       1.3      68     103 ..      81     116 ..      64     118 .. 0.75

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.029
      DUF713 48 knrfsdfeeeikksdkeekklekedleelqselsnLakkvl 88
                 ++f +f +++  +  ++ ++ ++ ++e q+e snL+k  +
  EPX73238.1 18 ASEFVEFTDDVPIEIYRSLRYIRKYENEYQKENSNLNKLAM 58
                56677777776666655556666677788888888888766 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.019
      DUF713 131 ilevldeleldkekleelrelfskldpsdIptTs 164
                 i +  +e+++++++l++l   + + +psd+  T+
  EPX73238.1  39 IRKYENEYQKENSNLNKLAMGIGQCSPSDVAATK 72 
                 5555567777778888888888888888887776 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.00021
      DUF713  68 lekedleelqselsnLakkvlsaynkLeeafeklke 103
                  ++e +++ + e+++L   v+ ay++L+++   l++
  EPX73238.1  81 HSDEYMQQTNAEAQKLYANVYAAYERLNDKIRYLEN 116
                 244789999*******************99888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1278  (0.0712812); expected 358.6 (0.02)
Passed bias filter:                      602  (0.0335769); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 859.95
//
Query:       EPX73239.1  [L=250]
Description: 40S ribosomal protein S3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.5e-23   82.4   0.2    1.4e-22   80.0   0.4    2.0  2  Ribosomal_S3_C  Ribosomal protein S3, C-terminal domain
    3.2e-14   52.5   0.1    6.7e-14   51.5   0.1    1.6  1  KH_2            KH domain
  ------ inclusion threshold ------
       0.16   12.5   0.0       0.32   11.5   0.0    1.5  1  UN_NPL4         Nuclear pore localisation protein NPL4


Domain annotation for each model (and alignments):
>> Ribosomal_S3_C  Ribosomal protein S3, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.46   2.7e+03      18      34 ..      28      44 ..      15      45 .. 0.75
   2 !   80.0   0.4   2.3e-26   1.4e-22       2      83 .]     109     191 ..     108     191 .. 0.98

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.46
                    HHHHHHHCC-SEEEEEE CS
  Ribosomal_S3_C 18 airramkagakGikiqv 34
                    + r++ ++g  G++++v
      EPX73239.1 28 FTRELSEEGYSGCEVRV 44
                    45667778888998876 PP

  == domain 2  score: 80.0 bits;  conditional E-value: 2.3e-26
                     HHHHHTT--HHHHHHHHHHHHHHCC-SEEEEEEEC-SS.TTT--EEEEEEC----..TCHHHH-EEEEEEEEETTEEEEEEEEE CS
  Ribosomal_S3_C   2 aeqlekrvsfRramkkairramkagakGikiqvsGrLggaeiarsekykeGrvpl..htlradidyavaeaktkyGiiGvkVwI 83 
                     +++l +++++Rra++ ++r +m+agakG+++++sG+L+ a +a+s+k+++G +++  +++ + id a++++ +++G++GvkV+I
      EPX73239.1 109 RYKLLAGLAVRRAAYGVLRYVMEAGAKGCEVVISGKLR-AARAKSMKFADGFMIHsgQPAVDFIDAATRHVLLRQGVLGVKVKI 191
                     679999********************************.*******************************************98 PP

>> KH_2  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.5   0.1   1.1e-17   6.7e-14       1      76 [.      23      97 ..      23      99 .. 0.96

  Alignments for each domain:
  == domain 1  score: 51.5 bits;  conditional E-value: 1.1e-17
                HHHHHHHHHTECETEEEEEEECCSCEEEEEEEESCHHHHHTGGGHHHHHHHHHHHHHHHHHHTTCEEEEEEEETTT CS
        KH_2  1 eipeslaveikkagvskveIertanrviiviresqpgivIGkgGsnikkigkelrkdieklegkkVklnivkVkkp 76
                e++e++++e++++g+s++e++ t+ r +i++r+ + + v+G +G++i+++++ ++k++ k+ +  V+l+ +kV+++
  EPX73239.1 23 ELNEFFTRELSEEGYSGCEVRVTPARSEIIVRATHTQDVLGEKGRRIRELTALVQKRF-KFAENTVELYAEKVQNR 97
                6899****************99************************************.6*************985 PP

>> UN_NPL4  Nuclear pore localisation protein NPL4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   5.3e-05      0.32      22      56 ..      65      99 ..      50     112 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 5.3e-05
                TTSBHHHHHHHHHHHSS-STTT-EEESSTTCGCCC CS
     UN_NPL4 22 ekstlktllekvaeelkfsengfslylernkttel 56
                +   +++l  +v++++kf en  +ly e+ +++ l
  EPX73239.1 65 KGRRIRELTALVQKRFKFAENTVELYAEKVQNRGL 99
                5567899*********************9888766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       522  (0.0291148); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1778.10
//
Query:       EPX73240.1  [L=628]
Description: fork head transcription factor Fkh2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.1e-38  128.8   0.7    1.4e-37  127.9   0.7    1.5  1  Forkhead  Forkhead domain
    5.2e-08   33.1   0.0    9.8e-08   32.2   0.0    1.5  1  FHA       FHA domain
  ------ inclusion threshold ------
       0.21   10.4   0.1       0.36    9.7   0.1    1.2  1  Serinc    Serine incorporator (Serinc)


Domain annotation for each model (and alignments):
>> Forkhead  Forkhead domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.9   0.7   2.3e-41   1.4e-37       2      86 ..     224     308 ..     223     309 .. 0.95

  Alignments for each domain:
  == domain 1  score: 127.9 bits;  conditional E-value: 2.3e-41
                 -----HHHHHHHHHHT-TTT-B-HHHHHHHHHCC-HHHHCC.-CCHHHHHHHHHHHHC--EEETT.-T.TSS--EEE--TTHHHHH CS
    Forkhead   2 kPpysYaaLIaqAiksspekkltLseIyefieenfpyyrtaakkgWqnSirhnLslnkcFekvpreee.egkgslwtidpeseekf 86 
                 kPpysY+ +IaqAi+ssp+ ++tLs+Iy++i++++pyyrt+ k+gWqnSirhnLslnk+F+kvpr++  +gkg+ w+i+pe +e+f
  EPX73240.1 224 KPPYSYSVMIAQAILSSPDCMMTLSNIYNWISTHYPYYRTT-KSGWQNSIRHNLSLNKAFRKVPRKSGeQGKGMKWSIEPEFREEF 308
                 9***************************************5.**********************9776369**********99987 PP

>> FHA  FHA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.2   0.0   1.6e-11   9.8e-08       8      67 ..     116     175 ..      96     177 .. 0.75

  Alignments for each domain:
  == domain 1  score: 32.2 bits;  conditional E-value: 1.6e-11
                 TSSEETT.STTSTTTEEEEEEETTCEEEEEEEESSSSSEEETTEEESTTSEEEE-TTEEEE CS
         FHA   8 dcdivld.dpsiSrkHalikfdkgsgkvyleDlgSknGtfvNgqrigkgepveLksgdvie 67 
                 + d+ +  ++++SrkHa+++++ + +++  +  g +nG+ v+g+  ++ge v+L+sg+v++
  EPX73240.1 116 EVDMNFGpSKVVSRKHAVVEYNMQGQTWNCTIYG-RNGVKVDGKLYKPGEVVRLSSGSVLD 175
                 33333335799*************8888888866.***********************997 PP

>> Serinc  Serine incorporator (Serinc)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.1     6e-05      0.36     318     388 ..     187     257 ..     165     273 .. 0.62

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 6e-05
      Serinc 318 aeeegalpesal.eeeeeeeeekekeee.ekkvlddekegvsYsYsfFhfvfflaslYvmmllTnWispeeae 388
                 +++e++++e++  ee ee+e+++e++ + e++v+d+  ++  YsYs+     +l+s  +mm+l n ++  +++
  EPX73240.1 187 NASEQTITEEKVgEEMEEAEKSEESSVTiENNVYDN--RKPPYSYSVMIAQAILSSPDCMMTLSNIYNWISTH 257
                 344444444443233333333333322333355555..5678**********************977665333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (628 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       719  (0.0401026); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.25s 00:00:00.84 Elapsed: 00:00:00.42
# Mc/sec: 4437.19
//
Query:       EPX73241.1  [L=812]
Description: transcription factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-34  119.3   5.1    2.3e-34  118.7   5.1    1.3  1  Fungal_trans  Fungal specific transcription factor domain
    8.4e-13   48.2  11.7    1.4e-12   47.5  11.7    1.4  1  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.7   5.1   2.5e-38   2.3e-34       3     266 ..     211     454 ..     209     455 .. 0.92

  Alignments for each domain:
  == domain 1  score: 118.7 bits;  conditional E-value: 2.5e-38
  Fungal_trans   3 rffsnfhpqfpilhkpsflpkt.ssenssksayaspllllailalGalfsesetkesnssltsesqefiafplraeilihedfsspssslwilqsLl 98 
                    ff n h + ++ h p+f++    +  s+k++ ++++ll+a l+lG+++++s+t+ s ++ ++     +++++ra+  +  +f+  s++++++q L+
    EPX73241.1 211 NFFLNDHFLVHFHHIPTFYERLhIYYHSEKKDPNFHFLLAATLCLGYTYLSSTTNASVYPYHKA--YRYYYYIRAA--F--HFE-DSYDIEVIQVLV 300
                   58999888889999999999999899999****************************9999984..5666777764..3..345.5555******** PP

  Fungal_trans  99 llelyektssdralherhhgvavrlarslgLhrnpsyvgkkslwklweeeaesrrRlwwaaFylDktialklGrppllddsqinlpLPcddddlwes 195
                    ++l+ + ss+ ++++ ++++a+ ++++lgLhr+ s+v        ++e    r+R++++++++ ++++++ G p ++ d++i++ LP++ d     
    EPX73241.1 301 SVALFALFSSRLSQAYSFMNIALFCCHELGLHRDFSDVL------TSPE-TRLRKRVFYSVYVMSCYTSTIIGLPLTIEDDEIDQGLPNSYD--FVL 388
                   ***************************************......9999.9*************************99**********9999..778 PP

  Fungal_trans 196 ddaseetlvetklsneeksrkiasfllaLkkilskiagsllsiekqlqqrdlqseklswveeleraldnWr 266
                   d+++   +v     +e+ s +i++++++L++ils+++++++ i++  + +  +  +l  v+e+e++l+nW+
    EPX73241.1 389 DNEAIPANVV---ASECGSLEIFNQHISLSRILSHFVRKVYPIKSSNDANCRV--SLTAVREHENRLTNWW 454
                   8888888888...78**************************************..***************8 PP

>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.5  11.7   1.6e-16   1.4e-12       1      39 [.      14      50 ..      14      51 .. 0.93

  Alignments for each domain:
  == domain 1  score: 47.5 bits;  conditional E-value: 1.6e-16
                SS-HHHHHCT---STSSSS-HHHHHCTHHHCCCCTCCCE CS
     Zn_clus  1 haCdnCrkkKvKCdakkPaCsnCkklnleCtfysesskr 39
                +aCd+C+++K+KCd++kP CsnC+++n+eCt y ++ kr
  EPX73241.1 14 RACDECHRRKIKCDQQKP-CSNCRTYNYECT-YGQPFKR 50
                69****************.************.9888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (812 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       714  (0.0398237); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.30s 00:00:00.98 Elapsed: 00:00:00.46
# Mc/sec: 5277.09
//
Query:       EPX73242.1  [L=428]
Description: C-14 sterol reductase Erg24 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   5.4e-142  473.5  16.3   6.7e-142  473.2  16.3    1.1  1  ERG4_ERG24  Ergosterol biosynthesis ERG4/ERG24 family
     0.0011   18.5   3.0     0.0011   18.5   3.0    2.8  3  DUF1295     Protein of unknown function (DUF1295)


Domain annotation for each model (and alignments):
>> ERG4_ERG24  Ergosterol biosynthesis ERG4/ERG24 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  473.2  16.3  7.5e-146  6.7e-142      58     432 .]      57     428 .]      13     428 .] 0.93

  Alignments for each domain:
  == domain 1  score: 473.2 bits;  conditional E-value: 7.5e-146
  ERG4_ERG24  58 llvfegaiwerklftvfllfyvlqavlylllpGkvveGleLs.ngkkLkYkinalaslllvlaillvlqvtelfe.ltvlidnfvqlisvailfafala 154
                  ++ ++++ +++ f ++l +    ++   +lpG++v+Gl+++ +g++L+Yk+n++a+  lvl i+    + + +e ++++  +f +l+++a +++++l+
  EPX73242.1  57 SMIQNTTFIDAYSFQLYLCWLGALILAWHVLPGEWVKGLPINeKGTRLEYKMNGFATSSLVLGITCGFIYIKGPEcMELVWSRFLPLMTSAYVVSIFLS 155
                 33444456779******************************999*************8888888888888877773567889***************** PP

  ERG4_ERG24 155 ivlYvrslkvkerkkdkqlaaggvsGnliYDffiGreLnPRlgslDlkmFlelRlgllllllinlaallkqyk.lygkvtdslllvllaqllYvfdgvk 252
                 +++Y+ s++ k+     qla gg+sGn++YD+fiGr LnPR+g++D+k+F+elR+gl+l++++++a++ +qy  l g++tds++lvl+ ++ Yv d++ 
  EPX73242.1 156 VYVYISSFIGKK-----QLAEGGNSGNVLYDWFIGRILNPRIGKFDIKVFCELRPGLILWIFLDIALACRQYVmLNGRITDSMVLVLIFHVWYVLDSLV 249
                 ********9887.....9*****************************************************972579********************** PP

  ERG4_ERG24 253 neeavlttmDittdgFGFmLaFgdlvlvPftYslqtlYLsvhPselgwstvlvailvvlligyyiFrsansqknnFRtnPedpklkllkyiqtktGskL 351
                  e avltt+D+ttdgFG+mL+Fgdlv+vPftYslq++YLs  P++lg   +++ai ++ l+gyyiFr +nsqkn FR  P++p++k+lk+iqtk+Gs+L
  EPX73242.1 250 CESAVLTTIDVTTDGFGYMLSFGDLVWVPFTYSLQARYLSFRPVDLGIG-YTTAIILIQLLGYYIFRGSNSQKNRFRNDPTHPSVKNLKFIQTKRGSRL 347
                 ***********************************************98.9************************************************ PP

  ERG4_ERG24 352 lvsGWyglarkinYlgDwlqslswsLatgfqsvlpyfyvlyFlvlLvhRelRDeekCkkkYGedweeYkkkvpykiipyvy 432
                 l++GW+g++r++nY+gDwl++++w+L++gf s +pyfyv yF vlL+hR  RD++kC++kYG+dw +Y+++v+y+iipyvy
  EPX73242.1 348 LIDGWWGKSRHMNYFGDWLMAWAWCLPVGFGSAIPYFYVAYFGVLLIHRYGRDDHKCNEKYGDDWKKYCQIVKYRIIPYVY 428
                 ********************************************************************************9 PP

>> DUF1295  Protein of unknown function (DUF1295)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.5     0.094   8.4e+02     173     190 ..      73      90 ..      68      97 .. 0.81
   2 ?   -2.4   0.9       0.3   2.7e+03      17      50 ..     209     242 ..     208     248 .. 0.85
   3 !   18.5   3.0   1.2e-07    0.0011     128     181 ..     307     373 ..     273     397 .. 0.70

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.094
     DUF1295 173 aliWwglflialealegl 190
                  l+W+g +++a+++l g 
  EPX73242.1  73 YLCWLGALILAWHVLPGE 90 
                 689*********998763 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.3
     DUF1295  17 lwgvlfvilavltlllseaaklrrllvllLvvlW 50 
                 lw +l ++la+  +++ ++  + +++++l+  +W
  EPX73242.1 209 LWIFLDIALACRQYVMLNGRITDSMVLVLIFHVW 242
                 6888888899999999999999999999999999 PP

  == domain 3  score: 18.5 bits;  conditional E-value: 1.2e-07
     DUF1295 128 wlvgivlealaDqQlsaf............kkdpankgk.vldsGLwrysRHPNYfgealiWwglfl 181
                  l+g  +   +  Q+++f            k   + +g  +l +G w  sRH NYfg++l+ w+ +l
  EPX73242.1 307 QLLGYYIFRGSNSQKNRFrndpthpsvknlKFIQTKRGSrLLIDGWWGKSRHMNYFGDWLMAWAWCL 373
                 3444455556788888886666666665554445567776999*****************9888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (428 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       606  (0.0338); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.32s 00:00:00.96 Elapsed: 00:00:00.54
# Mc/sec: 2407.69
//
Query:       EPX73243.1  [L=442]
Description: ribosomal RNA processing element (RRPE)-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.5e-19   67.6   0.0    1.7e-18   66.4   0.0    1.5  1  Stb3      Putative Sin3 binding protein


Domain annotation for each model (and alignments):
>> Stb3  Putative Sin3 binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.4   0.0   9.4e-23   1.7e-18       4      79 ..     132     203 ..     129     212 .. 0.92

  Alignments for each domain:
  == domain 1  score: 66.4 bits;  conditional E-value: 9.4e-23
        Stb3   4 eklakahlpeillekGPlaiRhitaalttsvpgFsklspskaRRlvvaalegradkendvvfekvGWGrWdakkvg 79 
                 + l++++lp il ++G l+iR +++ l ++ p F+ lsp+++RR + +ale++    + ++f+kvGWGrW  +   
  EPX73243.1 132 DTLSTQYLPTILSTHGSLPIRQLMSVLIETYPMFNVLSPTQQRRALTKALESQ----KGIMFDKVGWGRWILRDST 203
                 5799***********************************************99....89***********988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (442 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       609  (0.0339673); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.30s 00:00:00.89 Elapsed: 00:00:00.50
# Mc/sec: 2652.40
//
Query:       EPX73244.1  [L=619]
Description: APC amino acid transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   6.8e-103  344.8  40.1   8.6e-103  344.5  40.1    1.0  1  AA_permease    Amino acid permease
    6.6e-34  117.5  40.9    8.1e-34  117.2  40.9    1.1  1  AA_permease_2  Amino acid permease


Domain annotation for each model (and alignments):
>> AA_permease  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  344.5  40.1  9.6e-107  8.6e-103       1     469 [.      95     541 ..      95     547 .. 0.97

  Alignments for each domain:
  == domain 1  score: 344.5 bits;  conditional E-value: 9.6e-107
  AA_permease   1 hvlvialggviGtglfvglgvvlsqaGplgallayllagvviflvmlslgeiatngpksggfytyasrflgpelGfviGlnylfswitvlaleltaas 98 
                  h+++ia+g  iGtgl+v+ g+ l +aGp+++l+ +++ + +i+  ++slge+ + +p+  ++++y  rf+++ +Gf+++++y   w+t+l+ e+ aa 
   EPX73244.1  95 HLQMIAIGVCIGTGLYVAVGKSLKNAGPGSLLINFIVLTSMILPLIISLGELCCVFPSQPSITMYPGRFVSENVGFACSWLYYAIWLTTLPSEVSAAT 192
                  99************************************************************************************************ PP

  AA_permease  99 iliqfwelvtdlpkawvtgavflvvlliinlvgvkvygeaefilalikiiaiiafiivgiillaggkpnkga..gfrflgdngsifknnlppgfakee 194
                   +++fw   ++l+ + v+++vfl++++++n +g+++yge+ef+ +++k+++i++f+ v+ii+++g++pn g   g+rf++++g+     + +g     
   EPX73244.1 193 EIVGFW-KSQHLN-TAVWVTVFLAYVVLVNAMGARGYGETEFFSSFLKVLSIVIFFFVSIIINCGAAPNGGGyvGARFWHHPGA-----FRNG----- 278
                  ******.667777.********************************************************999***********.....****..... PP

  AA_permease 195 egafknfisvfvivvfaftGielvaiiagEvkdPeksiPkailqvviritifYvlsllligllvprndlgllndsasaaspfvifikesgvsvlapli 292
                     fk+f+svf+ ++ +++G+e+++++ag ++ P+++iP a+++v++r+++fY+  ++li+l+vp+nd+gl+       spf+++i++ g++vl++++
   EPX73244.1 279 ---FKGFCSVFISSAYSLAGTENIGTAAGNTAHPQQAIPSAVKKVFYRVFFFYIVTIFLITLVVPYNDPGLTD-----TSPFILAIQNGGIRVLPDIF 368
                  ...**********************************************************************.....89****************** PP

  AA_permease 293 naviltaalssansslysasRvlyslakdglaPkvlkkvskrgvPlraillsmiisllalllaslnlaapivfnfllaisaliglivwlliilsylrf 390
                  na+il+++ls++ns++++asR   +l ++g aP++l++v+++g+P+ ++l+s++++++++ +a+ + +  +vf++++++s+   + +w+l+ ls++r+
   EPX73244.1 369 NAIILVSILSVGNSAVFAASRSGIALVRQGWAPRFLARVDQKGRPVISYLISLLFACISYANAAPKGG--VVFDWVSSVSGGGSFCIWGLTFLSHIRL 464
                  ************************************************************55555555..**************************** PP

  AA_permease 391 Rkalkyqgrsieelgfkaallplgvilvlaaliiillilalyayltvkkgpkdwgaasfaaaylivllfliilvgvklh 469
                  R a+k+q++    l+++  + +++++++l+++ + l +l ++ +++v   p   +a +f+ ++l+   f+++lv+  + 
   EPX73244.1 465 RLAMKAQNIPDTILPYRFSGSFYMSCYGLLINFLALCTLVYISIFPVSHNP--PNAYDFFVSFLGPSFFIVVLVISPFV 541
                  ******************************************999977766..68*****************9987665 PP

>> AA_permease_2  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.2  40.9     9e-38   8.1e-34       6     421 ..      96     527 ..      91     537 .. 0.82

  Alignments for each domain:
  == domain 1  score: 117.2 bits;  conditional E-value: 9e-38
  AA_permease_2   6 afalvigsvigsgifvkn..laasggpalilwvwiavligslavllvyaElssalprsgGiyvytkaafgkkvaflsawfnwfayvpvlasilsva 99 
                    + +++ig++ig+g +v+   ++ ++gp ++l+ +i+   ++l++++ + El++++p+   i  y  ++ ++ v+f ++w++   ++ +l+s +s a
     EPX73244.1  96 LQMIAIGVCIGTGLYVAVgkSLKNAGPGSLLINFIVLTSMILPLIISLGELCCVFPSQPSITMYPGRFVSENVGFACSWLYYAIWLTTLPSEVS-A 190
                    6689***********998887777888888888888888889****************************************999999987665.5 PP

  AA_permease_2 100 asyllnalgpdlqgntwltyliaiaililvalinirgikesakiqnilgilkillpliiliilglitvdgggfssl......stetdt..ffpngw 187
                    a  ++++++++  +    t + + ++l++v+l+n++g ++++   ++   lk+l  ++i++ + +i+ +g   +           ++    f ng 
     EPX73244.1 191 ATEIVGFWKSQ--H--LNTAVWVTVFLAYVVLVNAMGARGYGETEFFSSFLKVL-SIVIFFFVSIIINCGAAPNGGgyvgarF--WHHpgAFRNGF 279
                    56666667532..2..3355557889***************************6.5566666777776665555446666443..33334899999 PP

  AA_permease_2 188 pgvllgllivlwsfdGfesaanvsee..vkkkdvpkaifigllivlvlyllvniaflgvvpddeianlsnlgsvaalffeavggkvvaiivvilia 281
                    +g+ +++  +++s++G e++   +    +++  +p a   ++  v+++y+++ ++++ vvp +    ++++  ++ l  ++ g +v+  i++++i 
     EPX73244.1 280 KGFCSVFISSAYSLAGTENIGTAAGNtaHPQQAIPSAVKKVFYRVFFFYIVTIFLITLVVPYNDPGLTDTS--PFILAIQNGGIRVLPDIFNAIIL 373
                    99************************878889*********************************999986..599*****8889*********** PP

  AA_permease_2 282 lsllgaintavigssrvlealardgvlPrffakvnkfgspiraiiltaivslillllfllas..saaynfllsvsslgliisyllliigalilrkk 375
                    +s+l  +n+av+++sr   al+r+g+ Prf+a+v+++g+p+ +  +++++++i +     a+  +  +++++svs  g++++++l++++ + lr  
     EPX73244.1 374 VSILSVGNSAVFAASRSGIALVRQGWAPRFLARVDQKGRPVISYLISLLFACISYANA--APkgGVVFDWVSSVSGGGSFCIWGLTFLSHIRLRLA 467
                    ***************************************************9998544..556699****************************99 PP

  AA_permease_2 376 rphl..kr..........pgk....ilvaiigalfllfllvalffp.pkgpatqssliytiil 421
                    ++ +  +           +++     l++++++++l+++    +fp + +p +   ++++ ++
     EPX73244.1 468 MKAQniPDtilpyrfsgsFYMscygLLINFLALCTLVYI---SIFPvSHNPPNAYDFFVSFLG 527
                    887644336775555555444443345555554444444...444435677777777777444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (619 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       651  (0.0363099); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.30s 00:00:00.88 Elapsed: 00:00:00.46
# Mc/sec: 4010.22
//
Query:       EPX73245.1  [L=269]
Description: histone acetyltransferase complex subunit Eaf7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      7e-15   55.3   0.0      7e-15   55.3   0.0    2.3  2  Eaf7      Chromatin modification-related protein EAF7
  ------ inclusion threshold ------
       0.13    9.3  10.1       0.15    9.2  10.1    1.0  1  GREB1     Gene regulated by oestrogen in breast cancer


Domain annotation for each model (and alignments):
>> Eaf7  Chromatin modification-related protein EAF7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.3   0.0   7.8e-19     7e-15       1     103 [.      33     126 ..      33     128 .. 0.86
   2 ?   -3.1   2.7       1.1     1e+04      37      37 ..     215     215 ..     160     254 .. 0.63

  Alignments for each domain:
  == domain 1  score: 55.3 bits;  conditional E-value: 7.8e-19
        Eaf7   1 deirLfklii.efkPaGihKhFrmlaiverlnkpdkytllqkekpksgkhtsiediwekLktlYdLkaldelenekeeeeeeeekekee.kakeleekk 97 
                 +e+ L+k+i+  ++P+G +KhF+m+++++ +++             ++ + +++d+w+k++tlY+L+++++le   + ++ e++k++ +    + + ++
  EPX73245.1  33 EETLLLKAICqGLRPVGTEKHFHMIGMLRMIHE-----------GCQTSTKRVQDVWDKVGTLYNLQEFERLEAVPSPSAGEKRKRDAKiDDAKEDFQN 120
                 5899******669***************99999...........67788999***********************877776666655544667778899 PP

        Eaf7  98 dFeLPe 103
                 dFe P+
  EPX73245.1 121 DFEIPK 126
                 999995 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 1.1
        Eaf7  37 t 37 
                 t
  EPX73245.1 215 T 215
                 1 PP

>> GREB1  Gene regulated by oestrogen in breast cancer
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2  10.1   1.6e-05      0.15    1054    1254 ..      60     261 ..      35     269 .] 0.58

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 1.6e-05
       GREB1 1054 lrlidssyltrtaleqel..glaaylvskevvreksvgsdllesdaeklsstdnedeelqedgerpksnssavqstsdsvaadaaeessktspvkve 1148
                  lr+i+ ++ t t+  q++   +++ +  +e  r ++v s    +  +++++ d  +e+ q+d e pk   ++ ++ + s ++  + + ++t ++k +
  EPX73245.1   60 LRMIHEGCQTSTKRVQDVwdKVGTLYNLQEFERLEAVPSPSAGEKRKRDAKIDDAKEDFQNDFEIPKFILNSTKNPPASSTSTPKASGANTGEKKLT 156 
                  89999999999999999955578888889999999999999999999******************98887777776666666666666666666666 PP

       GREB1 1149 kseskdavesglsskasakselseasaaaasaseeaksp.kasvtseeeeseeskekekeslsketesqlsleaseqkealdakassksssssssss 1244
                  +s++  +++   + ++++++ ++e++ + +  + + ++p ++++ s++++ ++  +++ +s + +++ ++ +e++++  ++++++ss++++ +s + 
  EPX73245.1  157 RSSMAASTAP-DKQESKQEPVVEEPNVKDEKDEATLEEPpSKQLRSSTSKPTTPLKNHDTSST-KEKPKT-QEKTDTMGKTPSEKSSTNTRAASQKQ 250 
                  6555554443.3444444455454333333333333232022333332222222222222222.111111.22222222333334444444443333 PP

       GREB1 1245 s.assPssscs 1254
                  s  ++Ps+ ++
  EPX73245.1  251 SeITNPSPPIR 261 
                  20333544443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (269 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1279  (0.0713369); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.33s 00:00:00.93 Elapsed: 00:00:00.48
# Mc/sec: 1699.26
//
Query:       EPX73246.1  [L=512]
Description: membrane bound O-acyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.4e-68  230.2   6.3    4.4e-68  230.2   6.3    2.2  2  MBOAT     MBOAT, membrane-bound O-acyltransferase family


Domain annotation for each model (and alignments):
>> MBOAT  MBOAT, membrane-bound O-acyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   2.7       0.1   1.8e+03     137     194 ..      50     107 ..      27     115 .. 0.76
   2 !  230.2   6.3   2.4e-72   4.4e-68      16     347 ..     122     425 ..     120     426 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.1
       MBOAT 137 alyalflgltylilieyvlskicakdftifkmlssaqllmrsvimrilllllllflli 194
                   +++ +gl+yli i+ ++  +++  f+    + +a l++ s++ +i+++++l+ +++
  EPX73246.1  50 NAFCILIGLFYLIPIHHLTTGTYVLLFDALFTYLTAALVRTSYMPWIVFVVILGHTFY 107
                 4455668899999999998888888888766666788888999999998888888775 PP

  == domain 2  score: 230.2 bits;  conditional E-value: 2.4e-72
       MBOAT  16 ltlalsvltlqlialvlslydgleketeltedvkellklllisyfvvgflelklhslslvfrklasaallsklpslleylgYvffyplllvGPilsyse 114
                 +t+  +vl+++l+a+++s+ydg + e+ l+ ++k+ +                                l klp+l+++lgYvff+p++lvGP ++y +
  EPX73246.1 122 ITASQMVLCMKLTAFAWSVYDGRQAENTLSDYQKQRR--------------------------------LKKLPNLFFFLGYVFFFPSVLVGPAFDYVD 188
                 6899*********************************................................99**************************** PP

       MBOAT 115 ymsfvesplsrllyta......krnfavalyalflgltylilieyvlskicakdftifkmlssaqllmrsvimrilllllllfllifdflglwlvalge 207
                 y  f+  +++++  ++      ++++++al++++ g ++l+ + +++s ++  ++   +++s + l +++ + ++++ ++++f++ +       +++g+
  EPX73246.1 189 YEHFITLSMFDTPRDPmetqitPHSLKPALGRCWRGVVWLLGFLFGSSLFPLSFLLSSDFASFSLLRKYAHVVLTVFIARMKFYGAW------ELSDGA 281
                 ************88889********************************************98888888888888888889999855......89**** PP

       MBOAT 208 dilsGlgvng......arldrvadrniygdwenavsfsefwraWNipvhkWLlryvYkplgskkfklnkslatlatFlfsAvwHglalgyliwfvlrvl 300
                 +ilsG+g+ng      +r+drv++++  g +e a+++++ ++aWN++++kWL++yvY ++ +kk+k++++ +tl+tF++sA+wHg+++gy+++fv +++
  EPX73246.1 282 CILSGIGYNGvdelkrPRWDRVKNIDPFG-FEFAYNIKGALEAWNMNTNKWLRNYVYLRV-AKKGKRPGFKSTLSTFTVSALWHGVSPGYYMTFVSAAF 378
                 *****************************.******************************.69************************************ PP

       MBOAT 301 lllveklimrlvalsnlkfdrrrailsnvifwlgaflgpslalllyl 347
                 +++  k+ +r++++++l+ d++++ +++ i++++ +++++l +++++
  EPX73246.1 379 IQTIAKYHRRFIRPFFLQPDMKTPGPFKSIYDIVGIVATNLSVSYLI 425
                 ********************************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (512 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       807  (0.0450109); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.30s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 3453.18
//
Query:       EPX73247.1  [L=864]
Description: sister chromatid cohesion protein/DNA polymerase eta Eso1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      8e-39  133.0   0.0    2.5e-38  131.4   0.0    1.9  2  IMS              impB/mucB/samB family
    2.1e-23   82.1   0.0    4.6e-23   81.0   0.0    1.5  1  Acetyltransf_13  ESCO1/2 acetyl-transferase
    4.3e-13   48.8   0.6    4.3e-13   48.8   0.6    3.2  3  zf-C2H2_3        zinc-finger of acetyl-transferase ESCO
    2.6e-12   46.1   1.5    1.4e-11   43.7   0.1    2.4  2  zf_UBZ           Ubiquitin-Binding Zinc Finger
     0.0017   18.8   0.0     0.0036   17.7   0.0    1.5  1  Acetyltransf_7   Acetyltransferase (GNAT) domain
     0.0097   16.1   0.0      0.022   15.0   0.0    1.5  1  Acetyltransf_1   Acetyltransferase (GNAT) family
  ------ inclusion threshold ------
      0.017   15.4   0.1      0.039   14.3   0.1    1.7  1  IMS_HHH          IMS family HHH motif


Domain annotation for each model (and alignments):
>> IMS  impB/mucB/samB family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.4   0.0   9.9e-42   2.5e-38       1     149 [.      32     252 ..      32     253 .. 0.97
   2 ?   -2.4   0.0       1.6   4.1e+03      76     108 ..     287     319 ..     285     343 .. 0.80

  Alignments for each domain:
  == domain 1  score: 131.4 bits;  conditional E-value: 9.9e-42
                 EEETTHHHHHHHHHT.T-.TTS-EEEEET....TEEEEE-HHHHTTT--TTSBHHHHHTTHTT-EEE.......................EEE-HHHHH CS
         IMS   1 iDmdaFyasverardpeL.kgkPvvvaqgsekrgiviavsyeArayGvkrgmrikeakklcpdlivv.......................kvdlekyrr 75 
                 iD daFya+ve +r  +   ++P++v+q+    + +iav+y+Ar + v+r+ +i eakk+cp+l+v+                       k+ l++yr+
  EPX73247.1  32 IDQDAFYAQVEIVRL-GVnPSTPFAVQQW----QGLIAVNYPARDANVSRHETITEAKKKCPELQVAhvktwkagdteakyhenpdpsnfKACLDPYRH 125
                 89************9.8989*********....9*****************************999999****************************** PP

                 HHHHHHHHHHHH-S..EEEEETTEEEEE-HH.HHHHHH-S.....................................................HHHHHH CS
         IMS  76 askkileilkrfispkvekasiDEayldltg.leelaese.....................................................gaalak 120
                 +s kil+i+k++ +p v+kasiDE++++ltg +++l  +e                                                     +a+++k
  EPX73247.1 126 ESVKILNIIKKH-APIVKKASIDECFIELTGeVKKLVLEEypflktppgdldtslpaapvllwkhengllidkeggntgeeyeqdwddiflhyAAKVVK 223
                 ************.77****************777777777*********************************************************** PP

                 HHHHHHHHHH---EEEEEESSHHHHHHHH CS
         IMS 121 elrkaikeelgltvsiGiasnkllAKlas 149
                 ++r++i++ l++t+s+Gi+ n++lAKl+s
  EPX73247.1 224 AIREDIFQSLHYTCSAGISFNPMLAKLVS 252
                 ***************************98 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.6
                 HHHHHHHHHHHH-S..EEEEETTEEEEE-HHHH CS
         IMS  76 askkileilkrfispkvekasiDEayldltgle 108
                 +++++++il + ++  v ++++D ++ +l++++
  EPX73247.1 287 FGEEVVRILGTDSISDVWSMQLDNVMRQLGQVN 319
                 6789999999999999*******9998888754 PP

>> Acetyltransf_13  ESCO1/2 acetyl-transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.0   0.0   1.8e-26   4.6e-23       4      63 ..     790     849 ..     788     853 .. 0.96

  Alignments for each domain:
  == domain 1  score: 81.0 bits;  conditional E-value: 1.8e-26
  Acetyltransf_13   4 lcGisriWvssshRrkgiAtkLldaarenfiyglelekeevAFsqPTesGkklarkyfgt 63 
                      l+G+sriWv +s R++giA++Ll++a ++fiyg++++++e+AF+qP+esGk+++ ++  t
       EPX73247.1 790 LLGVSRIWVTPSRRKQGIARALLECATSHFIYGYKISNKEIAFTQPSESGKRFILSWSRT 849
                      79*******************************************************876 PP

>> zf-C2H2_3  zinc-finger of acetyl-transferase ESCO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.2      0.34   8.6e+02      12      20 ..     524     532 ..     519     533 .. 0.75
   2 !   48.8   0.6   1.7e-16   4.3e-13       1      39 [.     637     672 ..     637     673 .. 0.93
   3 ?   -1.6   0.1      0.99   2.5e+03      23      32 ..     762     771 ..     761     772 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.34
   zf-C2H2_3  12 gasqCkeCg 20 
                 ++ +C eCg
  EPX73247.1 524 QSYTCDECG 532
                 3377****8 PP

  == domain 2  score: 48.8 bits;  conditional E-value: 1.7e-16
   zf-C2H2_3   1 QlvLdlgqksfgasqCkeCgMvYnpgspeDeklHkkfHa 39 
                 Q++Ldlg ++   ++C+eC M+Yn+ s+eD+ lH++fH+
  EPX73247.1 637 QMHLDLGSTT---VTCSECLMEYNKASEEDVDLHSRFHS 672
                 9******654...89***********************8 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 0.99
   zf-C2H2_3  23 YnpgspeDek 32 
                 Y+ +++eDek
  EPX73247.1 762 YVISEKEDEK 771
                 99*******9 PP

>> zf_UBZ  Ubiquitin-Binding Zinc Finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.7   0.1   5.6e-15   1.4e-11       2      31 ..     525     554 ..     524     555 .. 0.95
   2 ?    0.9   0.1      0.14   3.5e+02       2       8 ..     646     652 ..     645     662 .. 0.82

  Alignments for each domain:
  == domain 1  score: 43.7 bits;  conditional E-value: 5.6e-15
      zf_UBZ   2 tylCerCgkeipeselqEHeDwHfAkdLqe 31 
                 +y+C++Cg+ ip s + EH+D+HfA +L++
  EPX73247.1 525 SYTCDECGHIIPFSNKGEHDDYHFAINLSR 554
                 8***************************98 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.14
      zf_UBZ   2 tylCerC 8  
                 t++C++C
  EPX73247.1 646 TVTCSEC 652
                 89***** PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   1.4e-06    0.0036       8      49 ..     780     819 ..     759     852 .. 0.69

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 1.4e-06
                     EEETTEEEEEEEEEEESTCTEEEEE-GGGTTSSHHHHHHHH....T CS
  Acetyltransf_7   8 aeddgkivGfialslldaeitrlaVdpeyrgkGiGraLlea....a 49 
                     +++++ + Gf+          r++V p+ r++Gi+raLle+     
      EPX73247.1 780 IKENKLQAGFLL------GVSRIWVTPSRRKQGIARALLECatshF 819
                     344444445544......3446******************623320 PP

>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   8.5e-06     0.022      50      86 ..     779     816 ..     715     838 .. 0.70

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 8.5e-06
                     EEEEET.TSTTEEEEEEEEESGGGTTSSHHHHHHHHHH CS
  Acetyltransf_1  50 llkipd.ekggvayieslaVspeyrgkGlGsaLleale 86 
                     + k +  ++g    + +++V p++r++G+++aLle + 
      EPX73247.1 779 YIKENKlQAGFLLGVSRIWVTPSRRKQGIARALLECAT 816
                     3333335556666677******************9765 PP

>> IMS_HHH  IMS family HHH motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.1   1.5e-05     0.039       4      31 ..     268     296 ..     265     297 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.5e-05
     IMS_HHH   4 vkefLwplpitkipGiGgklgek.LeklG 31 
                 +ke+L++l+it+i+ +Ggk ge+  + lG
  EPX73247.1 268 IKEYLGSLSITDIRMLGGKFGEEvVRILG 296
                 89*******************99666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (864 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       549  (0.0306208); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.69u 0.29s 00:00:00.98 Elapsed: 00:00:00.47
# Mc/sec: 5517.54
//
Query:       EPX73248.1  [L=428]
Description: triglyceride lipase-cholesterol esterase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.1e-23   82.0   0.1    4.3e-22   79.0   0.1    1.9  1  Abhydrolase_1   alpha/beta hydrolase fold
    3.3e-20   71.4   0.1    7.1e-20   70.3   0.1    1.6  1  Abhydro_lipase  Partial alpha/beta-hydrolase lipase region
    8.4e-06   25.2   0.0      0.014   14.7   0.0    2.3  2  Hydrolase_4     Serine aminopeptidase, S33
     0.0011   18.6   0.0        1.2    8.8   0.0    2.2  2  FSH1            Serine hydrolase (FSH1)
     0.0033   17.0   0.0       0.05   13.1   0.0    2.1  2  DLH             Dienelactone hydrolase family


Domain annotation for each model (and alignments):
>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.0   0.1   1.2e-25   4.3e-22       1     255 [.     116     410 ..     116     412 .. 0.88

  Alignments for each domain:
  == domain 1  score: 79.0 bits;  conditional E-value: 1.2e-25
                    SEEEEE-STTTCGGGGTTGHHHHHHHHT........TSEEEEEEETTSTTSSSTTTGB...........CHHSHHHHHHHHHHHHHHCTTSSEEEE CS
  Abhydrolase_1   1 pvlvilhGlpgssdvwaerglapaLakd........gfdvillDlrGvgySspapacin..........ddygtasvaddldrildalgddkltlv 78 
                    +v+ ++hGl  +sd+w +   ++  +++        g+dv+l + rG+ yS+++    +          dd+ ++++ + +d+il  +g +kl ++
     EPX73248.1 116 GVVYCHHGLMTNSDLWVA---VNEPERNlpfvlvdnGYDVWLGNNRGNKYSRKHVVYKPkdeefwnfslDDMAMFDIPNTVDYILHETGEKKLSYI 208
                    589************888...445555567778888********************999************************************* PP

                    EETHHHHHHHHHHHHH...GGGEEEEEEESE.CSSCCHHHHHHHHHHHHHHCHHCHHHHHHHHHHHHHHHHC......CSCHHHHHHHHHHHHHHH CS
  Abhydrolase_1  79 GhSmGGmialayaaey...perVkalvllga.idpaaslieaqrqqaksfpdffdgyaadcarnpagpllad......elaaleqrhrlvdalkfp 164
                    G+S+G+++a+a ++++   +++V+ +++l++  +p+   +++ ++ +k  p+ + + +      p+ +++++       ++ ++++++l++     
     EPX73248.1 209 GFSQGTAQAFASLSLNnslNNKVNIFIALAPaFTPKGFSNHLVDYLVKANPKIMYNLFGRRSLLPSVTFWQNicyppiFVKIVDFSLKLLFDW--D 302
                    **********************************************************************99333333455566666666555..9 PP

                    CHHHCCHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHC...................THHHHSEEEEEEETTCSSSCHHHHHHHHHC.HTSE CS
  Abhydrolase_1 165 dkskrfpssgsdnasslatgalksieqwpttdsaklllrlre...................lknvlaptlvisgtsDplvppkaledlaql.lpkk 240
                    +k+ ++ ++   +a+  ++ ++ks+ +w +  ++  ++ ++                     +n+++p+l+i+g +D l+     e+++ +  p++
     EPX73248.1 303 LKNISASQKLCGYAHLYSFSSVKSCVHWLQIIKNCTFQLYDDdlavitgytarhyqvplfpTSNIKCPILLIWGGKDTLINM---EYMRTAlPPQA 395
                    999999998888999999999999888888777777777777788***********************************65...3333332799* PP

                    EEEEEETCSSSHHHH CS
  Abhydrolase_1 241 rlvvisdagHlafle 255
                    +++ i +++Hl+fl+
     EPX73248.1 396 KEIEIKHYEHLDFLW 410
                    *************98 PP

>> Abhydro_lipase  Partial alpha/beta-hydrolase lipase region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.3   0.1     2e-23   7.1e-20       2      62 ..      76     133 ..      75     135 .. 0.95

  Alignments for each domain:
  == domain 1  score: 70.3 bits;  conditional E-value: 2e-23
  Abhydro_lipase   2 seiirkhGypveeheVqTeDGYiLtlhRipaknksvssklekkpvVlLqHGLlasSevwvl 62 
                      ei++ +Gy++eeh ++TeD++iL lhRi ++    +++++k+ vV+++HGL+ +S+ wv+
      EPX73248.1  76 YEICEAFGYKAEEHLLRTEDNFILCLHRITHPS---KKETKKRGVVYCHHGLMTNSDLWVA 133
                     69*******************************...599********************96 PP

>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   3.8e-06     0.014      26     115 ..     144     245 ..     112     280 .. 0.70
   2 !    8.3   0.0   0.00034       1.2     187     229 ..     364     405 ..     350     407 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 3.8e-06
  Hydrolase_4  26 aLaaqGfavyalDhrGhGrse.........gkrghvpsfddyvdDlaaf.....vekvkeehpelplfllGhSmGGliallyllrypd...kvaglil 106
                   L+++G++v+  ++rG   s                + ++  +dD+a f     v+ +  e +e++l  +G S G + a++ l  + +   kv+ +i 
   EPX73248.1 144 VLVDNGYDVWLGNNRGNKYSRkhvvykpkdE-----EFWNFSLDDMAMFdipntVDYILHETGEKKLSYIGFSQGTAQAFASLSLNNSlnnKVNIFIA 236
                  699*****************97777544433.....3344455555555322227***************************95555556699***** PP

  Hydrolase_4 107 saPalkika 115
                   aPa+ +k 
   EPX73248.1 237 LAPAFTPKG 245
                  *****9873 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00034
  Hydrolase_4 187 aakitlPllllhGeaDkvvdpeasrelyerlgskdktlklypg 229
                  +++i+ P+ll+ G++D+++++e  r ++  +++ + ++k y++
   EPX73248.1 364 TSNIKCPILLIWGGKDTLINMEYMRTALPPQAK-EIEIKHYEH 405
                  57899***************9988877766663.666666665 PP

>> FSH1  Serine hydrolase (FSH1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.0   0.00032       1.2      77     136 ..     180     232 ..     147     265 .. 0.75
   2 !    7.6   0.0   0.00074       2.6     153     181 ..     360     388 ..     331     405 .. 0.72

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00032
        FSH1  77 kdekneyegleesldavkdyikengpfdGiiGFSqGaalaallaslleellkeashpslk 136
                 + ++ ++ ++ +++d++     e++     iGFSqG+a a + +sl + l+++     ++
  EPX73248.1 180 SLDDMAMFDIPNTVDYILHETGEKK--LSYIGFSQGTAQAFASLSLNNSLNNK-----VN 232
                 3346666777777777776666666..678**********9999999988763.....33 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.00074
        FSH1 153 eyyeedkiqtptLhvlGelDtvvdeerse 181
                 +++ +++i++p+L + G +Dt+++ e ++
  EPX73248.1 360 PLFPTSNIKCPILLIWGGKDTLINMEYMR 388
                 3568999****************966544 PP

>> DLH  Dienelactone hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0     0.054   1.9e+02      81     124 ..     188     229 ..     151     239 .. 0.79
   2 !   13.1   0.0   1.4e-05      0.05     134     184 ..     358     405 ..     338     421 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.054
         DLH  81 dlkaavaylksvpevstkkvgvvGfCmGGalalllaaevpevda 124
                 d+  +v+y+ +     +kk+  +Gf  G a a+++ + ++ ++ 
  EPX73248.1 188 DIPNTVDYILHET--GEKKLSYIGFSQGTAQAFASLSLNNSLNN 229
                 5556777777766..889**************999888877765 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 1.4e-05
         DLH 134 ekeleeaakikapilalfgeeDefipadevekleealkaanvdlelkvYpg 184
                 + +l  + +ik+pil + g++D+ i+++    ++ al  + +++e+k Y+ 
  EPX73248.1 358 QVPLFPTSNIKCPILLIWGGKDTLINME---YMRTALPPQAKEIEIKHYEH 405
                 55677789******************99...6999**99********9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (428 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       575  (0.0320709); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.66u 0.33s 00:00:00.99 Elapsed: 00:00:00.53
# Mc/sec: 2418.69
//
Query:       EPX73249.1  [L=554]
Description: alpha-amylase Aah4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.9e-37  127.2   0.0    2.5e-36  125.9   0.0    1.6  1  Alpha-amylase    Alpha amylase, catalytic domain
    0.00012   22.3   0.0    0.00022   21.4   0.0    1.4  1  DUF1966          Domain of unknown function (DUF1966)
  ------ inclusion threshold ------
      0.041   14.0   0.2      0.086   13.0   0.2    1.5  1  E3_UbLigase_RBR  E3 Ubiquitin Ligase RBR C-terminal domain


Domain annotation for each model (and alignments):
>> Alpha-amylase  Alpha amylase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.9   0.0   4.2e-40   2.5e-36       1     335 [.      62     358 ..      62     360 .. 0.84

  Alignments for each domain:
  == domain 1  score: 125.9 bits;  conditional E-value: 4.2e-40
                    --CHHHHCTCCCCCCCT-SCEEE-B-CE....-S-TTTTSS-SCE.CCE-CCC--CCCCCCHHHHHHCTT-EEEEEE--SC--TTSCCCHCCHHST CS
  Alpha-amylase   1 GDLkGiiekLdYlkeLGvtaiwlsPifk....spqadhgYdiady.tkidpefGtnedlkeLiskahekgikvilDlVvNHtsdehewfkeslkkk 91 
                    GD+ Gi ++LdY++eLG+ta+ +sP+++    s+q++ g     y ++++p+fGt ++l eL++++h +g+++++D+V+NH+  +      + +++
     EPX73249.1  62 GDWSGIQDHLDYIQELGFTALLISPVVEqvanSEQSNLGKSYYGYsYHLNPHFGTEKELRELSNALHMRGMYLMVDVVINHMDLQRIDEIADDEYD 157
                    9*******************************8889988777777569**********************************88877555444444 PP

                    TSGGGCCC-E......ESS-STTC-TTTTCSCEECTTTTCEEESSS-TTS-BB-TTTCCCCCCCCCCCCCCCTTT.-SEEEETTCCCTTTCCCCHC CS
  Alpha-amylase  92 gepkrdyyiwkegkeekeppnnwkslfdgsaweydekaqeyylhlflkklpdLnteneevrkelkdvvkfwlekg.idGfRlDvvkhvskveales 186
                      +++dy + +    ++ +  + ++++d+ +w  +e+ +           pd   +  +++++lk+ ++ +++ + +dG+R+  +k ++k      
     EPX73249.1 158 SLDEEDYDD-E----TCLVLED-EETNDEDDWAPCEQCN----------PPDHSIDLISLKENLKEYIRSFVKAFkVDGIRIASAKDYPK------ 231
                    433445444.2....3334444.3367888888888885..........466666666777777776777777777**************...... PP

                    CHCCHHHHHHHHHHHTCCGTT-EEEEE-TT-SCCCHCCCC-CGG-SICECCITTCGGGCC-CTSTTSB-SS-HHHHHHHHHHHHHHS-CCCTTCEE CS
  Alpha-amylase 187 ngeflheftqalnetvasrkevmtvgEvssdasedlrvyttearlelemvldfphldvaqkakikeqlksisakklkellkkwlkaleeaaeeavt 282
                      +f+ +f +a+         v++++E +s++    + +  ++  e    +++p +++a+ka+ +++l+   + +l+e++++++  + +   +  +
     EPX73249.1 232 --DFIPTFCEAAG--------VFCMAESFSQDA--IEICDGQNSIEGL--MNYPVQNAARKAFLSSNLNG--MVDLSEAMTDIRGLCRD-PLSLGN 310
                    ..*********99........89*******766..5777777776666..*************7777777..****************9.9***** PP

                    ES--TTS--HHHHTTSSTTTTHHHHHHHHHCCCTSSSEEEEETTCCCT----S CS
  Alpha-amylase 283 flgnHDqeRilsrlgddsaeaekklklaaillltlrGvpviYyGeEigmtggk 335
                     +++ D +R++s+ +d +      lk+a ++ll+ +G+p+ YyG+E+ + g+ 
     EPX73249.1 311 SVESPDLSRMASVSSDPA-----ALKNAIAFLLMGDGIPIMYYGQELALRGVT 358
                    ****************99.....6***********************998876 PP

>> DUF1966  Domain of unknown function (DUF1966)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.0   3.7e-08   0.00022       5      90 .]     411     487 ..     408     487 .. 0.89

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 3.7e-08
     DUF1966   5 dkstlalrKgpegsqvvtvlsnkGssgssytlslkssgyaagtevvdvlsCksvtvdssgeltvtmekGePrvlvpksklegsglC 90 
                 d+  ++l++g     v+tvl+n Gs   + + +++    a +++ +d+++Cksv v+++ ++ + +++G+P +l+p+ k  + g+C
  EPX73249.1 411 DSRVMLLQRGD----VITVLNNLGSFYIRFHYTVS----ALEHKWIDIITCKSVPVEDDRQVFI-IHNGDPMILYPEYKTYELGIC 487
                 56677888888....**********8888888887....678899****************988.799***********9999999 PP

>> E3_UbLigase_RBR  E3 Ubiquitin Ligase RBR C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.2   1.4e-05     0.086      21      86 ..     160     228 ..     144     232 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.4e-05
  E3_UbLigase_RBR  21 eekalekdkCkVleqketkegvkdeaCgkdvaegqa.glC..elHYkEyLvelinenkldPvvlfdede 86 
                      +e+  ++++C Vle  et++    + C+++  ++++ +l   +   kEy+ ++++  k+d + + + ++
       EPX73249.1 160 DEEDYDDETCLVLEDEETNDEDDWAPCEQCNPPDHSiDLIslKENLKEYIRSFVKAFKVDGIRIASAKD 228
                      45567899**********999999********99976776224579***************99988766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (554 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       477  (0.0266049); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.34s 00:00:01.00 Elapsed: 00:00:00.52
# Mc/sec: 3203.08
//
Query:       EPX73250.1  [L=271]
Description: ribosomal protein subunit S26 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.4e-19   68.9   1.1    2.1e-18   66.4   1.1    2.1  1  Sod_Fe_C     Iron/manganese superoxide dismutases, C-terminal
    0.00042   20.7   0.4     0.0012   19.3   0.4    1.8  1  Sod_Fe_N     Iron/manganese superoxide dismutases, alpha-hair
  ------ inclusion threshold ------
      0.051   13.5   0.0       0.39   10.7   0.0    2.2  2  Nepo_coat_N  Nepovirus coat protein, N-terminal domain


Domain annotation for each model (and alignments):
>> Sod_Fe_C  Iron/manganese superoxide dismutases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.4   1.1   3.5e-22   2.1e-18       5     102 .]     143     265 ..     139     265 .. 0.94

  Alignments for each domain:
  == domain 1  score: 66.4 bits;  conditional E-value: 3.5e-22
                 HHHHHHHHHSSHHHHHHHHHHHHHHSSSSEEEEEEEETTTEEEEEEEETTTBGGGGTTC........................EEEEEE-SGGGTHHHH CS
    Sod_Fe_C   5 laeaieedfgslekfkkefkaaalavfgsGwawLvldkkkkLeivttknqdnplvkeak........................plLalDvwehAYyldy 79 
                 +++ai+e+f+s e++  ++k+ a ++fg +w+w+vld+ ++L++++t ++ +p+ ++ +                        p++ + +w+hAY++d+
  EPX73250.1 143 IQQAIRENFESKEALLLKIKELASNTFGAAWIWVVLDDYNRLQVMRTFQAGSPFLWSRSqskdphlvpsvpdhstrprnyshvPIINICLWDHAYFTDF 241
                 789**************************************************997655678999********************************** PP

                 .TT-HHHHHHHHGGGBBHHHHHHH CS
    Sod_Fe_C  80 .qnkradYieafwnvvnWkeveer 102
                    +r++Yi+++++ +nW+ ve+r
  EPX73250.1 242 gLFQREQYIDTWFQSINWSVVENR 265
                 6689*****************986 PP

>> Sod_Fe_N  Iron/manganese superoxide dismutases, alpha-hairpin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.4     2e-07    0.0012      12      81 ..      50     123 ..      41     124 .. 0.85

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 2e-07
                 TTTTTTS-HHHHHHHHHTHHHHHHHHHHHHHHCHHHHCHCCHHHHHH....HHHHHHHHHHHHHHHHHHHHHTB CS
    Sod_Fe_N  12 daLePhisketlelHhdkHhktYvnnlNkalekleeakkkleelvlk....klekalrnnagghvnHslfwknl 81 
                   L P +s++ + + +d H    v+ lN+ ++++e++++++ ++v +      + a +  a+++ n ++f+++l
  EPX73250.1  50 RNLTPLFSEHGIRVAWDEHQGHVVKSLNDRVKGTELEDHSIFNIVFQtavlPEHAATFQFASQAYNNHFFFESL 123
                 5799************************************9999988777544556666788999999999987 PP

>> Nepo_coat_N  Nepovirus coat protein, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.17     1e+03      11      31 ..      77      97 ..      68     101 .. 0.82
   2 ?   10.7   0.0   6.5e-05      0.39      54      76 ..     163     185 ..     155     194 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.17
  Nepo_coat_N 11 kdakkgtvLatldirekiket 31
                 +d  kgt+L+ ++i++++ +t
   EPX73250.1 77 NDRVKGTELEDHSIFNIVFQT 97
                 68889*********9998776 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 6.5e-05
  Nepo_coat_N  54 hlptnifaGitlgvvfDaynrip 76 
                   l++n f    ++vv+D+ynr++
   EPX73250.1 163 ELASNTFGAAWIWVVLDDYNRLQ 185
                  5899*****************93 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (271 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       432  (0.024095); expected 358.6 (0.02)
Passed bias filter:                      300  (0.0167327); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.29s 00:00:00.85 Elapsed: 00:00:00.50
# Mc/sec: 1642.71
//
Query:       EPX73251.1  [L=276]
Description: PQ loop protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.2e-29   99.0   6.5      2e-17   62.7   1.1    2.5  2  PQ-loop          PQ loop repeat
     0.0035   18.2   2.6       0.46   11.3   0.3    2.8  3  ER_lumen_recept  ER lumen protein retaining receptor
  ------ inclusion threshold ------
      0.073   13.3   0.1       0.18   12.0   0.0    1.6  2  UPF0239          Uncharacterised protein family (UPF0239)
        0.1   12.5   0.0       0.41   10.6   0.0    2.0  1  Syndecan         Syndecan domain
        0.7   10.4   6.0        1.2    9.7   1.4    2.7  2  MerC             MerC mercury resistance protein


Domain annotation for each model (and alignments):
>> PQ-loop  PQ loop repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.7   1.1   5.5e-21     2e-17       3      59 ..      18      74 ..      16      76 .. 0.94
   2 !   38.8   0.4   1.6e-13   5.7e-10       3      58 ..     141     196 ..     140     199 .. 0.95

  Alignments for each domain:
  == domain 1  score: 62.7 bits;  conditional E-value: 5.5e-21
     PQ-loop  3 eilgyislvlwlvsyiPQiikNykrkSteGlSilflllwllGdilsllylilngfpp 59
                ++l  i++v+w+v++iPQ ikNy++kSt Gl +lf++ w++++i+  +y+++++ ++
  EPX73251.1 18 TALAVIGTVCWCVQLIPQAIKNYRSKSTAGLDTLFIFSWVIASIPLSVYNLVQDLNI 74
                67999***********************************************99886 PP

  == domain 2  score: 38.8 bits;  conditional E-value: 1.6e-13
     PQ-loop   3 eilgyislvlwlvsyiPQiikNykrkSteGlSilflllwllGdilsllylilngfp 58 
                 e++g ++++l  + ++PQ+i++++ + + G+S  fl ++ +G +ls+++l +++++
  EPX73251.1 141 ELMGVLATILVNIGFLPQYIQIFRQRAVRGISYIFLTIDSAGALLSFISLPFDRWD 196
                 679**********************************************9999887 PP

>> ER_lumen_recept  ER lumen protein retaining receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.8   0.0    0.0065        23     106     137 ..      29      60 ..      13      70 .. 0.85
   2 !   11.3   0.3   0.00013      0.46      77     130 ..     116     176 ..      63     190 .. 0.71
   3 ?    1.1   0.1      0.18   6.5e+02       3      65 ..     169     234 ..     167     239 .. 0.50

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0065
  ER_lumen_recept 106 svAilPQlillqktgevesltshyvfalglyR 137
                      +v ++PQ i  +++++   l++ ++f+++++ 
       EPX73251.1  29 CVQLIPQAIKNYRSKSTAGLDTLFIFSWVIAS 60 
                      67899*********************999875 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 0.00013
  ER_lumen_recept  77 psllla..llfhpg.....ssktllevlwtfsiiLesvAilPQlillqktgevesltshyv 130
                      +s+ l   ++++ +     + ++ +e++ + + iL  +  lPQ+i++ +++ v  +   ++
       EPX73251.1 116 LSAGLQamCILTIKlgirrHVEWPVELMGVLATILVNIGFLPQYIQIFRQRAVRGISYIFL 176
                      3433333333333345556899******************************999976655 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.18
  ER_lumen_recept   3 aGlSlktqilyalvfltryldl.flylre..eislyntlmkialillsiy....iiylilvkfketyeke 65 
                       G+S+  + +     l  ++ l f ++ +   i+       ++++++ i+    i  +il k  ety+ +
       EPX73251.1 169 RGISYIFLTIDSAGALLSFISLpFDRWDVlaAID----YGLVFVLEMGIFvlvlIFNVILGKKDETYDDN 234
                      6777777777777777777777553333233333....22233333434400003344555577777766 PP

>> UPF0239  Uncharacterised protein family (UPF0239)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.1       4.4   1.6e+04      30      39 ..     119     128 ..     116     130 .. 0.77
   2 ?   12.0   0.0     5e-05      0.18      22      76 ..     202     258 ..     196     264 .. 0.68

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 4.4
     UPF0239  30 ifqlvCilAi 39 
                  +q +Cil i
  EPX73251.1 119 GLQAMCILTI 128
                 57999*9976 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 5e-05
     UPF0239  22 rYGLfl...GAifqlvCilAiillpsskseesveeeaesseeksseqvkkpkaaaaqr 76 
                  YGL +     if lv i  +il +++++ + +ee+   ++e ++ +++kpk  +++ 
  EPX73251.1 202 DYGLVFvleMGIFVLVLIFNVILGKKDETYDDNEENETRDDE-ETVEEEKPKILVRNP 258
                 577643133359**********88888888876555555555.555567788766665 PP

>> Syndecan  Syndecan domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00011      0.41       4      49 ..     193     238 ..     191     250 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00011
    Syndecan   4 erpevlaaviggvvvgllfaillvlflvY.RmrKKDEGSYaLdepkk 49 
                 +r +vlaa+  g v  l + i++++++    + KKDE +Y+ +e+++
  EPX73251.1 193 DRWDVLAAIDYGLVFVLEMGIFVLVLIFNvILGKKDE-TYDDNEENE 238
                 6789*********999998888766655414789**9.566555554 PP

>> MerC  MerC mercury resistance protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.7     0.049   1.8e+02      37     104 ..      51     112 ..      16     120 .. 0.76
   2 ?    9.7   1.4   0.00033       1.2      47      84 ..     121     158 ..      97     231 .. 0.80

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.049
        MerC  37 llhqvllilvvaigllalvvgyrrhrktsvlvlgalGllillvalflgteaeetllfgslwqvltvlG 104
                 l+   ++i +++++++ lv       k ++ +  +l+l+ ++  l++g e +++       + ++v G
  EPX73251.1  51 LFIFSWVIASIPLSVYNLVQDLNIALKIQPELFQLLSLVTFFQCLIYG-EGWSAR-----KSLFVVGG 112
                 466778888999999999999999999999999999999999999999.555544.....23344444 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00033
        MerC  47 vaigllalvvgyrrhrktsvlvlgalGllillvalflg 84 
                  a+++l++ +g rrh ++ v ++g+l+ ++++++ + +
  EPX73251.1 121 QAMCILTIKLGIRRHVEWPVELMGVLATILVNIGFLPQ 158
                 578999**************************996655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (276 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       693  (0.0386525); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.63u 0.32s 00:00:00.95 Elapsed: 00:00:00.53
# Mc/sec: 1580.80
//
Query:       EPX73252.1  [L=448]
Description: serine protease Psp3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-35  123.3   5.9    1.8e-35  122.7   5.9    1.2  1  Peptidase_S8  Subtilase family
    5.5e-13   49.4   0.0    9.8e-13   48.6   0.0    1.4  1  Inhibitor_I9  Peptidase inhibitor I9


Domain annotation for each model (and alignments):
>> Peptidase_S8  Subtilase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.7   5.9     2e-39   1.8e-35       1     281 [.     192     425 ..     192     442 .. 0.85

  Alignments for each domain:
  == domain 1  score: 122.7 bits;  conditional E-value: 2e-39
                   -TT-EEEEECS-B-TT-TTTGGGEEE..EEEE---TTSG.GGEETT-SS-TT-SC-SSS....HHHHHHHHHH-B..SSSSSB-SSTTSEEEEEE-S CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_S8   1 gkgvlvavlDtGvdpshpdlsvttdgerklvdvideegagfngadsettstnwarddngnsieHGthvAGiaaanapeegekngvapgakilsvkvl 97 
                   g+gv+  v+DtGv+ +h d++                g+   ga+ ++++ ++++++      HGthvAG++a++        gva + ki +vkv+
    EPX73252.1 192 GEGVTAYVIDTGVNVNHQDFE----------------GRASWGATIPNGEKDIDNHG------HGTHVAGTIAGK------TFGVAKNSKIVAVKVM 260
                   6888999************99................33456888888888888877......************......99************** PP

                   STTSB-HH..HHHHHHHHHHHH.CT-S......EEEE-EESCETTCHHCHHHHHHHHHHHH.CCT-EEEEE--SS-T-HHEEE-TTCEECTTTSTTC CS
                   xxxxxxxxxxxxxxxxxxxxxx.xxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_S8  98 dtsggsmetgteliraieeaae.dkvd......vinmslgestslpktgrsiealainravnkkgvlvviSaGNngktgsslqagspvgtpstsknv 187
                    ++g+  +t +++i++ie a++ +k d      v nmslg++ sl          a+ +a+ k g ++ ++aGN+        + ++  +ps   ++
    EPX73252.1 261 RADGT-GTT-SDIIKGIEFAFKeSKKDedsvasVANMSLGGDASLALDL------AVSAAI-KGGLFFAVAAGNDA------EDACN-TSPSRVSSA 341
                   77775.555.9***********88888*************333333333......888899.8899**********......66666.56888999* PP

                   EEEEEESTTSSB-TT--B-TT.......-EEEE-S-CCCCCCCCCHHHTTTHHEEEE-SHHHCHHHHHHHHHHHHHHHTT..--HHHHHHHHHCCS CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxx RF
  Peptidase_S8 188 itvgayttegkiapfSsrGpssdgklkpdivapGgnivstwsrqsnnsaglssyqsmsGTSmAsPnaagaaAlllsalpk..ltpetvraallntA 281
                   +tvga+t  + i++fS++G+++      di apG+ i+s+w   +++s      ++ sGTSmAsP++ag aA  +s  p+   +p+++++++l+ A
    EPX73252.1 342 MTVGAMTWTDGISSFSNHGSCV------DIFAPGSLILSDWIGSDKAS------MLLSGTSMASPHVAGLAAYYISLEPSlaNKPADLKKYMLKYA 425
                   *********************9......6************9999555......689***********************8866666776666655 PP

>> Inhibitor_I9  Peptidase inhibitor I9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.6   0.0   1.1e-16   9.8e-13       2      80 ..      76     156 ..      75     158 .. 0.91

  Alignments for each domain:
  == domain 1  score: 48.6 bits;  conditional E-value: 1.1e-16
                   EEEEE-TTS-HHHHHHHHHHHHH.....HHHHTT..--EEEEEEESS..SSSEEEEEE-GGGHHHHHTSTTEEEEEEEEEEE CS
  Inhibitor_I9   2 YIVtfkeaakaakkassheswhqsl.lksvlkgedsakagilysYki..lfnGfavklteeqaeklrkrpeVesVepDqsvr 80 
                   YIV fk+ +++ak ++sh++w+q   +k++l  +d ++  ++++++i  +f G+a+++++  + +l+k+p+++ VepD++++
    EPX73252.1  76 YIVMFKPSVDKAK-INSHHEWIQHQhHKRSLDWQDVSTFLLKHTFEIgdSFMGYAARFSPWLVNELKKHPDIAIVEPDRVMH 156
                   ************9.*********55366676666999******************************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (448 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       348  (0.0194099); expected 358.6 (0.02)
Passed bias filter:                      289  (0.0161191); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 2970.05
//
Query:       EPX73253.1  [L=365]
Description: astra associated protein 1 A [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.3e-12   45.4  10.2      0.011   16.5   0.0    5.7  6  WD40         WD domain, G-beta repeat
    4.2e-06   27.0   0.5      0.038   14.3   0.0    4.9  6  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   1.3e-06     0.011       3      37 ..       6      40 ..       4      41 .. 0.88
   2 ?   -0.5   0.0       0.3   2.7e+03      22      38 .]      66      82 ..      46      82 .. 0.59
   3 ?   -2.8   0.0       1.6   1.4e+04      13      33 ..     127     140 ..     114     144 .. 0.57
   4 !    8.5   0.0   0.00045         4       8      35 ..     244     273 ..     236     274 .. 0.81
   5 !    7.5   0.0   0.00091       8.2      14      37 ..     297     320 ..     284     321 .. 0.82
   6 !   14.9   0.1   4.2e-06     0.037       4      38 .]     328     363 ..     325     363 .. 0.87

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 1.3e-06
                EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37
                + ++l+GH s+vt++af+  ++++ sG+++g v  W
  EPX73253.1  6 PFYVLRGHsSNVTAIAFDEKNHLF-SGDENGFVICW 40
                6789****666*********9997.8**9**99999 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.3
                SSEEEEEETTSEEEEEE CS
        WD40 22 gawlasGsdDgtvriWd 38
                 + l++ s+D+ + +W+
  EPX73253.1 66 TDTLCTQSRDCRLTVWK 82
                34465558899999995 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 1.6
                 EEEEEEETTSSEEEEE.ETTSE CS
        WD40  13 vtslafspdgawlasG.sdDgt 33 
                 +++l      ++  ++ s+D++
  EPX73253.1 127 INAL------TF--CSfSYDKN 140
                 4555......33..23345655 PP

  == domain 4  score: 8.5 bits;  conditional E-value: 0.00045
                 ESS.SSEEEEEEETTSSEEE.EEETTSEEE CS
        WD40   8 tGH.ssvtslafspdgawla.sGsdDgtvr 35 
                 + H ++v s+ ++++g+ l  sG dD+ v+
  EPX73253.1 244 KSHsQPVLSVNYNKSGNELYsSGADDRIVK 273
                 579778*************73567899987 PP

  == domain 5  score: 7.5 bits;  conditional E-value: 0.00091
                 EEEEEETTSSEEEEEETTSEEEEE CS
        WD40  14 tslafspdgawlasGsdDgtvriW 37 
                  +l+   d++ +a++++Dg  ri+
  EPX73253.1 297 QCLQIRGDNRIIATAGWDGRTRIY 320
                 68999999**************98 PP

  == domain 6  score: 14.9 bits;  conditional E-value: 4.2e-06
                 EEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 
                 l +l+ Hss +++++f+++++ +a +s+D  + +W+
  EPX73253.1 328 LAVLKYHSSmINCVSFCSYSNIIALASKDSRISLWK 363
                 5677889778************986799*******6 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.26   2.4e+03      37      76 ..      13      51 ..       9      66 .. 0.69
   2 ?   -1.4   0.0      0.32   2.9e+03      44      73 ..     135     163 ..     128     181 .. 0.65
   3 ?    0.8   0.0     0.069   6.2e+02      51      66 ..     205     220 ..     173     228 .. 0.74
   4 !    3.5   0.0    0.0096        86      19      62 ..     226     271 ..     219     285 .. 0.83
   5 !   14.3   0.0   4.2e-06     0.038      42      90 ..     297     344 ..     281     346 .. 0.89
   6 !    3.9   0.0    0.0074        67       1      21 [.     341     361 ..     341     364 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.26
  ANAPC4_WD40 37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhsl 76
                 ++s+v+++a+ ++++l+  + ++g v   +  + + ++++
   EPX73253.1 13 HSSNVTAIAFDEKNHLF-SGDENGFVICWSLLDMRPLQAW 51
                 67889999999988754.6777777766666655555555 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.32
  ANAPC4_WD40  44 LaWkpdgklLavaysdgevrlldaesgkvv 73 
                  +++ ++ k++av+    +v  +d+++++ +
   EPX73253.1 135 FSYDKNAKVIAVSNTI-NVDGIDIYEAESL 163
                  5677777888776543.4555555555544 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.069
  ANAPC4_WD40  51 klLavaysdgevrlld 66 
                   +Lav+y+ g+v  ++
   EPX73253.1 205 LFLAVGYESGHVAQFQ 220
                  479*******998665 PP

  == domain 4  score: 3.5 bits;  conditional E-value: 0.0096
  ANAPC4_WD40  19 llvfRlngqrvwtl..eedkedsevrsLaWkpdgklLavaysdgev 62 
                  ++   l+++ vw +   e+++++ v s++++++g+ L  + +d ++
   EPX73253.1 226 VRNVCLDFRDVWVMtyFEKSHSQPVLSVNYNKSGNELYSSGADDRI 271
                  5555678889998877789999*************99999888766 PP

  == domain 5  score: 14.3 bits;  conditional E-value: 4.2e-06
  ANAPC4_WD40  42 rsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  ++L+ + d++++a a  dg+ r+++ +s  v+  l+++s+  ++c++++
   EPX73253.1 297 QCLQIRGDNRIIATAGWDGRTRIYSCKSLSVLAVLKYHSS-MINCVSFC 344
                  57999*********************************99.6***9986 PP

  == domain 6  score: 3.9 bits;  conditional E-value: 0.0074
  ANAPC4_WD40   1 lswcptmDLiAlatedgellv 21 
                  +s+c+  ++iAla++d+++ +
   EPX73253.1 341 VSFCSYSNIIALASKDSRISL 361
                  589*************99976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (365 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       455  (0.0253779); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.29s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 2390.60
//
Query:       EPX73254.1  [L=699]
Description: hypothetical protein SOCG_01009 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-09   36.6   3.0    4.1e-09   36.0   3.0    1.3  1  zf-C3H1   Putative zinc-finger domain
  ------ inclusion threshold ------
      0.012   15.0   3.1      0.012   15.0   3.1    3.1  3  Bul1_C    Bul1 C terminus


Domain annotation for each model (and alignments):
>> zf-C3H1  Putative zinc-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.0   3.0   4.6e-13   4.1e-09       1      22 []     604     625 ..     604     625 .. 0.98

  Alignments for each domain:
  == domain 1  score: 36.0 bits;  conditional E-value: 4.6e-13
     zf-C3H1   1 LCpyElaGGvCnDpsCefQHFr 22 
                 +C+yE++GGvCnD++Ce  HFr
  EPX73254.1 604 MCKYETTGGVCNDEQCEGFHFR 625
                 7********************9 PP

>> Bul1_C  Bul1 C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.3   1.8         1   9.4e+03     166     200 ..     114     148 ..      97     167 .. 0.41
   2 ?   -2.1   6.6      0.23     2e+03     132     211 ..     330     411 ..     305     432 .. 0.50
   3 ?   15.0   3.1   1.3e-06     0.012      61     134 ..     441     520 ..     434     528 .. 0.81

  Alignments for each domain:
  == domain 1  score: -4.3 bits;  conditional E-value: 1
      Bul1_C 166 slseksnsssssklssstssassteaesstskkfk 200
                  +s   + +s+ +++ +   ++ste++ss ++k +
  EPX73254.1 114 ESSFAGSRKSNLNRNRTPRMEKSTEPRSSPNRKGS 148
                 22222222222222222223333333333333333 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.23
      Bul1_C 132 anDveslanlkvk...vtelnevfkkqvetlkdesesslseksnsssssklssstssassteaesstskkfkeqivkeWekkk 211
                 ++  esla l+ k   ++++ e++ k  ++ k ++ ++ +e s    s k s++++++s  + ess+s++ k++i++  +k +
  EPX73254.1 330 NSRFESLALLRKKeneIRKMTEMIMKLESSKKATKPAIPKEPSPFV-STKESDQKEQSSRLTMESSNSEQSKHKIAQPTSKAT 411
                 4456677777655111444444444444444444433333333333.333333344444444454666666666664433333 PP

  == domain 3  score: 15.0 bits;  conditional E-value: 1.3e-06
      Bul1_C  61 siPiklnse......lllnkeklkeikktfkefekkikeykkkfeenkeklneLynlsreistkreLkFtdfiskqlanD 134
                  iP kl+s+      l+ +k+ l  ++k+ ++ ek+ ++yk+ ++++ke l++Ly +++e+ +k  ++ + ++ ++ ++D
  EPX73254.1 441 EIPTKLQSQseenqsLVTQKDELARVNKLIEDEEKELNNYKAIINSKKEALTKLYFRKKELLSKVGVELSTLLRSESIKD 520
                 5777775532222227889*****************************************99988888888777776666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (699 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1569  (0.0875119); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.79u 0.39s 00:00:01.18 Elapsed: 00:00:00.58
# Mc/sec: 3656.41
//
Query:       EPX73255.1  [L=1006]
Description: hypothetical protein SOCG_01010 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1006 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2575  (0.143622); expected 358.6 (0.02)
Passed bias filter:                      480  (0.0267723); expected 358.6 (0.02)
Passed Vit filter:                        99  (0.00552178); expected 17.9 (0.001)
Passed Fwd filter:                        47  (0.00262145); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.87u 0.41s 00:00:02.28 Elapsed: 00:00:00.68
# Mc/sec: 4482.78
//
Query:       EPX73256.1  [L=371]
Description: alpha-1,6-mannosyltransferase Och1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.1e-17   62.6   0.0    9.6e-17   61.4   0.0    1.7  1  Gly_transf_sug  Glycosyltransferase sugar-binding region cont


Domain annotation for each model (and alignments):
>> Gly_transf_sug  Glycosyltransferase sugar-binding region containing DXD motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.4   0.0   5.4e-21   9.6e-17       4      95 ..     133     220 ..     130     223 .. 0.93

  Alignments for each domain:
  == domain 1  score: 61.4 bits;  conditional E-value: 5.4e-21
  Gly_transf_sug   4 ekkaieslakahpdyqvvvlskelekvrvaildlefllsd.tpwfeeakkllplfialsDllRlaiLykyGGiYlDtDvivlkslrnsigaee 95 
                     + ++++ + ++hp+y + vl+++++    ++l+++++ +   ++++ a++++p ++ ++D++R+++L++ GG+Y+D+D++++k++ n++++ee
      EPX73256.1 133 VLQYTRFWGSNHPSYIHKVLDDSQS----ERLVINDFGDPsISKISSAYTMMPFPVLKADFFRYLVLLARGGVYTDIDTTPIKHI-NNWIPEE 220
                     56788999***************99....9999999999877799****************************************.***9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (371 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       444  (0.0247643); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.31s 00:00:00.90 Elapsed: 00:00:00.52
# Mc/sec: 2162.91
//
Query:       EPX73257.1  [L=1162]
Description: RhoGEF Rgf2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.7e-74  248.4   0.2    1.9e-73  247.5   0.0    1.6  2  CNH       CNH domain
    7.5e-37  127.3   0.2    1.3e-36  126.6   0.2    1.4  1  RhoGEF    RhoGEF domain
      1e-27   96.9   0.0    2.7e-27   95.5   0.0    1.7  1  PH_5      Pleckstrin homology domain
    3.5e-15   55.8   0.0    6.3e-15   55.0   0.0    1.4  1  DEP       Domain found in Dishevelled, Egl-10, and Pleckstrin


Domain annotation for each model (and alignments):
>> CNH  CNH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       1.7   7.5e+03     135     154 ..     373     392 ..     361     395 .. 0.82
   2 !  247.5   0.0   4.2e-77   1.9e-73       4     274 ..     837    1119 ..     834    1120 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 1.7
         CNH 135 fqvpaevfsisvlkpklcvg 154
                 f++ + ++s ++ k++lc++
  EPX73257.1 373 FTILTDCYSPTCSKNRLCYS 392
                 556689999999******97 PP

  == domain 2  score: 247.5 bits;  conditional E-value: 4.2e-77
         CNH    4 itggqrlllGteeGlyllnl....sdeskpvkieklssvtqlaVleelnlllllsdkqLyvydlsaLeekeeesqlakkksenltqklpetkgchff 96  
                  ++ g+++++Gt  G+y++ +      +++p+  + + +++q++++ee+nlll+++d++Ly ++l+ L+++e+ s     ks         t +++f+
  EPX73257.1  837 YDAGRKIVFGTYRGIYMSLRkgsnGVCLGPRLKIPITNISQVDLIEEHNLLLIVADRTLYECSLDLLTNAEQIS----VKS-----LRRITGHVSFV 924 
                  6889****************998888999999999999*********************************554....234.....6789******* PP

         CNH   97 airngyskekfLvvavks.....kivllewneplkkfk..............kklrefqvpaevfsisvlkpklcvgvakgFelvnldegaaeslld 174 
                  +   g + +++Lv+avks     ++ ++e  ++ k++               k ++e+q+p e++si++lk+klcvg +kgF++v+l+++  +sll+
  EPX73257.1  925 K--SGFCLQRVLVCAVKStvlstTLRIFEAGNTSKSKRsqslkkpfggsttlKIFTELQMPMEALSIHFLKTKLCVGNTKGFDIVSLESAVFQSLLN 1019
                  *..***************************998665559********************************************************** PP

         CNH  175 pednsldfaarkenlkplaviqisedefLlcydefavyvdlqGrrsr.dseleWegkPesvaclepyllafhknfieirsvetgelvqeisgkklrf 270 
                  p+d+s+ f+++ken++p+ +++++ +efLlcy+efa++v+++G+rsr  + ++Weg+P s+a+++pyll+f+++fie+r++et+elvq+i+g+++++
  EPX73257.1 1020 PADTSFRFLEKKENVRPIEMFRLK-GEFLLCYSEFAFFVNTNGWRSRqGWLIHWEGQPSSFALCYPYLLGFEQDFIEVRHAETTELVQIIKGHNIKL 1115
                  ************************.**********************99************************************************ PP

         CNH  271 llsg 274 
                  l++g
  EPX73257.1 1116 LTDG 1119
                  9876 PP

>> RhoGEF  RhoGEF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.6   0.2   2.8e-40   1.3e-36       1     182 []     453     634 ..     453     634 .. 0.94

  Alignments for each domain:
  == domain 1  score: 126.6 bits;  conditional E-value: 2.8e-40
                 HHHHHHHHHHHHHHHHHHHHHHTHCCCHHCT....CCHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHH.HHHTTSS-S-SHHHHHHHHSTHHHHHHHHH CS
      RhoGEF   1 vikElleTErsYvrdLkvlvevylkplsele....vlseeeikiiFsnieeilelhrsflleeLeerlkeseeqkeaqsigdvflkfadkfkkYseYcs 95 
                 vi E++ TEr++vrd +++ ++++kpls+++     + +  ik++F+ni ++++++ s l ++L+ ++   + q   +++gd+fl++ +kf+ +  Y +
  EPX73257.1 453 VIFEIIYTERDFVRDIEYIRDFWIKPLSSSNvipeKFRQPFIKTVFHNIMQVHAVN-SRLSNALNRVQ---TLQPIVHTVGDIFLDYVPKFEPFIRYGA 547
                 799*************************999555555556666*************.99988888888...677889********************** PP

                 CHHHHHHHHHHHHHHHHHHHHHHHHHHTSGGGTT--HHHHTTHHHHHHHHHHHHHHHHHHTS-TTSHHHHHHHHHHHHHHHHHHHHH CS
      RhoGEF  96 nypnalkllkelskknkkfkafleeaeerpecskldLeslLikPvqRlprYpLLLkellkntpeshpdyealkkaleaikevaseiN 182
                 n++ a+  +++++ +n++f+++ +e+e+ +e +kl+L+ +L kPv Rl rYpLLL+ +lk+t++++pd e++ k++e+++e+++++N
  EPX73257.1 548 NQTVAKFEFEREKGSNPTFARYTHEVERLRESRKLELNGYLTKPVTRLARYPLLLNGVLKYTEQDNPDLENIPKVIEMLREFLTKLN 634
                 ***********************************************************************************9988 PP

>> PH_5  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.5   0.0     6e-31   2.7e-27       1     135 []     672     805 ..     672     805 .. 0.91

  Alignments for each domain:
  == domain 1  score: 95.5 bits;  conditional E-value: 6e-31
        PH_5   1 lifkgtlkkketsksesa...diqvyLfDhalLlvkiktvnkreqykvyrrPiPLeLLvvseaedvpkkkglkkrkssslikkkksssnlvlvpekaek 96 
                 lifkgt+k k +  +  +    i+++L+D++lLl+k k+  kr+q+k+  rP+PLeLLv+s ++d+ ++ ++++r+ss+++++    ++ +    ++++
  EPX73257.1 672 LIFKGTVKLKASGYAYDDtegGIHMFLLDNYLLLTKLKHGYKRQQHKLQLRPLPLELLVISCIDDTSSRGSVSRRPSSTILTNPILIAKGS----SSSP 766
                 79***99988877665555689******************************************************998888777766664....5788 PP

        PH_5  97 kkgyaitflhlGkkgyeltLyastlaarqkwlekiekqq 135
                  k y + ++ lG +g+++  y +tl+ar++w ++ie+qq
  EPX73257.1 767 MKSYGLHLQLLGSRGFQIDFYLNTLIARDQWKQHIERQQ 805
                 9*************************************8 PP

>> DEP  Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.0   0.0   1.4e-18   6.3e-15       4      72 .]     219     286 ..     216     286 .. 0.96

  Alignments for each domain:
  == domain 1  score: 55.0 bits;  conditional E-value: 1.4e-18
                 SCEEECTTEEESSE-HHHHHHHHHHHHTSSSSHHHHHHHHHHHHHCTSCECSSSSHCC--SSSSS-EEE CS
         DEP   4 lkdrrkhlktypncftGseavdWLldnldiedreeAvalgqlLldqgliehvedkhqeFrdskqafYqf 72 
                 + dr k++ +y+++f+G+eavd+Ll+ +++ dr+ A+ lg++L +q+l+++v+++h+ +rds + +Yqf
  EPX73257.1 219 VGDRVKDGLLYKDAFLGCEAVDVLLQIIRTNDRNLALLLGRALDSQKLFHDVTYSHR-LRDSRKEVYQF 286
                 6689999**************************************************.**********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1162 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       551  (0.0307323); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.79u 0.33s 00:00:01.12 Elapsed: 00:00:00.50
# Mc/sec: 6974.00
//
Query:       EPX73258.1  [L=392]
Description: translation initiation factor eIF4A [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.7e-46  156.8   0.6    4.7e-46  156.8   0.6    1.5  2  DEAD             DEAD/DEAH box helicase
    1.2e-31  109.3   0.3    8.7e-31  106.6   0.1    2.4  3  Helicase_C       Helicase conserved C-terminal domain
    4.8e-06   26.7   0.0    7.8e-06   26.0   0.0    1.3  1  ResIII           Type III restriction enzyme, res subunit
     0.0001   22.1   0.1    0.00019   21.2   0.1    1.5  1  AAA_30           AAA domain
     0.0002   21.7   1.6     0.0033   17.7   0.4    2.3  2  AAA_19           AAA domain
  ------ inclusion threshold ------
      0.036   13.8   0.1        0.1   12.4   0.0    1.7  2  fragilysinNterm  N-terminal domain of fragilysin
       0.07   12.6   0.1       0.12   11.8   0.1    1.3  1  UvrD-helicase    UvrD/REP helicase N-terminal domain
      0.079   12.8   0.0       0.16   11.8   0.0    1.5  1  Helicase_RecD    Helicase
      0.096   12.6   0.1       0.28   11.1   0.1    1.7  1  Fanconi_A        Fanconi anaemia group A protein
        0.1   12.6   0.3        0.4   10.7   0.3    2.2  1  Flavi_DEAD       Flavivirus DEAD domain


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.8   0.6   2.6e-49   4.7e-46       2     175 ..      44     208 ..      43     209 .. 0.96
   2 ?   -2.6   0.0       2.2   3.9e+03      83     104 ..     289     315 ..     249     331 .. 0.49

  Alignments for each domain:
  == domain 1  score: 156.8 bits;  conditional E-value: 2.6e-49
                 HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCSE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   2 diQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvdi 100
                 +iQ++ai  ilg++dvl++a+ G+GKT+ f+i vlq++   ++ ++ +ali++PtreLa+q+ + +  +++ ++++++++igg+  rd++++l++gv++
  EPX73258.1  44 AIQQRAIMPILGERDVLAQAQSGTGKTATFSISVLQKID--TSLKQCQALILAPTRELAQQIQKVVVALGDLMNVECHACIGGTLVRDDMAALQAGVHV 140
                 79************************************4..588889**************************************************** PP

                 EEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 101 vvgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkdvkk 175
                 vvgtpgr++d+++++ l ++ v+++VlDEad++l+ gf+d+i  i++ l       + + qv++lSAT+p+dv +
  EPX73258.1 141 VVGTPGRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKDQIYDIFQLL-------PPSAQVVLLSATMPQDVLE 208
                 *************************************************.......56778*********99865 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 2.2
                 TTSSHHHHHHHH....HTT.CSEEEEE CS
                 xxxxxxxxxxxx....xxx.xxxxxxx RF
        DEAD  83 ggvaardqlskl....dng.vdivvgt 104
                 +g+  ++q+++l    + g  +i+++t
  EPX73258.1 289 HGDMDQSQRDTLmhefRTGsSRILITT 315
                 333333444444221233345555544 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       3.4     6e+03      11      31 ..      82     102 ..      75     120 .. 0.67
   2 ?   -1.2   0.0       1.4   2.6e+03      40      74 ..     192     225 ..     173     229 .. 0.68
   3 !  106.6   0.1   4.8e-34   8.7e-31       2     111 .]     245     353 ..     244     353 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 3.4
                 HHTTTTSEEEEEESSHHHHHH CS
  Helicase_C  11 kleeeggkilifvntidrlek 31 
                 +++ ++ ++li ++t++ +++
  EPX73258.1  82 DTSLKQCQALILAPTRELAQQ 102
                 455677888888888885533 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 1.4
                 TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESG CS
  Helicase_C  40 gikvavlhgelpqnereeileqfnkgesdvLiatd 74 
                 + +v+ l +++pq + +e+ ++f ++ +++L+  d
  EPX73258.1 192 SAQVVLLSATMPQ-DVLEVTTKFMRDPIRILVKKD 225
                 5677777776665.568888999888888888766 PP

  == domain 3  score: 106.6 bits;  conditional E-value: 4.8e-34
                 HHHHHHHHHHHTTTTSEEEEEESSHHHHHH.HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHH CS
  Helicase_C   2 kleallellkleeeggkilifvntidrlek.vklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvts 99 
                 kl++l++l+ +++   +++if+nt+++++  ++ l+e+ +++v  +hg++ q++r+  +++f+ g+s++Li+td ++rGid+++v+lVin+dlp n ++
  EPX73258.1 245 KLDTLCDLY-ETVTVTQAVIFCNTRRKVDWlTEQLTER-DFTVSSMHGDMDQSQRDTLMHEFRTGSSRILITTDLLARGIDVQQVSLVINYDLPANREN 341
                 788999998.999***************7766666444.6*********************************************************** PP

                 HHHHHTTSSSTT CS
  Helicase_C 100 yiqriGRtgRag 111
                 yi+riGR gR+g
  EPX73258.1 342 YIHRIGRGGRFG 353
                 **********86 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.0   4.3e-09   7.8e-06      23     170 ..      55     203 ..      18     204 .. 0.78

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 4.3e-09
                 TTSEEEEEESTTSTHHHHH.HHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG........GEEEESSS-B--.......-SEEEEEHHHHHH CS
      ResIII  23 rdkrglikmaTGtGKTlva.aklierllkkgkeekflflvprkslleqtleefkkflseayke....igkkvsgdkkkakekdstnkkilvttiqslda 116
                 +++ +l ++  GtGKT +  +++ +++ ++ k+ ++l+l+p+++l +q ++ +  + +  + e    ig+ +  d   a    +   +++v t  +++ 
  EPX73258.1  55 GERDVLAQAQSGTGKTATFsISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNVEchacIGGTLVRDDMAA---LQAGVHVVVGTPGRVHD 150
                 6778999***********99******************************77643333333223334777777666666...6999************* PP

                 TH........HHHTTT-SEEEEETGGGTTS.TTTHHHHHT-...--.SEEEEEESS-S CS
      ResIII 117 dseeeeeeseellrdrfdviiiDEaHrlgakkswreilekf...ke.avllglTATpe 170
                  +     ++  l  d+ ++++ DEa  + +  +  +i + f   ++ a ++ l+AT++
  EPX73258.1 151 MI-----QRRALPTDAVQMFVLDEADEMLSRGFKDQIYDIFqllPPsAQVVLLSATMP 203
                 99.....88999999999*******999995433346555522233477778899975 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.1     1e-07   0.00019       4     100 ..      44     173 ..      41     199 .. 0.62

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 1e-07
      AAA_30   4 aeQaaavealltsgdrvavltGpAGtGKt..talkalreaweaa.ggrviglAptgkaAkvLae....................elgieastiakllkr 79 
                 a Q++a+  +l+++d  +++++  GtGKt  +++++l+++ ++  + + ++lApt + A+++++                                   
  EPX73258.1  44 AIQQRAIMPILGERD--VLAQAQSGTGKTatFSISVLQKIDTSLkQCQALILAPTRELAQQIQKvvvalgdlmnvechaciggtL-------------- 126
                 56999999******9..999********8225688999999999789****************6333333333222222222220.............. PP

      AAA_30  80 lk...........................grarlepgtllivDEagmv 100
                                              ++   ++ ++++ DEa  +
  EPX73258.1 127 -VrddmaalqagvhvvvgtpgrvhdmiqrRALPTDAVQMFVLDEADEM 173
                 .02223333344444445555555555432233444588888888544 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.4   1.9e-06    0.0033       1      67 [.      46     112 ..      46     198 .. 0.68
   2 ?    2.7   0.0     0.083   1.5e+02      39      90 ..     255     304 ..     243     334 .. 0.77

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 1.9e-06
      AAA_19   1 qreave.alkekvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAakelrerlaalga 67 
                 q++a+   l e+ +l  a  GtGKT +    v   +++  +k  + l++a+t+  a+++++ + alg 
  EPX73258.1  46 QQRAIMpILGERDVLAQAQSGTGKTATFSISVLQKIDTS-LKQCQALILAPTRELAQQIQKVVVALGD 112
                 7888877999999**************998877777776.566999**************98855443 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.083
      AAA_19  39 gvkpeeillvaftgrAakelrerlaalgaeatTiHrlalldfddlltealel 90 
                 +v + + ++ + t+r ++ l+e+l++ +   + +H+   +d  ++ t + e+
  EPX73258.1 255 TVTVTQAVIFCNTRRKVDWLTEQLTERDFTVSSMHGD--MDQSQRDTLMHEF 304
                 556789999***************8888888888876..7777777666666 PP

>> fragilysinNterm  N-terminal domain of fragilysin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       3.7   6.6e+03      83     105 ..     216     238 ..     210     242 .. 0.80
   2 ?   12.4   0.0   5.6e-05       0.1      77     106 ..     351     380 ..     349     389 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 3.7
  fragilysinNterm  83 elidyivykekermaeiaeyyaa 105
                      + i  +v k++  ++ i ++y a
       EPX73258.1 216 DPIRILVKKDELTLEGIKQFYVA 238
                      55777889999999999999976 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 5.6e-05
  fragilysinNterm  77 rlqrnGelidyivykekermaeiaeyyaah 106
                      r+ r G +i++++  + ++m ei ++y+++
       EPX73258.1 351 RFGRKGVSINFVTSEDVRMMREIEQFYNTQ 380
                      899************************976 PP

>> UvrD-helicase  UvrD/REP helicase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   6.8e-05      0.12       4      62 ..      45     104 ..      43     133 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 6.8e-05
                    HHHHHHHS..-SSEEEEEE-TTSSHHHHHHHHHHHHHHTSSSTGGGEEEEESSHHHHHHHH CS
  UvrD-helicase   4 eqreaias..lggpilveAsAGsGKTfvlaerilrlikeeeiepdrilvvTFTnkAaeElk 62 
                    +q++ai +   + ++l  A  G+GKT++    +l++i++   ++ + l++  T+  a+ ++
     EPX73258.1  45 IQQRAIMPilGERDVLAQAQSGTGKTATFSISVLQKIDTS-LKQCQALILAPTRELAQQIQ 104
                    678888885556678888888******************9.88888888877777666665 PP

>> Helicase_RecD  Helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   8.9e-05      0.16       3      51 ..      62     112 ..      60     174 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 8.9e-05
  Helicase_RecD   3 tAdRGRGKSaalGlalaaliaegk..snilvtapskenvktlfeflakgle 51 
                    +A+ G+GK+a+  + + + i ++   ++ l+ ap++e ++++ + + +  +
     EPX73258.1  62 QAQSGTGKTATFSISVLQKIDTSLkqCQALILAPTRELAQQIQKVVVALGD 112
                    6899***********999998876679**************9998855443 PP

>> Fanconi_A  Fanconi anaemia group A protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   0.00015      0.28      27      59 ..     251     282 ..     246     285 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00015
   Fanconi_A  27 dslkalevcaeiLecLekrkvsWlvLFqltekd 59 
                 d  + + v + ++ c  +rkv+Wl+  qlte d
  EPX73258.1 251 DLYETVTVTQAVIFCNTRRKVDWLT-EQLTERD 282
                 6778899*****************8.5899988 PP

>> Flavi_DEAD  Flavivirus DEAD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.3   0.00022       0.4      10      53 ..      62     107 ..      55     206 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00022
                 E--TTS-TTTTHHHHHHHHH..HHTT--EEEEESSHHHHHHHHHHT CS
  Flavi_DEAD  10 dlhPGaGktrkvlpelvkea..ierrlrtlvLaPtrvvlaemeeal 53 
                 ++  G+Gkt  +  +++++     ++ ++l+LaPtr  ++ +++ +
  EPX73258.1  62 QAQSGTGKTATFSISVLQKIdtSLKQCQALILAPTRELAQQIQKVV 107
                 56789*****999999887511457889********9999887754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (392 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       649  (0.0361983); expected 358.6 (0.02)
Passed bias filter:                      535  (0.0298399); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.45
# Mc/sec: 2610.48
//
Query:       EPX73259.1  [L=396]
Description: ethanol-hypersensitive mutant protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (396 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       898  (0.0500865); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2810.01
//
Query:       EPX73260.1  [L=1442]
Description: STE/STE11 protein kinase Win1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.8e-60  203.9   0.0    5.3e-60  203.0   0.0    1.5  1  Pkinase       Protein kinase domain
      5e-29  101.4   0.0    1.3e-20   73.8   0.0    2.3  2  Pkinase_Tyr   Protein tyrosine kinase
    0.00018   21.0   0.0       0.78    9.0   0.0    3.1  3  Kinase-like   Kinase-like
     0.0089   15.1   0.8       0.27   10.3   0.0    2.4  2  Seadorna_VP7  Seadornavirus VP7
  ------ inclusion threshold ------
      0.028   14.5   0.1       0.15   12.1   0.0    2.3  2  SRP1_TIP1     Seripauperin and TIP1 family
      0.073   13.0   0.0       0.15   12.0   0.0    1.5  1  APH           Phosphotransferase enzyme family
       0.16   11.9   0.1        0.6   10.1   0.0    2.0  2  PrgU          PrgU-like protein
        1.9    9.0   6.3        3.1    8.3   6.3    1.3  1  SOBP          Sine oculis-binding protein


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  203.0   0.0   2.4e-63   5.3e-60       2     264 .]    1124    1410 ..    1123    1410 .. 0.92

  Alignments for each domain:
  == domain 1  score: 203.0 bits;  conditional E-value: 2.4e-63
                  EEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH..HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS-- CS
     Pkinase    2 ekleklGeGsfGkVykaveketgkivAvKkikkekakkkke..kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgsls 96  
                  ++ e +G+GsfG+Vy+av+ +tg+ +AvK+i+ +k + ++   k+++ E+ il+ l+hpniv +y++  + +++ +++e+ +g +la++l+  ++ +
  EPX73260.1 1124 QQGEIIGRGSFGTVYRAVNLDTGDLMAVKTIALHKPRISRSliKRIRGEMIILELLDHPNIVCYYGIEVHREKINIFMELYQGSTLAEFLRYGRIED 1220
                  67899***************************99998888789***********************************************9877888 PP

                  HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.............................BCTTTSCGGGS CS
     Pkinase   97 eeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.............................ltsfvgtseYl 164 
                  e  ++ ++ q+legl+y+Hs gi HrD+KpeNiL+d++g++K tDFG ak    + +                              ++ +g++ Y+
  EPX73260.1 1221 ELVIQVYVLQLLEGLSYMHSCGISHRDVKPENILFDDNGVMKFTDFGSAKISVPTASklyeqltlqekeeyekefpedpttsnfhrNSTLTGSPMYM 1317
                  8899**********************************************99999889***************************999********* PP

                  -HHHH..TTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHT.HHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHH CS
     Pkinase  165 APEvl..keneyskkvDvWslGvilyelltgkppfsgekgkekvekeldq.lekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeel 258 
                  APE+l  ++++   ++D+WslG++++e+ tg pp+++          ld+ +  ++ i   +   +p+++++s+  +++lk++++ +p+kR ta++l
  EPX73260.1 1318 APELLlgTSTDEVGAMDIWSLGCVIVEMATGFPPWPK----------LDNrFSLMFYISALNPPIIPQDDQLSPMGQRFLKRCFATEPEKRATAADL 1404
                  *****7666666889*********************2..........2221334445555556789******************************* PP

                  HTSGGG CS
     Pkinase  259 lqhpyl 264 
                  l +p+l
  EPX73260.1 1405 LMDPWL 1410
                  *****7 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.8   0.0   5.6e-24   1.3e-20       3     151 ..    1125    1270 ..    1123    1288 .. 0.87
   2 !   25.1   0.0   4.1e-09   9.1e-06     161     256 ..    1306    1405 ..    1297    1407 .. 0.81

  Alignments for each domain:
  == domain 1  score: 73.8 bits;  conditional E-value: 5.6e-24
                   EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEE...STTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHT CS
  Pkinase_Tyr    3 lgkklGeGafGkVvegtlkgekekkevkVavKtl...keeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkk 95  
                    g+ +G+G+fG+V+++       ++    avKt+   k + +++  +++  e+ i++ l+hpniv ++g+ +++e++ i +e+ +g +L +fLr  
   EPX73260.1 1125 QGEIIGRGSFGTVYRAVNL----DTGDLMAVKTIalhKPRISRSLIKRIRGEMIILELLDHPNIVCYYGIEVHREKINIFMELYQGSTLAEFLRYG 1216
                   5789************999....7778899999854456667777889999*******************************************98 PP

                   CTTTSBHHHHHH.HHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHE CS
  Pkinase_Tyr   96 ekekltlkdlls.falqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLar 151 
                      +++ + +++ ++lq+ +G++y++s  + Hrd+   N+L ++n v+k +DfG a+
   EPX73260.1 1217 ---RIEDELVIQvYVLQLLEGLSYMHSCGISHRDVKPENILFDDNGVMKFTDFGSAK 1270
                   ...5555555542689**************************************776 PP

  == domain 2  score: 25.1 bits;  conditional E-value: 4.1e-09
                   ETTSSTSGGGGS-HHHHHHSEEEH..HHHHHHHHHHHHHHHTTSSGTTTTS.HHHHHHHHHHTTEE..S-BBTTSBHHHHHHHHHHT-SSGGGS-- CS
  Pkinase_Tyr  161 kkeeaklpvkWmapEslkekkfts..ksDvWsfGvllwEiftlgespypgl.kneevleklkegkr..lekpekcpeelyelmkkcweedpeeRpt 251 
                   ++++ + +  +mapE l  ++  +  + D+Ws G ++ E++t g  p+p+l +  +++ ++++ +   +++ ++ ++  ++++k+c++++pe+R+t
   EPX73260.1 1306 RNSTLTGSPMYMAPELLLGTSTDEvgAMDIWSLGCVIVEMAT-GFPPWPKLdNRFSLMFYISALNPpiIPQDDQLSPMGQRFLKRCFATEPEKRAT 1400
                   5555566778*******99886653378**************.********656677778865554338899999999*****************9 PP

                   HHHHH CS
  Pkinase_Tyr  252 fselv 256 
                    ++l+
   EPX73260.1 1401 AADLL 1405
                   98875 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.0    0.0017       3.7      15      69 ..    1124    1179 ..    1111    1184 .. 0.89
   2 !    9.0   0.0   0.00035      0.78     151     190 ..    1229    1268 ..    1205    1276 .. 0.87
   3 ?    0.6   0.0      0.12   2.8e+02     230     246 ..    1332    1348 ..    1325    1375 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0017
  Kinase-like   15 vrgellkkgdrsvvfevkdqetgeplavkvfllps.easkkdlerlkeqelairll 69  
                    +ge++++g ++ v+++ +  tg+ +avk   l + + s++ ++r++ + + ++ll
   EPX73260.1 1124 QQGEIIGRGSFGTVYRAVNLDTGDLMAVKTIALHKpRISRSLIKRIRGEMIILELL 1179
                   5799**************************999998***********999988877 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00035
  Kinase-like  151 lqlirlaanLqakglvhgkftvdnllldekgglmlggfta 190 
                   lql+    ++++ g+ h +++++n+l+d +g ++ ++f++
   EPX73260.1 1229 LQLLEGLSYMHSCGISHRDVKPENILFDDNGVMKFTDFGS 1268
                   7888888999***************************975 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.12
  Kinase-like  230 kldaWqlGlviyriwcl 246 
                   ++d W lG vi  ++  
   EPX73260.1 1332 AMDIWSLGCVIVEMATG 1348
                   69**********99875 PP

>> Seadorna_VP7  Seadornavirus VP7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.3     0.026        58     190     302 ..     643     767 ..     636     773 .. 0.68
   2 !   10.3   0.0   0.00012      0.27     149     207 ..    1230    1285 ..    1218    1294 .. 0.77

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.026
  Seadorna_VP7 190 Llertvvyvn.ieYesltqeae.vkvfvlsllelveklrkieleei..fikdlYldLdevasd....fnveagtrltdl.ldrlevts....dlvsa 273
                   Ll+r+v+     +Y++ t+  e    f+ s+   +++  ++ ++++  f+ d  ++++++++d    +n+++    t++ +++l+       +l+s 
    EPX73260.1 643 LLKRKVKNGCaLHYFKETEVLEdEWEFLSSICPFIQNGYQLMTKNLtrFVSDILVNINQYLNDqleePNLTSPSIITSFyMKTLDCVRirfrKLMSF 739
                   5556665443467777776544145799999999999999999999999999999876665432222899999888886245677666777788888 PP

  Seadorna_VP7 274 vamlpflallndleyynidDvlsllkedl 302
                      l +  + n  ey   +D ls+l + l
    EPX73260.1 740 ARTL-KSCMENSSEYIIREDALSVLVQRL 767
                   8774.334556666656677777776665 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00012
  Seadorna_VP7  149 aglkdLmdfhsestnllhGDcnpenlmcDknGylklvDPvsLlertvvyvnieYesltq 207 
                      l+ L  +h  s ++ h D++pen++ D nG++k+ D +s  +  v    + Ye+lt 
    EPX73260.1 1230 QLLEGLSYMH--SCGISHRDVKPENILFDDNGVMKFTDFGSA-KISVPTASKLYEQLTL 1285
                    4467788888..78999*********************9874.4456666677777775 PP

>> SRP1_TIP1  Seripauperin and TIP1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       6.4   1.4e+04      70      96 ..     415     440 ..     413     442 .. 0.83
   2 ?   12.1   0.0   6.8e-05      0.15      12      52 ..     685     725 ..     677     738 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 6.4
   SRP1_TIP1  70 aevssmitglPWYssRLepaiesalas 96 
                 ++v++++ +l  Y +RL p+ +++l++
  EPX73260.1 415 EAVDRLLNKLEKY-ERLYPSRRAILSD 440
                 6789999999999.99*9999998876 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 6.8e-05
   SRP1_TIP1  12 vaelevllnDvksnlkeYlslakansgfslPsgvlsvyaal 52 
                 +++l+ +++D+  n+++Yl+ + ++++ + Ps ++s y++ 
  EPX73260.1 685 TKNLTRFVSDILVNINQYLNDQLEEPNLTSPSIITSFYMKT 725
                 56899*********************************986 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   6.7e-05      0.15     167     202 ..    1242    1275 ..    1205    1276 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 6.7e-05
                  EEE-SS-SGGGEEEC..TTEEEEE---TT-EEEECC CS
         APH  167 vllHgDlhpgNllvdpddgrvtGviDfedaglgppl 202 
                  ++ H+D +p N+l+d  d+ v  + Df+ a+++ p+
  EPX73260.1 1242 GISHRDVKPENILFD--DNGVMKFTDFGSAKISVPT 1275
                  689************..56666899**999998775 PP

>> PrgU  PrgU-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.0       6.5   1.5e+04      22      58 ..     643     680 ..     642     685 .. 0.72
   2 ?   10.1   0.0   0.00027       0.6      54     104 ..     831     880 ..     808     882 .. 0.91

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 6.5
        PrgU  22 lvkvrlkntramemwynkqiteeniqeittl.niikng 58 
                 l+k ++kn  a+  + + ++ e++ + ++++   i+ng
  EPX73260.1 643 LLKRKVKNGCALHYFKETEVLEDEWEFLSSIcPFIQNG 680
                 67889999999999999888888776665541356666 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00027
        PrgU  54 iikngkslalevypeksiyvkpnlgrinvpvffiktpinrgvfeeifgetl 104
                 i   g+ + l+v pe si + pn  r+   v   +  + r +fee++g+t+
  EPX73260.1 831 IYWTGRVMNLDV-PEVSIAIAPNRVRLVTAVTGEQLSMAREIFEELVGDTV 880
                 556788888987.9***********************************97 PP

>> SOBP  Sine oculis-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   6.3    0.0014       3.1      75     265 ..       2     185 ..       1     221 [. 0.59

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0014
        SOBP  75 sncrsrsaspaskrsesvspepsksaspsssptssnsskplisvassskllaeksqepaslveaplepkkqrkkkpglrkpkqvkagsskssetkagll 173
                 +n+r+  a+ +++r +s +p p  s+ p++s + ++   +l+  ++ s ++ ++ ++ + + +++ ++  ++++++ + +++++  +  + set++gl 
  EPX73260.1   2 QNAREVRANAVNSRRKSLDPLPDGSHRPDDSFE-KSHRRSLTYLSEFSASIFSEAKRNSLSRRSSITQ--TQNEEAIKAQRHSRSGHRYSHSETRKGLS 97 
                 688888888888888999998888888888885.5555555555555555554444333333333332..22222222223333334455556666655 PP

        SOBP 174 qkq..qkalplsaeleessvpkpflrpppsiqelqsslpnqslpkiapppkppstlappsngaerppfsplleppksasenppgleepaprgft 265
                  ++  qk++     +++s ++  +  p+++  +lq++ +  ++        p   + p +  + +pp+ ++   p+++s +p +l+++ ++g +
  EPX73260.1  98 LTPneQKPNEADGYFSSSYLRDYPQYPEAH-SSLQKVSSADHVSMDEI--DPTVAISPGDTTIAGPPLLKT---PNHMSRPPLQLHHSFNKGLF 185
                 555115555555556666677777666665.55666666655553333..357778888888888888885...77777777778888777754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1442 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       587  (0.0327403); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.87u 0.27s 00:00:01.14 Elapsed: 00:00:00.44
# Mc/sec: 9737.28
//
Query:       EPX73261.1  [L=119]
Description: 60S ribosomal protein L30 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.2e-23   81.8   0.0    2.8e-23   81.5   0.0    1.1  1  Ribosomal_L7Ae  Ribosomal protein L7Ae/L30e/S12e/Gadd45 famil


Domain annotation for each model (and alignments):
>> Ribosomal_L7Ae  Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.5   0.0   1.6e-27   2.8e-23       2      94 ..      25     117 ..      24     118 .. 0.98

  Alignments for each domain:
  == domain 1  score: 81.5 bits;  conditional E-value: 1.6e-27
                     HHHHHHHHHHHHTEEEESHHHHHHHHHTTTESEEEEETTSSSGGHHHHHHHHHH..HTTEEEEEESCHHHHHHHTTSSSECSEEEEEESTTTHHH CS
  Ribosomal_L7Ae   2 aieevlkkakkagklvlGlkevtkalergeaklvilAedvepeekkkllealck..ekevpyvkvkskkeLGelvgkkrpvsalaikdegdskdl 94 
                     +i+++l + +k+gk+vlG+k ++kal++g+akl++lA +++  +k++ le++++  + +v+++++++  +LG+++g+ ++v +lai+d+gds++l
      EPX73261.1  25 TINSKLALTMKSGKYVLGYKSTLKALRSGKAKLILLAGNTPALRKSE-LEYYAMlsKCSVHHYNGSN-IDLGTAAGRLFRVGVLAIIDAGDSDIL 117
                     6899*******************************************.*******************.************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       359  (0.0200234); expected 358.6 (0.02)
Passed bias filter:                      307  (0.0171231); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 834.72
//
Query:       EPX73262.1  [L=128]
Description: alkyltransferase-like protein Atl1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.9e-25   88.2   0.0    3.6e-25   87.9   0.0    1.1  1  DNA_binding_1  6-O-methylguanine DNA methyltransferase, DNA b


Domain annotation for each model (and alignments):
>> DNA_binding_1  6-O-methylguanine DNA methyltransferase, DNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.9   0.0     2e-29   3.6e-25       1      81 []       5      87 ..       5      87 .. 0.98

  Alignments for each domain:
  == domain 1  score: 87.9 bits;  conditional E-value: 2e-29
                   HHHHHHHHHHTTS-TT-BEEHHHHHHHTT.TSCHHHHHHHHHTSSBTTTSGGGGEEBTTSBCCTT..TTCHHHHHHHHHHTTS CS
  DNA_binding_1  1 afqqrVwellrqIpyGkvttYgeiAkllgkpkaaraVgqalaanplailvPcHRVvgadgklggy..agglerkralLeaEgv 81
                   +f+ rV++++++IpyG+v tY++iAk +++p+ +r+Vgqal+ ++ +  vP+HRV++++g ++ +   +g +r+++ Le+Egv
     EPX73262.1  5 EFYTRVYDTVSEIPYGRVSTYSQIAKFIEAPTYSRHVGQALKFLHPESHVPWHRVINSRGCISRRdlPSGEQRQKDRLEEEGV 87
                   699*************************************************************98888************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       403  (0.0224776); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.28s 00:00:00.70 Elapsed: 00:00:00.47
# Mc/sec: 826.43
//
Query:       EPX73263.1  [L=127]
Description: tfiiic subunit sfc7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      2e-10   40.4   0.0    4.4e-10   39.3   0.0    1.5  1  TFIIIC_sub6  TFIIIC subunit triple barrel domain


Domain annotation for each model (and alignments):
>> TFIIIC_sub6  TFIIIC subunit triple barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.3   0.0   2.5e-14   4.4e-10      28      92 ..       2      63 ..       1      79 [. 0.80

  Alignments for each domain:
  == domain 1  score: 39.3 bits;  conditional E-value: 2.5e-14
                 -EEEEE-TTSSS-EEEETTEEEEEEEE--SSEEEEEE-S---.......--EEE-S-EEEEEEE- CS
  TFIIIC_sub6 28 kdlqilgLdtenPlisigdkvfeGeweeliGTelifeddddaalrkleeellaasskrikltevk 92
                 +dl i+gLdt +P+++ig+++f+G+w ++iGT+++ +  +d +   l+++ +  ++ r++l++++
   EPX73263.1  2 DDLVIMGLDTLHPIVRIGGMFFRGTWFHCIGTDIVVPVRNDVE---LSNKDMLLCQRRLVLEQIR 63
                 6899********************************9977763...3334444555555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       543  (0.0302861); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 882.09
//
Query:       EPX73264.1  [L=155]
Description: ubiquitin conjugating enzyme Ubc14 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.9e-44  149.7   0.0    4.4e-44  149.5   0.0    1.0  1  UQ_con     Ubiquitin-conjugating enzyme
    0.00042   20.0   0.0    0.00052   19.7   0.0    1.2  1  Prok-E2_B  Prokaryotic E2 family B


Domain annotation for each model (and alignments):
>> UQ_con  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.5   0.0   4.9e-48   4.4e-44       1     139 [.      11     148 ..      11     149 .. 0.98

  Alignments for each domain:
  == domain 1  score: 149.5 bits;  conditional E-value: 4.9e-48
                 HHHHHHHHHHHSTTTTEEEEEEETTEECEEEEEEEB.TTSTTTTEEEEEEEE--TTTTTS--EEEESST-SCTTBETTSBB-CGGGSTTT--TTSHHHH CS
      UQ_con   1 rlqkelkelakkkpsgisaklvddenlfewkvlikgpedtpYeggvFklelefpedYPlkpPkvkfvtkifHPnvdksGevcldiLkeekWspaltles 99 
                 r++ke+++l++++ ++++ +l +d nl++w++++ gp+d++Y+gg+F+++l f +dYP++pP+ +f+t+i+HPn d +G++cl iL+ + ++p+++l+s
  EPX73264.1  11 RINKEFADLQENPIPNLRCSLAND-NLYQWNCTVAGPRDSVYAGGTFHFTLAFRPDYPFQPPTAQFTTRIYHPNFDLEGNICLPILRPQAFKPSVKLRS 108
                 799********************7.************************************************************************** PP

                 HHHHHHHHHHS--TTS-SSHHHHHHHHHTHHHHHHHHHHH CS
      UQ_con 100 vllsiqsLlaepnpesplnkeaakllkkdreeykkkvkey 139
                 +l ++++Ll epnp++pl+ ++a+++++dr +++k +++y
  EPX73264.1 109 ILEQVIHLLVEPNPDDPLSPSIAEQYNNDRPAFEKIARDY 148
                 ************************************9987 PP

>> Prok-E2_B  Prokaryotic E2 family B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   5.8e-08   0.00052      31     111 ..      50     124 ..      19     140 .. 0.81

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 5.8e-08
   Prok-E2_B  31 vktsggtvdlrlvypdsfpllppavflqdpeqlkllpHintfg..gaLClleeeldldewdpngsvadvleqlqqvLn.egisg 111
                 v   ggt+ ++l + +++p+ pp    + +      +H n+ +  g +Cl    l++++++p   ++ +leq+ ++L   ++ +
  EPX73264.1  50 VY-AGGTFHFTLAFRPDYPFQPPTAQFTTR-----IYHPNF-DleGNICLP--ILRPQAFKPSVKLRSILEQVIHLLVePNPDD 124
                 44.79*****************87655554.....499999.446*****8..9***********************9666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       290  (0.0161749); expected 358.6 (0.02)
Passed bias filter:                      275  (0.0153383); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1159.37
//
Query:       EPX73265.1  [L=137]
Description: hypothetical protein SOCG_06264 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0068   15.2   6.7     0.0079   15.0   6.7    1.0  1  Presenilin       Presenilin
  ------ inclusion threshold ------
      0.016   15.5   7.7      0.017   15.4   7.7    1.1  1  PNISR            Arginine/serine-rich protein PNISR
      0.018   14.3   4.8      0.018   14.3   4.8    1.0  1  Zip              ZIP Zinc transporter
        0.2   10.4   3.2       0.23   10.2   3.2    1.1  1  Otopetrin        Otopetrin
       0.22   11.3  10.5       0.24   11.2  10.5    1.1  1  RR_TM4-6         Ryanodine Receptor TM 4-6
       0.36   10.9   7.4       0.49   10.5   7.4    1.2  1  Gti1_Pac2        Gti1/Pac2 family
       0.41    9.2  18.0       0.46    9.0  18.0    1.0  1  TFIIF_alpha      Transcription initiation factor IIF, alpha s
        1.1    9.3   5.9        1.2    9.1   5.9    1.1  1  Neur_chan_memb   Neurotransmitter-gated ion-channel transmemb
        1.4    9.0   2.9        1.8    8.7   2.9    1.2  1  Podoplanin       Podoplanin
        1.4    7.6   6.3        1.7    7.3   6.3    1.1  1  ALMT             Aluminium activated malate transporter
        4.8    5.9  13.8        5.4    5.7  13.8    1.0  1  NPR3             Nitrogen Permease regulator of amino acid tr
          7    6.1   8.9        8.7    5.8   8.9    1.2  1  Sec62            Translocation protein Sec62
        8.1    6.2  11.1        9.3    6.0  11.1    1.1  1  Selenoprotein_S  Selenoprotein S (SelS)


Domain annotation for each model (and alignments):
>> Presenilin  Presenilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   6.7   5.7e-06    0.0079     246     335 ..      40     130 ..      13     133 .. 0.38

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 5.7e-06
  Presenilin 246 eeasesskeeeseeesseksaqsseseeeseeesseaessaee.sseekeseessesseeeeeeeeeeeeseseergvkLGLGDFiFYSvL 335
                 +++ +++k  e+e+++++ ++ +s+s++e+e++s +++ ++e+  +e+++s+ s++++++++e++ ee++++s  +g+   L  FiF S+ 
  EPX73265.1  40 KNEMNKKKPIENEDNTEKPIEDKSSSKNEKENKSDPKSLDQEAtCAENSSSTDSNDHQDHKKEKSCEEKQEKSFLTGINRNLATFIFSSLF 130
                 1111111111111112222222222222222222222222222022222222222222222222222222222235999999999999975 PP

>> PNISR  Arginine/serine-rich protein PNISR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   7.7   1.3e-05     0.017      71     142 ..      41     112 ..       7     134 .. 0.63

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.3e-05
       PNISR  71 deksdeeeeeg....aegedsesqekasskksevdeqespeeeeaarkei.eesspaeeeeeeepeakteeekqael 142
                 +e  ++    +    +e++ ++  e++ss k+e ++++ p++ ++++  + ++ss + ++++ ++++k+ eekq++ 
  EPX73265.1  41 NE-MNK----KkpieNEDNTEKPIEDKSSSKNEKENKSDPKSLDQEATCAeNSSSTDSNDHQDHKKEKSCEEKQEKS 112
                 11.111....1333333333333444444555567777887777777777788899999999999999999998873 PP

>> Zip  ZIP Zinc transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   4.8   1.3e-05     0.018     103     189 ..      42     126 ..      16     137 .] 0.69

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.3e-05
         Zip 103 ksshkektpkkasssssesaakksvsndkveeseekedhvaeadtdadskeelrngkqeksesekeqaseeedkeklaslkvraiil 189
                 + ++k++++++ +++++ +++++s ++++ +++ ++ d+  ea   ++s+++++n++q++++++++++++e++     +++++++i+
  EPX73265.1  42 EMNKKKPIENEDNTEKPIEDKSSSKNEKENKSDPKSLDQ--EATCAENSSSTDSNDHQDHKKEKSCEEKQEKSFLTGINRNLATFIF 126
                 455667777777777777777777777777777776664..5555666678899999999999999887666666666666666655 PP

>> Otopetrin  Otopetrin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   3.2   0.00017      0.23     102     186 ..      51     135 ..      29     137 .] 0.54

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00017
   Otopetrin 102 lekeesaeeassssssaridalrkakkvltkstakekiisarleqrtastesqslieC...ertnimgtlvqdaapylyPfiiEYsli 186
                 +e++++++++ +sss+++++++++    ++  ++++   +++ +++++++++++  +C   ++++++  ++ ++a +++  +   s+i
  EPX73265.1  51 NEDNTEKPIEDKSSSKNEKENKSDP---KSLDQEATCAENSSSTDSNDHQDHKKEKSCeekQEKSFLTGINRNLATFIFSSLFMLSVI 135
                 1222233333333333333333222...234444455555556666666777777788444566677778999999999887777766 PP

>> RR_TM4-6  Ryanodine Receptor TM 4-6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2  10.5   0.00017      0.24      88     168 ..      39     118 ..       8     131 .. 0.56

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00017
                 XXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXX............XXXXXXXXXXXXXXXXXXXXXXXXX-HHHHH CS
    RR_TM4-6  88 kklaeeeeaeeekeeeeepeaeaeekadaengekeekeke..keeeekeseeeeeekkkkkkakskkkeeaeaeesellkkle 168
                 +k + ++++  e+e+++e+  e+   ++++++eke+k+     ++e++++e+++ + +  ++ ++k+k  +e++e ++l+ ++
  EPX73265.1  39 QKNEMNKKKPIENEDNTEKPIED---KSSSKNEKENKSDPksLDQEATCAENSSSTDSNDHQDHKKEKSCEEKQEKSFLTGIN 118
                 33333334444444444444444...444444444444331134444555555555555555555555556666666766554 PP

>> Gti1_Pac2  Gti1/Pac2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   7.4   0.00035      0.49      67     145 ..      12     113 ..      10     129 .. 0.38

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00035
                 -EEETTEEEEEB-...................------------------------------.............................---.---- CS
   Gti1_Pac2  67 SrilgnfLvYrel...................dkkrakkkkkkkkkkskestkkeesksekasssssess............eakesssssesk.asks 133
                 Sr  +++L Y +                    +kk++ +++++++k  + +++++++k++         +            ++++ss+ s+++  +k+
  EPX73265.1  12 SRSPEEWLKYANArfneynvlqpwedaqknemNKKKPIENEDNTEKPIEDKSSSKNEKEN---------KsdpksldqeatcAENSSSTDSNDHqDHKK 101
                 566666666666666666666655433222112222222222222211111111111111.........112222333333322233333322324444 PP

                 ------------ CS
   Gti1_Pac2 134 skslekdsersl 145
                 +ks e+++e+s+
  EPX73265.1 102 EKSCEEKQEKSF 113
                 444444455444 PP

>> TFIIF_alpha  Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0  18.0   0.00034      0.46     300     373 ..      36     106 ..      13     118 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00034
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXX CS
  TFIIF_alpha 300 edkkseEeeekkeieqdedeeekeeekkeeegklskkkkkakklkkkkkekdkkdSddeedsddsDideedsvs 373
                  ed++++E ++kk ie+++++e+  e+k  + +k +k++k ++k +++++   +++S + +++d++D  +e+s  
   EPX73265.1  36 EDAQKNEMNKKKPIENEDNTEKPIEDK--SSSKNEKENKSDPKSLDQEATCAENSS-STDSNDHQDHKKEKSCE 106
                  778899999999998866666655555..455788999999999999999966555.99999999999999854 PP

>> Neur_chan_memb  Neurotransmitter-gated ion-channel transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   5.9    0.0009       1.2     105     187 ..      28     110 ..       3     127 .. 0.50

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.0009
                     HHC--------------...--------------------------------------SS---TTGGG--.....-----TTTTT CS
  Neur_chan_memb 105 rllfmkrpsevkdnekkl..ssgasseaeelilskskseskkaklseeqgsekastckckckegeeaspstqlskeelspelkka 187
                     ++  ++  +++++ne ++  +  ++ ++e+ i  ks+s+ +k+++s+ ++ ++++tc+ +++++  + +++  +k+e+s+e k+ 
      EPX73265.1  28 EYNVLQPWEDAQKNEMNKkkPIENEDNTEKPIEDKSSSKNEKENKSDPKSLDQEATCAENSSSTDSNDHQD--HKKEKSCEEKQE 110
                     44444333333333322211444455555555555555555556666666666666665554444443333..334444444443 PP

>> Podoplanin  Podoplanin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   2.9    0.0013       1.8      59     122 ..      38     106 ..      25     122 .. 0.60

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0013
                 XXXXXXXXXXXXXXXX-----GGG-XXXXXXXXXXXXXXX.....XXXXXXXXXXXXXXXXXXXXXXXX CS
  Podoplanin  59 pyesglttlvptstesvtdlrledlptaestvkakeesqs.....tttlnvvtshstekvgeetettve 122
                  +++++    p++ e  t++ +ed++ +++  ++k + +s     t + n  +  s ++ + ++e++ e
  EPX73265.1  38 AQKNEMNKKKPIENEDNTEKPIEDKSSSKNEKENKSDPKSldqeaTCAENSSSTDSNDHQDHKKEKSCE 106
                 444555556688888888888888888777665555433311111334444444455555555555544 PP

>> ALMT  Aluminium activated malate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   6.3    0.0013       1.7     364     442 ..      39     117 ..      21     133 .. 0.55

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0013
        ALMT 364 ekaeeveekkeeekeseskkeeaeaveeaeseseksllkeskrslklskkesapaeesleekqlskeeelkelelaeal 442
                 +k+e +++k  e++++++k  e+++++++e+e++++ ++  ++++  ++++s++++ ++ +k++++ ee++e+++++ +
  EPX73265.1  39 QKNEMNKKKPIENEDNTEKPIEDKSSSKNEKENKSDPKSLDQEATCAENSSSTDSNDHQDHKKEKSCEEKQEKSFLTGI 117
                 3333333333334444444444455555555555555555566666666666666665555555556666666655544 PP

>> NPR3  Nitrogen Permease regulator of amino acid transport activity 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7  13.8    0.0039       5.4      45     126 ..      36     111 ..      11     122 .. 0.42

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0039
        NPR3  45 rkskkkkkkskrkrssrskekkskesskksesssksesseekksskeseeseek.esneeeeeeededdeesekeeeekedkk 126
                 ++       +k++ ++++  +++++++k  e++s+s++++e+ks+++s ++e++  +n+++++++d++d++ +++++e++++k
  EPX73265.1  36 EDA------QKNEMNKKKPIENEDNTEKPIEDKSSSKNEKENKSDPKSLDQEATcAENSSSTDSNDHQDHK-KEKSCEEKQEK 111
                 333......22222222222222222233333333333333333333333333303333333444444433.33444444444 PP

>> Sec62  Translocation protein Sec62
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   8.9    0.0063       8.7      14      78 ..      45     109 ..      22     126 .. 0.43

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0063
       Sec62  14 alksekekkkskkkkeklkevkkkekaekvfkelkksqlalrveklkekekkkkkeekkkkkkkk 78 
                 ++k  +++ +++k  e++++ k+++++++  k+l ++ + ++ +++++++++++++++k+ ++k+
  EPX73265.1  45 KKKPIENEDNTEKPIEDKSSSKNEKENKSDPKSLDQEATCAENSSSTDSNDHQDHKKEKSCEEKQ 109
                 22222222222222222222222233333333333333333333332222222222222222222 PP

>> Selenoprotein_S  Selenoprotein S (SelS)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0  11.1    0.0068       9.3      92     162 ..      32     101 ..       7     116 .. 0.78

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0068
  Selenoprotein_S  92 mqeeldakaekfkekkkqleeekRrqkiemWesmkeGksykgkaklaqeeteetglsassakkkkksdkkp 162
                      +q   da+ ++ ++kk   +e+   + ie+  s k+ k  k++ k  ++e    +  +ss+ + + +d+k 
       EPX73265.1  32 LQPWEDAQKNEMNKKKPIENEDNTEKPIEDKSSSKNEKENKSDPKSLDQEATC-AENSSSTDSNDHQDHKK 101
                      566679999999999988999999999****************9999888554.44445555555555443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2050  (0.11434); expected 358.6 (0.02)
Passed bias filter:                      542  (0.0302304); expected 358.6 (0.02)
Passed Vit filter:                       118  (0.00658152); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 975.50
//
Query:       EPX73266.1  [L=1207]
Description: ATP-dependent DNA helicase Snf21 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      3e-70  236.7   0.9    8.6e-70  235.2   0.9    1.7  1  SNF2_N       SNF2 family N-terminal domain
    8.2e-20   70.9  13.2    8.2e-20   70.9  13.2    3.2  3  HSA          HSA
    6.3e-19   67.8   1.0    2.8e-18   65.8   1.0    2.2  1  Bromodomain  Bromodomain
    2.3e-18   66.6   0.4    5.2e-17   62.2   0.0    3.3  3  Helicase_C   Helicase conserved C-terminal domain
    1.4e-09   38.2   0.0    1.4e-09   38.2   0.0    3.0  3  ResIII       Type III restriction enzyme, res subunit
    1.7e-07   31.8   3.4    1.7e-07   31.8   3.4    3.0  2  SnAC         Snf2-ATP coupling, chromatin remodelling complex
    1.2e-05   25.0   0.3    0.00027   20.7   0.0    2.8  2  SWI2_SNF2    SWI2/SNF2 ATPase


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  235.2   0.9   3.3e-73   8.6e-70      49     349 ..     436     720 ..     426     721 .. 0.85

  Alignments for each domain:
  == domain 1  score: 235.2 bits;  conditional E-value: 3.3e-73
                 HHHHHTT--EEE---TTS--HHHHHHHHH...HHTTTS---.......S-EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH------------. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx. RF
      SNF2_N  49 aeakqsvrGGiLaDemGLGKTvqvlalilaqrakeekdkekkrkdtlagptLivvPaslldqWeneierhvsssalrvlvyggqkkmkkkntkvapkl. 146
                 +++++++ +GiLaDemGLGKT+q+++l++++           +k++  gp+Li+vP s+l++W  e+er+++s +   +vy+g       ++ ++p++ 
  EPX73266.1 436 ISLYNNHLNGILADEMGLGKTIQTISLVTHLI----------EKKRQNGPFLIIVPLSTLTNWAMEFERWAPSISK--IVYKGPP---LVRKALQPQVr 519
                 5788999**********************333..........3455679************************976..5555542...33344555541 PP

                 -----EEEE-HHHHHHHT......TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH.---S-EEEE-S--SSS-HHHHHHHHHHH-TTTT--HHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 147 ladydvvittYdvlsreaelqkkrsvlkqvewkrvvlDEghtlknstskaaeavsk.LstsnrwiltGTPiqnsledlygLlkfLreepfgekqtfdkl 244
                 + +++v++tt++++ ++         l++++w ++++DEgh+lkn++sk++ ++ + +s++ r+iltGTP+qn+l +l++Ll+f+ +++f++ ++fd++
  EPX73266.1 520 HGNFQVLLTTFEYIIKDR------PILSRIKWVYMIMDEGHRLKNTQSKLTSTLMTyYSSRFRLILTGTPLQNNLPELWALLNFVLPKIFKSVKSFDEW 612
                 6799***********777......9**************************99999788999************************************* PP

                 THHHHH............HHHHHHHHHHHTT-STTEE---GGGT--S---EEEEEEEEE--HHHHHHHH....................HHHHHH-HHH CS
                 xxxxxx............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 245 lqrpie............aqaekgrsrLlqllqrlmlrrakkdveknlPpkteeiiflklskverksYnrllevlrkkalakllkrseaalkssskske 331
                 +++p++            +++   ++rL+++l++++lrr kkdve +lP+k+e++i++++s  ++k+Y+    ++ k+ ++++  +++    ++    +
  EPX73266.1 613 FNTPFAntgnqdkielteEESLLVIRRLHKVLRPFLLRRLKKDVESELPDKVEKVIRCQMSGLQQKLYH----QMKKHGILFVEDENK--GRAGI---K 702
                 **************99877778889********************************************....233333333333322..22222...2 PP

                 -HHHHHHHHHHHHH---X CS
                 xxxxxxxxxxxxxxxxxx RF
      SNF2_N 332 kilelllelrqacnhpql 349
                  + +++++l+++cnhp++
  EPX73266.1 703 GLQNTVMQLKKICNHPYV 720
                 277889*********986 PP

>> HSA  HSA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.9  13.2   3.2e-23   8.2e-20       2      71 .]     266     335 ..     265     335 .. 0.98
   2 ?   -2.8   0.0       3.2   8.1e+03      16      43 ..     540     567 ..     539     571 .. 0.78
   3 ?    0.7   0.2      0.27     7e+02      12      46 ..     676     710 ..     675     713 .. 0.88

  Alignments for each domain:
  == domain 1  score: 70.9 bits;  conditional E-value: 3.2e-23
                 XXXXXXXX--HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH--XXXXXXXXXXXXXXXXXXX.. CS
         HSA   2 qeperrqkthhdylLeeilwhakdfkeerkskrakakklaravakyhnniekeeqkriereekerlkalk 71 
                  ++err k+++ ++L+ i+ h+++++   k+ +a+a+k +rav++yh++iekeeq+r er++k+rl+al+
  EPX73266.1 266 SDRERRLKQRQYDYLQNICSHGRELAARTKNAQARAQKSNRAVLAYHSHIEKEEQRRAERNAKQRLQALR 335
                 68******************************************************************95 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 3.2
                 HHHTTHHHHHHHHHHHHHHHHHHHHHHH CS
         HSA  16 Leeilwhakdfkeerkskrakakklara 43 
                 L  i+w +  + e ++ k ++ k  +  
  EPX73266.1 540 LSRIKWVYMIMDEGHRLKNTQSKLTSTL 567
                 6779999999999999998877766555 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.27
                 HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         HSA  12 hdylLeeilwhakdfkeerkskrakakklaravak 46 
                 +++l  +++ h+  f e+ +  ra +k l   v++
  EPX73266.1 676 QQKLYHQMKKHGILFVEDENKGRAGIKGLQNTVMQ 710
                 567789***************99999999999987 PP

>> Bromodomain  Bromodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.8   1.0   1.1e-21   2.8e-18      11      83 ..    1094    1166 ..    1082    1167 .. 0.94

  Alignments for each domain:
  == domain 1  score: 65.8 bits;  conditional E-value: 1.1e-21
                   TTCGGGGCSTT-GCCSTTHHHH.SS---HHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHSHTTSHHHHHHH CS
  Bromodomain   11 hklaepFlepvdpeefpdyyavikkPldLstIkkklesnkYksladfeadlkllfsNarkyngegsviyelae 83  
                   ++++++Fle ++++ +pdyy +ik P+ L  I+k ++   Yksl+++  d+  +f+Nar+yn+egs +ye+a+
   EPX73266.1 1094 RQINAMFLEVPSKKLYPDYYLIIKAPIALDIIRKHINGTYYKSLDAMISDFMTMFNNARTYNEEGSFVYEDAN 1166
                   569********************************************************************97 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       1.1   2.8e+03      22      70 ..     235     280 ..     225     290 .. 0.78
   2 ?   -0.9   0.1      0.79     2e+03      37      64 ..     302     329 ..     284     334 .. 0.77
   3 !   62.2   0.0     2e-20   5.2e-17       2     111 .]     744     857 ..     743     857 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 1.1
                 EESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEE CS
  Helicase_C  22 fvntidrlekvklllekkgikvavlhgelpqnereeileqfnkgesdvL 70 
                  +nt dr+  +kl   k + ++++l+  l+ ++r +  ++ ++ ++d+L
  EPX73266.1 235 LLNTADRVA-CKLP--KPAPQATRLTEALERQQRSDRERRLKQRQYDYL 280
                 556666663.3333..5567899999999999**999999999999998 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.79
                 HHTTSTEEEESTTSTHHHHHHHHHHHHT CS
  Helicase_C  37 ekkgikvavlhgelpqnereeileqfnk 64 
                 +k++  v+++h+ ++++e++++ ++ ++
  EPX73266.1 302 QKSNRAVLAYHSHIEKEEQRRAERNAKQ 329
                 455789999**********999888765 PP

  == domain 3  score: 62.2 bits;  conditional E-value: 2e-20
                 HHHHHHHHH.HHTTTTSEEEEEESSHHHHHH.HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH..TTSSS.EEEESGGGTSSSTSTTESEEEESSSSS CS
  Helicase_C   2 kleallell.kleeeggkilifvntidrlek.vklllekkgikvavlhgelpqnereeileqfn..kgesd.vLiatdvaerGidipkvnlVinfdlpr 95 
                 k+e l + l kl + g+++l+f + ++ ++   ++l + +++++++l+g++++++r + l  fn    +++ +L++t++++ G++++++++V++fd ++
  EPX73266.1 744 KFELLDRVLpKLFRAGHRVLMFFQMTQIMNImEDYL-HYRHFRYLRLDGSTKADDRSKLLGVFNdpTADIQiFLLSTRAGGLGLNLQSADTVVIFDSDW 841
                 56667777788899*************775535666.6668***********************775667779************************** PP

                 SHHHHHHHHTTSSSTT CS
  Helicase_C  96 nvtsyiqriGRtgRag 111
                 n+++  q+ +R++R+g
  EPX73266.1 842 NPHQDLQAQDRAHRIG 857
                 **************97 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.2       2.2   5.5e+03      15      28 ..      46      59 ..      12     118 .. 0.52
   2 ?   -1.8   1.3       1.1   2.7e+03      77     122 ..     275     329 ..     257     354 .. 0.60
   3 !   38.2   0.0   5.6e-13   1.4e-09       3     169 ..     423     583 ..     421     585 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 2.2
                HT......TTSEEE CS
      ResIII 15 lleklkskrdkrgl 28
                + +k++ kr+++gl
  EPX73266.1 46 VQKKIQTKRKTKGL 59
                22222222222222 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 1.1
                 GTGG...........GEEEESSS-B--.......-SEEEEEHHHHHHTH.......... CS
      ResIII  77 flseayke.......igkkvsgdkkkakekdstnkkilvttiqsldadseee......e 122
                  +     +       +g ++  ++k+a+++++++++ +++  + + ++++++      +
  EPX73266.1 275 RQY----DylqnicsHGRELAARTKNAQARAQKSNRAVLAYHSHIEKEEQRRaernakQ 329
                 333....3333466667778888888877888888888888888888885556654321 PP

  == domain 3  score: 38.2 bits;  conditional E-value: 5.6e-13
                 EE-HHHHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S......-EEEEESSHHHHHHHHHHGGGGTGG......GEEEESSS-B--.. CS
      ResIII   3 elreyQeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkee.kflflvprkslleqtleefkkflseayke..igkkvsgdkkkake 98 
                 +l+eyQ++ ++ +++ +  +++ +g+++ + G GKT+  ++l+ +l +k++++  fl++vp  +l++ +  ef++++++  k   +g  +  +  +  +
  EPX73266.1 423 KLKEYQIRGLQWMISLY--NNHLNGILADEMGLGKTIQTISLVTHLIEKKRQNgPFLIIVPLSTLTN-WAMEFERWAPSISKIvyKGPPLVRKALQ-PQ 517
                 68899999999999666..7999***********************999888789******999876.6667888888765443322223233333.35 PP

                 .....-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS..TTTHH.HHHT---SEEEEEESS- CS
      ResIII  99 kdstnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgak.kswre.ilekfkeavllglTATp 169
                  +  n ++l+tt + + +d+         l+r +  ++i+DE Hrl+   ++ ++ ++ ++++ ++l lT+Tp
  EPX73266.1 518 VRHGNFQVLLTTFEYIIKDR-------PILSRIKWVYMIMDEGHRLKNTqSKLTStLMTYYSSRFRLILTGTP 583
                 7778****************.......567777788**********997435555479**************9 PP

>> SnAC  Snf2-ATP coupling, chromatin remodelling complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.8   1.4         7   1.8e+04      50      67 ..     260     277 ..     254     278 .. 0.58
   2 !   31.8   3.4   6.5e-11   1.7e-07       5      77 .]     952    1020 ..     939    1020 .. 0.73

  Alignments for each domain:
  == domain 1  score: -4.8 bits;  conditional E-value: 7
                 HHHHHHH-XXXXXXXXXX CS
        SnAC  50 ldeqlygrgkRaRkevsY 67 
                 l+ q+    +R+ k+++Y
  EPX73266.1 260 LERQQRSDRERRLKQRQY 277
                 455555555666666666 PP

  == domain 2  score: 31.8 bits;  conditional E-value: 6.5e-11
                  S----..........----SS-------------------HHHHHHHHHHHH-XXXXXXXXXXXXXXXXXXXX CS
        SnAC    5 eeakkqsgedgserkplpsRLleeseLPefyekdgveekkeekeeldeqlygrgkRaRkevsYeDqlTEeefl 77  
                  ++++ ++++++s++k+ ++RL++ +eLPefy+++ +  k e +   + +  grg+R+R  v Y++   + ++l
  EPX73266.1  952 TQED-DENSPYSKSKG-KERLIQVEELPEFYQQE-QPVKVE-EAPQNLEDLGRGARRRIPVVYDEAARDAQWL 1020
                  2222.46677777765.****************6.333333.233445568*********************7 PP

>> SWI2_SNF2  SWI2/SNF2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.6       0.2   5.2e+02      58     136 ..      31     112 ..      16     129 .. 0.61
   2 !   20.7   0.0   1.1e-07   0.00027       4     160 ..     430     586 ..     426     597 .. 0.76

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.2
   SWI2_SNF2  58 RkdLd.kQlsktfakageekpkqaesrkeLkell...eke.sekiifttiqKfeeeekeklevlsereniivlvDEaHRsqyge 136
                 R+++   Q+ +++++++++ +++ +++  Lk+     ++e ++ki+  +++ +++  + +l++   +e + vl+DE  ++++++
  EPX73266.1  31 RNNIAyAQICDELRNVQKKIQTKRKTKGLLKQYAcstNEEvEKKILKEMVKSYRQL-SLNLPAA-GNEVFRVLMDEERKTKQED 112
                 66654259999999998888655555555555544322334556666666666432.2233433.3334669999988886653 PP

  == domain 2  score: 20.7 bits;  conditional E-value: 1.1e-07
   SWI2_SNF2   4 ravekavervkegdrkgGviWHtqGSGKsltmvflakklleeelknpkvvvvtDRkdLdkQlsktfakageekpk.....qaesrkeLkellekeseki 97 
                 r+ + +++  ++  + +G++    G GK+++ + l++ l+e++ +n  +++++  + L +  + +f++   + +k         rk L+ ++++ + ++
  EPX73266.1 430 RGLQWMISLYNN--HLNGILADEMGLGKTIQTISLVTHLIEKKRQNGPFLIIVPLSTLTNWAM-EFERWAPSISKivykgPPLVRKALQPQVRHGNFQV 525
                 555555554444..5789999999*****************9999999999*99999988655.56665333222000113445677888887778888 PP

   SWI2_SNF2  98 ifttiqKfeeeekeklevlsereniivlvDEaHRsqyg..elakklrkalpnaafigFTGTPilk 160
                 ++tt + + ++     + ls+ + +++++DE+HR +    +l ++l++      ++ +TGTP+++
  EPX73266.1 526 LLTTFEYIIKD----RPILSRIKWVYMIMDEGHRLKNTqsKLTSTLMTYYSSRFRLILTGTPLQN 586
                 88888877542....489****************87654489999******************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1207 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1498  (0.0835518); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.89u 0.29s 00:00:01.18 Elapsed: 00:00:00.45
# Mc/sec: 7993.45
//
Query:       EPX73267.1  [L=544]
Description: elongator complex [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.2e-33  113.6   0.0    6.9e-33  112.5   0.0    1.6  1  Radical_SAM_C    Radical_SAM C-terminal domain
      3e-20   73.2   0.1      8e-20   71.9   0.1    1.7  1  Radical_SAM      Radical SAM superfamily
    6.4e-10   39.3   0.1    1.4e-09   38.2   0.1    1.6  1  Acetyltransf_1   Acetyltransferase (GNAT) family
    6.1e-07   29.4   0.1    1.5e-06   28.2   0.1    1.6  1  Acetyltransf_10  Acetyltransferase (GNAT) domain
      0.007   16.8   0.2      0.015   15.7   0.2    1.6  1  Acetyltransf_7   Acetyltransferase (GNAT) domain
  ------ inclusion threshold ------
       0.12   12.6   0.0        1.3    9.3   0.0    2.4  2  Catalase-rel     Catalase-related immune-responsive


Domain annotation for each model (and alignments):
>> Radical_SAM_C  Radical_SAM C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.5   0.0   2.3e-36   6.9e-33       2      81 ..     310     389 ..     309     390 .. 0.98

  Alignments for each domain:
  == domain 1  score: 112.5 bits;  conditional E-value: 2.3e-36
  Radical_SAM_C   2 dgvKlypllvikgTeLaelyksgeykplsleeyvdlvadilellppdirvhRltgdipkelliagpwhknlreliekrlk 81 
                    dg+Klyp+lvi+gT+L+el+k g+yk ++++ +vdl+a+il+l+pp++r++R+++dip++l+++g++++nlrel+++r+k
     EPX73267.1 310 DGLKLYPTLVIRGTGLYELWKTGRYKNYTPNALVDLIARILALVPPWTRIYRIQRDIPMPLVSSGVETGNLRELALNRMK 389
                    9******************************************************************************7 PP

>> Radical_SAM  Radical SAM superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.9   0.1   2.7e-23     8e-20      10     158 ..      99     292 ..      93     298 .. 0.84

  Alignments for each domain:
  == domain 1  score: 71.9 bits;  conditional E-value: 2.7e-23
                  -......-TTTSCCTT...................HHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEESSTGGGSTTHHHHHHHHHHTC........ CS
                  x......xxxxxxxxx...................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........ RF
  Radical_SAM  10 r......CsfCarpet...................vrregrgrslsveeileevkelkaekgvkevilgggepllypdfvellerlakla........ 74 
                         C++C+ + +                     r ++  + + +  +e++++l ++ ++ e i++gg+ +  p+ ++  + +            
   EPX73267.1  99 IamtgnvCVYCPGGPDsdfeystqsytgyeptsmrAIRARYDPYEQARGRVEQLRSLGHNVDKVEYIIMGGTFMSLPESYRHHFIANLHNalsgaste 196
                  4455556*************************766555555556666666666677769999777777777777777777777777777777777888 PP

                  ..........CCTEEEEEEECSSCHG...HHHHHHHHHTT-SEEEEEEBSSSHHHHHHHHTCTSHHHHHHHHHHHHHHTTSETEEEEEEEBTTTSHH CS
                  ..........xxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Radical_SAM  75 ..........vpgiritvetngtlpd...eeklerllelgvdrvslgleaaddekvlklmnrghtfeevlealeklreagikrvvdrivglpGende 158
                             ++ +++ +t +t+pd   + +l+++l++g++r+++g++++ ++ v + +nrght+++v e+++ ++++g k+v+++++ lp++ +e
   EPX73267.1 197 dvdeavrfseQSETKCVGITIETRPDyclDQHLDEMLRYGCTRLEVGVQSVYED-VARDTNRGHTVKAVCETFQQAKDVGYKVVTHMMPDLPNVGME 292
                  88888888888*******************************************.**********************************99999887 PP

>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.2   0.1   4.7e-13   1.4e-09       2     117 .]     396     533 ..     395     533 .. 0.81

  Alignments for each domain:
  == domain 1  score: 38.2 bits;  conditional E-value: 4.7e-13
                     HHHHHHHHHHTHHHHHHHHHHH...HHHHHHSTTCEEEE...EEETTE...EEEEEEEEEEET.......TSTTEEEEEEEEE..........SG CS
  Acetyltransf_1   2 rdlvellvesffppnedaseee...feesfsleaegllv...aeedge...liGfisllkipd.......ekggvayieslaV..........sp 70 
                     rd++  +v  ++ +++  +e +   ++++   +a+g++     +ed++   liG ++l+k  +       + +++  +++l+V          +p
      EPX73267.1 396 RDIRAREVGMQEVHHKIHPEQVellRRDY---TANGGWEtflSYEDPKqdiLIGLLRLRKCSEatyrpelQPQQTSLVRELHVygsavplhsrDP 487
                     56666777777766666666666678888...8887777663555544567*******************778999999999999999*****66 PP

                     GG.TTSSHHHHHHHHHHHHHHHT.TESEE.EEEEETTEHHHHHHHHHTTE CS
  Acetyltransf_1  71 ey.rgkGlGsaLlealeeraree.gikki.vlaveedndaairlYeklGF 117
                     +  +++G G++Lle++e++aree g +k+ v+    + ++ +++Y+klG+
      EPX73267.1 488 KKfQHQGFGTLLLEEAERIAREEhGSEKLsVI----SGVGVRKYYRKLGY 533
                     655********************888998455....999******88**8 PP

>> Acetyltransf_10  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.2   0.1   4.9e-10   1.5e-06      61     111 ..     488     538 ..     487     542 .. 0.93

  Alignments for each domain:
  == domain 1  score: 28.2 bits;  conditional E-value: 4.9e-10
  Acetyltransf_10  61 peyrgqGigkaLleaveeeaekdgikleltvnaspyavpfYeklGFkavge 111
                      +++++qG g+ Lle++e+ a++++++++l+v +    +++Y+klG++  g+
       EPX73267.1 488 KKFQHQGFGTLLLEEAERIAREEHGSEKLSVISGVGVRKYYRKLGYESDGP 538
                      789****************99888888*******************98875 PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.2   5.1e-06     0.015      34      75 ..     488     534 ..     486     535 .. 0.62

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 5.1e-06
                     GGGTTSSHHHHHHHH.....TT.SEEEEEEEEETHH.....HHHHHHHHTTEE CS
  Acetyltransf_7  34 peyrgkGiGraLlea.....ae.kgiileqlelnae.....kaikfYeklGFe 75 
                     ++++ +G G+ Lle      +e +g      +l  +       +k+Y+klG+e
      EPX73267.1 488 KKFQHQGFGTLLLEEaeriaREeHG----SEKL--SvisgvGVRKYYRKLGYE 534
                     589**********953443311344....2223..1122335578*******8 PP

>> Catalase-rel  Catalase-related immune-responsive
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.0   0.00044       1.3      15      44 ..     171     200 ..     168     203 .. 0.89
   2 ?   -0.1   0.0      0.37   1.1e+03      14      47 ..     247     279 ..     244     283 .. 0.75

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00044
                   HHHS-HHHHHHHHHHHHHHHTTSS-HHHHH CS
  Catalase-rel  15 yrsmseeekerlvnniafelskvedeeiqe 44 
                   + s+ e  + ++++n+ ++ls++++e++ e
    EPX73267.1 171 FMSLPESYRHHFIANLHNALSGASTEDVDE 200
                   78999999****************999876 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.37
                   HHH.HS-HHHHHHHHHHHHHHHTTSS-HHHHHHHH CS
  Catalase-rel  14 lyr.smseeekerlvnniafelskvedeeiqerql 47 
                    y+ +  +  + ++v+++ +  ++++  ++  +++
    EPX73267.1 247 VYEdVARDTNRGHTVKAVCETFQQAK--DVGYKVV 279
                   577778899999*****999999986..5555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (544 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       412  (0.0229795); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 3758.68
//
Query:       EPX73268.1  [L=1095]
Description: Ca2/Mn2 transporting P-type ATPase P5 type Cta5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.9e-31  107.6   1.2    3.4e-30  104.9   0.0    2.3  2  E1-E2_ATPase     E1-E2 ATPase
    2.2e-12   47.2   0.0    5.9e-12   45.8   0.0    1.8  1  P5-ATPase        P5-type ATPase cation transporter
    6.8e-07   29.8   0.0     0.0025   18.1   0.0    2.4  2  Hydrolase        haloacid dehalogenase-like hydrolase
    1.3e-06   28.4   0.0    3.1e-06   27.2   0.0    1.6  1  Cation_ATPase    Cation transport ATPase (P-type)
    1.6e-05   24.5   0.0    3.9e-05   23.2   0.0    1.6  1  Cation_ATPase_N  Cation transporter/ATPase, N-terminus
  ------ inclusion threshold ------
      0.051   13.4   0.6        0.2   11.5   0.3    2.1  2  DUF2691          Protein of unknown function (DUF2691)


Domain annotation for each model (and alignments):
>> E1-E2_ATPase  E1-E2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.9   0.0   1.2e-33   3.4e-30       6     181 .]     256     457 ..     253     457 .. 0.92
   2 ?   -1.8   3.1      0.62   1.9e+03     122     160 ..    1040    1087 ..    1029    1094 .. 0.65

  Alignments for each domain:
  == domain 1  score: 104.9 bits;  conditional E-value: 1.2e-33
                   EEEEE-TTS-EEEEGGG--TTSEEEEETT-..B--SEEEEEEE-SEEE-TTTS---S-EE-........................G-TTEE-TT-EE CS
  E1-E2_ATPase   6 takvirdgteeeidakelvpGDivllkagd..rvpaDgrivegsaevdesaLTGEslpvek........................ekgdmvfsGtvv 76 
                   t +vird++ ++i  +elv GD++ l + +  + p+Dg++++g++ vdes+LTGEslp++k                        ++g+++ +  + 
    EPX73268.1 256 TLTVIRDNKKKNIYGDELVSGDLICLTSDEckVCPVDGILLSGTCMVDESMLTGESLPATKhalkhlsleyflnnaynvfsphvlHAGTKLLQINST 352
                   679***********************98543378*****************************************9999666666666666666666 PP

                   EE-EEEEEEEE-TTTSTTTTTSTTS--------HHHHHHHHHHHHHHHHHHHHHHHHHHS-STTTSSTTHHHHHHHHHHHHHS-TTHHHHHHHHHHH CS
  E1-E2_ATPase  77 vsgeakavVtatgedtelgkiarlveeakskktplqkkldklgkvlvpvvlliallvflialllgkslaeallralallvaaiPcaLplavplalal 173
                   ++ ++ +++++tg +++ g+++r + +++ + ++l k   ++ k +++++l+++l++ l+++ +  s  ++llr+l+++++ iP+aLp+++++ +a+
    EPX73268.1 353 LENPCYVIAIRTGFSSKRGQLIRDLLYPHTRVSQLYKDSMSFLKLMITFSLFFVLFLSLYLYKHHASFSHILLRSLDVVTILIPPALPATLSIGIAN 449
                   66******************************************************9999999999999**************************** PP

                   HHHHHHHT CS
  E1-E2_ATPase 174 garrlakk 181
                   ++ rl++k
    EPX73268.1 450 AIYRLSQK 457
                   ****9875 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.62
                    HHHHHHHHHHHHHHS-STTTSSTT.........HHHHHHHHHHHHHS- CS
  E1-E2_ATPase  122 lvpvvlliallvflialllgksla.........eallralallvaaiP 160 
                    +v+  ++i++++++i++l g++++          + +r++ ++++a P
    EPX73268.1 1040 YVTSLIIISIIFLFIFFLAGQFWIskvlhivflPMSYRFIIVFLGAGP 1087
                    455555566666666666666665555566677777777777777766 PP

>> P5-ATPase  P5-type ATPase cation transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.8   0.0     2e-15   5.9e-12       1      82 [.      30     111 ..      30     131 .. 0.93

  Alignments for each domain:
  == domain 1  score: 45.8 bits;  conditional E-value: 2e-15
   P5-ATPase   1 edleieiaGyrtsrwrlalyilgciltlGlllLlfrWlPewrvkltgkpcpLkeadvvliedefgelsvkkvrkleyerpls 82 
                 e+++++++ y+ ++ r+++ +++ il+lGl++L + W+P++rv++t ++c + + + v i d+ g+ s+++v k ++++p+ 
  EPX73268.1  30 EEESVVLHPYKENYQRALVLTILEILSLGLFRLFLLWFPQYRVSWTSQACGIDDIEYVEIIDQKGNSSLERVCKRSFQQPVP 111
                 688999**********************************************************************999754 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   8.3e-07    0.0025       2     156 ..     474     721 ..     473     745 .. 0.74
   2 !    9.2   0.0   0.00046       1.4     164     210 .]     801     850 ..     774     850 .. 0.69

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 8.3e-07
                 SEEEEESBTTTBCHHHHHHHHHHHH.........................CHHHHHHHHHHHHCHHHHHHHHHHHHH...........HHHHHHHHHET CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx.........................xxxxxxxxxxxxxxxxxxxxxxxxxxx...........xxxxxxxxxxx RF
   Hydrolase   2 ktvvfDkdGTLttgepsvedvivsa.........................alalaaaletgsehpigkalvaaakar...........sgaltgfatfi 64 
                 + +vfDk+GT+t+ + ++  ++ ++                         +                      +++            + +l+ fa f+
  EPX73268.1 474 DIFVFDKTGTITEENVQLSCTYIKNahnnleiarcandfsasqtmisnisT----------------------CCQSlqlingsivgdPLELALFAFFQ 550
                 679*********888444433333323433443443333333333333332......................22223444444444444444455555 PP

                 TTE........................................................HHHHTHHHHHHHH....HCHHHHHHHHHHHHHHCHHHHHH CS
                 xxx........................................................xxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  65 grg........................................................ayaigkpewltal....dippdlgaaigsaqsqgrtvall 103
                 gr                                                          + +g +e + +     +ip++l +  +++ s+g  v  +
  EPX73268.1 551 GRFinsyelnsglhnalfavtsglagedaiytiprsfefdpvirrmsviaisenkktpmLFSKGAVESILSIcspkTIPENLYNVLDELSSKGFRVLAC 649
                 5555555555555566666666667888999999999999999999*9999999998888888888888888999************************ PP

                 .....................TTHHHHHHHHHHTHHBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTT CS
                 .....................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 104 .....................qaralavftiadplkvkpeaaeavasLkaagievvlltgdnpetaeraanqlG 156
                                      + +  +++ ++ +  +k +   +++ +++a i +++++gd+  t   + ++ G
  EPX73268.1 650 awkplrtdtdvqqilresvekNLNFEGLLVFESK--IKRDSYSVMNVFNKASIHIAVCSGDSLYTSLYVGKKSG 721
                 *******************998899999999999..*************************9888777777766 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00046
                 EEHHCES...STTTSHHHHHHHHHHHTSTGGGEEEEESSHHHHHHHHHTT CS
                 xxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 164 iasdiet...vakpspegkvaaireLqgkpeevamVGDgvnDaaalaaAg 210
                 +  +i++    a  sp +k++ ++ ++  +  v + GDg+nD  al++ +
  EPX73268.1 801 LKCIIKKtkiLARMSPTDKLKYVELCKMLGYTVGFCGDGANDCLALKRSD 850
                 33333334789999999999999999966667**************9865 PP

>> Cation_ATPase  Cation transport ATPase (P-type)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.2   0.0     1e-09   3.1e-06      18      89 ..     535     624 ..     487     625 .. 0.86

  Alignments for each domain:
  == domain 1  score: 27.2 bits;  conditional E-value: 1e-09
  Cation_ATPase  18 kllGnktEsALlvlaeklgldteelree..................tkkvqeipFnssrKrmsvvlklepekkvrlyvKGApeiilkrCt 89 
                    +++G++ E AL  + +   ++  el++                   +++ + ++F+ + +rmsv+   e++k+ +l+ KGA e+il+ C+
     EPX73268.1 535 SIVGDPLELALFAFFQGRFINSYELNSGlhnalfavtsglagedaiYTIPRSFEFDPVIRRMSVIAISENKKTPMLFSKGAVESILSICS 624
                    489*************9966666666666667777788888888889999**************************************97 PP

>> Cation_ATPase_N  Cation transporter/ATPase, N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.0   1.3e-08   3.9e-05      19      69 .]     164     213 ..     152     213 .. 0.93

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 1.3e-08
  Cation_ATPase_N  19 nGLtqaeaaerlkkyGpNelkekkkkslwvkllkqftnplvilLlvaalvs 69 
                       GL+++++ ++++ yGpN l + ++k+ + +l  ++ +p++++ l++++v+
       EPX73268.1 164 CGLNTQTVSNLRQIYGPNLL-KLEEKTTVNILCYEVLHPFYLFQLFSVIVW 213
                      6*******************.88999999*******************996 PP

>> DUF2691  Protein of unknown function (DUF2691)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.3   6.8e-05       0.2      72     121 ..     671     720 ..     654     747 .. 0.82
   2 ?   -2.2   0.0       1.1   3.4e+03      46      73 ..     734     761 ..     724     761 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 6.8e-05
     DUF2691  72 YliFadlkafpkkklakdiktyeeflkskcelvllivDssyvtiyckdqe 121
                  l F  l +f++k++ +  + ++ f k++ +++++  Ds y+++y+ +++
  EPX73268.1 671 NLNFEGLLVFESKIKRDSYSVMNVFNKASIHIAVCSGDSLYTSLYVGKKS 720
                 4669999**************************************97765 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1.1
     DUF2691  46 dealFpeeeevlegeelkktlkkkdyYl 73 
                 +e+ F+ +++v ++ ++k + +k+d+Yl
  EPX73268.1 734 NEEKFNYDHSVNDDVKFKLYNVKEDCYL 761
                 3677999999999999999999999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1095 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       728  (0.0406046); expected 358.6 (0.02)
Passed bias filter:                      297  (0.0165653); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.71u 0.33s 00:00:01.04 Elapsed: 00:00:00.48
# Mc/sec: 6857.76
//
Query:       EPX73269.1  [L=427]
Description: Clr6 histone deacetylase complex subunit Prw1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.9e-20   72.8   9.6    4.1e-06   27.4   0.1    5.8  5  WD40         WD domain, G-beta repeat
    2.5e-19   69.3   0.4    8.9e-19   67.5   0.1    2.1  2  CAF1C_H4-bd  Histone-binding protein RBBP4 or subunit C of CA


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.1   6.2e-05      0.56      10      38 .]     181     211 ..     163     211 .. 0.73
   2 !    7.6   0.2   0.00084       7.6       7      37 ..     228     260 ..     223     261 .. 0.81
   3 !   27.4   0.1   4.6e-10   4.1e-06       3      38 .]     271     308 ..     269     308 .. 0.90
   4 !   13.6   0.0   1.1e-05     0.098       3      38 .]     315     352 ..     313     352 .. 0.83
   5 !   14.8   0.1   4.6e-06     0.041       8      37 ..     377     408 ..     371     409 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 6.2e-05
                 S.SSEEEEEEETTSSE.......EEEEETTSEEEEEE CS
        WD40  10 H.ssvtslafspdgaw.......lasGsdDgtvriWd 38 
                 H  + tsl+      w       l+sGs+D t+  Wd
  EPX73269.1 181 HdLPCTSLC------WnymkqgqLVSGSRDSTICHWD 211
                 533368886......33344446679**********9 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.00084
                 EESS.SSEEEEE.EETTSSEEEEEETTSEEEEE CS
        WD40   7 ltGH.ssvtsla.fspdgawlasGsdDgtvriW 37 
                 +++H +++++++   ++g+ +as s D+++++ 
  EPX73269.1 228 ISTHeQPINDVKyHFKHGDIFASVSSDQHLHLH 260
                 679*999****998888888887666***9986 PP

  == domain 3  score: 27.4 bits;  conditional E-value: 4.6e-10
                 EEEEEESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 
                 +l+++ +H s+v+++af+p ++++ a++s D+t+ +Wd
  EPX73269.1 271 PLKSIHAHsSDVNAVAFNPLNDFImATCSADKTIALWD 308
                 789999**888************846999********9 PP

  == domain 4  score: 13.6 bits;  conditional E-value: 1.1e-05
                 EEEEEESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 
                  l+tl+GH ++v+ ++fsp+   + +s s D+   +Wd
  EPX73269.1 315 RLYTLEGHeDHVSNVKFSPHEEPVlVSTSVDRRTLLWD 352
                 5899****999****988888875157799*******9 PP

  == domain 5  score: 14.8 bits;  conditional E-value: 4.6e-06
                 ESS.SS.EEEEEEETTSSE.EEEEETTSEEEEE CS
        WD40   8 tGH.ss.vtslafspdgaw.lasGsdDgtvriW 37 
                  GH s+ + +++++p+ +w la++ +D+ + +W
  EPX73269.1 377 GGHtSCtI-DMDWCPNYNWtLATAAEDNILQLW 408
                 69*64468.**********999999******** PP

>> CAF1C_H4-bd  Histone-binding protein RBBP4 or subunit C of CAF1 complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.5   0.1   9.9e-23   8.9e-19       1      66 [.      28      96 ..      28      97 .. 0.93
   2 ?   -2.1   0.0      0.53   4.7e+03      24      32 ..     183     193 ..     180     231 .. 0.66

  Alignments for each domain:
  == domain 1  score: 67.5 bits;  conditional E-value: 9.9e-23
                 HHHHHHHHHHHHHEEEEEEEE-SS--S-EEE-S-B--...-.EEEEEEEE----TTSS-EEEEEEEEEEE CS
  CAF1C_H4-bd  1 eeylewkknapfLYdmlhshslewPsLsfdwlPdtvs...s.lskqrllvGtqtsgkeqnylyvakvslp 66
                 eey++wkkn pfLYd++++ +lewP+ s +w+Pd++    + +++q++l+G +++   + yl +a ++lp
   EPX73269.1 28 EEYKIWKKNSPFLYDLIITRALEWPCVSLQWYPDQQLfpeHgYTEQNVLLGVRAD-AGKYYLAIAGIQLP 96
                 7*********************************76679989************8.88899999988887 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.53
                  S--S-EEE..- CS
  CAF1C_H4-bd  24 wPsLsfdw..l 32 
                   P++s  w  +
   EPX73269.1 183 LPCTSLCWnyM 193
                  68888888431 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (427 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       642  (0.0358079); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.46
# Mc/sec: 2814.95
//
Query:       EPX73270.1  [L=147]
Description: mitocondrial FUN14 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.6e-15   55.5   0.3    7.1e-15   55.2   0.3    1.1  1  FUN14     FUN14 family


Domain annotation for each model (and alignments):
>> FUN14  FUN14 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.2   0.3     4e-19   7.1e-15       1      91 []      43     144 ..      43     144 .. 0.87

  Alignments for each domain:
  == domain 1  score: 55.2 bits;  conditional E-value: 4e-19
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...........xxxxxxxxxxxxxxxxxx RF
       FUN14   1 igiGaviGlvtGfalkkvgKlaaiavGggllllqilasqgyikvnwdkiekdveelldrnkdgklgtede...........klltenlpfsagFlaGfl 88 
                 i +G+ +Gl++Gfal k+g+l+++a++  l+++ +++++g+i++nw++i++++   ++r +d  ++ +++           +++ +n  f+++Fl +f+
  EPX73270.1  43 IFTGSSLGLAAGFALGKFGQLFIVACSSVLATIAYINTKGLIRINWSRIQSRFIGQTERFGDLSTNVSEHlpaqstftsirNWALTNPCFKMSFLSAFY 141
                 578***********************************************999976666666555554448888878888888888************* PP

                 xxx RF
       FUN14  89 lGl 91 
                 +Gl
  EPX73270.1 142 VGL 144
                 *96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       363  (0.0202465); expected 358.6 (0.02)
Passed bias filter:                      268  (0.0149478); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.41
# Mc/sec: 1082.93
//
Query:       EPX73271.1  [L=663]
Description: HAL protein kinase Hal4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      2e-49  168.4   0.0    4.2e-49  167.3   0.0    1.5  2  Pkinase      Protein kinase domain
    1.2e-28  100.1   0.0      2e-28   99.4   0.0    1.4  1  Pkinase_Tyr  Protein tyrosine kinase
      0.009   15.4   0.0      0.017   14.5   0.0    1.4  1  Kinase-like  Kinase-like
  ------ inclusion threshold ------
        0.1   11.9   0.0       0.21   10.9   0.0    1.5  1  Kdo          Lipopolysaccharide kinase (Kdo/WaaP) family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0      0.84   3.8e+03     227     254 ..     308     335 ..     277     343 .. 0.59
   2 !  167.3   0.0   9.3e-53   4.2e-49       5     264 .]     382     650 ..     379     650 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 0.84
                 .HHHTTS-HHHHHHHHHHT-SSGCCSTT CS
     Pkinase 227 lpeaseiseeakdllkkllkkdpkkRlt 254
                  ++++++ + +kd+l    kk +++R  
  EPX73271.1 308 AKRQEKLGKMLKDFLAGNSKKREEERAA 335
                 3444555666666666666666666654 PP

  == domain 2  score: 167.3 bits;  conditional E-value: 9.3e-53
                 EEEEEESSEEEEEEE.....ETTTTEEEEEEEEECHCHCHHHH..HHHHHHHHHHHHHSCTTB--EEEEEEE.SSEEEEEEE--TTEBHHHHHHHHSS- CS
     Pkinase   5 eklGeGsfGkVykav.....eketgkivAvKkikkekakkkke..kkvlrEikilkklkhpnivrlyevfee.kdelylvleyveggeladllerkgsl 95 
                 e +G+G+fG+V   +     +++++  +AvK+++++ ++++k+  k++++E  i  +l+hpn+++ ++ +++ k +++ v+e+++gg+l +l+ + g l
  EPX73271.1 382 EVIGRGAFGVVRISHkvdpqNSRSELLYAVKEFRRKPTESQKKytKRLTSEFCISSSLRHPNVIHTLDLIQDnKGDYCEVMELCSGGDLYTLIMAAGRL 480
                 78*********6554111115566778*********999999999**************************94567789******************** PP

                 -HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.....BCTTTSCGGGS-HHHHTTSCB.SHHHHHHHHHHHHH CS
     Pkinase  96 seeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.....ltsfvgtseYlAPEvlkeney.skkvDvWslGvily 188
                 ++ ea  ++kq+++g++ylH++g+ HrDlKpeN+L+  +g +KitDFG  + ++   +     +   +g+  Y+APE  +ene+  ++vDvW++Gvi +
  EPX73271.1 481 EPMEADCFFKQLMRGVDYLHDMGVAHRDLKPENLLLTINGSIKITDFGNGECFRMAWEkeahmTCGLCGSAPYIAPEEYTENEFdPRAVDVWACGVIYM 579
                 ************************************************9987776555567888899*****************7789*********** PP

                 HHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS.-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 189 elltgkppfsgekgkekvekeldqlekilkilgetkeklpeasei.seeakdllkkllkkdpkkRltaeellqhpyl 264
                  + tg+++++  k++e      d++ + + + ++++  ++  + +  + +++ l ++l+ +p  Rlta+++++++++
  EPX73271.1 580 AMRTGRHLWRVAKKSE------DEFYAKYLMDRKNESGYEPIEMLeRSRCRNTLYNILHPNPGYRLTAKQIMKSEWV 650
                 **********444333......332222233334444444444446789**************************96 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.4   0.0   4.5e-32     2e-28       4     209 ..     381     591 ..     379     647 .. 0.79

  Alignments for each domain:
  == domain 1  score: 99.4 bits;  conditional E-value: 4.5e-32
                  EEEEEEESSEEEEEEEEET.TTTSSEEEEEEEEESTTSSHHH...HHHHHHHHHHHHTS-BTTB--EEEEEE.SSSSEEEEEE--TTEBHHHHHHHTC CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkg.ekekkevkVavKtlkeeateee...keelleeakimkklkhpnivkllgvct.keepllivteyvkgGdLlkfLrkke 96 
                  ++ +G+GafG V   +  + +++++e+  avK ++++ te++   +++l++e  i ++l+hpn+++ l ++  +++ ++ v+e+++gGdL + + +  
   EPX73271.1 381 QEVIGRGAFGVVRISHKVDpQNSRSELLYAVKEFRRKPTESQkkyTKRLTSEFCISSSLRHPNVIHTLDLIQdNKGDYCEVMELCSGGDLYTLIMAA- 477
                  789*********8877666699999*********7766655533478999**********************77888****************9997. PP

                  TTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEET..TTSSEEEETTSSTSGGGGS-HHHHHHSEEE.HHHHHHHH CS
  Pkinase_Tyr  97 kekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardi..ekddeyvkkeeaklpvkWmapEslkekkft.sksDvWsf 191
                    +l+  +  +f  q+ +G++yL+++ + Hrdl   N Ll+ n  +ki+DfG  +      ++e +++ +   +  ++apE  +e++f   + DvW+ 
   EPX73271.1 478 -GRLEPMEADCFFKQLMRGVDYLHDMGVAHRDLKPENLLLTINGSIKITDFGNGECFrmAWEKEAHMTCGLCGSAPYIAPEEYTENEFDpRAVDVWAC 574
                  .99************************************************977665213455567777777899************983567***** PP

                  HHHHHHHHTTSSGTTTTS CS
  Pkinase_Tyr 192 GvllwEiftlgespypgl 209
                  Gv+ + + t g++ ++  
   EPX73271.1 575 GVIYMAMRT-GRHLWRVA 591
                  **9887776.66554433 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   3.8e-06     0.017     152     196 ..     491     531 ..     467     583 .. 0.72

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 3.8e-06
  Kinase-like 152 qlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragt 196
                  ql+r + +L++ g+ h +++++nlll  +g +++++f++    g+
   EPX73271.1 491 QLMRGVDYLHDMGVAHRDLKPENLLLTINGSIKITDFGN----GE 531
                  89999********************************84....44 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   4.7e-05      0.21     124     166 ..     489     527 ..     469     539 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 4.7e-05
         Kdo 124 lkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDl 166
                 +k++ r +  lh++gv H+dl + n+ll  ++     i + D+
  EPX73271.1 489 FKQLMRGVDYLHDMGVAHRDLKPENLLLTING----SIKITDF 527
                 5777788999******************9887....5555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (663 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1351  (0.0753528); expected 358.6 (0.02)
Passed bias filter:                      566  (0.031569); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.84u 0.33s 00:00:01.17 Elapsed: 00:00:00.49
# Mc/sec: 4096.86
//
Query:       EPX73272.1  [L=450]
Description: cytoplasmic serine-tRNA ligase Srs1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.6e-35  120.9   0.0    9.3e-35  120.2   0.0    1.3  1  tRNA-synt_2b  tRNA synthetase class II core domain (G, H, P, 
    1.1e-26   93.1   6.0    1.1e-26   93.1   6.0    1.7  2  Seryl_tRNA_N  Seryl-tRNA synthetase N-terminal domain
  ------ inclusion threshold ------
       0.28   11.3   2.9       0.63   10.2   2.9    1.6  1  GED           Dynamin GTPase effector domain
       0.67   10.3   3.7       0.83   10.0   1.2    2.3  2  GCR1_C        Transcriptional activator of glycolytic enzymes


Domain annotation for each model (and alignments):
>> tRNA-synt_2b  tRNA synthetase class II core domain (G, H, P, S and T)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.2   0.0   2.1e-38   9.3e-35       1     179 []     224     411 ..     224     411 .. 0.92

  Alignments for each domain:
  == domain 1  score: 120.2 bits;  conditional E-value: 2.1e-38
                   EEEEETTSEEEEE-SSSHHHHHHHHHHHEE.EB.GGSSEEEEEEEEEEBTTTS....TBCTTTB-SEEEEEEEEEEESGGGHHHHHHHHHHHHHHHH CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xx.xxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2b   1 YkledrndreyiLkPtneetfvelirdevl.rs.krLPlklyqiqtkyRdEks....dsrGLlRvreFhqkdgyvfhaeaslddslrdlikaisrif 91 
                   Yk+ d  d+e +L++t+e+++ + +++e+  ++ ++LP+k++ ++t+yR+E+     d  G++Rv+ F++ +++v   ++++++ + d+++ +++++
    EPX73272.1 224 YKVVDG-DEERYLIATSEQPISAYHSNEWFeKPaEQLPIKYAGYSTCYRREAGshgrDAWGIFRVHAFEKIEQFVLTEPEKSWEAFDDMMNHAEEFY 319
                   566555.69999*****************9777888****************66887777************************************* PP

                   HHTT.SCEEEEEEGTTSCBTTSEEEEEEEEETTTSEEEEEEEEEEEETHHHHHTTE..EEECTTS.SEEEEEEEEEE.EEHHHHHHHHHHHH CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxx.xxxxxxxxxxx.xxxxxxxxxxxxxx RF
  tRNA-synt_2b  92 erlglefraiielmsaksadykdkkefeavsesltkgieigtiqklgtrlserlga..tvldenn.reksvimicaa.igveRllsaileqn 179
                   ++l ++fr++  + +a +  +++k ++ea+++ ++ + e+++++++ +++s+ l++   v+++ + ++k v+ ++ + +++eR +++i+e++
    EPX73272.1 320 KALEIPFRVVSIVSGALNNAAAKKFDLEAWFPYQGEYKELVSCSNCTDYQSRNLEIrcGVKKMGDrEKKYVHCLNSTlCATERAICCIIENY 411
                   ***************9****************************************65577776646678*******999**********96 PP

>> Seryl_tRNA_N  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.1   6.0   2.5e-30   1.1e-26       1     108 []       1     112 [.       1     112 [. 0.99
   2 ?   -2.2   0.0       1.1   4.9e+03      79     100 ..     205     226 ..     200     228 .. 0.78

  Alignments for each domain:
  == domain 1  score: 93.1 bits;  conditional E-value: 2.5e-30
                   ---HHHHHH....-HHHHHHHHCCCTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCTTS-TCCCCCCCHHHHHHHHHHHHHHHHH CS
  Seryl_tRNA_N   1 MLDiklire....npeavkeklkkRgedkadvdelleldekrrelqveleelqaerNelskeIgkakkkkedaeeliaevkelkeelkaleaelkel 93 
                   MLDi+l+++    npe+++e+++kRg+d+  vd+++e+++++ +l++el++ ++  N+++keIg+++k+keda+el+ae ++l e+ k+l +++++ 
    EPX73272.1   1 MLDINLFQTekggNPELIRESQRKRGADVGVVDRVIEMYKEWVALRFELDNTNKSMNRAQKEIGMKMKAKEDASELLAEKNALTERKKNLVEQETAK 97 
                   ************************************************************************************************* PP

                   HHHHHHHHCTS---- CS
  Seryl_tRNA_N  94 eaeleklllaiPNip 108
                   ++e+ +++++i+Ni+
    EPX73272.1  98 NKEMLSVVQSIGNIV 112
                   *************96 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1.1
                   HHHHHHHHHHHHHHHHHHHHHH CS
  Seryl_tRNA_N  79 lkeelkaleaelkeleaelekl 100
                   l++++ a +a+l++ ++el k+
    EPX73272.1 205 LNKDVMARTAQLEQFDEELYKV 226
                   5677777888899999988876 PP

>> GED  Dynamin GTPase effector domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   2.9   0.00014      0.63      38      78 ..      53      93 ..      51     108 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00014
                HHHHCCCCCHHHCCTTSGGGHHHHT---SCHCCCCHHHHHH CS
         GED 38 neakeslqkellakLykkedldeLLkEdeeiaekRkelkkr 78
                n++ +  qke+  k+  ked +eLL+E+++++e++k+l ++
  EPX73272.1 53 NKSMNRAQKEIGMKMKAKEDASELLAEKNALTERKKNLVEQ 93
                7788999*****************************99775 PP

>> GCR1_C  Transcriptional activator of glycolytic enzymes
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   1.2   0.00018      0.83       8      78 ..      33     107 ..      31     108 .. 0.88
   2 ?   -1.0   0.0      0.52   2.3e+03      15      41 ..     249     273 ..     248     280 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00018
      GCR1_C   8 ktVedlwnEykegln.....gkpsikslekkygkrWrkdskesklfsrRkkiidfierlieeegitreeavkilee 78 
                 + V ++++E+   l+      + s    +k+ g +++ ++++s+l ++++++ +  ++l+e+e+ + +e+++++++
  EPX73272.1  33 DRVIEMYKEWVA-LRfeldnTNKSMNRAQKEIGMKMKAKEDASELLAEKNALTERKKNLVEQETAKNKEMLSVVQS 107
                 568899999976.444554588899999******************************************999875 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.52
      GCR1_C  15 nEykeglngkpsikslekkygkrWrkd 41 
                 nE++e  +++ +ik+    y +++r++
  EPX73272.1 249 NEWFEKPAEQLPIKYA--GYSTCYRRE 273
                 79***99999999974..455666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (450 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1128  (0.0629148); expected 358.6 (0.02)
Passed bias filter:                      561  (0.0312901); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 3245.11
//
Query:       EPX73273.1  [L=345]
Description: peroxin-3 peroxisome import protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      6e-15   55.2   6.4    1.8e-10   40.5   0.2    3.7  2  Peroxin-3  Peroxin-3


Domain annotation for each model (and alignments):
>> Peroxin-3  Peroxin-3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.5   0.2   9.8e-15   1.8e-10     123     211 ..      56     141 ..      26     164 .. 0.78
   2 !   12.5   1.5     3e-06     0.054     417     470 .]     271     332 ..     180     332 .. 0.77

  Alignments for each domain:
  == domain 1  score: 40.5 bits;  conditional E-value: 9.8e-15
   Peroxin-3 123 lseeesssssstvsasseassseesaseeseksekeseessskprksKaeLWnelkiksitRtltliYtlslLtLltriQLnlLgRrsY 211
                 ls     +sss +  ++  s+ ee+ + +s  ++ + ++s+ ++ ++K  LWnelk++si+R+lt++ +++   +lt++ L++LgR+ +
  EPX73273.1  56 LS---DGQSSSCSVFDAIVSEIEEQLPLHSIVQNLRDSRSTDQNGEKKLFLWNELKFQSIVRILTTLCVITECNMLTKVSLTILGRKDF 141
                 33...34455555555555555556665666566667889999999****************************************976 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 3e-06
   Peroxin-3 417 e.......eeeeeekkvkLAkllpvlsrqahailng.vpneylealesvreLeafsAvvYss 470
                         ++   ++ ++LAk+l+ +++ + +i+++ v+ ++ e++++ +e + f+ ++Yss
  EPX73273.1 271 MrlllshlKTFLPTEDARLAKMLSFFTKFSGSITESpVKESFFESISHNSEARTFASIIYSS 332
                 13333334555677899******************9889**********************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (345 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       514  (0.0286686); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.28s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2453.94
//
Query:       EPX73274.1  [L=233]
Description: urease accessory protein UreF [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.4e-16   58.9   0.0      1e-15   58.5   0.0    1.2  1  UreF      UreF


Domain annotation for each model (and alignments):
>> UreF  UreF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.5   0.0   5.7e-20     1e-15       6     124 ..      42     181 ..      38     187 .. 0.87

  Alignments for each domain:
  == domain 1  score: 58.5 bits;  conditional E-value: 5.7e-20
                 HHHHHHHHHHTTHHHHTHHHHHHHHHHHHHTT-HHHHHHHHHHHHHH--SHHHHHHHHHHHHHHHHHHHH-............................ CS
        UreF   6 slaawledqLllglarldlavlarayraaragdaaalrelddwllatretaelrlaseqmGrsllrllrkl....................t....... 77 
                 ++ ++l  + l++l +++l+ +++ ++       ++  ++++ ++ t+++   ++ s+ +G++ll ++ k                     +       
  EPX73274.1  42 AFFDFLPLS-LNSLLYTNLPTVKESWETP-----ENYLQIEEFFESTQTCTIGQKVSTMQGKALLGVWVKSfstfmipneiskllmnydylVrhrkalg 134
                 566788888.88999***********776.....6************************************9999988887777666655516677889 PP

                 -HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHHHTT--HHHH CS
        UreF  78 hypvafglaaaalgipleeallaylfswaenlvsAavklvplGqtag 124
                 h+pv++g++++algi+le+++++yl +++++++sAav+l  l   + 
  EPX73274.1 135 HFPVIWGILCRALGISLERTCYLYLLNHTKSICSAAVRLDVLSSFQY 181
                 ***************************************99887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       329  (0.0183502); expected 358.6 (0.02)
Passed bias filter:                      272  (0.015171); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1691.60
//
Query:       EPX73275.1  [L=152]
Description: hypothetical protein SOCG_01028 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       532  (0.0296726); expected 358.6 (0.02)
Passed bias filter:                      279  (0.0155614); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.28s 00:00:00.70 Elapsed: 00:00:00.44
# Mc/sec: 1029.63
//
Query:       EPX73276.1  [L=952]
Description: rho-type GTPase activating protein Rga3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.1e-41  139.6   0.3    1.8e-40  138.2   0.3    1.7  1  RhoGAP     RhoGAP domain
    1.8e-16   60.1  20.8    4.6e-10   39.6   4.7    4.1  4  LIM        LIM domain
    0.00013   21.8   5.9    0.00013   21.8   5.9    4.4  4  C1_1       Phorbol esters/diacylglycerol binding domain (C1 d
     0.0033   17.8   1.9      0.011   16.1   1.9    1.9  1  CENP-H     Centromere protein H (CENP-H)
  ------ inclusion threshold ------
      0.092   12.2   2.7      0.049   13.0   0.4    1.6  2  RNase_E_G  Ribonuclease E/G family
          7    7.0  11.4         17    5.8   0.2    3.0  3  Muted      Organelle biogenesis, Muted-like protein


Domain annotation for each model (and alignments):
>> RhoGAP  RhoGAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.2   0.3   6.2e-44   1.8e-40       1     148 [.     774     920 ..     774     924 .. 0.98

  Alignments for each domain:
  == domain 1  score: 138.2 bits;  conditional E-value: 6.2e-44
                 BHHHHHHHHHHHHHTTTSTTTTTS-S-HHHHHHHHHHHHHTGGGCTTTTTSCHHHHHHHHHHHHHHSSSTTTTGGHHHHHHHHHTSSSHHHHHHHHHHH CS
      RhoGAP   1 PiivekcvefiekrgldtegiyRvsgskarvkelreafdkgkavdsdleeedvhavaslLKrfLrelpepLltkelyeelieaaksedeeerlealkel 99 
                 P++v+ c e ++++gl+ egiyR+sgs+++v++  + f++++ ++ +    d+ a +s+LK++L +lp p++++e+y +l++a + +d   + e+++++
  EPX73276.1 774 PKVVQICAECVDAHGLHIEGIYRISGSASQVRAFIDMFEQNSIQV-ERLASDITACTSVLKTYLHKLPIPIIPDEQYRKLLKAEELDDGFAKEEMFRMV 871
                 99******************************************9.9**************************************************** PP

                 HTTS-HHHHHHHHHHHHHHHHHHHTHHHH---HHHHHHHHHHHHHT-TS CS
      RhoGAP 100 lekLPkenrdtLryLlehLkrvaenskenkMtaknLaivfaPtLlrpks 148
                 l++LP e+ ++++yLl+hL rva+n+++n Mt knLa+vfaPtL+r+ +
  EPX73276.1 872 LQELPVEHISIFNYLLQHLLRVADNADKNLMTRKNLATVFAPTLMRETD 920
                 **********************************************865 PP

>> LIM  LIM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.6   4.7   1.5e-13   4.6e-10       1      55 [.      16      73 ..      16      74 .. 0.92
   2 !   35.5   8.2   2.9e-12   8.7e-09       1      56 [.      75     128 ..      75     130 .. 0.88
   3 ?   -1.5   0.0       1.1   3.1e+03      41      54 ..     662     675 ..     655     678 .. 0.79
   4 ?   -7.5   7.1         6   1.8e+04      26      34 ..     686     691 ..     684     715 .. 0.52

  Alignments for each domain:
  == domain 1  score: 39.6 bits;  conditional E-value: 1.5e-13
                -TTT--BE-TTTEEEEETTEEEETTTSB-TTT-SB-CTT....CEEETTEEEEHHHHH CS
         LIM  1 CagCnkkiadrelvlkaldkvwHeeCFtCsdCqkeLkegs...fyekdgklyCkkdyl 55
                C +C+++++++e+ +++ ++ wH  CFtC++C ++L++ +   +   dgk++C+++ +
  EPX73276.1 16 CTRCEREFQRKETPISFGGRLWHNGCFTCAKCLNNLEQSNqllIQTSDGKPVCSDCSH 73
                **************************************99986666778******975 PP

  == domain 2  score: 35.5 bits;  conditional E-value: 2.9e-12
                 -TTT--BE-TTTEEEEETTEEEETTTSB-TTT-SB-CTT.CEEETT.EEEEHHHHHH CS
         LIM   1 CagCnkkiadrelvlkaldkvwHeeCFtCsdCqkeLkegsfyekdg.klyCkkdylk 56 
                 C  C+k i+d  l+     +++H++CF+Cs+C+k +++ + ++kdg ++yC+++  +
  EPX73276.1  75 CTVCQKAIQDYALM--NGFDSYHRDCFRCSNCRKVFNNSE-FVKDGrTVYCSDCSSQ 128
                 99*******87777..45578******************8.8889879******877 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 1.1
                 CEEETTEEEEHHHH CS
         LIM  41 fyekdgklyCkkdy 54 
                 +++++++++C++ +
  EPX73276.1 662 PVIVNETPVCQHVF 675
                 788999*****987 PP

  == domain 4  score: -7.5 bits;  conditional E-value: 6
                 TSB-TTT-S CS
         LIM  26 CFtCsdCqk 34 
                 CF+Cs   +
  EPX73276.1 686 CFICS---E 691
                 44443...2 PP

>> C1_1  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   2.7      0.23   6.8e+02      10      22 ..      12      37 ..       5      51 .. 0.60
   2 ?    4.4   4.7     0.011        34      11      38 ..      72     108 ..      65     111 .. 0.87
   3 ?    2.0   3.6     0.066     2e+02      13      35 ..     100     126 ..      94     128 .. 0.84
   4 !   21.8   5.9   4.4e-08   0.00013       1      46 [.     673     715 ..     673     720 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.23
                S--B-TTT-SB-.............- CS
        C1_1 10 qptfCkhCgefl.............w 22
                + ++C+ C+  +             w
  EPX73276.1 12 SGNYCTRCEREFqrketpisfggrlW 37
                56799999999966666666433222 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.011
                 --B-TTT-SB-........-S.SSS-EEEETTT--EE CS
        C1_1  11 ptfCkhCgefl........wg.kekqglkCswCkllv 38 
                 +++C+ C++ +        +    + +++Cs+C+ ++
  EPX73276.1  72 SHTCTVCQKAIqdyalmngFDsYHRDCFRCSNCRKVF 108
                 578**************997778999*******9876 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.066
                 B-TTT-SB-...-S.SSS-EEEETTT- CS
        C1_1  13 fCkhCgefl...wg.kekqglkCswCk 35 
                 +C+ C++ +   ++ k  + + Cs+C+
  EPX73276.1 100 RCSNCRKVFnnsEFvKDGRTVYCSDCS 126
                 699999999998666888999999996 PP

  == domain 4  score: 21.8 bits;  conditional E-value: 4.4e-08
                 --EEEE--SS--B-TTT-SB--SSSS-EEEETTT--EE-CCCCTTS CS
        C1_1   1 HhwvhrnfkqptfCkhCgeflwgkekqglkCswCkllvHkkChekv 46 
                 H +++    +p++C  C e +wg     ++C  C++ +H +C++k+
  EPX73276.1 673 HVFQVNAIFKPSRCFICSETIWG---SEVRCMKCSVACHSRCVKKL 715
                 99*******************55...568999999*******9986 PP

>> CENP-H  Centromere protein H (CENP-H)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   1.9   3.8e-06     0.011       1      55 [.     525     579 ..     525     594 .. 0.91

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 3.8e-06
      CENP-H   1 llplieqrdelssellklsqelrelqeeltevekenlrlkrknrelaaellelak 55 
                 l +l+e+r+el +++ + ++ l+e +e+  +++++nl+l   n++la++++++++
  EPX73276.1 525 LSNLLERRNELLQDYSNAQKLLSESLEASVHLNAKNLELADLNNSLAKQIQQKRE 579
                 57899*********************************************66554 PP

>> RNase_E_G  Ribonuclease E/G family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.4   1.7e-05     0.049      37     167 ..     445     584 ..     422     585 .. 0.76
   2 ?   -3.4   0.1       1.7     5e+03      57     137 ..     819     904 ..     814     932 .. 0.59

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.7e-05
   RNase_E_G  37 elkpeevGlIvRtaaegas.eeelekdleelkkkweeileka............kkrkapsllyeeedlllrvlrdllnedieeivvddkelyeeikey 122
                 +l++ + ++  R+ a+g +   +l++  + l+++  e++ek+            k     + l  +++ ++++lrd +++++++++   +el+++ ++ 
  EPX73276.1 445 KLTHLTESISSRSIASGSEsSLNLTEKKDALRTQKLEVCEKFfsfadvaddpilK-DPLHQSLVAAANAYMKMLRDNFSQELSNLLERRNELLQDYSNA 542
                 4444444555666665544144677777777777777777776666554444422.444789999********************************** PP

   RNase_E_G 123 leevapeleekvelyeeeeplfelysiekqiekalsrkvwlksGg 167
                  + ++++le +v+l     + +el ++++ ++k +++k +l++G+
  EPX73276.1 543 QKLLSESLEASVHLNA---KNLELADLNNSLAKQIQQKRELPQGA 584
                 **********999983...357999999**********9999997 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 1.7
   RNase_E_G  57 eelekdleelkkkweeileka.....kkrkapsllyeeedlllrvl.rdllnedieeivvddkelyeeikeyleevapeleekvely 137
                 e l++d++  ++  ++ l+k         ++++ l ++e+l   +  +++++  ++e+ v++ ++++ + + l +va+++ +++   
  EPX73276.1 819 ERLASDITACTSVLKTYLHKLpipiiP-DEQYRKLLKAEELDDGFAkEEMFRMVLQELPVEHISIFNYLLQHLLRVADNADKNLMTR 904
                 666777777777777777777555542.34555555555555554414556777777777777777777777766666666654444 PP

>> Muted  Organelle biogenesis, Muted-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.2    0.0056        17      46     114 ..     415     483 ..     411     495 .. 0.85
   2 ?    5.3   3.4    0.0077        23      51     122 ..     509     579 ..     500     580 .. 0.86
   3 ?   -4.1   0.0         6   1.8e+04      62      73 ..     918     931 ..     904     941 .. 0.68

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0056
       Muted  46 klvnelkeqllpkclesmkenLselnkkleaalekverllqkeleeekrkseqlqekeeerkaeweefl 114
                 +  +++  + + ++ es k +++ l+ +++++++ +e + +++  +  ++s +l+ek++++++++ e+ 
  EPX73276.1 415 ESNSNTPSSDSSSFFESYKIDMEALKLQINKLTHLTESISSRSIASGSESSLNLTEKKDALRTQKLEVC 483
                 5556677778889999999*****************************9999***99999888877765 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.0077
       Muted  51 lkeqllpkclesmkenLselnkkleaalekverllqkeleeekrkseqlqekeeerkaeweeflkelqekke 122
                   + +++++ ++ +++Ls+l+++ +++l++ ++ ++  l+e  + s +l++k+ e+ +  +++ k++q+k+e
  EPX73276.1 509 AANAYMKMLRDNFSQELSNLLERRNELLQDYSNAQKL-LSESLEASVHLNAKNLELADLNNSLAKQIQQKRE 579
                 45566788889999*****************999999.66777799*********************99975 PP

  == domain 3  score: -4.1 bits;  conditional E-value: 6
       Muted  62 s..mkenLselnkk 73 
                 +  m+ nL+++nk+
  EPX73276.1 918 EtdMHLNLKNVNKR 931
                 33488888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (952 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1306  (0.0728429); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.87u 0.32s 00:00:01.19 Elapsed: 00:00:00.55
# Mc/sec: 5172.97
//
Query:       EPX73277.1  [L=573]
Description: RNA polymerase I upstream activation factor complex subunit Rrn5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.051   13.8   0.0       0.21   11.8   0.0    2.0  2  Myb_DNA-binding  Myb-like DNA-binding domain


Domain annotation for each model (and alignments):
>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   1.2e-05      0.21       4      41 ..      75     113 ..      74     114 .. 0.97
   2 ?   -2.5   0.0      0.35   6.3e+03      32      43 ..     126     137 ..     124     137 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 1.2e-05
                      SBHHHHHHHHHHHHHHT.TCHHHHHHHHTSS-HHHHHHH CS
  Myb_DNA-binding   4 WteeEdelLleavkkhG.nrWkkIaerlggRtekqcrsr 41 
                      Wt +E   +  +++++G ++ +k++  +g++++ +++++
       EPX73277.1  75 WTSDEKRSFFHGLARYGkKNIDKVSYVIGSKSPSHVQHY 113
                      *****************999****************996 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.35
                      SS-HHHHHHHHH CS
  Myb_DNA-binding  32 gRtekqcrsrwr 43 
                      ++ + ++rsr++
       EPX73277.1 126 NHIDSSVRSRYL 137
                      567899****96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (573 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       616  (0.0343577); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.30s 00:00:00.96 Elapsed: 00:00:00.52
# Mc/sec: 3325.84
//
Query:       EPX73278.1  [L=494]
Description: ubiquitin-protein ligase E4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.8e-29  100.5   1.9    7.5e-29   99.5   1.9    1.5  1  Prp19        Prp19/Pso4-like
    1.8e-11   44.2   0.1    1.4e-05   25.3   0.0    4.4  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    0.00011   22.9   2.4        1.5    9.8   0.0    5.2  5  WD40         WD domain, G-beta repeat
      0.001   19.2   0.0     0.0023   18.1   0.0    1.6  1  U-box        U-box domain
     0.0035   15.7   0.0     0.0059   15.0   0.0    1.3  1  Frtz         WD repeat-containing and planar cell polarity ef
  ------ inclusion threshold ------
      0.012   15.6   0.0       0.32   11.0   0.0    2.5  2  BBS2_Mid     Ciliary BBSome complex subunit 2, middle region
      0.035   13.9   0.0       0.13   12.1   0.0    2.0  1  zf-Nse       Zinc-finger of the MIZ type in Nse subunit
       0.16   11.8   4.1       0.31   10.9   4.1    1.5  1  DUF1635      Protein of unknown function (DUF1635)


Domain annotation for each model (and alignments):
>> Prp19  Prp19/Pso4-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.5   1.9   3.4e-32   7.5e-29       2      67 ..      66     131 ..      65     132 .. 0.97

  Alignments for each domain:
  == domain 1  score: 99.5 bits;  conditional E-value: 3.4e-32
                 SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
       Prp19   2 atSiPslLstlqnEWDalmletfelrkqleqtrqeLsqaLYqnDAAvrViArllkerdearealae 67 
                 +tS+P+lLs +q+EWDal+le+f+lrk+l +t+qeLs++LY  DAA rVi+rl+kerdeareala+
  EPX73278.1  66 TTSLPALLSLFQEEWDALALEQFDLRKKLSETKQELSTSLYSLDAAFRVISRLTKERDEAREALAK 131
                 69*************************************************************986 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0      0.16   3.6e+02      59      81 ..     233     255 ..     221     283 .. 0.76
   2 !   25.3   0.0   6.4e-09   1.4e-05      29      92 .]     330     389 ..     319     389 .. 0.90
   3 !    8.4   0.0    0.0012       2.6      37      87 ..     377     428 ..     369     433 .. 0.82
   4 !    8.0   0.0    0.0015       3.4      25      66 ..     450     491 ..     431     494 .] 0.82

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.16
  ANAPC4_WD40  59 dgevrlldaesgkvvhslsvkse 81 
                  d++v+lld ++ k ++s++ + +
   EPX73278.1 233 DNRVSLLDCHTNKPLKSFDSSVT 255
                  78888888888888888876544 PP

  == domain 2  score: 25.3 bits;  conditional E-value: 6.4e-09
  ANAPC4_WD40  29 vwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWgen 92 
                  v+++   + ++++++L+++pdg+++av+ ++ge+++++  sg     +  ++ + +++l++gen
   EPX73278.1 330 VYSV---NISNTITALSFHPDGHIFAVGKKNGEIEFFETASGVSAARFGPQDGS-IQSLQFGEN 389
                  5555...67789************************************999995.999999875 PP

  == domain 3  score: 8.4 bits;  conditional E-value: 0.0012
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdg.evrlldaesgkvvhslsvksekavtcl 87 
                  +d++++sL++ ++g  La    +    ++ +  + k+vh ++++++++ + l
   EPX73278.1 377 QDGSIQSLQFGENGYWLAATATNEkGTSIWHLGKSKLVHVVPTDANTSAAVL 428
                  6899*************98666552799*************99988755555 PP

  == domain 4  score: 8.0 bits;  conditional E-value: 0.0015
  ANAPC4_WD40  25 ngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlld 66 
                  +  + w+l ++ e s +++LaW +d + L+  +++g+v ll+
   EPX73278.1 450 KASKSWNLVSKVEASLISNLAWMEDPHKLVYCTNQGSVCLLE 491
                  5567788888999************************99886 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1      0.89     2e+03       3      24 ..     246     265 ..     234     279 .. 0.66
   2 ?    0.7   0.0       0.5   1.1e+03      16      34 ..     304     321 ..     286     325 .. 0.83
   3 !    9.8   0.0   0.00066       1.5      10      35 ..     334     361 ..     327     364 .. 0.77
   4 ?    2.6   0.0      0.13   2.8e+02      11      28 ..     379     396 ..     372     407 .. 0.75
   5 ?    3.7   0.0     0.055   1.2e+02      13      36 ..     430     445 ..     411     447 .. 0.72

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.89
                 EEEEEESSSSEEEEEEETTSSE CS
        WD40   3 clrtltGHssvtslafspdgaw 24 
                 +l++++   svt++++ + +++
  EPX73278.1 246 PLKSFDS--SVTACCWLDISKF 265
                 4444443..4999987666655 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.5
                 EEEETTSSEEEEEETTSEE CS
        WD40  16 lafspdgawlasGsdDgtv 34 
                 l+ +p+g ++++++ D  +
  EPX73278.1 304 LSSHPSGEYVVAAT-DAAC 321
                 5689*****99888.7655 PP

  == domain 3  score: 9.8 bits;  conditional E-value: 0.00066
                 S..SSEEEEEEETTSSEEEEEETTSEEE CS
        WD40  10 H..ssvtslafspdgawlasGsdDgtvr 35 
                    + +t+l+f+pdg+ +a G ++g + 
  EPX73278.1 334 NisNTITALSFHPDGHIFAVGKKNGEIE 361
                 55345*************9997787776 PP

  == domain 4  score: 2.6 bits;  conditional E-value: 0.13
                 SSEEEEEEETTSSEEEEE CS
        WD40  11 ssvtslafspdgawlasG 28 
                 +s+ sl+f  +g wla+ 
  EPX73278.1 379 GSIQSLQFGENGYWLAAT 396
                 3599***********853 PP

  == domain 5  score: 3.7 bits;  conditional E-value: 0.055
                 EEEEEEETTSSEEEEEETTSEEEE CS
        WD40  13 vtslafspdgawlasGsdDgtvri 36 
                  t++        l+++sdD+ ++i
  EPX73278.1 430 LTCQ--------LLASSDDKYLYI 445
                 5888........888999**9987 PP

>> U-box  U-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0     1e-06    0.0023       7      56 ..       3      52 ..       1      56 [. 0.89

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 1e-06
                -TTT-SB-SSEEEET.TTEEEEHHHHHHHHTT.SSB-TTT-SB--GGGSEE CS
       U-box  7 dpitlelmkdPvilp.sgvvvdrstiekhllsrdktdPftrepltqdqlip 56
                ++i+ e  k+Pv++  sg +++r  ie+ +++ ++ dP+t++  + d+l+p
  EPX73278.1  3 CSISGETPKEPVVSRvSGNIYERRLIEQAINE-TSKDPVTQQECSLDDLVP 52
                8889999999**986266**************.**************9998 PP

>> Frtz  WD repeat-containing and planar cell polarity effector protein Fritz
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   2.6e-06    0.0059     255     329 ..     293     366 ..     272     374 .. 0.89

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 2.6e-06
        Frtz 255 siPlraqvislafnpdedkLllGceDssviLydeerkitklvkaevvPsliswhpdsaillvasergelqifDla 329
                 siP++ +  ++  ++     ++ + D + iLy  +  +   v++  + + +s+hpd+ i+ v++++ge+  f+ a
  EPX73278.1 293 SIPVENENLMFLSSHPSGEYVVAATDAACILYSMKEAVYS-VNISNTITALSFHPDGHIFAVGKKNGEIEFFETA 366
                 799999999999999999**************99888766.5666677899*********************987 PP

>> BBS2_Mid  Ciliary BBSome complex subunit 2, middle region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00014      0.32      13      67 ..     310     365 ..     301     369 .. 0.85
   2 ?    1.6   0.0      0.12   2.7e+02      63     105 ..     446     487 ..     429     490 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00014
    BBS2_Mid  13 neLvvgsddfeirvfkeeelvaeitetekvvslarleker.fayaleNGtvgvyek 67 
                  e vv+++d    +++ +e+v  +++++ +++l+   + + fa++ +NG +  +e 
  EPX73278.1 310 GEYVVAATDAACILYSMKEAVYSVNISNTITALSFHPDGHiFAVGKKNGEIEFFET 365
                 5779999999999********************86555444**********99986 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.12
    BBS2_Mid  63 gvyekkerlWrvksknevvalaaydingdgtkelivgwsnGkl 105
                   y k+ + W+  sk e+  + +    + + ++l+   ++G +
  EPX73278.1 446 HSYVKASKSWNLVSKVEASLISNLAWME-DPHKLVYCTNQGSV 487
                 5688888999999988887777666663.55566666666655 PP

>> zf-Nse  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   5.9e-05      0.13      14      50 ..       3      37 ..       1      46 [. 0.83

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 5.9e-05
                -TTTSSB-SSEEEESSS--EEEHHHHHHHCTTTS-EE CS
      zf-Nse 14 CPltlqpfeePvtskkCpHvFEreaIlelikrkktvk 50
                C ++ ++ +ePv s+    ++Er+ I++ i  ++t k
  EPX73278.1  3 CSISGETPKEPVVSRVSGNIYERRLIEQAI--NETSK 37
                99****************************..33333 PP

>> DUF1635  Protein of unknown function (DUF1635)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   4.1   0.00014      0.31      10     132 ..      83     202 ..      76     217 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00014
     DUF1635  10 LlyttleLettklkaqeelrkrdeeviqLkdlLkktikErdeAqeklqkllleklllqqqqqqneesaslsgassiederrasnnsfsssdleesivss 108
                 L    ++L +   + ++el +    +     ++++ +kErdeA+e l k+  +   + q   +++++  +      ed     ++ +  s +e +++++
  EPX73278.1  83 LALEQFDLRKKLSETKQELSTSLYSLDAAFRVISRLTKERDEAREALAKFSDNISSISQPTADRAANHDIEMKDNNED-----TKTTLNSTVERTLTQL 176
                 55566777777777888888888888888899******************9888878777777777777775444444.....4555556666655554 PP

     DUF1635 109 e..vidptpqqqekppelldelvkdK 132
                 +   ++ + q++  +pe+l++lv+  
  EPX73278.1 177 SskRKQTKLQPTWATPEVLNQLVHSS 202
                 41033333333334789999998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (494 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1079  (0.0601818); expected 358.6 (0.02)
Passed bias filter:                      682  (0.0380389); expected 358.6 (0.02)
Passed Vit filter:                        77  (0.00429472); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.65u 0.26s 00:00:00.91 Elapsed: 00:00:00.46
# Mc/sec: 3210.36
//
Query:       EPX73279.1  [L=209]
Description: rRNA processing protein Rrp17 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.8e-27   94.3  25.6    8.8e-27   94.3  25.6    2.2  2  Nop25     Nucleolar protein 12 (25kDa)
     0.0054   16.9   2.0     0.0089   16.2   2.0    1.4  1  DUF3333   Domain of unknown function (DUF3333)
  ------ inclusion threshold ------
        3.4    8.0  14.1       0.33   11.3   5.4    2.8  3  Mrpl_C    54S ribosomal protein L8 C-terminal domain


Domain annotation for each model (and alignments):
>> Nop25  Nucleolar protein 12 (25kDa)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.3  25.6   1.5e-30   8.8e-27       1     112 [.      16     140 ..      16     161 .. 0.67
   2 ?   -5.5  10.8         3   1.8e+04      44      75 ..     173     205 ..     170     209 .] 0.52

  Alignments for each domain:
  == domain 1  score: 94.3 bits;  conditional E-value: 1.5e-30
       Nop25   1 kkkakkkkveevtFDkdsRkeYLTGFhKRKlqRqkkAqeeakeqereerieeRkklreerkkeleeqleevketlkeseeeeeeeeeeeeee......e 93 
                 kk+ +k++ ee++FDk++R+e+LTGFhKRK++Rqk+Aq  a++q+re+++++Rk +r++rk++l+e++e+ +++l +++++++e+e ++++       +
  EPX73279.1  16 KKRGRKQRQEEIVFDKAQRQEFLTGFHKRKVERQKHAQAVAEKQQREDKRQMRKMIRQQRKQQLQERIEASRKLLGAEDTSNSEDE-DSDNVtaetedK 113
                 5778899*********************************************************************9322222222.222222222221 PP

       Nop25  94 eeeeeeeeeewegfedee........e 112
                    e+++e      e+++        e
  EPX73279.1 114 VVIENDDEPRTREYEEDDkhvsviiqE 140
                 111222222222222222344444431 PP

  == domain 2  score: -5.5 bits;  conditional E-value: 3
       Nop25  44 qereerieeRkklreerk.keleeqleevketl 75 
                 ++++++ + R + +eer+ +e +++++++k+++
  EPX73279.1 173 KQKQKKNRFRYESKEERRmSERKSKIKKLKHAV 205
                 455666666666666554134444555555544 PP

>> DUF3333  Domain of unknown function (DUF3333)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   2.0   1.5e-06    0.0089      73     129 ..      39      95 ..      18     113 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.5e-06
     DUF3333  73 atanyeklirdalkaklpeveerrekrelaelissgaayqlrdrvladpsligttvt 129
                 + +  +k+ r++ ++++ e ++r++kr+++++i ++ + ql++r+ a ++l+g + t
  EPX73279.1  39 TGFHKRKVERQKHAQAVAEKQQREDKRQMRKMIRQQRKQQLQERIEASRKLLGAEDT 95 
                 445555666778888888889********************************8765 PP

>> Mrpl_C  54S ribosomal protein L8 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   1.0     0.068   4.1e+02      68      97 ..      24      54 ..      17      67 .. 0.61
   2 ?   11.3   5.4   5.4e-05      0.33      40      97 ..      65     122 ..      52     136 .. 0.77
   3 ?   -0.4   0.1      0.23   1.4e+03      64     109 ..     137     188 ..     121     190 .. 0.50

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.068
      Mrpl_C 68 eqelewdeeeekeavkalld.qvakktlpkk 97
                ++e  +d+++ +e+++   + +v ++++ ++
  EPX73279.1 24 QEEIVFDKAQRQEFLTGFHKrKVERQKHAQA 54
                4455699999999999876515533333332 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 5.4e-05
      Mrpl_C  40 qnLkKmlkfkskeqllkeilavrkflkeeqelewdeeeekeavkalldqvakktlpkk 97 
                 + ++Km+++++k+ql++ i a rk+l  e+ ++ ++e  ++++++  d+v+ ++  + 
  EPX73279.1  65 RQMRKMIRQQRKQQLQERIEASRKLLGAEDTSNSEDEDSDNVTAETEDKVVIENDDEP 122
                 6799***********************9999997777778888888888844443333 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.23
      Mrpl_C  64 flkeeqele.wdeeeekeavkalldqv.....akktlpkkkkkesgYkfvee 109
                 +++e+++ +  +eee ++ +++ ++       ++ +++k+kk++  Y+  ee
  EPX73279.1 137 IIQEDDGEQsQNEEELADGIHTPQTDPppsvpIRPHKQKQKKNRFRYESKEE 188
                 4555554443333333333433333323333445555556666666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3687  (0.205644); expected 358.6 (0.02)
Passed bias filter:                      668  (0.0372581); expected 358.6 (0.02)
Passed Vit filter:                        84  (0.00468515); expected 17.9 (0.001)
Passed Fwd filter:                        21  (0.00117129); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.67u 0.35s 00:00:01.02 Elapsed: 00:00:00.47
# Mc/sec: 1332.88
//
Query:       EPX73280.1  [L=137]
Description: mediator complex subunit Srb6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-16   60.9   0.8    1.6e-16   60.4   0.8    1.2  1  Med22     Surfeit locus protein 5 subunit 22 of Mediator comp


Domain annotation for each model (and alignments):
>> Med22  Surfeit locus protein 5 subunit 22 of Mediator complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.4   0.8   8.9e-21   1.6e-16       3      95 ..      21     110 ..      19     118 .. 0.87

  Alignments for each domain:
  == domain 1  score: 60.4 bits;  conditional E-value: 8.9e-21
       Med22   3 ldddveslldnfreliklakvndekqkekstaaqeslemevraaqlvraiedLlkLtrelKelwiLndfpelneeikdqeeeldeeneelsql 95 
                 +d  +++ll++f+++  +a  +  k k   ++++e++++e+++ +++ra+e+Ll ++r+lK +w++n  +++  + + +e++ld  ++++++l
  EPX73280.1  21 IDGATQTLLSRFQDIADIAMNQ-GKDK--NIVSSEVYQIECHTLSMIRAVEQLLDISRQLKSFWLCNSSSTTVPSLDFNETNLDLLKSKMTSL 110
                 67889***************54.3333..367*********************************************9999999977776663 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       492  (0.0274416); expected 358.6 (0.02)
Passed bias filter:                      300  (0.0167327); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.27s 00:00:00.69 Elapsed: 00:00:00.44
# Mc/sec: 929.17
//
Query:       EPX73281.1  [L=359]
Description: hypothetical protein SOCG_01034 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.1e-27   95.0  19.4    3.1e-27   95.0  19.4    3.3  3  DUF2040   Coiled-coil domain-containing protein 55 (DUF2040)


Domain annotation for each model (and alignments):
>> DUF2040  Coiled-coil domain-containing protein 55 (DUF2040)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.0  19.4   1.7e-31   3.1e-27       4     117 ..      57     168 ..      54     172 .. 0.91
   2 ?   -2.0   0.2      0.19   3.4e+03      63      63 ..     194     194 ..     177     240 .. 0.57
   3 ?   -9.1  19.0         1   1.8e+04      51      85 ..     292     327 ..     263     358 .. 0.52

  Alignments for each domain:
  == domain 1  score: 95.0 bits;  conditional E-value: 1.7e-31
     DUF2040   4 eaekaleeDpsvydYDevYDslkeakekkkakkkeekkerkpkYienLlkaaekRkrereraeerklqkereaegdefadkekFVTsaYkkkleelkkl 102
                 e ++ +e+D+svy YDe YDs+k+ ++++++ +++e++er+pkY+e+L+++a++Rkr+  +a+er lqk+re egd  ++ ekFVT +Yk + ee++k+
  EPX73281.1  57 ERNETTESDASVYGYDEYYDSMKSGEREQQELRRQEAQERRPKYMEKLIESAKTRKRDMLIARERALQKQRESEGD--DGSEKFVTGSYKLHREEMEKE 153
                 678899*************************999999***************************************..78899*************999 PP

     DUF2040 103 eeeekrreeeeekkd 117
                  e++kr+eee e+k+
  EPX73281.1 154 IEDRKREEEELEAKN 168
                 888888877766655 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.19
     DUF2040  63 e 63 
                 +
  EPX73281.1 194 R 194
                 1 PP

  == domain 3  score: -9.1 bits;  conditional E-value: 1
     DUF2040  51 LlkaaekRkrereraeerklqkereaegd.efadke 85 
                 + + +++ +++r+  ee++l+k++e+e++ efa k 
  EPX73281.1 292 VYSLKQVEEQKRKYQEEQNLKKQKEEEKKkEFALKT 327
                 444445555555555566666666555544555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (359 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2464  (0.137431); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.74u 0.30s 00:00:01.04 Elapsed: 00:00:00.47
# Mc/sec: 2285.32
//
Query:       EPX73282.1  [L=143]
Description: myosin I light chain Cam2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      3e-15   56.4   0.4    3.4e-08   33.8   0.0    2.2  2  EF-hand_7  EF-hand domain pair
    3.3e-15   54.4   0.0    9.9e-05   21.6   0.1    3.5  3  EF-hand_1  EF hand
    9.6e-13   47.0   0.0    0.00016   21.3   0.0    3.5  3  EF-hand_6  EF-hand domain
    8.2e-11   41.6   1.7    0.00021   21.1   0.0    3.4  3  EF-hand_8  EF-hand domain pair
      2e-10   40.8   0.0     0.0002   21.6   0.0    2.1  2  EF-hand_9  EF-hand domain
    0.00034   20.0   0.2       0.25   10.9   0.0    2.7  2  EF-hand_5  EF hand
  ------ inclusion threshold ------
      0.049   13.9   0.0          8    6.8   0.0    2.2  2  DUF2267    Uncharacterized conserved protein (DUF2267)


Domain annotation for each model (and alignments):
>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.1   1.2e-07   0.00031       3      53 ..      10      54 ..       8      70 .. 0.89
   2 !   33.8   0.0   1.3e-11   3.4e-08       6      69 ..      82     139 ..      77     141 .. 0.92

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 1.2e-07
   EF-hand_7  3 klkeaFkelDtdgdgyldkeellrllrkifqgagegsklsdeelellfkef 53
                ++keaF ++D d+dg +  + + ++lr      + g+++sd el +l+ e+
  EPX73282.1 10 EMKEAFTLYDIDRDGLIPSSHVGSVLR------SLGVNVSDAELTKLSSEL 54
                799************************......9***********999887 PP

  == domain 2  score: 33.8 bits;  conditional E-value: 1.3e-11
   EF-hand_7   6 eaFkelDtdgdgyldkeellrllrkifqgagegsklsdeelellfkefDtdkdGvisfdEFlkl 69 
                  aF  +D d++gy++ + + +++         g+kl+++e++l+++e D +++G+ ++ EF++ 
  EPX73282.1  82 KAFTVFDADNSGYIETAKFAEYMM------TLGEKLPEHEVQLMVQEADPTNSGSFNYHEFVQR 139
                 68******************9999......899****************************986 PP

>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   1.2e-06     0.003       1      28 [.      10      37 ..      10      38 .. 0.84
   2 !   21.6   0.1   3.9e-08   9.9e-05       1      28 [.      79     106 ..      79     107 .. 0.93
   3 !   12.1   0.0   4.4e-05      0.11       1      26 [.     115     140 ..     115     143 .] 0.87

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 1.2e-06
                HHHHHHHHHTTTSSSEEEHHHHHHHHHH CS
   EF-hand_1  1 elkeiFrefDkDgdGkIdfeEfkellkk 28
                e+ke+F ++D D+dG I  +   ++l++
  EPX73282.1 10 EMKEAFTLYDIDRDGLIPSSHVGSVLRS 37
                789*************987777777665 PP

  == domain 2  score: 21.6 bits;  conditional E-value: 3.9e-08
                 HHHHHHHHHTTTSSSEEEHHHHHHHHHH CS
   EF-hand_1   1 elkeiFrefDkDgdGkIdfeEfkellkk 28 
                 e+ ++F +fD D++G+I+   f e++++
  EPX73282.1  79 EFVKAFTVFDADNSGYIETAKFAEYMMT 106
                 6889*********************987 PP

  == domain 3  score: 12.1 bits;  conditional E-value: 4.4e-05
                 HHHHHHHHHTTTSSSEEEHHHHHHHH CS
   EF-hand_1   1 elkeiFrefDkDgdGkIdfeEfkell 26 
                 e++ + +e+D  ++G  ++ Ef++ +
  EPX73282.1 115 EVQLMVQEADPTNSGSFNYHEFVQRI 140
                 577799****************9865 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.0   6.2e-08   0.00016       1      31 []      10      39 ..      10      39 .. 0.96
   2 !   18.7   0.0   4.5e-07    0.0011       1      27 [.      79     105 ..      79     112 .. 0.87
   3 ?    3.0   0.0     0.048   1.2e+02       8      24 ..     122     138 ..     115     143 .] 0.81

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 6.2e-08
   EF-hand_6  1 elreaFklfDkdgdGkidaeElrkalrkalg 31
                e++eaF l+D d+dG i  + + ++lr +lg
  EPX73282.1 10 EMKEAFTLYDIDRDGLIPSSHVGSVLR-SLG 39
                79*************************.887 PP

  == domain 2  score: 18.7 bits;  conditional E-value: 4.5e-07
   EF-hand_6   1 elreaFklfDkdgdGkidaeElrkalr 27 
                 e+ +aF  fD d++G+i ++ +   + 
  EPX73282.1  79 EFVKAFTVFDADNSGYIETAKFAEYMM 105
                 6899**************999988776 PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.048
   EF-hand_6   8 lfDkdgdGkidaeElrk 24 
                 + D +++G+ +++E+++
  EPX73282.1 122 EADPTNSGSFNYHEFVQ 138
                 56999**********76 PP

>> EF-hand_8  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0      0.03        76      26      43 ..       9      26 ..       4      27 .. 0.85
   2 !   16.8   0.6   1.7e-06    0.0044       5      52 ..      58     104 ..      55     106 .. 0.80
   3 !   21.1   0.0   8.1e-08   0.00021       6      50 ..      96     138 ..      95     140 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.03
   EF-hand_8 26 eevdilfrefDtdgdGki 43
                +e+ + f + D+d+dG i
  EPX73282.1  9 DEMKEAFTLYDIDRDGLI 26
                5677789999******87 PP

  == domain 2  score: 16.8 bits;  conditional E-value: 1.7e-06
   EF-hand_8   5 Itreelrril.rilglkkglseeevdilfrefDtdgdGkisfeEFcvll 52 
                 I+  +++ ++  +l      seee+   f  fD d++G+i    F +++
  EPX73282.1  58 IDEKKFMNFAkFKLNET--ESEEEFVKAFTVFDADNSGYIETAKFAEYM 104
                 77777777664444444..79999****************999999987 PP

  == domain 3  score: 21.1 bits;  conditional E-value: 8.1e-08
   EF-hand_8   6 treelrrilrilglkkglseeevdilfrefDtdgdGkisfeEFcv 50 
                  ++++ + + +lg k  l e+ev+ ++ e+D  ++G  ++ EF++
  EPX73282.1  96 ETAKFAEYMMTLGEK--LPEHEVQLMVQEADPTNSGSFNYHEFVQ 138
                 566777777677999..**************************97 PP

>> EF-hand_9  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   1.6e-06    0.0041       3      55 ..      14      66 ..      12      71 .. 0.83
   2 !   21.6   0.0   7.6e-08    0.0002       3      63 ..      83     141 ..      82     143 .] 0.89

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 1.6e-06
   EF-hand_9  3 vFevcDtqktGrVpvsrlidyLravtaqdpeeseLeelakel.DPdgedasvdl 55
                 F ++D+++ G +p s++ ++Lr  +  + +++eL +l++el D  +e++ +++
  EPX73282.1 14 AFTLYDIDRDGLIPSSHVGSVLRSLGV-NVSDAELTKLSSELgDAIDEKKFMNF 66
                69*************************.999*******9998455555555555 PP

  == domain 2  score: 21.6 bits;  conditional E-value: 7.6e-08
   EF-hand_9   3 vFevcDtqktGrVpvsrlidyLravtaqdpeeseLeelakelDPdgedasvdldtflrvmr 63 
                  F v+D +  G +  ++  +y+   ++ + +e+e++   +e+DP +  +s +   f + ++
  EPX73282.1  83 AFTVFDADNSGYIETAKFAEYMMTLGE-KLPEHEVQLMVQEADPTNS-GSFNYHEFVQRIM 141
                 59************************9.8889***************.9999988864433 PP

>> EF-hand_5  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4   0.0    0.0026       6.6       2      16 ..      12      26 ..      11      26 .. 0.86
   2 !   10.9   0.0   9.8e-05      0.25       2      17 ..      81      96 ..      80      98 .. 0.87

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0026
                HHHHHHH-SS-SSCE CS
   EF-hand_5  2 kdtFqaiDlNgDGkI 16
                k++F   D ++DG I
  EPX73282.1 12 KEAFTLYDIDRDGLI 26
                678999*******87 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 9.8e-05
                HHHHHHH-SS-SSCE- CS
   EF-hand_5  2 kdtFqaiDlNgDGkIs 17
                +++F  +D++++G+I 
  EPX73282.1 81 VKAFTVFDADNSGYIE 96
                567***********95 PP

>> DUF2267  Uncharacterized conserved protein (DUF2267)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0    0.0093        24      87     120 ..      24      59 ..       4      61 .. 0.79
   2 ?    6.8   0.0    0.0031         8      42      78 ..     106     141 ..     101     143 .] 0.85

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.0093
                 E..HHHHHHHHHHHHHHHS-HHHHHHHHHTS-HHHH CS
     DUF2267  87 d..aeqaaraVfaalkealsegeiedvaaqLPkdlr 120
                    +  ++  V++ l   +s++e++++ ++L + + 
  EPX73282.1  24 GliPSSHVGSVLRSLGVNVSDAELTKLSSELGDAID 59 
                 366788999999999999999999999999998876 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0031
                 HHHTTS-HHHHHHHHTT--TTS---.--SHHHHHHHHH CS
     DUF2267  42 dlaaqLPeelrgllrdgwppvepgk.rfdreeflerva 78 
                  l ++LPe+  +l+ ++ +p  +   +f+  ef++r+ 
  EPX73282.1 106 TLGEKLPEHEVQLMVQEADP--TNSgSFNYHEFVQRIM 141
                 58899**9999999999999..56667*********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       580  (0.0323498); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 1000.66
//
Query:       EPX73283.1  [L=484]
Description: pseudouridylate synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.8e-31  107.4   0.1    1.6e-30  104.9   0.1    2.1  2  DKCLD           DKCLD (NUC011) domain
    2.3e-23   82.1   0.6    4.3e-23   81.2   0.6    1.5  1  TruB_C_2        tRNA pseudouridylate synthase B C-terminal do
      2e-22   78.9   1.8    3.9e-22   78.0   1.8    1.5  1  PUA             PUA domain
    3.2e-19   69.8   7.3    2.6e-18   66.8   0.1    3.7  2  TruB_N          TruB family pseudouridylate synthase (N termi
    0.00043   20.5   0.1     0.0012   19.1   0.1    1.8  1  UPF0113         UPF0113 PUA domain
  ------ inclusion threshold ------
        0.2   10.4   7.0       0.24   10.1   7.0    1.1  1  SAPS            SIT4 phosphatase-associated protein
       0.52   10.6  11.9       0.77   10.0  11.9    1.4  1  GAGA_bind       GAGA binding protein-like family
        1.2    9.2   5.1        1.8    8.6   5.1    1.3  1  DDHD            DDHD domain
        4.2    7.3  32.7        8.6    6.3  32.7    1.5  1  Med19           Mediator of RNA pol II transcription subunit 
        5.1    5.8  18.4        7.5    5.2  18.4    1.4  1  Tim54           Inner membrane protein import complex subunit


Domain annotation for each model (and alignments):
>> DKCLD  DKCLD (NUC011) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.9   0.1   9.1e-34   1.6e-30       1      58 []      24      81 ..      24      81 .. 0.98
   2 ?   -0.7   0.0      0.85   1.5e+03       4      28 ..     264     288 ..     262     289 .. 0.86

  Alignments for each domain:
  == domain 1  score: 104.9 bits;  conditional E-value: 9.1e-34
                XXXXX....XXX-EEESS-----TTSS--GGG--HHHHHHTEEEEEEE-SSS-HHHHH CS
       DKCLD  1 tsewpllLknydkllvrtehytplpaGssPlkRpieeyikyGvinLDKPsnPsSHEVV 58
                t+ewpllLkn+dkllvrt+hytp+p+Gs+PlkRpi +y+++Gv+nLDKP+nPsSHEVV
  EPX73283.1 24 TEEWPLLLKNFDKLLVRTGHYTPIPCGSNPLKRPIADYVSSGVMNLDKPANPSSHEVV 81
                579******************************************************9 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.85
                 XX....XXX-EEESS-----TTSS- CS
       DKCLD   4 wpllLknydkllvrtehytplpaGs 28 
                 ++ lL  y++++v+ ++ + + +G 
  EPX73283.1 264 LESLLVGYKRVVVKDSAVNAVCYGA 288
                 5679999*********999999885 PP

>> TruB_C_2  tRNA pseudouridylate synthase B C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.2   0.6   2.4e-26   4.3e-23       1      63 [.     202     268 ..     202     269 .. 0.96

  Alignments for each domain:
  == domain 1  score: 81.2 bits;  conditional E-value: 2.4e-26
                 HHHHHHHHHHTTS-EEEEEEEEEEETTE.GG-..B-HHHHHHHHHHHHT..--H.HHHHEEEGGGGG CS
    TruB_C_2   1 RtLcdDiGeaLgcgAhveeLRRtrvgpf.deedmvtledLedavllyke..dee.LdrlllPlesal 63 
                 RtLc ++G++Lg+gAh++eLRR+r+g + +++d+vt++d+ da+++y++  de+ L+r+++Ples+l
  EPX73283.1 202 RTLCVHLGLLLGVGAHMQELRRVRSGCLsENDDIVTMHDILDAQWVYDNtrDESyLRRVIRPLESLL 268
                 9***************************99999****************97777***********97 PP

>> PUA  PUA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.0   1.8   2.2e-25   3.9e-22       1      73 [.     272     344 ..     272     345 .. 0.98

  Alignments for each domain:
  == domain 1  score: 78.0 bits;  conditional E-value: 2.2e-25
                 CEEEE-HHHHHHHHTT-EEEGGGEEEEETT--TTSEEEEEETTSCEEEEEEESS-HHHHHHHCTSEEEEEEEE CS
         PUA   1 grvvvddgAvkallsgasLlapGvvevegdfeegdvVaivdedgelvavGlanysseelakikggksveierv 73 
                 +rvvv+d+Av+a+++ga+L++pG++++e  +e +d+V++++++ge++avG+a++s+ el ++++g++++++r+
  EPX73283.1 272 KRVVVKDSAVNAVCYGAKLMIPGLLRYESGIEVNDEVVLMTTKGEAIAVGIAQMSTVELSTCDHGVVAKVKRC 344
                 69********************************************************************997 PP

>> TruB_N  TruB family pseudouridylate synthase (N terminal domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.8   0.1   1.4e-21   2.6e-18       1     149 []      85     201 ..      85     201 .. 0.89
   2 ?   -5.5   3.4        10   1.8e+04      53      70 ..     437     454 ..     428     475 .. 0.54

  Alignments for each domain:
  == domain 1  score: 66.8 bits;  conditional E-value: 1.4e-21
                 HHHTT-S-EEESS---TT-EEEEEEEEGGGGGGHHHCTTS-EEEEEEEEETEEETTSBTTS-EEE-.--TT--HHHHHHHHHHC-EEE----------- CS
      TruB_N   1 krllkakkvGhtGtLDplatGvLvvavgeaTklleylleadKeYeatirlgaetdteDaegeileeekveklteekleevlkkftGeieqvppmySAvk 99 
                 k++l+++k Gh+GtLDp++tG+L+++ ++aT+l+++ ++a KeY++ +rl+ + ++e                 +kl + ++++tG++ q+pp +SAvk
  EPX73283.1  85 KKILRVEKTGHSGTLDPKVTGCLIICNDRATRLVKSQQSAGKEYVCILRLHDAIENE-----------------RKLASSIETLTGALFQRPPLISAVK 166
                 899***********************************************9876654.................46888999***************** PP

                 ----------------------EEEEEEEEEEEEEE..EEEEEEEESTTTTH CS
      TruB_N 100 vnGkrlyelaregeeverkkrkvtiyelelleveep..evelevecskGtYi 149
                                  r+ r  +iye +l+e++++   + + ++c++GtY+
  EPX73283.1 167 -----------------RQLRIRSIYESKLIEFDQDrnLAIFWASCEAGTYM 201
                 .................77888888888888887776677788888888885 PP

  == domain 2  score: -5.5 bits;  conditional E-value: 10
                 EETTSBTTS-EEE-.--T CS
      TruB_N  53 etdteDaegeileeekve 70 
                 +t++eD+e    ee++ +
  EPX73283.1 437 KTESEDEEAAKKEEKRRK 454
                 555666555555442111 PP

>> UPF0113  UPF0113 PUA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.1   6.7e-07    0.0012       2      56 ..     274     329 ..     273     346 .. 0.89

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 6.7e-07
     UPF0113   2 vvvkekaeklFLYGrdvlkesilkitesvkenqvvvVlnengeplGiGkirkdt.k 56 
                 vvvk +a + + YG +++  ++l+++++++ n+ vv++ ++ge++++G+++ +t +
  EPX73283.1 274 VVVKDSAVNAVCYGAKLMIPGLLRYESGIEVNDEVVLMTTKGEAIAVGIAQMSTvE 329
                 89************************************************998863 PP

>> SAPS  SIT4 phosphatase-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   7.0   0.00014      0.24     272     339 ..     388     479 ..     315     484 .] 0.55

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00014
        SAPS 272 s....................................deaskeesaesedltdkdedvsleesksakdenkesdesesdtaeesseededdasseesal 334
                 s                                    d+++k+es+++ +++++de+ +++e+k+ k+            +e++++++++++++e++ +
  EPX73283.1 388 SksyvdyndpnapvptpavaptpvpetvpehapaveaDAEKKDESTKKRKTESEDEEAAKKEEKRRKK------------EEKKEKKEKKEDKKEKKEK 474
                 14444444666666666666666664444444444444455555555555555555554444444444............3322222222222222222 PP

        SAPS 335 aeete 339
                 ++++e
  EPX73283.1 475 KDKKE 479
                 22222 PP

>> GAGA_bind  GAGA binding protein-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0  11.9   0.00043      0.77     114     174 ..     424     478 ..     319     484 .] 0.57

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00043
   GAGA_bind 114 aeapelekeevasselveesavveke.eaakkrqqgkrpkepkakkakkaarkpkeegedla 174
                 a+  + +k+e       ++ ++ +++ eaakk ++++++ e+k kk kk+ +k k+e++d++
  EPX73283.1 424 AD--AEKKDE-----STKKRKTESEDeEAAKKEEKRRKKEEKKEKKEKKEDKKEKKEKKDKK 478
                 11..111222.....22222222222133333333222222333444443333333333221 PP

>> DDHD  DDHD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   5.1     0.001       1.8     126     167 ..     432     473 ..     340     484 .] 0.51

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.001
        DDHD 126 esaslaessksherasesskasqeskaaesstasssaksska 167
                 ++++ + +s+++e+a++++k++++++++e++++++++k++k+
  EPX73283.1 432 STKKRKTESEDEEAAKKEEKRRKKEEKKEKKEKKEDKKEKKE 473
                 222221111111111111111111111111111111111111 PP

>> Med19  Mediator of RNA pol II transcription subunit 19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3  32.7    0.0048       8.6      94     167 ..     408     482 ..     405     484 .] 0.64

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0048
       Med19  94 aGPlpeqyrll..kkqePkkknkekhkkskvkdakseetlsdseteegfekkhkkkkkedDkerkkkkkekkkkkk 167
                 + P+pe +      ++  + k+ e  kk+k++ + +e + ++++  +  ekk+kk+k ++Dk+ kk+kk+kk+kkk
  EPX73283.1 408 PTPVPETVPEHapAVEADAEKKDESTKKRKTESEDEEAAKKEEKRRKKEEKKEKKEK-KEDKKEKKEKKDKKEKKK 482
                 667777765432333333444455566666666666677777777777788888877.667777888888888886 PP

>> Tim54  Inner membrane protein import complex subunit Tim54
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2  18.4    0.0042       7.5     195     244 ..     427     476 ..     361     484 .] 0.54

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.0042
       Tim54 195 epeeeeaeeeeeeeeeekeeeeeeeeeeeeekeeekeeekeeeeeeeeke 244
                 e++ e+++++++e+e+e+++++ee+++++eek+e+ke++++++e++e+k+
  EPX73283.1 427 EKKDESTKKRKTESEDEEAAKKEEKRRKKEEKKEKKEKKEDKKEKKEKKD 476
                 11111111111111111111111111111111111111111111111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (484 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2753  (0.15355); expected 358.6 (0.02)
Passed bias filter:                      981  (0.0547158); expected 358.6 (0.02)
Passed Vit filter:                       392  (0.021864); expected 17.9 (0.001)
Passed Fwd filter:                        63  (0.00351386); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 1.00u 0.35s 00:00:01.35 Elapsed: 00:00:00.51
# Mc/sec: 2854.34
//
Query:       EPX73284.1  [L=132]
Description: ribosomal protein subunit S9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.4e-40  137.3   0.5    3.9e-40  137.1   0.5    1.0  1  Ribosomal_S9  Ribosomal protein S9/S16
  ------ inclusion threshold ------
      0.032   14.6   0.4       0.28   11.6   0.4    2.1  1  Smr           Smr domain


Domain annotation for each model (and alignments):
>> Ribosomal_S9  Ribosomal protein S9/S16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.1   0.5   4.3e-44   3.9e-40       1     121 []      12     132 .]      12     132 .] 0.98

  Alignments for each domain:
  == domain 1  score: 137.1 bits;  conditional E-value: 4.3e-44
                   EECTTEEEEEEEEESSSEEEETTEECCHHSTTSCHHHHHCHHHHHTTTSSSEEEEEEEESS-HHHHHHHHHHHHHHHHHHHHHHH.HHHHCTCCCTS CS
  Ribosomal_S9   1 GrrKesvArvwikegkgkilvngksleeYfkeeaarekvleplkltgllgkfdvfvkvkgGGlsgqaeAirlgiaraLvalekee.kkeLkkagllt 96 
                   G+rK+s A+v+i++g+g++ vng +l++Yf++ a+r +++ pl +t++l+kf+v + v+gGG +gq++Ai+ +++raL   +    +  L++ag++ 
    EPX73284.1  12 GKRKSSKATVKIIQGNGQVFVNGIPLASYFQRLAHRRHAIYPLVATETLSKFNVWMVVHGGGPTGQSGAIHSAVSRALRIQNA-LlEGPLRQAGCVE 107
                   8******************************************************************************8877.55*********** PP

                   -B--------TTSSCTTB----S-- CS
  Ribosomal_S9  97 rDpRvvErkKtgkkkARkkyqwskR 121
                   +D+R+vErkKtg++kARkky+w+kR
    EPX73284.1 108 NDKRKVERKKTGQPKARKKYTWVKR 132
                   ************************9 PP

>> Smr  Smr domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.4   3.1e-05      0.28      23      58 ..      59      94 ..       8     121 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 3.1e-05
                HHTT-SEEEEE--STTSTTHCHHHHHHHHHHHCSTT CS
         Smr 23 sakglrsvevihGkGahagvgvLrpavmgwLagkea 58
                  ++++   v+hG G   + g++ +av + L+ ++a
  EPX73284.1 59 TLSKFNVWMVVHGGGPTGQSGAIHSAVSRALRIQNA 94
                3367999*********999**********9997755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       536  (0.0298957); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.28s 00:00:00.68 Elapsed: 00:00:00.43
# Mc/sec: 928.95
//
Query:       EPX73285.1  [L=400]
Description: translation elongation factor EF-1 gamma subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-43  146.6   0.0    4.5e-43  145.7   0.0    1.5  1  EF1G      Elongation factor 1 gamma, conserved domain
    6.2e-12   45.6   0.0    1.4e-11   44.5   0.0    1.6  1  GST_C     Glutathione S-transferase, C-terminal domain
    1.6e-09   38.0   0.0    3.4e-09   36.9   0.0    1.6  1  GST_N     Glutathione S-transferase, N-terminal domain
    2.2e-06   27.8   0.0    5.6e-06   26.5   0.0    1.7  1  GST_C_3   Glutathione S-transferase, C-terminal domain
    2.6e-06   27.4   0.0    6.5e-06   26.1   0.0    1.7  1  GST_C_2   Glutathione S-transferase, C-terminal domain
  ------ inclusion threshold ------
      0.018   14.1   0.6      0.029   13.4   0.6    1.3  1  DEC-1_N   DEC-1 protein, N-terminal region


Domain annotation for each model (and alignments):
>> EF1G  Elongation factor 1 gamma, conserved domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.7   0.0   1.5e-46   4.5e-43       1     107 []     241     348 ..     241     348 .. 0.99

  Alignments for each domain:
  == domain 1  score: 145.7 bits;  conditional E-value: 1.5e-46
        EF1G   1 kakdplaalpkskfvldewKrkYsnedteekalkyfwenfdkeeyslwkveYkyneeltk.tfmssnliggffqrleklrkyaFgsvvvfgennnseis 98 
                 k+k+plaalp+ +++l+e+Kr+Y+n+dt++ +l++f+e+fd+e+ys+wkv+Y y+e+l++ +fm++nliggffqrle++rk +Fg+++v+gen +++i+
  EPX73285.1 241 KPKHPLAALPNGELNLEEFKRVYTNQDTRSGSLPWFFEHFDPENYSVWKVDYAYPEDLKQaVFMTCNLIGGFFQRLEASRKFIFGCCLVIGENGDNTIT 339
                 79**********************************************************9************************************** PP

        EF1G  99 GvwlfrGqe 107
                 G+++++Gq+
  EPX73285.1 340 GAFVIKGQD 348
                 *******97 PP

>> GST_C  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.5   0.0   4.6e-15   1.4e-11      19      92 ..     120     194 ..      86     195 .. 0.86

  Alignments for each domain:
  == domain 1  score: 44.5 bits;  conditional E-value: 4.6e-15
                 HHHHHHHHHHHHHHHHHHHHHHHHHTSSSSSTTSSCHHHHHHHHHHHHHHHHTTTTT.TTTSHHHHHHHHHHHTS CS
       GST_C  19 kkeelvdealekvaevlsaleeelkkqdylvGdkltlADialvpilnwlqrlglafg.qekfpnlkawlerimar 92 
                  ++ + ++a+  va  l +l++ l++++ylvG++l+lAD+ +v  l ++ r++l  +  +k+p++++++ +++++
  EPX73285.1 120 YNANVEKQAQASVASELTRLNGLLADKTYLVGSRLSLADVFAVNSLSCVIRFVLTKSeLAKYPHVQRYYATMYHQ 194
                 55667799999*********************************************999*************876 PP

>> GST_N  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.9   0.0   1.2e-12   3.4e-09       2      75 ..       3      74 ..       2      75 .. 0.93

  Alignments for each domain:
  == domain 1  score: 36.9 bits;  conditional E-value: 1.2e-12
                EEEEESSSTSHTHHHHHHHHHHTT-EEEEEEECSTTTCGGCHHHHHHCTTS-SSEEEET.TEEEESHHHHHHHHH CS
       GST_N  2 vltlysirgsprahrirlllaakgveyevvpldfeageekspellklnplgkvPaLedn.gkkltESraIleYia 75
                v+t+y++  s r+ +++ ++aa+g+++   ++ f++++   ++l+ ++p +kvP+++++ g+ l ++ aI+ Y a
  EPX73285.1  3 VGTVYGNTLSFRVSAVLSAAAAAGIKVDNQDVAFGNFP---ADLAAKFPEKKVPVFVGQdGYLLSQAIAIAVYFA 74
                789*******************************6665...8*****************9***********9966 PP

>> GST_C_3  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.0   1.9e-09   5.6e-06      25      90 ..     128     195 ..      93     201 .. 0.85

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 1.9e-09
                 HHHHHHCHHHHHHHHHHCHGTSSSSTTS--HHHHHHHHHHHHHHHH....TCCCC-HHHHHHHHHHHTSH CS
     GST_C_3  25 leerlpkflkyfekvlkkkgggylvgdklTyADlalfqvldgleea....ealkkfpklkalyervearp 90 
                  +  +   l++++ +l+   ++ylvg++l++AD++ ++ l+ + ++    ++l+k+p+++++y+ +  + 
  EPX73285.1 128 AQASVASELTRLNGLLA--DKTYLVGSRLSLADVFAVNSLSCVIRFvltkSELAKYPHVQRYYATMYHQS 195
                 55667778999999999..889**********************999985444**********9997665 PP

>> GST_C_2  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.0   2.2e-09   6.5e-06       5      68 ..     126     189 ..     119     190 .. 0.86

  Alignments for each domain:
  == domain 1  score: 26.1 bits;  conditional E-value: 2.2e-09
                 CHHHHHCCHCHHHCTTT---SS.CTTCS--HHHHHHHH...HHHHHHHHHHS----TT-HHHHHHHH CS
     GST_C_2   5 eraleqldaaldaleahLadspflfGdqptlaDialap...flvrlraagpgfdireaypnlraWle 68 
                 ++a++ + + l  l+ +Lad+++l G++++laD+++     +++r+          ++yp+++++++
  EPX73285.1 126 KQAQASVASELTRLNGLLADKTYLVGSRLSLADVFAVNslsCVIRFVLTK---SELAKYPHVQRYYA 189
                 568899999***************************97555777777777...3357********96 PP

>> DEC-1_N  DEC-1 protein, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.6   9.8e-06     0.029      86     152 ..     172     249 ..     157     286 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 9.8e-06
     DEC-1_N  86 llppmdlg..pqvGaalqsllplqsldgllGaa........apapalaaapppapapvpddp.apapaapqaaafaff 152
                 +l+  +l   p+v    + +   ++ld+++Ga          p pa+  ap p  ap  ++p apapa  +  ++a++
  EPX73285.1 172 VLTKSELAkyPHVQRYYATMYHQSGLDSIIGALtfvekmpeIPKPAPKEAPKPKEAPKEQKPeAPAPAPKPKHPLAAL 249
                 55555665567888888888888999999997688899888999*************998888888887666666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (400 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       522  (0.0291148); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 2760.92
//
Query:       EPX73286.1  [L=569]
Description: apoptosis-inducing factor Aif1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      6e-52  176.7   0.3    7.5e-52  176.4   0.3    1.1  1  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
    1.1e-16   61.2   1.4    3.2e-11   43.6   0.2    3.3  2  Pyr_redox      Pyridine nucleotide-disulphide oxidoreductase
    1.8e-16   59.8   0.0    3.8e-16   58.8   0.0    1.5  1  Rieske         Rieske [2Fe-2S] domain
    5.3e-10   39.0   0.4    7.1e-05   22.2   0.0    2.2  2  Pyr_redox_3    Pyridine nucleotide-disulphide oxidoreductase
    3.3e-05   24.3   0.0    8.4e-05   23.1   0.0    1.7  1  Reductase_C    Reductase C-terminal
     0.0006   19.5   0.7         16    4.9   0.1    4.1  4  DAO            FAD dependent oxidoreductase
     0.0007   18.8   0.0        1.1    8.3   0.0    2.8  3  K_oxygenase    L-lysine 6-monooxygenase (NADPH-requiring)
     0.0018   18.4   0.2        0.1   12.8   0.1    2.6  2  NAD_binding_8  NAD(P)-binding Rossmann-like domain
     0.0025   17.7   0.0     0.0089   16.0   0.0    1.9  1  Rieske_2       Rieske-like [2Fe-2S] domain
     0.0025   17.0   0.1       0.12   11.5   0.0    2.8  3  FAD_binding_2  FAD binding domain
  ------ inclusion threshold ------
      0.015   15.3   0.0         13    5.8   0.0    3.2  3  NAD_binding_9  FAD-NAD(P)-binding
        0.1   11.3   0.0          1    8.0   0.0    2.2  2  HI0933_like    HI0933-like protein


Domain annotation for each model (and alignments):
>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  176.4   0.3     5e-55   7.5e-52       2     294 .]     158     461 ..     157     461 .. 0.90

  Alignments for each domain:
  == domain 1  score: 176.4 bits;  conditional E-value: 5e-55
                  SEEEE--SHHHHHHHHHHHH..HTS-EEEEETTHCHHHCSHHHHCHHHHHHHHHHHHH.....HHHHCHHHHCCCCHCCTCEEEEESCEEEEETEEEC CS
                  xxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2   2 dvvviGgGpAGlaaaltlaq..agakvtlvelegtclnggcllskallgvaedaeias.....evvkklnqgielllgeevvkidpgkkkvklekkke 92 
                  +v+++GgG ++  aa++l++  +++++t++ +e+ ++++++ lsk+l +  ++   +s     e    l  +ie++ +++v kidp+ k++ +     
   EPX73286.1 158 HVCIVGGGKGASVAAEYLRErnYKGRITVLTREDVTPYDRPKLSKTLMHDHSKIALRSkeyydE----L--DIEFRFKSNVNKIDPKTKTIYY----- 244
                  79******************88899**********************99999998888744432....3..599999999*************..... PP

                  TCEEEEEESEEEE---EEE-BCTCTTC.TTBEECCSECHHHHHHCCSS-T....SEEEEES-SHHHHHHHHHHHHHT-EEEEEESSSSSS.TTS-HHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxx RF
  Pyr_redox_2  93 gdeekiaydklvlAtGssprdlgipGvaenvgklvrtldsaealklkllp....krivvvGgGyiGvElAaalaklgkevtlveardrll.raldkel 185
                  gd+e++ y k++lAtG+++++l++pG+   +++ +r+l++  +l  + ++    k+iv++G+++iG+ElA+al++   +v +v   + +  + +++e+
   EPX73286.1 245 GDNESLNYSKVILATGGEANKLPLPGLDASNVYCLRSLADGTKLAAATNEsgqkKNIVIIGSSFIGLELAIALKDH--NVSIVGMDSAPFaKIMGEEM 340
                  9999***********************66666677****************************************9..56666666666668****** PP

                  HHHHHHHHHHTTEEEEESCEEEEEEETTE....EEEEEETTSCEEEESEEEE-S-EEES-HHCSHCCT-EEEETTEEE--TTSBES.STTEEE-GGGC CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxx RF
  Pyr_redox_2 186 saaleealekeGvevklgtsvkeidgnge....klevvledgeeidadlvvvavGvrpstelleeklglelderggivvdeflrtn.vpgiyaiGDva 278
                  ++a+++ +e++G +++l++s+ke+++         +vvl+dg+ ++a+ vv+avGv+p+ + +  ++ ++l+++gg++vd+++r++  +++ya+GD+a
   EPX73286.1 341 GNAIKALHEQNGTHFYLNNSIKEAKKSLGdssiVDKVVLKDGQILPAEVVVLAVGVKPNLSYI--ADHVQLEKDGGVKVDKNCRVQgLEDVYAVGDIA 436
                  ************************988777754444***********************9886..77788888************99*********** PP

                  .........TECCSS--HHHHHHHH CS
                  .........xxxxxxxxxxxxxxxx RF
  Pyr_redox_2 279 .........ggkggpelaqaAvqqG 294
                           +  +++e++ +A ++G
   EPX73286.1 437 hapyaglpeNVITRIEHWDVAGNTG 461
                  9999999888888999999988766 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.1   3.8e-05     0.056       1      71 [.     158     240 ..     158     245 .. 0.72
   2 !   43.6   0.2   2.1e-14   3.2e-11       1      80 [.     300     381 ..     300     382 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 3.8e-05
                 EEEEECSSHHHHHHHHHH..HHTTSEEEEEESSS.....SSS..TTSSHHHHHHH...HHHHHHTTEEEECSEEEEEEEEETT CS
   Pyr_redox   1 kvvvvGgGyiglElAgal..aelgkkVtvversd.....kll..rllDeeaskil...qeklekngievllntkveeiegsed 71 
                 +v +vGgG  +  +A++l  ++++ ++tv+ r+d     ++   + l ++ ski    +e+  ++ ie++++++v++i+ +++
  EPX73286.1 158 HVCIVGGGKGASVAAEYLreRNYKGRITVLTREDvtpydRPKlsKTLMHDHSKIAlrsKEYYDELDIEFRFKSNVNKIDPKTK 240
                 799***************55556689****99872222222233555555555544447888888999999999999998776 PP

  == domain 2  score: 43.6 bits;  conditional E-value: 2.1e-14
                 EEEEECSSHHHHHHHHHHHHTTSEEEEEESSSSSS.TTSSHHHHHHHHHHHHHTTEEEECSEEEEEEE...EETTS.EEEEEEET CS
   Pyr_redox   1 kvvvvGgGyiglElAgalaelgkkVtvversdkll.rllDeeaskilqeklekngievllntkveeie...gsedg.vesvklkd 80 
                 ++v++G+++iglElA al++++  V++v + + +  + ++ee++++++  +e+ng +++ln++++e +   g++   v +v+lkd
  EPX73286.1 300 NIVIIGSSFIGLELAIALKDHN--VSIVGMDSAPFaKIMGEEMGNAIKALHEQNGTHFYLNNSIKEAKkslGDS-SiVDKVVLKD 381
                 59******************99..********************************************553333.4578888776 PP

>> Rieske  Rieske [2Fe-2S] domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.8   0.0   2.6e-19   3.8e-16      11      89 .]      26     107 ..      19     107 .. 0.88

  Alignments for each domain:
  == domain 1  score: 58.8 bits;  conditional E-value: 2.6e-19
                 C-.TTCEEEEEETTEE..EEEEE-TTS-EEEEESC-TTTT-BCGGSEEETT.EEE-TTT--EEE.TTSBEEE-TTHHHEEEET CS
      Rieske  11 vp.egdpltvkvggep..lvvlrdedgevyAlsdvCtHrgaplsegkidekgvleCpcHgwayd.adGkvikgPaprplatyp 89 
                 v+ +g+ ++ kv+g++  ++++r  +++++A+ + C+H gapl +g+++++g+++Cp+Hg++++ a+G+v + Pa ++l+t+p
  EPX73286.1  26 VDrNGTKTEAKVLGTAfnVLLVR-AKNQYFATAGKCSHYGAPLVNGAVTSNGRIVCPWHGACFNsATGDVEDSPAISALRTFP 107
                 55578889999999983355566.4***********************9******************************9997 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.0   4.7e-08   7.1e-05     152     270 ..     144     264 ..     134     275 .. 0.78
   2 !   14.9   0.2   8.2e-06     0.012     163     305 .]     297     433 ..     285     433 .. 0.78

  Alignments for each domain:
  == domain 1  score: 22.2 bits;  conditional E-value: 4.7e-08
  Pyr_redox_3 152 hyskvkefhkyagqkvvViGgknSavDaAlelvrk..gaeVtvvtrgseiekeesdpsyslkpd...ienrleelvkeekikvlfnaevkeikekeee 244
                  +y k +  ++ +  +v+++Gg+  a  aA  l ++    ++tv+tr++    ++ + s +l  d   i  r +e+++e  i++ f+++v++i+ k+++
   EPX73286.1 144 VYEKGSVQNQASAPHVCIVGGGKGASVAAEYLRERnyKGRITVLTREDVTPYDRPKLSKTLMHDhskIALRSKEYYDELDIEFRFKSNVNKIDPKTKT 241
                  555555566778889*******999888877776644789********99999999999997661115557788888888*************98665 PP

  Pyr_redox_3 245 ykvktedgkkvevkddvvlatGykpd 270
                    +   d+++  ++++v+latG + +
   EPX73286.1 242 --IYYGDNES-LNYSKVILATGGEAN 264
                  ..67777555.5689*******9876 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 8.2e-06
  Pyr_redox_3 163 agqkvvViGgknSavDaAlelvrkgaeVtvvtrgseiekeesdpsyslkpdienrleelvkeekikvlfnaevkeikekeeeykvktedgkkvevkdd 260
                  +++++v+iG +  + + A+ l +++ ++  +++    + + +++   +k+  e++  + + +++ik +++    ++ +++   kv  +dg+ +   + 
   EPX73286.1 297 QKKNIVIIGSSFIGLELAIALKDHNVSIVGMDSAPFAKIMGEEMGNAIKALHEQNGTHFYLNNSIKEAKK----SLGDSSIVDKVVLKDGQ-ILPAEV 389
                  7899*****************9998888888888887888888888888888877777777766663333....33333333467789985.556699 PP

  Pyr_redox_3 261 vvlatGykpdlsflkkslfeldedgrpvlteeteetnvpglflaG 305
                  vvla+G kp+ls ++   ++l++dg ++++++     +++++ +G
   EPX73286.1 390 VVLAVGVKPNLSYIA-DHVQLEKDGGVKVDKNCRVQGLEDVYAVG 433
                  9*************9.77788899999999998888888888877 PP

>> Reductase_C  Reductase C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.0   5.6e-08   8.4e-05       1      75 [.     484     559 ..     484     564 .. 0.90

  Alignments for each domain:
  == domain 1  score: 23.1 bits;  conditional E-value: 5.6e-08
                  EEEEEETTEEEEEEE-..-TT--EEEEEEETTTTEEEEEEEETTEEEEEEEES-HHHHHHHHHHTTTT----HHHHH CS
  Reductase_C   1 WfWSDqydlklQiaGl..atgadevvvRgdpeerafsvfylrdgrlvaveavnrprdlmaarrliaagasvdpaala 75 
                  +fWS q+  +++++G   a+g d++vv g+  + +f++fy++++++v v+++ +   + ++ rl+  g  +++ +l 
   EPX73286.1 484 FFWSAQG-KQIRYCGNnaAEGFDDIVVQGSVPDYKFAMFYTKGEKVVSVSSIMKDPTVSQCSRLFLTGSMPTKSQLK 559
                  6*****7.58*****8556789********7779*******************************999999988875 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.1     0.011        16       1      30 [.     158     191 ..     158     195 .. 0.79
   2 ?    4.3   0.0     0.017        25     159     207 ..     222     266 ..     205     283 .. 0.72
   3 ?    1.1   0.1      0.16   2.4e+02       2      29 ..     301     328 ..     300     335 .. 0.79
   4 ?    3.6   0.1     0.027        41     151     208 ..     343     404 ..     335     484 .. 0.61

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.011
                 EEEEECTSHHHHHHHHHHHHTT....EEEEESSS CS
         DAO   1 dvviiGGGiiGlstAyeLarrg....Vtllekgd 30 
                 +v+i+GGG   + +A +L +r+    +t+l ++d
  EPX73286.1 158 HVCIVGGGKGASVAAEYLRERNykgrITVLTRED 191
                 79******97777888887774456*****9984 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.017
                 TT-EEEESECEEEEEEEETCEEEEE.EECTEEEEEEEEEEE--GGGHHHH CS
         DAO 159 lGveilegtevtgleeedgkvwgve.rttpgendaadavVnaaGawsdll 207
                 l +e++++++v +++    k ++++  +++  n  + +v++a+G  +++l
  EPX73286.1 222 LDIEFRFKSNVNKIDP---KTKTIYyGDNESLN--YSKVILATGGEANKL 266
                 5689999*******54...46677663332333..678*******99855 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.16
                 EEEECTSHHHHHHHHHHHHTTEEEEESS CS
         DAO   2 vviiGGGiiGlstAyeLarrgVtllekg 29 
                 +viiG+  iGl  A +L  ++V ++ ++
  EPX73286.1 301 IVIIGSSFIGLELAIALKDHNVSIVGMD 328
                 9****************66667666555 PP

  == domain 4  score: 3.6 bits;  conditional E-value: 0.027
                 HHHHHHHHTT-EEEESECEEEEEEEE....TCEEEEEEECTEEEEEEEEEEE--GGGHHHH..H CS
         DAO 151 alaraaealGveilegtevtgleeed....gkvwgverttpgendaadavVnaaGawsdll..g 208
                 a+ +  e++G +++++  +++ ++ +      v +v + ++g++  a+ vV+a G+  +l+  +
  EPX73286.1 343 AIKALHEQNGTHFYLNNSIKEAKK-SlgdsSIVDKV-VLKDGQILPAEVVVLAVGVKPNLSyiA 404
                 556667899999999988887755.23223334444.555587745599*****9987755332 PP

>> K_oxygenase  L-lysine 6-monooxygenase (NADPH-requiring)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0   0.00074       1.1     186     238 ..     151     202 ..     131     211 .. 0.78
   2 !    7.1   0.0    0.0017       2.6     107     212 ..     220     319 ..     215     330 .. 0.73
   3 ?   -1.7   0.0      0.81   1.2e+03     144     167 ..     382     405 ..     348     412 .. 0.75

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00074
  K_oxygenase 186 eellakkriaVvGsGqSaaeifedllrrqkkvelklvtrsealeplddspfvn 238
                  ++++++ ++ +vG+G+ a+  +e l +r+ k  ++++tr+  ++p d  ++ +
   EPX73286.1 151 QNQASAPHVCIVGGGKGASVAAEYLRERNYKGRITVLTRE-DVTPYDRPKLSK 202
                  3478899*********999888888888999999999886.567777777665 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0017
  K_oxygenase 107 sqleeqvrfgeeveevepdeeeeeelltveskdaegeeeelearnlvlgvGtep.kiPevlekle...gkervvHsseylerkeellakkriaVvGsG 200
                  ++l+ + rf+++v++++p++++      +      g++e+l+  +++l++G+e+ k+P    + +       +    +++  ++e+ +kk+i+++Gs 
   EPX73286.1 220 DELDIEFRFKSNVNKIDPKTKT------IYY----GDNESLNYSKVILATGGEAnKLPLPGLDASnvyCLRSLADGTKLAAATNESGQKKNIVIIGSS 307
                  5678779999999999999973......554....778999999******966526886544433111234445555666777779***********9 PP

  K_oxygenase 201 qSaaeifedllr 212
                    + e++  l +
   EPX73286.1 308 FIGLELAIALKD 319
                  888888877765 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 0.81
  K_oxygenase 144 eeelearnlvlgvGtepkiPevle 167
                   + l a+ +vl+vG +p++  +++
   EPX73286.1 382 GQILPAEVVVLAVGVKPNLSYIAD 405
                  566778889999999998866655 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.1   6.9e-05       0.1       1      25 [.     161     187 ..     161     193 .. 0.86
   2 ?    2.9   0.0     0.086   1.3e+02       1      27 [.     303     329 ..     303     333 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 6.9e-05
                    EE--SHHHHHHHHHHHCCTE..EEEEE CS
  NAD_binding_8   1 IvGaGlsGlvaAylLakagf..dvlll 25 
                    IvG+G +++vaA +L+++++  ++++l
     EPX73286.1 161 IVGGGKGASVAAEYLRERNYkgRITVL 187
                    9****************9885678887 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.086
                    EE--SHHHHHHHHHHHCCTEEEEEE-S CS
  NAD_binding_8   1 IvGaGlsGlvaAylLakagfdvlllek 27 
                    I+G+ + Gl +A +L++++++++  ++
     EPX73286.1 303 IIGSSFIGLELAIALKDHNVSIVGMDS 329
                    9*****************999876665 PP

>> Rieske_2  Rieske-like [2Fe-2S] domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   5.9e-06    0.0089      25     100 ..      43     115 ..      26     119 .. 0.78

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 5.9e-06
                 EEEEEE-TTS-EEEEESS-TTTSSSTCCCSEEEECTTCEEEE-TTT--EEETTT-BBSS-TT.SB-BEE-EEES.TSE CS
    Rieske_2  25 qvalfrlekeevyAidnldpaseanvlsrGlvgdkkgelvvasPlykqkfdLktGecledee.vslkvypvrve.dgk 100
                 +v+l+r +k++ +A+  ++   + ++l +G v ++     +++P ++  f+ +tG++ + ++  +l+++p+  + dg+
  EPX73286.1  43 NVLLVR-AKNQYFATAGKCSH-YGAPLVNGAVTSN---GRIVCPWHGACFNSATGDVEDSPAiSALRTFPISSTeDGR 115
                 333444.699*********99.799*******999...889******************8885679***998764565 PP

>> FAD_binding_2  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1      0.45   6.8e+02       2      33 ..     159     192 ..     158     197 .. 0.83
   2 ?    1.7   0.0      0.07   1.1e+02     125     206 ..     193     266 ..     183     332 .. 0.69
   3 !   11.5   0.0   7.8e-05      0.12     374     408 ..     413     442 ..     361     445 .. 0.92

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.45
                    EEEE--SHHHHHHHHHHHHTTT..-EEEEESSSG CS
  FAD_binding_2   2 viViGsGlAGLaAAleaaeaGl..kvavvekeqe 33 
                    v ++G+G +  +AA  ++e++   +++v++ e++
     EPX73286.1 159 VCIVGGGKGASVAAEYLRERNYkgRITVLTREDV 192
                    78************99999877577888887765 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.07
                    EE-.STT-......HHHHHHHHHHHHHHTCTEEEEESEEEEEEEECTTEEEEEEEEETTTTCEEEEEESEEEE-----GG.. CS
  FAD_binding_2 125 tlhdaadarretlvtghallarlvesarkagvdfqerteadeLivedgrvtGavvenpesgrevrirakavvlatgGfgral 206
                    t++d+++  ++ ++++ +++ r  e++++++++f+++ +++++   d +  +++    ++++   ++  +v+latgG  ++l
     EPX73286.1 193 TPYDRPKLSKTLMHDHSKIALRSKEYYDELDIEFRFKSNVNKI---DPKTKTIYYG--DNES---LNYSKVILATGGEANKL 266
                    6666666655778888889999999999999999999999988...6677777666..2222...23347888888877633 PP

  == domain 3  score: 11.5 bits;  conditional E-value: 7.8e-05
                    -EEEBETTSBESTTEEESSBTEEE-STCEESSSST CS
  FAD_binding_2 374 gGvetdengrvldadgqpipGLYAaGevaaggvhg 408
                    gGv++d n+rv     q +++ YA+G  a++ + g
     EPX73286.1 413 GGVKVDKNCRV-----QGLEDVYAVGDIAHAPYAG 442
                    9**********.....*************888876 PP

>> NAD_binding_9  FAD-NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0      0.12   1.9e+02       1      31 [.     160     187 ..     160     209 .. 0.70
   2 ?    3.6   0.0     0.041        61     121     155 ..     229     261 ..     212     262 .. 0.78
   3 ?    5.8   0.0    0.0084        13     134     155 ..     375     396 ..     338     397 .. 0.76

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.12
  NAD_binding_9   1 aivGaGprGlavlerLlarakkkspleitlf 31 
                    +ivG+G  +  ++e L +r     + +it+ 
     EPX73286.1 160 CIVGGGKGASVAAEYLRER---NYKGRITVL 187
                    5999997776666666666...466666654 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.041
  NAD_binding_9 121 raevvdleeradgqavlladgaslaadaVvLAlGh 155
                    +++v +++++ +  ++   d++sl + +V+LA+G 
     EPX73286.1 229 KSNVNKIDPKTK--TIYYGDNESLNYSKVILATGG 261
                    556666666655..57889**************95 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.0084
  NAD_binding_9 134 qavlladgaslaadaVvLAlGh 155
                     +v+l+dg+ l a+ VvLA+G 
     EPX73286.1 375 DKVVLKDGQILPAEVVVLAVGV 396
                    3899****************95 PP

>> HI0933_like  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.0   0.00069         1     119     166 ..     219     263 ..     208     279 .. 0.85
   2 ?    0.4   0.0      0.14   2.1e+02     117     165 ..     346     397 ..     333     418 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.00069
                  HHHHT-EEE-S--EEEEECETTE.EEEEE.TTEEEEESEEEE----SS CS
  HI0933_like 119 lkeagvklrletevksvekeedgkfrvktkseeeleadklvlAtGGlS 166
                   +e ++++r +++v++++ ++    ++ + ++e+l+ +k++lAtGG++
   EPX73286.1 219 YDELDIEFRFKSNVNKIDPKT---KTIYYGDNESLNYSKVILATGGEA 263
                  578999***********4433...55777789**************86 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.14
                  HHHHHHT-EEE-S--EEEEECETTE.EEEEE....TTEEEEESEEEE----S CS
  HI0933_like 117 kelkeagvklrletevksvekeedgkfrvkt...kseeeleadklvlAtGGl 165
                  +  +++g +++l++++k+++k+ + +  v+    k+++ l a+ +vlA+G +
   EPX73286.1 346 ALHEQNGTHFYLNNSIKEAKKSLGDSSIVDKvvlKDGQILPAEVVVLAVGVK 397
                  555778999999999999998766655544323589************9965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (569 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       426  (0.0237604); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.60u 0.30s 00:00:00.89 Elapsed: 00:00:00.45
# Mc/sec: 3785.76
//
Query:       EPX73287.1  [L=1110]
Description: cytoplasmic leucine-tRNA ligase Lrs1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.3e-44  151.7   0.0    1.6e-32  112.6   0.0    2.9  2  tRNA-synt_1   tRNA synthetases class I (I, L, M and V)
    5.8e-17   61.5   0.0    1.4e-09   37.2   0.0    2.4  2  tRNA-synt_1g  tRNA synthetases class I (M)
    2.6e-15   56.7   0.6    7.7e-15   55.2   0.2    1.9  2  Anticodon_1   Anticodon-binding domain of tRNA
      6e-10   39.0   0.0    1.5e-09   37.6   0.0    1.7  1  tRNA-synt_1e  tRNA synthetases class I (C) catalytic domain


Domain annotation for each model (and alignments):
>> tRNA-synt_1  tRNA synthetases class I (I, L, M and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.0     9e-13   4.1e-09       3      82 ..      37     124 ..      35     132 .. 0.82
   2 !  112.6   0.0   3.5e-36   1.6e-32     104     601 ..     198     775 ..     172     776 .. 0.80

  Alignments for each domain:
  == domain 1  score: 35.3 bits;  conditional E-value: 9e-13
  tRNA-synt_1   3 yekWeeedvfkkel........ekekekkefilvdgPPyvtGslHiGhalaktlkdivirykrmkGkevlyvpGwDhaGlaieakvek 82 
                  +++We+e+vf+++         e +++ ++f    + Py +GslH+Gha++ +  ++ + ++r++Gk+vl+ +G+ + G++i a  +k
   EPX73287.1  37 QKQWENEKVFESNApledmtpeELREKYPKFFGNMPYPYMNGSLHLGHAFTLSKVEFACAFERLQGKRVLFPMGFHCTGMPICASADK 124
                  678999999987642222222144566788999*************************************************887765 PP

  == domain 2  score: 112.6 bits;  conditional E-value: 3.5e-36
  tRNA-synt_1 104 vrewkaeyaeeirkqvkrlGvsvDfdreylTldke..leeavkevfvrladkgliyrgkklvnwstklktalselEveykdkk......dali.hvaf 192
                   + w +++    r++++ +G  +D+ r  +T d +  +   v++   +l++ g i  g++   +s k   +  + + +  +        +  +  ++f
   EPX73287.1 198 AKYWLEYFPPLCRRDCSGFGLGIDWRRSFITTDANpyYDSFVRWQVNHLHKAGKIKFGERYTVYSIKDGQPCMDHDRKSGEGVgpqeytGLKMqVLNF 295
                  4668888888999******************997643788899************************9999999888666655222222333303345 PP

  tRNA-synt_1 193 pladkee..........vklviaTTtPeTllgdtavavnpeldyv.....itkeklilaeallkslvkke..sek...kiledergkeLegkevelpl 270
                  p a++e+          +++++aT +PeT+ g+t   v p+l y+     + +e +i  +   ++++ +    e+   k l +++g++L+g +++ pl
   EPX73287.1 296 PDAAHESltsidlsinkIYMIAATLRPETMYGQTNCFVGPNLTYGiyeglVPGELYICTRRAASNMAFQGllRERgvvKELGTIKGQQLVGARINAPL 393
                  555555577888888889***************************9999999******99988888766654444444556689************** PP

  tRNA-synt_1 271 .vnrkipiiaddyvdkeaGtGvVkiaPahdedDyevgkk.......ynl.......evinild..edgtlteea........................ 327
                   v r++ ++  + v   +GtGvV   P   +dDy++  +       ynl       + + i++  + g+lt e                         
   EPX73287.1 394 sVYREVYVLPMESVLPTKGTGVVTSVPSGSPDDYATLSElrkkaefYNLnpewmkyDAVPIINtpSFGNLTAEFlckklkiqspkdvkqlaeakelay 491
                  889*******************************87543111122245577777763344444113456666659*********************** PP

  tRNA-synt_1 328 ...........aefeglkvfdarkkvveelkekglllkaekiehsvpfcerskkpiiyrateqWfvrvkeladaalkave...kvqfvpkskekryas 411
                             ++++g kv+ a+ kv ++l ++gl +  ++ e +v   +rs++  i+ + +qWf    e   +al +v      +f+p+  ++ +++
   EPX73287.1 492 kedfyhgvmiiGDYNGEKVEVAKPKVRQDLIKQGLAFVYNEPEGQV--ISRSGDDCIVALCDQWFLDYGEASWKALTEVAlerLNTFSPEV-RNGFKK 586
                  **********************************999888777665..79******************99888888888776556788876.567899 PP

  tRNA-synt_1 412 wleniqdWciSRqrwWGhriplfvsketeevvvreelkelvagreeeeaekkalekeakdklkkekgelekdedvlDvWFsSgswpfstl...gypee 506
                   l   ++W+  R+   G+r+p +  +   e  + +++ +++   +  +  + a + ++   l  + +++   ++v D  F  g  p+ t    +  ++
   EPX73287.1 587 NLDWLSQWACARSYGLGTRLP-WDPQFLVESLT-DSTIYMAF-YTIAHLLQGAPNGSVPGALSIKPEQM--TPEVWDYVFRNGAKPTNTSitdEALFK 679
                  999999**************9.55555554444.33333333.44444455555556666775555554..69**********998765411133456 PP

  tRNA-synt_1 507 dteelkkffpadmlleGlDiirgWvarlillslaltgsePf.kevlvhglvrdeeGrKmSKslgNvidpldvikkygadalRltli.lsdvgrdinl 601
                   ++e++ f+p+d+ ++G D i   ++  + + +a+++++ + k +  +g ++  +G KmSKs gN +   +  kk gada Rl+l+   d++ d n+
   EPX73287.1 680 LRREFQYFYPFDIRVSGKDLIPNHLTFCLYTHTAIFDEKYWpKGIRANGHLL-MNGEKMSKSTGNFMTLHEACKKFGADATRLALAdAGDTVDDANF 775
                  89***********************************997735666777655.68*******************************88899998887 PP

>> tRNA-synt_1g  tRNA synthetases class I (M)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   1.8e-08     8e-05       5      61 ..      71     127 ..      68     137 .. 0.92
   2 !   37.2   0.0   3.1e-13   1.4e-09     286     369 ..     693     778 ..     671     785 .. 0.88

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 1.8e-08
                   E--B--SS---HHHHHHHHHHHHHHHHHHHTT-EEEEEEEE---SHHHHHHHHHTTS CS
  tRNA-synt_1g   5 talpYangklHlGhllevisaDifaRykrlrgeevlfvcgtDehGtpielkAekegv 61 
                    + pY+ng+lHlGh+ +  +    + ++rl+g+ vlf  g    G+pi  +A+k   
    EPX73287.1  71 MPYPYMNGSLHLGHAFTLSKVEFACAFERLQGKRVLFPMGFHCTGMPICASADKLSR 127
                   588*************************************************98765 PP

  == domain 2  score: 37.2 bits;  conditional E-value: 3.1e-13
                   EEEEGGGHHHHHTHHHHHHHH..TT----S-EEEE--EEE--------------HHHHHHHH-HHHHHHHHHHHS-TTS-EEE-HH CS
  tRNA-synt_1g 286 hfigkdiikFHtifwPaillg..aelklpkkvvaheyltvegkKlSkSrgvvvkakealerldadllRYylaaeapekkDldfswe 369
                    + gkd i+ H  f   + ++   e   pk + a+++l ++g+K+SkS g++++ +ea +++ ad+ R  la ++++ +D++f+++
    EPX73287.1 693 RVSGKDLIPNHLTFCLYTHTAifDEKYWPKGIRANGHLLMNGEKMSKSTGNFMTLHEACKKFGADATRLALADAGDTVDDANFEEA 778
                   5679*******88766666666677789*******************************************************875 PP

>> Anticodon_1  Anticodon-binding domain of tRNA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.2   0.2   1.7e-18   7.7e-15       4     136 ..     816     935 ..     813     948 .. 0.84
   2 ?   -2.2   0.0      0.82   3.7e+03     101     137 ..     960    1002 ..     952    1015 .. 0.58

  Alignments for each domain:
  == domain 1  score: 55.2 bits;  conditional E-value: 1.7e-18
  Anticodon_1   4 ilselnklvkevteayeeyrfnkaasalyeffwndlcdwylelvkprlysesaedkraaqevllevletllrllaPfmPfitEelwqreeeel.gkke 100
                  + +e+n+l++ ++eay   +++ a+++ ++ ++n+  dwy e++ +r   +++        ++l  +e  + +laPf+P+ +E lw     ++ +k++
   EPX73287.1 816 FDNEINQLIEYAHEAYSATSYKVALKNSFYDLQNAR-DWYREVTADRG--MHK-------DLVLRWIEVQVLMLAPFTPHWSEQLW----LTVlKKPS 899
                  6689***************************99988.*********97..333.......89************************....5554999* PP

  Anticodon_1 101 simlae.wpekaeelekeleeeevellkeivkairkl 136
                  si+++  +p+++++ +++l  +++++++ + k+ir++
   EPX73287.1 900 SIHVSGrFPSASNPVNTAL-SNSLQYVRTLTKLIREA 935
                  *****99**8666665555.57888888888888874 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.82
  Anticodon_1  101 simlae.wpe.kaeel......ekele..eeevellkeivkairklr 137 
                   si++a+ +pe +a++       +      e++++  k+i++ + k+ 
   EPX73287.1  960 SIFVADqFPEwQAQYVsllqkyY---SeaENKFDD-KAIISNVDKKA 1002
                   67777778877776665543332...133556665.55555555544 PP

>> tRNA-synt_1e  tRNA synthetases class I (C) catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.6   0.0   3.4e-13   1.5e-09     207     283 ..     689     766 ..     681     784 .. 0.88

  Alignments for each domain:
  == domain 1  score: 37.6 bits;  conditional E-value: 3.4e-13
                   SEEEEEEEGGGTTTHHHHHHHHHHHHSS.S--EEEEEEE--EEETTBE--TTTT---BHHHHHTTS-HHHHHHHHHSS CS
  tRNA-synt_1e 207 eidihsGGiDLafPhhenelaqseaafd.kqlvkyflhnghlkiegekmsksLknfitikdvlkkfdprqlRllllsa 283
                    +di + G+DL+  h    l  ++a fd k + k    nghl ++gekmsks +nf+t++++ kkf + + Rl+l+ a
    EPX73287.1 689 PFDIRVSGKDLIPNHLTFCLYTHTAIFDeKYWPKGIRANGHLLMNGEKMSKSTGNFMTLHEACKKFGADATRLALADA 766
                   69**********999999**********7778888899***********************************99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1110 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       477  (0.0266049); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.79u 0.32s 00:00:01.11 Elapsed: 00:00:00.54
# Mc/sec: 6208.26
//
Query:       EPX73288.1  [L=356]
Description: eukaryotic protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      5e-68  228.5   2.5    3.2e-67  225.9   0.1    2.9  4  DUF383    Domain of unknown function (DUF383)
    7.9e-23   80.1   1.8    3.2e-22   78.1   1.8    2.1  1  DUF384    Domain of unknown function (DUF384)
  ------ inclusion threshold ------
      0.014   15.5   0.3      0.029   14.4   0.3    1.5  1  GlgS      Glycogen synthesis protein
      0.046   13.7   0.2       0.35   10.9   0.2    2.2  1  Cnd1      non-SMC mitotic condensation complex subunit 1


Domain annotation for each model (and alignments):
>> DUF383  Domain of unknown function (DUF383)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.58   2.6e+03      83     114 ..       2      33 ..       1      36 [. 0.76
   2 ?    1.1   0.0     0.058   2.6e+02      79      95 ..      69      85 ..      54      93 .. 0.81
   3 !  225.9   0.1     7e-71   3.2e-67       2     188 ..      95     276 ..      94     278 .. 0.96
   4 ?   -2.1   0.0      0.58   2.6e+03      82      96 ..     287     301 ..     282     340 .. 0.67

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.58
      DUF383  83 sqlpegRelllepqesdkelplqkllpftehk 114
                 s+l+e   +l +++++ + l  q llp+t  +
  EPX73288.1   2 SELQELAGFLHDQNPQVRMLATQHLLPYTARN 33 
                 56666677788888888999999999999765 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.058
      DUF383 79 fanlsqlpegRelllep 95
                ++n+sq  ++R++l+++
  EPX73288.1 69 LVNVSQNVAVRRVLMDE 85
                78889999999888886 PP

  == domain 3  score: 225.9 bits;  conditional E-value: 7e-71
      DUF383   2 ildskslladlacmLLsNltkeesiaaqlleaklkvsqtpeessksvkalekLldlfvkgatkdlnksanydylayvfanlsqlpegRelllepqesdk 100
                 ++++++ ladl+cmLL+Nl+kee+  + +l  ++kv  ++   s s++++++L+dlfvkg+++ +n+ an+d+la+vfa+++++++gR+++++ qe+d+
  EPX73288.1  95 VTNPEHGLADLTCMLLCNLAKEEDFVR-IL--DMKVPLRE--FSLSKNIIDQLMDLFVKGTNHGINQYANFDFLANVFADMTRFERGRKYFTTIQEYDN 188
                 7899*********************99.99..78888866..667899*************************************************** PP

      DUF383 101 elplqkllpftehksiirRgGvastiKNccFekeahklLlseeevdllpylllpLagpeeldeedqekLpeelqllpedKeRepdsdi 188
                 ++p++kl++fteh+s  rR+Gva +iKN+cF+++ hk L++ee v+llpy+llpLagpe++deed+e++ +elqllp+dK+Repd  i
  EPX73288.1 189 VYPISKLIVFTEHNSMLRRTGVATIIKNICFDTPFHKILMDEEGVNLLPYILLPLAGPEDMDEEDMEGMFDELQLLPDDKKREPDMFI 276
                 *************************************************************************************876 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 0.58
      DUF383  82 lsqlpegRelllepq 96 
                 l+ ++egRe+l +++
  EPX73288.1 287 LCATREGREHLRSRK 301
                 677777777765554 PP

>> DUF384  Domain of unknown function (DUF384)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.1   1.8     7e-26   3.2e-22       1      52 [.     283     334 ..     283     337 .. 0.97

  Alignments for each domain:
  == domain 1  score: 78.1 bits;  conditional E-value: 7e-26
      DUF384   1 sLllLcatrhgReyLRskgvYpilRelhkaekdeeveeaierlVqvLirdEs 52 
                 sL+lLcatr+gRe LRs++vYpi+Relh++++de+++  +++lVq+L+rdE+
  EPX73288.1 283 SLILLCATREGREHLRSRKVYPIIRELHLHVEDEDLRGLCDQLVQLLVRDEA 334
                 89*************************************************7 PP

>> GlgS  Glycogen synthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.3   6.4e-06     0.029       3      23 ..     151     171 ..     150     179 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 6.4e-06
                 -TTTTHHHHHHHHHHHHHHHH CS
        GlgS   3 dkdlyslknFDFLarsFaRmh 23 
                 ++ ++ + nFDFLa  Fa m 
  EPX73288.1 151 NHGINQYANFDFLANVFADMT 171
                 678999*************97 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.2   7.8e-05      0.35      24     122 ..       5     125 ..       2     156 .. 0.61

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 7.8e-05
        Cnd1  24 epLrkrLkDedpyVRktaaivvakL...ilnd....mvkekgflselaklleDenprVvanalaalteisek...senaiynllpdiisklsdalne.. 110
                 ++L   L+D++p+VR+ a   ++      +++    +  + + +++l+ ll+D+ p++ + a++al ++s++      ++ + + +++++++++ ++  
  EPX73288.1   5 QELAGFLHDQNPQVRMLATQHLLPYtarNSPQfdiwFNNNCEPVKDLKALLKDK-PQIASQAITALVNVSQNvavRRVLMDEEFLNLVFSIVTNPEHgl 102
                 567777899999999988888877765544442221222333788888888885.88999999999999988543222333333333333333222233 PP

        Cnd1 111 ...........csewgqitilef 122
                            ++e++++ il++
  EPX73288.1 103 adltcmllcnlAKEEDFVRILDM 125
                 33555555555777777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       445  (0.0248201); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 2415.74
//
Query:       EPX73289.1  [L=552]
Description: tyrosine phosphatase Pyp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.6e-66  221.9   0.1    1.2e-65  221.3   0.1    1.2  1  Y_phosphatase    Protein-tyrosine phosphatase
     0.0012   19.0   0.0     0.0021   18.2   0.0    1.4  1  PTPlike_phytase  Inositol hexakisphosphate
     0.0013   18.5   0.0     0.0028   17.5   0.0    1.6  1  DSPc             Dual specificity phosphatase, catalytic doma
     0.0024   17.9   0.0     0.0039   17.2   0.0    1.3  1  Y_phosphatase3   Tyrosine phosphatase family


Domain annotation for each model (and alignments):
>> Y_phosphatase  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  221.3   0.1   2.8e-69   1.2e-65       3     233 ..     294     534 ..     292     535 .. 0.91

  Alignments for each domain:
  == domain 1  score: 221.3 bits;  conditional E-value: 2.8e-69
                    GGSSSTTS-B-CTTEEEB..TTTTTTTTEEEEEEEEECTEEEEEEEEE---GGGHHHHHHHHHHT..T--EEEEESBSEETTEESS---S-SST.S CS
  Y_phosphatase   3 eknRykdilpydksrVkl..kssegpsdYInAnyikgykkekkyIatQgPlkstvedFWrmvwqe..kvkvivmLtsleekgrekcaqYwpeee.e 93 
                    +knRy+di+py+ +rV+l  ++ ++ +dYInA+y+++  ++++yIa+Qg lk ++edFW+m w++  +v  ivmL s+ e+gre   +Ywp++  +
     EPX73289.1 294 KKNRYSDIVPYNLTRVHLshRDLNQGNDYINASYVNT--STSNYIACQGSLKLSLEDFWQMSWDHfgDVGSIVMLGSFYEAGREMSVPYWPQDGvH 387
                    8*****************5544556678*******44..479***********************999***********************66548 PP

                    SEEEETTEEEEEE.EEEEEESSEEEEEEEEEETTTTEEEEEEEEEEESSS-SSSSGSCCHHHHHHHHHHHHHHSTTSS-EEEECSSSSHHHHHHHH CS
  Y_phosphatase  94 esleygkikvtlkekekedekeyvlrelevkkkkeeseerevkqlqytnWpdhgvpesaksllklirkvekskeaksgpvvVhCsaGvgRtgtfva 189
                     +++yg+++vtl ek++ d++ ++lr+l v+++++ + +++v+++qy+nW+d + pe+ + ++++++ v++++  ++gp+vVhCsaGvgRtgtf++
     EPX73289.1 388 SKQTYGSYTVTLLEKKRIDDSGCILRKLDVQREGSTT-SKTVNHFQYENWSDCNSPEKISLMINFLKFVNSYE--HTGPLVVHCSAGVGRTGTFIT 480
                    8************99999*************999995.9**********************************..9******************** PP

                    HHHHHHHHHH...HSE........EEHHHHHHHHHTTSTTSS-SHHHHHHHHHHH CS
  Y_phosphatase 190 ldillqqlea...eee........vdvlqivkelrkqRpgmvqtleqyiflyevi 233
                    ld ll+  e+   +            ++q + ++r+qR++mvq++ q++f+y++i
     EPX73289.1 481 LDSLLRYPEEsfkN-FsfgmddseDIIFQEIDHIRTQRMKMVQSFIQFKFIYDLI 534
                    *******9996640.15555555577999***********************987 PP

>> PTPlike_phytase  Inositol hexakisphosphate
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   4.7e-07    0.0021     115     156 .]     442     486 ..     436     486 .. 0.79

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 4.7e-07
                      HHHHHHHHHHHHTS-T...T-EEEEE-SSSSHHHHHHHHHHHHHH CS
  PTPlike_phytase 115 eedfdalvsilkeape...ktalvfnCqmGrgRTTtamviatLll 156
                      +e+++ ++++lk +++   + +lv++C++G+gRT t++++ +Ll+
       EPX73289.1 442 PEKISLMINFLKFVNSyehTGPLVVHCSAGVGRTGTFITLDSLLR 486
                      456777777777665556699****************99988875 PP

>> DSPc  Dual specificity phosphatase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   6.2e-07    0.0028      53      92 ..     439     480 ..     405     523 .. 0.76

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 6.2e-07
                 SCCGGGHHHHHHHHHHH..HHTT-EEEEEESSSSSHHHHHHH CS
        DSPc  53 tkiskyleeavefidka..kqkgkkvlVHCqaGisRSatlii 92 
                  +  + ++ +++f++ +   +  +  +VHC aG+ R++t+i+
  EPX73289.1 439 CNSPEKISLMINFLKFVnsYEHTGPLVVHCSAGVGRTGTFIT 480
                 344445555666666442256678899************985 PP

>> Y_phosphatase3  Tyrosine phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   8.6e-07    0.0039      88     140 ..     422     481 ..     372     491 .. 0.71

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 8.6e-07
  Y_phosphatase3  88 eeeaeetlaelYrelle....sakkayrkvfealad.ee..pvlfHCtaGKDRTGvlaal 140
                     ++++++  +  Y+++ +    ++ + + ++++ + + e+  p+++HC+aG  RTG ++ l
      EPX73289.1 422 STTSKTVNHFQYENWSDcnspEKISLMINFLKFVNSyEHtgPLVVHCSAGVGRTGTFITL 481
                     34444444456777777744444455556666666654489**************98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (552 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       354  (0.0197445); expected 358.6 (0.02)
Passed bias filter:                      272  (0.015171); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3840.26
//
Query:       EPX73290.1  [L=1007]
Description: GTPase activating protein Gyp51 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.1e-39  135.4   0.1    2.1e-39  135.4   0.1    4.0  3  RabGAP-TBC    Rab-GTPase-TBC domain
      0.001   19.4   2.3      0.001   19.4   2.3    3.5  3  DUF3496       Domain of unknown function (DUF3496)
     0.0061   17.3   4.1     0.0061   17.3   4.1    2.8  2  Occludin_ELL  Occludin homology domain


Domain annotation for each model (and alignments):
>> RabGAP-TBC  Rab-GTPase-TBC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   1.2      0.26   1.6e+03      29      59 ..     181     211 ..     162     227 .. 0.69
   2 !  135.4   0.1   3.6e-43   2.1e-39      41     215 .]     616     802 ..     596     802 .. 0.85
   3 ?    1.9   0.3     0.025   1.5e+02      25      60 ..     911     947 ..     858     962 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.26
  RabGAP-TBC  29 eksekeksklekseeskelsqIkkDvprtfp 59 
                 + s+ ++++ ++ ee+++ + ++ Dv+ t +
  EPX73290.1 181 NSSKLKHTEDQTPEENEKKKIVDDDVSKTDH 211
                 34455555566666666688888****9988 PP

  == domain 2  score: 135.4 bits;  conditional E-value: 3.6e-43
  RabGAP-TBC  41 seeske.lsqIkkDvprtfp.........es...esfknkqgqnqLeriLkaysiynpevgYcqGmndivaplllvsldeeeaFwcfvsLlekyklrdl 126
                 +++s e  ++I kD+ rtfp         ++   + ++ ++   +L+r+L+ +++  pevgY+qGm+ i++ ll ++l+  +aF ++v L ++y+l+++
  EPX73290.1 616 QKKSCEsDKAICKDLDRTFPpetlerffsNRgqkSPDTVADSIANLHRVLRSLANAVPEVGYTQGMSWIAGSLL-MYLPPPQAFSMLVLLFKEYHLQSI 713
                 333333489***********9766555431143233444466679*****************************.9999999***************** PP

  RabGAP-TBC 127 ytsslpglkrklkvleellkkkdpklykhlkeegldlelfaikwfltlflrefpletvlrlwD.lllegekfvllrvalailklleeell 215
                 + ++l+gl r ++++ +l+++++p+l+ hlk++++++  +a++wfltlf+++fpl++v++++D ll+ g+ ++ll+++l +lk++e+ ll
  EPX73290.1 714 FCPELKGLGRIMHQFTRLVEDFMPALAVHLKKNEIETCSYASEWFLTLFAYKFPLDVVAKIYDiLLFYGS-TILLNIGLGLLKNSEKSLL 802
                 ***************************************************************6666776.55**********9999876 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.025
  RabGAP-TBC  25 ekkqeksekeksklekseeskelsqIkkDvprtfp.e 60 
                   kq+++e+++ + +  + + els+Ik+Dv+ +f+ e
  EPX73290.1 911 VLKQQAKEQSEMESRITSLHAELSKIKTDVEGSFQgE 947
                 4567777777788888888888*********999942 PP

>> DUF3496  Domain of unknown function (DUF3496)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.2      0.92   5.5e+03      26      60 ..     181     215 ..     178     228 .. 0.76
   2 ?    3.4   2.3     0.016        94      39      76 ..     868     905 ..     843     911 .. 0.82
   3 !   19.4   2.3   1.7e-07     0.001       2      66 ..     920     984 ..     919     996 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.92
     DUF3496  26 nkteLEkykqlyleelkvrksLsnklnktnerLae 60 
                 n ++L++ + +  ee + +k++ + ++kt+  L  
  EPX73290.1 181 NSSKLKHTEDQTPEENEKKKIVDDDVSKTDHDLPI 215
                 56788888888899999999999999999987754 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.016
     DUF3496  39 eelkvrksLsnklnktnerLaevstkllvekeqnrsll 76 
                  +l+  ks  + ln + + L+e+ +kl+ e e ++s+l
  EPX73290.1 868 VQLENTKSTNKSLNDHFSTLNETMSKLHAEHESMNSML 905
                 478999999***********************999886 PP

  == domain 3  score: 19.4 bits;  conditional E-value: 1.7e-07
     DUF3496   2 sqmElrikdLeselskmKtsqedsnkteLEkykqlyleelkvrksLsnklnktnerLaevstkll 66 
                 s+mE ri +L +elsk+Kt  e s + e+E      l+ +   + L+++l k++++Lae++ +l 
  EPX73290.1 920 SEMESRITSLHAELSKIKTDVEGSFQGEMEAIIAENLKIMSEGQVLEDELFKKEKKLAETKVNLA 984
                 89******************99999*****99999999999999***************987775 PP

>> Occludin_ELL  Occludin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.6       1.1   6.6e+03      36      74 ..     149     190 ..     136     204 .. 0.58
   2 !   17.3   4.1     1e-06    0.0061       6      97 ..     845     941 ..     842     943 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 1.1
  Occludin_ELL  36 kkfseLerelkelkegsk...eykkieeeilqeykklkkdpe 74 
                   k++  L++++ + +e+++    ++++ + il++ +klk++++
    EPX73290.1 149 KELDGLKDKTASKSEDDEaatAEEHVDQPILENSSKLKHTED 190
                   556666666666655555555555555666655555554332 PP

  == domain 2  score: 17.3 bits;  conditional E-value: 1e-06
  Occludin_ELL   6 saeqrerYkaeFnkeYkeYkelhaeleevskkfseLerelkelkegsk....eykkieeeilqeykklkk.dpeyqekkkrceyLkekLshiKklik 97 
                   s++  ++Y +e+++  k+ ke+  +le+++++ + L+++ ++l+e+ +    e++++++ +l+e   lk+  +e  e++ r++ L+++Ls iK+ ++
    EPX73290.1 845 SKSAIDTYGNEYDTLLKTQKEVDVQLENTKSTNKSLNDHFSTLNETMSklhaEHESMNSMLLREKLVLKQqAKEQSEMESRITSLHAELSKIKTDVE 941
                   566778999999999999999999999999999999999999999888788788888888887766666648889999***************9885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1007 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2117  (0.118077); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.95u 0.30s 00:00:01.25 Elapsed: 00:00:00.52
# Mc/sec: 5774.36
//
Query:       EPX73291.1  [L=972]
Description: hypothetical protein SOCG_01044 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.6e-20   72.7  22.6    1.9e-18   66.6  11.1    2.4  2  ALMT         Aluminium activated malate transporter
    2.2e-17   63.4  29.4      3e-15   56.5  13.5    2.6  2  FUSC_2       Fusaric acid resistance protein-like
    1.3e-14   54.2  10.7    4.1e-08   32.7   0.5    3.2  3  ArAE_2_N     Putative ER transporter, 6TM, N-terminal
    6.3e-11   42.6   1.0    8.5e-11   42.1   0.1    1.7  2  ArAE_2       Aromatic acid exporter family member 2
    3.1e-08   32.7  10.0    6.7e-08   31.5  10.0    1.5  1  FUSC         Fusaric acid resistance protein family
    0.00013   22.1   6.1    0.00013   22.1   6.1    2.8  2  ArAE_1       Aromatic acid exporter family member 1
  ------ inclusion threshold ------
      0.021   14.6   0.3       0.12   12.2   0.1    2.2  2  SpoVIF       Stage VI sporulation protein F
       0.13   11.5   0.0       0.25   10.6   0.0    1.3  1  Herpes_UL16  Herpesvirus UL16/UL94 family


Domain annotation for each model (and alignments):
>> ALMT  Aluminium activated malate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   3.7   4.7e-05       0.1      18     230 ..      36     247 ..      23     256 .. 0.75
   2 !   66.6  11.1   8.5e-22   1.9e-18      11     219 ..     577     778 ..     573     787 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 4.7e-05
        ALMT  18 GlaltLvsllyflrplykelgkn..avWailTVvvvlefsvGATlskGlnRalaTliAGglalgvselasssgkileeivigvsvF..iiaalatflrl 112
                   al ++  l+++rpl +++g++   + +i T    ++ +vG  +    +  l+T+i+ g a+g ++la      +     ++++F  i ++++ ++r 
  EPX73291.1  36 VAALFICQTLVLIRPLSRNIGSYpfLIITIQTLFYPIQATVGGQVEVIYESLLGTVIGLGWAVGSKFLAVVANRNGYSGAAVLAIFltIGSFISGYIR- 133
                 568999999************983347788888888899**************************999977777666655555555104556666666. PP

        ALMT 113 iPaikarYdYgvlvflLTF..c.lvvvsgyrtdevielAvkRfltiaiGaliclivsifvfPiwaGedLh.klvaknleklakslegcvdeyleekeke 207
                      +rY +  + ++  F  c l ++  + +    +   + ++  +i a+++ +vsif+ P    +dL  ++  + +++l ++l+gc ++++     +
  EPX73291.1 134 -----SRYGFRSMCIIWIFidCfLMTIDPHGESVPSSFYTSLVYPSLIAAGVVFLVSIFIPPTRMASDLVgNSALSYMDELMNCLDGCLQGFFPSGDTS 227
                 .....55555544444444225245555555555588888889999999999***********98899863788899****************966666 PP

        ALMT 208 rkileyeakeedslysgyksvln 230
                  +i+ ++  +e+  +  y++vl 
  EPX73291.1 228 -SISYSS--SEEFRLTVYRTVLR 247
                 .444333..56777788888875 PP

  == domain 2  score: 66.6 bits;  conditional E-value: 8.5e-22
        ALMT  11 vvfslkvGlaltLvsllyflrplykelgk.navWailTVvvvlefsvGATlskGlnRalaTliAGglalgvselasssgkileeivigvsvFiiaalat 108
                 v + lk++  ++L s++ f +   ++ gk  + Wa +    vle +v ATl+ G+ Ral+Tl++ + a ++ e+++     +  +vi+ ++F+++ ++ 
  EPX73291.1 577 VKYGLKMAAGISLLSIVAFQKSTAHDYGKwDGQWALISTLFVLEVTVSATLRVGFFRALGTLSGAVYAYVAWEISR-----GWSYVIASLTFLVSWVSC 670
                 77899***********************95689******************************9888887777765.....4567************** PP

        ALMT 109 flrliPaikarYdYgvlvflLTFclvvvsgy..rtdevielAvkRfltiaiGaliclivsifvfPiwaGedLhklvaknleklakslegcvdeyleeke 205
                 ++ +  +    Y   ++vf +TF  ++ + y  ++ + ++lAv Rfl +++G++++++v+i+vfP+ a   L k+vak   kl+  l + ++ey+  + 
  EPX73291.1 671 YIMFCTK----YSGVATVFNITFPPILYGAYlgNKSSTFHLAVFRFLDVIVGIGMAIVVNIVVFPYLARRVLIKEVAKA-CKLSLKLYNTMSEYMLSST 764
                 **99977....9999****************44455569*****************************99999999876.5899999999999988776 PP

        ALMT 206 kerkileyeakeed 219
                 ++ +++  ++ e++
  EPX73291.1 765 HHASTNLCDDMENQ 778
                 66566666665554 PP

>> FUSC_2  Fusaric acid resistance protein-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   7.9   5.9e-05      0.13      20      93 ..      67     147 ..      37     188 .. 0.73
   2 !   56.5  13.5   1.3e-18     3e-15       9     127 .]     603     725 ..     587     725 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 5.9e-05
      FUSC_2  20 taaivlsptlgasltravqRilGtvlGavlall..llyllpg.n.lalallvfll...vfliafflkrnyalafifltlla 93 
                 t +  ++ t+g+ +  +++ +lGtv+G+ +a+   +l+++ + n +  a++++++   + +i+  ++++y+++ +++  + 
  EPX73291.1  67 TLFYPIQATVGGQVEVIYESLLGTVIGLGWAVGskFLAVVANrNgYSGAAVLAIFltiGSFISGYIRSRYGFRSMCIIWIF 147
                 45667799***********************99654444444246555555555511233334455789999999987544 PP

  == domain 2  score: 56.5 bits;  conditional E-value: 1.3e-18
      FUSC_2   9 lglwrgeWalitaaivlsptlgasltravqRilGtvlGavlallllyllpgn.lalallvfll..vfliafflkrny.alafif.lt.llalllyslaa 101
                 +g w g Wali+ ++vl+ t++a+l+ ++ R lGt+ Gav a++++ +  g  +++a l+fl+  v ++++f  ++y ++a++f +t + +l+ + l  
  EPX73291.1 603 YGKWDGQWALISTLFVLEVTVSATLRVGFFRALGTLSGAVYAYVAWEISRGWsYVIASLTFLVswVSCYIMFC-TKYsGVATVFnITfPPILYGAYLG- 699
                 677************************************************77****8888883444444444.455345555535557777777776. PP

      FUSC_2 102 gsgnpieialhRlldvliGiliallv 127
                 ++ + +++a  R+ldv++Gi +a++v
  EPX73291.1 700 NKSSTFHLAVFRFLDVIVGIGMAIVV 725
                 5888899****************986 PP

>> ArAE_2_N  Putative ER transporter, 6TM, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   1.3     1e-05     0.023      18      95 ..      31     108 ..      26     113 .. 0.89
   2 !   32.7   0.5   1.8e-11   4.1e-08     140     329 ..     114     304 ..     112     418 .. 0.87
   3 !   12.9   0.1   1.9e-05     0.043     204     257 ..     717     770 ..     714     817 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1e-05
    ArAE_2_N  18 vifRswvavwvaiiLmvipptarwlGtaayLllivsvivpsGggsvivfilialllllgiclawawaviamkianrar 95 
                 ++++  +a++++  L++i p  r++G+ ++L+  +  +  + +  v + + +    llg+++++ wav   ++a+ a+
  EPX73291.1  31 LLLKPVAALFICQTLVLIRPLSRNIGSYPFLIITIQTLFYPIQATVGGQVEVIYESLLGTVIGLGWAVGSKFLAVVAN 108
                 6788899**********************************9999999**99999***********998888777665 PP

  == domain 2  score: 32.7 bits;  conditional E-value: 1.8e-11
    ArAE_2_N 140 vsvvyavllcvflffvgrlrakspkfalgaifgiIaadvfltyapmlPlfapgtlglallkPmgiglalkvvvsllifPt.tssfqvlktmlkllkllk 237
                 +++v+a++l +  f+ g++r+++  f+   i+ i++ + ++t++p+  +  p ++ ++l+ P++i++++ ++vs+ i Pt   s +v +++l+++ +l 
  EPX73291.1 114 GAAVLAIFLTIGSFISGYIRSRYG-FRSMCIIWIFIDCFLMTIDPHGES-VPSSFYTSLVYPSLIAAGVVFLVSIFIPPTrMASDLVGNSALSYMDELM 210
                 679********************9.************************.*****************************74699*************** PP

    ArAE_2_N 238 kalkfn.snflatlepsnesewlnfk..klekditkirslypkleaelaflplEfsigrfsaedvkelrstlrrlissiagLvyfydlleelrav 329
                 + l+   + f+ + + s  s  ++ +  +l+  +t +r+ ++k + +l     E+ ++   ++ +k+l   l+r+ + ++  v  +++l+++ ++
  EPX73291.1 211 NCLDGClQGFFPSGDTSSISY-SSSEefRLTVYRTVLRDRLNKFSTDLRNSQFELNFSFIPIGVLKDLEGVLQRTSLTMSANVAACISLYRAFNF 304
                 *99964166776666655443.22221157778899********************************************999999999998653 PP

  == domain 3  score: 12.9 bits;  conditional E-value: 1.9e-05
    ArAE_2_N 204 iglalkvvvsllifPttssfqvlktmlkllkllkkalkfnsnflatlepsnese 257
                 +g+++ +vv++++fP   +++++k+++k+ kl  k+ +  s+++ ++ ++++++
  EPX73291.1 717 VGIGMAIVVNIVVFPYLARRVLIKEVAKACKLSLKLYNTMSEYMLSSTHHASTN 770
                 799*********************************999999999999998875 PP

>> ArAE_2  Aromatic acid exporter family member 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1       2.2   4.8e+03       2      60 ..     352     414 ..     352     433 .. 0.56
   2 !   42.1   0.1   3.8e-14   8.5e-11       3     228 ..     731     962 ..     730     963 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 2.2
      ArAE_2   2 rPksakrlvrktlaktlselgdlyckvlsfaaerle......nphihikaerdqirkkilevlek 60 
                 rP+s+k ++++ l    ++++d+  +v+   +   +      +  +++++e  qi+++i ++ e+
  EPX73291.1 352 RPQSSKDIFKTYLDYFSQNVSDISKRVMASLQISRSvllwliSASKEVSDE--QILEHISSLSEE 414
                 678888888877776666677666666655444332345555555555555..566666555544 PP

  == domain 2  score: 42.1 bits;  conditional E-value: 3.8e-14
      ArAE_2   3 PksakrlvrktlaktlselgdlyckvlsfaaerlenphihikaerdqirkkilevleklaglkgllvllkfElslkGrwpskkyarlqalvselvqlla 101
                 P+ a+r++ k +ak+ +   +ly   ++ +      +  h++++   + +  ++++ +l +++ ll l ++E+ lkG++psk + +l++ +s ++  l+
  EPX73291.1 731 PYLARRVLIKEVAKACKLSLKLYNTMSEYMLSST--H--HASTN--LCDDMENQIVFHLSKATDLLLLTNMEFRLKGPFPSKLFGQLIDKLSVMTGRLV 823
                 5668888888999999999999999999888832..3..33333..44567788999****************************************** PP

      ArAE_2 102 rLlvvlkrlepeewlkrllrrvglldpeliadvlavlsmasqaLktGdpLPeilpapLvkrhlellrkqlklee................seeeadsla 184
                  L  v +r+   ++ ++++++v    ++lia + ++++++s ++  ++p P +lp   + r  +   +q   ++                 +ee+ + a
  EPX73291.1 824 ILNKVRARF-GPYLYQEVVENVIRYRKSLIASISLTMYILSHSIMVKSPVPYFLP---SSRNAHWNLRQAIMKDiqiksgynsdnpdetyVSEESSPTA 918
                 *********.6788899999999999*****************************...44443333333333335689999999999955444444444 PP

      ArAE_2 185 ealslellrsedgrrfivalsialkildrlDelvlvvKglvGEk 228
                   + l l  +e  + + + + +   i++ l +l+l vK + GE+
  EPX73291.1 919 LSAALWLHGNEGVLYYYAECQVIEEIVNDLEDLLLLVKRINGEE 962
                 444444555566667777799999****************9995 PP

>> FUSC  Fusaric acid resistance protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.5  10.0     3e-11   6.7e-08      28     170 ..     609     750 ..     607     768 .. 0.84

  Alignments for each domain:
  == domain 1  score: 31.5 bits;  conditional E-value: 3e-11
        FUSC  28 ywAmtTVfiVsqPlsGavlsKslyRllGTllGaaaavll..valfvqapllfllalalWiglclalslldrnfrsYafvLAGYTaalialpava.dPet 123
                 +wA++++++V   ++ a+l  +++R+lGTl Ga+ a +   +     + +  l  l  W+ + +++++      s ++ +  +T + i   a   +  +
  EPX73291.1 609 QWALISTLFVLEVTVSATLRVGFFRALGTLSGAVYAYVAweISRGWSYVIASLTFLVSWVSCYIMFCT----KYSGVATVFNITFPPILYGAYLgNKSS 703
                 8*********************************9866522334444555556667777777777777....66667777789**9999999988**** PP

        FUSC 124 vFdiAvaRvseIvlGIvCaalVsalvfPrsvapalrarlrallrdal 170
                 +F++Av R  ++++GI+ a++V+ +vfP  +++ l ++++++++  l
  EPX73291.1 704 TFHLAVFRFLDVIVGIGMAIVVNIVVFPYLARRVLIKEVAKACKLSL 750
                 ************************************99999887655 PP

>> ArAE_1  Aromatic acid exporter family member 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   2.2      0.52   1.2e+03      35      73 ..      63     107 ..      23     153 .. 0.62
   2 !   22.1   6.1   5.8e-08   0.00013      31     140 ..     610     728 ..     581     729 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.52
      ArAE_1  35 iails....iqptkkrslrtalerllasvlaliiav..vffellG 73 
                 i+i +    iq t    +++++e ll++v++l  av   f+++++
  EPX73291.1  63 ITIQTlfypIQATVGGQVEVIYESLLGTVIGLGWAVgsKFLAVVA 107
                 333222223788888999999999999999887776213444444 PP

  == domain 2  score: 22.1 bits;  conditional E-value: 5.8e-08
      ArAE_1  31 sAgIiailsiqptkkrslrtalerllasvlaliiavvffell.Gykpiviglvlllfipltvklkle..egivvss......Vlvlhllesksislall 120
                  A I +++ ++ t + +lr+ + r l+++ ++++a+v+ e+  G + ++  l++l+  + ++ + ++  +g+++        +l  ++l +ks++++l+
  EPX73291.1 610 WALISTLFVLEVTVSATLRVGFFRALGTLSGAVYAYVAWEISrGWSYVIASLTFLVSWVSCYIMFCTkySGVATVFnitfppILYGAYLGNKSSTFHLA 708
                 588***********************************9986589999999988887666666655513444433211222256678999********* PP

      ArAE_1 121 lnelllilvGigvallvNly 140
                 + ++l ++vGig+a++vN++
  EPX73291.1 709 VFRFLDVIVGIGMAIVVNIV 728
                 ******************97 PP

>> SpoVIF  Stage VI sporulation protein F
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   5.3e-05      0.12       9      38 ..     398     427 ..     393     432 .. 0.92
   2 ?   -1.5   0.0      0.96   2.1e+03      35      48 ..     810     823 ..     808     827 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 5.3e-05
      SpoVIF   9 nvkkedilkLansvqkadlkdektlRqlik 38 
                 +v+ e+il+ ++s++++++k+++t+R+ ik
  EPX73291.1 398 EVSDEQILEHISSLSEENMKENETIRNAIK 427
                 799************************998 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.96
      SpoVIF  35 qlikqvsklankpv 48 
                 qli+++s ++++ v
  EPX73291.1 810 QLIDKLSVMTGRLV 823
                 89********9866 PP

>> Herpes_UL16  Herpesvirus UL16/UL94 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00011      0.25      86     181 ..     841     936 ..     833     941 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00011
  Herpes_UL16  86 tvelvsvkkplvpvsglellyflefgsklapaspeeiPdpaaetlpeeqvltedeivetsklvtpeelkacvv...kavtligpgaWwseekealyfy 180
                  + +++  +k l++ s   ++y+l+ + +++ + p ++P+ ++ + +  q + +d  +++      +++ + +v    + t +++  W++ +++ ly+y
   EPX73291.1 841 VENVIRYRKSLIA-SISLTMYILSHSIMVKSPVPYFLPSSRNAHWNLRQAIMKDIQIKSGY--NSDNPDETYVseeSSPTALSAALWLHGNEGVLYYY 935
                  3344444555666.666789**************************988887776665544..444444555544477899****************9 PP

  Herpes_UL16 181 a 181
                  a
   EPX73291.1 936 A 936
                  7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (972 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       781  (0.0435607); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.73u 0.33s 00:00:01.06 Elapsed: 00:00:00.51
# Mc/sec: 5702.27
//
Query:       EPX73292.1  [L=318]
Description: glucose 1-dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-50  172.1   0.0    7.2e-50  169.8   0.0    1.8  1  Aldo_ket_red  Aldo/keto reductase family
  ------ inclusion threshold ------
      0.027   14.0   0.0      0.058   12.9   0.0    1.6  1  DUF3201       Protein of unknown function (DUF3201)


Domain annotation for each model (and alignments):
>> Aldo_ket_red  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  169.8   0.0     8e-54   7.2e-50       2     293 ..      26     295 ..      25     296 .. 0.92

  Alignments for each domain:
  == domain 1  score: 169.8 bits;  conditional E-value: 8e-54
                   EEEE-SSS-ST.TS-HHHHHHHHHHHHHTT--EEE--TT-TTTHHHHHHHHHHHH-TTTGGG-EEEEEE--SSSTTSSSS-HHHHHHHHHHHHHHHT CS
  Aldo_ket_red   2 lglGtwqlgskeeiskeealellrraleaGinffDtAevYgkgqseellGealkksrkkreeviiatKvdlrdaeiksglskeniresleeslkrLg 98 
                   lglGtwq       ++++  e++++al++G++++D A +Y    +e+++G  +k+s+++r+++ +++K+      ++  +++e+i ++l++slk+L+
    EPX73292.1  26 LGLGTWQ------SQPNQTKEAVKTALQYGYRHIDAAHIY---GNENEVGDGIKESGVPRKDIWVTSKL------WCNAHTPESIPKALDNSLKELK 107
                   8999994......55899**********************...9*************************......********************** PP

                   -S-EEEEEE-S--TTS-..................HHHHHHHHHHHHHTTSEEEEEEES--HHHHHHHHHTTT--EEEEE-B-BTT-HHHHTTHHHH CS
  Aldo_ket_red  99 tdyvDllllHrpdpslp.................sieevldaleelvkeGkiraiGvSnfsveqlekakkkkkvkivavqveynllreleeegllel 178
                   +dy+D +l+H+p                       iee+++ +e+l + Gk+r+iG+Snf+ + le+++k +kvk+++ q+e +++  l ++  +e 
    EPX73292.1 108 LDYLDAYLIHWPLAFKTgaekfpkdgdniifenvTIEETWKGMEQLLETGKVRHIGISNFNEANLERILKVAKVKPSIHQMELHPF--LPQTDFVEK 202
                   ************887778********************************************************************..********* PP

                   HHHTT-EEEEBSTTGGGTTGTTTSS---SSSCCC-------TS-HHHHHHHHHHHHHHHH..TT--HHHHHHHHHTTSTT-SEEEE--SSHHHHHHH CS
  Aldo_ket_red 179 ckkkgvpliaysplggGlltgkyqseedkedkeprkdlkrdertsknldaaeelselake..hgvslaqlalryalsqpavgivipgasnieqledn 273
                    kk+g+ + aysp+g+            ++++ p+            l   ++++e+a++   g s a +++++a+  +++++vip++ n+++++ n
    EPX73292.1 203 HKKLGIHVTAYSPFGNQNTI--------YGTDIPK------------LIDHKNIKEVAASkaTGTSGANVVVSWAI--ERGTSVIPKSVNVNRIKNN 277
                   ***************65444........2222222............244567777777756888***********..******************* PP

                   HGGGG----HHHHHHHHHHH CS
  Aldo_ket_red 274 ldalelklseeevaeldell 293
                   ++    +ls++e++e+++++
    EPX73292.1 278 FQFI--PLSPKEMDEINSID 295
                   ****..***********986 PP

>> DUF3201  Protein of unknown function (DUF3201)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   6.5e-06     0.058      17     126 ..      42     151 ..      32     177 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 6.5e-06
                 HHHHST..TSEE---EEE-S-EEEETTEEEE--S-EEEEEEETTEEEEE.ETTEEEEEEEEEGGG--HHHHHHHHHH-SEEEEESS-TTT-EEEE..TT CS
     DUF3201  17 lkeelkrfgfkveeveevfnaylyldgkweemkyphpafevkpqievga.tpesyyfvvavpkeklskefledvleafeklfiygaedfledvynclre 114
                 +k  l+ +g++  +   +++    +    +e   p   + v  +    a tpes    +    ++l  ++l+++l  ++ +f  gae+f +d  n+++e
  EPX73292.1  42 VKTALQ-YGYRHIDAAHIYGNENEVGDGIKESGVPRKDIWVTSKLWCNAhTPESIPKALDNSLKELKLDYLDAYLIHWPLAFKTGAEKFPKDGDNIIFE 139
                 555555.6666666666666666555555666666666666666555443888888888888999********************************** PP

                 S---HHHHHHHH CS
     DUF3201 115 splseevidriv 126
                 +   ee ++ + 
  EPX73292.1 140 NVTIEETWKGME 151
                 *999***99765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (318 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       518  (0.0288917); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.47
# Mc/sec: 2043.58
//
Query:       EPX73293.1  [L=77]
Description: hypothetical protein SOCG_05810 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0061   16.2   3.1     0.0079   15.9   1.9    1.8  2  Cas9-BH   Bridge helix of CRISPR-associated endonuclease Cas9


Domain annotation for each model (and alignments):
>> Cas9-BH  Bridge helix of CRISPR-associated endonuclease Cas9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.18   3.3e+03      24      30 ..      45      51 ..      44      52 .. 0.78
   2 !   15.9   1.9   4.4e-07    0.0079       7      22 ..      59      75 ..      58      76 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.18
                HHHHHHH CS
     Cas9-BH 24 lFaeeik 30
                +F+++ +
  EPX73293.1 45 IFSFLLC 51
                8999865 PP

  == domain 2  score: 15.9 bits;  conditional E-value: 4.4e-07
                HHHHHHH.HHHHHHHHH CS
     Cas9-BH  7 sRRRleR.RReRLhlLq 22
                +RR+++R R+ RLhlL+
  EPX73293.1 59 TRRLIAReRKGRLHLLN 75
                7**************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       467  (0.0260472); expected 358.6 (0.02)
Passed bias filter:                      290  (0.0161749); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.43
# Mc/sec: 541.52
//
Query:       EPX73294.1  [L=211]
Description: monomeric 2,3-bisphosphoglycerate (BPG)- dependent phosphoglycerate mutase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-42  144.8   0.0    2.9e-42  144.6   0.0    1.0  1  His_Phos_1  Histidine phosphatase superfamily (branch 1)


Domain annotation for each model (and alignments):
>> His_Phos_1  Histidine phosphatase superfamily (branch 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.6   0.0   1.6e-46   2.9e-42       1     184 [.      10     200 ..      10     207 .. 0.90

  Alignments for each domain:
  == domain 1  score: 144.6 bits;  conditional E-value: 1.6e-46
                 EEEEE---BTTB--....TT----B-HHHHHHHHHHHHHHTTS---EE..EE-SSHHHHHHHHHHHHCTT...--EEE-GGGS----GGGTT-B.HHHH CS
  His_Phos_1   1 lyLvRHGetewnaegrlqgrtdvpLteeGreqAealaerlagepidai..ysSplkRarqTaeliaealg...lpveldegLrEidfGdweglttaeia 94 
                 l+LvRHGe+ewn+ + + g++d+ L+e+G+++A+  +erl++++++++  ++S l+Ra++T+e+++++ g   l+ ++de+L+E+ +Gd++gl+++e++
  EPX73294.1  10 LVLVRHGESEWNKLNLFTGWKDPALSETGQKEAKLGGERLKSRGFKFDiaFTSSLQRAQKTCEIVLNEVGqpnLETIKDEKLNERYYGDLQGLNKDEAR 108
                 79****************************************66666666************************************************* PP

                 HH..HSHHHHHHHHH-GGG-BS-BHHHHHHHHHHHHH..HHHHHTTTSEEEEEE-HHHHHHHHHHHHT--GGGGGGB---TT-EEEEEE-SS CS
  His_Phos_1  95 eeypeeleawlrdpadvrppggEsledvaaRvaaale..elaarhegetvlvVsHggvirallarllglpleelrrleldnaslsvlefdeg 184
                 +++ +e  + +r+++d +pp+gEsl+  a+Rv +  +   l + ++ge+v + +Hg  +ral+++l gl+ +e+ + el++    v ++d++
  EPX73294.1 109 QKWGDEQVHIWRRSYDIAPPNGESLKNTAERVLPYYKstVLPHVTKGEKVFIAAHGNSLRALIMDLEGLSGDEIVKRELATGVPIVYRLDKN 200
                 *************************************433445556666*********************9999988887766666555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       454  (0.0253221); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.31s 00:00:00.81 Elapsed: 00:00:00.50
# Mc/sec: 1280.00
//
Query:       EPX73295.1  [L=374]
Description: enoyl-[acyl-carrier protein] reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      4e-17   62.4   0.0    7.1e-17   61.6   0.0    1.4  1  ADH_zinc_N    Zinc-binding dehydrogenase
  ------ inclusion threshold ------
       0.11   13.5   0.0       0.21   12.6   0.0    1.5  1  ADH_zinc_N_2  Zinc-binding dehydrogenase


Domain annotation for each model (and alignments):
>> ADH_zinc_N  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.6   0.0   7.9e-21   7.1e-17       2     123 ..     187     316 ..     186     324 .. 0.87

  Alignments for each domain:
  == domain 1  score: 61.6 bits;  conditional E-value: 7.9e-21
                 HHHHHHHHHHHTT-EEEEEESSHHHHHHHHH.T...TESEEEETTTC.H...HHHHHHHHTTTSSEEEEEESSCSHHHHHHHHHCEEEEEEEEECSC.T CS
  ADH_zinc_N   2 vGlaavqlAkalGaeviavdsseeklelakk.l...Gadevinykea.d...lverikeltggegvdvvfecvGsgatleaalkllkpgGrlvvvGg.g 91 
                 vGlaa+qlAk++G++ i v +++  ++++k+ l   Ga++vi+ +e  +   ++e + + t+g++v++ ++c+  g++ ++  k++ +g +++++Gg +
  EPX73295.1 187 VGLAAIQLAKHFGFNSINVIRNRPDVDQLKQqLysmGANVVITDEELmNrawMKENVPKWTQGNKVKLGIDCIS-GRVATEMAKYMSEGATMATYGGmS 284
                 8*************9999888888887776643555********776667779999******************.**********************99 PP

                 SSEEEEEHHHHHHTT-EEEEE-SSCHHHHHHH CS
  ADH_zinc_N  92 kgeeefdlrnlllkeksilGsllgslreefke 123
                  ++  ++++ l++k++++ G+++ ++++e ++
  EPX73295.1 285 RQPLAVPVSLLIFKNIHFHGFWVTKWKSENPK 316
                 99999*******************96555444 PP

>> ADH_zinc_N_2  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   2.4e-05      0.21       2     104 ..     223     336 ..     222     348 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 2.4e-05
                   T-SEEE.ETTSTTHH.......HHH-TT-EEEEEES-HHHHH.HHHHHHEEEEEEEEE----.S-EEE-CHHHCTTT-EEEE--GGG...-...... CS
  ADH_zinc_N_2   2 GAdevi.dyrtedfe.......aatggegvDvvldtvggealleaslkvlpggGrlvsiggpplsaallkpakkrkgrsvkyeflfsmkas.....a 85 
                   GA  vi d +  + +       ++t+g++v + +d++ g  + ++  k+++ g+++ ++gg + ++ l+ p +    ++++++ +  +k++     +
    EPX73295.1 223 GANVVItDEELMNRAwmkenvpKWTQGNKVKLGIDCISGRVA-TEMAKYMSEGATMATYGG-MSRQPLAVPVSLLIFKNIHFHGFWVTKWKsenpkE 317
                   7777776555333334677888****************9999.99999**88799999997.35555666666677888888888854555778887 PP

                   -HHHHHHHHHHHHHHH--- CS
  ADH_zinc_N_2  86 qadileelaalieeGklrp 104
                    + +  e+ +li eG lr 
    EPX73295.1 318 YEALVLEIQELIREGVLRS 336
                   8887899999999999885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (374 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       481  (0.026828); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2680.51
//
Query:       EPX73296.1  [L=406]
Description: pyruvate dehydrogenase e1 component alpha subunit Pda1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   6.3e-120  399.7   0.0   7.4e-120  399.4   0.0    1.0  1  E1_dh           Dehydrogenase E1 component
     0.0037   16.5   0.0     0.0063   15.8   0.0    1.3  1  DXP_synthase_N  1-deoxy-D-xylulose-5-phosphate synthase


Domain annotation for each model (and alignments):
>> E1_dh  Dehydrogenase E1 component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  399.4   0.0  8.3e-124  7.4e-120       2     299 ..      83     377 ..      82     378 .. 0.99

  Alignments for each domain:
  == domain 1  score: 399.4 bits;  conditional E-value: 8.3e-124
                 HHHHHHHHHHHHHHHHHTTSS-S-----TT-HHHHHHHHHTS-TTSEEEESS--HHHHHHTT--HHHHHHHHTT-T....TTSSGTT-.-E..BTT..B CS
       E1_dh   2 klvllrrvedaldalykrkkrigfyhlsagqealkvgiaaalekeDliiteYReagvllarglsleeilaeltgkv....kgkggsrhelmyaekesri 96 
                 ++v++rr+e a+d lyk+kk++gf+hls+gqea++ g++ a+++eD+iit+YR++g+ ++rgl  ++i+ el+g+v    kgkggs+h +   + +  +
  EPX73296.1  83 TMVTIRRLELACDGLYKAKKIRGFCHLSVGQEAVAGGMESAITPEDSIITSYRCHGFAYTRGLAPRAIIGELMGRVcgasKGKGGSMH-IF--APN--F 176
                 79**************************************************************************************.77..777..* PP

                 EEE-SSTTTHHHHHHHHHHHHHHHTS---EEEEEEGGGTT-HHHHHHHHHHHHTT--EEEEEEEESEETTEEHHHH-S---GGG..TTTTS-EEEEETT CS
       E1_dh  97 lggngivgaqvplvaGialaakiegkkevailliGDgAanqGdvyealnlaalwklpvifvveNNkygisTeaekasaskeladrargvgipglrVdgn 195
                 +ggngivgaqvpl+aGi +a+k+ +k +v+++l+GDgAanqG+++ea+n+a+lw+lpv+f +eNNkyg++T+ae++sa++e+++  rg++ipglrV+g+
  EPX73296.1 177 YGGNGIVGAQVPLGAGIGFAQKYLNKPNVTFALYGDGAANQGQAFEAFNMAKLWGLPVVFTCENNKYGMGTSAERSSAMTEYYK--RGQYIPGLRVNGM 273
                 ************************************************************************************..************* PP

                 SHHHHHHHHHHHHHHHHTTT--EEEEEEE--SS-SSTTSHSHSSSHHHHHHHHHHHH-HHHHHHHHHHHTTSS-HHHHHHHHHHHHHHHHHHHHHHHHS CS
       E1_dh 196 DplavyeAvkfAaeraregkgpllielvtYRyggHsesDdpstyrtreeveevrkkkdpiqrlkelLvkkgvvseeelkeiekevrkeveeavkkaesk 294
                 D lav++A+kfA+e+++++++pl++e+vtYRyggHs+sD+++tyrtr+ev+++r+ kdpi++lk++L+++gv++ +elk+iek+vr  ++ +vk ae++
  EPX73296.1 274 DALAVKQACKFAKEYTVQNSQPLMMEFVTYRYGGHSMSDPGTTYRTRDEVQQMRAAKDPIEGLKRQLMEWGVANANELKNIEKKVRSFIDAEVKIAEES 372
                 *************************************************************************************************** PP

                 ----G CS
       E1_dh 295 kelep 299
                 + +ep
  EPX73296.1 373 PFPEP 377
                 *9987 PP

>> DXP_synthase_N  1-deoxy-D-xylulose-5-phosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0     7e-07    0.0063     117     175 ..     187     245 ..     178     307 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 7e-07
  DXP_synthase_N 117 isaalGlavardlkgekkkvvaviGDgaltgGmafealnnigelkkkllvilNdNemsi 175
                     +  + G+  a+++ ++ + + a+ GDga   G afea+n ++     ++    +N+  +
      EPX73296.1 187 VPLGAGIGFAQKYLNKPNVTFALYGDGAANQGQAFEAFNMAKLWGLPVVFTCENNKYGM 245
                     5677899999999999************************9998888888888777654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (406 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       456  (0.0254337); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2848.34
//
Query:       EPX73297.1  [L=183]
Description: pinin ue [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      2e-25   89.3  18.7      2e-25   89.3  18.7    1.9  2  Pinin_SDK_memA  pinin/SDK/memA/ protein conserved region
  ------ inclusion threshold ------
        1.2    7.8   9.3       0.41    9.2   7.0    1.3  1  MDM31_MDM32     Yeast mitochondrial distribution and morpholo
        1.4    8.9   5.0        2.6    8.1   5.0    1.5  1  Apis_Csd        Complementary sex determiner protein
        2.4    7.3   6.8        2.9    7.1   6.8    1.2  1  TMPIT           TMPIT-like protein
          5    7.3  13.0        6.9    6.9  13.0    1.2  1  GAGA_bind       GAGA binding protein-like family


Domain annotation for each model (and alignments):
>> Pinin_SDK_memA  pinin/SDK/memA/ protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   2.9      0.83     3e+03      61      93 ..      11      39 ..       1      52 [. 0.30
   2 !   89.3  18.7   5.6e-29     2e-25       3     129 ..      55     179 ..      53     180 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.83
  Pinin_SDK_memA 61 reeleeerraeqkelraleeklelkelmetwhe 93
                    +  l++e+r  q++  ++ ek+    +  t h+
      EPX73297.1 11 EDHLTKENRPDQDDDSMEIEKT----EGSTAHR 39
                    2222222222222221111111....1222222 PP

  == domain 2  score: 89.3 bits;  conditional E-value: 5.6e-29
  Pinin_SDK_memA   3 ekkRnrRlfgaLlgtLqkfkkeeekqk..ekeerraeiekrleekakeekeeleerkrek....reeleeerraeqkelraleeklelkelmetw 91 
                     e+kR++R+fgaLlgtL+kf+ke+e+++  ++ +rrae+e++l+++++eek+e e +++++    ++el+eer++  +++   + +l     ++ +
      EPX73297.1  55 ENKRGKRMFGALLGTLGKFQKEAERERqsQTRSRRAELEEKLAKRQQEEKKEFELQEAKEreqrEKELTEERKIVMDDI---DLDL-----KDLK 141
                     78*******************77666667999*********************87777441111344444444444444...5555.....8888 PP

  Pinin_SDK_memA  92 henkkalanflrTktePpiyYlPwkltekteelleeqv 129
                     ++  k+ + fl+T teP++yY+P  l +++++ l++ +
      EPX73297.1 142 QTLRKQESTFLKTDTEPHLYYRPYYLLPSQKAYLDQVK 179
                     8889999*************************998865 PP

>> MDM31_MDM32  Yeast mitochondrial distribution and morphology (MDM) proteins
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   7.0   0.00012      0.41     366     426 ..      75     143 ..      53     152 .. 0.59

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00012
  MDM31_MDM32 366 eevtskkaleeeeks........eelakeaksaeeseeekeeeeekeeeeeekyvvvdlklklndvkAa 426
                  +e+++++++++++++        +++++e+k+ e +e +++e++eke +ee+k+v+ d++l l+d+k +
   EPX73297.1  75 KEAERERQSQTRSRRaeleeklaKRQQEEKKEFELQEAKEREQREKELTEERKIVMDDIDLDLKDLKQT 143
                  3333333222222223444444344444444445555555555555556666667778********976 PP

>> Apis_Csd  Complementary sex determiner protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   5.0   0.00072       2.6       5      53 ..      85     133 ..      76     169 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00072
    Apis_Csd   5 rysrsrereqksyknensyreyretsrersrdrkerersrekkiissls 53 
                   sr  e e+k+ k +++ ++  e    + r+++e+e   e+ki+ +  
  EPX73297.1  85 TRSRRAELEEKLAKRQQEEKKEFELQEAKEREQREKELTEERKIVMDDI 133
                 335556889999999999999889999999999999999*****98744 PP

>> TMPIT  TMPIT-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   6.8    0.0008       2.9      30      98 ..      72     153 ..      21     156 .. 0.69

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0008
       TMPIT  30 klqskcskeikkq.kkrlkelksslkklkksvk............eeeeeeveelkeelkerkkvlkevesllpkknglylk 98 
                 k+q++  +e ++q + r  el+++l k +++ k            ++e+e +ee k  +++++  lk+++++l k+++++lk
  EPX73297.1  72 KFQKEAERERQSQtRSRRAELEEKLAKRQQEEKkefelqeakereQREKELTEERKIVMDDIDLDLKDLKQTLRKQESTFLK 153
                 4455544444443133444555555555544334444444433334555566666666778888888999999999999997 PP

>> GAGA_bind  GAGA binding protein-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9  13.0    0.0019       6.9      69     200 ..       5     138 ..       1     143 [. 0.60

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0019
   GAGA_bind  69 rdaalaerekvlnvlpvnkakal.leednalaalqmlrp.lesqlqeaeapelekeevasselveesavvekeeaakkrqqgkr.pkepkakkakkaar 164
                 +++ ++e + + ++ p +++ ++ +e++++ +a +  ++ ++++l+ +e+ e+++ + +   l+ +    + +ea+++rq++ r ++ +  +k +k ++
  EPX73297.1   5 EENYMKEDHLTKENRPDQDDDSMeIEKTEGSTAHRD-QNgKQHSLEGKEPVENKRGKRMFGALLGTLGKFQ-KEAERERQSQTRsRRAELEEKLAKRQQ 101
                 455566655445555655555542455555554444.4446777777775455555555555555555444.555566655333034444477777677 PP

   GAGA_bind 165 kpkeege.dlalkkakrsksekksvdlvingielDes 200
                 + k+e e + a+++++r+k+  ++ ++v++ i+lD+ 
  EPX73297.1 102 EEKKEFElQEAKEREQREKELTEERKIVMDDIDLDLK 138
                 77777775557777899999999************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2779  (0.155); expected 358.6 (0.02)
Passed bias filter:                      648  (0.0361426); expected 358.6 (0.02)
Passed Vit filter:                        88  (0.00490825); expected 17.9 (0.001)
Passed Fwd filter:                        21  (0.00117129); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.58u 0.30s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 1270.08
//
Query:       EPX73298.1  [L=929]
Description: guanyl-nucleotide exchange factor Sec74 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      5e-29  101.3   0.6      9e-29  100.5   0.6    1.4  1  Sec7            Sec7 domain
    1.6e-08   35.0   0.1    1.6e-08   35.0   0.1    2.5  3  PH              PH domain
    1.1e-05   25.8   0.0    3.1e-05   24.3   0.0    1.8  1  PH_9            Pleckstrin homology domain


Domain annotation for each model (and alignments):
>> Sec7  Sec7 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.5   0.6   1.5e-32     9e-29      62     182 ..     302     418 ..     263     419 .. 0.89

  Alignments for each domain:
  == domain 1  score: 100.5 bits;  conditional E-value: 1.5e-32
                 HHHHHHHHHCTS--TT--HHHHHHHHCCCS-B-SSHHHHHHHHHHHHHHHHHTTCTCG-SHHHHHHHHHHHHHHHHHHC-TTSCCS--HHHHHHCTTTT CS
        Sec7  62 nkevlkefvdlfdfsglrldeAlRlflssfrlpgEaqkierilekFaekyfeqnpevfenadavfvLaysiimLntdlhnpqvkkkmtledFiknnrgi 160
                  k  l+ +++ + ++++ ld+AlR+fl+ f lp+E q+i+r+l++F+++y++ np+ +e++d +++L++s+++L+td +n + ++kmt+++Fi n++  
  EPX73298.1 302 MKIALRRYLSDLPLKEIALDMALRKFLALFVLPQETQQIDRVLSSFSDQYYHCNPSFYESSDECYILTFSLMILHTDFYNINNRQKMTKSEFIANTNL- 399
                 334799*****************************************************************************************962. PP

                 BTTB---HHHHHHHHHHHHHS- CS
        Sec7 161 ndgkdlpeefLeeiYdsIkeee 182
                     ++  e+Le  Yd+I+ ++
  EPX73298.1 400 ---PNIMPEILECFYDNITYTP 418
                 ...45999**********8765 PP

>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.2   0.0         3   1.8e+04      62      81 ..      29      48 ..      19      58 .. 0.66
   2 ?   -1.6   0.1      0.64   3.8e+03      38      90 ..     160     224 ..     130     229 .. 0.57
   3 !   35.0   0.1   2.7e-12   1.6e-08      16     103 ..     561     672 ..     546     674 .. 0.82

  Alignments for each domain:
  == domain 1  score: -4.2 bits;  conditional E-value: 3
                TSSSSTSEEEEEESTSSSTE CS
          PH 62 edpkrkfcfelriverngsr 81
                +++k+k+ f+  ++ ++g+r
  EPX73298.1 29 RKSKKKNAFQSAFHRSKGKR 48
                47788888887777666644 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.64
                 CTTESSEEEEEESTTEEEEEEEC.........TTSSSSTSEEEE....EESTSSSTEEEEEEESSH CS
          PH  38 sekdkepkgsislsncevvevva.........tedpkrkfcfel....riverngsrtyllqasse 90 
                 s+ +++p  + +lsn++ +++ +          +  + k +f +    r +++++  +y+++++s+
  EPX73298.1 160 SSNNETPAPVTDLSNISQRSTLDelavstlsiLPLQTSKTSFFVgspsRSSTESN-GSYIFRTKSS 224
                 6777888888888888888766444444444433222222222244443333333.6666666665 PP

  == domain 3  score: 35.0 bits;  conditional E-value: 2.7e-12
                 C...SEEEEEEEEETTEEEEESST.........................TCTTESSEEEEEESTTEEEEEEECTTSSSSTSEEEEEESTSSSTEEEEEE CS
          PH  16 k...swkkrwfvLkdsellyyknd.........................ksekdkepkgsislsncevvevvatedpkrkfcfelriverngsrtyllq 86 
                     s ++  +vL++s+l+++kn                          +s ++ +p  +i+lsn++  +++ ++d +  ++f +  +++n  +ty ++
  EPX73298.1 561 DktvSGREVGVVLTSSKLMFFKNTswveglisqfhefqsstkspphyftPSLTSLDPDYIIPLSNLVAFHEK-KNDNDGSYSFII--KQKNT-STYMFS 655
                 33456678889**********************************************************976.556666666666..54477.****** PP

                 ESSHHHHHHHHHHHHHH CS
          PH  87 asseeerkeWikaiqsa 103
                 + se e+++Wi+  + +
  EPX73298.1 656 TGSEHEMNDWIYKVNFV 672
                 ***********998765 PP

>> PH_9  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.3   0.0   5.1e-09   3.1e-05      27     119 .]     567     674 ..     546     674 .. 0.67

  Alignments for each domain:
  == domain 1  score: 24.3 bits;  conditional E-value: 5.1e-09
        PH_9  27 kevyavlkklvLylykdee............esesaetedlks............lknakllgkirlhhaLaek.asdYkkkshvFrLqtadgaeylfq 100
                 +ev +vl    L+++k+ +            +          s            l    +  +i l+   a +  ++ +  s+ F +++++ + y+f 
  EPX73298.1 567 REVGVVLTSSKLMFFKNTSwveglisqfhefQ----------SstkspphyftpsLTSLDPDYIIPLSNLVAFHeKKNDNDGSYSFIIKQKNTSTYMFS 655
                 55666666666666666555544444333221..........2222234444444666667778888887777733334458999************** PP

        PH_9 101 tsdakevqeWvdtiNyvAA 119
                 t+++ e++ W+ ++N+v A
  EPX73298.1 656 TGSEHEMNDWIYKVNFVSA 674
                 *****************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (929 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       701  (0.0390987); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.68u 0.29s 00:00:00.97 Elapsed: 00:00:00.47
# Mc/sec: 5886.61
//
Query:       EPX73299.1  [L=130]
Description: yippee-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.1e-13   48.7   0.4    8.5e-13   48.4   0.4    1.1  1  Yippee-Mis18  Yippee zinc-binding/DNA-binding /Mis18, centrom


Domain annotation for each model (and alignments):
>> Yippee-Mis18  Yippee zinc-binding/DNA-binding /Mis18, centromere assembly
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.4   0.4   4.8e-17   8.5e-13       3      88 ..      14     103 ..      12     116 .. 0.86

  Alignments for each domain:
  == domain 1  score: 48.4 bits;  conditional E-value: 4.8e-17
                   EEETTTS-EEEECCCEEE...EECCCEEEES---CCCEEEECEEEETTSTTEEEEEEEETTT--EEEEEEEECSCC.CCCCCTCEEEEGG CS
  Yippee-Mis18   3 fqCkkCktilgdslqlvs...egralnivvlkkvtrnvvvgkelvtdeegkctystlsCkgCnsvlGwkYksteee.lkykrglfiletk 88 
                   + C +Ckt+l+ + +l+s   +gr+ +  ++kk+++ + +++ ++   +gk+++ +++C  C++++GwkY+ + +   kyk+g +ile +
    EPX73299.1  14 YICIHCKTHLAFKGHLISrdyTGRYGRAALIKKIENVIEMQSVTEEMLSGKYIVRRVHCCRCHANVGWKYVFAYKPsEKYKEGAYILELN 103
                   67****************99988999999999998666655555555668899999****************99998**********976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       734  (0.0409393); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 948.19
//
Query:       EPX73300.1  [L=86]
Description: eukaryotic protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.6e-24   85.6   0.2      2e-24   85.4   0.2    1.1  1  DUF543         Domain of unknown function (DUF543)
  ------ inclusion threshold ------
        0.1   12.4   0.1       0.14   11.9   0.1    1.2  1  Histone_H2A_C  C-terminus of histone H2A


Domain annotation for each model (and alignments):
>> DUF543  Domain of unknown function (DUF543)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.4   0.2   2.2e-28     2e-24      12      73 ..       6      67 ..       1      68 [. 0.91

  Alignments for each domain:
  == domain 1  score: 85.4 bits;  conditional E-value: 2.2e-28
      DUF543 12 psesdldekwDaclsnllvkvglgllvGvvasvllfrrRaapvalGaGvGiGaAYtecsalF 73
                +se++l+ kwD+clsn++v++++gl++G++ s ++frr a+pv+ G+G+G+G+AY++c+a+ 
  EPX73300.1  6 SSEQSLNYKWDVCLSNMFVQSTVGLGIGIISSAIMFRRAAWPVWGGLGFGLGKAYADCNAKL 67
                34599*****************************************************9875 PP

>> Histone_H2A_C  C-terminus of histone H2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   1.6e-05      0.14      19      34 ..      71      86 .]      69      86 .] 0.93

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 1.6e-05
  Histone_H2A_C 19 PnIhkvLLpkktkkkk 34
                   P+Ih++L  +kt++kk
     EPX73300.1 71 PSIHQELQSNKTEEKK 86
                   9************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       314  (0.0175135); expected 358.6 (0.02)
Passed bias filter:                      250  (0.0139439); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 603.48
//
Query:       EPX73301.1  [L=81]
Description: hypothetical protein SOCG_05813 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       955  (0.0532657); expected 358.6 (0.02)
Passed bias filter:                      689  (0.0384294); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.28s 00:00:00.73 Elapsed: 00:00:00.46
# Mc/sec: 533.18
//
Query:       EPX73302.1  [L=711]
Description: tyrosine phosphatase Pyp2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.4e-57  194.2   0.1    3.2e-57  193.8   0.1    1.2  1  Y_phosphatase    Protein-tyrosine phosphatase
      5e-10   39.9   0.0    2.9e-08   34.2   0.0    2.7  2  Rhodanese        Rhodanese-like domain
    0.00038   20.3   0.0     0.0011   18.8   0.0    1.7  1  DSPc             Dual specificity phosphatase, catalytic doma
     0.0032   17.6   0.0      0.008   16.3   0.0    1.7  1  PTPlike_phytase  Inositol hexakisphosphate
     0.0033   17.4   0.0     0.0062   16.5   0.0    1.4  1  Y_phosphatase3   Tyrosine phosphatase family


Domain annotation for each model (and alignments):
>> Y_phosphatase  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  193.8   0.1     9e-61   3.2e-57       3     233 ..     457     692 ..     455     694 .. 0.89

  Alignments for each domain:
  == domain 1  score: 193.8 bits;  conditional E-value: 9e-61
                    GGSSSTTS-B-CTTEEEBTTTTTTTTEEEEEEEEECTEEEEEEEEE---GGGHHHHHHHHHHT..T--EEEEESBSEETTEESS---S-SSTSS.E CS
  Y_phosphatase   3 eknRykdilpydksrVklkssegpsdYInAnyikgykkekkyIatQgPlkstvedFWrmvwqe..kvkvivmLtsleekgrekcaqYwpeeeee.s 95 
                    +knRy+di+pyd++rV l +++++++YInA++i    +  +yIa Q+P  +t+ dFW+m+w++  +  vivmLt+l e+g+ekc  Y+p++++  +
     EPX73302.1 457 SKNRYTDIVPYDRTRVLLPHKDENHNYINASHI--VFDAAHYIASQAPQLDTLVDFWEMIWHNtgSDGVIVMLTDLFEAGNEKCVLYFPDDMHSlM 550
                    7*****************99999889*******..4568************************55578*********************9998834 PP

                    EEETTEEEEEE.EEEEEESSEEEEEEEEEETTTTEEEEEEEEEEESSS-SSSSGSCCHHHHHHHHHHHHHHSTTSS-EEEECSSSSHHHHHHHHHH CS
  Y_phosphatase  96 leygkikvtlkekekedekeyvlrelevkkkkeeseerevkqlqytnWpdhgvpesaksllklirkvekskeaksgpvvVhCsaGvgRtgtfvald 191
                    + + +++v+l ek + d+ ++  r++ +++++e +    v+++++ +W+d ++p +  ++++ ++ ++k +  ++gpv VhCsaGvgRtgt++al 
     EPX73302.1 551 QLTPTMSVELLEKVTLDDYRLECRTFCLRNSSEVK---VVRHYWFRTWTDGECPGTLPKVIDAVKYINKVR--NTGPVFVHCSAGVGRTGTYIALA 641
                    55567******888889999999999999887765...99*******************************..9********************** PP

                    HHHHHHHH.........HSE.EEHHHHHHHHHTTSTTSS-SHHHHHHHHHHH CS
  Y_phosphatase 192 illqqlea.........eee.vdvlqivkelrkqRpgmvqtleqyiflyevi 233
                     l+++  +         + +   v+q+v++lr +R++mvqt++q+ fly v+
     EPX73302.1 642 QLVDIPPSmlpkvanleD-SqDLVFQVVNTLRCHRMKMVQTFNQFRFLYSVA 692
                    999887765555554533.268999************************985 PP

>> Rhodanese  Rhodanese-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   0.0   8.2e-12   2.9e-08      11     106 ..      23     125 ..      13     126 .. 0.87
   2 ?    2.5   0.0     0.059   2.1e+02      49      87 ..     604     641 ..     573     660 .. 0.71

  Alignments for each domain:
  == domain 1  score: 34.2 bits;  conditional E-value: 8.2e-12
   Rhodanese  11 kgkvallDvRppeeYekghIpgAvnv..skdtlsrakkseapllelpeellel.gidnkktvvvycdgggraaaa...aallkklGykn.vsvldGGfk 102
                 +++v+++D R +  Y +gh+++A+nv  ++  l+r++++ ++  +++  +++  ++d+ + + +y++   + ++     + +++ Gy n ++vl  Gf+
  EPX73302.1  23 TKSVHIFDLRLRSNYTRGHVKNAINVslPSALLRRPSFDIGKAFACLNGIIKItDLDDLSSLFIYDAAIAGLNRIhdfIRKFRRGGYSNsIYVLSTGFE 121
                 45667***********************999****************************************6666243335557***999********* PP

   Rhodanese 103 awke 106
                 ++++
  EPX73302.1 122 EFAK 125
                 *976 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.059
   Rhodanese  49 apllelpeellelgidnkktvvvycdgggraaaaaallk 87 
                  p   +  +++++ ++n  +v v+c+ g + + ++ +l 
  EPX73302.1 604 LPKVIDAVKYINK-VRNTGPVFVHCSAGVGRTGTYIALA 641
                 4555555566665.99************99555544443 PP

>> DSPc  Dual specificity phosphatase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0     3e-07    0.0011      61      91 ..     609     638 ..     568     646 .. 0.78

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 3e-07
                 HHHHHHHHHHHTT-EEEEEESSSSSHHHHHH CS
        DSPc  61 eavefidkakqkgkkvlVHCqaGisRSatli 91 
                 +av++i+k+ ++ + v+VHC aG+ R++t i
  EPX73302.1 609 DAVKYINKV-RNTGPVFVHCSAGVGRTGTYI 638
                 455555555.56789*************976 PP

>> PTPlike_phytase  Inositol hexakisphosphate
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   2.2e-06     0.008     119     155 ..     609     644 ..     588     645 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 2.2e-06
                      HHHHHHHHTS-TT-EEEEE-SSSSHHHHHHHHHHHHH CS
  PTPlike_phytase 119 dalvsilkeapektalvfnCqmGrgRTTtamviatLl 155
                      da v++++++ ++ ++ ++C++G+gRT t++++a+L+
       EPX73302.1 609 DA-VKYINKVRNTGPVFVHCSAGVGRTGTYIALAQLV 644
                      43.568888888999*******************997 PP

>> Y_phosphatase3  Tyrosine phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   1.7e-06    0.0062     113     142 ..     613     642 ..     582     647 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 1.7e-06
  Y_phosphatase3 113 vfealadee.pvlfHCtaGKDRTGvlaalll 142
                     +++++++ + pv +HC+aG  RTG  +al +
      EPX73302.1 613 YINKVRN-TgPVFVHCSAGVGRTGTYIALAQ 642
                     4445555.36*****************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (711 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.46
# Mc/sec: 4680.82
//
Query:       EPX73303.1  [L=244]
Description: peroxisomal membrane protein Pex22 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.032   14.4   0.1      0.088   12.9   0.1    1.7  1  DUF3976   Domain of unknown function (DUF3976)


Domain annotation for each model (and alignments):
>> DUF3976  Domain of unknown function (DUF3976)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   4.9e-06     0.088      17      34 ..      10      27 ..       5      31 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 4.9e-06
     DUF3976 17 KRGFYKliGCLvVmliav 34
                K  FYK+i CL+ m ia+
  EPX73303.1 10 KNMFYKFIICLAFMQIAL 27
                677************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       769  (0.0428914); expected 358.6 (0.02)
Passed bias filter:                      576  (0.0321267); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.30s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 1661.56
//
Query:       EPX73304.1  [L=410]
Description: poly(A) polymerase Cid1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.5e-19   67.7   0.0    1.5e-18   66.7   0.0    1.6  1  PAP_assoc     Cid1 family poly A polymerase
    6.3e-06   26.4   0.0    1.4e-05   25.2   0.0    1.6  1  NTP_transf_2  Nucleotidyltransferase domain
  ------ inclusion threshold ------
      0.044   13.9   0.0      0.092   12.8   0.0    1.5  1  Polbeta       Polymerase beta, Nucleotidyltransferase


Domain annotation for each model (and alignments):
>> PAP_assoc  Cid1 family poly A polymerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.7   0.0   2.6e-22   1.5e-18       1      62 []     266     335 ..     266     335 .. 0.95

  Alignments for each domain:
  == domain 1  score: 66.7 bits;  conditional E-value: 2.6e-22
                 -HHHHHHHHHHHHHHT--TTTEEEECSS.T-EEEHHHHCGCS-.......SSEECESSSSEBEETTCCCC CS
   PAP_assoc   1 sLGeLLigFFeyYgreFdyenvvisirt.ggiltkkekgwesa.......eskernrfllaIeDPfeldn 62 
                 +LG+LL+gFF+yY+++F  ++ vi++++  g+ltk+ekgw+sa        +  ++r+ laIeDPfe+++
  EPX73304.1 266 TLGSLLHGFFRYYAYKFEPRDRVITFNRqDGVLTKQEKGWTSAtehtgsaDQIIKDRYILAIEDPFETTH 335
                 59************************666999**********9*******77889*************98 PP

>> NTP_transf_2  Nucleotidyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.0   2.4e-09   1.4e-05      13      93 ..      80     166 ..      65     168 .. 0.78

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 2.4e-09
                   TTSEEEEEHHHHCTTSCTTSSEEEEEEESTTCHHH....HHHEHHHHHHHHCCCEEECTTEEEEEE..CEEECCCCTEEEEEECEEE CS
  NTP_transf_2  13 pvakvvlfGSyarGtalkgSDiDllvvlpeevsre....kkeegleklaeiikfleellglevdlv..trekledpllvksileerp 93 
                   ++a ++ fGS + G alk SD+Dl+v++++    e      +e+l k  ++ kfl++ +   + l+  ++e +++ +++++ +++r+
    EPX73304.1  80 SDAVLASFGSLESGFALKHSDMDLCVLTESLEASEplapLFYEELVKEGFEGKFLQKARIPIIKLIgdEKERFGSGFQCDIGFNNRL 166
                   4888999**********************9965559999888899999999999999888888888777777776776666666665 PP

>> Polbeta  Polymerase beta, Nucleotidyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   1.5e-05     0.092      18      43 ..      86     111 ..      71     141 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.5e-05
                 EEEEEE-S------EEEEEEEESS-- CS
     Polbeta  18 lFGSrakgkareeSDiDlavllkekl 43 
                  FGS  +g a ++SD+Dl+vl+++ +
  EPX73304.1  86 SFGSLESGFALKHSDMDLCVLTESLE 111
                 5********************99873 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (410 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       600  (0.0334653); expected 358.6 (0.02)
Passed bias filter:                      518  (0.0288917); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.47
# Mc/sec: 2609.78
//
Query:       EPX73305.1  [L=3221]
Description: HECT-type ubiquitin ligase E3 Ptr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.3e-94  315.1   0.0      1e-93  314.2   0.0    1.5  1  HECT      HECT-domain (ubiquitin-transferase)
    4.1e-77  259.6   2.4      2e-76  257.4   0.4    5.2  6  DUF913    Domain of Unknown Function (DUF913)
    8.2e-43  147.2  22.9    1.1e-42  146.8   8.8    4.8  3  DUF908    Domain of Unknown Function (DUF908)
    2.6e-11   42.6  10.9    1.7e-08   33.6   0.1    3.6  3  UBM       Ubiquitin binding region


Domain annotation for each model (and alignments):
>> HECT  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  314.2   0.0   2.3e-97     1e-93       2     306 ..    2916    3220 ..    2915    3221 .] 0.96

  Alignments for each domain:
  == domain 1  score: 314.2 bits;  conditional E-value: 2.3e-97
                  HHHHHHT-GGGSSEEESSTTSSSEEE-TTHHHHS.....HHHHHHHHHHHHHTT--BSS-B-HHHHHHHTT-.---TCHHHHH-HHHHHHHHHHH.. CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT    2 llskelldpklglfeeesedsgtlypkpssseee.llklfeflGkvlGkaiyeeilldlpfsraflkfllgeekitledleeidpelakslkellsl 97  
                  +l++++++p++ lf   + d+ t++p+++ss +  +l+ f+f G+++Gk++y+++lld +fsra++k++l+ + ++++d+e++dp++ ksl ++l  
  EPX73305.1 2916 VLARQMFNPDYALFLPVAGDATTFHPNRDSSVNPdHLSFFKFTGRIIGKSVYDGRLLDCHFSRAVYKHMLH-RSVSVKDIESLDPDYCKSLVWML-- 3009
                  689***********999***********98776697899********************************.7**********************.. PP

                  HS-GGG...GT-BSEEEEE.TTEEEEEESSTTGGGSB--TTTHHHHHHHHHHHHHTGGGHHHHHHHHHHHHTTS-HHHHTTS-HHHHHHHHBCSSS. CS
                  xxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT   98 esnteevedlaLtFtipen.agasatieLipnGanipVtnenkkeYiklyvnyllkksvekqleaflkGfsevipskalklfdaeelellisGedel 193 
                  +++ +++  +  +F+++++ +g+++ ++LipnG+nipVt+ nk++Y++++v+y+l +sv+ ql+++l+Gfs++ip +++++f+++elellisG  e 
  EPX73305.1 3010 NNDITDI--ITEEFAVEKDvFGEKTIVDLIPNGRNIPVTELNKHDYVNRMVDYKLVESVKDQLQSLLEGFSDIIPPNLIQIFNEQELELLISGLPE- 3103
                  5555444..666*****99****************************************************************************9. PP

                  --HHHHHHTEEEETT--TTSHHHHHHHHHHHHS-HHHHHHHHHHHHSSSS--TTCGGG-.....B--EEEEE-S..-TTS--EEEGGGTEEEE---S CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT  194 idvedlrrnteykggynaesetiewlweilkefspeekrlfLqFvTgssrlPlgGfael.....hpkftierkskedetrLPtahTCfnlLklpdYs 285 
                  id +d+r+ntey +gyn +s++i+w+w+++++f++ee++++LqF+Tg+s++Pl+Gf+el      ++f i+++   + +rLP++hTCfn+L+lp+Y+
  EPX73305.1 3104 IDNDDWRNNTEY-HGYNVSSPQIQWFWRAVRSFDEEERAKLLQFATGTSKVPLNGFKELegmsgFQRFNIHKSY-GSLNRLPQSHTCFNQLDLPEYE 3198
                  ************.67********************************************9999999******77.9********************* PP

                  SHHHHHHHHHHHHHHH.H--XX CS
                  xxxxxxxxxxxxxxxx.xxxxx RF
        HECT  286 skeilkekLltAieet.egFel 306 
                  ++e+l+  LltAi+e+ egF++
  EPX73305.1 3199 TYEQLRTMLLTAINEGsEGFGF 3220
                  ********************97 PP

>> DUF913  Domain of Unknown Function (DUF913)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  257.4   0.4   4.5e-80     2e-76       2     257 ..     436     684 ..     435     692 .. 0.96
   2 !   12.9   0.1   8.8e-06      0.04     322     367 ..     695     740 ..     687     741 .. 0.91
   3 ?   -3.4   0.1      0.78   3.5e+03     326     357 ..    1387    1418 ..    1379    1422 .. 0.73
   4 ?    0.7   0.2     0.044     2e+02     237     348 ..    1489    1601 ..    1477    1607 .. 0.62
   5 ?   -7.2   4.8         4   1.8e+04     299     299 ..    1934    1934 ..    1834    2003 .. 0.55
   6 ?   -1.4   0.8       0.2     9e+02     269     313 ..    2188    2232 ..    2157    2248 .. 0.45

  Alignments for each domain:
  == domain 1  score: 257.4 bits;  conditional E-value: 4.5e-80
      DUF913   2 ravrvlDtlitniqnafqafanakgldalidrledevdealeevkegkgtpaelrssvvdyeipfqrqqlLKslLkfikhlmqssgsgtdrllrnlids 100
                 r +++lD+li++++ af  f++ kgld l+ rl++e +++l +vk+g+g  +   +  +dy ip+ r  lLK lLkfi hl+q   +g    lrnlids
  EPX73305.1 436 RSISMLDHLIDGYSMAFPDFSESKGLDLLVTRLQFELEASLHDVKSGRGNAEI--CLNMDYAIPYDRYFLLKNLLKFILHLIQ--TGGSVVELRNLIDS 530
                 66889*****************************************7665544..4458************************..999999******** PP

      DUF913 101 sqLlksLrkIienakvfGssvwslAvnilsdfihnePtslavlqeaglteslLeallakgilpsrEvlasiPnvlsalcLNnaGlelfksskaleslfe 199
                 s L++sL   + + +vfGs+++  A+ni+s+fihnePt++ +++e++l++s+Lea +++ il s ++++siP +++a+cLN++G +lf + +++ ++f+
  EPX73305.1 531 S-LISSLAFLLDHHEVFGSNLFASATNIMSTFIHNEPTCYGIIHEKKLSHSFLEA-VNRRILNSCDAITSIPLAFGAICLNSQGFNLFLEKNPVPHFFS 627
                 *.*****************************************************.******************************************* PP

      DUF913 200 ifespehvkamesdgdlasnlGssfdELvRhhpsLktaiikavikmlarvvelgkeka 257
                 if+s +h+ka+ s +d+a+ lG+ +dEL+Rh+p Lk+ i+k++++++ +v++l ++++
  EPX73305.1 628 IFTSYNHCKAL-SSSDNAAILGTYIDELMRHQPFLKDGIVKMIFETVDKVCDLLRTFN 684
                 ***********.****************************************998876 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 8.8e-06
      DUF913 322 slldyilnvakFLeallsnnslcreFvekgGiellldlltlpslPy 367
                 ++l y+  +++FLe+++sn+ +++++++kg i+ +l+l+++p l y
  EPX73305.1 695 PYLIYFETFSSFLENIISNEGHAKNLMSKGIITHILKLMQVPVLAY 740
                 56779999**********************************9976 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 0.78
      DUF913  326 yilnvakFLeallsnnslcreFvekgGielll 357 
                  +++ +++++  l  n ++++ F++++G+++l 
  EPX73305.1 1387 VVTSAMRLILLLTANYDMVHMFIDSNGLDVLF 1418
                  56777777777788888888888888888775 PP

  == domain 4  score: 0.7 bits;  conditional E-value: 0.044
      DUF913  237 aiikavikmlarvvelgkeka...akllved....assasskseasssssssetkeeekssededvemedaeeetesesdeseeseeekeknslldy 326 
                  ++++ +ik + ++ +++ + +    +          +  s+++ +s++s  s+t++++  ++  d+ me++  +++ + +++ +se ++e+ ++  y
  EPX73305.1 1489 DAFQKIIKETCQLAHFAPNADhhyLE----LketlPEAYSKDQINSDASLMSQTSSKVI-TSLLDEIMETV--DSQRKMQKPVDSEFKPESDPMYMY 1578
                  45666666666666666666643222....12344444445555555554444444443.44455566666..334444556778888999999999 PP

      DUF913  327 ilnvakFLeallsnnslc.reFv 348 
                     + ++L+ lls  + c + F+
  EPX73305.1 1579 NVFLLQCLTELLSGYDSCkKCFM 1601
                  99999*******99888845566 PP

  == domain 5  score: -7.2 bits;  conditional E-value: 4
      DUF913  299 d 299 
                  d
  EPX73305.1 1934 D 1934
                  1 PP

  == domain 6  score: -1.4 bits;  conditional E-value: 0.2
      DUF913  269 sskseasssssssetkeeek.......ssededvemedaeeetesesdesee 313 
                  ++++ +s+ +++       k       ++ed dv++++ +e +  +++e+e+
  EPX73305.1 2188 EESERQSQPKNE-------KpadvgapETEDPDVQNSEMNEMEGVRTEEPEP 2232
                  111111111111.......122345555555555444442222222222211 PP

>> DUF908  Domain of Unknown Function (DUF908)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  146.8   8.8   2.4e-46   1.1e-42       4     355 ..      94     373 ..      91     376 .. 0.89
   2 ?    0.3   1.4      0.08   3.6e+02     148     222 ..    2186    2257 ..    2180    2293 .. 0.55
   3 !    4.2   0.2    0.0055        24     134     207 ..    2548    2611 ..    2495    2699 .. 0.70

  Alignments for each domain:
  == domain 1  score: 146.8 bits;  conditional E-value: 2.4e-46
      DUF908   4 elvlaiLrftrlLLenCgNrsiYnSsehLndLLnttdldvllatLrlllrlaqrysasnkrtksasrtvqqallanhynisldrllklAqpfpktpvsd 102
                  ++l++Lrf+  LL++C NrsiYnS   L +LLn++ l++l+atL lll ++q+ +   +r++++            +++s+drl  + + +p+  +++
  EPX73305.1  94 TVLLEVLRFSTYLLKHCANRSIYNSTGYLEQLLNSSELEILDATLGLLLHIVQKATI--SRRGKQ-----------LFSLSQDRLFRFLSFLPQEATKS 179
                 6899*************************************************9999..554444...........6899**********999995444 PP

      DUF908 103 ssakaasekkastteyaldlvslakedskvlpsewgdvkvtYYkkssseeqkaesksskeeaseslissspstPtplrrssklgktssspsspaktstp 201
                                 a +  s++  ++ + p  w++++++YYk+sss+ ++++++            ss+s+                          
  EPX73305.1 180 --------------GLAQNYESILFLND-I-PAPWCSLEFSYYKSSSSKVSDSSKTG-----------SSTSS-------------------------- 225
                 ..............34445556666555.4.999***********999776543322...........12233.......................... PP

      DUF908 202 skaaksqeglktfeipesevsskslyellakave..kiPkesryellhririakalnssseeRqqllaiRllAitnlayihpesefqtkllkqdpdlvy 298
                      ++egl++++++ +e+s k++++ll +     +iP+++  ++l  i + k l + ++ R+++++i llA++nl+y+  ++++q++++ +dp+++ 
  EPX73305.1 226 -----PSEGLRVLKVSPEELSVKPVHDLLVQLSTenQIPEQNTPDFLISILLHKNLPDLNK-RRTMVRIGLLALSNLVYA-HSQAVQSRFMLADPEITT 317
                 .....3689***********************999**********************6666.******************.56899************* PP

      DUF908 299 qLaeLihpeesevprelqtaaleaLealarkkaklsdvlsaLnanvnhGiLlyvlRk 355
                 +La L++ + +++p+e +++++e+ +a+  +k+ +  vl+aLn++v++G+++ ++R 
  EPX73305.1 318 HLATLVSVD-TKLPQEFKAVVFECFKAFFFRKNMVPSVLAALNVSVSYGLMMNLVRD 373
                 *********.*********************************************96 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.08
      DUF908  148 ssseeqkaesksskeeaseslissspstPtplrrssklgktssspsspaktstpskaaksqeglktfeipesev....s 222 
                  +++e+    + +s++++++  +  +p+t+ p  ++s++++    +   +++++p ++a+++++ +t+ i  + v     
  EPX73305.1 2186 EKEES----ERQSQPKNEKPADVGAPETEDPDVQNSEMNE---MEGVRTEEPEPVQEANTADEGQTISIRGRDVnvssL 2257
                  22222....2223333333344789999999999999986...234444556666666677777788888877744330 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.0055
      DUF908  134 psewgdvkvtYYkkssseeqkaesksskeeaseslissspstPtplrrssklgktssspsspaktstpskaaks 207 
                   s + +  +++Yk+++++e+  + ++ ++++     +s+ +tP + + s++++k+ ++p++p      ++ +++
  EPX73305.1 2548 LSTLTRPLLSFYKHQKPAEELNQVSEDRDDTG----NSDVNTPRTDESSAQVEKKGKKPTNP------PQITDD 2611
                  5667777789*******999877766665544....34666776666666665532233333......333333 PP

>> UBM  Ubiquitin binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.3      0.28   1.3e+03      19      26 ..    1674    1681 ..    1674    1682 .. 0.87
   2 !   33.6   0.1   3.8e-12   1.7e-08       6      33 ..    2256    2283 ..    2252    2284 .. 0.91
   3 !   13.4   1.4   8.6e-06     0.039      10      30 ..    2296    2316 ..    2290    2320 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.28
         UBM   19 pdLReEVL 26  
                  ++LR+EVL
  EPX73305.1 1674 DELRREVL 1681
                  59*****9 PP

  == domain 2  score: 33.6 bits;  conditional E-value: 3.8e-12
         UBM    6 pegiDpsFLaaLPpdLReEVLaqqdeeq 33  
                    giDp+FL aLP+d+ReEV  q+ +e+
  EPX73305.1 2256 SLGIDPTFLLALPEDMREEVVFQHIQER 2283
                  578***********************97 PP

  == domain 3  score: 13.4 bits;  conditional E-value: 8.6e-06
         UBM   10 DpsFLaaLPpdLReEVLaqqd 30  
                  DpsFL+ LP d+R E L q++
  EPX73305.1 2296 DPSFLEVLPTDIRDELLFQEA 2316
                  9******************73 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (3221 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       884  (0.0493056); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.47u 0.37s 00:00:01.84 Elapsed: 00:00:00.57
# Mc/sec: 17084.74
//
Query:       EPX73306.1  [L=183]
Description: U3 snoRNP-associated protein Imp3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      2e-13   49.8   0.0    4.2e-13   48.8   0.0    1.5  1  S4            S4 domain
    2.4e-08   34.7   2.8    3.6e-08   34.2   2.5    1.6  1  Ribosomal_S4  Ribosomal protein S4/S9 N-terminal domain


Domain annotation for each model (and alignments):
>> S4  S4 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.8   0.0   4.7e-17   4.2e-13       1      46 [.     109     154 ..     109     156 .. 0.96

  Alignments for each domain:
  == domain 1  score: 48.8 bits;  conditional E-value: 4.7e-17
                 EEHHHHHHHTTSSSSHHHHHHHHHTTTEEETTEEE--TT-EE-TTC CS
          S4   1 rRLdkvlarlglassrreArqlIehGrVlVNGkvvkdpsyrVkpgD 46 
                 rRL +++++l++  +++ A +lIe+G+V+V   v++dp+y V+ + 
  EPX73306.1 109 RRLPVIMCKLRMSQTISAATKLIEQGHVRVGPHVITDPAYLVTRNL 154
                 8*****************************************9875 PP

>> Ribosomal_S4  Ribosomal protein S4/S9 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   2.5     4e-12   3.6e-08       2      80 ..       4      63 ..       3     107 .. 0.93

  Alignments for each domain:
  == domain 1  score: 34.2 bits;  conditional E-value: 4e-12
                  T-S-CHHHHCHCTS-STSSSS-S-SSTTTTS-----CHCH..HHHHHHHHHHHHT-S.HHHHHHHHHHHHHCCSHHHHHHHH CS
  Ribosomal_S4  2 ykgpkckllRrvgfklflkgreyppGqhgkrrkklseYgk..qlrekqklkrrYgll.ekqfrryfkearrirGktgenLlq 80
                  +k++++kll++v+f                      +Y++  ++++   ++rrY++  ++++++y+  ++++r +++++++ 
    EPX73306.1  4 LKHHEQKLLKKVDFL---------------------NYKQddNNHRDLMVMRRYHIPkREEYQKYNIVCGKFR-QLAHRISL 63
                  69*************.....................****999******************************.****9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       546  (0.0304535); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1360.70
//
Query:       EPX73307.1  [L=105]
Description: DNA replication factor C complex subunit Ctf8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-13   50.5   0.9    1.6e-12   47.9   0.9    2.0  1  Ctf8      Ctf8


Domain annotation for each model (and alignments):
>> Ctf8  Ctf8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.9   0.9     9e-17   1.6e-12      35     142 .]      20     103 ..       7     103 .. 0.88

  Alignments for each domain:
  == domain 1  score: 47.9 bits;  conditional E-value: 9e-17
        Ctf8  35 eakaqetveevkiGrldfpdyspeaedtkwmkrvyLyvgkhQrLtGevkkLakplavlrrrksekkeeeeeeeekeeeksseeeseeeleivdivkyki 133
                 +a++++++e+  iG l++        +++++k++++yvg++  ++G v+ L+kplavl+++                   +  +s +el+iv i+k +i
  EPX73307.1  20 QATVEKISETLDIGTLEI-------VQENNTKKASIYVGNQ-CMEGVVETLQKPLAVLQKSPV----------------GDGGSSARELNIVSIIKERI 94 
                 567888999999999999.......47899*********97.******************922................22568899************ PP

        Ctf8 134 ifssrPePv 142
                  fssrP+Pv
  EPX73307.1  95 RFSSRPLPV 103
                 ********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       402  (0.0224218); expected 358.6 (0.02)
Passed bias filter:                      320  (0.0178482); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 827.78
//
Query:       EPX73308.1  [L=380]
Description: Dhp1p-interacting protein Din1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.4e-28   97.3   0.0    1.1e-27   96.0   0.0    1.7  1  RAI1      RAI1 like PD-(D/E)XK nuclease


Domain annotation for each model (and alignments):
>> RAI1  RAI1 like PD-(D/E)XK nuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.0   0.0   6.1e-32   1.1e-27       1      67 [.     200     312 ..     200     313 .. 0.97

  Alignments for each domain:
  == domain 1  score: 96.0 bits;  conditional E-value: 6.1e-32
                 E-EESS---TTC................................................CSGGGEEEEEEEE---SHHHHHHHHHHHHHHHHHHHHHT CS
        RAI1   1 VDcvwdakpedt................................................nksehyvELKTskkiknekqlekferKllkfWaQSfLlG 51 
                 VDcvwd+kp++t                                                n+s+hy+ELKTskk+  + ++ +++rKllkfWaQS+LlG
  EPX73308.1 200 VDCVWDSKPGVTpdsdvdskvnddslksqtegqqeenlpaskrrkmdddndstdpsptveNPSPHYCELKTSKKQ--PLEHVGMRRKLLKFWAQSYLLG 296
                 9**************************************************************************..66667***************** PP

                 --EEEEEEE-TTSBEE CS
        RAI1  52 iprIvvGfRdddgilt 67 
                 i++Iv+GfR+ddg+l 
  EPX73308.1 297 IGTIVIGFRNDDGVLV 312
                 *************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (380 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       576  (0.0321267); expected 358.6 (0.02)
Passed bias filter:                      445  (0.0248201); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.21s 00:00:00.71 Elapsed: 00:00:00.37
# Mc/sec: 3046.29
//
Query:       EPX73309.1  [L=474]
Description: 4-aminobutyrate aminotransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   1.5e-106  356.5   0.0   1.7e-106  356.3   0.0    1.0  1  Aminotran_3    Aminotransferase class-III
  ------ inclusion threshold ------
      0.058   12.6   0.0      0.081   12.1   0.0    1.2  1  Aminotran_1_2  Aminotransferase class I and II


Domain annotation for each model (and alignments):
>> Aminotran_3  Aminotransferase class-III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  356.3   0.0  1.9e-110  1.7e-106       6     405 ..      48     473 ..      43     474 .] 0.94

  Alignments for each domain:
  == domain 1  score: 356.3 bits;  conditional E-value: 1.9e-110
                  B--SCEEEEEEEBTEEEETTS-EEEESSHHHHTTTT-BT-HHHHHHHHHHHTT-S---TTTCEEHHHHHHHHHH....HHHCT-..SEEEEESSHHHH CS
  Aminotran_3   6 ednlllvitkaeGvyltdvdgkrylDlvssiavvnlGhahPkvvkavkeqaaklshvsfgaltnepalklaekl....lklapkgldkvflansGseA 99 
                  + +++++++k+ G+yl+d+dg+ +lD++s+ia +++G+++P +++a+k+ +a++ +++++al+n p  ++a       ++ apkg   v + +sGs+A
   EPX73309.1  48 AVKFPVDYEKSVGNYLVDADGNVLLDVYSQIATIPVGYNNPTLLEAAKSDEAAIAMMNRPALGNYPPKNWATMAqegaIDFAPKGQKYVYYQMSGSDA 145
                  567789****************************************************************998888889******************* PP

                  HHHHHHHHHHHHHHTS...HCTT-.....................EEEEETTT---SSHHHHHHSS--TTTTTTCTTB...-TSEEEE-TTBGGGTB- CS
  Aminotran_3 100 vetAlKlarkyarekk...atekt.....................kiiafkgafHGrtlgalsvtgskkkyktlfgpf...lpevvrlkypdeevlke 170
                  +e+A+Kla+ y  ++    +                         ++++f+++fHGr++g+ls+t+sk+ +k ++++f   +++++ lkyp+e  + e
   EPX73309.1 146 NEVAYKLAMLYRFNNLprvN---GdfteeekttcmnnsspgspevAVLSFRHGFHGRLFGSLSTTRSKPVHKIGMPAFhwpQAHFPALKYPLEKYTTE 240
                  **********8877754330...245566678***********************************************999**************** PP

                  HHHHHHHHHHHHHHHHCHTCCCEEEEEE-SCETTTTSEB--CCHHHHHHHHHHHHT-EEEEE-TTTTTTTTSSSSGGGGC..TS--SEEEE-.GGGGT CS
  Aminotran_3 171 neeeeaalleelealekkkkdevaAvivEpiqgegGvvvaspeflaklrelckkhdvllivDEvqtGfGrTGklfAleha..gvspDlmtla.Kaltg 265
                  n+ ee++++ee+e++ ++++  +aA ivEpiq+egG+++as+ef++kl++  kkh+vl+ivDEvqtG+G TG+++A+eh+  +++pD++t++ K +++
   EPX73309.1 241 NQAEEDRCIEEVEHILNTHHCPIAACIVEPIQSEGGDNHASNEFFHKLQATLKKHNVLFIVDEVQTGMGSTGAMWAHEHWnlPTPPDMVTFSkKFQAA 338
                  ********************************************************************************88899*******9999** PP

                  T.SS-EEEEEEHHHHTTS-TTSB--TTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTT-.TTEEEEEEE..TTEEEEEEBCCCETT CS
  Aminotran_3 266 G.lplsavlataevmqalapgshgsTfgGnplacavalavleiieeekllenaqelgaalkegLeelqkky.evikevRgk..Glmiaielkeeaevk 359
                  G + +   l+++  +q +      +T++G+pl++  a ++ + i e++ll+n++ +g+ +++ Le+l++k+   i+++Rgk  G++ia++++++a ++
   EPX73309.1 339 GvYYHDKNLRPH-AYQHF------NTWMGDPLRAIQAKYIAKEIREKDLLQNVKTVGDFVYTSLEKLAEKHpGKINNIRGKgkGTFIAWDCESSAARD 429
                  *77777777776.58889......***********************************************99******98779************76 PP

                  CHHHHHHHHHCTEE-EEETTTEEEE---TT--HHHHHHHHHHHHHH CS
  Aminotran_3 360 ekeilkkakekGvlilsaGdnvirllppliitdeeidelleilkka 405
                    +++ ++k +G++i+++G  +irl+p+l++++++++ ll+++ + 
   EPX73309.1 430 --AFVGRMKMNGINIGGCGVAAIRLRPMLVFQQHHAEILLSKIDEL 473
                  ..9*************************************999875 PP

>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   9.1e-06     0.081     165     240 ..     280     348 ..     239     426 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 9.1e-06
                    --HHHHHHHHHHHHHTTEEEEEEETTTTCBSSSSHTHHH.HGGSTTSTTEEEEEESSSTTSSGGG-EEEEEE.EHHHH CS
  Aminotran_1_2 165 atleeleklldlakkynlllfvDeaYagfvfgsldavat.ranveeepnllivgslsKafGlaGeRvGyilg.naavv 240
                    a+ e  +kl ++ kk+n+l +vDe+  g+ ++   ++a  + n+ + p+   + ++sK f +aG     +++ +++++
     EPX73309.1 280 ASNEFFHKLQATLKKHNVLFIVDEVQTGMGSTGA-MWAHeHWNLPTPPD---MVTFSKKFQAAG-----VYYhDKNLR 348
                    5678889999***************999999865.44445999999999...99**********.....555344444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (474 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 3318.23
//
Query:       EPX73310.1  [L=259]
Description: DUF1770 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-10   42.3   2.9    2.9e-10   41.0   2.9    1.8  1  DUF1770   Fungal protein of unknown function (DUF1770)
  ------ inclusion threshold ------
       0.17   12.4   0.8       0.26   11.8   0.8    1.4  1  GOLD_2    Golgi-dynamics membrane-trafficking


Domain annotation for each model (and alignments):
>> DUF1770  Fungal protein of unknown function (DUF1770)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.0   2.9   3.3e-14   2.9e-10      23      99 .]      87     207 ..      31     207 .. 0.69

  Alignments for each domain:
  == domain 1  score: 41.0 bits;  conditional E-value: 3.3e-14
     DUF1770  23 taaskkepvtleekskk................ddesldskeeddeed........eipys....virpvsr..................rqtlpPlPD 75 
                 t+ s++ p++++++++                 ++e+++sk+e+  +d        e p++    +++p+ r                  + ++p +PD
  EPX73310.1  87 TQESTQVPIETNDSEEVtnsipdssdeaceeerEEEEIESKNEE--DDsvwesdysEAPTEpalaAVEPH-RgkafmspsssgtyesealEYNVPAIPD 182
                 33333333333333222444444434455444333333332222..223454444444433444466664.357888888899999999888******* PP

     DUF1770  76 LRFeqSYLkSiakA.dtwwkvaliT 99 
                 LRF++SYLkS+++A +++  + +iT
  EPX73310.1 183 LRFQNSYLKSLEQAnGSVPLICWIT 207
                 **************889999****9 PP

>> GOLD_2  Golgi-dynamics membrane-trafficking
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.8   2.9e-05      0.26      40      78 ..      96     133 ..      75     191 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.9e-05
      GOLD_2  40 teatskavsvkvsesddeedeeeeeeeekveeedvekgs 78 
                 ++ +s++v++ + +s+de  eee ee e++e+++ e  s
  EPX73310.1  96 ETNDSEEVTNSIPDSSDEACEEEREE-EEIESKNEEDDS 133
                 56799*************99999988.445555544443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       930  (0.0518713); expected 358.6 (0.02)
Passed bias filter:                      549  (0.0306208); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 1878.85
//
Query:       EPX73311.1  [L=1076]
Description: Smc5-6 complex SMC subunit Smc5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.1e-20   72.6  15.5    2.2e-19   69.8  15.5    2.5  1  SMC_N     RecF/RecN/SMC N terminal domain
    1.4e-17   64.8   6.0    1.4e-17   64.8   6.0    4.7  4  AAA_23    AAA domain
    0.00081   19.2  13.3    0.00081   19.2  13.3    3.5  2  AAA_15    AAA ATPase domain
      0.001   19.0   6.4     0.0078   16.0   0.2    2.9  3  AAA_21    AAA domain, putative AbiEii toxin, Type IV TA syste
     0.0025   17.5   0.0     0.0063   16.2   0.0    1.7  1  AAA_29    P-loop containing region of AAA domain
  ------ inclusion threshold ------
      0.037   13.6   0.0      0.037   13.6   0.0    4.0  5  AAA_27    AAA domain
      0.037   14.3   0.6       0.15   12.4   0.0    2.4  2  Ndufs5    NADH:ubiquinone oxidoreductase, NDUFS5-15kDa
      0.053   14.0   0.0      0.053   14.0   0.0    3.7  3  ABC_tran  ABC transporter
        0.1   13.1   0.5       0.43   11.0   0.1    2.4  2  AAA       ATPase family associated with various cellular acti
       0.56   10.5   3.0        5.5    7.3   0.0    3.3  3  AAA_22    AAA domain


Domain annotation for each model (and alignments):
>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.8  15.5   1.2e-22   2.2e-19       2     196 ..      24    1028 ..      23    1031 .. 0.98

  Alignments for each domain:
  == domain 1  score: 69.8 bits;  conditional E-value: 1.2e-22
                  EEEEEEESETTEECEEEEEETTSSEEEEEESTTSSHHHHHHHHHHHCTT.TTTTTTCHCCCCCC--BTTCSSTTEEEEEEEEEETTEESSSSSSCEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N    2 lkrleienFksyagktvilpfsksftaivGpNGSGKsnlldAilFvLGersakklrseklsdlihkskekasvkkaeveitfdnedkklkiekeevs 98  
                  + r+++ nF +y  +  +    + +++++GpNG GKs ++ Ai+  LG   +   r++++++ i++       ++a++e+ ++ ++++       v+
  EPX73311.1   24 IVRVKLVNFVTY--EYCEFYPGPYLNMVIGPNGTGKSTVVSAICLGLGWPPKLLGRAKEAREYIKY-----GKNSATIELELKLKNNN------TVT 107 
                  668889999999..6888999999*******************99999766655699********9.....56778888876666665......79* PP

                  EEEEEETTSEEEEEETTEEE-HHHHHHHHHCTT-STT............................................................ CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............................................................ RF
       SMC_N   99 isrrvkrkgeseykingkevtkkevsellesagiske............................................................ 135 
                  i+r + ++++s++ +n++ ++ + +s+l+e+ +i+ +                                                            
  EPX73311.1  108 ITRVINQDKSSSFSLNKEACSASAISHLMEKFNIQLNnlchflpqdrvaefaqldpftrlieteraidydgllldheklidlrreekdamlykdqgq 204 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX73311.1  205 ntlnsikerqqalekevkifkdrekiqsylgvlaiakdlviyrektvtynqlrekkreikdqlkqfieesrpvlsltdqfqsdlqdkkeafnqlsss 301 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX73311.1  302 llvfkqhtekeklsvskymenekriyekinsnrallktsqaavqeaqraldgllgmmgpkpseqnfeathqrmqelnseklryeneklecshalgsi 398 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX73311.1  399 rtskaqkllgidnlrrelnayndltrrklkyiattpgwedafhtyqilkenestfeeaaygpiymhlecrdkkiapliegffradtfrtfvmsnynd 495 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX73311.1  496 ylklmdlitsktrytptvrefssernkrlsdfqyicsrdklksfgfdgylidylegpevvlvalchmlkihqipvaekelstasvnalnnyrlpngd 592 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX73311.1  593 pvfksylagssihlvfrsaygnreltqrtdplpsnsvyfsesvepslvkekeeqlnsqtsglnelqanesklqnkvgecdaliseanesitnlrker 689 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX73311.1  690 deklvplrewqalndkanhqrlvldqrkknpgqyerelenskelrrencmalmdsitklkdwntkatiefektlgsrlnvieaeyrlqkheldaeqv 786 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX73311.1  787 ntmmrelhdkqqetsariaearkdametynsvverlqnedqerqtsiteesenfstvsevenkisveetklgfmnvnnfvmeqydrrkleieelemk 883 
                  ************************************************************************************************* PP

                  .................................................................................CS-HHHHHHHHHHHHH CS
                  .................................................................................xxxxxxxxxxxxxxxx RF
       SMC_N  136 .................................................................................lLSgGektLvalaLlf 151 
                                                                                                     SgGe++++ +  l+
  EPX73311.1  884 lsrldetilstqekiedikrvwlvklegvieciterfsksmssmgyagevrlgkaedfdkwridimvqfreaeglqkltgqRQSGGERSVSTIMYLL 980 
                  *********************************************************************************99************** PP

                  HHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTT...SEEEEE- CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxx RF
       SMC_N  152 AiqkvkpaplyllDeidaaLDeknvkkvaellkekskn...aQfivis 196 
                  A+q v  ap+ ++Dei++ +D +n + v + + +++ +   +Q++ ++
  EPX73311.1  981 ALQGVATAPFRIVDEINQGMDPRNERVVHSHIVNSTCEtpsSQYFLVT 1028
                  **************************9998887655332347777665 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.8   6.0     8e-21   1.4e-17       1     199 [.      26     221 ..      26     273 .. 0.65
   2 ?   -9.2  20.3        10   1.8e+04      95     176 ..     244     352 ..     221     431 .. 0.52
   3 ?   -7.9  11.9        10   1.8e+04     145     189 ..     637     686 ..     604     737 .. 0.52
   4 ?  -12.4  23.0        10   1.8e+04      62     196 ..     710     895 ..     700     904 .. 0.44

  Alignments for each domain:
  == domain 1  score: 64.8 bits;  conditional E-value: 8e-21
      AAA_23   1 kLkienfrsfrdqeidFskgltlItGpNGaGKTTildAiklaLygetprlsrksgrgfeksdveiesegkvkayveltfenkdgrytrsiererelskk 99 
                 ++k+ nf  ++  e+  ++ l+ ++GpNG+GK+T++ Ai+l+L+  ++ l+r ++    ++ ++    gk++a +el+++ k++    +++ +r  +++
  EPX73311.1  26 RVKLVNFVTYEYCEFYPGPYLNMVIGPNGTGKSTVVSAICLGLGWPPKLLGRAKE---AREYIK---YGKNSATIELELKLKNN---NTVTITRVINQD 115
                 68899****************************************8877777654...555555...45778888888877777...569889998888 PP

      AAA_23 100 kgkttkkaklelleideleqfisellgskkiil.nlilflgqerfeefelkdkke.................................rleelekelee 164
                 k+++     ++l +++ +   is+l+++++i+l nl+ fl+q+r +ef++ d++                                             
  EPX73311.1 116 KSSS-----FSLNKEACSASAISHLMEKFNIQLnNLCHFLPQDRVAEFAQLDPFTrlieteraidydgllldheklidlrreekdamlY---------- 199
                 7533.....334444555678**********9989999******888998888886666666665666555555555555543334431.......... PP

      AAA_23 165 ledekkllekleqekekekeleeleeeleeilkel 199
                              + + +++l+ ++e+++ ++ke+
  EPX73311.1 200 -------------KDQGQNTLNSIKERQQALEKEV 221
                 .............2233333333333333333322 PP

  == domain 2  score: -9.2 bits;  conditional E-value: 10
      AAA_23  95 elskkkgkttkkaklellei.deleqfise.............llgskki.....ilnlilflgqerfeefelkdkkerleelekeleeledekkllek 174
                   +++k++t+++  +++ ei d+l+qfi+e              l+ kk+     +++l++f++  ++e+++ +   + +e+ ++ +e+++  + ll++
  EPX73311.1 244 VIYREKTVTYNQLREKKREIkDQLKQFIEEsrpvlsltdqfqsDLQDKKEafnqlSSSLLVFKQHTEKEKLSVS---KYMENEKRIYEKINSNRALLKT 339
                 44555555555555555544455555555544443333322224444444566554455555555555444443...2333333333333333333333 PP

      AAA_23 175 l...........e 176
                              
  EPX73311.1 340 SqaavqeaqralD 352
                 3222222222230 PP

  == domain 3  score: -7.9 bits;  conditional E-value: 10
      AAA_23 145 efelkdkkerleelekeleeledekkllekl............eqekekekeleele 189
                 + + k+k+e+l++ +  l+el++ +++l+++            e        +++l+
  EPX73311.1 637 PSLVKEKEEQLNSQTSGLNELQANESKLQNKvgecdaliseanE-------SITNLR 686
                 33334444444444444444444333333333444433222220.......222222 PP

  == domain 4  score: -12.4 bits;  conditional E-value: 10
      AAA_23  62 dveiesegkvkayveltfenkdgry.................trsiererelskkkgkttkka....klelleideleqfisellgskkiilnlilflg 139
                    + +++k+++++e+++en ++ +                 +++ + e+e++ ++  ++ +a    ++ +l+ ++ + +++el +++++ + +i+   
  EPX73311.1 710 RLVLDQRKKNPGQYERELENSKELRrencmalmdsitklkdwNTKATIEFEKTLGSRLNVIEAeyrlQKHELDAEQVNTMMRELHDKQQETSARIAEAR 808
                 444566678888888888887776688888877776555544222222222222222222222222255566667777777776666555444443333 PP

      AAA_23 140 qer...........feefelkdkkerleelekeleeledekkllekl........................eqekekekeleeleeeleeil 196
                 ++            +     ++++er  ++++e e  +++ +  +k                         ++++e e +l+ l e++ +++
  EPX73311.1 809 KDAmetynsvverlQ-----NEDQERQTSITEESENFSTVSEVENKIsveetklgfmnvnnfvmeqydrrkLEIEELEMKLSRLDETILSTQ 895
                 333333333322110.....222222222222222222222211111333333344444466665554444333344444444444444444 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2  13.3   4.5e-07   0.00081       3     256 ..      24     337 ..      23     456 .. 0.58
   2 ?  -11.8  21.3        10   1.8e+04     172     317 ..     719     875 ..     624     932 .. 0.45

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 4.5e-07
      AAA_15   3 IkkikikNFRslkdveidlseeltvliGkNnsGKSsilealdlFlnnkekknkkvikiekedleifeniseskdikIdvef.................. 83 
                 I ++k+ NF  ++++e    ++l+ +iG+N++GKS+++ a+ l l        k +  +ke  e+ ++ ++s +i+++++                   
  EPX73311.1  24 IVRVKLVNFVTYEYCEFYPGPYLNMVIGPNGTGKSTVVSAICLGLGWP----PKLLGRAKEAREYIKYGKNSATIELELKLknnntvtitrvinqdkss 118
                 77899*************9999*******************6666644....33455556666666666666666666666557777777777777777 PP

      AAA_15  84 .......................................aekekakeyektlkskekkkadlllkkkesdlkktikdkklklkknelsdekisvekkks 143
                                                            + + + ++ +++++  +d+ll + e+ ++ + ++k+  l+k++ ++   s++++++
  EPX73311.1 119 sfslnkeacsasaishlmekfniqlnnlchflpqdrvaeF--AQLDPFTRLIETERAIDYDGLLLDHEKLIDLRREEKDAMLYKDQGQNTLNSIKERQQ 215
                 7777777788888888888888888888888887775430..333333333334444444445555555566666666666666666666666666666 PP

      AAA_15 144 kkelpkekeeklekekeelkidkedlkklikkleeslkkee..........elknvlksaiiklllisakRnvsd..edsekkssllgklkekileeal 230
                 + e +++  +++ek +  l +    ++ +i+  e+ +++++          +          + ++i++ R v +  ++ ++    + +++++++++ l
  EPX73311.1 216 ALEKEVKIFKDREKIQSYLGVLAIAKDLVIY-REKTVTYNQlrekkreikdQ----------LKQFIEESRPVLSltDQFQSDLQDKKEAFNQLSSSLL 303
                 6444444444444444444444444444444.44555555534333322222..........2333333333333112222222222222222222222 PP

      AAA_15 231 qekl........eeelteklkeiqeklkeidkkl 256
                   k+          +  e+ k+i ek++     l
  EPX73311.1 304 VFKQhtekeklsVSKYMENEKRIYEKINSNRALL 337
                 2222332222342223333333333333322222 PP

  == domain 2  score: -11.8 bits;  conditional E-value: 10
      AAA_15 172 likkleeslkkeeelknvlksaiiklllisakRnvsdedsekkssllgklkekileealqekl...............eeelteklkeiqeklkeidkk 255
                    ++e  l+ ++  +   ++ + +++ i + ++ +++ + + +++lg+ ++ i  e+ + +                +           +k +e++  
  EPX73311.1 719 NPGQYERELENSK--ELRRENCMALMDSITKLKDWNTKATIEFEKTLGSRLNVIEAEY-RLQKheldaeqvntmmrelH-----------DKQQETSAR 803
                 3333333333333..2233444555555555555555555555555555555554432.11112234222333321111...........111111111 PP

      AAA_15 256 laeelk...kilkkkidkikkfnykgkkneeieik.......ddeelplnknGsGvqrllllillileaekk 317
                 +ae  k   +++++ ++ ++++   ++++ + e +        ++++++++  +G+++   +++++++ +k 
  EPX73311.1 804 IAEARKdamETYNSVVERLQNEDQERQTSITEESEnfstvseVENKISVEETKLGFMNVNNFVMEQYDRRKL 875
                 111111222222222222222211111111111112233445555555555555555555555555555444 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.2   4.4e-06    0.0078       1      19 [.      46      64 ..      46     123 .. 0.85
   2 ?   -2.1   0.3       1.5   2.7e+03     180     219 ..     262     301 ..     168     345 .. 0.59
   3 !    5.7   0.1    0.0063        11      82     274 ..     769    1004 ..     752    1028 .. 0.79

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 4.4e-06
      AAA_21  1 lnvliGpNgsGKSnLLdal 19
                ln++iGpNg+GKS++  a+
  EPX73311.1 46 LNMVIGPNGTGKSTVVSAI 64
                79***************99 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.5
      AAA_21 180 kekrllqrlvrslklveielsdlgegeeliasvderlrer 219
                 ++k++l++++ ++++v +  +  +   ++ ++++++l  +
  EPX73311.1 262 EIKDQLKQFIEESRPVLSLTDQFQSDLQDKKEAFNQLSSS 301
                 3333333333333333333333333333333333333333 PP

  == domain 3  score: 5.7 bits;  conditional E-value: 0.0063
      AAA_21   82 qv..eeklssvetllesgllldkrsleeedvfnpeargirggvsvfslkelsvsepndlqfgkaltditsrawsllllldglrke....rigllnif 172 
                   +  e +l+  e + e   +  ++  ++  +++++  ++r+++ + ++   ++ + +d+++   +t+ ++ +++  +  +++  e     + + n+f
  EPX73311.1  769 VIeaEYRLQKHELDAEQVNTMMRELHDKQQETSARIAEARKDAMETYNSVVERLQNEDQERQTSITEESENFSTVSEVENKISVEetklGFMNVNNF 865 
                  335666777777788888889999999999999999**************************************99999999999976655555555 PP

      AAA_21  173 adyfgfakekrllqrlvrslklveielsdlgegeeliasvderlrer........................................gvvflengdg 229 
                   ++ +  +++++ +  ++ ++l+e  ls+     e+i++++++++ +                                         v f e ++ 
  EPX73311.1  866 VMEQYDRRKLEIEELEMKLSRLDETILSTQ----EKIEDIKRVWLVKlegvieciterfsksmssmgyagevrlgkaedfdkwridiMVQFREAEGL 958 
                  566666666666666666666666555555....56677777777778899***********************************9999******* PP

      AAA_21  230 qelparelSdGtkrllalltallralkkg..sllliDEpEngLHPkl 274 
                  q+l+    S G +++   + +ll++ + +  ++ ++DE+  g++P+ 
  EPX73311.1  959 QKLTGQRQSGGERSV-STIMYLLALQGVAtaPFRIVDEINQGMDPRN 1004
                  ***************.666666655555568**************75 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   3.5e-06    0.0063       3      42 ..      26      64 ..      24      69 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 3.5e-06
      AAA_29  3 rlqlvNWgtfdghtieidlkgatlltGpsGsGKSTllDAi 42
                r++lvN  t++  ++   +    +++Gp+G+GKST++ Ai
  EPX73311.1 26 RVKLVNFVTYEYCEFYPGPY-LNMVIGPNGTGKSTVVSAI 64
                78899999998855555544.689*************987 PP

>> AAA_27  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   2.1e-05     0.037      24      88 ..      42     112 ..      24     146 .. 0.67
   2 ?   -1.7   0.1         1   1.9e+03     154     175 ..     206     226 ..     174     268 .. 0.65
   3 ?   -2.5   0.2       1.8   3.3e+03     171     197 ..     325     351 ..     305     389 .. 0.54
   4 ?   -0.2   0.1      0.36   6.4e+02     159     207 .]     651     699 ..     610     699 .. 0.82
   5 ?    0.9   0.5      0.17     3e+02     106     173 ..     762     830 ..     713     856 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 2.1e-05
      AAA_27  24 eeadlhliyGpNEAGKstalrAis.dl.....lfGipertkdnflhdakkLrigavleeadgeelefaRrk 88 
                   + l +++GpN +GKst+++Ai   l     l G  +++++   + +++  i+  l+ +++++++++R  
  EPX73311.1  42 PGPYLNMVIGPNGTGKSTVVSAIClGLgwppkLLGRAKEAREYIKYGKNSATIELELKLKNNNTVTITRVI 112
                 56789*****************9522211222456666666666777777777777777777777777754 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1
      AAA_27 154 GlaslrevleaLeaeadelfkp 175
                  l+s++e ++aLe+e  ++fk+
  EPX73311.1 206 TLNSIKERQQALEKEV-KIFKD 226
                 2334444444444443.24444 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 1.8
      AAA_27 171 elfkprkskkrainealeeleeakkel 197
                 +++++ +s+++ +++++++++ea+++l
  EPX73311.1 325 RIYEKINSNRALLKTSQAAVQEAQRAL 351
                 333333333333333333333333332 PP

  == domain 4  score: -0.2 bits;  conditional E-value: 0.36
      AAA_27 159 revleaLeaeadelfkprkskkrainealeeleeakkelreaqvraeew 207
                 ++ l++L+a+ ++l ++ ++ ++ i ea+e++++++ke  e+ v  +ew
  EPX73311.1 651 TSGLNELQANESKLQNKVGECDALISEANESITNLRKERDEKLVPLREW 699
                 4556778888888888888888888888888888888888887777776 PP

  == domain 5  score: 0.9 bits;  conditional E-value: 0.17
      AAA_27 106 vlaallggldretFealFgLdherLreGGealleaegelgqlLfeasa.GlaslrevleaLeaeadelf 173
                 +l + l+ ++ e   + + Ld+e++++  ++l +++ e +  + ea+  ++++ ++v+e+L++e +e  
  EPX73311.1 762 TLGSRLNVIEAEYRLQKHELDAEQVNTMMRELHDKQQETSARIAEARKdAMETYNSVVERLQNEDQERQ 830
                 555555555555556667777777777777777777777777777764256667777777777766544 PP

>> Ndufs5  NADH:ubiquinone oxidoreductase, NDUFS5-15kDa
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.2   0.2        10   1.8e+04      67      90 ..     198     221 ..     186     226 .. 0.68
   2 ?   12.4   0.0   8.2e-05      0.15      34      70 ..     382     419 ..     366     433 .. 0.71

  Alignments for each domain:
  == domain 1  score: -4.2 bits;  conditional E-value: 10
                 HT-HHHHHHHHHHHHHHHH-TTSS CS
      Ndufs5  67 llrqktmkrlkeirkqreklikeg 90 
                 l++ + ++ l++i+++++ l ke 
  EPX73311.1 198 LYKDQGQNTLNSIKERQQALEKEV 221
                 555666667777777777777765 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 8.2e-05
                 HHHHHHHHHHSSSHHHHTTTSTTHH.HHHHHHHHHT-H CS
      Ndufs5  34 hafekewiecahgigktrakkecki.efedfeecllrq 70 
                   +e+e +ec+h++g++r++k  k+   ++++  l  +
  EPX73311.1 382 LRYENEKLECSHALGSIRTSKAQKLlGIDNLRRELNAY 419
                 569*****************998852566666655554 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0     3e-05     0.053      15      75 ..      48     105 ..      39     160 .. 0.63
   2 ?   -2.5   2.3       3.9     7e+03      70      93 ..     245     271 ..     196     354 .. 0.55
   3 ?   -2.6   3.2       4.2   7.5e+03     109     109 ..     840     840 ..     740     984 .. 0.59

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 3e-05
                 EEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSB CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  15 aivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpelt 75 
                  ++G+nG+GKSt++++++  l +    +   g+  + +e  ++ k++++++ e +l+++ t
  EPX73311.1  48 MVIGPNGTGKSTVVSAICLGLGWPPKLL---GRAKEAREYIKYGKNSATIELELKLKNNNT 105
                 579**************97666633332...222233334444555555555544444444 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 3.9
                 S-TTSBHHHH...HHHTCHHHHHHHST CS
                 xxxxxxxxxx...xxxxxxxxxxxxxx RF
    ABC_tran  70 lfpeltvren...esdeeiekalsklg 93 
                 + +e+tv  n   e+++ei++ l+++ 
  EPX73311.1 245 IYREKTVTYNqlrEKKREIKDQLKQFI 271
                 333333333334433333333333322 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 4.2
                 S CS
                 x RF
    ABC_tran 109 L 109
                 +
  EPX73311.1 840 F 840
                 1 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   0.00024      0.43       2      24 ..      48      70 ..      47     107 .. 0.82
   2 ?   -3.6   0.1       7.7   1.4e+04      81      99 ..     781     799 ..     773     819 .. 0.64

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00024
                EEESSTTSSHHHHHHHHHHHHTH CS
         AAA  2 llyGppGtGKTllakavakelgv 24
                +++Gp GtGK+++++a++  lg 
  EPX73311.1 48 MVIGPNGTGKSTVVSAICLGLGW 70
                589**************977764 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 7.7
                 HHHHHHHHHHHHHHHTTTS CS
         AAA  81 eeervvnqLlteldgvkkk 99 
                  + + vn++++el + +++
  EPX73311.1 781 LDAEQVNTMMRELHDKQQE 799
                 4555667777777766664 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.0    0.0031       5.5       9      25 ..      48      64 ..      43     138 .. 0.87
   2 ?    1.7   0.3      0.16   2.9e+02      71     115 ..     256     302 ..     206     317 .. 0.78
   3 ?   -2.6   0.1       3.5   6.3e+03      64     103 ..     377     416 ..     332     429 .. 0.66

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0031
      AAA_22  9 vvtGesGtGKTtllrrl 25
                +v+G+ GtGK+t++  +
  EPX73311.1 48 MVIGPNGTGKSTVVSAI 64
                79**********98765 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.16
      AAA_22  71 erlsseellealeqalraravielliiDEaqh.lr.seealeeL.rsl 115
                  r +++e+ ++l q +++ +  +l + D +q  l  ++ea+++L +sl
  EPX73311.1 256 LREKKREIKDQLKQFIEESRP-VLSLTDQFQSdLQdKKEAFNQLsSSL 302
                 566788899999999999999.99999*****99666*****995444 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 3.5
      AAA_22  64 lglelkaerlsseellealeqalraravielliiDEaqh.l 103
                 l++e+ ++++++ e+ +al     ++a  +ll iD+  + l
  EPX73311.1 377 LNSEKLRYENEKLECSHALGSIRTSKAQ-KLLGIDNLRReL 416
                 3333333556666666666666666666.888888776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1076 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2471  (0.137821); expected 358.6 (0.02)
Passed bias filter:                      643  (0.0358637); expected 358.6 (0.02)
Passed Vit filter:                        91  (0.00507558); expected 17.9 (0.001)
Passed Fwd filter:                        27  (0.00150594); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 1.14u 0.30s 00:00:01.44 Elapsed: 00:00:00.47
# Mc/sec: 6875.92
//
Query:       EPX73312.1  [L=83]
Description: DASH complex subunit Dad3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.7e-24   84.3   1.5    5.7e-24   84.0   1.5    1.1  1  DASH_Dad3  DASH complex subunit Dad3
  ------ inclusion threshold ------
       0.02   15.0   0.5      0.041   14.0   0.5    1.5  1  MetOD2     Metanogen output domain 2


Domain annotation for each model (and alignments):
>> DASH_Dad3  DASH complex subunit Dad3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.0   1.5   6.4e-28   5.7e-24       4      71 ..      14      81 ..      12      83 .] 0.96

  Alignments for each domain:
  == domain 1  score: 84.0 bits;  conditional E-value: 6.4e-28
   DASH_Dad3  4 leqevLdeYerLaenlktLaselkeLasnsteeildgLReLErkiglvyTLlKaSVYsivlqqeedee 71
                l+++vLdeY++La+n+++La+ l+e+  n++++ild+LReLE+ iglv+TL+KaSV++i+++ e +e 
  EPX73312.1 14 LQKQVLDEYTKLARNMDSLAKLLHEMVYNPSNNILDSLRELEKEIGLVHTLFKASVWAILADLETQET 81
                89***********************************************************9998765 PP

>> MetOD2  Metanogen output domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.5   4.6e-06     0.041      17      69 ..      14      57 ..       8      63 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 4.6e-06
      MetOD2 17 vdkeiidEYarLaksvevnkrllslLsqtydidddkaevseeieaalknlekk 69
                ++k+++dEY +La+++++  +ll+  + +y+ +       ++i + l++lek+
  EPX73312.1 14 LQKQVLDEYTKLARNMDSLAKLLH--EMVYNPS-------NNILDSLRELEKE 57
                5899**************999986..5567766.......3455555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       760  (0.0423894); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.20s 00:00:00.55 Elapsed: 00:00:00.35
# Mc/sec: 706.11
//
Query:       EPX73313.1  [L=439]
Description: CAMK/RAD53 protein kinase Mek1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-64  217.8   0.0    2.5e-64  217.2   0.0    1.3  1  Pkinase         Protein kinase domain
    3.5e-29  101.9   0.0    6.3e-29  101.1   0.0    1.3  1  Pkinase_Tyr     Protein tyrosine kinase
    1.3e-11   44.6   0.1      4e-11   43.1   0.1    1.9  1  FHA             FHA domain
    9.4e-06   25.1   0.0    1.8e-05   24.2   0.0    1.4  1  Kinase-like     Kinase-like
    5.6e-05   22.3   0.1    9.3e-05   21.5   0.1    1.3  1  Haspin_kinase   Haspin like kinase domain
    0.00056   19.3   0.0    0.00092   18.6   0.0    1.3  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
    0.00093   18.1   0.0     0.0017   17.2   0.0    1.4  1  Pkinase_fungal  Fungal protein kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  217.2   0.0   9.8e-68   2.5e-64       4     264 .]     163     418 ..     160     418 .. 0.92

  Alignments for each domain:
  == domain 1  score: 217.2 bits;  conditional E-value: 9.8e-68
                 EEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHHHHH CS
     Pkinase   4 leklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseeeakk 102
                 ++ lG+G+f+++y a+e++tg+++A+K+i+k+k ++++     +E++ilkkl+hpniv++   ++++++++++ e+v gg+l+++l++ g+++e ++ +
  EPX73313.1 163 HRLLGTGGFSRIYMAIENKTGRQYACKIIEKRKVSSSRF-YDDHEVSILKKLNHPNIVHVAMDYNSENQFFIFEELVTGGDLFSYLTKMGTVPEVTCLF 260
                 688*******************************99886.5679******************************************************* PP

                 HHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTE....EEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHH...........TTSCBSHHHHHHHHHHH CS
     Pkinase 103 iakqilegleylHskgiiHrDlKpeNiLidekge....lKitDFGlakelessskltsfvgtseYlAPEvl...........keneyskkvDvWslGvi 186
                 i++q+l++l ylHs++i HrDlK eNiLi ++ +    + +tDFG+a+ +e+++++++fvgt eY APEv             + +y+k+vD+WslG+i
  EPX73313.1 261 IMYQLLQALGYLHSQNIAHRDLKLENILIVSSSDsvfrIILTDFGVARCMENGKRMSTFVGTLEYTAPEVRdlkgrsrrykeLNMGYGKEVDIWSLGII 359
                 ******************************66666888899*****************************88898876554333789************ PP

                 HHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 187 lyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 +y ll+g+ p  + +g+                     ++ + ++++s++akdl+ + l+k+p++R+t+ee+l+hp++
  EPX73313.1 360 MYLLLSGNSPIFSMEGNI-------------------VFEDAIWRTVSRQAKDLICSFLQKEPSERPTVEEALEHPWF 418
                 ********9999333322...................34468899********************************8 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.1   0.0   2.4e-32   6.3e-29       4     255 ..     163     412 ..     161     415 .. 0.86

  Alignments for each domain:
  == domain 1  score: 101.1 bits;  conditional E-value: 2.4e-32
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSB CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekeklt 101
                  ++ lG G f++++++  +    k+  + a K++++++ ++++    +e++i+kkl+hpniv++   + +e++ +i  e+v+gGdL ++L+k    ++ 
   EPX73313.1 163 HRLLGTGGFSRIYMAIEN----KTGRQYACKIIEKRKVSSSRFYDDHEVSILKKLNHPNIVHVAMDYNSENQFFIFEELVTGGDLFSYLTKM--GTVP 254
                  5789***********999....889999*****88877776666667*****************99999**********************8..8888 PP

                  HHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE..TT..EEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE...........EEH CS
  Pkinase_Tyr 102 lkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse..nk..vvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk...........fts 184
                    + l +++q+ +++ yL+s+++ Hrdl   N+L+ +  ++   + ++DfG+ar +   ++ ++ ++    ++++apE+ + k            + +
   EPX73313.1 255 EVTCLFIMYQLLQALGYLHSQNIAHRDLKLENILIVSssDSvfRIILTDFGVARCM---ENGKRMSTFVGTLEYTAPEVRDLKGrsrrykelnmgYGK 349
                  999999****************************9874433236778*******99...5556667778899******97665567899999****** PP

                  HHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHH CS
  Pkinase_Tyr 185 ksDvWsfGvllwEiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfsel 255
                  + D+Ws G++++ +++ g+sp+ +++ + v+e    +       +++++ ++l+ + ++++p+eRpt +e 
   EPX73313.1 350 EVDIWSLGIIMYLLLS-GNSPIFSMEGNIVFEDAIWR-------TVSRQAKDLICSFLQKEPSERPTVEEA 412
                  ************9999.********998888765444.......445566789999999999999998875 PP

>> FHA  FHA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.1   0.1   1.6e-14     4e-11       1      67 [.      62     131 ..      62     133 .. 0.91

  Alignments for each domain:
  == domain 1  score: 43.1 bits;  conditional E-value: 1.6e-14
                 EEEESSTTSSEETTSTTSTTTEEEE....EEETTCEEEEEEEESSSSSEEETTEEESTTSEEEE-TTEEEE CS
         FHA   1 vtiGRssdcdivlddpsiSrkHali....kfdkgsgkvyleDlgSknGtfvNgqrigkgepveLksgdvie 67 
                 vt+GR + ++++l +++ S +H+++    + d++++ vy +Dl S+nGtf+N+  igkg+ v L++gd+++
  EPX73313.1  62 VTVGRGNANTYQLIQSTASYRHFRVysvlVDDDMDPLVYCQDL-SSNGTFLNHCLIGKGNVVLLSDGDILD 131
                 69**********************766645555599******9.9************************97 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.0   6.9e-09   1.8e-05     147     287 ..     259     405 ..     237     406 .. 0.77

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 6.9e-09
  Kinase-like 147 lllTlqlirlaanLqakglvhgkftvdnlll....dekgglmlggftaLvragtkvvlseve..kgfaPpEllgsrggytrknktkmth..kldaWql 236
                  l +  ql++   +L+++ + h +++ +n+l     d  ++++l++f+  +   +  ++s+      +  pE++  +g+ +r ++++m +  ++d W l
   EPX73313.1 259 LFIMYQLLQALGYLHSQNIAHRDLKLENILIvsssDSVFRIILTDFGVARCMENGKRMSTFVgtLEYTAPEVRDLKGRSRRYKELNMGYgkEVDIWSL 356
                  456678999999*****************9744446789******997766655555555552466889****99999666677777662269***** PP

  Kinase-like 237 GlviyriwclklPltlateeakeewkfklckkipekvkaLlkkfLqlsqed 287
                  G+ +y + + + P+  ++ ++  e      + ++ + k L+  fLq +  +
   EPX73313.1 357 GIIMYLLLSGNSPIFSMEGNIVFE--DAIWRTVSRQAKDLICSFLQKEPSE 405
                  *************97766555444..4555677778888888888876655 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.1   3.6e-08   9.3e-05     172     261 ..     214     313 ..     156     321 .. 0.78

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 3.6e-08
  Haspin_kinase 172 lkek.....pdfyseqqlflvlllkdkGtd...LeevklkswkqalsifwqivkiLyvaEtkfeFEHRdLhldniLvdkn....lnvtlidlklsR 255
                    ++ +      d  se+q f+  +l  +G+    L+++      ++l i++q ++ L    ++ +  HRdL+l+niL+ ++      ++l d+ ++R
     EPX73313.1 214 NHPNivhvaMDYNSENQFFIFEELVTGGDLfsyLTKMGTVPEVTCLFIMYQLLQALGYLHSQ-NIAHRDLKLENILIVSSsdsvFRIILTDFGVAR 308
                    33334444478899999999999*99998611145555566678999*********998765.899***********888777799********** PP

  Haspin_kinase 256 lesseg 261
                      + +g
     EPX73313.1 309 CME-NG 313
                    973.33 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0   3.6e-07   0.00092      93     170 ..     231     308 ..     204     318 .. 0.82

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 3.6e-07
         Kdo  93 lllterlegaqdLedllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDldkar 170
                 + + e+l    dL  +l+k  +++e     ++ ++ ++   lh+ ++ H+dl   nil+    +  ++i+l D+  ar
  EPX73313.1 231 FFIFEELVTGGDLFSYLTKMGTVPEVTCLFIMYQLLQALGYLHSQNIAHRDLKLENILIVSSSDSVFRIILTDFGVAR 308
                 5677888888899999999888777777788888999999*********************************97555 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   6.8e-07    0.0017     312     385 ..     262     330 ..     246     353 .. 0.85

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 6.8e-07
  Pkinase_fungal 312 lrDaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaiev 385
                     +++ ++++  L+  ++i HrD   +Nili+ s +++  + +L D+ +a  +++ ++ s   + +GTle+ a ev
      EPX73313.1 262 MYQLLQALGYLH-SQNIAHRDLKLENILIV-SSSDSVFRIILTDFGVARCMENGKRMS---TFVGTLEYTAPEV 330
                     556677888899.9****************.778889**************9766555...589**99999776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (439 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       385  (0.0214736); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 3168.19
//
Query:       EPX73314.1  [L=268]
Description: hypothetical protein SOCG_01065 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.4e-65  220.7   0.0    1.8e-65  220.3   0.0    1.1  1  ThiJ_like  ThiJ/PfpI family-like


Domain annotation for each model (and alignments):
>> ThiJ_like  ThiJ/PfpI family-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  220.3   0.0   9.8e-70   1.8e-65       1     196 []      46     229 ..      46     234 .. 0.99

  Alignments for each domain:
  == domain 1  score: 220.3 bits;  conditional E-value: 9.8e-70
   ThiJ_like   1 ladeGydvtevaipwkvlkdagfsveFvtekgkvpkadekllsgikakllgaskeakdiYkelstleeFkeplslssesFsleeydlvllpGGsdkavr 99 
                 l+d+Gydvt+v+ +w+++ ++gf v+F+t +g+v++ad + lsg+k++++ga++e++++Y+++st +eF +plslss+sF+l++ydlvl+pGG+d+av 
  EPX73314.1  46 LPDNGYDVTQVCESWQYFLKQGFIVHFATLTGNVAQADLTQLSGFKSWFIGATAETCKLYDRMSTISEFLKPLSLSSDSFTLNTYDLVLIPGGKDPAVL 144
                 79************************************************************************************************* PP

   ThiJ_like 100 elleserlhsllveylklvkrekepskvlgaicqgvlalafakpeldlktttlPlwmertsillgstaeklgyyYktyliseaveadvpeskyvagP 196
                 ++++s+rl++ll++y++l++r+ ++++ lgai+qg++a++ a p+l++k+tt+Pl+merts+l+g+ ++ +   Y+++li        p +ky agP
  EPX73314.1 145 DFVHSSRLSALLADYIPLCSRA-SGNHALGAIAQGAIAIHRAVPNLQIKSTTTPLYMERTSYLFGAANPPA---YASMLI--------PADKYEAGP 229
                 **********************.7*******************************************9999...******........999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (268 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       363  (0.0202465); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 1837.89
//
Query:       EPX73315.1  [L=913]
Description: LEM domain-containing protein Man1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-50  172.9   2.3      2e-50  172.1   2.3    1.4  1  MSC            Man1-Src1p-C-terminal domain
    3.3e-15   55.5   0.1      9e-15   54.1   0.1    1.8  1  HeH            HeH/LEM domain
  ------ inclusion threshold ------
      0.052   12.8   0.4       0.12   11.6   0.4    1.5  1  BsuBI_PstI_RE  BsuBI/PstI restriction endonuclease domain


Domain annotation for each model (and alignments):
>> MSC  Man1-Src1p-C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  172.1   2.3   3.4e-54     2e-50       2     338 .]     472     907 ..     471     907 .. 0.81

  Alignments for each domain:
  == domain 1  score: 172.1 bits;  conditional E-value: 3.4e-54
         MSC   2 llvllilfglw.YreekiavGyCgtgs..........etnsileeeeeeeeslleslkP.....................kCtpCPehAiCysnlevkC 68 
                 l vl+++++l+ +++e+ +vG+C++++          +                    P                     kC+pCP++A+C  n+e  C
  EPX73315.1 472 LSVLFVALSLAfWQQEVRRVGFCEIPEepypsyissiK--------------------PepvrstlqsvytylnirglkaKCVPCPSSAKCGRNREYVC 550
                 678888888888**************965554333331....................2222222222333444455555******************* PP

         MSC  69 epgyvlkphplslggllPlppsCvpdsekerkvkevakkalelLreknakvecgeskddeek...akksglseeeLkeslsekksksiskeefeelwke 164
                 e++ + ++++ls +g++P +psC+   + +++++ ++k+++++++e++++   +++ ++ ek   ++  +   ++++e++++k +  ++ +ef+ ++++
  EPX73315.1 551 ESETKQHTPFLSHFGFKP-HPSCISIGSVTDRIESIIKRCVDMVEEWYTQNGSKTQISHGEKlsqNHFHSSVIDKFYEEFKDKMDLEVTMDEFKVYFRQ 648
                 ******************.********************************999998887554433333334577888888877888************ PP

         MSC 165 alkeLkke........eeivvredsesese.......................ksskekkkllrst...slaklslkcrlrrsvret............ 217
                 al++L+          e i+v + +    +                       +s ++++ +l s+   + +++ l+  ++  + +t            
  EPX73315.1 649 ALERLHIMkrkenrvpESILVIYSH----FkdvashlrdiintnvvvtsktisNSISHSIISLVSSihqNVPRFALRTTFQSIYDNTgsmlyqlstnln 743
                 ****987766666776444444433....0344577888888777777766665555555555555455555666666666666666999999999999 PP

         MSC 218 ...................................laryrllllglllllllilylrsrlrsrraekerveelvkevlerLkkqkkkhaedpstapepy 281
                                                    l++y+++ l +l + ++i yl+s + s +++++ v+ +vk++++rL+ +kk + +d s +p  +
  EPX73315.1 744 rvyfellgkiirsmmslggtglewlgkmtqlllipLKKYSMTALYVLSACVAIPYLWSLFISFYSTEKLVKVCVKHCVSRLQVAKKSSLKDVSNNP--R 840
                 99999999999999******************************************************************************9998..* PP

         MSC 282 lslvqLRDdvLqdehs............lkernrlWkkvekvveqnsnVrtsleevhGeimrvWeWiGs 338
                 ++l +LR +++  + +              +++r+W++  +v++q+ +Vr+ + +   ++ r+WeWiG+
  EPX73315.1 841 IQLDELRAECFVYHPEqlkdleclkdtsSITQKRVWRRTIEVIDQMVSVRVFDDK--LTNKRAWEWIGV 907
                 **********88886668888888888899***********************99..89********95 PP

>> HeH  HeH/LEM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.1   0.1   1.5e-18     9e-15       3      35 .]      16      48 ..      14      48 .. 0.97

  Alignments for each domain:
  == domain 1  score: 54.1 bits;  conditional E-value: 1.5e-18
         HeH  3 sLtVaqLRriLvehgveyPsnaKKadLveLfnd 35
                sL+V++LR+iL  h++++Ps+aKKa LveLfn+
  EPX73315.1 16 SLRVIDLREILSRHQIYFPSTAKKAHLVELFNK 48
                9******************************97 PP

>> BsuBI_PstI_RE  BsuBI/PstI restriction endonuclease domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.4     2e-05      0.12       6     109 ..     599     710 ..     597     734 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2e-05
  BsuBI_PstI_RE   6 pngeeiklspGk...snllikavieefaprFlkeaevlyvgdtedkvlvldeellkelgleidshkklPD..ivlyde......eknlLvliEavt 90 
                    +ng + ++s G+   +n+ + +vi++f ++F  + +   ++ t d++ v   ++l++l +  ++++++P   +v+y++      + + ++ + +v 
     EPX73315.1 599 QNGSKTQISHGEklsQNHFHSSVIDKFYEEFKDKMD---LEVTMDEFKVYFRQALERLHIMKRKENRVPEsiLVIYSHfkdvasHLRDIINTNVVV 691
                    57889999999744479**************66654...6778999999999*****************943344444666533222344455666 PP

  BsuBI_PstI_RE  91 sdGpinekRkeelkellee 109
                    ++  i+++  +++ +l+++
     EPX73315.1 692 TSKTISNSISHSIISLVSS 710
                    6666666666666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (913 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       722  (0.04027); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.69u 0.29s 00:00:00.98 Elapsed: 00:00:00.45
# Mc/sec: 6030.73
//
Query:       EPX73316.1  [L=299]
Description: poly(A) binding protein Nab2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
     0.0012   19.2  21.4     0.0079   16.6   0.7    3.6  3  zf-CCCH_2      RNA-binding, Nab2-type zinc finger
  ------ inclusion threshold ------
      0.093   12.9   0.0       0.15   12.2   0.0    1.2  1  NAD_binding_2  NAD binding domain of 6-phosphogluconate dehyd
      0.098   13.0   0.2       0.21   12.0   0.0    1.6  2  EnY2           Transcription factor e(y)2
       0.46   10.5   5.1         14    5.7   0.1    3.1  2  zf-CCCH        Zinc finger C-x8-C-x5-C-x3-H type (and similar


Domain annotation for each model (and alignments):
>> zf-CCCH_2  RNA-binding, Nab2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.7   1.8e-06    0.0079       2      18 .]     179     195 ..     178     195 .. 0.96
   2 ?    4.0   1.6     0.017        76       7      17 ..     217     227 ..     212     228 .. 0.74
   3 !    8.6   5.0   0.00059       2.6       8      18 .]     251     261 ..     246     261 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.8e-06
   zf-CCCH_2   2 CrffpnCtnpkCpFaHP 18 
                 C+f  +C + +C FaHP
  EPX73316.1 179 CKFADKCARSDCVFAHP 195
                 ****************9 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.017
   zf-CCCH_2   7 nCtnpkCpFaH 17 
                 +C+np+C   H
  EPX73316.1 217 DCKNPDCVEGH 227
                 7******7555 PP

  == domain 3  score: 8.6 bits;  conditional E-value: 0.00059
   zf-CCCH_2   8 CtnpkCpFaHP 18 
                 C np+C+F HP
  EPX73316.1 251 CLNPSCRFLHP 261
                 9*********9 PP

>> NAD_binding_2  NAD binding domain of 6-phosphogluconate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   3.3e-05      0.15      32      81 ..      11      60 ..       4      64 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 3.3e-05
                   HHHHHHHHHTTEEE-SSHHHHHHHCSEEEE-SSSHHHHHHHHHSHCCC-- CS
  NAD_binding_2 32 kekveelvaegakaaesieelvasldvvitmvkagkavdeviegllealk 81
                   ++k+ +lv++++  +  +ee+++  d++++m+ +gk+  +v+e+l++ + 
     EPX73316.1 11 NAKLHQLVESKLAEYGWAEEAASLTDFIFVMIGNGKDQSQVTEELIDLIG 60
                   5788999999999999999999999*******************998765 PP

>> EnY2  Transcription factor e(y)2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   4.6e-05      0.21       8      65 ..       5      64 ..       2      77 .. 0.75
   2 ?   -3.3   0.0       2.8   1.3e+04      67      76 ..     100     109 ..      82     111 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 4.6e-05
                HHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH..H..HTSS.CHHHHHHHHHHHHH CS
        EnY2  8 LvesGererlkelLrerLeesGWrdevkelckeiir..ekgleeevsveelveeitpkar 65
                L+++  + +l +l +++L e GW +e ++l+  i     +g++++   eel++ i p+  
  EPX73316.1  5 LENQEINAKLHQLVESKLAEYGWAEEAASLTDFIFVmiGNGKDQSQVTEELIDLIGPEFD 64
                555666789******************999887766443455544456778877777765 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 2.8
                 HS-HHHHHHH CS
        EnY2  67 lVPdevkkel 76 
                 +VP e+ +e+
  EPX73316.1 100 SVPAEIPQET 109
                 5666666665 PP

>> zf-CCCH  Zinc finger C-x8-C-x5-C-x3-H type (and similar)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   2.1     0.011        47      14      26 ..     184     195 ..     176     196 .. 0.78
   2 ?    5.7   0.1    0.0031        14      19      27 .]     254     262 ..     252     262 .. 0.89

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.011
                 --TTGGG-SSBSC CS
     zf-CCCH  14 yCkyGdrCkFaHg 26 
                  C + + C FaH+
  EPX73316.1 184 KCAR-SDCVFAHP 195
                 5888.99*****9 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0031
                 GG-SSBSCS CS
     zf-CCCH  19 drCkFaHgq 27 
                 ++C+F H+q
  EPX73316.1 254 PSCRFLHPQ 262
                 68*****97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (299 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       489  (0.0272742); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 2254.20
//
Query:       EPX73317.1  [L=639]
Description: membrane transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-20   74.0  31.8    5.8e-20   71.5  17.6    2.2  2  MFS_1     Major Facilitator Superfamily
  ------ inclusion threshold ------
        8.5    6.4   7.1       0.29   11.1   0.6    2.0  2  FhuF_C    FhuF 2Fe-2S C-terminal domain


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.5  17.6   6.5e-24   5.8e-20       4     270 ..     130     456 ..     127     471 .. 0.72
   2 !    8.3   6.3    0.0001      0.94      73     174 ..     528     631 ..     516     638 .. 0.77

  Alignments for each domain:
  == domain 1  score: 71.5 bits;  conditional E-value: 6.5e-24
       MFS_1   4 aaflsalarsi....lgpalpl.alaedlg...................ispseigllltl.yalgaavaslplGrlsdrfGrrrvlllglllfalg.l 76 
                 + f++a+++++    l++++ + + a+++g                   + +s +  +++   a++ ++++  +G l+d +Grr vl++++ + ++g +
  EPX73317.1 130 LNFINAFSWAMieipLLFLIRQgLCAKHYGldpsklapgdaicrlpeitSGVSKYRAAFGSvAAFLGLLSTACYGTLGDIYGRRLVLMIAVSFVLFGdM 228
                 56777777777555555555555556666655555555555555444332222233344441344457777778***********************88 PP

       MFS_1  77 llll..fa.sslwlllvlrvlqGlga..galfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafv.lfl 169
                 +ll   ++ s+l ++l++ +l Glg+  ++++++ ++++ad +  e+r+ +++l  a++ +G++lgp ++g+++ + + r ++y++ i ++l+   + +
  EPX73317.1 229 FLLYqsYSfSQLSFILLSACLKGLGGyiSTILAGQNSYVADCTQNEHRAWYLALNFATYHVGTALGPTISGYIL-QCSSR-MYYVFIITTMLWTFyILY 325
                 88887744599999************99**********************************************.55544.566666666666555778 PP

       MFS_1 170 lllpeepperkrkspkeeekgtgpaplvp.......awkallkdpvl......................w..illialllfffgfsglltllplylqev 237
                 ++l  +++ ++ +  +e      + ++++       ++k l+ + v                       w  +l ++l++ +++ +g+++llp+y+ + 
  EPX73317.1 326 VWLILPESLNRSEDNVES----TRLSFSSvidtclgPLKVLWPQVVCteescsirqydvncdthagrrhWdvMLAAVLIFLALIGAGAMALLPIYTDFY 420
                 999999999999999999....67777776678887566666666444445555556666666667777886677777777777777************ PP

       MFS_1 238 lgls......glllaglllallalvgailallagrlsdr 270
                 +g++       l++ +    ++a+  +++++l+++++ r
  EPX73317.1 421 FGWGplkaslILFTDS---FASAFTLVAIFPLVSKIIER 456
                 ****887544322222...22222222225677777766 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.0001
       MFS_1  73 alg.lllllfasslwlllvlrvlqGlgagalfpagaaliadwfpkeergraigllsagfslGailgpllgglla.sslg...Wravfyilaivsllafv 166
                 a++ ++ll+ a++   l+++ ++q++   +++p +++++   +  e  gr ++ ++++ +++ i+  +  ++++ +s+      ++fy+ a+++++++v
  EPX73317.1 528 AICsSVLLARAQTDVSLFIAVIVQAVS-NMVIPCVQSIALNGVLSEYNGRILAAFAVFEAAALIIRGPMYAYIYaASVDtsfPNLIFYVSAFLYVICLV 625
                 333245555335555688888999998.799999999999999999*****************88766666666477779988889***********77 PP

       MFS_1 167 lfllllpe 174
                 +   ++++
  EPX73317.1 626 V--TYFMR 631
                 6..55554 PP

>> FhuF_C  FhuF 2Fe-2S C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.6   3.2e-05      0.29      11      21 .]      29      39 ..      22      39 .. 0.88
   2 ?   -3.6   1.0       1.3   1.2e+04       4       6 ..     109     111 ..     106     111 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 3.2e-05
      FhuF_C 11 pggeyCgsCPL 21
                p+ eyC+sCPL
  EPX73317.1 29 PEREYCSSCPL 39
                999*******8 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 1.3
      FhuF_C   4 CCL 6  
                 CC+
  EPX73317.1 109 CCM 111
                 998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (639 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1140  (0.0635841); expected 358.6 (0.02)
Passed bias filter:                      514  (0.0286686); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.30s 00:00:00.95 Elapsed: 00:00:00.45
# Mc/sec: 4223.50
//
Query:       EPX73318.1  [L=181]
Description: hypothetical protein SOCG_01069 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       912  (0.0508673); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1427.09
//
Query:       EPX73319.1  [L=424]
Description: glucan endo-1,3-alpha-glucosidase Agn1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   5.7e-124  413.7   5.5   6.5e-124  413.5   5.5    1.0  1  Glyco_hydro_71  Glycosyl hydrolase family 71


Domain annotation for each model (and alignments):
>> Glyco_hydro_71  Glycosyl hydrolase family 71
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  413.5   5.5  3.6e-128  6.5e-124       1     374 [.      24     399 ..      24     400 .. 0.95

  Alignments for each domain:
  == domain 1  score: 413.5 bits;  conditional E-value: 3.6e-128
  Glyco_hydro_71   1 VfaHfmvgntenytasdwekDiklAkaagiDgFaLNigskdswtaeqladayeaAeavg..fkLflSfDmavagawpksevislikkyashpaql 93 
                     V+aHf+vgnt+ yt ++w++Dik+A++agiDgFaLNig  d+w+ e+++dayeaA++v+  fkLflSfDm+v  + + + ++ +++++a +p+ql
      EPX73319.1  24 VVAHFIVGNTYPYTIENWKEDIKDAHSAGIDGFALNIGG-DAWQVERVSDAYEAASSVSpdFKLFLSFDMTV-MPANPDYIEGIVRRFARKPNQL 116
                     89********999*************************5.******************778**********8.77778***************** PP

  Glyco_hydro_71  94 kvngkplvSTFeGeknaedwasiksal...........teeiffvPdfsslgaaaaaekaldvvDGlfsWeaWpkgatnmstetDeaylsalkg. 176
                      +++k++vSTF+Ge+  ++ +++++++           +  iff+P+++slg  a+++   +v DG++sW++Wp+ + +m++++D  y + +++ 
      EPX73319.1 117 WWDNKVFVSTFSGESDFFGHSDVSTGWnlavkqplesaGYPIFFAPSWTSLGGGALQQ---SVTDGFVSWNTWPTTSADMNANDDYYYKQLANSl 208
                     **************999999999999999999999998689*********99655555...8********************9999998888778 PP

  Glyco_hydro_71 177 .kpYmmpvSpwffthlgkesynknwvwrgddlwakRweqvlelqpdfveiitWNDygEShYigplkekkaqdgsskyvegmpHdgwrdllkyyia 270
                      k Y++p+Spwf+thl+    +knw +++d+l+ +R++q+l++qpd++e++tWND+gEShYig++++ + ++gs++yveg++H++wr +l++yia
      EPX73319.1 209 gKIYIAPISPWFYTHLS----YKNWAYKSDWLYVDRLQQMLDVQPDMIEVLTWNDFGESHYIGKIQG-ALPSGSESYVEGFDHTAWRLMLAPYIA 298
                     9***************5....5********************************************9.9999*********************** PP

  Glyco_hydro_71 271 ayKtgskkpaitedklvlwyRphpkkakcssgdttgnpanaelleDkvfvvallkspatvtvsvggkesetfsvkaGvnklsvpfngetGk.vkv 364
                     a+K+g++kp+i+ ++l++wyRp++k     ++d +g p++ ++ +Dk+++v++l +pa+vt+s+g++++ tf+++aGv+++s+++  ++G+ +++
      EPX73319.1 299 AFKDGARKPYINFESLFYWYRPSSKYS-VPTQDGIGYPSGGDYDQDKIYAVVYLLQPAEVTMSCGKNSQ-TFNAEAGVHRFSINM--APGSsPSF 389
                     *************************99.66999********************************9888.99*************..99999*** PP

  Glyco_hydro_71 365 svvrngktva 374
                     sv+r+gk++a
      EPX73319.1 390 SVSRQGKEMA 399
                     ******9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (424 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       496  (0.0276647); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 3023.57
//
Query:       EPX73320.1  [L=332]
Description: nudix family hydrolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      3e-09   37.0   0.0    5.4e-09   36.2   0.0    1.3  1  NUDIX     NUDIX domain
  ------ inclusion threshold ------
        0.2   11.7   0.0       0.36   10.8   0.0    1.4  1  DBC1      DBC1


Domain annotation for each model (and alignments):
>> NUDIX  NUDIX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.2   0.0   6.1e-13   5.4e-09      17     118 ..      61     170 ..      54     181 .. 0.78

  Alignments for each domain:
  == domain 1  score: 36.2 bits;  conditional E-value: 6.1e-13
                 EEEEEES...SSSTTTE....ESSEEECBTTS.HHHHHHHHHHHHHHSEEE.EEEEEEEEEEEEEEEEEEEEE...EEEEEEEEEEEECSGCSSTSTTT CS
       NUDIX  17 vLlvrrs...kkpfpgW....elPgGkvepgE.tpeeAArREleEEtGlea.ellellgrlhylapydgpygd...eheilyvfleevegelepndene 103
                 vLl++r+    ++   W    ++PgG  e ++ +   +A+RE++E +G++  e+  +l+   +++     +g+       ++vf+ ++  e + n e e
  EPX73320.1  61 VLLIQRAfreTDR---WsghvAFPGGIRETDDkSDVYTAIRETKEVVGIDLcEQGAYLAGSLDERVISSNWGStplLVLSSFVFVLPKLCEFQFN-ETE 155
                 9******544444...544346*******9998888*************999*****99766677777777775444444488888888888888.*** PP

                 EEEEEEEEHHHHHHH CS
       NUDIX 104 vsevrwvpleellke 118
                 v +++w+pl++ll++
  EPX73320.1 156 VFSAQWIPLTDLLRP 170
                 ************443 PP

>> DBC1  DBC1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0     4e-05      0.36      36      59 ..      86     109 ..      73     115 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 4e-05
        DBC1  36 atdpsvLiktaiRttkeltgldLs 59 
                 +td+++ + taiR tke++g+dL 
  EPX73320.1  86 ETDDKSDVYTAIRETKEVVGIDLC 109
                 67899999**************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (332 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       486  (0.0271069); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2544.23
//
Query:       EPX73321.1  [L=735]
Description: polyphosphate synthetase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.5e-80  269.0   0.1    7.7e-80  268.2   0.1    1.4  1  VTC       VTC domain
    2.5e-11   43.9   1.3    2.5e-11   43.9   1.3    1.6  2  DUF202    Domain of unknown function (DUF202)
    9.1e-08   32.4  15.4    0.00023   21.2   0.6    4.3  5  SPX       SPX domain
  ------ inclusion threshold ------
      0.024   14.8   0.1      0.055   13.6   0.1    1.5  1  FMP23     Found in mitochondrial proteome
       0.16   12.2   0.3        6.9    6.9   0.0    2.3  2  Med30     Mediator complex subunit 30


Domain annotation for each model (and alignments):
>> VTC  VTC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  268.2   0.1   2.1e-83   7.7e-80       2     275 .]     198     476 ..     197     476 .. 0.95

  Alignments for each domain:
  == domain 1  score: 268.2 bits;  conditional E-value: 2.1e-83
                 -EEEEEEE-HHHHHHHHHHHHTTS-B----------------.------EEEEEEE-TT-HHHHHHHHT-TT--EEEEEEES-GGG-.-EEEEEEEE-- CS
         VTC   2 rnetKywvhsdnvvevktlilkhlpvlvygaseeeiaaallr.ksadqtitsvYfDnndfelyenrilkmegaekiRlRwygkldne.dvflErktkhe 98 
                 r+++++wvh+dn++evkt i+++lpvl+y+ ++  + +  +  +  d+  t++YfDn++f+ly++++++ e a ++Rl+wygkl+ + d+++Er ++  
  EPX73321.1 198 RRTYRFWVHPDNLMEVKTFIMRRLPVLYYSGKHGFDRDRSAVsGILDPISTCLYFDNPNFDLYTQNLERSERAFSLRLHWYGKLNPKtDIIVERMVR-- 294
                 89****************************999877766555378899999*******************************999999*********.. PP

                 ------EEEEEEEE-GGGHHHHH---HHHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHTT-EEEEEEEEEEEEE--TT--SEEEEEEEEEEEEE-- CS
         VTC  99 swtgesstkerftlkqkfvksyllgrlpaeerleklkkkeeekevekleqlaeeiqntilrnslqPvvrtsYlRaaFqlstdnavRitiDtnlcmvred 197
                 + +++s ++ rf l++k+++++l+  ++ +e+ +++   e+ ++ ++++ql e++q++i +++lqPv+r  Y+R+aFq+++d++vR+ +D++++m+red
  EPX73321.1 295 EGSSLSHSEDRFVLREKKINEFLKEAYEPDEKKSRDDTTEA-SDSSRKKQLTEDVQKLIGEYNLQPVLRSVYTRTAFQIPGDDSVRVNLDSDWVMIRED 392
                 99*********************999999988888888888.899****************************************************** PP

                 --SSSS-SS-T..SS-SSTT.SS-TTTT--GGGEEE--SEEEEEEE--...----HHHHHHHTSTT-EE-TT--HHHHHHHHHH CS
         VTC 198 sfeerrkledt..werlded.vqqpvkllrkgevvrfpyavlEvKlqt...skspewiqeLlashlvievpkfSKYqhgvaslh 275
                 sf+++r+++d+  w+r d+d  + p+k lrkge  rfpy+vlE++      +++p wi+eL  shl+ e+ +fSKY hgva+l+
  EPX73321.1 393 SFDQERPCRDPvdWHRHDIDdADFPYKHLRKGEHFRFPYSVLEIRECLkpdEEEPLWISELRGSHLISEIDGFSKYEHGVAVLF 476
                 ********************9***********************97767788*****************************996 PP

>> DUF202  Domain of unknown function (DUF202)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.9   1.3   6.9e-15   2.5e-11       1      64 [.     614     673 ..     614     677 .. 0.90
   2 ?   -3.8   0.1         5   1.8e+04      50      55 ..     697     702 ..     688     713 .. 0.49

  Alignments for each domain:
  == domain 1  score: 43.9 bits;  conditional E-value: 6.9e-15
      DUF202   1 rdglAnERTfLaWlRtslalialglallrffltgepsalgkilglilivlgiltllvglvrylr 64 
                 +++lAnERT+L Wl + +++++l+lal+++    ++   g+++g i+++l++l+  ++++ + +
  EPX73321.1 614 KVWLANERTYLNWLQVVVLFGSLSLALYNS---AGEGI-GRVFGSIYVLLAVLMGMYAWRLHAK 673
                 68***************************5...66666.8*******************97765 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 5
      DUF202  50 lgiltl 55 
                 +++++ 
  EPX73321.1 697 VALAIS 702
                 222222 PP

>> SPX  SPX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.1   1.9e-06     0.007       1      31 [.       1      31 [.       1      36 [. 0.96
   2 ?    2.9   0.1     0.024        84     182     202 ..      42      62 ..      31      72 .. 0.83
   3 !   21.2   0.6   6.5e-08   0.00023     350     370 ..     112     132 ..     109     138 .. 0.93
   4 ?    0.2   0.1      0.15   5.4e+02     135     160 ..     294     348 ..     165     399 .. 0.59
   5 ?   -2.9   0.1       1.3   4.7e+03     296     323 ..     520     547 ..     485     573 .. 0.45

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 1.9e-06
         SPX  1 MKFakeLeenlvpEWrdaYldYkqLKKlIkk 31
                M+F  +Le+ + + Wr++Y++Y +LK  +k+
  EPX73321.1  1 MRFTDSLEAGIHQPWREHYMNYVKLKHFLKA 31
                9*************************99986 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.024
         SPX 182 aekeFferLdseLnkvetFyk 202
                  e+ F++ Ld++L+kv+ F +
  EPX73321.1  42 DESRFVSALDDQLEKVSVFHQ 62 
                 6889************99976 PP

  == domain 3  score: 21.2 bits;  conditional E-value: 6.5e-08
         SPX 350 LKsYqeLNrtAFrKIlKKfDK 370
                 L +Y +LN t+F KI KK+DK
  EPX73321.1 112 LEKYTRLNLTGFYKIVKKHDK 132
                 89******************* PP

  == domain 4  score: 0.2 bits;  conditional E-value: 0.15
         SPX 135 a.............................dssssssssesesssssspsllrrl 160
                 +                             d+++s++++++ s ss++++l++ +
  EPX73321.1 294 RegsslshsedrfvlrekkineflkeayepDEKKSRDDTTEASDSSRKKQLTEDV 348
                 0444444444444444444444444444444455555555555555555555444 PP

  == domain 5  score: -2.9 bits;  conditional E-value: 1.3
         SPX 296 neralekvkpektlkafldsvrrdylrk 323
                 +e  + ++ p+kt k++   +rr++ ++
  EPX73321.1 520 DETIFTDETPPKTSKKTPVVPRRAQASN 547
                 1222222223333333333333333333 PP

>> FMP23  Found in mitochondrial proteome
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   1.5e-05     0.055      16      93 ..      55     132 ..      47     147 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.5e-05
       FMP23  16 aksakiakdeykqlPedsnyiekfydeleafsneflekqlkksyadfedePeelvfqlekyielqiiPkyseeaaeks 93 
                  k++   ++ +  l e    +e  yd  ++f++  l+++ + ++ +  d+  +lv +leky  l+++  y+  +++++
  EPX73321.1  55 EKVSVFHQKIWEDLNELLTGVETIYDSSNEFTDATLTNEARLKFLEQLDSCTDLVKRLEKYTRLNLTGFYKIVKKHDK 132
                 555666677778888888899*******************************************99988876655544 PP

>> Med30  Mediator complex subunit 30
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0     0.031   1.1e+02      14      71 ..      62     118 ..      58     127 .. 0.90
   2 ?    6.9   0.0    0.0019       6.9      20      83 ..     310     380 ..     305     405 .. 0.69

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.031
       Med30  14 qdivsrtqelfqllkavqlpngrtqskhqaqdrkkklqeqlrqlkvlfkkLrliYekc 71 
                 q i + ++el++   +++++ ++ + +   ++++ k+ eql+  + l k+L + Y ++
  EPX73321.1  62 QKIWEDLNELLTGVETIYDSSNEFTDATLTNEARLKFLEQLDSCTDLVKRLEK-YTRL 118
                 66778899999999*****99999999************************98.7766 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0019
       Med30  20 tqelfqllkavqlpngrtq....skhqaqdrkkklqeqlrql...kvlfkkLrliYekckencqgleevpi 83 
                  + + ++lk++++p +++     ++ + ++rkk+l e +++l    +l   Lr +Y ++  ++ g ++v +
  EPX73321.1 310 EKKINEFLKEAYEPDEKKSrddtTEASDSSRKKQLTEDVQKLigeYNLQPVLRSVYTRTAFQIPGDDSVRV 380
                 556777888888887654322227778899***********9443356678*******9999988886653 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (735 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       719  (0.0401026); expected 358.6 (0.02)
Passed bias filter:                      525  (0.0292822); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.67u 0.28s 00:00:00.95 Elapsed: 00:00:00.43
# Mc/sec: 5103.28
//
Query:       EPX73322.1  [L=309]
Description: clr6 L associated factor 1 Laf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.5e-10   40.1   0.0    7.8e-10   39.0   0.0    1.6  1  SWIRM     SWIRM domain


Domain annotation for each model (and alignments):
>> SWIRM  SWIRM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.0   0.0   4.4e-14   7.8e-10       9      88 ..     237     308 ..     231     309 .] 0.87

  Alignments for each domain:
  == domain 1  score: 39.0 bits;  conditional E-value: 4.4e-14
       SWIRM   9 dslhpiEkellselfngkdktpeeYlkiRnkiialyrenp..keyltvteaqkalkrrrltgidvnllsrihefLerwGlIN 88 
                 + lhp E +l+++l+      + +Yl+ +++i+a+++++      +++t+aq+a +       dvn++sr++++++  G+++
  EPX73322.1 237 HLLHPAEIQLAATLR----LPCLVYLDNKRRIFAEWHNRRsqGLSFRKTDAQRASR------VDVNKASRLWKAFHDEGFFD 308
                 679************....******************8762355678899966666......6*************999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (309 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       587  (0.0327403); expected 358.6 (0.02)
Passed bias filter:                      306  (0.0170673); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.29s 00:00:00.80 Elapsed: 00:00:00.47
# Mc/sec: 1978.01
//
Query:       EPX73323.1  [L=589]
Description: RFC like checkpoint protein Rad17 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-45  155.5   1.9    1.8e-45  155.2   0.1    2.0  2  Rad17            Rad17 P-loop domain
    3.1e-09   37.3   0.2    2.2e-08   34.6   0.0    2.4  2  AAA              ATPase family associated with various cellul
    4.5e-06   27.0   0.0      2e-05   24.9   0.0    2.1  1  AAA_22           AAA domain
    3.5e-05   24.3   0.0     0.0001   22.8   0.0    1.8  1  AAA_16           AAA ATPase domain
    0.00022   21.5   0.0    0.00043   20.6   0.0    1.5  1  AAA_28           AAA domain
    0.00023   21.2   0.0    0.00064   19.7   0.0    1.8  1  AAA_5            AAA domain (dynein-related subfamily)
    0.00027   21.0   0.0     0.0014   18.6   0.0    2.3  2  AAA_14           AAA domain
    0.00031   20.5   0.0     0.0007   19.4   0.0    1.5  1  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    0.00032   21.0   0.0    0.00091   19.5   0.0    1.8  1  AAA_assoc_2      AAA C-terminal domain
     0.0013   19.1   0.1     0.0048   17.3   0.0    2.0  1  AAA_17           AAA domain
     0.0016   18.6   0.1     0.0069   16.5   0.0    2.1  2  AAA_33           AAA domain
      0.002   18.5   0.0      0.016   15.6   0.0    2.6  2  RNA_helicase     RNA helicase
     0.0022   18.5   0.1      0.015   15.8   0.0    2.6  2  AAA_18           AAA domain
     0.0082   15.9   0.0      0.062   13.0   0.0    2.6  2  Viral_helicase1  Viral (Superfamily 1) RNA helicase
  ------ inclusion threshold ------
       0.01   15.2   0.0       0.02   14.2   0.0    1.4  1  Mg_chelatase     Magnesium chelatase, subunit ChlI
      0.013   16.0   1.5      0.086   13.3   0.0    3.1  3  ABC_tran         ABC transporter
      0.014   15.4   0.0      0.044   13.8   0.0    1.9  1  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
      0.028   14.0   0.0      0.064   12.8   0.0    1.5  1  AAA_25           AAA domain
       0.03   14.7   0.5       0.13   12.6   0.2    2.3  2  AAA_19           AAA domain
      0.032   13.5   0.0      0.091   12.0   0.0    1.7  1  Zeta_toxin       Zeta toxin
      0.038   13.1   0.0       0.11   11.6   0.0    1.7  2  T2SSE            Type II/IV secretion system protein
      0.057   13.3   0.1       0.14   12.1   0.1    1.8  1  NACHT            NACHT domain
      0.072   12.8   0.0       0.18   11.5   0.0    1.6  1  AAA_30           AAA domain
      0.092   13.0   0.5       0.23   11.7   0.5    1.6  1  Hfx_Cass5        Integron Cassette Protein Hfx_Cass5
      0.099   12.6   0.2        1.1    9.1   0.0    2.6  3  NTPase_1         NTPase
        1.8    8.3  14.0      0.077   12.8   7.1    2.4  1  AAA_11           AAA domain


Domain annotation for each model (and alignments):
>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  155.2   0.1   2.6e-48   1.8e-45       4     184 ..      62     241 ..      59     243 .. 0.87
   2 ?   -1.8   0.2       3.5   2.4e+03      61     108 ..     297     342 ..     262     359 .. 0.54

  Alignments for each domain:
  == domain 1  score: 155.2 bits;  conditional E-value: 2.6e-48
       Rad17   4 denelWfekykPekaeelavhkkkieevkewlkadvLesrkkriLLisGPsGCgkstvvkvLskelgiklrewlnpvslkepdnqksdfk..gltekes 100
                 d   lWfeky+P k  elavhk k++++++w+  ++  sr   +L++sGP+GCgk+t+v+ L+ e+g +l ew+np+  +   nq+ d+   +l ek+ 
  EPX73323.1  62 DSSSLWFEKYQPTKSSELAVHKGKVNAIRQWMTENIPFSR---LLVLSGPPGCGKTTTVRLLAHEMGASLVEWSNPMDTRLI-NQEHDYEqfSLSEKFR 156
                 77899***************************87766665...***********************************6654.555554322899**** PP

       Rad17 101 rflsqiesfkeleLkdakylklqklGddlrtdkklilvedlP..nkfyrdsdalrevirkylrssealplilvitei.esl.egdnnq 184
                 rf+s+ e+++eleL ++       +  +   +kk+il+++lP  +k  + ++ +rev++ +l+s++++++ilv+te  ++  eg+n q
  EPX73323.1 157 RFMSLAETYPELELSSSTK---APKKTNSSEEKKFILLDELPhlSKQTGTLQMFREVLLSALQSRGSYSIILVLTETkQINsEGNNFQ 241
                 **************99988...345589999***********999999999*************************964431444444 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 3.5
       Rad17  61 vvkvLskelgiklrewlnpvslkepdnqksdfkgltekesrflsqies 108
                  +++L      +lr  ln++++  p+   +  +  + k++++ sq e+
  EPX73323.1 297 FIQELISASEGDLRSALNALQFYLPKE--NRQRKSFGKNENLKSQTEV 342
                 244444444444444444444443322..2223333333334444443 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.6   0.0   3.1e-11   2.2e-08       2      99 ..     104     221 ..     103     236 .. 0.72
   2 ?   -1.7   0.0       5.3   3.7e+03      16      52 ..     277     315 ..     272     321 .. 0.67

  Alignments for each domain:
  == domain 1  score: 34.6 bits;  conditional E-value: 3.1e-11
                 EEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSS.........................STTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHT CS
         AAA   2 llyGppGtGKTllakavakelgvefleisgsellsk.........................yvgesekkirelfkeakekakpsilfiDEidalaksrs 75 
                 +l+GppG+GKT++++ +a+e+g++++e s +  +                           y +   ++  +  k+  ++++++ +++DE+  l k+  
  EPX73323.1 104 VLSGPPGCGKTTTVRLLAHEMGASLVEWSNPMDTRLinqehdyeqfslsekfrrfmslaetYPELELSSSTKAPKKTNSSEEKKFILLDELPHLSKQT- 201
                 79**********************999999866633566899999988888888886666554444455555555444443679**********7777. PP

                 TCCCHHHHHHHHHHHHHHHHTTTS CS
         AAA  76 gseseeeervvnqLlteldgvkkk 99 
                     +  +   ++Ll++l+   ++
  EPX73323.1 202 ----GTLQMFREVLLSALQSRGSY 221
                 ....66777777777777777764 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 5.3
                 HHHHHHHTHE..EEEEETTTCSSSSTTHHHHHHHHHHHH CS
         AAA  16 kavakelgve..fleisgsellskyvgesekkirelfke 52 
                 ka+ + l+ e  +++ + s ++++++++se ++r  +++
  EPX73323.1 277 KAIDNILKKEkiLVQSKSSAFIQELISASEGDLRSALNA 315
                 555555542222577777777799999999999988765 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.0   2.9e-08     2e-05       6     130 ..     101     228 ..     100     232 .. 0.75

  Alignments for each domain:
  == domain 1  score: 24.9 bits;  conditional E-value: 2.9e-08
      AAA_22   6 gilvvtGesGtGKTtllrrlleqldeeakaee.erpevvfvtlpsstsskdllrellralglelkaerlsseellealeqalraravielliiDEaqhl 103
                 ++lv+ G++G+GKTt++r l+++   ++  e+ ++ ++ +++  ++ ++ +l +++ r++ l   +++l+++   +a  +  ++  + +++++DE  hl
  EPX73323.1 101 RLLVLSGPPGCGKTTTVRLLAHEMG-ASLVEWsNPMDTRLINQEHDYEQFSLSEKFRRFMSLAETYPELELSSSTKAPKKTNSSEEK-KFILLDELPHL 197
                 5799******************983.4555557777777888888888888888888888887777777777777555555555555.7********** PP

      AAA_22 104 r.s...eealeeL..rsllnl.srkgvqliLvGt 130
                 + +    ++++e+  +    l sr + ++iLv t
  EPX73323.1 198 SkQtgtLQMFREVllSA---LqSRGSYSIILVLT 228
                 66256688888873333...24699999999876 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.0   1.5e-07    0.0001      25     113 ..     101     202 ..      87     243 .. 0.67

  Alignments for each domain:
  == domain 1  score: 22.8 bits;  conditional E-value: 1.5e-07
      AAA_16  25 elvllsGesGvGKsslvrellralekd..................ggif.lrgkcdqlesaipysalaqalareellrqlldeaesaeleawrekleea 104
                 +l++lsG++G+GK++ vr l++++ ++                  +  f l++k++++        la++  + el    ++++++++ e+ +  l+++
  EPX73323.1 101 RLLVLSGPPGCGKTTTVRLLAHEMGASlvewsnpmdtrlinqehdYEQFsLSEKFRRF------MSLAETYPELELSSSTKAPKKTNSSEEKKFILLDE 193
                 899*******************999998888888766555555542233355555555......44777777777777777667776666666666666 PP

      AAA_16 105 laavpelag 113
                 l   ++ +g
  EPX73323.1 194 LPHLSKQTG 202
                 663333333 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   6.2e-07   0.00043       3      80 ..     104     193 ..     102     268 .. 0.65

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 6.2e-07
      AAA_28   3 vitGgestGKTtlleaLaar.gypvv...pEaareileeklakgedalpwv.edllafaervleeqleeeaaa.......aankvlfcDr 80 
                 v++G++++GKTt+++ La + g + v     + +++++++++ ++  l +  ++++ +ae   e +l+  ++a       +++k++++D 
  EPX73323.1 104 VLSGPPGCGKTTTVRLLAHEmGASLVewsNPMDTRLINQEHDYEQFSLSEKfRRFMSLAETYPELELSSSTKApkktnssEEKKFILLDE 193
                 99****************655666553325555556666654444445555588888888777777776666655555555566666665 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   9.3e-07   0.00064       2      78 ..     103     198 ..     102     207 .. 0.61

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 9.3e-07
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------.....................G-SEEEEESGGG-- CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar.....................egeilvlDEverae 78 
                 ++L GppG+gK++ ++ la+ +++++++  ++ dt  + + ++ ++++   s +   ++  a+                     e++ ++lDE+ +++
  EPX73323.1 103 LVLSGPPGCGKTTTVRLLAHEMGASLVEWSNPMDT--RLINQEHDYEQFSLSEKFRRFMSLAEtypelelssstkapkktnsseEKKFILLDELPHLS 198
                 689*******************8888777666555..3455555553222222222222222234444455555566677777777777777766555 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0   2.1e-06    0.0014       3      77 ..     101     205 ..     100     242 .. 0.64
   2 ?   -2.6   0.0       7.5   5.2e+03      16      35 ..     272     290 ..     265     315 .. 0.64

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 2.1e-06
      AAA_14   3 kilvitGaRrvGKTtllkqlikell......vkkesilyinldderd.....kkladpekllelileklke..............ekktylflDEiqev 76 
                 ++lv++G+  +GKTt ++ l++e         ++ ++  in +++ +     +k++ + +l e + e+  e              e+k++++lDE  ++
  EPX73323.1 101 RLLVLSGPPGCGKTTTVRLLAHEMGaslvewSNPMDTRLINQEHDYEqfslsEKFRRFMSLAETYPEL--ElssstkapkktnssEEKKFILLDELPHL 197
                 6799****************988879996664444444454444333333332222222333333333..03446678889999999********9888 PP

      AAA_14  77 .......p 77 
                        +
  EPX73323.1 198 skqtgtlQ 205
                 44444433 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 7.5
      AAA_14  16 Ttllkqlikellvkkesily 35 
                 Tt++k+ i++ l kke+il 
  EPX73323.1 272 TTFMKKAIDNIL-KKEKILV 290
                 566666665555.4444443 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0     1e-06    0.0007      36      68 ..     103     135 ..      89     145 .. 0.90

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 1e-06
      RuvB_N  36 vllyGpPGlGkttlakiiakelgvklkitsgPv 68 
                 ++l+GpPG Gktt  +++a+e+g++l   s P+
  EPX73323.1 103 LVLSGPPGCGKTTTVRLLAHEMGASLVEWSNPM 135
                 5799**********************9999997 PP

>> AAA_assoc_2  AAA C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   1.3e-06   0.00091      10      77 ..     296     368 ..     289     369 .. 0.78

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 1.3e-06
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXXXXXXXXXXXXXXXXXXXXXXXHHHHHHHHH CS
  AAA_assoc_2  10 dalealaeladGDaRkaLnlLElaaeaaeak.....egkieitledleealqrkalryDkagdehYdliSAlh 77 
                    ++ l+++++GD R+aLn+L++ + +++++     ++++  ++ ++ + +++   r+  ++d+ Y  +S ++
   EPX73323.1 296 AFIQELISASEGDLRSALNALQFYLPKENRQrksfgKNENLKSQTEVSTEASEMLNRIASKKDSPYSALSTFQ 368
                  56899*****************999888776788875555555666666667777888888899999888885 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   6.9e-06    0.0048       2     100 ..     107     215 ..     106     236 .. 0.67

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 6.9e-06
                 E-TTSSHHHHHHHHHHHHTEEEEEHHHHHH.HHHHTTT......SHSSHHHHC...TSHHHHHHHHHHHHHHHHHHHHHSSEEEEEE-SEEEETTEEEE CS
      AAA_17   2 GgPGsGKgtqceklvekygfthlsaGdllr.eeakrgg......lakardemr...klpleekkelqkeaaekiaeeakkkgvlvdghprikeqagfld 90 
                 G+PG+GK+t ++ l++++g + ++ +  +    ++++       l++++ +++   + + e +     +a +k +  ++kk +l+d  p + +q g l+
  EPX73323.1 107 GPPGCGKTTTVRLLAHEMGASLVEWSNPMDtRLINQEHdyeqfsLSEKFRRFMslaETYPELELSSSTKAPKKTNSSEEKKFILLDELPHLSKQTGTLQ 205
                 9************************998874444444244455566666666633323333334444566666666556666799******99999999 PP

                 SSHHHHHHHH CS
      AAA_17  91 glpkevleel 100
                  + +  l  l
  EPX73323.1 206 MFREVLLSAL 215
                 8876555444 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0     1e-05    0.0069       1      59 [.     102     159 ..     102     227 .. 0.80
   2 ?   -1.5   0.0       3.7   2.5e+03      41      66 ..     332     357 ..     310     363 .. 0.72

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 1e-05
      AAA_33   1 lvllvGlpGsGKstlaerllkklgavllssdtlrr.rlfgtdqqsktdytrvldrlyqil 59 
                 l++l G+pG+GK+t ++ l+ + ga l++  + ++ rl  + q+++ ++  +++++++++
  EPX73323.1 102 LLVLSGPPGCGKTTTVRLLAHEMGASLVEWSNPMDtRLI-N-QEHDYEQFSLSEKFRRFM 159
                 67899********************99998886663444.3.334445555666665555 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 3.7
      AAA_33  41 dqqsktdytrvldrlyqilnelarka 66 
                 ++++++ +t+v++++ ++ln++a k+
  EPX73323.1 332 KNENLKSQTEVSTEASEMLNRIASKK 357
                 34455678889999999998888775 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   2.3e-05     0.016       2      32 ..     104     133 ..     103     160 .. 0.79
   2 ?   -2.4   0.0       8.8   6.1e+03       9      22 ..     556     569 ..     555     579 .. 0.72

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 2.3e-05
  RNA_helicase   2 wlyGpsgeGKStlakeLakallkklklkkkd 32 
                   +l+Gp+g+GK+t+++ La+++  +l  ++++
    EPX73323.1 104 VLSGPPGCGKTTTVRLLAHEMGASL-VEWSN 133
                   79*******************9887.44444 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 8.8
  RNA_helicase   9 eGKStlakeLakal 22 
                   +GKS+++k++ + +
    EPX73323.1 556 CGKSSAIKYVETLI 569
                   8****999954444 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   2.2e-05     0.015       2      29 ..     104     129 ..     103     212 .. 0.77
   2 ?   -1.6   0.0       5.3   3.7e+03      70      93 ..     467     489 ..     401     503 .. 0.67

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 2.2e-05
      AAA_18   2 lltGtpGvGKttlakeLskrlgfgvnlr 29 
                 +l+G+pG+GKtt  + L+ ++  g  l 
  EPX73323.1 104 VLSGPPGCGKTTTVRLLAHEM--GASLV 129
                 689**************9988..43333 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 5.3
      AAA_18  70 aleegknlvidghlaeleseaakd 93 
                 +++  +n ++d++l+++e ++  d
  EPX73323.1 467 RYGIFEN-YLDSCLNQMEAHSVSD 489
                 4444455.7888888888877655 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.0     9e-05     0.062       2      52 ..     104     160 ..     103     247 .. 0.82
   2 ?   -2.0   0.0       3.4   2.4e+03       9      17 ..     556     564 ..     556     578 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 9e-05
  Viral_helicase1   2 vvhGvpGcGKStlirkllrts...liltvnrptaelltegk...pklpnlsvrtvds 52 
                      v +G pGcGK+t +r l+++    l+  +n++ + l++  +   +++ +++ r+++s
       EPX73323.1 104 VLSGPPGCGKTTTVRLLAHEMgasLVEWSNPMDTRLINQEHdyeQFSLSEKFRRFMS 160
                      78999**********999997876555567777777777776665555555555544 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 3.4
  Viral_helicase1   9 cGKStlirk 17 
                      cGKS++i+ 
       EPX73323.1 556 CGKSSAIKY 564
                      9*****985 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0     3e-05      0.02      25     128 ..     103     209 ..      98     215 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3e-05
  Mg_chelatase  25 lllvGppGsGKtmlakrlpsllpp..lseeealevakiasvagkkeeekllkrrpfraphhsaskaalvGggskpkpGeislahnGvLfLDElpefk 119
                   l+l GppG+GKt   + l+  + +  ++ ++ ++++ i+   + ++ +   k r f +  ++  +  l  + + pk+ + s  ++  ++LDElp+++
    EPX73323.1 103 LVLSGPPGCGKTTTVRLLAHEMGAslVEWSNPMDTRLINQEHDYEQFSLSEKFRRFMSLAETYPELELSSSTKAPKKTNSSEEKK-FILLDELPHLS 198
                   789*********9998887766541245567888888888777777777888999****************99999999777665.6679******9 PP

  Mg_chelatase 120 rk..vlevLRe 128
                   ++  +l+++Re
    EPX73323.1 199 KQtgTLQMFRE 209
                   87335788877 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   0.00013     0.086      11      35 ..     100     124 ..      92     200 .. 0.87
   2 ?   -1.9   1.5       6.2   4.3e+03      79      96 ..     345     371 ..     293     467 .. 0.59
   3 ?   -1.8   0.0       6.2   4.2e+03      22      39 ..     556     573 ..     556     586 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 0.00013
                 TSEEEEEESTTSSHHHHHHHHTTSS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  11 gekvaivGenGaGKStLlkllagll 35 
                 ++++++ G+ G+GK+t ++lla+++
  EPX73323.1 100 SRLLVLSGPPGCGKTTTVRLLAHEM 124
                 67899****************9875 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 6.2
                 H.........HHHTCHHHHHHHSTTGG CS
                 x.........xxxxxxxxxxxxxxxxx RF
    ABC_tran  79 n.........esdeeiekalsklglke 96 
                 +          +++ ++ als+++ k+
  EPX73323.1 345 EasemlnriaSKKDSPYSALSTFQYKQ 371
                 233334444433344444444444433 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 6.2
                 SSHHHHHHHHTTSS--SE CS
                 xxxxxxxxxxxxxxxxxx RF
    ABC_tran  22 aGKStLlkllagllkpte 39 
                 +GKS+ +k +  l ++++
  EPX73323.1 556 CGKSSAIKYVETLINDEN 573
                 8*******9999887665 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   6.4e-05     0.044       9      46 ..      88     127 ..      81     152 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 6.4e-05
                 HHHHHHHHCH..TEEEEEEESTTSSHHHHHHHHHHHTT-- CS
        TsaE   9 algkklakal..gdvilLeGdLGaGKTtlvrglakalgve 46 
                 a+ + +++++  +++++L+G+ G+GKTt vr la+++g +
  EPX73323.1  88 AIRQWMTENIpfSRLLVLSGPPGCGKTTTVRLLAHEMGAS 127
                 455555555566778**********************987 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   9.2e-05     0.064      22      57 ..      90     124 ..      73     146 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 9.2e-05
      AAA_25  22 rrwlvkgllpagelallaGapgtGKttlaldlalav 57 
                 r+w  +++ p   l +l G+pg+GKtt +  la+++
  EPX73323.1  90 RQWMTENI-PFSRLLVLSGPPGCGKTTTVRLLAHEM 124
                 45555555.999***************999888877 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.2   0.00019      0.13      11      36 ..     101     126 ..      95     236 .. 0.83
   2 ?   -2.7   0.0       9.5   6.6e+03      47      64 ..     271     288 ..     255     360 .. 0.64

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00019
      AAA_19  11 kvllvtaGpGtGKTrvlkhivallve 36 
                 ++l++ ++pG+GKT++++   +++ +
  EPX73323.1 101 RLLVLSGPPGCGKTTTVRLLAHEMGA 126
                 67899************988777655 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 9.5
      AAA_19  47 lvaftgrAakelrerlaa 64 
                 + +f ++A +++ ++ + 
  EPX73323.1 271 ATTFMKKAIDNILKKEKI 288
                 455556666665444332 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00013     0.091      18      44 ..     102     126 ..      94     133 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00013
  Zeta_toxin  18 lillgGqpGAGKselaellkdelerqg 44 
                 l++l+G pG+GK+++ +ll+ e+  + 
  EPX73323.1 102 LLVLSGPPGCGKTTTVRLLAHEM--GA 126
                 6799******************9..44 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00016      0.11     104     156 ..      75     127 ..      59     154 .. 0.84
   2 ?   -2.5   0.0       3.1   2.1e+03      10      56 ..     258     304 ..     251     322 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00016
       T2SSE 104 tlddlgaeealkekiaevlrkavrerglilvsGgTgsGKttllyallkeinks 156
                 + ++l++++   ++i++ + + +    l+++sG+ g GKtt++  l +e+ +s
  EPX73323.1  75 KSSELAVHKGKVNAIRQWMTENIPFSRLLVLSGPPGCGKTTTVRLLAHEMGAS 127
                 55677777778899999999999999****************99888887665 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 3.1
       T2SSE  10 ddekvsdihvekpervkvrervdgielreveelekaalerlisriaa 56 
                 ++++vs i +++  + ++++ +d+i  +e   ++++  +++ + i a
  EPX73323.1 258 EHHHVSIIQMNPIATTFMKKAIDNILKKEKILVQSKSSAFIQELISA 304
                 66777888888888888888888866666666666665555555544 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1    0.0002      0.14       1      25 [.     101     125 ..     101     232 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.0002
                 SCEEEEC-TTTCHHHHHHHHHHHHC CS
       NACHT   1 rlvilqGeaGsGKTtLlqklalawa 25 
                 rl++l G++G+GKTt ++ la+++ 
  EPX73323.1 101 RLLVLSGPPGCGKTTTVRLLAHEMG 125
                 689***************9999876 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00026      0.18      19      40 ..     101     122 ..      82     132 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00026
      AAA_30  19 rvavltGpAGtGKttalkalre 40 
                 r+ vl Gp+G GKtt+++ l++
  EPX73323.1 101 RLLVLSGPPGCGKTTTVRLLAH 122
                 589**************99875 PP

>> Hfx_Cass5  Integron Cassette Protein Hfx_Cass5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.5   0.00033      0.23      15      58 ..     490     536 ..     482     541 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00033
   Hfx_Cass5  15 ilvlasggreeyqyiyreaaevkW...ddnlkaltsPvPreWsyldW 58 
                 il +a  +  +y+y yr+     W      l  l sPvPr W  l++
  EPX73323.1 490 ILSFADTMAVDYPYSYRADEMSLWfaiQGTLWYLPSPVPRKWRQLKF 536
                 6778999**********998888833334566678*******98865 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.0    0.0016       1.1       2      23 ..     103     124 ..     102     130 .. 0.85
   2 ?   -1.2   0.0       2.4   1.6e+03      81     135 ..     171     230 ..     143     243 .. 0.62
   3 ?   -1.1   0.0       2.2   1.5e+03     114     130 ..     275     291 ..     269     327 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.0016
                 EEEE--TTSSHHHHHHHHHHHH CS
    NTPase_1   2 vfiTGppGvGKtTlvkkvlell 23 
                 ++++GppG GKtT v+ +++++
  EPX73323.1 103 LVLSGPPGCGKTTTVRLLAHEM 124
                 579************9888765 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 2.4
                 HHHHHHHHHHHHHHHH-EEEE---STTGGG...-HHHHHHHHHHHT..TTSEEEEE--SS CS
    NTPase_1  81 feelalealrkalseadviviDEiGkmElk...skkfkeaveevLk..sekpvlavihrr 135
                  ++  +++ +++ +e+  i++DE   +  +    + f+e +  +L+   +  ++ v+ ++
  EPX73323.1 171 SSSTKAPKKTNSSEEKKFILLDELPHLSKQtgtLQMFREVLLSALQsrGSYSIILVLTET 230
                 555555555666677778888887777664111466777777777743344555555555 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 2.2
                 HHHHHHHHHTTTSEEEE CS
    NTPase_1 114 fkeaveevLksekpvla 130
                 +k+a++++Lk+ek+++ 
  EPX73323.1 275 MKKAIDNILKKEKILVQ 291
                 57889999999987764 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   7.1   0.00011     0.077       8     185 ..      87     357 ..      81     448 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 0.00011
      AAA_11   8 eaiksalsese....itliqGPPGtgKTktivellsqll......................................sr...........rkseeeksa 53 
                 +ai++ ++e+     + +++GPPG+gKT+t+  l +++                                       ++            k+ ++ ++
  EPX73323.1  87 NAIRQWMTENIpfsrLLVLSGPPGCGKTTTVRLLAHEMGaslvewsnpmdtrlinqehdyeqfslsekfrrfmslaeTYpelelssstkaPKKTNSSEE 185
                 556555555555555899********************9899999998888888887777777776666666655550044555544433226777888 PP

      AAA_11  54 kpriLvCapSNaAvDellerllr.glldsegekykpkivRvgneeeriseavksvsleekvekrlekee.................kaqlakeiskele 134
                 k+ iL+    + +    +++++r  ll++  ++ + +i+ v  e ++i+++ ++++ +e  +  +   +                 ++ ++k i++ l+
  EPX73323.1 186 KKFILLDELPHLSKQTGTLQMFReVLLSALQSRGSYSIILVLTETKQINSEGNNFQEKELNSGTQILGPdlvehhhvsiiqmnpiaTTFMKKAIDNILK 284
                 888899888888888888888886666777777788888888888888888888885555555555555888888888888777763333333333333 PP

      AAA_11 135 klakelrafeeeeek......................eklkkskekskskleqerrklkkerkelskeleeae 185
                 k++  ++++++ + +                      ++ ++ k++ k+++ +++++++ e++e+ +++ +++
  EPX73323.1 285 KEKILVQSKSSAFIQelisasegdlrsalnalqfylpKENRQRKSFGKNENLKSQTEVSTEASEMLNRIASKK 357
                 3333333333333335555787888878888888887555555555555555556666666666665555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (589 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       990  (0.0552178); expected 358.6 (0.02)
Passed bias filter:                      468  (0.026103); expected 358.6 (0.02)
Passed Vit filter:                        71  (0.00396006); expected 17.9 (0.001)
Passed Fwd filter:                        26  (0.00145016); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              26  [number of targets reported over threshold]
# CPU time: 0.69u 0.29s 00:00:00.98 Elapsed: 00:00:00.48
# Mc/sec: 3721.26
//
Query:       EPX73324.1  [L=536]
Description: F1-ATPase alpha subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-70  237.6   0.0    1.5e-70  237.2   0.0    1.2  1  ATP-synt_ab    ATP synthase alpha/beta family, nucleotide-bin
      2e-45  154.2   0.0    3.3e-45  153.5   0.0    1.4  1  ATP-synt_ab_C  ATP synthase alpha/beta chain, C terminal doma
    4.8e-16   59.0   0.9    1.4e-15   57.5   0.9    1.9  1  ATP-synt_ab_N  ATP synthase alpha/beta family, beta-barrel do
  ------ inclusion threshold ------
       0.17   11.3   0.0       0.42   10.0   0.0    1.6  1  TniB           Bacterial TniB protein


Domain annotation for each model (and alignments):
>> ATP-synt_ab  ATP synthase alpha/beta family, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  237.2   0.0   3.4e-74   1.5e-70       1     213 []     177     400 ..     177     400 .. 0.96

  Alignments for each domain:
  == domain 1  score: 237.2 bits;  conditional E-value: 3.4e-74
                  SSHHHHHHS-EBTT-EEEEEESTTSSHHHHH.HHHHHHSSTS.......S.EEEEEEESEEHHHHHHHHHHCHHSSGGGGEEEEEEETTS-HHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxx.......x.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab   1 GirvlDalfpivqGqrtlipgafgvGktvis.qslskqsnsd.......d.aiiyvgiGergnevaevleefpegtimkrtvlvantsnepvaareas 89 
                  G++++D+++pi++Gqr+li+g++++Gkt+i+ ++++++++ +       + +++yv++G+++++va++++++++++++k++v++a+t++e++ +++++
   EPX73324.1 177 GMKAIDSMVPIGRGQRELIIGDRQTGKTAIAmDAILNHKRWNsgndeskKlYCVYVAVGQKRSTVAQLVQKLEQNDALKYSVVIAATASESAPLQYLA 274
                  89****************************999999886555788899768*********************************************** PP

                  HHHHHHHHHHHHHTTSEEEEEEETHHHHHHHHHHHHHHTTTSBEGGGSBTTHHHHHHHHHTTSEEE..TSSEEEEEEEEEEE-GGCSTTSHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab  90 iytgitlAEyfrdqgknvlliadslsrwaeAlreislrlgempadqgypaylgaklaslyERagka..pdrtGsvtivaavspaggDfsdpvttatlg 185
                  ++tg++++E+frd+gk+ l+ +d+l+++a A+r++sl+l+++p+++++p+++++ +++l+ER++k+  ++  Gs+t++++++++ggD+s++++t++++
   EPX73324.1 275 PFTGCAIGEWFRDNGKHGLVTYDDLTKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERSAKMskEHGGGSLTALPVIETQGGDVSAYIPTNVIS 372
                  ******************************************************************655559************************** PP

                  HSSEEEEB-HHHHHTTBSSSBCTTTEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab 186 itdgfivLdkklaqrkhfPainvlvSvS 213
                  itdg+i+L+++l+ ++++Painv+ SvS
   EPX73324.1 373 ITDGQIFLESELFYKGIRPAINVGLSVS 400
                  **************************99 PP

>> ATP-synt_ab_C  ATP synthase alpha/beta chain, C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.5   0.0   7.4e-49   3.3e-45       1     126 []     407     532 ..     407     532 .. 0.99

  Alignments for each domain:
  == domain 1  score: 153.5 bits;  conditional E-value: 7.4e-49
  ATP-synt_ab_C   1 QtkamkkvagsLklelaqYrEleaFaqFgsdLDeatkkqLerGerlvelLkQkqysplsveeqviilyaatngllddipvekvkefekelleylee 96 
                    Q+kamk+vag++kl laqYrE+++FaqFgsdLD+ t+++LerG rl+elLkQ+qyspl veeqv i+ya+ +g+ld+ipv++v efe+++l +l++
     EPX73324.1 407 QVKAMKQVAGQIKLFLAQYREVASFAQFGSDLDAGTRATLERGLRLTELLKQPQYSPLGVEEQVPIIYAGVKGYLDRIPVARVVEFEQKFLPFLKS 502
                    9*********************************************************************************************** PP

  ATP-synt_ab_C  97 ekkeileeieekkklsdeleeklkeaikef 126
                    + +++ e+i++++ ls ++eeklk +++ef
     EPX73324.1 503 SGSDVTEAIRTEGVLSPATEEKLKGLLNEF 532
                    ************************999987 PP

>> ATP-synt_ab_N  ATP synthase alpha/beta family, beta-barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.5   0.9   3.2e-19   1.4e-15       3      68 ..      54     119 ..      52     120 .. 0.97

  Alignments for each domain:
  == domain 1  score: 57.5 bits;  conditional E-value: 3.2e-19
                    EEETTEEEEESSTSCETCTTEEEEECCETCSTEEEEEEEEEETTEEEEEESS-STTBBTTSEEEEE CS
  ATP-synt_ab_N   3 qviGpvvdvefgigrlpgiynalevelvefgtlllgvalnlgedkVrvivmgstdGlsrGteVkrT 68 
                     ++G v+++++gi+r+ g+ n+ + el ef+++++g+alnl+ d+V+++ +g+++ +++G+ VkrT
     EPX73324.1  54 MESGRVLSIGDGIARVSGLSNVQAEELIEFSSGVKGMALNLEADTVGCVLFGNDRLVREGDVVKRT 119
                    689**************************************************************9 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   9.3e-05      0.42      26      82 ..     181     239 ..     168     265 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 9.3e-05
        TniB  26 LleypkrkrmpnlllvGdsnnGKtmivekFarlhppekdedae..kvpvlvvqappkpd 82 
                 + ++ +  r +  l++Gd ++GKt+i+     +h++ ++ ++e  k+  ++v + +k +
  EPX73324.1 181 IDSMVPIGRGQRELIIGDRQTGKTAIAMDAILNHKRWNSGNDEskKLYCVYVAVGQKRS 239
                 5556666788889***************9999999877644431155666666655544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (536 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       480  (0.0267723); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 3559.86
//
Query:       EPX73325.1  [L=836]
Description: dipeptidyl peptidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.6e-55  187.1   0.2    4.9e-55  186.7   0.2    1.2  1  DPPIV_N       Dipeptidyl peptidase IV (DPP IV) N-terminal reg
    1.9e-27   96.1   0.0    3.2e-27   95.4   0.0    1.4  1  Peptidase_S9  Prolyl oligopeptidase family
    0.00019   21.1   0.0     0.0006   19.4   0.0    1.5  1  DLH           Dienelactone hydrolase family
  ------ inclusion threshold ------
      0.022   14.7   0.0       0.22   11.4   0.0    2.3  2  BAAT_C        BAAT / Acyl-CoA thioester hydrolase C terminal
       0.92    9.2   4.0        0.8    9.4   0.1    2.7  3  Corona_NS3b   ORF3b coronavirus protein


Domain annotation for each model (and alignments):
>> DPPIV_N  Dipeptidyl peptidase IV (DPP IV) N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  186.7   0.2   1.4e-58   4.9e-55       1     354 []     179     535 ..     179     535 .. 0.90

  Alignments for each domain:
  == domain 1  score: 186.7 bits;  conditional E-value: 1.4e-58
                 TTTSSEEEEEECEEEESSSEETTEEEEEETTTEECEEEETTTT.BSEEEEESSTTEEEEEETTEEEEESTTTSEEEECES-S.TTTEEESB--HHHHHH CS
     DPPIV_N   1 spdgkflllatnaeknwRhsytaeyyiydletneveelspgeeklqlakwSPagdklafvrnnnLyvrelatgkeiqlTsdg.sagifnGvadWvyeEE 98 
                 s+d++++   + ++k+wR+s+++e +i + +t++v++l ++ +++ +a+w+Pag+++afv  +nLyv+e  + + i +T+ + s+ i+nG+adW+yeEE
  EPX73325.1 179 SSDLEYVAYFCGRKKRWRYSVYNEIFILERSTGRVTTLKQN-SQIIVAEWAPAGHRMAFVDGSNLYVWEGFDLPIIPVTEVEeSEYIMNGIADWLYEEE 276
                 7899*************************************.****************************999*******77699************** PP

                 TSSSSBEEEE-TTSSEEEEEEEECTTS-EEEEEESSSSC-...SS-EEEEEE--BTTS---EEEEEEEECTTSCEE..ECS-HHHHCTTCEEEEEEEEC CS
     DPPIV_N  99 vlgsnsavwWspdgsrlaylrfdeseVpeitlpsytdees...qypevksikYPkaGsknpkVelkvvdlasgktv..evqlpdslsekdeyitrvkWt 192
                 +l s +a+wWs dg++l+yl+f++s +p++ +++     +   +  +++ ++YP++G++ p V+l  v+++ ++++  ++ + ++   ++ yi++v+W+
  EPX73325.1 277 ILMSPTALWWSKDGTCLSYLSFNDSLIPKYIISQNVIVPAqgdASANQDLFRYPRPGDPIPIVQLLGVCFSPESVThhHFFTAEESPLDEFYIQDVSWI 375
                 *****************************9998765433333467899999**************99999666655225555555556699******** PP

                 TTSCCEEEEEEETTSTEEEEEEEETTTCCEEEEEEEESSS-S...SS-S-EEE-TTTSSEEEEEEETTSSEEEEEEESSS-C.EEESS-SSS-EEEEEE CS
     DPPIV_N 193 sdeksllvqwlnRsqnrlkvvlvdaetgravvkleetsdgWv...elhdevhflkrdesgflwisekdGfkHLylfdldgkseikqlTsGeweVtsila 288
                 +d+  +++++++R + r     +d++t++ ++  ee+++  +   + +++  ++ ++++g+++ + +   k+L+ f+ d+ +   ++T  +  V   l 
  EPX73325.1 376 QDDS-VMFVETSRGSSRRLTHKYDLTTSSLETLYEEVEKYTLppcSSSQIQSVVWQSKTGYVRYMGNPQRKRLAFFSFDDDN-FVYITPDDLYV---LE 469
                 **99.**************************999999888778886666666555999************************.99*********...99 PP

                 EETTTTEEEEEESSSETTEBEEEEEESS.CTTEEEESSTTTSEEEEEEE-TTSSEEEEEEESSSSSE CS
     DPPIV_N 289 vdekrdlvyFtatkdsPlerhlYsvsle.sggeltrltdeegdhysasfspsgkyyvlkysgpdtpp 354
                 +   ++ +++ta + s+ + ++ + s+e  ++   ++ +++g + s+++sp+++y++l+y gp++p+
  EPX73325.1 470 FWLVEKFIFYTAIRPSSSYVSILCLSTEfAAQVEIEVPPSNGAK-SVKISPDANYMLLNYLGPGIPT 535
                 999999**********************6566667999999999.*******************995 PP

>> Peptidase_S9  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.4   0.0   9.1e-31   3.2e-27      50     210 ..     679     834 ..     677     836 .] 0.94

  Alignments for each domain:
  == domain 1  score: 95.4 bits;  conditional E-value: 9.1e-31
                   HHHHHHHHTTS--GGGEEEEEETHHHHHHHHHHHH-GGG-SEEEEESE---CCCHHCSTTSTHHHCCCC--TTTCHHHHHHHHHH-CGGG-----EE CS
  Peptidase_S9  50 aaaealakegyvdserlaitGgSyGGyltgaalnqrpdlFkaavaevpvvdvlrydsdtdllteeymewgnpeeneegykelspyspldnvkayppl 146
                   +++e+ + + y+d++rl+i+G+S+GGyl++ +l+  +d+ + a+ ++pvvd++ yds    ++e+  +   + + ++ y e+s+++  +n+k+  ++
    EPX73325.1 679 DILEWYTHKPYIDNSRLGIWGWSFGGYLVLKILE-ITDMISSALVVAPVVDWRFYDSY---YAENLLGAYSA-DTKDRY-EQSALHISENIKNIRSI 769
                   5678888899************************.***********************...***99997776.788888.99*************** PP

                   EEEEETT-SSS-THHHHHHHHHHH--S-S.EEEEEETTS-SSTTSSHHHHHHHHHHHHHHHHHCT CS
  Peptidase_S9 147 LlihGlaDdrvppaealklvaaLqkkgkn.vlllifpdegHgvgkprakveelarllaFlkealg 210
                   L+ihG +Dd+v+++++++l + L k++ + +  li p+++H +++ +   + +++++ F+ ++++
    EPX73325.1 770 LIIHGAKDDNVHLENTYHLTSSLIKNNMEnFVQLIIPEANHDFSNIQVYPYLKKKIATFFGSCFQ 834
                   ************************999888**************999999**********99997 PP

>> DLH  Dienelactone hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   1.7e-07    0.0006      86     198 ..     681     821 ..     676     829 .. 0.85

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 1.7e-07
         DLH  86 vaylksvpevstkkvgvvGfCmGGalalllaaevpevdaavafYG...........................lspekeleeaakikapilalfgeeDef 157
                 ++++ ++p+ +++++g+ G+ +GG l+l++    +++  a++  +                            +   +++e  k    il+++g +D  
  EPX73325.1 681 LEWYTHKPYIDNSRLGIWGWSFGGYLVLKILEITDMISSALVVAPvvdwrfydsyyaenllgaysadtkdryEQSALHISENIKNIRSILIIHGAKDDN 779
                 7899**************************99999999999888888888899**************998554444555555555579*********** PP

         DLH 158 ipadevekleealkaanvdlelk.vYpgagHaFandsresyn 198
                 +  +++ +l++ l+++n++  ++ + p+a H F n +   y 
  EPX73325.1 780 VHLENTYHLTSSLIKNNMENFVQlIIPEANHDFSNIQVYPYL 821
                 ************99999886665368*******998776665 PP

>> BAAT_C  BAAT / Acyl-CoA thioester hydrolase C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   6.2e-05      0.22       5      54 ..     676     725 ..     675     766 .. 0.84
   2 ?   -0.3   0.1      0.24   8.6e+02     116     161 ..     767     810 ..     743     814 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 6.2e-05
                 HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSSEEEEEEES- CS
      BAAT_C   5 YFeeainyllrhpkvkkdkigllGiSkGgelalllasflkkisavvling 54 
                 Y+ +++++ +++p++ +++ g+ G S+Gg l+l +  + + is + ++++
  EPX73325.1 676 YWVDILEWYTHKPYIDNSRLGIWGWSFGGYLVLKILEITDMISSALVVAP 725
                 777899***************************99999998888877766 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.24
                 SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT--.--EEEEETTB-S CS
      BAAT_C 116 gpillvvgedDknwpSkesaekaserLkkagkkvevqlltYpkaGH 161
                  +il++ g +D n+  ++    +   L k++ ++ vql+  p+a H
  EPX73325.1 767 RSILIIHGAKDDNVHLENTY-HLTSSLIKNNMENFVQLI-IPEANH 810
                 47999999999999988776.566666666666577776.666666 PP

>> Corona_NS3b  ORF3b coronavirus protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1       0.5   1.8e+03      28      60 ..      53      85 ..      32      94 .. 0.66
   2 ?    9.4   0.1   0.00022       0.8      98     143 ..     174     220 ..     161     245 .. 0.80
   3 ?   -1.4   0.1      0.46   1.6e+03      41      67 ..     464     490 ..     451     501 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.5
  Corona_NS3b 28 vlaleenvvsareasnvtefllaslfvvflaLf 60
                 +   ++n  + r+  ++    + slfv  l L+
   EPX73325.1 53 SNDSRKNARKKRQFIYYSLVGVLSLFVGSLVLY 85
                 344556666666777777777788898888887 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00022
  Corona_NS3b  98 iavvLlgrllylayysyvyktfefiiyntt.tLmfvhGkaayyerks 143
                  +  v+++ l y+ay++ + k++++ +yn    L    G+ + ++++s
   EPX73325.1 174 TQKVVSSDLEYVAYFCGRKKRWRYSVYNEIfILERSTGRVTTLKQNS 220
                  56688999********************7525666778888887777 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 0.46
  Corona_NS3b  41 asnvtefllaslfvvflaLfkassfkr 67 
                    +v+ef l+  f+ + a+  +ss+ +
   EPX73325.1 464 DLYVLEFWLVEKFIFYTAIRPSSSYVS 490
                  568999************999999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (836 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       738  (0.0411624); expected 358.6 (0.02)
Passed bias filter:                      611  (0.0340789); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.75u 0.30s 00:00:01.05 Elapsed: 00:00:00.44
# Mc/sec: 5664.31
//
Query:       EPX73326.1  [L=710]
Description: App1 protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.4e-32  111.0   3.0    1.8e-15   56.2   0.1    2.8  2  SH3_1        SH3 domain
    3.9e-28   97.1   5.2    1.8e-13   50.1   0.2    2.9  3  SH3_9        Variant SH3 domain
    2.7e-26   91.0   0.7    6.6e-12   44.9   0.1    3.1  3  SH3_2        Variant SH3 domain
      8e-18   64.4   0.0    6.6e-17   61.4   0.0    2.2  2  Cofilin_ADF  Cofilin/tropomyosin-type actin-binding protein


Domain annotation for each model (and alignments):
>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.5   0.4   1.4e-18   6.4e-15       1      48 []     583     629 ..     583     629 .. 0.97
   2 !   56.2   0.1     4e-19   1.8e-15       1      48 []     660     705 ..     660     705 .. 0.97

  Alignments for each domain:
  == domain 1  score: 54.5 bits;  conditional E-value: 1.4e-18
                 EESSSBEXSSTTBXEBSTTEEEEEEEECSSSEEEEEETTSTEEEEEEG CS
       SH3_1   1 iAlYDYeaeesdELsfkkGDviivleksedgWwkgrlkgtgkeGliPs 48 
                 +++YDY +ee++E+ +++G++i++++ +++gWw g+  + gk+Gl+Ps
  EPX73326.1 583 VVIYDYSPEEENEIELTEGEKITIIDFVDEGWWLGEKSN-GKQGLFPS 629
                 689***********************************9.6******8 PP

  == domain 2  score: 56.2 bits;  conditional E-value: 4e-19
                 EESSSBEXSSTTBXEBSTTEEEEEEEECSSSEEEEEETTSTEEEEEEG CS
       SH3_1   1 iAlYDYeaeesdELsfkkGDviivleksedgWwkgrlkgtgkeGliPs 48 
                 +A YDYea+e++EL+f + D+i+++++ + +Ww+g+++  g++Gl+Ps
  EPX73326.1 660 KAVYDYEAQEDNELTFYESDIITNVDRIDPNWWEGECH--GRRGLFPS 705
                 79************************************..69*****8 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.72   3.2e+03      37      44 ..      93     100 ..      86     101 .. 0.74
   2 !   50.1   0.2     4e-17   1.8e-13       1      49 []     584     633 ..     584     633 .. 0.98
   3 !   48.4   0.3   1.4e-16   6.1e-13       1      49 []     661     709 ..     661     709 .. 0.99

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.72
       SH3_9  37 tGrtGlvP 44 
                 ++r+Gl+P
  EPX73326.1  93 SSRKGLFP 100
                 799***** PP

  == domain 2  score: 50.1 bits;  conditional E-value: 4e-17
       SH3_9   1 AlypyepreddeLsLqrGDvitvieesedgWlegsl.tGrtGlvPanyve 49 
                 ++y+y p e+ e++L +G+ it+i+  ++gW++g++ +G+ Gl+P+nyve
  EPX73326.1 584 VIYDYSPEEENEIELTEGEKITIIDFVDEGWWLGEKsNGKQGLFPSNYVE 633
                 89*********************************88************7 PP

  == domain 3  score: 48.4 bits;  conditional E-value: 1.4e-16
       SH3_9   1 AlypyepreddeLsLqrGDvitvieesedgWlegsltGrtGlvPanyve 49 
                 A+y+ye++ed eL + + D+it+ ++ ++ W+eg+ +Gr+Gl+P+nyve
  EPX73326.1 661 AVYDYEAQEDNELTFYESDIITNVDRIDPNWWEGECHGRRGLFPSNYVE 709
                 89**********************************************7 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.25   1.1e+03      36      51 ..      84     101 ..      33     106 .. 0.67
   2 !   42.8   0.0   6.7e-15     3e-11       2      55 ..     582     633 ..     581     635 .. 0.95
   3 !   44.9   0.1   1.5e-15   6.6e-12       2      56 ..     659     710 .]     658     710 .] 0.98

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.25
                 TEEEEEE..CCCEEEEEG CS
       SH3_2  36 gwwegev..gGrvGlfPs 51 
                  +w ge     r+GlfP+
  EPX73326.1  84 VSWCGEAapSSRKGLFPI 101
                 567776666789999997 PP

  == domain 2  score: 42.8 bits;  conditional E-value: 6.7e-15
                 EEESS-B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEE.CCCEEEEEGCGEE CS
       SH3_2   2 vraiedyvgedkseLsfkkGdvikvlslgskdsdgwwegev.gGrvGlfPsslve 55 
                 +++i dy +e ++e+++++G+ i ++   +  ++gww+ge+ +G++GlfPs++ve
  EPX73326.1 582 AVVIYDYSPEEENEIELTEGEKITII---DFVDEGWWLGEKsNGKQGLFPSNYVE 633
                 68999*********************...88899********************8 PP

  == domain 3  score: 44.9 bits;  conditional E-value: 1.5e-15
                 EEESS-B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEECCCEEEEEGCGEEE CS
       SH3_2   2 vraiedyvgedkseLsfkkGdvikvlslgskdsdgwwegevgGrvGlfPsslvee 56 
                 v+a+ dy+++  +eL+f + d+i  +   ++++++wwege +Gr+GlfPs++vee
  EPX73326.1 659 VKAVYDYEAQEDNELTFYESDIITNV---DRIDPNWWEGECHGRRGLFPSNYVEE 710
                 799***********************...************************97 PP

>> Cofilin_ADF  Cofilin/tropomyosin-type actin-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.4   0.0   1.5e-20   6.6e-17       2     119 ..      15     131 ..      14     133 .. 0.91
   2 ?   -0.0   0.0      0.16   7.3e+02      12      42 ..     579     611 ..     572     619 .. 0.77

  Alignments for each domain:
  == domain 1  score: 61.4 bits;  conditional E-value: 1.5e-20
                  HHHHHHHCTTT..SSEEEEEEECTT.TEEEEEESS-.HHHHHHHHHHTTT-EEEEEEEEEECCSECCEEEEEEEEE--TTS-HHHHHHHHHHHHHHHH CS
  Cofilin_ADF   2 keafkelksgk.ktkyilfkidddk.eeivveeege.tyeelreelpeseprYavydveyehddeskrsklvfIswvPdsapikqkmlyasskdalkk 96 
                  k+a  ++ +g+ ++++++f++ + + + ++v ++g+ +  e+++e++e+ + Y++++v+ ++ +   + k+v++sw++++ap  +k l+  +++++ +
   EPX73326.1  15 KKAHAQVLNGSpDCSWAVFGYAKGQgNVLKVLATGNdD-YEFLDEFDENAILYGFLRVKDSNTG---LHKFVLVSWCGEAAPSSRKGLFPIHSASVTR 108
                  677788888899********999988999999999966.689*****************66655...******************************* PP

                  HCTTSEEEEEE-CGGCCSHHHHH CS
  Cofilin_ADF  97 elkgisveieatdldelteeelk 119
                   l+g+++++  ++ ++l+ +++ 
   EPX73326.1 109 LLNGYHIQVTGRESSDLNLDDIH 131
                  ******************99986 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.16
                  T.SSEEEEEEECTT.TEEEEEESS-.HHHHHHH CS
  Cofilin_ADF  12 kktkyilfkidddk.eeivveeege.tyeelre 42 
                  k+ + +++ +++++ +ei++ e ++ t+ ++++
   EPX73326.1 579 KTPAVVIYDYSPEEeNEIELTEGEKiTIIDFVD 611
                  456789999999887889998844478788776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (710 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       708  (0.0394891); expected 358.6 (0.02)
Passed bias filter:                      268  (0.0149478); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                        22  (0.00122706); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.93u 0.30s 00:00:01.23 Elapsed: 00:00:00.49
# Mc/sec: 4372.68
//
Query:       EPX73327.1  [L=168]
Description: hypothetical protein SOCG_01078 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       584  (0.0325729); expected 358.6 (0.02)
Passed bias filter:                      247  (0.0137766); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.44
# Mc/sec: 1141.31
//
Query:       EPX73328.1  [L=133]
Description: hypothetical protein SOCG_05818 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.018   15.5   0.0      0.023   15.2   0.0    1.1  1  Glyco_trans_4_4  Glycosyl transferase 4-like domain


Domain annotation for each model (and alignments):
>> Glyco_trans_4_4  Glycosyl transferase 4-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.0   1.3e-06     0.023      44     107 ..      33      99 ..      28     122 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.3e-06
  Glyco_trans_4_4  44 rlpvprrpspladlaalralrrll.rqrrerpdvvhahspt..aglaarlarrrrgiplvvtlhgll 107
                      ++p+p++  +l++l++++ l +++ + +r  p + h+hs++  +++  +l r+  g  l+ +l + +
       EPX73328.1  33 SIPIPPSTTLLRRLSFITLLCSFVpSTDRSSPSLTHTHSFPahTNGTSLLGRCHLGSQLIWHLNAGW 99 
                      689**********************99************6546899999999999999999987654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       268  (0.0149478); expected 358.6 (0.02)
Passed bias filter:                      210  (0.0117129); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.27s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 948.77
//
Query:       EPX73329.1  [L=497]
Description: transcription factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-07   31.5   9.9    2.4e-07   30.8   9.9    1.4  1  Zn_clus   Fungal Zn(2)-Cys(6) binuclear cluster domain


Domain annotation for each model (and alignments):
>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   9.9   1.3e-11   2.4e-07       2      37 ..      15      52 ..      14      58 .. 0.86

  Alignments for each domain:
  == domain 1  score: 30.8 bits;  conditional E-value: 1.3e-11
                S-HHHHHCT---ST....SSSS-HHHHHCTHHHCCCCTCC CS
     Zn_clus  2 aCdnCrkkKvKCda....kkPaCsnCkklnleCtfysess 37
                aCd+Cr++K++C a    ++P C  C+k  +eC  +s ss
  EPX73329.1 15 ACDRCRRRKIRCIAsefpNQP-CMACQKAHAECH-FSVSS 52
                9**************666666.************.77776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (497 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       803  (0.0447878); expected 358.6 (0.02)
Passed bias filter:                      265  (0.0147805); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.27s 00:00:00.88 Elapsed: 00:00:00.40
# Mc/sec: 3729.28
//
Query:       EPX73330.1  [L=219]
Description: 26S proteasome regulator [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-27   95.3   1.2    2.7e-27   94.5   1.2    1.4  1  Nas2_N    Nas2 N_terminal domain
    5.2e-06   26.2   0.1    8.6e-06   25.5   0.1    1.5  1  PDZ_6     PDZ domain
    3.6e-05   24.0   0.0    7.5e-05   23.0   0.0    1.5  1  PDZ       PDZ domain
     0.0014   18.9   0.1      0.004   17.5   0.0    1.8  2  PDZ_2     PDZ domain
  ------ inclusion threshold ------
      0.021   14.9   0.3      0.034   14.3   0.3    1.2  1  DUF3276   Protein of unknown function (DUF3276)
        1.6    8.5   6.3       0.23   11.2   1.3    1.8  2  DUF724    Protein of unknown function (DUF724)


Domain annotation for each model (and alignments):
>> Nas2_N  Nas2 N_terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.5   1.2   8.9e-31   2.7e-27       1      77 [.       4      80 ..       4      82 .. 0.97

  Alignments for each domain:
  == domain 1  score: 94.5 bits;  conditional E-value: 8.9e-31
      Nas2_N  1 lkeLekkkdeiekeieelsevLesqnvgmdgplvDeegFPrsDidvvavrtaRnriiclqNDlkelmkeieealael 77
                +k+Lek+k +ie+e++el++vL ++nv+m++plv+++gFPrsDid+ ++r +R++ii l+ND+k++++ei++ l+++
  EPX73330.1  4 FKRLEKQKLNIEEELKELQSVLLRENVTMNTPLVTQDGFPRSDIDITTIRPTRHKIILLRNDYKKVEEEIKKVLEKV 80
                589**********************************************************************9975 PP

>> PDZ_6  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.5   0.1   2.9e-09   8.6e-06       1      25 [.     137     161 ..     137     188 .. 0.84

  Alignments for each domain:
  == domain 1  score: 25.5 bits;  conditional E-value: 2.9e-09
       PDZ_6   1 vVtaVdpgsPAdrAGlrvGDiilsv 25 
                 vV +V  +sPA +AGl+vGD i+s+
  EPX73330.1 137 VVDSVAVDSPAQEAGLCVGDEIISI 161
                 699********************99 PP

>> PDZ  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.0   2.5e-08   7.5e-05      23      61 ..     122     170 ..      98     175 .. 0.77

  Alignments for each domain:
  == domain 1  score: 23.0 bits;  conditional E-value: 2.5e-08
                 S.........SSSSEEEEEECTTSHHHHHTSSTTEEEEEETT.EETTTS CS
         PDZ  23 r.........gdkgifvsevlpggaaeadglkvGDkIlsvNg.vdvenv 61 
                            ++ ++v +v  +++a+ +gl+vGD+I+s+ + ++++++
  EPX73330.1 122 VlqrssilgrPKPFCVVDSVAVDSPAQEAGLCVGDEIISIQNcTSLASL 170
                 24445555567899*********9999999**********554777665 PP

>> PDZ_2  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       2.2   6.5e+03      35      47 ..     104     116 ..      82     133 .. 0.66
   2 !   17.5   0.0   1.3e-06     0.004      16      43 ..     136     163 ..     114     183 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 2.2
                 T-EEEEETTB--S CS
       PDZ_2  35 gDvilkvdgkkvk 47 
                  D+   vdg  ++
  EPX73330.1 104 KDEAANVDGSSLN 116
                 5666666666654 PP

  == domain 2  score: 17.5 bits;  conditional E-value: 1.3e-06
                 EEEEEE-TTSGGGGT.--TT-EEEEETT CS
       PDZ_2  16 vlvvsVkeggPaakaglkagDvilkvdg 43 
                 ++v sV  ++Pa++agl  gD+i+++ +
  EPX73330.1 136 CVVDSVAVDSPAQEAGLCVGDEIISIQN 163
                 67889********************986 PP

>> DUF3276  Protein of unknown function (DUF3276)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.3   1.1e-05     0.034      56     110 ..      55     110 ..      46     127 .. 0.60

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.1e-05
     DUF3276  56 ekHkifLykEDfekFkegleeaieyikeekgeev.iserhqkdfkkeeeeaeeeee 110
                  +Hki L ++D++k +e +++++e + + ++ e  +++  ++++ k++++ e+++ 
  EPX73330.1  55 TRHKIILLRNDYKKVEEEIKKVLEKVLSAEAAESnLTNGASESQLKTSTKDEAANV 110
                 69*********************999877554440332222222222222222222 PP

>> DUF724  Protein of unknown function (DUF724)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.3      0.27   8.1e+02      76      98 ..       3      25 ..       1      35 [. 0.52
   2 ?   11.2   1.3   7.8e-05      0.23      86     147 ..      48     109 ..      36     128 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.27
      DUF724 76 slaeLekhGFdVkalqsrlnkLl 98
                +++ Lek+  +++  ++ l+ +l
  EPX73330.1  3 EFKRLEKQKLNIEEELKELQSVL 25
                44555555555544444444443 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 7.8e-05
      DUF724  86 dVkalqsrlnkLlslkdeqtklleerkklekkieeeesekrkleeeidelekkilelerqla 147
                 d+++++   +k++ l+++++k++ee+kk+ +k+  +e+++++l +  +e + k ++  + + 
  EPX73330.1  48 DITTIRPTRHKIILLRNDYKKVEEEIKKVLEKVLSAEAAESNLTNGASESQLKTSTKDEAAN 109
                 7888888889**********************************999999988877666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1199  (0.0668749); expected 358.6 (0.02)
Passed bias filter:                      668  (0.0372581); expected 358.6 (0.02)
Passed Vit filter:                        69  (0.00384851); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.46u 0.30s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 1568.34
//
Query:       EPX73331.1  [L=1294]
Description: SNF2 family helicase Swr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-62  211.9   0.4    1.8e-62  211.1   0.4    1.3  1  SNF2_N      SNF2 family N-terminal domain
    5.6e-19   68.5   0.0    7.2e-18   65.0   0.1    2.5  2  Helicase_C  Helicase conserved C-terminal domain
    8.8e-12   45.3   0.0    8.8e-12   45.3   0.0    3.2  3  ResIII      Type III restriction enzyme, res subunit
    5.7e-08   33.0   1.4    5.7e-08   33.0   1.4    3.4  3  HSA         HSA
    6.4e-05   22.8   0.0    0.00017   21.4   0.0    1.6  1  DEAD        DEAD/DEAH box helicase


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  211.1   0.4   4.9e-66   1.8e-62      51     349 ..     463     747 ..     448     748 .. 0.87

  Alignments for each domain:
  == domain 1  score: 211.1 bits;  conditional E-value: 4.9e-66
                 HHHTT--EEE---TTS--HHHHHHHHH...HHTTTS---.......S-EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH--------------- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  51 akqsvrGGiLaDemGLGKTvqvlalilaqrakeekdkekkrkdtlagptLivvPaslldqWeneierhvsssalrvlvyggqkkmkkkntkvapkllad 149
                 ++ s+ +GiLaDemGLGKT+q++al++++  ++          +  gp+Li+vP+s++ +We e+++++++ ++  ++++ q++++k+          +
  EPX73331.1 463 LHDSNTNGILADEMGLGKTIQTIALLAHLACEK----------ENWGPHLIIVPTSVMLNWEMEFKKFLPGFKILTYYGNPQERKEKR---AGWYKPDT 548
                 567889*********************554433..........3358**************************988888888755555...44455678 PP

                 --EEEE-HHHHHHHT......TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHHHHHHH-TTTT--HH.......HH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......xx RF
      SNF2_N 150 ydvvittYdvlsreaelqkkrsvlkqvewkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledlygLlkfLreepfgekq.......tf 241
                  +v+it+Y+ + +++      +++ +++w++++lDE+h++kn  s+  + ++++++++r++ltGTP+qn+l +l++Ll fL++   ++ +        f
  EPX73331.1 549 WHVCITSYQLVLQDH------QPFRRKKWQYMILDEAHNIKNFRSQRWQSLLNFNAEHRLLLTGTPLQNNLVELWSLLYFLMPAGVTDANsgfanlkDF 641
                 9***********999......9**********************999999999*****************************9877763336666669* PP

                 HHHTHHHHH..........HHHHHHHHHHHTT-STTEE---GGGT--S---EEEEEEEEE--HHHHHHHH.....................HHHHHH-H CS
                 xxxxxxxxx..........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxx RF
      SNF2_N 242 dkllqrpie..........aqaekgrsrLlqllqrlmlrrakkdveknlPpkteeiiflklskverksYnrllevlrkkalakllkrse.aalksssks 329
                 ++++++p+           ++a   +++L+ +l++++lrr k++vek++P k e++++++lsk +r +Y         ++++  ++r+  a+ ++ s  
  EPX73331.1 642 QDWFSKPMDrlieegsemnEEAMTTVAKLHRVLRPYLLRRLKTEVEKQMPGKYEHVVYCQLSKRQRFLYD--------DFINRARTREIlASGNFMS-- 730
                 ********99******999999999*********************************************........4554444443302334444.. PP

                 HH-HHHHHHHHHHHHH---X CS
                 xxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 330 kekilelllelrqacnhpql 349
                    i+++l++lr++cnhp+l
  EPX73331.1 731 ---IINCLMQLRKVCNHPNL 747
                 ...***************87 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.26   9.3e+02       7      57 ..     488     539 ..     483     556 .. 0.69
   2 !   65.0   0.1     2e-21   7.2e-18       2     111 .]     994    1106 ..     993    1106 .. 0.93

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.26
                 HHHH.HHTTTTSEEEEEESSHHHHHH.HHHHHHHT..TSTEEEESTTSTHHHHHH CS
  Helicase_C   7 lell.kleeeggkilifvntidrlek.vklllekk..gikvavlhgelpqneree 57 
                 l+ l  ++e+ g  li+v+t  +l+  +  + +k+  g+k+++++g  pq+ +e+
  EPX73331.1 488 LAHLaCEKENWGPHLIIVPTSVMLNWeM-EF-KKFlpGFKILTYYG-NPQERKEK 539
                 3333478888899999999999997532.33.34466*********.45555554 PP

  == domain 2  score: 65.0 bits;  conditional E-value: 2e-21
                  HHHHHHHHH.HHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH.TTSSS.EEEESGGGTSSSTSTTESEEEESSSSS CS
  Helicase_C    2 kleallell.kleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfn.kgesd.vLiatdvaerGidipkvnlVinfdlpr 95  
                  kl+ l +ll +l ++g+++lif++ ++ l+ ++ +l+ +g ++++l+g ++ ++r+   e+fn ++++  ++++t+ ++ Gi+++++++Vi++d ++
  EPX73331.1  994 KLQVLDKLLrDLISNGHRALIFTQMTKVLDILEQFLNIHGHRYLRLDGATKIEQRQILTERFNnDDKIPvFILSTRSGGLGINLTGADTVIFYDSDW 1090
                  6778888888899**************998888887888***********************956778899************************** PP

                  SHHHHHHHHTTSSSTT CS
  Helicase_C   96 nvtsyiqriGRtgRag 111 
                  n++   q+ +R +R+g
  EPX73331.1 1091 NPQLDAQAQDRSHRIG 1106
                  **************97 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1      0.67   2.4e+03     140     157 ..     204     221 ..     193     226 .. 0.89
   2 ?   -3.3   3.2       2.2   7.8e+03      61     118 ..     344     397 ..     336     436 .. 0.51
   3 !   45.3   0.0   2.5e-15   8.8e-12       4     169 ..     449     608 ..     447     610 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.67
                 TGGGTTS.TTTHHHHHT- CS
      ResIII 140 EaHrlgakkswreilekf 157
                 EaHrl++k++  +il++ 
  EPX73331.1 204 EAHRLAGKEHLANILKHS 221
                 9******99999999875 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 2.2
                 ESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--.......-SEEEEEHHHHHHTH CS
      ResIII  61 vprkslleqtleefkkflseaykeigkkvsgdkkkakekdstnkkilvttiqsldads 118
                 + ++ + + +  +f++ ls+++ +++ ++ + + k+ ++d+++++    t +sl+ ds
  EPX73331.1 344 ASENGIKKDLNGNFEEALSNKQRNKTSNYGSSRSKN-HEDESENES---TLSSLYDDS 397
                 556667777888888888888765333333222222.222222222...222222222 PP

  == domain 3  score: 45.3 bits;  conditional E-value: 2.5e-15
                 E-HHHHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S......-EEEEESSHHHHHHHHHHGGGGTGG.........GEEEESSS-B-- CS
      ResIII   4 lreyQeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkee.kflflvprkslleqtleefkkflseayke.....igkkvsgdkkka 96 
                 lreyQ+  +e l  +l+ + +++g+++ + G GKT+  ++l ++l+ ++++    l++vp+ s++  ++ efkkfl+   k      +      +++k+
  EPX73331.1 449 LREYQQFGLEWL-TALH-DSNTNGILADEMGLGKTIQTIALLAHLACEKENWgPHLIIVPT-SVMLNWEMEFKKFLPGF-KIltyygN-----PQERKE 538
                 799999888765.5777.899***************9988887777654433699999997.67889*********985.44343221.....222222 PP

                 ..........-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS...TTTHHHHHT---SEEEEEESS- CS
      ResIII  97 ...kekdstnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgak..kswreilekfkeavllglTATp 169
                      ++ +++++++t++q + +d        + ++r++ +++i DEaH+++    + w+++l+  ++  +l lT+Tp
  EPX73331.1 539 kraGWYKPDTWHVCITSYQLVLQDH-------QPFRRKKWQYMILDEAHNIKNFrsQRWQSLLNF-NAEHRLLLTGTP 608
                 334567889**************99.......9*****************99875569***7665.77999999***9 PP

>> HSA  HSA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.0   1.4   1.6e-11   5.7e-08      11      71 .]     117     177 ..     113     177 .. 0.96
   2 ?   -1.6   1.9      0.98   3.5e+03      37      68 ..     176     207 ..     173     209 .. 0.79
   3 ?   -2.1   0.0       1.4   5.1e+03      15      30 ..     213     228 ..     211     233 .. 0.82

  Alignments for each domain:
  == domain 1  score: 33.0 bits;  conditional E-value: 1.6e-11
                 -HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH--XXXXXXXXXXXXXXXXXXX.. CS
         HSA  11 hhdylLeeilwhakdfkeerkskrakakklaravakyhnniekeeqkriereekerlkalk 71 
                  +d +L +i  +a+ +++erk ++++a+k++ +++ ++++  ++++++ ++eek+ + ++k
  EPX73331.1 117 YRDNFLSHIHGLARYMHNERKVRASRARKVSGMILGHFKRLSGADERKAKEEEKRIRLLAK 177
                 6799***************************************************998876 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.98
                 HHHHHHHHHHHH--XXXXXXXXXXXXXXXXXX CS
         HSA  37 akklaravakyhnniekeeqkriereekerlk 68 
                 ak+ a  + k ++  e+e  +r  +++ e  +
  EPX73331.1 176 AKRTAWEIRKKWKVVEREVRRRRVERAEEAHR 207
                 78888899999999999999998888877555 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 1.4
                 HHHHTTHHHHHHHHHH CS
         HSA  15 lLeeilwhakdfkeer 30 
                  L+ il h++d+ e+r
  EPX73331.1 213 HLANILKHSTDLLEAR 228
                 68999******99987 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.0   4.7e-08   0.00017      15     146 ..     468     594 ..     454     612 .. 0.71

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 4.7e-08
                 CEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTT...CSEEEEEHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxx RF
        DEAD  15 gdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldng...vdivvgtpgrldd 110
                  + ++a e G GKT    i++l++++  ++++    li++Pt   + +   ++kkf+     ++l  +g+ ++r+++++   +    ++ ++  + +++
  EPX73331.1 468 TNGILADEMGLGKTIQT-IALLAHLAC-EKENWGPHLIIVPTSV-MLNWEMEFKKFLPG--FKILTYYGNPQERKEKRAGWYKpdtWHVCITSYQLVLQ 561
                 566788899*****985.555555554.3555556788889865.5567889******7..66877888777766666664442336777777666665 PP

                 HHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 111 llstgklnlsqvrflVlDEadrlldqgfsdfinril 146
                   + + ++ ++ ++++lDEa+++ +  +s+ ++++l
  EPX73331.1 562 --DHQPFRRKKWQYMILDEAHNIKNF-RSQRWQSLL 594
                 ..5567889*************9987.555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1294 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1645  (0.0917508); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.96u 0.28s 00:00:01.24 Elapsed: 00:00:00.48
# Mc/sec: 8026.58
//
Query:       EPX73332.1  [L=1243]
Description: C2 domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.7e-26   91.1   7.2    1.1e-23   84.0   2.3    4.0  4  Membr_traf_MHD  Munc13 (mammalian uncoordinated) homology dom
    2.7e-09   37.2   0.0      7e-09   35.9   0.0    1.8  1  C2              C2 domain
     0.0011   17.6   3.8      0.003   16.2   0.1    2.6  3  DUF810          Plant family of unknown function (DUF810)
  ------ inclusion threshold ------
       0.53   10.6   6.5        5.4    7.4   0.1    3.4  3  RNA_pol_Rpb4    RNA polymerase Rpb4


Domain annotation for each model (and alignments):
>> Membr_traf_MHD  Munc13 (mammalian uncoordinated) homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       2.4   1.1e+04      26      69 ..     234     276 ..     232     313 .. 0.62
   2 ?   -3.0   0.0       1.7   7.5e+03      44      66 ..     563     585 ..     555     619 .. 0.66
   3 ?   -3.2   0.0       1.9   8.6e+03      36      60 ..     953     987 ..     943    1019 .. 0.54
   4 !   84.0   2.3   2.5e-27   1.1e-23       2     148 ..    1022    1134 ..    1021    1135 .. 0.96

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 2.4
  Membr_traf_MHD  26 LkrvlkelWkvvlnalekllLPplsdakskkkssslwenanaak 69 
                     + +v k + ++vl  +e+ + P+++++ + k  ++l ++ ++++
      EPX73332.1 234 FASVFKVAYSKVLLDAEN-MFPTIDESAIYKDITILIDDLENDT 276
                     677788888888888888.8888888888775555555554443 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.7
  Membr_traf_MHD  44 llLPplsdakskkkssslwenan 66 
                     ++LP+  ++ +k ++ +l++na+
      EPX73332.1 563 VVLPNYITSAMKVTKAHLQSNAK 585
                     88888877777666666544432 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 1.9
  Membr_traf_MHD  36 vvlnalekllLPplsdakskk..........ksss 60 
                      ++n+++ ++  +ls ++ +k          k+++
      EPX73332.1 953 FIVNKMDPVISQNLSMSTLRKllsgswmdfdKTMT 987
                     56666666666666666655555543333332222 PP

  == domain 4  score: 84.0 bits;  conditional E-value: 2.5e-27
  Membr_traf_MHD    2 vlrPLmdyLdsnLsilaqalektvLkrvlkelWkvvlnalekllLPplsdakskkkssslwenanaakkleslsklllsmvreevsgfeksLt 94  
                      +++ L+d++d+n+s++a+ l+k+v+  v+  +W+ v+ ++e llLPp+s + +                              e     k+L+
      EPX73332.1 1022 AINDLLDFFDVNFSVIARHLSKDVFVTVMSYVWDEVMCTIEDLLLPPVSAKPI------------------------------E----RKPLS 1080
                      7999*******************************************999885..............................3....69*** PP

  Membr_traf_MHD   95 pkevevleaaLdtlkdfFhagGeGlkkeaLkseelqsLllalslYdqstdeLik 148 
                      + + +++ ++L++lkd+ ha+GeG++++ L +e++q+Ll++ ++Yd+stdeL++
      EPX73332.1 1081 ESQLKIVYSWLQFLKDYLHANGEGVNLSVLETEHYQELLKIHEYYDKSTDELLE 1134
                      ****************************************************87 PP

>> C2  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.9   0.0   1.6e-12     7e-09       4      90 ..     814     898 ..     811     913 .. 0.88

  Alignments for each domain:
  == domain 1  score: 35.9 bits;  conditional E-value: 1.6e-12
                 EEEEEEEESSSSSSTTSSCEEEEEEEE.ECEEEEEE-SCSSSSSSEEEEEEEEEESCHTTSEEEEEEEEECSSSTEEEEEEEEEEGHH CS
          C2   4 evtvieAknLpnkdkkgssdpyvkvsl.dgkqkakTrviknslnPvWnekftfevaeleeakLeveVfdndrlskddfiGkveiplst 90 
                 +v+vi+++nL++ d ++   +yv+++  +gk+++kTr i++  nP+W+ +f+++ ++  +  ++  ++++ +++++++ G++++pl+ 
  EPX73332.1 814 TVKVIRGENLQPDDTGKIRTSYVVLTDnRGKRIGKTRPIHSM-NPRWDDTFEIKAKD--SLIITANLWSKGKFGDHEIFGRCSFPLTP 898
                 79********99999888999****999*********66666.**********9999..9999**********************987 PP

>> DUF810  Plant family of unknown function (DUF810)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0     0.012        54     129     150 ..     284     305 ..     279     319 .. 0.89
   2 !   16.2   0.1   6.8e-07     0.003     521     619 ..     621     722 ..     566     784 .. 0.75
   3 ?   -3.5   0.3      0.59   2.7e+03     331     393 ..    1117    1181 ..    1113    1182 .. 0.64

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.012
      DUF810 129 sdFsdekeyeaWqkRqlkiLea 150
                  dFs+ k+y   ++R+l+iLe+
  EPX73332.1 284 LDFSNYKAYSTYKTRELQILEQ 305
                 59******************97 PP

  == domain 2  score: 16.2 bits;  conditional E-value: 6.8e-07
      DUF810 521 evesvianlvkkWvkerlkklkewveraleqEtWePkskqeryaqSavellriieetvdeffelpv...pmkeellqdLldgldkllqeYlskvasslg 616
                 + e + +++v +W+++   ++++w+eral++ + + + k+   ++S+++l++  ++ +  +++++     ++   + + ++ +  +l +Y+s + +   
  EPX73332.1 621 NFEGFFQPFVDSWLNNVEVNANDWLERALQKDKFDTLNKEAACSSSIIDLFHAFHQSLRTLMNFEWedaLCNARFFTKFFRIVYMVLSKYTSWALKTFF 719
                 45667899************************************************9999999886555799999999999999999999988776665 PP

      DUF810 617 ske 619
                 + +
  EPX73332.1 720 DEA 722
                 555 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 0.59
      DUF810  331 rLldYHesFekgniesmenv..lslallaakilaedvsseerkakee.eaassesdsaservetYi 393 
                   Ll+ He+++k++ e +e+   ++l l  ++ l++ vs e++++ ++  + s+++ + s  +++Y+
  EPX73332.1 1117 ELLKIHEYYDKSTDELLEECekITLHLFHSSRLVN-VSPENNAEMSKlAKLSNKEIYRSGTIKQYV 1181
                  789999***99999999976335556666666666.444443333332444555558888888887 PP

>> RNA_pol_Rpb4  RNA polymerase Rpb4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1       1.1     5e+03      37      73 ..      78     134 ..      53     145 .. 0.65
   2 ?    4.8   0.2    0.0074        33      44      87 ..     767     810 ..     751     814 .. 0.90
   3 ?    7.4   0.1    0.0012       5.4      44      98 ..    1086    1162 ..    1060    1175 .. 0.72

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 1.1
                   HTCHHCHHHHHHHHHHHC....................THHTTSSHHHHHHHHHHHT CS
  RNA_pol_Rpb4  37 vkgnlnkilkktleyltn....................kfsrlkneekfnelvellk 73 
                    k+++ k  k+ ++ylt                     +f+++++ ++ + +++++k
    EPX73332.1  78 EKRGSLKYPKEFIKYLTIelenismgrnpkyqdqllrgTFAAFYTTISKSYIMKQMK 134
                   455667777788888887777777777776666666667777777777666666666 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.0074
                   HHHHHHHHHHCTHHTTSSHHHHHHHHHHHTTSTSTHHHHHHHHH CS
  RNA_pol_Rpb4  44 ilkktleyltnkfsrlkneekfnelvellksfeLtkaEklqlvn 87 
                   il ++++y ++++ +l+++++ +elv+ l ++e tk +kl+  n
    EPX73332.1 767 ILLNNVHYAIQAYEELESKINLQELVQALDQAESTKVQKLSTTN 810
                   566899999999*********************99999997655 PP

  == domain 3  score: 7.4 bits;  conditional E-value: 0.0012
                    HHHHHHHHHHC.......................THHTTSSHHHHHHHHHHHTTSTSTHHHHHHHHHCSTSSHHHHHH CS
  RNA_pol_Rpb4   44 ilkktleyltn.......................kfsrlkneekfnelvellksfeLtkaEklqlvnlkPesavelkt 98  
                    i +  l++l++                       k ++++  ++  el+e+++++ L+ +    lvn  Pe+ +e + 
    EPX73332.1 1086 IVYSWLQFLKDylhangegvnlsvletehyqellKIHEYY-DKSTDELLEECEKITLHLFHSSRLVNVSPENNAEMSK 1162
                    5555555555555555555544444333333332234444.45599**************************999765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1243 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       766  (0.0427241); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.80u 0.31s 00:00:01.11 Elapsed: 00:00:00.47
# Mc/sec: 8030.24
//
Query:       EPX73333.1  [L=239]
Description: chromosome segregation protein Pcs1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-15   58.0   0.5    2.2e-15   57.0   0.2    1.7  2  Csm1      Chromosome segregation protein Csm1/Pcs1
    0.00096   19.3  17.0      0.019   15.1  17.0    2.1  1  DUF5094   Domain of unknown function (DUF5094)
  ------ inclusion threshold ------
       0.66   10.2   3.6       0.36   11.1   0.8    2.1  2  VPS11_C   Vacuolar protein sorting protein 11 C terminal
          2    8.4  12.6       0.17   11.8   6.8    2.1  3  YscO      Type III secretion protein YscO
        2.9    8.4  11.0       0.25   11.8   5.7    1.9  2  CENP-H    Centromere protein H (CENP-H)


Domain annotation for each model (and alignments):
>> Csm1  Chromosome segregation protein Csm1/Pcs1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       2.9     1e+04      19      29 ..     102     112 ..      89     136 .. 0.62
   2 !   57.0   0.2   6.3e-19   2.2e-15       6      83 ..     150     223 ..     146     224 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 2.9
        Csm1  19 kedesedvfdc 29 
                 +e++s++++ +
  EPX73333.1 102 SETQSKELYGT 112
                 34444444433 PP

  == domain 2  score: 57.0 bits;  conditional E-value: 6.3e-19
        Csm1   6 lyedLtGlivrsvkedesedvfdciqtgrngtlhfkLaiskefeeaeisYvPlldesrdkellelLPdYLveeitFpr 83 
                 l+++L Gl v s k  e++  ++c  tgr+g+l+++L +++    ++++++P l ++rd+el++ LP+YL+eei F++
  EPX73333.1 150 LVKELFGLEVLSSKVVEEGIRYTCRNTGRRGQLEYQLLLDD----SNFTFTPCLHPQRDAELMDYLPEYLTEEIIFTK 223
                 7899***********************************98....89*****************************86 PP

>> DUF5094  Domain of unknown function (DUF5094)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1  17.0   5.4e-06     0.019      42     175 ..      87     237 ..       1     239 [] 0.68

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 5.4e-06
     DUF5094  42 kkeekvtstkenkenekqdkdsllkeikdienelieaykeeNeyLrsl...........knevlltskllGltike.tgdtfivkykvekkeiekslkF 128
                 ++++    tke+ +  + ++++l+  i +++ el e+ k++N  Lr++            +e+ll ++l Gl++   +  +  + y+  +++ + +l++
  EPX73333.1  87 QEQSFRMATKEIVHTSETQSKELYGTIAELKREL-ESEKKNNDQLRQElaeskhyvqevDEEKLLVKELFGLEVLSsKVVEEGIRYTCRNTGRRGQLEY 184
                 2222233344444444444444444555555553.4445555555555555555555559*************988344566799999999999***** PP

     DUF5094 129 eLkeedenYiYk..liesknvd....lpeyLseeisFekeqlkkFfykvmqiv 175
                 +L  +d+n++++  l  ++  +    lpeyL+eei F keq k F  ++m+++
  EPX73333.1 185 QLLLDDSNFTFTpcLHPQRDAElmdyLPEYLTEEIIFTKEQGKLFSARIMKAL 237
                 ***********9545555554433347******************99999876 PP

>> VPS11_C  Vacuolar protein sorting protein 11 C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.1       1.4   4.9e+03       2      17 ..       7      22 ..       6      24 .. 0.76
   2 ?   11.1   0.8    0.0001      0.36       2      29 ..     111     138 ..     110     139 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 1.4
     VPS11_C  2 etirelrraQeesadr 17
                +t+r+++++ ++s ++
  EPX73333.1  7 KTSRKTFKQRRDSPEK 22
                7999999999887655 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.0001
     VPS11_C   2 etirelrraQeesadrhdlFkaaLeese 29 
                  ti el+r+ e  ++++d++ ++L es+
  EPX73333.1 111 GTIAELKRELESEKKNNDQLRQELAESK 138
                 5899*********************985 PP

>> YscO  Type III secretion protein YscO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1       1.8   6.5e+03      35      38 ..      15      18 ..       3      39 .. 0.46
   2 ?   -0.9   0.1       0.4   1.4e+03     106     126 ..      69      89 ..      64      97 .. 0.68
   3 ?   11.8   6.8   4.8e-05      0.17      79     127 ..     103     151 ..      73     154 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 1.8
                HHHH CS
        YscO 35 qare 38
                q+r 
  EPX73333.1 15 QRRD 18
                2222 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.4
                 HHHHHHHHHHHHHHHHHHHHH CS
        YscO 106 arkelqearraveKfaelarl 126
                  r e+ e ++ ++K+++l+++
  EPX73333.1  69 RRHEYNELSKLLSKINALQEQ 89 
                 566677777777777777665 PP

  == domain 3  score: 11.8 bits;  conditional E-value: 4.8e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        YscO  79 rekeaelekqveeakqqleaerealrqarkelqearraveKfaelarlv 127
                 + +++el+  ++e+k++le e ++ +q+r+el+e ++ v++++e++ lv
  EPX73333.1 103 ETQSKELYGTIAELKRELESEKKNNDQLRQELAESKHYVQEVDEEKLLV 151
                 67899************************************99998766 PP

>> CENP-H  Centromere protein H (CENP-H)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.2       1.1   3.9e+03      10      38 ..       7      35 ..       3      43 .. 0.55
   2 ?   11.8   5.7     7e-05      0.25       8      98 ..      69     164 ..      64     165 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 1.1
      CENP-H 10 elssellklsqelrelqeeltevekenlr 38
                ++s +  k+ +++ e++e+  ++++++l+
  EPX73333.1  7 KTSRKTFKQRRDSPEKEESHLDIKENILS 35
                44555555555555555555555555544 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 7e-05
      CENP-H   8 rdelssellklsqelrelqeeltevekenlrl..krknrelaaellelakekesek...eklkeelekleaelkksrqrwrvvknvasaiivgSgV 98 
                 r +   el kl +++++lqe+  ++  + +    +++++el  +++el++e esek   ++l++el++ +  +++  ++  +vk+ +   +++S+V
  EPX73333.1  69 RRHEYNELSKLLSKINALQEQSFRMATKEIVHtsETQSKELYGTIAELKRELESEKknnDQLRQELAESKHYVQEVDEEKLLVKELFGLEVLSSKV 164
                 555667888899999999988766655555431256889******999999999998888899999999999999999999999999999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1862  (0.103854); expected 358.6 (0.02)
Passed bias filter:                      665  (0.0370907); expected 358.6 (0.02)
Passed Vit filter:                        79  (0.00440627); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 1561.17
//
Query:       EPX73334.1  [L=148]
Description: ubiquitin conjugating enzyme Ubc13 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.7e-47  158.9   0.0    6.5e-47  158.7   0.0    1.0  1  UQ_con     Ubiquitin-conjugating enzyme
     0.0024   17.6   0.0     0.0031   17.2   0.0    1.2  1  Prok-E2_B  Prokaryotic E2 family B
     0.0061   16.4   0.1      0.011   15.6   0.1    1.4  1  UEV        UEV domain
  ------ inclusion threshold ------
      0.012   15.9   0.3      0.026   14.8   0.3    1.7  1  RWD        RWD domain


Domain annotation for each model (and alignments):
>> UQ_con  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.7   0.0   1.5e-50   6.5e-47       1     137 [.       6     140 ..       6     143 .. 0.95

  Alignments for each domain:
  == domain 1  score: 158.7 bits;  conditional E-value: 1.5e-50
                 HHHHHHHHHHHSTTTTEEEEEEETTEECEEEEEEEB.TTSTTTTEEEEEEEE--TTTTTS--EEEESST-SCTTBETTSBB-CGGGSTTT--TTSHHHH CS
      UQ_con   1 rlqkelkelakkkpsgisaklvddenlfewkvlikgpedtpYeggvFklelefpedYPlkpPkvkfvtkifHPnvdksGevcldiLkeekWspaltles 99 
                 r+ ke+++l++++p+gi+a++++d nl  ++++i+gp+++ Yegg F+lel +pe+YP+ pP+v+f tki+HPnvdk G++cl+ Lk++ Wspal++++
  EPX73334.1   6 RIIKEIDTLTRDPPPGIEASPMED-NLRYFQITIEGPHQSAYEGGKFHLELFLPEEYPMMPPSVRFLTKIYHPNVDKLGRICLSTLKKD-WSPALQIRT 102
                 789********************8.**************************************************************55.********* PP

                 HHHHHHHHHHS--TTS-SSHHHHHHHHHTHHHHHHHHH CS
      UQ_con 100 vllsiqsLlaepnpesplnkeaakllkkdreeykkkvk 137
                 vllsiq+L+  pnp++pl++++ak +k+++++   +++
  EPX73334.1 103 VLLSIQALMGAPNPDDPLDNDVAKIWKDNEQQAILNAR 140
                 *****************************887665555 PP

>> Prok-E2_B  Prokaryotic E2 family B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0     7e-07    0.0031      34     113 ..      47     120 ..      25     137 .. 0.76

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 7e-07
   Prok-E2_B  34 sggtvdlrlvypdsfpllppavflqdpeqlkllpHintfg.gaLClleeeldldewdpngsvadvleqlqqvLn.egisgde 113
                 +gg + l+l +p+++p +pp+v+          +H n ++ g +Cl    +    w p+  ++ vl ++q+++   ++ +  
  EPX73334.1  47 EGGKFHLELFLPEEYPMMPPSVRFLTKI-----YHPNVDKlGRICL---STLKKDWSPALQIRTVLLSIQALMGaPNPDDPL 120
                 79********************875443.....78888668*****...577777899999999998888887655665555 PP

>> UEV  UEV domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.1   2.4e-06     0.011      35     120 ..      38     119 ..      26     120 .. 0.72

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 2.4e-06
                 EEEEEE-SSSTTS-EEEEEEE--TTTTTS--EEEE-GCC--TSGGGGGB-TTSBB--HHHH.S--T..TT--HHHHHHHHHH-----XX CS
         UEV  35 lkGtipvkykgatyniPiliwvlesyPveaPivyvkptksmvikknenvdaqGlvylpyLe.eWkr..eksnlvslvqelaqafeeesP 120
                 ++G  +  y+g   ++ ++++++e+yP+ +P v    +       + nvd+ G++ l  L+ +W++  +  +++  +q l+ a + + P
  EPX73334.1  38 IEGPHQSAYEG--GKFHLELFLPEEYPMMPPSVRFLTKI-----YHPNVDKLGRICLSTLKkDWSPalQIRTVLLSIQALMGAPNPDDP 119
                 55555555554..4567899***********98654433.....3559************73588865555577777888777777766 PP

>> RWD  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.3   5.8e-06     0.026      32      79 ..      36      93 ..      13     147 .. 0.65

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 5.8e-06
                EEEEEEECECCCC....TT-CEEEEEEEEE-SSTTSS--EEEEEECC..................S CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..................x RF
         RWD 32 ikikldededeedsefeekkkpslkleiklpeeYPeeaPiislsste..................n 79
                i+i++ +++          +  +++le  lpeeYP  +P +++ ++                   +
  EPX73334.1 36 ITIEGPHQSA--------YEGGKFHLELFLPEEYPMMPPSVRFLTKIyhpnvdklgriclstlkkD 93
                4444444433........45789************9999999988876665654444444433330 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       265  (0.0147805); expected 358.6 (0.02)
Passed bias filter:                      247  (0.0137766); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.42
# Mc/sec: 1056.78
//
Query:       EPX73335.1  [L=1269]
Description: ubiquitin-protein ligase E3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-14   53.6  10.8    2.5e-14   52.6  10.8    1.5  1  Zn_ribbon_17  Zinc-ribbon, C4HC2 type
    3.4e-05   24.5  17.5       0.45   11.5   0.0    5.7  5  WD40          WD domain, G-beta repeat
  ------ inclusion threshold ------
       0.08   12.9   0.2       0.14   12.1   0.2    1.3  1  NAD4L         NADH dehydrogenase subunit 4L (NAD4L)
       0.14   12.2   0.7         17    5.5   0.0    2.4  2  efb-c         Extracellular fibrinogen binding protein C term
       0.55   10.6  13.1       0.08   13.3   8.0    2.2  2  zf-RING_2     Ring finger domain
        1.7    9.0  10.0       0.12   12.7   4.7    1.8  2  zf-rbx1       RING-H2 zinc finger domain
        2.1    8.5   6.3        5.1    7.2   6.3    1.6  1  zf-ANAPC11    Anaphase-promoting complex subunit 11 RING-H2 f


Domain annotation for each model (and alignments):
>> Zn_ribbon_17  Zinc-ribbon, C4HC2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.6  10.8   9.9e-18   2.5e-14       5      55 ..    1213    1265 ..    1209    1267 .. 0.94

  Alignments for each domain:
  == domain 1  score: 52.6 bits;  conditional E-value: 9.9e-18
  Zn_ribbon_17    5 ksCayCelavkgrvvlcgvCeHvlHasCarewfendd..laeCpsGCGckcle 55  
                    + C++C+l+++g+  +c  C H +H++C  ewf+++d  ++ Cps CGc+c++
    EPX73335.1 1213 ERCSFCNLSIRGLSKVCSLCLHAIHEECFYEWFSTQDmlTQYCPSSCGCHCQY 1265
                    68***********************************99999*********86 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.2       3.9     1e+04      22      38 .]     231     246 ..     221     246 .. 0.79
   2 !   10.4   0.6   0.00037      0.95       7      38 .]     259     292 ..     255     292 .. 0.83
   3 ?    4.9   0.8     0.021        54       9      38 .]     306     335 ..     299     335 .. 0.82
   4 !   11.5   0.0   0.00018      0.45       5      38 .]     344     381 ..     341     381 .. 0.64
   5 !    5.9   0.1    0.0098        25       2      37 ..     436     482 ..     435     482 .. 0.63

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 3.9
                 SSEEEEEETTSEEEEEE CS
        WD40  22 gawlasGsdDgtvriWd 38 
                  +w+++ s +++  +W+
  EPX73335.1 231 DQWVVTTS-NQKTIVWN 246
                 47999999.77777786 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00037
                 EESS.SSEEEEEEETTSSE.......EEEEETTSEEEEEE CS
        WD40   7 ltGH.ssvtslafspdgaw.......lasGsdDgtvriWd 38 
                 l GH   vt++      +w       la++s D +v+ Wd
  EPX73335.1 259 LHGHtRAVTDM------NWhrqypdiLATSSIDSSVHCWD 292
                 679*555****......7777777778999*********9 PP

  == domain 3  score: 4.9 bits;  conditional E-value: 0.021
                 SSSSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   9 GHssvtslafspdgawlasGsdDgtvriWd 38 
                  H++ t ++++  ++ ++++s  + v+iWd
  EPX73335.1 306 WHNGATQVKWNYRNPHVLASSHGRFVHIWD 335
                 6877899999999999887777*******9 PP

  == domain 4  score: 11.5 bits;  conditional E-value: 0.00018
                 EEEESSSS...EEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40   5 rtltGHss...vtslafspdgaw.lasGsdDgtvriWd 38 
                 +t+ +  s   +++l f++ +   l+++ +D+tv++Wd
  EPX73335.1 344 HTIQTSASitkINGLEFNKVSETrLLTCAMDRTVKFWD 381
                 555444232346677555555557778988*******9 PP

  == domain 5  score: 5.9 bits;  conditional E-value: 0.0098
                 EEEEEEESSSS.EEEEE........EETTSSE..EEEE.ETTSEEEEE CS
        WD40   2 qclrtltGHss.vtsla........fspdgaw..lasG.sdDgtvriW 37 
                 ++++t++GH++ v  +         f++d++   l+   s+D+ vr+W
  EPX73335.1 436 RPVHTFSGHTDlVKEFLwrcrgedvFDKDNRDfqLI-TwSKDRYVRLW 482
                 589******667544422333666644444445656.55889999999 PP

>> NAD4L  NADH dehydrogenase subunit 4L (NAD4L)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.2   5.6e-05      0.14      17      44 ..    1002    1030 ..     997    1038 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 5.6e-05
       NAD4L   17 ll.sltrllNlLiilEnfNvllLlvcllv 44  
                  +l +++++lN+ i  Enf +l +l+c+l 
  EPX73335.1 1002 FLkTVQSFLNYYITQENFQMLAMLSCVLD 1030
                  4426789*******************996 PP

>> efb-c  Extracellular fibrinogen binding protein C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.1     0.015        37       5      31 ..     910     936 ..     906     953 .. 0.81
   2 ?    5.5   0.0    0.0068        17      29      54 ..    1189    1214 ..    1185    1218 .. 0.91

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.015
       efb-c   5 kkkekklvdAqklvreFkktrtvaaHR 31 
                 +  +k  v+  +lv++F+   tv + +
  EPX73335.1 910 IGTNKTSVETRHLVKFFDMSETVPTKK 936
                 6679999****************9864 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.0068
       efb-c   29 aHRkAqkAvnLvsFeykvkkkkLqer 54  
                  + R+ q Av L+    k +k kL er
  EPX73335.1 1189 TARQQQAAVALIRMRRKERKDKLDER 1214
                  77999******************998 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.2       1.2     3e+03      14      31 ..     772     788 ..     765     796 .. 0.64
   2 ?   13.3   8.0   3.1e-05      0.08       2      42 ..    1214    1257 ..    1213    1260 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 1.2
   zf-RING_2  14 dsvlllpCgHvfhreCle 31 
                   ++++ C  +f+ + l 
  EPX73335.1 772 IPLPKT-CAAIFCNDTLV 788
                 445555.*999*998664 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 3.1e-05
   zf-RING_2    2 eCpICleelssadsvlllpCgHvfhreClerwlrssst....CPl 42  
                   C+ C  ++   ++v+ l C H +h+eC+ +w+ ++      CP 
  EPX73335.1 1214 RCSFCNLSIRGLSKVCSL-CLHAIHEECFYEWFSTQDMltqyCPS 1257
                  6****889999999**99.**************999889999995 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.4   0.2         7   1.8e+04       2      15 ..     703     716 ..     702     720 .. 0.64
   2 ?   12.7   4.7   4.6e-05      0.12       8      52 ..    1209    1256 ..    1207    1259 .. 0.90

  Alignments for each domain:
  == domain 1  score: -4.4 bits;  conditional E-value: 7
     zf-rbx1   2 tCaiCrneleeaci 15 
                 +C+  ++++++ c+
  EPX73335.1 703 HCITSKKPCMDGCL 716
                 46666666666665 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 4.6e-05
     zf-rbx1    8 neleeacieckapgdeecpvvlGeCgHaFHlhCiskWlkt....rkvCP 52  
                   +l+e c  c+ + +   ++v++ C Ha H +C  +W++t     + CP
  EPX73335.1 1209 DKLDERCSFCNLSIRG-LSKVCSLCLHAIHEECFYEWFSTqdmlTQYCP 1256
                  578999999*999999.9**********************888878899 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   6.3     0.002       5.1      32      76 ..    1212    1257 ..    1207    1265 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.002
                  TS--TTCSTTTTTS-EEEBTTS-EEEHHHHHHHHHHHST.SSB-TT CS
  zf-ANAPC11   32 dGtcpsckfpGddcplvlGkckhnfhlhcilkwletets.kglcpm 76  
                  d  c  c++     + v   c h++h+ c ++w++t+    + cp 
  EPX73335.1 1212 DERCSFCNLSIRGLSKVCSLCLHAIHEECFYEWFSTQDMlTQYCPS 1257
                  6678888888888899999***************987642788995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1269 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       721  (0.0402142); expected 358.6 (0.02)
Passed bias filter:                      396  (0.0220871); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.80u 0.32s 00:00:01.12 Elapsed: 00:00:00.48
# Mc/sec: 7918.85
//
Query:       EPX73336.1  [L=392]
Description: MADS-box transcription factor Map1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-18   66.5   0.1      3e-18   65.0   0.1    1.8  2  SRF-TF    SRF-type transcription factor (DNA-binding and dime


Domain annotation for each model (and alignments):
>> SRF-TF  SRF-type transcription factor (DNA-binding and dimerisation domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.0   0.1   1.7e-22     3e-18       2      48 .]      26      72 ..      25      72 .. 0.98
   2 ?   -2.8   0.0      0.27   4.8e+03      12      21 ..     223     232 ..     222     233 .. 0.88

  Alignments for each domain:
  == domain 1  score: 65.0 bits;  conditional E-value: 1.7e-22
      SRF-TF  2 IeneraRqvtFsKRrnGLfKKAsELsvLcgvevavvvfspngklytf 48
                I+++ +Rq++F+KR++GLfKKA+EL +L+g+ev+v+v+s++g ++tf
  EPX73336.1 26 IQDPFKRQTSFKKRKAGLFKKANELFMLTGSEVMVIVVSETGLVHTF 72
                99999*****************************************9 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.27
      SRF-TF  12 FsKRrnGLfK 21 
                 Fs+  +GLf+
  EPX73336.1 223 FSNQLSGLFQ 232
                 99999***96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (392 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1020  (0.0568911); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 2548.79
//
Query:       EPX73337.1  [L=227]
Description: V-type ATPase V1 subunit E [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.2e-63  212.4  15.7    5.1e-63  212.1  15.7    1.1  1  vATP-synt_E  ATP synthase (E/31 kDa) subunit
  ------ inclusion threshold ------
        1.3    8.9   6.8       0.78    9.7   2.9    2.0  2  TF_AP-2      Transcription factor AP-2
        2.3    8.8  13.1       0.88   10.1   1.1    2.4  2  APG6_N       Apg6 coiled-coil region


Domain annotation for each model (and alignments):
>> vATP-synt_E  ATP synthase (E/31 kDa) subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  212.1  15.7   8.5e-67   5.1e-63       1     199 []      18     217 ..      18     217 .. 0.99

  Alignments for each domain:
  == domain 1  score: 212.1 bits;  conditional E-value: 8.5e-67
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHCCCCH CS
  vATP-synt_E   1 fIrqeAeekAeeIkakaeeefeiekaklveeeeekieeayekkeKqaelqkkiaiSnalnkarlkvLkareevleevfeeaekkLaeveedkdeYkel 98 
                  fI+qeA ekA+eI++ +ee+f+ ekak+v+ee+e+i++ ye k K++++++kia+Sn++nk+rl +L+ r+ev++ +f+++ekkL+ +e++kd+Y ++
   EPX73337.1  18 FIKQEALEKAKEIHTLSEEDFQVEKAKIVREECEAIDRSYEGKLKRVSMAQKIAKSNVMNKSRLDLLNNRQEVIDGIFSKVEKKLESIEQKKDAYVKF 115
                  8************************************************************************************************* PP

                  HHHHHCCCCCCC-SSCEEEEECCCCHHCCCCTHCCCCCCHHCCSSSS--SEEEEESSEB.TTSSSEEEECCSSSCEEECCCHHHCHHHHHHHHHHCCC CS
  vATP-synt_E  99 lkkLivqalvkleepevivrarkeDaelveealdkaaeeykaktkkktvevagdeedfl.edvlGGvvleaadgkikvnnTlearLelvleqllpeir 195
                  l++Livq ++ l e+  i++ar++D++lv+ a++ka+e +k++ k k++e  +d++++l +++lGGv++++ +gkik++nT+ arLel+++++lp+ir
   EPX73337.1 116 LTDLIVQSIELLSEQVGIIYARQRDVDLVSLAMTKAMETLKEQEKFKNIEIDIDHDEYLdDSCLGGVIVVGLEGKIKIDNTIKARLELIKKEALPQIR 213
                  ***********************************************************556************************************ PP

                  CCHC CS
  vATP-synt_E 196 kaLF 199
                  + LF
   EPX73337.1 214 HLLF 217
                  ***9 PP

>> TF_AP-2  Transcription factor AP-2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   2.9   0.00013      0.78      72     139 ..       8      73 ..       2     105 .. 0.68
   2 ?    0.7   0.1     0.073   4.3e+02      69     125 ..     106     160 ..      95     171 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00013
     TF_AP-2  72 kaanvtlltslvEgEavhlakDleklceeefpakaiaeelvkeale.denlelekrkekleaakqilke 139
                  +a++ +++s++ +Ea++ ak++++l ee+f++++ a+ + +e+++ d+  + e  ++ +++a++i k+
  EPX73337.1   8 VQAEMRKMISFIKQEALEKAKEIHTLSEEDFQVEK-AKIVREECEAiDR--SYEGKLKRVSMAQKIAKS 73 
                 567899*************************9986.3333333333333..355556666666666654 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.073
     TF_AP-2  69 grrkaanvtlltslvEgEavhlakDleklceeefpakaiaeelvkeale.denlelek 125
                 +++k a+v+ lt l+ +    l ++++ ++ ++ +++ ++ +++k +++ +e    ek
  EPX73337.1 106 EQKKDAYVKFLTDLIVQSIELLSEQVGIIYARQRDVDLVSLAMTKAMETlKE---QEK 160
                 4788889999999999999999999999999999999999888888885333...333 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   5.1     0.017     1e+02      21     107 ..       8      66 ..       2      90 .. 0.60
   2 ?   10.1   1.1   0.00015      0.88      11      75 ..      95     160 ..      88     168 .. 0.68

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.017
      APG6_N  21 aekerdaYeeflkklkkekkeeekqdeeleeleeeleklekeeeelleeLkelekereeleaelaaleeelealeeeeerfwreyne 107
                 ++                           +e ++ ++ +++e  e+ +e+  l +e+ ++e++ +  +ee+ea+++  e ++++ + 
  EPX73337.1   8 VQ---------------------------AEMRKMISFIKQEALEKAKEIHTLSEEDFQVEKA-KIVREECEAIDRSYEGKLKRVSM 66 
                 33...........................3444446667777777777777777777777664.44566666666666655555444 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00015
      APG6_N  11 leeldkqleqaekerdaYeeflkklkkekkeeek.qdeeleeleeeleklekeeeelleeLkelek 75 
                  ++++k+le+ e+++daY +fl  l  ++ e  + q   + + +++++ ++ +  +++e Lke ek
  EPX73337.1  95 FSKVEKKLESIEQKKDAYVKFLTDLIVQSIELLSeQVGIIYARQRDVDLVSLAMTKAMETLKEQEK 160
                 57899*******************998855543243334444444455555555555555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1417  (0.079034); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1622.94
//
Query:       EPX73338.1  [L=522]
Description: Smc5-6 complex non-SMC subunit Nse6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.9e-10   38.2  17.9    3.8e-09   35.7  17.9    1.9  1  Nse5      DNA repair proteins Nse5 and Nse6
  ------ inclusion threshold ------
        2.1    9.0   6.0        2.5    8.8   4.1    2.1  2  Fz        Fz domain


Domain annotation for each model (and alignments):
>> Nse5  DNA repair proteins Nse5 and Nse6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.7  17.9   4.3e-13   3.8e-09      26     499 ..      24     471 ..       7     479 .. 0.78

  Alignments for each domain:
  == domain 1  score: 35.7 bits;  conditional E-value: 4.3e-13
        Nse5  26 tekhlsdfEklnslcllesydsllfslearlr.rdlnssslvvppddiLivlitldtvsshpkksvirendpYnvtrsvkslekrslklldkyld.iLn 122
                  ++++++f++l++   l+  +   + +  +l+  + ++s+++++ +d+L++++t d++  +++k +++++ +Y+  +            l++ +d  +n
  EPX73338.1  24 LDSDSDEFDALPEIT-LPKGETENRPRHLYLKnDTTDFSTYKWS-IDRLSSTATQDDMNRKRRKFAVEKLLYYDKEQ------------LENEEDgGIN 108
                 566666777777443.333333334445666666779*******.********************************............5665553599 PP

        Nse5 123 efdaekygryalellrcqfflaidtiekelqsskkfrrrrpsslldvslkpsdvddn.edwsllsfenpyssyislldkktsvlsnfllnrklsqkgef 220
                 ++ +e +g++ l+llr + +  ++t+e++++  + ++ +++  + ++s+ +   ++  ++ + + +    s +i      +s+ s +l++r+l+    +
  EPX73338.1 109 TLLNENVGSDVLNLLRTNST-KSETLEYHFYNPSIAEPEVNPISSKLSIEDECTQKLlNCPDYIFEIAACSNLI-----PPSIVSSVLIKRFLNSF--N 199
                 999***************99.66777777776666666666666666666654444315555555555555555.....789***********943..3 PP

        Nse5 221 cn...eilwtLsnsldkfgasqekdnllleiseiwmpvldllldileldlmkrqdyyiqsetenkassalslke........plltflkfildrklfkd 308
                 ++    +l +L+  +      ++ +  + e++ + +  ++ +++ ++ +  kr+ ++  + t+  +  +  l e         l++ l++i+++ l++ 
  EPX73338.1 200 YPsrfTWLQNLRAYI------NSGPQCKDEFCLSVNFFYTHICRKIGFNIQKRNQPVRSELTSSEEVCSVVLNEssevdffvELCRVLYPICPQELQSL 292
                 332235888999999......66666666667777889*******************99999999988888887999********************** PP

        Nse5 309 fcedlfvncldkldsrdvrldiipvYlsivelnisnlhyrlvklspdykskkSmslRrkllsvcfklLsklfkg...irlrrpkialdqfiikefrtll 404
                 +  d+++ +ld+ +  + r+ +i+   siv       +y lv+ls+             ++sv++ +Ls+l+++   ++++r+ +a  +f++++ +   
  EPX73338.1 293 MIRDVCRCLLDIKVGHACRTSFIKFMESIVTSEKPHFFYDLVRLSD-------------QPSVWISILSSLPSNsptNIRFRTNLAIHWFLGSLPER-- 376
                 *********************************************8.............699********998722245666777777777766666.. PP

        Nse5 405 dfkdikqllaffllaedallellkndeervry....alllalgnkldpffeevlellkd.rilDlsidgstekillsiekadiclivllryvyyehgna 498
                  +  + +++  +    d ll  +kn   + +     ++ + + ++  + +e++  +l++ r+l l i g+te+ lls++++++ +++l + +yyeh++ 
  EPX73338.1 377 -SRIFPSICGQL----DRLLDRCKNENYTDLLflmiTFSYTVSELRLKKSENLDLVLEKlRKLNLAIPGTTEHLLLSRCEVKDYIHRLYMVIYYEHSDV 470
                 .44455888888....6666666665554444488655555555545558899999999***************************9999******986 PP

        Nse5 499 l 499
                 +
  EPX73338.1 471 Y 471
                 5 PP

>> Fz  Fz domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.3     0.018   1.6e+02       5      92 ..     173     267 ..     167     276 .. 0.62
   2 ?    8.8   4.1   0.00028       2.5       7      90 ..     234     314 ..     220     329 .. 0.66

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.018
                 E...ETT-.S...-SEE-GGGS.S-SSHHHHHHHHHHHHGGGG-..HHHTTSTTHHHHHHS---E.ESSS-EEEE---HHHHHHHHTT-GGGSTT CS
          Fz   5 elelCkai.g...ynstslpnllgheteeevaeeleefsllvkl..eCspalklflCsllfpkCe.psgeeeaplppCrslCeavrdsCekvlae 92 
                 e+ +C+++ +    +s  ++ +l++ +  +  + l+++++ +++  +C+ ++ l +  +++  C+   ++ +++++p rs   + ++ C+ vl+e
  EPX73338.1 173 EIAACSNLiPpsiVSSVLIKRFLNSFNYPSRFTWLQNLRAYINSgpQCKDEFCLSVNFFYTHICRkIGFNIQKRNQPVRSELTSSEEVCSVVLNE 267
                 66667775444532333333333333333223446677666777899999999999999999**8423344556688888888888888777644 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00028
                 ..ETT-S-SEE-GGGS.S-SSHHHHHHHHHHH.HGGGG-HHHTTSTTHHHHHHS---EESSS-EEEE---HHHHHH.HHTT-GGGS CS
          Fz   7 elCkaigynstslpnllgheteeevaeeleef.sllvkleCspalklflCsllfpkCepsgeeeaplppCrslCea.vrdsCekvl 90 
                 ++C++ig+n  + ++ +++e      +  ee+ s++++ + + ++   lC +l+p C ++ ++   + +Cr l +  v ++C+ ++
  EPX73338.1 234 HICRKIGFNIQKRNQPVRSELT----S-SEEVcSVVLNESSEVDFFVELCRVLYPICPQELQSLMIRDVCRCLLDIkVGHACRTSF 314
                 6899888886653333322222....2.333335555555555666669********88888888889999776666667777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (522 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       769  (0.0428914); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.26s 00:00:00.87 Elapsed: 00:00:00.45
# Mc/sec: 3471.45
//
Query:       EPX73339.1  [L=310]
Description: protein-tyrosine phosphatase Pyp3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.9e-59  200.1   0.2    4.7e-59  199.8   0.2    1.1  1  Y_phosphatase    Protein-tyrosine phosphatase
    2.9e-06   27.5   0.0    5.4e-06   26.6   0.0    1.4  1  PTPlike_phytase  Inositol hexakisphosphate
    0.00053   20.0   0.0    0.00081   19.4   0.0    1.3  1  Y_phosphatase3   Tyrosine phosphatase family
    0.00068   19.5   0.3     0.0013   18.5   0.2    1.7  1  DSPc             Dual specificity phosphatase, catalytic doma
     0.0023   16.9   0.0     0.0037   16.3   0.0    1.3  1  Myotub-related   Myotubularin-like phosphatase domain


Domain annotation for each model (and alignments):
>> Y_phosphatase  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  199.8   0.2   1.3e-62   4.7e-59       3     233 ..      46     283 ..      44     285 .. 0.89

  Alignments for each domain:
  == domain 1  score: 199.8 bits;  conditional E-value: 1.3e-62
                    GGSSSTTS-B-CTTEEEBTTT.TTTTTEEEEEEEEECTEEEEEEEEE---GGGHHHHHHHHHHT..T--EEEEESBSEETTEESS---S-SSTSSE CS
  Y_phosphatase   3 eknRykdilpydksrVklkss.egpsdYInAnyikgykkekkyIatQgPlkstvedFWrmvwqe..kvkvivmLtsleekgrekcaqYwpeeeees 95 
                    ++nRy++i py ++ V+l+++   ++dY+nA+++     ++++IatQgP++st+ +FW+mvwq+  +  +ivmLt+l+e  r kc+ Ywp++ ee+
     EPX73339.1  46 RRNRYSNIFPYKDNYVRLSPEwGYDCDYMNASHV-ILPCRQSFIATQGPTSSTIPHFWKMVWQSvhDHGIIVMLTRLQEGLRAKCDLYWPSDPEEP 140
                    79****************443144566*******.555699**********************87689**************************** PP

                    EEETTEEEEEE..EEEEEESSEEEEEEEEEETTTTEEEEEEEEEEESSS-SSSSG..SCCHHHHHHHHHHHHHHSTTSS-EEEECSSSSHHHHHHH CS
  Y_phosphatase  96 leygkikvtlk.ekekedekeyvlrelevkkkkeeseerevkqlqytnWpdhgvp..esaksllklirkvekskeaksgpvvVhCsaGvgRtgtfv 188
                    l+++++ v++  + e e  +++ + e+ ++k +e++   +++++ yt+W+d  +p  +s  sll +++++ ++ + +++p+++hCsaG+gRtgtf+
     EPX73339.1 141 LQIDELLVRCNqKYEVESVDDCKVLEFVLEKGQEKK---TIYHFYYTEWSDFRTPkaSSICSLLLFVKSLAHRVRFHKSPIIIHCSAGCGRTGTFM 233
                    ***********8777778889*********888886...9***************65567788899999999999********************* PP

                    HHHHHHHHHHH...HSE..EEHHHHHHHHHTTSTTSS-SHHHHHHHHHHH CS
  Y_phosphatase 189 aldillqqlea...eee..vdvlqivkelrkqRpgmvqtleqyiflyevi 233
                    al  ++ ++e    +++   ++ +iv  lr qR+++vq++eq+ifly ++
     EPX73339.1 234 ALFEIITRIEFrfaSDQllESIPEIVYCLRMQRMQSVQSAEQLIFLYIMC 283
                    *********98554333788999***********************9766 PP

>> PTPlike_phytase  Inositol hexakisphosphate
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.0   1.5e-09   5.4e-06      83     155 ..     159     239 ..     134     240 .. 0.83

  Alignments for each domain:
  == domain 1  score: 26.6 bits;  conditional E-value: 1.5e-09
                      ........EE-HHHHHHHTT-EEEEEEE-TTS---HHHHHHHHHHHHTS-T.....T-EEEEE-SSSSHHHHHHHHHHHHH CS
  PTPlike_phytase  83 ve...tpeevyerelaeelslrYaRipitdekapeeedfdalvsilkeape.....ktalvfnCqmGrgRTTtamviatLl 155
                      v+   + e v e+ +++++ ++++    +d ++p+++ + +l+ ++k+++      k++++++C++G gRT t+m+++ ++
       EPX73339.1 159 VDdckVLEFVLEKGQEKKTIYHFYYTEWSDFRTPKASSICSLLLFVKSLAHrvrfhKSPIIIHCSAGCGRTGTFMALFEII 239
                      2244467778899999999999999999*********************556************************99876 PP

>> Y_phosphatase3  Tyrosine phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   2.3e-07   0.00081      86     141 ..     173     236 ..     117     242 .. 0.58

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 2.3e-07
  Y_phosphatase3  86 keeeeaeetlaelYrelle......sakkayrkvfealadee......pvlfHCtaGKDRTGvlaall 141
                     +e+++ +++   +Y e+ +      s+  ++  +++ la+ +      p+++HC+aG  RTG ++al+
      EPX73339.1 173 QEKKTIYHF---YYTEWSDfrtpkaSSICSLLLFVKSLAH-RvrfhksPIIIHCSAGCGRTGTFMALF 236
                     333333333...3444444333433222222233333443.1346668*****************996 PP

>> DSPc  Dual specificity phosphatase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.2   3.7e-07    0.0013      50      94 ..     192     236 ..     146     281 .. 0.80

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 3.7e-07
                 STTSCCGGGHHHHHHHHHHHHHTT-EEEEEESSSSSHHHHHHHHH CS
        DSPc  50 ehetkiskyleeavefidkakqkgkkvlVHCqaGisRSatliiaY 94 
                  + + i++ l  +++  + ++  +  +++HC aG  R++t+++ +
  EPX73339.1 192 PKASSICSLLLFVKSLAHRVRFHKSPIIIHCSAGCGRTGTFMALF 236
                 45667778888888888999999******************9877 PP

>> Myotub-related  Myotubularin-like phosphatase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0     1e-06    0.0037     213     260 ..     196     243 ..     160     247 .. 0.88

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 1e-06
                     HHHHHHHHHHHHHHHHHCS---EEEE-SSSSSHHHHHHHHHHHHH-GG CS
  Myotub-related 213 hiksiLeaaaliaksvelekssvLvhcsdGwDrtsqlsslaqllLdpy 260
                      i s+L  ++ +a+ v+ +ks++++hcs G  rt   ++l +++    
      EPX73339.1 196 SICSLLLFVKSLAHRVRFHKSPIIIHCSAGCGRTGTFMALFEIITRIE 243
                     677788889999*****************************9986655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       509  (0.0283898); expected 358.6 (0.02)
Passed bias filter:                      407  (0.0227007); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.45
# Mc/sec: 2082.40
//
Query:       EPX73340.1  [L=160]
Description: VanZ-like family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.4e-05   24.1   9.6    8.5e-05   23.2   9.6    1.6  1  VanZ      VanZ like family
  ------ inclusion threshold ------
      0.013   16.3   0.0      0.021   15.6   0.0    1.3  1  DUF2279   Predicted periplasmic lipoprotein (DUF2279)
      0.034   13.8   5.3      0.022   14.4   4.0    1.4  1  TauE      Sulfite exporter TauE/SafE
        0.3   10.9   5.8       0.37   10.6   5.8    1.1  1  CbiM      Cobalt uptake substrate-specific transmembrane regi


Domain annotation for each model (and alignments):
>> VanZ  VanZ like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   9.6   1.9e-08   8.5e-05      57     121 ..      41     113 ..       2     118 .. 0.73

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 1.9e-08
        VanZ  57 gnvalfvplGfllplllkkkflk...........vlllgfllslsiElhQlfvpgRsfdvdDvilntlGallGill 121
                  ++ +fv +  ll l++ +   +            +++g++  ++ E++Q f+  R+fdv D++ n +G+ l +++
  EPX73340.1  41 DKLCHFVVFF-LLSLVFYWV--FdlsrrratqltLVVCGLVGCIGSEFVQAFLTLRVFDVFDIFANLVGCGLSLMI 113
                 5899999974.444444222..123335678884444455556679************************998876 PP

>> DUF2279  Predicted periplasmic lipoprotein (DUF2279)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.6   0.0   4.7e-06     0.021      15      90 ..      41     114 ..      39     115 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 4.7e-06
     DUF2279  15 DklgHlyssYllaellsalierkgleksnaalaasllslalmlymElgDsfkessGFsyeDvianlsGaalallly 90 
                 Dkl H+   +ll+ ++  +++ +    + + l+  +  l   + +E+  +f +   F + D+ anl+G++l+l+++
  EPX73340.1  41 DKLCHFVVFFLLSLVFYWVFDLSRR--RATQLTLVVCGLVGCIGSEFVQAFLTLRVFDVFDIFANLVGCGLSLMIN 114
                 9999999999999888777765543..334444444444445678***************************9976 PP

>> TauE  Sulfite exporter TauE/SafE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   4.0     5e-06     0.022      56     139 ..       7      82 ..       1      94 [. 0.65

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 5e-06
        TauE  56 rrrgnvdwrlllllllgsliGallGallllllpse.llkllfgvlllllallmllrkkrsrakgrerrptaillvligglvGlls 139
                 ++  +++ r+l ++++  +i+++lG+  +l +p +  l  +++++ll l+++ ++  +r+ra    ++ t+++     glvG ++
  EPX73340.1   7 LQ-FAIRKRVLAVFIVLLIIATYLGFAPVLPIPVNdKLCHFVVFFLLSLVFYWVFDLSRRRA----TQLTLVVC----GLVGCIG 82 
                 44.46999********************9988866445555555555566666665542222....23344433....4455544 PP

>> CbiM  Cobalt uptake substrate-specific transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   5.8   8.3e-05      0.37      83     161 ..      15      96 ..       7     118 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 8.3e-05
        CbiM  83 flavavvlllqallfgdGGitaLGaN....ilnmavigvllaylvyrllsrlasskkrvalaaflaallsvvlaallvalela 161
                 +lav++vll+ a+ +g+  ++ + +N     +++ ++ +l++y+v+ l  r+  ++ ++++ ++++++ s ++ a+l++ +++
  EPX73340.1  15 VLAVFIVLLIIATYLGFAPVLPIPVNdklcHFVVFFLLSLVFYWVFDLS-RRRATQLTLVVCGLVGCIGSEFVQAFLTLRVFD 96 
                 79************************66655888888889999999955.444557888888888888888888888776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1027  (0.0572815); expected 358.6 (0.02)
Passed bias filter:                      551  (0.0307323); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.42u 0.28s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1166.63
//
Query:       EPX73341.1  [L=895]
Description: guanyl-nucleotide exchange factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-27   96.6   2.0    3.4e-27   95.3   1.2    2.0  2  Sec7      Sec7 domain
    1.2e-09   38.5   0.0    5.9e-09   36.3   0.0    2.2  1  PH_9      Pleckstrin homology domain


Domain annotation for each model (and alignments):
>> Sec7  Sec7 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.3   1.2   3.8e-31   3.4e-27      31     157 ..     288     418 ..     252     433 .. 0.86
   2 ?   -1.6   0.0       0.2   1.8e+03     169     182 ..     496     509 ..     481     510 .. 0.84

  Alignments for each domain:
  == domain 1  score: 95.3 bits;  conditional E-value: 3.8e-31
                 SSHHHHHHHHHHT..CCS-HHHHHHHHCSGGHHHHHHHHHHHCTS--TT--HHHHHHHHCCCS-B-SSHHHHHHHHHHHHHHHHHTTCTCG.-SHHHHH CS
        Sec7  31 edpksiakflket..pgldkkklGeylgkekefnkevlkefvdlfdfsglrldeAlRlflssfrlpgEaqkierilekFaekyfeqnpevf.enadavf 126
                  dpk +a+ ++++  + ++ +   + l+ke+++nkevl+++v+lfdf ++++ ++lR+++ ++ ++gE qk++ +le+F+++++++np++   ++d v+
  EPX73341.1 288 YDPKVVAMDIFNNtgKLVSNEDALSLLTKEDDYNKEVLENYVSLFDFGNTDILQSLRILCGNLFIKGETQKVDHLLEAFSSRWCHTNPRMTfCTKDIVH 386
                 3477777777666556668888889999***********************************************************98754999**** PP

                 HHHHHHHHHHHHHC-TTS.CCS--HHHHHHCT CS
        Sec7 127 vLaysiimLntdlhnpqv.kkkmtledFiknn 157
                  +a+s+++Lntdlh  ++  +kmt ++F++n+
  EPX73341.1 387 SVAFSLLLLNTDLHIANIaSQKMTRSQFVSNT 418
                 *****************999*********996 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.2
                 HHHHHHHHHHHHS- CS
        Sec7 169 efLeeiYdsIkeee 182
                  +L+e+Y+sIk+  
  EPX73341.1 496 SVLKEMYQSIKASS 509
                 689*******9876 PP

>> PH_9  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.3   0.0   6.5e-13   5.9e-09      20     119 .]     651     754 ..     636     754 .. 0.88

  Alignments for each domain:
  == domain 1  score: 36.3 bits;  conditional E-value: 6.5e-13
        PH_9  20 plkkrgWkevyavlkklvLylykdeeesesaetedlkslknakllgkirlhhaLaek....asdYkk.kshvFrLqtadgaeylfqtsdakevqeWvdt 113
                  +kk+ W + + +l k++L ly  e+++  ++++d++ +k ++++ k+++  + a+      + + +     F L+t +g+ + f ++   e+q W+++
  EPX73341.1 651 LRKKELWMTTLSILEKDILSLYSVEGNF-DGDLHDIDGSKIGNPILKTSVMGSAAHLmnleKTSFRRpSTSFFYLETHSGKRLQFSVPRLGEAQAWIEA 748
                 369*********************7765.688999***************998887765557779999999**************************** PP

        PH_9 114 iNyvAA 119
                 +Ny+AA
  EPX73341.1 749 LNYWAA 754
                 *****9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (895 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       864  (0.0481901); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.30s 00:00:00.94 Elapsed: 00:00:00.42
# Mc/sec: 6329.73
//
Query:       EPX73342.1  [L=158]
Description: eukaryotic protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-24   86.5   0.0    2.4e-24   85.8   0.0    1.2  1  2Fe-2S_thioredx  Thioredoxin-like [2Fe-2S] ferredoxin


Domain annotation for each model (and alignments):
>> 2Fe-2S_thioredx  Thioredoxin-like [2Fe-2S] ferredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.8   0.0   1.3e-28   2.4e-24       2     143 ..      16     155 ..      15     156 .. 0.92

  Alignments for each domain:
  == domain 1  score: 85.8 bits;  conditional E-value: 1.3e-28
                      HHHHTTS-..-GGGGHHHHHHHHHHHHS.S--HHHHHHHHHHHTS-HHHHHHHHTTS.SSS-SS---SEEEEEE-SHHHHTTTHHHHHHHHHHH CS
  2Fe-2S_thioredx   2 keiiakyp..ekrsaliplLklvQeeeg.wlpeealeevaellgvppaevyevatFY.smfnlkpvgkyviqvCtttpCalrgseeilealekk 91 
                      k+++++yp  ++r++l+plL+l+Q+++g w+p++a++e+ ++++++  +v++++  Y + f+++p+   ++++C++++C+ + +++    +e  
       EPX73342.1  16 KRLVSRYPpgQERASLVPLLDLAQRQHGtWIPPSAMQEIGNTTNLSFEQVFAIVLAYpTSFQWRPCAP-QLRICDSWMCCQKAKQRDNGIFEAA 108
                      78899****99***************877****************************899*****998.9**********99888766666655 PP

                      HT--TT-B-TTSSEEEEEES--S-GGGSSEEEESSSSEEES-HHHHHHHHHH CS
  2Fe-2S_thioredx  92 lgikagettadgkftleeveClGaCanaPvvqindevyedltpekveeilek 143
                           ++++++  +++++++ClGaC  aP+ + nd++++d t+e+++ei++k
       EPX73342.1 109 -----QSIASQYGVEVKTTSCLGACYGAPAFWFNDKIHTDATKETIKEIISK 155
                      .....46778999************************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       557  (0.031067); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.37
# Mc/sec: 1284.89
//
Query:       EPX73343.1  [L=500]
Description: cell wall protein Gas5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     9e-141  468.7   4.8   1.2e-140  468.2   4.8    1.1  1  Glyco_hydro_72  Glucanosyltransferase
    1.8e-05   24.3   0.4    0.00017   21.1   0.4    2.2  1  Cellulase       Cellulase (glycosyl hydrolase family 5)


Domain annotation for each model (and alignments):
>> Glyco_hydro_72  Glucanosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  468.2   4.8  1.3e-144  1.2e-140       6     313 ..      21     333 ..      17     335 .. 0.98

  Alignments for each domain:
  == domain 1  score: 468.2 bits;  conditional E-value: 1.3e-144
                     STTS--EEEETTEEEETTT-BBE-EEEEE--BE------SSB-GGG-HHHHHHHHHHHHHHT-SEEEES---TTS--HHHHHHHHHTT-EEEEES CS
  Glyco_hydro_72   6 eeaveaieikgnkffdsksgeqfyikGvdyqpggseevsslvdpladaeaCkrdikllkelgvntvrvyavdnskdhdeCmkalsdagiyvildl 100
                     +++++ +ei+gn+ff+s+++e+fyi+Gvdyqpggs   ss++dpla +e+Ckrdi++lk+l++nt+rvy++dn ++hdeCmk l+dagiyv+ldl
      EPX73343.1  21 SASTPHLEIRGNAFFNSETNERFYIRGVDYQPGGS---SSTTDPLAVVENCKRDIPYLKDLNINTIRVYQIDNIANHDECMKELEDAGIYVLLDL 112
                     678999*****************************...899****************************************************** PP

                     -BTTBS--TTS-..---HHHHHHHHHHHHHHTT-TTEEEEEEEESSS-STT-GGGHHHHHHHHHHHHHHHHHSSS----EEEEE---TTTHHHHH CS
  Glyco_hydro_72 101 nepkesinradpassynedllervfkvidafkeyknvlgffaGnevvndksntaasayvkavvrdvkeyikkkkerkiPvGysaaddaelrvela 195
                     +++k+si+r d+a+syn+ +l+ +f+ +dafk+y+nvlgffaGnev+n+ +n+a++++vka++rd+k+y+k++++r+iPvGysaad+ae+r+++a
      EPX73343.1 113 ATSKNSISRLDAAASYNAIYLQGIFASVDAFKDYDNVLGFFAGNEVANEPKNAATTTWVKAALRDTKKYLKNNSKRQIPVGYSAADVAEIRLQCA 207
                     *********************************************************************************************** PP

                     HHTTBTT-...--S-EEEEE----SS.--HHHHSHHHHHHHHTT-SS-EEEEEE---SSS.......S---THHHHHTSHHHHTTEEEEEES-SB CS
  Glyco_hydro_72 196 eylaCgdedd.kadffglnmyeWCgk.ssfktsGydertkefenysiPlflseyGCnkvt.......prkftevealyseemtsvfsGGlvyeys 281
                     +++aCgd+++ +adf+g+nmyeWCg+ ssf+tsGyd+r+kef+nysiPlflseyGCn+v+       +r+f+ev+a++s++m+svfsGGlvyeys
      EPX73343.1 208 DFFACGDDAEaRADFYGMNMYEWCGSgSSFTTSGYDQRMKEFANYSIPLFLSEYGCNTVSkesdgtpDRPFDEVDAIFSDKMSSVFSGGLVYEYS 302
                     *******9977*************9889*******************************999****99*************************** PP

                     --SSS--SEEE-TTS-EEE-THHHHHHHHHHH CS
  Glyco_hydro_72 282 eeannyGlvkiddddvkkllkdfenlkseykk 313
                     ee +nyGlv+i++d+vk ++k++++lk++y +
      EPX73343.1 303 EEGSNYGLVTINGDSVK-TSKNYDTLKQKYGN 333
                     ***************99.9**********976 PP

>> Cellulase  Cellulase (glycosyl hydrolase family 5)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.4   1.9e-08   0.00017      59     172 ..      89     194 ..      61     290 .. 0.61

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 1.9e-08
                 HHHHHHHHHHHHHHHTT-EEEEEEESSTTTCSSSSTTTTHHHHHHHHHHHHHHHHHHHTTTTTTEEE....ESSSS--STTCTCCTCHHHTTHHHHHHH CS
   Cellulase  59 nslerveevvkyakenglyvildiHseegwltkadgnssedtaeeffkklwtqiAerykkndevvif....elmNEPhgnntgaewtseeadevkayae 153
                 +++++ +e +k  +++g+yv+ld+   ++   + ++ +  ++ ++ + + + +  + +k++d+v++f    e++NEP    t ++w         ++a 
  EPX73343.1  89 DNIANHDECMKELEDAGIYVLLDLATSKN---SISRLDAAASYNAIYLQGIFASVDAFKDYDNVLGFfagnEVANEPKNAAT-TTW--------VKAAL 175
                 67788999****************99622...23333334444444444455559***********9666666777766444.466........55555 PP

                 HHHHHHHHHTTSSEEEEEC CS
   Cellulase 154 eaikaIRavgpnrliiveg 172
                 + +k  ++ +++r i v+ 
  EPX73343.1 176 RDTKKYLKNNSKRQIPVGY 194
                 5555555566666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (500 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       806  (0.0449551); expected 358.6 (0.02)
Passed bias filter:                      470  (0.0262145); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.38
# Mc/sec: 3953.62
//
Query:       EPX73344.1  [L=399]
Description: heterotrimeric G protein beta subunit Gnr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.1e-08   32.7   3.1      0.032   15.1   0.1    5.0  6  WD40             WD domain, G-beta repeat
    0.00019   20.8   0.0       0.23   10.7   0.0    2.3  2  Lactonase        Lactonase, 7-bladed beta-propeller
    0.00035   20.8   0.0        2.5    8.4   0.0    3.7  4  ANAPC4_WD40      Anaphase-promoting complex subunit 4 WD40 do
  ------ inclusion threshold ------
      0.066   13.3   0.1          5    7.2   0.0    3.2  4  BBS2_Mid         Ciliary BBSome complex subunit 2, middle reg
       0.13   12.5   0.0       0.26   11.5   0.0    1.4  1  DNA_Packaging_2  DNA packaging protein


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       3.8   1.4e+04      15      25 ..      52      62 ..      45      66 .. 0.79
   2 ?   -1.9   0.0       2.1   7.4e+03      12      22 ..     103     113 ..      95     115 .. 0.74
   3 !    5.5   0.0    0.0098        35      14      32 ..     159     177 ..     147     182 .. 0.84
   4 ?    0.1   0.0      0.51   1.8e+03       8      38 .]     197     238 ..     191     238 .. 0.66
   5 !   15.1   0.1   8.8e-06     0.032       9      38 .]     254     283 ..     243     283 .. 0.79
   6 !    7.5   0.0    0.0023       8.3      23      37 ..     314     327 ..     289     328 .. 0.68

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 3.8
                EEEEETTSSEE CS
        WD40 15 slafspdgawl 25
                ++++sp g+ +
  EPX73344.1 52 AQKWSPGGRSV 62
                57899999876 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 2.1
                 SEEEEEEETTS CS
        WD40  12 svtslafspdg 22 
                 +v+s+a++p +
  EPX73344.1 103 CVYSFAWHPFQ 113
                 38999999865 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.0098
                 EEEEEETTSSEEEEEETTS CS
        WD40  14 tslafspdgawlasGsdDg 32 
                 +++ f  dg +l++G+ D+
  EPX73344.1 159 HCMVFTTDGEYLVAGGTDN 177
                 6999***********9775 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 0.51
                 ESS.SS........E.EEEEEETTSSEEEE.EETTSEEEEEE CS
        WD40   8 tGH.ss........v.tslafspdgawlas.GsdDgtvriWd 38 
                  GH +s        v +s++ +p ++ +++ G+ ++tv i+d
  EPX73344.1 197 NGHgFStleptlegVqSSICLNPQNPRMLAlGTFNNTVGIYD 238
                 588544677777777778887777777554376688887776 PP

  == domain 5  score: 15.1 bits;  conditional E-value: 8.8e-06
                 SSSSEEEEEEETTSSEEEEEE.TTSEEEEEE CS
        WD40   9 GHssvtslafspdgawlasGs.dDgtvriWd 38 
                 G  +vt++++spdg  l  Gs +  ++ +Wd
  EPX73344.1 254 GT-GVTHMKWSPDGCKLYVGSrKSTSIEVWD 283
                 44.7****************956*******9 PP

  == domain 6  score: 7.5 bits;  conditional E-value: 0.0023
                 SEEEEEETTSEEEEE CS
        WD40  23 awlasGsdDgtvriW 37 
                   l+sG+ Dg v iW
  EPX73344.1 314 G-LISGGTDGYVSIW 327
                 3.568999******* PP

>> Lactonase  Lactonase, 7-bladed beta-propeller
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.0   6.5e-05      0.23     138     188 ..     151     196 ..     125     201 .. 0.78
   2 !    7.8   0.0   0.00048       1.7     184     227 ..     248     291 ..     233     303 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 6.5e-05
                 TT-SSTTEEEEEE-TTSSEEEEEETTTTEEEEEEE.-TTS-EEEEEEEE-S CS
   Lactonase 138 erqesphaHsvvldpdgkfllvpDLGtDrvrvykldkatgkltepasvklp 188
                 +r++    H++v++ dg++l++   GtD+v+++++ +++++   p s +++
  EPX73344.1 151 HREKFTGSHCMVFTTDGEYLVA--GGTDNVYLFNVRQGQKS---PVSKTTT 196
                 46677788************99..6**********888854...3333444 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.00048
                 EEE-STT--EEEEEE-TTSSEEEEEETTTTEEEEEEEE-TTTEE CS
   Lactonase 184 svklppgsGPRHlaFhpdgkiaYvvnELsstvsvfsydeatgal 227
                 +++l+ g+G  H+ ++pdg  +Yv +  s +++v++   a+ +l
  EPX73344.1 248 KFSLATGTGVTHMKWSPDGCKLYVGSRKSTSIEVWDTRYAQDML 291
                 56789999999999999999999999999999999766445444 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.2   0.0    0.0034        12       7      71 ..     120     187 ..     117     205 .. 0.81
   2 !    5.8   0.0    0.0048        17      49      90 ..     221     263 ..     201     263 .. 0.81
   3 !    8.4   0.0   0.00071       2.5      36      66 ..     252     283 ..     224     307 .. 0.76
   4 ?   -1.7   0.0       1.1   3.8e+03      22      81 ..     284     341 ..     277     350 .. 0.57

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0034
  ANAPC4_WD40   7 mDLiAlatedgellvfRl.ngqrvwtl...eedkedsevrsLaWkpdgklLavaysdgevrlldaesgk 71 
                   DL+ + t+d  ++++ l + qr+ ++   ++ ++    +++ +  dg+ L+ +  d+ v l+++ +g+
   EPX73344.1 120 SDLFVYSTKDYPIQLYSLaKQQRISSFyivDHREKFTGSHCMVFTTDGEYLVAGGTDN-VYLFNVRQGQ 187
                  699************99966788988877766666666679**********9998886.7788888776 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0048
  ANAPC4_WD40  49 dgklLavaysdgevrlldaesgk.vvhslsvksekavtclgWg 90 
                  + ++La ++ +++v ++d +  + +  ++s ++ + vt ++W+
   EPX73344.1 221 NPRMLALGTFNNTVGIYDNYGSRpCQLKFSLATGTGVTHMKWS 263
                  5699**************9977614558888888889999995 PP

  == domain 3  score: 8.4 bits;  conditional E-value: 0.00071
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdg.evrlld 66 
                  +++  v++++W+pdg  L v+  ++ ++++ d
   EPX73344.1 252 ATGTGVTHMKWSPDGCKLYVGSRKStSIEVWD 283
                  678899*********99999987653666666 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 1.1
  ANAPC4_WD40  22 fRlngqrvwtleedkedsevrsLaWkpdg.klLavaysdgevrlldaesgkvvhslsvkse 81 
                   R    +++++ +d+ + + + +++   g + L  +  dg v++ +    ++v++++v+++
   EPX73344.1 284 TRYAQDMLYEI-KDHGGDTNQRISFDTFGyEGLISGGTDGYVSIWQG--NELVEKVNVTDQ 341
                  55555556666.34444444555555555345777777777777653..355666655555 PP

>> BBS2_Mid  Ciliary BBSome complex subunit 2, middle region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.74   2.6e+03       9      28 ..     117     136 ..     112     146 .. 0.70
   2 ?   -2.3   0.0       1.3   4.5e+03       8      22 ..     164     177 ..     160     197 .. 0.72
   3 ?    1.5   0.0     0.082   2.9e+02      43      67 ..     215     239 ..     202     263 .. 0.86
   4 ?    7.2   0.0    0.0014         5       6      48 ..     306     349 ..     304     358 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.74
    BBS2_Mid   9 gdgeneLvvgsddfeirvfk 28 
                 +++++  v +++d+ i++++
  EPX73344.1 117 EQDSDLFVYSTKDYPIQLYS 136
                 44445566688899998886 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 1.3
    BBS2_Mid   8 dgdgeneLvvgsddf 22 
                 ++d  ++Lv+g +d+
  EPX73344.1 164 TTD-GEYLVAGGTDN 177
                 444.35899999986 PP

  == domain 3  score: 1.5 bits;  conditional E-value: 0.082
    BBS2_Mid  43 vslarlekerfayaleNGtvgvyek 67 
                 ++l   +++ +a +  N tvg+y++
  EPX73344.1 215 ICLNPQNPRMLALGTFNNTVGIYDN 239
                 5666777888999999*******96 PP

  == domain 4  score: 7.2 bits;  conditional E-value: 0.0014
    BBS2_Mid   6 dvdgdgeneLvvgsddfeirvfkeeelvaeitetekv.vslarl 48 
                  +d+ g + L+ g +d  + +++++elv +++ t++  +++a++
  EPX73344.1 306 SFDTFGYEGLISGGTDGYVSIWQGNELVEKVNVTDQRnITVAAI 349
                 57888999**********************99887641445555 PP

>> DNA_Packaging_2  DNA packaging protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   7.1e-05      0.26       6      33 ..     277     304 ..     274     307 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 7.1e-05
  DNA_Packaging_2   6 tflemlDtataqrmladLsdherrsnql 33 
                      t +e+ Dt  aq ml ++ dh+ ++nq 
       EPX73344.1 277 TSIEVWDTRYAQDMLYEIKDHGGDTNQR 304
                      789***********************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (399 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       448  (0.0249875); expected 358.6 (0.02)
Passed bias filter:                      378  (0.0210832); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.71u 0.36s 00:00:01.06 Elapsed: 00:00:00.60
# Mc/sec: 1998.00
//
Query:       EPX73345.1  [L=207]
Description: ribosome biogenesis protein Nop16 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.6e-47  161.1  10.3      4e-47  161.0  10.3    1.0  1  Nop16     Ribosome biogenesis protein Nop16


Domain annotation for each model (and alignments):
>> Nop16  Ribosome biogenesis protein Nop16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  161.0  10.3   2.2e-51     4e-47       2     209 ..       6     205 ..       5     206 .. 0.89

  Alignments for each domain:
  == domain 1  score: 161.0 bits;  conditional E-value: 2.2e-51
       Nop16   2 qrrkarssvkkakkrkksklkkkvnilgnpiiaenWdkkkTlkqNYkrLGLvaklnapaGgvekklskanekeekekkklee..eesdekklskgeari 98 
                 qr+k+rs +++ ++++++k k k +i gn+i++enWd + Tl+qNY+r+GLv + n  +Gg+ek +++++ +e+++k++ ++   e+ +++l +g+a +
  EPX73345.1   6 QRKKQRSNQPRLTRKNHNK-KAKAKIYGNSIVRENWDMHATLTQNYERMGLVVTPNYVTGGKEKINPDRKPEENENKAEPTQeeLEEIRRNLGPGQAIV 103
                 9******************.9999****************************************99988877776655444445788899********* PP

       Nop16  99 eRDeeGkivkviegk.kkkeneledpleeleedeekeeeeekkkktevvkeLekeaare.kakkerhlsereeewlerLvekhG.dDyeaMarDrkLNp 194
                  RD+eG+i+++i+gk ++ ++ l++++++             ++ktev ++Le+ea r+ k +k+ +ls+ e  +++rL++k+G +D+e+Ma+D+kLNp
  EPX73345.1 104 RRDDEGNIIEIIHGKeRTFDDVLDEDVKS------------VPAKTEVTRKLEEEALRKdKPRKKLPLSAFELSYMTRLLKKYGtEDFESMAKDMKLNP 190
                 **************444444444444444............4678***********7776999999********************************* PP

       Nop16 195 mqqtegdlkrrikkw 209
                    ++++lk++ +++
  EPX73345.1 191 KLISSAKLKQMYSRM 205
                 ***********9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1078  (0.0601261); expected 358.6 (0.02)
Passed bias filter:                      499  (0.027832); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.34s 00:00:00.96 Elapsed: 00:00:00.56
# Mc/sec: 1114.75
//
Query:       EPX73346.1  [L=644]
Description: 1,3-beta-glucan synthase regulatory factor Chf3/Chr4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-18   67.3  17.7    5.6e-05   23.7   0.1    7.2  7  Sel1      Sel1 repeat
    1.9e-08   33.8   0.7    4.3e-05   23.3   0.0    3.0  2  TPR_2     Tetratricopeptide repeat
    3.4e-08   33.0   1.0    7.8e-05   22.3   0.0    2.8  2  TPR_1     Tetratricopeptide repeat
      3e-07   30.1   0.7    0.00025   21.0   0.0    2.8  2  TPR_8     Tetratricopeptide repeat
    6.2e-05   22.7   1.4    0.00091   19.1   0.1    2.8  2  TPR_7     Tetratricopeptide repeat
    0.00077   19.7   6.3      0.025   14.9   0.2    3.3  4  TPR_12    Tetratricopeptide repeat
     0.0014   18.5   0.7      0.021   14.7   0.1    2.8  2  TPR_10    Tetratricopeptide repeat
     0.0014   19.2   0.4       0.16   12.7   0.0    3.6  3  TPR_6     Tetratricopeptide repeat
      0.002   18.7   4.6      0.019   15.6   0.2    3.1  2  TPR_16    Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.033   15.0   0.4       0.21   12.5   0.0    2.6  2  TPR_14    Tetratricopeptide repeat
      0.045   14.1   4.4        5.7    7.5   0.0    3.7  3  TPR_17    Tetratricopeptide repeat
       0.21   11.8   6.9          1    9.6   0.6    3.1  3  ANAPC3    Anaphase-promoting complex, cyclosome, subunit 3
        1.8    8.7   4.7         15    5.8   0.1    3.2  3  MIT       MIT (microtubule interacting and transport) domain


Domain annotation for each model (and alignments):
>> Sel1  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.6   4.4e-05     0.061       2      37 ..     284     318 ..     283     319 .. 0.92
   2 ?    5.6   0.0      0.02        28       4      35 ..     323     348 ..     320     348 .. 0.67
   3 ?    5.1   0.1     0.029        40       1      36 [.     352     390 ..     352     392 .. 0.81
   4 ?   -2.6   0.0       7.4     1e+04      15      34 ..     419     438 ..     418     438 .. 0.80
   5 !   12.4   0.2   0.00015       0.2       1      37 [.     443     478 ..     443     479 .. 0.92
   6 !   23.7   0.1   4.1e-08   5.6e-05       2      38 .]     481     516 ..     480     516 .. 0.93
   7 !   13.6   0.1     6e-05     0.082       3      38 .]     519     548 ..     517     548 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 4.4e-05
        Sel1   2 eAmyrLGmfylylnGl.gvpkDpekAiewyekAAeqG 37 
                  A+y  +  y y+ G  +v+ D ++A e+y  +A++G
  EPX73346.1 284 RALYYDA--YTYESGAfDVEVDLQQAWELYSASAKHG 318
                 799999*..999****66******************9 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.02
        Sel1   4 myrLGmfylylnGl.gvpk.DpekAiewyekAAe 35 
                 +yrLG           +++ + ++A+e++e  A+
  EPX73346.1 323 LYRLG--------ViLEDQgNLQEAVEYFEEGAS 348
                 44444........22244459*********9885 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.029
        Sel1   1 aeAmyrLGmfylylnGl....gvpk.DpekAiewyekAAeq 36 
                 +++++rL+  +l l+G     g+ +  + +++e++e++A++
  EPX73346.1 352 SASCWRLA--LLILEGMldniGTYAqQRGRGLELLEQSANN 390
                 689*****..888****9777633358999********987 PP

  == domain 4  score: -2.6 bits;  conditional E-value: 7.4
        Sel1  15 nGlgvpkDpekAiewyekAA 34 
                 +Gl vp +++ A+e + +AA
  EPX73346.1 419 EGLQVPVNERIALESFARAA 438
                 68889999999998777776 PP

  == domain 5  score: 12.4 bits;  conditional E-value: 0.00015
        Sel1   1 aeAmyrLGmfylylnGlg.vpkDpekAiewyekAAeqG 37 
                 +++m r+G +y  ++G+    k p+  i +y  A +qG
  EPX73346.1 443 SSSMLRMGAVY--EFGKYnCAKSPKYSILYYSAASKQG 478
                 689*****777..****66******************9 PP

  == domain 6  score: 23.7 bits;  conditional E-value: 4.1e-08
        Sel1   2 eAmyrLGmfylylnGl.gvpkDpekAiewyekAAeqGd 38 
                 eA ++L+   +ylnG  gvp D+++A+ + e+AA++G+
  EPX73346.1 481 EADFALA--KWYLNGGvGVPVDEDQAFVHAERAAMAGN 516
                 78899**..888****88******************97 PP

  == domain 7  score: 13.6 bits;  conditional E-value: 6e-05
        Sel1   3 AmyrLGmfylylnGlgvpkDpekAiewyekAAeqGd 38 
                 A++ LG  y   +    + + e+A++wy  A ++G+
  EPX73346.1 519 AQFLLG--Y--IFES--KNNSEQALYWYTEASNNGH 548
                 888888..6..3332..568999************8 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.0   3.1e-08   4.3e-05       3      31 ..     322     350 ..     320     353 .. 0.91
   2 !    7.9   0.1    0.0026       3.6       3      27 ..     519     543 ..     517     545 .. 0.94

  Alignments for each domain:
  == domain 1  score: 23.3 bits;  conditional E-value: 3.1e-08
       TPR_2   3 alynlGlayyklgdyeeAleafekAleld 31 
                  ly+lG +++ +g+++eA+e+fe+  +++
  EPX73346.1 322 SLYRLGVILEDQGNLQEAVEYFEEGASYN 350
                 69**********************88876 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0026
       TPR_2   3 alynlGlayyklgdyeeAleafekA 27 
                 a + lG++ + +++ e+Al ++ +A
  EPX73346.1 519 AQFLLGYIFESKNNSEQALYWYTEA 543
                 789********************98 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   5.7e-08   7.8e-05       2      26 ..     321     345 ..     320     351 .. 0.92
   2 !    8.3   0.2    0.0016       2.1       2      27 ..     518     543 ..     517     543 .. 0.92

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 5.7e-08
                 HHHHHHHHHHHHTT-HHHHHHHHHH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyek 26 
                 ++ly+lG+++  +g+++eA+ey+e+
  EPX73346.1 321 RSLYRLGVILEDQGNLQEAVEYFEE 345
                 579********************98 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.0016
                 HHHHHHHHHHHHTT-HHHHHHHHHHH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekA 27 
                 +a + lG+++ ++++ ++Al  y +A
  EPX73346.1 518 NAQFLLGYIFESKNNSEQALYWYTEA 543
                 57889******************998 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.0   1.8e-07   0.00025       2      31 ..     321     350 ..     320     352 .. 0.91
   2 !    6.7   0.2    0.0068       9.3       3      27 ..     519     543 ..     517     545 .. 0.87

  Alignments for each domain:
  == domain 1  score: 21.0 bits;  conditional E-value: 1.8e-07
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleld 31 
                 +++y+lg i++++g+++eA+ey+e+  +++
  EPX73346.1 321 RSLYRLGVILEDQGNLQEAVEYFEEGASYN 350
                 799*********************987765 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0068
                 HHHHHHHHHHHTT-HHHHHHHHHHH CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyeka 27 
                 a ++lg+i +++++ e+A  +y +a
  EPX73346.1 519 AQFLLGYIFESKNNSEQALYWYTEA 543
                 789***************8777776 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.1   6.6e-07   0.00091       1      27 [.     322     346 ..     322     359 .. 0.91
   2 ?    1.4   0.1       0.3   4.1e+02       4      24 ..     522     542 ..     521     555 .. 0.88

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 6.6e-07
       TPR_7   1 aLlnLarlysrlGdyeeAielyeqsLa 27 
                 +L++L+++ +++G+ +eA+e++e+  +
  EPX73346.1 322 SLYRLGVILEDQGNLQEAVEYFEE--G 346
                 799********************9..5 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.3
       TPR_7   4 nLarlysrlGdyeeAielyeq 24 
                  L+ ++++ ++ e+A+  y++
  EPX73346.1 522 LLGYIFESKNNSEQALYWYTE 542
                 699************988887 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.2   1.8e-05     0.025      28      70 ..     306     345 ..     303     348 .. 0.69
   2 ?   -2.0   0.0       3.4   4.7e+03       6      30 ..     367     388 ..     363     396 .. 0.69
   3 ?   -3.5   0.0       9.6   1.3e+04      45      61 ..     443     458 ..     440     459 .. 0.72
   4 !    6.5   0.2    0.0076        11      46      72 ..     518     544 ..     509     562 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.8e-05
      TPR_12  28 kaleiarrllGpdhpltattlrnLgrlyralgryeeAlellee 70 
                 +a e+++++   +h  t ++l+ Lg +++ +g+++eA+e++ee
  EPX73346.1 306 QAWELYSAS--AKHGFT-RSLYRLGVILEDQGNLQEAVEYFEE 345
                 555566555..556444.7888888888888888888888887 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 3.4
      TPR_12   6 lnnlaavlrrlgrydeAlellekal 30 
                 l n+++  +++gr    lelle++ 
  EPX73346.1 367 LDNIGTYAQQRGR---GLELLEQSA 388
                 4477777888888...666666665 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 9.6
      TPR_12  45 attlrnLgrlyralgry 61 
                 ++++  +g +y ++g+y
  EPX73346.1 443 SSSMLRMGAVY-EFGKY 458
                 67788888887.77776 PP

  == domain 4  score: 6.5 bits;  conditional E-value: 0.0076
      TPR_12  46 ttlrnLgrlyralgryeeAlelleeal 72 
                 ++++ Lg +++  ++ e+Al++++ea 
  EPX73346.1 518 NAQFLLGYIFESKNNSEQALYWYTEAS 544
                 678889999999999999999999985 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.1   1.5e-05     0.021       4      27 ..     322     345 ..     320     348 .. 0.92
   2 ?    0.7   0.1      0.37   5.1e+02       5      18 ..     367     380 ..     365     382 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.5e-05
      TPR_10   4 slnNLanalrqrgrydeAeallee 27 
                 sl  L+++l ++g+++eA++++ee
  EPX73346.1 322 SLYRLGVILEDQGNLQEAVEYFEE 345
                 7889*******************8 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.37
      TPR_10   5 lnNLanalrqrgry 18 
                 l N++ + +qrgr+
  EPX73346.1 367 LDNIGTYAQQRGRG 380
                 89**********96 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   0.0   0.00012      0.16       2      24 ..     322     344 ..     321     345 .. 0.94
   2 ?   -2.1   0.0       5.7   7.8e+03       2      19 ..     445     461 ..     444     463 .. 0.79
   3 ?    2.4   0.0      0.21   2.9e+02       2      20 ..     519     537 ..     518     561 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 0.00012
                 HHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   2 AlyklalsyrklgdtdkAleale 24 
                 +ly+l+  ++ +g+ ++A+e++e
  EPX73346.1 322 SLYRLGVILEDQGNLQEAVEYFE 344
                 69********************9 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 5.7
                 HHHHHHHHHHHHHHHHHH CS
       TPR_6   2 AlyklalsyrklgdtdkA 19 
                 ++++++  y+ + ++  A
  EPX73346.1 445 SMLRMGAVYEFG-KYNCA 461
                 699***999987.77666 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.21
                 HHHHHHHHHHHHHHHHHHH CS
       TPR_6   2 AlyklalsyrklgdtdkAl 20 
                 A+++l++ +++ +++++Al
  EPX73346.1 519 AQFLLGYIFESKNNSEQAL 537
                 899*******987999986 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.2   1.4e-05     0.019      14      59 ..     305     345 ..     303     353 .. 0.82
   2 ?    3.3   0.6     0.096   1.3e+02      34      60 ..     517     543 ..     508     553 .. 0.87

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 1.4e-05
      TPR_16  14 ddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyra 59 
                 ++A +++ a  k +       ++l+ lg+++  qg+l+eA++++++
  EPX73346.1 305 QQAWELYSASAKHG-----FTRSLYRLGVILEDQGNLQEAVEYFEE 345
                 66667777777777.....7899*********************98 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.096
      TPR_16  34 aeAllllgdaalrqgrlaeAaalyraa 60 
                   A++llg ++  +++ + A+ +y +a
  EPX73346.1 517 SNAQFLLGYIFESKNNSEQALYWYTEA 543
                 569*********************997 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   0.00015      0.21       3      39 ..     322     357 ..     320     362 .. 0.83
   2 ?   -1.4   0.1       4.3   5.9e+03       3      10 ..     519     526 ..     481     555 .. 0.63

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00015
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddaeawl 39 
                  l++l+ +l+ +G+++eA++++++  + + d+a  w+
  EPX73346.1 322 SLYRLGVILEDQGNLQEAVEYFEEGAS-YNDSASCWR 357
                 5899********************966.777776665 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 4.3
      TPR_14   3 allalaea 10 
                 a+ +l+ +
  EPX73346.1 519 AQFLLGYI 526
                 33444444 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.0    0.0042       5.7      14      34 .]     321     341 ..     312     341 .. 0.89
   2 ?   -1.6   0.1       3.6   4.9e+03       4      15 ..     382     393 ..     381     393 .. 0.86
   3 ?    6.2   0.2     0.012        16      12      33 ..     516     537 ..     514     538 .. 0.93

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0042
      TPR_17  14 daynnLAelllknGdlmtArq 34 
                  +++ L+++l+ +G+l++A++
  EPX73346.1 321 RSLYRLGVILEDQGNLQEAVE 341
                 589****************75 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 3.6
      TPR_17   4 kaleldPnnada 15 
                 + le+  nnada
  EPX73346.1 382 ELLEQSANNADA 393
                 789*******97 PP

  == domain 3  score: 6.2 bits;  conditional E-value: 0.012
      TPR_17  12 nadaynnLAelllknGdlmtAr 33 
                 n++a ++L++++++++++++A+
  EPX73346.1 516 NSNAQFLLGYIFESKNNSEQAL 537
                 99******************97 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.5     0.041        57      14      81 ..     273     345 ..     255     346 .. 0.66
   2 ?    2.5   0.0      0.13   1.8e+02      18      61 ..     315     358 ..     306     363 .. 0.66
   3 ?    9.6   0.6   0.00076         1       8      58 ..     504     551 ..     500     555 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.041
                 HHH..HHH--HHHHHHHHHHHHHTT-......HHHHHHHHHCTSHHHC-HHHHHHHHHHHHHTT-HHHHHHHH-S CS
      ANAPC3  14 rlla.aetespedayllAlclylngq......ykrAyellrkaklnskslgcrylfAqcllkLkkyeeAiaaLek 81 
                 +l + + +e+p ++y+ A+++ ++g        ++A el++ +  ++   +++y ++  l ++++++eA+  +e+
  EPX73346.1 273 KLREhSRAENPRALYYDAYTY-ESGAfdvevdLQQAWELYSAS-AKHGFTRSLYRLGVILEDQGNLQEAVEYFEE 345
                 333346677777777766654.444412222266777777777.5556669999999999999999999998875 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.13
                 HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCTSHHHC-HHHHHH CS
      ANAPC3  18 aetespedayllAlclylngqykrAyellrkaklnskslgcryl 61 
                 a++    ++y l+  l  +g+ ++A e++++  +++ s  c+ l
  EPX73346.1 315 AKHGFTRSLYRLGVILEDQGNLQEAVEYFEEGASYNDSASCWRL 358
                 44555566677777777777777777777777777777777655 PP

  == domain 3  score: 9.6 bits;  conditional E-value: 0.00076
                 HHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCTSHHHC-HHH CS
      ANAPC3   8 AiflaerllaaetespedayllAlclylngqykrAyellrkaklnskslgc 58 
                 A  +aer+   ++ ++++ +ll++ + + ++ ++A++++ +a +n+ + ++
  EPX73346.1 504 AFVHAERAA--MAGNSNAQFLLGYIFESKNNSEQALYWYTEA-SNNGHAEA 551
                 666788887..9999999999999999999999999999999.66676655 PP

>> MIT  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       2.1     3e+03      15      31 ..     299     315 ..     297     317 .. 0.81
   2 ?    5.8   0.1     0.011        15      12      33 ..     328     349 ..     322     354 .. 0.85
   3 ?    3.2   0.3     0.067        92      15      32 ..     528     545 ..     526     565 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 2.1
         MIT  15 DnagnyeeAlelYkeal 31 
                 D + + + A elY+ + 
  EPX73346.1 299 DVEVDLQQAWELYSASA 315
                 67778999*****9876 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.011
         MIT  12 veeDnagnyeeAlelYkealel 33 
                 v ++ +gn +eA+e+++e+  +
  EPX73346.1 328 VILEDQGNLQEAVEYFEEGASY 349
                 667899************9876 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.067
         MIT  15 DnagnyeeAlelYkeale 32 
                 ++++n e Al +Y+ea +
  EPX73346.1 528 ESKNNSEQALYWYTEASN 545
                 7899***********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (644 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       677  (0.0377601); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.72u 0.32s 00:00:01.04 Elapsed: 00:00:00.50
# Mc/sec: 3907.67
//
Query:       EPX73347.1  [L=268]
Description: U2 snRNP-associated protein Uap2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      4e-13   49.0   0.1      6e-05   22.8   0.0    3.4  2  RRM_1      RNA recognition motif. (a.k.a. RRM, RBD, or RNP do
     0.0039   17.3   0.1      0.018   15.2   0.0    2.0  2  RRM_7      RNA recognition motif
  ------ inclusion threshold ------
       0.05   13.3   0.2      0.076   12.7   0.2    1.2  1  OpcA       Outer membrane protein OpcA
      0.058   12.5   0.0      0.083   12.0   0.0    1.3  1  GIDA       Glucose inhibited division protein A
      0.079   12.6   0.1        1.1    8.9   0.0    2.4  2  SET_assoc  Histone lysine methyltransferase SET associated


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.0   1.7e-08     6e-05       1      60 [.       9      76 ..       9      82 .. 0.77
   2 !   21.7   0.0   3.5e-08   0.00013      13      69 ..     171     224 ..     169     225 .. 0.93

  Alignments for each domain:
  == domain 1  score: 22.8 bits;  conditional E-value: 1.7e-08
                EEEESETTTSSHHHHHHHHHTTSCE.EE.......EEEEEETTTSEEEEEEEEESSHHHHHHHHHHHT CS
       RRM_1  1 lfVgnLppdvteeeLkelFskfGpi.ks.......iklvrdetgkskgfafVeFeskedAekAlealn 60
                ++V++Lp+dvt +e+ke+Fsk+G i ++       ikl+++ +g+ kg a + F  +e+ + A + ++
  EPX73347.1  9 IYVSGLPKDVTVSEVKEVFSKCGIIaENvdtgtprIKLYTNDDGTLKGDALIVFFRSESIQLAEQLFD 76
                8************************4433333333677777888888888888888888887766555 PP

  == domain 2  score: 21.7 bits;  conditional E-value: 3.5e-08
                 HHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1  13 eeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 e++ +  +k+G++++++l+ +    + g+  ++F + e+Ae +++ ++g+ ++gr +
  EPX73347.1 171 EDITAEAEKCGRVTNVSLYDQ---EPEGIVTIRFSNNEEAEVCMRLMQGRYFDGRIV 224
                 77888889************7...******************************965 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0     5e-06     0.018       3      64 ..       8      69 ..       6      93 .. 0.80
   2 ?   -0.6   0.0      0.42   1.5e+03      57      74 ..      97     114 ..      81     137 .. 0.70

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 5e-06
       RRM_7  3 kvFvGGlPiDiteeelkatfkefgkvlvdwPkk.aeskkkaaenskaakgyvflvfedeksvk 64
                 ++v GlP D+t +e+k+ f++ g ++ +     ++ k ++++   + kg + +vf + +s++
  EPX73347.1  8 AIYVSGLPKDVTVSEVKEVFSKCGIIAENVDTGtPRIKLYTND-DGTLKGDALIVFFRSESIQ 69
                589*********************9876665443888888775.5568899999999999987 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.42
       RRM_7  57 fedeksvkaLleacteee 74 
                 +++eksv++ l+++ +++
  EPX73347.1  97 YKKEKSVNRDLSESVKKK 114
                 677888877776666655 PP

>> OpcA  Outer membrane protein OpcA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.2   2.1e-05     0.076      90     170 ..      72     151 ..      67     158 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 2.1e-05
        OpcA  90 qslsealklrvGaGlGyekskdavkiekntlsse..reafylkahadlesqlGsGWyinPWaevkvdldarlkenatvielak 170
                 + l++ +++r G+G+    +  +++ +k++       e+   k++   ++ql     i+ W ev+ ++d++ +++ ++i + k
  EPX73347.1  72 EQLFDDTEFRLGSGVKMRVQEASIDYKKEKSVNRdlSESVKKKVQRKRQQQLQ---KISSWGEVEEEVDEKRRKRFGKILVLK 151
                 6799*********************9887643221257899999999999997...69***********99999988886655 PP

>> GIDA  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   2.3e-05     0.083     174     233 ..      66     127 ..      11     158 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.3e-05
                 -THHHHHHHTT--EEEEEEEE--EEEGGGS-TTTSEEE---.SS-B-SSSSSSST.CG---- CS
        GIDA 174 eglseslkelgfellrlktgtppridkesidfskleeqsgd.kegeefsylnkpl.nkeqve 233
                 e+++ + + ++++ +rl  g++ r+++ sid++k  + ++d +e  + ++  k+  + ++++
  EPX73347.1  66 ESIQLAEQLFDDTEFRLGSGVKMRVQEASIDYKKEKSVNRDlSESVKKKVQRKRQqQLQKIS 127
                 444333444789999**************************655544444443331233344 PP

>> SET_assoc  Histone lysine methyltransferase SET associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.13   4.8e+02      44      54 ..     175     185 ..     169     189 .. 0.81
   2 ?    8.9   0.0   0.00032       1.1      38      58 ..     199     219 ..     197     222 .. 0.92

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.13
   SET_assoc  44 keAerCfraed 54 
                 +eAe+C r+++
  EPX73347.1 175 AEAEKCGRVTN 185
                 59****99987 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00032
   SET_assoc  38 ivFndskeAerCfraedgtkl 58 
                 i F++++eAe C+r + g+ +
  EPX73347.1 199 IRFSNNEEAEVCMRLMQGRYF 219
                 78**************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (268 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1727  (0.0963244); expected 358.6 (0.02)
Passed bias filter:                      792  (0.0441742); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.64u 0.35s 00:00:00.99 Elapsed: 00:00:00.52
# Mc/sec: 1550.82
//
Query:       EPX73348.1  [L=215]
Description: ran GTPase Spi1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.3e-47  161.4   0.0    1.5e-47  161.2   0.0    1.1  1  Ras           Ras family
    2.3e-28   98.8   0.0    5.2e-28   97.7   0.0    1.5  2  Roc           Ras of Complex, Roc, domain of DAPkinase
      1e-10   41.4   0.0    1.4e-10   40.9   0.0    1.1  1  Arf           ADP-ribosylation factor family
    0.00019   20.8   0.0    0.00024   20.5   0.0    1.2  1  Gtr1_RagA     Gtr1/RagA G protein conserved region
    0.00027   21.3   0.1     0.0022   18.4   0.1    2.1  1  RNA_helicase  RNA helicase
     0.0019   18.3   0.0     0.0036   17.4   0.0    1.5  1  MMR_HSR1      50S ribosome-binding GTPase
     0.0058   15.8   0.7        1.2    8.2   0.1    2.6  3  G-alpha       G-protein alpha subunit
  ------ inclusion threshold ------
      0.019   14.4   0.1      0.037   13.5   0.1    1.4  1  Pox_A32       Poxvirus A32 protein
      0.033   13.7   0.0      0.055   13.0   0.0    1.3  1  AAA_7         P-loop containing dynein motor region
      0.034   14.1   0.1        7.3    6.5   0.0    2.2  2  RsgA_GTPase   RsgA GTPase
      0.058   13.1   0.0      0.095   12.4   0.0    1.4  1  AAA_24        AAA domain
      0.089   13.2   0.0       0.14   12.6   0.0    1.4  1  AAA_16        AAA ATPase domain
        0.1   12.7   0.5       0.21   11.8   0.1    1.7  2  AAA_33        AAA domain
       0.12   12.4   0.1       0.19   11.7   0.1    1.4  1  TsaE          Threonylcarbamoyl adenosine biosynthesis protei
       0.16   11.3   0.3       0.24   10.7   0.0    1.5  2  Septin        Septin
       0.18   11.2   0.0       0.31   10.4   0.0    1.4  1  SRPRB         Signal recognition particle receptor beta subun
       0.21   10.9   0.1       0.28   10.5   0.1    1.2  1  ATPase        KaiC


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  161.2   0.0   1.5e-50   1.5e-47       1     160 [.      10     166 ..      10     168 .. 0.97

  Alignments for each domain:
  == domain 1  score: 161.2 bits;  conditional E-value: 1.5e-50
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeikr 99 
                 KlvlvGd+++GKt+++ r+ +++F+++y++T+gv+ +  +++++  e+ +++wDTAGqe+   lr+ yy ++++ ++++d+tsr +++nv +w++++ r
  EPX73348.1  10 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGELCFNVWDTAGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVR 108
                 99************************************************************************************************* PP

                 HSTTTSEEEEEEETTTGGGG-SS-HHHHHHHHHHHTSEEEEEBTTTTCTHHHHHHHHHHHH CS
         Ras 100 vaeenvpivLvGnKvDleekravsteegeelakelglkfletSAktnenveeafeellrei 160
                 v+e n+pivL+GnKvD++e r+v+++ + +++++++l+++++SAk+n+n+e+ f  l+r++
  EPX73348.1 109 VCE-NIPIVLCGNKVDVKE-RKVKAK-AITFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 166
                 ***.7*************6.999876.567***************************9986 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.7   0.0   4.9e-31   5.2e-28       1     119 [.      10     123 ..      10     124 .. 0.92
   2 ?   -2.2   0.0       4.4   4.7e+03      54      70 ..     138     154 ..     125     164 .. 0.62

  Alignments for each domain:
  == domain 1  score: 97.7 bits;  conditional E-value: 4.9e-31
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE..GH.HHHCHH CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd..sr.ssenlk 96 
                 K+vlvGd+g+GKt+++kr+++++f++k+ +t+gv+++  ++++        +  ++ +n+WDtaGqe+   l++ y+ + ++ i+++d  sr +++n+ 
  EPX73348.1  10 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHT--------NFGELCFNVWDTAGQEKLGGLRDGYYIQGQCGIIMFDvtSRiTYKNVP 100
                 99**********************************9887642........345799*******************************65334679*** PP

                 HHHHHHHHHCSSS-EEEEEE-TT CS
         Roc  97 eWlkelkkvagkspvilvgnkiD 119
                 +W ++l +v++++p++l+gnk+D
  EPX73348.1 101 HWWRDLVRVCENIPIVLCGNKVD 123
                 **********************9 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 4.4
                 TCEEEEEEEE-SGGCTT CS
         Roc  54 kkvklniWDtaGqerfr 70 
                 +k +l+ +D++ + +++
  EPX73348.1 138 RKKNLQYYDISAKSNYN 154
                 33467777777766654 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.9   0.0   1.3e-13   1.4e-10      14     138 ..       8     135 ..       2     165 .. 0.84

  Alignments for each domain:
  == domain 1  score: 40.9 bits;  conditional E-value: 1.3e-13
                 EEEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSSEEEEEEEE....TTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHHHHHH CS
         Arf  14 elrilllGLDnaGKtTilkklkleelvt.tvPTigfnveelei....knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkal 107
                  ++++l+G  ++GKtT +k+  ++e+++  + T+g +v+ l++     +l f+vwD  Gqekl  l + Y+ + +  i + D++ r   ++  +  + l
  EPX73348.1   8 TFKLVLVGDGGTGKTTFVKRHLTGEFEKkYIATLGVEVHPLHFhtnfGELCFNVWDTAGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDL 106
                 5799***************999998876489********99886666789***********************************99999999999999 PP

                 CTSGCCTTSEEEEEEE-TTSTTSS-HHHHHH CS
         Arf 108 leeeelkevallvlaNKqDlpealseeelre 138
                 ++    +++++++ +NK D++e   +++  +
  EPX73348.1 107 VRV--CENIPIVLCGNKVDVKERKVKAKAIT 135
                 986..5679***********98766555433 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   2.3e-07   0.00024       1     129 [.      10     130 ..      10     161 .. 0.72

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 2.3e-07
   Gtr1_RagA   1 kvLLmGksgsGKtsmrsi.iFdnylardtlrlgatidveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDvesreleedletl 98 
                 k++L+G +g GKt+  +  +  ++  + + +lg+ ++  + +  ++g+l++n+wD  Gqe++      ++  +i  ++g+++  fDv+sr    + ++ 
  EPX73348.1  10 KLVLVGDGGTGKTTFVKRhLTGEFEKKYIATLGVEVHPLHFHT-NFGELCFNVWDTAGQEKLGGL---RDGYYIQGQCGIIM--FDVTSRI---TYKNV 99 
                 899**********987651666788888999**9999999999.689*************99876...68888999998775..6888653...23333 PP

   Gtr1_RagA  99 keilealrqyspeakvfvlihKmDliqeder 129
                  +  + l+++ +++ +    +K+D  +++ +
  EPX73348.1 100 PHWWRDLVRVCENIPIVLCGNKVDVKERKVK 130
                 3444455555556666666666666555444 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.1   2.1e-06    0.0022       2     101 ..      12     134 ..      11     137 .. 0.85

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 2.1e-06
  RNA_helicase   2 wlyGpsgeGKStlake.Lakallkkl..................klkkkdsvys.rnpeddfwdgYt..gqevvvidDfgqvkdee.npsdlaelir 75 
                   +l+G+ g+GK+t++k+ L+ +++kk+                  +l  + +  + +++     dgY   gq  ++++D+ ++ + +  p+++ +l+r
    EPX73348.1  12 VLVGDGGTGKTTFVKRhLTGEFEKKYiatlgvevhplhfhtnfgELCFNVWDTAgQEKLGGLRDGYYiqGQCGIIMFDVTSRITYKnVPHWWRDLVR 108
                   799***********9878888888889************9999844444444443666677779998779999********998887788******* PP

  RNA_helicase  76 lvsstpyplnmasleekgtlftSkvv 101
                   ++++ p+ l+  +++ k++ +++k +
    EPX73348.1 109 VCENIPIVLCGNKVDVKERKVKAKAI 134
                   *****************999999987 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   3.4e-06    0.0036       2     113 ..      11     120 ..      10     121 .. 0.72

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 3.4e-06
                 EEEEESTTSSHHHHHHH.HHTS.TEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHH.HHHHHHHHHHCTSEEEEEEETTTTCSHHHHHHH CS
    MMR_HSR1   2 vaivGrpNvGKStLina.ltge.kaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseek.glgkaflaleeadlillvvdaseeklkpldeel 97 
                  ++vG   +GK+t++++ ltge + +  ++ g+  ++ +++ ++++  ++++Dt+G  e    +  gl++ +    ++ +i++ v ++  ++k++ +  
  EPX73348.1  11 LVLVGDGGTGKTTFVKRhLTGEfEKKYIATLGVEVHPLHFHTNFGELCFNVWDTAG-QE----KLgGLRDGYYIQGQCGIIMFDVTSR-ITYKNVPHWW 103
                 689************8736788878999999**********9999999********.54....5579999999777777777777644.3344433222 PP

                 HHHHHH..TTSEEEEEEE CS
    MMR_HSR1  98 eellee..akkplilvln 113
                  +l  +  +++p++l+ n
  EPX73348.1 104 RDLV-RvcENIPIVLCGN 120
                 2222.1245666666666 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.1    0.0012       1.2      23      42 ..       8      27 ..       1      36 [. 0.86
   2 ?   -1.2   0.0      0.86   9.1e+02     186     213 ..      38      68 ..      32      70 .. 0.78
   3 ?    5.1   0.0      0.01        11     266     294 ..     109     137 ..      98     171 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0012
                EEEEEEEESTTSSHHHHHHH CS
     G-alpha 23 evkllllGqseSGKsTilkq 42
                ++kl+l+G ++ GK+T++k 
  EPX73348.1  8 TFKLVLVGDGGTGKTTFVKR 27
                68***************995 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.86
                 ----SEEEEEEEC....T-TEEEEEEEE-SSH CS
     G-alpha 186 lktvGisetkfev....dsklefrivdvgGqr 213
                 + t+G++ + + +    + +l f+++d++Gq 
  EPX73348.1  38 IATLGVEVHPLHFhtnfG-ELCFNVWDTAGQE 68 
                 678899988887765546.7889*******96 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.01
                 GGTTSEEEEEEE-HHHHHHHCCCS-GGGC CS
     G-alpha 266 llkntpiiLflnKlDileeKlkkgklsky 294
                   +n+pi+L  nK+D+ e+K+k + ++ +
  EPX73348.1 109 VCENIPIVLCGNKVDVKERKVKAKAITFH 137
                 5789*****************99876653 PP

>> Pox_A32  Poxvirus A32 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.1   3.5e-05     0.037      13      35 ..       8      30 ..       3      42 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 3.5e-05
     Pox_A32 13 pFrlalvGgsGsGktvyLlsLlr 35
                 F+l+lvG  G Gkt++++  l+
  EPX73348.1  8 TFKLVLVGDGGTGKTTFVKRHLT 30
                6****************997554 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   5.3e-05     0.055      35      63 ..      10      38 ..       3      48 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 5.3e-05
       AAA_7 35 pvllvGptGtGKtviikd.llkkldkekyl 63
                +++lvG+ GtGKt+ +k+ l+ +++ +ky+
  EPX73348.1 10 KLVLVGDGGTGKTTFVKRhLTGEFE-KKYI 38
                5789**************6666666.4444 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.0    0.0069       7.3     102     118 ..      11      27 ..       3      44 .. 0.79
   2 ?    5.4   0.0     0.014        15      45      92 ..     111     157 ..     101     167 .. 0.79

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0069
                  EEEECSTTSSHHHHHHH CS
  RsgA_GTPase 102 svlvGqSGvGKStLina 118
                   vlvG  G GK+t++++
   EPX73348.1  11 LVLVGDGGTGKTTFVKR 27 
                  79************975 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.014
                  TT-EEEEEEE-GGG--HHHHHHHHHHHHHHTTSEEEE--TTTHTTHHH CS
  RsgA_GTPase  45 kgiepvivlnKiDlleeeeeleelkeelealgyevllvsaktkeglee 92 
                  ++i++v++ nK+D+ e++    +  +  ++ +++ + +sak++ ++e+
   EPX73348.1 111 ENIPIVLCGNKVDVKERKV-KAKAITFHRKKNLQYYDISAKSNYNFEK 157
                  689***********99999.6666677778889999999998877776 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0     9e-05     0.095       4      22 ..      10      28 ..       8      68 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 9e-05
      AAA_24  4 kiliyGpsgiGKTtlakel 22
                k++++G+ g+GKTt++k+ 
  EPX73348.1 10 KLVLVGDGGTGKTTFVKRH 28
                899*************986 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   0.00013      0.14      27      55 ..      11      40 ..       5     108 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00013
      AAA_16 27 vllsGesGvGKsslv.rellralekdggif 55
                ++l+G+ G+GK++ v r+l  ++ek+++ +
  EPX73348.1 11 LVLVGDGGTGKTTFVkRHLTGEFEKKYIAT 40
                579************777777888885333 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1    0.0002      0.21       3      20 ..      12      29 ..      11      44 .. 0.88
   2 ?   -3.0   0.0         7   7.4e+03      83     104 ..     101     118 ..      86     140 .. 0.56

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.0002
      AAA_33  3 llvGlpGsGKstlaerll 20
                +lvG  G+GK+t+++r+l
  EPX73348.1 12 VLVGDGGTGKTTFVKRHL 29
                789*************98 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 7
      AAA_33  83 rerarflklarrlgvpvrivvv 104
                 + +++++++ +  +  + iv +
  EPX73348.1 101 HWWRDLVRVCE--N--IPIVLC 118
                 45555555555..3..234444 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   0.00018      0.19      21      41 ..      10      30 ..       1      39 [. 0.80

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00018
                EEEEEESTTSSHHHHHHHHHH CS
        TsaE 21 vilLeGdLGaGKTtlvrglak 41
                 ++L Gd G+GKTt+v+  + 
  EPX73348.1 10 KLVLVGDGGTGKTTFVKRHLT 30
                489*************98665 PP

>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00022      0.24       4      25 ..       8      29 ..       5      66 .. 0.85
   2 ?   -3.0   0.1       3.3   3.5e+03     145     179 ..     113     146 ..     104     157 .. 0.50

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00022
                EEEEEEEEBTTSSCCCCCCTTS CS
      Septin  4 eftlmvvGesglGkttlintlf 25
                +f l++vG+ g+Gktt+++  +
  EPX73348.1  8 TFKLVLVGDGGTGKTTFVKRHL 29
                699***************9655 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 3.3
                 EEEESSGGGS-HHHHHHHHHHHHHHHHHTT----- CS
      Septin 145 iPviaKaDtltkeElkefKkkireeleeeeikiyk 179
                 iP++   + +  +E k +K k ++  +++++++y+
  EPX73348.1 113 IPIVLCGNKVDVKERK-VKAKAITFHRKKNLQYYD 146
                 5555544444445543.333333344555555555 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00029      0.31       6      94 ..      11     101 ..       7     143 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00029
                 EEEE-STTSSHHHHHHHHHHSS---B---S..S-EEETTG....GGTT-SEEEETT-GCCSHHHHHHHHHHGGEEEEEEEEETTS-HHHHHH CS
       SRPRB   6 vllvGlsdsGKTslftrLttdsvkktvtSq..essaalkv.ksekgskltliDfPGheklrqklleklkaksslkglvfvvDStidpkevke 94 
                 ++lvG   +GKT++ +r +t++++k +++    +   l++ ++  +  +++ D  G+ekl   l + +  + +   ++f v S i  k+v +
  EPX73348.1  11 LVLVGDGGTGKTTFVKRHLTGEFEKKYIATlgVEVHPLHFhTNFGELCFNVWDTAGQEKLG-GLRDGYYIQGQCGIIMFDVTSRITYKNVPH 101
                 789******************9999998884333344444456667789999999999996.588888888888889999999999998754 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.1   0.00026      0.28      20      73 ..      10      60 ..       1      72 [. 0.74

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00026
      ATPase 20 rvvlitGepGtGKtifalqFlikgaekygepgvfvtveepaedlrenakslGwd 73
                + v ++G+ GtGKt+f+++ l    ek  +      ve ++ +++ n+ +l  +
  EPX73348.1 10 KLV-LVGDGGTGKTTFVKRHLTGEFEK--KYIATLGVEVHPLHFHTNFGELCFN 60
                555.46***************999888..5566677888888888887766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       504  (0.0281109); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        84  (0.00468515); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 1577.74
//
Query:       EPX73349.1  [L=832]
Description: boi family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      6e-15   55.1   0.0    1.1e-14   54.3   0.0    1.4  1  SAM_2     SAM domain (Sterile alpha motif)
    2.2e-12   47.4   0.0    5.9e-12   46.0   0.0    1.7  1  PH        PH domain
    3.5e-11   43.4   0.0    5.9e-11   42.6   0.0    1.4  1  SAM_1     SAM domain (Sterile alpha motif)
    1.7e-10   40.3   0.1    4.6e-10   38.9   0.1    1.8  1  SH3_1     SH3 domain
    1.1e-08   35.5   0.2    3.8e-08   33.7   0.0    2.1  2  PH_11     Pleckstrin homology domain
    1.9e-08   34.0   0.0    3.3e-08   33.2   0.0    1.4  1  SH3_9     Variant SH3 domain
     0.0016   18.7   0.1      0.019   15.2   0.1    2.3  2  PH_8      Pleckstrin homology domain
     0.0029   17.3   0.0     0.0051   16.5   0.0    1.4  1  SH3_2     Variant SH3 domain
     0.0086   16.0   0.0       0.02   14.9   0.0    1.5  1  SAM_4     SAM domain (Sterile alpha motif)


Domain annotation for each model (and alignments):
>> SAM_2  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.3   0.0   5.4e-18   1.1e-14       4      66 .]     241     302 ..     238     302 .. 0.97

  Alignments for each domain:
  == domain 1  score: 54.3 bits;  conditional E-value: 5.4e-18
                 HHHHHHHHHHHHTTTGGGHHHHHHTTCSHHHHHTTSCHHHHHHTTHHHHHHHHHHHHHHHHHH CS
       SAM_2   4 wsledvaeWLrsiglkqytdnFrdagitgaelllrlteedLkrlGitsvghrkkilkkiqelk 66 
                 ws+ +v +WL++ gl+ +++nF++++i g e+ll+ + + Lk+l its+g r+++l+kiq+lk
  EPX73349.1 241 WSTAEVIDWLKNAGLGSVAPNFMENEING-EILLNTDSSVLKELNITSYGKRFEVLRKIQQLK 302
                 *****************************.*******************************97 PP

>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.0   0.0   2.9e-15   5.9e-12       3     103 ..     660     765 ..     658     766 .. 0.85

  Alignments for each domain:
  == domain 1  score: 46.0 bits;  conditional E-value: 2.9e-15
                 EEEEEEEETSSSSCSEEEEEEEEETTEEEEESSTTCTTESSEEEEEESTTEEEEEEEC.............TTSSSSTSEEEEEESTSSSTEEEEEEES CS
          PH   3 keGwLlkkgsgkkkswkkrwfvLkdsellyykndksekdkepkgsislsncevvevva.............tedpkrkfcfelriverngsrtyllqas 88 
                 ++Gw+ k++ + +  wk r+fvLk+++l+yy +     d + kg i++++++v +v++             +  ++   + ++ ++    ++++++ ++
  EPX73349.1 660 CHGWMRKRSDRYG-VWKARYFVLKGTRLSYYHSL---NDTSEKGLIDITSHRVCKVEDlvlsggktaiklaP-PAPGAAKAAVMFT--P-PKVHYFICE 750
                 89**********9.********************...*******************9999999999988843.4444444444344..3.5******** PP

                 SHHHHHHHHHHHHHH CS
          PH  89 seeerkeWikaiqsa 103
                 ++++ ++W +a+ +a
  EPX73349.1 751 NKDDINRWSSAFLKA 765
                 *********998765 PP

>> SAM_1  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.6   0.0     3e-14   5.9e-11       2      64 .]     240     302 ..     239     302 .. 0.98

  Alignments for each domain:
  == domain 1  score: 42.6 bits;  conditional E-value: 3e-14
                 CTTHSSHHHHHHHTTSGGGHHHHHTTTSSHHHHTTSCHHHHHHCTTTSHHHHHHHHHHHHHHH CS
       SAM_1   2 kwsvedVgeWLesiglgqYadlFrageidgdaLlllteddLeklgvtllGHrkkIlyaIqrLk 64 
                 +ws  +V++WL+  glg  a +F+++ei+g+ Ll+ ++++L++l++t+ G r   l+ Iq+Lk
  EPX73349.1 240 HWSTAEVIDWLKNAGLGSVAPNFMENEINGEILLNTDSSVLKELNITSYGKRFEVLRKIQQLK 302
                 8************************************************************98 PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.9   0.1   2.3e-13   4.6e-10       1      48 []       8      57 ..       8      57 .. 0.96

  Alignments for each domain:
  == domain 1  score: 38.9 bits;  conditional E-value: 2.3e-13
                EESSSBEXSSTTBXEBSTTEEEEEEEECSS...SEEEEEETTSTEEEEEEG CS
       SH3_1  1 iAlYDYeaeesdELsfkkGDviivleksed...gWwkgrlkgtgkeGliPs 48
                +Al+ +++++sdEL++ +G+++ +++++e+   gWw+++++ +  +G++P+
  EPX73349.1  8 VALHSFPGKSSDELPLIEGNKYLLIKMDEEfgdGWWEAEDQEG-NRGIFPA 57
                7****************************************95.7*****6 PP

>> PH_11  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1       3.8   7.6e+03      45      72 ..      69      96 ..      57     103 .. 0.55
   2 !   33.7   0.0   1.9e-11   3.8e-08       2     101 ..     661     761 ..     660     765 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 3.8
       PH_11 45 ngseaklkadlisaalfkidsirssksd 72
                n ++a+ +   +s++++++ ++ ss+s+
  EPX73349.1 69 NHENARNEKADVSISTTELTESSSSSSN 96
                4445555555555566655555555555 PP

  == domain 2  score: 33.7 bits;  conditional E-value: 1.9e-11
       PH_11   2 kGylkkkgsk..aWkrrwfavlkdgvLeyYksekkkvvkhviklSngseaklkadlisaalfkidsirssksddllleistetkifflkgdsneeteeW 98 
                 +G+++k++++  +Wk+r+f vlk ++L+yY+s ++   k +i +    ++k++  + s+  + i+ +       + + ++t  k+ ++ ++++++++ W
  EPX73349.1 661 HGWMRKRSDRygVWKARYF-VLKGTRLSYYHSLNDTSEKGLIDITSHRVCKVEDLVLSGGKTAIKLAPPAPGAAKAAVMFTPPKVHYFICENKDDINRW 758
                 89*****************.***********999999999*************************99999999************************** PP

       PH_11  99 vea 101
                   a
  EPX73349.1 759 SSA 761
                 876 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.2   0.0   1.7e-11   3.3e-08       1      49 []       9      61 ..       9      61 .. 0.91

  Alignments for each domain:
  == domain 1  score: 33.2 bits;  conditional E-value: 1.7e-11
       SH3_9  1 AlypyepreddeLsLqrGDvitvieese...dgWlegsl.tGrtGlvPanyve 49
                Al+ +  ++ deL+L +G  +++i+++e   dgW+e++  +G++G +Pa+ ve
  EPX73349.1  9 ALHSFPGKSSDELPLIEGNKYLLIKMDEefgDGWWEAEDqEGNRGIFPASHVE 61
                89**********************7754477*******77*********9886 PP

>> PH_8  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.1   9.6e-06     0.019       5      48 ..     665     706 ..     662     716 .. 0.82
   2 ?    0.6   0.0      0.35   6.9e+02      67      88 ..     744     765 ..     733     766 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 9.6e-06
        PH_8   5 kkrrkklqgyakRfFvLdlksstlsYyrddnssalrgkiplsla 48 
                 +kr  +   ++ R+FvL  k + lsYy++ n+++ +g i ++  
  EPX73349.1 665 RKRSDRYGVWKARYFVL--KGTRLSYYHSLNDTSEKGLIDITSH 706
                 5667788889*******..*************999998888755 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.35
        PH_8  67 vWeLkasnekdfqeWvealeka 88 
                 v   + +n+ d+++W  a+ ka
  EPX73349.1 744 VHYFICENKDDINRWSSAFLKA 765
                 6667889***********9775 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   2.6e-06    0.0051       2      55 ..       7      61 ..       6      63 .. 0.73

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 2.6e-06
                EEESS-B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEE.CCCEEEEEGCGEE CS
       SH3_2  2 vraiedyvgedkseLsfkkGdvikvlslgskdsdgwwegev.gGrvGlfPsslve 55
                v+a+ ++ g + +eL + +G    ++   ++  dgwwe+e   G +G+fP s+ve
  EPX73349.1  7 VVALHSFPGKSSDELPLIEGNKYLLIKMDEEFGDGWWEAEDqEGNRGIFPASHVE 61
                6667777777777777777775455522255556*******9************8 PP

>> SAM_4  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   9.8e-06      0.02       7      75 ..     242     308 ..     238     314 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 9.8e-06
       SAM_4   7 atsewiqffkeagipaglavnyavsfvdnriqknmlldlskeimnelgitvvgdiiailkha...kvvyrqd 75 
                 +t+e i+++k+ag+ +      a  f++n i+ ++ll+ +  +++el it  g    +l++    k +y+q 
  EPX73349.1 242 STAEVIDWLKNAGLGS-----VAPNFMENEINGEILLNTDSSVLKELNITSYGKRFEVLRKIqqlKDIYQQT 308
                 68999999**999864.....5778****************************9999998761115567665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (832 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       840  (0.0468515); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.66u 0.30s 00:00:00.96 Elapsed: 00:00:00.43
# Mc/sec: 5767.93
//
Query:       EPX73350.1  [L=108]
Description: V-type ATPase subunit G [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.4e-30  105.1  16.5    2.8e-30  105.0  16.5    1.0  1  V-ATPase_G       Vacuolar (H+)-ATPase G subunit
  ------ inclusion threshold ------
      0.012   15.1  19.3       0.08   12.4  10.0    2.0  2  DUF3552          Domain of unknown function (DUF3552)
       0.05   14.0  16.3       0.31   11.5  15.9    1.9  2  V-ATPase_G_2     Vacuolar (H+)-ATPase G subunit
      0.063   13.7   0.1       0.14   12.6   0.0    1.7  2  Fer4_23          4Fe-4S iron-sulfur cluster binding domain
       0.12   12.5  20.1       0.37   10.9  11.6    2.1  2  ATP-synt_B       ATP synthase B/B' CF(0)
       0.14   10.4   6.0       0.16   10.2   6.0    1.0  1  Gp58             gp58-like protein
       0.18   10.4   7.2        0.2   10.3   7.2    1.0  1  Peptidase_S46    Peptidase S46
        0.2   11.6   4.6       0.24   11.3   4.6    1.0  1  CemA             CemA family
       0.48   10.5   3.3         11    6.1   0.4    3.0  3  Con-6            Conidiation protein 6
       0.86    9.9   8.8          2    8.7   8.5    1.9  1  DUF4230          Protein of unknown function (DUF4230)
        0.9    7.6  10.5          1    7.5  10.5    1.0  1  HSP70            Hsp70 protein
        1.2    9.6   5.7        1.3    9.5   5.7    1.0  1  NBD_C            Nucleotide-binding C-terminal domain
        1.3    9.3  10.2         19    5.5  10.2    2.1  1  PEP-utilisers_N  PEP-utilising enzyme, N-terminal
        2.5    7.8   9.5        2.8    7.7   9.5    1.1  1  AAA_11           AAA domain
        4.7    6.7   9.2        5.2    6.6   9.2    1.1  1  HAUS6_N          HAUS augmin-like complex subunit 6 N-terminu
        7.2    7.3  10.4         43    4.8   0.9    2.2  2  DUF883           Bacterial protein of unknown function (DUF88


Domain annotation for each model (and alignments):
>> V-ATPase_G  Vacuolar (H+)-ATPase G subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.0  16.5   2.5e-33   2.8e-30       2     105 .]       5     108 .]       4     108 .] 0.98

  Alignments for each domain:
  == domain 1  score: 105.0 bits;  conditional E-value: 2.5e-33
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHH CS
  V-ATPase_G   2 qsqgIqqLLqAEkeAaeivkeArkrkakrlkqAkeeAekEieeyrakkekefkekeaeklgseeelekkieketeekikelkesvkknkeavvkellkl 100
                 +++gIqqLL+AEk A+ iv +Ar+++ +rlk+A++eA++Ei+ey a kekefk+ ea+++g ++++e++ +k++e+ ++++k+++k+n+++v++ +l +
  EPX73350.1   5 TNSGIQQLLEAEKVARSIVDKARQHRVQRLKDARQEAKAEIDEYAASKEKEFKDAEAKASGIYSQTEEQTKKQVEKDFESIKKDAKENSDKVINAILAI 103
                 689************************************************************************************************ PP

                 HTSXX CS
  V-ATPase_G 101 vldvk 105
                  +dvk
  EPX73350.1 104 ACDVK 108
                 **997 PP

>> DUF3552  Domain of unknown function (DUF3552)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4  10.0   7.1e-05      0.08      23      78 ..       6      61 ..       1      64 [. 0.91
   2 ?    8.8   3.6   0.00087      0.98     148     193 ..      58     104 ..      56     106 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 7.1e-05
     DUF3552 23 kiaekkiaeAeeeAkkiieeAkkeAeakkkealleakeeihklreelekelkerrn 78
                ++  +++ eAe+ A++i+++A+++  +  k a  eak ei ++ +  eke+k+ ++
  EPX73350.1  6 NSGIQQLLEAEKVARSIVDKARQHRVQRLKDARQEAKAEIDEYAASKEKEFKDAEA 61
                6667899********************************************99765 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00087
     DUF3552 148 keeAkei.lleeveeelkheaAkmikeieeeakeeAdkkAkeiialA 193
                  +eAk+  + +++ee++k+++ k    i+++ake++dk  + i+a A
  EPX73350.1  58 DAEAKASgIYSQTEEQTKKQVEKDFESIKKDAKENSDKVINAILAIA 104
                 57888644999******************************999987 PP

>> V-ATPase_G_2  Vacuolar (H+)-ATPase G subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.2      0.27     3e+02      19      37 ..      10      28 ..       6      30 .. 0.77
   2 ?   11.5  15.9   0.00028      0.31      18      83 ..      31      96 ..      15     102 .. 0.89

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.27
                  HHHHHHHHHHHHHHHHHHH CS
  V-ATPase_G_2 19 qrlEaArkeaereveaAea 37
                  q+l +A k a+  v++A++
    EPX73350.1 10 QQLLEAEKVARSIVDKARQ 28
                  6777788888888888876 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 0.00028
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  V-ATPase_G_2 18 dqrlEaArkeaereveaAeaeAarilreAeakakalqaeyeqelaeevarireeararaeaeaqav 83
                   qrl +Ar+ea++e+++  a  ++  ++Aeaka  + ++ e++++++v++  e +++ a++++ +v
    EPX73350.1 31 VQRLKDARQEAKAEIDEYAASKEKEFKDAEAKASGIYSQTEEQTKKQVEKDFESIKKDAKENSDKV 96
                  589*********************************************************999887 PP

>> Fer4_23  4Fe-4S iron-sulfur cluster binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0         5   5.6e+03      28      28 ..      28      28 ..      11      44 .. 0.59
   2 ?   12.6   0.0   0.00012      0.14       6      38 ..      53      85 ..      49     100 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 5
     Fer4_23 28 d 28
                +
  EPX73350.1 28 Q 28
                1 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 0.00012
     Fer4_23  6 vtslretaeRQtGiYavvkkltdeqaervveal 38
                 +++++  ++ +GiY+ +++ t++q+e+  e++
  EPX73350.1 53 EKEFKDAEAKASGIYSQTEEQTKKQVEKDFESI 85
                57899*********************9877765 PP

>> ATP-synt_B  ATP synthase B/B' CF(0)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9  11.6   0.00033      0.37      58     111 ..      10      63 ..       2      65 .. 0.89
   2 ?    6.0   3.2     0.011        12      53      87 ..      68     102 ..      56     105 .. 0.66

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00033
  ATP-synt_B  58 qqlkeAraeAaeiiknAkkeaeklkeeieaeaeaeaerlkesAaaeIeqekdra 111
                 qql eA++ A+ i+++A++ + +  +++++ea+ae++   +s+++e + ++++a
  EPX73350.1  10 QQLLEAEKVARSIVDKARQHRVQRLKDARQEAKAEIDEYAASKEKEFKDAEAKA 63 
                 899999************99999999999*******999999999999888776 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.011
  ATP-synt_B  53 laeaeqqlkeAraeAaeiiknAkkeaeklkeeiea 87 
                  + +eq +k+++++ + i k+Ak+++ k+ ++i a
  EPX73350.1  68 SQTEEQTKKQVEKDFESIKKDAKENSDKVINAILA 102
                 34456667788888888888888888888877765 PP

>> Gp58  gp58-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   6.0   0.00015      0.16     109     193 ..       5      90 ..       3     101 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00015
        Gp58 109 nnkgmlreyaddeikteivesaegia.erisedtdkklalinetieGirreyqdadrelsssyqagieGlkatlasdklglkaeiq 193
                 +n g+ +    +++   iv++a++ + +r+++  ++  a i+e      +e++da+ + s  y ++ e  k+++++d   +k + +
  EPX73350.1   5 TNSGIQQLLEAEKVARSIVDKARQHRvQRLKDARQEAKAEIDEYAASKEKEFKDAEAKASGIYSQTEEQTKKQVEKDFESIKKDAK 90 
                 56677777788999********9975278898888999*************************************99877666554 PP

>> Peptidase_S46  Peptidase S46
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   7.2   0.00018       0.2     264     511 ..      11     103 ..       2     108 .] 0.49

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00018
                    HHHHTHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHCT-H.HHHTTHHHHHHHH CS
  Peptidase_S46 264 errdvalparievleeriallkeemkkdpeirikyasklagleNylKnliGmlealkkkkvlekkqaeeaalrawlkkdpekkekygkalseleal 359
                    +  + +  ar  v ++r++ +++ +++++e++ +  +  a+ e  +                                                  
     EPX73350.1  11 QLLEAEKVARSIVDKARQHRVQRLKDARQEAKAEIDEYAASKEKEF-------------------------------------------------- 56 
                    3333333333333444444444444444444444444444444444.................................................. PP

                    HHHHHHHHHHHHHHHHHTTTTSHHHHHHHHHHHHHHHHH....HH-HHHHHHHHHHHHHHCHHHHCS--HHHHHHHHHHHHHHHHHHS-GGG--S- CS
  Peptidase_S46 360 vkekrklaersalleeaessgsellslarklvrlaeerekpdaereeeyqeralealekeleridkdldaevdkavlaallkeyreklkaerlpav 455
                                                                                                                    
     EPX73350.1   - ------------------------------------------------------------------------------------------------   -
                    ................................................................................................ PP

                    ---SS......-S-SHHCCCCC-TTSSCHHHHHHT-SHHCHHHHCC-HHHHHHHHH CS
  Peptidase_S46 456 dkvlgkeskgdlealvdrlvakskladeakrkalleeakaaveaskDplielaval 511
                             +d ea+++ ++++++ ++++++++ +e+ k+++++++D++i+ + a+
     EPX73350.1  57 ---------KDAEAKASGIYSQTEEQTKKQVEKDFESIKKDAKENSDKVINAILAI 103
                    .........55666666666666666666666666666666666666666555544 PP

>> CemA  CemA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   4.6   0.00022      0.24      23     112 ..      11     102 ..       6     107 .. 0.66

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00022
        CemA  23 qqlsknlvveplvdrflekeqaelflnkeleeealeelkefeekleleel...igeapelseeeieeelkekaeelakeyreesseaiknifa 112
                 q l  + v++++vd+ ++++ + l+  ++  +  + e +  +ek e++ +    + + + +ee++++++++  e ++k+++e+s + i+ i+a
  EPX73350.1  11 QLLEAEKVARSIVDKARQHRVQRLKDARQEAKAEIDEYAASKEK-EFKDAeakASGIYSQTEEQTKKQVEKDFESIKKDAKENSDKVINAILA 102
                 44566788889999887665555554444444445555444444.444441114444557899********************9999988876 PP

>> Con-6  Conidiation protein 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       1.5   1.6e+03      21      31 ..      25      35 ..      24      36 .. 0.80
   2 ?    6.1   0.4      0.01        11      20      33 ..      35      48 ..      35      49 .. 0.92
   3 ?    3.7   0.0     0.058        65      20      32 ..      87      99 ..      87     100 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 1.5
       Con-6 21 eAKehAkeeLe 31
                 A++h  ++L+
  EPX73350.1 25 KARQHRVQRLK 35
                69999999986 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.01
       Con-6 20 eeAKehAkeeLekl 33
                + A+++Ak e++++
  EPX73350.1 35 KDARQEAKAEIDEY 48
                579*********98 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.058
       Con-6 20 eeAKehAkeeLek 32
                + AKe++ +++ +
  EPX73350.1 87 KDAKENSDKVINA 99
                67*******9976 PP

>> DUF4230  Protein of unknown function (DUF4230)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   8.5    0.0018         2      96     140 ..      42      87 ..       3      92 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0018
     DUF4230  96 dedeeellkeaeakike.eaeenglleqAeenakklleqllkslgy 140
                 +++  e+ ++ e++ k+ ea+++g+++q+ee++kk++e+ ++s+  
  EPX73350.1  42 KAEIDEYAASKEKEFKDaEAKASGIYSQTEEQTKKQVEKDFESIKK 87 
                 447788889999999998899*****************99888765 PP

>> HSP70  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5  10.5   0.00089         1     501     585 ..      12      95 ..       2     107 .. 0.66

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.00089
                 SSBHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSTHHHHHHHHHHHHHHHCHTTSSCHHHHHHHHHH CS
       HSP70 501 glseeeiekmvkdaeesaeedkkkkeaieakneaeelvyslekkleeeaekvseaekekvesaieeLkeeleeeekeeieaktee 585
                  l++e++++ + d+ +++  ++ k ++ eak+e +e++ s ek++++++ k+s    ++ e++++++++  e+ +k++ +++ ++
  EPX73350.1  12 LLEAEKVARSIVDKARQHRVQRLKDARQEAKAEIDEYAASKEKEFKDAEAKASGIYSQTEEQTKKQVEKDFESIKKDA-KENSDK 95 
                 4788999999999999999999999999*****************999666655544444444444444432222222.222222 PP

>> NBD_C  Nucleotide-binding C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   5.7    0.0012       1.3       8     104 ..       2     105 ..       1     108 [] 0.69

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0012
                 SHHHHHHHHHHCTS.CT.SEEE.....EEEHHHHHSCCTCHHHHHHHHHHHHHCCTCC.TSSEEEEEECTGHHHH.HH---HHCCC-HHHH..HHHHHH CS
       NBD_C   8 spkTtaQlaallkeges.vpvl.....eldvealledeesaeaeieraleqaeealla.agkdvlvytsrepedvrdaleslqaelglera..geriaa 97 
                 s  T+  +++ll+++ + ++++     +  v++l + +++a+aei+++++  e++ ++ + k+  +y+++e+++ + ++e+  ++ + +++  ++++ +
  EPX73350.1   2 STQTNSGIQQLLEAE-KvARSIvdkarQHRVQRLKDARQEAKAEIDEYAASKEKEFKDaEAKASGIYSQTEEQTKK-QVEKDFESIKKDAKenSDKVIN 98 
                 666777777777665.222333366669999999999999***************777559999999988888874.4444333333333345888888 PP

                 HHHHHHH CS
       NBD_C  98 alaeiar 104
                 a+ +ia 
  EPX73350.1  99 AILAIAC 105
                 8887775 PP

>> PEP-utilisers_N  PEP-utilising enzyme, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5  10.2     0.017        19      20      55 ..      18      58 ..       4     108 .] 0.75

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.017
                     -----G.GGHHHHHHHHHHHHHHHHHHHHHHHHHH.....T CS
  PEP-utilisers_N 20 eeeeveaedveaelerleeAlekvreelealaeka.....l 55
                       +++ ++  ++ ++rl++A++++++e+++ a++       
       EPX73350.1 18 VARSIVDKARQHRVQRLKDARQEAKAEIDEYAASKekefkD 58
                     45677888899*****************9955333334431 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   9.5    0.0025       2.8     106     193 ..      11     101 ..       1     105 [. 0.60

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0025
      AAA_11 106 svsleekvekrlekee...kaqlakeiskeleklakelrafeeeeekeklkkskekskskleqerrklkkerkelskeleeaeesleeevl 193
                 ++   ekv +++  +    ++q  k+ ++e +++ +e  a++e+e k++++k++   ++++eq++++++k  ++++k+ +e  +++ + +l
  EPX73350.1  11 QLLEAEKVARSIVDKArqhRVQRLKDARQEAKAEIDEYAASKEKEFKDAEAKASGIYSQTEEQTKKQVEKDFESIKKDAKENSDKVINAIL 101
                 4444444444444444111444445555555555555555555555588888888888888888888888888888888888888776665 PP

>> HAUS6_N  HAUS augmin-like complex subunit 6 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   9.2    0.0046       5.2     150     226 ..      24      98 ..       2     100 .. 0.67

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0046
     HAUS6_N 150 aahrvslrrflrekaaadrarqkyqenaqllekkerelraeleelqaelkaekeaakkekkeasedaeee.kikkvrn 226
                  +   +++r++r k a  +a +++ e+a++ ek+ ++ +a+ + + ++++ +  +++ ek+ +s++++++ +++kv n
  EPX73350.1  24 DKA--RQHRVQRLKDARQEAKAEIDEYAASKEKEFKDAEAKASGIYSQTEEQ-TKKQVEKDFESIKKDAKeNSDKVIN 98 
                 444..4455555555555569************************9999844.3334444444444444458888765 PP

>> DUF883  Bacterial protein of unknown function (DUF883)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   8.5     0.071        79      17      65 ..      22      70 ..       3      81 .. 0.43
   2 ?    4.8   0.9     0.038        43      10      32 ..      59      81 ..      52     106 .. 0.44

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.071
      DUF883 17 llkeaadeageeaeelRerleerlerarerlrdaeeavaerakeaaeaa 65
                ++++a ++  + ++++R+++++++++  ++ ++  ++++++a+ +  ++
  EPX73350.1 22 IVDKARQHRVQRLKDARQEAKAEIDEYAASKEKEFKDAEAKASGIYSQT 70
                3333333333333444444443333333333333333333333333333 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.038
      DUF883 10 lladleellkeaadeageeaeel 32
                + a++  + +++++++++++e+ 
  EPX73350.1 59 AEAKASGIYSQTEEQTKKQVEKD 81
                44444444444443333333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2947  (0.164371); expected 358.6 (0.02)
Passed bias filter:                      781  (0.0435607); expected 358.6 (0.02)
Passed Vit filter:                       105  (0.00585643); expected 17.9 (0.001)
Passed Fwd filter:                        20  (0.00111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 782.42
//
Query:       EPX73351.1  [L=482]
Description: hypothetical protein SOCG_01101 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.017   15.2   0.0      0.058   13.5   0.0    1.9  1  PPR_3     Pentatricopeptide repeat domain
       0.12   12.5   1.4       0.53   10.4   1.4    2.1  1  DUF4363   Domain of unknown function (DUF4363)


Domain annotation for each model (and alignments):
>> PPR_3  Pentatricopeptide repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   6.5e-06     0.058      11      60 ..     363     412 ..     350     414 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 6.5e-06
       PPR_3  11 ikldvvtYthLLtayanagnkklalevlermkkkgikPtvvtyNailgvi 60 
                  ++ + t ++L t++ + +++k ++  l+ +    ++P+ vty ++l ++
  EPX73351.1 363 YEPTIATANALFTVASRLRDEKWLFTALDLISNYELEPSHVTYRSLLITY 412
                 57889999**************************************9888 PP

>> DUF4363  Domain of unknown function (DUF4363)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.4     6e-05      0.53      42      99 ..     117     174 ..     116     178 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 6e-05
     DUF4363  42 keWekkkkklsifiehdeldeietslaklkayietedkeealaelaelkfllehikek 99 
                 ++ ++  ++l++ ieh+e+   +   + +k+yi+ + ++ a+   + + + +e + + 
  EPX73351.1 117 NTLDNLDDILKYAIEHQEVATAQFWSSMIKSYIDLNLYDKASLIADMALSHIEYLHND 174
                 56678889*******************************9998888888888888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (482 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       637  (0.035529); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.44
# Mc/sec: 3291.60
//
Query:       EPX73352.1  [L=349]
Description: DNA-directed RNA polymerase I and III subunit Rpc40 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.7e-28   98.1   0.0    9.2e-28   96.9   0.0    1.7  2  RNA_pol_A_bac  RNA polymerase Rpb3/RpoA insert domain
      2e-19   68.8   0.0    3.7e-19   67.9   0.0    1.5  1  RNA_pol_L      RNA polymerase Rpb3/Rpb11 dimerisation domain


Domain annotation for each model (and alignments):
>> RNA_pol_A_bac  RNA polymerase Rpb3/RpoA insert domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       1.5   1.3e+04      51      69 ..       7      25 ..       3      27 .. 0.76
   2 !   96.9   0.0     1e-31   9.2e-28       2     112 .]      89     226 ..      88     226 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 1.5
                   EEEEEEEEESSECEEGGGC CS
  RNA_pol_A_bac 51 svelkLnvkgpgevtagdl 69
                    +e++++ +  ++vt+ d+
     EPX73352.1  7 RTEVSIQSDRVKDVTSTDF 25
                   5678888888888999987 PP

  == domain 2  score: 96.9 bits;  conditional E-value: 1e-31
                    EEEECTSSS.HHHHHCHHHCSTCBSSCHHHHHHHHCTT-ETSSSSTTCSEEEEEEEEESSEC..................EEGGGCBES....... CS
  RNA_pol_A_bac   2 eieentsvlqDEvvaHrlgliplvsedvleillnlkelveeeeegeeeksvelkLnvkgpge..................vtagdlkle....... 72 
                    +i++nts++qDEv++Hr+gl+p++++++++   + + +  +e+++++ ++v+++L++k++ +                  v ++dl ++       
     EPX73352.1  89 YIINNTSIIQDEVLSHRIGLLPIKADPDMF-KWFQRPIPGQEATHTDYDTVVFSLSKKCEFNkeaaadekdpkklyvnseVLSSDLIWKpqgrqee 183
                    899************************999.344444433799***************************************************** PP

                    ...SSSCEESSTTSEEEEEETT-EEEEEEEEEEESSEECTTT- CS
  RNA_pol_A_bac  73 ...dadveivnpdilIakLrkgqeleleakvkkGiGkehakfs 112
                       ++ +++vnp+i++akLr+gqe++lea+++ G+G++hakfs
     EPX73352.1 184 rfaESPIRVVNPNIVVAKLRPGQEIDLEAHAVLGVGQDHAKFS 226
                    ******************************************8 PP

>> RNA_pol_L  RNA polymerase Rpb3/Rpb11 dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.9   0.0   4.1e-23   3.7e-19       1      69 []      58     334 ..      58     334 .. 0.82

  Alignments for each domain:
  == domain 1  score: 67.9 bits;  conditional E-value: 4.1e-23
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..................................................................... RF
   RNA_pol_L   1 efllrgvdhtlgNaLRrillsevpgvaiea..................................................................... 30 
                 +f+++gvd++++Na+Rril++e+p+va+e                                                                      
  EPX73352.1  58 TFEISGVDASIANAFRRILIAEIPTVAFEFtyiinntsiiqdevlshrigllpikadpdmfkwfqrpipgqeathtdydtvvfslskkcefnkeaaade 156
                 69*******************************************************999999999999999999999999999999999999999999 PP

                 ................................................................................xx................. RF
   RNA_pol_L  31 ................................................................................pv................. 32 
                                                                                                 p+                 
  EPX73352.1 157 kdpkklyvnsevlssdliwkpqgrqeerfaespirvvnpnivvaklrpgqeidleahavlgvgqdhakfspvatasyrllPTihilspiegedavkfqk 255
                 999999998888888888888888888888888888888877777777777777777777777777777766555555550055555556666666666 PP

                 ..........................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   RNA_pol_L  33 ..........................................vkvntdkdklilevetdgslkPeealkeAlkiLkekl 69 
                                                           v++ +++d++  +ve++g ++P+ ++++++ +Lk+k+
  EPX73352.1 256 cfpagvidledgpdgkkrarvadvrkdtvsreclrhpefadkVQLGRVRDHFLYSVESTGIMTPDVLFLKSVAVLKSKC 334
                 6666677777777777777777777777777777777777668888********************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (349 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       276  (0.0153941); expected 358.6 (0.02)
Passed bias filter:                      253  (0.0141112); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 2519.25
//
Query:       EPX73353.1  [L=476]
Description: UDP-N-acetylglucosamine diphosphorylase Uap1/Qri1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.6e-46  157.7   0.0    4.4e-46  157.4   0.0    1.0  1  UDPGP         UTP--glucose-1-phosphate uridylyltransferase
     0.0085   16.5   0.0      0.024   15.0   0.0    1.7  2  NTP_transf_3  MobA-like NTP transferase domain


Domain annotation for each model (and alignments):
>> UDPGP  UTP--glucose-1-phosphate uridylyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.4   0.0   4.9e-50   4.4e-46       5     341 ..      52     416 ..      48     445 .. 0.91

  Alignments for each domain:
  == domain 1  score: 157.4 bits;  conditional E-value: 4.9e-50
       UDPGP   5 kklferyleekskqekidwdkieplpeeevvdyedlkekeeekkellnklavlkLnGglGtsmGckgpKslieVr..dgktfLdlivqqie........ 93 
                  ++fe+ +e+++k++k+  ++++p+p  +++d +    +   ++    ++a l L+Gg+Gt++G + pK+ +++    +kt+++l++ +i+        
  EPX73353.1  52 LTKFENAIEHSQKRSKLTPSDVSPVPIISTIDESWY--NMGLEEISKGRVAALVLAGGQGTRLGSNDPKGCFNIGlpGNKTLFELQALKIQraeylaqe 148
                 678999999999999999999999999999888776..33444445589*************************9999************999999998 PP

       UDPGP  94 .elnkkynvdvPlvlmnSfnTdedtekilk..kykk.kkvdiltfnqsryPriskesllpvekkakkeekeewyPpGhGdlyesLknsglldkllaeGk 188
                  +  +k   +v ++ m S  T++ t +++k  +y++ +k++i++f+q+++P ++ +  + +e++ +     + +P G+G++ye+L+++g l+++ ++G+
  EPX73353.1 149 aYPMHKQSAKVVWYVMVSDATKDITLSFFKknNYFGiQKERIFFFEQGKLPCLDVQGRILLESDYT----VSQAPNGNGGVYEALQRTGALEHMKQSGI 243
                 877889999*********************8889999*************************9996....788************************** PP

       UDPGP 189 eyiFvsniDN.lgatvDlkilnllvekkaeflmevtektradvkgGtlieyegklrlleiaqvpkehveefksvk..kfkifntnni...winlkalkr 281
                  ++  +++DN l+  vD+ +++++ ek+ + +m+v+ek  a++++G +++++ +  ++e++++ +e+    +sv+  ++  + + ni   +++l++l++
  EPX73353.1 244 VHVTAYSVDNvLALPVDPIFIGMVREKGYQVAMKVVEKKVAEERVGLVVSQNAHPSVVEYSEISEEASRATESVDgkTCLRLRAANIayhYFSLDFLEH 342
                 **********88889***************************************************999999997214556788999999********* PP

       UDPGP 282 lv.eekelkleiivnk.ktld.egekviqletavgaaiksF..........kkavginVpR.srflpvkttsdl 341
                 +  + + l ++++ +k  ++d ++++ ++   ++g +++ F          +k+ +++V+R + f+p+k+++d+
  EPX73353.1 343 MShNARYLPVHLALKKiPYYDiTQHQFFKPSSPNGYKLEMFifdsfeqipiEKFGCLQVSRdTSFSPLKNSQDA 416
                 **55599*****99998999998999***********************************889*******994 PP

>> NTP_transf_3  MobA-like NTP transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   2.7e-06     0.024       1      32 [.     101     137 ..     101     165 .. 0.86
   2 ?   -2.1   0.0      0.49   4.4e+03      29      99 ..     249     264 ..     223     298 .. 0.70

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 2.7e-06
                   EEEEEESS-TTTTT..THHHHCC...CCCCHHHHHHH CS
  NTP_transf_3   1 aviLAGGrSsRmgg..dKallpl...ggkpllervld 32 
                   a++LAGG+++R+g+  +K   ++   g+k+l+e ++ 
    EPX73353.1 101 ALVLAGGQGTRLGSndPKGCFNIglpGNKTLFELQAL 137
                   79***********9899*9999988888888876655 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.49
                   HHHHHHCTT.-CEEEEECSHCHHHHHHTTCTS-EEE-TTSS-SHHHHHHHHHHHH.SSSCEEEEETT-TT- CS
  NTP_transf_3  29 rvldalraagvdevvvvggdeevlaalarlgvrvvededpgkgplaslaaalraaadadavlvlacDmPll 99 
                   +                                                       + d vl l++D +++
    EPX73353.1 249 Y-------------------------------------------------------SVDNVLALPVDPIFI 264
                   3.......................................................455566666665544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (476 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       501  (0.0279436); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 3195.32
//
Query:       EPX73354.1  [L=223]
Description: TIM23 translocase complex subunit Tim21 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-38  130.8   0.0    4.2e-38  130.5   0.0    1.1  1  TIM21     TIM21


Domain annotation for each model (and alignments):
>> TIM21  TIM21
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.5   0.0   2.3e-42   4.2e-38       1     144 [.      62     199 ..      62     200 .. 0.98

  Alignments for each domain:
  == domain 1  score: 130.5 bits;  conditional E-value: 2.3e-42
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHHHHHHHHHHHHHHH-HHHHHHT----EEEC-ECCSSSSCCC--SEEEEEE-TTSSEEEEEE CS
       TIM21   1 kvkeatkntlsliivlagvgvtglvlYlilselfspsgdtkifnrAlekveedeevrevlgerlkayGeetrrdrWtRnrpivstreldkeGkehlrmk 99 
                 k++++++n+ +l+iv++g gv+gl++Y+++++l+  sg++++ ++A++++++++e+++v+g+++ka Ge++++ r  R++ i+++r +d++G+ehl+++
  EPX73354.1  62 KAYRTSANFGNLSIVVFGGGVFGLIVYALVTSLW--SGEAHYGDEAFDLLKNNPECQYVFGDEMKAIGEASHPLR--RTHGILTSRVWDHKGIEHLVLQ 156
                 788999****************************..9**************************************..********************** PP

                 EEEE-SS-EEEEEEEEEE-SS-SS-EEEEEEEEETTCEEEEEE-- CS
       TIM21 100 Fhvegkrkkgtvklelkesdesgklefrylyvdvpgekriyledn 144
                 Fh+ g+ +kg+v  +l ++ +  ++ ++ylyvdv+++ +i+l+d+
  EPX73354.1 157 FHLIGNGHKGHVFGRLANNGK--DYVWEYLYVDVANYGNIILFDK 199
                 *******************95..999****************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (223 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       322  (0.0179597); expected 358.6 (0.02)
Passed bias filter:                      293  (0.0163422); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1610.36
//
Query:       EPX73355.1  [L=141]
Description: NADPH-hemoprotein reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.4e-20   71.3   0.1    7.5e-20   70.9   0.1    1.2  1  Cyt-b5    Cytochrome b5-like Heme/Steroid binding domain
  ------ inclusion threshold ------
      0.044   13.0   0.4      0.051   12.8   0.4    1.1  1  DUF4886   Domain of unknown function (DUF4886)
      0.079   13.0   0.0       0.13   12.3   0.0    1.3  1  LysM      LysM domain
       0.28    9.4   0.4        0.4    8.8   0.2    1.3  2  COG6      Conserved oligomeric complex COG6


Domain annotation for each model (and alignments):
>> Cyt-b5  Cytochrome b5-like Heme/Steroid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.9   0.1   1.7e-23   7.5e-20       1      73 [.      67     138 ..      67     139 .. 0.97

  Alignments for each domain:
  == domain 1  score: 70.9 bits;  conditional E-value: 1.7e-23
                 EHHHHTTTECTTEEEEEETTEEEECTTTCCCSTTCSHHHHTTTTSBBHHHHHHTTGGCHHHHHHHHGGEEEEE CS
      Cyt-b5   1 tleelskhngkndlwvairgkVYDvskflskhpGgesailkyaGkDateafksvvhsekdaekllkkylvGkl 73 
                 t+eel+khn+k+d+w+a+rgkVY+v+ ++ +hp g++ i k+ G Dat+   +  h + + e++l++++vG l
  EPX73355.1  67 TMEELKKHNTKDDCWIAVRGKVYNVTAYAPYHPDGAKKIFKHSGIDATKQYMKA-HADVNEEEMLRTCYVGPL 138
                 789***************************************************.999999**********87 PP

>> DUF4886  Domain of unknown function (DUF4886)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.4   1.1e-05     0.051      62     153 ..      26     119 ..      11     132 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.1e-05
     DUF4886  62 vdgkktetkkvsleealkdekWDvvtlqqasglsgayetyepylkeLvdyvkkkapnkka..klvlhqtwA.YakdskhkgfknyekdqeeMYna 153
                 +++k++++kk++ +   ++ekWD   +   ++lsg+ e ++ +++eL ++  k+     +  k++   ++A Y+ d ++k fk+ + d ++ Y +
  EPX73355.1  26 KQTKRKSKKKQKNDPGCTQEKWDAL-VESGENLSGVAEPFKVTMEELKKHNTKDDCWIAVrgKVYNVTAYApYHPDGAKKIFKHSGIDATKQYMK 119
                 567788888889999********97.68999****************998665543333400444444444467888888888888888777765 PP

>> LysM  LysM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   2.9e-05      0.13       3      29 ..      51      77 ..      50      88 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 2.9e-05
                E-TT--HHHHHHHCTCHHHHHHHHCTC CS
        LysM  3 VkkGDTLwsIAkrygitveklleaNnl 29
                V +G+ L+++A  +++t+e+l++ N  
  EPX73355.1 51 VESGENLSGVAEPFKVTMEELKKHNTK 77
                89*********************9954 PP

>> COG6  Conserved oligomeric complex COG6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.2     9e-05       0.4     269     331 ..       4      70 ..       2      78 .. 0.64
   2 ?   -3.4   0.0      0.45     2e+03     508     533 ..     103     128 ..     101     132 .. 0.72

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 9e-05
        COG6 269 llesLfkfqe..gdeiakglqaknkeeleslkkeeeeeefdeelnkll..drilegvcrplkvRvEq 331
                 +l+sLf+ qe  ++e+a++  +k+ +   ++k++++   ++e+   l+   ++l+gv++p+kv +E 
  EPX73355.1   4 FLKSLFSKQEatKEEPARAGGEKQTKRKSKKKQKNDPGCTQEKWDALVesGENLSGVAEPFKVTMEE 70 
                 89****99889877777776655555533332222222222234445511689**********9987 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 0.45
        COG6 508 selleksgLsdllnllnmiqpeedes 533
                 ++++++sg++   ++++ + + ++e+
  EPX73355.1 103 KKIFKHSGIDATKQYMKAHADVNEEE 128
                 67888888888888888887665444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1131  (0.0630822); expected 358.6 (0.02)
Passed bias filter:                      591  (0.0329634); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1038.17
//
Query:       EPX73356.1  [L=737]
Description: transcription factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-10   40.9   0.4    2.4e-10   40.0   0.4    1.5  1  LisH      LisH


Domain annotation for each model (and alignments):
>> LisH  LisH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.0   0.4   1.4e-14   2.4e-10       2      27 .]      35      60 ..      34      60 .. 0.96

  Alignments for each domain:
  == domain 1  score: 40.0 bits;  conditional E-value: 1.4e-14
                HHHHHHHHHHHHCT-HHHHHHHHHHT CS
        LisH  2 eLNrLIydYLvkeGyeetAeaFekEa 27
                +LN++IydYLvk++y+e+A+aF++Ea
  EPX73356.1 35 LLNSYIYDYLVKKNYWEAAQAFGQEA 60
                7************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (737 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       767  (0.0427799); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.29s 00:00:00.90 Elapsed: 00:00:00.46
# Mc/sec: 4866.50
//
Query:       EPX73357.1  [L=143]
Description: hsp16-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-21   75.4   0.9    3.9e-21   75.1   0.9    1.1  1  HSP20       Hsp20/alpha crystallin family
    2.1e-12   46.4   0.0    3.6e-12   45.7   0.0    1.4  1  ArsA_HSP20  HSP20-like domain found in ArsA
     0.0023   18.9   0.3     0.0073   17.3   0.3    1.8  1  CS          CS domain
     0.0081   16.6   0.0       0.01   16.2   0.0    1.3  1  PIH1_CS     PIH1 CS-like domain
  ------ inclusion threshold ------
       0.12   12.6   0.0       0.14   12.4   0.0    1.2  1  Cohesin     Cohesin domain


Domain annotation for each model (and alignments):
>> HSP20  Hsp20/alpha crystallin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.1   0.9   1.1e-24   3.9e-21       1     102 []      40     143 .]      40     143 .] 0.92

  Alignments for each domain:
  == domain 1  score: 75.1 bits;  conditional E-value: 1.1e-24
                 E--SSEEEEEEEEE-TT--CCCEEEEEETTEEEEEEE--......---TT----SS---EEEEEE--STTB-TTT-EEEEETTEEEEEEEBSS--..-- CS
       HSP20   1 dikeeeeefevkldvpglkkeelkvkvednrvlvkgehe....eeeedekglikerssrkFsrkftLPenvdadkvkaslkdGvLtvtvpkkepekkkk 95 
                 d++e ++  ev +++pg+kk++++v++++++++++ge      +e ++++  ++er+ ++Fsr++t+P+ vdad+++a+++ G+L++ +pk e+   ++
  EPX73357.1  40 DVHEGKDTVEVDVELPGVKKQDVQVHYDEGKLTISGESVnerkSESDKGNQRWSERRFGSFSRTITIPNRVDADRIEAQFNHGILSIVLPKIEES--RS 136
                 67899*******************************98866656666778899**************************************9998..78 PP

                 ------- CS
       HSP20  96 erkiqiq 102
                 +rki+i+
  EPX73357.1 137 KRKIAIN 143
                 9999995 PP

>> ArsA_HSP20  HSP20-like domain found in ArsA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.7   0.0   9.9e-16   3.6e-12       2      62 ..      46     127 ..      45     128 .. 0.97

  Alignments for each domain:
  == domain 1  score: 45.7 bits;  conditional E-value: 9.9e-16
  ArsA_HSP20   2 deyvlkldLPfvdkeeidlsrsgdeLtIkig......................nfrRqitLPsvlarkevtsAkfedgvLeIr 62 
                 d ++++++LP+v+k++++++ ++  LtI+ +                      +f+R+it P++++++++  A+f+ g L I 
  EPX73357.1  46 DTVEVDVELPGVKKQDVQVHYDEGKLTISGEsvnerksesdkgnqrwserrfgSFSRTITIPNRVDADRI-EAQFNHGILSIV 127
                 7899******************************************************************.**********97 PP

>> CS  CS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.3     2e-06    0.0073       6      76 .]      42     130 ..      37     130 .. 0.77

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 2e-06
                 EEETTEEEEEEE-TTCTTTTTCEEEEEETTEEEEEE...TS.CEEEEECE................BSS-BETTTEEEEEETTEEEEEEEB CS
          CS   6 yQtldeVvvtiyvkkvnikkkdvkvefkerslkvki...gk.eklliege................LfgpIdpeesswtieskkveitLkK 76 
                 ++ +d+V+v +++++v  kk+dv+v+  e +l+++    ++ +++ ++g+                  + +d +     +    + i+L K
  EPX73357.1  42 HEGKDTVEVDVELPGV--KKQDVQVHYDEGKLTISGesvNErKSESDKGNqrwserrfgsfsrtitIPNRVDADRIEAQFNHGILSIVLPK 130
                 67789**********9..*************999986665556666666588888888887777777777777777777777777777766 PP

>> PIH1_CS  PIH1 CS-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   2.9e-06      0.01      32      87 ..      47     121 ..      19     131 .. 0.87

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 2.9e-06
     PIH1_CS  32 elaieielPllksikevklrvgerrlel....................eskk.akyfLslkLpYpvdedkveAkFvk 87 
                 +  +++elP++   ++v+++++e +l +                    e ++  ++  ++++p +vd d++eA+F++
  EPX73357.1  47 TVEVDVELPGV-KKQDVQVHYDEGKLTIsgesvnerksesdkgnqrwsE-RRfGSFSRTITIPNRVDADRIEAQFNH 121
                 56799******.6799999999999999***************999744.336999999****************97 PP

>> Cohesin  Cohesin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0     4e-05      0.14      14      58 ..      46      83 ..      39     132 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 4e-05
                SEEEEEEEEESECTTEEEEEEEEEE.TTTEEEEEEEE-TTS.SSGG CS
     Cohesin 14 dtvtvpvtvsnvskkvaaaqftikYDpavlevvsvkaGsiv.knss 58
                dtv+v v++ +v+k    ++++++YD  +l+++    G+ v + +s
  EPX73357.1 46 DTVEVDVELPGVKK----QDVQVHYDEGKLTIS----GESVnERKS 83
                89************....***************....555432222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       392  (0.021864); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 1003.33
//
Query:       EPX73358.1  [L=180]
Description: hypothetical protein SOCG_01108 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       892  (0.0497518); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.30s 00:00:00.75 Elapsed: 00:00:00.46
# Mc/sec: 1180.88
//
Query:       EPX73359.1  [L=227]
Description: hypothetical protein SOCG_01109 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.48    9.9   4.7       0.55    9.7   4.7    1.3  1  Stevor    Subtelomeric Variable Open Reading frame
       0.62    8.9   5.9        0.8    8.5   5.9    1.1  1  EcsB      Bacterial ABC transporter protein EcsB


Domain annotation for each model (and alignments):
>> Stevor  Subtelomeric Variable Open Reading frame
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   4.7   6.1e-05      0.55     184     259 ..     114     186 ..      12     188 .. 0.73

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 6.1e-05
      Stevor 184 aealkklasslsilnlfsesslesalkaavsaaaasdlagtaasaassafepygiaalvllilavvliiLYiwlyr 259
                 +++ + ++s l+il++  e   e+     ++ +++++++  + +a ++ +   g+ a+vl++lav+ i L++ l r
  EPX73359.1 114 SSIGSICTSLLAILYICPEWYREA---GRATKKCIKKFTPAVCKALITLISLNGVGAMVLVVLAVLNICLFVLLIR 186
                 445566777777777776655554...6677888888888889999999999********************9977 PP

>> EcsB  Bacterial ABC transporter protein EcsB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   5.9     9e-05       0.8     100     206 ..      83     187 ..      69     191 .. 0.69

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 9e-05
        EcsB 100 ryslllqllllllvllillPlllettglsiaelllllllllllkl.lnlllkweelrlqgk.kkrridrlirlllnalllylllalapllalllillll 196
                 + +++++++++++v++  + l+      ++ +l    ++ ++ +l + l++  e++r  g+ +k+ i++++  +++al+  ++l++  +++l+++++l 
  EPX73359.1  83 IITIIYNIVFIAIVFGYNVSLYS----NTFYGLAGSSIGSICTSLlAILYICPEWYREAGRaTKKCIKKFTPAVCKALITLISLNGVGAMVLVVLAVLN 177
                 34455555555555555555555....555555555555555555344555555555555514556777999*********************999999 PP

        EcsB 197 lvlllllkrk 206
                 ++l++ll+r+
  EPX73359.1 178 ICLFVLLIRN 187
                 9999999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       896  (0.0499749); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 1537.89
//
Query:       EPX73360.1  [L=67]
Description: hypothetical protein SOCG_01110 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       185  (0.0103185); expected 358.6 (0.02)
Passed bias filter:                      163  (0.00909142); expected 358.6 (0.02)
Passed Vit filter:                         6  (0.000334653); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.42
# Mc/sec: 479.29
//
Query:       EPX73361.1  [L=341]
Description: splicing factor Spf38 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.7e-33  113.4  11.5     0.0001   23.0   0.0    7.3  7  WD40            WD domain, G-beta repeat
    1.6e-11   44.3   0.5    0.00043   20.5   0.1    4.6  5  ANAPC4_WD40     Anaphase-promoting complex subunit 4 WD40 dom
      3e-05   22.9   1.3     0.0069   15.1   0.1    2.5  2  Nup160          Nucleoporin Nup120/160
    0.00016   20.8   0.5       0.69    8.8   0.0    3.8  3  Ge1_WD40        WD40 region of Ge1, enhancer of mRNA-decappin
     0.0089   16.3   0.5        4.4    7.6   0.1    2.8  2  Glyco_hyd_101C  Glycosyl hydrolase 101 beta sandwich domain
  ------ inclusion threshold ------
       0.17   11.8   0.0       0.34   10.8   0.0    1.4  1  XET_C           Xyloglucan endo-transglycosylase (XET) C-term


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   1.4e-05     0.043       9      38 .]      48      78 ..      41      78 .. 0.78
   2 !   15.5   0.1   8.3e-06     0.025       4      38 .]      86     121 ..      84     121 .. 0.88
   3 !   23.0   0.0   3.5e-08    0.0001       1      38 []     125     164 ..     125     164 .. 0.78
   4 !    8.1   0.0    0.0017       5.1       3      38 .]     170     205 ..     168     205 .. 0.85
   5 !   19.6   0.0   4.1e-07    0.0012       3      36 ..     211     245 ..     209     247 .. 0.88
   6 !   13.3   0.3   4.1e-05      0.12       5      38 .]     259     297 ..     255     297 .. 0.76
   7 !   20.7   0.0   1.8e-07   0.00054       3      34 ..     303     335 ..     301     337 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.4e-05
                SSSS...EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  9 GHss...vtslafspdgawlasGsdDgtvriWd 38
                GHss   v+  +f+ +g+ +asG++D+ + +W+
  EPX73361.1 48 GHSSevlVS--RFDTSGSKFASGGMDRQILLWN 78
                894454445..46999****************8 PP

  == domain 2  score: 15.5 bits;  conditional E-value: 8.3e-06
                 EEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 
                  ++l+G  + +t+l++s+dg  l  ++s D +++ W+
  EPX73361.1  86 FGILSGAkGAITDLQWSRDGEVLYnACS-DTNLYSWN 121
                 6789999555*************98889.*******8 PP

  == domain 3  score: 23.0 bits;  conditional E-value: 3.5e-08
                 TEEEEEEESSSS.EEEEEEETTSSEEEEE.ETTSEEEEEE CS
        WD40   1 gqclrtltGHss.vtslafspdgawlasG.sdDgtvriWd 38 
                 gq++r+++GH + v++l++ + g+ l+++ sdD t+++Wd
  EPX73361.1 125 GQKIRKYKGHAGvVNALDVLRVGSELLASvSDDSTLKVWD 164
                 6899******6657***85555666554449********9 PP

  == domain 4  score: 8.1 bits;  conditional E-value: 0.0017
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 c++++ G  ++ t++a s+ g+ + +G+  g ++ Wd
  EPX73361.1 170 CIQSI-GEkFPLTAVAISQQGTTVYTGGIEGVIKAWD 205
                 66665.554669************************9 PP

  == domain 5  score: 19.6 bits;  conditional E-value: 4.1e-07
                 EEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEE CS
        WD40   3 clrtltGHss.vtslafspdgawlasGsdDgtvri 36 
                  l+tlt H++ +tsl+ s+dg+ l+s s+D tvr 
  EPX73361.1 211 VLYTLTEHNDiITSLSLSKDGSTLLSNSMDSTVRT 245
                 6899****8857*************8899****95 PP

  == domain 6  score: 13.3 bits;  conditional E-value: 4.1e-05
                 EEEESSSSEEEEE.......EETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGHssvtsla.......fspdgawlasGsdDgtvriWd 38 
                  +++G   v++l        +s d +++a+Gs D++ ++W+
  EPX73361.1 259 SVYSGA--VHGLEhnllgaaWSGDTRLIAAGSSDRNTYVWS 297
                 556665..666666666666***********99*******5 PP

  == domain 7  score: 20.7 bits;  conditional E-value: 1.8e-07
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtv 34 
                 + + l GH ++v++++f+p ++ ++s+s D+t 
  EPX73361.1 303 LKYQLPGHeGCVNHVDFHPTQNIILSCSSDKTM 335
                 556789**888**************9988*995 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.1   1.4e-07   0.00043      32      81 ..      79     136 ..      32     145 .. 0.70
   2 ?    1.7   0.0      0.11   3.3e+02      51      76 ..     149     174 ..     137     188 .. 0.85
   3 ?    4.1   0.0     0.019        58      17      86 ..     158     224 ..     148     226 .. 0.65
   4 !    7.1   0.0    0.0022       6.6      30      68 ..     213     249 ..     197     262 .. 0.85
   5 !    9.4   0.0   0.00042       1.3      37      88 ..     268     318 ..     255     324 .. 0.82

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 1.4e-07
  ANAPC4_WD40  32 l........eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  +          ++ ++ +++L+W+ dg++L  a+sd+++   + +sg+ +++++ ++ 
   EPX73361.1  79 VfgevsnfgILSGAKGAITDLQWSRDGEVLYNACSDTNLYSWNTNSGQKIRKYKGHAG 136
                  24445555544678899*********************************99987766 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.11
  ANAPC4_WD40  51 klLavaysdgevrlldaesgkvvhsl 76 
                  +lLa + +d+++++ d+ s ++++s+
   EPX73361.1 149 ELLASVSDDSTLKVWDSRSRDCIQSI 174
                  789999999*********99999887 PP

  == domain 3  score: 4.1 bits;  conditional E-value: 0.019
  ANAPC4_WD40  17 gellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtc 86 
                  + l v     +   +  + +e+   +++a +++g+    +  +g ++  d  + +v+ +l+ +++  +t+
   EPX73361.1 158 STLKVWDSRSRDCIQ--SIGEKFPLTAVAISQQGTTVYTGGIEGVIKAWDLRTNEVLYTLTEHND-IITS 224
                  444444333333222..246777788888888899999999999999999999999998888877.4665 PP

  == domain 4  score: 7.1 bits;  conditional E-value: 0.0022
  ANAPC4_WD40  30 wtleedkedsevrsLaWkpdgklLavaysdgevrlldae 68 
                  +tl  ++++  ++sL+ ++dg+ L     d++vr +d++
   EPX73361.1 213 YTL--TEHNDIITSLSLSKDGSTLLSNSMDSTVRTFDVK 249
                  333..678889************************9986 PP

  == domain 5  score: 9.4 bits;  conditional E-value: 0.00042
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclg 88 
                   +++  + aW+ d +l+a + sd +  + +++sg++  +l+ ++  +v+ ++
   EPX73361.1 268 LEHNLLGAAWSGDTRLIAAGSSDRNTYVWSSSSGELKYQLPGHEG-CVNHVD 318
                  555666779***************************999998877.677665 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.1   2.3e-06    0.0069     163     256 ..      89     174 ..      81     177 .. 0.71
   2 !    6.1   0.1    0.0012       3.6     222     259 ..     182     219 ..     179     246 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 2.3e-06
                 EEETTS-EEEEEEETTEEEEEEEEE-------B--TTTT.TSS--SS---TT-ECEEEEET.....TTTEEEEEETT-EEEEEETTTTEEEEEE CS
      Nup160 163 vsladggllklkrdedggawkesvfepksfllslsgllglladpsrrksgasvalsldvavavveigqtylfalsrdgkLrvWnlltgkclati 256
                 +s a g+++ l++  dg+  +  + +   + +          +  r+++g      +  a +v ++g+ +l+++s d +L+vW+ ++  c+ +i
  EPX73361.1  89 LSGAKGAITDLQWSRDGEVLYNACSDTNLYSWNTNSG-----QKIRKYKGHA---GVVNALDVLRVGSELLASVSDDSTLKVWDSRSRDCIQSI 174
                 5666777777777666776677666666664443333.....3356666666...44444567888**********************999885 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0012
                 ET.....TTTEEEEEETT-EEEEEETTTTEEEEE.EE-- CS
      Nup160 222 avavveigqtylfalsrdgkLrvWnlltgkclat.idll 259
                 ava+++ + t++++    g++++W+l+t+ +l+t  + +
  EPX73361.1 182 AVAISQ-QGTTVYTGGIEGVIKAWDLRTNEVLYTlTEHN 219
                 677787.9999999999****************966655 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.4   0.1    0.0026       7.7     189     283 ..      95     174 ..      10     188 .. 0.63
   2 !    4.1   0.1    0.0061        18     176     215 ..     166     205 ..     154     211 .. 0.64
   3 !    8.8   0.0   0.00023      0.69     179     217 ..     210     249 ..     201     259 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0026
    Ge1_WD40 189 liveaafspdGtalatasedGevkffqvyledeeeprCLheWkPhdGkslssllfldnhkeesdeqfWrfaitgadnnselklWscelWtClqti 283
                  i++  +s dG +l  a++d  +     y  ++++ + + ++k h+G     +  ld ++  s       ++++ +++s lk+W + +  C+q i
  EPX73361.1  95 AITDLQWSRDGEVLYNACSDTNL-----YSWNTNSGQKIRKYKGHAGV----VNALDVLRVGS------ELLASVSDDSTLKVWDSRSRDCIQSI 174
                 46667777777777777777653.....44444445555556666653....12233333333......24556667778888888888888877 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.0061
    Ge1_WD40 176 eieegllkieehsliveaafspdGtalatasedGevkffq 215
                 + ++ +  i e+  ++  a+s  Gt++ t   +G++k + 
  EPX73361.1 166 RSRDCIQSIGEKFPLTAVAISQQGTTVYTGGIEGVIKAWD 205
                 4444555566666677777888888888888888888776 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.00023
    Ge1_WD40 179 egllkieehs.liveaafspdGtalatasedGevkffqvy 217
                 e+l  ++eh   i++ ++s dG +l   s+d +v+ f v 
  EPX73361.1 210 EVLYTLTEHNdIITSLSLSKDGSTLLSNSMDSTVRTFDVK 249
                 4566677776589999*********************985 PP

>> Glyco_hyd_101C  Glycosyl hydrolase 101 beta sandwich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.9   0.1    0.0049        15      65      92 ..      99     126 ..      87     139 .. 0.87
   2 !    7.6   0.1    0.0015       4.4      43      99 ..     251     309 ..     180     320 .. 0.75

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0049
                     EEE-B-TTS-B--GGG-EEEEEESS-SE CS
  Glyco_hyd_101C  65 lPWnadatgkkekadeeklYhynpkggt 92 
                     l W+ d ++  ++ ++  lY +n+++g+
      EPX73361.1  99 LQWSRDGEVLYNACSDTNLYSWNTNSGQ 126
                     67999999999999999********997 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0015
                     GGGG-EEEEETTEEEEETTEEEEEE-B-T..TS-B--GGG-EEEEEESS-SEEEEE--H CS
  Glyco_hyd_101C  43 eayrertitlngktvlkgesyLlPWnada..tgkkekadeeklYhynpkggtstwkLpe 99 
                      a ++r+i++    v   e+ Ll   +       ++ +++   Y +++++g+ +++Lp 
      EPX73361.1 251 FAPSNRHISVYSGAVHGLEHNLLGAAWSGdtRLIAAGSSDRNTYVWSSSSGELKYQLPG 309
                     567888999888888888999987555551044445556669***************97 PP

>> XET_C  Xyloglucan endo-transglycosylase (XET) C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00011      0.34      18      39 ..      97     118 ..      93     122 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00011
       XET_C  18 ralrwvrknymiYdYCtDtkRf 39 
                  +l+w r++ ++Y+ C+Dt+ +
  EPX73361.1  97 TDLQWSRDGEVLYNACSDTNLY 118
                 689****************966 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (341 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       269  (0.0150036); expected 358.6 (0.02)
Passed bias filter:                      246  (0.0137208); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.54u 0.30s 00:00:00.84 Elapsed: 00:00:00.46
# Mc/sec: 2212.86
//
Query:       EPX73362.1  [L=351]
Description: U1 snRNP-associated protein Usp109 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.2e-25   87.7   0.0    9.1e-10   38.2   0.0    3.3  3  RRM_1         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
    8.2e-06   25.8   0.0     0.0037   17.3   0.0    3.1  3  Limkain-b1    Limkain b1
      0.001   19.2   0.0      0.035   14.3   0.0    2.2  2  RRM_8         RRM-like domain
  ------ inclusion threshold ------
       0.02   14.5   0.0       0.15   11.6   0.0    2.1  2  RRM_5         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
      0.029   14.1   0.0      0.084   12.6   0.0    1.7  2  Calcipressin  Calcipressin


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   0.0   2.5e-05     0.089      11      69 ..       2      60 ..       1      61 [. 0.81
   2 !   33.3   0.0   8.7e-12   3.1e-08       1      62 [.      76     136 ..      76     143 .. 0.92
   3 !   38.2   0.0   2.5e-13   9.1e-10       1      69 [.     179     240 ..     179     241 .. 0.97

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 2.5e-05
                SHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTT.EEETTEEE CS
       RRM_1 11 teeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealng.kklggrel 69
                +ee++k lF++      ++ + d e     +++ VeF s+e+A++Al  l g k++ g+++
  EPX73362.1  2 DEEQVKLLFNNTPIS--VTYYQDsESYALLRTCRVEFSSPEAATDALTILSGqKTISGSPI 60
                677777777776544..777888888888899********************888888766 PP

  == domain 2  score: 33.3 bits;  conditional E-value: 8.7e-12
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngk 62 
                 lf++n+ p+v e+e+k+lF+ +G + s+++ r  + +s+  afV  +++e Ae+A  +++g 
  EPX73362.1  76 LFITNIDPEVAENEVKQLFQTYGCV-SARVLRCMDSSSTSLAFVWLNNSEGAERAHVEMQGA 136
                 8************************.777777789************************995 PP

  == domain 3  score: 38.2 bits;  conditional E-value: 2.5e-13
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 +fV+ L+p ++ e+L+ +F++ G+i + ++++       gfa ++F ++ +Ae+Al+++n+  + g+++
  EPX73362.1 179 IFVSELSPLINSETLRSYFEHLGEILHTQVYS-------GFAKINFVQRHSAERALNEMNNFPILGQRI 240
                 8*******************************.......9**********************9999887 PP

>> Limkain-b1  Limkain b1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.21   7.5e+02      43      62 ..      31      50 ..      26      61 .. 0.83
   2 ?    3.7   0.0     0.018        64      23      63 ..      88     135 ..      74     154 .. 0.66
   3 !   17.3   0.0     1e-06    0.0037      26      76 ..     194     245 ..     185     251 .. 0.80

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.21
  Limkain-b1 43 savlrfanqeaaeralkrle 62
                +  + f+++eaa  al  l 
  EPX73362.1 31 TCRVEFSSPEAATDALTILS 50
                66799*******99987665 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.018
  Limkain-b1  23 nrLrrLsdncG...Gkvlsisgks....avlrfanqeaaeralkrlen 63 
                 n +++L++  G    +vl  +++s    a +  +n e aera   +++
  EPX73362.1  88 NEVKQLFQTYGcvsARVLRCMDSSstslAFVWLNNSEGAERAHVEMQG 135
                 55566666554222577766544321125566689*******998876 PP

  == domain 3  score: 17.3 bits;  conditional E-value: 1e-06
  Limkain-b1  26 rrLsdncGGkv.lsisgksavlrfanqeaaeralkrleneDvfGnritvsek 76 
                 r  ++  G     +++ + a ++f ++ +aeral  ++n  + G+ri +s +
  EPX73362.1 194 RSYFEHLGEILhTQVYSGFAKINFVQRHSAERALNEMNNFPILGQRIQLSWS 245
                 5555555543313588999******************************977 PP

>> RRM_8  RRM-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   9.8e-06     0.035      24      72 ..      85     135 ..      74     140 .. 0.81
   2 ?    2.5   0.0     0.048   1.7e+02      35      72 ..     199     232 ..     174     243 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 9.8e-06
       RRM_8  24 vtsevLhqvYdaYGavavqvLav..stwqvealvsflsshDaerarsathg 72 
                 v+++ ++q +++YG v+ +vL    s+ +  a v+   s  aera++  +g
  EPX73362.1  85 VAENEVKQLFQTYGCVSARVLRCmdSSSTSLAFVWLNNSEGAERAHVEMQG 135
                 6777789**************752244556799************988776 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.048
       RRM_8  35 aYGavavqvLavstwqvealvsflsshDaerarsathg 72 
                   G    ++L ++ ++  a + f+ +h aera    ++
  EPX73362.1 199 HLG----EILHTQVYSGFAKINFVQRHSAERALNEMNN 232
                 443....6899999999999***********9877665 PP

>> RRM_5  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.13   4.7e+02      29      87 ..      76     136 ..      69     159 .. 0.72
   2 ?   11.6   0.0   4.3e-05      0.15      64     104 ..     210     250 ..     154     258 .. 0.78

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.13
       RRM_5  29 llVyglepdkvnldklFnlfclYgnv.erv.kflkt.kketalvqmgdasaveravqHLnna 87 
                 l++++++p+ v  +++  lf  Yg v +rv + + +     a+v + ++  +era   +++a
  EPX73362.1  76 LFITNIDPE-VAENEVKQLFQTYGCVsARVlRCMDSsSTSLAFVWLNNSEGAERAHVEMQGA 136
                 566777775.5567888999999999446624565414456888888888888887777765 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 4.3e-05
       RRM_5  64 ketalvqmgdasaveravqHLnnaklfgkrlevalSKqqav 104
                  + a ++  +  ++era++ +nn ++ g+r+++  S+  ++
  EPX73362.1 210 SGFAKINFVQRHSAERALNEMNNFPILGQRIQLSWSRPPSM 250
                 5677788888999*********************9987665 PP

>> Calcipressin  Calcipressin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0      0.84     3e+03      35      52 ..      32      49 ..      25      60 .. 0.77
   2 ?   12.6   0.0   2.3e-05     0.084       9      69 ..     189     245 ..     170     260 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.84
  Calcipressin 35 iivvfsseeaaaavrsql 52
                   +v fss+eaa ++ + l
    EPX73362.1 32 CRVEFSSPEAATDALTIL 49
                  6899******99987655 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 2.3e-05
  Calcipressin   9 nlellralieqtdeilawsllksFrRiivvfsseeaaaavrsqldwekeeilGkklrlYfa 69 
                   n e+lr+++e+ +eil+ ++  +F +  ++f + ++a+++ ++ +  +  ilG++++l + 
    EPX73362.1 189 NSETLRSYFEHLGEILHTQVYSGFAK--INFVQRHSAERALNEMN--NFPILGQRIQLSWS 245
                   559*********************76..69***********9966..89999999988665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (351 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       334  (0.018629); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 2400.30
//
Query:       EPX73363.1  [L=656]
Description: hypothetical protein SOCG_01113 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.7e-17   62.7   4.0    7.7e-17   61.2   4.0    1.7  1  Fungal_trans  Fungal specific transcription factor domain
    2.7e-08   33.8  10.1    6.4e-08   32.6  10.1    1.6  1  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain
  ------ inclusion threshold ------
        2.8    8.1   6.1         22    5.2   3.2    2.8  2  Spt4          Spt4/RpoE2 zinc finger


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.2   4.0   1.3e-20   7.7e-17      10     266 ..     260     484 ..     254     485 .. 0.80

  Alignments for each domain:
  == domain 1  score: 61.2 bits;  conditional E-value: 1.3e-20
  Fungal_trans  10 pqfpilhkpsflpkt..ssenssksayaspllllailalGalfsesetkesnssltsesqefiafplraeilihedfsspssslwilqsLlllelye 104
                     fpi++  +f++ +   ++n ++s+ +++  +++++a+G+++++ + +                + +a  ++  + s+  +s+++l  Ll+l l++
    EPX73363.1 260 ISFPIINLKNFSDLFitIYDNGPSSNTYQQYEANMCFAIGSSLMGRDCSDY--------------FWKAIHFL--SKSKHLYSFEHLRELLYLGLFS 340
                   456888888888877777788888888888888888888888888777653..............33555555..4444445688888888888887 PP

  Fungal_trans 105 ktssdralher..hhgvavrlarslgLhrnpsyvgkkslwklweeeaesrrRlwwaaFylDktialklGrppllddsqinlpLPcddddlwesddas 199
                   +  s  ++ e   ++    ++a  lgLhr++ y         +   +e +rR++w+ + lD++ia+ lGrp+ ++ds+i++ ++ +  d+ es++ +
    EPX73363.1 341 MLES-VPGLESygIIRKIGTIAIALGLHRESTYTTC----GIPSSLKELMRRCFWSFYALDRIIASSLGRPVSISDSSIDVKMFSSTTDVKESLSFA 432
                   6666.4555554555555557*************94....477777**************************99*********************** PP

  Fungal_trans 200 eetlvetklsneeksrkiasfllaLkkilskiagsllsiekqlqqrdlqseklswveeleraldnWr 266
                     +  +       ++ + +  ++ L +++s+++ +l+      ++ ++q        +l+++ld+W+
    EPX73363.1 433 DLNATG-------WNLELSVHIINLRRFTSDVLNELYQAHDNNEEGVQQ--------RLHSRLDEWK 484
                   *****9.......99*******************777766666666666........9999999996 PP

>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.6  10.1   1.1e-11   6.4e-08       1      31 [.      56      86 ..      56      91 .. 0.94

  Alignments for each domain:
  == domain 1  score: 32.6 bits;  conditional E-value: 1.1e-11
                SS-HHHHHCT---STSSSS-HHHHHCTHHHC CS
     Zn_clus  1 haCdnCrkkKvKCdakkPaCsnCkklnleCt 31
                +aC++C+ +++KCda++P+Cs+C k + +C 
  EPX73363.1 56 RACTRCHVRRTKCDARRPSCSSCLKAGRNCI 86
                69****************************8 PP

>> Spt4  Spt4/RpoE2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   3.2    0.0037        22       1      39 [.      55      85 ..      55     115 .. 0.71
   2 ?    2.3   0.0      0.03   1.8e+02      40      60 ..     605     625 ..     594     635 .. 0.79

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.0037
        Spt4  1 lrACllCklvktedqFeeegCpnCeilelkgdkekvsec 39
                lrAC++C++ +t+ + ++  C  C  l+       + +c
  EPX73363.1 55 LRACTRCHVRRTKCDARRPSCSSC--LK------AGRNC 85
                69*********999999*******..43......44444 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.03
        Spt4  40 tseefeGlvaildpekSwvAk 60 
                   ++  G++ail+  +Swv  
  EPX73363.1 605 NRKSIAGVIAILERLQSWVSG 625
                 556778************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (656 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       761  (0.0424452); expected 358.6 (0.02)
Passed bias filter:                      519  (0.0289475); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.64u 0.33s 00:00:00.97 Elapsed: 00:00:00.47
# Mc/sec: 4224.80
//
Query:       EPX73364.1  [L=585]
Description: general amino acid permease GAP1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   1.2e-125  419.8  43.1   1.5e-125  419.5  43.1    1.0  1  AA_permease    Amino acid permease
    4.3e-33  114.8  44.4    5.7e-33  114.4  44.4    1.1  1  AA_permease_2  Amino acid permease


Domain annotation for each model (and alignments):
>> AA_permease  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  419.5  43.1  1.7e-129  1.5e-125       1     474 [.      88     541 ..      88     544 .. 0.98

  Alignments for each domain:
  == domain 1  score: 419.5 bits;  conditional E-value: 1.7e-129
  AA_permease   1 hvlvialggviGtglfvglgvvlsqaGplgallayllagvviflvmlslgeiatngpksggfytyasrflgpelGfviGlnylfswitvlaleltaas 98 
                  h+++ia+gg+iGtg++vg+g  l+++G++++l+ y+l+g+ +f+++++lge+++++p  g++ t a+rf+++++Gf+ + ny + ++t ++lelt+  
   EPX73364.1  88 HIQMIAIGGAIGTGVWVGSGESLASGGGASVLINYILVGTLVFFTVYNLGELSVAYPTRGSYITHATRFIDESWGFALSCNYAMGFLTSIPLELTTGT 185
                  9************************************************************************************************* PP

  AA_permease  99 iliqfwelvtdlpkawvtgavflvvlliinlvgvkvygeaefilalikiiaiiafiivgiillaggkpnkgagfrflgdngsifknnlppgfakeeeg 196
                  +l+ +w   tdl+   ++++vf+++l++in++gv+vyge+ef+++ ik+ a+++fii+gii+++gg  +++   r +     + +n + +g       
   EPX73364.1 186 MLMRYW---TDLN-SGIWITVFITFLIFINMFGVRVYGEIEFFMSTIKVAAMVGFIILGIIINCGGVSTDH---RGYIGTELFRENAFRNG------- 269
                  ******...9999.9********************************************************...66666666688889999....... PP

  AA_permease 197 afknfisvfvivvfaftGielvaiiagEvkdPeksiPkailqvviritifYvlsllligllvprndlgllndsasaaspfvifikesgvsvlaplina 294
                   fk+f+svf  ++f+f+ +e v+++a+E+++P+k+ Pka++q+++ritifY+lsl++++ll++ +d  l++ s + aspfv++ik +++++l++++na
   EPX73364.1 270 -FKGFCSVFTKAAFSFSCTECVGVAAAETDNPAKAFPKAVRQTFFRITIFYILSLFVVSLLISGSDSRLTSFSGVNASPFVLAIKDANIKALPSVLNA 366
                  .**********************************************************************888889********************* PP

  AA_permease 295 viltaalssansslysasRvlyslakdglaPkvlkkvskrgvPlraillsmiisllalllaslnlaapivfnfllaisaliglivwlliilsylrfRk 392
                  vil+++lssan+++y++sR+++sl ++g  Pk++++v+++g+P+ ++ll +++  l++l++  ++   +vfn+ll++s+l ++++w++i+l+y+r+R 
   EPX73364.1 367 VILISVLSSANAMVYAGSRAIHSLGCNGFVPKCFSWVDRSGRPITSLLLIFLFMPLGYLVETGKST--TVFNWLLSLSGLGTFFTWGSINLAYIRYRS 462
                  **********************************************************99999999..****************************** PP

  AA_permease 393 alkyqgrsieelgfkaallplgvilvlaaliiillilalyayltvkkgpkdwgaasfaaaylivllfliilvgvklhvknkr 474
                  a+k q+rs++++gf++++++  +++++ ++++il++ +++ + ++ + p   +a+sf+  yl++++fl+++ ++k+++++++
   EPX73364.1 463 AMKHQQRSLSQIGFRSPFGIVAAWYAFGFICLILIAEFYVSVSPLNGKP---SASSFFMNYLSAVIFLLFFTVHKVIYRTPI 541
                  ********************************************99999...99************************9875 PP

>> AA_permease_2  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.4  44.4   6.4e-37   5.7e-33       8     423 ..      91     526 ..      85     530 .. 0.84

  Alignments for each domain:
  == domain 1  score: 114.4 bits;  conditional E-value: 6.4e-37
  AA_permease_2   8 alvigsvigsgifvkn..laasggpalilwvwiavligslavllvyaElssalprsgGiyvytkaafgkkvaflsawfnwfayvpvlasilsvaas 101
                    +++ig +ig+g+ v +  ++asgg a++l+  i v+ +++  ++ + Els a p++g  ++ + +++ + ++f  ++ ++++++ ++++ l+ ++ 
     EPX73364.1  91 MIAIGGAIGTGVWVGSgeSLASGGGASVLINYILVGTLVFFTVYNLGELSVAYPTRGSYITHATRFIDESWGFALSCNYAMGFLTSIPLELTTGTM 186
                    689***********999*8889888877777777777777899999****99***********************************998887777 PP

  AA_permease_2 102 yllnalgpdlqgntwltyliaiaililvalinirgikesakiqnilgilkillpliiliilglitvdgggfssl......stetdtffpngwpgvl 191
                     + +++  dl+     + + + ++++++++in +g++ ++ i +++ ++k+   ++ +iilg+i+ +gg ++++          ++ f ng +g+ 
     EPX73364.1 187 LMRYWT--DLN-----SGIWITVFITFLIFINMFGVRVYGEIEFFMSTIKV-AAMVGFIILGIIINCGGVSTDHrgyigtELFRENAFRNGFKGFC 274
                    666655..453.....334456779999***********************.59999999************999888775555579********* PP

  AA_permease_2 192 lgllivlwsfdGfesaanvsee..vkkkdvpkaifigllivlvlyllvniaflgvvpd.dei.anlsnlgs.vaalffeavggkvvaiivvilial 282
                    ++++ +++sf+  e++ + + e  ++ k +pka    +  ++++y+l  +++   ++  d+  ++ s+++  ++ l  + ++ k++ ++++++i +
     EPX73364.1 275 SVFTKAAFSFSCTECVGVAAAEtdNPAKAFPKAVRQTFFRITIFYILSLFVVSLLISGsDSRlTSFSGVNAsPFVLAIKDANIKALPSVLNAVILI 370
                    **********************5455599******************9988666555414435777776522567777777789************ PP

  AA_permease_2 283 sllgaintavigssrvlealardgvlPrffakvnkfgspiraiiltaivslillllfllassaaynfllsvsslgliisyllliigalilrkkrph 378
                    s+l ++n+ v++ sr +++l+  g+ P+ f+ v++ g+pi ++ l++++  + +l+ ++ s++ +n+lls+s lg ++ ++ + ++++ +r  ++h
     EPX73364.1 371 SVLSSANAMVYAGSRAIHSLGCNGFVPKCFSWVDRSGRPITSLLLIFLFMPLGYLVETGKSTTVFNWLLSLSGLGTFFTWGSINLAYIRYRSAMKH 466
                    *************************************************999988888888*********************************** PP

  AA_permease_2 379 lkr.........pgkilvaiigalfllfllvalffppkgp....a..tqssliytiiltv 423
                    ++r         p  i+ a+ ++ f++++l+a f++++ p        ++ ++y+ +++ 
     EPX73364.1 467 QQRslsqigfrsPFGIVAAWYAFGFICLILIAEFYVSVSPlngkPsaSSFFMNYLSAVIF 526
                    *99999977666444777777777777777777755444422223225555888844333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (585 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       682  (0.0380389); expected 358.6 (0.02)
Passed bias filter:                      302  (0.0168442); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.44
# Mc/sec: 3960.55
//
Query:       EPX73365.1  [L=316]
Description: hypothetical protein SOCG_01115 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.14   12.0   0.3       0.14   12.0   0.3    1.9  2  SPC25     Microsomal signal peptidase 25 kDa subunit (SPC25)


Domain annotation for each model (and alignments):
>> SPC25  Microsomal signal peptidase 25 kDa subunit (SPC25)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.3   7.6e-06      0.14      21      77 ..      31      87 ..      23     101 .. 0.83
   2 ?   -1.8   0.3      0.13   2.3e+03      64      88 ..     182     206 ..     159     235 .. 0.65

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 7.6e-06
       SPC25 21 eshtltdvrLalGylavaiaavaflydykveFeeskpvlaiavvlYfilsgiltlys 77
                 ++t+  v +a+Gy+  +i +++f+y+   +F  s+  +++   +Y i  +  t+  
  EPX73365.1 31 TKFTHFFVTIAVGYVYAIINLLSFYYSDRGPFFVSNESQIAFWGIYSIALISSTALR 87
                6799999**************************************999877666655 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.13
       SPC25  64 vlYfilsgiltlystfvekntifvg 88 
                  l+f  +g+l+  ++++ + ++fv 
  EPX73365.1 182 PLFFSYMGLLFPLKWLISSPNFFVL 206
                 3466666666666666666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (316 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       795  (0.0443416); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2199.05
//
Query:       EPX73366.1  [L=326]
Description: acetyl esterase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      1e-54  185.6   0.0    1.3e-54  185.3   0.0    1.1  1  Abhydrolase_3  alpha/beta hydrolase fold
    1.8e-05   23.8   0.0    2.5e-05   23.3   0.0    1.1  1  Say1_Mug180    Steryl acetyl hydrolase
  ------ inclusion threshold ------
      0.015   14.2   0.1        3.2    6.5   0.0    2.1  2  COesterase     Carboxylesterase family
      0.019   14.4   0.0       0.06   12.8   0.0    1.7  2  Peptidase_S9   Prolyl oligopeptidase family
       0.19   11.5   0.0       0.91    9.3   0.0    1.9  2  Abhydrolase_2  Phospholipase/Carboxylesterase


Domain annotation for each model (and alignments):
>> Abhydrolase_3  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  185.3   0.0   3.5e-58   1.3e-54       1     210 [.      94     300 ..      94     301 .. 0.95

  Alignments for each domain:
  == domain 1  score: 185.3 bits;  conditional E-value: 3.5e-58
                    EEEE--STTTS--TTTTHHHHHHHHHHHTSEEEEEE---TTTS-TTHHHHHHHHHHHHHHHTHHHHTETTCEEEEEEETHHHHHHHHHHHHHHHTT CS
  Abhydrolase_3   1 lvyfHGGGfvlgsldthdalcrelakelgavvvsvdYrlAPehpfPaavedalaalrwlaeqawelgadpsrivlaGdSaGGnlaaavalrardeg 96 
                    lvy+HGGG+++g+ld+ d+ +r +++ +g++v++vdY+lAPe+++P++++++  ++rwl+++a++ g+d++ri+++GdSaGGn++  +++++r+eg
     EPX73366.1  94 LVYLHGGGYTVGTLDQFDNAMRIFSEISGCQVYNVDYKLAPEYKWPTQMNEGEYVVRWLFKNAKDRGVDEKRIAIGGDSAGGNMTCSITQKLRNEG 189
                    79************************************************************99******************************** PP

                    ---EEEEEEESE-SSTSSTTSHHHHHCHHTTTSSSSCHHHHHHHHHHHSSGGGGGSTTTSGGGCS-SST---EEEEEETT-TTHHHHHHHHHHHHH CS
  Abhydrolase_3  97 epkvagqvliyPvtdlertesesikkaeeladgplltraaldlfwrlylpeadrddplaspllaedlsglpptlvvvaefDplrdegeayaerlra 192
                    +pkva q+ iyP t++ ++e+++   ++++ + ++ t+  +  +w l  p  d ++p++ pl a+d+s+lp++lv+  +fD+lrd + +ya++l+a
     EPX73366.1 190 GPKVALQIPIYPETKM-PFETKAA-VENRVGE-YVETAGVFSFLWHLLPPSVDYTQPYVTPLNAKDFSNLPRALVINDGFDMLRDVAHEYARKLAA 282
                    ************9988.7766666.3444455.89999999999999999********************************************** PP

                    TT--EEEEEETTEETTGG CS
  Abhydrolase_3 193 agvevelieyegmvHgfa 210
                    ag++  +i  ++++Hgf+
     EPX73366.1 283 AGNDLVYIYNDDLPHGFI 300
                    *****************7 PP

>> Say1_Mug180  Steryl acetyl hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.0     7e-09   2.5e-05     119     228 ..      88     194 ..      78     213 .. 0.78

  Alignments for each domain:
  == domain 1  score: 23.3 bits;  conditional E-value: 7e-09
  Say1_Mug180 119 PkvDpvllylHGGgfalklipvtlvfLsnlrklfpdm...ailvsDYtvtaakdqskkYplqvleslavydylvksk...gf..knvvvlGdSaGGnl 208
                  P     l+ylHGGg+ ++    tl    n  + f+++    +  +DY +       +k+p q+ e   v  +l k     g+  k + + GdSaGGn+
   EPX73366.1  88 PAHGAALVYLHGGGYTVG----TLDQFDNAMRIFSEIsgcQVYNVDYKLAP----EYKWPTQMNEGEYVVRWLFKNAkdrGVdeKRIAIGGDSAGGNM 177
                  5566789*******9876....788899999****9955556777777766....9********99999888876531224433789*********** PP

  Say1_Mug180 209 vLslllklsklnkvvlPkka 228
                    s+  kl++ +    Pk a
   EPX73366.1 178 TCSITQKLRNEGG---PKVA 194
                  ****999988443...6555 PP

>> COesterase  Carboxylesterase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0    0.0017         6     107     126 ..      93     112 ..      78     134 .. 0.78
   2 ?    6.5   0.0   0.00089       3.2     170     204 ..     149     183 ..     147     195 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0017
                 EEEEE--STTTS-BGCGS-T CS
  COesterase 107 VlVwihGggfqtgsaseydg 126
                  lV++hGgg+++g+  ++d 
  EPX73366.1  93 ALVYLHGGGYTVGTLDQFDN 112
                 69************999875 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.00089
                 HHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHH CS
  COesterase 170 LrWVkenIasFGGdpervtlfGesAGaasvsllll 204
                 +rW+ +n +  G d +r+ + G+sAG+ + +  ++
  EPX73366.1 149 VRWLFKNAKDRGVDEKRIAIGGDSAGGNMTCSITQ 183
                 69*************************99887665 PP

>> Peptidase_S9  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   1.7e-05      0.06      56      83 ..     156     183 ..     139     188 .. 0.81
   2 ?   -1.8   0.0      0.51   1.8e+03     164     190 ..     275     301 ..     268     325 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.7e-05
                   HHTTS--GGGEEEEEETHHHHHHHHHHH CS
  Peptidase_S9  56 akegyvdserlaitGgSyGGyltgaaln 83 
                   ak   vd++r+ai G S+GG +t  +  
    EPX73366.1 156 AKDRGVDEKRIAIGGDSAGGNMTCSITQ 183
                   444579*****************88765 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.51
                   HHHHHHH--S-SEEEEEETTS-SSTTS CS
  Peptidase_S9 164 klvaaLqkkgknvlllifpdegHgvgk 190
                   +++++L  +g+++ + ++ d  Hg+ +
    EPX73366.1 275 EYARKLAAAGNDLVYIYNDDLPHGFIQ 301
                   688999999999999999999997643 PP

>> Abhydrolase_2  Phospholipase/Carboxylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1      0.33   1.2e+03       9      26 ..      86     103 ..      82     120 .. 0.75
   2 ?    9.3   0.0   0.00025      0.91      94     129 ..     153     188 ..     132     214 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.33
                    -SS---EEEEEE--TT-- CS
  Abhydrolase_2   9 pkdkaqavviflHGlGds 26 
                    p+ ++ a++++lHG G +
     EPX73366.1  86 PGPAHGAALVYLHGGGYT 103
                    55668899******8866 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00025
                    HHHHHHTT--GGGEEEEEETHHHHHHHHHHHT-SS- CS
  Abhydrolase_2  94 idaelkkgipssriiigGFSqGaalalylaltlpkk 129
                     ++  + g++++ri+igG S G+ ++   + +l+++
     EPX73366.1 153 FKNAKDRGVDEKRIAIGGDSAGGNMTCSITQKLRNE 188
                    44555677*****************99888777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (326 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       386  (0.0215294); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2318.40
//
Query:       EPX73367.1  [L=347]
Description: fructose-1,6-bisphosphatase Fbp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-67  226.9   0.3      2e-67  226.4   0.3    1.3  1  FBPase      Fructose-1-6-bisphosphatase, N-terminal domain
  ------ inclusion threshold ------
      0.011   15.3   0.0      0.017   14.7   0.0    1.2  1  Inositol_P  Inositol monophosphatase family


Domain annotation for each model (and alignments):
>> FBPase  Fructose-1-6-bisphosphatase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  226.4   0.3   2.2e-71     2e-67      14     188 ..      39     211 ..      14     212 .. 0.90

  Alignments for each domain:
  == domain 1  score: 226.4 bits;  conditional E-value: 2.2e-71
      FBPase  14 eanatgeltallsalklalkiisskvrkaelvnllGlagaeNvtGdeqkklDvladeiliealkaseevkvlvSEEeeelivlerekegkyvvafDPlD 112
                  ++a+gel+ ll++l++a+k+i++++rkaelvnl+Gl+g  N+tGdeqk+lD + ++i+i+a+k+++ + v+vSEEee+ i +   ++g+y++ +DP+D
  EPX73367.1  39 IREAKGELSLLLNSLQFAFKFIANNIRKAELVNLIGLSGVINSTGDEQKQLDSICNDIFIQAMKTNGCIRVIVSEEEEKEILV--DSSGSYAITCDPID 135
                 3467788***********************************************************************99999..999*********** PP

      FBPase 113 GSSnidtnvsvGtifsiyrkksedeetti.dvlqpGkeqvAAgyvvYGsstmlVltlgaGvngFtlDpslgefiltk 188
                 GSSnid++vsvGtif+iy+ +  +++++  dvl++G+e+vAAgy++YG+s++l lt+g+ vngFtlD++lgefilt+
  EPX73367.1 136 GSSNIDAGVSVGTIFGIYKIR-PGSQGSLqDVLRSGNEMVAAGYTMYGASAHLLLTTGHKVNGFTLDTNLGEFILTH 211
                 *******************44.55555555*********************************************98 PP

>> Inositol_P  Inositol monophosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   1.9e-06     0.017      37      98 ..      80     139 ..      50     151 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.9e-06
                 CHHHHHHHHHHHHHHHHHHHHHHHHSTTSEEEHHCHHHHCCCT.SSSSSEEEEEEEEETHHH CS
  Inositol_P  37 egeedlvtaadeaveelilealaekfpshkilgeetlakgekseltedgltwivDPiDGTkn 98 
                 ++  d ++++d  +++++++a++++    +i++ee+ +++   + ++ ++ +  DPiDG +n
  EPX73367.1  80 NSTGDEQKQLDSICNDIFIQAMKTNGCIRVIVSEEEEKEIL--VDSSGSYAITCDPIDGSSN 139
                 567899*******************************9999..55666688********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (347 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       373  (0.0208043); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.32s 00:00:00.92 Elapsed: 00:00:00.54
# Mc/sec: 1942.84
//
Query:       EPX73368.1  [L=305]
Description: enhancer-RNA-mediated silencing [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.9e-63  214.6   0.0    2.2e-63  214.4   0.0    1.0  1  PhzC-PhzF     Phenazine biosynthesis-like protein
    2.7e-05   23.4   0.0    3.8e-05   22.9   0.0    1.2  1  Pro_racemase  Proline racemase


Domain annotation for each model (and alignments):
>> PhzC-PhzF  Phenazine biosynthesis-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  214.4   0.0   2.4e-67   2.2e-63       1     283 []       9     301 ..       9     301 .. 0.89

  Alignments for each domain:
  == domain 1  score: 214.4 bits;  conditional E-value: 2.4e-67
                 EEET-SSTTSSEEEEEEESTTCS-HHHHHHHHHHHTSSEEEEEE--SSTTSSEEEEEE-SSSEES--HHHHHHHHHHHHHHCT-.S-SCEEEEEETTEE CS
   PhzC-PhzF   1 vdaFtespfkGNpaaVvldadelddeelqsiAaelnlseTaFllkpsdekarfrlRyFTPvaEvdlcGHatlasahalaekglv.asaetveletkaGi 98 
                 vd+F +  f+GNp+aVv++ad+l+ e++q+ A ++nlseT+F+lkp+  +a++rlR+FTP +E++++GH+t++s ha +e      ++ +v++e+ aG 
  EPX73368.1   9 VDVFSKGGFNGNPVAVVFNADDLSSEQMQKFAIWTNLSETTFVLKPTVPEADYRLRIFTPGNELPFAGHPTIGSSHAAIESAVCvPKNGKVVQECGAGL 107
                 8*************************************************************************999888765548999********** PP

                 EEE.EEEEETCEECCEEEEE-SEEEEEE-HHHHHHHHHHCCTSGG....-TTS-BEEEESSSEEEEEEBSTCCHHHH----HHHHHHHCT-EEEEEEEE CS
   PhzC-PhzF  99 lpvkslkekddgeellielkfPvikteevssedlallakllklaa....qkalpiavkstglekvivplsseeavaelspdlaeeikkcpkkgvivtaa 193
                 +p++ + +++d+ e + el+  v++ +  +++++a+l+ l + ++     ++  +++   g++++ v+l+s+++v +l pd    +k c+++g + ++ 
  EPX73368.1 108 VPITLTRGENDDIEYAFELSN-VTSSQISDEAAVAILNCLFDVKDhiqeRGKWNPVLMDAGPKWLTVELQSANQVLDLIPDYGTMAKLCKEYGYTGVYV 205
                 ***999999999999988875.44444445666677777777676888888999****************************99999999999998876 PP

                 .TTTSSCCEEEEEEEEGGGTEEEESS-HHHHHHHHHHHHHCC-S......SSEEEEEEEE-GGGT--EEEEEEEE.E-TTCEEEEEEEE-EEEEEEE CS
   PhzC-PhzF 194 .aeagskkdfhsRmFaPklGivEDpvtGsAsgaLaaylseklnl......eesakikieqgqalgrsgtlevevevkvdkekervkvtGkAvtvmeg 283
                   +++ +++++sR+FaP++G+ EDp++Gs+++a + y s  +n+        + k+ i+qg ++gr+ +l v+    + +  + vkv G A+t ++g
  EPX73368.1 206 fGKHHGDTHYESRAFAPAIGVLEDPACGSGAAACGMYASLFNNKdgelgnASNGKLRISQGCKVGRQANLSVQTF-MNSDGYSTVKVGGSATTCITG 301
                 15667899*******************************999998887665677899**************8885.56789************9876 PP

>> Pro_racemase  Proline racemase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.0   4.3e-09   3.8e-05      56     149 ..      48     141 ..      43     184 .. 0.83

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 4.3e-09
                   EEEEE--SSTTSSEEEEEEESSSB-SSTHHHHHHHHHHHHHTTSS-SEEEECEEEEEETTEEEEEEEECTST..SEEEEEEE-S-BEEEEEEEEEE CS
  Pro_racemase  56 gallvppkepdadlgvifletsgylpmcGsntigvvtvlletGlvevqepetklsletpaGlvevtaecrdg..kvervslenvpsfvyaldveve 149
                   + +++ p+ p+ad+ + ++ + + lp +G+ tig + +++e+ +  +++   k++ e+ aGlv +t++  ++       +l+nv s     +++v 
    EPX73368.1  48 TTFVLKPTVPEADYRLRIFTPGNELPFAGHPTIGSSHAAIESAVCVPKNG--KVVQECGAGLVPITLTRGENddIEYAFELSNVTSSQISDEAAVA 141
                   678999***********************************987766655..5999*********9986544324456789999988777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (305 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       386  (0.0215294); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.49
# Mc/sec: 1885.16
//
Query:       EPX73369.1  [L=90]
Description: hypothetical protein SOCG_01119 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       510  (0.0284455); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 632.10
//
Query:       EPX73370.1  [L=587]
Description: hypothetical protein SOCG_01120 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-77  260.3   2.4    4.1e-77  259.9   2.4    1.1  1  DUF3808     Protein of unknown function (DUF3808)
  ------ inclusion threshold ------
      0.032   14.4   2.6        3.3    7.9   0.0    3.4  4  Ku_PK_bind  Ku C terminal domain like
      0.082   12.1   0.0       0.15   11.3   0.0    1.3  1  XendoU      Endoribonuclease XendoU


Domain annotation for each model (and alignments):
>> DUF3808  Protein of unknown function (DUF3808)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  259.9   2.4   6.9e-81   4.1e-77       5     475 ..      40     497 ..      36     499 .. 0.90

  Alignments for each domain:
  == domain 1  score: 259.9 bits;  conditional E-value: 6.9e-81
     DUF3808   5 dlvLndkfeeaeellkeaskeSslhalgrgviafleAvltfepekmkkAsealkeaeklceksrkkaqkneskqnlssdslyepgleaevcyaealLlk 103
                 d v+nd+ +  + +l+   ++S  +   ++   f+ A l++ep+ ++ A + ++ +e+  e+ rk  + ++    +     y+pg e +v+y+   L+ 
  EPX73370.1  40 DCVINDDYKTLKPKLE---EDSIEMDTLESSQNFYVALLGLEPKVVHLARDIIERTEQRFEELRKTVEDTS---DT--CGNYPPGSEVQVIYSLLSLMD 130
                 7788899888888885...677889999*********************************9999988888...33..478****************** PP

     DUF3808 104 AlLtflseslvefiKgglklRkaYqiykeilkeikklekkkrskteeeeesllseeknsqaeideflesGvnlgfGilqlviSllPpailklLsvvGFs 202
                  +L+f+s sl+e++K+ ++lR++++ ++++l+ ++k++++k+s +++ +++            de +esG   g+Gil++++S++P++ +k++s++ F+
  EPX73370.1 131 TVLGFMSGSLLESMKATYRLRTTHSSFSKLLENVRKVKQEKESGIKNVKNN-------ADMFLDEIVESGAMAGYGILNFLVSMFPSSYSKVISFICFN 222
                 **************************************9999986666666.......34599************************************ PP

     DUF3808 203 GdreeGLrlLweasksrnlraalallaLlfYytgvvqvldiddg.lkapleeleelLlksrkrfPksalwllfearieslkgnldeAlelleeiieesq 300
                  +r+e+L+ Lw+++ ++n  +a++l+++ ++y +++++ +i++   + +l++le+++++ ++r+ ks lw l+e +i  l+ n  +A+++ ++ +   +
  EPX73370.1 223 PNRNEALEGLWKSAMYNNALGAISLVTIFTFYGMIQPIASISPPyYNSELRRLENQIQNCKARYRKSLLWQLMELKISLLTENPWNAIKIGNQTV---T 318
                 *****************************************6446899********************************************766...8 PP

     DUF3808 301 selkqvkhlclfelaltlvylheykeaaesfleLlklskwSkalYtYlaaacllelgre..........ekkaeakekaeelfkevpkllqkkagkslp 389
                    +q+  l  f+ a+++++ +++k aa++fl L + ++w + l ++la++c+l++ +e          e +a  ++ a  l++ ++ l +k ++  lp
  EPX73370.1 319 ATAQQLINLQGFDMAMACICVRDFKIAAKQFLILEESNDWFRGLNRFLAGCCMLQHANElekiknadpkEYNAFIEDGADLLVNSLSVLQEKDRKSLLP 417
                 999***************************************************************99666666656666666666666666566778* PP

     DUF3808 390 lekFilrKverfkarkkekkselldavlvspvlEliYvwngfsrmskeeleeesvkkleekaankeseeeeDdellkkLLkglvlr 475
                 +ekF +rK+ +++ ++k+++++l  ++ v+p+l ++Y +  ++   ++ +e + + +l e ++     +ee+d++l+++L++++ r
  EPX73370.1 418 MEKFSIRKILKWERKAKTENKPLYKVISVPPYLQFLYAFVVCTLGFHKYSE-SYKRDLLEVTC-----YEENDSALRDFLLAVIER 497
                 ***************9999999999***************99875555555.44455544433.....4779***********987 PP

>> Ku_PK_bind  Ku C terminal domain like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1      0.74   4.4e+03      84     116 ..     154     183 ..     139     187 .. 0.44
   2 ?    7.9   0.0   0.00055       3.3      61     105 ..     263     307 ..     257     322 .. 0.76
   3 ?    4.6   0.0    0.0058        34      57      79 ..     380     402 ..     370     432 .. 0.76
   4 ?   -2.5   0.0      0.91   5.4e+03      67      88 ..     506     528 ..     485     532 .. 0.65

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.74
  Ku_PK_bind  84 rrefWkelvkkeklglIskdeaessdvteeeAk 116
                 +++f    + ++ +  +++++ ++++  +++A+
  EPX73370.1 154 HSSFS--KLLEN-VRKVKQEKESGIKNVKNNAD 183
                 33333..12222.34455555555555555555 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.00055
  Ku_PK_bind  61 eepelyNdFlrdlkkklqs.eggdrrefWkelvkkeklglIskdea 105
                   p  yN+ lr l++++q+ + + r+++ +  +++ k++l +++  
  EPX73370.1 263 ISPPYYNSELRRLENQIQNcKARYRKSLLW-QLMELKISLLTENPW 307
                 57889*************988666666554.577777999998655 PP

  == domain 3  score: 4.6 bits;  conditional E-value: 0.0058
  Ku_PK_bind  57 aieeeepelyNdFlrdlkkklqs 79 
                  i++ +p+ yN+F++d  + l +
  EPX73370.1 380 KIKNADPKEYNAFIEDGADLLVN 402
                 58999**********87666654 PP

  == domain 4  score: -2.5 bits;  conditional E-value: 0.91
  Ku_PK_bind  67 NdFlrdlkkklqs.eggdrrefW 88 
                 N+ lr+l +  q+ ++  +++fW
  EPX73370.1 506 NARLRKLLQLNQAsSSTGDNDFW 528
                 66677777666664477888898 PP

>> XendoU  Endoribonuclease XendoU
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   2.4e-05      0.15      44     103 ..     138     197 ..     106     218 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 2.4e-05
      XendoU  44 kplfskvneeklkkptyaafiaLldnYeadtgvaeevteeerkeeeafLdaileTkvmke 103
                  +l+++++     ++t + f +Ll+n  +  +++e+  ++ ++  + fLd+i+e+  m  
  EPX73370.1 138 GSLLESMKATYRLRTTHSSFSKLLENVRKVKQEKESGIKNVKNNADMFLDEIVESGAMAG 197
                 567777777777889***************************************999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (587 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       852  (0.0475208); expected 358.6 (0.02)
Passed bias filter:                      559  (0.0311785); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.61u 0.29s 00:00:00.89 Elapsed: 00:00:00.46
# Mc/sec: 3843.06
//
Query:       EPX73371.1  [L=338]
Description: alpha-1,2-galactosyltransferase Gmh1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      4e-74  249.4   0.4      5e-74  249.0   0.4    1.1  1  Glyco_transf_34  galactosyl transferase GMA12/MNN10 family
  ------ inclusion threshold ------
      0.026   14.5   0.0      0.043   13.8   0.0    1.4  1  Nucleotid_trans  Nucleotide-diphospho-sugar transferase


Domain annotation for each model (and alignments):
>> Glyco_transf_34  galactosyl transferase GMA12/MNN10 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  249.0   0.4   5.6e-78     5e-74       2     238 ..      93     326 ..      92     327 .. 0.97

  Alignments for each domain:
  == domain 1  score: 249.0 bits;  conditional E-value: 5.6e-78
  Glyco_transf_34   2 epeivlllvsnekkcenssgdhelllkvikNrvdYaekhgyeifykkvsallaeemnsvWaklpairaamkkyPeaewiWwlDqdAlimnmdls 95 
                      ++eivlll+sn ++    s d +++++v+ Nr++Y + h+y++++++++ ++    ++vW k+p + ++m+kyP+a+wiWwlDqdAlimn + s
       EPX73371.1  93 SHEIVLLLGSNGNTG---SFDPSIMDDVFANRLQYVKEHNYNFEFVDLNGINM---PAVWGKMPSVIQMMEKYPTAKWIWWLDQDALIMNNSQS 180
                      79**********997...59999**********************88888766...************************************** PP

  Glyco_transf_34  96 leehvlkperLeelllkntpv......vplrryketnlvedgedvlviisqdwnglnagsflirnsewsklllDlwadpllrekkkavtesdeq 183
                      l++ +l+pe+L+++ll+++p+      +++rr+++ + +e++e+v+++is+d+ng+nagsfl++n e ++l++Dl+++pll ++k++   ++eq
       EPX73371.1 181 LQDLFLSPEKLKSSLLTDQPLwsqiitEEKRRTPSAYDNEMIENVEFLISEDHNGVNAGSFLVKNTETMALFMDLLTEPLLVDYKVV---RHEQ 271
                      **************************999**********************************************************...**** PP

  Glyco_transf_34 184 saleyllekhpevlskvglveqkvinsydegekelgykegdlvvhfagCkvankc 238
                      ++++ +l+ hp++++k g+++q+ +n+y++++ +++y+ gdl+vhfagC+v+nkc
       EPX73371.1 272 DLIGLMLHHHPQLAAKFGILPQRYLNAYPHAPTDMEYHPGDLLVHFAGCWVENKC 326
                      ******************************************************9 PP

>> Nucleotid_trans  Nucleotide-diphospho-sugar transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   4.8e-06     0.043     105     172 ..     229     296 ..     203     329 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 4.8e-06
  Nucleotid_trans 105 adelknliNsGfffvrateatkallkkwaeelasesglw..DqdvfnlllregaakesglkvrvLdtalf 172
                      + e++n +N G f v++te+   +++ + e l  + ++   +qd   l+l++ +++ + +k ++L++++ 
       EPX73371.1 229 ISEDHNGVNAGSFLVKNTETMALFMDLLTEPLLVDYKVVrhEQDLIGLMLHH-HPQ-LAAKFGILPQRYL 296
                      45778889***********************9999666567**********9.554.**********998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       695  (0.038764); expected 358.6 (0.02)
Passed bias filter:                      573  (0.0319594); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2407.75
//
Query:       EPX73372.1  [L=566]
Description: pyruvate decarboxylase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.8e-39  135.1   0.1    4.9e-36  123.9   0.1    2.3  2  TPP_enzyme_N  Thiamine pyrophosphate enzyme, N-terminal TPP b
    8.2e-25   87.4   3.1    3.4e-23   82.1   0.0    3.2  4  TPP_enzyme_C  Thiamine pyrophosphate enzyme, C-terminal TPP b
      5e-21   74.9   0.0    1.2e-20   73.6   0.0    1.6  2  TPP_enzyme_M  Thiamine pyrophosphate enzyme, central domain
      1e-05   25.4   0.2    2.9e-05   23.9   0.0    1.8  2  CO_dh         CO dehydrogenase beta subunit/acetyl-CoA syntha
  ------ inclusion threshold ------
      0.093   12.3   0.7       0.17   11.4   0.7    1.3  1  DUF1403       Protein of unknown function (DUF1403)


Domain annotation for each model (and alignments):
>> TPP_enzyme_N  Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.9   0.1   1.4e-39   4.9e-36       2     171 ..       8     182 ..       7     183 .. 0.93
   2 !    8.9   0.0    0.0003       1.1      55     158 ..     425     535 ..     421     539 .. 0.76

  Alignments for each domain:
  == domain 1  score: 123.9 bits;  conditional E-value: 1.4e-39
                   EHHHHHHHHHHHCT--EEEE---CCCHHHHCCHHCT.TSEEEE-SSHHHHHHHHHHHHHHHTS-EEEEE-CHHHHHHCHHHHHHHHHHT--EEEEEE CS
  TPP_enzyme_N   2 tvaealvraLkalgvehvfgvpGsrilplldalseeqgirvvlarhEqgaafaAdgyaratgkpgvvlvtsgpGatnaltalaeAkvdriPllvlsg 98 
                   tv+++l+++L++ g+   f vpG+ +l+lld+l+ ++++  + + +E ++afaA+gyara+g + +++vt+ +Ga+ a+ ++ +A+ +++P++++sg
    EPX73372.1   8 TVGDYLAERLSQIGIINHFVVPGDYNLKLLDYLEYHPKLSEIGCCNELNCAFAAEGYARAHG-ISAAVVTYSVGALTAFDGIGGAYAENLPVILISG 103
                   89***********************************************************8.999999999************************* PP

                   E--CCCHH.....S..TC--T......-CCHHHCCCSSEEEE-SSGGGHHHHHHHHHHHHHSSS--EEEEEEEHHHCC-EEEHH CS
  TPP_enzyme_N  99 drptslrg.....qgvlqqel......dqlalfrpvtkyaervtspeelpealrrAirtalsgrpgPvylelpkdvlleevded 171
                    ++t +++     ++    ++       q+++++++t +a+ +++++e+p++++ A+r+a   ++ Pvy+e+p ++ +++++++
    EPX73372.1 104 APNTNDINsshilHH----TIgthnfdYQMDIAKNLTVAAVALRRAHEAPRLIDHALRQA-ILQHKPVYIEVPTNMATQPCPKP 182
                   *********666633....334444645********************************.99*****************9986 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0003
                   HHHHHHHH.TS-EEEEE-CHHHHHHCHHHHHHHHHHT--EEEEEEE--CCCHH...S..TC--T...-CCHHHCCCSSEEEE-.SSGGGHHHHHHHH CS
  TPP_enzyme_N  55 Adgyarat.gkpgvvlvtsgpGatnaltalaeAkvdriPllvlsgdrptslrg...qgvlqqel...dqlalfrpvtkyaerv.tspeelpealrrA 143
                   A gya a  +++ v++v  g  +  +   la+  + ++P++++  ++  + ++   ++++ + +   d +a+++++  +  +    ++++ e+l++A
    EPX73372.1 425 ALGYAIAApKRRTVIMVGDG-SFQLTGQELAQMVLHKLPVIIFLINNRGYTIEiqiHDGPYNRIknwDYAAFMESFNAEDGKAkGLKANTGEELEQA 520
                   78888877566666666444.566666778888999999999988888888888886666666677788888888885555441578999******* PP

                   HHHHHSSS--EEEEE CS
  TPP_enzyme_N 144 irtalsgrpgPvyle 158
                   i++al ++ gP+++e
    EPX73372.1 521 IQIALANKEGPTLIE 535
                   ************997 PP

>> TPP_enzyme_C  Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1       1.7   6.1e+03     114     128 ..      62      76 ..      56      83 .. 0.74
   2 !    4.2   0.0    0.0091        33     108     153 .]     126     170 ..     105     170 .. 0.69
   3 ?   -1.7   0.0      0.61   2.2e+03     109     126 ..     229     246 ..     218     256 .. 0.72
   4 !   82.1   0.0   9.5e-27   3.4e-23      24     153 .]     412     536 ..     391     536 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.7
                   HHHHHHTTSEEEEES CS
  TPP_enzyme_C 114 aklaealGakgarve 128
                   + +a+a+G+++a+v+
    EPX73372.1  62 EGYARAHGISAAVVT 76 
                   568999999977554 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.0091
                   S----HHHHHHHTTSE.EE.EESSH.HHHHHHHHHHHHCSSSEEEEEE CS
  TPP_enzyme_C 108 lkpvdfaklaealGak.ga.rvekadveeleealkealekkgpaliev 153
                   ++++d   +a+ l +  +a r  ++ +  ++ al++a+ +++p++iev
    EPX73372.1 126 DYQMD---IAKNLTVAaVAlRRAHEAPRLIDHALRQAILQHKPVYIEV 170
                   34444...4555544434454445558999********999*****97 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 0.61
                   ----HHHHHHHTTSEEEE CS
  TPP_enzyme_C 109 kpvdfaklaealGakgar 126
                    ++ f klaeal a +++
    EPX73372.1 229 AEKAFLKLAEALDAAVVV 246
                   456899999999888543 PP

  == domain 4  score: 82.1 bits;  conditional E-value: 9.5e-27
                   ETTTS-TTTHHHHHHHHHHHSTTSEEEEEEEHHHHHHTGGGHHHHHHTT-SEEEEEEE-SBCCCHHHHHHHHTCCTTTTSBB.BS----HHHHHHHT CS
  TPP_enzyme_C  24 sgglgtmGyglpaAiGaklakpdrevvaivGDGgflmilqelatavrrnlpitvvvlnNegygmtggqqepfggkrksgpagkdlkpvdfaklaeal 120
                   +  +g++G+++p A+G ++a+p+r+ v +vGDG+f+ ++qela++v ++lp++++++nN+gy    + ++  ++ r         k+ d+a+++e++
    EPX73372.1 412 EMQWGHIGWSVPSALGYAIAAPKRRTVIMVGDGSFQLTGQELAQMVLHKLPVIIFLINNRGYTIEIQIHDGPYN-R--------IKNWDYAAFMESF 499
                   56789*********************************************************766666666664.2........7899********* PP

                   TSE.EE....EESSH.HHHHHHHHHHHH.CSSSEEEEEE CS
  TPP_enzyme_C 121 Gak.ga....rvekadveeleealkeal.ekkgpaliev 153
                    a+ g     + ++   eele+a++ al +k+gp+lie+
    EPX73372.1 500 NAEdGKakglKANTG--EELEQAIQIALaNKEGPTLIEC 536
                   988877785565666..***********99*******97 PP

>> TPP_enzyme_M  Thiamine pyrophosphate enzyme, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.6   0.0   3.5e-24   1.2e-20       3     112 ..     205     314 ..     203     334 .. 0.87
   2 ?   -3.4   0.0       2.1   7.5e+03      12      23 ..     435     446 ..     432     463 .. 0.70

  Alignments for each domain:
  == domain 1  score: 73.6 bits;  conditional E-value: 3.5e-24
                   HHHHHHHH-SSEEEEE-CHHCHTTGHHHHHHHHHHHT-EEEEEGGGTTSS-TTSTTEEE.ESGGGSCHHHHHHHHH-SEEEEES-SSSTCCCTTTTT CS
  TPP_enzyme_M   3 kaaellkaakrpvilvGggvarsgaseelrelaeklgiPvvttlmgkgvipedhplylg.mlglhgskaanealeeaDlvlalGarfddirttgsep 98 
                    aa+l++++++p++l+G + + +ga++++ +lae+l++ vv ++++kg+i+e+ ++y+g ++gl ++++a+++ e aD+ +  G+ f+d+++ g++ 
    EPX73372.1 205 VAADLISKSEKPLMLAGPKLRAAGAEKAFLKLAEALDAAVVVQPNAKGFISEEYKNYAGvYWGLCSTRNADKIGEFADFFIGAGTVFNDYTSNGYKV 301
                   59****************************************************************************************9999665 PP

                   .TTTTT-EEEEEESS CS
  TPP_enzyme_M  99 .efapeakiihidid 112
                    + +   ++i  d  
    EPX73372.1 302 gPTPD--QFIDSDYM 314
                   33333..35544443 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2.1
                   SSEEEEE-CHHC CS
  TPP_enzyme_M  12 krpvilvGggva 23 
                   +r vi+vG g  
    EPX73372.1 435 RRTVIMVGDGSF 446
                   688999998864 PP

>> CO_dh  CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.0     8e-09   2.9e-05       8      76 ..     186     253 ..     173     269 .. 0.80
   2 ?   -3.7   0.1       2.5   8.9e+03      57      90 ..     337     370 ..     326     381 .. 0.58

  Alignments for each domain:
  == domain 1  score: 23.9 bits;  conditional E-value: 8e-09
                 XXXXXXXXXX--EEE--SHHHHHHHHHSSSEEEEE-S--.-HH.HHHHHHHHHTSSSEEEEETHHHTT- CS
       CO_dh   8 fdeaaianskkatleealkvvakmikkakrPllivGpqvlkaeneeakekkilekklkvvatalkeagl 76 
                 + +++   s ka+le+a  v+a +i+k ++Pl++ Gp+++ a  e a+ k  +  + +vv  + + +g 
  EPX73372.1 186 SAVIEPETSDKASLEQATDVAADLISKSEKPLMLAGPKLRAAGAEKAFLKLAEALDAAVVVQP-NAKGF 253
                 55666678899********************************99***999999999988877.44443 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 2.5
                 HHHHTSSSEEEEET.HHHTT-G..GGSE-HHHHHH CS
       CO_dh  57 kkilekklkvvata.lkeaglkdyekknklveltk 90 
                  k  +k+ ++v  a +k a+lk y + n++  lt+
  EPX73372.1 337 DKVSKKNATMVEYArIKPALLK-YAPANPKELLTR 370
                 4555555555555534555555.777776666555 PP

>> DUF1403  Protein of unknown function (DUF1403)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.7   4.8e-05      0.17     228     267 ..     197     237 ..     186     252 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 4.8e-05
     DUF1403 228 eaveealrlaaelsrraer.LlavaPklRakgadavvdllL 267
                 ++ e+a++ aa+l +++e+ L+ + PklRa ga+++  +l 
  EPX73372.1 197 ASLEQATDVAADLISKSEKpLMLAGPKLRAAGAEKAFLKLA 237
                 57899********999998577788*********9976664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (566 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       392  (0.021864); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 3873.77
//
Query:       EPX73373.1  [L=859]
Description: glutathione transporter Pgt1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.5e-193  644.9  43.3   1.7e-193  644.7  43.3    1.0  1  OPT       OPT oligopeptide transporter protein


Domain annotation for each model (and alignments):
>> OPT  OPT oligopeptide transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  644.7  43.3  9.4e-198  1.7e-193       2     616 .]     159     818 ..     158     818 .. 0.99

  Alignments for each domain:
  == domain 1  score: 644.7 bits;  conditional E-value: 9.4e-198
         OPT   2 lTlRavvlGillgvlgsavnmyfglrtglvsissipaallafplgkalarilpk.........lslnpgpftikEnvliqtmasaaatlalatglivvi 91 
                 +T+R +vl +l++++++avn++f+lr++++sis i+a++l fplgk+l  +lp+         ++lnpgpf+ kE++ i++++s ++++a+at++++++
  EPX73373.1 159 NTWRTWVLTTLFVIVFAAVNQFFSLRYPSLSISFIVAQILLFPLGKLL-NLLPNwkigyrrfsFYLNPGPFNTKEHATITIAVSLTSSTAYATNILSAQ 256
                 8**********************************************9.9************************************************* PP

         OPT  92 palelygqsagfgylillslsvqllGvgfagplRkflvypeklifPsglataellkalhkpegee...............ksrlkfflivflgsfvwgl 175
                 + +  y+q+ ++gy il++l +q+lG+gfag++R+++vyp+++++P++l++a l+++lh+  g+e               +sr++ff+++f+g+fv+++
  EPX73373.1 257 TSF--YNQDLSWGYKILVVLTSQMLGYGFAGLTRRWIVYPASMVWPQTLVSAVLFRTLHGDAGNEigetqdgnttangwsISRYRFFAYIFIGAFVFYW 353
                 ***..**********************************************************99********************************** PP

         OPT 176 fplylfpalssfswltwiapknvvlanlf....glgllpltfdwnviaayiGsglivplwvavnmliGavlswgiliPllyysngwypaylp....... 263
                 fp+++f+als+f +l+wi+pkn v+++lf    glg+ p tfdw+++  y +++l  p+wv++n+++++vl+++i++P+lyy+ +w+++ylp       
  EPX73373.1 354 FPGFIFTALSYFTFLCWIWPKNRVVNQLFgynsGLGIVPVTFDWQQVV-YNSNPLASPWWVISNTFGSVVLIFWIVVPILYYKSVWFSNYLPmlsssty 451
                 ************************************************.999*********************************************** PP

         OPT 264 ......ydvteildedgvldyekyigyglmllaalvallylvqfaaitllivhtilkhgkdikaalksarsprteeddrhrrlmrkykdvpmwwylall 356
                       ++ +++l++d+++d+ ky++y++ +++++++++ +++faa+t++++h il++gkdi+++l++    r + + +hr+lmr+y++ p+wwylal+
  EPX73373.1 452 dntgktFNSSRVLNSDLSFDQSKYESYSPLYMPMSYSMSTALNFAAVTSVFTHCILYNGKDIWQRLRDE---RGKFECVHRKLMRNYQEAPQWWYLALF 547
                 ********************************************************************9...999999********************* PP

         OPT 357 vlslvigiivvealftqlpvwglllalllafllaivsaiiaGltglnpvsgigkltqlifgallpgrpvanlvfgavvyaaaaqagdfmqDLKtGhllk 455
                 +++++++i++++++ tq+pvw++++a+l+ ++ +i+ +i+ G+t++  ++g++++t+l+ g++lpgrpvanl+++ ++++ + q+ +f +DLK+++++k
  EPX73373.1 548 IITFGLSIFTIQYYDTQCPVWAFIVAMLIFIINFIPQGILEGITNQ--HVGLNIITELVGGYMLPGRPVANLMIKLYGFIPMRQGLEFSRDLKLAQYMK 644
                 **********************************************..*************************************************** PP

         OPT 456 asPraqfvaqliGtlvgavvniavlkllvkaygdictadasnaftaPqakvfaavavl..lvggk.........kglpwafllgavapfilllllkkfp 543
                 ++Pr++f++q+++t++g v++++v +++  +++dict ++s+ ft+P+ +++++++ +  ++g++         ++l ++fl+ga+apf +++l kkfp
  EPX73373.1 645 VPPRILFYVQIFATVLGGVTQVVVQEWMRFHIKDICTHKQSDGFTCPNGRSIYNASLIwgAIGPEklfskgkpyYPLLYFFLIGAIAPFFTYVLYKKFP 743
                 **************************************************************************99*********************** PP

         OPT 544 kkstarklplplafavgfylppsl...sialligglianlwlkrrdaewakkynyvlaaGLiaGealmgviiaflv 616
                  ks+  kl+ p++f++++ +pp++   + + +i+g+++n+++++r+ +w+ kynyvlaa+L+aG a++gv+i+++v
  EPX73373.1 744 -KSWYGKLNAPVFFTGPGNIPPATginYSSWAIVGFVFNFVIRKRAVHWWTKYNYVLAAALDAGVAVAGVVIFLCV 818
                 .99*********************8873366888****************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (859 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1069  (0.0596241); expected 358.6 (0.02)
Passed bias filter:                      493  (0.0274974); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.72u 0.33s 00:00:01.05 Elapsed: 00:00:00.48
# Mc/sec: 5355.46
//
Query:       EPX73374.1  [L=400]
Description: alpha-ketoglutarate-dependent sulfonate dioxygenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.4e-49  168.0   1.0    4.7e-49  167.6   1.0    1.1  1  TauD       Taurine catabolism dioxygenase TauD, TfdA family
     0.0092   15.5   0.1      0.025   14.1   0.1    1.8  1  Lipid_DES  Sphingolipid Delta4-desaturase (DES)


Domain annotation for each model (and alignments):
>> TauD  Taurine catabolism dioxygenase TauD, TfdA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  167.6   1.0   5.2e-53   4.7e-49       2     267 ..     111     376 ..     110     377 .. 0.87

  Alignments for each domain:
  == domain 1  score: 167.6 bits;  conditional E-value: 5.2e-53
        TauD   2 vkpltpkfgae..gvdlsdleslddelkeelrellaeygvvvfrgfplspeqqlefarrfG.....plygtpgrgtntkygevldvssvyesadianla 93 
                 +++l +++g+   gv+ls+   l+d +k+el +l+ae+gvv f+++  s e+++++  + G     +    p   + ++++ v++ +++++s++  n+ 
  EPX73374.1 111 IEHLGRDLGTVlhGVQLSQ---LTDVQKDELARLMAERGVVYFPDQKQSIEEFESLGLYYGtphihGANAIPRNDRWKNFHVVYT-DDKNQSDTVQNVP 205
                 6778888888888889999...77777*********************************9874443333344444444444444.4455555555544 PP

        TauD  94 yttllwHtDlsylesppgiqlLhcleapatGGetpfvDgraaynaLpeelpellegltavrvyyhyrggglrteqelpavdkhprtghpvvrthpvltg 192
                    +  HtD s++e+p+  +++ +l++p++GG+t f +g+aay+ L+e l++ leglt v++  ++     r +     +++   + hp+vrthpv tg
  EPX73374.1 206 QIRQ-IHTDVSFEEQPTAQTFFKALKIPSQGGDTVFYSGYAAYETLSEPLKKYLEGLTLVHSGVEQAE--MRRKAGHATRREGILNAHPIVRTHPV-TG 300
                 4444.6***********************************************************999..999999999****************8.** PP

        TauD 193 rkallvnppfatrieglgtpeskelldaleelled.peftyrfqwqeGdlvifdNrrvlHgrt.afdegeeRhllrc 267
                 +k+l+v+p f ++i +++ +es+++ld+l+++++   + +++++w e+ +v +dNr v+H++t ++ +   Rh+ r+
  EPX73374.1 301 WKSLYVSPSFSRYIPEVPRAESDAILDFLYQHIATlSASSVKIRWAENGVVAWDNRVVVHRATyDHYPQ-TRHFIRI 376
                 **************9********************67***************************76466.9**9986 PP

>> Lipid_DES  Sphingolipid Delta4-desaturase (DES)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.1   2.8e-06     0.025      14      29 ..     279     294 ..     268     295 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2.8e-06
   Lipid_DES  14 HasRRkeILkkhPeik 29 
                 Ha+RR  IL++hP ++
  EPX73374.1 279 HATRREGILNAHPIVR 294
                 *************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (400 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       455  (0.0253779); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2860.11
//
Query:       EPX73375.1  [L=506]
Description: spermidine family transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.5e-26   92.0  40.9    3.5e-26   92.0  40.9    2.0  2  MFS_1     Major Facilitator Superfamily
    1.3e-06   27.6  39.7      3e-06   26.4  39.7    1.8  1  Sugar_tr  Sugar (and other) transporter
  ------ inclusion threshold ------
        6.2    6.3  11.0      0.056   13.0   1.3    2.3  3  DUF3169   Protein of unknown function (DUF3169)


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.0  40.9   5.8e-30   3.5e-26       3     351 ..      72     453 ..      70     455 .. 0.79
   2 ?    1.1   2.0     0.026   1.5e+02     138     179 ..     455     496 ..     452     504 .. 0.81

  Alignments for each domain:
  == domain 1  score: 92.0 bits;  conditional E-value: 5.8e-30
       MFS_1   3 laaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrr.vlllglllfalglllllfasslwlllvlrvlqGlgag 100
                 +++f + +++++ +p++  +l++ + i   ++ l+++ly lg a++ ++++++s+  Gr+  v++  +++++l+ +  + a ++ +++  r+++Gl+ag
  EPX73375.1  72 MTTFAAQFNSTTMSPTAG-HLTKVYPIGQEVATLATSLYVLGIAFGPMIFAPFSEMNGRKVgVFFPFFISMLLT-AGTASADNVAAIMCTRFFSGLFAG 168
                 679999999********9.******************************************9999999999999.4444238888************** PP

       MFS_1 101 alfpagaaliadwfpkeergraigllsagfslGailgpllggllasslg...Wravfyilaivsllafvlfllllpeepperkrkspkeee........ 188
                 a + +++ ++ad++++ +r+ a+ +++ ++ +Ga +gp++++ll+  ++   Wr++ +++ iv    +++ ++++ e++++    ++++ +        
  EPX73375.1 169 APIVSSGGVMADLWHPAQRATALIFYAFFVVCGADFGPIISSLLS-KGSdtaWRWPLWFMVIVQSAILLINMIVIDETYVPVILARKARNLrlstnnwg 266
                 *********************************************.444488***********888877777888888888888888777799999999 PP

       MFS_1 189 ............kgtgpaplvpawkallkdpvlwillialllfffgfsglltllplylqevlglsglllaglllallalvgailallagrlsdr..... 270
                             k  + ++l+ ++ +l ++ v++i+++a+++ + +++++lt++p  +++ ++++g ++++  +++++++g+ ++ ++  l +r     
  EPX73375.1 267 lhaaheqykldaKEFVTFHLLRPFAMLATPIVFFIAMFASYVYG-ILYIILTTIPYTFNMSRNWTGTVSTL--PMIAFFLGVLIGGVFNILWNRryarl 362
                 99996664444433333333336777777777753444444443.66668888888779999999666666..66666665555556666664444446 PP

       MFS_1 271 .......lgrrrrlllallllllaalglallavtssavllllvlvl....iGf.glgfvfpsllalasdlappeeagtasglfntagslggal 351
                          ++ rl +++ ++ l+ +g++++a+ts  ++++++ ++    +G+ ++ +++++l++l++ ++  + a++a++++++++s+ g  
  EPX73375.1 363 lqenggqPLPEQRLPIMMMSGWLMPAGIFVFAWTSYESIHWIAPFIgiamMGIgFFIIFQGCLNYLVDTFT--KFAASAIAANTFTRSICGGS 453
                 65555554449***********************9999999955555445888444445888888888888..***************98765 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.026
       MFS_1 138 pllggllasslgWravfyilaivsllafvlfllllpeepper 179
                 pl++ ++ + lg ++   ++++v+l ++ + +++++  ++ r
  EPX73375.1 455 PLFSRIMFEKLGVHWGGTLVGFVALGMIPIPFVFYFFGKSLR 496
                 89999999****999999999999999887777776665555 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4  39.7     5e-10     3e-06      46     438 ..     100     490 ..      65     495 .. 0.75

  Alignments for each domain:
  == domain 1  score: 26.4 bits;  conditional E-value: 5e-10
                 .HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHH CS
    Sugar_tr  46 vlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyq 144
                    +l +s++++G ++G +++ +++++ GRk +  +  ++++  ++ +a a+   +v +++  R+++G+++G+  v +   ++ + +++ R +   +y 
  EPX73375.1 100 EVATLATSLYVLGIAFGPMIFAPFSEMNGRKVGVFFPFFISMLLTAGTASAD---NVAAIMCTRFFSGLFAGAPIVSSGGVMADLWHPAQRATALIFYA 195
                 456899*****************************99999999999999999...9******************************************* PP

                 HHHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHH.HHHHHHHHGGGS---HHHHHHTT-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH.....H CS
    Sugar_tr 145 laitfGilvaaifglglnktsnadgwrillglqlv.pallllilllflPESPrylvekgkeeeakevlaklrgeedadrelaeekdsleaeqeeekasw 242
                 ++++ G  ++ i+   l+k s+ + wr++l++ ++  + +lli +++++E+   +v +    +a+      +++ +     + + d+ e     + + +
  EPX73375.1 196 FFVVCGADFGPIISSLLSKGSD-TAWRWPLWFMVIvQSAILLINMIVIDET---YVPVILARKARNLRLSTNNWGLHAAHEQYKLDAKEFV---TFHLL 287
                 **********************.8999999876551567889999******...5555555566666666566655555555555555555...22334 PP

                 TTHHHHSH...HHHHHHHHHHHHHHTTHHHHHHHTTTHHHHSS-THH..HHHHHHHHHHHHHHHHHHHHHHHHS-SHHHHHHH.............HHH CS
    Sugar_tr 243 kellssktvrqrlligvvlqifqqltGinaimyysptifenlglsks..llvtiivgvvnfvatfvaiflvdrfGRRtllllG.............aag 326
                 +++    t     ++ +  +++  + Gi +i  + +ti  +  +s     +v+ + ++  f+ ++++  +   + RR+  ll              +++
  EPX73375.1 288 RPFAMLAT----PIVFFIAMFASYVYGILYI--ILTTIPYTFNMSRNwtGTVSTLPMIAFFLGVLIGGVFNILWNRRYARLLQenggqplpeqrlpIMM 380
                 44444433....3333333344555665544..579*********994444444445556666666657778899***999999999*******87778 PP

                 HHHHHHHHH..HHHHTTSS...CHHHHHHHHHHHHHHHTTTTHHHHHHHHHHSHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHT-HHHHHHHHH CS
    Sugar_tr 327 maicfvilgivalllvakskaasivaivfialfialfalgwgpvpwvlvsElfpqsvRskalaiavavnwlanflisllfpiiteaigggyvflvfagl 425
                 m+  ++  gi ++++++ ++   i+  ++ia++ + f + + +++  ++ ++f +++ ++a+a  +++  ++     l+  i++e++g  + + + +++
  EPX73375.1 381 MSGWLMPAGIFVFAWTSYESIHWIAPFIGIAMMGIGFFIIFQGCL-NYLVDTF-TKFAASAIAANTFTRSICGGSFPLFSRIMFEKLGVHWGGTLVGFV 477
                 888888888999999999866666677777777777777777777.5668999.5899******************************55555555555 PP

                 HHHHHHHHHHHS- CS
    Sugar_tr 426 avlfiifvfffvp 438
                 a+ +i + f+f++
  EPX73375.1 478 ALGMIPIPFVFYF 490
                 5555544444443 PP

>> DUF3169  Protein of unknown function (DUF3169)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1      0.16   9.7e+02      40      77 ..     222     258 ..     189     279 .. 0.50
   2 ?   13.0   1.3   9.3e-06     0.056     102     166 ..     301     365 ..     298     367 .. 0.89
   3 ?   -4.0   0.6       1.4   8.5e+03     124     147 ..     395     419 ..     389     429 .. 0.45

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.16
     DUF3169  40 alkelllligskilpllliiavlvviis.....vvflrkakkl 77 
                 +   +++ ++s ++ l+++i +           v++ rka++l
  EPX73375.1 222 WPLWFMVIVQS-AILLINMIVI-----DetyvpVILARKARNL 258
                 33333333344.2222222222.....1333336666666665 PP

  == domain 2  score: 13.0 bits;  conditional E-value: 9.3e-06
     DUF3169 102 iglilssvslilsfllilasyslkiyeeesssklvlifliaivlfliilflkiiiqvrivklikk 166
                 i++++s v+ il+++l+++ y+++++ + + +  +l+++++ + +li  +++i+++ r+ +l+++
  EPX73375.1 301 IAMFASYVYGILYIILTTIPYTFNMSRNWTGTVSTLPMIAFFLGVLIGGVFNILWNRRYARLLQE 365
                 6899********************888877776777779999999**************999886 PP

  == domain 3  score: -4.0 bits;  conditional E-value: 1.4
     DUF3169 124 lkiyeeesssklvlif.liaivlfl 147
                 ++ ye+  +   ++ + +++i +f+
  EPX73375.1 395 WTSYESIHWIAPFIGIaMMGIGFFI 419
                 4444443332222222333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (506 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       815  (0.0454571); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.27s 00:00:00.92 Elapsed: 00:00:00.46
# Mc/sec: 3307.47
//
Query:       EPX73376.1  [L=413]
Description: agmatinase 2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.6e-94  314.3   0.0    9.9e-94  314.0   0.0    1.1  1  Arginase  Arginase family
     0.0082   16.4   0.1      0.014   15.6   0.1    1.3  1  UPF0489   UPF0489 domain


Domain annotation for each model (and alignments):
>> Arginase  Arginase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  314.0   0.0   1.1e-97   9.9e-94       2     277 ..      87     395 ..      86     397 .. 0.95

  Alignments for each domain:
  == domain 1  score: 314.0 bits;  conditional E-value: 1.1e-97
                 EEEEEEEE--TTTSSSGGGGGHHHHHHHHHHTSBTHCHEETTTTE...SCCSEEEEEEEEE--SSCHHHHHHHHHHHHHHHHHT............... CS
    Arginase   2 dvallGvPfdaagsgrpGarfGPraireasarleealeynlelgv...leelkivdlgdvavtpvdneevleqieeavaeilka............... 82 
                 d+a++GvPfd+a+s+rpGarfGPrair+as+r+++ +++n++l++    ++ ki+d+gd+++tp+dn+ +l+q++e + ++l++               
  EPX73376.1  87 DIAIVGVPFDTAVSYRPGARFGPRAIRTASSRQTSLRSFNPSLNInpyRTNTKIIDCGDIPITPFDNKLALKQMTEGYIDLLSHsvatpadsqnkrnsa 185
                 89********************************8788999999999999*********************************9877777777777777 PP

                 .......TCEEEEEESSGGGHHHHHHHHHHHHSTTEEEEEESSS----SSC.......TTTBSSSTTSHHHHHHHHTSECGCEEEEEEE-STCSH.... CS
    Arginase  83 .......gklpivlGGDHsialgilralaekygkplgvihfDAHaDlrtpe.......tegsgnshGtpfrraaeegllkpkklvqiGirsvdne.... 163
                        + + + lGGDHsial++lral + y+ +++vihfD+H+D+++p+       +e+s+++hGt+f+ a++egl+++ +++++G+r++ ++    
  EPX73376.1 186 lakdgkfHPRLVSLGGDHSIALSSLRALGKLYQ-NVSVIHFDSHLDTWNPStyhshwmSEQSEFTHGTMFWLASQEGLINNGSSIHAGLRTRLSGtdyf 283
                 77776666666*******************998.6***********************99*************************************** PP

                 HHHHHHHTTSEEEEHHHHHHHHHHHHHHHHHHHHTCTTSEEEEEEEGGGBBTTTSTSSSS-BSS-B-HHHHHHHHHHHHCHSEEEEEEEE-B-GGGSST CS
    Arginase 164 eyelakelgirvitmreidelglkavveeilervgaeedpvylSfDiDvlDpavaPGtGtpepgGltlrellallrelaeklnlvgaDvvEvnPaldte 262
                 +ye +k++g+  i++ eide+g+k +ve+i++ vg  ++ vylS+DiDvlDp +aPGtGtpe+gG+t+re++++lr+l ++ln+vgaD+vEv+P++d +
  EPX73376.1 284 DYEEDKRVGFMLIEASEIDEIGVKGIVERIKKTVG--DNLVYLSIDIDVLDPGLAPGTGTPETGGWTSREMKSILRGLDGHLNIVGADIVEVSPPYDDQ 380
                 *****99***************************8..56************************************************************ PP

                 TTHHHHHHHHHHHHH CS
    Arginase 263 aeqtarlaarlvrel 277
                 ae+ta++aa++++e+
  EPX73376.1 381 AESTALAAADFIFEI 395
                 *************95 PP

>> UPF0489  UPF0489 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.1   1.6e-06     0.014      21      51 ..     214     249 ..     202     267 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 1.6e-06
     UPF0489  21 kklpsdlslvHlDaHpDllipk.....kmsaddvfn 51 
                 +kl +++s++H+D+H D+  p      +ms++  f+
  EPX73376.1 214 GKLYQNVSVIHFDSHLDTWNPStyhshWMSEQSEFT 249
                 5677**************999655555555554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (413 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       388  (0.0216409); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2922.72
//
Query:       EPX73377.1  [L=247]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.5e-30  105.3   0.0    4.2e-30  105.0   0.0    1.1  1  NAD_binding_10  NAD(P)H-binding
    0.00027   20.5   0.0    0.00038   20.0   0.0    1.2  1  Epimerase       NAD dependent epimerase/dehydratase family
     0.0015   17.8   0.0     0.0019   17.4   0.0    1.3  1  NAD_binding_4   Male sterility protein
  ------ inclusion threshold ------
      0.018   14.6   0.0      0.027   14.1   0.0    1.3  1  NmrA            NmrA-like family


Domain annotation for each model (and alignments):
>> NAD_binding_10  NAD(P)H-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.0   0.0   9.5e-34   4.2e-30       1     182 [.       8     210 ..       8     212 .. 0.79

  Alignments for each domain:
  == domain 1  score: 105.0 bits;  conditional E-value: 9.5e-34
                     TTTSHHHHHHHHHHHHC-T-EEEEEETTHHHCHHHHCT.TTCEEEE--TT-CCHHHHHHT..T-SEEEES---TCC.........HHHHHHHHHH CS
  NAD_binding_10   1 GAtGkvGrllvkellargghevtalvRnpeklaeleae.eglevvegdvtdvedlaealk..gadaVvsalggggk.........deegaknivd 83 
                     G++Gkv+ l +k + ++ +h v  ++Rn+++ +++e+   + ++++++  +++++a  lk  ++d+Vv+++g+ggk         d ega+++ d
      EPX73377.1   8 GGHGKVALLFTKVARES-KHVVYNVIRNASHKEDVEEWgGRPKILSLEEASTDEIAGLLKetQTDTVVFSAGAGGKggpertkavDYEGAVKVYD 101
                     9**************99.5****************9555899*****************944457787777666666888777777777****** PP

                     HHHHCT--EEEEEEETTTTS.GCGCH.........HHHHHHHCCHHHHHHHHHHHHHH..HHSSSEEEEEEE-CEE-ST--SEEEEETTSS---- CS
  NAD_binding_10  84 aakeagvkRfvlvsaigvgd.evpge.........fgewnkellkaylaakraaeell..rasgldwTivrpggLtdepttkyrvvekgepfkgg 166
                     a+k ag +R+++vsai+ +d ++p +          +e  +++l +y+  k  a+++l  r+ ++dwTi+rp++Ltd p+++  ++  g+   ++
      EPX73377.1 102 AMKLAGLRRLIMVSAIDNRDmSQPPPihyttadrkMSEEIHKALPTYYHYKFLADQELirRTEDIDWTILRPSFLTDHPSSGLIAL--GNISIKQ 194
                     *****************998433333221111111333344588899999**99998633447****************9876444..5555678 PP

                     EEEHHHHHHHHHHHCT CS
  NAD_binding_10 167 sisradVAdvlvavld 182
                      isr+ VA++++  ++
      EPX73377.1 195 PISRETVARAILGFAS 210
                     9*********997665 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   8.4e-08   0.00038       3     170 ..       6     174 ..       4     177 .. 0.77

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 8.4e-08
                 EETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC.......EEEE--TT-HHHHHHHHHHHT-SEEEE--S---HHHHHHSHHHHHHHHTHH CS
   Epimerase   3 VtGatGfiGsalvkallekgyevigldrlssasntarledl.......elveldltdrsalerlfkeeqpdavihlAavggvaassedpadfieknlqg 94 
                 V G++G +   ++k   e ++ v ++ r+ s  +++    +       ++  l+    ++++ l+ke+q d+v+  A+ gg +     p+++   + +g
  EPX73377.1   6 VFGGHGKVALLFTKVARESKHVVYNVIRNAS--HKED---VeewggrpKILSLEEASTDEIAGLLKETQTDTVVFSAGAGGKGG----PERTKAVDYEG 95 
                 89******************99999999933..2222...2235788999999999999*****************99999987....88889999*** PP

                 HHHHHHHHHHHTCTEEEEEEEGGGGTSCSSSS....BSTCSTTS--.--SSHHHHHHHHHHHHHHHHHHHHT-EEEEEEES CS
   Epimerase  95 tlnlleaarkagvkrllflsSsevYGkdaeqp....keettltgpl.kpnspYaaaKlageklveayaaqyglnaiilrlf 170
                 ++++ +a++ ag++rl+ +s       +++ p    + +   ++++ k    Y   K ++++ +   +++ +++ +ilr++
  EPX73377.1  96 AVKVYDAMKLAGLRRLIMVSAIDNRDMSQPPPihytTADRKMSEEIhKALPTYYHYKFLADQELI--RRTEDIDWTILRPS 174
                 ********************965555555533444322222234446777778888888887766..46666777777775 PP

>> NAD_binding_4  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   4.3e-07    0.0019     157     220 ..     130     190 ..      49     228 .. 0.68

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 4.3e-07
                    ...HHH--EEEETTTCCCHHHHHHHHHHHHHHHHHHHH---EEEEEE-EEE--SSST---TTSH CS
  NAD_binding_4 157 keekldederaklkglpntYeqsKalaEklvrearrrsglpvvivRpsiitgesktGwingsdl 220
                     + ++ +++++ +k lp tY   K+la++ + +    +++ ++i+Rps +t ++++G i   ++
     EPX73377.1 130 YTTADRKMSEEIHKALP-TYYHYKFLADQELIRRT--EDIDWTILRPSFLTDHPSSGLIALGNI 190
                    23344445555555555.66666*****9888888..69******************9877664 PP

>> NmrA  NmrA-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   5.9e-06     0.027       2     117 ..       5     131 ..       4     152 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 5.9e-06
                 EESSTTSHHHHHHHHHHHHHT-EEEEEES-S.-SHHHHHHHHSTTEEEES-TT-HHHHHHHHT...T-SEEEE---GG.........S-HHHHHHHHHH CS
        NmrA   2 lviGaTGrqGksvvrallkaghkvralvRdt.kselakslkeaGvelvkgdlddkeslvealk...gvdvvfsvtgfy.........skeiedgkklvd 87 
                 +v+G+ G+ +  +++++ +++h v  ++R+  ++e +++   ++  l   +  + + ++ +lk   +  vvfs+ +               e  +k+ d
  EPX73377.1   5 TVFGGHGKVALLFTKVARESKHVVYNVIRNAsHKEDVEEWGGRPKILS-LEEASTDEIAGLLKetqTDTVVFSAGA-GgkggpertkAVDYEGAVKVYD 101
                 7*****************************977889999999997554.444455555555551104445666655.3589999866666777899*** PP

                 HHHHHS-SEEEEEE---GG.GT.SSS---T CS
        NmrA  88 AakeaGvkhfiySslgddndrsnaeepavp 117
                 A k aG +++i  s  d+ d s+    + +
  EPX73377.1 102 AMKLAGLRRLIMVSAIDNRDMSQPPPIHYT 131
                 **************9999999876555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       444  (0.0247643); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 1810.37
//
Query:       EPX73378.1  [L=544]
Description: allantoate permease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-44  151.6  28.0    7.1e-44  150.2  28.7    1.3  2  MFS_1     Major Facilitator Superfamily
    7.9e-06   25.4   2.6    7.9e-06   25.4   2.6    2.0  2  MFS_4     Uncharacterised MFS-type transporter YbfB
  ------ inclusion threshold ------
      0.058   13.4   0.1       0.28   11.1   0.1    2.1  2  TBP       Transcription factor TFIID (or TATA-binding protein
       0.35    9.0  10.4      0.084   11.1   3.0    2.6  2  BT1       BT1 family
        2.5    8.6   7.2        7.9    7.0   0.2    3.1  3  DUF2085   Predicted membrane protein (DUF2085)


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.2  28.7     2e-47   7.1e-44       2     352 ..     104     466 ..     103     467 .. 0.85
   2 ?   -3.5   0.0       1.1   3.8e+03     154     183 ..     486     515 ..     481     526 .. 0.57

  Alignments for each domain:
  == domain 1  score: 150.2 bits;  conditional E-value: 2e-47
       MFS_1   2 llaaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfa.sslwlllvlrvlqGlga 99 
                 ++++ + +l+ ++++ a+   ++e+ ++s+s++++l t+++lg+++a++p+G+l +r+    +l+++ +l+++++ll++ + ++   ll+lr+l+G+++
  EPX73378.1 104 CITYGIQYLDKTAISYAAVYGMKEAVHMSGSAYSWLSTMFYLGYMIAQYPAGYLLQRYPIHYFLFIASFLWSACVLLMA-TcTNQHGLLALRFLSGIFE 201
                 789999****************************************************666677777777777734444.2333225************ PP

       MFS_1 100 galfpagaaliadwfpkeergraigllsagfslGailgpllggllasslg....Wravfyilaivsllafvlfllllpeepperkrkspkeee...... 188
                 g+++pa +al++ w+++ee++  +  ++a++++++++g+llg    +  g    W ++f+++++vs ++   +++ +p +p++ k  +++e++      
  EPX73378.1 202 GCVNPAFVALTSMWYKREEQPIRTVAWYAFNGVSIMVGALLGYGTGHIKGslpnWKYPFLVIGAVSNIWSF-VYIIFPKNPVRAKFLNTREKRiaierv 299
                 *******************************************99977778999***************66.68************************8 PP

       MFS_1 189 ......kgtgpaplvpawkallkdpvlwillialllfffgfsg..lltllplylqevlglsglllaglllallalvgailallagrlsdrlgrrrrlll 279
                         t+++++++a++a++ ++    +++ +++++++  +  +++++ l+  + +g+sg + a+ll   +++v++++++++g +++ +++ r+ l 
  EPX73378.1 300 rknrtgMETKRFKFSQALEAFKDPQ----VILLVFYNGMCQVTnaMSVFSGLI-IKGMGYSG-INAVLLTLPSGAVAVGSMVFTGVFAHFFKKGRIFLC 392
                 8888887777777777999999999....788888888888777689999996.*******7.88888888888888888******************* PP

       MFS_1 280 allllllaalglallavtssavllll..vlvl..iGfglgfvfpsllalasdlappeeagtasglfntagslggalg 352
                 ++++ ++++ +l+++  ++s++++ +  v ++  i+ g +++ ++l + +s +  +    ta++ + +++s+g +++
  EPX73378.1 393 MFVSSFTIVGALMIWKIPDSNPWARVvgVWFFspISSGNALALSLLSSNISGYSKKV---TANATMFLFYSVGNIVS 466
                 *************************96644445677777777777777777777444...55555555555555555 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 1.1
       MFS_1 154 fyilaivsllafvlfllllpeepperkrks 183
                  ++ +++  ++++l++ +++e++++ k  +
  EPX73378.1 486 LIATCLFEGVLILLAVYYMYENHRRDKFLK 515
                 444445555555555566666666555555 PP

>> MFS_4  Uncharacterised MFS-type transporter YbfB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   2.6   2.2e-09   7.9e-06      19     165 ..     125     274 ..     118     308 .. 0.78
   2 ?   -1.0   0.3      0.23   8.4e+02     313     334 ..     449     470 ..     368     501 .. 0.67

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 2.2e-09
       MFS_4  19 llaegqlslsqagllaaaNylGYLvGallaafalsagaeRlrllagllatvllllamaltesfaaflliRflaGvasAvv...lvfgsslvlahaaaar 114
                 + +++++s s+ ++l ++ ylGY++    a + l++ +    l ++ ++  + +l ma  +++  +l++Rfl+G+  ++v   +v+ +s+  ++    +
  EPX73378.1 125 MKEAVHMSGSAYSWLSTMFYLGYMIAQYPAGYLLQRYPIHYFLFIASFLWSACVLLMATCTNQHGLLALRFLSGIFEGCVnpaFVALTSMWYKR---EE 220
                 88999***********************9999999999888899999999999999*******************9887643366666666666...45 PP

       MFS_4 115 rervgallfaGvGlGiavsgllvllllqlglsassl...Wlalavlsavllllv 165
                 +++   + +a  G+ i+v++ll + + + + s   +    l+++++s +   + 
  EPX73378.1 221 QPIRTVAWYAFNGVSIMVGALLGYGTGHIKGSLPNWkypFLVIGAVSNIWSFVY 274
                 555555678889999********9999998887776455666666666655433 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.23
       MFS_4 313 rrllglmTasfgigQilGplla 334
                  ++ + m + + +g i+ p l+
  EPX73378.1 449 VTANATMFLFYSVGNIVSPQLF 470
                 4555667778888888888876 PP

>> TBP  Transcription factor TFIID (or TATA-binding protein, TBP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   7.9e-05      0.28      18      67 ..     295     342 ..     287     345 .. 0.79
   2 ?   -2.1   0.0       1.1   3.9e+03      44      62 ..     448     466 ..     440     483 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 7.9e-05
                 -HHHHHHHCCTTTEEE-TTTSSSEEEEETTTTEEEEE-TTSEEEEECESS CS
         TBP  18 dLeklalkaekrnaeYeperfpglvyrlrepkvtaliFssGkvvitGaks 67 
                  +e++ ++  + ++e ++ +f+     +++p+v +l+F +G +++t a s
  EPX73378.1 295 AIERVRKN--RTGMETKRFKFSQALEAFKDPQVILLVFYNGMCQVTNAMS 342
                 55555322..467777777888888999******************9976 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.1
                 EETTTTEEEEE-TTSEEEE CS
         TBP  44 rlrepkvtaliFssGkvvi 62 
                 ++  + +++l++s G++v 
  EPX73378.1 448 KVTANATMFLFYSVGNIVS 466
                 5556678899999999985 PP

>> BT1  BT1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   3.0   2.3e-05     0.084       8     174 ..     117     277 ..     110     319 .. 0.74
   2 ?    1.4   0.7     0.021        74     351     386 ..     370     405 ..     358     409 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 2.3e-05
         BT1   8 lrlavqfmltdrlgidparyqrlsglatlgwvikpltallsDgfallGytkrwYlvvscllgaafallygllpakeasakvaaafillsslgkaivdvl 106
                 +++a+ + +++  ++++++y+ ls++  lg++i    a    g  l  y    +l+++ +l +a +ll+++  +++       a+ +ls ++ + v+ +
  EPX73378.1 117 ISYAAVYGMKEAVHMSGSAYSWLSTMFYLGYMIAQYPA----GYLLQRYPIHYFLFIASFLWSACVLLMATCTNQHGL----LALRFLSGIFEGCVNPA 207
                 56677788999999999999999999999999876654....777788888889999999999999999988877665....78889999999999999 PP

         BT1 107 sdalvselarq..spkagpsLvSwiwlvsavGgiias...vlsGpLldagktrisvlvsaalqlltvvvflfn 174
                   al s   ++  +p    +   +  + ++vG++++     ++G L ++   +  +lv +a+  +   v+++ 
  EPX73378.1 208 FVALTSMWYKReeQPIRTVAWYAFNGVSIMVGALLGYgtgHIKGSLPNW---KYPFLVIGAVSNIWSFVYIIF 277
                 9999999888856677777788888899999999986222456666555...566777777777777777654 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.021
         BT1 351 siagligvtlfnrllkklsyrlvfivttvlqvlagl 386
                 ++++++ + +f +++kk ++ l ++v+ ++ v a +
  EPX73378.1 370 AVGSMVFTGVFAHFFKKGRIFLCMFVSSFTIVGALM 405
                 6899******************99999988776655 PP

>> DUF2085  Predicted membrane protein (DUF2085)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.9     0.023        82      23      85 ..     141     203 ..     140     208 .. 0.83
   2 ?   -3.1   0.0       3.3   1.2e+04      77      86 ..     236     245 ..     213     268 .. 0.66
   3 ?    7.0   0.2    0.0022       7.9      27      78 ..     371     419 ..     364     426 .. 0.72

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.023
     DUF2085  23 tgiylGlllgllllllkaklsklsllllvllllpmaiDgltqllglyestnllRlitGllaGl 85 
                 t +ylG++++ + + +  +  +++++l+++ +l+ a+  l+ + + ++    lR+++G++ G 
  EPX73378.1 141 TMFYLGYMIAQYPAGYLLQRYPIHYFLFIASFLWSACVLLMATCTNQHGLLALRFLSGIFEGC 203
                 56789998866554333578999999999999999999999999999999********99886 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 3.3
     DUF2085  77 litGllaGla 86 
                 ++ G+l G++
  EPX73378.1 236 IMVGALLGYG 245
                 3333343333 PP

  == domain 3  score: 7.0 bits;  conditional E-value: 0.0022
     DUF2085  27 lGlllgllllllkaklsklsllllvllllpmaiDgltqllglyestnllRli 78 
                 +G ++++ ++   a+++k   ++l +++  + i g + ++++  s+ + R++
  EPX73378.1 371 VGSMVFTGVF---AHFFKKGRIFLCMFVSSFTIVGALMIWKIPDSNPWARVV 419
                 3333333333...456666666777888889999****************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (544 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       587  (0.0327403); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 3853.18
//
Query:       EPX73379.1  [L=185]
Description: hypothetical protein SOCG_01129 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-05   25.9   0.0      3e-05   25.0   0.0    1.5  1  DUF1773   Domain of unknown function


Domain annotation for each model (and alignments):
>> DUF1773  Domain of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.0   1.7e-09     3e-05       5      58 .]      65     117 ..      62     117 .. 0.94

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 1.7e-09
     DUF1773   5 sknldfskrksgysassvpflngeepedeePLLpdigsilDinvLS..QlsfFLpG 58 
                  +++++  r ++++++++pf ng+++ + +  Lp+  +i Di+ L   Ql ++L G
  EPX73379.1  65 QRSENILHRVMASDTKPIPFVNGQQH-PAG--LPELITISDIDGLNpeQLKTYLEG 117
                 68999999******************.889..**********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       575  (0.0320709); expected 358.6 (0.02)
Passed bias filter:                      529  (0.0295053); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1368.90
//
Query:       EPX73380.1  [L=367]
Description: galactose-1-phosphate uridylyltransferase Gal7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.5e-64  216.0   0.2    9.2e-64  214.2   0.3    1.8  2  GalP_UDP_tr_C    Galactose-1-phosphate uridyl transferase, C-
    1.2e-61  208.3   0.5    2.2e-61  207.5   0.5    1.4  1  GalP_UDP_transf  Galactose-1-phosphate uridyl transferase, N-
    0.00026   19.9   0.3       0.19   10.5   0.1    2.1  2  DUF4921          Domain of unknown function (DUF4921)
     0.0005   20.5   0.8    0.00097   19.6   0.2    1.7  2  DcpS_C           Scavenger mRNA decapping enzyme C-term bindi
     0.0048   17.6   0.1      0.023   15.4   0.0    2.0  2  HIT              HIT domain
  ------ inclusion threshold ------
      0.016   14.5   0.4       0.24   10.7   0.1    2.2  2  DUF4931          Domain of unknown function (DUF4931)


Domain annotation for each model (and alignments):
>> GalP_UDP_tr_C  Galactose-1-phosphate uridyl transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.57   1.7e+03      78      99 ..     155     183 ..     119     187 .. 0.62
   2 !  214.2   0.3   3.1e-67   9.2e-64       2     164 ..     199     363 ..     198     366 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.57
                    HHHHHHHHHHHHCT.......S---EEEE CS
  GalP_UDP_tr_C  78 ilkklarkydnlfe.......tsfeysmG 99 
                      + +  +y + fe       +s +++ G
     EPX73380.1 155 SSERMHYRYIEFFEnkgsamgCSNPHPHG 183
                    34556778888888888888899999988 PP

  == domain 2  score: 214.2 bits;  conditional E-value: 3.1e-67
                    HHHHHHHHHHH.SS-HHHHHHHHHHHH-TTEEEE-SSEEEE--TT--STT-EEEEESS--SSGGG--HHHHHHHHHHHHHHHHHHHHHCTS---EE CS
  GalP_UDP_tr_C   2 ldsfekYfagsngsillhdyvqmelaekervvelkdsflavvpylakWPfevlllrkaevkslaeladeekedlaailkklarkydnlfetsfeys 97 
                    +++ +kYf+   gs+ll dyv++e++ek+r+v ++dsf+++vpy+a WPfe+ll++k++ +sl+++ +++ +dla+ilk+l++kydnlf tsf+ys
     EPX73380.1 199 IKNMTKYFKSY-GSHLLGDYVKLEMEEKQRIVLENDSFVVLVPYWALWPFETLLISKEHLHSLMDFQEKHVQDLASILKQLTTKYDNLFCTSFPYS 293
                    678899**999.************************************************************************************ PP

                    EEEE---SCCCTT...TT--EEEEE--BCSSTTEB----THHHHT-EEESS-HHHHHHHHH.CS-.SS-TT CS
  GalP_UDP_tr_C  98 mGlhqaplnaeed...nswlHaHfevpllrsatvrkieVGlelLperlrdllaEqaaerlrnals.evHke 164
                    mG+hqapl ++ed   nsw+H+Hf++pllrsa v+k+ VG+e+L+e++rdl++Eqaaerl+ al+   H+ 
     EPX73380.1 294 MGIHQAPLHGTEDecnNSWFHMHFYPPLLRSASVKKFCVGFEMLGEAQRDLTSEQAAERLQ-ALEcTRHYL 363
                    **********9999999********************************************.888677775 PP

>> GalP_UDP_transf  Galactose-1-phosphate uridyl transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  207.5   0.5   7.3e-65   2.2e-61       2     184 .]       2     192 ..       1     192 [. 0.94

  Alignments for each domain:
  == domain 1  score: 207.5 bits;  conditional E-value: 7.3e-65
  GalP_UDP_transf   2 eieeddaiyashrrfnpltgewvlvsphrtkrpwqgqqekiskdtlpekDklkcyLcPgnsrangefnpkykstfvftndFpalsedsnyikte 95 
                      +++++d+   shrr+npl ++wvl+sphr krpwqg+qe i kd+++++D + cyLcPgn ra g++np+y+ t vf nd+pa+++++++  +e
       EPX73380.1   2 KFDFTDH---SHRRYNPLNDTWVLCSPHRGKRPWQGEQEDIVKDEVQNYD-PSCYLCPGNDRAMGTKNPNYTATHVFRNDYPAVKREQPDLVEE 91 
                      78999**...****************************************.***************************************9998 PP

  GalP_UDP_transf  96 aiakn........ilfkaepayGrceviifsskheltladlspkdikavvaaWqektaelka....keypkcvlifENkGaamgvsnphPHgqi 177
                      +++++        +l k++ ++G+c vi+fs++h+ltl++++ + i +vv++W++   +lk     + +++++  fENkG+amg+snphPHgq+
       EPX73380.1  92 QSHEKgqtlslksRLQKTQGVKGDCFVICFSPNHSLTLPRMEINAIMHVVETWKQLCFQLKTasseRMHYRYIEFFENKGSAMGCSNPHPHGQA 185
                      8844456666766899***************************************999987766668899************************ PP

  GalP_UDP_transf 178 waeehlp 184
                      w+ +++p
       EPX73380.1 186 WGLDYIP 192
                      ****998 PP

>> DUF4921  Domain of unknown function (DUF4921)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.1   6.5e-05      0.19       4      54 ..       8      58 ..       5      95 .. 0.85
   2 !    7.8   0.0   0.00043       1.3     217     301 ..     157     246 ..     137     280 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 6.5e-05
     DUF4921  4 GtikqvnPftGtevWtvpgrgnrPlsekaeetapleeedreeacafcedrk 54
                   ++ nP+  t v   p rg+rP + ++e++ + e ++ + +c  c  + 
  EPX73380.1  8 HSHRRYNPLNDTWVLCSPHRGKRPWQGEQEDIVKDEVQNYDPSCYLCPGND 58
                556789***************************99999*********8654 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.00043
     DUF4921 217 rnryvrYvavfqnWLkpaGasfdhlhkqlvaiDergvqaeaeiarlrenPnlynel.avdyaa....khnlviaendhavafagfGhryp 301
                 +  + rY+  f n     G s  h h q   +D + ++  +ei+++ +  + y +    dy+     +++ ++ end  v+++ +   +p
  EPX73380.1 157 ERMHYRYIEFFENKGSAMGCSNPHPHGQAWGLDYIPTNVGEEIKNMTKYFKSYGSHlLGDYVKlemeEKQRIVLENDSFVVLVPYWALWP 246
                 455779******************************************999997551457764222267889999999999887766555 PP

>> DcpS_C  Scavenger mRNA decapping enzyme C-term binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       3.4     1e+04      36      52 ..     125     141 ..     122     165 .. 0.58
   2 !   19.6   0.2   3.2e-07   0.00097      10      99 ..     222     317 ..     217     329 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 3.4
                 EEEEEESS---SGGG-- CS
      DcpS_C  36 hllvipkrdikslrdLt 52 
                 h l +p+ +i+ + ++ 
  EPX73380.1 125 HSLTLPRMEINAIMHVV 141
                 55566665555554433 PP

  == domain 2  score: 19.6 bits;  conditional E-value: 3.2e-07
                 TSS-B-EEEE-SSEEEEE-SS-SSSEEEEEEESS---SGGG--TTTTTHHHHHHHHHHHHHHHTT-T-EEEEE--SCCCT-........-S-S--EEE CS
      DcpS_C  10 gkepervvyedekfvvlkDikpkaklhllvipkrdikslrdLtkehlpllkemrekakkvieekynevdaeelrvgvhyqP........svyhlHlHv 99 
                 ++e++r+v+e+++fvvl  + +  ++  l i+k++++sl d++++h++ l+++ +++ +  ++ +  + +    +g+h +P          + +H+H+
  EPX73380.1 222 MEEKQRIVLENDSFVVLVPYWALWPFETLLISKEHLHSLMDFQEKHVQDLASILKQLTTKYDNLF--CTSFPYSMGIHQAPlhgtedecNNSWFHMHF 317
                 67899************************************************999998888877..6788899999999988877766444455555 PP

>> HIT  HIT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       0.9   2.7e+03      40      66 ..     129     155 ..     115     182 .. 0.51
   2 !   15.4   0.0   7.7e-06     0.023       3      66 ..     223     286 ..     221     318 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.9
                 GGGCCHHHHHHHHHHHHHHHHHHHTCT CS
         HIT  40 lhdlteeelakllsavkkvakalqkkf 66 
                 l  ++ +++++++++ k+++ +l++  
  EPX73380.1 129 LPRMEINAIMHVVETWKQLCFQLKTAS 155
                 334444555555555555555555544 PP

  == domain 2  score: 15.4 bits;  conditional E-value: 7.7e-06
                 CC-CCEEEE-SSEEEEE-SS-SSSSEEEEEESSTGCSGGGCCHHHHHHHHHHHHHHHHHHHTCT CS
         HIT   3 eipstvvyeddlvlafldidpkapghlLvipkkhlselhdlteeelakllsavkkvakalqkkf 66 
                 e+++++v+e+d +++++   + +p  +L+i k+hl  l d++e+ +++l s+ k++ ++  + f
  EPX73380.1 223 EEKQRIVLENDSFVVLVPYWALWPFETLLISKEHLHSLMDFQEKHVQDLASILKQLTTKYDNLF 286
                 88999***********************************************999988877655 PP

>> DUF4931  Domain of unknown function (DUF4931)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1     8e-05      0.24      90     126 ..     157     193 ..     134     211 .. 0.81
   2 ?    2.0   0.0     0.036   1.1e+02      70      89 ..     253     272 ..     221     299 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 8e-05
     DUF4931  90 kseeyksvllfknhGPlsGGsikhahmqivGlkeldy 126
                 ++ +y+ + +f n G   G s  h+h q  Gl+++  
  EPX73380.1 157 ERMHYRYIEFFENKGSAMGCSNPHPHGQAWGLDYIPT 193
                 5678999*************************99854 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.036
     DUF4931  70 seehlrellrfgvkhwlele 89 
                 s+ehl++l+ f  kh ++l 
  EPX73380.1 253 SKEHLHSLMDFQEKHVQDLA 272
                 89**********99999885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (367 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       568  (0.0316805); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.36
# Mc/sec: 3079.06
//
Query:       EPX73381.1  [L=384]
Description: NADPH dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.8e-89  300.4   0.0    1.1e-86  291.3   0.0    2.0  1  Oxidored_FMN  NADH:flavin oxidoreductase / NADH oxidase famil


Domain annotation for each model (and alignments):
>> Oxidored_FMN  NADH:flavin oxidoreductase / NADH oxidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  291.3   0.0   5.9e-91   1.1e-86       1     341 [.       9     342 ..       9     343 .. 0.89

  Alignments for each domain:
  == domain 1  score: 291.3 bits;  conditional E-value: 5.9e-91
                   CCCS-EEETTEEESSSEEE----S-TTTTTCS.HHHHHHHHHHHHHHTT-SEEEEEEEESSCCC-SCTTSEE-SSGGGHHHHHHHHHHHHHTT-EEE CS
  Oxidored_FMN   1 kLFkPikignmtLknRivmapmtrlraldkgnvledlaaeyysqraeipvtliiteaafvnpksggfdnapgiwdeeqieewrklteavhengskvv 97 
                   +LFkPikign tL++Riv ap tr ra d+   + dl+++yys ra+ p+tl+ tea+f++p  g ++n pgiw++ q+++w+k+t+avh++gs++ 
    EPX73381.1   9 NLFKPIKIGNHTLNQRIVYAPTTRFRAADDH-TPSDLMLKYYSDRAQVPGTLLTTEATFISPRAGLYPNIPGIWNDKQVQGWKKITDAVHAKGSLMS 104
                   69****************************9.6678************************************************************* PP

                   EEEE--GGGS..SCSTCEC....SS.ESSSSSTTT-.......S...CS-EE--HHHHHHHH.HHHHHHHHHHHHTT-SEEEEEE-CTSHHHHHH-T CS
  Oxidored_FMN  98 vqlwhlGreakseyladqe..vdspsdpvaldaqee......esaeevykkeltkeeikqli.qefveAAkraieAgfDgVeihganGYLlnqFlsp 185
                    qlw lGr    e l++++    sps+   l+++e        ++++v  ++lt+eeik +i +++++AA +a +AgfD Ve+h+a+GYLl+qFl+p
    EPX73381.1 105 CQLWFLGRVGSPELLKKHGldLISPSA---LYESEDskkaaeAAGNPV--RALTEEEIKSIIyEDYKNAAINALNAGFDFVEVHSAHGYLLDQFLQP 196
                   *****************9955456664...444433334777889999..**********99568******************************** PP

                   TT----STTSSSHHHHHHHHHHHHHHHHHHH-SSSEEEEEECE--STTS--HHHH.HHHHHHHCHCCEEEEEEETT-SSSSSTTS-TTTTHHHCCTT CS
  Oxidored_FMN 186 ksnkrtDeygGslenRarFllevvdaVkeavgeervgyRlSpedvvekgldfaet.aqkivllkelekrlkdgkklalvhaaeprkrgagsvrteqe 281
                    sn+rtD ygGs+e+Ra+ +l                   + ++ ++ ++d++   + + ++++el+kr+ dgk+la++ ++epr++g+  v+t+  
    EPX73381.1 197 SSNQRTDSYGGSIEKRAKAVLS----------------PWAKFQGMKAEKDVVHPvTTFSYVVNELQKRADDGKQLAYLSLVEPRVQGNLDVNTSDI 277
                   ****************974432................234455556666666557779999*********************************88 PP

                   .HHHHHHCCCHSSEEEE-SS--SHHHH....HHHHHTTS-SEEEESTHHHH-TTHHHHHHCCTCG CS
  Oxidored_FMN 282 .kntefvkevwkkplitvgriadeeka....aeivaegeadLvamgRefladpdlveklkkglpl 341
                    + ++fvk +wk+p+++ g+++ ++ +    +  v++++++++++ R+f ++pdlve+lkkgl+l
    EPX73381.1 278 vGSNDFVKALWKGPIVQSGNYTYDSPEfkllKADVNNDDRTMIGFSRYFTSNPDLVERLKKGLEL 342
                   8*******************998874311224456779************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (384 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       370  (0.020637); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 2637.41
//
Query:       EPX73382.1  [L=30]
Description: hypothetical protein SOCG_06265 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
      0.014   15.9   0.0      0.014   15.9   0.0    1.0  1  Peptidase_M4  Thermolysin metallopeptidase, catalytic domain


Domain annotation for each model (and alignments):
>> Peptidase_M4  Thermolysin metallopeptidase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.9   0.0   7.8e-07     0.014     109     134 ..       4      29 ..       1      30 [] 0.89

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 7.8e-07
                   EEE-SS.EEEEE---SSSCBSGCGSHH CS
  Peptidase_M4 109 Afwdgs.qmtyGdGdgktftkllvalD 134
                   Afw+++  m++G+G+ ++f+k l +lD
    EPX73382.1   4 AFWNNTlPMMFGKGK-HEFKKKLPQLD 29 
                   9*************9.88899988888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (30 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       214  (0.011936); expected 358.6 (0.02)
Passed bias filter:                      188  (0.0104858); expected 358.6 (0.02)
Passed Vit filter:                         9  (0.00050198); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.23s 00:00:00.57 Elapsed: 00:00:00.39
# Mc/sec: 231.68
//
Query:       EPX73383.1  [L=410]
Description: NADPH dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.1e-94  315.1   0.0    7.2e-94  314.8   0.0    1.0  1  Oxidored_FMN  NADH:flavin oxidoreductase / NADH oxidase famil
  ------ inclusion threshold ------
      0.078   12.7   0.0        2.4    7.8   0.0    2.2  2  Pentaxin      Pentaxin family
       0.21   11.7   0.5        7.6    6.7   0.0    2.9  3  DUF5338       Family of unknown function (DUF5338)


Domain annotation for each model (and alignments):
>> Oxidored_FMN  NADH:flavin oxidoreductase / NADH oxidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  314.8   0.0   1.2e-97   7.2e-94       1     340 [.       9     367 ..       9     369 .. 0.88

  Alignments for each domain:
  == domain 1  score: 314.8 bits;  conditional E-value: 1.2e-97
                   CCCS-EEETTEEESSSEEE----S-TTTTTCS.HHHHHHHHHHHHHHTT-SEEEEEEEESSCCC-SCTTSEE-SSGGGHHHHHHHHHHHHHTT-EEE CS
  Oxidored_FMN   1 kLFkPikignmtLknRivmapmtrlraldkgnvledlaaeyysqraeipvtliiteaafvnpksggfdnapgiwdeeqieewrklteavhengskvv 97 
                   +LFkPi++g++t+++Ri+ ap tr ra+d+   + dl++++ys ra+ p+tl+i+ea+f++p sg ++n pgiw++ ++++w+k+t+avh++gs+++
    EPX73383.1   9 NLFKPITVGKNTINQRIAFAPTTRFRATDDH-TPSDLMLQHYSDRAQTPGTLLISEATFISPRSGLYPNIPGIWNDKHVQGWKKITDAVHAKGSYMA 104
                   69****************************9.6678************************************************************* PP

                   EEEE--GGGS..SCSTCEC....SS.ESSSSSTTT-.....S...CS-EE--HHHHHHHH.HHHHHHHHHHHHTT-SEEEEEE-CTSHHHHHH-TTT CS
  Oxidored_FMN  98 vqlwhlGreakseyladqe..vdspsdpvaldaqee....esaeevykkeltkeeikqli.qefveAAkraieAgfDgVeihganGYLlnqFlspks 187
                    qlw lGr      l++++   +s+s p +  ++ +     + ++   ++lt+eei+ +i +++++AA +a++AgfD Veih+a+GY+l+qFl+p s
    EPX73383.1 105 CQLWFLGRVGSPGLLKKHGldLVSAS-PLYDSEDSKkaaeAADNPI--RALTEEEIHSIIyEDYKNAAINAMNAGFDYVEIHSAHGYMLDQFLQPVS 198
                   **********9999999988855665.3333333333443677788..**********99568********************************** PP

                   ----STTSSSHHHHHHHHHHHHHHHHHHH-SSSEEEEEECE--STTS--HHHH....HHHHHHHCHCCEEEEEEETT-SSSSSTTS-TTTTHHHCC. CS
  Oxidored_FMN 188 nkrtDeygGslenRarFllevvdaVkeavgeervgyRlSpedvvekgldfaet....aqkivllkelekrlkdgkklalvhaaeprkrgagsvrte. 279
                   n+rtD+ygGs+e+Rar +le+vd   e +g+e+v++RlSp + ++ +++  +     + + ++++el+kr+ +gk+la++ ++epr +g    +   
    EPX73383.1 199 NQRTDNYGGSIEKRARMVLEIVDLLSETIGAEKVAIRLSPWTKFQGMKGDEDSvhpiTTFSYVVNELQKRANNGKQLAYLSVVEPRITGGRDIVGLi 295
                   ********************************************99998888778888999**************************9987765544 PP

                   ......TT.HHHHHHCCCHSSEEEE-SS--SHHHHHHHHHT....TS-SEEEESTHHHH-TTHHHHHHCCTC CS
  Oxidored_FMN 280 ......qe.kntefvkevwkkplitvgriadeekaaeivae....geadLvamgRefladpdlveklkkglp 340
                            + ++fvk++wk++++++g+++ +  +   ++     ++++++++ R f ++pdlve+lk+g +
    EPX73383.1 296 gdldisDVvGSNDFVKSLWKGAILQTGNYTYDYPEFSLLKSdvngDDRTMIGFSRFFTSNPDLVERLKEGHE 367
                   444332335777*****************987633333222344599**********************976 PP

>> Pentaxin  Pentaxin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.0    0.0004       2.4     105     151 ..     176     222 ..     155     228 .. 0.89
   2 ?    2.5   0.0     0.017     1e+02     143     174 ..     290     321 ..     285     335 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0004
                 TEEEEEEE-STT--B-SSEEEEESS-BSCTTCTCSGGGB--EEEEEE CS
    Pentaxin 105 GkplvkkslkkgytvgaeasiilGqeqDsyGGkfdasqslvGelsdl 151
                 G  +v   +++gy++++ ++ +  q  D+yGG+ +++  +v e+ dl
  EPX73383.1 176 GFDYVEIHSAHGYMLDQFLQPVSNQRTDNYGGSIEKRARMVLEIVDL 222
                 556777788999*****************************999987 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.017
                 B--EEEEEEEEESS---HHHHHHHHHT-S--- CS
    Pentaxin 143 slvGelsdlnlWdyvLspeeiktvykgatlsg 174
                  +vG ++dl + d+v s++ +k+++kga l++
  EPX73383.1 290 DIVGLIGDLDISDVVGSNDFVKSLWKGAILQT 321
                 579************************99865 PP

>> DUF5338  Family of unknown function (DUF5338)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.042   2.5e+02      33      47 ..     170     184 ..     165     186 .. 0.87
   2 ?   -2.5   0.0      0.97   5.8e+03      12      29 ..     264     281 ..     261     282 .. 0.74
   3 ?    6.7   0.0    0.0013       7.6      25      68 ..     351     393 ..     341     394 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.042
     DUF5338  33 kealkaGyalktiwe 47 
                 ++a++aG+ + +i++
  EPX73383.1 170 INAMNAGFDYVEIHS 184
                 579**********97 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.97
     DUF5338  12 kakrskrrknrvaFLavr 29 
                 +++++ ++ ++ a+L+v 
  EPX73383.1 264 ELQKRANNGKQLAYLSVV 281
                 467777788888999885 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.0013
     DUF5338  25 FLavrkdikealkaGyalktiwehLheegkitisYeTFlrYVkr 68 
                 F   + d  e lk+G++l+   +hL    + +  Y+TF +Y k+
  EPX73383.1 351 FFTSNPDLVERLKEGHELTPYVRHLFYANH-NNGYNTFSNYGKE 393
                 66667899999**************98877.669*******876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (410 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       456  (0.0254337); expected 358.6 (0.02)
Passed bias filter:                      431  (0.0240393); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 3137.07
//
Query:       EPX73384.1  [L=381]
Description: gastricsin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.2e-43  147.4   3.3    7.3e-43  147.2   3.3    1.0  1  Asp              Eukaryotic aspartyl protease
    8.2e-16   58.7   0.0    7.1e-09   36.1   0.0    2.6  2  TAXi_N           Xylanase inhibitor N-terminal
    1.3e-05   25.7   0.0      0.095   13.4   0.0    3.1  2  Asp_protease_2   Aspartyl protease
      0.006   17.1   0.0        2.1    8.9   0.0    2.8  2  gag-asp_proteas  gag-polyprotein putative aspartyl protease
  ------ inclusion threshold ------
       0.14   12.5   0.0         12    6.2   0.0    2.4  2  RVP              Retroviral aspartyl protease


Domain annotation for each model (and alignments):
>> Asp  Eukaryotic aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.2   3.3     2e-46   7.3e-43       2     313 ..      72     378 ..      71     380 .. 0.89

  Alignments for each domain:
  == domain 1  score: 147.2 bits;  conditional E-value: 2e-46
                 EEEEEEETTTTEEEEEEEETT--SEEEEBTTESTSHCHHTSS-B-GGG-TT-EEEEEEEEEECTTSEEEEEEEEEEEEETTEEEEEEEEEEEEEESSHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         Asp   2 YfgeisiGtpeqkftvifDTGSsdlWVpsskckkssackshstydpskSstykkngkslsisYGdgsvsGflsqdtvkvggltvknqefgeatkepgst 100
                 Y++ei+ Gtp+qkf++++DTGS  lW+p + c+ ++  ++ ++ydps+Sst+ ++g+++ isY +g+    +++dt ++g+l+++nq+fg at+++  +
  EPX73384.1  72 YAIEIGFGTPPQKFNLLLDTGSDVLWIPMEGCNGNICNNNPELYDPSQSSTAYNTGETAWISYVSGKTVMDVYTDTFHFGDLQIPNQRFGAATTANMYN 170
                 9*******************************96665566789***********************9999***********************998876 PP

                 HTTSS.SSEEEE-S-GGGSCGGSCCHHHHHHHTTSSSSSEEEEEE-STTSSEEEEEESSEEGGGEEEEEEEEEESS..TSSTEEEEEEEEETTEEE... CS
                 xxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxx... RF
         Asp 101 flaak.fdGiLGlgfkeisveeatpvfdnlvsqglikepvfsvylnreeeeggeivfGgvDeskykGsltyvpvts..kgywqielesvtvggktv... 193
                 ++++  ++GiLG++ ++    +  + f +l+++ li+    s+ +  ++ + +++++G + ++  +  +++ + ++  +  + ++  s+ v +k     
  EPX73384.1 171 TYEVYgTSGILGMARDQW---DGLNSFVDLFNKSLITPATVSFNFA-QNPNDSTLILGETPSELSNRGVIWYDNDNcaDHKFCVTASSMCVVDKDGnen 265
                 6655449*******4443...445668889***************8.99999*********************99988777888888887766655555 PP

                 ...EEEEEEEEEEETTCSSEEEEHHHHHHHHHHHTTEEEETTCEEEEETTGGGGSEEEEEEETTEEEEEEGGGGEEEESSSTTSEEEESE...EECCTS CS
                 ...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxx RF
         Asp 194 ...lcssgcqailDtGTsllalptsivekiakaigakksesegeyvvdCdslsslpdisftiggakitvpvselvlkeeeseesqCilgl...vseeeg 286
                     ++++++a+lDtG+++  ++t++ +++++ +g +++ s     + Cd     pdisf+++g+k++ +v+++  +++    + C ++     s +++
  EPX73384.1 266 cvlESDHTYSALLDTGATINLVDTQVGAALNRFLGVSEDGS-----MPCDG----PDISFVLNGKKFQWSVNDYATEDN----GVCWSNWdvdNSLDGT 351
                 666678899***************************98888.....99**6....*******************99888....69**999877666778 PP

                 SSEEEEHHHHTTEEEEEETTTTEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         Asp 287 dlwiLGdvFlrsayvvfdldnnrvglA 313
                  +  +Gd F  ++y+  d+dnn+vgl 
  EPX73384.1 352 YQFNFGDAFFTNIYTSLDYDNNKVGLG 378
                 8889*********************97 PP

>> TAXi_N  Xylanase inhibitor N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.1   0.0     2e-12   7.1e-09       1      52 [.      72     124 ..      72     130 .. 0.83
   2 !   20.2   0.0   1.5e-07   0.00054      82     177 ..     131     224 ..     124     225 .. 0.83

  Alignments for each domain:
  == domain 1  score: 36.1 bits;  conditional E-value: 2e-12
      TAXi_N   1 YlvsisiGtppqplklvvDtGsdltWvqCkpcka.cssqkkpvfdpsksstyk 52 
                 Y ++i+ Gtppq+++l++DtGsd++W+  + c+    +++ +++dps+sst  
  EPX73384.1  72 YAIEIGFGTPPQKFNLLLDTGSDVLWIPMEGCNGnICNNNPELYDPSQSSTAY 124
                 99***************************999976445556677777777754 PP

  == domain 2  score: 20.2 bits;  conditional E-value: 1.5e-07
      TAXi_N  82 eisygadgssssGvlatdtltlsstdgksvkvpnlvfGCgk..snlgglaa..gadGilGLGrgk....lSlvsqlaskgslgnkFsyCLssssssssg 172
                  isy   g ++  ++ tdt+++     +  ++pn  fG ++  ++ ++  +  g++GilG++r +     S+v+ ++++ ++ +++s  +  +++ + +
  EPX73384.1 131 WISYV-SG-KTVMDVYTDTFHF-----GDLQIPNQRFGAATtaNMYNTY-EvyGTSGILGMARDQwdglNSFVDLFNKSLITPATVSFNF--AQNPNDS 219
                 67885.55.8999*********.....889*********9985333333.3368*********9877779********99**********..7777888 PP

      TAXi_N 173 vlffG 177
                  l++G
  EPX73384.1 220 TLILG 224
                 88888 PP

>> Asp_protease_2  Aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0    0.0011       3.8       8      77 ..      83     164 ..      74     184 .. 0.52
   2 !   13.4   0.0   2.7e-05     0.095       7      31 ..     271     295 ..     265     308 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0011
  Asp_protease_2   8 kpvrfllDTGasttlispelaeklglkvreselt.vrvsgagge.vkarlvrlds...........lklggltlknvpalvld 77 
                     +++++llDTG++++ i+ e  +    ++ ++ ++  ++s+a  +  +a +    s           + +g+l+++n+++  + 
      EPX73384.1  83 QKFNLLLDTGSDVLWIPMEGCNGNICNNNPELYDpSQSSTAYNTgETAWI-SYVSgktvmdvytdtFHFGDLQIPNQRFGAAT 164
                     6899************9887766644333332221444555443122222.11111223333333366666666666655555 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 2.7e-05
  Asp_protease_2   7 GkpvrfllDTGasttlispelaekl 31 
                     ++++++llDTGa+ +l+++++ ++l
      EPX73384.1 271 DHTYSALLDTGATINLVDTQVGAAL 295
                     679*****************98887 PP

>> gag-asp_proteas  gag-polyprotein putative aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0      0.01        37       8      30 ..      83     105 ..      81     184 .. 0.60
   2 !    8.9   0.0    0.0006       2.1       7      31 ..     271     295 ..     267     306 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.01
                      EEEEEEEETT-SS-EEEHHHHHH CS
  gag-asp_proteas   8 kpvkflvDTGAsstiiseelaer 30 
                      +++++l+DTG +   i++e  + 
       EPX73384.1  83 QKFNLLLDTGSDVLWIPMEGCNG 105
                      57899********9999987763 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0006
                      TEEEEEEEETT-SS-EEEHHHHHHT CS
  gag-asp_proteas   7 gkpvkflvDTGAsstiiseelaerl 31 
                      ++++ +l+DTGA+  ++ +++  +l
       EPX73384.1 271 DHTYSALLDTGATINLVDTQVGAAL 295
                      68999**********9999987776 PP

>> RVP  Retroviral aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0     0.023        81      14      30 ..      83      99 ..      68     112 .. 0.80
   2 ?    6.2   0.0    0.0034        12      16      30 ..     274     288 ..     260     292 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.023
                EEEEEEE-TTBSSEEEE CS
         RVP 14 kyieallDtGAdatvis 30
                ++++ llDtG d+  i+
  EPX73384.1 83 QKFNLLLDTGSDVLWIP 99
                4899********87776 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.0034
                 EEEEE-TTBSSEEEE CS
         RVP  16 ieallDtGAdatvis 30 
                   allDtGA++ ++ 
  EPX73384.1 274 YSALLDTGATINLVD 288
                 689*******98876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (381 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       413  (0.0230353); expected 358.6 (0.02)
Passed bias filter:                      303  (0.0169); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.46
# Mc/sec: 2464.34
//
Query:       EPX73385.1  [L=117]
Description: hypothetical protein SOCG_01134 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.6e-09   36.2   0.1    9.3e-09   35.9   0.1    1.1  1  GPI-anchored  Ser-Thr-rich glycosyl-phosphatidyl-inositol-anc


Domain annotation for each model (and alignments):
>> GPI-anchored  Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.9   0.1   5.2e-13   9.3e-09       2      91 ..      23     110 ..      22     112 .. 0.93

  Alignments for each domain:
  == domain 1  score: 35.9 bits;  conditional E-value: 5.2e-13
  GPI-anchored   2 sPssgevvtagkpvtitWkdsgtdpgtvtlvLcagssnnlksvktiasgiknsdgsytwtvpaslesggaYflqivsesne.giynySdrF 91 
                   +Ps  e++t  +  t+tW++++tdp+  +l+L +      +++ +  s  + sdgsyt +  ++ + +g+Y +++ + +n  +iy++S+ F
    EPX73385.1  23 TPSPFEEWTTCEDHTVTWDAVDTDPKIADLYLSNYIR--YPPINKFLSRLSVSDGSYTADT-KGWPIDGGYRINMRNPDNFdEIYAQSEEF 110
                   6888999***************************999..899999999************9.8899999*******888888********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       270  (0.0150594); expected 358.6 (0.02)
Passed bias filter:                      252  (0.0140554); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.28s 00:00:00.72 Elapsed: 00:00:00.46
# Mc/sec: 764.15
//
Query:       EPX73386.1  [L=512]
Description: glycerophosphodiester transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      2e-28   99.5  35.4    6.9e-20   71.3  12.2    2.1  2  Sugar_tr         Sugar (and other) transporter
    4.5e-16   58.7  46.5    1.7e-10   40.4  24.1    2.1  2  MFS_1            Major Facilitator Superfamily
  ------ inclusion threshold ------
       0.11   12.3   0.3        1.3    8.8   0.0    2.5  2  Collectrin       Renal amino acid transporter
        1.3    9.0   4.6       0.41   10.6   1.0    2.0  2  Abhydrolase_9_N  Alpha/beta-hydrolase family N-terminus
        1.9    8.3  12.0       0.19   11.6   0.5    3.5  4  VIT1             VIT family


Domain annotation for each model (and alignments):
>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.3  12.2   1.9e-23   6.9e-20      11     200 ..      82     276 ..      70     282 .. 0.86
   2 !   36.2  14.2   8.6e-13   3.1e-09     234     443 ..     277     480 ..     266     489 .. 0.85

  Alignments for each domain:
  == domain 1  score: 71.3 bits;  conditional E-value: 1.9e-23
                 HHHHHHHCGGGTHHHHHHHHTSTT--SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTT.....SS-TG CS
    Sugar_tr  11 lfgYdtgvigafltllkfaknfglsksksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgk.....nsvev 104
                   gY +  ig+++t+lk+++    +++ks+++        i  i++vG ++G+l +g+ +d+fGRk+++++a++l++ +++l+a a g+      ++ +
  EPX73386.1  82 SDGYCSNCIGTVMTILKKLYPKETTNNKSMQD--------IGMIAYVGTVVGQLSFGWYSDFFGRKNGMITATLLLIMSTALCAGAYGYhgsinGMLSA 172
                 45777777888888888777777777777666........667899*****************************************99****99**** PP

                 GGGGHHHHHHHHHHHHHHHHHHHHTTS...-SCCH.HHHHHHHHHHHHHHHHHHHHHHHHH.HTSS-...TTHHHHHHHCCHHHHHHHHHHGGGS---H CS
    Sugar_tr 105 livgRvlvGigvGlasvlvPmyisEiA...pkklR.galvslyqlaitfGilvaaifglgl.nktsn...adgwrillglqlvpallllilllflPESP 195
                 liv R+++G+g+G+++ + ++ +sE++    + +R g ++ ++ +ai++G +++a++ +++   +++   +  wri +gl +v++++lli++l + E  
  EPX73386.1 173 LIVYRFFLGVGIGAEYPCGSVAASENSslmNTGKRhGSFIFVTGSAIALGYVLGAFIPYIVvCIFTDhhlRAVWRISIGLGAVIPIILLIVRLPMKENG 271
                 ***************************777566777999999******************954444489999*******************99888877 PP

                 HHHHH CS
    Sugar_tr 196 rylve 200
                  +l +
  EPX73386.1 272 VFLKS 276
                 77655 PP

  == domain 2  score: 36.2 bits;  conditional E-value: 8.6e-13
                 HHH.....HTTHHHHSH...HHHHHHHHHHHHHHTTHHHHHHHTTTHHHHSS-THH.....HHHHHHHHHHHHHHHHHHHHHHHHS-SHHHHHHHHHHH CS
    Sugar_tr 234 eqeeekaswkellssktvrqrlligvvlqifqqltGinaimyysptifenlglsks.....llvtiivgvvnfvatfvaiflvdrfGRRtllllGaagm 327
                 ++  +k+ w  +++      r+li++v++++  l+  na+  ys+ti + +  s+      ++++ ++       +  +  + d +G + +l+ G++ +
  EPX73386.1 277 KVPYSKIPWLIVFRLY--GARFLIICVVWFTYDLSS-NAFGLYSSTIVSRVLPSNAsiaksFAWNTLINSFSLPGSWLGCIFADIIGPKWCLIAGLILQ 372
                 4444578899999995..589************999.************9999999888889999999999999999999******************* PP

                 HHHHHHHH..HHHHTTSS...CHHHHHHHHHHHHHHHTTTTHHHHHHHHHHSHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHT-HHHHHHHHHH CS
    Sugar_tr 328 aicfvilgivalllvakskaasivaivfialfialfalgwgpvpwvlvsElfpqsvRskalaiavavnwlanflisllfpiiteaigggyvflvfagla 426
                  +  ++++  ++ + + +  a++++i +i+l   l ++g+g  + ++++ ++p+ +R++ + +a+av     +   ++  +  ++++   +f+   g+a
  EPX73386.1 373 GVIGLFMS-GFYNQLTHH-IAGFCVIYGIFL--TLGEFGPGASIGLMAAKTSPTPIRGIYYGLAAAVGKCGAITGVYV--FGGNKVQ--TYFYAASGIA 463
                 *******9.888888885.778887777765..599999*****************************9887655544..4455555..899999**** PP

                 HHHHHHHHHHS--STT- CS
    Sugar_tr 427 vlfiifvfffvpetkgr 443
                 ++++i vfff+p+    
  EPX73386.1 464 LFVAILVFFFLPHLSQT 480
                 ************98765 PP

>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.4  24.1   4.8e-14   1.7e-10      24     251 ..     103     346 ..      76     355 .. 0.62
   2 !   17.6  23.9   3.9e-07    0.0014      34     175 ..     335     475 ..     296     497 .. 0.74

  Alignments for each domain:
  == domain 1  score: 40.4 bits;  conditional E-value: 4.8e-14
       MFS_1  24 aedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalg.lllll.fa.....sslw.lllvlrvlqGlgagalfpagaaliadwf 114
                 +e+   +  +++ +  + ++g++v++l +G+ sd fGr+  ++++ ll++ + +l++  ++     +++  +l+v r++ G+g ga +p g +++++ +
  EPX73386.1 103 KETT--NNKSMQDIGMIAYVGTVVGQLSFGWYSDFFGRKNGMITATLLLIMStALCAGaYGyhgsiNGMLsALIVYRFFLGVGIGAEYPCGSVAASENS 199
                 3332..34445557789999********************77777777777746666664344556778879*************************** PP

       MFS_1 115 pkeergraigllsagfslGailgpllggllasslg...........Wravfyilaivsllafvlfllllpeepperkrkspkeeekgtgpaplvpawka 202
                 + ++ g+  g +   ++ +++lg++lg+++   +            Wr +  + a++ +++     l ++ + +e++ +  k +    +p + +p w +
  EPX73386.1 200 SLMNTGKRHGSFIFVTGSAIALGYVLGAFIPYIVVciftdhhlravWRISIGLGAVIPIIL-----LIVRLPMKENGVFL-KSK----VPYSKIP-WLI 287
                 ***9999999999999999999999999666444466668885555555555555555555.....33344444444443.333....5777777.777 PP

       MFS_1 203 llkdp........vlwillialllfffgfsg.......lltllplylqevlglsglllagllla 251
                 +++          v+w + + l +++fg+++       l +     + + + ++  l+++ ++ 
  EPX73386.1 288 VFRLYgarfliicVVW-FTYDLSSNAFGLYSstivsrvLPSNAS--IAKSFAWN-TLINS-FSL 346
                 7776633222222224.444444444444444442222222222..37777777.45555.233 PP

  == domain 2  score: 17.6 bits;  conditional E-value: 3.9e-07
       MFS_1  34 igllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllll.f..a..sslw.lllvlrvlqGlgagalfpagaaliadwfpkeergraigll 126
                 + + + + + +++ +s ++  ++d +G++++l++gl+l ++ +l+++ f     +++  + ++  ++  lg+ +  ++++ ++a+ +p + rg ++gl+
  EPX73386.1 335 FAWNTLINS-FSLPGSWLGCIFADIIGPKWCLIAGLILQGVIGLFMSgFynQltHHIAgFCVIYGIFLTLGEFGPGASIGLMAAKTSPTPIRGIYYGLA 432
                 334333333.366777788888********************777777755156999999************999999999****************** PP

       MFS_1 127 sagfslGailg.pllggllasslgWravfyilaivsllafvlfllllpee 175
                 +a   +Gai g +++gg  +     +  fy++ +++l++++l++++l  +
  EPX73386.1 433 AAVGKCGAITGvYVFGGNKV-----QTYFYAASGIALFVAILVFFFL--P 475
                 ***********666666555.....8889999999999988855554..3 PP

>> Collectrin  Renal amino acid transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.0   0.00035       1.3      92     139 ..      33      80 ..      24      84 .. 0.91
   2 ?   -0.1   0.3      0.19   6.9e+02     116     140 ..     275     299 ..     272     308 .. 0.68

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00035
  Collectrin  92 rnrineaflLddktLeflgilptLappveppvtiWlivfgvvmgvvvv 139
                 +++ n+a +L+++ ++f + ++ +++  +++ + W   f vv++ v++
  EPX73386.1  33 KSKSNSAEELKNEKIDFFDSSSDIENESKNSASQWTNFFEVVICGVAL 80 
                 66789**************************************97765 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.19
  Collectrin 116 appveppvtiWlivfgvvmgvvvvg 140
                 +++v ++  +Wlivf    +  +++
  EPX73386.1 275 KSKVPYSKIPWLIVFRLYGARFLII 299
                 5566677889*****8655544444 PP

>> Abhydrolase_9_N  Alpha/beta-hydrolase family N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   1.0   0.00011      0.41      16     135 ..     214     332 ..     212     346 .. 0.80
   2 ?   -3.1   0.1       1.8   6.4e+03      57      57 ..     461     461 ..     425     482 .. 0.54

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00011
  Abhydrolase_9_N  16 vsGlsaaiGYglGvllawlvrrllrlpepsrrvrrrlrlalavvalvvllvalvlaarwQrelralmgaeplgaaeyllvllvallvfalllll 109
                      v+G ++a+GY+lG+++  +v  +    +   r+ +r+ + l +v+ ++ll++ +  +++   l++ +  +++ ++ ++++  + +l++ +++ +
       EPX73386.1 214 VTGSAIALGYVLGAFIPYIVVCIF--TDHHLRAVWRISIGLGAVIPIILLIVRLPMKENGVFLKSKVPYSKIPWLIVFRLYGARFLIICVVWFT 305
                      7999****************8886..67778888888888888888888888888888888888888888888888888888888888888888 PP

  Abhydrolase_9_N 110 grllralvrlla.rllgrvlprrvaav 135
                        l + ++ l + + ++rvlp+ ++ +
       EPX73386.1 306 YDLSSNAFGLYSsTIVSRVLPSNASIA 332
                      888888888888677888888877654 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 1.8
  Abhydrolase_9_N  57 a 57 
                       
       EPX73386.1 461 G 461
                      2 PP

>> VIT1  VIT family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.58   2.1e+03     168     192 ..      71      95 ..      63     102 .. 0.75
   2 ?    1.8   1.2     0.051   1.8e+02     165     209 ..     114     159 ..      85     164 .. 0.73
   3 ?   11.6   0.5   5.3e-05      0.19     135     175 ..     213     255 ..     191     264 .. 0.72
   4 ?   -0.5   0.1      0.25   9.1e+02     136     169 ..     459     492 ..     445     497 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.58
        VIT1 168 vsiavtllalllfGavkalltgssk 192
                 + ++++++al+  G+ +++++ +  
  EPX73386.1  71 FEVVICGVALISDGYCSNCIGTVMT 95 
                 5678999999999999888876655 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.051
        VIT1 165 alvvsiavtllalllfGavkalltgssklvsalrmlli.GalAaaa 209
                   +++ + t++  l fG+ ++++++++ ++ a   l++ +al+a+a
  EPX73386.1 114 IGMIAYVGTVVGQLSFGWYSDFFGRKNGMITATLLLIMsTALCAGA 159
                 4556667899999***************666655555515555543 PP

  == domain 3  score: 11.6 bits;  conditional E-value: 5.3e-05
        VIT1 135 lkaAlssalsfliGgliPllpylfve..svglalvvsiavtll 175
                 +  + ++al++++G++iP + + +++  +   + ++si++ ++
  EPX73386.1 213 FVTGSAIALGYVLGAFIPYIVVCIFTdhHLRAVWRISIGLGAV 255
                 56899****************9776634455555666555444 PP

  == domain 4  score: -0.5 bits;  conditional E-value: 0.25
        VIT1 136 kaAlssalsfliGgliPllpylfvesvglalvvs 169
                  ++++ +++ l++ ++P l+  +ve+ ++ +v +
  EPX73386.1 459 ASGIALFVAILVFFFLPHLSQTCVEDEDERFVQA 492
                 5899999999999999999999998766666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (512 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       968  (0.0539907); expected 358.6 (0.02)
Passed bias filter:                      540  (0.0301188); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.65u 0.29s 00:00:00.94 Elapsed: 00:00:00.45
# Mc/sec: 3392.17
//
Query:       EPX73387.1  [L=281]
Description: hypothetical protein SOCG_01136 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
       0.73    9.6   4.6          1    9.2   4.6    1.3  1  FA_desaturase  Fatty acid desaturase


Domain annotation for each model (and alignments):
>> FA_desaturase  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   4.6   5.6e-05         1      95     178 ..     115     194 ..      95     227 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 5.6e-05
  FA_desaturase  95 yllrlllgllvlg.wllalvlglwlrrlarrrapsksrrrkwrllawlllllawlglwlalllllglall..lwlvplllllfllal 178
                     +l++ l    +  ++++     +++ +   ++++k++ + w  ++++++l+  +++++++l++ +l++   + l+pl+l ++++ +
     EPX73387.1 115 LRLGWCLNGSIILnFIFS-----YKYLVPFIKESMKESVWLWFQITVAVVLV--IATFYMFLFFCSLLVDfiVTLIPLVLSGTTMLV 194
                    444444444444424333.....66666666777777775566666666666..888888888888888888999999999887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (281 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1032  (0.0575604); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 1954.05
//
Query:       EPX73388.1  [L=249]
Description: hypothetical protein SOCG_01137 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0015   18.3   2.3     0.0034   17.2   2.3    1.7  1  WTF        WTF protein
  ------ inclusion threshold ------
      0.023   13.7   4.1      0.031   13.3   4.1    1.1  1  FecCD      FecCD transport family
      0.078   13.3   0.6        1.7    9.0   0.0    2.5  2  Orf78      Orf78 (ac78)
       0.69    9.4   4.8       0.23   10.9   0.6    2.1  2  Flp1_like  Putative Flagellin, Flp1-like, domain
        7.1    5.3   6.9         64    2.1   6.9    2.0  1  DUF2207    Predicted membrane protein (DUF2207)


Domain annotation for each model (and alignments):
>> WTF  WTF protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   2.3   9.4e-07    0.0034      37     152 ..      27     150 ..       1     217 [. 0.53

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 9.4e-07
         WTF  37 eeegaLPpysdiakl........snsasselinPnthrenetsrshdnsspfllk...........llisvis..isvlnvtavCvlklkdaifGkvey 114
                   eg+ Ppys   k+        s   s+el      ++n  s+ ++n      k            +i +i   ++++ +    v ++ ++++G +  
  EPX73388.1  27 SSEGTPPPYSASNKFinlemadgSAQNSAEL-----SENNIRSDPSPN------KqwwktpvigtvTIITIIYniVFLVIIFGYNVSPYSNTFYGLAGS 114
                 46899999**999983433322222222222.....222223333344......222233433333222222200222233334556777777787776 PP

         WTF 115 slvlgifcavcallfilltyfyetWtkavkdgvkvtvi 152
                 s+  g  c ++  ++ +   +y    +a+k+++k +  
  EPX73388.1 115 SI--GSICTSLLAILYICPEWYRQAGRATKKCIKKSGR 150
                 66..8889877655555555699999999999995533 PP

>> FecCD  FecCD transport family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   4.1   8.5e-06     0.031      86     196 ..      90     208 ..      74     213 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 8.5e-06
       FecCD  86 gavlallll...lgslslfalplaaflgallalllvllla.....rkrkgasplkliLaGiavsallsaltsllllllneealesilfwllGslsgasw 176
                 +++l+++++   ++ +++f+ ++ + +g+++++ll +l       r+ ++a+++ +  +G a++ ++ a+ ++l++l++ + +      l+G +++++ 
  EPX73388.1  90 IVFLVIIFGynvSPYSNTFYGLAGSSIGSICTSLLAILYIcpewyRQAGRATKKCIKKSGRAIKKFTPAVCKALIILISLNGVGGGALKLSGGFEYIHS 188
                 3444555556655555555556666677777755444333599988888888888999***************************************** PP

       FecCD 177 skvllllvllllllllllll 196
                 + vl++l++l ++l++ll+ 
  EPX73388.1 189 TAVLVVLAVLNICLFVLLVR 208
                 **************999976 PP

>> Orf78  Orf78 (ac78)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.0   0.00046       1.7      42      89 ..      55      96 ..      18     107 .. 0.64
   2 ?    1.5   0.7       0.1   3.6e+02      64      80 ..     190     206 ..     183     214 .. 0.64

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00046
       Orf78 42 saaeknditekesnaaekaqalnillisllavvcvlvllyviyYfvil 89
                +  ++n+i+      +    +++   + ++  v+++ ++y i++ vi+
  EPX73388.1 55 AELSENNIR------SDPSPNKQWWKTPVIGTVTIITIIYNIVFLVII 96
                222333333......333334444445667777777788888888876 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.1
       Orf78  64 nillisllavvcvlvll 80 
                  +l++ ++  +c++vll
  EPX73388.1 190 AVLVVLAVLNICLFVLL 206
                 45555556666666665 PP

>> Flp1_like  Putative Flagellin, Flp1-like, domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.6   6.4e-05      0.23       9      28 ..      78      97 ..      76     110 .. 0.93
   2 ?   -0.9   0.3      0.31   1.1e+03      19      26 ..     190     197 ..     184     198 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 6.4e-05
   Flp1_like  9 vgvVEiiLIivVligLvliF 28
                +g+V ii Ii  ++ Lv+iF
  EPX73388.1 78 IGTVTIITIIYNIVFLVIIF 97
                79****************** PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.31
   Flp1_like  19 vVligLvl 26 
                 +Vl++L++
  EPX73388.1 190 AVLVVLAV 197
                 78898887 PP

>> DUF2207  Predicted membrane protein (DUF2207)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   6.9     0.018        64     366     445 ..      64     142 ..       2     211 .. 0.68

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.018
     DUF2207 366 k...kergyfdkkgkkklkklsalglgliilglilillallllvlllvfllilllillliaiivlllfsrllgrr.teeGaell 445
                 +    +++++++     + ++ ++ +++ i++l++i++ +++ ++ ++f+++ +  ++ i+  +l+++++  + +  + G++ +
  EPX73388.1  64 SdpsPNKQWWKTP---VIGTVTIITIIYNIVFLVIIFGYNVSPYS-NTFYGLAGSSIGSICTSLLAILYI-CPEWyRQAGRATK 142
                 4444445555554...56666666677777777777777777666.888888888888888888888754.4443266665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       924  (0.0515366); expected 358.6 (0.02)
Passed bias filter:                      578  (0.0322383); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.54u 0.30s 00:00:00.84 Elapsed: 00:00:00.48
# Mc/sec: 1557.33
//
Query:       EPX73389.1  [L=221]
Description: hypothetical protein SOCG_01138 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       464  (0.0258799); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 1539.06
//
Query:       EPX73390.1  [L=382]
Description: NADPH dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-90  304.0   0.0    2.5e-88  296.6   0.0    2.0  1  Oxidored_FMN  NADH:flavin oxidoreductase / NADH oxidase famil


Domain annotation for each model (and alignments):
>> Oxidored_FMN  NADH:flavin oxidoreductase / NADH oxidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  296.6   0.0   1.4e-92   2.5e-88       1     341 [.       9     340 ..       9     341 .. 0.91

  Alignments for each domain:
  == domain 1  score: 296.6 bits;  conditional E-value: 1.4e-92
                   CCCS-EEETTEEESSSEEE----S-TTTTTCS.HHHHHHHHHHHHHHTT-SEEEEEEEESSCCC-SCTTSEE-SSGGGHHHHHHHHHHHHHTT-EEE CS
  Oxidored_FMN   1 kLFkPikignmtLknRivmapmtrlraldkgnvledlaaeyysqraeipvtliiteaafvnpksggfdnapgiwdeeqieewrklteavhengskvv 97 
                   +LF+ i++gnmtL++Ri+ ap trlra+d+   + dl++++ys ra+ p+tl+i+ea+ v+   g ++n pgiw++ q+++w+k+t+avh++gs+++
    EPX73390.1   9 NLFNQIQVGNMTLNHRIAFAPTTRLRATDDH-TPSDLMLQHYSDRAQTPGTLLISEATLVSLRAGLYPNIPGIWNDRQVQAWKKITDAVHAKGSYMA 104
                   69****************************9.6678************************************************************* PP

                   EEEE--GGGS..SCSTCEC....SS.ESSSSSTTT-....S...CS-EE--HHHHHHHH.HHHHHHHHHHHHTT-SEEEEEE-CTSHHHHHH-TTT- CS
  Oxidored_FMN  98 vqlwhlGreakseyladqe..vdspsdpvaldaqee...esaeevykkeltkeeikqli.qefveAAkraieAgfDgVeihganGYLlnqFlspksn 188
                    qlw +Gr    e l++++   +sps+  + +++++    ++++   ++lt+eei+ +i +++++AA +a++AgfD Ve h+a+GYLl+qFl+p  n
    EPX73390.1 105 CQLWFAGRVGSPELLKKHGldLVSPSALYESEDSKKaaeAAGNPI--RALTEEEIQSIIyDDYKNAAINAMNAGFDCVELHSAHGYLLDQFLQPAAN 199
                   ****************99977778885554444444777888999..**********99578*********************************** PP

                   ---STTSSSHHHHHHHHHHHHHHHHHHH-SSSEEEEEECE--STTS--HHHH....HHHHHHHCHCCEEEEEEETT-SSSSSTTS-TTTTHHHCCTT CS
  Oxidored_FMN 189 krtDeygGslenRarFllevvdaVkeavgeervgyRlSpedvvekgldfaet....aqkivllkelekrlkdgkklalvhaaeprkrgagsvrteqe 281
                   +rtD+ygGs+enRar lle+vd   + +g+e+v++RlSp   ++ ++ + +t    + + ++++el+kr+ +gk+la++ ++epr            
    EPX73390.1 200 QRTDNYGGSIENRARLLLEIVDLLSDTIGAEKVAIRLSPWAKFQGMKAEKDTvhpiTTFSYVVNELQKRANKGKQLAYLSVVEPR------------ 284
                   *************************************************99999988999***********************43............ PP

                   HHHHHHCCCHSSEEEE-SS--SHHHHHHHHHT....TS-SEEEESTHHHH-TTHHHHHHCCTCG CS
  Oxidored_FMN 282 kntefvkevwkkplitvgriadeekaaeivae....geadLvamgRefladpdlveklkkglpl 341
                           +wk+++++ g+++ ++ + + ++     +++++va+ R+f ++pdlv++lk+gl+l
    EPX73390.1 285 --------LWKGNVLQGGNYTYDKPEFKSLKAdvdgDNRTMVAFSRYFTSNPDLVKRLKEGLEL 340
                   ........6777788878776655332222222334899**********************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       406  (0.0226449); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.30s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 2546.67
//
Query:       EPX73391.1  [L=134]
Description: NADPH-hemoprotein reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.8e-20   71.5   0.1    6.6e-20   71.0   0.1    1.2  1  Cyt-b5    Cytochrome b5-like Heme/Steroid binding domain


Domain annotation for each model (and alignments):
>> Cyt-b5  Cytochrome b5-like Heme/Steroid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.0   0.1   3.7e-24   6.6e-20       1      73 [.      60     131 ..      60     132 .. 0.97

  Alignments for each domain:
  == domain 1  score: 71.0 bits;  conditional E-value: 3.7e-24
                 EHHHHTTTECTTEEEEEETTEEEECTTTCCCSTTCSHHHHTTTTSBBHHHHHHTTGGCHHHHHHHHGGEEEEE CS
      Cyt-b5   1 tleelskhngkndlwvairgkVYDvskflskhpGgesailkyaGkDateafksvvhsekdaekllkkylvGkl 73 
                 t+eel+khn+k+d+w+a+rgkVY+v+ ++ +hp g++ i k+ G Dat+   +  h + + e++l++++vG l
  EPX73391.1  60 TMEELKKHNTKDDCWIAVRGKVYNVTAYAPYHPDGAKKIFKHSGIDATKQYMKA-HADVNEEEMLRTCYVGPL 131
                 789***************************************************.999999**********87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1247  (0.0695521); expected 358.6 (0.02)
Passed bias filter:                      569  (0.0317363); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.44
# Mc/sec: 916.91
//
Query:       EPX73392.1  [L=266]
Description: hypothetical protein SOCG_01141 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        1.6    6.9   7.2          2    6.6   7.2    1.1  1  DUF2070   Predicted membrane protein (DUF2070)


Domain annotation for each model (and alignments):
>> DUF2070  Predicted membrane protein (DUF2070)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   7.2   0.00011         2      75     176 ..      81     193 ..      61     210 .. 0.53

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.00011
     DUF2070  75 alltelivviisllaillsall...qalvllalvlslalvfalrllvlvav...sdesllkavlpaliqpllailllvly......fspesflllllls 161
                 + ++++++ +++l+ i+  + +   ++ ++    +s+ ++f++ l +lv++    ++  +++ + al   +l ++ + +y      ++ e++  l+l++
  EPX73392.1  81 MTIITILYNLVFLAIIF-GYKVspySRAFYGLAGVSIGSIFIFLLTILVTYpewYRQAGFNMCVSALYVCFLNVPGFAMYytakkiIQFEKINNLFLYV 178
                 22333333332222222.222245444445555556888888888888777222344455555666666666666666667777765455555555555 PP

     DUF2070 162 lifalavylfivvvd 176
                 + f+ +v+++++ ++
  EPX73392.1 179 VCFVDFVLFLFISMN 193
                 555544444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1086  (0.0605723); expected 358.6 (0.02)
Passed bias filter:                      590  (0.0329076); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 1883.14
//
Query:       EPX73393.1  [L=218]
Description: hypothetical protein SOCG_01142 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
       0.29   10.9   3.9       0.38   10.5   3.9    1.2  1  FA_desaturase  Fatty acid desaturase
       0.74    9.3   4.6        1.1    8.7   4.6    1.2  1  DUF1129        Protein of unknown function (DUF1129)
        6.2    6.1   8.0        8.9    5.6   8.0    1.2  1  TMEM43         Transmembrane protein 43


Domain annotation for each model (and alignments):
>> FA_desaturase  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   3.9   6.4e-05      0.38      94     178 ..     114     194 ..      94     208 .. 0.67

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 6.4e-05
  FA_desaturase  94 ryllrlllgllvlg.wllalvlglwlrrlarrrapsksrrrkwrllawlllllawlglwlalllllglall..lwlvplllllfllal 178
                    + +l++ l    +  ++++     +++ +   ++++k++ + w  ++++++l+  +++++++l++ +l++   + l+pl+l ++++ +
     EPX73393.1 114 ALRLGWCLNGSIILnFIFS-----YKYLVPFIKESMKESVWLWFQITVAVVLV--IATFYMFLFFCSLLVDfiVTLIPLVLSGTTMLV 194
                    4444444444444424333.....66666666777777775566666666666..888888888888888888999999999887655 PP

>> DUF1129  Protein of unknown function (DUF1129)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   4.6   0.00018       1.1     127     196 ..     129     205 ..     119     211 .. 0.56

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00018
     DUF1129 127 mvlvyrlltrekkkkkrpplwkrllilllllvvw..lvlft.....lvallpaviNpvLpplvliiigviafvvryy 196
                 +++ y++l +  k++ ++++w  + i++++++v+  + +f+     lv ++ + i  vL+    ++ g+ +f +  +
  EPX73393.1 129 FIFSYKYLVPFIKESMKESVWLWFQITVAVVLVIatFYMFLffcslLVDFIVTLIPLVLSGTTMLVSGISSFLSSLF 205
                 67788999998666666666654444444444331033333001113444555666666666666666666665555 PP

>> TMEM43  Transmembrane protein 43
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   8.0    0.0015       8.9     177     241 ..     141     205 ..     124     214 .. 0.82

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0015
      TMEM43 177 keksenklltwllRllGfllmflglllllsplsvlvslipllgelvglglalvalllslslsllv 241
                 ke+ +++++ w+   ++++l++ +++++l   s lv++i  l  lv  g+ ++ + +s  ls+l 
  EPX73393.1 141 KESMKESVWLWFQITVAVVLVIATFYMFLFFCSLLVDFIVTLIPLVLSGTTMLVSGISSFLSSLF 205
                 677889999****************************9999999998888855554544444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1002  (0.0558871); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 1623.41
//
Query:       EPX73394.1  [L=143]
Description: hypothetical protein SOCG_16324 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.7e-21   74.3   0.8      8e-21   74.1   0.8    1.1  1  HSP20       Hsp20/alpha crystallin family
    2.1e-12   46.4   0.0    3.6e-12   45.7   0.0    1.4  1  ArsA_HSP20  HSP20-like domain found in ArsA
     0.0023   18.9   0.3     0.0072   17.3   0.3    1.8  1  CS          CS domain
     0.0081   16.5   0.0      0.011   16.2   0.0    1.3  1  PIH1_CS     PIH1 CS-like domain
  ------ inclusion threshold ------
       0.13   12.5   0.0       0.14   12.4   0.0    1.2  1  Cohesin     Cohesin domain
       0.15   12.1   0.2         25    5.1   0.0    2.2  2  FKBP26_C    FKBP26_C-terminal


Domain annotation for each model (and alignments):
>> HSP20  Hsp20/alpha crystallin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.1   0.8   2.7e-24     8e-21       1     101 [.      40     142 ..      40     143 .] 0.91

  Alignments for each domain:
  == domain 1  score: 74.1 bits;  conditional E-value: 2.7e-24
                 E--SSEEEEEEEEE-TT--CCCEEEEEETTEEEEEEE--......---TT----SS---EEEEEE--STTB-TTT-EEEEETTEEEEEEEBSS--..-- CS
       HSP20   1 dikeeeeefevkldvpglkkeelkvkvednrvlvkgehe....eeeedekglikerssrkFsrkftLPenvdadkvkaslkdGvLtvtvpkkepekkkk 95 
                 d++e ++  ev +++pg+kk++++v++++++++++ge      +e ++++  ++er+ ++Fsr++t+P+ vdad+++a+++ G+L++ +pk e+   ++
  EPX73394.1  40 DVHEGKDTVEVDVELPGVKKQDVQVHYDEGKLTISGESVnerkSESDKGNQRWSERRFGSFSRTITIPNRVDADRIEAQFNHGILSIVLPKIEES--RS 136
                 67899*******************************98866656666778899**************************************9999..67 PP

                 ------ CS
       HSP20  96 erkiqi 101
                  ++i+i
  EPX73394.1 137 RKQIAI 142
                 888877 PP

>> ArsA_HSP20  HSP20-like domain found in ArsA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.7   0.0   1.2e-15   3.6e-12       2      62 ..      46     127 ..      45     128 .. 0.97

  Alignments for each domain:
  == domain 1  score: 45.7 bits;  conditional E-value: 1.2e-15
  ArsA_HSP20   2 deyvlkldLPfvdkeeidlsrsgdeLtIkig......................nfrRqitLPsvlarkevtsAkfedgvLeIr 62 
                 d ++++++LP+v+k++++++ ++  LtI+ +                      +f+R+it P++++++++  A+f+ g L I 
  EPX73394.1  46 DTVEVDVELPGVKKQDVQVHYDEGKLTISGEsvnerksesdkgnqrwserrfgSFSRTITIPNRVDADRI-EAQFNHGILSIV 127
                 7899******************************************************************.**********97 PP

>> CS  CS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.3   2.4e-06    0.0072       6      76 .]      42     130 ..      37     130 .. 0.77

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 2.4e-06
                 EEETTEEEEEEE-TTCTTTTTCEEEEEETTEEEEEE...TS.CEEEEECE................BSS-BETTTEEEEEETTEEEEEEEB CS
          CS   6 yQtldeVvvtiyvkkvnikkkdvkvefkerslkvki...gk.eklliege................LfgpIdpeesswtieskkveitLkK 76 
                 ++ +d+V+v +++++v  kk+dv+v+  e +l+++    ++ +++ ++g+                  + +d +     +    + i+L K
  EPX73394.1  42 HEGKDTVEVDVELPGV--KKQDVQVHYDEGKLTISGesvNErKSESDKGNqrwserrfgsfsrtitIPNRVDADRIEAQFNHGILSIVLPK 130
                 67789**********9..*************999986665556666666588888888887777777777777777777777777777766 PP

>> PIH1_CS  PIH1 CS-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   3.6e-06     0.011      32      87 ..      47     121 ..      19     130 .. 0.87

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 3.6e-06
     PIH1_CS  32 elaieielPllksikevklrvgerrlel....................eskk.akyfLslkLpYpvdedkveAkFvk 87 
                 +  +++elP++   ++v+++++e +l +                    e ++  ++  ++++p +vd d++eA+F++
  EPX73394.1  47 TVEVDVELPGV-KKQDVQVHYDEGKLTIsgesvnerksesdkgnqrwsE-RRfGSFSRTITIPNRVDADRIEAQFNH 121
                 56799******.6799999999999999***************999744.336999999****************97 PP

>> Cohesin  Cohesin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   4.8e-05      0.14      14      57 ..      46      82 ..      39     131 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 4.8e-05
                SEEEEEEEEESECTTEEEEEEEEEE.TTTEEEEEEEE-TTS.SSG CS
     Cohesin 14 dtvtvpvtvsnvskkvaaaqftikYDpavlevvsvkaGsiv.kns 57
                dtv+v v++ +v+k    ++++++YD  +l+++    G+ v + +
  EPX73394.1 46 DTVEVDVELPGVKK----QDVQVHYDEGKLTIS----GESVnERK 82
                89************....***************....55443222 PP

>> FKBP26_C  FKBP26_C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0    0.0083        25      10      32 ..      51      73 ..      44      76 .. 0.86
   2 ?    5.0   0.0    0.0086        26      15      37 ..     109     131 ..     102     133 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0083
                HHH-TT--..--EEEEETTEEEE CS
    FKBP26_C 10 kryiPnidlekfkieiedktvtI 32
                 + +P ++++++++ ++++++tI
  EPX73394.1 51 DVELPGVKKQDVQVHYDEGKLTI 73
                4557*****************99 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.0086
                 T--..--EEEEETTEEEEE--TT CS
    FKBP26_C  15 nidlekfkieiedktvtIelpee 37 
                 ++d++ ++ +++ ++++I lp+ 
  EPX73394.1 109 RVDADRIEAQFNHGILSIVLPKI 131
                 69*******************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       388  (0.0216409); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1065.52
//
Query:       EPX73395.1  [L=221]
Description: hypothetical protein SOCG_16325 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-14   54.4  14.0    1.4e-14   54.1  14.0    1.0  1  Frag1     Frag1/DRAM/Sfk1 family
  ------ inclusion threshold ------
       0.32   10.8   7.4       0.67    9.7   0.1    3.3  3  DUF2759   Protein of unknown function (DUF2759)
        3.8    6.8  11.2       0.36   10.1   1.1    2.9  4  DUF3810   Protein of unknown function (DUF3810)


Domain annotation for each model (and alignments):
>> Frag1  Frag1/DRAM/Sfk1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.1  14.0   2.4e-18   1.4e-14      22     216 ..      10     201 ..       5     204 .. 0.87

  Alignments for each domain:
  == domain 1  score: 54.1 bits;  conditional E-value: 2.4e-18
       Frag1  22 vcavvqgpvdyvfmhkeqflPyISdigat.npeslffslalnlglflvilvallrfqr....lpplatksernlnfaalvlgligalglllvsifstae 115
                  ++ +q++ +     ++ +++++ d+ga  + + +f+ + +++g+f++++++++r       + p +++ e  + ++++++   +a +l+ +si +t +
  EPX73395.1  10 GLWNTQHKWHAP---DQPKPVFLTDMGAHaHTKGFFIPMTVITGVFYMLSLLAIRLCGqwgfIYPTSSELEAIFGWFSVLTSAGCAGCLIALSIRDTVH 105
                 566777744444...3455******888526789999************998776433334499999999999************************** PP

       Frag1 116 yhsvHlvgavvffvfgflyvllqtalyykmgrhy..vwnkstisfrlkvvllilavvlailfgvffvrhkkkcgygayslsAifEWllafwfiiffltf 212
                 +h++ + ++++++v+ f  +  + ++++    +y  ++n   +sf++k++++++a++++i+++ ++  h        +s sA fEW++ f++ i++++f
  EPX73395.1 106 HHRLNWQFTASYYVLAFAAADSNLVEWLFAYYRYhkQSNLVAVSFYFKALISLAATASVIAYAGMYHYH-------DHSRSARFEWVVEFLWAIYIFLF 197
                 ***********************999877666667799***************************9986.......359******************** PP

       Frag1 213 svDF 216
                 ++D+
  EPX73395.1 198 CLDL 201
                 ***8 PP

>> DUF2759  Protein of unknown function (DUF2759)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.8      0.05     3e+02      36      48 ..      40      52 ..      37      55 .. 0.88
   2 ?    9.7   0.1   0.00011      0.67      33      42 ..      78      87 ..      76      89 .. 0.92
   3 ?    1.7   0.0     0.037   2.2e+02      11      32 ..     134     155 ..     132     159 .. 0.82

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.05
     DUF2759 36 GWFsvmTiihsgy 48
                G+F  mT+i+  +
  EPX73395.1 40 GFFIPMTVITGVF 52
                9********9765 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00011
     DUF2759 33 avFGWFsvmT 42
                a+FGWFsv T
  EPX73395.1 78 AIFGWFSVLT 87
                79******98 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.037
     DUF2759  11 iGvlrslkkknllgvlFaglav 32 
                 ++ +r  k+ nl +v F + a+
  EPX73395.1 134 FAYYRYHKQSNLVAVSFYFKAL 155
                 7889999********9976655 PP

>> DUF3810  Protein of unknown function (DUF3810)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.1     0.022   1.3e+02     151     176 ..      22      47 ..      12      55 .. 0.88
   2 ?   -0.3   0.2      0.09   5.4e+02      56      83 ..      44      71 ..      27      77 .. 0.79
   3 ?    0.3   0.7     0.058   3.4e+02      27      86 ..      82     140 ..      67     148 .. 0.71
   4 ?   10.1   1.1     6e-05      0.36      27      89 ..     155     214 ..     139     218 .. 0.71

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.022
     DUF3810 151 pkpKpllfsellsylgitGyyfpftg 176
                  +pKp++++++  + ++ G+++p t+
  EPX73395.1  22 DQPKPVFLTDMGAHAHTKGFFIPMTV 47 
                 56*********************995 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.09
     DUF3810 56 llkvllrvllvllvvyflftllwglnYy 83
                 ++v++ v+++l+++ +  +  wg+ Y 
  EPX73395.1 44 PMTVITGVFYMLSLLAIRLCGQWGFIYP 71
                5678889999999999999999999996 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 0.058
     DUF3810  27 llivllillvilylvlaiklkkrkkkkkrllkvllrvllvllvvyflftllwglnYyrep 86 
                 ++ vl+ + ++ +l+    ++   ++++  +++  ++ +++ ++    ++ w + Yyr  
  EPX73395.1  82 WFSVLTSAGCAGCLIALS-IRDTVHHHRLNWQFTASYYVLAFAAADSNLVEWLFAYYRYH 140
                 555555555555555555.45556666677788888888888888999999999999976 PP

  == domain 4  score: 10.1 bits;  conditional E-value: 6e-05
     DUF3810  27 llivllillvilylvlaiklkkrkkkkkrllkvllrvllvllvvyflftllwglnYyreplse 89 
                 l+ +++ + vi+y  +   ++ + +++++ +++++++l+++ +++f+  ll +++Y r pl++
  EPX73395.1 155 LISLAATASVIAYAGM---YHYHDHSRSARFEWVVEFLWAIYIFLFCLDLLPAIHYERYPLND 214
                 2223333333333333...4467888899*******************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       636  (0.0354733); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.44
# Mc/sec: 1505.91
//
Query:       EPX73396.1  [L=261]
Description: versicolorin reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      1e-55  188.9   0.3    1.2e-55  188.6   0.3    1.0  1  adh_short_C2   Enoyl-(Acyl carrier protein) reductase
      1e-47  162.1   0.8    1.2e-47  161.9   0.8    1.1  1  adh_short      short chain dehydrogenase
    2.6e-14   53.5   0.2    4.3e-14   52.8   0.2    1.2  1  KR             KR domain
     0.0015   18.0   0.2     0.0041   16.6   0.2    1.7  1  Epimerase      NAD dependent epimerase/dehydratase family
     0.0044   16.5   0.0      0.044   13.2   0.1    2.0  2  GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
     0.0079   16.1   2.2      0.021   14.7   2.2    1.7  1  3HCDH_N        3-hydroxyacyl-CoA dehydrogenase, NAD binding d


Domain annotation for each model (and alignments):
>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.6   0.3   4.1e-59   1.2e-55       3     233 ..      19     258 ..      15     259 .. 0.92

  Alignments for each domain:
  == domain 1  score: 188.6 bits;  conditional E-value: 4.1e-59
                   TTSHHHHHHHHHHHTT-EEEEEESSGGHHHHHHHHHHHTT.....SEE..EE--TTSHHHHHHHHHHHHHHH.SSEEEEEE-----EGCSS-GGGH- CS
  adh_short_C2   3 asgIGraiAkalaeeGaevvltdlneeakkrveelaeelg.....aev..lecDVtdeeqvealveevvekf.gklDilvnnagiapklkgpflets 91 
                    +gIG++iA++la++Ga+v++t+ +e++k+++++l+++++     a++  +++D +d ++ e++ve++v+ f  +++ilvnnag ++   g + +++
    EPX73396.1  19 SRGIGAGIAETLASRGAKVAITYTSESSKESTQKLVNKIKgfgtsADAisIQADLRDVASAEHIVETTVKAFgPTIHILVNNAGCSKL--GTLGTLK 113
                   59***********************************9876765433369**********************779*************..******* PP

                   HHHHHHHHHHHTHHHHHHHHHHHHHCTSC......CEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCTGGGGS CS
  adh_short_C2  92 reefdraldvnlyslfllakaalplmkeg......gsivnlssvgaervvpnynaygaaKaalealtrylAvelgpkgiRvNavspgpikTlaasgi 182
                    e+++ ++dvn+++++ +++a++ ++ ++      g+i+n  s+g++++++++++y+a+Kaale++tr++A elgp+g +vN v pg+++T++ +++
    EPX73396.1 114 LEDYNYIFDVNVRAVLFMSEAVVGHLPKKekdgcgGRIINFGSIGGRIGLSGNSIYAASKAALEGFTRCWASELGPQGHTVNQVNPGAVDTDMLKQY 210
                   ***********************976655578899************************************************************** PP

                   TTHHHHHHHHHHHSTTSS.-B-HHHHHHHHHHHCSGGGTT--SEEEEESTTG CS
  adh_short_C2 183 kgfdelleelearaplgr.lgtpeevaeaalfLasdeasyitGqtlvvDgGl 233
                    g     e++ +++p+++ ++tp+++ae++ fLa d++++itGqt+ + gGl
    EPX73396.1 211 GGG----EAFTKMTPFENrVATPSDIAEIVSFLAEDRSRWITGQTISASGGL 258
                   965....55667777765277******************************7 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  161.9   0.8     4e-51   1.2e-47       1     190 [.      11     210 ..      11     215 .. 0.93

  Alignments for each domain:
  == domain 1  score: 161.9 bits;  conditional E-value: 4e-51
                 SEEEEESTTSHHHHHHHHHHHHTT-EEEE...EESCHHHHHHHHHHHHHT..TSEEEEEE-TTTSHHHHHHHHHHHHHHH.SSESEEEE---SS--SSG CS
   adh_short   1 kvvlvtGassGIGraiakelakeGakvvv...vdrseekleevakelkee..gakalaiqvDvtdreevealvekavkkl.gkldvLvnNAGitgsgpf 93 
                 kv++vtG+s+GIG  ia++la++Gakv++    ++s+e  +++++++k    +a+a+ iq+D++d +++e +ve+ vk +  ++++LvnNAG ++ g+ 
  EPX73396.1  11 KVAIVTGGSRGIGAGIAETLASRGAKVAItytSESSKESTQKLVNKIKGFgtSADAISIQADLRDVASAEHIVETTVKAFgPTIHILVNNAGCSKLGTL 109
                 89*************************9953234567788889999998888889*************************668**************** PP

                 GGCSHHHHHHHHHHHTHHHHHHHHHHHHHHH....HCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHHHH CS
   adh_short  94 selseeewervievNltgvflltravlpaml....kqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdmak 188
                   l+ e+++ +++vN+ +v+ +++av+ ++     ++ +GrI+n +S+ g+ ++ g + Y+AsKaa++g+tr++a el p+g +vn v+PG+vdTdm k
  EPX73396.1 110 GTLKLEDYNYIFDVNVRAVLFMSEAVVGHLPkkekDGCGGRIINFGSIGGRIGLSGNSIYAASKAALEGFTRCWASELGPQGHTVNQVNPGAVDTDMLK 208
                 *****************************9877667778**********************************************************98 PP

                 HH CS
   adh_short 189 el 190
                 + 
  EPX73396.1 209 QY 210
                 76 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.8   0.2   1.4e-17   4.3e-14       4     166 ..      14     186 ..      12     198 .. 0.86

  Alignments for each domain:
  == domain 1  score: 52.8 bits;  conditional E-value: 1.4e-17
                 EEETTTSHHHHHHHHHHHHHHS-.EEEEE-SS..--HHHHHHHHHHHHTT-EEEE..----TT-HHHHHHHHHHHHHHS.S---EEEE---------TT CS
          KR   4 litGGlGgLGlelarwlaekgar.hlvllsRsaaadedskaliaelealgaevev..vaaDvsdkdavealleeikaee.ppikGvihaAgvlrdklle 98 
                 ++tGG  g+G  +a++la++ga+  + ++s s  ++e+ ++l+++++  g++ ++  ++aD+ d ++ e+++e+  + + p+i+  ++ Ag ++ ++l 
  EPX73396.1  14 IVTGGSRGIGAGIAETLASRGAKvAITYTSES--SKESTQKLVNKIKGFGTSADAisIQADLRDVASAEHIVETTVKAFgPTIHILVNNAGCSKLGTLG 110
                 8********************77145566666..7888889*******998766511689**************999999******************* PP

                 T--HHHHHHHHTTTTHHHHHHHHHTTT....S--S....EEEEEEEHHHHH--TT-HHHHHHHHHHHHHHHHHHHH CS
          KR  99 emtaedleqvlapKvkGawnLhelled....esld....ffvlfSSiagllgsagqanYaaaNaflDalaeyrrsq 166
                 +++ ed++ ++   v+++  + e++      ++ d     ++ f Si+g +g  g + Yaa  a l+++ + ++s+
  EPX73396.1 111 TLKLEDYNYIFDVNVRAVLFMSEAVVGhlpkKEKDgcggRIINFGSIGGRIGLSGNSIYAASKAALEGFTRCWASE 186
                 **********************9986555555555333369****************************9988764 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.2   1.4e-06    0.0041       2     159 ..      14     186 ..      13     199 .. 0.70

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.4e-06
                 EEETTTSHHHHHHHHHHHHCTSE.EEEEES-STTTTCHHCHHC..........EEEE--TT-HHHHHHHHHHHT-SEEEE--S---HHHHHHSHHHHHH CS
   Epimerase   2 lVtGatGfiGsalvkallekgye.vigldrlssasntarledl..........elveldltdrsalerlfkeeqpdavihlAavggvaassedpadfie 89 
                 +VtG++  iG+ +++ l+++g +  i+ +++ss++ t++l ++            +++dl+d ++ e +++    ++v  ++   ++ +++   ++   
  EPX73396.1  14 IVTGGSRGIGAGIAETLASRGAKvAITYTSESSKESTQKLVNKikgfgtsadaISIQADLRDVASAEHIVE----TTVKAFGPTIHILVNNAGCSK--- 105
                 8********************99788888888888888888879**9999999889999999998888888....455555558888887777555... PP

                 HHTHHHHHHHHH..HHHHTCTEEEEEEEGGGGTSCSSSS....BSTCSTTS--......--SSHHHHHHHHHHHHHHHHHHH CS
   Epimerase  90 knlqgtlnllea..arkagvkrllflsSsevYGkdaeqp....keettltgpl......kpnspYaaaKlageklveayaaq 159
                   + gtl+l ++  +++ +v r + + S +v G  +++         ++ g++        ns Yaa+K+a e  ++ +a +
  EPX73396.1 106 LGTLGTLKLEDYnyIFDVNV-RAVLFMSEAVVGHLPKKEkdgcGGRIINFGSIggriglSGNSIYAASKAALEGFTRCWASE 186
                 55677777765411555666.6666667788886665211244333333333333336678888888888888777766655 PP

>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.1   1.5e-05     0.044       2      73 ..      15      85 ..      14     135 .. 0.85
   2 ?    1.2   0.0     0.063   1.9e+02     149     170 ..     165     186 ..     161     199 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.5e-05
                   EETTTSHHHHHHHHHHHHCT-CCEEEEEEESS.-TTHHHHHCTTT...TTGCCEEEEE--TT-HHHHHHHHHH CS
  GDP_Man_Dehyd  2 iTGiaGfiGsylaelLlekgyevhgivrrsss.fntgriehlakdpkeeleenlklhkgDltDssslerllae 73
                   +TG++  iG+ +ae L ++g +v ++   +ss  +t+++ +  k   + ++ +   +++Dl+D +s e++++ 
     EPX73396.1 15 VTGGSRGIGAGIAETLASRGAKVAITYTSESSkESTQKLVNKIK--GFGTSADAISIQADLRDVASAEHIVET 85
                   9****9*****************998775544056666665544..5667789999***********999986 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.063
                    --SHHHHHHHHHHHHHHHHHHH CS
  GDP_Man_Dehyd 149 PrsPYaaaKlyadwivvnyrea 170
                     +s Yaa+K++ + +++ +  +
     EPX73396.1 165 GNSIYAASKAALEGFTRCWASE 186
                    689*********9999987765 PP

>> 3HCDH_N  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   2.2     7e-06     0.021       1      85 [.      11      85 ..      11      91 .. 0.73

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 7e-06
                EEEEE--SC..CHHHHHHHHHHTT-EEEEE-S-HHHHHHHHHHHHHHHHCCTTTTSS-HHHHCCCHHCEEEES-HHHHHC-SEEEE- CS
     3HCDH_N  1 kvaviGaGt..mGagiaavfasagleVvlvdiseealekalekieksleklvekgklkeeeveaalarisfttdleeavdadlviEa 85
                kva++  G   +Gagia+ +as+g +V ++ +se++ e+ ++ ++k ++            + + ++ is+++dl+++++a+ ++E+
  EPX73396.1 11 KVAIVTGGSrgIGAGIAETLASRGAKVAITYTSESSKESTQKLVNK-IK-----------GFGTSADAISIQADLRDVASAEHIVET 85
                577776665449*******************999888777777665.22...........334455667777777777777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       512  (0.0285571); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1877.60
//
Query:       EPX73397.1  [L=52]
Description: hypothetical protein SOCG_02622 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       161  (0.00897987); expected 358.6 (0.02)
Passed bias filter:                      158  (0.00881254); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.33s 00:00:00.81 Elapsed: 00:00:00.53
# Mc/sec: 296.95
//
Query:       EPX73398.1  [L=296]
Description: iron/ascorbate oxidoreductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.7e-22   80.3   0.0    4.3e-22   79.1   0.0    1.6  2  DIOX_N        non-haem dioxygenase in morphine synthesis N-te
    2.5e-08   34.3   0.0    5.6e-08   33.2   0.0    1.5  1  2OG-FeII_Oxy  2OG-Fe(II) oxygenase superfamily


Domain annotation for each model (and alignments):
>> DIOX_N  non-haem dioxygenase in morphine synthesis N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.1   0.0   4.8e-26   4.3e-22       1     104 [.       6     109 ..       6     119 .. 0.89
   2 ?   -3.5   0.0       1.9   1.7e+04      27      35 ..     198     206 ..     198     211 .. 0.79

  Alignments for each domain:
  == domain 1  score: 79.1 bits;  conditional E-value: 4.8e-26
      DIOX_N   1 iPvidlsplsddedraavaeqlreAcrevGffyvvnhgvpeelidelfeaareFFalPeeeKeklaksp..sfrGysrlgeektdg...kkldwkesfd 94 
                 +P+idls    ++d + +  ++ + c+e+Gff+v+nhg++ e+++ +f+++ eFF+lP eeKek++ ++   + Gys+   ek+ +   + +  ke++d
  EPX73398.1   6 LPLIDLS----EQDTRFLSMEVVNSCKEWGFFLVKNHGIDMEQMEGVFKISDEFFSLPIEEKEKFKYKGgeLQAGYSKRMGEKLYSddsSTGATKEYYD 100
                 7******....8899999***********************************************55543589****99899988889999******** PP

      DIOX_N  95 lgtelpeddp 104
                 l++  p ++p
  EPX73398.1 101 LSRF-PHSNP 109
                 *998.54444 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 1.9
      DIOX_N  27 revGffyvv 35 
                 r++Gf++++
  EPX73398.1 198 RKHGFLQIK 206
                 689***998 PP

>> 2OG-FeII_Oxy  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.2   0.0   6.3e-12   5.6e-08      11      88 ..     171     253 ..     159     258 .. 0.80

  Alignments for each domain:
  == domain 1  score: 33.2 bits;  conditional E-value: 6.3e-12
                   -S------.---EEEEEESSSEEEEEEE-TT---EEEE......TEEEE----TTEEEEEE-HHHHHHTTS-S----EEE----G CS
  2OG-FeII_Oxy  11 pphpdpev.ilglgahtdaslltillqddvgglevfkd......gkwlrvppvdnslivniGdallflsngryksvlHrVlpvne 88 
                   p  +++ + + ++  h  ++ +t+l+q + g l++          +w+rv+  ++++ vni d+l f++ng++ks+ H ++  ++
    EPX73398.1 171 PDGIEHKKdDVDTNCHFNYGTITLLFQRKHGFLQIK-PpevdtiPDWVRVTINKDVISVNIADMLPFITNGKLKSSIHQIK-LDP 253
                   44444444467799***************9999**4.335656788********************************998.555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (296 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       363  (0.0202465); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.35s 00:00:00.95 Elapsed: 00:00:00.54
# Mc/sec: 1638.88
//
Query:       EPX73399.1  [L=262]
Description: short-chain type dehydrogenase/reductase, partial [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.3e-56  190.1   1.4    5.2e-56  189.8   1.4    1.0  1  adh_short_C2   Enoyl-(Acyl carrier protein) reductase
    5.6e-52  176.1   1.5    6.8e-52  175.8   1.5    1.1  1  adh_short      short chain dehydrogenase
    9.8e-18   64.7   0.6    1.5e-17   64.1   0.6    1.2  1  KR             KR domain
     0.0016   17.9   0.0      0.039   13.3   0.0    2.1  2  GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
     0.0028   17.1   1.4      0.031   13.7   0.1    2.5  3  Epimerase      NAD dependent epimerase/dehydratase family
     0.0066   16.4   1.6       0.02   14.8   1.6    1.8  1  3HCDH_N        3-hydroxyacyl-CoA dehydrogenase, NAD binding d
  ------ inclusion threshold ------
      0.019   14.3   0.0      0.031   13.6   0.0    1.3  1  DUF1776        Fungal family of unknown function (DUF1776)


Domain annotation for each model (and alignments):
>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  189.8   1.4     2e-59   5.2e-56       3     233 ..      19     259 ..      15     260 .. 0.92

  Alignments for each domain:
  == domain 1  score: 189.8 bits;  conditional E-value: 2e-59
                   TTSHHHHHHHHHHHTT-EEEEEESSGGHHHHHHHHHHHTT.....SEE..EE--TTSHHHHHHHHHHHHHHH.SSEEEEEE-----EGCSS-GGGH- CS
  adh_short_C2   3 asgIGraiAkalaeeGaevvltdlneeakkrveelaeelg.....aev..lecDVtdeeqvealveevvekf.gklDilvnnagiapklkgpflets 91 
                    +gIG++iA++la++Ga+v++t  +e++k+++++l+++++     a++  +++D +d ++ +++ve++v+ f  +++ilvnnag+ +   + + +++
    EPX73399.1  19 SRGIGAGIAETLASRGAKVAITFTSESSKESTQKLVNKIKrfgtsADAisIQADLRDLASAKHIVETTVKAFgPTIHILVNNAGFLEL--KTLGTIT 113
                   59*********************************999876655433369**********************779*************..9****** PP

                   HHHHHHHHHHHTHHHHHHHHHHHHHCTSC......CEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCTGGGGS CS
  adh_short_C2  92 reefdraldvnlyslfllakaalplmkeg......gsivnlssvgaervvpnynaygaaKaalealtrylAvelgpkgiRvNavspgpikTlaasgi 182
                   +e++++++dvn+++++ +a+a++ ++ ++      g+i+n+ s+ ++++  ++++y+a+Kaale++tr++A+elgp+g +vN v pg+++T++ ++ 
    EPX73399.1 114 KEDYHQVFDVNVRAVLFMAEAVVGYLPKKeesssgGRIINIGSIMGRMGYVGQSVYAASKAALEGFTRCWAAELGPHGHTVNQVNPGAVDTDMIKKS 210
                   ************************77666578899**********************************************************8887 PP

                   TTHHHHHHHHHHHSTTSS.-B-HHHHHHHHHHHCSGGGTT--SEEEEESTTG CS
  adh_short_C2 183 kgfdelleelearaplgr.lgtpeevaeaalfLasdeasyitGqtlvvDgGl 233
                   + fd  +e++++ +pl++ +++p+++a++++fLa + ++++tGqt+ + gGl
    EPX73399.1 211 E-FD--EEAVKKITPLENrFAQPQDIADIVAFLAEENSRWVTGQTISASGGL 259
                   6.44..467777889875488******************************7 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.8   1.5   2.7e-55   6.8e-52       1     191 [.      11     211 ..      11     215 .. 0.94

  Alignments for each domain:
  == domain 1  score: 175.8 bits;  conditional E-value: 2.7e-55
                 SEEEEESTTSHHHHHHHHHHHHTT-EEEE...EESCHHHHHHHHHHHHHT..TSEEEEEE-TTTSHHHHHHHHHHHHHHH.SSESEEEE---SS--SSG CS
   adh_short   1 kvvlvtGassGIGraiakelakeGakvvv...vdrseekleevakelkee..gakalaiqvDvtdreevealvekavkkl.gkldvLvnNAGitgsgpf 93 
                 kv++vtG+s+GIG  ia++la++Gakv++    ++s+e  +++++++k+   +a+a+ iq+D++d ++++ +ve+ vk +  ++++LvnNAG  + ++ 
  EPX73399.1  11 KVAIVTGGSRGIGAGIAETLASRGAKVAItftSESSKESTQKLVNKIKRFgtSADAISIQADLRDLASAKHIVETTVKAFgPTIHILVNNAGFLELKTL 109
                 89*************************99643456788899999***99988889*************************668**************** PP

                 GGCSHHHHHHHHHHHTHHHHHHHHHHHHHHH....HCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHHHH CS
   adh_short  94 selseeewervievNltgvflltravlpaml....kqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdmak 188
                   +++e++ +v++vN+ +v+ +++av+ ++     ++s+GrI+n++S+ g++++ g+++Y+AsKaa++g+tr++a el p+g +vn v+PG+vdTdm k
  EPX73399.1 110 GTITKEDYHQVFDVNVRAVLFMAEAVVGYLPkkeeSSSGGRIINIGSIMGRMGYVGQSVYAASKAALEGFTRCWAAELGPHGHTVNQVNPGAVDTDMIK 208
                 *****************************9888888899**********************************************************99 PP

                 HHC CS
   adh_short 189 elr 191
                 +++
  EPX73399.1 209 KSE 211
                 875 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.1   0.6     6e-21   1.5e-17       4     165 ..      14     185 ..      12     198 .. 0.87

  Alignments for each domain:
  == domain 1  score: 64.1 bits;  conditional E-value: 6e-21
                 EEETTTSHHHHHHHHHHHHHHS-E.EEEE-SS..--HHHHHHHHHHHHTT-EEEE..----TT-HHHHHHHHHHHHHHS.S---EEEE---------TT CS
          KR   4 litGGlGgLGlelarwlaekgarh.lvllsRsaaadedskaliaelealgaevev..vaaDvsdkdavealleeikaee.ppikGvihaAgvlrdklle 98 
                 ++tGG  g+G  +a++la++ga+  + ++s s  ++e+ ++l++++++ g++ ++  ++aD+ d ++ ++++e+  + + p+i+  ++ Ag+l+ k+l 
  EPX73399.1  14 IVTGGSRGIGAGIAETLASRGAKVaITFTSES--SKESTQKLVNKIKRFGTSADAisIQADLRDLASAKHIVETTVKAFgPTIHILVNNAGFLELKTLG 110
                 8********************77515555555..7888889********98766512689**************999999******************* PP

                 T--HHHHHHHHTTTTHHHHHHHHHTTT........S--SEEEEEEEHHHHH--TT-HHHHHHHHHHHHHHHHHHH CS
          KR  99 emtaedleqvlapKvkGawnLhelled........esldffvlfSSiagllgsagqanYaaaNaflDalaeyrrs 165
                 + t+ed++qv+   v+++  + e++          +s   ++ + Si g +g  gq+ Yaa  a l+++ + +++
  EPX73399.1 111 TITKEDYHQVFDVNVRAVLFMAEAVVGylpkkeesSSGGRIINIGSIMGRMGYVGQSVYAASKAALEGFTRCWAA 185
                 **********************998766666666677789*****************************998765 PP

>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.0   1.5e-05     0.039       2      73 ..      15      85 ..      14      93 .. 0.82
   2 ?    2.5   0.0     0.029        75     149     174 ..     165     190 ..     160     231 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.5e-05
                   EETTTSHHHHHHHHHHHHCT-CCEEEEEEE.SS-TTHHHHHCTTT...TTGCCEEEEE--TT-HHHHHHHHHH CS
  GDP_Man_Dehyd  2 iTGiaGfiGsylaelLlekgyevhgivrrs.ssfntgriehlakdpkeeleenlklhkgDltDssslerllae 73
                   +TG++  iG+ +ae L ++g +v ++   + s+ +t+++ +  k  ++ ++ +   +++Dl+D +s +++++ 
     EPX73399.1 15 VTGGSRGIGAGIAETLASRGAKVAITFTSEsSKESTQKLVNKIK--RFGTSADAISIQADLRDLASAKHIVET 85
                   9****9*****************998765505556777766554..5667789999**********9999976 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.029
                    --SHHHHHHHHHHHHHHHHHHHH--- CS
  GDP_Man_Dehyd 149 PrsPYaaaKlyadwivvnyreayglf 174
                     +s Yaa+K++ + +++ +  + g +
     EPX73399.1 165 GQSVYAASKAALEGFTRCWAAELGPH 190
                    689**********9999988776655 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.1   1.2e-05     0.031       2      61 ..      14      84 ..      13     101 .. 0.87
   2 ?   -1.3   0.0      0.48   1.2e+03     218     241 .]     131     155 ..     101     155 .. 0.64
   3 ?    0.7   0.0      0.11   2.9e+02     139     161 ..     166     188 ..     161     201 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.2e-05
                EEETTTSHHHHHHHHHHHHCTSE.EEEEES-STTTTCHHCHHC..........EEEE--TT-HHHHHHHHH CS
   Epimerase  2 lVtGatGfiGsalvkallekgye.vigldrlssasntarledl..........elveldltdrsalerlfk 61
                +VtG++  iG+ +++ l+++g +  i+++++ss++ t++l ++            +++dl+d ++ + +++
  EPX73399.1 14 IVTGGSRGIGAGIAETLASRGAKvAITFTSESSKESTQKLVNKikrfgtsadaISIQADLRDLASAKHIVE 84
                8********************99899999999999999988889999999999889999999887776665 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.48
                 HHHHHHHHHHHHTT-ST.TEEEEES CS
   Epimerase 218 vaeaillvlehvdagdk.geiyniG 241
                 +aea++  l + ++  + g+i+niG
  EPX73399.1 131 MAEAVVGYLPKKEESSSgGRIINIG 155
                 4445555554444433345577777 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.11
                 SSHHHHHHHHHHHHHHHHHHHHT CS
   Epimerase 139 nspYaaaKlageklveayaaqyg 161
                 +s Yaa+K+a e  ++ +aa+ g
  EPX73399.1 166 QSVYAASKAALEGFTRCWAAELG 188
                 689*********99999888766 PP

>> 3HCDH_N  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   1.6   7.8e-06      0.02       1      86 [.      11      86 ..      11      91 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 7.8e-06
                EEEEE--SC..CHHHHHHHHHHTT-EEEEE-S-HHHHHHHHHHHHHHHHCCTTTTSS-HHHHCCCHHCEEEES-HHHHHC-SEEEE-S CS
     3HCDH_N  1 kvaviGaGt..mGagiaavfasagleVvlvdiseealekalekieksleklvekgklkeeeveaalarisfttdleeavdadlviEav 86
                kva++  G   +Gagia+ +as+g +V ++ +se++ e+ ++ ++k +++           + + ++ is+++dl+++++a+ ++E+ 
  EPX73399.1 11 KVAIVTGGSrgIGAGIAETLASRGAKVAITFTSESSKESTQKLVNK-IKR-----------FGTSADAISIQADLRDLASAKHIVETT 86
                577776665449****************999988877776666664.333...........345567788888888888888888865 PP

>> DUF1776  Fungal family of unknown function (DUF1776)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.2e-05     0.031      20     203 ..      26     205 ..      10     225 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.2e-05
     DUF1776  20 ialDLerrGFiVfvtvesaeeeklvesedredIrplsvdddpssieasleefaqslesphvalpgakphvlrLkgvilvPslsy.ptgpietiplsswa 117
                 ia  L  rG  V +t +s++ ++  ++   ++I+   ++ d+ si+a l++ a+  +        +k +  +    ilv +  +     + ti+++ ++
  EPX73399.1  26 IAETLASRGAKVAITFTSESSKESTQKL-VNKIKRFGTSADAISIQADLRDLASAKHIV---ETTVKAFGPTI--HILVNNAGFlELKTLGTITKEDYH 118
                 7788888999999999999988888877.777999999999999999999987755433...33344444333..3888999998888899******** PP

     DUF1776 118 selnerllspiltlqallplltsra.kqkakiivvnpsissslnlpfhapEalvssalsalfevLkrelrphnidvtqikLGnldla 203
                 +++  ++ + + + +a +  l ++  + +   i+   si+  +  + +++ a    al+ +++  ++el+ph+  v q++ G +d  
  EPX73399.1 119 QVFDVNVRAVLFMAEAVVGYLPKKEeSSSGGRIINIGSIMGRMGYVGQSVYAASKAALEGFTRCWAAELGPHGHTVNQVNPGAVDTD 205
                 *********************9987434444566678*******************************************9998864 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (262 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       737  (0.0411066); expected 358.6 (0.02)
Passed bias filter:                      613  (0.0341904); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.64u 0.37s 00:00:01.01 Elapsed: 00:00:00.54
# Mc/sec: 1466.52
//
Query:       EPX73400.1  [L=346]
Description: 2-dehydropantoate 2-reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-29  102.8   0.0    2.5e-29  101.9   0.0    1.5  2  ApbA      Ketopantoate reductase PanE/ApbA
    1.4e-26   93.1   0.6    2.9e-26   92.1   0.6    1.5  1  ApbA_C    Ketopantoate reductase PanE/ApbA C terminal
  ------ inclusion threshold ------
       0.11   12.7   0.0       0.66   10.3   0.0    2.2  1  TrkA_N    TrkA-N domain


Domain annotation for each model (and alignments):
>> ApbA  Ketopantoate reductase PanE/ApbA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.9   0.0   4.2e-33   2.5e-29       1     151 [.       5     168 ..       5     169 .. 0.90
   2 ?   -3.3   0.0       1.1   6.3e+03     105     131 ..     261     287 ..     244     299 .. 0.69

  Alignments for each domain:
  == domain 1  score: 101.9 bits;  conditional E-value: 4.2e-33
                 EEEES-SHHHHHHHHHHHH.HTHC..EEEE-SCH.HHHHHHHHCEEEEETT....CEEEEEECEEECCHSCCCCS-ESEEEE-SSGGGHHHHHHHHGGG CS
        ApbA   1 iailGaGaiGsllaakLak.agad..vtlilrsr.rlealkknGlrltseg....geeilrppealsaeekselepidlvivtvKayqteealeeikpl 91 
                 i+ilG G+iG++la++L      +  v+l+lr++ rl ++++nG++lt e+    ++  +r +++++++++ +   id++ivt+K++ te a++++ p+
  EPX73400.1   5 IYILGVGSIGTFLACELMSlPYFKdkVVLLLRNKeRLGQFRENGSHLTLERvldnRQDLVRHKVKATCSSELNVDAIDNLIVTTKTTETETAMRDYLPF 103
                 89***************653333345***************************6555566666666666999*************************** PP

                 ECTCEEEEEESSSSCHHHHHTTTS.....TTSEEEEEEEE-EEEEEETTEEEECS--EEEEEESS CS
        ApbA  92 ldpntvvlllqNGlgheeelreal.....pkprvlggvtthgatregpgevhhagkgeikigela 151
                 l++++++l+++NG+g  e+l + +      +p++++gvt+h++  ++++ + h+  g++ki++++
  EPX73400.1 104 LNKHSNILFVHNGFGIIEALNKTVwdnpyTRPNLYQGVTSHSVSFKEKFWYCHKCFGALKIAKVP 168
                 ***************************9999***************************9998865 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.1
                 SCHHHHHTTTSTTSEEEEEEEE-EEEE CS
        ApbA 105 lgheeelrealpkprvlggvtthgatr 131
                 l + e+ + +l+ p+++  v ++g+++
  EPX73400.1 261 LANSEKAKNILSVPNLFDLVLYLGFVE 287
                 566677777777777777777777665 PP

>> ApbA_C  Ketopantoate reductase PanE/ApbA C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.1   0.6   4.9e-30   2.9e-26       3     124 ..     206     338 ..     204     339 .. 0.84

  Alignments for each domain:
  == domain 1  score: 92.1 bits;  conditional E-value: 4.9e-30
      ApbA_C   3 rlarweKllinaainpltalldckngellespelralvrallkEalavaeaegve.lseer..........leeaveavlektaanrsSMlqDveagrk 90 
                 +  +++K+++n+++n+++a+ldc n el +  e++ l+ a++ E+++v+ + +   ++ e+          ++  +   + ++a+n++SM+ D +++r+
  EPX73400.1 206 LIYQCQKFMVNCCMNSTSAILDCVNYELSNIAEVKLLFHAIITECVDVLFKSNNIlANSEKaknilsvpnlFDLVLYLGFVENARNSTSMRLDTLKKRE 304
                 56799********************************************777744233332344444444455555666666999************** PP

      ApbA_C  91 tEidyinGavvklAeklgvetPvnellyellkal 124
                 tEid +nG++vklA++ + e++vn++++ ++ka+
  EPX73400.1 305 TEIDSLNGWIVKLAKEFDCEATVNKTITLMVKAR 338
                 ******************************9985 PP

>> TrkA_N  TrkA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00011      0.66       1      43 [.       5      50 ..       5     115 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00011
                EEEES-SHHHHHHHHHHHH.TT..EEEEEEESSHHHHHHHHHTTSE CS
      TrkA_N  1 iiiiGlGrvGrslaeeLse.gg..kdvvvidkdeerveelreegle 43
                i i+G+G +G+ la eL++  +  ++vv+  +++er+ ++re+g +
  EPX73400.1  5 IYILGVGSIGTFLACELMSlPYfkDKVVLLLRNKERLGQFRENGSH 50
                579****************8889977****************9965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (346 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       559  (0.0311785); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.28s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 2343.22
//
Query:       EPX73401.1  [L=269]
Description: UbiE family methyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.7e-24   86.3   0.0    2.5e-24   85.8   0.0    1.3  1  Methyltransf_31  Methyltransferase domain
    1.2e-22   80.4   0.0    5.6e-22   78.3   0.0    2.0  2  Methyltransf_25  Methyltransferase domain
    1.7e-22   79.8   0.0    4.7e-22   78.4   0.0    1.7  2  Methyltransf_11  Methyltransferase domain
    1.7e-16   60.2   0.0    2.3e-16   59.9   0.0    1.2  1  Ubie_methyltran  ubiE/COQ5 methyltransferase family
    1.7e-14   54.3   0.0    3.1e-14   53.5   0.0    1.4  1  Methyltransf_12  Methyltransferase domain
    1.7e-13   50.7   0.0    2.7e-13   50.1   0.0    1.2  1  Methyltransf_23  Methyltransferase domain
    5.7e-09   36.0   0.0    8.3e-09   35.5   0.0    1.2  1  PCMT             Protein-L-isoaspartate(D-aspartate) O-methyl
    3.7e-07   29.8   0.0    3.5e-06   26.6   0.0    2.1  2  Methyltransf_4   Putative methyltransferase
    8.3e-07   28.2   0.0      1e-06   27.9   0.0    1.1  1  Methyltransf_9   Protein of unknown function (DUF1698)
    1.2e-06   28.3   0.0      2e-06   27.6   0.0    1.3  1  MetW             Methionine biosynthesis protein MetW
    8.9e-06   25.4   0.0    3.2e-05   23.5   0.0    1.8  2  MTS              Methyltransferase small domain
      2e-05   24.3   0.0    3.1e-05   23.6   0.0    1.2  1  Methyltransf_PK  AdoMet dependent proline di-methyltransferas
    0.00033   20.6   0.0     0.0077   16.1   0.0    2.3  2  Methyltransf_8   Hypothetical methyltransferase
    0.00077   18.1   0.0     0.0057   15.3   0.0    1.9  2  Methyltransf_29  Putative S-adenosyl-L-methionine-dependent m
     0.0066   15.8   0.0     0.0098   15.2   0.0    1.2  1  V_cholerae_RfbT  Vibrio cholerae RfbT protein
  ------ inclusion threshold ------
      0.011   14.9   0.0      0.021   13.9   0.0    1.5  1  RrnaAD           Ribosomal RNA adenine dimethylase
      0.033   13.8   0.0      0.047   13.3   0.0    1.2  1  NodS             Nodulation protein S (NodS)
      0.033   13.8   0.0      0.053   13.2   0.0    1.4  1  Methyltr_RsmB-F  16S rRNA methyltransferase RsmB/F
      0.049   12.7   0.0      0.089   11.9   0.0    1.3  1  DREV             DREV methyltransferase
      0.065   12.5   0.0      0.095   12.0   0.0    1.4  1  CMAS             Mycolic acid cyclopropane synthetase
       0.15   11.4   0.0       0.24   10.7   0.0    1.2  1  PrmA             Ribosomal protein L11 methyltransferase (Prm


Domain annotation for each model (and alignments):
>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.8   0.0   2.9e-27   2.5e-24       3     129 ..      38     163 ..      36     198 .. 0.88

  Alignments for each domain:
  == domain 1  score: 85.8 bits;  conditional E-value: 2.9e-27
  Methyltransf_31   3 kglrvlDlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaqklgldnveFeqgdieeleklledekfDlilsnevlnaladpdkilee 96 
                      ++ ++lD+GCG G++t  la +  p++ev+G++  +e + + ++++++l+l n++F+ ++  +l+  +ed++fD++++++vl ++a+  ++l+e
       EPX73401.1  38 RTDKILDVGCGPGTITTDLA-RYVPNGEVIGVEPIQEFVDQGNAKSSELNLRNCHFQFASGDNLP--FEDNTFDVVHAHQVLIHIANRVDVLKE 128
                      6679****************.889*****************************************..*************************** PP

  Methyltransf_31  97 iervlkpggilliedpr..llaelpakveeeskay 129
                      + rv kpgg +++ d++  +++ +pa+++e  +++
       EPX73401.1 129 MRRVAKPGGLICSKDADleTAQVYPANICEVLRFQ 163
                      *****************555555558888876654 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.3   0.0   6.6e-25   5.6e-22       1      97 []      42     137 ..      42     137 .. 0.95
   2 ?   -0.7   0.0       2.9   2.5e+03      68      90 ..     195     217 ..     167     219 .. 0.78

  Alignments for each domain:
  == domain 1  score: 78.3 bits;  conditional E-value: 6.6e-25
                      EEEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTT.TEEEEESBCCGBSSSTTTEEEEEEESTGGGSSHHHHHHHHHHHHHHE CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeegl.nvefvqgdaedlpfedgsfDlvvssgalhhlsdedlekalkeiarvL 93 
                      +Ld+GcG+G++t +la+ +++++v+gv++ +e++++ +++ +e +l n++f+ ++ ++lpfed++fD+v++ ++l h+   ++ ++lke++rv 
       EPX73401.1  42 ILDVGCGPGTITTDLARYVPNGEVIGVEPIQEFVDQGNAKSSELNLrNCHFQFASGDNLPFEDNTFDVVHAHQVLIHIA--NRVDVLKEMRRVA 133
                      8******************99*********************99999************************87788876..6789********* PP

                      EEEE CS
  Methyltransf_25  94 kpgG 97 
                      kpgG
       EPX73401.1 134 KPGG 137
                      ***9 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 2.9
                      EEEESTGGGSSHHHHHHHHHHHH CS
  Methyltransf_25  68 vvssgalhhlsdedlekalkeia 90 
                      ++ssg+l ++ +e+ +k+++e++
       EPX73401.1 195 ILSSGSLWFIANEEDRKLFAEMY 217
                      44557777888888899999998 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.4   0.0   5.5e-25   4.7e-22       1      94 [.      43     139 ..      43     141 .. 0.97
   2 ?   -2.4   0.0       9.4     8e+03      65      85 ..     195     217 ..     187     218 .. 0.75

  Alignments for each domain:
  == domain 1  score: 78.4 bits;  conditional E-value: 5.5e-25
                      EEET-TTSHHHHHHHHTT..SEEEEEES-HHHHHHHHHHCCHHT-.EEEETTEECCCTSS-TT-EEEEEEES-CCC-CCHHHHHHHHHHHEEEE CS
  Methyltransf_11   1 LdvGcGtGrlaealakrg..arvvgvDlskemlklakekaseegl.kvefvvadaeklpfednsfDlvvssevlhhvedpekalkeiaRvLkpg 91 
                      LdvGcG G ++ +la+++  ++v+gv++ +e++++ ++k+se +l ++ f+ a+  +lpfedn+fD+v +++vl h++++ ++lke++Rv kpg
       EPX73401.1  43 LDVGCGPGTITTDLARYVpnGEVIGVEPIQEFVDQGNAKSSELNLrNCHFQFASGDNLPFEDNTFDVVHAHQVLIHIANRVDVLKEMRRVAKPG 136
                      8**************999**********************99999*999********************************************* PP

                      EEE CS
  Methyltransf_11  92 Gll 94 
                      Gl+
       EPX73401.1 137 GLI 139
                      *98 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 9.4
                      EEEES-CCC-..CCHHHHHHHHH CS
  Methyltransf_11  65 vvssevlhhv..edpekalkeia 85 
                      ++ss +l ++  e+ +k+++e++
       EPX73401.1 195 ILSSGSLWFIanEEDRKLFAEMY 217
                      45666666666888999999987 PP

>> Ubie_methyltran  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.9   0.0   2.7e-19   2.3e-16      43     151 ..      34     141 ..      15     181 .. 0.85

  Alignments for each domain:
  == domain 1  score: 59.9 bits;  conditional E-value: 2.7e-19
                      --S--TTEEEEES-TT-HHHHHHHHHHHHHHEEEEEES-HHHHHHHHHHHHHHTSSTEEEEE--TTT-TTS-T-EEEEEEES-GGG-S-HHHHH CS
  Ubie_methyltran  43 vavkrgakvlDvagGtgDlafklsdsvgekgkvvvlDinenmLkvgekklkeegkinieflqanaeeLpfeddsfDvvtvsfGlrnvtDklkaL 136
                      +  kr  k+lDv +G g ++ +l++ v  +g+v++++  ++ +++g++k  e    n +f  a++ +Lpfed++fDvv     l  ++++  +L
       EPX73401.1  34 KHLKRTDKILDVGCGPGTITTDLARYV-PNGEVIGVEPIQEFVDQGNAKSSELNLRNCHFQFASGDNLPFEDNTFDVVHAHQVLIHIANRVDVL 126
                      3457888******************99.579******99******************************************************* PP

                      HHHHHHEEEEEEEEE CS
  Ubie_methyltran 137 keayrvlkpGGrlvv 151
                      ke++rv kpGG +  
       EPX73401.1 127 KEMRRVAKPGGLICS 141
                      ***********8754 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.5   0.0   3.6e-17   3.1e-14       1      99 []      43     139 ..      43     139 .. 0.89

  Alignments for each domain:
  == domain 1  score: 53.5 bits;  conditional E-value: 3.6e-17
  Methyltransf_12   1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvelealdlldldggssfDlvvasnvlhhlkdirevldnirklLk 94 
                      L++GcG G+++  l+++ p+ e++gv++ ++++++  +k ++ + +n+++     ++l  +d  ++fD+v+a++vl h++++ +vl+++r++ k
       EPX73401.1  43 LDVGCGPGTITTDLARYVPNGEVIGVEPIQEFVDQGNAKSSELNLRNCHFQFASGDNLPFED--NTFDVVHAHQVLIHIANRVDVLKEMRRVAK 134
                      8********************************88888888888877777777777766555..5***************************** PP

  Methyltransf_12  95 pgGrl 99 
                      pgG +
       EPX73401.1 135 PGGLI 139
                      ***75 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.1   0.0   3.1e-16   2.7e-13      14     161 ..      30     191 ..      16     194 .. 0.79

  Alignments for each domain:
  == domain 1  score: 50.1 bits;  conditional E-value: 3.1e-16
  Methyltransf_23  14 erllpklraggrvLdiGcGtG.illevlrengf.svtgvDlspeaveiae........kakkaqkdqfdeqeaaepqgkfdlIvlrevlehvpd 97 
                      + ll+ l++  ++Ld+GcG G i+++++r+ +  +v+gv++  e v+  +        + ++ +++ +  ++ ++++++fd++++ +vl h+ +
       EPX73401.1  30 AYLLKHLKRTDKILDVGCGPGtITTDLARYVPNgEVIGVEPIQEFVD--QgnaksselNLRNCHFQFASGDNLPFEDNTFDVVHAHQVLIHIAN 121
                      56777889999**********66666666665589999999654443..14477888877777777777778889999**************** PP

  Methyltransf_23  98 ppellrqiatllkpgGylllseplasl.....kedrllldwlylvpagrhi..sffsarslkelleeaGle 161
                         +l+ +++  kpgG++   + + +      ++   +l  ++l++  +h+  + +  r+l++++ e+G++
       EPX73401.1 122 RVDVLKEMRRVAKPGGLICSKDADLETaqvypANICEVLRFQFLAKS-EHSstHPQAGRHLRQWAIESGFS 191
                      ******************99998655566765566667777777766.88877888899999999999996 PP

>> PCMT  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.5   0.0   9.7e-12   8.3e-09      53     147 ..      13     111 ..       5     135 .. 0.81

  Alignments for each domain:
  == domain 1  score: 35.5 bits;  conditional E-value: 9.7e-12
                 TEEE--HHHHHH....HHHHTT.--TT-EEEEES-TTSHHHHHHHHHHCTTCEEEEEESBHHHHHHHHHHHHHCTTCSEEEEES-GGGTTGGG-SEEEE CS
        PCMT  53 natiSaphmval....alelle.lkkgarvLevGsGsGyltavlarlvgekgrvvsierikelveeakrnlkkldlenvivvvgDGrkGyeekaPYdai 146
                 ++ iS+ h   +    +  ll+ lk+ +++L+vG+G G  t  lar+v  +g v+++e i+e+v++ +++  +l+l+n +++++ G +   e   +d++
  EPX73401.1  13 DKNISNTHAWRTaensCAYLLKhLKRTDKILDVGCGPGTITTDLARYVP-NGEVIGVEPIQEFVDQGNAKSSELNLRNCHFQFASGDNLPFEDNTFDVV 110
                 55566655433211114445669************************95.788******************************9998765556667777 PP

                 E CS
        PCMT 147 h 147
                 h
  EPX73401.1 111 H 111
                 6 PP

>> Methyltransf_4  Putative methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.0   4.1e-09   3.5e-06       5      57 ..      42      94 ..      38     114 .. 0.89
   2 ?    0.6   0.0      0.39   3.3e+02      99     147 ..     125     173 ..     119     186 .. 0.64

  Alignments for each domain:
  == domain 1  score: 26.6 bits;  conditional E-value: 4.1e-09
                    EEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHHHHHCTTSSEEEEE CS
  Methyltransf_4  5 vleiGcGkGeflvalAkknPdknflGiEirvkvvakvlkkiealelkNlrilr 57
                    +l++GcG G+++ +lA   P+ +++G+E  ++ v++ ++k  +l+l+N +  +
      EPX73401.1 42 ILDVGCGPGTITTDLARYVPNGEVIGVEPIQEFVDQGNAKSSELNLRNCHFQF 94
                    79**********************************************98755 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.39
                     HHHHHHHHEEEEEEEEEEESHHHHHHHHHHHHHCSTTEEESSCCCSCCT CS
  Methyltransf_4  99 llkelarvLkkgGvlelaTDveeyaeemlkvleeeplferlskeeelee 147
                     +lke+ rv k+gG++  +  + e a+   + + e  +f++l k+e+ + 
      EPX73401.1 125 VLKEMRRVAKPGGLICSKDADLETAQVYPANICEVLRFQFLAKSEHSST 173
                     689999999****998875444444444444444445555555444433 PP

>> Methyltransf_9  Protein of unknown function (DUF1698)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   0.0   1.2e-09     1e-06     102     216 ..      27     140 ..      15     215 .. 0.76

  Alignments for each domain:
  == domain 1  score: 27.9 bits;  conditional E-value: 1.2e-09
                     HHHHHHGGGS.--TT-EEEEET-TTSHHHHHHHHCT-S.EEEEE---HHHHHHHHHHHCCTTTTSSEEEE---GGGS-T.---EEEEEEES-GGG CS
  Methyltransf_9 102 wkWdrvlphlsdlkgrtildvGcgnGyhlwrmvgegak.lvvGidPselfliqfeavrkllgedqrahllplgieqlpe.leafdtvfsmGvlyh 194
                          +l+hl   +  +ildvGcg G     ++   ++  v+G++P + f+ q +a    l+  +  +++    ++lp   ++fd+v +  vl h
      EPX73401.1  27 NSCAYLLKHL--KRTDKILDVGCGPGTITTDLARYVPNgEVIGVEPIQEFVDQGNAKSSELNLRNCHFQFAS-GDNLPFeDNTFDVVHAHQVLIH 118
                     4556678888..35678*********987766655443279***************9999988887777754.488997689************* PP

                     -S-HHHHHHHHHCTEEEEEEEE CS
  Methyltransf_9 195 rrsPldhllqlkdqlvkgGelv 216
                         +d l +++   + gG + 
      EPX73401.1 119 IANRVDVLKEMRRVAKPGGLIC 140
                     ************9988888654 PP

>> MetW  Methionine biosynthesis protein MetW
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   0.0   2.3e-09     2e-06       6     103 ..      31     134 ..      27     140 .. 0.79

  Alignments for each domain:
  == domain 1  score: 27.6 bits;  conditional E-value: 2.3e-09
        MetW   6 liaelikpgsrvldlGcGdGellellke.ekqvdgrGleldeegvaecvakGlsv.....iqgdldkdlenfedksfdyvvlsqtlqatrnpkevldel 98 
                 ++++ +k   ++ld+GcG G++ + l+    + +  G+e  +e v +  ak  ++     + + +  d   fed++fd+v   q l  + n   vl+e+
  EPX73401.1  31 YLLKHLKRTDKILDVGCGPGTITTDLARyVPNGEVIGVEPIQEFVDQGNAKSSELnlrncHFQFASGDNLPFEDNTFDVVHAHQVLIHIANRVDVLKEM 129
                 5678889999***********99877541445677899999999999998875441111133445667778**************************** PP

        MetW  99 lrigr 103
                  r+++
  EPX73401.1 130 RRVAK 134
                 ***97 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.0   3.8e-08   3.2e-05      12      78 ..      21      85 ..      14     113 .. 0.71
   2 ?   -1.2   0.0       1.5   1.3e+03     131     142 ..     197     208 ..     191     228 .. 0.79

  Alignments for each domain:
  == domain 1  score: 23.5 bits;  conditional E-value: 3.8e-08
                TTTS--HHHHHHHHHCHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHT CS
         MTS 12 skdklDkGsklLletlpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenlean 78
                +++   +  + Ll++l+   ++k+lD+GcG G +++ la+  p+ ev  v+   + ++  ++  ++ 
  EPX73401.1 21 AWRTAENSCAYLLKHLKR--TDKILDVGCGPGTITTDLARYVPNGEVIGVEPIQEFVDQGNAKSSEL 85
                55666677889*****99..667*********************99998887666665544444443 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 1.5
                 EEEEEEEEEETT CS
         MTS 131 egGeLliVanrk 142
                 ++G+L+++an++
  EPX73401.1 197 SSGSLWFIANEE 208
                 679*****9975 PP

>> Methyltransf_PK  AdoMet dependent proline di-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   0.0   3.7e-08   3.1e-05      52     162 ..      35     144 ..      17     154 .. 0.87

  Alignments for each domain:
  == domain 1  score: 23.6 bits;  conditional E-value: 3.7e-08
  Methyltransf_PK  52 gkrevkvaldcGaGiGrvtknlLlkll.skvDlvepvekflekakeelaeekkkvgkvyvvglqeftPeegrYdliWiqWcvghLtDedlvafl 144
                      + ++++ +ld+G+G G +t +l   +  ++v  vep+++f+++ + + +e + + +++   + ++   e++ +d++    ++ h+++   v+ l
       EPX73401.1  35 HLKRTDKILDVGCGPGTITTDLARYVPnGEVIGVEPIQEFVDQGNAKSSELNLRNCHFQFASGDNLPFEDNTFDVVHAHQVLIHIANR--VDVL 126
                      5688999************99865543468999************999998889999888888999999***************9865..999* PP

  Methyltransf_PK 145 krckkalkpnGlivvken 162
                      k   +  kp+Gli+ k+ 
       EPX73401.1 127 KEMRRVAKPGGLICSKDA 144
                      **************9986 PP

>> Methyltransf_8  Hypothetical methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0     9e-06    0.0077      65     154 ..      34     139 ..       3     151 .. 0.56
   2 ?   -3.4   0.0       8.2     7e+03     147     162 ..     195     210 ..     192     220 .. 0.69

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 9e-06
                     HHHCTS-TTS-EEEES-TT-HHH..................HH--S-..EEEEESS-SSTTEEES-TTS-S--TT-EEEEEEES---.SS-HHHH CS
  Methyltransf_8  65 rklkkkkdnlvvadlGcGeakia..................eavrekekvrsfdlvavnervvacdlakvPledesvdvavfclslm.gtnladf 140
                     ++lk       + d+GcG   i+                  ++  ++ + +s +l   n + +     ++P ed++ dv+     l+   n  d 
      EPX73401.1  34 KHLK---RTDKILDVGCGPGTITtdlaryvpngevigvepiQEFVDQGNAKSSELNLRNCHFQFASGDNLPFEDNTFDVVHAHQVLIhIANRVDV 125
                     4443...34457777777766653322222221111110000111112233333333444444444469**********97766655268999** PP

                     HHHHHHHEEEEEEE CS
  Methyltransf_8 141 lkeanrvlkvGGll 154
                     lke++rv k+GGl+
      EPX73401.1 126 LKEMRRVAKPGGLI 139
                     ************97 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 8.2
                     HEEEEEEEEEEEEGGG CS
  Methyltransf_8 147 vlkvGGllkvaevksr 162
                     +l  G l+++a+ + r
      EPX73401.1 195 ILSSGSLWFIANEEDR 210
                     7888888888876555 PP

>> Methyltransf_29  Putative S-adenosyl-L-methionine-dependent methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.19   1.6e+02     115     133 ..      36      54 ..      11      69 .. 0.82
   2 !   15.3   0.0   6.7e-06    0.0057     426     486 ..     105     164 ..      93     178 .. 0.76

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.19
  Methyltransf_29 115 ggkvrtvlDvGCgvasfga 133
                       +++ ++lDvGCg    ++
       EPX73401.1  36 LKRTDKILDVGCGPGTITT 54 
                      577889******9776655 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 6.7e-06
  Methyltransf_29 426 RtyDllhadslfsklkkrCeledillemdRilRPeGaviirdkvevlekv..kkllkalkWev 486
                       t+D++ha++++ ++ +r   +d+l em R+ +P+G +  +d      +v   ++ + l+++ 
       EPX73401.1 105 NTFDVVHAHQVLIHIANR---VDVLKEMRRVAKPGGLICSKDADLETAQVypANICEVLRFQF 164
                      599999999999999877...68999999**9**99999999876655553335566666555 PP

>> V_cholerae_RfbT  Vibrio cholerae RfbT protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   1.1e-05    0.0098      72     150 ..      31     109 ..      24     130 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.1e-05
  V_cholerae_RfbT  72 wivnhckhdttyidiganvgtfcgiaarhitqgkiiaiepltemensirmnvqlnnplvefhhfgcaigene..genifev 150
                      ++++h k+    +d+g+  gt+    ar++ +g++i +ep+ e+ +    n +  +  +   hf  a g+n    +n f+v
       EPX73401.1  31 YLLKHLKRTDKILDVGCGPGTITTDLARYVPNGEVIGVEPIQEFVDQG--NAKSSELNLRNCHFQFASGDNLpfEDNTFDV 109
                      678999**99*******************************9986543..4444444455567777777774224566665 PP

>> RrnaAD  Ribosomal RNA adenine dimethylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   2.5e-05     0.021      28      73 ..      36      83 ..      28     121 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 2.5e-05
                GGTTSEEEEES-TTTCCHHHHHCC-..SEEEEE-S-HHHHHHHHCHTT CS
      RrnaAD 28 leekltvleigpGkGilTeeLakra..kqvvvlElderLakllqkkls 73
                l+ ++++l++g G+G  T+ La ++   +v  +E  ++++   ++k s
  EPX73401.1 36 LKRTDKILDVGCGPGTITTDLARYVpnGEVIGVEPIQEFVDQGNAKSS 83
                6789*********************87788888888888887777555 PP

>> NodS  Nodulation protein S (NodS)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   5.5e-05     0.047      43     127 ..      38     127 ..      19     141 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 5.5e-05
        NodS  43 siadalevGcaaGalterlapyckrltvvdv......veeaiararervkesshiswivsdvqqfstdekfdlivvaevlyyiedvaelra 127
                 +  ++l+vGc  G++t  la y  +  v+ v      v++  a++ e   +  h ++   d   f+ d+ fd++   +vl +i + +++  
  EPX73401.1  38 RTDKILDVGCGPGTITTDLARYVPNGEVIGVepiqefVDQGNAKSSELNLRNCHFQFASGDNLPFE-DNTFDVVHAHQVLIHIANRVDVLK 127
                 55679*****************99998886533222255555565554445589999999988886.668****99****99998877654 PP

>> Methyltr_RsmB-F  16S rRNA methyltransferase RsmB/F
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   6.2e-05     0.053       6      61 ..      36      90 ..      30     116 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 6.2e-05
                     --TT-EEEESS-TTSHHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SE CS
  Methyltr_RsmB-F  6 pqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtnt 61
                     ++  ++ilD+ ++PG  Tt +a    ++g+v+ v+  +e +++ ++  + L+++n 
       EPX73401.1 36 LKRTDKILDVGCGPGTITTDLARY-VPNGEVIGVEPIQEFVDQGNAKSSELNLRNC 90
                     577899*****************9.6789999999988888888877777777754 PP

>> DREV  DREV methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0    0.0001     0.089      94     182 ..      38     137 ..      30     141 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.0001
        DREV  94 edkklldlGaGdGeitkrvaptfee............vyatelsetmrdrlkkkkynvlsalelqetdvkldlilclnlldrcfdplklledirsalep 180
                 ++ k+ld+G G G it  +a ++ +            v     ++    +l+  +++  s  +l   d  +d++ +  +l    + + +l+++r + +p
  EPX73401.1  38 RTDKILDVGCGPGTITTDLARYVPNgevigvepiqefV-DQGNAKSSELNLRNCHFQFASGDNLPFEDNTFDVVHAHQVLIHIANRVDVLKEMRRVAKP 135
                 6789*******************988877777766422.222333344567888889888888888899*************************99988 PP

        DREV 181 ng 182
                  g
  EPX73401.1 136 GG 137
                 66 PP

>> CMAS  Mycolic acid cyclopropane synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00011     0.095      58      93 ..      34      70 ..       5     152 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00011
                TT--TT-EEEEES-TTSHHHHHHHHHH.--EEEEEES CS
        CMAS 58 lelkpGmtlLdiGcGWGslvrravery.dvkvvglTl 93
                 +lk  +++Ld+GcG G++++  ++   + +v+g+  
  EPX73401.1 34 KHLKRTDKILDVGCGPGTITTDLARYVpNGEVIGVEP 70
                58999************99887665433567777755 PP

>> PrmA  Ribosomal protein L11 methyltransferase (PrmA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00029      0.24     147     255 ..      24     138 ..      19     145 .. 0.61

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00029
        PrmA 147 TTklclealeklvkegeevlDvGtGSGiLaia.aakLgakkvvavDiDevAvkv.akeNaelNkveaklevalseell.keekadvivaN.ILaevl.. 239
                 T + +   l k++k+++++lDvG+G G ++   a  +   +v++v   +  v+   ++  elN  + +++ a  ++l+ +++++dv+ a  +L ++   
  EPX73401.1  24 TAENSCAYLLKHLKRTDKILDVGCGPGTITTDlARYVPNGEVIGVEPIQEFVDQgNAKSSELNLRNCHFQFASGDNLPfEDNTFDVVHAHqVLIHIAnr 122
                 5566667777889999***********887752556777889998744444443034445555555566654444554557888998885244444311 PP

        PrmA 240 ielaedikklvkeggl 255
                 ++ ++++ ++ k+ggl
  EPX73401.1 123 VDVLKEMRRVAKPGGL 138
                 2344555566666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (269 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       427  (0.0238162); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                        21  (0.00117129); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              21  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 1866.01
//
Query:       EPX73402.1  [L=255]
Description: versicolorin reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.5e-57  193.3   0.1    5.3e-57  193.1   0.1    1.0  1  adh_short_C2     Enoyl-(Acyl carrier protein) reductase
    6.4e-53  179.1   0.1    7.5e-53  178.9   0.1    1.1  1  adh_short        short chain dehydrogenase
    5.2e-12   46.0   0.0    7.3e-12   45.6   0.0    1.2  1  KR               KR domain
     0.0016   17.9   0.1     0.0025   17.3   0.1    1.4  1  Epimerase        NAD dependent epimerase/dehydratase family
  ------ inclusion threshold ------
      0.015   14.7   0.1      0.022   14.2   0.1    1.2  1  GDP_Man_Dehyd    GDP-mannose 4,6 dehydratase
      0.023   14.0   0.3      0.038   13.3   0.3    1.3  1  2-Hacid_dh_C     D-isomer specific 2-hydroxyacid dehydrogenas
      0.029   14.3   2.1      0.075   12.9   2.1    1.6  1  3HCDH_N          3-hydroxyacyl-CoA dehydrogenase, NAD binding
      0.076   13.0   0.0         12    5.9   0.0    2.3  2  Glyco_trans_4_2  Glycosyl transferase 4-like


Domain annotation for each model (and alignments):
>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  193.1   0.1   2.4e-60   5.3e-57       3     233 ..      14     252 ..      10     253 .. 0.93

  Alignments for each domain:
  == domain 1  score: 193.1 bits;  conditional E-value: 2.4e-60
                   TTSHHHHHHHHHHHTT-EEEEEESSGGHHHHHHHHHHHTT.....SEE..EE--TTSHHHHHHHHHHHHHHH.SSEEEEEE-----EGCSS-GGGH- CS
  adh_short_C2   3 asgIGraiAkalaeeGaevvltdlneeakkrveelaeelg.....aev..lecDVtdeeqvealveevvekf.gklDilvnnagiapklkgpflets 91 
                    +gIG+aiA++la++Ga+v++t+ +e++k+++++l+++++     a++  +++D +d ++ +++ve++v+ f  +++il+nnag+ ++  +p+ +t+
    EPX73402.1  14 SKGIGAAIAETLANRGAKVAITYTSESSKESTQKLVNKIKgfgtsADAisIQADLRDIASAKHIVETTVKAFgPTIHILINNAGYLDE-PKPIGTTT 109
                   58***********************************9876765433369**********************779************9.******** PP

                   HHHHHHHHHHHTHHHHHHHHHHHHHCTSC..CEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCTGGGGSTTHH CS
  adh_short_C2  92 reefdraldvnlyslfllakaalplmkeg..gsivnlssvgaervvpnynaygaaKaalealtrylAvelgpkgiRvNavspgpikTlaasgikgfd 186
                    ++f+ ++d n++++f +++ ++p++ +   g+i+n+ s+++++++++y  y+ +Kaa+e++tr++A elgp+g +vN v pgp+ T++ ++++  +
    EPX73402.1 110 LDQFNAIFDLNVRAVFFMTESVAPHLPKDkgGRIINIGSIAGRKAFAQYPLYCGSKAAIEGFTRCWASELGPQGHTVNQVNPGPVTTDMLKSLD--S 204
                   ************************7765557**************************************************************8..6 PP

                   HHHHHHHHHST.TSS-B-HHHHHHHHHHHCSGGGTT--SEEEEESTTG CS
  adh_short_C2 187 elleelearap.lgrlgtpeevaeaalfLasdeasyitGqtlvvDgGl 233
                   el +  ++ +p  +r++ p+++a ++ fL+ +  +++tGq++ + gG+
    EPX73402.1 205 ELVKVQAQATPyEQRNAIPDDIAGIVGFLVEENGRWVTGQVISASGGY 252
                   777777777772567********************************9 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.9   0.1   3.3e-56   7.5e-53       1     192 [.       6     204 ..       6     207 .. 0.94

  Alignments for each domain:
  == domain 1  score: 178.9 bits;  conditional E-value: 3.3e-56
                 SEEEEESTTSHHHHHHHHHHHHTT-EEEE...EESCHHHHHHHHHHHHHT..TSEEEEEE-TTTSHHHHHHHHHHHHHHH.SSESEEEE---S.S--SS CS
   adh_short   1 kvvlvtGassGIGraiakelakeGakvvv...vdrseekleevakelkee..gakalaiqvDvtdreevealvekavkkl.gkldvLvnNAGi.tgsgp 92 
                 kv++vtG+s+GIG aia++la++Gakv++    ++s+e  +++++++k    +a+a+ iq+D++d ++++ +ve+ vk +  ++++L+nNAG   +++p
  EPX73402.1   6 KVAIVTGGSKGIGAAIAETLANRGAKVAItytSESSKESTQKLVNKIKGFgtSADAISIQADLRDIASAKHIVETTVKAFgPTIHILINNAGYlDEPKP 104
                 89*************************9953234567788889999998888889*************************668**********999*** PP

                 GGGCSHHHHHHHHHHHTHHHHHHHHHHHHHHHHCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHHHHHHC CS
   adh_short  93 fselseeewervievNltgvflltravlpamlkqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdmakelr 191
                 +  ++ +++++++++N+ +vf +t++v+p++ k ++GrI+n++S+ag++++a+++ Y+ sKaa++g+tr++a el p+g +vn v+PG+v Tdm k+l 
  EPX73402.1 105 IGTTTLDQFNAIFDLNVRAVFFMTESVAPHLPKDKGGRIINIGSIAGRKAFAQYPLYCGSKAAIEGFTRCWASELGPQGHTVNQVNPGPVTTDMLKSLD 203
                 ***********************************************************************************************9987 PP

                 T CS
   adh_short 192 e 192
                 +
  EPX73402.1 204 S 204
                 6 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.6   0.0   3.2e-15   7.3e-12       4     160 ..       9     172 ..       7     190 .. 0.78

  Alignments for each domain:
  == domain 1  score: 45.6 bits;  conditional E-value: 3.2e-15
                 EEETTTSHHHHHHHHHHHHHHS-.EEEEE-SS..--HHHHHHHHHHHHTT-EEEE..----TT-HHHHHHHHHHHHHHS.S---EEEE------.---T CS
          KR   4 litGGlGgLGlelarwlaekgar.hlvllsRsaaadedskaliaelealgaevev..vaaDvsdkdavealleeikaee.ppikGvihaAgvlr.dkll 97 
                 ++tGG  g+G ++a++la++ga+  + ++s s  ++e+ ++l+++++  g++ ++  ++aD+ d ++ ++++e+  + + p+i+  i+ Ag l+  k++
  EPX73402.1   9 IVTGGSKGIGAAIAETLANRGAKvAITYTSES--SKESTQKLVNKIKGFGTSADAisIQADLRDIASAKHIVETTVKAFgPTIHILINNAGYLDePKPI 105
                 8********************77145566666..7888889*******998666512689**************999999*************85699* PP

                 TT--HHHHHHHHTTTTHHHHHHHHHTTT....S--SEEEEEEEHHHHH--TT-HHHHHHHHHHHHHH CS
          KR  98 eemtaedleqvlapKvkGawnLhelled....esldffvlfSSiagllgsagqanYaaaNaflDala 160
                  ++t +++++++   v+++  + e +++    ++   ++ + Siag    a+   Y    a ++++ 
  EPX73402.1 106 GTTTLDQFNAIFDLNVRAVFFMTESVAPhlpkDKGGRIINIGSIAGRKAFAQYPLYCGSKAAIEGFT 172
                 ************9999998888876655433355556666666666555555555555555555555 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.1   1.1e-06    0.0025       2     123 ..       9     136 ..       8     187 .. 0.74

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 1.1e-06
                 EEETTTSHHHHHHHHHHHHCTSE.EEEEES-STTTTCHHCHHC..........EEEE--TT-HHHHHHHHHHHT-SEEEE--S---HHHHHHSHHHHHH CS
   Epimerase   2 lVtGatGfiGsalvkallekgye.vigldrlssasntarledl..........elveldltdrsalerlfkeeqpdavihlAavggvaassedpadfie 89 
                 +VtG++  iG+a+++ l+++g +  i+ +++ss++ t++l ++            +++dl+d ++ + ++++    +v  ++   ++  ++    d  +
  EPX73402.1   9 IVTGGSKGIGAAIAETLANRGAKvAITYTSESSKESTQKLVNKikgfgtsadaISIQADLRDIASAKHIVET----TVKAFGPTIHILINNAGYLDEPK 103
                 8********************99788888888888888888779***9999999999999999988888773....44444335555555555555555 PP

                 HHTHHHHHHHHHHHHHTCTEEEEEEEGGGGTSCS CS
   Epimerase  90 knlqgtlnlleaarkagvkrllflsSsevYGkda 123
                      tl+ ++a+++ +v r +f+ + +v +  +
  EPX73402.1 104 PIGTTTLDQFNAIFDLNV-RAVFFMTESVAPHLP 136
                 555556666777777777.777777777776554 PP

>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.1   9.8e-06     0.022       2      73 ..      10      80 ..       9      85 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 9.8e-06
                   EETTTSHHHHHHHHHHHHCT-CCEEEEEEESS.-TTHHHHHCTTT...TTGCCEEEEE--TT-HHHHHHHHHH CS
  GDP_Man_Dehyd  2 iTGiaGfiGsylaelLlekgyevhgivrrsss.fntgriehlakdpkeeleenlklhkgDltDssslerllae 73
                   +TG++  iG+ +ae L ++g +v ++   +ss  +t+++ +  k   + ++ +   +++Dl+D +s +++++ 
     EPX73402.1 10 VTGGSKGIGAAIAETLANRGAKVAITYTSESSkESTQKLVNKIK--GFGTSADAISIQADLRDIASAKHIVET 80
                   9****99****************998775544056666665544..5667789999*********99999976 PP

>> 2-Hacid_dh_C  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.3   1.7e-05     0.038      38     125 ..       6      94 ..       2      97 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.7e-05
                   EEEEES-SH..HHHHHHHHHHHTT-EEEEESSSHHHHHCHHHHTCEECSHHHHHHH-SEEEE-S--ST.TTTTSBSHHHHHCSTTTE.EEEE CS
  2-Hacid_dh_C  38 tvGiiGlGr..IGqavakrlkafgmkviaydrskkkeeeeeelgvelvsleellaesDivslhlpltp.etrhlinaeelakmkkga.iliN 125
                   +v+i+  G+  IG a+a++l+  g+kv ++ +s++++e++   +  + +++ +  ++D +s+ + l + +  + i +++ +++ ++  iliN
    EPX73402.1   6 KVAIVTGGSkgIGAAIAETLANRGAKVAITYTSESSKEST---QKLVNKIKGFGTSADAISIQADLRDiASAKHIVETTVKAFGPTIhILIN 94 
                   45555444334****************9998887755523...3346799**************9987434445555666666666436666 PP

>> 3HCDH_N  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   2.1   3.3e-05     0.075       1      85 [.       6      80 ..       6      86 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 3.3e-05
                EEEEE--SC..CHHHHHHHHHHTT-EEEEE-S-HHHHHHHHHHHHHHHHCCTTTTSS-HHHHCCCHHCEEEES-HHHHHC-SEEEE- CS
     3HCDH_N  1 kvaviGaGt..mGagiaavfasagleVvlvdiseealekalekieksleklvekgklkeeeveaalarisfttdleeavdadlviEa 85
                kva++  G   +Ga ia+ +a++g +V ++ +se++ e+ ++ ++k ++            + + ++ is+++dl+++++a+ ++E+
  EPX73402.1  6 KVAIVTGGSkgIGAAIAETLANRGAKVAITYTSESSKESTQKLVNK-IK-----------GFGTSADAISIQADLRDIASAKHIVET 80
                5777766654499******************999888777777665.22...........234455667777777777777777776 PP

>> Glyco_trans_4_2  Glycosyl transferase 4-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.0    0.0053        12       1      46 [.       6      51 ..       6     101 .. 0.75
   2 ?    5.1   0.0    0.0098        22      10      49 ..     169     208 ..     162     222 .. 0.80

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0053
  Glyco_trans_4_2  1 killlanlssvhtlrlakeLakrgyeVhvitpkkgakdeleaegih 46
                     k+++++  s++    +a+ La+rg +V++    +++k+ ++    +
       EPX73402.1  6 KVAIVTGGSKGIGAAIAETLANRGAKVAITYTSESSKESTQKLVNK 51
                     67888888888888999**************999988887765444 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.0098
  Glyco_trans_4_2  10 svhtlrlakeLakrgyeVhvitpkkgakdeleaegihvhr 49 
                      +++t+ +a+eL  +g++V  + p++ + d l++ + ++ +
       EPX73402.1 169 EGFTRCWASELGPQGHTVNQVNPGPVTTDMLKSLDSELVK 208
                      789****************999988877766666665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       678  (0.0378158); expected 358.6 (0.02)
Passed bias filter:                      591  (0.0329634); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.47u 0.29s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 1752.78
//
Query:       EPX73403.1  [L=294]
Description: hypothetical protein SOCG_02628 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.41   10.7   3.6       0.67   10.0   3.6    1.3  1  CDK2AP    Cyclin-dependent kinase 2-associated protein
        3.1    7.5  11.8        6.2    6.6   0.2    2.5  2  DUF508    Domain of unknown function (DUF508)


Domain annotation for each model (and alignments):
>> CDK2AP  Cyclin-dependent kinase 2-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   3.6   7.5e-05      0.67      37      84 ..     223     271 ..     208     284 .. 0.65

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 7.5e-05
      CDK2AP  37 fynyqq.qreqkeqqprveItaisssrgssagsgassgsnsasdyatss 84 
                 +  y+  + ++ +++  v+It+i +s++ s++ +assgs+s+s++++ss
  EPX73403.1 223 DSSYISpKLKTISKSKSVNITKIDVSASPSSSKSASSGSSSSSSSSASS 271
                 44444414455678889*********99886666666666666655555 PP

>> DUF508  Domain of unknown function (DUF508)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.2   0.00069       6.2       9      59 ..     111     163 ..      99     185 .. 0.60
   2 ?    3.5   6.7    0.0059        53       5      36 ..     244     275 ..     215     286 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.00069
      DUF508   9 ssstssssssavsssktsdssyvslP..tyssanlkstrsgkyvtmvhvkfvl 59 
                 s + ss   +a+s + t+   y+  P  t++++++ + +s    t+v+  f++
  EPX73403.1 111 SINDSSHPVKASSKDYTTGFRYMLTPniTFEYVHNSTKKSENHSTIVDESFLY 163
                 44445555555555555556666666555555555555566666666555554 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.0059
      DUF508   5 kkvvssstssssssavsssktsdssyvslPty 36 
                 k  vs+s sss+s ++ ss++s+ss +s+ t 
  EPX73403.1 244 KIDVSASPSSSKSASSGSSSSSSSSASSIITA 275
                 55677777887777777777788888887654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (294 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       927  (0.0517039); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2092.31
//
Query:       EPX73404.1  [L=564]
Description: transcription factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      9e-09   35.3  10.0    2.1e-08   34.1  10.0    1.6  1  Zn_clus   Fungal Zn(2)-Cys(6) binuclear cluster domain
  ------ inclusion threshold ------
       0.16   12.1   1.4       0.44   10.7   0.3    2.3  2  DUF5494   Family of unknown function (DUF5494)
       0.32   11.3   3.9        5.8    7.3   0.1    3.5  3  PRANC     PRANC domain


Domain annotation for each model (and alignments):
>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.1  10.0   3.6e-12   2.1e-08       1      33 [.      16      46 ..      16      51 .. 0.94

  Alignments for each domain:
  == domain 1  score: 34.1 bits;  conditional E-value: 3.6e-12
                SS-HHHHHCT---STSSSS-HHHHHCTHHHCCC CS
     Zn_clus  1 haCdnCrkkKvKCdakkPaCsnCkklnleCtfy 33
                +aC  Cr +KvKC+++ P Cs+C ++n +C  y
  EPX73404.1 16 KACLKCRLRKVKCNRQYP-CSRCNESNDTCI-Y 46
                59****************.***********9.6 PP

>> DUF5494  Family of unknown function (DUF5494)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.3   7.4e-05      0.44      22      63 ..     414     457 ..     405     478 .. 0.78
   2 ?   -1.4   0.0      0.43   2.6e+03      66      83 ..     506     523 ..     490     524 .. 0.67

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 7.4e-05
     DUF5494  22 rfniyhyvstvk..kvketerellrltqtwkairlisynsvgis 63 
                 r n+y+y  tv    v + e+ l  ltqt k +  i  ns+ i 
  EPX73404.1 414 RKNLYQYYITVSpaSVPNYEKLLQNLTQTLKQLTRIITNSINIF 457
                 779999999996336889999999*********99999**9985 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.43
     DUF5494  66 rltsrlihklhellngli 83 
                   + rl +k+++ll+ li
  EPX73404.1 506 NYSHRLWKKMYDLLQVLI 523
                 346799999999998887 PP

>> PRANC  PRANC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.1     0.027   1.6e+02      69      95 ..     218     244 ..     209     246 .. 0.80
   2 ?    7.3   0.1   0.00096       5.8      28      65 ..     423     460 ..     399     468 .. 0.79
   3 ?   -0.3   0.1      0.23   1.4e+03      40      63 ..     497     520 ..     472     530 .. 0.67

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.027
       PRANC  69 kslWnlLPiEIkykIleyLndkdLknl 95 
                   + n++  EI  kI ++L+d+d++ l
  EPX73404.1 218 GKNVNNICSEIDSKINNFLQDEDVNRL 244
                 567799999*************99876 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.00096
       PRANC  28 lkklkslkiYgklikkiiksakkrykliekaievlnni 65 
                  ++  s+++Y+kl++++ +++k+  ++i ++i++ +++
  EPX73404.1 423 TVSPASVPNYEKLLQNLTQTLKQLTRIITNSINIFEEY 460
                 2233499**************************99987 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.23
       PRANC  40 likkiiksakkrykliekaievln 63 
                  i+ iik   + ++l +k+++ l+
  EPX73404.1 497 AIQAIIKRTNYSHRLWKKMYDLLQ 520
                 466677777777777776666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (564 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       819  (0.0456802); expected 358.6 (0.02)
Passed bias filter:                      492  (0.0274416); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 3993.17
//
Query:       EPX73405.1  [L=558]
Description: hypothetical protein SOCG_02630 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.6e-60  203.3  44.1      7e-60  203.0  44.1    1.0  1  AA_permease_2    Amino acid permease
    4.7e-18   65.0  39.6    7.3e-18   64.4  39.6    1.3  1  AA_permease      Amino acid permease
  ------ inclusion threshold ------
        8.2    6.5  14.5       0.66   10.0   0.4    4.4  5  Phage_holin_3_6  Putative Actinobacterial Holin-X, holin supe


Domain annotation for each model (and alignments):
>> AA_permease_2  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  203.0  44.1   1.2e-63     7e-60       1     423 [.      67     511 ..      67     513 .. 0.85

  Alignments for each domain:
  == domain 1  score: 203.0 bits;  conditional E-value: 1.2e-63
  AA_permease_2   1 lsllsafalvigsvigsgifvkn...laasggpalilwvwiavligslavllvyaElssalprsgGiyvytkaa....fgkkvaflsawfnwfayv 89 
                    lsl++ f ++++++  +++++++   ++ ++g+  +lw w++++ ++++ +l +aE++salp+sgG+y  ++ +    +g+++ ++++w+n ++ v
     EPX73405.1  67 LSLFGIFSIAFSVLGLLPSVASTlsfSLSYVGTPGLLWAWLIAIFFLICIALSMAEICSALPTSGGLYYAAAVFapegWGPLASWITGWSNYIGNV 162
                    678888888888886666666555556888***************************888********9998884444689999************ PP

  AA_permease_2  90 pvlasilsvaasyllnalgp...dlqgntwltyliaiaililvalinirgikesakiqnilgilkillpliiliilglitv.dgggfsslstetdt 181
                    ++ +s++s+aas++l+a++    ++ +++++++l+ ++i   ++++ ++ +k ++ki+ + + ++il +l+i+  + + ++ + + f+  +  +  
     EPX73405.1 163 IGQPSVNSSAASMILGAVSInrpSYSPSNYQVFLLSVGIQCMHCFLASLPTKYISKINRVNTFINIL-FLFIAAFAIIGYAaKDDKFTHGTYPWRE 257
                    **************999754445*************************************9999996.4444444444444145566643333433 PP

  AA_permease_2 182 ffpn.gwp.g..vllgllivlwsfdGfesaanvsee.vkk.kdvpkaifigllivlvlyllvniaflgvvpddeianlsnlgsvaalffeavggkv 271
                    + ++  wp g  vll++ +++w+++G+++  + see +k   ++pkai++ ++i +++++l+++++ + + d     + ++g++++ ++ +v  k 
     EPX73405.1 258 IKNTtNWPnGfaVLLSFNGAIWTMSGYDAPFHLSEEcAKAsVNAPKAIVLTAVIGGIVGWLMQVLVSYTIVDVHALMT-GSGNMWTNYLSQVMPKR 352
                    4444244442346999999*****************7776559**********************9999999776543.34679*********99* PP

  AA_permease_2 272 vaiivvilialsllgaintavigssrvlealardgvlP..rffakvn.kfgspiraiiltaivslillllfllassaaynfllsvsslgliisyll 364
                    +a+++  l+++s l ++ + +i+ssr++++ ardg+lP   ++ kvn ++++p++a+ ++ i+s +++l++l+a s+  ++++sv+++++++ +++
     EPX73405.1 353 AAVAILSLTIFSTLMMGQSSLIASSRIAYSYARDGILPfsGWIGKVNyQTKTPVNAVLCNGIIS-FCILFLLFAGSETSSAVFSVGAVAAFSAFTI 447
                    ****************************************************************.555566667799******************* PP

  AA_permease_2 365 liigalilrkkrphl.kr....pgkilvaiigalfllfllvalffppkgpatqssliytiiltv 423
                    +i+ +++  k+++   +     ++  +++++++ f+ +++ +l+fp+++   ++++++t+++++
     EPX73405.1 448 PIFIRVFCMKDSEFHrGPwnlgKYSRPIGALACAFVALMIPVLCFPNDKNPSPKTMNWTCLVYG 511
                    **********98854244465555569********************************99876 PP

>> AA_permease  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.4  39.6   1.2e-21   7.3e-18      18     382 ..      89     447 ..      76     523 .. 0.78

  Alignments for each domain:
  == domain 1  score: 64.4 bits;  conditional E-value: 1.2e-21
  AA_permease  18 glgvvlsqaGplgallayllagvviflvmlslgeiatngpksggfyt....yasrflgpelGfviGln.ylfswitvlaleltaasiliqfwelvtdl 110
                   l++ ls +G  g+l a+l+a++++++++ls++ei ++ p sgg y+    +a + +gp +++ +G++ y  + i +  +   aas++++ ++ +   
   EPX73405.1  89 TLSFSLSYVGTPGLLWAWLIAIFFLICIALSMAEICSALPTSGGLYYaaavFAPEGWGPLASWITGWSnYIGNVIGQPSVNSSAASMILGAVSIN-RP 185
                  577889999999****************************9999875444488999999999999999788888888888899999999999542.22 PP

  AA_permease 111 pkawvt......gavflvvlliinlvgvkvygeaefi..lalikiiaiiafiivgiillaggkpnkgagfrflgdngsifknnlppgfakeeegafkn 200
                  ++          ++ + ++ +++  +  k+  ++  +  ++ i+++ i+af i+g     ++k ++g   ++ + +  +   n p+g        f +
   EPX73405.1 186 SYSPSNyqvfllSVGIQCMHCFLASLPTKYISKINRVntFINILFLFIAAFAIIG-YAAKDDKFTHG---TYPWREIKNTT-NWPNG--------F-A 269
                  2222221223335555555555556666666666666767777777777777777.34455555555...55555555333.44555........3.6 PP

  AA_permease 201 fisvfvivvfaftGielvaiiagEvkdPeksiPkailqvviritifYvlsllligllvprndlgllndsasaaspfvifikesgvsvlaplinavilt 298
                  ++  f  ++ +++G+ +   +++E++  + + Pkai  + ++ +i+  l+ +l++ ++++     + + +       ++++  + + +a+ i  +++ 
   EPX73405.1 270 VLLSFNGAIWTMSGYDAPFHLSEECAKASVNAPKAIVLTAVIGGIVGWLMQVLVSYTIVDVHALMTGSGN----MWTNYLSQVMPKRAAVAILSLTIF 363
                  7788999***************************************************999977777555....579********************* PP

  AA_permease 299 aalssansslysasRvlyslakdglaP...kvlkkvskrgvPlraillsmiisllalllaslnlaapivfnfllaisaliglivwll 382
                  ++l+++ ssl+++sR+ ys+a+dg++P   +++k+  + + P++a+l   iis+ +l+l  + ++  ++   + a++a++++    +
   EPX73405.1 364 STLMMGQSSLIASSRIAYSYARDGILPfsgWIGKVNYQTKTPVNAVLCNGIISFCILFLLFAGSETSSAVFSVGAVAAFSAFT---I 447
                  *****************************99999999**********999999887755555555336665555555555554...4 PP

>> Phage_holin_3_6  Putative Actinobacterial Holin-X, holin superfamily III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.4   0.00011      0.66      20      84 ..      53     120 ..      44     139 .. 0.71
   2 ?   -1.2   0.0      0.34     2e+03      76      86 ..     229     239 ..     194     261 .. 0.56
   3 ?   -0.3   1.3      0.17     1e+03      36      70 ..     305     345 ..     290     380 .. 0.56
   4 ?   -0.9   0.3      0.28   1.7e+03      38      46 ..     432     440 ..     407     466 .. 0.52
   5 ?    2.2   0.0     0.029   1.8e+02      50      95 ..     477     533 ..     472     541 .. 0.61

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00011
  Phage_holin_3_6  20 eLakaElkeeakragsgagllgaagvlallalllllvalalala.a....lwlaalivaavllvlagvla 84 
                      eLa +  k+e +r +s+ g++ +a   +l  l+++  +l + l+ +    l +a li a+++l+  ++ +
       EPX73405.1  53 ELADLGYKQEFRRQLSLFGIFSIAFS-VLGLLPSVASTLSFSLSyVgtpgLLWAWLI-AIFFLICIALSM 120
                      78888889999999999999996654.455567777777777776677855555555.555555554443 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.34
  Phage_holin_3_6  76 llvlagvlalv 86 
                      l++  +++a++
       EPX73405.1 229 LFLFIAAFAII 239
                      22222222222 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.17
  Phage_holin_3_6  36 gagllgaagvlallalllllvala..lalaa....lwlaal 70 
                       ++ ++++g+++ l+ +l++ +++   al +     w  +l
       EPX73405.1 305 IVLTAVIGGIVGWLMQVLVSYTIVdvHALMTgsgnMWTNYL 345
                      34555666777777777777777444333111233444443 PP

  == domain 4  score: -0.9 bits;  conditional E-value: 0.28
  Phage_holin_3_6  38 gllgaagvl 46 
                      +++ +++v 
       EPX73405.1 432 AVFSVGAVA 440
                      111122222 PP

  == domain 5  score: 2.2 bits;  conditional E-value: 0.029
  Phage_holin_3_6  50 alllllval...alal...aa.....lwlaalivaavllvlagvlalvglkklkkak 95 
                      al++++val   +l++   +        + +l+ ++  ++  +  a+ ++k +k+ k
       EPX73405.1 477 ALACAFVALmipVLCFpndKNpspktMNWTCLVYGGPIFLTLLWYAISARKWFKGPK 533
                      333333333212233333301334456788899999999999999999999999844 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (558 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       699  (0.0389871); expected 358.6 (0.02)
Passed bias filter:                      307  (0.0171231); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 3900.41
//
Query:       EPX73406.1  [L=985]
Description: alpha-glucosidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   1.3e-140  469.5   6.5   1.3e-140  469.5   6.5    1.9  2  Glyco_hydro_31  Glycosyl hydrolases family 31
    2.6e-26   92.1   0.0    6.2e-26   90.9   0.0    1.7  1  NtCtMGAM_N      N-terminal barrel of NtMGAM and CtMGAM, malta


Domain annotation for each model (and alignments):
>> Glyco_hydro_31  Glycosyl hydrolases family 31
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.1      0.04   3.6e+02     137     213 ..     137     209 ..      97     256 .. 0.64
   2 !  469.5   6.5  1.4e-144  1.3e-140       1     440 []     299     857 ..     299     857 .. 0.95

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.04
                     C.TSSEEEEB-TTSHHHHHHHHHHHHHHHC.TCT--EEEE-STTTB.SCCCCHH.HHCCCTSCETTCCHHHHCCCHHHHH CS
                     x.xxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_31 137 k.wpgstafpDftnpearewwkkelkkfll.dlgvdglwiDmnepsnfeegsds.eekeaketkaagshydvhnlygllm 213
                     + w  +  + D+t+p+ r++      +f++ + +++++    ++ ++  +  ++    ++++ + +++  +  nlygl +
      EPX73406.1 137 DvW-DAPLYHDLTHPSNRSY------SFFYnSDPFEFWVVRTTDNEVLFDSRGHpLIFQDQYIELTTNMVENYNLYGLAE 209
                     224.56899**********4......344423589999887655444333333323333322333333455556666554 PP

  == domain 2  score: 469.5 bits;  conditional E-value: 1.4e-144
                     EEEE-..SSHHHHHHHHHHHH-------GGGGSEEEE-TT--SHHHHHHHHHHHHHTT--EEEEEESCGGSBTTCCTB-.TTTSS.-H.HHHHHH CS
                     xxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xx.xxxxxx RF
  Glyco_hydro_31   1 yvflG..ptpkevvkqyteltGrpalpPrwalGfhqsrygykdeeeveevvdkfreagiPldvivlDidymdkrkdftwdkerFp.dp.kemvde 91 
                     y++ G  ++pk+ v+q+ + +G+p ++++w+lGfh sr+gy++ +++ +v + f++ +iP+d++++D dym  ++dft+d+ +++ d   +++++
      EPX73406.1 299 YIYIGgsDDPKKTVSQFVKSIGTPSMQQYWTLGFHISRWGYSNVSDILDVRKGFSDFQIPVDTFWNDLDYMYMYRDFTVDPISYSkDSmIDFFKS 393
                     666665789***************************************************************************96546888889 PP

                     HHHTT-EEEEEE-SEE.E.-T......TSHHHHHHHHTTSBECCCCCS.TCEC.TSSEEEEB-TTSHHHHHHHHHHHHHHHCT........CT-- CS
                     xxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxx.xxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxx........xxxx RF
  Glyco_hydro_31  92 lhekgvklvvivdpaiskqee......eyeafdegkekgvflknkdgs.ykgk.wpgstafpDftnpearewwkkelkkflld........lgvd 170
                     +++ ++++v+i+d+ai+++++      +y ++ +g e++vf+kn++gs y+g+ wpg+t+fpDftnp+   +wk+ l +   d          + 
      EPX73406.1 394 IESTHQHYVPIIDAAIYAANPnnksddSYYPYYKGIEDDVFIKNPNGSiYVGNvWPGYTVFPDFTNPASSTYWKDCLLNLTHDfganstsfPTYT 488
                     9889**********9998888999999999******************999999********************877665555778888865789 PP

                     EEEE-STTTB.SCCCCHH.HHCCCTS..................................................................... CS
                     xxxxxxxxxxxxxxxxxx.xxxxxxx..................................................................... RF
  Glyco_hydro_31 171 glwiDmnepsnfeegsds.eekeake..................................................................... 195
                     glwiDmnep +f+ gs+  ++ ++++                                                                     
      EPX73406.1 489 GLWIDMNEPTSFCVGSCGsGRLDENPvhvafvlegetnnvvytypegfnitnateyssiytsslsqyhatatssleivkasptpmnvkpeyninn 583
                     9*****************88888877********************************************************************* PP

                     .......................CETTCC.HHHHCCCHHHHHHHHHHHHHHHHTTTST-EEEESSEETTGGGCTEEE--S-BSSHHHHHHHHHHH CS
                     .......................xxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_31 196 .......................tkaags.hydvhnlygllmakatyeglkekkpkkrpfiltRstfaGsqryaahWsGdnassWeslresipal 266
                                            t  +g+  y++ n+yg+ makaty +l++  ++krpfil+Rstf++s+ryaahW+Gdn+s W+++ +sip++
      EPX73406.1 584 ppyalsieqgngdlaneglstnaTYFDGTvRYNLFNIYGYGMAKATYGALSSIYENKRPFILSRSTFLSSGRYAAHWLGDNYSLWSNMFFSIPGM 678
                     ****************999776555555589**************************************************************** PP

                     HHHHTTT--SEEEECT-SG.HCHHHHHHHHHHHHTTSSSEEE--STTSS--SHHHHCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHH---SEE- CS
                     xxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_31 267 lsfslsGvpfwgaDigGFe.ntteelyaRWvqlGafsPffrnHsskdakrqepwafgeeveeaarkaielRyrLlPylYtlfyeahetglpvvrp 360
                     l+f+++G+p++gaD +GF  nt+e+l++RW++++afsPffrnH+s ++++qep+++++ v+e++r+a+ +Ry+LlPy+Ytl+ +ah++g p++r+
      EPX73406.1 679 LTFNMLGLPMVGADACGFMgNTDEDLCSRWMAMAAFSPFFRNHNSLGSISQEPYRWES-VAESSRRAMSIRYSLLPYWYTLMKDAHSDGFPMLRA 772
                     ******************99************************************99.************************************ PP

                     HHHH-TT-CCCCC--S-EEETTTEEE----STT-SEEEEEE-SS...EEEETTT--EEES..SEEEEEE--TTSS-EEEETTEEE CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_31 361 lflefpedektfdiddqfmfGdsLLvaPvleeeatsvevyLPgg...kWydfwtgekyeg..gqtveltapldeiplfvraGaIi 440
                     lf+efp++++++++d+qfm+Gd+LL++Pvle++ ++v+ ++Pg+   kWyd+++++++e   g++v+l apl++i++ +r+G+Ii
      EPX73406.1 773 LFFEFPNEKNLAAVDRQFMVGDALLITPVLEPNVSHVQGVFPGNsstKWYDWYNHTVIERqpGENVTLYAPLEHINVAIRGGKII 857
                     *********************************99*******7779*********9999976667788899988**********8 PP

>> NtCtMGAM_N  N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.9   0.0     7e-30   6.2e-26       3     115 ..      86     198 ..      84     199 .. 0.86

  Alignments for each domain:
  == domain 1  score: 90.9 bits;  conditional E-value: 7e-30
  NtCtMGAM_N   3 tadlklagsacsvygndieelkleveyetddrlrvkItdannkryevpee..llprpssssssssksdnkelevsvtnepFgfkvtRkstgevlfdtsg 99 
                  a l l+g +c  ygnd+++l l+v+y+t dr+++ I d + k++   ++  + + p  ++   ++ +n+++++ ++++pF+f v+R+ ++evlfd++g
  EPX73406.1  86 LAILALRGPPCYAYGNDYSHLLLNVSYDTVDRIHISISDLQGKQFRFTNRsdVWDAPLYHDL--THPSNRSYSFFYNSDPFEFWVVRTTDNEVLFDSRG 182
                 5789999********************************98888888866224455554443..3455566**************************** PP

  NtCtMGAM_N 100 gplvfedqflqlstkl 115
                 +pl+f+dq+++l+t++
  EPX73406.1 183 HPLIFQDQYIELTTNM 198
                 **************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (985 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       411  (0.0229238); expected 358.6 (0.02)
Passed bias filter:                      311  (0.0173462); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.30s 00:00:00.96 Elapsed: 00:00:00.43
# Mc/sec: 6817.34
//
Query:       EPX73407.1  [L=55]
Description: hypothetical protein SOCG_02632 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
     0.0048   17.0   1.1      0.005   17.0   1.1    1.0  1  Adeno_PIX      Adenovirus hexon-associated protein (IX)
  ------ inclusion threshold ------
      0.059   12.6   0.1      0.059   12.6   0.1    1.0  1  GCH_III        GTP cyclohydrolase III
       0.26   11.8   5.3       0.35   11.3   5.3    1.2  1  K_channel_TID  Potassium channel Kv1.4 tandem inactivation do


Domain annotation for each model (and alignments):
>> Adeno_PIX  Adenovirus hexon-associated protein (IX)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   1.1   8.4e-07     0.005      48      88 ..      12      52 ..       6      55 .] 0.62

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 8.4e-07
   Adeno_PIX 48 gtpletaasaaasaaaatargivtdfaflsplassaasrss 88
                 t l +aa+aaa++a+ata  i   f    pl   a s s 
  EPX73407.1 12 ETDLFAAAAAAAATATATAIAIRFVFFVCFPLQVYANSNSK 52
                45565666666555555555555555556788888888775 PP

>> GCH_III  GTP cyclohydrolase III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   9.8e-06     0.059      19      55 ..       3      39 ..       1      50 [. 0.91

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 9.8e-06
                --HHHHHHHHHHHHHHHHHHHHTTT-EEE-TTSSEEE CS
     GCH_III 19 rreadlqalqarlyadlqkelaardGlvfatRfDnll 55
                +re + q++ ++l+a+++  +a+    ++a+Rf  ++
  EPX73407.1  3 KREKERQVIETDLFAAAAAAAATATATAIAIRFVFFV 39
                799******************************7665 PP

>> K_channel_TID  Potassium channel Kv1.4 tandem inactivation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   5.3   5.9e-05      0.35      28      50 ..       4      29 ..       2      33 .. 0.58

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 5.9e-05
  K_channel_TID 28 rerer...lahsraaaaaavaaaaaa 50
                   re+er    ++  aaaaaa+a+a+a+
     EPX73407.1  4 REKERqviETDLFAAAAAAAATATAT 29
                   89999744333445555555555543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (55 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       762  (0.042501); expected 358.6 (0.02)
Passed bias filter:                      333  (0.0185733); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.34u 0.25s 00:00:00.59 Elapsed: 00:00:00.39
# Mc/sec: 426.08
//
Query:       EPX73408.1  [L=548]
Description: proline specific permease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   5.1e-133  444.2  46.7   5.8e-133  444.0  46.7    1.0  1  AA_permease    Amino acid permease
    6.5e-35  120.8  48.5      8e-35  120.5  48.5    1.0  1  AA_permease_2  Amino acid permease
  ------ inclusion threshold ------
        2.2    8.6   6.7       0.89    9.8   0.5    3.1  2  Adeno_E3B      Adenovirus E3B protein


Domain annotation for each model (and alignments):
>> AA_permease  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  444.0  46.7  9.7e-137  5.8e-133       1     475 [.      42     508 ..      42     512 .. 0.98

  Alignments for each domain:
  == domain 1  score: 444.0 bits;  conditional E-value: 9.7e-137
  AA_permease   1 hvlvialggviGtglfvglgvvlsqaGplgallayllagvviflvmlslgeiatngp.ksggfytyasrflgpelGfviGlnylfswitvlaleltaa 97 
                  hv++ialgg iGtglfvg+g  l+q Gp++++lay+++ +vi+ vm+ lge+ t+ p  +++ + y+ rf++++l+f++G+ny++ +++ +a e+taa
   EPX73408.1  42 HVQLIALGGCIGTGLFVGSGQSLAQSGPASLFLAYIVMSFVIWSVMNVLGEMNTYLPiAGASPSLYIDRFVDKSLAFATGWNYWYAYVFLMASEVTAA 139
                  9********************************************************9999************************************* PP

  AA_permease  98 siliqfwelvtdlpkawvtgavflvvlliinlvgvkvygeaefilalikiiaiiafiivgiillaggkpnkga.gfrflgdngsifknnlppgfakee 194
                  +i+i++w  ++++p a +++a++l++l ++n + vk+yge+ef+la++k+++i+++ii++i++ +gg p++++ gfr++++ ++ f ++l+ g    +
   EPX73408.1 140 AIIIEYW--TESVP-AAAWIAIVLFLLAMLNSFLVKWYGETEFWLAIVKVVTIVGLIILSIVIFFGGTPKHDRlGFRYWKHGMA-FREYLVTG----G 229
                  *******..*****.*****************************************************************9999.66666666....5 PP

  AA_permease 195 egafknfisvfvivvfaft.GielvaiiagEvkdPeksiPkailqvviritifYvlsllligllvprndlgllndsasa.....aspfvifikesgvs 286
                   g++ +f ++ v + f+f  + el++i++gE++ P+++iPka++++++r+++fY+l++l+ig++v+ +d+ ll+++ ++     aspfvi i+++g++
   EPX73408.1 230 PGRLCGFWMAVVKSGFSFVlSPELITIASGETEAPRRNIPKATSRFIYRLAFFYILGTLAIGVIVSSKDPHLLSAVSKGsgsasASPFVIGIQNAGIR 327
                  889****************9******************************************************88888******************* PP

  AA_permease 287 vlaplinaviltaalssansslysasRvlyslakdglaPkvlkkvskrgvPlraillsmiisllalllaslnlaapivfnfllaisaliglivwllii 384
                  vl+++inavilt+ +ss+ns+ly++sR lysla dg aPk++k+++++gvP++++l++++i++l++l+as+++a   vf+++ ++s+++g+i w++i+
   EPX73408.1 328 VLNHIINAVILTSSISSGNSFLYAGSRSLYSLAVDGQAPKIFKRCNRWGVPYVSVLFTILIACLSFLNASSSSA--MVFTWFTNLSTISGFIAWICIL 423
                  **************************************************************************..********************** PP

  AA_permease 385 lsylrfRkalkyqgrsieelgfkaallplgvilvlaaliiillilalyayltvkkgpkdwgaasfaaaylivllfliilvgvklhvknkrp 475
                  ++ylrfR+a+ ++++ +++++f+++++p+ ++++++++++i++++++  ++        + a+sf+aay+++++fl++++g+kl++kn++ 
   EPX73408.1 424 ITYLRFRRAMVKENM-LNLMPFRSPFQPYASYITIFIVSLITITNGFPVFVG-----HHFTASSFIAAYITLPIFLVLYLGHKLFTKNWKW 508
                  ***************.88*******************************999.....99******************************85 PP

>> AA_permease_2  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.5  48.5   1.3e-38     8e-35       7     423 ..      44     491 ..      38     494 .. 0.76

  Alignments for each domain:
  == domain 1  score: 120.5 bits;  conditional E-value: 1.3e-38
  AA_permease_2   7 falvigsvigsgifvkn..laasggpa.lilwvwiavligslavllvyaElssalprsgG.iyvytkaafgkkvaflsawfnwfayvpvlasilsv 98 
                     ++++g +ig+g fv +  ++a  gpa l+l +++++++ +++v+ v+ E+ + lp  g   + y  ++  k +af ++w +w+ayv+ +a + + 
     EPX73408.1  44 QLIALGGCIGTGLFVGSgqSLAQSGPAsLFLAYIVMSFV-IWSVMNVLGEMNTYLPIAGAsPSLYIDRFVDKSLAFATGWNYWYAYVFLMA-SEVT 137
                    57999*************988888888355555555555.5**********5558887752788************************885.5555 PP

  AA_permease_2  99 aasyllnalgpdlqgntwltyliaiaililvalinirgikesakiqnilgilkillpliiliilglitvdgggfssl.........stetdt.... 181
                    aa+ ++  + +++     ++ +iai+++ l+a++n++ +k+++   ++l+i+k+ ++++ liil ++++ gg+                       
     EPX73408.1 138 AAAIIIEYWTESV----PAAAWIAIVLF-LLAMLNSFLVKWYGETEFWLAIVKV-VTIVGLIILSIVIFFGGTPKHDrlgfrywkhG----Mafre 223
                    5556666576676....35677666655.66889********************.58888888999888777766444554443321....12233 PP

  AA_permease_2 182 ffpngwpgv....llgllivlwsfdGf.esaanvsee..vkkkdvpkaifigllivlvlyllvniaflgvvpddei........anlsn..lgsva 260
                     + +g pg     +++   + +sf+   e ++  s e  ++++++pka+   +   +++y+l ++a+  +v+ +             s+  + s++
     EPX73408.1 224 YLVTGGPGRlcgfWMAVVKSGFSFVLSpELITIASGEteAPRRNIPKATSRFIYRLAFFYILGTLAIGVIVSSKDPhllsavskG--SGsaSASPF 317
                    223344432333366667777777754366666666666999*******999999999999988887665555544469855431..111244568 PP

  AA_permease_2 261 alffeavggkvvaiivvilialsllgaintavigssrvlealardgvlPrffakvnkfgspiraiiltaivslillllfllassaaynfllsvssl 356
                     +  +++g +v+ +i++++i  s++ ++n+++++ sr l++la dg  P+ f++ n++g p++++ +t +++++ +l  + +s+  +++ +++s++
     EPX73408.1 318 VIGIQNAGIRVLNHIINAVILTSSISSGNSFLYAGSRSLYSLAVDGQAPKIFKRCNRWGVPYVSVLFTILIACLSFLNASSSSAMVFTWFTNLSTI 413
                    9999********************************************************************99998887777999********** PP

  AA_permease_2 357 gliisyllliigalilrkkrphlkr.........pgkilvaiigalfllfllvalffppkgpa.tqssliyt.iiltv 423
                    + +i ++ ++i++l  r+ + +++          +  +  +i++++++l+++ ++f + +g++ t ss+i + i l +
     EPX73408.1 414 SGFIAWICILITYLRFRRAMVKENMlnlmpfrspFQPYASYITIFIVSLITITNGFPVFVGHHfTASSFIAAyITLPI 491
                    ********9999988887766654466665445433378899999999999999997788888566666666455555 PP

>> Adeno_E3B  Adenovirus E3B protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.5   0.00015      0.89      37      53 ..     414     430 ..     401     444 .. 0.81
   2 ?    0.2   0.5      0.15   9.2e+02      21      40 ..     454     473 ..     442     484 .. 0.73

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00015
   Adeno_E3B  37 iqfidwvcvriaylrhh 53 
                   fi w+c+ i+ylr  
  EPX73408.1 414 SGFIAWICILITYLRFR 430
                 56*************86 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.15
   Adeno_E3B  21 vtlilicslvtvviafiqfi 40 
                    i+i sl+t+   f  f+
  EPX73408.1 454 YITIFIVSLITITNGFPVFV 473
                 34578899999988776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (548 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       858  (0.0478554); expected 358.6 (0.02)
Passed bias filter:                      279  (0.0155614); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.63u 0.26s 00:00:00.89 Elapsed: 00:00:00.43
# Mc/sec: 3859.33
//
Query:       EPX73409.1  [L=117]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-23   83.0   5.8    1.7e-14   53.6   0.1    2.5  2  Con-6     Conidiation protein 6


Domain annotation for each model (and alignments):
>> Con-6  Conidiation protein 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.6   0.1   9.3e-19   1.7e-14       3      34 .]       5      36 ..       3      36 .. 0.95
   2 !   31.3   1.6   8.7e-12   1.6e-07       2      33 ..      80     111 ..      79     112 .. 0.94

  Alignments for each domain:
  == domain 1  score: 53.6 bits;  conditional E-value: 9.3e-19
       Con-6  3 envirGyKAtLsNPnvSeeAKehAkeeLeklg 34
                 ++i+G+KA+L+NP vSeeAK +A+e L+++g
  EPX73409.1  5 AHQIAGHKAALHNPTVSEEAKARAQEWLDSHG 36
                79***************************998 PP

  == domain 2  score: 31.3 bits;  conditional E-value: 8.7e-12
       Con-6   2 penvirGyKAtLsNPnvSeeAKehAkeeLekl 33 
                  +nv +GyKA+ +N + ++ ++e A++ L++ 
  EPX73409.1  80 LGNVRGGYKAAAHNKRNTKSGREAAEKALHEI 111
                 58***************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       632  (0.0352502); expected 358.6 (0.02)
Passed bias filter:                      307  (0.0171231); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.26s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 885.70
//
Query:       EPX73410.1  [L=79]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.1e-36  121.9   6.2      1e-17   63.9   0.7    2.1  2  Con-6     Conidiation protein 6


Domain annotation for each model (and alignments):
>> Con-6  Conidiation protein 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.9   0.7   5.6e-22     1e-17       1      32 [.       3      34 ..       3      36 .. 0.96
   2 !   61.4   0.6   3.2e-21   5.8e-17       1      34 []      46      79 .]      46      79 .] 0.98

  Alignments for each domain:
  == domain 1  score: 63.9 bits;  conditional E-value: 5.6e-22
       Con-6  1 dpenvirGyKAtLsNPnvSeeAKehAkeeLek 32
                +p+nv++GyKA L+NPnvS+eAK+h+ke+Le 
  EPX73410.1  3 NPGNVAGGYKASLHNPNVSDEAKQHSKEVLEH 34
                8*****************************96 PP

  == domain 2  score: 61.4 bits;  conditional E-value: 3.2e-21
       Con-6  1 dpenvirGyKAtLsNPnvSeeAKehAkeeLeklg 34
                +p+nv++GyKA+L+NP+vS+e K+h +e+Le+l+
  EPX73410.1 46 NPGNVAGGYKAALHNPHVSKETKKHDQEVLEELE 79
                8*******************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       497  (0.0277205); expected 358.6 (0.02)
Passed bias filter:                      292  (0.0162865); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.27s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 558.28
//
Query:       EPX73411.1  [L=484]
Description: aldehyde dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   8.5e-174  578.4   0.1     1e-173  578.1   0.1    1.0  1  Aldedh    Aldehyde dehydrogenase family
    2.9e-05   23.3   0.0    4.8e-05   22.6   0.0    1.2  1  LuxC      Acyl-CoA reductase (LuxC)


Domain annotation for each model (and alignments):
>> Aldedh  Aldehyde dehydrogenase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  578.1   0.1  1.2e-177    1e-173      11     462 .]      26     476 ..      18     476 .. 0.98

  Alignments for each domain:
  == domain 1  score: 578.1 bits;  conditional E-value: 1.2e-177
                 EEETTTCEEEEEEE-B-HHHHHHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHTHHHHHHHHHHHH---HHHHHH.HHHHHHHHHHHHHHHHHHHS CS
      Aldedh  11 vinPatgeviakvpaataedvdaavaaAkeafkawaklpaeeRaeiLrkaadlleerkeelaeletletGkplaeara.eveeaidvlryyaelaekle 108
                  ++Pat+evi++v  a++e+vd av+aA++afk w+k+  +eR+++L+k+ad+ e++ + l+++e+++ Gkp  + ++ +ve +i  lry+a++a+k++
  EPX73411.1  26 DVDPATEEVITEVYLAGTEEVDLAVKAARKAFKDWRKVHGSERGALLMKLADITEKHIDTLSAIEAMDSGKPKDSNARgDVEGTIALLRYCAGWADKIY 124
                 589*********************************************************************9766555******************** PP

                 EEEEEECTTEEEEEEEEE-SEEEEEE-SSSCCHHHHHHHHHHHHTT-EEEEEE-TTSHHHHHHHHHHHHHTTS-TTSEEE--SSTCCHHHHHHH-TTES CS
      Aldedh 109 gevlpssegklalvrrePlGvvgaItPWNfPlllaawklapalaaGNtvvlKPaeetplsalllaelfeeaglPkgvlnvvtgsgsevgealvehpevd 207
                 g+v+p+ ++kla+++r P+Gv+g+I+PWN+Pl++a wk+apalaaGN++++K ae+tpls l++a+l++e+g+Pkgv+n+++g g+ +g+++++hp++d
  EPX73411.1 125 GSVIPTGSEKLAYSKRIPIGVCGQIVPWNYPLNMAGWKIAPALAAGNCIIIKSAETTPLSLLYFAQLIDEVGFPKGVVNIISGLGKVAGSHIASHPGID 223
                 ******77******************************************************************************************* PP

                 EEEEES-HHHHHHHHHHHHCTTSEEEEEE---EEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHH.HT--BS-TTSTT CS
      Aldedh 208 kvsftGstevgrkiakaaaknlkrvtlElGGknplivledaDldkaveaivkgafgnaGQvCiaasrllvqesiydefveklveaa.kklkvgdplded 305
                 k++ftGstevg  i+k +++nlk vtlE+GGk+p+iv+edaD+d+av++++ g+++n+GQ+C+a sr++vqe++y+ef++k+++++ ++ k+g+p+de+
  EPX73411.1 224 KIAFTGSTEVGSTIQKLSSSNLKTVTLECGGKSPFIVFEDADIDQAVKWAAVGIVFNSGQICTANSRIYVQEKVYEEFLQKFKNHIlTDYKIGSPFDES 322
                 ************************************************************************************997899********* PP

                 -SB---SSHHHHHHHHHHHHHHHHTTSEEEE-TTE.SB-SSSTTEE--EEEES-TTTSHHHHS---SSEEEEEEESSHHHHHHHHHSSSEESEEEEE-S CS
      Aldedh 306 tdvGPliseaqlekvekyveeakeegaklllGgereeaglekgyfvePtvlanvtpdmriaqeEiFGPVlsvikfkdeeeaieiaNdteyGLaagvftk 404
                 t vGP++++ q+++v  y++ +k+ega+++lG   e++  +kgyf++P+++a++++dmri++eEiFGPV++v kf +eee+ie aNd+ yGLaa  ft+
  EPX73411.1 323 TVVGPVVNKVQYDRVLHYIDVGKKEGARVVLGN--EQTLSKKGYFIHPVIFADCSQDMRIVKEEIFGPVVAVSKFTTEEEVIENANDSIYGLAAMCFTQ 419
                 *******************************99..78899*********************************************************** PP

                 BHHHHHHHHHHS-SSEEEESSSST--TTTSEB--CGGGEES-BSHHHHHHHTEEEEEE CS
      Aldedh 405 dleraervaerleaGnvyiNdsttgaaealpfgGvkqSglGreggkegleeytevktv 462
                 +le+a+rv+++le+G+v iN++ +++++a pfgGvk+Sg+G+e g  g+e yt++ktv
  EPX73411.1 420 NLEKAHRVSDELETGMVFINSTENSDIQA-PFGGVKMSGIGSELGVPGIEMYTHLKTV 476
                 *****************************.**************************97 PP

>> LuxC  Acyl-CoA reductase (LuxC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.0   5.4e-09   4.8e-05      83     260 ..     136     305 ..     129     315 .. 0.86

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 5.4e-09
        LuxC  83 syekaqprglvlhvlsgNvpl.lpvmsilqglLvknvnllkvSssdpflaaallksladvdenhtladslsvvyfksgdtkleeeivqnaDvvvawGge 180
                  y+k+ p g+  ++++ N pl ++ + i+ +l ++n++++k+  + p     +++ + +v   + +++ +s +  k    +++       D++   G+ 
  EPX73411.1 136 AYSKRIPIGVCGQIVPWNYPLnMAGWKIAPALAAGNCIIIKSAETTPLSLLYFAQLIDEVGFPKGVVNIISGLG-KVAGSHIASHP--GIDKIAFTGST 231
                 79******************95678************************************9999999999993.33334444444..79********* PP

        LuxC 181 eaikaiseklkpgkq..likfGakvSfavvdkealeeealdkaaeraAkDiivfdQqAClspqvvfvekddkieidefaeaL 260
                 e  ++i++    + +   ++ G k  f v++ ++     +d+a++ aA  i++   q C +   ++v+   +  ++ef ++ 
  EPX73411.1 232 EVGSTIQKLSSSNLKtvTLECGGKSPFIVFEDAD-----IDQAVKWAAVGIVFNSGQICTANSRIYVQ---EKVYEEFLQKF 305
                 *******95555555015678*********9877.....*****************************...56899998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (484 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       428  (0.0238719); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.23s 00:00:00.77 Elapsed: 00:00:00.40
# Mc/sec: 3617.76
//
Query:       EPX73412.1  [L=386]
Description: NADPH dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      8e-91  304.8   0.0    3.3e-89  299.5   0.0    2.0  1  Oxidored_FMN  NADH:flavin oxidoreductase / NADH oxidase famil


Domain annotation for each model (and alignments):
>> Oxidored_FMN  NADH:flavin oxidoreductase / NADH oxidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  299.5   0.0   1.8e-93   3.3e-89       1     341 [.       9     344 ..       9     345 .. 0.90

  Alignments for each domain:
  == domain 1  score: 299.5 bits;  conditional E-value: 1.8e-93
                   CCCS-EEETTEEESSSEEE----S-TTTTTCS.HHHHHHHHHHHHHHTT-SEEEEEEEESSCCC-SCTTSEE-SSGGGHHHHHHHHHHHHHTT-EEE CS
  Oxidored_FMN   1 kLFkPikignmtLknRivmapmtrlraldkgnvledlaaeyysqraeipvtliiteaafvnpksggfdnapgiwdeeqieewrklteavhengskvv 97 
                   +LFkPikign tL++Riv ap tr ra d+   + dl+++yys ra+ p+tl+ tea+f++p  g ++n pgiw++ ++++w+k+t+avh++gs++ 
    EPX73412.1   9 NLFKPIKIGNHTLNQRIVYAPTTRFRAADDH-TPSDLMLKYYSDRAQVPGTLLTTEATFISPRAGLYPNIPGIWNDKHVQGWKKITDAVHAKGSLMS 104
                   69****************************9.6678************************************************************* PP

                   EEEE--GGGS..SCSTCEC....SS.ESSSSSTTT-.......S...CS-EE--HHHHHHHH.HHHHHHHHHHHHTT-SEEEEEE-CTSHHHHHH-T CS
  Oxidored_FMN  98 vqlwhlGreakseyladqe..vdspsdpvaldaqee......esaeevykkeltkeeikqli.qefveAAkraieAgfDgVeihganGYLlnqFlsp 185
                    qlw lGr    e l++++    sps+   l+++e        ++++v  ++lt+eeik +i +++++AA +a +AgfD Ve+h+a+GYLl+qFl+p
    EPX73412.1 105 CQLWFLGRVGSPELLKKHGldLISPSA---LYESEDskkaaeAAGNPV--RALTEEEIKSIIyEDYKNAAINALNAGFDFVEVHSAHGYLLDQFLQP 196
                   *****************9955456664...444433334777889999..**********99568******************************** PP

                   TT----STTSSSHHHHHHHHHHHHHHHHHHH-SSSEEEEEECE--STTS--HHHH.HHHHHHHCHCCEEEEEEETT-SSSSSTTS-TTTTHHHCCTT CS
  Oxidored_FMN 186 ksnkrtDeygGslenRarFllevvdaVkeavgeervgyRlSpedvvekgldfaet.aqkivllkelekrlkdgkklalvhaaeprkrgagsvrteqe 281
                    sn+rtD ygGs+e+Ra+ +le++   k               + ++ ++d++   + + ++++el+kr+ dgk+la++ ++epr++g+  v+t+  
    EPX73412.1 197 SSNQRTDSYGGSIEKRAKAVLEIIPWAKF--------------QGMKAEKDVVHPvTTFSYVVNELQKRADDGKQLAYLSLVEPRVQGNLDVNTSDI 279
                   **********************9976554..............4555566666555668899*********************************88 PP

                   .HHHHHHCCCHSSEEEE-SS--SHHHH....HHHHHTTS-SEEEESTHHHH-TTHHHHHHCCTCG CS
  Oxidored_FMN 282 .kntefvkevwkkplitvgriadeeka....aeivaegeadLvamgRefladpdlveklkkglpl 341
                    + ++fvk +wk+p+++ g+++ ++ +    +  v++++++++++ R+f ++pdlve+lkkgl+l
    EPX73412.1 280 vGSNDFVKALWKGPIVQSGNYTYDSPEfkllKADVNNDDRTMIGFSRYFTSNPDLVERLKKGLEL 344
                   8*******************998874311224456779************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (386 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       380  (0.0211947); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 3084.63
//
Query:       EPX73413.1  [L=336]
Description: galactose-1-phosphate uridylyltransferase Gal7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.6e-62  208.7   0.5    1.7e-61  207.9   0.5    1.4  1  GalP_UDP_transf  Galactose-1-phosphate uridyl transferase, N-
    1.1e-49  168.4   0.3    4.9e-49  166.3   0.4    1.8  2  GalP_UDP_tr_C    Galactose-1-phosphate uridyl transferase, C-
    0.00021   20.3   0.4       0.17   10.7   0.1    2.1  2  DUF4921          Domain of unknown function (DUF4921)
    0.00042   20.8   0.7    0.00086   19.8   0.2    1.7  2  DcpS_C           Scavenger mRNA decapping enzyme C-term bindi
     0.0039   17.9   0.1       0.02   15.6   0.0    2.1  2  HIT              HIT domain
  ------ inclusion threshold ------
      0.014   14.7   0.7       0.18   11.1   0.1    2.2  2  DUF4931          Domain of unknown function (DUF4931)


Domain annotation for each model (and alignments):
>> GalP_UDP_transf  Galactose-1-phosphate uridyl transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  207.9   0.5   5.7e-65   1.7e-61       2     184 .]       2     192 ..       1     192 [. 0.94

  Alignments for each domain:
  == domain 1  score: 207.9 bits;  conditional E-value: 5.7e-65
  GalP_UDP_transf   2 eieeddaiyashrrfnpltgewvlvsphrtkrpwqgqqekiskdtlpekDklkcyLcPgnsrangefnpkykstfvftndFpalsedsnyikte 95 
                      +++++d+   shrr+npl ++wvl+sphr krpwqg+qe i kd+++++D + cyLcPgn ra g++np+y+ t vf nd+pa+++++++  +e
       EPX73413.1   2 KFDFTDH---SHRRYNPLNDTWVLCSPHRGKRPWQGEQEDIVKDEVQNYD-PSCYLCPGNDRAMGTKNPNYTATHVFRNDYPAVKREQPDLVEE 91 
                      78999**...****************************************.***************************************9998 PP

  GalP_UDP_transf  96 aiakn........ilfkaepayGrceviifsskheltladlspkdikavvaaWqektaelka....keypkcvlifENkGaamgvsnphPHgqi 177
                      +++++        +l k++ ++G+c vi+fs++h+ltl++++ + i +vv++W++   +lk     + +++++  fENkG+amg+snphPHgq+
       EPX73413.1  92 QSHEKgqtlslksRLQKTQGVKGDCFVICFSPNHSLTLPRMEINAIMHVVETWKQLCFQLKTasseRMHYRYIEFFENKGSAMGCSNPHPHGQA 185
                      8844456666766899***************************************999987766668899************************ PP

  GalP_UDP_transf 178 waeehlp 184
                      w+ +++p
       EPX73413.1 186 WGLDYIP 192
                      ****998 PP

>> GalP_UDP_tr_C  Galactose-1-phosphate uridyl transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.48   1.4e+03      78      99 ..     155     183 ..     118     187 .. 0.61
   2 !  166.3   0.4   1.6e-52   4.9e-49       2     132 ..     199     331 ..     198     335 .. 0.97

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.48
                    HHHHHHHHHHHHCT.......S---EEEE CS
  GalP_UDP_tr_C  78 ilkklarkydnlfe.......tsfeysmG 99 
                      + +  +y + fe       +s +++ G
     EPX73413.1 155 SSERMHYRYIEFFEnkgsamgCSNPHPHG 183
                    34556778888888888888899999988 PP

  == domain 2  score: 166.3 bits;  conditional E-value: 1.6e-52
                    HHHHHHHHHHH.SS-HHHHHHHHHHHH-TTEEEE-SSEEEE--TT--STT-EEEEESS--SSGGG--HHHHHHHHHHHHHHHHHHHHHCTS---EE CS
  GalP_UDP_tr_C   2 ldsfekYfagsngsillhdyvqmelaekervvelkdsflavvpylakWPfevlllrkaevkslaeladeekedlaailkklarkydnlfetsfeys 97 
                    +++ +kYf+   g++ll dyv++e++ek+r+v ++dsf+++vpy+a WPfe+ll++k++ +sl+++ +++ +dla+ilk+l++kydnlf tsf+ys
     EPX73413.1 199 IKNMTKYFKSY-GTHLLGDYVKLEMEEKQRIVLENDSFVVLVPYWALWPFETLLISKEHLHSLMDFQEKHVQDLASILKQLTTKYDNLFCTSFPYS 293
                    678899**999.************************************************************************************ PP

                    EEEE---SCCCTT...TT--EEEEE--BCSSTTEB--- CS
  GalP_UDP_tr_C  98 mGlhqaplnaeed...nswlHaHfevpllrsatvrkie 132
                    mG+hqapl ++ed   nsw+H+Hf++pllrsa v+ + 
     EPX73413.1 294 MGIHQAPLHGTEDecnNSWFHMHFYPPLLRSASVKSFV 331
                    **********9999999*****************9986 PP

>> DUF4921  Domain of unknown function (DUF4921)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.1   5.6e-05      0.17       4      54 ..       8      58 ..       5      95 .. 0.85
   2 !    8.0   0.0   0.00037       1.1     217     301 ..     157     246 ..     136     280 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 5.6e-05
     DUF4921  4 GtikqvnPftGtevWtvpgrgnrPlsekaeetapleeedreeacafcedrk 54
                   ++ nP+  t v   p rg+rP + ++e++ + e ++ + +c  c  + 
  EPX73413.1  8 HSHRRYNPLNDTWVLCSPHRGKRPWQGEQEDIVKDEVQNYDPSCYLCPGND 58
                556789***************************99999*********8654 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.00037
     DUF4921 217 rnryvrYvavfqnWLkpaGasfdhlhkqlvaiDergvqaeaeiarlrenPnlynel.avdyaa....khnlviaendhavafagfGhryp 301
                 +  + rY+  f n     G s  h h q   +D + ++  +ei+++ +  + y      dy+     +++ ++ end  v+++ +   +p
  EPX73413.1 157 ERMHYRYIEFFENKGSAMGCSNPHPHGQAWGLDYIPTNVGEEIKNMTKYFKSYGTHlLGDYVKlemeEKQRIVLENDSFVVLVPYWALWP 246
                 455779******************************************999997551457764222267889999999999887766555 PP

>> DcpS_C  Scavenger mRNA decapping enzyme C-term binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0         3   9.1e+03      36      52 ..     125     141 ..     122     165 .. 0.58
   2 !   19.8   0.2   2.9e-07   0.00086      10      99 ..     222     317 ..     217     328 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 3
                 EEEEEESS---SGGG-- CS
      DcpS_C  36 hllvipkrdikslrdLt 52 
                 h l +p+ +i+ + ++ 
  EPX73413.1 125 HSLTLPRMEINAIMHVV 141
                 55566665555554443 PP

  == domain 2  score: 19.8 bits;  conditional E-value: 2.9e-07
                 TSS-B-EEEE-SSEEEEE-SS-SSSEEEEEEESS---SGGG--TTTTTHHHHHHHHHHHHHHHTT-T-EEEEE--SCCCT-........-S-S--EEE CS
      DcpS_C  10 gkepervvyedekfvvlkDikpkaklhllvipkrdikslrdLtkehlpllkemrekakkvieekynevdaeelrvgvhyqP........svyhlHlHv 99 
                 ++e++r+v+e+++fvvl  + +  ++  l i+k++++sl d++++h++ l+++ +++ +  ++ +  + +    +g+h +P          + +H+H+
  EPX73413.1 222 MEEKQRIVLENDSFVVLVPYWALWPFETLLISKEHLHSLMDFQEKHVQDLASILKQLTTKYDNLF--CTSFPYSMGIHQAPlhgtedecNNSWFHMHF 317
                 6789*************************************************999998888877..6788899999999988877766344455554 PP

>> HIT  HIT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.79   2.4e+03      31      66 ..     128     155 ..     115     182 .. 0.51
   2 !   15.6   0.0   6.8e-06      0.02       3      66 ..     223     286 ..     221     317 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.79
                 EEESSTGCSGGGCCHHHHHHHHHHHHHHHHHHHTCT CS
         HIT  31 vipkkhlselhdlteeelakllsavkkvakalqkkf 66 
                          l  ++ +++++++++ k+++ +l++  
  EPX73413.1 128 T--------LPRMEINAIMHVVETWKQLCFQLKTAS 155
                 3........334444555555555555555555544 PP

  == domain 2  score: 15.6 bits;  conditional E-value: 6.8e-06
                 CC-CCEEEE-SSEEEEE-SS-SSSSEEEEEESSTGCSGGGCCHHHHHHHHHHHHHHHHHHHTCT CS
         HIT   3 eipstvvyeddlvlafldidpkapghlLvipkkhlselhdlteeelakllsavkkvakalqkkf 66 
                 e+++++v+e+d +++++   + +p  +L+i k+hl  l d++e+ +++l s+ k++ ++  + f
  EPX73413.1 223 EEKQRIVLENDSFVVLVPYWALWPFETLLISKEHLHSLMDFQEKHVQDLASILKQLTTKYDNLF 286
                 88999***********************************************999988877655 PP

>> DUF4931  Domain of unknown function (DUF4931)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1     6e-05      0.18      90     127 ..     157     194 ..     134     232 .. 0.83
   2 ?    2.1   0.1     0.033        98      70      89 ..     253     272 ..     220     299 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 6e-05
     DUF4931  90 kseeyksvllfknhGPlsGGsikhahmqivGlkeldye 127
                 ++ +y+ + +f n G   G s  h+h q  Gl+++  +
  EPX73413.1 157 ERMHYRYIEFFENKGSAMGCSNPHPHGQAWGLDYIPTN 194
                 5678999*************************998543 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.033
     DUF4931  70 seehlrellrfgvkhwlele 89 
                 s+ehl++l+ f  kh ++l 
  EPX73413.1 253 SKEHLHSLMDFQEKHVQDLA 272
                 89**********99999885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (336 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       752  (0.0419432); expected 358.6 (0.02)
Passed bias filter:                      608  (0.0339115); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 2373.88
//
Query:       EPX73414.1  [L=165]
Description: galactose-1-phosphate uridylyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.4e-46  158.5   0.2    2.7e-46  158.3   0.2    1.0  1  GalP_UDP_transf  Galactose-1-phosphate uridyl transferase, N-
  ------ inclusion threshold ------
      0.037   12.8   0.1      0.043   12.6   0.1    1.1  1  DUF4921          Domain of unknown function (DUF4921)


Domain annotation for each model (and alignments):
>> GalP_UDP_transf  Galactose-1-phosphate uridyl transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.3   0.2     3e-50   2.7e-46       2     149 ..       2     153 ..       1     164 [. 0.92

  Alignments for each domain:
  == domain 1  score: 158.3 bits;  conditional E-value: 3e-50
  GalP_UDP_transf   2 eieeddaiyashrrfnpltgewvlvsphrtkrpwqgqqekiskdtlpekDklkcyLcPgnsrangefnpkykstfvftndFpalsedsnyikte 95 
                      +++++d+   shrr+npl ++wvl+sphr krpwqg+qe i kd+++++D + cyLcPgn ra g++np+y+ t vf nd+pa+++++++  +e
       EPX73414.1   2 KFDFTDH---SHRRYNPLNDTWVLCSPHRGKRPWQGEQEDIVKDEVQNYD-PSCYLCPGNDRAMGTKNPNYTATHVFRNDYPAVKREQPDLVEE 91 
                      78999**...****************************************.***************************************9998 PP

  GalP_UDP_transf  96 aiakn........ilfkaepayGrceviifsskheltladlspkdikavvaaWqektaelka 149
                      +++++        +l k++ ++G+c vi+fs++h+ltl++++ + i +vv++W++   +lk 
       EPX73414.1  92 QSHEKgqtlslksRLQKTQGVKGDCFVICFSPNHSLTLPRMEINAIMHVVETWKQLCFQLKT 153
                      8844456666766899***************************************9888765 PP

>> DUF4921  Domain of unknown function (DUF4921)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   4.7e-06     0.043       3      54 ..       7      58 ..       5      96 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 4.7e-06
     DUF4921  3 DGtikqvnPftGtevWtvpgrgnrPlsekaeetapleeedreeacafcedrk 54
                D   ++ nP+  t v   p rg+rP + ++e++ + e ++ + +c  c  + 
  EPX73414.1  7 DHSHRRYNPLNDTWVLCSPHRGKRPWQGEQEDIVKDEVQNYDPSCYLCPGND 58
                5566889***************************99999*********8654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       510  (0.0284455); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.44
# Mc/sec: 1118.41
//
Query:       EPX73415.1  [L=365]
Description: nucleotide-sugar 4,6-dehydratase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.8e-63  212.5   0.0    1.1e-62  212.3   0.0    1.0  1  GDP_Man_Dehyd    GDP-mannose 4,6 dehydratase
    4.9e-47  160.4   0.0    5.7e-47  160.2   0.0    1.1  1  Epimerase        NAD dependent epimerase/dehydratase family
    1.2e-11   44.3   0.0    2.9e-11   43.0   0.0    1.6  1  NAD_binding_4    Male sterility protein
    1.2e-07   31.2   0.0    2.7e-05   23.4   0.0    2.1  2  Polysacc_synt_2  Polysaccharide biosynthesis protein
    3.1e-06   26.5   0.0    6.5e-06   25.5   0.0    1.6  1  RmlD_sub_bind    RmlD substrate binding domain
    0.00016   20.8   0.1     0.0027   16.7   0.1    2.1  1  3Beta_HSD        3-beta hydroxysteroid dehydrogenase/isomeras
  ------ inclusion threshold ------
      0.011   15.2   0.0       0.36   10.2   0.0    2.1  2  adh_short        short chain dehydrogenase


Domain annotation for each model (and alignments):
>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  212.3   0.0   4.4e-66   1.1e-62       1     331 [.      12     358 ..      12     359 .. 0.83

  Alignments for each domain:
  == domain 1  score: 212.3 bits;  conditional E-value: 4.4e-66
                    EEETTTSHHHHHHHHHHHHCT-CCEEEEEEESS-TTHHHHHCTTT...TTGCCEEEEE--T.T-HHHHHHHHH....HHT-SEEEE--S---HHHH CS
  GDP_Man_Dehyd   1 LiTGiaGfiGsylaelLlekgyevhgivrrsssfntgriehlakdpkeeleenlklhkgDl.tDssslerlla....evqpdevynLAAqshVdvs 91 
                    L+TG+aGfiGs+ +++L++k+ + h ++ +s +++ ++ ++  ++     ++n++++k Dl t+ s+le+ +     ++q++ ++n+AA+s+Vd+s
     EPX73415.1  12 LVTGGAGFIGSHCLDFLVSKYPQYHFTCMDSLNYASENSKKHLQNVL--GKPNFTFIKIDLvTEYSALEKFIVddfpNTQITHIINFAAESCVDRS 105
                    9***************************9999999999887777664..579********8567899999865122257***************** PP

                    TTSHHHHHHHHTHHHHHHHHHHHHC.....T..TTSEEEEEEEGGGG-S-S.SSSB-TTS-----SHHHHHHHHHHHHHHHHHHHH---EEEEEE- CS
  GDP_Man_Dehyd  92 fekPeytaevnvlGtlrLLeairal.....glekkvrfyqaStsEvYGkvq.evpqtEttpfyPrsPYaaaKlyadwivvnyreayglfavngilf 181
                    f++P  ++++n+l +++LLe+ r l     +l++++ f+++St+EvYG++  +   +E+  ++P++PYaa+K++ d iv++y+ +y+l++v  +  
     EPX73415.1 106 FQNPIFFVKNNILCAQHLLECSRLLldrypHLHREFTFLHISTDEVYGEQGvHENAKENSALRPTNPYAASKAATDLIVQSYYYSYNLPVVMIRAN 201
                    ***********************98766666789****************945558**************************************** PP

                    EEESTTS-TT....SCCCHHHHHHHHHHTTS..-C-EECTTTT-EEEEEEHHHHHHHHHHHHHCSS---EE.....E-TT-EEECHHCHHCCHHCC CS
  GDP_Man_Dehyd 182 nhesprrget....fvtrkitravarialgk..qevlylGnldakRdwghvkDyveamwlmlqqdkpedyv.....iatgethsvrefvelaflel 266
                    n ++pr++++    +  +k+ +++++ +++    ++++ G++++kR ++hv D+ +a++l+ ++++++         a  ++++v++  el + +l
     EPX73415.1 202 NIYGPRQHNEklvpMTINKLHLFLQQKNHDVmlDKITIHGDGSQKRKYLHVYDFLTALDLVWKKQRKNVSAsstprPAGPQVFNVGSDDELDNYSL 297
                    *******97654444556666666665555442455667***********************98776544422222566789************** PP

                    CHHHHHH............TTGGCCCEECGG--SS--SB--B-THHHHHHH----SS-HHHHHHH CS
  GDP_Man_Dehyd 267 gktiewegkgeeevgrakesgkvvvevdpkyfrpgevdlllgdaskakeeLgWkpkvsfeelvre 331
                    +k+i+    +++     +++ ++   + ++++r  ++ ++  + +k+k ++gW p++s++++++e
     EPX73415.1 298 VKHICNCFFKKKF---PSRKFDDSQFMVFVKNRNYNDARYSLNYDKIK-QIGWMPQISLDQGINE 358
                    ****998644333...33333444445578899999***********9.9************987 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  160.2   0.0   2.2e-50   5.7e-47       1     241 []      11     287 ..      11     287 .. 0.87

  Alignments for each domain:
  == domain 1  score: 160.2 bits;  conditional E-value: 2.2e-50
                 EEEETTTSHHHHHHHHHHHHCT..SEEEEEES-STTTTCHHCHHC........EEEE--T.T-HHHHHHHHHH....HT-SEEEE--S---HHHHHHSH CS
   Epimerase   1 ilVtGatGfiGsalvkallekg..yevigldrlssasntarledl........elveldl.tdrsalerlfke....eqpdavihlAavggvaassedp 84 
                 +lVtG++GfiGs+ ++ l +k   y+ +++d+l++as++++++          +++++dl t+ sale+++ +    +q++++i++Aa+++v++s+++p
  EPX73415.1  11 VLVTGGAGFIGSHCLDFLVSKYpqYHFTCMDSLNYASENSKKHLQnvlgkpnfTFIKIDLvTEYSALEKFIVDdfpnTQITHIINFAAESCVDRSFQNP 109
                 79*******************99999*******99998776554499************8467789999976533325999****************** PP

                 HHHHHHHTHHHHHHHHHHH.........HHTCTEEEEEEEGGGGTSCSSSSBSTCSTTS----SSHHHHHHHHHHHHHHHHHHHHT-EEEEEEESEEES CS
   Epimerase  85 adfieknlqgtlnlleaar.........kagvkrllflsSsevYGkdaeqpkeettltgplkpnspYaaaKlageklveayaaqyglnaiilrlfnlyG 174
                   f+++n+  +++lle++r          ++   +l++s++evYG++     e   +++ l+p++pYaa+K+a + +v++y  +y+l+++ +r  n+yG
  EPX73415.1 110 IFFVKNNILCAQHLLECSRllldryphlHREF-TFLHISTDEVYGEQGV--HENAKENSALRPTNPYAASKAATDLIVQSYYYSYNLPVVMIRANNIYG 205
                 *******************9999887633333.************9998..6777777799************************************** PP

                 TTS-TTSTTSHHHHHHHHHHT.....TS....SSEEEETTST-EEEEEEHHHHHHHHHHHHHHHTT-ST.........TEEEEES CS
   Epimerase 175 prngegevsrvipalirkile.....gk....qevtllgdgtalRdflyveDvaeaillvlehvdagdk.........geiyniG 241
                 pr   +++++++p  i+k+++     ++    +++t+ gdg+++R +l+v D  +a+ lv ++ +++ +         ++++n+G
  EPX73415.1 206 PR---QHNEKLVPMTINKLHLflqqkNHdvmlDKITIHGDGSQKRKYLHVYDFLTALDLVWKKQRKNVSasstprpagPQVFNVG 287
                 **...99**************776541134445*****************************96665548888887777788887 PP

>> NAD_binding_4  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.0   0.0   1.1e-14   2.9e-11       1     208 [.      13     205 ..      13     234 .. 0.87

  Alignments for each domain:
  == domain 1  score: 43.0 bits;  conditional E-value: 1.1e-14
                    EE-TTSHHHHHHHHHHHHHS-.TEEEEEE-SSSHHHHHHHHHHHT-SS-HHHHHHHHHTTTEEEEE--TTSGGGG--HHHHHHH.HHH--EEEE-- CS
  NAD_binding_4   1 lTGaTGFLGkvLlekLLrttpevkiyllvRaksgesaeeRleeelekkelfsallkelaerikvveGDlseprlGLseedlqel.aeevdviihsa 95 
                    +TG+ GF+G++ l  L+++ p+++ +++   +    a     +e  kk l+++l    + + ++++ Dl  ++  L++  +++    ++++ii+ a
     EPX73415.1  13 VTGGAGFIGSHCLDFLVSKYPQYHFTCMDSLN---YA-----SENSKKHLQNVLG---KPNFTFIKIDLVTEYSALEKFIVDDFpNTQITHIINFA 97 
                    7********************87777763222...22.....3444667777776...88999*********************899********* PP

                    SS-S.STTSSE...EHHHHHHHHHHHHHHHT.......SSS--.-EEEEEEGGGTTS-TTT--SSS-H......HHH--EEEETTTCCCHHHHHHH CS
  NAD_binding_4  96 Atvnfdepyke...llrvNveGtrevlelak.......klkklkvllhvSTayvngeregeveekvyeegekeekldederaklkglpntYeqsKa 181
                    A   +d++ ++   +++ N++ ++++le ++        l++  ++lh+ST  v+ge+                  ++ ++++    +n Y  sKa
     EPX73415.1  98 AESCVDRSFQNpifFVKNNILCAQHLLECSRllldrypHLHREFTFLHISTDEVYGEQGV---------------HENAKENSALRPTNPYAASKA 178
                    **********988889**************99999999777778*******999999994...............4567788889999******** PP

                    HHHHHHHHHHHHH---EEEEEE-EEE- CS
  NAD_binding_4 182 laEklvrearrrsglpvvivRpsiitg 208
                    + + +v+++  + +lpvv +R  +i+g
     EPX73415.1 179 ATDLIVQSYYYSYNLPVVMIRANNIYG 205
                    *************************98 PP

>> Polysacc_synt_2  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.0   1.1e-08   2.7e-05       1     115 [.      11     127 ..      11     158 .. 0.84
   2 !    5.8   0.0    0.0025       6.3     131     173 ..     166     205 ..     159     209 .. 0.85

  Alignments for each domain:
  == domain 1  score: 23.4 bits;  conditional E-value: 1.1e-08
                      EEEETTTSHHHHHHHHHHHHHB-S.EEEEEES-HHHHHHHHHH......-TTEEEE....E--TT-HHH.HHHHTT..T-SEEEE------HHH CS
  Polysacc_synt_2   1 vlvtGagGsiGselvrqilkkkpk.kiillerdElklyeiekeleeelkkkklkveivpvigdvrdker.lekaleelkvdvvfhaAAlKhVPl 92 
                      vlvtG++G iGs+ ++ +++k p+ +   +++  ++  + +k+l++ l k ++++  + ++++    e+ + + + ++++  +++ AA   V  
       EPX73415.1  11 VLVTGGAGFIGSHCLDFLVSKYPQyHFTCMDSLNYASENSKKHLQNVLGKPNFTFIKIDLVTEYSALEKfIVDDFPNTQITHIINFAAESCVDR 104
                      89***************99997763788999999999999999999999998877755555554443321445567799999************ PP

                      HHHSHHHHHHHHHHHHHHHHHHH CS
  Polysacc_synt_2  93 veenpleaiktNvlgtenvieaa 115
                        +np+  +k+N+l +++++e++
       EPX73415.1 105 SFQNPIFFVKNNILCAQHLLECS 127
                      ******************99987 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0025
                      GSS--SHHHHHHHHHHHHHHHGGG--SSS--EEEEEEE-EETT CS
  Polysacc_synt_2 131 AvnPtnvmGatKrlaekllqalakeseekktkfvvvRfGNVlg 173
                      A +Ptn + a+K+++++++q++  +    +  +v++R  N+ g
       EPX73415.1 166 ALRPTNPYAASKAATDLIVQSYYYSY---NLPVVMIRANNIYG 205
                      89******************998777...67788888777766 PP

>> RmlD_sub_bind  RmlD substrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.5   0.0   2.5e-09   6.5e-06       3     158 ..      11     210 ..       9     238 .. 0.75

  Alignments for each domain:
  == domain 1  score: 25.5 bits;  conditional E-value: 2.5e-09
                    EEEESTTSHHHHHHHHHCTTTSEEEEEE-TT.........................T--T.TSHHHHHHHH....HHH--SEEEE------HHHHH CS
  RmlD_sub_bind   3 ilvtGanGqlGseLakqlaeeglevlaltre.........................eldl.tdaeavaell....keakpdvvvnaAAytavDkaE 68 
                    +lvtG+ G +Gs+  + l ++  +++ +  +                         ++dl t+ +a+++++     +++   ++n AA   vD+  
     EPX73415.1  11 VLVTGGAGFIGSHCLDFLVSKYPQYHFTCMDslnyasenskkhlqnvlgkpnftfiKIDLvTEYSALEKFIvddfPNTQITHIINFAAESCVDRSF 106
                    78888888888887777766544444333333467777777777777777777777777624455666666444445566799************* PP

                    HSHHHHHHHHTHHHHHHHHHHH.........HCT-EEEEEEEGGGS-S-TTS-.B-TTS----SSHHHHHHHHHHHHHHH....H-SSEEEEEE-S CS
  RmlD_sub_bind  69 seeeaayavnaeavealAeaaa.........avgalLihvStDyVFdGekkrp.YeeddetsPlnvYGrtKlaGEqavla....agkkalivRtsw 150
                    +++    + n   +++l e  +         +++ +++h+StD V+  +  ++  +e+++  P n Y+++K+a    v++    ++  ++++R   
     EPX73415.1 107 QNPIFFVKNNILCAQHLLECSRllldryphlHREFTFLHISTDEVYGEQGVHEnAKENSALRPTNPYAASKAATDLIVQSyyysYNLPVVMIRANN 202
                    ***************9998876444444444789************988544438999*********************977666778899***** PP

                    EESSSSS- CS
  RmlD_sub_bind 151 vygekgkn 158
                    +yg +++n
     EPX73415.1 203 IYGPRQHN 210
                    **997776 PP

>> 3Beta_HSD  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.1   1.1e-06    0.0027       1     200 [.      12     222 ..      12     239 .. 0.65

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 1.1e-06
   3Beta_HSD   1 vvtGgaGFlGralvkeLvrleelkevrvlD.....lrespelleelskvnvkk..viegD.vtdkdkleeal......egvdvvihlaslvdvagklte 85 
                 +vtGgaGF+G++    Lv+  +  +   +D        +++++  ++ ++  +  +i+ D vt+ + le+ +       ++  +i  a+ + v   +++
  EPX73415.1  12 LVTGGAGFIGSHCLDFLVSKYPQYHFTCMDslnyaS--ENSKKHLQNVLGKPNftFIKIDlVTEYSALEKFIvddfpnTQITHIINFAAESCVDRSFQN 108
                 69*******************999999999765322..222222333333333669****556778898876322222346677888887777775555 PP

   3Beta_HSD  86 de.imkvnvkGTrnvleacv.....kagvr...vlvYtSsaevvgpnslgeeilngdEeleyeslhqdaypesKalaEklvlkaNgrtlknggrlyTca 175
                    + k n+   + +le  +     +  ++   ++++ S+ ev g+    + ++  + +++    ++++y+ sKa a +l++++         +l  + 
  EPX73415.1 109 PIfFVKNNILCAQHLLECSRllldrYPHLHrefTFLHISTDEVYGE----QGVH-ENAKENSALRPTNPYAASKA-ATDLIVQSYY----YSYNLPVVM 197
                 4315678999999999877522222111211224778899999988....5555.4445555667899*****98.5567777776....2338999** PP

   3Beta_HSD 176 LRpagiyGegdkllvpllkqlaklg 200
                 +R   iyG++++  + +  ++ kl+
  EPX73415.1 198 IRANNIYGPRQHNEKLVPMTINKLH 222
                 *********9876554444444444 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   0.00014      0.36       1      67 [.       9      80 ..       9     100 .. 0.84
   2 ?    2.7   0.1     0.028        73     147     163 ..     171     187 ..     163     205 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00014
                SEEEEESTTSHHHHHHHHHHHHT..T-EEEEEESCHHHHHHHHHHHHHT..TSEEEEEE-TTT.SHHHHHHH CS
   adh_short  1 kvvlvtGassGIGraiakelake..Gakvvvvdrseekleevakelkee..gakalaiqvDvt.dreeveal 67
                ++vlvtG+++ IG  + + l+++  +++ +++d+ + + e+ +k+l++   + ++++i++D+  +++++e++
  EPX73415.1  9 QHVLVTGGAGFIGSHCLDFLVSKypQYHFTCMDSLNYASENSKKHLQNVlgKPNFTFIKIDLVtEYSALEKF 80
                58*******************985567778899999999999*****9998889*******76366666655 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.028
                 HHHHHHHHHHHHHHHHH CS
   adh_short 147 aaYsAsKaavagltrsl 163
                  +Y+AsKaa + +++s 
  EPX73415.1 171 NPYAASKAATDLIVQSY 187
                 68*******99888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (365 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 2587.38
//
Query:       EPX73416.1  [L=687]
Description: UDP-glucose 4-epimerase/aldose 1-epimerase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      3e-67  227.0   0.9    4.1e-67  226.6   0.9    1.2  1  Aldose_epim      Aldose 1-epimerase
    1.4e-51  175.9   0.0    1.8e-51  175.5   0.0    1.2  1  GDP_Man_Dehyd    GDP-mannose 4,6 dehydratase
    7.2e-47  159.9   0.0    9.9e-47  159.4   0.0    1.2  1  Epimerase        NAD dependent epimerase/dehydratase family
    3.4e-14   52.5   0.0    6.3e-14   51.7   0.0    1.5  1  3Beta_HSD        3-beta hydroxysteroid dehydrogenase/isomeras
    5.9e-14   51.9   0.0    3.6e-12   46.0   0.0    2.4  1  Polysacc_synt_2  Polysaccharide biosynthesis protein
    2.1e-08   33.6   0.0    3.3e-08   33.0   0.0    1.2  1  RmlD_sub_bind    RmlD substrate binding domain
    3.3e-05   23.4   0.0    6.1e-05   22.6   0.0    1.4  1  adh_short        short chain dehydrogenase
    0.00014   21.8   0.0    0.00026   20.9   0.0    1.3  1  KR               KR domain
    0.00029   20.1   0.0      0.031   13.4   0.0    2.2  1  NAD_binding_4    Male sterility protein
     0.0061   16.5   0.0     0.0099   15.8   0.0    1.3  1  NAD_binding_10   NAD(P)H-binding
  ------ inclusion threshold ------
       0.11   12.3   0.1       0.25   11.2   0.1    1.6  1  VirB8            VirB8 protein


Domain annotation for each model (and alignments):
>> Aldose_epim  Aldose 1-epimerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  226.6   0.9   2.5e-70   4.1e-67       3     300 ..     370     683 ..     368     684 .. 0.92

  Alignments for each domain:
  == domain 1  score: 226.6 bits;  conditional E-value: 2.5e-70
                  EEEEETTEEEEEECTCTTEEEEEEETT.STEESB-B-STHHHHHHSC..CSSCEECSS-SEEETTEEEETTEEEECCCCBTTTCEETBSGGG...SB- CS
  Aldose_epim   3 itlkngaglsakislyGAtllslkvpdkeqrevllgsddaeeylkds..yfgatlgrvanRianGeFeldGkpyqlpqneegknplHGgarg...reW 95 
                   t+k +  l++++++yGA +++++ ++   ++++ g+++++ y +ds   fg t+gr+anRi+nG+F+++Gk+y l +n+ +  +lHGg++    + +
   EPX73416.1 370 HTVKFP-DLQVSFANYGALIQDVQYKG---QPLVVGFQEFQAYTSDSnpLFGSTVGRYANRISNGSFQIEGKTYELDKNQ-SGSTLHGGNNAynrQYF 462
                  566676.59******************...8*************************************************.*********99996556 PP

                  EEEEEEE...TTEEEEEEEEEEETCHCSTSEEEEEEEEEEETTEEEEEEEEEEESS....S-EEEEEEEEEEEETSSC.TCTGGEEEEEEEEEEEECT CS
  Aldose_epim  96 eveevke...ddgvtvslvlkpdgeegypgdlevrvtytLnednelkieyeatndg....kptpfnltnHtYFnlsge.sidshelqieadeylevde 185
                    +  k+   ++++++ l + +dg++g+p ++e+ v+yt+n+++ ++iey+   ++    ++t ++ltnH+Y+nls++ +id++ +++++d+yl++d 
   EPX73416.1 463 LGPVSKHyqdYNTLEFILLD-EDGNNGFPAEVETLVKYTVNNNS-IEIEYQSSITEnspnDATAISLTNHSYWNLSSNkTIDGTVFRLASDKYLKTDP 558
                  55555559566666666666.777899***************99.8998887777667999***************99******************** PP

                  .TSGEEEEEEECTTCCCCCCSSEEHCSSETEEEEEEEESSC..........SEEEEEETTTTEEEEEEEETTSSEEEEEECTTTT..SEECCEEESSE CS
  Aldose_epim 186 .eliptgelkdvkgtpfdfrqpkaigedlkglDhayllksk..........lkaviidpdkksgiklevsttepalvvytgnflk..kylsreglale 270
                   +++p ge+ + +++p+  +++ ++ +d+  +D++++ +++          lk ++++ +++ +ikl+v++t pa+++ytg++        r+g+++e
   EPX73416.1 559 kTQLPSGEIIS-SNEPL--TKSVKLSPDV-SFDNCFVVDESdfsldtrkreLKQIAEVSHPSNSIKLSVTSTDPAFQFYTGDNISmdPIKPRAGFCVE 652
                  ***********.55788..9*********.*****************************************************999*999******** PP

                  CTCETCCCECHHHT.-EEEHTTTEEEEEEEE CS
  Aldose_epim 271 tqmlpdepnhpefp.sivlkpGesysaetsy 300
                  + ++++++nh  ++ ++++++Ge+y +++++
   EPX73416.1 653 AGRYVNAINHASWSkQVLVHKGEVYGSKLKF 683
                  **************9************9988 PP

>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.5   0.0   1.1e-54   1.8e-51       2     331 ..       9     335 ..       8     336 .. 0.86

  Alignments for each domain:
  == domain 1  score: 175.5 bits;  conditional E-value: 1.1e-54
                    EETTTSHHHHHHHHHHHHCT-CCEEEEEEESS-TTHHHHHCTTT...TTGCCEEEEE--TT-HHHHHHHHHHHT-SEEEE--S---HHHHTTSHHH CS
  GDP_Man_Dehyd   2 iTGiaGfiGsylaelLlekgyevhgivrrsssfntgriehlakdpkeeleenlklhkgDltDssslerllaevqpdevynLAAqshVdvsfekPey 97 
                    +TG+aG+iGs+++  L+  gy+v+ i+++++s + + i++++    + +++++ +++ Dl+D+++l +++++++++ v+++ A ++V++s + P  
     EPX73416.1   9 VTGGAGYIGSHTVVELIYHGYNVIAIDNLCNSSY-EAIARIE----FLVRKSVLFYNIDLRDEKQLSHIFSSYNVQGVLHFSALKAVGESTKIPLD 99 
                    9***************************988865.5555554....33456899****************************************** PP

                    HHHHHTHHHHHHHHHHHHCT..TTSEEEEEEEGGGG-S-S....SSSB-TTS-----SHHHHHHHHHHHHHHHHHHHH---.EEEEEE-E....EE CS
  GDP_Man_Dehyd  98 taevnvlGtlrLLeairalglekkvrfyqaStsEvYGkvq....evpqtEttpfyPrsPYaaaKlyadwivvnyreayglf.avngilfn....he 184
                    ++++n+ G ++LL ++ +++++    ++++S+++vYG+++     +p+ E+ p +P++PY+ +K + + ++++ +++   +   + ++fn    h 
     EPX73416.1 100 YYDNNIYGSITLLRVMNKHNIK---TIVFSSSATVYGDATrfenMIPIPENCPNEPTNPYGKTKYVIENLIKDLQKSDPTWrGAILRYFNpigaHP 192
                    ******************9985...6889**********644335899*****************************998736789********** PP

                    STTS-TT..SCCCHHHHHHHHHHTTS-C-EEC.TTTT-EEEEEEHHHHHHHHHHHHHCSS---EEE-TT-EEECHHCHHCCHHCCCHHHHHH.... CS
  GDP_Man_Dehyd 185 sprrget..fvtrkitravarialgkqevlyl.GnldakRdwghvkDyveamwlmlqqdkpedyviatgethsvrefvelaflelgktiewegkge 277
                    s   ge+   v +++ +++a++a g++e+ly+ Gn ++  d + ++Dy+++++l+  +  + +y+  +  +  v+   e+++   + +++++    
     EPX73416.1 193 SGLIGEDplNVPNNLLPFLAQVAIGRREKLYVfGNDYESHDGTPIRDYIHVVDLAKGHIAALEYM--NSLESDVGLYREWNLGTGKGSTVFDI--- 283
                    *****9876799**************9999877********************955555544444..44455676666666555544444443... PP

                    ........TTGGCCCEECGG--SS--SB--B-THHHHHHH----SS-HHHHHHH CS
  GDP_Man_Dehyd 278 eevgrakesgkvvvevdpkyfrpgevdlllgdaskakeeLgWkpkvsfeelvre 331
                      v++ ++ + ++ +++ + +r+g+v +l +d+s+ak+eL+W +++++e+ +r+
     EPX73416.1 284 --VNAFSQASGKELPYEIVGRRDGDVLNLTADPSRAKKELNWIATMTVEQACRD 335
                    ..444455556689*************************************997 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.4   0.0   6.1e-50   9.9e-47       1     233 [.       7     261 ..       7     273 .. 0.91

  Alignments for each domain:
  == domain 1  score: 159.4 bits;  conditional E-value: 6.1e-50
                 EEEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC........EEEE--TT-HHHHHHHHHHHT-SEEEE--S---HHHHHHSHHHHHHHH CS
   Epimerase   1 ilVtGatGfiGsalvkallekgyevigldrlssasntarledl........elveldltdrsalerlfkeeqpdavihlAavggvaassedpadfiekn 91 
                 i+VtG++G+iGs++v +l  +gy+vi++d+l ++s +a  + +         ++++dl+d+++l  +f++++++ v+h+ a + v++s + p d++++n
  EPX73416.1   7 IVVTGGAGYIGSHTVVELIYHGYNVIAIDNLCNSSYEAIAR-IeflvrksvLFYNIDLRDEKQLSHIFSSYNVQGVLHFSALKAVGESTKIPLDYYDNN 104
                 89*****************************8777665544.4599***************************************************** PP

                 THHHHHHHHHHHHHTCTEEEEEEEGGGGTSCSS....SSBSTCSTTS----SSHHHHHHHHHHHHHHHHHHHH.T-EEEEEEESEEESTT......S-T CS
   Epimerase  92 lqgtlnlleaarkagvkrllflsSsevYGkdae....qpkeettltgplkpnspYaaaKlageklveayaaqy.glnaiilrlfnlyGpr......nge 179
                 + g+ +ll +++k+++k ++f sS++vYG+ ++    +p  e++   p +p++pY+ +K+ +e+l+++++++   ++  ilr+fn +G++      + +
  EPX73416.1 105 IYGSITLLRVMNKHNIKTIVFSSSATVYGDATRfenmIPIPENC---PNEPTNPYGKTKYVIENLIKDLQKSDpTWRGAILRYFNPIGAHpsgligEDP 200
                 ******************************99988866899999...99************************9********************99666 PP

                 TS.TTSHHHHHHHHHHTTS.SSEEEET......TST-EEEEEEHHHHHHHHHHHHHHHTT-S CS
   Epimerase 180 ge.vsrvipalirkilegk.qevtllg......dgtalRdflyveDvaeaillvlehvdagd 233
                  + +++++p ++++++ g+ +++ ++g      dgt+ Rd+++v D+a++++++le  ++ +
  EPX73416.1 201 LNvPNNLLP-FLAQVAIGRrEKLYVFGndyeshDGTPIRDYIHVVDLAKGHIAALEYMNSLE 261
                 664777777.88888888879***********************************977654 PP

>> 3Beta_HSD  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.7   0.0   3.8e-17   6.3e-14       1     159 [.       8     169 ..       8     263 .. 0.80

  Alignments for each domain:
  == domain 1  score: 51.7 bits;  conditional E-value: 3.8e-17
   3Beta_HSD   1 vvtGgaGFlGralvkeLvrleelkevrvlDlrespel..leelskvnvkk..viegDvtdkdkleealegvdv..vihlaslvdvag..kltedeimkv 91 
                 vvtGgaG++G++ v eL+  +   +v ++D   +++     +++ + +k+  + + D++d+++l++   + +v  v+h  +l  v    k+    +++ 
  EPX73416.1   8 VVTGGAGYIGSHTVVELIYHG--YNVIAIDNLCNSSYeaIARIEFLVRKSvlFYNIDLRDEKQLSHIFSSYNVqgVLHFSALKAVGEstKI-PLDYYDN 103
                 8********************..58889995544444003344444444488999************998776559***999999885334.4459*** PP

   3Beta_HSD  92 nvkGTrnvleacvkagvrvlvYtSsaevvgpnslgeeilngdEeleyeslhqdaypesKalaEklvlk 159
                 n++G  ++l    k++++++v+ Ssa v g+ ++ e+++   E+ +  + ++++y ++K + E+l++ 
  EPX73416.1 104 NIYGSITLLRVMNKHNIKTIVFSSSATVYGDATRFENMIPIPENCP--NEPTNPYGKTKYVIENLIKD 169
                 ***************************************8888765..56789************975 PP

>> Polysacc_synt_2  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.0   0.0   2.2e-15   3.6e-12       1     129 [.       7     129 ..       7     194 .. 0.76

  Alignments for each domain:
  == domain 1  score: 46.0 bits;  conditional E-value: 2.2e-15
                      EEEETTTSHHHHHHHHHHHHHB-SEEEEEES-HHHHHHHHHH......-TTEEEE....E--TT-HHHHHHHTT..T-SEEEE------HHHHH CS
  Polysacc_synt_2   1 vlvtGagGsiGselvrqilkkkpkkiillerdElklyeiekeleeelkkkklkveivpvigdvrdkerlekaleelkvdvvfhaAAlKhVPlve 94 
                      ++vtG++G iGs+ v +++ +  + i + +    +  +i++  e  ++k+ l ++      d+rd+++l++++++++v+ v+h  AlK V    
       EPX73416.1   7 IVVTGGAGYIGSHTVVELIYHGYNVIAIDNLCNSSYEAIARI-EFLVRKSVL-FY----NIDLRDEKQLSHIFSSYNVQGVLHFSALKAVGEST 94 
                      79*****************99999888877777777777764.334444333.44....58********************************* PP

                      HSHHHHHHHHHHHHHHHHHHHHHTT-SEEEEEEEG CS
  Polysacc_synt_2  95 enpleaiktNvlgtenvieaaieagvkkvvliStD 129
                      + pl+  ++N++g+ +++++  ++++k++v+ S+ 
       EPX73416.1  95 KIPLDYYDNNIYGSITLLRVMNKHNIKTIVFSSSA 129
                      ******************************99874 PP

>> RmlD_sub_bind  RmlD substrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.0   0.0   2.1e-11   3.3e-08       3     141 ..       7     172 ..       5     184 .. 0.90

  Alignments for each domain:
  == domain 1  score: 33.0 bits;  conditional E-value: 2.1e-11
                    EEEESTTSHHHHHHHHHCTTTSEEEEEE-TT......................T--TTSHHHHHHHHHHH--SEEEE------HHHHHHSHHHHHH CS
  RmlD_sub_bind   3 ilvtGanGqlGseLakqlaeeglevlaltre......................eldltdaeavaellkeakpdvvvnaAAytavDkaEseeeaaya 76 
                    i+vtG+ G +Gs+ + +l  +g++v+a+++                       ++dl+d++++ +++++ + + v +  A +av +  + +   y 
     EPX73416.1   7 IVVTGGAGYIGSHTVVELIYHGYNVIAIDNLcnssyeaiarieflvrksvlfyNIDLRDEKQLSHIFSSYNVQGVLHFSALKAVGESTKIPLDYYD 102
                    89**************************8878999************************************************************* PP

                    HHTHHHHHHHHHHHHCT-EEE.EEEEGGGS-S-.....TTS-B-TTS----SSHHHHHHHHHHHHHHHH-S CS
  RmlD_sub_bind  77 vnaeavealAeaaaavgalLi.hvStDyVFdGe.....kkrpYeeddetsPlnvYGrtKlaGEqavlaagk 141
                     n  ++ +l ++ ++++++ i + S+  V+ G+     +  p  e+ + +P n YG+tK+  E+ +++ +k
     EPX73416.1 103 NNIYGSITLLRVMNKHNIKTIvFSSSATVY-GDatrfeNMIPIPENCPNEPTNPYGKTKYVIENLIKDLQK 172
                    *****************9765055566666.4436776667899*********************998655 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.0   3.7e-08   6.1e-05       3      69 ..       7      74 ..       5      80 .. 0.94

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 3.7e-08
                EEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHT.TSEEEEEE-TTTSHHHHHHHHH CS
   adh_short  3 vlvtGassGIGraiakelakeGakvvvvdrseekleevakelkee.gakalaiqvDvtdreevealve 69
                ++vtG+++ IG  ++ el+  G++v+++d+  +   e+++ ++ + ++++l++++D++d+++++ +++
  EPX73416.1  7 IVVTGGAGYIGSHTVVELIYHGYNVIAIDNLCNSSYEAIARIEFLvRKSVLFYNIDLRDEKQLSHIFS 74
                89*******************************************999**************998775 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0   1.6e-07   0.00026       3     144 ..       7     135 ..       5     139 .. 0.82

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 1.6e-07
                 EEEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHT.T-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE---------TTT- CS
          KR   3 ylitGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaeleal.gaevevvaaDvsdkdavealleeikaeeppikGvihaAgvlrdklleem 100
                  ++tGG+G +G +++  l+ +g + +++   + +++ +    ia++e l   +v ++++D+ d++++++++++++     ++Gv+h   + + +  ++ 
  EPX73416.1   7 IVVTGGAGYIGSHTVVELIYHGYNVIAIDNLC-NSSYE---AIARIEFLvRKSVLFYNIDLRDEKQLSHIFSSYN-----VQGVLHFSALKAVGESTKI 96 
                 579*********************99998887.44444...5555555545799*******************97.....******9998887777777 PP

                 -HHHHHHHHTTTTHHHHHHHHHTTTS--SEEEEEEEHHHHH--T CS
          KR 101 taedleqvlapKvkGawnLhelledesldffvlfSSiagllgsa 144
                   + +++     + G+  L +++++++++ +v fSS a+++g a
  EPX73416.1  97 PLDYYDN----NIYGSITLLRVMNKHNIKTIV-FSSSATVYGDA 135
                 7776655....689**********99999865.77778888876 PP

>> NAD_binding_4  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.0   1.9e-05     0.031      86     193 ..      76     173 ..       9     199 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1.9e-05
                    HH--EEEE--SS-S.STTSSE...EHHHHHHHHHHHHHHHTSSS--.-EEEEEEGGGTTS-TTT--SSS-H......HHH--EEEETTTCCCHHHH CS
  NAD_binding_4  86 eevdviihsaAtvnfdepyke...llrvNveGtrevlelakklkklkvllhvSTayvngeregeveekvyeegekeekldederaklkglpntYeq 178
                     +v+ ++h  A   + e++k     ++ N+ G   +l+  +k + + ++++ S+a+v+g+ + ++ e+          +    ++  ++ +n Y +
     EPX73416.1  76 YNVQGVLHFSALKAVGESTKIpldYYDNNIYGSITLLRVMNKHNIK-TIVFSSSATVYGDAT-RF-EN----------MIPIPENCPNEPTNPYGK 158
                    4677788888888887777764447889*************99888.*************99.66.44..........4557788888999***** PP

                    HHHHHHHHHHHHHHH CS
  NAD_binding_4 179 sKalaEklvrearrr 193
                    +K++ E+l+++ +++
     EPX73416.1 159 TKYVIENLIKDLQKS 173
                    *********998854 PP

>> NAD_binding_10  NAD(P)H-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   6.1e-06    0.0099       1     109 [.      11     138 ..      11     177 .. 0.74

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 6.1e-06
                     TTTSHHHHHHHHHHHHC-T-EEEEE..ETT..HHHCHHHH..CTTTCEEEE--TT-CCHHHHHHTT-SE..E..EES---TCC.........HHH CS
  NAD_binding_10   1 GAtGkvGrllvkellargghevtal..vRn..peklaele..aeeglevvegdvtdvedlaealkgada..V..vsalggggk.........dee 76 
                     G+ G +G++ v el+ + g++v a+    n   e +a++e   ++ +    +d+ d+++l + ++ +++  V  +sal + g+         d++
      EPX73416.1  11 GGAGYIGSHTVVELIYH-GYNVIAIdnLCNssYEAIARIEflVRKSVLFYNIDLRDEKQLSHIFSSYNVqgVlhFSALKAVGEstkipldyyDNN 104
                     999**************.5***99733222333444444433568888999*************9887444767888855555344666665555 PP

                     H..HHHHHHHHHHCT--EEEEEEETTTTSGCGCHH CS
  NAD_binding_10  77 g..aknivdaakeagvkRfvlvsaigvgdevpgef 109
                     +   ++++++++++++k +v+ s++ v+ ++ + f
      EPX73416.1 105 IygSITLLRVMNKHNIKTIVFSSSATVYGDATR-F 138
                     499************************975443.3 PP

>> VirB8  VirB8 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   0.00015      0.25     173     212 ..     319     355 ..     309     356 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00015
                 EEEEEEEEEEEE...E-S---HHHHTT-TT-EEEEEEEEE CS
       VirB8 173 ktkrwtatltfryevkqaptteeellaNPlGfyVtsysws 212
                 k+ +w+at t++  +       ++  +NP+Gf V++y+w 
  EPX73416.1 319 KELNWIATMTVE--Q-ACRDLWKWTTENPFGFRVDNYHWK 355
                 444899999994..2.33346789999************5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (687 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       392  (0.021864); expected 358.6 (0.02)
Passed bias filter:                      306  (0.0170673); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.62u 0.28s 00:00:00.90 Elapsed: 00:00:00.43
# Mc/sec: 4800.18
//
Query:       EPX73417.1  [L=522]
Description: galactokinase Gal1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      1e-19   69.8   0.0    2.6e-19   68.5   0.0    1.7  1  GalKase_gal_bdg  Galactokinase galactose-binding signature
    3.3e-17   62.5   0.4    3.3e-17   62.5   0.4    2.4  4  GHMP_kinases_N   GHMP kinases N terminal domain
    1.3e-12   47.8   0.0    2.7e-12   46.9   0.0    1.5  1  GHMP_kinases_C   GHMP kinases C terminal


Domain annotation for each model (and alignments):
>> GalKase_gal_bdg  Galactokinase galactose-binding signature
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.5   0.0   4.3e-23   2.6e-19       2      48 ..      29      76 ..      28      77 .. 0.95

  Alignments for each domain:
  == domain 1  score: 68.5 bits;  conditional E-value: 4.3e-23
                     HHHHHHS--.-EEEEEEEEEEEE--S-TTTT-EEEEEEEEEEEEEEEE CS
  GalKase_gal_bdg  2 eFqktFgke.pfvasAPGRvnLiGEHtDYngGfVlpmAieqdiyiavs 48
                     +F+++F  +  f+ ++PGRvn+iGEH+DYn ++VlpmA e d+++av+
       EPX73417.1 29 KFKEEFSMDaSFMSRSPGRVNIIGEHIDYNYFSVLPMAMEVDVVAAVR 76
                     7*****99966***********************************97 PP

>> GHMP_kinases_N  GHMP kinases N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.5   0.4   5.5e-21   3.3e-17       2      66 .]     150     217 ..     149     217 .. 0.92
   2 ?   -3.4   0.0         2   1.2e+04      34      50 ..     268     282 ..     261     285 .. 0.66
   3 ?   -3.2   0.1       1.8   1.1e+04      10      18 ..     458     466 ..     457     473 .. 0.86
   4 ?   -2.9   0.0       1.4   8.5e+03      28      49 ..     483     502 ..     477     512 .. 0.57

  Alignments for each domain:
  == domain 1  score: 62.5 bits;  conditional E-value: 5.5e-21
                     EEEEESSHTTSSSCHHHHHHHHHHHHHHHHTTEH.H.HH..HHHHHHHHHHHHHHHHHSHHHHHHHHSS CS
  GHMP_kinases_N   2 ivikseiPvgaGLGSSAAlavalvaAllallgls.l.ee..aklaleaerlaqggngsggDvaasvyGg 66 
                     ++ ++++P+g GL+SSAA++v+ ++A+l+++g+  l +e   k+++++e++++ +n++g+D++as+yG+
      EPX73417.1 150 LTYDGNVPTGGGLSSSAAFCVTSIMAILKANGIGtLsKEdlTKISVVSEHYVG-VNTGGMDQCASIYGE 217
                     7889****************************998762269***********8.*************95 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2
                     EHHHHHHHHHHHHHHHH CS
  GHMP_kinases_N  34 lsleeaklaleaerlaq 50 
                     l++  +++a+++e la 
      EPX73417.1 268 LRV--VEMAVDSEMLAK 282
                     333..899999998875 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 1.8
                     TTSSSCHHH CS
  GHMP_kinases_N  10 vgaGLGSSA 18 
                     +gaG G+SA
      EPX73417.1 458 TGAGWGGSA 466
                     699999998 PP

  == domain 4  score: -2.9 bits;  conditional E-value: 1.4
                     HHHHTTEHHHHHHHHHHHHHHH CS
  GHMP_kinases_N  28 llallglsleeaklaleaerla 49 
                      ++++++ +  ++l++e  ++a
      EPX73417.1 483 KNQYYNKHF--PNLSQEDLEAA 502
                     377886554..56666554444 PP

>> GHMP_kinases_C  GHMP kinases C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.9   0.0   4.5e-16   2.7e-12      10      85 .]     415     488 ..     399     488 .. 0.92

  Alignments for each domain:
  == domain 1  score: 46.9 bits;  conditional E-value: 4.5e-16
  GHMP_kinases_C  10 lellgellnlsqrselkavvgilppeleellealselGalgaklsGaGgGptvfalfkdkdeaeqvaralreefen 85 
                     l ++g+l+n+sqrs    +  +++p+lee++ +  ++Ga+ga+ +GaG+G++ ++l+ + ++  +v++al+++++n
      EPX73417.1 415 LLAFGRLMNDSQRS-ANIYNNSSSPHLEEVCAISVANGAYGARATGAGWGGSAVHLT-TVQRLPRVVSALKNQYYN 488
                     568**********9.446**************************************9.9999999*****999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (522 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       741  (0.0413297); expected 358.6 (0.02)
Passed bias filter:                      550  (0.0306766); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.22s 00:00:00.76 Elapsed: 00:00:00.37
# Mc/sec: 4235.07
//
Query:       EPX73418.1  [L=564]
Description: zinc finger protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.4e-07   29.4  11.0    1.3e-06   28.4  11.0    1.5  1  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain
      0.005   15.9   7.5       0.02   13.9   7.5    2.0  1  Fungal_trans  Fungal specific transcription factor domain


Domain annotation for each model (and alignments):
>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.4  11.0   1.5e-10   1.3e-06       1      35 [.      13      45 ..      13      49 .. 0.92

  Alignments for each domain:
  == domain 1  score: 28.4 bits;  conditional E-value: 1.5e-10
                SS-HHHHHCT---STSSSS-HHHHHCTHHHCCCCT CS
     Zn_clus  1 haCdnCrkkKvKCdakkPaCsnCkklnleCtfyse 35
                +aC  C+kkK+KC++ +P C  C+++ +eC+ y +
  EPX73418.1 13 KACLVCHKKKRKCSGTFP-CFYCERYCYECQ-YAQ 45
                59****************.************.654 PP

>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   7.5   2.2e-06      0.02       2     184 ..     172     347 ..     171     441 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 2.2e-06
  Fungal_trans   2 drffsnfhpqfpilhkpsflpktssenssksayaspllllailalGalfsesetkesnssltsesqefiafplraeilihedfsspssslwilqsLl 98 
                   +++f++++p f +l++  f ++ +++  ++ a  +  ll +++ lG++fs++++  ++ +l +    ++ + l +++++      + +s+  + s+ 
    EPX73418.1 172 SVYFEDVNPIFELLDQTAFEEQVHKQWAEDMAADFGVLLCSVVVLGSFFSHNNSLHNELQLLQ----YAEGLLNKSAFS----INSIPSIGQIVSWI 260
                   79******************9996666677777788888******************888888....77888*******....788888******** PP

  Fungal_trans  99 llelyektssdralherhhgvavrlarslgLhrnpsyvgkks.....lwklweeeaesrrRlwwaaFylDktialklGrppllddsqinlp 184
                   l ++y+ +      +++ ++v +++     L  +++ ++ ++      +k++ + +++  +++  a+ + +++a+ +G +p+ + s++n+ 
    EPX73418.1 261 LRSVYLRAAAHPHNVWLASCVSMQCIEIFCLYHDSNEEE-SNlseyeQQKHSYFSSKI--KIFSIAWAFNRILASEYGTTPI-KLSELNIK 347
                   *****************9999999888888876666655.335787788888888888..*********************7.66666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (564 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       849  (0.0473534); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 4092.22
//
Query:       EPX73419.1  [L=531]
Description: cycloheximide resistance protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-32  113.3  36.8    1.7e-32  112.8  36.8    1.2  1  MFS_1     Major Facilitator Superfamily
     0.0058   15.5  26.0      0.014   14.3  26.0    1.6  1  Sugar_tr  Sugar (and other) transporter


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.8  36.8   1.8e-36   1.7e-32       1     345 [.      97     473 ..      97     484 .. 0.83

  Alignments for each domain:
  == domain 1  score: 112.8 bits;  conditional E-value: 1.8e-36
       MFS_1   1 lllaaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslwlllvlrvlqGlga 99 
                 ++++++ +++a+s++++ +p  + +++++s  +++l + +y +g++ +slp+++ls  +Gr  v++++ll+f +  + + +a+++w+l +lr +qG+++
  EPX73419.1  97 ICIVTMSVTFASSVFSTGVP-EVVKTFHASTPVASLGTCTYLVGFSMGSLPFAPLSGIYGRFIVYFVTLLIFTVLQVGGGVAQNVWTLPILRYFQGFFG 194
                 579999**************.899************9999***********************************7777777***************** PP

       MFS_1 100 galfpagaaliadwfpkeergraigllsagfslGailgpllgglla.sslgWravfyilaivsllafvlfllllpeepperkrkspkeee......... 188
                 ++ +++++  ++d++++ e ++a+ +l a+  lG+++gp++g +++ s+lgWr++f+i  i+s  +++l+ + lpe++ +   + +++ +         
  EPX73419.1 195 STPLANCGGTASDIYSPLEYTFAVPILCAFPFLGPVVGPIIGDFISqSYLGWRWTFWITMIFSGAVVLLITFALPETHADTILFYKARYLrrvtgnplr 293
                 *********************************************************************999999999999999999998999999999 PP

       MFS_1 189 ......kgtgpaplvp....awkallkdpvlwillialllfffgfsglltllplylqevlgls....glllaglllallalvgailallagrlsdr... 270
                       +++ +++++     a ++l + p +  +++  +++ f++ ++ + +  ++ +++g++    gl  +g  ++++ l++  + +l+ ++  r   
  EPX73419.1 294 ytknekQRDPKSAIIRaftnAASLLISEPIVV-CFTLYVTILFAIVYINFESYPIVYSQYGFNqgeqGLSFIG--IGVGILLATSFTPLVYYYYSRifk 389
                 99877533333333335555777777777443.444444444444444444444469*******999999999..99999999999********99888 PP

       MFS_1 271 .....lgrrrrlllallllllaalglallavt.....ssavllll..vlvliGfglgfvfpsllalasdlappeeagtasglfntag 345
                      + ++ rl+  +++++l+ ++l++la+t      + ++     +++l+G  l ++f+ ++++  d +  + a +a++++++++
  EPX73419.1 390 rengnVAPEHRLYPLFVGCFLLPISLFWLAWTcypnkIHWIV--PiiSSILFGASLLLIFSVVFTYFIDTYQ-SLAPSALAAATLVR 473
                 88888777************************8864433333..3447777888777778888888877773.56666666665554 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3  26.0   1.6e-06     0.014      18     437 ..      99     515 ..      86     521 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.6e-06
                 CGGGTHHHHHHHHTSTT--SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHH CS
    Sugar_tr  18 vigafltllkfaknfglsksksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvGigv 116
                 ++   +t+ + ++  g+ + +++  +s+   +l ++ +lvG  +Gsl + +l+ ++GR  ++ ++ ++f + +v  ++a+   +v+ l + R + G++ 
  EPX73419.1  99 IVTMSVTFASSVFSTGVPEVVKTFHASTPVASLGTCTYLVGFSMGSLPFAPLSGIYGRFIVYFVTLLIFTVLQVGGGVAQ---NVWTLPILRYFQGFFG 194
                 555566777777888888888888889*****************************************************...**************99 PP

                 HHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHHHHHHHHHHG.GGS---HHHHHHTT-HH.HHHHHHHH CS
    Sugar_tr 117 GlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglglnktsnadgwrillglqlvpallllill.lflPESPrylvekgkee.eakevlak 213
                  +  + +  ++s i  +    + v +   +  +G +v+ i+g +++++    gwr++++++++++ ++++l+ + lPE+     + +       + l++
  EPX73419.1 195 STPLANCGGTASDIYSPLEYTFAVPILCAFPFLGPVVGPIIGDFISQSYL--GWRWTFWITMIFSGAVVLLItFALPET-----HADTILfYKARYLRR 286
                 999999999999986666666667777777889*********99988777..8************99988874679***.....666666667788999 PP

                 HHHCHHHHHHHHHHHHHHHHHHH.....HTTHHHHSH...HHHHHHHHHHHHHHTTHHHHHHHT.TTHHHHSS-THH.....HHHHHHHHHHHHHHHHH CS
    Sugar_tr 214 lrgeedadrelaeekdsleaeqeeekaswkellssktvrqrlligvvlqifqqltGinaimyys.ptifenlglsks.....llvtiivgvvnfvatfv 306
                 + g++++  + ++  d   a  ++ ++  + l+s+     ++++++ l  ++ l  i +i + s p ++++ g+++      +++ ++ + + + +t  
  EPX73419.1 287 VTGNPLRYTKNEKQRDPKSAIIRAFTNAASLLISE-----PIVVCFTLY-VTILFAIVYINFESyPIVYSQYGFNQGeqglsFIGIGVGILLATSFTPL 379
                 99999999999999999999966544555555555.....555555544.4444444444443327778888888888888566666666677889999 PP

                 HHHHHHHS-SHHHHHHH........HHHHHHHHHHHH...HHHHTTSS...CHHHHHHHHHHHHHHHTTTTHHHHHHHHHHSHTTTHHHHHHHHHHHHH CS
    Sugar_tr 307 aiflvdrfGRRtllllG........aagmaicfvilg.ivalllvakskaasivaivfialfialfalgwgpvpwvlvsElfpqsvRskalaiavavnw 396
                 + +  +r+ +R+   +         ++g++++ + l   +   +++k     iv i+  +lf a   l +   ++ +  ++  qs+ ++ala a+ v  
  EPX73419.1 380 VYYYYSRIFKRENGNVApehrlyplFVGCFLLPISLFwLAWTCYPNK--IHWIVPIISSILFGASLLLIFSV-VFTYFIDT-YQSLAPSALAAATLVRY 474
                 99999999999888888899977776666666666665445555555..45566666666666665544443.33444554.47899999999999999 PP

                 HHHHHHHHHHHHHHCHHHT-HHHHHHHHHHHHHHHHHHHHS CS
    Sugar_tr 397 lanflisllfpiiteaigggyvflvfaglavlfiifvfffv 437
                   +  ++++   +  ++g+ y   v a++  ++i + f+f+
  EPX73419.1 475 STSGGMTMVARPMYHNLGNHYATTVLACISSAMIPIPFVFY 515
                 99999999999999999999999999999999999888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (531 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       974  (0.0543254); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.30s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 3756.88
//
Query:       EPX73420.1  [L=536]
Description: caffeine resistance protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-32  112.8  33.1    1.7e-32  112.8  33.1    1.7  2  MFS_1     Major Facilitator Superfamily
    2.9e-05   22.7   3.5    5.1e-05   21.9   3.5    1.4  1  TRI12     Fungal trichothecene efflux pump (TRI12)
  ------ inclusion threshold ------
       0.12   11.9   0.6        0.2   11.2   0.6    1.4  1  DUF2140   Uncharacterized protein conserved in bacteria (DUF2


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.8  33.1   2.8e-36   1.7e-32       1     353 []      93     482 ..      93     482 .. 0.80
   2 ?   -0.2   0.3      0.06   3.6e+02      17      50 ..     482     515 ..     477     520 .. 0.55

  Alignments for each domain:
  == domain 1  score: 112.8 bits;  conditional E-value: 2.8e-36
       MFS_1   1 lllaaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdr..fGrrrvlllglllfalglllll.fasslwlllvlrvlqG 96 
                 ++l+++ +++++si+++ l   +++d ++ + ++ l l+l+ +g++v+ +++++l++   +Gr +v+l++l++++    +++ ++s++ +ll lr+l+G
  EPX73420.1  93 VCLLTIATYMGASIITSGLD-EIKNDMHVGHVTAMLGLSLFIVGYSVGPMFFAPLTEIpqVGRQKVYLITLVIYICL-QIPTaLCSGIGALLPLRFLAG 189
                 57899***************.9***********************************6559****************.7777456************** PP

       MFS_1  97 lgagalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpeepperkrkspkeee....... 188
                 ++++ +++ag+a i+d++  +     +  +s+++  G++lgpl+g++++ + +Wr+ f++l  +s+ +f+lf++++pe+  ++   ++++++       
  EPX73420.1 190 FFGSPALAAGGATITDMWDSKYAQYFVTSWSLCAFSGPALGPLFGAIMVVAKSWRWQFWFLMMLSAAVFILFFVFVPETSASNILYRKTKRLrkttnns 288
                 ********************9999999********************************************8888888888888888888877666666 PP

       MFS_1 189 .......kgtgpaplvp........awkallkdpvlw.....illialllfffgfsglltllpl...ylqevlglsglllaglllallalvgail..al 262
                                 +        ++++++ +p ++     i+l   l+ ++++s+++ ++        e ++++ l+++g  l  l++++  l   +
  EPX73420.1 289 llqtpeeL--------QysqlkitkLLTEIFLRPIILsirepIVLSLNLYLGLVYSLMYLWFEAfpiVYLELYHFT-LIENG--LTYLGILIGTLlpTP 376
                 66555542........04444445578889999988566777555555555567777555554433345*******.66666..333333333333533 PP

       MFS_1 263 lagrlsdr............lgrrrrlllallllllaalglallavt....ssavllllvlvliGfglgfv.fpsllalasdlappeeagtasglfnta 344
                 +  +++++            + ++  l +++++++++ ++l+++++t     +++ +l++ +l+  g++++ ++++++las++   ++ +++++ +n++
  EPX73420.1 377 FYFYYLHKvlipkltnnsgrIVPEEVLRVSFPAAFFFPVCLFWFGWTaqrsINYFSSLVSTLLYAAGSFLIfQTCYQYLASSYP--NYIASVYAGNNLC 473
                 33333344455556555788888************************8887777777778888999665551666666666666..************* PP

       MFS_1 345 gslggalgp 353
                 +sl++a +p
  EPX73420.1 474 RSLMAASFP 482
                 ***998766 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.06
       MFS_1  17 palplalaedlgispseigllltlyalgaavasl 50 
                 p++  a+ ++ g s + +g+ +t+ ++ ++++ +
  EPX73420.1 482 PLFARAMFKNTGPSYAPVGWGCTILGIITCIMFP 515
                 4444455566666666666666666665555444 PP

>> TRI12  Fungal trichothecene efflux pump (TRI12)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   3.5   8.5e-09   5.1e-05      49     229 ..      93     277 ..      58     288 .. 0.80

  Alignments for each domain:
  == domain 1  score: 21.9 bits;  conditional E-value: 8.5e-09
       TRI12  49 fslnvvatyfvlqasasalpnilqdvgqsensslfs.tlwttgqavsilvmgrltd..rfgrrpfvilthilglvgaivgctatkfntllaamtllgva 144
                 + l  +aty+     +s l +i +d+     ++++  +l+ +g +v  + +  lt+  ++gr+ + ++t ++ +   i  + ++ + +ll    l g  
  EPX73420.1  93 VCLLTIATYMGASIITSGLDEIKNDMHVGHVTAMLGlSLFIVGYSVGPMFFAPLTEipQVGRQKVYLITLVIYICLQIPTALCSGIGALLPLRFLAGFF 191
                 567789*******************9988877766438*****************85579***************9**999999999**9999999999 PP

       TRI12 145 agpagas.plfvgelmsnktkflgllivsipvvvtsg..lspylgqrlaiqgswrwifyiyiitsaiavllivvwyyppsfaqlhgkk 229
                   pa a+    + ++   k  +   ++ s    + sg  l+p +g  + +  swrw f+  +++sa   +l  v+    s +++  +k
  EPX73420.1 192 GSPALAAgGATITDMWDSK--YAQYFVTSWSLCAFSGpaLGPLFGAIMVVAKSWRWQFWFLMMLSAAVFILFFVFVPETSASNILYRK 277
                 9999665156677776655..5555555555555554339*******************99999998888887776666665554444 PP

>> DUF2140  Uncharacterized protein conserved in bacteria (DUF2140)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.6   3.4e-05       0.2       2      35 ..     242     276 ..     241     302 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 3.4e-05
     DUF2140   2 kWkwaFliLlalllllvavvlvrvfapseeste.k 35 
                  W+w F+ L+ l ++++++++v+v ++s ++   +
  EPX73420.1 242 SWRWQFWFLMMLSAAVFILFFVFVPETSASNILyR 276
                 6********************99999888875532 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (536 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1002  (0.0558871); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.61u 0.25s 00:00:00.86 Elapsed: 00:00:00.41
# Mc/sec: 3925.44
//
Query:       EPX73421.1  [L=104]
Description: hypothetical protein SOCG_02645 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.2e-05   23.7   0.7    4.6e-05   23.6   0.7    1.0  1  DUF3430   Protein of unknown function (DUF3430)
    0.00052   20.2   1.3       0.43   10.9   0.0    2.2  2  MiAMP1    MiAMP1
  ------ inclusion threshold ------
      0.096   12.9   0.4       0.14   12.4   0.4    1.3  1  DUF3586   Protein of unknown function (DUF3586)


Domain annotation for each model (and alignments):
>> DUF3430  Protein of unknown function (DUF3430)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   0.7   7.7e-09   4.6e-05       1     102 [.       1      91 [.       1     101 [. 0.78

  Alignments for each domain:
  == domain 1  score: 23.6 bits;  conditional E-value: 7.7e-09
     DUF3430   1 MKllfslilllllllnflinsqyinfipyqsekCsgegsssgigysieideCitndnqnnyvfsvftdssdgeiiktnyyedqnCegkpistftfeigs 99 
                 MK++   +++l+ ++ +++    + ++ +++  C+g++s     y+i+++ C  +     +v s+ +  ++g ++ + y   ++C+g+pi t++++ + 
  EPX73421.1   1 MKFFSVALFTLMAFVGMAFGYPMLAMQAFDDIHCKGSKS-----YAISVNDCQKFR----DVSSIKSFAERGVCTAYVYTS-DDCSGSPILTQNIQ-NG 88 
                 89954444444444444477777************6555.....6677999*****....888999999999999999999.************99.55 PP

     DUF3430 100 Cvs 102
                 C  
  EPX73421.1  89 CND 91 
                 655 PP

>> MiAMP1  MiAMP1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   0.0   7.1e-05      0.43      28      68 ..      13      51 ..       8      60 .. 0.87
   2 !    8.7   0.3   0.00035       2.1      40      68 ..      66      93 ..      57     104 .] 0.74

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 7.1e-05
      MiAMP1 28 lhgGyefvyegqtaalYnqpdCkgvastvlessvqaCgdfg 68
                + +G  f y   +++++ + +Ckg+ s  ++  v++C++f+
  EPX73421.1 13 AFVGMAFGYPMLAMQAFDDIHCKGSKSYAIS--VNDCQKFR 51
                568999*********************9999..78***997 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00035
      MiAMP1 40 taalYnqpdCkgvastvlessvqaCgdfg 68
                ta +Y+  dC g++  + + +++ C+d+ 
  EPX73421.1 66 TAYVYTSDDCSGSPILTQN-IQNGCNDLD 93
                8999999999999987755.657799864 PP

>> DUF3586  Protein of unknown function (DUF3586)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.4   2.4e-05      0.14      34      77 ..      34      77 ..      22      78 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 2.4e-05
     DUF3586 34 rkgCkktvlptneClknggggSvvatCgaeevleliyssssCsG 77
                 kg k+  +  n C k + + S+         +  +y+s +CsG
  EPX73421.1 34 CKGSKSYAISVNDCQKFRDVSSIKSFAERGVCTAYVYTSDDCSG 77
                378899999**********************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       627  (0.0349713); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.35u 0.24s 00:00:00.59 Elapsed: 00:00:00.36
# Mc/sec: 854.81
//
Query:       EPX73422.1  [L=174]
Description: WW domain binding protein-2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    0.00085   19.5   0.0     0.0014   18.8   0.0    1.4  1  Vps36_ESCRT-II  Vacuolar protein sorting protein 36 Vps36
  ------ inclusion threshold ------
      0.038   13.9   0.0      0.049   13.5   0.0    1.3  1  GRAM            GRAM domain


Domain annotation for each model (and alignments):
>> Vps36_ESCRT-II  Vacuolar protein sorting protein 36 Vps36
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   1.5e-07    0.0014       8      67 ..      16      80 ..      11      93 .. 0.65

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 1.5e-07
  Vps36_ESCRT-II  8 pvLeenEsiilvqdnVglYegde....KilnrqnGrlyLTthriiyvdsadpkke.slslelklv 67
                    p L enE i ++ ++++l    +    K  +  +G +yLT++riiy+  +++++  + ++++ ++
      EPX73422.1 16 PFLLENECIFARYEGIALSVMCNppssKSWASTQGCMYLTNQRIIYITGEENNTFsDFQVPICNF 80
                    555566655555555555433222222999999**************877776641456666555 PP

>> GRAM  GRAM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   5.5e-06     0.049       8      60 ..      14      78 ..       9     124 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 5.5e-06
                --..--TT--EEE.........EEEEEEESS.SEEEEEEEEESSEEEEEE-STT---E.EEEEGG CS
        GRAM  8 ke..llpeEklla.........tykCyllrdggpvqGrlyltnyrlcFrskplgsskk.vvlpla 60
                ke  ll++E+++a          ++ + +++    qG +yltn+r+++   + +  ++ +++p+ 
  EPX73422.1 14 KEpfLLENECIFAryegialsvMCNPPSSKSWASTQGCMYLTNQRIIYITGEENNTFSdFQVPIC 78
                555688999999977666553333334444449**************977776666666777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       278  (0.0155056); expected 358.6 (0.02)
Passed bias filter:                      260  (0.0145016); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 1311.19
//
Query:       EPX73423.1  [L=402]
Description: F-box protein Pof13 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.022   14.6   0.8      0.079   12.9   0.8    1.9  1  F-box     F-box domain


Domain annotation for each model (and alignments):
>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.8   4.4e-06     0.079       9      42 ..      45      78 ..      43      83 .. 0.93

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 4.4e-06
                HHHHHHHHTS-HHHHHHHCTT-HHHHHHHTTHHH CS
       F-box  9 evlrhILerLplsdllalrrVSkgwrilidsdrl 42
                +++  I  +L+  dl +l+ V ++++ ++  +rl
  EPX73423.1 45 DIWSLIVNYLDIFDLYRLMHVNRHFYHWLQICRL 78
                8999*************************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (402 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       642  (0.0358079); expected 358.6 (0.02)
Passed bias filter:                      407  (0.0227007); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2915.76
//
Query:       EPX73424.1  [L=676]
Description: TTK protein kinase Mph1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.4e-55  186.3   0.0    9.3e-55  185.8   0.0    1.2  1  Pkinase         Protein kinase domain
      4e-25   88.6   0.1    1.3e-23   83.6   0.1    2.4  1  Pkinase_Tyr     Protein tyrosine kinase
    0.00092   18.9   0.1     0.0018   17.9   0.1    1.5  1  RIO1            RIO1 family
     0.0015   17.9   0.0     0.0024   17.3   0.0    1.3  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
      0.003   16.4   0.2     0.0065   15.3   0.2    1.5  1  Pkinase_fungal  Fungal protein kinase
     0.0066   15.8   0.0      0.012   15.0   0.0    1.4  1  Kinase-like     Kinase-like
       0.01   15.5   0.0       0.68    9.5   0.0    2.4  2  FTA2            Kinetochore Sim4 complex subunit FTA2
  ------ inclusion threshold ------
      0.059   13.3   0.0        1.4    8.8   0.0    2.2  2  APH             Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  185.8   0.0   4.2e-58   9.3e-55       3     264 .]     316     603 ..     314     603 .. 0.86

  Alignments for each domain:
  == domain 1  score: 185.8 bits;  conditional E-value: 4.2e-58
                 EEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS.CTTB--EEEEEEESS..EEEEEEE--TTEBHHHHHH..HHSS-- CS
     Pkinase   3 kleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklk.hpnivrlyevfeekd..elylvleyveggeladlle..rkgsls 96 
                 kl  +G+G++++V+++++ e+g+ +A+K+++  +a+ ++ + + +Ei++l+kl+  ++iv+ly +  +++  +l +v+ey e++ la+ll+  +++ ++
  EPX73424.1 316 KLGIVGKGGSSTVFRIYSPENGRLYALKEVSFLQADFSTVQGYKNEIALLRKLSgNDRIVKLYAAEANNSigQLNMVMEYGETD-LAKLLNkyANKPIN 413
                 56789****************************9999999**************9********998885433899*******76.999999888889** PP

                 HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS...BCTTTSCGGGS-HHHH...........TTSCBSHHHHHH CS
     Pkinase  97 eeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk...ltsfvgtseYlAPEvl...........keneyskkvDvW 181
                  + ++ +++q+l++++ +H+++i+H DlKp+N+L+  +g lK++DFG+ak + ++++    +s vgt +Y+APE l           k  + ++++DvW
  EPX73424.1 414 LNFIRMYWEQMLQAVQIVHEQNIVHSDLKPANFLLV-EGSLKLIDFGIAKAIGNDTTnihRDSHVGTINYMAPEALtdmnantdlgvKLVKLGRPSDVW 511
                 ************************************.*****************9999999***************9887766655444788******* PP

                 HHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHH..HHHCT.......SHH...HHHTTS.......-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 182 slGvilyelltgkppfsgekgkekvekeldqleki..lkilg.......etkeklpeasei.......seeakdllkkllkkdpkkRltaeellqhpyl 264
                 slG+ily++++g+ pf++ k  + ++++ d+ ++i   +i          +++                +++ d++k++l++d+kkRlt+ ell hp+l
  EPX73424.1 512 SLGCILYQMVYGRAPFAHLKMIQAIAAIPDDRHQIqfPEIAVpptanheASHN-------ShphgvvvGPDLMDVMKRCLQRDQKKRLTIPELLMHPFL 603
                 *****************888877777776664443103444455333222222.......13466677*****************************97 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.6   0.1   5.9e-27   1.3e-23      39     255 ..     349     597 ..     317     600 .. 0.82

  Alignments for each domain:
  == domain 1  score: 83.6 bits;  conditional E-value: 5.9e-27
                  TSSHHHHHHHHHHHHHHHTS.-BTTB--EEEEEE..SSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGG CS
  Pkinase_Tyr  39 eateeekeelleeakimkkl.khpnivkllgvct..keepllivteyvkgGdLlkfLrkkekekltlkdllsfalqvAkGmeyLeskklvHrdlaarN 133
                  +a+ ++ +   +e+++++kl  +++ivkl+++    + ++l +v+ey +  dL k L+k ++++++l+ +  +  q+ ++++ ++++++vH dl   N
   EPX73424.1 349 QADFSTVQGYKNEIALLRKLsGNDRIVKLYAAEAnnSIGQLNMVMEYGE-TDLAKLLNKYANKPINLNFIRMYWEQMLQAVQIVHEQNIVHSDLKPAN 445
                  555566788899********999*********995445679******76.59********9************************************* PP

                  EEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE...........EEHHHHHHHHHHHHHHHHTTSSGT............... CS
  Pkinase_Tyr 134 vLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk...........ftsksDvWsfGvllwEiftlgesp............... 205
                   Ll  +   k+ DfG+a++i +d +  +++++   +++mapE+l++++           +   sDvWs G +l+ ++  g+ p               
   EPX73424.1 446 FLLV-EGSLKLIDFGIAKAIGNDTTNIHRDSHVGTINYMAPEALTDMNantdlgvklvkLGRPSDVWSLGCILYQMVY-GRAPfahlkmiqaiaaipd 541
                  ***9.6789*************************************99999999999888999************998.****666666666666666 PP

                  ......TTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHH CS
  Pkinase_Tyr 206 ......ypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfsel 255
                        +p++    ++++  +++  ++   + ++l+++mk+c+++d+++R t+ el
   EPX73424.1 542 drhqiqFPEIAVPPTANHEASHNSHPHGVVVGPDLMDVMKRCLQRDQKKRLTIPEL 597
                  66655555555555555555666666666667788888888888888888887766 PP

>> RIO1  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.1   8.1e-07    0.0018      83     150 ..     391     459 ..     338     472 .. 0.80

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 8.1e-07
                 EEEE--EETTEEGGBHHHCG.-..HHHHHHHHHHHHHHHHHHHHTSTEEESS-STTSEEEETTEEEE--GT CS
        RIO1  83 lvmefigedgvaapklkdve.e..eeeaeelyeevleemrklykeaglvHaDLSeyNvlvdedkvviIDvs 150
                 +vme+ +     a+ l+++  +  + +  ++y+e + +  ++++e+++vH DL   N l+ e+ + +ID++
  EPX73424.1 391 MVMEYGE--TDLAKLLNKYAnKpiNLNFIRMYWEQMLQAVQIVHEQNIVHSDLKPANFLLVEGSLKLIDFG 459
                 5677766..44444555555334455555677766666888889*************************97 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   1.1e-06    0.0024     102     167 ..     397     459 ..     355     474 .. 0.88

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 1.1e-06
         Kdo 102 aqdLedllakwae..laeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDld 167
                   dL++ll+k+a+  ++ +  r+ +++  ++++  h+ ++ H dl + n+ll ++      + liD+ 
  EPX73424.1 397 ETDLAKLLNKYANkpINLNFIRMYWEQMLQAVQIVHEQNIVHSDLKPANFLLVEGS-----LKLIDFG 459
                 579999999999988888999*******************************9997.....9999996 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.2   2.9e-06    0.0065     318     387 ..     427     489 ..     402     497 .. 0.90

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 2.9e-06
  Pkinase_fungal 318 ghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlk 387
                     + +  + +++i+H D    N l++      e +  LiD+ +ak +++d+++ ++  ++GT+++ma e l 
      EPX73424.1 427 AVQIVH-EQNIVHSDLKPANFLLV------EGSLKLIDFGIAKAIGNDTTNIHRDSHVGTINYMAPEALT 489
                     555666.99***************......78899************9999999***********99887 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   5.3e-06     0.012     125     251 ..     387     528 ..     351     552 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 5.3e-06
  Kinase-like 125 eilnkvlqkrset.hkkletiarlllTlqlirl........aanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvl....seve.kgfa 208
                  + ln v++  ++  +k l++ a + + l+ ir+        ++  +++ +vh ++++ n+ll  +g l+l +f+     g+        s+v    + 
   EPX73424.1 387 GQLNMVMEYGETDlAKLLNKYANKPINLNFIRMyweqmlqaVQIVHEQNIVHSDLKPANFLLV-EGSLKLIDFGIAKAIGNDTTNihrdSHVGtINYM 483
                  555555555555555555666666666666665331111115555666677888999999986.69*******8766666554411114555575677 PP

  Kinase-like 209 PpEllgsrgg...ytrknktkmthkldaWqlGlviyriwclklPlt 251
                   pE l   +     +  + +k   + d+W lG   y +    +P+ 
   EPX73424.1 484 APEALTDMNAntdLGV-KLVKLGRPSDVWSLGCILYQMVYGRAPFA 528
                  7787776555333444.678899999************99999986 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0      0.02        44      26      62 ..     314     354 ..     247     383 .. 0.75
   2 !    9.5   0.0   0.00031      0.68     174     213 ..     417     460 ..     391     462 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.02
        FTA2  26 f..leyLgkglhsiVlkvki..rgkeYALKlFrfleaeele 62 
                 f  l ++gkg +s V+++    +g+ YALK   fl+a+   
  EPX73424.1 314 FikLGIVGKGGSSTVFRIYSpeNGRLYALKEVSFLQADFST 354
                 2335667***********8633778*****87777665544 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00031
        FTA2 174 evsqlpkllrdlkklhklgIvvrDlkeenyi..dg..kLvDlsa 213
                 +  + +++l+ ++++h++ Iv+ Dlk+ n++  +g  kL+D++ 
  EPX73424.1 417 IRMYWEQMLQAVQIVHEQNIVHSDLKPANFLlvEGslKLIDFGI 460
                 5567789**********************975566335788875 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0     0.076   1.7e+02       7      77 ..     322     396 ..     319     410 .. 0.75
   2 ?    8.8   0.0   0.00061       1.4     153     197 ..     421     462 ..     401     464 .. 0.78

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.076
                 -.SSCEEEEEEETT.-.-EEEEEE-TT....S-HHHHHHHHHHHHHHHHTT-B--B-CTTBS-EEETTEEEEEEE-- CS
         APH   7 ggasnrtylvttpa.g.ryvlrrnppa....raaeeirrevallrlLakagvpvPevlagdtddeeigllfalieyv 77 
                  g s+ ++++ +p+ g  y+l+ ++       + +   +e allr L++++  + +++a  + ++ ig l  ++ey 
  EPX73424.1 322 KGGSSTVFRIYSPEnGrLYALKEVSFLqadfSTVQGYKNEIALLRKLSGNDR-IVKLYA-AEANNSIGQLNMVMEYG 396
                 5566668888888875477777644433235567777899999999999977.889999.7999999999*9*9994 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00061
                 HHHHHHH--SSS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-E CS
         APH 153 laalaallpgelptvllHgDlhpgNllvdpddgrvtGviDfedag 197
                 ++++++ ++   ++ ++H Dl+p N+l+   +g +  +iDf+ a+
  EPX73424.1 421 WEQMLQAVQIVHEQNIVHSDLKPANFLLV--EGSL-KLIDFGIAK 462
                 6666666666677889*************..4444.49***9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (676 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       636  (0.0354733); expected 358.6 (0.02)
Passed bias filter:                      421  (0.0234815); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.62u 0.27s 00:00:00.89 Elapsed: 00:00:00.43
# Mc/sec: 4737.96
//
Query:       EPX73425.1  [L=122]
Description: sulfiredoxin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-12   47.1   0.0    2.5e-12   46.9   0.0    1.1  1  ParBc     ParB-like nuclease domain


Domain annotation for each model (and alignments):
>> ParBc  ParB-like nuclease domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.9   0.0   1.4e-16   2.5e-12       3      89 ..      15     118 ..      13     119 .. 0.93

  Alignments for each domain:
  == domain 1  score: 46.9 bits;  conditional E-value: 1.4e-16
       ParBc   3 vplseirpnplqprkdspekieelvasIkk...............kGllqPiivrktr...qgryeiiaGerRlrAakrlglkevpvivleid.deeam 82 
                 ++ sei  +p  p++d  +k++ +++++ +               +G+l+P++v+  +   +++y +++G++RlrA ++ g+++v++ + +++    ++
  EPX73425.1  15 LDMSEII-RPIPPVLD-FDKVNSMKDTMSGsapppscnfnpgdlgQGELPPVDVLTFKksgKTYYFAFGGCHRLRAHDESGKQKVRCKLVNCSpNTLRL 111
                 5778888.99999999.**************************************99999*******************************99888888 PP

       ParBc  83 alslien 89 
                 +l+   n
  EPX73425.1 112 YLGATAN 118
                 8876655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       342  (0.0190752); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.32s 00:00:00.89 Elapsed: 00:00:00.55
# Mc/sec: 663.44
//
Query:       EPX73426.1  [L=356]
Description: DUF1776 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.7e-54  184.1   0.2    2.6e-49  168.2   0.1    2.1  2  DUF1776       Fungal family of unknown function (DUF1776)
     0.0067   16.0   0.0     0.0095   15.5   0.0    1.1  1  adh_short_C2  Enoyl-(Acyl carrier protein) reductase


Domain annotation for each model (and alignments):
>> DUF1776  Fungal family of unknown function (DUF1776)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  168.2   0.1     3e-53   2.6e-49       2     208 ..      92     280 ..      91     291 .. 0.96
   2 !   14.6   0.0   1.8e-06     0.016     252     296 .]     292     336 ..     280     336 .. 0.91

  Alignments for each domain:
  == domain 1  score: 168.2 bits;  conditional E-value: 3e-53
     DUF1776   2 rkdvvlvlGsptePltRsialDLerrGFiVfvtvesaeeeklvesedredIrplsvdddpssieasleefaqslesphvalpgakphvlrLkgvilvPs 100
                 +++vv++  s+++ l++ +a+DL+rrGFiV+v+v++a+e+++v+ ++r++I++l+v++     ++++e+f++s++++    +g+ +++lrL+g++lvP+
  EPX73426.1  92 KTQVVVL--SAWNSLASIVAHDLDRRGFIVVVLVRDASEAATVSLQQRPYIQSLIVTQ-----NEAVERFLSSFSNQ----KGPTEYALRLRGLVLVPT 179
                 799****..************************************************9.....9************9....9***************** PP

     DUF1776 101 lsyptgpietiplsswaselnerllspiltlqallplltsrakqkakiivvnpsissslnlpfhapEalvssalsalfevLkrelrphnidvtqikLGn 199
                  +  ++pie+i++++w  +++ +l+++++++++l+p l+    qk++ii ++++i+s++++p++a+++++ss++++++++Lkre +   + v++ikLGn
  EPX73426.1 180 GDSLYTPIENISKDAWFHAFQ-QLSESFANVSRLIPVLKD---QKSRIIGLSHGILSAYEPPNYAIPSILSSSIETFLHTLKRESG---LRVVCIKLGN 271
                 *********************.*****************8...*******************************************...********** PP

     DUF1776 200 ldlangsqs 208
                 l++ n  +s
  EPX73426.1 272 LSFLNYDHS 280
                 ***984444 PP

  == domain 2  score: 14.6 bits;  conditional E-value: 1.8e-06
     DUF1776 252 sslreLhnalfdllegsskkrvvyvGkgarlyslvgkllpeglve 296
                 ++ r+++n++fd l   ++ + ++vG ++++   v+++lp+++++
  EPX73426.1 292 CTERKVLNKIFDCLLDFWSTPNRHVGSRTFFLIHVSRFLPTCVLD 336
                 789***************************************985 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   1.1e-06    0.0095       4     158 ..     102     259 ..      99     275 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.1e-06
                   TSHHHHHHHHHHHTT-EEEEEESSGGHHHHHHHHHHHTTSEEEE--TTSHHHHHHHHHHHHHHHSSEEEEEE-----EG.....CSS-GGGH-HHHH CS
  adh_short_C2   4 sgIGraiAkalaeeGaevvltdlneeakkrveelaeelgaevlecDVtdeeqvealveevvekfgklDilvnnagiapk.....lkgpfletsreef 95 
                   ++++  +A+ l ++G  vv+  ++ ++   ++++  +    +  + Vt++e+ve++ +   ++ g   +++   g +       l +p++++s++ +
    EPX73426.1 102 NSLASIVAHDLDRRGFIVVVLVRDASE---AATVSLQQRPYIQSLIVTQNEAVERFLSSFSNQKGPTEYALRLRGLVLVptgdsLYTPIENISKDAW 195
                   8999****************9999998...3333333344579999*****************************987777899************* PP

                   HHHHHHHTHHHHHHHHHHHHHCTSC.CEEEEEEEGGGTSB.STTTTHHHHHHHHHHHHHHHHHHH CS
  adh_short_C2  96 draldvnlyslfllakaalplmkeg.gsivnlssvgaerv.vpnynaygaaKaalealtrylAve 158
                    +a++    s++++++ + p++k++ ++i+ ls    + +  pny++ ++   ++e + ++l +e
    EPX73426.1 196 FHAFQQLSESFANVSRLI-PVLKDQkSRIIGLSHGILSAYePPNYAIPSILSSSIETFLHTLKRE 259
                   *************99976.655555499**99875444442566666666666666666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       358  (0.0199677); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.35s 00:00:00.98 Elapsed: 00:00:00.54
# Mc/sec: 1973.64
//
Query:       EPX73427.1  [L=835]
Description: adenosine deaminase Ada1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   1.6e-127  425.4   0.0   2.1e-127  425.0   0.0    1.2  1  A_deaminase  Adenosine/AMP deaminase
  ------ inclusion threshold ------
       0.14   12.4   0.0        0.3   11.3   0.0    1.5  1  Toprim       Toprim domain


Domain annotation for each model (and alignments):
>> A_deaminase  Adenosine/AMP deaminase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  425.0   0.0  2.4e-131  2.1e-127       1     327 [.     317     722 ..     317     723 .. 1.00

  Alignments for each domain:
  == domain 1  score: 425.0 bits;  conditional E-value: 2.4e-131
                  TS-EEEEEEECCCSS-HHHHHHHHHHHCHT..SS-SCCCCCCCCHCHCCHHHHCCHCCCHHCCCHHHT.............................. CS
  A_deaminase   1 nlpKvdlHvHldgclnpktllrlakkkgikeldekvveedeklltlqekfesLkeflydlsvdvlvlh.............................. 68 
                  n++Kvd+HvH+++ +n+k+llr++k k++k+++ekv+++d+k ltlqe+f+sLk+++ydls+d+l++h                              
   EPX73427.1 317 NVRKVDTHVHHSALANQKHLLRFIKAKLRKSPNEKVIWRDGKFLTLQEVFDSLKLTSYDLSIDTLDMHahadtfhrfdkfnlkynpigesrlrtiflk 414
                  89************************************************************************************************ PP

                  .............................................................CCCCCCHHHHHHCCCCCHCTTCCCCCCCCSHHHHHHH CS
  A_deaminase  69 .............................................................wlievvrllavekakdlakdfvkylevifsPlfeata 105
                                                                               wli+v+rl++++k+++++++f++++++if+Plfe+t+
   EPX73427.1 415 tdndiegrylaeltkevftdlrtqkyqmaeyrisiygrnkeewdklaawiidnklysanarWLIQVPRLYDIYKKSGIVHNFEEVVRNIFEPLFEVTK 512
                  ************************************************************************************************** PP

                  -GC.STCCHHHHCCCCCCCCCCHCCT-EEEEEECCETTTCCGHCCCHHHHHHCCCCCCCCCCCCC-TTSTTGGGHHHHHCCCCHTT-EEEEEESSSS- CS
  A_deaminase 106 gpq.lpelevvlkvvdgfdsvedeskvkerlilvksrkpeewseeinelasyyrdytvvnldllndekiepaslflklraeagkstllltpHaGEagg 202
                  +p  +p+l+v+l++v gfdsv+desk +er++ +k++ p++w   +n+++sy+++y+++n+++ln            +r+ +g++t++l+pH+GEag+
   EPX73427.1 513 DPSsHPKLHVFLQRVVGFDSVDDESK-PERRTYRKFPLPAHWNIGLNPPYSYWLYYMYANMTSLN-----------AWRKMRGFNTFVLRPHCGEAGD 598
                  **************************.**************************************...........********************** PP

                  CHHHHHHHHCS--SCECE-GGGGGSHHHHHHHHHCT-EEEE-HHHHCCCSST-TTTT-CHHHHHHTT-EEEE--BSCCCCT-S...HHHHHHHHHHHH CS
  A_deaminase 203 lehvveAllllkaerigHGvrlrkdpvLqyllalaqiplevcPlSNvalgafleyaenPlkeflerglnvslntDDPlqfgtt...LieeYaiaaqvf 297
                  ++h+++A+ll  ++ i+HG++lrk+p+Lqyl++l+qip++++PlSN+al  fl+y++nP+  +++rglnvsl+tDDPlqf +t   LieeYa+aaq++
   EPX73427.1 599 TDHLASAFLL--SQGIAHGILLRKVPFLQYLWYLDQIPIAMSPLSNNAL--FLAYDKNPFISYFKRGLNVSLSTDDPLQFAFTrepLIEEYAVAAQIY 692
                  **********..*************************************..*********************************************** PP

                  T--HHHHHHHHHHHHHCSSS-HHHHHHHCH CS
  A_deaminase 298 klseedlaelarNsvkqsflsadekkklld 327
                  kls++d++elarNsv+qs+++++ k+++l+
   EPX73427.1 693 KLSNVDMCELARNSVLQSGFERQIKSRWLG 722
                  ****************************98 PP

>> Toprim  Toprim domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   3.4e-05       0.3      21      95 ..     348     440 ..     335     448 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 3.4e-05
                 TEEEEEEESSSSEEEHS....TTEEEEE...........ECTTTHHHHHHHHHHHHHHS........EEEEECSSSHHHHHHHHHHHHHHTHHHTTTE CS
      Toprim  21 gfqavtaslGhildlet....efkpvye...........eiedkkkvlkalkelakrad........eiilatDpDreGeaiawellevlkellenki 95 
                  + +v++  G+ l+l++          +            ++   +++  +++  ++++         i+l tD+D eG+ +a +  ev+ +l  +k+
  EPX73427.1 348 PNEKVIWRDGKFLTLQEvfdsL-----KltsydlsidtlDMHAHADTFHRFDKFNLKYNpigesrlrTIFLKTDNDIEGRYLAELTKEVFTDLRTQKY 440
                 5678889999999999944440.....24444454546677777777777888888888888888889*******************99997666544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (835 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       569  (0.0317363); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.71u 0.32s 00:00:01.03 Elapsed: 00:00:00.49
# Mc/sec: 5162.53
//
Query:       EPX73428.1  [L=89]
Description: F0-ATPase subunit E [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.3e-18   65.4   0.3    4.8e-18   65.3   0.3    1.1  1  ATP-synt_E       ATP synthase E chain
  ------ inclusion threshold ------
        0.1   11.8   0.0       0.12   11.6   0.0    1.1  1  Beta_lactamase3  Putative beta-lactamase-like family


Domain annotation for each model (and alignments):
>> ATP-synt_E  ATP synthase E chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.3   0.3   5.4e-22   4.8e-18      10      68 ..       7      65 ..       4      89 .] 0.84

  Alignments for each domain:
  == domain 1  score: 65.3 bits;  conditional E-value: 5.4e-22
  ATP-synt_E 10 invlRysaLalGvvyGakrqrslkseekkeekereleaqekliekakaayakkkqakse 68
                +++lR+saLa+G+  G  ++rs+ ++ek+++ e+++++q++lie+ak+aya++kq+ ++
  EPX73428.1  7 MKTLRWSALAAGLGVGWLEYRSHAKCEKQHAIEHQYHQQQALIEDAKKAYARSKQPLQP 65
                79*****************************************************9984 PP

>> Beta_lactamase3  Putative beta-lactamase-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   1.3e-05      0.12     141     184 ..       6      49 ..       3      64 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 1.3e-05
  Beta_lactamase3 141 yfddltieakaagtflGWvnyllevekkkilayisslslkkkls 184
                      ++++l   a aag+++GW  y  + + +k  a+  ++ +++ l 
       EPX73428.1   6 NMKTLRWSALAAGLGVGWLEYRSHAKCEKQHAIEHQYHQQQALI 49 
                      6777888899**************99999888877777766654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       825  (0.0460148); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.28s 00:00:00.69 Elapsed: 00:00:00.45
# Mc/sec: 588.70
//
Query:       EPX73429.1  [L=474]
Description: glutamyl-tRNA(Gln) amidotransferase subunit A [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.6e-100  336.5   0.0   3.1e-100  336.2   0.0    1.0  1  Amidase   Amidase


Domain annotation for each model (and alignments):
>> Amidase  Amidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  336.2   0.0  1.8e-104  3.1e-100      43     451 .]      54     467 ..      41     467 .. 0.95

  Alignments for each domain:
  == domain 1  score: 336.2 bits;  conditional E-value: 1.8e-104
                 ....TTTT-EEEEETTB--TTSB--TTSGGGTT-B-SS--HHHHHHHHTT-EEEEEE--SGGG-SSSSTT-TT---BBTTCTCC..B--SSSHHHHHHH CS
     Amidase  43 kekgpLhGvPisvKDnidvkgvpttaGskalenypaekDatvverLkkaGavilgkTnmdefamgsstensvfgptrNPwdksr..tpGGSSGGsAAav 139
                 k++ pL G  i++K+n+++k + t+a+s++l +y+++++at+ve L+k+G vi+gkTnmdefamg+st n++ g+t  P   ++   +GGSSGG+AA v
  EPX73429.1  54 KKTLPLGGKLITIKENMCTKYWTTSASSEILHDYVSPFEATLVEALEKNGGVIIGKTNMDEFAMGTSTHNTLHGRTAFPHTDNElyQVGGSSGGCAASV 152
                 6899***************************************************************************98887679************ PP

                 HTTSSSCEEEEESSSTTHHHHHHCTSEEEE--TTSC--TTB--SSTTT-EEEEEESSHHHHHHHHHHHBS--TT-TTS----..HHHHHHHHCTT---T CS
     Amidase 140 AaglvplaiGtDtGGSiRiPAsfcglvGlKPtygrvSragvvalessldvvGplarsvedlalllrvilgedpkdstssvip..eesedlaeelkkslk 236
                 Aa+l+ ++iGtDtGGS+R PA++ g+vG+KP++gr+Sr+gv+++++s+d+vG+ a++v  +  +++v+ ++d+kd t++ i   +   d     k++++
  EPX73429.1 153 AADLAFASIGTDTGGSVRSPAAYVGCVGFKPSFGRISRYGVIPFAHSMDTVGIVAKDVGSVQTVFDVLDQPDSKDATCLTIQlrKTIDDHCHYFKSTER 251
                 ********************************************************************************99987778889999***** PP

                 T-EEEEEGGGCSS---CCHHHHHHHHHHHHHCTT-EEEEEE-CCGGGHHHHHHHHHHHHHHHHTTT-SSSSS.---SS-SCCCCCCCHHHHCCS-HHHH CS
     Amidase 237 glriGvvkedgvasldpevqravekalkaLeeaGhevvevelpsleealslyylilvaeassnlarylgvry.erlsetkvlsellpksraellgeevk 334
                 ++++Gv+++ + ++ +pev +  +++l  Le++G+ev e++lp+  + ls+y ++++ae+ +nlar+ +  +  +l+e +  + +   +r++l+g ev+
  EPX73429.1 252 PVVVGVPTDWNITETHPEVLQKWNEFLSLLESQGCEVREIQLPNSLYGLSIYAALAYAEGVTNLARFSNPIFgSKLQEGEFHDGV--DPRSHLMGLEVQ 348
                 *****************************************************************99999887777777764444..4699******** PP

                 HHHHHHHHHCSCCCCCCCHHHHHHHHHHHHHHHHHHCCC...........BSEEEEESSSSS--BCCCCCHHHCSHHHHHGCCTTT...HHHHHTT--E CS
     Amidase 335 rrielgnyalsaeasskyylkaqkvrrllrrefakafee...........lDvllsPtaptpaprlgekdktidsytvlynlldftavvvpvnlaglpa 422
                  r+  g+y ls ++ +   +kaq +rr+++ ef++ f+            +D++++P++ +p+ ++g+ +       + ++++ ++   vp +laglp+
  EPX73429.1 349 KRLLIGAYSLSFGKDNGINQKAQLMRRAVQLEFNRSFKIpslqesdpsgdVDFIVTPSFLKPTQPIGASS------PTDFLSDSML---VPSSLAGLPS 438
                 *************98889********************9****************************996......57899*****...********** PP

                 EEEECCCCT.TECEEEEEEESTT-HHHHH CS
     Amidase 423 lsvpagksedglPvGvqvigkafqeetlL 451
                 +s+p+gk   glP G+q+i+++++++ lL
  EPX73429.1 439 ISIPFGKICGGLPMGIQLIAQYGDDNSLL 467
                 ********88****************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (474 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       369  (0.0205812); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 3288.71
//
Query:       EPX73430.1  [L=411]
Description: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.6e-64  215.7   0.0    9.5e-64  215.4   0.0    1.1  1  GatB_N    GatB/GatE catalytic domain


Domain annotation for each model (and alignments):
>> GatB_N  GatB/GatE catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  215.4   0.0   5.3e-68   9.5e-64       2     273 .]       7     298 ..       6     298 .. 0.93

  Alignments for each domain:
  == domain 1  score: 215.4 bits;  conditional E-value: 5.3e-68
                 EEEEEEEEEB--SB-SSSSSBSSSSCESTTSS--TTTTTSTT..--EEHHHHHHHHHHHHHTTEEE-SEE-EEEEE-TCTTCTTSEEEEESSS.SEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      GatB_N   2 viGlEiHaqlktksKlFssasteeegeepnsevsevdlalPGtlPvlnkeavelaikaalalnceiaeeskfdRKnyfypdlpkgyQitqkeeplakeG 100
                 +iGlE+  +l++ +KlFssa    ++e+pn++++++d+alPG++P ln ea++la++ alalnc+ia+ ++fdRK  f+pd  +gyQitq+e+pl ++G
  EPX73430.1   7 CIGLEVRFKLAATKKLFSSAYV--KHETPNTSIAYFDAALPGSMPALNPEALRLAVQGALALNCDIASVCQFDRKLTFHPDSLAGYQITQHEMPLGENG 103
                 8********************5..5889*********************************************************************** PP

                 EEEE........TEEEEEEEEEEEE---EEEE.EETTEEEEETTSTT-EEEEEEE-STB-SHHHHHHHHHHHHHHHHHHTSB--SGGGTTEEEEEEEEE CS
                 xxxx........xxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      GatB_N 101 slel........ekkvrierihlEeDaaksvh.eekeeslvdlnRaGvpLiEivtepdlrspeearavveklrellralgvsdgnmeeGslRcDvNvSv 190
                 +++l        + ++ i++++lE+D   sv+ e+ +++++++nRaG  +i iv  p+l++ + a a++ klr++l + g    + e   + c v +S 
  EPX73430.1 104 YIDLsqnldgvkNIRIPIQSVKLEQDIEESVRmEHPKKHFLNFNRAGSSMIKIVVPPCLHDEQIAGALLYKLRMVLLHAGLLYHETELDGMQCRVSISS 202
                 ****888888777777**************99657789************************************************************9 PP

                 CTSETTSSS....--...EEEEEE-SHHHHHHHHHHHHHHHHHHH.......-EEEEEETTTTEEEEECC----...-EEE-TTS--EE--HHHHH CS
                 xxxxxxxxx...xxx...xxxxxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      GatB_N 191 reeekgeee...gtr...vEiKnlnslksiekaieyeierqiell.......qeTrkfdedkgetvslRskeeaedYryfpepdlppleiseelie 273
                 ++e++++++   g +   +E+ nl  +k+++ ai+ e++rq +         ++ r+fde++g+t+ lR+k+  e+Y y+pe+d+pp+++s+++ie
  EPX73430.1 203 NTESSNHKNlisGVKpfeTELENLFLIKNVMAAIQSEVRRQFSPAeendpfqKQVRAFDEKTGRTFFLREKPLFENYLYVPETDIPPISLSKSYIE 298
                 977433333355555555*********************************99***************************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (411 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       464  (0.0258799); expected 358.6 (0.02)
Passed bias filter:                      426  (0.0237604); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2946.54
//
Query:       EPX73431.1  [L=527]
Description: chaperonin-containing T-complex delta subunit Cct4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   2.8e-150  501.2  15.7   3.1e-150  501.0  15.7    1.0  1  Cpn60_TCP1  TCP-1/cpn60 chaperonin family


Domain annotation for each model (and alignments):
>> Cpn60_TCP1  TCP-1/cpn60 chaperonin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  501.0  15.7  1.7e-154  3.1e-150       1     487 [.      31     524 ..      31     527 .] 0.97

  Alignments for each domain:
  == domain 1  score: 501.0 bits;  conditional E-value: 1.7e-154
                 HHHHHHCCSSTTXXEEEEEETTSEEEEEXSHHHHHHCSXXXSHHHHHHHHHHHHCCCCCTTCHHHHHHHHHHHHHHHHHHHHCTXXHHHHHHHHHHHHH CS
  Cpn60_TCP1   1 ladivkttlGPkGmdKmlvnkggkvvvTnDGatilkeleiehPaakllveaaesqdeevGDGTttvviLageLleeaekliaagvhpttiiegyekale 99 
                 +ad+++t+lGP+GmdKm++   g+vv+TnDGatilk+l + hPaak+lv+++++qd e+GDGTt+vv+Lag++l  aekl+++g+hpt+i e +++a+e
  EPX73431.1  31 VADAIRTSLGPRGMDKMIQTGKGEVVLTNDGATILKHLSVLHPAAKMLVDLSAAQDVEAGDGTTSVVVLAGSMLGCAEKLLKKGIHPTVIAESFQRAAE 129
                 689************************************************************************************************ PP

                 HHHHHHHHHXEEBXSCSTT.HHHHHHHHHHCTTSSXXSTHHHHHHHHHHHH.HCHCCCS.EECSCCCEECCCCEECECTTSEEESEEEESS--SST.TS CS
  Cpn60_TCP1 100 kaleaLkeiaveisseekdreeLlkvartslsskltskeaeelsklvvdAv.klieene.keldlgrikvvkieggsledselveGlvldkgvlsp.dm 195
                  ++e ++++  ++++e  dre+Ll++a+tsl+sk++s+ +  l+ ++vdAv k+i+ +  +++dl+ i++vk+ gg ++d+el++Gl+l ++ +++   
  EPX73431.1 130 VTVECMTKN--SLNIELSDRESLLRAATTSLNSKIVSQYSSLLAPIAVDAVlKVIDPRIaTNVDLKDIRIVKKLGGIIDDTELIPGLALTQTAVKTaGG 226
                 ******999..66666779********************************999987779*****************************8888888677 PP

                 SCEEECEEEEEESS-BS--HHCCHHHCCCCSCCHHHHHHHHHHHHHHHHHHHHHHTTECEEEESS-B.....-HHHHHHHHHCT-EEE-S--HHHHHHH CS
  Cpn60_TCP1 196 pkklenakvllldvsLeiektetkttvvlsdaeeleklekaeekqleellekiiksgvnvvvcqkgi.....ddlalhflakngilalrrvkkkdlerl 289
                 p ++e+a+++l++++L+++k++++ ++v++d  +++k++k+e+++l+++++ki+ksg+nv+++qk+i     +dlalhflak +i++++ ++++++e +
  EPX73431.1 227 PSRMEKANIALVQFQLSPPKPDMENQIVVNDYRQMDKILKEERQYLLNMCKKIKKSGANVILIQKSIlrdavNDLALHFLAKLKIMVIKDIERDEVEFI 325
                 ******************************************************************999999*************************** PP

                 HHHHT--EBSCGGGGGCGC-EEEEEEEECCETTCCEEEEECE.SSSSXEEEEEEESTCCCHHHHHHHHHHHHHHHHHHHHHHEEEETTTCHHHHHHHHH CS
  Cpn60_TCP1 290 akatGatavssledltpeelGtakkveeekigsekttiieev.ksgkiatillrgatdtvldeieraiedAlnvvknaiedekvvpGGGatelelakkl 387
                 +k tG+++++++e++t+++lG+a+ vee++ + ek++ + +v + gk++++l rga+  +l+e+er+++dAl+v++++++++ ++pGGG+ e+e+a++l
  EPX73431.1 326 CKSTGCKPIADIESFTEDKLGHADLVEEASSSGEKIVKFMGVkNAGKTVSVLCRGANLLTLEEAERSLHDALCVIRCLVKQRALIPGGGSPEIEAAQHL 424
                 **************************************998835689**************************************************** PP

                 HCCCCTSXCCHHHHHHHHHHHHTHHHHHHHHHCTSXHHHHHHHHHHHHHTTXTTEEEETTTTCEEECCCCTXEEEHHHHHHHHHHHHHHHHHHHCEEEE CS
  Cpn60_TCP1 388 keyaksvsgeeqlaieafakALevipktLaeNaGldpievlaklraahnkgekelgidvesgeiidlveagvvDplkvkrqalksAteaastiLridei 486
                  + a++++g+e+l+++af++ALe+ip tLaeNaGl++i+v+++lr++h++gek++gi+v++g ++d++e++v++p+ v  +++++A+e+ ++i++id+i
  EPX73431.1 425 LDVARTLEGREALCFRAFSEALEIIPVTLAENAGLSAIQVVTELRSRHANGEKTAGINVRKGVVTDILEEKVLQPVLVNISSIQLAAETTKMIMKIDDI 523
                 **************************************************************************************************9 PP

                 E CS
  Cpn60_TCP1 487 i 487
                  
  EPX73431.1 524 T 524
                 6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (527 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       749  (0.0417759); expected 358.6 (0.02)
Passed bias filter:                      532  (0.0296726); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.30s 00:00:00.86 Elapsed: 00:00:00.44
# Mc/sec: 3587.59
//
Query:       EPX73432.1  [L=163]
Description: N alpha-acetylation like protein Nat2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-26   92.0   0.0    3.3e-26   91.7   0.0    1.1  1  DUF1279   Protein of unknown function (DUF1279)


Domain annotation for each model (and alignments):
>> DUF1279  Protein of unknown function (DUF1279)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.7   0.0   1.8e-30   3.3e-26       1      91 [.      47     149 ..      47     150 .. 0.98

  Alignments for each domain:
  == domain 1  score: 91.7 bits;  conditional E-value: 1.8e-30
     DUF1279   1 qklKelfkkYGkvalgvylsislidlgicYllvks.gvd.veelleklklsvkv..........sskkvekksksswgefaiAYaihKilipiRlpiTl 87 
                 q++K l+kkYG++algvyl is id+g+ + lv++ g + + ++++++  s +           ss++ +  ++s w+e+a+AY ihK+li++RlpiT+
  EPX73432.1  47 QRVKDLTKKYGWWALGVYLGISAIDFGLSFALVRTlGTEkIGYIEQSVVGSLRRllnmessdipSSDEPQTYHSSIWTEIAVAYGIHKALIVARLPITA 145
                 79*************************************************8889*********99********************************* PP

     DUF1279  88 aitp 91 
                 ai+p
  EPX73432.1 146 AIVP 149
                 ***9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       390  (0.0217525); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.29s 00:00:00.77 Elapsed: 00:00:00.48
# Mc/sec: 1025.10
//
Query:       EPX73433.1  [L=1457]
Description: anaphase-promoting complex subunit Apc1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.4e-07   30.0   2.2      0.006   17.1   0.0    3.9  4  ANAPC1    Anaphase-promoting complex subunit 1
      8e-05   22.9   9.7       0.26   11.8   0.0    5.1  6  PC_rep    Proteasome/cyclosome repeat


Domain annotation for each model (and alignments):
>> ANAPC1  Anaphase-promoting complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   6.7e-07     0.006       1      45 [.      68     115 ..      68     120 .. 0.85
   2 !    9.7   0.0   0.00013       1.2     107     129 ..     119     141 ..     115     142 .. 0.82
   3 ?   -4.1   0.3         2   1.8e+04      75      96 ..     177     198 ..     166     214 .. 0.57
   4 ?   -1.0   1.4      0.27   2.4e+03      78     112 ..    1363    1402 ..    1318    1413 .. 0.41

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 6.7e-07
      ANAPC1   1 aLvVllkdqahiyfls...GeshtvpLpFevasvfplpkGlllqRkpe 45 
                 a+vV+l+d  +iy+++    ++++v++pF ++s+++ pkG+ l+R ++
  EPX73433.1  68 AIVVILDDIGYIYYVNdqnNDTYIVNIPFSTKSAWSSPKGIYLERLYA 115
                 6899999999999987533459**********************9775 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00013
      ANAPC1 107 kkdsslPslfsLtdPlsevglvv 129
                  k++ +P++f+L  Pl+e++l++
  EPX73433.1 119 DKNDGWPRIFCLNGPLDELSLIR 141
                 35566**************9987 PP

  == domain 3  score: -4.1 bits;  conditional E-value: 2
      ANAPC1  75 ssqtssqkttfstesrgspkrl 96 
                 s++++++ +t+s+ srg+ ++ 
  EPX73433.1 177 SRFSDTNAHTVSQRSRGKRRSS 198
                 3444455555555555554443 PP

  == domain 4  score: -1.0 bits;  conditional E-value: 0.27
      ANAPC1   78 tssqkttfste.....srgspkrlsltlsstleskkdssl 112 
                   +  k++++++      ++s  +++l+l+ +l++ ++++l
  EPX73433.1 1363 FEGPKNALNQAtqsksRTNSALSTKLSLTMSLSELSNDQL 1402
                  2222222222100000222222222222222222344444 PP

>> PC_rep  Proteasome/cyclosome repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.7   1.6e+04      16      31 ..     421     438 ..     418     440 .. 0.77
   2 ?    0.9   0.0     0.086   7.7e+02       2      14 ..     919     931 ..     918     940 .. 0.86
   3 !   11.6   0.5   3.4e-05      0.31       1      23 [.     959     982 ..     959     985 .. 0.92
   4 !   11.8   0.0   2.9e-05      0.26       3      28 ..    1101    1126 ..    1101    1128 .. 0.94
   5 ?   -2.5   0.0         1     9e+03       9      22 ..    1161    1174 ..    1161    1175 .. 0.85
   6 ?   -1.4   0.1      0.43   3.8e+03       4      15 ..    1194    1205 ..    1194    1205 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.7
                 H..HHHHHHHHHHHHHSS CS
      PC_rep  16 e..eaislLkpylsdtsa 31 
                 e  e+++ L+++++ +s+
  EPX73433.1 421 EypETTDTLEEVIYFPSS 438
                 555899*****9998876 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.086
                 HHHHHHHHCTTST CS
      PC_rep   2 AllALGlihaGsg 14 
                  +l++Gl++ +s+
  EPX73433.1 919 GILGIGLLFFNSC 931
                 79******99987 PP

  == domain 3  score: 11.6 bits;  conditional E-value: 3.4e-05
                 HHHHHHHHHCTTSTCH.HHHHHHH CS
      PC_rep   1 GAllALGlihaGsgne.eaislLk 23 
                 +A +ALGli++G g++ ++++ Lk
  EPX73433.1 959 AAGFALGLINLGKGSNlPGMADLK 982
                 699*************99999997 PP

  == domain 4  score: 11.8 bits;  conditional E-value: 2.9e-05
                  HHHHHHHCTTSTCHHHHHHHHHHHHH CS
      PC_rep    3 llALGlihaGsgneeaislLkpylsd 28  
                  +l+LGl + Gsgn  a ++L++ l++
  EPX73433.1 1101 CLSLGLRFVGSGNLKAKEILLNFLDN 1126
                  8********************99976 PP

  == domain 5  score: -2.5 bits;  conditional E-value: 1
                  HCTTSTCHHHHHHH CS
      PC_rep    9 ihaGsgneeaislL 22  
                  ++aG+++ ea++ L
  EPX73433.1 1161 VMAGYCDLEALQRL 1174
                  79*******99866 PP

  == domain 6  score: -1.4 bits;  conditional E-value: 0.43
                  HHHHHHCTTSTC CS
      PC_rep    4 lALGlihaGsgn 15  
                  +ALG++ +G g+
  EPX73433.1 1194 MALGILTLGEGR 1205
                  79*******886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1457 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       506  (0.0282224); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.86u 0.25s 00:00:01.10 Elapsed: 00:00:00.46
# Mc/sec: 9436.91
//
Query:       EPX73434.1  [L=483]
Description: AGC/PKA protein kinase Pka1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.7e-69  233.0   0.0    6.8e-69  232.2   0.0    1.4  2  Pkinase       Protein kinase domain
    1.3e-33  116.4   0.0      2e-33  115.8   0.0    1.2  1  Pkinase_Tyr   Protein tyrosine kinase
    6.4e-06   25.7   0.0    1.4e-05   24.6   0.0    1.6  1  Kinase-like   Kinase-like
  ------ inclusion threshold ------
       0.01   14.9   0.0      0.016   14.3   0.0    1.2  1  Seadorna_VP7  Seadornavirus VP7
      0.014   15.3   0.1      0.024   14.6   0.1    1.3  1  APH           Phosphotransferase enzyme family
       0.15   11.4   0.0       0.35   10.2   0.0    1.6  1  Rad21_Rec8    Conserved region of Rad21 / Rec8 like protein
        3.3    6.3   8.2        4.1    6.0   8.2    1.1  1  Ndc1_Nup      Nucleoporin protein Ndc1-Nup
        6.6    6.8   7.4         10    6.2   7.4    1.2  1  Podoplanin    Podoplanin


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       2.3   5.1e+03     177     222 ..      52      96 ..      46     117 .. 0.46
   2 !  232.2   0.0     3e-72   6.8e-69       4     264 .]     175     427 ..     172     427 .. 0.96

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 2.3
                 HHHHHHHHHHHH.HHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTS CS
     Pkinase 177 kvDvWslGvily.elltgkppfsgekgkekvekeldqlekilkilge 222
                 +  vW+ G+  + e  t ++p ++  ++e  + e++q ++  ++ ++
  EPX73434.1  52 SNNVWTSGIPAAlEEATMTQPAPS--TSEGPQVETMQSMQQKEVATP 96 
                 556677776432144444444442..222223333333333333332 PP

  == domain 2  score: 232.2 bits;  conditional E-value: 3e-72
                 EEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHHHH CS
     Pkinase   4 leklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseeeak 101
                 l++lG+GsfG+V  + +k+++  +A+K+++k+k  ++k+ +++  E  il +++hp+i  l+++f++ ++l++v++++eggel++ll++   ++e+ ak
  EPX73434.1 175 LQTLGTGSFGRVHLVQSKHNRLFYAIKVLEKRKVVDMKQvEHTCDERYILSRVQHPFITILWGTFQDAKNLFMVMDFAEGGELFSLLRKCHRFPEKVAK 273
                 689*************************************************************************************9999******* PP

                 HHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-STTTS CS
     Pkinase 102 kiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelessskltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgkppfsge 200
                 ++a++++ +l+ylH+++i++rDlKpeN+L+d+ g+lKi+DFG+ak++++++   + +gt++YlAPE+++ ++y k++D+WslG+ ++e+l+g ppf++e
  EPX73434.1 274 FYAAEVILALDYLHHNQIVYRDLKPENLLLDRFGHLKIVDFGFAKRVSTNN-CFTLCGTPDYLAPEIISLKPYNKAADWWSLGIFIFEMLAGYPPFYSE 371
                 *************************************************98.99*******************************************88 PP

                 SHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTT.....HHHHHTSGGG CS
     Pkinase 201 kgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRlt.....aeellqhpyl 264
                 +  + +e++l+              ++  ++ +s+  +dl++ ll++d ++R++      ++++ hp++
  EPX73434.1 372 NPMKLYENILEG-------------SISYPQYFSQASIDLMDHLLQRDITNRYGnlkdgSMDIIMHPWF 427
                 888777777776.............788999**********************999999999******8 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.8   0.0   9.1e-37     2e-33       3     249 ..     174     410 ..     172     413 .. 0.90

  Alignments for each domain:
  == domain 1  score: 115.8 bits;  conditional E-value: 9.1e-37
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEEST..TSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlke..eateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkeke 98 
                  + ++lG G+fG+V+  + k    ++++  a+K+l++    + ++ e+ ++e  i+++++hp i  l g   ++++l++v+++++gG+L + Lrk   +
   EPX73434.1 174 FLQTLGTGSFGRVHLVQSK----HNRLFYAIKVLEKrkVVDMKQVEHTCDERYILSRVQHPFITILWGTFQDAKNLFMVMDFAEGGELFSLLRKC--H 265
                  5689**********99999....889999****955114577779999**********************************************9..7 PP

                  TSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHHH CS
  Pkinase_Tyr  99 kltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfGvllw 196
                  ++  k    +a++v  +++yL+++++v rdl   N Ll++  + ki DfG a+++   ++ ++  +      ++apE+++ k +++++D Ws G++++
   EPX73434.1 266 RFPEKVAKFYAAEVILALDYLHHNQIVYRDLKPENLLLDRFGHLKIVDFGFAKRV---ST-NNCFTLCGTPDYLAPEIISLKPYNKAADWWSLGIFIF 359
                  88888888899********************************************...22.23333445669************************** PP

                  HHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS CS
  Pkinase_Tyr 197 EiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeR 249
                  E++  g  p+ + ++++++e++ eg  ++ p++ +++  +lm + +++d ++R
   EPX73434.1 360 EMLA-GYPPFYSENPMKLYENILEGS-ISYPQYFSQASIDLMDHLLQRDITNR 410
                  ***9.*****************9986.789999**********9999999888 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.0   6.2e-09   1.4e-05     136     260 ..     263     378 ..     243     410 .. 0.74

  Alignments for each domain:
  == domain 1  score: 24.6 bits;  conditional E-value: 6.2e-09
  Kinase-like 136 ethkkletiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvlseve..kgfaPpEllgsrggytrknktkmthkl 231
                  + h+  e++a+ +  +++i    +L+++++v  +++++nllld+ g l++ +f+   r+ t+    + +    +  pE+++ +          +  + 
   EPX73434.1 263 KCHRFPEKVAKFYA-AEVILALDYLHHNQIVYRDLKPENLLLDRFGHLKIVDFGFAKRVSTNNCF-TLCgtPDYLAPEIISLKP---------YNKAA 349
                  44666677787776.7888889**********************************999999985.333234577789998833.........34478 PP

  Kinase-like 232 daWqlGlviyriwclklPltlateeakee 260
                  d W lG+ i+ + + + P+    +    e
   EPX73434.1 350 DWWSLGIFIFEMLAGYPPFYSENPMKLYE 378
                  *************9999998777765554 PP

>> Seadorna_VP7  Seadornavirus VP7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   7.2e-06     0.016     151     187 ..     280     314 ..     259     325 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 7.2e-06
  Seadorna_VP7 151 lkdLmdfhsestnllhGDcnpenlmcDknGylklvDP 187
                   + +L  +h  ++++++ D +penl+ D++G lk+vD 
    EPX73434.1 280 ILALDYLH--HNQIVYRDLKPENLLLDRFGHLKIVDF 314
                   56788899..8999**********************5 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.1   1.1e-05     0.024     163     197 ..     286     318 ..     224     319 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1.1e-05
                 SS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-E CS
         APH 163 elptvllHgDlhpgNllvdpddgrvtGviDfedag 197
                   + +++ +Dl+p Nll+d + g++  ++Df++a+
  EPX73434.1 286 LHHNQIVYRDLKPENLLLD-RFGHL-KIVDFGFAK 318
                 5679***************.77777.8*****995 PP

>> Rad21_Rec8  Conserved region of Rad21 / Rec8 like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   0.00016      0.35      22      42 ..     195     215 ..     194     216 .. 0.94

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00016
                 HHHHHHHHHHHHTSEEEEESS CS
  Rad21_Rec8  22 rlFyelLvLatkgvIkvkQea 42 
                 rlFy + vL +++v+++kQ +
  EPX73434.1 195 RLFYAIKVLEKRKVVDMKQVE 215
                 89*****************75 PP

>> Ndc1_Nup  Nucleoporin protein Ndc1-Nup
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   8.2    0.0018       4.1     348     466 ..      15     127 ..      11     215 .. 0.54

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0018
    Ndc1_Nup 348 qrinergqpapkaapskapknkasapvkelprlsksplkkk.ddeifgn......sltaeaspkssssskegvekalsslakspgqspsptarls.... 435
                 ++++ +++ +p+ +p ++++n++s +++++++  k ++++  +     +      + ++ ++p++s+s   +ve+  +s+ ++ +++  p +++s    
  EPX73434.1  15 SKVDGYMDRQPEDKPDSPAQNQTSDESQDQSSAEKGSSNNVwT-----SgipaalEEATMTQPAPSTSEGPQVETM-QSMQQKEVAT--PEQQASsnft 105
                 5788888844444442334555555555555555444444343.....3444458777778888876777777774.3333333333..3333333222 PP

    Ndc1_Nup 436 ....prarkllekaksrllskeqkealsestikkk 466
                     +       ++++++        ++e++++k+
  EPX73434.1 106 dksvA-------SSSDAASR------STENNQYKN 127
                 22222.......22222222......222222222 PP

>> Podoplanin  Podoplanin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   7.4    0.0046        10      35     112 ..      40     117 ..      19     136 .. 0.73

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0046
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----GGG-XXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Podoplanin  35 pgvedekvtpGvednvvttgaseepyesglttlvptstesvtdlrledlptaestvkakeesqstttlnvvtshstek 112
                  + +++ + +G ++nv t g   + +e+ +t   p   e    + ++ ++ +e+++ +++ s + t ++v++s+    
  EPX73434.1  40 ESQDQSSAEKGSSNNVWTSGIPAALEEATMTQPAPSTSEGPQVETMQSMQQKEVATPEQQASSNFTDKSVASSSDAAS 117
                 4566788999**********************9999888888888888888888888888777777777765544321 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (483 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1228  (0.0684924); expected 358.6 (0.02)
Passed bias filter:                      584  (0.0325729); expected 358.6 (0.02)
Passed Vit filter:                        70  (0.00390429); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.69u 0.34s 00:00:01.03 Elapsed: 00:00:00.51
# Mc/sec: 2855.90
//
Query:       EPX73435.1  [L=437]
Description: PAF family phospholipase A2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.4e-99  330.8   0.0    9.2e-99  330.5   0.0    1.0  1  PAF-AH_p_II      Platelet-activating factor acetylhydrolase, 
    4.6e-07   29.0   0.0    2.3e-05   23.5   0.0    2.2  2  Chlorophyllase2  Chlorophyllase enzyme
    0.00043   19.4   0.1     0.0027   16.8   0.0    1.9  2  Chlorophyllase   Chlorophyllase
     0.0063   16.4   0.0      0.011   15.6   0.0    1.3  1  Lipase_3         Lipase (class 3)
  ------ inclusion threshold ------
       0.17   10.4   0.0       0.28    9.7   0.0    1.2  1  MmgE_PrpD        MmgE/PrpD family


Domain annotation for each model (and alignments):
>> PAF-AH_p_II  Platelet-activating factor acetylhydrolase, isoform II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  330.5   0.0  2.6e-102   9.2e-99       7     362 ..       9     415 ..       4     429 .. 0.92

  Alignments for each domain:
  == domain 1  score: 330.5 bits;  conditional E-value: 2.6e-102
                  SSS---SSSSEEE.............EEEEEESSSTTSEEEEEEEEE...S.SSSS-EEESS-SHHHHHHHHHHHTS-HHHHHHH.HHHHTT-EEEEE CS
  PAF-AH_p_II   7 kklpavsGpysvG.............CedlmieeklrgvflRlyypld..kadedredelWlPkkeyaqGlsevlkasrlllnllfkllvgslrlpvk 89 
                    lp+++Gp+ vG              +   ie++l++v+lR++yp+   ++  +r+de WlP++e   G+++++k++++++ ++ +  ++++ lpv+
   EPX73435.1   9 AALPEYEGPLRVGsvviemsvpkelqWKLPNIEHELKTVKLRMFYPIFptEDLRSRKDEFWLPFNE---GIPHIAKGFKWWVIRACAAQFSKTSLPVY 103
                  679******************9998878888***************987788899***********...***************************** PP

                  ET--B--S..S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT.......--EEEE-----GGGHHHHHHHHH CS
  PAF-AH_p_II  90 knellktk..ekyPlivFsHGLgafRtlYsalcielAskGfvvaavEHrDesAaatyvlkdklaaeeeeevvesrekewiklrkvkeeeevklrneqv 185
                  ++  ++ +   k+P+++FsHGL ++R+lYs+lc+++ s+G+vv+a+EHrD+ A++++v +d+++++ + + v++re     +++++ +e+++l+++++
   EPX73435.1 104 EGTVFQDNqnTKLPVLLFSHGLLGSRNLYSSLCGNISSYGIVVLALEHRDQTAIISTV-RDPSHPDDKGYLVQYRE-----IKDFYSKETIELQKDRL 195
                  *****9987789**********************************************.*****************.....9**************** PP

                  HHHHHHHHHHHHHHHHHH.TT-----S...S--SS-.....GGGGTT-EEEEE..EEEEEETHHHHHHH...HHHHH-........TTS-EEEEES-- CS
  PAF-AH_p_II 186 kqRaqEcskaLkllrein.lGepvenv...ldsdfd.....lqqlKdnldtsk..vaviGHsFGgAtvi...kslsed........teFrcaialDaW 261
                   +R +E++ a+k++r in  G p  +       + d     +++lK+ l+tsk  + + GHsFG+At++   +sl++          e++c +++D+W
   EPX73435.1 196 SFREREIQLAVKMIRTINeYGVPSLDTaysCSGNPDtcrqlFESLKGRLNTSKgeLLLSGHSFGAATAAfiaNSLARSldcnnlhhEEYKCVLLYDIW 293
                  ******************889998877666333333777899***********999************9999555554556678889*********** PP

                  -TTS-GGGGGG--S-EEEEEETTT--HHHHHHHHT......................T--TTS-EEEEEETT--GGGGSGGGGSS-HHHHHHTTSS-S CS
  PAF-AH_p_II 262 mlPveeevyskvrqPllfinsekfqtaedikkmkk......................vvslkkeskvitvkGsvHqnfsDftfvlgkligkvlklkge 337
                  mlPv +   +k+++P+++i s++f++ +d+  +++                      ++++kk s+v++++G+vH+n+sD++++l+++i k+lk+k +
   EPX73435.1 294 MLPVLQMNIQKIKYPTMMIVSYEFRHWADNYDALEnwlldrkseskvdeetssdkfeIIPTKKPSHVFVLDGTVHANQSDLPILLPSMIFKLLKGKVK 391
                  ***************************999999999************************************************************** PP

                  S-HHHHHHHHHHHHHHHHHHHHT-- CS
  PAF-AH_p_II 338 idpeealdiankaslaFLqkhldlk 362
                  +dp+eal i+ ++s++FL+++ +++
   EPX73435.1 392 ADPYEALMINARSSVQFLREN-GVQ 415
                  *******************98.322 PP

>> Chlorophyllase2  Chlorophyllase enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.0   6.3e-09   2.3e-05       8      51 ..     107     150 ..     101     192 .. 0.86
   2 !    3.4   0.0    0.0085        30      78     112 ..     237     271 ..     232     308 .. 0.83

  Alignments for each domain:
  == domain 1  score: 23.5 bits;  conditional E-value: 6.3e-09
  Chlorophyllase2   8 vvaPteageYpvllflhGylllnslYsqlLkhiashgfivvapq 51 
                      v++ +++ + pvllf hG+l   +lYs+l  +i+s+g +v+a +
       EPX73435.1 107 VFQDNQNTKLPVLLFSHGLLGSRNLYSSLCGNISSYGIVVLALE 150
                      677788999********************************984 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.0085
  Chlorophyllase2  78 esvlpeevepdlsklalsgHSrGgktafalalgka 112
                       + l+  ++    +l lsgHS G+ ta+ +a   a
       EPX73435.1 237 FESLKGRLNTSKGELLLSGHSFGAATAAFIANSLA 271
                      5566777777788999**********998886655 PP

>> Chlorophyllase  Chlorophyllase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   7.7e-07    0.0027      41      78 ..     111     148 ..      94     160 .. 0.89
   2 ?    0.0   0.0     0.095   3.4e+02     109     141 ..     238     270 ..     224     279 .. 0.76

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 7.7e-07
  Chlorophyllase  41 aeaGtypvvlflhGtllsnkfyskllnhiashGfivva 78 
                     +++ + pv+lf hG l s + ys+l   i+s+G +v+a
      EPX73435.1 111 NQNTKLPVLLFSHGLLGSRNLYSSLCGNISSYGIVVLA 148
                     566789*****************************998 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.095
  Chlorophyllase 109 avlptsveanlsklalvGhsrGGktafalalgy 141
                     + l+   ++    l l+Ghs G  ta  +a   
      EPX73435.1 238 ESLKGRLNTSKGELLLSGHSFGAATAAFIANSL 270
                     5666677777788999*******9997666544 PP

>> Lipase_3  Lipase (class 3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0     3e-06     0.011      50      88 ..     235     272 ..     203     287 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 3e-06
                 HHHHHHHHHHHHTT-EEEEEEEETHHHHHHHHHHHHHHH CS
    Lipase_3  50 qvlkelkrllekypeysivvtGHSLGgalAlLaaldlve 88 
                 q++++lk  l+  +  ++ ++GHS+G+a+A+++a  l++
  EPX73435.1 235 QLFESLKGRLNTSK-GELLLSGHSFGAATAAFIANSLAR 272
                 56666666444444.699***************999986 PP

>> MmgE_PrpD  MmgE/PrpD family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   7.7e-05      0.28      42      93 ..     231     282 ..     223     286 .. 0.93

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 7.7e-05
                 HHHHTT-SSSTT-B-TT-EE-TTSS-EE-HHHHHHHHHHHHHCTS-S-BEES CS
   MmgE_PrpD  42 pavkkaleavkgtggpggatvigtgerlspvkAAfvnGaaihalDfdDthla 93 
                 + ++++ e +kg+  + + +++ +g+ + +++AAf+   ++++lD +  h++
  EPX73435.1 231 DTCRQLFESLKGRLNTSKGELLLSGHSFGAATAAFIANSLARSLDCNNLHHE 282
                 68999999*****************************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (437 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       342  (0.0190752); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 3149.68
//
Query:       EPX73436.1  [L=261]
Description: THO complex subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.7e-08   31.9   0.0    1.6e-07   31.0   0.0    1.5  1  RRM_1            RNA recognition motif. (a.k.a. RRM, RBD, or 
     0.0001   22.8   0.7     0.0001   22.8   0.7    3.1  2  FoP_duplication  C-terminal duplication domain of Friend of P
  ------ inclusion threshold ------
      0.023   14.7   0.1      0.053   13.6   0.1    1.6  1  DUF3759          Protein of unknown function (DUF3759)


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.0   0.0   2.7e-11   1.6e-07       1      70 []      91     159 ..      91     159 .. 0.97

  Alignments for each domain:
  == domain 1  score: 31.0 bits;  conditional E-value: 2.7e-11
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrelk 70 
                 ++++nL+++++ee+++ l+s+f p  si++ +d+ g+s g++   F sk +A +A+++l g+ ++++++k
  EPX73436.1  91 VIIENLHYELSEENIRSLLSDFHPH-SIEVDYDRAGRSEGTCRAFFFSKGEASNAVNSLEGRFVNDQPIK 159
                 689**********************.****************************************9986 PP

>> FoP_duplication  C-terminal duplication domain of Friend of PRMT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   4.3      0.56   3.4e+03      25      46 ..      24      42 ..      12      55 .. 0.42
   2 !   22.8   0.7   1.7e-08    0.0001      26      61 ..     182     217 ..     171     245 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.56
  FoP_duplication 25 rggrggrgrgrggrggrkkkkp 46
                     r g++ r++   +r+    kkp
       EPX73436.1 24 RTGKSDRQKRITKRR---GKKP 42
                     222222222222222...2222 PP

  == domain 2  score: 22.8 bits;  conditional E-value: 1.7e-08
  FoP_duplication  26 ggrggrgrgrggrggrkkkkpltkeeLDaeLDaYmg 61 
                      +   +r+  r++++++++++ ++ e+LD+eLDaY +
       EPX73436.1 182 KEAPSRKLRRSNKKRNSQAHSISHEDLDRELDAYAA 217
                      345667777777777899****************98 PP

>> DUF3759  Protein of unknown function (DUF3759)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   8.8e-06     0.053      11      39 ..     204     232 ..     191     247 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 8.8e-06
     DUF3759  11 hkaklshellagAAafeAvkayedhqrke 39 
                  +  l  el a AA+++A   +ed+q+++
  EPX73436.1 204 SHEDLDRELDAYAASYQAPASFEDKQENS 232
                 25678999******************974 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       803  (0.0447878); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.29s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 1691.58
//
Query:       EPX73437.1  [L=403]
Description: ubiquitin ligase complex subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-29  103.3   1.4    1.1e-29  103.3   1.4    2.0  2  CLTH        CTLH/CRA C-terminal to LisH motif domain
    1.6e-07   31.0   1.0    3.6e-07   29.9   0.0    2.1  2  LisH        LisH
  ------ inclusion threshold ------
       0.21   11.7   4.1      0.094   12.8   1.6    1.7  2  DUF155      Uncharacterised ACR, YagE family COG1723
       0.21   10.6   1.7       0.26   10.4   0.3    1.9  2  LisH_2      LisH
       0.77   10.0   4.3        3.8    7.8   0.8    3.0  3  OrfB_IS605  Probable transposase
       0.85   10.1   8.4       0.14   12.7   4.2    1.7  2  APG6_N      Apg6 coiled-coil region
        4.9    7.0   6.2        6.2    6.7   2.3    2.2  2  ACCA        Acetyl co-enzyme A carboxylase carboxyltransferas


Domain annotation for each model (and alignments):
>> CLTH  CTLH/CRA C-terminal to LisH motif domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.2      0.43   1.1e+03      18      34 ..      63      79 ..      10     140 .. 0.60
   2 !  103.3   1.4   4.1e-33   1.1e-29       2     147 ..     154     294 ..     153     295 .. 0.96

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.43
        CLTH 18 seaiewinenkpelles 34
                + +i +i ++k++ ++ 
  EPX73437.1 63 DNLILRIRNLKKKMEQL 79
                22222222222222222 PP

  == domain 2  score: 103.3 bits;  conditional E-value: 4.1e-33
        CLTH   2 ikerqkIiklilegdlseaiewinenkpellesnsnLeFkLkllqfielirgktkdieealeyarenlefendehlkelekamsLLafsdpeskelssp 100
                 +k  q+I ++il+++l+e+++w+ e+++ l+++ns+Le +++ ++f+el++ + ++  +a+++ar+++    ++h + l+++++LLa +  ++     +
  EPX73437.1 154 YKRYQQILDSILRHELKEVLAWCAEHRSILKKINSTLELEIRIQRFVELVK-T-NKKVQAINFARTYFGNWTKTHADRLQQVAALLAIPYSSK---VFR 247
                 6889***********************************************.8.999***********999999****************666...77* PP

        CLTH 101 lknlldpsrrekvakefnsailkllglskespLeillsaglsalktl 147
                 ++++l+++r++ +a++f +++ + ++ls+ s L+i+++agls+lkt 
  EPX73437.1 248 YNEYLSDQRWDFLASLFSKTFSQVHSLSSVSILHIAIAAGLSSLKTP 294
                 ********************************************986 PP

>> LisH  LisH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.2       1.2   3.2e+03       1       9 [.      60      68 ..      60      68 .. 0.91
   2 !   29.9   0.0   1.4e-10   3.6e-07       2      25 ..     118     141 ..     117     143 .. 0.94

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 1.2
                HHHHHHHHH CS
        LisH  1 eeLNrLIyd 9 
                +e++ LI++
  EPX73437.1 60 QEIDNLILR 68
                79*****97 PP

  == domain 2  score: 29.9 bits;  conditional E-value: 1.4e-10
                 HHHHHHHHHHHHCT-HHHHHHHHH CS
        LisH   2 eLNrLIydYLvkeGyeetAeaFek 25 
                 +LNrLI dY++++Gy+++A +++k
  EPX73437.1 118 RLNRLIADYMLANGYHDSAIKLCK 141
                 79********************98 PP

>> DUF155  Uncharacterised ACR, YagE family COG1723
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   1.6   3.7e-05     0.094      61     157 ..      28     121 ..       3     125 .. 0.79
   2 ?   -3.2   0.0         3   7.6e+03     119     136 ..     179     196 ..     156     206 .. 0.63

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3.7e-05
      DUF155  61 kgdvivlkskslleklaiShalaqSvkLdvlEesldellestekipkelakkgklklsrkellkktgellslrinlnlkselldtPdff.Weepeles 157
                 k++v  ++++s+    a+   l +S+ L+   +++d+l+ ++++++k++++ +  ++ +k  +++t   l++++ l ++ e ld+P+f+ W++++l++
  EPX73437.1  28 KQEVRQVEHESHAMTSALTGLLQKSIPLESKTQEIDNLILRIRNLKKKMEQLK--EV-EKMHIQRTRLRLQFINTL-SQIEDLDSPEFLdWSKTRLNR 121
                 45555556667888888889999***************************888..55.555556665555555555.588999*****9899999876 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 3
      DUF155 119 rkellkktgellslrinl 136
                 ++++lkk+   l+l i++
  EPX73437.1 179 HRSILKKINSTLELEIRI 196
                 344555555555555444 PP

>> LisH_2  LisH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.3    0.0001      0.26       1      15 [.     119     133 ..     119     133 .. 0.93
   2 ?   -4.2   0.0       3.7   9.4e+03       7      12 ..     250     255 ..     249     258 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.0001
      LisH_2   1 lnsLvaeYLqsqgYn 15 
                 ln L+a+Y+  +gY+
  EPX73437.1 119 LNRLIADYMLANGYH 133
                 688***********8 PP

  == domain 2  score: -4.2 bits;  conditional E-value: 3.7
      LisH_2   7 eYLqsq 12 
                 eYL  q
  EPX73437.1 250 EYLSDQ 255
                 999866 PP

>> OrfB_IS605  Probable transposase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.18   4.6e+02      78     105 ..      24      51 ..      21      54 .. 0.84
   2 ?    7.8   0.8    0.0015       3.8      37      96 ..      46     101 ..      39     103 .. 0.87
   3 ?    1.8   0.0       0.1   2.6e+02      72      99 ..     240     267 ..     184     284 .. 0.75

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.18
  OrfB_IS605  78 arlhrkrsrrrkhllhklathliktlke 105
                 ++ +++  r++ h  h+++++l+  l++
  EPX73437.1  24 RLNFKQEVRQVEHESHAMTSALTGLLQK 51 
                 55678899**************988875 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0015
  OrfB_IS605  37 twflykgrrlksdykylakeiaelqsklkksknykkasrklarlhrkrsrrrkhllhkla 96 
                 t  l k+ +l s+ ++  + i ++  ++kk     ++ +++ ++h +r+r r+ +++ l+
  EPX73437.1  46 TGLLQKSIPLESKTQEIDNLILRIRNLKKKM----EQLKEVEKMHIQRTRLRLQFINTLS 101
                 4578999999999999999999999997777....69*******************9987 PP

  == domain 3  score: 1.8 bits;  conditional E-value: 0.1
  OrfB_IS605  72 kasrklarlhrkrsrrrkhllhklathl 99 
                   s+k+ r+ + +s++r ++l +l ++ 
  EPX73437.1 240 PYSSKVFRYNEYLSDQRWDFLASLFSKT 267
                 568899***************9997765 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   4.2   5.4e-05      0.14      10     106 ..      23     118 ..      20     124 .. 0.85
   2 ?   -2.1   0.1         2   5.2e+03      13      38 ..     164     189 ..     155     212 .. 0.63

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 5.4e-05
      APG6_N  10 LleeldkqleqaekerdaYeeflkklkkekkeeekqdeeleeleeeleklekeeeelleeLkelekereeleaelaaleeelealeeeeerfwreyn 106
                 L  +++++++q+e e  a+++ l  l +++   e++ +e+++l  ++++l+k+ e  l+e +++  +r +l+ +  +  ++ e+l+  e   w++ +
  EPX73437.1  23 LRLNFKQEVRQVEHESHAMTSALTGLLQKSIPLESKTQEIDNLILRIRNLKKKME-QLKEVEKMHIQRTRLRLQFINTLSQIEDLDSPEFLDWSKTR 118
                 666899*****************99887766666578888888888999987655.5789**************************99999998876 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 2
      APG6_N  13 eldkqleqaekerdaYeeflkklkke 38 
                  l ++l+++ + + + ++ lkk++++
  EPX73437.1 164 ILRHELKEVLAWCAEHRSILKKINST 189
                 45556666666666666666666655 PP

>> ACCA  Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   2.3    0.0024       6.2       3      75 ..      26     103 ..      24     107 .. 0.70
   2 ?    1.7   0.1     0.084   2.1e+02      35      87 ..     178     230 ..     151     237 .. 0.75

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0024
        ACCA   3 dfekpiaeleekieelkklaee...sevd...lseeieklekkleklkkeiyknltpwqkvqlaRhpeRpktldyieal 75 
                 +f+++++++e++ + ++++ +    +++     ++ei++l  ++++lkk++ ++l++++k+++ R   R ++ + ++++
  EPX73437.1  26 NFKQEVRQVEHESHAMTSALTGllqKSIPlesKTQEIDNLILRIRNLKKKM-EQLKEVEKMHIQRTRLRLQFINTLSQI 103
                 677888888887776665533323233332225677777778888888776.89***************9988877765 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.084
        ACCA  35 klekkleklkkeiyknltpwqkvqlaRhpeRpktldyiealfedfvelhGDra 87 
                 + ++ l+k+++++  ++     v+l++ +++ ++ ++ ++ f ++++ h Dr 
  EPX73437.1 178 EHRSILKKINSTLELEIRIQRFVELVKTNKKVQAINFARTYFGNWTKTHADRL 230
                 44444555555555566666679999999999999***********9999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (403 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1487  (0.0829383); expected 358.6 (0.02)
Passed bias filter:                      734  (0.0409393); expected 358.6 (0.02)
Passed Vit filter:                        69  (0.00384851); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.60u 0.29s 00:00:00.88 Elapsed: 00:00:00.47
# Mc/sec: 2579.15
//
Query:       EPX73438.1  [L=719]
Description: SDA1 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.5e-85  285.9  42.0    7.9e-83  278.8  38.0    3.1  2  SDA1        SDA1
    1.1e-17   64.0   0.3    2.8e-17   62.7   0.3    1.8  1  NUC130_3NT  NUC130/3NT domain
  ------ inclusion threshold ------
       0.16   12.4   0.2       0.41   11.1   0.2    1.6  1  DEC-1_C     Dec-1 protein, C terminal region
       0.31   11.1  30.1        5.3    7.1   0.3    2.4  2  YL1         YL1 nuclear protein


Domain annotation for each model (and alignments):
>> SDA1  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.1     0.014        62     139     266 ..     252     276 ..     224     347 .. 0.57
   2 !  278.8  38.0   1.8e-86   7.9e-83       1     347 [.     434     716 ..     434     717 .. 0.86

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.014
        SDA1 139 eeeeeeeeeekeekeeeeeeeeeeeeeeeeeeeeeekekkkkkakeaseeekkkekeeekiskaselattrILTpaDFaklkelraeaavkkqlesakr 237
                 ee     e+++ee+++                                                                                   
  EPX73438.1 252 EE-----EDSDEEDTDVG--------------------------------------------------------------------------------- 264
                 11.....11111111111................................................................................. PP

        SDA1 238 kkkkkkdeeeeeaeksedlvtasdiegla 266
                                  +l ++s+i +++
  EPX73438.1 265 -----------------RLMHQSTINKKT 276
                 .................111111111111 PP

  == domain 2  score: 278.8 bits;  conditional E-value: 1.8e-86
        SDA1   1 mnedLLqDLveYkkskdKgVmmAArsLisLyRevnPelLkkkdrGkpaemelrsekkakkfGeeev.aegieGleLlekwkeeekkekreeeeedsdde 98 
                 m++dLLqDL+eYk+skdKgVmmA+r+LisLyRev+P++LkkkdrGk a+mel+ ++++ kfG+e + ++gieGleLle++k+e+k++ +  ee      
  EPX73438.1 434 MTADLLQDLTEYKSSKDKGVMMASRGLISLYREVAPDMLKKKDRGKVASMELK-DRTPIKFGQELNvVHGIEGLELLENYKNENKDDGN--EE------ 523
                 9***************************************************8.89******99777***************9997765..33...... PP

        SDA1  99 ddeedwevesdddseedseggwidvesdeeeieesdesedeeeeeeeeeekeekeeeeeeeeeeeeeeeeeeeeeekekkkkkakeaseeekkkekeee 197
                  d+e+wev ++d++ +++++gw++  sd+e i++sd s++ee++++        ++e+++e           +               ++++++ek+++
  EPX73438.1 524 -DDEKWEVMDNDSD-SEDSEGWVNLGSDDE-INISD-SDEEESDKK--------NKERASE-----------D---------------KAKSDDEKNKQ 584
                 .3467999885544.455589********9.*****.555553222........1111111...........1...............11122223445 PP

        SDA1 198 kiskaselattrILTpaDFaklkelraeaavkkqlesakrkkkkkkdeeeeeaeksedlvtasdieglakkrkatkeerlasvkegredrekfgskkak 296
                 +is+   la+  ILTpaD++kl+elr +a+v++ ++  kr             ++++  v+  dieg++k+ k ++e rla+v+egre+rek+gsk   
  EPX73438.1 585 EISN---LAARSILTPADLKKLEELREKANVDRLVHGPKRA------------HDNDGVVDIYDIEGPKKRIKDDREGRLARVMEGREGREKYGSKS-- 666
                 6777...*****************************98853............56899***************************************.. PP

        SDA1 297 kkekelksttNkeKarkKnfqMtkhkvkskkkrslrekqkalrahlerqkk 347
                 ++ ++  s +Nk K+++Knf+M+khk+k+k+ rsl +k+k+lr+h++r kk
  EPX73438.1 667 NQFNP-TSLSNKRKQKNKNFMMIKHKAKGKAGRSLMQKRKSLRDHIDREKK 716
                 88899.9*******************************************9 PP

>> NUC130_3NT  NUC130/3NT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.7   0.3   6.3e-21   2.8e-17       1      50 [.      63     112 ..      63     114 .. 0.98

  Alignments for each domain:
  == domain 1  score: 62.7 bits;  conditional E-value: 6.3e-21
  NUC130_3NT   1 FlaqvahcYpketkefpqeLselLlehhsvLhpdlRkklvqaLvlLRnKd 50 
                 F+aq++++Y + tk+f++eL++lL+++h++++ +l +k+vqaLvlL+nK 
  EPX73438.1  63 FIAQTCNHYTDITKDFSKELMDLLQKNHAQFPFELSEKIVQALVLLKNKS 112
                 9************************************************7 PP

>> DEC-1_C  Dec-1 protein, C terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.2   9.1e-05      0.41       9      63 ..     252     306 ..     247     311 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 9.1e-05
     DEC-1_C   9 edednkaedilvgeagpqmpenegtarhkvdalglggnkrkksksksappaviny 63 
                 e+ed + ed  vg    q   n+ t     +   +    +kk k k app+ +n+
  EPX73438.1 252 EEEDSDEEDTDVGRLMHQSTINKKTKSREAQVERIRARLKKKEKGKLAPPTNVNF 306
                 7899999********************999999*******************997 PP

>> YL1  YL1 nuclear protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.3    0.0012       5.3      58     114 ..     251     300 ..     173     344 .. 0.65
   2 ?    7.0  24.5    0.0013       5.6      25     177 ..     518     710 ..     504     719 .] 0.49

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0012
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         YL1  58 edeesdeeedeeegekelerqerkkrkkekkkrkaqkkkskkkkkkqkkkkkkkidp 114
                 e+ee+++eed + g   l  q   ++  + k r   +++ ++ +++ kkk+k k++p
  EPX73438.1 251 EEEEDSDEEDTDVG--RLMHQSTINK--KTKSR---EAQVERIRARLKKKEKGKLAP 300
                 22221222222222..2333333333..22333...333333333444555555555 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0013
                 xxxxxxxxxxxxxxxxxxxxxxx..........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         YL1  25 ellFaEeedDeefeseeeeeeee..........nsDsdfdsdeedeesdeeedeeegekelerqerkkrkkekkkrkaqkkkskkkkkkqkkkkkkkid 113
                 ++    eedDe +e  +++ ++e          ++++++ sd+++eesd++++e ++e + +    k++++ +  ++++  +++  kk ++ ++k+++d
  EPX73438.1 518 DD--GNEEDDEKWEVMDNDSDSEdsegwvnlgsDDEINI-SDSDEEESDKKNKERASEDKAKSDDEKNKQEISNLAARSILTPADLKKLEELREKANVD 613
                 33..35899*****9999999987778887753333333.33333344555555555554442222222111222222233333334444444555444 PP

                 x.......................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         YL1 114 p.......................................................qakeprpkkkseraswlpaeslltpkrRkssRastvenkeqle 157
                 +                                                       +                       p+  +++R++  +n + ++
  EPX73438.1 614 RlvhgpkrahdndgvvdiydiegpkkrikddregrlarvmegregrekygsksnqfN-----------------------PTSLSNKRKQKNKNFMMIK 689
                 49999999999**********999999999888877665544444444444433331.......................2222333333333333333 PP

                 xxxxxxxxxxxxxxx.xxxxx RF
         YL1 158 erlkereerrkkile.rmrkk 177
                  + k +  r+  +++   r +
  EPX73438.1 690 HKAKGKAGRSLMQKRkSLRDH 710
                 333333222222222112222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (719 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1543  (0.0860617); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.75u 0.27s 00:00:01.02 Elapsed: 00:00:00.47
# Mc/sec: 4552.46
//
Query:       EPX73439.1  [L=228]
Description: isopentenyl-diphosphate delta-isomerase Idi1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.6e-26   90.9   0.0    9.7e-26   90.4   0.0    1.3  1  NUDIX     NUDIX domain


Domain annotation for each model (and alignments):
>> NUDIX  NUDIX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.4   0.0   5.4e-30   9.7e-26       2     131 .]      51     198 ..      50     198 .. 0.92

  Alignments for each domain:
  == domain 1  score: 90.4 bits;  conditional E-value: 5.4e-30
                 EEEEEEEEEEETTSEEEEEEES..SSSTTT.E....E.SS.......EEECBTTS.HHHHHHHHHHHHHHSEEEEEE.....EEEEEEEEEEEEEEEEE CS
       NUDIX   2 lrravgvvllnekgevLlvrrs..kkpfpg.W....e.lP.......gGkvepgE.tpeeAArREleEEtGleaell.....ellgrlhylapydgpyg 79 
                 l+ra++++l+++++++Ll++r+  k +fp+ W    + +P       g ++++    ++ AA+R+l +E+G++ae +     ++l+r+hylap+ +++g
  EPX73439.1  51 LHRAFSMFLFDNENRLLLQQRAaeKITFPSlWtntcCsHPldvaserGSELDEAIsGVKSAAQRKLLHELGIKAEYIpkdkyQFLTRIHYLAPSIEKWG 149
                 79*****************************988863688******9999***999***************98888888888***************** PP

                 EEEEEEEEEEEEECSGCSST.STTTEEEEEEEEHHHHHHHHTHCTHHHHHHHH CS
       NUDIX  80 deheilyvfleevegelepn.denevsevrwvpleellkeklaaesrkllpwl 131
                  ehei+y+++   +g++e++ ++nev+++++v+++el k++++++++k++pw+
  EPX73439.1 150 -EHEIDYILF--YKGQVELDiNPNEVQAYKYVTMDEL-KAMFEDPQYKFTPWF 198
                 .9********..5555555555***************.**************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       444  (0.0247643); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1698.65
//
Query:       EPX73440.1  [L=701]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.4e-20   72.8   0.9      6e-12   45.2   0.0    3.8  4  RRM_1        RNA recognition motif. (a.k.a. RRM, RBD, or RNP 
    0.00029   20.7   0.2       0.49   10.4   0.0    3.3  3  Nup35_RRM_2  Nup53/35/40-type RNA recognition motif
     0.0048   16.5   0.0        1.7    8.2   0.0    2.6  2  RRM_5        RNA recognition motif. (a.k.a. RRM, RBD, or RNP 
  ------ inclusion threshold ------
      0.041   14.0   0.0       0.18   11.9   0.0    2.1  2  RRM_7        RNA recognition motif
       0.16   12.1   0.0       0.84    9.7   0.0    2.2  2  RRM_3        RNA binding motif


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       1.3   4.6e+03       3      15 ..     246     258 ..     244     303 .. 0.56
   2 !   45.2   0.0   1.7e-15     6e-12       1      61 [.     335     390 ..     335     395 .. 0.95
   3 !    9.3   0.0   0.00027      0.97       1      54 [.     454     501 ..     454     511 .. 0.90
   4 !   14.5   0.0   6.3e-06     0.023       6      52 ..     550     591 ..     545     599 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1.3
                 EESETTTSSHHHH CS
       RRM_1   3 VgnLppdvteeeL 15 
                 ++nLp++++  +L
  EPX73440.1 246 LSNLPSEYKITDL 258
                 5666666654443 PP

  == domain 2  score: 45.2 bits;  conditional E-value: 1.7e-15
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTT CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealng 61 
                 +f+gnLp++  e+eL ++F+kfG+i+s+k+ ++     k++af+ + +  dA + +++l  
  EPX73440.1 335 VFIGNLPSSFGERELLDHFGKFGEIESVKILSK-----KNIAFIHYLNIKDAIRVVQTLSS 390
                 8*******************************8.....*******************9976 PP

  == domain 3  score: 9.3 bits;  conditional E-value: 0.00027
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHH CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAek 54 
                 +f+gnL   v+ +e+ +l  ++Gp +++  +++     k ++fV+F +  dA++
  EPX73440.1 454 VFLGNLDAKVKGSEICDLI-HCGPLQDFHYIPE-----KHICFVTFVDIADAKA 501
                 6889999999999999986.79**********7.....**************97 PP

  == domain 4  score: 14.5 bits;  conditional E-value: 6.3e-06
                 ETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHH CS
       RRM_1   6 LppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedA 52 
                 ++ ++ ++eL+ +++++G+i+sik  ++      +++fV +++ ++ 
  EPX73440.1 550 VTDSLAKKELELILRQYGEIESIKYLKQ-----PNTGFVSYTNISNG 591
                 56678899*******************7.....*********98765 PP

>> Nup35_RRM_2  Nup53/35/40-type RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0   0.00014      0.49      16      49 ..     348     381 ..     341     383 .. 0.90
   2 ?    4.1   0.0     0.013        46      23      49 ..     473     499 ..     471     501 .. 0.84
   3 ?    2.0   0.0     0.059   2.1e+02      21      45 ..     563     587 ..     554     594 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00014
  Nup35_RRM_2  16 lVlehFasfGeIvkhyvpkevsvmyvkfesekda 49 
                  + l+hF  fGeI    + ++++++++ + + kda
   EPX73440.1 348 ELLDHFGKFGEIESVKILSKKNIAFIHYLNIKDA 381
                  5578**********99999*********999887 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.013
  Nup35_RRM_2  23 sfGeIvk.hyvpkevsvmyvkfesekda 49 
                  ++G+  + hy+p e+++ +v+f +  da
   EPX73440.1 473 HCGPLQDfHYIP-EKHICFVTFVDIADA 499
                  799999988888.9********887666 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.059
  Nup35_RRM_2  21 FasfGeIvkhyvpkevsvmyvkfes 45 
                  ++++GeI  + + k+ ++ +v + +
   EPX73440.1 563 LRQYGEIESIKYLKQPNTGFVSYTN 587
                  679******9999999*****9976 PP

>> RRM_5  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0   0.00048       1.7      39      91 ..     344     395 ..     316     401 .. 0.83
   2 !    5.2   0.0    0.0041        15      41      92 ..     556     606 ..     547     629 .. 0.79

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00048
       RRM_5  39 vnldklFnlfclYgnvervkflktkketalvqmgdasaveravqHLnnaklfg 91 
                 +   +l   f+ +g++e vk+l +kk+ a++   + +++ r vq L+  +++ 
  EPX73440.1 344 FGERELLDHFGKFGEIESVKIL-SKKNIAFIHYLNIKDAIRVVQTLSSDPVYH 395
                 5556788889***********9.6889******************99999985 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0041
       RRM_5  41 ldklFnlfclYgnvervkflktkketalvqmgdasaveravqHLnnaklfgk 92 
                  ++l  ++ +Yg++e +k+lk+ ++t +v   + s+  +a + L  ++ f k
  EPX73440.1 556 KKELELILRQYGEIESIKYLKQ-PNTGFVSYTNISNGMKAFHGLPLQPAFQK 606
                 566777899***********95.88889988888887777777766666665 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   5.1e-05      0.18       1      28 [.     332     359 ..     332     368 .. 0.94
   2 ?   -3.0   0.0       2.3   8.2e+03       1      28 [.     542     569 ..     542     582 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 5.1e-05
       RRM_7   1 srkvFvGGlPiDiteeelkatfkefgkv 28 
                 sr vF+G lP    e+el + f++fg++
  EPX73440.1 332 SRNVFIGNLPSSFGERELLDHFGKFGEI 359
                 899***********************86 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 2.3
       RRM_7   1 srkvFvGGlPiDiteeelkatfkefgkv 28 
                 sr v+   +   + ++el+  ++++g++
  EPX73440.1 542 SRNVYFSKVTDSLAKKELELILRQYGEI 569
                 6777777777788899999999999987 PP

>> RRM_3  RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0      0.91   3.3e+03      17      56 ..     348     387 ..     337     392 .. 0.79
   2 ?    9.7   0.0   0.00024      0.84       6      56 ..     547     597 ..     544     612 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.91
                 HHHHHCHCCS-ECEEEE-TTSSEEEEEESSHHHHHHHHHH CS
       RRM_3  17 dikellsklgevayvdyekgdkegevrFkedeeakkalek 56 
                 ++ + + k+ge++ v   + ++ + + + + ++a ++++ 
  EPX73440.1 348 ELLDHFGKFGEIESVKILSKKNIAFIHYLNIKDAIRVVQT 387
                 5667788999999999999999999999888888777765 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00024
                 EEE-SSS--HHHHHHHCHCCS-ECEEEE-TTSSEEEEEESSHHHHHHHHHH CS
       RRM_3   6 lsGlnkelsredikellsklgevayvdyekgdkegevrFkedeeakkalek 56 
                 +s +++ l ++++  +l+++ge++ + y k  ++g v + + +++ ka++ 
  EPX73440.1 547 FSKVTDSLAKKELELILRQYGEIESIKYLKQPNTGFVSYTNISNGMKAFHG 597
                 55577889999*******************************999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (701 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       821  (0.0457917); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.62u 0.30s 00:00:00.92 Elapsed: 00:00:00.45
# Mc/sec: 4730.36
//
Query:       EPX73441.1  [L=257]
Description: 20S proteasome component alpha 4 Pre6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.9e-56  190.6   0.0    2.3e-56  190.3   0.0    1.1  1  Proteasome      Proteasome subunit
      3e-12   46.0   0.2    8.5e-12   44.5   0.0    1.8  2  Proteasome_A_N  Proteasome subunit A N-terminal signature


Domain annotation for each model (and alignments):
>> Proteasome  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  190.3   0.0   2.6e-60   2.3e-56       1     189 [.      27     210 ..      27     211 .. 0.97

  Alignments for each domain:
  == domain 1  score: 190.3 bits;  conditional E-value: 2.6e-60
                 HHHS-EEEEEEETTEEEEEEEEEEEETTEEEESSSSTSEEEEETTEEEEEEESHHHHHHHHHHHHHHHHHHHHHHSSGTCHHHHHHHHHHHHHHHHHHC CS
  Proteasome   1 vkkGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigvafaGlaaDartlvrraraeaqlyrlrygrpipverlvarvaaklqaytqrs 99 
                 v++Gtt+v+++gk+++v++++k++    kl+++ +++Ki  id+h+++afaGl aDar+l+++ar+eaq+++l+  +p+++e ++++va  +q+ytq +
  EPX73441.1  27 VRRGTTAVALRGKECIVIGVEKKNV--PKLQNPGSFQKIALIDNHVCLAFAGLNADARILIDKARVEAQSHKLNLADPVSLESITRYVAGVQQKYTQAG 123
                 679**********************..************************************************************************ PP

                 TTTTTSEEEEEEEEE.TTTEEEEEEEETTSEEEEESSEEEESTTHHHHHHHHHHHHSTTBSHHHHHHHHHHHHHHHHHHBTTSCSSEEEEE CS
  Proteasome 100 grrpfgvslliagvd.eeggpeLyqidpsGsyieekdavaiGsgseaaktalekeykedltleeavelavkalkealerdklsgknievav 189
                 g+rpfgvs+liag+d + + p++yq++p+G y ++k a aiG  s+ a+++lek++kedl+++e ++l +++l e+++   +s +n+e+a+
  EPX73441.1 124 GVRPFGVSTLIAGFDvNSNIPRIYQTEPAGVYNAWK-ASAIGRSSKGAREFLEKNWKEDLSRDESIRLTINSLLEVVQ---TSAGNVELAI 210
                 ***************66778***************8.*****99**********************************...8899999998 PP

>> Proteasome_A_N  Proteasome subunit A N-terminal signature
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.5   0.0   9.5e-16   8.5e-12       1      23 []       4      26 ..       4      26 .. 0.99
   2 ?   -1.8   0.0      0.29   2.6e+03      13      18 ..     145     150 ..     145     150 .. 0.89

  Alignments for each domain:
  == domain 1  score: 44.5 bits;  conditional E-value: 9.5e-16
  Proteasome_A_N  1 YDrslttFSPdGRLfQVEYAmkA 23
                    YDr+l++FSPdGRL+QVEY ++A
      EPX73441.1  4 YDRALSVFSPDGRLLQVEYGQEA 26
                    **********************9 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.29
  Proteasome_A_N  13 RLfQVE 18 
                     R++Q E
      EPX73441.1 145 RIYQTE 150
                     9***87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       609  (0.0339673); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1849.53
//
Query:       EPX73442.1  [L=509]
Description: homoserine O-acetyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.1e-48  164.7   0.1    9.5e-48  163.1   0.1    1.8  1  Abhydrolase_1  alpha/beta hydrolase fold
  ------ inclusion threshold ------
      0.056   14.0   0.0      0.077   13.6   0.0    1.3  1  Abhydrolase_6  Alpha/beta hydrolase family


Domain annotation for each model (and alignments):
>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.1   0.1   1.1e-51   9.5e-48       1     244 [.     120     382 ..     120     466 .. 0.95

  Alignments for each domain:
  == domain 1  score: 163.1 bits;  conditional E-value: 1.1e-51
                    SEEEEE-STTTCGGG..........GTTGHHHHHHHHT..TSEEEEEEETTSTTSSSTTTGB.........CHHSHHHHHHHHH.HH..HHHCTTS CS
  Abhydrolase_1   1 pvlvilhGlpgssdv..........waerglapaLakd..gfdvillDlrGvgySspapacin........ddygtasvaddld.ri..ldalgdd 73 
                    ++++++ Gl +ss+           w+e++++p+ + d  +f +i+ + +G++y+s++p++i+        +++++++v+d+++ +i  ld+l++d
     EPX73442.1 120 NAILLHTGLSASSHAhshpdnpqpgWWEQFIGPGKDLDtnKFYIICCNILGSCYGSTGPSSIDpgdgkhyaTRFPIITVNDMVRtQIllLDHLKID 215
                    689*******************************999999********************************************98899******* PP

                    SEE.EEEETHHHHHHHHHHHHHGGGEEEEEEESE....CSSCCHHHHHHHHHHHHHHCHHCHHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHH CS
  Abhydrolase_1  74 klt.lvGhSmGGmialayaaeyperVkalvllga....idpaaslieaqrqqaksfpdffdgyaadcarnpagplladelaaleqrhrlvdalkfp 164
                    kl+  +G S+GGm++la+ a++p+r ++++++++    ++++++l+ +qrq+++++p +++g+++d+ ++++g++la+e+a++ +r+        p
     EPX73442.1 216 KLHaSIGSSLGGMQSLAFGALAPHRTARIASISGgarsHPYSIALRFTQRQILMNDPQWNRGFYYDGIPPHTGMKLAREVATISYRSG-------P 304
                    ****************************************************************************************.......* PP

                    CHHHCCHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHCTHHHHSEEEEEEE....TTCSSSCH.HHHHHHHHCHTSEEEEE CS
  Abhydrolase_1 165 dkskrfpssgsdnasslatgalksieqwpttdsaklllrlrelknvlaptlvisg....tsDplvpp.kaledlaqllpkkrlvv 244
                    ++++rf + + ++a+ +a++ ++ ie++ +++  k++l+++       ++l++++    ++D+ +++ k l +++++ ++++l++
     EPX73442.1 305 EWEQRFSTRRANPAVPPAMCPDFLIETYLDHAGEKFCLQYDP------NSLLYISkamdMHDMTASNqKLLAENRKK-NQHKLEK 382
                    ******************************************......****9999999********5555555555.5545544 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   8.6e-06     0.077      44     156 ..     195     318 ..     122     416 .. 0.60

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 8.6e-06
                    S--HHH.CHHHHHHHCCTT..TTSEEE.EEETCHHHHHHHHHHCC..EEEEES-..----TTT.S----TTHHHHHHTT-CCCCHCCH....S-HS CS
  Abhydrolase_6  44 pldled.ladlaalldelaagggpvvl.vGHSlGGalalaaaplalvvgvlldppptalpagl.laaalelllallallrllawlsre....plpr 132
                      +++d ++++  lld+l+   ++ ++ +G SlGG+ +la+++la++++  +++   +++a+  +  ++  + ++  l  +++w ++     ++p+
     EPX73442.1 195 IITVNDmVRTQILLLDHLK--IDKLHAsIGSSLGGMQSLAFGALAPHRTARIAS--ISGGARShPYSIALRFTQRQILMNDPQWNRGFyydgIPPH 286
                    3444555566678999997..8888555************99999777755555..3333333233333333333333333677754433332221 PP

                    ...CCCCHHHC.....CCCHCHCCCGHHHHCC CS
  Abhydrolase_6 133 ...lfladeda.....daawrarlarlaalla 156
                        + +++++      ++w +r+++ +a  a
     EPX73442.1 287 tgmKLAREVATisyrsGPEWEQRFSTRRANPA 318
                    22233333331333456666666666653333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (509 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       716  (0.0399353); expected 358.6 (0.02)
Passed bias filter:                      569  (0.0317363); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.41
# Mc/sec: 3755.26
//
Query:       EPX73443.1  [L=141]
Description: 60S ribosomal protein L25 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.1e-20   72.1  11.3    5.5e-20   71.3  11.3    1.4  1  Ribosomal_L23eN  Ribosomal protein L23, N-terminal domain
    1.9e-15   57.0   2.0    1.9e-15   57.0   2.0    2.4  2  Ribosomal_L23    Ribosomal protein L23


Domain annotation for each model (and alignments):
>> Ribosomal_L23eN  Ribosomal protein L23, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.3  11.3   6.1e-24   5.5e-20       3      51 .]       4      52 ..       2      52 .. 0.97

  Alignments for each domain:
  == domain 1  score: 71.3 bits;  conditional E-value: 6.1e-24
  Ribosomal_L23eN  3 akAlkAkKavlkGthshkkrKirtsttFhrPKTLrlsRaPKYpRkSiph 51
                     akA+ A+K v kG+h++  +K+rtsttF+rPKTL+l+R+PKY+RkS+ h
       EPX73443.1  4 AKAKGAQKTVQKGVHNKVAKKVRTSTTFRRPKTLQLPRKPKYARKSVAH 52
                     8*********************************************987 PP

>> Ribosomal_L23  Ribosomal protein L23
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.3      0.31   2.8e+03      47      54 ..      23      30 ..       5      51 .. 0.57
   2 !   57.0   2.0   2.1e-19   1.9e-15       1      75 [.      60     122 ..      60     134 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.31
                   EEEEEEEE CS
  Ribosomal_L23 47 ekVntlnv 54
                   +kV+t   
     EPX73443.1 23 KKVRTSTT 30
                   33444333 PP

  == domain 2  score: 57.0 bits;  conditional E-value: 2.1e-19
                    SSEEEE--SHHHHHHHTT.E.EEEEE-SS-THHHHHHHHHHHHT--EEEEEEEEE--EBESSSSSEEBE--EEEEE CS
  Ribosomal_L23   1 dvilkPvitEkstklaek.nkyvFeVakdanKleikkaveklFgVkVekVntlnvkgkkkrvgrkvgrrksyKkai 75 
                    ++il+P+ +E ++k+ e+ n++vF V++++nK  ik+av kl++V+  +Vntl++++ +k+             a+
     EPX73443.1  60 KIILNPLNSESAMKKIEDdNTLVFIVHMRSNKNTIKDAVRKLYDVEAVNVNTLIRPNGTKK-------------AF 122
                    69***************989***********************************996665.............33 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       647  (0.0360868); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 977.21
//
Query:       EPX73444.1  [L=513]
Description: hypothetical protein SOCG_02668 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (513 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       718  (0.0400469); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 3865.89
//
Query:       EPX73445.1  [L=615]
Description: exocyst complex subunit Exo70 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-49  169.1  10.7    1.4e-49  169.1  10.7    2.4  3  Exo70       Exo70 exocyst complex subunit
  ------ inclusion threshold ------
       0.69   10.0   2.8        2.1    8.4   0.1    2.6  2  Tricorn_C1  Tricorn protease C1 domain
          1    9.4   3.8        7.6    6.6   0.1    3.1  3  DUF730      Protein of unknown function (DUF730)
        3.8    7.5   5.5        1.6    8.8   0.1    3.1  4  DUF1664     Protein of unknown function (DUF1664)


Domain annotation for each model (and alignments):
>> Exo70  Exo70 exocyst complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   2.0     0.021        94     107     165 ..      57     123 ..      12     169 .. 0.62
   2 ?   -1.6   0.1      0.25   1.1e+03       7      74 ..     134     221 ..     128     228 .. 0.64
   3 !  169.1  10.7   3.2e-53   1.4e-49       3     375 ..     246     607 ..     244     608 .. 0.94

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.021
       Exo70 107 lkklsetakslleefeesikkd......ssk..spvppdggvheltrnvmnylrkLleykdtlssll 165
                 ++++s++++ +l+e+e     +      +++  ++  +d++++e ++ vm  lr L++y  +l+s  
  EPX73445.1  57 YNRVSSNIYDTLKEMEVLQVIHsnlpkiKAElnTSDKNDASITEKIQLVMKMLRVLARYYISLQSSP 123
                 5666666666666655544444335444222455555999999999999999999999877776543 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.25
       Exo70   7 yktavkvlfasErrlleqifge....................seseresvfaeiakesitellqllrefgeavakkskr.speklfklL 74 
                 +++a+   + +  +l+++++++                    +++e+ ++f+ ++++  +e+l  ++ + + ++++  + ++e+l+ lL
  EPX73445.1 134 VEIALSETCSRLSSLCQKVLQThaasslkktttildldqtwaFPTETLQQFMGLIQQFDNEVLYPIS-YSSDISSNYVKtKSECLVQLL 221
                 5566666666667777777776666666666666666666666677777777777777777777776.555455444344666666665 PP

  == domain 3  score: 169.1 bits;  conditional E-value: 3.2e-53
       Exo70   3 wikayktavkvlfasErrlleqifgeseseresvfaeiakesitellqllrefgeavakkskrspeklfklLdmyealsdllpeleslfsgeaksevka 101
                  i  y +a+ +++ +  + l q++   ++ +++++++i k++i+++ + ++++  a +++s  s e+ + +  ++ +++    +++  + +e+  ++ +
  EPX73445.1 246 EIGIYLIALARILSATASELLQLYD--TETSQALYQRIGKNVISTVSNSIHQCETAYEQQS--SLENHILF-PLIHCVKITEDYIQMNMPFED-VALFD 338
                 5777888999999999999999997..9******************************888..77777777.889999999999999999943.49*** PP

       Exo70 102 eleellkklsetakslleefeesikkdssk.spvppdggvheltrnvmnylrkLleykdtlssllkdlkdeswssasssqssssesssadgesllalfl 199
                  ++ ++k++++ + s+l+++ +   +  sk   + + +g++ ++r +m +l +L++ykd+   ll++ +d++w+++     +++  +s++ ++l ++++
  EPX73445.1 339 LVSGVRKEVEKIIISSLSNLYNGYCNS-SKpVAL-STNGISDIARGIMLFLTRLCQYKDSF-YLLESIGDWGWRHE----VTADLPQSTTARELAQNYI 430
                 ***************************.774666.9************************9.8899*******975....7777777777889****** PP

       Exo70 200 adlisaLesnLeakakl.ykdkslqgiFlmNNlhyilqkvkrselklllgddwlrkhekkikqyaksYeresWskvlslLkdeglts..sskklssske 295
                 +d++ + +++ e+ a++  + +  +gi l+N   y ++ + +se++ +l d+  ++ +++ ++y ++Y ++ W+++++++ d ++t+  +++++s +k+
  EPX73445.1 431 MDCLLSHLNSVEESANAiDTLTWKKGIILLNISVYFESACVESEIATYLDDEHYNNFSELSQKYSSMY-MDVWRQCSQNMLDATYTKakEKPNMS-TKD 527
                 *****************77999**********************************************.9***************9998889999.*** PP

       Exo70 296 keqikekfkkFnsaFeelvrkqkswkvpDpeLReeLrreikekvipaYrkFlerykevdftknpekyvkytpedlenlLn 375
                 +e+ kekf++Fn++   +v ++k  +  +p + + L +e+++ v+p+Y++F+++y  +dftk +eky+++t+ +l +++ 
  EPX73445.1 528 REATKEKFRNFNEQITSIVENHKESVRFEPSVAKFLLQEVRKTVLPLYQRFYDKYFTSDFTKYKEKYIRFTKAQLDSYIT 607
                 *****************************************************************************997 PP

>> Tricorn_C1  Tricorn protease C1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.1   0.00048       2.1       4      45 ..     494     544 ..     491     547 .. 0.89
   2 ?    0.8   0.3      0.12   5.4e+02      16      39 ..     575     597 ..     565     601 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00048
                 HHHHHHHHHHHHHHHSS-H.........HHHHHHHHHHHHHHHGGGGG--S CS
  Tricorn_C1   4 waqmfdeawrllrdkFydp.........dmhgvDWeavkerYepllprvat 45 
                 +  m+ ++wr++ ++  d+         +m+  D ea ke+++++ +++++
  EPX73445.1 494 YSSMYMDVWRQCSQNMLDAtytkakekpNMSTKDREATKEKFRNFNEQITS 544
                 678************88888888999999**************99888765 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.12
                 HHHSS-HHHHHHHHHHHHHHHHGG CS
  Tricorn_C1  16 rdkFydpdmhgvDWeavkerYepl 39 
                  ++Fyd+ +   D  ++ke+Y ++
  EPX73445.1 575 YQRFYDKYFT-SDFTKYKEKYIRF 597
                 5789999887.8999999999776 PP

>> DUF730  Protein of unknown function (DUF730)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0     0.071   3.2e+02      81     114 ..      13      46 ..       3      52 .. 0.79
   2 ?    6.6   0.1    0.0017       7.6      74     119 ..      75     120 ..      64     122 .. 0.88
   3 ?    0.2   0.2      0.16   7.3e+02      72     104 ..     513     545 ..     489     562 .. 0.74

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.071
      DUF730  81 temkkdleaakkrvesqaekiflmekkfetlekk 114
                  ++++ l +  k +e  ++ +++m+k++ +le+ 
  EPX73445.1  13 ENFQRSLGSVAKDIEEASDILMFMDKRLGVLEES 46 
                 467888999999****************999975 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0017
      DUF730  74 dkikeektemkkdleaakkrvesqaekiflmekkfetlekkyesln 119
                 ++i+ +  ++k +l++++k+  s +eki l+ k + +l + y sl+
  EPX73445.1  75 QVIHSNLPKIKAELNTSDKNDASITEKIQLVMKMLRVLARYYISLQ 120
                 5677788899******************************999985 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.16
      DUF730  72 efdkikeektemkkdleaakkrvesqaekiflm 104
                  + k ke+ +   kd ea+k++  +  e+i  +
  EPX73445.1 513 TYTKAKEKPNMSTKDREATKEKFRNFNEQITSI 545
                 46788888888899*****99999999988643 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.1   0.00035       1.6      63     124 .]      14      75 ..       7      75 .. 0.93
   2 ?   -2.3   0.0      0.98   4.4e+03      84     113 ..      83     112 ..      77     121 .. 0.65
   3 ?   -2.5   0.0       1.1   5.1e+03      65      65 ..     164     164 ..     128     209 .. 0.51
   4 ?   -1.6   0.1      0.56   2.5e+03      34      55 ..     530     551 ..     506     558 .. 0.64

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00035
     DUF1664  63 hLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeaveglesklerieekQ 124
                 ++++ + +v k ++e ++i   +++ +  ++e +s i+ dv++ +++ +++  +l+++e  Q
  EPX73445.1  14 NFQRSLGSVAKDIEEASDILMFMDKRLGVLEESTSVIRGDVTNYNRVSSNIYDTLKEMEVLQ 75 
                 67788999*************************************************99765 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.98
     DUF1664  84 eikeevtevredlseigedvesvkeavegl 113
                 +ik+e+++  ++ ++i e+++ v ++ + l
  EPX73445.1  83 KIKAELNTSDKNDASITEKIQLVMKMLRVL 112
                 456666666666666666666666666655 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 1.1
     DUF1664  65 s 65 
                 +
  EPX73445.1 164 T 164
                 1 PP

  == domain 4  score: -1.6 bits;  conditional E-value: 0.56
     DUF1664  34 vTkrslsdavesvskqleqvse 55 
                 +Tk  ++++ e++++ +e+ +e
  EPX73445.1 530 ATKEKFRNFNEQITSIVENHKE 551
                 4555555555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (615 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1419  (0.0791455); expected 358.6 (0.02)
Passed bias filter:                      550  (0.0306766); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.64u 0.28s 00:00:00.92 Elapsed: 00:00:00.44
# Mc/sec: 4196.21
//
Query:       EPX73446.1  [L=477]
Description: G2/M B-type cyclin Cdc13 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-46  156.1   0.2    3.4e-45  152.9   0.1    2.4  2  Cyclin_N    Cyclin, N-terminal domain
    1.4e-34  118.7   0.1      3e-34  117.7   0.1    1.6  1  Cyclin_C    Cyclin, C-terminal domain
  ------ inclusion threshold ------
        1.2    9.4   6.1        2.3    8.5   0.7    3.1  3  PSII_Pbs27  Photosystem II Pbs27


Domain annotation for each model (and alignments):
>> Cyclin_N  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.9   0.1   5.7e-49   3.4e-45       1     126 [.     201     326 ..     201     327 .. 0.99
   2 ?    0.0   0.0      0.11   6.7e+02      77     123 ..     374     417 ..     333     419 .. 0.83

  Alignments for each domain:
  == domain 1  score: 152.9 bits;  conditional E-value: 5.7e-49
                 HHHHHHHHHHCHTS-STTCTTCTSSS-HHHHHHHHHHHHHHHHHTT--TTHHHHHHHHHHHHHHHS---CCCHHHHHHHHHHHHHHHHSSS---HHHHH CS
    Cyclin_N   1 dilknlieqelkflpkpdyldqqpelnpemRailidwlvevaekfkltpetlflavnyldRflskksvpkdklqlvgatcLllAaKveeisppkledlv 99 
                 di+++l + e++++p+p y+d+q+el ++mR il dw++ev+++f+l petlflavn++dRfls + ++  klqlvg+++L++A+K+ee+ +p+++++v
  EPX73446.1 201 DIFQYLNQLEIETMPSPTYMDRQRELAWKMRGILTDWIIEVHSRFRLLPETLFLAVNIIDRFLSLRVCSLGKLQLVGIAALFIASKYEEVMCPSVQNFV 299
                 89************************************************************************************************* PP

                 HHTTTSS-HHHHHHHHHHHHHHTTT-- CS
    Cyclin_N 100 yitdeafteeeilemErliLetLnfdl 126
                 y++d++++ee+il++Er+iL++L+f+l
  EPX73446.1 300 YMADGSYDEEDILQAERYILRVLEFNL 326
                 **************************9 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.11
                 HHHHHHHHHHHHSSS---HHHHHHHTTTSS-HHHHHHHHHHHHHHTT CS
    Cyclin_N  77 gatcLllAaKveeisppkledlvyitdeafteeeilemErliLetLn 123
                 +a++++lA  +     +  ++lv++++  ++e e++ + ++++++L+
  EPX73446.1 374 CAAAMYLAREMLGR-GVWNRNLVHYSG--YEEHELISVVKKMINYLQ 417
                 57788888888666.688999999976..999999999999999886 PP

>> Cyclin_C  Cyclin, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.7   0.1     5e-38     3e-34       1     117 [.     329     441 ..     329     443 .. 0.96

  Alignments for each domain:
  == domain 1  score: 117.7 bits;  conditional E-value: 5e-38
                 --HHHHHHHHHCCSSHT.-HCCHHCHHCHHHHHHCSCCHCCS-HHHHHHHHHHHCCHHHHS--S-HHHHHHC---HHHHHHHHHHHHHHHHHHHGSS-- CS
    Cyclin_C   1 ptplsFlrrflkaadasedselrtlakylleltlldydflsyppSliAaaalllarstlnspewtetlehytgyskedlkpcvelilellssapssklq 99 
                 p p++Flrr++ka+ +  d+++rt+akyl+e++lld+++l yppS+  aaa++lar +l+++ w+++l+hy+gy++++l  +v+++ ++l  ++  +++
  EPX73446.1 329 PNPMNFLRRISKADYY--DIQTRTVAKYLVEIALLDHRLLPYPPSQQCAAAMYLAREMLGRGVWNRNLVHYSGYEEHELISVVKKMINYL--QKPVRHE 423
                 89***********666..99**********************************************************************..56779** PP

                 HHCCCCTCGGGCCCGGS- CS
    Cyclin_C 100 avrrkyssskfhkvstls 117
                 a+++ky+s+kf+k+s ++
  EPX73446.1 424 AFFKKYASKKFMKASLFV 441
                 *************99876 PP

>> PSII_Pbs27  Photosystem II Pbs27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0     0.056   3.3e+02      95     125 ..      45      73 ..      39      81 .. 0.76
   2 ?    8.5   0.7   0.00038       2.3      22      83 ..     127     181 ..      94     184 .. 0.77
   3 ?   -0.4   0.1      0.23   1.4e+03      49      87 ..     406     444 ..     398     453 .. 0.70

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.056
  PSII_Pbs27  95 geesYaelekAinsLaghYsknGpsaplpee 125
                 +++s  +   A++ ++++ sk + +apl  +
  EPX73446.1  45 TSTSN-KKRHALDDVSNFHSKEA-NAPLASK 73 
                 55554.5567*************.9999876 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.00038
  PSII_Pbs27  22 gaiaslfdpnektkadkalpkaYlkdarevvktlresleldkkddakreraakaakesirey 83 
                 ++ +   +p++     ++  ++Y+k+  +++k+l++ +e+ +  ++ +++ a+a k++++++
  EPX73446.1 127 DMAT--TKPVT-----ELHAETYAKENEALSKKLKKDTEERIPLQEIMRQNAAAEKTEVQDW 181
                 2222..22333.....44889*********************99999**************9 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.23
  PSII_Pbs27  49 revvktlresleldkkddakreraakaakesireyvskY 87 
                 + vvk++ ++l+  ++ +a +++ a++   + + +v+++
  EPX73446.1 406 ISVVKKMINYLQKPVRHEAFFKKYASKKFMKASLFVRDW 444
                 679999999999999766666666655555556666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (477 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       866  (0.0483016); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.47
# Mc/sec: 3053.36
//
Query:       EPX73447.1  [L=617]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.074   13.0   0.2       0.17   11.8   0.2    1.5  1  TMCCDC2   Transmembrane and coiled-coil domain-containing pro


Domain annotation for each model (and alignments):
>> TMCCDC2  Transmembrane and coiled-coil domain-containing protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.2   9.4e-06      0.17      62     124 ..     290     353 ..     286     374 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 9.4e-06
     TMCCDC2  62 lwkrsirsiqkillfvitlyklykkGsdlfqal.lanpegaelkiqdnknlllslglqekilkk 124
                 +   ++ si ++ l++ ++++  k G  lf+ l + ++e+++ +iqd +++ll  + +   l+ 
  EPX73447.1 290 IKNYTLASIFNVYLYIGVIFMRVKVGVPLFERLkIGENETNTNSIQDASKILLEKQTKSSFLRY 353
                 5667899*************************9456777888899*******987777666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (617 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       783  (0.0436723); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.29s 00:00:00.88 Elapsed: 00:00:00.45
# Mc/sec: 4087.58
//
Query:       EPX73448.1  [L=881]
Description: BRCT domain-containing protein Brc1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.4e-33  115.1   5.8    2.7e-08   34.1   0.0    6.5  6  BRCT           BRCA1 C Terminus (BRCT) domain
    2.3e-27   94.7   0.4    6.6e-15   54.8   0.1    5.4  5  PTCB-BRCT      twin BRCT domain
    4.9e-25   87.8   5.1    1.8e-07   31.4   0.0    6.9  7  BRCT_2         BRCT domain, a BRCA1 C-terminus domain
    8.8e-25   86.5   0.1    4.6e-20   71.4   0.0    4.1  4  RTT107_BRCT_5  Regulator of Ty1 transposition protein 107 BRC
    3.4e-14   52.9   0.0    2.2e-05   24.6   0.0    4.4  4  LIG3_BRCT      DNA ligase 3 BRCT domain
    1.2e-06   28.5   0.2      0.037   14.1   0.0    6.0  7  BRCT_3         BRCA1 C Terminus (BRCT) domain


Domain annotation for each model (and alignments):
>> BRCT  BRCA1 C Terminus (BRCT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   9.5e-06     0.028      10      79 .]      17      81 ..      10      81 .. 0.89
   2 !   21.7   0.0   6.6e-08    0.0002       2      79 .]      96     173 ..      95     173 .. 0.86
   3 !   18.0   0.0   9.7e-07    0.0029       4      78 ..     207     280 ..     205     281 .. 0.86
   4 !   34.1   0.0   9.1e-12   2.7e-08       3      78 ..     301     373 ..     299     374 .. 0.96
   5 !   17.4   0.0   1.4e-06    0.0043      38      79 .]     694     734 ..     672     734 .. 0.93
   6 !    6.2   0.0    0.0044        13       3      37 ..     772     813 ..     770     855 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 9.5e-06
                EEEEEESTSSHHHHHHHHHHHHTTCEE..ESSCSTTSSEEEESSSHSHHHHHHHHHHTTSEEEETHHHHHHH CS
        BRCT 10 kfvitgvldnftrdeleelikehGGkv..ttevskktthlvvgepesrslkylealklnipivheewlldci 79
                + v+     + + +++++l   +GG +   +++ k  th++  +    s  ++e  ++  ++v+ +w+ dci
  EPX73448.1 17 VAVL-----DADDSNIKKLFLQNGGNIlnYPYNWKLATHVIGNDF--NSPVVQEGARRSLRLVKTKWIEDCI 81
                4444.....7788999999999*****999999********9999..99**********************8 PP

  == domain 2  score: 21.7 bits;  conditional E-value: 6.6e-08
                 TTTTTTTEEEEEEESTSSHHHHHHHHHHHHTTCEEESSCSTTSSEEEESSS.HSHHHHHHHHHHTTSEEEETHHHHHHH CS
        BRCT   2 kellfhgckfvitgvldnftrdeleelikehGGkvttevskktthlvvgep.esrslkylealklnipivheewlldci 79 
                 ++l+f+g+     +  d f    + + ++ +GGk+t+ + k +th++  +    +  k+ e+ +  i+++h+ w+ldc+
  EPX73448.1  96 PYLIFKGICATT-CEIDPFLAFLIDDSLEVLGGKFTPVLIKSITHVFSFDGeGPKCRKVREKENADIKVIHPRWVLDCL 173
                 678889988888.88888888889999********************54443366777********************7 PP

  == domain 3  score: 18.0 bits;  conditional E-value: 9.7e-07
                 TTTTTEEEEE..EESTSSHHHHHHHHHHHHTTCEEESSCSTTSSEEEESSSHSHHHHHHHHHHTTSEEEETHHHHHH CS
        BRCT   4 llfhgckfvi..tgvldnftrdeleelikehGGkvttevskktthlvvgepesrslkylealklnipivheewlldc 78 
                 ++f+++kf++    +l++  ++ + ++++++G+ v    ++++t+ v     +++ ++  a +++ +i +++wll +
  EPX73448.1 207 NVFYNKKFFFasDLNLSTVAKQAIYKFARNLGADV---ADSTQTCDVFIGFQRETDEFRMASEQKATIATISWLLNS 280
                 89********99999999999999***********...5555555554455589********************987 PP

  == domain 4  score: 34.1 bits;  conditional E-value: 9.1e-12
                 TTTTTTEEEEEEESTSSHHHHHHHHHHHHTTCEEESSCSTTSSEEEESSSHSHHHHHHHHHHTTSEEEETHHHHHH CS
        BRCT   3 ellfhgckfvitgvldnftrdeleelikehGGkvttevskktthlvvgepesrslkylealklnipivheewlldc 78 
                  ++++g+++++ +++++  r++le+li   G+++t+ +++++++l++ ++   ++k+ +a+ ++ip v + wl+ +
  EPX73448.1 301 KKFLKGQTIAL-TNYTGKARTYLEKLIVASGASYTKNLKPTNSILIAASS--YGQKFGAAKVWKIPSVYHTWLFSS 373
                 689********.***********************************999..9********************976 PP

  == domain 5  score: 17.4 bits;  conditional E-value: 1.4e-06
                 SSCSTTSSEEEESSSHSHHHHHHHHHHTTSEEEETHHHHHHH CS
        BRCT  38 tevskktthlvvgepesrslkylealklnipivheewlldci 79 
                 t++ +k+thlv+    +r+ k+l a+ ++  +v+ ewl d+i
  EPX73448.1 694 TSNPSKCTHLVAPRI-LRTAKFLCAIPKGPQVVTMEWLQDSI 734
                 567789******999.************************97 PP

  == domain 6  score: 6.2 bits;  conditional E-value: 0.0044
                 TTTTTTEEEEE.EESTSSHHHHHHHHHHHHTTCEE......E CS
        BRCT   3 ellfhgckfvi.tgvldnftrdeleelikehGGkv......t 37 
                 ++l+++ ++++  ++    + +   +++k++GG++      +
  EPX73448.1 772 PTLLENYVIYLtAKTIAPANISAVTSIVKSNGGSCstinsfN 813
                 68999******8888999999999***********6654441 PP

>> PTCB-BRCT  twin BRCT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.3   0.0    0.0064        19      12      63 .]      23      76 ..      15      76 .. 0.83
   2 !   22.2   0.0   3.2e-08   9.7e-05      16      63 .]     118     168 ..     103     168 .. 0.84
   3 !   54.8   0.1   2.2e-18   6.6e-15       2      63 .]     308     369 ..     307     369 .. 0.98
   4 !    5.3   0.0    0.0063        19      33      63 .]     698     729 ..     691     729 .. 0.88
   5 ?   -1.1   0.0      0.63   1.9e+03      14      29 ..     793     808 ..     780     819 .. 0.79

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0064
                CHHHHHHHHHHTT-EEESSE..ETT-SEEEECSS-CHHHHHHHHCT-EEE-CHH CS
   PTCB-BRCT 12 drkslqklieamGaeyskdl..tksvTHLicksgeGekyekAkkwgipvVsveW 63
                d ++++kl  ++G+++       k  TH+i +++++   +   ++ +++V+ +W
  EPX73448.1 23 DDSNIKKLFLQNGGNILNYPynWKLATHVIGNDFNSPVVQEGARRSLRLVKTKW 76
                56789**********98877645778********99988888888888888888 PP

  == domain 2  score: 22.2 bits;  conditional E-value: 3.2e-08
                 HHHHHHHTT-EEESSEETT-SEEEECSS-CHHHHHHHHCT...-EEE-CHH CS
   PTCB-BRCT  16 lqklieamGaeyskdltksvTHLicksgeGekyekAkkwg...ipvVsveW 63 
                 + + +e +G++++  l ks+TH+ + +geG k++k ++     i+v+ ++W
  EPX73448.1 118 IDDSLEVLGGKFTPVLIKSITHVFSFDGEGPKCRKVREKEnadIKVIHPRW 168
                 6677899****************************9874334699999999 PP

  == domain 3  score: 54.8 bits;  conditional E-value: 2.2e-18
                 EEEEECB-TTCHHHHHHHHHHTT-EEESSEETT-SEEEECSS-CHHHHHHHHCT-EEE-CHH CS
   PTCB-BRCT   2 vicvtgysgddrkslqklieamGaeyskdltksvTHLicksgeGekyekAkkwgipvVsveW 63 
                 +i +t+y+g++r++l+kli+a Ga+y+k+l+ ++  Li++s++G+k+ +Ak w+ip V + W
  EPX73448.1 308 TIALTNYTGKARTYLEKLIVASGASYTKNLKPTNSILIAASSYGQKFGAAKVWKIPSVYHTW 369
                 689**********************************************************9 PP

  == domain 4  score: 5.3 bits;  conditional E-value: 0.0063
                 TT-SEEEE.CSS-CHHHHHHHHCT-EEE-CHH CS
   PTCB-BRCT  33 ksvTHLic.ksgeGekyekAkkwgipvVsveW 63 
                  ++THL++ +  +  k+ +A   g +vV++eW
  EPX73448.1 698 SKCTHLVApRILRTAKFLCAIPKGPQVVTMEW 729
                 58******666789999999999999999999 PP

  == domain 5  score: -1.1 bits;  conditional E-value: 0.63
                 HHHHHHHHHTT-EEES CS
   PTCB-BRCT  14 kslqklieamGaeysk 29 
                 + ++ +++++G+++s+
  EPX73448.1 793 SAVTSIVKSNGGSCST 808
                 5678899******986 PP

>> BRCT_2  BRCT domain, a BRCA1 C-terminus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4   0.0   6.1e-11   1.8e-07      19      84 ..      22      92 ..      15      93 .. 0.85
   2 !   15.5   0.0   5.7e-06     0.017      30      85 .]     124     185 ..     118     185 .. 0.88
   3 !    7.9   0.1    0.0014       4.1       3      72 ..     207     280 ..     205     285 .. 0.88
   4 !    9.3   0.0    0.0005       1.5      16      83 ..     314     384 ..     303     386 .. 0.88
   5 ?   -2.6   0.1       2.5   7.6e+03      19      51 ..     401     430 ..     395     461 .. 0.58
   6 !   11.6   0.0   9.2e-05      0.28      39      85 .]     697     746 ..     661     746 .. 0.79
   7 !    7.2   0.1    0.0022       6.6       2      52 ..     772     833 ..     771     872 .. 0.64

  Alignments for each domain:
  == domain 1  score: 31.4 bits;  conditional E-value: 6.1e-11
      BRCT_2 19 psreklkklIeknGGevvetitsa..vyiviaesneee...laekrkrrvvspkyIkdCikkgkllpleny 84
                ++++ +kkl  +nGG++ + + +    ++vi +  ++    +  +r++r v++k+I+dCi k+ ll++ +y
  EPX73448.1 22 ADDSNIKKLFLQNGGNILNYPYNWklATHVIGNDFNSPvvqEGARRSLRLVKTKWIEDCIDKNALLDYAPY 92
                57899************8888443347788887777669988999***********************999 PP

  == domain 2  score: 15.5 bits;  conditional E-value: 5.7e-06
      BRCT_2  30 knGGevvetitsavyiviaesneee......laekrkrrvvspkyIkdCikkgkllplenyl 85 
                   GG+++ +  ++ ++v++   e        ++e+++ +v++p+++ dC+  g+ ++ ++yl
  EPX73448.1 124 VLGGKFTPVLIKSITHVFSFDGEGPkcrkvrEKENADIKVIHPRWVLDCLIHGRCIDQKPYL 185
                 56999999999999999999887779999999***********************9999996 PP

  == domain 3  score: 7.9 bits;  conditional E-value: 0.0014
      BRCT_2   3 klFeglrFYin.daeps.psreklkklIeknGGevvetitsavyiviaesneee..laekrkrrvvspkyIkdC 72 
                 ++F + +F+   d + s   ++ + k  ++ G  v ++ + +++++  +++++e  +a+++k+ + + +++  +
  EPX73448.1 207 NVFYNKKFFFAsDLNLStVAKQAIYKFARNLGADVADSTQTCDVFIGFQRETDEfrMASEQKATIATISWLLNS 280
                 7899999999875556668999********************9999999999999*999999999999999876 PP

  == domain 4  score: 9.3 bits;  conditional E-value: 0.0005
      BRCT_2  16 epspsreklkklIeknGGevvetitsavyiviaesneee...laekrkrrvvspkyIkdCikkgkllplen 83 
                 + ++ r  l+klI + G   +++ ++++ i+ia+s+  +   +a+  k ++v +++++ + ++ ++ p+++
  EPX73448.1 314 YTGKARTYLEKLIVASGASYTKNLKPTNSILIAASSYGQkfgAAKVWKIPSVYHTWLFSSFRSLSVEPYDD 384
                 5568999******************9999999999987799999999*************99888877776 PP

  == domain 5  score: -2.6 bits;  conditional E-value: 2.5
      BRCT_2  19 psreklkklIeknGGevvetitsavyiviaesn 51 
                 +  +kl ++I +  G  ++  ++   iv +++n
  EPX73448.1 401 KLESKLNSVIVDTEGSSCNGNEN---IVNTTTN 430
                 56677888888888877666632...2222222 PP

  == domain 6  score: 11.6 bits;  conditional E-value: 9.2e-05
      BRCT_2  39 itsavyiviaesneee....laekrkrrvvspkyIkdCikkgkllplenyl 85 
                 + s+ ++++a++   +     a  ++++vv+ ++++d+ik+    p +nyl
  EPX73448.1 697 P-SKCTHLVAPRILRTakflCAIPKGPQVVTMEWLQDSIKQRHPAPEDNYL 746
                 2.33456666665555888889999******************99999996 PP

  == domain 7  score: 7.2 bits;  conditional E-value: 0.0022
      BRCT_2   2 sklFeglrFYin.daepspsreklkklIeknGGev..........vetitsavyiviaesne 52 
                 ++l e++  Y+  +++  ++++ +++++++nGG +          +++ ++ ++i+i+ +++
  EPX73448.1 772 PTLLENYVIYLTaKTIAPANISAVTSIVKSNGGSCstinsfnkrlTKHLENGNIIIITCQED 833
                 67899999***95555559**************99554444433333334444444444443 PP

>> RTT107_BRCT_5  Regulator of Ty1 transposition protein 107 BRCT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.6   0.0    0.0047        14      76      99 ..      70      93 ..      65      94 .. 0.88
   2 ?    4.3   0.0     0.012        37      76      99 ..     162     185 ..     157     186 .. 0.89
   3 ?   -2.6   0.0       1.7     5e+03      40      57 ..     235     252 ..     225     279 .. 0.81
   4 !   71.4   0.0   1.5e-23   4.6e-20      11     100 .]     663     747 ..     653     747 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0047
                   EEE-CHHHHHHHHHTS---SGGGB CS
  RTT107_BRCT_5 76 kilspdfiedvLkkkklldleeyl 99
                    ++++++ied+++k+ lld  +y 
     EPX73448.1 70 RLVKTKWIEDCIDKNALLDYAPYS 93
                   6899**************999985 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.012
                    EEE-CHHHHHHHHHTS---SGGGB CS
  RTT107_BRCT_5  76 kilspdfiedvLkkkklldleeyl 99 
                    k+++p+++ d+L +++++d ++yl
     EPX73448.1 162 KVIHPRWVLDCLIHGRCIDQKPYL 185
                    89***************9999996 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 1.7
                    HHTTEEE-SGCCT-SEEE CS
  RTT107_BRCT_5  40 rklGikivqeakkcntli 57 
                    r+lG  + +++++c++ i
     EPX73448.1 235 RNLGADVADSTQTCDVFI 252
                    899999999999999887 PP

  == domain 4  score: 71.4 bits;  conditional E-value: 1.5e-23
                    SSXXX--EEEEESSS.TT..SSHHHHHHHHHTTEEE-SGCCT-SEEE-SS---SHHHHHHCCCTTEEE-CHHHHHHHHHTS---SGGGB- CS
  RTT107_BRCT_5  11 kskpevkiravlTgceeevnkedsdkkkLrklGikivqeakkcntliApkilRTeKFLksLskapkilspdfiedvLkkkklldleeyll 100
                    +s ++ +  +v+Tg+e      + + + L+k +i i+++++kc++l+Ap+ilRT+KFL++++k+p+++++++++d +k+++   +++yll
     EPX73448.1 663 SSASRERRYVVITGYET-----KPSSDDLKKSNIIITSNPSKCTHLVAPRILRTAKFLCAIPKGPQVVTMEWLQDSIKQRHPAPEDNYLL 747
                    455566678999***64.....577889***************************************************99999999975 PP

>> LIG3_BRCT  DNA ligase 3 BRCT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.0   7.5e-09   2.2e-05       2      79 ..       9      84 ..       8      86 .. 0.89
   2 !    8.9   0.0    0.0006       1.8      41      76 ..     135     173 ..     126     178 .. 0.85
   3 !   13.7   0.0   1.9e-05     0.057      36      79 ..     693     737 ..     660     739 .. 0.81
   4 ?   -2.0   0.0       1.5   4.4e+03      22      50 ..     774     802 ..     758     815 .. 0.83

  Alignments for each domain:
  == domain 1  score: 24.6 bits;  conditional E-value: 7.5e-09
   LIG3_BRCT  2 LpdiFtgvklfipksvedykklrRYfiAydGdlvk.eekekeaTHvvvskkeeskkekeksknakaVtaewiwesIkkr 79
                L+ +F+ v+ ++  + ++ kkl   f+ ++G++++ +++ k aTHv+ ++ +  + +     + + V  +wi ++I k+
  EPX73448.1  9 LNGLFKSVVAVLDADDSNIKKL---FLQNGGNILNyPYNWKLATHVIGNDFNSPVVQEGARRSLRLVKTKWIEDCIDKN 84
                7789999999999999999999...*********868999*********887778888889999************986 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0006
   LIG3_BRCT  41 keaTHvvvskke...eskkekeksknakaVtaewiwesI 76 
                 k++THv + + e     k + +++ + k+++++w+ ++ 
  EPX73448.1 135 KSITHVFSFDGEgpkCRKVREKENADIKVIHPRWVLDCL 173
                 789****997778877888899999*************7 PP

  == domain 3  score: 13.7 bits;  conditional E-value: 1.9e-05
   LIG3_BRCT  36 keekekeaTHvvvskke.eskkekeksknakaVtaewiwesIkkr 79 
                   ++ +++TH v++      k   +  k+ ++Vt ew+ +sIk+r
  EPX73448.1 693 ITSNPSKCTHLVAPRILrTAKFLCAIPKGPQVVTMEWLQDSIKQR 737
                 4466777******96544666678999****************98 PP

  == domain 4  score: -2.0 bits;  conditional E-value: 1.5
   LIG3_BRCT  22 klrRYfiAydGdlvkeekekeaTHvvvsk 50 
                  l+ Y+i   ++ + +++ +++T +v+s+
  EPX73448.1 774 LLENYVIYLTAKTIAPANISAVTSIVKSN 802
                 67889999999999999999999999985 PP

>> BRCT_3  BRCA1 C Terminus (BRCT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.019        58      52      90 ..      51      89 ..      17      98 .. 0.83
   2 !   14.1   0.0   1.2e-05     0.037      64      89 ..     155     180 ..     139     184 .. 0.85
   3 ?    0.1   0.0      0.28   8.5e+02      57      86 ..     257     285 ..     221     289 .. 0.72
   4 ?   -1.5   0.0      0.88   2.6e+03       2      42 ..     303     343 ..     302     381 .. 0.75
   5 ?   -0.9   0.0      0.57   1.7e+03      21      54 ..     594     627 ..     587     650 .. 0.72
   6 ?   -1.5   0.0      0.89   2.7e+03      69      82 ..     721     734 ..     679     744 .. 0.79
   7 ?   -0.9   0.0      0.58   1.7e+03       3      27 ..     820     843 ..     775     866 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.019
      BRCT_3 52 vtdsscpeevlkkaeqlkipvvSteWviQsLIegevlky 90
                v  +++ + v+++ ++ ++++v t+W+  ++ +  +l+y
  EPX73448.1 51 VIGNDFNSPVVQEGARRSLRLVKTKWIEDCIDKNALLDY 89
                55666777788888888*************988877776 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 1.2e-05
      BRCT_3  64 kaeqlkipvvSteWviQsLIegevlk 89 
                 + e+ +i+v+   Wv+ +LI+g++++
  EPX73448.1 155 EKENADIKVIHPRWVLDCLIHGRCID 180
                 456779*****************987 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.28
      BRCT_3  57 cpeevlkkaeqlkipvvSteWviQsLIege 86 
                  ++e    a+++k+++ +  W++ s + g+
  EPX73448.1 257 ETDEF-RMASEQKATIATISWLLNSFVLGS 285
                 44444.4677889***********998775 PP

  == domain 4  score: -1.5 bits;  conditional E-value: 0.88
      BRCT_3   2 ilkdlkillvseqkefeelWseilklaGaavvkkekseaee 42 
                 +lk+  i l++   + ++  ++++ + Ga+  k+ k +++ 
  EPX73448.1 303 FLKGQTIALTNYTGKARTYLEKLIVASGASYTKNLKPTNSI 343
                 56777788888777888888899999999888888776654 PP

  == domain 5  score: -0.9 bits;  conditional E-value: 0.57
      BRCT_3  21 WseilklaGaavvkkekseaee....islgkldvvvtd 54 
                 Ws++ ++a    +++e+s++++    ++l++    + +
  EPX73448.1 594 WSQVKDNANTVALTQERSRSKRksasMALSM----LQN 627
                 9999999999999999999888444433333....333 PP

  == domain 6  score: -1.5 bits;  conditional E-value: 0.89
      BRCT_3  69 kipvvSteWviQsL 82 
                 + +vv+ eW+  s+
  EPX73448.1 721 GPQVVTMEWLQDSI 734
                 45799999997776 PP

  == domain 7  score: -0.9 bits;  conditional E-value: 0.58
      BRCT_3   3 lkdlkillvseqkefeelWseilkl 27 
                 l++ +i++++ q++ +++W++il+ 
  EPX73448.1 820 LENGNIIIITCQED-KHIWKDILSS 843
                 55666777777765.7889888865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (881 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       827  (0.0461264); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.79u 0.32s 00:00:01.11 Elapsed: 00:00:00.54
# Mc/sec: 4937.75
//
Query:       EPX73449.1  [L=351]
Description: horsetail movement protein Hrs1/Mcp6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.22   11.7   1.3       0.37   11.0   0.3    2.0  2  Tox-HDC   Toxin with a H, D/N and C signature
       0.76   10.3  24.4         11    6.6   0.6    4.2  3  ZapB      Cell division protein ZapB
          3    8.3   8.0        2.9    8.4   0.4    3.0  2  DUF4140   N-terminal domain of unknown function (DUF4140)


Domain annotation for each model (and alignments):
>> Tox-HDC  Toxin with a H, D/N and C signature
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.3   6.2e-05      0.37      60     105 ..     134     178 ..      90     183 .. 0.85
   2 ?   -2.1   0.0       0.7   4.2e+03      53      97 ..     252     295 ..     240     304 .. 0.65

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 6.2e-05
     Tox-HDC  60 lefkflmeDlatlkkavkgrtvrvvnlanldeeelnniLrnankni 105
                  + k l++D++tl++++k   vr+ nl++  +  l++ L n  +++
  EPX73449.1 134 TKQKLLKQDITTLEENYKACFVRIGNLEHE-NSTLKTSLCNQSRDV 178
                 57899**********************985.567888888877665 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.7
     Tox-HDC  53 kregelrlefkflmeDlatlkkavkgrtvrvvn.lanldeeelnni 97 
                 +r + lrl+  f  +Dl++ ++++++  +  ++ l++ + +  + +
  EPX73449.1 252 TRSRILRLQESF--SDLESQHDSFRQICDSLRQkLKTDSSKTKQRL 295
                 577777777766..67777778888777766532555444444444 PP

>> ZapB  Cell division protein ZapB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1      0.52   3.1e+03      20      37 ..      79      96 ..      74      99 .. 0.73
   2 ?    4.5  14.4     0.008        48      17      46 ..      98     141 ..      92     241 .. 0.82
   3 ?    6.6   0.6    0.0018        11      21      65 ..     250     298 ..     245     304 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.52
        ZapB 20 itlLqmeieeLkeeneel 37
                i+ L+ +++e ++ ne+ 
  EPX73449.1 79 IKNLKLQLDEERRLNEQF 96
                677777777777777775 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.008
        ZapB  17 idtitlLqmeieeLkeeneelkeenrele..............e 46 
                 i+t+ +Lq  ie+L+ en  l ++n+el               +
  EPX73449.1  98 INTMVKLQRTIEQLENENHHLLNQNEELLvlknehetkqkllkQ 141
                 88999***********************9777665433333331 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.0018
        ZapB  21 tlLqmeieeLkeeneelkeenrele....eeneqlkeereawqerlkkL 65 
                 t+ + +i +L+e  + l+++ +  +    +  ++lk++ +++++rl kL
  EPX73449.1 250 TETRSRILRLQESFSDLESQHDSFRqicdSLRQKLKTDSSKTKQRLLKL 298
                 5667899999999999999999999888888899999999999999876 PP

>> DUF4140  N-terminal domain of unknown function (DUF4140)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   1.0      0.02   1.2e+02      46      88 ..      76     122 ..      58     133 .. 0.75
   2 ?    8.4   0.4   0.00048       2.9      43      92 ..     207     274 ..     199     286 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.02
     DUF4140  46 aatildvqvervpnreaeee....elkalraeleeledelaaledel 88 
                 ++ i +++++ +++r+  e+     + +l++++e+le e  +l ++ 
  EPX73449.1  76 SLEIKNLKLQLDEERRLNEQfkinTMVKLQRTIEQLENENHHLLNQN 122
                 45677777777777777777777569999999999999887776655 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.00048
     DUF4140  43 gagaatildvqvervpnreaeee..................elkalraeleeledelaaledelaaae 92 
                 g+ ++++ dv+++++ +re +++                  ++ ++r+++ +l++  ++le++ ++ +
  EPX73449.1 207 GHHNVRLRDVKLQEDSQRERKRDrehvescenksqadtffpRVTETRSRILRLQESFSDLESQHDSFR 274
                 678899********99999999999***************9677777777777777777766666544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (351 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1741  (0.0971052); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.71u 0.33s 00:00:01.04 Elapsed: 00:00:00.57
# Mc/sec: 1851.00
//
Query:       EPX73450.1  [L=407]
Description: 19S proteasome regulatory subunit Rpn7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.2e-49  165.5   0.7    1.9e-48  164.4   0.7    1.6  1  RPN7       26S proteasome subunit RPN7
    8.2e-17   61.6   0.8    4.4e-16   59.3   0.0    2.6  4  PCI        PCI domain
  ------ inclusion threshold ------
      0.089   11.9   4.3       0.14   11.3   4.3    1.2  1  Tmemb_cc2  Predicted transmembrane and coiled-coil 2 protein
       0.11   12.3   0.0       0.25   11.1   0.0    1.7  1  HTH_DeoR   DeoR-like helix-turn-helix domain
       0.18   11.8   2.2        3.3    7.7   0.1    3.2  3  Blo-t-5    Mite allergen Blo t 5


Domain annotation for each model (and alignments):
>> RPN7  26S proteasome subunit RPN7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.4   0.7   5.4e-52   1.9e-48       1     173 [.      75     247 ..      75     248 .. 0.99

  Alignments for each domain:
  == domain 1  score: 164.4 bits;  conditional E-value: 5.4e-52
                 -HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHCT-HHHHHHHHHTCCCC--SHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHH CS
        RPN7   1 DekwveelrkknekeleeLdaelkdakenlgkeeirrakldlaehYlkigdleeAlkaysrireyctslkhkidmllnlirvaiffndwdlvskyleka 99 
                 De++++++ ++n+k++ee d+ l+da+e  g+ ei +a+  +a ++++i+d+   ++++ +i++  t +++kid+l+  ir+a+ + d++ vs  lek+
  EPX73450.1  75 DESFLNQMIQENNKRIEEYDKALEDAQELNGEHEILEAMRGKAYYFVDICDRVRGVQLCDEIYDRATLTGMKIDVLFLKIRLAYVYSDMKTVSHLLEKM 173
                 8999*********************************************************************************************** PP

                 HCSSS---.HHHHHHHHHHHHHHHHHTT-HHHHHHHHCTS-GGGT.TTT--HHHHHHHHHHHHHHH--HHHHHH CS
        RPN7 100 kellekggdwerknrlkvyeGlallairkfkeAaellldilstftskellsyedlavyavlcalatldRkdLka 173
                 k l+ekggdwerknrlk+y+G++l++ir+f+ Aa+llld+ stf+s+ell+y d++ yav+++ ++ldR+  k+
  EPX73450.1 174 KPLIEKGGDWERKNRLKAYQGIYLMSIRDFSAAADLLLDCMSTFSSTELLPYYDVVRYAVISGAISLDRVHVKS 247
                 *********************************************************************98875 PP

>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1      0.85   3.1e+03      31      56 ..      35      60 ..      16      87 .. 0.60
   2 ?   -1.7   0.1       1.2   4.3e+03      16      16 ..      84      84 ..      41     127 .. 0.67
   3 ?   -3.1   0.0       3.2   1.1e+04      10      31 ..     158     178 ..     153     202 .. 0.70
   4 !   59.3   0.0   1.2e-19   4.4e-16       3     104 ..     268     370 ..     266     371 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.85
                HHTTHHHHHHHHHHHHHHHHHHHHHH CS
         PCI 31 addglaqllesLekkvrerllrqvsk 56
                 +++ ++ le L   +re+ l  +++
  EPX73450.1 35 LERKHEKALETLFSAIRENHLAPLYQ 60
                34444444555555555555544444 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.2
                H CS
         PCI 16 s 16
                +
  EPX73450.1 84 Q 84
                2 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 3.2
                 HHHTSHHHHHHHHHHHHHHHHH CS
         PCI  10 lrsgnlsgfseelkdleeella 31 
                 +++++++ +s++l+++ ++l++
  EPX73450.1 158 YVYSDMKTVSHLLEKM-KPLIE 178
                 6677777777777777.44444 PP

  == domain 4  score: 59.3 bits;  conditional E-value: 1.2e-19
                 HHHHHHHHHHTSHHHHHHHHHHH.HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCESEEEHHHHHHHHTSSHHHHHHHHHHHHHTTSSSEEEETTTTE CS
         PCI   3 ysdllkalrsgnlsgfseelkdl.eeelladdglaqllesLekkvrerllrqvskiyssislerlaklldlsvdevEkilvklIrdgeirakidqesgi 100
                 +++++++l+ ++++gf ++l+d+ +++l  d++l  ++ ++++++r++++ q+ ++ys +s+e++a ++++sv+ +++ l+++I  ++i++ id++ g+
  EPX73450.1 268 LEACINSLYLCDYAGFFRTLADVeQNHLKCDQFLVAHYRYYVREMRRHAYSQLLESYSALSIESMAAAFGVSVEYIDRDLASFIPGNKINCVIDRVRGV 366
                 67899******************6666777888888*************************************************************** PP

                 EEEC CS
         PCI 101 vvfk 104
                 v+ +
  EPX73450.1 367 VETN 370
                 9876 PP

>> Tmemb_cc2  Predicted transmembrane and coiled-coil 2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   4.3   3.9e-05      0.14     210     281 ..      33     105 ..       8     114 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 3.9e-05
   Tmemb_cc2 210 ksaesesqeklekileelqeik.eeqerleeelerlkeqlkkelkllkqaLqeeryryerLEeqlndlteLhq 281
                 +  e+++++ le+++++++e + +   +  +e+e  k++++++ ++l+q++qe+  r+e+  + l d+ eL+ 
  EPX73450.1  33 SFLERKHEKALETLFSAIRENHlAPLYQYVCEYEGTKSKIDQDESFLNQMIQENNKRIEEYDKALEDAQELNG 105
                 4556778889999999998754266799999****************************************73 PP

>> HTH_DeoR  DeoR-like helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   6.9e-05      0.25       5      36 ..     317     348 ..     313     370 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 6.9e-05
    HTH_DeoR   5 ilellkqqgklsveelvellgvSeaTiRRDLn 36 
                   +ll++   ls+e  ++ +gvS + i RDL+
  EPX73450.1 317 YSQLLESYSALSIESMAAAFGVSVEYIDRDLA 348
                 568999999*********************97 PP

>> Blo-t-5  Mite allergen Blo t 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.1   0.00091       3.3      47      80 ..       7      40 ..       2      49 .. 0.88
   2 ?    1.6   0.1     0.074   2.6e+02      32      59 ..      52      79 ..      41      99 .. 0.73
   3 ?   -0.6   0.0      0.36   1.3e+03      91     113 ..     378     400 ..     369     402 .. 0.86

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.00091
                HH--SSHHHHHHHHHHHHHHHHHHHHHHHHHHTT CS
     Blo-t-5 47 ktkskelkeqilreltialnfiegakgflerelk 80
                 tk   +k++++ +lti++++ e ++ fler  +
  EPX73450.1  7 PTKTMSEKARVISDLTISQAIYELSNSFLERKHE 40
                5888999***********************9765 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.074
                HHHHHHHHHHHHHHHHH--SSHHHHHHH CS
     Blo-t-5 32 ekallklseqvkelektkskelkeqilr 59
                e+ l+ l + v e+e tksk  +++ + 
  EPX73450.1 52 ENHLAPLYQYVCEYEGTKSKIDQDESFL 79
                7788889999999999999977765443 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.36
                 HHHHHHHHHHHHHHHHHHHHHHH CS
     Blo-t-5  91 nfeaalatgkvLlkdLkelekkv 113
                  + ++++ g+vLl +L++ +  v
  EPX73450.1 378 QYQEVVKQGDVLLNKLQKYQATV 400
                 58899999********9988766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (407 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1202  (0.0670422); expected 358.6 (0.02)
Passed bias filter:                      761  (0.0424452); expected 358.6 (0.02)
Passed Vit filter:                        83  (0.00462937); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.74u 0.35s 00:00:01.08 Elapsed: 00:00:00.55
# Mc/sec: 2248.08
//
Query:       EPX73451.1  [L=514]
Description: alanine aminotransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.2e-35  122.5   0.0      4e-35  121.7   0.0    1.3  1  Aminotran_1_2  Aminotransferase class I and II


Domain annotation for each model (and alignments):
>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.7   0.0   2.2e-39     4e-35      22     362 ..     126     504 ..     118     504 .. 0.83

  Alignments for each domain:
  == domain 1  score: 121.7 bits;  conditional E-value: 2.2e-39
                    HHHHHHHHHHHHHTSTTST-BTTHHHHHHHHHHHHHCTCTTCHTTGGEGEEEESHHHHHHHHHHHHHHHTTT-EEEEEESS-THHHHHHHHTTSEE CS
  Aminotran_1_2  22 evakaekegalaggtlneygpidglpeleealakflgrseklklkreaavvvgsGagaliealifllklnpgdeilvpdptyasyknilrlsggev 117
                    +v++++k  +  +g++  y++++g p +++ +a++++++ + +  ++ ++ ++sGa++++ ++++ll    ++   +p+p y+ y     l +g+ 
     EPX73451.1 126 DVVERAKLLLKGTGSVGAYSDSQGIPIVRKHVAEYIQERDNYPCHPD-NIYLTSGATQGAKLIMTLLITGSSEGAMLPSPQYPLYGALMDLLHGKS 220
                    566666666778899**********************99********.*******************6666677*********************8 PP

                    EEEEBEETTTTEE-HHHHHHHHTTHHCTTETEEEEEEESS-TTT--B--HHHHHHHHHHHHHTTEEEEEEETTTTCBSSSS..HTHHH.HGGSTTS CS
  Aminotran_1_2 118 vryplyseedfhldlealeealkeapegnkktkvilvesphNPtGtvatleeleklldlakkynlllfvDeaYagfvfgsl..davat.ranveee 210
                    v y l++++++++d+e++++a+++ +++   +++ ++ +p NPtGt +++e +e++l++ak+++l++++De+Y+  vf+++  ++ ++ + +  +e
     EPX73451.1 221 VLYYLSEKDEWNVDVEQFKQAYEDESKKGTNVRLCVFINPGNPTGTCMSEECIEEMLRFAKRKGLVVISDEVYQNNVFKKKftSFRKVlCDLETRE 316
                    8888899*******************9999*************************************************66655555565555555 PP

                    TT.......EEEEEESSS.TTSSGGG-EEEEEEEH...HHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHH........HHHHHHHHHHHHHHH CS
  Aminotran_1_2 211 pn.......llivgslsK.afGlaGeRvGyilgna...avvsqlrklsrpflsssllqaavaaalsdallkqs........eleemrqrlqkrrke 287
                    p+       l++ +s+sK  fG  G R Gyi +      v++ + kl++  +   ++ ++++  l  +++  +        e+e+  + ++k+ + 
     EPX73451.1 317 PDsdwdkvsLICINSVSKgQFGECGQRGGYIDIMNvpsFVKDLILKLATIDICAPVTGQLLVDLLVRPPKAGEpsyklysqEIENIHKDMEKQCQI 412
                    558899999*********669**********88555776666677777766664555555555555555555555555555677777777777777 PP

                    HHHHHHHS.TEEEECCSCSSEEEEEETHHCHHHHHHH...............HHHTCTEEEEEGGGGTS...TTEEEEEC.TTS-HHHHHHHHHH CS
  Aminotran_1_2 288 lrdeLael.glkvlasqsgmflltdlsaetakelskk...............Lleevgvyvtpgtsftv...pgrlRitv.Aglteeeleelvea 362
                    l+++ ++  ++++ +++++m+l   ++    ++l ++               +le+ g+ ++pg+         ++Rit+ A + +e++e+lvea
     EPX73451.1 413 LYEATKRMkYVTCQEPHGAMYLHPNIRLP--QKLVREanesniepdelyclrILERTGICLVPGSGLCQkenDYHVRITFlAKG-SEYVERLVEA 504
                    77776666****************99988..556665778888899999999***********887766877779*****5555.5788888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (514 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       657  (0.0366445); expected 358.6 (0.02)
Passed bias filter:                      579  (0.032294); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.29s 00:00:00.87 Elapsed: 00:00:00.45
# Mc/sec: 3412.97
//
Query:       EPX73452.1  [L=238]
Description: peroxisomal biogenesis factor 11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-52  176.9   3.0    4.4e-52  176.7   3.0    1.0  1  PEX11     Peroxisomal biogenesis factor 11 (PEX11)


Domain annotation for each model (and alignments):
>> PEX11  Peroxisomal biogenesis factor 11 (PEX11)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  176.7   3.0   2.5e-56   4.4e-52       2     223 .]      11     236 ..      10     236 .. 0.92

  Alignments for each domain:
  == domain 1  score: 176.7 bits;  conditional E-value: 2.5e-56
       PEX11   2 dklvkflaqtqgrDKllRalqYasrllayllerkgsskelvkklkklesqfslsRKllRlgkflehlqaaa.klld.nkle.....dpvlrllavlrnl 93 
                 ++++++l+++++rDK +R+lq++++lla+ l+ +gss e+v+k+ +lesq+s++RKl+ +gk+++ l +    +l+ +  +     +++l  ++++r l
  EPX73452.1  11 AHVLRMLNSMSARDKSFRTLQFVAKLLAWRLYYNGSSLESVNKWDSLESQISFARKLFSIGKVFDYLSKSYfGTLQvK--NpisssEAALPSIQLTRDL 107
                 699****************************************************************65431344433..135789************* PP

       PEX11  94 gyalYlllDhvlwlkklgllkvknakklsrlssrfwlfglvlslvrdlyelrllqekekklkkekkekeereeeklaavlkkrpallldlvknllDlli 192
                 ++++Y +++ + wl+k++l+k++n+k +s+ls++f +++lv+s+++ +y+ ++ +e+ k+ +++  +++ + e++++ + k++ +++   v+n+lD+li
  EPX73452.1 108 AFTGYSAMELIGWLQKTKLIKCPNHKFVSTLSKQFLAAALVSSCFAGVYNYQKVSEQLKSIQASD-SGKTKHEASVESLIKEKHDVVYFAVQNALDALI 205
                 ************************************************************99864.444444444799********************* PP

       PEX11 193 alnelgilklsdgvvGlaGliSSllgllqlw 223
                 +l+el+ilkl++gvv++ G+++Sl+gl+++w
  EPX73452.1 206 PLAELDILKLDEGVVAMTGITTSLMGLYKTW 236
                 *****************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       675  (0.0376485); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.36s 00:00:01.01 Elapsed: 00:00:00.59
# Mc/sec: 1207.36
//
Query:       EPX73453.1  [L=865]
Description: ATP-dependent DNA helicase Rhp16b [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-76  256.8   1.7    3.7e-76  256.1   1.7    1.3  1  SNF2_N      SNF2 family N-terminal domain
    1.1e-17   64.4   0.0    2.6e-16   59.9   0.0    2.4  2  Helicase_C  Helicase conserved C-terminal domain
    8.2e-08   32.4   0.3    3.3e-07   30.5   0.0    2.2  2  ResIII      Type III restriction enzyme, res subunit
    2.1e-05   24.4   0.0      8e-05   22.5   0.0    2.0  1  DEAD        DEAD/DEAH box helicase


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  256.1   1.7   8.2e-80   3.7e-76       1     349 [.     254     589 ..     254     590 .. 0.87

  Alignments for each domain:
  == domain 1  score: 256.1 bits;  conditional E-value: 8.2e-80
                 HHHHHHHHH.......................................HHHHHTT--EEE---TTS--HHHHHHHHH...HHTTTS---.......S-. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx. RF
      SNF2_N   1 yQkeavkwmlkReqnlqdleaalrkllktldgekiyvnpatgevveesaeakqsvrGGiLaDemGLGKTvqvlalilaqrakeekdkekkrkdtlagp. 98 
                 +Q+++++w+ +Re+ ++d e   +                   ++++  e+++++ GGiLaD+mGLGKT+q+++lil +  +ee  +  ++k+   +p 
  EPX73453.1 254 HQIQGLRWLKRRENDDHDDEENYT-------------------TIKKTSEKENKSYGGILADDMGLGKTIQTISLILSHPCHEELLETIHNKGFSFKPc 333
                 9********888888886664433...................5667789999***************************9999999887777766666 PP

                 ..EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH-----------------EEEE-HHHHHHHT............TTS-S-S-SEEEES-GGGT CS
                 ..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  99 ..tLivvPaslldqWeneierhvsssalrvlvyggqkkmkkkntkvapklladydvvittYdvlsreaelq......kkrsvlkqvewkrvvlDEghtl 189
                   tL+++P sl++qWe+e+++  +   l+ lvy+g       n+k+  +  +dydv+ittY++l +e++ +      k+   l +  w+rv+lDE+ht+
  EPX73453.1 334 rsTLVIAPLSLIKQWEEELHSKSN---LKALVYHGA------NRKTYLNSINDYDVLITTYQTLVSENAPEkkdescKSTLSLFSFLWWRVILDEAHTI 423
                 66****************987655...556699996......45677899***************9996669999988888999999************ PP

                 --TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHHHHHHH-TTTT--HHHHHHHTHHHHH.HHHHHHHHHHHTT-STTEE---GGGT.....--.... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxx.....xx.... RF
      SNF2_N 190 knstskaaeavskLstsnrwiltGTPiqnsledlygLlkfLreepfgekqtfdkllqrpie.aqaekgrsrLlqllqrlmlrrakkdv.....ek.... 278
                 kn++sk++  +++L++ nrw+ltGTP+qn+l ++++L+kfLr++p+++  t++++++rp++  + +  ++rL+  l+ +mlrr+kk +     +     
  EPX73453.1 424 KNKASKTSVSCCSLESINRWCLTGTPLQNNLDEIFSLVKFLRIQPLNDSSTWKEQITRPVTqGKGQLAIERLRAFLSVIMLRRTKKILqessgKLgdgg 522
                 *************************************************************445567899******************87655115556 PP

                 ..S---EEEEEEEEE--HHHHHHHH....................HHHHHH-HHH-HHHHHHHHHHHHH---X CS
                 ..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 279 ..nlPpkteeiiflklskverksYnrllevlrkkalakllkrseaalkssskskekilelllelrqacnhpql 349
                   +lP++++e i +++s+ e+ +Y+  le++ +++++ + k  e + + ++     +l lll+lrqacnhp+l
  EPX73453.1 523 lmKLPKRIVEKISCEFSEREKDFYH-SLEKKSENTMSEFIKTGELNRNYTN-----VLCLLLRLRQACNHPKL 589
                 669**********************.7777777777777777665555555.....***************98 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0     0.073   3.3e+02      27      73 ..     346     384 ..     317     390 .. 0.81
   2 !   59.9   0.0   5.8e-20   2.6e-16      13     111 .]     702     802 ..     683     802 .. 0.89

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.073
                 HHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEES CS
  Helicase_C  27 drlekvklllekkgikvavlhgelpqnereeileqfnkgesdvLiat 73 
                 ++ e  + l++k+++k++v+hg     +r+  l++ n  ++dvLi+t
  EPX73453.1 346 KQWE--EELHSKSNLKALVYHG----ANRKTYLNSIN--DYDVLITT 384
                 3343..67778889********....89999999995..59999998 PP

  == domain 2  score: 59.9 bits;  conditional E-value: 5.8e-20
                 TTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH.TTSSS.EEEESGGGTSSSTSTTESEEEESSSSSSHHHHHHHHTTSSS CS
  Helicase_C  13 eeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfn.kgesd.vLiatdvaerGidipkvnlVinfdlprnvtsyiqriGRtgR 109
                 ++  gk++if+++++ l+ ++  l  ++ik+++++g++++  ree+l++ + + +++ +L + + ++ G++++++n Vi  dl++n++   q+i+R++R
  EPX73453.1 702 RAPPGKTIIFSQFTTFLDVLESHLIASKIKFVRYDGKMSNPAREESLRKLRdDSDVQvLLCSLKCGALGLNLTCANRVILSDLWWNPAIEEQAIDRVHR 800
                 66789**********9976444445779***********************778888677888************************************ PP

                 TT CS
  Helicase_C 110 ag 111
                 +g
  EPX73453.1 801 IG 802
                 97 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.5   0.0   7.3e-11   3.3e-07       4     153 ..     251     432 ..     248     451 .. 0.66
   2 ?   -2.0   0.0       0.7   3.1e+03      21      40 ..     816     844 ..     790     851 .. 0.63

  Alignments for each domain:
  == domain 1  score: 30.5 bits;  conditional E-value: 7.3e-11
                 E-HHHHHHHHHHT.........................TTSEEEEEESTTSTHHHHHHHHHHHH-S.....................-EEEEESSHHHH CS
      ResIII   4 lreyQeeaienlleklks...................krdkrglikmaTGtGKTlvaaklierllkkgkee................kflflvprksll 67 
                 l ++Q++ ++ l+  +++                   ++   g+++   G GKT+  ++li +     +ee                 +l+++p +sl+
  EPX73453.1 251 LLPHQIQGLRWLKR-RENddhddeenyttikktsekeNKSYGGILADDMGLGKTIQTISLILSHPC--HEElletihnkgfsfkpcrSTLVIAP-LSLI 345
                 56666666655542.22234555555555666666556666999***********99999865332..22233447777*******55555555.99** PP

                 HHHHHHGGGGTGG....GEEEESSS-B--.......-SEEEEEHHHHHHTH........HHHTTT-S......EEEEETGGGTTS.TTTHHH CS
      ResIII  68 eqtleefkkflseaykeigkkvsgdkkkakekdstnkkilvttiqsldadseeeeeeseellrdrfd......viiiDEaHrlgakkswrei 153
                 +q++ee+ + ++ +      +++g ++k + +++++ ++l+tt+q+l +++  e +++e+ +++ ++       +i DEaH ++ k+s +++
  EPX73453.1 346 KQWEEELHSKSNLK----ALVYHGANRKTYLNSINDYDVLITTYQTLVSENAPE-KKDESCKSTLSLfsflwwRVILDEAHTIKNKASKTSV 432
                 *****998877665....4678888888888899***************99443.3333333333334578999*********997544444 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.7
                 ...........TTSEEEEEESTTSTHHHH CS
      ResIII  21 s.........krdkrglikmaTGtGKTlv 40 
                           +++kr++ + a G GK+ v
  EPX73453.1 816 GtieeriltlQEEKRLIAEGALGDGKSKV 844
                 03344444556788888888888888765 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   1.8e-08     8e-05      22     139 ..     297     429 ..     280     449 .. 0.77

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 1.8e-08
                 STTSSHHHH.....HHHHHHHHHHHS......TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCSEEEEEHHHHH CS
                 xxxxxxxxx.....xxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  22 eTGsGKTla.....flipvlqivyet......kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvdivvgtpgrld 109
                 + G GKT        + p+ ++++et        k+   +l+++P+ +L++q  ++l +  +   l++ l+++g +++  l+ + n++d++++t + l+
  EPX73453.1 297 DMGLGKTIQtisliLSHPCHEELLETihnkgfSFKPCRSTLVIAPL-SLIKQWEEELHSKSN---LKA-LVYHGANRKTYLNSI-NDYDVLITTYQTLV 389
                 6689999872222244445555555588877756667899*****8.6*********88887...555.58999**********.************** PP

                 HHH......HCTSSHCTTEEE....EEEETHHHHHHTTTH CS
                 xxx......xxxxxxxxxxxx....xxxxxxxxxxxxxxx RF
        DEAD 110 dll......stgklnlsqvrf....lVlDEadrlldqgfs 139
                 +        ++ k +ls ++f    ++lDEa+++ ++  +
  EPX73453.1 390 SENapekkdESCKSTLSLFSFlwwrVILDEAHTIKNKASK 429
                 *6668875522333467677766789*******9988554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (865 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       591  (0.0329634); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.76u 0.30s 00:00:01.06 Elapsed: 00:00:00.49
# Mc/sec: 5273.62
//
Query:       EPX73454.1  [L=794]
Description: nucleoporin Nup107 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   1.4e-174  582.2   5.8   1.7e-174  581.9   5.8    1.0  1  Nup84_Nup100  Nuclear pore protein 84 / 107
  ------ inclusion threshold ------
       0.11   12.5   1.5       0.32   11.0   0.1    2.1  2  DUF2532       Protein of unknown function (DUF2532)


Domain annotation for each model (and alignments):
>> Nup84_Nup100  Nuclear pore protein 84 / 107
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  581.9   5.8  1.8e-178  1.7e-174       2     724 ..     104     775 ..     103     780 .. 0.93

  Alignments for each domain:
  == domain 1  score: 581.9 bits;  conditional E-value: 1.8e-178
                   HHHHHHHHHHHHHHHHHHHHHSS-TTT......---SSTTS-HHHHHHHHHHH-HHHHHHHHHHHHHHHT-------SS--S......STTHHHHHC CS
  Nup84_Nup100   2 enlelEaktWdLlerLysdrlssasekseeeeellelhpyssekelveellkkdselrelqivldWLeenakepeeeegeddelearahkwenTles 98 
                   + + lE +tWdL++r+ys+r s       +++++++ h +ss ++l+ee+++k + + e+++v +WL+++  ++++ e +        + w +T+e+
    EPX73454.1 104 NHWGLELRTWDLIQRIYSFRNS-------AQDQSISSHMFSSIAVLEEEFYSKYPAAFENHLVFNWLRDSPVQEPDIEIRG-------NRWFYTREN 186
                   68*******************5.......78899*************************************5555555554.......9******** PP

                   .SSHS...................HHSTTHHHHSGGGS-HHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHTT-HHHHHHHHTTSB-B-TTTSGGGT CS
  Nup84_Nup100  99 ikqkkrlrgvaassskekeeqlVtelDpDaplRqgrkLdpkDeederallkaifellRaGkleeaielCketgqlwraaiLeGlklyhdpnideeld 195
                   ik++ r+++  + s ++k+e+ V++lDpDa +R++r+Ld++D++++r++++  f+l RaG++e  ++lC+++g++wr+a+L+G  +y++++ide+l 
    EPX73454.1 187 IKKNSRTHS-KF-SLEKKDESNVSNLDPDADIRDERRLDERDDNYDRQFIRVAFSLYRAGDFEGLLDLCRKSGNYWRSASLQGAFEYRNSVIDEGLH 281
                   *98887764.33.455567778************************************************************************998 PP

                   T-SS-BSBTTHHHHHHHHHHHHHTSSS-HHHHHHHHHHHTS---H.HHT-SHHHHHHHHHHHHHHHHHHHHHHH............TTSS-GGG--S CS
  Nup84_Nup100 196 ekeevegnksralWkrtcyklsknknldeyeraiyglLsGdlesvlkvcksWedhLwaylnalleeqveqelrelvkkkseseelpeeklsseelvl 292
                     +e+ gnk+++lW+rtc++l+knk++d yera+yg+L+Gdlesvl+vc+sWed Lway+n++ +++++ +l +         ++p+++l+  +   
    EPX73454.1 282 --SETLGNKRKELWRRTCFALTKNKRTDAYERALYGALCGDLESVLNVCTSWEDALWAYYNSMNQYHLDVYLSDK-------IPQPDTHLPPID--- 366
                   ..8***********************************************************************6.......556666666664... PP

                   -----.--H.HHHHHHHHHH....SHHHHHSCCHHHHHHHHCS-HHHHHHHHHHTTHH-----------TTSHHHHHHHHHHHHHHHHH...ST.TS CS
  Nup84_Nup100 293 alpkp.ass.eeilnllsslsnervreeaeeplriiqaaiIlddvdsllesladalskaakkdesenelleepdllRflaHlilflrllgksepesk 387
                      +    s e i+++l++   e+vr+ a++plr +qa+iIl++vd+l++  +++l+ ++ ++++ + +l++p++lR+++Hl+lf+r+ g++     
    EPX73454.1 367 ---SGiGLSpEVIFEALDQFPLEEVRTSAAHPLRRLQAYIILNQVDKLFTLAHQQLEAVRAGSTEGILELTSPSSLRIMVHLLLFMRIAGIH----- 455
                   ...22233459*************************************************9****************************996..... PP

                   S-HHHHHHHHHHHHHHHHHTT-GGGHHHHHTTGGGGGG-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX. CS
  Nup84_Nup100 388 eeeeakeniitaYislLreagkyeliplYvsfLpeeravevyskfLesitdkeeRekqLklakklgldveailkrtvervieeteseyepseeidie 484
                   +++  +++ii++Yi+lL++++k+ l+plY+ fL+++ ++e+y++fL  i+d + R +qL+lakk++ld+++ + + v+ ++e+ +   e+s ei+  
    EPX73454.1 456 VDAYISDSIIQSYIELLASSKKNSLVPLYIPFLSDHIQYEAYARFLNLIEDGNPRLEQLRLAKKFELDIDRAALMSVSLAFEKFADDAEHSIEINL- 551
                   89999999******************************************************************************8887777777. PP

                   ........XXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXXXXXXXXX CS
  Nup84_Nup100 485 keeelsedesevteeDlklirsleWllfedelyeealeqsnalirrFLlngklaaakelfkrlnpkdlikeydleeledeleeskdeleeeteeaar 581
                        ++ +++v   + + i++leWl +   + +++l ++n  +r+FL +g l++a  l+ rl p ++++ ++++e++        ++++++ ++a 
    EPX73454.1 552 -----KSLDEPVPLVHTRFISTLEWL-IITCQSDDLLVYANCAFRYFLSRGELNSAYLLYTRL-PAETLDVLTTSEIA--------ADNSSKVQTAY 633
                   .....55566****************.89**********************************.*****999996644........58999****** PP

                   XXXXXXXXXXXXXXXXXXXXXXXXXXX........XXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXX...XXXX.X...XXXXXXXXXXXXXX CS
  Nup84_Nup100 582 eyleyealiealdaleewkkllsnskpk.kkkqyeseklkewkqklkelvkqakeliknvLkfgWLvdlte...keeeeerkeeleelRqlyiPeli 674
                   e+++y+al++a+   eew+kl+++   + + +++ s ++kewk++l  +++++++l++++L+ ++L ++t    ++ee+e  ++l+++R++y+Pe+i
    EPX73454.1 634 EFMNYRALCRAFHVHEEWNKLMNEPILNdTSSTKASVAYKEWKKSLTLTSRRCIKLFTELLRANFLHPSTMelnEDEEKELCNKLYRIRNIYVPEII 730
                   ***********************976666778888999********************************98744444466689************* PP

                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Nup84_Nup100 675 leLhsvlvsartllsenlkealeLanvVAdeesklyevFsksgrlkellq 724
                   l+Lh v+        e+++ ++ Lan+VA e+ kly++  +sgr++e+  
    EPX73454.1 731 LNLHGVYFHN-----EDYNGCFALANEVAGEDLKLYHCLLESGRIEEYAA 775
                   **********.....********************************976 PP

>> DUF2532  Protein of unknown function (DUF2532)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   3.6e-05      0.32      82     119 ..      59      97 ..      52     117 .. 0.83
   2 ?   -0.5   0.1      0.13   1.1e+03      53      72 ..     179     198 ..     173     210 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 3.6e-05
     DUF2532  82 lsdfsmqflekkseinsvetlisgflkfcednfq.tsks 119
                 +  f+  fl +k ++ s e l++ f k+ce+++  +sk 
  EPX73454.1  59 FESFANTFLANKDDLFSSEGLLTSFYKLCEEKYSkASKE 97 
                 5679999************************98514554 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.13
     DUF2532  53 klffseqqikkenkihekyk 72 
                 + f++ ++ikk+ + h k+ 
  EPX73454.1 179 RWFYTRENIKKNSRTHSKFS 198
                 67899999999999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (794 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       542  (0.0302304); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.71u 0.27s 00:00:00.98 Elapsed: 00:00:00.47
# Mc/sec: 5082.35
//
Query:       EPX73455.1  [L=427]
Description: branched chain amino acid aminotransferase Eca39 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.5e-29  100.8   0.0    1.3e-28  100.4   0.0    1.2  1  Aminotran_4  Amino-transferase class IV


Domain annotation for each model (and alignments):
>> Aminotran_4  Amino-transferase class IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.4   0.0     7e-33   1.3e-28       2     223 .]     129     380 ..     128     380 .. 0.88

  Alignments for each domain:
  == domain 1  score: 100.4 bits;  conditional E-value: 7e-33
  Aminotran_4   2 lfEtmrvy.....ngei..ffldeHleRLrksaellglelpfdeeelrkileelleannsen.......grlrllvsrgggglgaatsepsvavyvsa 85 
                  +fE++++y        +  f+ ++++eR+  +  ++   + fd++e++++++++++ +  ++       ++lr++ +++++ lg  + + ++++yv+a
   EPX73455.1 129 CFEGLKAYkddkgV--PrlFRPNKNAERMLSTGTRI-SLPAFDTKEWSEAIRKFVATESRWVpdkrgfsLYLRPTFIGTDAALG-VHHCENAMIYVIA 222
                  8*******986333..36599************888.799**************************99999*************.88888999***** PP

  Aminotran_4  86 lppgpeseke...lplvtssd.vrrdapsplpgaKtlnyldnvlarreakergadevl.lvdedgnvtEgstsNvfivk.....ggelitPplssgiL 173
                  +p gp++      ++l+ s   vr+++  +  +    ny+++vl ++ea+e+g+ + l l+ e+ +vtE++t+N f v       +e+it+pl++ iL
   EPX73455.1 223 SPVGPYYSSGfkaIRLCCSEGaVRAWPGGTGQYKLGGNYAPSVLPAAEAAEKGFAQILwLYGEEDYVTEVGTMNCFTVWinkngEKEIITAPLDGMIL 320
                  **********9997766666505555555555555677*****************9998***************976666799999************ PP

  Aminotran_4 174 pGitrrallelakal....gleveereitlkdle......eadeafltntlrgvlpvrsi 223
                  pG+tr+++l++a+++    g++v e+++++k++       +  e+f  +t++ v pv++i
   EPX73455.1 321 PGVTRDSILDIARERlvpqGWKVTEGKYSMKEVAqaskegRLLEVFGAGTAALVSPVKAI 380
                  **********************************4444444459*************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (427 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       381  (0.0212505); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 2946.78
//
Query:       EPX73456.1  [L=113]
Description: nuclear membrane organization protein Apq12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.7e-13   48.0  12.4    1.2e-12   47.5  12.4    1.2  1  Apq12     Nuclear pore assembly and biogenesis
  ------ inclusion threshold ------
      0.047   12.5   2.0      0.054   12.2   2.0    1.0  1  DUF2207   Predicted membrane protein (DUF2207)


Domain annotation for each model (and alignments):
>> Apq12  Nuclear pore assembly and biogenesis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.5  12.4   1.4e-16   1.2e-12       2      53 ..      59     110 ..      58     111 .. 0.97

  Alignments for each domain:
  == domain 1  score: 47.5 bits;  conditional E-value: 1.4e-16
       Apq12   2 PdlvsilllllilyvslkildrarRvvlfwvrllvrlvfwlavvlvgayvyn 53 
                 P+l++il+l+l+ly+sl i++ra+R+ l ++r+l  + f+l++v+vg+y+++
  EPX73456.1  59 PSLINILTLILVLYISLIIVNRATRIALALFRTLATISFFLLMVCVGVYWFL 110
                 99************************************************97 PP

>> DUF2207  Predicted membrane protein (DUF2207)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   2.0   6.1e-06     0.054     349     429 ..      23     109 ..       6     112 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 6.1e-06
     DUF2207 349 kakkfkkalkkwksavkkkergyfdkkgkkklkklsalglgliilglilillallllvll......lvfllilllillliaiivlll 429
                  ++++ ++++++ +++++ e+ +f++  k+k+  +   ++ ++ l+l+l + ++++  ++      +  l+ ++++ll+++++v+++
  EPX73456.1  23 QPDQILQKVEEVSKNIEQYESSFFKSLYKRKQPFSLPSLINILTLILVLYISLIIVNRATrialalFRTLATISFFLLMVCVGVYWF 109
                 678888999999999999999999999888877777777666666666666666655555788877777777777777777777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1375  (0.0766914); expected 358.6 (0.02)
Passed bias filter:                      680  (0.0379274); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.28s 00:00:00.72 Elapsed: 00:00:00.44
# Mc/sec: 777.75
//
Query:       EPX73457.1  [L=410]
Description: argininosuccinate synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.1e-147  492.3   0.0   1.3e-147  492.2   0.0    1.0  1  Arginosuc_synth  Arginosuccinate synthase
     0.0044   16.6   0.0     0.0068   15.9   0.0    1.3  1  QueC             Queuosine biosynthesis protein QueC


Domain annotation for each model (and alignments):
>> Arginosuc_synth  Arginosuccinate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  492.2   0.0  1.5e-151  1.3e-147       1     385 [.       9     401 ..       9     404 .. 0.98

  Alignments for each domain:
  == domain 1  score: 492.2 bits;  conditional E-value: 1.5e-151
  Arginosuc_synth   1 vLaysGGlDtsviikllkeklgeeviavavdvGqeeedldevkekalklgavksvvvDakeefvedyifpaikanalYedrYllgtalaRPlia 94 
                      vLaysGGlDts+i+++l e++  evi ++++vGqe ed +++++ka  +ga+k+++ D ++ef++d ++pa k na+Ye+ Yllgt+laRP+ia
       EPX73457.1   9 VLAYSGGLDTSCILAWLIEEG-WEVICYMANVGQE-EDWETARQKAMGVGAKKVYIEDLRDEFIHDTVLPAAKCNAIYENVYLLGTSLARPIIA 100
                      8******************99.9************.********************************************************** PP

  Arginosuc_synth  95 kklvevakkegaeavahGctGkGnDqvRfevsirslaPdlkviaPvRelelt.....ReeeieyakekgipvevtkkkpysiDenllgrsieag 183
                      ++++++a+ke++ av+hGctGkGnDqvRfe++ ++l+Pd++viaP+R + ++     R++ ++ya+ekgipv +t+kkp+s+Den+++ s+eag
       EPX73457.1 101 RRQIQIAEKENCIAVSHGCTGKGNDQVRFELAYYALKPDIQVIAPWRLPVFFdrfagRTDLLNYAAEKGIPVTQTTKKPWSMDENIVHCSYEAG 194
                      *************************************************999999*************************************** PP

  Arginosuc_synth 184 iLedpknappediyeltkdpakapdepeeveiefekGvPvald...geelsvlelieklneiagkhGvGRiDivedRlvglksReiYeapaalv 274
                      iLedp+ app d+++lt dp++apde+ee+ + fekG P +l+   ge ++v++++++ln ia+++GvGRiDive+R+ glksR++Ye+p++++
       EPX73457.1 195 ILEDPSLAPPTDMWTLTVDPKDAPDEEEELAVYFEKGNPCKLEckdGEFTDVVKIFHQLNTIARRNGVGRIDIVENRFSGLKSRGCYETPGLTI 288
                      ******************************************9777888999****************************************** PP

  Arginosuc_synth 275 Likahkdlekltlerevakfkkivee.kyaelvYkGlwfsPlkealdafiektqervtGtvrvklfkGsvvvlgResees.lYdeelasydeed 366
                      L++ah dle lt+erev+ +++++ + + ++++Y+G +fsP +++l a+ + +qe v+G v++ ++kG+v v gR+s+++ lYde+las+de  
       EPX73457.1 289 LRSAHMDLEGLTMEREVRALRDQFVTfNLSKILYNGQYFSPCTRMLLAANDVSQEVVNGVVKLAVYKGNVSVRGRKSDTArLYDEKLASMDELG 382
                      *********************9876626**************************************************999************* PP

  Arginosuc_synth 367 efdqkeaeGfikihglqak 385
                       fd++ ++Gfi+i +++ +
       EPX73457.1 383 GFDPTWTSGFIQIESIRLR 401
                      ***************9976 PP

>> QueC  Queuosine biosynthesis protein QueC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   7.5e-07    0.0068       2      47 ..       8      53 ..       7      83 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 7.5e-07
                EEEE--SSHHHHHHHHHHHHH-SEEEEEEEESS-TTSHHHHHHHHH CS
        QueC  2 avvllSGGlDSttvlalakkegkevealtfdYgqrhkkeleaakki 47
                +v+  SGGlD + +la+  +eg ev++   + gq ++ e+   k++
  EPX73457.1  8 CVLAYSGGLDTSCILAWLIEEGWEVICYMANVGQEEDWETARQKAM 53
                78999*****************************999887766654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (410 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       456  (0.0254337); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 3003.68
//
Query:       EPX73458.1  [L=237]
Description: histone deacetylase complex subunit Rxt2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-16   60.0   2.4    7.2e-14   52.1   0.1    2.3  2  RXT2_N    RXT2-like, N-terminal


Domain annotation for each model (and alignments):
>> RXT2_N  RXT2-like, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.6    0.0002       3.6       1      43 [.      33      75 ..      33      84 .. 0.77
   2 !   52.1   0.1     4e-18   7.2e-14      87     156 .]      87     156 ..      78     156 .. 0.96

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0002
      RXT2_N  1 tNRGnKLkkkaefvhegrLnsskgdeelkkkveyngserkils 43
                tNRG K kk+++    g++++s+g+++  +     +++r ++s
  EPX73458.1 33 TNRGLKRKKNSKSAYYGSMGNSRGTSVDVDYYSIGNTKRGVIS 75
                8*********************999773344444445666665 PP

  == domain 2  score: 52.1 bits;  conditional E-value: 4e-18
      RXT2_N  87 aeenpykkvrleelLaPltspsdlithpslsrtykskaLteLalqlieliekEqeslvklkkLlevllGd 156
                 +++npy++++++e++aPl +p+ + thp +  +++++ L  La ++ e i +E++   +l++Ll+ llGd
  EPX73458.1  87 DHDNPYHDININETMAPLANPQQIFTHPGIAYIFEQNYLDVLAASAHESISSEHKYAAQLQQLLSALLGD 156
                 468******************************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       617  (0.0344135); expected 358.6 (0.02)
Passed bias filter:                      505  (0.0281667); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 1793.95
//
Query:       EPX73459.1  [L=488]
Description: histone H3 methyltransferase Clr4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.2e-21   76.1   1.1    9.1e-21   75.0   0.1    2.0  2  SET       SET domain
    4.8e-21   75.4   3.2    4.8e-21   75.4   3.2    3.0  3  Pre-SET   Pre-SET motif
    5.1e-13   48.7   0.5    9.9e-13   47.8   0.5    1.5  1  Chromo    Chromo (CHRromatin Organisation MOdifier) domain


Domain annotation for each model (and alignments):
>> SET  SET domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1      0.38   2.3e+03      53      93 ..      89     129 ..      19     189 .. 0.63
   2 !   75.0   0.1   1.5e-24   9.1e-21       1     168 [.     337     449 ..     337     450 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.38
                 HHHHHHHTTSSHHHHHHHHHHHHHHHHHHTHHHHHHHXTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         SET  53 kelakasastllqklakdqkqaekedtdaalkasskaesdl 93 
                 +e+++  +  ++++ +   kq    ++++   +ss  e+++
  EPX73459.1  89 REARSNHTVSNCKNNERVSKQTVSTARKRTSSVSSGRERRY 129
                 55555555555555555555655555555555555555555 PP

  == domain 2  score: 75.0 bits;  conditional E-value: 1.5e-24
                 SCEEEESSXBXTTXEEEEEE.ECCEECHHHHHHHHHH......HTEEEEEXGGXXGGSXHHHHHHHTTSSHHHHHHHHHHHHHHHHHHTHHHHHHHXTT CS
                 xxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         SET   1 GrGvfAtedIpkgeficeyp.eeiiltkdeadksele......aylfslpeapknlaftkelakasastllqklakdqkqaekedtdaalkasskaesd 92 
                 G+Gv++++ Ip g fi  y  e  ++t++ea k++++       ylf+l+                                                 
  EPX73459.1 337 GWGVRSLRFIPSGRFITCYLgE--VITSEEAAKRDKNydqdgiTYLFDLD------------------------------------------------- 384
                 9***************436667..99999999999999************................................................. PP

                 TSXXXHCCCCCHCCCHEEEETEEEEEECCCGTTGGGCEEXSSSSEEEEEEEE......TTSSEEEEEESSXBXTTEEEEEXT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxx RF
         SET  93 lnaskpeagafsaiagysidaralksgngagplarflNHsCdpNcnltvqnv......lrgprvavfAtrdIkkGeEltidY 168
                           f+  ++y++d  a+++g+ +    rf+NHsC+pN+   +++v       + + +a+fA++dI++ eElt+dY
  EPX73459.1 385 ---------MFEDSSVYTVD--AQNYGDIS----RFFNHSCSPNL--AIYSVirnhgfRTIYDLAFFAIKDIEPLEELTFDY 449
                 .........4466789****..99******....***********..6666667**************************** PP

>> Pre-SET  Pre-SET motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.2      0.51   3.1e+03      50      69 ..      97     120 ..      62     164 .. 0.46
   2 !   75.4   3.2   8.1e-25   4.8e-21       5     109 .]     215     318 ..     211     318 .. 0.90
   3 ?    1.7   0.1     0.065   3.9e+02      46     106 ..     470     482 ..     433     484 .. 0.47

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.51
                 ----TTCC-TCCTTSCCCT....C CS
     Pre-SET  50 gCeCkgdClsssskcaCaq....k 69 
                 + +Ck++   s+++ + a+    +
  EPX73459.1  97 VSNCKNNERVSKQTVSTARkrtsS 120
                 333322211112222222223331 PP

  == domain 2  score: 75.4 bits;  conditional E-value: 8.1e-25
                 SSSS-EEEE-SSSS-.-CGCCSEE-SS-EE-TTS--CCC--.....----TTC.C-.TCCTTSCCCTCTTTSB-SSBBTTTSB.HCH-SEEE---TTSS CS
     Pre-SET   5 kekvpipvvnevdse.lppakfeYikknilsegvedkeslarseesgCeCkgd.Cl.sssskcaCaqkeeeeeflaYdekgllkeeekkpiyECnekCk 100
                  +  +i++vnevd+e +p  +f++i+++ l++gv +++     ++sgC+C  d C  + +s+c+C+++ ee + +aYd++g+++ +   +iyECn+ C+
  EPX73459.1 215 LKGPEITLVNEVDDEpCPSLEFQFITEYRLTKGVIPPDPN---FQSGCNCPADgCDlNYPSRCECLDDLEEPKYFAYDAQGRVRLDAPAVIYECNSFCS 310
                 56789**********9999***********9*99965544...368****6666*9999********99999*************************** PP

                 S.-TT-TT- CS
     Pre-SET 101 CssksCknR 109
                 C+s sC+nR
  EPX73459.1 311 CPS-SCPNR 318
                 *76.****9 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.065
                 ....----TTCC-TCCTTSCCCTCTTTSB-SSBBTTTSB.HCH-SEEE---TTSSS.-TT- CS
     Pre-SET  46 seesgCeCkgdClsssskcaCaqkeeeeeflaYdekgllkeeekkpiyECnekCkCssksC 106
                 + ++ C+C                                                   +C
  EPX73459.1 470 KIRRKCKC------------------------------------------------GALNC 482
                 34555666................................................33333 PP

>> Chromo  Chromo (CHRromatin Organisation MOdifier) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.8   0.5   1.7e-16   9.9e-13       1      54 []       6      58 ..       6      58 .. 0.97

  Alignments for each domain:
  == domain 1  score: 47.8 bits;  conditional E-value: 1.7e-16
                EEEEEEEEEEEETTEECEEEEEEETTSTGGGTEEEEGGGCSSHSHHHHHHHHHH CS
      Chromo  1 yeVerIidhrtdkdgleleYlVKWkglpysentWEpeenlekcfqelideFkkr 54
                yeVe+I+d++ d++g+   Y V+W +++  ++tWEp enl+ c ++++ e++++
  EPX73459.1  6 YEVEKIVDEKLDRNGKVRLYRVRWLNYSARSDTWEPPENLSGC-PDILAEWNQK 58
                89*****************************************.*******986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (488 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1103  (0.0615204); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.47
# Mc/sec: 3138.37
//
Query:       EPX73460.1  [L=568]
Description: meiotic chromosome segregation protein Meu6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.9e-21   74.8   0.0    5.9e-21   74.8   0.0    3.2  3  PH_6       Pleckstrin homology domain
    1.9e-05   25.1   0.1    0.00029   21.3   0.1    2.7  1  PH         PH domain


Domain annotation for each model (and alignments):
>> PH_6  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   1.6       1.1   9.7e+03      46      46 ..      76      76 ..      38     129 .. 0.62
   2 !   74.8   0.0   6.6e-25   5.9e-21       1     110 [.     169     281 ..     169     283 .. 0.92
   3 ?    1.4   0.2     0.043   3.8e+02      25      57 ..     404     439 ..     369     460 .. 0.69

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.1
        PH_6 46 e 46
                +
  EPX73460.1 76 Q 76
                2 PP

  == domain 2  score: 74.8 bits;  conditional E-value: 6.6e-25
        PH_6   1 nflytKkffwfgtdave.pkalssllksekeaesaed.aheviawAsetGkGLLffskkedkaspsgvinLadasevaadgeqkFhlta.kGkkhtFka 96 
                 n++y+K+f ++++++ e   +lss++++e +++s+++ + + ia A e  kGLLf+sk++  + psg+i+L d+ +v+a   +kF l   +Gk  t +a
  EPX73460.1 169 NYYYKKHFQGSLNKQPEdDPSLSSEQANESSSSSSQSlYVDRIAKAVEGCKGLLFYSKSQCTSVPSGIISLLDVDKVEAGNGNKFLLYFeSGKTETLEA 267
                 8************7754377888888888888888888************************************************9987********* PP

        PH_6  97 sstaeRdnWvaqlk 110
                 s+++ Rd W++ l+
  EPX73460.1 268 SNVETRDAWIKDLN 281
                 **********9986 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.043
        PH_6  25 lksekeaesaed.ahevi..awAsetGkGLLffskk 57 
                 +++++ ae a++ ah+++  +  ++ G GLL +sk+
  EPX73460.1 404 NQHDEAAEGANTeAHDNVedSPSKKRGFGLLAYSKS 439
                 222334444444466665224567899999999984 PP

>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.1   3.3e-08   0.00029      29     104 ..     218     284 ..     136     285 .. 0.88

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 3.3e-08
                 E..EEEESSTTCTTESSEEEEEESTTEEEEEEECTTSSSSTSEEEEEESTSSSTEEEEEEESSHHHHHHHHHHHHHHH CS
          PH  29 e..llyykndksekdkepkgsislsncevvevvatedpkrkfcfelriverngsrtyllqasseeerkeWikaiqsai 104
                 +  ll+y+++     + p g+isl +++ v      ++++ ++f l +   +g +t +l+as+ e r +Wik++++++
  EPX73460.1 218 CkgLLFYSKS--QCTSVPSGIISLLDVDKV------EAGNGNKFLLYFE--SG-KTETLEASNVETRDAWIKDLNAIL 284
                 4567788777..79****************......6789999999889..88.********************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (568 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1478  (0.0824363); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        70  (0.00390429); expected 17.9 (0.001)
Passed Fwd filter:                        30  (0.00167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.00u 0.32s 00:00:01.32 Elapsed: 00:00:00.47
# Mc/sec: 3618.10
//
Query:       EPX73461.1  [L=258]
Description: hypothetical protein SOCG_02685 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.093   11.0   7.2       0.12   10.6   7.2    1.1  1  DUF2070          Predicted membrane protein (DUF2070)
       0.17   12.0   2.3        0.4   10.7   2.2    1.6  1  PgaD             PgaD-like protein
       0.18   10.5   2.5        0.3    9.8   2.5    1.5  1  DUF2207          Predicted membrane protein (DUF2207)
        0.3   10.9   0.0        0.3   10.9   0.0    2.6  3  Synaptobrevin    Synaptobrevin


Domain annotation for each model (and alignments):
>> DUF2070  Predicted membrane protein (DUF2070)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   7.2   2.7e-05      0.12      80     176 ..      85     192 ..      65     208 .. 0.64

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 2.7e-05
     DUF2070  80 livviisllaillsall..qalvll.alvlslalvfalrllvlvavsdesllkav..lpaliqpllailllvly.......fspesfllllllslifal 166
                 l++ + + lai++ + +  +++ ++    +s+ ++f++ l +lv++ ++ +       +a+i++ l+ ++ +++       ++ e++  ++++ + f+ 
  EPX73461.1  85 LFYNV-VCLAIIFGYKVspYSIAFYgLAGVSIGSIFIFLLTILVTYPEWFTQAGCnmCVAVIYTGLLNVVGFVFyrnvkkiIGFEKMNDIAFYGVCFVN 182
                 22222.2223333333334333333033466999999999999999998776654559***************99******555555555555555555 PP

     DUF2070 167 avylfivvvd 176
                 ++++++++++
  EPX73461.1 183 VAVFVLFWMN 192
                 5555555555 PP

>> PgaD  PgaD-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   2.2     9e-05       0.4      27      99 ..     118     198 ..     107     202 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 9e-05
        PgaD  27 gwiyLfvpllvllawllg......lelfeaeillgl.fseasasevegslseletlrlYalilvviavlLilWaklnrv.r 99 
                 ++i+L++ l+++  w+++      + ++++++l  + f+ +  +++    ++++++++Y++++v +av ++ W++  ++ r
  EPX73461.1 118 IFIFLLTILVTYPEWFTQagcnmcVAVIYTGLLNVVgFVFYRNVKKIIGFEKMNDIAFYGVCFVNVAVFVLFWMNPTAReR 198
                 7999999999999999762222223345555553332333444444444599**********************9766645 PP

>> DUF2207  Predicted membrane protein (DUF2207)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   2.5   6.7e-05       0.3     349     430 ..      44     126 ..       2     198 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 6.7e-05
     DUF2207 349 kakkfkkalkkwksavkkkergyfdkkgkkklkklsalglgliilglilillallllvll.lvfllilllillliaiivlllf 430
                 +     +a ++ +++v+++++  +++++ +k ++++++ ++l+  +++l++++ + + +  + f+++ ++ ++ i+i++l ++
  EPX73461.1  44 LEMADGSAQNSAQESVDNTRSDPLTNEKWWKNFSIGTATIILFYNVVCLAIIFGYKVSPYsIAFYGLAGVSIGSIFIFLLTIL 126
                 45555678889999999999999999999999999999999988888888877777555333344444444444444443333 PP

>> Synaptobrevin  Synaptobrevin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   6.7e-05       0.3      33      82 ..      44      95 ..      39     100 .. 0.65
   2 ?   -3.0   1.0       1.4   6.5e+03      74      84 ..     116     126 ..     109     129 .. 0.44
   3 ?   -0.7   0.4      0.27   1.2e+03      50      82 ..     157     189 ..     139     194 .. 0.67

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 6.7e-05
                   HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHTX...XXXXXXXXXXXXXXXX CS
  Synaptobrevin 33 ldeLvdktenLqssaqqFkkqarklkrkmwwknm...kliiililvvlilili 82
                   l++ +  ++n ++++ + ++++  l ++ wwkn+     +iil++ v++l +i
     EPX73461.1 44 LEMADGSAQNSAQESVD-NTRSDPLTNEKWWKNFsigTATIILFYNVVCLAII 95
                   56666677777777776.678999**********4443344444444333333 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.4
                    XXXXXXXXXXX CS
  Synaptobrevin  74 lvvlililiii 84 
                    + ++i++l i+
     EPX73461.1 116 GSIFIFLLTIL 126
                    33333333333 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.27
                    HHHHHHHHHHHHHHHTXXXXXXXXXXXXXXXXX CS
  Synaptobrevin  50 Fkkqarklkrkmwwknmkliiililvvlilili 82 
                    F ++ +k+     ++++ ++ + ++ v++++l+
     EPX73461.1 157 FYRNVKKIIGFEKMNDIAFYGVCFVNVAVFVLF 189
                    555555555555666667777777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (258 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       953  (0.0531541); expected 358.6 (0.02)
Passed bias filter:                      512  (0.0285571); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 1930.63
//
Query:       EPX73462.1  [L=114]
Description: hypothetical protein SOCG_02686 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       240  (0.0133861); expected 358.6 (0.02)
Passed bias filter:                      227  (0.0126611); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.23s 00:00:00.59 Elapsed: 00:00:00.38
# Mc/sec: 897.69
//
Query:       EPX73463.1  [L=229]
Description: glutathione S-transferase Gst2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.8e-17   62.1   0.5    7.9e-17   61.4   0.0    1.6  2  GST_N     Glutathione S-transferase, N-terminal domain
    1.7e-11   44.1   0.1      5e-11   42.7   0.1    1.7  1  GST_C     Glutathione S-transferase, C-terminal domain
    1.8e-11   44.3   0.0    3.2e-11   43.5   0.0    1.4  1  GST_N_3   Glutathione S-transferase, N-terminal domain
    3.2e-11   43.4   0.0    7.6e-11   42.2   0.0    1.7  1  GST_N_2   Glutathione S-transferase, N-terminal domain
      2e-09   37.5   0.1    4.5e-09   36.4   0.1    1.6  1  GST_C_3   Glutathione S-transferase, C-terminal domain
    1.7e-05   24.8   0.0      5e-05   23.3   0.0    1.8  1  GST_C_2   Glutathione S-transferase, C-terminal domain


Domain annotation for each model (and alignments):
>> GST_N  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.4   0.0   2.6e-20   7.9e-17       2      75 ..       3      79 ..       2      80 .. 0.97
   2 ?   -3.4   0.1       4.2   1.3e+04      32      42 ..     191     201 ..     184     210 .. 0.46

  Alignments for each domain:
  == domain 1  score: 61.4 bits;  conditional E-value: 2.6e-20
                EEEEESSSTSHTHHHHHHHHHHTT-EEEEEEECSTTTCGGCHHHHHHCTTS-SSEEEET...TEEEESHHHHHHHHH CS
       GST_N  2 vltlysirgsprahrirlllaakgveyevvpldfeageekspellklnplgkvPaLedn...gkkltESraIleYia 75
                ++tl+ + + p+++++ ++l +++++y +v ldf ++e+ks+++l  np+g+vP+L+d+   +++++ES aIl Y+ 
  EPX73463.1  3 QFTLFAHKSGPNPWKAVAALRELNLSYDIVYLDFAKNEQKSEKHLAHNPNGRVPTLIDHqnnDYTIWESDAILAYLT 79
                78*************************************************************************95 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 4.2
                 EECSTTTCGGC CS
       GST_N  32 pldfeageeks 42 
                  +++++ +e +
  EPX73463.1 191 LPQLDFEKEFP 201
                 33333333332 PP

>> GST_C  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.7   0.1   1.7e-14     5e-11       7      93 .]     117     214 ..     113     214 .. 0.88

  Alignments for each domain:
  == domain 1  score: 42.7 bits;  conditional E-value: 1.7e-14
                 HHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSSSTTSSCHHHHHHHHHHHHHHHHTTTTT............TTTSHHHHHHHHHHHTSH CS
       GST_C   7 qilllfyvkaeekkeelvdealekvaevlsaleeelkkqdylvGdkltlADialvpilnwlqrlglafg............qekfpnlkawlerimarp 93 
                 q+ ++  +++ e  +++v   ++++++vl +le  l ++ ylv  k+t+AD+ ++ ++n l++  ++ +            +++fp+ +aw++r+ arp
  EPX73463.1 117 QANWFNHFHP-EPVASAVTRYRNETKRVLGVLESILQDKEYLVAGKYTIADLSFALWNNTLPMMFGKGKhefkeelpqldfEKEFPKTYAWHQRLLARP 214
                 6678888888.6888999999**************************************666554444457779999*********************9 PP

>> GST_N_3  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.5   0.0   1.1e-14   3.2e-11       3      72 ..       8      83 ..       6      91 .. 0.85

  Alignments for each domain:
  == domain 1  score: 43.5 bits;  conditional E-value: 1.1e-14
                S-TTSHHHHHHHHHHHHHT--EEEE---...TTTTHHHHHHH-TT--SSEEETT...S-EEESHHHHHHHHHHHH- CS
     GST_N_3  3 gfpaSpyarrvrlaLnekglpvevvevt...pgehdeellaknplgkvPvLedd...gealtdSlaIidyLeelyp 72
                  ++ p+ +++  aL+e++l++ +v ++    ++++e  la np+g+vP+L d    +  +++S+aI+ yL + y+
  EPX73463.1  8 AHKSGPNPWKAVAALRELNLSYDIVYLDfakNEQKSEKHLAHNPNGRVPTLIDHqnnDYTIWESDAILAYLTDIYD 83
                55678999*******************866555569999************76534344************99998 PP

>> GST_N_2  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.2   0.0   2.5e-14   7.6e-11       3      68 ..      13      79 ..      11      81 .. 0.91

  Alignments for each domain:
  == domain 1  score: 42.2 bits;  conditional E-value: 2.5e-14
                HHHHHHHHHHHHCT--EEEEEEH...-TTSHHHHHHHHCTTTSSSEEE-CTTE..EEESHHHHHHHHH CS
     GST_N_2  3 PwahRvlialalkglediisvvvlepkgfekseefprlnprgtVPvLwdkdgq..vineSseIlryle 68
                P ++++  al++++l + i  + +  k ++kse  +++np+g VP+L+d++++   i+eS +Il yl 
  EPX73463.1 13 PNPWKAVAALRELNLSYDIVYL-DFAKNEQKSEKHLAHNPNGRVPTLIDHQNNdyTIWESDAILAYLT 79
                8899**************9776.778999********************977779***********96 PP

>> GST_C_3  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.4   0.1   1.5e-12   4.5e-09      23      99 .]     134     223 ..     115     223 .. 0.85

  Alignments for each domain:
  == domain 1  score: 36.4 bits;  conditional E-value: 1.5e-12
                 HHHHHHHHCHHHHHHHHHHCHGTSSSSTTS--HHHHHHHHHHHHHHHH..............TCC..CC-HHHHHHHHHHHTSHHHHHHHCTC CS
     GST_C_3  23 efleerlpkflkyfekvlkkkgggylvgdklTyADlalfqvldgleea..............eal..kkfpklkalyervearpkikaYlesr 99 
                 + ++++ +++l+++e +l+   ++ylv +k T+ADl++  + ++l  +                +  k+fpk  a+++r+ arp++ a l++r
  EPX73463.1 134 TRYRNETKRVLGVLESILQ--DKEYLVAGKYTIADLSFALWNNTLPMMfgkgkhefkeelpqL-DfeKEFPKTYAWHQRLLARPAVSATLKER 223
                 55678899***********..899************99999999999999**99999888641.25699*****************9988775 PP

>> GST_C_2  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.0   1.7e-08     5e-05       3      69 .]     132     209 ..     130     209 .. 0.90

  Alignments for each domain:
  == domain 1  score: 23.3 bits;  conditional E-value: 1.7e-08
                 HHCHHHHHCCHCHHHCTTT---SS.CTTCS--HHH..HHHHHHHHHHHHHHHS-.........---TT-HHHHHHHHH CS
     GST_C_2   3 averaleqldaaldaleahLadspflfGdqptlaD..ialapflvrlraagpgf.........direaypnlraWler 69 
                 av+r +++ ++ l +le++L d+ +l  ++ t+aD  +al+     +++   ++         d+++++p+  aW++r
  EPX73463.1 132 AVTRYRNETKRVLGVLESILQDKEYLVAGKYTIADlsFALWNNTLPMMFGKGKHefkeelpqlDFEKEFPKTYAWHQR 209
                 689999*****************************9999999888888885445578899999999**********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       414  (0.0230911); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1732.04
//
Query:       EPX73464.1  [L=168]
Description: But2 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       439  (0.0244855); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1294.23
//
Query:       EPX73465.1  [L=248]
Description: hypothetical protein SOCG_02689 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.65    9.8   2.0        1.2    9.0   0.0    2.2  3  DUF4538   Domain of unknown function (DUF4538)


Domain annotation for each model (and alignments):
>> DUF4538  Domain of unknown function (DUF4538)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.0   6.5e-05       1.2       2      24 ..     105     127 ..     104     133 .. 0.84
   2 ?   -3.7   0.2      0.57     1e+04       7      19 ..     148     160 ..     145     163 .. 0.51
   3 ?   -0.7   0.1     0.066   1.2e+03       6      24 ..     181     199 ..     178     201 .. 0.84

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 6.5e-05
     DUF4538   2 rglkyvllvggvvgliglalYPi 24 
                 r++ +  l+gg++g+i l lY+ 
  EPX73465.1 105 RTQDFWGLFGGFIGAISLFLYSM 127
                 56667789*************86 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 0.57
     DUF4538   7 vllvggvvgligl 19 
                 ++l ++++ + g 
  EPX73465.1 148 AALYVCFLNVPGF 160
                 3445555555555 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.066
     DUF4538   6 yvllvggvvgliglalYPi 24 
                 yv+ ++ +v ++ +++ Pi
  EPX73465.1 181 YVVCFVDFVLFVFISMNPI 199
                 6788889999999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       674  (0.0375927); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.20s 00:00:00.63 Elapsed: 00:00:00.37
# Mc/sec: 2005.79
//
Query:       EPX73466.1  [L=62]
Description: pseudo ring cleavage dioxygenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (62 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       171  (0.00953762); expected 358.6 (0.02)
Passed bias filter:                      167  (0.00931452); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.21s 00:00:00.55 Elapsed: 00:00:00.37
# Mc/sec: 506.89
//
Query:       EPX73467.1  [L=158]
Description: hypothetical protein SOCG_02691 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       612  (0.0341346); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 1124.74
//
Query:       EPX73468.1  [L=237]
Description: homocysteine synthase Met17 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.8e-59  199.8   0.0    2.5e-58  197.4   0.0    1.8  1  Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
  ------ inclusion threshold ------
       0.15   12.4   0.2       0.38   11.1   0.2    1.7  1  YvbH_ext         YvbH-like oligomerisation region


Domain annotation for each model (and alignments):
>> Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  197.4   0.0   2.8e-62   2.5e-58     139     342 ..       5     230 ..       2     236 .. 0.94

  Alignments for each domain:
  == domain 1  score: 197.4 bits;  conditional E-value: 2.8e-62
                      EEEEEESS-TTTT----HHHHHHHHHHTT-EEEEEGTTTHT.TTS-GGGGT-SEEEEETTTTTTCSSS--EEEEEESSCHHHHHHHHHHH.... CS
  Cys_Met_Meta_PP 139 klvylEtptnpllkvvDiekiaklakkagvlvvvDntfasp.llqrplklgaDivvhSaTKylgGhsdvvaGvivvkgkeelkkelkflq.... 227
                      k +y+E ++np+++v+Die+ia++a++ gv+ +vDntf ++ +l+rp+++gaDiv+hSa            G+++ +   ++++++k+++    
       EPX73468.1   5 KPFYIEFIGNPMYNVLDIERIAEVAHADGVPQLVDNTFEAGgYLIRPIDHGADIVLHSAP----------SGLAIMER--RWEEHAKRFPelvq 86 
                      669***********************************9998****************97..........68888666..67777777777899 PP

                      ............................HHHT-B--HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEE-TTSTTSTTHHHHHHH CS
  Cys_Met_Meta_PP 228 ............................nalGavlspfdawlllrGlkTLslRlerhqenAlkvAefLekhpkvekvyYpglpshpqhelakkq 293
                                                  +++G   spf+a+ll++Gl+TLslR+erh +nA+++A++L++hp+v++v+Yp +pshp+++lak++
       EPX73468.1  87 phpgyhglcfveafgnvayayavrtqafRDVGGNASPFAAFLLIQGLETLSLRMERHTQNAFALANYLNNHPRVQWVSYPDIPSHPSYDLAKQY 180
                      ********************************************************************************************** PP

                      SSS.G-SEEEEEESSHHHHHHHHHHC-SSSEECSS-SSSS-EEEETTTTT CS
  Cys_Met_Meta_PP 294 lkg.aggvlsFelkseeekakkfvdnlklfslaeslGgveslielpasmt 342
                      lk+ +g+v+sF  k++  k++k+vd+l+l+  ++++G++++l+++p+  +
       EPX73468.1 181 LKKdFGAVFSFIAKGGPDKSRKVVDSLQLANQLANVGDAKTLVITPCLYH 230
                      8752777***************************************9765 PP

>> YvbH_ext  YvbH-like oligomerisation region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.2   4.2e-05      0.38      43      56 ..     177     190 ..     174     192 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 4.2e-05
                 HHHHS-S--HHHHH CS
    YvbH_ext  43 rkkynkKDFgevFe 56 
                  k+y kKDFg vF+
  EPX73468.1 177 AKQYLKKDFGAVFS 190
                 69***********6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       328  (0.0182944); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1687.20
//
Query:       EPX73469.1  [L=107]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-16   59.4   0.0    2.7e-16   59.2   0.0    1.1  1  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
  ------ inclusion threshold ------
       0.05   13.6   0.0      0.075   13.0   0.0    1.2  1  UCR_14kD  Ubiquinol-cytochrome C reductase complex 14kD subun
        0.1   12.5   0.0       0.12   12.2   0.0    1.1  1  DUF2313   Uncharacterised protein conserved in bacteria (DUF2
       0.12   12.6   0.0       0.17   12.1   0.0    1.2  1  RRM_8     RRM-like domain


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.2   0.0     6e-20   2.7e-16       2      70 .]      10      77 ..       9      77 .. 0.96

  Alignments for each domain:
  == domain 1  score: 59.2 bits;  conditional E-value: 6e-20
                EEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1  2 fVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrelk 70
                 +gnL+p vte+ L+  F +fG+i ++ l ++  +  + faf eF+s+edA++A++++n   l +r+++
  EPX73469.1 10 HIGNLAPGVTENVLYNAFIPFGEIITVALHNK-EKADRSFAFLEFDSSEDAKEAIANMNYSVLYDRVIR 77
                59*****************************5.*********************************996 PP

>> UCR_14kD  Ubiquinol-cytochrome C reductase complex 14kD subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   1.7e-05     0.075      34      77 ..      55      99 ..      51     105 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.7e-05
    UCR_14kD 34 enedvqeALrrLpeeeaydRvfRlkrA.lqlslkhklLPkeewtk 77
                 +ed +eA++ ++ ++ ydRv+R+  A + ls++++ +P++ +++
  EPX73469.1 55 SSEDAKEAIANMNYSVLYDRVIRVSPAnFALSTEETPVPDSAMIT 99
                5899********************998578999999999887665 PP

>> DUF2313  Uncharacterised protein conserved in bacteria (DUF2313)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   2.7e-05      0.12      70     162 ..       3      85 ..       1      86 [. 0.85

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2.7e-05
     DUF2313  70 eRRaavlaklnekgglsiayikklaesllGeeeveItenqparvganrerYifqVqvpgasgagenLeawgaavlecllerikPahtevilay 162
                 +RR+a +   n   g+++  + +    + Ge  ++++ ++++++++++   +f +++ ++++a+e  + ++ +vl++ + r+ Pa+    +a+
  EPX73469.1   3 DRRKATIHIGNLAPGVTENVLYNAFIPF-GE-IITVALHNKEKADRSF---AF-LEFDSSEDAKEAIANMNYSVLYDRVIRVSPAN----FAL 85 
                 6888888888889999999999999999.97.9999999966666555...55.79999999*****9999***************....765 PP

>> RRM_8  RRM-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   3.8e-05      0.17      17      78 ..      11      74 ..       4      79 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 3.8e-05
       RRM_8 17 vshilYpvtsevLhqvYdaYGavavqvLavs..twqvealvsflsshDaerarsathgrniYDg 78
                + ++   vt++vL+  +  +G +    L  +  + +  a + f ss Da+ a ++ +   +YD+
  EPX73469.1 11 IGNLAPGVTENVLYNAFIPFGEIITVALHNKekADRSFAFLEFDSSEDAKEAIANMNYSVLYDR 74
                55566679*************87666665441134566999*********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       326  (0.0181828); expected 358.6 (0.02)
Passed bias filter:                      290  (0.0161749); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.36u 0.25s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 816.32
//
Query:       EPX73470.1  [L=211]
Description: Sid2-Mob1 kinase complex regulatory subunit Mob1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    9.2e-75  250.3   1.6    1.1e-74  250.1   1.6    1.0  1  Mob1_phocein  Mob1/phocein family


Domain annotation for each model (and alignments):
>> Mob1_phocein  Mob1/phocein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  250.1   1.6     6e-79   1.1e-74       1     169 []      32     203 ..      32     203 .. 0.99

  Alignments for each domain:
  == domain 1  score: 250.1 bits;  conditional E-value: 6e-79
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxx. RF
  Mob1_phocein   1 eatlgsgdlkeavklPkgedlneWlavhvvdffneinllygtisefcteqscptmsagpkyeYlwadee.vkkpvklsApeYidllmdwiesqlnd. 95 
                   eatlgsg+l eavklPkged neW+a++++df+++in+lygti+efcte++cp+m+agp++eY w+de+ + kp+k+ Ap+Yi+ l++w++++l++ 
    EPX73470.1  32 EATLGSGSLMEAVKLPKGEDVNEWIAMNTMDFYTQINMLYGTITEFCTEKTCPQMNAGPNFEYYWQDEKvYVKPTKMNAPDYINTLLEWAQEKLDNk 128
                   589****************************************************************9679************************** PP

                   .xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Mob1_phocein  96 .lfpskagspfpknflkvvkkilkrlfrvyaHiYihHfeeiaeleleahlntcfkhfvlfvkeFkLidkkelepl 169
                    lfp+++g++fp++f+k+v++i++rlfr+yaHiY++Hf+ +++lele++lnt+fkhfv+f+keF+L+d ke++p+
    EPX73470.1 129 rLFPTEIGVEFPRDFKKMVQQIFRRLFRIYAHIYCSHFHVMVALELESYLNTSFKHFVFFCKEFNLLDGKEYAPM 203
                   ************************************************************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       692  (0.0385967); expected 358.6 (0.02)
Passed bias filter:                      525  (0.0292822); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1527.21
//
Query:       EPX73471.1  [L=348]
Description: 1-acylglycerol-3-phosphate acyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.7e-24   85.3   0.0    4.8e-24   84.5   0.0    1.4  1  Acyltransferase  Acyltransferase
    2.5e-16   59.5   0.1    5.2e-16   58.5   0.1    1.4  1  Acyltransf_C     Acyltransferase C-terminus


Domain annotation for each model (and alignments):
>> Acyltransferase  Acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.5   0.0   5.4e-28   4.8e-24       9     133 ..      90     237 ..      78     239 .. 0.86

  Alignments for each domain:
  == domain 1  score: 84.5 bits;  conditional E-value: 5.4e-28
  Acyltransferase   9 nlpekgpailvaNHqsylDvlllwlllyksngprnvviiakkellsipllgflmrllgfifidRksnaraagsleniselleeg..kl.vviFP 99 
                      ++  +++ i++aNHq y+D++++w+l+y+ + +  ++i++k++l++ip+lg++m+l++fif++R + +r+a+++e+  + +++   +  +++FP
       EPX73471.1  90 TIA-SERNIVIANHQLYTDWMYIWWLAYTAKQHSFIYIVLKDSLKWIPILGWGMQLYRFIFLSR-KWDRDAATMEREFRFINNVpePAsLLMFP 181
                      444.5889***********************5599*****************************.888889999998885555444445***** PP

  Acyltransferase 100 EGtrsre..................gel.lpfkkGlvrlaakak...kgvpivPva 133
                      EGt++ +                   +l lp  +Gl++++ +++   +++++++++
       EPX73471.1 182 EGTNLVQntyersklyadktgvampKNLmLPRVRGLFYSLSQLRgsmTYLYDFTFV 237
                      ****9999999999999999999975557999999999999998888888887765 PP

>> Acyltransf_C  Acyltransferase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.5   0.1   5.8e-20   5.2e-16       3      68 ..     258     325 ..     257     332 .. 0.81

  Alignments for each domain:
  == domain 1  score: 58.5 bits;  conditional E-value: 5.8e-20
  Acyltransf_C   3 LsG.kpsevhiyvrripleevPedeeelaeWlhelfeeKDklleeFyktgtFe.pgkevkiprrkksl 68 
                   ++G + +++h++vrr+ ++++P+de+  ++Wl++++ eKD+l+e F+ tg F+ p+k  ++ r k+ l
    EPX73471.1 258 FEGaRLRRMHVHVRRFRISDIPTDEKLFTKWLYQRWYEKDQLIEDFKHTGGFPgPRKLNTTVRLKSRL 325
                   56766679********************************************7544444444666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (348 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       443  (0.0247086); expected 358.6 (0.02)
Passed bias filter:                      264  (0.0147247); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.28s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 2179.07
//
Query:       EPX73472.1  [L=408]
Description: GTP binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.8e-33  115.4   0.0    2.8e-33  114.8   0.0    1.3  1  MMR_HSR1_C      GTPase of unknown function C-terminal
    1.3e-20   73.6   0.0    2.5e-20   72.6   0.0    1.5  1  MMR_HSR1        50S ribosome-binding GTPase
    3.2e-09   36.5   0.0    2.6e-07   30.3   0.0    2.4  2  FeoB_N          Ferrous iron transport protein B
     0.0037   17.3   0.0     0.0084   16.2   0.0    1.6  1  Dynamin_N       Dynamin family
     0.0048   16.8   0.2        3.2    7.6   0.0    2.3  2  RsgA_GTPase     RsgA GTPase
     0.0064   16.3   0.2        3.2    7.5   0.1    2.2  2  ATP_bind_1      Conserved hypothetical ATP binding protein
  ------ inclusion threshold ------
      0.027   14.4   0.1      0.087   12.7   0.0    1.8  2  Ploopntkinase3  P-loop Nucleotide Kinase3
      0.032   13.2   0.0      0.065   12.2   0.0    1.5  1  MeaB            Methylmalonyl Co-A mutase-associated GTPase M
      0.042   13.4   0.1        6.6    6.2   0.0    2.3  2  GTP_EFTU        Elongation factor Tu GTP binding domain
        0.1   12.4   0.9       0.44   10.3   0.2    2.1  2  AAA_29          P-loop containing region of AAA domain
       0.15   12.5   0.0       0.52   10.8   0.0    1.8  2  ABC_tran        ABC transporter
       0.21   11.8   0.1       0.59   10.4   0.0    1.8  2  AAA_28          AAA domain
       0.22   10.9   0.0        0.8    9.1   0.0    1.8  2  KTI12           Chromatin associated protein KTI12


Domain annotation for each model (and alignments):
>> MMR_HSR1_C  GTPase of unknown function C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.8   0.0     2e-36   2.8e-33       1     112 []     226     339 ..     226     339 .. 0.98

  Alignments for each domain:
  == domain 1  score: 114.8 bits;  conditional E-value: 2e-36
  MMR_HSR1_C   1 alNKaDlpaadenieklkekypkdkkvvpvsAaaElaLrkaakqglikYepgdedfeiked....klkeldekqkkaLekirdlvlkrygsTGVqealn 95 
                 alNK+D+p++d ni+k++++++ ++ +v++sA +E++Lr++akqg+++Ye+g+e++++ ++    +lk+l+e++++++ +i+d+vl+r+gsTGV ++l+
  EPX73472.1 226 ALNKIDHPDSDANISKIARREDANR-LVLASAVSEVFLRRLAKQGFVNYEEGSEFVDTIDEfpdsGLKPLSESLRAKITDIQDMVLFRHGSTGVCNVLA 323
                 89******************99877.********************************9999**99********************************* PP

  MMR_HSR1_C  96 aavfelldlivVYPVed 112
                 +a+ ell+l++VYPV++
  EPX73472.1 324 RAI-ELLELVPVYPVKN 339
                 ***.***********97 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.6   0.0   1.8e-23   2.5e-20       2      87 ..       7     124 ..       6     157 .. 0.79

  Alignments for each domain:
  == domain 1  score: 72.6 bits;  conditional E-value: 1.8e-23
                 EEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEETTEE...........................EEEEECGGCSSHHHHHHHHHHHHHHH CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvklkgke...........................ielvDtpGliegaseekglgkaflal 73 
                 +++vG+p +GKSt++nalt+++a+++++p+tT+++n++    +  +                           i+l+D++Gli ga+++kglg++fl+ 
  EPX73472.1   7 IGFVGKPSSGKSTMLNALTDATAKTGNFPFTTIEPNRAIGYAQ-VDcacsrfglegqcrpiyggckngkraipIQLLDVAGLIPGAHTGKGLGNKFLDD 104
                 89***********************************976522.22445555555566666666666666777*************************8 PP

                 HC.TSEEEEEEETT.....T CS
    MMR_HSR1  74 ee.adlillvvdas.....e 87 
                  + a+++++vvd+s     e
  EPX73472.1 105 LRhANALVHVVDVSgttdaE 124
                 8879********88444330 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.3   0.0   1.9e-10   2.6e-07       3      39 ..       7      43 ..       5      52 .. 0.90
   2 ?    3.8   0.0     0.028        38      98     119 ..     213     234 ..     183     251 .. 0.83

  Alignments for each domain:
  == domain 1  score: 30.3 bits;  conditional E-value: 1.9e-10
                EEEEESTTSSHHHHHHHHHTTSEEEEESTTSSSEEEE CS
      FeoB_N  3 valvGnpnvGkttlfnaltgakqkvgNwpGvtvekke 39
                + +vG+p +Gk+t++nalt+a+ k gN+p +t+e ++
  EPX73472.1  7 IGFVGKPSSGKSTMLNALTDATAKTGNFPFTTIEPNR 43
                679******************************9765 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.028
                 HHHHHHTTSSEEEEEETHHHHH CS
      FeoB_N  98 tlqllelgvpvvlalnmideae 119
                 + + ++++ p+v+aln+id+ +
  EPX73472.1 213 VSRFVDIKFPTVIALNKIDHPD 234
                 567899*************855 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   6.1e-06    0.0084       1      22 [.       7      28 ..       7      41 .. 0.82

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 6.1e-06
                EEEEEBTTTTHHHHHHHHHTS- CS
   Dynamin_N  1 iavvGsqSsGKSSvlnaLlged 22
                i +vG+ SsGKS++lnaL+ + 
  EPX73472.1  7 IGFVGKPSSGKSTMLNALTDAT 28
                789***************9776 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.0    0.0038       5.2     103     126 ..       8      30 ..       3      35 .. 0.80
   2 !    7.6   0.0    0.0023       3.2      30      71 ..     204     245 ..     188     268 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0038
                  EEECSTTSSHHHHHHHHCTT---- CS
  RsgA_GTPase 103 vlvGqSGvGKStLinallpelelk 126
                   +vG+   GKSt++nal+   ++k
   EPX73472.1   8 GFVGKPSSGKSTMLNALTDA-TAK 30 
                  58999999*********987.444 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0023
                  --HHHHHHHHHHHHHTT-EEEEEEE-GGG--HHHHHHHHHHH CS
  RsgA_GTPase  30 lslnlldrfLvlaeekgiepvivlnKiDlleeeeeleelkee 71 
                   ++ +ldr++  + + + + vi+lnKiD  +++ ++++++ +
   EPX73472.1 204 WDEATLDRIVSRFVDIKFPTVIALNKIDHPDSDANISKIARR 245
                  67789************************9999977666554 PP

>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.1    0.0023       3.2       2      24 ..      10      32 ..       9      38 .. 0.87
   2 !    6.8   0.0    0.0038       5.2     150     192 ..     214     257 ..     184     303 .. 0.81

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0023
  ATP_bind_1  2 vGpaGsGKttfvgalseilelrg 24
                vG ++sGK+t+ +al++ + ++g
  EPX73472.1 10 VGKPSSGKSTMLNALTDATAKTG 32
                8**************99887765 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0038
  ATP_bind_1 150 samlrlelPhvvvlnkfDllkek.lekeleffedvealslllek 192
                 s  + ++ P+v++lnk+D  +++ +  ++ + ed ++l l+   
  EPX73472.1 214 SRFVDIKFPTVIALNKIDHPDSDaNISKIARREDANRLVLASAV 257
                 5678899************9988777888888888777666555 PP

>> Ploopntkinase3  P-loop Nucleotide Kinase3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   6.3e-05     0.087       5      29 ..       6      30 ..       3      53 .. 0.88
   2 ?   -2.4   0.1       2.8   3.9e+03     111     140 ..     141     170 ..     136     176 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 6.3e-05
  Ploopntkinase3  5 liylvGqPGaGkstlmaeltkgfdr 29
                    li +vG+P +Gkst++ +lt++  +
      EPX73472.1  6 LIGFVGKPSSGKSTMLNALTDATAK 30
                    7889****************98765 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 2.8
  Ploopntkinase3 111 yevtlalldhdqadawrkarskklgrvqne 140
                     y+ + a++  +  ++w ++r +++  + n+
      EPX73472.1 141 YNEMTAWIGTNLKEKWPNTRRRHIASKANP 170
                     666778888899999999999999888776 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   4.7e-05     0.065      27      57 ..       2      32 ..       1      41 [. 0.91

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 4.7e-05
                S-SEEEEEEE-TTSSHHHHHHHHHHHHHCTT CS
        MeaB 27 GraqvvGltGvPGaGkstlvealglelrrrG 57
                Gr   +G+ G P +Gkst+++al+   ++ G
  EPX73472.1  2 GRDILIGFVGKPSSGKSTMLNALTDATAKTG 32
                89999******************99887777 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.011        15       5      30 ..       6      31 ..       3      38 .. 0.87
   2 ?    6.2   0.0    0.0048       6.6     120     145 ..     218     245 ..     206     347 .. 0.73

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.011
                EEEEEESTTSSHHHHHHHHHHHTTSS CS
    GTP_EFTU  5 nigiighvDhGKtTLtdrLlyktgai 30
                 ig++g   +GK+T++ +L+ +t ++
  EPX73472.1  6 LIGFVGKPSSGKSTMLNALTDATAKT 31
                5899***************9888765 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.0048
                 HTTTEEEEEEESCGST..HHHHHHHHHH CS
    GTP_EFTU 120 kegvpiivfiNKmDrl..kaelkeivee 145
                 + + p+++++NK+D++  +a++++i++ 
  EPX73472.1 218 DIKFPTVIALNKIDHPdsDANISKIARR 245
                 556789**********665555554433 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.2   0.00032      0.44      27      43 ..       9      25 ..       3      33 .. 0.89
   2 ?   -0.4   0.0      0.73     1e+03      10      32 ..     361     384 ..     354     389 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00032
      AAA_29 27 ltGpsGsGKSTllDAiq 43
                ++G+  sGKST+l A++
  EPX73472.1  9 FVGKPSSGKSTMLNALT 25
                689**********9986 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.73
      AAA_29  10 gtfdghtieidlkg.atlltGpsG 32 
                 gt  g++++i l g a+ ++G +G
  EPX73472.1 361 GTTAGQVAQIVLGGeAMSIIGING 384
                 7888999999999999*****998 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00037      0.52      13      36 ..       6      29 ..       2      44 .. 0.87
   2 ?   -2.6   0.0       5.2   7.1e+03      79      92 ..     184     216 ..     137     241 .. 0.54

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00037
                EEEEEESTTSSHHHHHHHHTTSS- CS
                xxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 13 kvaivGenGaGKStLlkllagllk 36
                ++++vG+  +GKSt+l++l+  + 
  EPX73472.1  6 LIGFVGKPSSGKSTMLNALTDATA 29
                5899***************98765 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 5.2
                 H...................HHHTCHHHHHHHS CS
                 x...................xxxxxxxxxxxxx RF
    ABC_tran  79 n...................esdeeiekalskl 92 
                 n                   ++++ +++++s++
  EPX73472.1 184 NpattakvldslhlntplesWDEATLDRIVSRF 216
                 244444444444444444444444455555555 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00043      0.59       3      23 ..       8      33 ..       6      53 .. 0.73
   2 ?   -3.3   0.0       6.9   9.5e+03      98     138 ..     133     172 ..     127     177 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00043
      AAA_28  3 vitGgestGKTtlleaLaar.....g 23
                 ++G +s+GK+t+l+aL++      +
  EPX73472.1  8 GFVGKPSSGKSTMLNALTDAtaktgN 33
                5899*************954344444 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 6.9
      AAA_28  98 aeleaaarekrydlvfllppapeidddgeRredleereaid 138
                 ++++ ++  +++++++ ++  +++ +++ Rr+   +++ ++
  EPX73472.1 133 PSVDIEWLYNEMTAWIGTNLKEKW-PNTRRRHIASKANPVH 172
                 556667788888888888888888.7888887666666555 PP

>> KTI12  Chromatin associated protein KTI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.0   0.00058       0.8       3      27 ..       6      30 ..       5      51 .. 0.86
   2 ?   -1.0   0.0      0.69   9.5e+02     123     137 ..     202     216 ..     143     273 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00058
                EEEEE--TTSSHHHHHHHHHHHHHH CS
       KTI12  3 LvvltGlPssGKstrakeLakalee 27
                L+ + G PssGKst+ + L +a ++
  EPX73472.1  6 LIGFVGKPSSGKSTMLNALTDATAK 30
                78899**************998776 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.69
                 ..S-HHHHHHHHHH- CS
       KTI12 123 eeyekelldaLiqRy 137
                 e++++++ld +++R+
  EPX73472.1 202 ESWDEATLDRIVSRF 216
                 348888888888888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (408 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       437  (0.0243739); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 2698.80
//
Query:       EPX73473.1  [L=185]
Description: rheb GTPase Rhb1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.6e-48  164.4   0.7    1.8e-48  164.2   0.7    1.0  1  Ras           Ras family
    9.7e-16   58.1   0.1    1.4e-15   57.6   0.1    1.2  1  Roc           Ras of Complex, Roc, domain of DAPkinase
    3.3e-08   33.2   0.0    3.6e-08   33.1   0.0    1.1  1  Arf           ADP-ribosylation factor family
    1.8e-06   27.6   0.1    1.9e-05   24.3   0.1    2.1  2  GTP_EFTU      Elongation factor Tu GTP binding domain
    1.5e-05   24.5   0.1    1.8e-05   24.2   0.1    1.2  1  SRPRB         Signal recognition particle receptor beta subun
    0.00067   19.7   0.1    0.00088   19.3   0.1    1.3  1  MMR_HSR1      50S ribosome-binding GTPase
     0.0014   18.6   0.4       0.13   12.2   0.0    2.1  2  RsgA_GTPase   RsgA GTPase
  ------ inclusion threshold ------
      0.022   14.8   0.0      0.033   14.2   0.0    1.4  1  AAA_14        AAA domain
      0.075   12.9   1.4       0.17   11.8   1.4    1.7  1  ATPase_2      ATPase domain predominantly from Archaea
      0.097   12.7   0.1       0.45   10.6   0.0    1.8  2  MMR_HSR1_Xtn  C-terminal region of MMR_HSR1 domain


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.2   0.7     1e-51   1.8e-48       2     161 ..       9     168 ..       8     169 .. 0.98

  Alignments for each domain:
  == domain 1  score: 164.2 bits;  conditional E-value: 1e-51
                 EEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHHH CS
         Ras   2 lvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeikrv 100
                 + ++G+++vGK+sl++++v+++F e+y +Ti ++ ++k+i+++g+e   ei DTAGq+e++ l+++   + +g +lvy+its++sfe vk   ++i ++
  EPX73473.1   9 IAVLGSRSVGKSSLTVQYVENHFVESYYPTI-ENTFSKNIKYKGQEFATEIIDTAGQDEYSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNH 106
                 789****************************.******************************************************************* PP

                 ST.TTSEEEEEEETTTGGGG-SS-HHHHHHHHHHHTSEEEEEBTTTTCTHHHHHHHHHHHHH CS
         Ras 101 ae.envpivLvGnKvDleekravsteegeelakelglkfletSAktnenveeafeellreil 161
                 +  e vpiv+vGnK+Dl+ +r+vs+eeg++la+e++++++e+SA++nenv  afe +++ei+
  EPX73473.1 107 TGtEWVPIVVVGNKSDLHMQRTVSAEEGKQLANEWKCAWTEASARHNENVARAFELIISEIE 168
                 *9888*****************************************************9986 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.6   0.1   7.9e-19   1.4e-15       1     119 [.       8     122 ..       8     123 .. 0.86

  Alignments for each domain:
  == domain 1  score: 57.6 bits;  conditional E-value: 7.9e-19
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE...GHHHHCHH CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd...srssenlk 96 
                 ++ ++G  +vGK+sl  ++ve++f e++ +ti  +f+ k++ k kg       +++  +i DtaGq++++ l++ +  + + ++lvy    ++s+e +k
  EPX73473.1   8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFS-KNI-KYKG-------QEFATEIIDTAGQDEYSILNSKHSIGIHGYVLVYSitsKSSFEMVK 97 
                 5899*****************************9995.555.3443.......57899*****************************955333457788 PP

                 HHHHHHHHHCSSS..-EEEEEE-TT CS
         Roc  97 eWlkelkkvagks..pvilvgnkiD 119
                    +++ +++g++  p+++vgnk D
  EPX73473.1  98 IVRDKILNHTGTEwvPIVVVGNKSD 122
                 88899999988765699******99 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.1   0.0     2e-11   3.6e-08      13     135 ..       5     131 ..       1     167 [. 0.79

  Alignments for each domain:
  == domain 1  score: 33.1 bits;  conditional E-value: 2e-11
                 TEEEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSSEE.EEEEEETTEEE..EEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHHHHHH CS
         Arf  13 kelrilllGLDnaGKtTilkklkleelvt.tvPTigfn.veeleiknlkf..tvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkal 107
                 k+ ri +lG  + GK+ +  ++ ++++v+   PTi  + ++++++k+ +f  ++ D  Gq++   l ++    +++ + v   + ++ +e  k   +++
  EPX73473.1   5 KSRRIAVLGSRSVGKSSLTVQYVENHFVEsYYPTIENTfSKNIKYKGQEFatEIIDTAGQDEYSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKI 103
                 7889******************9999987589***9874689***887773368**************************999**************** PP

                 CTSGCCTTSEEEEEEE-TTSTTSS-HHH CS
         Arf 108 leeeelkevallvlaNKqDlpealseee 135
                 l++   + v+++v++NK Dl+ + + + 
  EPX73473.1 104 LNHTGTEWVPIVVVGNKSDLHMQRTVSA 131
                 *******************976543332 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.14   2.5e+02       3      21 ..       6      24 ..       4      35 .. 0.87
   2 !   24.3   0.1   1.1e-08   1.9e-05      58     189 ..      44     164 ..      37     169 .. 0.75

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.14
                EEEEEEEESTTSSHHHHHH CS
    GTP_EFTU  3 irnigiighvDhGKtTLtd 21
                 r i+++g    GK++Lt 
  EPX73473.1  6 SRRIAVLGSRSVGKSSLTV 24
                6899*************95 PP

  == domain 2  score: 24.3 bits;  conditional E-value: 1.1e-08
                 CEEEEEETTCSSEEEEEEEESSSGGGHHHHHHHHHT-SEEEEEEETTTB.....STHHHHHHHHHHHHTTTEEEEEEESCGSTHHHHHHHHHHHHHHHH CS
    GTP_EFTU  58 saaisleketkkylinliDtPGHvdFskevirglrvlDgavlvvdaveG.....vepqteevlrlalkegvpiivfiNKmDrlkaelkeiveevkqkls 151
                 s++i+++  ++++   +iDt G  ++s   ++    ++g+vlv ++++      v+    ++l++  +e vpi+v+ NK D   ++     e   ++l 
  EPX73473.1  44 SKNIKYK--GQEFATEIIDTAGQDEYSILNSKHSIGIHGYVLVYSITSKssfemVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQRTVSAEEG--KQL- 137
                 6778888..*************************************96666666999999*********************986654333222..223. PP

                 HHHHHHHHHHHTTTTTEEEEEEBTTTTBTHHHHHHHHH CS
    GTP_EFTU 152 rkeeklekygekgekevpvvfgSalkgegvktllealv 189
                    +++         ++    +Sa ++e+v   +e ++
  EPX73473.1 138 --ANEW---------KCAWTEASARHNENVARAFELII 164
                 ..1222.........23444456666666665555555 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.1     1e-08   1.8e-05       3     131 ..       6     130 ..       4     171 .. 0.82

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 1e-08
                 --EEEEE-STTSSHHHHHHHHHHSS---B---S.S-EEETTG....GGTT-SEEEETT-GCCSHHHHHHHHHHGGEEEEEEEEETTS-HHHHHHHHHHH CS
       SRPRB   3 kpavllvGlsdsGKTslftrLttdsvkktvtSq.essaalkv.ksekgskltliDfPGheklrqklleklkaksslkglvfvvDStidpkevkevAEll 99 
                 ++++ ++G    GK sl  +  ++++ +++    e+++++++  + +++ +++iD  G+++  + +l++ k++  ++g v v   +i +k   e+   +
  EPX73473.1   6 SRRIAVLGSRSVGKSSLTVQYVENHFVESYYPTiENTFSKNIkYKGQEFATEIIDTAGQDE--YSILNS-KHSIGIHGYVLV--YSITSKSSFEMVKIV 99 
                 678999******************9999998777*****999334578899*********8..567887.788889985554..688999988888888 PP

                 HHHHHHHHHHTT---EEEEEE-TTSTT---HH CS
       SRPRB 100 yeilliteklkdavdiliACnKqelflakspk 131
                  + +l+ +   + v+i++  nK++l + ++ +
  EPX73473.1 100 RDKILNHT-GTEWVPIVVVGNKSDLHMQRTVS 130
                 76555444.5899**************99866 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.1   4.9e-07   0.00088       1      82 [.       8      84 ..       8     142 .. 0.60

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 4.9e-07
                EEEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEETTEEE..EEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEE CS
    MMR_HSR1  1 evaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvklkgkei..elvDtpGliegaseekglgkaflaleeadlillv 82
                ++a++G   vGKS+L  + ++++   s +p t  ++  +++k+kg+e+  e++Dt+G  +    e ++ ++ +++   +  +lv
  EPX73473.1  8 RIAVLGSRSVGKSSLTVQYVENHFVESYYP-TIENTFSKNIKYKGQEFatEIIDTAG-QD----EYSILNSKHSIGI-HGYVLV 84
                69******************9865444444.44444555566666554449******.33....3344444443222.222222 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.1      0.01        19      98     121 ..       5      28 ..       2      63 .. 0.85
   2 !   12.2   0.0   7.1e-05      0.13      16      92 ..      78     158 ..      53     180 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.01
                  TTSEEEEECSTTSSHHHHHHHHCT CS
  RsgA_GTPase  98 kdktsvlvGqSGvGKStLinallp 121
                  k++ ++++G+  vGKS+L  + ++
   EPX73473.1   5 KSRRIAVLGSRSVGKSSLTVQYVE 28 
                  56778899**********876665 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 7.1e-05
                  --EEEEEEESTT.TT--HHHH..HHHHHHHHHTT-EEEEEEE-GGG--HHH.HHHHHHHHHHHTTSEEEE--TTTHTTHHH CS
  RsgA_GTPase  16 vdqllivvslke.pelslnll..drfLvlaeekgiepvivlnKiDlleeee.eleelkeelealgyevllvsaktkeglee 92 
                  +   ++v s+++  ++++  +  d++L +  ++ +++v+v nK Dl  +++ ++ee k+  +++ ++ +  sa+++e++++
   EPX73473.1  78 IHGYVLVYSITSkSSFEMVKIvrDKILNHTGTEWVPIVVVGNKSDLHMQRTvSAEEGKQLANEWKCAWTEASARHNENVAR 158
                  56667787776414555555544789999999***************999988999999999*******999999988775 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   1.9e-05     0.033       4      45 ..       8      46 ..       5      83 .. 0.65

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 1.9e-05
      AAA_14  4 ilvitGaRrvGKTtllkqlikellvkkesilyinldderdkk 45
                 +++ G R vGK+ l  q++++++    +  y ++++   k+
  EPX73473.1  8 RIAVLGSRSVGKSSLTVQYVENHF---VESYYPTIENTFSKN 46
                57899******************9...333444444332222 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   1.4   9.6e-05      0.17      24     111 ..      10     101 ..       5     173 .. 0.62

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 9.6e-05
    ATPase_2  24 fiYGpegsGKtaLlkeiienledkdkyviyyialreesiskldefie..........eeeekkklekal..........giavpkaeleeilkeksklv 102
                  + G++++GK++L  + +en+    +   yy  +++ ++++++ + +                                +i +    l  +++ +sk  
  EPX73473.1  10 AVLGSRSVGKSSLTVQYVENH----FVESYYPTIENTFSKNIKYKGQefateiidtaG----------QdeysilnskhSIGIHGYVL--VYSITSKSS 92 
                 588*****************9....556777777777777777762222223332322..........03333333322333333222..333444444 PP

    ATPase_2 103 fkaiellle 111
                 f+ ++ + +
  EPX73473.1  93 FEMVKIVRD 101
                 444444444 PP

>> MMR_HSR1_Xtn  C-terminal region of MMR_HSR1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.61   1.1e+03      47      80 ..      41      79 ..      37     106 .. 0.65
   2 ?   10.6   0.0   0.00025      0.45      52     100 ..     108     163 ..      96     168 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.61
  MMR_HSR1_Xtn 47 dviegnrvYipclyvlNKiDlisleeldelare.....p 80
                  ++ ++n +Y+   ++   iD++ ++e + l+++     +
    EPX73473.1 41 NTFSKNIKYKGQEFATEIIDTAGQDEYSILNSKhsigiH 79
                  566778888888888888888888888877775334431 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00025
  MMR_HSR1_Xtn  52 nrvYipclyvlNKiDl.....isleeldelare..pnsvviSaekelnldeLkeki 100
                    ++++p ++v NK Dl     +s ee ++la+e     +  Sa+++ n+ +  e i
    EPX73473.1 108 GTEWVPIVVVGNKSDLhmqrtVSAEEGKQLANEwkCAWTEASARHNENVARAFELI 163
                   4589************9889899999999999732366779999999987766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       601  (0.0335211); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 1200.60
//
Query:       EPX73474.1  [L=593]
Description: wings apart-like Wapl [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-18   66.7   8.6    7.5e-18   64.5   1.6    2.2  2  WAPL      Wings apart-like protein regulation of heterochroma


Domain annotation for each model (and alignments):
>> WAPL  Wings apart-like protein regulation of heterochromatin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.5   1.6   4.2e-22   7.5e-18       1     153 [.     154     305 ..     154     325 .. 0.79
   2 !    6.4   0.8   0.00019       3.3     243     335 ..     369     512 ..     364     530 .. 0.69

  Alignments for each domain:
  == domain 1  score: 64.5 bits;  conditional E-value: 4.2e-22
        WAPL   1 nvrtlhElreaGenqefvdeveyildgleegqpl.svRclSlisLaskcaspqfrrqlra.hgiakrlfkalvdapdddspsLalaaaalfyvlssdsh 97 
                 +++++hElr aGe q+  de+ey++dg+++++++ + R++S++++++k  +  fr +l++ +++ +r+f+++  + + + +  ++++++ +   +  s+
  EPX73474.1 154 QMKSIHELRFAGEKQRTMDEIEYLIDGISSKTNSaNSRYNSFLEICEKVYDRMFRICLKSsQDFQQRIFSEIFLEDKLQ-TISQTYIFSSMADENDFSQ 251
                 58***************************666666***********************97255667*****97777777.5568999999999999999 PP

        WAPL  98 dadldrssgllrlllkLLesdtdivtlakdrktnlsksdqksivalveeklratkt 153
                 ++   +s+++ +l  + ++ +++     +   +  sk+ q s++ l++     tk+
  EPX73474.1 252 SLLENCSDDIYNLFHSAITERDQRP--IQSLIQAYSKTVQSSFRGLFNHPSPLTKE 305
                 9999999999999999998886655..44445556999999999886665544443 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.00019
        WAPL 243 seenqayllrlkkkqlvikliklLqdissqir....................................................lenhlaglssarckl 289
                 s+  +a+  ++++++ ++kl++lL+ + +                                                       l ++l+  +  ++k+
  EPX73474.1 369 STLDKAENFTWDDGV-LKKLCDLLSFLLKSTLkdngilkdrgsgdspcfliissceklvrtlirsvnsdsssvstlcnselpkqLFEVLNDRNFFKNKS 466
                 555667777789998.99999999865544446888888888888888887777777777777777777777777777777777444455555566677 PP

        WAPL 290 eeellllalrlllnlTndnpsaceafgskkvGaveglisvalslfs 335
                 + ell++ l+lll ++ +++    ++ +k+v   + +++v l+ ++
  EPX73474.1 467 NMELLMMSLGLLLEISEESKVFVMNLPTKQVSTSKTMLDVLLQFYK 512
                 7777788888888887777777777777777666666666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (593 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       763  (0.0425568); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.24s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 4132.24
//
Query:       EPX73475.1  [L=290]
Description: XP-A family Rhp14 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-25   89.3   0.7    2.8e-25   88.0   0.7    1.7  1  XPA_C     XPA protein C-terminus
    6.9e-10   38.8   6.2    1.5e-09   37.7   6.2    1.5  1  XPA_N     XPA protein N-terminal
  ------ inclusion threshold ------
      0.029   14.4   2.5      0.029   14.4   2.5    1.8  2  Vma12     Endoplasmic reticulum-based factor for assembly of 


Domain annotation for each model (and alignments):
>> XPA_C  XPA protein C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.0   0.7   4.6e-29   2.8e-25       1      51 []     148     198 ..     148     198 .. 0.99

  Alignments for each domain:
  == domain 1  score: 88.0 bits;  conditional E-value: 4.6e-29
       XPA_C   1 kysLiTkTeakedYLLtdedLkdrelLkflkkkNPhnstwgdMkLYlklqV 51 
                 kysL+TkTe+k+dYLLtd++L+d e+L++l+k+NPh++ w++M+LYl++qV
  EPX73475.1 148 KYSLLTKTECKQDYLLTDPELRDAEVLPHLLKANPHQQGWSNMMLYLRFQV 198
                 8*************************************************9 PP

>> XPA_N  XPA protein N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.7   6.2   2.5e-13   1.5e-09       1      31 [.     114     144 ..     114     144 .. 0.97

  Alignments for each domain:
  == domain 1  score: 37.7 bits;  conditional E-value: 2.5e-13
       XPA_N   1 apkCdeCgkefldSyLldnFdysVCDkCRDk 31 
                 apkC++Cg+++ld  +ld F+++VC++CR+k
  EPX73475.1 114 APKCEDCGSIELDLRYLDVFKCKVCHSCREK 144
                 69***************************97 PP

>> Vma12  Endoplasmic reticulum-based factor for assembly of V-ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.5       1.7     1e+04      29      36 ..      91      98 ..      73     108 .. 0.50
   2 ?   14.4   2.5   4.9e-06     0.029      12      55 ..     220     262 ..     212     281 .. 0.78

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 1.7
       Vma12 29 rLraeqee 36
                +Lr +qe+
  EPX73475.1 91 ELREQQER 98
                34444443 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 4.9e-06
       Vma12  12 ppppkpepspEykallarLraeqeereYkrlinsvdpsqksgkt 55 
                 + ++++++++ ++++l +Lr++ ++ +Y+r+  ++++++k++ +
  EPX73475.1 220 ESQKQEQKNKKFEKQLLELRKKTKTSNYSRMSIREKKKHKHS-Y 262
                 56789999***********************98866444433.3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2465  (0.137487); expected 358.6 (0.02)
Passed bias filter:                      560  (0.0312343); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 2144.16
//
Query:       EPX73476.1  [L=867]
Description: leucine-rich repeat protein Sog2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.3e-41  142.6  44.2    9.9e-27   94.3   0.7    3.1  3  SOG2         RAM signalling pathway protein
    3.1e-15   55.7   6.5    8.8e-09   35.0   1.3    3.0  2  LRR_8        Leucine rich repeat
    8.6e-11   41.9  13.6    0.00013   22.2   0.8    4.5  6  LRR_4        Leucine Rich repeats (2 copies)
    0.00018   21.1   1.9    0.00074   19.1   0.4    2.3  2  LRR_9        Leucine-rich repeat
      0.005   17.2  12.4        3.3    8.6   0.0    6.4  5  LRR_1        Leucine Rich Repeat
  ------ inclusion threshold ------
       0.17   11.5   0.0       0.32   10.6   0.0    1.3  1  PA_decarbox  Phenolic acid decarboxylase (PAD)


Domain annotation for each model (and alignments):
>> SOG2  RAM signalling pathway protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8  20.5     0.018        54     174     366 ..     202     417 ..     180     428 .. 0.66
   2 !   94.3   0.7   3.3e-30   9.9e-27      23     167 ..     493     628 ..     485     641 .. 0.88
   3 !   59.5   8.1   1.2e-19   3.5e-16     327     505 ..     625     795 ..     620     797 .. 0.89

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.018
        SOG2 174 rtksksisttssgssstlvssaesstesrassvtytartRhagsfsaqdveqGaaltplrsdqipfnl............................... 241
                 +++s+++  +++  s ++ +s  ss + + s +t ta++Rh+++ s + ++   +l      ++++n+                               
  EPX73476.1 202 HNRSSPNLVANHYYSDDPDTSGLSSAPMTRSLTTATADHRHSSLSS-HHLNSTESLF-----NPSHNFpraipnprhntkdqyvphsihpsnneflstt 294
                 5555555555555555666666666666667777777777666555.3333333333.....3333334444555566677777777777777777777 PP

        SOG2 242 .srsrrssssgnsaspa.angaqsetsersasssg.vqssasstPlgegstspp.galsrqslsttgststltsssksrsssrsnt.nasastprslat 335
                   + ++ s++++ +++  + g+ + +++rs s +  ++ss+ s+P+   +++ p + ++++   ++g+++++  s+k  +ss+s+  n+ +   +++++
  EPX73476.1 295 tGSEQNLSPMSPFLNNRlEGGRIQARPKRSVSLATgLNSSSLSKPVPMLNDQIPrSPHNSNFIDESGQKTPTIESPKDFGSSTSTLrNVPNHSAPLSQS 393
                 644444445555555540455555567788888889************9999999999999999999999999999*9999999877776766666666 PP

        SOG2 336 tpappasaesfastltasrintlaavDeqll 366
                 tp  +++ ++      + ri +++ + ++l+
  EPX73476.1 394 TPTGSPERKT------KERIRSNS-INDELY 417
                 7763333333......44455444.556666 PP

  == domain 2  score: 94.3 bits;  conditional E-value: 3.3e-30
        SOG2  23 elVdaaRglLFalsqihqairqitsfvkeeriavslerllysasshidnLieaLerfdslesrrgtpspsvdraviklCktivsaFkkiisvLrknlka 121
                 ++ +  Rg+LFalsq++q+irq + f+ + +i   +  +   +++hi++Li   e +  + s    ++  +   vi++C  ++  F+k+i v +k    
  EPX73476.1 493 KVLEPFRGILFALSQVQQSIRQQMLFCNNPTILDTMRHVSFTTNTHIKRLIRSFEEITFM-S----DAVYNPTPVIHACLACIGSFRKLIDVTKKFSND 586
                 455888******************************************************.6....34456689************************* PP

        SOG2 122 fvesdDvrYiRtllLmlygSmaEvrnawksiapeleavqplkptas 167
                 fv+ +DvrY+R +lL l+g++ E+ n+++++++++  +q+    ++
  EPX73476.1 587 FVNFSDVRYTRLFLLVLFGATKELQNSYQQLNSQDPLKQS----PT 628
                 **********************************954444....22 PP

  == domain 3  score: 59.5 bits;  conditional E-value: 1.2e-19
        SOG2 327 astprslattpappasaesfastltasrintlaavDeqlletletavklalvvysqlteeiskvaeassagqqrlteelakkirdLtdtcrqameltka 425
                 +s+ ++  + p+ +a+++ f  +l++ +++ ++++ +ql e++e a++ a++v+ +l + i+k   +s    + l +   +k+++L  + + a e+tk+
  EPX73476.1 625 QSPTNPARNIPPMSATSSRF--NLEKPTTTLNSDFTKQLQEQIELATSSATSVLCLLVDSIEKNTLSSDVNNENLGSNTVAKLKELSMLSSSAGEVTKK 721
                 55666666777777777777..5555666667889*******************************9999***************************** PP

        SOG2 426 LrerLsllklkedlsekgsttsektklwedinaFlksivsilaliKelslmhelPnevrpnLaslakatkevtvlLdlsS 505
                 L+   ++ +      e  +  +e + l +d + F+ksi+ +++l+K++s++ ++ + ++  L  +++ tk++t+l++ sS
  EPX73476.1 722 LKGHSKAYQ------ENVNDENEWQRLLDDTQMFVKSIIAVANLAKTVSSEYTFQKNIISGLSAVTRSTKDLTILISSSS 795
                 ****99992......56666667779*****************************************************9 PP

>> LRR_8  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.4   0.3   1.9e-11   5.6e-08       3      61 .]      56     112 ..      54     112 .. 0.96
   2 !   35.0   1.3   2.9e-12   8.8e-09       2      61 .]     101     158 ..     100     158 .. 0.95

  Alignments for each domain:
  == domain 1  score: 32.4 bits;  conditional E-value: 1.9e-11
                 -SEEE-TTS--SEE-TTSSTT-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8   3 LtsLdLsnNrltslddeaFkglsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61 
                  ++L L +N l  +++e  + +++L++L++++N  + + p+++  L+sL+ Ld+s+N++
  EPX73476.1  56 ISRLALGHNFLRTIGPEILN-FTRLRYLNIRSNAFREF-PEVLCRLESLEILDISRNKI 112
                 678*****************.9****************.9*****************97 PP

  == domain 2  score: 35.0 bits;  conditional E-value: 2.9e-12
                 T-SEEE-TTS--SEE-TTSSTT-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8   2 nLtsLdLsnNrltslddeaFkglsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61 
                 +L++Ld+s+N++ +l++++   l n +vL++s N+l  l p  fs +p+L+ L L++N++
  EPX73476.1 101 SLEILDISRNKIRELPQSFGA-LMNIRVLSISKNRLIEL-PSYFSYMPNLEILKLENNHI 158
                 79*************987665.*****************.9*****************98 PP

>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1      0.35     1e+03       5      39 ..      33      69 ..      32      75 .. 0.66
   2 !   11.3   0.1   0.00012      0.37       6      33 ..      59      87 ..      54      96 .. 0.82
   3 !   19.4   0.1   3.4e-07     0.001       1      39 [.      77     115 ..      77     119 .. 0.86
   4 !   21.9   0.4   5.8e-08   0.00017       2      38 ..     101     137 ..     100     140 .. 0.88
   5 !   22.2   0.8   4.4e-08   0.00013       2      36 ..     124     158 ..     124     161 .. 0.89
   6 ?   -2.6   0.3       2.9   8.7e+03      22      30 ..     702     710 ..     685     714 .. 0.55

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.35
                EEE--SS---E-S-..HHH.-TT--EEE-.-S-----G CS
       LRR_4  5 vLdLsnNqltdipl..lek.lpnLkeLdLsgNnlitdl 39
                +LdLs+  l+d+p   le   +    L L g n+++++
  EPX73476.1 33 TLDLSHLSLRDVPYaqLERiQDRISRLAL-GHNFLRTI 69
                69999888999888554443455666767.44466666 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 0.00012
                EE--SS---E-S-..HHH-TT--EEE-.-S CS
       LRR_4  6 LdLsnNqltdipl..leklpnLkeLdLsgN 33
                L L++N l++i++  l+ ++ L++L++ +N
  EPX73476.1 59 LALGHNFLRTIGPeiLN-FTRLRYLNIRSN 87
                6699*********9666.*********666 PP

  == domain 3  score: 19.4 bits;  conditional E-value: 3.4e-07
                 SS--EEE--SS---E-S-..HHH-TT--EEE-.-S-----G CS
       LRR_4   1 pnLevLdLsnNqltdipl..leklpnLkeLdLsgNnlitdl 39 
                 ++L++L++++N  +++p   ++ l +L+ Ld+s+N +i+ l
  EPX73476.1  77 TRLRYLNIRSNAFREFPEvlCR-LESLEILDISRN-KIREL 115
                 68*************9998555.*********999.66555 PP

  == domain 4  score: 21.9 bits;  conditional E-value: 5.8e-08
                 S--EEE--SS---E-S-.HHH-TT--EEE-.-S----- CS
       LRR_4   2 nLevLdLsnNqltdipl.leklpnLkeLdLsgNnlitd 38 
                 +Le+Ld+s N+++++p  ++ l n ++L++s N li  
  EPX73476.1 101 SLEILDISRNKIRELPQsFGALMNIRVLSISKNRLI-E 137
                 7****************8888*********999444.4 PP

  == domain 5  score: 22.2 bits;  conditional E-value: 4.4e-08
                 S--EEE--SS---E-S-.HHH-TT--EEE-.-S--- CS
       LRR_4   2 nLevLdLsnNqltdipl.leklpnLkeLdLsgNnli 36 
                 n +vL++s N+l ++p+ ++ +pnL+ L L +Nn i
  EPX73476.1 124 NIRVLSISKNRLIELPSyFSYMPNLEILKL-ENNHI 158
                 789**************9888*********.66665 PP

  == domain 6  score: -2.6 bits;  conditional E-value: 2.9
                 -TT--EEE- CS
       LRR_4  22 lpnLkeLdL 30 
                   +LkeL++
  EPX73476.1 702 VAKLKELSM 710
                 445666665 PP

>> LRR_9  Leucine-rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.4   2.5e-07   0.00074      15     100 ..      73     158 ..      66     161 .. 0.91
   2 ?    0.4   0.1      0.13     4e+02      63     142 ..     702     780 ..     680     785 .. 0.82

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 2.5e-07
       LRR_9  15 yinairereldlrgykipvienlGatldqfdtidlsdndirkl.dgfPllkrlktlllnnnrivriaegleevlPnleelvltnnel 100
                  +n  r r l++r++ +    ++   l+ ++ +d+s n+ir+l ++f  l  +++l++++nr++ +      ++Pnle l l nn++
  EPX73476.1  73 ILNFTRLRYLNIRSNAFREFPEVLCRLESLEILDISRNKIRELpQSFGALMNIRVLSISKNRLIELPSY-FSYMPNLEILKLENNHI 158
                 56788999999******9999999*******************668*******************9765.5799***********97 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.13
       LRR_9  63 lkrlktlllnnnrivriaegleevlPnleelvltnnelqeladldPlaslkklellsllknpvtnkkeyrlyviyklkql 142
                 + +lk l++ +     ++++l+      +e v  +ne q+l d d  + +k++  ++ l  +v+++  +++ +i  l  +
  EPX73476.1 702 VAKLKELSMLSSSAGEVTKKLKGHSKAYQENVNDENEWQRLLD-DTQMFVKSIIAVANLAKTVSSEYTFQKNIISGLSAV 780
                 5678888888888888888888888888999999999999999.888899999999999999999999999888777655 PP

>> LRR_1  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1       1.9   5.8e+03       1       1 [.      55      55 ..      33      75 .. 0.51
   2 ?    3.4   0.1     0.055   1.6e+02       1      12 [.      78      89 ..      78      99 .. 0.76
   3 !    8.6   0.0    0.0011       3.3       1      23 []     101     122 ..     101     122 .. 0.90
   4 ?    2.8   0.1     0.087   2.6e+02       1      17 [.     124     140 ..     124     143 .. 0.85
   5 ?    5.3   0.2     0.014        42       1      18 [.     147     168 ..     147     172 .. 0.73

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 1.9
       LRR_1  1 n 1 
                +
  EPX73476.1 55 R 55
                0 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.055
       LRR_1  1 nLrhLdLsnnpl 12
                +Lr+L++++n +
  EPX73476.1 78 RLRYLNIRSNAF 89
                69*******977 PP

  == domain 3  score: 8.6 bits;  conditional E-value: 0.0011
       LRR_1   1 nLrhLdLsnnpllglppnsfqnL 23 
                 +L+ Ld+s+n + + +p+sf  L
  EPX73476.1 101 SLEILDISRNKI-RELPQSFGAL 122
                 69**********.9999999865 PP

  == domain 4  score: 2.8 bits;  conditional E-value: 0.087
       LRR_1   1 nLrhLdLsnnpllglpp 17 
                 n r+L +s n+l+ lp+
  EPX73476.1 124 NIRVLSISKNRLIELPS 140
                 789*********87765 PP

  == domain 5  score: 5.3 bits;  conditional E-value: 0.014
       LRR_1   1 nLrhLdLsnnpl....lglppn 18 
                 nL+ L L+nn++    +++ +n
  EPX73476.1 147 NLEILKLENNHIiyppPHIVSN 168
                 8**********94444555555 PP

>> PA_decarbox  Phenolic acid decarboxylase (PAD)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00011      0.32      82     145 ..     499     564 ..     490     571 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00011
  PA_decarbox  82 hGviffPrwveeepektvcfqnd..hidlmeayrdagptyPkevvdefatitfledagkddeevia 145
                  +G++f    v+++  + + f n+   +d+m++   + +t+ k+++ +f +itf++da  +   vi+
   EPX73476.1 499 RGILFALSQVQQSIRQQMLFCNNptILDTMRHVSFTTNTHIKRLIRSFEEITFMSDAVYNPTPVIH 564
                  677777788888877777776653379******************************999988886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (867 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       584  (0.0325729); expected 358.6 (0.02)
Passed bias filter:                      333  (0.0185733); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.70u 0.27s 00:00:00.97 Elapsed: 00:00:00.46
# Mc/sec: 5712.42
//
Query:       EPX73477.1  [L=120]
Description: hypothetical protein SOCG_02701 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       472  (0.0263261); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 879.14
//
Query:       EPX73478.1  [L=126]
Description: ribosomal protein subunit L38 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.7e-44  148.5   1.8    9.6e-44  148.4   1.8    1.0  1  Ribosomal_L14  Ribosomal protein L14p/L23e


Domain annotation for each model (and alignments):
>> Ribosomal_L14  Ribosomal protein L14p/L23e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.4   1.8   5.4e-48   9.6e-44       1     121 [.       1     125 [.       1     126 [] 0.98

  Alignments for each domain:
  == domain 1  score: 148.4 bits;  conditional E-value: 5.4e-48
                    ..CSS-EEE--SSSSBSEEEEEEETT-.---EE-SSSEEEEEESSS-T.........TTSSCEEEEEEEE-SS-EE-TTS-EEEESS-EEEEB-TT CS
  Ribosomal_L14   1 miqlktrlkvaDNsgakevecikvlggkkrkaasvGdiivvsvkkakp......kgkvkkgdvvkavvvrtkkevrrkdGsvirfddnaaVllnkk 90 
                    mi lk +lkv+DNsga  +eci+v++++  ++asvGd++vv+vkk+++      ++kvk+gd+++avvvrtk ++rr+dG ++rfddna+Vl+nk+
     EPX73478.1   1 MIGLKGILKVIDNSGATFAECIRVVRAG--QFASVGDEVVVVVKKSRTgpniatANKVKRGDIHHAVVVRTKFPLRRADGRYVRFDDNACVLVNKD 94 
                    99*************************9..****************9999**999***************************************** PP

                    S-BSS-.B-SBEEHHHHHH.-HHHHHTBSBE CS
  Ribosomal_L14  91 geplGtrifgpvarelrekkflkivslApev 121
                    +ep+Gtri ++va+elr k+++k++slAp+ 
     EPX73478.1  95 REPIGTRILSVVANELRMKNHTKLASLAPRT 125
                    ****************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       404  (0.0225333); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 892.63
//
Query:       EPX73479.1  [L=517]
Description: ARS-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.4e-53  178.4   2.2    1.1e-52  178.2   0.9    1.8  2  DDE_1        DDE superfamily endonuclease
    6.9e-25   86.5   1.1    1.8e-24   85.2   0.1    2.2  2  HTH_ABP1_N   Fission yeast centromere protein N-terminal doma
      9e-12   44.9   0.1    2.9e-11   43.2   0.1    1.9  1  HTH_Tnp_Tc5  Tc5 transposase DNA-binding domain


Domain annotation for each model (and alignments):
>> DDE_1  DDE superfamily endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.43   2.6e+03     112     139 ..      26      53 ..      17      94 .. 0.74
   2 !  178.2   0.9   1.9e-56   1.1e-52       1     175 []     207     384 ..     207     384 .. 0.98

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.43
       DDE_1 112 llqPldqgvvselKarYrrqllqallee 139
                   +P + +v + +K+++ + + q  l  
  EPX73479.1  26 EKKPTQIEVADWFKSEFGKPIAQSTLSR 53 
                 5678888888888888888777776655 PP

  == domain 2  score: 178.2 bits;  conditional E-value: 1.9e-56
       DDE_1   1 kerltvllcanaagsekLkplvigkaksprafkngektkkkldveyksnrkawltssifeeWLkvfdkrleaekrkilLlldssrshe.tvel...les 95 
                 k+++++++can++gsekL+++vig+ak praf ++ + ++++++++ s++ka++t +i+++WL++fd  +e  +rk+lL+ld+s+ h+ +ve+   ++ 
  EPX73479.1 207 KAKISIVMCANSTGSEKLPLWVIGYAKRPRAFHSTGTYPENIGIHWCSSGKASMTLTIMKKWLRWFDANME--GRKVLLVLDNSDVHRlAVESircSSH 303
                 689********************************************************************..***************99999999999 PP

       DDE_1  96 elqniklvflPassasllqPldqgvvselKarYrrqllqalleeqnrlskeqkkltlldalkfikkAwn.avsketiksaf 175
                 + qn++++flP++s++++qP++ gv++++K  Yr q+ ++   + ++ +++q k++ll a+k+++ +wn ++s++ i +af
  EPX73479.1 304 AFQNTTIIFLPSNSTNVYQPFELGVFNAFKILYRLQWTRYWKTLLSNGQSPQTKTNLLLAIKWVASSWNiSLSESIIDRAF 384
                 9****************************************************************************9998 PP

>> HTH_ABP1_N  Fission yeast centromere protein N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.2   0.1     3e-28   1.8e-24       2      60 ..       7      65 ..       5      66 .. 0.97
   2 ?   -1.4   0.1      0.33     2e+03      30      46 ..     364     380 ..     352     383 .. 0.86

  Alignments for each domain:
  == domain 1  score: 85.2 bits;  conditional E-value: 3e-28
  HTH_ABP1_N  2 RkaiskeqkkaLRawafqqnprpsqkaliaWFeqeygqkisqstvSeiLSskYayLDda 60
                R ++s+++kkaLRa++++q+++p+q ++++WF++e+g++i+qst+S+iLS+++ayLDd+
  EPX73479.1  7 RITVSGKEKKALRAFYYNQEKKPTQIEVADWFKSEFGKPIAQSTLSRILSDRFAYLDDT 65
                8899*****************************************************97 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.33
  HTH_ABP1_N  30 iaWFeqeygqkisqstv 46 
                 i+W  + ++  +s+s++
  EPX73479.1 364 IKWVASSWNISLSESII 380
                 79***********9998 PP

>> HTH_Tnp_Tc5  Tc5 transposase DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.2   0.1   4.8e-15   2.9e-11       1      60 [.      79     139 ..      79     143 .. 0.96

  Alignments for each domain:
  == domain 1  score: 43.2 bits;  conditional E-value: 4.8e-15
                  THHHHHHHHHHHHHHC-CT---SCHHHHHHHHHHH.HHSSSCT-TT-S--CHHHHHHHHHT CS
  HTH_Tnp_Tc5   1 spelEkaLleWirqlrergipitgelirekAqela.slaadlgepdfkaSkgWldrFkkRh 60 
                  +p lEkaL++Wi++++ +    t+ +++++A +l+   +++   + + +S+gW++ F++R+
   EPX73479.1  79 YPALEKALYNWIQDAHFTRTKATNDILKAAATKLWgTIPEYREASMPEFSNGWVEGFRRRY 139
                  799*********************************99999999****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (517 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       771  (0.043003); expected 358.6 (0.02)
Passed bias filter:                      517  (0.028836); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 3489.04
//
Query:       EPX73480.1  [L=143]
Description: sorting nexin Snx3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.6e-27   93.4   0.2      1e-26   93.1   0.2    1.1  1  PX        PX domain


Domain annotation for each model (and alignments):
>> PX  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.1   0.2   5.7e-31     1e-26       2     112 ..      23     136 ..      22     137 .. 0.96

  Alignments for each domain:
  == domain 1  score: 93.1 bits;  conditional E-value: 5.7e-31
                 SEEEEEEEEEEEETTSSEEEEEEEEEETTS.....SSEEEEEEEHHHHHHHHHHHHHHHTTSTSTSSSTSGSSSSSCTTSHHHHHHHHHHHHHHHHHHH CS
          PX   2 dlaqvsvleretsgskkhsyylyevelktg.....akewtvkRrYsdFeeLhskLlrkfprvkiPplPkkvlfgsvrkkdeefiekrrkgLeeyLqrll 95 
                 ++++++v++++ +g +++ ++++e++++t+      ++++v+RrYs+Fe++++ L+ +  rv+iPplP+kv   +   + e++ie+rr+gLe +L+ ++
  EPX73480.1  23 NILEIEVVNPQNHGIGRGMFTTFEIQCRTNmpyfrLRYSSVRRRYSEFEKFRDMLEHEIGRVSIPPLPGKVFTNR---FREDVIEERRQGLEIFLRAVA 118
                 6899*******************************************************************7766...********************* PP

                 TSCHHHH.SHHHHHHHHS CS
          PX  96 nhpelrn.sevlteFLev 112
                  hp ++  s++l +FL++
  EPX73480.1 119 GHPLIQThSRILSSFLQN 136
                 ****************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       312  (0.017402); expected 358.6 (0.02)
Passed bias filter:                      289  (0.0161191); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 1071.70
//
Query:       EPX73481.1  [L=207]
Description: RNA-binding protein Cwf29 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.8e-19   67.7   0.1    9.1e-19   67.1   0.1    1.3  1  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
    0.00078   19.5   0.0     0.0017   18.4   0.0    1.6  1  RRM_7     RNA recognition motif
  ------ inclusion threshold ------
       0.03   13.9   0.0      0.045   13.3   0.0    1.2  1  RRM_5     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.1   0.1   1.5e-22   9.1e-19       1      68 [.      19      87 ..      19      89 .. 0.96

  Alignments for each domain:
  == domain 1  score: 67.1 bits;  conditional E-value: 1.5e-22
                EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEE CS
       RRM_1  1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggre 68
                +++gnL +d++ee++  +Fs+fG+ ++i+lvrd et+kskg++f +++++++   A++++ + kl +r 
  EPX73481.1 19 IYIGNLDYDLNEEDILNVFSEFGEPTDINLVRDkETKKSKGYCFLKYADQRSTILAVDNMTNVKLLDRL 87
                8************************************************************98888775 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   2.8e-07    0.0017       1      72 [.      16      80 ..      16     104 .. 0.76

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 2.8e-07
       RRM_7  1 srkvFvGGlPiDiteeelkatfkefgk.vlvdwPkkaeskkkaaenskaakgyvflvfedeksvkaLleacte 72
                s  +++G l  D++ee++ + f+efg+ + ++  + +e+        k  kgy fl + d++s    +++ t+
  EPX73481.1 16 SAYIYIGNLDYDLNEEDILNVFSEFGEpTDINLVRDKET--------KKSKGYCFLKYADQRSTILAVDNMTN 80
                5679**********************7134444443333........3357**********998777777655 PP

>> RRM_5  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   7.5e-06     0.045      17      96 ..       9      90 ..       2     113 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 7.5e-06
       RRM_5 17 spgaagvaegsVllVyglepdkvnldklFnlfclYgnvervkflktk.....ketalvqmgdasaveravqHLnnaklfgkrlev 96
                +  +  +++++ + + +l+ d +n + + n+f+ +g+   + +++ k     k++ +++ +d+++  +av+ + n+kl ++ ++v
  EPX73481.1  9 W--HLDYKDSAYIYIGNLDYD-LNEEDILNVFSEFGEPTDINLVRDKetkksKGYCFLKYADQRSTILAVDNMTNVKLLDRLVRV 90
                3..777889999999999987.7999999*******8777777665522223699***********************9996665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1206  (0.0672653); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 1448.12
//
Query:       EPX73482.1  [L=722]
Description: WD repeat protein Lub1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-42  143.1   1.3    7.2e-42  142.2   1.3    1.5  1  PFU       PFU (PLAA family ubiquitin binding)
    1.3e-40  139.4   6.6    1.9e-40  138.8   6.6    1.2  1  PUL       PUL domain
    1.7e-25   88.8  22.1    2.7e-06   28.0   0.1    7.6  7  WD40      WD domain, G-beta repeat
    8.4e-05   22.6   0.0      0.073   13.1   0.0    3.4  4  BBS2_Mid  Ciliary BBSome complex subunit 2, middle region


Domain annotation for each model (and alignments):
>> PFU  PFU (PLAA family ubiquitin binding)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.2   1.3   1.6e-45   7.2e-42       2     112 ..     333     441 ..     332     442 .. 0.97

  Alignments for each domain:
  == domain 1  score: 142.2 bits;  conditional E-value: 1.6e-45
         PFU   2 pGkkeGqvklvkeeegkveayqwsaaeekWekiGevvgseessskkkeyeGkeYDyvfdvdiedgkpplkLpynksdnpyeaAekFleknelsqsyleq 100
                 pGk+eG+v++v+ + + veayqws+ e++W+k+G+vv++ + s++k+ y+G+eYDyvfdvd+++g+ plkLpyn+++np++aA +Fle+n+l++sy+++
  EPX73482.1 333 PGKHEGDVIMVRVN-NDVEAYQWSQVENDWKKVGQVVDAVG-SNRKQLYNGQEYDYVFDVDVAEGQAPLKLPYNVTENPFQAAIRFLETNHLPTSYTDE 429
                 8************9.9*********************9988.99******************************************************* PP

         PFU 101 ivnFiikntkga 112
                 +v+Fi+knt+g+
  EPX73482.1 430 VVQFIQKNTEGH 441
                 *********986 PP

>> PUL  PUL domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.8   6.6   4.3e-44   1.9e-40       6     273 ..     468     709 ..     464     712 .. 0.87

  Alignments for each domain:
  == domain 1  score: 138.8 bits;  conditional E-value: 4.3e-44
         PUL   6 yllfkkanldkllkKlkelNakllsagqkdlalsdeelatLeallaale..ssseat.qlelllklltsWppedrfPalDLlRlllldprvsayfaeee 101
                 yllf++an++++ k+l +lN+++        al + +l++L+++l++ +   s +    +e++l++l++ + ++rfPalD lRll+ d++   +++   
  EPX73482.1 468 YLLFTTANVSAMCKRLLSLNSTH------ANALPQGDLEKLQHILSMKSmkDS-DRQvAIEICLNVLDRFSLSERFPALDALRLLAIDCPQ--HLC--- 554
                 9******************9883......449**************8876333.3336******************************885..567... PP

         PUL 102 gg...ktissllslllssalsssapkalennrmlalRllaNlFssplgrelllskaeslletleslltssllssnknlrialatlllNlavllhkskde 197
                      ++ ++l +++++++      k ++ n+ml+lR laN+ s+ +  e +++ a+sl +t+  +      + +k  ++a+atl++Nl+vl++   ++
  EPX73482.1 555 -AvllEVFAQLAQSITVTG------KFESINSMLTLRGLANIVSNVSSEEDITKLANSLYKTVPGA------EYSKDYKVAFATLAMNLSVLYT---KK 637
                 .212234445555555555......557789**********************8777888887766......679******************8...77 PP

         PUL 198 lseedqvellaallealeeeeedsEalyRlLvAlGtlvyaapegealadlarvldakeivkkakkkafekeprvke 273
                 + ee+++e+l +l+++l+ ++++sE +yR+++AlG l++    ++++ ++ +v+d++++v+k++k af++e r++e
  EPX73482.1 638 SLEEAAIEILPVLTNFLAADSSESESCYRAVMALGSLCTL---SNVAIAASQVYDVRKTVEKISK-AFSQESRFQE 709
                 99***************999******************99...789*******************.999*****98 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.1     0.044     2e+02       5      35 ..       8      38 ..       5      41 .. 0.57
   2 ?    4.2   0.0      0.02        92       7      33 ..      52      84 ..      48      84 .. 0.74
   3 !   16.1   0.5   3.4e-06     0.015       9      38 .]     101     130 ..      94     130 .. 0.80
   4 !   24.7   0.1   6.5e-09   2.9e-05       1      38 []     132     169 ..     132     169 .. 0.89
   5 !   13.0   0.3   3.4e-05      0.15       3      38 .]     173     207 ..     171     207 .. 0.77
   6 !   28.0   0.1   6.1e-10   2.7e-06       2      38 .]     211     248 ..     210     248 .. 0.93
   7 !   10.1   0.1   0.00026       1.2      12      37 ..     262     286 ..     252     287 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.044
                EEEESS.SSEEEEEEETTSSEEE.EEETTSEEE CS
        WD40  5 rtltGH.ssvtslafspdgawla.sGsdDgtvr 35
                ++l GH ++v++++   + + l+ s+s+Dg+  
  EPX73482.1  8 KELLGHdQDVRGVCS-VS-DELIgSASRDGKYG 38
                5677**888666631.13.33442556787655 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.02
                EESS.SSEEEEE.....EETTSSEEEEEETTSE CS
        WD40  7 ltGH.ssvtsla.....fspdgawlasGsdDgt 33
                ++ H ++v+s++      s+ + +l+sG+ D++
  EPX73482.1 52 YEFHeGFVNSICyvppsDSKTKGFLFSGGQDCS 84
                6789888*****87555555555599**99985 PP

  == domain 3  score: 16.1 bits;  conditional E-value: 3.4e-06
                 SS.SS...EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   9 GH.ss...vtslafspdgawlasGsdDgtvriWd 38 
                 GH s+   v++l    d++ +++Gs+D t r+W+
  EPX73482.1 101 GHeSNvcsVHAL----DSTTIITGSWDSTARVWS 130
                 997664456677....888899***********5 PP

  == domain 4  score: 24.7 bits;  conditional E-value: 6.5e-09
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 gqc  +l+GH ssv+++    + +++ +Gs D+t++iW+
  EPX73482.1 132 GQCRLVLRGHeSSVWAVLALGEDSFV-TGSADKTIKIWK 169
                 7999******999****888888886.8**********6 PP

  == domain 5  score: 13.0 bits;  conditional E-value: 3.4e-05
                 EEEEEESS.SSEEEEEEETTSSE....EEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgaw....lasGsdDgtvriWd 38 
                  ++++ +H ++v+s++           +as+s Dg +++W+
  EPX73482.1 173 VVKSFVAHvDCVRSIC------KipqgFASCSNDGIIKLWS 207
                 578999**87788883......23334799**********5 PP

  == domain 6  score: 28.0 bits;  conditional E-value: 6.1e-10
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  +l++l GH s+v+sl + p+ ++las+++D++vr+W+
  EPX73482.1 211 HLLQELHGHtSFVYSLTYVPSLDLLASCGEDKSVRVWK 248
                 578999***888*************************6 PP

  == domain 7  score: 10.1 bits;  conditional E-value: 0.00026
                 SEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  12 svtslafspdgawlasGsdDgtvriW 37 
                 s++s+a  p+g+  ++Gs Dg vri+
  EPX73482.1 262 SIWSVAALPNGDI-TCGSSDGAVRIF 286
                 69***********.88988*****96 PP

>> BBS2_Mid  Ciliary BBSome complex subunit 2, middle region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.65   2.9e+03      41      72 ..      16      47 ..      11      50 .. 0.87
   2 ?   -2.8   0.0       1.4   6.3e+03      11      29 ..     113     131 ..     106     141 .. 0.72
   3 !   13.1   0.0   1.6e-05     0.073      11      65 ..     152     206 ..     144     213 .. 0.81
   4 !    4.9   0.0    0.0057        26      18      67 ..     238     288 ..     226     301 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.65
    BBS2_Mid 41 kvvslarlekerfayaleNGtvgvyekkerlW 72
                 v  ++++++e ++ a + G  g+++k+ + W
  EPX73482.1 16 DVRGVCSVSDELIGSASRDGKYGIWKKNGENW 47
                56778999999999999***********9999 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.4
    BBS2_Mid  11 geneLvvgsddfeirvfke 29 
                 +++ ++ gs d + rv++ 
  EPX73482.1 113 DSTTIITGSWDSTARVWSY 131
                 5677888888888887765 PP

  == domain 3  score: 13.1 bits;  conditional E-value: 1.6e-05
    BBS2_Mid  11 geneLvvgsddfeirvfkeeelvaeitetekvv.slarlekerfayaleNGtvgvy 65 
                 ge++ v gs d +i+++k++++v+ +  +  +v s++++ ++ fa   + G ++++
  EPX73482.1 152 GEDSFVTGSADKTIKIWKGDKVVKSFVAHVDCVrSICKI-PQGFASCSNDGIIKLW 206
                 7899********************998876665156666.5678888888888876 PP

  == domain 4  score: 4.9 bits;  conditional E-value: 0.0057
    BBS2_Mid  18 gsddfeirvfkeeelvaeite.tekvvslarlekerfayaleNGtvgvyek 67 
                 + +d ++rv+k+ + ++ i   t  + s+a+l + ++  + + G v ++  
  EPX73482.1 238 CGEDKSVRVWKDSKCIQRIALpTTSIWSVAALPNGDITCGSSDGAVRIFTI 288
                 679**********99999875388999*******************99975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (722 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       604  (0.0336884); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.62u 0.27s 00:00:00.89 Elapsed: 00:00:00.43
# Mc/sec: 5010.64
//
Query:       EPX73483.1  [L=752]
Description: Noc2p-Noc3p complex subunit Noc3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-26   91.1   0.3    4.5e-26   91.1   0.3    3.6  4  NOC3p       Nucleolar complex-associated protein
    3.1e-20   72.9   1.0    3.1e-20   72.9   1.0    3.9  3  CBF         CBF/Mak21 family
  ------ inclusion threshold ------
        6.1    7.2   8.6        1.1    9.5   0.6    3.3  3  TINF2_N     TERF1-interacting nuclear factor 2 N-terminus


Domain annotation for each model (and alignments):
>> NOC3p  Nucleolar complex-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.4   2.3         3   1.8e+04      60      82 ..      18      40 ..      13      44 .. 0.65
   2 !   91.1   0.3   7.5e-30   4.5e-26       2      94 .]     227     317 ..     226     317 .. 0.97
   3 ?   -3.0   0.2       1.8   1.1e+04      76      86 ..     464     474 ..     450     501 .. 0.54
   4 ?    0.4   0.0      0.16   9.4e+02      59      94 .]     612     645 ..     610     645 .. 0.77

  Alignments for each domain:
  == domain 1  score: -4.4 bits;  conditional E-value: 3
       NOC3p 60 rIrsltekekeekvskevkklre 82
                +I++++e++k++k   e k+l++
  EPX73483.1 18 KIKNIKESSKQKKNASEKKQLKK 40
                56777776666666666666554 PP

  == domain 2  score: 91.1 bits;  conditional E-value: 7.5e-30
       NOC3p   2 akeeiaslassiledPeenlsllkrllklaeskdsavtvrklallsllaVfkDiiPgYrIrsltekekeekvskevkklrefEqkLlkvYkky 94 
                  kee+asla+++le+Pee+l+ +k++++  +s    +t++kl+ll+ laVf+D+iPgYrIr+l+e+e+++k+skev++++++Eq+ lk+Y ++
  EPX73483.1 227 DKEELASLAQKLLEEPEESLHVFKSIFEKFQSPF--ITTKKLSLLTALAVFQDLIPGYRIRPLSEEEESTKLSKEVAQRWSYEQTFLKHYMRF 317
                 69**************************888888..9*****************************************************987 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 1.8
       NOC3p  76 evkklrefEqk 86 
                 + k+++e E++
  EPX73483.1 464 TLKETKEIEKE 474
                 33333333322 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.16
       NOC3p  59 YrIrsltekekeekvskevkklrefEqkLlkvYkky 94 
                 Y+++ l + +  +  +k+v +  +  ++Llk Y+++
  EPX73483.1 612 YKVNRLRDPD--APSKKNVVNASTQMEMLLKCYQSF 645
                 6666666433..478899999999999*******98 PP

>> CBF  CBF/Mak21 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?  -16.6  17.8         3   1.8e+04     149     149 ..     157     157 ..       9     237 .. 0.57
   2 ?    0.1   1.4      0.12     7e+02      47      72 ..     378     406 ..     342     494 .. 0.62
   3 !   72.9   1.0   5.1e-24   3.1e-20       3     170 .]     565     743 ..     563     743 .. 0.89

  Alignments for each domain:
  == domain 1  score: -16.6 bits;  conditional E-value: 3
         CBF 149 a 149
                 +
  EPX73483.1 157 E 157
                 3 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.12
         CBF  47 a...lllnllykalkadkpvkrvaAFvKR 72 
                     ++ln l   lk+d+  +  +  vK 
  EPX73483.1 378 NnfdMFLNSLAAILKEDNLGRVSMNCVKL 406
                 23446666666666555533333333333 PP

  == domain 3  score: 72.9 bits;  conditional E-value: 5.1e-24
         CBF   3 qaLvllfqllskq..kqsel...lsasdRFyraLYrkLld.........................pelltsskralllnlly......kalkadkpvkr 65 
                 ++++++f+++s+   ++ +l   ls+   F+++LYr++l                          + +++s++ ++ll++ +      k++    +++r
  EPX73483.1 565 LTVSTAFEIASAPgvNKLNLdldLSI---FIQRLYRLILPfslnpdadltykvnrlrdpdapskkNVVNASTQMEMLLKCYQsfffksKSV----SPAR 656
                 66788999999987654545889999...**********************************955566666788******9988877777....**** PP

         CBF  66 vaAFvKRllqlalhappsfalgllallsellkhppklkalleekfkdvkeeeeeekkeekkkskaesgvYdptkrdpeysnaeasslwElsllakhfhP 164
                 +aAF KRl+  +l++p++++++++all +l++   kl+ + +      +ee     +      ++ +g Y+p  +dpe ++++++ l+E  ll++h+ P
  EPX73483.1 657 LAAFSKRLAISSLQLPEHSSMAAIALLTRLVSRYTKLHRMFT------SEE-----Q------IG-DGIYQPFVEDPELCKSSTAMLYETFLLKNHYSP 737
                 ********************************888*******......554.....4......66.9*****99************************* PP

         CBF 165 tValfA 170
                 t+++ A
  EPX73483.1 738 TISRSA 743
                 **9876 PP

>> TINF2_N  TERF1-interacting nuclear factor 2 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.6   0.00019       1.1      75     115 ..     215     255 ..     184     280 .. 0.86
   2 ?   -0.0   0.0      0.17     1e+03       9      35 ..     311     337 ..     305     382 .. 0.79
   3 ?   -0.4   0.4      0.22   1.3e+03      56      97 ..     465     505 ..     434     517 .. 0.59

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00019
     TINF2_N  75 kstkkkdekveeaqenflklvqsLledpeerekflqeefpe 115
                 + + + ++++++ +e++++l q+Lle+pee  + ++  f++
  EPX73483.1 215 EPQLSPKQQIQADKEELASLAQKLLEEPEESLHVFKSIFEK 255
                 455667899**************************999985 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.17
     TINF2_N   9 veqyekleefvslvteavPeLlssrqk 35 
                  ++y +  e+++++ +  P L ++ qk
  EPX73483.1 311 LKHYMRFIEILESIFKSYPSLENDVQK 337
                 678888888888888888888666555 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.22
     TINF2_N  56 aadlkaiqshlerlrasaakstkkkdekveeaqenflklvqs 97 
                  +++k+i++ +++  a   +++++++ + e  ++ fl+  ++
  EPX73483.1 465 LKETKEIEKEMKEADAV-ISAEDREKYQAEVLKMVFLTYFKT 505
                 34455555555555553.344444444555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (752 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2390  (0.133304); expected 358.6 (0.02)
Passed bias filter:                      590  (0.0329076); expected 358.6 (0.02)
Passed Vit filter:                        75  (0.00418317); expected 17.9 (0.001)
Passed Fwd filter:                        29  (0.00161749); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.04u 0.38s 00:00:01.42 Elapsed: 00:00:00.63
# Mc/sec: 3602.80
//
Query:       EPX73484.1  [L=686]
Description: ClC chloride channel [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.9e-77  258.7  35.5    1.1e-75  255.1  29.4    2.1  2  Voltage_CLC  Voltage gated chloride channel
     0.0089   16.5   0.0        0.4   11.2   0.0    2.4  2  CBS          CBS domain
  ------ inclusion threshold ------
      0.069   13.1   0.7        1.2    9.1   0.0    2.8  2  SLATT_1      SMODS and SLOG-associating 2TM effector domain 1


Domain annotation for each model (and alignments):
>> Voltage_CLC  Voltage gated chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.3   0.00038       2.2     158     214 ..      31      86 ..       7     112 .. 0.76
   2 !  255.1  29.4   1.9e-79   1.1e-75       2     353 ..     116     490 ..     114     491 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.00038
                  .--GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCHHHHHHH.HHHHHHHHHH CS
  Voltage_CLC 158 alsllelilfvllGilgGllgalfvrlllkverlfrkleklkikkrl.epalvgllvg 214
                  + ++++l++ +l Gil+Gl  al + l+  ++++++ +   k++  l ++a +++l+ 
   EPX73484.1  31 NTKTKYLFVSILSGILIGLTTALLNGLTFLLSSFREGY--CKTNILLdKAACCAILTD 86 
                  578899999********************999988877..566678889998888874 PP

  == domain 2  score: 255.1 bits;  conditional E-value: 1.9e-79
                  HHHHHHHCCCCC-GGGSC-SHHHHHHHCTTSS--.....-HHHHHHHHHHHHHHHHCTT-S-BTHHHHHHHHHHHHHHHHHH...TT.--SHHHHHHH CS
  Voltage_CLC   2 ggllagllvklvapeaagsGipevkaalngvkgp.....lslrvllvkflasvltvgsGlslGreGplvqiGAavgsglsrl...lklsrndrdrrlv 91 
                  ++lla+ll  + +p  + sGipe+ka l+g   p      sl++ll+k l+ +l+v+sG  +G+eGp+v++++ ++ +++++   ++ ++n   r+++
   EPX73484.1 116 FALLASLLKVYSFPSVSASGIPEIKATLSGYTLPdansfYSLKTLLLKSLSICLCVASGIWVGKEGPFVHVASNIAILVASVfpeIS-KSNLYSRQIL 212
                  6788999877777*******************************************************************7754333.44554666** PP

                  HHHHHHHHHHHHT-HHHHHHHHCTTTS.TSS--...TTHHHHHHHHHHHHHHHHHHCTTS-S-.T..---....--GGGHHHHHHHHHHHHHHHHHHH CS
  Voltage_CLC  92 aaGaAAGiAAaFnaPlgGvlfalEevs.refsl...rallpvfvasvvaalvlrlllgeepafge..veslf.alsllelilfvllGilgGllgalfv 182
                  +a++++GiAA FnaP+gGvlfalE+v  ++f +    ++++ f++s+++ ++l+ll +++p  g   ++sl+ ++++l+l++f++++il+G+lg + v
   EPX73484.1 213 IAAISSGIAASFNAPVGGVLFALEQVTtSSFPSsltGSIWYEFLCSAFSVVTLQLLRSWQPGAGFlsFVSLErHWTYLDLLPFIFISILCGFLGSVLV 310
                  *************************7614454478899**********************99543223333358************************ PP

                  HHHHHHHHHHHCHHCHHHHHHHHHHHHHHHHHHHCCCSC.C..CSSSSCCHHHHHCTT-S-...........HHHHHH...HHHHHHHHHHHHHCTT- CS
  Voltage_CLC 183 rlllkverlfrkleklkikkrlepalvgllvgllglllp.a.svlgggyeliasllegstl...........llsllllllllllkllataltlgsgv 267
                  rl++k++  + +    + + ++ + ++++++ +++++     ++l +++el+ ++ +++++           +++ l+l+  +++ ll+t lt+g+++
   EPX73484.1 311 RLYMKTLAKYSSS--SRGYSVCSVGFLSFMTCFISVPALfDyDILYNPTELFFQISNSCSPssasilcevqpWITSLVLFASAIVGLLFTGLTYGMQI 406
                  *******988877..4555667888888888888877765667888888887777766665888899999999999999******************* PP

                  CSBSHHHHHHHHHHHHHHHHHHHHHH-CTSSC...HHHHHHCCTHHHHHCCS-HHHHHHHHHHCC--GCCHHHHHHHHHHHHHHHC CS
  Voltage_CLC 268 pgGifaPsLviGAalGrlvglvlalllpgaassdpgafalvGmaaflagvtrapltaiviviEltgdlelllplmlavliAkavad 353
                  pgGi++PsL+iGA+lGr++g++l +++p+ a s  +++a+vG+ afl+ +tr++++++vi+ Eltg+++++lplmla+l+++++++
   EPX73484.1 407 PGGILIPSLTIGACLGRCIGTILRSIFPSLAGS--TVYAIVGATAFLSSTTRLTVSLVVIIYELTGAFTVVLPLMLATLLSRWISN 490
                  ****************************65554..8***********************************************986 PP

>> CBS  CBS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0     0.034     2e+02      18      50 ..     543     576 ..     528     581 .. 0.73
   2 !   11.2   0.0   6.7e-05       0.4      11      53 ..     624     665 ..     614     667 .. 0.77

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.034
                 HHHHHHHHHHHT.SSEEEEE.ETTTBEEEEEEHHH CS
         CBS  18 leealelmrekg.vsrlPVV.dedgklvGivtlrD 50 
                 + +  + +++   +  + V+ d+ + +vG+++++ 
  EPX73484.1 543 INQMERAFKH-StYPYISVIkDKTDYFVGLISREK 576
                 4444455622.236666666898899******976 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 6.7e-05
                 EEETTSBHHHHHHHHHHHTSSEEEEEETTTBEEEEEEHHHHHH CS
         CBS  11 tvppdttleealelmrekgvsrlPVVdedgklvGivtlrDllr 53 
                 t++ dt+   +l+++re g++ +  +   gkl+Gi+t+ D+l+
  EPX73484.1 624 TLNSDTPPILILKMFREMGITVVALL-RRGKLHGIITKLDILE 665
                 66666666668888988667555556.79************96 PP

>> SLATT_1  SMODS and SLOG-associating 2TM effector domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.0    0.0002       1.2       2      45 ..      12      55 ..      10      64 .. 0.86
   2 ?    0.6   0.2     0.082   4.9e+02      24      73 ..     456     506 ..     447     509 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.0002
     SLATT_1  2 lreRveeqldwYrkkaeeneraakrwrlllillellalllaalr 45
                 r+  ++q +w+ ++ ++ + ++k +++ ++   l++l+ a+l+
  EPX73484.1 12 ERYKKQQQKSWFNDRFSFLNTKTKYLFVSILSGILIGLTTALLN 55
                4455567888*******************************998 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.082
     SLATT_1  24 akrwrlllillellalllaalr.afgelsvdlvgvlaavaaallaWlelkq 73 
                 + +++l++i+ el++++ ++l  ++ +l   ++  ++   +   +Wl+lk+
  EPX73484.1 456 RLTVSLVVIIYELTGAFTVVLPlMLATLLSRWISNFINPFSIYDSWLHLKK 506
                 4567889999*********99955555555899999888888888988887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (686 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       618  (0.0344693); expected 358.6 (0.02)
Passed bias filter:                      324  (0.0180713); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.70u 0.32s 00:00:01.02 Elapsed: 00:00:00.53
# Mc/sec: 3860.39
//
Query:       EPX73485.1  [L=143]
Description: AP-2 adaptor complex subunit Aps2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-54  184.0   2.1    1.4e-54  183.9   2.1    1.0  1  Clat_adaptor_s  Clathrin adaptor complex small chain


Domain annotation for each model (and alignments):
>> Clat_adaptor_s  Clathrin adaptor complex small chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  183.9   2.1   7.7e-59   1.4e-54       1     141 [.       1     142 [.       1     143 [] 0.98

  Alignments for each domain:
  == domain 1  score: 183.9 bits;  conditional E-value: 7.7e-59
                     -EEEEEEE-TTS-EEEEEESSSS-CHHHHHHHHHHHHHHHTT-SSS.-SEEEETTEEEEEEEETTEEEEEEEETTS-HHHHHHHHHHHHHHHHHH CS
  Clat_adaptor_s   1 mikaililnkkgkvrlakfytavddkkkqklieevyelvsaRdskl.sniveledlkviYkryasLYFvvivdeqeneliilelihlfvesLdky 94 
                     mi+++l++n++gk rl k+y+++dd++k ++  ++++l+s+R +k+ +n++e+++ k++Y+rya+LYF+++vd+ +n+l++le+ih fve Ld +
      EPX73485.1   1 MIQFVLVQNRHGKNRLSKYYVPFDDVEKTQVKSQIHRLISQRTQKYqANFLEWRNSKLVYRRYAGLYFCFCVDTSDNDLAVLEMIHFFVEILDSF 95 
                     89****************************************999879*********************************************** PP

                     CTS-SHHHHHHCHHHHHHHHHCCEETTEES---HHHHHHCHHHHHHH CS
  Clat_adaptor_s  95 fgnVceldlvfnfekvylildEivsgGeiletskkevlkrvelldkl 141
                     fgnVceldl+fnf+kv +ildEi+ gGei e++k+ +l+r+e ldkl
      EPX73485.1  96 FGNVCELDLIFNFYKVSAILDEIILGGEIGESNKTALLERIEALDKL 142
                     ********************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       594  (0.0331307); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.30s 00:00:00.69 Elapsed: 00:00:00.44
# Mc/sec: 987.10
//
Query:       EPX73486.1  [L=160]
Description: pig-H [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.8e-21   73.4   0.0    1.5e-20   72.8   0.0    1.3  1  PIG-H            GPI-GlcNAc transferase complex, PIG-H compon
  ------ inclusion threshold ------
      0.084   12.1   0.6      0.097   11.9   0.6    1.1  1  ABC2_membrane_2  ABC-2 family transporter protein


Domain annotation for each model (and alignments):
>> PIG-H  GPI-GlcNAc transferase complex, PIG-H component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.8   0.0   1.7e-24   1.5e-20       1      72 []      72     136 ..      72     136 .. 0.97

  Alignments for each domain:
  == domain 1  score: 72.8 bits;  conditional E-value: 1.7e-24
       PIG-H   1 SllvlrglGvQlsssylsrllpfsggtsrrFiplekirdvvInEafkgfeViyyLaivvegeeekklvvvFp 72 
                 Sllv+r+lG+Q++ +       +++++s++ ipl++ir+++I+Eaf++f V yy+ i +e e +  ++vvFp
  EPX73486.1  72 SLLVVRDLGIQTNCH-----SIVPWKSSSKLIPLDSIREIFIHEAFRKFDVCYYMGIAIEREPQ--IHVVFP 136
                 9**************.....688**************************************998..*****8 PP

>> ABC2_membrane_2  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.6   1.1e-05     0.097     168     215 ..      23      67 ..       9      99 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 1.1e-05
  ABC2_membrane_2 168 svlllllvvflalglllSsvarssreaaalalglfvvlailvpivlyg 215
                      ++++++  +fl+++++++ +a + + +++l+++  ++l+ l++i++ g
       EPX73486.1  23 TQMFAI--CFLSFSVGVALLAFEPAPSLLLWISGAIFLSSLFQIIS-G 67 
                      444455..9***********************************98.4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       471  (0.0262703); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1250.28
//
Query:       EPX73487.1  [L=288]
Description: 40S ribosomal protein S0A [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.7e-27   96.0   0.6    1.7e-13   50.3   0.1    2.2  2  Ribosomal_S2  Ribosomal protein S2
    1.1e-08   36.3  13.3      2e-08   35.5  13.3    1.4  1  40S_SA_C      40S ribosomal protein SA C-terminus


Domain annotation for each model (and alignments):
>> Ribosomal_S2  Ribosomal protein S2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.7   0.0   9.9e-16   8.8e-12       1      98 [.      20     115 ..      20     119 .. 0.93
   2 !   50.3   0.1   1.9e-17   1.7e-13     145     212 ..     117     184 ..     114     186 .. 0.94

  Alignments for each domain:
  == domain 1  score: 44.7 bits;  conditional E-value: 9.9e-16
  Ribosomal_S2   1 LLeagvhfGhqtrrwnpkmkpyIygern.gihiidlektlaalrraykvvkevaakggkilfvgtkkqakeavkeaakrangyyvnerWlgGtLTNf 96 
                   LL+a  h+G   ++ + +m py+ ++rn g+hii++ kt ++l  a++++  ++++   +  v+t+   ++av + a+ +++  +  r+++G +TN+
    EPX73487.1  20 LLAASSHIGS--KNLEVRMDPYVWKRRNdGVHIINVGKTWEKLVLAARIIA-TVENPADVCVVSTRAYGHRAVLKFAAHTGATAIAGRFTPGNFTNY 113
                   89*******5..677999******999768******************997.7899****************************************8 PP

  Ribosomal_S2  97 kt 98 
                    t
    EPX73487.1 114 IT 115
                   65 PP

  == domain 2  score: 50.3 bits;  conditional E-value: 1.9e-17
  Ribosomal_S2 145 mkklPdlvvvldpkkekiavkEakklgipviaivDtnvdpdlvdypIpaNddsirsiklilgvladai 212
                     + P l++v+dp+ +  a++Ea+ ++ipvia+ Dt++  + +d +Ip N++  +si l   +la+ +
    EPX73487.1 117 TYREPRLIIVTDPRADAQAIREASFVNIPVIALADTDSCLNHIDVAIPTNNKGRKSIGLAWYLLAREV 184
                   5678*******************************************************999999876 PP

>> 40S_SA_C  40S ribosomal protein SA C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.5  13.3   2.2e-12     2e-08       1      95 []     204     287 ..     204     287 .. 0.63

  Alignments for each domain:
  == domain 1  score: 35.5 bits;  conditional E-value: 2.2e-12
    40S_SA_C   1 fFYRdPEeiekeeqaaaekalvkkeeqeewtapveftepevadWaeegvavpsvpaaaaaaaae.vkaaedwsaqpatedWsaaptaaaeatseWg 95 
                 +FYRdPEe+e+ee a++ +a + +e   ++ + +     ++a+++++  a+++v  +  aaa++    ++ w+ +    +W+++   aa++ts+W+
  EPX73487.1 204 YFYRDPEEVEREEEAKKAAAIASEEA--QVEEAA-----AAAEFDVNDSAAGAVDPTVLAAATAgQVGENTWEGTG---EWNTTG--AAAQTSDWA 287
                 9*************999998555554..333333.....4566666666666666655555333033455677766...***433..344899*95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       611  (0.0340789); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2071.53
//
Query:       EPX73488.1  [L=136]
Description: 60S ribosomal protein L27 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.8e-37  127.5   3.0    2.3e-37  127.2   3.0    1.1  1  Ribosomal_L27e  Ribosomal L27e protein family
  ------ inclusion threshold ------
      0.023   14.7   0.2      0.051   13.5   0.2    1.7  1  KOW             KOW motif


Domain annotation for each model (and alignments):
>> Ribosomal_L27e  Ribosomal L27e protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.2   3.0   2.6e-41   2.3e-37       1      85 []      52     136 .]      52     136 .] 1.00

  Alignments for each domain:
  == domain 1  score: 127.2 bits;  conditional E-value: 2.6e-41
  Ribosomal_L27e   1 kVtkkmskkkiakrskikpFvKvvnynhlmpTRYtvdvedlkelvkkealkdpakrkeakkevkkkfeeryksgknkwffkkLrF 85 
                     kVtk+m++k+iakrs++kpF++vvnynhlmpTRY++++ +lk+lv+ e++k+p++r++akk +kk+fee+y++gk++wff++LrF
      EPX73488.1  52 KVTKSMGAKRIAKRSRVKPFIRVVNYNHLMPTRYALELDNLKNLVSAETFKEPSQRSAAKKVIKKTFEEKYQTGKSAWFFTPLRF 136
                     9***********************************************************************************9 PP

>> KOW  KOW motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.2   5.7e-06     0.051       1      16 [.       7      22 ..       7      45 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 5.7e-06
                TTSEEEESSSTTTTCE CS
         KOW  1 pGdhVkVvsGphkGkt 16
                pG++  +++G+++Gk+
  EPX73488.1  7 PGKVALITRGRFAGKK 22
                8*************64 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       440  (0.0245412); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1080.64
//
Query:       EPX73489.1  [L=95]
Description: hypothetical protein SOCG_02713 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.043   13.8   0.1      0.084   12.8   0.1    1.6  1  Peptidase_S24  Peptidase S24-like
       0.11   12.8   0.0       0.19   12.0   0.0    1.4  1  SH3_3          Bacterial SH3 domain


Domain annotation for each model (and alignments):
>> Peptidase_S24  Peptidase S24-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   9.4e-06     0.084       7      39 ..      42      88 ..      36      93 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 9.4e-06
                   T.CCTXXTTXEEEEECTS.............---TTSEEEEEETTCE CS
  Peptidase_S24  7 M.eptlldGdlilVdkfs.............epkrGdivvfrlpgee 39
                   M   tl++Gd++ V++++              ++ Gd   ++ p +e
     EPX73489.1 42 MkIGTLQNGDYVTVEPSAwskivvsentdyaFANEGDEFLVQQPSDE 88
                   64479*************99999999999999999999999999887 PP

>> SH3_3  Bacterial SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   2.1e-05      0.19      12      40 ..      40      66 ..      37      78 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.1e-05
       SH3_3 12 ssevigtlpyGekVevleetgggeWykv..r 40
                ++ +igtl++G+ V+v  e     W k+   
  EPX73489.1 40 NAMKIGTLQNGDYVTV--EPSA--WSKIvvS 66
                789*************..8888..9999432 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       820  (0.045736); expected 358.6 (0.02)
Passed bias filter:                      599  (0.0334096); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.27s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 735.67
//
Query:       EPX73490.1  [L=520]
Description: origin recognition complex subunit Orc2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.1e-96  321.5   1.5    6.5e-96  321.1   1.5    1.1  1  ORC2      Origin recognition complex subunit 2


Domain annotation for each model (and alignments):
>> ORC2  Origin recognition complex subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  321.1   1.5  3.6e-100   6.5e-96       1     328 [.     189     504 ..     189     507 .. 0.95

  Alignments for each domain:
  == domain 1  score: 321.1 bits;  conditional E-value: 3.6e-100
                 XXXXXXXXX-TTTHHHHHHHHHHHHHSHHHHHHHHHHHGGGHHHHHHHHHTT-EEEE--SS--HHHHHHHHSSS----SSS-EEEE----TT--SHHHH CS
        ORC2   1 SnntlsslplLdeeeyerlleklkdthekekekLeklhkklfpqwlfeLeqGFslllyGvGSKrklleeFaeellskrkdgpvvvvnGylpsltlkdil 99 
                 S+ntls+lpl+d++ y + ++k+  ++ + +++L + ++++f+qw++e   G++ll+yG+GSK+++l +F+e+ ++     pv v++Gy+p+l+lk++l
  EPX73490.1 189 SSNTLSQLPLVDNQLYLETIQKTVLENDRFTQTLVHFQSRNFQQWYCEAMFGYNLLFYGFGSKEHFLSTFIEQKFH---GFPVFVIKGYFPHLQLKSVL 284
                 89********************9999999********************************************999...8******************* PP

                 HHHHHTT--S.---SSS--HHHHHHHHHHHHHS--S-..S--EEEES-SSSTTTTSHHHHHHHHTTTT-SSSEEEEE--STTHHHH--HHHHTTS-EEE CS
        ORC2 100 seiasallekkeakklsssvaaqlekilslleekeseeksklylvihniDgpsLrkekaqalLarLaaipqIhliasiDhinapllwdssklsqfnfvf 198
                 s+  + +le      +++sv ++l++ l++l+++e+   +k+++++hniDg+ L +e++q++La++aa+p++++ as+Dh+n+pllwdss +s fnfv+
  EPX73490.1 285 SAFLE-FLEV---VPSTASVPDMLQQALAVLDSNERA-FDKVIIMVHNIDGEDLVDERFQSALANIAASPNVYFFASVDHVNFPLLWDSSLESLFNFVM 378
                 ****6.5555...57789***************9998.59*********************************************************** PP

                 ---------GGGGGG--.-TT---.--.----HHHHHHHHHHS-HHHHHHHHHHHHHHHT--------------------BHHHHHHHHHHS--SSSGG CS
        ORC2 199 hdvtTfapysaElsfedevlellgrskrrvggkegakfVLkSLtenarklfklLveeqLekkeseekkekskkgseeagveykelynkareefivssem 297
                 hd+tTfa y  E+++e+++   ++  ++ + +++++k+VL SL+ n+r++fklL+ +qLe +  +  ++++ + se++g+eyk +y+k+++ef++s+e+
  EPX73490.1 379 HDATTFARYFNETTYENSL-GIGR--ANVSNKEKAIKHVLYSLPANSREIFKLLLIHQLE-RLVDFGDSTAVRPSEKVGIEYKVFYQKCSSEFLCSNEL 473
                 ****************944.4444..4679999***************************.788999999***************************** PP

                 GHHHHHHHHTTTTSS-B--------BB--S- CS
        ORC2 298 alrtlLkEFkDHklikskkdasgtevlsipl 328
                 ++r++L+EF DH++i++k+d  ++e+l+ip 
  EPX73490.1 474 NFRSQLTEFFDHHIIEMKRDFTNSEILWIPH 504
                 *****************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (520 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       633  (0.0353059); expected 358.6 (0.02)
Passed bias filter:                      429  (0.0239277); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 3648.76
//
Query:       EPX73491.1  [L=422]
Description: inositol phosphosphingolipid phospholipase C [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.1e-16   59.2   0.1    5.2e-16   58.9   0.1    1.1  1  Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family
  ------ inclusion threshold ------
        0.1   12.4   0.0       0.24   11.3   0.0    1.5  1  UPF0728        Uncharacterised protein family UPF0728


Domain annotation for each model (and alignments):
>> Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.9   0.1   5.8e-20   5.2e-16       2     216 ..      15     275 ..      14     291 .. 0.86

  Alignments for each domain:
  == domain 1  score: 58.9 bits;  conditional E-value: 5.8e-20
                    EEEESTG...CHHHHTHHHHHHHHHHHHHHCTTSEEEEEEEBSCTCHHHHHHHHH....TTCEEEEECCHECSSSTTSSEEEEEECSTEEEEEEEE CS
                    xxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos   2 twNvngq...aspalgssrrsdrladlltaydaDvlgLQEvdddelsriplllal....ggflgasstsptgggggggnggavlsrfpltslfrrt 90 
                    ++N++g    +++   ++ r + + + l+++d D+++LQEv+  + ++   ++      +    +      ++  + g g+a++srfp+ +    +
     EPX73491.1  15 SFNCWGLrfvSKY---RTERLKEIGKKLANSDYDIVLLQEVWSIHDFNEIRTQVSgnlvY----SRF----FHSAAMGAGLAMFSRFPIIESAMCK 99 
                    8999999888777...56688888888888899************999888888655431....333....4567********************* PP

                    EEETSSSSGCEEEEEEEEEEEEEEE....................CCCHHGHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-SSSTSGGGBSCGH CS
                    xxxxxxxxxxxxxxxxxxxxxxxxx....................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos  91 fiefndlvaalrreplaakleqlni....................ashrdhdlvrdlqllalllqvealnadrgapvivaGDfNarpsdddsrvlr 166
                    ++ ++++ a +r  + ++k++                          ++d +l ++l +++   ++++   +rg+ vi aGDfN  p + +   ++
     EPX73491.1 100 YPLNGRPQAFWRGDWYVGKGVATASlqhpsgktislfnthlhapyGKGPDTYLCHRLFQAWFISKLLRSAVQRGHIVIAAGDFNIQPLSVPHEIIT 195
                    *******************************************999999999999999999999999999999999999***************** PP

                    HHHHHCTTTH..................H............SSCESCETTTTTTTTTTTEB-BEEEEEECHHHCCEEEEE CS
                    xxxxxxxxxx..................x............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos 167 trglalapap..................v............glyllgggptptyvtraggsrlDrilaspalalfrsgvl 216
                    + gl  + ++                                l++++ ++    +  +   rlD+++ sp+  + +++ +
     EPX73491.1 196 SYGLVQDAWLtvhpeqathppnryamsdQelvdiagatcdsRLNSWRENISSKDMDDFVAKRLDYVFHSPSTSTATRSKV 275
                    **********9888888777776666550556777889999*****************************6666665544 PP

>> UPF0728  Uncharacterised protein family UPF0728
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   2.7e-05      0.24      20      63 ..      25      72 ..      19      81 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 2.7e-05
     UPF0728 20 vkhrterleglqavlkkdGheveLek....tedynvvelvvngetvfq 63
                 k+rterl+++ ++l+++ + ++L +    ++d+n +   v+g+ v++
  EPX73491.1 25 SKYRTERLKEIGKKLANSDYDIVLLQevwsIHDFNEIRTQVSGNLVYS 72
                58*******************98854344489************9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (422 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       754  (0.0420548); expected 358.6 (0.02)
Passed bias filter:                      595  (0.0331865); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.73u 0.37s 00:00:01.10 Elapsed: 00:00:00.61
# Mc/sec: 2100.89
//
Query:       EPX73492.1  [L=302]
Description: ski complex subunit Rec14 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.7e-21   74.5  14.5    0.00012   22.7   0.0    7.1  7  WD40         WD domain, G-beta repeat
    5.1e-11   42.7   0.0     0.0013   18.9   0.0    3.5  3  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
     0.0003   21.0   1.0       0.18   12.2   0.0    4.3  5  Kelch_6      Kelch motif
     0.0005   20.0   0.1       0.12   12.2   0.0    3.0  3  eIF2A        Eukaryotic translation initiation factor eIF2A
     0.0042   17.1   0.2        1.5    9.0   0.0    3.2  3  DUF1500      Protein of unknown function (DUF1500)
     0.0056   15.4   0.0        2.5    6.6   0.0    2.6  3  Nup160       Nucleoporin Nup120/160


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.2   0.00031      0.92       9      38 .]      14      42 ..       5      42 .. 0.81
   2 ?    2.5   0.0       0.1   3.1e+02      19      38 .]      68      87 ..      54      87 .. 0.76
   3 !    9.4   0.4   0.00066         2      10      38 .]     102     131 ..      92     131 .. 0.79
   4 !    8.3   0.0    0.0015       4.4      17      29 ..     142     164 ..     132     171 .. 0.69
   5 !   20.3   0.0   2.4e-07   0.00073       2      38 .]     178     215 ..     177     215 .. 0.86
   6 !   22.7   0.0   4.1e-08   0.00012       2      38 .]     220     257 ..     219     257 .. 0.93
   7 ?    4.8   0.0     0.019        58      12      34 ..     273     293 ..     262     297 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00031
                SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  9 GH.ssvtslafspdgawlasGsdDgtvriWd 38
                +H  +++sl++ +   w  s+s D +++ W+
  EPX73492.1 14 AHeADIYSLCVISGRLW--SCSGDSKIKQWN 42
                79888****99999999..4544*******8 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.1
                ETTSSEEEEEETTSEEEEEE CS
        WD40 19 spdgawlasGsdDgtvriWd 38
                s + ++++s++  + v++Wd
  EPX73492.1 68 SLEERLVVSCGFGQDVYLWD 87
                556677999988*******9 PP

  == domain 3  score: 9.4 bits;  conditional E-value: 0.00066
                 S.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS
        WD40  10 H.ssvtslafspdgawla.sGsdDgtvriWd 38 
                 H +  ++ ++spd + ++ + + Dg v +Wd
  EPX73492.1 102 HpGECWAACVSPDAQTISfT-TVDGRVCVWD 131
                 6555778889******9635.56*******9 PP

  == domain 4  score: 8.3 bits;  conditional E-value: 0.0015
                 E..........EETTSSEEEEEE CS
        WD40  17 a..........fspdgawlasGs 29 
                 +          +sp+g+++asG+
  EPX73492.1 142 DtkgkfglctaYSPNGRFIASGH 164
                 45555555566***********8 PP

  == domain 5  score: 20.3 bits;  conditional E-value: 2.4e-07
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++ +tl+GH  + +slafsp +++la+++d + + ++d
  EPX73492.1 178 RLFHTLSGHtLPLRSLAFSPGSSLLAAAGDSKMITVYD 215
                 689******7779*************999787777776 PP

  == domain 6  score: 22.7 bits;  conditional E-value: 4.1e-08
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++++ l+GH  ++ +laf+p g++l+s++  g v++Wd
  EPX73492.1 220 DQVGQLRGHgAWIFALAFNPVGDLLLSADIEGRVKVWD 257
                 67889****888**************9999*******9 PP

  == domain 7  score: 4.8 bits;  conditional E-value: 0.019
                 SEEEEEEETTSSEEEEEETTSEE CS
        WD40  12 svtslafspdgawlasGsdDgtv 34 
                 +++++a+  +g  + +G  D+++
  EPX73492.1 273 GIWAVAWYNNGFVV-AGA-DRSI 293
                 49999887777776.599.**99 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   4.7e-07    0.0014       6      78 ..     114     185 ..     109     189 .. 0.77
   2 !    8.0   0.0    0.0011       3.4      39      76 ..     188     225 ..     183     230 .. 0.88
   3 !   18.9   0.0   4.5e-07    0.0013       2      90 ..     194     280 ..     193     282 .. 0.90

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 4.7e-07
  ANAPC4_WD40   6 tmDLiAlatedgellvfRl.ngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsv 78 
                      i++ t dg++ v  + +  +v +l  d++++   + a++p+g+++a +++ g++ l++ e+g++ h+ls 
   EPX73492.1 114 DAQTISFTTVDGRVCVWDThSNSKVADL--DTKGKFGLCTAYSPNGRFIASGHQTGQLFLISTETGRLFHTLSG 185
                  5555667777777777665355677777..55555566789*****************************9875 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0011
  ANAPC4_WD40  39 sevrsLaWkpdgklLavaysdgevrlldaesgkvvhsl 76 
                     rsLa++p  +lLa a +   + ++d+ sg+ v +l
   EPX73492.1 188 LPLRSLAFSPGSSLLAAAGDSKMITVYDVVSGDQVGQL 225
                  6789****************************998776 PP

  == domain 3  score: 18.9 bits;  conditional E-value: 4.5e-07
  ANAPC4_WD40   2 swcptmDLiAlatedgellvfRl.ngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  +++p   L+A a +++ + v+ + +g +v +l   +++  + +La++p g lL  a  +g+v++ d+ + +++++ +  +   +  + W 
   EPX73492.1 194 AFSPGSSLLAAAGDSKMITVYDVvSGDQVGQL--RGHGAWIFALAFNPVGDLLLSADIEGRVKVWDMDTMECISTKNEVEG-GIWAVAWY 280
                  799999**************987699******..8*************************************998776666.48888886 PP

>> Kelch_6  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0     0.033        99       5      49 ..      20      57 ..      18      58 .. 0.86
   2 !   12.2   0.0   5.9e-05      0.18       8      45 ..      67      98 ..      63     104 .. 0.86
   3 ?   -1.2   0.0      0.97   2.9e+03       9      33 ..     122     130 ..     118     138 .. 0.57
   4 ?   -1.2   0.0      0.98   2.9e+03       8      37 ..     195     218 ..     190     220 .. 0.74
   5 ?   -3.5   0.0       5.1   1.5e+04      29      39 ..     252     262 ..     251     263 .. 0.79

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.033
     Kelch_6  5 hslvsvggkiYifGGytdsspylnkvwvydpetksWeqlpplpvp 49
                +sl+++ g+++ ++G        +k+  +++++   e ++ + +p
  EPX73492.1 20 YSLCVISGRLWSCSGD-------SKIKQWNVDSAEHELVEEIDTP 57
                589999*********9.......8999999999999888877665 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 5.9e-05
     Kelch_6  8 vsvggkiYifGGytdsspylnkvwvydpetksWeqlpp 45
                +s  +++++ +G ++      +v+++dp+t++ + l++
  EPX73492.1 67 ASLEERLVVSCGFGQ------DVYLWDPSTNTSRSLGD 98
                78999*********7......99*********999885 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 0.97
     Kelch_6   9 svggkiYifGGytdsspylnkvwvy 33 
                 +v+g+++                v+
  EPX73492.1 122 TVDGRVC----------------VW 130
                 5555555................55 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 0.98
     Kelch_6   8 vsvggkiYifGGytdsspylnkvwvydpet 37 
                 +s+g+++ ++ G +      +++ vyd+ +
  EPX73492.1 195 FSPGSSLLAAAGDS------KMITVYDVVS 218
                 67777777777775......7889999877 PP

  == domain 5  score: -3.5 bits;  conditional E-value: 5.1
     Kelch_6  29 kvwvydpetks 39 
                 +v v+d++t+ 
  EPX73492.1 252 RVKVWDMDTME 262
                 68899999975 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.27     8e+02     106     122 ..      65      81 ..      10      96 .. 0.68
   2 ?    4.0   0.0     0.013        39     120     159 ..     120     161 ..     115     189 .. 0.80
   3 !   12.2   0.0     4e-05      0.12      85     155 ..     211     283 ..     165     292 .. 0.74

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.27
                 EEE-TTSSEEEEE-TTS CS
       eIF2A 106 iffspkgklvllaGfgn 122
                 +  s +++lv+ +Gfg+
  EPX73492.1  65 MAASLEERLVVSCGFGQ 81 
                 44556677777777775 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.013
                 TTSSS-EEEEEETTTTEEEEEEE-T..T--EEEE-TTSSEEE CS
       eIF2A 120 fgnlaGeleiwdvkkkkkiakaeaa..natlvewspdgryvl 159
                 f  + G++ +wd+++ +k+a ++ +        +sp+gr+++
  EPX73492.1 120 FTTVDGRVCVWDTHSNSKVADLDTKgkFGLCTAYSPNGRFIA 161
                 77889*********9999998776511455678999999986 PP

  == domain 3  score: 12.2 bits;  conditional E-value: 4e-05
                 EEEEEC.SCEEEEEEEEES-..-EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-TT--..EEEE-TTS CS
       eIF2A  85 vslfdl.kvkviskleeqkr..NtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakaeaanat..lvewspdg 155
                 ++++d+  ++++ +l+ + +   ++ f+p g l+l a   +++G++++wd++++++i++ ++ +     v w ++g
  EPX73492.1 211 ITVYDVvSGDQVGQLRGHGAwiFALAFNPVGDLLLSA---DIEGRVKVWDMDTMECISTKNEVEGGiwAVAWYNNG 283
                 55666534666666655443114689*********99...689**************9988876541145666666 PP

>> DUF1500  Protein of unknown function (DUF1500)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.019        57      59      87 ..      33      61 ..      17      68 .. 0.85
   2 !    9.0   0.0   0.00049       1.5      47      77 ..     236     266 ..     228     276 .. 0.84
   3 ?   -0.6   0.0      0.47   1.4e+03      20      37 ..     278     295 ..     272     298 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.019
     DUF1500 59 pnesrvkqwvmdtlngimmnerdvsvsvg 87
                  +s++kqw +d+ +  +++e d    +g
  EPX73492.1 33 SGDSKIKQWNVDSAEHELVEEIDTPHKIG 61
                5689**********999999999876666 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00049
     DUF1500  47 avipfddivrtmpnesrvkqwvmdtlngimm 77 
                 a  p+ d++ +   e rvk w mdt++ i  
  EPX73492.1 236 AFNPVGDLLLSADIEGRVKVWDMDTMECIST 266
                 56788999999999************99965 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.47
     DUF1500  20 hyynkrfivygrsnailh 37 
                  +yn+ f+v g   +il 
  EPX73492.1 278 AWYNNGFVVAGADRSILW 295
                 589********9999985 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.28   8.5e+02     236     258 ..      32      54 ..      16      70 .. 0.75
   2 !    5.8   0.0    0.0015       4.3     223     285 ..     108     173 ..      87     226 .. 0.75
   3 !    6.6   0.0   0.00084       2.5     233     256 ..     244     267 ..     238     271 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.28
                 EETT-EEEEEETTTTEEEEEEE- CS
      Nup160 236 lsrdgkLrvWnlltgkclatidl 258
                  s d k++ Wn++++ +  + ++
  EPX73492.1  32 CSGDSKIKQWNVDSAEHELVEEI 54 
                 56799999999999876544443 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0015
                 T.....TTTEEEEEETT-EEEEEETTTTEEEEEEE--......-SSSTTS--SSEESEEESSSSEEEE CS
      Nup160 223 vavveigqtylfalsrdgkLrvWnlltgkclatidll.....rdeeaqdessskstldpaesslirvs 285
                  a+v+ + +++   ++dg++ vW++ +++ +a  d++      ++++++ +  +  +++++ +l  +s
  EPX73492.1 108 AACVSPDAQTISFTTVDGRVCVWDTHSNSKVADLDTKgkfglCTAYSPNGRFIA--SGHQTGQLFLIS 173
                 67888888899999*****************99999877777556777666655..444444444444 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.00084
                 EEEEETT-EEEEEETTTTEEEEEE CS
      Nup160 233 lfalsrdgkLrvWnlltgkclati 256
                 l+++   g+++vW+ +t+ c++t+
  EPX73492.1 244 LLSADIEGRVKVWDMDTMECISTK 267
                 667777899*************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       337  (0.0187964); expected 358.6 (0.02)
Passed bias filter:                      312  (0.017402); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.65u 0.36s 00:00:01.01 Elapsed: 00:00:00.57
# Mc/sec: 1590.73
//
Query:       EPX73493.1  [L=91]
Description: hypothetical protein SOCG_04949 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.8e-20   70.7   0.0    7.7e-20   70.6   0.0    1.1  1  Gemin7    Gem-associated protein 7 (Gemin7)


Domain annotation for each model (and alignments):
>> Gemin7  Gem-associated protein 7 (Gemin7)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.6   0.0   4.3e-24   7.7e-20       6      75 ..      10      81 ..       5      82 .. 0.91

  Alignments for each domain:
  == domain 1  score: 70.6 bits;  conditional E-value: 4.3e-24
      Gemin7  6 rafLRerfLrslkalvg..kpveftllektevsaefkgvdideenflVenLqTplGtikeAllRssDiisis 75
                 +++R+r+Lr++ +++     + ++l++++ev+aef g+d +e++++V+ L+T++Gt+++A++R+ Di++i+
  EPX73493.1 10 AFQQRMRTLRFYRKMSLstPTIVLYLHNQKEVQAEFSGIDSSESKVAVSHLHTDWGTVDKAVIRAGDIVNIE 81
                6889**********987435678899*******************************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       451  (0.0251548); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.33s 00:00:00.89 Elapsed: 00:00:00.62
# Mc/sec: 443.56
//
Query:       EPX73494.1  [L=159]
Description: glutathione peroxidase Gpx1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-45  152.6   0.2      3e-45  152.2   0.2    1.1  1  GSHPx     Glutathione peroxidase
    9.5e-06   25.5   0.0    1.5e-05   24.9   0.0    1.5  1  AhpC-TSA  AhpC/TSA family
    0.00015   21.5   0.0    0.00045   20.0   0.0    1.8  1  Redoxin   Redoxin


Domain annotation for each model (and alignments):
>> GSHPx  Glutathione peroxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.2   0.2   5.1e-49     3e-45       1     108 []       5     112 ..       5     112 .. 0.99

  Alignments for each domain:
  == domain 1  score: 152.2 bits;  conditional E-value: 5.1e-49
                 GGGBEEEBTTSSEEEGGGGTTSEEEEEEEESSSTTHHHHHHHHHHHHHHGGGTEEEEEEEE-TTTT---S-GGGHHHTSSHTTT-SSEEB--BBSSSTT CS
       GSHPx   1 iyelsakdidgekvkleklrgkvvlivnvaskCglteqykeleelqkrykdkglvilgfPCnqfgkqepgsdeeikkfrqgkyevtfellekievnGek 99 
                 +y++++ d  g+++++++l+gkvvl+vn askCg+t+q++ le+l++++kd+gl+++gfPCnqfg qepg++ee+ +f+q++y+vtf++l+ki+vnG++
  EPX73494.1   5 FYDFAPLDRTGKPFPFSELKGKVVLVVNTASKCGFTPQFQGLESLYQKFKDRGLMVIGFPCNQFGGQEPGNNEEVGEFCQKNYGVTFPVLSKINVNGDN 103
                 7************************************************************************************************** PP

                 B-HHHHHHH CS
       GSHPx 100 edplykflk 108
                  dp+y++lk
  EPX73494.1 104 VDPVYQYLK 112
                 *******98 PP

>> AhpC-TSA  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.0   2.6e-09   1.5e-05       6      88 ..       6      95 ..       2     147 .. 0.82

  Alignments for each domain:
  == domain 1  score: 24.9 bits;  conditional E-value: 2.6e-09
                ---EEESTTCEEEECHHHTTSEEEEEEESTST-CCHHHHHHHHHHCHHHCCCTTEEEEEEESSSCH........HHHHHHHH-H..SSEEEE CS
    AhpC-TSA  6 pdfelknadgetvslsdykgkpvvlffypkdwcpvCttelpalaklyeefkergvevigvsvdspe........shkkfiekes.lnfplls 88
                 df   +  g+++ +s++kgk+v+++ +++  c ++  + + l+ ly++fk+rg+ vig  +++          ++ +f++k+  ++fp+ls
  EPX73494.1  6 YDFAPLDRTGKPFPFSELKGKVVLVVNTAS-KCGFT-PQFQGLESLYQKFKDRGLMVIGFPCNQFGgqepgnneEVGEFCQKNYgVTFPVLS 95
                5777788999**********6666666666.88876.79********************999876666677777777777765458888887 PP

>> Redoxin  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   7.5e-08   0.00045      15      92 ..      12      96 ..       4     159 .] 0.73

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 7.5e-08
                TTCEEEEEHHHHTTSEEEEEEESTTT-HHHHHTHHHHHTHHHHHHCSTTTEEEE........EESSSHHHHHHHHH.TT-TSEEEE- CS
     Redoxin 15 atdgnsvslsefkgkkvvvnfvpgafcPtCsaehpyleklaellkekgvdvvav........vadndafvkefwgk.eglkfpvlsD 92
                +  g+++  se+kgk+v+v+  ++  c+  +++   le l++++k++g  v++            n++ v ef+ k +g++fpvls 
  EPX73494.1 12 DRTGKPFPFSELKGKVVLVVNTAS-KCGF-TPQFQGLESLYQKFKDRGLMVIGFpcnqfggqEPGNNEEVGEFCQKnYGVTFPVLSK 96
                5789999************99999.9998.89999*******************999998888888888********9*****9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       485  (0.0270511); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.38s 00:00:00.97 Elapsed: 00:00:00.58
# Mc/sec: 829.05
//
Query:       EPX73495.1  [L=829]
Description: AP-1 adaptor complex gamma subunit Apl4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   2.5e-117  392.6   9.6   3.1e-117  392.3   9.6    1.1  1  Adaptin_N        Adaptin N terminal region
    1.3e-18   67.3   0.1    3.2e-18   66.1   0.1    1.7  1  Alpha_adaptinC2  Adaptin C-terminal domain
  ------ inclusion threshold ------
       0.35   11.3   1.2        6.1    7.4   0.0    3.6  4  HEAT             HEAT repeat


Domain annotation for each model (and alignments):
>> Adaptin_N  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  392.3   9.6  5.2e-121  3.1e-117       2     522 ..      21     577 ..      20     579 .. 0.92

  Alignments for each domain:
  == domain 1  score: 392.3 bits;  conditional E-value: 5.2e-121
                 HHHCCHHHHHHCCSSS...-SCHHHHHHHHHHHHHHHCT---GHHHHHHHCCCCSS-CHHHHHHHHHHHHHCTTSCCHHCCCCHHHHHHCCSSSHHHHH CS
   Adaptin_N   2 ekriqqelaeilnsnk...dddekkkeavkkliylialGedvsflffevvklvaskdfelKrlvYlylellaeesedlalLvtnslqkDlkdpnqlirg 97 
                 ++ i +e+a+i++  +    d + ++++v+kl++l++lGe+++f+++e++kl++s +f +Krl+Yl ++ll++e++++++L+tnslq+Dl++pn+++++
  EPX73495.1  21 NSAIRKESAQIRKNIRqgsADTRMRRRNVAKLLFLYLLGEPTHFGQIECLKLLSSPQFMDKRLGYLGAMLLLDENQEVLTLLTNSLQQDLQSPNKFVVS 119
                 677899999999999999999999*************************************************************************** PP

                 HHHHHHCCC--CCCHHHHHHHHHHHHT-SSHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHCTT-SSHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC CS
   Adaptin_N  98 lALrvLssirvpelaedlapaikkllkdrspyvrkkAalailklykkdpdllrkqlveeikellsdkdpgvvlaAvalleeikkndrlllkllpklvrr 196
                 lAL++ ++i +pela+dl + i kl ++++++v+kkA+l++l++++k+p+l  + ++   +ell++k++gv+ + ++    + +  +   +l+p ++++
  EPX73495.1 120 LALSAFGNIASPELARDLSNIISKLCSSSHNFVSKKALLCALRVVQKEPELADP-YLLSAEELLHSKSHGVLMSDISFVMGL-CRIHP--NLIPRFAEH 214
                 ***************************************************877.69***************9988777777.55566..677777777 PP

                 HHHHH..................HCS-HHHHHHHHHHHCC---SSHHHH..HHHHHHHCGGCG.......CSSCHHHHHHHHHCCHCCCCSTHHHCCHH CS
   Adaptin_N 197 Lcnll..................teldpwlqvkiiklltrlarqepeerskkellesllnllq.......ssnnaVlletvnlivelapknelivlavn 270
                  + l+                  +++dp+lq+ki+++l++ a+++ + +++   + ++l+++        +++na+l+ +v++i +++++++l+vl vn
  EPX73495.1 215 TDALIhrlrqlssntysselnigNVSDPFLQIKILQILSIFAQHDASINDR---ISDILAQVCsntdssrNAGNAILYQAVRTILDVDSDSSLRVLGVN 310
                 55555777777799999999999*********************9999976...6666666656666999***************************** PP

                 CHHHHHHSSCCTCHHHHHCHHHHHHHHXXTTTT.TTTCCCCSXXTTSXHHHHHHHHHHHCCCXXTTTHHHHHHHHHHHTTSSXXHHHHHHHHHHHHHHH CS
   Adaptin_N 271 aLvrllsskdenlryvaLrtllkivkkepkavq.hldlkifllktdddvsirlkaldlllklvdesNvkeivkeLkkyvkevadedfksklvkaIgrla 368
                 +L ++l ++d+n+ryvaL++l ++v +e++avq h+ +++ +l  d d+si+ +al+l++ lv+esNv+ +v+eL++y+  v+d  ++s++++ I +++
  EPX73495.1 311 ILAKFLGNRDNNTRYVALNMLKRVVNTEENAVQrHRSTILSCLY-DVDISIQARALELSTFLVNESNVRFMVRELLTYLDTVSDD-MRSRTAQYITEVT 407
                 *******************************************9.**********************************777666.************* PP

                 HHSCCHHHHHHHHHHHHHTTXXHHHHHHHHHHHHHHHHHSTTTSTTCHHHHCCTCCG.XXSHHHHHHHHHHHHHTTTTXTT.................. CS
   Adaptin_N 369 ekfatdaewvldvllellslsgesvkdeivevirdliqkvpelheeiiekLaellek.ieseearaaaiWllGeygelvsn..............te.s 451
                  +fa++++w+ d+ll++ +++g+++++++++ +++li   p+lhe++  kL+++l++ i++e+++ a +W+lGeyg+ +                +e +
  EPX73495.1 408 NAFAPNKRWHFDTLLRVFKSAGNFLSESALSTFLRLIASAPDLHEYATLKLYAALKDdISQEALILASLWVLGEYGQYLLSpsmnfdddtlptniSEdD 506
                 *******************************************************999**********************99**********8885556 PP

                 HHHHHHCTTTTTTTSXHHHHHHHHHHHHHHHHCXGCC.THXHHHHHHHHHHHXXSHHHHHHHHHHHHHHCC CS
   Adaptin_N 452 asdllrslaekfvlesekvklqiltalvKlyltspdketqekliqlvlslatssdlevrdRaveylqllss 522
                 + dl++ ++      + ++  + l++l+Kl++++++ ++ +k++ l++ + +  + ev++R++ey  ++++
  EPX73495.1 507 ILDLVEEVLIGTNFLQPTIIQYGLNTLIKLSTRFQSSSSLSKIQRLIEFYGKHRNTEVQQRSIEYQHVIQD 577
                 66666655544444445588899*****************************99************99987 PP

>> Alpha_adaptinC2  Adaptin C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.1   0.1   5.3e-22   3.2e-18       3     111 .]     715     824 ..     713     824 .. 0.93

  Alignments for each domain:
  == domain 1  score: 66.1 bits;  conditional E-value: 5.3e-22
                      EEEEEETTEEEEEEEEETTSTTEEEEEEEEEE-S.SS-EEEEEEEEEEBTTCEEEEEEES-S-B-TTCEEEEEEEEEEESCTTS-EEEEEEEEE CS
  Alpha_adaptinC2   3 vvlyekddlqIgfkfekperpgqiritlsftNks.sqpisnfsfqaavpkslklqlqppsstvlppnpggqitqvllienpskkplrmrlrisy 95 
                        +y+k+d+ +++  +k e +++++i+++f+Nks  ++++++++++avpks+kl+lqp  st++ p  g +++q+++i++p++ ++++rlris 
       EPX73495.1 715 LLVYDKHDVILSLYPSKDEASKTAVIEARFKNKSvVSKVEKVHLEVAVPKSQKLRLQPLRSTSMDP--GMETSQTMRIQGPKNTQVKLRLRISI 806
                      679**************999999******************************************9..************************** PP

                      E.CTC.EEEEEEEEEEE- CS
  Alpha_adaptinC2  96 k.vgq.aikeqidvlkfp 111
                      +  ++  i +q+d +k+p
       EPX73495.1 807 TrEDKvGILDQVDYSKLP 824
                      *76667788888877776 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.0     0.001       6.1       4      29 ..     105     130 ..     101     130 .. 0.89
   2 ?   -0.5   0.1      0.35   2.1e+03       4      23 ..     140     159 ..     137     164 .. 0.86
   3 ?   -2.6   0.0       1.7     1e+04       3      25 ..     310     332 ..     309     335 .. 0.78
   4 ?   -3.2   0.0       2.6   1.5e+04       4      20 ..     348     364 ..     345     366 .. 0.65

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.001
                 HHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAakaLgalae 29 
                  l++ l++p+ +V + A+ a+g++a+
  EPX73495.1 105 SLQQDLQSPNKFVVSLALSAFGNIAS 130
                 578889******************96 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.35
                 HHHHHHT-SSHHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAaka 23 
                 ++ kl+s+++ +V + A+++
  EPX73495.1 140 IISKLCSSSHNFVSKKALLC 159
                 678999*******9999887 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 1.7
                 HHHHHHHT-SSHHHHHHHHHHHH CS
        HEAT   3 PlllkllsDpspeVReaAakaLg 25 
                 ++l k l   + + R+ A++ L 
  EPX73495.1 310 NILAKFLGNRDNNTRYVALNMLK 332
                 57888888999999999997665 PP

  == domain 4  score: -3.2 bits;  conditional E-value: 2.6
                 HHHHHHT-SSHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaA 20 
                 ++l++l D + ++ + A
  EPX73495.1 348 TILSCLYDVDISIQARA 364
                 56777777777766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (829 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       807  (0.0450109); expected 358.6 (0.02)
Passed bias filter:                      570  (0.0317921); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.85u 0.39s 00:00:01.24 Elapsed: 00:00:00.56
# Mc/sec: 4422.91
//
Query:       EPX73496.1  [L=148]
Description: complexed with Cdc5 protein Cwf18 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-29  103.9   8.7      1e-29  103.9   8.7    1.3  2  cwf18     cwf18 pre-mRNA splicing factor


Domain annotation for each model (and alignments):
>> cwf18  cwf18 pre-mRNA splicing factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.9   8.7   5.7e-34     1e-29       1     133 [.       3     131 ..       3     133 .. 0.89
   2 ?   -3.9   0.4         1   1.8e+04      20      22 ..     139     141 ..     134     146 .. 0.34

  Alignments for each domain:
  == domain 1  score: 103.9 bits;  conditional E-value: 5.7e-34
       cwf18   1 sLeeaaeeRKeRLaalrskkrkqeekekeeeeeeeeeeekkelpklsfRnYdpeteglklgfeappklaketveeqaaeleeeakeeaee.....skei 94 
                 sL+e ae RK+RL++lr+ +++q       ++e+ + ee++e   +++RnYdpe +++++gf +ppk  + tve+  +++e+e+k++ +e     ++e+
  EPX73496.1   3 SLDESAELRKQRLRELRKIRESQT------TQEAPDPEEQGE--LIKHRNYDPEAQAPRMGFIEPPKA-DVTVETISKDIENETKRKIQEqesipEEEL 92 
                 699*****************9993......334444444444..69*********************9.899999999999999998777788999*** PP

       cwf18  95 dlfnlapkkpnwDLKRdlakklekLerrTqkAiaeLire 133
                 dl++l pkkp wDL Rdl++++ +Le + q+A a  ir+
  EPX73496.1  93 DLTTLRPKKPTWDLDRDLKERMAVLEPKNQNARAYYIRQ 131
                 *************************************98 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 1
       cwf18  20 krk 22 
                 k++
  EPX73496.1 139 KKQ 141
                 111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1139  (0.0635284); expected 358.6 (0.02)
Passed bias filter:                      315  (0.0175693); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.30s 00:00:00.90 Elapsed: 00:00:00.54
# Mc/sec: 818.31
//
Query:       EPX73497.1  [L=260]
Description: ribosome biogenesis protein N [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.7e-46  156.4   2.9    7.2e-46  155.8   2.9    1.2  1  Ribosomal_S8e  Ribosomal protein S8e


Domain annotation for each model (and alignments):
>> Ribosomal_S8e  Ribosomal protein S8e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  155.8   2.9     4e-50   7.2e-46       3     137 .]      32     259 ..      30     259 .. 0.97

  Alignments for each domain:
  == domain 1  score: 155.8 bits;  conditional E-value: 4e-50
                    XBXXCCCSEESSTEEXXXSSXXX..................................................CCSBXXXXXXXEE.......... CS
  Ribosomal_S8e   3 isrdskhkrkltGgkakllrkkr..................................................kielgrkekatkl.......... 38 
                    ++  s  ++k++G+kakl+++kr                                                  +++++rkeka+k+          
     EPX73497.1  32 AHDASLYSQKVRGLKAKLHQNKRrkekiqmkktmkeheernttqrgseapapgavptylldreqesqakmlssAVKQKRKEKAAKYsvplpqvrgv 127
                    67788899******************************************************************************9999999876 PP

                    .SSHEEEEEEETTCEEEE..............................EEESESEEEEEETTTTEEEEEEEEEEECSSSTCHHHHTTC--TTEEEE CS
  Ribosomal_S8e  39 .gaervkvvrvrgGkrkk..............................ralrlkkanvthpeekvtkklkIlgVkknpsnneyvrlgvltKgaiie 103
                     ++e++kv+  ++Gk+k                               +alr kkanvth+e++vt++l+I+gVkknp+n+ y++lgvltKg+iie
     EPX73497.1 128 pEDEMFKVI--KTGKSKDkswkrmitkatfvgdgftrrpvkyerfirpMALRQKKANVTHKELGVTMQLPIIGVKKNPQNPTYTQLGVLTKGTIIE 221
                    55*******..999988889**************************************************************************** PP

                    EESHHHHHHHHTTEEE....EEEESEHHHHSSEEEEEE CS
  Ribosomal_S8e 104 vdvseLgevtqsgkvv....AqvtsrPgqdGcvnavlL 137
                    v+vseLg+vt++gkvv    Aq+t++P+ dGcvna lL
     EPX73497.1 222 VNVSELGLVTSGGKVVwgkyAQITNNPEMDGCVNALLL 259
                    ************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1904  (0.106197); expected 358.6 (0.02)
Passed bias filter:                      688  (0.0383736); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.31s 00:00:00.88 Elapsed: 00:00:00.47
# Mc/sec: 1656.13
//
Query:       EPX73498.1  [L=106]
Description: 60S acidic ribosomal protein Rpp1-3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.5e-26   90.7  10.0    8.1e-26   90.4  10.0    1.1  1  Ribosomal_60s  60s Acidic ribosomal protein


Domain annotation for each model (and alignments):
>> Ribosomal_60s  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.4  10.0   4.5e-30   8.1e-26       1      88 []      21     105 ..      21     105 .. 0.96

  Alignments for each domain:
  == domain 1  score: 90.4 bits;  conditional E-value: 4.5e-30
                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XX--SS--STTT CS
  Ribosomal_60s   1 eptaenikkvlkaagveveaarvkllvkalegkdieellangaaklaaaaaaaaaaaaaaaaaaaaeekkkeeeeeEeedddmGfgLF 88 
                    e+t++++ +++ka +veve++++++++kalegkd++ell n++++   aaaa+ a+a+aaaa+a+aeekk+e+++eEe+d+dmGfgLF
     EPX73498.1  21 EITSDKLLSLTKAGNVEVEPIWASIFAKALEGKDLKELLLNIGSG---AAAAPVAGAPAAAAEAPAEEKKEEAKAEEESDEDMGFGLF 105
                    69****************************************988...779999999999999999**99999999************ PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       577  (0.0321825); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.27s 00:00:00.66 Elapsed: 00:00:00.43
# Mc/sec: 739.48
//
Query:       EPX73499.1  [L=206]
Description: hypothetical protein SOCG_02722 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-15   57.0   0.2    9.6e-12   44.9   0.0    3.0  3  Ank_5     Ankyrin repeats (many copies)
    7.9e-13   48.8   0.2    2.2e-12   47.4   0.2    1.8  2  Ank_2     Ankyrin repeats (3 copies)
    6.6e-10   39.3   0.1    1.8e-06   28.4   0.1    3.9  4  Ank_4     Ankyrin repeats (many copies)
    1.7e-08   34.0   0.2    8.4e-05   22.7   0.1    4.0  4  Ank_3     Ankyrin repeat
    2.6e-07   30.8   0.1    0.00078   19.8   0.1    3.2  3  Ank       Ankyrin repeat


Domain annotation for each model (and alignments):
>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   1.4e-06     0.005      22      53 ..      10      41 ..       8      41 .. 0.96
   2 !   44.9   0.0   2.7e-15   9.6e-12       2      53 ..      24      74 ..      24      76 .. 0.97
   3 ?    1.6   0.0      0.11   3.8e+02      29      55 ..      80     107 ..      77     108 .. 0.88

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 1.4e-06
       Ank_5 22 vAakygaadvvrlLlargadlnltdsrGltal 53
                +Aa+ g+ ++v++ l +g+++n+ d++G+ta+
  EPX73499.1 10 IAASDGNVEIVLKHLQNGVSPNQADDNGYTAM 41
                79****************************96 PP

  == domain 2  score: 44.9 bits;  conditional E-value: 2.7e-15
       Ank_5  2 lehgpadvnrldgggntpLhvAakygaadvvrlLlargadlnltdsrGltal 53
                l++g +++n  d +g+t++h Aa+yg+ d++++L+++g d+n++d +G+t+l
  EPX73499.1 24 LQNG-VSPNQADDNGYTAMHAAASYGHRDLLEILVKHGGDANVKDQDGETPL 74
                6889.**********************************************8 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.11
       Ank_5  29 advvrlLl.argadlnltdsrGltaldl 55 
                  +v++ L+ ++ ad+ ++ ++Gl a ++
  EPX73499.1  80 IEVAQDLIeKYKADACAKSNDGLIAAQV 107
                 589999****************988765 PP

>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.4   0.2   6.2e-16   2.2e-12       2      81 ..       9      96 ..       8     100 .. 0.82
   2 ?    1.2   0.0      0.16   5.6e+02      11      54 ..      81     133 ..      76     144 .. 0.63

  Alignments for each domain:
  == domain 1  score: 47.4 bits;  conditional E-value: 6.2e-16
       Ank_2  2 hlAakngnlelv.klLlegadpn..k.ngktaLhyAakngnleivklLleh......adndgrtpLhyAarsghleivklLlek.gadinl 81
                 +Aa++gn e+v k+L +g+ pn  + ng ta+h+Aa++g+++++++L++h       d+dg+tpL+++   + +e+++ L+ek +ad  +
  EPX73499.1  9 WIAASDGNVEIVlKHLQNGVSPNqaDdNGYTAMHAAASYGHRDLLEILVKHggdanvKDQDGETPLFVCE--K-IEVAQDLIEKyKADACA 96
                58999999996526666****997637***********************99895544499********5..4.59999999775777665 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.16
       Ank_2  11 elvklLlegadpn...k..ngktaLhyAakngnl.eivklLleh..ad.ndgr 54 
                 e+ + L+e+++++   k  +g+ a ++  +ng   e++++L  +  ++ n+g+
  EPX73499.1  81 EVAQDLIEKYKADacaKsnDGLIAAQVVEENGEFpELASYLYTFsdLEpNNGN 133
                 46777775544444352458888888888888555778888876453354444 PP

>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.4   0.1   5.1e-10   1.8e-06       5      54 ..       8      56 ..       5      57 .. 0.93
   2 !   15.2   0.0   6.9e-06     0.025       5      40 ..      41      75 ..      41      77 .. 0.93
   3 ?    2.5   0.0     0.066   2.4e+02      13      40 ..      79     106 ..      78     121 .. 0.76
   4 ?    1.3   0.0      0.15   5.5e+02      11      30 ..     165     184 ..     155     191 .. 0.71

  Alignments for each domain:
  == domain 1  score: 28.4 bits;  conditional E-value: 5.1e-10
       Ank_4  5 LhyaaisgrlelvrlLlekgadinaqdnrsGetalhiAakrgnveilklL 54
                +  aa++g++e+v   l++g+++n   +++G ta+h Aa+ g+ + l+ L
  EPX73499.1  8 IWIAASDGNVEIVLKHLQNGVSPNQA-DDNGYTAMHAAASYGHRDLLEIL 56
                668999*******************8.******************99988 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 6.9e-06
       Ank_4  5 LhyaaisgrlelvrlLlekgadinaqdnrsGetalh 40
                +h+aa++g+ +l+++L+ +g d n   + +Get+l 
  EPX73499.1 41 MHAAASYGHRDLLEILVKHGGDANVK-DQDGETPLF 75
                69***********************8.999****96 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.066
       Ank_4  13 rlelvrlLlek.gadinaqdnrsGetalh 40 
                 ++e+++ L+ek +ad +a  +++G+ a +
  EPX73499.1  79 KIEVAQDLIEKyKADACAK-SNDGLIAAQ 106
                 5789999**988***9998.777887765 PP

  == domain 4  score: 1.3 bits;  conditional E-value: 0.15
       Ank_4  11 sgrlelvrlLlekgadinaq 30 
                 ++ ++ +  L e+g+di+ q
  EPX73499.1 165 KEEIDRILALKESGVDIDDQ 184
                 455555556669*****998 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.031   1.1e+02       8      30 ..      10      31 ..       5      32 .. 0.78
   2 !   22.7   0.1   2.3e-08   8.4e-05       1      30 [.      36      64 ..      36      65 .. 0.95
   3 ?    2.4   0.0     0.095   3.4e+02       1      28 [.      69      93 ..      69      96 .. 0.68
   4 ?   -1.4   0.0       1.6   5.8e+03      16      30 ..     169     182 ..     163     183 .. 0.75

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.031
       Ank_3  8 lAarsgnleivkfLlenkgadvn 30
                +Aa+ gn+eiv   l+ +g+ +n
  EPX73499.1 10 IAASDGNVEIVLKHLQ-NGVSPN 31
                8********7666666.588877 PP

  == domain 2  score: 22.7 bits;  conditional E-value: 2.3e-08
       Ank_3  1 nGetpLhlAarsgnleivkfLlenkgadvn 30
                nG+t++h Aa++g+ ++++ L++ +g d n
  EPX73499.1 36 NGYTAMHAAASYGHRDLLEILVK-HGGDAN 64
                7**********************.8*9998 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.095
       Ank_3  1 nGetpLhlAarsgnleivkfLlenkgad 28
                +GetpL+ +  + ++e+++ L+e++ ad
  EPX73499.1 69 DGETPLF-V--CEKIEVAQDLIEKYKAD 93
                5888988.4..44444588888887777 PP

  == domain 4  score: -1.4 bits;  conditional E-value: 1.6
       Ank_3  16 eivkfLlenkgadvn 30 
                 +++ +L e  g+d++
  EPX73499.1 169 DRILALKE-SGVDID 182
                 56788888.899997 PP

>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.48   1.7e+03       9      31 ..      11      34 ..       9      35 .. 0.62
   2 !   19.8   0.1   2.2e-07   0.00078       1      27 [.      36      65 ..      36      68 .. 0.86
   3 !    6.8   0.0    0.0029        10       1      30 [.      69      97 ..      69      99 .. 0.76

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.48
                HHHHTTHHHH.HHHHTTTSTTCBT CS
         Ank  9 Aatngkkrii.klLLhGAnlnald 31
                Aa+ g+++i+ k L +G ++n+ d
  EPX73499.1 11 AASDGNVEIVlKHLQNGVSPNQAD 34
                565677666634544788898877 PP

  == domain 2  score: 19.8 bits;  conditional E-value: 2.2e-07
                TSBBHHHHHHHHTTHHHHHHHH.TT..TST CS
         Ank  1 dGnTPLHlAatngkkriiklLL.hG..Anl 27
                +G+T+ H Aa++g+ + ++ L+ hG  An+
  EPX73499.1 36 NGYTAMHAAASYGHRDLLEILVkHGgdANV 65
                8**********************9745554 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.0029
                TSBBHHHHHH.HHTTHHHHHHHH..TTTSTTCB CS
         Ank  1 dGnTPLHlAa.tngkkriiklLL..hGAnlnal 30
                dG TPL + +  +    ++++L+  + A+  a+
  EPX73499.1 69 DGETPLFV-CeKIE---VAQDLIekYKADACAK 97
                8*******.84665...******7335887666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (206 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       521  (0.0290591); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.45u 0.28s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 1432.83
//
Query:       EPX73500.1  [L=643]
Description: puf family RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.8e-40  136.5   9.5    3.3e-38  131.3   0.0    5.0  6  CPL             CPL (NUC119) domain
    3.2e-05   23.4   0.3         27    4.7   0.0    5.5  5  PUF             Pumilio-family RNA binding repeat
     0.0049   16.9  33.0      0.013   15.5  33.0    1.6  1  Merozoite_SPAM  Merozoite surface protein (SPAM)
  ------ inclusion threshold ------
      0.011   15.3   0.2       0.42   10.1   0.1    2.8  2  Leu_Phe_trans   Leucyl/phenylalanyl-tRNA protein transferase
      0.044   12.3  12.5      0.082   11.4  12.5    1.3  1  RRN3            RNA polymerase I specific transcription initi
        1.3    7.1  32.2        1.1    7.4  27.8    2.1  2  Nop14           Nop14-like family
        2.5    6.3  20.6        4.4    5.5  20.6    1.3  1  CDC45           CDC45-like protein


Domain annotation for each model (and alignments):
>> CPL  CPL (NUC119) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   1.5       5.5   1.4e+04      39      51 ..     105     117 ..      90     134 .. 0.51
   2 !    5.3   0.0    0.0089        23      55     100 ..     155     197 ..     147     213 .. 0.83
   3 ?    0.2   0.0      0.33   8.5e+02      63     116 ..     235     288 ..     224     338 .. 0.59
   4 ?    0.9   0.0      0.21   5.3e+02      57     102 ..     342     388 ..     336     404 .. 0.74
   5 !  131.3   0.0   1.3e-41   3.3e-38       2     143 .]     432     567 ..     431     567 .. 0.98
   6 ?   -1.9   0.0       1.5   3.9e+03      77      99 ..     599     622 ..     578     638 .. 0.54

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 5.5
         CPL  39 tSKKdaevRrkEL 51 
                 +S Kda+  +k L
  EPX73500.1 105 KSSKDAHANQKKL 117
                 3334444444444 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.0089
         CPL  55 ispallsaiaknaeellsdnlgsqfvaevLlsaegdkqeaieaiak 100
                 +  +l ++i++n+++++ +  +s +++ ++++ +++++e i   a+
  EPX73500.1 155 LVSELFDMIKSNVKQIVFKHDMSRVIQTCVKYGSKQQRETI---AS 197
                 5678999**************************99888665...44 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.33
         CPL  63 iaknaeellsdnlgsqfvaevLlsaegdkq.eaieaiaklakgdlvaee.kdeelh 116
                 +  ++++l++++ ++ +v ++ +  ++  q +a+  i+++   +++  +  ++++h
  EPX73500.1 235 LYGHVTKLIRHREAAYVVEDIFREYTNLHQqNAL--ICEFYGPEFQVFKeRTQDMH 288
                 5556667777777777777777665554332333..44444333333222333333 PP

  == domain 4  score: 0.9 bits;  conditional E-value: 0.21
         CPL  57 pallsaiaknaeellsdnlgsqfvaevLlsaegdkqeai.eaiakla 102
                   ll++ ++++ e+++++ gsq+ +++   a+ ++++a+ +a+  ++
  EPX73500.1 342 KDLLQSTKEQIYEFVHTRDGSQVAMKLFAIANAKDRKAMlKALRPYF 388
                 67899999999999999999999999998887766655414444444 PP

  == domain 5  score: 131.3 bits;  conditional E-value: 1.3e-41
         CPL   2 dkygRrvllYllsg.rdgryfspeviklLkegdelakktSKKdaevRrkELleaispallsaiaknaeellsdnlgsqfvaevLlsaegdkqeaieaia 99 
                 +k++RrvllY+l+g  d ryfs+e+  +L++   l+++tSKKd+ vRr+EL +ai p+ll++i+++a ell+++l+sq+v + Ll+  gdk+ a++a++
  EPX73500.1 432 HKFARRVLLYVLVGwEDARYFSKENRTMLASLSPLKATTSKKDPLVRRNELKAAIGPMLLNVISNAAGELLAESLSSQVVVDTLLTVPGDKTAAVNAVL 530
                 79**********9989*********************************************************************************** PP

         CPL 100 klakgdlvaeekdeelhliekpfgsrlLKaLiqgdeekwenkek 143
                 ++++g+      +++ hli++ ++sr+LK+L+q++  +w+ +ek
  EPX73500.1 531 RAFEGN-----PADDTHLIHQIHCSRALKTLVQNG--HWNGAEK 567
                 ******.....9***********************..**98875 PP

  == domain 6  score: -1.9 bits;  conditional E-value: 1.5
         CPL  77 sqfvaevLlsaegdkq.eaieaia 99 
                 + +v++vL++ +++++ + ++++ 
  EPX73500.1 599 AFVVLAVLETLDEKERkKFLDQLK 622
                 445666666655544423333333 PP

>> PUF  Pumilio-family RNA binding repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.011        27      16      34 ..     177     195 ..     177     196 .. 0.87
   2 ?    3.9   0.0      0.02        50       1      15 [.     198     212 ..     198     215 .. 0.93
   3 ?    4.4   0.0     0.013        34       2      25 ..     235     258 ..     234     268 .. 0.86
   4 ?    3.1   0.0     0.034        86       2      15 ..     422     435 ..     421     439 .. 0.86
   5 ?   -1.7   0.0       1.1   2.9e+03      15      34 ..     598     617 ..     598     618 .. 0.75

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.011
                 HHHHHHHHHHSCHHHHHHH CS
         PUF  16 nyvvQkllehateeqkkli 34 
                 ++v+Q++ ++ ++ q++ i
  EPX73500.1 177 SRVIQTCVKYGSKQQRETI 195
                 89*******9999998766 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.02
                 HHGGGHHHHHTSTTH CS
         PUF   1 sikgnlvqLstdqyG 15 
                 +++g++v+L++ +yG
  EPX73500.1 198 ELSGSFVELCKSPYG 212
                 5899**********9 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.013
                 HGGGHHHHHTSTTHHHHHHHHHHH CS
         PUF   2 ikgnlvqLstdqyGnyvvQklleh 25 
                 + g++++L+ ++ ++yvv+ ++  
  EPX73500.1 235 LYGHVTKLIRHREAAYVVEDIFRE 258
                 679***************988875 PP

  == domain 4  score: 3.1 bits;  conditional E-value: 0.034
                 HGGGHHHHHTSTTH CS
         PUF   2 ikgnlvqLstdqyG 15 
                 ++++l++Ls+++++
  EPX73500.1 422 FENELIKLSVHKFA 435
                 7899*********7 PP

  == domain 5  score: -1.7 bits;  conditional E-value: 1.1
                 HHHHHHHHHHHSCHHHHHHH CS
         PUF  15 GnyvvQkllehateeqkkli 34 
                 G++vv  +le+++e+++k+ 
  EPX73500.1 598 GAFVVLAVLETLDEKERKKF 617
                 566777899**888888765 PP

>> Merozoite_SPAM  Merozoite surface protein (SPAM)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5  33.0     5e-06     0.013       9     162 ..      12     166 ..       7     170 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 5e-06
  Merozoite_SPAM   9 pekkseenkkkenlLeevkitsedkediakEnedvveeeeeedleekedeeeEteeeeteekneeeie.eetedeedEeeveEeeekeeeedkkk 102
                     +++ ++ n+k+    ++v++  + k + +   e+ + e +       e ee E+ +e  e+++e+e    e ede+d ee+eEe e + ee kk 
      EPX73500.1  12 LKNGNKTNNKRSKPADSVELKVQSKKQAVTSPEESLSESDSHVSSDSESEEAEDADEKHEQEEEDEFAgFEDEDEIDNEEEEEEGEEKSEESKKS 106
                     4455666668888889*********9999999999999999988888888888887777777777765246666666666666555556666888 PP

  Merozoite_SPAM 103 ekeeeqsnentdtsekkqkldsekDekaqnLIskeykdnekskkaaetlvntlisLleek 162
                     +k+ +  ++  ++++k  k+  +  +ka+ L  k  ++   +    +tlv  l+++++ +
      EPX73500.1 107 SKDAHANQKKLQKDRKASKPFADVSMKAKTLWDKLRQKGSLKADERKTLVSELFDMIKSN 166
                     88888888888888899999999999*******98888888888899********99876 PP

>> Leu_Phe_trans  Leucyl/phenylalanyl-tRNA protein transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.1   0.00016      0.42      17      95 ..     131     211 ..     120     237 .. 0.85
   2 ?    2.1   0.0     0.049   1.3e+02      73      94 ..     245     266 ..     224     276 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00016
  Leu_Phe_trans  17 eeeepilwwspdpRavlelde.lhisrslrktlrkkefevtidkaFeeVieacaekk.rregtWiteeiieaYteLheagl 95 
                    + + ++lw + ++++ l+ de   +  +l  +++++  ++ + ++ ++Vi++c +   ++++  i +e+   ++eL +  +
     EPX73500.1 131 SMKAKTLWDKLRQKGSLKADErKTLVSELFDMIKSNVKQIVFKHDMSRVIQTCVKYGsKQQRETIASELSGSFVELCKSPY 211
                    46778999999*******9994556788999***********************9885555888*******9999988755 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.049
  Leu_Phe_trans  73 rregtWiteeiieaYteLheag 94 
                    +re + + e+i + Yt+Lh++ 
     EPX73500.1 245 HREAAYVVEDIFREYTNLHQQN 266
                    4558999************986 PP

>> RRN3  RNA polymerase I specific transcription initiation factor RRN3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4  12.5   3.2e-05     0.082     215     359 ..      61     205 ..      44     216 .. 0.58

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 3.2e-05
        RRN3 215 veledlddeedeeleeelee....deddedddeddeesdlddlssdeeaeedeekdeeeeslkkikelvekLDail...tllfehlekkfssestkeee 306
                  e ed d++ ++e+e+   e    + d+++ d+++ee++ ++ s++++++++ +++ ++++l+k ++ ++    +    ++l ++l++   + s k++e
  EPX73500.1  61 EEAEDADEKHEQEEED---EfagfE-DEDEIDNEEEEEEGEEKSEESKKSSK-DAHANQKKLQKDRKASKPFADVSmkaKTLWDKLRQ---KGSLKADE 151
                 2445555554444444...244453.33333333332333333333222222.22222234555555555444444011555566655...66667788 PP

        RRN3 307 eeeeglelfntLlslFkstiLptyksrhvqFllFhfssld.peladkflglLid 359
                  ++  +elf+++ s  k+++ +   sr +q  + + s+++ + +a ++ g+ ++
  EPX73500.1 152 RKTLVSELFDMIKSNVKQIVFKHDMSRVIQTCVKYGSKQQrETIASELSGSFVE 205
                 888889************************999888888745566666666665 PP

>> Nop14  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4  27.8   0.00041       1.1     342     443 ..      21     125 ..       3     176 .. 0.39
   2 ?    1.6   0.1     0.023        60     689     804 ..     287     393 ..     259     398 .. 0.73

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.00041
       Nop14 342 a............taeee.eeededdfeedddlveseseeeeeeeeedeeeeedeeeeeeeeede.ddlsdleseeeeeedeleeelleeekkaaeekk 426
                 +            +++++     e++ +e+d++v+s+se+ee         e+ +e+ e+eeede +  +d+++ ++eee+e  ee+ ee+kk+++++ 
  EPX73500.1  21 KrskpadsvelkvQSKKQaVTSPEESLSESDSHVSSDSESEE--------AEDADEKHEQEEEDEfAGFEDEDEIDNEEEEEEGEEKSEESKKSSKDA- 110
                 022222111111111111122222223333333333333333........222222221111111011111111111111111111111222211111. PP

       Nop14 427 ekkkkkkkseekakeel 443
                   ++++kk ++++k++ 
  EPX73500.1 111 --HANQKKLQKDRKASK 125
                 ..122233333333333 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.023
       Nop14 689 lslsdllkeesskeeseqlklsllstalsllekfaelyseksafveifepilkllkklklkkkklpeelqekleellaklerllkkalesRr.pLelqk 786
                 +++ ++l+      e  + ++s+++ + +++e    + +++ +f+ + + +l+ +++ +  +++ ++ lq++ e++ + ++++  ++  ++   ++  k
  EPX73500.1 287 MHIDKILQ------EHPEKRASVMNNLWKTIEG--SIAKGSIGFTMVHRAMLEFIQHAS--TNEAKDLLQSTKEQIYEFVHTRDGSQVAMKLfAIANAK 375
                 44445544......5567788888888888887..5789999***************55..55555555555555555555555554444444999999 PP

       Nop14 787 hkplaiktlePkFeeeyd 804
                  ++ ++k l P F e+ +
  EPX73500.1 376 DRKAMLKALRPYFAETAK 393
                 9************99865 PP

>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5  20.6    0.0017       4.4     116     196 ..      47     129 ..      25     172 .. 0.34

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0017
       CDC45 116 leeereayealeeeeesdeedeeeeeeddddeeeeeeeeedeedeeedeeeskkkrksksdeeee......sddddersrkrrrse...p 196
                 l+e+ + + + +e ee++       + d+++e+eee+e    ede+e ++e+++++ ++++ee++      ++++++ ++ r+ s+   +
  EPX73500.1  47 LSESDSHVSSDSESEEAE-------DADEKHEQEEEDEFAGFEDEDEIDNEEEEEEGEEKSEESKksskdaHANQKKLQKDRKASKpfaD 129
                 222222222222222222.......11111111111111111111111111111111111111111001012222222222222223330 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (643 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2529  (0.141056); expected 358.6 (0.02)
Passed bias filter:                      775  (0.0432261); expected 358.6 (0.02)
Passed Vit filter:                       139  (0.0077528); expected 17.9 (0.001)
Passed Fwd filter:                        27  (0.00150594); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.93u 0.28s 00:00:01.21 Elapsed: 00:00:00.48
# Mc/sec: 4041.95
//
Query:       EPX73501.1  [L=209]
Description: phosphoribosylglycinamide formyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-44  152.2   0.1    1.4e-44  152.0   0.1    1.0  1  Formyl_trans_N  Formyl transferase


Domain annotation for each model (and alignments):
>> Formyl_trans_N  Formyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.0   0.1   7.9e-49   1.4e-44       3     181 .]       5     199 ..       3     199 .. 0.92

  Alignments for each domain:
  == domain 1  score: 152.0 bits;  conditional E-value: 7.9e-49
                     EEEEESESSHHHHHHHHHHHHTTSE..CEEEEEEESCTTEHCHHHHHHCCHCCCECHHCC.......SCCCCCCCHHHHHHHHCTT-SEEEEES- CS
  Formyl_trans_N   3 ivvlisgtgsnlqalldalkkgsle..advvlvvsnkdkaaglekaeaasiptkvfeekk.......leprsqfeeelaeelkelkadlivlagy 88 
                     +vvlisg+gsnlq ++da+++g l+  a v  v+sn+++a+gle+a +a+ipt v    +          r++++ +lae + +lk+ l+v+ag+
      EPX73501.1   5 LVVLISGSGSNLQSIIDATQNGILKgkAVVSHVLSNRKNAYGLERASKAGIPTSVHPLLPykkeygnEIGRNKYDTDLAERIIALKPSLVVCAGW 99 
                     79********************9997788889**********************9987775567655333579********************** PP

                     -S---HHHH...HSSTTSEEEEESSSTTTTBSS-HHHHHHHTTSSE....EEEEEEE--SSSSTS-EEEEEEEE--TT--HHHHHHHHHHHHHHH CS
  Formyl_trans_N  89 mkllpkelv...qavrlkilniHpSLLPrfkGaaaiqraleaGdke....tGvtihfvdeelDtGailaqkkveiiaedtkeeleqrvadaehka 176
                     m +l++e++   ++++ +i+n+Hp+L+++f+G++ai+ra+ea  +     tG+++h+v  e+D G++++ ++v+i   dt+e+le++++ +ehk+
      EPX73501.1 100 MHILSPEVLgplEKQKIGIINLHPALPGAFNGIHAIERAFEAAREGkitkTGAMVHWVITEVDGGKPILIQEVPIESSDTVETLEDKIHGVEHKI 194
                     ********877799999***********************9988656667********************************************* PP

                     HHHHH CS
  Formyl_trans_N 177 lveal 181
                     lvea+
      EPX73501.1 195 LVEAI 199
                     **996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       433  (0.0241508); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 1503.00
//
Query:       EPX73502.1  [L=181]
Description: hypothetical protein SOCG_06156 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.012   15.2   0.3      0.015   14.9   0.3    1.3  1  Mtp       Golgi 4-transmembrane spanning transporter


Domain annotation for each model (and alignments):
>> Mtp  Golgi 4-transmembrane spanning transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.3   8.2e-07     0.015      43      90 ..      89     136 ..      54     172 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 8.2e-07
         Mtp  43 iillfivsvslllgvvknrerlllPflslqildfllslltllgsyiel 90 
                 i  l+ivs++ ++ + + +erl+l +++  +l+f  + ++llg y+ +
  EPX73502.1  89 IFTLMIVSFADIYHMFRFKERLFLGYMTSGLLEFFSCSIALLGLYLAI 136
                 66899****************************************874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       454  (0.0253221); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1355.13
//
Query:       EPX73503.1  [L=187]
Description: nucleoside triphosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-48  164.1   0.0    3.7e-48  163.9   0.0    1.0  1  Ham1p_like  Ham1 family


Domain annotation for each model (and alignments):
>> Ham1p_like  Ham1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.9   0.0   2.1e-52   3.7e-48       1     186 [.       7     181 ..       7     182 .. 0.90

  Alignments for each domain:
  == domain 1  score: 163.9 bits;  conditional E-value: 2.1e-52
                 EEEC-S-HHHHHHHHHHTTTECCCE.EECCCCEE----BSSSHHHHHHHHHHHHHH.HTS-EEEEEEEEEEGGGTTTBGGGTTTTTH.TTCHHHHHHHH CS
  Ham1p_like   1 ivfaTgNkgKlrevkeilaeellevkslkelelpeveEtqgtfeenalkKaraaae.aglpvladDsgLevdaLnglPGvysarfag.egaedeenlak 97 
                 i+f+TgNk+Kl++v++il+ +++e+k+     + +++E+qg++++++++K++aaae  + pvl++D+ L  da+n+lPG+y+++f++  g +   +l +
  EPX73503.1   7 ILFVTGNKHKLADVTSILG-SEFEIKNH----SYDLPEIQGSLQDIVTEKCKAAAEiVKGPVLTEDTWLSYDAMNDLPGPYIKWFLNsIGCD---GLYH 97 
                 89****************6.45555532....34667******************955777************************7745555...9999 PP

                 HHHHCTHTTS--EEEEEEEEEEEETTTTEEEEEEEEEEEEE-SS.--SSSSTTGGGEEETT-SSBTTTS.CHHHHHHSHHHHHHHHHHH CS
  Ham1p_like  98 lleeleeeeedrsArfvcvlaladpeeeeellfeGeveGeiveeprgeggfGyDpiFvpeegektfaelskeeknaiShRgkAleklle 186
                 +l++++  +  + A++ c++++ ++ ++++++f G+++Ge+v  prg++gfG++ iF+p+++ekt+ae++++e+na+ShR+ A  kl++
  EPX73503.1  98 MLDGFS--T--KAAKAGCTFGYTEGPGKPIHMFDGILHGEVVA-PRGDKGFGWNAIFQPRGHEKTYAEMDDDERNACSHRFLAAMKLRD 181
                 ***994..4..79*****************************6.***************87677**********************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       278  (0.0155056); expected 358.6 (0.02)
Passed bias filter:                      269  (0.0150036); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1430.23
//
Query:       EPX73504.1  [L=140]
Description: RNase P and RNase MRP subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.1e-38  129.5   0.0      6e-38  129.2   0.0    1.1  1  RNase_P_Rpp14  Rpp14/Pop5 family
  ------ inclusion threshold ------
      0.069   12.3   0.0      0.074   12.2   0.0    1.1  1  Cnd3           Nuclear condensing complex subunits, C-term do


Domain annotation for each model (and alignments):
>> RNase_P_Rpp14  Rpp14/Pop5 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.2   0.0   6.7e-42     6e-38       1     103 []       7     120 ..       7     120 .. 0.95

  Alignments for each domain:
  == domain 1  score: 129.2 bits;  conditional E-value: 6.7e-42
                    EEEEEEEEESS.................-HHHHHHHHHHHHHHHHHHHHHHH--..EEEEEETTTTEEEEEEEGGGHHHHHHHHHT--EETTEEEE CS
  RNase_P_Rpp14   1 RYllveilypdeee...........elteksllkairesvqelfGdyglgklgsslsvkyfspatstaiiRcsresyrlvwaaLtlitkiegrpvv 85 
                    RYll+e+lyp+e++           ++t++ l k++r++++e+fGd+g+gk++sslsvkyfsp+tst+i+R+sr+++rl+waaL ++++++g+pvv
     EPX73504.1   7 RYLLFEVLYPQEKQfheyptvpsdgSITTSGLSKLLRNTIAENFGDVGIGKVASSLSVKYFSPSTSTGILRVSRQHFRLAWAALCFLRELNGKPVV 102
                    9**********744777888899878********************************************************************** PP

                    EEEEEEESSHHHHHHHTT CS
  RNase_P_Rpp14  86 frvvrvsGTikkaeeeai 103
                    +rvvrvsGTikkae +ai
     EPX73504.1 103 IRVVRVSGTIKKAELAAI 120
                    **************9886 PP

>> Cnd3  Nuclear condensing complex subunits, C-term domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   8.2e-06     0.074     137     193 ..      31      95 ..       9     115 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 8.2e-06
                 HHHHHHHHHHHHHHH--SHH......HHHHHHHHHHH-GGGTT-H..HHHHHHHHHHHHHHCC-H CS
        Cnd3 137 qaiaaeglcKLllagiltds......elLsrLvllyFnpeteenq..rLrQcLsvffpvYafssp 193
                  +i++ gl+KLl + i ++       ++ s+L ++yF+p+t+ +     rQ +   + +++f ++
  EPX73504.1  31 GSITTSGLSKLLRNTIAENFgdvgigKVASSLSVKYFSPSTSTGIlrVSRQHFRLAWAALCFLRE 95 
                 57999******9999985556678889*************9994443778888888888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       304  (0.0169558); expected 358.6 (0.02)
Passed bias filter:                      277  (0.0154498); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 1061.42
//
Query:       EPX73505.1  [L=182]
Description: ER membrane protein DP1/Yop1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.9e-26   89.8   9.4    1.5e-25   88.9   9.4    1.4  1  TB2_DP1_HVA22  TB2/DP1, HVA22 family


Domain annotation for each model (and alignments):
>> TB2_DP1_HVA22  TB2/DP1, HVA22 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.9   9.4   8.2e-30   1.5e-25       1      77 []      68     144 ..      68     144 .. 0.99

  Alignments for each domain:
  == domain 1  score: 88.9 bits;  conditional E-value: 8.2e-30
  TB2_DP1_HVA22   1 PayaslkaleskeksdetkwltYWvvfafltvvesladvllswiPfYylfKllfllwlvlpqtqgatyvYekflrpl 77 
                    Pa+ s++a+e+ +ksd+t+wltY+++ +fl+v+e++++++l++iPfY+l+K +fllwl+lp+++ga++vY+ ++rp+
     EPX73505.1  68 PAFFSIHAIETASKSDDTQWLTYYLITSFLNVIEYWSKLILYYIPFYWLIKAVFLLWLALPKFNGAAIVYNYVIRPY 144
                    9**************9***********************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       618  (0.0344693); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.44
# Mc/sec: 1250.08
//
Query:       EPX73506.1  [L=361]
Description: DNAJ domain-containing protein Psi1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-40  137.6   0.0    4.3e-40  137.2   0.0    1.1  1  DnaJ_C    DnaJ C terminal domain
      3e-24   84.9   2.1    4.6e-24   84.3   2.1    1.3  1  DnaJ      DnaJ domain


Domain annotation for each model (and alignments):
>> DnaJ_C  DnaJ C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.2   0.0   4.7e-44   4.3e-40       3     148 .]     191     347 ..     189     347 .. 0.94

  Alignments for each domain:
  == domain 1  score: 137.2 bits;  conditional E-value: 4.7e-44
                 EEEEE-HHHHHH-.EEE.EEEE.............TEEEEEE-TT--TT-EEEETT-SSSS...S---EEEEEEE---SS-EEETTEEEEEEEEEHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      DnaJ_C   3 veleisleelykGktkkikikrnvi......kkekktlevkipaGikdgqkirlegeGdeeg.gepGDlivtikvkphpvFkrkgndlyveveislaea 94 
                  +l+isle+ly+G+tkk+ki+r+        +k +++lev+i++G+k+g+k++++geGde++ g   D+ +++ +kphpvF+r+g+dl +++e++l+ea
  EPX73506.1 191 RPLNISLEDLYTGCTKKLKITRRILdasgssVKADRILEVNIKPGWKAGTKVKFAGEGDEKPdGSVQDIQFVLGEKPHPVFTRQGDDLRMSIELTLKEA 289
                 579*******************988****9877777***********************9999***********99*********************** PP

                 HHTEEEEEE-SS-EEEEEE.....--TT-EEEETT-S-EET...TEE--EEEEEEEE-- CS
                 xxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      DnaJ_C  95 llGgklevptldgkvklki.....tqpgevlrikgkGmpklkkpgkrGdlyvevkvefP 148
                 llG + ++ t+dgk   k+     tqpg+ ++ +g Gmp  k+p++rG++++e kv++P
  EPX73506.1 290 LLGFSKQITTIDGKRL-KVssslpTQPGYEIKYPGFGMPLPKTPSQRGNMIIECKVKVP 347
                 ********99977643.555677***********************************9 PP

>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.3   2.1   5.1e-28   4.6e-24       2      63 .]       7      65 ..       6      65 .. 0.98

  Alignments for each domain:
  == domain 1  score: 84.3 bits;  conditional E-value: 5.1e-28
                HHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHHHHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ  2 yYeiLgvskdasedeIkkaYrklalkyHPDknpkdpeaeekFkeineAyevLsdpekRkqYD 63
                +Y++L+vs+d +++++kkaYrklalkyHPDkn   p+ e++Fkei+ Aye+Lsdp++Rk+YD
  EPX73506.1  7 LYDVLKVSPDVNDSDLKKAYRKLALKYHPDKN---PNGEQQFKEISLAYEILSDPQRRKMYD 65
                8*******************************...99************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (361 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       307  (0.0171231); expected 358.6 (0.02)
Passed bias filter:                      260  (0.0145016); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.46
# Mc/sec: 2360.54
//
Query:       EPX73507.1  [L=174]
Description: calcineurin regulatory subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.3e-26   88.8   9.5    1.5e-07   30.5   0.3    4.2  4  EF-hand_1     EF hand
    3.3e-23   81.9   5.9      1e-14   54.7   1.5    2.6  2  EF-hand_7     EF-hand domain pair
    2.5e-21   73.7   5.9    3.8e-05   23.3   0.3    4.4  4  EF-hand_6     EF-hand domain
    6.7e-19   66.5  10.0    1.9e-05   23.9   0.2    4.3  4  EF-hand_5     EF hand
    2.5e-13   49.6  12.2    0.00028   20.6   0.5    4.3  4  EF-hand_8     EF-hand domain pair
    1.2e-07   32.0   0.4      0.021   15.1   0.2    2.4  2  SPARC_Ca_bdg  Secreted protein acidic and rich in cysteine Ca
      8e-05   22.5   6.4       0.36   10.8   0.4    3.9  4  EF-hand_4     Cytoskeletal-regulatory complex EF hand
  ------ inclusion threshold ------
      0.035   14.4   0.1        2.2    8.7   0.1    2.8  3  EF-hand_9     EF-hand domain


Domain annotation for each model (and alignments):
>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.0   3.9e-08   8.7e-05       2      25 ..      26      49 ..      25      51 .. 0.92
   2 !   15.1   0.2   5.5e-06     0.012       4      24 ..      60      80 ..      58      85 .. 0.89
   3 !   25.3   0.3     3e-09   6.6e-06       2      29 .]      95     122 ..      94     122 .. 0.93
   4 !   30.5   0.3   6.5e-11   1.5e-07       2      27 ..     136     161 ..     135     163 .. 0.92

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 3.9e-08
                HHHHHHHHTTTSSSEEEHHHHHHH CS
   EF-hand_1  2 lkeiFrefDkDgdGkIdfeEfkel 25
                +++ F+++D +++G Id++Ef+++
  EPX73507.1 26 IRKRFKKIDANHSGSIDRNEFLSI 49
                7899*****************875 PP

  == domain 2  score: 15.1 bits;  conditional E-value: 5.5e-06
                HHHHHHTTTSSSEEEHHHHHH CS
   EF-hand_1  4 eiFrefDkDgdGkIdfeEfke 24
                ++F+++D Dg G +df+Ef++
  EPX73507.1 60 RLFSVVDEDGGGDVDFQEFIN 80
                68*****************97 PP

  == domain 3  score: 25.3 bits;  conditional E-value: 3e-09
                 HHHHHHHHTTTSSSEEEHHHHHHHHHHH CS
   EF-hand_1   2 lkeiFrefDkDgdGkIdfeEfkellkkl 29 
                 l+ +F+++D D+dG+I+  E+  +lk++
  EPX73507.1  95 LRFAFKIYDIDRDGYISNGELFLVLKMM 122
                 899*******************999975 PP

  == domain 4  score: 30.5 bits;  conditional E-value: 6.5e-11
                 HHHHHHHHTTTSSSEEEHHHHHHHHH CS
   EF-hand_1   2 lkeiFrefDkDgdGkIdfeEfkellk 27 
                 +++ ++e+DkD dGkI+feEfk++++
  EPX73507.1 136 VDKTIMEVDKDCDGKISFEEFKQVVS 161
                 7999*******************986 PP

>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.8   0.1   5.4e-10   1.2e-06       3      68 ..      25      80 ..      23      83 .. 0.87
   2 !   54.7   1.5   4.5e-18     1e-14       1      70 [.      92     160 ..      92     161 .. 0.87

  Alignments for each domain:
  == domain 1  score: 28.8 bits;  conditional E-value: 5.4e-10
   EF-hand_7  3 klkeaFkelDtdgdgyldkeellrllrkifqgagegsklsdeelellfkefDtdkdGvisfdEFlk 68
                +++ +Fk++D +++g++d++e+l++          +++l +    +lf  +D d+ G ++f+EF +
  EPX73507.1 25 RIRKRFKKIDANHSGSIDRNEFLSIPS------IANNPLAS----RLFSVVDEDGGGDVDFQEFIN 80
                7999*****************994444......56667666....9******************85 PP

  == domain 2  score: 54.7 bits;  conditional E-value: 4.5e-18
   EF-hand_7   1 eeklkeaFkelDtdgdgyldkee.llrllrkifqgagegsklsdeelellfkef....DtdkdGvisfdEFlkly 70 
                 eekl+ aFk +D d+dgy++  e +l +l+        g++l++++l++++++     D+d+dG+isf+EF++ +
  EPX73507.1  92 EEKLRFAFKIYDIDRDGYISNGElFL-VLKM-----MVGNNLREDQLQQIVDKTimevDKDCDGKISFEEFKQVV 160
                 69*********************666.9998.....9*******99666666544555*************9976 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0   4.3e-08   9.7e-05       1      25 [.      25      49 ..      25      51 .. 0.92
   2 !   11.5   0.1   9.8e-05      0.22       4      27 ..      60      83 ..      58      87 .. 0.90
   3 !   23.3   0.3   1.7e-08   3.8e-05       1      28 [.      94     121 ..      94     138 .. 0.91
   4 !   17.1   0.1   1.7e-06    0.0037       9      27 ..     143     161 ..     137     168 .. 0.90

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 4.3e-08
   EF-hand_6  1 elreaFklfDkdgdGkidaeElrka 25
                ++r+ Fk++D +++G+id++E+ ++
  EPX73507.1 25 RIRKRFKKIDANHSGSIDRNEFLSI 49
                5899******************876 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 9.8e-05
   EF-hand_6  4 eaFklfDkdgdGkidaeElrkalr 27
                ++F   D dg G +d++E+++ l+
  EPX73507.1 60 RLFSVVDEDGGGDVDFQEFINSLS 83
                58*****************98776 PP

  == domain 3  score: 23.3 bits;  conditional E-value: 1.7e-08
   EF-hand_6   1 elreaFklfDkdgdGkidaeElrkalrk 28 
                 +lr aFk++D d+dG+i+  El  +l++
  EPX73507.1  94 KLRFAFKIYDIDRDGYISNGELFLVLKM 121
                 5899*********************996 PP

  == domain 4  score: 17.1 bits;  conditional E-value: 1.7e-06
   EF-hand_6   9 fDkdgdGkidaeElrkalr 27 
                  Dkd dGki++eE++++ +
  EPX73507.1 143 VDKDCDGKISFEEFKQVVS 161
                 6***************987 PP

>> EF-hand_5  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.1     1e-08   2.3e-05       1      22 [.      26      47 ..      26      49 .. 0.89
   2 !    9.2   0.3    0.0004      0.89       4      22 ..      61      79 ..      57      83 .. 0.88
   3 !   14.1   0.1   1.1e-05     0.024       4      21 ..      98     115 ..      95     122 .. 0.88
   4 !   23.9   0.2   8.6e-09   1.9e-05       2      25 .]     137     160 ..     135     160 .. 0.88

  Alignments for each domain:
  == domain 1  score: 23.7 bits;  conditional E-value: 1e-08
                HHHHHHHH-SS-SSCE-HHHHH CS
   EF-hand_5  1 lkdtFqaiDlNgDGkIskeELk 22
                +++ F++iD+N++G I++ E+ 
  EPX73507.1 26 IRKRFKKIDANHSGSIDRNEFL 47
                5677****************95 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.0004
                HHHHH-SS-SSCE-HHHHH CS
   EF-hand_5  4 tFqaiDlNgDGkIskeELk 22
                +F+ +D +g G ++++E+ 
  EPX73507.1 61 LFSVVDEDGGGDVDFQEFI 79
                7*****************6 PP

  == domain 3  score: 14.1 bits;  conditional E-value: 1.1e-05
                 HHHHH-SS-SSCE-HHHH CS
   EF-hand_5   4 tFqaiDlNgDGkIskeEL 21 
                 +F+  D ++DG+Is  EL
  EPX73507.1  98 AFKIYDIDRDGYISNGEL 115
                 49************9887 PP

  == domain 4  score: 23.9 bits;  conditional E-value: 8.6e-09
                 HHHHHHH-SS-SSCE-HHHHHHHH CS
   EF-hand_5   2 kdtFqaiDlNgDGkIskeELktlv 25 
                 ++t  ++D++ DGkIs+eE+k++v
  EPX73507.1 137 DKTIMEVDKDCDGKISFEEFKQVV 160
                 348999***************986 PP

>> EF-hand_8  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.0   6.9e-05      0.15      32      49 ..      30      47 ..       9      49 .. 0.90
   2 !   10.4   0.6    0.0002      0.45      31      51 ..      61      81 ..      58      84 .. 0.92
   3 !   18.8   0.9   4.9e-07    0.0011       2      45 ..      70     112 ..      70     122 .. 0.88
   4 !   20.6   0.5   1.3e-07   0.00028      32      51 ..     140     159 ..     117     162 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 6.9e-05
   EF-hand_8 32 frefDtdgdGkisfeEFc 49
                f+++D +++G i+ +EF+
  EPX73507.1 30 FKKIDANHSGSIDRNEFL 47
                99***************7 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.0002
   EF-hand_8 31 lfrefDtdgdGkisfeEFcvl 51
                lf+ +D+dg G ++f EF++ 
  EPX73507.1 61 LFSVVDEDGGGDVDFQEFINS 81
                8*****************985 PP

  == domain 3  score: 18.8 bits;  conditional E-value: 4.9e-07
   EF-hand_8   2 kgkItreelrrilrilglkkglseee.vdilfrefDtdgdGkisf 45 
                 +g ++++e+   l+++ ++   ++ee ++  f+  D+d+dG+is 
  EPX73507.1  70 GGDVDFQEFINSLSVFSIH--GNKEEkLRFAFKIYDIDRDGYISN 112
                 5899*******99999999..788887****************95 PP

  == domain 4  score: 20.6 bits;  conditional E-value: 1.3e-07
   EF-hand_8  32 frefDtdgdGkisfeEFcvl 51 
                 ++e+D d+dGkisfeEF ++
  EPX73507.1 140 IMEVDKDCDGKISFEEFKQV 159
                 679**************986 PP

>> SPARC_Ca_bdg  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   1.1e-05     0.026      48     111 ..      18      79 ..       3      81 .. 0.89
   2 !   15.1   0.2   9.4e-06     0.021      53     111 ..      92     157 ..      85     159 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.1e-05
  SPARC_Ca_bdg  48 nlkeckepvawkFsklDtnsdkvlsksELaplraplvklehCikpflescDadkdkkislkEwc 111
                   +++e    ++ +F+k+D n+ ++++++E  ++ +  + ++   +++++  D d  ++++ +E++
    EPX73507.1  18 FTNEEIARIRKRFKKIDANHSGSIDRNEFLSIPS--IANNPLASRLFSVVDEDGGGDVDFQEFI 79 
                   556667788999********************99..9*************************97 PP

  == domain 2  score: 15.1 bits;  conditional E-value: 9.4e-06
  SPARC_Ca_bdg  53 kepvawkFsklDtnsdkvlsksELaplraplv.......klehCikpflescDadkdkkislkEwc 111
                   +e++++ F+  D ++d+++s+ EL  + + +v       +l++ +++ +++ D d d+kis +E+ 
    EPX73507.1  92 EEKLRFAFKIYDIDRDGYISNGELFLVLKMMVgnnlredQLQQIVDKTIMEVDKDCDGKISFEEFK 157
                   67899*******************988776642222222667888999999*************96 PP

>> EF-hand_4  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0     0.095   2.1e+02      34      66 ..      12      47 ..       3      54 .. 0.72
   2 !    6.6   0.1    0.0033       7.5      46      69 ..      59      82 ..      49      92 .. 0.80
   3 !    5.9   0.0    0.0056        13      40      72 ..      90     122 ..      80     125 .. 0.83
   4 !   10.8   0.4   0.00016      0.36      34      66 ..     121     157 ..     117     162 .. 0.73

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.095
   EF-hand_4 34 vlknskleedkleki...wdladidedgkldfeefc 66
                ++ ns ++++++++i   ++  d ++ g++d +ef 
  EPX73507.1 12 LISNSTFTNEEIARIrkrFKKIDANHSGSIDRNEFL 47
                678999999998888322344566678999999995 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0033
   EF-hand_4 46 ekiwdladidedgkldfeefciam 69
                ++++++ d d  g++df+ef+ ++
  EPX73507.1 59 SRLFSVVDEDGGGDVDFQEFINSL 82
                5778888999999*******8665 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.0056
   EF-hand_4  40 leedklekiwdladidedgkldfeefciamrli 72 
                  +e+kl   +++ did dg +   e+ ++++++
  EPX73507.1  90 NKEEKLRFAFKIYDIDRDGYISNGELFLVLKMM 122
                 578899999************999998888875 PP

  == domain 4  score: 10.8 bits;  conditional E-value: 0.00016
   EF-hand_4  34 vlknskleedklekiwdla....didedgkldfeefc 66 
                 ++   +l+ed+l++i d +    d d dgk+ feef 
  EPX73507.1 121 MMVGNNLREDQLQQIVDKTimevDKDCDGKISFEEFK 157
                 55667899*****998753232255668********5 PP

>> EF-hand_9  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       1.3   2.9e+03      39      60 ..      28      48 ..      10      52 .. 0.69
   2 ?    2.5   0.0      0.08   1.8e+02       2      29 ..      60      87 ..      59      97 .. 0.78
   3 ?    8.7   0.1   0.00097       2.2       3      64 ..      98     162 ..      96     163 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 1.3
   EF-hand_9 39 elakelDPdgedasvdldtflr 60
                +  k++D ++  +s+d + fl 
  EPX73507.1 28 KRFKKIDANHS-GSIDRNEFLS 48
                55567777777.8888888876 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.08
   EF-hand_9  2 tvFevcDtqktGrVpvsrlidyLravta 29
                ++F+v D +  G V  ++ i+ L     
  EPX73507.1 60 RLFSVVDEDGGGDVDFQEFINSLSVFSI 87
                6899*********999999988876655 PP

  == domain 3  score: 8.7 bits;  conditional E-value: 0.00097
   EF-hand_9   3 vFevcDtqktGrVpvsrlidyLravtaqdpeeseLeelak....elDPdgedasvdldtflrvmre 64 
                  F+++D+++ G +   +l  +L+ + +++  e +L++       e+D d  d+++ ++ f++v+++
  EPX73507.1  98 AFKIYDIDRDGYISNGELFLVLKMMVGNNLREDQLQQIVDktimEVDKDC-DGKISFEEFKQVVSN 162
                 59**********************99999999988877541111556444.589999999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       668  (0.0372581); expected 358.6 (0.02)
Passed bias filter:                      421  (0.0234815); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.44u 0.31s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 1178.72
//
Query:       EPX73508.1  [L=558]
Description: NuA4 histone acetyltransferase complex Epl1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-19   70.8   2.5    3.6e-19   69.7   2.5    1.6  1  EPL1      Enhancer of polycomb-like


Domain annotation for each model (and alignments):
>> EPL1  Enhancer of polycomb-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.7   2.5     2e-23   3.6e-19       1     157 []      12     159 ..      12     159 .. 0.82

  Alignments for each domain:
  == domain 1  score: 69.7 bits;  conditional E-value: 2e-23
        EPL1   1 rqprldikkkLkviseeevdgldeseseeeiseknsnkensqqavetgvdkkeenekh.q.viaaakkkesssasskeslkkeelkLpkP......... 88 
                 rq+++ ik+ +++  e++++++de+ s+++         +   +vetgv+k+ee+ekh q vi+aa+++  + +++k       + +p+          
  EPX73508.1  12 RQRKVGIKTVMPICLEKDIPDFDEEVSQQR---------T-VPQVETGVEKEEEEEKHlQqVINAAHEAIIRGETKK-------VVIPTReaksigvvd 93 
                 799**************9999997765543.........2.356999********************9998888774.......444444333333226 PP

        EPL1  89 sfreferp...pssyirfsekseeelddeveYdMDEeDekWLeelnekrkkegvekisediFEivmdrlEke 157
                 ++ +  r    p++ +rfs ++ee++  + eY+MDE+D+k+ +el ++  +++++k+se +FE vm+ lE e
  EPX73508.1  94 KYYK--RDflcPKTSLRFSLTVEECI--SPEYCMDEQDQKFFDELKNS--QSSLSKCSETDFEWVMQILEDE 159
                 3333..33678***************..9****************999..6779****************76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (558 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       740  (0.0412739); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 4131.85
//
Query:       EPX73509.1  [L=772]
Description: AAA family ATPase Grc3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      2e-30  106.0   0.0    3.3e-30  105.3   0.0    1.3  1  CLP1_P        mRNA cleavage and polyadenylation factor CLP1 P
     0.0014   18.9   0.0     0.0036   17.6   0.0    1.6  1  AAA_22        AAA domain
     0.0076   16.8   0.4      0.016   15.7   0.0    1.8  2  AAA_18        AAA domain
  ------ inclusion threshold ------
      0.021   15.2   0.0      0.046   14.1   0.0    1.6  1  RNA_helicase  RNA helicase
      0.029   13.7   0.0      0.059   12.7   0.0    1.4  1  FtsK_SpoIIIE  FtsK/SpoIIIE family
      0.044   13.7   0.0       0.12   12.3   0.0    1.7  1  ATPase_2      ATPase domain predominantly from Archaea
      0.052   12.5   0.0      0.087   11.8   0.0    1.2  1  MeaB          Methylmalonyl Co-A mutase-associated GTPase Mea
      0.062   13.1   0.0       0.15   11.8   0.0    1.7  1  ATP_bind_1    Conserved hypothetical ATP binding protein
      0.078   13.5   0.0       0.31   11.5   0.0    1.9  2  ABC_tran      ABC transporter
        1.4    8.0   8.6          2    7.5   8.6    1.2  1  SOG2          RAM signalling pathway protein


Domain annotation for each model (and alignments):
>> CLP1_P  mRNA cleavage and polyadenylation factor CLP1 P-loop
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.3   0.0   1.8e-33   3.3e-30       1     144 [.     377     523 ..     377     540 .. 0.87

  Alignments for each domain:
  == domain 1  score: 105.3 bits;  conditional E-value: 1.8e-33
      CLP1_P   1 GpkdsGKSTlarlLlNyalrkgrkpvyvDlDvGqseispPgtislalverpidveegfsl...daplvyffGdtspsdnpslylalvkelareveekle 96 
                 Gpk +GKST++r++ N++l+++  ++++D+D+Gq+e+ p g isl ++++p++++++ +l    + +  + G+++p+++p++yla + +l+ e++ k++
  EPX73509.1 377 GPKGAGKSTCCRYITNRLLNSSDYVAFLDIDPGQPEVIPVGNISLYFMDSPLQGPAFSRLppnSRCFRVHTGESTPQRDPTHYLASTFRLYAEYQ-KFN 474
                 9***************************************************8877755422244467999************************.777 PP

      CLP1_P  97 enkkakasg...liIntpGwvkglgaellleliealepdvvvvldqeelln 144
                  +++ + ++   li+n+pGw+kg gaell +l++ + p+ v++l+++  ++
  EPX73509.1 475 IERELEGKPpisLIVNCPGWIKGGGAELLFNLVNQISPTEVAYLSRN--YQ 523
                 7777776654559*******************************974..33 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0     2e-06    0.0036       8      31 ..     373     396 ..     371     424 .. 0.87

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 2e-06
      AAA_22   8 lvvtGesGtGKTtllrrlleqlde 31 
                 l+v+G++G+GK+t++r ++++l +
  EPX73509.1 373 LLVCGPKGAGKSTCCRYITNRLLN 396
                 68******************9965 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.2   0.5        10   1.8e+04     108     121 ..      31      44 ..      25      59 .. 0.53
   2 !   15.7   0.0     9e-06     0.016       2      33 ..     374     402 ..     373     420 .. 0.86

  Alignments for each domain:
  == domain 1  score: -4.2 bits;  conditional E-value: 10
      AAA_18 108 eRlekRgyeeakik 121
                 +Rl++ +++++++k
  EPX73509.1  31 RRLNRENNSTKDKK 44 
                 44444444444433 PP

  == domain 2  score: 15.7 bits;  conditional E-value: 9e-06
      AAA_18   2 lltGtpGvGKttlakeLskrlgfgvnlrdvak 33 
                 l++G+ G+GK+t ++++ +rl    n++d+++
  EPX73509.1 374 LVCGPKGAGKSTCCRYITNRL---LNSSDYVA 402
                 79***************9996...77777765 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   2.6e-05     0.046       2      26 ..     374     398 ..     373     424 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2.6e-05
  RNA_helicase   2 wlyGpsgeGKStlakeLakallkkl 26 
                   +++Gp+g GKSt++++++++ll+++
    EPX73509.1 374 LVCGPKGAGKSTCCRYITNRLLNSS 398
                   79*******************9876 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   3.3e-05     0.059      35      81 ..     366     410 ..     354     420 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 3.3e-05
                   GGGS-.SEEEE--TTSSHHHHHHHHHHHHHTT--TTTEEEEEE-TTS CS
  FtsK_SpoIIIE  35 lkkmashllvaGatgsGKStalntLilSlatthtPeeVqliliDykg 81 
                    k +++ llv+G +g GKSt+ + +   l+   + + V+++ iD++ 
    EPX73509.1 366 NKDVPPKLLVCGPKGAGKSTCCRYITNRLLN--SSDYVAFLDIDPGQ 410
                   4556679***************987766665..88999999999986 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   6.6e-05      0.12      23      54 ..     373     404 ..     359     407 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 6.6e-05
    ATPase_2  23 yfiYGpegsGKtaLlkeiienledkdkyviyy 54 
                 +++ Gp+g GK++  + i ++l+++++yv ++
  EPX73509.1 373 LLVCGPKGAGKSTCCRYITNRLLNSSDYVAFL 404
                 6899**************************97 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   4.9e-05     0.087      31      70 ..     372     411 ..     345     414 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 4.9e-05
                 EEEEEE-TTSSHHHHHHHHHHHHHCTT--EEEEEE----- CS
        MeaB  31 vvGltGvPGaGkstlvealglelrrrGkrvavlavDPssp 70 
                 ++ + G  GaGkst    ++ +l +    va l +DP+ p
  EPX73509.1 372 KLLVCGPKGAGKSTCCRYITNRLLNSSDYVAFLDIDPGQP 411
                 66688999*****************************976 PP

>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   8.6e-05      0.15       1      36 [.     375     410 ..     375     414 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 8.6e-05
  ATP_bind_1   1 vvGpaGsGKttfvgalseilelrgrsvavvNLDPAa 36 
                 v+Gp G+GK+t ++ +++ l ++   va + +DP+ 
  EPX73509.1 375 VCGPKGAGKSTCCRYITNRLLNSSDYVAFLDIDPGQ 410
                 89*****************9999999*******986 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1       3.2   5.7e+03      52      73 ..      52      73 ..      27     125 .. 0.63
   2 ?   11.5   0.0   0.00018      0.31      14      48 ..     373     407 ..     370     444 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 3.2
                B-HHHCCHCEEEE-SS--S-TT CS
                xxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 52 qeleslrkeigvlpqepqlfpe 73
                 + e+++k+++ ++++p+   +
  EPX73509.1 52 SPNEKAEKHVQSVEENPTSLGD 73
                4566667777777776444333 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 0.00018
                 EEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  14 vaivGenGaGKStLlkllagllkpteGeilldgkd 48 
                 + + G+ GaGKSt ++ +++ l + ++ + + + d
  EPX73509.1 373 LLVCGPKGAGKSTCCRYITNRLLNSSDYVAFLDID 407
                 5689***************9998888888665444 PP

>> SOG2  RAM signalling pathway protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   8.6    0.0011         2     161     310 ..      18     171 ..       3     285 .. 0.60

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0011
        SOG2 161 plkptaskkk.ragrtksksisttssgssstlvssaesstesrassvtytart...Rhagsfsa.qdveqGaalt.plrsdqipfnlsrsrrssssgns 253
                 + +p+a+ ++ +a r++ + +st++++++ +  +s +++ e++ +sv  ++ +   R+a+ +++ q + +G     + +  ++p++ s ++++++ +  
  EPX73509.1  18 EASPKAPLSTfAARRLNRENNSTKDKKKKGKRSESPNEKAEKHVQSVEENPTSlgdRSASKQTSfQVLVPGIDRSgK-NGIDQPMP-SHVIEDKNGKDK 114
                 22344444443222223333333332222222222222222222233322222445666555321455555555531.22233333.445555555666 PP

        SOG2 254 aspaangaqsetsersasssgvqssasstPlgegstspp.galsrqslsttgststlt 310
                 +s  a ++++et ++++++ +++ss + +P  +++++++  +++++s++t+ +++++t
  EPX73509.1 115 LSTRAFVQTTETEPSRTEE-NSPSSLPASPSLAEADANSrPSTPSTSYNTSLQKQEPT 171
                 6666666666666644443.34555455455544444433344444455555544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (772 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       911  (0.0508115); expected 358.6 (0.02)
Passed bias filter:                      535  (0.0298399); expected 358.6 (0.02)
Passed Vit filter:                        82  (0.0045736); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.75u 0.27s 00:00:01.02 Elapsed: 00:00:00.45
# Mc/sec: 5143.34
//
Query:       EPX73510.1  [L=88]
Description: ribosomal protein subunit YmL33 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.1e-10   41.2   0.1    1.6e-10   40.7   0.1    1.3  1  Ribosomal_L30   Ribosomal protein L30p/L7e
  ------ inclusion threshold ------
      0.057   12.1   0.0      0.066   11.9   0.0    1.0  1  Glyco_hydro_36  Glycosyl hydrolase 36 superfamily, catalytic 


Domain annotation for each model (and alignments):
>> Ribosomal_L30  Ribosomal protein L30p/L7e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.7   0.1   1.8e-14   1.6e-10       2      51 .]       5      54 ..       4      54 .. 0.98

  Alignments for each domain:
  == domain 1  score: 40.7 bits;  conditional E-value: 1.8e-14
                   EEEE-S-STTS-HHHHHHHHHTT-SSTTEEEE--SSHHHHHHHHHCCCGE CS
  Ribosomal_L30  2 fVtrirsiigvppkvrktLqlLgLrkingtvvklntpsirGmLkkVkhlV 51
                   +V++ rs+ig+p  +r ++++LgL k++++ + + +p  +G + k+k+lV
     EPX73510.1  5 RVKLQRSTIGLPRGIRSVVESLGLGKRHSVAYCEVNPMSAGKIFKIKELV 54
                   799**********************************************9 PP

>> Glyco_hydro_36  Glycosyl hydrolase 36 superfamily, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   7.3e-06     0.066     350     398 ..      25      73 ..      19      81 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 7.3e-06
  Glyco_hydro_36 350 klGrGdrafklyrkinPanledkieirkaePYvyaqfvagkdakrhGra 398
                      lG G+r    y ++nP+   ++++i++    + +q v +k+++r+ r+
      EPX73510.1  25 SLGLGKRHSVAYCEVNPMSAGKIFKIKELVSVSEVQKVLSKEEERKARS 73 
                     69*****************************************998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       367  (0.0204696); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.26s 00:00:00.62 Elapsed: 00:00:00.42
# Mc/sec: 626.24
//
Query:       EPX73511.1  [L=206]
Description: hypothetical protein SOCG_02734 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.023   14.5   2.9       0.05   13.4   2.9    1.5  1  RD3       RD3 protein
      0.056   13.2   0.1       0.26   11.1   0.0    2.1  2  rve_3     Integrase core domain


Domain annotation for each model (and alignments):
>> RD3  RD3 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   2.9   5.6e-06      0.05      38     103 ..      63     134 ..      57     142 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 5.6e-06
         RD3  38 aereqrekeeeerkaetgvDYswlastp.........rkrkqisaserleLEelCakikPsecgkvisrfrevla 103
                  e++q  +ee+e ++e++vDYs+l+ +p         r +++i++ +r+e+++    i+++e  k i+ fr++ +
  EPX73511.1  63 KEKQQASNEEDEEQQEEEVDYSKLQARPltgmgigqqRPKAKIKSIKREEVQD---TIQAAEHEKSIQDFRKRYN 134
                 47888889999999999*********998888777777777787777777776...6899999999999998876 PP

>> rve_3  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   2.9e-05      0.26      26      63 ..     108     143 ..     104     146 .. 0.80
   2 ?   -1.3   0.0      0.22     2e+03      23      36 ..     167     182 ..     164     203 .. 0.57

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 2.9e-05
       rve_3  26 lrdellneelfrslaearekleawredYNteRPHssLg 63 
                 +++e ++ +++   ae ++ ++++r++YN e+P  sL 
  EPX73511.1 108 IKREEVQDTIQ--AAEHEKSIQDFRKRYNVEKPKFSLP 143
                 66666666665..6999****************98885 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.22
       rve_3  23 ngtlrdellneel..f 36 
                 ++t+ +e+ + ++  +
  EPX73511.1 167 HNTFQNEFNSDTQrpY 182
                 6677777766665442 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (206 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1808  (0.100842); expected 358.6 (0.02)
Passed bias filter:                      631  (0.0351944); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.22s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 1491.66
//
Query:       EPX73512.1  [L=244]
Description: translation initiation factor eIF6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-82  275.6   0.8    2.1e-82  275.3   0.8    1.1  1  eIF-6     eIF-6 family


Domain annotation for each model (and alignments):
>> eIF-6  eIF-6 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  275.3   0.8   1.2e-86   2.1e-82       1     197 []       4     204 ..       4     204 .. 0.98

  Alignments for each domain:
  == domain 1  score: 275.3 bits;  conditional E-value: 1.2e-86
                 .E-BTTB--HHHH-EE-SSEEEE-TTS-HHHHHHHHHHHT..-EEEE--BTTBS-HHHH-EE-SSEEEEETT--HHHHHHHHHHHH---..EEE--SS- CS
       eIF-6   1 rlsiegsseiGvfarltnkyalvpegveeefvkaieeeLk..vevvettiagsrlvGslvvgNsngllvpstvtdeeleklkeslklev..erleeklt 95 
                 r+++e+++eiGvf++ltn+yalv+ g +e+f++++e+eL+  ++vv+tti+g+r++G+l++gN+ngllvps++td+el++l++sl+++v  +r++e+l+
  EPX73512.1   4 RAQFENNNEIGVFSTLTNSYALVALGGSENFYSVFEAELGdvIPVVHTTIGGTRIIGRLTCGNKNGLLVPSSTTDNELQHLRNSLPDSVkiQRVDERLS 102
                 789***********************8889***********99*******************************************66655******** PP

                 -HHHHEEE-SSEEEE-GGGGG.GHHHHHHHHTSEEEE--BTTBS-TTTSEEE-SSEEEE-TT--HHHHHHHHHHHT-SEEE--BTTTBS-GGGTEEE-S CS
       eIF-6  96 AlGNvilaNDkvAlvhpdlsketveiiadvLgvevvrgtiagiktvGsaavvtnkgllvhpkateeeleeleellkveveagTvNrGsklvgsglvaNd 194
                 AlGN++++ND+vAlvhpd+++et+eiiadvLgvev+r+t+ag+ + Gs+++++n+g+lvhp+++ +e++el++ll+v++ agTvNrGs+++g+glv+Nd
  EPX73512.1 103 ALGNIVACNDYVALVHPDIERETEEIIADVLGVEVFRQTVAGNVLTGSYCALSNQGALVHPRTSIQEQDELSSLLQVPLVAGTVNRGSDVIGAGLVVND 201
                 *************************************************************************************************** PP

                 S-E CS
       eIF-6 195 kga 197
                 ++a
  EPX73512.1 202 WCA 204
                 *85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       351  (0.0195772); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1842.98
//
Query:       EPX73513.1  [L=1524]
Description: myosin type V [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.4e-257  856.4  12.1   2.8e-257  855.3  12.1    1.5  1  Myosin_head      Myosin head (motor domain)
    1.3e-17   63.9   1.8    1.3e-17   63.9   1.8    3.2  4  DIL              DIL domain
    0.00021   21.6   0.0     0.0084   16.4   0.0    3.4  3  AAA_22           AAA domain
    0.00032   20.2  15.1       0.21   11.5   0.2    4.7  4  IQ               IQ calmodulin-binding motif
  ------ inclusion threshold ------
      0.037   13.7   0.1       0.15   11.7   0.0    2.1  2  Sigma54_activat  Sigma-54 interaction domain
      0.048   13.5   0.0       0.24   11.3   0.0    2.2  1  APS_kinase       Adenylylsulphate kinase
       0.11   12.8   0.0       0.48   10.8   0.0    2.1  1  AAA_16           AAA ATPase domain


Domain annotation for each model (and alignments):
>> Myosin_head  Myosin head (motor domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  855.3  12.1  1.1e-260  2.8e-257       2     677 .]      76     760 ..      75     760 .. 0.95

  Alignments for each domain:
  == domain 1  score: 855.3 bits;  conditional E-value: 1.1e-260
                  SBGCGSSS-SHHHHHHHHHHHHHTT--EEEETTEEEEE--SS--S.TSSHHHHHHHTTS-GGGSSSSHHHHHHHHHHHHHHHTSEEEEEEESSTTSSH CS
  Myosin_head   2 edlveLsllneasvlenlkkRykkdliYtysglvlvavnPykklk.iysedvikaykgkkreelpPHifaiadeayrslledkenqsilisGEsGAGK 98 
                  +dl++L +lne+svl++l +Ry++ +iYtysg+vl+a+nP+++l+ +y+ +v++ y++k+r++l+PH++aia++ ++ + ++++nq+i+isGEsGAGK
   EPX73513.1  76 DDLTNLAYLNEPSVLDALLTRYNQLQIYTYSGIVLIALNPFQSLPkLYTPEVVRVYSEKSRDQLDPHLYAIAEDSFKCMNRERKNQTIIISGESGAGK 173
                  89*******************************************9**************************************************** PP

                  HHHHHHHHHHHHHHSSSSSC..........TCTTHHHHHHHHHHHHHHHHHEEEESSETTEESSEEEEEEEEETTSSEEEEEEEEECE-GGGGT---T CS
  Myosin_head  99 teatKkvlqylasvaeskek..........veeeeleekilqsnPilEafGnAktvrndnssRFGKfieiefdakgkiagakietYLLEksRvvkqak 186
                  t++++++++y+asv+  ++           v+ + +e++il++nPi+EafGn kt rndnssRFGK+i+i fd+++ i+gaki+tYLLE+sR+v+q k
   EPX73513.1 174 TVSARYIMRYFASVQTLSDPsstanvdsdsVQLTAVENEILATNPIMEAFGNSKTSRNDNSSRFGKYIQIMFDKNSIIIGAKIQTYLLERSRLVFQPK 271
                  **************9988878999*****9999***************************************************************** PP

                  T--SBHHHHHHHHCSTHHHHHHTT--.TCCGSTTTTTTSSSSBTTS-HHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHCTSSEEEECTTSSEEE CS
  Myosin_head 187 eERnyHiFYqllagaseeekkelkle.dvkdyaylsqsgeltvdgiddseefketkkaldilglseeeqkeifrivaailhlGniefkkeakdeqavl 283
                  +ERnyHiFYqllagas+e+ +e++l+ dv+dy+yl q+++ t+dg+dd++ef+et++al+++ +++++ k+if+++aa+lh+Gnie+k +++d+  + 
   EPX73513.1 272 SERNYHIFYQLLAGASPEQLEEWNLSaDVNDYNYLRQGESPTIDGVDDAKEFQETVNALKMVSINSDTSKSIFSMLAALLHVGNIEIKGSRNDS-YID 368
                  **************************9****************************************************************996.677 PP

                  SSHHHHHHHHHHHTS-HHHHHHHHHSEEEEETTEEEEEE-BHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS....-S-SEEEEEEEEE-B--- CS
  Myosin_head 284 edeeklekaaellgvdaeelekalvkrriktgkevvskalnveqaevardalakaiyerlFdwlverinkslekkk....eekksfiGvLDiaGFEif 377
                  +++e+l +a++llgvd++++ k+l+kr+ik ++e ++k+l+ +q  v rd+++k++y+ lFdwlv  in++l +++    + ++sfiGvLDi+GFE+f
   EPX73513.1 369 SKNEHLLNASKLLGVDSSTFIKWLTKRKIKMASEGIIKPLTDYQGLVVRDSVSKFLYASLFDWLVATINTALMNSAvkqnQISESFIGVLDIYGFEHF 466
                  77788******************************************************************98876333244679************* PP

                  SSB-HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTSSGCGS-GGGCCHHHHHHHHSSSTSHHHHHHHHHTSTTS-HHHHHHHHHHHHTTST...TE CS
  Myosin_head 378 eknsFEqlcinyvnEkLqqlFnelvlklEqeeYvrEgiewkfidfgldnqaiidLiekkplGilslLdeecllpkatdetfleklvkafskha...kf 472
                  eknsFEq+ciny+nEkLqq F ++v+klEq+eY++Eg++w++id+  dnq++i +ie+  +GilslLdeec++p  +de++++kl++af+k +   ++
   EPX73513.1 467 EKNSFEQFCINYANEKLQQEFYKHVFKLEQDEYANEGLNWSYIDY-QDNQQCISMIEN-RMGILSLLDEECRMPTNSDENWVTKLNDAFDKPEfknSY 562
                  *********************************************.8***********.5*****************************886643355 PP

                  EETTSTTTTTEEEEEETTCEEEEE-TTHHHHHH----HHHHHHHHTSSSHHHHHHCCSHCHB--.........CSSSECCCCCSBHHHHHHHHHHHHH CS
  Myosin_head 473 eksrlkkgeakFiikHyAgkveYevegfleKnkDtlnedlvellksskkkllaelfkeeekeakaeakksekkkkkkkkkkkfktvgskfkeslaeLm 570
                  +k+  + g+++F+++HyA +v+Y++egf+eKnkDt++++l++l+++s+ +++++l + +  +++a++++ ++++k++k+k k +t+gs+fk+sl +Lm
   EPX73513.1 563 KKA--RFGNNSFTVRHYALDVTYNAEGFIEKNKDTISDELIDLFSESSVPFIKDLVQFRL-QQTASQDSGGSNNKRSKSKPKSNTLGSMFKNSLISLM 657
                  555..57************************************************99854.5777888888899999999999*************** PP

                  HHHCTSEEEEEEEE-SSSS--TT---HHHHHHHHHHTTHHHHHHHHHHSSSEEEEHHHHHHHHGGGSTTSS-SS.SSSHHHHHHHHHHHTTS-GCGEE CS
  Myosin_head 571 ktlestnphfvRCikpnekkkakkldeslvleqlrclGvlegirirraGfpnRitfeefvqrYkllakkelkkllkedakkaveailkeleldkeeyk 668
                   t+++tn+h++RCikpne+k+a+k+d+ +v++qlr++Gvle+i+i++aGfp+R+tfe+fv++Y++l++++  +   ++  ++++ail++ ++d+ +y+
   EPX73513.1 658 GTINETNAHYIRCIKPNEQKEAWKFDNVMVTSQLRACGVLETIKISCAGFPSRWTFEDFVSQYYMLVPSADRS---DNPLTFTTAILSK-TIDSAKYQ 751
                  ********************************************************************99633...5788899999987.6899**** PP

                  ECSSEEEET CS
  Myosin_head 669 iGktKiFfr 677
                  iGk+KiFfr
   EPX73513.1 752 IGKSKIFFR 760
                  ********8 PP

>> DIL  DIL domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       4.1     1e+04      39      76 ..     290     342 ..     287     351 .. 0.58
   2 ?   -2.5   0.1       2.5   6.3e+03       2      22 ..     428     448 ..     428     453 .. 0.80
   3 ?   -1.8   0.2       1.4   3.7e+03       3      89 ..     927    1008 ..     926    1020 .. 0.55
   4 !   63.9   1.8   5.2e-21   1.3e-17       3     101 ..    1319    1413 ..    1318    1416 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 4.1
                 HHHHCCTS-.....................-GGGGHHHHHHHHHHHC-S--HHH CS
         DIL  39 lledWaeeqgle................eaaekhlapliqaaqllqlpkssled 76 
                 +le+W  + +++                +   k++++ + a++++++++ + ++
  EPX73513.1 290 QLEEWNLSADVNdynylrqgesptidgvD-DAKEFQETVNALKMVSINSDTSKS 342
                 56666665555444455555566665532.246778888888888887774433 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 2.5
                 HHHHHHHHHHHHHHHHHHHHS CS
         DIL   2 lfsqlfyfinaelfNrlllrk 22 
                 lf  l+  in+ l+N+ ++++
  EPX73513.1 428 LFDWLVATINTALMNSAVKQN 448
                 57889999*******998655 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 1.4
                  HHHHHHHHHHHHHHHHHHHS-SB-HHHHHHHHHHHHHHHHCCTS-.....-GGGGHHHHHHHHHHHC-S--HHHHHHHC.TT-TSS- CS
         DIL    3 fsqlfyfinaelfNrlllrkklcsrskGlqlrrnlslledWaeeqgleeaaekhlapliqaaqllqlpkssledlesilrstcpaLn 89  
                  f+q+ y +  +lfN   + +   s +   +l+ ++ +le+ +++     +a+   ++  + +++l +++s+ ++ + +l++  ++L+
  EPX73513.1  927 FKQVSYKLESKLFNMTKKLD--ESEQENTKLKDRIFELESHLSN---YAEATLSKERELEQTHVLLSDHSQDQEYKLALSEKEKELS 1008
                  67777777777777544333..3666667777777777776664...2223333333344455555555544555444555555555 PP

  == domain 4  score: 63.9 bits;  conditional E-value: 5.2e-21
                  HHHHHHHHHHHHHHHHHHHS-SB-HHHHHHHHHHHHHHHHCCTS-.....-GGGGHHHHHHHHHHHC-S--HHHHHHHC.TT-TSS-HHHHHHHHTT CS
         DIL    3 fsqlfyfinaelfNrlllrkklcsrskGlqlrrnlslledWaeeqgleeaaekhlapliqaaqllqlpkssledlesilrstcpaLnsaQlkrllen 99  
                  +s l++fi++e+fN+l++++k  s+++G+++++n+s+l +W++++g+  +a+ +l++++qa+++lq+ +++++ l + + s ++ Ln++Ql++ll +
  EPX73513.1 1319 ISSLYRFIDVEAFNALMTKEK-GSWKRGVNMSYNFSRLREWCTHRGVV-EATLQLEEISQASKFLQTCMNKQKIL-DNV-SLLWILNMQQLRKLLDK 1411
                  799**************8666.7*********************9986.79******************954444.555.69*************** PP

                  B- CS
         DIL  100 Yr 101 
                  Y 
  EPX73513.1 1412 YV 1413
                  *6 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   3.3e-06    0.0084       4      83 ..     159     242 ..     156     254 .. 0.74
   2 ?   -0.3   0.0      0.46   1.2e+03      41      95 ..     328     381 ..     290     389 .. 0.78
   3 ?   -1.8   0.0       1.3   3.4e+03      37      85 ..     456     524 ..     438     534 .. 0.72

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 3.3e-06
      AAA_22   4 tagilvvtGesGtGKTtllrrlleqldeeakaee....erpevvfvtlpsstsskdllrellralglelkaerlsseelleale 83 
                 + + +++ GesG+GKT+++r +++ +  ++   +    ++++  +v+l++ ++     + + +a+g+++ +++++s+++ ++++
  EPX73513.1 159 KNQTIIISGESGAGKTVSARYIMRYFASVQTLSDpsstANVDSDSVQLTAVENEILATNPIMEAFGNSKTSRNDNSSRFGKYIQ 242
                 67789******************9998887777765444444448888888877777888888888877776666666556665 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.46
      AAA_22  41 evvfvtlpsstsskdllrellralglelka.erlsseellealeqalraraviell 95 
                   +++   +s +sk+++++l+  l++++ + ++ +++ +++  +++l ++++  ll
  EPX73513.1 328 NALKMVSINSDTSKSIFSMLAALLHVGNIEiKGSRNDSYIDSKNEHLLNASK--LL 381
                 445666667788*************999998777777777888888877776..55 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 1.3
      AAA_22  37 e............erpevvfvtlpsstsskdllrellralglelka........erlsseellealeqa 85 
                              ++ e++ ++ ++++ ++++++++++  ++e  +          ++++++++++e+ 
  EPX73513.1 456 GvldiygfehfekNSFEQFCINYANEKLQQEFYKHVFKLEQDEYANeglnwsyiDYQDNQQCISMIENR 524
                 355555555555567788899999999999999999998888777788888888888888888888765 PP

>> IQ  IQ calmodulin-binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.7      0.65   1.7e+03       2      18 ..     800     816 ..     799     819 .. 0.82
   2 !    7.5   0.0    0.0015       3.9       2      20 ..     825     843 ..     824     844 .. 0.94
   3 !   11.5   0.2   8.1e-05      0.21       2      19 ..     848     865 ..     847     867 .. 0.89
   4 !    8.2   1.4   0.00094       2.4       1      20 [.     895     914 ..     895     915 .. 0.89

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.65
                 HHHHHHHHHHHHHHHHH CS
          IQ   2 kaaikIQaawRGylaRk 18 
                 k + ++Qa   Gyl R+
  EPX73513.1 800 KRVSRFQAMAHGYLSRR 816
                 56778999999*****9 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0015
                 HHHHHHHHHHHHHHHHHHH CS
          IQ   2 kaaikIQaawRGylaRkry 20 
                 k++++I + w+ ++ R+++
  EPX73513.1 825 KSITIISSLWKTHVERRKF 843
                 89***************99 PP

  == domain 3  score: 11.5 bits;  conditional E-value: 8.1e-05
                 HHHHHHHHHHHHHHHHHH CS
          IQ   2 kaaikIQaawRGylaRkr 19 
                 ++++ +Q+a+RG+l R++
  EPX73513.1 848 ASILFLQSAVRGFLFRRN 865
                 68999***********97 PP

  == domain 4  score: 8.2 bits;  conditional E-value: 0.00094
                 HHHHHHHHHHHHHHHHHHHH CS
          IQ   1 rkaaikIQaawRGylaRkry 20 
                 r + i+IQ+ +R+  a++++
  EPX73513.1 895 RHCTIRIQSLIRMKHAMRQL 914
                 5789************9985 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   5.9e-05      0.15      20      45 ..     158     183 ..     144     229 .. 0.77
   2 ?   -3.2   0.0       2.3   5.8e+03     122     150 ..     865     893 ..     862     901 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 5.9e-05
                      TSSS-EEEECSTTSSHHHHHHHHHHH CS
  Sigma54_activat  20 ktdlsvlitGesGtGKellaraihea 45 
                      +++ +++i GesG+GK++ ar i + 
       EPX73513.1 158 RKNQTIIISGESGAGKTVSARYIMRY 183
                      56789*****************9873 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 2.3
                      EESBTSSSEEE--EEEEEEESS-HHHHHH CS
  Sigma54_activat 122 vervGsskeikvdvriiaatnedleeave 150
                       +rvG  ++  ++++ +  t+++ ++ ++
       EPX73513.1 865 NQRVGRMEQAAASIKNVWKTHRERQSFMK 893
                      57999999999999999999998777665 PP

>> APS_kinase  Adenylylsulphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   9.3e-05      0.24       3      97 ..     161     271 ..     159     332 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 9.3e-05
                 EEEEEESSTTSSHHHHHHHHHHHHHHTT.....--EEEEEHHHHTTT...........TTTT--SSHHHHHHHHHHHHHHHHHHHHTT-EEEEE----S CS
  APS_kinase   3 vvvwltGlsgsGKstianalekkLvekg.....isvylLdGdnvRhg...........LnkdLgfseedRkenirrvaevaklladaglivlvafisPy 85 
                  ++ ++G sg+GK+  a+ + ++  + +      s+  +d d+v              + +  g s+  R+ n  r ++  + + d+++i++ a i  y
  EPX73513.1 161 QTIIISGESGAGKTVSARYIMRYFASVQtlsdpSSTANVDSDSVQLTaveneilatnpIMEAFGNSKTSRNDNSSRFGKYIQIMFDKNSIIIGAKIQTY 259
                 68999*********999999887765432222367889999999754222222111123456899********************************** PP

                 HHHHHHHHHHHH CS
  APS_kinase  86 reeReaarelle 97 
                   eR++     +
  EPX73513.1 260 LLERSRLVFQPK 271
                 999876543333 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00019      0.48      24      48 ..     159     184 ..     142     224 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00019
      AAA_16  24 p.elvllsGesGvGKsslvrellral 48 
                   + +++sGesG GK+  +r ++r++
  EPX73513.1 159 KnQTIIISGESGAGKTVSARYIMRYF 184
                 23789***************999754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1524 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1435  (0.0800379); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.97u 0.28s 00:00:01.25 Elapsed: 00:00:00.45
# Mc/sec: 10187.19
//
Query:       EPX73514.1  [L=431]
Description: BAR adaptor protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.3e-31  107.8   3.3    9.7e-31  107.2   3.3    1.3  1  BAR            BAR domain
      6e-10   38.6   0.0    1.2e-09   37.7   0.0    1.5  1  SH3_1          SH3 domain
    5.5e-09   35.7   0.0    1.2e-08   34.7   0.0    1.6  1  SH3_9          Variant SH3 domain
    0.00015   21.3   0.0    0.00033   20.3   0.0    1.6  1  SH3_2          Variant SH3 domain
     0.0036   17.3   1.9     0.0096   16.0   1.9    1.7  1  Prefoldin_3    Prefoldin subunit
  ------ inclusion threshold ------
      0.041   13.0   1.3      0.068   12.3   1.3    1.3  1  Na_K-ATPase    Sodium / potassium ATPase beta chain
       0.15   11.5   2.1       0.22   10.9   0.8    1.7  2  Peptidase_C98  Ubiquitin-specific peptidase-like, SUMO isopep
        1.2    9.8   4.7        1.1    9.8   1.0    2.3  2  DUF2385        Protein of unknown function (DUF2385)


Domain annotation for each model (and alignments):
>> BAR  BAR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.2   3.3   4.3e-34   9.7e-31      11     235 ..       9     222 ..       6     226 .. 0.93

  Alignments for each domain:
  == domain 1  score: 107.2 bits;  conditional E-value: 4.3e-34
         BAR  11 lleekvgkaekTkLDedFeelerrldvteklieklvkelkeylqanpgarakqivleklkeqplelLaesmieagkelgedssfgkalekygeavkkla 109
                 + +e + ++++++L + F +le+++ v e+ i+kl ++ +++ +++ g r++    ek k  p e+++++m  +gk l +ds++g al+ yg+++ k++
  EPX73514.1   9 WSTERLPTDQRIQLPDSFLQLEEEIGVREEGITKLYQAGNAWIESL-GKRVDGE--EKEKCFPIEKMGQVMVSHGKALPNDSPYGAALVNYGQVQLKIG 104
                 5667777889999*******************************55.5555555..46689************************************** PP

         BAR 110 qteeelekrvetnfldplrellekefkeiqkerkklehkrlDyDaakarlkklktkkskkakdeekaeeelrkAqqkfeesneelkaeLpnllalevef 208
                 +++  +  r++ + ld l+++l  ++k+++ +rkkle++r  y +   +  k+k+       +++++ee++r A+ kfees e ++ ++  l + e+++
  EPX73514.1 105 ELLGFFTNRANACYLDFLKRYL-VQMKDYHTARKKLESRRQTYESLLMKAYKAKK-------EDPRLEEDIRLASYKFEESTENVRSRMVALKEAETDQ 195
                 **********************.*****************************993.......33678******************************** PP

         BAR 209 vnqlqafveaqldfhkqaaqlleqlqq 235
                  +q+++++  qld++k+a + l+++ +
  EPX73514.1 196 QQQMTQLLTHQLDYFKEATKALANVHE 222
                 **********************99975 PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.7   0.0   5.2e-13   1.2e-09       1      48 []     292     344 ..     292     344 .. 0.97

  Alignments for each domain:
  == domain 1  score: 37.7 bits;  conditional E-value: 5.2e-13
                 EESSSBEXSSTTBXEBSTTEEEEEEEECSSSEEEEEETTS.....TEEEEEEG CS
       SH3_1   1 iAlYDYeaeesdELsfkkGDviivleksedgWwkgrlkgt.....gkeGliPs 48 
                 +AlY +++++s EL+f+ GD i v++k  ++W+ g  ++t     gk G++P+
  EPX73514.1 292 QALYTFTGRNSKELDFNAGDLISVSHKLSEDWYVGGKMNTqmevlGKSGMFPA 344
                 59*************************************99***********6 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.7   0.0   5.4e-12   1.2e-08       1      47 [.     293     346 ..     293     348 .. 0.89

  Alignments for each domain:
  == domain 1  score: 34.7 bits;  conditional E-value: 5.4e-12
       SH3_9   1 AlypyepreddeLsLqrGDvitvieesedgWlegs.....l..tGrtGlvPany 47 
                 Aly ++ r+  eL +++GD i v+++ +++W+ g      +   G++G +Pany
  EPX73514.1 293 ALYTFTGRNSKELDFNAGDLISVSHKLSEDWYVGGkmntqMevLGKSGMFPANY 346
                 89*****************************99965654436789********* PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   1.5e-07   0.00033       2      55 ..     291     348 ..     290     350 .. 0.87

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 1.5e-07
                 EEESS-B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEEC.......CCEEEEEGCGEE CS
       SH3_2   2 vraiedyvgedkseLsfkkGdvikvlslgskdsdgwwegevg.......GrvGlfPsslve 55 
                 v+a+ +++g +  eL f +Gd+i v     k s++w+ g ++       G+ G fP ++++
  EPX73514.1 291 VQALYTFTGRNSKELDFNAGDLISVS---HKLSEDWYVGGKMntqmevlGKSGMFPANYCR 348
                 6788899******************9...9******9998863667777777*****9976 PP

>> Prefoldin_3  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   1.9   4.3e-06    0.0096       3      87 ..     135     217 ..     133     224 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 4.3e-06
  Prefoldin_3   3 slyklreweaeydglkeeisalkeeddateedllriardfegslvtekEveeilGekqgvtrskqQvvdlisrRiDYVkqniktl 87 
                   ++kl+   + y++l  +  + k+ed+  eed++  + +fe s  + +    ++  k+  t ++qQ+ +l+++ +DY k+  k l
   EPX73514.1 135 ARKKLESRRQTYESLLMKAYKAKKEDPRLEEDIRLASYKFEESTENVR--SRMVALKEAETDQQQQMTQLLTHQLDYFKEATKAL 217
                  6789999*********999999999****************9965555..4555666666799****************998877 PP

>> Na_K-ATPase  Sodium / potassium ATPase beta chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   1.3     3e-05     0.068      63     151 ..     159     248 ..     148     256 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 3e-05
  Na_K-ATPase  63 kePkyqdrlssPGltirPkleeeesleivfnasdaksykkyveeLekfLekyndseqeeknie..ckegkyfeqeeeeaeekekkaCqfkr 151
                  + P+ +++++  +  ++ ++e+ +s  ++ ++ ++++ +++++ L++ L+  ++++++ +n++  c++  + +++e ++ ++++++C++++
   EPX73514.1 159 EDPRLEEDIRLASYKFEESTENVRSRMVALKEAETDQQQQMTQLLTHQLDYFKEATKALANVHelCSSS-ISQNQEVTQAKSDDEVCEVDL 248
                  56677777777777777778888999999**********************888777755555579844.4444444569999*****987 PP

>> Peptidase_C98  Ubiquitin-specific peptidase-like, SUMO isopeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.8   9.9e-05      0.22       3      55 ..     109     161 ..     107     208 .. 0.70
   2 ?   -0.5   0.2      0.31   6.8e+02      26      61 ..     188     223 ..     181     248 .. 0.56

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 9.9e-05
  Peptidase_C98   3 qWknkenlCWLDsllvalvhletlkkalseleseeeslvkrlltkyeqaqall 55 
                    +++n+ n C+LD l   lv+++  ++a+++les++++    l+++y+  ++  
     EPX73514.1 109 FFTNRANACYLDFLKRYLVQMKDYHTARKKLESRRQTYESLLMKAYKAKKEDP 161
                    579**********************9999999999998888888898766543 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.31
  Peptidase_C98  26 lkkalseleseeeslvkrlltkyeqaqallketqkk 61 
                    lk+a ++++++ ++l+ + l  +++a+++l + ++ 
     EPX73514.1 188 LKEAETDQQQQMTQLLTHQLDYFKEATKALANVHEL 223
                    566666666666666666666666666665555544 PP

>> DUF2385  Protein of unknown function (DUF2385)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.1      0.32   7.1e+02       5      62 ..      99     156 ..      95     162 .. 0.82
   2 ?    9.8   1.0   0.00049       1.1      26      82 ..     176     236 ..     168     246 .. 0.78

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.32
     DUF2385   5 qllrLaeiLGalhyLrelCgaeedqewrermkelleaeaasearrarlveaFNrgyrs 62 
                   l++ e+LG  +   + C  +  +++  +mk+  +a ++ e+rr+   +   ++y++
  EPX73514.1  99 VQLKIGELLGFFTNRANACYLDFLKRYLVQMKDYHTARKKLESRRQTYESLLMKAYKA 156
                 5578899999999999999999999999999999999999999998877766666665 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00049
     DUF2385  26 eedqewrermkelleaeaasearrarlvea....FNrgyrsyasvyrtCteaaaaaeerll 82 
                 e++++ r+rm +l eae+ ++++ ++l       F ++ ++ a+v++ C+++ ++ +e + 
  EPX73514.1 176 ESTENVRSRMVALKEAETDQQQQMTQLLTHqldyFKEATKALANVHELCSSSISQNQEVTQ 236
                 567889*************99777777532233399999**********998777666544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (431 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1255  (0.0699983); expected 358.6 (0.02)
Passed bias filter:                      518  (0.0288917); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.41
# Mc/sec: 3174.23
//
Query:       EPX73515.1  [L=841]
Description: aminopeptidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.8e-42  143.6   0.1    8.8e-42  143.0   0.1    1.3  1  Peptidase_M28  Peptidase family M28
      8e-05   22.4   0.0    0.00012   21.8   0.0    1.4  1  Peptidase_M20  Peptidase family M20/M25/M40
  ------ inclusion threshold ------
      0.034   14.2   0.5      0.034   14.2   0.5    2.9  2  NPCC           Nuclear pore complex component
       0.19   10.7   0.0       0.78    8.7   0.0    1.8  2  Peptidase_M42  M42 glutamyl aminopeptidase


Domain annotation for each model (and alignments):
>> Peptidase_M28  Peptidase family M28
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.0   0.1     2e-45   8.8e-42       1     191 [.     127     310 ..     127     317 .. 0.95

  Alignments for each domain:
  == domain 1  score: 143.0 bits;  conditional E-value: 2e-45
                    EEEEEESTTCESE.EEEEEEE--B-TTTTCCT---TTTTHHHHHHHHHHHHHCHHGGCCSSEEEEEEEESSCSGSSHHHHHHHHHHCCCTTEEEEE CS
  Peptidase_M28   1 Nviatlegkatde.vlllgAHyDsvgvgrgpifvGAdDnAsgvaalLelarvlaasgsrpkrgvrflffdaEEagllGSkafakakpelkkiaavl 95 
                    N++  ++gk++++  +ll+AHyDsv++  g+   G +D+++gvaa Lel r+ a+  ++p+r++++ f++aEE +l+G++afa a++ +k++ a++
     EPX73515.1 127 NILIHFQGKNRQRlPILLSAHYDSVST--GK---GTTDDGMGVAATLELCRYYAK--HQPERDLIVNFNNAEEDYLYGARAFA-AHELSKNVTAFV 214
                    888999999997779************..**...********************8..79************************.************ PP

                    EECS-SSSS--EEEHHHHHHCHHHHHHHHHHHHHTT-TTSCCEEEEESSTT-STTHHHH..TTT--EEEECTSSS-TTTTSTTSSGGGB-HHHHHH CS
  Peptidase_M28  96 nlDmvgsggkellfesgdkssselekelkalakpvgraaaedpfdersgrgrsDhspfl..kagvpvldlaetgfpevyHtprDtldnidkdtlar 189
                    nl+ +gsggk++lf  +++++   ++++++  +p++++  +d+f++r +r+++D+++++  ++g  +ld+a+ ++++ yHt++D+l+++ +++l++
     EPX73515.1 215 NLEGAGSGGKAMLF--RSSNHYVTKAYFRKNKYPLASILGSDFFKRRIIRSETDYIVYEnmHNGTAGLDIAFYENRNIYHTAKDDLSHVMPKSLRH 308
                    *************9..88889999**********************************976788*******************************9 PP

                    HH CS
  Peptidase_M28 190 ia 191
                    + 
     EPX73515.1 309 MM 310
                    86 PP

>> Peptidase_M20  Peptidase family M20/M25/M40
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.0   2.7e-08   0.00012       3      97 ..     145     216 ..     143     429 .. 0.84

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 2.7e-08
                    EEES-BSSTTCGGGSSSTTSEEETTTEEESTTTTTTHHHHHHHHHHHHHHHHHTTT-SSEEEEEEESTTSSTTTHHHHHHHHHHTTTCESEEEEE CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_M20   3 gsHlDvVpeeetdgwttpfslteedGklyGrGaddmkggvlaalealralkdegikpkgtivllfqpdEEggrgGakallegleerekvdavfel 97 
                     +H+D+V                      G G++d+  gv+a le++r +++++  p++++ + f  +EE    Ga+a++++ +  ++v a++ l
     EPX73515.1 145 SAHYDSVS--------------------TGKGTTDDGMGVAATLELCRYYAKHQ--PERDLIVNFNNAEEDYLYGARAFAAHEL-SKNVTAFVNL 216
                    55555555....................3579*******************998..799***********666********666.4577776633 PP

>> NPCC  Nuclear pore complex component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.5   7.6e-06     0.034      51     117 ..     470     536 ..     378     548 .. 0.73
   2 ?   -0.0   0.9      0.19   8.6e+02      56      78 ..     613     652 ..     545     653 .. 0.60

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 7.6e-06
        NPCC  51 lkkksseeslasalyaelveklirllfllniviallkLlrkqdkiaDlpLtekQrellGLkadesse 117
                 +   s+  sl  +l +++  +l +l  ++ +++ l+++    d+++D++ t++ r llG+ ++++s+
  EPX73515.1 470 VFFISVVLSLHYELSSTYWVTLSYLSTVCCCILTLIRIHYFVDNVEDMNFTREERSLLGVPSSNQSQ 536
                 44445577777888888888888999999999999999999********************995443 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.19
        NPCC  56 s.................eeslasalyaelveklirllfl 78 
                                   ++++++ l++ +++ l++ lfl
  EPX73515.1 613 IiaffsmvnsgpfifralSKKSTAVLTMLWITLLVQALFL 652
                 0222222233344555558889999999999999999885 PP

>> Peptidase_M42  M42 glutamyl aminopeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.13     6e+02       2      25 ..     127     151 ..     126     154 .. 0.80
   2 ?    8.7   0.0   0.00017      0.78     133     179 ..     158     204 ..     150     219 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.13
                    -EEEEEESSTTSS.EEEEEEE--B- CS
  Peptidase_M42   2 nliakkkgkekep.kvmiaAHmDei 25 
                    n++++ +gk+ +   ++++AH D +
     EPX73515.1 127 NILIHFQGKNRQRlPILLSAHYDSV 151
                    899999995554449********98 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00017
                    HHHHHHHHHHHHHHHHHCTSS-SSEEEEEEESTCTTTSHHHHHHHHH CS
  Peptidase_M42 133 lDdragvavllellkelkeeeleatvylvatvqEEvGlrGaktsaek 179
                     Dd +gva+ lel + +++++ e ++++ +++ EE  l Ga+++a +
     EPX73515.1 158 TDDGMGVAATLELCRYYAKHQPERDLIVNFNNAEEDYLYGARAFAAH 204
                    69*******************99******************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (841 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       936  (0.0522059); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.70u 0.28s 00:00:00.98 Elapsed: 00:00:00.42
# Mc/sec: 6069.72
//
Query:       EPX73516.1  [L=283]
Description: ribosome biogenesis protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.8e-55  186.1   0.0    7.4e-55  185.8   0.0    1.1  1  DUF2431          Domain of unknown function (DUF2431)
     0.0042   16.8   0.0     0.0079   15.8   0.0    1.4  1  Methyltr_RsmB-F  16S rRNA methyltransferase RsmB/F
  ------ inclusion threshold ------
      0.057   13.0   0.0        0.1   12.2   0.0    1.4  1  MTS              Methyltransferase small domain


Domain annotation for each model (and alignments):
>> DUF2431  Domain of unknown function (DUF2431)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  185.8   0.0   1.2e-58   7.4e-55       1     168 []      61     226 ..      61     226 .. 0.97

  Alignments for each domain:
  == domain 1  score: 185.8 bits;  conditional E-value: 1.2e-58
     DUF2431   1 LlvGegdfSFarslveqh..kcenlvaTsydseeellekypqaeenieeLeeegvkvlfgVDatkleksklqeklkkekfdriifnFPhvggkstdvnr 97 
                 Ll+Geg+fSFa+sl ++h  +++ l+aT+yds+e+++ kyp+++e ie++ ++g +vl++VDatkl+   ++ klk+++fd i++nFPh g++++d++r
  EPX73516.1  61 LLIGEGNFSFAASLQKHHidSEAVLLATCYDSKEDVELKYPDSSEYIEQVLQNGGEVLYDVDATKLK---QNRKLKNRQFDTILWNFPHSGKGIKDQDR 156
                 8***************99998889*******************************************...457788888******************** PP

     DUF2431  98 qvranqeLlvsffksakellsekpgeilvtlfegepytlwnikdlareaglkvvrsfkFdaeaypgYkhar 168
                 ++ +nq++l +ffk++kellse+ g i++tl e +py+ wn+k la+eag+      +Fd++ yp+Y+h+r
  EPX73516.1 157 NILDNQKMLLEFFKQSKELLSEN-GVIVITLAETKPYSMWNLKGLAKEAGFISLMTEPFDSSCYPEYSHRR 226
                 ***********************.*********************************************97 PP

>> Methyltr_RsmB-F  16S rRNA methyltransferase RsmB/F
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   1.3e-06    0.0079      64     122 ..     119     177 ..     105     186 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1.3e-06
                      EES-CTCCHHH..HCC..EEEEEEEE--CCGGGTTT-TCHHHH--HHHHHHHHHHHHHHHH CS
  Methyltr_RsmB-F  64 leaDarkidkv..lggelfDriLlDaPCsgtgvirrdpdvklrrkekdiaqlaklqkells 122
                        +Da+k ++   l +++fD iL   P sg g++++d+++  + ++k + ++ k+ kells
       EPX73516.1 119 YDVDATKLKQNrkLKNRQFDTILWNFPHSGKGIKDQDRNI--LDNQKMLLEFFKQSKELLS 177
                      56777777664114559**********************9..7788889999999999997 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   1.7e-05       0.1      82     147 ..     121     194 ..      83     209 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.7e-05
                 EEEEE-STTTTSTTS-EEEEEE---STTTC...HC......HHHHHHHHHHHHHHHEEEEEEEEEEEETTSCHHH CS
         MTS  82 vevvasdvleeveekkfdlivsNPPfhagk...at......elavaeeliaeAkeaLkegGeLliVanrklgyes 147
                 v++++     ++++++fd+i+ N P   gk   ++      ++++  e+++++ke L+e+G ++i   +  +y+ 
  EPX73516.1 121 VDATKLKQNRKLKNRQFDTILWNFPHS-GKgikDQdrnildNQKMLLEFFKQSKELLSENGVIVITLAETKPYSM 194
                 555555556778899********9943.33122221111114567889*****************9999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (283 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       674  (0.0375927); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 1954.35
//
Query:       EPX73517.1  [L=507]
Description: transcription factor TFIIIB complex subunit bdp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-30  105.2   4.5    1.2e-30  105.2   4.5    2.6  1  Myb_DNA-bind_7   Myb DNA-binding like
      2e-07   31.1   0.1      2e-07   31.1   0.1    1.9  2  Myb_DNA-binding  Myb-like DNA-binding domain
  ------ inclusion threshold ------
      0.071   13.4   0.7       0.22   11.8   0.7    1.9  1  Myb_DNA-bind_6   Myb-like DNA-binding domain
       0.11   13.0   1.1        1.8    9.1   0.0    2.7  2  Vps39_2          Vacuolar sorting protein 39 domain 2
       0.28   11.7   1.6        1.7    9.2   0.2    2.6  2  HZS_alpha        Hydrazine synthase alpha subunit middle doma
        1.4    8.4   0.0        1.4    8.4   0.0    2.3  2  DUF1974          Domain of unknown function (DUF1974)


Domain annotation for each model (and alignments):
>> Myb_DNA-bind_7  Myb DNA-binding like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.2   4.5   4.2e-34   1.2e-30       2      82 ..     359     439 ..     358     447 .. 0.96

  Alignments for each domain:
  == domain 1  score: 105.2 bits;  conditional E-value: 4.2e-34
  Myb_DNA-bind_7   2 frkrkktkkWskeetekFYkaLsqfGtDFsliaklfpkrtrrqlKlKFkkEerknpeliekalkkrkeldleefkeeaeke 82 
                     + +r+k++kW+++et+kFYkaLsq+GtDF li+++fp+r+rrq+KlKFk+Ee++np++i++al+++k++d+ee+++e  k+
      EPX73517.1 359 WGNRQKSEKWKSDETDKFYKALSQWGTDFALISNMFPSRNRRQIKLKFKQEEKRNPARINEALRTKKPVDMEEYSKESGKV 439
                     889************************************************************************998876 PP

>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.3   0.5         6   1.8e+04       6      14 ..     338     346 ..     338     347 .. 0.85
   2 !   31.1   0.1   6.6e-11     2e-07       2      44 ..     366     408 ..     365     409 .. 0.96

  Alignments for each domain:
  == domain 1  score: -4.3 bits;  conditional E-value: 6
                      HHHHHHHHH CS
  Myb_DNA-binding   6 eeEdelLle 14 
                      +eEd  ++e
       EPX73517.1 338 PEEDREFVE 346
                      79**99987 PP

  == domain 2  score: 31.1 bits;  conditional E-value: 6.6e-11
                      SSSBHHHHHHHHHHHHHHTTCHHHHHHHHTSS-HHHHHHHHHH CS
  Myb_DNA-binding   2 gkWteeEdelLleavkkhGnrWkkIaerlggRtekqcrsrwrn 44 
                       kW  +E +++++a+ ++G ++++I++++++R + q+++++++
       EPX73517.1 366 EKWKSDETDKFYKALSQWGTDFALISNMFPSRNRRQIKLKFKQ 408
                      59**************************************986 PP

>> Myb_DNA-bind_6  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.7   7.4e-05      0.22       1      48 [.     368     415 ..     368     425 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 7.4e-05
  Myb_DNA-bind_6   1 WteeEdeiLlklvekygndWknIaealnrRtpkqcfdrwknkLrpkis 48 
                     W  +E+++  k  ++ g d+ +I+++++ R+  q++ ++k++ + ++ 
      EPX73517.1 368 WKSDETDKFYKALSQWGTDFALISNMFPSRNRRQIKLKFKQEEKRNPA 415
                     9999***********************88***********96555555 PP

>> Vps39_2  Vacuolar sorting protein 39 domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.0    0.0006       1.8      39      85 ..     152     198 ..     134     206 .. 0.81
   2 ?    1.2   0.3      0.17   5.1e+02      25      61 ..     449     485 ..     442     497 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.0006
     Vps39_2  39 nslekkreeqvvkklrkaeklsveeellklrskkvvvteekvCavCk 85 
                 +   +++ +++ k   + +k ++  ++++++++++ ++e k+ a+C 
  EPX73517.1 152 EDQDASQSKRMTKASIRRRKRKLIVDNVGTEQESININETKMSALCD 198
                 34566788899999999*****************************7 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.17
     Vps39_2  25 plkdlesflekalrnslekkreeqvvkklrkaeklsv 61 
                 +l++++s +e+  ++++e+++++qv+++ +  ++ ++
  EPX73517.1 449 ELAHIRSAFEEERKRAVETAEQRQVIANYEAEQERNA 485
                 5778999999999999999999999999876665554 PP

>> HZS_alpha  Hydrazine synthase alpha subunit middle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.1      0.29   8.6e+02      23      90 ..      37     104 ..      21     109 .. 0.75
   2 ?    9.2   0.2   0.00057       1.7       3      72 ..     212     292 ..     211     309 .. 0.76

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.29
   HZS_alpha  23 saagvqegasastasvdvkrilGevpveeDGSavfevpadtplllqaldengkavqtmrswltvkPge 90 
                 + + +qeg s++ ++v+ + + G ++   D   ++   a+++  +   +++g  +q  ++ ++ kP  
  EPX73517.1  37 DVEALQEGISTNLHEVNEEPVDGPQEEGRDSFNILVEAAQEAQKMGNQNDEGSDLQNNQTSVISKPTV 104
                 44567777788888888888888888888866666777888999999999999999999999999975 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00057
   HZS_alpha   3 vkklrvveaepkseretgevsaagvqeg...........asastasvdvkrilGevpveeDGSavfevpadtplllqalde 72 
                 ++k+ + e++ k++++tg+v++a+++++           + + +++ + ++++G+v+ e+ G   +evp ++  +  +ld+
  EPX73517.1 212 IEKILLEEKLAKRKKRTGSVTPAKEESPqrdvqsvnntsQMNIQEPEEEEEVVGTVEAEPEGQEEVEVPESNVASKSILDQ 292
                 556666666666677777677666666667777766664455567788999******************999999999997 PP

>> DUF1974  Domain of unknown function (DUF1974)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.0   0.00047       1.4      37      83 ..     345     393 ..     341     394 .. 0.81
   2 ?   -1.2   2.7       0.4   1.2e+03     218     274 ..     438     488 ..     403     495 .. 0.69

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00047
     DUF1974  37 vvsnalrslvlgltggrlasap..vagetkryyrqlnrlSaafAllaDl 83 
                 v +nal+  v++ t g  +++    ++et ++y++l+++ + fAl++++
  EPX73517.1 345 VEENALSRRVTSATWGNRQKSEkwKSDETDKFYKALSQWGTDFALISNM 393
                 5567777777777777666666689*********************987 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.4
     DUF1974 218 kafkavlaaeplekklkkaikkgklkklkleelleealekgviteeeaelleeaeel 274
                 k f+ v+++e+  + +++a +      ++ ++ +e+a +++vi + eae+ ++a + 
  EPX73517.1 438 KVFRPVEEVEKELAHIRSAFE------EERKRAVETAEQRQVIANYEAEQERNAPQT 488
                 445555555555555555544......446788999999999999999988877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (507 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1637  (0.0913046); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.66u 0.32s 00:00:00.98 Elapsed: 00:00:00.48
# Mc/sec: 3170.48
//
Query:       EPX73518.1  [L=690]
Description: ubiquitin-protein ligase E3 Brl1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.3e-15   55.9   7.4    3.3e-15   55.9   7.4    5.4  2  BRE1            BRE1 E3 ubiquitin ligase
    2.6e-06   27.2   7.4      5e-06   26.3   7.4    1.4  1  zf-C3HC4_3      Zinc finger, C3HC4 type (RING finger)
    7.1e-06   25.8   8.8    1.5e-05   24.7   8.8    1.6  1  zf-C3HC4_2      Zinc finger, C3HC4 type (RING finger)
    7.7e-06   25.7   6.5    1.6e-05   24.7   6.5    1.5  1  Prok-RING_4     Prokaryotic RING finger family 4
    7.9e-06   25.6   9.4    1.8e-05   24.5   9.4    1.7  1  zf-C3HC4        Zinc finger, C3HC4 type (RING finger)
    5.6e-05   23.4   8.9    5.6e-05   23.4   8.9    1.9  2  zf-RING_2       Ring finger domain
    8.3e-05   22.5   8.4    0.00022   21.1   8.5    1.7  1  zf-RING_5       zinc-RING finger domain
    0.00025   21.0   3.3    0.00025   21.0   3.3    2.1  1  zf-RING_UBOX    RING-type zinc-finger
    0.00034   20.9   5.6    0.00093   19.4   5.6    1.8  1  zf-rbx1         RING-H2 zinc finger domain
     0.0015   18.7   3.9     0.0015   18.7   3.9    1.8  2  zf-C3HC4_4      zinc finger of C3HC4-type, RING
     0.0053   16.9   0.5      0.014   15.5   0.5    1.7  1  zf-UDP          Zinc-binding RING-finger
  ------ inclusion threshold ------
      0.085   12.7   2.4       0.17   11.8   2.4    1.5  1  zf-RING_6       zf-RING of BARD1-type protein
      0.088   13.5   0.5      0.088   13.5   0.5    4.1  3  LprI            Lysozyme inhibitor LprI
       0.57   10.0   8.3        1.2    8.9   8.3    1.6  1  zf-RING_4       RING/Ubox like zinc-binding domain
        1.2    9.1   4.9        2.8    7.9   4.9    1.6  1  zf-C3HC4_5      Zinc finger, C3HC4 type (RING finger)
        1.4    8.6   5.3        2.8    7.6   5.3    1.4  1  Zn_ribbon_17    Zinc-ribbon, C4HC2 type
        2.9    8.0   6.0        6.7    6.9   6.0    1.5  1  DUF1272         Protein of unknown function (DUF1272)
        4.2    7.4   9.2       0.39   10.6   1.7    3.0  2  Pox_A_type_inc  Viral A-type inclusion protein repeat


Domain annotation for each model (and alignments):
>> BRE1  BRE1 E3 ubiquitin ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   2.4       8.6   8.6e+03      66      66 ..     290     290 ..     243     322 .. 0.55
   2 !   55.9   7.4   3.3e-18   3.3e-15       1      92 [.     444     535 ..     444     539 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 8.6
        BRE1  66 k 66 
                 +
  EPX73518.1 290 R 290
                 1 PP

  == domain 2  score: 55.9 bits;  conditional E-value: 3.3e-18
        BRE1   1 lqkELvklekafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdalenelkkLnkllsKsselieqLkelekefvrklkel 92 
                 l++EL+ ++ af+++ ++l++ +  l++ ee +++++ +k++a qkyf+am+s+d l +e k+L+  +sK +e +++L e+e+ + +  ++l
  EPX73518.1 444 LEAELPGMHLAFNKAYSKLRNNLDLLQSNEEAVKKAHYDKSRAAQKYFSAMKSRDLLITESKTLKLVNSKGQEFVNKLSERENVLAKYQSSL 535
                 689*****************************************************************************776555444333 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.3   7.4     5e-09     5e-06       4      47 ..     636     680 ..     634     683 .. 0.85

  Alignments for each domain:
  == domain 1  score: 26.3 bits;  conditional E-value: 5e-09
                 B-TTTSS.SBS-EEETTEEEEEE-HHHHHHHHH.TT-B-TTT--B- CS
  zf-C3HC4_3   4 eCviCle.rprnvvllpCgHlvlCeeCaekllk.rkkkCpiCrrpi 47 
                 +C++C   + +n ++  CgH  +C++C e+ lk +++ CpiC + +
  EPX73518.1 636 KCQMCDYsNWKNRLIPTCGHA-FCSSCIESRLKqKDRACPICETIY 680
                 8****872577788888****.*******999989*******9865 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   8.8   1.5e-08   1.5e-05       1      40 []     636     676 ..     636     676 .. 0.86

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 1.5e-08
  zf-C3HC4_2   1 kCpiC.ldmlkdpsvvtpCgHvfCqkCilrsLeekn.eCPlC 40 
                 kC+ C +   k+   +  CgH fC++Ci   L++k+  CP+C
  EPX73518.1 636 KCQMCdYSNWKN-RLIPTCGHAFCSSCIESRLKQKDrACPIC 676
                 699994455666.58889******************9***** PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   6.5   1.6e-08   1.6e-05       1      43 [.     637     683 ..     637     686 .. 0.79

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 1.6e-08
  Prok-RING_4   1 CvlCgeqekkailep.CgHlvCkeCfdsk.dls...sCPlCqrrisks 43 
                  C +C  ++ k +l+p CgH +C +C +s  + +   +CP+C++  +++
   EPX73518.1 637 CQMCDYSNWKNRLIPtCGHAFCSSCIESRlK-QkdrACPICETIYNSA 683
                  9999998877666666***********9852.3357******987665 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   9.4   1.8e-08   1.8e-05       1      41 []     637     676 ..     637     676 .. 0.88

  Alignments for each domain:
  == domain 1  score: 24.5 bits;  conditional E-value: 1.8e-08
                 -TTT.-S--SS-E.E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiC.leeakepnelleCkHsfCskCirkilksrkkvkCPlC 41 
                 C+ C  +++k+   + +C+H+fCs+Ci++ lk +k + CP+C
  EPX73518.1 637 CQMCdYSNWKNRL-IPTCGHAFCSSCIESRLK-QKDRACPIC 676
                 8888446777777.99****************.99999**** PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1       4.8   4.8e+03      14      24 ..      67      77 ..      59      79 .. 0.57
   2 !   23.4   8.9   5.6e-08   5.6e-05       2      43 ..     636     676 ..     635     677 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 4.8
   zf-RING_2 14 dsvlllpCgHv 24
                ++++l+ C+H+
  EPX73518.1 67 NHYILQVCNHH 77
                3444334*995 PP

  == domain 2  score: 23.4 bits;  conditional E-value: 5.6e-08
   zf-RING_2   2 eCpIC.leelssadsvlllpCgHvfhreClerwlrssst.CPlC 43 
                 +C  C +++++  ++++ + CgH f+ +C+e  l+++ + CP+C
  EPX73518.1 636 KCQMCdYSNWK--NRLIPT-CGHAFCSSCIESRLKQKDRaCPIC 676
                 79999667775..456655.**********9989999889**** PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   8.5   2.2e-07   0.00022       9      43 ..     642     677 ..     636     678 .. 0.83

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 2.2e-07
   zf-RING_5   9 lskeekfyltsCgHifCekClkkll.ekeavCpiCr 43 
                 +s+ ++  + +CgH fC++C+  +l +k++ CpiC+
  EPX73518.1 642 YSNWKNRLIPTCGHAFCSSCIESRLkQKDRACPICE 677
                 4556778899***************99********8 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   3.3   2.5e-07   0.00025       7      39 .]     644     674 ..     637     674 .. 0.71

  Alignments for each domain:
  == domain 1  score: 21.0 bits;  conditional E-value: 2.5e-07
  zf-RING_UBOX   7 lftdPlvlpCGHtFCreClwelskslegafkCP 39 
                    +++ l+++CGH FC++C+  +s+ +++ + CP
    EPX73518.1 644 NWKNRLIPTCGHAFCSSCI--ESRLKQKDRACP 674
                   444443336**********..799999999998 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   5.6   9.3e-07   0.00093      13      55 .]     636     677 ..     629     677 .. 0.81

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 9.3e-07
     zf-rbx1  13 acieckapgdeecpvvlGeCgHaFHlhCiskWlkt.rkvCPlcr 55 
                 +c  c++++ +  +  + +CgHaF   Ci++ lk+  ++CP+c+
  EPX73518.1 636 KCQMCDYSNWK--NRLIPTCGHAFCSSCIESRLKQkDRACPICE 677
                 67777777777..566679****************6677****5 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1       9.6   9.6e+03      20      30 ..     636     646 ..     632     648 .. 0.67
   2 !   18.7   3.9   1.5e-06    0.0015      15      42 .]     652     676 ..     649     676 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 9.6
  zf-C3HC4_4  20 fClsCisslqk 30 
                  C+ C +s +k
  EPX73518.1 636 KCQMCDYSNWK 646
                 58888777666 PP

  == domain 2  score: 18.7 bits;  conditional E-value: 1.5e-06
  zf-C3HC4_4  15 eCGhsfClsCisslqkepdgeqllCplC 42 
                  CGh fC sCi+s  k++d +   Cp C
  EPX73518.1 652 TCGHAFCSSCIESRLKQKDRA---CPIC 676
                 5**************999885...**99 PP

>> zf-UDP  Zinc-binding RING-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.5   1.4e-05     0.014      31      62 ..     651     682 ..     644     687 .. 0.92

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.4e-05
      zf-UDP  31 necafpvcrpcyeyerkdgnqsCPqCktrykr 62 
                   c+   c +c e + k+  ++CP C+t y+ 
  EPX73518.1 651 PTCGHAFCSSCIESRLKQKDRACPICETIYNS 682
                 579**************************986 PP

>> zf-RING_6  zf-RING of BARD1-type protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   2.4   0.00017      0.17       7      48 ..     634     678 ..     628     688 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00017
   zf-RING_6   7 llrcsrctdilrepvclggcehifcsncisdcf...gsgcpvcyt 48 
                 +l+c  c     +   +  c h fcs ci   +      cp+c t
  EPX73518.1 634 MLKCQMCDYSNWKNRLIPTCGHAFCSSCIESRLkqkDRACPICET 678
                 7888888888888888999**********9877222468****87 PP

>> LprI  Lysozyme inhibitor LprI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.7       4.6   4.6e+03      15      15 ..     333     333 ..     260     377 .. 0.61
   2 ?   13.5   0.5   8.8e-05     0.088       9      66 ..     435     499 ..     427     509 .. 0.78
   3 ?    1.2   0.6      0.59   5.9e+02      17      55 ..     528     578 ..     514     629 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 4.6
                 H CS
        LprI  15 C 15 
                  
  EPX73518.1 333 R 333
                 1 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 8.8e-05
                 HH.....HHHHHHHHHHHHHHHHHHHHHHH......HHHHH..TT....HHHHHHHHHHHHHHHHHHHH CS
        LprI   9 etqa...nqCasaalkaadaeLnkaykalk......eekek..kavssearkaLkdaqraWikyRdaeC 66 
                 e+ +   n+C++a+l  +  + nkay++l+      +   +  +av+++  ++ ++aq+++ + + ++ 
  EPX73518.1 435 EK-VsrnNACLEAELPGMHLAFNKAYSKLRnnldllQ---SneEAVKKAHYDKSRAAQKYFSAMKSRDL 499
                 33.3477***********************8885542...24568999999999*******99887765 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.59
                 HHHHHHHHHHHHHHHHHHH...........HHHHH.TT....HHHHHHHHH CS
        LprI  17 saalkaadaeLnkaykalk...........eekek.kavssearkaLkdaq 55 
                  a+++++ +e++ +yk++k           ee+++ + ++s+ ++++k  q
  EPX73518.1 528 LAKYQSSLKEMEIVYKQIKdifgrystgvlEEDKRlQIRNSDLEQKFKSLQ 578
                 578999999999999999988888888887555545666666666665544 PP

>> zf-RING_4  RING/Ubox like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   8.3    0.0013       1.2      19      47 ..     652     680 ..     637     681 .. 0.88

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0013
   zf-RING_4  19 eCgyqiClfCyhrileeeegrCPaCreeY 47 
                 +Cg+ +C  C +  l++++  CP C + Y
  EPX73518.1 652 TCGHAFCSSCIESRLKQKDRACPICETIY 680
                 7************************9988 PP

>> zf-C3HC4_5  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   4.9    0.0029       2.8      19      48 ..     649     676 ..     636     679 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0029
  zf-C3HC4_5  19 flinpeCYhkmCesCvdRlFsdGPnqCPva 48 
                 +   p C h  C+sC++   ++    CP+ 
  EPX73518.1 649 L--IPTCGHAFCSSCIESRLKQKDRACPIC 676
                 3..399***********999999999*985 PP

>> Zn_ribbon_17  Zinc-ribbon, C4HC2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   5.3    0.0028       2.8       6      46 ..     636     674 ..     632     678 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0028
  Zn_ribbon_17   6 sCayCelavkgrvvlcgvCeHvlHasCarewfenddlaeCp 46 
                   +C++C+ +  ++ +++  C+H   +sC+++ ++++d   Cp
    EPX73518.1 636 KCQMCDYSNWKNRLIP-TCGHAFCSSCIESRLKQKD-RACP 674
                   8*****9998887765.7******************.9998 PP

>> DUF1272  Protein of unknown function (DUF1272)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   6.0    0.0067       6.7       7      47 ..     636     676 ..     634     679 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0067
     DUF1272   7 nCecCdkdlppdseearicsyEctFCaeCaeevl...envCPnc 47 
                 +C++Cd +  ++     i +  ++FC++C e++l   +  CP c
  EPX73518.1 636 KCQMCDYSNWKNR---LIPTCGHAFCSSCIESRLkqkDRACPIC 676
                 6999998866666...9999999***********4333579999 PP

>> Pox_A_type_inc  Viral A-type inclusion protein repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   1.7   0.00039      0.39       2      18 ..     347     363 ..     346     363 .. 0.94
   2 ?   -1.1   1.0       2.1   2.1e+03       5      16 ..     562     573 ..     559     573 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00039
  Pox_A_type_inc   2 EmsrlRsRIsDLErqLs 18 
                     E+ +++ RI++LEr+L+
      EPX73518.1 347 EIKEKQARIEELERSLT 363
                     999************96 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 2.1
  Pox_A_type_inc   5 rlRsRIsDLErq 16 
                     rl+ R sDLE++
      EPX73518.1 562 RLQIRNSDLEQK 573
                     788888****96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (690 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2374  (0.132411); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                        23  (0.00128284); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.73u 0.30s 00:00:01.03 Elapsed: 00:00:00.50
# Mc/sec: 4182.66
//
Query:       EPX73519.1  [L=902]
Description: ubiquitin-protein ligase E3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.8e-28   99.2   0.6    1.8e-28   99.2   0.6    2.9  3  Pep3_Vps18    Pep3/Vps18/deep orange family
      4e-08   33.7   1.0    1.5e-07   31.8   1.0    2.1  1  Vps39_2       Vacuolar sorting protein 39 domain 2
     0.0058   16.1   0.6      0.016   14.7   0.1    1.9  2  DUF705        Protein of unknown function (DUF705)
  ------ inclusion threshold ------
      0.015   15.7   0.2         12    6.4   0.0    3.5  3  bPH_3         Bacterial PH domain
      0.041   13.9   9.4      0.045   13.7   7.3    2.1  2  zf-RING_5     zinc-RING finger domain
      0.043   13.9   1.7       0.17   11.9   1.2    2.1  2  zf-ANAPC11    Anaphase-promoting complex subunit 11 RING-H2 f
      0.046   13.9   3.6          2    8.7   0.0    4.0  4  TPR_2         Tetratricopeptide repeat
      0.048   13.7   5.9       0.15   12.1   5.9    1.9  1  zf-RING_UBOX  RING-type zinc-finger
      0.061   13.2   9.4       0.39   10.6   9.2    2.3  2  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
      0.099   12.5   8.3       0.29   11.0   8.3    1.9  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
        0.1   12.7   0.0        5.6    7.2   0.0    3.5  3  TPR_7         Tetratricopeptide repeat
       0.15   12.4   1.2         14    6.1   0.0    3.5  3  TPR_12        Tetratricopeptide repeat
        1.5    8.9   7.5        4.4    7.4   7.5    1.8  1  zf-C3H2C3     Zinc-finger
        1.8    8.9   8.0        4.5    7.6   8.0    1.7  1  zf-rbx1       RING-H2 zinc finger domain


Domain annotation for each model (and alignments):
>> Pep3_Vps18  Pep3/Vps18/deep orange family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.2   0.6   1.4e-31   1.8e-28       2     148 ..     278     416 ..     270     417 .. 0.94
   2 ?    0.7   0.1      0.31     4e+02     106     138 ..     547     579 ..     537     588 .. 0.73
   3 ?   -3.7   0.0       7.2   9.2e+03     116     131 ..     714     729 ..     713     734 .. 0.82

  Alignments for each domain:
  == domain 1  score: 99.2 bits;  conditional E-value: 1.4e-31
                 EEEEETT-------TTTT-EEEEGGGSS---------EEEEEE-SSEEEEEETTEEEEEETTT--EEEEEE--------EEEEEEETTTTEEEEEESS- CS
  Pep3_Vps18   2 iyhgelslsatsekvlseakllpypelakkaeessespksiaLTefHillLyedrvvavnrLneevvfeeslekesgekllglvaDpvkntfWlftnks 100
                 +yh+ ++   ++ ++++e ++++ p+l     + s++  ++ LT fHi+++  d++  +nr+n++ v+++++  +++e++lgl+ D+vk t+Wl+t++s
  EPX73519.1 278 VYHDLMN---ETMSMIQEYQFIESPRL-----SVSTVEMNLLLTPFHIVVFDLDTIFFINRINQKEVYQQKVPLSPHEEILGLSCDHVKDTYWLYTTES 368
                 4455443...46899************.....899999**********************************999999********************* PP

                 EEEEEEESHHHHHHHHH-XXXXXXXXXXXX.XXXXXXXXXXXXXXXXX CS
  Pep3_Vps18 101 ifelvvrdEdrdvWklylekgkFdeAlklaknpaqrdqVltaqadalf 148
                 ++elvv++E  dv  ++l+k+++ +Al++a++p  r++Vl  +ad+l+
  EPX73519.1 369 LHELVVNNELGDVALVFLQKQEYIKALECANTPNVRNSVLDGYADHLM 416
                 **********************************************98 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.31
                 EESHHHHHHHHH-XXXXXXXXXXXX.XXXXXXX CS
  Pep3_Vps18 106 vrdEdrdvWklylekgkFdeAlklaknpaqrdq 138
                 v +++  + +  ++++++d+Al+  ++ + +++
  EPX73519.1 547 VMKDQSYIMHYWVQRENYDKALETLNEGVDQES 579
                 55666677788899*********9996655544 PP

  == domain 3  score: -3.7 bits;  conditional E-value: 7.2
                 HH-XXXXXXXXXXXX. CS
  Pep3_Vps18 116 lylekgkFdeAlklak 131
                 l le+++++ A+++a+
  EPX73519.1 714 LALEEKDYELAASVAN 729
                 67999******99987 PP

>> Vps39_2  Vacuolar sorting protein 39 domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.8   1.0   1.2e-10   1.5e-07       2     107 ..     761     865 ..     760     867 .. 0.85

  Alignments for each domain:
  == domain 1  score: 31.8 bits;  conditional E-value: 1.2e-10
     Vps39_2   2 elLskhaerldplevLdllPdelplkdlesflekalrnslekkreeqvvkklrkaeklsveeellklrskkvvvteekvCavCkkrlgesvfvvyPngs 100
                 ++L+k ++ l+ +e ++llP+e++l dl++ ++  l++  e+  +  ++ +      + v+ +   l+++ vv+++++ C  C+  l ++ fv +P ++
  EPX73519.1 761 KFLEK-SNVLPLTELIRLLPEEISLDDLRDNICDELESCREQIGQLGLQIEQATEVAEAVRTKSDDLKNRYVVLNHNEPCWHCHHLLFSEPFVLFPCQH 858
                 66776.699***************************777777666555555555555667777778999****************************** PP

     Vps39_2 101 vvHlgCa 107
                   H +C+
  EPX73519.1 859 AFHRQCM 865
                 ******8 PP

>> DUF705  Protein of unknown function (DUF705)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       4.9   6.2e+03     224     243 ..     165     184 ..     159     189 .. 0.81
   2 !   14.7   0.1   1.3e-05     0.016     102     146 ..     285     327 ..     272     348 .. 0.79

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 4.9
      DUF705 224 ivlditnskrlPksvkvvlk 243
                 ++ld+ ++krl ks + v +
  EPX73519.1 165 LMLDTAHVKRLEKSMNTVYS 184
                 67899999999999999876 PP

  == domain 2  score: 14.7 bits;  conditional E-value: 1.3e-05
      DUF705 102 dvykleslkeWlvleiskvssiikelslylkikhvvvfDlDstLi 146
                 +++++  ++e+  +e + +s    e++l l + h+vvfDlD    
  EPX73519.1 285 ETMSM--IQEYQFIESPRLSVSTVEMNLLLTPFHIVVFDLDTIFF 327
                 45555..9******999999999******************8753 PP

>> bPH_3  Bacterial PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0    0.0092        12       6      40 ..     190     223 ..     182     232 .. 0.71
   2 ?    5.0   0.0     0.024        31      14      50 ..     261     295 ..     245     336 .. 0.69
   3 ?   -1.8   0.0       3.3   4.2e+03      65      94 ..     747     776 ..     734     776 .. 0.74

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0092
       bPH_3   6 kilyltkgqinakldkpglivvTnkRiifldpkmf 40 
                  +l ++ ++ + +  k  l+v+Tn+Ri+ +++++ 
  EPX73519.1 190 VPLDMLLSSQE-DSLKENLVVATNQRILKFTKGNN 223
                 55555544433.3788899*********9999865 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.024
       bPH_3  14 qinakldkpglivvTnkRiifldpkmfggkdfeeipY 50 
                 q+    + + +++ TnkRi++ d  + + + ++e+++
  EPX73519.1 261 QTS--AEPYTIAIKTNKRIVYHDLMNETMSMIQEYQF 295
                 333..444556666*******9987666555555554 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 3.3
       bPH_3  65 akitletsgktitidnidksevrkiveair 94 
                 + i   t++ + +i+ ++ks+v  ++e+ir
  EPX73519.1 747 KAIFSSTENVKESIKFLEKSNVLPLTELIR 776
                 445555688888899999999999999997 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       2.3   2.9e+03      10      23 ..     344     357 ..     338     357 .. 0.81
   2 ?   13.7   7.3   3.5e-05     0.045       2      43 ..     839     886 ..     838     887 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 2.3
   zf-RING_5  10 skeekfyltsCgHi 23 
                 s++e++  +sC H+
  EPX73519.1 344 SPHEEILGLSCDHV 357
                 677888999****7 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 3.5e-05
   zf-RING_5   2 CnkCfeklskeekfyltsCgHifCekClkkll.......ekeavCpiCr 43 
                 C +C+  l  +e+f+l +C+H f+ +C+ k            ++C +C+
  EPX73519.1 839 CWHCHHLL-FSEPFVLFPCQHAFHRQCMLKHRlsnvsekDIAKECQLCG 886
                 899**999.9*******************99999999998899999995 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0         2   2.6e+03      19      73 ..     624     679 ..     607     685 .. 0.75
   2 ?   11.9   1.2   0.00013      0.17      30      78 ..     834     886 ..     809     892 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 2
                 SSSSB-TTT-SBTTS--TTCSTTTTTS-E.EEBTTS-EEEHHHHHHHHHHHSTSSB CS
  zf-ANAPC11  19 asddvcGicrvsfdGtcpsckfpGddcpl.vlGkckhnfhlhcilkwletetskgl 73 
                 + +++  i  ++f      c+ p  + +l  +  c+ +  +  +++++e++  + l
  EPX73519.1 624 SVEENAAIRYLKFVTGVLGCEEPSIHNTLfCIYACHSSSNESYLMNYIEQQGEHPL 679
                 45677777777787777888888866665146679999999999999999877655 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 0.00013
                 BTTS--TTCSTTTTTS-EEEBTTS-EEEHHHHHHH....HHHHSTSSB-TTTS CS
  zf-ANAPC11  30 sfdGtcpsckfpGddcplvlGkckhnfhlhcilkw....letetskglcpmcr 78 
                 +++  c +c+      p+vl  c+h+fh  c+lk     ++++   + c +c 
  EPX73519.1 834 NHNEPCWHCHHLLFSEPFVLFPCQHAFHRQCMLKHrlsnVSEKDIAKECQLCG 886
                 6778899999999999****************986211123333345666665 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.46   5.9e+02       8      24 ..     382     398 ..     377     400 .. 0.86
   2 ?    8.7   0.0    0.0016         2       6      29 ..     410     433 ..     406     436 .. 0.86
   3 ?   -3.1   0.1       9.4   1.2e+04       3      14 ..     527     538 ..     526     541 .. 0.74
   4 ?    1.7   0.0      0.28   3.6e+02      13      27 ..     560     574 ..     557     578 .. 0.81

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.46
       TPR_2   8 GlayyklgdyeeAleaf 24 
                 +l+ +++++y +Ale+ 
  EPX73519.1 382 ALVFLQKQEYIKALECA 398
                 788999*********96 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0016
       TPR_2   6 nlGlayyklgdyeeAleafekAle 29 
                   ++ ++k gdye+A+ +f + l+
  EPX73519.1 410 GYADHLMKIGDYEKAATFFAETLK 433
                 678999*************99776 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 9.4
       TPR_2   3 alynlGlayykl 14 
                 + ynl++ y k 
  EPX73519.1 527 LAYNLANNYGKE 538
                 579999999665 PP

  == domain 4  score: 1.7 bits;  conditional E-value: 0.28
       TPR_2  13 klgdyeeAleafekA 27 
                 ++ +y++Ale +++ 
  EPX73519.1 560 QRENYDKALETLNEG 574
                 6789*****998875 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   5.9   0.00012      0.15       4      26 ..     842     867 ..     839     882 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00012
  zf-RING_UBOX   4 Cle.lftdPlvl.pCGHtFCreCl.w 26 
                   C   lf++P vl pC+H F+r+C  +
    EPX73519.1 842 CHHlLFSEPFVLfPCQHAFHRQCMlK 867
                   6643788**4466**********942 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   2.2       2.8   3.5e+03      16      23 ..     837     844 ..     824     846 .. 0.76
   2 ?   10.6   9.2    0.0003      0.39       8      30 ..     846     868 ..     838     875 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 2.8
  zf-C3HC4_2  16 tpCgHvfC 23 
                  pC+H ++
  EPX73519.1 837 EPCWHCHH 844
                 49***987 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.0003
  zf-C3HC4_2   8 mlkdpsvvtpCgHvfCqkCilrs 30 
                  +++p v++pC+H f+++C+l+ 
  EPX73519.1 846 LFSEPFVLFPCQHAFHRQCMLKH 868
                 5799****************993 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   8.3   0.00023      0.29       9      41 .]     848     885 ..     836     885 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00023
                 SS-E.E-TTS--B-CHHHHHHHHC.....TSSB--TTT CS
    zf-C3HC4   9 kepnelleCkHsfCskCirkilks.....rkkvkCPlC 41 
                 +ep  l +C+H+f+++C++k++ s     + +++C lC
  EPX73519.1 848 SEPFVLFPCQHAFHRQCMLKHRLSnvsekDIAKECQLC 885
                 5666799***************9999876666669999 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.0    0.0044       5.6       9      28 ..     415     432 ..     411     440 .. 0.78
   2 ?    0.3   0.0      0.73   9.3e+02       9      22 ..     558     571 ..     556     581 .. 0.83
   3 ?   -2.1   0.0       4.3   5.5e+03       8      24 ..     749     765 ..     748     774 .. 0.87

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0044
       TPR_7   9 ysrlGdyeeAielyeqsLal 28 
                   + Gdye+A++++ +   l
  EPX73519.1 415 LMKIGDYEKAATFFAE--TL 432
                 5789**********99..54 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.73
       TPR_7   9 ysrlGdyeeAiely 22 
                 ++++ +y++A+e +
  EPX73519.1 558 WVQRENYDKALETL 571
                 78899*****9976 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 4.3
       TPR_7   8 lysrlGdyeeAielyeq 24 
                 ++s+  + +e i+++e+
  EPX73519.1 749 IFSSTENVKESIKFLEK 765
                 68899999*******99 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.0      0.82   1.1e+03       9      26 ..     381     398 ..     375     400 .. 0.80
   2 ?    6.1   0.0     0.011        14       8      35 ..     410     437 ..     404     440 .. 0.72
   3 ?    1.9   0.1      0.21   2.7e+02      57      70 ..     560     573 ..     526     578 .. 0.74

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.82
      TPR_12   9 laavlrrlgrydeAlell 26 
                 +a+v ++ ++y +Ale+ 
  EPX73519.1 381 VALVFLQKQEYIKALECA 398
                 688899999999999886 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.011
      TPR_12   8 nlaavlrrlgrydeAlellekaleiarr 35 
                  +a+ l++ g+y++A +++ + l  +++
  EPX73519.1 410 GYADHLMKIGDYEKAATFFAETLKSVEE 437
                 5778888888888888888888776655 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.21
      TPR_12  57 algryeeAlellee 70 
                 ++++y++Ale l+e
  EPX73519.1 560 QRENYDKALETLNE 573
                 66677777777766 PP

>> zf-C3H2C3  Zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   7.5    0.0034       4.4       8      25 ..     847     864 ..     839     868 .. 0.77

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0034
   zf-C3H2C3   8 LdypfvaysCkHlvHakC 25 
                    pfv + C+H +H++C
  EPX73519.1 847 FSEPFVLFPCQHAFHRQC 864
                 367*************** PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   8.0    0.0035       4.5      11      43 ..     836     867 ..     832     886 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0035
     zf-rbx1  11 eeacieckapgdeecpvvlGeCgHaFHlhCisk 43 
                 +e+c +c++   +  p vl  C+HaFH +C+ k
  EPX73519.1 836 NEPCWHCHHLLFS-EPFVLFPCQHAFHRQCMLK 867
                 6788888888877.688888**********976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (902 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       776  (0.0432818); expected 358.6 (0.02)
Passed bias filter:                      452  (0.0252106); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.70u 0.32s 00:00:01.02 Elapsed: 00:00:00.49
# Mc/sec: 5561.93
//
Query:       EPX73520.1  [L=246]
Description: rhomboid family protease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.4e-19   68.7  10.4    5.4e-19   68.7  10.4    1.6  2  Rhomboid         Rhomboid family
     0.0025   17.4  14.2      0.037   13.6  12.3    2.2  2  ABC2_membrane_5  ABC-2 family transporter protein


Domain annotation for each model (and alignments):
>> Rhomboid  Rhomboid family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.2      0.27   2.4e+03      92     123 ..       7      38 ..       1      45 [. 0.59
   2 !   68.7  10.4   6.1e-23   5.4e-19       6     145 ..      55     192 ..      50     196 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.27
                 CCCCGS----HC...CCCCCCCCCCHHHCTSS CS
    Rhomboid  92 rnrkllrkliiallllllfillnlvlgllpra 123
                 ++ k +++ ++ ++  +++i+l + l+ ++++
  EPX73520.1   7 ESIKDFFQTLPLWTKTVTWIALFIQLMSFTGF 38 
                 55555666666677777777776655555554 PP

  == domain 2  score: 68.7 bits;  conditional E-value: 6.1e-23
                 -TTHHHHGGG--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.....HHHHHHHHHHHHH-S...-EESSHHHHHHHHHHHHHHHHCCCCGS-- CS
    Rhomboid   6 elwrlltsmflHagwlHllfNmlallvfGsplerrlGslrflllyll.....sglagsllsllfsaesesplvGaSGaifgllgallvlvprnrkllrk 99 
                  +++++t++flH+++lH++fN+++ll +++++e+++G++ +++++++      +l++ +++ ++  + +  ++G+SG+ f+++ a++v+ p+ + +   
  EPX73520.1  55 LFFEVYTYVFLHVSLLHIIFNFASLLPLMAKFEKEHGTFACIFITMVpytlfPALVHLVAYRFMFLKESISIAGFSGWAFAFISATCVHNPEGPFQNY- 152
                 567899*****************************************76666555566666555555566*******************999887544. PP

                 --HC...CCCCCCCCCCHHHCTSSSTTTHHHHHHHHHHHHHHHHHH CS
    Rhomboid 100 liiallllllfillnlvlgllpraggvsnlAHlgGllaGlllglll 145
                  i +   ++++i+l ++++++p a   s+++H +G++aG+++ +++
  EPX73520.1 153 -IQK--KYIPLIYLLITTIFVPYA---SFIGHASGAAAGYATPYIF 192
                 .555..7899************98...**************99987 PP

>> ABC2_membrane_5  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6  12.3   4.2e-06     0.037      88     186 ..      32     138 ..       9     143 .. 0.75
   2 !    3.7   0.0    0.0044        39       8      49 ..     152     194 ..     150     220 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 4.2e-06
  ABC2_membrane_5  88 ililiailitlllliiavlikgnvtisevllsiliglvialif.laivlPlyfkfgvekgrivliiiifgiifllvaifslskl.......els 173
                      ++++ ++  ++l+l  ++++++ ++++   +++l + ++ +if +a +lPl+ kf+ e+g+++ i+i ++   l++a+++l  +       ++s
       EPX73520.1  32 LMSFTGFPTSYLALSWKNVFHKFLFFEVYTYVFLHVSLLHIIFnFASLLPLMAKFEKEHGTFACIFITMVPYTLFPALVHLVAYrfmflkeSIS 125
                      4555566667777788999999988877777777777777777678899*********************999*****9996663333344555 PP

  ABC2_membrane_5 174 lidlsnyilliil 186
                      + ++s +++++i+
       EPX73520.1 126 IAGFSGWAFAFIS 138
                      5555555544444 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.0044
  ABC2_membrane_5   8 ylikk.likillivllllaiiiliflndsvllifsilslvisi 49 
                      y++kk +  i+l+++++++ + ++++  s++  +++ + ++  
       EPX73520.1 152 YIQKKyIPLIYLLITTIFVPYASFIGHASGAAAGYATPYIFEH 194
                      6677744467777778888888888777777777777776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       636  (0.0354733); expected 358.6 (0.02)
Passed bias filter:                      293  (0.0163422); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1781.22
//
Query:       EPX73521.1  [L=192]
Description: ran GTPase binding protein Mog1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.9e-34  117.7   0.2    7.7e-34  117.0   0.1    1.4  2  Mog1      Ran-interacting Mog1 protein


Domain annotation for each model (and alignments):
>> Mog1  Ran-interacting Mog1 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.0   0.1   4.3e-38   7.7e-34       2     138 .]       3     145 ..       2     145 .. 0.81
   2 ?   -3.0   0.0      0.48   8.5e+03      10      20 ..     150     160 ..     149     162 .. 0.85

  Alignments for each domain:
  == domain 1  score: 117.0 bits;  conditional E-value: 4.3e-38
                 E-TTTSSEEE--TT-EEGGGTS---TTEEEEEETTTTE.EEEEE--B--TT--THHHHHHHHHHHTTTSS--........--EEEEEEE--........ CS
        Mog1   2 eLyGGaitvelPkgflDvSklRqvPDnQEVfvdkssde.siIvellerveeksdeealklhledlaeendase.......eseveevekle........ 84 
                 +L+GGa+++elP++fl++S lRq+PDnQEVf+++s+++ ++I+elle+ve+ +d++++k+h++++a +ndas+       +        l+        
  EPX73521.1   3 QLFGGAFRAELPENFLNASALRQIPDNQEVFLQDSKENlTLILELLEAVEKPHDATVAKFHFDSIAFDNDASDsviwkdeN--------LNktdisgfh 93 
                 8******************************99666554********************************9766654321........3333344443 PP

                 SS----SEEEEEEEE-B---TTS--..--B-EEEEEEEEETTTTEEEEEEEEE- CS
        Mog1  85 akkeeetsailligtqkvakfnkeeekeetvaillaliRlkevetDvlitvnvP 138
                 ++ ++ t+a+ ++     +k +k ++ +++va+l+ +i l++ etD++++vn+P
  EPX73521.1  94 NELANGTRAFGCQRIL--EKGKKVTDPASNVAVLVHVITLQDIETDIVCSVNIP 145
                 5555555555555544..66667777799***********************99 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 0.48
                 EE--TT-EEGG CS
        Mog1  10 velPkgflDvS 20 
                  ++Pk+++DvS
  EPX73521.1 150 LSFPKTLADVS 160
                 579*******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       429  (0.0239277); expected 358.6 (0.02)
Passed bias filter:                      347  (0.0193541); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1419.88
//
Query:       EPX73522.1  [L=1953]
Description: 1,3-beta-glucan synthase subunit Bgs4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
          0 1336.9   0.0          0 1336.3   0.0    1.3  1  Glucan_synthase  1,3-beta-glucan synthase component
    1.8e-36  125.4   0.5      5e-36  123.9   0.5    1.8  1  FKS1_dom1        1,3-beta-glucan synthase subunit FKS1, domai
  ------ inclusion threshold ------
       0.21   11.3   0.0       0.35   10.5   0.0    1.3  1  DUF1390          Protein of unknown function (DUF1390)


Domain annotation for each model (and alignments):
>> Glucan_synthase  1,3-beta-glucan synthase component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ! 1336.3   0.0         0         0       1     818 [.     863    1697 ..     863    1698 .. 0.98

  Alignments for each domain:
  == domain 1  score: 1336.3 bits;  conditional E-value: 0
  Glucan_synthase    1 ffpknseaerRisfFaqslstplpealkvekmptFtvLiPhysEkillslkeiikeeekksrvtlleYLkqlypkeWknFvkdtkllaeeke 92  
                       ffp+nseaerR+sfFaqs++tp+pe+++v++mptF+v+iPhy+Ekillsl+eii+ee++ srvtlleYLkql+p eW++Fvkdtk+l ee++
       EPX73522.1  863 FFPANSEAERRLSFFAQSMATPVPEPVPVDNMPTFSVFIPHYAEKILLSLREIIREEDQLSRVTLLEYLKQLHPVEWDCFVKDTKILVEENA 954 
                       79****************************************************************************************** PP

  Glucan_synthase   93 eekeeeekkeeellkekiedlpfyliGfkssepeytlrtriWaslrsqtLyrtvsGfmnYskalkllyrvenaslvellseesekleeelee 184 
                         ++++ +++e+++++ki+dlpfy+iGfks+ peytlrtriWaslrsqtLyrt+sGfmnYs+a+kllyrven+++v++++ ++++le+el++
       EPX73522.1  955 PYEDDSVSEKESVIRSKIDDLPFYCIGFKSAVPEYTLRTRIWASLRSQTLYRTISGFMNYSRAIKLLYRVENPEIVQMFGGNTDRLEHELDR 1046
                       ******************************************************************************************** PP

  Glucan_synthase  185 laerKfklvvamqryakfkkeekenaelllkaypelkiayldeeaee.eeeekeyysvLidgsseideengkrkekyrirLsGnpilGdGKs 275 
                       +a+rKfk+vv+mqryakf+kee enae+ll+ayp+l+iaylde+++  e +e++++++Lidg+sei+ en++r++kyrirLsGnpilGdGKs
       EPX73522.1 1047 MARRKFKIVVSMQRYAKFSKEEYENAEFLLRAYPDLQIAYLDEDPPLeEGGEPQLFAALIDGHSEIM-ENERRRPKYRIRLSGNPILGDGKS 1137
                       *******************************************66544999**************99.9*********************** PP

  Glucan_synthase  276 dnqnhaiiftRGeyiqviDanqdnyleEclKirsvLaefeeleleskkpyaeeiekeeekepvailGaREyiFsenigvLgdiaagkEqtFg 367 
                       dnqn+a+ f+RGey+q+iDanqdnyleEclKirsvL+efee+e+++ +py+e++ ke++ +pvailGaREyiFsenig+Lgd+aagkEqtFg
       EPX73522.1 1138 DNQNMALPFYRGEYLQLIDANQDNYLEECLKIRSVLSEFEEMETDNVNPYSETA-KERNYNPVAILGAREYIFSENIGILGDVAAGKEQTFG 1228
                       **************************************************9876.78999******************************** PP

  Glucan_synthase  368 tlfaRtlaeiggklHYGHPDflnaifmttRGGvsKaqkglhlnEDiyaGmnallRgGrikHseYiqcGKGRDlGfgsilnFttKigaGmgEq 459 
                       tlf+Rtla+iggklHYGHPDfln++fmttRGGvsKaqkglh+nEDiyaGm+allRgGrikH+eY+qcGKGRDlGfgsilnF+tK+g+GmgEq
       EPX73522.1 1229 TLFSRTLAQIGGKLHYGHPDFLNGVFMTTRGGVSKAQKGLHVNEDIYAGMTALLRGGRIKHCEYFQCGKGRDLGFGSILNFNTKVGTGMGEQ 1320
                       ******************************************************************************************** PP

  Glucan_synthase  460 lLsReyyylgtqlpldRfLsfyyahvGfhlnnllivlsvqlflllllnlgalekesiiceydkskkit..dlekplgCynlkpvlewvkivv 549 
                       +LsReyyylgtqlpldRfLsfy+ah+Gfhlnn++i+lsvqlf+++llnlga+ + +++c ydks+k +  ++ +p+gCy+l pvl+w+k++v
       EPX73522.1 1321 MLSREYYYLGTQLPLDRFLSFYFAHPGFHLNNMFIMLSVQLFMVVLLNLGAFYHVVTVCYYDKSQKLSysTTFVPQGCYQLAPVLSWLKRCV 1412
                       **************************************************************999875225678****************** PP

  Glucan_synthase  550 lsifivffisflPllvqellergvlkavsrllkhllslsplfevfvcqiyaksllkdllfGgAkYiatGRgfavtrisfaelysrfasssiy 641 
                       +sifivf+isf+Pl+v+el+ergv++a++r++kh+ s+splfevf+cq+  ++++ dl+fGgA+Yi+tGRgfa+ r++f++lysrfa+ siy
       EPX73522.1 1413 ISIFIVFWISFIPLTVHELIERGVWRAFKRFMKHIGSFSPLFEVFTCQVNCQAVVADLSFGGARYIGTGRGFATVRLPFSVLYSRFAQPSIY 1504
                       ******************************************************************************************** PP

  Glucan_synthase  642 kgiellllllfatvtvwqaallyfwitvvslilaPflfnPhqfslldffvDyrdflrWlsrgnskskeesWisyvrqsrlritglkkkvlge 733 
                        g+++l++llf t++vw a+l+y+w++++sl++aPflfnPhqf+++dffvDyr+f+rWlsrgns+++++sWi y+r sr+ritg+k+kvlg+
       EPX73522.1 1505 AGARFLMMLLFGTLSVWVAHLVYWWVSIMSLCVAPFLFNPHQFDWNDFFVDYREFIRWLSRGNSRTHANSWIGYCRLSRTRITGYKRKVLGQ 1596
                       ******************************************************************************************** PP

  Glucan_synthase  734 esekeskdvkrasllnlllseiilellvvlllliaylfinsqtgv................keaeatnsvlrlaivsllpillnvvvllvlf 809 
                       +s+k s+d+ ra+++++++se++++ l+++ ++i+y+f+ns  g                 + ++ tn++lrlaiv+l+pi++++ ++ ++ 
       EPX73522.1 1597 PSDKISMDTPRAKMTSVFFSEVLVPGLLAAGAVIPYFFMNSMPGNpsyanwldhdkmyyttDPKTGTNPILRLAIVTLVPIAVSFGMVGFFG 1688
                       ********************************************999********99998778889************************** PP

  Glucan_synthase  810 alslllgpl 818 
                        +++++gpl
       EPX73522.1 1689 GMACCMGPL 1697
                       *****9986 PP

>> FKS1_dom1  1,3-beta-glucan synthase subunit FKS1, domain-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.9   0.5   8.4e-40     5e-36       2     128 ..     356     463 ..     355     464 .. 0.96

  Alignments for each domain:
  == domain 1  score: 123.9 bits;  conditional E-value: 8.4e-40
   FKS1_dom1   2 kvlqiaLylliWGEaanvRflpeclcyifkcaadyleseeakeeeeelkeleeileekvseaaaseeeesfLkkvitPlyevlrkqeaeknkegkyvrr 100
                 +++q+aL+ll+WGEa+nvRf+pe+++++fkca+dy  s ea++ +e +                  ee  +L++vi+Ply+++++q++e+  +gkyvrr
  EPX73522.1 356 RAQQVALWLLLWGEANNVRFMPEVMAFLFKCAYDYIASPEAQNVTEPV------------------EEGYYLDNVISPLYQYMHDQQFEI-IDGKYVRR 435
                 6789**********************************9999998888..................89**********************.99****** PP

   FKS1_dom1 101 ekdHskiigYDDlNelFWskegieklkl 128
                 e+ H+++igYDD+N+lFW  egi++l +
  EPX73522.1 436 ERTHEQVIGYDDINQLFWHAEGIARLIF 463
                 ***********************99975 PP

>> DUF1390  Protein of unknown function (DUF1390)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   5.9e-05      0.35      75     168 ..     979    1073 ..     942    1088 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 5.9e-05
     DUF1390   75 nitinltvPdgdlrtviykalkspqlqrelngefqpekiPallfrhtkgkgiikpdpek..aitvedDkvhekdvggklkktplnkyakkfindat 168 
                   i +   vP+ +lrt i+  l+s++l r++ g ++  +   ll+r   + +i++  +     +++e D++  ++++  +      k+ k+  ++a 
  EPX73522.1  979 CIGFKSAVPEYTLRTRIWASLRSQTLYRTISGFMNYSRAIKLLYR-VENPEIVQMFGGNtdRLEHELDRMARRKFKIVVSMQRYAKFSKEEYENAE 1073
                  5778899*************************9887777666665.55657777644433688999999999999887766666666666555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1953 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       843  (0.0470188); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.03u 0.32s 00:00:01.35 Elapsed: 00:00:00.46
# Mc/sec: 12668.88
//
Query:       EPX73523.1  [L=145]
Description: hypothetical protein SOCG_04956 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
       0.44   10.8   7.5       0.15   12.3   3.9    2.0  3  zf-LITAF-like  LITAF-like zinc ribbon domain


Domain annotation for each model (and alignments):
>> zf-LITAF-like  LITAF-like zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0      0.28   5.1e+03      35      38 ..      16      19 ..       4      40 .. 0.52
   2 ?   12.3   3.9   8.5e-06      0.15      29      64 ..      54      88 ..      41      92 .. 0.70
   3 ?   -2.2   0.0      0.28   5.1e+03      24      35 ..     102     114 ..      95     119 .. 0.57

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.28
  zf-LITAF-like 35 clfg 38
                   ++f 
     EPX73523.1 16 FFFY 19
                   2222 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 8.5e-06
  zf-LITAF-like 29 llalllclfgc.llccliPfcvdslkdvehyCpnCga 64
                   l++  ++   + +l+c++  +vd+ +d++ +C +C +
     EPX73523.1 54 LISSGFFS--FlFLFCFVLAFVDKRRDATRFCRSCVS 88
                   22222222..234679999****************65 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 0.28
  zf-LITAF-like  24 gkltwlla.lllc 35 
                    g++t++++  + c
     EPX73523.1 102 GTTTITIFsSIWC 114
                    5566655544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       846  (0.0471861); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.28s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1027.34
//
Query:       EPX73524.1  [L=1095]
Description: karyopherin Sal3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.4e-31  108.7   5.1    1.6e-30  105.2   0.9    4.2  4  Importin_rep_4  Importin repeat
    2.4e-21   75.8  22.9    4.6e-09   36.6   0.3    9.7 11  HEAT_EZ         HEAT-like repeat
    1.8e-18   65.0  12.7     0.0021   18.2   0.0   11.6 10  HEAT            HEAT repeat
    4.9e-16   58.9  17.7    3.1e-05   24.3   0.1    7.8  7  HEAT_2          HEAT repeats
      2e-10   41.1   1.8     0.0038   17.8   0.0    6.0  6  Vac14_Fab1_bd   Vacuolar 14 Fab1-binding region
    1.6e-09   37.8   0.1    1.6e-09   37.8   0.1    3.0  2  Importin_rep_6  Importin repeat 6
    8.4e-09   35.6   0.0    2.5e-08   34.1   0.0    1.9  1  Importin_rep_5  Importin repeat
    2.9e-08   33.9   0.0     0.0016   18.5   0.0    4.3  4  Cnd1            non-SMC mitotic condensation complex subunit 
    1.7e-07   31.3   0.9        1.6    8.6   0.0    6.2  7  DUF3385         Domain of unknown function (DUF3385)
    7.5e-05   22.9   0.9       0.36   11.0   0.1    4.5  5  RTP1_C1         Required for nuclear transport of RNA pol II 
    9.5e-05   21.7   2.5       0.15   11.2   0.1    4.2  4  MMS19_C         RNAPII transcription regulator C-terminal
    0.00056   19.7   1.7        3.3    7.4   0.0    5.6  6  DUF4042         Domain of unknown function (DUF4042)
     0.0051   16.8   4.4        7.6    6.7   0.1    6.1  5  Arm             Armadillo/beta-catenin-like repeat
     0.0093   16.0   0.8       0.94    9.5   0.0    4.2  5  Xpo1            Exportin 1-like protein
  ------ inclusion threshold ------
      0.063   12.6   2.3        1.8    7.8   0.0    3.2  4  V-ATPase_H_N    V-ATPase subunit H
       0.07   12.8   0.1       0.29   10.8   0.1    2.1  2  DNA_alkylation  DNA alkylation repair enzyme
      0.078   13.1   0.0       0.94    9.6   0.0    2.8  3  ParcG           Parkin co-regulated protein
       0.12   12.1   0.0       0.33   10.7   0.0    1.8  1  DUF445          Protein of unknown function (DUF445)


Domain annotation for each model (and alignments):
>> Importin_rep_4  Importin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.2   0.9   1.6e-33   1.6e-30       1      90 []     273     370 ..     273     370 .. 0.95
   2 ?    1.0   0.0      0.53   5.3e+02       8      42 ..     387     421 ..     382     433 .. 0.89
   3 ?   -2.8   0.0       7.8   7.8e+03       7      26 ..     469     488 ..     466     510 .. 0.69
   4 ?   -0.0   0.0       1.1   1.1e+03      15      47 ..     516     548 ..     504     554 .. 0.74

  Alignments for each domain:
  == domain 1  score: 105.2 bits;  conditional E-value: 1.6e-33
  Importin_rep_4   1 nkdledaaRqsalEllvtlaenaPkmvrkeaefteklvvqvLslmtev........eddeeWatsddlddddeedeyvaaeqalDRlalkLGGka 87 
                     +kdle++aRq+alE lv+++e aP+m+r+++e+ ++lv q+L+lmt+v        e+ +eW  +ddld+d+ + +y++aeqa+DRl+ kLGGk+
      EPX73524.1 273 DKDLENSARQAALEALVCFSEGAPAMCRRSPEYANQLVLQCLMLMTDVagdeedeaENLQEWLDTDDLDQDESDANYIVAEQAMDRLSRKLGGKT 367
                     69************************************************98765555579********************************** PP

  Importin_rep_4  88 llp 90 
                     +lp
      EPX73524.1 368 ILP 370
                     997 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.53
  Importin_rep_4   8 aRqsalEllvtlaenaPkmvrkeaefteklvvqvL 42 
                      R++al  + ++ae a k++++e + + ++v  +L
      EPX73524.1 387 ERHAALMAISSIAEGAEKIMKRELSRVLDMVLPLL 421
                     69********************9998888887665 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 7.8
  Importin_rep_4   7 aaRqsalEllvtlaenaPkm 26 
                      +R  a   +v ++e a + 
      EPX73524.1 469 RVRAHAAAAMVNFSEEADNK 488
                     57888899999999998653 PP

  == domain 4  score: -0.0 bits;  conditional E-value: 1.1
  Importin_rep_4  15 llvtlaenaPkmvrkeaefteklvvqvLslmte 47 
                      ++t+a  a +  +k  ++++++++ ++s++ +
      EPX73524.1 516 AITTIATVADAAAKKFDKYFDAIMPLLISVLRQ 548
                     466777777777899999999999999887765 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       2.1   2.1e+03      23      50 ..      97     121 ..      89     126 .. 0.58
   2 !    9.6   0.1    0.0013       1.3       6      53 ..     158     201 ..     154     203 .. 0.83
   3 ?    6.5   0.1     0.012        12       3      37 ..     192     226 ..     190     231 .. 0.91
   4 ?   -2.4   0.1       7.6   7.6e+03       4      14 ..     281     295 ..     278     317 .. 0.62
   5 !   36.6   0.3   4.6e-12   4.6e-09       1      55 []     385     439 ..     385     439 .. 0.98
   6 !   11.0   0.1   0.00049      0.49      19      51 ..     445     477 ..     443     481 .. 0.89
   7 ?    6.2   0.3     0.015        15       2      37 ..     469     505 ..     469     508 .. 0.87
   8 !    7.8   0.0    0.0048       4.8       3      37 ..     512     546 ..     510     561 .. 0.92
   9 ?    0.7   0.0      0.82   8.1e+02      13      42 ..     612     641 ..     607     644 .. 0.79
  10 !   16.1   0.0   1.2e-05     0.012       1      42 [.     923     964 ..     923     969 .. 0.95
  11 ?   -0.9   0.1       2.6   2.6e+03      17      36 ..    1027    1046 ..    1017    1050 .. 0.71

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 2.1
     HEAT_EZ  23 qplvpeilpaLlalLnddsd..eVRaaAag 50 
                 q+l+ ++l +++      +   +VR + + 
  EPX73524.1  97 QTLQNQLLTCFV-----QENvpTVRNKLCD 121
                 666777777777.....2222344555554 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.0013
     HEAT_EZ   6 aAawaLGrlaggepellqplvpeilpaLlalLnddsdeVRaaAagaLg 53 
                 +++++++      p ll+++  ++ p++  +L+d+s  VR aA++a +
  EPX73524.1 158 SVYRTIA----ALPLLLSGQEAAVAPLFSTGLSDPSIGVRVAAVRAYS 201
                 5566664....34689999**************************976 PP

  == domain 3  score: 6.5 bits;  conditional E-value: 0.012
     HEAT_EZ   3 vRraAawaLGrlaggepellqplvpeilpaLlalL 37 
                 vR aA++a +++  + ++ ++++v  +lpaLl+ L
  EPX73524.1 192 VRVAAVRAYSSVVLESKQSVRDQVIPMLPALLNIL 226
                 9**********77789999*************988 PP

  == domain 4  score: -2.4 bits;  conditional E-value: 7.6
     HEAT_EZ   4 RraAawaLGr....l 14 
                 R aA+ aL +    +
  EPX73524.1 281 RQAALEALVCfsegA 295
                 778888885533332 PP

  == domain 5  score: 36.6 bits;  conditional E-value: 4.6e-12
     HEAT_EZ   1 wrvRraAawaLGrlaggepellqplvpeilpaLlalLnddsdeVRaaAagaLgnl 55 
                 w +R+aA++a++++a+g+   ++ +++++l+  l+lL d+++++R+aA+ a g++
  EPX73524.1 385 WSERHAALMAISSIAEGAEKIMKRELSRVLDMVLPLLADPHPRIRWAACNAVGQM 439
                 99***************************************************97 PP

  == domain 6  score: 11.0 bits;  conditional E-value: 0.00049
     HEAT_EZ  19 pellqplvpeilpaLlalLnddsdeVRaaAaga 51 
                 p+ + ++ ++il  L+++L +++++VRa Aa a
  EPX73524.1 445 PDMQVKYPSRILESLIPTLDSPEARVRAHAAAA 477
                 6667778899********************977 PP

  == domain 7  score: 6.2 bits;  conditional E-value: 0.015
     HEAT_EZ   2 rvRraAawaLGrlaggepel.lqplvpeilpaLlalL 37 
                 rvR++Aa+a+ +  +++++  l+p++++il  Ll lL
  EPX73524.1 469 RVRAHAAAAMVNFSEEADNKvLEPYLDDILQRLLVLL 505
                 79******9999777777777*************998 PP

  == domain 8  score: 7.8 bits;  conditional E-value: 0.0048
     HEAT_EZ   3 vRraAawaLGrlaggepellqplvpeilpaLlalL 37 
                 v++ A+ +++++a  ++    ++ ++i+p+L++ L
  EPX73524.1 512 VQEQAITTIATVADAAAKKFDKYFDAIMPLLISVL 546
                 89******************************877 PP

  == domain 9  score: 0.7 bits;  conditional E-value: 0.82
     HEAT_EZ  13 rlaggepellqplvpeilpaLlalLnddsd 42 
                 r++ + + +  p++  ++p+Lla+ ++++d
  EPX73524.1 612 RICRVLGSDFVPFLGSVMPPLLAAATSKPD 641
                 5566666777788889*********99988 PP

  == domain 10  score: 16.1 bits;  conditional E-value: 1.2e-05
     HEAT_EZ   1 wrvRraAawaLGrlaggepellqplvpeilpaLlalLnddsd 42 
                 +++R aAa ++G +a++++el +   + +lp L  +L+d+++
  EPX73524.1 923 PEIRQAAAYGIGVAAQHGGELYSEICSSALPTLFTMLEDPDA 964
                 689************************************987 PP

  == domain 11  score: -0.9 bits;  conditional E-value: 2.6
     HEAT_EZ   17 gepellqplvpeilpaLlal 36  
                  ++  ++++++++++p L+ +
  EPX73524.1 1027 QNHVAVATQLSVVIPVLADT 1046
                  555678999********944 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0      0.26   2.6e+02       3      29 ..     101     128 ..      99     130 .. 0.84
   2 !    8.3   0.0    0.0031       3.1       3      23 ..     179     199 ..     177     204 .. 0.91
   3 ?    1.7   0.0      0.42   4.2e+02      15      30 ..     279     294 ..     272     295 .. 0.82
   4 ?    1.8   0.0      0.38   3.8e+02      12      30 ..     383     401 ..     375     402 .. 0.79
   5 !   18.2   0.0   2.1e-06    0.0021       1      28 [.     413     440 ..     413     443 .. 0.92
   6 !    7.5   0.0    0.0056       5.6       1      29 [.     455     483 ..     455     485 .. 0.92
   7 ?   -2.1   0.0       6.7   6.7e+03       5      30 ..     591     616 ..     587     617 .. 0.78
   8 ?    2.6   0.0      0.21   2.1e+02      16      28 ..     722     734 ..     719     736 .. 0.88
   9 !   15.3   0.0   1.7e-05     0.017       1      30 [.     910     939 ..     910     940 .. 0.92
  10 ?    2.0   0.0      0.34   3.4e+02       2      14 ..     952     964 ..     951     965 .. 0.91

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.26
                 HHHHHHH.T-SSHHHHHHHHHHHHHHHH CS
        HEAT   3 Plllkll.sDpspeVReaAakaLgalae 29 
                 + ll++  + + p VR   + +++++a+
  EPX73524.1 101 NQLLTCFvQENVPTVRNKLCDTIAEIAR 128
                 678888669999**************97 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.0031
                 HHHHHHHT-SSHHHHHHHHHH CS
        HEAT   3 PlllkllsDpspeVReaAaka 23 
                 Pl+ + lsDps  VR aA++a
  EPX73524.1 179 PLFSTGLSDPSIGVRVAAVRA 199
                 899999*************98 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.42
                 HHHHHHHHHHHHHHHC CS
        HEAT  15 eVReaAakaLgalaev 30 
                 + R+aA++aL+ ++e+
  EPX73524.1 279 SARQAALEALVCFSEG 294
                 56********998876 PP

  == domain 4  score: 1.8 bits;  conditional E-value: 0.38
                 SSHHHHHHHHHHHHHHHHC CS
        HEAT  12 pspeVReaAakaLgalaev 30 
                 + ++ R aA+ a+  +ae+
  EPX73524.1 383 QKWSERHAALMAISSIAEG 401
                 555559***********97 PP

  == domain 5  score: 18.2 bits;  conditional E-value: 2.1e-06
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgala 28 
                 +l+++l ll Dp+p++R aA++a+g+++
  EPX73524.1 413 VLDMVLPLLADPHPRIRWAACNAVGQMS 440
                 58899*********************97 PP

  == domain 6  score: 7.5 bits;  conditional E-value: 0.0056
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalae 29 
                 +l  l+  l +p+++VR+ Aa a+++++e
  EPX73524.1 455 ILESLIPTLDSPEARVRAHAAAAMVNFSE 483
                 68899999****************99986 PP

  == domain 7  score: -2.1 bits;  conditional E-value: 6.7
                 HHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   5 llkllsDpspeVReaAakaLgalaev 30 
                 ++  ++D++  + +  + a g++++v
  EPX73524.1 591 IQMSITDSDDPQASYLISAWGRICRV 616
                 55556899998889999999999987 PP

  == domain 8  score: 2.6 bits;  conditional E-value: 0.21
                 HHHHHHHHHHHHH CS
        HEAT  16 VReaAakaLgala 28 
                 VR+a++k++ +l+
  EPX73524.1 722 VRSASCKCIPQLL 734
                 9********9986 PP

  == domain 9  score: 15.3 bits;  conditional E-value: 1.7e-05
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalaev 30 
                 +lP l + ++ p+pe+R+aAa+ +g  a++
  EPX73524.1 910 FLPYLAEGIQNPEPEIRQAAAYGIGVAAQH 939
                 69**********************987775 PP

  == domain 10  score: 2.0 bits;  conditional E-value: 0.34
                 HHHHHHHHT-SSH CS
        HEAT   2 lPlllkllsDpsp 14 
                 lP+l ++l+Dp++
  EPX73524.1 952 LPTLFTMLEDPDA 964
                 8**********97 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.4      0.98   9.7e+02      35      76 ..      15      60 ..       6      66 .. 0.66
   2 !    6.6   0.0    0.0099       9.9      15      58 ..     154     203 ..     146     226 .. 0.70
   3 ?   -1.1   0.2       2.6   2.5e+03      62      62 ..     297     297 ..     268     343 .. 0.50
   4 !   24.3   0.1   3.1e-08   3.1e-05       5      60 ..     376     441 ..     374     448 .. 0.85
   5 !   13.6   0.1   6.8e-05     0.067      31      73 ..     454     496 ..     447     497 .. 0.92
   6 ?    5.2   0.1     0.029        29       4      40 ..     501     546 ..     498     588 .. 0.65
   7 !   12.8   0.0   0.00012      0.11       2      45 ..     912     964 ..     909     976 .. 0.78

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.98
      HEAT_2 35 aLvellededpavRraaaeaLg..aigdpe..alpaLkellddddd 76
                 Lv+ l ++d  +R +a + L   +i++ +   l+ L++l+++ +d
  EPX73524.1 15 VLVQGLASPDNVIRSEAEKVLTadWIAERAdlLLNGLAALAAQSQD 60
                6778888888888888888876556765431245777776666665 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0099
      HEAT_2  15 evrraairaLg.....rignpealpaLve.llededpavRraaaeaLgai 58 
                   r  + r+++       g + a++ L++  l+d++  vR aa++a + +
  EPX73524.1 154 SFRDSVYRTIAalpllLSGQEAAVAPLFStGLSDPSIGVRVAAVRAYSSV 203
                 55555555555555655678888888888789*************98765 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 2.6
      HEAT_2  62 e 62 
                 +
  EPX73524.1 297 A 297
                 1 PP

  == domain 4  score: 24.3 bits;  conditional E-value: 3.1e-08
      HEAT_2   5 lqalendpdpevrraairaLgrignp..........ealpaLvellededpavRraaaeaLgaigd 60 
                 l  l ++  +  r+aa++a+ +i++           ++l+++++ll d++p++R+aa++a g++ +
  EPX73524.1 376 LPGLISSQKWSERHAALMAISSIAEGaekimkrelsRVLDMVLPLLADPHPRIRWAACNAVGQMST 441
                 55677899999**********88776667777778899************************9975 PP

  == domain 5  score: 13.6 bits;  conditional E-value: 6.8e-05
      HEAT_2  31 ealpaLvellededpavRraaaeaLgaigdpealpaLkelldd 73 
                 ++l+ L++ l++++++vR++aa a++ + ++++ ++L+ +ldd
  EPX73524.1 454 RILESLIPTLDSPEARVRAHAAAAMVNFSEEADNKVLEPYLDD 496
                 78999********************************999976 PP

  == domain 6  score: 5.2 bits;  conditional E-value: 0.029
      HEAT_2   4 LlqalendpdpevrraairaLgrignp..........ealpaLvell 40 
                 Ll +l ++p  +v+ +ai ++++ ++            ++p+L+++l
  EPX73524.1 501 LLVLL-QCPQRYVQEQAITTIATVADAaakkfdkyfdAIMPLLISVL 546
                 45555.66677777777777776655533333333333355555555 PP

  == domain 7  score: 12.8 bits;  conditional E-value: 0.00012
      HEAT_2   2 daLlqalendpdpevrraairaLg...rignp.......ealpaLvellededp 45 
                 ++L + + + p+pe+r+aa+  +g   + g +       +alp+L+ +led+d+
  EPX73524.1 912 PYLAEGI-QNPEPEIRQAAAYGIGvaaQHGGElyseicsSALPTLFTMLEDPDA 964
                 6777788.7899999999999999876333335555676899999999999986 PP

>> Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0         5     5e+03      51      74 ..     242     264 ..     198     290 .. 0.64
   2 !   17.8   0.0   3.8e-06    0.0038       2      50 ..     387     435 ..     386     441 .. 0.95
   3 !   12.8   0.0   0.00014      0.14      23      85 ..     450     513 ..     436     518 .. 0.87
   4 ?    2.6   0.1      0.22   2.2e+02       6      41 ..     516     551 ..     511     601 .. 0.75
   5 ?   -1.8   0.0       4.9   4.8e+03      13      69 ..     568     628 ..     555     635 .. 0.71
   6 ?    1.2   0.0      0.58   5.8e+02      13      59 ..     931     985 ..     925    1012 .. 0.70

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 5
  Vac14_Fab1_bd  51 lyniakvakgevlkllneifdalv 74 
                    l  i+ +a + + k +n+if+   
     EPX73524.1 242 LMAITEIA-EVFPKIFNDIFESYL 264
                    44443333.223345555555544 PP

  == domain 2  score: 17.8 bits;  conditional E-value: 3.8e-06
  Vac14_Fab1_bd   2 arkggligLaavaialekkikeyleeivkpvlkcfsDkdsrvRyyacEs 50 
                    +r+++l+++ ++a + ek +k+ l++++++vl  + D   r+R+ ac +
     EPX73524.1 387 ERHAALMAISSIAEGAEKIMKRELSRVLDMVLPLLADPHPRIRWAACNA 435
                    6999*******************************************97 PP

  == domain 3  score: 12.8 bits;  conditional E-value: 0.00014
  Vac14_Fab1_bd  23 eyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlk.llneifdalvklvaDsdesvk 85 
                    +y ++i+++++ +++  ++rvR +a+ ++ n +  a ++vl+ +l +i++ l  l+   ++ v+
     EPX73524.1 450 KYPSRILESLIPTLDSPEARVRAHAAAAMVNFSEEADNKVLEpYLDDILQRLLVLLQCPQRYVQ 513
                    67889************************************879*****999988776666666 PP

  == domain 4  score: 2.6 bits;  conditional E-value: 0.22
  Vac14_Fab1_bd   6 gligLaavaialekkikeyleeivkpvlkcfsDkds 41 
                    +++++a+va a +kk ++y++ i++ ++++++ ++ 
     EPX73524.1 516 AITTIATVADAAAKKFDKYFDAIMPLLISVLRQAEG 551
                    6788999999999************99999887664 PP

  == domain 5  score: -1.8 bits;  conditional E-value: 4.9
  Vac14_Fab1_bd  13 vaialekk....ikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllnei 69 
                    +a+a++k+    +++ + +++ ++  +++D+d+    y + +   i++v+ ++++ +l ++
     EPX73524.1 568 IALAVGKArflpVSQEVIQVLGTIQMSITDSDDPQASYLISAWGRICRVLGSDFVPFLGSV 628
                    5556666565666666677778888888998887777778888888888888877777665 PP

  == domain 6  score: 1.2 bits;  conditional E-value: 0.58
  Vac14_Fab1_bd  13 vaialekk.....ikeyleeivkpvlkcfsDkdsr..vRyyacEsl.yniakvak 59 
                      i+++++      +e++++ +++++++++D d+r     ya+E +   i+k+++
     EPX73524.1 931 YGIGVAAQhggelYSEICSSALPTLFTMLEDPDARdeEQIYATENIvVAISKICR 985
                    4455554445555788899999999******998733578999976246777776 PP

>> Importin_rep_6  Importin repeat 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.69   6.9e+02      77     107 ..     519     549 ..     511     550 .. 0.88
   2 !   37.8   0.1   1.6e-12   1.6e-09       3     106 ..     773     879 ..     771     881 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.69
  Importin_rep_6  77 slaailkakkseylpalqtllplissylqde 107
                     ++a++  a+ +++ + ++ ++pl+ s+l++ 
      EPX73524.1 519 TIATVADAAAKKFDKYFDAIMPLLISVLRQA 549
                     689999999****************999876 PP

  == domain 2  score: 37.8 bits;  conditional E-value: 1.6e-12
  Importin_rep_6   3 qiyhsalvdgleilganalsedqlakftkgvsanlsdvyervkereneddeynedvdddyddy....tdedlldeinkslaailkakkseylpal 93 
                       y+++l ++le++g  +l+ + ++k  + v   l    +rv+ere+   + + dv++d d       d+++l+ein+++  +lk++k ++ p  
      EPX73524.1 773 SDYFQCLYESLEMVG-PCLDAASMEKLVSVVDLQLKAFIQRVQEREESSRNGEADVEEDEDVIlaveNDQNMLNEINRTFGVVLKQHKATFCPYW 866
                     569*********999.6****************************9998888888888855433333799************************* PP

  Importin_rep_6  94 qtllplissylqd 106
                     ++llp ++ +l+ 
      EPX73524.1 867 ERLLPYMNGFLNG 879
                     **********985 PP

>> Importin_rep_5  Importin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.1   0.0   2.5e-11   2.5e-08       1      50 [.    1010    1058 ..    1010    1061 .. 0.92

  Alignments for each domain:
  == domain 1  score: 34.1 bits;  conditional E-value: 2.5e-11
  Importin_rep_5    1 DeEAApfaYrfLsqLIdqnhpaVlsqnipkvvdsVvqALeaksiqGktAe 50  
                      De+ Ap+aY+fL++L++qnh aV +q ++ v+   +  L+   + G+t +
      EPX73524.1 1010 DEDDAPYAYMFLAELMEQNHVAVATQ-LSVVIPVLADTLASGVLRGRTLA 1058
                      8999*********************9.*****999999999999999866 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.3   0.0    0.0089       8.9      27     127 ..     182     292 ..     173     299 .. 0.66
   2 !   18.5   0.0   1.6e-06    0.0016      29     131 ..     420     528 ..     406     558 .. 0.72
   3 ?   -2.8   0.0       5.7   5.7e+03     137     161 ..     755     779 ..     753     780 .. 0.71
   4 ?    3.2   0.0     0.082        82      20     131 ..     908    1029 ..     866    1054 .. 0.60

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0089
        Cnd1  27 rkrLkDedpyVRktaaivvakLilndmvkekg....flselakll....eDenprVvanalaalteiseksenaiynllpdiisklsd......alnec 111
                  ++L+D++  VR  a+ + + ++l+    +++    +l  l+++l    ++ +++  + +l+a+tei+e  ++++  ++ +++    +      + +++
  EPX73524.1 182 STGLSDPSIGVRVAAVRAYSSVVLESKQSVRDqvipMLPALLNILpplqQERDSENLTECLMAITEIAEVFPKIFNDIFESYL----QfnlgiiKDKDL 276
                 568*******************5555444444214445555555565556777777788888888888876544444444443....333346666779 PP

        Cnd1 112 sewgqitilefLlsyi 127
                 ++ +++  le+L+ + 
  EPX73524.1 277 ENSARQAALEALVCFS 292
                 9999999999988775 PP

  == domain 2  score: 18.5 bits;  conditional E-value: 1.6e-06
        Cnd1  29 rLkDedpyVRktaaivvakL...ilndm.vkekg.flselaklleDenprVvanalaalteiseksenaiyn.llpdiisklsdalnecsewgqitile 121
                  L D++p +R  a  +v ++   + +dm vk    +l+ l   l+ +++rV+a a aa+ + se+++n++++  l di+++l+  l+  ++  q + ++
  EPX73524.1 420 LLADPHPRIRWAACNAVGQMstdFAPDMqVKYPSrILESLIPTLDSPEARVRAHAAAAMVNFSEEADNKVLEpYLDDILQRLLVLLQCPQRYVQEQAIT 518
                 699********************99**84554447******************************556655428899****998555533333333333 PP

        Cnd1 122 fLlsyipkdk 131
                 ++++  +  +
  EPX73524.1 519 TIATVADAAA 528
                 3333333333 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 5.7
        Cnd1 137 lveklcprlqhansavvlaaikviL 161
                 ++ kl + +q + s+++l++   +L
  EPX73524.1 755 ILRKLLDYIQSEPSSEMLSDYFQCL 779
                 5667777777777777777777777 PP

  == domain 4  score: 3.2 bits;  conditional E-value: 0.082
        Cnd1   20 eylvepLrkrLkDedpyVRktaaivvakLilnd..mvke..kgflselaklleDenpr....V..vanalaalteiseksenaiynllpdiisklsd 106 
                  + +++ L ++++ ++p +R+ aa+++    +++  +  e  +  l +l ++leD+++r    +   +n + a+++i +  ++ i  l + i + +++
  EPX73524.1  908 DHFLPYLAEGIQNPEPEIRQAAAYGIGVAAQHGgeLYSEicSSALPTLFTMLEDPDARdeeqIyaTENIVVAISKICRFCSQRIQDLDKIITFWVNT 1004
                  4566777777777777777777776665533332222210023566677777776643222231134555555555555434444444444444443 PP

        Cnd1  107 alnecsewgqitilefLlsyipkdk 131 
                     + +e++  + + fL++ +++++
  EPX73524.1 1005 LPVTHDEDDAPYAYMFLAELMEQNH 1029
                  4444555666666666666665555 PP

>> DUF3385  Domain of unknown function (DUF3385)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       2.1   2.1e+03      88     155 ..     100     165 ..      74     168 .. 0.73
   2 ?   -2.2   0.0       3.5   3.5e+03      85     114 ..     218     248 ..     192     266 .. 0.58
   3 !    8.6   0.0    0.0017       1.7      68     155 ..     436     522 ..     406     524 .. 0.85
   4 ?    6.0   0.0      0.01        10     104     146 ..     513     555 ..     509     570 .. 0.87
   5 !    8.6   0.0    0.0017       1.6     101     139 ..     600     638 ..     575     644 .. 0.81
   6 ?   -2.1   0.0       3.2   3.2e+03     124     153 ..     750     779 ..     736     786 .. 0.82
   7 ?    1.9   0.0      0.19   1.9e+02      81     144 ..     942    1012 ..     919    1027 .. 0.66

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 2.1
     DUF3385  88 inaLlrilkdpslsshhaavveaimnifktlglkcvpfLdqiipallsvirtteesnlrefllqqLat 155
                  n+Ll+ + ++++ + +++  ++i  i ++    c +  +++  +++ ++++ ee ++r+++++ +a 
  EPX73524.1 100 QNQLLTCFVQENVPTVRNKLCDTIAEIARS-VFDCQNQWPELTTTIFGTVNSPEE-SFRDSVYRTIAA 165
                 466666667777777777788888888886.677888888888888888887776.777777776665 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 3.5
     DUF3385  85 tvvinaLlril...kdpslsshhaavveaimni 114
                 +  + aLl+il   +++  s++ ++ + ai+ i
  EPX73524.1 218 M--LPALLNILpplQQERDSENLTECLMAITEI 248
                 3..556666665553333333334444444333 PP

  == domain 3  score: 8.6 bits;  conditional E-value: 0.0017
     DUF3385  68 lsllmvglspsneeyyptvvinaLlrilkdpslsshhaavveaimnifktlglkc.vpfLdqiipallsvirtteesnlrefllqqLat 155
                 + +++++  p  +  yp+ ++++L+  l+ p  +  +a++  a++n  ++ + k+  p+Ld i+++ll +++ +++  ++e  +  +at
  EPX73524.1 436 VGQMSTDFAPDMQVKYPSRILESLIPTLDSPEAR-VRAHAAAAMVNFSEEADNKVlEPYLDDILQRLLVLLQ-CPQRYVQEQAITTIAT 522
                 566778888888999*************999977.7778889999*********9899**********9999.5555888877776665 PP

  == domain 4  score: 6.0 bits;  conditional E-value: 0.01
     DUF3385 104 haavveaimnifktlglkcvpfLdqiipallsvirtteesnlr 146
                 +++++++i ++      k  ++ d i+p l+sv+r++e +++r
  EPX73524.1 513 QEQAITTIATVADAAAKKFDKYFDAIMPLLISVLRQAEGKEFR 555
                 5789999999999999999****************99876555 PP

  == domain 5  score: 8.6 bits;  conditional E-value: 0.0017
     DUF3385 101 sshhaavveaimnifktlglkcvpfLdqiipallsvirt 139
                 +++ +  ++a   i++ lg+  vpfL  ++p ll +  +
  EPX73524.1 600 DPQASYLISAWGRICRVLGSDFVPFLGSVMPPLLAAATS 638
                 5667778999999********************998775 PP

  == domain 6  score: -2.1 bits;  conditional E-value: 3.2
     DUF3385 124 pfLdqiipallsvirtteesnlrefllqqL 153
                 ++ d i+ +ll +i++ ++s+++  ++q L
  EPX73524.1 750 EIWDPILRKLLDYIQSEPSSEMLSDYFQCL 779
                 566789999999999999999999999977 PP

  == domain 7  score: 1.9 bits;  conditional E-value: 0.19
     DUF3385   81 eyyptv...vinaLlril.....kdpslsshhaavveaimnifktlglkcvpfLdqiipallsvirtteesn 144 
                  e y+ +   ++ +L ++l     +d+      +++v ai +i++   ++ ++ Ld+ii   ++++  t+++ 
  EPX73524.1  942 ELYSEIcssALPTLFTMLedpdaRDEEQIYATENIVVAISKICR-FCSQRIQDLDKIITFWVNTLPVTHDED 1012
                  66666511144456677744444444444456799999999999.677779999999998888776666554 PP

>> RTP1_C1  Required for nuclear transport of RNA pol II C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       9.3   9.2e+03       8      26 ..      56      74 ..      52     105 .. 0.78
   2 ?    3.4   0.0     0.082        81       8      84 ..     185     277 ..     181     302 .. 0.73
   3 ?    2.9   0.0      0.12   1.2e+02       8      69 ..     380     441 ..     378     450 .. 0.86
   4 !   11.0   0.1   0.00036      0.36       4      74 ..     459     530 ..     456     553 .. 0.87
   5 ?   -2.0   0.0         4     4e+03      20      20 ..     952     952 ..     881    1000 .. 0.59

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 9.3
     RTP1_C1  8 lqdpllpvrahglvlLrkl 26
                 q++ + +r+  lvl+r++
  EPX73524.1 56 AQSQDISIRSFSLVLIRRI 74
                6899999999999999987 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.082
     RTP1_C1   8 lqdpllpvrahglvlLrkliekkske....avldiekilkllleaLkdedsYvYLnaikgLvaLadvfpeevlklLleey.............e 84 
                 l+dp + vr+ +++  ++++ +++++     +  ++++l++l    ++ ds    ++  +++++a+vfp+ +++ + e y             e
  EPX73524.1 185 LSDPSIGVRVAAVRAYSSVVLESKQSvrdqVIPMLPALLNILPPLQQERDSENLTECLMAITEIAEVFPK-IFNDIFESYlqfnlgiikdkdlE 277
                 89*****************999987755545555566666666666688888888999999999999976.88888888866666665444443 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.12
     RTP1_C1   8 lqdpllpvrahglvlLrkliekkskeavldiekilkllleaLkdedsYvYLnaikgLvaLad 69 
                 ++++    r  +l+ +++++e  +k  + +++++l+++l  L+d+ + +  +a +++ ++ +
  EPX73524.1 380 ISSQKWSERHAALMAISSIAEGAEKIMKRELSRVLDMVLPLLADPHPRIRWAACNAVGQMST 441
                 56777777999*************99******************998888888888887765 PP

  == domain 4  score: 11.0 bits;  conditional E-value: 0.00036
     RTP1_C1   4 alkdlqdpllpvrahglvlLrkliekkske.avldiekilkllleaLkdedsYvYLnaikgLvaLadvfpee 74 
                  +  l +p++ vrah+   + +  e+ +++  +  ++ il+ ll  L+ +  Yv  +ai +++++ad+  ++
  EPX73524.1 459 LIPTLDSPEARVRAHAAAAMVNFSEEADNKvLEPYLDDILQRLLVLLQCPQRYVQEQAITTIATVADAAAKK 530
                 566799*******************9997733446899****************************998765 PP

  == domain 5  score: -2.0 bits;  conditional E-value: 4
     RTP1_C1  20 l 20 
                 l
  EPX73524.1 952 L 952
                 2 PP

>> MMS19_C  RNAPII transcription regulator C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       3.6   3.6e+03     128     154 ..      88     114 ..      85     141 .. 0.73
   2 !    6.4   0.0    0.0041       4.1       1     108 [.     220     325 ..     220     341 .. 0.78
   3 !   11.2   0.1   0.00015      0.15     347     422 ..     469     544 ..     449     545 .. 0.83
   4 ?    0.4   0.0      0.28   2.7e+02      92     128 ..     951     988 ..     910    1049 .. 0.67

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 3.6
     MMS19_C 128 vrslssskqqevleevvalfltgdask 154
                   s+s++ +q++ +++ ++f++++  +
  EPX73524.1  88 FSSISAEAKQTLQNQLLTCFVQENVPT 114
                 566777778888888888888776655 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0041
     MMS19_C   1 pallatLpdsaseasasayervLeaLaelss.ekqlfetlvirlln.kldlvlksnessaayahailstllkllekkqtdlekeellnsyydrivprll 97 
                 pall+ Lp  ++e++++++ ++L a++e+++  +++f+ +    l+  l ++ +++ + +    a l++l+   e    ++    +  +y++++v ++l
  EPX73524.1 220 PALLNILPPLQQERDSENLTECLMAITEIAEvFPKIFNDIFESYLQfNLGIIKDKDLE-NSARQAALEALVCFSEGAP-AM--CRRSPEYANQLVLQCL 314
                 799999****99*99999*************99*****99986665255666666655.6666688888876666655.44..78999**********9 PP

     MMS19_C  98 tlvvsaastss 108
                  l+++ a +++
  EPX73524.1 315 MLMTDVAGDEE 325
                 99988877654 PP

  == domain 3  score: 11.2 bits;  conditional E-value: 0.00015
     MMS19_C 347 etkenyLvALshllkhvPkslllpeLptLlPlLlqaLdlpdaevkastLetlksileespslvsehlssLvprLLk 422
                   ++    A+ +  +   +++l p+L ++l  Ll  L++p++ v+  +++t++ +++ +++ ++++ +++ p L++
  EPX73524.1 469 RVRAHAAAAMVNFSEEADNKVLEPYLDDILQRLLVLLQCPQRYVQEQAITTIATVADAAAKKFDKYFDAIMPLLIS 544
                 5555555677777788899*****************************************************9985 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.28
     MMS19_C  92 ivprlltlvvsaastss.siltddrllevlgriinliv 128
                  +p l+t++ +  + ++ +i+  ++++ ++++i+++  
  EPX73524.1 951 ALPTLFTMLEDPDARDEeQIYATENIVVAISKICRFCS 988
                 44444444444333333445555555555555554443 PP

>> DUF4042  Domain of unknown function (DUF4042)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       1.3   1.3e+03      33      66 ..      91     125 ..      68     129 .. 0.74
   2 !    7.4   0.0    0.0033       3.3      38      73 ..     174     209 ..     166     215 .. 0.84
   3 ?    3.6   0.0     0.049        49      44      67 ..     416     439 ..     390     449 .. 0.87
   4 ?    1.1   0.0      0.28   2.8e+02      94     127 ..     747     780 ..     745     784 .. 0.88
   5 ?   -1.6   0.0       1.9   1.9e+03      13      32 ..     854     872 ..     850     882 .. 0.83
   6 ?   -1.1   0.0       1.4   1.4e+03      63      79 ..    1056    1072 ..    1052    1086 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1.3
     DUF4042  33 e.vlqerkseatLltillkDpspkvRaaalqvlaa 66 
                   +  ++  +++Llt+ ++ + p vR     ++a+
  EPX73524.1  91 IsAEAKQTLQNQLLTCFVQENVPTVRNKLCDTIAE 125
                 43455666678899999999999999776666665 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0033
     DUF4042  38 rkseatLltillkDpspkvRaaalqvlaalLdgsks 73 
                 + + a L++++l+Dps+ vR+aa+ + ++++ +sk+
  EPX73524.1 174 EAAVAPLFSTGLSDPSIGVRVAAVRAYSSVVLESKQ 209
                 55667899******************9998887776 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.049
     DUF4042  44 LltillkDpspkvRaaalqvlaal 67 
                 ++  ll Dp+p++R aa +++ ++
  EPX73524.1 416 MVLPLLADPHPRIRWAACNAVGQM 439
                 4556899*************9999 PP

  == domain 4  score: 1.1 bits;  conditional E-value: 0.28
     DUF4042  94 sLasiimelhrglllaleaetslqvltqllkcLa 127
                 ++a+i   + r ll  +++e s+++l   ++cL 
  EPX73524.1 747 KVAEIWDPILRKLLDYIQSEPSSEMLSDYFQCLY 780
                 67777788889*********************95 PP

  == domain 5  score: -1.6 bits;  conditional E-value: 1.9
     DUF4042  13 lvkavdkkslygyWhvllpd 32 
                 + k+  k ++  yW+ llp 
  EPX73524.1 854 VLKQ-HKATFCPYWERLLPY 872
                 6777.89999********96 PP

  == domain 6  score: -1.1 bits;  conditional E-value: 1.4
     DUF4042   63 vlaalLdgsksfLsqae 79  
                  +la lL+ sk +Lsq  
  EPX73524.1 1056 TLARLLEASKAYLSQFP 1072
                  689***********965 PP

>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.1      0.58   5.8e+02       5      24 ..     208     233 ..     206     250 .. 0.65
   2 ?    0.1   0.0      0.94   9.4e+02      13      40 ..     413     440 ..     411     441 .. 0.86
   3 ?    4.0   0.0     0.055        54      13      39 ..     455     481 ..     453     483 .. 0.88
   4 !    6.7   0.1    0.0076       7.6      13      37 ..     497     521 ..     495     525 .. 0.91
   5 ?   -2.9   0.0       8.2   8.2e+03      30      41 .]     974     985 ..     972     985 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.58
                 HHHHHHTTHHHHHHHHTT.......TS CS
         Arm   5 kdavieaGavppLvrLLs.......se 24 
                 k+ v+++ ++p L +LL+         
  EPX73524.1 208 KQSVRDQ-VIPMLPALLNilpplqqER 233
                 5666766.99***99998555555555 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.94
                 HHHHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm  13 avppLvrLLssedeevqeeAawALsNLa 40 
                 +++  + LL +++++++ +A+ A++ ++
  EPX73524.1 413 VLDMVLPLLADPHPRIRWAACNAVGQMS 440
                 6788899**********99999998776 PP

  == domain 3  score: 4.0 bits;  conditional E-value: 0.055
                 HHHHHHHHTTTSSHHHHHHHHHHHHHH CS
         Arm  13 avppLvrLLssedeevqeeAawALsNL 39 
                 +++ L+  L+s+  +v+  Aa+A+ N 
  EPX73524.1 455 ILESLIPTLDSPEARVRAHAAAAMVNF 481
                 67789999***************9995 PP

  == domain 4  score: 6.7 bits;  conditional E-value: 0.0076
                 HHHHHHHHTTTSSHHHHHHHHHHHH CS
         Arm  13 avppLvrLLssedeevqeeAawALs 37 
                 ++++L+ LL+++   vqe+A ++++
  EPX73524.1 497 ILQRLLVLLQCPQRYVQEQAITTIA 521
                 799******************9985 PP

  == domain 5  score: -2.9 bits;  conditional E-value: 8.2
                 HHHHHHHHHHTT CS
         Arm  30 eeAawALsNLaa 41 
                 e+++ A+s +++
  EPX73524.1 974 ENIVVAISKICR 985
                 8999******97 PP

>> Xpo1  Exportin 1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0   0.00095      0.94       3      39 ..     114     152 ..     112     168 .. 0.82
   2 ?    0.6   0.1      0.55   5.5e+02      73     142 ..     208     281 ..     205     288 .. 0.74
   3 ?   -2.4   0.0       4.4   4.4e+03     108     125 ..     505     522 ..     499     564 .. 0.59
   4 ?   -2.0   0.0       3.5   3.5e+03      99     135 ..     747     782 ..     724     794 .. 0.63
   5 ?   -1.3   0.0       2.1   2.1e+03      84     124 ..    1040    1077 ..    1017    1084 .. 0.70

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00095
                 HHHHHHHHHHHHHHHHHT..TTTSTTHHHHHHHHHCT.H CS
        Xpo1   3 flrnklaealaelflqey..pnnWpsffddllsllsssp 39 
                  +rnkl+ ++ae+++  +  +n+Wp++ ++++  ++s +
  EPX73524.1 114 TVRNKLCDTIAEIARSVFdcQNQWPELTTTIFGTVNSPE 152
                 69*************99999***********99999853 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.55
                 HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTTS-..HHHHHTSCHHHHHHHHCCSCCC....H CS
        Xpo1  73 kdllrsnvqkilelllqileqsqskkqsselveavLkclsswvswid..iglivnnpllnllfqlLsdpel....r 142
                 k+  r++v  +l  ll+il   q++   se + ++L +++   + ++   + i+++ +l++ + +++d++l    r
  EPX73524.1 208 KQSVRDQVIPMLPALLNILPPLQQE-RDSENLTECLMAITEIAEVFPkiFNDIFES-YLQFNLGIIKDKDLensaR 281
                 7788999999999999999998887.589999999999998888666334677776.7777777777777744444 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 4.4
                 HHHHHHHTTTS-HHHHHT CS
        Xpo1 108 Lkclsswvswidiglivn 125
                 L+c +++v++  i++i+ 
  EPX73524.1 505 LQCPQRYVQEQAITTIAT 522
                 677777777777777762 PP

  == domain 4  score: -2.0 bits;  conditional E-value: 3.5
                 HHHHHHHHHHHHHHHHTTTS-HHHHHTSCHHHHHHHH CS
        Xpo1  99 qsselveavLkclsswvswidiglivnnpllnllfql 135
                 + +e+++ +L+ l  +++  + + ++++ + + l++ 
  EPX73524.1 747 KVAEIWDPILRKLLDYIQSEPSSEMLSD-YFQCLYES 782
                 4455666666666666666666665554.55555555 PP

  == domain 5  score: -1.3 bits;  conditional E-value: 2.1
                  HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTTS-HHHHH CS
        Xpo1   84 lelllqileqsqskkqsselveavLkclsswvswidigliv 124 
                  + +l + l + +    + +++   L++ ++++s+++++++ 
  EPX73524.1 1040 IPVLADTLASGVL---RGRTLARLLEASKAYLSQFPVDQVN 1077
                  4444444444443...4678888999999999999999985 PP

>> V-ATPase_H_N  V-ATPase subunit H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1       1.2   1.2e+03     173     173 ..     166     166 ..      31     317 .. 0.61
   2 ?    7.8   0.0    0.0018       1.8      90     199 ..     474     592 ..     453     607 .. 0.76
   3 ?   -4.0   0.0       6.7   6.7e+03     139     158 ..     764     783 ..     747     810 .. 0.64
   4 ?    2.8   0.0     0.058        58     105     161 ..     909     997 ..     896    1092 .. 0.65

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.2
  V-ATPase_H_N 173 l 173
                   l
    EPX73524.1 166 L 166
                   1 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0018
  V-ATPase_H_N  90 rvelflslakkeeqd........pwkpflkllnrqddfivllalrllakllvqgkkksnklvesaLnrllqlLssqlssstnevieiavrllqel.l 177
                    ++++ +++++ +++        +++ +l ll+ ++++++++a++ +a+++ +++kk  k  + +++ l+++L++ + ++ + +   a+++   + l
    EPX73524.1 474 AAAAMVNFSEEADNKvlepylddILQRLLVLLQCPQRYVQEQAITTIATVADAAAKKFDKYFDAIMPLLISVLRQAEGKEFRTLRGKAMECATLIaL 570
                   55566666666666644545555777788888889*************************99************97777777676666666654326 PP

  V-ATPase_H_N 178 rtkeyRelfveadgvstlisil 199
                    + + R+l v+++ +++l +i 
    EPX73524.1 571 AVGKARFLPVSQEVIQVLGTIQ 592
                   7788888888888888887754 PP

  == domain 3  score: -4.0 bits;  conditional E-value: 6.7
  V-ATPase_H_N 139 snklvesaLnrllqlLssql 158
                   ++++++++L +++q L ++l
    EPX73524.1 764 QSEPSSEMLSDYFQCLYESL 783
                   23334455555555555544 PP

  == domain 4  score: 2.8 bits;  conditional E-value: 0.058
  V-ATPase_H_N 105 pwkpflk.llnrqddfivllalrllakllvqgkkksnklvesaLnrllqlLssqlss...............................s 161
                    + p+l   +++++  i + a++ +   + +g +  +++ +saL++l+++L++  +                                 
    EPX73524.1 909 HFLPYLAeGIQNPEPEIRQAAAYGIGVAAQHGGELYSEICSSALPTLFTMLEDPDARdeeqiyatenivvaiskicrfcsqriqdldkI 997
                   6788888788899999**********************99************9444423444444444444444444444444444440 PP

>> DNA_alkylation  DNA alkylation repair enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.1   0.00029      0.29     131     183 ..     381     440 ..     315     450 .. 0.81
   2 ?   -3.1   0.0       5.3   5.2e+03     110     161 ..     489     539 ..     483     543 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00029
  DNA_alkylation 131 senlWerRaAivatlklikk.......tdlellleiaeelladkedfiqkAiGwaLrels 183
                     s + W  R A+++ ++ i +        +l+++l+++  llad++ +i++A ++a  ++s
      EPX73524.1 381 SSQKWSERHAALMAISSIAEgaekimkRELSRVLDMVLPLLADPHPRIRWAACNAVGQMS 440
                     556788888888888888888999*99************************999987777 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 5.3
  DNA_alkylation 110 ivgalladkperrdllkeWaksenlWerRaAivatlklikk..tdlellleiae 161
                     +++++l d    ++ l  + + ++++++  Ai +  + + +  +++++ ++ + 
      EPX73524.1 489 VLEPYLDD---ILQRLLVLLQCPQRYVQEQAITTIATVADAaaKKFDKYFDAIM 539
                     55555444...6888888999999999999999888888887788888777765 PP

>> ParcG  Parkin co-regulated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.0   0.00094      0.94      40     117 ..     178     258 ..     173     282 .. 0.84
   2 ?   -2.3   0.0       4.2   4.2e+03     117     136 ..     861     880 ..     850     897 .. 0.79
   3 ?   -2.5   0.0       4.9   4.9e+03      37      65 ..     908     936 ..     901     973 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00094
       ParcG  40 LplffdGlretkhpyrflategikdllea...ageekilpvlpklilplkeaLntrdeeviesaLkvlqklvkaseligea 117
                  plf +Gl++ +   r+ a+++ + ++ +   + +++++p+lp l   l    + rd+e ++ +L ++ ++ ++ + i + 
  EPX73524.1 178 APLFSTGLSDPSIGVRVAAVRAYSSVVLEskqSVRDQVIPMLPALLNILPPLQQERDSENLTECLMAITEIAEVFPKIFND 258
                 689*******************99987776778899*********9999998899**************998887777655 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 4.2
       ParcG 117 aLvpyyrqlLpvlnlfknkr 136
                    py+ +lLp +n f n +
  EPX73524.1 861 TFCPYWERLLPYMNGFLNGS 880
                 5689********99887654 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 4.9
       ParcG  37 dalLplffdGlretkhpyrflategikdl 65 
                 d++Lp +++G+++ +   r  a  gi   
  EPX73524.1 908 DHFLPYLAEGIQNPEPEIRQAAAYGIGVA 936
                 599********999988888888887655 PP

>> DUF445  Protein of unknown function (DUF445)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00033      0.33      94     240 ..     703     856 ..     685    1007 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00033
      DUF445  94 keiledlddesikellkknlkkkleevipepllgkllellleeerhkkllddlldriknllkdeevkekikelidelieeesgklv.......lesivs 185
                 +e+l+++    +k ++ + +++   ++ip+ l ++++    +  ++ ++ d +l+++ +++++e ++e +++ ++ l e+  +++         e++vs
  EPX73524.1 703 NEVLTSVVLPGLKFFFHDGVRSASCKCIPQLLNSRIIASNRDPVKVAEIWDPILRKLLDYIQSEPSSEMLSDYFQCLYESL-EMVGpcldaasMEKLVS 800
                 55666666667777888888899999**********************************************999998888.4444899***9999999 PP

      DUF445 186 mflreltsilekvksdpdhllreeed.kkvreliadllndpelaakveklkkkkls 240
                  +  +l+ ++++v++ ++ + + e d ++ ++ i  ++nd+++ +++++    +l+
  EPX73524.1 801 VVDLQLKAFIQRVQEREESSRNGEADvEEDEDVILAVENDQNMLNEINRTFGVVLK 856
                 99999999******777776666655233356899999999999999876555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1095 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       542  (0.0302304); expected 358.6 (0.02)
Passed bias filter:                      474  (0.0264376); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.88u 0.30s 00:00:01.18 Elapsed: 00:00:00.50
# Mc/sec: 6571.37
//
Query:       EPX73525.1  [L=422]
Description: metacaspase Pca1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.7e-59  201.1   0.0    3.2e-59  200.9   0.0    1.1  1  Peptidase_C14  Caspase domain


Domain annotation for each model (and alignments):
>> Peptidase_C14  Caspase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  200.9   0.0   1.8e-63   3.2e-59       1     244 [.     127     415 ..     127     419 .. 0.95

  Alignments for each domain:
  == domain 1  score: 200.9 bits;  conditional E-value: 1.8e-63
                    EEEEEEECSTTSSTCC-STTHHHHHHHHHHHHHHHTTEEEEEEEGGEES.......-CHHHHHHHHHHHHCHSGGTTESEEEEEEESEEET..... CS
  Peptidase_C14   1 kkAliIginnYpgtkaeLrGcanDaermaklLvkrlgFevenililtdd.......ptgknirkalkwlvksadhspgDslvvhysGHGtrvpae. 88 
                    +kAl+Ig n Y +t++eL+Gc+nD+ +  +lL +r+g++ ++++i+td        pt++n+++ ++wlv+ a+  p+Dsl++hysGHG+++++  
     EPX73525.1 127 RKALLIGLN-YVNTRNELQGCINDVMATGQLLRERYGYKADDMVIMTDYaqhprgiPTRQNMLDGMRWLVSGAQ--PNDSLFFHYSGHGGQTKDLd 219
                    79*******.****************************************************************..**************877778 PP

                    .........EEECTTC..SSEEEHHHHHHTTSTTTHGGGTTS-EEEEEESES.SSBCBEEEEEEES-SSS.......................... CS
  Peptidase_C14  89 .........civpvdv..nsliqdddirdlfggdklpslagkpktiiidaCr.gglldkgiekdtsptnk.......................... 146
                             +i+p d+  ++ i dd+++d++ +++lp ++  ++t+i+d+C+ gg+ld ++  +t+   k                          
     EPX73525.1 220 gdetdgydeTIYPLDHevSGQIVDDEMHDIM-VRPLPPGC--RLTAIFDSCHsGGALDLPFTYSTKGVLKepnmlkesgmnvlhagmsymagdigg 312
                    99***************87788887787777.9*******..***********************999999************************* PP

                    ........HCCCHCHHHHHHCSHHCEEECTTTSEEEEESSSTTBSCEEETTTEE...HHHHHHHHHH.HHHTTTSBHHHHHHHHHHHHCCTTTCTT CS
  Peptidase_C14 147 ........feedssskekkpekqslsklpseadvlllsgcqddqtSadgsengs...aftqalqkvl.eekggkislkellnkvrkrlkslkkkng 230
                            +++ s    +++++ s++   s+adv+++sgc+d+qtSad++ ng+   a+++a+ +vl ++++   s+ +ll+ +r+ l ++k    
     EPX73525.1 313 ifsnvkniVQSASGGFHNNALQYSRQYKFSPADVISISGCKDNQTSADTNVNGFatgALSYAFREVLsQNPQP--SYIQLLQGIRHVL-QSK---- 401
                    *******9899999999**************************************************666666..*************.555.... PP

                    SBEEEEEEEEESSS CS
  Peptidase_C14 231 ykqrPglssndltk 244
                    y+q P+l +++  +
     EPX73525.1 402 YSQLPQLCCSHPLD 415
                    *********98766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (422 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       436  (0.0243181); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.28s 00:00:00.80 Elapsed: 00:00:00.45
# Mc/sec: 2792.27
//
Query:       EPX73526.1  [L=587]
Description: phosphoglucomutase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      8e-42  142.2   0.1    1.5e-41  141.3   0.1    1.4  1  PGM_PMM_I    Phosphoglucomutase/phosphomannomutase, alpha/bet
      1e-19   71.0   0.0    2.4e-19   69.8   0.0    1.6  1  PGM_PMM_II   Phosphoglucomutase/phosphomannomutase, alpha/bet
    1.8e-13   50.6   0.1    3.3e-13   49.8   0.1    1.4  1  PGM_PMM_III  Phosphoglucomutase/phosphomannomutase, alpha/bet
    4.6e-07   29.9   0.0    9.9e-06   25.7   0.0    2.4  2  PGM_PMM_IV   Phosphoglucomutase/phosphomannomutase, C-termina


Domain annotation for each model (and alignments):
>> PGM_PMM_I  Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.3   0.1   3.4e-45   1.5e-41       3     134 ..      46     183 ..      44     186 .. 0.97

  Alignments for each domain:
  == domain 1  score: 141.3 bits;  conditional E-value: 3.4e-45
                 GBBTTCEEEECCHCT..BSCCHHHHHHHHHHHHCHHC...STS-EEEEEE-S-TTHHHHHHHHHHHHHCCT-CEEEEE.EB-HHHHHHHHHHCCECEEE CS
   PGM_PMM_I   3 kfgtsGlRgkvgege..ltpelveklgqaiaeylkae...akkkkvvvGrDtRvssrelaealaaglaanGvevillg.llptPavsfairklkadagi 95 
                  fgtsGlR ++g+g   ++  +v +++q++aeyl ++   +++  vvvG+D+R+ s+++a+ +aa ++++G++v+ +g l++tP v f++++lka+ag+
  EPX73526.1  46 GFGTSGLRAEIGAGFarMNSLTVIQASQGFAEYLIQTvpgSQEMGVVVGHDHRHNSQQFARLTAAAFLNKGFKVYAYGfLIHTPLVPFTVKNLKAAAGV 144
                 6************999***********************999********************************************************* PP

                 EE--TTS-TTCCCEEEEETTTCE--CHHHHHHHHHHCCT CS
   PGM_PMM_I  96 mitaSHnppeyngiKvylsnGgpispeveekIeaiieke 134
                 mitaSHnp+ yng+Kvy+snG  i p++++ I+++i+k+
  EPX73526.1 145 MITASHNPAAYNGYKVYWSNGSAIIPPHDKGIATCIDKN 183
                 ***********************************9987 PP

>> PGM_PMM_II  Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.8   0.0   5.4e-23   2.4e-19      15     100 ..     226     316 ..     210     319 .. 0.89

  Alignments for each domain:
  == domain 1  score: 69.8 bits;  conditional E-value: 5.4e-23
                 HHHHHT-EEEEE-TT-TTHHHHHHHHHHTT-....EEEES-----TT-TT.SS----TT-TTTTHHHHGGGGG-SEEEEE-TTS-BEEEEE CS
  PGM_PMM_II  15 aikksglkvvidplhGaggeilkellkelgv....dvvelnaepdpdfpt.kapnpeekealkllielvkkegadlglafDgDaDRlgvvd 100
                  +  ++lk+v++p hG+g  ++ ++l  +g     + v+l++ p+pdfpt k+pnpee+ al+l+ + +++++ + +la+D+DaDR+++++
  EPX73526.1 226 SLDMKPLKFVYTPIHGVGLPFVTSALALFGEkadmISVPLQDSPNPDFPTvKFPNPEEEGALDLAYKQADAHDVSYVLATDPDADRFAFAE 316
                 456679**********************99999888889*******************99****************************996 PP

>> PGM_PMM_III  Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.8   0.1   7.4e-17   3.3e-13       2     108 ..     327     446 ..     326     452 .. 0.83

  Alignments for each domain:
  == domain 1  score: 49.8 bits;  conditional E-value: 7.4e-17
                  HHHHHHHHHHHHHCH....CSTTT...C.EEEEETTS-THHHHHHHHTT-EEEEESSSCHHHHHHHHHTT.....ECEEEETTCEEEETTTBSS--HH CS
  PGM_PMM_III   2 gdqllallakyllee....klkpg...a.gvvktvmtslalervakklgiklvetkvGdkyvleemkeeg.....avlGgEeSghiifldeattkDGi 86 
                  gd+++ +la  +++e        +      v +t ++s +++++ak  g ++vet +G+k+++++  e +     + l++Ee  +++++  +++kDG+
   EPX73526.1 327 GDEVGCILAYFIFQEyknaG---KpvdDfYVLSTTVSSALMKSMAKVEGFHHVETLTGFKWLGNAAAELEdqgkfVGLAYEEALGYMVGGIVKDKDGV 421
                  9***********88865432...2555457***********************************99997778999********************** PP

                  HHHHHHHHHHHHHT...S-HHHHHH CS
  PGM_PMM_III  87 laallvleilaetg...kslselle 108
                   a l +l++l++ +    s+ ++ +
   EPX73526.1 422 NALLTFLHLLKRLKlqqLSVTQVFD 446
                  *********9965322245555555 PP

>> PGM_PMM_IV  Phosphoglucomutase/phosphomannomutase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0     0.079   3.6e+02      36      48 ..     472     484 ..     455     485 .. 0.82
   2 !   25.7   0.0   2.2e-09   9.9e-06      22      69 ..     518     568 ..     495     573 .. 0.75

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.079
                 EEEE.EEEETTCC CS
  PGM_PMM_IV  36 GrrlavRpSGTep 48 
                 G++ a+R S+Te+
  EPX73526.1 472 GLVDALRKSNTEN 484
                 555559******7 PP

  == domain 2  score: 25.7 bits;  conditional E-value: 2.2e-09
                 THHCCCCCCCCGCCEEEE..EEEETTCCEEEEEEEES..SHHHHHHHHHHH CS
  PGM_PMM_IV  22 vasikeglkilledGrrla.vRpSGTepllrvyvEak..sdeelarlaeev 69 
                 v + ++ + + le+G ++  +R SGTep+l+ y+ a+  ++ee+++ a ev
  EPX73526.1 518 VSKSSDNVTFELENGQVIMtIRTSGTEPKLKYYICARgsTSEEAQQNAREV 568
                 336789999*********99**************99994455555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (587 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       527  (0.0293937); expected 358.6 (0.02)
Passed bias filter:                      451  (0.0251548); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 4457.30
//
Query:       EPX73527.1  [L=221]
Description: F0-ATPase delta subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-45  155.1   0.6    2.2e-45  154.9   0.6    1.0  1  OSCP      ATP synthase delta (OSCP) subunit


Domain annotation for each model (and alignments):
>> OSCP  ATP synthase delta (OSCP) subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  154.9   0.6   1.2e-49   2.2e-45       3     170 ..      46     215 ..      44     217 .. 0.97

  Alignments for each domain:
  == domain 1  score: 154.9 bits;  conditional E-value: 1.2e-49
        OSCP   3 rrYAkAlfelAkekgaleeveeelealeavlaedkklaellsnpavsaeekkdlleelfke.klseavknflkllaenkRlalLpeiaeefeellaear 100
                 + YA++l+++A ++++l++ve+ l++l a+l+e ++l++++snp+++ e+kk ++++l k    + ++ nf++ll+ n+RlalL+ i ++fe++++++r
  EPX73527.1  46 GVYASSLYTAAVKESKLDRVEKALTTLGATLKERPELSQFISNPSINYEDKKLIVSSLSKMtGGDALLGNFFNLLSVNNRLALLSRIQNQFEKIMRAQR 144
                 67********************************************************999677999******************************** PP

        OSCP 101 giveaeVtsavpLtdeqlekleaal.akklgkkkvkleekvdpsliGGvvvkvgdkviDgSvkgkLeklke 170
                 g+ve+++tsa+pL++++l++le+++ ++k+gk k+ +++kv ps++GG+++++gd+++D Sv+++++ l++
  EPX73527.1 145 GEVEVTITSAAPLDSKTLSRLESKIaKSKYGKGKLLVQNKVSPSILGGLILEIGDNILDVSVSSRVNHLNQ 215
                 *************************77899999***********************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       447  (0.0249317); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1728.94
//
Query:       EPX73528.1  [L=342]
Description: phosphoprotein phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.6e-15   55.8   0.7    1.2e-14   55.3   0.7    1.2  1  Metallophos  Calcineurin-like phosphoesterase
  ------ inclusion threshold ------
      0.094   11.0   0.1       0.76    8.0   0.0    2.2  3  FBPase_2     Firmicute fructose-1,6-bisphosphatase


Domain annotation for each model (and alignments):
>> Metallophos  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.3   0.7   1.3e-18   1.2e-14       2     203 ..      68     290 ..      67     291 .. 0.71

  Alignments for each domain:
  == domain 1  score: 55.3 bits;  conditional E-value: 1.3e-18
                  EEEEEESBTBTTCCTHHHHHHHHHHHH.......HHH...TTESEEEEESTSSSSSHHHHHHHHHHHHHHHH....TSEEEEEC-TTSCHHH.HHHHH CS
  Metallophos   2 rilvigDlHlalgggqlddllkllddl.......lre...ekpdlvllaGDlvdrgdlekellellaalvky....pipvylllGNHegfee.ellnk 84 
                  ++  igD+H     g+++++l++l+ +       +      ++  ++ +GD+vdrg+   +l +++++l  +    + +v+ llGNHe f++ +  ++
   EPX73528.1  68 KVFAIGDIH-----GDFHNALDILSAAgvvspvdP-FewtAGNATLVQTGDIVDRGPDTRFLFKWFDKLSTQaeqqGGRVIRLLGNHE-FMNaKGDWR 158
                  7899*****.....**********88877665442.045567799999********9888888889888888999999**********.666566666 PP

                  HHHHHHH...HHHHEHH.......HCEEETSEEEEEETTE....EEEEEEESE.CEEE...THHHHHHHHHHHSCHHHHCC.....HHHHHHHHHHTT CS
  Metallophos  85 ygylgif...sepwrsd.......aevfnnlplaslgsgs....lkvlllhGg.spel...lvsldklgslnleleapepg.....dewlkdlekrek 159
                  y ++g     +ep+  +        +  + l +  +  ++     + +++h+g spe+    ++++++g+ +le   + ++     +e++        
   EPX73528.1 159 YVHYGDLvsyPEPYIENrkydwgpEGAIGDLLITKYNVTFkdeiSRSHFMHAGlSPEWsmqEDFVNSMGHDVLEMFMKGEElsdelKEFWGI------ 250
                  5555555444333333333223332222333333344444677999*******999998886677777777777666666677778888888...... PP

                  CSEEEEEESSESSCSSSCSCCHHHHH.....HHHHHTTESEEEEESSSS CS
  Metallophos 160 adwvivlgHsplyrgsgylfgdeale.....dllkkygvdlvisGHtHv 203
                            p++ + gy   + +++     ++ k  +vd  ++GHt +
   EPX73528.1 251 --------KGPMW-YRGYAQLPTEIAcevayNVTKTLNVDRLVMGHTPQ 290
                  ........99999.55555555555555999***************975 PP

>> FBPase_2  Firmicute fructose-1,6-bisphosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1       0.1   9.4e+02      36      57 ..      71      91 ..      64      93 .. 0.79
   2 ?   -0.5   0.0     0.032   2.8e+02     190     204 ..     110     124 ..     105     147 .. 0.80
   3 ?    8.0   0.0   8.5e-05      0.76     522     559 ..     281     315 ..     255     320 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.1
    FBPase_2 36 flsDiHGeyeafshvlknasGv 57
                 + DiHG++++   +l   +Gv
  EPX73528.1 71 AIGDIHGDFHNALDILSA-AGV 91
                589******999999964.455 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.032
    FBPase_2 190 vGDiyDRGpeadkil 204
                  GDi DRGp +  ++
  EPX73528.1 110 TGDIVDRGPDTRFLF 124
                 7********987665 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 8.5e-05
    FBPase_2 522 shiinGHvPvkvkkGesPikangkllviDGGfskaYqk 559
                  +++ GH+P    +G +  ++ng++++iD G+s+aY  
  EPX73528.1 281 DRLVMGHTPQF--SGIR-SRCNGQIVLIDTGLSSAYSG 315
                 67899999944..5544.49****************76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       309  (0.0172346); expected 358.6 (0.02)
Passed bias filter:                      290  (0.0161749); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2571.20
//
Query:       EPX73529.1  [L=377]
Description: protein disulfide isomerase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    0.00022   21.2   0.0    0.00069   19.6   0.0    1.7  2  Thioredoxin_6  Thioredoxin-like domain
  ------ inclusion threshold ------
      0.054   13.9   0.1       0.49   10.8   0.3    2.3  2  REV1_C         DNA repair protein REV1 C-terminal domain


Domain annotation for each model (and alignments):
>> Thioredoxin_6  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   7.6e-08   0.00069      15     123 ..      74     184 ..      63     192 .. 0.82
   2 ?   -2.1   0.0      0.36   3.2e+03     126     159 ..     234     266 ..     231     282 .. 0.67

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 7.6e-08
                    HTTT-T.TSEEEEE--HHHHHHTT--S.SEEEEEETTTTEEEEEETH....T--HHHHHHHHHHH---SEEE-SHHHHHHHHTSS--EEEEEEE-T CS
  Thioredoxin_6  15 vakelkgdvrfgvtkskevadklgvke.pavllfrkfdeekvkydge....kitvddlkkfieknslplvreltpenaeelfeeglppllllflkk 105
                      ++l g+     + + +++++++++  p++l +r+    + +y+ +    + +   + ++ +k+ + lv+eltp+ a  l  +    +++l+ + 
     EPX73529.1  74 FSRSLAGYAPIFRSDDQNLVKHYNITRlPHLLAVRN--GIPFSYPAKdvssMRNTIRMCSWAAKHKYALVPELTPQLARSLDDDSYL-AIALINPA 166
                    556666667777788999********9999999998..567788888888788***************************9888855.99999999 PP

                    TSTTHHHHHHHHHHHHHH CS
  Thioredoxin_6 106 ddeeteklkkaiekvake 123
                    +++ ++  +  ++++ak+
     EPX73529.1 167 SHDVESNDLHNVQSIAKQ 184
                    977777777779999997 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.36
                    TT-EEEEEETTGGHHHHH.HTT--GGG-SEEEEEE CS
  Thioredoxin_6 126 dkinfaladaksfkrple.ylglsssdlPvivivd 159
                    +ki+f++++a  +k  l   + ++  ++P+ +++ 
     EPX73529.1 234 RKITFVWLNAFHWKSWLTdVFSIK--SVPQSRFLF 266
                    689999999988888555366555..666666555 PP

>> REV1_C  DNA repair protein REV1 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.18   1.6e+03      17      57 ..      62     109 ..      58     137 .. 0.70
   2 ?   10.8   0.3   5.5e-05      0.49      36      79 ..     171     214 ..     155     220 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.18
      REV1_C  17 gPneeDvealakyLkkvv.......eeerdlekavavlkwlrvlleee 57 
                 g  +eD ++l  + +++        +++++l k +++ ++ + l  ++
  EPX73529.1  62 GSTSEDFDYLRMFSRSLAgyapifrSDDQNLVKHYNITRLPHLLAVRN 109
                 667889999999888888888888888888888888887766665554 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 5.5e-05
      REV1_C  36 eerdlekavavlkwlrvlleeeeeskeeeageaWekafrevkea 79 
                 e++dl++++++ k + + l++ e+s+  +a+++W++ ++++k++
  EPX73529.1 171 ESNDLHNVQSIAKQWVQDLRSIERSQLLQARKEWWDYVKRLKAK 214
                 789**********777777888899***************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (377 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       567  (0.0316247); expected 358.6 (0.02)
Passed bias filter:                      431  (0.0240393); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.21s 00:00:00.69 Elapsed: 00:00:00.37
# Mc/sec: 3031.66
//
Query:       EPX73530.1  [L=275]
Description: NAD dependent epimerase/dehydratase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.7e-05   24.4   0.0    2.7e-05   23.8   0.0    1.3  1  Epimerase       NAD dependent epimerase/dehydratase family
    3.1e-05   23.9   0.0    0.00019   21.4   0.0    2.0  1  NAD_binding_10  NAD(P)H-binding
     0.0019   17.4   0.0      0.064   12.3   0.0    2.3  2  RmlD_sub_bind   RmlD substrate binding domain
  ------ inclusion threshold ------
      0.012   15.1   0.0       0.02   14.4   0.0    1.3  1  adh_short       short chain dehydrogenase
       0.02   14.3   0.0      0.029   13.8   0.0    1.2  1  GDP_Man_Dehyd   GDP-mannose 4,6 dehydratase
      0.024   13.7   0.0      0.064   12.2   0.0    1.7  2  3Beta_HSD       3-beta hydroxysteroid dehydrogenase/isomerase
      0.094   12.6   0.0       0.24   11.3   0.0    1.7  2  LpxI_N          LpxI N-terminal domain


Domain annotation for each model (and alignments):
>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.0     1e-08   2.7e-05       2      53 ..       4      58 ..       3      92 .. 0.70

  Alignments for each domain:
  == domain 1  score: 23.8 bits;  conditional E-value: 1e-08
                EEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC...EEEE--TT-H CS
   Epimerase  2 lVtGatGfiGsalvkallekgyevigldrlssasntarledl...elveldltdr 53
                +V+G++Gf+G +++k+  +kgy+v+ ++r+ +++ + +++     ++ ++d++ +
  EPX73530.1  4 VVLGGSGFLGHNICKHAVAKGYQVVSVSRRGRGNIQFKEPWMekvHWERADVMRD 58
                79**************************996654333333224447777776654 PP

>> NAD_binding_10  NAD(P)H-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.0   7.3e-08   0.00019       1     150 [.       7     201 ..       7     208 .. 0.77

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 7.3e-08
                     TTTSHHHHHHHHHHHHC-T-EEEEEETTHHHCHHHHCT..TTCEEEE--TT.-CCHHHHHHTT-SEEEES-.............--TCCHHHH.. CS
  NAD_binding_10   1 GAtGkvGrllvkellargghevtalvRnpeklaeleae..eglevvegdvt.dvedlaealkgadaVvsal.............ggggkdeeg.. 77 
                     G++G  G+ ++k+++a+ g++v+ + R+     ++++   e+++   +dv+ d+ +l     ga+aV+ ++             +          
      EPX73530.1   7 GGSGFLGHNICKHAVAK-GYQVVSVSRRGRGNIQFKEPwmEKVHWERADVMrDPHSLLPFAHGASAVLNTVgilmesnykqaleN-------Prg 93 
                     9****************.5*******996544446644448999999***7589*****************66665444444431.......034 PP

                     .............................................HHHHHHHHHHCT--EEEEEEETTTTSGCGCHHHHHHHHCCHHHHHHHHHH CS
  NAD_binding_10  78 .............................................aknivdaakeagvkRfvlvsaigvgdevpgefgewnkellkaylaakraa 127
                                                                  a+n++++a ea+v  + ++sa  +    pg +++       +y+  kr+a
      EPX73530.1  94 silqlvknlkgnvfqgsenplkkpaspsvppvnpslnfesvnrdlAINTAKVAAEAHVPVYCYISAHASV---PG-LDP-------RYISTKREA 177
                     5555555666666777777777888888888888899999999999999999999999999999997654...45.333.......578889999 PP

                     HHHHHH.SSSEEEEEEE-CEE-ST CS
  NAD_binding_10 128 eellra.sgldwTivrpggLtdep 150
                     e+ + +  ++   +vrp+++ d  
      EPX73530.1 178 EQAISNiPNIRSIFVRPSFMYDTH 201
                     999999779999999999988865 PP

>> RmlD_sub_bind  RmlD substrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.3   0.0   2.5e-05     0.064       1      45 [.       1      46 [.       1      57 [. 0.79
   2 ?    2.6   0.0     0.023        59     125     156 ..     170     202 ..     163     213 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 2.5e-05
                   EEEEEESTTSHHHHHHHHHCTTTSEEEEEE-TT.T--TTSHHHHHH CS
  RmlD_sub_bind  1 mkilvtGanGqlGseLakqlaeeglevlaltre.eldltdaeavae 45
                   mk++v+G++G lG ++ k + ++g++v++++r+ + +++ +e  +e
     EPX73530.1  1 MKLVVLGGSGFLGHNICKHAVAKGYQVVSVSRRgRGNIQFKEPWME 46
                   89****************************7664666665555555 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.023
                    HHHHHHHHHHHHHH.H-SSEEEEEE-SEESSSS CS
  RmlD_sub_bind 125 YGrtKlaGEqavla.agkkalivRtswvygekg 156
                    Y  tK + Eqa+ +  + + + vR s +y+ + 
     EPX73530.1 170 YISTKREAEQAISNiPNIRSIFVRPSFMYDTHA 202
                    778**********966779999*******9875 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   7.6e-06      0.02       4      81 ..       4      79 ..       2      83 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 7.6e-06
                EEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHTTSEEEEEE-TTT.SHHHHHHHHHHHHHHHSSESEE CS
   adh_short  4 lvtGassGIGraiakelakeGakvvvvdrseekleevakelkeegakalaiqvDvt.dreevealvekavkklgkldvL 81
                +v G+s+ +G++i+k+ +++G++vv v+r+ +   + ++   e   k++  ++Dv  d +++  +   a + l ++ +L
  EPX73530.1  4 VVLGGSGFLGHNICKHAVAKGYQVVSVSRRGRGNIQFKEPWME---KVHWERADVMrDPHSLLPFAHGASAVLNTVGIL 79
                899************************9998776555555554...578888887767777766666666666666666 PP

>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   1.1e-05     0.029       2      37 ..       5      39 ..       4      58 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1.1e-05
                   EETTTSHHHHHHHHHHHHCT-CCEEEEEEESS-TTH CS
  GDP_Man_Dehyd  2 iTGiaGfiGsylaelLlekgyevhgivrrsssfntg 37
                   + G++Gf G +++++ ++kgy+v+ + rr    n++
     EPX73530.1  5 VLGGSGFLGHNICKHAVAKGYQVVSVSRRGR-GNIQ 39
                   78**********************9988754.3555 PP

>> 3Beta_HSD  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   2.5e-05     0.064       1      28 [.       4      30 ..       4      89 .. 0.63
   2 ?   -1.8   0.0      0.47   1.2e+03     146     160 ..     170     184 ..     166     214 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2.5e-05
   3Beta_HSD  1 vvtGgaGFlGralvkeLvrleelkevrv 28
                vv+Gg+GFlG++++k+ v  +  + v v
  EPX73530.1  4 VVLGGSGFLGHNICKHAVAKGY-QVVSV 30
                89**************999884.33333 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.47
   3Beta_HSD 146 ypesKalaEklvlka 160
                 y ++K+ aE+++ + 
  EPX73530.1 170 YISTKREAEQAISNI 184
                 788999999998654 PP

>> LpxI_N  LpxI N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   9.4e-05      0.24       1      43 [.       2      44 ..       2      57 .. 0.83
   2 ?   -2.5   0.0       1.7   4.3e+03      21      32 ..     148     159 ..     137     187 .. 0.49

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 9.4e-05
      LpxI_N  1 kigliAGsGrlPllvaeaakaagrevvvvalegeadeelekiv 43
                k+ ++ GsG l + ++++a a+g++vv v+ +g  + ++++  
  EPX73530.1  2 KLVVLGGSGFLGHNICKHAVAKGYQVVSVSRRGRGNIQFKEPW 44
                577899**************************99998888753 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.7
      LpxI_N  21 aagrevvvvale 32 
                 +a  +v+++   
  EPX73530.1 148 EAHVPVYCYISA 159
                 444444444332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (275 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       273  (0.0152267); expected 358.6 (0.02)
Passed bias filter:                      265  (0.0147805); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 1955.10
//
Query:       EPX73531.1  [L=294]
Description: AMP-activated protein kinase beta subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      2e-29  101.7   0.1    4.4e-29  100.5   0.0    1.6  2  AMPK1_CBM  Glycogen recognition site of AMP-activated protein
    4.7e-25   87.7   3.0    1.3e-24   86.3   3.0    1.8  1  AMPKBI     5'-AMP-activated protein kinase beta subunit, inte
  ------ inclusion threshold ------
       0.15   12.2   0.6       0.33   11.2   0.6    1.5  1  FNIP       FNIP Repeat


Domain annotation for each model (and alignments):
>> AMPK1_CBM  Glycogen recognition site of AMP-activated protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.5   0.0   7.3e-33   4.4e-29       1      82 [.      95     175 ..      95     178 .. 0.96
   2 ?   -3.2   0.0       1.7     1e+04      52      78 ..     236     262 ..     231     267 .. 0.71

  Alignments for each domain:
  == domain 1  score: 100.5 bits;  conditional E-value: 7.3e-33
   AMPK1_CBM   1 vptvikWkggGkkVyvtGsfnnWkkkipLkksekdfsvilkLpeGthqykFiVDgewrvdpdlptatdeeGnlnNvievkes 82 
                 vptv++W+ggG+ VyvtGsf++Wkkki+L k ++d++++l+L++Gt+++kF+VDg w++++d ptatd eGnl+N++ev+++
  EPX73531.1  95 VPTVLRWRGGGEIVYVTGSFSKWKKKIQLLK-TEDYTLVLQLRPGTQRFKFLVDGIWCCSSDFPTATDAEGNLYNYLEVEAN 175
                 79****************************6.58*********************************************976 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.7
   AMPK1_CBM  52 iVDgewrvdpdlptatdeeGnlnNvie 78 
                 i + +  +++d+ +  + +  + N + 
  EPX73531.1 236 ILNSNTAYKEDQSVLPNPNHVVLNHLA 262
                 666777788888888888888777765 PP

>> AMPKBI  5'-AMP-activated protein kinase beta subunit, interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.3   3.0   2.1e-28   1.3e-24       2      74 ..     222     290 ..     221     291 .. 0.97

  Alignments for each domain:
  == domain 1  score: 86.3 bits;  conditional E-value: 2.1e-28
      AMPKBI   2 lkeppklPphLekvllnkssdsaassaddssvlpiPnhvvLnHLltssikngvlavgcttRYrkKyvTtvlYk 74 
                 l++pp+lPphLek++ln+    ++  ++d+svlp PnhvvLnHL++ +++ gvla+++ttRY++KyvTt ++k
  EPX73531.1 222 LPKPPSLPPHLEKCILNS----NTAYKEDQSVLPNPNHVVLNHLAAANTQVGVLALSATTRYHRKYVTTAMFK 290
                 799***************....8899*********************************************97 PP

>> FNIP  FNIP Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.6   5.5e-05      0.33       7      34 ..     225     252 ..     223     253 .. 0.94

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 5.5e-05
        FNIP   7 igeLPsnleiLilgrdFnqkiligsLPn 34 
                 + +LP+ le++il+++   k  + +LPn
  EPX73531.1 225 PPSLPPHLEKCILNSNTAYKEDQSVLPN 252
                 568************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (294 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       437  (0.0243739); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.27s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2235.21
//
Query:       EPX73532.1  [L=344]
Description: pig-X [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-40  139.4   0.1    2.6e-40  138.6   0.1    1.4  1  PIG-X     PIG-X / PBN1


Domain annotation for each model (and alignments):
>> PIG-X  PIG-X / PBN1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.6   0.1   1.5e-44   2.6e-40       1     210 [.     140     332 ..     140     333 .. 0.87

  Alignments for each domain:
  == domain 1  score: 138.6 bits;  conditional E-value: 1.5e-44
       PIG-X   1 ptGlHptlqltvssaekslkppekeCklllyltlpssvfvDkYqLaeldelf....aelvvvsgevdLEaPeykvkewgsevllelatpkeekeeseee 95 
                 ptGlHp+l +++    ++lkpp+k+C+l  +l+lps++fvD+Y+L++++e+      + + ++ge+dLEaP+y+++  gs + +++    +e++++e +
  EPX73532.1 140 PTGLHPKLLVNL----TNLKPPNKHCTLRGVLRLPSTLFVDQYELSSMSEMSagnlDQILKIYGETDLEAPTYTLPGTGSILWFQVFL--NETARHEYN 232
                 79**********....899*******************************8899862699************************9977..89999**** PP

       PIG-X  96 wtvtlPlHlRYlapsseesgytevelpsPevfwaCeseaeegeklskspfdrknlgydglfgektvFyhlkpkpeseslvesievPvgdtsdaalVeig 194
                 ++++lPlH+RY+ p ++++ y+++ + sP+v+w C  +++ +  ++++p++        lf+     +++ p ++ + + ++i++P+++ ++++ V+++
  EPX73532.1 233 LQLELPLHTRYQLP-TKRDAYAKTIFYSPSVYWDC--SKK-KIPIEEEPLSHL------LFN-----RYVYPLKSIGPSNLTITIPTANVEHEQAVRWI 316
                 **************.8*******************..444.235666666555......444.....33344444444458****************** PP

       PIG-X 195 Tllvvllgflwvlwkl 210
                 T  v+l +f++v++ l
  EPX73532.1 317 TNTVILGMFFYVVSFL 332
                 ************9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (344 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       440  (0.0245412); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2625.19
//
Query:       EPX73533.1  [L=333]
Description: CAMKK/META protein kinase Ppk34 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-56  192.0   0.0    6.8e-52  176.4   0.0    2.0  2  Pkinase          Protein kinase domain
    2.7e-28   99.0   0.0    1.1e-27   97.0   0.0    1.7  2  Pkinase_Tyr      Protein tyrosine kinase
    4.1e-10   39.5   0.0    8.8e-10   38.4   0.0    1.4  1  Kinase-like      Kinase-like
    7.9e-07   28.2   0.0    0.00098   18.0   0.0    2.1  2  Pkinase_fungal   Fungal protein kinase
    8.7e-05   22.5   0.1    0.00015   21.7   0.1    1.4  1  APH              Phosphotransferase enzyme family
    0.00055   19.4   0.0    0.00092   18.6   0.0    1.3  1  Kdo              Lipopolysaccharide kinase (Kdo/WaaP) family
  ------ inclusion threshold ------
       0.04   12.9   0.0      0.084   11.8   0.0    1.5  1  Haspin_kinase    Haspin like kinase domain
       0.04   13.5   0.3       0.11   12.2   0.3    1.8  1  DUF1891          Domain of unknown function (DUF1891)
      0.041   13.5   0.0         11    5.6   0.0    2.3  2  FTA2             Kinetochore Sim4 complex subunit FTA2
      0.072   12.1   1.1      0.077   12.0   0.1    1.6  2  Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.0   1.5e-05     0.027       4      45 ..      43      84 ..      40      96 .. 0.87
   2 !  176.4   0.0   3.8e-55   6.8e-52      30     264 .]     104     331 ..      91     331 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.5e-05
                EEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHH CS
     Pkinase  4 leklGeGsfGkVykaveketgkivAvKkikkekakkkkekkv 45
                ++ +G Gs+++V  a+++ ++ ++A+K+++k+  + +k+ ++
  EPX73533.1 43 HSIIGYGSSSTVWLATKSPNNAEYAIKEFRKSFLRRQKRANL 84
                578****************************98888877555 PP

  == domain 2  score: 176.4 bits;  conditional E-value: 3.8e-55
                 EEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEE..SSEEEEEEE--TTEBHHHHHH..HHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS- CS
     Pkinase  30 KkikkekakkkkekkvlrEikilkklkhpnivrlyevfee..kdelylvleyveggeladlle..rkgslseeeakkiakqilegleylHskgiiHrDl 124
                 Kk+ ++++ +     +++E+ il+ l+hpniv+++ev+++   d l++vl+y++ g+la++ +  + ++++ee ++ +++q++++++y+H+k+++HrD+
  EPX73533.1 104 KKLHQDEQLDPFC-YIRTELDILQLLNHPNIVKIVEVINNeyMDMLLVVLNYCSSGKLASVDHgiTFSAFPEESCRIYFRQLVSSVDYIHRKNVVHRDI 201
                 5555555555554.899*********************997678999*************999877778****************************** PP

                 SGGGEEEETTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHH..TTSCB.SHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHC CS
     Pkinase 125 KpeNiLidekgelKitDFGlakelessskltsfvgtseYlAPEvl..keney.skkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkil 220
                 Kp+NiL+d  ++l ++DFGla+ l  +  ++ +  t+ ++APE+l   ++++ ++k D+Ws+Gv+ly l + k pfs   g++ +++++++        
  EPX73533.1 202 KPDNILLDAARNLCLIDFGLAEFLPPDGMVDVVSSTPAFMAPELLacPHQKVdGRKPDLWSMGVTLYVLAFAKLPFS---GNT-IAEMITN-------- 288
                 ****************************9****************99445555************************...444.2223333........ PP

                 TSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 221 getkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                   ++++l+ ++  se++++++kkll+k+p++R+ a+ell++p++
  EPX73533.1 289 -IKEKDLEIPNYASENLRNVIKKLLQKEPQRRINAQELLKDPFV 331
                 .456799999*******************************995 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.35   6.3e+02       6      51 ..      45      87 ..      42     111 .. 0.74
   2 !   97.0   0.0     6e-31   1.1e-27      45     257 ..     115     327 ..     101     328 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.35
                 EEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTS.SHHHHHHHHHH CS
  Pkinase_Tyr  6 klGeGafGkVvegtlkgekekkevkVavKtlkeea.teeekeellee 51
                  +G G+ ++V+ +t +     ++ + a+K ++++  +++++++ll+ 
   EPX73533.1 45 IIGYGSSSTVWLATKS----PNNAEYAIKEFRKSFlRRQKRANLLHT 87
                 6888899999988877....788889999996655144445566555 PP

  == domain 2  score: 97.0 bits;  conditional E-value: 6e-31
                  HHHHHHHHHHHHTS-BTTB--EEEEEE..SSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETT CS
  Pkinase_Tyr  45 keelleeakimkklkhpnivkllgvct..keepllivteyvkgGdLlkfLrkkekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenk 140
                     + +e++i++ l+hpnivk++ v+     + ll+v++y+++G+L +  +  + +++  ++   +  q+ + ++y+++k++vHrd+   N+Ll+  +
   EPX73533.1 115 FCYIRTELDILQLLNHPNIVKIVEVINneYMDMLLVVLNYCSSGKLASVDHGITFSAFPEESCRIYFRQLVSSVDYIHRKNVVHRDIKPDNILLDAAR 212
                  455678*********************433445999*************99998999999999999******************************** PP

                  EEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHH...HSEEEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHH CS
  Pkinase_Tyr 141 vvkisDfGLardiekddeyvkkeeaklpvkWmapEslk...ekkftsksDvWsfGvllwEiftlgespypglkneevleklkegkrlekpekcpeely 235
                     + DfGLa+ +  d              +mapE l    +k+   k D Ws Gv+l+ +  +++ p++g + +e+++++ke k le p++++e+l 
   EPX73533.1 213 NLCLIDFGLAEFLPPDGMVD---VVSSTPAFMAPELLAcphQKVDGRKPDLWSMGVTLYVL-AFAKLPFSGNTIAEMITNIKE-KDLEIPNYASENLR 305
                  *************4444443...33445689****99722144467899**********55.56****************986.579*********** PP

                  HHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 236 elmkkcweedpeeRptfselve 257
                  +++kk ++++p++R + +el++
   EPX73533.1 306 NVIKKLLQKEPQRRINAQELLK 327
                  ***************9999875 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.4   0.0   4.9e-13   8.8e-10     142     288 .]     174     319 ..     161     319 .. 0.82

  Alignments for each domain:
  == domain 1  score: 38.4 bits;  conditional E-value: 4.9e-13
  Kinase-like 142 etiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggf...taLvragtkvvlsevekgfaPpEllgsrggytrknktkmthkldaWql 236
                  e+ +r +   ql+  + +++ k +vh ++++dn+lld    l l +f   + L  +g   v+s+++ +f  pEll+      + ++     k d W +
   EPX73533.1 174 EESCRIYF-RQLVSSVDYIHRKNVVHRDIKPDNILLDAARNLCLIDFglaEFLPPDGMVDVVSSTP-AFMAPELLAC-----P-HQKVDGRKPDLWSM 263
                  56788888.79***********************************94444699999999988887.6778899998.....3.445567899***** PP

  Kinase-like 237 GlviyriwclklPltlat.eeakeew...kfklckkipekvkaLlkkfLqlsqedR 288
                  G++ y ++ +klP+   t  e++ +    +++  + ++e+++  +kk+Lq + ++R
   EPX73533.1 264 GVTLYVLAFAKLPFSGNTiAEMITNIkekDLEIPNYASENLRNVIKKLLQKEPQRR 319
                  **************8765234443333438888889**************988777 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.0   0.00054      0.96     141     229 ..      35     126 ..      17     163 .. 0.82
   2 !   18.0   0.0   5.5e-07   0.00098     323     394 ..     192     253 ..     180     273 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00054
  Pkinase_fungal 141 leleeplarqraivgRgTtcwrarkegergkeyvvKdsWrdaerk.sEaelLkkaee.rgvegvarlvahedve..ekdddiaeiRkgldvtk 229
                     ++++e +a++    g + t+w a+k+ ++  ey +K   ++  r+ + a+lL+ +++ +g +++ r+  +++++  e+ d + +iR +ld+ +
      EPX73533.1  35 FTINEYFAHSIIGYGSSSTVWLATKSPNN-AEYAIKEFRKSFLRRqKRANLLHTVSKqSGRTHLDRISLEKKLHqdEQLDPFCYIRTELDILQ 126
                     666677766665567778*******9777.79*****99998776699******96516789**********999888888899999998765 PP

  == domain 2  score: 18.0 bits;  conditional E-value: 5.5e-07
  Pkinase_fungal 323 flkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlkgeeHsyr 394
                     +  ++++HrDi  +Nil+      + r+  LiD+ la  l  d + +       T++Fma e+l  + H+ +
      EPX73533.1 192 H-RKNVVHRDIKPDNILLD-----AARNLCLIDFGLAEFLPPDGMVD---VVSSTPAFMAPELLA-CPHQKV 253
                     5.789*************9.....78999************755555...4899********999.667755 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.1   8.6e-08   0.00015     166     201 ..     194     227 ..     181     256 .. 0.86

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 8.6e-08
                 EEEE-SS-SGGGEEEC..TTEEEEE---TT-EEEEC CS
         APH 166 tvllHgDlhpgNllvdpddgrvtGviDfedaglgpp 201
                 + ++H+D++p+N+l+d++ +   ++iDf++a   pp
  EPX73533.1 194 KNVVHRDIKPDNILLDAARNL--CLIDFGLAEFLPP 227
                 5689************55444..6******977665 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0   5.1e-07   0.00092     117     166 ..     174     219 ..     161     224 .. 0.86

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 5.1e-07
         Kdo 117 eelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDl 166
                 ee+ r  ++++   +  +hr +v H+d+ + nill+++     +++liD+
  EPX73533.1 174 EESCRIYFRQLVSSVDYIHRKNVVHRDIKPDNILLDAAR----NLCLIDF 219
                 56666677888889999*********************9....******9 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   4.7e-05     0.084     230     255 ..     198     223 ..     175     235 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 4.7e-05
  Haspin_kinase 230 HRdLhldniLvdknlnvtlidlklsR 255
                    HRd++ dniL+d++ n  lid+ l+ 
     EPX73533.1 198 HRDIKPDNILLDAARNLCLIDFGLAE 223
                    **********************9986 PP

>> DUF1891  Domain of unknown function (DUF1891)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.3   5.9e-05      0.11      15      27 ..      72      84 ..      70      93 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 5.9e-05
                XXXXXXXXXXXSS CS
     DUF1891 15 RlyFLRkLkKanl 27
                R+ FLR++k+anl
  EPX73533.1 72 RKSFLRRQKRANL 84
                899*********9 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.0    0.0063        11      28      63 ..      44      90 ..      19     116 .. 0.65
   2 ?    5.6   0.0    0.0059        11     177     204 ..     180     207 ..     168     222 .. 0.82

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0063
        FTA2 28 eyLgkglhsiVlkvki..rgkeYALKlFrfleaeele.........e 63
                +++g g +s V+ +    ++ eYA+K Fr+   + ++         +
  EPX73533.1 44 SIIGYGSSSTVWLATKspNNAEYAIKEFRKSFLRRQKranllhtvsK 90
                455889999999997522567*******9997766655555444331 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.0059
        FTA2 177 qlpkllrdlkklhklgIvvrDlkeenyi 204
                 ++++l++ ++ +h+  +v+rD+k++n++
  EPX73533.1 180 YFRQLVSSVDYIHRKNVVHRDIKPDNIL 207
                 68999********************986 PP

>> Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.1       2.5   4.5e+03     181     205 ..      62      86 ..      57      90 .. 0.61
   2 ?   12.0   0.1   4.3e-05     0.077     295     316 ..     191     212 ..     120     225 .. 0.79

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 2.5
  Pox_ser-thr_kin 181 nitklskkkllkifeekkdeekfvk 205
                      n+ +++ k++ k+f  +++ +++++
       EPX73533.1  62 NNAEYAIKEFRKSFLRRQKRANLLH 86 
                      4557777777777776655555554 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 4.3e-05
  Pox_ser-thr_kin 295 pdcenflhvDlkPdniLifdsk 316
                        ++n +h D+kPdniL+  ++
       EPX73533.1 191 IHRKNVVHRDIKPDNILLDAAR 212
                      4689*************85544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (333 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       715  (0.0398795); expected 358.6 (0.02)
Passed bias filter:                      585  (0.0326287); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 2273.51
//
Query:       EPX73534.1  [L=177]
Description: nucleoside-triphosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.6e-26   91.6   0.1    1.1e-25   90.6   0.0    1.5  1  AAA_18           AAA domain
    5.9e-07   29.7   0.0    3.5e-05   24.0   0.0    2.2  2  AAA_33           AAA domain
    4.2e-06   27.2   0.2      6e-05   23.5   0.0    2.2  2  AAA_17           AAA domain
    1.7e-05   25.3   0.7     0.0001   22.7   0.7    2.0  1  AAA              ATPase family associated with various cellul
    2.3e-05   24.7   0.0    6.2e-05   23.3   0.0    1.7  2  AAA_28           AAA domain
    0.00034   20.9   0.1     0.0011   19.2   0.0    1.8  2  AAA_22           AAA domain
    0.00057   19.4   0.0    0.00082   18.9   0.0    1.2  1  KTI12            Chromatin associated protein KTI12
    0.00066   19.7   0.1     0.0015   18.6   0.0    1.6  1  AAA_5            AAA domain (dynein-related subfamily)
    0.00079   19.6   0.0     0.0056   16.8   0.0    2.1  2  ADK              Adenylate kinase
    0.00083   19.8   0.0    0.00088   19.7   0.0    1.5  1  AAA_16           AAA ATPase domain
     0.0013   18.6   0.0      0.011   15.6   0.0    2.0  2  NTPase_1         NTPase
     0.0022   17.9   0.1     0.0057   16.5   0.0    1.7  2  MobB             Molybdopterin guanine dinucleotide synthesis
     0.0026   18.1   0.0      0.012   16.0   0.0    2.0  2  RNA_helicase     RNA helicase
      0.003   16.9   0.2      0.059   12.7   0.0    2.1  2  ATPase           KaiC
     0.0042   16.8   0.0     0.0083   15.9   0.0    1.4  1  IstB_IS21        IstB-like ATP binding protein
  ------ inclusion threshold ------
       0.01   15.6   0.0      0.017   14.9   0.0    1.3  1  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
      0.011   15.6   0.0      0.026   14.4   0.0    1.6  1  NACHT            NACHT domain
      0.013   15.1   0.1      0.034   13.7   0.0    1.7  2  AAA_25           AAA domain
      0.014   14.8   0.0      0.022   14.1   0.0    1.2  1  Mg_chelatase     Magnesium chelatase, subunit ChlI
      0.015   15.0   0.0      0.026   14.3   0.0    1.4  1  AAA_24           AAA domain
      0.017   15.1   0.0      0.043   13.8   0.0    1.6  2  AAA_14           AAA domain
      0.023   14.4   0.1        2.7    7.7   0.0    2.1  2  Thymidylate_kin  Thymidylate kinase
       0.03   14.2   0.1          2    8.3   0.0    2.3  2  dNK              Deoxynucleoside kinase
       0.03   13.5   0.1      0.083   12.1   0.0    1.7  2  NB-ARC           NB-ARC domain
      0.031   14.3   0.7      0.067   13.2   0.1    1.9  2  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
      0.035   13.7   0.0      0.055   13.1   0.0    1.4  1  cobW             CobW/HypB/UreG, nucleotide-binding domain
      0.045   12.8   0.0      0.091   11.8   0.0    1.4  1  Parvo_NS1        Parvovirus non-structural protein NS1
      0.047   13.0   0.0      0.096   12.0   0.0    1.5  1  Zeta_toxin       Zeta toxin
      0.058   12.7   0.0       0.11   11.8   0.0    1.5  1  FtsK_SpoIIIE     FtsK/SpoIIIE family
      0.072   13.4   1.0       0.34   11.2   0.2    2.3  3  AAA_19           AAA domain
      0.072   12.8   0.1       0.17   11.6   0.0    1.6  2  PduV-EutP        Ethanolamine utilisation - propanediol utili
      0.073   12.9   0.0       0.11   12.3   0.0    1.2  1  malic            Malic enzyme, N-terminal domain
      0.078   12.1   0.0       0.11   11.5   0.0    1.3  1  MCM              MCM P-loop domain
      0.093   12.4   0.0       0.15   11.6   0.0    1.3  1  SRP54            SRP54-type protein, GTPase domain
       0.12   12.1   0.0       0.22   11.2   0.0    1.4  1  AAA_30           AAA domain
       0.19   11.6   0.0       0.68    9.8   0.0    1.8  2  RsgA_GTPase      RsgA GTPase
        0.2   11.2   0.0       0.32   10.5   0.0    1.3  1  AAA_7            P-loop containing dynein motor region


Domain annotation for each model (and alignments):
>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.6   0.0   2.4e-28   1.1e-25       1     130 []      11     131 ..      11     131 .. 0.93

  Alignments for each domain:
  == domain 1  score: 90.6 bits;  conditional E-value: 2.4e-28
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf.gvnlrdvakenglllevdpealdeskrldedkldklldaleenssaleegknlvidghlaeleseaakdikkvv 98 
                 I+l+GtpG+GKttla+ L++  ++ +   + ++ke++l +++d++   ++  +de+k   +ld le         + +++d+h +  ++e+++d+  +v
  EPX73534.1  11 IILCGTPGTGKTTLAEQLADASELeHLCMGTIVKEHHLHFGFDEK--WQTYDVDEEK---VLDYLEPRLL----KGGCIVDWHTCGIFPEELIDLA-IV 99 
                 9*****************7776667********************..8899999888...8888888655....5778******************.** PP

      AAA_18  99 LtaspeelleRlekRgyeeakikeneeaeild 130
                 L+++ ++l+eRle+Rgy+ +ki+en+eaei++
  EPX73534.1 100 LRTDHSKLWERLEARGYSLHKIQENNEAEIMQ 131
                 *****************************996 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.0   7.1e-08   3.5e-05       2      29 ..      11      38 ..      11      82 .. 0.80
   2 ?    4.0   0.0      0.11        52      99     125 ..      95     121 ..      85     143 .. 0.78

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 7.1e-08
      AAA_33  2 vllvGlpGsGKstlaerllkklgavlls 29
                ++l+G pG+GK+tlae+l+ +   ++l 
  EPX73534.1 11 IILCGTPGTGKTTLAEQLADASELEHLC 38
                799***************9998877764 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.11
      AAA_33  99 vrivvvetdeetlkeRlakRaangddr 125
                 ++++v++td ++l eRl++R  +  + 
  EPX73534.1  95 DLAIVLRTDHSKLWERLEARGYSLHKI 121
                 57899***************9865444 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.0   1.2e-07     6e-05       2      39 ..      15      52 ..      14     118 .. 0.76
   2 ?    1.4   0.1       0.8   3.9e+02      84     112 ..     125     153 ..     119     167 .. 0.77

  Alignments for each domain:
  == domain 1  score: 23.5 bits;  conditional E-value: 1.2e-07
                E-TTSSHHHHHHHHHHHHTEEEEEHHHHHHHHHHTTTS CS
      AAA_17  2 GgPGsGKgtqceklvekygfthlsaGdllreeakrggl 39
                G PG GK+t++e+l++  +++hl +G ++ e   + g 
  EPX73534.1 15 GTPGTGKTTLAEQLADASELEHLCMGTIVKEHHLHFGF 52
                99**************************9987655555 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.8
                 ETTEEEESSHHHHHHHH..SEEEEEE--H CS
      AAA_17  84 eqagfldglpkevleelkpdaiilleadp 112
                 ++a++++   +ev e+++p++i+ le + 
  EPX73534.1 125 NEAEIMQICLEEVRESFDPKIIVELESNS 153
                 56777888999999999999999998765 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.7   2.1e-07    0.0001       1      25 [.      11      35 ..      11     176 .. 0.54

  Alignments for each domain:
  == domain 1  score: 22.7 bits;  conditional E-value: 2.1e-07
                EEEESSTTSSHHHHHHHHHHHHTHE CS
         AAA  1 vllyGppGtGKTllakavakelgve 25
                ++l+G+pGtGKT+la+++a  ++ e
  EPX73534.1 11 IILCGTPGTGKTTLAEQLADASELE 35
                689****************996544 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.0   1.3e-07   6.2e-05       1      23 [.      10      35 ..      10      76 .. 0.73
   2 ?   -1.7   0.0       6.1   2.9e+03      14      27 ..     106     119 ..     103     139 .. 0.69

  Alignments for each domain:
  == domain 1  score: 23.3 bits;  conditional E-value: 1.3e-07
      AAA_28  1 kivitGgestGKTtlleaLaar...g 23
                +i++ G+++tGKTtl+e+La+    +
  EPX73534.1 10 NIILCGTPGTGKTTLAEQLADAselE 35
                599*****************543332 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 6.1
      AAA_28  14 tlleaLaargypvv 27 
                  l e+L+argy+ +
  EPX73534.1 106 KLWERLEARGYSLH 119
                 45666777766654 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   2.3e-06    0.0011       8      29 ..      11      32 ..       5      53 .. 0.87
   2 ?   -0.9   0.0       3.9   1.9e+03      70      94 ..     117     144 ..      99     170 .. 0.62

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 2.3e-06
      AAA_22  8 lvvtGesGtGKTtllrrlleql 29
                ++++G +GtGKTtl+++l++  
  EPX73534.1 11 IILCGTPGTGKTTLAEQLADAS 32
                89****************9875 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 3.9
      AAA_22  70 a....erlsseellealeqalraraviel 94 
                 +    +++++ e+++ + + +r+ ++ + 
  EPX73534.1 117 SlhkiQENNEAEIMQICLEEVRESFD-PK 144
                 34444566666666666666666665.32 PP

>> KTI12  Chromatin associated protein KTI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   1.7e-06   0.00082       2      41 ..       9      49 ..       8      68 .. 0.70

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 1.7e-06
                .EEEEE--TTSSHHHHHHHHHHHHHHTT--E.EEE-THHHH CS
       KTI12  2 pLvvltGlPssGKstrakeLakaleeekrsv.vviddeslg 41
                p ++l+G P +GK+t+a++La+a e e+  + +++++  l+
  EPX73534.1  9 PNIILCGTPGTGKTTLAEQLADASELEHLCMgTIVKEHHLH 49
                679******************98776544331455555555 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0     3e-06    0.0015       1      22 [.      10      31 ..      10      41 .. 0.89

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 3e-06
                EEEEE--SSSSHHHHHHHGGGG CS
       AAA_5  1 dvlLvGppGtgKselaerlaaa 22
                +++L G pGtgK++lae+la a
  EPX73534.1 10 NIILCGTPGTGKTTLAEQLADA 31
                689****************987 PP

>> ADK  Adenylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   1.1e-05    0.0056       1      34 [.      13      46 ..      13      71 .. 0.93
   2 ?    0.5   0.0       1.2   5.7e+02     103     123 ..      94     155 ..      90     173 .. 0.62

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 1.1e-05
                EEESTTSSHHHHHHHHHHHHTSEEEEHHHHHHHH CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         ADK  1 llGaPgaGKGtqaeklvkkyglahlstGdllRae 34
                l G+Pg+GK t ae+l++  +l hl  G +++++
  EPX73534.1 13 LCGTPGTGKTTLAEQLADASELEHLCMGTIVKEH 46
                68**************************998875 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 1.2
                 ESEEEEEE--HHHHHHHHHT.........................................G CS
                 xxxxxxxxxxxxxxxxxxxx.........................................x RF
         ADK 103 ldlvleldvpeevlveRltg.........................................D 123
                 +dl + l+ +++ l eRl                                           D
  EPX73534.1  94 IDLAIVLRTDHSKLWERLEArgyslhkiqenneaeimqicleevresfdpkiivelesnstD 155
                 57777888888888888887778888888775555555555555555555555555555554 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   1.8e-06   0.00088      22      51 ..       5      35 ..       1     170 [. 0.85

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 1.8e-06
      AAA_16 22 grp.elvllsGesGvGKsslvrellralekd 51
                +r+ ++++l G +G+GK++l+++l++a e +
  EPX73534.1  5 HRSlPNIILCGTPGTGKTTLAEQLADASELE 35
                455599*******************876655 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   2.3e-05     0.011       1      38 [.      10      46 ..      10      73 .. 0.76
   2 ?    0.9   0.0      0.75   3.6e+02     130     165 ..      97     131 ..      88     146 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 2.3e-05
                EEEEE--TTSSHHHHHHHHHHHH...GGGEEEEEEEEE CS
    NTPase_1  1 kvfiTGppGvGKtTlvkkvlellkssgvkvgGfyteev 38
                ++++ G pG+GKtTl ++++++ +  +    G +++e+
  EPX73534.1 10 NIILCGTPGTGKTTLAEQLADASE-LEHLCMGTIVKEH 46
                699****************99874.4455566666655 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.75
                 EE--SS--SHHHHHHHT-TT-EEEE--TTTTTTHHH CS
    NTPase_1 130 avihrrkdlalveeirerkdvkvfevteenrdalle 165
                 a++ r+++++l e+++ r + ++++++e+n  ++++
  EPX73534.1  97 AIVLRTDHSKLWERLEAR-GYSLHKIQENNEAEIMQ 131
                 555555567777777776.67777787777766655 PP

>> MobB  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   1.2e-05    0.0057       2      44 ..      11      54 ..      10      61 .. 0.83
   2 ?   -1.7   0.0       5.1   2.5e+03      21      37 ..     109     125 ..     104     166 .. 0.67

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 1.2e-05
        MobB  2 lgivgksgsGKTtLleklipelkarglrvgti.Khahhgfdvdk 44
                + ++g+ g+GKTtL e+l  + + + l +gti K +h +f +d+
  EPX73534.1 11 IILCGTPGTGKTTLAEQLADASELEHLCMGTIvKEHHLHFGFDE 54
                5689*************************997255555666665 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 5.1
        MobB  21 pelkarglrvgtiKhah 37 
                 + l+arg+++  i  ++
  EPX73534.1 109 ERLEARGYSLHKIQENN 125
                 55666666655554433 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   2.4e-05     0.012       1      23 [.      11      33 ..      11      68 .. 0.69
   2 ?   -0.6   0.0       3.6   1.7e+03      78     102 ..     123     147 ..     117     165 .. 0.76

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 2.4e-05
  RNA_helicase  1 iwlyGpsgeGKStlakeLakall 23
                  i+l+G +g+GK+tla++La+a +
    EPX73534.1 11 IILCGTPGTGKTTLAEQLADASE 33
                  789**************998866 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 3.6
  RNA_helicase  78 sstpyplnmasleekgtlftSkvvi 102
                   ++++ ++    lee + +f++k+++
    EPX73534.1 123 ENNEAEIMQICLEEVRESFDPKIIV 147
                   5666777777777777888888775 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   0.0   0.00012     0.059      22      40 ..      11      29 ..       6      68 .. 0.82
   2 ?    2.4   0.2      0.17        81      58     121 ..     102     174 ..      95     177 .] 0.77

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 0.00012
      ATPase 22 vlitGepGtGKtifalqFl 40
                + ++G+pGtGKt++a+q +
  EPX73534.1 11 IILCGTPGTGKTTLAEQLA 29
                7899************965 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.17
      ATPase  58 epaedlrenakslGwdlekleeegklaiidasesaeesaee.........kdkedleelieelaeaikeikak 121
                  + ++l e+ ++ G  l+k++e+++  i+++  ++ +++ +         ++++d+e+ +++l + i++ k+ 
  EPX73534.1 102 TDHSKLWERLEARGYSLHKIQENNEAEIMQICLEEVRESFDpkiivelesNSTDDMESNMSRLLQWIDTWKED 174
                 5667899999999999999999999999888877776555567778887777888888888888888777765 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   1.7e-05    0.0083      49      70 ..      10      31 ..       5      37 .. 0.89

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 1.7e-05
   IstB_IS21 49 nivllGpsGvGKshlaialgve 70
                ni+l+G +G+GK+ la  l+ +
  EPX73534.1 10 NIILCGTPGTGKTTLAEQLADA 31
                9***************999865 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.0   3.5e-05     0.017      31      56 ..       6      31 ..       2      47 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 3.5e-05
      RuvB_N 31 ealdhvllyGpPGlGkttlakiiake 56
                ++l  ++l+G PG Gkttla+ +a+ 
  EPX73534.1  6 RSLPNIILCGTPGTGKTTLAEQLADA 31
                577889**************999864 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   5.4e-05     0.026       3      25 ..      11      33 ..      10      49 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 5.4e-05
                EEEEC-TTTCHHHHHHHHHHHHC CS
       NACHT  3 vilqGeaGsGKTtLlqklalawa 25
                +il G +G GKTtL+++la+a  
  EPX73534.1 11 IILCGTPGTGKTTLAEQLADASE 33
                7899**************99865 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0     7e-05     0.034      36      55 ..      11      30 ..      10      47 .. 0.90
   2 ?   -2.9   0.0       8.6   4.1e+03     154     173 ..     118     138 ..     116     144 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 7e-05
      AAA_25 36 allaGapgtGKttlaldlal 55
                ++l+G pgtGKttla +la 
  EPX73534.1 11 IILCGTPGTGKTTLAEQLAD 30
                69*************99996 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 8.6
      AAA_25 154 alggdensnsdv.galveale 173
                 ++  +en+++++ + ++e ++
  EPX73534.1 118 LHKIQENNEAEImQICLEEVR 138
                 567788888886576666655 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   4.6e-05     0.022      24      43 ..      10      29 ..       6      44 .. 0.91

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 4.6e-05
  Mg_chelatase 24 nlllvGppGsGKtmlakrlp 43
                  n++l+G+pG+GKt la++l+
    EPX73534.1 10 NIILCGTPGTGKTTLAEQLA 29
                  89**************9986 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   5.3e-05     0.026       4      22 ..      10      28 ..       8      71 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 5.3e-05
      AAA_24  4 kiliyGpsgiGKTtlakel 22
                +i++ G +g+GKTtla +l
  EPX73534.1 10 NIILCGTPGTGKTTLAEQL 28
                799**************99 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0     9e-05     0.043       5      59 ..      11      73 ..       8      88 .. 0.84
   2 ?   -2.1   0.0       7.3   3.6e+03      36      42 ..     132     138 ..     115     167 .. 0.52

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 9e-05
      AAA_14  5 lvitGaRrvGKTtllkqlikell........vkkesilyinldderdkkladpekllelilek 59
                +++ G   +GKTtl++ql++ +         + ke+ l + +d++ ++   d+ek+l+++  +
  EPX73534.1 11 IILCGTPGTGKTTLAEQLADASElehlcmgtIVKEHHLHFGFDEKWQTYDVDEEKVLDYLEPR 73
                68889999**********9887788999***999**********9887777777888887655 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 7.3
      AAA_14  36 inldder 42 
                 i l++ r
  EPX73534.1 132 ICLEEVR 138
                 3222222 PP

>> Thymidylate_kin  Thymidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0     0.039        19       3      20 ..      15      32 ..      14      46 .. 0.83
   2 ?    7.7   0.0    0.0055       2.7     119     182 ..      95     158 ..      76     161 .. 0.79

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.039
                     ESTTSSHHHHHHHHHHHH CS
  Thymidylate_kin  3 GlDGaGKttqaellkerl 20
                     G  G+GKtt ae l+++ 
       EPX73534.1 15 GTPGTGKTTLAEQLADAS 32
                     6669**********9865 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.0055
                      SEEEEEESSHHHHHTSCCTTSSTTTSHHHHHHHHHHHHHHHHHHHH.TTSTEEEEETTS-HHHHH CS
  Thymidylate_kin 119 dltflldvdpevalkRlakrdeldeeeeeqldflrkvrerylelak.ederiliidasksieevh 182
                      dl + l +d ++  +Rl++r+ + ++++e+ +  + ++ ++ e+ + +d +i++   s+s+++++
       EPX73534.1  95 DLAIVLRTDHSKLWERLEARGYSLHKIQENNE-AEIMQICLEEVREsFDPKIIVELESNSTDDME 158
                      9999******************8888888888.56667767777779999999998888888776 PP

>> dNK  Deoxynucleoside kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.0     0.004         2       3      26 ..      13      36 ..      11      71 .. 0.87
   2 ?    4.1   0.1     0.073        35     123     154 ..      94     124 ..      79     171 .. 0.62

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.004
                EEESTTSSHHHHHHHHHCCSTCEE CS
         dNK  3 veGnIgaGKstlvklLskklgvkv 26
                + G+ g GK+tl+++L+++ + ++
  EPX73534.1 13 LCGTPGTGKTTLAEQLADASELEH 36
                56888************9998766 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.073
                 -SEEEEEE--HHHHHHHHHHCTTCCCTTS-HH CS
         dNK 123 pdlliYLkasletclerikkRgreeekkield 154
                 +dl i L+++  ++ er++ Rg +  k i+++
  EPX73534.1  94 IDLAIVLRTDHSKLWERLEARGYSLHK-IQEN 124
                 799999***************987744.3333 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00017     0.083      23      49 ..      11      36 ..       2      44 .. 0.84
   2 ?   -1.4   0.1       2.2     1e+03     218     240 ..     135     158 ..     103     168 .. 0.60

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00017
                EEEEESTTSSHHHHHHHHCCSHCCCCC CS
      NB-ARC 23 valvGmgGvGKttlakqilnksdeveg 49
                + l G +G GKttla+q     +e+e+
  EPX73534.1 11 IILCGTPGTGKTTLAEQLADA-SELEH 36
                7799*************9887.77776 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 2.2
                 HHHHHHHHCTGCC.TS--SSSSSS CS
      NB-ARC 218 kkvleklesklle.vekstsksle 240
                 ++v e++++k ++ +e+++++++e
  EPX73534.1 135 EEVRESFDPKIIVeLESNSTDDME 158
                 344455555555545555555444 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   0.00014     0.067      22     102 ..      11      86 ..       2     110 .. 0.65
   2 ?   -1.9   0.1       6.7   3.2e+03      77     102 ..     126     152 ..     116     167 .. 0.54

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 0.00014
                 EEEEESTTSSHHHHHHHHHHHTT------TTTTSEEEEEE..SSEEEEE-TT-SSTHHHHHCTTCCCCSTS...CEEEEETGGG CS
        TsaE  22 ilLeGdLGaGKTtlvrglakalgveevkSPTFtlveeYelekeglyHfDlYRledeeeleelgleeyleee...avvlvEWpek 102
                 i+L G  G+GKTtl+ +la a ++e+      t+v+e++l      Hf +    ++ +++e ++ +yle +   + ++v W   
  EPX73534.1  11 IILCGTPGTGKTTLAEQLADASELEHLCMG--TIVKEHHL------HFGFDEKWQTYDVDEEKVLDYLEPRllkGGCIVDWHTC 86 
                 89******************9988855444..47777743......55555544455555555555554323435677777665 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 6.7
                 THHHHHCTTCCCCS.TSCEEEEETGGG CS
        TsaE  77 eeeleelgleeyle.eeavvlvEWpek 102
                 e+e+ ++ lee+ e  +  ++vE  ++
  EPX73534.1 126 EAEIMQICLEEVREsFDPKIIVELESN 152
                 444555555555432223555555554 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   0.00011     0.055       2      35 ..      10      45 ..       9      80 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 0.00011
                EEEEEESTTCCHHHHHHHHH..CT--SS-EEEEESS CS
        cobW  2 vtvltGflGsGKTtLlnhll..enraglklavivNe 35
                 ++l+G +G+GKTtL ++l   ++ ++l +  iv e
  EPX73534.1 10 NIILCGTPGTGKTTLAEQLAdaSELEHLCMGTIVKE 45
                589***************996555556666666655 PP

>> Parvo_NS1  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00019     0.091     117     139 ..      11      33 ..       5      38 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00019
   Parvo_NS1 117 vwfyGpantGktnlaeaIakavp 139
                 + ++G++ tGkt lae++a a+ 
  EPX73534.1  11 IILCGTPGTGKTTLAEQLADASE 33 
                 789****************9986 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0    0.0002     0.096      19      40 ..      11      32 ..       2      43 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.0002
  Zeta_toxin 19 illgGqpGAGKselaellkdel 40
                i+l G pG GK++lae l+d+ 
  EPX73534.1 11 IILCGTPGTGKTTLAEQLADAS 32
                789**************99986 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00023      0.11      33      56 ..       3      25 ..       1      29 [. 0.82

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00023
                  EEGGGS-.SEEEE--TTSSHHHHH CS
  FtsK_SpoIIIE 33 ldlkkmashllvaGatgsGKStal 56
                  ++ ++ + +++++G++g+GK+t  
    EPX73534.1  3 TEHRSLP-NIILCGTPGTGKTTLA 25
                  5667888.*************975 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.2    0.0007      0.34      11      30 ..       9      28 ..       3      43 .. 0.81
   2 ?   -0.7   0.0       3.4   1.7e+03     103     123 ..      55      76 ..      31      84 .. 0.78
   3 ?   -1.2   0.0       4.8   2.3e+03      31      67 ..     130     166 ..     104     173 .. 0.57

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.0007
      AAA_19 11 kvllvtaGpGtGKTrvlkhi 30
                +++++ + pGtGKT++ ++ 
  EPX73534.1  9 PNIILCGTPGTGKTTLAEQL 28
                57899*********986654 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 3.4
      AAA_19 103 ee.llivDEfqdvdelqyrLlk 123
                 ++ +  vDE   +d l+ rLlk
  EPX73534.1  55 KWqTYDVDEEKVLDYLEPRLLK 76 
                 4556669999999999999997 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 4.8
      AAA_19  31 vallvelggvkpeeillvaftgrAakelrerlaalga 67 
                 +++++e+ +++ ++ ++v + + +++ ++ +++ l++
  EPX73534.1 130 MQICLEEVRESFDPKIIVELESNSTDDMESNMSRLLQ 166
                 3334444444444455555555555555555555444 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00035      0.17       3      23 ..      10      30 ..       8      42 .. 0.87
   2 ?   -2.5   0.0       8.3     4e+03      51      74 ..     114     137 ..     109     146 .. 0.65

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00035
   PduV-EutP  3 killiGkvgsGKttLtqalkg 23
                +i+l G+ g+GKttL+++l +
  EPX73534.1 10 NIILCGTPGTGKTTLAEQLAD 30
                69***************9987 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 8.3
   PduV-EutP  51 rklysalivtsaeadvialvqdat 74 
                 r ++   i    ea+++ ++++ +
  EPX73534.1 114 RGYSLHKIQENNEAEIMQICLEEV 137
                 555555556667888888887654 PP

>> malic  Malic enzyme, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   0.00022      0.11     103     169 ..      86     152 ..      78     165 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00022
                 HS-EGGGEEEEEECS-BS.HHHHC.TT..S.SSB...SHHHHHHHHHHHHHHHHHHGCTSEEEE-S- CS
       malic 103 agidPekvlpvvldvgtnneelledplYlGlrkkRvkgeeydefvdefveavkelfppkaliqfEDf 169
                  gi Pe+++++++  +t++++l e     G   +++++++  e+++ ++e v+e f+pk+++++E  
  EPX73534.1  86 CGIFPEELIDLAIVLRTDHSKLWERLEARGYSLHKIQENNEAEIMQICLEEVRESFDPKIIVELESN 152
                 799*************************************************************965 PP

>> MCM  MCM P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00024      0.11      53      93 ..       4      44 ..       1      59 [. 0.83

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00024
                BBCSS-EEEEEESSTSTHHHHHHHHHHHSSSEEEEESSSSS CS
         MCM 53 klrgdinvllvgdpgtaKsqlLkyveklapravytsgkgss 93
                + r+  n++l+g pgt+K++l +++++ ++      g+  +
  EPX73534.1  4 EHRSLPNIILCGTPGTGKTTLAEQLADASELEHLCMGTIVK 44
                578899***************99999988877777766655 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00032      0.15       4      28 ..      11      35 ..       9      43 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00032
                EEEEESTTSSHHHHHHHHHHHHHHT CS
       SRP54  4 illvGlqGaGKTttlaKLaallkke 28
                i+l+G+ G+GKTt + +La+  + e
  EPX73534.1 11 IILCGTPGTGKTTLAEQLADASELE 35
                899****************987655 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00045      0.22      22      43 ..      12      33 ..       3      43 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00045
      AAA_30 22 vltGpAGtGKttalkalreawe 43
                +l G +GtGKtt+ ++l++a e
  EPX73534.1 12 ILCGTPGTGKTTLAEQLADASE 33
                788************9998876 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0    0.0014      0.68     102     125 ..      11      34 ..       4      47 .. 0.86
   2 ?   -1.2   0.0       3.4   1.6e+03      66      93 ..     105     132 ..      94     147 .. 0.73

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.0014
                  EEEECSTTSSHHHHHHHHCTT--- CS
  RsgA_GTPase 102 svlvGqSGvGKStLinallpelel 125
                  ++l+G  G GK+tL ++l+   el
   EPX73534.1  11 IILCGTPGTGKTTLAEQLADASEL 34 
                  689***************987655 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 3.4
                  HHHHHHHHHTTSEEEE--TTTHTTHHHH CS
  RsgA_GTPase  66 eelkeelealgyevllvsaktkegleel 93 
                  ++l e+lea gy++ ++++++++++ ++
   EPX73534.1 105 SKLWERLEARGYSLHKIQENNEAEIMQI 132
                  5667788888999888888877666544 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00065      0.32      35      59 ..      10      34 ..       3      45 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00065
       AAA_7 35 pvllvGptGtGKtviikdllkkldk 59
                +++l+G+ GtGKt+++++l ++ + 
  EPX73534.1 10 NIILCGTPGTGKTTLAEQLADASEL 34
                689*************998877664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       716  (0.0399353); expected 358.6 (0.02)
Passed bias filter:                      567  (0.0316247); expected 358.6 (0.02)
Passed Vit filter:                       135  (0.0075297); expected 17.9 (0.001)
Passed Fwd filter:                        37  (0.0020637); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              37  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 1192.40
//
Query:       EPX73535.1  [L=689]
Description: inner membrane I-AAA protease complex subunit Yme1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.3e-61  205.6   0.4    1.2e-60  204.7   0.4    1.5  1  Peptidase_M41    Peptidase family M41
    1.5e-41  141.9   0.0    2.9e-41  141.0   0.0    1.5  1  AAA              ATPase family associated with various cellul
    3.6e-08   33.1   0.5    1.5e-07   31.1   0.0    2.1  2  AAA_lid_3        AAA+ lid domain
    4.6e-06   27.1   1.8    0.00062   20.2   0.0    3.0  3  AAA_16           AAA ATPase domain
    5.1e-06   26.5   0.1    3.2e-05   24.0   0.0    2.4  2  AAA_5            AAA domain (dynein-related subfamily)
    1.4e-05   25.4   0.2      0.013   15.8   0.0    2.8  2  AAA_22           AAA domain
    1.8e-05   24.1   0.0    4.1e-05   23.0   0.0    1.6  1  TIP49            TIP49 P-loop domain
    0.00051   19.8   0.0     0.0011   18.7   0.0    1.6  1  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
     0.0052   16.7   0.8       0.12   12.3   0.0    2.6  3  NACHT            NACHT domain
     0.0069   16.1   0.0      0.022   14.5   0.0    1.9  1  IstB_IS21        IstB-like ATP binding protein
  ------ inclusion threshold ------
      0.012   15.0   0.2      0.012   15.0   0.2    1.9  1  Mg_chelatase     Magnesium chelatase, subunit ChlI
      0.013   15.6   0.0      0.036   14.2   0.0    1.7  1  AAA_2            AAA domain (Cdc48 subfamily)
      0.014   16.0   0.0      0.029   14.9   0.0    1.6  1  AAA_18           AAA domain
      0.028   13.6   0.0      0.092   11.9   0.0    1.9  2  DUF815           Protein of unknown function (DUF815)
      0.034   14.4   0.0      0.073   13.3   0.0    1.6  1  AAA_28           AAA domain
      0.039   13.6   0.0       0.09   12.4   0.0    1.5  1  Peptidase_M50B   Peptidase M50B-like
      0.049   13.8   0.0       0.12   12.6   0.0    1.7  1  AAA_33           AAA domain
      0.051   13.6   0.0       0.33   11.0   0.0    2.3  2  AAA_14           AAA domain
      0.077   12.5   0.0       0.22   11.0   0.0    1.7  1  AAA_7            P-loop containing dynein motor region
        0.1   12.1   3.1       0.33   10.5   0.2    2.4  2  AAA_25           AAA domain
       0.11   12.5   0.0       0.22   11.5   0.0    1.4  1  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
       0.11   12.2   0.0       0.42   10.3   0.0    1.9  2  Sigma54_activat  Sigma-54 interaction domain
       0.11   12.2   0.0       0.23   11.1   0.0    1.5  1  AAA_24           AAA domain
       0.16   11.7   0.5       0.47   10.1   0.5    1.8  1  AAA_30           AAA domain
       0.16   11.3   0.1       0.53    9.6   0.0    1.9  2  ATPase           KaiC


Domain annotation for each model (and alignments):
>> Peptidase_M41  Peptidase family M41
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  204.7   0.4   1.6e-63   1.2e-60       2     189 ..     498     674 ..     497     676 .. 0.97

  Alignments for each domain:
  == domain 1  score: 204.7 bits;  conditional E-value: 1.6e-63
                    X--HHHHHHHHHHHHHHHHHHCCSSS-S-B--EES--TTS-----------TSS--BHHHHHHHHHHHHHHHHHHHHHHH..S-BGGGHHHHHHHH CS
  Peptidase_M41   2 visekekklvAyHEaGHalvglllkeadpveKvtiiPRgqalGltlslPeedklsltkeellarlavllGGraaEelifg..evttGasnDlekat 95 
                    v++ ++k ++AyHE+GHalv+ll+ +a++ +K+ti+PRg++lG+t+slP++dk s+t++e+la+++v++GGraaEel++g  ++t+Ga+nD++kat
     EPX73535.1 498 VVTAESKLMTAYHEGGHALVALLTRNAMRPYKATIMPRGSSLGMTISLPDMDKDSWTRDEYLAMMDVAMGGRAAEELLYGknNITSGAHNDIDKAT 593
                    78999***************************************************************************999************* PP

                    HHHHHHHHTS---TTT-S--------..----.------SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSEE-HHHHH CS
  Peptidase_M41  96 kiarkmvtefGmsdklGpvsleeeeeeevflgkelkkekelseetaeeideevkelveeayerakeileekreelealaeaLlekEtldaeeie 189
                    ++ar+mvtefGms+++Gpvsle + +             +ls++t++++++e+k+l+e+ay+ra  +l+++++el+ +a+aL+++E l+aee++
     EPX73535.1 594 QVARRMVTEFGMSEQIGPVSLEADLD-------------SLSPTTKAIVEAEIKSLLEAAYQRALLLLKSHKKELDSIANALVDYEYLTAEEMR 674
                    ********************888555.............58***************************************************97 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.0   0.0     4e-44   2.9e-41       1     132 []     283     417 ..     283     417 .. 0.98

  Alignments for each domain:
  == domain 1  score: 141.0 bits;  conditional E-value: 4e-44
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTS CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkk 99 
                 vll+GppGtGKT+la+ava e++v+f+ +sgs++ ++yvg ++k++relf +a+++a p i+fiDE+da++++r+ ++  + ++++nqLl  ldg++k 
  EPX73535.1 283 VLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDEMYVGVGAKRVRELFVAARKHA-PAIIFIDELDAIGQKRNARDAAHMRQTLNQLLVDLDGFSKG 380
                 79******************************************************9.****************9999*******************99 PP

                 ...SSTEEEEEEESSGGGSTHHHHS.TTSSEEEETTS CS
         AAA 100 ...eskvivigatnrpdkldpallr.gRfdrkieiel 132
                     ++v++igatn p++ldpal r gRfdr+i+++l
  EPX73535.1 381 edvAHPVVFIGATNFPESLDPALTRpGRFDRHIHVPL 417
                 999889***************************9985 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.1   0.0   2.1e-10   1.5e-07       2      44 ..     440     482 ..     439     483 .. 0.97
   2 ?   -1.1   0.1       2.4   1.7e+03      17      31 ..     631     645 ..     631     658 .. 0.87

  Alignments for each domain:
  == domain 1  score: 31.1 bits;  conditional E-value: 2.1e-10
   AAA_lid_3   2 vdlkeLAerTeGySGADlaalcreAallAlrrgikeitmedfe 44 
                 vdl+ +A+ T G+ GADla+l++ Aa +A +    ++ m+d+e
  EPX73535.1 440 VDLSIIARGTSGFAGADLANLINQAAVRASKNHSSKVAMHDLE 482
                 9****************************************97 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 2.4
   AAA_lid_3  17 ADlaalcreAallAl 31 
                 A++++l  +A  +Al
  EPX73535.1 631 AEIKSLLEAAYQRAL 645
                 99*******999997 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.0   8.6e-07   0.00062      21      51 ..     275     307 ..     256     325 .. 0.70
   2 ?    5.1   0.2     0.039        28     123     146 ..     328     359 ..     322     390 .. 0.68
   3 ?   -2.4   0.0       7.3   5.2e+03     117     149 ..     455     486 ..     403     490 .. 0.75

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 8.6e-07
      AAA_16  21 sgrp..elvllsGesGvGKsslvrellralekd 51 
                  g+   + vll+G++G+GK+ l+r+++ +++  
  EPX73535.1 275 LGGKlpRGVLLTGPPGTGKTMLARAVAGEANVP 307
                 3333569******************99766655 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.039
      AAA_16 123 lkrllallsrderplvlvlDdlq.........w 146
                 +++l++ +++ + p ++++D+l+         +
  EPX73535.1 328 VRELFVAARK-HAPAIIFIDELDaigqkrnarD 359
                 5677777777.888*********6666654432 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 7.3
      AAA_16 117 srllellkrllallsrderplvlvlDdlqwade 149
                  +l++l++++++++s+  +   + + dl+w ++
  EPX73535.1 455 ADLANLINQAAVRASK-NHSSKVAMHDLEWSKD 486
                 7899999999988888.4447777778888766 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.0   4.4e-08   3.2e-05       1      78 [.     282     352 ..     282     405 .. 0.72
   2 ?   -1.6   0.0       3.3   2.4e+03      19      69 ..     461     515 ..     446     517 .. 0.69

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 4.4e-08
                 EEEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------..G-SEEEEESGGG-- CS
       AAA_5   1 dvlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar..egeilvlDEverae 78 
                 +vlL GppGtgK++la+ +a   n +++ + +++       + ++ + + ++++v   +v aar   ++i+++DE++ + 
  EPX73535.1 282 GVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQ-------FDEMYV-GVGAKRVRELFV-AARkhAPAIIFIDELDAIG 352
                 59******************************99.......344444.444566777777.6666889999999999765 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 3.3
                 GGGGB.....S--EEEEE--TT--HHHHH--B--.........--------G-SEE CS
       AAA_5  19 laaal.....nreveyvqltrdtteedlkgrreikngttslvdsplvraaregeil 69 
                 + +a      n +  + +    ++++ ++++ e +++  +  +s+l++a  eg ++
  EPX73535.1 461 INQAAvraskNHSSKVAMHDLEWSKDRILMGAE-RKSAVVTAESKLMTAYHEGGHA 515
                 444444555566666666667888888888888.5888888999999999988766 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   1.8e-05     0.013       8      29 ..     283     304 ..     279     318 .. 0.84
   2 ?    6.5   0.0     0.014       9.7      87     133 ..     333     395 ..     319     399 .. 0.70

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1.8e-05
      AAA_22   8 lvvtGesGtGKTtllrrlleql 29 
                 +++tG++GtGKT+l+r ++ ++
  EPX73535.1 283 VLLTGPPGTGKTMLARAVAGEA 304
                 589*************999876 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.014
      AAA_22  87 rarav..ielliiDEaqhlr..s........eealeeL.rsllnl...srkgvqliLvGtpel 133
                  a+++  ++++ iDE + +   +         + l++L ++l  +   ++   +++++G +++
  EPX73535.1 333 VAARKhaPAIIFIDELDAIGqkRnardaahmRQTLNQLlVDLDGFskgEDVAHPVVFIGATNF 395
                 444444559**********87515667767777777774555444988888889999998876 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.0   5.7e-08   4.1e-05      32      88 ..     255     316 ..     218     337 .. 0.77

  Alignments for each domain:
  == domain 1  score: 23.0 bits;  conditional E-value: 5.7e-08
                 XXXXXXXXXXXXXX....XXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  32 areaagvivelike....kklaG...ravLlaGpsgtGktalaiaiskelgedvpfvalsgsev 88 
                 a+e    iv+++k+     +l+G   r+vLl+Gp+gtGkt la a++ e +  vpf ++sgs++
  EPX73535.1 255 AKEELEEIVNFLKDpthfTRLGGklpRGVLLTGPPGTGKTMLARAVAGEAN--VPFFFMSGSQF 316
                 5555555555555432224566633379*******************9976..*********86 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   1.5e-06    0.0011      35      71 ..     282     318 ..     245     374 .. 0.76

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 1.5e-06
      RuvB_N  35 hvllyGpPGlGkttlakiiakelgvklkitsgPvlek 71 
                  vll+GpPG Gkt la+ +a e +v +   sg   ++
  EPX73535.1 282 GVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDE 318
                 69************************99999987765 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.3   0.0   0.00016      0.12       3      23 ..     283     303 ..     281     308 .. 0.87
   2 ?    1.8   0.0      0.28     2e+02      79     113 ..     337     371 ..     324     375 .. 0.78
   3 ?   -2.7   0.0       6.8   4.9e+03     101     145 ..     625     668 ..     616     674 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00016
                 EEEEC-TTTCHHHHHHHHHHH CS
       NACHT   3 vilqGeaGsGKTtLlqklala 23 
                 v+l+G++G GKT+L++ +a +
  EPX73535.1 283 VLLTGPPGTGKTMLARAVAGE 303
                 89**************99865 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.28
                 SCCCEEEEEE-STT-SS-TCH.........HHHHH CS
       NACHT  79 lperlLlilDglDelvtdlgqkekqpvrtlLseli 113
                     + + +D lD + ++ ++ +++++r+ L++l+
  EPX73535.1 337 KHAPAIIFIDELDAIGQKRNARDAAHMRQTLNQLL 371
                 344556778********999999999999999997 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 6.8
                 ........HHHHHCTTTTT--EEEEEEECCCHHHHCTTSSCE..E CS
       NACHT 101 ekqpvrtlLselirkkllpeasllltvrpralrdleeqleeaivl 145
                 +k+ v+  +++l+++   ++a lll ++ + l  ++  l++ ++l
  EPX73535.1 625 TKAIVEAEIKSLLEA-AYQRALLLLKSHKKELDSIANALVDYEYL 668
                 556777888888888.77788888888888887787777776555 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   3.1e-05     0.022      49      71 ..     282     304 ..     278     358 .. 0.91

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 3.1e-05
   IstB_IS21  49 nivllGpsGvGKshlaialgvea 71 
                 +++l+Gp+G+GK+ la a++ ea
  EPX73535.1 282 GVLLTGPPGTGKTMLARAVAGEA 304
                 689***************98776 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.2   1.7e-05     0.012      25      43 ..     283     301 ..     279     304 .. 0.90

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 1.7e-05
  Mg_chelatase  25 lllvGppGsGKtmlakrlp 43 
                   +ll+GppG+GKtmla++++
    EPX73535.1 283 VLLTGPPGTGKTMLARAVA 301
                   79*************9875 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   5.1e-05     0.036       6      90 ..     283     360 ..     281     395 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 5.1e-05
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTS..EEEEETGGG----------- CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG..ivllDEidKihpkessgadv 90 
                 +ll+gp g+Gkt+la+a+a   +v    ++  +  s++ e   +   v    + + + v+a ++   i+++DE+d i + +++ +d 
  EPX73535.1 283 VLLTGPPGTGKTMLARAVAGEANV----PFFFMSGSQFDE---MYVGVGAKRVRELF-VAARKHApaIIFIDELDAIGQ-KRNARDA 360
                 5899*******************8....999999999999...44444444444444.444444446**********99.5555554 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.0     4e-05     0.029       1      24 [.     283     306 ..     283     361 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 4e-05
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf 24 
                 +lltG+pG+GKt la++++ + ++
  EPX73535.1 283 VLLTGPPGTGKTMLARAVAGEANV 306
                 79***************9876544 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00013     0.092      16      77 ..     234     304 ..     225     348 .. 0.80
   2 ?   -2.7   0.1       3.8   2.7e+03      70      97 ..     633     660 ..     631     671 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00013
      DUF815  16 lepveevd.evklddLvgidkqkealvente......qf..leglpannvLLwGarGtGKSslvkallney 77 
                  ep+ee +  v+++d++g+d+ ke+l e ++      +f  l g+  + vLL+G  GtGK  l +a+  e+
  EPX73535.1 234 QEPIEERSiDVRFSDVQGVDEAKEELEEIVNflkdptHFtrLGGKLPRGVLLTGPPGTGKTMLARAVAGEA 304
                 5666554327999**********9997644311111144234589999******************98776 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 3.8
      DUF815  70 vkallneyaeegLrlievekedlkelpk 97 
                 +k+ll+++ ++ L l++ +k++l+++ +
  EPX73535.1 633 IKSLLEAAYQRALLLLKSHKKELDSIAN 660
                 8999999999999999999999988764 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0    0.0001     0.073       2      25 ..     283     307 ..     282     374 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 0.0001
      AAA_28   2 ivitGgestGKTtlleaLa.argyp 25 
                 + +tG+++tGKT l++a a + ++p
  EPX73535.1 283 VLLTGPPGTGKTMLARAVAgEANVP 307
                 789**************99433555 PP

>> Peptidase_M50B  Peptidase M50B-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   0.00013      0.09      23      39 ..     505     521 ..     493     527 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00013
  Peptidase_M50B  23 lvvffHElGHalaalLt 39 
                     l +  HE+GHal+alLt
      EPX73535.1 505 LMTAYHEGGHALVALLT 521
                     7899************9 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   0.00016      0.12       2      24 ..     283     305 ..     283     371 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00016
      AAA_33   2 vllvGlpGsGKstlaerllkklg 24 
                 vll G+pG+GK+ la+ ++ +  
  EPX73535.1 283 VLLTGPPGTGKTMLARAVAGEAN 305
                 7899*************998766 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       2.9   2.1e+03      64      86 ..     180     201 ..     158     243 .. 0.63
   2 ?   11.0   0.0   0.00046      0.33       5      77 ..     283     352 ..     280     375 .. 0.73

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 2.9
      AAA_14  64 kktylflDEiqevpewekalksl 86 
                    y+++DE     +++++ + +
  EPX73535.1 180 TPMYVVIDESRFT-KFFRIFRFI 201
                 5678999996544.444444444 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00046
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyinldderdkkla.dpekllelileklkeekktylflDEiqevp 77 
                 +++tG+  +GKT+l++ ++ e       +++++  + ++       +++ el+ +  k +   ++f+DE   + 
  EPX73535.1 283 VLLTGPPGTGKTMLARAVAGEAN---VPFFFMSGSQFDEMYVGvGAKRVRELFVAARK-HAPAIIFIDELDAIG 352
                 789****************9988...78888888887775444223356677777644.47899*****98774 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00031      0.22      34      58 ..     281     305 ..     270     372 .. 0.69

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00031
       AAA_7  34 kpvllvGptGtGKtviikdllkkld 58 
                 + vll+Gp GtGKt++++ +  + +
  EPX73535.1 281 RGVLLTGPPGTGKTMLARAVAGEAN 305
                 679*************998877666 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.2   0.00046      0.33      36      54 ..     283     301 ..     263     310 .. 0.83
   2 ?    1.0   0.0      0.37   2.6e+02     130     172 ..     328     370 ..     309     372 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00046
      AAA_25  36 allaGapgtGKttlaldla 54 
                 +ll+G+pgtGKt+la  +a
  EPX73535.1 283 VLLTGPPGTGKTMLARAVA 301
                 68************96655 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.37
      AAA_25 130 vdaleaaieevegvrlvviDplsralgg.densnsdvgalveal 172
                 v++l  a+++ + ++ + iD l+++ +  +  +++ +++ +++l
  EPX73535.1 328 VRELFVAARK-HAPAIIFIDELDAIGQKrNARDAAHMRQTLNQL 370
                 6777888888.77**********999886777777789999887 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0    0.0003      0.22       8      44 ..     273     305 ..     253     314 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.0003
                 HHHHHHHHHCHTEEEEEEESTTSSHHHHHHHHHHHTT CS
        TsaE   8 ealgkklakalgdvilLeGdLGaGKTtlvrglakalg 44 
                 ++lg kl +     +lL+G+ G+GKT+l+r++a + +
  EPX73535.1 273 TRLGGKLPR----GVLLTGPPGTGKTMLARAVAGEAN 305
                 333333333....5*****************997765 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00059      0.42      23      43 ..     281     301 ..     263     317 .. 0.86
   2 ?   -2.3   0.0       4.2     3e+03      19      52 ..     438     471 ..     422     479 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00059
                      S-EEEECSTTSSHHHHHHHHH CS
  Sigma54_activat  23 lsvlitGesGtGKellaraih 43 
                        vl+tG  GtGK++lara+ 
       EPX73535.1 281 RGVLLTGPPGTGKTMLARAVA 301
                      579***************985 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 4.2
                      CTSSS-EEEECSTTSSHHHHHHHHHHHSTTTTS- CS
  Sigma54_activat  19 aktdlsvlitGesGtGKellaraiheaskrkekp 52 
                       + dls++ +G sG     la++i +a  r++k+
       EPX73535.1 438 YTVDLSIIARGTSGFAGADLANLINQAAVRASKN 471
                      5667899999999999999999999987777664 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00033      0.23       5      28 ..     283     309 ..     279     366 .. 0.66

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00033
      AAA_24   5 iliyGpsgiGKTtlakel...gpkplf 28 
                 +l++Gp+g+GKT+la+      + p+f
  EPX73535.1 283 VLLTGPPGTGKTMLARAVageANVPFF 309
                 79*************998654333444 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.5   0.00066      0.47      21      39 ..     283     301 ..     278     368 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00066
      AAA_30  21 avltGpAGtGKttalkalr 39 
                 ++ltGp+GtGKt++ +a++
  EPX73535.1 283 VLLTGPPGTGKTMLARAVA 301
                 689**********999986 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.0   0.00074      0.53      16      37 ..     279     298 ..     248     304 .. 0.75
   2 ?   -2.1   0.0       2.8     2e+03     114     148 ..     334     371 ..     327     376 .. 0.64

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00074
      ATPase  16 ipegrvvlitGepGtGKtifal 37 
                 +p  r vl+tG pGtGKt++a 
  EPX73535.1 279 LP--RGVLLTGPPGTGKTMLAR 298
                 44..459************985 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 2.8
      ATPase 114 aikeikakrvviDsitgl.ayee..keavaReilrqlv 148
                 a ++     + iD ++++ ++++  ++a +R++l ql+
  EPX73535.1 334 AARKHAPAIIFIDELDAIgQKRNarDAAHMRQTLNQLL 371
                 55666667788999998864443113445788888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (689 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       552  (0.0307881); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        73  (0.00407162); expected 17.9 (0.001)
Passed Fwd filter:                        25  (0.00139439); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              25  [number of targets reported over threshold]
# CPU time: 0.66u 0.31s 00:00:00.97 Elapsed: 00:00:00.44
# Mc/sec: 4680.08
//
Query:       EPX73536.1  [L=289]
Description: V-type ATPase V1 subunit D [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-66  223.5   4.3    3.2e-66  222.9   4.3    1.3  1  ATP-synt_D  ATP synthase subunit D
  ------ inclusion threshold ------
        9.7    5.8  13.5        2.3    7.9   9.0    1.9  2  Cwf_Cwc_15  Cwf15/Cwc15 cell cycle control protein


Domain annotation for each model (and alignments):
>> ATP-synt_D  ATP synthase subunit D
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  222.9   4.3   3.6e-70   3.2e-66       2     196 .]      16     209 ..      15     209 .. 0.96

  Alignments for each domain:
  == domain 1  score: 222.9 bits;  conditional E-value: 3.6e-70
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTST.TSTSHHHHHHHSSS.SS-..TSS-SEEEEEEBTTSEEEEEE CS
  ATP-synt_D   2 LirlkkrlklaqrghslLkkKrdaLilefreilkelkelreeleeelkeayfslaea.faaggeediesavlesvklakvvkvelktenvaGVkvpvfe 99 
                 L+ +k+rlk+aq ghslLk+K++aL ++frei+ ++++++ +++++++ a+fs+ae+ fa+g++  i+  v++svk+a+ +kv +k+en+ GV +p+fe
  EPX73536.1  16 LTTMKTRLKGAQTGHSLLKRKSEALKKRFREIVVNIDQAKHKMGRVMQIAAFSMAEVgFAMGNN--INFEVQQSVKQAR-LKVHSKQENISGVFLPAFE 111
                 999******************************************************9999955..5555*******99.******************8 PP

                 E-...S.SSTSSSSSSSSTCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  ATP-synt_D 100 leee.ksdstelygllrtgaqldeavealrellellvelasletslelLdeeikktnrRvNaLekvvIPrleetikyIkseLdEqereeffrlkkvkk 196
                  + + + d+++l+gl+r+g+q+++a++ + +++++lv+las++ +++lL ++++ tnrRvN +e+++IPrle+tikyI+seL+E ere+f+rlkkv+k
  EPX73536.1 112 TNLNeNIDDFQLTGLGRGGQQIQKARQFYGKAVDTLVQLASYQSAFILLGDVLQITNRRVNSIEHIIIPRLENTIKYIESELEELEREDFTRLKKVQK 209
                 766678899***************************************************************************************96 PP

>> Cwf_Cwc_15  Cwf15/Cwc15 cell cycle control protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.1     0.079   7.1e+02      35     218 ..      18      55 ..      12     102 .. 0.62
   2 ?    7.9   9.0   0.00025       2.3      54     144 ..     189     286 ..     180     287 .. 0.48

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.079
                 ------TTT--HHHHHHS-HHHHHHHHHHHHHHHHH-------------------------------------..------------------------ CS
  Cwf_Cwc_15  35 kLKfRqegqgteeelekrdlraeLeeaeaeakakkrkkaeleaeeeeekekkeeeeeeeeeeakrrkeelleeareidaddedseeeeeeeeeesddds 133
                 ++K+R +g +t ++l                                                                                    
  EPX73536.1  18 TMKTRLKGAQTGHSL------------------------------------------------------------------------------------ 32 
                 444554444444443.................................................................................... PP

                 ----------------------------------------------------------...------------TTTS-SS-S-SS CS
  Cwf_Cwc_15 134 dsdsdddddedetaeLlrELekikreraeekerkerekaeeeekereeeiatgNpLlnlkskeesedfkvkrrWdddvvFknqar 218
                                                                         l+      +++ ++k+r ++ vv  +qa+
  EPX73536.1  33 --------------------------------------------------------LK------RKSEALKKRFREIVVNIDQAK 55 
                 ........................................................33......123334444444444444443 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.00025
                 HHHHHHHHHHHHHHHHH-------------------------------------........-----------------......-------------- CS
  Cwf_Cwc_15  54 lraeLeeaeaeakakkrkkaeleaeeeeekekkeeeeeeeeeeakrrkeellee......areidaddedseeeeeeee......eesdddsdsdsddd 140
                 + +eLee e+e +++ +k ++ ++++ee+++ ++++e+ ++  +  +  e+++       +     +  ++ e+++++e      ++s + sd+d++ d
  EPX73536.1 189 IESELEELEREDFTRLKKVQKIKEQREENEAVADTKEAGANVVQATSDGEIVKPpsvevgK-----QLISEAEKNTDKEdtyslpSTSTNVSDDDKEAD 282
                 6789*********999998888887776444444444443333333333444333222221.....222111111111122233333333344444444 PP

                 ---- CS
  Cwf_Cwc_15 141 dded 144
                 +ded
  EPX73536.1 283 SDED 286
                 4443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1454  (0.0810977); expected 358.6 (0.02)
Passed bias filter:                      529  (0.0295053); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 2009.00
//
Query:       EPX73537.1  [L=181]
Description: exosome subunit Csl4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.7e-20   72.0   3.3    3.3e-11   43.8   0.1    2.2  2  EXOSC1    Exosome component EXOSC1/CSL4


Domain annotation for each model (and alignments):
>> EXOSC1  Exosome component EXOSC1/CSL4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.6   0.9   9.2e-11   1.7e-06       1      29 [.      54      82 ..      54      85 .. 0.95
   2 !   43.8   0.1   1.8e-15   3.3e-11      70     109 .]      86     125 ..      83     125 .. 0.96

  Alignments for each domain:
  == domain 1  score: 28.6 bits;  conditional E-value: 9.2e-11
                -S-TT-EEEEEEEEEESSEEEEEEEEECT CS
      EXOSC1  1 lPkegdvVLarvtrlrkkqalveilsveg 29
                lPk+g+vVLarvtr++ +qa+v+i +v++
  EPX73537.1 54 LPKVGSVVLARVTRINVRQATVSITVVDD 82
                8************************9975 PP

  == domain 2  score: 43.8 bits;  conditional E-value: 1.8e-15
                 T.SEEEEEECCCTECCSSSTT-GGCTEECTTEEEEEEEEC CS
      EXOSC1  70 getfkaiirsqdvRatekdrvkviemfrpGDIvraqviSl 109
                 +e+++++i  qd+Ra+ek +vkv+++frpGDIvra v+Sl
  EPX73537.1  86 KEEYQGVIHVQDIRASEKSKVKVQNSFRPGDIVRALVLSL 125
                 689************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       421  (0.0234815); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.28s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1282.88
//
Query:       EPX73538.1  [L=94]
Description: U6 snRNP-associated protein Lsm8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-15   57.1   0.2    1.3e-15   56.8   0.2    1.2  1  LSM       LSM domain


Domain annotation for each model (and alignments):
>> LSM  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.8   0.2   7.3e-20   1.3e-15       3      66 ..       3      69 ..       1      70 [. 0.95

  Alignments for each domain:
  == domain 1  score: 56.8 bits;  conditional E-value: 7.3e-20
                HHHTTTSEEEEEETTSEEEEEEEEEEETTSEEEEEEEEEEETTET...EEEEEEEEEEEGGGEEEEE CS
         LSM  3 lkklinkkvtvelkngrelrGtLkgfDqfmNlvLedveetlkdkk...ekrklglvliRGnnivlis 66
                l+++ +kkv+v++++gr++ G L+gfD   Nl+L++ +e++ + +   e+  lg +l+RG+n+++++
  EPX73538.1  3 LADFFEKKVQVITNDGRVVLGLLQGFDHTTNLILSESVERIISLDqdtETIPLGVYLLRGENVAIVG 69
                788899************************************999999***************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       385  (0.0214736); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.27s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 675.25
//
Query:       EPX73539.1  [L=445]
Description: fumarate lyase superfamily protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.8e-42  144.2   0.0    9.2e-42  143.5   0.0    1.2  1  Lyase_1   Lyase
    2.5e-16   60.0   0.2      1e-15   58.0   0.1    2.2  2  ADSL_C    Adenylosuccinate lyase C-terminus
  ------ inclusion threshold ------
      0.063   13.0   0.0       0.27   10.9   0.0    2.2  1  Crp       Bacterial regulatory proteins, crp family


Domain annotation for each model (and alignments):
>> Lyase_1  Lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.5   0.0   1.5e-45   9.2e-42       9     306 ..      19     296 ..      12     301 .. 0.91

  Alignments for each domain:
  == domain 1  score: 143.5 bits;  conditional E-value: 1.5e-45
                 HHHHHHHHHHHHHGGGHHHHHCHHHHHHHHHHHTTSSTHHHHHHHHHHHHHHHCHCHHCGGHHHBSSSSSHHHHHHHHHHHHHHHHTTHSSGIIIIITT CS
     Lyase_1   9 klmgiftersrenfrlseedikalaalkkaaakanvdlkeeaaaiikaldevleegklddqfvlkviqegsgtavnmnlnevigellgekvepndkvht 107
                 k+  i++++ r++++l+     ++ al+ka a+++++++e+ ++i ++++      k  d  +l+  + ++g  v   +   i++l     ++ +++h 
  EPX73539.1  19 KVSHIWSDEYRTQQYLN-----WESALAKAEASLGLIPQEASKEISRVCEV-----KNIDFRRLEEETLTIGYPVLG-VVHQIAKLCR--EDAGKYCHW 104
                 56778999999999999.....****************9999999988864.....444566899999999999999.6666774555..69******* PP

                 T--HHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTT-EEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTCEETTTTTTTSS CS
     Lyase_1 108 gqSsnDqvpTalrlalkkalsekLlpaleqLidalkekakefkdvvkiGrThlqdAtPvtlgqelsayaealerdrerlkellkrllvellgggtavgt 206
                 g++++D+ +T   +++ ++  +++  +leq i+  +  a+++++++++Gr  lq+A+P+t+g +++     ++r+++rl ell+rl+v  +gg+ ++ +
  EPX73539.1 105 GATTQDVTDTTTIIQILESF-KVVRYYLEQAIEFTEILARKYRETPMVGRSNLQQAVPITFGFKMARLLCTFRRHIQRLDELLPRLSVIEFGGACGTLA 202
                 ********************.88**************************************************************************** PP

                 TTTSCC.THHHHHHHHHHHHHCSTEESSSHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTSSEEEEGCCTSSC-TTSTTTEBTHHHHHHH CS
     Lyase_1 207 glnadp.efaelvakelakvtglpvkapnsfeavsdrDavvellgalkllatsLskfaeDlrllssgeaglvelslaesepGSSiMPgKvNPvqlEllt 304
                  l+ d  +++e++akel+ ++    ++  ++   ++rD+++e+   l ++   L kfa D+ l+++ e+g+v++   ++   SS+MP+K+NP+++  +t
  EPX73539.1 203 SLGKDGlKVQERLAKELG-LST---PEIAWH---TERDRITEAGCFLGIVTGTLGKFAFDVKLMMQNEIGEVNEPYVANRGSSSTMPQKRNPISCVYIT 294
                 *****9899*********.555...777777...9*********************************************7889***********8888 PP

                 HH CS
     Lyase_1 305 gv 306
                 + 
  EPX73539.1 295 SC 296
                 65 PP

>> ADSL_C  Adenylosuccinate lyase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0         1     6e+03      35      63 ..     302     334 ..     295     340 .. 0.63
   2 !   58.0   0.1   1.7e-19     1e-15       1      73 []     366     443 ..     366     443 .. 0.98

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 1
                 C....HHHHHHT-HHHHC.HHCHHHHHT-GGGCC CS
      ADSL_C  35 e....llelLaadpevkk.seeeldalfdpayyl 63 
                 +    lle++ +d e +  ++ e++ +  p+ ++
  EPX73539.1 302 QkvaaLLEAMVEDHERATgTW-EIEWIVLPEIFT 334
                 345567788777766664477.887777776666 PP

  == domain 2  score: 58.0 bits;  conditional E-value: 1.7e-19
                 TGGGHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHC...HHHHHHT-HHHH.C.HHCHHHHHT-GGGCCTTHHHHHHHH CS
      ADSL_C   1 GlifservllaLvkglgReeAyelVqeaamkawee...llelLaadpevk.k.seeeldalfdpayylgsadeivdrv 73 
                 Gli se+v+++L++ lgR eA+elV+ +++ + e+   l e+L+ +++v+ + +e+++ +l +pa+ylg+  e++drv
  EPX73539.1 366 GLISSEAVMMKLASFLGRDEAHELVYSLCKISKEKgqsLEEVLLREKTVTdHlTEKQVLDLVNPANYLGQTLEMIDRV 443
                 9********************************99***************87*999*********************8 PP

>> Crp  Bacterial regulatory proteins, crp family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   4.5e-05      0.27       9      23 ..     430     444 ..     430     445 .] 0.96

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 4.5e-05
                 HHHHTS-HHHHHHHH CS
         Crp   9 AdylGlTrETVSRlL 23 
                 A+ylG T+E++ R+L
  EPX73539.1 430 ANYLGQTLEMIDRVL 444
                 9*************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (445 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       461  (0.0257125); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 3109.98
//
Query:       EPX73540.1  [L=304]
Description: meiotic chromosome segregation protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      5e-57  192.2   0.0    6.6e-57  191.8   0.0    1.2  1  DUF1989   Domain of unknown function (DUF1989)


Domain annotation for each model (and alignments):
>> DUF1989  Domain of unknown function (DUF1989)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  191.8   0.0   3.7e-61   6.6e-57       3     167 .]      62     234 ..      60     234 .. 0.98

  Alignments for each domain:
  == domain 1  score: 191.8 bits;  conditional E-value: 3.7e-61
     DUF1989   3 iparsgravevkaGqvlriidleGkqvvdllafnaddprerlsaadTrklqgsahlttgdrlysnl..grplltiveDtv.........grHDtlggac 90 
                 +++rsg av+++a +v+ri+++eG+qv+dl+++n ++prer++aa+Tr+l+ sah++t drl+snl   rpl+ti++D++         ++HDtlg++c
  EPX73540.1  62 CAPRSGIAVTIPAKSVFRITTPEGPQVCDLNIWNLHNPRERFWAARTRQLH-SAHVSTFDRLWSNLpyLRPLVTITADSMearhdewggRVHDTLGTRC 159
                 689************************************************.************************************99********* PP

     DUF1989  91 daevnellygegkeyhrnCrdnllralakyglterdvpdvlNlFmnvgvdedgrlfmeespskpGdyvelraemDll 167
                 d++v +l +g   +++ +C++nl+r +  yglte+dv+dvlN+F+++g++e++++fme++p++  dy+e++ e+Dll
  EPX73540.1 160 DPYVDKLISG--IDNDLHCHSNLTRSVMPYGLTEFDVHDVLNVFQVTGLNEHDQYFMEACPATSSDYFECFCEQDLL 234
                 ******9995..569************9***********************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       389  (0.0216967); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2231.16
//
Query:       EPX73541.1  [L=259]
Description: hypothetical protein SOCG_02763 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.093   12.3   1.7       0.31   10.7   1.7    1.9  1  MotB_plug  Membrane MotB of proton-channel complex MotA/MotB


Domain annotation for each model (and alignments):
>> MotB_plug  Membrane MotB of proton-channel complex MotA/MotB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   1.7   1.7e-05      0.31      17      41 ..      22      47 ..      15      49 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 1.7e-05
   MotB_plug 17 rWlvtYaDlmtL.LlaFFvlLfsmss 41
                +W++ +   m+  L ++Fv+L+s+ss
  EPX73541.1 22 QWMANFTSIMSSfLYIVFVVLWSISS 47
                59999999997616699*******98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1748  (0.0974957); expected 358.6 (0.02)
Passed bias filter:                      560  (0.0312343); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.34s 00:00:00.96 Elapsed: 00:00:00.54
# Mc/sec: 1444.16
//
Query:       EPX73542.1  [L=1397]
Description: ski complex TPR repeat subunit Ski3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.3e-41  136.8  23.2     0.0001   22.0   0.0   16.4 16  TPR_1           Tetratricopeptide repeat
      3e-40  133.1  23.6    6.8e-06   25.8   0.1   16.9 17  TPR_2           Tetratricopeptide repeat
      6e-34  113.4  15.8      0.005   16.9   0.2   15.6 14  TPR_8           Tetratricopeptide repeat
    1.3e-33  115.3  16.8    7.5e-07   29.6   0.2   12.0 12  TPR_19          Tetratricopeptide repeat
    4.5e-26   89.3  13.7    0.00072   20.2   0.0   15.7 16  TPR_14          Tetratricopeptide repeat
    6.9e-24   82.5  14.7      0.022   15.1   0.0   12.8 11  TPR_17          Tetratricopeptide repeat
    1.7e-22   79.8   3.3    0.00012   22.6   0.0   10.1 10  TPR_16          Tetratricopeptide repeat
    1.3e-20   72.8  21.1     0.0017   18.0   0.1   14.2 15  TPR_11          TPR repeat
    1.5e-16   60.4  28.7    4.8e-05   23.6   0.0   11.0 13  TPR_12          Tetratricopeptide repeat
    1.2e-12   47.8   0.1    0.00039   20.5   0.0    8.7  9  TPR_9           Tetratricopeptide repeat
    1.9e-11   44.0  32.5     0.0069   16.6   0.5   10.9 12  ANAPC3          Anaphase-promoting complex, cyclosome, subuni
      5e-11   42.5  12.8        6.5    7.6   0.0   12.2 11  TPR_6           Tetratricopeptide repeat
      1e-10   40.9  10.3        5.4    7.3   0.0   11.7 11  TPR_7           Tetratricopeptide repeat
    1.1e-07   31.4  11.1       0.96    9.4   0.0    9.8  8  TPR_10          Tetratricopeptide repeat
    5.5e-07   29.3   2.7     0.0044   16.4   0.1    5.4  6  TPR_MalT        MalT-like TPR region
    9.9e-06   24.5   0.6      0.017   13.8   0.0    3.8  4  PknG_TPR        Protein kinase G tetratricopeptide repeat
     0.0001   22.6   0.8       0.82   10.1   0.0    5.7  4  TPR_20          Tetratricopeptide repeat
    0.00021   21.3   1.4      0.041   13.8   0.0    3.0  2  Wzy_C_2         Virulence factor membrane-bound polymerase, C
    0.00039   20.5   1.5        0.3   11.2   0.3    3.8  3  TPR_22          Tetratricopeptide repeat
    0.00089   19.0   3.9        1.5    8.5   0.0    5.0  5  TPR_21          Tetratricopeptide repeat-like domain
     0.0035   17.8   0.0         90    4.2   0.0    5.2  4  TPR_4           Tetratricopeptide repeat
     0.0067   15.9   0.3       0.71    9.4   0.1    4.0  3  SHNi-TPR        SHNi-TPR
     0.0098   16.1   0.0      0.033   14.4   0.0    1.8  1  Ribosomal_L36e  Ribosomal protein L36e
  ------ inclusion threshold ------
      0.014   15.8   9.8        1.1    9.6   0.1    5.4  5  BTAD            Bacterial transcriptional activator domain
      0.027   14.1   0.0       0.35   10.5   0.1    2.8  2  HrpB1_HrpK      Bacterial type III secretion protein (HrpB1_H
      0.031   14.1   0.2        9.3    6.1   0.0    3.2  2  SGTA_dimer      Homodimerisation domain of SGTA
       0.17   12.0   4.6        2.9    8.0   0.4    4.4  4  HEPN            HEPN domain
       0.24   11.5   9.3         27    4.8   0.0    5.6  6  DUF3856         Domain of Unknown Function (DUF3856)


Domain annotation for each model (and alignments):
>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0     0.013       8.4      13      34 .]      28      49 ..      23      49 .. 0.88
   2 !   20.8   0.3   3.8e-07   0.00024       2      32 ..      51      81 ..      50      83 .. 0.93
   3 ?    3.0   0.1      0.15        98      19      34 .]     448     463 ..     448     463 .. 0.94
   4 ?    6.5   0.0     0.012       7.8       3      34 .]     466     497 ..     464     497 .. 0.93
   5 !    8.3   0.0    0.0032         2      10      30 ..     506     526 ..     501     530 .. 0.89
   6 !   14.4   0.1     4e-05     0.026       1      31 [.     575     605 ..     575     607 .. 0.93
   7 !   15.7   0.0   1.5e-05    0.0097       4      34 .]     653     683 ..     652     683 .. 0.93
   8 !   22.0   0.0   1.6e-07    0.0001       3      34 .]     686     717 ..     686     717 .. 0.97
   9 ?    5.3   0.0     0.029        19       4      28 ..     721     745 ..     718     746 .. 0.83
  10 ?   -0.2   0.0       1.6     1e+03       2      14 ..     888     900 ..     887     902 .. 0.85
  11 !    8.6   0.2    0.0027       1.7      20      34 .]     913     927 ..     913     927 .. 0.97
  12 !    8.5   0.0    0.0029       1.9       4      33 ..     931     960 ..     929     961 .. 0.93
  13 ?    0.7   0.0      0.83   5.3e+02      22      34 .]     983     995 ..     963     995 .. 0.83
  14 ?   -1.9   0.0       5.7   3.6e+03      10      30 ..    1005    1025 ..     997    1027 .. 0.77
  15 ?    0.5   0.0      0.97   6.2e+02       2      23 ..    1122    1143 ..    1121    1150 .. 0.84
  16 !   12.4   0.0   0.00016      0.11       8      30 ..    1170    1192 ..    1168    1196 .. 0.92

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.013
                HTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1 13 klgkydeAleyyekALelnPnn 34
                + ++y+e +  +ekAL+ + +n
  EPX73542.1 28 STKDYEETITQCEKALSFDSEN 49
                679**************99876 PP

  == domain 2  score: 20.8 bits;  conditional E-value: 3.8e-07
                HHHHHHHHHHHHTT-HHHHHHHHHHHHHHST CS
       TPR_1  2 kalynlGnayfklgkydeAleyyekALelnP 32
                +a+  lG+ay +l+k  eA ++y+ A+el+ 
  EPX73542.1 51 NAYVFLGVAYSSLNKEPEAKKAYQNAIELDD 81
                68999************************95 PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.15
                 HHHHHHHHHHHHSTTH CS
       TPR_1  19 eAleyyekALelnPnn 34 
                 +A+e y+k+L + Pnn
  EPX73542.1 448 QAEELYKKVLAHVPNN 463
                 79**********9998 PP

  == domain 4  score: 6.5 bits;  conditional E-value: 0.012
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   3 alynlGnayfklgkydeAleyyekALelnPnn 34 
                 al +l+ + +++++y +A +  e +L+ nP++
  EPX73542.1 466 ALIGLAGVQMENEQYSDAAQTLENVLRENPED 497
                 88899999**********************86 PP

  == domain 5  score: 8.3 bits;  conditional E-value: 0.0032
                 HHHHTT-HHHHHHHHHHHHHH CS
       TPR_1  10 ayfklgkydeAleyyekALel 30 
                 +y+ lg++d+A e  + +L++
  EPX73542.1 506 CYYMLGDLDKAMEQVQTCLQI 526
                 9************99999988 PP

  == domain 6  score: 14.4 bits;  conditional E-value: 4e-05
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHS CS
       TPR_1   1 akalynlGnayfklgkydeAleyyekALeln 31 
                 a ++  lG+ y++  +   A ++++kA el+
  EPX73542.1 575 ASTYTELGYYYRNVHDISRAMKCFQKAFELE 605
                 6789***********************9985 PP

  == domain 7  score: 15.7 bits;  conditional E-value: 1.5e-05
                 HHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   4 lynlGnayfklgkydeAleyyekALelnPnn 34 
                 ++ lG+  ++ ++++ A+ +++ AL++ P++
  EPX73542.1 653 HKSLGVFQLHSKNFQNAIVHFQAALRIFPKD 683
                 578999***********************86 PP

  == domain 8  score: 22.0 bits;  conditional E-value: 1.6e-07
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   3 alynlGnayfklgkydeAleyyekALelnPnn 34 
                 ++ +lG ay + g+y  Al+++++A  l+Pn+
  EPX73542.1 686 CWSGLGEAYARSGRYISALKAFNRASALDPND 717
                 599***************************97 PP

  == domain 9  score: 5.3 bits;  conditional E-value: 0.029
                 HHHHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_1   4 lynlGnayfklgkydeAleyyekAL 28 
                  y +G +   +g+++ A e  + +L
  EPX73542.1 721 RYFIGSIQKDMGDFENAMETLSSVL 745
                 6889*************99776665 PP

  == domain 10  score: -0.2 bits;  conditional E-value: 1.6
                 HHHHHHHHHHHHT CS
       TPR_1   2 kalynlGnayfkl 14 
                  ++yn G+ y+ l
  EPX73542.1 888 ASWYNTGVSYYTL 900
                 58********965 PP

  == domain 11  score: 8.6 bits;  conditional E-value: 0.0027
                 HHHHHHHHHHHSTTH CS
       TPR_1  20 AleyyekALelnPnn 34 
                 A+++ ++A++l+P+n
  EPX73542.1 913 AIDCLKQAIKLEPKN 927
                 9************98 PP

  == domain 12  score: 8.5 bits;  conditional E-value: 0.0029
                 HHHHHHHHHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1   4 lynlGnayfklgkydeAleyyekALelnPn 33 
                 ++ lG+++ +      A  ++ +AL++n+ 
  EPX73542.1 931 WCMLGVLLSNSSSIRAAQHCFIQALQINER 960
                 9***************************86 PP

  == domain 13  score: 0.7 bits;  conditional E-value: 0.83
                 HHHHHHHHHSTTH CS
       TPR_1  22 eyyekALelnPnn 34 
                  ++ + ++++P+n
  EPX73542.1 983 NAFTRSISIDPDN 995
                 689********98 PP

  == domain 14  score: -1.9 bits;  conditional E-value: 5.7
                  HHHHTT-HHHHHHHHHHHHHH CS
       TPR_1   10 ayfklgkydeAleyyekALel 30  
                  +  + g++++ +++ + A e+
  EPX73542.1 1005 CSISTGDHEKTVQALQHAFEI 1025
                  556779999999999998876 PP

  == domain 15  score: 0.5 bits;  conditional E-value: 0.97
                  HHHHHHHHHHHHTT-HHHHHHH CS
       TPR_1    2 kalynlGnayfklgkydeAley 23  
                  +a  +l+ ++++l+k++e  e+
  EPX73542.1 1122 DAKGQLARLCLRLNKFEESSEH 1143
                  567789***********97765 PP

  == domain 16  score: 12.4 bits;  conditional E-value: 0.00016
                  HHHHHHTT-HHHHHHHHHHHHHH CS
       TPR_1    8 GnayfklgkydeAleyyekALel 30  
                  G+a + lg++++ l+++ek Lel
  EPX73542.1 1170 GLAAYFLGNLEQSLQHFEKSLEL 1192
                  8999******************9 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.1       1.2   7.8e+02       9      33 ..      24      48 ..      19      49 .. 0.80
   2 !   16.7   0.1   8.8e-06    0.0056       3      32 ..      52      81 ..      50      83 .. 0.93
   3 ?    5.2   0.1     0.041        26       6      34 .]     434     463 ..     430     463 .. 0.86
   4 !    7.7   0.0    0.0069       4.4       3      34 .]     466     497 ..     464     497 .. 0.93
   5 !   14.8   0.0   3.6e-05     0.023       4      31 ..     500     527 ..     498     530 .. 0.90
   6 !   13.0   0.1   0.00014     0.089       3      30 ..     577     604 ..     575     606 .. 0.92
   7 !   13.6   0.0   8.5e-05     0.054       7      34 .]     656     683 ..     653     683 .. 0.91
   8 !   25.8   0.1   1.1e-08   6.8e-06       3      34 .]     686     717 ..     685     717 .. 0.96
   9 ?   -0.6   0.0       3.1     2e+03       5      24 ..     722     741 ..     719     746 .. 0.82
  10 ?   -2.2   0.2       9.6   6.2e+03       5      20 ..     763     778 ..     759     781 .. 0.80
  11 ?    0.3   0.0       1.6     1e+03       2      14 ..     888     900 ..     887     904 .. 0.84
  12 ?    6.3   0.0     0.018        12      20      34 .]     913     927 ..     909     927 .. 0.93
  13 ?    4.0   0.0       0.1        64       3      33 ..     930     960 ..     928     961 .. 0.91
  14 ?    2.8   0.0      0.25   1.6e+02       3      34 .]     964     995 ..     962     995 .. 0.89
  15 ?    0.2   0.0       1.7   1.1e+03       2      31 ..     997    1026 ..     996    1029 .. 0.85
  16 ?    4.4   0.0     0.074        47       6      30 ..    1126    1150 ..    1121    1153 .. 0.88
  17 !   13.2   0.1   0.00011     0.073       7      30 ..    1169    1192 ..    1165    1196 .. 0.90

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 1.2
       TPR_2  9 layyklgdyeeAleafekAleldPn 33
                + ++  +dyee +  +ekAl+ d +
  EPX73542.1 24 REALSTKDYEETITQCEKALSFDSE 48
                5567789999999999999998866 PP

  == domain 2  score: 16.7 bits;  conditional E-value: 8.8e-06
       TPR_2  3 alynlGlayyklgdyeeAleafekAleldP 32
                a+  lG ay  l++  eA++a++ A+eld 
  EPX73542.1 52 AYVFLGVAYSSLNKEPEAKKAYQNAIELDD 81
                8999************************96 PP

  == domain 3  score: 5.2 bits;  conditional E-value: 0.041
       TPR_2   6 nlGlayyklgdy.eeAleafekAleldPnn 34 
                 ++G++yy+  +y  +A+e+++k+l++ Pnn
  EPX73542.1 434 AIGYSYYEVPRYiLQAEELYKKVLAHVPNN 463
                 577888888888889*************98 PP

  == domain 4  score: 7.7 bits;  conditional E-value: 0.0069
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldPnn 34 
                 al  l+ + +++ +y +A++ +e +l+ +P++
  EPX73542.1 466 ALIGLAGVQMENEQYSDAAQTLENVLRENPED 497
                 78889999**********************86 PP

  == domain 5  score: 14.8 bits;  conditional E-value: 3.6e-05
       TPR_2   4 lynlGlayyklgdyeeAleafekAleld 31 
                 l +l ++yy lgd+++A e  + +l++ 
  EPX73542.1 500 LSQLSWCYYMLGDLDKAMEQVQTCLQIL 527
                 7899********************9985 PP

  == domain 6  score: 13.0 bits;  conditional E-value: 0.00014
       TPR_2   3 alynlGlayyklgdyeeAleafekAlel 30 
                  + +lG+ y++  d  +A ++f+kA el
  EPX73542.1 577 TYTELGYYYRNVHDISRAMKCFQKAFEL 604
                 6889*********************998 PP

  == domain 7  score: 13.6 bits;  conditional E-value: 8.5e-05
       TPR_2   7 lGlayyklgdyeeAleafekAleldPnn 34 
                 lG   +++++++ A+ +f++Al++ P++
  EPX73542.1 656 LGVFQLHSKNFQNAIVHFQAALRIFPKD 683
                 8888999*******************86 PP

  == domain 8  score: 25.8 bits;  conditional E-value: 1.1e-08
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldPnn 34 
                 ++  lG+ay+++g+y  Al+af++A +ldPn+
  EPX73542.1 686 CWSGLGEAYARSGRYISALKAFNRASALDPND 717
                 6999**************************97 PP

  == domain 9  score: -0.6 bits;  conditional E-value: 3.1
       TPR_2   5 ynlGlayyklgdyeeAleaf 24 
                 y +G +   +gd+e A e +
  EPX73542.1 722 YFIGSIQKDMGDFENAMETL 741
                 678999999*******9865 PP

  == domain 10  score: -2.2 bits;  conditional E-value: 9.6
       TPR_2   5 ynlGlayyklgdyeeA 20 
                  +l + y++ g y++ 
  EPX73542.1 763 LRLSKYYIHHGYYQRS 778
                 689999******9875 PP

  == domain 11  score: 0.3 bits;  conditional E-value: 1.6
       TPR_2   2 ealynlGlayykl 14 
                   +yn G +yy l
  EPX73542.1 888 ASWYNTGVSYYTL 900
                 67*********77 PP

  == domain 12  score: 6.3 bits;  conditional E-value: 0.018
       TPR_2  20 AleafekAleldPnn 34 
                 A++++++A++l+P+n
  EPX73542.1 913 AIDCLKQAIKLEPKN 927
                 9************97 PP

  == domain 13  score: 4.0 bits;  conditional E-value: 0.1
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldPn 33 
                  +++lG ++ ++     A ++f +Al+++++
  EPX73542.1 930 FWCMLGVLLSNSSSIRAAQHCFIQALQINER 960
                 699999999999999*************986 PP

  == domain 14  score: 2.8 bits;  conditional E-value: 0.25
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldPnn 34 
                 ++ n G ++++  d e A +af +++++dP+n
  EPX73542.1 964 VWVNYGALCLQILDIECADNAFTRSISIDPDN 995
                 7888999999999999999***********98 PP

  == domain 15  score: 0.2 bits;  conditional E-value: 1.7
       TPR_2    2 ealynlGlayyklgdyeeAleafekAleld 31  
                  +a+   +++ +  gd+e+ ++a++ A e+ 
  EPX73542.1  997 RAWLGYAYCSISTGDHEKTVQALQHAFEIS 1026
                  689999***********9999999888875 PP

  == domain 16  score: 4.4 bits;  conditional E-value: 0.074
       TPR_2    6 nlGlayyklgdyeeAleafekAlel 30  
                  +l++++++l+++ee  e+   Al l
  EPX73542.1 1126 QLARLCLRLNKFEESSEHASVALDL 1150
                  79***************99999887 PP

  == domain 17  score: 13.2 bits;  conditional E-value: 0.00011
       TPR_2    7 lGlayyklgdyeeAleafekAlel 30  
                   Gla+y lg++e+ l++fek+lel
  EPX73542.1 1169 CGLAAYFLGNLEQSLQHFEKSLEL 1192
                  599********************9 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.1     0.024        16       7      33 ..      22      48 ..      16      49 .. 0.87
   2 !   16.9   0.2   7.9e-06     0.005       2      33 ..      51      82 ..      50      83 .. 0.94
   3 ?   -0.5   0.0       3.1     2e+03       3      34 .]     466     497 ..     464     497 .. 0.85
   4 ?    5.6   0.0     0.035        22       6      30 ..     502     526 ..     498     526 .. 0.88
   5 !   12.3   0.1   0.00024      0.15       1      32 [.     575     606 ..     575     608 .. 0.92
   6 ?    3.7   0.0      0.14        91       8      34 .]     657     683 ..     655     683 .. 0.85
   7 !   14.3   0.0   5.5e-05     0.035       3      34 .]     686     717 ..     684     717 .. 0.93
   8 !   11.6   0.0    0.0004      0.25       5      24 ..     722     741 ..     720     747 .. 0.88
   9 ?    5.3   0.0     0.043        28      20      34 .]     913     927 ..     909     927 .. 0.92
  10 !    8.2   0.0    0.0048       3.1       3      32 ..     930     959 ..     929     961 .. 0.94
  11 ?    5.5   0.0     0.037        24       2      34 .]     963     995 ..     962     995 .. 0.94
  12 !    8.0   0.0    0.0057       3.6       2      31 ..     997    1026 ..     996    1029 .. 0.93
  13 ?    1.5   0.0      0.69   4.4e+02       3      22 ..    1123    1142 ..    1121    1150 .. 0.86
  14 ?    5.9   0.0     0.027        17       8      30 ..    1170    1192 ..    1167    1196 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.024
                HHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8  7 lgsiylklgdyeeAkeyyekaleldpd 33
                 ++  l+++dyee +  +ekal+ d +
  EPX73542.1 22 AAREALSTKDYEETITQCEKALSFDSE 48
                5677899****************9986 PP

  == domain 2  score: 16.9 bits;  conditional E-value: 7.9e-06
                CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8  2 eayynlgsiylklgdyeeAkeyyekaleldpd 33
                 ay+ lg +y++l++  eAk++y+ a+eld +
  EPX73542.1 51 NAYVFLGVAYSSLNKEPEAKKAYQNAIELDDK 82
                69***************************965 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 3.1
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyekaleldpdn 34 
                 a+  l+ + ++ ++y  A +++e +l+ +p++
  EPX73542.1 466 ALIGLAGVQMENEQYSDAAQTLENVLRENPED 497
                 5667788889999*************999975 PP

  == domain 4  score: 5.6 bits;  conditional E-value: 0.035
                 HHHHHHHHTT-HHHHHHHHHHHHHH CS
       TPR_8   6 nlgsiylklgdyeeAkeyyekalel 30 
                 +l+++y  lgd+++A+e  + +l++
  EPX73542.1 502 QLSWCYYMLGDLDKAMEQVQTCLQI 526
                 79999************99999976 PP

  == domain 5  score: 12.3 bits;  conditional E-value: 0.00024
                 CCHHHHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   1 aeayynlgsiylklgdyeeAkeyyekaleldp 32 
                 a+ y  lg+ y++  d+  A+++++ka el+ 
  EPX73542.1 575 ASTYTELGYYYRNVHDISRAMKCFQKAFELEA 606
                 5789*************************986 PP

  == domain 6  score: 3.7 bits;  conditional E-value: 0.14
                 HHHHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8   8 gsiylklgdyeeAkeyyekaleldpdn 34 
                 g   l  +++++A+  ++ al++ p++
  EPX73542.1 657 GVFQLHSKNFQNAIVHFQAALRIFPKD 683
                 56667789***************9985 PP

  == domain 7  score: 14.3 bits;  conditional E-value: 5.5e-05
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyekaleldpdn 34 
                  +  lg +y   g+y +A +++++a  ldp++
  EPX73542.1 686 CWSGLGEAYARSGRYISALKAFNRASALDPND 717
                 57789*************************96 PP

  == domain 8  score: 11.6 bits;  conditional E-value: 0.0004
                 HHHHHHHHHTT-HHHHHHHH CS
       TPR_8   5 ynlgsiylklgdyeeAkeyy 24 
                 y +gsi +++gd+e+A+e++
  EPX73542.1 722 YFIGSIQKDMGDFENAMETL 741
                 89****************87 PP

  == domain 9  score: 5.3 bits;  conditional E-value: 0.043
                 HHHHHHHHHHHHHH. CS
       TPR_8  20 Akeyyekaleldpdn 34 
                 A+ ++++a++l+p+n
  EPX73542.1 913 AIDCLKQAIKLEPKN 927
                 99***********97 PP

  == domain 10  score: 8.2 bits;  conditional E-value: 0.0048
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyekaleldp 32 
                  +++lg ++++   + +A+ ++ +al++++
  EPX73542.1 930 FWCMLGVLLSNSSSIRAAQHCFIQALQINE 959
                 69**************************97 PP

  == domain 11  score: 5.5 bits;  conditional E-value: 0.037
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldpdn 34 
                 ++++n g ++l+  d+e A  ++ + +++dpdn
  EPX73542.1 963 DVWVNYGALCLQILDIECADNAFTRSISIDPDN 995
                 789****************************97 PP

  == domain 12  score: 8.0 bits;  conditional E-value: 0.0057
                  CHHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
       TPR_8    2 eayynlgsiylklgdyeeAkeyyekaleld 31  
                  +a++  +++ +++gd+e+ ++++++a e++
  EPX73542.1  997 RAWLGYAYCSISTGDHEKTVQALQHAFEIS 1026
                  89999**********************997 PP

  == domain 13  score: 1.5 bits;  conditional E-value: 0.69
                  HHHHHHHHHHHTT-HHHHHH CS
       TPR_8    3 ayynlgsiylklgdyeeAke 22  
                  a  +l++++l l+++ee+ e
  EPX73542.1 1123 AKGQLARLCLRLNKFEESSE 1142
                  6679*************976 PP

  == domain 14  score: 5.9 bits;  conditional E-value: 0.027
                  HHHHHHTT-HHHHHHHHHHHHHH CS
       TPR_8    8 gsiylklgdyeeAkeyyekalel 30  
                  g++   lg++e++ + +ek lel
  EPX73542.1 1170 GLAAYFLGNLEQSLQHFEKSLEL 1192
                  677889***************98 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.2   0.00015     0.096       3      57 ..      28      82 ..      26      97 .. 0.88
   2 ?   -0.7   0.0       3.4   2.2e+03      10      47 ..     366     403 ..     364     416 .. 0.83
   3 !   29.6   0.2   1.2e-09   7.5e-07       9      59 ..     448     498 ..     446     503 .. 0.95
   4 !   26.1   0.2   1.4e-08   8.9e-06       2      50 ..     475     522 ..     474     531 .. 0.93
   5 ?    1.1   0.1      0.93     6e+02       6      47 ..     590     631 ..     589     645 .. 0.77
   6 !   24.2   0.0   5.6e-08   3.6e-05       4      58 ..     663     717 ..     660     722 .. 0.94
   7 !   20.6   0.0   7.6e-07   0.00048       4      53 ..     697     746 ..     696     756 .. 0.93
   8 ?    6.9   0.0     0.014       9.3       3      37 ..     730     764 ..     728     768 .. 0.84
   9 ?    3.4   0.0      0.17   1.1e+02       9      55 ..     912     958 ..     910     974 .. 0.83
  10 !   15.9   0.0   2.1e-05     0.014      12      50 ..     983    1021 ..     977    1045 .. 0.90
  11 ?    7.2   0.1     0.012       7.4      21      46 ..    1117    1142 ..    1094    1162 .. 0.80
  12 ?    5.1   0.0     0.052        33       5      40 ..    1177    1212 ..    1176    1237 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 0.00015
      TPR_19  3 aegdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpd 57
                  +dy+e +   e+al+ d +n +a   L  a+ +l+   eA+++ + + e d +
  EPX73542.1 28 STKDYEETITQCEKALSFDSENYNAYVFLGVAYSSLNKEPEAKKAYQNAIELDDK 82
                5689*****************************************9999998888 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 3.4
      TPR_19  10 AlalleqalqedpknaearllLAeallalgqldeAeal 47 
                  l++l+q +qe p+++ +   + + ++ l+++ +A +l
  EPX73542.1 366 VLSILSQSYQECPQSLLITEVYTQYCVYLKEYSDAVQL 403
                 5899**********999988888888888888888776 PP

  == domain 3  score: 29.6 bits;  conditional E-value: 1.2e-09
      TPR_19   9 eAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpdda 59 
                 +A +l++++l++ p+n  a+++LA +++++ q+ +A ++L+ +++e+p d+
  EPX73542.1 448 QAEELYKKVLAHVPNNYSALIGLAGVQMENEQYSDAAQTLENVLRENPEDP 498
                 799*********************************************987 PP

  == domain 4  score: 26.1 bits;  conditional E-value: 1.4e-08
      TPR_19   2 laegdyaeAlalleqalqedpknaearllLAeallalgqldeAealLda 50 
                 +++++y +A++ le++l e+p+++ +   L  +++ lg+ld+A++ +++
  EPX73542.1 475 MENEQYSDAAQTLENVLRENPEDPCLSQ-LSWCYYMLGDLDKAMEQVQT 522
                 799*************************.**************998776 PP

  == domain 5  score: 1.1 bits;  conditional E-value: 0.93
      TPR_19   6 dyaeAlalleqalqedpknaearllLAeallalgqldeAeal 47 
                 d  +A++ +++a++ ++ + +a+  LA+   ++ +++  e +
  EPX73542.1 590 DISRAMKCFQKAFELEASQTDAAEELAKMFAEAEEWELVEVI 631
                 567899999999999999999999999988888887765555 PP

  == domain 6  score: 24.2 bits;  conditional E-value: 5.6e-08
      TPR_19   4 egdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpdd 58 
                 ++++++A+ ++++al   pk+   + +L ea+  +g++  A ++ +++ + dp+d
  EPX73542.1 663 SKNFQNAIVHFQAALRIFPKDTHCWSGLGEAYARSGRYISALKAFNRASALDPND 717
                 689**************************************************95 PP

  == domain 7  score: 20.6 bits;  conditional E-value: 7.6e-07
      TPR_19   4 egdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpe 53 
                 +g+y +Al+++ +a + dp++++ r+    ++  +g+++ A+++L+ +++
  EPX73542.1 697 SGRYISALKAFNRASALDPNDWYTRYFIGSIQKDMGDFENAMETLSSVLQ 746
                 69999****************************************99876 PP

  == domain 8  score: 6.9 bits;  conditional E-value: 0.014
      TPR_19   3 aegdyaeAlalleqalqedpknaearllLAealla 37 
                 ++gd+++A++ l+++lq  p    ++l LAe  l 
  EPX73542.1 730 DMGDFENAMETLSSVLQGRPSEICVLLCLAETSLR 764
                 69******************888888877877665 PP

  == domain 9  score: 3.4 bits;  conditional E-value: 0.17
      TPR_19   9 eAlalleqalqedpknaearllLAeallalgqldeAealLdalpeed 55 
                  A++ l+qa++ +pkn + +  L  +l ++  + +A+ +  ++++ +
  EPX73542.1 912 VAIDCLKQAIKLEPKNNNFWCMLGVLLSNSSSIRAAQHCFIQALQIN 958
                 68999*************99999999999999988888776666555 PP

  == domain 10  score: 15.9 bits;  conditional E-value: 2.1e-05
      TPR_19   12 alleqalqedpknaearllLAeallalgqldeAealLda 50  
                  +++++ ++ dp+n++a+l++A + +++g+ ++  ++L+ 
  EPX73542.1  983 NAFTRSISIDPDNSRAWLGYAYCSISTGDHEKTVQALQH 1021
                  57889999***********************98888876 PP

  == domain 11  score: 7.2 bits;  conditional E-value: 0.012
      TPR_19   21 dpknaearllLAeallalgqldeAea 46  
                    k+ +a+ +LA+++l l+ ++e  +
  EPX73542.1 1117 LEKYVDAKGQLARLCLRLNKFEESSE 1142
                  46799*****************9654 PP

  == domain 12  score: 5.1 bits;  conditional E-value: 0.052
      TPR_19    5 gdyaeAlalleqalqedpknaearllLAeallalgq 40  
                  g++++ l+++e+ l+    ++++  l A++l+alg 
  EPX73542.1 1177 GNLEQSLQHFEKSLELGESHPDVVVLVAKVLWALGS 1212
                  789999****************************96 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0       7.1   4.5e+03      18      29 ..      17      28 ..       8      39 .. 0.59
   2 ?    2.0   0.0      0.77   4.9e+02       5      42 ..      20      57 ..      16      59 .. 0.83
   3 ?    5.5   0.1     0.056        36       3      41 ..      52      90 ..      50      92 .. 0.89
   4 ?    4.2   0.0      0.15        96      19      42 ..     448     471 ..     430     471 .. 0.79
   5 !    8.6   0.0    0.0058       3.7       4      35 ..     467     498 ..     465     498 .. 0.91
   6 ?    3.5   0.0      0.26   1.7e+02       6      30 ..     502     526 ..     499     544 .. 0.78
   7 !    8.5   0.0    0.0061       3.9       4      43 ..     578     617 ..     575     618 .. 0.92
   8 ?    7.7   0.0     0.011       7.2       7      35 ..     656     684 ..     652     688 .. 0.89
   9 !   20.2   0.0   1.1e-06   0.00072       4      40 ..     687     723 ..     684     727 .. 0.90
  10 ?    1.8   0.0      0.89   5.7e+02       7      34 ..     724     751 ..     720     761 .. 0.79
  11 ?    5.7   0.0      0.05        32      20      43 ..     913     936 ..     899     937 .. 0.90
  12 ?    1.7   0.0      0.94     6e+02       4      43 ..     931     970 ..     929     971 .. 0.85
  13 ?    7.7   0.0     0.011       7.1      20      43 ..     981    1004 ..     963    1005 .. 0.83
  14 ?    0.0   0.0       3.3   2.1e+03       4      23 ..    1124    1143 ..    1098    1156 .. 0.78
  15 ?    4.7   0.0      0.11        69       9      40 ..    1171    1202 ..    1164    1206 .. 0.81
  16 ?    2.4   0.0      0.57   3.6e+02       6      41 ..    1202    1240 ..    1197    1243 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 7.1
      TPR_14 18 deAiallrrala 29
                + A++++r+al+
  EPX73542.1 17 KPALKAAREALS 28
                345555555555 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.77
      TPR_14  5 lalaeallalGdpdeAiallrralalaPddaeawllla 42
                l++a+  l   d++e i+ +++al+ + ++  a+ +l+
  EPX73542.1 20 LKAAREALSTKDYEETITQCEKALSFDSENYNAYVFLG 57
                5677778888999999*******999999988888876 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.056
      TPR_14  3 allalaeallalGdpdeAiallrralalaPddaeawlll 41
                a+  l+ a+  l +  eA ++++ a++l+ +++ aw  l
  EPX73542.1 52 AYVFLGVAYSSLNKEPEAKKAYQNAIELDDKPLLAWQGL 90
                6677889999999999********************865 PP

  == domain 4  score: 4.2 bits;  conditional E-value: 0.15
      TPR_14  19 eAiallrralalaPddaeawllla 42 
                 +A++l++++la+ P++  a++ la
  EPX73542.1 448 QAEELYKKVLAHVPNNYSALIGLA 471
                 7****************9999887 PP

  == domain 5  score: 8.6 bits;  conditional E-value: 0.0058
      TPR_14   4 llalaeallalGdpdeAiallrralalaPdda 35 
                 l  la + ++++++ +A++ l+ +l+ +P+d+
  EPX73542.1 467 LIGLAGVQMENEQYSDAAQTLENVLRENPEDP 498
                 567999***********************996 PP

  == domain 6  score: 3.5 bits;  conditional E-value: 0.26
      TPR_14   6 alaeallalGdpdeAiallrralal 30 
                 +l + ++ lGd+d+A++  + +l+ 
  EPX73542.1 502 QLSWCYYMLGDLDKAMEQVQTCLQI 526
                 67777899**********9999985 PP

  == domain 7  score: 8.5 bits;  conditional E-value: 0.0061
      TPR_14   4 llalaeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 + +l+ ++++  d  +A++++++a +l  ++ +a  +la+
  EPX73542.1 578 YTELGYYYRNVHDISRAMKCFQKAFELEASQTDAAEELAK 617
                 56899******************************99997 PP

  == domain 8  score: 7.7 bits;  conditional E-value: 0.011
      TPR_14   7 laeallalGdpdeAiallrralalaPdda 35 
                 l+ + l++ +++ Ai ++++al+ +P+d 
  EPX73542.1 656 LGVFQLHSKNFQNAIVHFQAALRIFPKDT 684
                 6778899*******************985 PP

  == domain 9  score: 20.2 bits;  conditional E-value: 1.1e-06
      TPR_14   4 llalaeallalGdpdeAiallrralalaPddaeawll 40 
                 +  l+ea++++G++  A+++++ra al+P+d+ ++++
  EPX73542.1 687 WSGLGEAYARSGRYISALKAFNRASALDPNDWYTRYF 723
                 7889***************************988765 PP

  == domain 10  score: 1.8 bits;  conditional E-value: 0.89
      TPR_14   7 laeallalGdpdeAiallrralalaPdd 34 
                 ++++    Gd++ A++ l  +l+  P++
  EPX73542.1 724 IGSIQKDMGDFENAMETLSSVLQGRPSE 751
                 67778899*************9977765 PP

  == domain 11  score: 5.7 bits;  conditional E-value: 0.05
      TPR_14  20 AiallrralalaPddaeawlllaq 43 
                 Ai++l++a++l P++  +w +l+ 
  EPX73542.1 913 AIDCLKQAIKLEPKNNNFWCMLGV 936
                 9********************986 PP

  == domain 12  score: 1.7 bits;  conditional E-value: 0.94
      TPR_14   4 llalaeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 + +l+ +l ++   ++A  ++ +al+ +  d ++w  ++ 
  EPX73542.1 931 WCMLGVLLSNSSSIRAAQHCFIQALQINERDIDVWVNYGA 970
                 55777788888888999999***************99986 PP

  == domain 13  score: 7.7 bits;  conditional E-value: 0.011
      TPR_14   20 AiallrralalaPddaeawlllaq 43  
                  A +++ r ++ +Pd+ +awl +a 
  EPX73542.1  981 ADNAFTRSISIDPDNSRAWLGYAY 1004
                  557899****************97 PP

  == domain 14  score: 0.0 bits;  conditional E-value: 3.3
      TPR_14    4 llalaeallalGdpdeAial 23  
                    +la+++l+l +++e+ ++
  EPX73542.1 1124 KGQLARLCLRLNKFEESSEH 1143
                  45788888888888887665 PP

  == domain 15  score: 4.7 bits;  conditional E-value: 0.11
      TPR_14    9 eallalGdpdeAiallrralalaPddaeawll 40  
                   a + lG+++++++++++ l+l+ +++++  l
  EPX73542.1 1171 LAAYFLGNLEQSLQHFEKSLELGESHPDVVVL 1202
                  566679****************9999887665 PP

  == domain 16  score: 2.4 bits;  conditional E-value: 0.57
      TPR_14    6 alaeallalGd...pdeAiallrralalaPddaeawlll 41  
                  + a++l+alG     ++A++ l  + +++P++ + +  l
  EPX73542.1 1202 LVAKVLWALGSetgKQAAREQLLSVTEQHPEHIDSLVCL 1240
                  568999**997444444*************987666555 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.1    0.0059       3.8       2      33 ..      39      70 ..      38      71 .. 0.92
   2 ?   -1.6   0.0       7.6   4.8e+03       1      10 [.      72      81 ..      72      90 .. 0.76
   3 !    8.8   0.1    0.0036       2.3       1      32 [.     452     483 ..     452     485 .. 0.93
   4 ?    2.1   0.0      0.48   3.1e+02      17      32 ..     501     516 ..     486     519 .. 0.79
   5 !   12.7   0.0    0.0002      0.13       5      32 ..     567     594 ..     564     596 .. 0.91
   6 ?   -0.9   0.0       4.5   2.9e+03       1      28 [.     597     624 ..     597     647 .. 0.84
   7 !   10.8   0.0   0.00082      0.53       2      33 ..     673     704 ..     672     705 .. 0.93
   8 ?    3.2   0.0      0.22   1.4e+02       2      32 ..     707     737 ..     706     739 .. 0.88
   9 !   11.9   0.0   0.00037      0.24       1      27 [.     916     942 ..     916     949 .. 0.87
  10 ?    4.3   0.0       0.1        64       1      23 [.     950     972 ..     950     978 .. 0.88
  11 !   15.1   0.0   3.4e-05     0.022       2      31 ..     985    1014 ..     984    1020 .. 0.87

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0059
      TPR_17  2 ylkaleldPnnadaynnLAelllknGdlmtAr 33
                ++kal  d  n +ay  L+++++++++  +A+
  EPX73542.1 39 CEKALSFDSENYNAYVFLGVAYSSLNKEPEAK 70
                79*********************999887776 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 7.6
      TPR_17  1 lylkaleldP 10
                +y++a+eld 
  EPX73542.1 72 AYQNAIELDD 81
                59*****984 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.0036
      TPR_17   1 lylkaleldPnnadaynnLAelllknGdlmtA 32 
                 ly+k+l++ Pnn  a+  LA ++ +n ++ +A
  EPX73542.1 452 LYKKVLAHVPNNYSALIGLAGVQMENEQYSDA 483
                 7**************************98877 PP

  == domain 4  score: 2.1 bits;  conditional E-value: 0.48
      TPR_17  17 nnLAelllknGdlmtA 32 
                  +L ++++++Gdl++A
  EPX73542.1 501 SQLSWCYYMLGDLDKA 516
                 5788999999999988 PP

  == domain 5  score: 12.7 bits;  conditional E-value: 0.0002
      TPR_17   5 aleldPnnadaynnLAelllknGdlmtA 32 
                 +l+++Pn a  y++L++++++ +d  +A
  EPX73542.1 567 SLRCEPNFASTYTELGYYYRNVHDISRA 594
                 799******************9997776 PP

  == domain 6  score: -0.9 bits;  conditional E-value: 4.5
      TPR_17   1 lylkaleldPnnadaynnLAelllknGd 28 
                 +++ka el+ +  da  +LA+ ++++ +
  EPX73542.1 597 CFQKAFELEASQTDAAEELAKMFAEAEE 624
                 7999999999999999999999886654 PP

  == domain 7  score: 10.8 bits;  conditional E-value: 0.00082
      TPR_17   2 ylkaleldPnnadaynnLAelllknGdlmtAr 33 
                 ++ al++ P++   +  L+e++++ G++  A+
  EPX73542.1 673 FQAALRIFPKDTHCWSGLGEAYARSGRYISAL 704
                 899************************98886 PP

  == domain 8  score: 3.2 bits;  conditional E-value: 0.22
      TPR_17   2 ylkaleldPnnadaynnLAelllknGdlmtA 32 
                 + +a +ldPn+++  +  + +++  Gd++ A
  EPX73542.1 707 FNRASALDPNDWYTRYFIGSIQKDMGDFENA 737
                 789999**********999999999998877 PP

  == domain 9  score: 11.9 bits;  conditional E-value: 0.00037
      TPR_17   1 lylkaleldPnnadaynnLAelllknG 27 
                 ++++a++l+P+n +++++L++ll++  
  EPX73542.1 916 CLKQAIKLEPKNNNFWCMLGVLLSNSS 942
                 6899*******************9865 PP

  == domain 10  score: 4.3 bits;  conditional E-value: 0.1
      TPR_17   1 lylkaleldPnnadaynnLAell 23 
                 ++ +al+++  + d++ n++ l 
  EPX73542.1 950 CFIQALQINERDIDVWVNYGALC 972
                 6789****************985 PP

  == domain 11  score: 15.1 bits;  conditional E-value: 3.4e-05
      TPR_17    2 ylkaleldPnnadaynnLAelllknGdlmt 31  
                  +++++ +dP+n+ a+  +A++  + Gd+++
  EPX73542.1  985 FTRSISIDPDNSRAWLGYAYCSISTGDHEK 1014
                  89*******************999998764 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.2       2.1   1.3e+03      12      28 ..       8      24 ..       8      32 .. 0.81
   2 ?    6.8   0.1     0.017        11       1      60 [.      20      76 ..      20      83 .. 0.85
   3 ?    3.4   0.0      0.19   1.2e+02       6      39 ..      59      92 ..      56      93 .. 0.81
   4 !   13.4   0.0   0.00015     0.094      15      68 .]     448     498 ..     433     498 .. 0.86
   5 !   18.7   0.0   3.1e-06     0.002       3      59 ..     470     522 ..     468     531 .. 0.91
   6 ?    6.2   0.1     0.025        16       2      51 ..     580     626 ..     579     627 .. 0.91
   7 !   22.6   0.0   1.9e-07   0.00012      10      67 ..     663     717 ..     656     751 .. 0.95
   8 ?    0.5   0.0       1.5   9.7e+02      16      48 ..     913     942 ..     911     974 .. 0.77
   9 ?    5.5   0.0     0.044        28      18      52 ..     983    1014 ..     977    1022 .. 0.86
  10 ?    6.3   0.0     0.024        16       4      48 ..    1170    1211 ..    1168    1232 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 2.1
      TPR_16 12 dyddAaaaleaalkrdp 28
                +y++A+a+++ alk+++
  EPX73542.1  8 NYQRAIAMAKPALKAAR 24
                79999999999999884 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.017
      TPR_16  1 lalaraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraa 60
                l++ar+al  +dy++ + + e al  d   ++++ A+ +lg+a+  ++  +eA  +y+ a
  EPX73542.1 20 LKAAREALSTKDYEETITQCEKALSFD---SENYNAYVFLGVAYSSLNKEPEAKKAYQNA 76
                689999******************999...****************98888876555544 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.19
      TPR_16  6 aalragdyddAaaaleaalkrdpssPdaaeAlll 39
                a+  +++ ++A +a++ a+++d ++ +a++ l++
  EPX73542.1 59 AYSSLNKEPEAKKAYQNAIELDDKPLLAWQGLWN 92
                566677889*************888888887776 PP

  == domain 4  score: 13.4 bits;  conditional E-value: 0.00015
      TPR_16  15 dAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalraapdap 68 
                 +A+++++ +l+     P ++ Al +l+ +  ++  + +Aa+ ++  lr+ p +p
  EPX73542.1 448 QAEELYKKVLAHV---PNNYSALIGLAGVQMENEQYSDAAQTLENVLRENPEDP 498
                 8999999999999...99999999999999999999999988888888888876 PP

  == domain 5  score: 18.7 bits;  conditional E-value: 3.1e-06
      TPR_16   3 laraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyra 59 
                 la   +++ +y dAa  le +l+ +p++P     l  l ++++ +g+l++A ++++ 
  EPX73542.1 470 LAGVQMENEQYSDAAQTLENVLRENPEDP----CLSQLSWCYYMLGDLDKAMEQVQT 522
                 788999*******************9999....9******************88875 PP

  == domain 6  score: 6.2 bits;  conditional E-value: 0.025
      TPR_16   2 alaraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrla 51 
                 +l++++++  d  +A + ++ a ++        +A+ +l+ +++++ +++
  EPX73542.1 580 ELGYYYRNVHDISRAMKCFQKAFELE---ASQTDAAEELAKMFAEAEEWE 626
                 5899**********************...88888*****99999988775 PP

  == domain 7  score: 22.6 bits;  conditional E-value: 1.9e-07
      TPR_16  10 agdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalraapda 67 
                 +++++ A+  ++aal+ +   P + + + +lg+a++r gr+  A+ ++++a + +p++
  EPX73542.1 663 SKNFQNAIVHFQAALRIF---PKDTHCWSGLGEAYARSGRYISALKAFNRASALDPND 717
                 579999999*********...************************8888887888875 PP

  == domain 8  score: 0.5 bits;  conditional E-value: 1.5
      TPR_16  16 AaaaleaalkrdpssPdaaeAllllgdaalrqg 48 
                 A+  l++a+k+    P +  ++  lg+++   +
  EPX73542.1 913 AIDCLKQAIKLE---PKNNNFWCMLGVLLSNSS 942
                 777888888888...888888888888776554 PP

  == domain 9  score: 5.5 bits;  conditional E-value: 0.044
      TPR_16   18 aaleaalkrdpssPdaaeAllllgdaalrqgrlae 52  
                  +a+++ +  d   Pd+ +A+l+++ +    g++++
  EPX73542.1  983 NAFTRSISID---PDNSRAWLGYAYCSISTGDHEK 1014
                  6788888888...*************999999986 PP

  == domain 10  score: 6.3 bits;  conditional E-value: 0.024
      TPR_16    4 araalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqg 48  
                  ++aa+ +g+ ++ +  +e  l+++ s+Pd      l + +++++g
  EPX73542.1 1170 GLAAYFLGNLEQSLQHFEKSLELGESHPD---VVVLVAKVLWALG 1211
                  689*********************55555...7777777777776 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.1   0.00017      0.11       8      39 ..      30      61 ..      25      64 .. 0.92
   2 ?    5.0   1.5     0.031        20       4      24 ..      60      80 ..      59      83 .. 0.87
   3 ?   -0.1   0.1       1.2   7.5e+02      15      39 ..     451     475 ..     448     478 .. 0.83
   4 ?    0.8   0.1      0.64   4.1e+02       6      28 ..     476     498 ..     473     499 .. 0.91
   5 ?    0.2   0.1      0.95   6.1e+02       4      16 ..     507     519 ..     507     547 .. 0.54
   6 ?    0.6   0.0      0.72   4.6e+02      21      37 ..     568     584 ..     558     587 .. 0.80
   7 ?    0.3   0.0      0.89   5.7e+02      11      36 ..     592     617 ..     590     621 .. 0.79
   8 !   12.7   0.0   0.00012     0.075       9      42 .]     665     698 ..     663     698 .. 0.94
   9 !   18.0   0.1   2.7e-06    0.0017       1      42 []     691     732 ..     691     732 .. 0.93
  10 ?    1.3   0.0      0.44   2.8e+02       3      27 ..     727     751 ..     725     761 .. 0.77
  11 ?   -2.1   0.0       4.9   3.1e+03      28      40 ..     887     899 ..     886     900 .. 0.85
  12 !   15.5   0.0   1.6e-05      0.01      13      38 ..     913     938 ..     911     941 .. 0.94
  13 ?    2.6   0.0      0.17   1.1e+02      16      37 ..     950     971 ..     945     974 .. 0.86
  14 ?    0.7   0.0      0.68   4.4e+02      18      32 ..     986    1000 ..     978    1005 .. 0.77
  15 ?    6.3   0.0     0.012       7.7       3      42 .]    1172    1211 ..    1170    1211 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00017
      TPR_11  8 GkyeeAieaYkkAlkldPdnaeayynLGlayy 39
                 +yee i++ +kAl +d++n +ay  LG+ay 
  EPX73542.1 30 KDYEETITQCEKALSFDSENYNAYVFLGVAYS 61
                58*****************************6 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.031
      TPR_11  4 yyeqGkyeeAieaYkkAlkld 24
                y +++k +eA +aY++A++ld
  EPX73542.1 60 YSSLNKEPEAKKAYQNAIELD 80
                66788889************9 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 1.2
      TPR_11  15 eaYkkAlkldPdnaeayynLGlayy 39 
                 e Ykk l+  P+n +a+ +L+ +++
  EPX73542.1 451 ELYKKVLAHVPNNYSALIGLAGVQM 475
                 78***********999998887665 PP

  == domain 4  score: 0.8 bits;  conditional E-value: 0.64
      TPR_11   6 eqGkyeeAieaYkkAlkldPdna 28 
                 e  +y +A + +++ l+ +P+++
  EPX73542.1 476 ENEQYSDAAQTLENVLRENPEDP 498
                 6789****************998 PP

  == domain 5  score: 0.2 bits;  conditional E-value: 0.95
      TPR_11   4 yyeqGkyeeAiea 16 
                 yy +G++++A+e+
  EPX73542.1 507 YYMLGDLDKAMEQ 519
                 5666777777665 PP

  == domain 6  score: 0.6 bits;  conditional E-value: 0.72
      TPR_11  21 lkldPdnaeayynLGla 37 
                 l+  P++a+ y +LG+ 
  EPX73542.1 568 LRCEPNFASTYTELGYY 584
                 6678***********64 PP

  == domain 7  score: 0.3 bits;  conditional E-value: 0.89
      TPR_11  11 eeAieaYkkAlkldPdnaeayynLGl 36 
                   A+++++kA +l  ++ +a  +L++
  EPX73542.1 592 SRAMKCFQKAFELEASQTDAAEELAK 617
                 579**********9998887666665 PP

  == domain 8  score: 12.7 bits;  conditional E-value: 0.00012
      TPR_11   9 kyeeAieaYkkAlkldPdnaeayynLGlayykqG 42 
                 ++ +Ai ++++Al++ P++   +++LG+ay++ G
  EPX73542.1 665 NFQNAIVHFQAALRIFPKDTHCWSGLGEAYARSG 698
                 5789**************************9987 PP

  == domain 9  score: 18.0 bits;  conditional E-value: 2.7e-06
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldPdnaeayynLGlayykqG 42 
                 G ay   G+y  A++a+++A +ldP++    y +G ++  +G
  EPX73542.1 691 GEAYARSGRYISALKAFNRASALDPNDWYTRYFIGSIQKDMG 732
                 899************************999999998888777 PP

  == domain 10  score: 1.3 bits;  conditional E-value: 0.44
      TPR_11   3 ayyeqGkyeeAieaYkkAlkldPdn 27 
                 +  + G++e+A+e ++  l+ +P+ 
  EPX73542.1 727 IQKDMGDFENAMETLSSVLQGRPSE 751
                 55689**********9999987775 PP

  == domain 11  score: -2.1 bits;  conditional E-value: 4.9
      TPR_11  28 aeayynLGlayyk 40 
                 +  +yn G+ yy 
  EPX73542.1 887 PASWYNTGVSYYT 899
                 6789*******96 PP

  == domain 12  score: 15.5 bits;  conditional E-value: 1.6e-05
      TPR_11  13 AieaYkkAlkldPdnaeayynLGlay 38 
                 Ai ++k+A+kl P+n ++++ LG+++
  EPX73542.1 913 AIDCLKQAIKLEPKNNNFWCMLGVLL 938
                 9**********************876 PP

  == domain 13  score: 2.6 bits;  conditional E-value: 0.17
      TPR_11  16 aYkkAlkldPdnaeayynLGla 37 
                 ++ +Al++++ + +++ n G++
  EPX73542.1 950 CFIQALQINERDIDVWVNYGAL 971
                 5679************999875 PP

  == domain 14  score: 0.7 bits;  conditional E-value: 0.68
      TPR_11   18 kkAlkldPdnaeayy 32  
                   + + +dPdn +a++
  EPX73542.1  986 TRSISIDPDNSRAWL 1000
                  57799*****99875 PP

  == domain 15  score: 6.3 bits;  conditional E-value: 0.012
      TPR_11    3 ayyeqGkyeeAieaYkkAlkldPdnaeayynLGlayykqG 42  
                  a y +G++e+++++++k l+l ++ +++    +++++++G
  EPX73542.1 1172 AAYFLGNLEQSLQHFEKSLELGESHPDVVVLVAKVLWALG 1211
                  55668*******************9999888888888887 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.1       1.6     1e+03      18      41 ..       8      31 ..       8      39 .. 0.74
   2 !    9.5   0.1    0.0018       1.2      17      75 ..      30      80 ..      25      82 .. 0.79
   3 ?    1.6   0.2      0.52   3.3e+02      21      72 ..     448     491 ..     444     492 .. 0.68
   4 !   12.6   0.3    0.0002      0.13      47      76 ..     499     528 ..     465     529 .. 0.73
   5 !   11.9   0.1   0.00032      0.21      48      76 ..     500     528 ..     499     551 .. 0.74
   6 ?    1.7   0.1      0.49   3.1e+02       3      32 ..     575     604 ..     573     618 .. 0.68
   7 !   23.6   0.0   7.5e-08   4.8e-05       8      75 ..     655     714 ..     649     716 .. 0.90
   8 ?   -0.6   0.0       2.7   1.7e+03      10      62 ..     725     776 ..     720     789 .. 0.57
   9 ?   -1.7   0.0       5.9   3.8e+03      21      35 ..     946     960 ..     933     992 .. 0.70
  10 ?    5.1   0.0     0.042        27       4      52 ..     997    1045 ..     994    1047 .. 0.82
  11 ?    5.0   0.2     0.046        30      25      74 ..    1103    1150 ..    1100    1153 .. 0.80
  12 !   15.3   0.7   2.8e-05     0.018       7      76 ..    1125    1194 ..    1119    1195 .. 0.88
  13 !   11.0   0.1   0.00065      0.41      10      34 ..    1170    1194 ..    1160    1222 .. 0.76

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 1.6
      TPR_12 18 rydeAlellekaleiarrllGpdh 41
                +y+ A+++ + al +ar++l ++ 
  EPX73542.1  8 NYQRAIAMAKPALKAAREALSTKD 31
                689999999999999977765554 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.0018
      TPR_12 17 grydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealaia 75
                ++y+e ++ +ekal   +    +++    +++  Lg +y+ l++  eA ++++ a++++
  EPX73542.1 30 KDYEETITQCEKALSFDS----ENY----NAYVFLGVAYSSLNKEPEAKKAYQNAIELD 80
                677777777777777773....223....69***********************99986 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.52
      TPR_12  21 eAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleeal 72 
                 +A+el++k+l+ +     p++    ++l++L+ ++ + ++y +A + le +l
  EPX73542.1 448 QAEELYKKVLAHV-----PNN---YSALIGLAGVQMENEQYSDAAQTLENVL 491
                 4666666666666.....444...3478888888888888888888887555 PP

  == domain 4  score: 12.6 bits;  conditional E-value: 0.0002
      TPR_12  47 tlrnLgrlyralgryeeAlelleealaiae 76 
                 +l  L+++y++lg++++A e  + +l+i++
  EPX73542.1 499 CLSQLSWCYYMLGDLDKAMEQVQTCLQILQ 528
                 589***********************9975 PP

  == domain 5  score: 11.9 bits;  conditional E-value: 0.00032
      TPR_12  48 lrnLgrlyralgryeeAlelleealaiae 76 
                 l  L+++y++lg++++A e  + +l+i++
  EPX73542.1 500 LSQLSWCYYMLGDLDKAMEQVQTCLQILQ 528
                 66777777777777777777777777754 PP

  == domain 6  score: 1.7 bits;  conditional E-value: 0.49
      TPR_12   3 atalnnlaavlrrlgrydeAlellekalei 32 
                 a+++++l+  +r   +   A ++++ka e+
  EPX73542.1 575 ASTYTELGYYYRNVHDISRAMKCFQKAFEL 604
                 556666666666666666677777776666 PP

  == domain 7  score: 23.6 bits;  conditional E-value: 7.5e-08
      TPR_12   8 nlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealaia 75 
                  l+++ ++ ++++ A+ ++++al+i+   + ++h     +  +Lg++y ++gry  Al+++++a a++
  EPX73542.1 655 SLGVFQLHSKNFQNAIVHFQAALRIF---PKDTH-----CWSGLGEAYARSGRYISALKAFNRASALD 714
                 499999********************...66777.....*************************9986 PP

  == domain 8  score: -0.6 bits;  conditional E-value: 2.7
      TPR_12  10 aavlrrlgrydeAlellekaleia.rrllGpdhpltattlrnLgrlyralgrye 62 
                 +++   +g+++ A e l  +l+ + +++  +  +++a+t   L+ +y   g y+
  EPX73542.1 725 GSIQKDMGDFENAMETLSSVLQGRpSEI--CVLLCLAETSLRLSKYYIHHGYYQ 776
                 4555556666666666666666665555..555566666666666665555555 PP

  == domain 9  score: -1.7 bits;  conditional E-value: 5.9
      TPR_12  21 eAlellekaleiarr 35 
                  A+ ++ +al+i +r
  EPX73542.1 946 AAQHCFIQALQINER 960
                 456666666666543 PP

  == domain 10  score: 5.1 bits;  conditional E-value: 0.042
      TPR_12    4 talnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLg 52  
                  +a+  +a +    g++++  + l++a ei      + ++++a+++ n +
  EPX73542.1  997 RAWLGYAYCSISTGDHEKTVQALQHAFEISGGNIRDVNYWYASAMLNVA 1045
                  577788999999******************5555555669999998876 PP

  == domain 11  score: 5.0 bits;  conditional E-value: 0.046
      TPR_12   25 llekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealai 74  
                  llek +++ +++  +  + ++ +   L+rl+++l+++ee  e+   al++
  EPX73542.1 1103 LLEKEYDATESV--GALEKYVDAKGQLARLCLRLNKFEESSEHASVALDL 1150
                  667777777777..455668888899**************9999988887 PP

  == domain 12  score: 15.3 bits;  conditional E-value: 2.8e-05
      TPR_12    7 nnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealaiae 76  
                   +la +++rl +++e+ e+   al+++++  +  +   +    + g + + lg++e+ l+++e++l++ e
  EPX73542.1 1125 GQLARLCLRLNKFEESSEHASVALDLINEEDNSAKQVSVGLNLTCGLAAYFLGNLEQSLQHFEKSLELGE 1194
                  579************************9997777777777788889999*****************9865 PP

  == domain 13  score: 11.0 bits;  conditional E-value: 0.00065
      TPR_12   10 aavlrrlgrydeAlellekaleiar 34  
                  +++ + lg+++++l+++ek+le+ +
  EPX73542.1 1170 GLAAYFLGNLEQSLQHFEKSLELGE 1194
                  5667789999999999999999874 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0      0.64   4.1e+02       5      60 ..      26      81 ..      23      86 .. 0.92
   2 ?    4.2   0.0     0.072        46      28      64 ..     463     499 ..     447     504 .. 0.77
   3 ?    4.3   0.1     0.068        44       6      56 ..     475     524 ..     470     539 .. 0.65
   4 ?    0.8   0.0      0.87   5.5e+02      21      68 ..     567     615 ..     558     620 .. 0.77
   5 !   14.8   0.0   3.6e-05     0.023       9      62 ..     664     717 ..     657     717 .. 0.90
   6 !   20.5   0.0   6.1e-07   0.00039       3      60 ..     692     749 ..     690     754 .. 0.92
   7 ?   -0.3   0.0         2   1.3e+03      13      64 ..     912     963 ..     910     966 .. 0.83
   8 ?    2.1   0.0      0.35   2.2e+02      19      59 ..     986    1026 ..     970    1033 .. 0.90
   9 ?    2.6   0.0      0.23   1.5e+02      31      65 ..    1165    1199 ..    1159    1205 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.64
       TPR_9  5 aireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalap 60
                a++ +d+e+++  +e  l ++++    +   G+++  l+   +A ++ + +++l++
  EPX73542.1 26 ALSTKDYEETITQCEKALSFDSENYNAYVFLGVAYSSLNKEPEAKKAYQNAIELDD 81
                57889*********************************************999986 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.072
       TPR_9  28 dpeerrdRGlllaqlGclsaAladLeaylalapdapd 64 
                   + +   + ++++ +++s A++ Le  l+ +p++p 
  EPX73542.1 463 NYSALIGLAGVQMENEQYSDAAQTLENVLRENPEDPC 499
                 555555567788888999***********99999985 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.068
       TPR_9   6 ireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeayl 56 
                 +++e+++ a +++e +l  +P+dp +      +++ lG+l +A++  +++l
  EPX73542.1 475 MENEQYSDAAQTLENVLRENPEDPCL-SQLSWCYYMLGDLDKAMEQVQTCL 524
                 45666666666666666666666644.345566666666666666666666 PP

  == domain 4  score: 0.8 bits;  conditional E-value: 0.87
       TPR_9  21 llllaPddpeerrdRGlllaqlGclsaAladLeaylalap.dapdaeai 68 
                  l   P+ ++ + + G  +  + ++s A+++++ + +l+  + ++ae +
  EPX73542.1 567 SLRCEPNFASTYTELGYYYRNVHDISRAMKCFQKAFELEAsQTDAAEEL 615
                 567788888889999999999999999*****99998887444455555 PP

  == domain 5  score: 14.8 bits;  conditional E-value: 3.6e-05
       TPR_9   9 edweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapda 62 
                 ++++ a+   +  l ++P+d + +   G ++a++G++  Al++++++ al+p++
  EPX73542.1 664 KNFQNAIVHFQAALRIFPKDTHCWSGLGEAYARSGRYISALKAFNRASALDPND 717
                 6677777778899**************************************975 PP

  == domain 6  score: 20.5 bits;  conditional E-value: 6.1e-07
       TPR_9   3 aiaireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalap 60 
                 ++++r+ ++  al++ +r  +l+P+d++ r+  G ++  +G+++ A++ L   l+  p
  EPX73542.1 692 EAYARSGRYISALKAFNRASALDPNDWYTRYFIGSIQKDMGDFENAMETLSSVLQGRP 749
                 789***********************************************98887665 PP

  == domain 7  score: -0.3 bits;  conditional E-value: 2
       TPR_9  13 ralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapdapd 64 
                 +a+ ++   + l P+    +   G+ll  +  ++aA  ++ ++l++++ + d
  EPX73542.1 912 VAIDCLKQAIKLEPKNNNFWCMLGVLLSNSSSIRAAQHCFIQALQINERDID 963
                 5778888888888998889999999999999999999999999988887766 PP

  == domain 8  score: 2.1 bits;  conditional E-value: 0.35
       TPR_9   19 erllllaPddpeerrdRGlllaqlGclsaAladLeaylala 59  
                   r + ++Pd  + ++  + +    G+ ++ +++L+++ +++
  EPX73542.1  986 TRSISIDPDNSRAWLGYAYCSISTGDHEKTVQALQHAFEIS 1026
                  68999*******************************98876 PP

  == domain 9  score: 2.6 bits;  conditional E-value: 0.23
       TPR_9   31 errdRGlllaqlGclsaAladLeaylalapdapda 65  
                  + +  Gl+ + lG+l++ l+ +e  l+l ++ pd+
  EPX73542.1 1165 LNLTCGLAAYFLGNLEQSLQHFEKSLELGESHPDV 1199
                  666779*********************99999887 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.6    0.0061       3.9       2      52 ..      29      80 ..      28      88 .. 0.83
   2 ?   -0.7   0.1       2.6   1.7e+03       3      49 ..      71     130 ..      69     146 .. 0.80
   3 ?    5.8   0.1     0.025        16      43      77 ..     367     402 ..     364     406 .. 0.90
   4 !   14.6   0.3   4.6e-05     0.029       8      77 ..     449     518 ..     445     523 .. 0.60
   5 !   16.6   0.5   1.1e-05    0.0069       1      72 [.     476     547 ..     476     549 .. 0.87
   6 ?    2.4   0.2      0.29   1.9e+02      28      64 ..     580     617 ..     554     642 .. 0.63
   7 !   13.8   0.0   8.2e-05     0.052       4      72 ..     699     768 ..     662     769 .. 0.93
   8 ?    3.0   0.1      0.19   1.2e+02      13      69 ..     918     975 ..     906     987 .. 0.86
   9 ?    6.1   0.0      0.02        13      23      65 ..     994    1040 ..     978    1055 .. 0.69
  10 ?    0.7   0.2      0.96   6.1e+02      47      75 ..    1112    1140 ..    1058    1147 .. 0.65
  11 ?   -0.5   0.0       2.3   1.5e+03      55      81 ..    1162    1188 ..    1140    1189 .. 0.73
  12 ?    0.5   0.0       1.1   7.2e+02      31      70 ..    1171    1211 ..    1165    1214 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0061
                TT-HHHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHH CS
      ANAPC3  2 qnnyknAiflaerllaaetespedayllAlclylngqykrAyellrka.kln 52
                +++y++ i  +e++l+ ++e++++  +l+ ++ ++++  +A + +++a +l+
  EPX73542.1 29 TKDYEETITQCEKALSFDSENYNAYVFLGVAYSSLNKEPEAKKAYQNAiELD 80
                5789*****************************9999777777776665555 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 2.6
                 T-HHHHHHHHHHHH..............HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT CS
      ANAPC3   3 nnyknAiflaerll.............aaetespedayllAlclylngqykrAyellrka 49 
                 ++y+nAi l ++ l             +  +  ++++  lA+ + ++++ ++++++++k+
  EPX73542.1  71 KAYQNAIELDDKPLlawqglwnlqeklKDIQGLHQSTEVLAYKFMEANESEKCLNFVNKY 130
                 677888887777777777777777655588899999999999999999999999999887 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.025
                 HHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHH CS
      ANAPC3  43 yellrka.klnskslgcrylfAqcllkLkkyeeAia 77 
                 + +l+++ ++ ++sl +  ++ q ++ Lk+y +A++
  EPX73542.1 367 LSILSQSyQECPQSLLITEVYTQYCVYLKEYSDAVQ 402
                 6789999999************************87 PP

  == domain 4  score: 14.6 bits;  conditional E-value: 4.6e-05
                 HHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHH CS
      ANAPC3   8 AiflaerllaaetespedayllAlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAia 77 
                 A+ l+ ++la  +++++++  lA +  +n+qy  A + l++  ++n+++  c+  +  c++ L+ +++A  
  EPX73542.1 449 AEELYKKVLAHVPNNYSALIGLAGVQMENEQYSDAAQTLENVlRENPED-PCLSQLSWCYYMLGDLDKAME 518
                 5555566665666666666667777777777777777777774444444.377777777777776666654 PP

  == domain 5  score: 16.6 bits;  conditional E-value: 1.1e-05
                 HTT-HHHHHHHHHHHH.HHH--HHH..HHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-H CS
      ANAPC3   1 dqnnyknAiflaerllaaetesped..ayllAlclylngqykrAyellrka.klnskslgcrylfAqcllkLkky 72 
                 ++++y +A   +e +l   +e+ped  +  l+ c+y +g+ ++A+e ++++ ++   + +    +A++++  + y
  EPX73542.1 476 ENEQYSDAAQTLENVL---RENPEDpcLSQLSWCYYMLGDLDKAMEQVQTClQILQGNTKNKPALAEAYYRFGIY 547
                 689*************...999999656669********************999988888888888888877666 PP

  == domain 6  score: 2.4 bits;  conditional E-value: 0.29
                 HHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHH CS
      ANAPC3  28 llAlclylngqykrAyellrka.klnskslgcrylfAq 64 
                  l++ + +  +  rA++ ++ka +l+ +   ++  +A+
  EPX73542.1 580 ELGYYYRNVHDISRAMKCFQKAfELEASQTDAAEELAK 617
                 46666666666677777766666665555555444444 PP

  == domain 7  score: 13.8 bits;  conditional E-value: 8.2e-05
                 -HHHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-H CS
      ANAPC3   4 nyknAiflaerllaaetespedayllAlclylngqykrAyellrka.klnskslgcrylfAqcllkLkky 72 
                 +y +A+  ++r+ a ++++ + +y+ +     +g+++ A+e l++  + +++ + +++++A+++l L+ky
  EPX73542.1 699 RYISALKAFNRASALDPNDWYTRYFIGSIQKDMGDFENAMETLSSVlQGRPSEICVLLCLAETSLRLSKY 768
                 6788999999999999999999************************99999999999999*******999 PP

  == domain 8  score: 3.0 bits;  conditional E-value: 0.19
                 HHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHT CS
      ANAPC3  13 erllaaetespedayllAlclylngqykrAyellrka.klnskslgcrylfAqcllkL 69 
                   + + e+++++   +l+  l +++    A++ + +a ++n++++ +++ ++  +l++
  EPX73542.1 918 KQAIKLEPKNNNFWCMLGVLLSNSSSIRAAQHCFIQAlQINERDIDVWVNYGALCLQI 975
                 4555788999999999************************************999986 PP

  == domain 9  score: 6.1 bits;  conditional E-value: 0.02
                  HHHHHH..HHHHHHHTT-HHHHHHHHHCT.SHHHC-H.HHHHHHHHH CS
      ANAPC3   23 pedayl..lAlclylngqykrAyellrka.klnsksl.gcrylfAqc 65  
                  ++++ +  +A+c  ++g++++  + l+ a ++ + ++  + y +A +
  EPX73542.1  994 DNSRAWlgYAYCSISTGDHEKTVQALQHAfEISGGNIrDVNYWYASA 1040
                  344455237*******************9888877776555655555 PP

  == domain 10  score: 0.7 bits;  conditional E-value: 0.96
                  HCTSHHHC-HHHHHHHHHHHHHTT-HHHH CS
      ANAPC3   47 rkaklnskslgcrylfAqcllkLkkyeeA 75  
                  ++ +  +k   +   +A+ +l L+k+ee 
  EPX73542.1 1112 ESVGALEKYVDAKGQLARLCLRLNKFEES 1140
                  33333455566666789999999999986 PP

  == domain 11  score: -0.5 bits;  conditional E-value: 2.3
                  -HHHHHHHHHHHHHTT-HHHHHHHH-S CS
      ANAPC3   55 slgcrylfAqcllkLkkyeeAiaaLek 81  
                  s g  ++++ +++ L+++e+ ++++ek
  EPX73542.1 1162 SVGLNLTCGLAAYFLGNLEQSLQHFEK 1188
                  3477788999**************997 PP

  == domain 12  score: 0.5 bits;  conditional E-value: 1.1
                  HHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT CS
      ANAPC3   31 lclylngqykrAyellrka.klnskslgcrylfAqcllkLk 70  
                  l+ y +g+ ++ ++ ++k+ +l ++++ + +l A++l +L+
  EPX73542.1 1171 LAAYFLGNLEQSLQHFEKSlELGESHPDVVVLVAKVLWALG 1211
                  56666777788888888888999999999999999888776 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0      0.03        19       3      28 ..      53      78 ..      51      80 .. 0.86
   2 ?    0.6   0.0       1.7   1.1e+03       5      32 ..     434     462 ..     431     463 .. 0.85
   3 ?    6.9   0.0     0.017        11       6      32 ..     470     496 ..     465     497 .. 0.78
   4 ?    7.6   0.0      0.01       6.5       5      21 ..     502     518 ..     499     526 .. 0.84
   5 ?   -0.5   0.0       3.9   2.5e+03       6      26 ..     581     601 ..     580     604 .. 0.84
   6 ?    0.9   0.0       1.4   9.1e+02      11      32 ..     661     682 ..     655     683 .. 0.82
   7 ?    3.7   0.1      0.18   1.1e+02       6      32 ..     690     716 ..     689     717 .. 0.88
   8 ?    6.0   0.0     0.034        22       4      31 ..     722     749 ..     719     750 .. 0.85
   9 ?    2.4   0.0      0.46   2.9e+02       2      24 ..     998    1020 ..     997    1022 .. 0.89
  10 ?   -1.7   0.0       9.3     6e+03       8      25 ..    1171    1188 ..    1170    1191 .. 0.79
  11 ?   -0.9   0.0       5.5   3.5e+03      14      32 ..    1214    1232 ..    1203    1233 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.03
                HHHHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6  3 lyklalsyrklgdtdkAlealerlik 28
                +  l+ +y +l++  +A++a+++ i+
  EPX73542.1 53 YVFLGVAYSSLNKEPEAKKAYQNAIE 78
                55689*****98999********997 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 1.7
                 HHHHHHHHHHHHH.HHHHHHHHHHHH-TT CS
       TPR_6   5 klalsyrklgdtd.kAlealerlikeYPd 32 
                  +++sy++  ++  +A e++++++   P+
  EPX73542.1 434 AIGYSYYEVPRYIlQAEELYKKVLAHVPN 462
                 589999998888899********998887 PP

  == domain 3  score: 6.9 bits;  conditional E-value: 0.017
                 HHHHHHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6   6 lalsyrklgdtdkAlealerlikeYPd 32 
                 la  + +  ++++A ++le++++e P+
  EPX73542.1 470 LAGVQMENEQYSDAAQTLENVLRENPE 496
                 554555544***************996 PP

  == domain 4  score: 7.6 bits;  conditional E-value: 0.01
                 HHHHHHHHHHHHHHHHH CS
       TPR_6   5 klalsyrklgdtdkAle 21 
                 +l ++y++lgd dkA+e
  EPX73542.1 502 QLSWCYYMLGDLDKAME 518
                 689*****99*****98 PP

  == domain 5  score: -0.5 bits;  conditional E-value: 3.9
                 HHHHHHH.HHHHHHHHHHHHHH CS
       TPR_6   6 lalsyrk.lgdtdkAlealerl 26 
                 l++ yr+   d ++A++ +++ 
  EPX73542.1 581 LGYYYRNvH-DISRAMKCFQKA 601
                 677788888.999*******85 PP

  == domain 6  score: 0.9 bits;  conditional E-value: 1.4
                 HHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6  11 rklgdtdkAlealerlikeYPd 32 
                 +  ++ ++A+  ++  ++ +P+
  EPX73542.1 661 LHSKNFQNAIVHFQAALRIFPK 682
                 5546999**************7 PP

  == domain 7  score: 3.7 bits;  conditional E-value: 0.18
                 HHHHHHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6   6 lalsyrklgdtdkAlealerlikeYPd 32 
                 l+++y + g++  Al+a++r     P+
  EPX73542.1 690 LGEAYARSGRYISALKAFNRASALDPN 716
                 89*****77**********99877776 PP

  == domain 8  score: 6.0 bits;  conditional E-value: 0.034
                 HHHHHHHHHHHHHHHHHHHHHHHHHH-T CS
       TPR_6   4 yklalsyrklgdtdkAlealerlikeYP 31 
                 y ++  ++ +gd ++A+e+l ++++  P
  EPX73542.1 722 YFIGSIQKDMGDFENAMETLSSVLQGRP 749
                 6688899999************998666 PP

  == domain 9  score: 2.4 bits;  conditional E-value: 0.46
                  HHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6    2 AlyklalsyrklgdtdkAleale 24  
                  A +  a++ +++gd++k ++al+
  EPX73542.1  998 AWLGYAYCSISTGDHEKTVQALQ 1020
                  7788999999989********98 PP

  == domain 10  score: -1.7 bits;  conditional E-value: 9.3
                  HHHHHHHHHHHHHHHHHH CS
       TPR_6    8 lsyrklgdtdkAlealer 25  
                  l+ + lg+ +++l+ +e+
  EPX73542.1 1171 LAAYFLGNLEQSLQHFEK 1188
                  5666677******99997 PP

  == domain 11  score: -0.9 bits;  conditional E-value: 5.5
                  HHHHHHHHHHHHHHHH-TT CS
       TPR_6   14 gdtdkAlealerlikeYPd 32  
                  + +++A+e l ++ +++P+
  EPX73542.1 1214 TGKQAAREQLLSVTEQHPE 1232
                  57889*************7 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.0     0.012       7.8       1      32 [.      52      83 ..      52      86 .. 0.89
   2 ?   -0.4   0.0       2.3   1.5e+03      17      27 ..     448     458 ..     448     464 .. 0.79
   3 ?    3.9   0.0       0.1        67       1      34 [.     466     497 ..     466     498 .. 0.88
   4 ?   -1.9   0.1       7.1   4.5e+03       1      20 [.     499     518 ..     499     528 .. 0.77
   5 ?    2.8   0.1      0.22   1.4e+02       1      32 [.     577     608 ..     577     612 .. 0.81
   6 ?    0.6   0.0       1.2   7.5e+02       4      27 ..     655     678 ..     653     685 .. 0.82
   7 !    7.3   0.0    0.0085       5.4       1      34 [.     686     717 ..     686     717 .. 0.90
   8 ?    4.9   0.0     0.048        31       4      22 ..     723     741 ..     720     751 .. 0.82
   9 ?   -1.9   0.0       7.3   4.7e+03      18      32 ..     913     925 ..     913     928 .. 0.78
  10 ?    2.8   0.0      0.23   1.5e+02       4      18 ..    1126    1140 ..    1125    1148 .. 0.91
  11 ?    2.6   0.0      0.26   1.7e+02      12      29 ..    1176    1193 ..    1168    1199 .. 0.85

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.012
       TPR_7  1 aLlnLarlysrlGdyeeAielyeqsLaltkdp 32
                a++ L+++ys+l++  eA + y+ +++l++ p
  EPX73542.1 52 AYVFLGVAYSSLNKEPEAKKAYQNAIELDDKP 83
                7999********************88887766 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 2.3
       TPR_7  17 eAielyeqsLa 27 
                 +A+ely+++La
  EPX73542.1 448 QAEELYKKVLA 458
                 79******665 PP

  == domain 3  score: 3.9 bits;  conditional E-value: 0.1
       TPR_7   1 aLlnLarlysrlGdyeeAielyeqsLaltkdped 34 
                 aL  La ++ +  +y++A++ +e   +l++ ped
  EPX73542.1 466 ALIGLAGVQMENEQYSDAAQTLEN--VLRENPED 497
                 577799999999************..99999987 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 7.1
       TPR_7   1 aLlnLarlysrlGdyeeAie 20 
                 +L++L  +y  lGd ++A e
  EPX73542.1 499 CLSQLSWCYYMLGDLDKAME 518
                 577788888889*****987 PP

  == domain 5  score: 2.8 bits;  conditional E-value: 0.22
       TPR_7   1 aLlnLarlysrlGdyeeAielyeqsLaltkdp 32 
                 ++  L+  y+++ d ++A ++++++ +l+ ++
  EPX73542.1 577 TYTELGYYYRNVHDISRAMKCFQKAFELEASQ 608
                 5788999*****************55555555 PP

  == domain 6  score: 0.6 bits;  conditional E-value: 1.2
       TPR_7   4 nLarlysrlGdyeeAielyeqsLa 27 
                  L++ +    ++++Ai +++++L+
  EPX73542.1 655 SLGVFQLHSKNFQNAIVHFQAALR 678
                 5888888999***********765 PP

  == domain 7  score: 7.3 bits;  conditional E-value: 0.0085
       TPR_7   1 aLlnLarlysrlGdyeeAielyeqsLaltkdped 34 
                 +++ L+++y r G+y  A++ + +  a + dp+d
  EPX73542.1 686 CWSGLGEAYARSGRYISALKAFNR--ASALDPND 717
                 6788********************..88888875 PP

  == domain 8  score: 4.9 bits;  conditional E-value: 0.048
       TPR_7   4 nLarlysrlGdyeeAiely 22 
                  +++++ ++Gd+e+A e +
  EPX73542.1 723 FIGSIQKDMGDFENAMETL 741
                 689************9976 PP

  == domain 9  score: -1.9 bits;  conditional E-value: 7.3
       TPR_7  18 AielyeqsLaltkdp 32 
                 Ai++++q  a+  +p
  EPX73542.1 913 AIDCLKQ--AIKLEP 925
                 9******..776665 PP

  == domain 10  score: 2.8 bits;  conditional E-value: 0.23
       TPR_7    4 nLarlysrlGdyeeA 18  
                  +Larl+ rl+++ee 
  EPX73542.1 1126 QLARLCLRLNKFEES 1140
                  79***********96 PP

  == domain 11  score: 2.6 bits;  conditional E-value: 0.26
       TPR_7   12 lGdyeeAielyeqsLalt 29  
                  lG+ e+ ++++e+sL+l 
  EPX73542.1 1176 LGNLEQSLQHFEKSLELG 1193
                  7999*********99875 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.1      0.35   2.2e+02      17      38 ..       8      29 ..       8      37 .. 0.92
   2 ?    4.5   0.0     0.053        34       7      30 ..      55      78 ..      51      79 .. 0.89
   3 ?    4.4   0.0     0.056        36       4      32 ..     499     527 ..     499     528 .. 0.92
   4 !    9.4   0.0    0.0015      0.96       2      30 ..     575     603 ..     574     605 .. 0.95
   5 ?   -1.0   0.0       2.9   1.9e+03       8      31 ..     656     679 ..     655     679 .. 0.90
   6 ?    3.1   0.1      0.15        96       8      28 ..     690     710 ..     688     713 .. 0.87
   7 ?   -0.2   0.0       1.6     1e+03       8      34 ..     934     960 ..     933     960 .. 0.90
   8 ?    3.0   0.0      0.15        98      10      31 ..    1171    1192 ..    1170    1198 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.35
      TPR_10 17 rydeAealleealairrrllGp 38
                +y++A a+++ al + r++l +
  EPX73542.1  8 NYQRAIAMAKPALKAAREALST 29
                799***************9975 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.053
      TPR_10  7 NLanalrqrgrydeAealleeala 30
                 L++a++++++  eA + ++ a++
  EPX73542.1 55 FLGVAYSSLNKEPEAKKAYQNAIE 78
                59******************9998 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.056
      TPR_10   4 slnNLanalrqrgrydeAealleealair 32 
                 +l+ L+  ++ +g++d+A++  + +l+i 
  EPX73542.1 499 CLSQLSWCYYMLGDLDKAMEQVQTCLQIL 527
                 78899999******************985 PP

  == domain 4  score: 9.4 bits;  conditional E-value: 0.0015
      TPR_10   2 AsslnNLanalrqrgrydeAealleeala 30 
                 As+++ L+ ++r++ +  +A++ +++a +
  EPX73542.1 575 ASTYTELGYYYRNVHDISRAMKCFQKAFE 603
                 99************************987 PP

  == domain 5  score: -1.0 bits;  conditional E-value: 2.9
      TPR_10   8 LanalrqrgrydeAealleealai 31 
                 L++   + ++++ A  +++ al+i
  EPX73542.1 656 LGVFQLHSKNFQNAIVHFQAALRI 679
                 888889999************986 PP

  == domain 6  score: 3.1 bits;  conditional E-value: 0.15
      TPR_10   8 LanalrqrgrydeAealleea 28 
                 L+ a+ + gry  A++ + +a
  EPX73542.1 690 LGEAYARSGRYISALKAFNRA 710
                 9*************9987665 PP

  == domain 7  score: -0.2 bits;  conditional E-value: 1.6
      TPR_10   8 LanalrqrgrydeAealleealairrr 34 
                 L+++l++     +A   +++al+i +r
  EPX73542.1 934 LGVLLSNSSSIRAAQHCFIQALQINER 960
                 8999999999999**********9886 PP

  == domain 8  score: 3.0 bits;  conditional E-value: 0.15
      TPR_10   10 nalrqrgrydeAealleealai 31  
                   a + +g+++++++++e++l++
  EPX73542.1 1171 LAAYFLGNLEQSLQHFEKSLEL 1192
                  677889**************97 PP

>> TPR_MalT  MalT-like TPR region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0      0.11        69      11      69 ..      26      79 ..      18     119 .. 0.86
   2 ?    0.5   0.1      0.48   3.1e+02      85     126 ..     502     543 ..     478     546 .. 0.79
   3 ?    3.5   0.0      0.06        39      14     107 ..     663     745 ..     657     759 .. 0.79
   4 ?   -3.2   0.0       6.5   4.1e+03      96     143 ..     910     956 ..     893     964 .. 0.64
   5 !   16.4   0.1   6.9e-06    0.0044       8      81 ..    1128    1204 ..    1126    1238 .. 0.78
   6 ?   -0.3   0.0      0.83   5.3e+02     164     209 ..    1200    1245 ..    1194    1301 .. 0.77

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.11
    TPR_MalT 11 aiasgdaeralelArqALallpeddllariaatavlGeasllqGdleaAlqalqeaekl 69
                a+++ d e++++++++AL++ +e+       a+ +lG a+   ++ ++A +a+q a++l
  EPX73542.1 26 ALSTKDYEETITQCEKALSFDSENY-----NAYVFLGVAYSSLNKEPEAKKAYQNAIEL 79
                689999*************988876.....788999********99********99986 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.48
    TPR_MalT  85 qqaeilvaqGrLheAletyeqalqlateqglqqlplvgfllv 126
                 q++  + + G+L++A+e  +  lq  + +   +  l++ +++
  EPX73542.1 502 QLSWCYYMLGDLDKAMEQVQTCLQILQGNTKNKPALAEAYYR 543
                 566678889999999999999999888777777667776665 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.06
    TPR_MalT  14 sgdaeralelArqALallpeddllariaatavlGeasllqGdleaAlqalqeaeklarqadslhvallallqqaeilvaqGrLheAletyeqal 107
                 s +++ a+ + ++AL ++p+d + +++     lGea+   G+  +Al+a++ a++l      ++ +++ +  ++ i+   G++++A+et    l
  EPX73542.1 663 SKNFQNAIVHFQAALRIFPKDTHCWSG-----LGEAYARSGRYISALKAFNRASALD-----PNDWYTRYF-IGSIQKDMGDFENAMETLSSVL 745
                 78999999999************9987.....699***************9998875.....333334444.5666666677777777776666 PP

  == domain 4  score: -3.2 bits;  conditional E-value: 6.5
    TPR_MalT  96 LheAletyeqalqlateqglqqlplvgfllvlladllyEwndLeeAeq 143
                 L  A++  +qa++l +++    +++ g+ll   + +   ++ + +A q
  EPX73542.1 910 LGVAIDCLKQAIKLEPKNNNF-WCMLGVLLSNSSSIRAAQHCFIQALQ 956
                 667777777887765555444.66666666555555544444444444 PP

  == domain 5  score: 16.4 bits;  conditional E-value: 6.9e-06
    TPR_MalT    8 AllaiasgdaeralelArqALallpeddllar...iaatavlGeasllqGdleaAlqalqeaeklarqadslhvall 81  
                  A l++  +++e+++e+A  AL+l+ e+d  a+   +  +++ G a+   G+le++lq++++  +l  ++  + v + 
  EPX73542.1 1128 ARLCLRLNKFEESSEHASVALDLINEEDNSAKqvsVGLNLTCGLAAYFLGNLEQSLQHFEKSLELGESHPDVVVLVA 1204
                  7889999*******************9999885223346778******************99999877766655322 PP

  == domain 6  score: -0.3 bits;  conditional E-value: 0.83
    TPR_MalT  164 yvllarialaqGdleeAetllekaeelaresnfhvdwlanaeevrv 209 
                   vl a++ +a G   + +++ e++  ++++++ h+d l ++ ++ v
  EPX73542.1 1200 VVLVAKVLWALGSETGKQAAREQLLSVTEQHPEHIDSLVCLGAIGV 1245
                  6889999999999999999999999999999999999888777665 PP

>> PknG_TPR  Protein kinase G tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.18   1.1e+02     180     222 ..     449     491 ..     433     496 .. 0.88
   2 ?   -0.1   0.0      0.47     3e+02     108     172 ..     478     541 ..     458     565 .. 0.69
   3 ?    4.0   0.1     0.026        17     114     159 ..     633     681 ..     587     686 .. 0.78
   4 !   13.8   0.0   2.7e-05     0.017     108     185 ..     698     776 ..     692     786 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.18
                 TT-HHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHHHHHHHTS- CS
    PknG_TPR 180 eekyYrtVwrtdrgvvsAaFGlaRqlaaagdraaAvaaLdeVp 222
                 +e+ Y+ V     +  sA  Gla   +++++ ++A ++L++V 
  EPX73542.1 449 AEELYKKVLAHVPNNYSALIGLAGVQMENEQYSDAAQTLENVL 491
                 5688999999999999***********************9995 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.47
                 T-HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHT-HHHHHHHHHHHHHHSTT-SHHHHHHHHHH CS
    PknG_TPR 108 GdveearelLdeleeeveedWrldWyrglaeLlegdyeeAaaeFdevlaalpGEiaPklaLAata 172
                  + ++a+++L+++ +e++ed  l+   + +  + gd+++A+++ ++ l++l G +  k aLA + 
  EPX73542.1 478 EQYSDAAQTLENVLRENPEDPCLSQ-LSWCYYMLGDLDKAMEQVQTCLQILQGNTKNKPALAEAY 541
                 4556666666666666666655553.345667778889999999999999999988888888665 PP

  == domain 3  score: 4.0 bits;  conditional E-value: 0.026
                 HHHHHHHHHHH---HHHHHHH...HHHHHHHT-HHHHHHHHHHHHHHST CS
    PknG_TPR 114 relLdeleeeveedWrldWyr...glaeLlegdyeeAaaeFdevlaalp 159
                 r++L++ +++ +++ + +W++   g+ +L ++++++A+ +F++ l+++p
  EPX73542.1 633 RRVLSTSQNDLKRKRKFNWHHkslGVFQLHSKNFQNAIVHFQAALRIFP 681
                 66777788888888888888544599******************99998 PP

  == domain 4  score: 13.8 bits;  conditional E-value: 2.7e-05
                 T-HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHT-HHHHHHHHHHHHHHSTT-SHHHHHHHHHHHHHT---.TT-HHH CS
    PknG_TPR 108 GdveearelLdeleeeveedWrldWyrglaeLlegdyeeAaaeFdevlaalpGEiaPklaLAataElagetd.eekyYr 185
                 G   +a + +++ ++  ++dW ++++ g  +  +gd+e+A+++  +vl+  p Ei   l LA t  +  +   ++ yY+
  EPX73542.1 698 GRYISALKAFNRASALDPNDWYTRYFIGSIQKDMGDFENAMETLSSVLQGRPSEICVLLCLAETSLRLSKYYiHHGYYQ 776
                 6667889999999999**********************************************99876655442566776 PP

>> TPR_20  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.0    0.0013      0.82      13      53 ..     455     495 ..     448     534 .. 0.87
   2 ?    4.5   0.0      0.07        45       8      50 ..     704     746 ..     698     751 .. 0.91
   3 ?   -1.5   0.0       5.1   3.3e+03       9      52 ..     915     958 ..     912     963 .. 0.87
   4 ?   -0.7   0.0       2.8   1.8e+03      13      48 ..     987    1022 ..     983    1028 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.0013
      TPR_20  13 aalaanpddldarldlAlallaagryeeAleqLleilkrdr 53 
                 + la  p+++ a + lA +++++++y +A++ L ++l+++ 
  EPX73542.1 455 KVLAHVPNNYSALIGLAGVQMENEQYSDAAQTLENVLRENP 495
                 457889****************************9999886 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.07
      TPR_20   8 laeleaalaanpddldarldlAlallaagryeeAleqLleilk 50 
                 l+++ +a a +p+d  +r+     +   g+ e A+e L ++l+
  EPX73542.1 704 LKAFNRASALDPNDWYTRYFIGSIQKDMGDFENAMETLSSVLQ 746
                 6778889999****************************99997 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 5.1
      TPR_20   9 aeleaalaanpddldarldlAlallaagryeeAleqLleilkrd 52 
                 + l++a++ +p++++  + l  +l   +  ++A   +++ l+ +
  EPX73542.1 915 DCLKQAIKLEPKNNNFWCMLGVLLSNSSSIRAAQHCFIQALQIN 958
                 66899********************9999999998888888876 PP

  == domain 4  score: -0.7 bits;  conditional E-value: 2.8
      TPR_20   13 aalaanpddldarldlAlallaagryeeAleqLlei 48  
                  + +  +pd+  a l +A   ++ g++e+ +++L + 
  EPX73542.1  987 RSISIDPDNSRAWLGYAYCSISTGDHEKTVQALQHA 1022
                  567789*********************999988655 PP

>> Wzy_C_2  Virulence factor membrane-bound polymerase, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.0   6.4e-05     0.041     109     168 ..     463     522 ..     435     534 .. 0.89
   2 ?    5.1   0.1     0.029        19      92     179 ..     636     720 ..     616     723 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 6.4e-05
     Wzy_C_2 109 ayadllelgllplspenlaaklalarklihlsPepavierlilslallGdedeAeqilar 168
                 +y++l  l+ ++++ e++ +  +  +++++  Pe   +++l +++ +lGd d+A  +++ 
  EPX73542.1 463 NYSALIGLAGVQMENEQYSDAAQTLENVLRENPEDPCLSQLSWCYYMLGDLDKAMEQVQT 522
                 6777777788899999***************************************99875 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.029
     Wzy_C_2  92 lrevtnpkvwkdrflfrayadllelgllplspenlaaklalarklihlsPepa.vierlilslallGdedeAeqilararalfpeedak 179
                 l   +n++ +k++f++++ +    lg+++l  +n +  +   +++++ +P+ +   + l +++a +G+   A++   ra al p+++++
  EPX73542.1 636 LSTSQNDLKRKRKFNWHHKS----LGVFQLHSKNFQNAIVHFQAALRIFPKDThCWSGLGEAYARSGRYISALKAFNRASALDPNDWYT 720
                 56667788888889999875....899***********************98725689***********************99998876 PP

>> TPR_22  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.3   0.00047       0.3      60      90 ..     209     239 ..     194     240 .. 0.89
   2 ?   -2.0   0.0       6.3     4e+03      16      76 ..     463     519 ..     449     524 .. 0.68
   3 ?    5.3   0.0     0.033        21      16      58 ..     608     650 ..     603     658 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00047
      TPR_22  60 laWevykdsevdelynqLvnivddDeeRrkl 90 
                 +  e++++s ++++y +++n  +dDe Rr +
  EPX73542.1 209 VEKEIMDNSPIENIYMEIINWSQDDEVRRLT 239
                 55699**********************9966 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 6.3
      TPR_22  16 pqealkkLlkilskkeqeevsklvsrerlklsandpdyqikinslaWevykdsevdelynq 76 
                    al +L  +  ++eq + +  + ++ l+ + +dp     + +l+W  y   ++d+  +q
  EPX73542.1 463 NYSALIGLAGVQMENEQYSDAAQTLENVLRENPEDPC----LSQLSWCYYMLGDLDKAMEQ 519
                 5556666666666666666666666777777777775....67899999999999988887 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.033
      TPR_22  16 pqealkkLlkilskkeqeevsklvsrerlklsandpdyqikin 58 
                  ++a ++L k+ ++ e+ e+ +++sr  l  s+nd + + k n
  EPX73542.1 608 QTDAAEELAKMFAEAEEWELVEVISRRVLSTSQNDLKRKRKFN 650
                 5688999****************************99999988 PP

>> TPR_21  Tetratricopeptide repeat-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.1         1   6.7e+02      79     108 ..      19      48 ..       8      59 .. 0.82
   2 ?    6.2   0.8     0.012       7.7     152     180 ..      56      84 ..      19     102 .. 0.66
   3 !    8.5   0.0    0.0023       1.5      94     142 ..     448     493 ..     441     538 .. 0.74
   4 ?   -1.8   0.1       3.3   2.1e+03      52     116 ..     606     632 ..     582     639 .. 0.55
   5 ?   -2.5   0.0       5.3   3.4e+03      88     106 ..     730     748 ..     723     777 .. 0.69

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 1
      TPR_21  79 aLllAkaaveagdlaaAkaqLewvlekakd 108
                 aL +A++a +++d+++  +q e++l+  ++
  EPX73542.1  19 ALKAAREALSTKDYEETITQCEKALSFDSE 48 
                 7999************99999999876644 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.012
      TPR_21 152 rGDilvaqgkldeAraaYqaAlaaleeka 180
                  G ++++ +k  eA++aYq+A++  ++  
  EPX73542.1  56 LGVAYSSLNKEPEAKKAYQNAIELDDKPL 84 
                 57789999**************9887765 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.0023
      TPR_21  94 aAkaqLewvlekakdeelkalarlRLarvllaekkydeAlktLeakkee 142
                 +A++ +++vl++ +++ ++al+   La v++++++y +A +tLe++ +e
  EPX73542.1 448 QAEELYKKVLAHVPNN-YSALI--GLAGVQMENEQYSDAAQTLENVLRE 493
                 6777888888888776.66665..5899999999999999999987665 PP

  == domain 4  score: -1.8 bits;  conditional E-value: 3.3
      TPR_21  52 akdaakakeaaeeladeyggtaYaalaaLllAkaaveagdlaaAkaqLewvlekakdeelkalar 116
                 a+++                                      +A+++L ++ ++a++ el ++++
  EPX73542.1 606 ASQT--------------------------------------DAAEELAKMFAEAEEWELVEVIS 632
                 2222......................................34445555555555555555555 PP

  == domain 5  score: -2.5 bits;  conditional E-value: 5.3
      TPR_21  88 eagdlaaAkaqLewvleka 106
                 + gd+++A ++L++vl+  
  EPX73542.1 730 DMGDFENAMETLSSVLQGR 748
                 4566666666666666655 PP

>> TPR_4  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0      0.32   2.1e+02       4      23 ..     500     519 ..     498     522 .. 0.85
   2 ?    4.2   0.0      0.14        90       3      20 ..     686     703 ..     684     706 .. 0.85
   3 ?    0.0   0.0         3     2e+03       6      19 ..    1126    1139 ..    1122    1144 .. 0.83
   4 ?    2.6   0.0      0.43   2.8e+02       7      25 ..    1169    1187 ..    1167    1188 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.32
       TPR_4   4 llaLArallalGdldeAral 23 
                 l+ L + ++ lGdld A + 
  EPX73542.1 500 LSQLSWCYYMLGDLDKAMEQ 519
                 788999**********9765 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.14
       TPR_4   3 allaLArallalGdldeA 20 
                 + ++L++a+++ G++  A
  EPX73542.1 686 CWSGLGEAYARSGRYISA 703
                 6789**********8666 PP

  == domain 3  score: 0.0 bits;  conditional E-value: 3
       TPR_4    6 aLArallalGdlde 19  
                   LAr++l+l  ++e
  EPX73542.1 1126 QLARLCLRLNKFEE 1139
                  79*******99998 PP

  == domain 4  score: 2.6 bits;  conditional E-value: 0.43
       TPR_4    7 LArallalGdldeAralle 25  
                   + a++ lG+l++ ++++e
  EPX73542.1 1169 CGLAAYFLGNLEQSLQHFE 1187
                  5889************998 PP

>> SHNi-TPR  SHNi-TPR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.1    0.0011      0.71       7      22 ..     470     485 ..     466     489 .. 0.88
   2 ?   -0.1   0.0      0.99   6.3e+02      13      30 ..     662     679 ..     655     679 .. 0.87
   3 ?   -0.0   0.0      0.95   6.1e+02      18      33 ..    1180    1195 ..    1177    1197 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0011
    SHNi-TPR   7 LGEislEnenFpqAve 22 
                 L+ + +Ene++++A++
  EPX73542.1 470 LAGVQMENEQYSDAAQ 485
                 99************98 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.99
    SHNi-TPR  13 EnenFpqAveDlrkaLeL 30 
                  + nF  A+  +++aL +
  EPX73542.1 662 HSKNFQNAIVHFQAALRI 679
                 577************975 PP

  == domain 3  score: -0.0 bits;  conditional E-value: 0.95
    SHNi-TPR   18 pqAveDlrkaLeLreq 33  
                  +q ++ ++k+LeL e+
  EPX73542.1 1180 EQSLQHFEKSLELGES 1195
                  799999******9666 PP

>> Ribosomal_L36e  Ribosomal protein L36e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   5.2e-05     0.033      21      74 ..     189     243 ..     181     249 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 5.2e-05
  Ribosomal_L36e  21 lrpsrrkgrltkr.tkfvrdiirevaGfapyerrvmellkvskdKralKfaKkrl 74 
                        ++rk+rl  r  ++vrd+ +e++  +p+e   me++  s+d  +++++  +l
      EPX73542.1 189 REINKRKNRLGARlDQVVRDVEKEIMDNSPIENIYMEIINWSQDDEVRRLTETKL 243
                     455678888888834789******************************9998776 PP

>> BTAD  Bacterial transcriptional activator domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.1      0.34   2.2e+02      70     122 ..      24      76 ..      13      84 .. 0.74
   2 ?    5.1   0.1     0.046        29      68     128 ..     470     529 ..     461     542 .. 0.85
   3 ?    9.6   0.1    0.0018       1.1      72     123 ..     660     711 ..     590     714 .. 0.81
   4 ?   -2.4   0.1       9.2   5.9e+03      98     127 ..    1099    1128 ..    1087    1148 .. 0.76
   5 ?   -0.5   0.1       2.4   1.6e+03      61     115 ..    1273    1327 ..    1269    1330 .. 0.86

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.34
                 HHHHHTT-HHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHTT-HHHHHHHHHHH CS
        BTAD  70 eaelrlGraeealaelealvaehPlrErlhrqlmrAlarsGrqaeALevYerl 122
                 ++ l+  ++ee +++ e++++ +  + +++  l  A+  ++++ eA ++Y+++
  EPX73542.1  24 REALSTKDYEETITQCEKALSFDSENYNAYVFLGVAYSSLNKEPEAKKAYQNA 76 
                 34556667778888888888888888888888888888888888888888876 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.046
                 HHHHHHHTT-HHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
        BTAD  68 laeaelrlGraeealaelealvaehPlrErlhrqlmrAlarsGrqaeALevYerlrrlLae 128
                 la  +++ +++++a+++le+ ++e+P +     ql  +++ +G+  +A+e+ +++ ++L+ 
  EPX73542.1 470 LAGVQMENEQYSDAAQTLENVLRENPED-PCLSQLSWCYYMLGDLDKAMEQVQTCLQILQG 529
                 566677888999**************75.88899********************9999975 PP

  == domain 3  score: 9.6 bits;  conditional E-value: 0.0018
                 HHHTT-HHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHTT-HHHHHHHHHHHH CS
        BTAD  72 elrlGraeealaelealvaehPlrErlhrqlmrAlarsGrqaeALevYerlr 123
                 +l+    ++a+   +a+++  P +   +  l +A+arsGr   AL++++r+ 
  EPX73542.1 660 QLHSKNFQNAIVHFQAALRIFPKDTHCWSGLGEAYARSGRYISALKAFNRAS 711
                 55556677889999***********************************985 PP

  == domain 4  score: -2.4 bits;  conditional E-value: 9.2
                  HHHHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
        BTAD   98 lhrqlmrAlarsGrqaeALevYerlrrlLa 127 
                    +ql++  +   +   ALe+Y +++ +La
  EPX73542.1 1099 VLCQLLEKEYDATESVGALEKYVDAKGQLA 1128
                  456777777777777778888877777776 PP

  == domain 5  score: -0.5 bits;  conditional E-value: 2.4
                  HHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHTT-HHHH CS
        BTAD   61 rlealealaeaelrlGraeealaelealvaehPlrErlhrqlmrAlarsGrqaeA 115 
                   l+++e+l+++++   + +e++a l ++++ hP   +++ +l++  + s   a+A
  EPX73542.1 1273 TLSVVEKLLAMLTMAYDPKELQALLLQQLYIHPDAATTWSLLIEQRYTSPAIATA 1327
                  6889999999999999999**************9999999999988877777666 PP

>> HrpB1_HrpK  Bacterial type III secretion protein (HrpB1_HrpK)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.1   0.00054      0.35      42      94 ..     461     512 ..     445     525 .. 0.79
   2 ?   -1.2   0.0       2.3   1.5e+03      39      78 ..     712     751 ..     697     759 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00054
  HrpB1_HrpK  42 PevaeldllegvlliergrweeAlrlLreveaeasgtpyakaLlAlcLaalrD 94 
                 P++  + +  + +++e++++++A+++L++v  e+++ p  +  l++c ++l+D
  EPX73542.1 461 PNNYSALIGLAGVQMENEQYSDAAQTLENVLRENPEDPCLSQ-LSWCYYMLGD 512
                 555555555667899****************88888776666.5899999998 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 2.3
  HrpB1_HrpK  39 vLrPevaeldllegvlliergrweeAlrlLreveaeasgt 78 
                 +L P+    + + g ++   g++e+A+ +L++v + ++++
  EPX73542.1 712 ALDPNDWYTRYFIGSIQKDMGDFENAMETLSSVLQGRPSE 751
                 577777788888889999999***********99887765 PP

>> SGTA_dimer  Homodimerisation domain of SGTA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.2     0.079        50      33      53 ..     594     614 ..     590     621 .. 0.85
   2 ?    6.1   0.0     0.015       9.3      30      48 ..     910     928 ..     909     931 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.079
  SGTA_dimer  33 AiqCIaeaFevdkedkaavkk 53 
                 A+ C + aFe++ ++++a+++
  EPX73542.1 594 AMKCFQKAFELEASQTDAAEE 614
                 99**********999888764 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.015
  SGTA_dimer  30 leVAiqCIaeaFevdkedk 48 
                 l VAi+C+++a +++++++
  EPX73542.1 910 LGVAIDCLKQAIKLEPKNN 928
                 56*************9986 PP

>> HEPN  HEPN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.4    0.0046       2.9       3      35 ..      11      43 ..       9      45 .. 0.90
   2 ?   -0.8   0.0       2.6   1.6e+03      73     117 ..      93     136 ..      82     137 .. 0.80
   3 ?   -2.2   0.0       6.8   4.3e+03      45      86 ..     580     621 ..     576     625 .. 0.68
   4 ?    1.5   0.1      0.48   3.1e+02       8      37 ..     759     788 ..     754     790 .. 0.91

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0046
                HHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHH CS
        HEPN  3 ewlrrAeedleaAellleegdydlacfhaqqaa 35
                + + +A+  l+aA+++l+++dy+ ++  ++ a+
  EPX73542.1 11 RAIAMAKPALKAAREALSTKDYEETITQCEKAL 43
                66789************************9986 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 2.6
                 HHHHHHHHHCCCHHCCCTSS--S--HHHHHHHHHHHHHHHHHHHH CS
        HEPN  73 lreeleeLekayiesrYpdakeeyteedaeealkdaeevlelvee 117
                 l+e+l+ ++ + + +   ++k+  + ++ e++l+++ + l lv+e
  EPX73542.1  93 LQEKLKDIQGLHQSTEVLAYKFM-EANESEKCLNFVNKYLSLVRE 136
                 56777777777777777788885.999999999999998888765 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 6.8
                 HTT--.SSCCHHHHHHCCHHHT...-HHHHHHHHHHHCCCHH CS
        HEPN  45 kkggeppkthdlreLleelkkelkeseelreeleeLekayie 86 
                 ++g+ +   hd+++ ++  +k  + + +  + +eeL k+  e
  EPX73542.1 580 ELGYYYRNVHDISRAMKCFQKAFELEASQTDAAEELAKMFAE 621
                 677778889999999995555554477777777777666554 PP

  == domain 4  score: 1.5 bits;  conditional E-value: 0.48
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
        HEPN   8 AeedleaAellleegdydlacfhaqqaaek 37 
                 Ae  l+ +++ +++g+y  ++ ++q  +e 
  EPX73542.1 759 AETSLRLSKYYIHHGYYQRSALASQKTIEV 788
                 9999*********************99996 PP

>> DUF3856  Domain of Unknown Function (DUF3856)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.1      0.16     1e+02       5      39 ..      12      46 ..       9      87 .. 0.75
   2 ?   -1.0   0.0       2.6   1.6e+03       2      34 ..     456     489 ..     455     494 .. 0.78
   3 ?   -2.3   0.0       6.4   4.1e+03      57      83 ..     499     525 ..     497     534 .. 0.85
   4 ?    3.5   0.2      0.11        69      42      94 ..     550     607 ..     532     626 .. 0.78
   5 ?    4.8   0.0     0.042        27      54      81 ..     683     710 ..     673     733 .. 0.91
   6 ?   -1.0   0.0       2.6   1.7e+03      61      88 ..    1127    1154 ..    1121    1194 .. 0.64

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.16
                HHHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHHH CS
     DUF3856  5 evaeaylalseaekqleegayeeaaasyrkalevs 39
                 +a+a  al  a + l+ + yee+  +++kal + 
  EPX73542.1 12 AIAMAKPALKAAREALSTKDYEETITQCEKALSFD 46
                57778888999999999999999999999998763 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 2.6
                 HHHHHHHHHHHH.HHHHHHHHHT-HHHHHHHHHH CS
     DUF3856   2 Plkevaeaylal.seaekqleegayeeaaasyrk 34 
                  l +v + y al   a  q+e+++y++aa+  ++
  EPX73542.1 456 VLAHVPNNYSALiGLAGVQMENEQYSDAAQTLEN 489
                 577888888887346899**********998765 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 6.4
                 HHHHHHHHHHHTT-HHHHHHHHHHHHH CS
     DUF3856  57 chaglsealaklgrydealesadkalr 83 
                 c + ls  +  lg+ d+a+e ++++l+
  EPX73542.1 499 CLSQLSWCYYMLGDLDKAMEQVQTCLQ 525
                 67789999999******9999999887 PP

  == domain 4  score: 3.5 bits;  conditional E-value: 0.11
                 S-TTS---HHHHHHH.....HHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHH--TTST CS
     DUF3856  42 ipaeeafdheGfdal.....chaglsealaklgrydealesadkalryfnrrGeleqd 94 
                  ++ e ++ + f a+     c   +++++++lg y   ++ + +a++ f +  ele  
  EPX73542.1 550 KSKIENYEEKSFAAFvsslrCEPNFASTYTELGYYYRNVHDISRAMKCFQKAFELEAS 607
                 455677777777777333334567899************************9999865 PP

  == domain 5  score: 4.8 bits;  conditional E-value: 0.042
                 HHHHHHHHHHHHHHTT-HHHHHHHHHHH CS
     DUF3856  54 dalchaglsealaklgrydealesadka 81 
                 d+ c++gl ea+a+ gry +al++ ++a
  EPX73542.1 683 DTHCWSGLGEAYARSGRYISALKAFNRA 710
                 788*******************998876 PP

  == domain 6  score: -1.0 bits;  conditional E-value: 2.6
                  HHHHHHHTT-HHHHHHHHHHHHHHHHHH CS
     DUF3856   61 lsealaklgrydealesadkalryfnrr 88  
                  l+   ++l +++e+ e a  al   n  
  EPX73542.1 1127 LARLCLRLNKFEESSEHASVALDLINEE 1154
                  6777788999999999999999888853 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1397 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       790  (0.0440627); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        67  (0.00373696); expected 17.9 (0.001)
Passed Fwd filter:                        29  (0.00161749); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              28  [number of targets reported over threshold]
# CPU time: 1.15u 0.36s 00:00:01.50 Elapsed: 00:00:00.66
# Mc/sec: 6393.98
//
Query:       EPX73543.1  [L=636]
Description: SNARE binding protein Sly1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   6.7e-128  428.4   2.8   7.8e-128  428.2   2.8    1.0  1  Sec1      Sec1 family


Domain annotation for each model (and alignments):
>> Sec1  Sec1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  428.2   2.8  4.4e-132  7.8e-128       1     575 []      47     631 ..      47     631 .. 0.87

  Alignments for each domain:
  == domain 1  score: 428.2 bits;  conditional E-value: 4.4e-132
                 EEEEE-HHHHHHHHTT--HHHHHTTTEE...ETT..T--S-.....BTTSEEEEEE-S-HHHHHHHHHHHHSS-SBS-EEEEESS---HHHHHHHHH.. CS
        Sec1   1 KvLvlDkelskilssvlkvsdlleegVt...kieklkkrepskrealphlkaiyflrptkenidrlakdfisarrykeyhifftprlseslleglakad 96 
                 KvL++Dk+ s+ +ssv++ s+l+++gVt   +i+  + r+p     + +++aiyf++pt+eni+ +++d  s+  y +++++f++++++slle++a+ +
  EPX73543.1  47 KVLIFDKSGSDTISSVMRISELRKHGVTvhmNIT--SSRQP-----IADVPAIYFVQPTEENIEYIIND-LSKGLYESAYVCFSSSIPRSLLEKFAELA 137
                 9***************************766555..58999.....*********************86.5669*******************666655 PP

                 .SG.....GGGEEEEE----SEEEETTEEE-STTHHHHSTTG.....GG.......--HHHHHHHHHHHHHHH-..--EEEE.-TT-HHHHHHHH.... CS
        Sec1  97 .ee....vvkkvklkelnldfvplesdlfslnpelplsfrdlyldndnsaleeeieslldriakgLlsvllslekkiPiiry.kgsaasmvakkladel 189
                  ++    ++++v+  +++l++v+lesd+fsl  +lp  f + +   ++s+ ++ ie+ ++++++ L+sv+++l ++iPiir+ +gsaa+ va+kl+++l
  EPX73543.1 138 sKSntshMINQVY--DQYLNYVVLESDFFSL--QLPRVFHTIH---SPSSDDALIENTIQSTTNRLFSVIVTL-GTIPIIRCpQGSAAELVARKLNQRL 228
                 33246679*****..****************..6666666655...55566779*******************.99*********************** PP

                 .......HHHHTTT--SS--EEEEE-GGG-SSTTTS---BHHHHHHHHS--BTEEEEEE--SS...SEEEEEE--TT..-TTHHHHTTSBHHHHHHHHH CS
        Sec1 190 kekids.kknfesessrqrpvLiIlDRsvDlvtpllhqwTYqaliddllgglnnnnvvleeep...keekeaelvesssDeffaelrhlnfgevgeklk 284
                 k+++ + k+ f+  +++ rp+Li+lDR+vDlv+++ h+wTYqali+d l+  +++n+v+ e++   k++k++++++  sD f++ + +++f+ev+e+++
  EPX73543.1 229 KDHLMNtKDAFNTLNPKIRPLLILLDRTVDLVPMINHSWTYQALIHDTLN--MHLNRVTMETSnegKTSKQSYDLNG-SDYFWEANANKPFPEVAENID 324
                 *****977777777***********************************9..8999999999999999999999999.********************* PP

                 HHHHHHHHHH.HTTT....-..........TTHHHHHHHHHH-GGGHHHHHHHHHHHHHHHHHHHHS-HHH.HHHHHHHHHHHHSS--.B--..-HHHH CS
        Sec1 285 keakeyqeen.ekkrn.gak..........esiadlkkfvaklpelqeekkklskHtnlaeellkevkkrkldellelEqdlatgesdkkikekkviee 371
                 +e+ +y++++ e++r+ ga+          ++ a lk +v+ lpel+++k+ l++H+++a+++lk +k+r+ld+++++E+++  g     +k  + i++
  EPX73543.1 325 EELTRYKNDAnEITRRsGASsleefnadafTDSAYLKTAVSLLPELTARKQLLDMHMSIATAILKAIKERHLDDFFQMEDNIT-GL----NK--SAILS 416
                 ***************9887799999999999999************************************************3.32....22..4599* PP

                 HHHH.-TTS-H.HHHHHHHHHHHH...-B.-HT--GG....GGHHHHG...GGGG........---.BGGG-------...............------ CS
        Sec1 372 liad.deptseledklRLlllyslvegglkekelkellrelvqsalyg...leylktlrsleklgllkkrkgkksskkkss........lklikeeede 458
                 +++d d++t   edklR +++++l  + +++ +l++++++lv++   +   l+++k++r+++k+++l   +++++   ++s        ++l+++ +d+
  EPX73543.1 417 CLNDkDKGT--PEDKLRFFIIWYLSVDAVPSTDLQAYEEALVNNG-CNleaLNFVKRVREITKMTML--ASSTTRPVANQSgdnifggfSSLSSKFTDR 510
                 ***944444..36************6699999*******999966.665557788888888888888..44444444444488******9999999999 PP

                 ---S..........TT-----H.....HHHHHHHHTTT-S-TTTS-BSS-GGGS--------------------------S-EEEEEEEEEE-HHHHHH CS
        Sec1 459 esnyd.......lsgvsryaPl.....lvrlvealikgkklssespslskkdpsqeesssslrsakktnsaskesaekkkkqrviVffvGGvTysEira 545
                  ++ +       +sgv++ +P      +  +v++l++ + +ss s+++++  +  ++    ++s ++++++++++++    +++iV+++GG++y E+ +
  EPX73543.1 511 FKEAGiggleniISGVKNLIPFrkdgtISSIVQSLMD-PGSSSVSKQTES--YLIFD---PKASYASNDPRNMNKRQI--FNEAIVCVLGGGNYLEYGN 601
                 99999********************************.666665554433..33333...334444444444444444..445**************** PP

                 HHHHT...TSSSEEEEEEEEE--HHHHHH. CS
        Sec1 546 lrllskqekknkeiiigttsilnpksflee 575
                 l  ++k+++ +k i++g+t++ +p++f++e
  EPX73543.1 602 LMAWAKEQNPPKHITYGSTDVQSPSQFMNE 631
                 *****988788****************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (636 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       709  (0.0395449); expected 358.6 (0.02)
Passed bias filter:                      535  (0.0298399); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.75u 0.33s 00:00:01.08 Elapsed: 00:00:00.53
# Mc/sec: 3580.89
//
Query:       EPX73544.1  [L=725]
Description: mRNA cleavage and polyadenylation specificity factor complex associated protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.026   14.0   0.1      0.048   13.1   0.1    1.4  1  SBP_bac_3  Bacterial extracellular solute-binding proteins, f
      0.057   12.4   0.0        0.1   11.6   0.0    1.4  1  Sif        Sif protein


Domain annotation for each model (and alignments):
>> SBP_bac_3  Bacterial extracellular solute-binding proteins, family 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   5.4e-06     0.048      68     143 ..     335     406 ..     328     414 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 5.4e-06
                 --HHHHTTEEEESESEEEEEEEEEEETTSHGTCCHSSCGCGTTSEEEEETTSHHHHHHHHHHHCTSEEEEESSHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   SBP_bac_3  68 itpeReekvdFsqpyfsagqvllvrkkdaskissiksladLkgkkvgvqagstaeellkeelkkgaeivefdtlee 143
                 i++eR + v F +p++  + + +        ++  + l+dL++k+v+v  g  + + +++e  k ++++++ + + 
  EPX73544.1 335 ISAERLADVKFGKPILIVKKKSANSV----IRQHAERLSDLAEKSVAVELGKDHTKDAEKESNKPVTAKTVTNANV 406
                 899*********99886655444333....223345667************9999999997766444444444443 PP

>> Sif  Sif protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   1.1e-05       0.1      28      71 ..     301     346 ..     273     366 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 1.1e-05
         Sif  28 kvlwerlkdfffstgkakadsylheml..fadspptrerladiffe 71 
                 k++  +l+++f s+ ++k+d+++h +l  ++  p + erlad+ f 
  EPX73544.1 301 KLFLPKLRNWFVSAIRSKSDKVIHSILllLCKLPISAERLADVKFG 346
                 6667899*****************97522678899*******9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (725 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1120  (0.0624686); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.74u 0.34s 00:00:01.08 Elapsed: 00:00:00.52
# Mc/sec: 4172.31
//
Query:       EPX73545.1  [L=570]
Description: CAMK/CAMKL/AMPK protein kinase Ssp2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.7e-74  249.4   0.0    5.7e-74  248.8   0.0    1.3  1  Pkinase          Protein kinase domain
    6.2e-40  136.3   0.0    1.3e-39  135.2   0.0    1.6  1  AdenylateSensor  Adenylate sensor of SNF1-like protein kinase
    3.4e-39  134.7   0.0    6.4e-39  133.8   0.0    1.4  1  Pkinase_Tyr      Protein tyrosine kinase
    9.7e-10   38.4   0.3    2.1e-09   37.4   0.3    1.6  1  UBA_2            Ubiquitin associated domain (UBA)
    1.3e-07   31.2   0.0    5.6e-07   29.2   0.0    1.9  2  Kinase-like      Kinase-like
    0.00021   21.0   0.3    0.00072   19.2   0.1    1.8  2  RIO1             RIO1 family
     0.0022   16.9   0.1     0.0033   16.3   0.1    1.2  1  YukC             WXG100 protein secretion system (Wss), prote
     0.0046   15.9   0.2      0.009   15.0   0.2    1.5  1  Haspin_kinase    Haspin like kinase domain
  ------ inclusion threshold ------
      0.059   12.7   0.9        0.2   11.0   0.9    1.8  1  Kdo              Lipopolysaccharide kinase (Kdo/WaaP) family
       0.15   12.0   0.0       0.34   10.8   0.0    1.6  1  APH              Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  248.8   0.0   3.2e-77   5.7e-74       1     264 []      26     277 ..      26     277 .. 0.92

  Alignments for each domain:
  == domain 1  score: 248.8 bits;  conditional E-value: 3.2e-77
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HH CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslsee 98 
                 y+ +e+lGeGsfGkV  a++ +t+++vA+K i+++  kk++   +v rEi++lk l+hp+i++ly+v+++++++++v ey+  gel+d++ +++ ++e+
  EPX73545.1  26 YVMKETLGEGSFGKVKLATHYKTHQKVALKFISRQLLKKSDMyMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAG-GELFDYIVENKRMTED 123
                 67789****************************99988877779************************************98.67************** PP

                 HHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHHTTSCB.SHHHHHHHHHHHHHHHHHSS-S CS
     Pkinase  99 eakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelessskltsfvgtseYlAPEvlkeney.skkvDvWslGvilyelltgkpp 196
                 e +++++qi+ ++ey+H+++i+HrDlKpeN+L+d+k ++Ki+DFGl++ ++ ++ l++ +g+++Y APEv++++ y +++vDvWs+G++ly +l g+ p
  EPX73545.1 124 EGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDKLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYaGPEVDVWSCGIVLYVMLVGRLP 222
                 ***********************************************************************999999********************** PP

                 TTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 197 fsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 f     +e +  +l +     k+   ++  +  ++ +s+ a++l+++++  dp++R+t++e+ q+p++
  EPX73545.1 223 FD----DE-FIPNLFK-----KV---NNCIYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRQDPWF 277
                 **....33.3333333.....22...22344557778******************************8 PP

>> AdenylateSensor  Adenylate sensor of SNF1-like protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.2   0.0   7.4e-43   1.3e-39       1     117 []     442     567 ..     442     567 .. 0.93

  Alignments for each domain:
  == domain 1  score: 135.2 bits;  conditional E-value: 7.4e-43
                      SEEESEEEES-HHHHHHHHHHHHHHTTEEE----......-GGGGEEEEEEE-HHHHHTT--EEEEEEEEEEEEETTEEEEEEEEEEEEESS.S CS
  AdenylateSensor   1 rWhfGirsrsypldvlgeiyralknlGaewakPs......eeelwtikvrwkykkaekenkedlmkleiqlfqlepnnylvdfkfdGwesss.s 87 
                      rWhfG+r+r+++ ++l ++yral+++Ga+++ P       +++++tik+ w++++++ke++++++++e+ql++++p++y++d+k++G+++ s +
       EPX73545.1 442 RWHFGVRCRGDAPEILLAVYRALQRAGAQFTVPVqhngkyKSDMYTIKSIWEIPHCRKEGRKVYAYVELQLYEVMPDCYMLDVKSNGYKDFSrP 535
                      8********************************99999999************************************************75523 PP

                      SS..TTTTTSSTTS---STTHHHHHHHHHHHH CS
  AdenylateSensor  88 ek..eetaeededevssayPflhlatrlilel 117
                       +  +   +++ed+++s++Pfl+l+++l+++l
       EPX73545.1 536 GDygTAVPDHEEDDLKSSFPFLDLCATLVCKL 567
                      33346777899999****************97 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.8   0.0   3.6e-42   6.4e-39       3     257 ..      28     273 ..      26     274 .. 0.88

  Alignments for each domain:
  == domain 1  score: 133.8 bits;  conditional E-value: 3.6e-42
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHH..HHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateee..keelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkeke 98 
                  ++++lGeG+fGkV  +t +    k+++kVa+K ++++  +++    ++ +e++ +k l+hp+i+kl+ v+t    +++v+ey+ gG+L +++ ++  +
   EPX73545.1  28 MKETLGEGSFGKVKLATHY----KTHQKVALKFISRQLLKKSdmYMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEN--K 118
                  689**************99....999********8876655423566778*******************************96.89********9..9 PP

                  TSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEE.HHHHHHHHHHHH CS
  Pkinase_Tyr  99 kltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkft.sksDvWsfGvll 195
                  ++t ++  +f +q+ +++ey +++k+vHrdl   N Ll+++  vki+DfGL++ + +d +   k+++  + ++ apE+++ k +   + DvWs G++l
   EPX73545.1 119 RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDKLNVKIADFGLSNIM-TDGNFL-KTSC-GSPNYAAPEVINGKLYAgPEVDVWSCGIVL 213
                  9***************************************************987.444444.4444.4569***********87369********** PP

                  HHHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 196 wEiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfselve 257
                  + ++  g+ p+ +    ++++k+++     +p+  ++  ++l+++   +dp +R t++e+++
   EPX73545.1 214 YVMLV-GRLPFDDEFIPNLFKKVNN-CIYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRQ 273
                  *7776.*****99988888888865.5567789999*********************99976 PP

>> UBA_2  Ubiquitin associated domain (UBA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.4   0.3   1.2e-12   2.1e-09       5      46 .]     300     337 ..     297     337 .. 0.96

  Alignments for each domain:
  == domain 1  score: 37.4 bits;  conditional E-value: 1.2e-12
       UBA_2   5 vvsaLsktMGYdkdeIieaLekaekskssneIkDAYlLmkEN 46 
                 +vs+L ++MGY  d I+e+L+++ ++    e k+AY L++EN
  EPX73545.1 300 IVSKLGDAMGYPEDYIYESLRSESNN----ELKEAYELLHEN 337
                 8*********************9999....***********9 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.45     8e+02      15      90 ..      27     100 ..      20     105 .. 0.66
   2 !   29.2   0.0   3.1e-10   5.6e-07     146     253 ..     126     226 ..      98     265 .. 0.79

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.45
  Kinase-like  15 vrgellkkgdrsvvfevkdqetgeplavkvfllpseaskkdlerlkeqelairllrgknpeqAkdhlrlllpfdlv 90 
                  v +e l++g +++v +++  +t +++a+k  + +    +  + r++++   ++ll  + p+  k +  +  p d+v
   EPX73545.1  27 VMKETLGEGSFGKVKLATHYKTHQKVALKFISRQLLKKSDMYMRVEREISYLKLL--RHPHIIKLYDVITTPTDIV 100
                  7789999999999999999999999999876655544444455554444333333..3455555555555555555 PP

  == domain 2  score: 29.2 bits;  conditional E-value: 3.1e-10
  Kinase-like 146 rlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggf..taLvragtkvvlsevekgfaPpEllgsrggytrknktkmthkldaWqlGlviy 241
                  r     q+i  + + + + +vh +++++nllld k  +++ +f  ++++++g+  + s     +a pE+++         k+    ++d+W  G+v y
   EPX73545.1 126 RRFF-QQIICAIEYCHRHKIVHRDLKPENLLLDDKLNVKIADFglSNIMTDGNFLKTSCGSPNYAAPEVING--------KLYAGPEVDVWSCGIVLY 214
                  5555.5788889999**************************9844689******9999999*********99........4557789*********** PP

  Kinase-like 242 riwclklPltla 253
                   +    lP++  
   EPX73545.1 215 VMLVGRLPFDDE 226
                  *********964 PP

>> RIO1  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.1     4e-07   0.00072      44     150 ..      60     168 ..      32     177 .. 0.77
   2 ?   -1.5   0.0      0.91   1.6e+03      79     104 ..     412     437 ..     404     446 .. 0.78

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 4e-07
                 GS-HHHHHHHHHHHHHHHHHHHHHTT.--S--EEEEETT.EEEEE--EETTEEGGBHHHCG.-.HHHHHHHHHHHHHHHHHHHHTSTEEESS-STTSEE CS
        RIO1  44 ktnprklvklwaekEfrnLkrleeag.vpvPkpielkrh.vlvmefigedgvaapklkdve.e.eeeaeelyeevleemrklykeaglvHaDLSeyNvl 138
                 +  +++ + + +e+E+++Lk l++ + ++  ++i+   + v+v e+ g  g     + + + + e+e ++ +++++ ++    +++++vH DL   N+l
  EPX73545.1  60 QLLKKSDMYMRVEREISYLKLLRHPHiIKLYDVITTPTDiVMVIEYAG--GELFDYIVENKrMtEDEGRRFFQQIICAI-EYCHRHKIVHRDLKPENLL 155
                 344455567889**********98876999999999776256899999..66555555555456999*********965.5556*************** PP

                 EETT.EEEE--GT CS
        RIO1 139 vded.kvviIDvs 150
                 +d++ +v i D++
  EPX73545.1 156 LDDKlNVKIADFG 168
                 ***9999999986 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.91
                 ETTEEEEE--EETTEEGGBHHHCG-H CS
        RIO1  79 krhvlvmefigedgvaapklkdveee 104
                 +++ lvm+ +++ +++a+ l+  +++
  EPX73545.1 412 ENNQLVMKTLSDANNEAALLQTGKKK 437
                 67899******999999888877743 PP

>> YukC  WXG100 protein secretion system (Wss), protein YukC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.1   1.8e-06    0.0033       1     108 [.      62     175 ..      62     181 .. 0.78

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 1.8e-06
                 EEGGGS-GGGGGGGGGGGS.--TTB--E..EEEE-SS.EEEEEE---TTSEEGGGGGGS-HHHHHHHHHH.GGGGGG.GGGSSEE---SGGGEEE-TTS CS
        YukC   1 lkkskiklknllelellkk.ekplllpk..eieeeed.evkityqlekkllsfeeikkkekkeklrlaln.ikalee.llssrltlilhPeNlvfdknl 93 
                 lkks++ ++ ++e+ +lk   +p++++    i+   d  ++i+y   +      e k++++ e  r+ ++ i a+e  + ++ ++  l+PeNl++d++l
  EPX73545.1  62 LKKSDMYMRVEREISYLKLlRHPHIIKLydVITTPTDiVMVIEYAGGELFDYIVENKRMTEDEGRRFFQQiICAIEYcHRHKIVHRDLKPENLLLDDKL 160
                 6888888888888888875267787765224555555145688888888888888999999999999999899998724556689************** PP

                 -EEES--EETTTBS- CS
        YukC  94 epkilhrgvkeslpp 108
                 ++ki+  g+ +++ +
  EPX73545.1 161 NVKIADFGLSNIMTD 175
                 **********99865 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.2     5e-06     0.009     184     257 ..      97     173 ..      27     182 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 5e-06
  Haspin_kinase 184 lflvlllkdkGtdLeev..klksw..kqalsifwqivkiLyvaEtkfeFEHRdLhldniLvdknlnvtlidlklsRle 257
                      +v++++++G +L     + k +  ++  + f qi+  +     + +  HRdL+ +n L+d++lnv + d+ ls + 
     EPX73545.1  97 TDIVMVIEYAGGELFDYivENKRMteDEGRRFFQQIICAIE-YCHRHKIVHRDLKPENLLLDDKLNVKIADFGLSNIM 173
                    45666777777777665343333311233455555555444.44688999**********************999875 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.9   0.00011       0.2     107     155 ..     112     160 ..      29     174 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00011
         Kdo 107 dllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqee 155
                 d++ + +++ e   r+ ++++  +i+  hr ++ H+dl + n+ll+ + 
  EPX73545.1 112 DYIVENKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDKL 160
                 555555567788889999***************************9875 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00019      0.34     167     195 ..     143     169 ..     124     174 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00019
                 EEE-SS-SGGGEEEC..TTEEEEE---TT CS
         APH 167 vllHgDlhpgNllvdpddgrvtGviDfed 195
                  ++H+Dl+p Nll+d+  +    + Df++
  EPX73545.1 143 KIVHRDLKPENLLLDDKLNVK--IADFGL 169
                 58*************443333..667766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (570 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       478  (0.0266607); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.68u 0.33s 00:00:01.01 Elapsed: 00:00:00.52
# Mc/sec: 3307.85
//
Query:       EPX73546.1  [L=919]
Description: nucleoporin Npp106 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.5e-165  551.5   0.1   3.1e-165  551.2   0.1    1.1  1  Nic96     Nup93/Nic96
  ------ inclusion threshold ------
      0.045   13.0   0.3      0.078   12.3   0.3    1.3  1  Gcn1_N    Generalcontrol nonderepressible 1 (Gcn1) N-terminal


Domain annotation for each model (and alignments):
>> Nic96  Nup93/Nic96
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  551.2   0.1  3.4e-169  3.1e-165       4     621 .]     279     906 ..     276     906 .. 0.94

  Alignments for each domain:
  == domain 1  score: 551.2 bits;  conditional E-value: 3.4e-169
                 HHHHHHHHHHHHH...T..........TTTS--.-..........HHHHHHHHHHHHHHHHHHHHHCC....CTTSSSS-HHHHHHHHHHCTTBESSSC CS
       Nic96   4 kdkqlleaWkllkelvgekpe......vkerefaksrqsaelrkrivegarryLEkqfleyveeliaknpreaqlggvpsvvnkvraFvrvrlakknla 96 
                 +  qll+aW+ll+++v+ek++        ++++ k+  + +++k+i++g+ r+LE qfl +v++++++    + +  + + ++k+  + r+r+ k n++
  EPX73546.1 279 EYPQLLDAWSLLAYMVDEKSNnvhafeATTSNADKTDVNPSFQKNIIHGSLRFLEVQFLAFVDAQLSD----NGHVSSTKPLDKMITYTRLRFFK-NNS 372
                 5689****************999998866777778999******************************....566699999************65.66* PP

                 BSSTT--EETTEEHHHHHHHHHTTT-HHHHHHHHHHTGGGS-TTTTHHHHHHHHCTTTTSS---TCCCHHHHHHHHHHTTT.-TTS-HHHHHHHHHHHT CS
       Nic96  97 edaglldevngeplWaliyylLRaGdldeAlevvnenkeafrkldrsfaaylkayassedrrlpseleerlkleYnqrirnasedsDpykkavYkiigr 195
                 + +++ ++ ++ p+Wa+++yl+RaG+ld Ale+v++n   f+++ rsf++y++aya+++++ lp++l++rl++eY+q +++a+e  Dp+k+a+Yk++g+
  EPX73546.1 373 WVKPTISIADDIPIWAVLFYLMRAGLLDIALEFVTTNAGVFENFGRSFPSYFNAYAKNPHQPLPKQLRDRLQAEYAQLMKYAPE--DPFKHAIYKLLGQ 469
                 ************************************************************************************..************* PP

                 --CCC-S-T.TC--SHHHHHHHHHHH---TTS.....SSSS.SS----HHHHHHHHHHH-GGGCTT-......HHHHHHHTT-HHHHHHHHHTT-HHHH CS
       Nic96 196 cdlsrknlhqevaktieDwlWlqLslireddr.....dsselasekytledLqklilkyGeshFnas.eqpllYfqvllLtgqFEaAieylyresrvdA 288
                 c+++r +l+ ev+ t eD++W+qL+++r +++     + +++  ++++l++Lqk+i+ +G+++Fn++ ++p+ +f +ll++g+FE+A++yly++ +v+A
  EPX73546.1 470 CEPHRISLP-EVCITSEDYMWMQLMFCRANANnfvtsNLDQPPVNNFDLQQLQKKIIAFGPRYFNPKnSTPVNFFLALLICGEFERAVNYLYTFYPVEA 567
                 *********.********************9988877556777777******************99989999*************************** PP

                 HHHHHHHHHTT------....------..-------HHHHHHHHHHTTTTT-HHHHHHHHHGGGGS-S...CCHHHHHHHHHHHHHHHH--HHHHHEEE CS
       Nic96 289 VHlAIaLaeygLLrvsdskvseellsveteskrrinfarligqYtrkfeatdprealeYlylirllkdlegkeqrelchealrelvletrefalLLGdi 387
                  H AIa+++ygLL++++ +++e++l++e+es  rin+ +li +Y+ ++ ++d+ + l+Y+++i+l+++++     ++c+++++ ++l++++f+++LGdi
  EPX73546.1 568 THYAIAMSYYGLLHTCNYEKNENILIHEAES-VRINYPQLIVAYIGYLVSVDTLVYLDYIACISLVSSYK-----TCCMNLVKIMLLQSHDFSKFLGDI 660
                 ****************************988.**********************************9864.....6*********************** PP

                 -TTS-EEE-HHHHTGGGGT-SSSSHHHHHHHHHHHHHHHHCT-HHHHHHHHHHTT-HHHHHHHHHHHHHHHHHCSSSSSSSST....TT........TS CS
       Nic96 388 rsdGtripGlieerlkliklddeeeflkkiieqaAreaeekgrledAilLydlageydkvlellnrlLsqvlstqplkprsererlqqe........ed 478
                 r+d++r++Gl++ +l+l+ +d+++  l++++ + Ar+a+++gr+ d+ilLy+l g+yd+v+ +  ++Ls+++ ++ l+ ++++e+++++         +
  EPX73546.1 661 RKDTERTTGLLDLYLPLVPFDQTS--LQALYAEGARNADDDGRYGDSILLYHLLGDYDTVIGVAVKNLSKSIISRGLWMAESQEQSHEKsspnvvanGA 757
                 ********************9888..**********************************************997777777776666667777888889 PP

                 HHHHHHHHHHHHTTSHHHHTTS-HHHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHTT-S--......-HHH.....HHHHHHCGCCS-HHHHTTHHH CS
       Nic96 479 pveLaekileryesnakisekvsaknretcelLldlleifdlyeagqweealdeiekldllPl......aegdl..eevrekveefkslseevakvipd 569
                 p  La+++le+yesn + s kvs+ n+++c+lLl ++++++ly  ++w+e+l+ei+k+d+lPl      a++++    +r+k++ + +ls+e+++++p 
  EPX73546.1 758 PDVLARSLLEIYESNPEKSIKVSTLNKDMCKLLLLVMDARSLYDREEWQEVLSEIAKMDILPLdgslehAHETInsLYLRQKAHDLLTLSPEIVNIVPF 856
                 *****************999*******************************************9988874444422678******************** PP

                 HHHHHHHHHHHHHHHHHSTT--.-TTHHHHHHHHHHHHHHHHHHHHHGCCCS- CS
       Nic96 570 lLlatmtclskqyeqlknkqfe.seskedkleelrqkakalmtfagmikyrmP 621
                 lL ++m+++++++++l   +++ +e++ + l +l+ +a++l+++++mi+ r+P
  EPX73546.1 857 LLFMAMSSIKALFTRL---HYNpTEAEDNLLTSLKFIASNLVMYSTMIEHRLP 906
                 ****************...67767888889*********************99 PP

>> Gcn1_N  Generalcontrol nonderepressible 1 (Gcn1) N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.3   8.7e-06     0.078     261     330 ..     727     793 ..     717     808 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 8.7e-06
      Gcn1_N 261 vskviiealwswlesleeaekdsaavlaktenenLslvlkaiclspaeklgkdvdeevlekqlvellVla 330
                  +++i  +lw   ++++++ek+s +v+a+ + + L++ l  i +   ++ +k+++ ++l+k +++ll l 
  EPX73546.1 727 SKSIISRGLWMAESQEQSHEKSSPNVVANGAPDVLARSLLEIYE---SNPEKSIKVSTLNKDMCKLLLLV 793
                 4678889*********************999999********99...666789*************9885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (919 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       527  (0.0293937); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.76u 0.33s 00:00:01.09 Elapsed: 00:00:00.50
# Mc/sec: 5553.60
//
Query:       EPX73547.1  [L=220]
Description: hypothetical protein SOCG_02769 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.056   12.0   0.3      0.077   11.5   0.3    1.1  1  UPF0560   Uncharacterised protein family UPF0560


Domain annotation for each model (and alignments):
>> UPF0560  Uncharacterised protein family UPF0560
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.3   4.3e-06     0.077     642     718 ..      31     108 ..      26     119 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 4.3e-06
     UPF0560 642 pHPrAWFvsLDGRsnahvRHsYidlqragknssndasldsgvdlneaksgrrgreek.kerkekeskkaaeakayskl 718
                 p  r WF+ +D +s  +     +dl ++++n+s    l+s vd+ +  s+rr+ + +   rk++++ k  ea++y  l
  EPX73547.1  31 PLERDWFLGIDNKSQNKKSKPDVDLSSTDTNGSSLPKLNSDVDIADRLSERRKESLRfDGRKKEKTPKLLEAEEYNTL 108
                 56699************99***************************99999986665444444455566666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       530  (0.029561); expected 358.6 (0.02)
Passed bias filter:                      326  (0.0181828); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.28s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 1434.33
//
Query:       EPX73548.1  [L=641]
Description: heat shock protein S [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   1.2e-260  865.8   5.8   1.4e-260  865.7   5.8    1.0  1  HSP70           Hsp70 protein
    6.5e-17   61.3   0.2    6.6e-16   58.0   0.1    2.1  2  MreB_Mbl        MreB/Mbl protein
    4.4e-05   23.3   0.0    0.00014   21.6   0.0    1.9  2  FGGY_C          FGGY family of carbohydrate kinases, C-termin
  ------ inclusion threshold ------
      0.033   13.4   1.1      0.066   12.5   0.2    1.9  2  Hydantoinase_A  Hydantoinase/oxoprolinase
      0.045   13.2   0.4      0.096   12.1   0.0    1.6  2  Ppx-GppA        Ppx/GppA phosphatase family
       0.23   11.3   5.1        1.1    9.0   0.1    2.4  2  PIN_8           PIN like domain


Domain annotation for each model (and alignments):
>> HSP70  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  865.7   5.8  4.7e-264  1.4e-260       1     599 []       4     610 ..       4     610 .. 0.98

  Alignments for each domain:
  == domain 1  score: 865.7 bits;  conditional E-value: 4.7e-264
                 EEEEEEXSSEEEEEEEETTEEEEEXXTTSXSSEESEEEEXTTSEEETHHHHHCTTTTGGGEEEXGGGTTTXBTTSHHHHHHHTTXSSEEEEETTSBEEE CS
       HSP70   1 viGiDLGttnsvvavmeggkievianeegnrttPsvvaFtkkerlvGeaAkrqavtnpkntvfsvKrliGrkfsdpevqkeikelpykvvkkengkavv 99 
                 +iGiDLGtt+s+v+ + ++++e+ian++gnrttPs+v+Ft++erl+G+aAk+q+++np+nt+f++KrliGr+f+d+evq+++k++p+kv  k ngk+v+
  EPX73548.1   4 AIGIDLGTTYSCVGQFSNNRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRNFDDAEVQSDMKHWPFKVIPK-NGKPVL 101
                 59****************************************************************************************99.****** PP

                 EEEETTE..EEEHHHHHHHHHHHHHHHHHHHHTSBEEEEEEEEXTTXXHHHHHHHHHHHHHTTXEEEEEEEHHHHHHHHHHTCCSS.SCEEEEEEEEXS CS
       HSP70 100 eveaage..kftpeqisamvLkklketaeaylgkkvtdavitvPaYfndaqRqatkdAgkiAGLnvlRivNepTAaalaYGldkkd.kernvlvyDlGg 195
                 eve++ge   ftpe+is+mvL+k++etaeaylg kvtdav+tvPaYfnd+qRqatkdAg+iAG+nvlRi+NepTAaa+aYGld++   e+nvl++DlGg
  EPX73548.1 102 EVEFKGEkkVFTPEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGTIAGMNVLRIINEPTAAAIAYGLDRNTtGESNVLIFDLGG 200
                 *****99999*************************************************************************988799********** PP

                 SXEEEEEEEEETTEEEEEEEEEETTXSHHHHHHHHHHHHHHHHHHHHSXXGGGSHHHHHHHHHHHHHHHHHTTTSSCSEEEEEEEEEETTTEEEEEEEE CS
       HSP70 196 gtfdvSilelekGvfevkaTagDthlGGedfDealvehlveefkkkegidlskdkkalqrlkeaaekaKkeLSsskqteinleietvdedgkdlsekls 294
                 gtfdvS+l++e+G+fevk+TagDthlGGedfD++lv+h+++efk+k++ d+s + +a++rl++a+e+aK++LSs  ++++++ei+++ e g d+ ++++
  EPX73548.1 201 GTFDVSLLTIEEGIFEVKSTAGDTHLGGEDFDSRLVNHFMQEFKRKNKKDISGNARAVRRLRTACERAKRTLSS--SAQASIEIDSMYE-GIDFYTSIT 296
                 **************************************************************************..899999*******.********* PP

                 HHHHHHHHHHHHHHTHHHHHHHHHHCTEEGGGCSEEEEESGGGGSHHHHHHHHHHTT.CHHBSSSHTTTHHHHHHHHHHHHHCTC..GCSHCCEEEEBE CS
       HSP70 295 RakfeelvedllertlepvekalkdaklkkeeidevvlvGGstRiPkvqelvkelfg.kepsktvnpDeavaiGAAvqagvlsge..eevkdllllDvt 390
                 Ra+feel++dl+++t+epve++l+dak +k+ ++e+vlvGGstRiP++q+lv+++f+ kep+k++npDeava+GAAvqa+vl+g+  e+++dllllDv 
  EPX73548.1 297 RARFEELCADLFRNTMEPVERVLRDAKADKSSVNEIVLVGGSTRIPRIQKLVSDFFNgKEPCKSINPDEAVAYGAAVQAAVLTGDtsEKTQDLLLLDVA 395
                 ********************************************************99**************************977899********* PP

                 SS-EEEEETTTEEEEEESTTCBSSEEEEEEEEESSTTSSSEEEEEEESSSSBGGGSEEEEEEEEECESSCSTTCSEEEEEEEEETTSCEEEEEEETTTC CS
       HSP70 391 pLslgietlggvmtkliernttiptkksqvfstaadnqtaveievlqgerelvkdnkllgsfeldgippaprGvpqieVtfdidanGiltvsakdketg 489
                 pLs+giet+ggvmt li+rnttiptkks+vfst++dnq+ v i+v++ger+ +kd++llg+fel+gippaprGvpqieVtfd+danGil+vsa +k+tg
  EPX73548.1 396 PLSMGIETAGGVMTPLIKRNTTIPTKKSEVFSTYSDNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTG 494
                 *************************************************************************************************** PP

                 CEEEEEEECCSS.SBHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH..GGGSTHHHH....HHHHHHHHHHHCHTTSSCHHHHHH CS
       HSP70 490 keeeitieaseg.lseeeiekmvkdaeesaeedkkkkeaieakneaeelvyslekkleee..aekvseaek....ekvesaieeLkeeleeeekeeiea 581
                 k+++iti++++g ls+eei++mv dae++++ed++++++i+akn++e+++ysl++++++   ++k+++++k    ++v+++ie+L++++ ++ k+e+ea
  EPX73548.1 495 KTQKITITNDKGrLSKEEIDRMVADAEKYKAEDEAEAARIQAKNHLESYAYSLRNSMDDPnlKDKIEASDKesidKAVKETIEWLDNNT-TAAKDEYEA 592
                 ************9*********************************************99999****99998999999999****9996.7889***** PP

                 HHHHHHHHHHHHHHHHHH CS
       HSP70 582 kteelkkvvekiaeklye 599
                 k++el+ v+++i++k+y+
  EPX73548.1 593 KQKELEGVANPIMAKVYQ 610
                 **************9986 PP

>> MreB_Mbl  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.05   1.5e+02       2      16 ..       3      19 ..       2      65 .. 0.67
   2 !   58.0   0.1   2.2e-19   6.6e-16      92     316 ..     136     372 ..     113     380 .. 0.80

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.05
                SEEEEEE-SSEEEE..E CS
    MreB_Mbl  2 kdlgiDLGtantlv..y 16
                k +giDLGt+   v  +
  EPX73548.1  3 KAIGIDLGTTYSCVgqF 19
                789*******9988433 PP

  == domain 2  score: 58.0 bits;  conditional E-value: 2.2e-19
                 S--EEEEEE-SS--HHHHHHHHHHHHHTT-SEEEEEEHHHHHHHHTT--..TTSSS-EEEEEE-SS-EEEEEEETT.EEEEEEE....ES-SHHHHHHH CS
    MreB_Mbl  92 skprvvicvPsgiteverrAvkeaakkaGarevllieeplaAAiGaglp..veepsgnmvvdiGggttevavislg.givtsks....vrvaGdeldea 183
                 + +  v++vP   ++ +r+A k+a + aG +   +i+ep aAAi  gl+   +  s  ++ d+Gggt +v+++++  gi + ks     +++G+++d+ 
  EPX73548.1 136 KVTDAVVTVPAYFNDSQRQATKDAGTIAGMNVLRIINEPTAAAIAYGLDrnTTGESNVLIFDLGGGTFDVSLLTIEeGIFEVKStagdTHLGGEDFDSR 234
                 456789**************************************88887114556677999*************85378877773333589******** PP

                 HHHHHHHHHS.....EE--.HHHHHHHHHHH-BSS--HHHH.EEEEEEEETTTTCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHHHHHH CS
    MreB_Mbl 184 iikyirkkyn.....lliG.ertaekikieigsavkeeeee.kmeikGrdlvtglpkevevsseevrealkepvsaiveavkevLektppeLaadivdr 275
                 ++++  ++++      + G  r +++++++   a+ + +++ + +i+   + +g+   ++++ ++ +e  ++ +++ +e v++vL++++++ ++    +
  EPX73548.1 235 LVNHFMQEFKrknkkDISGnARAVRRLRTACERAKRTLSSSaQASIEIDSMYEGIDFYTSITRARFEELCADLFRNTMEPVERVLRDAKADKSS---VN 330
                 *998866664111112334145667888888888877766679999999****************************************99876...58 PP

                 -EEEESGGGGSBTHHHHHHHHHSS-EEE.-SSTTTHHHHHHH CS
    MreB_Mbl 276 givltGGgallkgldkllseetglpvkv.aedpltcvakGtg 316
                  ivl+GG++ +  ++kl+s+ ++ +  + + +p ++va G++
  EPX73548.1 331 EIVLVGGSTRIPRIQKLVSDFFNGKEPCkSINPDEAVAYGAA 372
                 8******************99876654415688888888876 PP

>> FGGY_C  FGGY family of carbohydrate kinases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   4.7e-08   0.00014     136     196 ..     316     377 ..     241     379 .. 0.76
   2 ?   -2.8   0.0       1.5   4.5e+03      48      70 ..     573     595 ..     570     614 .. 0.55

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 4.7e-08
      FGGY_C 136 railealekdsgkpldrlavdGGgskndllmqllAdilg..vpVerpktaeatalGaAilAav 196
                   +l+  ++ +++ +++++++GG ++ + +++l  d ++   p +   ++ea+a GaA+ Aav
  EPX73548.1 316 ERVLRDAKA-DKSSVNEIVLVGGSTRIPRIQKLVSDFFNgkEPCKSINPDEAVAYGAAVQAAV 377
                 223333344.5999***************************9*******************98 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.5
      FGGY_C  48 gslvawlldnlglreeirdagev 70 
                 +++++wl +n  ++++  +a+++
  EPX73548.1 573 KETIEWLDNNTTAAKDEYEAKQK 595
                 67889999997444433333333 PP

>> Hydantoinase_A  Hydantoinase/oxoprolinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       1.3     4e+03      80     104 ..       3      27 ..       2      35 .. 0.84
   2 ?   12.5   0.2   2.2e-05     0.066      55      99 ..     167     211 ..     119     231 .. 0.80

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 1.3
  Hydantoinase_A  80 kvItfDmGGTstDvslikdgevevs 104
                     k+I++D+G T   v ++++++ve+ 
      EPX73548.1   3 KAIGIDLGTTYSCVGQFSNNRVEII 27 
                     789*******999999999988875 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 2.2e-05
  Hydantoinase_A  55 vetilSGPaaGvvgaaatsklagekkvItfDmGGTstDvslikdg 99 
                     v  i+  P a ++++    +++ge++v+ fD+GG ++Dvsl+   
      EPX73548.1 167 VLRIINEPTAAAIAYGLDRNTTGESNVLIFDLGGGTFDVSLLTIE 211
                     55667778888888887789*******************987644 PP

>> Ppx-GppA  Ppx/GppA phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   3.2e-05     0.096      91     230 ..     170     312 ..     156     333 .. 0.75
   2 ?   -2.7   0.1       1.1   3.2e+03     210     234 ..     505     529 ..     490     576 .. 0.63

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 3.2e-05
                 E-HHHHHHHHHHHHHHHT---SSEEEEEEETTEEEEEEEETTEEEEEEEES--CCHHHHHHSGCCC--HHHHHHHHHHHHHH..CTTTHHHHCCCE.HH CS
    Ppx-GppA  91 isgeeEarliylgvvssllekgrglviDiGGGStElvlgeekevsklvSlplGavrlterfltddpltkeeveaarkaveke..leevkdevkkeg.ew 186
                 i  e  a  i++g+ +++  + ++l+ D+GGG  +++l + +e  + v    G   l  + ++++ ++  + e+ rk  + +   +++++ ++++   +
  EPX73548.1 170 IINEPTAAAIAYGLDRNTTGESNVLIFDLGGGTFDVSLLTIEEGIFEVKSTAGDTHLGGEDFDSRLVNHFMQEFKRKNKKDIsgNARAVRRLRTACeRA 268
                 334445667789999999999999*************99887777777777899999999999996666655555553333344556666666666888 PP

                 CCCCCCCHCCHHCHHHHHHCT.SSCEEEHHHHHHHHHHHCTSSC CS
    Ppx-GppA 187 trlvgtsgtisalaeltelhgekgyeitaeeleeliekllqlkk 230
                 +r++++s   s+  +++ +  +   +it++++eel++ l++ + 
  EPX73548.1 269 KRTLSSSAQASIEIDSMYEGIDFYTSITRARFEELCADLFRNTM 312
                 8999988888887777766665699**************99775 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1.1
                 SCEEEHHHHHHHHHHHCTSSCHHHH CS
    Ppx-GppA 210 gyeitaeeleeliekllqlkkeeel 234
                 ++++++ee+  +++ + + k+e+e+
  EPX73548.1 505 KGRLSKEEIDRMVADAEKYKAEDEA 529
                 3344444444444444444444444 PP

>> PIN_8  PIN like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.1   0.00038       1.1      38     110 ..     237     311 ..     229     342 .. 0.73
   2 ?    2.8   2.0     0.029        88      56     124 ..     530     597 ..     484     615 .. 0.60

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00038
       PIN_8  38 hqvalEfqrnresviskekkayedlekeleklkkaaekkleealkkwakkkald..teelrkelkkqleelkeel 110
                 ++ ++Ef r+ ++ is +++a++ l+++ e +k++++ + ++ ++ ++ ++ +d  t+ +r+++++  ++l +++
  EPX73548.1 237 NHFMQEFKRKNKKDISGNARAVRRLRTACERAKRTLSSSAQASIEIDSMYEGIDfyTSITRARFEELCADLFRNT 311
                 789**********************************99999999999888888774444444444443333333 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.029
       PIN_8  56 kkayedlekeleklkkaaekkleealkkwakkkaldteelrkelkkqleelkeelkaeleelkksskad 124
                 ++a  +++++le+   ++ ++++   + ++k +a d+e + k++k+ +e l++++ a ++e + ++k+ 
  EPX73548.1 530 EAARIQAKNHLESYAYSLRNSMD-DPNLKDKIEASDKESIDKAVKETIEWLDNNTTAAKDEYEAKQKEL 597
                 23333444555555555554222.344444455555777777777777777777744444444444333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (641 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1131  (0.0630822); expected 358.6 (0.02)
Passed bias filter:                      703  (0.0392102); expected 358.6 (0.02)
Passed Vit filter:                        66  (0.00368119); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.79u 0.33s 00:00:01.12 Elapsed: 00:00:00.51
# Mc/sec: 3762.43
//
Query:       EPX73549.1  [L=305]
Description: serine/threonine protein phosphatase Ppe1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.6e-36  126.1   0.0    3.2e-36  125.7   0.0    1.1  1  Metallophos      Calcineurin-like phosphoesterase
  ------ inclusion threshold ------
       0.02   14.6   0.0      0.029   14.0   0.0    1.1  1  Glyco_hydro_65N  Glycosyl hydrolase family 65, N-terminal dom
       0.07   13.6   0.1       0.16   12.5   0.1    1.6  1  STPPase_N        Serine-threonine protein phosphatase N-termi


Domain annotation for each model (and alignments):
>> Metallophos  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.7   0.0   5.4e-40   3.2e-36       2     201 ..      45     236 ..      44     239 .. 0.92

  Alignments for each domain:
  == domain 1  score: 125.7 bits;  conditional E-value: 5.4e-40
                  EEEEEESBTBTTCCTHHHHHHHHHHHH..HHHTTESEEEEESTSSSSS..HHHHHHHHHHHHHHHHTSEEEEEC-TTS........CHHHHHHHHHHH CS
  Metallophos   2 rilvigDlHlalgggqlddllkllddl..lreekpdlvllaGDlvdrg..dlekellellaalvkypipvylllGNHe........gfeeellnkygy 87 
                  +++v+gD+H     gq++dll+l++    l++  +++++  GD+vdrg  +le+ +  ++  + +yp+++ ll+GNHe        gf++e++ kyg+
   EPX73549.1  45 PVTVCGDIH-----GQFYDLLELFRVSgeLPS-TNYIFM--GDFVDRGyfSLET-FTLFMLLKARYPDKITLLRGNHEsrqitqvyGFYDECQTKYGN 133
                  799******.....**********77743444.789999..*******666666.66667777777*******************************9 PP

                  HHHHHHHHEHHHCEEETSEEEEEETTEEEEEEEESE.CEEETHHHHHHHHHHHSCHHHHCC...HHHHHHHHHHTTCSEEEEEESSESSCSSSCSCCH CS
  Metallophos  88 lgifsepwrsdaevfnnlplaslgsgslkvlllhGg.spellvsldklgslnleleapepg...dewlkdlekrekadwvivlgHsplyrgsgylfgd 181
                      +++w+++++vf++l la+++++  k+l++hGg spe   +ld+++ l + +e+p++g   d++++d        +  + ++   +rg+g+lfg+
   EPX73549.1 134 ----ANVWKYCCQVFDFLTLAAIIDN--KILCVHGGlSPEV-RTLDQIRILARAQEIPHEGsfcDLMWSD--------PEDIESWTVSPRGAGWLFGS 216
                  ....889*******************..********99999.****************************........888888888889******** PP

                  HHHHHHHHHTTESEEEEESS CS
  Metallophos 182 ealedllkkygvdlvisGHt 201
                  +++ ++  +++++l+ ++H+
   EPX73549.1 217 KVTGEFSHINDLKLIARAHQ 236
                  *******************7 PP

>> Glyco_hydro_65N  Glycosyl hydrolase family 65, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   4.8e-06     0.029      26      96 ..     108     172 ..     107     175 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 4.8e-06
                      E----TTTT--.-EEETT-EE-T........TSSS-EE----EEEEEEEEETTEE--GGGSEEEEEEEEEE CS
  Glyco_hydro_65N  26 tRgafeeeysdpgtyiaGvYdreiseeanGypeeneelvnlpdwlglrlrvdgeeldldegeildyereLd 96 
                      +Rg++e     + t + G+Yd+   + ++G +++++ ++++ d+l+l   +d++ l +  g ++   r+Ld
       EPX73549.1 108 LRGNHES--R-QITQVYGFYDEC--QTKYGNANVWKYCCQVFDFLTLAAIIDNKILCVH-GGLSPEVRTLD 172
                      5999999..4.59*******999..78**************************777775.45555555555 PP

>> STPPase_N  Serine-threonine protein phosphatase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   2.6e-05      0.16      20      42 ..      14      37 ..       9      39 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 2.6e-05
   STPPase_N 20 vq.LseaEIrqlCakareiFLsQP 42
                +  L e++++ lC +++ei++++ 
  EPX73549.1 14 CKyLPEHQLKRLCEMVKEILMEES 37
                55599****************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (305 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       518  (0.0288917); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.29s 00:00:00.84 Elapsed: 00:00:00.48
# Mc/sec: 1918.26
//
Query:       EPX73550.1  [L=1063]
Description: SIN component scaffold protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.6e-25   86.9  49.8    2.7e-11   43.1   0.3    7.6 11  LRR_8     Leucine rich repeat
    1.6e-24   85.6  60.9    7.7e-08   32.5   0.1    9.8 11  LRR_4     Leucine Rich repeats (2 copies)
    3.2e-07   30.0  24.2     0.0032   17.0   2.3    5.2  5  LRR_9     Leucine-rich repeat
     0.0035   17.7  39.8        1.4    9.7   0.2   11.6 10  LRR_1     Leucine Rich Repeat
     0.0074   16.3  29.8       0.95    9.7   0.6    8.7  8  LRR_6     Leucine Rich repeat


Domain annotation for each model (and alignments):
>> LRR_8  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.1         4   1.4e+04      29      36 ..     359     366 ..     358     370 .. 0.70
   2 ?    3.5   0.1     0.017        61      25      61 .]     616     651 ..     604     651 .. 0.84
   3 ?    4.1   2.1     0.011        39      24      61 .]     638     671 ..     620     671 .. 0.76
   4 !   23.9  11.1   7.1e-09   2.5e-05       3      61 .]     661     715 ..     659     715 .. 0.90
   5 !   11.9   5.1   4.1e-05      0.15      19      61 .]     743     782 ..     725     782 .. 0.83
   6 !   20.5   6.8   8.5e-08    0.0003       2      61 .]     749     804 ..     748     804 .. 0.94
   7 !   27.4   1.9     6e-10   2.2e-06       2      59 ..     771     823 ..     770     825 .. 0.95
   8 !   16.8   0.2   1.2e-06    0.0042       2      44 ..     793     830 ..     792     840 .. 0.73
   9 ?   -2.0   0.0      0.89   3.2e+03      52      59 ..     861     868 ..     852     869 .. 0.63
  10 !   43.1   0.3   7.5e-15   2.7e-11       4      61 .]     883     938 ..     881     938 .. 0.97
  11 !    7.0   0.1    0.0013       4.8      44      61 .]     947     964 ..     942     967 .. 0.76

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 4
                 EEE--SS- CS
       LRR_8  29 vLdLsnNl 36 
                 +L+L +N+
  EPX73550.1 359 ILNLHQNQ 366
                 67887775 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.017
                 TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8  25 snLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61 
                 ++   Ld+s+  l++l  g  +++p L+ L++++N L
  EPX73550.1 616 KRIIQLDISRRDLNSLI-GLSEQCPCLEDLNIESNEL 651
                 66778999999999995.9999*************87 PP

  == domain 3  score: 4.1 bits;  conditional E-value: 0.011
                 -TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8  24 lsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61 
                 ++ L+ L++ +N+l+ l      + +s+r L+  +N+L
  EPX73550.1 638 CPCLEDLNIESNELSYLT----GCPSSIRNLNAVNNHL 671
                 777999********9995....6777788888888887 PP

  == domain 4  score: 23.9 bits;  conditional E-value: 7.1e-09
                 -SEEE-TTS--SEE-TTSSTT-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8   3 LtsLdLsnNrltslddeaFkglsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61 
                  ++L+  nN+l+sl  ++F++l nL++LdLs+N+l+ l   a+s L +Lr+L++++N+L
  EPX73550.1 661 IRNLNAVNNHLSSL--TTFSHLINLQYLDLSSNQLEDLT--ALSPLIHLRELNVDNNQL 715
                 56777788888888..69********************5..****************98 PP

  == domain 5  score: 11.9 bits;  conditional E-value: 4.1e-05
                 TSSTT-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8  19 eaFkglsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61 
                 +  ++l++L++L L+n  l++++   +s+L +L  L L+gN+L
  EPX73550.1 743 TN-SNLNRLEELLLGNSALESIE--EISSLQNLMVLQLDGNQL 782
                 44.45*****************6..****************98 PP

  == domain 6  score: 20.5 bits;  conditional E-value: 8.5e-08
                 T-SEEE-TTS--SEE-TTSSTT-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8   2 nLtsLdLsnNrltslddeaFkglsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61 
                 +L++L L n+ l+s++  +   l+nL+vL+L  N+lttl  +a + + +Lr L L++N +
  EPX73550.1 749 RLEELLLGNSALESIEEISS--LQNLMVLQLDGNQLTTL--QASQPMIHLRVLRLNNNAI 804
                 79**************9765..69***************..6****************87 PP

  == domain 7  score: 27.4 bits;  conditional E-value: 6e-10
                 T-SEEE-TTS--SEE-TTSSTT-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS CS
       LRR_8   2 nLtsLdLsnNrltslddeaFkglsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgN 59 
                 nL++L+L+ N+lt l+ ++     +L+vL L+nN +++l     ++ p+Lr L++++N
  EPX73550.1 771 NLMVLQLDGNQLTTLQASQPM--IHLRVLRLNNNAIQHL---EVDQYPNLRTLYMDYN 823
                 9***************99998..9***************...5*************99 PP

  == domain 8  score: 16.8 bits;  conditional E-value: 1.2e-06
                 T-SEEE-TTS--SEE-TTSSTT-TT--EEE--SS---GGGGGG CS
       LRR_8   2 nLtsLdLsnNrltslddeaFkglsnLkvLdLsnNllttlspga 44 
                 +L++L L+nN +++l+ ++     nL++L++ +N+ tt+    
  EPX73550.1 793 HLRVLRLNNNAIQHLEVDQYP---NLRTLYMDYNCFTTIP--D 830
                 688888888888888888765...7888888888888885..4 PP

  == domain 9  score: -2.0 bits;  conditional E-value: 0.89
                 .EEE--SS CS
       LRR_8  52 rsLdLsgN 59 
                 r L+Ls+N
  EPX73550.1 861 RNLYLSNN 868
                 44555554 PP

  == domain 10  score: 43.1 bits;  conditional E-value: 7.5e-15
                 SEEE-TTS--SEE-TTSSTT-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8   4 tsLdLsnNrltslddeaFkglsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61 
                 ++L L n ++t+l+ ++ k+l+nL+vLdLs+N ++ +s  a+ g++ L  L+L gNr+
  EPX73550.1 883 KYLELANIQITELPADFAKSLPNLRVLDLSHNYISEIS--ALKGFSLLHRLYLVGNRI 938
                 7899*********************************9..****************98 PP

  == domain 11  score: 7.0 bits;  conditional E-value: 0.0013
                 GGTT--S-.EEE--SS-- CS
       LRR_8  44 afsgLpsLrsLdLsgNrL 61 
                 ++s+L++L++LdL+ N+L
  EPX73550.1 947 TLSHLKKLTHLDLRMNPL 964
                 677888888888877765 PP

>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1         4   1.4e+04      27      35 ..     359     366 ..     358     374 .. 0.58
   2 !    6.8   0.5    0.0026       9.3       6      37 ..     621     652 ..     616     656 .. 0.64
   3 !   24.4   6.3   7.8e-09   2.8e-05       3      43 ..     661     700 ..     659     701 .. 0.92
   4 !   30.3   6.1   1.1e-10   3.8e-07       2      42 ..     682     721 ..     681     723 .. 0.95
   5 !    5.3   1.9     0.008        29       3      43 ..     727     767 ..     725     768 .. 0.83
   6 !   19.6   1.4   2.4e-07   0.00086       1      39 [.     770     807 ..     770     811 .. 0.89
   7 !   20.1   0.3   1.7e-07   0.00062       2      41 ..     793     830 ..     792     836 .. 0.87
   8 !    7.2   0.0    0.0021       7.4       1      26 [.     813     838 ..     813     847 .. 0.78
   9 !    7.0   0.9    0.0024       8.5       4      39 ..     861     895 ..     859     897 .. 0.86
  10 !   32.5   0.1   2.1e-11   7.7e-08       4      43 ..     883     923 ..     880     924 .. 0.92
  11 !   14.0   0.3   1.4e-05      0.05       3      37 ..     928     965 ..     926     970 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 4
                 EEE-.-S-- CS
       LRR_4  27 eLdLsgNnl 35 
                  L+L++N +
  EPX73550.1 359 ILNLHQN-Q 366
                 5666444.4 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0026
                 EE--SS---E-S-HH.H-TT--EEE-.-S---- CS
       LRR_4   6 LdLsnNqltdiplle.klpnLkeLdLsgNnlit 37 
                 Ld+s   l ++ +l+ ++p L+ L++ +N  ++
  EPX73550.1 621 LDISRRDLNSLIGLSeQCPCLEDLNIESN-ELS 652
                 66664245554454437*********878.444 PP

  == domain 3  score: 24.4 bits;  conditional E-value: 7.8e-09
                 --EEE--SS---E-S-HHH-TT--EEE-.-S-----GGGGX CS
       LRR_4   3 LevLdLsnNqltdiplleklpnLkeLdLsgNnlitdldeLk 43 
                  ++L+  nN+l+++  ++ l nL++LdLs+N +++dl+ L+
  EPX73550.1 661 IRNLNAVNNHLSSLTTFSHLINLQYLDLSSN-QLEDLTALS 700
                 6899999*********************888.*****9997 PP

  == domain 4  score: 30.3 bits;  conditional E-value: 1.1e-10
                 S--EEE--SS---E-S-HHH-TT--EEE-.-S-----GGGG CS
       LRR_4   2 nLevLdLsnNqltdiplleklpnLkeLdLsgNnlitdldeL 42 
                 nL++LdLs+Nql d+  l+ l +L+eL++ +Nn+++++d++
  EPX73550.1 682 NLQYLDLSSNQLEDLTALSPLIHLRELNV-DNNQLWNIDGI 721
                 9******************9*********.999*****975 PP

  == domain 5  score: 5.3 bits;  conditional E-value: 0.008
                 --EEE--SS---E-S-HHH.-TT--EEE-.-S-----GGGGX CS
       LRR_4   3 LevLdLsnNqltdipllek.lpnLkeLdLsgNnlitdldeLk 43 
                 L +L+ ++N+ + +++ ++ l  L+eL L gN+ +++++e++
  EPX73550.1 727 LLKLSARGNRFRHLSFTNSnLNRLEEL-LLGNSALESIEEIS 767
                 66889999999999996644999****.88*******99876 PP

  == domain 6  score: 19.6 bits;  conditional E-value: 2.4e-07
                 SS--EEE--SS---E-S-HHH-TT--EEE-.-S-----G CS
       LRR_4   1 pnLevLdLsnNqltdiplleklpnLkeLdLsgNnlitdl 39 
                 +nL vL L +Nqlt+++  + + +L++L L +Nn i+ l
  EPX73550.1 770 QNLMVLQLDGNQLTTLQASQPMIHLRVLRL-NNNAIQHL 807
                 6999**************999*********.77787766 PP

  == domain 7  score: 20.1 bits;  conditional E-value: 1.7e-07
                 S--EEE--SS---E-S-HHH-TT--EEE-.-S-----GGG CS
       LRR_4   2 nLevLdLsnNqltdiplleklpnLkeLdLsgNnlitdlde 41 
                 +L+vL L+nN ++ ++  +  pnL++L++  N   t++++
  EPX73550.1 793 HLRVLRLNNNAIQHLEVDQ-YPNLRTLYMDYN-CFTTIPD 830
                 7************999999.9********666.7777765 PP

  == domain 8  score: 7.2 bits;  conditional E-value: 0.0021
                 SS--EEE--SS---E-S-HHH-TT-- CS
       LRR_4   1 pnLevLdLsnNqltdiplleklpnLk 26 
                 pnL++L+   N+ t+ip ++ l+ L 
  EPX73550.1 813 PNLRTLYMDYNCFTTIPDIYRLKRLV 838
                 79999999999999999955566665 PP

  == domain 9  score: 7.0 bits;  conditional E-value: 0.0024
                 -EEE--SS.---E-S-HHH-TT--EEE-.-S-----G CS
       LRR_4   4 evLdLsnN.qltdiplleklpnLkeLdLsgNnlitdl 39 
                 ++L+LsnN ++  ++  + l   k+L L  N +it l
  EPX73550.1 861 RNLYLSNNtRMI-LQTHNMLLGIKYLEL-ANIQITEL 895
                 78****876888.999999*********.99888877 PP

  == domain 10  score: 32.5 bits;  conditional E-value: 2.1e-11
                 -EEE--SS---E-S-.HHH.-TT--EEE-.-S-----GGGGX CS
       LRR_4   4 evLdLsnNqltdipl.lek.lpnLkeLdLsgNnlitdldeLk 43 
                 ++L L+n q+t++p  ++k lpnL++LdLs+N +i+ ++ Lk
  EPX73550.1 883 KYLELANIQITELPAdFAKsLPNLRVLDLSHN-YISEISALK 923
                 89**************9977*********999.*****9986 PP

  == domain 11  score: 14.0 bits;  conditional E-value: 1.4e-05
                 --EEE--SS---E-S-....HHH-TT--EEE-.-S---- CS
       LRR_4   3 LevLdLsnNqltdipl....leklpnLkeLdLsgNnlit 37 
                 L  L+L +N++ +  +    l+ l++L++LdL ++n++t
  EPX73550.1 928 LHRLYLVGNRIEKMKNvcdtLSHLKKLTHLDL-RMNPLT 965
                 789**********9999877778*********.888884 PP

>> LRR_9  Leucine-rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.1     0.071   2.5e+02      61     105 ..     613     656 ..     604     676 .. 0.78
   2 !    7.9   1.0   0.00056         2      48     116 ..     645     709 ..     640     711 .. 0.76
   3 !    8.7   1.6   0.00032       1.1      48     120 ..     709     777 ..     707     788 .. 0.82
   4 !   10.3   0.6    0.0001      0.36      48     116 ..     776     841 ..     772     848 .. 0.85
   5 !   17.0   2.3     9e-07    0.0032      49     148 ..     865     960 ..     859     962 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.071
       LRR_9  61 PllkrlktlllnnnrivriaegleevlPnleelvltnnelqelad 105
                 P+ kr+  l ++  r ++   gl+e  P+le l + +nel  l+ 
  EPX73550.1 613 PFWKRIIQLDISR-RDLNSLIGLSEQCPCLEDLNIESNELSYLTG 656
                 8888888888865.55555679*****************998875 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.00056
       LRR_9  48 dlsdndirkldgfPllkrlktlllnnnrivriaegleevlPnleelvltnnelqeladldPlaslkkle 116
                 ++  n++  l g P    ++ l   nn +  ++      l nl+ l l++n+l++l+ l Pl++l++l+
  EPX73550.1 645 NIESNELSYLTGCPS--SIRNLNAVNNHLSSLTT--FSHLINLQYLDLSSNQLEDLTALSPLIHLRELN 709
                 556667777777664..45566666777766653..356889***********************9997 PP

  == domain 3  score: 8.7 bits;  conditional E-value: 0.00032
       LRR_9  48 dlsdndirkldgfPllkrlktlllnnnrivriaegleevlPnleelvltnnelqeladldPlaslkklellsl 120
                 ++++n++ ++dg+  l  l  l+   nr ++++   +  l +leel+l n+ l+++ ++  l +l    +l l
  EPX73550.1 709 NVDNNQLWNIDGILRLDGLLKLSARGNRFRHLSF-TNSNLNRLEELLLGNSALESIEEISSLQNL---MVLQL 777
                 678899***********************99986.57789************9999987666555...44444 PP

  == domain 4  score: 10.3 bits;  conditional E-value: 0.0001
       LRR_9  48 dlsdndirkldgfPllkrlktlllnnnrivriaegleevlPnleelvltnnelqeladldPlaslkkle 116
                 +l+ n++  l+    +  l++l lnnn i +++  ++   Pnl++l +  n+++ + d+  l  l +++
  EPX73550.1 776 QLDGNQLTTLQASQPMIHLRVLRLNNNAIQHLE--VD-QYPNLRTLYMDYNCFTTIPDIYRLKRLVNFS 841
                 677899999999888999************996..44.46****************9998888776655 PP

  == domain 5  score: 17.0 bits;  conditional E-value: 9e-07
       LRR_9  49 lsdndirkldgfPllkrlktlllnnnrivriaegleevlPnleelvltnnelqeladldPlaslkklellsllknpvtnkkeyrlyviyklkqlrlldf 147
                 ls+n    l+   +l  +k l l+n +i+ +  +++++lPnl+ l l++n + e++    l  ++ l+ l l+ n + + k+    +  +lk+l+ ld 
  EPX73550.1 865 LSNNTRMILQTHNMLLGIKYLELANIQITELPADFAKSLPNLRVLDLSHNYISEISA---LKGFSLLHRLYLVGNRIEKMKNVCDTLS-HLKKLTHLDL 959
                 67777778899999999**********************************998777...7888999999999**9999998877664.4777777776 PP

       LRR_9 148 r 148
                 r
  EPX73550.1 960 R 960
                 5 PP

>> LRR_1  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1       1.8   6.6e+03       3      18 ..     358     376 ..     358     379 .. 0.68
   2 ?    0.9   1.0      0.31   1.1e+03       2      18 ..     641     659 ..     640     674 .. 0.67
   3 !    9.7   0.2   0.00039       1.4       1      17 [.     682     698 ..     682     701 .. 0.89
   4 ?   -0.9   6.2       1.3   4.6e+03       1      13 [.     704     719 ..     704     789 .. 0.87
   5 ?    1.5   0.2      0.21   7.4e+02       1      15 [.     793     807 ..     793     810 .. 0.80
   6 !    6.0   0.0    0.0068        25       1      16 [.     814     829 ..     814     842 .. 0.88
   7 ?   -1.2   0.0       1.5   5.4e+03       3      11 ..     861     869 ..     860     901 .. 0.76
   8 !    8.4   0.1    0.0011         4       1      13 [.     905     917 ..     905     926 .. 0.81
   9 ?   -2.3   0.1       3.5   1.3e+04       2      12 ..     928     938 ..     927     948 .. 0.83
  10 ?    5.3   0.0     0.011        39       1      13 [.     953     965 ..     953     976 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 1.8
       LRR_1   3 rhLdLsnnpl...lglppn 18 
                 + L+L +n+    ++++p+
  EPX73550.1 358 KILNLHQNQSetaSNFSPP 376
                 689**99997555555555 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.31
       LRR_1   2 LrhLdLsnnpl..lglppn 18 
                 L+ L++++n l  l   p+
  EPX73550.1 641 LEDLNIESNELsyLTGCPS 659
                 8889999999866333333 PP

  == domain 3  score: 9.7 bits;  conditional E-value: 0.00039
       LRR_1   1 nLrhLdLsnnpllglpp 17 
                 nL++LdLs+n+l++l++
  EPX73550.1 682 NLQYLDLSSNQLEDLTA 698
                 8***********99875 PP

  == domain 4  score: -0.9 bits;  conditional E-value: 1.3
       LRR_1   1 nLrhLdLsnnpl...l 13 
                 +Lr+L++ nn+l   +
  EPX73550.1 704 HLRELNVDNNQLwniD 719
                 69********986541 PP

  == domain 5  score: 1.5 bits;  conditional E-value: 0.21
       LRR_1   1 nLrhLdLsnnpllgl 15 
                 +Lr+L L+nn + +l
  EPX73550.1 793 HLRVLRLNNNAIQHL 807
                 69*******987655 PP

  == domain 6  score: 6.0 bits;  conditional E-value: 0.0068
       LRR_1   1 nLrhLdLsnnpllglp 16 
                 nLr+L++ +n+++ +p
  EPX73550.1 814 NLRTLYMDYNCFTTIP 829
                 8**********97665 PP

  == domain 7  score: -1.2 bits;  conditional E-value: 1.5
       LRR_1   3 rhLdLsnnp 11 
                 r L+Lsnn 
  EPX73550.1 861 RNLYLSNNT 869
                 668999986 PP

  == domain 8  score: 8.4 bits;  conditional E-value: 0.0011
       LRR_1   1 nLrhLdLsnnpll 13 
                 nLr+LdLs+n ++
  EPX73550.1 905 NLRVLDLSHNYIS 917
                 8*********984 PP

  == domain 9  score: -2.3 bits;  conditional E-value: 3.5
       LRR_1   2 LrhLdLsnnpl 12 
                 L +L+L +n++
  EPX73550.1 928 LHRLYLVGNRI 938
                 889***99987 PP

  == domain 10  score: 5.3 bits;  conditional E-value: 0.011
       LRR_1   1 nLrhLdLsnnpll 13 
                 +L+hLdL+ npl+
  EPX73550.1 953 KLTHLDLRMNPLT 965
                 7**********94 PP

>> LRR_6  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0     0.062   2.2e+02       1      16 [.     637     652 ..     637     653 .. 0.89
   2 !    9.7   0.6   0.00026      0.95       3      17 ..     681     695 ..     679     696 .. 0.89
   3 ?    2.6   0.6     0.051   1.8e+02       4      15 ..     704     715 ..     702     715 .. 0.90
   4 ?    0.9   0.3      0.17   6.3e+02       3      16 ..     770     783 ..     768     784 .. 0.88
   5 ?    2.1   0.1     0.072   2.6e+02       4      16 ..     793     805 ..     791     805 .. 0.90
   6 ?    0.1   0.0      0.32   1.1e+03       3      16 ..     813     826 ..     813     827 .. 0.89
   7 !    6.5   0.2    0.0029        10       3      13 ..     904     914 ..     902     917 .. 0.85
   8 !    5.9   0.2    0.0043        15       3      16 ..     952     965 ..     950     965 .. 0.86

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.062
       LRR_6   1 snthLteLdLsgNdIg 16 
                 ++++L+ L++ +N+++
  EPX73550.1 637 QCPCLEDLNIESNELS 652
                 589**********986 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00026
       LRR_6   3 thLteLdLsgNdIgD 17 
                  +L++LdLs+N++ D
  EPX73550.1 681 INLQYLDLSSNQLED 695
                 68**********998 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.051
       LRR_6   4 hLteLdLsgNdI 15 
                 hL+eL++  N++
  EPX73550.1 704 HLRELNVDNNQL 715
                 9*********96 PP

  == domain 4  score: 0.9 bits;  conditional E-value: 0.17
       LRR_6   3 thLteLdLsgNdIg 16 
                 ++L  L+L gN+++
  EPX73550.1 770 QNLMVLQLDGNQLT 783
                 7999********98 PP

  == domain 5  score: 2.1 bits;  conditional E-value: 0.072
       LRR_6   4 hLteLdLsgNdIg 16 
                 hL+ L L+ N I+
  EPX73550.1 793 HLRVLRLNNNAIQ 805
                 9*********995 PP

  == domain 6  score: 0.1 bits;  conditional E-value: 0.32
       LRR_6   3 thLteLdLsgNdIg 16 
                 ++L++L + +N+++
  EPX73550.1 813 PNLRTLYMDYNCFT 826
                 58*********997 PP

  == domain 7  score: 6.5 bits;  conditional E-value: 0.0029
       LRR_6   3 thLteLdLsgN 13 
                 ++L+ LdLs+N
  EPX73550.1 904 PNLRVLDLSHN 914
                 79********* PP

  == domain 8  score: 5.9 bits;  conditional E-value: 0.0043
       LRR_6   3 thLteLdLsgNdIg 16 
                  +Lt+LdL+ N ++
  EPX73550.1 952 KKLTHLDLRMNPLT 965
                 68*********886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1063 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1504  (0.0838864); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.11u 0.36s 00:00:01.47 Elapsed: 00:00:00.58
# Mc/sec: 5482.66
//
Query:       EPX73551.1  [L=316]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.6e-17   63.2  15.1    3.9e-17   62.6  15.1    1.2  1  SUR7             SUR7/PalI family
  ------ inclusion threshold ------
       0.17   13.0   1.3       0.39   11.8   1.3    1.6  1  DUF1773          Domain of unknown function
       0.22   11.6   4.6       0.49   10.5   4.6    1.7  1  GWT1             GWT1
          1    7.9   5.9        1.9    7.0   5.9    1.5  1  Ndc1_Nup         Nucleoporin protein Ndc1-Nup
          6    6.9  20.2         71    3.5  15.4    2.9  2  Phage_holin_3_6  Putative Actinobacterial Holin-X, holin supe
        6.9    5.6   8.8       0.35    9.9   3.2    1.6  2  DUF973           Protein of unknown function (DUF973)


Domain annotation for each model (and alignments):
>> SUR7  SUR7/PalI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.6  15.1   1.3e-20   3.9e-17       6     211 ..      10     165 ..       5     166 .. 0.90

  Alignments for each domain:
  == domain 1  score: 62.6 bits;  conditional E-value: 1.3e-20
        SUR7   6 lflslaalilllfailgsiknstplt.siylskfdlsgldlaqigladvysfgvwgyCdnsdvnytkCskpkagypfdpl.eelnsesngkvdlPsnlr 102
                 l+l    l+ ++f +l++   ++pl+ +i lsk+d                 g++gyC     + ++Csk+ +gy++d l ++++s+ +       ++r
  EPX73551.1  10 LIL---LLVAIVFFVLSIC--TAPLSkKIGLSKYDDV-------------LLGTFGYC-----KGDHCSKTMVGYKMDYLnDNVSSGFR----TSTEVR 81 
                 444...4555668999999..999999**********.............9*******.....***************75577777777....899*** PP

        SUR7 103 ktlsklnnltkalfilhiialvlsfislvvgllaicvspdnsrllsflnlllsvlsflatllaalldtllfvfvrkkinlkefgikaslglkflafaWl 201
                 +  s+       +++l+++a+++ + + ++ l+a++   + s+ ++++++ + ++ +++t++a+++ +++fv                +++++l+  Wl
  EPX73551.1  82 QRASY-------GLVLIPVAACICAFATILLLFAHIGRISRSPGFFNFVASVIFFNVFITAIAFVICVITFV----------------PHIQWLS--WL 155
                 ****9.......************************9999999999999999999*****************................*******..** PP

        SUR7 202 alaaallvvi 211
                 +la a + +i
  EPX73551.1 156 VLANAGIQLI 165
                 ***9988776 PP

>> DUF1773  Domain of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   1.3   0.00013      0.39       2      46 ..     274     312 ..     273     313 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00013
     DUF1773   2 flfsknldfskrksgysassvpflngeepedeePLLpdigsilDi 46 
                 f+f  + + sk++    a+++pf+++e+p +++   p + si+Di
  EPX73551.1 274 FRFPFMRNSSKQN----APENPFKDPENPFKDP--PPNPWSIEDI 312
                 899999*******....99**********9998..7889999998 PP

>> GWT1  GWT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   4.6   0.00016      0.49      43     111 ..      78     174 ..       9     208 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00016
        GWT1  43 kkkesketlkllikllllsilllllllllelyvefvSRrlaNlpYvlwvvalnltllllflliel.lfv...........................e 111
                 ++ +++ +  l+   ++++i+ ++++lll +++  +SR    +++v  v+ +n+++ ++ ++i + +fv                           +
  EPX73551.1  78 TEVRQRASYGLVLIPVAACICAFATILLLFAHIGRISRSPGFFNFVASVIFFNVFITAIAFVICViTFVphiqwlswlvlanagiqlivlfllliaR 174
                 444455555555566666677777777888899999*******************999998776643334777777777777766666666666662 PP

>> Ndc1_Nup  Nucleoporin protein Ndc1-Nup
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   5.9   0.00065       1.9      15      70 ..     134     189 ..      90     211 .. 0.75

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.00065
    Ndc1_Nup  15 lllsyllslllsl.sssllwswfplgpaglralllflsllpilvlrkaqlhvgprtt 70 
                  ++++++++++++ + + + sw++l +ag++ ++lfl+l++     kaq  + +r++
  EPX73551.1 134 TAIAFVICVITFVpHIQ-WLSWLVLANAGIQLIVLFLLLIARRQAVKAQAKHIRRSH 189
                 33444444444443333.78*********************9999999995555543 PP

>> Phage_holin_3_6  Putative Actinobacterial Holin-X, holin superfamily III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.1      0.15   4.5e+02      51      62 ..      10      21 ..       4      37 .. 0.58
   2 ?    3.5  15.4     0.024        71      30      96 ..      81     182 ..      77     193 .. 0.66

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.15
  Phage_holin_3_6 51 lllllvalalal 62
                     l+lllva+++++
       EPX73551.1 10 LILLLVAIVFFV 21
                     444444443322 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.024
  Phage_holin_3_6  30 akragsgagllgaagvlallalllllvala..............................lala.a...lwlaaliva.avllvlagvlalvgl 88 
                      ++ra  g++l+ +a+ + ++a +lll+a +                               +++ +   +wl+ l++a a   ++ + l+l+++
       EPX73551.1  81 RQRASYGLVLIPVAACICAFATILLLFAHIgrisrspgffnfvasviffnvfitaiafviCVITfVphiQWLSWLVLAnAGIQLIVLFLLLIAR 174
                      566666777776676666666666666665566666666666666666665554444332333444889*******988888888888999999 PP

  Phage_holin_3_6  89 kklkkakp 96 
                      +++ ka++
       EPX73551.1 175 RQAVKAQA 182
                      87777654 PP

>> DUF973  Protein of unknown function (DUF973)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.3       1.1   3.2e+03      16      25 ..      13      22 ..       7      36 .. 0.44
   2 ?    9.9   3.2   0.00012      0.35      96     149 ..      83     146 ..      70     149 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.1
      DUF973 16 iiasllalil 25
                +++++++++l
  EPX73551.1 13 LLVAIVFFVL 22
                1111111111 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00012
      DUF973  96 iGitgltliligaiiiiigvilaivsll..........slilslillgviilligiilaliGqi 149
                 + ++gl+li + a i  +++il+++  +          + + s i++ v+i +i++++ +i+++
  EPX73551.1  83 RASYGLVLIPVAACICAFATILLLFAHIgrisrspgffNFVASVIFFNVFITAIAFVICVITFV 146
                 5789****************999966669********************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (316 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1080  (0.0602376); expected 358.6 (0.02)
Passed bias filter:                      495  (0.0276089); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.46
# Mc/sec: 2051.29
//
Query:       EPX73552.1  [L=128]
Description: cytochrome c oxidase subunit VIa [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-33  115.3   1.4    2.1e-33  115.1   1.4    1.0  1  COX6A     Cytochrome c oxidase subunit VIa


Domain annotation for each model (and alignments):
>> COX6A  Cytochrome c oxidase subunit VIa
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.1   1.4   1.2e-37   2.1e-33      15     110 ..      29     124 ..      13     126 .. 0.91

  Alignments for each domain:
  == domain 1  score: 115.1 bits;  conditional E-value: 1.2e-37
       COX6A  15 kaaaaeneFvkereavkeHaeettdlwrklslyvaipalilaainaynlekeHaeHvehlkeleerteYeYqnirtknffwGdGdktlFwNdkvNy 110
                 ++++a+ ++ +e ea +eHa++++d+w+k+++yv  palil+++nay+++k+H+eH eh ++ e ++ Y ++n+r k+++wGdG+ktlFwNd+vN+
  EPX73552.1  29 YSSEAKLSWLEEVEAEQEHAKRSSDFWKKVTYYVGGPALILSSLNAYYIYKKHQEHAEHHHNPEVDIPYTFENLRFKKYPWGDGSKTLFWNDNVNH 124
                 4446788999*************************************************************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       615  (0.034302); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 831.42
//
Query:       EPX73553.1  [L=265]
Description: short chain dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.1e-56  191.1   1.0    2.6e-56  190.8   1.0    1.0  1  adh_short_C2   Enoyl-(Acyl carrier protein) reductase
    3.5e-41  140.8   3.1    4.1e-41  140.6   3.1    1.0  1  adh_short      short chain dehydrogenase
    1.1e-17   64.6   1.2    1.4e-17   64.2   1.2    1.1  1  KR             KR domain
     0.0021   17.6   1.4      0.004   16.7   1.4    1.4  1  Epimerase      NAD dependent epimerase/dehydratase family
  ------ inclusion threshold ------
      0.013   15.2   0.1      0.066   13.0   0.0    2.2  2  ACT            ACT domain
      0.016   14.5   0.5      0.051   12.9   0.3    1.8  2  THF_DHG_CYH_C  Tetrahydrofolate dehydrogenase/cyclohydrolase,


Domain annotation for each model (and alignments):
>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  190.8   1.0   8.7e-60   2.6e-56       3     234 .]      34     263 ..      32     263 .. 0.95

  Alignments for each domain:
  == domain 1  score: 190.8 bits;  conditional E-value: 8.7e-60
                   TTSHHHHHHHHHHHTT-EEEEEESSGGHHHHHHHHHHHTTSEE..EE--TTSHHHHHHHHHHHHHHHSSEEEEEE-----EGCSS-GGGH-HHHHHH CS
  adh_short_C2   3 asgIGraiAkalaeeGaevvltdlneeakkrveelaeelgaev..lecDVtdeeqvealveevvekfgklDilvnnagiapklkgpfletsreefdr 97 
                    +gIG  +  a+a++Ga++v+t+ +   k+++ +la+e g +v  ++c+V de++v++++ee+++ ++k+D++v nagia +  + ++e++ e++++
    EPX73553.1  34 SKGIGLSVCSAFAQAGANIVMTYHSTPCKDTAVKLAKENGVRVdaVACNVGDEQSVANAFEEIKRLHEKIDVVVANAGIAFR--SAAEECTTEQWEH 128
                   58**************************************88666*************************************..999********** PP

                   HHHHHTHHHHHHHHHHHHHCTSC..CEEEEEEEGGGTSBSTTTT..HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCTGGGGSTTHHHHHH CS
  adh_short_C2  98 aldvnlyslfllakaalplmkeg..gsivnlssvgaervvpnyn..aygaaKaalealtrylAvelgpkgiRvNavspgpikTlaasgikgfdelle 190
                   +++vn++s++++a +a +++k++  g+ +++ss+++++v + ++  ay+++Kaa+++ +++lA e++    RvN+vspg+i+T++   +    ++++
    EPX73553.1 129 VMNVNVTSIHRIASRAGQIFKQQgfGNFIATSSMSGTIVNTPQKvsAYCTSKAAVKHYCKALATEWAG-FARVNTVSPGYIATDMPG-Y----QFRK 219
                   ******************999988************9995544448**********************.9**************943.3....5899 PP

                   HHHHHSTTSS-B-HHHHHHHHHHHCSGGGTT--SEEEEESTTGG CS
  adh_short_C2 191 elearaplgrlgtpeevaeaalfLasdeasyitGqtlvvDgGlt 234
                    +e   p++r+g  +e    +lfLasd+++++tG +l++DgG+t
    EPX73553.1 220 DWEPYVPMQRIGLSTELRGSYLFLASDASTFVTGLDLIIDGGYT 263
                   *******************************************8 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.6   3.1   1.4e-44   4.1e-41       1     189 [.      26     215 ..      26     221 .. 0.91

  Alignments for each domain:
  == domain 1  score: 140.6 bits;  conditional E-value: 1.4e-44
                 SEEEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHT.TSEEEEEE-TTTSHHHHHHHHHHHHHHHSSESEEEE---SS--SSGGGCSH CS
   adh_short   1 kvvlvtGassGIGraiakelakeGakvvvvdrseekleevakelkee.gakalaiqvDvtdreevealvekavkklgkldvLvnNAGitgsgpfselse 98 
                 k ++v G+s+GIG+ ++ ++a++Ga++v++  s  +++ +a +l +e g ++ a++++v d+++v +++e+++  ++k+dv+v+NAGi+ +++++e + 
  EPX73553.1  26 KNAVVFGGSKGIGLSVCSAFAQAGANIVMTYHS-TPCKDTAVKLAKEnGVRVDAVACNVGDEQSVANAFEEIKRLHEKIDVVVANAGIAFRSAAEECTT 123
                 689************************995555.55555555555555*************************************************** PP

                 HHHHHHHHHHTHHHHHHHHHHHHHHHHCTTEEEEEEEEGGG..TSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHHHHH CS
   adh_short  99 eewervievNltgvflltravlpamlkqssGrIvnvsSvag..kvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdmake 189
                 e+we v++vN+t++  ++  + + +++q  G+ + +sS+ g   +    v+aY++sKaav+++ ++la e+a    rvn+v PG+++Tdm   
  EPX73553.1 124 EQWEHVMNVNVTSIHRIASRAGQIFKQQGFGNFIATSSMSGtiVNTPQKVSAYCTSKAAVKHYCKALATEWAGF-ARVNTVSPGYIATDMPGY 215
                 *****************************************766778899***********************9.9*************9765 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.2   1.2   4.7e-21   1.4e-17       4     147 ..      29     172 ..      27     198 .. 0.84

  Alignments for each domain:
  == domain 1  score: 64.2 bits;  conditional E-value: 4.7e-21
                 EEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHTT-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE---------TTT--H CS
          KR   4 litGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaelealgaevevvaaDvsdkdavealleeikaeeppikGvihaAgvlrdklleemta 102
                 ++ GG  g+Gl+++   a+ ga+ +v++  s   ++ +++ ++  +++g++v++va+ v d+++v++++eeik+ +++i  v+  Ag++  ++ ee+t+
  EPX73553.1  29 VVFGGSKGIGLSVCSAFAQAGAN-IVMTYHS---TPCKDTAVKLAKENGVRVDAVACNVGDEQSVANAFEEIKRLHEKIDVVVANAGIAFRSAAEECTT 123
                 799******************96.5555555...3444456888899**************************************************** PP

                 HHHHHHHTTTTHHHHHHH....HHTTTS--SEEEEEEEHHHHH--TT-H CS
          KR 103 edleqvlapKvkGawnLh....elledesldffvlfSSiagllgsagqa 147
                 e++e+v++  v+ ++ +     ++++++    f+ +SS++g++ ++ q 
  EPX73553.1 124 EQWEHVMNVNVTSIHRIAsragQIFKQQGFGNFIATSSMSGTIVNTPQK 172
                 *************99997333367888999***********99988774 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   1.4   1.3e-06     0.004       2     160 ..      29     194 ..      28     206 .. 0.78

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 1.3e-06
                 EEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC......EEEE--TT-HHHHHHHHHH.....HT-SEEEE--S---HHHHHHSHHHHHH CS
   Epimerase   2 lVtGatGfiGsalvkallekgyevigldrlssasntarledl......elveldltdrsalerlfke.....eqpdavihlAavggvaassedpadfie 89 
                 +V G++  iG  ++ a++++g +++   + +  + ta +  +      + v +++ d+++++++f+e     e++d+v+  A+++  +a  e  ++ +e
  EPX73553.1  29 VVFGGSKGIGLSVCSAFAQAGANIVMTYHSTPCKDTAVKLAKengvrvDAVACNVGDEQSVANAFEEikrlhEKIDVVVANAGIAFRSAAEECTTEQWE 127
                 79999999***************99999998877777665558999*************999999875555358999*999999999999999999998 PP

                 HHTHHHHHHHHHHH........HHTCTEEEEEEEGGGGTSCSSSSBSTCSTTS----SSHHHHHHHHHHHHHHHHHHHH CS
   Epimerase  90 knlqgtlnlleaar........kagvkrllflsSsevYGkdaeqpkeettltgplkpnspYaaaKlageklveayaaqy 160
                 + ++++++ ++ +         ++g  +++  sS  + G         +      +  s+Y  +K+a+ ++++a+a + 
  EPX73553.1 128 HVMNVNVTSIHRIAsragqifkQQGFGNFIATSS--MSGTI------VN----TPQKVSAYCTSKAAVKHYCKALATEW 194
                 7777777766666655555554445556666666..44422......22....347899***************99876 PP

>> ACT  ACT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   2.2e-05     0.066      17      66 ..      41     100 ..      39     101 .. 0.94
   2 ?   -1.6   0.0       0.8   2.4e+03      25      32 ..     131     138 ..     130     152 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2.2e-05
                 HHHHHHHTTSEEEEEEEEEESTT..........ECEEEEEEEEEEHHHHHHHHHHHHTTC CS
         ACT  17 vfgaladrgiNidsieqrssedk..........vagivfvvivvdeedleevlealkkle 66 
                 v++a+a++g Ni++  +++              v   ++ + v+de++++++ e++k+l 
  EPX73553.1  41 VCSAFAQAGANIVMTYHSTPCKDtavklakengVRVDAVACNVGDEQSVANAFEEIKRLH 100
                 89******************999*********99999*******************9986 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.8
                 TSEEEEEE CS
         ACT  25 giNidsie 32 
                 ++N++si+
  EPX73553.1 131 NVNVTSIH 138
                 78888885 PP

>> THF_DHG_CYH_C  Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.3   1.7e-05     0.051      33      74 ..      22      65 ..      15     122 .. 0.71
   2 ?   -0.7   0.1      0.26   7.8e+02      71      90 ..      94     113 ..      85     147 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.7e-05
                   --TT-EEEEE---TTTHHHHHHHHHCTT-EEEEE-TTS..CCHH CS
  THF_DHG_CYH_C 33 elegkkvvvvGrsnivgkplallLleknatVtvchskt..kdla 74
                   +l+gk++vv G s+ +g ++   +++++a + ++ ++t  kd a
     EPX73553.1 22 SLKGKNAVVFGGSKGIGLSVCSAFAQAGANIVMTYHSTpcKDTA 65
                   799************************88766655555243332 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.26
                    CCHHHHHCCSSEEEE-SS-T CS
  THF_DHG_CYH_C  71 kdlaeitreadivvvavGkp 90 
                    ++++++ ++ d+vv+ +G +
     EPX73553.1  94 EEIKRLHEKIDVVVANAGIA 113
                    56777888889999988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (265 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       849  (0.0473534); expected 358.6 (0.02)
Passed bias filter:                      654  (0.0364772); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.45
# Mc/sec: 1780.68
//
Query:       EPX73554.1  [L=124]
Description: substrate-specific nuclear cofactor for exosome activity [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-16   60.1   0.5    2.4e-16   60.1   0.5    1.5  2  Sas10_Utp3  Sas10/Utp3/C1D family
  ------ inclusion threshold ------
      0.024   13.9   0.3      0.026   13.9   0.3    1.1  1  CorA        CorA-like Mg2+ transporter protein


Domain annotation for each model (and alignments):
>> Sas10_Utp3  Sas10/Utp3/C1D family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.1   0.5   2.6e-20   2.4e-16       1      87 []       9      88 ..       9      88 .. 0.90
   2 ?   -2.5   0.0      0.94   8.4e+03      10      24 ..      91     105 ..      89     117 .. 0.52

  Alignments for each domain:
  == domain 1  score: 60.1 bits;  conditional E-value: 2.6e-20
  Sas10_Utp3  1 leslsksldelqeslepllskakaeekkslsd....eklsegisllslKnelllaYllnlllylllklsgvelkdhpvvkeLvrlRvyleK 87
                +e l+++ld+++eslepl+++        +s+    + +++   ++++K ++ l+Y++n++ly++ kl+g++++++p++ eL r+++y  K
  EPX73554.1  9 FERLHEQLDKVEESLEPLKES--------ESIfdlvDGKED---IEQAKQYVSLSYAINSALYSYYKLNGTSTEESPIMSELQRVKQYVGK 88
                6899**************993........333457677888...********************************************876 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.94
  Sas10_Utp3  10 elqeslepllskaka 24 
                  ++++++p  + +++
  EPX73554.1  91 HAEKHIQPSAEGNND 105
                 566677775553222 PP

>> CorA  CorA-like Mg2+ transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.3   2.9e-06     0.026     120     213 ..       2      91 ..       1     113 [. 0.81

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 2.9e-06
        CorA 120 vdrlfellekleeeldeledeledstkkeilrelaqlrrrlvklrralapnrevlkrlla.kaddkllddedkeylrdlldelerllemlealre 213
                 + ++ +l e l+e+ld++e+ le  ++ e + +l++ ++++ + +++++ + ++ ++l++ ++++++ ++e     + +++el+r+ +++  ++ 
  EPX73554.1   2 NSEYSHLFERLHEQLDKVEESLEPLKESESIFDLVDGKEDIEQAKQYVSLSYAINSALYSyYKLNGTSTEE-----SPIMSELQRVKQYVGKIKH 91 
                 77899*****************************************9998888887777744444444444.....6999999999998876665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1104  (0.0615762); expected 358.6 (0.02)
Passed bias filter:                      582  (0.0324614); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 897.07
//
Query:       EPX73555.1  [L=259]
Description: pyridoxal reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.4e-32  111.2   0.0    7.8e-28   97.5   0.0    2.9  3  Aldo_ket_red  Aldo/keto reductase family


Domain annotation for each model (and alignments):
>> Aldo_ket_red  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.0   0.0   0.00067        12      17      36 ..      10      29 ..       5      30 .. 0.90
   2 !    7.0   0.0   0.00017         3      60     105 ..      29      74 ..      28      76 .. 0.91
   3 !   97.5   0.0   4.4e-32   7.8e-28     136     291 ..      76     237 ..      73     240 .. 0.93

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.00067
                  HHHHHHHHHHHHHTT--EEE CS
  Aldo_ket_red 17 keealellrraleaGinffD 36
                   ++a+e+l++a+e+G +f++
    EPX73555.1 10 SKQAFEALDYAVEHGATFWN 29
                  579***************98 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.00017
                   TGGG-EEEEEE--SSSTTSSSS-HHHHHHHHHHHHHHHT-.S-EEEE CS
  Aldo_ket_red  60 kreeviiatKvdlrdaeiksglskeniresleeslkrLgt.dyvDll 105
                   + ++v+++ K+   d++ ++++ +e +++s++++l +L+  +++Dl+
    EPX73555.1  29 NSDKVFLSVKG-AVDSNCHPHGDEELLTTSIHNILTTLRNtKKLDLF 74 
                   569********.**************************755999998 PP

  == domain 3  score: 97.5 bits;  conditional E-value: 4.4e-32
                   EEEES--HHHHHHHHHTTT--EEEEE-B-BTT.-HHHHTTHHHHHHHTT-EEEEBSTTGGGTTGTTTSS---SSSCCC-------...........T CS
  Aldo_ket_red 136 iGvSnfsveqlekakkkkkvkivavqveynll.releeegllelckkkgvpliaysplggGlltgkyqseedkedkeprkdlkrd...........e 220
                   +G+S+ s+  +++a  ++++ ivav+vey+l+ re+ee+ +l+++k+ ++pliayspl +Gllt   +++e+ e+++++     +           e
    EPX73555.1  76 VGLSEASATTIRRA--HAVLSIVAVEVEYSLCsREIEENDVLSTYKESNIPLIAYSPLDMGLLTDAMKKKEELERFTAA-----FppvhcfdrfqpE 165
                   8***********99..**************************************************9999999977665.....1344568899*** PP

                   S-HHHHHHHHHHHHHHHHTT--HHHHHHHHHTTS.TT-SEEEE--SSHHHHHHHHGGGG----HHHHHHHHH CS
  Aldo_ket_red 221 rtsknldaaeelselakehgvslaqlalryalsq.pavgivipgasnieqlednldalelklseeevaelde 291
                   +++kn++++ +l++lak++  +l ++al++ + + ++ +i+ipga+n+  l +nl+a++ +ls+ +++e+ +
    EPX73555.1 166 TFEKNFECLHALQALAKSYYRTLPEMALSFPITMvEGMVIPIPGATNVTLLAQNLNAVSKPLSTAQIKEIYA 237
                   ******************************99887999*******************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       508  (0.028334); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.28s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 1863.88
//
Query:       EPX73556.1  [L=507]
Description: uroporphyrin methyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.2e-46  158.5   0.0    2.9e-46  158.1   0.0    1.2  1  TP_methylase    Tetrapyrrole (Corrin/Porphyrin) Methylases
    7.3e-10   39.2   0.0    1.6e-09   38.1   0.0    1.6  1  NAD_binding_7   Putative NAD(P)-binding
    0.00033   20.2   0.0    0.00062   19.4   0.0    1.5  1  Sirohm_synth_C  Sirohaem biosynthesis protein C-terminal


Domain annotation for each model (and alignments):
>> TP_methylase  Tetrapyrrole (Corrin/Porphyrin) Methylases
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.1   0.0   4.9e-50   2.9e-46       2     211 ..     265     471 ..     264     473 .. 0.91

  Alignments for each domain:
  == domain 1  score: 158.1 bits;  conditional E-value: 4.9e-50
  TP_methylase   2 lylVGvGpGdpellTvrAlralktadvvlgddsraleilldllaeel.eleapmgkekepleeayeeiaealaealragkdVvllvsGDPlvygtgs 97 
                   ++lVG GpGdpellTv+A++a+++ad +l+d+ +++e++l+l+++ +    a++++   ++++a++e  e   +al +g  Vv+l++GDP++yg+g+
    EPX73556.1 265 IVLVGSGPGDPELLTVAARNAIRKADYILADK-LVPESVLKLIPRHTpLFIARKFPG--NADRAQDELHEVALDALTRGDYVVRLKQGDPYIYGRGG 358
                   89***************************999.***********9876555555555..89999********************************* PP

  TP_methylase  98 elvealrareagieveviPGvsslqaaaarlgiplteggevlsvl..lpglakeeereleallangdtlvllkaprklaelaelLkea.lyddttpv 191
                   e+v ++ +  +g+  +viPG+ss+  a+ ++gip+t++g++ ++l  + +++k +   +  ++a  +t v+l+a+++l+ l+ +L++  +++d+ pv
    EPX73556.1 359 EEVLFFHK--HGYVPKVIPGISSALMAPVSAGIPITQRGVADQLLvcTGTSQKGAMPVIPPFVA-SQTAVFLMALHRLDILVSALLQNgWPKDL-PV 451
                   ***99999..***********************************9855555556666666655.8*************************977.** PP

  TP_methylase 192 avveragtedervvrgtlee 211
                    ++er++++d+r + +tl+ 
    EPX73556.1 452 CIAERVSCPDQRFIFSTLGN 471
                   **************9**986 PP

>> NAD_binding_7  Putative NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.1   0.0   2.7e-13   1.6e-09       3     104 .]       5     131 ..       3     131 .. 0.70

  Alignments for each domain:
  == domain 1  score: 38.1 bits;  conditional E-value: 2.7e-13
  NAD_binding_7   3 ldlkgkkvlvvGgGevAarkvrklleag.akvtvvapev.......keele........elvklaeeelekd...........leg.......adl 64 
                    + lk+   +++G G+ A ++v   l+++  k++     +           +        ++v+l++                 l g       +dl
     EPX73556.1   5 TSLKDAVAIIIGSGKSACKRVDLCLSEDvSKIIWFCDSStaggfdlG---PfqpdkvavDKVQLEP-----InsfdvstslftL-GnaftnyvVDL 91 
                    57889999******************996788887777444443432...0444333332233221.....1222333334441.0333335588* PP

  NAD_binding_7  65 viaatddrelneriaeaakarrilvnvadkpelcdfifpa 104
                    ++++ ++   ne+i++ +k++ri++n++d+p+lc+f++pa
     EPX73556.1  92 LFITDSKFPFNEKIYDVCKRNRIPINIVDSPSLCSFTLPA 131
                    **************************************97 PP

>> Sirohm_synth_C  Sirohaem biosynthesis protein C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0     1e-07   0.00062      13      58 ..     176     213 ..     164     219 .. 0.74

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 1e-07
  Sirohm_synth_C  13 kLRkkLReiapdqeegpkRMkWmskvcdswsleelaeldeedmekL 58 
                     + R+        ++++p+  +W+ +v+++w le+l +++e+d+ + 
      EPX73556.1 176 AARS--------STQNPQKRQWINHVSEFWPLEKLIRMSEDDILSV 213
                     4333........355566669*********************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (507 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       425  (0.0237046); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3556.84
//
Query:       EPX73557.1  [L=105]
Description: hypothetical protein SOCG_04966 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.089   12.1   2.8        0.1   11.9   2.8    1.0  1  AmpE      Regulatory signalling modulator protein AmpE


Domain annotation for each model (and alignments):
>> AmpE  Regulatory signalling modulator protein AmpE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   2.8   5.6e-06       0.1      16     103 ..      12     104 ..       8     105 .] 0.78

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 5.6e-06
        AmpE  16 fklgehwqldhrlevvfrr...vkeaslvktllltivamvvvlailrllqgllfglpllllwillgl..lcigagkvrkhyraylkaaargda 103
                 f  g+ + + h   +v +r   +k++ ++ t+llt    +++++ +   ++ lf +   +l  +l++  lc+ +   r  + +y + a+++d+
  EPX73557.1  12 FSAGNEYMMKHIWCLVKHRhqtLKTVFIMTTILLTAFCRILLFTFVMKQNSSLFIISDAVLMTILCFiyLCLLSLINRTFFINYNNLANQSDF 104
                 6677778787766555443111556778899999999999999999999999999999999999886347999999********999999885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       988  (0.0551063); expected 358.6 (0.02)
Passed bias filter:                      287  (0.0160076); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.27s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 752.41
//
Query:       EPX73558.1  [L=56]
Description: hypothetical protein SOCG_02779, partial [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (56 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       426  (0.0237604); expected 358.6 (0.02)
Passed bias filter:                      278  (0.0155056); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.24s 00:00:00.60 Elapsed: 00:00:00.40
# Mc/sec: 415.27
//
Query:       EPX73559.1  [L=57]
Description: hypothetical protein SOCG_02780 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       232  (0.0129399); expected 358.6 (0.02)
Passed bias filter:                      138  (0.00769703); expected 358.6 (0.02)
Passed Vit filter:                         4  (0.000223102); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.26s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 425.55
//
Query:       EPX73560.1  [L=214]
Description: hypothetical protein SOCG_02781 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
       0.25   11.7  11.0       0.29   11.4   0.0    2.2  2  Cg6151-P      Uncharacterized conserved protein CG6151-P
       0.45   10.3   2.4       0.41   10.4   0.6    1.8  2  TMEM208_SND2  SRP-independent targeting protein 2/TMEM208


Domain annotation for each model (and alignments):
>> Cg6151-P  Uncharacterized conserved protein CG6151-P
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   3.3e-05      0.29      62     109 ..      21      68 ..       8      70 .. 0.88
   2 ?    1.3   7.8     0.045     4e+02       9      82 ..      74     145 ..      69     159 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 3.3e-05
    Cg6151-P  62 kfetnwmraalYlvmavvqwlslivqatslivaavlllltgvlYglaa 109
                   e+n +++ ++ ++a++q ++  +  + l+++  + l +gv+Ygla+
  EPX73560.1  21 PSEKNKFQCHFWRGIATIQLILYNFVFLVLVFGYKIPLNSGVFYGLAG 68 
                 5678999************999999999999999***********986 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.045
    Cg6151-P   9 cialGianiftlsvvlivfsilalvsgfvvlfiEvPlllricptsskfdefiekfetnwmraalYlvmavvqwl 82 
                  i++ i++++t    +  ++  + vs++ v f+ vP + ++  t++k+ +f +   + ++  ++++ + ++ ++
  EPX73560.1  74 IIIFVIVTLITYPGWFTQAGCNMCVSALYVCFLNVPGFAMYY-TAKKIMQFEKIN-NRFFYVVCFVDFVLFVFI 145
                 6788899988999999999******************99987.777777664433.444444444444444444 PP

>> TMEM208_SND2  SRP-independent targeting protein 2/TMEM208
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.22     2e+03      30      37 ..      42      49 ..      13      83 .. 0.58
   2 ?   10.4   0.6   4.6e-05      0.41      98     137 ..      84     123 ..      77     130 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.22
  TMEM208_SND2 30 lylllrll 37
                  ly ++ l+
    EPX73560.1 42 LYNFVFLV 49
                  22222222 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 4.6e-05
  TMEM208_SND2  98 iyltwivqvlsilfgnkfWllylviPayalYklwglilgp 137
                    y  w++q ++ +  + +++++l +P++a+Y   ++i+++
    EPX73560.1  84 TYPGWFTQAGCNMCVSALYVCFLNVPGFAMYYTAKKIMQF 123
                   5778******9999999****************9999965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       722  (0.04027); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1539.74
//
Query:       EPX73561.1  [L=321]
Description: hypothetical protein SOCG_02782 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.14   12.0   2.2        2.3    8.0   3.2    2.0  2  VPS13_C   Vacuolar-sorting-associated 13 protein C-terminal


Domain annotation for each model (and alignments):
>> VPS13_C  Vacuolar-sorting-associated 13 protein C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0     0.027   4.8e+02     104     144 ..      38      78 ..      37      81 .. 0.92
   2 ?    8.0   3.2   0.00013       2.3     106     167 ..     190     254 ..     170     258 .. 0.76

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.027
     VPS13_C 104 PvglfnnissGvkdlfyePiqglvkgpeefgeglakGaksL 144
                 P+  + n+ +G+  l  +P+  +    +e+ +++a+G   +
  EPX73561.1  38 PYSHVDNMEKGCLCLQSDPVPPYSRRHQEASIHMAQGNGFF 78 
                 788899*******************************8766 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.00013
     VPS13_C 106 glfnnissGvkdlfyePiqglvk...gpeefgeglakGaksLvkktvfGvadsvskitgsvskgl 167
                  +f+++ sG++ lf + ++g+ +   g ++f+ +l +G+++L++ +   +++ +s i+ ++++ l
  EPX73561.1 190 SFFSSLFSGISTLFSSLFSGISTlfsGISSFFSSLFSGISTLFSGISSFLSSLFSGISSAIMSAL 254
                 47889999999999988888776443588888888888888888888888888888888877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1121  (0.0625244); expected 358.6 (0.02)
Passed bias filter:                      500  (0.0278878); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 2207.37
//
Query:       EPX73562.1  [L=306]
Description: hypothetical protein SOCG_02783 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.094   12.6   0.5         15    5.4   0.1    2.2  2  Vip3A_N     Vegetative insecticide protein 3A N terminal
        9.7    5.8   7.2         28    4.4   0.8    2.5  2  Plasmo_rep  Plasmodium repeat family


Domain annotation for each model (and alignments):
>> Vip3A_N  Vegetative insecticide protein 3A N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0    0.0017        15      10      49 ..     194     233 ..     188     240 .. 0.89
   2 ?    5.4   0.1    0.0017        15      10      48 ..     263     301 ..     257     306 .] 0.89

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0017
     Vip3A_N  10 ngiygfatgikdimnmifktdtggdltldeilknqqllnd 49 
                 ngi g+  gi + +n+ f  + g +++ +e +  q+l ++
  EPX73562.1 194 NGIIGIGNGIGNSVNLAFGPNQGDEVSQNEEIELQHLAEQ 233
                 9**************************9999998887654 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.0017
     Vip3A_N  10 ngiygfatgikdimnmifktdtggdltldeilknqqlln 48 
                 ngi g+  gi + +n+ f  + g +++ +e +  q+l +
  EPX73562.1 263 NGIIGIGNGIGNSVNLAFGPNQGDEVSQNEEIELQHLAE 301
                 9**************************999998888765 PP

>> Plasmo_rep  Plasmodium repeat family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.8    0.0031        28      12      19 ..     218     225 ..     214     225 .. 0.94
   2 ?    4.4   0.8    0.0031        28      12      19 ..     287     294 ..     283     294 .. 0.94

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.0031
  Plasmo_rep  12 EieqNrEI 19 
                 E++qN+EI
  EPX73562.1 218 EVSQNEEI 225
                 99*****9 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.0031
  Plasmo_rep  12 EieqNrEI 19 
                 E++qN+EI
  EPX73562.1 287 EVSQNEEI 294
                 99*****9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (306 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       546  (0.0304535); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 2148.17
//
Query:       EPX73563.1  [L=317]
Description: histone lysine methyltransferase Set5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-15   56.7   0.0    1.5e-14   54.7   0.0    1.9  1  SET       SET domain


Domain annotation for each model (and alignments):
>> SET  SET domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.7   0.0   8.4e-19   1.5e-14       1     168 [.      18     140 ..      18     141 .. 0.81

  Alignments for each domain:
  == domain 1  score: 54.7 bits;  conditional E-value: 8.4e-19
                 SCEEEESSXBXTTXEEEEEEECCEECHHHHHHHHHH..............HTEEEEEXGGXXGGSXHHHHHHHTTSSHHHHHHHHHHHHHHHHHHTHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         SET   1 GrGvfAtedIpkgeficeypeeiiltkdeadksele..............aylfslpeapknlaftkelakasastllqklakdqkqaekedtdaalka 85 
                 G+G++A+ dIp+g+ i  y e +++++  + k+ +e              ++++  p                                          
  EPX73563.1  18 GMGMVAKIDIPAGTRI--YSETPLIRTKSDAKEIEEalssrtkeekdafhNLFNAHP------------------------------------------ 72 
                 89**************..**9888888888888877666666666655554444444.......................................... PP

                 HHHHXTTTSXXXHCCCCC...HCCCHEEEETEEEEEECCCGTTGGGCEEXSSSSEEEEEEEETTSSEEEEEESSXBXTTEEEEEXT CS
                 xxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         SET  86 sskaesdlnaskpeagaf...saiagysidaralksgngagplarflNHsCdpNcnltvqnvlrgprvavfAtrdIkkGeEltidY 168
                             ++ g+f   +  + ++id++   +        + +NH+C+pN+++t+ +  + ++v+v + rdI  GeE++ +Y
  EPX73563.1  73 ------------KTMGPFlgpFYSNALTIDESKGGMFLLG----SRMNHDCSPNVKHTWNP--KLDQVTVHSVRDIHRGEEILTTY 140
                 ............7777777777888888996766666665....*****************..9*********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (317 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       629  (0.0350828); expected 358.6 (0.02)
Passed bias filter:                      545  (0.0303977); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.36s 00:00:01.00 Elapsed: 00:00:00.56
# Mc/sec: 1693.92
//
Query:       EPX73564.1  [L=270]
Description: hypothetical protein SOCG_02785 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
       0.08   13.0   0.0       0.17   12.0   0.0    1.5  1  Peptidase_S78_2  Putative phage serine protease XkdF


Domain annotation for each model (and alignments):
>> Peptidase_S78_2  Putative phage serine protease XkdF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   9.4e-06      0.17      33      78 ..      49      90 ..      35     104 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 9.4e-06
  Peptidase_S78_2 33 taeeiekaaheflkeyrevdkqHeferagegvvvesyiaptdeevg 78
                      ++ei+k a+ef+k+    d +H+++++++  +ve +i    ++++
       EPX73564.1 49 MKKEITKLAYEFVKN----DPNHQLSKHDARDLVEAFINVPVTSLD 90
                     5789********876....99****************985444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (270 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       892  (0.0497518); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 1847.99
//
Query:       EPX73565.1  [L=991]
Description: helicase Required for RNAi-mediated heterochromatin assembly Hrr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.4e-39  133.4   0.0    2.2e-38  131.9   0.0    1.9  1  AAA_12           AAA domain
    5.2e-28   98.5   0.8      2e-26   93.4   0.8    2.4  1  AAA_11           AAA domain
    9.9e-10   38.9   0.0    4.2e-07   30.4   0.0    3.1  3  AAA_19           AAA domain
    1.2e-07   31.7   0.0    3.2e-06   27.0   0.0    2.4  2  AAA_30           AAA domain
    0.00012   21.7   3.1    0.00012   21.7   3.1    3.2  4  UvrD-helicase    UvrD/REP helicase N-terminal domain
    0.00021   21.4   1.4     0.0014   18.6   1.4    2.3  1  ResIII           Type III restriction enzyme, res subunit
    0.00032   20.1   0.5     0.0021   17.4   0.1    2.3  2  DUF2075          Uncharacterized conserved protein (DUF2075)
    0.00038   20.0   0.0    0.00096   18.7   0.0    1.7  1  PhoH             PhoH-like protein
     0.0012   18.6   0.3     0.0032   17.2   0.3    1.8  1  DEAD             DEAD/DEAH box helicase
     0.0015   18.9   0.0     0.0034   17.8   0.0    1.5  1  AAA_16           AAA ATPase domain
     0.0021   17.8   0.0        1.1    9.0   0.0    3.1  3  Viral_helicase1  Viral (Superfamily 1) RNA helicase
     0.0035   17.7   0.3       0.04   14.3   0.3    2.7  1  AAA              ATPase family associated with various cellul
  ------ inclusion threshold ------
      0.011   16.0   0.0      0.074   13.3   0.0    2.3  2  AAA_22           AAA domain
      0.029   13.7   0.0      0.083   12.2   0.0    1.8  1  ATPase           KaiC
      0.056   13.4   0.0       0.24   11.4   0.0    2.0  2  AAA_5            AAA domain (dynein-related subfamily)
      0.066   13.0   0.9       0.14   11.9   0.9    1.5  1  Pox_Ag35         Pox virus Ag35 surface protein
       0.11   12.0   0.0       0.23   11.0   0.0    1.4  1  AAA_7            P-loop containing dynein motor region
       0.19   11.3   0.0       0.41   10.2   0.0    1.5  1  AAA_25           AAA domain


Domain annotation for each model (and alignments):
>> AAA_12  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.9   0.0   2.2e-41   2.2e-38       2     198 ..     749     933 ..     748     934 .. 0.91

  Alignments for each domain:
  == domain 1  score: 131.9 bits;  conditional E-value: 2.2e-41
      AAA_12   2 erSlferllkkekekvvlLdtqYRmhpeIsrfpsklfYkgkLkdaesvkkreleaqealeepleplvfidvekseeekekkeksyiNeeEaelvvklve 100
                 + S+ferl++++     +L++q Rmhp+I +++ + +++  L d++ +k r++        +l++++f + + +e+  +   +s++Ne Ea+++v++ +
  EPX73565.1 749 SISIFERLVENG-MICDMLSIQRRMHPQIRQLVDSVYFG--LSDHSVAKIRPTV---PGMGQLRRYFFTHANFEETDGS---SSKFNEFEAKMLVQFAS 838
                 679*********.********************999988..8888888888777...5667778888888876555555...79*************** PP

      AAA_12 101 kllkkgseeerkkigvitpYraqvellkkklkekeeeksekeievntvdgfQGrekdviilslVRsnekkeigflkderrlNValTRAkskliivGnk 198
                 +l+ +g++    +i  +t+Y aq++l+++ ++++ +++ +++++v+tvdg+QG+e+dvi+lslVR+++++++gfl +  r++Val+RA++ ++++Gn+
  EPX73565.1 839 YLILHGVNP--LQITCLTFYGAQKKLIENLISKHLPDE-KENMRVATVDGYQGEENDVILLSLVRNHDQRSVGFLVSTYRVCVALSRARRGIYMFGNA 933
                 *********..9********************988886.679******************************************************97 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.4   0.8     2e-29     2e-26       2     257 ..     364     735 ..     363     738 .. 0.77

  Alignments for each domain:
  == domain 1  score: 93.4 bits;  conditional E-value: 2e-29
      AAA_11   2 lndsqreaiksalseseitliqGPPGtgKTktivellsqllsrrkseeeksakpriLvCapSNaAvDellerllrglldsegekykpkivRvgneeeri 100
                 l++sq++a +s+ls++  +liqGPPGtgKT++ ++ ++ l      e+++s+   i v+ ++N AvD++l++llr         ++ +++R+g+  +  
  EPX73565.1 364 LDKSQLKAYQSILSRKL-ALIQGPPGTGKTFVALKAIQTL-----LENSNSNVLPIVVACQTNHAVDQILLQLLR---------EGASVIRLGRRTN-- 445
                 789************96.**********************.....567899************************.........999*********4.. PP

      AAA_11 101 seavksvsleekvekrlekee.............................................................................. 121
                  +++k+vs+ ek+++ ++  +                                                                              
  EPX73565.1 446 VPEIKEVSVYEKIKSVRNTFSrfikdfkkkkgrlmkqmlnimsnfsseyvtltylhsqgiittaqlqslvensawvdtvfddddsaeekqieswlgemk 544
                 889999999999988887654555555566666666666666666666666666666666666665555555555555555555555555555555555 PP

      AAA_11 122 .....kaqlakeiskeleklakelrafeeeeek.................................................................. 149
                                                 k                                                                  
  EPX73565.1 545 idlvtP--------------------------Keivhgteeelqieaeqleeleqetkeslidedelhgvfvefkrkfdfyekvqlhskefkgflafen 617
                 555553..........................0555555555555555555555555558899999999****************************** PP

      AAA_11 150 ..............eklkkskekskskleqerrklkkerkelskeleeaeesleeevldeaeivltTlsga..gsklleklakkfdvviIDEAaqavEp 232
                               + l+ ++e    ++e e+r l++   +l+ke+ +  ++  + +l++a++v  T +g    ++ le++  + +++ I EAa  +E 
  EPX73565.1 618 iwdipefsrgmvykHWLQLAYE----NAESELRRLHRVYIKLDKEISSCHNKRVAALLRNANVVGMTTTGLnkYRHILESI--RPKICFIEEAANILEG 710
                 *******999665444444444....4444555555555566788888888888999*******99999883346788888..9*************** PP

      AAA_11 233 stliPlrlgakkvvLvGDpkQLpat 257
                  ++ + +   ++++L+GD+kQL++ 
  EPX73565.1 711 PVIPAVFPSLEQLILIGDHKQLRPS 735
                 ***********************95 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   0.0   4.2e-10   4.2e-07       1      67 [.     368     432 ..     368     596 .. 0.75
   2 ?    5.0   0.0     0.028        28     105     143 ..     698     734 ..     625     737 .. 0.72
   3 ?   -3.1   0.0       9.2   9.2e+03      34      62 ..     839     866 ..     833     885 .. 0.74

  Alignments for each domain:
  == domain 1  score: 30.4 bits;  conditional E-value: 4.2e-10
      AAA_19   1 qreave.alkekvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAakelrerlaalga 67 
                 q +a +  l++k+ l+ ++pGtGKT v  ++++ l+e+ + ++ +i++++ t++A++++  +l   ++
  EPX73565.1 368 QLKAYQsILSRKLALIQGPPGTGKTFVALKAIQTLLENSNSNVLPIVVACQTNHAVDQILLQL---LR 432
                 56777778999**********************************************997766...33 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.028
      AAA_19 105 llivDEfqdvdelqyrLlkallgekkklllvGDpdQliy 143
                 + ++ E+ ++  l+  ++ a++++ ++l+l+GD++Ql +
  EPX73565.1 698 ICFIEEAANI--LEGPVIPAVFPSLEQLILIGDHKQLRP 734
                 5555565544..455678899977799*********965 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 9.2
      AAA_19  34 lvelggvkpeeillvaftgrAakelrerl 62 
                 ++ l+gv+p +i++++f g A k+l e+l
  EPX73565.1 839 YLILHGVNPLQITCLTFYG-AQKKLIENL 866
                 5556789999999999987.455555544 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.0   0.0   3.2e-09   3.2e-06       2      63 ..     364     427 ..     363     466 .. 0.81
   2 ?    1.9   0.0      0.16   1.6e+02     107     130 ..     715     734 ..     646     737 .. 0.68

  Alignments for each domain:
  == domain 1  score: 27.0 bits;  conditional E-value: 3.2e-09
      AAA_30   2 lnaeQaaavealltsgdrvavltGpAGtGKtt.alkalreaweaag...grviglAptgkaAkvLa 63 
                 l+++Q +a +++l+ +  +a+++Gp+GtGKt+ alka++ ++e+++    +++++  t+ a +++ 
  EPX73565.1 364 LDKSQLKAYQSILSRK--LALIQGPPGTGKTFvALKAIQTLLENSNsnvLPIVVACQTNHAVDQIL 427
                 7899********9888..9************8459999*****99856667778888888888754 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.16
      AAA_30 107 allkaaekagakvilvGDerQlas 130
                 a++ ++e    ++il+GD++Ql +
  EPX73565.1 715 AVFPSLE----QLILIGDHKQLRP 734
                 5555554....49********975 PP

>> UvrD-helicase  UvrD/REP helicase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.2      0.54   5.4e+02     105     185 ..       9      86 ..       1     178 [. 0.51
   2 ?   -2.0   0.0         2     2e+03      82     152 ..     237     310 ..     216     337 .. 0.66
   3 !   21.7   3.1   1.2e-07   0.00012       2     228 ..     365     617 ..     364     732 .. 0.64
   4 ?   -3.6   0.0       6.1   6.1e+03      30      54 ..     833     856 ..     831     879 .. 0.74

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.54
                    HHHHHGGTTSHTTTEEECHHHHHHCCHHHHHHHHHSCHSHTTTTHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHCHHHHH CS
  UvrD-helicase 105 lkkeanrigldpnfrildeedeedlkqqellkelleksaddslnldkkkleklikelsksrnikkeelslskskaeelrel 185
                    l+ + ++    + ++i d+ ++ +++ qe++++++   +d  ++++ ++ + +i ++s + +++ ++ +++++ ++  r++
     EPX73565.1   9 LEHNPQEGVKLSTLEIWDQLKS-TTDAQEVVFDDIP-DEDLIHSMTIHQRK-QIDNYSGNYAVDEWDDDMNNYNITPNRNA 86 
                    5555555556677788888884.5555555555554.35555666666644.77777777777755555444433332222 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 2
                    HHHHHHHCTTSEEEEHHHHHHHHHHHHHGGTT...........SHTTTEEECHHHHHHCCHHHHHHHHHSCHSHTTTTHHHH CS
  UvrD-helicase  82 lrlalqnlseanisTlHsfcqkilkkeanrig...........ldpnfrildeedeedlkqqellkelleksaddslnldkk 152
                    + l++ n++++ ++T+ s  +  l+k+ ++i+            +++f +++ +++          e  ++  ++ ++++++
     EPX73565.1 237 VLLSQDNFEHIRVGTVCSRPLSGLRKYPHEIDvffhdlnfeldSRKKFVMIEATSG--------YWEAYKHVLTNLQKISEH 310
                    55678899999999999999999999999999999555555554444444444443........333333333333344444 PP

  == domain 3  score: 21.7 bits;  conditional E-value: 1.2e-07
                    SHHHHHHHHS..-SSEEEEEE-TTSSHHHHHHHHHHHHHHTSSSTGGGEEEEESSHHHHHHHHHHHHH...........................H CS
  UvrD-helicase   2 npeqreaias..lggpilveAsAGsGKTfvlaerilrlikeeeiepdrilvvTFTnkAaeElkeRiee...........................a 68 
                    +++q +a +s  +++  l+   +G+GKTfv  + i  l+++ + ++  i+v   Tn A + +   + +                            
     EPX73565.1 365 DKSQLKAYQSilSRKLALIQGPPGTGKTFVALKAIQTLLENSNSNVLPIVVACQTNHAVDQILLQLLRegasvirlgrrtnvpeikevsvyekikS 460
                    6789999999877888999**********************************************9999999998888887776665544332220 PP

                    HHHCCHHCTT-H.........HHHHHHHHCTTSEEEEHHHHHHHHHHHHHGGTT...SHTTTEEECHHHHHHCCHHHHHHHHHSCHSHTTTTHHHH CS
  UvrD-helicase  69 lkkaeqessdde.........rlrlalqnlseanisTlHsfcqkilkkeanrig...ldpnfrildeedeedlkqqellkelleksaddslnldkk 152
                                          +++++  l + +   +  f ++++   + +++      +++ l e++   + + +++ ++      +++++++ 
     EPX73565.1 461 -----------VrntfsrfikDFKKKKGRLMKQMLNIMSNFSSEYVTLTYLHSQgiiTTAQLQSLVENS---AWVDTVFDDDDS---AEEKQIESW 539
                    ...........1223455555566666666666666666666666665555555443222222222222...334444444433...332333333 PP

                    HHHHHHHHHHCCCCCHHHHCCCHHHHHCHHHHHHHHHHHTTCCTTHHCHSS...TSCSHHHHHHHHHHHHHHHHHHHHT CS
  UvrD-helicase 153 kleklikelsksrnikkeelslskskaeelrelvskakekqlspkelkkaf...ekasdlqkkiaeflkeyqeqkkeen 228
                      e ++++l  +++i   +++  ++ ae+l+el ++ ke+++++ el   f   +++ d+++k++   ke++  + +en
     EPX73565.1 540 LGE-MKIDLVTPKEIVHGTEEELQIEAEQLEELEQETKESLIDEDELHGVFvefKRKFDFYEKVQLHSKEFKGFLAFEN 617
                    333.445566666666777777777777777777777777777777766665444444444444444444444444444 PP

  == domain 4  score: -3.6 bits;  conditional E-value: 6.1
                    HHHHHHHHHHTSSSTGGGEEEEESS CS
  UvrD-helicase  30 laerilrlikeeeiepdrilvvTFT 54 
                    l++   +li ++ ++p +i ++TF 
     EPX73565.1 833 LVQFASYLILHG-VNPLQITCLTFY 856
                    677777889988.999999999995 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   1.4   1.5e-06    0.0014      23      72 ..     377     428 ..     361     613 .. 0.76

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 1.5e-06
                 TTSEEEEEESTTSTHHHHHHHHHHHH-S.......-EEEEESSHHHHHHHHH CS
      ResIII  23 rdkrglikmaTGtGKTlvaaklierllkkgkee..kflflvprkslleqtle 72 
                  +k +li+ + GtGKT+va+k+i+ ll++ + +   +++ +++++ ++q l 
  EPX73565.1 377 SRKLALIQGPPGTGKTFVALKAIQTLLENSNSNvlPIVVACQTNHAVDQILL 428
                 467789**********************977666666666677776666664 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.1   2.1e-06    0.0021       1      55 [.     378     435 ..     378     487 .. 0.56
   2 ?    0.0   0.1      0.39   3.9e+02     335     360 ..     903     930 ..     879     932 .. 0.77

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 2.1e-06
     DUF2075   1 kavvlVtGvaGtGKtvvllnllael.eddeeer..tavylsvNhplvlvlrealakke 55 
                 +++ l++G +GtGKt v+l+++ +l e+++++    +v    Nh+  ++l + l++ +
  EPX73565.1 378 RKLALIQGPPGTGKTFVALKAIQTLlENSNSNVlpIVVACQTNHAVDQILLQLLREGA 435
                 5789*******************99744433320023333445555555544444444 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.39
     DUF2075 335 eekaqkllkNayrV..LLtRGrkGlyiy 360
                 +++   +l  +yrV   L+R+r+G+y +
  EPX73565.1 903 DQRSVGFLVSTYRVcvALSRARRGIYMF 930
                 555555667778752269********87 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   9.6e-07   0.00096       6      47 ..     365     406 ..     362     424 .. 0.81

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 9.6e-07
                 SHHHHHHHHHHHH-SEEEEE--TTSSTTHHHHHHHHHHHHTT CS
        PhoH   6 tkeQkeylealkkndivfaiGpaGtGKtylavalavealkkk 47 
                 +k+Q ++++++ + ++  + Gp GtGKt++a+ +  ++l+++
  EPX73565.1 365 DKSQLKAYQSILSRKLALIQGPPGTGKTFVALKAIQTLLENS 406
                 6799***************************97544444443 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.3   3.2e-06    0.0032       3     116 ..     367     476 ..     365     500 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 3.2e-06
                 HHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTT.STSEEEEEETTSSHHHHHHHHHTTCSE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   3 iQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkky.idlrvlliiggvaardqlskldngvdi 100
                  Q +a++ il+ +  l++++ G+GKT ++ + ++q+++e+ +++   +++ + t   + q+l +l + +   i+  +    ++v++ +++s+  ++++ 
  EPX73565.1 367 SQLKAYQSILSRKLALIQGPPGTGKTFVA-LKAIQTLLENSNSNVLPIVVACQTNHAVDQILLQLLREGASvIR--L-GRRTNVPEIKEVSVY-EKIKS 460
                 6999************************5.66778999988888888999999999999999998777775233..2.234566777777777.77888 PP

                 EEEEHHHHHHHHHCTS CS
                 xxxxxxxxxxxxxxxx RF
        DEAD 101 vvgtpgrlddllstgk 116
                 v  t +r+++ ++++k
  EPX73565.1 461 VRNTFSRFIKDFKKKK 476
                 8888877777664444 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   3.4e-06    0.0034      25     132 ..     379     474 ..     366     480 .. 0.61

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 3.4e-06
      AAA_16  25 elvllsGesGvGKsslv.rellralekd...ggif..lrgkcdqlesaipysalaqalareellrqlldeaesaeleawrekleealaavpelagaea. 116
                  l l+ G++G+GK+ ++ ++++  l ++   +  +  +   c+ +                + + q+l ++    ++  r   ++++ +++e++  e+ 
  EPX73565.1 379 KLALIQGPPGTGKTFVAlKAIQ-TLLENsnsN--VlpIVVACQTN----------------HAVDQILLQLLREGASVIRLGRRTNVPEIKEVSVYEKi 458
                 689**************54444.444441221..11244444444................55555555544445555555555666667778887778 PP

      AAA_16 117 srllellkrllallsr 132
                 ++++++++r+++  ++
  EPX73565.1 459 KSVRNTFSRFIKDFKK 474
                 9999999999955554 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.024        24       2      33 ..     382     410 ..     381     433 .. 0.71
   2 ?   -0.3   0.0      0.74   7.3e+02      86     102 ..     718     734 ..     667     754 .. 0.86
   3 !    9.0   0.0    0.0011       1.1     183     232 ..     869     929 ..     816     931 .. 0.73

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.024
  Viral_helicase1   2 vvhGvpGcGKStlirkllrtsliltvnrptae 33 
                      +++G pG GK+ +  k+++t   l +n+++++
       EPX73565.1 382 LIQGPPGTGKTFVALKAIQT---LLENSNSNV 410
                      699********988888877...333333333 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.74
  Viral_helicase1  86 skaklvilfGDplQipf 102
                      ++++++il+GD++Q   
       EPX73565.1 718 PSLEQLILIGDHKQLRP 734
                      578999********764 PP

  == domain 3  score: 9.0 bits;  conditional E-value: 0.0011
  Viral_helicase1 183 r.........evttvhevqGltfdkVtlvllketdlelis..esrenllvAlTRhrkslvi 232
                      +          v tv + qG++ d+  l l ++ d+  +    s   + vAl+R+r++++ 
       EPX73565.1 869 KhlpdekenmRVATVDGYQGEENDVILLSLVRNHDQRSVGflVSTYRVCVALSRARRGIYM 929
                      0444455556688*********9998877776666554447777999**********9976 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.3   4.1e-05      0.04       2      26 ..     382     414 ..     381     519 .. 0.57

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 4.1e-05
                 EEESSTTSSHHHHHHHHHHHH....THE....E CS
         AAA   2 llyGppGtGKTllakavakel....gve....f 26 
                 l+ GppGtGKT +a   +++l    +++    +
  EPX73565.1 382 LIQGPPGTGKTFVALKAIQTLlensNSNvlpiV 414
                 789***********9999986554333333331 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   7.4e-05     0.074       5      57 ..     378     427 ..     375     461 .. 0.75
   2 ?   -1.3   0.0       2.4   2.4e+03      39     102 ..     673     706 ..     632     743 .. 0.58

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 7.4e-05
      AAA_22   5 agilvvtGesGtGKTtllrrlleqldeeakaeeerpevv..fvtlpsstsskdll 57 
                 +++ ++ G++GtGKT+++ +  ++l e       ++ v+   v ++     +++l
  EPX73565.1 378 RKLALIQGPPGTGKTFVALKAIQTLLEN-----SNSNVLpiVVACQTNHAVDQIL 427
                 78899**************999999654.....3455543333333333455554 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 2.4
      AAA_22  39 rpevvfvtlpsstsskdllrellralglelkaerlsseellealeqalraravielliiDEaqh 102
                 ++ vv +t +++++ + +l+ +                             + +++  i+Ea +
  EPX73565.1 673 NANVVGMTTTGLNKYRHILESI-----------------------------R-PKICFIEEAAN 706
                 3344444444444444433333.............................2.35555555555 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   8.3e-05     0.083      14      57 ..     373     416 ..     361     482 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 8.3e-05
      ATPase  14 gGipegrvvlitGepGtGKtifalqFlikgaekygepgvfvtve 57 
                 + i +++  li G pGtGKt++al+ + + +e+ + +++ + v 
  EPX73565.1 373 QSILSRKLALIQGPPGTGKTFVALKAIQTLLENSNSNVLPIVVA 416
                 66889999****************99999888888888877665 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00024      0.24       3      30 ..     382     413 ..     381     440 .. 0.77
   2 ?   -3.3   0.0       8.2   8.2e+03      65      85 ..     695     716 ..     668     724 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00024
                 EEE--SSSSHHHHHHHGGGGB....S--EEEE CS
       AAA_5   3 lLvGppGtgKselaerlaaal....nreveyv 30 
                 l++GppGtgK+++a +  + l    n++v+ +
  EPX73565.1 382 LIQGPPGTGKTFVALKAIQTLlensNSNVLPI 413
                 789***********998888878665555544 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 8.2
                 G-SEEEEESGGG--.HHHHHHH CS
       AAA_5  65 egeilvlDEverae.sevlnsL 85 
                 +++i++++E  ++    v++++
  EPX73565.1 695 RPKICFIEEAANILeGPVIPAV 716
                 7899999998776545555555 PP

>> Pox_Ag35  Pox virus Ag35 surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.9   0.00014      0.14      17      94 ..      21     121 ..       9     139 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00014
    Pox_Ag35  17 tleeiRahlrseaedadkkeddifpeDieiPspkqekkkr...................attprkk.....pakkekkkkeeekeeaaeeeeledseed 91 
                 tl ei ++l+s+++ ++ + ddi  eD+    + +++k+                      tp ++      a+k+k++ ++++ +  e+    d++++
  EPX73565.1  21 TL-EIWDQLKSTTDAQEVVFDDIPDEDLIHSMTIHQRKQIdnysgnyavdewdddmnnyNITPNRNapaspEALKSKATPSKKQVRMRERLADADENDT 118
                 55.799*********999**********987666666655899****************5566555322215555555555555555555555555555 PP

    Pox_Ag35  92 een 94 
                 e+n
  EPX73565.1 119 ENN 121
                 555 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00023      0.23      32      75 ..     377     421 ..     368     435 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00023
       AAA_7  32 nkkpvllvGptGtGKtviikdllkkld.kekylsltinfsaqtsa 75 
                 ++k  l+ Gp GtGKt ++ + +++l  +++ ++l i +  qt+ 
  EPX73565.1 377 SRKLALIQGPPGTGKTFVALKAIQTLLeNSNSNVLPIVVACQTNH 421
                 677899************999666655144444444444444443 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   0.00041      0.41      33      53 ..     378     398 ..     369     415 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00041
      AAA_25  33 gelallaGapgtGKttlaldl 53 
                  +lal+ G+pgtGKt++al  
  EPX73565.1 378 RKLALIQGPPGTGKTFVALKA 398
                 6899**************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (991 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       970  (0.0541023); expected 358.6 (0.02)
Passed bias filter:                      657  (0.0366445); expected 358.6 (0.02)
Passed Vit filter:                        81  (0.00451782); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.91u 0.35s 00:00:01.26 Elapsed: 00:00:00.56
# Mc/sec: 5335.11
//
Query:       EPX73566.1  [L=249]
Description: ribosomal protein subunit L22 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.5e-19   69.4   0.4    3.7e-19   68.9   0.4    1.2  1  Ribosomal_L22  Ribosomal protein L22p/L17e
  ------ inclusion threshold ------
       0.06   13.5   0.1       0.12   12.4   0.0    1.5  2  DUF2656        Protein of unknown function (DUF2656)


Domain annotation for each model (and alignments):
>> Ribosomal_L22  Ribosomal protein L22p/L17e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.9   0.4   4.1e-23   3.7e-19       2     103 .]     108     210 ..     107     210 .. 0.96

  Alignments for each domain:
  == domain 1  score: 68.9 bits;  conditional E-value: 4.1e-23
                    EEEEESS-HHHHHHHHHHHTTSBHHHHHHHHHT-SSTTHHHHHHHHHHHHHHHH..HT.-GGGEEEEEEEEEEEEEEEEEEEESTTEEEEEEEEEE CS
  Ribosomal_L22   2 kgsnlrvsfkklrevarlIrgmkveeAlkyLkfskkkaakfvlklLknaeanaelkgl.dvdslvIeeiqvnkgpklkrrtyrArGrinpirkspc 96 
                    +++ lr s kk+ +++r+I +++  +Al ++kfs+k+++k +++ L +a++ a +k++ d+++l+I++++v+k+++lk++  r+rG     r++ +
     EPX73566.1 108 QSKILRSSLKKAGNLCRQISRKPFYHALLQMKFSEKRVSKSIASALVKAREDAVTKAGlDEKTLYIDQAWVGKATYLKKLVTRGRGGHAVQRRPRV 203
                    56779************************************************999877************************************* PP

                    EEEEEEE CS
  Ribosomal_L22  97 hievvlk 103
                     ++v+lk
     EPX73566.1 204 RVTVLLK 210
                    ****996 PP

>> DUF2656  Protein of unknown function (DUF2656)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0      0.85   7.6e+03      70      83 ..      48      61 ..      32      84 .. 0.55
   2 ?   12.4   0.0   1.4e-05      0.12      24      90 ..     109     171 ..      93     182 .. 0.82

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 0.85
     DUF2656 70 kalaqkRkelqkge 83
                +a++q   +l++ge
  EPX73566.1 48 RAWNQAPGSLETGE 61
                34444333333333 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 1.4e-05
     DUF2656  24 aevfadglsasseiqcreledhPhWlveilfsesklspeqvgeecakalaqkRkelqkgeeaapdiL 90 
                  ++++++l++  +  cr++  +P++   +   + k+s ++v++++a al++ R++  +++  ++++L
  EPX73566.1 109 SKILRSSLKKAGN-LCRQISRKPFYHALL---QMKFSEKRVSKSIASALVKAREDAVTKAGLDEKTL 171
                 5788888887765.5********999888...678999****************9988887777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       596  (0.0332422); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1800.54
//
Query:       EPX73567.1  [L=557]
Description: zf-CCCH type zinc finger protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.4e-11   42.6  11.9      9e-06   25.4   2.8    2.3  2  zf-CCCH_4  CCCH-type zinc finger
      4e-09   36.1  11.1    0.00015   21.6   3.7    2.5  2  zf-CCCH    Zinc finger C-x8-C-x5-C-x3-H type (and similar)
    1.2e-08   34.7  17.9    2.6e-05   24.1   4.7    2.4  2  zf_CCCH_4  Zinc finger domain
    1.6e-07   32.0   6.0     0.0043   17.7   0.8    2.6  2  Torus      Torus domain
     0.0002   21.5   0.2    0.00038   20.7   0.2    1.4  1  zf-CCCH_3  Zinc-finger containing family
  ------ inclusion threshold ------
        0.4   11.2  16.1        0.1   13.1   5.8    2.4  2  zf-CCCH_2  RNA-binding, Nab2-type zinc finger


Domain annotation for each model (and alignments):
>> zf-CCCH_4  CCCH-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   2.8     3e-09     9e-06       1      21 [.      46      66 ..      46      67 .. 0.97
   2 !   22.4   1.7   2.5e-08   7.6e-05       1      21 [.      73      93 ..      73      94 .. 0.96

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 3e-09
   zf-CCCH_4  1 rlCpyfakGsCrfGdnCrFsH 21
                ++C++f +GsC+ G+nC FsH
  EPX73567.1 46 VPCKFFRHGSCTAGENCPFSH 66
                69******************* PP

  == domain 2  score: 22.4 bits;  conditional E-value: 2.5e-08
   zf-CCCH_4  1 rlCpyfakGsCrfGdnCrFsH 21
                ++C+y +kG+C+fG +C  sH
  EPX73567.1 73 PVCKYHLKGNCKFGTKCALSH 93
                69*****************99 PP

>> zf-CCCH  Zinc finger C-x8-C-x5-C-x3-H type (and similar)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   3.7   5.1e-08   0.00015       3      26 ..      45      67 ..      44      68 .. 0.90
   2 !   18.9   0.8   3.5e-07    0.0011       3      25 ..      72      93 ..      70      95 .. 0.87

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 5.1e-08
                CHCBCHHHHHS--TTGGG-SSBSC CS
     zf-CCCH  3 telCrffmrtGyCkyGdrCkFaHg 26
                +++C+ f+r+G+C  G++C+F+H+
  EPX73567.1 45 HVPCK-FFRHGSCTAGENCPFSHS 67
                579**.8888*************8 PP

  == domain 2  score: 18.9 bits;  conditional E-value: 3.5e-07
                CHCBCHHHHHS--TTGGG-SSBS CS
     zf-CCCH  3 telCrffmrtGyCkyGdrCkFaH 25
                ++ C+++++ G Ck+G +C  +H
  EPX73567.1 72 RPVCKYHLK-GNCKFGTKCALSH 93
                899******.*********7555 PP

>> zf_CCCH_4  Zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   4.7   8.5e-09   2.6e-05       1      19 []      48      66 ..      48      66 .. 1.00
   2 !   16.2   5.3   2.7e-06    0.0081       1      15 [.      75      89 ..      75      90 .. 0.98

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 8.5e-09
   zf_CCCH_4  1 CkfflqGtCkkGdkCrFaH 19
                Ckff  G+C+ G++C+F+H
  EPX73567.1 48 CKFFRHGSCTAGENCPFSH 66
                ******************* PP

  == domain 2  score: 16.2 bits;  conditional E-value: 2.7e-06
   zf_CCCH_4  1 CkfflqGtCkkGdkC 15
                Ck+ l+G+Ck+G+kC
  EPX73567.1 75 CKYHLKGNCKFGTKC 89
                *************** PP

>> Torus  Torus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.8   1.4e-06    0.0043      67      96 ..      42      71 ..      31      73 .. 0.87
   2 !   17.3   0.2     2e-06     0.006      69      98 ..      71     100 ..      68     106 .. 0.87

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 1.4e-06
                STT--B-HHHHHT--SSGGG-SSB-S---S CS
       Torus 67 ekesyfClfFarGlCakGkkCeylHrlPte 96
                + +++ C fF +G C+ G++C + H+l te
  EPX73567.1 42 NLQHVPCKFFRHGSCTAGENCPFSHSLETE 71
                567789*******************99765 PP

  == domain 2  score: 17.3 bits;  conditional E-value: 2e-06
                 T--B-HHHHHT--SSGGG-SSB-S---SS- CS
       Torus  69 esyfClfFarGlCakGkkCeylHrlPteed 98 
                 e+ +C ++ +G C+ G+kC+  H+lP ++ 
  EPX73567.1  71 ERPVCKYHLKGNCKFGTKCALSHSLPVNDS 100
                 5689**********************8876 PP

>> zf-CCCH_3  Zinc-finger containing family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.2   1.3e-07   0.00038       7      54 ..      47      93 ..      41     137 .. 0.86

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 1.3e-07
   zf-CCCH_3  7 dcyffyystctkGdscpfrheeaalGsetvctlWqegrc.lrevckfrh 54
                 c ff +  ct G++cpf h+  +     vc++  +g+c + ++c + h
  EPX73567.1 47 PCKFFRHGSCTAGENCPFSHSLET--ERPVCKYHLKGNCkFGTKCALSH 93
                6*******************7443..357**********6678999988 PP

>> zf-CCCH_2  RNA-binding, Nab2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   5.8   3.3e-05       0.1       1      17 [.      47      66 ..      47      66 .. 0.99
   2 ?    3.5   2.6     0.037   1.1e+02       2      13 ..      75      89 ..      75      93 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 3.3e-05
   zf-CCCH_2  1 pCrffpn..C.tnpkCpFaH 17
                pC+ff +  C  +++CpF+H
  EPX73567.1 47 PCKFFRHgsCtAGENCPFSH 66
                9******************* PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.037
   zf-CCCH_2  2 Crffpn..C.tnpkC 13
                C++  +  C ++ kC
  EPX73567.1 75 CKYHLKgnCkFGTKC 89
                888888889999999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (557 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       344  (0.0191868); expected 358.6 (0.02)
Passed bias filter:                      181  (0.0100954); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.52u 0.22s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 4130.99
//
Query:       EPX73568.1  [L=566]
Description: CUE domain-containing protein Cue3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-07   31.0   0.2      4e-07   29.6   0.2    1.8  1  CUE       CUE domain


Domain annotation for each model (and alignments):
>> CUE  CUE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.6   0.2   2.2e-11     4e-07       2      42 .]     268     308 ..     267     308 .. 0.95

  Alignments for each domain:
  == domain 1  score: 29.6 bits;  conditional E-value: 2.2e-11
                 HHHHHHHHHHSTTS-HHHHHHHHHHCTTTHHHHHHHHHHCC CS
         CUE   2 eqmletLkemFPdldeevIravLrasngnvEatinaLLegs 42 
                 +++++ L e+FP+l+ e  ++ L  sng ++++++a+L +s
  EPX73568.1 268 SNDVQNLVELFPQLTIEKAADYLAHSNGQMDLACEAILTNS 308
                 689***********************************876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (566 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       787  (0.0438954); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.22s 00:00:00.77 Elapsed: 00:00:00.99
# Mc/sec: 1731.38
//
Query:       EPX73569.1  [L=363]
Description: mannose-1-phosphate guanyltransferase Mpg1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.9e-55  188.2   0.0    3.6e-55  187.3   0.0    1.4  2  NTP_transferase  Nucleotidyl transferase
      1e-13   50.4   5.4    1.1e-11   43.9   1.3    3.6  3  Hexapep          Bacterial transferase hexapeptide (six repea
    4.9e-11   43.2   0.0    7.9e-11   42.6   0.0    1.4  1  NTP_transf_3     MobA-like NTP transferase domain
    4.8e-06   26.2   1.0    4.8e-06   26.2   1.0    3.4  4  Hexapep_2        Hexapeptide repeat of succinyl-transferase
     0.0014   16.8   0.1     0.0043   15.3   0.2    1.7  2  DUF4954          Domain of unknown function (DUF4954)
  ------ inclusion threshold ------
       0.05   13.3   0.0      0.075   12.8   0.0    1.3  1  IspD             2-C-methyl-D-erythritol 4-phosphate cytidyly


Domain annotation for each model (and alignments):
>> NTP_transferase  Nucleotidyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  187.3   0.0   1.2e-58   3.6e-55       1     242 [.       2     230 ..       2     236 .. 0.95
   2 ?   -2.8   0.0       1.3   3.8e+03     103     117 ..     322     336 ..     314     339 .. 0.79

  Alignments for each domain:
  == domain 1  score: 187.3 bits;  conditional E-value: 1.2e-58
                      EEEEE--S--GGGTTCCTTSSGGGSEETTETETTHHHHHHHHHTT-SEEEEEEETTTHHHHHHHHTTSGGGTSEEEEEEESS--BGGHHHHHTH CS
  NTP_transferase   1 kavILaGGsGtRLwPLtrtlakklvpvlgkerliqatlsrlansgieeiivvltqehsflveeqlkegskfgvevlialepegkgtAdAvalaa 94 
                      ka+IL+GG GtRL+PLt tl+k+lv +++  ++i +++++la++g+++i++ ++++ + +v+   k +++++v++++++e+e+ gtA+++ala+
       EPX73569.1   2 KALILVGGFGTRLRPLTLTLPKPLVEFGNR-PMILHQVEALAAAGVTDIVLAVNYRPEIMVQALKKYEEEYKVRITFSVENEPLGTAGPLALAR 94 
                      799***************************.*************************************************************** PP

                      HHHTTSSE..EEEEETTEEEESTTHHHHHHHHHTHSSTTSEEEEEEESS-CTTSEEEEEC..TTSBEEEEECS-SSHSHCSEECCSEEEEETTH CS
  NTP_transferase  95 elledeksdelvlvLggDhlikdayeeavkkaiekaakgtvtfgivpveeateyGviead..eegrverfvEKPkeakaselassGiYvfnsev 186
                      ++l++++s   ++vL++D+++++ + ++ k++++++a  + t+++++ve++++yGv+ +   +e  +erfvEKP+e   s+ +++GiY+ n++v
       EPX73569.1  95 DILGKDNS--PFFVLNSDVICEYPFGDLAKFHKAHGA--EGTIVVTKVEDPSKYGVVVHYpnSESLIERFVEKPSEFV-SNRINAGIYILNPSV 183
                      ******98..9**************************..99*****************9965666*************.*************** PP

                      HHHHHHCCHHHTTSSCHHHHHHHHHHHTTEEEEEECSTTEE-EEEXSSHHHHHHHH CS
  NTP_transferase 187 llflakdleelkrgedeitdilpkaleegkvalaflfkdaeyWsDvGtldsllean 242
                      l+ +       +r ++  ++++p+++++++ + +f+ +   yW+DvG+++++l+ +
       EPX73569.1 184 LDRI------QPRPTSIEKEVFPAMVKDKQLH-SFDLEN--YWMDVGQPKDYLTGT 230
                      ****......4788899999*******98887.678888..9**********9866 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.3
                      ..EEEEETTEEEEST CS
  NTP_transferase 103 delvlvLggDhlikd 117
                       e+v vLg+D++++d
       EPX73569.1 322 LENVSVLGDDVVVND 336
                      57899******9987 PP

>> Hexapep  Bacterial transferase hexapeptide (six repeats)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.9   1.3   3.8e-15   1.1e-11       1      34 [.     261     294 ..     261     296 .. 0.94
   2 ?    3.4   0.0     0.022        67      20      35 ..     308     323 ..     305     324 .. 0.86
   3 ?    2.9   0.1     0.033        97      12      33 ..     324     345 ..     320     348 .. 0.71

  Alignments for each domain:
  == domain 1  score: 43.9 bits;  conditional E-value: 3.8e-15
                 TEEEETTEEE-TTEEEETTEEE-TTEEEETTEEE CS
     Hexapep   1 stvIGsnvlIgpfaviggnVkIGdnvkIgagvvi 34 
                 s++IG+n++Igp++vig+nV+IGd+v++ +++ +
  EPX73569.1 261 SATIGKNCKIGPNVVIGPNVTIGDGVRLQRCAIL 294
                 689***************************9987 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.022
                 EEE-TTEEEETTEEEE CS
     Hexapep  20 VkIGdnvkIgagvvig 35 
                 +++G n+++g+++++ 
  EPX73569.1 308 TIVGWNSTLGSWSRLE 323
                 79*********99875 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.033
                 TTEEEETTEEE-TTEEEETTEE CS
     Hexapep  12 pfaviggnVkIGdnvkIgagvv 33 
                 + +v+g++V++ d  ++  g+ 
  EPX73569.1 324 NVSVLGDDVVVNDEIYVNGGSI 345
                 6688888888888777766665 PP

>> NTP_transf_3  MobA-like NTP transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.6   0.0   2.6e-14   7.9e-11       1     123 [.       3     138 ..       3     187 .. 0.73

  Alignments for each domain:
  == domain 1  score: 42.6 bits;  conditional E-value: 2.6e-14
                   EEEEEESS-TTTTT.....THHHHCCCCCCHHHHHHHHHCTT.-CEEEEECSH.C.....HHHHHHTTCTS-E...EE-TTSS.-SHHHHHHHHHHH CS
  NTP_transf_3   1 aviLAGGrSsRmgg.....dKallplggkpllervldalraagvdevvvvggd.e.....evlaalarlgvrv...vededpg.kgplaslaaalra 82 
                   a+iL GG ++R+       +K+l+++g++p++ ++++al+aagv ++v+++++ +     +++++ ++++vr+   ve+e+ g +gpla  +  l +
    EPX73569.1   3 ALILVGGFGTRLRPltltlPKPLVEFGNRPMILHQVEALAAAGVTDIVLAVNYrPeimvqALKKYEEEYKVRItfsVENEPLGtAGPLALARDILGK 99 
                   79**********8444668**********************************54443333333335667776444556554436666666666664 PP

                   H.SSSCEEEEETT-TT.--HHHHHHHHHCHHHHTSSEEEEES CS
  NTP_transf_3  83 aadadavlvlacDmPl.ltpelverllaaaaasgadvvvpty 123
                     d+++++vl  D+++ ++   ++++ +a+  +++ +vv + 
    EPX73569.1 100 --DNSPFFVLNSDVICeYPFGDLAKFHKAHG-AEGTIVVTKV 138
                   ..7999*****99988455555666666543.3344544444 PP

>> Hexapep_2  Hexapeptide repeat of succinyl-transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.1       3.2   9.7e+03      26      32 ..     172     178 ..     172     179 .. 0.78
   2 ?   -1.9   0.0         1     3e+03       1       9 [.     191     199 ..     191     199 .. 0.89
   3 !   26.2   1.0   1.6e-09   4.8e-06       3      26 ..     263     288 ..     261     289 .. 0.93
   4 ?    1.3   0.6     0.096   2.9e+02       3      26 ..     309     334 ..     307     346 .. 0.57

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 3.2
                 E-TT-EE CS
   Hexapep_2  26 vgaGvvi 32 
                 + aG++i
  EPX73569.1 172 INAGIYI 178
                 5699998 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1
                 .EEE-TT-E CS
   Hexapep_2   1 pviIGdnCl 9  
                 p++I++ ++
  EPX73569.1 191 PTSIEKEVF 199
                 89****987 PP

  == domain 3  score: 26.2 bits;  conditional E-value: 1.6e-09
                 EE-TT-EE-TT-EES..EEE-TT-EE CS
   Hexapep_2   3 iIGdnCliGanagiG..vslGdncvv 26 
                 +IG+nC iG+n +iG  v++Gd++ +
  EPX73569.1 263 TIGKNCKIGPNVVIGpnVTIGDGVRL 288
                 7*************999******987 PP

  == domain 4  score: 1.3 bits;  conditional E-value: 0.096
                 EE-TT-EE-TT-E.ESEE.E-TT-EE CS
   Hexapep_2   3 iIGdnCliGanag.iGvs.lGdncvv 26 
                 i+G n+ +G+ +    vs lGd++vv
  EPX73569.1 309 IVGWNSTLGSWSRlENVSvLGDDVVV 334
                 56666666665553222215666666 PP

>> DUF4954  Domain of unknown function (DUF4954)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0      0.35   1.1e+03     182     225 ..     106     149 ..      98     153 .. 0.87
   2 !   15.3   0.2   1.4e-06    0.0043     187     266 ..     252     329 ..     248     349 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.35
     DUF4954 182 ilnaglikNvkigdyatiegasklengtinSskeapveiGegVi 225
                 +ln+++i    +gd a+ + a+  e + +  + e+p++ G  V 
  EPX73569.1 106 VLNSDVICEYPFGDLAKFHKAHGAEGTIVVTKVEDPSKYGVVVH 149
                 78999999999***********99999999999****9998876 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 1.4e-06
     DUF4954 187 likNvkigdyatiegasklengtinSskeapveiGegViledfiissGskikdgavisrcfvGqavklkkqfsaed.sllf 266
                 +i Nv i++ ati    k+    ++      v+iG+gV l+ + i + s++ d a ++ ++vG + +l+   ++e+ s+l+
  EPX73569.1 252 IIGNVLIDASATIGKNCKIGPNVVIG---PNVTIGDGVRLQRCAILKSSRVRDHAWVKSTIVGWNSTLGSWSRLENvSVLG 329
                 78999999999998777776555554...35899*****************************999999988888745555 PP

>> IspD  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   2.5e-05     0.075       2      55 ..       2      57 ..       1      75 [. 0.80

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2.5e-05
                EEEEECTTSSCTT-...SSS-GGGSEETTEEHHHHHHHHHHCTTTEEEEEEEE-GGG CS
        IspD  2 vvvipAAGsGkRmk...aglpKqflelkgqtllehtvdallaskavdkivvvvsedd 55
                 ++i   G+G+R++     lpK ++e  +++++ h v+al+a   v  iv++v+   
  EPX73569.1  2 KALILVGGFGTRLRpltLTLPKPLVEFGNRPMILHQVEALAA-AGVTDIVLAVNYRP 57
                5788899*****86222689********************99.66888999988655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (363 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       308  (0.0171789); expected 358.6 (0.02)
Passed bias filter:                      291  (0.0162307); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.45
# Mc/sec: 2414.01
//
Query:       EPX73570.1  [L=103]
Description: hypothetical protein SOCG_04968 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
      0.045   12.4   4.7      0.049   12.3   4.7    1.0  1  PKD_channel  Polycystin cation channel


Domain annotation for each model (and alignments):
>> PKD_channel  Polycystin cation channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   4.7   2.8e-06     0.049     335     412 ..       7      82 ..       1      87 [. 0.89

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 2.8e-06
                  -----HHHHHHHHHHHHHHHHHHSSSS-STTSSHHHHHHHHHHHHTT---HHHHHHH-TTHHHHHHHHHHHHHHHHHH CS
  PKD_channel 335 dvlgfalvivilflayaqlgvllfGtqasnfsnlvksiltlfrlilgdfqytelesgnrvLGpllllalvflvifill 412
                  d+   +l i++l l +  +    fG   +n s+l  s +t+++l + ++++++l   +r+ +  +l ++vf+ +f + 
   EPX73570.1   7 DLYLNSLKIALLALTFHTIHHCRFGATRQNPSTLLSSNFTCLSLFC-NMEFQAL-ASKRIPSNFFLRLFVFVFVFSFF 82 
                  6667788999*******************************88777.79*****.899**************999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       700  (0.0390429); expected 358.6 (0.02)
Passed bias filter:                      282  (0.0157287); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.28s 00:00:00.71 Elapsed: 00:00:00.46
# Mc/sec: 670.08
//
Query:       EPX73571.1  [L=345]
Description: mannosyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.5e-23   83.2   0.1    3.4e-23   82.1   0.1    1.6  1  Gly_transf_sug  Glycosyltransferase sugar-binding region cont
  ------ inclusion threshold ------
      0.053   12.9   0.1      0.053   12.9   0.1    1.7  2  Caps_synth      Capsular polysaccharide synthesis protein


Domain annotation for each model (and alignments):
>> Gly_transf_sug  Glycosyltransferase sugar-binding region containing DXD motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.1   0.1   3.8e-27   3.4e-23       1      92 [.      96     178 ..      96     184 .. 0.96

  Alignments for each domain:
  == domain 1  score: 82.1 bits;  conditional E-value: 3.8e-27
  Gly_transf_sug   1 perekkaieslakahpdyqvvvlskelekvrvaildlefllsdtpwfeeakkllplfialsDllRlaiLykyGGiYlDtDvivlkslrnsig 92 
                     pe++k a+es++  hp+yq++++++e++         +f+++++pwf+++++++p +++++D++R+++L++yGGiY+D+D  + ++l +s++
      EPX73571.1  96 PEKWKAAQESCRVMHPEYQYILWTDEMS--------RNFIVEHYPWFLKYFDTYPFNVQRADAIRYFVLFHYGGIYIDLDDGCRQPL-DSLL 178
                     799*************************........***************************************************.8876 PP

>> Caps_synth  Capsular polysaccharide synthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   5.9e-06     0.053      46     131 ..      82     165 ..      45     178 .. 0.85
   2 ?   -1.9   0.3      0.19   1.7e+03     145     170 ..     268     307 ..     260     335 .. 0.58

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 5.9e-06
  Caps_synth  46 nekkIWvlWlqGldnaPeiVkkciksvkknaedyevvlLtkdNieeYvdlpd.fiieklekgkisaahfSDllRleLLkkyGGvWiD 131
                   k+I + W    d+ Pe  k   +s +  +++y+++l t++  +++++ +  + ++ +++  ++  + +D +R  +L  yGG+ iD
  EPX73571.1  82 IPKIIHQTWK--TDTVPEKWKAAQESCRVMHPEYQYILWTDEMSRNFIVEHYpWFLKYFDTYPFN-VQRADAIRYFVLFHYGGIYID 165
                 5667888887..59999999***************************976651445556666665.5679****************9 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.19
  Caps_synth 145 lkkdfftf.kssekksnkislssW.............tsf 170
                  ++++ftf + s  ++++ sl  W              ++
  EPX73571.1 268 SDRSYFTFyEGSSWHEKDASLILWanrhilglifigfIAY 307
                 4677777777777788888888884444444333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (345 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       446  (0.0248759); expected 358.6 (0.02)
Passed bias filter:                      312  (0.017402); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2475.21
//
Query:       EPX73572.1  [L=362]
Description: hypothetical protein SOCG_02792 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (362 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       451  (0.0251548); expected 358.6 (0.02)
Passed bias filter:                      272  (0.015171); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2619.47
//
Query:       EPX73573.1  [L=348]
Description: protein phosphatase 2C Ptc1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-73  246.7   0.1    4.3e-73  246.1   0.1    1.3  1  PP2C      Protein phosphatase 2C


Domain annotation for each model (and alignments):
>> PP2C  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  246.1   0.1   2.4e-77   4.3e-73       5     258 .]      76     316 ..      72     316 .. 0.95

  Alignments for each domain:
  == domain 1  score: 246.1 bits;  conditional E-value: 2.4e-77
                 EEEECCCCSSHHEEEECCCCTCTTCCCCCCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHCHTTHHHHHHHHHHHHHHHHHHHHHHHHHCHCCT-EEE CS
        PP2C   5 aselqgarksmedahislanlesssgkssvsffavfdghggseaakyarehleeilksqksfeelekleqalrksfladtdeelksskantepsksGst 103
                  +++q++r+ medah +  ++   +g+++++f++v+dgh+g +a++y+++ l++il ++  +++++++ + l ++f +   ++++++ +    + +G+t
  EPX73573.1  76 EDKNQRWRRAMEDAHSCWYDF---GGNQDDGFIGVYDGHAGAQASDYCKKVLHKILLEKLRKYPDRLVTDLLDETFVE-VNDSIAKETK---NDVCGCT 167
                 6799***************99...58******************************9999999999************.5566666334...599**** PP

                 EEEEEEETTE......EEEEEESS-EEEEEETTEEEEECS---STTSHHHHHHHHHTT--EEECCEEETTTBSBSB-EE-GGGTCCCCCCSTSB---EE CS
        PP2C 104 avvalirgtk......lyvAnvGDSravLcrkgnakkeltedHkpsdedEreRIeeaggsvsngegrvngsLavsRalGDlelkpketeeqlvsaePdv 196
                 + +a++r ++      ly+AnvGD+r+vLcr+g+a+ +l++dHk+sde+E++R++++gg +   ++r+ng+Lav+RalGD++lk+      lvsa+P +
  EPX73573.1 168 SAIAFFRYENnrsrrvLYTANVGDARVVLCRDGKAI-RLSYDHKGSDENEARRVTQLGGAMV--QNRINGVLAVTRALGDTYLKE------LVSAHPFT 257
                 *******9999*************************.*************************..9*******************9......******** PP

                 EEEEE-TT.EEEEEEE-HHHHTTSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCCHHCHC CS
        PP2C 197 tsvkltee.defliLacdGlwdvlsdqeavdlvrdelekkkspeevaeelvdeaiargsedni 258
                 t++ +++  def+i+acdGlwdv+sdqeavd+vr+  +     +e+a +lv++a++r s+dni
  EPX73573.1 258 TETRIWPGhDEFFIVACDGLWDVISDQEAVDFVRKFTS----CREAALRLVEHALKRLSTDNI 316
                 **************************************....69*****************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (348 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       407  (0.0227007); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2590.98
//
Query:       EPX73574.1  [L=678]
Description: cell cycle regulated GATA-type transcription factor Ams2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.4e-11   43.8   5.2    2.6e-11   42.9   5.2    1.5  1  GATA           GATA zinc finger
  ------ inclusion threshold ------
        0.1   11.1   0.1       0.14   10.7   0.1    1.1  1  Terminase_GpA  Phage terminase large subunit (GpA)


Domain annotation for each model (and alignments):
>> GATA  GATA zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.9   5.2   2.9e-15   2.6e-11       1      35 [.     339     375 ..     339     376 .. 0.95

  Alignments for each domain:
  == domain 1  score: 42.9 bits;  conditional E-value: 2.9e-15
        GATA   1 CsnCgttkTplWRrg..pdgnksLCnaCGlyykkkgl 35 
                 C+nCg++kT++WR++  ++ +++LCnaCG+y+  +++
  EPX73574.1 339 CQNCGAIKTANWRNAnfMNSTIMLCNACGIYWTTRHS 375
                 ********************************98876 PP

>> Terminase_GpA  Phage terminase large subunit (GpA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1   1.6e-05      0.14     177     244 ..     314     377 ..     305     435 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 1.6e-05
  Terminase_GpA 177 Ptikgtsriealyeesdqr.ryyvpCphCgelqelsferlkwpegeaeekaryvCphcgslieehhkra 244
                    P+i+g  rie+   +s ++ +    C +Cg+   +++++ ++++     ++ ++C++cg  ++ +h  +
     EPX73574.1 314 PAIRGKDRIEEQLTNSLREgKIPPYCQNCGAIKTANWRNANFMN-----STIMLCNACGIYWTTRHSMR 377
                    8999999***999999999888889**************99977.....59***********9998655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (678 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       673  (0.037537); expected 358.6 (0.02)
Passed bias filter:                      494  (0.0275531); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.27s 00:00:00.90 Elapsed: 00:00:00.44
# Mc/sec: 4676.04
//
Query:       EPX73575.1  [L=1646]
Description: nucleoporin Nup186 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   6.4e-183  610.4  38.4   8.7e-183  610.0  38.4    1.1  1  Nup192    Nuclear pore complex scaffold, nucleoporins 186/192


Domain annotation for each model (and alignments):
>> Nup192  Nuclear pore complex scaffold, nucleoporins 186/192/205
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  610.0  38.4  4.9e-187  8.7e-183       1    1570 [.       4    1537 ..       4    1554 .. 0.86

  Alignments for each domain:
  == domain 1  score: 610.0 bits;  conditional E-value: 4.9e-187
                  .HHHHHHHHHHHHHHHHTT.XT...THHHHHHHHHHTHHHHHHTTXXXXXXHHHHHCHCC..XSEEEETTE.EEEXXHHHHHHHHHHHHHHTXXHHH CS
      Nup192    1 WspeafkeLynsieaassn.pe...sldelelllkklkqdLknllknppkneksRsqlkkektgkitlsdgseyklnqefiqealiLSdeldLdEla 93  
                  W+++ f++L+  ++  +sn ++   s++ l ++l+++ +d++++l   p+n++sR++l++   g+ +l++    kln++fi+ +l++S  l +dE+ 
  EPX73575.1    4 WELQHFSALFYLLQCIESNpSNpnvSSRLLMQCLDSYTKDFQKFLSVDPPNAESRKKLES---GEAELNGM-VCKLNETFIKLSLTISSKLSMDEIQ 96  
                  99999**9999999777775558889999*****************************77...*****888.************************* PP

                  HHHHHHHHCTHHH.HTTSXHHHHHHHHHHHHHHHHHHHHHHHHHHHT..XTTSXH......TTXXXXXXXXXHHHHHHHHHHHHHHHHHHHHHHHHH CS
      Nup192   94 aaeLlltaqeqqankpglslgevAvllYydrrkyilqiLryllqvaseeeedeek......llsswsteatklvtnileslkeikqllsklkdlldk 184 
                  +a Ll+++ e ++   +++ +++A + ++  r+ +l++L++l+++as+++ d e       +l++ +   + +v+ +++s     +++ + +   + 
  EPX73575.1   97 SACLLQKGVEASQ-ALDRTPVQAALYMFFLSREQLLESLELLTKIASLKDLDLEIekalrsFLNTLCNGGNDIVKTCCDSVTTLDTKITETLRNEAN 192 
                  *********9999.******************************9999887665444444322244444889*******************999*** PP

                  HHHHHHHSXXTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTXXXHHHHHHHHHH.HHHXXXXSHHHHHHHHHHHHHHTSSSSXXXHHHHHHHHHHHT CS
      Nup192  185 advlkeiqknrflgsikfrrdlLekehelLaqilfglvaqsglekedilkllkhLakkldknDdltlhllpallaafssledlsvledvrelhekit 281 
                   +vl+     +f++ +k + ++ + e e+ a il+ l++  + +++++++ll+ L+k  +   ++ +  lp+ll+++++l ++  l + +   +  t
  EPX73575.1  193 GQVLGIADVVDFQEYVKLSHEAHIAELETVAIILYQLSELGFVQQSHFESLLSTLSK-NEPTSKIAVLILPSLLSFLKKLLQIEFLPEGDGKLNVAT 288 
                  *****99***********************************************665.899*********************999999888888888 PP

                  SSSTTS.SSHH.............HHHHHHHHHHHHHGGGHHHHHHHHHHHH..........HHHHHTTHHHHHHHHH.HHHSX.XSSXXGGGTTTT CS
      Nup192  282 krleee.plvsdeeidlskwklkglkaaiklvflleligwckqepeertkkfdfkedieklieeaiedgafefllsva.aetsa.kewedslrydfr 375 
                   +l+    l+   +++ s+w ++++k ++  ++l++l + ck  + +  + +d++++i+++  + i++g+f  + +++ + +++ ++ +++  + f+
  EPX73575.1  289 PTLQHIhHLLI--KTAASSWRCPQFKQILGIWWLTYLNEACKNIA-NVPSFIDYTSTIKEPASDIIHAGVFSDIITFVmLPFRQsDDEQMEWSFSFK 382 
                  88833333333..49*****************************5.7889*********************87776651667756444444333333 PP

                  XXSXXXSXXXXSXSXX..XXHHHHHHHHHHHHHHHHHHHHHXHHHHHHHHHHHHHHH..HHXTTS.............TXXXHHHHHHHHHHHHHTT CS
      Nup192  376 slLqrkiprltpekll..lseefeefllrrlhtlitdfIsnmafvLtkLRdreedsllsveslqqegleppanleediaqkadLErfllliaylYen 470 
                         pr  p +    + + + + +++++ ++ ++fIs m+ +L+ LR  eed  l++ +++++     ++l+    +   +E+f+ l + +Y  
  EPX73575.1  383 -------PRSRPSTSWptIRPLLVDIIFSKFRSFCQSFISYMPEILKILRLLEEDKYLTNAAQSDT---ATEDLQ---HVFFPFEEFYHLLSSVYTY 466 
                  .......22222222233789999*********************************999988663...455555...4568*************** PP

                  XHHHHHHHHSXTTSHHHHHHHHHTSSXXHHHHHHHHHHHHTTXSSHHHHHHHHHHHCXTTXSS..XSSTTTBXXSHHHHHHHHHHHHHHHXXXX.XX CS
      Nup192  471 rpelaleFWsdkesnlygFiewassllpsplikaflkMLssLssgeenaraafnlLkdnsssa..gkkkrsssvswdhifksLsyYidklqepe.nd 564 
                  ++  +l+FW d es++ygF+ w+++ + +   ++f ++L s++++e+ a+++++l+ +  +++        +  +w+ if+ ++yYi++l  +  ++
  EPX73575.1  467 DKSWSLDFWLDIESDMYGFLTWSMESQIPGITTSFTLLLVSICTNEFTATKVHELMSEPAAETshFDNAAVTGTNWSYIFNVFHYYISQL--KPiQT 561 
                  *********************************************************988776555556678899***************..33122 PP

                  .XXXXXXXX.........XXXSXXXHHHHHHHHHHHHHHHHHHHHXHHHHHHHHCXTTTXHHHHHHHHHTSSXXHHHHHHHHHHHHHTTSXXHHH.H CS
      Nup192  565 lklrqkkqeneesiyrsraieeeleeeeivflsaflrLissvaknseearkallenaswqfldvllgLlsckvptpLkaailktLsaLvkkseee.a 660 
                  +        +++ + r ++ + e++ ++  +l++++ L+++v++ns++    l+e++  +++ + ++Ll+c +    + +ilk+L+++ ++s+    
  EPX73575.1  562 V-------VTSSGVARVHTEPGEIDINSSFILQGYVLLFAAVTRNSSQILVSLCEDQTLNPIGTFFELLECRLIESVRCTILKALESMSHQSSGVlN 651 
                  2.......24567889999999********************************************************************555556* PP

                  HHHHHHHHHHHHXXXXXXXX............XXXXXXXXX...XHHHHHHHHHHHHTSSHHHHHHHHHHHHHHTSXTTXSSSXXSSXSSXTTTTTT CS
      Nup192  661 akiWrsLDrwifkgsqllpt............vpttsakkq...sgsleekeafesrletysevraflqLlkaLlqpleseseakgklpfPedLGag 742 
                  +++W+ LD+w++ ++                 +    + k     g l  +++++    t  +  af+++l++L+    s++e++ +l+fPe+LG+ 
  EPX73575.1  652 NTLWNYLDNWFITSVLFDIDgglapiplainsK--NVFPKSpsaFGPL--LNNIRRLTATPGMRIAFIRFLTSLI---RSKNELSVTLTFPENLGST 741 
                  **********99876554446****99997542..3333333135555..888888888999999**********...588899************* PP

                  TSSSSSHHHHHHHHH.HHHTGGG.GXXXHHHHHHHHHHHHHHHHHHHHTSXHHHHHHHCCTTTTSSSSTTCHHHHHHHHHSTHHHHHHHHTSHHHHH CS
      Nup192  743 yRkpGiepYldfvldevflkstr.dlkdpaekwelqlsclelletsLasfdpslllfseqaginldslvstsdlatyvklhgfaavlnllfkekvlk 838 
                  yR++G++pY+dfv+++  l+st+ +  ++ e  ++++ cl+++   + + + +ll+     g  + + v++++l  y + h+++ +l+ +f e+v+ 
  EPX73575.1  742 YRASGVKPYVDFVIETLVLSSTQwRTMHDVESLKITEACLQFISAVIDNLNLNLLIYFRLFGNRIKDKVQNNSLYIYLTRHPAIYLLEAVFVENVYA 838 
                  ****************99995552577888999******************************9999****************************** PP

                  HHHHHHXXXHHHHHH.SXTTSHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHH..HHHCXXXXXXXSXTTXSSHHHHHCCXTHHHHHHHHHGGGTXH CS
      Nup192  839 lllkiieegvdeldsyasgkseleelvllaLeilekvLelQetfleellpilk..kkeniyrpknvgsaglssfedillfnLslvlnialYvgldnp 933 
                   l++++e g d++++  s    l+++vl++L il  vL+lQ   ++ ++p ++    +++  + ++++++   + +++++++s++++++l+vg+ ++
  EPX73575.1  839 GLFDLVEFGFDQIED-VSVPPLLVSTVLQSLFILRDVLALQRELFKNVIPYITelGISKHILDLTISRRA---YREVFMTRISSIVHLGLLVGSRHQ 931 
                  ***************.66679*******************************977334555666666664...5566******************** PP

                  HHHHHHHHHHHHHTTXTTG.GTSSXXXXXXSXHHHHHHHHSSXHHHHHHHHHHHHHSXX.XTTTTTSXHHHHHHHHHHHHHHHHHHSSTTSXXHHHH CS
      Nup192  934 eialaslkiLekissspkv.sassasrllkknklltvfesvdeserIkqgfveqLeaeiedeeqeeeeealqiKlaILdlLnsnLsasskeptvahf 1029
                       +++iL  +  s+ + +   +++  +++ l ++  + +es+rI +gf++ +e  ++   +     + +    IL + ++nL++s+   ++a +
  EPX73575.1  932 CFVQPAIEILGFLVDSEGFmN---KGSTDENKLLCSIVRTANESKRIIFGFIRAFEFRSRALLS-----SGNESSFILRFVLNNLKQSKGFFSLALL 1020
                  ****************99933...4455556666689999999*************99987666.....3444578********************* PP

                  HTTXXXB.TBXXXX...TTSTTTTTXSHHHHHHHHHTTXXXXXTTSX......BXHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHT.THHHHHH CS
      Nup192 1030 LLGfdvr.ndlslgneqqsgviasqssllhsllsllesslelisegdksrgskideaparLaekileillkLcrnpltseltLryLretefllrhll 1125
                   LGfd++     +   +++g++ sq sll+sll++      +++ +d+     +  +++  + ++lei+ +Lc++plt e+tL  Lr+  ++l +l+
  EPX73575.1 1021 ILGFDISsT-NAVIVRDEPGYVGSQISLLNSLLNFI-----ELRTQDD-----VVLETPLVMVEALEIVAHLCSSPLTYEATLAVLRDRPHFLVNLV 1106
                  *******54.55545899******************.....5556554.....88899999999***********************9889999*** PP

                  HHXXXXXTTXXBTTBXTTS.....TTSTTSTTHHHHHHHHHHHHHHHHHHHHHTTTTTSSSXHHHHHHHHHHHHTEE.XSS.SS...E..XXXTTTS CS
      Nup192 1126 slppkidentlWngqefdgslssnkeflssesigallsFlnqrslllqylslelhslsqsgstskkkrlvdlLlgsn.tae.ee...engspkildl 1217
                  +++p i+++++   q        n e ls+e ++a++  l++r+ ++ +l +e+h +s+ g++ + k++v  L+gs+  +  ++   +++  kild+
  EPX73575.1 1107 NVEPIISQSSI---Q--------NLESLSTEEVNAFSRCLHARAQVMTMLLTEIHFTSSLGKKKQSKEYVASLIGSTdRLRtSQlsqKSSGFKILDF 1192
                  ***********...3........355568899*******************************************9966543336667789****** PP

                  XXSXXTTSXG.GSXXXXHHHHH....HTTXXXXBXXXXX.XXXBXXHHHHHHHHHHHH.HH...XSSXSHHHHHHH....HHHHHHHHHHHHHHHHH CS
      Nup192 1218 Ldvlnfefke.keeqpqleffdkvnlellLdkceekdadsgnklydisklekllrlek.sslk.qlvqseskagqekeimaEiekileyavklnrqk 1311
                  +d+l +++ +  +e   l     +nl++ ++k        ++  +d++++ kl++l   ++++  + ++e+k+ + ++  +  +++ + +  +n++ 
  EPX73575.1 1193 MDILRIDNRKiASE---LPKVPGFNLSMFVTKFDNGV---NDFQFDTDRVVKLYKLLFdTEASvMEGTNEEKELWYNQKREKLQDLSNRLDLFNARV 1283
                  *******6664444...44555556999999994444...44689**999999999987344456999**********99***************** PP

                  HHHHHHHHHHHHHHHHHHHHHH..HSXXXSHHHHHHHHHHHHHHHHHHHHHTTTXHHHHHHHHHHHHHHHTTXXXXXXXX...XXXXHHHHHHHCCT CS
      Nup192 1312 elreaqlkvLhsWvqLvqvlvs..dgelsseersnfilevlqkilpkindyveediqfaeelaslvsvllfdlyeklrqsikkseeqketgnlsser 1406
                   + ++  ++L+sW  L+ +l++  ++e+++    +fi e+l  +lp  ++y  e+++++     ++ ++++    k+ ++i+ +e  k      +e 
  EPX73575.1 1284 IFLQHVHDCLESWARLTGILIEdcHSEIPEVYFDEFIWELLRLLLPGASNYSLENQNTVSVTTAVI-ETIVPYALKKMNAINPNEYGK--LTYFVEG 1377
                  **********************99999*********************888888888888888888.999999999999998998888..6667799 PP

                  THHHHHHHHHHHHHT-S-HHHHHHHHHHHHHHHHTTT---.HHHHH.........HHHHHHHHHHHTHHHHHHHHHHHTSS-HHHHHHHHHHHHHHH CS
      Nup192 1407 LlqlfktciegIlssestqkLRsdlYvlllnyLqieaset.skanlslkee..slkkeilqiiksygekLieviCnDaitgegvcritalllLdsLv 1500
                     +  ++i+gI + +s +++R++lY +ll  L+  ++ t + ++++ ++e  +  ++ +   ++ ++++++v+ +Da++ +g+c  ++ + L+ L 
  EPX73575.1 1378 VQGIIVNLIKGIQCQSSDESIRENLYGSLLSILTTFQKCTsTLNREDGDKEflNALEKCM-NSSLLSSSFLDVVTKDALYTSGSCWELSVITLNFLH 1473
                  ***********************************5444443333333333222223333.23556899**************************** PP

                  HH.TT---H.HHHHHHHTTHHHHHHHGGGGHHHHHH---------------HHHHHHHHHHHHHHTSHHH CS
      Nup192 1501 elsssnksnfilellvknnyLkllvrslkrtdealqeilkpdpesldalyetvfesklalLirlAqtrkG 1570
                  +l s + s+ + ++  ++n+++ +v++  ++ ++   i+++++e ++ +    +e+  ++Li lAq +  
  EPX73575.1 1474 RL-SPDISTDLYKYYLRRNFIGSFVDAFSKIFSD---IVASGKEIIEVI--SGLEAGQCFLITLAQNKIA 1537
                  **.6889999*******************99999...888888888888..889************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1646 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       648  (0.0361426); expected 358.6 (0.02)
Passed bias filter:                      421  (0.0234815); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.95u 0.32s 00:00:01.27 Elapsed: 00:00:00.47
# Mc/sec: 10542.62
//
Query:       EPX73576.1  [L=301]
Description: DNA-directed RNA polymerase III complex subunit Rpc34 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.1e-98  329.3   0.1    5.9e-97  325.0   0.1    2.0  1  RNA_pol_Rpc34  RNA polymerase Rpc34 subunit
  ------ inclusion threshold ------
      0.019   14.9   0.0        2.3    8.2   0.0    2.6  2  TrmB           Sugar-specific transcriptional regulator TrmB
      0.071   13.5   2.0       0.13   12.6   2.0    1.5  1  EndIII_4Fe-2S  Iron-sulfur binding domain of endonuclease III
      0.089   13.0   0.4       0.16   12.2   0.1    1.6  2  Ribosomal_S25  S25 ribosomal protein


Domain annotation for each model (and alignments):
>> RNA_pol_Rpc34  RNA polymerase Rpc34 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  325.0   0.1  1.3e-100   5.9e-97       1     336 []       1     301 []       1     301 [] 0.95

  Alignments for each domain:
  == domain 1  score: 325.0 bits;  conditional E-value: 1.3e-100
                    ......-HHHHHHHHHHHHHCSSSSSHCCHHHHHHH.STTSHHHHHHHHHHHHHHCTSEECCC.STTSCECEE--CCCHHHHHTSXHHHHHHHHHH CS
  RNA_pol_Rpc34   1 masakaklqelkkrlleelrkaseqklfsqqdLqdd.ipslslklllsavqeLldkkllvllknsndeLvyravsreeAkkktslsedeslVysiI 95 
                    ma++  +l  ++++l+e  +++  +++++qq+L+d    s+s+++l sa++ Ll+k+ll+ l+ + + Lvyrav  eeAk++++++ de++Vy++I
     EPX73576.1   1 MADQLKSLPRTARQLYEFSSTK-IPNALTQQELLDGvGGSVSVNNLSSALNLLLSKRLLEALQ-QGNTLVYRAVPLEEAKTVSTMEGDEQIVYDFI 94 
                    888889999********99999.************97899***********************.******************************** PP

                    HHHXSSXEEHHHHHHTTGXXHHHHHHHHHHHHHTTXXEEEEXSSSSSXEEEESSSTXXXXXXXXXXXXXSTTSSSSTHHHHHHHHHHHHHCHCSXS CS
  RNA_pol_Rpc34  96 eesGneGIwsrtiksklnLhksvvkkcLksLeskkyiksvksvkaptkkiYllanLePseevTGGpwftdgelDveFieeleeiifklvkqkssvs 191
                    +++GneGIw++t++ ++nLh +vv++cLk Lesk+++k +ksvk+pt+kiY+l++L Ps e+TGGpwftd+elDveFie+l+++++++++ ks++ 
     EPX73576.1  95 KNAGNEGIWTKTLTLRTNLHVHVVNRCLKALESKNLVKPIKSVKNPTRKIYMLYDLVPSSELTGGPWFTDQELDVEFIENLKKVVYRFIHAKSFPP 190
                    ***********************************************************************************************9 PP

                    TT..........SSS.SSHHHHHHHSSSSTXXBXSCHHHHHHHCSTTTSSSXSHCCHHHHHHHHCHSSSCEEETTT.XXXEEEETTHHHHHCCTTT CS
  RNA_pol_Rpc34 192 leqitqkkeksgkkaekekkkalplaagyksyptveeiakfineagitkvrLseediqqlvevLvyDgklekvkvsagyrvqratkqnvlrltskr 287
                    ++              ++   +++++++y+++pt+ +i++++++++it+v+Ls  ++ +lv+vL+yDgk+ek + + +y ++r + +         
     EPX73576.1 191 KK--------------NATGPDMIWSPEYNGFPTALQIHTWLRNTNITEVELSLGNVISLVDVLIYDGKVEKRSDGVSYCSVRPSPD--------- 263
                    87..............457899****************************************************9955544444433......... PP

                    TS.XXXXXXXSSSSSTTXXSSXSSSSSXXTSSSSSSSSSSTTSSSSXXX CS
  RNA_pol_Rpc34 288 rkeakvvqpealasglveapcgecpvfdlceeggavspkncvYlkeWle 336
                               +++ ++e+pcg+cpv d+c  g++vsp +c+Yl++Wl+
     EPX73576.1 264 -----------ATNAFTEVPCGTCPVADICAVGSRVSPITCEYLDKWLN 301
                    ...........356689******************************95 PP

>> TrmB  Sugar-specific transcriptional regulator TrmB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0      0.01        46      40      68 .]      46      75 ..      38      75 .. 0.80
   2 ?    8.2   0.0   0.00051       2.3      36      64 ..     115     150 ..     100     154 .. 0.76

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.01
                HHHHHHHHHCTSEEEES.STTTEEEE--HH CS
        TrmB 40 YevLrsLedkGlVerek.grpklYravdpe 68
                 ++L+ L++k l e  + g++ +Yrav++e
  EPX73576.1 46 SSALNLLLSKRLLEALQqGNTLVYRAVPLE 75
                5788889999999987747788*****986 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.00051
                 CHCHHHHHHHHHHCTSEEEESST.......TTEEEE CS
        TrmB  36 rskvYevLrsLedkGlVerekgr.......pklYra 64 
                    v++ L+ Le+k lV+ +k+        ++lY  
  EPX73576.1 115 VHVVNRCLKALESKNLVKPIKSVknptrkiYMLYDL 150
                 55699***************9766888555555555 PP

>> EndIII_4Fe-2S  Iron-sulfur binding domain of endonuclease III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   2.0   2.9e-05      0.13       8      17 .]     273     282 ..     273     282 .. 0.99

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 2.9e-05
  EndIII_4Fe-2S   8 CeaCPLaDlC 17 
                    C+ CP+aD+C
     EPX73576.1 273 CGTCPVADIC 282
                    ********** PP

>> Ribosomal_S25  S25 ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       2.7   1.2e+04      69      83 ..      50      64 ..      45      69 .. 0.54
   2 ?   12.2   0.1   3.5e-05      0.16      57      98 ..     102     145 ..      78     147 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 2.7
  Ribosomal_S25 69 ngslArraLreleek 83
                   n+ l++r+L+ l++ 
     EPX73576.1 50 NLLLSKRLLEALQQG 64
                   444555555555544 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 3.5e-05
  Ribosomal_S25  57 itpsvvserlkingslArraLreleekgliklv..skhraqviY 98 
                    i + ++  r ++++ +  r+L+ le+k+l+k++  +k+   +iY
     EPX73576.1 102 IWTKTLTLRTNLHVHVVNRCLKALESKNLVKPIksVKNPTRKIY 145
                    56678999************************966677777888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (301 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       431  (0.0240393); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.28s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2162.10
//
Query:       EPX73577.1  [L=101]
Description: hypothetical protein SOCG_04973 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       450  (0.025099); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.24s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 778.89
//
Query:       EPX73578.1  [L=519]
Description: fumarate hydratase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   1.1e-111  373.2   0.0   1.5e-111  372.7   0.0    1.2  1  Lyase_1      Lyase
      5e-21   74.9   0.0    1.1e-20   73.8   0.0    1.6  1  FumaraseC_C  Fumarase C C-terminus
  ------ inclusion threshold ------
      0.073   12.9   0.8       0.16   11.8   0.1    1.9  2  NOP19        Nucleolar protein 19


Domain annotation for each model (and alignments):
>> Lyase_1  Lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  372.7   0.0  2.6e-115  1.5e-111       1     312 []      66     397 ..      66     397 .. 0.98

  Alignments for each domain:
  == domain 1  score: 372.7 bits;  conditional E-value: 2.6e-115
                 CEEEEETCHHHHHHHHHHHHHGGGHHHHHC.......HHHHHHHHHHHTTSST...HHHHHHHHHHHHHHHCHCHHCGGHHHBSSSSSHHHHHHHHHHH CS
     Lyase_1   1 grftvkadklmgiftersrenfrlseedik.......alaalkkaaakanvdl...keeaaaiikaldevleegklddqfvlkviqegsgtavnmnlne 89 
                 g ++v+adk++g++t+rs++nfr+++  ++       a+++lk aaa++n+      + a ai++a++ev++ g+l+d+f+l+v+q+gsgt++nmn ne
  EPX73578.1  66 GPVQVPADKYWGAQTQRSLQNFRIGGPGERlplplvqAFGILKFAAASVNKTFgldPKLAGAIEQAAQEVID-GRLNDNFPLVVFQTGSGTQSNMNSNE 163
                 5689*********************99999**********************9*******************.************************** PP

                 HHH....HHTT......HSSGIIIIITTT--HHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTT-EEEEEETTEEEEEEEHHHHHHHHHHH CS
     Lyase_1  90 vig....ellg......ekvepndkvhtgqSsnDqvpTalrlalkkalsekLlpaleqLidalkekakefkdvvkiGrThlqdAtPvtlgqelsayaea 178
                 vi+    ellg      ++v+pnd+v+++qSsnD++pT +++a + +++++Llpa+e L+++lk+k  ef++++kiGrTh qdAtP+ lgqe+s+y+++
  EPX73578.1 164 VIAnraiELLGgtlgskKPVHPNDHVNMSQSSNDTFPTVMHVASVLQIRKHLLPAMELLRNSLKKKQDEFQEIIKIGRTHMQDATPLSLGQEFSGYVTQ 262
                 *****9999999999************************************************************************************ PP

                 HHHHHHHHHHHHHHHTCEETTTTTTTSSTTTSCCTHHHHHHHHHHHHHCST.EESSSHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHHHTSTT.TS CS
     Lyase_1 179 lerdrerlkellkrllvellgggtavgtglnadpefaelvakelakvtglp.vkapnsfeavsdrDavvellgalkllatsLskfaeDlrllssge.ag 275
                 +e  + r+ ++l   l +l++ggtavgtgln+   f+ +va+++++ tg++  +apn+fea++++Da+ve++gal+++a+sL+k+a+D+r l sg+ +g
  EPX73578.1 263 MEYGIARVHNAL-PRLSLLAQGGTAVGTGLNTFSGFDVKVAEKISENTGIEfKTAPNKFEALAAHDAIVEMSGALNTVACSLMKIANDIRQLGSGPrCG 360
                 ************.7788899999**************************************************************************** PP

                 SEEEEGCCTSSC-TTSTTTEBTHHHHHHHHHHHHHHH CS
     Lyase_1 276 lvelslaesepGSSiMPgKvNPvqlElltgvagrvvG 312
                 l+el l+++epGSSiMPgKvNP+q+E+lt+v+++v+G
  EPX73578.1 361 LGELILPANEPGSSIMPGKVNPTQCEALTMVCAQVMG 397
                 ************************************9 PP

>> FumaraseC_C  Fumarase C C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.8   0.0   1.8e-24   1.1e-20       1      53 [.     463     515 ..     463     516 .. 0.98

  Alignments for each domain:
  == domain 1  score: 73.8 bits;  conditional E-value: 1.8e-24
                  GGGGGHHHHHHHHHHHHHHHHHHHT--HHHHHHHTT-.-HHHHHHHT-HHHHH CS
  FumaraseC_C   1 LVTaLnphIGYekAakIAkeAlkegktlreavlelgllteeeldelldpekMt 53 
                  LVTaLn hIGY+++ak+Ak+A+k+++tl+   ++lg+ ++e+++e+++pe M+
   EPX73578.1 463 LVTALNTHIGYDNCAKVAKTAHKNQTTLKKEFVDLGFGSAEQFEEWVRPELMI 515
                  8***************************************************8 PP

>> NOP19  Nucleolar protein 19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1      0.56   3.4e+03      94     108 ..      29      43 ..      25      47 .. 0.74
   2 ?   11.8   0.1   2.8e-05      0.16      46     137 ..     133     231 ..     114     235 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.56
       NOP19  94 kvsslakkkkkkeks 108
                 ++++++k+k++++++
  EPX73578.1  29 TLNTSSKQKRMNSTA 43 
                 678889999988775 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 2.8e-05
       NOP19  46 keeledskkaFfnLpvvqiGsGLsfseeee.esskedihtiGeFiksdkkvsslakkkkkkeks......skrnsiyrvskddtkamvaLkrkmrkeer 137
                 +e ++   ++ f L v q+GsG + +++++   +++ i+ +G  + s+k v         ++++       +  s+ +++k    am  L++ ++k++ 
  EPX73578.1 133 QEVIDGRLNDNFPLVVFQTGSGTQSNMNSNeVIANRAIELLGGTLGSKKPVHPNDHVNMSQSSNdtfptvMHVASVLQIRKHLLPAMELLRNSLKKKQD 231
                 455666778899*************99998678999*************9987665555544445578889999999**************99999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (519 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       546  (0.0304535); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 3874.88
//
Query:       EPX73579.1  [L=488]
Description: 26S proteasome non-ATPase regulatory subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.5e-06   24.9   0.0    1.1e-05   24.1   0.0    1.4  1  Proteasom_PSMB  Proteasome non-ATPase 26S subunit


Domain annotation for each model (and alignments):
>> Proteasom_PSMB  Proteasome non-ATPase 26S subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.0   6.2e-10   1.1e-05      64     236 ..      75     245 ..      19     271 .. 0.80

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 6.2e-10
  Proteasom_PSMB  64 vellklilkalavdelae.dlkvvlleglshanpnvkalvLaeleRiveekegalellkneelllliikalreedlsvaeeairllskllkqeag 157
                     v+ l+++l+ ++ ++l++  +++ l  gl+ +  +v+ ++ + ++R  + k+  +    +e++  li+ +l++e ++v+eea +ll  +++ +a 
      EPX73579.1  75 VKALEKLLEPMSWNDLKHfGIEAYLATGLQNPSAEVQLFCFKLVRR-ANWKDRDI----SENIFELILICLNSESIQVSEEAFQLLLDMSDYHAY 164
                     677899999999998765368999***************9999999.55555533....799********************************* PP

  Proteasom_PSMB 158 leelkskLkallkr..ndivRariYelavelakkSaealsivte..llekllkeldgeDvLvqldalelltelAegkhgleyl 236
                      e++  ++ ++  +  + + ++r   l ++la kS+e ++ v +  ++   ++e    D+ ++l  +++l  + e++    y+
      EPX73579.1 165 FEQILREFTDMDYQilDTTLKVRWLMLFTKLAIKSPEYMDEVVKkgIFAFDIQET--SDIFLRLCYVDVLNLMLETQFSFTYV 245
                     **********9999878899*****************998777657776666654..68888888877777666666666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (488 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       463  (0.0258241); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.46
# Mc/sec: 3212.18
//
Query:       EPX73580.1  [L=163]
Description: riboflavin kinase Fmn1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.7e-34  118.4   0.0      2e-34  118.2   0.0    1.0  1  Flavokinase  Riboflavin kinase


Domain annotation for each model (and alignments):
>> Flavokinase  Riboflavin kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.2   0.0   1.1e-38     2e-34       2     111 .]      21     147 ..      20     147 .. 0.91

  Alignments for each domain:
  == domain 1  score: 118.2 bits;  conditional E-value: 1.1e-38
                  TS-EEEEEEEES-SSCH.TTTT--EEEEE-...S-B-G..TSEEEEEEEE.......EEEEEEEETTTSSE...EEEEETT--S.--TTSEEEEEEEE CS
  Flavokinase   2 grpyslsgkVvkGkkrG.relgfpTaNlel...ekllp..kkGVYavrvk.......gvaniGvrptfknk...vEvhildfse.dlygkelrvellk 82 
                  ++p++++gkVv+G++rG ++lg+pTaN++    ++ll+  ++GVY++++        +v+++G++p++kn+   +Evh+++ ++ d+y++++rv +l+
   EPX73580.1  21 PYPIRFEGKVVHGFGRGsKDLGIPTANVSEdsiQELLKhkDSGVYYGFAMvsqhifpMVMSVGWNPYYKNTvrsAEVHLINRKGlDFYDQQIRVIVLG 118
                  689*************************9755555552458*****************************87778*****87778************* PP

                  EEEE----SSHHHHHHHHHHHHHHHHHHH CS
  Flavokinase  83 flRpekkFdsleaLkaqikkDvekarell 111
                  ++Rpe +++++++L+++i+ D+++a ++l
   EPX73580.1 119 YIRPELNYEGVQKLIEDIQIDIQVALNSL 147
                  ************************98875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       459  (0.025601); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1196.31
//
Query:       EPX73581.1  [L=341]
Description: WRDR85 family WD repeat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    0.00057   20.1   0.0     0.0074   16.6   0.0    2.5  2  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain


Domain annotation for each model (and alignments):
>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0   0.00029       5.2      40      66 ..      79     106 ..      67     114 .. 0.82
   2 !   16.6   0.0   4.1e-07    0.0074       2      87 ..      84     173 ..      83     178 .. 0.77

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.00029
  ANAPC4_WD40  40 evrsLaWkpdg.klLavaysdgevrlld 66 
                   + +++W+p + ++Lava+s g+++++ 
   EPX73581.1  79 AILDFKWSPHDpSILAVAHSTGHISFYR 106
                  577899*9865389**********9875 PP

  == domain 2  score: 16.6 bits;  conditional E-value: 4.1e-07
  ANAPC4_WD40   2 swcptm.DLiAlatedgellvfRlngqrvwtl..eedkedsevr..sLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtcl 87 
                  +w+p+   ++A+a ++g++  +R +++    +    +  ds+v   +L ++ dgk + v+ s+g v  +d+ sg + ++++ ++ +   ++
   EPX73581.1  84 KWSPHDpSILAVAHSTGHISFYRHQFRAELMFlrGIKVADSSVLmlALDFSDDGKDISVSLSNGIVITIDIPSGVIKNTWKEHHYE-AWTV 173
                  6787642699*************99854333334455555555533899*************************999999888764.5555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (341 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       312  (0.017402); expected 358.6 (0.02)
Passed bias filter:                      283  (0.0157845); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 2327.35
//
Query:       EPX73582.1  [L=309]
Description: 60S acidic ribosomal protein Rpp0 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.4e-25   87.4   0.2    1.3e-24   86.3   0.2    1.6  1  Ribosomal_L10  Ribosomal protein L10
    1.1e-20   73.4   0.0    1.7e-20   72.7   0.0    1.3  1  RL10P_insert   Insertion domain in 60S ribosomal protein L10P
    2.9e-15   56.6   5.0    2.9e-15   56.6   5.0    1.7  2  Ribosomal_60s  60s Acidic ribosomal protein


Domain annotation for each model (and alignments):
>> Ribosomal_L10  Ribosomal protein L10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.3   0.2   2.1e-28   1.3e-24       3      96 ..       5     101 ..       3     104 .. 0.93

  Alignments for each domain:
  == domain 1  score: 86.3 bits;  conditional E-value: 2.1e-28
                    CCCHCCCCCCCCCCCTTSSEEEEEE-TTS-HHHHHHCCCHHHHHGCEEEEESCCCCCCCCHCCTSS.S....SCGCCSSSEEEEEESS-TCHHHHC CS
  Ribosomal_L10   3 kekKeelvkelkellkkyksvvvvdyegltvaqlqelRkklrengaelkvvKntlmrrAleetgeeek....lkellkgpvalvftnedpvalakv 94 
                    ke+K++++++l++l++ky sv+vv++++++++q++++Rk+lr++ ael ++Knt++rrA+++   e      l ++++g+v++vftn+d +++ ++
     EPX73582.1   5 KENKTKYFEKLHQLFQKYHSVFVVNIDNVSSQQMHTVRKDLRGS-AELIMGKNTMIRRAMRGIINELPelerLMPNVRGNVGFVFTNGDLKEVRQA 99 
                    89******************************************.*****************999732466799*******************998 PP

                    CC CS
  Ribosomal_L10  95 le 96 
                    + 
     EPX73582.1 100 II 101
                    85 PP

>> RL10P_insert  Insertion domain in 60S ribosomal protein L10P
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.7   0.0   2.9e-24   1.7e-20       1      71 []     109     178 ..     109     178 .. 0.99

  Alignments for each domain:
  == domain 1  score: 72.7 bits;  conditional E-value: 2.9e-24
  RL10P_insert   1 AraGtiAtedviipagplelaPgsiepeLrklglptklkkGkivleedylvckkGetltseqaqlLklLgi 71 
                   Ar+++iA+ dv++pag+++++Pg++ +++++lg+ptk+++G+i++++++++++k +++++++a lL++L+i
    EPX73582.1 109 ARPNAIAPLDVFLPAGNTGMEPGKT-SFFQALGIPTKITRGTIEITNEVHLVEKDTKVGPSEAVLLNMLDI 178
                   9************************.*******************************************98 PP

>> Ribosomal_60s  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1       2.1   1.3e+04      44      49 ..     102     107 ..      89     115 .. 0.42
   2 !   56.6   5.0   4.9e-19   2.9e-15       2      88 .]     230     308 ..     229     308 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 2.1
                    XXXXXX CS
  Ribosomal_60s  44 aklaaa 49 
                    a+++aa
     EPX73582.1 102 ANVVAA 107
                    221122 PP

  == domain 2  score: 56.6 bits;  conditional E-value: 4.9e-19
                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XX--SS--STTT CS
  Ribosomal_60s   2 ptaenikkvlkaagveveaarvkllvkalegkdieellangaaklaaaaaaaaaaaaaaaaaaaaeekkkeeeeeEeedddmGfgLF 88 
                    pt  +  +++ ++++++  +++++++++  +++ + +la+++a+     aaaa+aaa+aa+a+aae+k++e+e   e+d+dmGfgLF
     EPX73582.1 230 PTIVSALHSIVNSYKNLVGVSLATEYTFEGTEQAKAFLADPSAF-----AAAAPAAAPAAEAPAAEQKAEEPE---ESDEDMGFGLF 308
                    666777899********************************988.....667777777777777777776665...7********** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (309 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       723  (0.0403257); expected 358.6 (0.02)
Passed bias filter:                      605  (0.0337442); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2216.39
//
Query:       EPX73583.1  [L=400]
Description: tRNA (guanine-N7-)-methyltransferase subunit Trm82 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-07   31.8   1.8      0.059   14.3   0.7    4.5  5  WD40      WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.32   5.7e+03      16      29 ..      18      31 ..      12      35 .. 0.80
   2 !    8.7   0.0   0.00018       3.3      15      37 ..      71      93 ..      64      94 .. 0.89
   3 ?   -2.3   0.0      0.55   9.8e+03      15      28 ..     115     127 ..     111     130 .. 0.78
   4 !    3.6   0.0    0.0076   1.4e+02       9      36 ..     162     195 ..     153     195 .. 0.77
   5 !   14.3   0.7   3.3e-06     0.059       9      38 .]     210     239 ..     204     239 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.32
                EEEETTSSEEEEEE CS
        WD40 16 lafspdgawlasGs 29
                +++ p++++l+++s
  EPX73583.1 18 ISYLPEKQLLVCCS 31
                56789999999987 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00018
                EEEEETTSSEEEEEETTSEEEEE CS
        WD40 15 slafspdgawlasGsdDgtvriW 37
                 +a+s+d + la+ s+D+ +r+W
  EPX73583.1 71 QVAVSKDESRLAAVSEDKCLRLW 93
                57899******999********* PP

  == domain 3  score: -2.3 bits;  conditional E-value: 0.55
                 EEEEETTSSEEEEE CS
        WD40  15 slafspdgawlasG 28 
                 +++f+++g++++ G
  EPX73583.1 115 DMKFHDSGDLIF-G 127
                 466999999987.6 PP

  == domain 4  score: 3.6 bits;  conditional E-value: 0.0076
                 SSSSE.EEEE.....EETTSSEEEEEETTSEEEE CS
        WD40   9 GHssv.tsla.....fspdgawlasGsdDgtvri 36 
                 GH s+ t l+        d+  ++++++D ++ri
  EPX73583.1 162 GHVSIlTQLCltkdpHKADQEIIVTSDRDEHIRI 195
                 8955448888667777777777999999****98 PP

  == domain 5  score: 14.3 bits;  conditional E-value: 3.3e-06
                 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 GH ++v+ ++  ++++++ sG+ D++v +Wd
  EPX73583.1 210 GHeDFVSRISLYDSSTLI-SGGGDNHVFLWD 239
                 997779999888888887.6755*******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (400 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       494  (0.0275531); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2811.57
//
Query:       EPX73584.1  [L=255]
Description: rRNA processing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.4e-34  115.9   1.2    1.3e-33  115.3   1.2    1.3  1  Fcf1      Fcf1
    6.7e-05   23.2   0.0     0.0001   22.6   0.0    1.3  1  PIN_9     PIN like domain


Domain annotation for each model (and alignments):
>> Fcf1  Fcf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.3   1.2   1.5e-37   1.3e-33       1      99 []      51     151 ..      51     151 .. 0.97

  Alignments for each domain:
  == domain 1  score: 115.3 bits;  conditional E-value: 1.5e-37
                 HHCTS-EEEEEEHHHHHHHHHCT..-HHHHHHHTTSEEE----.SS---HHHHHHHHH-BT.B-TT-EEEE-S-HHHHHHHHTSTT--EEEEE--EEEE CS
        Fcf1   1 ktLqakvkpliTqCviaeleklgkklkealkiaktferlkCnh.kkptsaddClvsvvkkk.knkkryivAtqDkdlrrrlrkipgvPilyikrsvmvl 97 
                 +t+q+++kp+iTqC+i++l++ +++ k+ ++iak+fer++C+h ++++s+ +C++s+++ + knk+ry+vAtq+++lr +lr++pgvP++y+krsv+vl
  EPX73584.1  51 RTVQGDIKPMITQCCIRQLYSRSQEAKQEIQIAKSFERRRCGHiDEAKSPLECMQSCINVNgKNKHRYVVATQNTELRDHLRSVPGVPLIYMKRSVVVL 149
                 5899***************************************99999***********8569************************************ PP

                 -- CS
        Fcf1  98 Ek 99 
                 E+
  EPX73584.1 150 EP 151
                 97 PP

>> PIN_9  PIN like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.0   1.1e-08    0.0001       1     114 [.      28     143 ..      28     145 .. 0.81

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 1.1e-08
       PIN_9   1 vilDtnaLmipvqfgvdifeelerll.gsvelvvpkavleELerlakagkgkertaakvalsL.aerceiveae...eekaDdailelakeldaavlvT 94 
                 v++D+ ++   ++ ++di ++++r + g+ + ++ +  ++ L +     +++ ++++++a+s  ++rc  ++      e     i    k+ +  v++T
  EPX73584.1  28 VLVDSDFISDLTKSKMDITAAIKRTVqGDIKPMITQCCIRQLYSR----SQEAKQEIQIAKSFeRRRCGHIDEAkspLECMQSCINVNGKNKHRYVVAT 122
                 789***********************9999999999998888776....6677889999999945559999988343333555555556677788999* PP

       PIN_9  95 nDreLkkrllek.gipvilLR 114
                 + +eL+++l++  g+p i+++
  EPX73584.1 123 QNTELRDHLRSVpGVPLIYMK 143
                 *********984499999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1271  (0.0708907); expected 358.6 (0.02)
Passed bias filter:                      585  (0.0326287); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 1708.16
//
Query:       EPX73585.1  [L=335]
Description: pyridoxine-pyridoxal-pyridoxamine kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.9e-13   48.5   0.0    9.9e-13   48.0   0.0    1.2  1  Phos_pyr_kin  Phosphomethylpyrimidine kinase
  ------ inclusion threshold ------
      0.039   13.2   0.1       0.12   11.6   0.1    1.8  1  PfkB          pfkB family carbohydrate kinase


Domain annotation for each model (and alignments):
>> Phos_pyr_kin  Phosphomethylpyrimidine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.0   0.0   1.1e-16   9.9e-13      41     209 ..      58     235 ..      38     260 .. 0.78

  Alignments for each domain:
  == domain 1  score: 48.0 bits;  conditional E-value: 1.1e-16
                   EE--HHHHHHHHHHHHH..TS--SEEEE-S--SHHHHHHHHHHH.HH....TTSSEEEE---SSCTSSSBSSHHHHHHHHHHTGGG-SEEE-BHHHH CS
  Phos_pyr_kin  41 hplpaelveaqleavle..dvkvdavKiGmlasaeiievvaekl.kk....ykvpvVlDPVmvaksgselleeeavealkeeLlplatvitPNlpEa 130
                   ++ +++ v++ lea+l+  d+  da+ +G + ++ ++evv + l ++     +v+ + DPVm  ++g++ +ee++++++k+ +l +a +itPN +E+
    EPX73585.1  58 RACEPSEVQELLEALLDknDFVYDAILTGFIPNQGVLEVVSKLLiEYqsrhPHVKWIADPVMG-DQGETYVEEDVLNTYKN-VLSHAFLITPNAFEV 152
                   56778889999999985449999*****************99886432222456899****96.7789999*********8.999************ PP

                   HHHHT---SSHHHHHHHHHHHHH.TT-SEEEEEEGGS-SSSEEEEEEEE..TSSEEEEEEEE---.-S--BTHHHHHHHHHHH CS
  Phos_pyr_kin 131 eaLlgekikteedmkeaakkllk.lgakaVlikGghlegeeavvtdvly..dgeeveeleaerie.tknthGtGCtlssaiaa 209
                   + L+g ++ +++++    k++ + +++ + +i+  +  g++  +  + y  ++++++ +  ++ + +    GtG+ +s    a
    EPX73585.1 153 NLLTGVSVMNKSTALYGLKRIYDlYKVPQAVITSFEDAGDSYSIYCMGYslQEGKIRSFLYSYPSlSGIFTGTGDLFSGLTLA 235
                   ***********************889999999998754433332222224477777666554443126678888888866555 PP

>> PfkB  pfkB family carbohydrate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   1.4e-05      0.12     124     202 ..      70     160 ..      57     253 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 1.4e-05
                 HHHHGCTSEEEEES....EECTTSHHHHHHHHHHHHHHTTEEEEEECESSSHH.........HHHHHHHHHCTESEEEEEHHHHHHHHTSCT CS
        PfkB 124 edlleeadllyisg....llsselpeavleelaeaaknggtfdpnlldplgaq.........fkeallellaladllkpneeElealtgekl 202
                 e+ll ++d++y +     +  +++ e v ++l+e  + +  ++  + dp   +         ++ +++++l++a l++pn+ E   ltg + 
  EPX73585.1  70 EALLDKNDFVYDAIltgfIPNQGVLEVVSKLLIEYQSRHP-HVKWIADPVMGDqgetyveedVLNTYKNVLSHAFLITPNAFEVNLLTGVSV 160
                 5556666666543333455555555555555665555555.344444444443455567777999************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (335 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       624  (0.0348039); expected 358.6 (0.02)
Passed bias filter:                      523  (0.0291706); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2353.76
//
Query:       EPX73586.1  [L=535]
Description: lysine-tRNA ligase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-66  224.5   0.0    2.1e-66  224.2   0.0    1.1  1  tRNA-synt_2      tRNA synthetases class II (D, K and N)
    7.7e-11   41.8   0.0    1.4e-10   41.0   0.0    1.4  1  tRNA_anti-codon  OB-fold nucleic acid binding domain
    3.9e-08   33.1   0.0    0.00048   19.7   0.0    3.0  3  tRNA-synt_2d     tRNA synthetases class II core domain (F)
  ------ inclusion threshold ------
      0.025   14.7   0.0      0.056   13.6   0.0    1.6  1  tRNA_anti_2      OB-fold nucleic acid binding domain
       0.04   14.2   0.0      0.075   13.4   0.0    1.4  1  Mre11_DNA_bind   Mre11 DNA-binding presumed domain


Domain annotation for each model (and alignments):
>> tRNA-synt_2  tRNA synthetases class II (D, K and N)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  224.2   0.0   5.8e-70   2.1e-66       2     312 ..     186     531 ..     185     533 .. 0.87

  Alignments for each domain:
  == domain 1  score: 224.2 bits;  conditional E-value: 5.8e-70
                  CCHHHHTHHHHC.CSHHHHHHHHHHHHHHHHHHHHHHHTT-EE----SEESS--SSSS--EEEEETTT.TEEE-E-S-SHHHHHHHHHCTHSEEEEEE CS
                  xxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2   2 eelrlknryldl.rtekvskvlrlrstvtkavrkyleengfieietPiLsksdteegarlFkvksrekekeffaLtqspqlylellivagidrvfqia 98 
                  +e r+++ry+dl  ++++   l+ r ++++++r+++ +n+f+e+etP+Ls++ +++ ar+F ++  ++ + +  L+ +p+l+l+ l+++g++r+f+++
   EPX73586.1 186 QEKRFQQRYVDLvANPDTLLALKRRFQIIDCIRNFFRKNDFTEVETPLLSHHFGGAMARPFITNDAHR-QPLS-LRCAPELWLKQLVIGGMHRIFELG 281
                  789*********99*************************************************55544.4555.************************ PP

                  EEE--S--BTTB-S-CEEEEEEEEET-SCHHHHHHHHHHHHHHHHHHHHCSCCCCCHTTTTTSEE-SSS.-EEEEHHHHHHHHHTS............ CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxx............ RF
  tRNA-synt_2  99 raFRaEdsrtdrhlaEFtqieaemsfieeedimqvleelikslvkevlessakdiefvirrnskdlkkp.fkrltykeaieklnei............ 183
                  ++FR+E +++++++ EFt++ea+++f++ +  +++++ l+ +++ +v ++s   ++ ++     +l +  f+ l++  ++e+  ++            
   EPX73586.1 282 KNFRNEGLDATHNP-EFTSCEAYCAFTNLKTFIDMTKVLLGEICMNV-HGS---LQLTHLGV--SLDSDsFQTLEFIPSLENSLNQslgvidnsegcr 372
                  **************.********************************.666...33333333..333333**********997766677555555555 PP

                  ...-SS--HHHHHHHHH.............................HS--SEEEEEEEBGGGSTTCBBBSTTS....TTBBSEEEEEETTEEEEEEEE CS
                  ...xxxxxxxxxxxxxx.............................xxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2 184 ...gkdldkaderalvk.............................keknepvfvtdfPaelkpFyarkeedd....kkltesyDllingvElvgGsl 245
                                  +                             +    p+f++++P+ ++p++++++ ++      ++++++l++ + E+++++ 
   EPX73586.1 373 rflL------------DifrqrnikqpktptvshlldklfdhcvleRLTDGPTFIVHHPEIMSPLAKSEKIKYgdteYLVSKRFELYLGKSEICNAYE 458
                  5550............5555555555555555556667777666669999********************99999988999*******999******* PP

                  B--SHHHHHHHHHHCCHH......SSSGGGGHHHHHHHHCT--SEEEEEEEHHHHHHHHCT-SSGGGCSSS-X CS
                  xxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2 246 Riedpeeleeklkskgld......eeaeekfswylealeyGapphgGlglGldRlvmlllgsesIrdviaFPk 312
                  ++++p  ++ek++s+++d      +ea+ ++ ++++aleyG+pp+ G+g+G+dRlvml++g++ I +v++F  
   EPX73586.1 459 EENNPLSQKEKFESQQYDrtelgdQEAPIPDADFVRALEYGLPPTTGWGMGVDRLVMLFTGQRRINEVLPFGS 531
                  ***********************99**********************************************76 PP

>> tRNA_anti-codon  OB-fold nucleic acid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.0   0.0   3.9e-14   1.4e-10       1      73 [.      87     168 ..      87     170 .. 0.97

  Alignments for each domain:
  == domain 1  score: 41.0 bits;  conditional E-value: 3.9e-14
                      EEEEEEEEEEEEEEETTEEEEEEEETTEEEEEEEET..........HHHHHHHTTS-TTSEEEEEEEEEECTTSSEEEEEEEE CS
  tRNA_anti-codon   1 VtvaGrvtsisdrsggkvifidlrDgtgriqvvlfr..........eeatklaenlkeGdvvrvtGrvkrrpggelelkveei 73 
                      +tv+Gr+ +i+  +++k++fid++Dg  ++q+++ +            ++++++ +++Gd++++tG ++++ +gel++++++i
       EPX73586.1  87 YTVCGRIGNIR-YASSKLVFIDINDGLPKLQLTISKrnvtdstneaIPFSNILKAFRRGDYIQCTGFIGKTSKGELSIYATQI 168
                      69********9.*******************************999999999999*************************998 PP

>> tRNA-synt_2d  tRNA synthetases class II core domain (F)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.11     4e+02      21      46 ..     212     237 ..     195     244 .. 0.83
   2 !   19.7   0.0   1.3e-07   0.00048     102     142 ..     275     316 ..     262     333 .. 0.80
   3 !    8.8   0.0   0.00029         1     211     231 ..     503     523 ..     495     529 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.11
                   HHHHHHHHHHHCTTCEESSTTSEEEH CS
  tRNA-synt_2d  21 kvleeikeiflelgfeevegpevese 46 
                   ++++ i+++f++  f+eve p + ++
    EPX73586.1 212 QIIDCIRNFFRKNDFTEVETPLLSHH 237
                   78999**************9988655 PP

  == domain 2  score: 19.7 bits;  conditional E-value: 1.3e-07
                   EEEEEEEEEEBSST-SSSB-SEEEEEEEEEEETT--.HHHHH CS
  tRNA-synt_2d 102 ikiisigrvfRrdavDathlaeFhqveglvvdenvs.ladlk 142
                   ++i+ +g+ fR++ +Dath +eF+++e  ++ +n++ + d++
    EPX73586.1 275 HRIFELGKNFRNEGLDATHNPEFTSCEAYCAFTNLKtFIDMT 316
                   699************************998877763244443 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.00029
                   EEEEEEEHHHHHHHHHT-SSG CS
  tRNA-synt_2d 211 gfafGlGveRlamlkygieDi 231
                     ++G+Gv+Rl ml +g   i
    EPX73586.1 503 TTGWGMGVDRLVMLFTGQRRI 523
                   578***********9987666 PP

>> tRNA_anti_2  OB-fold nucleic acid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.6e-05     0.056      15      94 ..      80     168 ..      65     169 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.6e-05
  tRNA_anti_2  15 eaelkkavwvrGeisnlkr.kasghvYftLkDekakisavifrsraaklk.....ft.....ledGmkVlvkgrlsvYeprGsyqlivedi 94 
                  +++  ++++v G i n+ r ++s+ v++++ D   k++ +i +++++  +     f+     ++ G+ + ++g +   + +G++++++++i
   EPX73586.1  80 DRKHDESYTVCGRIGNI-RyASSKLVFIDINDGLPKLQLTISKRNVTDSTneaipFSnilkaFRRGDYIQCTGFIGK-TSKGELSIYATQI 168
                  55566789*********.53669*********999********88866554555532454557**********9986.6778899988877 PP

>> Mre11_DNA_bind  Mre11 DNA-binding presumed domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   2.1e-05     0.075      84     108 ..     186     210 ..     177     216 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 2.1e-05
                     -HHHHHHCCCTTBS-SSSSEEEE-S CS
  Mre11_DNA_bind  84 npqrfgqrFvgkVANpndvlqfyrk 108
                     + +rf qr+v+ VANp ++l ++r+
      EPX73586.1 186 QEKRFQQRYVDLVANPDTLLALKRR 210
                     468****************998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (535 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       433  (0.0241508); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 4014.70
//
Query:       EPX73587.1  [L=240]
Description: aprataxin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.9e-20   71.1   2.0    1.6e-19   70.4   2.0    1.4  1  DcpS_C    Scavenger mRNA decapping enzyme C-term binding
    4.6e-18   65.8   2.0    1.1e-17   64.5   2.0    1.7  1  HIT       HIT domain
    2.1e-09   37.7   0.0    4.4e-09   36.7   0.0    1.6  1  zf-C2HE   C2HE / C2H2 / C2HC zinc-binding finger
  ------ inclusion threshold ------
      0.038   13.7   0.0      0.056   13.1   0.0    1.3  1  TMEM71    TMEM71 protein family


Domain annotation for each model (and alignments):
>> DcpS_C  Scavenger mRNA decapping enzyme C-term binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.4   2.0   3.7e-23   1.6e-19       7     114 .]      39     168 ..      33     168 .. 0.87

  Alignments for each domain:
  == domain 1  score: 70.4 bits;  conditional E-value: 3.7e-23
                 HHTTSS-B-EEEE-SSEEEEE-SS-SSSEEEEEEESS.---SGGG-.....-TTTTTHHHHH.HHHHHHHHHHTT-T...............-EEEEE- CS
      DcpS_C   7 lakgkepervvyedekfvvlkDikpkaklhllvipkr.dikslrdL.....tkehlpllkem.rekakkvieekyne...............vdaeelr 83 
                 +++ + +++v+y d++fv ++D++pk+k+hll +p++ +++ +++L       + ++ l+ m ++k+ ++i+++  +                  ++++
  EPX73587.1  39 IEHPQAHNNVLYYDDDFVFIRDKYPKSKMHLLLMPRNsSLTLVHPLeilakHRSLIDQLRFMvFNKLSDIIMKEARNslfsdpelsskvpsrTLWDFIK 137
                 5677889******************************999*9**998844444445555544359999***999988***********99998889*** PP

                 -SCCCT--S-S--EEEEE........SS--- CS
      DcpS_C  84 vgvhyqPsvyhlHlHvisldfespglkrkkh 114
                 +g+h+ Ps+++lHlHv++ d+ sp  k++ h
  EPX73587.1 138 LGFHAGPSMNNLHLHVMTRDHVSPSIKNNAH 168
                 *************************999876 PP

>> HIT  HIT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.5   2.0   2.6e-21   1.1e-17       3      97 ..      43     158 ..      41     159 .. 0.90

  Alignments for each domain:
  == domain 1  score: 64.5 bits;  conditional E-value: 2.6e-21
                 CC-CCEEEE-SSEEEEE-SS-SSSSEEEEEESS.TGCSGGGCCHHHHHHHHHHHHHHHHHHHTCT......................TCCCEEEEEEES CS
         HIT   3 eipstvvyeddlvlafldidpkapghlLvipkk.hlselhdlteeelakllsavkkvakalqkkf......................knkglrvvinng 78 
                 ++ ++v+y+dd+++ ++d+ pk+++hlL++p++  l+ +h+l+  +lak++s+++++   + +k+                        ++l  +i+ g
  EPX73587.1  43 QAHNNVLYYDDDFVFIRDKYPKSKMHLLLMPRNsSLTLVHPLE--ILAKHRSLIDQLRFMVFNKLsdiimkearnslfsdpelsskvPSRTLWDFIKLG 139
                 67899****************************99********..88999998888877777777788899999999********99557888899*** PP

                 GGGT-SSSS-EEEEEEC-T CS
         HIT  79 ahagqsvahlHiHviprre 97 
                 +hag+s+++lH+Hv++r++
  EPX73587.1 140 FHAGPSMNNLHLHVMTRDH 158
                 *****************98 PP

>> zf-C2HE  C2HE / C2H2 / C2HC zinc-binding finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.7   0.0   9.9e-13   4.4e-09       1      63 [.     173     226 ..     173     227 .. 0.96

  Alignments for each domain:
  == domain 1  score: 36.7 bits;  conditional E-value: 9.9e-13
     zf-C2HE   1 tteFFvpledlpeelekdgeieslseeqskelilktpLkCtrCganfgnkfpkLKeHLeeefe 63 
                 + +FFv+++   ++l + g+ +         ++ +++ +C rC+++fg++f +LK HL +e++
  EPX73587.1 173 NSPFFVNIDTPVSQLPVRGSLS---------YLFQQDVRCYRCQESFGRQFSRLKGHLSKELD 226
                 689****************999.........*9**************************9976 PP

>> TMEM71  TMEM71 protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   1.2e-05     0.056      49     132 ..     144     231 ..     105     237 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.2e-05
      TMEM71  49 csidpltgsvlvC.rrsPrlltnGyyvltedsflcdedGnitlsPsqtsvlyk.enlvrifrkkrrvrrslssll.dlsas.ksWleg 132
                  s+++l   v++    sP +  n +y+  +  f+++ d  ++  P + s++y  ++ vr +r +  + r +s l  +ls+  + Wl++
  EPX73587.1 144 PSMNNLHLHVMTRdHVSPSIKNNAHYISFNSPFFVNIDTPVSQLPVRGSLSYLfQQDVRCYRCQESFGRQFSRLKgHLSKElDVWLQE 231
                 56777765555431469***********************************73678*****************98888888999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       427  (0.0238162); expected 358.6 (0.02)
Passed bias filter:                      369  (0.0205812); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1712.04
//
Query:       EPX73588.1  [L=333]
Description: DNA-directed RNA polymerase III complex subunit Rpc53 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      5e-27   95.2   0.4      5e-27   95.2   0.4    2.4  3  RNA_pol_Rpc4  RNA polymerase III RPC4


Domain annotation for each model (and alignments):
>> RNA_pol_Rpc4  RNA polymerase III RPC4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.4     0.069   1.2e+03      28      60 ..      19      36 ..       3      63 .. 0.39
   2 ?   -2.6   0.1      0.38   6.7e+03     118     129 ..     161     172 ..     143     184 .. 0.53
   3 !   95.2   0.4   2.8e-31     5e-27       2     149 .]     198     333 .]     197     333 .] 0.77

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.069
  RNA_pol_Rpc4 28 kseaesqsaekakaeeeskaekasgaeaeekks 60
                  ++++ ++               + + e +++++
    EPX73588.1 19 EEKEVDS---------------RVKVEYNTENQ 36
                  1111111...............11111111111 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.38
  RNA_pol_Rpc4 118 qevvvveeedek 129
                   q vvv +ee+e+
    EPX73588.1 161 QAVVVNKEEEEQ 172
                   222222222222 PP

  == domain 3  score: 95.2 bits;  conditional E-value: 2.8e-31
  RNA_pol_Rpc4   2 grlylfQfPpllPslkqkavsaaeddkseaesqsaekakaeeeskaekasgaeaeekkskkksskkkkkkkskalklkslpeGviGkLlvhkSGkve 98 
                   ++++l+QfP+ lP +        + d +   +++a++ k+e++++++  + +e   + ++kk+++ k+  +s + +  ++p+G++G ++vh+SGk+ 
    EPX73588.1 198 DQIVLLQFPDKLPDFL------GQADVDPVWPEEATQVKEEPDAQEKPPQPSE---SGETKKKANYKDGLTSLPVPGFQPPAGQVGVMRVHQSGKTV 285
                   789************9......3333333333333434333333333333333...333444556677888889999999***************** PP

  RNA_pol_Rpc4  99 lrlGgillevspGaqpsFlqevvvveeedekekealvLGkvnkkfvvtPdv 149
                   l++G++ + v++G+++ Flqev++++ e   +k++++LG  +++++v+P++
    EPX73588.1 286 LDMGNVDFIVQSGSDCLFLQEVAALDFE---SKRMWNLGTFQRRMIVSPNF 333
                   ***************************7...799***************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (333 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       953  (0.0531541); expected 358.6 (0.02)
Passed bias filter:                      599  (0.0334096); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.28s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 2215.01
//
Query:       EPX73589.1  [L=330]
Description: CCR4-Not complex CAF1 family ribonulcease subunit Caf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.5e-20   72.9   0.2    6.7e-09   35.4   0.0    2.4  2  CAF1       CAF1 family ribonuclease
  ------ inclusion threshold ------
      0.029   14.3   0.0      0.046   13.7   0.0    1.3  1  RNase_H_2  RNase_H superfamily


Domain annotation for each model (and alignments):
>> CAF1  CAF1 family ribonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.4   0.0   7.5e-13   6.7e-09       1     126 [.      26     143 ..      26     149 .. 0.86
   2 !   35.1   0.2     9e-13   8.1e-09     210     319 .]     165     249 ..     154     249 .. 0.83

  Alignments for each domain:
  == domain 1  score: 35.4 bits;  conditional E-value: 7.5e-13
                 E-GGGHHHHHHHHHHHHHH-SEEEEEEEES-SS----------.-HHHHHHHHHHHTTTB-EEEEEEEEEEEETTTTE..EEEEEEEEEB----SS--- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        CAF1   1 VtrsNfkellpeilkaikeasFvAiDlEftGlsegerkeslad.sleerYeklkqaaesfsilqlGlscfsedkekkekeykvqpynfylfpkeedldr 98 
                 V   N+++ +  i++ +++   +++D+Ef G+    r+   ++ s + +Y++l++++ + +i+q+Gl++  ed +   + ++   +nf    +      
  EPX73589.1  26 VWATNLEQEMTLIMNLVSRYPVISMDTEFPGV--VARPLGIFKsSGDYHYQTLRANVDTLKIIQIGLAMSDEDGNVPPEAFTW-QFNFRFNIQ------ 115
                 66789**************************9..455555555056789*********************8888887777877.567776654...... PP

                 EEEEEHHHHHHHHHTT--HHHHHTT-B- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        CAF1  99 efsvspsslqFLakngfdfnkliseGip 126
                 e ++ p+s++ L k g+df k  + Gi+
  EPX73589.1 116 EDMYAPESIELLTKSGIDFKKHQEAGIE 143
                 779******************9999995 PP

  == domain 2  score: 35.1 bits;  conditional E-value: 9e-13
                 EESSTHHHHHHHHHHHT--.--SSHHHHHHHHHHH-SSEEEHHHHHTSTTTTTT-S--SHHHHHHHTTSTTS--.......--EEE-TTS--------- CS
                 xxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        CAF1 210 VgHNgllDllflyqtfyae.LPesleeFkaklselFPgiiDtKylakneelearleassLeelfeklkkenskskdassseekkesekkkaaseesaHe 307
                 V + + +D+++l++++ +  LP+++eeF + l  +FP+++D Ky++k    +  ++++ L+++ + l +               +         + +H+
  EPX73589.1 165 VTFHSGYDFAYLLKAMTQLsLPSEYEEFYKILCIYFPKTYDIKYIMK----SLLNNSKGLQDIADDL-Q--------------INRI-------GPQHQ 237
                 4555567*********9978**************************2....4567889*********.2..............2222.......346** PP

                 HHHHHHHHHHHH CS
                 xxxxxxxxxxxx RF
        CAF1 308 AGyDafmTGlvf 319
                 AG Da++T  +f
  EPX73589.1 238 AGSDALLTSRIF 249
                 ********9998 PP

>> RNase_H_2  RNase_H superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   5.2e-06     0.046      54     121 ..     157     234 ..     128     257 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 5.2e-06
   RNase_H_2  54 llekkkalvtfngksFDvpflkrlfkkyklde..eef.........rhiDLlkelrkkklesysLksvekelgierree 121
                 +l+++ ++vtf+ +++D+ +l + + +  l++  eef         +++D+ +++++  + s +L++++  l+i+r  +
  EPX73589.1 157 VLQEDITWVTFH-SGYDFAYLLKAMTQLSLPSeyEEFykilciyfpKTYDIKYIMKSLLNNSKGLQDIADDLQINRIGP 234
                 56777789****.999*********99999987744444455555677799999999888777************9433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       409  (0.0228122); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 2312.85
//
Query:       EPX73590.1  [L=502]
Description: notchless-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.4e-61  200.7  28.0    4.7e-10   39.9   0.1    9.3  9  WD40           WD domain, G-beta repeat
    5.5e-21   74.7   4.0     0.0014   18.9   0.0    6.9  7  ANAPC4_WD40    Anaphase-promoting complex subunit 4 WD40 doma
    2.8e-09   37.4   0.5    6.8e-09   36.1   0.1    1.9  2  NLE            NLE (NUC135) domain
    1.4e-08   34.8   0.0     0.0028   17.5   0.0    3.9  4  eIF2A          Eukaryotic translation initiation factor eIF2A
    6.9e-08   31.6  11.1      0.038   12.6   0.0    5.4  6  Nup160         Nucleoporin Nup120/160
    4.6e-06   25.8   3.3     0.0054   15.7   0.0    4.9  5  Ge1_WD40       WD40 region of Ge1, enhancer of mRNA-decapping
     0.0033   16.8   0.0       0.44    9.8   0.0    3.1  4  WD40_like      WD40-like domain
     0.0045   15.4   0.1       0.69    8.1   0.0    2.3  2  Frtz           WD repeat-containing and planar cell polarity 
  ------ inclusion threshold ------
      0.012   14.4   0.3       0.19   10.4   0.2    2.7  2  Nucleoporin_N  Nup133 N terminal like
      0.014   14.0   0.1      0.043   12.3   0.0    1.8  2  Cytochrom_D1   Cytochrome D1 heme domain
      0.016   14.3   0.0      0.029   13.4   0.0    1.3  1  Phage-Gp8      Bacteriophage T4, Gp8
      0.026   14.5   2.7        4.2    7.4   0.1    3.3  3  PD40           WD40-like Beta Propeller Repeat
       0.13   11.6   2.1        3.6    6.8   0.0    3.0  3  Nbas_N         Neuroblastoma-amplified sequence, N terminal


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.1   3.9e-06    0.0054       3      38 .]     126     163 ..     124     163 .. 0.73
   2 !   39.9   0.1   3.4e-13   4.7e-10       2      37 ..     168     204 ..     167     205 .. 0.95
   3 !   19.4   0.0     1e-06    0.0014       8      38 .]     217     255 ..     211     255 .. 0.75
   4 !   30.6   0.5   2.8e-10   3.9e-07       3      38 .]     261     296 ..     259     296 .. 0.84
   5 !   12.6   0.2   0.00014      0.19       1      33 [.     300     332 ..     300     332 .. 0.79
   6 ?    6.1   0.0     0.016        22      17      38 .]     353     374 ..     350     374 .. 0.87
   7 !   25.0   0.1   1.8e-08   2.5e-05       6      38 .]     384     417 ..     379     417 .. 0.86
   8 !   32.2   0.2   9.3e-11   1.3e-07       2      38 .]     422     459 ..     421     459 .. 0.95
   9 !   31.1   0.1   2.1e-10   2.9e-07       7      37 ..     469     500 ..     463     501 .. 0.91

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 3.9e-06
                 EEEEEESS.SS.EEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ss.vtslafspdgaw.lasGsdDgtvriWd 38 
                 c  +  GH +  ++++ fsp+ +  l++Gs D+t r+Wd
  EPX73590.1 126 CAASMNGHdGTiISAQ-FSPSTSArLVTGSGDCTARLWD 163
                 667889**55545555.5555555599**88*******9 PP

  == domain 2  score: 39.9 bits;  conditional E-value: 3.4e-13
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 +++ tl+GH ++v+++a+ pd + +a+Gs+D+t+r+W
  EPX73590.1 168 TPISTLKGHqNWVSCIAWAPDASIIATGSMDNTIRLW 204
                 5789*****999************************* PP

  == domain 3  score: 19.4 bits;  conditional E-value: 1e-06
                 ESS.SSEEEEE......EETTSSE.EEEEETTSEEEEEE CS
        WD40   8 tGH.ssvtsla......fspdgaw.lasGsdDgtvriWd 38 
                 + H +++ +l+       + +g++ lasGs+D+tvr+W+
  EPX73590.1 217 RRHtKPIMALSwqplhlSPESGPYlLASGSKDNTVRVWN 255
                 56888899996555555555666656799*********8 PP

  == domain 4  score: 30.6 bits;  conditional E-value: 2.8e-10
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +++tl+GH  ++t++++    +w+ s+s+D+t+riWd
  EPX73590.1 261 LVYTLSGHtAPITCVKWGGQ-NWIYSASYDKTIRIWD 296
                 7899****888****55433.66*************9 PP

  == domain 5  score: 12.6 bits;  conditional E-value: 0.00014
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgt 33 
                 g+cl++l+GH   v++l+ s ++ +  sG +D+t
  EPX73590.1 300 GKCLHILKGHaARVNHLSLSTEHVL-RSGAYDHT 332
                 79********777****76666666.47888886 PP

  == domain 6  score: 6.1 bits;  conditional E-value: 0.016
                 EEETTSSEEEEEETTSEEEEEE CS
        WD40  17 afspdgawlasGsdDgtvriWd 38 
                 ++ ++g  l+s+sdD  +++Wd
  EPX73590.1 353 CVKQSGERLVSASDDLQLMLWD 374
                 567789999************9 PP

  == domain 7  score: 25.0 bits;  conditional E-value: 1.8e-08
                 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +  GH + v+  +fspdg+ +a++s D +vr+Wd
  EPX73590.1 384 KMHGHqKVVNYASFSPDGRHIATASFDSSVRLWD 417
                 5679944479999***********99*******9 PP

  == domain 8  score: 32.2 bits;  conditional E-value: 9.3e-11
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 + l tl+GH   v+ +a+s d+++l+s+s D t+++Wd
  EPX73590.1 422 KFLATLRGHvAAVYQCAWSTDSRLLVSSSQDTTLKVWD 459
                 7799*****999*************************9 PP

  == domain 9  score: 31.1 bits;  conditional E-value: 2.1e-10
                 EESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   7 ltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 l GH + v ++++spdg+ +asG+ D+ vriW
  EPX73590.1 469 LPGHlDQVFAVDWSPDGQRVASGGADKAVRIW 500
                 78**999************************* PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.1     0.002       2.7      33      90 ..     129     186 ..     114     186 .. 0.81
   2 !   18.9   0.0     1e-06    0.0014      34      90 ..     173     229 ..     158     231 .. 0.86
   3 !   16.2   0.1   7.1e-06    0.0098       9      87 ..     241     316 ..     241     321 .. 0.78
   4 ?    0.2   0.0      0.67   9.3e+02      37      77 ..     345     386 ..     337     393 .. 0.73
   5 !   15.2   0.0   1.4e-05     0.019      32      77 ..     385     428 ..     376     434 .. 0.86
   6 !   12.5   0.1   9.9e-05      0.14      40      89 ..     433     481 ..     428     482 .. 0.90
   7 !    7.2   0.0    0.0044       6.1      40      65 ..     475     500 ..     470     502 .] 0.89

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.002
  ANAPC4_WD40  33 eedkedsevrsLaWkpdgk.lLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  + +++d+++ s +++p+ +  L+ +  d + rl d  +++ +++l+ +++  v+c+ W+
   EPX73590.1 129 SMNGHDGTIISAQFSPSTSaRLVTGSGDCTARLWDCDTQTPISTLKGHQN-WVSCIAWA 186
                  556788888888888875427999************************99.6******5 PP

  == domain 2  score: 18.9 bits;  conditional E-value: 1e-06
  ANAPC4_WD40  34 edkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                   +++++ v+++aW pd +++a +  d+++rl + ++g  +      ++k ++ l+W+
   EPX73590.1 173 LKGHQNWVSCIAWAPDASIIATGSMDNTIRLWEPKKGAPLGDALRRHTKPIMALSWQ 229
                  4678999*******************************999888888889*****97 PP

  == domain 3  score: 16.2 bits;  conditional E-value: 7.1e-06
  ANAPC4_WD40   9 LiAlatedgellvfRlngqr.vwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtcl 87 
                  L+A +++d+ ++v  ++ +  v+tl  +++   +++++W  ++  +  a  d ++r+ da++gk++h l+ ++  +v+ l
   EPX73590.1 241 LLASGSKDNTVRVWNTKLRTlVYTL--SGHTAPITCVKWGGQN-WIYSASYDKTIRIWDAKDGKCLHILKGHAA-RVNHL 316
                  6777888888888877765416666..8999********8875.6677788999*************9988877.46655 PP

  == domain 4  score: 0.2 bits;  conditional E-value: 0.67
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlld.aesgkvvhsls 77 
                  + +e  +L+ k++g+ L+ a +d ++ l d  +s+k v +++
   EPX73590.1 345 KAKERYELCVKQSGERLVSASDDLQLMLWDpFKSTKAVAKMH 386
                  4555568999**********9999999988345566666655 PP

  == domain 5  score: 15.2 bits;  conditional E-value: 1.4e-05
  ANAPC4_WD40  32 leedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhsls 77 
                  +  +++++ v+  +++pdg+ +a a  d++vrl da++gk + +l+
   EPX73590.1 385 M--HGHQKVVNYASFSPDGRHIATASFDSSVRLWDAKTGKFLATLR 428
                  4..6788889999***************************998875 PP

  == domain 6  score: 12.5 bits;  conditional E-value: 9.9e-05
  ANAPC4_WD40  40 evrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                   v + aW+ d +lL+ + +d+++++ d+ ++k+   l+ + ++ v  ++W
   EPX73590.1 433 AVYQCAWSTDSRLLVSSSQDTTLKVWDVRTKKLKCDLPGHLDQ-VFAVDW 481
                  677899***************************9999988885.999998 PP

  == domain 7  score: 7.2 bits;  conditional E-value: 0.0044
  ANAPC4_WD40  40 evrsLaWkpdgklLavaysdgevrll 65 
                  +v ++ W+pdg+  a + +d +vr+ 
   EPX73590.1 475 QVFAVDWSPDGQRVASGGADKAVRIW 500
                  68899******************995 PP

>> NLE  NLE (NUC135) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1         5   6.9e+03      15      25 ..      16      26 ..       9      28 .. 0.60
   2 !   36.1   0.1   4.9e-12   6.8e-09       1      63 [.      31      94 ..      31      96 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 5
         NLE 15 avpgtplsvPa 25
                + + tp+++P 
  EPX73590.1 16 EQNPTPFEIPE 26
                23488898886 PP

  == domain 2  score: 36.1 bits;  conditional E-value: 4.9e-12
         NLE  1 vqvrFvtkdedeslavpgtplsvPasltrkqLselvnkLlk.eekpvpFdFlid...gel.lrtsLee 63
                v ++F+++d++ +     ++l vP++++  qL+ l+n+Ll+  e+pvp++F ++   + + + ++L++
  EPX73590.1 31 VNIQFRASDDSHE----VPSLLVPGNSSARQLDILLNQLLGsTEDPVPYTFALKqgeDAVeIPDNLYT 94
                78******75544....59**********************75578******9977666667777765 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0    0.0028       3.9      36     127 ..     112     201 ..      99     214 .. 0.63
   2 ?    4.1   0.0     0.028        38      59     158 ..     220     323 ..     214     329 .. 0.74
   3 !   17.5   0.0   2.1e-06    0.0028      93     169 ..     382     457 ..     365     476 .. 0.78
   4 ?    1.6   0.0      0.16   2.2e+02     127     159 ..     455     489 ..     452     501 .. 0.62

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0028
                 EEEEEEEESSSTT--EEECCEE.SSS.EEEEEE-TTSS-EEEEESSSSCEEEEEECSCE.EEEEEEEES--...EEEE-TTSSEEEEE-TTSSS-EE CS
       eIF2A  36 ygetelyliklkkkksevvelk.kegpihdvaWspkskefaviyGkmpakvslfdlkvk.viskleeqkrN...tiffspkgklvllaGfgnlaGel 127
                 y+ ++++++  + +  +  +++ ++g i+ ++ sp+ +   ++ G  + ++ l+d + + +is+l+  ++N   +i + p   +++++ + n+   +
  EPX73590.1 112 YTPQAVFRV--RAITRCAASMNgHDGTIISAQFSPSTSA-RLVTGSGDCTARLWDCDTQtPISTLK-GHQNwvsCIAWAPDASIIATGSMDNT---I 201
                 666666666..3344444444425677888888886554.55678888888888887440444444.33332226788888888888877776...4 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.028
                 SS.EEEEEE.....-TTSS-EEEEESSSSCEEEEEECS.CEEEEEE..EEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-TT--EE CS
       eIF2A  59 egpihdvaW.....spkskefaviyGkmpakvslfdlk.vkviskl..eeqkrNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakaeaanatlv 149
                 + pi +++W     sp+s  +++  G  +++v ++++k   ++++l  ++++  ++++  + + +  a +  +   + iwd k+ k+++ ++   a + 
  EPX73590.1 220 TKPIMALSWqplhlSPESGPYLLASGSKDNTVRVWNTKlRTLVYTLsgHTAPITCVKWGGQ-NWIYSASYDKT---IRIWDAKDGKCLHILKGHAARVN 314
                 4578888884444456889999***************953344444115667788888765.68999999998...99999999999988887777776 PP

                 EE-TTSSEE CS
       eIF2A 150 ewspdgryv 158
                   s + ++v
  EPX73590.1 315 HLSLSTEHV 323
                 666666666 PP

  == domain 3  score: 17.5 bits;  conditional E-value: 2.1e-06
                 EEEEEEEEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-TT--..EEEE-TTSSEEEEEE-TTT-SS CS
       eIF2A  93 kviskleeqkrNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakaeaanat..lvewspdgryvlTattaprlrv 169
                  ++++ +++  N   fsp g+ +++a f +    + +wd k+ k +a+++   a   ++ ws+d+r+++ ++    l+v
  EPX73590.1 382 VAKMHGHQKVVNYASFSPDGRHIATASFDSS---VRLWDAKTGKFLATLRGHVAAvyQCAWSTDSRLLVSSSQDTTLKV 457
                 33444456678*****************986...************9998665542369*********98876544444 PP

  == domain 4  score: 1.6 bits;  conditional E-value: 0.16
                 EEEEETT.TTEEEEEEE-.TT--EEEE-TTSSEEE CS
       eIF2A 127 leiwdvk.kkkkiakaea.anatlvewspdgryvl 159
                 l++wdv  kk k     +  +   v+wspdg+ v+
  EPX73590.1 455 LKVWDVRtKKLKCDLPGHlDQVFAVDWSPDGQRVA 489
                 66777774333333333304555789999998775 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.11   1.5e+02     229     255 ..     146     172 ..     128     177 .. 0.81
   2 ?   -1.4   0.0      0.48   6.7e+02     228     246 ..     185     205 ..     176     219 .. 0.81
   3 ?    3.3   0.1     0.019        26     232     255 ..     241     264 ..     212     270 .. 0.76
   4 !   12.6   0.0   2.8e-05     0.038     224     254 ..     273     304 ..     265     324 .. 0.89
   5 !    7.6   0.0   0.00093       1.3     229     255 ..     400     426 ..     373     431 .. 0.78
   6 !    9.2   0.7   0.00031      0.43     228     252 ..     440     465 ..     429     485 .. 0.82

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.11
                 TTTEEEEEETT-EEEEEETTTTEEEEE CS
      Nup160 229 gqtylfalsrdgkLrvWnlltgkclat 255
                 +++ l++ s d + r+W+ +t+++++t
  EPX73590.1 146 TSARLVTGSGDCTARLWDCDTQTPIST 172
                 556778888999***********9998 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.48
                 ...TTTEEEEEETT-EEEEEE CS
      Nup160 228 i..gqtylfalsrdgkLrvWn 246
                    + +++++ s d+++r+W 
  EPX73590.1 185 WapDASIIATGSMDNTIRLWE 205
                 4568899*************5 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.019
                 EEEEEETT-EEEEEETTTTEEEEE CS
      Nup160 232 ylfalsrdgkLrvWnlltgkclat 255
                 +l++ s d+++rvWn++  ++++t
  EPX73590.1 241 LLASGSKDNTVRVWNTKLRTLVYT 264
                 6777799********998777776 PP

  == domain 4  score: 12.6 bits;  conditional E-value: 2.8e-05
                 ......TTTEEEEEETT-EEEEEETTTTEEEE CS
      Nup160 224 avvei.gqtylfalsrdgkLrvWnlltgkcla 254
                  +v+  gq+ ++++s d+++r+W+ ++gkcl 
  EPX73590.1 273 TCVKWgGQNWIYSASYDKTIRIWDAKDGKCLH 304
                 477778************************86 PP

  == domain 5  score: 7.6 bits;  conditional E-value: 0.00093
                 TTTEEEEEETT-EEEEEETTTTEEEEE CS
      Nup160 229 gqtylfalsrdgkLrvWnlltgkclat 255
                 +  +++++s d  +r+W+ +tgk lat
  EPX73590.1 400 DGRHIATASFDSSVRLWDAKTGKFLAT 426
                 8889*******************9998 PP

  == domain 6  score: 9.2 bits;  conditional E-value: 0.00031
                 ..TTTEEEEEETT-EEEEEETTTTEE CS
      Nup160 228 i.gqtylfalsrdgkLrvWnlltgkc 252
                 + ++ +l++ s+d +L+vW+++t+k+
  EPX73590.1 440 StDSRLLVSSSQDTTLKVWDVRTKKL 465
                 249999*****************985 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.89   1.2e+03     181     214 ..     127     162 ..     115     169 .. 0.68
   2 ?    2.8   0.0     0.033        46     185     214 ..     174     204 ..     161     208 .. 0.84
   3 ?   -0.2   0.1      0.27   3.7e+02     266     288 ..     289     311 ..     276     325 .. 0.60
   4 !   15.7   0.0   3.9e-06    0.0054     179     215 ..     380     417 ..     371     421 .. 0.83
   5 ?    2.1   0.0     0.057        78     185     219 ..     428     463 ..     417     490 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.89
    Ge1_WD40 181 llkieehs.liveaafspdGta.latasedGevkff 214
                    ++ h  +i++a fsp   a l t s d + +++
  EPX73590.1 127 AASMNGHDgTIISAQFSPSTSArLVTGSGDCTARLW 162
                 445555644888888888765547777777777776 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.033
    Ge1_WD40 185 eehs.liveaafspdGtalatasedGevkff 214
                 + h   +++ a++pd   +at s+d +++++
  EPX73590.1 174 KGHQnWVSCIAWAPDASIIATGSMDNTIRLW 204
                 55543789999******************98 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.27
    Ge1_WD40 266 nselklWscelWtClqtikfaps 288
                 ++ +++W ++  +Cl  +k ++ 
  EPX73590.1 289 DKTIRIWDAKDGKCLHILKGHAA 311
                 45555555555555555544333 PP

  == domain 4  score: 15.7 bits;  conditional E-value: 3.9e-06
    Ge1_WD40 179 egllkieehs.liveaafspdGtalatasedGevkffq 215
                 +++ k++ h   +  a+fspdG  +atas d  v+++ 
  EPX73590.1 380 KAVAKMHGHQkVVNYASFSPDGRHIATASFDSSVRLWD 417
                 567788888735667********************996 PP

  == domain 5  score: 2.1 bits;  conditional E-value: 0.057
    Ge1_WD40 185 eeh.sliveaafspdGtalatasedGevkffqvyle 219
                 + h + + + a+s+d   l  +s+d ++k + v  +
  EPX73590.1 428 RGHvAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRTK 463
                 555247899999999999999999999999998765 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0         1   1.4e+03      14      53 ..     149     188 ..     139     205 .. 0.71
   2 !    9.8   0.0   0.00032      0.44     209     295 ..     242     328 ..     238     332 .. 0.91
   3 ?   -1.9   0.0       1.2   1.6e+03       3      32 ..     434     463 ..     396     467 .. 0.66
   4 ?    2.8   0.0     0.043        60       2      27 ..     475     500 ..     474     502 .] 0.91

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 1
   WD40_like  14 lilyGgkddkctvlkleslesvsivesfedSvifvklldd 53 
                  ++ G+ d ++++ + ++++ +s +++ ++ v  +    d
  EPX73590.1 149 RLVTGSGDCTARLWDCDTQTPISTLKGHQNWVSCIAWAPD 188
                 4677999999999999999999998888777665555544 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00032
   WD40_like 209 livGgsfkyllliNiklnvntfklrlevegiskikkisefvvafsTlcgkvgigDiRdketfkllesgvGviydmkfenntiyvgGe 295
                 l +G + + + + N+kl +  ++l+ ++  i+ +k   ++ ++ + ++ ++ i D +d++ +++l+++   +  + + ++ ++  G+
  EPX73590.1 242 LASGSKDNTVRVWNTKLRTLVYTLSGHTAPITCVKWGGQNWIYSASYDKTIRIWDAKDGKCLHILKGHAARVNHLSLSTEHVLRSGA 328
                 45788889999*******************************************************999999999888888877776 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 1.2
   WD40_like   3 iYsidiskkgslilyGgkddkctvlklesl 32 
                 +Y    s ++ l++  ++d +++v +++++
  EPX73590.1 434 VYQCAWSTDSRLLVSSSQDTTLKVWDVRTK 463
                 566666666666666666666666666665 PP

  == domain 4  score: 2.8 bits;  conditional E-value: 0.043
   WD40_like   2 eiYsidiskkgslilyGgkddkctvl 27 
                 +++++d s++g+ ++ Gg d+ +++ 
  EPX73590.1 475 QVFAVDWSPDGQRVASGGADKAVRIW 500
                 699*****************999986 PP

>> Frtz  WD repeat-containing and planar cell polarity effector protein Fritz
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.8   0.0     0.005       6.9     261     324 ..     136     202 ..     118     206 .. 0.79
   2 !    8.1   0.0    0.0005      0.69     261     329 ..     390     461 ..     352     470 .. 0.83

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.005
        Frtz 261 qvislafnpd.edkLllGceDssviLydeerk..itklvkaevvPsliswhpdsaillvasergelq 324
                  +is  f+p+   +L+ G+ D +  L+d +++  i  l   +   s i+w pd +i+  +s    ++
  EPX73590.1 136 TIISAQFSPStSARLVTGSGDCTARLWDCDTQtpISTLKGHQNWVSCIAWAPDASIIATGSMDNTIR 202
                 68888898862579*************99887224566667778899**********9998877766 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.0005
        Frtz 261 qvis.lafnpdedkLllGceDssviLydeerkitklv.kaevvP.sliswhpdsaillvasergelqifDla 329
                 +v+   +f+pd   +   + Dssv L+d++++  + + + +v    +++w +ds +l+ +s+ + l+++D+ 
  EPX73590.1 390 KVVNyASFSPDGRHIATASFDSSVRLWDAKTGKFLATlRGHVAAvYQCAWSTDSRLLVSSSQDTTLKVWDVR 461
                 44441568999999999************998666554666654268**********9999*********85 PP

>> Nucleoporin_N  Nup133 N terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.2   0.00014      0.19     126     296 ..     168     361 ..     166     457 .. 0.56
   2 ?    1.7   0.0     0.062        85     211     238 ..     441     468 ..     403     480 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00014
                    EE--EETT.TTEEEEEEETTTC-EEEEETTSSEEEEEEC-SSS-CEEEEEEEEE-SSSS-.........--SSS--G................... CS
  Nucleoporin_N 126 tdlsvssdgeivtqvinseptgriflagstgrlyeltyrdssgwpslkckkicltkggls.sll.....silpgvls................... 196
                    t++s++++ ++  ++i+  p+  i+++gs ++ ++l   +++   ++ ++ +  + + ls   l     s      +                   
     EPX73590.1 168 TPISTLKGHQNWVSCIAWAPDASIIATGSMDNTIRLWEPKKGAPLGDALRRHTKPIMALSwQPLhlspeS------Gpyllasgskdntvrvwntk 257
                    5666666666666677777777777777777666666666666666677766666666662222222220......13333334445665555556 PP

                    .......----GG-EEEEEEECCTCEEEEEETTSEEEEEEEETTCE.E-EEEEEEEHHHHHHHH.HHSCHTTTCGCTTT-EEEEEEES-TTTSSCE CS
  Nucleoporin_N 197 .......gasereeivqlridssrrilytlsskgvirvydlsasng.esslksdidirqilleaitesliasaplaskslkildispvsaeessll 284
                            +    +i++++ + + +++y++s +++ir++d   +++  + lk+++   ++l+  +te++ +s    + ++k+ ++   ++e+++  
     EPX73590.1 258 lrtlvytLSGHTAPITCVKWGGQ-NWIYSASYDKTIRIWDAK-DGKcLHILKGHAARVNHLSL-STEHVLRSGAYDHTDFKPKNFL-EEREKAKER 349
                    66666665556677888888876.****************88.77777777777777777774.4788888878888888877763.344446666 PP

                    EEEEEECSSSEE CS
  Nucleoporin_N 285 hlvaitsngvrl 296
                      +++ ++g+rl
     EPX73590.1 350 YELCVKQSGERL 361
                    666666666665 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.062
                    CCTCEEEEEETTSEEEEEEEETTCEE-E CS
  Nucleoporin_N 211 ssrrilytlsskgvirvydlsasngess 238
                      +r+l++ s++ +++v+d+ ++  +++
     EPX73590.1 441 TDSRLLVSSSQDTTLKVWDVRTKKLKCD 468
                    4459****************96544555 PP

>> Cytochrom_D1  Cytochrome D1 heme domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0      0.82   1.1e+03     326     352 ..     278     304 ..     236     317 .. 0.60
   2 ?   12.3   0.0   3.1e-05     0.043      14     116 ..     367     470 ..     361     490 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.82
                   SSEEEEEEE--SSEEEEEETTTTEEEE CS
  Cytochrom_D1 326 GdevwlSvwdgkdalvvyDdktlklkk 352
                   G + w+     ++ + ++D+k  k ++
    EPX73590.1 278 GGQNWIYSASYDKTIRIWDAKDGKCLH 304
                   445555555555566666666555555 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 3.1e-05
                   GTEEEEEET.TT-SEEEEEE-STTEEEEEE-TT.SSEEEEEETTSEEEEEESSSSSEEEEEE-SSEEE.EEEE--TTSEEEEEEEETTEEEEEETTT CS
  Cytochrom_D1  14 agkvalldg.dskeilavletgyalHisrvfasdgRyvyvigRDgkvtliDLwakeivaevkiGlnar.svavSqddryvivgnYlPgqlvildaet 108
                   + ++ l d  +s++ +a+++++  +     f++dgR++ +++ D+ v l D  + + +a+++  + a  + a S+d r+++ ++ +  +l++ d +t
    EPX73590.1 367 DLQLMLWDPfKSTKAVAKMHGHQKVVNYASFSPDGRHIATASFDSSVRLWDAKTGKFLATLRGHVAAVyQCAWSTDSRLLVSSS-QDTTLKVWDVRT 462
                   555555564245677899999999999999*******************************98877753789999999877655.678999999999 PP

                   --EEEEEE CS
  Cytochrom_D1 109 Lelvkvis 116
                    +l  +++
    EPX73590.1 463 KKLKCDLP 470
                   88876666 PP

>> Phage-Gp8  Bacteriophage T4, Gp8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   2.1e-05     0.029     244     301 ..      30      87 ..      17      99 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 2.1e-05
                 --EEEEEEEEEGGGSCTTSSTTHS-EEEEEEEES-BB--SSTTS--EB--SSEE-GGG CS
   Phage-Gp8 244 avtlrfkakldsvdfielalpgnkgyrqislvtnpllvkeegadsdvkaekdrydpee 301
                  v+++f+a  ds + + l++pgn   rq+ ++ n ll   e   + + a k+  d  e
  EPX73590.1  30 LVNIQFRASDDSHEVPSLLVPGNSSARQLDILLNQLLGSTEDPVPYTFALKQGEDAVE 87 
                 5789********************************9999888888877777666655 PP

>> PD40  WD40-like Beta Propeller Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1         2   2.7e+03      13      19 ..     182     188 ..     178     193 .. 0.82
   2 ?    7.4   0.1    0.0031       4.2      14      24 ..     395     405 ..     393     416 .. 0.83
   3 ?    5.6   0.0     0.012        16      16      24 ..     481     489 ..     477     489 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 2
                 EEEE-TT CS
        PD40  13 aPsfSPD 19 
                 ++++ PD
  EPX73590.1 182 CIAWAPD 188
                 89****9 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0031
                 EEE-TTSSEEE CS
        PD40  14 PsfSPDGkrla 24 
                  sfSPDG+ +a
  EPX73590.1 395 ASFSPDGRHIA 405
                 69******998 PP

  == domain 3  score: 5.6 bits;  conditional E-value: 0.012
                 E-TTSSEEE CS
        PD40  16 fSPDGkrla 24 
                 +SPDG+r a
  EPX73590.1 481 WSPDGQRVA 489
                 ******975 PP

>> Nbas_N  Neuroblastoma-amplified sequence, N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0         2   2.8e+03      48      70 ..     182     204 ..     174     206 .. 0.79
   2 ?    6.8   0.0    0.0026       3.6     217     260 ..     377     420 ..     349     430 .. 0.78
   3 ?    2.1   0.1     0.072        99      48      76 ..     436     464 ..     429     473 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 2
      Nbas_N  48 rvawshdctllayaestgtvrvf 70 
                  +aw+ d++++a      t+r++
  EPX73590.1 182 CIAWAPDASIIATGSMDNTIRLW 204
                 58999999999999999999986 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0026
      Nbas_N 217 lslklysrkaeekdgvfkmslspdgtllavihfsgklsiwdips 260
                  s k  ++    +  v   s+spdg  +a+  f  ++ +wd  +
  EPX73590.1 377 KSTKAVAKMHGHQKVVNYASFSPDGRHIATASFDSSVRLWDAKT 420
                 5667777888888999999*********************9765 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.072
      Nbas_N  48 rvawshdctllayaestgtvrvfdlvgse 76 
                 + aws d  ll  +    t++v+d+   +
  EPX73590.1 436 QCAWSTDSRLLVSSSQDTTLKVWDVRTKK 464
                 57999999999999999999999976555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (502 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       443  (0.0247086); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.65u 0.30s 00:00:00.95 Elapsed: 00:00:00.47
# Mc/sec: 3233.28
//
Query:       EPX73591.1  [L=880]
Description: F-box protein Pof6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-74  250.2   2.6      2e-73  248.1   2.6    1.8  1  Sec10       Exocyst complex component Sec10
    7.5e-06   25.7   1.0    2.2e-05   24.3   0.4    2.1  2  F-box-like  F-box-like
    4.7e-05   23.2   1.0    0.00014   21.7   1.0    1.9  1  F-box       F-box domain


Domain annotation for each model (and alignments):
>> Sec10  Exocyst complex component Sec10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  248.1   2.6   3.3e-77     2e-73      45     710 ..     185     869 ..     179     870 .. 0.87

  Alignments for each domain:
  == domain 1  score: 248.1 bits;  conditional E-value: 3.3e-77
       Sec10  45 LiefykeflssgetsklellfkkskdpekklkaAqiarkLlaiskeldeleka.entrekiekyaerlEkelLkeFdkayrkedfermkeiAkvLqefn 142
                 L+++y ++  + + + + + f +++   +++++A++++ Ll++ ++  +   + + ++++i ++a  +E+++L+e   +  +++ e  +++ +vL++f+
  EPX73591.1 185 LAPMYRNLAYASN-TLDPIAFSSFE---TPEEQAVVLKLLLRFGNSK-PYGWFdSSMQNAILDMAVLFEQACLDELALGIDSRNLELVSQFSHVLHDFS 278
                 6666666666655.44444545555...55****************9.766662467889*************************************** PP

       Sec10 143 ggasvvqlfvnqhdffi.dkdkldeangiesseiwekladpdeapskveeslqalfseiretvkeeaeiikrVFpnpekVmqtFlqrvfaqviqqrlea 240
                 +    vql++ +h     +  ++d  +         +++  +e +++    l++++++  +    e++  ++ Fp pe V       ++ ++ +++++ 
  EPX73591.1 279 DPNVYVQLYISKHRDYLqSYFQFDPYSL------F-TVNADNERSQIQWGILENVINDTIRLLTSEYAFTSASFPVPELVEIPYAREIVGNSFKNYVTS 370
                 ***********99888812223333333......2.2333455567777889*********************************************** PP

       Sec10 241 lLdkassisqlayLraLhslysstlkLvkdLkeylsteeidgssalsalLdqsveelFvpylegdsYlerEkksLeelyaellskFt.tlheqsasaks 338
                 +++   + + + yL  ++ ly      +k L ++            + +L   v  +F++ +  d Y+  E ++++   ++ +++++ ++ e++ +++s
  EPX73591.1 371 IVEHIGDEEVDLYLIFISGLYRL----SKRLFDI-----------PNGFL--IVDTIFQSQI--DIYISQELHNFKIVAQSVVDQWDlSIREKEGATES 450
                 *********************75....5566666...........44455..6889******..***********************999********* PP

       Sec10 339 lk......nkvkkklatsfkasls.....asklaassktkqinraasstlskskkraelketaats.......................akaaknedel 403
                 +       n  k++++ +fk++++      s  ++++++++i+ra + +++++  +    ++ + s                       a+aa  +++l
  EPX73591.1 451 FFfrnvgqNTAKNNFLETFKNVMLlpvslFSFPSENNEQANIQRAVQISNEPDAYD--GLDNLDPSrfvpsnvyvsqdqlsqlpttelaAQAAVLDSKL 547
                 99********************9999977666677777777777777777777777..6666666667777777777777888888899999******* PP

       Sec10 404 eeedsllslevaesllkwaaeslgRaveLss.....psevpkaveallelLlsalgkeYvetaLd.aal....aaltaqeiaektevpdlsflevvrsv 492
                 e++   +sle+a+++++  + sl+R   +        +++++  + l++ Ll++lg+ ++  ++d a++      +++   ++++e p ++fle+++++
  EPX73591.1 548 EGISNMFSLELALKIVHLCKISLARSKIFLGisssqDEDIQALQKDLFVQLLRQLGQGHLRHGFDrAIEhlslLDPKKDFTNNTAE-PIVKFLELINVG 645
                 ***************************99877666677777778889******************998899877777777666666.7777******** PP

       Sec10 493 dliisllqvyiktillpllsdspdirremvkeknsflsrlEekvnaglqktidvvvgeveylls.kqkknDFrpknddla..merqpTeaCkeivefLs 588
                 d+i+++++ +++++++ +   ++d+ ++++ ek++f++ l+e+++ gl k+idv++++v+ ll  k+  n F p++  l+  m ++p+ a+k+i +fL 
  EPX73591.1 646 DMIQQMMDTFYNEEMSSIC-VRDDMFDPAIAEKKKFEQLLDERAALGLHKGIDVIIEHVDFLLEsKTPINYFSPQSIGLTntM-VEPSAAAKSITQFLR 742
                 ****************998.6777888*************************************9***********9999865.8************** PP

       Sec10 589 svhsalkeslsgsnlesflteiGlrlhklLleHlkkftvsseGGlmltkDlneYqdavksfkipelsekFelLrelgnlfiVqpevlkslvregal... 684
                 ++++ l++s++ + l+ f+ eiG+rl++ L +++k+ ++ +eGGlml +Dln Y ++v s+k+++l+ +F++L+e++ lfi++ ++++++ +  ++   
  EPX73591.1 743 THMKLLVGSTDHEILDLFYKEIGMRLFNSLTRYIKQRKFTVEGGLMLLSDLNLYNEFVVSLKQRALLPYFKALKEIAHLFIIDGKNAEEIGKLATDnsr 841
                 **********************************************************************************88887777666666666 PP

       Sec10 685 ..akldrelireyiqrReDykkekldne 710
                   +++  e+++e+i  R D+ ++k +++
  EPX73591.1 842 fsTAFHTEEVYEFIHCRIDWLSIKYQVD 869
                 99********************999886 PP

>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.3   0.4   3.6e-09   2.2e-05       8      42 ..      37      70 ..      36      75 .. 0.87
   2 ?   -3.0   0.0       1.2     7e+03      13      27 ..     528     542 ..     526     542 .. 0.82

  Alignments for each domain:
  == domain 1  score: 24.3 bits;  conditional E-value: 3.6e-09
  F-box-like  8 iLlqIFsyLppsdLlrlalVCrrWrrvaldtplLW 42
                i l+IFs + + dL+++ lVC++++++++++  ++
  EPX73591.1 37 IYLRIFSLVGTVDLCNCHLVCKKFYELCRSN-TIY 70
                6799***87888****************988.666 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.2
  F-box-like  13 FsyLppsdLlrlalV 27 
                 +s+Lp+++L++ a+V
  EPX73591.1 528 LSQLPTTELAAQAAV 542
                 799999999986665 PP

>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   1.0   2.3e-08   0.00014      11      46 ..      38      73 ..      32      75 .. 0.88

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 2.3e-08
                HHHHHHTS-HHHHHHHCTT-HHHHHHHTTHHHHHHH CS
       F-box 11 lrhILerLplsdllalrrVSkgwrilidsdrlwcks 46
                 + I++ ++++dl+++ +V+k+++ l++s  ++ k+
  EPX73591.1 38 YLRIFSLVGTVDLCNCHLVCKKFYELCRSNTIYIKK 73
                578*************************99888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (880 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       418  (0.0233142); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.71u 0.29s 00:00:01.00 Elapsed: 00:00:00.46
# Mc/sec: 5728.13
//
Query:       EPX73592.1  [L=1102]
Description: shuttle craft like transcriptional regulator [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.4e-14   51.2   0.0    1.8e-13   50.3   0.0    1.4  1  R3H             R3H domain
    2.3e-07   30.7 197.1     0.0002   21.3  11.9   12.9 13  zf-NF-X1        NF-X1 type zinc finger
  ------ inclusion threshold ------
      0.062   11.7   4.0      0.095   11.1   4.0    1.2  1  WDCP            WD repeat and coiled-coil-containing protein 
        4.7    7.2   7.5         15    5.6   7.5    1.8  1  Neur_chan_memb  Neurotransmitter-gated ion-channel transmembr


Domain annotation for each model (and alignments):
>> R3H  R3H domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.3   0.0   3.9e-17   1.8e-13       5      59 ..     859     913 ..     855     914 .. 0.95

  Alignments for each domain:
  == domain 1  score: 50.3 bits;  conditional E-value: 3.9e-17
                 HHHHHHHHHHH-S--EEE-----SHHHHHHHHHHHHSSEEEEEE--SS-SEEEEE CS
         R3H   5 rvekklaefvkdtgrslefppmssyeRriiHelaeaygleseSvGeepkRrvvvt 59 
                  +e  l +  ++++ s++fppm +++R +iH la+ yg eseS + epkR+v+v+
  EPX73592.1 859 DIESALCDTCENDKPSVSFPPMQREQRWFIHALAKLYGAESESFDFEPKRNVIVY 913
                 6899999999999****************************************98 PP

>> zf-NF-X1  NF-X1 type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   1.9       3.8   1.7e+04      15      18 ..     262     265 ..     261     266 .. 0.82
   2 ?   -0.7   0.7      0.35   1.6e+03       4      10 ..     295     301 ..     291     302 .. 0.92
   3 !    8.5  21.3   0.00047       2.1       2      19 .]     302     326 ..     297     326 .. 0.82
   4 !   21.3  11.9   4.5e-08    0.0002       1      18 [.     367     384 ..     367     385 .. 0.98
   5 !   14.1   6.0     8e-06     0.036       1      12 [.     439     450 ..     439     450 .. 0.97
   6 !   12.8  16.7     2e-05     0.092       1      19 []     504     521 ..     504     521 .. 0.97
   7 ?   -2.9   0.6       1.8   7.9e+03       5      10 ..     549     554 ..     549     554 .. 0.92
   8 !    9.7   8.0   0.00019      0.85       1      13 [.     560     572 ..     560     573 .. 0.97
   9 ?   -2.5   1.0       1.3   5.7e+03       4      10 ..     602     608 ..     601     608 .. 0.89
  10 !   19.1  14.2   2.3e-07     0.001       1      18 [.     614     631 ..     614     632 .. 0.98
  11 ?   -8.6   9.2         4   1.8e+04       6      18 ..     680     690 ..     671     691 .. 0.51
  12 !   18.1  11.6   4.5e-07     0.002       1      19 []     727     747 ..     727     747 .. 0.95
  13 !    4.4   9.8     0.009        40       1      16 [.     750     772 ..     750     778 .. 0.73

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 3.8
    zf-NF-X1  15 CppC 18 
                 Cp+C
  EPX73592.1 262 CPSC 265
                 **** PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.35
    zf-NF-X1   4 HkCeklC 10 
                 H C ++C
  EPX73592.1 295 HSCGEPC 301
                 9999999 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.00047
    zf-NF-X1   2 G.......rHkCeklCHeGpCppCp 19 
                 G        H C  lCH+GpCppC+
  EPX73592.1 302 GrtrgqdcVHPCPLLCHPGPCPPCT 326
                 455556668***************5 PP

  == domain 4  score: 21.3 bits;  conditional E-value: 4.5e-08
    zf-NF-X1   1 CGrHkCeklCHeGpCppC 18 
                 CG+H+C++ CH+G C+ C
  EPX73592.1 367 CGKHTCKQRCHSGLCGAC 384
                 ****************** PP

  == domain 5  score: 14.1 bits;  conditional E-value: 8e-06
    zf-NF-X1   1 CGrHkCeklCHe 12 
                 CG+H+C+k+CH+
  EPX73592.1 439 CGIHRCSKVCHP 450
                 ***********7 PP

  == domain 6  score: 12.8 bits;  conditional E-value: 2e-05
    zf-NF-X1   1 CGrHkCeklCHeGpCppCp 19 
                 CG H+C++ CH GpC++C+
  EPX73592.1 504 CG-HQCKQNCHAGPCGSCQ 521
                 **.***************5 PP

  == domain 7  score: -2.9 bits;  conditional E-value: 1.8
    zf-NF-X1   5 kCeklC 10 
                 +Ce+ C
  EPX73592.1 549 TCERFC 554
                 8***99 PP

  == domain 8  score: 9.7 bits;  conditional E-value: 0.00019
    zf-NF-X1   1 CGrHkCeklCHeG 13 
                 CGrH C+++C++G
  EPX73592.1 560 CGRHECNRKCCSG 572
                 ***********99 PP

  == domain 9  score: -2.5 bits;  conditional E-value: 1.3
    zf-NF-X1   4 HkCeklC 10 
                 H C ++C
  EPX73592.1 602 HICLRPC 608
                 99****9 PP

  == domain 10  score: 19.1 bits;  conditional E-value: 2.3e-07
    zf-NF-X1   1 CGrHkCeklCHeGpCppC 18 
                 CG+H C+  CH GpCp C
  EPX73592.1 614 CGNHFCQHMCHRGPCPRC 631
                 ****************** PP

  == domain 11  score: -8.6 bits;  conditional E-value: 4
    zf-NF-X1   6 CeklCH..eGpCppC 18 
                 C    H  + pCp C
  EPX73592.1 680 C----HppSEPCPFC 690
                 4....4333456666 PP

  == domain 12  score: 18.1 bits;  conditional E-value: 4.5e-07
    zf-NF-X1   1 CGrHkCeklCH.eGpCp.pCp 19 
                 CG H+Cek CH eG+C+ +C+
  EPX73592.1 727 CGVHRCEKSCHrEGECEsVCR 747
                 ****************87996 PP

  == domain 13  score: 4.4 bits;  conditional E-value: 0.009
    zf-NF-X1   1 CG......rHkCeklCH.eGpCp 16 
                 CG       H+Ce +CH e pC+
  EPX73592.1 750 CGarrlycEHTCELPCHsEIPCD 772
                 666666668********777774 PP

>> WDCP  WD repeat and coiled-coil-containing protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   4.0   2.1e-05     0.095     484     633 ..     107     256 ..      55     263 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 2.1e-05
        WDCP 484 tsiqseksgrkLieeiksleqsplssvvdlseka.sses.svaletldaepvnrsaalasasstsdessrpespkvekkknlekekeaeqlskelerls 580
                 ++ +++++++k  ++ ks+e+ +l+++vd +  + s +  s + ++ d e+  ++a  +++++ ++ ++  +  k +k++  +k ke   lsk l++ s
  EPX73592.1 107 KNRNRNRNRKKQTNN-KSQEKASLPKKVDSDSAKrSGDIaSSKKNSRDREKNLNNANSEKQNEVEKPKEELKASKGKKREGPRKPKESIDLSK-LDMTS 203
                 344444555555433.4344444444444333333555403444555666666666677777777777777888888999999*****99986.9**** PP

        WDCP 581 ekltevqqsLseltdllqngkksspvYplsqdppyvhityqkslsegsvvekr 633
                 + + e+++ L e + ++   + s+pv+ +s   +  h+ +  + +++s++++ 
  EPX73592.1 204 RMIFEIKKMLYECSVCTDIVRPSTPVWSCSTCFHAFHLKCTRKWMKNSIEQRN 256
                 *****************99999*********************9999988874 PP

>> Neur_chan_memb  Neurotransmitter-gated ion-channel transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   7.5    0.0032        15      85     228 ..       7     209 ..       2     218 .. 0.49

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0032
                     -S-S---HHHHHHHTTHHHHHHC--------------...................................................------- CS
  Neur_chan_memb  85 sprthtmpawvrkvfldklprllfmkrpsevkdnekkl..................................................ssgasse 129
                     sp+ ht+++  rk+  +  +    +   +++ ++ +++                                                  +s  +++
      EPX73592.1   7 SPKAHTVKKGSRKFPRKNRNSSTQLASSKQNGPDTEHTnttsaaadnvglekgsstvslsadapsfvpgvglvkepasenpsietngpPSNVERA 101
                     66666666666666665555555444444444443333566777777777777777777777777777777766666655555555552222223 PP

                     -------------------------------SS---TTGGG--...........-----TTTTTHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
  Neur_chan_memb 130 aeelilskskseskkaklseeqgsekastckckckegeeaspstqlsk......eelspelkkavegvkyiadhlraededksv...kedwkyva 215
                     +++   +++++  +k++ +++++++ + ++k ++++ +++++ ++ +k      ++l+++ ++  ++v+  +++l+a + +k++   k +  +  
      EPX73592.1 102 EPNKNKNRNRNRNRKKQTNNKSQEKASLPKKVDSDSAKRSGDIASSKKnsrdreKNLNNANSEKQNEVEKPKEELKASKGKKREgprKPKESIDL 196
                     33333333333333333333333333333333333333333333222255567744444444444444444444444433333211144445667 PP

                     HHHHHHHHHHHHH CS
  Neur_chan_memb 216 mviDriflwifii 228
                     +++D  +++if i
      EPX73592.1 197 SKLDMTSRMIFEI 209
                     8899999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1102 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1716  (0.0957109); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        73  (0.00407162); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.94u 0.31s 00:00:01.25 Elapsed: 00:00:00.49
# Mc/sec: 6723.63
//
Query:       EPX73593.1  [L=453]
Description: membrane transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-53  182.1  27.9    8.8e-49  166.3  24.2    2.0  2  MFS_1     Major Facilitator Superfamily
  ------ inclusion threshold ------
      0.056   11.8   7.5      0.014   13.8   1.8    2.3  3  MFS_3     Transmembrane secretion effector
       0.19   10.0  20.6       0.62    8.3   8.4    3.8  4  OATP      Organic Anion Transporter Polypeptide (OATP) family


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.3  24.2   1.5e-52   8.8e-49       1     329 [.      21     371 ..      21     381 .. 0.84
   2 !   17.6   0.1   2.3e-07    0.0014     121     177 ..     390     447 ..     388     453 .] 0.82

  Alignments for each domain:
  == domain 1  score: 166.3 bits;  conditional E-value: 1.5e-52
       MFS_1   1 lllaaflsalarsilgpalplalaedlgispse....igllltlyalgaavaslplGrlsdrfGrrr.vlllglllfalglllll.fasslwlllvlrv 93 
                 +++a+f   + +++++p+lp  l +  g+ p      i++ll++ya++ + as p+G+l+d+f  r+  +l+gll++ ++ + ll +++++++l+++r+
  EPX73593.1  21 IAIALFTDLFLYGVITPILPFSLVDRVGVPPERvqtvISTLLSVYAVANITASSPIGYLADKFLTRKmPMLIGLLFLTSA-TGLLtIGTNVPMLIIARI 118
                 5899************************9988855556669999******************988888************.44442469999******* PP

       MFS_1  94 lqGlgagalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpeepperkrkspkeee.... 188
                 lqGl a++++++g+al++d++ +e+ g+ +g + +++slG i++p++gg++++s g+ a+f ++ i++++ +vl   +l+ ep+e k+  p + e    
  EPX73593.1 119 LQGLSAAVVWTVGLALLVDVVGPEHVGSTMGGIFGFISLGEIIAPVFGGIVYESMGYYASFGMCFIILFIDIVL--RVLMIEPREAKKLLPDDPEsqpi 215
                 ***********************************************************************998..99988888888888888866777 PP

       MFS_1 189 ..........kgtgpaplvp.............awkallkdpvlwillialllfffgfsglltllplylqevlglsglllaglllallalvgailalla 264
                           +        +             ++k++ +++ +   ++++++++  f+++ +++pl lq+ +g++  l+ gl++++l+   ++ + +a
  EPX73593.1 216 lrprddpltsN--------SvssnpimkifclpIYKLISHRQLIG-PFFTSFVNSSLFASFDATVPLELQKIFGFN-SLQCGLMFGVLSTPYFFCGAWA 304
                 55555545543........04455555588887888888888665.99999999999999****************.7********************* PP

       MFS_1 265 grlsdrlgrrrrlllallllllaalglallavtssavllll..vlvliGfglgfvfpsllalasdla 329
                 g+++dr g+r++ + a+++l  ++l+l++   +s+  ++++  +l+l G+ l+f++++ +++ s+++
  EPX73593.1 305 GAMVDRKGSRTIGTYAYAVLGSTLLLLCVPRSYSTFNVYMFgiFLALNGVVLSFTSSPGFVQSSRYV 371
                 ******8885555555555555555555555555555555555666699999999999999988887 PP

  == domain 2  score: 17.6 bits;  conditional E-value: 2.3e-07
       MFS_1 121 raigllsagfslGailgpllggllasslgWravfyilaivsllafv.lfllllpeepp 177
                 + ++ +++ +slG+  gp+l+g+l + +g+ a+   + ++++ a +  ++++  ++++
  EPX73593.1 390 QLFSAYNIVYSLGMFSGPVLAGFLRDRFGFVASTTSMSVLCFSASLvAWYCFSDRDET 447
                 57899***************************************87354444444444 PP

>> MFS_3  Transmembrane secretion effector
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   1.8   2.4e-06     0.014      64     197 ..      75     205 ..      58     214 .. 0.80
   2 ?   -0.1   0.1     0.039   2.3e+02      55     115 ..     294     354 ..     282     374 .. 0.69
   3 ?   -1.5   0.0       0.1   6.1e+02     154     185 ..     405     437 ..     388     450 .. 0.67

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 2.4e-06
       MFS_3  64 laGalaDnfdrRkv.llavqlllalvsvlltvlaalgllspwlllaltlligiGaalndPaWqAsvgelvkrrdvpaAvaLnsvginiaRsvGPAlgGv 161
                 + G laD+f  Rk+ +l++ l+l +++ llt+ +     ++ +l++  +l g+ aa+      A + ++v  ++v + +      i +   + P  gG+
  EPX73593.1  75 PIGYLADKFLTRKMpMLIGLLFLTSATGLLTIGT-----NVPMLIIARILQGLSAAVVWTVGLALLVDVVGPEHVGSTMGGIFGFISLGEIIAPVFGGI 168
                 6799****99888758888888888877777754.....56778899999***************************99887777899999******** PP

       MFS_3 162 lvaavGaalafavnalsyl.alivallrwkrevrkss 197
                 +  ++G  ++f++  +  +  +++ +l ++++  k+ 
  EPX73593.1 169 VYESMGYYASFGMCFIILFiDIVLRVLMIEPREAKKL 205
                 ***********99766544145555555555555555 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.039
       MFS_3  55 tLPifllsilaGalaDnfdrRkvllavqlllalvsvlltvlaalgllspwlllaltlligi 115
                 + P f+    aGa+ D    R +   ++++l ++ +ll v   +  +++++  ++  l g+
  EPX73593.1 294 STPYFFCGAWAGAMVDRKGSRTIGTYAYAVLGSTLLLLCVPRSYSTFNVYMFGIFLALNGV 354
                 5699999999999999999998765555555444444455555666666665555555544 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 0.1
       MFS_3 154 vGPAlgGvlvaavGaal.afavnalsylaliva 185
                  GP l+G l   +G ++ + ++ +l++ a +va
  EPX73593.1 405 SGPVLAGFLRDRFGFVAsTTSMSVLCFSASLVA 437
                 479999999999996541566777777776665 PP

>> OATP  Organic Anion Transporter Polypeptide (OATP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.1    0.0018        11      39      82 ..      59     105 ..      54     110 .. 0.85
   2 ?    8.3   8.4    0.0001      0.62     133     379 ..     111     332 ..     105     341 .. 0.71
   3 ?   -2.4   0.1      0.17     1e+03     459     491 ..     341     373 ..     323     375 .. 0.86
   4 ?   -2.9   0.3      0.25   1.5e+03     341     377 ..     400     436 ..     391     441 .. 0.67

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.0018
                 xxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxx RF
        OATP  39 gliassneignillilfvsYfggr...ghrPrwigigallmalgsll 82 
                   ++s++ ++ni ++  ++Y++++   ++ P +ig+  l+ a g l+
  EPX73593.1  59 STLLSVYAVANITASSPIGYLADKfltRKMPMLIGLLFLTSATGLLT 105
                 57899999999999999999999987788899999999999998876 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.0001
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        OATP 133 llfflaqlllGiGatpiytlGisYidDnvkkknsplylgilyalrilGpalGfllGslllklyvdidseisltpkdprWvgaWWlgflilgvllllaai 231
                  ++++a +l+G+ a++++t+G++ + D v +++    +g ++ +  lG +++ ++G+++ +    +                ++  f ++ ++l++  +
  EPX73593.1 111 PMLIIARILQGLSAAVVWTVGLALLVDVVGPEHVGSTMGGIFGFISLGEIIAPVFGGIVYE---SM---------------GYYASFGMCFIILFIDIV 191
                 4899*****************************************************8766...22...............234444444444444333 PP

                 x..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        OATP 232 p..lffFPkelpkkkeerakkkseeesaekkeekkkkeksksseeeelkslkdfpkalkrllknpifllvilssvfeillvaGfitFlpkylEtqFsls 328
                 +  l++ P+e +  k   +  +s++      + +++  +s+s +    + +k f   + +l++++ ++   ++s ++++l+a f + +p  l++ F+ +
  EPX73593.1 192 LrvLMIEPREAK--KLLPDDPESQPIL----RPRDDPLTSNSVS--SNPIMKIFCLPIYKLISHRQLIGPFFTSFVNSSLFASFDATVPLELQKIFGFN 282
                 311444566643..3444443333322....2222222222222..45778889999999999999999999999999999999999999999999999 PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        OATP 329 aseAnlltGvvvipgaalGillgGllvkklklsakklaklvlvvsllslll 379
                 + +  l++Gv++ p + +G  +g ++  ++  ++ ++ +++++ s+l ll+
  EPX73593.1 283 SLQCGLMFGVLSTPYFFCGAWAGAMV-DRKGSRTIGTYAYAVLGSTLLLLC 332
                 99999999999999999998776555.555555666666666666666655 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 0.17
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        OATP 459 klllflillflvsflgalgrvpallvilRcVkk 491
                 ++++f i+l+l  +++++++ p+++   R V++
  EPX73593.1 341 NVYMFGIFLALNGVVLSFTSSPGFVQSSRYVAE 373
                 578999999999999999999999998898876 PP

  == domain 4  score: -2.9 bits;  conditional E-value: 0.25
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        OATP 341 ipgaalGillgGllvkklklsakklaklvlvvsllsl 377
                  +g+  G +l+G+l  ++ + a+++ + vl++s   +
  EPX73593.1 400 SLGMFSGPVLAGFLRDRFGFVASTTSMSVLCFSASLV 436
                 4567777788888888887777776666666655444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (453 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       436  (0.0243181); expected 358.6 (0.02)
Passed bias filter:                      187  (0.01043); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 3346.03
//
Query:       EPX73594.1  [L=598]
Description: beta-glucosidase Adg3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-76  255.8  10.8      8e-76  254.7  10.8    1.5  1  SUN       Beta-glucosidase (SUN family)


Domain annotation for each model (and alignments):
>> SUN  Beta-glucosidase (SUN family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  254.7  10.8   4.5e-80     8e-76       3     245 .]      43     294 ..      41     294 .. 0.95

  Alignments for each domain:
  == domain 1  score: 254.7 bits;  conditional E-value: 4.5e-80
         SUN   3 kikCsefpsdeglvavdalgl.gGwagiqdvkgesqeCkegsyCsyaCppGylktqw.psa..qgatgssvGGLyCnkdGklektnkdskklCekgagk 97 
                  ++C  fp  e++vav++++  +Gwa +++     q C++gs+C+yaC+pGy++ qw p+a  +++++s++GGLyC++dG+  k++ d +++C++g+g+
  EPX73594.1  43 AVHCP-FPYAEKMVAVTPKEGnAGWAISPN-----QYCTSGSWCPYACEPGYVMGQWsPQAtsYSYPESMHGGLYCDHDGNAVKPFGD-RDYCYPGVGN 134
                 57899.***********98877********.....89********************998889*************************.********** PP

         SUN  98 vkvknklsksvavCrTdyPGtEamlipteveagssaelavpdedtyykwkgkktsaqYYvNkaGvsvedaCvWgseskpvGNwaplvlGagkdedgkty 196
                 v + +k+++ v++C+T++PG+Eamlipt+++a+s++ lavpd+++   w   +t+a+YY+N++Gvs++++C+Wg+++kp+GNwap+v+Ga++de++ ty
  EPX73594.1 135 VFAIDKTGEGVSFCQTVLPGNEAMLIPTWISADSEQVLAVPDASY---WV--STAAHYYINPPGVSTNEGCIWGTSEKPYGNWAPYVAGANMDENNITY 228
                 *********************************************...*9..*********************************************** PP

         SUN 197 lsifqNp.......tskeklnfnvkieaeegdsvsgkCkye..........sgklskgggadgCtv 245
                 ++++ Np       +s+ k++f++k+e+e + + +++C ++          +g+ ++ g+a +C+v
  EPX73594.1 229 VKLGANPiylddpyWSTIKPSFGLKLECEGDTCSGLPCYIDprekgvqgcpDGSPNGAGNACFCVV 294
                 **************9**************************9888888886666665577888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (598 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       933  (0.0520386); expected 358.6 (0.02)
Passed bias filter:                      277  (0.0154498); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.29s 00:00:00.88 Elapsed: 00:00:00.44
# Mc/sec: 4065.96
//
Query:       EPX73595.1  [L=270]
Description: 40S ribosomal protein S0-A [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.7e-18   66.7   0.6    1.5e-13   50.4   0.1    2.3  2  Ribosomal_S2  Ribosomal protein S2
    4.2e-07   31.2  14.2    8.9e-07   30.2  14.2    1.6  1  40S_SA_C      40S ribosomal protein SA C-terminus


Domain annotation for each model (and alignments):
>> Ribosomal_S2  Ribosomal protein S2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   1.2e-06     0.011      38      98 ..      35      94 ..      21      98 .. 0.88
   2 !   50.4   0.1   1.7e-17   1.5e-13     145     212 ..      96     163 ..      93     165 .. 0.94

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 1.2e-06
  Ribosomal_S2 38 tlaalrraykvvkevaakggkilfvgtkkqakeavkeaakrangyyvnerWlgGtLTNfkt 98
                  t ++l  a++++  ++++   +  v+t+   ++av + a+ +++  +  r+++G +TN+ t
    EPX73595.1 35 TWEKLVLAARIIA-TVENPADVCVVSTRAYGHRAVLKFAAHTGATAIAGRFTPGNFTNYIT 94
                  6677777777776.78999***************************************865 PP

  == domain 2  score: 50.4 bits;  conditional E-value: 1.7e-17
  Ribosomal_S2 145 mkklPdlvvvldpkkekiavkEakklgipviaivDtnvdpdlvdypIpaNddsirsiklilgvladai 212
                     + P l++v+dp+ +  a++Ea+ ++ipvia+ Dt++  + +d +Ip N++  +si l   +la+ +
    EPX73595.1  96 TYREPRLIIVTDPRADAQAIREASFVNIPVIALADTDSCLNHIDVAIPTNNKGRKSIGLAWYLLAREV 163
                   5678*******************************************************999999876 PP

>> 40S_SA_C  40S ribosomal protein SA C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2  14.2     1e-10   8.9e-07       1      86 [.     183     269 ..     183     270 .] 0.64

  Alignments for each domain:
  == domain 1  score: 30.2 bits;  conditional E-value: 1e-10
    40S_SA_C   1 fFYRdPEeiekeeqaaaekalvkkeeqeewtapveftepevadWaeegvavpsvpaaaaaa...aaevkaaedwsaqpa.tedWsaapta 86 
                 +FYRdPEe+e+ee a++ +a +++e  + +++ ++++e  v+d a++ +  psv  aa+a    + +  ++++w+++ +   dW+a++++
  EPX73595.1 183 YFYRDPEEVEREEEAKKIAA-AEAEA-GAVAEAAAAAEFDVTDAAQS-AVDPSVLDAATAGqvaENTWDDSANWNTTGTaPSDWAATTQT 269
                 9************9766655.55544.45554444455567777744.445555555544434356677788899998769999964443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (270 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       572  (0.0319036); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1975.81
//
Query:       EPX73596.1  [L=2293]
Description: HisK/Mak3 protein kinase Mak3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.5e-17   61.5   0.0    3.6e-16   59.3   0.0    2.3  2  Response_reg  Response regulator receiver domain
    1.7e-14   53.6   0.1    6.8e-14   51.7   0.1    2.2  1  HisKA         His Kinase A (phospho-acceptor) domain
    3.4e-10   40.4   0.0    6.8e-10   39.4   0.0    1.5  1  GAF_2         GAF domain
    3.1e-08   34.2   0.0    3.3e-07   30.8   0.0    2.7  2  AAA_16        AAA ATPase domain
    3.9e-08   33.0   0.2    1.4e-07   31.2   0.2    1.9  1  Pkinase       Protein kinase domain
    4.1e-07   30.2   0.0    9.6e-07   29.0   0.0    1.6  1  PAS_3         PAS fold
    4.6e-05   22.8   0.0    0.00013   21.3   0.0    1.7  1  Pkinase_Tyr   Protein tyrosine kinase
    8.8e-05   23.1   0.0     0.0002   22.0   0.0    1.7  1  GAF           GAF domain
    0.00015   22.1   0.0     0.0003   21.1   0.0    1.5  1  GAF_3         GAF domain
    0.00028   21.4   0.0    0.00091   19.7   0.0    1.9  1  HATPase_c     Histidine kinase-, DNA gyrase B-, and HSP90-lik
  ------ inclusion threshold ------
       0.12   12.9   0.0          3    8.4   0.0    3.0  2  AAA_18        AAA domain
       0.13   12.6   0.0       0.35   11.1   0.0    1.8  1  PAS_9         PAS domain
       0.13   12.2   0.0       0.36   10.7   0.0    1.7  1  NTPase_1      NTPase
       0.16   11.7   0.1       0.82    9.5   0.0    2.1  2  AAA_29        P-loop containing region of AAA domain


Domain annotation for each model (and alignments):
>> Response_reg  Response regulator receiver domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       4.3   5.6e+03      12      36 ..      17      41 ..      14      46 .. 0.85
   2 !   59.3   0.0   2.8e-19   3.6e-16       1     111 [.    2170    2288 ..    2170    2289 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 4.3
                  HHHHHHHHHTTEEEEEEESSHHHHH CS
  Response_reg 12 ellrqlleeegyeevaeaedgkeal 36
                  ++l+  le+e yeev e+++  +++
    EPX73596.1 17 SILKYTLESEPYEEVYEVDNTYALY 41
                  689999*************998876 PP

  == domain 2  score: 59.3 bits;  conditional E-value: 2.8e-19
                    EEEESSSHHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHH...ESEEEEESSCSSSEHHHHHHHHHHCTTT......SEEEEEESSTSHHHH CS
  Response_reg    1 vlivdDdplvrellrqlleeegyeevaeaedgkealellkeek...vdlillDinmpgmdGlellkeireedpe......lpviiltahseeeda 86  
                    +l+++D+ +vr  l ++le+ g+  v++a+dgkea++l+ ++    ++l ++D  mp+ dG+ + k++re +++      +p+++lta  + +  
    EPX73596.1 2170 ILVAEDNSVVRLTLCKQLEHLGL-LVESAKDGKEAIDLITSHPcgyYGLAFIDYHMPHYDGIGVSKKMREFEQKnhfafsVPIVLLTADIQPSIE 2263
                    89*********************.******************9999***********************99944456666*************** PP

                    HHHHHCTESEEEESSG-HHHHHHHH CS
  Response_reg   87 vealkagaddflsKpfdpeeLlkal 111 
                    v   ++g+ ++++Kp+++++Ll++l
    EPX73596.1 2264 VGKEEIGITKYVTKPIRKDRLLEIL 2288
                    *********************9986 PP

>> HisKA  His Kinase A (phospho-acceptor) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.7   0.1   5.3e-17   6.8e-14       2      67 .]    1749    1813 ..    1748    1813 .. 0.96

  Alignments for each domain:
  == domain 1  score: 51.7 bits;  conditional E-value: 5.3e-17
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHC..T-HSSCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH CS
       HisKA    2 lgrflagvaHELrtPLsailgnaeaLkregklteelkeyletiesearrldhlvedlLdlsrieag 67  
                  ++ fla+++HELrtP s+ +g++++L + ++l+ e+++ ++ ++ + + l+++++dlL +s++eag
  EPX73596.1 1749 RSNFLANISHELRTPFSGFYGMLSLLDE-ANLDYEQRDIVNAARLSCEMLLQVINDLLNFSKLEAG 1813
                  689***********************77.499********************************97 PP

>> GAF_2  GAF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.4   0.0   5.3e-13   6.8e-10       2     137 ..    1442    1585 ..    1441    1586 .. 0.78

  Alignments for each domain:
  == domain 1  score: 39.4 bits;  conditional E-value: 5.3e-13
                  HHHHHHHHHHHHHHHHSS....EEEEEEE-TTS-EEEEEEEES-TTSTT-S-B--.......-TTHHHHHHHHTS-EEES-GGG-S-HHHHH..HHH CS
       GAF_2    2 adleelldlvldelvelg..aalgyillvdddgglrlaawgeaeeefgaaldrpl.......geglvgealrtgrpvilndleedpdkkglp..agh 87  
                  ++le ll++++++++e +  a+++ i++ d d+++++aa++ +  + g +++ p+        + ++ ++++t+++++ +++  d + ++++   + 
  EPX73596.1 1442 TELEGLLSTMTQRMLE-DssADAAAIVIRD-DTHFTVAAYRTENINEGFSPPIPIsekqkfvPSKVINYVVHTQKALFSHSIHKDFNLQNEEwnKQN 1536
                  68999*********99.5425566666655.58877776665555555555444477777855559************9999998888887777888 PP

                  HTT--EEEEEE-TTS---EEEEES.......--HHHHHHHHHHHHHHHHHH CS
       GAF_2   88 aglrsflavPlisegrvvGvlnlyankppa.fdeedlelLeelaeqiaiai 137 
                   + +s +++Pl+++  v+++l l+  +pp+ f  ++l++L+ l++q+++ai
  EPX73596.1 1537 SKGKSAIVIPLFQKKTVFAILYLQ--GPPFsFHHRHLSVLSILGSQVSFAI 1585
                  899999*******889******93..55556*******************9 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   0.0   2.6e-10   3.3e-07       3     161 ..     325     551 ..     323     559 .. 0.83
   2 ?   -3.1   0.0       6.8   8.7e+03     116     149 ..     878     914 ..     829     922 .. 0.65

  Alignments for each domain:
  == domain 1  score: 30.8 bits;  conditional E-value: 2.6e-10
      AAA_16   3 vGReeeleqLlsalervrsgrp..................elvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipy..salaqalareel 81 
                 +GRe+e+e+++s+l+ + s +                    ++l++G+ GvGK + ++ + +   +++g+ + +kc+ +    ++  sal++ + + +l
  EPX73596.1 325 YGREREIEKVKSLLRHTESTSLpldspsyqssqtshvdhtVVILVTGPEGVGKATFIQDVCD---RKEGYMAITKCEPS---KSFldSALISGI-A-KL 415
                 899999999999999777766678888889999999999999***************99996...6669**********...566557799999.6.78 PP

      AAA_16  82 lrqlldeaesaeleawrekleeala.....................................................avpelagaea........... 116
                 l qll+e +  ++ ++ +kl+++l+                                                     +                    
  EPX73596.1 416 LLQLLAENQR-LVYDFFHKLKDSLKgdishlnpffdvvpevkpflqknpyigeiaflsassnesmkssssaghslsgqD--------Iqheseqrnqfg 505
                 8888888555.99999999****************************************99998888877555553331........255555677889 PP

      AAA_16 117 ..srllellkrllallsrderplvlvlDdlqwadeaslqllaaLlrl 161
                    ++  +l  ll+ +s+ +r   +v+ +++ ade s ++l++L r 
  EPX73596.1 506 hqVSFSSALITLLNIISSIKR-STIVIKNIHYADELSIDVLECLIRC 551
                 997777777777766666455.88********************985 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 6.8
      AAA_16 116 a...srllellkrll.allsrderplvlvlDdlqwade 149
                      r + l  ++l + +++de+ l lvlD l ++d+
  EPX73596.1 878 TteaFRSRLLRCQILfEGARTDES-LSLVLDYLSQLDF 914
                 244433333334455589999787.9999998877765 PP

>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2   0.2   1.1e-10   1.4e-07      63     256 ..      89     284 ..      83     291 .. 0.72

  Alignments for each domain:
  == domain 1  score: 31.2 bits;  conditional E-value: 1.1e-10
                 EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEE.EETTTE.EEE.-SGTTSEESSSSCS..... CS
     Pkinase  63 lyevfeekdelylvleyveggeladllerkgslseeeakkiakqilegleylHskgiiHrDlKpeNiL.idekge.lKi.tDFGlakelesssk..... 153
                 ++e+ + + + y++l+  + ++l +++       + +  +++  +++ +e+lHsk i+H  + ++ +  i++ ++ l++ +  G+++  +  +      
  EPX73596.1  89 FIEFSHIDLSAYVCLDAGHRNTLSTFYGY-FRNHPIHYIRYCIAVCRCVEFLHSKDIVHGEIRSDSFRpINNYEDvLMLnIGSGVSSFHNYLQAynwrr 186
                 56666666677777777777777777753.22334456688999*******************999852454444333323346666666555578888 PP

                 ...BCTTTSCGGGS-HHHHTTSCB..SHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCT.SHH...HHHTTS-HHHHHHHHHHT- CS
     Pkinase 154 ...ltsfvgtseYlAPEvlkeney..skkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilg.etkeklpeaseiseeakdllkkllk 246
                     ++ +   +Y++PE  ++++y  ++ +D++slG+++y  lt   + + +     + +       i+ il+ +    ++   +i++++ ++++k+ k
  EPX73596.1 187 fyeDSQSMSRITYISPEQTGRTSYpvDHRTDIYSLGILFYYCLTDGYLHELS-----FIQT------IRSILTeNLPSIVDVCPNIPRTIFKIIEKMTK 274
                 976666777789*******8877777*****************999998822.....2222......3334443444556778999************* PP

                 SSGCCSTTHH CS
     Pkinase 247 kdpkkRltae 256
                 k+p++R+t  
  EPX73596.1 275 KNPNDRYTSC 284
                 *******954 PP

>> PAS_3  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.0   0.0   7.5e-10   9.6e-07      24      87 ..    1664    1728 ..    1656    1730 .. 0.87

  Alignments for each domain:
  == domain 1  score: 29.0 bits;  conditional E-value: 7.5e-10
       PAS_3   24 eswldlvhpeDrervrealqealkkgepyegeyRirrkdGeyrwveararvi.rdengkpvrvig 87  
                  + ++dlvhpeD + +++ +    + ++p+e e+Ri+rkdG yr+  +r++++   +++kp+++ +
  EPX73596.1 1664 NIYKDLVHPEDYSMLEQYIRSQSDVNAPFEKEIRIKRKDGIYRCNLSRCTPVlTESKSKPIYICA 1728
                  56789*******999999998888888*************************9999999987755 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.0     1e-07   0.00013     104     251 ..     124     282 ..     118     288 .. 0.73

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 1e-07
                  HHHHHHHHHHHHHHHHHHTTEEEST-SGGGEE.EEE.......TTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE..EEHHHHHHHH CS
  Pkinase_Tyr 104 dllsfalqvAkGmeyLeskklvHrdlaarNvL.lse.......nkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk..ftsksDvWsf 191
                  + +++++ v++ +e+L+sk++vH ++++     +++       n    +s f    + ++  + ++++++  ++ +++pE   +++  + +++D++s 
   EPX73596.1 124 HYIRYCIAVCRCVEFLHSKDIVHGEIRSDSFRpINNyedvlmlNIGSGVSSFHNYLQAYNWRRFYEDSQSMSRITYISPEQTGRTSypVDHRTDIYSL 221
                  56899*********************99765323332222222333344455444555566666999***************9998556899****** PP

                  HHHHHHHHTTSSGTTTTSHHHHHHHHHHTTEE...S-BBTTSBHHHHHHHHHHT-SSGGGS-- CS
  Pkinase_Tyr 192 GvllwEiftlgespypglkneevleklkegkr...lekpekcpeelyelmkkcweedpeeRpt 251
                  G+l +  +t g     +l+  ++++ + +++    ++   ++p+++ ++++k  +++p++R t
   EPX73596.1 222 GILFYYCLTDGYLH--ELSFIQTIRSILTENLpsiVDVCPNIPRTIFKIIEKMTKKNPNDRYT 282
                  *****999988754..455555555554443311256667788999************99965 PP

>> GAF  GAF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0   1.5e-07    0.0002       2     133 .]    1444    1585 ..    1443    1585 .. 0.75

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 1.5e-07
                  HHHHHHHHHHHHHHHHTESEEEEEEEEETTEEECEEEEECC.............EEEET.....TSHHHHHHHHHSSSEEESTGGTSTTHHTTHHHH CS
         GAF    2 leelldtvveelrellgadrvalylpdydGlhydipqasrw.............lfmkn.....grgicgqvlatgqplvipdstpdprfaqynrrd 80  
                  le ll t ++++ e   ad +a+ +  +d+ h+ + +a r              +   +     ++ ++++v++t+++l  +    + +f+ +n+  
  EPX73596.1 1444 LEGLLSTMTQRMLEDSSADAAAIVI--RDDTHF-TVAAYRTeninegfsppipiS---EkqkfvPSKVINYVVHTQKALFSHS--IHKDFNLQNEEW 1532
                  78899******************99..444467.444444444444444343321...1222334446789***999999996..788877766777 PP

                  HHHHTTESEEEEEEEEETTEEEEEEEEEESSS.CSHHHHHHHHHHHHHHHHHHH CS
         GAF   81 llenmgirsslvvPlvndgelwGllvlhnpsp.pftreelellqvladqvaval 133 
                    +n   +s++v+Pl+++  ++++l+l  p p +f+   l +l  l++qv+ a+
  EPX73596.1 1533 NKQNSKGKSAIVIPLFQKKTVFAILYLQGP-PfSFHHRHLSVLSILGSQVSFAI 1585
                  77888888*********************6.5578***************9987 PP

>> GAF_3  GAF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0   2.3e-07    0.0003       2     127 ..    1444    1585 ..    1443    1587 .. 0.70

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 2.3e-07
       GAF_3    2 ldellekllkllvkllgaevgalllldedgnklqvaagwdgkpalsesld.......edsalarralssgevvsepsfae..........edglpdr 81  
                  l+ ll++  +++ +  +a+++a++++d+   ++++ + ++ ++ +s  ++        +s+++ +++ ++ +++  s ++          ++++ + 
  EPX73596.1 1444 LEGLLSTMTQRMLEDSSADAAAIVIRDDTHFTVAAYRTENINEGFSPPIPisekqkfVPSKVINYVVHTQKALFSHSIHKdfnlqneewnKQNSKGK 1540
                  6778888888888889999999988885533444434445555666644422112234555555888888888775544422223222445778889 PP

       GAF_3   82 aalavPLvagrqviGvlalastkprafdaedlelleslArqiatai 127 
                  +a+++PL  + +v+ +l+l+ ++ ++f  ++l+ l+ l++q++ ai
  EPX73596.1 1541 SAIVIPLFQKKTVFAILYLQGPP-FSFHHRHLSVLSILGSQVSFAI 1585
                  99*******************88.66*******************9 PP

>> HATPase_c  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   7.1e-07   0.00091       1     107 [.    1861    1973 ..    1861    1980 .. 0.73

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 7.1e-07
                  EHHHHHHHHHHHHHHHHHHHHSTTTEEEEEEEEEE......TEEEEEEEESSSSSTTHHHTGTCSTTCH..HCSTCHTSTSSSHHHHHHHHHHHHTT CS
   HATPase_c    1 gdekrLrqiisnlvdNavkfatkageieveikase......ddlvisveDnGiGipkedlkklfekfsq..ddstkrggggtGlGlsivkklvelmg 89  
                  gd +++ q+++ ++dN+vk   ++g i+v+   se       +l++ veD+ +  +   + +l  ++ +  +d+   + +g+ lG+s + +l++ mg
  EPX73596.1 1861 GDASKIGQMLKSILDNSVKM-VESGFIRVKAYISEngtnddLRLTFIVEDSRPHKNAMFQANLINSLNKycNDYLPMDLSGSALGMSTCLQLCKIMG 1956
                  6888999************6.67776666666533445544788888***99998887777666655555336666667****************** PP

                  TEEEEEEETTTEEEEEEE CS
   HATPase_c   90 GeiwvesepgrGttftft 107 
                  G++ v+ ++    tf+++
  EPX73596.1 1957 GSVFVTVSE-TSPTFRIC 1973
                  ***994433.45556655 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.0    0.0023         3       1      44 [.     367     433 ..     367     461 .. 0.63
   2 ?    0.3   0.0      0.76   9.8e+02      30      97 ..    2161    2236 ..    2145    2258 .. 0.71

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0023
      AAA_18   1 IlltGtpGvGKttlakeLskrl.gf......................gvnlrdvakenglllevdpe 44 
                 Il+tG+ GvGK t+ + + +r  g+                         l+ +a + +l+++++++
  EPX73596.1 367 ILVTGPEGVGKATFIQDVCDRKeGYmaitkcepsksfldsalisgiaKLLLQLLAENQRLVYDFFHK 433
                 99**************994444367666766664444444444444444444444444444444443 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.76
      AAA_18   30 dvakenglllevdpealdeskrldedkldklldaleenssaleegknlvidghlaeleseaakdikk...........v 97  
                  ++++++++++ v ++  ++  rl   k+ ++l +l e+++  +++   +i +h++ ++  a++d+++           +
  EPX73596.1 2161 QNWRHKEIRILVAED--NSVVRLTLCKQLEHLGLLVESAK-DGKEAIDLITSHPCGYYGLAFIDYHMphydgigvskkM 2236
                  556666677777777..77777777788888899999876.8888888*******999999999997666665555550 PP

>> PAS_9  PAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00027      0.35      37     102 ..    1667    1732 ..    1638    1734 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00027
       PAS_9   37 tdlfvtdpeanerlraaleqgrk..kerevevvlirkngetfwvlltaspvkdddgelvgiivilrDi 102 
                  +dl+  +pe+ + l++++++ ++   ++e+e+ + rk+g +  +l +++pv  +++    +i+  +Di
  EPX73596.1 1667 KDLV--HPEDYSMLEQYIRSQSDvnAPFEKEIRIKRKDGIYRCNLSRCTPVLTESKSKPIYICATIDI 1732
                  5667..9********************************999999******99988888899999998 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00028      0.36       2      21 ..     367     386 ..     366     392 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00028
                 EEEE--TTSSHHHHHHHHHH CS
    NTPase_1   2 vfiTGppGvGKtTlvkkvle 21 
                 +++TGp GvGK T+++ v++
  EPX73596.1 367 ILVTGPEGVGKATFIQDVCD 386
                 89***************997 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       1.9   2.4e+03       3      17 ..     178     192 ..     177     200 .. 0.75
   2 ?    9.5   0.0   0.00064      0.82      14      39 ..     355     381 ..     351     384 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 1.9
      AAA_29   3 rlqlvNWgtfdghti 17 
                 +lq +NW  f + + 
  EPX73596.1 178 YLQAYNWRRFYEDSQ 192
                 6899****9987544 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00064
      AAA_29  14 g.htieidlkgatlltGpsGsGKSTll 39 
                   +t ++d   ++l+tGp G+GK T++
  EPX73596.1 355 SsQTSHVDHTVVILVTGPEGVGKATFI 381
                 4477788866699************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2293 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       641  (0.0357521); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 1.15u 0.32s 00:00:01.47 Elapsed: 00:00:00.51
# Mc/sec: 13497.92
//
Query:       EPX73597.1  [L=136]
Description: 60S ribosomal protein L27 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.9e-37  125.3   2.4    1.2e-36  124.9   2.4    1.2  1  Ribosomal_L27e  Ribosomal L27e protein family
    0.00018   21.3   0.2    0.00048   20.0   0.2    1.8  1  KOW             KOW motif


Domain annotation for each model (and alignments):
>> Ribosomal_L27e  Ribosomal L27e protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.9   2.4   1.3e-40   1.2e-36       1      85 []      52     136 .]      52     136 .] 1.00

  Alignments for each domain:
  == domain 1  score: 124.9 bits;  conditional E-value: 1.3e-40
  Ribosomal_L27e   1 kVtkkmskkkiakrskikpFvKvvnynhlmpTRYtvdvedlkelvkkealkdpakrkeakkevkkkfeeryksgknkwffkkLrF 85 
                     kVtk+m++k+iakrs++kpFv+vvn+nhlmpTRY++++ +lk lv+ e++k+p++r++akk +kk+fee+y++gk++wff++LrF
      EPX73597.1  52 KVTKSMGAKRIAKRSRVKPFVRVVNFNHLMPTRYALELDNLKGLVSAETFKEPSQRSAAKKVIKKTFEEKYQTGKSAWFFTPLRF 136
                     9***********************************************************************************9 PP

>> KOW  KOW motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.2   5.4e-08   0.00048       1      25 [.       7      31 ..       7      45 .. 0.89

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 5.4e-08
                TTSEEEESSSTTTTCEEEEEEEETT CS
         KOW  1 pGdhVkVvsGphkGktGkVvkvdqh 25
                pG++  V++G+++Gk+ ++++  ++
  EPX73597.1  7 PGKVALVTRGRFAGKKVVILQTLDQ 31
                8******************998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       384  (0.0214178); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.27s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 958.52
//
Query:       EPX73598.1  [L=554]
Description: GABA-specific permease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-67  228.5  44.4    1.6e-67  228.2  44.4    1.1  1  AA_permease_2  Amino acid permease
    2.1e-18   66.2  37.0    2.7e-18   65.8  37.0    1.1  1  AA_permease    Amino acid permease
  ------ inclusion threshold ------
       0.12   12.6   0.2       0.28   11.4   0.2    1.6  1  DUF1378        Protein of unknown function (DUF1378)


Domain annotation for each model (and alignments):
>> AA_permease_2  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  228.2  44.4   2.7e-71   1.6e-67       1     423 [.      63     506 ..      63     508 .. 0.90

  Alignments for each domain:
  == domain 1  score: 228.2 bits;  conditional E-value: 2.7e-71
  AA_permease_2   1 lsllsafalvigsvigsgifvkn...laasggpalilwvwiavligslavllvyaElssalprsgGiyvytkaa....fgkkvaflsawfnwfayv 89 
                    lsl+s+f ++++++  +++++++   ++++ g   ++w+wi++++++ +v+l +aEl+s +p+sgG+y  ++ +    +g+++ ++++w+n ++++
     EPX73598.1  63 LSLFSVFSVSFSLLGLLPSVATTmtyNLGYIGSPGLVWGWIIAIALVECVALSMAELCSSMPTSGGLYYAAAVLapegWGPFASWVTGWSNYLGQL 158
                    799***********99999988877788889999***********************666********9998775555799999************ PP

  AA_permease_2  90 pvlasilsvaasyllnalgp...dlqgntwltyliaiaililvalinirgikesakiqnilgilkillpliiliilglitvdgggfsslstetdtf 182
                    ++ +si+++ as+ll+a++    ++++++++ +l+  +i+++ a+i ++ +k +a+++++ ++l++l++li++i++  ++++++gf++++  ++ +
     EPX73598.1 159 IGGPSINYSTASMLLGAVSVahpSYTPSNYQLFLVTLVITAVNAFIASLPTKLIARYNSFSTYLNTLFFLITFIVILAFAGKNHGFNDSHAVWGDI 254
                    **************999754444****************************************************************998888776 PP

  AA_permease_2 183 fpn.gwp.g..vllgllivlwsfdGfesaanvseevkk.k.dvpkaifigllivlvlyllvniaflgvvpddeianlsnlgsvaalffeavggkvv 272
                    ++   wp g  vl+++++++w+++G+++  ++see  +   ++p++i++ + i +++++++++ +++ + d +  +  ++ s++a ++ +v ++ +
     EPX73598.1 255 TNYtDWPdGfaVLMSFCGAIWTMSGYDAPFHMSEETANaSvNAPRGIVLTATIGGLMGWVMQLIIAYTMVDQNAVVHTDS-SMWATYLSQVMSQKA 349
                    666588874467***********************8886459*************************9999887654553.58************* PP

  AA_permease_2 273 aiivvilialsllgaintavigssrvlealardgvlP..rffakvn.kfgspiraiiltaivslillllfllassaaynfllsvsslgliisylll 365
                    ai+++ l+++s+++++ +  +++sr++++ ardgvlP  + fakvn k+++p++a+ l++ +  +++l++++a +  +++++sv+++g+++ ++ +
     EPX73598.1 350 AIAIISLTVVSSFIMGQGNATACSRIAYSYARDGVLPfsDTFAKVNsKTKTPVNAVLLDFCFH-VCVLFLIFAGEVTIDAVFSVTAIGAFVAFTTP 444
                    *************************************************************99.56666667779********************* PP

  AA_permease_2 366 iigalilrkkrphlkr.....pgkilvaiigalfllfllvalffppkgpatqssliytiiltv 423
                    i+ +++ ++++ + +      + + ++++++++f+ +++ +l+fp+++  +++ +++t+++++
     EPX73598.1 445 ICMRVFFKDNKFRPGPwnlgkFSR-IIGAFSCFFVALMIPVLCFPTVKNPAPKDMNWTCLVFG 506
                    *****9999977664423321444.59*******************************99886 PP

>> AA_permease  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.8  37.0   4.6e-22   2.7e-18      16     462 ..      84     514 ..      70     528 .. 0.73

  Alignments for each domain:
  == domain 1  score: 65.8 bits;  conditional E-value: 4.6e-22
  AA_permease  16 fvglgvvlsqaGplgallayllagvviflvmlslgeiatngpksggfyt....yasrflgpelGfviGln.ylfswitvlaleltaasiliqfwelvt 108
                   + + + l+ +G  g++ ++++a++ + +v+ls++e+ + +p sgg y+    +a + +gp +++v+G++ yl + i +  + + +as+l++ +    
   EPX73598.1  84 TT-MTYNLGYIGSPGLVWGWIIAIALVECVALSMAELCSSMPTSGGLYYaaavLAPEGWGPFASWVTGWSnYLGQLIGGPSINYSTASMLLGAV--SV 178
                  44.44445555555999*************************99998754444999*************98888888888899********999..33 PP

  AA_permease 109 dlpkawvt.....gavflvvlliinlvgvkvygeaefilalikiiaiiafiivg.iillaggkpnkga.gfrflgdngsifknnlppgfakeeegafk 199
                  + p   +t       ++++v++++n + + +  +    ++++       f++++ i++la +++n+g    + ++ + ++  ++  +           
   EPX73598.1 179 AHP--SYTpsnyqLFLVTLVITAVNAFIASLPTKLIARYNSFSTYLNTLFFLITfIVILAFAGKNHGFnDSHAVWGDITNYTDWPDGF---------- 264
                  333..23334556555555666666665555555444455555444444444443333333333333234567777777666665555.......... PP

  AA_permease 200 nfisvfvivvfaftGielvaiiagEvkdPeksiPkailqvviritifYvlsllligllvprndlgllndsasaaspfvifikesgvsvlaplinavil 297
                  ++++ f  ++ +++G+ +   +++E+++ + + P++i  +  + +++   + l+i  ++++++  + +d    +s   ++++  ++  +a  i+ ++ 
   EPX73598.1 265 AVLMSFCGAIWTMSGYDAPFHMSEETANASVNAPRGIVLTATIGGLMGWVMQLIIAYTMVDQNAVVHTD----SSMWATYLSQVMSQKAAIAIISLTV 358
                  899999********************************9999999998888877777777777555553....46789******************** PP

  AA_permease 298 taalssansslysasRvlyslakdglaP...kvlkkvskrgvPlraillsmiisllalllaslnlaapivfnfllaisaliglivwlliilsylrfRk 392
                  ++ + ++ +  +++sR+ ys+a+dg++P   +++k+ sk + P++a+ll +++ + + l   ++ +  ++++ + +++a+ +++ ++  i+  + f+ 
   EPX73598.1 359 VSSFIMGQGNATACSRIAYSYARDGVLPfsdTFAKVNSKTKTPVNAVLLDFCFHVCV-LFLIFAGE--VTIDAVFSVTAIGAFVAFTTPICMRVFFKD 453
                  *************************************************99887544.46677777..89999************************* PP

  AA_permease 393 alkyqgrsieelgfkaallplgvilvlaaliiillilalyayltvkkg.pkdwgaasfaaaylivllflii 462
                   ++  g ++        l+ +  i++ +++ +++l+  +  + tvk++ pkd++++  ++     ++++i+
   EPX73598.1 454 NKFRPGPWN--------LGKFSRIIGAFSCFFVALMIPVLCFPTVKNPaPKDMNWTCLVFGG--PMMLIIL 514
                  999999988........555555555555555555444444433333223555555444333..3333333 PP

>> DUF1378  Protein of unknown function (DUF1378)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.2   4.7e-05      0.28       4      24 ..     402     422 ..     399     430 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 4.7e-05
     DUF1378   4 vnlllLYFCtvvcvLYLvsGG 24 
                 vn +lL FC  vcvL+L+  G
  EPX73598.1 402 VNAVLLDFCFHVCVLFLIFAG 422
                 899**************9877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (554 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       639  (0.0356406); expected 358.6 (0.02)
Passed bias filter:                      257  (0.0143343); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.22s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 4080.10
//
Query:       EPX73599.1  [L=482]
Description: ammonium transporter Amt1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   4.2e-117  391.2  24.0   4.8e-117  391.0  24.0    1.0  1  Ammonium_transp  Ammonium Transporter Family
     0.0066   16.6   2.0     0.0066   16.6   2.0    4.1  4  EamA             EamA-like transporter family


Domain annotation for each model (and alignments):
>> Ammonium_transp  Ammonium Transporter Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  391.0  24.0  5.4e-121  4.8e-117       2     399 .]      35     437 ..      34     437 .. 0.98

  Alignments for each domain:
  == domain 1  score: 391.0 bits;  conditional E-value: 5.4e-121
                      HHHHHHHHHHHHHHHHHHHHHHHSSGGGHHHHHHHHHHHHHHHHHHHHHTHHHHHHSSCBSSSSSCE-.......TTTTSCCGCCTTCCHHHHH CS
  Ammonium_transp   2 flllsaalvifmqagfalleaglvrsknvlnilvknlldlavvvllyvlfGyslafgkskgvsgfign.......lglsaagvqdetlldglff 88 
                      ++l+s+alv++m +g++++++gl r+k+++++l+ +++++avv ++++++Gysl+f+++  ++ +ig+       + l+  ++  + l+d+lf 
       EPX73599.1  35 WILASTALVFIMIPGVGFFYSGLARRKSAISMLFLSMMSVAVVAFQWFFWGYSLTFSHN--GGPYIGSlanfglrQTLGRPSSVASGLPDILFC 126
                      9*********************************************************9..99999999999997777777888889999**** PP

                      HHHHHHHHHHHHHHHHHCTTTB-HHHHHHHHHHHHHHTHHHHHHHHHS.SSHHHHTT--.-SSSTTTTHHHHHHHHHHHHHHHS-STTTTGTTT CS
  Ammonium_transp  89 lfqlafaataitivsgavaerikfsayllfsallgtlvyppvahwvwgeggwlaklgvliDfAgstvVHlvggvagLaaalvlgkregrfegke 182
                      +fq +faa++ ++  ga+a+r ++ + l+f +l++t+vy p+a w+w+ +gwl++lg + DfAg++ VH+ +g+ +La+ +v+gkr++ +   +
       EPX73599.1 127 VFQGMFAAITPALAIGAAADRGRMLPCLVFVFLWSTIVYDPIAFWTWNPKGWLSTLGSY-DFAGGSPVHIASGMTALAYSIVVGKRHDHG---T 216
                      ***********************************************************.***************************988...9 PP

                      SS--GSBHHHHHHHHHHHHHHHHHHHHGGGSSSSHHHHH.HHHHHHHHHHHHHHHHHHHHHHHCSS-BHHHHHHHHHHHHHHHTTTTTTS-HHH CS
  Ammonium_transp 183 eaikghnlpfavlGtllLwfgWfgFNaGsaltankrararaavtTllAaaagaltallisrlkegkinvlglanGilAGlVAiTaacavvepwg 276
                       ++++hn+p +vlGt+lLwfgWfgFN+Gsa +an ra   a+v+T +Aa++g+++++l +++++ +++ +g + G++AGlVAiT++ ++v pw+
       EPX73599.1 217 VQYRPHNVPHVVLGTVLLWFGWFGFNGGSAGSANIRAVM-ACVVTHIAASVGGIIWCLWDYIRTRHWSAVGFCCGAVAGLVAITPGSGFVPPWA 309
                      **************************************9.****************************************************** PP

                      HHHHHHHHHHHHHHHHHHHHHHHTC-CTTHHHHHHHHHHHHHHHHHHHHTSHHHC....SSHSSTTGGGT-CHHHHHHHHHHHHHHHHHHHHHH CS
  Ammonium_transp 277 AliiGlvAgvlsvlgvkklkeklkidDsldvvavHgvgGiwGllavgifaaekvv....askisggllsgegkqlvvqligilvilayafvvtl 366
                      A++iG v++  ++ ++ +lk+ +++dD+ld++a Hg+gG++G +++++f+a++ +     ++++gg+ls+++ ql++ql+ ++ ++ay+fvv+ 
       EPX73599.1 310 AVVIGGVGASACYGAT-YLKRIIRVDDALDIFAEHGIGGMVGNILTALFSADYIQsldgSTGNKGGWLSHHYIQLGYQLADTVSCAAYSFVVSC 402
                      ***************9.6**********************************999***999********************************* PP

                      HHHHHHHHHTT..SB--HHHHHHSHHHHHHSSSSB CS
  Ammonium_transp 367 illlllklllg..LrvseeeeevglDvaehgetay 399
                       ll+++++++g  Lrvs+++e +glD+ e+get y
       EPX73599.1 403 ALLYIMNYIPGlsLRVSRDDEVLGLDTVEIGETSY 437
                      ***********99*******************988 PP

>> EamA  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   2.0   7.4e-07    0.0066      65     121 ..      34      92 ..      22     100 .. 0.81
   2 ?    1.4   1.0     0.036   3.2e+02      13      67 ..     132     179 ..     121     202 .. 0.55
   3 ?   -0.2   2.3      0.12   1.1e+03      22      75 ..     245     298 ..     226     305 .. 0.76
   4 ?    0.4   0.0     0.073   6.6e+02      25      55 ..     385     415 ..     378     426 .. 0.78

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 7.4e-07
        EamA  65 lll.lllgl.lgtvlafllffyalkktsasnaslitslePvftlilsvlllgekltlkq 121
                  ++ + ++l + ++ + ++f+++l + ++++ +l++s++ v ++ + ++++g +lt+++
  EPX73599.1  34 SWIlASTALvFIMIPGVGFFYSGLARRKSAISMLFLSMMSVAVVAFQWFFWGYSLTFSH 92 
                 444244444255666779*************************************9975 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.036
        EamA  13 fwaiyfvls.killrkvspltltfvrfliagillliiallkegklaklslkdwlll 67 
                 f ai++ l+  ++  +   l  +++ fl ++i+  +ia+++++++         +l
  EPX73599.1 132 FAAITPALAiGAAADRGRMLPCLVFVFLWSTIVYDPIAFWTWNPK--------GWL 179
                 444444444333444444444444444555555555555544444........333 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.12
        EamA  22 killrkvspltltfvrfliagillliiallkegklaklslkdwllllllgllgt 75 
                  ++++++  +++++v+ ++a++  +i++l+  ++ + +s  ++ + ++ gl+++
  EPX73599.1 245 SAGSANIRAVMACVVTHIAASVGGIIWCLWDYIRTRHWSAVGFCCGAVAGLVAI 298
                 556778888999999999999999999999999998888888888888888766 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.073
        EamA  25 lrkvspltltfvrfliagillliiallkegk 55 
                 ++  ++++ ++++f+++ +ll i+  + + +
  EPX73599.1 385 YQLADTVSCAAYSFVVSCALLYIMNYIPGLS 415
                 55568899999****9999999998776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (482 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       720  (0.0401584); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.38
# Mc/sec: 3827.53
//
Query:       EPX73600.1  [L=50]
Description: hypothetical protein SOCG_02818 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (50 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       483  (0.0269396); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.24s 00:00:00.60 Elapsed: 00:00:00.40
# Mc/sec: 375.60
//
Query:       EPX73601.1  [L=511]
Description: hypothetical protein SOCG_02820 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   9.5e-108  360.8  32.1   1.1e-107  360.6  32.1    1.0  1  AA_permease    Amino acid permease
    2.1e-38  132.3  36.6    2.6e-38  132.0  36.6    1.1  1  AA_permease_2  Amino acid permease
     0.0052   15.5   3.4     0.0052   15.5   3.4    2.0  2  EMP70          Endomembrane protein 70


Domain annotation for each model (and alignments):
>> AA_permease  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  360.6  32.1  1.8e-111  1.1e-107       2     476 ..      21     488 ..      20     491 .. 0.97

  Alignments for each domain:
  == domain 1  score: 360.6 bits;  conditional E-value: 1.8e-111
  AA_permease   2 vlvialggviGtglfvglgvvlsqaGplgallayllagvviflvmlslgeiatngpksggfytyasrflgpelGfviGlnylfswitvlaleltaasi 99 
                  +++ a gg iGtglf+g+g+ l++ Gp+++ll++ ++gv ++++ml+lge+a+++p++g+f ty+  +++++++f+  +ny++++ ++la  + a+  
   EPX73601.1  21 IQMLAFGGTIGTGLFLGIGSSLAESGPAALLLSFCIIGVSVYCTMLALGEMAVYMPVAGSFCTYVGSYVDESFSFALTWNYWLNDTIALASHVLASRL 118
                  89************************************************************************************************ PP

  AA_permease 100 liqfwelvtdlpkawvt...................gavflvvlliinlvgvkvygeaefilalikiiaiiafiivgiillaggkpnkga.gfrflgd 177
                  l+ fw   + lp +++                     ++ l+v +++n++ v ++ge+e++la ik+ +++ f ++g +++ g +++++  gfr++++
   EPX73601.1 119 LVDFWLPDPVLP-TDGSsfstsfgvrctreivrtvtPIISLLVNVGLNMLPVDGFGEIEYWLAAIKVFTVALFCVIGLVTNLGINTENEFiGFRYWKN 215
                  *****5555566.66668****************9977999999****************************************************** PP

  AA_permease 178 ngsifknnlppgfakeeegafknfisvfvivvfaftGielvaiiagEvkdPeksiPkailqvviritifYvlsllligllvprndlgllndsasaasp 275
                  +g+     + +g        f +fis fv ++faf+G+e++ai+agE+ +P ks+Pkai+++ +r++ +Y+ +++++g+ +p n +gl  ds+   sp
   EPX73601.1 216 PGA-----FHNG--------FGGFISSFVNAAFAFAGTESIAIAAGEALNPVKSLPKAIRSMSFRVLTLYIVGVIVVGINIPFNTPGLNGDSVRM-SP 299
                  ***.....9999........*************************************************************************99.** PP

  AA_permease 276 fvifikesgvsvlaplinaviltaalssansslysasRvlyslakdglaPkvlkkvskrgvPlraillsmiisllalllaslnlaapivfnfllaisa 373
                  f +++++ gv+++a+l+navil++als++n sl++++R+lysla+ g+aP +++k++++gvP+ a+l+++ ++ l+ll + +     +++ fll+i a
   EPX73601.1 300 FTLVFQKFGVPGAASLMNAVILSSALSAGNHSLFAGTRLLYSLARAGHAPNIFSKCNRHGVPWLAVLATSTLAILCLLTSHAG----KTWSFLLNIIA 393
                  *****************************************************************************665554....56********* PP

  AA_permease 374 liglivwlliilsylrfRkalkyqgrsieelgfkaallplgvilvlaaliiillilalyayltvkkgpkdwgaasfaaaylivllfliilvgvklhvk 471
                  +++ + w++i +++lrfRkal++q++ + +l f  +++p g++lv+++++ +ll++++  +++       ++ + f++ y+ ++l+l +++++kl  +
   EPX73601.1 394 VSNQLSWTFIGFTSLRFRKALRKQSKTH-RLVFPNWTYPVGPYLVIILNVVFLLVQGWKSFFP-------FQFSLFLSYYIEIPLVLGLYLVWKLSHR 483
                  **************************66.9*********************************.......9*************************99 PP

  AA_permease 472 nkrpq 476
                  +k+  
   EPX73601.1 484 TKLKT 488
                  98765 PP

>> AA_permease_2  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.0  36.6   4.3e-42   2.6e-38       4     403 ..      19     450 ..      16     472 .. 0.82

  Alignments for each domain:
  == domain 1  score: 132.0 bits;  conditional E-value: 4.3e-42
  AA_permease_2   4 lsafalvigsvigsgifvkn..laasggpa.lilwvwiavligslavllvyaElssalprsgGiyvytkaafgkkvaflsawfnwfayvpvlasil 96 
                    ++  +l++g +ig+g f     ++a  gpa l+l+++i+ + + ++ +l++ E++  +p  g   +y+     + + f  +w +w+   ++l ++ 
     EPX73601.1  19 RQIQMLAFGGTIGTGLFLGIgsSLAESGPAaLLLSFCIIGVSV-YCTMLALGEMAVYMPVAGSFCTYVGSYVDESFSFALTWNYWLNDTIAL-ASH 112
                    667789*********9998787555566652666666766666.9**********99*********************************99.667 PP

  AA_permease_2  97 svaasyllnalgp.....dlqgn..............twltyliaiaililvalinirgikesakiqnilgilkillpliiliilglitvdg.ggf 172
                    ++a   l+ ++ p     +   +               +   +  i+ l++ + +n + + + + i  +l+ +k+ ++++++ ++gl+t  g ++ 
     EPX73601.1 113 VLASRLLVDFWLPdpvlpT---DgssfstsfgvrctrEIVRTVTPIISLLVNVGLNMLPVDGFGEIEYWLAAIKV-FTVALFCVIGLVTNLGiNTE 204
                    7888888999976654440...255566668887775444444458889999***********************.5************6443555 PP

  AA_permease_2 173 ssl..stetdt..ffpngwpgvllgllivlwsfdGfesaanvseevkk..kdvpkaifigllivlvlyllvniaflgvvpddeianlsnlgsv..a 260
                    ++      +++   f ng  g+++++  ++++f+G es+a  + e+ +  k +pkai ++   vl ly++  i++ + +p ++   +++++ +  +
     EPX73601.1 205 NEFigFRYWKNpgAFHNGFGGFISSFVNAAFAFAGTESIAIAAGEALNpvKSLPKAIRSMSFRVLTLYIVGVIVVGINIPFNTPGLNGDSVRMspF 300
                    555885555554577789999************************66656*********************************988888665444* PP

  AA_permease_2 261 alffeavggkvvaiivvilialsllgaintavigssrvlealardgvlPrffakvnkfgspiraiiltaivslillllfllassaaynfllsvssl 356
                    +l+f+++g + +a++++++i  s+l a+n  +++ +r+l++lar g  P+ f+k n++g p+ a+  t +++ il+ll++ a ++  +fll++ ++
     EPX73601.1 301 TLVFQKFGVPGAASLMNAVILSSALSAGNHSLFAGTRLLYSLARAGHAPNIFSKCNRHGVPWLAVLATSTLA-ILCLLTSHA-GKTWSFLLNIIAV 394
                    ***********************************************************************9.888888776.799********** PP

  AA_permease_2 357 gliisyllliigalilrkkrphlkr.........pgk.ilvaiigalfllfllvalf 403
                    ++ +s++++ ++ l  rk  +++ +           + + ++++++l ++fllv ++
     EPX73601.1 395 SNQLSWTFIGFTSLRFRKALRKQSKthrlvfpnwT-YpVGPYLVIILNVVFLLVQGW 450
                    **********9999999998877444667777642.233444444555555554444 PP

>> EMP70  Endomembrane protein 70
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   1.0      0.11   6.6e+02     282     348 ..      52     122 ..      34     144 .. 0.51
   2 !   15.5   3.4   8.7e-07    0.0052     259     405 ..     347     488 ..     338     503 .. 0.71

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.11
       EMP70 282 lllallgflspsnrgslltvalllyvllgliaGYvsarlyktf....ggekwkkntlltalllpgl.lflvf 348
                 l ++++g+  + +  +l ++a++   ++g +  Yv++++ ++f      ++w + t+  a+ + +  l++ f
  EPX73601.1  52 LSFCIIGVSVYCTMLALGEMAVY-MPVAGSFCTYVGSYVDESFsfalTWNYWLNDTIALASHVLASrLLVDF 122
                 44444444333333333333332.334455555666666555522225567777777666655555244444 PP

  == domain 2  score: 15.5 bits;  conditional E-value: 8.7e-07
       EMP70 259 knsllLsvlvGsGvqlllmal.vtlllallgfls.psnrgslltvalllyvllgliaGYvsarlyktfggekwkkntlltalllpgllflvffllnlil 355
                 + ++++s +   Gv  l+++  +tl++ +l + +  ++ + ll+++ +   l+ ++ G++s r+ k +++++  + +++   ++p+   lv++l  ++l
  EPX73601.1 347 HAPNIFSKCNRHGVPWLAVLAtSTLAILCLLTSHaGKTWSFLLNIIAVSNQLSWTFIGFTSLRFRKALRKQSKTHRLVFPNWTYPVGPYLVIILNVVFL 445
                 566777777777887665554044444444443312233445566666677888999***********97788888888899999999999988889** PP

       EMP70 356 wakessgalpfgtlvlllllwflisvPlvliGsllgfkkkaiehpvrtnq 405
                 ++++ ++ +pf+  ++l    + i++Pl ++G +l  k    +h ++ ++
  EPX73601.1 446 LVQGWKSFFPFQFSLFLS---YYIEIPL-VLGLYLVWKL---SHRTKLKT 488
                 **********98766554...56999*9.7899988874...34444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (511 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       578  (0.0322383); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.29s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 3538.30
//
Query:       EPX73602.1  [L=557]
Description: cysteine transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.1e-20   72.0  23.6    6.9e-20   71.3  23.6    1.3  1  MFS_1     Major Facilitator Superfamily
  ------ inclusion threshold ------
       0.11   12.6   0.1       0.11   12.6   0.1    2.3  3  PspB      Phage shock protein B


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.3  23.6   7.7e-24   6.9e-20       6     350 ..     102     460 ..      91     465 .. 0.70

  Alignments for each domain:
  == domain 1  score: 71.3 bits;  conditional E-value: 7.7e-24
       MFS_1   6 flsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalg.lllllfasslwlllvlrvlqGlgagalf 103
                 ++ +++ ++l+ +  l l  d +i++++++ l t++++g++++++p+  l +rf   +++ ++ +l+ l  +l ++ a ++  l++lr++ Gl +++l+
  EPX73602.1 102 MMLYIDKATLSYSSVLGLFGDTHITKDQYNNLSTIFYVGYIIGQIPGHLLLQRFPVGKFVAISTALWTLIiFLHCT-AYNYGGLMALRFFLGLVESSLL 199
                 6777888888888888889999************************************888888888888455555.488889**************** PP

       MFS_1 104 pagaaliadwfpke.....ergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpeepperkrkspkeee......... 188
                 p++ a +   fp+e     +  ++i++++  + +G+i   ++  +  +   W + ++i++++++++ + +l++++ ++p+++r+ +k e+         
  EPX73602.1 200 PTMEATLGMFFPHEelvylQPIFYISCYGCNIPAGFIAY-GVQYATHTVPPWKLFMIIVGGITFFMTI-WLFFYYPDNPTKARFLTKNERlytidrvrk 296
                 *************95666666788888888888887555.88888888888***************99.5577777777777777777777***99888 PP

       MFS_1 189 ...kgtgpaplvp.awkallkdpvlwillialllfffgfsglltllplylqevlglsglllaglllallalvgailallagrlsdrlgr.....rrrll 278
                    +g + +++++   ++ lk pv w++ ++++++ ++++++++   l   + lg s+ l ++l++ + +  ++++++la++++  + +        ++
  EPX73602.1 297 nnkSGIESKKFKKyQVTEALKEPVTWLFALHVFTNQLANNLAYQQNLL--FTSLGVSN-LNSTLVSVANSGYNCVSSILATYFMSLIVNqsgfhGALWY 392
                 776444444444466778888899999999999998888885555555..47888884.6677677777777777777777777664443433344555 PP

       MFS_1 279 lallllllaalglallavtssavllllvlvl..iGfglgfvfpsllalasdlappeeagtasglfntagslgga 350
                 + +l++ +a++ + +   +     l+++++   +G+ + +  + + a ++ ++ +  +g ++ ++   ++++ +
  EPX73602.1 393 IPCLAGGIASVTIPWSHKI---GELAAIIIAtnFGIPFIISLGWMSATCAGYTKKLTRGVMFMIA---YAVANI 460
                 5555555555555555555...3322222221233333333333333333333333344333333...334444 PP

>> PspB  Phage shock protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.1       1.3   1.2e+04      23      43 ..      65      85 ..      58      86 .. 0.71
   2 ?   12.6   0.1   1.2e-05      0.11       5      40 ..     252     287 ..     250     298 .. 0.89
   3 ?   -2.9   0.0      0.83   7.4e+03      15      35 ..     493     513 ..     484     520 .. 0.61

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 1.3
        PspB 23 LHYrskkkrskglsaedekrL 43
                + Y++  k+ + ls+ +ek+L
  EPX73602.1 65 FKYMKEAKELEPLSHRQEKKL 85
                567777777777777777666 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 1.2e-05
        PspB   5 lavpliifvlfVapiWLiLHYrskkkrskglsaede 40 
                 l+++++  ++f + iWL+++Y     +++ l+++++
  EPX73602.1 252 LFMIIVGGITFFMTIWLFFYYPDNPTKARFLTKNER 287
                 788899999**************9999999999885 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 0.83
        PspB  15 fVapiWLiLHYrskkkrskgl 35 
                 ++++ W++   ++k+++ ++ 
  EPX73602.1 493 LLIIRWILVRQNKKRQALREQ 513
                 555667776655555544443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (557 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       846  (0.0471861); expected 358.6 (0.02)
Passed bias filter:                      426  (0.0237604); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 3925.85
//
Query:       EPX73603.1  [L=416]
Description: sulfonate dioxygenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.5e-39  134.3   1.0    8.7e-39  133.9   1.0    1.1  1  TauD      Taurine catabolism dioxygenase TauD, TfdA family


Domain annotation for each model (and alignments):
>> TauD  Taurine catabolism dioxygenase TauD, TfdA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.9   1.0   4.8e-43   8.7e-39       7     267 ..      46     397 ..      41     398 .. 0.89

  Alignments for each domain:
  == domain 1  score: 133.9 bits;  conditional E-value: 4.8e-43
        TauD   7 pk.....fgae..gvdlsdleslddelkeelrellaeygvvvfrgf.plspeqqlefarrfG................plygtpgrgtntkygevld.. 79 
                 ++     fga   g+dl++   +++e+++e+r ++ e++vv+f+++ +l p++q e++++f+                 ++ +p+  t +  ++v+   
  EPX73603.1  46 SHntdvsFGAVieGIDLRE---ITKEQFQEIRTAVFEHQVVCFPNQhNLPPQTQYEITHGFDpesstyghgnssnkqkNSILHPDLHTVPAVPQVQLig 141
                 4445667999988999999...999********************8366************99999999999999999999999999999999999999 PP

        TauD  80 ...vssvyesadianlayttll......................wHtDls.ylesppgiqlLhcleapa..........tG.......GetpfvDgraa 135
                     ++ + +   a+l++++++                      wH D++ y  +pp ++ L ++ +p           +G       G t+f++g+++
  EPX73603.1 142 hgvIQN-HYGLPEARLKHPHHRsfhrdpisveeehekqvtrfyrWHIDAAlYDYNPPVVTTLSAISVPRgtqtlryddkSGhempvplGSTAFASGYKM 239
                 995444.55666666688888899************************999****************777777776666669***************** PP

        TauD 136 ynaLpeelpellegltavrvyyhyrg................gglrteqelpavdkhprtghpvvrthpvltgrkallvn..ppfatri...eglgt.. 211
                 ++ L++e+++   + ++ + ++ y+                 g + ++ +lp++++ +++ +p+ +++pv tg++al+ +   + + +i   +g +t  
  EPX73603.1 240 FDLLSDEQKKTSARTRVQYFPHAYVAinkaralpnglsmyseGLEVPKDKLPDWEESKIKTFPLLWKNPV-TGKFALQTHgcCAEKIYIdhpDGSTTvi 337
                 ************9999999999999999*************99999***********************8.*********6524444444224444488 PP

        TauD 212 peskelldaleelled...peftyrfqwqeGdlvifdNrrvlHgrt.afdegeeRhllrc 267
                 ++ +++ + l+ ++++   pe +y ++w+eGd+vif+Nr++ H+ t a+++++ R +++c
  EPX73603.1 338 DDLAKVREILYNYQRPginPERVYCHDWKEGDFVIFNNRGLIHCITgAYNDNQTRVFHQC 397
                 9999**********99**89*****************************99999***998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (416 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       502  (0.0279993); expected 358.6 (0.02)
Passed bias filter:                      457  (0.0254894); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 2887.40
//
Query:       EPX73604.1  [L=236]
Description: hydantoin racemase family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      6e-14   52.4   0.1    7.2e-14   52.2   0.1    1.1  1  Asp_Glu_race  Asp/Glu/Hydantoin racemase
  ------ inclusion threshold ------
      0.025   14.5   0.0      0.064   13.2   0.0    1.7  1  SAM_LFY       Floricaula / Leafy protein SAM domain
       0.17   11.9   0.0       0.31   11.1   0.0    1.3  1  MOEP19        KH-like RNA-binding domain


Domain annotation for each model (and alignments):
>> Asp_Glu_race  Asp/Glu/Hydantoin racemase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.2   0.1   1.2e-17   7.2e-14       3     223 ..       6     217 ..       4     218 .. 0.75

  Alignments for each domain:
  == domain 1  score: 52.2 bits;  conditional E-value: 1.2e-17
                   ECSCCCCHHHHHHHHHHBTTSSGGG.S..EEEEE-CCS-TCHHHHHCH.T..THH.HHHHHHHHHHCTTESEEEE--CHHHHHHHHHHHH-SSEEEE CS
  Asp_Glu_race   3 gmgpeatlsvlrklveatpaesdqe.hlplivlndsaipdrteaieeesgddpvl.klleaakkLekagadaiviaCnTahavadelqkkikiPvlg 97 
                   +++p+++  ++++l+e++p+    +  l+++++  + +  ++++i    ++  ++    +++      g+da+v+aC +++ ++d +++  ++P  g
    EPX73604.1   6 VINPNSSHFITNSLQEKLPKLVAPDvTLRFFTCPAPGAA-VIDSIT---EATLTAsLVFQSLTPEILEGIDAVVVACYSPTPLVDMVRESYQLPCMG 98 
                   678888888888888888888866544444444444433.334442...2212221333333333447***************************** PP

                   CHHHHHHHHHHHSS-EEEEEE-HHHHHCTHHHHHHHHHGT.EEE....T-CCCHHCCHCHHHHTT-TTSH.HHHHHHHHHHHHH.TTT-SEEEE-ST CS
  Asp_Glu_race  98 iveataealkatgvkkvglLgTrgtlksglyqkeleanqgievvvpseelqssvnqaiyeelkaGevtee.arrailkllerla.ergadaviLGCT 192
                   iv+a+a a+     +kvg+L+ ++  ++ ly+  +++ +g+     +++++  + ++ ++ l  +++++e  ++ +++  ++l  ++gad + LG  
    EPX73604.1  99 IVQASALAALT-VGQKVGVLTSTFRSECLLYE-LFQS-FGL-----QRSRIAAIASTGRTVLQLSNMDPEeRKSLLVQRAQELVrDHGADSICLGGA 187
                   *****999977.7899*****88887777775.5688.8*9.....555555665444455559999999566666666678888************ PP

                   THHHHHHHHHHCC-TT.SEEEEHHHHHHHHH CS
  Asp_Glu_race 193 elplllekaealekeksvpvidptdilaret 223
                    l  + ++++++ + + +p+id +++ ++++
    EPX73604.1 188 ALAAIRDSIQEAVGPE-IPIIDGVHAAVEQL 217
                   *************995.***********986 PP

>> SAM_LFY  Floricaula / Leafy protein SAM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.1e-05     0.064       6      44 ..     127     165 ..     122     175 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.1e-05
     SAM_LFY   6 leelfeayGvryltvakiaelGftvstlvnmkeeelddm 44 
                 l elf+++G++   +a ia  G tv  l nm  ee   +
  EPX73604.1 127 LYELFQSFGLQRSRIAAIASTGRTVLQLSNMDPEERKSL 165
                 789****************************99997655 PP

>> MOEP19  KH-like RNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   5.1e-05      0.31      28      60 ..     134     166 ..     120     175 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 5.1e-05
      MOEP19  28 FGpdgeripeiEqvsqtllevkaldseglaeil 60 
                 FG +++ri  i  + +t+l+++++d+e++   l
  EPX73604.1 134 FGLQRSRIAAIASTGRTVLQLSNMDPEERKSLL 166
                 9*************************9876555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (236 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       398  (0.0221987); expected 358.6 (0.02)
Passed bias filter:                      369  (0.0205812); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1781.81
//
Query:       EPX73605.1  [L=192]
Description: thioredoxin peroxidase Tpx1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-37  128.4   0.0    1.8e-37  128.0   0.0    1.1  1  AhpC-TSA    AhpC/TSA family
    1.3e-17   63.9   0.0    1.6e-17   63.6   0.0    1.1  1  Redoxin     Redoxin
    1.1e-09   38.0   0.0    2.1e-09   37.0   0.0    1.5  1  1-cysPrx_C  C-terminal domain of 1-Cys peroxiredoxin


Domain annotation for each model (and alignments):
>> AhpC-TSA  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.0   0.0   2.9e-41   1.8e-37       1     123 [.       5     137 ..       5     138 .. 0.99

  Alignments for each domain:
  == domain 1  score: 128.0 bits;  conditional E-value: 2.9e-41
                 TTSB----EEE...STTCEEEECHHHTTSEEEEEEESTST-CCHHHHHHHHHHCHHHCCCTTEEEEEEESSSCHHHHHHHHH-H........SSEEEE- CS
    AhpC-TSA   1 vgdkapdfelk...nadgetvslsdykgkpvvlffypkdwcpvCttelpalaklyeefkergvevigvsvdspeshkkfiekes.......lnfpllsD 89 
                 +g++apdf+++   n+ +e++sls+ykgk+v l fyp d+++vC+te+ a+++++ +f+erg+evi  s+ds++sh +fi++ +       +++pllsD
  EPX73605.1   5 IGQPAPDFKGTavvNGAFEEISLSQYKGKWVFLGFYPLDFTFVCPTEIVAFSEAAGKFAERGAEVILASTDSEYSHLAFINTPRkdgglggIKIPLLSD 103
                 8**********99999*******************************************************************9*************** PP

                 TTSHHHHHTT-EETTTTECSCEEEEE-TTSBEEE CS
    AhpC-TSA  90 eegkvakaygvlkeekglalratfvidkegkiry 123
                  ++k++++ygvl e++g+a r+ f+id++g++r+
  EPX73605.1 104 ANHKISRDYGVLIEDAGVAFRGLFLIDPNGVLRQ 137
                 *******************************997 PP

>> Redoxin  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.6   0.0   2.7e-21   1.6e-17       3     138 ..       6     146 ..       4     154 .. 0.91

  Alignments for each domain:
  == domain 1  score: 63.6 bits;  conditional E-value: 2.7e-21
                 TSBB---E.CCEETTCEEEEEHHHHTTSEEEEEEESTTT-HHHHHTHHHHHTHHHHHHCSTTTEEEEEESSSHHHHHHHHH.......TT-TSEEEE-T CS
     Redoxin   3 gdkaPdft.lplaatdgnsvslsefkgkkvvvnfvpgafcPtCsaehpyleklaellkekgvdvvavvadndafvkefwgk.......eglkfpvlsDg 93 
                 g++aPdf+ ++ ++   +++sls++kgk v++ f+p  f+ +C +e++++ + a +++e+g +v+  ++d++    +f++         g+k+p+lsD+
  EPX73605.1   6 GQPAPDFKgTAVVNGAFEEISLSQYKGKWVFLGFYPLDFTFVCPTEIVAFSEAAGKFAERGAEVILASTDSEYSHLAFINTprkdgglGGIKIPLLSDA 104
                 89******85567899************************************************999999999999999999999************** PP

                 TSHHHHHTT-TTEEE.GGGEEE-EEEEEEETTEEEEEEESSSCHT CS
     Redoxin  94 saaftkalGlrleedaseglrtpryavidedgkvvylevepepet 138
                 ++++++++G+ +e    +g++ + +++id +g+++++   + p++
  EPX73605.1 105 NHKISRDYGVLIED---AGVAFRGLFLIDPNGVLRQITINDLPVG 146
                 *********88763...468***************9998888765 PP

>> 1-cysPrx_C  C-terminal domain of 1-Cys peroxiredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.0   0.0   3.6e-13   2.1e-09       1      23 [.     158     180 ..     158     188 .. 0.92

  Alignments for each domain:
  == domain 1  score: 37.0 bits;  conditional E-value: 3.6e-13
                 HHHHHHHHT-BB-TTT.TBT-EE CS
  1-cysPrx_C   1 ALQladkhgvatPAnWkpGdkvi 23 
                 A+Q++++hg+++PAnW++G + i
  EPX73605.1 158 AFQFVEEHGEVCPANWQKGADSI 180
                 9******************9999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       243  (0.0135535); expected 358.6 (0.02)
Passed bias filter:                      240  (0.0133861); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1483.92
//
Query:       EPX73606.1  [L=72]
Description: Sm domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-07   31.5   0.0    1.1e-07   31.4   0.0    1.0  1  LSM       LSM domain
  ------ inclusion threshold ------
      0.012   15.1   0.0      0.013   15.1   0.0    1.0  1  Gemin6    Gemin6 protein


Domain annotation for each model (and alignments):
>> LSM  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4   0.0   1.3e-11   1.1e-07       3      66 ..       8      69 ..       6      70 .. 0.92

  Alignments for each domain:
  == domain 1  score: 31.4 bits;  conditional E-value: 1.3e-11
                HHHTTTSEEEEEETTSEEEEEEEEEEETTSEEEEEEEEEEETTETEEEEEEEEEEEGGGEEEEE CS
         LSM  3 lkklinkkvtvelkngrelrGtLkgfDqfmNlvLedveetlkdkkekrklglvliRGnnivlis 66
                l+  +n++v+ve  + r++ G++++ D    ++L++++e +++   +r+lglv+i G +i + s
  EPX73606.1  8 LQCWLNRQVRVEVSDHRKFYGCFICTDHEGTAILSNTTEDSNG--LTRVLGLVVIPGKHIKSFS 69
                56678**********************************8877..7**************9876 PP

>> Gemin6  Gemin6 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   0.0   1.4e-06     0.013       6      62 ..       2      57 ..       1      69 [. 0.79

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.4e-06
      Gemin6  6 dksllefedyvekevkvllse.keikGwlltvdpvsksvvlvnfledGalsvsvvlGh 62
                d   ++ + + +++v+v +s+ +++ G  +++d      +l+n +ed     + vlG 
  EPX73606.1  2 DSGKQQLQCWLNRQVRVEVSDhRKFYGCFICTDHEGT-AILSNTTEDS-NGLTRVLGL 57
                556677788999*********9***********8765.679*****75.456666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       380  (0.0211947); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.27s 00:00:00.62 Elapsed: 00:00:00.41
# Mc/sec: 532.10
//
Query:       EPX73607.1  [L=269]
Description: eukaryotic protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-48  165.5  28.2    1.6e-48  165.3  28.2    1.0  1  Bax1-I    Inhibitor of apoptosis-promoting Bax1


Domain annotation for each model (and alignments):
>> Bax1-I  Inhibitor of apoptosis-promoting Bax1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.3  28.2   9.1e-53   1.6e-48       2     206 ..      61     260 ..      60     261 .. 0.91

  Alignments for each domain:
  == domain 1  score: 165.3 bits;  conditional E-value: 9.1e-53
      Bax1-I   2 aflrkvYgllalgllltalvaavvlsspa.qlflslhivlflvvilaplalvflslsaarlkkkssalalallllftlleGlslspillvytgaiilqa 99 
                 aflrkvY++l+++l +tal++ +++  p+ +l++++h++ +lv ++++l+++f+++++    +++ +  +++l++ft+leGl+l++ ++++++ iil+a
  EPX73607.1  61 AFLRKVYAILSAQLFVTALFGGIFYLEPTlSLWVKNHPWFLLVNFFVSLGVLFGLILK-P-YSYPRN--YIFLFTFTALEGLTLGTAISFFSARIILEA 155
                 79***************6666666555556***********************66554.3.346777..****************************** PP

      Bax1-I 100 flltaaifgglslyalttkrdlsglggflfagligliiaslvnlFlp.ssalelaisylgvllfsglilyDtqkiierageygeedailaalsLyldfi 197
                 +++t++if++l++++++ k+d+s+lggfl++ l++l+++ lv++F+p +++ ela+  +g+l+f+g+ilyDt++i++r+ +++e   i+ +l+Lyldfi
  EPX73607.1 156 VFITLGIFVALTAFTFQSKYDFSRLGGFLYISLWTLVLSPLVFMFMPsMPLAELAFAGFGTLVFCGYILYDTHNILHRY-SPEE--FIMSSLMLYLDFI 251
                 ***********************************************999999***********************975.5555..5************ PP

      Bax1-I 198 nlFlslLri 206
                 nlF+++L+i
  EPX73607.1 252 NLFVRVLQI 260
                 ********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (269 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       556  (0.0310112); expected 358.6 (0.02)
Passed bias filter:                      219  (0.0122148); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.33s 00:00:00.92 Elapsed: 00:00:00.55
# Mc/sec: 1478.68
//
Query:       EPX73608.1  [L=1003]
Description: nuclear export factor Sac3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   9.9e-112  373.1   4.2   2.5e-111  371.7   4.2    1.7  1  SAC3_GANP        SAC3/GANP family
    1.5e-07   31.4   0.2    2.1e-06   27.8   0.0    2.6  2  CSN8_PSD8_EIF3K  CSN8/PSMD8/EIF3K family
    0.00024   20.6   1.0    0.00059   19.3   1.0    1.7  1  PAM2             Ataxin-2 C-terminal region
  ------ inclusion threshold ------
          2    8.0   8.8       0.34   10.5   2.1    2.5  2  DUF5526          Family of unknown function (DUF5526)


Domain annotation for each model (and alignments):
>> SAC3_GANP  SAC3/GANP family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  371.7   4.2  5.6e-115  2.5e-111       1     292 [.     106     412 ..     106     413 .. 0.99

  Alignments for each domain:
  == domain 1  score: 371.7 bits;  conditional E-value: 5.6e-115
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----HHHHHHHHHHHHHHTG..G..GTTTCHHHHHHHHHHHHH CS
   SAC3_GANP   1 GtCedmCPekEraeRevqkdlsrfEkekkktkkvdpskaVKeysRsaagqeeplpsdlRppevLkkTldYLlkeildreeeelaevydFiwDRtRaiRq 99 
                 GtC+dmCPe+Er++Re+q++l+r+E  +++t++vd+++aVK+++R+aag+e+ lpsd+Rpp+vLkk+ldYL+++i+  +  +l+ ++ F++DRtR+iRq
  EPX73608.1 106 GTCQDMCPEYEREQREYQNNLERWEI-NPETGRVDKNLAVKAFHRPAAGNEQALPSDVRPPPVLKKSLDYLIDKIVCGP-YPLEATHFFVRDRTRSIRQ 202
                 9************************7.999**********************************************777.7****************** PP

                 HHHHTT--SHHHHHHHHHHHHHHHHHHHHHHHTTS.---CHHHHHHHHHHHHHHHHHHHHHH...---TTHHHHHHHHHHHTTT-HHHHHHHCTS-HHH CS
   SAC3_GANP 100 DltiqnlskaeaveilerivrfhilslhrlceepessfdeqqnleqLqkclqsLlelYddlrkkkeelpneaefrayylLlnlrdpdilrevqelpsei 198
                 D+t+qn ++ eav+++eri+r+hil+lh+lce++  +f++qq+ eqL+k+lqsL e+Yddlrk+++++pneaefr+y+++++lrd+d++r+ q lp + 
  EPX73608.1 203 DFTLQNNRGLEAVACHERIARYHILCLHQLCEKK--NFSSQQEVEQLRKVLQSLCEFYDDLRKEGISCPNEAEFRSYSIITHLRDQDVVRQSQILPIDT 299
                 ********************************99..8*************************999********************************** PP

                 HTSHHHHHHHHHHHHH--TT.................HHHHHHHHT..TS-HHHHHHHGGGHHHHHHHHHHHHHHHS-TT---EEHHHHHHHTT-SSHH CS
   SAC3_GANP 199 lkspevqlalklvaalqenn.................yvrffklvk..evsylqacllerhfnevRrkalkalsraykskskkvpleeLaelLlfddee 278
                 +++p++ql l+l+a++q+nn                 y+rffklvk  +v+yl+aclle+hf+++R+ a+ka+++ay s + k+p+ +L+++L fd+ +
  EPX73608.1 300 FNDPRMQLSLRLSALAQKNNerighllplnteatpnlYTRFFKLVKssSVTYLMACLLESHFTSIRKGAIKAMRKAYMSVHAKFPCIDLQRILQFDTIN 398
                 *****************************************************************************99******************** PP

                 HHHHHHHHTT--EE CS
   SAC3_GANP 279 eaeefceayglevs 292
                 ++ +fce+y+lev+
  EPX73608.1 399 NVLDFCEYYSLEVY 412
                 ***********996 PP

>> CSN8_PSD8_EIF3K  CSN8/PSMD8/EIF3K family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.0   4.6e-10   2.1e-06      25     130 ..     307     416 ..     295     426 .. 0.81
   2 ?    0.0   0.1      0.17   7.7e+02      62      94 ..     640     672 ..     627     674 .. 0.82

  Alignments for each domain:
  == domain 1  score: 27.8 bits;  conditional E-value: 4.6e-10
  CSN8_PSD8_EIF3K  25 lllkrlpaaiqqsdeeiqklltLetlLeeanyakfwstlksddlsadltadvagleelvReeiaklvgkaYesIsad....vlaelLglssdee 114
                      l+l+ l a  q+++e i +ll L+t    + y++f++++ks +    +    ++  +++R+ ++k ++kaY s +a+    +l+++L++++ + 
       EPX73608.1 307 LSLR-LSALAQKNNERIGHLLPLNTEATPNLYTRFFKLVKSSSVTYLMACLLESHFTSIRKGAIKAMRKAYMSVHAKfpciDLQRILQFDTINN 399
                      5555.556666778***************************9777777777777799**************88888766669********9999 PP

  CSN8_PSD8_EIF3K 115 lekfvkevgWel.daat 130
                      + +f++ ++ e+ ++++
       EPX73608.1 400 VLDFCEYYSLEVyEENG 416
                      99999988888754443 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.17
  CSN8_PSD8_EIF3K  62 tlksddlsadltadvagleelvReeiaklvgka 94 
                      ++ ++ + a+ +  ++ l+e+ +ee+ k v ++
       EPX73608.1 640 LIAQQCWLAKRKREIQRLKEQQQEEHYKAVLSS 672
                      46677899999999***********99998765 PP

>> PAM2  Ataxin-2 C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   1.0   1.3e-07   0.00059       5      18 .]     502     515 ..     499     515 .. 0.92

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 1.3e-07
                 -SSTTSS----TT- CS
        PAM2   5 kLNPnAkEFVPsfk 18 
                 kLN+nA+ FVPsf+
  EPX73608.1 502 KLNVNAPSFVPSFS 515
                 9***********96 PP

>> DUF5526  Family of unknown function (DUF5526)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   2.1   7.5e-05      0.34      78     147 ..      28     100 ..      11     124 .. 0.65
   2 ?    0.3   0.6     0.099   4.4e+02     112     130 ..     647     665 ..     614     674 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 7.5e-05
     DUF5526  78 tssqsfqleksksedilaealkiqeseekekylqk...akkrdeilqLLrkQReeRiskElislpykpkakve 147
                 ++++s+++ +s + d  + +  +  +e ++k+      +++ +e+  L  k Re+ i+k li  p kp++  e
  EPX73608.1  28 SQKESNKDVSSVEDDECTTTEDVDAQETRQKRFTStlqGNRFEELRSLRDKEREDAIQKGLIDDPSKPRQLDE 100
                 22222222223334444555556666666666554343555566666777******************99766 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.099
     DUF5526 112 kakkrdeilqLLrkQReeR 130
                  ak+++ei+ L  +Q ee 
  EPX73608.1 647 LAKRKREIQRLKEQQQEEH 665
                 499999*999999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1003 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1035  (0.0577277); expected 358.6 (0.02)
Passed bias filter:                      543  (0.0302861); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.76u 0.32s 00:00:01.08 Elapsed: 00:00:00.48
# Mc/sec: 6342.51
//
Query:       EPX73609.1  [L=449]
Description: tyrosine-tRNA ligase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.1e-73  247.2   0.0    2.8e-73  246.8   0.0    1.1  1  tRNA-synt_1b  tRNA synthetases class I (W and Y)
  ------ inclusion threshold ------
      0.013   15.2   0.0      0.027   14.2   0.0    1.5  1  S4            S4 domain


Domain annotation for each model (and alignments):
>> tRNA-synt_1b  tRNA synthetases class I (W and Y)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  246.8   0.0   3.1e-77   2.8e-73       8     290 ..      32     341 ..      28     344 .. 0.92

  Alignments for each domain:
  == domain 1  score: 246.8 bits;  conditional E-value: 3.1e-77
                   EEEEEETSSS.-BGGGHHHHHHHHHHHHTTSEEEEEEEHHHHHTTTTT.-SSHHHHHHHHHHHHHH..HHHHHHHTCHTTT................ CS
  tRNA-synt_1b   8 vysGidPTgk.lHlGylvplkklvelqkaghevffliaDlhAiigdps.kaeerklrkreevlena..ikaqlakgldpek................ 84 
                   +ysG+dPT+  lH+G+lv+l++l++l+ +g+ v+ li+D++ ++gdps +++ r  +k++ +  n   i++q+  +  pek                
    EPX73609.1  32 AYSGVDPTAGsLHVGNLVALMPLIHLYLHGIPVYSLIGDATVQLGDPSgRTTGRHELKQDVRNRNKenIEKQI--LSLPEKvityakdcqykcegad 126
                   7********99*************************************9988887666666666664545444..333455666777********** PP

                   .....EEEEETHHHHTTHHHHHHHHHHHTTCBHHHHHHHHHCCHHCSSSC--BHHHHHHHHHHHHHHHHTCHS....EEEEEGGGHHHHHHHHHHHH CS
  tRNA-synt_1b  85 .....aevvlqsewlehlelaellrdlgklgslnrmlqfksvkkrleegegislgeftYplLqaaDilllkad....lvpgGsDQkqnielgrdlar 172
                         ++v + +w+++++l+++l+++g+  ++++ml+++sv++rl++++gis++e+tY+lLqa+D+l+l+++    l++gGsDQ++ni++g dl+r
    EPX73609.1 127 aspltWNIVHNLDWYKNMNLLTFLNEVGRQARVSQMLARDSVTSRLQSSSGISFSELTYQLLQAYDFLHLYKNhkvnLQIGGSDQWGNITAGTDLIR 223
                   9998888*****************************************88*********************************************** PP

                   HHHHH.STTSS-EEEEET-BBSTTSSSBTTCETTCGC-BTTCCHHHHHHHHHHCHCSTTCSHHHHHHHHHTHHHCHHHHHHHHCCSEE.ESSHHHHH CS
  tRNA-synt_1b 173 rfnkk.evfkkpegltvplltgldGekKmSKSagnsaIfLddekesvkkkiqkavtdsdeevekllklktelsnelierleavsgkkp.kreaeell 267
                   rf  k  +  ++++lt+pllt ++G+ K++KSagn aI+Ld++ ++ ++++q++++ +d+   k+l ++t ls e +e ++  + ++   r +++ l
    EPX73609.1 224 RFYPKsMTKSPVYALTTPLLTTANGQ-KFGKSAGN-AIWLDPSLTDSYSLYQSFISLPDDIASKYLDMLTLLSSEDLESIKSKHFQNSsSRFIQHSL 318
                   ****9666677899************.********.******************************************999999998889******* PP

                   HHHHCCCCHHHHHHHHHHHHHHH CS
  tRNA-synt_1b 268 aeevtklvhggdlkkalaealne 290
                   a++v+++vhg++ +k ++ +++ 
    EPX73609.1 319 AFNVVHMVHGKESAKLAQLQTEL 341
                   ****************9998875 PP

>> S4  S4 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0     3e-06     0.027       6      46 ..     392     432 ..     390     433 .. 0.94

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3e-06
                 HHHHTTSSSSHHHHHHHHHTTTEEETTEEE--TT-EE-TTC CS
          S4   6 vlarlglassrreArqlIehGrVlVNGkvvkdpsyrVkpgD 46 
                 +l +lg+ +sr+eA + I+ G + + ++ v dp+ +++  D
  EPX73609.1 392 LLRELGIYISRKEASEHIRSGAISLAHETVVDPNIILTHKD 432
                 6899******************************9999877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (449 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       416  (0.0232026); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 3234.03
//
Query:       EPX73610.1  [L=190]
Description: coatomer zeta subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.5e-13   48.6   0.1      1e-12   48.2   0.1    1.1  1  Clat_adaptor_s   Clathrin adaptor complex small chain
  ------ inclusion threshold ------
      0.012   15.6   0.0        0.2   11.6   0.0    2.0  2  AP-5_subunit_s1  AP-5 complex subunit sigma-1


Domain annotation for each model (and alignments):
>> Clat_adaptor_s  Clathrin adaptor complex small chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.2   0.1   1.1e-16     1e-12       2     136 ..       8     151 ..       7     155 .. 0.89

  Alignments for each domain:
  == domain 1  score: 48.2 bits;  conditional E-value: 1.1e-16
                     EEEEEEE-TTS-EEEEEES.SSS-CHHHHHHHHHHHHHHHTT-SSS.......-SEEEETTEEEEEEEETTEEEEEEEETTS-HHHHHHHHHHHH CS
  Clat_adaptor_s   2 ikaililnkkgkvrlakfy.tavddkkkqklieevyelvsaRdskl.......sniveledlkviYkryasLYFvvivdeqeneliilelihlfv 88 
                     ++a lil+  gk+ +ak+y  + +++ +  +++ v e ++  +  +       ++i+ +++  v+    +++ F+++   +ene+++ e ++   
      EPX73610.1   8 VNAFLILDSTGKRVFAKYYsPPHSKEGEGSIFQSVKEEKTFEKGLFektwktqNDILTYDGKLVVMLTVMDVAFYIVGGMEENEIMLYECLRSIR 102
                     7899***************55666666789999999999888665578888888899999999999***************************** PP

                     HHHHHHCTS-.SHHHHHHCHHHHHHHHHCCEETTEES---HHHHHHCHH CS
  Clat_adaptor_s  89 esLdkyfgnV.celdlvfnfekvylildEivsgGeiletskkevlkrve 136
                     ++L+ +++ +  ++ ++ n++++  ++dE ++ G ile++++ +  rv+
      EPX73610.1 103 DALELIYKYIpDKRTILDNYDQLVIVVDETIDDGIILESEPSIIASRVT 151
                     ********7736899*************************999988886 PP

>> AP-5_subunit_s1  AP-5 complex subunit sigma-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0     0.018   1.6e+02       2      49 ..       8      51 ..       7      66 .. 0.79
   2 ?   11.6   0.0   2.2e-05       0.2     108     172 ..      69     133 ..      60     139 .. 0.89

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.018
  AP-5_subunit_s1  2 Vlaflihtvesekesrvlysrvfgaeekdeseeereeadeeerllrke 49
                     V afli++     + + ++++++++ +++e e +  ++ +ee+++ k+
       EPX73610.1  8 VNAFLILDS----TGKRVFAKYYSPPHSKEGEGSIFQSVKEEKTFEKG 51
                     789999983....44557999999999999999988998888888774 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 2.2e-05
  AP-5_subunit_s1 108 kivlWlgvgslgftlvceahENlllaeqtLrtlirsllehlrllkqgsevllkadrveaiLkrfL 172
                      k v+ l+v +++f +v   +EN  +  + Lr++  +l    + +  +  +l+  d+  ++++  +
       EPX73610.1  69 KLVVMLTVMDVAFYIVGGMEENEIMLYECLRSIRDALELIYKYIPDKRTILDNYDQLVIVVDETI 133
                      78999***************************************999999999999988887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       458  (0.0255452); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.29s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1330.52
//
Query:       EPX73611.1  [L=253]
Description: 40S ribosomal protein S2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.7e-27   95.2   0.5    3.7e-27   94.1   0.5    1.6  1  Ribosomal_S5     Ribosomal protein S5, N-terminal domain
    1.5e-21   75.6   0.1    2.5e-21   74.9   0.1    1.4  1  Ribosomal_S5_C   Ribosomal protein S5, C-terminal domain
  ------ inclusion threshold ------
       0.62   10.6   7.1        1.3    9.7   7.1    1.5  1  FoP_duplication  C-terminal duplication domain of Friend of P


Domain annotation for each model (and alignments):
>> Ribosomal_S5  Ribosomal protein S5, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.1   0.5   6.2e-31   3.7e-27       1      65 []      75     139 ..      75     139 .. 0.98

  Alignments for each domain:
  == domain 1  score: 94.1 bits;  conditional E-value: 6.2e-31
                   XEEEEEEEEEEEEEETTEEEEEEEEEEEEEETTTEEEEEEEEESSHHHHHHHHHHHHHHTEEE-- CS
  Ribosomal_S5   1 lkekvlkikrvqkvtkgGrrtsfsalvvvGdgnGlvGlGvgkakevatAirkAiekAkknlvpvp 65 
                   l+++v+k+ +vqk+t++G+rt+f+a+vv+Gd +G+vGlG+++akevatAir+Ai++ k++++pv+
    EPX73611.1  75 LQDEVMKVCPVQKQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIMGKLSIMPVR 139
                   799************************************************************96 PP

>> Ribosomal_S5_C  Ribosomal protein S5, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.9   0.1   4.3e-25   2.5e-21       2      60 ..     159     218 ..     158     229 .. 0.92

  Alignments for each domain:
  == domain 1  score: 74.9 bits;  conditional E-value: 4.3e-25
                     EEETTEEEEEEE--TT--EES-HHHHHHHHHHT--SEE---BS.-SSHHHHHHHHHHHHH CS
  Ribosomal_S5_C   2 gkfgavkvllkpaprGtGiiaggavravlelaGikDvlakslg.srnpinvvkAtfeALk 60 
                     gk+g+v+v+l paprG G++a+++ +  l+laGi+D++++s+g +++++n+vkA+f A +
      EPX73611.1 159 GKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAGIQDCYTQSRGsTKTLGNFVKAAFAAAS 218
                     9******************************************99***********9966 PP

>> FoP_duplication  C-terminal duplication domain of Friend of PRMT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   7.1   0.00021       1.3      18      43 ..       4      29 ..       1      37 [. 0.76

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00021
  FoP_duplication 18 rgrgrggrggrggrgrgrggrggrkk 43
                     ++ ++ grggrggrgrgrg+rg +++
       EPX73611.1  4 TQARGFGRGGRGGRGRGRGRRGAKRD 29
                     66778889999999999999999333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (253 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       417  (0.0232584); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 1698.79
//
Query:       EPX73612.1  [L=118]
Description: 40S ribosomal protein S20 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.3e-29  100.1   0.9    6.3e-29  100.1   0.9    1.3  2  Ribosomal_S10  Ribosomal protein S10p/S20e


Domain annotation for each model (and alignments):
>> Ribosomal_S10  Ribosomal protein S10p/S20e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1      0.54   9.7e+03      55      64 ..       9      18 ..       3      19 .. 0.53
   2 !  100.1   0.9   3.5e-33   6.3e-29       1      98 []      21     115 ..      21     115 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 0.54
                   -EEEEEEEEE CS
  Ribosomal_S10 55 sreqfeirth 64
                    ++qf  ++h
     EPX73612.1  9 KEQQFTSTVH 18
                   3445766666 PP

  == domain 2  score: 100.1 bits;  conditional E-value: 3.5e-33
                    EEEEEESSHHHHHHHHHHHHHHTTSSS-EE---EEEEEEEEEEEEE--SS--.S--EEEEEEEEEEEEEEEE.E-HHHHHHHS-...S---SS-EE CS
  Ribosomal_S10   1 rirlkSydsklLekavkkivraakelgikvkgpvplPtkrkrvtvlksphvd.kksreqfeirthkRlidisdatketidtllkllqlnlpegVsv 95 
                    ri+l+S++ ++Lek+++++v+ ak+++++vkgpv+lPtk++++t++k+p ++ +k++e +e+r+hkRlid++ +++e ++++++   +++++gV+v
     EPX73612.1  21 RITLTSRHVRNLEKVCSDLVNRAKDKQLRVKGPVRLPTKTLKITTRKTPNGEgSKTWETYEMRIHKRLIDLH-SPSEIVKQITS---IHIEPGVEV 112
                    8**********************************************************************5.9999*******...********* PP

                    EEE CS
  Ribosomal_S10  96 evk 98 
                    ev+
     EPX73612.1 113 EVT 115
                    *96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       685  (0.0382063); expected 358.6 (0.02)
Passed bias filter:                      465  (0.0259356); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 867.99
//
Query:       EPX73613.1  [L=389]
Description: 19S proteasome regulatory subunit Rpt3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.1e-44  151.2   0.0    4.6e-44  150.0   0.0    1.6  1  AAA              ATPase family associated with various cellul
    5.1e-10   39.2   0.1    4.8e-09   36.0   0.0    2.5  2  Prot_ATP_ID_OB   Proteasomal ATPase OB C-terminal domain
      2e-08   34.8   0.2    1.7e-05   25.3   0.0    3.2  3  AAA_16           AAA ATPase domain
    6.7e-08   32.6   0.1    2.3e-07   30.9   0.1    1.9  1  AAA_5            AAA domain (dynein-related subfamily)
    3.4e-07   30.6   0.0      1e-06   29.0   0.0    1.8  1  AAA_2            AAA domain (Cdc48 subfamily)
      4e-06   26.2   0.0    6.4e-06   25.5   0.0    1.3  1  DUF815           Protein of unknown function (DUF815)
    1.8e-05   24.5   0.0    5.3e-05   23.0   0.0    1.7  1  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
      5e-05   23.6   0.2     0.0058   16.9   0.0    2.6  2  AAA_22           AAA domain
    0.00032   20.5   0.0     0.0011   18.7   0.0    1.9  1  AAA_30           AAA domain
    0.00035   20.2   0.0     0.0015   18.1   0.0    2.0  1  AAA_7            P-loop containing dynein motor region
    0.00063   19.6   0.0     0.0036   17.2   0.0    2.2  2  AAA_3            ATPase family associated with various cellul
    0.00071   19.9   0.0     0.0014   18.9   0.0    1.6  1  AAA_28           AAA domain
     0.0011   18.8   0.0     0.0033   17.2   0.0    1.9  1  AAA_lid_3        AAA+ lid domain
     0.0016   18.8   0.0     0.0031   17.9   0.0    1.4  1  RNA_helicase     RNA helicase
     0.0019   18.1   0.0     0.0065   16.4   0.0    1.9  2  NTPase_1         NTPase
     0.0028   17.6   0.0     0.0047   16.9   0.0    1.4  1  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
      0.003   16.8   0.0      0.008   15.4   0.0    1.6  2  TIP49            TIP49 P-loop domain
     0.0038   17.2   0.0     0.0093   16.0   0.0    1.6  1  AAA_14           AAA domain
     0.0041   17.7   0.0       0.01   16.4   0.0    1.8  1  AAA_18           AAA domain
     0.0054   16.1   0.1      0.016   14.6   0.0    1.7  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
      0.007   16.3   0.0      0.079   12.9   0.0    2.5  2  NACHT            NACHT domain
     0.0083   15.2   0.0      0.019   14.0   0.0    1.6  1  T2SSE            Type II/IV secretion system protein
  ------ inclusion threshold ------
      0.015   14.7   0.0       0.54    9.6   0.0    2.3  2  TniB             Bacterial TniB protein
      0.016   14.9   0.0      0.068   12.9   0.0    2.0  2  IstB_IS21        IstB-like ATP binding protein
      0.021   14.5   0.1      0.043   13.5   0.1    1.6  1  AAA_24           AAA domain
      0.027   14.3   0.0      0.043   13.6   0.0    1.4  1  AAA_11           AAA domain
       0.03   14.1   0.0      0.053   13.4   0.0    1.4  1  Bac_DnaA         Bacterial dnaA  protein
      0.041   14.1   0.0      0.091   12.9   0.0    1.7  1  AAA_33           AAA domain
      0.043   13.4   0.5       0.25   10.9   0.5    2.1  2  AAA_25           AAA domain
      0.044   13.7   0.1       0.32   10.9   0.0    2.1  2  ATPase_2         ATPase domain predominantly from Archaea
       0.05   12.5   0.0      0.071   12.0   0.0    1.3  1  AFG1_ATPase      AFG1-like ATPase
      0.086   13.2   0.1       0.25   11.7   0.0    1.7  1  AAA_19           AAA domain
      0.095   12.4   0.1        1.4    8.6   0.0    2.7  3  Sigma54_activat  Sigma-54 interaction domain
        0.1   11.9   0.0       0.19   11.0   0.0    1.3  1  Zeta_toxin       Zeta toxin
       0.11   11.8   0.4          1    8.6   0.0    2.4  3  ATPase           KaiC
       0.14   11.2   0.0       0.25   10.4   0.0    1.2  1  Parvo_NS1        Parvovirus non-structural protein NS1
       0.15   12.6   0.1       0.64   10.5   0.0    2.3  2  ABC_tran         ABC transporter
       0.15   11.6   0.0        0.4   10.3   0.0    1.8  1  cobW             CobW/HypB/UreG, nucleotide-binding domain


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.0   0.0   9.8e-47   4.6e-44       1     131 [.     171     303 ..     171     304 .. 0.97

  Alignments for each domain:
  == domain 1  score: 150.0 bits;  conditional E-value: 9.8e-47
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHH...TTCCCHHHHHHHHHHHHHHHHT CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr...sgseseeeervvnqLlteldgv 96 
                 vllyGppGtGKT+l+kava++++++f+++ gse+++ky+ge+++ +r++f+ a+e+a p ++fiDEida+a++r   ++++++e +r++ +Llt++dg+
  EPX73613.1 171 VLLYGPPGTGKTMLVKAVANSVNANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENA-PAVIFIDEIDAIATKRfdaQTGADREVQRILIELLTQMDGF 268
                 79******************************************************9.****************99888899999************** PP

                 TTSSSTEEEEEEESSGGGSTHHHHS.TTSSEEEETT CS
         AAA  97 kkkeskvivigatnrpdkldpallr.gRfdrkieie 131
                 ++  ++v v++atnr d+ldpallr gR+drkie++
  EPX73613.1 269 DQG-ANVKVMMATNRADTLDPALLRpGRLDRKIEFP 303
                 **5.77***************************997 PP

>> Prot_ATP_ID_OB  Proteasomal ATPase OB C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.0   0.0     1e-11   4.8e-09       1      57 []      58     113 ..      58     113 .. 0.97
   2 ?   -0.4   0.0       2.4   1.1e+03      27      41 ..     281     295 ..     273     296 .. 0.84

  Alignments for each domain:
  == domain 1  score: 36.0 bits;  conditional E-value: 1e-11
                     EEEEEEE-TTSSEEEEE-TTS-EEEEEE-GGGSSST--TTEEEEEETTTTEEEEEE- CS
  Prot_ATP_ID_OB   1 VatVsEvlddteraiVktssdeevvvslagavpremLrpgDlVavdkdtgfifEkLP 57 
                     +++  E +d  + aiV ++++ ++vv++ + ++re L+p+++Va+ +++++ +++LP
      EPX73613.1  58 IGQFLEAIDQ-NTAIVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILP 113
                     6788899999.*********************************************9 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 2.4
                     EE-GGGSSST--TTE CS
  Prot_ATP_ID_OB  27 slagavpremLrpgD 41 
                     ++a+ ++++ Lrpg 
      EPX73613.1 281 NRADTLDPALLRPGR 295
                     68999********96 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.87   4.1e+02      40     107 ..      57     119 ..      56     154 .. 0.68
   2 !   25.3   0.0   3.7e-08   1.7e-05      15      54 ..     159     198 ..     138     210 .. 0.81
   3 ?    4.2   0.0      0.11        51     128     155 ..     221     258 ..     213     276 .. 0.68

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.87
      AAA_16  40 lvrellralekdggiflrgkcdqlesaipysalaqalareellrqlldeaesaeleawrekleeala.....a 107
                 ++ ++l+a+ ++ +i+ +++   +        ++++l   +l r+ll +++s +l++++ +l + l      +
  EPX73613.1  57 VIGQFLEAIDQNTAIVGSTTGSNY--------VVRIL-S-TLDRELLKPSASVALQRHSNALVDILPpeadsS 119
                 567888888888777767777666........55555.3.566666666667688888888888777433342 PP

  == domain 2  score: 25.3 bits;  conditional E-value: 3.7e-08
      AAA_16  15 alervrsgrpelvllsGesGvGKsslvrellralekdggi 54 
                 +++++  + p+ vll+G++G+GK+ lv++++++++++ + 
  EPX73613.1 159 LYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSVNANFIR 198
                 55666666679*********************99998333 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.11
      AAA_16 128 allsrderplvlvlDdlq...........wadeaslqll 155
                 + +++   p v+++D+++            ad + + +l
  EPX73613.1 221 RMARE-NAPAVIFIDEIDaiatkrfdaqtGADREVQRIL 258
                 44555.778*********777775555555555555554 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.9   0.1   4.8e-10   2.3e-07       1     136 [.     170     292 ..     170     293 .. 0.84

  Alignments for each domain:
  == domain 1  score: 30.9 bits;  conditional E-value: 4.8e-10
                 EEEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------..G-SEEEEESGGG--HHHHHHHHHHHHSSEEE.. CS
       AAA_5   1 dvlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar..egeilvlDEveraesevlnsLlslleerrllle 97 
                 +vlL GppGtgK++l++ +a  +n+++  v ++++ ++    g+r +           + r ar   ++++++DE++ + ++ +++      e ++ l 
  EPX73613.1 170 GVLLYGPPGTGKTMLVKAVANSVNANFIRVVGSEFVQKYLGEGPRMV---------RDVFRMARenAPAVIFIDEIDAIATKRFDAQTGADREVQRILI 259
                 59*******************************98888888888887.........666667776789******************9998888888888 PP

                 -SSSEEE---......-EEEEEESS--.-TT-TTHHHHT CS
       AAA_5  98 eggelvkaknddllerfrviatanpldrslnelspalrs 136
                 e+ ++++   +    ++ v++++n++d     l+pal++
  EPX73613.1 260 ELLTQMDGFDQ--GANVKVMMATNRAD----TLDPALLR 292
                 88887765442..23499999999999....88888865 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.0   0.0   2.1e-09     1e-06       6     103 ..     171     262 ..     166     270 .. 0.87

  Alignments for each domain:
  == domain 1  score: 29.0 bits;  conditional E-value: 2.1e-09
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTS..EEEEETGGG-------------HHHHHHHHHH CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG..ivllDEidKihpkessgadvSregVqrdLLqi 102
                 +ll gp g+Gkt+l ka+a+  ++    ++ir+  se+ +    + l +     ++    a e+   ++++DEid i+ k+   +     +Vqr+L  +
  EPX73613.1 171 VLLYGPPGTGKTMLVKAVANSVNA----NFIRVVGSEFVQ----KYLGEGPRMVRDVFRMARENApaVIFIDEIDAIATKRFDAQTGADREVQRILIEL 261
                 6899******************96....************....88888888888888888888889************955556666679****9998 PP

                 H CS
       AAA_2 103 l 103
                 l
  EPX73613.1 262 L 262
                 7 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.5   0.0   1.4e-08   6.4e-06      51     116 ..     166     236 ..     116     264 .. 0.75

  Alignments for each domain:
  == domain 1  score: 25.5 bits;  conditional E-value: 1.4e-08
      DUF815  51 lpannvLLwGarGtGKSslvkallneyaeegLrli..evekedlkelpklvellr...erperfilfvDDL 116
                  p + vLL+G  GtGK  lvka+ n+++++ +r++  e  ++ l e p++v+ +    +++   ++f+D +
  EPX73613.1 166 DPPRGVLLYGPPGTGKTMLVKAVANSVNANFIRVVgsEFVQKYLGEGPRMVRDVFrmaRENAPAVIFIDEI 236
                 46778******************************77788999*****99998752225667789999975 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.0   1.1e-07   5.3e-05      29      97 ..     161     240 ..     138     247 .. 0.62

  Alignments for each domain:
  == domain 1  score: 23.0 bits;  conditional E-value: 1.1e-07
      RuvB_N  29 reeald...hvllyGpPGlGkttlakiiakelgvkl.kitsgPvlek.....agdlaalltnl..eekdvlfideihrls 97 
                 r+  +d    vllyGpPG Gkt l k +a+ +++++ ++  +  ++k     ++ +  ++     ++  v+fidei  ++
  EPX73613.1 161 RQIGIDpprGVLLYGPPGTGKTMLVKAVANSVNANFiRVVGSEFVQKylgegPRMVRDVFRMAreNAPAVIFIDEIDAIA 240
                 55444422269**********************99625555566666322112222333322211334699999998765 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   1.2e-05    0.0058       8      39 ..     171     193 ..     166     209 .. 0.84
   2 ?    3.8   0.1      0.14        64      82     105 ..     216     243 ..     207     281 .. 0.65

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 1.2e-05
      AAA_22   8 lvvtGesGtGKTtllrrlleqldeeakaeeer 39 
                 ++++G++GtGKT+l++ ++++          +
  EPX73613.1 171 VLLYGPPGTGKTMLVKAVANSV---------N 193
                 689***************9987.........3 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.14
      AAA_22  82 leqalrarav..ielliiDEaqhlr..s 105
                 +++ +r ++   ++++ iDE++ +   +
  EPX73613.1 216 VRDVFRMAREnaPAVIFIDEIDAIAtkR 243
                 44455555555669********996541 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   2.3e-06    0.0011       5      51 ..     155     201 ..     151     287 .. 0.86

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 2.3e-06
      AAA_30   5 eQaaavealltsgdrvavltGpAGtGKttalkalreaweaaggrvig 51 
                 +Q ++ +++  ++ r ++l Gp+GtGKt+++ka+++ ++a+  rv+g
  EPX73613.1 155 KQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSVNANFIRVVG 201
                 68889999999999999********************9999888876 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   3.2e-06    0.0015      34     121 ..     169     248 ..     162     260 .. 0.84

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 3.2e-06
       AAA_7  34 kpvllvGptGtGKtviikdllkkldkekylsltinfsaqtsanqlqdiiesklekrrkgvygPpggkklvvFvDDlnmpakekygaqp 121
                 + vll+Gp GtGKt+++k + ++++         nf     ++ +q+ + +     r    ++  +   v+F+D+++  a  +++aq+
  EPX73613.1 169 RGVLLYGPPGTGKTMLVKAVANSVN--------ANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAVIFIDEIDAIATKRFDAQT 248
                 569****************999988........7777788888888888888777777777788888888888888888888888885 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       3.9   1.8e+03      33      64 ..     128     162 ..     118     165 .. 0.74
   2 !   17.2   0.0   7.6e-06    0.0036       2      30 ..     171     199 ..     170     207 .. 0.94

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 3.9
       AAA_3  33 tpdllPsdilGtevfeeke...kefefkkGpvfan 64 
                  pd+   d+ G +v +++     e+ +k+G ++ +
  EPX73613.1 128 RPDVTYNDVGGLDVQKQEVreaIELPLKQGDLYRQ 162
                 6899999****999998873334567788877766 PP

  == domain 2  score: 17.2 bits;  conditional E-value: 7.6e-06
       AAA_3   2 vllegvPGlaktllvkalakaldlefkri 30 
                 vll g PG++kt+lvka+a++++++f r+
  EPX73613.1 171 VLLYGPPGTGKTMLVKAVANSVNANFIRV 199
                 7999**********************998 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0     3e-06    0.0014       2      44 ..     171     218 ..     170     256 .. 0.72

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 3e-06
      AAA_28   2 ivitGgestGKTtlleaLaar....gypvv.pEaareileeklakged 44 
                 + + G+++tGKT l++a a+      ++vv  E++ ++l e+ +  +d
  EPX73613.1 171 VLLYGPPGTGKTMLVKAVANSvnanFIRVVgSEFVQKYLGEGPRMVRD 218
                 6799***************65544478888889888888776654444 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   7.1e-06    0.0033       2      45 .]     328     371 ..     327     371 .. 0.85

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 7.1e-06
   AAA_lid_3   2 vdlkeLAerTeGySGADlaalcreAallAlrrgikeitmedfee 45 
                 vdl+    r +  SGA ++a+ + A+llA+r ++  i ++d+ee
  EPX73613.1 328 VDLDTFIMRPDASSGAQISAIMQDAGLLAVRKSRGVILQSDIEE 371
                 6666666666777********************99999999986 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   6.5e-06    0.0031       1      71 [.     171     233 ..     171     252 .. 0.75

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 6.5e-06
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkklklkkkdsvysrnpeddfwdgYtgqevvvidDfgqvkdeenps.dla 71 
                   ++lyGp+g+GK++l+k +a+++            ++r + ++f+++Y g+   ++ D+ ++  e+ p  ++ 
    EPX73613.1 171 VLLYGPPGTGKTMLVKAVANSVN---------ANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAvIFI 233
                   689**************555554.........4446889999999999999999999998887754444444 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       5.9   2.8e+03      94     120 ..     127     152 ..      83     158 .. 0.64
   2 !   16.4   0.0   1.4e-05    0.0065       2      64 ..     171     234 ..     170     277 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 5.9
                 HHH-EEEE---STTGGG-HHHHHHHHH CS
    NTPase_1  94 seadviviDEiGkmElkskkfkeavee 120
                 +++dv   D +G + ++ ++++ea+e 
  EPX73613.1 127 ERPDVTYND-VGGLDVQKQEVREAIEL 152
                 444554433.77777777777777765 PP

  == domain 2  score: 16.4 bits;  conditional E-value: 1.4e-05
                 EEEE--TTSSHHHHHHHHHHHH...GGGEEEE.EEEEE-------EEEEEET.T--EEEEEETT CS
    NTPase_1   2 vfiTGppGvGKtTlvkkvlellkssgvkvgGf.yteevreggrrigFkivdlasgeegiLarve 64 
                 v++ GppG+GKt lvk v++ ++ + ++v G   ++++  +g r+  ++  +a ++       +
  EPX73613.1 171 VLLYGPPGTGKTMLVKAVANSVNANFIRVVGSeFVQKYLGEGPRMVRDVFRMARENAPAVIFID 234
                 6788*******************9999*9997368899999***99999999877766666555 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0     1e-05    0.0047      21      79 ..     170     227 ..     143     270 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 1e-05
                 EEEEEESTTSSHHHHHHHHHHHTT--..----TTTTSEEEEEE..SSEEEEE-TT-SSTHH CS
        TsaE  21 vilLeGdLGaGKTtlvrglakalgve..evkSPTFtlveeYelekeglyHfDlYRledeee 79 
                  +lL+G+ G+GKT+lv+++a++++ +  +        v++Y  e    +  D++R+++e+ 
  EPX73613.1 170 GVLLYGPPGTGKTMLVKAVANSVNANfiR--VVGSEFVQKYLGEGP-RMVRDVFRMARENA 227
                 49*********************999554..444466899965433.44578888866554 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   1.7e-05     0.008      51      89 ..     169     205 ..     134     223 .. 0.86
   2 ?   -2.3   0.0       4.2     2e+03     278     290 ..     227     239 ..     214     246 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.7e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  51 ravLlaGpsgtGktalaiaiskelgedvpfvalsgsevy 89 
                 r+vLl Gp+gtGkt l  a++++++    f+ ++gse+ 
  EPX73613.1 169 RGVLLYGPPGTGKTMLVKAVANSVN--ANFIRVVGSEFV 205
                 89*********************98..689999999975 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 4.2
                 XXXXXXXXXXXXX CS
       TIP49 278 vpGvlfiDevhml 290
                  p v+fiDe+  +
  EPX73613.1 227 APAVIFIDEIDAI 239
                 5899*****9765 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0     2e-05    0.0093       5      77 ..     171     248 ..     168     284 .. 0.68

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 2e-05
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyinldderdkklad.pekllelileklkeekktylflDEiqev........p 77 
                 +++ G+  +GKT+l+k ++++      +++ +   +  +k l + p ++ + ++++++e+   ++f+DEi  +        +
  EPX73613.1 171 VLLYGPPGTGKTMLVKAVANSVN---ANFIRVVGSEFVQKYLGEgP-RMVRDVFRMARENAPAVIFIDEIDAIatkrfdaqT 248
                 7899**************97766...67777766654444433314.3444444444456899*******988555554442 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   2.1e-05      0.01       1      67 [.     171     265 ..     171     333 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 2.1e-05
      AAA_18   1 IlltGtpGvGKttlakeLskrl.gf....................gvnlrdvakenglllevdpe.......aldeskrldedkldklldaleen 67 
                 +ll G+pG+GKt l k+++++  ++                    ++ +  +a+en +   + +e        +d +  +d++++  l+++l + 
  EPX73613.1 171 VLLYGPPGTGKTMLVKAVANSVnANfirvvgsefvqkylgegprmVRDVFRMARENAPAVIFIDEidaiatkRFDAQTGADREVQRILIELLTQM 265
                 799***************99974337888887777777777777766666666666666555555555666655555555555555555555554 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   3.3e-05     0.016      25      43 ..     171     189 ..     163     198 .. 0.89
   2 ?   -2.3   0.0       5.2   2.5e+03     109     157 ..     230     281 ..     226     285 .. 0.58

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 3.3e-05
  Mg_chelatase  25 lllvGppGsGKtmlakrlp 43 
                   +ll+GppG+GKtml k+++
    EPX73613.1 171 VLLYGPPGTGKTMLVKAVA 189
                   89************99875 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 5.2
  Mg_chelatase 109 vLfLDElpefkrkvlevLR.ePledgevtisrakakvefp..arfqlvaamN 157
                   v+f+DE+  + +k +++      e +++ i+  ++   f+  a++++++a+N
    EPX73613.1 230 VIFIDEIDAIATKRFDAQTgADREVQRILIELLTQMDGFDqgANVKVMMATN 281
                   7888888888877777643133455555555444444333226666666666 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.0   0.00017     0.079       3      23 ..     171     191 ..     169     198 .. 0.87
   2 ?   -0.1   0.0       1.7   7.8e+02      71     114 ..     218     263 ..     202     282 .. 0.64

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.00017
                 EEEEC-TTTCHHHHHHHHHHH CS
       NACHT   3 vilqGeaGsGKTtLlqklala 23 
                 v+l G++G GKT+L++ +a  
  EPX73613.1 171 VLLYGPPGTGKTMLVKAVANS 191
                 899*************99875 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 1.7
                 CCHHHHCCSCCCEEEEEE-STT-SS-TCH............HHHHHC CS
       NACHT  71 evwavllelperlLlilDglDelvtdlgq...kekqpvrtlLselir 114
                  v+ +  e++  +++ +D +D ++t+         ++v++ L el++
  EPX73613.1 218 DVFRMARENAP-AVIFIDEIDAIATKRFDaqtGADREVQRILIELLT 263
                 44444444444.44556888888774433455444555555556665 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.0   4.1e-05     0.019      67     161 ..      95     200 ..      65     217 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 4.1e-05
       T2SSE  67 plqdarlpekgvrlrvvllPvvagealviRkksakeltlddlgaeealkekiaevlrkavre....rgl........ilvsGgTgsGKttllyallkei 153
                 p  + +l++++  l  +l+P +      +R ++  ++t++d+g    +k++++e+++ ++++    r          +l+ G+ g+GKt l+ a+ + +
  EPX73613.1  95 PSASVALQRHSNALVDILPPEADSSISMLRPEERPDVTYNDVGGLDVQKQEVREAIELPLKQgdlyR-QigidpprgVLLYGPPGTGKTMLVKAVANSV 192
                 45555666666677778889988899999*99999**************999999999876533321.12223333389******************** PP

       T2SSE 154 nksderiv 161
                 n++  r+v
  EPX73613.1 193 NANFIRVV 200
                 *9877776 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.0    0.0011      0.54      29      57 ..     162     190 ..     147     199 .. 0.81
   2 ?    2.6   0.0      0.16        76     107     140 ..     215     248 ..     206     263 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.0011
        TniB  29 ypkrkrmpnlllvGdsnnGKtmivekFar 57 
                     + ++ +ll+G++ +GKtm+v+  a+
  EPX73613.1 162 QIGIDPPRGVLLYGPPGTGKTMLVKAVAN 190
                 5555667899**************98776 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.16
        TniB 107 leqqvlrllrelkvrvLiiDEihnllagsarkqr 140
                 + ++v r+ re  + v+ iDEi+ + + + ++q 
  EPX73613.1 215 MVRDVFRMARENAPAVIFIDEIDAIATKRFDAQT 248
                 5567889999999***********9988877775 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       8.1   3.8e+03      25      56 ..      43      75 ..      32      82 .. 0.72
   2 ?   12.9   0.0   0.00014     0.068      48      74 ..     169     195 ..     158     236 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 8.1
   IstB_IS21 25 raarsldkrkvkeLatlsfiek.kenivllGps 56
                ra++++++ +   L+ ++f+e+  +n +++G +
  EPX73613.1 43 RAQEEVKRIQSVPLVIGQFLEAiDQNTAIVGST 75
                456666666666788888888646788888865 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 0.00014
   IstB_IS21  48 enivllGpsGvGKshlaialgveavra 74 
                  +++l Gp+G+GK+ l  a++ +  ++
  EPX73613.1 169 RGVLLYGPPGTGKTMLVKAVANSVNAN 195
                 6799*************9999876555 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.1   9.2e-05     0.043       5      22 ..     171     188 ..     168     257 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 9.2e-05
      AAA_24   5 iliyGpsgiGKTtlakel 22 
                 +l+yGp+g+GKT+l+k  
  EPX73613.1 171 VLLYGPPGTGKTMLVKAV 188
                 79************9987 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0     9e-05     0.043      19      43 ..     170     194 ..     142     259 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 9e-05
      AAA_11  19 itliqGPPGtgKTktivellsqlls 43 
                  +l+ GPPGtgKT  + ++ ++++ 
  EPX73613.1 170 GVLLYGPPGTGKTMLVKAVANSVNA 194
                 5799*********999999998863 PP

>> Bac_DnaA  Bacterial dnaA  protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   0.00011     0.053      37     112 ..     171     242 ..     166     274 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 0.00011
                 EEEE-SSSSSHHHHHHHHHHHHHHHSSSS-EEEEEHHHHHHHHHHHHHTT-HHHHHHHHTT-.SEEEEE-GGGGTT- CS
    Bac_DnaA  37 lfiygevGlGktHLlkaignevlenapelrvvYltaeeFlnelvkalrdkkaeefkeklrkv.DvLliDDiqflagk 112
                 +++yg+ G Gkt L+ka++n v +n+   rv    + eF+++ +        + f+    ++  v+ iD+i  +a+k
  EPX73613.1 171 VLLYGPPGTGKTMLVKAVANSVNANFI--RV---VGSEFVQKYLGEGPRMVRDVFRMARENApAVIFIDEIDAIATK 242
                 79******************9988763..33...3556666666555555555555544433145556666666655 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   0.00019     0.091       2      28 ..     171     199 ..     171     264 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.00019
      AAA_33   2 vllvGlpGsGKstlaerllkklg..avll 28 
                 vll G+pG+GK+ l++ +++     ++++
  EPX73613.1 171 VLLYGPPGTGKTMLVKAVANSVNanFIRV 199
                 7899*************998776555555 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.5   0.00054      0.25      36      57 ..     171     192 ..     168     257 .. 0.87
   2 ?   -0.2   0.0       1.3   6.3e+02     130     164 ..     216     249 ..     193     278 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00054
      AAA_25  36 allaGapgtGKttlaldlalav 57 
                 +ll+G+pgtGKt+l+  +a +v
  EPX73613.1 171 VLLYGPPGTGKTMLVKAVANSV 192
                 69************98877665 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 1.3
      AAA_25 130 vdaleaaieevegvrlvviDplsralggdensnsd 164
                 v+++ + ++e + ++++ iD ++++     ++++ 
  EPX73613.1 216 VRDVFRMARE-NAPAVIFIDEIDAIATKRFDAQTG 249
                 5566777777.669999999999876653333333 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00067      0.32      23      45 ..     171     193 ..     159     211 .. 0.83
   2 ?   -0.2   0.0       1.7     8e+02      45      68 ..     224     247 ..     195     285 .. 0.65

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00067
    ATPase_2  23 yfiYGpegsGKtaLlkeiienle 45 
                 +++YGp g GKt L+k +++  +
  EPX73613.1 171 VLLYGPPGTGKTMLVKAVANSVN 193
                 789*************9998764 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 1.7
    ATPase_2  45 edkdkyviyyialreesiskldef 68 
                 ++    vi+++++  ++++++d  
  EPX73613.1 224 RENAPAVIFIDEIDAIATKRFDAQ 247
                 333334555555555555555555 PP

>> AFG1_ATPase  AFG1-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00015     0.071      58      88 ..     164     194 ..     124     240 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00015
  AFG1_ATPase  58 svepvrglYlwGgvGrGKtylmdlffeslpv 88 
                     p+rg+ l+G+ G GKt+l+    +s++ 
   EPX73613.1 164 GIDPPRGVLLYGPPGTGKTMLVKAVANSVNA 194
                  4679*****************9987777665 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00052      0.25      12      34 ..     170     192 ..     164     200 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00052
      AAA_19  12 vllvtaGpGtGKTrvlkhivall 34 
                  +l+ ++pGtGKT ++k++ + +
  EPX73613.1 170 GVLLYGPPGTGKTMLVKAVANSV 192
                 5899**********999987766 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0       2.2     1e+03     113     147 ..      61      94 ..      48     104 .. 0.76
   2 ?    8.6   0.0     0.003       1.4      23      47 ..     169     193 ..     156     209 .. 0.81
   3 ?   -1.1   0.0       2.9   1.4e+03      96     108 ..     230     242 ..     222     285 .. 0.54

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 2.2
                      HHHHHHHSEEESBTSSSEEE--EEEEEEESS-HHH CS
  Sigma54_activat 113 LlrvlqegevervGsskeikvdvriiaatnedlee 147
                      +l++++++    vGs++  +  vri+++ +++l +
       EPX73613.1  61 FLEAIDQN-TAIVGSTTGSNYVVRILSTLDRELLK 94 
                      56666655.46799999999999999999988866 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.003
                      S-EEEECSTTSSHHHHHHHHHHHST CS
  Sigma54_activat  23 lsvlitGesGtGKellaraiheask 47 
                        vl+ G  GtGK++l +a+ ++ +
       EPX73613.1 169 RGVLLYGPPGTGKTMLVKAVANSVN 193
                      569**************99977554 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 2.9
                      EEEEETGGGS-HH CS
  Sigma54_activat  96 tlfLDeigelple 108
                      ++f+Dei  + ++
       EPX73613.1 230 VIFIDEIDAIATK 242
                      6788888777543 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0    0.0004      0.19      16      53 ..     168     203 ..     161     208 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.0004
  Zeta_toxin  16 PklillgGqpGAGKselaellkdelerqgnvvrldpDd 53 
                 P  +ll G pG GK+ l +++++++  + n++r+ + +
  EPX73613.1 168 PRGVLLYGPPGTGKTMLVKAVANSV--NANFIRVVGSE 203
                 77899*******************9..9****998765 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       2.3   1.1e+03      67     122 ..      13      69 ..       4      83 .. 0.49
   2 ?    8.6   0.0    0.0022         1      15      37 ..     164     186 ..     155     193 .. 0.85
   3 ?   -0.7   0.0       1.5   7.3e+02     114     139 ..     222     247 ..     209     272 .. 0.57

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 2.3
      ATPase  67 akslGwdlekleeegklaiidasesaeesaee.kdkedleelieelaeaikeikakr 122
                  k+l   le l  ++ ++  d  + ++e +++ ++ + ++++   + + +++i ++ 
  EPX73613.1  13 WKALQRQLELLDLQEGFIKEDCKSLKRELIRAqEEVKRIQSVPLVIGQFLEAIDQNT 69 
                 555555555555444455555444333333222455555555555555555555555 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0022
      ATPase  15 GipegrvvlitGepGtGKtifal 37 
                 Gi   r vl++G pGtGKt++++
  EPX73613.1 164 GIDPPRGVLLYGPPGTGKTMLVK 186
                 67777889***********9976 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 1.5
      ATPase 114 aikeikakrvviDsitglayeekeav 139
                 + +e     + iD i+++a++  +a+
  EPX73613.1 222 MARENAPAVIFIDEIDAIATKRFDAQ 247
                 55666667888999988844433332 PP

>> Parvo_NS1  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00052      0.25     117     138 ..     171     192 ..     166     199 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00052
   Parvo_NS1 117 vwfyGpantGktnlaeaIakav 138
                 v++yGp+ tGkt+l +a a+ v
  EPX73613.1 171 VLLYGPPGTGKTMLVKAVANSV 192
                 89*****************987 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       9.5   4.5e+03      37      64 ..      25      54 ..      14     122 .. 0.60
   2 ?   10.5   0.0    0.0014      0.64      12      37 ..     169     194 ..     162     362 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 9.5
                -SEEEEEETTCEGGG..B-HHHCCHCEEEE CS
                xxxxxxxxxxxxxxx..xxxxxxxxxxxxx RF
    ABC_tran 37 pteGeilldgkdlke..qeleslrkeigvl 64
                 +eG i+ d k+lk+  ++ ++  k+i+ +
  EPX73613.1 25 LQEGFIKEDCKSLKRelIRAQEEVKRIQSV 54
                456666555555555442222222333322 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.0014
                 SEEEEEESTTSSHHHHHHHHTTSS-- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  12 ekvaivGenGaGKStLlkllagllkp 37 
                 + v + G+ G+GK+ L+k++a+ ++ 
  EPX73613.1 169 RGVLLYGPPGTGKTMLVKAVANSVNA 194
                 568899*************9988764 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00084       0.4       4      37 ..     172     205 ..     170     260 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00084
                 EEEESTTCCHHHHHHHHHCT--SS-EEEEESS-S CS
        cobW   4 vltGflGsGKTtLlnhllenraglklavivNefg 37 
                 +l G++G+GKT+L++++ +  + + + v+  ef 
  EPX73613.1 172 LLYGPPGTGKTMLVKAVANSVNANFIRVVGSEFV 205
                 688**************99999988999888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (389 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       635  (0.0354175); expected 358.6 (0.02)
Passed bias filter:                      561  (0.0312901); expected 358.6 (0.02)
Passed Vit filter:                       106  (0.00591221); expected 17.9 (0.001)
Passed Fwd filter:                        38  (0.00211947); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              38  [number of targets reported over threshold]
# CPU time: 0.57u 0.28s 00:00:00.85 Elapsed: 00:00:00.40
# Mc/sec: 2895.20
//
Query:       EPX73614.1  [L=170]
Description: 60S ribosomal protein L15 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.1e-79  264.8   7.7      5e-79  264.5   7.7    1.0  1  Ribosomal_L15e  Ribosomal L15


Domain annotation for each model (and alignments):
>> Ribosomal_L15e  Ribosomal L15
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  264.5   7.7   2.8e-83     5e-79       1     161 [.       2     162 ..       2     167 .. 0.99

  Alignments for each domain:
  == domain 1  score: 264.5 bits;  conditional E-value: 2.8e-83
                     -SHHHHHHHTTSTTSHHHHHHHHHHHHHHTTS-SEEEESS-SSHHHHHHHT--SSTTEEEEEEEEE-SS---..---SS---GGGG-SSS---SS CS
  Ribosomal_L15e   1 gaykylrelwkkkqsdvlrellrerlweyrqepavvrverptrldrArrLGYkakqGivvvrvrvrrGgrkkkvskgktgrkpkrqgvnklkpak 95 
                     gaykyl+el kkkqsdv  +l r+r+weyrq ++v+r++rp+r+d+ArrLGYkakqG+vv+r+rvrrGgrk++v+kg++++kp++qgvn+lk ++
      EPX73614.1   2 GAYKYLEELSKKKQSDVNLFLSRVRAWEYRQMNVVHRASRPSRPDKARRLGYKAKQGYVVYRIRVRRGGRKRPVPKGQVYGKPVHQGVNHLKYQR 96 
                     79********************************************************************************************* PP

                     -HHHHHHHHHHHHSTTSEEEEEEEEEEESSEEEEEEEEE-TTSHHHHT-TTTGGGGSGGGTTGGGG CS
  Ribosomal_L15e  96 slqaiaeervgrklpnlrvLnSYwvgeDgtykyyEvilvDpshkairndkkinwickkvhkhRelr 161
                     sl+ +aeervgr++ nlrvLnSYwv++D+tyk+yEvi+vDpshkair+d++inwic++vhkhRe+r
      EPX73614.1  97 SLRCTAEERVGRRCANLRVLNSYWVNQDATYKFYEVICVDPSHKAIRRDPRINWICNAVHKHREAR 162
                     ****************************************************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       395  (0.0220313); expected 358.6 (0.02)
Passed bias filter:                      292  (0.0162865); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 1338.79
//
Query:       EPX73615.1  [L=201]
Description: 60S ribosomal protein L15 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      3e-88  294.5   8.6    3.7e-88  294.3   8.6    1.0  1  Ribosomal_L15e  Ribosomal L15


Domain annotation for each model (and alignments):
>> Ribosomal_L15e  Ribosomal L15
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  294.3   8.6   2.1e-92   3.7e-88       1     183 [.       2     183 ..       2     189 .. 0.98

  Alignments for each domain:
  == domain 1  score: 294.3 bits;  conditional E-value: 2.1e-92
                     -SHHHHHHHTTSTTSHHHHHHHHHHHHHHTTS-SEEEESS-SSHHHHHHHT--SSTTEEEEEEEEE-SS---..---SS---GGGG-SSS---SS CS
  Ribosomal_L15e   1 gaykylrelwkkkqsdvlrellrerlweyrqepavvrverptrldrArrLGYkakqGivvvrvrvrrGgrkkkvskgktgrkpkrqgvnklkpak 95 
                     gaykyl+el kkkqsdv  +l r+r+weyrq ++v+r++rp+r+d+ArrLGYkakqG+vv+r+rvrrGgrk++v+kg++++kp++qgvn+lk ++
      EPX73615.1   2 GAYKYLEELSKKKQSDVNLFLSRVRAWEYRQMNVVHRASRPSRPDKARRLGYKAKQGYVVYRIRVRRGGRKRPVPKGQVYGKPVHQGVNHLKYQR 96 
                     79********************************************************************************************* PP

                     -HHHHHHHHHHHHSTTSEEEEEEEEEEESSEEEEEEEEE-TTSHHHHT-TTTGGGGSGGGTTGGGGT-SHHHHHHTT-S-SS.TT-TT CS
  Ribosomal_L15e  96 slqaiaeervgrklpnlrvLnSYwvgeDgtykyyEvilvDpshkairndkkinwickkvhkhRelrGltsagkksRGlrkkglkgaek 183
                     sl+ +aeervgr++ nlrvLnSYwv++D+tyk+yEvi+vDpshkair+d++inwic++vhkhRe+rGlts gkksRG+  kg++++++
      EPX73615.1  97 SLRCTAEERVGRRCANLRVLNSYWVNQDATYKFYEVICVDPSHKAIRRDPRINWICNAVHKHREARGLTSIGKKSRGI-AKGHRFNNS 183
                     ******************************************************************************.99*999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       486  (0.0271069); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.28s 00:00:00.71 Elapsed: 00:00:00.44
# Mc/sec: 1383.86
//
Query:       EPX73616.1  [L=89]
Description: CENP-X protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-21   75.4   0.2    3.7e-21   75.2   0.2    1.1  1  CENP-X    CENP-S associating Centromere protein X


Domain annotation for each model (and alignments):
>> CENP-X  CENP-S associating Centromere protein X
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.2   0.2   2.1e-25   3.7e-21       2      75 .]      11      88 ..      10      88 .. 0.92

  Alignments for each domain:
  == domain 1  score: 75.2 bits;  conditional E-value: 2.1e-25
                HHHHHHHCCC-SS.TT-EE-CCCHHHHHHHHHHHHHHHHHHHHHHHHHTT-SE.......EECHHHHH.HCHCHHCHC CS
      CENP-X  2 ellarlLqesfkd.ektkItkdalelvaeylklFvrEavaRaaeeaeeegkeeseksk..levedLek.iapqLlLDf 75
                ++lar+L+++f + + tkIt +alel+++y++++++Eav+R++ee++++  + s++++  le+edLe+ ia+qL LDf
  EPX73616.1 11 NTLARILTLYFNSeKGTKITPSALELITQYIRIYTKEAVCRSYEEKRRSSITMSDEDDivLELEDLENgIAAQLALDF 88
                69*******8887366****************************9999988887777799*****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       548  (0.030565); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.25s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 686.01
//
Query:       EPX73617.1  [L=212]
Description: Swr1 complex subunit Swc5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-15   57.4   3.0    3.3e-15   55.9   3.0    1.8  1  BCNT      Bucentaur or craniofacial development
  ------ inclusion threshold ------
       0.36   11.3  10.1       0.53   10.7  10.1    1.4  1  DUF2894   Protein of unknown function (DUF2894)
        3.5    6.6  18.5        4.7    6.2  18.5    1.2  1  Roughex   Drosophila roughex protein


Domain annotation for each model (and alignments):
>> BCNT  Bucentaur or craniofacial development
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.9   3.0   5.5e-19   3.3e-15       2      74 ..     140     210 ..     139     211 .. 0.96

  Alignments for each domain:
  == domain 1  score: 55.9 bits;  conditional E-value: 5.5e-19
        BCNT   2 sglddilaeitakkkKlstleKSklDWeaykdkegikeeLeahnkgkegYlerqdFLqRvddrkeekereaRl 74 
                 s l++++a+  akk+K +tle  +  W+ ++++++i++eL+ +nk+  g++erq+FL++++   eek r++R+
  EPX73617.1 140 SPLAKVQAKQAAKKSKPNTLEQAQQNWSDFVKEKDIQDELRLANKD--GFVERQEFLAKTHSAYEEKVRSMRK 210
                 56899999999***********************************..9*********************996 PP

>> DUF2894  Protein of unknown function (DUF2894)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7  10.1   8.9e-05      0.53      57     140 ..      64     180 ..      25     186 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 8.9e-05
     DUF2894  57 e.........kaaaealaeaaakapaaspstLaaLlaqiakrasaakeaaaaeeaaaaP........................aatveateelkaleyf 122
                 e         ++++ + ++  +++p+a p + +++++  +k+ s+++ ++++++ +++P                        a + ++++++++le++
  EPX73617.1  64 EssnpkedleEKKETNEEKPVEEQPEAVPAPVESVTKANEKEYSTEQPKQVPSKEQEKPiekpqlkkrplvrkrresplakvqAKQAAKKSKPNTLEQA 162
                 1222322222333334444455566667799999999999998999999999999999999999*****************9888999999******** PP

     DUF2894 123 retwsklstekqlrqsla 140
                 +++ws    ek +++ l+
  EPX73617.1 163 QQNWSDFVKEKDIQDELR 180
                 **********99998776 PP

>> Roughex  Drosophila roughex protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2  18.5   0.00079       4.7     231     336 ..      18     129 ..       5     157 .. 0.65

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.00079
     Roughex 231 eevpqarslsvrrilfadgadedgdedtdgsveekkddasepdlpdqnkeedkd.....eqeqqaeqeeqaqqqaeeapvssdistalke....tnpp. 319
                 + +pq +s s     f+d   + g+e+ +g  eek +++   d+ + +k e  +     e+++++++e++ ++q+e  p+  ++ t  +e    t+ p 
  EPX73617.1  18 DFIPQDASSS--ESSFSD--ADSGEEEVEGENEEKAEQTKALDVQESKKAESSNpkedlEEKKETNEEKPVEEQPEAVPAPVESVTKANEkeysTEQPk 112
                 4456666555..345663..357999********************999998887777888888999999******99887777765544112233230 PP

     Roughex 320 aepivgernppeksiis 336
                   p   + +p ek  + 
  EPX73617.1 113 QVPSKEQEKPIEKPQLK 129
                 33444445555665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2391  (0.133359); expected 358.6 (0.02)
Passed bias filter:                      556  (0.0310112); expected 358.6 (0.02)
Passed Vit filter:                        96  (0.00535445); expected 17.9 (0.001)
Passed Fwd filter:                        23  (0.00128284); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.67u 0.28s 00:00:00.95 Elapsed: 00:00:00.43
# Mc/sec: 1477.46
//
Query:       EPX73618.1  [L=283]
Description: diphthine synthase Dph5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.1e-22   80.2   0.1    3.2e-22   79.5   0.1    1.3  1  TP_methylase  Tetrapyrrole (Corrin/Porphyrin) Methylases


Domain annotation for each model (and alignments):
>> TP_methylase  Tetrapyrrole (Corrin/Porphyrin) Methylases
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.5   0.1   1.8e-26   3.2e-22       1     213 []       1     237 [.       1     237 [. 0.73

  Alignments for each domain:
  == domain 1  score: 79.5 bits;  conditional E-value: 1.8e-26
  TP_methylase   1 klylVGvGpGdpellTvrAlralktadvvlgddsraleilldllaeel.eleapmgkekepleeayeeiaealaealragkdVvllvsGDPlvygtg 96 
                   ++yl+G+G+ d +++T+r+l+++k+++ v+ ++  +++il  l+++e+ e+ + ++ +  ++e   e +++ + +++++  dV++lv GDP+ ++t+
    EPX73618.1   1 MFYLIGLGLYDENDITLRGLQTVKKCQRVYLEA--YTSIL--LVNKERlESLYEKEITLADREM-VETNSDEILKDADT-CDVAMLVVGDPMGATTH 91 
                   79***************************9888..77777..4455444444444444233322.33334444444444.47*************** PP

  TP_methylase  97 selvealrareagieveviPGvsslqaaaarlgiplteggevlsvllpglakeeereleallan....gdtlvll.....................k 168
                   + lv  lrare +i+v++i   s+++ + a+ g+ l+++g+++s+++   + ++++ ++++ +n     +tlvll                      
    EPX73618.1  92 ADLV--LRARELNIPVRMIHNASIMNGVGAS-GLQLYKFGQTVSLVYFEGNYRPQSFYDRIKENvslgLHTLVLLdikvkeqswenlargrkiyepP 185
                   ****..88888*****************986.7777777777777746666678888888888888889******7777776665555555444330 PP

  TP_methylase 169 aprk..........laelaelLkea.lyddttpvavveragtedervvrgtleela 213
                      +          + e+ e+ ke  + +d   ++++ r+g +d+ +  gtl+e+a
    EPX73618.1 186 ---RymsaslaaqqMMEVEEDRKEDiCSPDS-LAVAIGRLGSDDQVIASGTLGEIA 237
                   ...1333333334466666666888888866.999999***************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (283 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       353  (0.0196888); expected 358.6 (0.02)
Passed bias filter:                      290  (0.0161749); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2006.08
//
Query:       EPX73619.1  [L=588]
Description: AGC/PDK1 protein kinase Ksg1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.3e-64  216.4   0.1    5.7e-64  216.0   0.1    1.2  1  Pkinase         Protein kinase domain
    3.3e-31  108.5   0.0      5e-31  107.9   0.0    1.2  1  Pkinase_Tyr     Protein tyrosine kinase
    2.6e-06   27.5   0.4    1.3e-05   25.2   0.0    2.4  2  PH_3            PH domain
    0.00012   22.1   0.0    0.00033   20.7   0.0    1.6  2  APH             Phosphotransferase enzyme family
    0.00019   20.8   0.0    0.00032   20.1   0.0    1.2  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
    0.00036   19.6   0.1    0.00057   18.9   0.1    1.3  1  Haspin_kinase   Haspin like kinase domain
     0.0016   17.9   0.0     0.0078   15.6   0.0    1.9  2  Kinase-like     Kinase-like
     0.0064   16.1   0.3      0.015   14.9   0.3    1.6  1  RIO1            RIO1 family
  ------ inclusion threshold ------
      0.021   14.5   0.4          2    8.0   0.0    2.3  2  FTA2            Kinetochore Sim4 complex subunit FTA2
      0.022   13.6   0.1      0.038   12.8   0.1    1.3  1  Pkinase_fungal  Fungal protein kinase
       0.49   10.3   1.6       0.65    9.9   0.3    1.8  2  Herpes_US9      Alphaherpesvirus tegument protein US9


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  216.0   0.1   3.5e-67   5.7e-64       3     264 .]     101     365 ..      99     365 .. 0.94

  Alignments for each domain:
  == domain 1  score: 216.0 bits;  conditional E-value: 3.5e-67
                 EEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHS.CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHH CS
     Pkinase   3 kleklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklk.hpnivrlyevfeekdelylvleyveggeladllerkgslseee 99 
                   e +GeGs+++V++a+e++t++++A+K+++k+++ k+k+ k v  E + l  ++ hp  +rl+++f+++++ly+v+ ++++gel d++ + g+++e+ 
  EPX73619.1 101 FGEIIGEGSYSTVLSATENNTKREYAIKVLDKRHIIKEKKvKYVNIEKEALYLISkHPGFIRLFYTFQDTQSLYFVFSLARNGELLDYIYKLGKFNEAC 199
                 6789*********************************9998999999999999999******************************************* PP

                 HHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS..............BCTTTSCGGGS-HHHHTTSCBSHHHHHHHHH CS
     Pkinase 100 akkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk..............ltsfvgtseYlAPEvlkeneyskkvDvWslG 184
                 ++ + + +l +++++H++g+iHrDlKpeNiL+d++   Ki+DFG ak  ++ +k               +sfvgt +Y++PEvl++++ s+++DvW+ G
  EPX73619.1 200 VQYYGALLLDSIDFMHKQGVIHRDLKPENILLDDNMRTKIIDFGSAKIQKTAEKseqlsddlptsdnhSRSFVGTARYVSPEVLNDKNASTASDVWAFG 298
                 *********************************9999**********999999899***********99****************************** PP

                 HHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 185 vilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 +il+++ltgkppf + ++             ++kil   +++++ + ++se+a dl+kk+l   p++Rlt +e+ +hp++
  EPX73619.1 299 CILFQMLTGKPPFVAGNE----------YLVFQKIL---HLSYEIPIDVSETASDLIKKILVLHPNERLTTKEIRDHPFF 365
                 **************3333..........23333555...5689999*********************************8 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.9   0.0   3.1e-34     5e-31       2     256 ..     100     360 ..      99     362 .. 0.85

  Alignments for each domain:
  == domain 1  score: 107.9 bits;  conditional E-value: 3.1e-34
                  EEEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEE.STTSSHHHHHHHHH.HHHHHHTS.-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTC CS
  Pkinase_Tyr   2 elgkklGeGafGkVvegtlkgekekkevkVavKtl.keeateeekeelle.eakimkkl.khpnivkllgvctkeepllivteyvkgGdLlkfLrkke 96 
                  ++g+ +GeG++++V ++t +    +++ + a+K+l k++  +e+k + ++ e + +  + khp  ++l     ++++l++v+ ++++G+Ll+++ k  
   EPX73619.1 100 SFGEIIGEGSYSTVLSATEN----NTKREYAIKVLdKRHIIKEKKVKYVNiEKEALYLIsKHPGFIRLFYTFQDTQSLYFVFSLARNGELLDYIYKL- 192
                  57899*************99....999999*****4444445556666666999999999***********************************98. PP

                  TTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEE........EETTSST...SGGGGS-HHHHHHSEEE CS
  Pkinase_Tyr  97 kekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddey........vkkeeak...lpvkWmapEslkekkft 183
                    k++   +  + + + + +++++++ ++Hrdl   N+Ll++n+  ki DfG a+  ++ ++         +++++++      ++++pE+l++k+ +
   EPX73619.1 193 -GKFNEACVQYYGALLLDSIDFMHKQGVIHRDLKPENILLDDNMRTKIIDFGSAKIQKTAEKSeqlsddlpTSDNHSRsfvGTARYVSPEVLNDKNAS 289
                  .99999999999999*************************************887553322222235555533333332225689************* PP

                  HHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHH CS
  Pkinase_Tyr 184 sksDvWsfGvllwEiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfselv 256
                  ++sDvW+fG +l+ ++t g+ p+   ++  v++k+ +    e p +++e+  +l+kk +  +p+eR t +e++
   EPX73619.1 290 TASDVWAFGCILFQMLT-GKPPFVAGNEYLVFQKILH-LSYEIPIDVSETASDLIKKILVLHPNERLTTKEIR 360
                  *****************.*******999999999954.346778889*********************99987 PP

>> PH_3  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.2       6.4     1e+04      18      41 ..     129     152 ..     122     157 .. 0.62
   2 !   25.2   0.0     8e-09   1.3e-05      25      98 ..     483     564 ..     445     569 .. 0.78

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 6.4
        PH_3  18 ivkKrkglfarkRqllltdgPrLi 41 
                 +++Kr+ + ++k   +  ++  L+
  EPX73619.1 129 VLDKRHIIKEKKVKYVNIEKEALY 152
                 466666666666666655555555 PP

  == domain 2  score: 25.2 bits;  conditional E-value: 8e-09
        PH_3  25 lf..arkRqllltdgPrLiyvDpek...mekkGeIpls.kelkve..vknskkFlihtpkrtyyledpegnaakWvkaieev 98 
                 lf  +r R ++lt+  r++ v  ++    ++k e p++   l+v+    +++++++ tp+r  ++edp + a  W++ i+  
  EPX73619.1 483 LFrkKRPRTFILTTFGRCLLVAMNSagrATIKEELPVKsVGLRVHgvKNSDHTWVMETPTRSWSFEDPREPASTWIELINRA 564
                 553356689********999987652226899****984357776314456789*************************976 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0     2e-07   0.00033     163     198 ..     214     247 ..     176     251 .. 0.79
   2 ?   -2.4   0.0       2.3   3.7e+03       3      31 ..     525     553 ..     524     569 .. 0.84

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 2e-07
                 SS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-EE CS
         APH 163 elptvllHgDlhpgNllvdpddgrvtGviDfedagl 198
                   +++++H+Dl+p N+l+d d+ r t +iDf+ a++
  EPX73619.1 214 MHKQGVIHRDLKPENILLD-DNMR-TKIIDFGSAKI 247
                 557899*************.6666.68*****9976 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 2.3
                 EEE--.SSCEEEEEEETT--EEEEEE-TT CS
         APH   3 relsggasnrtylvttpagryvlrrnppa 31 
                 r+++  +s++t+  +tp++++ + +++++
  EPX73619.1 525 RVHGVKNSDHTWVMETPTRSWSFEDPREP 553
                 67888899**********99988877766 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0     2e-07   0.00032     131     179 ..     211     255 ..     187     266 .. 0.88

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 2e-07
         Kdo 131 iaklhragvnHadlyaknillqqeeeeeaeiwliDldkarlrlradrwr 179
                 i  +h+ gv H+dl + nill+ +     +  +iD+  a+ + +a++ +
  EPX73619.1 211 IDFMHKQGVIHRDLKPENILLDDNM----RTKIIDFGSAKIQKTAEKSE 255
                 677******************9997....*******9999888776654 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.1   3.5e-07   0.00057     153     259 ..     141     252 ..      97     277 .. 0.70

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 3.5e-07
  Haspin_kinase 153 lklvkgtypglllllqdkvlkek........pdfyseqqlflvlllkdkGtdLeev.klkswkqalsifwqivkiLyvaE..tkfeFEHRdLhldn 237
                    +k v+   ++ l+l+       k          f+++q l+ v  l  +G+ L+ + kl ++++a   ++  +  L   +   k    HRdL+ +n
     EPX73619.1 141 VKYVNIE-KEALYLIS------KhpgfirlfYTFQDTQSLYFVFSLARNGELLDYIyKLGKFNEACVQYYGAL-LLDSIDfmHKQGVIHRDLKPEN 228
                    3333222.22233332......233444444788889999999999999999999989999999987777654.33333311566788******** PP

  Haspin_kinase 238 iLvdknlnvtlidlklsRle..ss 259
                    iL+d+n+   +id+  ++++  ++
     EPX73619.1 229 ILLDDNMRTKIIDFGSAKIQktAE 252
                    *******************95433 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       0.4   6.5e+02      17      47 ..     102     132 ..      94     156 .. 0.78
   2 !   15.6   0.0   4.8e-06    0.0078     160     286 ..     214     351 ..     188     353 .. 0.71

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.4
  Kinase-like  17 gellkkgdrsvvfevkdqetgeplavkvfll 47 
                  ge++++g  s v+ +++++t+ + a+kv   
   EPX73619.1 102 GEIIGEGSYSTVLSATENNTKREYAIKVLDK 132
                  78999*****************999999755 PP

  == domain 2  score: 15.6 bits;  conditional E-value: 4.8e-06
  Kinase-like 160 LqakglvhgkftvdnllldekgglmlggftaLvragtkvvlseve......kgfaPpEllgsrgg..ytrknktkmthkldaWqlGlviyriwclklP 249
                  ++++g++h +++++n+lld + + ++ +f++   ++t  + se             + ++g +     +  n  + + + d+W+ G   + +   k P
   EPX73619.1 214 MHKQGVIHRDLKPENILLDDNMRTKIIDFGSAKIQKTAEK-SEQLsddlptSDNHSRSFVGTARYvsPEVLNDKNASTASDVWAFGCILFQMLTGKPP 310
                  799***************************9887777777.44443555663344466666643322234577889999**************99999 PP

  Kinase-like 250 ltlateeakeew....kfklckkipekvkaLlkkfLqlsqe 286
                  +    e    +     +++    ++e    L+kk+L l+ +
   EPX73619.1 311 FVAGNEYLVFQKilhlSYEIPIDVSETASDLIKKILVLHPN 351
                  97666654444322224444445556666677777666555 PP

>> RIO1  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.3     9e-06     0.015     104     167 ..     196     260 ..     112     265 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 9e-06
                 HHHHHHHHHHHHHHHHHHHHTSTEEESS-STTSEEEETT.EEEE--GTTEEETTSTTHHHHHHHH CS
        RIO1 104 eeeaeelyeevleemrklykeaglvHaDLSeyNvlvded.kvviIDvsQaveldhpnalefLerD 167
                 +e   ++y  +l   + +++++g++H DL   N+l+d++ +  iID++ a  ++  +  e L  D
  EPX73619.1 196 NEACVQYYGALLLDSIDFMHKQGVIHRDLKPENILLDDNmRTKIIDFGSAKIQKTAEKSEQLSDD 260
                 4666778888888889999****************************987666665555556555 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.1     0.015        25      22      57 ..      97     134 ..      88     158 .. 0.72
   2 ?    8.0   0.0    0.0012         2     181     214 ..     207     245 ..     196     246 .. 0.81

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.015
        FTA2  22 kdiefleyLgkglhsiVlkvkirgk..eYALKlFrfle 57 
                  d+ f e++g+g  s Vl +  ++   eYA+K+  + +
  EPX73619.1  97 SDFSFGEIIGEGSYSTVLSATENNTkrEYAIKVLDKRH 134
                 689999************998776445*****976553 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0012
        FTA2 181 llrdlkklhklgIvvrDlkeenyi.....dgkLvDlsaa 214
                 ll+ ++ +hk+g+++rDlk+en++       k++D+++a
  EPX73619.1 207 LLDSIDFMHKQGVIHRDLKPENILlddnmRTKIIDFGSA 245
                 6788999**************986433336789999876 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   2.3e-05     0.038     324     396 ..     215     293 ..     207     304 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2.3e-05
  Pkinase_fungal 324 lkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddsses...........garertGTleFmaievlkgeeHsyrhD 396
                     +k+g++HrD   +Nil+      ++ +  +iD+  ak  ++ ++++           ++r  +GT+ +++ evl++++ s   D
      EPX73619.1 215 HKQGVIHRDLKPENILLD-----DNMRTKIIDFGSAKIQKTAEKSEqlsddlptsdnHSRSFVGTARYVSPEVLNDKNASTASD 293
                     489**************9.....5688899*****9988875555555555555443337799***********9877666655 PP

>> Herpes_US9  Alphaherpesvirus tegument protein US9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.0       9.4   1.5e+04       4      29 ..     115     140 ..     115     142 .. 0.76
   2 ?    9.9   0.3    0.0004      0.65      24      51 ..     483     510 ..     477     513 .. 0.81

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 9.4
  Herpes_US9   4 sesEdEaAdeFLvRiGkyqsklrrRk 29 
                 s  E+++  e+  ++  + + ++ +k
  EPX73619.1 115 SATENNTKREYAIKVLDKRHIIKEKK 140
                 56789999999888888888887765 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.0004
  Herpes_US9  24 klrrRkkrtfCvitliivllvAvlsaaF 51 
                   r+++ rtf   t   +llvA+ sa+ 
  EPX73619.1 483 LFRKKRPRTFILTTFGRCLLVAMNSAGR 510
                 44566669*****************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (588 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       530  (0.029561); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.60u 0.25s 00:00:00.85 Elapsed: 00:00:00.41
# Mc/sec: 4333.86
//
Query:       EPX73620.1  [L=96]
Description: U6 snRNP-associated protein core protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.7e-17   61.4   0.2    5.8e-17   61.1   0.2    1.1  1  LSM       LSM domain
     0.0052   16.7   0.1     0.0058   16.6   0.1    1.3  1  DUF1461   Protein of unknown function (DUF1461)
     0.0055   16.8   0.1     0.0065   16.6   0.1    1.2  1  SM-ATX    Ataxin 2 SM domain


Domain annotation for each model (and alignments):
>> LSM  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.1   0.2   9.7e-21   5.8e-17       2      66 ..       6      71 ..       5      72 .. 0.96

  Alignments for each domain:
  == domain 1  score: 61.1 bits;  conditional E-value: 9.7e-21
                HHHHTTTSEEEEEETTSEEEEEEEEEEETTSEEEEEEEEEEETTET.EEEEEEEEEEEGGGEEEEE CS
         LSM  2 flkklinkkvtvelkngrelrGtLkgfDqfmNlvLedveetlkdkk.ekrklglvliRGnnivlis 66
                f+k li+ +vtvelkn++ +rG+Lk++Dqf+N+ Le++ ++  +k  + + +++++iRG+ +++++
  EPX73620.1  6 FFKTLIDTEVTVELKNDMSIRGILKSVDQFLNVKLENIAVVESEKYpHMAAVKDLFIRGSVVRYVH 71
                899***********************************999999889*****************97 PP

>> DUF1461  Protein of unknown function (DUF1461)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.1   9.7e-07    0.0058      76     114 ..      45      82 ..       2      94 .. 0.74

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 9.7e-07
     DUF1461  76 ffssekeieHmaDVkkLfllglivrlvtlillvllllll 114
                 +  s +   Hma Vk+Lf+ g +vr+v +  + + ++ll
  EPX73620.1  45 VVES-EKYPHMAAVKDLFIRGSVVRYVHMSSAYVDTILL 82 
                 3344.7899******************998886555555 PP

>> SM-ATX  Ataxin 2 SM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.1   1.1e-06    0.0065       8      51 ..       7      48 ..       2      73 .. 0.77

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.1e-06
                HHTTTTSEEEEEETTS-EEEEEEEEE-T..T--EEEEEEEETTS CS
      SM-ATX  8 ltslvGkevevtvknGevyeGifstvslekdfsvvLkmarkvkk 51
                +++l+ +ev+v++kn+  ++Gi+++v+    ++v L++  +v++
  EPX73620.1  7 FKTLIDTEVTVELKNDMSIRGILKSVDQ--FLNVKLENIAVVES 48
                66777799*******************9..88888888887777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       493  (0.0274974); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.38u 0.21s 00:00:00.59 Elapsed: 00:00:00.36
# Mc/sec: 790.15
//
Query:       EPX73621.1  [L=196]
Description: signal recognition particle subunit Sec65 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-21   76.5   0.2    3.6e-21   75.9   0.2    1.3  1  SRP19     SRP19 protein


Domain annotation for each model (and alignments):
>> SRP19  SRP19 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.9   0.2     2e-25   3.6e-21       2      92 ..       4      85 ..       3      87 .. 0.94

  Alignments for each domain:
  == domain 1  score: 75.9 bits;  conditional E-value: 2e-25
                EECCCCBTTS-CCCT--S-CCCSBSS--HHHHHHHHHHCTSCEEEEEEECTTSSTTCCEEEEEC-..........SS-CHHHHHHHHHHHH CS
       SRP19  2 iYPvYldskktrkeGRrvpkelavenPtaqeiaealkalglevvvepeksyPrdwanpGrVrvklkedgkevnekiknkkellkkiaellk 92
                +YP+Y+d+k++++  Rrv+k+ a+enP+a++ia++++ lg+++++ep k++P dwanpGrV + l        +++ +k+ l+k+ia+ l+
  EPX73621.1  4 VYPIYFDKKRSKEF-RRVSKKDAIENPLAKNIADVVRDLGYQCKIEPLKTHPADWANPGRVDLIL--------PEKISKRYLFKQIAKVLQ 85
                8*******998766.***********************************************999........56789*********9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       427  (0.0238162); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 1369.42
//
Query:       EPX73622.1  [L=145]
Description: histone deacetylase complex subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-16   60.8   0.2    2.7e-16   60.0   0.2    1.4  1  SAP18     Sin3 associated polypeptide p18 (SAP18)


Domain annotation for each model (and alignments):
>> SAP18  Sin3 associated polypeptide p18 (SAP18)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.0   0.2   1.5e-20   2.7e-16       8     140 .]      23     136 ..      20     136 .. 0.87

  Alignments for each domain:
  == domain 1  score: 60.0 bits;  conditional E-value: 1.5e-20
       SAP18   8 tPfLLrlF.yktgsfhrldeFsssgklpsdelqiytWkdctLrELaqllksa...lpsllpspavgtrlsFrlvypdtrrgryaskdlGsvvsgkkgse 102
                 +PfL++++   +++ h ld  +  + +p  +++iy W+++tL ELa +++++   +++++++p++   l+Fr+v+ d+ +gr  s+++G+v+ ++++  
  EPX73622.1  23 CPFLIQVYhQFDTKNHILDVLE--DVVP--SIEIYGWMNMTLYELAVFIAETtlfQQENTKHPEW--MLQFRFVFHDQFKGRPSSREMGTVCLHNPKLF 115
                 ********55566667777777..6788..7********************98888889999998..**********999***************9995 PP

       SAP18 103 aeddseeeeekerseeedadktLadlrfviGDyldvaI 140
                 +                  +k L+ + +++GD +dv+I
  EPX73622.1 116 Q-----------------GTKLLKVTGMKCGDRVDVCI 136
                 2.................34889999999999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       376  (0.0209716); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1074.95
//
Query:       EPX73623.1  [L=341]
Description: U5 snRNP-associated protein Prp18 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.9e-46  156.3   2.2    7.1e-46  155.8   0.0    2.1  2  Prp18     Prp18 domain
    3.9e-11   42.3   0.4    1.2e-10   40.8   0.4    1.9  1  PRP4      pre-mRNA processing factor 4 (PRP4) like


Domain annotation for each model (and alignments):
>> Prp18  Prp18 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   1.0      0.21   1.9e+03      10      34 ..      31      55 ..      25      76 .. 0.68
   2 !  155.8   0.0   7.9e-50   7.1e-46       2     142 ..     192     332 ..     191     333 .. 0.97

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.21
       Prp18 10 ewekeleerseeekksvegkkesat 34
                +weke e+r  e ++++e kk+++ 
  EPX73623.1 31 DWEKERERRYLEDQREMELKKQEKK 55
                5777777776666666666555443 PP

  == domain 2  score: 155.8 bits;  conditional E-value: 7.9e-50
       Prp18   2 sflkkllkewekeleerseeekksvegkkesatlkqtkedlkpLlkklkkkkleedileklveivkalqkreyvkAndaYlklaIGnaaWPiGVtmvgi 100
                 +fl++ +  w+k l+++s +e +s eg+ + ++++q+k+dl++L++ l +++l+++il+k++ei++ +q++e+vkAnd+Yl+l+IGna+WPiGVtmvgi
  EPX73623.1 192 TFLRHGIYVWDKILTSKSASELNSPEGQGQLKIFRQAKQDLETLIRLLIEDSLNDNILSKVAEICYLCQRKEFVKANDVYLQLTIGNAPWPIGVTMVGI 290
                 578888999****************************************************************************************** PP

       Prp18 101 hersarekisskkvahvlndettRkyiqalkRlltfaqkkyp 142
                 hersa+++++++  + +l+de++R+++qalkR++tf++++ p
  EPX73623.1 291 HERSAHQRLQRDPNTSILKDEKKRRCLQALKRFITFSERENP 332
                 **************************************9987 PP

>> PRP4  pre-mRNA processing factor 4 (PRP4) like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.8   0.4   1.3e-14   1.2e-10       1      28 [.     125     152 ..     125     153 .. 0.95

  Alignments for each domain:
  == domain 1  score: 40.8 bits;  conditional E-value: 1.3e-14
        PRP4   1 VrrrLRelGEPitLFGEthadRreRLrk 28 
                 V+ +LRe++EPi LFGE++++R++R  +
  EPX73623.1 125 VISKLREMKEPIKLFGESEEARLKRFFR 152
                 899**********************876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (341 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1623  (0.0905237); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 2515.00
//
Query:       EPX73624.1  [L=279]
Description: NGG1 interacting factor 3 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.4e-70  235.6   0.0    7.8e-70  235.3   0.0    1.0  1  NIF3      NIF3 (NGG1p interacting factor 3)


Domain annotation for each model (and alignments):
>> NIF3  NIF3 (NGG1p interacting factor 3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  235.3   0.0   4.4e-74   7.8e-70       2     243 ..      11     258 ..      10     262 .. 0.93

  Alignments for each domain:
  == domain 1  score: 235.3 bits;  conditional E-value: 4.4e-74
        NIF3   2 ivevleelaplelaeswDnvGlqvg..dpekevkkvllaldlteevleeAiekg.adliithHPlifkplkrlteddykkrllkkliknnislysaHtn 97 
                 + +v+e+l++++la+swDn+Gl+++   +++ +k+vll++dlte+v++eAi+++ ++ iit+HP+if++lk++t +d ++r+l +l+ ++i +ys+Ht+
  EPX73624.1  11 LKQVVESLYNPKLADSWDNTGLLLQapFSRTGAKSVLLTIDLTEKVADEAISNKlISSIITYHPIIFRGLKAITMEDSQQRSLLRLAAEGIHVYSPHTS 109
                 6799******************9996555669*********************999******************************************* PP

        NIF3  98 lDaapgGvndwlakal.....glekieplepskeekkeeeeglgrigeleepvsleelakklkkklglekvrva..gdldkkvkkvaicaGsGasliee 189
                 +Daa++Gvndwla  +      l++ +p++++     +e+eg+gr++e++ p sl+e+++++kk +gl++v+va    ld ++++v +caGsG+s++  
  EPX73624.1 110 VDAAAEGVNDWLAWGIaggknLLKSSKPIQQNAP--MSETEGYGRLCEFSCPASLREVIERAKKLTGLPYVQVAapRGLDASISSVSVCAGSGGSVL-- 204
                 *************988777655678888887654..68899*********************************755********************.. PP

        NIF3 190 akakgaDlliTGelkhhealdakekgiavidvgHyatErvflea.laelLkeklk 243
                  +  +aDl+ TGel+hh++l++++kgi+vi++gH++tEr++l++ +ae+L ++++
  EPX73624.1 205 -AGTEADLYFTGELSHHQVLALTAKGISVILCGHSNTERGYLKDvMAEKLAKAFR 258
                 .999***************************************988999999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (279 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       367  (0.0204696); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2022.41
//
Query:       EPX73625.1  [L=193]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.5e-08   33.6   0.0    4.1e-08   32.9   0.0    1.4  1  RRM_1        RNA recognition motif. (a.k.a. RRM, RBD, or RNP 
  ------ inclusion threshold ------
      0.021   13.9   0.1      0.025   13.7   0.1    1.1  1  Latrophilin  Latrophilin Cytoplasmic C-terminal region
      0.087   12.7   0.0       0.22   11.4   0.0    1.6  1  DUF3511      Domain of unknown function (DUF3511)


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.9   0.0   6.9e-12   4.1e-08       1      67 [.     111     174 ..     111     177 .. 0.94

  Alignments for each domain:
  == domain 1  score: 32.9 bits;  conditional E-value: 6.9e-12
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggr 67 
                 + ++nL+p ++ e++++ ++kfG+i+ ++++ +   + k  a V+F++  +A k  ++l+g + +g 
  EPX73625.1 111 ITIENLAPGTSSEDVSATLQKFGEITQCQVFDT---QGKVKASVRFTTFANALKVTQQLDGVTADGM 174
                 679*****************************8...*************************887775 PP

>> Latrophilin  Latrophilin Cytoplasmic C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   4.2e-06     0.025     145     197 ..      28      84 ..       8     107 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 4.2e-06
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....................... CS
  Latrophilin 145 adgsetlsarlnlddaafEKmiisElvhNnlrgrlnaker....ekerelerklpkq 197
                  +++ ++++++ n++ a+f K++ +El +N l  rln+  +    ++++e+erkl ++
   EPX73625.1  28 KKNDKKIESGANESKATFSKRVAKELKNNELFQRLNSPGKqsggASPQENERKLLNR 84 
                  455678999*************************99988866665666666666554 PP

>> DUF3511  Domain of unknown function (DUF3511)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   3.7e-05      0.22      16      29 ..     139     152 ..     135     155 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 3.7e-05
     DUF3511  16 kvYavEgKvKsSlr 29 
                 +v++++gKvK+S+r
  EPX73625.1 139 QVFDTQGKVKASVR 152
                 79***********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       688  (0.0383736); expected 358.6 (0.02)
Passed bias filter:                      480  (0.0267723); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1455.21
//
Query:       EPX73626.1  [L=218]
Description: isoamyl acetate hydrolytic enzyme Iah1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.5e-16   59.5   0.0    1.1e-15   58.5   0.0    1.4  2  Lipase_GDSL_2  GDSL-like Lipase/Acylhydrolase family
    3.2e-10   40.3   0.0    4.6e-10   39.8   0.0    1.3  1  Lipase_GDSL    GDSL-like Lipase/Acylhydrolase
  ------ inclusion threshold ------
       0.14   12.1   0.0       0.19   11.7   0.0    1.3  1  HisG           ATP phosphoribosyltransferase


Domain annotation for each model (and alignments):
>> Lipase_GDSL_2  GDSL-like Lipase/Acylhydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.5   0.0   1.8e-19   1.1e-15       1     178 [.      15     184 ..      15     185 .. 0.73
   2 ?   -2.6   0.0       1.1   6.3e+03      91     103 ..     188     200 ..     187     212 .. 0.75

  Alignments for each domain:
  == domain 1  score: 58.5 bits;  conditional E-value: 1.8e-19
                    EEESHHHH.TCTTBCCHCHHCCCCCCCHHHTT-EEEEE.EEHCCH-H..HHHHHHHH.CTGGG-T.SEEEEE--CCCCCTT--HHHHHHH..HHHH CS
  Lipase_GDSL_2   1 alGDSiTa.GygadgggrsypaylarllaarlgldvvnnlgvsGattallrllerlr.dllrlkp.dlvtiliGtNDlgrgvpaaaaaandnleel 93 
                    +lGDSiT+ G     ++++ ++ la+ +++rl  + +  +g sG+t+  +++l ++   + +++  ++v+i +GtND    +    +  ++ ++e 
     EPX73626.1  15 VLGDSITQyG----FTHGGICSELANFYQRRL--TLEA-WGLSGYTS--RHFLNYFSkLPIDIDHtRIVVIYLGTNDSQIVNGKCLCSIEE-YKEN 100
                    69******55....677777777788888888..5555.********..999999996333333369**********98888888888886.**** PP

                    HHHHCCC...G..EEECEEEEE-TTT-TTSTCCHHHHHHHHHHHHHHHHHH.....CT-EEE-HHHHHHHCCCCCGGBBTTS.SSB-HHHHH CS
  Lipase_GDSL_2  94 idalraaapga..rilvlgplpptpeaaadarelnaviaaynealrevaae.....egvpfvDlhdaladsgerladlladdglHPnaaGyr 178
                    i+++ ++ p++  +i+     +++  + +  r+ ++ ++ y+ a re+a e      + + +Dl++a+  +    ++ll  dg+H++a Gy 
     EPX73626.1 101 IKKIATKFPKTtkKIF-----VSPAATLKTLRY-ERDQEPYRYATREAATEmnlelGNTTWIDLYGATKFNL--VPELLFNDGVHLSAMGYN 184
                    *******888844555.....333333333333.455555555555555555555899999***87777765..556677777*******95 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.1
                    HHHHHHHCCC... CS
  Lipase_GDSL_2  91 eelidalraaapg 103
                    +e+i++++a++p+
     EPX73626.1 188 QEIISQIKALWPE 200
                    7899999999886 PP

>> Lipase_GDSL  GDSL-like Lipase/Acylhydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.8   0.0   7.8e-14   4.6e-10       1     199 [.      13     189 ..      13     190 .. 0.77

  Alignments for each domain:
  == domain 1  score: 39.8 bits;  conditional E-value: 7.8e-14
                  EEEEESHHHH......TTTHHHHHHHCCCCEECCCTTC.GCEEEEEEECTTHHHHHHHCCHECTTTECHHHHHCTTSEEEEE--CTCC-EECSSCTTT CS
                  xxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Lipase_GDSL   1 ivafGDSltd......GdgaatlntiqlktpknlnefdlaldrianignkgasdnelqqllnkyplkseqlkalhpdlviislGtNDsnlgkkstdaa 92 
                  +v++GDS+t+      G  +  +n +q++               ++ +++  + + +++l+  y++k  + +  h  +v+i+lGtNDs   +  + ++
   EPX73626.1  13 LVVLGDSITQygfthgGICSELANFYQRRL--------------TLEAWGLSGYTSRHFLN--YFSKL-PIDIDHTRIVVIYLGTNDS---QIVNGKC 90 
                  599******984444444444444444444..............44555555555555555..55554.9******************...99***** PP

                  CEEHHHHHHHHHHHHHHHHHHHHTTEEEEEEE-SSTCHCTCCCCHCCHHHHHHHHHHHHHHHHHHHHHCTEEEECHHHHHHHTHCCGCHCHTSSSB-H CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Lipase_GDSL  93 kkeaeeyiknlreaikelkeegapkaivvlvsppglgpqeekdakklgekgnefvgeynqrlndlaekdgfavvDlydelqglsgieqlkaDglHpse 190
                    ++eey++n+++       +  +k++v   + +   +  e d+++ +  ++e+++e+n +l+++        +Dly  +  +   e l +Dg+H s 
   EPX73626.1  91 LCSIEEYKENIKKIATKFP-KTTKKIFVSPAATLKTLR-YERDQEPYRYATREAATEMNLELGNTTW------IDLYGATKFNLVPELLFNDGVHLSA 180
                  ************9999676.344777777777777777.999******************9977766......888888888877777777******* PP

                  HHHHHHHHH CS
                  xxxxxxxxx RF
  Lipase_GDSL 191 kgyeklael 199
                   gy  l+++
   EPX73626.1 181 MGYNVLFQE 189
                  ***998876 PP

>> HisG  ATP phosphoribosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   3.1e-05      0.19      60      87 ..      95     121 ..      60     171 .. 0.65

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 3.1e-05
                 CGG.TT-.EEEEES-HHHHHHHHHHTT- CS
        HisG  60 kdlvedkgkriaTsypnlakkyfeekgl 87 
                 +++ +++ k+iaT++p+++kk f +   
  EPX73626.1  95 EEY-KENIKKIATKFPKTTKKIFVSPAA 121
                 222.33559************9977643 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       517  (0.028836); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.36
# Mc/sec: 1835.34
//
Query:       EPX73627.1  [L=377]
Description: vacuolar membrane zinc transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-41  143.1  12.1    1.4e-41  142.8  12.1    1.0  1  Zip       ZIP Zinc transporter
  ------ inclusion threshold ------
      0.021   14.3   0.2       0.06   12.8   0.2    1.8  1  SieB      Super-infection exclusion protein B


Domain annotation for each model (and alignments):
>> Zip  ZIP Zinc transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.8  12.1   1.5e-45   1.4e-41       4     326 ..       7     368 ..       4     373 .. 0.91

  Alignments for each domain:
  == domain 1  score: 142.8 bits;  conditional E-value: 1.5e-45
         Zip   4 kilaiia..ililsllgllgpllvpkiskl......lsklllslllafavGvllgtaflhLlPealealeesqleee.hth.plagllvllGflllllv 92 
                 +il++i+  ++il++ g+++ ++ +k   +       s++ l  +la ++G+ll  ++ +++ e+l+ + +  + +      +++   +++G ++++ +
  EPX73627.1   7 WILSLISncFCILGASGVWIDVIANKLLGRpaidlvNSERSLVTALATSAGILLFSSWSSVMEESLHFFLDVPMIDMfL-ArIFQLTSFFFGSVFFFGF 104
                 666666522677889999*******99999********************************************99644.26***************** PP

         Zip  93 eklltmivekksshkektpkkasssssesaakksvsndkveeseekedhvaeadtdadskeelrngkqeksesekeqas.................... 171
                  ++l+ +  k   ++ + ++++   +++ ++++s s++++++s   +   + ++++++s+++l++++    ++++ ++                     
  EPX73627.1 105 THFLHKWLRK--TNESNAEHDHFGYHNARDTSRSLSSSTHSGSASLQLSSSVHGSHCPSGTHLHERSMLLADEGDPESThppigesnpktptcecechn 201
                 **********..777777778888888999999999999999999999999***************99999888877767******************* PP

         Zip 172 .........eeedkeklaslkvraiilllglilHsfidGLAlGvssssstgislfiAvllHelpeelglgaiLlkaglsrkkav.llnllfaltaplGi 260
                          ++e++e+++s+ +++i   + ++lH++++G+ + ++s+++tg+++f+A+++H+++e++ + ++L+ a+ srkka+ +++ l++l+ p G+
  EPX73627.1 202 hfsavnsipGSEEDEHIHSVYTMGIQTAFLICLHKIPEGFITYLASTVDTGFIVFVAMTIHNMVEGFTVAYPLYLAWKSRKKAFlTAAALSSLSLPTGA 300
                 ************************************************************************************99************* PP

         Zip 261 liGilvrs...isessgaeivsgillalsaGtflYvalvellphEllnekgssslkqsllqllglllGf 326
                 +i++l+      ++    ++v+g ++a +aG++l  +l  + p E l++++s++ k+s+l++++ +lG 
  EPX73627.1 301 FIAFLLVRigaSGSFDLLNLVYGFIFASTAGMMLILSLRVIFP-EALRHDHSQNKKHSVLCFILGILGT 368
                 *****99998888889999************************.******6555555555555555554 PP

>> SieB  Super-infection exclusion protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.2   6.7e-06      0.06       3      71 ..      51     120 ..      49     123 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 6.7e-06
        SieB   3 aLiiasglllllPdslleklnlgkfleeyglwiglvflis.iayllaqvvskllaeikekikkkreqkkv 71 
                 aL+   g+ll++++s +   +l+ fl+   + ++l+ ++  ++++  +v+++++++++ k+ +k+ + + 
  EPX73627.1  51 ALATSAGILLFSSWSSVMEESLHFFLDVPMIDMFLARIFQlTSFFFGSVFFFGFTHFLHKWLRKTNESNA 120
                 678889********76666669*****************989********************99887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (377 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       649  (0.0361983); expected 358.6 (0.02)
Passed bias filter:                      315  (0.0175693); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 2580.69
//
Query:       EPX73628.1  [L=310]
Description: lectin family glycoprotein receptor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-69  234.0   0.0    1.6e-69  233.7   0.0    1.0  1  Lectin_leg-like  Legume-like lectin family
    1.3e-06   28.6   0.1    1.8e-06   28.1   0.1    1.1  1  Bact_lectin      Bacterial lectin
    5.2e-06   26.2   0.6    2.4e-05   24.0   0.6    1.8  1  Lectin_legB      Legume lectin domain
  ------ inclusion threshold ------
       0.19   11.6   0.1         13    5.6   0.0    2.3  2  GspL_C           GspL periplasmic domain


Domain annotation for each model (and alignments):
>> Lectin_leg-like  Legume-like lectin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  233.7   0.0   3.7e-73   1.6e-69       4     229 ..      27     249 ..      24     250 .. 0.96

  Alignments for each domain:
  == domain 1  score: 233.7 bits;  conditional E-value: 3.7e-73
                      EGGGECCCTSCTCTTSSBTTEEEEET-EEE.SSEEEEE-SSTTEEEEEEESS-BEESSEEEEEEEEEESS--SS-S-EEEEEEESSSSSCCSBT CS
  Lectin_leg-like   4 krehslkkPylgqgskalpnWeyggsaild.snqirltsdeqskkGslwtkspvaleswevevsFrvtgseselegdglaiwytsergkegpvF 96 
                      ++++slk Py+++g+++l +Weyggs+++d +n i+lt+d+q ++G+l+t+ p+  +s+ev ++Fr+ +++ +l+gdg+ +++t+er+k gpvF
       EPX73628.1  27 LERLSLKPPYINHGMRSL-WWEYGGSTVVDkKNGIFLTQDLQHQSGWLSTRLPIPANSFEVLFQFRISSESRNLFGDGMGLFLTEERAKSGPVF 119
                      6789**************.**********989************************************************************** PP

                      TB-SS-EEEEEEEE-S-TSCTTTSS-SSEEEEEEEESSC---GGGTTTTTESEEEE-.--BTESSEEEEEEEEETTEEEEEEETSCCSCCCTTE CS
  Lectin_leg-like  97 gskdkfdGlailldtydndngpdkknkptisamlndgsleydhekdgkaqelasCta.dfrnkdvetlikikYdknaltvlidsgllenkndyk 189
                      g++d+f+G++i++dty+n +++  +++p++++m +dg+++yd ++dgk++e+a+C+a + +++d+  l k+k+dk+ + ++ + ++ + ++d+ 
       EPX73628.1 120 GFTDNFKGYGIFFDTYNNGRSG--TVFPRVIVMQGDGKTSYDADRDGKENEIAGCSAlHLHSSDYT-LGKLKFDKKSKVLRLELAY-DASSDFI 209
                      ********************87..8********************************677777776.****************997.******* PP

                      EEEEESSEE--SSBEEEEEEEESSSGGEEEEEEEEEEEEE CS
  Lectin_leg-like 190 lCfqvkevelPtgyyfgvsaatgdlsdnhdvlsllllqlt 229
                      +Cf++++v+lP++ ++ +sa tg+ls+nh+++s+ ++++t
       EPX73628.1 210 KCFEMEDVNLPATAFLTFSAITGELSENHEIHSISSRTIT 249
                      **********************************998876 PP

>> Bact_lectin  Bacterial lectin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.1   0.1   4.1e-10   1.8e-06      21     192 ..      57     241 ..      40     245 .. 0.69

  Alignments for each domain:
  == domain 1  score: 28.1 bits;  conditional E-value: 4.1e-10
                  E.EEEEE-SSTT-EEEEEESSEEETTS-EEEEEEEE--.S...B.--EEEEEEEST----SGGGTTTTTSTT-EEEEEE-S--.....SS-EEEEEEE CS
  Bact_lectin  21 k.ivtltedkknqaGavtlknkiDlskdFtlkgsvnlg.qsnaggaDGigFalqpgqlGssGgglGigglpnafgfklDtyyN...kagkpygafvkt 113
                  k  + lt+d ++q+G ++ + +i   ++F++ +++ +  +s +  +DG+g++l + +  +sG  +G+    ++ g+ +Dty N   +   p + +++ 
   EPX73628.1  57 KnGIFLTQDLQHQSGWLSTRLPIPA-NSFEVLFQFRISsESRNLFGDGMGLFLTE-ERAKSGPVFGFTDNFKGYGIFFDTYNNgrsGTVFPRVIVMQG 152
                  247889*********8888888876.89**********8667788*********9.67799**********************855333344444444 PP

                  ............-TT-......................-SSS--EEEEEEE..-TTT...EEEETHHHT-.............SEEEEEEEEE-SSSB CS
  Bact_lectin 114 dangsletvkssssks......................ledgkwhpitisYdastkt...tvtyddgsstvsidltkkvtkgktyvafgiaastGgat 186
                  d++ s +  +++ +++                                     ++k    ++ yd  ss   + ++ + ++   + +++++a tG+ +
   EPX73628.1 153 DGKTSYDADRDG-KENeiagcsalhlhssdytlgklkfD-------------KKSKVlrlELAYD-ASSDFIKCFEMEDVNLPATAFLTFSAITGELS 235
                  444443333333.33357889988865554444444442.............4444344444444.33334444455566777788899999999988 PP

                  --EEEE CS
  Bact_lectin 187 nlqqvk 192
                   +++++
   EPX73628.1 236 ENHEIH 241
                  888775 PP

>> Lectin_legB  Legume lectin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.6   5.5e-09   2.4e-05      27     232 ..      57     244 ..      46     258 .. 0.75

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 5.5e-09
  Lectin_legB  27 sgllqLtnktsnssvGralYkkplkLwdkssgnvasFstsFvfaIssskssssgdGlAFflapspslpaasagqyLGLfnsttnnssnhivaVEfDtf 124
                  ++ + Lt++ ++ ++G+   + p+         + sF++ F f Iss++++  gdG+  fl++++    a++g  +G++ + +         + fDt+
   EPX73628.1  57 KNGIFLTQDLQH-QSGWLSTRLPI--P------ANSFEVLFQFRISSESRNLFGDGMGLFLTEER----AKSGPVFGFTDNFK---GY---GIFFDTY 135
                  555555555444.55555333333..3......469*********8889999*********9996....5589*****86654...34...555**** PP

  Lectin_legB 125 knkef.DipdnhvGidvnsvkSvksasas.......lkslslssgkkvqvwidYdsaskrlsVtlaplkeeskpkkpllsykvdLskvl.peekvyvG 213
                  +n +   +  + + ++ ++ +S  +   +          l+l+s + +    ++d++sk l   la ++  s    + +   +++++v  p  +++  
   EPX73628.1 136 NNGRSgTVFPRVIVMQGDGKTSYDADRDGkeneiagCSALHLHSSDYTLGKLKFDKKSKVLRLELA-YDA-S----SDFIKCFEMEDVNlP-ATAFLT 226
                  9976645448888888888888888655588899998899**************************.776.3....344445566666536.468899 PP

  Lectin_legB 214 FSastgsvsveahyilsWs 232
                  FSa tg++s e+h i+s s
   EPX73628.1 227 FSAITGELS-ENHEIHSIS 244
                  *******77.******987 PP

>> GspL_C  GspL periplasmic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.003        13      94     122 ..     179     207 ..     166     211 .. 0.84
   2 ?    3.6   0.0     0.012        52       5      34 ..     272     302 ..     268     307 .. 0.74

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.003
                 STT-EEEEEEEETTTTCEEEEEEESSCHH CS
      GspL_C  94 vpelelqsldYdgkrgelrlqleakdfaa 122
                  ++ +l +l++d+k + lrl+l +++ ++
  EPX73628.1 179 SSDYTLGKLKFDKKSKVLRLELAYDASSD 207
                 5678999***************9988766 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.012
                 XXX.XXXXXXXXXXXXXXXXXXXXXXXXXXX CS
      GspL_C   5 saW.rkvaillalallvvvaerllqlyqler 34 
                 s+W r+ +++l+ +++v+++ +l   +q ++
  EPX73628.1 272 SPWkRRFIFVLVTLIVVFSVFSLRSYQQKQE 302
                 7897889999999999999888776666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       587  (0.0327403); expected 358.6 (0.02)
Passed bias filter:                      544  (0.0303419); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2173.71
//
Query:       EPX73629.1  [L=553]
Description: CTD-binding SR-like protein rA9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.3e-10   41.0   4.7    1.3e-10   41.0   4.7    2.6  2  PHD           PHD-finger
    1.3e-07   31.7   7.6    1.3e-07   31.7   7.6    2.6  2  zf-rbx1       RING-H2 zinc finger domain
    3.8e-07   30.3  28.6    5.5e-05   23.4  15.5    3.3  2  zf-RING_2     Ring finger domain
      8e-05   22.4   3.9      8e-05   22.4   3.9    3.3  3  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
    0.00031   20.5   8.3    0.00031   20.5   8.3    2.8  2  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
     0.0025   17.6   2.3     0.0025   17.6   2.3    3.4  3  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
      0.004   17.2   1.1      0.004   17.2   1.1    2.5  2  zf-ANAPC11    Anaphase-promoting complex subunit 11 RING-H2 f
  ------ inclusion threshold ------
       0.01   15.6   0.3       0.01   15.6   0.3    3.3  3  zf-RING_11    RING-like zinc finger
      0.016   14.9   0.7      0.016   14.9   0.7    2.2  2  zf-PHD-like   PHD/FYVE-zinc-finger like domain
      0.017   14.7   0.9      0.048   13.2   0.9    1.8  1  PHD_2         PHD-finger
       0.22   11.2  12.6       0.19   11.3   1.9    2.7  2  Zn_ribbon_17  Zinc-ribbon, C4HC2 type
        3.1    8.0   8.3        1.6    8.9   0.8    2.6  2  Zf_RING       KIAA1045 RING finger
        3.3    7.9   9.0       0.31   11.2   0.5    2.5  2  zf-HC5HC2H_2  PHD-zinc-finger like domain
        3.6    7.5  19.3       0.19   11.6   8.1    2.9  2  Prok-RING_4   Prokaryotic RING finger family 4


Domain annotation for each model (and alignments):
>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   3.8      0.34   4.4e+02      21      35 ..      55      69 ..      49      80 .. 0.75
   2 !   41.0   4.7   9.8e-14   1.3e-10       1      50 [.     124     168 ..     124     170 .. 0.94

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.34
                TSCEEETTTSSSTHS CS
         PHD 21 CkrwfHqkClkpple 35
                C++ fH++Cl+   e
  EPX73629.1 55 CRHYFHNQCLENWCE 69
                *********987655 PP

  == domain 2  score: 41.0 bits;  conditional E-value: 9.8e-14
                 SBTTTTSTTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSSTBSSTTTH CS
         PHD   1 rCavCkkksdeeeelvqCdgCkrwfHqkClkppleseekpegewlCekCk 50 
                 rC +C++ s++++ l++CdgC++++H+ Cl+++    e+pe+e++C++C 
  EPX73629.1 124 RCVICGG-SEQQDVLLLCDGCDDAYHTFCLDLE----EVPENEFYCPNCV 168
                 6******.9**********************99....678899******6 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.7   7.6     1e-10   1.3e-07       2      55 .]      16      78 ..      15      78 .. 0.85
   2 ?    4.6   1.9     0.031        40      13      54 ..     124     167 ..     117     168 .. 0.74

  Alignments for each domain:
  == domain 1  score: 31.7 bits;  conditional E-value: 1e-10
     zf-rbx1  2 tCaiCrneleeacieckapgdee.........cpvvlGeCgHaFHlhCiskWlktrkvCPlcr 55
                +C+iC +el ++ +e   +++           + v++  C+H FH +C+++W +  ++CPlcr
  EPX73629.1 16 ECIICLSELPNCPLENWDNSSVPttlsaspngIYVATLPCRHYFHNQCLENWCEVANTCPLCR 78
                79999999988777766665554678899999999999************************8 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.031
     zf-rbx1  13 acieckapgdeecpvvlGeCgHaFHlhCis..kWlktrkvCPlc 54 
                  c+ c  ++++++ + +  C  a+H+ C++  +  +++  CP c
  EPX73629.1 124 RCVICGGSEQQDVLLLCDGCDDAYHTFCLDleEVPENEFYCPNC 167
                 688888888888999999**********8611333335557776 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4  15.5   4.3e-08   5.5e-05       2      44 .]      16      78 ..      15      78 .. 0.72
   2 !    9.2   5.1    0.0012       1.5       2      43 ..     124     167 ..     123     168 .. 0.66

  Alignments for each domain:
  == domain 1  score: 23.4 bits;  conditional E-value: 4.3e-08
   zf-RING_2  2 eCpICleel..ssads.....................vlllpCgHvfhreClerwlrssstCPlCr 44
                eC ICl+el  +                         v +lpC+H fh +Cle+w++  +tCPlCr
  EPX73629.1 16 ECIICLSELpnC---PlenwdnssvpttlsaspngiyVATLPCRHYFHNQCLENWCEVANTCPLCR 78
                677777666321...12334456667777776667645578************************9 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.0012
   zf-RING_2   2 eCpICleelssadsvlll.pCgHvfhreClerwlrssst....CPlC 43 
                  C+IC    +++d +ll+  C   +h  Cl+   ++ ++    CP+C
  EPX73629.1 124 RCVICG-GSEQQDVLLLCdGCDDAYHTFCLDL--EEVPEnefyCPNC 167
                 6****5.4445555555547*999*****844..333333368**** PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   1.0      0.74   9.5e+02       1      11 [.      16      26 ..      15      29 .. 0.70
   2 !   22.4   3.9   6.3e-08     8e-05      15      40 .]      52      77 ..      46      77 .. 0.90
   3 ?   -2.3   5.2       3.2   4.1e+03       2      40 .]     125     167 ..     124     167 .. 0.63

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.74
  zf-C3HC4_2  1 kCpiCldmlkd 11
                +C iCl +l +
  EPX73629.1 16 ECIICLSELPN 26
                58888877754 PP

  == domain 2  score: 22.4 bits;  conditional E-value: 6.3e-08
  zf-C3HC4_2 15 vtpCgHvfCqkCilrsLeekneCPlC 40
                + pC H f+++C+  + e  n CPlC
  EPX73629.1 52 TLPCRHYFHNQCLENWCEVANTCPLC 77
                56************************ PP

  == domain 3  score: -2.3 bits;  conditional E-value: 3.2
  zf-C3HC4_2   2 CpiCldmlkdpsvvt..pCgHvfCqkCilr.sLeekn.eCPlC 40 
                 C iC  + ++ + +    C   ++  C++     e++  CP C
  EPX73629.1 125 CVICGGSEQQDVLLLcdGCDDAYHTFCLDLeEVPENEfYCPNC 167
                 7888777666544434567766777776654566666799999 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   8.3   2.5e-07   0.00031       1      41 []      17      77 ..      17      77 .. 0.91
   2 ?    1.4   4.6      0.23   2.9e+02       1      41 []     125     167 ..     125     167 .. 0.67

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 2.5e-07
                -TTT-S--SS-E.......................E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4  1 CpiCleeakepn......................elleCkHsfCskCirkilksrkkvkCPlC 41
                C+iCl+e+ +                         +l+C+H f+++C++++ +   +++CPlC
  EPX73629.1 17 CIICLSELPNCPlenwdnssvpttlsaspngiyvATLPCRHYFHNQCLENWCE--VANTCPLC 77
                99999987766569999999999999999999999******************..8889**** PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.23
                 -TTT-S--SS-E...E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepn..elleCkHsfCskCirkilksrkkvkCPlC 41 
                 C iC    ++ +    + C+ ++++ C++     +++++CP+C
  EPX73629.1 125 CVICGGSEQQDVllLCDGCDDAYHTFCLDLEEVPENEFYCPNC 167
                 88888777776656667777777777765322226999****9 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.6      0.13   1.6e+02       3      14 ..      15      26 ..      13      29 .. 0.73
   2 !   17.6   2.3   1.9e-06    0.0025      15      46 ..      50      80 ..      45      84 .. 0.89
   3 ?    1.5   4.2      0.22   2.8e+02       4      43 ..     124     167 ..     121     168 .. 0.65

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.13
                SB-TTTSSSBS- CS
  zf-C3HC4_3  3 eeCviClerprn 14
                eeC+iCl++  n
  EPX73629.1 15 EECIICLSELPN 26
                789999988655 PP

  == domain 2  score: 17.6 bits;  conditional E-value: 1.9e-06
                EEETTEEEEEE-HHHHHHHHHTT-B-TTT--B CS
  zf-C3HC4_3 15 vvllpCgHlvlCeeCaekllkrkkkCpiCrrp 46
                v+ lpC+H  + ++C+e++ +  ++Cp+Cr +
  EPX73629.1 50 VATLPCRHY-FHNQCLENWCEVANTCPLCRIE 80
                6789*****.********************76 PP

  == domain 3  score: 1.5 bits;  conditional E-value: 0.22
                 B-TTTSSSBS-EEETTE...E...EEEE-HHHHHHHHHTT-B-TTT CS
  zf-C3HC4_3   4 eCviClerprnvvllpC...g...HlvlCeeCaekllkrkkkCpiC 43 
                  CviC  ++++ vll C       H+ +C + +e++ +++  Cp C
  EPX73629.1 124 RCVICGGSEQQDVLLLCdgcDdayHT-FCLD-LEEVPENEFYCPNC 167
                 7****998777666555322244366.8876.66666688888888 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   1.1   3.1e-06     0.004      51      81 ..      54      81 ..      15      85 .. 0.84
   2 ?    0.9   1.0      0.37   4.7e+02      44      77 ..     135     167 ..     121     172 .. 0.65

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 3.1e-06
                TTS-EEEHHHHHHHHHHHSTSSB-TTTSSB- CS
  zf-ANAPC11 51 kckhnfhlhcilkwletetskglcpmcrqtf 81
                 c+h fh+ c+ +w e     + cp+cr +f
  EPX73629.1 54 PCRHYFHNQCLENWCEV---ANTCPLCRIEF 81
                3*************985...568*****887 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.37
                 TS-EEEBTTS-EEEHHHHHHHHHHHSTSSB-TTT CS
  zf-ANAPC11  44 dcplvlGkckhnfhlhcilkwletetskglcpmc 77 
                 d  l+   c+ ++h+ c+    e ++ +  cp c
  EPX73629.1 135 DVLLLCDGCDDAYHTFCLD-LEEVPENEFYCPNC 167
                 33444555*********84.44566666777766 PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   2.2     0.041        52       1      10 [.      16      25 ..      16      28 .. 0.85
   2 ?   15.6   0.3     8e-06      0.01      16      29 .]      51      64 ..      44      64 .. 0.84
   3 ?   -2.6   2.4       3.7   4.7e+03       2      27 ..     125     150 ..     125     152 .. 0.56

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.041
  zf-RING_11  1 eCsICLeefk 10
                eC ICL+e+ 
  EPX73629.1 16 ECIICLSELP 25
                9******975 PP

  == domain 2  score: 15.6 bits;  conditional E-value: 8e-06
  zf-RING_11 16 filpCsHtFHfkCI 29
                 +lpC H+FH +C+
  EPX73629.1 51 ATLPCRHYFHNQCL 64
                478**********5 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 3.7
  zf-RING_11   2 CsICLeefkpgqalfilpCsHtFHfk 27 
                 C+IC  + +++  l +  C  ++H  
  EPX73629.1 125 CVICGGSEQQDVLLLCDGCDDAYHTF 150
                 99997765544444444576555555 PP

>> zf-PHD-like  PHD/FYVE-zinc-finger like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1       1.6   2.1e+03      13      31 ..      47      65 ..      40      69 .. 0.78
   2 ?   14.9   0.7   1.2e-05     0.016       1      32 [.     125     154 ..     125     208 .. 0.92

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.6
  zf-PHD-like 13 gqlvyCqGCslsyhkaClG 31
                 g  v    C + +h++Cl 
   EPX73629.1 47 GIYVATLPCRHYFHNQCLE 65
                 566677789999*****96 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 1.2e-05
  zf-PHD-like   1 CdtCaeskdeekgqlvyCqGCslsyhkaClGk 32 
                  C +C++s+  ++  l+ C GC  +yh  Cl  
   EPX73629.1 125 CVICGGSE--QQDVLLLCDGCDDAYHTFCLDL 154
                  88999988..899****************975 PP

>> PHD_2  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.9   3.8e-05     0.048       2      35 ..     135     167 ..     134     168 .. 0.94

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 3.8e-05
       PHD_2   2 npllsCdkCsvaVHasCYGvskesdgeeWlCrrC 35 
                 ++ll Cd+C  a H  C  +++ ++  e++C  C
  EPX73629.1 135 DVLLLCDGCDDAYHTFCLDLEEVPEN-EFYCPNC 167
                 689**********************8.*****99 PP

>> Zn_ribbon_17  Zinc-ribbon, C4HC2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   1.9   0.00015      0.19      17      46 ..      48      75 ..      43      80 .. 0.86
   2 ?    4.3   3.3     0.024        31       3      36 ..     121     155 ..     119     169 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00015
  Zn_ribbon_17 17 rvvlcgvCeHvlHasCarewfenddlaeCp 46
                   +v    C H  H++C+++w e  +   Cp
    EPX73629.1 48 IYVATLPCRHYFHNQCLENWCEVAN--TCP 75
                  5677788*************99998..777 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.024
  Zn_ribbon_17   3 llksCayCelav.kgrvvlcgvCeHvlHasCarew 36 
                    l  C++C  +  + +++lc  C    H+ C++ +
    EPX73629.1 121 ELTRCVICGGSEqQDVLLLCDGCDDAYHTFCLDLE 155
                   5678****87651567889************9755 PP

>> Zf_RING  KIAA1045 RING finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   1.3      0.14   1.9e+02      25      38 ..      55      68 ..      49      79 .. 0.81
   2 ?    8.9   0.8    0.0012       1.6       7      35 ..     124     153 ..     117     163 .. 0.76

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.14
     Zf_RING 25 CtkvfHegClrklg 38
                C + fH++Cl++  
  EPX73629.1 55 CRHYFHNQCLENWC 68
                7799******9855 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0012
     Zf_RING   7 lCeiCevytaee.lypCRvCtkvfHegClr 35 
                  C iC   ++++ l+ C  C+  +H+ Cl 
  EPX73629.1 124 RCVICGGSEQQDvLLLCDGCDDAYHTFCLD 153
                 49***77666552789************96 PP

>> zf-HC5HC2H_2  PHD-zinc-finger like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   2.2      0.71   9.1e+02      65      86 ..      46      65 ..       3      74 .. 0.66
   2 ?   11.2   0.5   0.00024      0.31      42      89 ..     108     156 ..      94     171 .. 0.75

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.71
  zf-HC5HC2H_2 65 kGaciqCskkeCktafHvtCal 86
                  +G+ +      C+++fH  C  
    EPX73629.1 46 NGIYVATLP--CRHYFHNQCLE 65
                  555555444..99999999965 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00024
  zf-HC5HC2H_2  42 epvd.vekikkerlkekCllCkkrkGaciqCskkeCktafHvtCalaag 89 
                    +++  +++++++  ++C++C  ++   +    + C+ a+H  C   ++
    EPX73629.1 108 ANAEvPSEFVESNELTRCVICGGSEQQDVLLLCDGCDDAYHTFCLDLEE 156
                   4444456788888899*****98855555555555*********87665 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   8.1   0.00015      0.19      11      40 ..      50      81 ..      17      87 .. 0.82
   2 ?    0.6   3.3      0.42   5.4e+02       1      17 [.     125     141 ..     125     172 .. 0.64

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00015
  Prok-RING_4 11 ailepCgHlvCkeCfdsk..dlssCPlCqrri 40
                 ++  pC H + ++C++++    ++CPlC+ ++
   EPX73629.1 50 VATLPCRHYFHNQCLENWceVANTCPLCRIEF 81
                 5678**************84455*****9776 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.42
  Prok-RING_4   1 CvlCgeqekkailepCg 17 
                  Cv+Cg +e++ +l  C 
   EPX73629.1 125 CVICGGSEQQDVLLLCD 141
                  9*****99999997774 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (553 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       779  (0.0434492); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                        24  (0.00133861); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 3820.59
//
Query:       EPX73630.1  [L=327]
Description: twinfilin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.5e-32  110.7   3.6      4e-17   62.1   0.3    2.1  2  Cofilin_ADF  Cofilin/tropomyosin-type actin-binding protein
  ------ inclusion threshold ------
        0.1   13.0   0.2       0.22   11.9   0.2    1.6  1  AAA_17       AAA domain


Domain annotation for each model (and alignments):
>> Cofilin_ADF  Cofilin/tropomyosin-type actin-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.7   0.2   3.2e-17   2.8e-13       9     120 ..      20     134 ..      13     135 .. 0.80
   2 !   62.1   0.3   4.5e-21     4e-17       2     120 ..     183     301 ..     182     302 .. 0.86

  Alignments for each domain:
  == domain 1  score: 49.7 bits;  conditional E-value: 3.2e-17
                  CTTT.SSEEEEEEECTTTEEEEEESS-.......HHHHHHHHH.HTTT-EEEEEEEEEECCSECCEEEEEEEEE--TTS-HHHHHHHHHHHHHHHHHC CS
  Cofilin_ADF   9 ksgkktkyilfkidddkeeivveeege.......tyeelreel.peseprYavydveyehddeskrsklvfIswvPdsapikqkmlyasskdalkkel 98 
                    +k +++++++i++++ + +v+++ +       ++e++r+ l  +sep +++++ +  +d       l fIs+vPdsa++++kmlyass++ l + +
   EPX73630.1  20 YTEKPIRAAVVRISNES-SFEVSDTVDkspsfesDFEKIRQVLlASSEPAFVLVHDQNRND------LLQFISYVPDSANVRNKMLYASSRSGLIRIV 110
                  4556899*******776.99998844455778889999999886789*******9665444......699**************************88 PP

                  TTSEEE..EEE-CGGCCSHHHHHH CS
  Cofilin_ADF  99 kgisve..ieatdldelteeelke 120
                  +  +++  ++a+ ++el+++++ +
   EPX73630.1 111 NMSKIDksFFASAPEELSYKSFFD 134
                  43334345***********98865 PP

  == domain 2  score: 62.1 bits;  conditional E-value: 4.5e-21
                  HHHHHHHCTTT.SSEEEEEEECTTTEEEEEESS-..HHHHHHHHHHTTT-EEEEEEEEEECCSECCEEEEEEEEE--TTS-HHHHHHHHHHHHHHHH. CS
  Cofilin_ADF   2 keafkelksgkktkyilfkidddkeeivveeege..tyeelreelpeseprYavydveyehddeskrsklvfIswvPdsapikqkmlyasskdalkk. 96 
                  ++a+++++s  +++ +lf+++d+   i +e+e+e    ++ ++ +  sepr+++y+++ +     ++sk +fI+++P ++++k++m+y+s+k a+ + 
   EPX73630.1 183 LKAIEKFRSVPQNTLFLFSVQDE--VICLEDEKEsiAASDVKSFFHPSEPRFGFYSLSKD-----EQSKHLFIYICPMQSSVKNRMVYSSCKLAFLNk 273
                  5899*****9999*******975..79999966668668888888899********9833.....478**********99***************994 PP

                  ...HCTTSEEE..EEE-CGGCCSHHHHHH CS
  Cofilin_ADF  97 ...elkgisve..ieatdldelteeelke 120
                     e+ gi+++  +e +d  ++te+e+ +
   EPX73630.1 274 vekEF-GIKIDgrLESNDSADCTEKEIHQ 301
                  55455.9999888************9975 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.2   2.4e-05      0.22      44     118 ..     138     210 ..     121     223 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 2.4e-05
                 HHHCTSHHHHHHHHHHHHHHHHHHHHHSSEEEEEE-SEEEETTEEEESSHHHHHHHH..SEEEEEE--HHHHHHH CS
      AAA_17  44 demrklpleekkelqkeaaekiaeeakkkgvlvdghprikeqagfldglpkevleelkpdaiilleadpeeiler 118
                 +e +++pl++++e ++++ e+++   ++k  lv+g   ++ ++++l+ ++k  ++++  ++++l+++++e+i+ +
  EPX73630.1 138 KETDTAPLRQDEEDRQQVDESLQSSTSQKRSLVTGSIAMELNDDALKAIEK--FRSVPQNTLFLFSVQDEVICLE 210
                 56668899****************99***********************99..8999889999999999988743 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       845  (0.0471303); expected 358.6 (0.02)
Passed bias filter:                      552  (0.0307881); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2283.51
//
Query:       EPX73631.1  [L=259]
Description: ribosomal protein subunit L17 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-22   80.9   0.1    3.4e-22   79.4   0.1    1.8  1  MRP-L46   39S mitochondrial ribosomal protein L46


Domain annotation for each model (and alignments):
>> MRP-L46  39S mitochondrial ribosomal protein L46
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.4   0.1   1.9e-26   3.4e-22       3     119 .]      32     131 ..      30     131 .. 0.86

  Alignments for each domain:
  == domain 1  score: 79.4 bits;  conditional E-value: 1.9e-26
                 EEEE-B--B--SB-----HHHHHH....HHHHHHHHHHT----HHHHTTHHHHHHHHHHH---------.....----HHHHHHHHHHHHHHS...... CS
     MRP-L46   3 ikagliLsRpPvvtrelspfEkefYkYqkellerlelefskyfyfkkgtlaelkfkelkkklterdeevardigkpdlrqererndeqeikspksyeea 101
                 +++g+iL R P++tr++s fE+++YkY++el++ l+ +++k+fyfkkg++ e+++k+++k+l  +++       +   ++e + ++e+ + +p      
  EPX73631.1  32 CSVGTILIRSPILTRTPSDFEQSVYKYNAELWNELSVPLPKDFYFKKGSVGEKDWKTKQKNLEGKESPF-----QAIFENEHKLMEENALPDP------ 119
                 79*************************************************************999655.....3334555555555555555...... PP

                 ........----S-SSTT CS
     MRP-L46 102 leedarvikpasRvTeaD 119
                         ++++R+TeaD
  EPX73631.1 120 ------STHLQPRITEAD 131
                 ......6899*******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       450  (0.025099); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1865.27
//
Query:       EPX73632.1  [L=341]
Description: SAGA complex subunit Sgf73 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.4e-31  106.6   3.0    1.4e-30  105.0   3.0    1.9  1  SCA7       SCA7, zinc-binding domain
     0.0027   17.6   0.1     0.0048   16.8   0.1    1.4  1  zf-C2HC_2  zinc-finger of a C2HC-type
  ------ inclusion threshold ------
      0.077   13.1   0.0       0.19   11.8   0.0    1.6  1  TRAF6_Z2   TNF receptor-associated factor 6 zinc finger 2
       0.37    9.3  10.9       0.49    8.9  10.9    1.3  1  Macoilin   Macoilin family
        2.3    7.9  15.5       0.26   11.0  10.9    1.7  2  DUF5349    Family of unknown function (DUF5349)


Domain annotation for each model (and alignments):
>> SCA7  SCA7, zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.0   3.0   3.8e-34   1.4e-30       5      67 ..     187     249 ..     182     250 .. 0.96

  Alignments for each domain:
  == domain 1  score: 105.0 bits;  conditional E-value: 3.8e-34
        SCA7   5 kkkkkkkkkevdvdkqCGVilpngkpCtRsLtCksHslgakraVegRskpfdvLlaeykkkkq 67 
                 kkk++k++++vdvdkqCGV+lpn+ +C+RsLtCk+Hs+++kraV+gRs+p+dvLla+++kk+q
  EPX73632.1 187 KKKNTKQRGPVDVDKQCGVLLPNNLMCARSLTCKTHSMSSKRAVPGRSQPYDVLLAACQKKNQ 249
                 899**********************************************************98 PP

>> zf-C2HC_2  zinc-finger of a C2HC-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.1   1.3e-06    0.0048       3      24 ..      79     100 ..      77     101 .. 0.94

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 1.3e-06
   zf-C2HC_2   3 vpCpkCgRsFnpdrlekHepvC 24 
                 v Cp C R F ++++e H ++C
  EPX73632.1  79 VLCPTCDRPFLSSYIEEHTAKC 100
                 67******************** PP

>> TRAF6_Z2  TNF receptor-associated factor 6 zinc finger 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   5.3e-05      0.19       4      23 ..      79      98 ..      78     100 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 5.3e-05
    TRAF6_Z2  4 VeCPQCQraFQKnqlkeHil 23
                V CP C r+F    + eH  
  EPX73632.1 79 VLCPTCDRPFLSSYIEEHTA 98
                67****************65 PP

>> Macoilin  Macoilin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9  10.9   0.00014      0.49     290     399 ..      94     219 ..      16     301 .. 0.54

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00014
    Macoilin 290 enkskskrlsksessgsesellveesvkskssssssssnknskkasagsagssnssskkhsessksvtsssssknskkqklpaGkssaalkdaaen... 385
                 e+++ +    +s + + e+++ +  ++k+++++ ++s ++ sk a+++  g+s  s+++ ++++ +v+ss+ +k ++ +k +  k+++++k+ + +   
  EPX73632.1  94 EEHTAKCIERNSLKRQAENDVPAAVNSKETATPLNASLKNGSKAAHQKLNGASGGSANQNNNNNTEVASSKRRKVEESKKST--KVNSSSKKDVGKkkn 190
                 3333322222222222333333333333333333333323333333344444444555555555555555533332222222..111111111111122 PP

    Macoilin 386 ...............slpnnqlskkdalv 399
                                 lpnn ++ ++  +
  EPX73632.1 191 tkqrgpvdvdkqcgvLLPNNLMCARSLTC 219
                 22345555555555588888885444422 PP

>> DUF5349  Family of unknown function (DUF5349)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.1       1.8   6.5e+03     113     127 ..      39      53 ..      20      60 .. 0.50
   2 ?   11.0  10.9   7.3e-05      0.26      50     130 ..     110     187 ..      91     194 .. 0.72

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 1.8
     DUF5349 113 lsaksnklnqqkvkg 127
                 +s+ s + n++k k+
  EPX73632.1  39 QSGSSDRENKYKNKE 53 
                 222223333333333 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 7.3e-05
     DUF5349  50 kynnvnryayknngnnsslndsnqaGlksinrsissasygsynnNrnvnvpsmgkqkqqkkqrlsaksnklnqqkvkgvsq 130
                  +n+v   +  +      ln s+++G k   + +++as+gs n+N n+n +  + ++  +k + s+ks k n    k+v++
  EPX73632.1 110 AENDVPAAVNSK-ETATPLNASLKNGSKAAHQKLNGASGGSANQNNNNNTEVASSKR--RKVEESKKSTKVNSSSKKDVGK 187
                 455555544444.445579****************************9966655555..6666666666666666666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (341 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1741  (0.0971052); expected 358.6 (0.02)
Passed bias filter:                      474  (0.0264376); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.59u 0.30s 00:00:00.88 Elapsed: 00:00:00.47
# Mc/sec: 2167.06
//
Query:       EPX73633.1  [L=539]
Description: tRNA pseudouridine synthase Lsp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.9e-10   39.6   0.0    1.4e-07   31.9   0.0    2.4  2  PseudoU_synth_1  tRNA pseudouridine synthase
  ------ inclusion threshold ------
       0.12   12.2   0.0       0.22   11.3   0.0    1.4  1  RecO_C           Recombination protein O C terminal
       0.13   12.2   0.0       0.25   11.2   0.0    1.5  1  RuvC             Crossover junction endodeoxyribonuclease Ruv
       0.55   10.5   4.7          3    8.2   4.7    2.3  1  Pec_lyase_N      Pectate lyase, N terminus


Domain annotation for each model (and alignments):
>> PseudoU_synth_1  tRNA pseudouridine synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.2   0.0    0.0062        28       5      66 ..      52     115 ..      48     138 .. 0.69
   2 !   31.9   0.0   3.1e-11   1.4e-07       5     103 ..     335     432 ..     332     437 .. 0.72

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.0062
  PseudoU_synth_1   5 lvGthdfgsfckqkqekkntvrtileaaieevsgeekell......vvtvkgsgFldhqVRamvgvl.f 66 
                      ++Gt + g + + ++++k+ +  +++a ++  +  +   +      +v +  ++++d++V+a ++v+ +
       EPX73633.1  52 YCGTGYHG-M-QLNPPSKTIEGDLFDAFVKAGAVSS---YnsddpkKVALARAARTDKGVHAAGNVItL 115
                      77777777.4.5777777777777777777322222...1345667999999***********999843 PP

  == domain 2  score: 31.9 bits;  conditional E-value: 3.1e-11
  PseudoU_synth_1   5 lvGthdfgsfckqkqek.kntvrtileaaiee.vsgeekellvvtvkgsgFldhqVRamvgvlfavgqgklspedvkellnakkrkkiavetap 96 
                      +vG h+f +f+  ++ + kn+ r i +++ +  +   + e++ ++v+g++F+ hq+R m+++++++ +   + + ++++ +++k   +++++ p
       EPX73633.1 335 YVGNHNFHNFTVGQAFHqKNSNRLIRSFKASDpMIIGNTEWISLKVHGQSFMLHQIRKMIALAVLMVRTGCNLNRIQDAFKKTK---VNIPKGP 425
                      9*********55555445555555555554432233345899*********************999888777777777766655...5677777 PP

  PseudoU_synth_1  97 avglvlf 103
                        gl l+
       EPX73633.1 426 GFGLLLE 432
                      7777665 PP

>> RecO_C  Recombination protein O C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   4.9e-05      0.22      89     151 ..     275     342 ..     257     346 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 4.9e-05
                 ........SSEE-TTT-SS----HHHHHHHHHTTTS-HHHHHHS---GGGHHHHHHHHHHHHHHHSS. CS
      RecO_C  89 g.....llcsecaakapagrplspetlallrlllrgdleklgelkvspeelrellrllrayleehler 151
                       +++++ +++ + + p s+ +l+l r+l +++++ l+e ++s++ lr +++ l++y+ +h  +
  EPX73633.1 275 AtdgetPVPTSEGNQSDTSTPKSDPALRLERALKNAEMQLLKEYRISQNRLRVIRETLDCYVGNHNFH 342
                 0334456888899999999999******************************************9766 PP

>> RuvC  Crossover junction endodeoxyribonuclease RuvC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   5.5e-05      0.25      38      80 ..     321     363 ..     308     402 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 5.5e-05
                 HHHHHHHHHHHHHHHHHHH--SEEEEEE-S----HHHHHHHHH CS
        RuvC  38 lserlkavfdaveelldayepdalaieqvffaknvdsvlklaq 80 
                 +++rl+++ +++++ + +++ + +++ q f +kn++  ++  +
  EPX73633.1 321 SQNRLRVIRETLDCYVGNHNFHNFTVGQAFHQKNSNRLIRSFK 363
                 689*******************************998876655 PP

>> Pec_lyase_N  Pectate lyase, N terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   4.7   0.00067         3       7      45 ..     211     248 ..     208     294 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00067
  Pec_lyase_N   7 EyWkkRaeeAkkaaleaYepnPleVtdhFneevnealeg 45 
                  E+W k +e  +   +eaY+++P++ ++ F ++   a   
   EPX73633.1 211 EFWDKYKE-MEDTIMEAYNADPENFVNPFSKKAAAAAAS 248
                  56665544.467889***************999885443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (539 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1163  (0.064867); expected 358.6 (0.02)
Passed bias filter:                      709  (0.0395449); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.62u 0.23s 00:00:00.85 Elapsed: 00:00:00.40
# Mc/sec: 4082.57
//
Query:       EPX73634.1  [L=608]
Description: Ku domain-containing protein Pku70 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.2e-52  177.1   0.1    8.5e-52  176.1   0.1    1.5  1  Ku_N      Ku70/Ku80 N-terminal alpha/beta domain
    5.6e-38  130.7   0.0    1.2e-37  129.7   0.0    1.5  1  Ku        Ku70/Ku80 beta-barrel domain
    2.5e-21   76.2   2.3    3.8e-21   75.6   1.4    1.8  2  Ku_C      Ku70/Ku80 C-terminal arm
    1.2e-10   40.9   0.3    2.9e-10   39.7   0.3    1.7  1  SAP       SAP domain
     0.0037   16.9   0.5      0.016   14.9   0.5    2.1  1  HeH       HeH/LEM domain
  ------ inclusion threshold ------
      0.033   14.9   0.1       0.19   12.4   0.0    2.3  2  VWA_2     von Willebrand factor type A domain


Domain annotation for each model (and alignments):
>> Ku_N  Ku70/Ku80 N-terminal alpha/beta domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  176.1   0.1   2.9e-55   8.5e-52       1     220 []      21     238 ..      21     238 .. 0.99

  Alignments for each domain:
  == domain 1  score: 176.1 bits;  conditional E-value: 2.9e-55
                 EEEEEEE-SHHHHCTTCCSCC.HHHHHHHHHHHHHHHHHHCTCSEEEEEEEESSSSTBSTTTCTTEEEEEECCCHHHHHHHHHHCCHHHCCHHHHCCCT CS
        Ku_N   1 avvfviDvspaMfesskeees.pfelalkciaellkrkvisrskDlIavvlygtdesenkeqlenitvlreldlpdaellkelkqivesedasveglae 98 
                 a++fv++vsp+M+e+++e ++ ++++al c ++l++++vi++++D ++++lygt++s  + ++en+  l +ld pdae+lk l+ + +++d  +++++ 
  EPX73634.1  21 AILFVVEVSPSMLEPVDEFTPcSLQMALICAYQLAAQRVITNPNDVMGILLYGTESS--TGRFENQQILLDLDPPDAERLKILQTYQKEFDSYKKNFKP 117
                 79*******************************************************..8*******************************9******* PP

                 TSS-TTHHHHHHHHHHHHHHTTSSESEEEEEEEESSSSTCCGHHHHHHHHHHHHHHHHHHCTEEEEEEEC.TSSSCECCTCHHHHCHCHHHHHHHHHHH CS
        Ku_N  99 dssqasllsaLivclellqkvgkklskkriflftdlddpfedsdklelilqklkakDlrderieldllkL.kkakkfdinefykdiiklgsdevkevml 196
                 +ssq sl+++L+++++l++ ++++  +kr+fl+td+d p++++ +  +ilq+  a+Dl+d ++++++++L +++++f+ n fy+d++++ +d+++  +l
  EPX73634.1 118 CSSQVSLSNVLYHASVLFT-TKAQKYEKRLFLITDNDLPAWNEMEKGIILQR--AQDLKDLEVQVNPIFLdPPTNSFRVNVFYSDFLYIIYDRQDVSNL 213
                 *******************.9999999*************************..****************999************************** PP

                 CCCSG.EHHHHHHHHHHHCSCS-EC CS
        Ku_N 197 slege.kleellaklkakkkakRal 220
                 +++g+ +l+ +l++++a +k kRa+
  EPX73634.1 214 VNRGQsQLQGMLNMITALQKPKRAH 238
                 ***********************97 PP

>> Ku  Ku70/Ku80 beta-barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.7   0.0   3.9e-41   1.2e-37       2     182 ..     246     431 ..     245     449 .. 0.89

  Alignments for each domain:
  == domain 1  score: 129.7 bits;  conditional E-value: 3.9e-41
          Ku   2 gggvsipVklykateeakkpkfkkldketne..pvkvetkyvcsdtge.vdeedivkgyeyGgevvpltkeelekiksfdskglkllgFvplseilkey 97 
                 g+gv+i++++y + ++ +++k ++++++++   + + ++k v+ dt++ +++++i++++ yGg+ ++++++ l++i+sf++++l+++gF+++s  lk++
  EPX73634.1 246 GKGVRIEIQVYILLKRLESVKTSWVYAKGERlaIATPQSKQVSFDTKKeLKRSEIKRSFTYGGSSIVFDPDNLAEIRSFGQPVLRIIGFRDAST-LKPW 343
                 89****************************9886677899999999666*****************************99************76.**** PP

          Ku  98 lsikssyfiyPddkdekgstkafsaLveamleskkvaivrfvlrskskprlvaLvPqeeelsseee......ke.glvlvtLpfaddiRslk 182
                 +s k++ fi P ++++ g+  +fsaL++++l s+ ++i++f+ r +s+p++va +P+ + ++   +       + g+ l +Lp addiRsl+
  EPX73634.1 344 HSLKPAIFIRPIENTIRGGGAVFSALHKKLLNSNSIGIAWFIARPNSNPSFVAMIPTGS-ST---HirkdfeLPvGIFLLQLPTADDIRSLP 431
                 *********************************************************33.33...1345899555**************554 PP

>> Ku_C  Ku70/Ku80 C-terminal arm
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0         6   1.8e+04      43      58 ..     100     115 ..      90     120 .. 0.58
   2 !   75.6   1.4   1.3e-24   3.8e-21       2      67 ..     459     536 ..     458     561 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 6
                 HHHH-....HHHHHHH CS
        Ku_C  43 idkragslleewkelf 58 
                 i +  ++  +++k++f
  EPX73634.1 100 ILQTYQKEFDSYKKNF 115
                 3344445555555555 PP

  == domain 2  score: 75.6 bits;  conditional E-value: 1.3e-24
                 --GGG---HHHHHHHHHHHHHHTT---..---SS--HHHHHHHHH-....HHHHHHHHHHHHH..............H CS
        Ku_C   2 ydpskfpNPsLqrhykiLqalAldedlpeeledktlpkyeaidkragslleewkelfeleeedke............k 67 
                 y+p +++NP Lq+hyk+LqalAld ++p+++ d+tlpky+ai+kr+g+ + e++e + + ++d +             
  EPX73634.1 459 YEPGRYNNPTLQWHYKVLQALALDDEIPNDFVDTTLPKYKAIQKRVGNSIREFNEILNQSNDDTStmkneedldmntV 536
                 99***********************************************************99764433333333331 PP

>> SAP  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.7   0.3   9.6e-14   2.9e-10       1      34 [.     571     604 ..     571     605 .. 0.94

  Alignments for each domain:
  == domain 1  score: 39.7 bits;  conditional E-value: 9.6e-14
                 HTT--HHHHHHHHHHTT--TTS-HHHHHHHHHHH CS
         SAP   1 lskltVaeLKeeLkkrGLptsGkKaeLieRLkey 34 
                 l+ l+V++LKe+L+ r+L+++GkKa+L+  L+ y
  EPX73634.1 571 LKALKVPQLKEILRDRSLRSTGKKADLVTNLVAY 604
                 689**************************99877 PP

>> HeH  HeH/LEM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.5   5.4e-06     0.016       2      30 ..     572     598 ..     571     601 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 5.4e-06
         HeH   2 ksLtVaqLRriLvehgveyPsnaKKadLv 30 
                 k L+V+qL++iL        s+ KKadLv
  EPX73634.1 572 KALKVPQLKEILRDRS--LRSTGKKADLV 598
                 67***********996..56********9 PP

>> VWA_2  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   6.2e-05      0.19       1     105 [.      22     151 ..      22     153 .. 0.77
   2 ?   -3.2   0.0       4.4   1.3e+04      11      88 ..     214     231 ..     206     240 .. 0.45

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 6.2e-05
       VWA_2   1 lvfvlDtSgSmrng..dygptrleaakdaveallksl....pgdrvglvtfsdgp........evlipl........t...kdkakilnalrnleakgg 74 
                 ++fv+ +S Sm ++  +++p  l++a   + +l +++    p+d +g++ +++++        ++l++l        +   + +++++++ +n ++++ 
  EPX73634.1  22 ILFVVEVSPSMLEPvdEFTPCSLQMALICAYQLAAQRvitnPNDVMGILLYGTESstgrfenqQILLDLdppdaerlKilqTYQKEFDSYKKNFKPCSS 120
                 68*********9994333677888887777777776677769**********975456666657777774444433314435588889999999999** PP

       VWA_2  75 gtnlaaaLqlarkalkkrrkgekrvivlitD 105
                 + +l + L +a+ ++  + ++++++++litD
  EPX73634.1 121 QVSLSNVLYHASVLFTTKAQKYEKRLFLITD 151
                 ************999888889*********9 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 4.4
       VWA_2  11 mrngdygptrleaakdaveallkslpgdrvglvtfsdgpevlipltkdkakilnalrnleakgggtnlaaaLqlarka 88 
                 +++                                                            g+++l+  L++ +++
  EPX73634.1 214 VNR------------------------------------------------------------GQSQLQGMLNMITAL 231
                 222............................................................444444444443333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (608 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       827  (0.0461264); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.61u 0.29s 00:00:00.89 Elapsed: 00:00:00.47
# Mc/sec: 3897.14
//
Query:       EPX73635.1  [L=374]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.5e-24   85.1  10.6    0.00011   22.9   0.2    6.5  6  WD40          WD domain, G-beta repeat
    2.8e-05   23.0   7.2       0.53    8.9   0.0    3.8  4  Nup160        Nucleoporin Nup120/160
     0.0028   17.9   0.4        6.6    7.1   0.1    3.4  4  ANAPC4_WD40   Anaphase-promoting complex subunit 4 WD40 domai
  ------ inclusion threshold ------
      0.068   13.3   0.0       0.16   12.1   0.0    1.6  1  Peptidase_M7  Streptomyces extracellular neutral proteinase (


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.2   3.6e-08   0.00016       5      38 .]      79     118 ..      75     118 .. 0.89
   2 !   15.9   0.0     4e-06     0.018       1      38 []     122     160 ..     122     160 .. 0.85
   3 ?    5.0   0.0     0.011        50       3      37 ..     168     203 ..     166     204 .. 0.72
   4 !   11.7   0.0   8.4e-05      0.38       9      38 .]     220     251 ..     211     251 .. 0.85
   5 !    8.7   0.0   0.00077       3.5      10      38 .]     264     292 ..     257     292 .. 0.82
   6 !   22.9   0.2   2.4e-08   0.00011       1      38 []     296     332 ..     296     332 .. 0.83

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 3.6e-08
                 EEEESS.SSEEEEE.....EETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGH.ssvtsla.....fspdgawlasGsdDgtvriWd 38 
                 + ++GH ++vt+++      ++  ++l +Gs+D t++ W+
  EPX73635.1  79 KLYKGHgGPVTCCQveslmGDDKDRFLYTGSWDSTIKKWN 118
                 5699**888*99999***99999999*************8 PP

  == domain 2  score: 15.9 bits;  conditional E-value: 4e-06
                 TEEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 
                 g+c+ tl GHs+ v sl    +  +l+sGs D t+ +Wd
  EPX73635.1 122 GECVETLLGHSDyVKSLLLFEEEGLLISGSVDATLAVWD 160
                 689*******556****96666666789**********9 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.011
                 EEEEEESSSS.EEEEEEETTSSEE.EEEETTSEEEEE CS
        WD40   3 clrtltGHss.vtslafspdgawl.asGsdDgtvriW 37 
                 +l++l+GHs  +  +  +p ++ + ++Gs   ++r W
  EPX73635.1 168 LLYKLSGHSRgIEKITRQPGSNVFwTCGS-ESSIRRW 203
                 6899****445776666666666667888.9999987 PP

  == domain 4  score: 11.7 bits;  conditional E-value: 8.4e-05
                 SS.SSEEEEE...EETTSSEEEEEETTSEEEEEE CS
        WD40   9 GH.ssvtsla...fspdgawlasGsdDgtvriWd 38 
                 GH s+v+sl     +p++ w  ++s D+tvr W+
  EPX73635.1 220 GHqSNVYSLLfeaEDPESMW--TASADKTVRQWS 251
                 99777**9*98888999999..6777*******5 PP

  == domain 5  score: 8.7 bits;  conditional E-value: 0.00077
                 S.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  10 H.ssvtslafspdgawlasGsdDgtvriWd 38 
                 H ++ t++ + ++g+   ++++D +vr+W+
  EPX73635.1 264 HpDFCTDVLVLSNGNVC-TACRDENVRLWN 292
                 76668999999999996.5666*******8 PP

  == domain 6  score: 22.9 bits;  conditional E-value: 2.4e-08
                 TEEEEEEESS.SSEEEEEEETTSSE...EEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgaw...lasGsdDgtvriWd 38 
                 g++ ++++GH  svt l      +w   l+s+s Dgt+r+W+
  EPX73635.1 296 GNLEHVYSGHyESVTKL-----LQWkscLISASLDGTIRVWN 332
                 57789*****999*988.....555555789999*******8 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.0   0.00012      0.53     230     255 ..     102     127 ..      89     136 .. 0.89
   2 ?   -1.4   0.0      0.15   6.7e+02     235     250 ..     240     255 ..     231     270 .. 0.83
   3 !    7.2   0.2   0.00037       1.6     232     248 ..     278     294 ..     265     305 .. 0.82
   4 !    8.7   0.1   0.00014      0.61     229     259 ..     315     345 ..     296     364 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00012
                 TTEEEEEETT-EEEEEETTTTEEEEE CS
      Nup160 230 qtylfalsrdgkLrvWnlltgkclat 255
                 + +l++ s d +++ Wn++tg c++t
  EPX73635.1 102 DRFLYTGSWDSTIKKWNVRTGECVET 127
                 67999*******************98 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.15
                 EEETT-EEEEEETTTT CS
      Nup160 235 alsrdgkLrvWnlltg 250
                 ++s d+++r W++  g
  EPX73635.1 240 TASADKTVRQWSVYEG 255
                 8899*******99765 PP

  == domain 3  score: 7.2 bits;  conditional E-value: 0.00037
                 EEEEEETT-EEEEEETT CS
      Nup160 232 ylfalsrdgkLrvWnll 248
                  +++++rd ++r+Wn++
  EPX73635.1 278 NVCTACRDENVRLWNVN 294
                 59*************97 PP

  == domain 4  score: 8.7 bits;  conditional E-value: 0.00014
                 TTTEEEEEETT-EEEEEETTTTEEEEEEE-- CS
      Nup160 229 gqtylfalsrdgkLrvWnlltgkclatidll 259
                  ++ l ++s+dg++rvWnl+  ++    ++ 
  EPX73635.1 315 WKSCLISASLDGTIRVWNLDLSSISNETNMA 345
                 577899*************988777666666 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.32   1.4e+03      61      86 ..      66      90 ..      58      95 .. 0.77
   2 !    6.5   0.0    0.0022        10      39      81 ..      91     133 ..      76     144 .. 0.84
   3 ?   -2.7   0.0       1.8   7.8e+03      40      70 ..     224     255 ..     218     259 .. 0.63
   4 !    7.1   0.1    0.0015       6.6      54      90 ..     280     316 ..     274     318 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.32
  ANAPC4_WD40 61 evrlldaesgkvvhslsvksekavtc 86
                  +rl+d ++gk+ + ++ +    vtc
   EPX73635.1 66 VCRLYDLNDGKTCKLYKGHGGP-VTC 90
                 589********99998877764.776 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0022
  ANAPC4_WD40  39 sevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                   +v+sL+   ++++L  +  d++++  ++ +g++v++l  +s+
   EPX73635.1  91 CQVESLMGDDKDRFLYTGSWDSTIKKWNVRTGECVETLLGHSD 133
                  6899999999**************************9977776 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 1.8
  ANAPC4_WD40  40 evrsLaWkp.dgklLavaysdgevrlldaesg 70 
                  +v sL ++  d + +  a +d +vr  ++++g
   EPX73635.1 224 NVYSLLFEAeDPESMWTASADKTVRQWSVYEG 255
                  55555555313456667777777777777765 PP

  == domain 4  score: 7.1 bits;  conditional E-value: 0.0015
  ANAPC4_WD40  54 avaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  + a+ d +vrl +++ g++ h +s + e+  + l+W+
   EPX73635.1 280 CTACRDENVRLWNVNLGNLEHVYSGHYESVTKLLQWK 316
                  789***********************99877778997 PP

>> Peptidase_M7  Streptomyces extracellular neutral proteinase (M7) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   3.5e-05      0.16      66     114 ..      43      92 ..      23     104 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 3.5e-05
  Peptidase_M7  66 ifldyaqnqqydstrvtahetghvlglpdtysgpcselmsg.ggpgpsct 114
                   i ld +  ++y+  rv + e+ hv  l d   g   +l  g ggp   c 
    EPX73635.1  43 IELDRTTPKRYQLPRVFTCEASHVCRLYDLNDGKTCKLYKGhGGPVTCCQ 92 
                   668999999*************************9999988466666664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (374 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       485  (0.0270511); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 2418.71
//
Query:       EPX73636.1  [L=517]
Description: membrane transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.9e-25   87.5  41.3      1e-22   80.6  28.0    2.1  2  MFS_1     Major Facilitator Superfamily
    1.1e-06   27.9  10.4    1.1e-06   27.9  10.4    3.2  2  Sugar_tr  Sugar (and other) transporter
  ------ inclusion threshold ------
        5.6    7.1   8.9       0.17   12.0   0.5    2.8  3  DUF4079   Protein of unknown function (DUF4079)


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.6  28.0   1.7e-26     1e-22      16     310 ..      96     416 ..      77     423 .. 0.73
   2 !   12.6   5.3   7.9e-06     0.047     103     179 ..     427     502 ..     424     512 .. 0.86

  Alignments for each domain:
  == domain 1  score: 80.6 bits;  conditional E-value: 1.7e-26
       MFS_1  16 gpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalg.lllllfasslwlllvlrvlqGlgagalfpagaaliadw 113
                 ++ +++ ++e+ ++s ++  l  +++ lg a++ l+lG+lsd +Gr+ v++ +ll+++ + + ++l a++++ l+++ ++ G+ +++ ++++a  +ad+
  EPX73636.1  96 YSGVSSKVSEEWNLSSQTSLLGQSMFLLGIALGPLVLGPLSDLVGRKFVYIGSLLVYICFnISCAL-AINYPQLVISMFILGAVGSTTLANVAGGVADL 193
                 233333789999999999999***************************************544444.7******************************* PP

       MFS_1 114 fpkeergraigllsagfslGailgpllgglla..sslgWravfyilaivsllafvlfllll.........peepperkrkspkeeekgtgpaplvp... 198
                    e+ + ++ ++ +++   + +g + g +++    lgWr++++i+ iv+ +++++  l +         +e + +r++++p+           +p   
  EPX73636.1 194 LRSEHSNWGM-YMFIFMCSVSSIGSPMGTAVSenPKLGWRWLYWINVIVGGFFLLV--LAFspetlpvivVEQYEARRNNKPISM---------FPrlt 280
                 ***8888777.444455555578889999998556788**************9664..555344444444333333333333333.........22331 PP

       MFS_1 199 ..............awkallkdpvlw.illialllfffgfsglltllplylqevlgls..glllaglllallalvgail.allagrlsdr.......lg 272
                               a+k++l+ p +  + ++  +++++ +++l +  p+y  + +++s  +  ++++l a++a++++    +l ++l +r         
  EPX73636.1 281 fkalfkntyfilsmALKIFLTEPIVTsLGVYNGFINGLLYFFLQAIWPVY-SDIYKMSdiA-ASSTYLAAIPACIILLWlEPLQSWLYRRdkrnnrkSR 377
                 11233335555566666666666554779999999999999999999***.********75.5555555555555555559*******99888886656 PP

       MFS_1 273 rrrrlllallllllaalglallavtssavllllvlvl.i 310
                 ++ r +++++l+  + +g++l+a++++++++++v+++ +
  EPX73636.1 378 PEARFIMTIALVWGFPIGIFLFAFSTKPTIHYIVSLIaL 416
                 69999999999999999********88888887655523 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 7.9e-06
       MFS_1 103 fpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpeepper 179
                 + a++ +i+d +p    ++a++ + + ++lG  +   l++l+ s  + +++  ++++vsl ++ l+++l++  ++ r
  EPX73636.1 427 WQAMLLYITDSYPS-VSASAVAAFELPSNLGGTIFVHLSALMFSRMNIHWATAVVGFVSLPLIALIYILYYFGNRIR 502
                 789999*******9.***********************************************996666665444433 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9  10.4   1.8e-10   1.1e-06      43     194 ..     104     255 ..      74     272 .. 0.71
   2 ?   -7.7   8.7         3   1.8e+04     323     433 ..     383     495 ..     377     499 .. 0.57

  Alignments for each domain:
  == domain 1  score: 27.9 bits;  conditional E-value: 1.8e-10
                 H........HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCH CS
    Sugar_tr  43 e.....ssvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvGigvGlasvlvPmyisEiApkklR 136
                 +     ss +s l  s+fl+G ++G l++g+l+d +GRk +++ + ++++  ++ +a+a    ++ +l+++ +++G      s++    ++ +A     
  EPX73636.1 104 SeewnlSSQTSLLGQSMFLLGIALGPLVLGPLSDLVGRKFVYIGSLLVYICFNISCALAI---NYPQLVISMFILGAV---GSTTLANVAGGVADLLRS 196
                 123444666778999*********************************************...9************63...355555556666644333 PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHHTSS-.TTHHHHHHHCCHHHHHHHHHHGGGS--- CS
    Sugar_tr 137 galvslyqlaitfGilvaaifglglnktsn.adgwrillglqlvpallllilllflPES 194
                         ++i +  + ++++ +g++ ++n + gwr+l +++++   ++l++l f PE+
  EPX73636.1 197 EHSNWGMYMFIFMCSVSSIGSPMGTAVSENpKLGWRWLYWINVIVGGFFLLVLAFSPET 255
                 333333444455555555555566655555669*************************9 PP

  == domain 2  score: -7.7 bits;  conditional E-value: 3
                 HHHHHHHHHHHHH..HHHHTTSS...CHHH.HHHHHHHHHHHHTTTTHHHHHHHHHHSHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH....T- CS
    Sugar_tr 323 Gaagmaicfvilgivalllvakskaasiva.ivfialfialfalgwgpvpwvlvsElfpqsvRskalaiavavnwlanflisllfpiiteaig....gg 416
                  ++++++  + +gi  +++++k +   iv+ i+++++ ia +   w  ++ +++++ +p+   s+++a+   +n   ++++ l    ++++++     +
  EPX73636.1 383 IMTIALVWGFPIGIFLFAFSTKPTIHYIVSlIALTMFNIADYH-IWQAML-LYITDSYPSVSASAVAAFELPSNLGGTIFVHLS-ALMFSRMNihwaTA 478
                 4555666666666666666666655555541555555566666.455555.566799988888888888888777666666544.34444444224455 PP

                 HHHHHHHHHHHHHHHHH CS
    Sugar_tr 417 yvflvfaglavlfiifv 433
                 +v++v   l +l +i  
  EPX73636.1 479 VVGFVSLPLIALIYILY 495
                 55555555555555544 PP

>> DUF4079  Protein of unknown function (DUF4079)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.5   2.8e-05      0.17      43     104 ..     191     254 ..     134     258 .. 0.87
   2 ?   -1.5   0.5      0.42   2.5e+03     103     103 ..     398     398 ..     318     431 .. 0.60
   3 ?   -3.2   0.1       1.4   8.3e+03      13      30 ..     487     504 ..     474     510 .. 0.67

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.8e-05
     DUF4079  43 pkkvrdeHvklgslllllvv.lgaigglvllylrrg.klfpssHlyaGlavvvLlalsaalvpe 104
                 ++ +r+eH ++g  +++++  + +ig+++++ + ++ kl + + +++ ++v ++ +l +a +pe
  EPX73636.1 191 ADLLRSEHSNWGMYMFIFMCsVSSIGSPMGTAVSENpKLGWRWLYWINVIVGGFFLLVLAFSPE 254
                 556899*********9998725578999***9988868*************9999999999887 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.42
     DUF4079 103 p 103
                  
  EPX73636.1 398 L 398
                 1 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 1.4
     DUF4079  13 vfpllgavaylGwqtrqr 30 
                 +++l+++  y+G ++r r
  EPX73636.1 487 LIALIYILYYFGNRIRSR 504
                 445666667888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (517 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       793  (0.04423); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.27s 00:00:00.92 Elapsed: 00:00:00.45
# Mc/sec: 3431.96
//
Query:       EPX73637.1  [L=195]
Description: hypothetical protein SOCG_02855 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.7e-16   58.0   0.1      3e-12   46.3   0.0    2.1  2  MMU163    Mitochondrial protein up-regulated during meiosis


Domain annotation for each model (and alignments):
>> MMU163  Mitochondrial protein up-regulated during meiosis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.3   0.0   1.7e-16     3e-12      17      81 ..      46     109 ..      36     137 .. 0.91
   2 !   10.0   0.0   1.9e-05      0.34     195     226 ..     148     179 ..     140     188 .. 0.86

  Alignments for each domain:
  == domain 1  score: 46.3 bits;  conditional E-value: 1.7e-16
      MMU163  17 eRilkLGktlriLserLPtlLvnpLPqeiLsPsitLhLfPsthPhLPtvkGrvaYraalWtaPva 81 
                   ++++Gkt+ iL++r+P l +++LP+e+Ls +i+L+LfP  h +LP+++G v Y+  + ta v 
  EPX73637.1  46 TNNVEIGKTITILQDRVPLLPQKALPDEVLSRNIQLNLFPY-HLNLPKIEGLVIYKFVFKTARVL 109
                 56899***********************************5.*************9999988775 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 1.9e-05
      MMU163 195 ekeeeftGlfifefDeeGRiathtiehadeak 226
                 ++ +e+  +f f+ +++G i  h+ie+ + +k
  EPX73637.1 148 SHTDEYDCIFHFDINSKGLIYRHVIENLERKK 179
                 678999********************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       372  (0.0207485); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.30s 00:00:00.74 Elapsed: 00:00:00.47
# Mc/sec: 1259.32
//
Query:       EPX73638.1  [L=515]
Description: Cdc20/Fizzy family WD repeat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.2e-14   53.5   1.1    1.2e-05   25.6   0.0    5.2  6  ANAPC4_WD40   Anaphase-promoting complex subunit 4 WD40 domai
    1.3e-12   48.0   9.3      0.008   17.0   0.0    6.4  7  WD40          WD domain, G-beta repeat
      1e-06   28.8   2.8     0.0085   16.0   0.0    4.2  5  eIF2A         Eukaryotic translation initiation factor eIF2A
     0.0031   16.5   0.1       0.25   10.3   0.0    2.7  3  Ge1_WD40      WD40 region of Ge1, enhancer of mRNA-decapping 
  ------ inclusion threshold ------
      0.016   14.1   0.1      0.027   13.4   0.1    1.3  1  PALB2_WD40    Partner and localizer of BRCA2 WD40 domain
      0.021   14.8   1.8      0.069   13.1   0.2    2.7  2  TFIIIC_delta  Transcription factor IIIC subunit delta N-term
      0.052   12.9   0.0        1.4    8.2   0.0    2.5  2  WD40_like     WD40-like domain
       0.12   10.3   0.2       0.38    8.7   0.1    1.8  2  IKI3          IKI3 family


Domain annotation for each model (and alignments):
>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.44   9.9e+02      38      66 ..     167     193 ..     157     207 .. 0.68
   2 !   25.6   0.0   5.1e-09   1.2e-05      33      90 ..     202     259 ..     176     261 .. 0.87
   3 !    9.0   0.0   0.00074       1.7      37      76 ..     249     288 ..     246     292 .. 0.86
   4 !   16.6   0.1   3.3e-06    0.0073       1      81 [.     256     338 ..     256     351 .. 0.79
   5 !    7.3   0.0    0.0025       5.6      41      90 ..     340     390 ..     334     392 .. 0.74
   6 ?    2.0   0.0      0.12   2.7e+02      46      67 ..     454     474 ..     405     492 .. 0.73

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.44
  ANAPC4_WD40  38 dsevrsLaWkpdgklLavaysdgevrlld 66 
                  d  ++ LaW++ g+ Lava  + +v l d
   EPX73638.1 167 DFYISPLAWSNHGE-LAVALRQ-HVYLWD 193
                  556889*******9.5666543.455555 PP

  == domain 2  score: 25.6 bits;  conditional E-value: 5.1e-09
  ANAPC4_WD40  33 eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  e  ++d  v+sLa++ dg+ La+a  +g+v++ d +  +  h++  ++e  ++c+ W+
   EPX73638.1 202 EMRHTDYVVSSLAYSADGNYLAIARVNGSVEIWDRQYLTETHEYCFQHEGDISCMAWS 259
                  44778999************************************999999*******7 PP

  == domain 3  score: 9.0 bits;  conditional E-value: 0.00074
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhsl 76 
                  +++ ++++aW+p  + L v+ s g++ +++  +  + + +
   EPX73638.1 249 HEGDISCMAWSPTSSTLLVGGSMGSIYVYHKTKSMMCRLY 288
                  67899************************99887776655 PP

  == domain 4  score: 16.6 bits;  conditional E-value: 3.3e-06
  ANAPC4_WD40   1 lswcptmDLiAlatedgellvfRlng...qrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  ++w+pt   + ++ + g+++v+        r++t+ ++ ++++v +L+W+ dg+ +a + +d+ v ++d+ + +  + +  +s 
   EPX73638.1 256 MAWSPTSSTLLVGGSMGSIYVYHKTKsmmCRLYTI-KHVHQEQVCGLEWNYDGTQFASGGNDNLVCVFDMDTLDAPKYFWSHSA 338
                  78999999999999999999987655233577777.899****************************99988766665555554 PP

  == domain 5  score: 7.3 bits;  conditional E-value: 0.0025
  ANAPC4_WD40  41 vrsLaWkp.dgklLavaysdg..evrlldaesgkvvhslsvksekavtclgWg 90 
                  v+++a+ p + ++La+++  +  ++ ++d   g+++++l ++++  +t++ W+
   EPX73638.1 340 VKAVAFCPwQKSILAIGTGSNdqHIYFYDTFRGHLISKLFCGAQ--ITSIIWS 390
                  5555555523457787765443389999**************99..******8 PP

  == domain 6  score: 2.0 bits;  conditional E-value: 0.12
  ANAPC4_WD40  46 WkpdgklLavaysdgevrllda 67 
                  W ++g++++va  d +v+++++
   EPX73638.1 454 W-EEGEFIVVANTDQTVKFYKI 474
                  5.4799***********99986 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       3.1     7e+03      31      38 .]     186     193 ..     173     193 .. 0.60
   2 !   17.0   0.0   3.6e-06     0.008      10      38 .]     205     235 ..     197     235 .. 0.88
   3 !   10.3   0.1   0.00046         1       9      29 ..     248     269 ..     239     278 .. 0.79
   4 !   13.2   0.1   5.5e-05      0.12       9      38 .]     293     323 ..     285     323 .. 0.85
   5 !    6.2   0.1    0.0092        21      10      38 .]     336     368 ..     330     368 .. 0.80
   6 ?   -0.6   0.0       1.3     3e+03       6      19 ..     369     390 ..     369     397 .. 0.75
   7 ?   -0.2   0.0      0.98   2.2e+03      22      37 ..     457     472 ..     452     473 .. 0.78

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 3.1
                 TSEEEEEE CS
        WD40  31 DgtvriWd 38 
                  ++v++Wd
  EPX73638.1 186 RQHVYLWD 193
                 57899998 PP

  == domain 2  score: 17.0 bits;  conditional E-value: 3.6e-06
                 SSS..EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  10 Hss..vtslafspdgawlasGsdDgtvriWd 38 
                 H++  v+sla+s dg++la +  +g+v iWd
  EPX73638.1 205 HTDyvVSSLAYSADGNYLAIARVNGSVEIWD 235
                 745567***************99*******9 PP

  == domain 3  score: 10.3 bits;  conditional E-value: 0.00046
                 SS.SSEEEEEEETTSSEEEEEE CS
        WD40   9 GH.ssvtslafspdgawlasGs 29 
                  H ++++++a+sp ++ l+ G+
  EPX73638.1 248 QHeGDISCMAWSPTSSTLLVGG 269
                 58888************99886 PP

  == domain 4  score: 13.2 bits;  conditional E-value: 5.5e-05
                 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  H   v++l ++ dg+ +asG+ D+ v ++d
  EPX73638.1 293 VHqEQVCGLEWNYDGTQFASGGNDNLVCVFD 323
                 57555**********************9998 PP

  == domain 5  score: 6.2 bits;  conditional E-value: 0.0092
                 S.SSEEEEEEETTSSEEE...EEETTSEEEEEE CS
        WD40  10 H.ssvtslafspdgawla...sGsdDgtvriWd 38 
                 H   v ++af+p ++ ++   +Gs D++++++d
  EPX73638.1 336 HsAAVKAVAFCPWQKSILaigTGSNDQHIYFYD 368
                 744499999999999976456689******998 PP

  == domain 6  score: -0.6 bits;  conditional E-value: 1.3
                 EEESS..SS......EEEEEEE CS
        WD40   6 tltGH..ss......vtslafs 19 
                 t++GH  s       +ts+ +s
  EPX73638.1 369 TFRGHliSKlfcgaqITSIIWS 390
                 6889987556777889999666 PP

  == domain 7  score: -0.2 bits;  conditional E-value: 0.98
                 SSEEEEEETTSEEEEE CS
        WD40  22 gawlasGsdDgtvriW 37 
                 g +++ +  D+tv+++
  EPX73638.1 457 GEFIVVANTDQTVKFY 472
                 567777866*****98 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.0   8.3e-05      0.19     103     158 ..     210     265 ..     169     267 .. 0.75
   2 !   16.0   0.0   3.8e-06    0.0085      56     136 ..     247     328 ..     240     357 .. 0.71
   3 !    8.7   0.2   0.00063       1.4      55     140 ..     291     377 ..     269     391 .. 0.74
   4 ?    0.8   0.0      0.17   3.8e+02      60      80 ..     382     402 ..     360     409 .. 0.75
   5 ?    1.8   0.2     0.088     2e+02     135     187 ..     438     486 ..     428     494 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 8.3e-05
                 --EEEE-TTSSEEEEE-TTSSS-EEEEEETT...TTEEEEEEE-TT--EEEE-TTSSEE CS
       eIF2A 103 rNtiffspkgklvllaGfgnlaGeleiwdvk...kkkkiakaeaanatlvewspdgryv 158
                   ++ +s+ g+++++a    ++G++eiwd++   +++++  +++ + + + wsp+++ +
  EPX73638.1 210 VSSLAYSADGNYLAIAR---VNGSVEIWDRQyltETHEYCFQHEGDISCMAWSPTSSTL 265
                 457899********995...79*********7666667777888899999****98766 PP

  == domain 2  score: 16.0 bits;  conditional E-value: 3.8e-06
                 EESSS.EEEEEE-TTSS-EEEEESSSSCEEEEEECS......CEEEEEEEEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTE CS
       eIF2A  56 lkkegpihdvaWspkskefaviyGkmpakvslfdlk......vkviskleeqkrNtiffspkgklvllaGfgnlaGeleiwdvkkkk 136
                  ++eg+i ++aWsp+s+ ++v  G m  ++++++++      +  i+++++++   + +++ g+ ++ +G  nl   + ++d+++++
  EPX73638.1 247 FQHEGDISCMAWSPTSSTLLV-GGSMG-SIYVYHKTksmmcrLYTIKHVHQEQVCGLEWNYDGTQFASGGNDNL---VCVFDMDTLD 328
                 6899************99765.67776.56677764366655888999999***********************...5566655332 PP

  == domain 3  score: 8.7 bits;  conditional E-value: 0.00063
                 CEESSS.EEEEEE-TTSS-EEEEESSSSCEEEEEECS...CEEEEEEEEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEE CS
       eIF2A  55 elkkegpihdvaWspkskefaviyGkmpakvslfdlk...vkviskleeqkrNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiak 140
                 +  ++ ++  ++W++++++fa   G  ++ v +fd++   + + +  ++++  ++ f+p +k +l  G g+   ++ ++d+ + + i+k
  EPX73638.1 291 KHVHQEQVCGLEWNYDGTQFA--SGGNDNLVCVFDMDtldAPKYFWSHSAAVKAVAFCPWQKSILAIGTGSNDQHIYFYDTFRGHLISK 377
                 23344569999*********8..8************754456666667788899******************9******9987777766 PP

  == domain 4  score: 0.8 bits;  conditional E-value: 0.17
                 S.EEEEEE-TTSS-EEEEESS CS
       eIF2A  60 gpihdvaWspkskefaviyGk 80 
                  +i  + Ws + kef+   G+
  EPX73638.1 382 AQITSIIWSRRYKEFCFSLGY 402
                 46999**********988876 PP

  == domain 5  score: 1.8 bits;  conditional E-value: 0.088
                 TEEEEEEE-TT--EEEE-TTSSEEEEEE-TTT-SSS-EEEEEETTTEEEEEEE CS
       eIF2A 135 kkkiakaeaanatlvewspdgryvlTattaprlrvdngfkiwsysGklvykke 187
                 ++ +a+  + + ++ +w+ +g++++ a t    ++   +kiw  + + v++ +
  EPX73638.1 438 RTIMATHTHRKRSKNDWE-EGEFIVVANTD---QTVKFYKIWGSESQTVHNDQ 486
                 567889999999999997.69999999998...44456899998888888776 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.0   0.00011      0.25     179     227 ..     198     247 ..     181     262 .. 0.80
   2 ?   -2.3   0.0      0.76   1.7e+03     186     216 ..     294     324 ..     272     331 .. 0.64
   3 ?    3.0   0.0     0.018        40     198     222 ..     456     480 ..     435     490 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00011
    Ge1_WD40 179 egllkieehs.liveaafspdGtalatasedGevkffqvyledeeeprCL 227
                 +++l+++++   +++ a+s+dG  la+a  +G v  +      e+++ C+
  EPX73638.1 198 TTILEMRHTDyVVSSLAYSADGNYLAIARVNGSVEIWDRQYLTETHEYCF 247
                 56789999875677889********************8655555555664 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.76
    Ge1_WD40 186 ehsliveaafspdGtalatasedGevkffqv 216
                 ++ ++    +  dGt  a   +d +v  f +
  EPX73638.1 294 HQEQVCGLEWNYDGTQFASGGNDNLVCVFDM 324
                 3345555666677888887777777776655 PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.018
    Ge1_WD40 198 dGtalatasedGevkffqvyledee 222
                 +G  + +a +d +vkf++++ ++++
  EPX73638.1 456 EGEFIVVANTDQTVKFYKIWGSESQ 480
                 578899*************988774 PP

>> PALB2_WD40  Partner and localizer of BRCA2 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   1.2e-05     0.027     297     351 .]     224     278 ..     212     278 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1.2e-05
  PALB2_WD40 297 avltsGaiavWdlllghctalllpesdesWslvrWsgtdsqllaGqkdGsvlvys 351
                      G++ +Wd  + + t     + + + s + Ws t+s+ll G   Gs++vy+
  EPX73638.1 224 IARVNGSVEIWDRQYLTETHEYCFQHEGDISCMAWSPTSSTLLVGGSMGSIYVYH 278
                 44568********99999999999******************************6 PP

>> TFIIIC_delta  Transcription factor IIIC subunit delta N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.1      0.63   1.4e+03      45      80 ..      11      52 ..       2      70 .. 0.65
   2 ?   13.1   0.2   3.1e-05     0.069       6      42 ..     171     207 ..     168     309 .. 0.71

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.63
  TFIIIC_delta 45 aseatkqavklranv......fsededpnwsqaseenysige 80
                  ++  ++  +k+r+n+      +++ +    ++ +++n+si +
    EPX73638.1 11 SPGRLWRITKIRRNTtlnktrVKTRKESKPKTSNQTNFSIRK 52
                  333388888888888777666555555555666677777655 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 3.1e-05
  TFIIIC_delta   6 dalaWSeDgqlavatgesiyiLepklplqklklnrsg 42 
                   ++laWS+ g+lava  +++y+ +  +  + l+ + + 
    EPX73638.1 171 SPLAWSNHGELAVALRQHVYLWDESYGTTILEMRHTD 207
                   79*******************9999888555554443 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.0   0.00063       1.4      81     110 ..     249     280 ..     218     298 .. 0.80
   2 ?    1.8   0.0     0.055   1.2e+02       4      35 ..     299     330 ..     296     354 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00063
   WD40_like  81 ieedistvkv..iddklliGtnkGsiyvfskd 110
                  e dis++    +   ll+G++ Gsiyv+ k 
  EPX73638.1 249 HEGDISCMAWspTSSTLLVGGSMGSIYVYHKT 280
                 5779999865337899*************986 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.055
   WD40_like   4 YsidiskkgslilyGgkddkctvlkleslesv 35 
                   ++ + +g+ ++ Gg+d+ + v+++++l+  
  EPX73638.1 299 CGLEWNYDGTQFASGGNDNLVCVFDMDTLDAP 330
                 5678899********************99865 PP

>> IKI3  IKI3 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.18     4e+02     307     331 ..     170     193 ..     165     197 .. 0.88
   2 ?    8.7   0.1   0.00017      0.38      72     137 ..     204     267 ..     176     314 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.18
                 XXXXXXXXXXXXXXXXXXXXXXXXX CS
        IKI3 307 vqsLaWsadSevLavrledrvqlwt 331
                 +  LaWs+ +e Lav+l++ v+lw 
  EPX73638.1 170 ISPLAWSNHGE-LAVALRQHVYLWD 193
                 5679***9999.8***********5 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00017
                 .XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        IKI3  72 eekkdkivsveyladkeelvlalasGdillvtvdsdaeekeveivGsiesGieaaawspdeellal 137
                 ++++  + s++y ad + l +a  +G + +   d+++ +++ e   + e  i+++awsp   +l++
  EPX73638.1 204 RHTDYVVSSLAYSADGNYLAIARVNGSVEIW--DRQYLTETHEYCFQHEGDISCMAWSPTSSTLLV 267
                 3444456677777777888888888887777..777777777888888888888888887777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (515 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       653  (0.0364214); expected 358.6 (0.02)
Passed bias filter:                      470  (0.0262145); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.64u 0.31s 00:00:00.95 Elapsed: 00:00:00.51
# Mc/sec: 3012.82
//
Query:       EPX73639.1  [L=345]
Description: rab geranylgeranyltransferase alpha subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      2e-42  141.7  15.4    2.8e-08   33.2   0.2    5.5  5  PPTA          Protein prenyltransferase alpha subunit repeat
  ------ inclusion threshold ------
       0.07   13.2   0.0       0.15   12.2   0.0    1.5  1  RC-P840_PscD  Photosystem P840 reaction centre protein PscD
      0.099   12.5   0.1      0.099   12.5   0.1    1.9  2  LRRC37AB_C    LRRC37A/B like protein 1 C-terminal domain


Domain annotation for each model (and alignments):
>> PPTA  Protein prenyltransferase alpha subunit repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.6   0.2   6.6e-11   3.9e-07       2      25 ..      49      72 ..      49      73 .. 0.95
   2 !   31.5   0.7   1.6e-11   9.6e-08       1      28 []      93     120 ..      93     120 .. 0.98
   3 !   33.0   0.0   5.4e-12   3.3e-08       1      28 []     129     156 ..     129     156 .. 0.94
   4 !   33.2   0.2   4.6e-12   2.8e-08       1      27 [.     169     195 ..     169     196 .. 0.97
   5 !   21.7   0.0   1.9e-08   0.00011       1      28 []     218     245 ..     218     245 .. 0.93

  Alignments for each domain:
  == domain 1  score: 29.6 bits;  conditional E-value: 6.6e-11
                HHHHHHHHHH-TT-CHHHHHHHHH CS
        PPTA  2 LeltekliekdpkNYsaWnyRrwl 25
                Lelt++l++ +p  Ys+WnyRr l
  EPX73639.1 49 LELTTELLDWNPETYSVWNYRREL 72
                8*********************87 PP

  == domain 2  score: 31.5 bits;  conditional E-value: 1.6e-11
                 HHHHHHHHHHH-TT-CHHHHHHHHHHCH CS
        PPTA   1 ELeltekliekdpkNYsaWnyRrwllek 28 
                 EL+++ ++++ +pk Y++ n+Rrw+le+
  EPX73639.1  93 ELQYVLSKMKVFPKVYWIFNHRRWCLEN 120
                 9*************************96 PP

  == domain 3  score: 33.0 bits;  conditional E-value: 5.4e-12
                 HHHHHHHHHHH-TT-CHHHHHHHHHHCH CS
        PPTA   1 ELeltekliekdpkNYsaWnyRrwllek 28 
                 E+  tekl++ d++N++ W+yRr+++++
  EPX73639.1 129 EMMITEKLLSADARNFHGWHYRRYVVSQ 156
                 7888*********************986 PP

  == domain 4  score: 33.2 bits;  conditional E-value: 4.6e-12
                 HHHHHHHHHHH-TT-CHHHHHHHHHHC CS
        PPTA   1 ELeltekliekdpkNYsaWnyRrwlle 27 
                 ELe+t+++i ++++N+saW+ R  lle
  EPX73639.1 169 ELEYTSSAIATNFSNFSAWHNRTKLLE 195
                 9***********************997 PP

  == domain 5  score: 21.7 bits;  conditional E-value: 1.9e-08
                 HHHHHHHHHHH-TT-CHHHHHHHHHHCH CS
        PPTA   1 ELeltekliekdpkNYsaWnyRrwllek 28 
                 EL+ + +++++dp++ s+W y+rwl+ +
  EPX73639.1 218 ELDTIHQAAFTDPDDSSIWIYHRWLMGH 245
                 888899*******************976 PP

>> RC-P840_PscD  Photosystem P840 reaction centre protein PscD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   2.4e-05      0.15      74     103 ..      69      98 ..      46     110 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2.4e-05
  RC-P840_PscD  74 eielfvlttqpdiaidlkkkvldnenryvi 103
                   + elf+++  p i+i+ k++vld+e +yv+
    EPX73639.1  69 RRELFLFSVFPYISINEKQDVLDKELQYVL 98 
                   569*************************98 PP

>> LRRC37AB_C  LRRC37A/B like protein 1 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.4      0.97   5.8e+03      68      78 ..      17      27 ..       5      59 .. 0.42
   2 ?   12.5   0.1   1.7e-05     0.099      47      75 ..     287     315 ..     267     328 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 0.97
  LRRC37AB_C 68 kvskaewdtdq 78
                k  +++   ++
  EPX73639.1 17 KLEREKSKIQE 27
                33222222222 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 1.7e-05
  LRRC37AB_C  47 CakLisrtglLmkLlseqqevkvskaewd 75 
                 C  Li   glL+++ls+q+ +k+ +a+w 
  EPX73639.1 287 CCELIVEYGLLIRVLSNQKATKQEQATWI 315
                 99*************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (345 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       840  (0.0468515); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2627.38
//
Query:       EPX73640.1  [L=321]
Description: ribose-phosphate pyrophosphokinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.6e-49  164.9   0.3    7.8e-48  161.2   0.1    2.2  2  Pribosyltran_N  N-terminal domain of ribose phosphate pyropho
    5.7e-44  150.4   5.6    1.5e-37  129.4   2.3    2.6  3  Pribosyl_synth  Phosphoribosyl synthetase-associated domain
    1.8e-14   53.6   1.0    4.4e-14   52.3   1.0    1.6  1  Pribosyltran    Phosphoribosyl transferase domain
  ------ inclusion threshold ------
      0.034   13.6   0.1      0.063   12.7   0.1    1.4  1  UPRTase         Uracil phosphoribosyltransferase
       0.12   12.1   0.2       0.53   10.0   0.1    2.1  3  TgMIC1          Toxoplasma gondii micronemal protein 1 TgMIC1


Domain annotation for each model (and alignments):
>> Pribosyltran_N  N-terminal domain of ribose phosphate pyrophosphokinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  161.2   0.1   2.2e-51   7.8e-48       1     116 []       6     122 ..       6     122 .. 0.99
   2 ?    1.7   0.0     0.064   2.3e+02      16      87 ..     184     252 ..     177     287 .. 0.70

  Alignments for each domain:
  == domain 1  score: 161.2 bits;  conditional E-value: 2.2e-51
  Pribosyltran_N   1 lkifagssskeLaekiakrlgvelgkakvsrfadgEikveieesvrgkdvfiiqslskpvndnlmelllmidalrrasakritaViPylgysrqd 95 
                     +kifag+s++eLaek+akr+g++lgka v ++++ E++v+i esvr++dvfi+q+ + ++nd+lmell+mi+a+r asa+rita+iP+++y+rqd
      EPX73640.1   6 IKIFAGNSHPELAEKVAKRIGLSLGKAAVVQYSNRETSVTIGESVRDEDVFILQTGCGSINDHLMELLIMINACRSASARRITAIIPCFPYARQD 100
                     69********************************************************************************************* PP

  Pribosyltran_N  96 rk.ksrepisaklvaklLeaaG 116
                     +k ksr+pi+a+lva++L++aG
      EPX73640.1 101 KKdKSRAPITARLVANMLQTAG 122
                     **999***************99 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.064
  Pribosyltran_N  16 iakrlgvelgkakvsrfadgEik.veieesvrgkdvfiiqslskpvndnlmelllmidalrrasakritaViP 87 
                     +a+rl++  + ++ +r + +E++ + +  +vr+k  +++ +++    d+   l l +++l+   ak + a++ 
      EPX73640.1 184 LADRLDLDFALIHKERQKANEVSrMVLVGDVRDKLAILVDDMA----DTCGTLGLAAKTLKDNGAKAVYAIVT 252
                     5666666666555555555555414555578888777777665....44566777778888888888877765 PP

>> Pribosyl_synth  Phosphoribosyl synthetase-associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       1.7   6.2e+03     103     162 ..     115     131 ..     100     135 .. 0.63
   2 !   22.1   0.0   3.6e-08   0.00013       3      40 ..     166     203 ..     164     207 .. 0.90
   3 !  129.4   2.3   4.2e-41   1.5e-37      73     183 ..     206     316 ..     201     317 .. 0.97

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 1.7
                     HHHHHHTT--EEEEEEEEE---TTHHHHHHHSS--EEEEESSS--HHHHHT-TTEEEE-- CS
  Pribosyl_synth 103 aevlkerGaykiyvlathGllssdaprlleesaidevvvtntipheiqklrcskiktvdi 162
                     a++                                           +q + c+ i t+d+
      EPX73640.1 115 ANM-------------------------------------------LQTAGCNHIITMDL 131
                     334...........................................45555555555554 PP

  == domain 2  score: 22.1 bits;  conditional E-value: 3.6e-08
                     GGEEEEESSGGGHHHHHHHHHHTT-EEEEE-------- CS
  Pribosyl_synth   3 rnavivakspgsakkatsyaerlrlglavihGeqkeae 40 
                     + aviv+ + g ak+at+ a+rl l  a+ih e+++a+
      EPX73640.1 166 NPAVIVSPDAGGAKRATALADRLDLDFALIHKERQKAN 203
                     569******************************98875 PP

  == domain 3  score: 129.4 bits;  conditional E-value: 4.2e-41
                     ----EES--TTSEEEEEEEEE-S-HHHHHHHHHHHHTT--EEEEEEEEE---TTHHHHHHHSS--EEEEESSS--HHHHHT-TTEEEE--HHHHH CS
  Pribosyl_synth  73 ppltvvGdvgGriaiivddliddvesfvaaaevlkerGaykiyvlathGllssdaprlleesaidevvvtntipheiqklrcskiktvdisllla 167
                       + +vGdv  ++ai+vdd+ d   ++  aa++lk++Ga  +y+++thG+ls +a r++++sa+++v+ tntiph+ ++  c+ki+t+dis +la
      EPX73640.1 206 SRMVLVGDVRDKLAILVDDMADTCGTLGLAAKTLKDNGAKAVYAIVTHGILSGKAIRVINDSALEKVICTNTIPHDDKRRICNKIETIDISGVLA 300
                     56899****************************************************************************************** PP

                     HHHHHHHHT---TT-S CS
  Pribosyl_synth 168 eairrihngesmsylf 183
                     e+irrih+ges+s lf
      EPX73640.1 301 ECIRRIHHGESVSVLF 316
                     ***************9 PP

>> Pribosyltran  Phosphoribosyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.3   1.0   1.2e-17   4.4e-14      15     138 ..     153     271 ..     143     284 .. 0.84

  Alignments for each domain:
  == domain 1  score: 52.3 bits;  conditional E-value: 1.2e-17
                   EEETTEEEEEE--GGGEEEEEEETTTHHHHHHHHHHSTT-EE-EEEEEE-TTT--EE........EE----TTSEEEEE-SEESSSHHHHHHHHHHH CS
  Pribosyltran  15 varlaaeileeyngkpdvvvgiargGvpfakiladeLevplayvrkvkyrpdgseeaargssdesrlledpagkkVliVDDildtGgTllaalelLk 111
                   v r+++e +++ n +p v+v ++ gG  +a++lad+L++ +a + k++  ++  + ++        l +d+++k  ++VDD+ dt gTl  a++ Lk
    EPX73640.1 153 VLRYIRENIDT-NVNPAVIVSPDAGGAKRATALADRLDLDFALIHKERQKANEVSRMV--------LVGDVRDKLAILVDDMADTCGTLGLAAKTLK 240
                   55778888888.999***********************99999999999999999998........9****************************** PP

                   CC-BSEEEEEEEE....E-HHHHHHHHHH-T CS
  Pribosyltran 112 ekgpeevriavlv....dkpateeevdknak 138
                   + g++ v ++v +     k  +++++++  k
    EPX73640.1 241 DNGAKAVYAIVTHgilsGKAIRVINDSALEK 271
                   *****99999988776566666666655444 PP

>> UPRTase  Uracil phosphoribosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   1.8e-05     0.063      97     172 ..     193     267 ..     178     286 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1.8e-05
     UPRTase  97 lglqreeetlepveyynkLPkkiaertvlllDpviaTGgsaaaaiqlLkergvgeekIlvlsvlaseegvkrlaee 172
                 +++++e ++++ v  +  L  +++++ ++l+D +  T g++  a ++Lk++g++    +v   + s ++++ + ++
  EPX73640.1 193 ALIHKERQKANEVSRM-VLVGDVRDKLAILVDDMADTCGTLGLAAKTLKDNGAKAVYAIVTHGILSGKAIRVINDS 267
                 5666777666644444.5888999****************************999888888888888888766655 PP

>> TgMIC1  Toxoplasma gondii micronemal protein 1 TgMIC1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       1.2   4.3e+03      19      33 ..      33      47 ..      22      70 .. 0.54
   2 ?   -2.6   0.0       1.1   4.1e+03      93     115 ..     110     132 ..     103     135 .. 0.75
   3 ?   10.0   0.1   0.00015      0.53      80     123 ..     217     261 ..     201     269 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 1.2
      TgMIC1 19 ltltyistkldvavG 33
                 ++ y+  +  v++G
  EPX73640.1 33 AVVQYSNRETSVTIG 47
                333333333333333 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.1
      TgMIC1  93 alrsvayvvedsGcksieevllq 115
                 + r va +++ +Gc+ i  + l+
  EPX73640.1 110 TARLVANMLQTAGCNHIITMDLH 132
                 56788999999999988776665 PP

  == domain 3  score: 10.0 bits;  conditional E-value: 0.00015
      TgMIC1  80 rlavvl.dyarlnaalrsvayvvedsGcksieevllqGlnsGakl 123
                 +la+++ d a   ++l+ +a +++d G k++ +++ +G+ sG  +
  EPX73640.1 217 KLAILVdDMADTCGTLGLAAKTLKDNGAKAVYAIVTHGILSGKAI 261
                 555544167888999************************999654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       540  (0.0301188); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2297.64
//
Query:       EPX73641.1  [L=353]
Description: hypothetical protein SOCG_02859 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.9e-20   72.4   0.7    3.2e-20   71.6   0.7    1.4  1  zinc_ribbon_10  Predicted integral membrane zinc-ribbon metal
  ------ inclusion threshold ------
      0.013   15.4   0.3      0.022   14.7   0.3    1.3  1  DUF485          Protein of unknown function, DUF485
      0.045   12.5   0.3      0.057   12.2   0.3    1.1  1  DUF2207         Predicted membrane protein (DUF2207)
      0.088   13.1   1.0       0.17   12.2   1.0    1.4  1  2TM             2TM domain
       0.33   11.0   5.1       0.44   10.5   2.4    2.2  2  UCMA            Unique cartilage matrix associated protein


Domain annotation for each model (and alignments):
>> zinc_ribbon_10  Predicted integral membrane zinc-ribbon metal-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.6   0.7   8.8e-24   3.2e-20       1      54 []     179     233 ..     179     233 .. 0.98

  Alignments for each domain:
  == domain 1  score: 71.6 bits;  conditional E-value: 8.8e-24
  zinc_ribbon_10   1 wfDrvldvLvGddetsaknryalICskChshnGlap.keeleevkyrCpkCgaln 54 
                     w+D+vl+ LvG de  +knr alIC++C  hnGla+  e+++ v+y+C++C+++n
      EPX73641.1 179 WYDKVLEGLVGADEREEKNREALICQHCYRHNGLASvGERAKFVRYVCMYCKSWN 233
                     9***********************************9999999***********8 PP

>> DUF485  Protein of unknown function, DUF485
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.3   6.1e-06     0.022       6      75 ..      28      95 ..      24     113 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 6.1e-06
      DUF485  6 FqeLvrkrrrfafpltaiflvvYfgfvllvafapdll.atkvgegnitvglllgllqivltflltglYvrr 75
                 + L++k++ + f  +++ +++Y   v+l a+  +l+ + +++  +i+v ++l ll  +    ++++Y rr
  EPX73641.1 28 IETLKEKKEHIRFRYSIFSFLIYTITVALYAYRSSLFvGHPIL--SISVWIVLYLLG-AGLHGIAWFYERR 95
                6789*****************************9976367777..588888776653.4556677777766 PP

>> DUF2207  Predicted membrane protein (DUF2207)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.3   1.6e-05     0.057     350     469 ..      14     138 ..       1     139 [. 0.66

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.6e-05
     DUF2207 350 akkfkkalkkwksavkkkergyfdkkgkkklkklsalglgliilglilillallllvll..lvfllilllillliaiivlllfsr........llgrrt 438
                  +++ ++l++++ +++      +++k++ +++++s++++++  + ++l  +   l+v++  l++ ++++l ll +++  +++f+         + +++ 
  EPX73641.1  14 LDRLEEQLDEVQYKIET-----LKEKKEHIRFRYSIFSFLIYTITVALYAYRSSLFVGHpiLSISVWIVLYLLGAGLHGIAWFYErrlrstklRRRKFQ 107
                 44445555555555555.....77777888888888888888888888888877777767733334444444444333333333345666655555559 PP

     DUF2207 439 eeGaellakwkgFkkyLeDfsefkerppedl 469
                 ee +++l+ +k+ k+y e ++ +++++++++
  EPX73641.1 108 EEKRQILDALKSRKEYFETQALLEKYGEQSP 138
                 ******************9999999999887 PP

>> 2TM  2TM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   1.0   4.7e-05      0.17       7      74 ..      34     109 ..      29     111 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 4.7e-05
         2TM   7 vkeikgFyrhlvvYlivniflilinl.........gsswflwpilfWgiglllhalkvFgtekffgkeWeerkiekl 74 
                  ke  +F+  ++++li  i + l+ +           s ++w i++  +g  lh++  F  +++ + +  +rk +++
  EPX73641.1  34 KKEHIRFRYSIFSFLIYTITVALYAYrsslfvghpILSISVW-IVLYLLGAGLHGIAWFYERRLRSTKLRRRKFQEE 109
                 577789999*******99988888665555664443333355.4556889999****9998888888******9985 PP

>> UCMA  Unique cartilage matrix associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   2.4   0.00012      0.44      56     101 ..      90     134 ..      84     161 .. 0.79
   2 ?    0.3   0.0      0.18   6.3e+02     105     127 ..     190     212 ..     174     216 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00012
        UCMA  56 nflkrrgkrspksqdeinaenrqrlaaderrreyyeeqrnefenyv 101
                  f+ rr + +   + + + e+rq l a + r+ey+e q    e y 
  EPX73641.1  90 WFYERRLRSTKLRRRKFQEEKRQILDALKSRKEYFETQA-LLEKYG 134
                 577777766666788999******************995.344444 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.18
        UCMA 105 ndeqeersrekveqwrqfhydGl 127
                  de+ee+ re++     + ++Gl
  EPX73641.1 190 ADEREEKNREALICQHCYRHNGL 212
                 69********9877777777777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (353 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1134  (0.0632495); expected 358.6 (0.02)
Passed bias filter:                      753  (0.041999); expected 358.6 (0.02)
Passed Vit filter:                        72  (0.00401584); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 2585.79
//
Query:       EPX73642.1  [L=436]
Description: succinate-CoA ligase beta subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.3e-74  248.5   0.0    7.2e-74  247.7   0.0    1.4  1  ATP-grasp_2  ATP-grasp domain
      3e-23   82.3   0.2    4.7e-23   81.7   0.2    1.3  1  Ligase_CoA   CoA-ligase
    2.6e-05   23.8   0.0    7.6e-05   22.3   0.0    1.8  1  ATP-grasp_5  ATP-grasp domain
  ------ inclusion threshold ------
      0.074   12.8   0.0       0.22   11.3   0.0    1.8  2  GARS_A       Phosphoribosylglycinamide synthetase, ATP-grasp 


Domain annotation for each model (and alignments):
>> ATP-grasp_2  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  247.7   0.0   1.6e-77   7.2e-74       2     201 ..      28     234 ..      27     235 .. 0.99

  Alignments for each domain:
  == domain 1  score: 247.7 bits;  conditional E-value: 1.6e-77
                  E-HHHHHHHHHCTT----SEEEESSHHHHHHHHHHHTSSSEEEEE--SSSTCCCT.......TCEEEESSHHHHHHHHHCCTTSEEE-TTS-TT-EEE CS
  ATP-grasp_2   2 lhEyqakeilakygvkvpegevaesaeeaeeaakklgekelvvKaQvlaGGRGKa.......gGvklvkskeeakeaakellgkelvtkqtgkeGkkv 92 
                  lhEy +++il+k++v+vp+g va+s +eae++a++lg ++lvvKaQvlaGGRGK+       gGv+ v++++ea+++ ++++g++l+tkqtg++Gk++
   EPX73642.1  28 LHEYLSHDILRKFNVDVPRGGVAKSGQEAEKVAQNLGVSDLVVKAQVLAGGRGKGqfesglrGGVRSVYDPTEARMFSEQMIGHKLITKQTGPAGKPC 125
                  9************************************************************************************************* PP

                  --EEEEE---ECEEEEEEEEEETTTTEEEEEEESSTTS-HHHHHHH-GGGEEEEEEBTTTB--HHHHHHHHHHCT--CHHHHHHHHHHHHHHHHHHHT CS
  ATP-grasp_2  93 ekvlveealdikkElYlsivlDraskkvvviaSseGGvdiEevaakkPekiikvaidpakglkeeqareiakklglekelvkkaakiikklyklfvel 190
                  + v+v+e+  +++E+Y++i++ r++++++++aS++GGvdiE vaa++P++iik ++ ++  l+++ a+e+++klg++  + ++a ++i+klyk+f+++
   EPX73642.1 126 NSVYVCERKYVRREYYFAILMNRDEQCPMIVASDQGGVDIEGVAAENPSAIIKRSLPNTPTLDRSIAEEVVTKLGFTPACKEQAIDAISKLYKVFNDC 223
                  ************************************************************************************************** PP

                  TEEEEEEEEEE CS
  ATP-grasp_2 191 datlvEiNPLv 201
                  dat+vEiNPL+
   EPX73642.1 224 DATQVEINPLA 234
                  **********8 PP

>> Ligase_CoA  CoA-ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.7   0.2   1.1e-26   4.7e-23       1     152 [.     294     413 ..     294     414 .. 0.98

  Alignments for each domain:
  == domain 1  score: 81.7 bits;  conditional E-value: 1.1e-26
                 EESSHHHHHHHHHHHHHT..............T--BSEEEE-TSS--..........HHHHHHHHHHHHS-TT-SEEEEEEEESSSEHHHHHHHHHHHH CS
  Ligase_CoA   1 lvnGGtLayeamdlikealgdvasnkklknvlgseqheiidlGddaftkGrpHPmiDptkriealkklaadpevkvilldivlGygahedpaaellkai 99 
                 lvnG++La+++md+ik++              g+e+++++d+G+ a            +++ ea+  +++d+++ +i+++i++G+++++ +a++l++ +
  EPX73642.1 294 LVNGAGLAMATMDIIKLH--------------GGEPANFLDVGGNAN----------AEAIREAFSLITKDNKTTAIFVNIFGGIVRCDVIAQGLISVV 368
                 79****************..............***************..........7***************************************** PP

                 HHTT...--S-EEEEEECTTHH.....HHHHHHHTTTSSEEE-SSHHHHHHHH CS
  Ligase_CoA 100 keakaegrelpvvarvaGteadpqelseqakaleeagveiasskaqalraaka 152
                 ++++    ++p++ r++Gt+++     +++++++++g++i s ++ +++a+ka
  EPX73642.1 369 SRLN---LNIPIICRLQGTNQH-----AAKDVINNSGLRIFSFDDLDEAAQKA 413
                 ***8...***************.....********************999886 PP

>> ATP-grasp_5  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   1.7e-08   7.6e-05       5     220 ..      23     248 ..      20     250 .. 0.82

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 1.7e-08
  ATP-grasp_5   5 egrtlLteaeakelleaygipvvetrlassaeeaveaaeeigyp.vvlKivs......pdilhKtdvgGvrlnlkdaeevraaaeeiler..vkeks. 92 
                  +++  L e+ ++++l+ ++++v++  +a+s +ea ++a+++g    v+K ++      ++       gGvr  + d+ e r   e+++ +  +++ + 
   EPX73642.1  23 KRNLALHEYLSHDILRKFNVDVPRGGVAKSGQEAEKVAQNLGVSdLVVKAQVlaggrgKGQFESGLRGGVRS-VYDPTEARMFSEQMIGHklITK-Qt 118
                  5667899***********************************998****99975544444555566789998.99*******9999986522223.23 PP

  ATP-grasp_5  93 ..peariegvlVqemakr.ggrElivgvteDpvFGpvilfGlGGtavevlkdvavalpplnstlareliertkaskllkgvrgekkadlaaleellvr 187
                    +++  + v V e + + +++ + + +++D++   +++  +GG+ +e ++          s      ++r  a +++++   + +a  ++  + +++
   EPX73642.1 119 gpAGKPCNSVYVCERKYVrREYYFAILMNRDEQCPMIVASDQGGVDIEGVAAENPSAIIKRSLPNTPTLDRSIAEEVVTKLGFT-PACKEQAIDAISK 215
                  44578899***999966569*************99999999*******999998777777777777788888888999998888.6666666789999 PP

  ATP-grasp_5 188 lsqLvvdlpeIreldinPllveeeg.vvalDari 220
                  l +   d +  ++++inPl  + ++ v+++Da++
   EPX73642.1 216 LYKVFND-CDATQVEINPLAETTDQkVLCMDAKL 248
                  99*****.56799******9988555*****986 PP

>> GARS_A  Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   4.9e-05      0.22       6      53 ..      33      80 ..      29     109 .. 0.94
   2 ?   -2.7   0.0      0.92   4.1e+03      22      61 ..      94     135 ..      88     151 .. 0.69

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 4.9e-05
                HHHHHHHTT--B--EEEESSHHHHHHHHHHHSSSEEEEEESC-GGGT- CS
      GARS_A  6 akdllkkagiptaeyeaftdpeeakeyieeatakalVvKadglaagKg 53
                ++d+l+k ++  ++  + ++ +ea+++ ++++   lVvKa+ la+g+g
  EPX73642.1 33 SHDILRKFNVDVPRGGVAKSGQEAEKVAQNLGVSDLVVKAQVLAGGRG 80
                578999***************************************998 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.92
                 EESSHHHHHHHHHHHSSSEEEEEESC-GGG..T-EEEESSHH CS
      GARS_A  22 aftdpeeakeyieeatakalVvKadglaag..Kgvivaksee 61 
                 ++ dp ea+ + e++  + l+ K+ g a+     v+v++ + 
  EPX73642.1  94 SVYDPTEARMFSEQMIGHKLITKQTGPAGKpcNSVYVCERKY 135
                 567888888888888888888888886653224677776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (436 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       364  (0.0203023); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 3174.55
//
Query:       EPX73643.1  [L=535]
Description: transcription factor TFIIF complex alpha subunit Tfg1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.3e-19   67.8  18.9      5e-11   41.9   1.1    2.7  3  TFIIF_alpha  Transcription initiation factor IIF, alpha subun


Domain annotation for each model (and alignments):
>> TFIIF_alpha  Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.6   3.4      0.33     6e+03     411     461 ..      50     108 ..       2     114 .. 0.47
   2 !   41.9   1.1   2.8e-15     5e-11      93     189 ..     146     232 ..     118     240 .. 0.76
   3 !   39.2  10.6   1.9e-14   3.4e-10     277     499 ..     264     511 ..     259     533 .. 0.76

  Alignments for each domain:
  == domain 1  score: -4.6 bits;  conditional E-value: 0.33
                  XXXXXXXX..........XXXXXX...XXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXX CS
  TFIIF_alpha 411 skskrkaa........seeskspvsvpaKklktenapkssskkslpqtvsksksssnka 461
                   k+ rk+         s+++  p+ +    +k++   +  s  s ++ +s    ss++ 
   EPX73643.1  50 PKNERKTVnhhllkfhSNKTIDPMKTFVPPIKMQRRDPHASSSSNNEQQSAEPGSSSNM 108
                  35555554556664444444445555555566665544444555555555555555544 PP

  == domain 2  score: 41.9 bits;  conditional E-value: 2.8e-15
                  XCTTSXEEEEESSTTS..EEEEEEEXSSSSSSEEEEEEEEETTSEEEEEEEEEEEEEEEGGCSTXXSSTTTHHHHHHHXSSSXSHHHHHHXXXXXX. CS
  TFIIF_alpha  93 rlddqPWiLevggkeggqkkfrGireGgvsenasyyvltkapdgafeAypvneWynFnpvaryktLtleeAEeeferRkktlngfslmlkkalkkge 189
                    +  PWi+e  + eg ++ +    eGg+s  ++y +++  +++ f+ +p++ +y+Fn+  +++tL+++eAE +++++  +     ++++k+ +++e
   EPX73643.1 146 EEELSPWIME--DFEG-KNTWVSTMEGGQS--SAYVLFMF-SENGFKVIPADRFYRFNQRSNFQTLSIDEAEAKMNKKTPI----PRWFMKKDNNQE 232
                  34568*****..4455.7789999******..66666665.8999******************************987654....577777777775 PP

  == domain 3  score: 39.2 bits;  conditional E-value: 1.9e-14
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXX CS
  TFIIF_alpha 277 ddegrEldyisDdsasendpeeredkkseEeeekkeieqdedeeekeee.kkeeegklskkkkkakklkkkkkekdkkdSddeedsddsDideedsvs 373
                  d+ + ++ + +D++a   + +e+ +k+ eE+ +k+    +   e++e + ++e+e + s ++kk+++ +k  +++   +Sd+e+++     +e++s  
   EPX73643.1 264 DELDFDEEFADDEEAPIVEGNEEDNKQLEEKMKKEMLTANLFGEAEEPNyEEEQERQMSHEGKKLQRYLKLLEKNLAYESDEEDENPYASPNEASSEE 361
                  44456788999999999888888887777777777766654333333221345667789999999998888888888999888777777777777777 PP

                  XXXXXXXXXXXXXXXX.XXXXXXXXXXX.XXXXXXXXXXXXXXXXX.................................XXXXXX...XXXXXXXXXX CS
  TFIIF_alpha 374 lvkakKkkekkkeekvdsnessagnsrp.arpspeqkdskskrkaa...............................seeskspvsvpaKklktenap 439
                   v ++ +  +k+eekv s  s +  + p ++++p+++  + +r ++                               ++ s+ ++  p  + k+ ++p
   EPX73643.1 362 EVLKEEEELQKREEKVKSRFSASKTTTPkPTGTPSTNL-SPQRPVSqlsspsqsflqprpsepivkgpgylalrissEKLSRFASDFPPLRPKIITTP 458
                  78888888889*****9998766555551566766555.7777777899*************************9977778889999*********** PP

                  XXXXXXXXXXXXXX.XXXXXXX-SS--HHHHHHHHHHS-B-HHHHHHHTSHHHHSS-HHH CS
  TFIIF_alpha 440 kssskkslpqtvsksksssnkadggvtEeavrryLmrkplTtkeLlkkfkakktglssee 499
                   s   ++ +++  + +++   ++  +t+ +v + L   p+T+k+L++ f++k    + + 
   EPX73643.1 459 SS---EAIAGAEGG-ANAGTDDSNLITDAEVIQALKNGPITIKDLIHLFHTK---FKADT 511
                  44...588888777.9999999*****************************9...44433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (535 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1718  (0.0958224); expected 358.6 (0.02)
Passed bias filter:                      541  (0.0301746); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.28s 00:00:00.90 Elapsed: 00:00:00.41
# Mc/sec: 3875.23
//
Query:       EPX73644.1  [L=303]
Description: complexed with Cdc5 protein Cwf26 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.1e-47  159.3   9.7    8.1e-47  159.3   9.7    2.9  3  Bud13     Pre-mRNA-splicing factor of RES complex
  ------ inclusion threshold ------
        0.4   10.7  18.4      0.042   13.9  13.3    1.8  2  Nop16     Ribosome biogenesis protein Nop16
       0.64   10.6   3.9       0.91   10.1   3.9    1.2  1  SOBP      Sine oculis-binding protein


Domain annotation for each model (and alignments):
>> Bud13  Pre-mRNA-splicing factor of RES complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   2.5      0.31   1.9e+03      23      84 ..      19      81 ..       5     113 .. 0.50
   2 ?   -0.2   3.1       0.2   1.2e+03      25      67 ..      99     142 ..      60     150 .. 0.63
   3 !  159.3   9.7   1.4e-50   8.1e-47       1     145 []     151     286 ..     151     286 .. 0.94

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.31
       Bud13 23 ekkkkeeeekeekkkewgkGlvqkeekekrleelekekkkp.laryaddedlneelkekerwd 84
                ++kk++ ++  e ++e   G    +e     e +   +++p + ++++ edl+e+  +++ +d
  EPX73644.1 19 KRKKSKSSDFLEIQDEDVAGWRNDDEFAGYSEGATISQDQPtIVNHEHIEDLDENTIAQKAQD 81
                333333333334444444444444444444444444444444666666666666665554433 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.2
       Bud13  25 kkkeeeekeekkkewgkGlvqkee.kekrleelekekkkplary 67 
                 k k e +k++ ++  g Glv+ ++  e+ +++ e+e ++++a +
  EPX73644.1  99 KPKLEPSKQSTNQGPGYGLVTGKQvSEEARRKRESEVQEKFAMS 142
                 33444456666666777777655414555666666677777644 PP

  == domain 3  score: 159.3 bits;  conditional E-value: 1.4e-50
       Bud13   1 etvyRdktgrkidleekreaeaekkkkeeeekeekkkewgkGlvqkeekekrleelekekkkplaryaddedlneelkekerwdDPmaaflkkkkkkkk 99 
                 etvyRd+tg++id+  +r +ea+kk +e+e +++++ke ++G+vq +++++ ++ele++k+ pl+ry+dd ++n+elkek rw+DP+ +fl+k++    
  EPX73644.1 151 ETVYRDATGKRIDITLAR-QEARKKLAEQELEKKQQKENQQGEVQLRQQQEYIAELERQKNVPLSRYEDDPEYNQELKEKVRWNDPATSFLTKRS---- 244
                 7***************99.999999999999999**********************************************************443.... PP

       Bud13 100 kkskkkkpkykgpaappNRfgIkPGyrWDGvdRsnGfEkklfealn 145
                 +   ++ ++y+g  appNRf+I+PG+rWDG+ R+nGfE+++f+++n
  EPX73644.1 245 T---TSTKAYQG-YAPPNRFNIRPGHRWDGIIRGNGFENRWFQRQN 286
                 2...23689*99.******************************997 PP

>> Nop16  Ribosome biogenesis protein Nop16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.2      0.31   1.8e+03      79      79 ..      35      35 ..       8     113 .. 0.51
   2 ?   13.9  13.3     7e-06     0.042      68     156 ..     124     212 ..     114     232 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.31
       Nop16 79 k 79
                +
  EPX73644.1 35 D 35
                1 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 7e-06
       Nop16  68 skanekeekekkkleeeesdekklskgearieRDeeGkivkviegk.kkkeneledpleeleedeekeeeeekkkktevvkeLekeaare 156
                 s++ ++++ e++ +e+   ++++l+k++  + RD++Gk +++   + +++++  e++le+ +++e+++ e + ++++e + eLe++ + +
  EPX73644.1 124 SEEARRKR-ESEVQEKFAMSDEELRKSKETVYRDATGKRIDITLARqEARKKLAEQELEKKQQKENQQGEVQLRQQQEYIAELERQKNVP 212
                 33222222.22333335677889*********************98566666666699999999888888889999*********99876 PP

>> SOBP  Sine oculis-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   3.9   0.00015      0.91      48     172 ..     102     225 ..      92     287 .. 0.54

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00015
        SOBP  48 LdmnphlkeksksaGseaqLitPdlwlsncrsrsaspaskrsesvspeps.ksaspsssptssnsskplisvassskllaeksqepaslveapl.epkk 144
                 L    +  ++s+++G    L+t     +++r++ +s ++++   +++e+  ++++    +t +     l + + + k+lae++ e+++++e+++ e++ 
  EPX73644.1 102 L----EPSKQSTNQGPGYGLVTGKQVSEEARRKRESEVQEKFAMSDEELRkSKETVYRDATGKRIDITLARQEAR-KKLAEQELEKKQQKENQQgEVQL 195
                 3....23345555666679******************99999998888763333444444444444444444444.55554444444444444303322 PP

        SOBP 145 qrkk..kpglrkpkqvkagsskssetkagl 172
                 ++++   ++l+++k+v+ +  +     +++
  EPX73644.1 196 RQQQeyIAELERQKNVPLSRYEDDPEYNQE 225
                 222222333333333333322222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (303 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2281  (0.127224); expected 358.6 (0.02)
Passed bias filter:                      528  (0.0294495); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.37
# Mc/sec: 2455.99
//
Query:       EPX73645.1  [L=851]
Description: nucleoporin Nic96 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   1.6e-177  591.7   0.1     2e-177  591.5   0.1    1.1  1  Nic96          Nup93/Nic96
  ------ inclusion threshold ------
      0.055   12.9   0.1       0.19   11.2   0.1    1.9  1  Peptidase_C65  Peptidase C65 Otubain


Domain annotation for each model (and alignments):
>> Nic96  Nup93/Nic96
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  591.5   0.1  2.2e-181    2e-177       2     621 .]     217     836 ..     216     836 .. 0.94

  Alignments for each domain:
  == domain 1  score: 591.5 bits;  conditional E-value: 2.2e-181
                 SHHHHHHHHHHHHHH...T............TTTS--.-.................HHHHHHHHHHHHHHHHHHHHHCC....CTTSSSS-HHHHHHHH CS
       Nic96   2 dskdkqlleaWkllkelvgekpe........vkerefak.......srqsaelrkrivegarryLEkqfleyveeliaknpreaqlggvpsvvnkvraF 85 
                 d+k+  l+e+W+ll++ ++ ++         +      +       s ++++l++ri++ +rr+LEkqf++ v++ i++np++a+ ggvpsv+nk+ra+
  EPX73645.1 217 DTKSLLLYETWNLLRSFTSYDSFsdpllgpkS------QlfpfyedSPSKVRLNQRIIDCSRRFLEKQFFDVVNKEIENNPQAASIGGVPSVLNKIRAY 309
                 6788899************9976777766331......133445568889************************************************* PP

                 HHCTTBESSSCBSSTT--EETTEEHHHHHHHHHTTT-HHHHHHHHHHTGGGS-TTT.THHHHHHHHCTTTTSS---TCCCHHHHHHHHHHTTT.-TTS- CS
       Nic96  86 vrvrlakknlaedaglldevngeplWaliyylLRaGdldeAlevvnenkeafrkld.rsfaaylkayassedrrlpseleerlkleYnqrirnasedsD 183
                 +++r+ +kn  + +++ + + + p+Wa i+ylLRaG+ldeA++++++n++ f++ + ++f++ylkay ++++  +p+el+++l +e+nq +r+ +ed D
  EPX73645.1 310 INIRF-SKNGVWANSNIEFLGDLPVWAFIFYLLRAGYLDEAVTYTQQNHSFFEDRQaSDFPTYLKAYSKAPNSIIPKELRNKLFSEFNQTLRF-QEDYD 406
                 *****.5577**************************************99998754178*********************************9.8988* PP

                 HHHHHHHHHHHT--CCC-S-T.TC--SHHHHHHHHHHH---TTSSSSS.SS----HHHHHHHHHHH-GGGCTT-......HHHHHHHTT-HHHHHHHHH CS
       Nic96 184 pykkavYkiigrcdlsrknlhqevaktieDwlWlqLslireddrdsselasekytledLqklilkyGeshFnas.eqpllYfqvllLtgqFEaAieyly 281
                 p+k+avYkiigrc+ls+++++ +v+  +eD++WlqLsl+re ++ ++ +a+e ++l+d+qkl+++yG+++F+++ + p++Yf++l+L+g++E+Aie+ly
  EPX73645.1 407 PFKYAVYKIIGRCELSKTSCP-SVCFVTEDYIWLQLSLAREFTE-TNVSAHECFSLQDVQKLVISYGPDYFTKQgSYPVMYFFLLMLCGLYERAIEFLY 503
                 *********************.*********************9.78999*********************9887999********************* PP

                 TT-HHHHHHHHHHHHHTT------.......------..-------HHHHHHHHHHTTTTT-HHHHHHHHHGGGGS-S...CCHHHHHHHHHHHHHHHH CS
       Nic96 282 resrvdAVHlAIaLaeygLLrvsdskvs...eellsveteskrrinfarligqYtrkfeatdprealeYlylirllkdlegkeqrelchealrelvlet 377
                 ++ ++dAVH+AIa a+ygLL++++ k+s   + ll+++te +++i +  +++ Y++ +++ d+   + Yl+ ++ ++++     + +cheal++l+l+t
  EPX73645.1 504 SYYPADAVHFAIACAHYGLLHTASLKSSpplDALLINDTEGQPSIRYEAMLMGYVKGMQEFDAITSACYLASMCEVAEY-----APVCHEALKDLILNT 597
                 **********************9998889999********************************************985.....56************* PP

                 --HHHHHEEE-TTS-EEE-HHHHTGGGGT-SSSSHHHHHHHHHHHHHHHHCT-HHHHHHHHHHTT-HHHHHHHHHHHHHHHHHCSSSSSSSST....TT CS
       Nic96 378 refalLLGdirsdGtripGlieerlkliklddeeeflkkiieqaAreaeekgrledAilLydlageydkvlellnrlLsqvlstqplkprsererlqqe 476
                 r++ +L+Gdir+dG+ripG++e+r +l+kl+++eefl ki++q A+ a+++g+++d+ilLy+la++yd v++++nr+L+++l    ++++         
  EPX73645.1 598 RDYVNLVGDIRADGERIPGFLESRYSLLKLSSQEEFLTKITLQSAKIADDQGLWSDSILLYHLAEAYDVVISVVNRCLGSALL-GFMDQGIF-----P- 689
                 **********************************************************************************9.32222222.....3. PP

                 TSHHHHHHHHHHHHTTSHHHHTTS-HHHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHTT-S--.-HHH...HHHHHHCGCCS-HHHHTTHHHHHHHH CS
       Nic96 477 edpveLaekileryesnakisekvsaknretcelLldlleifdlyeagqweealdeiekldllPl.aegdleevrekveefkslseevakvipdlLlat 574
                 e++v+L ++++++y +n +i++kv+ knret +lLl  +e+f ++ ++++e++l  +++l++lPl +e+d   vr+ ++ef+ l++++ ++ip ++l++
  EPX73645.1 690 EKLVSLVKNMMNVYGKNPSIYSKVNYKNRETTDLLLLTVEAFHAFVNKDYEQVLAALQQLEILPLdTECDSHVVRKLAAEFRFLNDSLLHNIPGIILVA 788
                 368999***********************************************************999******************************* PP

                 HHHHHHHHHHHHSTT---TTHHH.HHHHHHHHHHHHHHHHHHGCCCS- CS
       Nic96 575 mtclskqyeqlknkqfesesked.kleelrqkakalmtfagmikyrmP 621
                 m++++++y+++k ++++s+s ++ kl+ +r ka+++++++++i +rmP
  EPX73645.1 789 MKSINELYKKQKLSDYNSDSVANtKLQFYRIKARKIVMYSSLIDFRMP 836
                 ************9****6666656***********************9 PP

>> Peptidase_C65  Peptidase C65 Otubain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   2.1e-05      0.19     148     220 ..     132     210 ..     116     227 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 2.1e-05
                    HHHHHTHHHHGGGS-TT.....--HHHHHHHHTSSTT--B-HHHHHHHHHHTT--EEEEESSSS.GBSTTSEEEEES-S CS
  Peptidase_C65 148 aelkthadeyepFldel.....stveeFceqevepvnkEaDnvqitaLaealgvkvrVeyldrs.vegesvnahafpee 220
                      ++  + ++ ++l+++       v+eF e+ v++++k a   q +a ++a+ ++++  y+d s +++ s   ++f + 
     EPX73645.1 132 TLIQDAQSQFDKYLETEwqgkkPGVREFSESTVSQEKKLATGTQNIARCQAFAASLKKCYFDISqSSPGSDYISSFCDV 210
                    5689999**********999999***************************************77445555445555433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (851 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       653  (0.0364214); expected 358.6 (0.02)
Passed bias filter:                      507  (0.0282782); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.28s 00:00:00.95 Elapsed: 00:00:00.43
# Mc/sec: 5962.24
//
Query:       EPX73646.1  [L=642]
Description: GTPase activating protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-14   54.3   0.1    1.4e-14   54.3   0.1    2.3  2  RabGAP-TBC       Rab-GTPase-TBC domain
  ------ inclusion threshold ------
      0.031   12.5  16.5      0.051   11.8  16.5    1.3  1  FPP              Filament-like plant protein, long coiled-coi
      0.038   14.5  22.2      0.099   13.2   6.1    2.6  2  APG6_N           Apg6 coiled-coil region
       0.34   10.5  12.9       0.24   11.0   9.1    2.5  3  DUF2968          Protein of unknown function (DUF2968)
       0.75    9.9  18.7          2    8.6  18.7    1.8  1  Tropomyosin_1    Tropomyosin like
        0.8    9.6   2.3         12    5.8   0.0    2.4  2  PepSY_TM_like_2  Putative PepSY_TM-like
       0.85    8.4  16.9      0.022   13.7  10.6    1.5  2  DUF812           Protein of unknown function (DUF812)
       0.97    9.1  19.7        1.9    8.2  19.7    1.4  1  DUF4201          Domain of unknown function (DUF4201)
        1.5    8.1  22.0        5.5    6.3  22.0    2.0  1  GAS              Growth-arrest specific micro-tubule binding
        1.8    9.0  18.8       0.51   10.8  15.5    1.7  2  Fez1             Fez1
        2.4    8.2  16.7         11    6.1   7.4    2.9  2  CtIP_N           Tumour-suppressor protein CtIP N-terminal do
        2.7    7.9  10.4        1.6    8.6   3.4    2.6  2  TRAF_BIRC3_bd    TNF receptor-associated factor BIRC3 binding
        8.4    6.8  17.5         18    5.7   3.6    2.9  2  BLOC1_2          Biogenesis of lysosome-related organelles co


Domain annotation for each model (and alignments):
>> RabGAP-TBC  Rab-GTPase-TBC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.3   0.1     1e-17   1.4e-14       3     214 ..     222     429 ..     220     430 .. 0.82
   2 ?   -1.5   1.6       1.2   1.6e+03      28      70 ..     586     626 ..     541     633 .. 0.60

  Alignments for each domain:
  == domain 1  score: 54.3 bits;  conditional E-value: 1e-17
  RabGAP-TBC   3 lRgevWklllgyepevkrlkksekkqeksekekskleks.eeskelsqIkkDvprtfp...es.esfknkqgqnqLeriLkaysiynpevgYcqGmndi 96 
                 +R+ vW++l+ +e           ++    +    ++++  ++ + ++I++   r      +  +  + k   n L+++L+a+ + +  v+Y  +    
  EPX73646.1 222 CRKCVWQTLVTAER----------NELLTLYATLSTSTNsLDPVIKRTIRNNAFRGPLepfKYaSPTRAKVSTNGLFHVLHAFTLFDTTVEYALDALLW 310
                 68889999988832..........2222222223333330333457888888888755555335788888999********************877777 PP

  RabGAP-TBC  97 vaplllvsldeeeaFwcfvsLlekyklrdlytsslpglkrklk.vleellkkkdpklykhlkeegldlelfaikwfltlflrefpletvlrlwD.llle 193
                  a  ll ++++ ++F  ++ Ll k +l++ly  +l+   ++l+ ++  ++++  pk++  l++++ ++   +++ + ++f++++ l+ +lr++D +++ 
  EPX73646.1 311 PAASLLSYMPQGNVFRSLACLLGKSNLKELYVANLSTSDEQLYaLVWGCISDLSPKIALSLQRIKAQSLRPLYSSLACCFAKSLTLQDSLRILDlVFCY 409
                 777777*******************************9999997889***********************************************9999* PP

  RabGAP-TBC 194 gekfvllrvalailklleeel 214
                 g ++ ++r+ +ai+ + ee+l
  EPX73646.1 410 GLET-FVRLLVAIFLKDEEKL 429
                 **99.9999999887766776 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 1.2
  RabGAP-TBC  28 qeksekeksklekseeskelsqIkkDvprtfpesesfknkqgq 70 
                   k+ ++k +++++++ +++  +++ ++rt++  + ++ ++ +
  EPX73646.1 586 VLKNRNQKFEESNASSVQQITYLNEELERTLR--QLHDLENKH 626
                 33333344444444444456777788888888..333333333 PP

>> FPP  Filament-like plant protein, long coiled-coil
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8  16.5   3.7e-05     0.051     684     814 ..     507     638 ..     475     642 .] 0.85

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.7e-05
         FPP 684 eskkeenkllkeeleelksekenlevelksatenleslkaqlqesEqllaelkseLeslkeskslaetqlkc..mkesyesletrateleaelnelkqk 780
                 ++ k +nk l+e++ el+s+   l+ e  + + +l +  +  +esE++++ l+  +++l+e  + + +qlk+  ++e+   l  r +++e+   +  q+
  EPX73646.1 507 NELKIQNKDLSENIAELESRMVILNRENTKLSTELSNHRVLRSESEEKIDYLENSIATLEEQARNLPEQLKKslQQEI-IVLKNRNQKFEESNASSVQQ 604
                 2225688999************************************************************98323444.459**********99***** PP

         FPP 781 ieaLeveLeeekksheeleakckelqeqlervek 814
                 i+ L++eLe   +  ++le k  +lq + ++v+k
  EPX73646.1 605 ITYLNEELERTLRQLHDLENKHSQLQARWDSVSK 638
                 *****************************99986 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   6.1   7.2e-05     0.099      69     132 ..     505     568 ..     498     569 .. 0.94
   2 ?    5.8  11.2     0.014        19      48     123 ..     561     637 ..     558     642 .] 0.80

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 7.2e-05
      APG6_N  69 eLkelekereeleaelaaleeelealeeeeerfwreynelqlelleleeeldsleaqyehaqnq 132
                  L+el+ ++++l + +a+le+    l++e+++  +e +++++  +e ee+ d le++++  ++q
  EPX73646.1 505 MLNELKIQNKDLSENIAELESRMVILNRENTKLSTELSNHRVLRSESEEKIDYLENSIATLEEQ 568
                 699*****************************************************99887665 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.014
      APG6_N  48 eleeleeelekl.ekeeeelleeLkelekereeleaelaaleeelealeeeeerfwreynelqlelleleeeldsle 123
                 +++ lee+ ++l e+ +++l++e+  l++ +++ e+  a+  ++   l+ee er +r+ ++l+ ++++l+ + ds+ 
  EPX73646.1 561 SIATLEEQARNLpEQLKKSLQQEIIVLKNRNQKFEESNASSVQQITYLNEELERTLRQLHDLENKHSQLQARWDSVS 637
                 56777777777635567788899999999999999999999999999999999999999999999999999888876 PP

>> DUF2968  Protein of unknown function (DUF2968)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       1.2   1.7e+03      66     103 ..     224     261 ..     223     281 .. 0.81
   2 ?   -0.6   0.1      0.65     9e+02     141     178 ..     497     534 ..     492     536 .. 0.81
   3 ?   11.0   9.1   0.00017      0.24      90     178 ..     537     626 ..     529     628 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.2
     DUF2968  66 kelWrviktqdearAeaiYadfarqtaelaeveirrik 103
                 k +W  + t++ ++  ++Ya+++  t++l  v  r i+
  EPX73646.1 224 KCVWQTLVTAERNELLTLYATLSTSTNSLDPVIKRTIR 261
                 5689999999999999*******999999766555555 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.65
     DUF2968 141 erQkqarkeaaaLeaqreaaqaqlralqrqirqLqaqq 178
                 +rQ    +  + L+ q++++ +++ +l+ ++  L++++
  EPX73646.1 497 SRQTFRTNMLNELKIQNKDLSENIAELESRMVILNREN 534
                 57777777788999999999999999999999999887 PP

  == domain 3  score: 11.0 bits;  conditional E-value: 0.00017
     DUF2968  90 qtaelaeveirrikleaqkaqlerqiaasearaerLqadlavarqQeqavaerQkqarkeaaaLeaqr.eaaqaqlralqrqirqLqaqq 178
                  ++el++  + r + e + ++le+ ia+ e++a++L ++l+   qQe  v ++ +q  +e++a + q+ + + ++l+++ rq+++L++++
  EPX73646.1 537 LSTELSNHRVLRSESEEKIDYLENSIATLEEQARNLPEQLKKSLQQEIIVLKNRNQKFEESNASSVQQiTYLNEELERTLRQLHDLENKH 626
                 578999999999999999***********************************9999999999988772567999***********9875 PP

>> Tropomyosin_1  Tropomyosin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6  18.7    0.0014         2       2     126 ..     506     635 ..     495     642 .] 0.85

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0014
  Tropomyosin_1   2 lnsLkleaeeaqekaeeleekvKeleqenlekeqeiksLtkknqqleeevekleeklk...eakekaeesekkktnne..altrkiqlLEeelees 92 
                    ln+Lk+ + +  e   ele+++  l+ en++   e+++     ++ ee+++ le+++    e+ +++ e+ kk+ ++e   l+ ++q  Ee   +s
     EPX73646.1 506 LNELKIQNKDLSENIAELESRMVILNRENTKLSTELSNHRVLRSESEEKIDYLENSIAtleEQARNLPEQLKKSLQQEiiVLKNRNQKFEESNASS 601
                    799***********************************99999999999999998765000555556678888888888899************** PP

  Tropomyosin_1  93 dkkLkettekLretdvkaeelERkvkaLeqerde 126
                     ++++  +e L+ t  +  +lE k  +L+++ d 
     EPX73646.1 602 VQQITYLNEELERTLRQLHDLENKHSQLQARWDS 635
                    **********999988888888888877776554 PP

>> PepSY_TM_like_2  Putative PepSY_TM-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0    0.0086        12      70     117 ..      27      74 ..      14      82 .. 0.85
   2 ?    2.5   1.1      0.09   1.2e+02      42      85 ..     564     624 ..     506     641 .. 0.68

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0086
  PepSY_TM_like_2  70 peelaqwlkkqlalsaakreaewsddevylslprpggdasllidretg 117
                       e+l   +++ ++ s  +++ e s +e++l+++ pg + +++i  et 
       EPX73646.1  27 KENLSTIHATSMESSRSSKSSESSLKEISLDYSSPGLQPQAAIPEETN 74 
                      467888899999999999999*****************9999987765 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.09
  PepSY_TM_like_2  42 svtekelelpeellallkeeakkeela.................lpeelaqwlkkqlalsa 85 
                      + +e++ +lpe+l++ l++e+   +++                 l eel+  l++ ++l++
       EPX73646.1 564 TLEEQARNLPEQLKKSLQQEIIVLKNRnqkfeesnassvqqityLNEELERTLRQLHDLEN 624
                      3445555666666666666654433333445556666666666655555555555555555 PP

>> DUF812  Protein of unknown function (DUF812)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.4       2.6   3.6e+03     232     285 ..      33      86 ..      18     156 .. 0.49
   2 ?   13.7  10.6   1.6e-05     0.022     316     454 ..     490     629 ..     448     642 .] 0.78

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 2.6
      DUF812 232 lasrlteeeykkrkkeklqkrlaeqlrkaalkseeaessasksksdlaellsef 285
                 ++ +  e+   ++ +e+ +k+++  +++  l++++a++++ +s+    ++l+  
  EPX73646.1  33 IHATSMESSRSSKSSESSLKEISLDYSSPGLQPQAAIPEETNSNYANISMLRPT 86 
                 233322333333345555666666666666666666633333333333334444 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 1.6e-05
      DUF812 316 kkaeteeelkkkreeeleelqeqieeleskieeleeeikklessikqveeeleeekeeneelekevklkkktlellpdaeeni.ekLqalveasaqrlv 413
                 + +et   +++ r + l+el+ q ++l+++i+ele+ +  l+ + ++++ el +++  ++e e++++  +  ++ l+++  n+ e+L++ +++    l+
  EPX73646.1 490 SYHETAISRQTFRTNMLNELKIQNKDLSENIAELESRMVILNRENTKLSTELSNHRVLRSESEEKIDYLENSIATLEEQARNLpEQLKKSLQQEIIVLK 588
                 455666677888999999*************************************************9999999996655555389************* PP

      DUF812 414 elakqWekhRvplieeyrelkesksekekeaerkleeikkl 454
                 +  +++e+  +  ++++  l e+ +++  +  +  ++  +l
  EPX73646.1 589 NRNQKFEESNASSVQQITYLNEELERTLRQLHDLENKHSQL 629
                 **************999999999887765554444444444 PP

>> DUF4201  Domain of unknown function (DUF4201)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2  19.7    0.0014       1.9      45     174 ..     507     632 ..     498     642 .] 0.83

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0014
     DUF4201  45 eqlqienqalnkkIeernkeLkrlkkkttktvhalthlkeklhmleselselkkelkekeerlaklrkelyk.vklerdklrkqneklkqqggllrvPa 142
                 + l+i+n+ l+++I+e +  ++ l +  tk + +l++ +  +++ e++   l++++ ++ee+ + l ++l k +++e   l+++n+k++++++  +v +
  EPX73646.1 507 NELKIQNKDLSENIAELESRMVILNRENTKLSTELSNHRVLRSESEEKIDYLENSIATLEEQARNLPEQLKKsLQQEIIVLKNRNQKFEESNAS-SVQQ 604
                 689*******************************************************************873677778889999999998887.7777 PP

     DUF4201 143 LlkDYdktkekveekrksvkkLrrkvkilemr 174
                 +++      e++e    ++  L+ k+ +l+ r
  EPX73646.1 605 ITY----LNEELERTLRQLHDLENKHSQLQAR 632
                 766....4455555556666666666666655 PP

>> GAS  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3  22.0     0.004       5.5      45     178 ..     502     632 ..     492     642 .] 0.75

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.004
         GAS  45 nekelseisqenkrlkepLkkaeeeveeLrkqlknyekdkqslknlkarlkelekelkdlkwehevleqrfekvekerdelykkfeaaiqevqqktglk 143
                  ++ l+e++ +nk+l+e++ ++e  +  L+++  + +    +l n +   +e+e+++  l+ +   le++  ++ ++ ++  ++   +++   qk +  
  EPX73646.1 502 RTNMLNELKIQNKDLSENIAELESRMVILNRENTKLS---TELSNHRVLRSESEEKIDYLENSIATLEEQARNLPEQLKKSLQQEIIVLKNRNQKFEES 597
                 567899************************9766555...47777777777788888888888888888888888888888888888888888888888 PP

         GAS 144 nllLekklkalqeelEkkeaqleevlaaanldpaa 178
                 n    ++++ l+eelE+   ql+++ ++++  +a 
  EPX73646.1 598 NASSVQQITYLNEELERTLRQLHDLENKHSQLQAR 632
                 88888888888888888888888776666555555 PP

>> Fez1  Fez1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1       5.6   7.8e+03      39      59 ..      29      49 ..      19      98 .. 0.53
   2 ?   10.8  15.5   0.00037      0.51      27     159 ..     500     634 ..     496     641 .. 0.75

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 5.6
        Fez1 39 qlrelrakleekeeeikelee 59
                +l  ++a+  e+ ++ k+ e+
  EPX73646.1 29 NLSTIHATSMESSRSSKSSES 49
                222222222222222222222 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00037
        Fez1  27 tqklseivalkaqlrelrakleekeeeikeleesleektlelevcenelqrkkseaellrekvekleeelkelreelselsleeeeaalesdeakaqrq 125
                 t +++ + +lk q ++l++++ e e+++  l+ + ++ ++el +     ++++++ + l++ + +lee+ ++l e+l++ sl++e  +l+ +++k +++
  EPX73646.1 500 TFRTNMLNELKIQNKDLSENIAELESRMVILNRENTKLSTELSNHRVLRSESEEKIDYLENSIATLEEQARNLPEQLKK-SLQQEIIVLKNRNQKFEES 597
                 5567777789*********************999988888888877777777888899***************999999.4455555566666666655 PP

        Fez1 126 e...aeeleelkreverlraeLkeerqkkeeqassFe 159
                 +    ++++ l++e+er  ++L+  ++k+ + ++ ++
  EPX73646.1 598 NassVQQITYLNEELERTLRQLHDLENKHSQLQARWD 634
                 5333455666667777777777766666666666665 PP

>> CtIP_N  Tumour-suppressor protein CtIP N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   6.4     0.048        67      45     120 .]     507     577 ..     494     577 .. 0.83
   2 ?    6.1   7.4    0.0081        11      56     107 ..     560     614 ..     552     630 .. 0.64

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.048
      CtIP_N  45 qqlreqqkalkenikvlenrLraglCdrCavtqelakkkqqefessklqslqlitiLtnEmntLkeenkkLkeelk 120
                 ++l+ q+k l+eni  le+r+   + +  + + el  ++       + +s ++i  L+n   tL+e+ ++L e+lk
  EPX73646.1 507 NELKIQNKDLSENIAELESRMVILNRENTKLSTELSNHRVL-----RSESEEKIDYLENSIATLEEQARNLPEQLK 577
                 56889999999999999999998888888888887766655.....567789999999999999999999999986 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0081
      CtIP_N  56 enikvlenrLraglCd.rCavtqe..lakkkqqefessklqslqlitiLtnEmnt 107
                 ++i +le++ r    + + + +qe  ++k+++q fe+s+  s+q+it L++E ++
  EPX73646.1 560 NSIATLEEQARNLPEQlKKSLQQEiiVLKNRNQKFEESNASSVQQITYLNEELER 614
                 4444444444433222123334442246999999****************99875 PP

>> TRAF_BIRC3_bd  TNF receptor-associated factor BIRC3 binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   3.4    0.0011       1.6      16      59 ..     523     566 ..     508     569 .. 0.85
   2 ?    3.0   0.6     0.065        90       8      46 ..     586     631 ..     579     641 .. 0.66

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0011
  TRAF_BIRC3_bd  16 FEnIVsVLnrEverssttieaverqrrldqekieaLekKvrqLe 59 
                     E    +LnrE  + st++ + +  r + +eki+ Le+ ++ Le
     EPX73646.1 523 LESRMVILNRENTKLSTELSNHRVLRSESEEKIDYLENSIATLE 566
                    5566679**********************************998 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.065
  TRAF_BIRC3_bd   8 aLetkvatFE..n.....IVsVLnrEverssttieaverqrrldqe 46 
                     L ++++ FE  n      ++ Ln E er   ++ ++e  + + q 
     EPX73646.1 586 VLKNRNQKFEesNassvqQITYLNEELERTLRQLHDLENKHSQLQA 631
                    5555555555221111114788********9999999998887665 PP

>> BLOC1_2  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   8.6     0.026        36      20      89 ..     504     577 ..     492     584 .. 0.78
   2 ?    5.7   3.6     0.013        18       6      69 ..     575     638 ..     571     642 .] 0.79

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.026
     BLOC1_2  20 edyklLeklNeaasekykklkdvaaslekkleklnekyeel....qpylqqidqiekqvteLeeavseLDeysk 89 
                 + ++ L+  N+  se++++l++++  l+++  kl+ +  +     ++  ++id +e+++++Lee +  L e  k
  EPX73646.1 504 NMLNELKIQNKDLSENIAELESRMVILNRENTKLSTELSNHrvlrSESEEKIDYLENSIATLEEQARNLPEQLK 577
                 567778889****************99999999887555431111456689*************9999966655 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.013
     BLOC1_2   6 kvskyleaeleatvedyklLeklNeaasekykklkdvaaslekkleklnekyeelqpylqqidq 69 
                 +++k l++e+ + ++  +  e+ N ++ ++++ l+++++ + ++l++l++k+ +lq   +++ +
  EPX73646.1 575 QLKKSLQQEIIVLKNRNQKFEESNASSVQQITYLNEELERTLRQLHDLENKHSQLQARWDSVSK 638
                 5677788888888888888888888888888888888888888888888888888887777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (642 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1695  (0.0945396); expected 358.6 (0.02)
Passed bias filter:                      627  (0.0349713); expected 358.6 (0.02)
Passed Vit filter:                       105  (0.00585643); expected 17.9 (0.001)
Passed Fwd filter:                        36  (0.00200792); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.84u 0.29s 00:00:01.12 Elapsed: 00:00:00.45
# Mc/sec: 4301.91
//
Query:       EPX73647.1  [L=285]
Description: phosphoglycerate mutase family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-33  116.2   0.0    1.8e-33  115.9   0.0    1.1  1  His_Phos_1  Histidine phosphatase superfamily (branch 1)
  ------ inclusion threshold ------
      0.014   14.8   0.0       0.02   14.3   0.0    1.2  1  ZnuA        Zinc-uptake complex component A periplasmic


Domain annotation for each model (and alignments):
>> His_Phos_1  Histidine phosphatase superfamily (branch 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.9   0.0     2e-37   1.8e-33       2     192 ..      61     251 ..      60     253 .. 0.88

  Alignments for each domain:
  == domain 1  score: 115.9 bits;  conditional E-value: 2e-37
                 EEEE---BTTB--....TT----B-HHHHHHHHHHHHHHTTS---EEEE-SSHHHHHHHHHHHHCTT--EEE-GGGS----GGGTT-B.HHHHHH..HS CS
  His_Phos_1   2 yLvRHGetewnaegrlqgrtdvpLteeGreqAealaerlagepidaiysSplkRarqTaeliaealglpveldegLrEidfGdweglttaeiaeeypee 100
                 +LvRH+e+e+n++g+  g  d++Lt +G+ qA++la+ l++++++ iysSp  Ra++Ta+ ia+ +++p+ +   LrE d+G +eg +++  a+ +p+e
  EPX73647.1  61 LLVRHAESEHNVRGIRAGSIDSELTIHGYNQAKKLAKSLKEQNVRCIYSSPQIRAQRTAKEIAKVMNCPIFTSSLLREKDLGSLEGTSFRYTANYRPHE 159
                 79*************************************************************************************766666665544 PP

                 HHHHHHHHH-GGG-BS-BHHHHHHHHHHHHHHHHHHTTTSE......EEEEE-HHHHHHHHHHHHT--GGGGGGB--..-TT-EEEEEE-SS-EEEEEE CS
  His_Phos_1 101 leawlrdpadvrppggEsledvaaRvaaaleelaarheget......vlvVsHggvirallarllglpleelrrlel..dnaslsvlefdeggwrlvrl 191
                 +          r +g E+ + +  R++++ e l+ + e+        v++VsHg ++  ll+++l    + l+   l  +nas++ + +d +g +  ++
  EPX73647.1 160 PP--------MRVQGLENRDSLLHRAREFAESLLMEAEDSGfdasdvVVIVSHGLFLPFLLRAILAAVRTPLPSKILpwSNASYTSVAIDFEGNTTIEM 250
                 44........45666899*************999999988888999*******************66665555433457********999888877776 PP

                 E CS
  His_Phos_1 192 n 192
                 n
  EPX73647.1 251 N 251
                 6 PP

>> ZnuA  Zinc-uptake complex component A periplasmic
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   2.3e-06      0.02     180     233 ..      80     135 ..      58     151 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 2.3e-06
                 SSSS.....HHHHHHHHHHHHHTT-SEEEEETTS.-THHHHHHHHHHT-EEEEE-STSSS CS
                 xxxx.....xxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxx RF
        ZnuA 180 iste.....aaqiaalieeikeagvkaifvepla.spklaetlaeeagvkvatlysldsl 233
                 i++e      +q ++l++ +ke++v++i++ p++  +++a+++a+   v  +++ +  sl
  EPX73647.1  80 IDSEltihgYNQAKKLAKSLKEQNVRCIYSSPQIrAQRTAKEIAK---VMNCPIFT-SSL 135
                 4444666777899*******************8868999999999...55566666.444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (285 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       494  (0.0275531); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.74
# Mc/sec: 1168.83
//
Query:       EPX73648.1  [L=1665]
Description: SNF2 family ATP-dependent chromatin-remodeling factor snf22 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.9e-68  228.9   0.1    6.9e-68  228.9   0.1    1.7  2  SNF2_N       SNF2 family N-terminal domain
    6.5e-21   74.8   1.0      3e-19   69.4   0.0    3.8  4  Helicase_C   Helicase conserved C-terminal domain
      2e-17   63.0   0.0    6.2e-17   61.5   0.0    1.9  1  Bromodomain  Bromodomain
    1.7e-10   41.2   0.0    6.4e-10   39.3   0.0    2.1  1  ResIII       Type III restriction enzyme, res subunit
    4.9e-10   39.6   8.4      7e-08   32.7   8.4    2.7  2  HSA          HSA
    4.7e-08   32.6   3.3    1.2e-07   31.3   3.3    1.8  1  QLQ          QLQ
    7.8e-06   26.4   0.2    3.8e-05   24.2   0.2    2.4  1  SnAC         Snf2-ATP coupling, chromatin remodelling complex
  ------ inclusion threshold ------
       0.03   14.1   0.2       0.13   12.1   0.2    2.2  1  Shugoshin_C  Shugoshin C terminus


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.2   0.3       2.3   5.2e+03     251     265 ..     698     712 ..     659     752 .. 0.52
   2 !  228.9   0.1   3.1e-71   6.9e-68      49     349 ..     867    1150 ..     836    1151 .. 0.87

  Alignments for each domain:
  == domain 1  score: -4.2 bits;  conditional E-value: 2.3
                 HHHHHHHHHHHTT-S CS
                 xxxxxxxxxxxxxxx RF
      SNF2_N 251 aqaekgrsrLlqllq 265
                 +q+ek  s L+++lq
  EPX73648.1 698 KQKEKLLSHLRSILQ 712
                 222222222222222 PP

  == domain 2  score: 228.9 bits;  conditional E-value: 3.1e-71
                  HHHHHTT--EEE---TTS--HHHHHHHHH...HHTTTS---.......S-EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH----------- CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N   49 aeakqsvrGGiLaDemGLGKTvqvlalilaqrakeekdkekkrkdtlagptLivvPaslldqWeneierhvsssalrvlvyggqkkmkkkntkvapk 145 
                  +++++++ +GiLaDemGLGKTvq++a+i+   +  ek++++       gp+Li+vP s+l++W  e+e++++s +   ++y g    + ++  + + 
  EPX73648.1  867 LSLYNNNLNGILADEMGLGKTVQTIAFIT---YLIEKKNNP-------GPFLIIVPLSTLTNWNLEFEKWAPSVTK--ITYRGPP--QLRKAYQMQI 949 
                  678999***********************...877777777.......************************9965..5555543..4555677788 PP

                  ------EEEE-HHHHHHHT......TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH.---S-EEEE-S--SSS-HHHHHHHHHHH-TTTT--HHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  146 lladydvvittYdvlsreaelqkkrsvlkqvewkrvvlDEghtlknstskaaeavsk.LstsnrwiltGTPiqnsledlygLlkfLreepfgekqtf 241 
                    ++++v++tt+d++ ++         l++v+w + ++DEgh+lkn++sk++ ++++ + +++r+iltGTP+qn+l +l++Ll+ + +++f++ ++f
  EPX73648.1  950 KSNNFNVLLTTFDYIIKDR------PLLSKVKWLYSIIDEGHRLKNTQSKLTSTLCSyYHSQYRLILTGTPLQNNLPELWALLNVVLPKIFNSVKSF 1040
                  8899************777......9***************************9999789************************************* PP

                  HHHTHHHHH............HHHHHHHHHHHTT-STTEE---GGGT--S---EEEEEEEEE--HHHHHHHH....................HHHHH CS
                  xxxxxxxxx............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  242 dkllqrpie............aqaekgrsrLlqllqrlmlrrakkdveknlPpkteeiiflklskverksYnrllevlrkkalakllkrseaalkss 326 
                  d+++++p++            +++   ++rL+++l++++ rr kkdve +lP+k+e++i ++ls  + k+Y+   +++ + +l +   + +  +   
  EPX73648.1 1041 DEWFNTPFAntggqdkfelteEESLLVIKRLHKVLRPFLFRRLKKDVESELPDKVEKVIKCPLSGLQFKLYQ---QMKKHGMLFVAGDKGKTGM--- 1131
                  *****************99877778889********************************************...2222222222222222222... PP

                  H-HHH-HHHHHHHHHHHHH---X CS
                  xxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  327 skskekilelllelrqacnhpql 349 
                      +++ +++++l+++cnhp +
  EPX73648.1 1132 ----KVLQNTVMQLKKICNHPFI 1150
                  ....3366889*********986 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.1      0.72   1.6e+03      33      64 ..     727     756 ..     667     816 .. 0.81
   2 ?   -1.4   0.0       1.3   2.9e+03       3      73 ..     891     960 ..     889     962 .. 0.76
   3 !   69.4   0.0   1.3e-22     3e-19       2     111 .]    1174    1287 ..    1173    1287 .. 0.87
   4 ?    0.1   0.0      0.46     1e+03      20      68 ..    1574    1622 ..    1565    1626 .. 0.74

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.72
                 HHHHHHTTSTEEEESTTSTHHHHHHHHHHHHT CS
  Helicase_C  33 klllekkgikvavlhgelpqnereeileqfnk 64 
                 k+   + g  v +lh   +++e+++i ++ ++
  EPX73648.1 727 KYS--QMGKDVMCLHTHYEKEEKKRIEKSARA 756
                 333..448889999999999999999888765 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1.3
                 HHHHHHHHHHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEES CS
  Helicase_C   3 leallellkleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfnkgesdvLiat 73 
                 ++ +++l++++++ g  li+v+  +  +  +l  ek + +v++++ + p + r++   q ++++++vL++t
  EPX73648.1 891 IAFITYLIEKKNNPGPFLIIVPLSTLTN-WNLEFEKWAPSVTKITYRGPPQLRKAYQMQIKSNNFNVLLTT 960
                 5667777888888888888888888553.222234557788888888899999999999999999999988 PP

  == domain 3  score: 69.4 bits;  conditional E-value: 1.3e-22
                  HHHHHHHHH.HHTTTTSEEEEEESSHHHHHH.HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH..TTSSS.EEEESGGGTSSSTSTTESEEEESSS CS
  Helicase_C    2 kleallell.kleeeggkilifvntidrlek.vklllekkgikvavlhgelpqnereeileqfn..kgesd.vLiatdvaerGidipkvnlVinfdl 93  
                  k+e l ++l kl + g+k+lif + ++ +    ++l + ++ k+++l+g++++++r + l+qfn  + ++  ++++t++++ G++++ +++Vi+fd 
  EPX73648.1 1174 KFELLDRILpKLFKTGHKTLIFFQMTQIMTImEDYL-RYRNWKYLRLDGSTKSEDRSDLLSQFNdpASDIYvFMLSTRAGGLGLNLQTADTVIIFDT 1269
                  6677888889999**************554435777.5557***********************6644544578*********************** PP

                  SSSHHHHHHHHTTSSSTT CS
  Helicase_C   94 prnvtsyiqriGRtgRag 111 
                  ++n+++  q+ +R++R+g
  EPX73648.1 1270 DWNPHQDLQAQDRAHRIG 1287
                  ****************97 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 0.46
                  EEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSS CS
  Helicase_C   20 lifvntidrlekvklllekkgikvavlhgelpqnereeileqfnkgesd 68  
                  l+f+n  +  e+++ + e  ++   +l++ l++ ere+i+e++ k+e+d
  EPX73648.1 1574 LMFSNAYTYNEEFSPVYEDAKFMERTLTSILEKFERERIFEKYEKEEFD 1622
                  556666664443333445557777889999*************999987 PP

>> Bromodomain  Bromodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.5   0.0   2.7e-20   6.2e-17      14      83 ..    1525    1594 ..    1511    1595 .. 0.95

  Alignments for each domain:
  == domain 1  score: 61.5 bits;  conditional E-value: 2.7e-20
                   GGGGCSTT-GCCSTTHHHH.SS---HHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHSHTTSHHHHHHH CS
  Bromodomain   14 aepFlepvdpeefpdyyavikkPldLstIkkklesnkYksladfeadlkllfsNarkyngegsviyelae 83  
                   +  Fl p++++ +pdyy +ik+P+ L +I ++++++ Y+ l+ +  d+ l+fsNa++yn+e s++ye+a+
   EPX73648.1 1525 NGLFLYPPSRKLYPDYYVIIKHPIALGKIGRNIKNGRYTELQGLVSDFMLMFSNAYTYNEEFSPVYEDAK 1594
                   668*****************************************************************96 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.3   0.0   2.9e-13   6.4e-10       3     169 ..     854    1014 ..     852    1016 .. 0.82

  Alignments for each domain:
  == domain 1  score: 39.3 bits;  conditional E-value: 2.9e-13
                  EE-HHHHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S......-EEEEESSHHHHHHHHHHGGGGTGG........GEEEESSS-B CS
      ResIII    3 elreyQeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkee.kflflvprkslleqtleefkkflseayke....igkkvsgdkk 94  
                  +l++yQ + +e +l+ +  +++ +g+++ + G GKT+  +++i +l +k+++   fl++vp  +l+  +  ef+k++++ +k              +
  EPX73648.1  854 NLKDYQLKGLEWMLSLY--NNNLNGILADEMGLGKTVQTIAFITYLIEKKNNPgPFLIIVPLSTLT-NWNLEFEKWAPSVTKItyrgP-------PQ 940 
                  57888888888777555..8999************************99888799******88886.58899******9865443322.......22 PP

                  --...........-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS..TTTHH.HHHT---SEEEEEESS- CS
      ResIII   95 ka....kekdstnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgak.kswre.ilekfkeavllglTATp 169 
                   +     +++s+n ++l+tt + + +d+         l++ + ++ iiDE Hrl+   ++ ++ +  ++ ++++l lT+Tp
  EPX73648.1  941 LRkayqMQIKSNNFNVLLTTFDYIIKDR-------PLLSKVKWLYSIIDEGHRLKNTqSKLTStLCSYYHSQYRLILTGTP 1014
                  22234455799*****************.......778999999**********99743555547899999*********9 PP

>> HSA  HSA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.7   8.4   3.1e-11     7e-08       7      71 .]     698     762 ..     696     762 .. 0.96
   2 ?    3.9   0.0      0.03        68      15      50 ..     970    1005 ..     966    1007 .. 0.93

  Alignments for each domain:
  == domain 1  score: 32.7 bits;  conditional E-value: 3.1e-11
                 XXX--HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH--XXXXXXXXXXXXXXXXXXX.. CS
         HSA   7 rqkthhdylLeeilwhakdfkeerkskrakakklaravakyhnniekeeqkriereekerlkalk 71 
                 +qk +    L +il+h+k + + + ++++k +++++ v+  h++ ekee+krie+ ++ rl+al+
  EPX73648.1 698 KQKEKLLSHLRSILQHGKSVSNKASNRKQKYSQMGKDVMCLHTHYEKEEKKRIEKSARARLQALR 762
                 589999999******************************************************95 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.03
                  HHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-- CS
         HSA   15 lLeeilwhakdfkeerkskrakakklaravakyhnn 50  
                  lL  ++w++  + e ++ k ++ k  +  ++ yh++
  EPX73648.1  970 LLSKVKWLYSIIDEGHRLKNTQSKLTSTLCSYYHSQ 1005
                  8999******************************86 PP

>> QLQ  QLQ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.3   3.3   5.3e-11   1.2e-07       1      35 []     426     461 ..     426     461 .. 0.97

  Alignments for each domain:
  == domain 1  score: 31.3 bits;  conditional E-value: 5.3e-11
         QLQ   1 aFtaqQlqeLkaQilAfKyLsknq.PvPpeLqqaiq 35 
                 aF++ Ql +Lk+Qi+A+  L +   ++P+ +q+ai+
  EPX73648.1 426 AFNPVQLSLLKNQIMAYNSLNSPFgQIPQPIQKAIF 461
                 7***********************99*********7 PP

>> SnAC  Snf2-ATP coupling, chromatin remodelling complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.2   1.7e-08   3.8e-05      14      69 ..    1389    1443 ..    1369    1451 .. 0.74

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 1.7e-08
                  ......----SS-------------------HHHHHHHHHHHH-XXXXXXXXXXXX CS
        SnAC   14 dgserkplpsRLleeseLPefyekdgveekkeekeeldeqlygrgkRaRkevsYeD 69  
                  d   + +   RLl  +eLPe+y+++ +   k+++e+      gr+kR+R +vsY +
  EPX73648.1 1389 DIYGKGKALDRLLSVNELPEIYRAEVDHVVKDASEDIP-FDAGRQKRQRASVSYAE 1443
                  4444555689**************85555555555555.559************97 PP

>> Shugoshin_C  Shugoshin C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.2   5.8e-05      0.13       1      16 [.    1430    1444 ..    1430    1445 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 5.8e-05
  Shugoshin_C    1 gRpsRrarkvvsYKEP 16  
                   gR +R++ ++vsY+EP
   EPX73648.1 1430 GRQKRQR-ASVSYAEP 1444
                   7999**6.******** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1665 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1298  (0.0723967); expected 358.6 (0.02)
Passed bias filter:                      471  (0.0262703); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 1.02u 0.28s 00:00:01.30 Elapsed: 00:00:00.53
# Mc/sec: 9492.02
//
Query:       EPX73649.1  [L=827]
Description: ATP-binding cassette-type vacuolar membrane transporter Hmt1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.2e-39  135.7   9.6    4.1e-39  134.9   9.6    1.5  1  ABC_membrane  ABC transporter transmembrane region
    6.8e-32  110.8   0.0    1.2e-31  110.1   0.0    1.4  1  ABC_tran      ABC transporter
    5.7e-07   29.2   0.1    3.9e-06   26.5   0.1    2.0  1  SMC_N         RecF/RecN/SMC N terminal domain
     0.0032   17.7   0.0      0.019   15.2   0.0    2.2  1  AAA_22        AAA domain
  ------ inclusion threshold ------
      0.012   15.5   0.2      0.028   14.2   0.1    1.7  1  AAA_21        AAA domain, putative AbiEii toxin, Type IV TA s
      0.014   15.1   0.0      0.024   14.4   0.0    1.3  1  AAA_15        AAA ATPase domain
      0.017   15.3   0.1       0.46   10.6   0.1    2.5  2  DUF4079       Protein of unknown function (DUF4079)
      0.029   14.1   0.0      0.051   13.3   0.0    1.4  1  AAA_24        AAA domain
       0.05   13.5   0.0      0.099   12.5   0.0    1.4  1  RsgA_GTPase   RsgA GTPase
      0.084   13.1   0.2        1.5    9.1   0.2    2.6  1  SbcCD_C       Putative exonuclease SbcCD, C subunit
      0.086   12.1   0.0       0.16   11.3   0.0    1.3  1  Zeta_toxin    Zeta toxin
       0.11   12.2   0.1       0.24   11.2   0.1    1.5  1  AAA_29        P-loop containing region of AAA domain
       0.14   12.5   0.0       0.88   10.0   0.0    2.1  1  AAA           ATPase family associated with various cellular 
        5.3    7.4   7.5       0.34   11.3   0.2    2.5  2  Comm          Commissureless


Domain annotation for each model (and alignments):
>> ABC_membrane  ABC transporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.9   9.6   3.2e-42   4.1e-39       1     274 []     259     532 ..     259     532 .. 0.99

  Alignments for each domain:
  == domain 1  score: 134.9 bits;  conditional E-value: 3.2e-42
                   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTHHHHHHSCH CS
  ABC_membrane   1 liliillailagvlsplfplvlgrildtlldkgdpetealnvysllllllglaqfilallqsyllnvtgerlskrlrrklfkkilrqpmsffdtnsv 97 
                   +++++ll+i++ ++++l p  lg ++++l+++++   +  +++++++ +l   +++++ l+s+l++ +++++ ++l +k+++++l ++  f+ +++ 
    EPX73649.1 259 VFVCVLLLIFGRIANILAPRQLGVVTEKLSETNSGVPWFEVLLFVFYRFLQGNMGLVGSLRSFLWIPVSQYAYRALSTKALQHVLGLSYDFHLNKRG 355
                   58899***************************9999989999******************************************************* PP

                   HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH.HSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH CS
  ABC_membrane  98 Gellsrltndvsklrdglgeklglffqslltfvgglivmfy.lgwkltlvllailpliilvsaviakilkklkkkeqkavakassvaeEslsgirtV 193
                   Ge+l+ lt  ++++++++ + l+++   l+ + +++i+ f+ + ++++lv+l++++++++v++ i+++ +++++k+ +++ +++ v ++++++++tV
    EPX73649.1 356 GEVLAALT-KANSVNTFVEQLLFQIGPVLTDLAVAIIYFFVkFDVYFSLVVLVMTFCYCYVTVKITSWRTEARRKMVNSWRDSYGVQNDAIMNYETV 451
                   *******8.9999************************************************************************************ PP

                   HHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSTHHHHHHHHHHHHHHHHHH CS
  ABC_membrane 194 kafgreeyflekfekaleeakkagikkaianglligitqllgllsyalalwfGttlvisgelsvgdlvvflslfailfgal 274
                   k+f + e+++++f +a+++++ +  +++ + ++l++i+  +++ s  +a++++++ v+ g  +vgd+vv+l+++++l+++l
    EPX73649.1 452 KNFDADEFENHRFGDAVDKYLLQENTVLSSLSVLNIIQGGIFTSSLCVACLLSAYKVSFGYNTVGDFVVLLTYMTQLQQPL 532
                   ******************************************************************************996 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.1   0.0   9.3e-35   1.2e-31       1     137 []     594     743 ..     594     743 .. 0.91

  Alignments for each domain:
  == domain 1  score: 110.1 bits;  conditional E-value: 9.3e-35
                 EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH.......HHHTCHHHHHHHS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxx RF
    ABC_tran   1 lknvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren.......esdeeiekalskl 92 
                 l+nv++  ++g+++a+vGe+G GKSt++++l++  + + G+i++d++d+++ +l+slr++igv+pq++ lf+++ v  n       +s+ee+++a++  
  EPX73649.1 594 LSNVNFVAEPGKVIALVGESGGGKSTIMRILLRFFDVNDGSITIDDQDVRDVTLSSLRSSIGVVPQDSILFNDT-VMYNikyakpsASNEEVYEAAKAA 691
                 689***********************************************************************.666669****96666766666666 PP

                 TTGG.......TTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 xxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  93 glke.......lkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137
                 ++++         +++v++++ +LSgG+kqr+a+ara+lk+p+++llDE+t+
  EPX73649.1 692 QIHDrilefpdGYHSRVGERGLKLSGGEKQRMAVARAILKNPTIILLDEATS 743
                 666666666667799999********************************96 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.1     3e-09   3.9e-06      96     212 ..     620     786 ..     595     792 .. 0.88

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 3e-09
                 CEEEEEEEETTSEEEEEETTEEE-HHHHHHHHHCTT-STT......................................................CS-HH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......................................................xxxxx RF
       SMC_N  96 evsisrrvkrkgeseykingkevtkkevsellesagiske......................................................lLSgG 140
                  + i  r +  ++ +++i++++v+   +s+l +s g+ ++                                                       LSgG
  EPX73649.1 620 IMRILLRFFDVNDGSITIDDQDVRDVTLSSLRSSIGVVPQdsilfndtvmynikyakpsasneevyeaakaaqihdrilefpdgyhsrvgerglKLSGG 718
                 46677778888888999999999999999999999999999999999999999999999999999999999999999********************** PP

                 HHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC-SCEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 141 ektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemlekadklvgvt 212
                 ek+ +a+a   Ai   k   + llDe  +aLD +  + +   l++       ivi++r  ++++ad ++ ++
  EPX73649.1 719 EKQRMAVAR--AI--LKNPTIILLDEATSALDTNTERHIQASLNRLAAGRTAIVIAHRLSTITNADLILCIS 786
                 **9877764..44..5667899*******************************************9887765 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   1.5e-05     0.019       5      38 ..     604     638 ..     601     769 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.5e-05
      AAA_22   5 agilvvtGesGtGKTtllrrlleqldeeakaee.e 38 
                  ++++++GesG GK+t +r ll+ +d      +  
  EPX73649.1 604 GKVIALVGESGGGKSTIMRILLRFFDVNDGSITiD 638
                 6799********************98644333342 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.1   2.2e-05     0.028       2      39 ..     607     651 ..     606     713 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.2e-05
      AAA_21   2 nvliGpNgsGKSnLLdaldllarl........drdvegltdelsgg 39 
                  +l+G  g GKS+++++l  ++++        d+dv++ t  +s +
  EPX73649.1 607 IALVGESGGGKSTIMRILLRFFDVndgsitidDQDVRDVT-LSSLR 651
                 68****************9999998877777433333333.33333 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   1.8e-05     0.024      25      68 ..     606     645 ..     595     701 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 1.8e-05
      AAA_15  25 ltvliGkNnsGKSsilealdlFlnnkekknkkvikiekedleif 68 
                 +  l+G+ + GKS+i+++l  F++ +    +  i+i+++d+++ 
  EPX73649.1 606 VIALVGESGGGKSTIMRILLRFFDVN----DGSITIDDQDVRDV 645
                 789*********************88....88899999988776 PP

>> DUF4079  Protein of unknown function (DUF4079)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.1   0.00036      0.46      17      95 ..      18      97 ..       9     115 .. 0.80
   2 ?    1.6   0.0      0.22   2.8e+02       9      36 ..     405     433 ..     401     516 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00036
     DUF4079 17 lgavaylG.wqtrqrrlqskaerkekipkkvrdeHvklgslllllvvlgaigglvllylrrg.klfpssHlyaGlavvvLl 95
                l+  ++lG w +++ + q++ +++ + ++++++e  k+ s+ +l v+l +++ +++l++ +     +++H  + + +v+ l
  EPX73649.1 18 LYG-GFLGlWTLKALKQQRNGSEDLSRKSRFGKEPLKIVSWWILAVALTYVIDIANLVVYALrTPNWWPHKASVVCLVLSL 97
                333.779999999999999999999999***************************99966652577889976655555444 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.22
     DUF4079   9 mvllvfpllgav.aylGwqtrqrrlqska 36 
                 ++++ f++ +++  +++w+t +rr + ++
  EPX73649.1 405 VLVMTFCYCYVTvKITSWRTEARRKMVNS 433
                 44555555555416677*******99883 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0     4e-05     0.051       3      48 ..     605     649 ..     604     749 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 4e-05
      AAA_24   3 lkiliyGpsgiGKTtlakelgpkplfidtekGlksldadkfpdie..s 48 
                 + i+++G+sg GK+t+++ l     f+d+++G+  +d+ ++ d++  s
  EPX73649.1 605 KVIALVGESGGGKSTIMRIL---LRFFDVNDGSITIDDQDVRDVTlsS 649
                 689*****************...99**************999987662 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   7.7e-05     0.099      97     131 ..     601     636 ..     577     652 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 7.7e-05
                  CTT.SEEEEECSTTSSHHHHHHHHCTT-----S--- CS
  RsgA_GTPase  97 lkd.ktsvlvGqSGvGKStLinallpelelktgevs 131
                   +  k+++lvG+SG GKSt++  ll   +++ g++ 
   EPX73649.1 601 AEPgKVIALVGESGGGKSTIMRILLRFFDVNDGSIT 636
                  454599***************999876666655555 PP

>> SbcCD_C  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.2    0.0011       1.5      21      83 ..     703     752 ..     692     759 .. 0.70

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.0011
     SbcCD_C  21 gkekelsrssgtlSGGekqflaylalaaalaalyssaegrepalrlvfLDEAFsklDeesiat 83 
                 g  +++ ++  +lSGGekq +       a+a ++ +      ++ +++LDEA s lD ++ + 
  EPX73649.1 703 GYHSRVGERGLKLSGGEKQRM-------AVARAILK------NPTIILLDEATSALDTNTERH 752
                 555666667777888888543.......23333333......4889***********987665 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00012      0.16      17      56 ..     605     644 ..     595     646 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00012
  Zeta_toxin  17 klillgGqpGAGKselaellkdelerqgnvvrldpDdlRe 56 
                 k+i l+G +G GKs++++ l + ++ +++ +++d  d+R 
  EPX73649.1 605 KVIALVGESGGGKSTIMRILLRFFDVNDGSITIDDQDVRD 644
                 7899*******************************99996 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   0.00019      0.24      22      39 ..     604     621 ..     594     625 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00019
      AAA_29  22 kgatlltGpsGsGKSTll 39 
                   ++ l+G+sG GKST++
  EPX73649.1 604 GKVIALVGESGGGKSTIM 621
                 34899***********97 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   0.00069      0.88       2      97 ..     608     765 ..     607     784 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00069
                 EEESSTTSSHHHHHHHHHHHHTHE..........EEEEETTTCSSS..................................................... CS
         AAA   2 llyGppGtGKTllakavakelgve..........fleisgsellsk..................................................... 37 
                  l+G  G GK+++++ + + ++v+          +  + +s+l+s+                                                     
  EPX73649.1 608 ALVGESGGGKSTIMRILLRFFDVNdgsitiddqdVRDVTLSSLRSSigvvpqdsilfndtvmynikyakpsasneevyeaakaaqihdrilefpdgyhs 706
                 588999999999999999998544444444444477777777776688888888888888888888888888889999999999999999999999999 PP

                 ......STTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTT CS
         AAA  38 ......yvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvk 97 
                       +   + +k r+ +++a  k+ p+i+++DE+ +   ++       e+ +++ L +   g +
  EPX73649.1 707 rvgergLKLSGGEKQRMAVARAILKN-PTIILLDEATSALDTN------TERHIQASLNRLAAGRT 765
                 77777655566677777777776666.9**********99999......66666666666655554 PP

>> Comm  Commissureless
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.96   1.2e+03      14      76 ..     156     216 ..     145     229 .. 0.63
   2 ?   11.3   0.2   0.00027      0.34      14      53 ..     399     436 ..     387     466 .. 0.70

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.96
        Comm  14 ivltLlilslvFclcsCflyrkfrtWkkkktardakstranssdtlveiereelpeyeaeslP 76 
                 i +   +  ++ c+++  +y  +r+ + ++ ++d ++  +   ++ ++++ e +   +++ lP
  EPX73649.1 156 ILMADHLARVLLCIFAFAIYVTYRRKRPSRDTMDYEERTMF--ESGTQLDPEAPEGQSSQALP 216
                 55555566788999999999999998855544433333332..34444555555555555555 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 0.00027
        Comm  14 ivltLlilslvFclcsCflyrkfrtWkkkktardakstra 53 
                 + ++L++l + Fc   C+++ k  +W+   + +  +s r 
  EPX73649.1 399 VYFSLVVLVMTFC--YCYVTVKITSWRTEARRKMVNSWRD 436
                 5678999988886..58**********6655444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (827 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       942  (0.0525406); expected 358.6 (0.02)
Passed bias filter:                      596  (0.0332422); expected 358.6 (0.02)
Passed Vit filter:                        71  (0.00396006); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.86u 0.31s 00:00:01.17 Elapsed: 00:00:00.50
# Mc/sec: 4926.63
//
Query:       EPX73650.1  [L=4732]
Description: midasin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.9e-124  410.2   0.0    4.7e-21   75.2   0.0   10.4 10  AAA_5            AAA domain (dynein-related subfamily)
    4.7e-43  145.7   7.1    2.6e-14   53.3   0.3    4.3  3  AAA_lid_7        Midasin AAA lid domain
    2.5e-32  111.5   0.0    1.9e-08   34.2   0.0    7.6  7  AAA_3            ATPase family associated with various cellul
    1.2e-30  106.7   0.5    2.8e-05   24.6   0.0    8.1  7  AAA              ATPase family associated with various cellul
    2.3e-28   98.3   0.8    1.1e-27   96.2   0.0    2.7  1  AAA_lid_5        Midasin AAA lid domain
    9.5e-26   90.4   3.4    2.2e-05   24.0   0.7    6.8  6  AAA_7            P-loop containing dynein motor region
    1.8e-24   86.1   0.0    0.00027   21.0   0.0    7.4  7  Dynein_heavy     Dynein heavy chain region D6 P-loop domain
    6.7e-20   71.3   2.9      0.001   18.1   0.1    9.9  9  AAA_6            Hydrolytic ATP binding site of dynein motor 
      2e-19   70.6   5.0      0.011   16.1   0.0    8.3  6  AAA_16           AAA ATPase domain
    1.1e-17   64.8   0.4      0.008   16.7   0.0    8.0  6  AAA_18           AAA domain
    7.9e-16   58.6   6.6     0.0055   17.0   0.2    8.3  6  AAA_22           AAA domain
    3.6e-15   56.1   1.6       0.39   10.7   0.0    6.8  6  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
    6.2e-15   55.4   0.0     0.0012   18.9   0.0    7.4  5  AAA_14           AAA domain
    9.6e-14   51.4   0.0      0.072   12.8   0.1    6.1  5  Sigma54_activat  Sigma-54 interaction domain
    7.3e-13   48.8   0.5     0.0023   18.1   0.0    5.9  5  Sigma54_activ_2  Sigma-54 interaction domain
    1.4e-12   47.2   0.8       0.02   13.9   0.1    6.2  6  T2SSE            Type II/IV secretion system protein
    4.4e-12   46.3   0.1       0.59   10.3   0.0    6.8  6  AAA_33           AAA domain
    2.2e-11   44.0  11.1       0.18   11.7   0.0    8.0  7  Rad17            Rad17 P-loop domain
      9e-11   41.4   0.1          1    8.6   0.0    6.7  6  Zeta_toxin       Zeta toxin
      1e-10   41.9   2.5       0.45   10.9   0.0    7.4  7  RNA_helicase     RNA helicase
    1.4e-10   41.1   2.6      0.034   13.9   0.0    6.6  7  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
      1e-09   38.9   3.2          2    8.7   0.2    6.7  5  AAA_19           AAA domain
    1.2e-09   38.1   4.0        0.1   12.1   0.0    6.0  6  AAA_25           AAA domain
    7.2e-09   36.3  21.2     0.0039   17.7   0.0    7.7  6  ABC_tran         ABC transporter
    1.2e-08   34.8   1.2       0.25   11.0   0.3    5.4  5  SRP54            SRP54-type protein, GTPase domain
    2.7e-08   33.5   4.3        1.9    7.8   0.0    8.7  9  Mg_chelatase     Magnesium chelatase, subunit ChlI
    3.7e-08   33.5   5.5        1.3    8.9   0.0    5.6  5  NACHT            NACHT domain
    6.8e-08   32.4   0.0        1.7    8.3   0.0    5.9  6  IstB_IS21        IstB-like ATP binding protein
      7e-08   32.5   3.7       0.95    9.3   0.0    6.1  5  RsgA_GTPase      RsgA GTPase
    3.1e-07   30.0   0.1        4.9    7.0   0.1    6.2  6  AAA_29           P-loop containing region of AAA domain
    5.4e-07   29.5   3.2        2.2    7.9   0.0    6.6  6  AAA_24           AAA domain
    1.4e-06   27.6   0.1        1.9    7.5   0.0    4.5  4  DUF815           Protein of unknown function (DUF815)
    2.9e-06   27.1   3.4      0.085   12.6   0.0    5.4  5  PduV-EutP        Ethanolamine utilisation - propanediol utili
    4.7e-06   26.7   0.0       0.73    9.9   0.0    5.7  4  CbiA             CobQ/CobB/MinD/ParA nucleotide binding domai
    6.3e-06   26.3   0.4          2    8.4   0.0    5.7  5  ResIII           Type III restriction enzyme, res subunit
    3.4e-05   23.3   0.2        8.3    5.8   0.0    5.5  5  TniB             Bacterial TniB protein
    3.8e-05   24.0  13.6       0.19   12.0   0.0    6.9  6  AAA_28           AAA domain
    0.00019   20.9   1.2        2.5    7.4   0.1    6.2  6  AAA_8            P-loop containing dynein motor region D4
    0.00026   21.0   0.5         10    6.2   0.0    5.1  4  MMR_HSR1         50S ribosome-binding GTPase
    0.00031   20.7   5.1         16    5.4   0.2    5.1  4  NTPase_1         NTPase
    0.00046   20.5   1.1     0.0014   18.9   1.1    1.9  1  VWA              von Willebrand factor type A domain
      0.002   18.5   6.3         12    6.3   0.0    5.3  4  AAA_17           AAA domain
     0.0025   17.1   0.6         11    5.1   0.0    4.6  5  TIP49            TIP49 P-loop domain
     0.0062   16.0   6.8       0.66    9.4   0.2    5.7  6  SRPRB            Signal recognition particle receptor beta su
     0.0079   16.8   0.1      0.033   14.8   0.1    2.1  1  VWA_2            von Willebrand factor type A domain
  ------ inclusion threshold ------
      0.011   15.9   4.9         27    5.0   0.0    5.6  5  Roc              Ras of Complex, Roc, domain of DAPkinase
      0.016   15.3   0.2        3.1    7.8   0.0    3.3  2  tRNA_lig_kinase  tRNA ligase kinase domain
      0.025   14.4   6.8        3.1    7.5   0.0    5.4  4  ATP_bind_1       Conserved hypothetical ATP binding protein
      0.038   13.7   0.1         11    5.7   0.0    4.0  4  Viral_helicase1  Viral (Superfamily 1) RNA helicase
      0.053   13.4   7.3         19    5.1   0.0    5.6  4  dNK              Deoxynucleoside kinase
      0.067   13.1   0.2        4.1    7.3   0.1    3.2  2  AAA_31           AAA domain
       0.11   11.9   0.3         34    3.7   0.0    4.1  4  ATPase           KaiC
       0.11   11.8   0.4         67    2.8   0.0    3.9  3  IPT              Isopentenyl transferase
       0.43   10.5   4.3         95    2.9   0.1    4.6  3  MobB             Molybdopterin guanine dinucleotide synthesis
        0.6   10.1   3.2         13    5.7   0.6    3.4  2  Mur_ligase_M     Mur ligase middle domain
        5.3    6.3   7.7        8.7    5.6   0.1    4.2  4  FtsK_SpoIIIE     FtsK/SpoIIIE family
        8.5    4.8  12.3        1.5    7.3   0.2    3.3  2  DUF853           Bacterial protein of unknown function (DUF85


Domain annotation for each model (and alignments):
>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.2   0.0   1.5e-23   4.7e-21       1     124 [.     154     273 ..     154     282 .. 0.96
   2 !   35.1   0.3   3.7e-11   1.2e-08       1      48 [.     469     516 ..     469     522 .. 0.93
   3 !   26.8   0.0   1.3e-08   4.1e-06      52     138 .]     625     711 ..     608     711 .. 0.83
   4 !   72.5   0.0   1.1e-22   3.4e-20       2     138 .]     897    1032 ..     896    1032 .. 0.94
   5 !   26.8   0.0   1.3e-08   4.1e-06       1      46 [.    1187    1232 ..    1187    1247 .. 0.90
   6 !   49.1   0.0   1.8e-15   5.6e-13      50     138 .]    1293    1380 ..    1277    1380 .. 0.83
   7 !   63.1   0.0   8.1e-20   2.5e-17       2     138 .]    1560    1698 ..    1559    1698 .. 0.95
   8 !   13.0   0.0   0.00024     0.074       2      50 ..    1870    1916 ..    1869    1931 .. 0.90
   9 !   32.6   0.0   2.1e-10   6.7e-08      42     133 ..    2001    2092 ..    1990    2096 .. 0.80
  10 ?   -1.2   0.0       5.8   1.8e+03      79     121 ..    2470    2510 ..    2465    2522 .. 0.83

  Alignments for each domain:
  == domain 1  score: 75.2 bits;  conditional E-value: 1.5e-23
                 EEEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--..........--------G-SEEEEESGGG--HHHHHHHHHHHHSSEEE..- CS
       AAA_5   1 dvlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreik.ngttslvdsplvraaregeilvlDEveraesevlnsLlslleerrlllee 98 
                 ++lL Gp G gK+ ++ ++aa+l+++++ + lt++t ++ l+g +    +g+ ++++++l++a+r+g+ l+l  +e+a+ evl++Ll+lle+r+l +++
  EPX73650.1 154 PLLLAGPEGMGKTYFITQIAALLGQRIVRIHLTDSTDPKMLIGTYTCPrPGEFEWQPGVLTQAVRHGKWLLLSNIEKAPAEVLSILLPLLEKRQLVVPS 252
                 589*******************************************989************************************************** PP

                 SSSEEE---......-EEEEEESS-- CS
       AAA_5  99 ggelvkaknddllerfrviatanpld 124
                 +ge ++a+n      f+v+at+ +++
  EPX73650.1 253 RGETIYAANS-----FQVFATSSTNS 273
                 ********97.....******98876 PP

  == domain 2  score: 35.1 bits;  conditional E-value: 3.7e-11
                 EEEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--. CS
       AAA_5   1 dvlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreik 48 
                 ++lLvG++GtgK++ ++ la +l+++v++++++++t+++d++g++++ 
  EPX73650.1 469 PLLLVGETGTGKTTTVQLLANLLGQKVTVINMSQQTESSDMLGGYKPI 516
                 58******************************************9875 PP

  == domain 3  score: 26.8 bits;  conditional E-value: 1.3e-08
                 .....--------G-SEEEEESGGG--HHHHHHHHHHHHSSE..EE..-SSSEEE---......-EEEEEESS--..-TT-TTHHHHTT- CS
       AAA_5  52 tslvdsplvraaregeilvlDEveraesevlnsLlslleerr..llleeggelvkaknddllerfrviatanpld.rslnelspalrsRf 138
                  s+v+++lv+a+r+g+ ++lDE++ a+ e+l+   +ll+  +  +ll ++g +  + +    ++fr+++ +np    ++ el  +lrsRf
  EPX73650.1 625 FSFVEGALVKAIRSGHWVLLDEINLASMETLEPIGQLLNSYEpgILLSDRGDVNPVIP---HPNFRLFGCMNPSTdVGKRELETSLRSRF 711
                 589***************************9999999987652234444444443333...234*********999*************9 PP

  == domain 4  score: 72.5 bits;  conditional E-value: 1.1e-22
                  EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--..........--------G-SEEEEESGGG--HHHHHHHHHHHHSSEEE.. CS
       AAA_5    2 vlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreik.ngttslvdsplvraaregeilvlDEveraesevlnsLlslleerrllle 97  
                  +l++Gp+ +gK++++e++a  ++ +++ +++++ t  ++ +g++ ++ +g  ++++++lv+a ++g  +vlDE++ a+++vl++L++ll+++r l+ 
  EPX73650.1  897 ILIQGPTSSGKTSMIEYIAGKTGHKFVRINNHEHTDLQEYLGSYVTDdKGSLVFKEGILVEALKNGYWIVLDELNLAPTDVLEALNRLLDDNRELFI 993 
                  799*******************************************99*****************************************99887777 PP

                  -SSSEEE---......-EEEEEESS--...-TT-TTHHHHTT- CS
       AAA_5   98 eggelvkaknddllerfrviatanpld..rslnelspalrsRf 138 
                  + +e   ++ +d    f+++at np+    +++ ls a+r Rf
  EPX73650.1  994 PETESLVKPHPD----FMLFATQNPPGvyAGRKHLSRAFRNRF 1032
                  777777777766....************99************9 PP

  == domain 5  score: 26.8 bits;  conditional E-value: 1.3e-08
                  EEEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B- CS
       AAA_5    1 dvlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrre 46  
                  +vlLvG++G+gK+++ + la+ l +++++v+ ++dt+  d++g  +
  EPX73650.1 1187 PVLLVGDTGCGKTTVCQVLAECLSKQLHIVNAHQDTENGDIIGAQR 1232
                  59***************************************99766 PP

  == domain 6  score: 49.1 bits;  conditional E-value: 1.8e-15
                  .......--------G-SEEEEESGGG--HHHHHHHHHHHHSSEEE..-SSSEEE---......-EEEEEESS--..-TT-TTHHHHTT- CS
       AAA_5   50 gttslvdsplvraaregeilvlDEveraesevlnsLlslleerrllleeggelvkaknddllerfrviatanpld.rslnelspalrsRf 138 
                  +  +++d++lv a++ g+ ++lDE+  a+++vl++L+s+le  r l+   ++   +    + e f ++at+np   ++++elspalr Rf
  EPX73650.1 1293 SLFEWHDGALVSAMKGGDFFLLDEISLADDSVLERLNSVLEISRTLTLVEHNDAAVLT--ANEGFAFFATMNPGGdYGKKELSPALRNRF 1380
                  5579*************************************87776444333333333..2345*************************9 PP

  == domain 7  score: 63.1 bits;  conditional E-value: 8.1e-20
                  EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.............--------G-SEEEEESGGG--HHHHHHHHHHHHSS.E CS
       AAA_5    2 vlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreik....ngttslvdsplvraaregeilvlDEveraesevlnsLlslleer.r 93  
                  +lL G pG+gK++l+  la+  + ++  ++l+++t   dl+g+  +     +g+ +++d p+  a+r+g+ ++lDE++ a++ vl+ L+  l++r +
  EPX73650.1 1560 ILLEGSPGVGKTSLISALARECGYPLIRINLSDQTDLMDLFGSDAPVnggeGGQFAWRDAPFLSAMRHGHWVLLDELNLASQTVLEGLNACLDHRgE 1656
                  89****************************************98877799999****************************************9867 PP

                  EE..-SSSEEE---......-EEEEEESS--...-TT-TTHHHHTT- CS
       AAA_5   94 llleeggelvkaknddllerfrviatanpld..rslnelspalrsRf 138 
                   +++e++++ ka ++     frv+a+ np++  ++++ l ++++ Rf
  EPX73650.1 1657 AYIPELDRVFKAHPN-----FRVFAAQNPQSqgGGRKGLPKSFVNRF 1698
                  899999999999998.....***********9999999999999998 PP

  == domain 8  score: 13.0 bits;  conditional E-value: 0.00024
                  EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--... CS
       AAA_5    2 vlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikng 50  
                   +LvGp+ +gK++ ++ laa+ +  + ++++++ + + dl+g++e  + 
  EPX73650.1 1870 CILVGPSASGKTRTIRLLAAVCGVDLKEMAINSEIDTMDLLGEYE--QV 1916
                  59*****************************************99..44 PP

  == domain 9  score: 32.6 bits;  conditional E-value: 2.1e-10
                  H--B--..........--------G-SEEEEESGGG--HHHHHHHHHHHHSSEEE..-SSSEEE---.........-EEEEEESS--.-TT-TTHH CS
       AAA_5   42 kgrreik.ngttslvdsplvraaregeilvlDEveraesevlnsLlslleerrllleeggelvkaknddller...frviatanpldrslnelspa 133 
                  + + ++   g+ ++ d+ l ra+++g+ lvlD  + ++++vl++L+slle    l+ + +  ++  ++  +++   fr++ t np +++l++   a
  EPX73650.1 2001 IKEASVPaTGKFEWIDGYLLRAVENGHWLVLDNANLCSPAVLDRLNSLLESGGTLTVNERPTESGMPK-VIKPhpnFRLFLTVNPYYGELSR---A 2092
                  55555555899***************************************998877777777776665.4444588*********9955444...4 PP

  == domain 10  score: -1.2 bits;  conditional E-value: 5.8
                  HHHHHHHHHHHHSSEEE..-SSSEEE---......-EEEEEES CS
       AAA_5   79 sevlnsLlslleerrllleeggelvkaknddllerfrviatan 121 
                  s+ l+s +++lee  l l ++++++  ++  + ++f+++a++ 
  EPX73650.1 2470 SQDLDSYMQILEEGVLALKNSRQEQLPEA--FYSAFNCLAASD 2510
                  66688999**************9999888..678899999875 PP

>> AAA_lid_7  Midasin AAA lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.8   0.1   2.1e-15   6.6e-13       3     106 .]     294     405 ..     292     405 .. 0.96
   2 !   45.1   0.3   2.9e-14   9.1e-12       1     105 [.    1044    1137 ..    1044    1138 .. 0.98
   3 !   53.3   0.3   8.3e-17   2.6e-14       1     105 [.    1710    1810 ..    1710    1811 .. 0.97

  Alignments for each domain:
  == domain 1  score: 48.8 bits;  conditional E-value: 2.1e-15
   AAA_lid_7   3 eeilqskfpllasvadklievyeelrseqsssrsfs..gspreislRDLlkWcrRlsalldrsg......flspsvreeifleavdvFaaslstqedrl 93 
                  ei+++ +p l+++ ++l +vy+++ ++ s++++++     r + lRD  k+++R++ l ++ +      ++s+++++ if+ea+dvF a +++++  +
  EPX73650.1 294 VEIVSTIYPELSTISRTLFSVYNDIYELFSNRTFLAvsRVYRRLCLRDFYKFMKRVAFLYRNFHvsvghtTISQELQDAIFKEAIDVFSAFIPNKQGVD 392
                 68******************************9998778899*****************99999*********************************** PP

   AAA_lid_7  94 rvaeviaehlgls 106
                 +v++ ia  l++s
  EPX73650.1 393 NVVRNIAIDLNIS 405
                 *******999986 PP

  == domain 2  score: 45.1 bits;  conditional E-value: 2.9e-14
   AAA_lid_7    1 eLeeilqskfpllasvadklievyeelrseqsssrsfsgspreislRDLlkWcrRlsalldrsgflspsvreeifleavdvFaaslstqedrlrvae 97  
                  eLe+il+ +++++ s+a+k+++v++el+ +++s+r f  ++   +lRDL++W+ R +              +++++ +++++a++ ++++d+l+v e
  EPX73650.1 1044 ELETILHMRCKIAPSYASKIVQVFRELSLRRQSTRIFEQKNSFATLRDLFRWAFRDAVG-----------YDQLAENGYMLLAERARDPNDKLAVQE 1129
                  8*******************************************************999...........89************************* PP

   AAA_lid_7   98 viaehlgl 105 
                  vi++++++
  EPX73650.1 1130 VIEKVMKV 1137
                  ****9987 PP

  == domain 3  score: 53.3 bits;  conditional E-value: 8.3e-17
   AAA_lid_7    1 eLeeilqskf.pllasvadklievyeelrseqsssrsfs..gspreislRDLlkWcrRlsalldrsgflspsvreeifleavdvFaaslstqedrlr 94  
                  ++ ei ++ + ++ +++  ++ie++ +l++ ++   sf+  gsp+e++lRD ++W+++ls+        +++++ ++ + +  v +++++t++dr+r
  EPX73650.1 1710 DMLEIASQNYrQVDENMRFHIIEFMFKLQEYVEVDASFGasGSPWEFNLRDAMRWLQLLSEA-------EKYTCVSPSEYLEVVVLHRMRTSNDRQR 1799
                  899*******99***********************99*999********************9.......6799************************ PP

   AAA_lid_7   95 vaeviaehlgl 105 
                  v+++++e++++
  EPX73650.1 1800 VIRLFEEVFDV 1810
                  *********97 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.0   2.8e-08   8.8e-06       2     110 ..     155     269 ..     154     275 .. 0.87
   2 ?    7.5   0.1     0.011       3.4       2      43 ..     470     511 ..     469     520 .. 0.92
   3 !   19.9   0.0   1.6e-06    0.0005       2     130 ..     897    1033 ..     896    1034 .. 0.83
   4 !    9.2   0.0    0.0032         1       2      45 ..    1188    1231 ..    1187    1245 .. 0.93
   5 ?    1.2   0.0         1   3.2e+02      65     129 ..    1311    1380 ..    1281    1382 .. 0.64
   6 !   34.2   0.0     6e-11   1.9e-08       2     130 ..    1560    1699 ..    1559    1700 .. 0.84
   7 ?    2.3   0.0      0.44   1.4e+02       4      60 ..    1872    1931 ..    1870    1976 .. 0.66

  Alignments for each domain:
  == domain 1  score: 25.6 bits;  conditional E-value: 2.8e-08
       AAA_3   2 vllegvPGlaktllvkalakaldlefkriqftpdllPsdilGtevfeekekefefkkGpvfanl.....lladeinrappktqsalleameerqvtv.. 93 
                 +ll g  G++kt ++ ++a  l+ ++ ri +t    P  ++Gt     +  efe ++G + + +     ll  +i++ap+ + s ll  +e rq+ v  
  EPX73650.1 155 LLLAGPEGMGKTYFITQIAALLGQRIVRIHLTDSTDPKMLIGTYTC-PRPGEFEWQPGVLTQAVrhgkwLLLSNIEKAPAEVLSILLPLLEKRQLVVps 252
                 5899999***********************************9766.56799******98765444444999**********************77622 PP

       AAA_3  94 egethklpepflvlatq 110
                 +get    + f v+at 
  EPX73650.1 253 RGETIYAANSFQVFATS 269
                 6788888999*****96 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.011
       AAA_3   2 vllegvPGlaktllvkalakaldlefkriqftpdllPsdilG 43 
                 +ll g  G++kt++v+ la+ l+ +++ i +      sd+lG
  EPX73650.1 470 LLLVGETGTGKTTTVQLLANLLGQKVTVINMSQQTESSDMLG 511
                 5889999*************************9999999998 PP

  == domain 3  score: 19.9 bits;  conditional E-value: 1.6e-06
       AAA_3    2 vllegvPGlaktllvkalakaldlefkriqftpdllPsdilGtevfeekekefefkkGpvfanl.....lladeinrappktqsalleameerqvtv 93  
                  +l++g    +kt +++ +a + + +f ri         + lG+ v ++ + ++ fk+G ++  l     ++ de+n ap+ +  al   +++++  +
  EPX73650.1  897 ILIQGPTSSGKTSMIEYIAGKTGHKFVRINNHEHTDLQEYLGSYVTDD-KGSLVFKEGILVEALkngywIVLDELNLAPTDVLEALNRLLDDNRELF 992 
                  689999999*********************9988888999**988765.67899****99987655555899*************999888877666 PP

       AAA_3   94 egethklpep...flvlatqnPie.qeGtyplpeaqldrfl 130 
                    et +l +p   f+++atqnP   + G  +l  a  +rfl
  EPX73650.1  993 IPETESLVKPhpdFMLFATQNPPGvYAGRKHLSRAFRNRFL 1033
                  66666665543449*******96526789999999999997 PP

  == domain 4  score: 9.2 bits;  conditional E-value: 0.0032
       AAA_3    2 vllegvPGlaktllvkalakaldlefkriqftpdllPsdilGte 45  
                  vll g  G +kt++ + la++l+ +++ +    d   +di+G++
  EPX73650.1 1188 VLLVGDTGCGKTTVCQVLAECLSKQLHIVNAHQDTENGDIIGAQ 1231
                  7899999***********************************86 PP

  == domain 5  score: 1.2 bits;  conditional E-value: 1
       AAA_3   65 llladeinrappktqsalleame.erqvtv..eget..hklpepflvlatqnPieqeGtyplpeaqldrf 129 
                  ++l dei  a   +   l  ++e  r++t+  ++++   + +e f  +at nP    G  +l  a  +rf
  EPX73650.1 1311 FFLLDEISLADDSVLERLNSVLEiSRTLTLveHNDAavLTANEGFAFFATMNPGGDYGKKELSPALRNRF 1380
                  56777777777766554444443123333311333311345789*********************99999 PP

  == domain 6  score: 34.2 bits;  conditional E-value: 6e-11
       AAA_3    2 vllegvPGlaktllvkalakaldlefkriqftpdllPsdilGte..vfeekekefefkkGpvfanl.....lladeinrappktq...salleamee 88  
                  +lleg PG++kt l++ala+  +  + ri +       d+ G++  v   +  +f  +  p ++ +     +l de+n a+  +     a l+   e
  EPX73650.1 1560 ILLEGSPGVGKTSLISALARECGYPLIRINLSDQTDLMDLFGSDapVNGGEGGQFAWRDAPFLSAMrhghwVLLDELNLASQTVLeglNACLDHRGE 1656
                  79*****************************9877778999987224555669********99765444449*******999886222567888899 PP

       AAA_3   89 rqvtvegethklpepflvlatqnPieqeGt.yplpeaqldrfl 130 
                    +   ++ +k + +f v+a+qnP  q G    lp++ ++rf 
  EPX73650.1 1657 AYIPELDRVFKAHPNFRVFAAQNPQSQGGGrKGLPKSFVNRFT 1699
                  99***********************99876157********97 PP

  == domain 7  score: 2.3 bits;  conditional E-value: 0.44
       AAA_3    4 legvPGlaktllvkalakaldlefkriqftpdllPsdilGt.evfeeke..kefefkkGp 60  
                  l g    +kt++++ la + ++++k + + +++   d+lG  e ++ ++  + f ++   
  EPX73650.1 1872 LVGPSASGKTRTIRLLAAVCGVDLKEMAINSEIDTMDLLGEyEQVDISRkiSAFLLQLSH 1931
                  55666789*******************************973222222222555555544 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   4.5e-05     0.014       1      35 [.     155     189 ..     155     213 .. 0.91
   2 !   18.6   0.0   6.1e-06    0.0019       1      37 [.     470     506 ..     470     583 .. 0.81
   3 !   13.1   0.0    0.0003     0.094       1      40 [.     897     938 ..     897    1032 .. 0.76
   4 !   14.1   0.0   0.00015     0.047       1      35 [.    1188    1222 ..    1188    1318 .. 0.87
   5 !   24.6   0.0   8.8e-08   2.8e-05       1      35 [.    1560    1594 ..    1560    1637 .. 0.93
   6 ?    6.6   0.0     0.032        10       2      35 ..    1871    1904 ..    1870    1952 .. 0.82
   7 ?    2.4   0.1      0.61   1.9e+02      35      74 ..    4631    4672 ..    4604    4694 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 4.5e-05
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCS CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsell 35 
                 +ll Gp G+GKT+++ ++a  lg+++++i +++ +
  EPX73650.1 155 LLLAGPEGMGKTYFITQIAALLGQRIVRIHLTDST 189
                 69***************************999877 PP

  == domain 2  score: 18.6 bits;  conditional E-value: 6.1e-06
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSS CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellsk 37 
                 +ll+G  GtGKT++++ +a+ lg+++  i++s+ +++
  EPX73650.1 470 LLLVGETGTGKTTTVQLLANLLGQKVTVINMSQQTES 506
                 69********************999988888887733 PP

  == domain 3  score: 13.1 bits;  conditional E-value: 0.0003
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCS..SSSTT CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsell..skyvg 40 
                 +l+ Gp   GKT++++ +a ++g +f++i+ +e +  ++y+g
  EPX73650.1 897 ILIQGPTSSGKTSMIEYIAGKTGHKFVRINNHEHTdlQEYLG 938
                 6899***************************99883334444 PP

  == domain 4  score: 14.1 bits;  conditional E-value: 0.00015
                  EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCS CS
         AAA    1 vllyGppGtGKTllakavakelgvefleisgsell 35  
                  vll+G  G+GKT++++ +a+ l+ ++  +++++ +
  EPX73650.1 1188 VLLVGDTGCGKTTVCQVLAECLSKQLHIVNAHQDT 1222
                  79********************9888888887766 PP

  == domain 5  score: 24.6 bits;  conditional E-value: 8.8e-08
                  EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCS CS
         AAA    1 vllyGppGtGKTllakavakelgvefleisgsell 35  
                  +ll G pG+GKT+l++a+a+e+g ++++i++s+ +
  EPX73650.1 1560 ILLEGSPGVGKTSLISALARECGYPLIRINLSDQT 1594
                  699****************************9876 PP

  == domain 6  score: 6.6 bits;  conditional E-value: 0.032
                  EEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCS CS
         AAA    2 llyGppGtGKTllakavakelgvefleisgsell 35  
                  +l+Gp   GKT +++ +a  +gv++ e+   + +
  EPX73650.1 1871 ILVGPSASGKTRTIRLLAAVCGVDLKEMAINSEI 1904
                  79********************998888776655 PP

  == domain 7  score: 2.4 bits;  conditional E-value: 0.61
                  S.SSSTTHHHHHHHHHHHHHHHTS.TSEEEEEETGGGHHHHH CS
         AAA   35 l.skyvgesekkirelfkeakeka.kpsilfiDEidalaksr 74  
                  + s+ + e  + ir ++++a+e++   + +++D++  + ks+
  EPX73650.1 4631 IiSDGICEDHDTIRRILRRAQEEKvMIVFIILDNVNDMKKSS 4672
                  3366888999************99666888899999987766 PP

>> AAA_lid_5  Midasin AAA lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.2   0.0   3.4e-30   1.1e-27       1     104 [.     725     828 ..     725     830 .. 0.98

  Alignments for each domain:
  == domain 1  score: 96.2 bits;  conditional E-value: 3.4e-30
   AAA_lid_5   1 DLellvknyLkevsltdqalvtdvvefYlelkklaerkeltdgagqkphfSlRtlsraLsyartilklaglrralyeGfsmsFltqLdsesrkkvekli 99 
                 DL  ++++y+ ++ + d+ +++d++e+Y  +k+l+ + +l+dgagqkph+++Rtlsr+L y+++i++++glrr+lyeGf+msFlt Ld++s++++ k i
  EPX73650.1 725 DLLSIISKYIGTLCIGDDHVIRDIAELYQIAKRLSIDGSLVDGAGQKPHYTIRTLSRTLCYVAEIVPIYGLRRSLYEGFCMSFLTLLDQNSENLLYKYI 823
                 999**********99999********************************************************************************* PP

   AAA_lid_5 100 rkill 104
                 ++++l
  EPX73650.1 824 ERYTL 828
                 *9976 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.0   0.00095       0.3      11      58 ..     130     177 ..     122     195 .. 0.78
   2 !   24.0   0.7   7.1e-08   2.2e-05      26      77 ..     460     508 ..     439     511 .. 0.85
   3 ?    6.1   0.0     0.022       6.9      26      58 ..     887     919 ..     872     948 .. 0.81
   4 !   22.7   0.0   1.9e-07   5.8e-05      12      63 ..    1164    1215 ..    1154    1223 .. 0.87
   5 !   14.3   0.0   6.8e-05     0.021      26      76 ..    1550    1597 ..    1534    1601 .. 0.85
   6 ?    5.0   0.0     0.048        15      28      52 ..    1862    1886 ..    1853    1906 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00095
       AAA_7  11 eilVptvdtvrysyllelllknkkpvllvGptGtGKtviikdllkkld 58 
                 ++lV+t     +   ++ +l +k+p+ll Gp+G GKt  i+++   l 
  EPX73650.1 130 TTLVETESVKENLSRVSPFLVRKQPLLLAGPEGMGKTYFITQIAALLG 177
                 5677887777777888889999******************99877666 PP

  == domain 2  score: 24.0 bits;  conditional E-value: 7.1e-08
       AAA_7  26 lelllknkkpvllvGptGtGKtviikdllkkldkekylsltinfsaqtsanq 77 
                 ++  ++ + p+llvG+tGtGKt++++ l + l     ++++in+s+qt++++
  EPX73650.1 460 ISVAVQTNEPLLLVGETGTGKTTTVQLLANLLG---QKVTVINMSQQTESSD 508
                 5678999******************99888888...6678899*****9987 PP

  == domain 3  score: 6.1 bits;  conditional E-value: 0.022
       AAA_7  26 lelllknkkpvllvGptGtGKtviikdllkkld 58 
                 ++ + ++  p+l+ Gpt +GKt++i+ +  k  
  EPX73650.1 887 TRACSTRMFPILIQGPTSSGKTSMIEYIAGKTG 919
                 566778899****************98766655 PP

  == domain 4  score: 22.7 bits;  conditional E-value: 1.9e-07
       AAA_7   12 ilVptvdtvrysyllelllknkkpvllvGptGtGKtviikdllkkldkekyl 63  
                   +V t   +r+  l+ ++l++k pvllvG+tG+GKt++++ l + l+k+ ++
  EPX73650.1 1164 NVVWTAPMIRLFSLVWHCLQAKEPVLLVGDTGCGKTTVCQVLAECLSKQLHI 1215
                  57999999********************************999998865544 PP

  == domain 5  score: 14.3 bits;  conditional E-value: 6.8e-05
       AAA_7   26 lelllknkkpvllvGptGtGKtviikdllkkldkekylsltinfsaqtsan 76  
                  +   l+ +kp+ll G+ G+GKt++i+ l +++    y  + in+s qt+ +
  EPX73650.1 1550 VVRALQVRKPILLEGSPGVGKTSLISALARECG---YPLIRINLSDQTDLM 1597
                  5567899***********************999...***********9866 PP

  == domain 6  score: 5.0 bits;  conditional E-value: 0.048
       AAA_7   28 lllknkkpvllvGptGtGKtviikd 52  
                  ++++++ p++lvGp+ +GKt +i+ 
  EPX73650.1 1862 TCINKNWPCILVGPSASGKTRTIRL 1886
                  78999***************99975 PP

>> Dynein_heavy  Dynein heavy chain region D6 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.1    0.0032         1      47     100 ..     212     275 ..     207     292 .. 0.74
   2 ?   -1.4   0.1       7.8   2.4e+03       3      41 ..     467     505 ..     465     509 .. 0.90
   3 !   18.0   0.0   7.5e-06    0.0023      28     110 ..     610     708 ..     575     721 .. 0.68
   4 !   10.5   0.0    0.0016      0.49      45      96 ..     952    1014 ..     924    1019 .. 0.84
   5 ?   -0.2   0.0       3.2   9.9e+02      47      81 ..    1301    1339 ..    1296    1368 .. 0.74
   6 !   15.1   0.0     6e-05     0.019      44     115 ..    1617    1705 ..    1556    1707 .. 0.69
   7 !   21.0   0.0   8.7e-07   0.00027      40      97 ..    2011    2085 ..    1986    2103 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0032
                   HHHHHHHHT-EEEEE-GGG-.CCCHHHHHHH................HHTT-EEEEEEES-TTS CS
  Dynein_heavy  47 alekaakegsWvlLqNchla.pswlkeLekileel.........eeklhssfRlwltsepspkf 100
                   +l++a+++g+W+lL N+  a ++ l+ L  +le+          +  + +sf+++ ts +++++
    EPX73650.1 212 VLTQAVRHGKWLLLSNIEKApAEVLSILLPLLEKRqlvvpsrgeTIYAANSFQVFATSSTNSTI 275
                   6899****************5566777777777555566666544444569******9999876 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 7.8
                   TS-EEEEE-TT--THHHHHHHHHHTT--EEEEETTSHHH CS
  Dynein_heavy   3 ttPvlfilspgadptesleklakklkklvksvslGqgqe 41 
                   + P+l++ ++g+  t+ ++ la+ l++ v+ + + q+ e
    EPX73650.1 467 NEPLLLVGETGTGKTTTVQLLANLLGQKVTVINMSQQTE 505
                   679********************999999******9976 PP

  == domain 3  score: 18.0 bits;  conditional E-value: 7.5e-06
                   T--EEEEETTSH..HHHHHHHHHHHHHHHT-EEEEE-GGG-CCCHHHHHHH.......................HHTT-EEEEEEES-TTS-HHHHH CS
  Dynein_heavy  28 kklvksvslGqg..qeeeaekalekaakegsWvlLqNchlapswlkeLeki...leel.............eeklhssfRlwltsepspkfPislLq 106
                   +++ k++  G++    + +e al ka+++g+WvlL ++ la   +++Le i   l+++                 h++fRl+  ++ps+++ ++ L+
    EPX73650.1 610 EQFSKMLEGGSKsfMFSFVEGALVKAIRSGHWVLLDEINLA--SMETLEPIgqlLNSYepgillsdrgdvnPVIPHPNFRLFGCMNPSTDVGKRELE 704
                   5565566666662223478999*******************..4888888855433336667777767766666788******99999977666665 PP

                   TSEE CS
  Dynein_heavy 107 ssik 110
                   +s++
    EPX73650.1 705 TSLR 708
                   5544 PP

  == domain 4  score: 10.5 bits;  conditional E-value: 0.0016
                    HHHHHHHHHHT-EEEEE-GGG-.CCCHHHHHHH.................HHTT-EEEEEEES CS
  Dynein_heavy   45 ekalekaakegsWvlLqNchla.pswlkeLekileel..........eeklhssfRlwltsep 96  
                    e +l +a k+g W++L +  la ++ l+ L+++l++             k h++f l+ t +p
    EPX73650.1  952 EGILVEALKNGYWIVLDELNLApTDVLEALNRLLDDNrelfipetesLVKPHPDFMLFATQNP 1014
                    567899****************778899*****88666778887766566799*****99877 PP

  == domain 5  score: -0.2 bits;  conditional E-value: 3.2
                    HHHHHHHHT-EEEEE-GGG-.CCCHHHHHHH........ CS
  Dynein_heavy   47 alekaakegsWvlLqNchla.pswlkeLekileel...e 81  
                    al +a+k g++ lL ++ la  s l++L+++le +   +
    EPX73650.1 1301 ALVSAMKGGDFFLLDEISLAdDSVLERLNSVLEISrtlT 1339
                    7889****************778899****988444441 PP

  == domain 6  score: 15.1 bits;  conditional E-value: 6e-05
                    HHHHHHHHHHHT-EEEEE-GGG-.CCCHHHHHHH.................HHTT-EEEEEEES-T......TS-HHHHHTSEEEEE-- CS
  Dynein_heavy   44 aekalekaakegsWvlLqNchla.pswlkeLekileel..........eeklhssfRlwltsepsp......kfPislLqssikvtnep 115 
                     ++   +a+++g+WvlL +  la +  l+ L+  l++             k+h++fR++   +p++       +P+s+ ++ + v +ep
    EPX73650.1 1617 RDAPFLSAMRHGHWVLLDELNLAsQTVLEGLNACLDHRgeayipeldrVFKAHPNFRVFAAQNPQSqgggrkGLPKSFVNRFTVVYVEP 1705
                    45556789***************445588999997755677788877756779*******99999877776348888777777776665 PP

  == domain 7  score: 21.0 bits;  conditional E-value: 8.7e-07
                    HHHHHHHHHHHHHHHT-EEEEE-GGG-.CCCHHHHHHH.......................HHTT-EEEEEEES- CS
  Dynein_heavy   40 qeeeaekalekaakegsWvlLqNchla.pswlkeLekileel................eeklhssfRlwltseps 97  
                    + e ++  l +a+++g+W++L N  l+ p  l++L+++le+                   k h++fRl+lt +p 
    EPX73650.1 2011 KFEWIDGYLLRAVENGHWLVLDNANLCsPAVLDRLNSLLESGgtltvnerptesgmpkVIKPHPNFRLFLTVNPY 2085
                    55567778899****************889999*****87557777887788878776556688*******9885 PP

>> AAA_6  Hydrolytic ATP binding site of dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0      0.12        38      37      77 ..     157     197 ..     134     239 .. 0.93
   2 !   18.1   0.1   3.2e-06     0.001      35      74 ..     470     509 ..     457     521 .. 0.85
   3 ?    3.4   0.0     0.096        30      82     171 ..     636     723 ..     617     734 .. 0.82
   4 !   12.8   0.0   0.00013     0.042       9     159 ..     870    1032 ..     867    1078 .. 0.71
   5 !    6.7   0.0    0.0097       3.1      11      69 ..    1164    1222 ..    1159    1229 .. 0.88
   6 ?    2.1   0.0      0.24        75     128     181 ..    1348    1400 ..    1321    1419 .. 0.78
   7 ?    5.8   0.0     0.018       5.7      24      72 ..    1549    1597 ..    1538    1601 .. 0.88
   8 ?    5.4   0.0     0.024       7.6      24      70 ..    1859    1905 ..    1837    1912 .. 0.73
   9 ?   -1.6   1.2       3.3   1.1e+03     206     305 ..    3308    3408 ..    3291    3421 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.12
       AAA_6  37 paGpagtGKtEtvkdLakalakqvvvfncsdqldykslgki 77 
                 +aGp g GKt  + ++a  l++ +v ++ +d+ d k+l  +
  EPX73650.1 157 LAGPEGMGKTYFITQIAALLGQRIVRIHLTDSTDPKMLIGT 197
                 68********************************9998655 PP

  == domain 2  score: 18.1 bits;  conditional E-value: 3.2e-06
       AAA_6  35 gapaGpagtGKtEtvkdLakalakqvvvfncsdqldyksl 74 
                   + G +gtGKt tv+ La+ l++ v+v+n s+q + + +
  EPX73650.1 470 LLLVGETGTGKTTTVQLLANLLGQKVTVINMSQQTESSDM 509
                 56789*****************************998877 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.096
       AAA_6  82 aqsGaWgCfdeFnrielevLSvvaqqiktiqqalkekkkkfvfegkeiklnksvgifitmnp.gyagrteLPdnLkalfRpvammvPdlel 171
                 ++sG W+ +de+n  ++e L  + q +++    +  + +    + + +  ++++++f  mnp +  g+ eL  +L++ f ++ +  Pd +l
  EPX73650.1 636 IRSGHWVLLDEINLASMETLEPIGQLLNSYEPGILLSDRG---DVNPVIPHPNFRLFGCMNPsTDVGKRELETSLRSRFTEIYVESPDRNL 723
                 6799999999999999999999999999999888776655...4456777999*********44579*********************986 PP

  == domain 4  score: 12.8 bits;  conditional E-value: 0.00013
       AAA_6    9 serLviTpltdrcyltltqAlklklgga.paGpagtGKtEtvkdLakalakqvvvfncsdqldyksl.gk.........if.kGl....aqsGaWgC 89  
                  +e+ ++Tp  ++  l +t+A+++++    ++Gp+  GKt  +  +a + ++ +v +n +++ d +   g          +f +G+     + G W+ 
  EPX73650.1  870 QEHYIVTPFVQKNLLNITRACSTRMFPIlIQGPTSSGKTSMIEYIAGKTGHKFVRINNHEHTDLQEYlGSyvtddkgslVFkEGIlveaLKNGYWIV 966 
                  67789******************99875389*****************************9998753122111122222231455222246788888 PP

       AAA_6   90 fdeFnrielevLSvvaqqiktiqqalkekkkkfvfe.gkeiklnksvgifitmnp..gyagrteLPdnLkalf 159 
                  +de+n   ++vL +  +        l ++++ f+ e ++ +k ++++ +f t np   yagr++L   ++  f
  EPX73650.1  967 LDELNLAPTDVLEALNRL-------LDDNRELFIPEtESLVKPHPDFMLFATQNPpgVYAGRKHLSRAFRNRF 1032
                  888888888887655443.......334444444431334566677777777777655777777766666555 PP

  == domain 5  score: 6.7 bits;  conditional E-value: 0.0097
       AAA_6   11 rLviTpltdrcyltltqAlklklggapaGpagtGKtEtvkdLakalakqvvvfncsdql 69  
                  ++v T    r +  + + l+ k    + G +g GKt  ++ La++l+kq+ ++n +++ 
  EPX73650.1 1164 NVVWTAPMIRLFSLVWHCLQAKEPVLLVGDTGCGKTTVCQVLAECLSKQLHIVNAHQDT 1222
                  56777777799999999999999999****************************98765 PP

  == domain 6  score: 2.1 bits;  conditional E-value: 0.24
       AAA_6  128 eiklnksvgifitmnp.gyagrteLPdnLkalfRpvammvPdlelIaeimLfseG 181 
                   ++ n+ +++f tmnp g  g++eL   L+  f ++   vP ++ I +i  + eG
  EPX73650.1 1348 VLTANEGFAFFATMNPgGDYGKKELSPALRNRFTEI--WVPPMTSINDILQIVEG 1400
                  456788899*******55789*********999775..67777777777666665 PP

  == domain 7  score: 5.8 bits;  conditional E-value: 0.018
       AAA_6   24 tltqAlklklggapaGpagtGKtEtvkdLakalakqvvvfncsdqldyk 72  
                   +++Al+++    ++G+ g GKt  +  La++ +  ++ +n sdq d  
  EPX73650.1 1549 KVVRALQVRKPILLEGSPGVGKTSLISALARECGYPLIRINLSDQTDLM 1597
                  5788999999999********************************9975 PP

  == domain 8  score: 5.4 bits;  conditional E-value: 0.024
       AAA_6   24 tltqAlklklggapaGpagtGKtEtvkdLakalakqvvvfncsdqld 70  
                  ++++ ++ +  + + Gp++ GKt t++ La   ++ +  + ++ ++d
  EPX73650.1 1859 SMITCINKNWPCILVGPSASGKTRTIRLLAAVCGVDLKEMAINSEID 1905
                  45667778888999****************99998777666666666 PP

  == domain 9  score: -1.6 bits;  conditional E-value: 3.3
       AAA_6  206 qdhydfglralksvlkaagelkreepees.eeelllralrdvnlpklvaeDvplfkglisdlFpgvelpe.sdyeeleeaieevlkekklqleekfv 300 
                  q+ y + l+ ++s ++   +++r++ e++  e +ll + +d+n+  l ++  +  ++l + l +  e+ +   + +++++++ ++  k ++++++ +
  EPX73650.1 3308 QQIYSY-LKLFESNITHFISVQRDDLEKKiKERILLMSWKDTNVYALKENARKSHMELYKTLHKYREVLRqPVTPHMSQKLHWEMLLKPINVQTETL 3403
                  566666.788888899999999997665447889999*************************99886554277889999999999888888888887 PP

       AAA_6  301 ekviq 305 
                  +k + 
  EPX73650.1 3404 KKEVT 3408
                  77665 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.0    0.0063         2      25      51 ..     153     179 ..     134     198 .. 0.74
   2 !   16.1   0.0   3.6e-05     0.011      21      58 ..     466     500 ..     454     664 .. 0.77
   3 ?    5.8   0.1     0.051        16      18      69 ..     888     936 ..     880     991 .. 0.72
   4 !   14.4   0.0   0.00011     0.036      25      63 ..    1186    1223 ..    1173    1341 .. 0.61
   5 !   11.0   0.0    0.0013      0.41      25      48 ..    1558    1581 ..    1545    1605 .. 0.81
   6 ?    6.7   0.0     0.028       8.7      27      48 ..    1870    1890 ..    1853    2052 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0063
      AAA_16  25 elvllsGesGvGKsslvrellralekd 51 
                 + +ll G+ G+GK+  +++++  l ++
  EPX73650.1 153 QPLLLAGPEGMGKTYFITQIAALLGQR 179
                 679******************655555 PP

  == domain 2  score: 16.1 bits;  conditional E-value: 3.6e-05
      AAA_16  21 sgrpelvllsGesGvGKsslvrellralekdggiflrg 58 
                 ++  e +ll+Ge G+GK++ v+ l++ l ++ + +++ 
  EPX73650.1 466 TN--EPLLLVGETGTGKTTTVQLLANLLGQK-VTVINM 500
                 23..679******************777666.665433 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.051
      AAA_16  18 rvrsgrpelvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipy 69 
                 r++s r   +l+ G+  +GK+s+++ ++    k+g  f+r ++++++   +y
  EPX73650.1 888 RACSTRMFPILIQGPTSSGKTSMIEYIAG---KTGHKFVRINNHEHTDLQEY 936
                 45555556789*************99984...44555788887777444444 PP

  == domain 4  score: 14.4 bits;  conditional E-value: 0.00011
      AAA_16   25 elvllsGesGvGKsslvrellralekdggiflrgkcdql 63  
                  e vll+G+ G+GK+++ + l++ l+k+  + ++++ d  
  EPX73650.1 1186 EPVLLVGDTGCGKTTVCQVLAECLSKQ-LHIVNAHQDTE 1223
                  679******************999999.55555554444 PP

  == domain 5  score: 11.0 bits;  conditional E-value: 0.0013
      AAA_16   25 elvllsGesGvGKsslvrellral 48  
                    +ll G +GvGK+sl+ +l+r+ 
  EPX73650.1 1558 KPILLEGSPGVGKTSLISALAREC 1581
                  5799****************9865 PP

  == domain 6  score: 6.7 bits;  conditional E-value: 0.028
      AAA_16   27 vllsGesGvGKsslvrellral 48  
                  ++l+G+s++GK++ +r l+  +
  EPX73650.1 1870 CILVGPSASGKTRTIRLLAA-V 1890
                  789*************9984.3 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0       5.3   1.7e+03       2      33 ..     156     185 ..     155     195 .. 0.84
   2 ?    7.0   0.1     0.026       8.1       2      25 ..     471     497 ..     470     534 .. 0.77
   3 ?    6.4   0.0     0.038        12       1      56 [.     897     954 ..     897    1015 .. 0.67
   4 !   14.8   0.0   9.8e-05     0.031       1      84 [.    1188    1289 ..    1188    1313 .. 0.65
   5 !   16.7   0.0   2.6e-05     0.008       1      37 [.    1560    1599 ..    1560    1651 .. 0.81
   6 ?    7.9   0.0     0.013       4.2       2      44 ..    1871    1911 ..    1870    2003 .. 0.73

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 5.3
      AAA_18   2 lltGtpGvGKttlakeLskrlgfgvnlrdvak 33 
                 ll+G+ G GKt +   ++ +l  g+++  ++ 
  EPX73650.1 156 LLAGPEGMGKTYFITQIAALL--GQRIVRIHL 185
                 699**************9999..777766655 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.026
      AAA_18   2 lltGtpGvGKttlakeLskrlgf...g 25 
                 ll G  G+GKtt  + L+++lg    +
  EPX73650.1 471 LLVGETGTGKTTTVQLLANLLGQkvtV 497
                 68899**************99443444 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.038
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf....gvnlrdvakenglllevdpealdeskrldedk 56 
                 Il+ G+  +GKt++ ++++ ++g       n+ ++  +++l  +v+++  + s++++e+ 
  EPX73650.1 897 ILIQGPTSSGKTSMIEYIAGKTGHkfvrINNHEHTDLQEYLGSYVTDD--KGSLVFKEGI 954
                 89****************888754568744444444444444444444..4444444444 PP

  == domain 4  score: 14.8 bits;  conditional E-value: 9.8e-05
      AAA_18    1 IlltGtpGvGKttlakeLskrlgf....gvnlrdvakenglllevdpealdeskrldedkldklldaleenss...............aleegknl. 77  
                  +ll G  G+GKtt+++ L++ l +     vn  +   ++++   + p   ++   ++   + +l+++++ + +               ++e++++l 
  EPX73650.1 1188 VLLVGDTGCGKTTVCQVLAECL-SkqlhIVNAHQDTENGDIIGAQRPL--RNRSLIKNTLHIQLSEKFNVSQDkypvedlitkfeslsHSEKADDLs 1281
                  789***************8876.1246555555555555666666666..55555555555555555555544555555555555555455555555 PP

      AAA_18   78 .vidghla 84  
                   vi+ h+ 
  EPX73650.1 1282 vVIEKHIK 1289
                  56666665 PP

  == domain 5  score: 16.7 bits;  conditional E-value: 2.6e-05
      AAA_18    1 IlltGtpGvGKttlakeLskrlgf...gvnlrdvakengl 37  
                  Ill G pGvGKt+l  +L++++g+    +nl+d     +l
  EPX73650.1 1560 ILLEGSPGVGKTSLISALARECGYpliRINLSDQTDLMDL 1599
                  89*******************9988886666665444444 PP

  == domain 6  score: 7.9 bits;  conditional E-value: 0.013
      AAA_18    2 lltGtpGvGKttlakeLskrlgfgvnlrdvakenglllevdpe 44  
                  +l G++++GKt   + L+  +  gv l+++a ++++ +++   
  EPX73650.1 1871 ILVGPSASGKTRTIRLLAAVC--GVDLKEMAINSEIDTMDLLG 1911
                  799****************99..77777777777766655444 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.0    0.0044       1.4       5      56 ..     152     194 ..     150     207 .. 0.84
   2 !   17.0   0.2   1.7e-05    0.0055       7      56 ..     469     509 ..     464     672 .. 0.85
   3 ?    0.6   0.0         2   6.3e+02       8      58 ..     897     938 ..     896     993 .. 0.69
   4 !   12.7   0.0   0.00037      0.12       8      42 ..    1188    1239 ..    1183    1341 .. 0.61
   5 !    8.7   0.0    0.0061       1.9       5      57 ..    1557    1600 ..    1552    1602 .. 0.89
   6 ?    3.4   0.0      0.28        87       8      26 ..    1870    1888 ..    1867    1928 .. 0.93

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.0044
      AAA_22   5 agilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdl 56 
                 ++ l++ G+ G+GKT+ + +++  l         + ++v++ l+ st++k l
  EPX73650.1 152 KQPLLLAGPEGMGKTYFITQIAALL---------GQRIVRIHLTDSTDPKML 194
                 67799********************.........788888888888877755 PP

  == domain 2  score: 17.0 bits;  conditional E-value: 1.7e-05
      AAA_22   7 ilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdl 56 
                  l+++Ge+GtGKTt+++ l++ l         + +v  ++++++t+s+d+
  EPX73650.1 469 PLLLVGETGTGKTTTVQLLANLL---------GQKVTVINMSQQTESSDM 509
                 689********************.........677777777777766555 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 2
      AAA_22   8 lvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllr 58 
                 +++ G++ +GKT  ++ ++ +          + ++v+++  + t++++ l 
  EPX73650.1 897 ILIQGPTSSGKTSMIEYIAGKT---------GHKFVRINNHEHTDLQEYLG 938
                 688999999***9999999988.........78888888777776655544 PP

  == domain 4  score: 12.7 bits;  conditional E-value: 0.00037
      AAA_22    8 lvvtGesGtGKTtllrrlleqldeeakaee.................erpev 42  
                  ++++G +G+GKTt+++ l+e l ++ ++ +                 +++++
  EPX73650.1 1188 VLLVGDTGCGKTTVCQVLAECLSKQLHIVNahqdtengdiigaqrplRNRSL 1239
                  789************9999887554444445445655555555555544443 PP

  == domain 5  score: 8.7 bits;  conditional E-value: 0.0061
      AAA_22    5 agilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdll 57  
                  ++ +++ G +G+GKT l+  l+++          + ++++++l+ +t++ dl+
  EPX73650.1 1557 RKPILLEGSPGVGKTSLISALAREC---------GYPLIRINLSDQTDLMDLF 1600
                  567999*****************98.........9999999999999988886 PP

  == domain 6  score: 3.4 bits;  conditional E-value: 0.28
      AAA_22    8 lvvtGesGtGKTtllrrll 26  
                  ++++G+s +GKT+++r l+
  EPX73650.1 1870 CILVGPSASGKTRTIRLLA 1888
                  589************9986 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0    0.0058       1.8       6      46 ..     134     179 ..     130     184 .. 0.76
   2 !   10.3   0.2    0.0017      0.53      18      47 ..     464     496 ..     449     500 .. 0.75
   3 ?    4.4   0.0      0.11        35      21      49 ..     894     926 ..     876     940 .. 0.73
   4 !   10.7   0.0    0.0012      0.39      19      46 ..    1185    1212 ..    1169    1219 .. 0.79
   5 !   10.6   0.0    0.0014      0.43       7      45 ..    1543    1583 ..    1538    1589 .. 0.75
   6 ?    2.2   0.0      0.53   1.7e+02      21      60 ..    1867    1914 ..    1843    1946 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0058
                 HHHHHHHHHHHCH.....TEEEEEEESTTSSHHHHHHHHHHHTT-- CS
        TsaE   6 etealgkklakal.....gdvilLeGdLGaGKTtlvrglakalgve 46 
                 ete++ ++l ++      ++ +lL G+ G+GKT ++ ++a+ lg +
  EPX73650.1 134 ETESVKENLSRVSpflvrKQPLLLAGPEGMGKTYFITQIAALLGQR 179
                 566666677664455554556*******************999865 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.0017
                 H..TEEEEEEESTTSSHHHHHHHHHHHTT--.- CS
        TsaE  18 l..gdvilLeGdLGaGKTtlvrglakalgve.e 47 
                 +  ++ +lL G+ G+GKTt v+ la+ lg + +
  EPX73650.1 464 VqtNEPLLLVGETGTGKTTTVQLLANLLGQKvT 496
                 2225569******************99987644 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.11
                 E..EEEEESTTSSHHHHHHHHHHHTT--..--- CS
        TsaE  21 v..ilLeGdLGaGKTtlvrglakalgve..evk 49 
                 +  il++G+  +GKT ++  +a + g++  +++
  EPX73650.1 894 MfpILIQGPTSSGKTSMIEYIAGKTGHKfvRIN 926
                 25699*******************999866666 PP

  == domain 4  score: 10.7 bits;  conditional E-value: 0.0012
                  TEEEEEEESTTSSHHHHHHHHHHHTT-- CS
        TsaE   19 gdvilLeGdLGaGKTtlvrglakalgve 46  
                  ++ +lL Gd G+GKTt ++ la+ l  +
  EPX73650.1 1185 KEPVLLVGDTGCGKTTVCQVLAECLSKQ 1212
                  4569******************998655 PP

  == domain 5  score: 10.6 bits;  conditional E-value: 0.0014
                  HHHHHHHHHHCH..TEEEEEEESTTSSHHHHHHHHHHHTT- CS
        TsaE    7 tealgkklakal..gdvilLeGdLGaGKTtlvrglakalgv 45  
                  t+  ++k+ +al  ++ ilLeG  G+GKT l+ +la+++g+
  EPX73650.1 1543 TKVNAAKVVRALqvRKPILLEGSPGVGKTSLISALARECGY 1583
                  44445555555555667********************9987 PP

  == domain 6  score: 2.2 bits;  conditional E-value: 0.53
                  E..EEEEESTTSSHHHHHHHHHHHTT--....----..TTTTSEEEEE CS
        TsaE   21 v..ilLeGdLGaGKTtlvrglakalgve....evkS..PTFtlveeYe 60  
                      +L G+  +GKT  +r la+ +gv+    +++S   T  l+ eYe
  EPX73650.1 1867 NwpCILVGPSASGKTRTIRLLAAVCGVDlkemAINSeiDTMDLLGEYE 1914
                  145899*****************9999766666777333666666665 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   0.0    0.0062       1.9       2      44 ..     152     191 ..     151     225 .. 0.88
   2 ?    4.7   0.0     0.089        28       2      43 ..     467     505 ..     466     537 .. 0.79
   3 !   18.9   0.0   3.8e-06    0.0012       4     101 ..     896     999 ..     894    1003 .. 0.72
   4 ?    5.2   0.0     0.066        21       3      41 ..    1186    1221 ..    1184    1251 .. 0.74
   5 ?    7.1   0.0     0.017       5.3       2      47 ..    1557    1599 ..    1556    1666 .. 0.63

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0062
      AAA_14   2 rkilvitGaRrvGKTtllkqlikellvkkesilyinldderdk 44 
                 +++l++ G+  +GKT+++ q++  l    ++i+ i l d +d 
  EPX73650.1 152 KQPLLLAGPEGMGKTYFITQIAALLG---QRIVRIHLTDSTDP 191
                 57899****************97766...99**9999998774 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.089
      AAA_14   2 rkilvitGaRrvGKTtllkqlikellvkkesilyinldderd 43 
                 +++l+++G   +GKTt ++ l+ +ll   +++  in+ ++++
  EPX73650.1 467 NEPLLLVGETGTGKTTTVQLLA-NLL--GQKVTVINMSQQTE 505
                 678999***********98777.555..47777777777655 PP

  == domain 3  score: 18.9 bits;  conditional E-value: 3.8e-06
      AAA_14   4 ilvitGaRrvGKTtllkqlikellvkkesilyinldderd.......kkladpe.......kllelileklke..ekktylflDEiqevpe.wekalks 85 
                 +++i+G+  +GKT +++ ++ +      +++ in  +++d       +              + e il    e  ++ ++++lDE   +p+ + +al++
  EPX73650.1 896 PILIQGPTSSGKTSMIEYIAGKTG---HKFVRINNHEHTDlqeylgsY-----VtddkgslVFKEGILV---EalKNGYWIVLDELNLAPTdVLEALNR 983
                 589****************99999...899999888777733333221.....0222122222233333...24568999********985599***** PP

      AAA_14  86 lvdegknldvivtGSn 101
                 l+d++++l +  t S+
  EPX73650.1 984 LLDDNRELFIPETESL 999
                 ****999888777775 PP

  == domain 4  score: 5.2 bits;  conditional E-value: 0.066
      AAA_14    3 kilvitGaRrvGKTtllkqlikellvkkesilyinldde 41  
                  ++++++G   +GKTt+++ l++ l    ++   +n  ++
  EPX73650.1 1186 EPVLLVGDTGCGKTTVCQVLAECLS---KQLHIVNAHQD 1221
                  689999***********99987666...55555555443 PP

  == domain 5  score: 7.1 bits;  conditional E-value: 0.017
      AAA_14    2 rkilvitGaRrvGKTtllkqlikellvkkesilyinldderdkkla 47  
                  rk+++++G   vGKT l+  l++e        + inl d++d +  
  EPX73650.1 1557 RKPILLEGSPGVGKTSLISALARECG---YPLIRINLSDQTDLMDL 1599
                  6899******************9998...99*******99995433 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.0     0.005       1.6       4     122 ..     134     248 ..     131     280 .. 0.77
   2 !   12.8   0.1   0.00023     0.072       9      45 ..     454     490 ..     448     509 .. 0.83
   3 ?    6.5   0.0     0.019       6.1      12     120 ..     883     988 ..     875    1001 .. 0.70
   4 !    8.4   0.0     0.005       1.6       9      45 ..    1172    1208 ..    1166    1227 .. 0.81
   5 ?    6.2   0.0     0.024       7.6      11      61 ..    1546    1593 ..    1537    1659 .. 0.79

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.005
                      -SHHHHHHHHHHHHHCTSSS-EEEECSTTSSHHHHHHHHHHHSTTTTS-EEEEETTTS.-TTCHHHHHHEBSSSSSTTTSS-BEHHHHHT..TT CS
  Sigma54_activat   4 esealkelleqikkvaktdlsvlitGesGtGKellaraiheaskrkekpfvavncaai.peelleseLFGhekGaFtGAekekkGlfeka..dg 94 
                      e+e++ke l++++ +   + ++l+ G  G GK+++ ++i +      +++v++  ++   +++l     G+      G  + + G + +a  +g
       EPX73650.1 134 ETESVKENLSRVSPFLVRKQPLLLAGPEGMGKTYFITQIAALLG---QRIVRIHLTDStDPKML----IGTYTCPRPGEFEWQPGVLTQAvrHG 220
                      5678888999999999999****************999988765...66888888866244444....45555555555578899999986667 PP

                      SEEEEETGGGS-HHHHHHHHHHHHHSEE CS
  Sigma54_activat  95 GtlfLDeigelplelQekLlrvlqegev 122
                        l+L +i++ p+e+ + Ll +l+++++
       EPX73650.1 221 KWLLLSNIEKAPAEVLSILLPLLEKRQL 248
                      899999********99999999999986 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 0.00023
                      HHHHHHHHHHCTSSS-EEEECSTTSSHHHHHHHHHHH CS
  Sigma54_activat   9 kelleqikkvaktdlsvlitGesGtGKellaraihea 45 
                       +lle+i+ +++t+ ++l++Ge+GtGK++  +++ + 
       EPX73650.1 454 LSLLEKISVAVQTNEPLLLVGETGTGKTTTVQLLANL 490
                      568899**********************999988764 PP

  == domain 3  score: 6.5 bits;  conditional E-value: 0.019
                      HHHHHHHCTSS.S-EEEECSTTSSHHHHHHHHHHHSTTTTS-EEEEETTTS-TTCHHHHHHEBSSSSSTTTSS-BEHHHHHT..TTSEEEEETG CS
  Sigma54_activat  12 leqikkvaktd.lsvlitGesGtGKellaraiheaskrkekpfvavncaaipeelleseLFGhekGaFtGAekekkGlfeka..dgGtlfLDei 102
                      l +i+++ +t+  ++li+G + +GK+ + + i     ++ ++fv++n  + ++  l +e  G       G+   k+G + +a  +g  + LDe+
       EPX73650.1 883 LLNITRACSTRmFPILIQGPTSSGKTSMIEYIAG---KTGHKFVRINNHEHTD--L-QEYLGSYVTDDKGSLVFKEGILVEAlkNGYWIVLDEL 970
                      4445555555449*************99888865...5568899999776543..2.3445555556677777888876665433446888888 PP

                      GGS-HHHHHHHHHHHHHS CS
  Sigma54_activat 103 gelplelQekLlrvlqeg 120
                      +  p+++ e L r+l+++
       EPX73650.1 971 NLAPTDVLEALNRLLDDN 988
                      888888888888888765 PP

  == domain 4  score: 8.4 bits;  conditional E-value: 0.005
                       HHHHHHHHHHCTSSS-EEEECSTTSSHHHHHHHHHHH CS
  Sigma54_activat    9 kelleqikkvaktdlsvlitGesGtGKellaraihea 45  
                        +l++ + ++ + + +vl++G++G+GK+++ + + e 
       EPX73650.1 1172 IRLFSLVWHCLQAKEPVLLVGDTGCGKTTVCQVLAEC 1208
                       566677778889999***************9998774 PP

  == domain 5  score: 6.2 bits;  conditional E-value: 0.024
                       HHHHHHHHCTSSS-EEEECSTTSSHHHHHHHHHHHSTTTTS-EEEEETTTS CS
  Sigma54_activat   11 lleqikkvaktdlsvlitGesGtGKellaraiheaskrkekpfvavncaai 61  
                         +++ ++ + + ++l++G  G+GK+ l +a+ ++      p++++n ++ 
       EPX73650.1 1546 NAAKVVRALQVRKPILLEGSPGVGKTSLISALAREC---GYPLIRINLSDQ 1593
                       456677888999**************9988876554...478888887765 PP

>> Sigma54_activ_2  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0      0.16        51      19      95 ..     150     245 ..     134     276 .. 0.62
   2 !   18.1   0.0   7.2e-06    0.0023       9      64 ..     455     509 ..     448     528 .. 0.85
   3 ?    1.9   0.0      0.69   2.2e+02      18      77 ..     891     952 ..     881     959 .. 0.75
   4 !   16.1   0.0   2.9e-05    0.0091       5      57 ..    1169    1221 ..    1166    1239 .. 0.88
   5 ?   -1.3   0.0       6.8   2.1e+03      17      43 ..    1553    1579 ..    1544    1604 .. 0.79

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.16
                      T-SS-EEEEEETT--HHHHHHCC--TTS-EE--SSTT.HHHH-H..................HHHHHHT..TTSEEEEEE-TT--HHHHHHHHH CS
  Sigma54_activ_2  19 qsklpvfltGekGsgkelvArlLhknsgpwleifvve.rlaklp..................ldlleqa..kggtLylkdiadlskaeqkeLle 91 
                       +k p++l+G++G gk+++   ++   g+   i++++ ++++ p                    +l qa  +g  L+l +i++ +++ ++ Ll 
       EPX73650.1 150 VRKQPLLLAGPEGMGKTYFITQIAALLGQ--RIVRIHlTDSTDPkmligtytcprpgefewqPGVLTQAvrHGKWLLLSNIEKAPAEVLSILLP 241
                      6789*************987666665555..222221012222233455666666666555544445545577777777777777777777777 PP

                      HHHH CS
  Sigma54_activ_2  92 llak 95 
                      ll+k
       EPX73650.1 242 LLEK 245
                      7776 PP

  == domain 2  score: 18.1 bits;  conditional E-value: 7.2e-06
                      HHHHHHHHHHT-SS-EEEEEETT--HHHHHHCC--TTS-EE--SSTTHHHH-HHHH CS
  Sigma54_activ_2   9 elkerLeqaaqsklpvfltGekGsgkelvArlLhknsgpwleifvverlaklpldl 64 
                       l e++ +a+q + p++l+Ge G+gk++  +lL++  g+++ + ++ +  ++ +d+
       EPX73650.1 455 SLLEKISVAVQTNEPLLLVGETGTGKTTTVQLLANLLGQKVTVINMSQ-QTESSDM 509
                      6778999********************************999999944.4444555 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.69
                      HT-SS-EEEEEETT--HHHHHHCC--TTS-EE--SSTTH.HHH-HHHHHHHT...TTSEEEEEE CS
  Sigma54_activ_2  18 aqsklpvfltGekGsgkelvArlLhknsgpwleifvver.laklpldlleqa...kggtLylkd 77 
                      + +++p+++ G+  sgk+++ ++++ + g   + +++++  ++  ++ l +    + g L++k+
       EPX73650.1 891 STRMFPILIQGPTSSGKTSMIEYIAGKTGH--KFVRINNhEHTDLQEYLGSYvtdDKGSLVFKE 952
                      5789********************998887..44444430444677777774445677777765 PP

  == domain 4  score: 16.1 bits;  conditional E-value: 2.9e-05
                       HHHHHHHHHHHHHHT-SS-EEEEEETT--HHHHHHCC--TTS-EE--SSTTHH CS
  Sigma54_activ_2    5 aaiqelkerLeqaaqsklpvfltGekGsgkelvArlLhknsgpwleifvverl 57  
                       a++++l++ +    q+k pv+l+G+ G+gk++v ++L++  +++l+i++ +++
       EPX73650.1 1169 APMIRLFSLVWHCLQAKEPVLLVGDTGCGKTTVCQVLAECLSKQLHIVNAHQD 1221
                       67888888888999*****************************9999988665 PP

  == domain 5  score: -1.3 bits;  conditional E-value: 6.8
                       HHT-SS-EEEEEETT--HHHHHHCC-- CS
  Sigma54_activ_2   17 aaqsklpvfltGekGsgkelvArlLhk 43  
                       a q   p++l G +G gk++   +L+ 
       EPX73650.1 1553 ALQVRKPILLEGSPGVGKTSLISALAR 1579
                       568889************998777765 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.37   1.2e+02     108     160 ..     132     183 ..     108     190 .. 0.78
   2 !   13.9   0.1   6.4e-05      0.02      67     156 ..     398     494 ..     347     506 .. 0.65
   3 !   11.5   0.0   0.00036      0.11     104     149 ..     869     914 ..     853     935 .. 0.81
   4 ?    6.7   0.0     0.011       3.3     124     161 ..    1180    1216 ..    1150    1232 .. 0.84
   5 ?    3.3   0.0      0.11        36     113     152 ..    1542    1580 ..    1527    1590 .. 0.79
   6 ?    0.6   0.0      0.76   2.4e+02      98     147 ..    1837    1885 ..    1826    1916 .. 0.74

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.37
       T2SSE 108 lgaeealkekiaevlrkavrerglilvsGgTgsGKttllyallkeinksderi 160
                 l+ +e++ke++++v      +++ +l++G+ g GKt ++  + + + ++  ri
  EPX73650.1 132 LVETESVKENLSRVSPFL-VRKQPLLLAGPEGMGKTYFITQIAALLGQRIVRI 183
                 556666666666665555.55678999**********9998888887775555 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 6.4e-05
       T2SSE  67 plqdarlp.ekgvrlrvvllPvvag..ealvi.R....kksakeltlddlgaeealkekiaevlrkavrerglilvsGgTgsGKttllyallkeinks 156
                 + +d +++ ek++++   ++P++++   a+++ R    k s+++++ ++  a  + +  + e ++ av+++  +l+ G Tg+GKtt++  l + + ++
  EPX73650.1 398 IAIDLNISpEKAEHFFE-VIPSFHDseSAVTVgRsklpKVSSSAVSTSNPYAFTSSSLSLLEKISVAVQTNEPLLLVGETGTGKTTTVQLLANLLGQK 494
                 44444444444444433.334444432223332355544444555444444444445677788999*********************99888887766 PP

  == domain 3  score: 11.5 bits;  conditional E-value: 0.00036
       T2SSE 104 tlddlgaeealkekiaevlrkavrerglilvsGgTgsGKttllyal 149
                 + +++++++ +++++ ++ r+  ++   il+ G+T+sGKt ++  +
  EPX73650.1 869 DQEHYIVTPFVQKNLLNITRACSTRMFPILIQGPTSSGKTSMIEYI 914
                 5678999999999999999999888899************988554 PP

  == domain 4  score: 6.7 bits;  conditional E-value: 0.011
       T2SSE  124 kavrerglilvsGgTgsGKttllyallkeinksderiv 161 
                  + ++++  +l+ G Tg GKtt+  +l + + k+  +iv
  EPX73650.1 1180 HCLQAKEPVLLVGDTGCGKTTVCQVLAECLSKQ-LHIV 1216
                  556889999**************9999999888.6666 PP

  == domain 5  score: 3.3 bits;  conditional E-value: 0.11
       T2SSE  113 alkekiaevlrkavrerglilvsGgTgsGKttllyallke 152 
                  ++k + a+v+r+  + r+ il+ G  g GKt l+ al  e
  EPX73650.1 1542 TTKVNAAKVVRAL-QVRKPILLEGSPGVGKTSLISALARE 1580
                  4444556666665.*******************9998765 PP

  == domain 6  score: 0.6 bits;  conditional E-value: 0.76
       T2SSE   98 ksakeltlddlgaeealkekiaevlrkavrerglilvsGgTgsGKttlly 147 
                  + +++ +ld+    +++ + +++++   ++++   ++ G+  sGKt ++ 
  EPX73650.1 1837 SLTQNTSLDNTKLLQSQYDVLESMIT-CINKNWPCILVGPSASGKTRTIR 1885
                  55556666666666666666666654.55888899999*******98764 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.071        22       3      28 ..     156     183 ..     155     247 .. 0.87
   2 ?    7.8   0.0     0.011       3.3       3      73 ..     471     543 ..     470     616 .. 0.57
   3 ?    2.8   0.0      0.38   1.2e+02       3      32 ..     898     929 ..     897     989 .. 0.75
   4 ?    5.5   0.0     0.054        17       2      43 ..    1188    1233 ..    1188    1259 .. 0.70
   5 !   10.3   0.0    0.0019      0.59       2      29 ..    1560    1587 ..    1560    1643 .. 0.87
   6 ?    4.7   0.0     0.098        31       3      23 ..    1871    1891 ..    1841    1919 .. 0.91

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.071
      AAA_33   3 llvGlpGsGKstlaerllkklg..avll 28 
                 ll G+ G+GK+++++++++ lg   v++
  EPX73650.1 156 LLAGPEGMGKTYFITQIAALLGqrIVRI 183
                 789**************99888775544 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.011
      AAA_33   3 llvGlpGsGKstlaerllkklg....avllssdtlrrrlfg.tdqqsktdytrvldrlyqilnelarkalsagrnv 73 
                 llvG  G+GK+t ++ l++ lg    ++  s+ t+++ + g  ++ ++t  t  l+   +++  l++ + s ++n+
  EPX73650.1 471 LLVGETGTGKTTTVQLLANLLGqkvtVINMSQQTESSDMLGgYKPINIT--TLGLPLHEEFM-SLFETTFSVKKNM 543
                 79***************99999986555578888888776623333332..22333333333.4444444444443 PP

  == domain 3  score: 2.8 bits;  conditional E-value: 0.38
      AAA_33   3 llvGlpGsGKstlaerllkklg..avllssdt 32 
                 l+ G+  sGK+  +e ++ k+g  +v+++  +
  EPX73650.1 898 LIQGPTSSGKTSMIEYIAGKTGhkFVRINNHE 929
                 778*******************9999998765 PP

  == domain 4  score: 5.5 bits;  conditional E-value: 0.054
      AAA_33    2 vllvGlpGsGKstlaerllkklg....avllssdtlrrrlfgtdqq 43  
                  vllvG  G+GK+t+ + l++ l      v   +dt+   + g +++
  EPX73650.1 1188 VLLVGDTGCGKTTVCQVLAECLSkqlhIVNAHQDTENGDIIGAQRP 1233
                  789**********999886555444437777788877777765444 PP

  == domain 5  score: 10.3 bits;  conditional E-value: 0.0019
      AAA_33    2 vllvGlpGsGKstlaerllkklgavlls 29  
                  +ll G pG+GK+ l+  l+++ g+ l++
  EPX73650.1 1560 ILLEGSPGVGKTSLISALARECGYPLIR 1587
                  6899*******************76665 PP

  == domain 6  score: 4.7 bits;  conditional E-value: 0.098
      AAA_33    3 llvGlpGsGKstlaerllkkl 23  
                  +lvG+++sGK+  ++ l++  
  EPX73650.1 1871 ILVGPSASGKTRTIRLLAAVC 1891
                  79*********9999887654 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0      0.11        33      44      73 ..     151     180 ..     133     189 .. 0.79
   2 !   11.0   0.0   0.00097       0.3      43      74 ..     465     496 ..     455     538 .. 0.80
   3 ?    0.5   0.0       1.6   4.9e+02      48      79 ..     897     928 ..     881     955 .. 0.82
   4 !   11.7   0.0   0.00056      0.18      46      74 ..    1186    1214 ..    1179    1226 .. 0.82
   5 ?    7.3   0.0     0.013         4      14      74 ..    1531    1586 ..    1528    1595 .. 0.79
   6 ?    4.6   0.0     0.089        28      48      77 ..    1870    1899 ..    1847    1937 .. 0.81
   7 ?    2.3   0.0      0.43   1.3e+02     143     176 ..    2520    2553 ..    2475    2559 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.11
       Rad17  44 kkriLLisGPsGCgkstvvkvLskelgikl 73 
                 +k+ LL++GP G gk+  +  ++  lg ++
  EPX73650.1 151 RKQPLLLAGPEGMGKTYFITQIAALLGQRI 180
                 4689**************999999888765 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00097
       Rad17  43 rkkriLLisGPsGCgkstvvkvLskelgiklr 74 
                 + ++ LL+ G +G gk+t+v+ L+  lg k+ 
  EPX73650.1 465 QTNEPLLLVGETGTGKTTTVQLLANLLGQKVT 496
                 4556799*********************9985 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 1.6
       Rad17  48 LLisGPsGCgkstvvkvLskelgiklrewlnp 79 
                 +Li GP+  gk+ +++ ++ + g k+    n 
  EPX73650.1 897 ILIQGPTSSGKTSMIEYIAGKTGHKFVRINNH 928
                 69*****************9999998765554 PP

  == domain 4  score: 11.7 bits;  conditional E-value: 0.00056
       Rad17   46 riLLisGPsGCgkstvvkvLskelgiklr 74  
                  + +L+ G +GCgk+tv +vL+  l+ +l+
  EPX73650.1 1186 EPVLLVGDTGCGKTTVCQVLAECLSKQLH 1214
                  456889***************99988764 PP

  == domain 5  score: 7.3 bits;  conditional E-value: 0.013
       Rad17   14 kPekaeelavhkkkieevkewlkadvLesrkkriLLisGPsGCgkstvvkvLskelgiklr 74  
                   P++  +l+ h  k+++ k       L+ r  + +L+ G +G gk+  +  L++e g+ l+
  EPX73650.1 1531 NPDTSYNLSTHTTKVNAAKVV---RALQVR--KPILLEGSPGVGKTSLISALARECGYPLI 1586
                  588888999999998876643...344444..446789*******************9876 PP

  == domain 6  score: 4.6 bits;  conditional E-value: 0.089
       Rad17   48 LLisGPsGCgkstvvkvLskelgiklrewl 77  
                   ++ GPs  gk+ +++ L+   g++l+e  
  EPX73650.1 1870 CILVGPSASGKTRTIRLLAAVCGVDLKEMA 1899
                  4689*********************99964 PP

  == domain 7  score: 2.3 bits;  conditional E-value: 0.43
       Rad17  143 nkfyrdsdalrevirkylrssealplilviteie 176 
                  n+f+ +s+a+ + +  +l+++++++ + vit+++
  EPX73650.1 2520 NNFNVSSEAFTNYVHAALYTRGTVSPLSVITNLN 2553
                  89**********************8888999765 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.097        31      17      52 ..     153     186 ..     138     189 .. 0.85
   2 ?    4.5   0.1      0.06        19      19      45 ..     470     496 ..     455     503 .. 0.74
   3 ?    5.2   0.0     0.036        11      19     101 ..     897     968 ..     881     990 .. 0.71
   4 !    8.6   0.0    0.0033         1      18      52 ..    1187    1221 ..    1180    1223 .. 0.86
   5 !    7.9   0.0    0.0054       1.7      17      50 ..    1558    1589 ..    1544    1595 .. 0.84
   6 ?    1.0   0.0       0.7   2.2e+02      20      38 ..    1871    1889 ..    1865    1904 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.097
  Zeta_toxin  17 klillgGqpGAGKselaellkdelerqgnvvrldpD 52 
                   +ll+G  G GK++ ++ +++ l  ++++vr+  +
  EPX73650.1 153 QPLLLAGPEGMGKTYFITQIAALL--GQRIVRIHLT 186
                 4579*******************9..9999999865 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.06
  Zeta_toxin  19 illgGqpGAGKselaellkdelerqgn 45 
                 +ll+G +G GK+++ +ll++ l+++  
  EPX73650.1 470 LLLVGETGTGKTTTVQLLANLLGQKVT 496
                 689***************999854333 PP

  == domain 3  score: 5.2 bits;  conditional E-value: 0.036
  Zeta_toxin  19 illgGqpGAGKselaellkdelerqgnvvrldpDdlRelhPeyeeilkadpkkaseltqkd.aselvekllqeaiengyniive 101
                 il+ G + +GK++++e+++ ++  + ++vr++  +   l  ey +         s +t++  + ++ e +l ea++ngy i+++
  EPX73650.1 897 ILIQGPTSSGKTSMIEYIAGKT--GHKFVRINNHEHTDLQ-EYLG---------SYVTDDKgSLVFKEGILVEALKNGYWIVLD 968
                 68889****************9..9******986544443.4444.........444443303455667777777777777776 PP

  == domain 4  score: 8.6 bits;  conditional E-value: 0.0033
  Zeta_toxin   18 lillgGqpGAGKselaellkdelerqgnvvrldpD 52  
                   +ll+G +G+GK+++ + l++ l +q  +v   +D
  EPX73650.1 1187 PVLLVGDTGCGKTTVCQVLAECLSKQLHIVNAHQD 1221
                  489*******************9999999887776 PP

  == domain 5  score: 7.9 bits;  conditional E-value: 0.0054
  Zeta_toxin   17 klillgGqpGAGKselaellkdelerqgnvvrld 50  
                  k ill G+pG GK++l+++l++e   +   +r++
  EPX73650.1 1558 KPILLEGSPGVGKTSLISALAREC--GYPLIRIN 1589
                  5589*******************9..77777776 PP

  == domain 6  score: 1.0 bits;  conditional E-value: 0.7
  Zeta_toxin   20 llgGqpGAGKselaellkd 38  
                  +l+G +++GK+++++ll++
  EPX73650.1 1871 ILVGPSASGKTRTIRLLAA 1889
                  899************9986 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0     0.079        25       2      26 ..     156     180 ..     155     202 .. 0.82
   2 !    9.2   0.0    0.0048       1.5       2      48 ..     471     514 ..     470     520 .. 0.76
   3 ?    2.4   0.0      0.64     2e+02       1      26 [.     897     922 ..     897     944 .. 0.79
   4 !   10.9   0.0    0.0014      0.45       1      26 [.    1188    1213 ..    1188    1232 .. 0.83
   5 ?    5.1   0.0     0.093        29       1      22 [.    1560    1581 ..    1560    1595 .. 0.88
   6 ?   -0.9   0.0       6.7   2.1e+03       2      20 ..    1871    1889 ..    1870    1904 .. 0.84
   7 ?   -1.4   0.0       9.9   3.1e+03       4      65 ..    4480    4535 ..    4479    4555 .. 0.69

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.079
  RNA_helicase   2 wlyGpsgeGKStlakeLakallkkl 26 
                   +l Gp+g GK+++++++a+ l +++
    EPX73650.1 156 LLAGPEGMGKTYFITQIAALLGQRI 180
                   689*************998888777 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.0048
  RNA_helicase   2 wlyGpsgeGKStlakeLakallkklklkkkdsvysrnpeddfwdgYt 48 
                   +l+G++g+GK+t+++ La+ l +k+  ++   +  ++ ++d++ gY+
    EPX73650.1 471 LLVGETGTGKTTTVQLLANLLGQKVTVIN---MSQQTESSDMLGGYK 514
                   789****************9999884443...433556666666665 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.64
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkkl 26 
                   i+++Gp+  GK+++++++a +   k+
    EPX73650.1 897 ILIQGPTSSGKTSMIEYIAGKTGHKF 922
                   6899*************988777665 PP

  == domain 4  score: 10.9 bits;  conditional E-value: 0.0014
  RNA_helicase    1 iwlyGpsgeGKStlakeLakallkkl 26  
                    ++l+G++g+GK+t+++ La+ l+k+l
    EPX73650.1 1188 VLLVGDTGCGKTTVCQVLAECLSKQL 1213
                    5799****************999988 PP

  == domain 5  score: 5.1 bits;  conditional E-value: 0.093
  RNA_helicase    1 iwlyGpsgeGKStlakeLakal 22  
                    i+l G++g+GK++l+  La++ 
    EPX73650.1 1560 ILLEGSPGVGKTSLISALAREC 1581
                    6799**************9986 PP

  == domain 6  score: -0.9 bits;  conditional E-value: 6.7
  RNA_helicase    2 wlyGpsgeGKStlakeLak 20  
                    +l+Gps  GK+++++ La+
    EPX73650.1 1871 ILVGPSASGKTRTIRLLAA 1889
                    789**********999876 PP

  == domain 7  score: -1.4 bits;  conditional E-value: 9.9
  RNA_helicase    4 yGpsgeGKStlakeLakallkklklkkkdsvysrnpeddfwdgYtgqevvvidDfgqvkdee 65  
                    +G+ ++GK + +k+++  +++++   kkd++++r ++ +     t q ++ idD +++++++
    EPX73650.1 4480 QGDFRTGKRLNMKRIIPYIASQF---KKDKIWMRRVKPSK---RTYQVMIAIDDSKSMSESK 4535
                    5777899999**********888...66778886666543...3345667777766666554 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0      0.34   1.1e+02      36      61 ..     155     180 ..     133     190 .. 0.84
   2 ?    5.5   0.1     0.043        13      34      66 ..     468     500 ..     455     517 .. 0.81
   3 ?    1.2   0.0      0.85   2.7e+02      18      60 ..     882     921 ..     868     935 .. 0.73
   4 !   13.9   0.0   0.00011     0.034      33      86 ..    1185    1238 ..    1180    1250 .. 0.88
   5 ?   -1.5   0.0       6.1   1.9e+03      77     123 ..    1301    1347 ..    1298    1382 .. 0.74
   6 !    9.5   0.0    0.0024      0.74      33      59 ..    1557    1583 ..    1538    1594 .. 0.78
   7 ?   -1.8   0.0       7.2   2.3e+03      37      75 ..    1871    1906 ..    1867    1919 .. 0.76

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.34
      RuvB_N  36 vllyGpPGlGkttlakiiakelgvkl 61 
                 +ll+Gp G+Gkt + + ia+ lg ++
  EPX73650.1 155 LLLAGPEGMGKTYFITQIAALLGQRI 180
                 69**********99999998887665 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.043
      RuvB_N  34 dhvllyGpPGlGkttlakiiakelgvklkitsg 66 
                 + +ll+G  G Gktt  +++a+ lg k+ +   
  EPX73650.1 468 EPLLLVGETGTGKTTTVQLLANLLGQKVTVINM 500
                 4579********************999887655 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.85
      RuvB_N  18 klkifieaakkreealdhvllyGpPGlGkttlakiiakelgvk 60 
                 +l  + +a+ +r   +  +l++Gp   Gkt++ + ia + g k
  EPX73650.1 882 NLLNITRACSTR---MFPILIQGPTSSGKTSMIEYIAGKTGHK 921
                 544444444444...5569***************999887765 PP

  == domain 4  score: 13.9 bits;  conditional E-value: 0.00011
      RuvB_N   33 ldhvllyGpPGlGkttlakiiakelgvklkitsgPvlekagdlaalltnleekd 86  
                   + vll+G  G Gktt+++++a+ l  +l+i  +    ++gd+++    l+++ 
  EPX73650.1 1185 KEPVLLVGDTGCGKTTVCQVLAECLSKQLHIVNAHQDTENGDIIGAQRPLRNRS 1238
                  5679******************************99999999998877777665 PP

  == domain 5  score: -1.5 bits;  conditional E-value: 6.1
      RuvB_N   77 alltnleekdvlfideihrlsraveevlysamedfrldivigkGpsa 123 
                  al++ ++ +d +++dei   + +v e l s +e  r   ++++  +a
  EPX73650.1 1301 ALVSAMKGGDFFLLDEISLADDSVLERLNSVLEISRTLTLVEHNDAA 1347
                  7889999*******************999999977666566555554 PP

  == domain 6  score: 9.5 bits;  conditional E-value: 0.0024
      RuvB_N   33 ldhvllyGpPGlGkttlakiiakelgv 59  
                     +ll G+PG+Gkt+l + +a+e g 
  EPX73650.1 1557 RKPILLEGSPGVGKTSLISALARECGY 1583
                  3569*******************9886 PP

  == domain 7  score: -1.8 bits;  conditional E-value: 7.2
      RuvB_N   37 llyGpPGlGkttlakiiakelgvklkitsgPvlekagdl 75  
                  +l+Gp   Gkt   +++a+  gv+lk  +   ++ + d 
  EPX73650.1 1871 ILVGPSASGKTRTIRLLAAVCGVDLKEMA---INSEIDT 1906
                  799********************999754...4444444 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.0     0.017       5.4       9      36 ..     151     178 ..     145     191 .. 0.85
   2 !    8.7   0.2    0.0064         2       8      37 ..     465     494 ..     458     506 .. 0.82
   3 ?    6.3   0.0     0.036        11      10      38 ..    1185    1213 ..    1180    1224 .. 0.86
   4 ?    7.1   0.0     0.021       6.5       7      31 ..    1554    1578 ..    1547    1583 .. 0.81
   5 ?    2.2   0.0      0.64     2e+02      10      34 ..    1867    1891 ..    1859    1902 .. 0.81

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.017
      AAA_19   9 kekvllvtaGpGtGKTrvlkhivallve 36 
                 ++++ll+ ++ G+GKT+ +++i all +
  EPX73650.1 151 RKQPLLLAGPEGMGKTYFITQIAALLGQ 178
                 67788888888***********999876 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0064
      AAA_19   8 lkekvllvtaGpGtGKTrvlkhivallvel 37 
                  ++++ll+++  GtGKT++++   +ll + 
  EPX73650.1 465 QTNEPLLLVGETGTGKTTTVQLLANLLGQK 494
                 57899***************9988877665 PP

  == domain 3  score: 6.3 bits;  conditional E-value: 0.036
      AAA_19   10 ekvllvtaGpGtGKTrvlkhivallvelg 38  
                  ++++l+++  G+GKT+v +   ++l ++ 
  EPX73650.1 1185 KEPVLLVGDTGCGKTTVCQVLAECLSKQL 1213
                  6899***************9999998765 PP

  == domain 4  score: 7.1 bits;  conditional E-value: 0.021
      AAA_19    7 alkekvllvtaGpGtGKTrvlkhiv 31  
                     +k++l+ + pG GKT ++ +  
  EPX73650.1 1554 LQVRKPILLEGSPGVGKTSLISALA 1578
                  456899**************98766 PP

  == domain 5  score: 2.2 bits;  conditional E-value: 0.64
      AAA_19   10 ekvllvtaGpGtGKTrvlkhivall 34  
                  + +++++++  +GKTr+++   a++
  EPX73650.1 1867 NWPCILVGPSASGKTRTIRLLAAVC 1891
                  568999999*********9887765 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0    0.0022      0.68      26      55 ..     145     174 ..     133     177 .. 0.90
   2 ?    3.1   0.1      0.19        60      33      53 ..     467     487 ..     458     496 .. 0.84
   3 !   12.1   0.0   0.00033       0.1      25      60 ..    1177    1212 ..    1168    1226 .. 0.83
   4 ?    4.2   0.0     0.089        28      34      56 ..    1558    1580 ..    1549    1582 .. 0.87
   5 ?    3.7   0.0      0.13        40      29      97 ..    1863    1929 ..    1848    1986 .. 0.75
   6 ?   -2.4   0.1       9.6     3e+03     130     156 ..    4643    4670 ..    4634    4678 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0022
      AAA_25  26 vkgllpagelallaGapgtGKttlaldlal 55 
                 v  +l+++   llaG++g GKt + +++a+
  EPX73650.1 145 VSPFLVRKQPLLLAGPEGMGKTYFITQIAA 174
                 6789999********************996 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.19
      AAA_25  33 gelallaGapgtGKttlaldl 53 
                 +e  ll+G +gtGKtt +  l
  EPX73650.1 467 NEPLLLVGETGTGKTTTVQLL 487
                 67789***********77655 PP

  == domain 3  score: 12.1 bits;  conditional E-value: 0.00033
      AAA_25   25 lvkgllpagelallaGapgtGKttlaldlalavatG 60  
                  lv  +l a+e +ll+G++g+GKtt++  la ++++ 
  EPX73650.1 1177 LVWHCLQAKEPVLLVGDTGCGKTTVCQVLAECLSKQ 1212
                  56678899*******************999887755 PP

  == domain 4  score: 4.2 bits;  conditional E-value: 0.089
      AAA_25   34 elallaGapgtGKttlaldlala 56  
                  + +ll G pg+GKt l + la +
  EPX73650.1 1558 KPILLEGSPGVGKTSLISALARE 1580
                  5689***************9975 PP

  == domain 5  score: 3.7 bits;  conditional E-value: 0.13
      AAA_25   29 llpagelallaGapgtGKttlaldlalavatGkpwlgpvap.eqgkVlyvsaEdsedelrrRlravgeal 97  
                  ++ +++ ++l+G++++GKt  ++ l +av+ G  + + +a    + ++ + +E  + ++ r+++a + +l
  EPX73650.1 1863 CINKNWPCILVGPSASGKTR-TIRLLAAVC-GVDLKE-MAInSEIDTMDLLGEYEQVDISRKISAFLLQL 1929
                  5788999***********96.566666677.333333.33227777777777777777888888777777 PP

  == domain 6  score: -2.4 bits;  conditional E-value: 9.6
      AAA_25  130 vdaleaaieeveg..vrlvviDplsralg 156 
                  ++++ ++++e e+  ++++++D+++ +  
  EPX73650.1 4643 IRRILRRAQE-EKvmIVFIILDNVNDMKK 4670
                  6778888888.77799********99876 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0       1.3   4.2e+02       8      42 ..     149     183 ..     142     219 .. 0.79
   2 !   17.7   0.0   1.2e-05    0.0039       1      45 [.     457     501 ..     457     614 .. 0.78
   3 ?    2.8   0.0      0.49   1.6e+02      15      37 ..     898     920 ..     895     958 .. 0.80
   4 !   16.5   0.0     3e-05    0.0093       8      66 ..    1182    1242 ..    1178    1305 .. 0.62
   5 ?    3.7   0.0      0.26        83      15      34 ..    1561    1580 ..    1553    1594 .. 0.88
   6 ?    3.1   0.0      0.39   1.2e+02       7      37 ..    1863    1893 ..    1857    1959 .. 0.76

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 1.3
                 EETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   8 lkegekvaivGenGaGKStLlkllagllkpteGei 42 
                 l + + + + G+ G GK+ ++  +a ll +   +i
  EPX73650.1 149 LVRKQPLLLAGPEGMGKTYFITQIAALLGQRIVRI 183
                 556677899***********999998876655555 PP

  == domain 2  score: 17.7 bits;  conditional E-value: 1.2e-05
                 EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEET CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   1 lknvslklkegekvaivGenGaGKStLlkllagllkpteGeilld 45 
                 l+++s+ ++ +e + +vGe+G+GK+t ++lla+ll ++   i++ 
  EPX73650.1 457 LEKISVAVQTNEPLLLVGETGTGKTTTVQLLANLLGQKVTVINMS 501
                 6789****************************9997655555444 PP

  == domain 3  score: 2.8 bits;  conditional E-value: 0.49
                 EEEESTTSSHHHHHHHHTTSS-- CS
                 xxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  15 aivGenGaGKStLlkllagllkp 37 
                  i G++ +GK+++++ +ag++  
  EPX73650.1 898 LIQGPTSSGKTSMIEYIAGKTGH 920
                 588****************9865 PP

  == domain 4  score: 16.5 bits;  conditional E-value: 3e-05
                  EETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGG...B-HHHCCHCEEEE-S CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxx RF
    ABC_tran    8 lkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlke...qeleslrkeigvlpq 66  
                  l++ e v +vG++G+GK+t++++la+ l+++   ++   +d+++   +  ++  ++ + ++ 
  EPX73650.1 1182 LQAKEPVLLVGDTGCGKTTVCQVLAECLSKQLHIVNA-HQDTENgdiIGAQRPLRNRSLIKN 1242
                  788999*******************999986555532.233333344333333333333333 PP

  == domain 5  score: 3.7 bits;  conditional E-value: 0.26
                  EEEESTTSSHHHHHHHHTTS CS
                  xxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   15 aivGenGaGKStLlkllagl 34  
                   + G+ G GK++L+++la++
  EPX73650.1 1561 LLEGSPGVGKTSLISALARE 1580
                  6779*************987 PP

  == domain 6  score: 3.1 bits;  conditional E-value: 0.39
                  EEETTSEEEEEESTTSSHHHHHHHHTTSS-- CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran    7 klkegekvaivGenGaGKStLlkllagllkp 37  
                   ++++    +vG++ +GK+  ++lla     
  EPX73650.1 1863 CINKNWPCILVGPSASGKTRTIRLLAAVCGV 1893
                  567777788**************99976555 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.064        20       4      29 ..     155     180 ..     152     190 .. 0.84
   2 !   11.0   0.3   0.00079      0.25       4      28 ..     470     494 ..     467     502 .. 0.86
   3 !    9.8   0.0    0.0018      0.57       4      28 ..    1188    1212 ..    1185    1221 .. 0.89
   4 ?    1.2   0.0      0.77   2.4e+02       4      23 ..    1560    1579 ..    1557    1583 .. 0.90
   5 ?    0.6   0.0       1.2   3.7e+02       5      34 ..    1871    1900 ..    1869    1920 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.064
                 EEEEESTTSSHHHHHHHHHHHHHHTT CS
       SRP54   4 illvGlqGaGKTttlaKLaallkkeg 29 
                 +ll+G++G+GKT  ++++aall ++ 
  EPX73650.1 155 LLLAGPEGMGKTYFITQIAALLGQRI 180
                 799****************9987765 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00079
                 EEEEESTTSSHHHHHHHHHHHHHHT CS
       SRP54   4 illvGlqGaGKTttlaKLaallkke 28 
                 +llvG +G+GKTtt+  La+ll ++
  EPX73650.1 470 LLLVGETGTGKTTTVQLLANLLGQK 494
                 69*****************999776 PP

  == domain 3  score: 9.8 bits;  conditional E-value: 0.0018
                  EEEEESTTSSHHHHHHHHHHHHHHT CS
       SRP54    4 illvGlqGaGKTttlaKLaallkke 28  
                  +llvG +G GKTt +  La+ l+k+
  EPX73650.1 1188 VLLVGDTGCGKTTVCQVLAECLSKQ 1212
                  79*******************9998 PP

  == domain 4  score: 1.2 bits;  conditional E-value: 0.77
                  EEEEESTTSSHHHHHHHHHH CS
       SRP54    4 illvGlqGaGKTttlaKLaa 23  
                  ill G  G+GKT+ ++ La+
  EPX73650.1 1560 ILLEGSPGVGKTSLISALAR 1579
                  8999**************97 PP

  == domain 5  score: 0.6 bits;  conditional E-value: 1.2
                  EEEESTTSSHHHHHHHHHHHHHHTTS-EEE CS
       SRP54    5 llvGlqGaGKTttlaKLaallkkegkkvll 34  
                  +lvG+  +GKT t+  Laa++  + k++++
  EPX73650.1 1871 ILVGPSASGKTRTIRLLAAVCGVDLKEMAI 1900
                  79****************988766665555 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.1      0.15        47      25      48 ..     155     178 ..     150     190 .. 0.89
   2 ?   -1.3   0.0       3.7   1.2e+03      95     159 ..     206     271 ..     184     295 .. 0.72
   3 !    7.8   0.0     0.006       1.9      15      49 ..     460     494 ..     454     514 .. 0.84
   4 ?    2.1   0.0      0.33     1e+02     110     159 ..     965    1015 ..     948    1030 .. 0.85
   5 ?    4.2   0.0     0.078        24      25      48 ..    1188    1211 ..    1182    1242 .. 0.79
   6 ?    1.1   0.0      0.71   2.2e+02     100     159 ..    1300    1364 ..    1295    1379 .. 0.74
   7 ?    3.3   0.0      0.14        45      23      42 ..    1558    1577 ..    1541    1581 .. 0.82
   8 ?    0.0   0.0       1.5   4.6e+02     109     162 ..    1630    1684 ..    1618    1694 .. 0.86
   9 ?   -2.4   0.0       8.2   2.6e+03      25      45 ..    1870    1890 ..    1861    1915 .. 0.75

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.15
  Mg_chelatase  25 lllvGppGsGKtmlakrlpsllpp 48 
                   lll+Gp G GKt  ++++++ll +
    EPX73650.1 155 LLLAGPEGMGKTYFITQIAALLGQ 178
                   89*****************99975 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 3.7
  Mg_chelatase  95 skpkpGeisla..hnGvLfLDElpefkrkvlevLRePledgevtisrakakvefparfqlvaamNpc 159
                    + +pG ++ a  h   L+L  + +  ++vl +L   le++++++  ++ ++ + a+   v a+  +
    EPX73650.1 206 FEWQPGVLTQAvrHGKWLLLSNIEKAPAEVLSILLPLLEKRQLVVP-SRGETIYAANSFQVFATSST 271
                   4566777787743445799999999*******99988899888776.55566677776666665544 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.006
  Mg_chelatase  15 leiaaaGgHnlllvGppGsGKtmlakrlpsllppl 49 
                   + +a+  +  lllvG  G+GKt   + l++ll + 
    EPX73650.1 460 ISVAVQTNEPLLLVGETGTGKTTTVQLLANLLGQK 494
                   6789999999*******************999764 PP

  == domain 4  score: 2.1 bits;  conditional E-value: 0.33
  Mg_chelatase  110 LfLDElpefkrkvlevLRePled.gevtisrakakvefparfqlvaamNpc 159 
                    ++LDEl    ++vle+L + l+d +e+ i  +++ v+   +f+l a+ Np 
    EPX73650.1  965 IVLDELNLAPTDVLEALNRLLDDnRELFIPETESLVKPHPDFMLFATQNPP 1015
                    78*******************8625799999999999999*********94 PP

  == domain 5  score: 4.2 bits;  conditional E-value: 0.078
  Mg_chelatase   25 lllvGppGsGKtmlakrlpsllpp 48  
                    +llvG  G+GKt + + l++ l++
    EPX73650.1 1188 VLLVGDTGCGKTTVCQVLAECLSK 1211
                    89***********99999888765 PP

  == domain 6  score: 1.1 bits;  conditional E-value: 0.71
  Mg_chelatase  100 GeislahnG..vLfLDElpefkrkvlevLRePle.dgevtisrakakvefpar..fqlvaamNpc 159 
                    G++  a +G   ++LDE++  + +vle L + le ++++t+  ++  +   a+  f + a+mNp 
    EPX73650.1 1300 GALVSAMKGgdFFLLDEISLADDSVLERLNSVLEiSRTLTLVEHNDAAVLTANegFAFFATMNPG 1364
                    666666666445679*******************4456777777776666665448889999984 PP

  == domain 7  score: 3.3 bits;  conditional E-value: 0.14
  Mg_chelatase   23 HnlllvGppGsGKtmlakrl 42  
                      +ll G+pG GKt l+++l
    EPX73650.1 1558 KPILLEGSPGVGKTSLISAL 1577
                    569************99987 PP

  == domain 8  score: 0.0 bits;  conditional E-value: 1.5
  Mg_chelatase  109 vLfLDElpefkrkvlevLRePled.gevtisrakakvefparfqlvaamNpcpcg 162 
                     ++LDEl   +++vle L   l++ ge  i   ++ ++   +f + aa Np   g
    EPX73650.1 1630 WVLLDELNLASQTVLEGLNACLDHrGEAYIPELDRVFKAHPNFRVFAAQNPQSQG 1684
                    4689******************86379999999999999999********97665 PP

  == domain 9  score: -2.4 bits;  conditional E-value: 8.2
  Mg_chelatase   25 lllvGppGsGKtmlakrlpsl 45  
                     +lvGp+ sGKt  ++ l+++
    EPX73650.1 1870 CILVGPSASGKTRTIRLLAAV 1890
                    589*********988776655 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.0    0.0095         3       2      26 ..     154     178 ..     153     182 .. 0.89
   2 ?    7.2   0.2     0.014       4.4       2      26 ..     469     493 ..     468     498 .. 0.89
   3 ?   -2.1   0.0       9.8   3.1e+03       3      21 ..     897     915 ..     896     920 .. 0.87
   4 !    8.9   0.0    0.0042       1.3       2      26 ..    1187    1211 ..    1186    1216 .. 0.90
   5 ?    7.0   0.0     0.016       5.1       2      23 ..    1559    1580 ..    1558    1583 .. 0.90

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0095
                 CEEEEC-TTTCHHHHHHHHHHHHCT CS
       NACHT   2 lvilqGeaGsGKTtLlqklalawae 26 
                 +++l G+ G+GKT+++ ++a ++ +
  EPX73650.1 154 PLLLAGPEGMGKTYFITQIAALLGQ 178
                 5799****************99877 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.014
                 CEEEEC-TTTCHHHHHHHHHHHHCT CS
       NACHT   2 lvilqGeaGsGKTtLlqklalawae 26 
                 +++l Ge G GKTt +q la ++ +
  EPX73650.1 469 PLLLVGETGTGKTTTVQLLANLLGQ 493
                 6899***************999877 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 9.8
                 EEEEC-TTTCHHHHHHHHH CS
       NACHT   3 vilqGeaGsGKTtLlqkla 21 
                 +++qG+  sGKT +++ +a
  EPX73650.1 897 ILIQGPTSSGKTSMIEYIA 915
                 89***********998887 PP

  == domain 4  score: 8.9 bits;  conditional E-value: 0.0042
                  CEEEEC-TTTCHHHHHHHHHHHHCT CS
       NACHT    2 lvilqGeaGsGKTtLlqklalawae 26  
                  +v+l G+ G+GKTt  q la+++ +
  EPX73650.1 1187 PVLLVGDTGCGKTTVCQVLAECLSK 1211
                  699****************998876 PP

  == domain 5  score: 7.0 bits;  conditional E-value: 0.016
                  CEEEEC-TTTCHHHHHHHHHHH CS
       NACHT    2 lvilqGeaGsGKTtLlqklala 23  
                  +++l+G +G+GKT L+  la++
  EPX73650.1 1559 PILLEGSPGVGKTSLISALARE 1580
                  689*************999976 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0    0.0056       1.7      40      68 ..     145     173 ..     102     187 .. 0.80
   2 ?    3.9   0.0      0.12        38      44      62 ..     464     482 ..     430     502 .. 0.79
   3 ?   -1.1   0.0       4.2   1.3e+03      50     123 ..     897     976 ..     886     986 .. 0.70
   4 ?    4.3   0.0     0.091        29      44      69 ..    1182    1207 ..    1167    1218 .. 0.80
   5 ?    6.1   0.0     0.026       8.1      42      71 ..    1552    1581 ..    1531    1600 .. 0.76
   6 ?   -0.9   0.0       3.7   1.2e+03      42      62 ..    1862    1882 ..    1832    1901 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0056
   IstB_IS21  40 tlsfiekkenivllGpsGvGKshlaialg 68 
                    f+ +k+ ++l Gp G+GK+++ + ++
  EPX73650.1 145 VSPFLVRKQPLLLAGPEGMGKTYFITQIA 173
                 456999****************9876554 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.12
   IstB_IS21  44 iekkenivllGpsGvGKsh 62 
                 ++++e ++l+G +G+GK+ 
  EPX73650.1 464 VQTNEPLLLVGETGTGKTT 482
                 78999************95 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 4.2
   IstB_IS21  50 ivllGpsGvGKshlaialgveavraglsvlfvrvedLveelkrarrdgklara......lkrllkvdllilDdlgllpld 123
                 i++ Gp+  GK+ +   ++ ++ ++ +++     +dL e l    +d+k +        +++l +   ++lD+l l p d
  EPX73650.1 897 ILIQGPTSSGKTSMIEYIAGKTGHKFVRINNHEHTDLQEYLGSYVTDDKGSLVfkegilVEALKNGYWIVLDELNLAPTD 976
                 7899********99999999999999999999999999888765555543333001111333444456777877777766 PP

  == domain 4  score: 4.3 bits;  conditional E-value: 0.091
   IstB_IS21   44 iekkenivllGpsGvGKshlaialgv 69  
                  +++ke ++l+G +G GK+ +   l+ 
  EPX73650.1 1182 LQAKEPVLLVGDTGCGKTTVCQVLAE 1207
                  7899**************98777764 PP

  == domain 5  score: 6.1 bits;  conditional E-value: 0.026
   IstB_IS21   42 sfiekkenivllGpsGvGKshlaialgvea 71  
                    ++ ++ i+l G +GvGK+ l  al++e 
  EPX73650.1 1552 RALQVRKPILLEGSPGVGKTSLISALAREC 1581
                  456667889*****************9875 PP

  == domain 6  score: -0.9 bits;  conditional E-value: 3.7
   IstB_IS21   42 sfiekkenivllGpsGvGKsh 62  
                    i+k+  ++l+Gps  GK+ 
  EPX73650.1 1862 TCINKNWPCILVGPSASGKTR 1882
                  45888899***********95 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0      0.14        44      86     130 ..     138     183 ..     123     189 .. 0.76
   2 ?    6.9   0.6     0.017       5.4      88     132 ..     455     500 ..     431     506 .. 0.76
   3 ?   -0.6   0.0       3.4   1.1e+03     102     132 ..     897     927 ..     872     932 .. 0.73
   4 ?    5.8   0.0     0.037        12     100     133 ..    1186    1219 ..    1175    1226 .. 0.77
   5 !    9.3   0.0     0.003      0.95      85     122 ..    1542    1580 ..    1530    1594 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.14
                  THTTHHHHHHHCTT.SEEEEECSTTSSHHHHHHHHCTT-----S-- CS
  RsgA_GTPase  86 tkegleelkellkd.ktsvlvGqSGvGKStLinallpelelktgev 130
                   ke+l+++++ l   +  +l+G+ G+GK+ +i +++  l +++  +
   EPX73650.1 138 VKENLSRVSPFLVRkQPLLLAGPEGMGKTYFITQIAALLGQRIVRI 183
                  4678888888776548999*************99988777776555 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.017
                  TTHHHHHHHCTT.SEEEEECSTTSSHHHHHHHHCTT-----S---- CS
  RsgA_GTPase  88 egleelkellkd.ktsvlvGqSGvGKStLinallpelelktgevse 132
                  + le+++ +++  +  +lvG++G GK+t +  l++ l +k+  +  
   EPX73650.1 455 SLLEKISVAVQTnEPLLLVGETGTGKTTTVQLLANLLGQKVTVINM 500
                  56677777777658899**************999988777776654 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 3.4
                  EEEECSTTSSHHHHHHHHCTT-----S---- CS
  RsgA_GTPase 102 svlvGqSGvGKStLinallpelelktgevse 132
                  +++ G++  GK+++i+ +++++  k   + +
   EPX73650.1 897 ILIQGPTSSGKTSMIEYIAGKTGHKFVRINN 927
                  4678***************998777666665 PP

  == domain 4  score: 5.8 bits;  conditional E-value: 0.037
                   SEEEEECSTTSSHHHHHHHHCTT-----S----- CS
  RsgA_GTPase  100 ktsvlvGqSGvGKStLinallpelelktgevsek 133 
                   + ++lvG +G GK+t+  +l++ l+ + + v ++
   EPX73650.1 1186 EPVLLVGDTGCGKTTVCQVLAECLSKQLHIVNAH 1219
                   66889***************99876666555444 PP

  == domain 5  score: 9.3 bits;  conditional E-value: 0.003
                   TTHTTHHHHHHHCTT.SEEEEECSTTSSHHHHHHHHCTT CS
  RsgA_GTPase   85 ktkegleelkellkd.ktsvlvGqSGvGKStLinallpe 122 
                   +tk +++++ ++l+  k ++l G+ GvGK++Li al+ e
   EPX73650.1 1542 TTKVNAAKVVRALQVrKPILLEGSPGVGKTSLISALARE 1580
                   4556777788888876889999*************9876 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.63     2e+02      24      46 ..     154     176 ..     144     183 .. 0.78
   2 ?    7.0   0.1     0.016       4.9      18      45 ..     463     490 ..     456     504 .. 0.74
   3 ?    2.4   0.0      0.43   1.3e+02      25      39 ..     897     911 ..     888     915 .. 0.87
   4 ?    4.8   0.0     0.073        23      22      38 ..    1185    1201 ..    1175    1211 .. 0.82
   5 ?    3.7   0.0      0.16        51      23      42 ..    1558    1577 ..    1547    1579 .. 0.82
   6 ?   -0.4   0.0       3.1   9.7e+02      25      36 ..    1870    1881 ..    1860    1888 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.63
      AAA_29  24 atlltGpsGsGKSTllDAiqalL 46 
                   ll+Gp G GK+ ++  i+alL
  EPX73650.1 154 PLLLAGPEGMGKTYFITQIAALL 176
                 479**********9996666555 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.016
      AAA_29  18 eidlkgatlltGpsGsGKSTllDAiqal 45 
                  +++++  ll+G++G+GK+T +  ++ l
  EPX73650.1 463 AVQTNEPLLLVGETGTGKTTTVQLLANL 490
                 55666689************98544444 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.43
      AAA_29  25 tlltGpsGsGKSTll 39 
                 +l+ Gp+ sGK++++
  EPX73650.1 897 ILIQGPTSSGKTSMI 911
                 69**********998 PP

  == domain 4  score: 4.8 bits;  conditional E-value: 0.073
      AAA_29   22 kgatlltGpsGsGKSTl 38  
                  k+ +ll+G++G GK+T+
  EPX73650.1 1185 KEPVLLVGDTGCGKTTV 1201
                  4569************7 PP

  == domain 5  score: 3.7 bits;  conditional E-value: 0.16
      AAA_29   23 gatlltGpsGsGKSTllDAi 42  
                    +ll G  G+GK++l+ A+
  EPX73650.1 1558 KPILLEGSPGVGKTSLISAL 1577
                  4589*************987 PP

  == domain 6  score: -0.4 bits;  conditional E-value: 3.1
      AAA_29   25 tlltGpsGsGKS 36  
                  ++l+Gps sGK+
  EPX73650.1 1870 CILVGPSASGKT 1881
                  689********7 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.0    0.0071       2.2       3      28 ..     153     182 ..     151     195 .. 0.78
   2 ?    7.1   0.0     0.013         4       5      33 ..     470     502 ..     466     628 .. 0.67
   3 ?   -1.8   0.1       6.8   2.1e+03       5      22 ..     897     914 ..     896     926 .. 0.83
   4 ?    3.6   0.0      0.15        48       5      35 ..    1188    1226 ..    1184    1294 .. 0.81
   5 ?    3.2   0.0       0.2        63       5      22 ..    1560    1577 ..    1557    1613 .. 0.84
   6 ?    0.5   0.0       1.4   4.4e+02       2      22 ..    1867    1887 ..    1866    1904 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0071
      AAA_24   3 lkiliyGpsgiGKTtlakel....gpkplf 28 
                 + +l+ Gp+g+GKT++++++    g++++ 
  EPX73650.1 153 QPLLLAGPEGMGKTYFITQIaallGQRIVR 182
                 5689**************996666666655 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.013
      AAA_24   5 iliyGpsgiGKTtlakel....gpkplfidtek 33 
                 +l++G+ g+GKTt++  l    g+k+ +i++ +
  EPX73650.1 470 LLLVGETGTGKTTTVQLLanllGQKVTVINMSQ 502
                 689************999888888888885433 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 6.8
      AAA_24   5 iliyGpsgiGKTtlakel 22 
                 ili Gp  +GKT+++  +
  EPX73650.1 897 ILIQGPTSSGKTSMIEYI 914
                 7999*********99876 PP

  == domain 4  score: 3.6 bits;  conditional E-value: 0.15
      AAA_24    5 iliyGpsgiGKTtlakel...gpkplfi.....dtekGl 35  
                  +l++G+ g GKTt++  l     k l i     dte+G 
  EPX73650.1 1188 VLLVGDTGCGKTTVCQVLaecLSKQLHIvnahqDTENGD 1226
                  799***********9999777677777778888888875 PP

  == domain 5  score: 3.2 bits;  conditional E-value: 0.2
      AAA_24    5 iliyGpsgiGKTtlakel 22  
                  il+ G++g+GKT+l++ l
  EPX73650.1 1560 ILLEGSPGVGKTSLISAL 1577
                  7899**********9988 PP

  == domain 6  score: 0.5 bits;  conditional E-value: 1.4
      AAA_24    2 klkiliyGpsgiGKTtlakel 22  
                  ++ ++++Gps +GKT +++ l
  EPX73650.1 1867 NWPCILVGPSASGKTRTIRLL 1887
                  566899**********99877 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0       1.8   5.6e+02      29      83 ..     131     182 ..     123     190 .. 0.75
   2 ?    5.8   0.0     0.021       6.5      54      89 ..     468     502 ..     457     508 .. 0.79
   3 !    7.2   0.0    0.0081       2.5      55      90 ..    1187    1221 ..    1179    1234 .. 0.84
   4 !    7.5   0.0    0.0062       1.9      43      86 ..    1546    1590 ..    1534    1601 .. 0.71

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 1.8
      DUF815  29 dLvgidkqkealventeqfleglpannvLLwGarGtGKSslvkallneyaeegLr 83 
                 +Lv+ ++ ke+l +    +++++p   +LL G  G+GK   +  + + + ++ +r
  EPX73650.1 131 TLVETESVKENLSRVSPFLVRKQP---LLLAGPEGMGKTYFITQIAALLGQRIVR 182
                 567777777777776666666655...8**********99998887777666655 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.021
      DUF815  54 nnvLLwGarGtGKSslvkallneyaeegLrlievek 89 
                 + +LL+G+ GtGK ++v+ l  ++  +++ +i++++
  EPX73650.1 468 EPLLLVGETGTGKTTTVQLLA-NLLGQKVTVINMSQ 502
                 5589*************9665.56667788887766 PP

  == domain 3  score: 7.2 bits;  conditional E-value: 0.0081
      DUF815   55 nvLLwGarGtGKSslvkallneyaeegLrlieveke 90  
                   vLL+G+ G+GK ++++ +l+e+ +++L++++ +++
  EPX73650.1 1187 PVLLVGDTGCGKTTVCQ-VLAECLSKQLHIVNAHQD 1221
                  59**********98776.667888889999998775 PP

  == domain 4  score: 7.5 bits;  conditional E-value: 0.0062
      DUF815   43 nteqfleglpa.nnvLLwGarGtGKSslvkallneyaeegLrlie 86  
                  n+++ ++ l+  + +LL G+ G+GK sl+ al +e+    +r+  
  EPX73650.1 1546 NAAKVVRALQVrKPILLEGSPGVGKTSLISALARECGYPLIRINL 1590
                  555555555541469******************998877666544 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.2     0.029       9.2       4      24 ..     470     490 ..     467     513 .. 0.72
   2 ?   -0.4   0.0       2.8   8.8e+02       4      24 ..     897     917 ..     894     924 .. 0.86
   3 !   12.6   0.0   0.00027     0.085       4      23 ..    1188    1207 ..    1185    1223 .. 0.86
   4 ?    1.0   0.0         1   3.2e+02       2      23 ..    1558    1579 ..    1557    1583 .. 0.88
   5 ?    1.6   0.0      0.66   2.1e+02       5      63 ..    1871    1932 ..    1869    1948 .. 0.74

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.029
   PduV-EutP   4 illiGkvgsGKttLtqalkge 24 
                 +ll+G++g+GKtt  q l + 
  EPX73650.1 470 LLLVGETGTGKTTTVQLLANL 490
                 69*************999863 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 2.8
   PduV-EutP   4 illiGkvgsGKttLtqalkge 24 
                 il+ G++ sGKt++ + + g+
  EPX73650.1 897 ILIQGPTSSGKTSMIEYIAGK 917
                 8899**********9988775 PP

  == domain 3  score: 12.6 bits;  conditional E-value: 0.00027
   PduV-EutP    4 illiGkvgsGKttLtqalkg 23  
                  +ll+G +g+GKtt++q l +
  EPX73650.1 1188 VLLVGDTGCGKTTVCQVLAE 1207
                  89**************9976 PP

  == domain 4  score: 1.0 bits;  conditional E-value: 1
   PduV-EutP    2 kkilliGkvgsGKttLtqalkg 23  
                  k ill G+ g+GKt+L  al  
  EPX73650.1 1558 KPILLEGSPGVGKTSLISALAR 1579
                  669999***********99975 PP

  == domain 5  score: 1.6 bits;  conditional E-value: 0.66
   PduV-EutP    5 lliGkvgsGKttLtqalkgeelkYkktqaiefsdeviDtPGeyle...nrklysalivtsae 63  
                  +l+G++ sGKt   + l        k  ai+ + +++D  Gey +   +rk++  l  +s++
  EPX73650.1 1871 ILVGPSASGKTRTIRLLAAVCGVDLKEMAINSEIDTMDLLGEYEQvdiSRKISAFLLQLSHD 1932
                  89*********9999999887777889999999999*****996622234455555555554 PP

>> CbiA  CobQ/CobB/MinD/ParA nucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0      0.19        61       8      39 ..     161     193 ..     155     390 .. 0.85
   2 !    9.9   0.0    0.0023      0.73       6      55 ..     474     585 ..     470     855 .. 0.67
   3 ?    4.8   0.0     0.089        28       6      31 ..    1192    1216 ..    1188    1336 .. 0.84
   4 ?   -0.6   0.0       4.1   1.3e+03       8      21 ..    1566    1579 ..    1560    1845 .. 0.70

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.19
                 TTSSHHHHHHHHHHHHHHTT--EEEEE.EEESS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxx RF
        CbiA   8 GGvGKTtlaanLaralarrglrVllvD.aDpqa 39 
                  G GKT + + +a++l +r  r+ l D +Dp +
  EPX73650.1 161 EGMGKTYFITQIAALLGQRIVRIHLTDsTDPKM 193
                 599************************999985 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.0023
                 SSTTSSHHHHHHHHHHHHHHTT--EEEEEEEESSCCCCHHTTEB-HHHH.................................................. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.................................................. RF
        CbiA   6 tkGGvGKTtlaanLaralarrglrVllvDaDpqannlaileglendiep.................................................. 54 
                 +  G+GKTt++  La +l +   +V ++ +  q++++ +l g ++ i+                                                   
  EPX73650.1 474 GETGTGKTTTVQLLANLLGQ---KVTVINMSQQTESSDMLGGYKP-INIttlglplheefmslfettfsvkknmkfvaaastsarrfrwktclkiwnea 568
                 678***************99...*****99999999884433333.33246766666666666666666666666666666666555555555555555 PP

                 ................C CS
                 ................x RF
        CbiA  55 ................d 55 
                                  
  EPX73650.1 569 lslskslfsktrsqenP 585
                 55555555555555550 PP

  == domain 3  score: 4.8 bits;  conditional E-value: 0.089
                  SSTTSSHHHHHHHHHHHHHHTT--EE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxx RF
        CbiA    6 tkGGvGKTtlaanLaralarrglrVl 31  
                  +  G GKTt++  La +l++ +l+++
  EPX73650.1 1192 GDTGCGKTTVCQVLAECLSK-QLHIV 1216
                  678****************9.66655 PP

  == domain 4  score: -0.6 bits;  conditional E-value: 4.1
                  TTSSHHHHHHHHHH CS
                  xxxxxxxxxxxxxx RF
        CbiA    8 GGvGKTtlaanLar 21  
                   GvGKT+l  +Lar
  EPX73650.1 1566 PGVGKTSLISALAR 1579
                  59999999998887 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0       0.3        93      22      49 ..     150     177 ..     125     185 .. 0.79
   2 !    8.4   0.0    0.0063         2      18      51 ..     459     494 ..     439     501 .. 0.78
   3 ?   -1.1   0.0       5.2   1.6e+03      13      41 ..     884     911 ..     873     922 .. 0.76
   4 ?    6.2   0.0      0.03       9.3      21      53 ..    1171    1214 ..    1121    1222 .. 0.70
   5 ?   -1.8   0.0       8.5   2.7e+03      22      46 ..    1555    1579 ..    1539    1581 .. 0.78

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.3
                 .TTSEEEEEESTTSTHHHHHHHHHHHH- CS
      ResIII  22 krdkrglikmaTGtGKTlvaaklierll 49 
                  r++ +l++ + G+GKT+ ++++++ l 
  EPX73650.1 150 VRKQPLLLAGPEGMGKTYFITQIAALLG 177
                 6788999**************9998775 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.0063
                 .......TTSEEEEEESTTSTHHHHHHHHHHHH-S. CS
      ResIII  18 klks..krdkrglikmaTGtGKTlvaaklierllkk 51 
                 k++   + ++ +l++ +TGtGKT +   l+  l +k
  EPX73650.1 459 KISVavQTNEPLLLVGETGTGKTTTVQLLANLLGQK 494
                 33334478999*************998887777665 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 5.2
                 HHHT......TTSEEEEEESTTSTHHHHH CS
      ResIII  13 enlleklkskrdkrglikmaTGtGKTlva 41 
                  n+  + + +r   +li+ +T +GKT ++
  EPX73650.1 884 LNITRACS-TRMFPILIQGPTSSGKTSMI 911
                 34444454.78889************886 PP

  == domain 4  score: 6.2 bits;  conditional E-value: 0.03
                  .............TTSEEEEEESTTSTHHHHHHHHHHHH-S... CS
      ResIII   21 s...........krdkrglikmaTGtGKTlvaaklierllkkgk 53  
                              + ++ +l++  TG+GKT v+  l+e l+k+ +
  EPX73650.1 1171 MirlfslvwhclQAKEPVLLVGDTGCGKTTVCQVLAECLSKQLH 1214
                  055555555555678899**************999999998876 PP

  == domain 5  score: -1.8 bits;  conditional E-value: 8.5
                  .TTSEEEEEESTTSTHHHHHHHHHH CS
      ResIII   22 krdkrglikmaTGtGKTlvaaklie 46  
                  + +k +l++   G+GKT ++ +l++
  EPX73650.1 1555 QVRKPILLEGSPGVGKTSLISALAR 1579
                  4688999**********99887776 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.72   2.3e+02      33      55 ..     150     172 ..     136     180 .. 0.83
   2 ?    3.1   0.0      0.18        56      36      54 ..     468     486 ..     446     502 .. 0.76
   3 ?    4.6   0.0     0.062        19      31      56 ..     890     915 ..     878     931 .. 0.81
   4 ?    5.8   0.0     0.026       8.3      37      78 ..    1187    1233 ..    1171    1267 .. 0.69
   5 ?   -1.1   0.0       3.3   1.1e+03      38      53 ..    1870    1885 ..    1851    1910 .. 0.82

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.72
        TniB  33 krmpnlllvGdsnnGKtmivekF 55 
                  r + lll+G+  +GKt  + + 
  EPX73650.1 150 VRKQPLLLAGPEGMGKTYFITQI 172
                 57789************998875 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.18
        TniB  36 pnlllvGdsnnGKtmivek 54 
                 + lllvG++ +GKt+ v+ 
  EPX73650.1 468 EPLLLVGETGTGKTTTVQL 486
                 469************9975 PP

  == domain 3  score: 4.6 bits;  conditional E-value: 0.062
        TniB  31 krkrmpnlllvGdsnnGKtmivekFa 56 
                  ++rm  +l+ G++  GKt+++e  a
  EPX73650.1 890 CSTRMFPILIQGPTSSGKTSMIEYIA 915
                 479******************99766 PP

  == domain 4  score: 5.8 bits;  conditional E-value: 0.026
        TniB   37 nlllvGdsnnGKtmivekFarlhppe.....kdedaekvpvlvvqap 78  
                   +llvGd+ +GKt++++  a+  +++      ++d+e+ +++ +q p
  EPX73650.1 1187 PVLLVGDTGCGKTTVCQVLAECLSKQlhivnAHQDTENGDIIGAQRP 1233
                  589************98766433222111114566666666666655 PP

  == domain 5  score: -1.1 bits;  conditional E-value: 3.3
        TniB   38 lllvGdsnnGKtmive 53  
                  ++lvG+s+ GKt  ++
  EPX73650.1 1870 CILVGPSASGKTRTIR 1885
                  5789********9887 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       4.4   1.4e+03       4      26 ..     157     180 ..     155     188 .. 0.83
   2 ?    4.9   0.2      0.09        28       4      23 ..     472     492 ..     470     503 .. 0.80
   3 ?    4.5   0.0      0.12        37       2      27 ..     897     923 ..     896     950 .. 0.76
   4 ?    3.2   0.0      0.31        97       2      21 ..    1188    1207 ..    1187    1222 .. 0.84
   5 !   12.0   0.0   0.00059      0.19       2      27 ..    1560    1586 ..    1559    1590 .. 0.91
   6 ?    1.8   0.0      0.82   2.6e+02       3      23 ..    1871    1892 ..    1870    1915 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 4.4
      AAA_28   4 itGgestGKTtlleaLaar.gypv 26 
                 + G+e+ GKT  + ++aa  g ++
  EPX73650.1 157 LAGPEGMGKTYFITQIAALlGQRI 180
                 78************9998666555 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.09
      AAA_28   4 itGgestGKTtlleaLaar.g 23 
                 ++G  +tGKTt+++ La+  g
  EPX73650.1 472 LVGETGTGKTTTVQLLANLlG 492
                 78889************8654 PP

  == domain 3  score: 4.5 bits;  conditional E-value: 0.12
      AAA_28   2 ivitGgestGKTtlleaLa.argypvv 27 
                 i i G+ s+GKT+++e +a ++g++ v
  EPX73650.1 897 ILIQGPTSSGKTSMIEYIAgKTGHKFV 923
                 7899***************63355544 PP

  == domain 4  score: 3.2 bits;  conditional E-value: 0.31
      AAA_28    2 ivitGgestGKTtlleaLaa 21  
                  + ++G  ++GKTt+++ La+
  EPX73650.1 1188 VLLVGDTGCGKTTVCQVLAE 1207
                  6789999**********997 PP

  == domain 5  score: 12.0 bits;  conditional E-value: 0.00059
      AAA_28    2 ivitGgestGKTtlleaLaar.gypvv 27  
                  i + G ++ GKT+l++aLa++ gyp +
  EPX73650.1 1560 ILLEGSPGVGKTSLISALAREcGYPLI 1586
                  7899***************888*9976 PP

  == domain 6  score: 1.8 bits;  conditional E-value: 0.82
      AAA_28    3 vitGgestGKTtlleaLaar.g 23  
                  +++G++ +GKT +++ Laa  g
  EPX73650.1 1871 ILVGPSASGKTRTIRLLAAVcG 1892
                  689***************8644 PP

>> AAA_8  P-loop containing dynein motor region D4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       7.1   2.2e+03      26      60 ..     154     188 ..     132     192 .. 0.72
   2 !    7.4   0.1    0.0079       2.5      22      62 ..     465     505 ..     449     511 .. 0.85
   3 ?   -1.7   0.0       4.6   1.5e+03      11      66 ..     881     936 ..     875     940 .. 0.88
   4 ?    0.3   0.0       1.1   3.6e+02      27      51 ..    1188    1212 ..    1181    1227 .. 0.73
   5 ?   -1.6   0.0       4.2   1.3e+03      14      62 ..    1548    1595 ..    1544    1601 .. 0.80
   6 ?    4.0   0.0     0.084        26      27      64 ..    1870    1907 ..    1864    1947 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 7.1
       AAA_8  26 haLlvGvgGsGrqsltkLAafiaelelfqievtkk 60 
                  +Ll G +G G+   ++  a ++++++++i++t +
  EPX73650.1 154 PLLLAGPEGMGKTYFITQIAALLGQRIVRIHLTDS 188
                 58999*******97655555567899999998865 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0079
       AAA_8  22 qprghaLlvGvgGsGrqsltkLAafiaelelfqievtkkyk 62 
                 q +  +LlvG  G+G+ + ++L a ++++++  i+++++ +
  EPX73650.1 465 QTNEPLLLVGETGTGKTTTVQLLANLLGQKVTVINMSQQTE 505
                 555668****************************9998866 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 4.6
       AAA_8  11 ehlarilRvlrqprghaLlvGvgGsGrqsltkLAafiaelelfqievtkkykekef 66 
                 + l+ i+R  ++    +L+ G   sG+ s+++  a  +++++++i+ +++ + +e+
  EPX73650.1 881 KNLLNITRACSTRMFPILIQGPTSSGKTSMIEYIAGKTGHKFVRINNHEHTDLQEY 936
                 67889999999999999**************9999999999999999998888776 PP

  == domain 4  score: 0.3 bits;  conditional E-value: 1.1
       AAA_8   27 aLlvGvgGsGrqsltkLAafiaele 51  
                  +LlvG  G+G+ +++++ a  ++ +
  EPX73650.1 1188 VLLVGDTGCGKTTVCQVLAECLSKQ 1212
                  89***********998655444444 PP

  == domain 5  score: -1.6 bits;  conditional E-value: 4.2
       AAA_8   14 arilRvlrqprghaLlvGvgGsGrqsltkLAafiaelelfqievtkkyk 62  
                  a+++R l+  r  +Ll G  G G+ sl++  a  +++ l++i+++ + +
  EPX73650.1 1548 AKVVRALQV-RKPILLEGSPGVGKTSLISALARECGYPLIRINLSDQTD 1595
                  577777765.4568999**********9888888999999999887655 PP

  == domain 6  score: 4.0 bits;  conditional E-value: 0.084
       AAA_8   27 aLlvGvgGsGrqsltkLAafiaelelfqievtkkykek 64  
                  ++lvG   sG+   ++L a +++++l ++ ++++ ++ 
  EPX73650.1 1870 CILVGPSASGKTRTIRLLAAVCGVDLKEMAINSEIDTM 1907
                  79*****************************9998865 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.2      0.34   1.1e+02       3      34 ..     471     505 ..     470     519 .. 0.80
   2 ?    2.9   0.0      0.34   1.1e+02       2      32 ..     897     931 ..     896     950 .. 0.76
   3 ?    1.7   0.0      0.82   2.6e+02       2      22 ..    1188    1208 ..    1187    1235 .. 0.74
   4 ?    6.2   0.0     0.033        10       3      22 ..    1561    1580 ..    1559    1594 .. 0.85

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.34
                 EEEESTTSSHHHHHHHHHT...STEEESSSTTSSS CS
    MMR_HSR1   3 aivGrpNvGKStLinaltg...ekaivsdkpgtTr 34 
                 ++vG + +GK+t ++ l +   +k+ v ++ + T 
  EPX73650.1 471 LLVGETGTGKTTTVQLLANllgQKVTVINMSQQTE 505
                 68**********88888653336888888888775 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.34
                 EEEEESTTSSHHHHHHHHHTS....TEEESSSTTS CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltge....kaivsdkpgt 32 
                 ++i G + +GK+++i  + g+     ++++++  t
  EPX73650.1 897 ILIQGPTSSGKTSMIEYIAGKtghkFVRINNHEHT 931
                 6799**************99744323566666555 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.82
                  EEEEESTTSSHHHHHHHHHTS CS
    MMR_HSR1    2 vaivGrpNvGKStLinaltge 22  
                  v++vG +  GK+t+ + l + 
  EPX73650.1 1188 VLLVGDTGCGKTTVCQVLAEC 1208
                  789************999874 PP

  == domain 4  score: 6.2 bits;  conditional E-value: 0.033
                  EEEESTTSSHHHHHHHHHTS CS
    MMR_HSR1    3 aivGrpNvGKStLinaltge 22  
                  ++ G p vGK++Li+al +e
  EPX73650.1 1561 LLEGSPGVGKTSLISALARE 1580
                  6779*************875 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0      0.18        58       3      28 ..     156     181 ..     154     184 .. 0.85
   2 ?    5.4   0.2      0.05        16       3      29 ..     471     496 ..     469     514 .. 0.84
   3 ?    5.3   0.0     0.054        17       2      26 ..    1188    1212 ..    1187    1221 .. 0.86
   4 ?    4.3   0.0      0.11        35       2      23 ..    1560    1581 ..    1559    1586 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.18
                 EEE--TTSSHHHHHHHHHHHH...GG CS
    NTPase_1   3 fiTGppGvGKtTlvkkvlellkssgv 28 
                 ++ Gp G+GKt ++ +++ ll ++ v
  EPX73650.1 156 LLAGPEGMGKTYFITQIAALLGQRIV 181
                 799****************9977655 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.05
                 EEE--TTSSHHHHHHHHHHHH...GGG CS
    NTPase_1   3 fiTGppGvGKtTlvkkvlellkssgvk 29 
                 ++ G+ G+GKtT v+ +++ll ++ v+
  EPX73650.1 471 LLVGETGTGKTTTVQLLANLLGQK-VT 496
                 688****************99443.44 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.054
                  EEEE--TTSSHHHHHHHHHHHH... CS
    NTPase_1    2 vfiTGppGvGKtTlvkkvlellkss 26  
                  v++ G  G GKtT+++ ++e l+++
  EPX73650.1 1188 VLLVGDTGCGKTTVCQVLAECLSKQ 1212
                  6789***************999654 PP

  == domain 4  score: 4.3 bits;  conditional E-value: 0.11
                  EEEE--TTSSHHHHHHHHHHHH CS
    NTPase_1    2 vfiTGppGvGKtTlvkkvlell 23  
                  +++ G+pGvGKt l++ +++++
  EPX73650.1 1560 ILLEGSPGVGKTSLISALAREC 1581
                  6789***********9999876 PP

>> VWA  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   1.1   4.4e-06    0.0014       2     165 ..    4521    4686 ..    4520    4694 .. 0.76

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 4.4e-06
                  EEEEEE-STTSCHHHHH.HHHHHHHHHHHHHTBTTTTEEEEEEEESSSEEEEEETTSHCHHHHHHHHHHTGSGGGGSSC-HHHHHHHHHHHHHHHHG CS
         VWA    2 ivfvlDgSgsmgeenfe.kvkefikklveklevgpegtrvglvqfssevktefslndysskeellsalnnlkysgggttntgkalkyaleklfkssa 97  
                  +++++D S+sm+e++ +  ++e +  + ++l+   e  ++++++f++e++   ++++  s e  ++  ++++++ +gt+ + + +++ ++ lf+ + 
  EPX73650.1 4521 VMIAIDDSKSMSESKSTkLALETLALVTKSLS-MLEVGQISVMKFGDEPELLHPFDKPFSSEVGADMFSHFSFEQSGTN-VLSLTDASMR-LFNYAG 4614
                  79*********888888788999999999999.556678******************7665666666777788888888.5444444444.555544 PP

                  T.....SSTTSEEEEEEEESS--CS.SHTHHHHHHHHGCTEEEEEEEESSSHHHHHHHHHSSSSCHHCEEEESS CS
         VWA   98 g.....aRenakkviilltdGksnd.gdpkeaaneakeqgikvfavGvgnadekelLnkiasepgeghvftvtd 165 
                        ++++ +++ i+++dG  +d + +++ +++a+e+++ ++ +  +n+++ ++   +   ++  h+ t++d
  EPX73650.1 4615 TnlqvrNKTDLRQLEIIISDGICEDhDTIRRILRRAQEEKVMIVFIILDNVNDMKKSSVL-DINK-VHYVTKED 4686
                  447855555**************9966*****************9999888887733333.3333.56666666 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1       6.3     2e+03       2      27 ..     474     501 ..     473     504 .. 0.77
   2 ?    5.4   0.0     0.075        24       2      21 ..    1192    1213 ..    1191    1303 .. 0.79
   3 ?    6.3   0.0     0.039        12       2      24 ..    1564    1586 ..    1563    1592 .. 0.92
   4 ?    3.6   1.8      0.26        80      17      69 ..    4274    4328 ..    4263    4352 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 6.3
                 E-TTSSHHHHHHHHHHHH..TEEEEEHH CS
      AAA_17   2 GgPGsGKgtqceklveky..gfthlsaG 27 
                 G  G GK+t ++ l+  +  ++t+++++
  EPX73650.1 474 GETGTGKTTTVQLLANLLgqKVTVINMS 501
                 778********99998884456677765 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.075
                  E-TTSSHHHHHHHHHHHH..TE CS
      AAA_17    2 GgPGsGKgtqceklveky..gf 21  
                  G  G+GK+t+c+ l+e +  ++
  EPX73650.1 1192 GDTGCGKTTVCQVLAECLskQL 1213
                  667***********99764434 PP

  == domain 3  score: 6.3 bits;  conditional E-value: 0.039
                  E-TTSSHHHHHHHHHHHHTEEEE CS
      AAA_17    2 GgPGsGKgtqceklvekygfthl 24  
                  G PG+GK+ +++ l+++ g++ +
  EPX73650.1 1564 GSPGVGKTSLISALARECGYPLI 1586
                  88******************987 PP

  == domain 4  score: 3.6 bits;  conditional E-value: 0.26
                  HHHTEEEEEHHHHHHHHHHTTTS.HSSHHHHCTSHHHHHHHHHHHHH.HHHHHHH CS
      AAA_17   17 ekygfthlsaGdllreeakrggl.akardemrklpleekkelqkeaa.ekiaeea 69  
                  e  + ++ s Gd lre ++ ++  + + ++m+k+  +++k +++    ++iae++
  EPX73650.1 4274 ESADKQYQSLGDQLREWQRARQIqEHQTEDMEKEADNQQKNIDDATDfAHIAEDE 4328
                  455778889************9955567889999999999888776524555544 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.76   2.4e+02      52      83 ..     154     185 ..     149     189 .. 0.85
   2 ?    2.0   0.0      0.31        97      52      84 ..     469     501 ..     456     509 .. 0.87
   3 ?   -1.6   0.0       3.8   1.2e+03      53      76 ..     897     920 ..     886     929 .. 0.79
   4 ?    1.9   0.0      0.32     1e+02      51      81 ..    1186    1216 ..    1174    1222 .. 0.86
   5 ?    5.1   0.0     0.034        11      43      78 ..    1551    1583 ..    1542    1594 .. 0.80

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.76
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  52 avLlaGpsgtGktalaiaiskelgedvpfval 83 
                  +LlaGp+g Gkt     i+  lg+ +  ++l
  EPX73650.1 154 PLLLAGPEGMGKTYFITQIAALLGQRIVRIHL 185
                 58*******************99998866655 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.31
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  52 avLlaGpsgtGktalaiaiskelgedvpfvals 84 
                  +Ll+G++gtGkt     +++ lg++v  + +s
  EPX73650.1 469 PLLLVGETGTGKTTTVQLLANLLGQKVTVINMS 501
                 589************999*******99988776 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 3.8
                 XXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  53 vLlaGpsgtGktalaiaiskelge 76 
                 +L++Gp+++Gkt++   i+ + g+
  EPX73650.1 897 ILIQGPTSSGKTSMIEYIAGKTGH 920
                 9***********998777776664 PP

  == domain 4  score: 1.9 bits;  conditional E-value: 0.32
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49   51 ravLlaGpsgtGktalaiaiskelgedvpfv 81  
                    vLl+G++g Gkt +   +++ l+++++ v
  EPX73650.1 1186 EPVLLVGDTGCGKTTVCQVLAECLSKQLHIV 1216
                  569*******************999998876 PP

  == domain 5  score: 5.1 bits;  conditional E-value: 0.034
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49   43 ikekklaGravLlaGpsgtGktalaiaiskelgedv 78  
                  +++ ++  + +Ll G +g Gkt+l  a+++e g   
  EPX73650.1 1551 VRALQVR-KPILLEGSPGVGKTSLISALARECG--Y 1583
                  5555555.89*********************98..3 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       5.9   1.8e+03       4      23 ..     153     172 ..     151     178 .. 0.86
   2 !    9.4   0.2    0.0021      0.66       5      77 ..     469     544 ..     465     556 .. 0.83
   3 ?    1.6   0.0      0.53   1.7e+02       6      26 ..     897     917 ..     892     936 .. 0.82
   4 ?    1.3   0.0      0.64     2e+02       3      25 ..    1185    1207 ..    1183    1223 .. 0.83
   5 ?   -1.4   0.0       4.2   1.3e+03       3      25 ..    1557    1579 ..    1555    1585 .. 0.86
   6 ?    0.7   0.0         1   3.1e+02       6      24 ..    1870    1888 ..    1865    1905 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 5.9
                 -EEEEE-STTSSHHHHHHHH CS
       SRPRB   4 pavllvGlsdsGKTslftrL 23 
                 + +ll+G+   GKT ++t++
  EPX73650.1 153 QPLLLAGPEGMGKTYFITQI 172
                 5689**********999986 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.0021
                 EEEEE-STTSSHHH...HHHHHHHSS---B---SS-EEETTG...GGTT-SEEEETT-GCCSHHHHHHHHHHGGEE CS
       SRPRB   5 avllvGlsdsGKTs...lftrLttdsvkktvtSqessaalkvksekgskltliDfPGheklrqklleklkaksslk 77 
                  +llvG + +GKT+   l+  L+ ++v+   +Sq++++++ + + k  ++t + +P he++ + + +++  k+++k
  EPX73650.1 469 PLLLVGETGTGKTTtvqLLANLLGQKVTVINMSQQTESSDMLGGYKPINITTLGLPLHEEFMSLFETTFSVKKNMK 544
                 589**********8333555566679999999**999999999******************998888877777766 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.53
                 EEEE-STTSSHHHHHHHHHHS CS
       SRPRB   6 vllvGlsdsGKTslftrLttd 26 
                 +l+ G++ sGKTs+++ +  +
  EPX73650.1 897 ILIQGPTSSGKTSMIEYIAGK 917
                 89***********99877655 PP

  == domain 4  score: 1.3 bits;  conditional E-value: 0.64
                  --EEEEE-STTSSHHHHHHHHHH CS
       SRPRB    3 kpavllvGlsdsGKTslftrLtt 25  
                  k+ vllvG + +GKT++ + L +
  EPX73650.1 1185 KEPVLLVGDTGCGKTTVCQVLAE 1207
                  5679************9888765 PP

  == domain 5  score: -1.4 bits;  conditional E-value: 4.2
                  --EEEEE-STTSSHHHHHHHHHH CS
       SRPRB    3 kpavllvGlsdsGKTslftrLtt 25  
                  ++ +ll G    GKTsl+  L  
  EPX73650.1 1557 RKPILLEGSPGVGKTSLISALAR 1579
                  56799*************99875 PP

  == domain 6  score: 0.7 bits;  conditional E-value: 1
                  EEEE-STTSSHHHHHHHHH CS
       SRPRB    6 vllvGlsdsGKTslftrLt 24  
                   +lvG+s sGKT  + +L 
  EPX73650.1 1870 CILVGPSASGKTRTIRLLA 1888
                  69**********9888775 PP

>> VWA_2  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.1    0.0001     0.033       1      57 [.    4521    4576 ..    4521    4602 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 0.0001
       VWA_2    1 lvfvlDtSgSmrngdygptrleaakdaveallkslpgd.rvglvtfsdgpevlipltk 57  
                  +++ +D S+Sm++++   t+l+    a+ + + s+ ++ +++++ f+d+pe+l p++k
  EPX73650.1 4521 VMIAIDDSKSMSESK--STKLALETLALVTKSLSMLEVgQISVMKFGDEPELLHPFDK 4576
                  79***********94..4444444444433333444666**************99974 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.1      0.32     1e+02       2      20 ..     470     488 ..     469     512 .. 0.83
   2 ?   -0.1   0.0       3.2     1e+03       2      22 ..     897     917 ..     897     925 .. 0.81
   3 ?    5.0   0.0     0.086        27       2      21 ..    1188    1207 ..    1187    1229 .. 0.85
   4 ?    3.1   0.0      0.32     1e+02       2      20 ..    1560    1578 ..    1559    1583 .. 0.85
   5 ?   -1.4   0.0       8.4   2.6e+03       3      17 ..    1871    1885 ..    1870    1900 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.32
                 EEEESSTTSSHHHHHHCHC CS
         Roc   2 vvlvGdsgvGKtsllkrfv 20 
                 ++lvG++g+GKt+ ++ + 
  EPX73650.1 470 LLLVGETGTGKTTTVQLLA 488
                 689*********9887655 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 3.2
                 EEEESSTTSSHHHHHHCHCT- CS
         Roc   2 vvlvGdsgvGKtsllkrfved 22 
                 +++ G +++GKts+++ +  +
  EPX73650.1 897 ILIQGPTSSGKTSMIEYIAGK 917
                 56779**********987665 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.086
                  EEEESSTTSSHHHHHHCHCT CS
         Roc    2 vvlvGdsgvGKtsllkrfve 21  
                  v+lvGd+g GKt+ ++ + e
  EPX73650.1 1188 VLLVGDTGCGKTTVCQVLAE 1207
                  79***********9998775 PP

  == domain 4  score: 3.1 bits;  conditional E-value: 0.32
                  EEEESSTTSSHHHHHHCHC CS
         Roc    2 vvlvGdsgvGKtsllkrfv 20  
                  ++l G  gvGKtsl++ + 
  EPX73650.1 1560 ILLEGSPGVGKTSLISALA 1578
                  56779**********9886 PP

  == domain 5  score: -1.4 bits;  conditional E-value: 8.4
                  EEESSTTSSHHHHHH CS
         Roc    3 vlvGdsgvGKtsllk 17  
                  +lvG s++GKt  ++
  EPX73650.1 1871 ILVGPSASGKTRTIR 1885
                  79*********8665 PP

>> tRNA_lig_kinase  tRNA ligase kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.1      0.21        67       5      34 ..     473     500 ..     470     511 .. 0.72
   2 ?    7.8   0.0      0.01       3.1       6      33 ..    1192    1219 ..    1188    1280 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.21
                      E--TTSSHHHHHHHHHHH-TTSEEEEGGGS CS
  tRNA_lig_kinase   5 iatiGCGkttvaltlenlfgeWghvqnDni 34 
                      +   G Gktt+ + l nl g+   v   n+
       EPX73650.1 473 VGETGTGKTTTVQLLANLLGQKVTV--INM 500
                      56679***************64433..344 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.01
                       --TTSSHHHHHHHHHHH-TTSEEEEGGG CS
  tRNA_lig_kinase    6 atiGCGkttvaltlenlfgeWghvqnDn 33  
                          GCGkttv ++l +   +  h++n  
       EPX73650.1 1192 GDTGCGKTTVCQVLAECLSKQLHIVNAH 1219
                       557*************999988888754 PP

>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0       3.7   1.2e+03       2      22 ..     158     178 ..     157     185 .. 0.84
   2 ?    4.5   0.2     0.081        26       2      32 ..     473     500 ..     472     506 .. 0.90
   3 ?    7.5   0.0      0.01       3.1       2      31 ..    1191    1217 ..    1190    1222 .. 0.92
   4 ?    0.1   0.0       1.9   5.8e+02       3      19 ..    1564    1580 ..    1563    1592 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 3.7
  ATP_bind_1   2 vGpaGsGKttfvgalseilel 22 
                 +Gp G GKt+f+ +++ +l +
  EPX73650.1 158 AGPEGMGKTYFITQIAALLGQ 178
                 79***********99887765 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.081
  ATP_bind_1   2 vGpaGsGKttfvgalseilelrgrsvavvNL 32 
                 vG  G GKtt v+ l+++l ++   v v+N+
  EPX73650.1 473 VGETGTGKTTTVQLLANLLGQK---VTVINM 500
                 899************9999877...999998 PP

  == domain 3  score: 7.5 bits;  conditional E-value: 0.01
  ATP_bind_1    2 vGpaGsGKttfvgalseilelrgrsvavvN 31  
                  vG  G GKtt ++ l+e l+++   +++vN
  EPX73650.1 1191 VGDTGCGKTTVCQVLAECLSKQ---LHIVN 1217
                  799****************988...99998 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 1.9
  ATP_bind_1    3 GpaGsGKttfvgalsei 19  
                  G +G+GKt++++al+  
  EPX73650.1 1564 GSPGVGKTSLISALARE 1580
                  899********998653 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1       9.7   3.1e+03       7      26 ..     476     496 ..     472     506 .. 0.74
   2 ?   -2.2   0.0       8.6   2.7e+03       3      76 ..     899     975 ..     897     984 .. 0.68
   3 ?    2.6   0.0      0.31        98       7      21 ..    1194    1208 ..    1189    1250 .. 0.74
   4 ?    5.7   0.0     0.034        11       2      25 ..    1561    1587 ..    1560    1645 .. 0.71

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 9.7
  Viral_helicase1   7 pGcGKStlirkllrts.lilt 26 
                       G GK+t ++ l++    ++t
       EPX73650.1 476 TGTGKTTTVQLLANLLgQKVT 496
                      69*******999998554444 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 8.6
  Viral_helicase1   3 vhGvpGcGKStlirkllrts..liltvnrptaelltegk.pklpnlsvrtvdsflmalvks.tkgkililDEylllha 76 
                      ++G   +GK+++i  ++ +     +++n+    +l e + +++++++++ v + +  lv+  ++g  ++lDE  l+++
       EPX73650.1 899 IQGPTSSGKTSMIEYIAGKTghKFVRINNHEHTDLQEYLgSYVTDDKGSLVFK-EGILVEAlKNGYWIVLDELNLAPT 975
                      5555669**********998965555666666666666688888888888776.333333346788888888877775 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.31
  Viral_helicase1    7 pGcGKStlirkllrt 21  
                        GcGK+t+++ l++ 
       EPX73650.1 1194 TGCGKTTVCQVLAEC 1208
                       6*******9998854 PP

  == domain 4  score: 5.7 bits;  conditional E-value: 0.034
  Viral_helicase1    2 vvhGvpGcGKStlirkllrts...lil 25  
                       +  G pG GK++li  l+r++   li 
       EPX73650.1 1561 LLEGSPGVGKTSLISALARECgypLIR 1587
                       67899***************9865332 PP

>> dNK  Deoxynucleoside kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.1      0.26        81       5      26 ..     474     495 ..     470     518 .. 0.85
   2 ?    2.9   0.0      0.27        85       1      44 [.     897     939 ..     897     972 .. 0.77
   3 ?    1.4   0.0       0.8   2.5e+02       5      23 ..    1192    1210 ..    1188    1227 .. 0.78
   4 ?    5.1   0.0     0.059        19       1      27 [.    1560    1586 ..    1560    1598 .. 0.90

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.26
                 ESTTSSHHHHHHHHHCCSTCEE CS
         dNK   5 GnIgaGKstlvklLskklgvkv 26 
                 G  g GK+t v+lL++ lg kv
  EPX73650.1 474 GETGTGKTTTVQLLANLLGQKV 495
                 899**************99665 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.27
                 EEEEESTTSSHHHHHHHHHCCSTCEEEE-HHHHCCSSSSHHHHH CS
         dNK   1 ivveGnIgaGKstlvklLskklgvkvfeEpvdkwtnvqknlLek 44 
                 i ++G+ ++GK+++++ ++ k+g k+++  + +   + +++L  
  EPX73650.1 897 ILIQGPTSSGKTSMIEYIAGKTGHKFVRINNHEH-TDLQEYLGS 939
                 789*******************998887666666.334455555 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.8
                  ESTTSSHHHHHHHHHCCST CS
         dNK    5 GnIgaGKstlvklLskklg 23  
                  G  g+GK+t+ ++L++ l 
  EPX73650.1 1192 GDTGCGKTTVCQVLAECLS 1210
                  889*******999987664 PP

  == domain 4  score: 5.1 bits;  conditional E-value: 0.059
                  EEEEESTTSSHHHHHHHHHCCSTCEEE CS
         dNK    1 ivveGnIgaGKstlvklLskklgvkvf 27  
                  i +eG  g+GK++l++ L++++g++ +
  EPX73650.1 1560 ILLEGSPGVGKTSLISALARECGYPLI 1586
                  679*******************99876 PP

>> AAA_31  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.1     0.013       4.1      12      50 ..     477     512 ..     474     554 .. 0.79
   2 ?    1.6   0.0      0.71   2.2e+02      12      29 ..    1195    1212 ..    1192    1271 .. 0.90

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.013
      AAA_31  12 GvGKTTtsvnlaaalaklgkkvLlvDlDpQanattglgi 50 
                 G GKTTt+  la  l   g+kv ++++  Q+ ++  lg 
  EPX73650.1 477 GTGKTTTVQLLANLL---GQKVTVINMSQQTESSDMLGG 512
                 99*****99999887...89************9997764 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.71
      AAA_31   12 GvGKTTtsvnlaaalakl 29  
                  G GKTT +  la++l+k+
  EPX73650.1 1195 GCGKTTVCQVLAECLSKQ 1212
                  99*************976 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       3.9   1.2e+03      18      38 ..     151     171 ..     149     174 .. 0.85
   2 ?    2.0   0.1      0.34   1.1e+02      19      36 ..     467     484 ..     457     500 .. 0.86
   3 ?    3.7   0.0      0.11        34      18      37 ..    1184    1203 ..    1172    1293 .. 0.78
   4 ?   -1.1   0.0       3.1   9.6e+02      17      35 ..    1555    1573 ..    1549    1582 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 3.9
      ATPase  18 egrvvlitGepGtGKtifalq 38 
                 +++  l++G  G GKt f  q
  EPX73650.1 151 RKQPLLLAGPEGMGKTYFITQ 171
                 67889***********99776 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.34
      ATPase  19 grvvlitGepGtGKtifa 36 
                 ++  l++Ge+GtGKt+ +
  EPX73650.1 467 NEPLLLVGETGTGKTTTV 484
                 66789**********976 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.11
      ATPase   18 egrvvlitGepGtGKtifal 37  
                   ++ vl++G++G+GKt++++
  EPX73650.1 1184 AKEPVLLVGDTGCGKTTVCQ 1203
                  67889***********9886 PP

  == domain 4  score: -1.1 bits;  conditional E-value: 3.1
      ATPase   17 pegrvvlitGepGtGKtif 35  
                    ++ +l+ G+pG GKt +
  EPX73650.1 1555 QVRKPILLEGSPGVGKTSL 1573
                  567899**********965 PP

>> IPT  Isopentenyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0      0.45   1.4e+02       5      34 ..     471     500 ..     468     523 .. 0.87
   2 ?    2.8   0.0      0.21        67       5      30 ..     898     923 ..     895     927 .. 0.89
   3 ?    1.9   0.0      0.39   1.2e+02       5      31 ..    1561    1587 ..    1558    1592 .. 0.90

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.45
         IPT   5 lifGatttGKtaeaiklaketgapvivlDR 34 
                 l++G t+tGKt +   la+  g  v v+  
  EPX73650.1 471 LLVGETGTGKTTTVQLLANLLGQKVTVINM 500
                 899**********9999*999998888765 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.21
         IPT   5 lifGatttGKtaeaiklaketgapvi 30 
                 li G+t++GKt++   +a +tg   +
  EPX73650.1 898 LIQGPTSSGKTSMIEYIAGKTGHKFV 923
                 899***************99998765 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.39
         IPT    5 lifGatttGKtaeaiklaketgapviv 31  
                  l+ G+ ++GKt+  ++la+e g+p+i 
  EPX73650.1 1561 LLEGSPGVGKTSLISALARECGYPLIR 1587
                  6679999*****************996 PP

>> MobB  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0      0.43   1.4e+02       3      30 ..     156     183 ..     155     190 .. 0.88
   2 ?    2.9   0.1       0.3        95       2      30 ..     470     497 ..     469     511 .. 0.68
   3 ?    2.3   0.0      0.46   1.4e+02       3      28 ..    1189    1214 ..    1188    1227 .. 0.80

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.43
        MobB   3 givgksgsGKTtLleklipelkarglrv 30 
                  ++g +g+GKT +++++ + l +r +r+
  EPX73650.1 156 LLAGPEGMGKTYFITQIAALLGQRIVRI 183
                 578999***************9998888 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.3
        MobB   2 lgivgksgsGKTtLleklipelkarglrv 30 
                 l +vg  g+GKTt ++ l + l ++ ++v
  EPX73650.1 470 LLLVGETGTGKTTTVQLLANLLGQK-VTV 497
                 5689*********997766666443.333 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.46
        MobB    3 givgksgsGKTtLleklipelkargl 28  
                   +vg  g+GKTt  + l ++l+++  
  EPX73650.1 1189 LLVGDTGCGKTTVCQVLAECLSKQLH 1214
                  589**********9999999887654 PP

>> Mur_ligase_M  Mur ligase middle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.6     0.042        13       2      31 ..     476     504 ..     476     535 .. 0.84
   2 ?    2.7   0.0      0.35   1.1e+02       6      31 ..    1197    1222 ..    1194    1252 .. 0.80

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.042
                   ESSS-HHHHHHHHHHHHHCTEEEEETTCSS CS
  Mur_ligase_M   2 TGtnGKTTtteliaailekagkvigtvgtt 31 
                   TGt GKTTt +l+a++l +++ vi + + t
    EPX73650.1 476 TGT-GKTTTVQLLANLLGQKVTVINMSQQT 504
                   565.**************998877766644 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.35
                    -HHHHHHHHHHHHHCTEEEEETTCSS CS
  Mur_ligase_M    6 GKTTtteliaailekagkvigtvgtt 31  
                    GKTT+ +++a++l+k+ +++   ++t
    EPX73650.1 1197 GKTTVCQVLAECLSKQLHIVNAHQDT 1222
                    9**************97766655533 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.1     0.028       8.7      38      59 ..     468     487 ..     454     495 .. 0.78
   2 ?    1.4   0.0      0.53   1.7e+02      35      59 ..    1183    1205 ..    1178    1209 .. 0.85
   3 ?   -2.2   0.0       6.9   2.2e+03      30      59 ..    1860    1887 ..    1850    1889 .. 0.82
   4 ?   -2.2   1.7       6.8   2.1e+03     100     166 ..    4271    4343 ..    4259    4350 .. 0.73

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.028
                   S-.SEEEE--TTSSHHHHHHHH CS
  FtsK_SpoIIIE  38 mashllvaGatgsGKStalntL 59 
                       ll++G tg+GK+t+++ L
    EPX73650.1 468 E--PLLLVGETGTGKTTTVQLL 487
                   3..49**************954 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.53
                    GGGS-.SEEEE--TTSSHHHHHHHH CS
  FtsK_SpoIIIE   35 lkkmashllvaGatgsGKStalntL 59  
                    ++k +  +l++G tg GK+t+ ++L
    EPX73650.1 1183 QAKEP--VLLVGDTGCGKTTVCQVL 1205
                    55666..9************99987 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 6.9
                    EEEEEGGGS-.SEEEE--TTSSHHHHHHHH CS
  FtsK_SpoIIIE   30 plvldlkkmashllvaGatgsGKStalntL 59  
                     +++  k+++   +++G + sGK+ +++ L
    EPX73650.1 1860 MITCINKNWP--CILVGPSASGKTRTIRLL 1887
                    5666678888..999*********999865 PP

  == domain 4  score: -2.2 bits;  conditional E-value: 6.8
                    -SHHHHHHHHHHHHHHHHHHH..HHHHHTT-SSHHHHHHHHHHHHHTT---B-TT-................. CS
  FtsK_SpoIIIE  100 tdperalraleeLvkemeery..alfreagvrsiaaydgeiaedpldifgdvflvlDnyddlaaene....ri 166 
                    +++e a +  + L ++++e +  + ++e++++++++  +  ++ ++d+  +  +  D+ +d +a ++    +i
    EPX73650.1 4271 EEAESADKQYQSLGDQLREWQraRQIQEHQTEDMEKEADNQQKNIDDATDFAHIAEDEEEDTQALGNadkeQI 4343
                    5666666677777777776444499***********8888888899999999999998777665444444555 PP

>> DUF853  Bacterial protein of unknown function (DUF853)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.2    0.0049       1.5      21      47 ..     467     493 ..     456     503 .. 0.81
   2 ?    5.3   0.0     0.019         6      25      49 ..    1189    1213 ..    1179    1263 .. 0.75

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0049
      DUF853  21 nrhGliaGatGtGktvtLqvlaeslse 47 
                 n   l+ G tGtGkt t+q+la+ l +
  EPX73650.1 467 NEPLLLVGETGTGKTTTVQLLANLLGQ 493
                 5556899***************98865 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.019
      DUF853   25 liaGatGtGktvtLqvlaeslseaG 49  
                  l+ G tG Gkt   qvlae ls++ 
  EPX73650.1 1189 LLVGDTGCGKTTVCQVLAECLSKQL 1213
                  789*******************974 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (4732 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1616  (0.0901333); expected 358.6 (0.02)
Passed bias filter:                      526  (0.0293379); expected 358.6 (0.02)
Passed Vit filter:                       156  (0.00870099); expected 17.9 (0.001)
Passed Fwd filter:                        78  (0.00435049); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              57  [number of targets reported over threshold]
# CPU time: 2.75u 0.37s 00:00:03.12 Elapsed: 00:00:00.68
# Mc/sec: 20915.86
//
Query:       EPX73651.1  [L=658]
Description: DNA polymerase alpha-associated DNA helicase A [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      2e-57  194.1   0.0    4.5e-57  192.9   0.0    1.6  1  AAA_12           AAA domain
      3e-56  191.1   0.0    1.9e-55  188.5   0.0    2.1  1  AAA_11           AAA domain
    1.7e-11   44.2   0.0      1e-09   38.4   0.0    2.6  1  AAA_30           AAA domain
    9.9e-09   35.7   0.0    9.8e-08   32.5   0.0    2.4  2  AAA_19           AAA domain
    1.8e-06   28.1   0.0      7e-06   26.1   0.0    1.9  1  ResIII           Type III restriction enzyme, res subunit
    3.5e-06   26.9   0.4       0.23   11.2   0.0    3.3  3  Viral_helicase1  Viral (Superfamily 1) RNA helicase
      3e-05   23.7   0.0    7.4e-05   22.4   0.0    1.8  1  UvrD-helicase    UvrD/REP helicase N-terminal domain
    9.1e-05   21.9   0.3    0.00075   18.8   0.3    2.2  1  DUF2075          Uncharacterized conserved protein (DUF2075)
    0.00019   21.7   0.2     0.0056   16.9   0.2    2.9  1  AAA_22           AAA domain
     0.0032   16.9   0.0        2.9    7.3   0.0    2.4  2  PhoH             PhoH-like protein
     0.0041   16.7   0.8      0.028   14.0   0.2    2.2  2  4HB_MCP_1        Four helix bundle sensory module for signal 
     0.0048   16.8   0.0       0.84    9.5   0.0    2.4  2  Helicase_RecD    Helicase
     0.0062   16.9   0.0      0.012   16.0   0.0    1.5  1  AAA_16           AAA ATPase domain
     0.0077   16.2   0.1        2.7    7.8   0.0    3.1  3  AAA_31           AAA domain
     0.0079   16.6   0.5       0.05   14.0   0.2    2.4  2  AAA              ATPase family associated with various cellul
  ------ inclusion threshold ------
      0.011   15.4   0.0       0.11   12.2   0.0    2.5  2  AAA_24           AAA domain
      0.013   15.2   0.0      0.044   13.5   0.0    1.8  2  IstB_IS21        IstB-like ATP binding protein
       0.03   14.2   0.5        1.4    8.8   0.0    2.6  2  NTPase_1         NTPase
      0.038   12.9   0.0      0.067   12.1   0.0    1.3  1  TrwB_AAD_bind    Type IV secretion-system coupling protein DN
      0.039   13.0   0.0      0.069   12.2   0.0    1.3  1  T2SSE            Type II/IV secretion system protein
      0.039   13.1   0.4        1.3    8.1   0.0    3.2  4  PIF1             PIF1-like helicase
      0.045   13.1   0.5        4.5    6.6   0.0    2.7  3  UvrD_C           UvrD-like helicase C-terminal domain
      0.047   14.4   0.7        1.8    9.4   0.2    3.4  4  PCB_OB           Penicillin-binding protein OB-like domain
      0.054   13.5   0.0       0.15   12.1   0.0    1.7  1  AAA_5            AAA domain (dynein-related subfamily)
      0.077   12.9   0.1        3.4    7.5   0.0    2.5  2  TK               Thymidine kinase
       0.13   12.2   0.0        2.7    7.9   0.0    2.3  2  Flavi_DEAD       Flavivirus DEAD domain
       0.16   12.1   0.0       0.37   11.0   0.0    1.6  1  AAA_33           AAA domain
       0.17   11.5   0.0        2.6    7.6   0.0    2.3  2  SRP54            SRP54-type protein, GTPase domain


Domain annotation for each model (and alignments):
>> AAA_12  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  192.9   0.0     7e-60   4.5e-57       4     198 ..     428     626 ..     426     627 .. 0.95

  Alignments for each domain:
  == domain 1  score: 192.9 bits;  conditional E-value: 7e-60
      AAA_12   4 Slferllkke.kekvvlLdtqYRmhpeIsrfpsklfYkgkLkdaesvkkrele...aqealeepleplvfidvekseeekekke.......ksyiNeeE 91 
                 S+ferllk + ++ + +L++qYRmh+ I +fps++fY+gkL++a+sv+kr l+     e++e + +p++f+d++++ +e+++k+       +s++N+ E
  EPX73651.1 428 SMFERLLKIQgDKVKCFLNVQYRMHELINKFPSNTFYDGKLTSAPSVAKRLLMhlpYVEETELTDAPIYFYDTDGNYHEDDDKDmgsalyqDSKSNKWE 526
                 9*******99889999**********************************999888888999999********999888888778999999******** PP

      AAA_12  92 aelvvklvekllkkgseeerkkigvitpYraqvellkkklkekeeeksekeievntvdgfQGrekdviilslVRsnekkeigflkderrlNValTRAks 190
                 a++v+++v +l+++g +e  ++ +++tpY+aqv l++++lk +  e     +e+++vd++QGrek++ii+slVRsn+ +e+gfl++++rlNVa+TR k+
  EPX73651.1 527 AQIVCHHVLELMNAGLKE--EDMAIVTPYNAQVALIRSMLKLRGIE-----VEMGSVDRVQGREKEAIIFSLVRSNDVREVGFLSEKKRLNVAITRPKR 618
                 ******************..9********************54443.....9*********************************************** PP

      AAA_12 191 kliivGnk 198
                 +l++vG+ 
  EPX73651.1 619 HLCVVGDG 626
                 ******85 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.5   0.0   2.9e-58   1.9e-55       2     256 ..     208     418 ..     207     421 .. 0.92

  Alignments for each domain:
  == domain 1  score: 188.5 bits;  conditional E-value: 2.9e-58
      AAA_11   2 lndsqreaiksalseseitliqGPPGtgKTktivellsqllsrrkseeeksakpriLvCapSNaAvDellerllrglldsegekykpkivRvgneeeri 100
                 lndsq+ea+++ l  +e++li+GPPGtgKT+t++e+++ql          ++++r+LvC+ SN +vD++++r++          y++ +vR+g+++ r 
  EPX73651.1 208 LNDSQKEAVRFSLGVRELALIHGPPGTGKTHTLIEVIRQL---------VNKGKRVLVCGASNLSVDNIVDRISI---------YGIPMVRLGHPA-RL 287
                 8***************************************.........799********************999.........************.9* PP

      AAA_11 101 seavksvsleekvekrlekeekaqlakeiskeleklakelrafeeeeekeklkkskekskskleqerrklkkerkelskeleeaeesleeevldeaeiv 199
                  ++v ++sl+   ++        +  + is+ +e++ +++                  +k k  +e+r++ k ++el+k++++ e++  +e+l+ ++iv
  EPX73651.1 288 LPSVLNHSLDFLSRSGNFG----EVINGISEDIEAELNKI------------------RKTKSGKEKREIFKHVRELRKDYRRYESQNVSECLKASDIV 364
                 ********99887777644....35555555555555555..................67788899999999999************************ PP

      AAA_11 200 ltTlsgagsklleklakkfdvviIDEAaqavEpstliPlrlgakkvvLvGDpkQLpa 256
                 ++Tl+gags++l++   kfdvviIDEA+qa+Ep+++i+l+ + kk++L+GD+ QL +
  EPX73651.1 365 FCTLHGAGSRQLRNE--KFDVVIIDEASQALEPQCWIALLGA-KKAILAGDHMQLSP 418
                 ***************..9*********************888.************98 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.4   0.0   1.6e-12     1e-09       2     130 ..     208     418 ..     207     421 .. 0.82

  Alignments for each domain:
  == domain 1  score: 38.4 bits;  conditional E-value: 1.6e-12
      AAA_30   2 lnaeQaaavealltsgdrvavltGpAGtGKttalkalreaweaaggrviglAptgkaAkvLae..........elgieastiakllkrlk......... 81 
                 ln++Q++av+  l+ ++ +a+++Gp+GtGKt++l ++ + + ++g+rv+++  ++   +++ +           lg +a+ + ++l+            
  EPX73651.1 208 LNDSQKEAVRFSLGVRE-LALIHGPPGTGKTHTLIEVIRQLVNKGKRVLVCGASNLSVDNIVDrisiygipmvRLGHPARLLPSVLNH-Sldflsrsgn 304
                 89*******99998886.*************999999888888999*************99973333333333444566666666633.2588888999 PP

      AAA_30  82 .....................................................................grarlepg.tllivDEagmvdtkqlaallk 110
                                                                                      + +  +++ +++i+DEa+ +   q    l 
  EPX73651.1 305 fgevingisedieaelnkirktksgkekreifkhvrelrkdyrryesqnvseclkasdivfctlhgagsR-QLRNEKfDVVIIDEASQALEPQCWIALL 402
                 999999999999999999999999999999999999999****************************743.3333447***********8888877776 PP

      AAA_30 111 aaekagakvilvGDerQlas 130
                  a+k     il+GD+ Ql++
  EPX73651.1 403 GAKK----AILAGDHMQLSP 418
                 6665....8*********86 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.5   0.0   1.5e-10   9.8e-08       1     142 [.     212     417 ..     212     421 .. 0.74
   2 ?   -0.1   0.0       1.6     1e+03     120     139 ..     608     627 ..     597     630 .. 0.81

  Alignments for each domain:
  == domain 1  score: 32.5 bits;  conditional E-value: 1.5e-10
      AAA_19   1 qreave..alkekvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAakelrerlaalgae............atTiHrlal........ 77 
                 q+eav+     +++ l+ ++pGtGKT++l ++++ lv+ g    +++l++   + +++++ +r++ +g +                    +        
  EPX73651.1 212 QKEAVRfsLGVRELALIHGPPGTGKTHTLIEVIRQLVNKG----KRVLVCGASNLSVDNIVDRISIYGIPmvrlghparllpS-------Vlnhsldfl 299
                 788885545567889999**********************....89******************9999997666666555552.......044555557 PP

      AAA_19  78 ..........................................................ldfddlltealelleeaeeekklqeee..llivDEfqdvde 116
                                                                           l++ d++   +  l+  + +++l++e+  ++i+DE+++  e
  EPX73651.1 300 srsgnfgevingisedieaelnkirktksgkekreifkhvrelrkdyrryesqnvsecLKASDIV---FCTLHG-AGSRQLRNEKfdVVIIDEASQALE 394
                 77888888888999999999999999999999999999999999877776666665555555555...333333.444555444448******998663 PP

      AAA_19 117 lqyrLlkallgekkklllvGDpdQli 142
                  q     allg kk  +l GD+ Ql 
  EPX73651.1 395 PQC--WIALLGAKK-AILAGDHMQLS 417
                 333..234554444.68899999986 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 1.6
      AAA_19 120 rLlkallgekkklllvGDpd 139
                 rL  a++ +k +l++vGD +
  EPX73651.1 608 RLNVAITRPKRHLCVVGDGN 627
                 566678888888******76 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.0   1.1e-08     7e-06      24     141 ..     223     389 ..     205     411 .. 0.69

  Alignments for each domain:
  == domain 1  score: 26.1 bits;  conditional E-value: 1.1e-08
                 TSEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSHHHHHHHHHHG........................GGGTGG..........GEEEESSS CS
      ResIII  24 dkrglikmaTGtGKTlvaaklierllkkgkeekflflvprkslleqtleef........................kkflseayke......igkkvsgd 92 
                 ++ +li+ + GtGKT +++++i++l +kgk  ++l+   ++  ++   +++                         +fls   ++      i+++    
  EPX73651.1 223 RELALIHGPPGTGKTHTLIEVIRQLVNKGK--RVLVCGASNLSVDNIVDRIsiygipmvrlghparllpsvlnhsLDFLSRSGNFgevingISED---- 315
                 456899**********************88..677766666666667777766666666667777777666666644444443323333333333.... PP

                 -B--...............-SEEEEEHHHHHHTH............................HHHTTT-SEEEEETG CS
      ResIII  93 kkka........kekdstnkkilvttiqsldadseee....................eeeseellrdrfdviiiDEa 141
                    +        k k+ ++k+ ++  + +l +d ++                        s +l++++fdv+iiDEa
  EPX73651.1 316 ---IeaelnkirKTKSGKEKREIFKHVRELRKDYRRYesqnvseclkasdivfctlhGAGSRQLRNEKFDVVIIDEA 389
                 ...333333336566666677777777777777755577788888888888888888788889*************9 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.1    0.0016         1       2      28 ..     227     251 ..     226     266 .. 0.82
   2 !   11.2   0.0   0.00035      0.23      59     118 ..     377     429 ..     331     487 .. 0.78
   3 ?    3.1   0.0       0.1        65     184     232 ..     572     622 ..     523     624 .. 0.76

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.0016
  Viral_helicase1   2 vvhGvpGcGKStlirkllrtsliltvn 28 
                      ++hG pG GK++ + +++r+   ++++
       EPX73651.1 227 LIHGPPGTGKTHTLIEVIRQ--LVNKG 251
                      79**************9999..44444 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00035
  Viral_helicase1  59 kstkgkililDEylllhaGyilllaalskaklvilfGDplQipfhsrnasfllahlpssl 118
                      +  k++++i+DE+ ++   + +  +al +ak +il GD+ Q + +      ++++ ++s 
       EPX73651.1 377 RNEKFDVVIIDEASQAL--EPQCWIALLGAKKAILAGDHMQLSPNL-----QIKQPYCSM 429
                      33579********8875..34445677**************87654.....444444444 PP

  == domain 3  score: 3.1 bits;  conditional E-value: 0.1
  Viral_helicase1 184 evttvhevqGltfdkVtlvllketdlelis..esrenllvAlTRhrkslvi 232
                      e+  v  vqG + +  ++ l +++d  ++   +++  l vA+TR ++ l +
       EPX73651.1 572 EMGSVDRVQGREKEAIIFSLVRSNDVREVGflSEKKRLNVAITRPKRHLCV 622
                      4778999*****9999888877777665557778999*******9998865 PP

>> UvrD-helicase  UvrD/REP helicase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.0   1.1e-07   7.4e-05       1     139 [.     208     409 ..     208     560 .. 0.70

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 1.1e-07
                    SSHHHHHHHHS...-SSEEEEEE-TTSSHHHHHHHHHHHHHHTSSSTGGGEEEEESSHHHHHHHHHHHHH.......................... CS
  UvrD-helicase   1 lnpeqreaias...lggpilveAsAGsGKTfvlaerilrlikeeeiepdrilvvTFTnkAaeElkeRiee.......................... 67 
                    ln++q+ea++    +++  l+   +G+GKT++l+e+i +l++++    +r+lv    n + + +  Ri                            
     EPX73651.1 208 LNDSQKEAVRFslgVRELALIHGPPGTGKTHTLIEVIRQLVNKG----KRVLVCGASNLSVDNIVDRISIygipmvrlghparllpsvlnhsldfl 299
                    68999999998666677899************************....9********************9************************** PP

                    .........................................HHHHCCHHCTT-H.........HHHHHHHHCTTSEEEEHHHHHHHHHHHHHGGTT CS
  UvrD-helicase  68 .........................................alkkaeqessdde.........rlrlalqnlseanisTlHsfcqkilkkeanrig 113
                                                                                   +   +  ++s++  +TlH+ ++++l++e +++ 
     EPX73651.1 300 srsgnfgevingisedieaelnkirktksgkekreifkhvrE-----------LrkdyrryesQNVSECLKASDIVFCTLHGAGSRQLRNEKFDVV 384
                    *****************9988877777777766664433332...........0333333322222333457889999**********99998888 PP

                    .SHTTTEEECHHHHHHCCHHHHHHHHH CS
  UvrD-helicase 114 .ldpnfrildeedeedlkqqellkell 139
                     +d+  + l+ +   ++  + + k++l
     EPX73651.1 385 iIDEASQALEPQC--WIALLGAKKAIL 409
                    4344444444433..444444444444 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.3   1.2e-06   0.00075       2     102 ..     224     394 ..     223     421 .. 0.72

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 1.2e-06
     DUF2075   2 avvlVtGvaGtGKtvvllnllael..........edde................................eertavylsvNhplvlvlr...ealakke 55 
                 ++ l++G +GtGKt  l++++ +l             +                                ++++  +ls+++++ +v+    e+++ + 
  EPX73651.1 224 ELALIHGPPGTGKTHTLIEVIRQLvnkgkrvlvcG--AsnlsvdnivdrisiygipmvrlghparllpsvLNHSLDFLSRSGNFGEVINgisEDIEAEL 320
                 6889********************76555555550..05555666777777788888888888888888856666666665555443321113333333 PP

     DUF2075  56 .......ekkkkkeafeklssfinnlsef....................kkaeekkeepkedvvivDEAhrllt 102
                        ++k+k+e f+ ++++ ++++++                        ++ +++k+dvvi+DEA  +l+
  EPX73651.1 321 nkirktkSGKEKREIFKHVRELRKDYRRYesqnvseclkasdivfctlhGAGSRQLRNEKFDVVIIDEASQALE 394
                 3333444777788888888888888877788888888888888899886777888999***********99987 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.2   8.8e-06    0.0056       6      34 ..     224     252 ..     221     402 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 8.8e-06
      AAA_22   6 gilvvtGesGtGKTtllrrlleqldeeak 34 
                  + +++G++GtGKT++l ++ +ql++  k
  EPX73651.1 224 ELALIHGPPGTGKTHTLIEVIRQLVNKGK 252
                 5789*******************987533 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0    0.0045       2.9       6      39 ..     209     243 ..     206     257 .. 0.73
   2 !    7.2   0.0     0.005       3.2      91     187 ..     349     445 ..     308     459 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0045
                 SHHHHHHHHH.HHH-SEEEEE--TTSSTTHHHHHH CS
        PhoH   6 tkeQkeylea.lkkndivfaiGpaGtGKtylaval 39 
                 + +Qke+++  l   ++  + Gp GtGKt+  + +
  EPX73651.1 209 NDSQKEAVRFsLGVRELALIHGPPGTGKTHTLIEV 243
                 6778888875155899*************976555 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.005
                 S-TTCHHHHHHTTSEEEEEGGGGTT--B-SE...EEEE-SGGG--HHHHHHHHTTB-TT-EEEEEE--------------THHHHHHTTT-TTEEEEE- CS
        PhoH  91 lgaekvekllekgkievaplaymRGrTlnda...fvilDEAQnttkeqmkmfltRlGenskvvvtGdvtqidlpkgkksGlaealevlknvegieivel 186
                 +++++v+++l+++ i +  l+    r l +    +vi+DEA  + + q  + l  lG   k++++Gd  q   + + k+   ++ e+l +++g ++  +
  EPX73651.1 349 YESQNVSECLKASDIVFCTLHGAGSRQLRNEkfdVVIIDEASQALEPQCWIAL--LGA-KKAILAGDHMQLSPNLQIKQPYCSMFERLLKIQGDKVKCF 444
                 56788888888899999999988889998744448******777776665555..676.59***********999999999999999999887776655 PP

                 - CS
        PhoH 187 k 187
                  
  EPX73651.1 445 L 445
                 5 PP

>> 4HB_MCP_1  Four helix bundle sensory module for signal transduction
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.63     4e+02     116     145 ..       5      34 ..       4      41 .. 0.89
   2 !   14.0   0.2   4.3e-05     0.028      80     129 ..     305     354 ..     299     362 .. 0.87

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.63
   4HB_MCP_1 116 eqlnaYrevrkkvlelakegkkdeAyqlye 145
                 ++++ Y++ + +++e +++ + +eA +l++
  EPX73651.1   5 TWIEDYSDKELQFIEKIQKVEIEEAEALLQ 34 
                 67899999*****************99887 PP

  == domain 2  score: 14.0 bits;  conditional E-value: 4.3e-05
   4HB_MCP_1  80 llkdieeleaeidkllekyektilteeEkelleefkeqlnaYrevrkkvl 129
                   + i+ ++++i+ +l+k++kt+  +e +e+++ + e  + Yr+++++ +
  EPX73651.1 305 FGEVINGISEDIEAELNKIRKTKSGKEKREIFKHVRELRKDYRRYESQNV 354
                 5667999***********************************99988754 PP

>> Helicase_RecD  Helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0    0.0013      0.84       2      45 ..     228     270 ..     227     275 .. 0.90
   2 ?    4.7   0.0     0.039        25      68     101 ..     357     391 ..     310     411 .. 0.55

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0013
  Helicase_RecD   2 ltAdRGRGKSaalGlalaaliaegksnilvtapskenvktlfef 45 
                    + + +G+GK+ +l  ++ +l+++gk ++lv+  s+ +v++++++
     EPX73651.1 228 IHGPPGTGKTHTLIEVIRQLVNKGK-RVLVCGASNLSVDNIVDR 270
                    78899******************98.9*****999999988776 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.039
  Helicase_RecD  68 elrvrkqrieyiapdellkl...keqadllvvDEAAa 101
                    +l  + + i +++ + + ++   +e+ d++++DEA++
     EPX73651.1 357 CL--KASDIVFCTLHGAGSRqlrNEKFDVVIIDEASQ 391
                    22..34444444444333320002356********85 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   1.9e-05     0.012      25      55 ..     224     254 ..     212     348 .. 0.82

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.9e-05
      AAA_16  25 elvllsGesGvGKsslvrellralekdggif 55 
                 el l++G++G+GK+  + e+ r+l  +g  +
  EPX73651.1 224 ELALIHGPPGTGKTHTLIEVIRQLVNKGKRV 254
                 789**************99999998885333 PP

>> AAA_31  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.0    0.0043       2.7      10      37 ..     231     258 ..     222     267 .. 0.87
   2 ?   -1.0   0.0       2.3   1.5e+03     115     126 ..     378     389 ..     373     417 .. 0.69
   3 ?    4.4   0.0     0.051        33      52     108 ..     527     584 ..     507     595 .. 0.70

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0043
      AAA_31  10 KGGvGKTTtsvnlaaalaklgkkvLlvD 37 
                   G GKT t +++   l ++gk+vL++ 
  EPX73651.1 231 PPGTGKTHTLIEVIRQLVNKGKRVLVCG 258
                 5599*********************985 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 2.3
      AAA_31 115 kdeYDyiiiDcp 126
                 ++++D++iiD  
  EPX73651.1 378 NEKFDVVIIDEA 389
                 468******954 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.051
      AAA_31  52 kneiektlyevlieeknikeaiiktk.venldlipssidLaeaeielvelekkeeilk 108
                  + + ++++e+++   + ++++i t  + ++ li s ++L ++e+e+ ++++ + + k
  EPX73651.1 527 AQIVCHHVLELMNAGLKEEDMAIVTPyNAQVALIRSMLKLRGIEVEMGSVDRVQGREK 584
                 3335556777777666666666666636667****************99888766554 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.2   7.7e-05      0.05       2      22 ..     227     247 ..     226     269 .. 0.76
   2 ?   -1.7   0.0       5.6   3.6e+03      57      67 ..     377     389 ..     319     395 .. 0.71

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 7.7e-05
                 EEESSTTSSHHHHHHHHHHHH CS
         AAA   2 llyGppGtGKTllakavakel 22 
                 l++GppGtGKT +   v+++l
  EPX73651.1 227 LIHGPPGTGKTHTLIEVIRQL 247
                 89*********9999999887 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 5.6
                 S..TSEEEEEETG CS
         AAA  57 a..kpsilfiDEi 67 
                 +  k  +++iDE+
  EPX73651.1 377 RneKFDVVIIDEA 389
                 1323478888886 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       4.3   2.7e+03     103     123 ..     156     177 ..     146     202 .. 0.61
   2 ?   12.2   0.0   0.00017      0.11       6      79 ..     227     394 ..     225     408 .. 0.62

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 4.3
      AAA_24 103 G.ygelaeefrrllkklqelrk 123
                   y ++++ ++++ k+l e+r 
  EPX73651.1 156 TtYERMKDTMIEWKKNLPEYRM 177
                 3367777777777777776666 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 0.00017
      AAA_24   6 liyGpsgiGKTtlakel.......gpkplfidtek.Glksldadkfpdie...............................swedfldevvel...... 59 
                 li Gp+g+GKT+++ e        g+++l++   + +++++ ++     +                               ++ ++++ + e+      
  EPX73651.1 227 LIHGPPGTGKTHTLIEVirqlvnkGKRVLVCGASNlSVDNIVDRI----SiygipmvrlghparllpsvlnhsldflsrsgNFGEVINGISEDieaeln 321
                 799***********9999999**9999**9955443333322221....11122333355555555555555555555444344444444333444455 PP

      AAA_24  60 .....................................................aaeladyktlviDtidelee 79 
                                                                      +  ++++++++iD ++++ e
  EPX73651.1 322 kirktksgkekreifkhvrelrkdyrryesqnvseclkasdivfctlhgagsrQLRNEKFDVVIIDEASQALE 394
                 5555555555555555555556666666777777777777777888888887766677788888888877755 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   6.9e-05     0.044      48      86 ..     224     262 ..     216     269 .. 0.87
   2 ?   -2.9   0.0       7.5   4.8e+03     105     117 ..     377     389 ..     372     394 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 6.9e-05
   IstB_IS21  48 enivllGpsGvGKshlaialgveavraglsvlfvrvedL 86 
                 e  ++ Gp+G+GK+h  i + ++ v++g++vl + +++L
  EPX73651.1 224 ELALIHGPPGTGKTHTLIEVIRQLVNKGKRVLVCGASNL 262
                 566899*************************97766655 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 7.5
   IstB_IS21 105 rllkvdllilDdl 117
                 r  k+d++i+D+ 
  EPX73651.1 377 RNEKFDVVIIDEA 389
                 55789******97 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.0    0.0021       1.4       3      30 ..     227     254 ..     226     271 .. 0.86
   2 ?    2.8   0.1      0.16     1e+02      44     103 ..     333     388 ..     322     393 .. 0.69

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0021
                 EEE--TTSSHHHHHHHHHHHH...GGGE CS
    NTPase_1   3 fiTGppGvGKtTlvkkvlellkssgvkv 30 
                 +i GppG+GKt  +  v+++l ++g +v
  EPX73651.1 227 LIHGPPGTGKTHTLIEVIRQLVNKGKRV 254
                 588********99999999999998765 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.16
                 --EEEEEET.T--EEEEEETT---SSEETTEEE-HHHHHHHHHHHHHHHHHHH-EEEE-- CS
    NTPase_1  44 rigFkivdlasgeegiLarveakreprvgkyvvdvesfeelalealrkalseadviviDE 103
                 r  Fk v    ++     +++ +++ + + +v++   ++  ++++lr+  ++ dv++iDE
  EPX73651.1 333 REIFKHVRELRKDYRRYESQNVSECLKASDIVFC--TLHGAGSRQLRN--EKFDVVIIDE 388
                 5555544333444445555555677777777777..478889999998..89*******9 PP

>> TrwB_AAD_bind  Type IV secretion-system coupling protein DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0    0.0001     0.067      18      49 ..     226     257 ..     220     266 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.0001
  TrwB_AAD_bind  18 ilivGttGsGKtqalekllrairargdraivl 49 
                    +li G  G+GKt +l + +r++ ++g+r++v 
     EPX73651.1 226 ALIHGPPGTGKTHTLIEVIRQLVNKGKRVLVC 257
                    6899*************************996 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   0.00011     0.069     113     161 ..     207     255 ..     177     258 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00011
       T2SSE 113 alkekiaevlrkavrerglilvsGgTgsGKttllyallkeinksderiv 161
                  l++ ++e++r ++  r l l+ G+ g+GKt +l  ++ ++ ++ +r++
  EPX73651.1 207 GLNDSQKEAVRFSLGVRELALIHGPPGTGKTHTLIEVIRQLVNKGKRVL 255
                 456889999**********************999666666555546654 PP

>> PIF1  PIF1-like helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       4.8     3e+03      98     145 ..      16      66 ..      11      66 .. 0.64
   2 ?    8.1   0.0    0.0021       1.3      24      60 ..     225     261 ..     207     279 .. 0.80
   3 ?   -0.8   0.0         1   6.5e+02     137     155 ..     400     418 ..     360     424 .. 0.70
   4 ?    0.5   0.1      0.43   2.7e+02     245     306 ..     528     584 ..     498     599 .. 0.68

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 4.8
                 HHHHC-SEEEEECGG.GSBHHHHHHHHHHHHHHCT-.....-SCCCC-EEE CS
        PIF1  98 ellkktsliiwDEap.mverecfealdrtlrdilkeke..idkpFGGktvv 145
                 + ++k++ + + Ea  ++++  + +l++   ++++     i++ FGGkt++
  EPX73651.1  16 QFIEKIQKVEIEEAEaLLQKYPLPTLQKNGIALINLALssIRTGFGGKTII 66 
                 566666666666664256666777777766665554334588999999997 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.0021
                 -EEEEESTTSSCHHHHHHHHHHCHCTCCCEEEEESSH CS
        PIF1  24 lfFvtGsgGtgKtflwkallkklrsegkivlavAssG 60 
                 l  ++G  GtgKt  + +++ +l ++gk vl+   s 
  EPX73651.1 225 LALIHGPPGTGKTHTLIEVIRQLVNKGKRVLVCGASN 261
                 45679*************************9976665 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 1
                 SCCCC-EEEEE--TTS--- CS
        PIF1 137 kpFGGktvvlgGDfrQilP 155
                    G k  +l+GD  Q+ P
  EPX73651.1 400 ALLGAKKAILAGDHMQLSP 418
                 4457777888888888877 PP

  == domain 4  score: 0.5 bits;  conditional E-value: 0.43
                 CHCCS---SS--...........EEEESSCCHHHHHHHHHHCCSSS--EEEE-EEE...... CS
        PIF1 245 eivsevygdllqeltdkeyleerailcptnedvdeiNnyvlsklpgeekeylssDsisksse 306
                 +iv + + +l++   ++   e+ ai++p n +v+ i    + kl g e e  s+D ++  ++
  EPX73651.1 528 QIVCHHVLELMNAGLKE---EDMAIVTPYNAQVALIR--SMLKLRGIEVEMGSVDRVQGREK 584
                 34444444444433333...5789**********995..56689999999999999876655 PP

>> UvrD_C  UvrD-like helicase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.1       9.3     6e+03      50     246 ..     327     344 ..     302     360 .. 0.49
   2 ?    6.6   0.0     0.007       4.5      43     101 ..     515     573 ..     496     592 .. 0.87
   3 ?    3.6   0.0     0.055        35     325     344 ..     604     622 ..     593     625 .. 0.79

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 9.3
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      UvrD_C  50 teeeEaekiaatikallekneklediavLvRsnkdadkiskaLkkegipfnvvdeekfFkreeikdilaylkllankqdkialkrilkrlvlgigkatv 148
                 ++ +E + i++ +++l                                                                                   
  EPX73651.1 327 KSGKEKREIFKHVRELR---------------------------------------------------------------------------------- 343
                 22223333333333333.................................................................................. PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      UvrD_C 149 eriseelkklglsltDfikedtleygeeFieliraleeknlelllkkiektaeerqalvskyadlfkelaeklaelkekseskrkkeeklenlreLys 246
                                                                                                                  +
  EPX73651.1 344 -------------------------------------------------------------------------------------------------K 344
                 .................................................................................................3 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.007
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      UvrD_C  43 ivvleaeteeeEaekiaatikallekneklediavLvRsnkdadkiskaLkkegipfnv 101
                   + ++++++ Ea+ +   + +l++   k+ed+a+++  n++  +i   Lk  gi++ +
  EPX73651.1 515 ALYQDSKSNKWEAQIVCHHVLELMNAGLKEEDMAIVTPYNAQVALIRSMLKLRGIEVEM 573
                 5678899999*****************************************99998865 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.055
                 xxxxxxxxxxxxxxxxxxxx RF
      UvrD_C 325 eEEkRlfYVaiTRAkkrLfi 344
                 +E kR + VaiTR+k+ L +
  EPX73651.1 604 SEKKR-LNVAITRPKRHLCV 622
                 55555.57**********87 PP

>> PCB_OB  Penicillin-binding protein OB-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0       1.4   9.3e+02      84      99 ..      82      97 ..      74     104 .. 0.82
   2 ?    9.4   0.2    0.0028       1.8      10      69 ..      93     152 ..      86     167 .. 0.76
   3 ?    0.0   0.0       2.2   1.4e+03      65     107 ..     337     377 ..     314     379 .. 0.76
   4 ?   -1.3   0.0       5.7   3.6e+03      15      60 ..     506     551 ..     498     579 .. 0.75

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 1.4
                CCC--TTEEEEEEE-T CS
      PCB_OB 84 sdvlkpGdvvlvrkee 99
                +  ++pGdvv++ + +
  EPX73651.1 82 ANSFSPGDVVRLNQGG 97
                56789******98865 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.0028
                 T-SHCT..HHHHHHHCCTSSTCTTEEEEEEEEEETTEEEEEETTS-EEEEEGGGGTTTGC CS
      PCB_OB  10 lealaeadeealeealkklpdsgelrpAvVlsvseksarvglrdgetgtipleglkwark 69 
                 l++  ++++ ++++ ++k ++ ++  ++v+++v+eks++v+l+++e +   +egl++++ 
  EPX73651.1  93 LNQGGGKSDTRASKSVDKSKRTDSSSEGVITRVQEKSISVALNSEEDVPSLAEGLSIVKL 152
                 44444456677889999*************************998887766677766665 PP

  == domain 3  score: 0.0 bits;  conditional E-value: 2.2
                 TTTGCCTTTS-B---CCCHCCC--TTEEEEEEE-TT.S-EEEE CS
      PCB_OB  65 kwarkvlsdkkqgkapksasdvlkpGdvvlvrkeedegewrLr 107
                 k +r+ l+++ +  + +++s+ lk+ d+v+   ++  g+ +Lr
  EPX73651.1 337 KHVRE-LRKDYRRYESQNVSECLKASDIVFCTLHGA-GSRQLR 377
                 55666.455666778899***********9887776.666665 PP

  == domain 4  score: -1.3 bits;  conditional E-value: 5.7
                 T..HHHHHHHCCTSSTCTTEEEEEEEEEETTEEEEEETTS-EEEEE CS
      PCB_OB  15 eadeealeealkklpdsgelrpAvVlsvseksarvglrdgetgtip 60 
                 e+d++++ +al + ++s+++++ +V     + +++gl++++ + ++
  EPX73651.1 506 EDDDKDMGSALYQDSKSNKWEAQIVCHHVLELMNAGLKEEDMAIVT 551
                 5667788888999999999999888877776677766666555555 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00023      0.15       3      47 ..     227     273 ..     226     292 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00023
                 EEE--SSSSHHH.HHHHGGGGB.S--EEEEE--TT--HHHHH--B-- CS
       AAA_5   3 lLvGppGtgKse.laerlaaal.nreveyvqltrdtteedlkgrrei 47 
                 l+ GppGtgK+  l+e + +++ + + + v + ++++ ++++ r++i
  EPX73651.1 227 LIHGPPGTGKTHtLIEVIRQLVnKGKRVLVCGASNLSVDNIVDRISI 273
                 688*******961566666666888999999999********99987 PP

>> TK  Thymidine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.0    0.0053       3.4       3      37 ..     225     259 ..     223     274 .. 0.88
   2 ?    2.4   0.1      0.19   1.2e+02      25      86 ..     326     389 ..     316     402 .. 0.58

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0053
          TK   3 ielilgpmfaGKsteLlrrvkryqlaekkvvvika 37 
                 + li gp  +GK+ +L++ ++++  + k+v+v  a
  EPX73651.1 225 LALIHGPPGTGKTHTLIEVIRQLVNKGKRVLVCGA 259
                 789***************************99765 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.19
          TK  25 yqlaekkvvvikaakdnRysegkvvthdgi.sleakksktssle.eikeeleeedvdvvlvDEa 86 
                  +  + k  ++k++ + R    +  +++   +l+a  +  ++l+   +++l++e++dvv++DEa
  EPX73651.1 326 TKSGKEKREIFKHVRELRKDYRRYESQNVSeCLKASDIVFCTLHgAGSRQLRNEKFDVVIIDEA 389
                 5555555556666555554444433333220333333333333313456778899********8 PP

>> Flavi_DEAD  Flavivirus DEAD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.0    0.0043       2.7       6      43 ..     225     261 ..     221     278 .. 0.80
   2 ?    1.4   0.0      0.43   2.7e+02      53     105 ..     342     390 ..     328     406 .. 0.73

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0043
                 EEEEE--TTS-TTTTHHHHHHHHHHHTT--EEEEESSH CS
  Flavi_DEAD   6 ltvldlhPGaGktrkvlpelvkeaierrlrtlvLaPtr 43 
                 l +++  PG+Gkt+  l e++++ +++ +r lv     
  EPX73651.1 225 LALIHGPPGTGKTHT-LIEVIRQLVNKGKRVLVCGASN 261
                 6677778******96.6799**********99976655 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.43
                 TTTS-EEE-------------SEEEEEHHHHHHHHHHT------SEEEEETTT CS
  Flavi_DEAD  53 lkglevryktsavkeektgrelvdvmchatftkrllspvrkknyeliimDeah 105
                 l++   ry+++ v+e  +  ++v    h +       + r+++++++i+Dea 
  EPX73651.1 342 LRKDYRRYESQNVSECLKASDIVFCTLHGAGS----RQLRNEKFDVVIIDEAS 390
                 55555678888887777777777766666543....34578899*******95 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00057      0.37       1      23 [.     225     247 ..     225     301 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00057
      AAA_33   1 lvllvGlpGsGKstlaerllkkl 23 
                 l l++G+pG+GK++ + +++++l
  EPX73651.1 225 LALIHGPPGTGKTHTLIEVIRQL 247
                 5689**********999888876 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.0     0.004       2.6       4      36 ..     226     258 ..     223     263 .. 0.90
   2 ?    1.0   0.0      0.45   2.9e+02      76      94 ..     373     391 ..     355     427 .. 0.81

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.004
                 EEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEE CS
       SRP54   4 illvGlqGaGKTttlaKLaallkkegkkvllva 36 
                  l+ G+ G+GKT tl  + ++l ++gk+vl++ 
  EPX73651.1 226 ALIHGPPGTGKTHTLIEVIRQLVNKGKRVLVCG 258
                 6899*************************9876 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.45
                 HHHHHHTTSSEEEEEE--S CS
       SRP54  76 vekakeekidvvlvDTaGr 94 
                  ++ ++ek+dvv++D a +
  EPX73651.1 373 SRQLRNEKFDVVIIDEASQ 391
                 56788999*******9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (658 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       980  (0.05466); expected 358.6 (0.02)
Passed bias filter:                      803  (0.0447878); expected 358.6 (0.02)
Passed Vit filter:                       129  (0.00719505); expected 17.9 (0.001)
Passed Fwd filter:                        28  (0.00156172); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              28  [number of targets reported over threshold]
# CPU time: 0.79u 0.31s 00:00:01.10 Elapsed: 00:00:00.48
# Mc/sec: 4100.06
//
Query:       EPX73652.1  [L=286]
Description: glutamate-cysteine ligase regulatory subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    0.00097   18.4   0.0     0.0013   18.0   0.0    1.2  1  Aldo_ket_red  Aldo/keto reductase family


Domain annotation for each model (and alignments):
>> Aldo_ket_red  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   7.3e-08    0.0013     116     160 ..     157     199 ..     111     230 .. 0.75

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 7.3e-08
                   .HHHHHHHHHHHHHTTSEEEEEEES--HHHHHHHHHTTT--EEEE CS
  Aldo_ket_red 116 sieevldaleelvkeGkiraiGvSnfsveqlekakkkkkvkivav 160
                   s  +++++lee +  Gk++ +GvS+f v  le++     v+i+  
    EPX73652.1 157 SWIDTWKILEEKIHDGKVKTLGVSEFGVPELERL--IPNVEISPE 199
                   56789**********************9999988..344444333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       436  (0.0243181); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.28s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 2045.10
//
Query:       EPX73653.1  [L=261]
Description: peroxin Pex28/29 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.1e-11   42.9  20.9    9.5e-07   28.1   2.9    3.0  3  Pex24p    Integral peroxisomal membrane peroxin
  ------ inclusion threshold ------
       0.37   10.6   2.8       0.62    9.9   2.8    1.5  1  DUF2238   Predicted membrane protein (DUF2238)


Domain annotation for each model (and alignments):
>> Pex24p  Integral peroxisomal membrane peroxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   4.5     2e-08   0.00018       4      77 ..       6      73 ..       3      78 .. 0.83
   2 !   28.1   2.9   1.1e-10   9.5e-07     112     203 ..      78     166 ..      73     207 .. 0.78
   3 !    4.3   1.4    0.0018        17     292     329 ..     204     239 ..     174     255 .. 0.75

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 2e-08
      Pex24p  4 sspllssnppqlssrLakifplllildkvlkiltWtnpdktlsfllvytficlvpylelvvlplllllfvvmvp 77
                ++ lls+n+++++ r a +f +    d++++ +tW++p k l   l +t++ l p+   v   +l l+fv m+p
  EPX73653.1  6 NPLLLSQNSIRFATRVAIFFIIR---DELIEAITWKHPVKSLCLGLTITLLYLHPVSFSV---ILTLIFVTMMP 73
                6679*******************...**************99999988888888877555...66666666666 PP

  == domain 2  score: 28.1 bits;  conditional E-value: 1.1e-10
      Pex24p 112 keivlnLrdlqnkmedllnpidalekflkelag.fkdenlstllfltllltpililllsrlipwrlillvlg.ailltyHpsvkkvllrllwrl 203
                  ++ +nLrdlqn m  +++ +d+l  f +++ + ++   +s++l+++l+++p+l +l    i + + l v+  +il++ Hp ++ ++ +  w +
  EPX73653.1  78 HDVTTNLRDLQNFMASYSSSYDQLVHFRQNYYHyISPSTISSVLVIFLIVVPLLAFLR---ISIDRYLPVGLwIILIALHPHFRSSFSN--WYF 166
                 6999*************************9999789999*************999998...788777777777999********99999..533 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.0018
      Pex24p 292 alkespsgvdhledvkpPedWkWdekkkWrlDlepdew 329
                 +  e+p  v++le + pP +++W   ++W+  + p+e+
  EPX73653.1 204 KDSELP-LVPSLELIDPPVNYSWAPDSSWTFHS-PNEF 239
                 444545.4999******************9887.5665 PP

>> DUF2238  Predicted membrane protein (DUF2238)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   2.8   6.9e-05      0.62      10      73 ..      49     112 ..      41     152 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 6.9e-05
     DUF2238  10 tyrrfrlsnlayllillflvlhlvGghYtYaevplddwlkelfglernkYDrlvHfaqGlllal 73 
                 t   + l  +++ +il+++++ ++    t+  +     l++++ +   +YD+lvHf q  + ++
  EPX73653.1  49 TITLLYLHPVSFSVILTLIFVTMMPISLTHDVTTNLRDLQNFMASYSSSYDQLVHFRQNYYHYI 112
                 55566788899999999999999999999999999999******************99888554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       870  (0.0485247); expected 358.6 (0.02)
Passed bias filter:                      501  (0.0279436); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 1805.69
//
Query:       EPX73654.1  [L=394]
Description: cystathionine beta-lyase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.2e-122  409.2   0.0   1.3e-122  409.0   0.0    1.0  1  Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
    1.2e-06   28.0   0.0    1.9e-06   27.3   0.0    1.2  1  Aminotran_1_2    Aminotransferase class I and II
     0.0038   16.6   0.0       0.02   14.2   0.0    1.9  2  DegT_DnrJ_EryC1  DegT/DnrJ/EryC1/StrS aminotransferase family
     0.0052   15.4   0.0     0.0091   14.6   0.0    1.3  1  Met_gamma_lyase  Methionine gamma-lyase
     0.0099   14.9   0.0      0.016   14.2   0.0    1.4  1  Aminotran_5      Aminotransferase class-V
  ------ inclusion threshold ------
      0.029   13.2   0.0      0.048   12.5   0.0    1.2  1  GDC-P            Glycine cleavage system P-protein


Domain annotation for each model (and alignments):
>> Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  409.0   0.0  4.5e-126  1.3e-122       2     381 ..      15     386 ..      14     387 .. 0.97

  Alignments for each domain:
  == domain 1  score: 409.0 bits;  conditional E-value: 4.5e-126
                      HHHHHTTTTCHTTTTBSS--B---SBBBESSHHHHCTTCSSS-SBTTT--HHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHTTS-TTEEEE CS
  Cys_Met_Meta_PP   2 TllvhagqekdeqtgavavpiyltstykfkdvdeafageekgyeYsRsgnptrsvleeriaaLeggeaalavssGmaAiaaailallkaGdeiv 95 
                      T l++ + ++d q++a++vpiy+++t+k++     + +e  +++Y+Rsgnptr++l+ ++a+L ++++++++s Gm+A+  +il+ +k+G++iv
       EPX73654.1  15 TELLRVEGNQD-QFNASSVPIYQSATFKQH-----SLDEMGKFDYTRSGNPTRTALQVHLAKLMKAKHCFVTSNGMSAL-DMILKTCKTGSHIV 101
                      77888888888.8*****************.....8888999*************************************.999*********** PP

                      EESTSSHHHHHHHHHTHHHTTCEEEEESTTSHHHHHHHCCTTEEEEEEESS-TTTT----HHHHHHHHHHTT..-EEEEEGTTTHTTTS-GGGG CS
  Cys_Met_Meta_PP  96 vsddlYggtqrllkkvlkklgievkfvdtsdleelekaikentklvylEtptnpllkvvDiekiaklakkag..vlvvvDntfaspllqrplkl 187
                      + ddlYgg+ rll+  + + g +v+ vdt dl ++e+a+++ t lv++E+ptnpl+k++D+++i+++++++   +++v+Dnt++sp+l++pl++
       EPX73654.1 102 AGDDLYGGSDRLLNLNIANYGFQVSNVDTRDLTAFEAALRPDTALVLVESPTNPLIKICDVHAIVRITREKAknAVLVMDNTMLSPILCNPLDF 195
                      ********************************************************************998667******************** PP

                      T-SEEEEETTTTTTCSSS--EEEEEESSCHHHHHHHHHHHHHHT-B--HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEE-TTS CS
  Cys_Met_Meta_PP 188 gaDivvhSaTKylgGhsdvvaGvivvkgkeelkkelkflqnalGavlspfdawlllrGlkTLslRlerhqenAlkvAefLekhpkvekvyYpgl 281
                      g Div++SaTK+l+Gh+d+++G+i++ + +el+k++ f  na+Ga l pf+++lllrG+kT+++R+er+q+nA+++A+fL+++     v++pgl
       EPX73654.1 196 GYDIVYESATKFLSGHHDIMGGAIATRS-DELAKSVFFNINACGAGLAPFESFLLLRGIKTMGIRVERAQQNAIELAKFLKSKG--LFVNFPGL 286
                      *************************999.****************************************************998..68****** PP

                      .TTSTTHHHHHHHSSSG-SEEEEEESSHHHHHHHHHHC-SSSEECSS-SSSS-EEEETTTTTTTTSCHHHHHHTTS-TTEEEEE--SS-HHHHH CS
  Cys_Met_Meta_PP 282 .pshpqhelakkqlkgaggvlsFelkseeekakkfvdnlklfslaeslGgveslielpasmthasipkeereaagvtddliRlsvGiEdvdDli 374
                       p++++  +++++ +g g+v+s  +++  e +k +v+++klf +++s+G+vesli++pa+m+hasi+k+ r+++g+ +dliR+svGiE+v+Dl+
       EPX73654.1 287 dPDCKSTAVFNSFSRGPGAVMSIVTGNV-EFSKIIVESTKLFHISVSFGCVESLISMPAYMSHASIKKDVRDQRGLPEDLIRISVGIENVEDLK 379
                      6789999***************999888.7899************************************************************* PP

                      HHHHHHH CS
  Cys_Met_Meta_PP 375 aDlkqal 381
                      +Dl++a+
       EPX73654.1 380 SDLENAI 386
                      ****997 PP

>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.3   0.0   6.5e-10   1.9e-06      39     188 ..      55     182 ..      26     183 .. 0.85

  Alignments for each domain:
  == domain 1  score: 27.3 bits;  conditional E-value: 6.5e-10
                    ST-BTTHHHHHHHHHHHHHCTCTTCHTTGGEGEEEESHHHHHHHHHHHHHHHTTT-EEEEEESS-THHHHHHHHT....TSEEEEEEBEETTTTEE CS
  Aminotran_1_2  39 eygpidglpeleealakflgrseklklkreaavvvgsGagaliealifllklnpgdeilvpdptyasyknilrls....ggevvryplyseedfhl 130
                    ++g+++   +l+  lak+++        ++   v+++G +al+ +l+++    +g+ i++ d  y+  ++ l+l+    g++v  +        + 
     EPX73654.1  55 RSGNPT-RTALQVHLAKLMK--------AKHCFVTSNGMSALDMILKTCK---TGSHIVAGDDLYGGSDRLLNLNianyGFQVSNVD-------TR 131
                    566666.8899999******........7778******************...6*************99988775222266666666.......88 PP

                    -HHHHHHHHTTHHCTTETEEEEEEESS-TTT--B--HHHHHHHHHHHHHTTEEEEEEE CS
  Aminotran_1_2 131 dlealeealkeapegnkktkvilvesphNPtGtvatleeleklldlakkynlllfvDe 188
                    dl a+e+al+        t ++lvesp NP  ++++   ++ + +  k++n++l+ D 
     EPX73654.1 132 DLTAFEAALRP------DTALVLVESPTNPLIKICDVHAIVRITR-EKAKNAVLVMDN 182
                    **********9......899***********************54.455699999995 PP

>> DegT_DnrJ_EryC1  DegT/DnrJ/EryC1/StrS aminotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.0   6.8e-06      0.02      12      61 ..      47      97 ..      36     107 .. 0.80
   2 ?   -0.4   0.0      0.19   5.6e+02     180     194 ..     216     230 ..     214     252 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 6.8e-06
                     HHHTSS-SSS.SHHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHHTTTT CS
  DegT_DnrJ_EryC1 12 evlksgwlts.gpeveeFEkafaaylgvkhaiavssGtaAlhlaLralgvg 61
                     e+ k + ++s +p+ +++   +a+ +++kh+  +s+G +Al ++L+ ++ g
       EPX73654.1 47 EMGKFDYTRSgNPTRTALQVHLAKLMKAKHCFVTSNGMSALDMILKTCKTG 97
                     55555556666788899999***************************9887 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.19
                      -EEEEESTHHHHHHH CS
  DegT_DnrJ_EryC1 180 GGavvtndeelaeka 194
                      GGa+ t+++ela+ +
       EPX73654.1 216 GGAIATRSDELAKSV 230
                      9***********986 PP

>> Met_gamma_lyase  Methionine gamma-lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0     3e-06    0.0091     128     259 ..     116     243 ..      95     282 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 3e-06
  Met_gamma_lyase 128 fgikykevdlleegkvdieavkeaikektkliliqrskGyserkslsieeieeiiklvkeinedvivfvdncyGefveekePtevGadliaGsl 221
                       +i     ++ + ++ d++a ++a++++t l+l+       + + ++i +++ i+++ +e  ++ ++ +dn     +   +P + G d++  s 
       EPX73654.1 116 LNIANYGFQVSNVDTRDLTAFEAALRPDTALVLVESP----TNPLIKICDVHAIVRITREKAKNAVLVMDNTMLSPI-LCNPLDFGYDIVYESA 204
                      5555555566666677888889999999999998765....57899**************************98888.568************* PP

  Met_gamma_lyase 222 iknpGGgiaktGGyiaGkee.lveaasyrltaPGiGkea 259
                       k   G    +GG ia + + l ++  + + a G G   
       EPX73654.1 205 TKFLSGHHDIMGGAIATRSDeLAKSVFFNINACGAGLAP 243
                      *****************9861555566788888888654 PP

>> Aminotran_5  Aminotransferase class-V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.0   5.4e-06     0.016     125     203 ..     129     208 ..      46     211 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 5.4e-06
                  SCBEGGGHHHH--TTEEEEEEESBETTTTEB--HHHHHHHHHH..TT-EEEEE-TTTTTTS---HHHHTESEEEEETTTTT CS
  Aminotran_5 125 geldldelekllnektklvaithvsnvtGtiqpveeigklakk..kgalvlvDaaqavghipidvkklgvDflafsghKll 203
                   + dl ++e++l+++t+lv +    n +  i +v++i+++ ++  k+a++++D + ++  i  +  ++g D+++ s+ K+l
   EPX73654.1 129 DTRDLTAFEAALRPDTALVLVESPTNPLIKICDVHAIVRITREkaKNAVLVMDNT-MLSPILCNPLDFGYDIVYESATKFL 208
                  457899***********************************99644999999975.6666778888899999999999976 PP

>> GDC-P  Glycine cleavage system P-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.6e-05     0.048     142     260 ..      86     207 ..      79     212 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.6e-05
                 HHHHHHHH-SSS--EEEEETTS-HHHHHHHHHHHGGGT-EEEEE-GGG--S-.....S-EEEEEEEES-T.TSB----HHHHHHHHHTT-EEEEEE-.T CS
       GDC-P 142 Avllaaraskkkakkvvvdkkvhpqtlevlktrakglgieivevdlteekvtd..kekevagvlvqypnt.eGriedlkelvekakkkkslvvvaad.l 236
                 A+ ++ ++ k   +++v   +++  + + l+    ++g+++  vd+++ ++ +   + ++a vlv  p     +i d++++v  +++k    v+++d  
  EPX73654.1  86 ALDMILKTCKTG-SHIVAGDDLYGGSDRLLNLNIANYGFQVSNVDTRDLTAFEaaLRPDTALVLVESPTNpLIKICDVHAIVRITREKAKNAVLVMDnT 183
                 555655555555.7889999999999999999999*****9999988887777556799999***999652679*********9998766665555505 PP

                 TGGGTB--HHHHT-SEEEEE-TTT CS
       GDC-P 237 laLtllkpPgelgaDivvGsaqrf 260
                 +   +l  P ++g Div  sa +f
  EPX73654.1 184 MLSPILCNPLDFGYDIVYESATKF 207
                 5556**************999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (394 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       412  (0.0229795); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 2740.65
//
Query:       EPX73655.1  [L=375]
Description: pig-K [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.4e-39  135.4   0.4    3.1e-39  135.0   0.4    1.1  1  Peptidase_C13  Peptidase C13 family


Domain annotation for each model (and alignments):
>> Peptidase_C13  Peptidase C13 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.0   0.4   1.7e-43   3.1e-39       1     213 [.      26     240 ..      26     257 .. 0.91

  Alignments for each domain:
  == domain 1  score: 135.0 bits;  conditional E-value: 1.7e-43
                    EEEEEEE---SGGGHHHHHHHHHHHHHHHCTT--GGGEEEEE---STT-TT-SSTT--BSSTT-.-B-STT.--ESBEGGG-SHHHHHHHHHT-TC CS
  Peptidase_C13   1 lyavlvAGsngydnyrhqadvchayqllkkkglkdenivvvmydDiaereenPlagkiinkpkg.edvykg.vkidYtgkkvtkenflavllGdks 94 
                    ++avl++ s+ + nyrh a+v  +y+ +k+ g++d +i++++ dD a +++n ++g+++++ ++  d+y   ++idY+g +vt e f+  l+   s
     EPX73655.1  26 NWAVLISTSRFWFNYRHAANVLGIYRSVKRLGIPDSQIILMIADDYACNSRNLFPGTVFDNADRdMDLYGEdIEIDYKGYEVTVEAFVRLLTERVS 121
                    6**********************************************************9998637999777********************8877 PP

                    .G..TT-------TTSEEEEEEES-EETTEEE-SSSSEEEHHHHHHHHHHHHHCT--SEEEEEEESTTGGGGTTTS-TTSSEEEEESS-TTS--BE CS
  Peptidase_C13  95 .v..gsgkvlksgkeDnvfiyltdhGapgvlevpeeddleakdLaeaLkkmhakkkykklviyleaceSgsmfeellkdinvyaltAanadessfg 187
                        +s+++l+ ++  n++iy+t hG++g++++ ++d+l+ +d+a+aL++mh++k+y++++++ ++c++ s+ ++   + n++ + +++   ss++
     EPX73655.1 122 eNtpASKRLLT-NEHSNILIYMTGHGGDGFIKFQDSDELSSEDFADALEQMHQHKRYNEILFIADTCQANSLYKK-IYSPNIVSIGSSEIGTSSYS 215
                    54656666665.56779**********************************************************.99****************** PP

                    ECE.CTTTTCEEEEHHHHHHHHHHHH CS
  Peptidase_C13 188 tycedeedgtylgdlfsvawledsdd 213
                        d+++g    d f  + le  ++
     EPX73655.1 216 HHA-DSDIGVAVIDRFTFSTLEFLEN 240
                    *66.9999999999999888887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (375 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       530  (0.029561); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2605.31
//
Query:       EPX73656.1  [L=356]
Description: dynactin complex subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    9.3e-13   48.3  11.2    7.2e-12   45.3  11.2    2.3  1  Dynamitin     Dynamitin
     0.0036   17.5  12.0       0.91    9.8   0.3    4.7  5  ABC_tran_CTD  ABC transporter C-terminal domain
  ------ inclusion threshold ------
      0.028   14.3   0.2          3    7.8   0.0    3.3  3  HSBP1         Heat shock factor binding protein 1
        0.1   12.5   2.6       0.42   10.6   0.0    3.1  4  SOAR          STIM1 Orai1-activating region
       0.47   10.5   6.6       0.11   12.6   1.7    2.5  3  DUF1539       Domain of Unknown Function (DUF1539)
       0.73   10.2   5.5        1.9    8.8   1.6    3.2  3  BLOC1_2       Biogenesis of lysosome-related organelles compl


Domain annotation for each model (and alignments):
>> Dynamitin  Dynamitin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.3  11.2   2.4e-15   7.2e-12     131     375 ..      79     342 ..       9     354 .. 0.74

  Alignments for each domain:
  == domain 1  score: 45.3 bits;  conditional E-value: 2.4e-15
   Dynamitin 131 laeqleslqkqLeel....eellgedsaa.sltdaqealakrllsqleefkeskaaskkkeksnkityelyyapeq.......eksqqlakiaelekRL 217
                    +l+ ++++Le+l    e   +e++++ sl++  ++l+ + +s +++  ++ ++s++++  +  t el ++p+         + +   k+ +le R+
  EPX73656.1  79 YYIRLTRIRRELEDLwdeaE-STQEKQEVdSLSNLLDKLWMKKMSGVQKSYSADMDSESDPYARLGTCELCKQPSVrtkqsqgIEPAIPLKMGDLESRI 176
                 44567888888888885522.22333333466666666677777777777777777777788999999999999996644333333344699******* PP

   Dynamitin 218 aeLEklvGlssesldelsanlkprplletlsrLeaklslL...qtahLDaierRlksllaeldelaekreaiekadaeg............qekKIne. 300
                 + LE+ +G  +e l+ +      ++ le l+  e+   lL   + +  ++i++Rl ++ ++ +e +  + ++ +                 + + ++e 
  EPX73656.1 177 STLEACIGDAKEPLSMT-----VESCLEKLQAFEKDP-LLyenKLSTWEEIQKRLPKVGSNDQEQNVYEGNS-SS---PssfvptglldekEYALLSEl 265
                 ***********987755.....667899999998775.5626555666888888888877544444444222.22...23468999**99988899996 PP

   Dynamitin 301 LYellkrldplspilPavldRLrsLraLHeeAaefsqtLteleeeqkeiseelkslkelLekvees.l.kenletvk 375
                 L+  l+   +   ++Pa+l+RL+sL  LH + ae ++  ++le+  ++ + +l+++++lL+ +e+s + ++n+e ++
  EPX73656.1 266 LFVHLQDAGNYQALVPALLKRLKSLHNLHLDTAETMNRWKNLENILESTAHSLNQWTQLLKHLETSsFpEQNMEEIQ 342
                 7999************************************************************9723345555444 PP

>> ABC_tran_CTD  ABC transporter C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.2       1.3   3.8e+03      50      60 ..      83      93 ..      74     103 .. 0.54
   2 ?   -1.1   0.1      0.78   2.3e+03       3      20 ..      99     116 ..      97     123 .. 0.80
   3 !    9.8   0.3   0.00031      0.91      12      67 ..     164     221 ..     154     223 .. 0.75
   4 !    6.2   0.0     0.004        12      33      68 ..     272     308 ..     266     309 .. 0.78
   5 !    6.0   0.1    0.0049        15      35      55 ..     332     353 ..     318     356 .] 0.70

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.3
  ABC_tran_CTD 50 leeleaeLeel 60
                  l++++ eLe l
    EPX73656.1 83 LTRIRRELEDL 93
                  33444444433 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.78
  ABC_tran_CTD   3 sykeqreleeleaeIeaL 20 
                   s +e++e + l + +++L
    EPX73656.1  99 STQEKQEVDSLSNLLDKL 116
                   678999999888877776 PP

  == domain 3  score: 9.8 bits;  conditional E-value: 0.00031
  ABC_tran_CTD  12 eleaeIeaLEeeiaeleaeladpelysdp..eklaelsaeleeleae...LeelyerWeeL 67 
                   +++ ++  LE +i++lea + d+     p   ++    ++l++ e++    e++++ Wee 
    EPX73656.1 164 AIPLKMGDLESRISTLEACIGDAK---EPlsMTVESCLEKLQAFEKDpllYENKLSTWEEI 221
                   6899999***********999996...3334556666666666666433389999999997 PP

  == domain 4  score: 6.2 bits;  conditional E-value: 0.004
  ABC_tran_CTD  33 dpelysdp.eklaelsaeleeleaeLeelyerWeeLe 68 
                   d++ y+    +l +  + l++l  + +e + rW  Le
    EPX73656.1 272 DAGNYQALvPALLKRLKSLHNLHLDTAETMNRWKNLE 308
                   555554444567777888*****************98 PP

  == domain 5  score: 6.0 bits;  conditional E-value: 0.0049
  ABC_tran_CTD  35 ely.sdpeklaelsaeleelea 55 
                   ++  ++ e+++ ls+++++le+
    EPX73656.1 332 SFPeQNMEEIQTLSKRIANLEE 353
                   4442566888888888888887 PP

>> HSBP1  Heat shock factor binding protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.0     0.001         3      21      46 ..     161     186 ..     158     189 .. 0.84
   2 ?   -1.6   0.0      0.86   2.6e+03       3      15 ..     190     202 ..     188     203 .. 0.85
   3 ?    2.5   0.0     0.043   1.3e+02      26      42 ..     338     354 ..     323     356 .] 0.86

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.001
       HSBP1  21 msdqilsriDdMssriDdLEksiadl 46 
                 ++  i  ++ d++sri  LE+ i d 
  EPX73656.1 161 IEPAIPLKMGDLESRISTLEACIGDA 186
                 6667888**************99886 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.86
       HSBP1   3 LtavVenlLqqlq 15 
                 L+  Ve  L++lq
  EPX73656.1 190 LSMTVESCLEKLQ 202
                 77899*****999 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.043
       HSBP1  26 lsriDdMssriDdLEks 42 
                 ++ i  +s+ri +LE+s
  EPX73656.1 338 MEEIQTLSKRIANLEES 354
                 6778899********87 PP

>> SOAR  STIM1 Orai1-activating region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1      0.47   1.4e+03      60      85 ..      38      63 ..      12      65 .. 0.69
   2 ?   -2.8   0.0       2.1   6.2e+03      61      90 ..     175     204 ..     173     207 .. 0.72
   3 ?   10.6   0.0   0.00014      0.42      44      97 ..     255     311 ..     252     315 .. 0.72
   4 ?   -1.5   0.1      0.82   2.4e+03       4      31 ..     315     342 ..     312     353 .. 0.68

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.47
        SOAR 60 sslddvdkkileakqaleevtkelke 85
                 s++++ ++i++a++   ++t++  e
  EPX73656.1 38 YSVEQCMQAIQNARKPKPMTTCKNDE 63
                46677777777777766666666555 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 2.1
        SOAR  61 slddvdkkileakqaleevtkelkerqeRW 90 
                 +++ +++ i  ak+ l+++ ++  e+ + +
  EPX73656.1 175 RISTLEACIGDAKEPLSMTVESCLEKLQAF 204
                 566677778888888888888888777665 PP

  == domain 3  score: 10.6 bits;  conditional E-value: 0.00014
        SOAR  44 kkkrssllgslrlahssslddvdk...kileakqaleevtkelkerqeRWqqieklc 97 
                 + k   ll++l ++h +   +  +   ++l+  ++l++++ ++ e+++RW+++e+++
  EPX73656.1 255 DEKEYALLSELLFVHLQDAGNYQAlvpALLKRLKSLHNLHLDTAETMNRWKNLENIL 311
                 566777788777777666665555111455666677888899************997 PP

  == domain 4  score: -1.5 bits;  conditional E-value: 0.82
        SOAR   4 peeLqqlLqlTyelElkylnkkkqeaek 31 
                 +++L+q+ ql  +lE++ + ++ +e  +
  EPX73656.1 315 AHSLNQWTQLLKHLETSSFPEQNMEEIQ 342
                 5678888888888888877766665544 PP

>> DUF1539  Domain of Unknown Function (DUF1539)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.89   2.7e+03     120     123 ..      98     101 ..      76     137 .. 0.56
   2 ?   -2.4   0.0       1.6   4.9e+03      11      26 ..     210     225 ..     187     236 .. 0.71
   3 ?   12.6   1.7   3.8e-05      0.11      13      66 ..     298     346 ..     281     351 .. 0.78

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.89
     DUF1539 120 dega 123
                 ++++
  EPX73656.1  98 ESTQ 101
                 2222 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.6
     DUF1539  11 LlenspqswkelnrkL 26 
                 L en+ ++w+e++++L
  EPX73656.1 210 LYENKLSTWEEIQKRL 225
                 4455666666666655 PP

  == domain 3  score: 12.6 bits;  conditional E-value: 3.8e-05
     DUF1539  13 enspqswkelnrkLekeikklaqnlrdeWkkilkylskkesseveseeaqalfr 66 
                 ++++++wk l++ Le+  ++l+q     W ++lk+l++ + +e+++ee q l++
  EPX73656.1 298 AETMNRWKNLENILESTAHSLNQ-----WTQLLKHLETSSFPEQNMEEIQTLSK 346
                 34566666666666666666666.....**********************9986 PP

>> BLOC1_2  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.1      0.23   6.9e+02      46      75 ..      86     114 ..      80     119 .. 0.48
   2 ?   -1.3   0.0      0.94   2.8e+03      69      80 ..     171     182 ..     158     207 .. 0.60
   3 ?    8.8   1.6   0.00065       1.9      11      73 ..     293     354 ..     284     356 .] 0.84

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.23
     BLOC1_2  46 lekkleklnekyeelqpylqqidqiekqvt 75 
                 ++++le+l+  ++e  + +q++d + + ++
  EPX73656.1  86 IRRELEDLWD-EAESTQEKQEVDSLSNLLD 114
                 4455555555.2333333444444444433 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.94
     BLOC1_2  69 qiekqvteLeea 80 
                 ++e ++++Le+ 
  EPX73656.1 171 DLESRISTLEAC 182
                 444444444443 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.00065
     BLOC1_2  11 leaeleatvedyklLeklNeaasekykklkdvaaslekkleklnekyeelqpylqqidqiekq 73 
                 l+ +++ t + +k Le++ e++++  +++++ +++le+++   ++  ee+q + ++i ++e++
  EPX73656.1 293 LHLDTAETMNRWKNLENILESTAHSLNQWTQLLKHLETSSFP-EQNMEEIQTLSKRIANLEES 354
                 566788899999999999999999999999999999987765.55589999999999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1148  (0.0640303); expected 358.6 (0.02)
Passed bias filter:                      552  (0.0307881); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 2628.87
//
Query:       EPX73657.1  [L=574]
Description: flap structure-specific endonuclease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-20   73.8   0.0    2.7e-20   72.5   0.0    1.7  1  XPG_I     XPG I-region
    9.6e-06   26.0   0.0    8.7e-05   22.9   0.0    2.6  2  XPG_N     XPG N-terminal domain


Domain annotation for each model (and alignments):
>> XPG_I  XPG I-region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.5   0.0     3e-24   2.7e-20       2      94 .]     110     196 ..     109     196 .. 0.93

  Alignments for each domain:
  == domain 1  score: 72.5 bits;  conditional E-value: 3e-24
                 HHT--EEE-SS-HHHHHHHHHHTTSSSEEE-SSSHHHHTT-SEEEESTT.ECECTT..EEECEEEEEEHHHHHHHHT--HHHHHHHHHHHCET CS
       XPG_I   2 lmgipyvvApgEAEAqcayLqkkglvdaviseDsDlllFGapkvlrnlskkkskkkkekekkkvevidlekvlkelgltreqlidlaillgcD 94 
                 l+g+++ +ApgEAEA+ca +q+ +lvd+v++eD+D+++FGa+kv+r      + k+      +v ++++e+++++l+++++ +i + +++g+D
  EPX73657.1 110 LFGMKVWDAPGEAEAECAKIQSLQLVDYVLTEDVDAFAFGATKVIRCSP--AERKS----LFNVRIYEMERITEKLDIDHSGVILIGLMRGGD 196
                 89********************************************986..33333....689****************************98 PP

>> XPG_N  XPG N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.0   9.7e-09   8.7e-05       1      91 [.       1      92 [.       1      98 [. 0.65
   2 ?   -1.1   0.0      0.29   2.6e+03      63      80 ..     312     329 ..     293     353 .. 0.66

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 9.7e-09
                X--TTHHHHHHHH-...GEEEEEGGGGTT....EEEEEEHHHHHHHHHHHSE.ETTEE-BS-HHHHHHHHHHHHHHHTTEEEEEEE--.S--GGGHHHH CS
       XPG_N  1 MGikgLlkllkeva...airsvsiealeg....kklaiDaslwlyrfliavreqlgnalentshlmglfsrllrlldfgikPifVFdg.kapdlkkeel 91
                MGi gL++  ++      + +vs +++       ++a+Da +w  ++      q  +  +n   l +lf+rl+ ll++gi+ ifVFdg ++p+ k++ +
  EPX73657.1  1 MGIPGLWDEFRDCFnetNLLEVSTNHWTTekrcLRIAVDAAIWSVQI------QASQGGTN-PALRTLFYRLCHLLEWGIHVIFVFDGpNKPPWKRNRH 92
                77888877666554344334444444433222336788888885554......44444455.7899**********************44567777655 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.29
                 HHHHHHHHTTEEEEEEE- CS
       XPG_N  63 srllrlldfgikPifVFd 80 
                 +  +++l+    PifVF+
  EPX73657.1 312 QGSIKFLNSIAYPIFVFE 329
                 5556666666789***97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (574 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       638  (0.0355848); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.24s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 4000.49
//
Query:       EPX73658.1  [L=436]
Description: ATPase expression protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.7e-20   70.7   0.0    6.5e-19   67.9   0.0    2.3  2  ATP13     Mitochondrial ATPase expression
    2.9e-15   56.1   0.3    1.1e-12   47.8   0.2    3.3  3  PPR_3     Pentatricopeptide repeat domain
     0.0029   17.8   0.1       0.17   12.2   0.0    3.0  3  PPR       PPR repeat
  ------ inclusion threshold ------
      0.018   14.6   0.0      0.033   13.7   0.0    1.4  1  DUF2982   Protein of unknown function (DUF2982)
      0.024   14.8   0.0       0.38   11.0   0.0    2.8  2  PPR_2     PPR repeat family
       0.04   13.6   0.0      0.092   12.5   0.0    1.6  1  PPR_1     PPR repeat
       0.18   12.0   0.4        2.9    8.1   0.1    2.2  2  DUF1542   Domain of Unknown Function (DUF1542)


Domain annotation for each model (and alignments):
>> ATP13  Mitochondrial ATPase expression
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.53   1.3e+03      45      65 ..     154     173 ..     143     184 .. 0.65
   2 !   67.9   0.0   2.5e-22   6.5e-19       2     109 ..     218     320 ..     217     325 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.53
       ATP13  45 ksdsplyPtselLkaivssfs 65 
                 k +++l+P+ + L  ++  ++
  EPX73658.1 154 K-KNELRPSLNYLNCVLGNYG 173
                 2.5667777777766665555 PP

  == domain 2  score: 67.9 bits;  conditional E-value: 2.5e-22
       ATP13   2 ellstvilslgrsgqlelieklikkvWgiidesgkleeketkvksdsplyPtselLkaivssfsynneiesAlklvdkfskkYpeielkkefWeellew 100
                 ++++ +i+ l+r+g++e+i +l+k++Wgi   +gk    e+ v++++++yPts+++ +++s+f+y ++i  A++l +++s+ Y+ i +++  W  +++w
  EPX73658.1 218 TTYDYLIVGLARDGKIEEIRDLLKRIWGI--GQGKPG--ERLVERNNSTYPTSHTILSVASAFGYLGDIPAAVELCKELSETYK-IRFSELAWCYIIYW 311
                 57899***********************6..466544..46778899*************************************.************** PP

       ATP13 101 aiiltskke 109
                 + +  ++k 
  EPX73658.1 312 STVAPKFKS 320
                 ***999875 PP

>> PPR_3  Pentatricopeptide repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.8   0.2   4.3e-16   1.1e-12       2      62 ..     114     174 ..     113     175 .. 0.98
   2 ?    3.3   0.0     0.035        90       7      40 ..     209     242 ..     205     244 .. 0.85
   3 ?    0.5   0.0      0.25   6.4e+02      18      40 ..     351     373 ..     349     378 .. 0.87

  Alignments for each domain:
  == domain 1  score: 47.8 bits;  conditional E-value: 4.3e-16
       PPR_3   2 ilremerkgikldvvtYthLLtayanagnkklalevlermkkkgikPtvvtyNailgvigg 62 
                 +l+++++ gi+l++ ++th+L+ +++ g +  a +v++ +kk+ ++P++ + N +lg +gg
  EPX73658.1 114 LLHDANELGIQLNIGDFTHMLRIAMYIGYEPVADKVIKTVKKNELRPSLNYLNCVLGNYGG 174
                 89*********************************************************97 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.035
       PPR_3   7 erkgikldvvtYthLLtayanagnkklalevler 40 
                  r+g+ +d  tY  L+ + a+ g+ + +   l+r
  EPX73658.1 209 PRNGFAPDSTTYDYLIVGLARDGKIEEIRDLLKR 242
                 5899**************9999998888777766 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.25
       PPR_3  18 YthLLtayanagnkklalevler 40 
                 Y + +  y+++g+  l+++v +r
  EPX73658.1 351 YQTVIAYYKKTGKSGLIERVCQR 373
                 889999*************9877 PP

>> PPR  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.0   6.8e-05      0.17       2      26 ..     219     243 ..     218     247 .. 0.90
   2 ?    1.8   0.0      0.14   3.5e+02       6      26 ..     272     292 ..     269     294 .. 0.87
   3 ?   -2.0   0.0       2.3     6e+03       3      16 ..     351     364 ..     350     375 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 6.8e-05
         PPR   2 tynslIsgycknGkleeAlelfkeM 26 
                 ty  lI g+++ Gk+ee  +l+k++
  EPX73658.1 219 TYDYLIVGLARDGKIEEIRDLLKRI 243
                 9999******************997 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.14
         PPR   6 lIsgycknGkleeAlelfkeM 26 
                 + s+++  G++  A+el ke+
  EPX73658.1 272 VASAFGYLGDIPAAVELCKEL 292
                 6689999***********997 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 2.3
         PPR   3 ynslIsgycknGkl 16 
                 y ++I  y k Gk 
  EPX73658.1 351 YQTVIAYYKKTGKS 364
                 77888888888875 PP

>> DUF2982  Protein of unknown function (DUF2982)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   1.3e-05     0.033      54      97 ..     366     403 ..     358     414 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.3e-05
     DUF2982  54 fldkispRlatklLleQrpLlllaakekaeeeeleedlledeky 97 
                 +++ ++ R +++lL++Qr L++   +      +++e+l+++ ++
  EPX73658.1 366 LIERVCQRWMKHLLHSQRTLTMKEKE------KQKEMLIKEISF 403
                 7899*****************99888......555555555555 PP

>> PPR_2  PPR repeat family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00015      0.38       1      25 [.     215     239 ..     208     242 .. 0.67
   2 ?   -0.3   0.0      0.49   1.2e+03       5      19 ..     350     364 ..     349     375 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00015
       PPR_2   1 pdvvtyNtlIsglckkgkveeAfkl 25 
                 pd+ ty  lI gl+++gk+ee  +l
  EPX73658.1 215 PDSTTYDYLIVGLARDGKIEEIRDL 239
                 5666777777777777777776666 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.49
       PPR_2   5 tyNtlIsglckkgkv 19 
                 +y t+I+++ k gk+
  EPX73658.1 350 IYQTVIAYYKKTGKS 364
                 599******999986 PP

>> PPR_1  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   3.6e-05     0.092       1      25 [.     211     235 ..     211     241 .. 0.94

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 3.6e-05
                 SS----HHHHHHHHHHHHHTS-HHH CS
       PPR_1   1 kGlkPdvvTYNtLIdGlCkaGrvde 25 
                 +G+ Pd  TY  LI Gl ++G+++e
  EPX73658.1 211 NGFAPDSTTYDYLIVGLARDGKIEE 235
                 5999******************997 PP

>> DUF1542  Domain of Unknown Function (DUF1542)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.1    0.0011       2.9      20      46 ..      93     119 ..      91     121 .. 0.87
   2 ?    1.6   0.0      0.11   2.9e+02      23      41 ..     382     400 ..     375     406 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0011
     DUF1542  20 InnnpnaTdeEKqaainkvnaalneai 46 
                  nn +++T+ EKq ai+ +n +l +a+
  EPX73658.1  93 FNNGNRLTEREKQTAIKILNLLLHDAN 119
                 68999************9999888886 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.11
     DUF1542  23 npnaTdeEKqaainkvnaa 41 
                   ++T  EK+++++ + ++
  EPX73658.1 382 QRTLTMKEKEKQKEMLIKE 400
                 5689*********988766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (436 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       655  (0.036533); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 3079.99
//
Query:       EPX73659.1  [L=572]
Description: nucleoside diphosphatase Ynd1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   1.3e-110  370.0   0.0   1.6e-110  369.7   0.0    1.0  1  GDA1_CD39  GDA1/CD39 (nucleoside phosphatase) family
  ------ inclusion threshold ------
      0.022   14.7   1.5      0.045   13.7   1.5    1.5  1  PsbI       Photosystem II reaction centre I protein (PSII 4.8


Domain annotation for each model (and alignments):
>> GDA1_CD39  GDA1/CD39 (nucleoside phosphatase) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  369.7   0.0  1.7e-114  1.6e-110       8     416 ..       3     439 ..       1     452 [. 0.90

  Alignments for each domain:
  == domain 1  score: 369.7 bits;  conditional E-value: 1.7e-114
   GDA1_CD39   8 ekygiviDAGSsgsrlhvykwkde...kesllqivkliee........vkklePGlSsfekkpeeaa.eylkpllelaeeviPeekrsetpvlikATAG 94 
                 ++ygi iDAGSsgsrl vy w+     +++   + +lie           k++PG+Ssfe+ p+e++ ++++ ll+ ae+viP++k+++tpv++ ATAG
  EPX73659.1   3 RNYGIFIDAGSSGSRLQVYSWTFSkdaDSKQKTSLPLIELgdgnegdwSIKVQPGISSFEQRPKEVGqKHIEKLLDHAEKVIPKDKHKSTPVFLSATAG 101
                 68*******************755444455555556666578889999999************9986279***************************** PP

   GDA1_CD39  95 lRLlkeekkekilkalrnklkklsefkved..qgiriidGeeEGiYgWiaiNYllGkfnkeapevskqetvgvlDlGGaStQiafepqeeseiaekved 191
                 +RLl+ ++++ki+ + ++ +k++++f   d  + ir+idG+ EG+YgW+a+NYllG+++       +++ +g+lD+GGaS+Qiafe++ e ++   +++
  EPX73659.1 102 MRLLPPKTQKKIMYNACQYIKDEYDFALPDceSMIRVIDGRAEGVYGWLATNYLLGNLDSP-----SESSTGFLDMGGASAQIAFEVSPEVQKD-YNDS 194
                 ***************************9999899************************998.....78999*****************555444.4445 PP

   GDA1_CD39 192 ie.elklqekledkkyklyvtsfLgyGanealrkklaklikkasee...vlkdpClprglektvevkdlefkqfaikgtgnyeqCrksikellnknakC 286
                 i   +    + e++ y l+vt++Lg+G+ +a +++l++li+++++    ++++pC+ rg +   +            gtg+ + C k ++ llnk+a+C
  EPX73659.1 195 IStVFLGLDNGEQRGYPLFVTTWLGFGTSQAYNRYLNSLIEENRSSpsdIIEEPCSLRGRQYSKD--GH-----SFLGTGDLQLCLKRTYTLLNKEAPC 286
                 542577777889999*************************987766666*********9765433..33.....3469********************* PP

   GDA1_CD39 287 kaeeClfngvfapsidl.lqklfgaseyfYtvsdvlklggekvklekltealrkfCkknweeikaeskkskeksisee....eaCfkgayvlslLhdGf 380
                   ++C f+g+  p+id+ +++++g se++Yt++dv+++gg++ ++ ++ +++  +C+++we++ +  ++++  s  +e    ++Cfk+++v++ Lh+Gf
  EPX73659.1 287 LRDPCGFDGISIPPIDFvNHEFIGVSEFWYTTNDVFDMGGSY-HFPNFYQKVADYCASDWESMLSRLNNNQLSSSTDEskleKLCFKASWVINFLHEGF 384
                 ******************************************.***********************99988777766669999**************** PP

   GDA1_CD39 381 dldktv...................eelqsvekiaekelgWtLGamlnllkalkl 416
                  ++kt                    ++++s+eki++ e++WtLG++l +++++++
  EPX73659.1 385 GFPKTNttdtddqrtdglevipayhSHFTSLEKIEQTEVSWTLGQVLLYSSNQQF 439
                 *****669*****************************************998877 PP

>> PsbI  Photosystem II reaction centre I protein (PSII 4.8 kDa protein)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   1.5     5e-06     0.045      13      35 ..     475     497 ..     471     498 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 5e-06
        PsbI  13 iffvslFvFGfLsnDPsRNPkRk 35 
                   f  lF+FGfLs   + NPkR+
  EPX73659.1 475 GVFLFLFIFGFLSYLLTNNPKRR 497
                 67999****************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (572 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       493  (0.0274974); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 4055.31
//
Query:       EPX73660.1  [L=359]
Description: elongator complex subunit Elp4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.4e-89  299.2   0.0    5.2e-89  299.0   0.0    1.0  1  PAXNEB    PAXNEB protein


Domain annotation for each model (and alignments):
>> PAXNEB  PAXNEB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  299.0   0.0   2.9e-93   5.2e-89       5     371 .]      17     359 .]      13     359 .] 0.86

  Alignments for each domain:
  == domain 1  score: 299.0 bits;  conditional E-value: 2.9e-93
      PAXNEB   5 ipGtrpSphdgqlltStGtpsLDklLgGGLplGsillieEdgttdfakvLlkyFlAeGvvqkhevlvlsldddpeewlreLPgpltdkeeekeqrkeek 103
                 ++G+r Sp+d++++tS+G++s+D++L GG+pl s+l++eEd +td+++vLlk+F+AeG++q+h v ++    + e w+r+LP++ +++ +++e++++e+
  EPX73660.1  17 PKGVRLSPKDARWITSSGSTSFDYYLLGGIPLRSLLVVEED-STDYSSVLLKFFAAEGLLQDHAVWLGPS--MGEPWFRQLPAENERAAKSEESKSSES 112
                 57**************************************9.89*********************99866..7***********986665555555554 PP

      PAXNEB 104 kaee.ekeendlkIAWRYekelpkvqseqasastesekfghqFdltkrle..seslseisftplddskkseeeekeslkespryssllnqiqqllkkes 199
                 ++ + + ++n +kIAWRYe+   +++++  + ++ +  f+h+Fdltkrl+  s++++++s+ pl+            + ++p + ++l++++++l++  
  EPX73660.1 113 SSFSnSAQQNRMKIAWRYEN---TSKTKVPAPDAIPPGFTHAFDLTKRLTigSKMMKAVSPFPLE------------TGSNP-FIPVLESLTRFLAS-- 193
                 44444779**********98...3444444555689*************9778899999999999............22478.**************.. PP

      PAXNEB 200 fsaptkknvlRivipsLlspllydyppeeskpedllkFLhsLrallr...ssnlvalitlplsliarssslvrkieqlvDtvieLesfagseketepal 295
                   +p +  v+R+v+psLlsp++  y+ ++++p+++++F+hsL +l++   s ++v+++++p++l++r+ + v ++e+l+ +v++L++f+ +e   +  +
  EPX73660.1 194 -LKPGT--VCRLVLPSLLSPAF--YSIRATQPQHFIRFIHSLSSLIKcttSVHIVCMCSVPSTLFSRDCEQVYWLESLASGVFSLHPFPITET-INGLA 286
                 .99999..**************..88*********************997779************************************9665.55556 PP

      PAXNEB 296 kseeyqGlLkihklpal..nelavgmpetedlafklsrkkfvIekfhLPPelsesekskscekesaksksskkksldF 371
                 +  ++qGl++ihklp     +   +++e+ dl+f++s+++f+Ie++ LPP ++e++++k+++   +++++ + ks++F
  EPX73660.1 287 T--QPQGLFRIHKLPLPlpFTNTDNSSEAGDLSFTVSKRRFTIEPWVLPPLDEEEPEKKTSN---KDKSQPSLKSIEF 359
                 5..8*********987411344444577************************9999665544...5566677777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (359 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       553  (0.0308439); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2769.74
//
Query:       EPX73661.1  [L=340]
Description: translation initiation factor eIF2B alpha subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-65  221.0   0.0    2.5e-65  220.5   0.0    1.2  1  IF-2B     Initiation factor 2 subunit family


Domain annotation for each model (and alignments):
>> IF-2B  Initiation factor 2 subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  220.5   0.0   1.4e-69   2.5e-65       4     281 ..      30     326 ..      27     327 .. 0.92

  Alignments for each domain:
  == domain 1  score: 220.5 bits;  conditional E-value: 1.4e-69
                 SHHHHHHHHHHHHHHHHHHCCCSTHHHHHHHHHHHHHHHHTSSTS-HHHHHHHHHHHH.HHHCCTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       IF-2B   4 GspaiaiaalevllevikdaktskvaeLkeelrkaidlLkkarPtavslgnairrllk.eiselksssdvkeakksliekikelikeieeadekigdia 101
                 +++++ +aa+e+l + ++++++++  e++  l++  + Lk+   + +sl+  ++ + +   ++l++  d +++k +l+e+ k +i+++++ ++ i++ +
  EPX73661.1  30 PEITMPVAAIEALVQLLSRSQAKTISEFMDILQSGSNALKNGVENNISLSAGCDIFQRfVTRSLHDVGDFEQCKRHLVENGKLFIQRARACRQTIANLG 128
                 67899*****************************************************7667899********************************** PP

                 HTTC-TTEEEEEES--SHHHHHHHHHHHTTEEEEEEEEEXTTTTHHHTHHHHHHHTTXEEEEEEGGGHHHHHHCTESEEEEEXSEEETTSEEEEETTHH CS
       IF-2B 102 aelikdgdtilTicnsktvlevlraaakekkkfkVivvEsrPrlqGrltakeLvqagipvtlitdsavayvmseevdkvivGAdrilenGaiankiGTs 200
                   li dg++ilT++ s+ v ++l aaak + +fkV+v+EsrP+ +G l+a +L++a ip+ +++dsav+++m++ vd v+vGA++++enG+++n+iGT 
  EPX73661.1 129 YPLIRDGNVILTHGFSRGVAAILLAAAKRHVRFKVFVTESRPSGSGCLMADTLRKACIPTCMVLDSAVSFTMNR-VDLVLVGAEGVVENGGLINQIGTF 226
                 **************************************************************************.************************ PP

                 HHHHHHHHTTXEEEEEXXGGGBESTSSSGGGSSXXBEXTHHHHEETTEESSTT......................TEEEEEBSEEEEEGGGXSEEEETT CS
       IF-2B 201 slAvlAkefnipvlvvaeslkfservqldedifieerdpeellnitgeriaee......................elkvvnpafDvtPpelItliITev 277
                 +lAv Ak+++ p+++vaes+kf+++++l++ ++     ++ +l ++++ ++                        e    np+ DvtPpe+++++IT++
  EPX73661.1 227 QLAVFAKHAHKPFYAVAESHKFVRMFPLSQYDIP---FSQPILEFDDPSPETLgpirdivptpsdaihnelimneEQIRNNPTLDVTPPEFVSGLITDL 322
                 *****************************98773...334444444444422255566666677*********97555679****************** PP

                 EEEX CS
       IF-2B 278 Gvlp 281
                 G+++
  EPX73661.1 323 GIID 326
                 *986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (340 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       344  (0.0191868); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2457.34
//
Query:       EPX73662.1  [L=1045]
Description: silencing protein Rik1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.8e-30  104.6   1.9    4.8e-30  104.6   1.9    2.6  3  MMS1_N    Mono-functional DNA-alkylating methyl methanesulfon
    3.7e-19   69.2   2.7    1.2e-18   67.6   0.3    2.4  2  CPSF_A    CPSF A subunit region


Domain annotation for each model (and alignments):
>> MMS1_N  Mono-functional DNA-alkylating methyl methanesulfonate N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.6   1.9   5.3e-34   4.8e-30       1     488 [.      73     512 ..      73     513 .. 0.82
   2 ?   -2.1   0.0      0.12   1.1e+03     441     489 .]     745     795 ..     733     795 .. 0.76
   3 !    3.0   0.1    0.0036        32     208     292 ..     834     912 ..     814     922 .. 0.78

  Alignments for each domain:
  == domain 1  score: 104.6 bits;  conditional E-value: 5.3e-34
      MMS1_N   1 DlLvvgsdsgelvflsynpeknqfetvhs..hetlgksgsrrsqpGqylavDPkgraiavsayekvflvyslkkkeilnrealllssplearksegvil 97 
                 D+L+v+++   +++l+++ + ++ +  h   + +++ + +r+  +  +++vD k r+i +s+ + ++l++++ ++e ++++  ++++ + +  +   i 
  EPX73662.1  73 DYLFVVLQDDTYFTLYWDEDFQKANIDHPplCYRISFPWNRF--TKSHCLVDKKMRMIFLSIDDVFMLCINVLSAEERQKSGCSIDDGFPISFPVNPIQ 169
                 9******************76655555542244566655555..567*************9999999999777733222222333567777899999** PP

      MMS1_N  98 smvFldpgykeednpiialleqdrrgkteltlyewdlglnlvrkisktsepkk..nldsganlLiplpkpggvlVcgetiitykdildqedirkkswar 194
                 +++ l+++      p++++l+++  +   +t + +d  +++ ++  +     +        + +ip  k  g+lV  + +i ++ +++   i++  ++ 
  EPX73662.1 170 DICLLNFPK----IPTLVVLHSEGID-SAITAFPIDVESKNLENGIRL--FDSvlP-----SKIIPFGK-RGLLVLDKRAIHCFYRGG---IVT--IKS 250
                 *******99....7******976665.899999999998888876653..322332.....58****99.*********999999977...655..899 PP

      MMS1_N 195 PrrekatnfvawekldsfffllatedGdLylleiekdedsgkvvtsislkyf..dtvsvasalvilksgfLfvasefGdgqlyqieargeddknleliq 291
                 P r     +++ e +d  +f+l++ +G+ y +  +   +   +  ++sl+++    v   ++lv ++++ Lf++s+ + ++l+ i + ++         
  EPX73662.1 251 PSRV-YDHWISLEGQD-NHFILCDVNGNFYAIYSSVLAG---KLWNLSLEKLniSPVTFVTSLVSINDDLLFIGSQGNCSKLISIPNMSD-------TF 337
                 *998.66678888888.9****************77544...46667777743333555699*************************875.......46 PP

      MMS1_N 292 tldNlaPilDfkvvkesdlasegqdqiytcsGagkrgsLrelRsGieveelavseepgspitgvWtlklssedeyddylvlSfvneTlvlsidgdgeve 390
                 tl+Nl+P+ D+++       + + + +++c G++k+ s+ + ++ + ++ l+    + s i  v +l++       + l++ fv+eTlv+ i ++    
  EPX73662.1 338 TLPNLGPVHDINIY---P--DHQGQSMFVCAGSFKNASILHYKHALFTNSLGFF--ECSDIIRVMVLSS----HVAEKLFIIFVEETLVFNI-KE---- 420
                 9************9...3..22458***************************75..4578999999995....56688**************.43.... PP

      MMS1_N 391 evt.e.dsglllsvpTLaagnlgdgslvQVtpngirliradkrvsewkppngksiiaaaangeqllvalsgrelvyfeldlieevekkdleslsevscl 487
                 +++ e ds l+++++T+a + ++ ++++QVt+++  +++++k++   k+   ++i++a++++  ++++l g elv ++  ++e +++ +++  se+scl
  EPX73662.1 421 DIQlElDSELSINERTIALSGID-DQFIQVTTKSLCIYDSKKIL---KVIHLEKITNATCYKGYSAIVLGGLELVIYQR-DVE-MSRIKFD--SEISCL 511
                 44446689**************7.8*****************99...4555559*****************99999998.777.5999999..*****9 PP

      MMS1_N 488 s 488
                 +
  EPX73662.1 512 E 512
                 7 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.12
      MMS1_N 441 ksiiaaaangeqllvalsgrelvyfel..d..lieevekkdleslsevsclsl 489
                 ++i++a  n++ + +  s+++l+ ++   d   ++ v++ +l+    vsclsl
  EPX73662.1 745 DTIVVAVNNHRVVDLLPSNGKLLLYRFmpDlsALTCVNSIQLS--AAVSCLSL 795
                 4788877788888888888999988774436688889999999..*****996 PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.0036
      MMS1_N 208 klds.fffllatedGdLylleiekdedsgkvvtsislkyfdtvsvasalvilksgfLfvasefGdgqlyqieargeddknleliqt 292
                 ++d+ +++l+++  G ++ l +e+ +  +   + +++++     + +al++ +++++f as++G  +++++e++  ++++++l+ +
  EPX73662.1 834 TVDKeQNILIGDVVGFITILRLENYT--FVMYSRCNIGE----RILTALCYERNKYIF-ASDSGVMHIVRLENIAGSKEQMRLVAE 912
                 4455579***************6643..46677777777....7788****9999977.799999999999888766667777665 PP

>> CPSF_A  CPSF A subunit region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.1     0.024   2.2e+02      67     120 ..     414     463 ..     408     500 .. 0.84
   2 !   67.6   0.3   1.3e-22   1.2e-18      40     288 ..     725     978 ..     704    1006 .. 0.81

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.024
                 EEEEEEE-SS--EEEEEEEEEEEES----EEEETTEEEEE-SSEEEEEEE-TTS CS
      CPSF_A  67 lvfeiievpetnrkLklvhkeevkgavtalaefqGrllvgvgqkvrvydlgedk 120
                 lvf i+e    + +L+l  +  +++   al+++ ++++    +++++yd ++  
  EPX73662.1 414 LVFNIKE----DIQLELDSELSINERTIALSGIDDQFIQVTTKSLCIYDSKKIL 463
                 7899999....47999********************************988755 PP

  == domain 2  score: 67.6 bits;  conditional E-value: 1.3e-22
                 T...............---B--EEEEEEE---SSS--E.EEEEEEEEEE-SS--EEEEEEEEEEEES----EEEETTEEEEE-SSEEEEEEE-TTS-EE CS
      CPSF_A  40 t...............kekkellvVGtafnlgedpaarsGrilvfeiievpetnrkLklvhkeevkgavtalaefqGrllvgvgqkvrvydlgedktLl 123
                                 k +++ +vV++   +  d+ +++G++l++++  +      L+ v + ++  av++l+ ++  +++++g  v ++d+ + k + 
  EPX73662.1 725 LeryefplydrceeilKIEDDTIVVAVNNHRVVDLLPSNGKLLLYRFMPD---LSALTCVNSIQLSAAVSCLSLYEKCFIASFGHFVGLFDILNGK-ME 819
                 2344444444444444344789*************9999**********6...679****************************************.77 PP

                 EEEEEE-SS-EEEEEEETT.EEEEEESSS-EEEEEE-SSS--EEEEEEESS---EEEEEEE--SSSEEEEEETTSEEEEEE--TTSGGGTTTT.EEEEE CS
      CPSF_A 124 rkafldtqlyvvslkvlgn.riivgDlmkSvtfveydeenyklilfardtqkrwvtaaeflvdgedtvlvaDkfgnlfvlrydpeasessdgdprleer 221
                  k  + ++ +++ ++v ++  i++gD++  +t+++   eny++++ +r      + +a +  +  + ++ a ++g ++++r++ +   s ++  rl   
  EPX73662.1 820 LKTKFCVGNLITHITVDKEqNILIGDVVGFITILRL--ENYTFVMYSRCNIGERILTALCY-ER-NKYIFASDSGVMHIVRLE-NIAGSKEQM-RLVAE 912
                 666666999999999987779**************9..99******************999.77.688888889*********.777777777.***** PP

                 EEEE-SS----E...EEEE...SSS--S.-EEEEEE-TTS-EEEEEE.--HHHHHHHHHHHHHHHHHS-- CS
      CPSF_A 222 aefhlgeivtslrkgslvp..geaesss.spqllyatldGsigllvPliseeeyrrlqaLqqqLrkelkh 288
                 +++ l++ vt+++  + vp  g +++ + +p+l ++t +G+ig +++ ++ + ++ +++L +++r+ + +
  EPX73662.1 913 TQYRLHDKVTRFCL-NTVPqnGVSSK-MlEPRLYFGTEKGAIGSIYS-LNSN-INEFHELAKKIRQLELS 978
                 ************33.33445433333.36******************.7777.78899999999987655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1045 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       512  (0.0285571); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.74u 0.31s 00:00:01.05 Elapsed: 00:00:00.47
# Mc/sec: 6636.93
//
Query:       EPX73663.1  [L=476]
Description: alpha-amylase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.6e-58  196.5   0.4    1.4e-57  195.8   0.4    1.3  1  Alpha-amylase   Alpha amylase, catalytic domain
    0.00059   19.0   0.3      0.001   18.2   0.3    1.3  1  GHL10           Glycosyl hydrolase-like 10
  ------ inclusion threshold ------
      0.011   14.9   0.0      0.019   14.1   0.0    1.3  1  hDGE_amylase    Glycogen debranching enzyme, glucanotransfera
      0.048   11.8   0.0      0.075   11.2   0.0    1.2  1  Glyco_hydro_70  Glycosyl hydrolase family 70
       0.14   11.0   0.0       0.22   10.4   0.0    1.2  1  Aminotran_5     Aminotransferase class-V


Domain annotation for each model (and alignments):
>> Alpha-amylase  Alpha amylase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  195.8   0.4   3.8e-61   1.4e-57       1     337 []      53     354 ..      53     354 .. 0.87

  Alignments for each domain:
  == domain 1  score: 195.8 bits;  conditional E-value: 3.8e-61
                    --CHHHHCTCCCCCCCT-SCEEE-B-CE.......-S-TTTTSS-SCECCE-CCC--CCCCCCHHHHHHCTT-EEEEEE--SC--TTSCCCHCCHH CS
  Alpha-amylase   1 GDLkGiiekLdYlkeLGvtaiwlsPifk.......spqadhgYdiadytkidpefGtnedlkeLiskahekgikvilDlVvNHtsdehewfkeslk 89 
                    G++kG+++kLdYl+ LG ta+w+sPi+k       + + +hgY+++d+tk++ +fGt edl+ L++++h++g+  ++D+VvNH++   + + ++ +
     EPX73663.1  53 GTWKGVTKKLDYLQLLGCTAVWISPIVKniegqtgYGEPYHGYWTQDFTKLNSHFGTSEDLQDLVNNLHKRGMLCMVDIVVNHMAHPGKEAVDYSQ 148
                    99*********************************7778**********************************************98886665555 PP

                    STT.SGGGCCC-E......ESS-STTC-TTTTCSCEECTTTTCEEESSS-TTS-BB-TTTCCCCCCCCC.CCCCCCTTT-SEEEETTCCCTTTCCC CS
  Alpha-amylase  90 kkg.epkrdyyiwkegkeekeppnnwkslfdgsaweydekaqeyylhlflkklpdLnteneevrkelkd.vvkfwlekgidGfRlDvvkhvskvea 183
                     +  ++ +d++ wk       ++ n++      ++  + + +      ++ +lpd++te+++vrk  ++ ++ ++   + dG+R+D++khv+k   
     EPX73663.1 149 FTPfNQANDFHPWKYI-----QDYNNQ-----DEV-VSGWLG-----DDCVNLPDIKTEKSSVRKFFQKwISDLVNTYKFDGMRIDTAKHVEK--- 225
                    3331346677777533.....333322.....222.234444.....49********************8888999999**************... PP

                    CHCCHCCHHHHHHHHHHHTCCGTT-EEEEE-TT-SCCCHCCCC-CGG-SICECCITTCGGGCC-CTSTTSB-SS-HHHHHHHHHHHHHHS-CCCTT CS
  Alpha-amylase 184 lesngeflheftqalnetvasrkevmtvgEvssdasedlrvyttearlelemvldfphldvaqkakikeqlksisakklkellkkwlkaleeaaee 279
                          f   f + +n        ++  gE+++++   ++v ++++++ +   ++fp ++  ++a+ ++   +  ++ +++ + +++++  +  + 
     EPX73663.1 226 -----SFYPPFIKSAN--------IFAAGEIFHGNP--KYVGVYQDYMPSV--INFPLYYQLREAF-SYPRIP-MFEYYQKGVLDIRHNFRD-PTI 301
                    .....*********99........899******888..5999******999..******9999999.344444.477788889999999998.999 PP

                    CEEES--TTS--HHHHTTSSTTTTHHHHHHHHHCCCTSSSEEEEETTCCCT----STT CS
  Alpha-amylase 280 avtflgnHDqeRilsrlgddsaeaekklklaaillltlrGvpviYyGeEigmtggkdp 337
                      +fl+nHD +R+ s ++d++      + +a ++++ ++G+pviYyG+E+ ++gg+dp
     EPX73663.1 302 LCNFLENHDVPRFFSQTQDNA-----LALNAIAATIFSDGIPVIYYGQEQRFSGGNDP 354
                    *********************.....67888888999*******************97 PP

>> GHL10  Glycosyl hydrolase-like 10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.3   2.8e-07     0.001      39     169 ..      78     226 ..      55     236 .. 0.71

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 2.8e-07
       GHL10  39 qvkn.dgtalypsavak.wselktgkkgedpGrDvLaevideahkrnlkvlaWFevglnak............elselvkahPasltvqkrdevk.tse 122
                  vkn +g++ y   +   w +  t+ + +    + L++++++ hkr++  +    v  +a+            + ++  + hP++   q  ++   ++ 
  EPX73663.1  78 IVKNiEGQTGYGEPYHGyWTQDFTKLNSHFGTSEDLQDLVNNLHKRGMLCMVDIVVNHMAHpgkeavdysqftPFNQANDFHPWKYI-QDYNNQDeVVS 175
                 56654566666665555466666666665556788*************999887666555569999999999999**********55.44333330333 PP

       GHL10 123 saagerlwlnPli....PevqdfitklvvevvkrYdvDgvqlDDyfylpes 169
                 +  g+  +  P i      v++f  k + ++v+ Y  Dg+++D    + +s
  EPX73663.1 176 GWLGDDCVNLPDIktekSSVRKFFQKWISDLVNTYKFDGMRIDTAKHVEKS 226
                 4567777776765222267***********************976665555 PP

>> hDGE_amylase  Glycogen debranching enzyme, glucanotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   5.2e-06     0.019      26     106 ..      60     139 ..      48     150 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 5.2e-06
                   HHHHHHHHTT--EEEES--EEE-TT--TTSEEEEEEE-TTT-.....SSC.HHHHHHHHHHHHHH--EEEEEE--SEEETT CS
  hDGE_amylase  26 kvlkeikekgYnmiHftPlqelGesnSpYSiadqleldkelfeekdkeekeedveklvkklekeygllsltDvVlnHtann 106
                   k+l+  +  g + +  +P+ +  e +  Y    +  + +++ + +++  + ed+++lv++l+k  g+l+++D+V nH a+ 
    EPX73663.1  60 KKLDYLQLLGCTAVWISPIVKNIEGQTGYGEPYHGYWTQDFTKLNSHFGTSEDLQDLVNNLHK-RGMLCMVDIVVNHMAHP 139
                   5566666666677777777777777777777777777777776667777889********986.69************985 PP

>> Glyco_hydro_70  Glycosyl hydrolase family 70
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   2.1e-05     0.075     634     683 ..     104     152 ..      87     164 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 2.1e-05
  Glyco_hydro_70 634 pnkyGtaddlvdaikalhksGikviadwvpdqiynlpekevvtatrvndf 683
                     ++++Gt++dl d +  lhk+G+  + d v + + + p+ke v  ++   f
      EPX73663.1 104 NSHFGTSEDLQDLVNNLHKRGMLCMVDIVVNHM-AHPGKEAVDYSQFTPF 152
                     6789**************************998.6899999877665555 PP

>> Aminotran_5  Aminotransferase class-V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   6.1e-05      0.22     146     182 ..     101     137 ..      99     146 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 6.1e-05
                  ESBETTTTEB--HHHHHHHHHHTT-EEEEE-TTTTTT CS
  Aminotran_5 146 thvsnvtGtiqpveeigklakkkgalvlvDaaqavgh 182
                  t  ++  Gt +++++++++++k+g+l +vD + + + 
   EPX73663.1 101 TKLNSHFGTSEDLQDLVNNLHKRGMLCMVDIVVNHMA 137
                  788999************************9977665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (476 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       530  (0.029561); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.73u 0.37s 00:00:01.10 Elapsed: 00:00:00.59
# Mc/sec: 2427.35
//
Query:       EPX73664.1  [L=549]
Description: protein phosphatase regulatory subunit Par1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   6.7e-173  575.4   5.5   8.9e-173  575.0   5.5    1.1  1  B56             Protein phosphatase 2A regulatory B subunit (
    0.00036   20.5   5.5      0.069   13.0   0.2    3.0  3  Sec7_N          Guanine nucleotide exchange factor in Golgi t
  ------ inclusion threshold ------
      0.011   16.1   0.8      0.055   13.9   0.0    2.4  2  DUF2122         RecB-family nuclease (DUF2122)
      0.057   13.6   0.3       0.23   11.7   0.0    2.2  2  Suppressor_P21  RNA silencing suppressor P21 C-terminal domai


Domain annotation for each model (and alignments):
>> B56  Protein phosphatase 2A regulatory B subunit (B56 family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  575.0   5.5    2e-176  8.9e-173       1     415 []     108     517 ..     108     517 .. 0.98

  Alignments for each domain:
  == domain 1  score: 575.0 bits;  conditional E-value: 2e-176
         B56   1 lpslkdvppeereelflkklkqCsvvfdFndpssdlkekeiKretLkelveyvsnnrkkslkilteevyeeivkmisaNlfRplppsksnlldeaadpe 99 
                 lps++dvp    ++l l+kl+qC+v+fdFndps+dl  ke+Kre+L++l+++vs +++     ++e++y+ iv+m+s+N+fRplpp +sn+l e  d+e
  EPX73664.1 108 LPSFSDVPITAWHSLALEKLEQCCVLFDFNDPSTDLYGKEVKREALQDLIDLVSVRKE----AIDESLYPSIVHMFSVNVFRPLPP-PSNPLGEVVDLE 201
                 799**************************************************99666....***********************8.5556555579** PP

         B56 100 edepvlepawpHlqlvYeillrfvespefdakvakkyidqsFvlkllelfdseDprERdylktilhriygkfldlrsfirkainniflrfiyeterhng 198
                 edep le+awpHl+lvY+++lrf+esp  ++++ak yi+q+F+ kll lfdseDprERd+lktilhriygkfl+lr+fir++inn+fl++iye+e+++g
  EPX73664.1 202 EDEPALEVAWPHLHLVYDFFLRFFESPSLNTSIAKVYINQKFIRKLLVLFDSEDPRERDFLKTILHRIYGKFLSLRAFIRRSINNLFLQYIYENEQFSG 300
                 *************************************************************************************************** PP

         B56 199 iaelLeilgsiingfalplkeehkkflervllpLhkvkslslyhqqLaycvvqfiekdpklaeevikgllkyWPitnsqKevlFLneleeileviepee 297
                 iaelLeilgsiingfalplkeehk fl+rvl+p hk+ksl+ly++q+ay +vqf+ekd++++eevi gll+yWP+ ns KevlFLnele+i+ev+ep+e
  EPX73664.1 301 IAELLEILGSIINGFALPLKEEHKVFLSRVLIPMHKAKSLALYYPQIAYGIVQFVEKDSSVTEEVILGLLRYWPKVNSGKEVLFLNELEDIVEVMEPSE 399
                 *************************************************************************************************** PP

         B56 298 fqkilkplfkrlakcissphfqVaeralylwnnekivnlisenseeilpilfpaleknskkHWnktvrglalnvlkllmeldpelfdecaakykeekek 396
                 f ki++plf+ la+ciss++fqVaeraly++nn+++v+l++en ++ilpi++pal+++sk+HWn+ ++++++nvlkl+m++++ lfde+ ++y+   ++
  EPX73664.1 400 FLKIQIPLFQKLASCISSQNFQVAERALYFFNNDYFVHLVEENVDVILPIIYPALFEISKSHWNRVINSMVCNVLKLFMDINSSLFDEVDTEYSVAINR 498
                 *************************************************************************************************** PP

         B56 397 ekekkkkreekWkkieeaA 415
                 +++++++r+e+W  +e+ A
  EPX73664.1 499 KEKEEQERKERWLILESIA 517
                 ************9999876 PP

>> Sec7_N  Guanine nucleotide exchange factor in Golgi transport N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.2   1.5e-05     0.069      55     118 ..     274     336 ..     260     366 .. 0.86
   2 !    8.6   0.5   0.00036       1.6      60     127 ..     402     466 ..     381     481 .. 0.82
   3 ?    2.3   0.1     0.032   1.4e+02      59     131 ..     444     515 ..     431     517 .. 0.60

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.5e-05
      Sec7_N  55 pellqllkqklcplLlknlsespsfpvferslrivllLlkkfrseLktEievflsllililles 118
                  +l + ++  + +l l+++ e+++f+ +  +l+i+  +++ f   Lk+E +vfls ++ ++  +
  EPX73664.1 274 LSLRAFIRRSINNLFLQYIYENEQFSGIAELLEILGSIINGFALPLKEEHKVFLSRVLIPMH-K 336
                 567788999***********************************************999983.3 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00036
      Sec7_N  60 llkqklcplLlknlsespsfpvferslrivllLlkkfrseLktEievflsllilillesdsslwqrvl 127
                  ++  l++ L  ++ +s++f+v er+l  + +   +f + +++ + v+l  ++  l+e ++s w+rv+
  EPX73664.1 402 KIQIPLFQKLASCI-SSQNFQVAERALYFFNN--DYFVHLVEENVDVILPIIYPALFEISKSHWNRVI 466
                 468889999*****.9********98877765..8899999999**********************96 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.032
      Sec7_N  59 qllkqklcplLlknlsespsfpvferslrivllLlkkfrseLktEievflsllililles.dsslwqrvlaLei 131
                 +++   + p+L+ +  +s+  +v+  ++  vl L+ +  s+L +E+ +  s+ i +  e+ +++ ++r+l+Le+
  EPX73664.1 444 DVILPIIYPALFEIS-KSHWNRVINSMVCNVLKLFMDINSSLFDEVDTEYSVAINRK-EKeEQERKERWLILES 515
                 444444556666666.55655555555555666777777777777777777777777.4436666777777776 PP

>> DUF2122  RecB-family nuclease (DUF2122)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   1.2e-05     0.055      17      44 ..     377     404 ..     374     431 .. 0.85
   2 ?   -0.8   0.2      0.45     2e+03      52      87 ..     499     534 ..     488     545 .. 0.66

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.2e-05
     DUF2122  17 klgksllvlpdlkDalellkpekvllls 44 
                  +gk++l+l++l+D++e+++p++ l ++
  EPX73664.1 377 NSGKEVLFLNELEDIVEVMEPSEFLKIQ 404
                 579******************9987665 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.45
     DUF2122  52 leeeeleekgrvllvfsgadegfskkelelgetvkv 87 
                 +e+ee e+k+r l++ s a e+ sk ++++ + v+ 
  EPX73664.1 499 KEKEEQERKERWLILESIAIENASKMNISKNTSVQT 534
                 334444678888888877778888887777776653 PP

>> Suppressor_P21  RNA silencing suppressor P21 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   5.1e-05      0.23      20      50 ..      71     103 ..      70     106 .. 0.88
   2 ?   -3.3   0.1       2.4   1.1e+04      52      61 ..     524     533 ..     519     544 .. 0.48

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 5.1e-05
  Suppressor_P21  20 initpttfeealsesmrkvvk..tvLqhlSsel 50 
                     i +tpt ++e+l e++r v+k   +L h+S+++
      EPX73664.1  71 IDTTPTPRDEILLENVRTVRKqrSSLYHISENR 103
                     579****************985569*****987 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 2.4
  Suppressor_P21  52 levsentFkq 61 
                     +++s+nt  q
      EPX73664.1 524 MNISKNTSVQ 533
                     4444444322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (549 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1586  (0.08846); expected 358.6 (0.02)
Passed bias filter:                      608  (0.0339115); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.73u 0.35s 00:00:01.08 Elapsed: 00:00:00.50
# Mc/sec: 3275.86
//
Query:       EPX73665.1  [L=876]
Description: condensin complex non-SMC subunit Cnd3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-75  254.4   4.9    1.3e-75  254.4   4.9    2.9  4  Cnd3       Nuclear condensing complex subunits, C-term domain
    3.3e-08   33.8   3.5    6.6e-05   23.2   0.4    3.7  3  HEAT_2     HEAT repeats
    1.5e-05   24.8   6.8       0.32   11.4   0.1    6.2  6  HEAT       HEAT repeat
  ------ inclusion threshold ------
      0.063   13.3  11.0      0.066   13.3   0.5    4.5  4  Cnd1       non-SMC mitotic condensation complex subunit 1
       0.66   10.1   5.5        1.6    8.9   1.8    2.4  2  CPSF100_C  Cleavage and polyadenylation factor 2 C-terminal
        2.4    8.0  16.8       0.45   10.4   8.2    2.6  2  DREPP      DREPP plasma membrane polypeptide


Domain annotation for each model (and alignments):
>> Cnd3  Nuclear condensing complex subunits, C-term domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       0.5   1.5e+03     111     146 ..      72     106 ..      34     122 .. 0.72
   2 ?   -2.5   0.0      0.77   2.3e+03      13      51 ..     108     146 ..      99     167 .. 0.82
   3 ?   -1.0   0.1      0.26   7.9e+02      53      99 ..     394     439 ..     354     477 .. 0.68
   4 !  254.4   4.9   4.3e-79   1.3e-75       1     294 []     487     763 ..     487     763 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.5
                 ........HHHHHHHHHHC-TT-HHHHHHHHHHHHH CS
        Cnd3 111 eeesessksllkllykaLdsednpelqaiaaeglcK 146
                 ++e++  +++lk ++k Ld + ++ +++  ++ +++
  EPX73665.1  72 DPETDIAQPVLKHVLKGLDAK-DKTVRFRSCQVVAR 106
                 333355667888888888755.47777777777666 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.77
                 --S-TTSCCHHHHHHHHTHHHHHC-SSHHHHHHHHHHHH CS
        Cnd3  13 vsssleenpsleslleslilpavrskeaairelglkcLg 51 
                 ++s++e + ++ s+l + +l  v  +ea +r +++ +L+
  EPX73665.1 108 INSVKEIDDDIYSILREKLLDRVVDREAFVRLEAVIALS 146
                 566778889999999999999999999999999998886 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 0.26
                 HHTT-HHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHH-CGGG CS
        Cnd3  53 fclldkklakenlklflqalskgneelkiialkaifDllllhglevl 99 
                  +ll+++l   +++l+ +  s+ ++  +   +++i+D++    l+  
  EPX73665.1 394 TSLLSENLISLHVELLKKLCST-ETDFCSLLVEIITDMFEQGHLDPT 439
                 4666667777777777666664.577777777777777755444444 PP

  == domain 4  score: 254.4 bits;  conditional E-value: 4.3e-79
                 HHHHHHHHHHHT--S-TTSCCHHHHHHHHTHHHHHC-SSHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHH-CGGG CS
        Cnd3   1 rcLaitqelLenvsssleenpsleslleslilpavrskeaairelglkcLglfclldkklakenlklflqalskgneelkiialkaifDllllhglevl 99 
                 rcL+ +q l+en+ss+l+en  +++ll+sli+pav+s++ +ire+gl+cL+l+cll+ +la en+ l l++++kg ++lkiial+ ++D++l hg e +
  EPX73665.1 487 RCLSYVQALFENISSPLNENLYVVDLLKSLIIPAVKSHDLPIREKGLECLSLVCLLNSDLAYENIALYLHCFEKGTDNLKIIALRTLTDIFLQHGKERF 585
                 8************************************************************************************************** PP

                 GGGHH..............HHHHHHHHHHC-TT-HHHHHHHHHHHHHHHHHH--SHHHHHHHHHHHHH-GGGTT-HHHHHHHHHHHHHHHCC-HHHHHH CS
        Cnd3 100 dkekkedsdeeeeesessksllkllykaLdsednpelqaiaaeglcKLllagiltdselLsrLvllyFnpeteenqrLrQcLsvffpvYafsspknqel 198
                 ++ ++              ++ +ll++ L + d+pelq++ ae+++KLl+  ++ d+ +L+ L++ yF+p+t en +LrQ+L++ffpvY++  p+nq++
  EPX73665.1 586 SAFDE--------------QFSSLLLESLFNIDEPELQTLSAEAIAKLLVIVHYRDEVFLKPLIIQYFEPNTVENYALRQVLGYFFPVYVYGLPENQWK 670
                 77665..............9**********9999**********************99***************************************** PP

                 HHHHHHHHHHHHHHHCH--...-SHCHHHHHHHHHHHHT-GGGS---------TT.....--HHHHHHHHHHHHCCCS-THH.HHHHHHHHHH--- CS
        Cnd3 199 laeiflptlrtllnapeesplaeeevspskvleqlvdltdprklvnkteeeesksesekeeelhldlaleilkelekkeskeekkaliklLsklei 294
                 + e+f++tl  ll+ ++++ +++ ++s s+++ q++d+td++kl +k+ ++es++  ++ +++hl+la +i + l + ++ +e+k++++lL+kl+i
  EPX73665.1 671 VVEVFCDTLLNLLEVYRDIDEDDLQLSTSQIALQMLDWTDNEKLFEKKVNSESST--AN-QKIHLQLANNIFESLPRASEGKERKLIVSLLGKLNI 763
                 *******************999***********************9977765544..33.479*****************778***********97 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.4   2.2e-08   6.6e-05       2      87 ..      83     183 ..      82     184 .. 0.78
   2 !    9.0   0.2   0.00061       1.8      33      84 ..     228     282 ..     190     285 .. 0.75
   3 ?   -2.4   0.0       2.2   6.6e+03      12      34 ..     746     768 ..     735     769 .. 0.76

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 2.2e-08
      HEAT_2   2 daLlqalendpdpevrraairaLgrignp......ea....lpaLvellededpavRraaaeaLgaig......dpealpaLkellddddddvvReaAa 84 
                 ++ l+ l + +d+ vr + +++ +r  n       ++    ++ L++ + d ++ vR +a+ aL++++      ++++ + L+ ll++d++++vR+a++
  EPX73665.1  83 KHVLKGL-DAKDKTVRFRSCQVVARVINSvkeiddDIysilREKLLDRVVDREAFVRLEAVIALSRLQedtqeeENDVRNMLLFLLQNDPSPDVRRAVL 180
                 5678888.8999999999999999655544444442344468999999999**************99644444358899****************9987 PP

      HEAT_2  85 eaL 87 
                  ++
  EPX73665.1 181 LNI 183
                 765 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00061
      HEAT_2  33 lpaLvellededpavRraaaeaLg..aigd.pealpaLkellddddddvvReaAa 84 
                 +++L   ++d d  v++aaa+ L+  +i + + +l  L+e+ld  ++++v + A+
  EPX73665.1 228 VRILKWGMNDRDDSVQQAAANMLAyqWIESaDNNLLELLERLDVVQNSEVANLAI 282
                 7788888999999999999999987788763445666666788777777776665 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 2.2
      HEAT_2  12 pdpevrraairaLgrignpealp 34 
                 ++ + r+ ++  Lg+++ p++lp
  EPX73665.1 746 SEGKERKLIVSLLGKLNIPDTLP 768
                 55567888899999998888876 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0     0.038   1.1e+02       2      27 ..      82     107 ..      81     111 .. 0.87
   2 ?    4.6   0.1     0.016        47       5      29 ..     126     150 ..     122     152 .. 0.83
   3 !   11.4   0.1   0.00011      0.32       4      24 ..     162     183 ..     159     185 .. 0.86
   4 ?    3.1   0.1     0.049   1.5e+02       5      22 ..     230     248 ..     229     251 .. 0.83
   5 ?   -2.0   0.0       2.2   6.5e+03       5      26 ..     517     538 ..     514     540 .. 0.79
   6 ?   -2.0   0.0       2.1   6.3e+03      13      30 ..     668     685 ..     667     686 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.038
                 HHHHHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgal 27 
                 l ++lk l  ++  VR  +++ ++++
  EPX73665.1  82 LKHVLKGLDAKDKTVRFRSCQVVARV 107
                 7899****************998876 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.016
                 HHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAakaLgalae 29 
                 ll    D +++VR  A+ aL +l e
  EPX73665.1 126 LLDRVVDREAFVRLEAVIALSRLQE 150
                 556667999************9976 PP

  == domain 3  score: 11.4 bits;  conditional E-value: 0.00011
                 HHHHHH.T-SSHHHHHHHHHHH CS
        HEAT   4 lllkll.sDpspeVReaAakaL 24 
                 +ll ll +Dpsp+VR+a+++++
  EPX73665.1 162 MLLFLLqNDPSPDVRRAVLLNI 183
                 6788899***********9987 PP

  == domain 4  score: 3.1 bits;  conditional E-value: 0.049
                 HHHH.HT-SSHHHHHHHHH CS
        HEAT   5 llkl.lsDpspeVReaAak 22 
                 +lk+ ++D + +V +aAa+
  EPX73665.1 230 ILKWgMNDRDDSVQQAAAN 248
                 677767***********97 PP

  == domain 5  score: -2.0 bits;  conditional E-value: 2.2
                 HHHHHT-SSHHHHHHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAakaLga 26 
                 ++ + ++ +  +Re  +++L  
  EPX73665.1 517 IIPAVKSHDLPIREKGLECLSL 538
                 677778889999**99999975 PP

  == domain 6  score: -2.0 bits;  conditional E-value: 2.1
                 SHHHHHHHHHHHHHHHHC CS
        HEAT  13 speVReaAakaLgalaev 30 
                  ++V e  + +L +l+ev
  EPX73665.1 668 QWKVVEVFCDTLLNLLEV 685
                 699999999999999987 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.1     0.045   1.3e+02      17      69 ..      76     128 ..      72     129 .. 0.84
   2 ?   13.3   0.5   2.2e-05     0.066      23      79 ..     123     180 ..     116     200 .. 0.87
   3 ?    1.3   0.1      0.11   3.2e+02      26      80 ..     231     283 ..     222     298 .. 0.59
   4 ?    0.2   0.1      0.24   7.1e+02      27      88 ..     347     411 ..     329     453 .. 0.59

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.045
        Cnd1  17 nlveylvepLrkrLkDedpyVRktaaivvakLilndmvkekgflselaklleD 69 
                 ++ +++++++ k+L  +d +VR     vva++i+    ++ ++ s l++ l D
  EPX73665.1  76 DIAQPVLKHVLKGLDAKDKTVRFRSCQVVARVINSVKEIDDDIYSILREKLLD 128
                 688999**************************998777777777777666655 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 2.2e-05
        Cnd1  23 vepLrkrLkDedpyVRktaaivvakLilndmvkekgflselakll.eDenprVvanal 79 
                  e+L  r+ D+++ VR  a+i++++L + +  +e+++ ++l+ ll +D++p V+  +l
  EPX73665.1 123 REKLLDRVVDREAFVRLEAVIALSRLQEDTQEEENDVRNMLLFLLqNDPSPDVRRAVL 180
                 57888999******************999999999999999999999******98765 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.11
        Cnd1  26 LrkrLkDedpyVRktaaivvakLilndmvkekg..flselaklleDenprVvanala 80 
                 L+ +++D+d  V++ aa ++a       +++ +  +l+ l++l   +n++V ++a+ 
  EPX73665.1 231 LKWGMNDRDDSVQQAAANMLAYQ----WIESADnnLLELLERLDVVQNSEVANLAIK 283
                 66778888888888888777643....222222213333333335555555555555 PP

  == domain 4  score: 0.2 bits;  conditional E-value: 0.24
        Cnd1  27 rkrLkDedpyVRktaaivvakL....ilndmvkekgflselaklleD.enprVvanalaalteisek 88 
                 + +L+D++ y  + a +++ +L    +++dm  e g  + l++l +  + +  ++n +++  e+++k
  EPX73665.1 347 YVALRDRSTY--EEASFIIEQLlliaLNQDMADEIGRRKLLKSLTNSlSTSLLSENLISLHVELLKK 411
                 5556666666..5666666666666666666666664444444443213344444444444555555 PP

>> CPSF100_C  Cleavage and polyadenylation factor 2 C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.1      0.06   1.8e+02      40      93 ..     444     495 ..     389     515 .. 0.53
   2 ?    8.9   1.8   0.00053       1.6       8      74 ..     773     844 ..     732     872 .. 0.55

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.06
   CPSF100_C  40 eekeeeeeeeeeeeeeeeaskkqklaeksekeaseeeseekkeslptldvlpan 93 
                 ee+  +++ +e+e++  ++   +++ e++ +++++ee +e  +++++l+ ++a 
  EPX73665.1 444 EEAPPQSS-QEKEKDTASSPSPSNM-EEDGANEETEEYKEAFNEIRCLSYVQAL 495
                 11111111.1111111222222222.2333333444444444445555555544 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00053
   CPSF100_C   8 vksL.kwqkveglevatvtgeleieee..a..eeaeeeekeeeeeeeeeeeeeeeaskkqklaeksekease 74 
                  ks+ k+q++e+++++  + +++i ++  +   ++ee++ e+ee+ee+++e+ee++++ ++ +e++eke+++
  EPX73665.1 773 SKSIrKLQTFENYGLTLDSSSMNILSKfdTmlRNKEEAAREREEQEEKSDEDEEQPEEVNECKETEEKEEEP 844
                 455556666676666666666666655541442222333333333333333333333332221112222111 PP

>> DREPP  DREPP plasma membrane polypeptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   1.4     0.055   1.6e+02     131     176 ..     437     481 ..     410     497 .. 0.66
   2 ?   10.4   8.2   0.00015      0.45     109     192 ..     784     859 ..     765     875 .. 0.67

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.055
       DREPP 131 pateekkkeepaateeaaaeeekskekeivveeaaekkeeeeekke 176
                  +t+e+ +e+p++++++ +++++s      +ee    +ee+ee ke
  EPX73665.1 437 DPTKESLEEAPPQSSQEKEKDTASSPSPSNMEEDG-ANEETEEYKE 481
                 46777778888877777666666655555555522.3333333333 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00015
       DREPP 109 kvGpalvsgpvlfifekvstflpateekkkeepaateeaaaeeekskekeivveeaaekkeeeeekkeeteeaaaaaeaaaaae 192
                 ++G +l s + + i+ k  t+l      +kee+a+  e  ++eeks+e e+  ee +e ke ee+++e ++++  + e+ ++++
  EPX73665.1 784 NYGLTLDSSS-MNILSKFDTMLR-----NKEEAAR--EREEQEEKSDEDEEQPEEVNECKETEEKEEEPAPNNDFNHEKISQDH 859
                 5666555544.678899999995.....4444443..44467788888899999999999888888887777666655554443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (876 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1496  (0.0834402); expected 358.6 (0.02)
Passed bias filter:                      515  (0.0287244); expected 358.6 (0.02)
Passed Vit filter:                        76  (0.00423894); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.86u 0.27s 00:00:01.12 Elapsed: 00:00:00.46
# Mc/sec: 5681.32
//
Query:       EPX73666.1  [L=525]
Description: signal recognition particle subunit Srp54 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.9e-80  267.5   1.5    5.3e-79  264.4   0.6    2.1  2  SRP54            SRP54-type protein, GTPase domain
    8.3e-30  103.3   2.2    8.3e-30  103.3   2.2    3.5  3  SRP_SPB          Signal peptide binding domain
    8.9e-19   67.5   0.8      2e-18   66.4   0.8    1.7  1  SRP54_N          SRP54-type protein, helical bundle domain
    1.3e-06   28.6   0.1    3.5e-06   27.2   0.0    1.7  2  AAA_33           AAA domain
    1.5e-06   27.7   0.1    3.7e-06   26.3   0.1    1.7  1  Zeta_toxin       Zeta toxin
    5.8e-06   26.0   2.7    9.2e-05   22.1   2.3    2.5  1  cobW             CobW/HypB/UreG, nucleotide-binding domain
    1.5e-05   24.1   0.2      0.002   17.2   0.0    2.3  2  MeaB             Methylmalonyl Co-A mutase-associated GTPase 
    0.00015   22.2   0.1    0.00054   20.4   0.1    2.0  1  AAA_17           AAA domain
    0.00032   21.0   0.0     0.0011   19.2   0.0    2.1  1  AAA_22           AAA domain
     0.0017   18.4   0.0      0.004   17.2   0.0    1.7  1  CbiA             CobQ/CobB/MinD/ParA nucleotide binding domai
      0.004   17.2   1.5       0.27   11.2   0.2    2.4  2  ResIII           Type III restriction enzyme, res subunit
     0.0051   16.5   0.1      0.011   15.4   0.1    1.7  1  AAA_30           AAA domain
     0.0079   16.1   0.0      0.017   15.0   0.0    1.5  1  APS_kinase       Adenylylsulphate kinase
     0.0083   16.2   0.0      0.016   15.3   0.0    1.4  1  Torsin           Torsin
     0.0084   16.5   0.0      0.023   15.1   0.0    1.7  1  AAA_16           AAA ATPase domain
     0.0097   15.2   0.0       0.03   13.6   0.0    1.9  2  6PF2K            6-phosphofructo-2-kinase
  ------ inclusion threshold ------
      0.018   14.5   0.3       0.65    9.4   0.1    2.9  3  SRPRB            Signal recognition particle receptor beta su
      0.023   14.4   0.0       0.05   13.3   0.0    1.6  1  AAA_24           AAA domain
      0.027   15.0   0.2       0.22   12.1   0.2    2.5  2  AAA_18           AAA domain
      0.029   14.7   0.0      0.063   13.6   0.0    1.7  1  AAA_19           AAA domain
       0.03   14.2   0.8        0.3   11.0   0.1    2.3  2  AAA_31           AAA domain
      0.048   13.3   0.1       0.11   12.1   0.1    1.6  1  Thymidylate_kin  Thymidylate kinase
       0.05   13.4   1.3      0.087   12.6   0.1    2.0  2  ATP_bind_1       Conserved hypothetical ATP binding protein
      0.087   12.3   0.1       0.18   11.2   0.1    1.4  1  LBP_BPI_CETP_C   LBP / BPI / CETP family, C-terminal domain
      0.094   12.6   0.1       0.23   11.4   0.1    1.7  1  MobB             Molybdopterin guanine dinucleotide synthesis
       0.12   12.7   0.6       0.92    9.9   0.6    2.5  1  AAA              ATPase family associated with various cellul
       0.17   11.7   0.3         20    4.9   0.0    2.5  2  CLP1_P           mRNA cleavage and polyadenylation factor CLP
       0.18   11.4   0.1       0.45   10.1   0.1    1.6  1  AAA_25           AAA domain
       0.18   12.0   0.0       0.33   11.2   0.0    1.5  1  AAA_28           AAA domain
       0.27   11.4   0.8       0.94    9.7   0.1    2.1  2  MazG             MazG nucleotide pyrophosphohydrolase domain


Domain annotation for each model (and alignments):
>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  264.4   0.6   8.8e-82   5.3e-79       1     196 []     101     296 ..     101     296 .. 0.99
   2 ?    1.7   0.0      0.29   1.7e+02      99     129 ..     355     385 ..     352     397 .. 0.87

  Alignments for each domain:
  == domain 1  score: 264.4 bits;  conditional E-value: 8.8e-82
                 SEEEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEEESTSSTTHHHHHHHHHHHTTEEEEESSTTSCHHHHHHHHHHHHHHTTSSEEEEEE--SSTTHH CS
       SRP54   1 pnvillvGlqGaGKTttlaKLaallkkegkkvllvaaDtfRaaAveQLktlaeklgvpvikkkeeadpaavakeavekakeekidvvlvDTaGrlqndk 99 
                 p+vi++vGlqG+GKTtt++KLa +++++g k +lvaaDtfRa+A++QLk++a k++vp++++++e dp+ +a+e+vek+k++++dv++vDT+Gr+q++k
  EPX73666.1 101 PSVIMMVGLQGSGKTTTCTKLALHYQRKGLKSCLVAADTFRAGAFDQLKQNAIKARVPFYGSYTEMDPVVIAQEGVEKFKKDRFDVIIVDTSGRHQQEK 199
                 689************************************************************************************************ PP

                 HHHHHHHHHHHHHSSSEEEEEEETTBHTHHHHHHHHHHHHSSCSEEEEESTTSSSSTTHHHHHHHHHTS-EEEEE-SSSTTGEEE--HHHHHHHHHT CS
       SRP54 100 elmeelkkikkvvkpdevllvldattgqeavkqakaFkeavgitgviltklDgdakgGaalsiaaelklPikfigvGekiedleefdperlvsrllg 196
                 el++e+ +i+++++pd+++++lda++gq+a +qakaFke++++++vi+tklDg+akgG+als++a++++Pi+fig+Ge+i+dle+f+p++++s+llg
  EPX73666.1 200 ELFAEMVEISEAIQPDQTVMILDASIGQAAESQAKAFKESANFGAVIITKLDGHAKGGGALSAVAATNTPIVFIGTGEHINDLEKFSPRSFISKLLG 296
                 ***********************************************************************************************95 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.29
                 HHHHHHHHHHHHHHSSSEEEEEEETTBHTHH CS
       SRP54  99 kelmeelkkikkvvkpdevllvldattgqea 129
                 +++m+ +++   +++ +++l+++d++t+qe 
  EPX73666.1 355 SNMMQGMNDEDGAIRMKRMLYIVDSMTEQEL 385
                 5899************************986 PP

>> SRP_SPB  Signal peptide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1       3.8   2.3e+03      11      29 ..     291     309 ..     281     323 .. 0.72
   2 !  103.3   2.2   1.4e-32   8.3e-30       1      98 [.     325     426 ..     325     427 .. 0.92
   3 ?    3.6   0.6      0.17     1e+02      12      54 ..     425     465 ..     423     468 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 3.8
                 HHHHHCCCCCCHHHHCCC. CS
     SRP_SPB  11 lqqikkmGplskllsmiPg 29 
                 ++++  mG+l+ l++ +  
  EPX73666.1 291 ISKLLGMGDLEGLMEHVQS 309
                 6778889999999998765 PP

  == domain 2  score: 103.3 bits;  conditional E-value: 1.4e-32
                 SSCTHHHHHHHHHHHCCCCCCHHHHCCC........H...CCCCCHHHHHHHHHTTSBHHHHHSGCG-..H..HHHHHHHHHTTS-HHHHHHHHHHHHH CS
     SRP_SPB   1 eftlrdlleqlqqikkmGplskllsmiPgmsae...akaeeeaekklkrieaiidSMTkeErdspekllke..sRkrRiArGsGtsvqevnellkqfeq 94 
                 +ft+rd+++ql +i+k+Gplsk++smiPgms++   ++ +e +  ++kr+ +i+dSMT++E+ds++ l+++  sR+ R+A+GsGtsv ev+e ++q + 
  EPX73666.1 325 KFTVRDFRDQLGNIMKLGPLSKMASMIPGMSNMmqgMN-DEDGAIRMKRMLYIVDSMTEQELDSDGLLFTQqpSRVFRVAKGSGTSVLEVEETISQVRI 422
                 6******************************9987444.4456699********************9998668*************************9 PP

                 HHHH CS
     SRP_SPB  95 mkkm 98 
                 +++m
  EPX73666.1 423 FAQM 426
                 9998 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.17
                 HHHHCCCCCCHHHHCCC.....H...CCCCCHHHHHHHHHTTS CS
     SRP_SPB  12 qqikkmGplskllsmiPgmsaeakaeeeaekklkrieaiidSM 54 
                 q+ k+mG+ + +l+++ g  a a   +++ ++++ ++  ++SM
  EPX73666.1 425 QMAKNMGGKDGILGKLGGNPAAAL--KKDPRQMAAMQKRLQSM 465
                 6789**************666533..33467888888888888 PP

>> SRP54_N  SRP54-type protein, helical bundle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.4   0.8   3.4e-21     2e-18       1      75 []       6      83 ..       6      83 .. 0.97

  Alignments for each domain:
  == domain 1  score: 66.4 bits;  conditional E-value: 3.4e-21
                HHHHHHHHHHHHCCSSCGHHHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHCTTS....S-HHHHHHHHHHHHH CS
     SRP54_N  1 LgkklnsalkklsgkskideedleealkeleeaLleaDVgvkvvkklienvkkkavgekk....lkpkqqvkkivkdeL 75
                Lg++lnsal  +s++++++ee+++++lk +++aLle DV+v++v+ l++n+kk +++  +    ++ k+ v+k+v+deL
  EPX73666.1  6 LGRRLNSALGDFSKATSVNEELVDNLLKSICTALLETDVNVRLVQTLRSNIKK-KINVANlpqgINGKRIVQKTVFDEL 83
                89*************************************************88.899888999***************8 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       9.2   5.5e+03      55      82 ..      28      55 ..      18      78 .. 0.61
   2 !   27.2   0.0   5.9e-09   3.5e-06       1      96 [.     103     213 ..     103     241 .. 0.70

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 9.2
      AAA_33 55 lyqilnelarkalsagrnvildatnlsr 82
                + + l+ +++  l+   nv l +t++s+
  EPX73666.1 28 VDNLLKSICTALLETDVNVRLVQTLRSN 55
                4555555566666666666666666655 PP

  == domain 2  score: 27.2 bits;  conditional E-value: 5.9e-09
      AAA_33   1 lvllvGlpGsGKstlaerl...lkklg..avllssdtlrrrlfgtdqqskt........dytrvldrlyqilnelarkalsagrnvildatnlsrrer. 85 
                 ++++vGl+GsGK+t  ++l   +++ g   +l++ dt+r   f + +q+           yt+  + +++  +e ++k  + +++vi+  t  ++++  
  EPX73666.1 103 VIMMVGLQGSGKTTTCTKLalhYQRKGlkSCLVAADTFRAGAFDQLKQNAIkarvpfygSYTEMDPVVIA--QEGVEKFKKDRFDVIIVDTSGRHQQEk 199
                 89****************95544555599***********999855554334667776666776666654..478899999999999988876664432 PP

      AAA_33  86 ...arflklarrlg 96 
                    a+++++ + + 
  EPX73666.1 200 elfAEMVEISEAIQ 213
                 33355555555555 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.3   0.1   6.3e-09   3.7e-06       9     106 ..      93     195 ..      88     207 .. 0.80

  Alignments for each domain:
  == domain 1  score: 26.3 bits;  conditional E-value: 6.3e-09
  Zeta_toxin   9 k.ypsqerPklillgGqpGAGKselaellkdele.rqgnvvrldpDdlRelhPeyeeilk....adpkkaseltqkdaselvekllqeaiengyniiv. 100
                   +p++ +P +i+++G +G+GK+++ ++l+   + ++ +   + +D++R+    ++++ +    a++  + ++t+ d  +++++ +++  + ++++i+ 
  EPX73666.1  93 AyTPKKGKPSVIMMVGLQGSGKTTTCTKLALHYQrKGLKSCLVAADTFRAGA--FDQLKQnaikARVPFYGSYTEMDPVVIAQEGVEKFKKDRFDVIIv 189
                 4356779************************9997888999********965..444443334379999**************************8751 PP

  Zeta_toxin 101 egtlrs 106
                 ++  r+
  EPX73666.1 190 DTSGRH 195
                 554444 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   2.3   1.5e-07   9.2e-05       2     153 ..     103     253 ..     102     268 .. 0.73

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 1.5e-07
                 EEEEEESTTCCHHHHHHHHH..CT--SS-EEEEESS-SSCHCCCCCCHCCCT.EEEETTTTECCHCTT-HHHHHHHHHHHH.TT-SEEEEEECT.TTTH CS
        cobW   2 vtvltGflGsGKTtLlnhll..enraglklavivNefgevsiDaellretgveivelenGciCctlredllkelealeere.erldviliEttG.laeP 96 
                 v++++G  GsGKTt  ++l    +r+glk  ++  +    +   +l +++  ++     G       + ++ + e +e+ + +r+dvi++ t+G   + 
  EPX73666.1 103 VIMMVGLQGSGKTTTCTKLAlhYQRKGLKSCLVAADTFRAGAFDQLKQNA-IKARVPFYGSYTEM--DPVVIAQEGVEKFKkDRFDVIIVDTSGrHQQE 198
                 78899**********99999998999999999999998766655555554.33333334544433..44444444444433356**********77777 PP

                 HHHHTTSHHHHHCCCECEEEEEEETTTH.CCHCCHHHHHHHHHHTSSEEEEE-HHHH CS
        cobW  97 apvafteeelksdltldavvavvDaknleaeeekieekaedqlaaadllvlnKtDll 153
                 +++  +  e++++++ d +v+++Da  + ++ e++++ +++  ++   ++++K D  
  EPX73666.1 199 KELFAEMVEISEAIQPDQTVMILDA-SIGQAAESQAKAFKESANFG-AVIITKLDGH 253
                 77766699*****************.55577777777777777765.6778999865 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   3.4e-06     0.002      20      66 ..      92     138 ..      84     160 .. 0.93
   2 ?    4.5   0.1     0.025        15     118     146 ..     180     209 ..     161     220 .. 0.81

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 3.4e-06
                 HHHGGG-S-SEEEEEEE-TTSSHHHHHHHHHHHHHCTT--EEEEEE- CS
        MeaB  20 erllakaGraqvvGltGvPGaGkstlvealglelrrrGkrvavlavD 66 
                 ++ ++k G+  v+ + G+ G+Gk t+  +l+l+++r+G +  ++a D
  EPX73666.1  92 QAYTPKKGKPSVIMMVGLQGSGKTTTCTKLALHYQRKGLKSCLVAAD 138
                 5678999**************************************98 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.025
                 HHTT-SEEEEEEESSTTHHHHH.HTT-SEE CS
        MeaB 118 eaaGfDvvlietvGvGqsevdv.aevvdtf 146
                     fDv++++t G  q e ++ ae+v+++
  EPX73666.1 180 KKDRFDVIIVDTSGRHQQEKELfAEMVEIS 209
                 5557***************98647788775 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.1   9.1e-07   0.00054       1     117 [.     107     230 ..     107     241 .. 0.70

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 9.1e-07
                 EE-TTSSHHHHHHHHHHHH...TEE.EEEHHHHHHHHHHTTTSHSSHHHHC.....TSHHHHHHHHHHHHHHHHHHHHHSSEEEEEE-SEEEETTEEEE CS
      AAA_17   1 lGgPGsGKgtqceklveky...gft.hlsaGdllreeakrgglakardemr.....klpleekkelqkeaaekiaeeakkkgvlvdghprikeqagfld 90 
                 +G+ GsGK+t c kl+ +y   g++  l a d +r+ a ++ l+++  + r        + +   + +e  ek +++ + + ++vd+  r ++++++++
  EPX73666.1 107 VGLQGSGKTTTCTKLALHYqrkGLKsCLVAADTFRAGAFDQ-LKQNAIKARvpfygSYTEMDPVVIAQEGVEKFKKD-RFDVIIVDTSGRHQQEKELFA 203
                 79**************9996666663588899999887544.33333333344444445555666777777888775.66889*******988888888 PP

                 SSHHHHHHHH..SE.EEEEE--HHHHHH CS
      AAA_17  91 glpkevleelkpda.iilleadpeeile 117
                 ++  e+ e ++pd  + +l+a+  +  e
  EPX73666.1 204 EMV-EISEAIQPDQtVMILDASIGQAAE 230
                 876.7999****6515558887666555 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   1.9e-06    0.0011       5      98 ..     101     222 ..      97     282 .. 0.86

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 1.9e-06
      AAA_22   5 agilvvtGesGtGKTtllrrlleqldeeakaee...............erpevvfvtlpsstsskdllrellralglelka.............erlss 75 
                  ++++ +G  G+GKTt++ +l+  ++ ++  +                 +   ++  +p  +s +++   +  + g+e+ +             + +++
  EPX73666.1 101 PSVIMMVGLQGSGKTTTCTKLALHYQ-RKGLKSclvaadtfragafdqLKQNAIKARVPFYGSYTEMDPVVIAQEGVEKFKkdrfdviivdtsgRHQQE 198
                 678999******************95.44444479*****9999999988888899999999999999999999999999999999************* PP

      AAA_22  76 eellealeqalrarav.ielliiD 98 
                 +el++ + + ++a +  + ++i+D
  EPX73666.1 199 KELFAEMVEISEAIQPdQTVMILD 222
                 ****99999999999889999988 PP

>> CbiA  CobQ/CobB/MinD/ParA nucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   6.7e-06     0.004       9      89 ..     111     255 ..     104     374 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 6.7e-06
                 TSSHHHHHHHHHHHHHHTT--EEEEEEEESSCCCCHHTTEB-HHHH..................................................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..................................................... RF
        CbiA   9 GvGKTtlaanLaralarrglrVllvDaDpqannlaileglendiep..................................................... 54 
                 G+GKTt++++La   +r+gl+  lv aD+ +  ++  + ++n i+                                                      
  EPX73666.1 111 GSGKTTTCTKLALHYQRKGLKSCLVAADTFRAGAF-DQLKQNAIKArvpfygsytemdpvviaqegvekfkkdrfdviivdtsgrhqqekelfaemvei 208
                 99**************************9977766.444444444478888889999999999999999999999999999999999999999988888 PP

                 .............CCHCCCHHHHHHCHCHHHH..EEEEEEEEESS... CS
                 .............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        CbiA  55 .............dlkrllellealgkkkalllkiagvvlnrvdgene 89 
                              d+ ++++ +e+  k ++   ++  v++++ dg + 
  EPX73666.1 209 seaiqpdqtvmilDA-SIGQAAESQAKAFKESANFGAVIITKLDGHAK 255
                 888888888888844.33444444444444446666666666666544 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.2   0.00046      0.27      26      62 ..     103     138 ..      50     156 .. 0.74
   2 ?    4.6   0.1     0.048        29     123     159 ..     174     214 ..     146     224 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00046
                 EEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEES CS
      ResIII  26 rglikmaTGtGKTlvaaklierllkkgkeekflflvp 62 
                  ++++   G+GKT +++kl+ ++++kg  + +l+ ++
  EPX73666.1 103 VIMMVGLQGSGKTTTCTKLALHYQRKGL-KSCLVAAD 138
                 34456679*****************965.56666665 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.048
                 ....HHHTTT-SEEEEETGGGTTS.T....TTHHHHHT--- CS
      ResIII 123 eeseellrdrfdviiiDEaHrlgakk....swreilekfke 159
                 e  e++++drfdvii+D + r +++k    ++ ei e++++
  EPX73666.1 174 EGVEKFKKDRFDVIIVDTSGRHQQEKelfaEMVEISEAIQP 214
                 5567899**********998888874555588888777765 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.1   1.9e-05     0.011       8      59 ..      92     143 ..      85     222 .. 0.66

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.9e-05
      AAA_30   8 aavealltsgdrvavltGpAGtGKttalkalreaweaag.grviglAptgkaA 59 
                 +a +   +++  v +++G  G+GKtt+ ++l+ +++++g ++ +++A t +a 
  EPX73666.1  92 QAYTPKKGKP-SVIMMVGLQGSGKTTTCTKLALHYQRKGlKSCLVAADTFRAG 143
                 5555554555.48999**********************945555666665553 PP

>> APS_kinase  Adenylylsulphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   2.9e-05     0.017       2      50 ..     101     149 ..     100     156 .. 0.91

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 2.9e-05
                 -EEEEEESSTTSSHHHHHHHHHHHHHHTT--EEEEEHHHHTTTTTTT-- CS
  APS_kinase   2 gvvvwltGlsgsGKstianalekkLvekgisvylLdGdnvRhgLnkdLg 50 
                 + v+++ Gl gsGK+t  ++l+ + ++kg +  l+  d+ R g   +L 
  EPX73666.1 101 PSVIMMVGLQGSGKTTTCTKLALHYQRKGLKSCLVAADTFRAGAFDQLK 149
                 789**************************************99877776 PP

>> Torsin  Torsin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   2.6e-05     0.016      21      88 ..      63     136 ..      45     151 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 2.6e-05
                 HHHHHH--S-HHHHHHHHHHHHHHH......T-SS-SS-EEEEEEE-TTSSHHHHHHHHHHHHSTTGGGSTTEE CS
      Torsin  21 kdlekklfGqhlvkklvvksvkayl......enekpkkpLvlsfhGwtGtGknfvaeiiaenlyrdGlrsdyvk 88 
                 ++l + + G+ +v+k+v   + + +      +++k  kp v+ + G  G+Gk   +  +a +  r+Gl+s  v 
  EPX73666.1  63 ANLPQGINGKRIVQKTVFDELCTLVdpqvqaYTPKKGKPSVIMMVGLQGSGKTTTCTKLALHYQRKGLKSCLVA 136
                 46777788888888888877765542111114678899********************************9885 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   3.8e-05     0.023      19      92 ..      96     155 ..      90     238 .. 0.57

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 3.8e-05
      AAA_16  19 vrsgrpelvllsGesGvGKsslvrellralekd.......ggiflrgkcdqlesaipysalaqalareellrqlldeaesa 92 
                  ++g p++++ +G +G+GK++  ++l+ +++++                            a+++ r + + ql+++a +a
  EPX73666.1  96 PKKGKPSVIMMVGLQGSGKTTTCTKLALHYQRKglksclvA--------------------ADTF-RAGAFDQLKQNAIKA 155
                 678999*********************99999955433330....................3333.334444444433222 PP

>> 6PF2K  6-phosphofructo-2-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.0     5e-05      0.03       6      52 ..      94     145 ..      89     187 .. 0.74
   2 ?   -3.3   0.0       7.6   4.5e+03     129     155 ..     307     333 ..     302     335 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 5e-05
                 HHHT..S-EEEEEESSTTSSHHHHHHHHHHHHH.....HTT--EEEEEHHHH CS
       6PF2K   6 vtnlknsklvivlvGLpargKtyiskkltrylk.....wlgvrtkvFnvgky 52 
                 +t +k ++ vi++vGL   gKt++ +kl    +        v + +F +g +
  EPX73666.1  94 YTPKKGKPSVIMMVGLQGSGKTTTCTKLALHYQrkglkSCLVAADTFRAGAF 145
                 556688999*******************855441222244555555655554 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 7.6
                 EEEE--HHHHHHHHHHHHTTTSGGGTT CS
       6PF2K 129 lesicsdeeiikeNikevklsspDYkd 155
                 ++s+  d++ + +N+++ k++  D+ d
  EPX73666.1 307 VQSLNLDKKNMVKNLEQGKFTVRDFRD 333
                 678888999999999999999999887 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.1    0.0011      0.65       5      34 ..     103     132 ..      99     155 .. 0.83
   2 ?   -0.7   0.0       1.3     8e+02      42      88 ..     178     226 ..     159     249 .. 0.70
   3 ?    1.0   0.0      0.41   2.5e+02      57      89 ..     352     383 ..     346     388 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0011
                 EEEEE-STTSSHHHHHHHHHHSS---B--- CS
       SRPRB   5 avllvGlsdsGKTslftrLttdsvkktvtS 34 
                  +++vGl+ sGKT+  t+L     +k   S
  EPX73666.1 103 VIMMVGLQGSGKTTTCTKLALHYQRKGLKS 132
                 5789***************99988777666 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 1.3
                 TG...GGTT-SEEEETT-GCCSHHHHHHHHHHGG.EE..EEEEEEETTS- CS
       SRPRB  42 kvksekgskltliDfPGheklrqklleklkakss.lk..glvfvvDStid 88 
                 k+ +++ + + ++D  G ++  ++l+ ++++ s+ ++  + v ++D++i 
  EPX73666.1 178 KF-KKDRFDVIIVDTSGRHQQEKELFAEMVEISEaIQpdQTVMILDASIG 226
                 44.45667888899999888888888877665553332256777777765 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.41
                 TT-GCCSHHHHHHHHHHGGEEEEEEEEETTS-H CS
       SRPRB  57 PGheklrqklleklkaksslkglvfvvDStidp 89 
                 PG  ++ q + ++     ++k+++++vDS  ++
  EPX73666.1 352 PGMSNMMQGMNDE-DGAIRMKRMLYIVDSMTEQ 383
                 6666666666666.344569*********8765 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   8.3e-05      0.05       4      75 ..     103     193 ..     100     217 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 8.3e-05
      AAA_24   4 kiliyGpsgiGKTtlakel.........gpkplfidtekGlksldadkfpdie.......swedfldevvel...........aaeladyktlviDtid 75 
                  i+++G +g+GKTt++++l         +   +  dt++ + + d  k + i+       s+++                   + ++++++++++Dt +
  EPX73666.1 103 VIMMVGLQGSGKTTTCTKLalhyqrkglKSCLVAADTFR-AGAFDQLKQNAIKarvpfygSYTE-------MdpvviaqegveKFKKDRFDVIIVDTSG 193
                 6999***************77777776434444446666.333444444444433445555555.......244455559**9999**********976 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.2   0.00037      0.22       1      21 [.     104     124 ..     104     189 .. 0.76
   2 ?   -1.0   0.0         4   2.4e+03      46      92 ..     362     405 ..     344     426 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00037
      AAA_18   1 IlltGtpGvGKttlakeLskr 21 
                 I+  G +G+GKtt +  L+ +
  EPX73666.1 104 IMMVGLQGSGKTTTCTKLALH 124
                 7889**************543 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 4
      AAA_18  46 ldeskrldedkldklldaleenssaleegknlvidghlaeleseaak 92 
                  de   ++++++ +++d + e+     + + l++ ++++  +  a  
  EPX73666.1 362 NDEDGAIRMKRMLYIVDSMTEQEL---DSDGLLFTQQPSRVFRVAKG 405
                 466788888888888888888754...77777888888777776555 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   0.00011     0.063       9      62 ..     100     152 ..      90     247 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 0.00011
      AAA_19   9 kekvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrA..akelrerl 62 
                 k +v+++++  G+GKT++ ++   ++++ g   ++++l++a t rA   ++l+++ 
  EPX73666.1 100 KPSVIMMVGLQGSGKTTTCTKLALHYQRKG---LKSCLVAADTFRAgaFDQLKQNA 152
                 56788899999*********9999999998...57999999888862256666665 PP

>> AAA_31  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1    0.0005       0.3      12      41 ..     111     140 ..     102     157 .. 0.84
   2 ?    0.7   0.1      0.74   4.4e+02     109     126 ..     174     192 ..     163     197 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.0005
      AAA_31  12 GvGKTTtsvnlaaalaklgkkvLlvDlDpQ 41 
                 G GKTTt+++la    ++g k  lv +D+ 
  EPX73666.1 111 GSGKTTTCTKLALHYQRKGLKSCLVAADTF 140
                 89***********************99975 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.74
      AAA_31 109 ellekvkde.YDyiiiDcp 126
                 e +ek+k++ +D+ii+D++
  EPX73666.1 174 EGVEKFKKDrFDVIIVDTS 192
                 5566766544*******86 PP

>> Thymidylate_kin  Thymidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   0.00019      0.11       3      28 ..     108     133 ..     107     140 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00019
                      ESTTSSHHHHHHHHHHHHHHTTE.EE CS
  Thymidylate_kin   3 GlDGaGKttqaellkerlkeegikvv 28 
                      Gl G+GKtt + +l+ +++++g+k +
       EPX73666.1 108 GLQGSGKTTTCTKLALHYQRKGLKSC 133
                      999*******************9844 PP

>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   0.00015     0.087       2      33 ..     107     138 ..     106     143 .. 0.89
   2 ?   -3.2   0.0       9.4   5.6e+03      92     202 ..     185     203 ..     152     230 .. 0.49

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00015
  ATP_bind_1   2 vGpaGsGKttfvgalseilelrgrsvavvNLD 33 
                 vG  GsGKtt + +l+ +++ +g ++ +v  D
  EPX73666.1 107 VGLQGSGKTTTCTKLALHYQRKGLKSCLVAAD 138
                 899*******************9998887655 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 9.4
  ATP_bind_1  92 dyllfDtPG..QielfthseslakiveeLesefalvvvyLvDsqrltdptkfisgllsalsamlrlelPhvvvlnkfDllkeklekeleffedvealsl 188
                 d +++Dt G  Q                                                                                       
  EPX73666.1 185 DVIIVDTSGrhQ--------------------------------------------------------------------------------------- 196
                 333333333221....................................................................................... PP

  ATP_bind_1 189 llekeeekykklae 202
                        + k+l++
  EPX73666.1 197 -------QEKELFA 203
                 .......2222222 PP

>> LBP_BPI_CETP_C  LBP / BPI / CETP family, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1    0.0003      0.18     174     220 ..      18      64 ..       9      70 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.0003
                     ETT----GGGGHHHHHHHHHHHCHHHHHHHHHH-EE----TTEEEEE CS
  LBP_BPI_CETP_C 174 skvgefsveslqalLnymitelleplvneklqkgfplplpkglqlkd 220
                     sk ++++ e+++ lL+++ t lle +vn +l++ +     k+++  +
      EPX73666.1  18 SKATSVNEELVDNLLKSICTALLETDVNVRLVQTLRSNIKKKINVAN 64 
                     88899***************************999877777777655 PP

>> MobB  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   0.00039      0.23       1      33 [.     103     135 ..     103     151 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00039
        MobB   1 vlgivgksgsGKTtLleklipelkarglrvgti 33 
                 v+ +vg +gsGKTt  +kl  + +++gl+ +++
  EPX73666.1 103 VIMMVGLQGSGKTTTCTKLALHYQRKGLKSCLV 135
                 6899************************98776 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.6    0.0015      0.92       1      99 [.     104     215 ..     104     288 .. 0.46

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.0015
                 EEEESSTTSSHHHHHHHHHHHHTHE...EEEEETTTCSSS.......................STTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHH CS
         AAA   1 vllyGppGtGKTllakavakelgve...fleisgsellsk.......................yvgesekkirelfkeakekakpsilfiDEidalaks 73 
                 ++++G  G GKT+++  +a + +++    + + + +++                                              p+++  + ++++ k+
  EPX73666.1 104 IMMVGLQGSGKTTTCTKLALHYQRKglkSCLVAADTFRAGafdqlkqnaikarvpfygsytemD--------------------PVVIAQEGVEKFKKD 182
                 5789***************997533222333444444411112111222222222222222220....................333333333333333 PP

                 H.......TTCCCHHHHHHHHHHHHHHHHTTTS CS
         AAA  74 r.......sgseseeeervvnqLlteldgvkkk 99 
                 r       +++ +++e+++ +++++  +  + +
  EPX73666.1 183 RfdviivdTSGRHQQEKELFAEMVEISEAIQPD 215
                 333333333333333333333333333333332 PP

>> CLP1_P  mRNA cleavage and polyadenylation factor CLP1 P-loop
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.1     0.054        32       2      31 ..     109     138 ..     108     142 .. 0.89
   2 ?    4.9   0.0     0.033        20      97     148 ..     178     231 ..     166     254 .. 0.68

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.054
      CLP1_P   2 pkdsGKSTlarlLlNyalrkgrkpvyvDlD 31 
                  + sGK+T ++ L+    rkg k ++v +D
  EPX73666.1 109 LQGSGKTTTCTKLALHYQRKGLKSCLVAAD 138
                 578***********9999***999999887 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.033
      CLP1_P  97 enkkakasgliIntpGwvkglg..aellleliealepdvvvvldqeellnelkr 148
                 + kk + +++i++t+G  +++   +  ++e+ ea++pd+ v++ +    +  ++
  EPX73666.1 178 KFKKDRFDVIIVDTSGRHQQEKelFAEMVEISEAIQPDQTVMILDASIGQAAES 231
                 445557899*******87754322455677899999998887766444444444 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.1   0.00076      0.45      34      58 ..     102     126 ..      88     136 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00076
      AAA_25  34 elallaGapgtGKttlaldlalava 58 
                 ++++ +G +g+GKtt ++ lal++ 
  EPX73666.1 102 SVIMMVGLQGSGKTTTCTKLALHYQ 126
                 7899******************986 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00055      0.33       2      46 ..     104     155 ..     103     198 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00055
      AAA_28   2 ivitGgestGKTtlleaLa...ar.gyp...vvpEaareileeklakgedal 46 
                 i+++G +++GKTt++ +La   +r g +   v ++++r   +++l+++  ++
  EPX73666.1 104 IMMVGLQGSGKTTTCTKLAlhyQRkGLKsclVAADTFRAGAFDQLKQNAIKA 155
                 788999*************655336544433559999988888887776555 PP

>> MazG  MazG nucleotide pyrophosphohydrolase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.1    0.0016      0.94      26      68 ..      20      61 ..      11      64 .. 0.90
   2 ?   -1.5   0.1       4.8   2.9e+03       9      24 ..     200     215 ..     195     221 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.0016
                HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH CS
        MazG 26 rdeleeELGDvLlqvlflaniaeeeggidledvaetileKler 68
                + +++eEL D Ll  ++ a + e + +++l + ++++++K ++
  EPX73666.1 20 ATSVNEELVDNLLKSICTALL-ETDVNVRLVQTLRSNIKKKIN 61
                56899**************96.999*************99875 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 4.8
                 HHHHHHHHHHHHHHTT CS
        MazG   9 ylleEvgEvaeaIkke 24 
                  l  E+ E+ eaI+ +
  EPX73666.1 200 ELFAEMVEISEAIQPD 215
                 6888999******865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (525 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       809  (0.0451224); expected 358.6 (0.02)
Passed bias filter:                      673  (0.037537); expected 358.6 (0.02)
Passed Vit filter:                       122  (0.00680462); expected 17.9 (0.001)
Passed Fwd filter:                        30  (0.00167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              30  [number of targets reported over threshold]
# CPU time: 0.70u 0.29s 00:00:00.99 Elapsed: 00:00:00.43
# Mc/sec: 3697.98
//
Query:       EPX73667.1  [L=719]
Description: telomere maintenance protein Ccq1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0013   17.6  19.2     0.0024   16.7  19.2    1.4  1  MAP65_ASE1       Microtubule associated protein (MAP65/ASE1 f
     0.0027   16.2  23.6      0.004   15.6  23.6    1.2  1  MAD              Mitotic checkpoint protein
     0.0049   17.3  29.1      0.016   15.6  13.9    2.5  2  DUF4200          Domain of unknown function (DUF4200)
  ------ inclusion threshold ------
      0.079   13.0   4.1       0.42   10.7   4.1    2.3  1  Bap31_Bap29_C    Bap31/Bap29 cytoplasmic coiled-coil domain
      0.085   12.5   2.9        7.1    6.3   0.1    2.7  2  Nup54_57_C       NUP57/Nup54 C-terminal domain
       0.17   11.2  28.3       0.36   10.2   1.6    2.3  2  Tropomyosin      Tropomyosin
       0.68   10.3   9.9       0.23   11.8   1.4    3.1  2  DUF2935          Domain of unknown function (DUF2935)
       0.87   10.3  17.6        1.4    9.6   6.9    2.7  2  YabA             Initiation control protein YabA
        1.6    9.7  25.1    1.4e+02    3.5   0.7    3.5  1  PRKG1_interact   cGMP-dependent protein kinase interacting do
        2.2    8.3  33.1       0.39   10.8  13.2    2.6  2  TPR_MLP1_2       TPR/MLP1/MLP2-like protein
          3    7.7  20.0       0.72    9.7   1.2    3.8  3  DivIC            Septum formation initiator
        3.2    5.6  12.3        5.4    4.9  12.3    1.3  1  Prominin         Prominin
        6.2    7.5  23.3        2.4    8.8  11.0    2.8  2  HIP1_clath_bdg   Clathrin-binding domain of Huntingtin-intera
        6.6    5.7  21.4         20    4.1  21.2    1.8  1  Atg14            Vacuolar sorting 38 and autophagy-related su
        7.9    5.7  26.4       0.71    9.1  11.7    2.3  2  DUF3450          Protein of unknown function (DUF3450)


Domain annotation for each model (and alignments):
>> MAP65_ASE1  Microtubule associated protein (MAP65/ASE1 family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7  19.2     2e-06    0.0024      78     244 ..     528     692 ..     512     718 .. 0.68

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 2e-06
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHTS---SS--TSS--HHH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----...SHHHHHH.. CS
  MAP65_ASE1  78 eelrkekaerlaeflelleqlqklceelgeeplsllidslpklee.leslrkhleelkeekerRleeikelkkqIkslmeeLglepk...tsieedl.. 170
                  e  + k  +     el +q  kl + l++      ++++ +++  le+ r++le+ k++ ++Rl+ei +lk+qI +l++eL++ +k   + +ee++  
  EPX73667.1 528 HEAVNLKNMKQTHADELEQQIAKLTDTLQD-----YREQIREFKIeLEKSRQKLETSKKNDSERLKEIADLKQQITHLSKELDFGFKyiqDIPEEEIrg 621
                 344444455555555555666666666666.....44455555436*************************************9875442444554488 PP

                 .HCT-TTTS-....TSHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHS---HHHHHHHTTTSSSSSHC CS
  MAP65_ASE1 171 .lkesednskklkpltretikkLkllkkeleeqksereek.lkdlrekikeLWnrLqvpqeeqeafvrensslsqe 244
                  l es++++ kl +l++   ++L+++ +++++     +e+ ++  r ++++  +rL++ ++++   ++e +s+s +
  EPX73667.1 622 qLVESNEQKYKLIQLNKTQKEDLDFITQQYQNASTSASEQsKEVARLRVEN--ERLKTINDKA---MEEVKSYSDA 692
                 86677777778999****************987766555505555556665..7777777777...4444444444 PP

>> MAD  Mitotic checkpoint protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6  23.6   3.3e-06     0.004      45     222 ..     500     681 ..     465     705 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 3.3e-06
         MAD  45 eesdrnqelq.krikllekreeekeealreqiElarlkkknlealnkkekekesklaearevisalknelaelkrqiekqelelsekeseleelqerld 142
                  e  +n +lq + ++ l++r    e++l+e + l+ +k+   ++l+++    +++l++ re i++ k el++ ++++e  + + se+ +e+ +l+++  
  EPX73667.1 500 SEFGQNYDLQgAAVQYLQRRLRMVEDELHEAVNLKNMKQTHADELEQQIAKLTDTLQDYREQIREFKIELEKSRQKLETSKKNDSERLKEIADLKQQIT 598
                 567788888834688999999999999999999999888888888888888888888888888888888888888888888888888888888888888 PP

         MAD 143 llkkkls...eleqliqqlekkqkelaeaeqrikeLefeiqsqeddslivknskselaripelekelerlreenkklnelken 222
                  l k+l    ++ q i + e + +  + +eq+ k ++ +  + ed   i+++ ++   + +e  ke++rlr en++l+++++ 
  EPX73667.1 599 HLSKELDfgfKYIQDIPEEEIRGQLVESNEQKYKLIQLNKTQKEDLDFITQQYQNASTSASEQSKEVARLRVENERLKTINDK 681
                 888887632244455566677788888888888888888888889999*****************************998765 PP

>> DUF4200  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6  13.9   1.3e-05     0.016      17      96 ..     525     604 ..     514     613 .. 0.91
   2 !    6.9   7.2    0.0068       8.1      42     107 ..     622     690 ..     615     694 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 1.3e-05
     DUF4200  17 akkeeiqrleealkqreeelekkeqeleedllkfdkflkendakraralkkaeeerklkkekeaeikklkaeietlksei 96 
                     e  +l++  +++ +ele++ ++l ++l+ + + ++e + + ++ ++k e+ +k+  e+ +ei++lk++i++l +e+
  EPX73667.1 525 DELHEAVNLKNMKQTHADELEQQIAKLTDTLQDYREQIREFKIELEKSRQKLETSKKNDSERLKEIADLKQQITHLSKEL 604
                 445677789999999*************************************************************9987 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0068
     DUF4200  42 eleedllkfdkflkendakrara...lkkaeeerklkkekeaeikklkaeietlkseiekleekleeyk 107
                 +l e+ ++  k ++ n+ ++++     +++++ +    e  +e+++l++e e+lk+ ++k  e++++y+
  EPX73667.1 622 QLVESNEQKYKLIQLNKTQKEDLdfiTQQYQNASTSASEQSKEVARLRVENERLKTINDKAMEEVKSYS 690
                 45555566666666666666654222699*************************************997 PP

>> Bap31_Bap29_C  Bap31/Bap29 cytoplasmic coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   4.1   0.00035      0.42       4      32 ..     563     605 ..     560     606 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00035
  Bap31_Bap29_C   4 ekLkkeLkkkk..............kDlealKkQaeglakEYD 32 
                    ++ k eL+k++              k++  lK+Q+ +l+kE D
     EPX73667.1 563 REFKIELEKSRqkletskkndserlKEIADLKQQITHLSKELD 605
                    5555555555555555559**********************88 PP

>> Nup54_57_C  NUP57/Nup54 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.3    0.0098        12       8      24 ..     555     571 ..     549     574 .. 0.92
   2 ?    6.3   0.1    0.0059       7.1      13      23 ..     595     605 ..     590     606 .. 0.87

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0098
  Nup54_57_C   8 LeDYekQLqHLkKElEs 24 
                 L+DY  Q++  k ElE+
  EPX73667.1 555 LQDYREQIREFKIELEK 571
                 9**************96 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0059
  Nup54_57_C  13 kQLqHLkKElE 23 
                  Q+ HL KEl+
  EPX73667.1 595 QQITHLSKELD 605
                 7*********8 PP

>> Tropomyosin  Tropomyosin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   1.6    0.0003      0.36     118     158 ..     516     556 ..     510     558 .. 0.92
   2 ?    7.8  19.2    0.0016       1.9       3     155 ..     555     713 ..     553     716 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.0003
  Tropomyosin 118 varklvvvesdLeraeeraeaaeskiveLeeeLkvvgnnlk 158
                   +r+l +ve++L++a +  +++ +++ eLe+++   + +l+
   EPX73667.1 516 LQRRLRMVEDELHEAVNLKNMKQTHADELEQQIAKLTDTLQ 556
                  58******************************999998887 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0016
  Tropomyosin   3 lkqveeeldeaeerlekakkkleeaekkaekaeaEvaalnrriqlleeelerteerleealekLeeaekaadeserarKvlEnrelkdeekleeleaq 100
                  l+  +e++ e++ +lek  +kle  +k+  +  +E a l+++i+ l +el+   + +++   + e   +  + +e+  K +   + ++e  l++  +q
   EPX73667.1 555 LQDYREQIREFKIELEKSRQKLETSKKNDSERLKEIADLKQQITHLSKELDFGFKYIQDIP-EEEIRGQLVESNEQKYKLIQLNKTQKE-DLDFITQQ 650
                  678899*********************************************9999998843.333344444455777777765555544.46777777 PP

  Tropomyosin 101 lkeakeia....eeadrkyeEvarklvvvesdLer....aeeraeaaeskiveLeeeLkvvgn 155
                  +++a   a    +e +r   E +r  ++ ++ +e+    + +ra+a  +k+++Lee L + +n
   EPX73667.1 651 YQNASTSAseqsKEVARLRVENERLKTINDKAMEEvksySDARADALLAKVSSLEESLAILKN 713
                  766665540000445555567777667777888872222457****************99887 PP

>> DUF2935  Domain of unknown function (DUF2935)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   1.4   0.00019      0.23      44      95 ..     524     575 ..     511     584 .. 0.88
   2 ?    2.0   1.2      0.21   2.5e+02      29      82 ..     637     689 ..     626     703 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00019
     DUF2935  44 ekllaeavelseglvrasseleeavakLneealkltreliqFkkellekvls 95 
                 e+ l+eav+l+++  + + ele+++akL++    + +++++Fk el++  ++
  EPX73667.1 524 EDELHEAVNLKNMKQTHADELEQQIAKLTDTLQDYREQIREFKIELEKSRQK 575
                 667899********9999****************************998766 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.21
     DUF2935  29 ekdlikeakefkkeFekllaeavelseglvrasseleeavakLneealkltrel 82 
                 +k   + ++ +++++++  ++a e s+ +      ++e+++++n++a+++++ +
  EPX73667.1 637 NKTQKEDLDFITQQYQNASTSASEQSKEV-ARLRVENERLKTINDKAMEEVKSY 689
                 56667778888999999999999999998.555777889*********998865 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   6.9    0.0012       1.4       9      79 ..     532     603 ..     522     610 .. 0.84
   2 ?    5.7   2.9     0.019        23      12      60 ..     639     687 ..     625     711 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.0012
                 HHHHHHH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        YabA   9 kleelee.qleelleeleelkeelaelleenaeLeleneklrerleeeekkekekkkelsegkenLarlYee 79 
                 +l+++++ + +el +++++l ++l++  e+ +e+++e ek r++le+++k+++e+ ke+ + k+++++l +e
  EPX73667.1 532 NLKNMKQtHADELEQQIAKLTDTLQDYREQIREFKIELEKSRQKLETSKKNDSERLKEIADLKQQITHLSKE 603
                 456776525678999******************************999999999999999988888887665 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.019
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHXXXXXXXX CS
        YabA  12 eleeqleelleeleelkeelaelleenaeLeleneklrerleeeekkek 60 
                 + +e+l+ ++++ ++  ++ +e  +e a+L++ene+l++  +++ ++ k
  EPX73667.1 639 TQKEDLDFITQQYQNASTSASEQSKEVARLRVENERLKTINDKAMEEVK 687
                 4456777788888889999999999999999999999988744444333 PP

>> PRKG1_interact  cGMP-dependent protein kinase interacting domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.7      0.12   1.4e+02      49      89 ..     503     543 ..     473     548 .. 0.77

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.12
  PRKG1_interact  49 ssllelekrerrslerkiseleeelkeleeLraenqrLkdE 89 
                      +  +l+    + l+r++  +e+el+e  +L++++q   dE
      EPX73667.1 503 GQNYDLQGAAVQYLQRRLRMVEDELHEAVNLKNMKQTHADE 543
                     55566677778889999999999999999999999987777 PP

>> TPR_MLP1_2  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8  13.2   0.00033      0.39      21     112 ..     510     601 ..     498     605 .. 0.79
   2 ?    2.6  11.9      0.11   1.3e+02      16      96 ..     622     706 ..     616     715 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00033
  TPR_MLP1_2  21 eaklqklqedlekqaeiakeaqqkYerelvkhaedv.kelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeelekelselekri 112
                  a++q lq+ l+  ++++ ea +  ++  + ha+++ +++++l + l++++++i+e+k e+e+ +++le+s+++ +e+ +e+ + +++++   
  EPX73667.1 510 GAAVQYLQRRLRMVEDELHEAVN-LKNMKQTHADELeQQIAKLTDTLQDYREQIREFKIELEKSRQKLETSKKNDSERLKEIADLKQQITHLS 601
                 57889999999999999999987.888889999887467999999999999999999999999999999999999888776555444444433 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.11
  TPR_MLP1_2  16 ekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesak....aeleeseeswee 96 
                 +  e++++  kl +  ++q+e +    q+Y++  +  +e++ke+++lr e ++lk+   ++ +e++s +     +l ++ +s+ee
  EPX73667.1 622 QLVESNEQKYKLIQLNKTQKEDLDFITQQYQNASTSASEQSKEVARLRVENERLKTINDKAMEEVKSYSdaraDALLAKVSSLEE 706
                 55678899999999***************************************99877666666655440000444455555555 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   5.9     0.022        27      20      60 ..     542     590 ..     531     591 .. 0.81
   2 ?   -0.2   3.4      0.72   8.6e+02      36      53 ..     586     607 ..     569     636 .. 0.55
   3 ?    9.7   1.2    0.0006      0.72      19      53 ..     658     691 ..     646     701 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.022
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-XX........XXXXXXXX CS
       DivIC  20 kqlkqeiaalqaelaklkaeneeLeaevkdLks........dedyieer 60 
                  +l+q+ia+l+++l+  +++++e + e+++ ++        d ++++e+
  EPX73667.1 542 DELEQQIAKLTDTLQDYREQIREFKIELEKSRQkletskknDSERLKEI 590
                 5899**********************99999876666666666666665 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.72
                 HHHHHHHHHHHHCC-XX....X CS
       DivIC  36 lkaeneeLeaevkdLks....d 53 
                   +e+++L++++  L++    +
  EPX73667.1 586 RLKEIADLKQQITHLSKeldfG 607
                 3356666666666665544442 PP

  == domain 3  score: 9.7 bits;  conditional E-value: 0.0006
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-XXX CS
       DivIC  19 ykqlkqeiaalqaelaklkaeneeLeaevkdLksd 53 
                  +++ +e+a+l  e+++lk  n++  +evk + sd
  EPX73667.1 658 ASEQSKEVARLRVENERLKTINDKAMEEVKSY-SD 691
                 57899**************************9.45 PP

>> Prominin  Prominin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9  12.3    0.0045       5.4     238     406 ..     516     691 ..     499     700 .. 0.74

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.0045
    Prominin 238 LaelerllenlkeakeqLeqvnkle.keLrksgsqLrdglrgvkrdlnqalsnlCqseeCskilssleiekldtskcl.dqlpnvdevl....ealeev 330
                 L++  r++e+  +   +L++++++   eL ++ ++L d l++ ++++++   +l +s++  +++++++ e+l+  ++l +q+ +++++l    + ++++
  EPX73667.1 516 LQRRLRMVEDELHEAVNLKNMKQTHaDELEQQIAKLTDTLQDYREQIREFKIELEKSRQKLETSKKNDSERLKEIADLkQQITHLSKELdfgfKYIQDI 614
                 5555555555555566799999886257*******************999888555566666667777778888888877887777766222268**** PP

    Prominin 331 letnlssivkegla...rlneipekvknqtaevvpdlkkalakgreqikklakkiprealdavisdle.nterssktfdd 406
                 +e+++  +  e+++   +l +++++ k++++ ++++ ++a ++++eq k++a +   ++ ++ +++++ + ++++k+++d
  EPX73667.1 615 PEEEIRGQLVESNEqkyKLIQLNKTQKEDLDFITQQYQNASTSASEQSKEVA-R--LRVENERLKTINdKAMEEVKSYSD 691
                 ****987765554411156677788888888888888888888888888888.3..468888899999999999999887 PP

>> HIP1_clath_bdg  Clathrin-binding domain of Huntingtin-interacting protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8  11.0     0.002       2.4      20      96 ..     528     604 ..     510     606 .. 0.91
   2 ?    3.7   4.3     0.078        93      49      99 .]     625     675 ..     609     707 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.002
  HIP1_clath_bdg  20 qaqeeverekkeleeelerlkeeaerkleeqkeelekLkreleakraelarlkssLesseqsgeqlssqlaaLqaEk 96 
                     ++  ++++ k++ ++ele+  ++ +  l++ +e++ ++k ele++r++l++ k+  +++ ++ ++l++q++ L +E 
      EPX73667.1 528 HEAVNLKNMKQTHADELEQQIAKLTDTLQDYREQIREFKIELEKSRQKLETSKKNDSERLKEIADLKQQITHLSKEL 604
                     566789999**********************************************99999*************9995 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.078
  HIP1_clath_bdg  49 eqkeelekLkreleakraelarlkssLesseqsgeqlssqlaaLqaEkesL 99 
                     e +e+  kL +  ++++++l+ + +  ++  +s ++ s+++a L+ E+e+L
      EPX73667.1 625 ESNEQKYKLIQLNKTQKEDLDFITQQYQNASTSASEQSKEVARLRVENERL 675
                     444444455555568888999999999999999999999999999999887 PP

>> Atg14  Vacuolar sorting 38 and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1  21.2     0.017        20      23     157 ..     522     668 ..     514     712 .. 0.70

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.017
       Atg14  23 rlyelrerlaklksekeslkkkiekalegkeeaeqledkiknkkakleelksliadlrerlqelkdklsqlkkeieekkkklaklsdklk......... 112
                 +++++ ++  +lk  k++   ++e+ +++ +      d ++  +++++e k++ +++r++l++ k+  s++ kei++ k+++ +ls++l          
  EPX73667.1 522 MVEDELHEAVNLKNMKQTHADELEQQIAKLT------DTLQDYREQIREFKIELEKSRQKLETSKKNDSERLKEIADLKQQITHLSKELDfgfkyiqdi 614
                 5666777777888888888888888888777......9999****************************************************999988 PP

       Atg14 113 ..............kRrsdleslqneleerrkkqiaklqdaikrieqklsslssktles 157
                               ++         +l++ +k+ ++ +++++++ +   s+ s++ +  
  EPX73667.1 615 peeeirgqlvesneQK-----YKLIQLNKTQKEDLDFITQQYQNASTSASEQSKEVARL 668
                 8887777444322211.....12234555555555555555554444444433333333 PP

>> DUF3450  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1  11.7    0.0006      0.71      15      92 ..     524     601 ..     511     603 .. 0.93
   2 ?    2.0   6.7     0.088     1e+02      23      86 ..     628     691 ..     619     702 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.0006
     DUF3450  15 aatldqalkeaekavaaaaqsqkkidklddekqellaeyralkeeleslevyneqlerlvasqeqeiasleeqieeie 92 
                 +++l++a + ++  ++ a + +++i kl+d  q++ +++r+ k ele+ + + e  ++  ++  +eia+l++qi+ ++
  EPX73667.1 524 EDELHEAVNLKNMKQTHADELEQQIAKLTDTLQDYREQIREFKIELEKSRQKLETSKKNDSERLKEIADLKQQITHLS 601
                 788999********************************************************************9876 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.088
     DUF3450  23 keaekavaaaaqsqkkidklddekqellaeyralkeeleslevyneqlerlvasqeqeiaslee 86 
                 +++ k ++  +   +  d ++++ q+ +    + ++e+++l+v+ne+l+ + +++ +e++s   
  EPX73667.1 628 EQKYKLIQLNKTQKEDLDFITQQYQNASTSASEQSKEVARLRVENERLKTINDKAMEEVKSYSD 691
                 45556666666677778889999999999999999999999*******9999999999998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (719 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2051  (0.114396); expected 358.6 (0.02)
Passed bias filter:                      580  (0.0323498); expected 358.6 (0.02)
Passed Vit filter:                       116  (0.00646996); expected 17.9 (0.001)
Passed Fwd filter:                        54  (0.00301188); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 1.05u 0.29s 00:00:01.34 Elapsed: 00:00:00.47
# Mc/sec: 4609.83
//
Query:       EPX73668.1  [L=1106]
Description: ubiquitin carboxy terminal hydrolase Ubp22 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.3e-61  205.8   0.4    3.7e-60  203.2   0.0    2.3  3  USP7_ICP0_bdg  ICP0-binding domain of Ubiquitin-specific prot
    8.6e-54  182.4   0.7    1.8e-50  171.5   0.3    2.6  2  USP7_C2        Ubiquitin-specific protease C-terminal
    1.3e-48  165.7   1.4      2e-48  165.1   1.4    1.3  1  UCH            Ubiquitin carboxyl-terminal hydrolase
    8.8e-23   81.4   1.3    2.4e-22   80.0   0.8    2.0  2  UCH_1          Ubiquitin carboxyl-terminal hydrolase


Domain annotation for each model (and alignments):
>> USP7_ICP0_bdg  ICP0-binding domain of Ubiquitin-specific protease 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.23     1e+03      82     107 ..     604     629 ..     601     630 .. 0.89
   2 !  203.2   0.0   8.2e-64   3.7e-60       1     240 []     631     879 ..     631     879 .. 0.94
   3 ?   -1.8   0.0      0.35   1.5e+03      83     131 ..     926     976 ..     923    1021 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.23
  USP7_ICP0_bdg  82 hvyvskeskvsdlvpeineraglpsd 107
                    h+ ++ke +vs+l+p++ er+g+p++
     EPX73668.1 604 HIRIKKELNVSNLLPMVSERVGIPAS 629
                    788999****************9975 PP

  == domain 2  score: 203.2 bits;  conditional E-value: 8.2e-64
  USP7_ICP0_bdg   1 vRlWvmvnrqnkTvRpdqpledeeesktveelreklaskqaelrlylEvlede......lppvkkeddillFlKlfdpekqtLsyvghvyvskesk 90 
                    +RlW++v+rqn T+R+++p+++ +   ++ee++ k++ + + lrlylE+l ++       +   ++ +i+lF+K++d ++q++ ++g+++v k++k
     EPX73668.1 631 LRLWYIVRRQNYTLRVEEPVNELNL--SIEEAKGKWNPQGDILRLYLEILPENqtnyplVNVSFDSPNIFLFIKYYDRKNQEIIGCGTLIVLKSDK 724
                    6***********************9..**********9*9**********93135677744455899***************************** PP

  USP7_ICP0_bdg  91 vsdlvpeineraglpsdtelllyEEikpnmieilklkqtlkkaelqdGdIicfqkelsee...ekdelpdakeyydfllnrveVtFkpk..ekpkd 181
                    +++++pe++er+glp+dt l++yEE+kp++ie l+l++t+++ el  GdIicf++++ e+   +++++++a++ ydf++nrv++tF+p+  ++++ 
     EPX73668.1 725 LESICPELCERVGLPKDTLLHMYEEVKPGYIEYLRLNKTFAEGELGTGDIICFETRNPEDndqANNKFATAAKLYDFMANRVVITFRPRfiDQESI 820
                    ******************************************************88888446799*************************999999 PP

  USP7_ICP0_bdg 182 eeftleLskkmtYdqlaekvaekLkvdptklrfttvnaasgkpkapikrsnqetlkdil 240
                     ef+l+L+++++  +l+e++aekL++ ++++r+tt+++   ++++++ ++ + tl +i+
     EPX73668.1 821 LEFELVLDRRIKLVKLCEELAEKLNTYADHIRLTTCSPLAYAANMVVPNNPNITLYEIM 879
                    ************************************99999999***998777999985 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 0.35
  USP7_ICP0_bdg  83 vyvskeskvsdlvpeineragl..psdtelllyEEikpnmieilklkqtlk 131
                    vy++k  +vsd+++ i ++      ++ ++++yE  +++  + +++++ l+
     EPX73668.1 926 VYINKIGNVSDIFNAISQKYPEleVPNHKVRFYEILEHKWYRDINMRTMLR 976
                    899999999999999999876556788899999988888777777766665 PP

>> USP7_C2  Ubiquitin-specific protease C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.0   0.00036       1.6      25     107 ..     593     685 ..     582     743 .. 0.82
   2 !  171.5   0.3   4.1e-54   1.8e-50       2     204 ..     891    1090 ..     890    1091 .. 0.96

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00036
     USP7_C2  25 lseklkkeeelellvpkngtvkdlleelqkkvklseeeskklrllevsnhkiqkvlkedealeslnds..............ttlraeeipedelel 107
                 +++ + ++  l ++++k+ +v++ll  + ++v+++ +   +lrl+ + + + ++ l+ +e++++ln s                l+ e +pe++ + 
  EPX73668.1 593 FGNPVDEDSMLHIRIKKELNVSNLLPMVSERVGIPAS---RLRLWYIVRRQNYT-LRVEEPVNELNLSieeakgkwnpqgdiLRLYLEILPENQTNY 685
                 556677788899**********************976...*******9988876.566899999987778889999999999999999999999887 PP

  == domain 2  score: 171.5 bits;  conditional E-value: 4.1e-54
     USP7_C2    2 lyYevLsislkElEnkksikvtwlseklkkeeelellvpkngtvkdlleelqkkvklseeeskklrllevsnhkiqkvlkedealeslndsttlrae 98  
                  l+Ye++++sl++l++k+ ++vtwl e+l + e ++++++k g+v+d+++++ +k+   e  ++k+r++e+ +hk+++ ++ ++ l+sln +  ++ e
  EPX73668.1  891 LFYEIMNVSLSDLDKKRLLRVTWLFEGLANAELIDVYINKIGNVSDIFNAISQKYPELEVPNHKVRFYEILEHKWYRDINMRTMLRSLNPFARIIGE 987 
                  9******************************************************999999************************************ PP

     USP7_C2   99 eipedeleleedekliqvfhFskepskthGiPFlfklkegEtfsetkeRlqkrlgvkdkeFekiKfalvtrskykpeyledddlvlldllskeddld 195 
                   ipe+el l+e+e++i v+hF+k++ ++h+iPF+f++k+gE+f+ t+eRl+ r+ ++d+ F+ iKfa+++ +++   yl+ddd   ++ll  ++   
  EPX73668.1  988 IIPEEELCLQENERVIVVCHFHKDVARMHSIPFKFVIKPGEKFAITRERLRFRTMYPDNIFSVIKFAIIDFDRNAVVYLNDDD-DVFELLAGCNG-- 1081
                  ************************************************************************97678999999.67788887777.. PP

     USP7_C2  196 lLgLdHpdk 204 
                  +L++d+++k
  EPX73668.1 1082 TLAMDRAKK 1090
                  9****9876 PP

>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.1   1.4   4.4e-52     2e-48       1     257 []     214     525 ..     214     525 .. 0.88

  Alignments for each domain:
  == domain 1  score: 165.1 bits;  conditional E-value: 4.4e-52
                 -EES-SSSTHHHHHHHHHHHTSHHHHHHHHTCHHCCSSTCCCCC-.TT.TTS.TTHHHHHHHHHHHHHHSH-CCEE--HHHHHHHHHHSGGGTSSSTCE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH   1 tGlsNlGntCymnsvlQcLfsipelrdyllsleevkkesrnkkelnesnplgkkgelakalkdlfkellkskskavsPkklkktlsklaksfsgykqqD 99 
                 +Gl+N G+tCymns+lQ+L+ i ++r+++++  ++k+es+n               +a+al+++f++l+   ++ v ++ l+k++++ + +  +++q+D
  EPX73668.1 214 VGLKNQGATCYMNSLLQSLYIIGTFRKIVYQVPTEKDESKNG--------------IAYALQRCFYNLQ-FMNEPVPTTDLTKSFGWDSLD--SFMQHD 295
                 69*****************************65555555444..............9************.3589*************9877..9***** PP

                 HHHHHHHHHHHHHHHHCCHCCCHHHHHHCCCTTSHHHHHH-EEEEE..................................................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..................................................... RF
         UCH 100 aqEflaflLdqlhedlnrevaeekwkkhlkrndslitdlfegqlks..................................................... 145
                 +qEf ++l d+l+++++             + ++  ++lf g++ks                                                     
  EPX73668.1 296 VQEFNRVLQDNLERSMEG------------TMENALKNLFCGKMKSyvacmnvnyesarteefwdiqlnvkgmknleasfrdyiqvetlegdncyyadt 382
                 ******************............67788889999999999999999999999999999999999999999999999999************* PP

                 ........EEEEEEB-SEEEEEEESEEETEE...EEE--SEEB--SEEE-GGGBSS-BTTS-TCS-BEEEEEEEEEESCTTSEEEEEEEECTTTTEEEE CS
                 ........xxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH 146 ........klklkrlPeiLiihlkRfsynss...ksKlntkvefpeeldlssylaeekkkkteekkkYeLiavvvHsGslssGHYvayiknekngkWyk 233
                          + ++++P+iL+++lkRf+y+ +    +K+n++ efp+e +++ +l+ e++++  ++++Y L++v+vHsG l++GHY+a+ k +k++kWyk
  EPX73668.1 383 ygfqeakkGVIFESFPPILHLQLKRFEYDFErdtMIKINDRYEFPLEFNAKAFLSPEADQD--QNCEYVLHGVLVHSGDLDNGHYYALLKPQKEEKWYK 479
                 *****9999*******************7666799*******************9888877..6689******************************** PP

                 EETTEEEEE-HH.................CCCTT........CEEEEEE CS
                 xxxxxxxxxxxx.................xxxxx........xxxxxxx RF
         UCH 234 ydDetvkevkee.................eevls........sayiLfY 257
                 +dD++v++ + +                 +            say+L+Y
  EPX73668.1 480 FDDTRVTPATLKevleenyggdyfvhppfR---PavklkrfmSAYMLLY 525
                 *********988555555555555555541...0444567999999999 PP

>> UCH_1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.0   0.8   5.3e-26   2.4e-22       1     320 []     214     485 ..     214     485 .. 0.80
   2 ?   -3.9   0.0       1.8   7.8e+03     160     196 ..     940     974 ..     935     976 .. 0.75

  Alignments for each domain:
  == domain 1  score: 80.0 bits;  conditional E-value: 5.3e-26
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1   1 sGLEnhivnsYlNslLQvlyfipplrnlalshlakeckkehcLlcElgflfdmldkakglncqasnFlralssipeasalglileeeeetekssaisls 99 
                 +GL n+ +++Y+NslLQ ly i  +r+++ +  ++++++++ +++ l+  f+ l+  + +++ +++++++++    +++l  + ++  +          
  EPX73668.1 214 VGLKNQGATCYMNSLLQSLYIIGTFRKIVYQVPTEKDESKNGIAYALQRCFYNLQFMN-EPVPTTDLTKSFG----WDSLDSFMQH--D---------- 295
                 8*****************************************************9987.89***********....6778887665..3.......... PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 100 sliqsfnrflldqlekelketkknsseeesaieqllgtkaettirclkCgseksrksstlvldlkyPkpsnekkeakvtfasilksslerekttrawCe 198
                   +q+fnr+l d+le+  + t+      e+a+++l+  k+++ + c++ + e+ r++ +  ++l+     +  k+ + +f ++++    +       C 
  EPX73668.1 296 --VQEFNRVLQDNLERSMEGTM------ENALKNLFCGKMKSYVACMNVNYESARTEEFWDIQLNV----KGMKNLEASFRDYIQVETLE----GDNCY 378
                 ..688************99986......599*********************************55....44566777888888776666....55555 PP

                 xx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 199 kC..kryqpteqrktvknlPpvLalnakleeee.elelwkt...knwlpleiklsldedknleeklkeerekakaekeikvYeLqsvvvhigdskesgh 291
                       +q  +++  ++++Pp+L l++k++e + e++ + +   +  +ple++++            +  +++ ++++   Y+L++v vh gd + +gh
  EPX73668.1 379 YAdtYGFQEAKKGVIFESFPPILHLQLKRFEYDfERDTMIKindRYEFPLEFNAK------------AFLSPEADQDQNCEYVLHGVLVHSGDLD-NGH 464
                 55114556666666777***********996652222222223246666666662............22233345666799***********666.*** PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 292 LvslvkvaekelerdppesqWylFNDflV 320
                 +++l k         ++e++Wy+F+D  V
  EPX73668.1 465 YYALLKP--------QKEEKWYKFDDTRV 485
                 ******2........23579******987 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 1.8
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 160 vldlkyPkpsnekkeakvtfasilksslerekttraw 196
                  ++ kyP  + e +++kv+f +il++++ r+ ++r++
  EPX73668.1 940 AISQKYP--ELEVPNHKVRFYEILEHKWYRDINMRTM 974
                 5566775..3345677899********9999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1106 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       457  (0.0254894); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.74u 0.27s 00:00:01.01 Elapsed: 00:00:00.43
# Mc/sec: 7769.44
//
Query:       EPX73669.1  [L=551]
Description: splicing factor Prp45 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-70  235.5   2.9    2.2e-70  235.5   2.9    1.8  2  SKIP_SNW    SKIP/SNW domain
  ------ inclusion threshold ------
       0.12   12.1  15.0       0.23   11.1  15.0    1.4  1  Cwf_Cwc_15  Cwf15/Cwc15 cell cycle control protein


Domain annotation for each model (and alignments):
>> SKIP_SNW  SKIP/SNW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  235.5   2.9   2.4e-74   2.2e-70       2     160 .]     183     339 ..     182     339 .. 0.98
   2 ?   -5.9   3.5         2   1.8e+04     125     153 ..     381     407 ..     374     413 .. 0.53

  Alignments for each domain:
  == domain 1  score: 235.5 bits;  conditional E-value: 2.4e-74
    SKIP_SNW   2 yikytpsqaeekknseakqriikivekqeDPleppkfkhkkvpagpesppvpvlhspprkltkeeqekwkIPpaiSnwkNpkGytipLdkRlaadgrgl 100
                 yi+ytps  ++  ++ +kqriik+v +++DP+eppkf+hkkvp+gp+sppvpvlhspprk+t++eq++w+IPp+iSnwkNpkGytipLdkRlaadgrgl
  EPX73669.1 183 YIRYTPS--NQMGQAPSKQRIIKLVTEEQDPMEPPKFRHKKVPRGPPSPPVPVLHSPPRKVTAKEQQDWQIPPSISNWKNPKGYTIPLDKRLAADGRGL 279
                 8******..4446899*********************************************************************************** PP

    SKIP_SNW 101 qeveindkFaklseaLeeAerkareevklraelkkklaekekeekeeklrelaekareer 160
                 ++vei+d Fak+seaL +Aer+areev+ ra +++k+aekek+eke++l +la+kareer
  EPX73669.1 280 NDVEISDGFAKFSEALFTAERQAREEVRYRAIMRQKVAEKEKQEKEQRLFMLAQKAREER 339
                 **********************************************************98 PP

  == domain 2  score: -5.9 bits;  conditional E-value: 2
    SKIP_SNW 125 eevklraelkkklaekekeekeeklrela 153
                 e ++ r+e++++   + + eke +l ++ 
  EPX73669.1 381 EGLRRREEIRRER--RRQYEKELRLNRMG 407
                 4556666666544..33445555555544 PP

>> Cwf_Cwc_15  Cwf15/Cwc15 cell cycle control protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1  15.0   2.6e-05      0.23      54     177 ..     291     410 ..     279     418 .. 0.60

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 2.6e-05
                 HHHHHHHHHHHHHHHHH---------------------.----------------..------------------------------------------ CS
  Cwf_Cwc_15  54 lraeLeeaeaeakakkrkkaeleaeeeeekekkeeeee.eeeeeakrrkeelleeareidaddedseeeeeeeeeesdddsdsdsdddddedetaeLlr 151
                 + + L +ae++a+++ r +a ++++ +e++++++e++     ++a+++++  +++++++d+  +d +++++    +s++  +sd d d  ++e++e lr
  EPX73669.1 291 FSEALFTAERQAREEVRYRAIMRQKVAEKEKQEKEQRLfMLAQKAREERTGHVSNRQSVDRSPSDVNDKRS----RSESPVNSDVDVDG-NEEEDEGLR 384
                 56678889999999888877666655543333333332023334444444466666677777776654222....23333334444444.455555567 PP

                 -------------------------- CS
  Cwf_Cwc_15 152 ELekikreraeekerkerekaeeeek 177
                   e i+rer  + e++ r ++  +ek
  EPX73669.1 385 RREEIRRERRRQYEKELRLNRMGAEK 410
                 7899*****99999998887665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (551 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       910  (0.0507558); expected 358.6 (0.02)
Passed bias filter:                      326  (0.0181828); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.29s 00:00:00.85 Elapsed: 00:00:00.46
# Mc/sec: 3636.70
//
Query:       EPX73670.1  [L=379]
Description: septin Spn6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      8e-99  330.4   1.1      8e-99  330.4   1.1    1.8  2  Septin           Septin
    2.7e-05   24.2   0.3    9.4e-05   22.5   0.0    2.0  2  MMR_HSR1         50S ribosome-binding GTPase
    0.00013   22.5   3.4    0.00027   21.5   0.0    3.0  3  AAA_18           AAA domain
    0.00053   19.5   1.7    0.00079   19.0   0.0    2.1  2  Pox_A32          Poxvirus A32 protein
    0.00057   19.8   1.6      0.008   16.1   0.0    2.6  3  RsgA_GTPase      RsgA GTPase
    0.00072   19.8   0.0      0.002   18.4   0.0    1.7  1  AAA_22           AAA domain
    0.00074   18.8   0.0     0.0017   17.7   0.0    1.5  1  KAP_NTPase       KAP family P-loop domain
     0.0013   18.3   4.1       0.16   11.5   0.1    2.7  2  GTP_EFTU         Elongation factor Tu GTP binding domain
     0.0013   18.9   0.2     0.0087   16.2   0.0    2.3  2  AAA_33           AAA domain
     0.0013   19.1   0.0     0.0037   17.6   0.0    1.8  1  RNA_helicase     RNA helicase
     0.0023   17.0   0.5     0.0062   15.6   0.0    1.8  2  T2SSE            Type II/IV secretion system protein
     0.0036   16.8   0.1      0.008   15.7   0.1    1.5  1  AAA_7            P-loop containing dynein motor region
     0.0041   17.1   0.0       0.01   15.9   0.0    1.6  1  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
     0.0044   16.4   0.4      0.026   13.9   0.0    2.0  2  FtsK_SpoIIIE     FtsK/SpoIIIE family
     0.0069   16.1   0.0      0.016   15.0   0.0    1.6  1  IstB_IS21        IstB-like ATP binding protein
     0.0077   16.7   0.3      0.056   14.0   0.0    2.2  2  ABC_tran         ABC transporter
  ------ inclusion threshold ------
      0.013   15.9   0.2      0.081   13.3   0.0    2.2  2  AAA              ATPase family associated with various cellul
      0.015   15.5   0.1      0.033   14.4   0.1    1.6  1  Roc              Ras of Complex, Roc, domain of DAPkinase
      0.037   13.7   0.0      0.081   12.5   0.0    1.6  1  SRP54            SRP54-type protein, GTPase domain
       0.04   13.6   0.0      0.073   12.8   0.0    1.4  1  Sigma54_activat  Sigma-54 interaction domain
      0.048   13.4   0.7       0.18   11.5   0.2    2.2  2  PduV-EutP        Ethanolamine utilisation - propanediol utili
      0.056   13.3   0.5       0.12   12.3   0.0    1.9  2  NTPase_1         NTPase
      0.058   13.1   1.8      0.066   12.9   0.3    1.9  2  AAA_24           AAA domain
      0.062   13.0   0.1       0.12   12.1   0.1    1.5  1  PRK              Phosphoribulokinase / Uridine kinase family
      0.077   13.4   0.0       0.26   11.7   0.0    1.8  2  AAA_16           AAA ATPase domain
      0.082   12.8   2.4       0.12   12.2   0.1    2.2  2  MobB             Molybdopterin guanine dinucleotide synthesis
       0.16   12.0   2.2       0.37   10.8   2.2    1.9  1  CbiA             CobQ/CobB/MinD/ParA nucleotide binding domai
        3.4    8.1  12.9        5.4    7.4   0.9    2.6  2  CCDC-167         Coiled-coil domain-containing protein 167


Domain annotation for each model (and alignments):
>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  330.4   1.1  1.3e-101     8e-99       2     277 ..      28     299 ..      27     303 .. 0.96
   2 ?   -0.1   0.5      0.73   4.6e+02     157     187 ..     310     340 ..     299     356 .. 0.71

  Alignments for each domain:
  == domain 1  score: 330.4 bits;  conditional E-value: 1.3e-101
                 EEEEEEEEEEBTTSSCCCCCCTTSSSS------------.------S-EEEEEEEEETTCEEEEEEEE---BSSSSSHHCCCHHHHHHHHHHHHHHHHH CS
      Septin   2 gieftlmvvGesglGkttlintlfetdlieeekleease.kkkktveikkkkvvieedgvklnltviDtpgfGdavdnskswepiveyideqfeeylre 99 
                 ++ ft+m++G+sg+Gktt+ n lf++ +++ +++++ s+ +k+k+v+i+k+k++i+ed+++lnltv+Dt gfGd+++n+++w++i +y+d+q+e+yl +
  EPX73670.1  28 ECYFTVMLCGSSGTGKTTFCNNLFSSLVKSPKSVDNFSKvHKQKEVHIEKTKAIIKEDDFRLNLTVLDTVGFGDFINNKDCWDVITDYLDDQHEKYLLH 126
                 678***************************99999999989999******************************************************* PP

                 CTSS--SS-----EEEEEEEE-TTSSSS-HHHHHHHHHHTTTS-EEEEESSGGGS-HHHHHHHHHHHHHHHHHTT--------SSSS-SCCHHHHHHHH CS
      Septin 100 esklkRkkivDkRvHaclyfisPtghglkpldvelmkklsekvnliPviaKaDtltkeElkefKkkireeleeeeikiyklpdeeededeeakelsekl 198
                 +++  R + +D+RvH clyfi+P+  g+ pldv +m kls++vn+iPviaKaD+ltk El+++K ki++ l++++i+++ +  +++ +     e +++l
  EPX73670.1 127 DQQSLRLQRKDSRVHLCLYFIKPVPYGMLPLDVVAMNKLSKHVNVIPVIAKADSLTKPELDSLKGKINKILQAQNITLFFPSAIYSAD-----EIAKDL 220
                 *******************************************************************************955555555.....4689** PP

                 HHC-SEEB-SSSSEEEESSSEEEEEEETTEEEETT-TTT-SCCHHHHHHHHHCHHHHHHHHHHTHHHHHHHHHH-XXXX CS
      Septin 199 keslPfaivgsneliekkgkkvrgRkypWGvvevenekhsdFlkLrklllkthledLkevteellYetyRseklsklke 277
                  ++ Pfaiv+s+e ++++ +   gRkypWG+ e+ene+h+dF kL++l++++h+ +L+++te+++Ye+yR+e+l ++k+
  EPX73670.1 221 SQACPFAIVASKEAVNDENEGKIGRKYPWGTSEIENEDHCDFSKLKNLIINNHMLELIQSTEKVIYERYRQEQLINRKN 299
                 *****************999999***************************************************99886 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.73
                 HHHHHHHHHHHHHHHHTT--------SSSS- CS
      Septin 157 eElkefKkkireeleeeeikiyklpdeeede 187
                 e l+e K +i++++ee+++++ + ++e e++
  EPX73670.1 310 ERLNEEKARIQKKVEEKSVELENTFKEREEK 340
                 5677889999999999999888866655544 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   1.5e-07   9.4e-05       2      81 ..      33     126 ..      32     177 .. 0.70
   2 ?   -1.3   0.1       3.4   2.2e+03      64      86 ..     326     349 ..     300     374 .. 0.59

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 1.5e-07
                 EEEEESTTSSHHHHHHHHHT..........STEEESSSTTSSSSEEEEEEEETT..EEEEEEECGGCSS...HHHHHHHHHHHHHHHHCTSEEEE CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltg..........ekaivsdkpgtTrdinegrvklkg..keielvDtpGlie...gaseekglgkaflaleeadlill 81 
                 v++ G + +GK+t+ n l+           + ++v +++ + ++ +++ +k+++   +++++Dt+G+     ++++ +++  ++l+ +  + +l+
  EPX73670.1  33 VMLCGSSGTGKTTFCNNLFSslvkspksvdNFSKVHKQKEVHIEKTKAIIKEDDfrLNLTVLDTVGF-GdfiNNKDCWDVITDYLDDQHEKYLLH 126
                 899***************96555555444346788888888888888888866655779*******5.323345556666666665444444444 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 3.4
                 H..HHHHHHHHHHCTSEEEEEEETT CS
    MMR_HSR1  64 k..glgkaflaleeadlillvvdas 86 
                 k  +l+++f++ ee +l+++  d++
  EPX73670.1 326 KsvELENTFKEREE-KLAVVRDDLN 349
                 22466666766444.4433333333 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   4.3e-07   0.00027       1      44 [.      33      80 ..      33     144 .. 0.77
   2 ?   -0.1   0.2       2.1   1.3e+03      71      89 ..     262     280 ..     161     319 .. 0.62
   3 ?   -0.5   0.4       2.6   1.7e+03      45      69 ..     329     353 ..     299     378 .. 0.54

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 4.3e-07
      AAA_18  1 IlltGtpGvGKttlakeLskrl.gf...gvnlrdvakenglllevdpe 44
                ++l+G +G+GKtt++++L ++l ++   ++n ++v+k+++  +e +++
  EPX73670.1 33 VMLCGSSGTGKTTFCNNLFSSLvKSpksVDNFSKVHKQKEVHIEKTKA 80
                79****************7777677999**********9999998887 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 2.1
      AAA_18  71 leegknlvidghlaelese 89 
                   + knl+i  h+ el++ 
  EPX73670.1 262 FSKLKNLIINNHMLELIQS 280
                 3344555666666655554 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 2.6
      AAA_18  45 aldeskrldedkldklldaleenss 69 
                 +l+++ +++e+kl+++ d l++  +
  EPX73670.1 329 ELENTFKEREEKLAVVRDDLNNELA 353
                 3445555555555555555555443 PP

>> Pox_A32  Poxvirus A32 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.0   1.2e-06   0.00079      11      47 ..      28      64 ..      19      92 .. 0.86
   2 ?   -1.6   0.7       2.4   1.5e+03      76     109 ..     315     350 ..     265     365 .. 0.62

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 1.2e-06
     Pox_A32 11 kkpFrlalvGgsGsGktvyLlsLlrtlvkkykhifLl 47
                + +F + l G sG Gkt++  +L+++lvk  k +  +
  EPX73670.1 28 ECYFTVMLCGSSGTGKTTFCNNLFSSLVKSPKSVDNF 64
                4589************************987776555 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 2.4
     Pox_A32  76 sLsatkekieklakk.eknqk.eaerfLlilDDlGd 109
                 +  ++++k+e+ + + e++ k ++e++ ++ DDl +
  EPX73670.1 315 EKARIQKKVEEKSVElENTFKeREEKLAVVRDDLNN 350
                 334444444433332022223244556667777655 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   1.3e-05     0.008     101     130 ..      32      61 ..      11     102 .. 0.74
   2 ?    2.3   0.0      0.22   1.4e+02      44      95 ..     166     218 ..     157     229 .. 0.69
   3 ?   -3.1   0.1       9.9   6.3e+03      64      90 ..     315     341 ..     297     352 .. 0.49

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.3e-05
                  EEEEECSTTSSHHHHHHHHCTT-----S-- CS
  RsgA_GTPase 101 tsvlvGqSGvGKStLinallpelelktgev 130
                  t++l+G+SG GK+t+ n+l ++l  + ++v
   EPX73670.1  32 TVMLCGSSGTGKTTFCNNLFSSLVKSPKSV 61 
                  789****************99865544443 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.22
                  HTT-EEEEEEE-GGG--HHH...HHHHHHHHHHHTTSEEEE--TTTHTTHHHHHH CS
  RsgA_GTPase  44 ekgiepvivlnKiDlleeee...eleelkeelealgyevllvsaktkegleelke 95 
                  +k+++++ v+ K+D l++ e      ++++ l+a ++++++ sa    +++e+++
   EPX73670.1 166 SKHVNVIPVIAKADSLTKPEldsLKGKINKILQAQNITLFFPSAI--YSADEIAK 218
                  67899999**********996533335556666666666666655..44555555 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 9.9
                  HHHHHHHHHHHTTSEEEE--TTTHTTH CS
  RsgA_GTPase  64 eleelkeelealgyevllvsaktkegl 90 
                  e  ++++++e+  +e+  + ++++e+l
   EPX73670.1 315 EKARIQKKVEEKSVELENTFKEREEKL 341
                  223444444444444444444444444 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   3.1e-06     0.002       9      50 ..      34      80 ..      29     137 .. 0.71

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 3.1e-06
      AAA_22  9 vvtGesGtGKTtllrrlleqldeeakaee.....erpevvfvtlpss 50
                +++G sGtGKTt +++l+++l++ +k  +     ++ + v+++ ++ 
  EPX73670.1 34 MLCGSSGTGKTTFCNNLFSSLVKSPKSVDnfskvHKQKEVHIEKTKA 80
                79*******************86655554676665555555555554 PP

>> KAP_NTPase  KAP family P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   2.6e-06    0.0017      21     184 ..      31     350 ..      23     359 .. 0.90

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 2.6e-06
  KAP_NTPase  21 ivvgLygkWGsGKssllnkledelkefa....................................................................... 48 
                 ++v+L g  G+GK++++n+l ++l +                                                                         
  EPX73670.1  31 FTVMLCGSSGTGKTTFCNNLFSSLVKSPksvdnfskvhkqkevhiektkaiikeddfrlnltvldtvgfgdfinnkdcwdvitdylddqhekyllhdqq 129
                 89***********************9999********************************************************************** PP

  KAP_NTPase  49 ................................kpvrflfaefnawsfkggddavaellaaLadaleeeygqlatkllrakklkalkikgkiklrkacai 115
                                                 +++ ++ +++ +  +k  d++++  l++L   +++  +++++ l+   ++++   ++k     ac +
  EPX73670.1 130 slrlqrkdsrvhlclyfikpvpygmlpldvvaMNKLSKHVNVIPVIAKA-DSLTKPELDSLKGKINKILQAQNITLFFPSAIYSADEIAKDL-SQACPF 226
                 ********************************99999999999999996.**************************9997777766666644.344444 PP

  KAP_NTPase 116 plvlilevalflliegasllavls.........................................................raaklkeeaplkklqtev 157
                 +  ++ ++ +++  +  +++ ++                                                          +a+  + +++    q++v
  EPX73670.1 227 A--IVASKEAVNDENEGKIGRKYPwgtseienedhcdfsklknliinnhmleliqstekviyeryrqeqlinrkngipklkKAHYERLNEEKARIQKKV 323
                 4..4455555667777777777779999**************************************************999888877777778888888 PP

  KAP_NTPase 158 eelladmektLdalqkrlVvviDdLDr 184
                 ee+  ++e+t+++ + +l vv DdL +
  EPX73670.1 324 EEKSVELENTFKEREEKLAVVRDDLNN 350
                 88899*******************986 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   0.1   0.00025      0.16       5      86 ..      32     105 ..      28     108 .. 0.78
   2 !    6.8   1.3    0.0067       4.3     119     154 ..     165     232 ..     158     344 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00025
                 EEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHHHHHSTHCHSHHHHHHTSCSSCEEEEEETTCSSEEEEEEEESSSGGGHHH CS
    GTP_EFTU   5 nigiighvDhGKtTLtdrLlyktgaiskkgekaeeervlDtlkeErergiTiksaaisleketkkylinliDtPGHvdFske 86 
                 +++++g   +GKtT++ +L  ++ +  k  ++++      + k  +++ + i+ + + ++++  + +++++Dt G  dF+++
  EPX73670.1  32 TVMLCGSSGTGKTTFCNNLFSSLVKSPK--SVDN------FSKVHKQKEVHIEKTKAIIKEDDFRLNLTVLDTVGFGDFINN 105
                 78899***************88877655..4443......5677788888888888888844555566789********987 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0067
                 HHTTTEEEEEEESCGST.HHHHHHHHHHHHHHHHHH...............................H CS
    GTP_EFTU 119 lkegvpiivfiNKmDrl.kaelkeiveevkqklsrk...............................e 154
                 l+++v++i +i K+D l k el+ ++ ++++ l+++                               +
  EPX73670.1 165 LSKHVNVIPVIAKADSLtKPELDSLKGKINKILQAQnitlffpsaiysadeiakdlsqacpfaivasK 232
                 567899***********999**********99977778888877766654444444444444444430 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   1.4e-05    0.0087       2      22 ..      33      53 ..      32      96 .. 0.88
   2 ?   -0.0   0.1       1.4     9e+02      21      58 ..     305     351 ..     275     363 .. 0.60

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.4e-05
      AAA_33  2 vllvGlpGsGKstlaerllkk 22
                v+l+G +G+GK+t+  +l   
  EPX73670.1 33 VMLCGSSGTGKTTFCNNLFSS 53
                89*************999754 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 1.4
      AAA_33  21 kklgavllssdtlrrrlfg.........tdqqsktdytrvldrlyqi 58 
                 kk ++++l++ ++r + ++         t ++++++++ v+d+l++ 
  EPX73670.1 305 KKAHYERLNEEKARIQKKVeeksvelenTFKEREEKLAVVRDDLNNE 351
                 45557777777755544442222222222233333445555555555 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   5.8e-06    0.0037       1      27 [.      33      66 ..      33     107 .. 0.75

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 5.8e-06
  RNA_helicase  1 iwlyGpsgeGKStlakeLakallkkl.......k 27
                  ++l+G+sg+GK+t++++L ++l k+        k
    EPX73670.1 33 VMLCGSSGTGKTTFCNNLFSSLVKSPksvdnfsK 66
                  689*******************977622222222 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   9.7e-06    0.0062     113     177 ..      15      81 ..       5      97 .. 0.78
   2 ?   -1.4   0.2       1.5   9.6e+02      36      82 ..     298     343 ..     271     357 .. 0.72

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 9.7e-06
       T2SSE 113 alkekiaevlrkavrerglilvsGgTgsGKttllyallkeinks...derivtvEDpvEiqleganqv 177
                 +l  + + +++k  + + ++++ G  g+GKtt+ + l + + ks    +++  v    E+++e+ +++
  EPX73670.1  15 SLPTDRETFIKKE-ECYFTVMLCGSSGTGKTTFCNNLFSSLVKSpksVDNFSKVHKQKEVHIEKTKAI 81 
                 4556678889998.999*****************9998888776555788999999999999887766 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1.5
       T2SSE  36 lreveelekaalerlisriaalakldiseerplqdarlpekgvrlrv 82 
                  + +++l+ka+ erl ++ +a  +++++e+++ ++ +++e++++l v
  EPX73670.1 298 KNGIPKLKKAHYERLNEE-KARIQKKVEEKSVELENTFKEREEKLAV 343
                 344778888888888776.6677788888888888888877776665 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.1   1.3e-05     0.008      35      61 ..      32      58 ..      22      84 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1.3e-05
       AAA_7 35 pvllvGptGtGKtviikdllkkldkek 61
                 v+l+G++GtGKt+ +++l+++l k+ 
  EPX73670.1 32 TVMLCGSSGTGKTTFCNNLFSSLVKSP 58
                69****************999887433 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   1.6e-05      0.01      21      92 ..      32     107 ..      14     140 .. 0.65

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 1.6e-05
                 EEEEEESTTSSHHHHHHHHHHHTT------T....TTTSEEEEEE..SS......EEEEE-TT-SSTHHHHHCTTCCCCS.TS CS
        TsaE  21 vilLeGdLGaGKTtlvrglakalgveevkSP....TFtlveeYelekeg......lyHfDlYRledeeeleelgleeyle.ee 92 
                 +++L G  G+GKTt++ +l ++l    vkSP     F+ v++ ++   +      ++  D +Rl + + l+++g+ ++++ ++
  EPX73670.1  32 TVMLCGSSGTGKTTFCNNLFSSL----VKSPksvdNFSKVHKQKEV--HiektkaIIKEDDFRL-NLTVLDTVGFGDFINnKD 107
                 599*******************9....5555211145555444332..2335667999999999.577889999999887333 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.0   4.1e-05     0.026      42      72 ..      33      61 ..      15      64 .. 0.86
   2 ?   -0.1   0.4      0.77     5e+02     103     146 ..     324     367 ..     305     378 .. 0.65

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 4.1e-05
                  EEEE--TTSSHHHHHHHHHHHHHTT--TTTE CS
  FtsK_SpoIIIE 42 llvaGatgsGKStalntLilSlatthtPeeV 72
                  ++++G++g+GK+t+ n+L  Sl+   +P+ V
    EPX73670.1 33 VMLCGSSGTGKTTFCNNLFSSLVK--SPKSV 61
                  799*******************97..66665 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.77
                   HHHHHHHHHHHHHHHHHHHHHHHTT-SSHHHHHHHHHHHHHTT- CS
  FtsK_SpoIIIE 103 eralraleeLvkemeeryalfreagvrsiaaydgeiaedpldif 146
                   e+ +  le+  ke+ee  a+ r++  +++a y++++   +++++
    EPX73670.1 324 EEKSVELENTFKEREEKLAVVRDDLNNELAEYHDKVRILETQLD 367
                   44444556666666666677777777777777777766666554 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   2.5e-05     0.016      42     122 ..      22     102 ..      14     122 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 2.5e-05
   IstB_IS21  42 sfiekken...ivllGpsGvGKshlaialgveavraglsvlfvrvedLveelkrarrdgklaralkrllkvdllilDdlgllpl 122
                  fi+k+e+   ++l+G sG+GK+ +   l  + v++ +sv  ++     +e+++++++  +++      + +l +lD +g+ ++
  EPX73670.1  22 TFIKKEECyftVMLCGSSGTGKTTFCNNLFSSLVKSPKSVDNFSKVHKQKEVHIEKTKAIIKE---DDFRLNLTVLDTVGFGDF 102
                 6888888755579***************************87776666677766666554443...446778888888888776 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.0   8.7e-05     0.056      13      80 ..      32     111 ..      27     147 .. 0.67
   2 ?   -0.3   0.5       2.2   1.4e+03      47      95 ..     307     362 ..     263     376 .. 0.57

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 8.7e-05
                 EEEEEESTTSSHHHHHHHHTTSS--SEEEEEET.TCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH..............H CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..............x RF
    ABC_tran  13 kvaivGenGaGKStLlkllagllkpteGeilld.gkdlkeqeleslrkeigvlpqepqlfpeltvren..............e 80 
                 +v + G++G+GK+t+++ l   l +   ++  d   ++++q++ + +k  ++++++  +  +ltv ++               
  EPX73670.1  32 TVMLCGSSGTGKTTFCNNLFSSLVKSPKSV--DnFSKVHKQKEVHIEKTKAIIKED-DFRLNLTVLDTvgfgdfinnkdcwdV 111
                 5899*************9999998888888..413444445666666666666666.55556667777777777654433330 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 2.2
                 CEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH.........HHHTCHHHHHHHSTTG CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxxxxxxx RF
    ABC_tran  47 kdlkeqeleslrkeigvlpqepqlfpeltvren.........esdeeiekalsklglk 95 
                 ++   ++l++ +++i+   +e+++  e t +e+         + ++e++++++k+++ 
  EPX73670.1 307 AHY--ERLNEEKARIQKKVEEKSVELENTFKEReeklavvrdDLNNELAEYHDKVRIL 362
                 333..33444444444444444444444444444455555554444455555555544 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   0.00013     0.081       1      46 [.      33      75 ..      33      95 .. 0.67
   2 ?   -0.4   0.1       2.3   1.5e+03      27      57 ..     310     341 ..     294     371 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 0.00013
                EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHH CS
         AAA  1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekki 46
                v+l+G  GtGKT++++ + ++l  +  +++  + +    +++e +i
  EPX73670.1 33 VMLCGSSGTGKTTFCNNLFSSLVKSPKSVDNFSKV---HKQKEVHI 75
                689****************9985444444443333...33444444 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 2.3
                 EEEETTTCS.SSSTTHHHHHHHHHHHHHHHTS CS
         AAA  27 leisgsell.skyvgesekkirelfkeakeka 57 
                  +++  + + +k v+e++ +++++fke +ek 
  EPX73670.1 310 ERLNEEKARiQKKVEEKSVELENTFKEREEKL 341
                 55555666666777777777777777755443 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.1   5.2e-05     0.033       2      69 ..      33     102 ..      32     124 .. 0.70

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 5.2e-05
                 EEEESSTTSSHHHHHHCHCT-CCC.-EEETTTTEEEEEEECGGSGGCT...TBTTTTCEEEEEEEE-SGGCT CS
         Roc   2 vvlvGdsgvGKtsllkrfvedkfs.ekekstigvdfltkevtkikgve...ndkkvkkvklniWDtaGqerf 69 
                 v+l+G sg+GKt++++++ ++ ++ +k+   ++   ++kev +i++++   ++++  +++l + Dt G  +f
  EPX73670.1  33 VMLCGSSGTGKTTFCNNLFSSLVKsPKSVDNFSKVHKQKEV-HIEKTKaiiKEDDF-RLNLTVLDTVGFGDF 102
                 89***************999887614444445444455555.45544422133333.478888898886655 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   0.00013     0.081       3      31 ..      32      60 ..      30      65 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00013
                EEEEEESTTSSHHHHHHHHHHHHHHTTS- CS
       SRP54  3 villvGlqGaGKTttlaKLaallkkegkk 31
                 ++l+G  G+GKTt +  L   l k+ k+
  EPX73670.1 32 TVMLCGSSGTGKTTFCNNLFSSLVKSPKS 60
                68****************99888887665 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   0.00011     0.073      16      53 ..      24      64 ..       9      74 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 0.00011
                     HHHCTSSS-EEEECSTTSSHHHHHHHHHH...HSTTTTS-E CS
  Sigma54_activat 16 kkvaktdlsvlitGesGtGKellaraihe...askrkekpf 53
                      k  +   +v++ G sGtGK+++ + +++   +s+++  +f
       EPX73670.1 24 IKKEECYFTVMLCGSSGTGKTTFCNNLFSslvKSPKSVDNF 64
                     445556689******************99555555555555 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.2   0.00028      0.18       4      23 ..      33      52 ..      31     132 .. 0.74
   2 ?   -2.8   0.0       7.5   4.8e+03      91     105 ..     170     183 ..     161     201 .. 0.65

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00028
   PduV-EutP  4 illiGkvgsGKttLtqalkg 23
                ++l G++g+GKtt +++l  
  EPX73670.1 33 VMLCGSSGTGKTTFCNNLFS 52
                9***************9976 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 7.5
   PduV-EutP  91 eviGiitkidlaede 105
                 +vi +i k+d   ++
  EPX73670.1 170 NVIPVIAKADSL-TK 183
                 467777777766.33 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   0.00019      0.12       2      33 ..      33      64 ..      32      95 .. 0.90
   2 ?   -2.9   0.1       8.5   5.4e+03     117     140 ..     329     352 ..     314     367 .. 0.64

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00019
                EEEE--TTSSHHHHHHHHHHHH...GGGEEEE CS
    NTPase_1  2 vfiTGppGvGKtTlvkkvlellkssgvkvgGf 33
                v++ G++G+GKtT+++++ + l +s  +v+ f
  EPX73670.1 33 VMLCGSSGTGKTTFCNNLFSSLVKSPKSVDNF 64
                899*******************9988887765 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 8.5
                 HHHHHHTTTSEEEEE--SS--SHH CS
    NTPase_1 117 aveevLksekpvlavihrrkdlal 140
                 ++e+++k+ +  lav++   +++l
  EPX73670.1 329 ELENTFKEREEKLAVVRDDLNNEL 352
                 556666666667777766644433 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.3    0.0001     0.066       5      23 ..      33      55 ..      30     123 .. 0.78
   2 ?   -2.1   0.1       4.1   2.6e+03      87     113 ..     290     318 ..     227     340 .. 0.62

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.0001
      AAA_24  5 iliyGpsgiGKTtlakel....g 23
                +++ G+sg+GKTt++++l     
  EPX73670.1 33 VMLCGSSGTGKTTFCNNLfsslV 55
                899*************9944442 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 4.1
      AAA_24  87 rqnekaeskedkgdg.kG.ygelaeefrr 113
                 rq +  + k++++++ k+ y +l+ee  r
  EPX73670.1 290 RQEQLINRKNGIPKLkKAhYERLNEEKAR 318
                 33333333444333213455555555555 PP

>> PRK  Phosphoribulokinase / Uridine kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   0.00019      0.12       4      52 ..      35      77 ..      32      92 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00019
         PRK  4 vagsSGaGkttvarklekifgrekvkaaeiegdsflrldraekdlelee 52
                ++gsSG Gktt+ ++l +++ +  +       +  ++ +  +k++++e+
  EPX73670.1 35 LCGSSGTGKTTFCNNLFSSLVKSPKS------VDNFSKVHKQKEVHIEK 77
                89*************99999955554......33333444445555554 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00041      0.26      27      51 ..      33      57 ..      25     107 .. 0.82
   2 ?   -1.5   0.0       4.4   2.8e+03     125     125 ..     329     329 ..     261     371 .. 0.55

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00041
      AAA_16 27 vllsGesGvGKsslvrellralekd 51
                v+l G sG+GK++  + l+ +l k+
  EPX73670.1 33 VMLCGSSGTGKTTFCNNLFSSLVKS 57
                8899****************99988 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 4.4
      AAA_16 125 r 125
                 +
  EPX73670.1 329 E 329
                 1 PP

>> MobB  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   0.00019      0.12       2      42 ..      33      73 ..      32      84 .. 0.81
   2 ?   -0.5   0.2       1.6     1e+03     100     119 ..     334     353 ..     303     364 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00019
        MobB  2 lgivgksgsGKTtLleklipelkarglrvgtiKhahhgfdv 42
                + ++g sg+GKTt+ ++l + l ++  +v    + h++ +v
  EPX73670.1 33 VMLCGSSGTGKTTFCNNLFSSLVKSPKSVDNFSKVHKQKEV 73
                689*******************9998888776665555554 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 1.6
        MobB 100 kkealpkievlraelgkeel 119
                  ke+ +k+ v+r++l++e  
  EPX73670.1 334 FKEREEKLAVVRDDLNNELA 353
                 35677899999999887543 PP

>> CbiA  CobQ/CobB/MinD/ParA nucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   2.2   0.00058      0.37       6      30 ..      37      61 ..      33     337 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00058
                SSTTSSHHHHHHHHHHHHHHTT--E CS
                xxxxxxxxxxxxxxxxxxxxxxxxx RF
        CbiA  6 tkGGvGKTtlaanLaralarrglrV 30
                +++G+GKTt++ nL  +l +  + V
  EPX73670.1 37 GSSGTGKTTFCNNLFSSLVKSPKSV 61
                79****************9987776 PP

>> CCDC-167  Coiled-coil domain-containing protein 167
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   7.2      0.16   1.1e+02       6      61 ..     278     333 ..     274     344 .. 0.86
   2 ?    7.4   0.9    0.0085       5.4      37      68 ..     345     376 ..     332     378 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.16
    CCDC-167   6 IdkleeklascrerLeaverrlrkeelseeeResleeEeaslkeqleenekeLksL 61 
                 I+++e+ + + +++ + ++r+    +l + + e+l+eE+a +++++ee+  eL++ 
  EPX73670.1 278 IQSTEKVIYERYRQEQLINRKNGIPKLKKAHYERLNEEKARIQKKVEEKSVELENT 333
                 788888898888999999999999*************************9999864 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0085
    CCDC-167  37 ResleeEeaslkeqleenekeLksLrkeNrks 68 
                 R++l++E+a+   +++  e +L  Lr+  +k+
  EPX73670.1 345 RDDLNNELAEYHDKVRILETQLDALRNYKGKN 376
                 9*************************988887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (379 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1683  (0.0938703); expected 358.6 (0.02)
Passed bias filter:                      573  (0.0319594); expected 358.6 (0.02)
Passed Vit filter:                       103  (0.00574488); expected 17.9 (0.001)
Passed Fwd filter:                        28  (0.00156172); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              28  [number of targets reported over threshold]
# CPU time: 0.62u 0.28s 00:00:00.90 Elapsed: 00:00:00.44
# Mc/sec: 2609.62
//
Query:       EPX73671.1  [L=1353]
Description: hypothetical protein SOCG_02889 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.5e-45  153.4   1.1    1.7e-21   76.8   0.0    3.8  3  Ribonuclease_3   Ribonuclease III domain
    9.7e-26   90.4   2.9    2.9e-13   50.1   0.3    4.0  3  Ribonucleas_3_3  Ribonuclease-III-like
    3.3e-20   72.5   1.7    1.1e-17   64.3   0.3    2.8  2  Helicase_C       Helicase conserved C-terminal domain
    5.4e-20   71.3   0.0    1.5e-19   70.0   0.0    1.8  1  Dicer_dimer      Dicer dimerisation domain
    1.9e-14   54.0   0.1    7.9e-14   52.0   0.1    2.1  1  ResIII           Type III restriction enzyme, res subunit
    3.5e-08   33.4   1.3    5.6e-08   32.8   0.1    2.0  2  DEAD             DEAD/DEAH box helicase
    0.00074   20.2   0.0      0.016   15.9   0.0    2.5  2  dsrm             Double-stranded RNA binding motif


Domain annotation for each model (and alignments):
>> Ribonuclease_3  Ribonuclease III domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1       1.2     3e+03      27      59 ..     868     900 ..     853     909 .. 0.80
   2 !   72.7   0.0   1.2e-23   3.2e-20       1     105 []     913    1021 ..     913    1021 .. 0.87
   3 !   76.8   0.0   6.7e-25   1.7e-21       1     104 [.    1103    1213 ..    1103    1214 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1.2
                     SHHHHHHHHHHHTSHHHHHHHHHCTTCHCCHCH CS
  Ribonuclease_3  27 hegrlsklrsklvsnenlarlakklglpkflra 59 
                      +  l ++ s ++++e++++ + k +l +++++
      EPX73671.1 868 LPSILYYMESLFLTSEFMSEHGLKCSLTHIMQS 900
                     46778999*****************99999984 PP

  == domain 2  score: 72.7 bits;  conditional E-value: 1.2e-23
                      HHHHHHHHHHHHHHHHHHHHHHCTTSSHHHHHHHHHHHTSHHHHHHHHHCTTCHCCHCHH................HHCCSTTCHC....... CS
  Ribonuclease_3    1 erLeflGDavlklaittylfetypdahegrlsklrsklvsnenlarlakklglpkflrasefdpprnwlppgy..klsddekeddd....... 84  
                      +rLeflGD++lk++++  +f +y  ++e +l+  r++++sn nl+ +akk+++ +f   se  + r+w p gy  + +d++    +       
      EPX73671.1  913 DRLEFLGDSFLKIYASLTVFLKYTHDQEYQLHVHRKQIISNYNLYMCAKKIQISRFAL-SEPMVIRKWCPFGYvrEKKDGK----Kyplfqll 1000
                      59*******************************************************9.7888889999999855333333....13344555 PP

                      TSHHHHHHHHHHHHHHHHHCT CS
  Ribonuclease_3   85 adkvladvvEAliGaiyldsg 105 
                      ++k+lad+vE+ iGa++ld+g
      EPX73671.1 1001 SKKRLADLVESTIGACLLDGG 1021
                      ******************987 PP

  == domain 3  score: 76.8 bits;  conditional E-value: 6.7e-25
                      HHHHHHHHHHHHHHHHHHHHHHCTTSSHHHHHHHHHHHTSHHHHHHHHHCTTCHCCHCHH..............HHCCSTTCHC........T CS
  Ribonuclease_3    1 erLeflGDavlklaittylfetypdahegrlsklrsklvsnenlarlakklglpkflrasefdpprnwlppgyklsddekeddd........a 85  
                      ++LeflGDavl+++++ ylf +yp+++ g+l++ +s +v+n++la++a +lgl+k+l +++++  r + + +  + ++ k ++          
      EPX73671.1 1103 QQLEFLGDAVLEYLVVHYLFYRYPELSAGELTNYKSFFVCNHSLAYVAFTLGLHKYLEYDNSEMFRLIYEYKD-MIEEAKMNNVpyfwlqidP 1194
                      68*********************************************************99999998888665.555555544456666666* PP

                      SHHHHHHHHHHHHHHHHHC CS
  Ribonuclease_3   86 dkvladvvEAliGaiylds 104 
                      +k++ad++E+li aiylds
      EPX73671.1 1195 PKFIADIFESLICAIYLDS 1213
                      *****************97 PP

>> Ribonucleas_3_3  Ribonuclease-III-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0         3   7.7e+03      87     103 ..     484     500 ..     467     500 .. 0.58
   2 !   35.8   0.1   2.9e-12   7.4e-09      12     115 ..     899    1024 ..     889    1032 .. 0.73
   3 !   50.1   0.3   1.1e-16   2.9e-13       2     114 ..    1080    1216 ..    1079    1227 .. 0.78

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 3
  Ribonucleas_3_3  87 tegsgrekvladaleAl 103
                      ++ +++e++la+ale+l
       EPX73671.1 484 EKLQNEERILATALESL 500
                      44566777999999986 PP

  == domain 2  score: 35.8 bits;  conditional E-value: 2.9e-12
  Ribonucleas_3_3   12 kSfangrk...ghNerLefLGdavLklsvseyl.lekaekdegeltklraslvseeslaeiAkelg.....Lgkvlrl............rk 82  
                       +S + ++    +++ rLefLGd+ Lk++ s  + l++++ +e +l   r++++s+ +l  +Ak+++     L++ + +            ++
       EPX73671.1  899 QSLTTENAsmdENYDRLEFLGDSFLKIYASLTVfLKYTHDQEYQLHVHRKQIISNYNLYMCAKKIQisrfaLSEPMVIrkwcpfgyvrekKD 990 
                       4554444333389*************99877762666677999***********************77777666666577788877655444 PP

  Ribonucleas_3_3   83 geeete.gsgrekvladaleAliGAiyldkgaev 115 
                       g++ +  +   +k lad++e+ iGA  ld+g + 
       EPX73671.1  991 GKKYPLfQLLSKKRLADLVESTIGACLLDGGVDS 1024
                       4444330233344899**************9876 PP

  == domain 3  score: 50.1 bits;  conditional E-value: 1.1e-16
  Ribonucleas_3_3    2 eelleqaltHkSf..angrkghNerLefLGdavLklsvseyl.lekaekdegeltklraslvseeslaeiAkelgLgkvlrl.......... 80  
                       + ll+ a+ H     +++ +g++++LefLGdavL+ +v++yl ++++e + gelt++++ +v+++sla++A +lgL k+l +          
       EPX73671.1 1080 HALLRLAFIHPTMlsSEELSGSYQQLEFLGDAVLEYLVVHYLfYRYPELSAGELTNYKSFFVCNHSLAYVAFTLGLHKYLEYdnsemfrliy 1171
                       568888899988843445569*******************994566777********************************99999999998 PP

  Ribonucleas_3_3   81 .........rkgeeetegsgrek.........vladaleAliGAiyldkgae 114 
                                +        ++             +ad++e+li Aiyld++++
       EPX73671.1 1172 eykdmieeaK-------MNNVPYfwlqidppkFIADIFESLICAIYLDSNFS 1216
                       8753332221.......22222233333334489**************9875 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.5   0.1     0.004        10       8      74 ..      51     118 ..      44     129 .. 0.76
   2 !   64.3   0.3   4.4e-21   1.1e-17       4     110 ..     341     466 ..     338     467 .. 0.80

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.004
                 HHHHHTTTTSEEEEE.ESSHH.HHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESG CS
  Helicase_C   8 ellkleeeggkilif.vntid.rlekvklllekkgikvavlhgelpqnereeileqfnkgesdvLiatd 74 
                 +ll+ ++++++  +f vnt+   ++++++l+++  +++ +l+ge++ +  eei+ +  k ++ v++ t 
  EPX73671.1  51 QLLEGNKQQKRLSVFlVNTVPlVIQQADYLKSQLPFRIGMLYGEISLKMCEEIFYDV-KMNYEVIVITA 118
                 556556666666665155555655558***9999***********************.55788666654 PP

  == domain 2  score: 64.3 bits;  conditional E-value: 4.4e-21
                 HHHHHHH...HHTTTTSEEEEEESSHHHHHH.HHHH..HHHT.......TSTEEEESTT.........STHHHHHHHHHHHHTTSSSEEEESGGGTSSS CS
  Helicase_C   4 eallell...kleeeggkilifvntidrlek.vkll..lekk.......gikvavlhge.........lpqnereeileqfnkgesdvLiatdvaerGi 80 
                 ++lle+l    + +++++++ifv+++ ++++ +++l  l  k       +i+  ++ g          +  +e+++ +++f++g +++Liat++ae+Gi
  EPX73671.1 341 LTLLEFLenfYKDNDTYRTMIFVERKVTAYSlTRFLrkL--KndtgrlkNIRPFPFIGHgdsdiaslsMHFREQRRNIHNFKRGVYNILIATSIAEEGI 437
                 5566666665689999***********998875666431..2456666645444444434477777779****************************** PP

                 TSTTESEEEESSSSSSHHHHHHHHTTSSST CS
  Helicase_C  81 dipkvnlVinfdlprnvtsyiqriGRtgRa 110
                 dip +nlV++f+ +++vt+++q++GR+ Ra
  EPX73671.1 438 DIPTCNLVVRFNTCQTVTQFVQSKGRA-RA 466
                 **************************8.65 PP

>> Dicer_dimer  Dicer dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.0   0.0   5.7e-23   1.5e-19       1      89 [.     537     621 ..     537     624 .. 0.97

  Alignments for each domain:
  == domain 1  score: 70.0 bits;  conditional E-value: 5.7e-23
  Dicer_dimer   1 aislLnrycatlpsdeytdlrpeyevkevedkergkfqaevtLPsnsplrkiegepmstkklAkrsaAfeackeLhkaglLddhLlPls 89 
                  ai lL++yc+tlp+d+ t   p++++ +     + +f  +v LP+ +++ +i+g+p  + k+AkrsaAf +c eL++ gl+++hL+Pl 
   EPX73671.1 537 AIGLLYQYCNTLPADSITFYYPRFTCISA----GRSFIYTVDLPIICNMPTIQGSPSANSKKAKRSAAFLMCMELINRGLINKHLQPLD 621
                  799*************999*******999....******************************************************96 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.0   0.1   3.1e-17   7.9e-14      21     170 ..      19     184 ..       4     185 .. 0.77

  Alignments for each domain:
  == domain 1  score: 52.0 bits;  conditional E-value: 3.1e-17
                 ...TTSEEEEEESTTSTHHHHHHHHHHHH-S............-EEEEESSHHHHHHHHHHGGGGTGG......GEEE.ESSS-B--.......-SEEE CS
      ResIII  21 s.krdkrglikmaTGtGKTlvaaklierllkkgkee.......kflflvprkslleqtleefkkflseayke..igkk.vsgdkkkakekdstnkkilv 108
                 +  ++++ l++maTG+GKTl+a+kli++ ++k+  e         +flv++  l+ q  + +k+ l+         ++ ++  +++ +   + n +++v
  EPX73671.1  19 DvAKQQNTLLVMATGAGKTLLAVKLIKEKQEKQLLEgnkqqkrLSVFLVNTVPLVIQQADYLKSQLPFRIGMlyG-EIsLKMCEEI-FYDVKMNYEVIV 115
                 2468999*********************999988778889988889*****************999998554532.2223333333.477799****** PP

                 EEHHHHHHTH........HHHTTT-SEEEEETGGGTTS.TTTHHHHHT---............SEEEEEESS-S CS
      ResIII 109 ttiqsldadseeeeeeseellrdrfdviiiDEaHrlgakkswreilekfke............avllglTATpe 170
                 +t + ++  +     ++  l+   fd++++DE+H++ +++++ +il  f +              ++g+TA p+
  EPX73671.1 116 ITADLFYLCL-----ARGFLSILDFDILVFDECHHAIKNHAYARILIDFYHvakattilekslPSIFGMTASPY 184
                 **********.....9999999****************988888733332222234444445588999999886 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.8   0.1   2.2e-11   5.6e-08       3     142 ..      13     156 ..      11     185 .. 0.78
   2 ?   -3.3   0.1       2.5   6.5e+03     135     169 ..     814     847 ..     810     851 .. 0.68

  Alignments for each domain:
  == domain 1  score: 32.8 bits;  conditional E-value: 2.2e-11
                 HHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHS....TTSTS-EEEEEESSHHHHHHHHHHHHHHTTT.STSEEEEEETTSSHHHHHHHHHT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   3 iQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyet....kgktgpkalivePtreLaeqtlnnlkkfkky.idlrvlliiggvaardqlskldn 96 
                 +Q+ +++ +  +++ l+ ++TG+GKTl ++  + ++  ++    +++++   ++++ t  L+ q+++ lk+ + + i+  +   i+ +  ++   +++ 
  EPX73671.1  13 YQRDIFDVAK-QQNTLLVMATGAGKTLLAVKLIKEKQEKQllegNKQQKRLSVFLVNTVPLVIQQADYLKSQLPFrIG-MLYGEISLKMCEEIFYDVKM 109
                 6777777766.7799*************9988887765558988888888999*****************99996454.22234556667788888899 PP

                 TCSEEEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHT.TTHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxx RF
        DEAD  97 gvdivvgtpgrlddllstgklnlsqvrflVlDEadrlldq.gfsdfi 142
                 +++++v t + +   l +g l++ ++ +lV+DE++   ++  + + +
  EPX73671.1 110 NYEVIVITADLFYLCLARGFLSILDFDILVFDECHHAIKNhAYARIL 156
                 9********9999999*******************999884444444 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 2.5
                 HTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSB CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 135 dqgfsdfinrilnqlpqitcdgklqrqvivlSATl 169
                 +q+fs  ++r+ +ql+   ++ k++ +    SATl
  EPX73671.1 814 QQEFSTVCKRMPSQLNYSLNK-KQSMHSKKPSATL 847
                 678999999999999544443.3344466777777 PP

>> dsrm  Double-stranded RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   6.1e-06     0.016       2      66 ..     538     606 ..     537     607 .. 0.75
   2 ?    1.3   0.0      0.22   5.6e+02       7      50 ..     819     859 ..     815     866 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 6.1e-06
                 HHHHHHHHHHTT.....SEEEEEEEEEESSTSSSEEEEEEEEE...TTEEEEEEEES.SHHHHHHHHHHHHHHH CS
        dsrm   2 KskLqeycqkkg.....kppnyeyvseegpphslpkFvvtvkv...ngklygsGvgs.nKKeAeqsAAedalek 66 
                 + +L++yc         +     y  + +  ++ ++F+ tv +    ++  ++G+ s n K+A+ sAA  ++ +
  EPX73671.1 538 IGLLYQYCNTLPadsitF-----YYPRFTCISAGRSFIYTVDLpiiCNMPTIQGSPSaNSKKAKRSAAFLMCME 606
                 679*********755552.....33344444444589999999999777777999999***********99965 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.22
                 HHHHHTTSEEEEEEEEEESSTSSSEEEEEEEEETTEEEEEEEES CS
        dsrm   7 eycqkkgkppnyeyvseegpphslpkFvvtvkvngklygsGvgs 50 
                   c+++  ++ny+ +++++ +++  k ++t+++ +++y +G ++
  EPX73671.1 819 TVCKRMPSQLNYSLNKKQSMHSK--KPSATLRL-NRIYLTGLSK 859
                 579**********9999999776..66888887.6666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1353 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       806  (0.0449551); expected 358.6 (0.02)
Passed bias filter:                      509  (0.0283898); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.91u 0.29s 00:00:01.20 Elapsed: 00:00:00.48
# Mc/sec: 8426.83
//
Query:       EPX73672.1  [L=380]
Description: Svf1 family protein Svf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.1e-54  182.5   0.3    6.2e-53  179.0   0.1    2.1  2  Svf1_C    Svf1-like C-terminal lipocalin-like domain
    1.9e-48  164.6   0.0    3.1e-48  163.9   0.0    1.3  1  Svf1      Svf1-like N-terminal lipocalin domain


Domain annotation for each model (and alignments):
>> Svf1_C  Svf1-like C-terminal lipocalin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0     0.022     2e+02      61      86 ..      39      63 ..      19     184 .. 0.82
   2 !  179.0   0.1   6.9e-57   6.2e-53       2     165 .]     218     380 .]     217     380 .] 0.99

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.022
      Svf1_C 61 leaklDeetgwkvPksiklelkgkks 86
                 + ++D+ ++w+ P++ ++e + + +
  EPX73672.1 39 HTLTEDD-SRWSTPSNSHVETQIFYI 63
                3334444.799999999998876655 PP

  == domain 2  score: 179.0 bits;  conditional E-value: 6.9e-57
      Svf1_C   2 kpnhaAksWnflnFqsekvsavlmeFttpksygntkvsigiivkddkilavtvdnkvehleaklDeetgwkvPksiklelkgkksevkdeeveaklead 100
                 kp+h+A+sW+f+  q+++++ v+m+F+tp+syg+t v++g +v++dk++avtvdn++eh ++k+D+et+w++P++i +++ gk++e+ ++ v+ +++a 
  EPX73672.1 218 KPQHLASSWEFALLQNPRYTGVMMQFKTPPSYGSTIVNVGGLVTKDKVVAVTVDNTIEHVDVKTDPETEWPEPTRIAYDWVGKDAETYQKPVHLSVDAT 316
                 8************************************************************************************999*********** PP

      Svf1_C 101 leelvervDvlaeiPqfvkkivsgvagtkPYiYqylnkkelklkvedeeevkekGllfaEatfis 165
                 l+++++r+ vl+eiP++++ +v++v+gtkP+iYqy+ ++++kl++++ee ++e+++lf+E+tfis
  EPX73672.1 317 LGRRLQRINVLSEIPTWLRGFVHNVSGTKPFIYQYFTPVTFKLNIDGEE-IEEEATLFNETTFIS 380
                 ***********************************************97.9*************8 PP

>> Svf1  Svf1-like N-terminal lipocalin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.9   0.0   3.4e-52   3.1e-48       1     164 []      56     215 ..      56     215 .. 0.97

  Alignments for each domain:
  == domain 1  score: 163.9 bits;  conditional E-value: 3.4e-52
        Svf1   1 vEtqtfYftdldggivgfvQiiySnviGlyktaqftfkifdskekkeknlWkstklenfei..dkasfyadnlsielkneegeqykikssvnkelkvdl 97 
                 vEtq+fY+   +++ + fvQ+i+Sn+ ++++taq t++ifd ++ +e++lW+st+l++f++  +++ f a+n+si+l  e +++y+i+ssvn ++++d+
  EPX73672.1  56 VETQIFYIRPRNSNLMCFVQLIHSNLGSWTTTAQSTCRIFDLDN-PENDLWTSTNLDQFSFenNRTCFRAANISIDL--EGDSTYRIRSSVNMDSIIDI 151
                 8*************************88**************99.888*************878899**********..57899*************** PP

        Svf1  98 tvtrlapGfklgedgttyfgddieepwgsmrHvfwPrnkveGtivlkkedkkieftgelglfvdAlq 164
                  v++ +p fk+ge+gt+ +g+d+++pw sm+HvfwPr +veG+iv++  +++++++g+ glf++Alq
  EPX73672.1 152 VVHQESPPFKIGETGTSNYGTDPTKPWASMKHVFWPRIRVEGNIVAR--GNVVDVSGT-GLFIHALQ 215
                 **********************************************9..99******6.*******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (380 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       397  (0.0221429); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.45
# Mc/sec: 2542.70
//
Query:       EPX73673.1  [L=534]
Description: hypothetical protein SOCG_02891 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.6e-69  233.3  42.2    4.6e-69  233.3  42.2    1.4  1  AA_permease_2  Amino acid permease
    1.1e-18   67.1  38.1    1.6e-18   66.6  38.1    1.1  1  AA_permease    Amino acid permease
  ------ inclusion threshold ------
      0.017   14.7   2.0       0.54   10.0   0.3    3.4  2  DUF1648        Protein of unknown function (DUF1648)


Domain annotation for each model (and alignments):
>> AA_permease_2  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  233.3  42.2   7.6e-73   4.6e-69       1     424 [.      32     480 ..      32     481 .. 0.88

  Alignments for each domain:
  == domain 1  score: 233.3 bits;  conditional E-value: 7.6e-73
  AA_permease_2   1 lsllsafalvigsvigsgifvkn...laasggpalilwvwiavligslavllvyaElssalprsgGiyvytkaa....fgkkvaflsawfnwfayv 89 
                    +s +s f+++++++  +++f+++    ++++g+ +++w+w+++++++ +v++ +aEl+s +p+sgG+y  ++++    +g+++a+l++w+n f +v
     EPX73673.1  32 FSSFSSFCVSFSVLGLLPSFASTmyyTTGYVGTPAMVWGWLIAMVFVQCVAYGMAELCSSMPTSGGLYYAAAKLapgrWGPLAAWLTGWSNYFVQV 127
                    6789**********9999998888888999***************************666**************6666699999************ PP

  AA_permease_2  90 pvlasilsvaasyllnal...gpdlqgntwltyliaiaililvalinirgikesakiqnilgilkillpliiliilglitvdgggfsslstetdtf 182
                     +++s+++++ +++l++l   +p++ +++++++l+a+a +i  +li+++ +k +a +++++++++++++ i++i l  ++++++ f+s    t+ +
     EPX73673.1 128 TAAPSVAYSFSGMILSLLqikNPNYSPQNYQIFLLACAGMIAMTLISCLPTKVVAHFNTCGTVVNVVFLGIVMITLLAVAGKNHAFNS----THDV 219
                    **************999844456*******************************************8777777777777777778875....5555 PP

  AA_permease_2 183 fpngwpgv........llgllivlwsfdGfesaanvseevkk.k.dvpkaifigllivlvlyllvniaflgvvpddeianlsnlgsvaalffeavg 268
                    ++n+ +++        l+++++v+w+++G++s  + see  +    +pkai++  ++ +++++l+n+ +++ + d +   +++lg+++ +++++v 
     EPX73673.1 220 WANFDNQTdwsdgfglLMSFAGVIWTMSGYDSPFHLSEECSNaSvAAPKAIIMTSAFGGIVGWLLNLIIAYTIVDVKKVMNDSLGQPYVVYLQQVC 315
                    5554443223334456999999*****************8885447*************************9999887777999************ PP

  AA_permease_2 269 gkvvaiivvilialsllgaintavigssrvlealardgvlP..rffakvn.kfgspiraiiltaivslillllfllassaaynfllsvsslgliis 361
                        ++++++l++++++ ++ ++++++srv ++ ardgv+P  r++a+++ ++++p r+++ + i  ++llll+ +  + a+n+++sv+++++++ 
     EPX73673.1 316 DYKTTVALAALTIVCSFMMGQGCMVAASRVTYSYARDGVFPfsRYLAHIDvRTKTPNRCTWMNTITGMLLLLLIFA-GDVAINAIFSVGAIAAFVA 410
                    88*****************************************************************999877765.58***************** PP

  AA_permease_2 362 yllliigalilrkkrphl......krpgkilvaiigalfllfllvalffppkgpa..tqssliytiiltva 424
                    ++++i+  +    +   +      +r+   +++ ++++f+l++l +l+fp+ + +  + +++++t++++++
     EPX73673.1 411 FTIPIFIKITCVSDLDFQrgpfhlGRFS-KPIGYMSCIFVLLMLPILCFPQTKGKnlNAQGMNWTCVVYGF 480
                    *****99999999877553222225553.78*******************77666688999****999875 PP

>> AA_permease  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.6  38.1   2.6e-22   1.6e-18      18     460 ..      54     490 ..      41     498 .. 0.81

  Alignments for each domain:
  == domain 1  score: 66.6 bits;  conditional E-value: 2.6e-22
  AA_permease  18 glgvvlsqaGplgallayllagvviflvmlslgeiatngpksggfyt....yasrflgpelGfviGlnylfswitvlalelta.asil...iqfw..e 105
                   ++++++ +G  +++ ++l+a+v++ +v++ ++e+ + +p sgg y+    +a   +gp +++ +G++  f+++t+++      ++++   +q+   +
   EPX73673.1  54 TMYYTTGYVGTPAMVWGWLIAMVFVQCVAYGMAELCSSMPTSGGLYYaaakLAPGRWGPLAAWLTGWSNYFVQVTAAPSVAYSfSGMIlslLQIKnpN 151
                  57889999999999**************************9999887333366667899999999999777777777765543133330113333225 PP

  AA_permease 106 lvtdlpkawvtgavflvvlliinlvgvkvygeaefilalikiiaiiafiivgiillaggkpnkgagfrflgdngsifknnlppgfakeeegafknfis 203
                  + +++ +++  ++  ++++++i+ +  kv + + ++ +++ ++ + +++i +   la +++n++  f +++d ++    n+ ++++ +++    + ++
   EPX73673.1 152 YSPQNYQIFLLACAGMIAMTLISCLPTKVVAHFNTCGTVVNVVFLGIVMITL---LAVAGKNHA--FNSTHDVWA----NFDNQTDWSDG---FGLLM 237
                  68888888888*************************9999999998888887...334444455..566666666....44444332222...38999 PP

  AA_permease 204 vfvivvfaftGielvaiiagEvkdPeksiPkailqvviritifYvlsllligllvprndlgllndsasaaspfvifikesgvsvlaplinaviltaal 301
                   f+ v+ +++G+ +   +++E+++ + + Pkai+++    +i+  l+ l+i  ++++   +++nds+    p+v++++        + ++a++++  +
   EPX73673.1 238 SFAGVIWTMSGYDSPFHLSEECSNASVAAPKAIIMTSAFGGIVGWLLNLIIAYTIVDVK-KVMNDSLGQ--PYVVYLQQVCDYKTTVALAALTIVCSF 332
                  9********************************************99999999998766.999999988..999999999999999999999999999 PP

  AA_permease 302 ssansslysasRvlyslakdglaP..kvlkkvs.krgvPlraillsmiisllalllaslnlaapivfnfllaisaliglivwlliilsylrfRkalky 396
                  +++ +++++asRv ys+a+dg++P  ++l+ ++ + + P r   + +i+++l+l l  ++ +  +++n + ++ a+++++ +++ i+  +     l  
   EPX73673.1 333 MMGQGCMVAASRVTYSYARDGVFPfsRYLAHIDvRTKTPNRCTWMNTITGMLLL-LLIFAGD--VAINAIFSVGAIAAFVAFTIPIFIKITCVSDLDF 427
                  **************************77766664999***********999988.5566666..9***********************999******* PP

  AA_permease 397 qgrsieelgfkaallplgvilvlaaliiillilalyayltvkkgpkdwgaasfaaaylivllfl 460
                  q+    + +f  + + + +i+vl++l i++  ++  + l ++++  +   ++ + + +i++++ 
   EPX73673.1 428 QRGPFHLGRFSKPIGYMSCIFVLLMLPILCFPQTKGKNLNAQGMNWTCV-VYGFPMLIIIMWWF 490
                  ***************************9999999998888555554433.34444444444433 PP

>> DUF1648  Protein of unknown function (DUF1648)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.3   9.1e-05      0.54       2      31 ..     161     190 ..     159     206 .. 0.78
   2 ?    2.4   0.1      0.02   1.2e+02      30      48 ..     439     457 ..     431     458 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 9.1e-05
     DUF1648   2 llllplvvglllypkLPdqiPtHfnasGep 31 
                 ll+++ +++  l + LP ++  Hfn  G++
  EPX73673.1 161 LLACAGMIAMTLISCLPTKVVAHFNTCGTV 190
                 445555556669999**********99987 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.02
     DUF1648  30 epDgygsKlfalfllPllm 48 
                 +p gy+s  f+l++lP+l+
  EPX73673.1 439 KPIGYMSCIFVLLMLPILC 457
                 5789*************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (534 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       918  (0.051202); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.67u 0.30s 00:00:00.97 Elapsed: 00:00:00.45
# Mc/sec: 3534.83
//
Query:       EPX73674.1  [L=431]
Description: hypothetical protein SOCG_02892 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.3e-30  105.3   0.0    3.4e-30  104.0   0.0    1.7  1  Atx10homo_assoc  Spinocerebellar ataxia type 10 protein domai


Domain annotation for each model (and alignments):
>> Atx10homo_assoc  Spinocerebellar ataxia type 10 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.0   0.0   1.9e-34   3.4e-30       1      98 [.     326     424 ..     326     425 .. 0.98

  Alignments for each domain:
  == domain 1  score: 104.0 bits;  conditional E-value: 1.9e-34
  Atx10homo_assoc   1 fKrelvrllgnlvyknkevqdkvreldg.leliLsqcniDdnnPfirewailairnLlegneenqelvaeLeakgvvdeevLeelgleveided 93 
                      +Kre+v++++++++  +++qd vr+ +g l++iLsqcniDd nP++re ++l+ir+Ll++n++nq++va+L++ g+ ++e Lee+g++ +id++
       EPX73674.1 326 VKRECVHFITFASHLYPATQDIVRNTEGgLSVILSQCNIDDFNPYLREVSVLCIRYLLQNNPDNQAFVANLNPMGISKSEILEEVGYDSQIDDN 419
                      69**********************99877***************************************************************** PP

  Atx10homo_assoc  94 gklkl 98 
                      gk+kl
       EPX73674.1 420 GKVKL 424
                      ***98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (431 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       362  (0.0201908); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.30s 00:00:00.93 Elapsed: 00:00:00.53
# Mc/sec: 2434.35
//
Query:       EPX73675.1  [L=594]
Description: arrestin/PY protein 2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.1e-20   71.6   0.0    6.5e-18   65.5   0.0    2.3  2  Arrestin_C  Arrestin (or S-antigen), C-terminal domain
    1.2e-14   54.6   0.0    2.1e-14   53.8   0.0    1.3  1  Arrestin_N  Arrestin (or S-antigen), N-terminal domain
  ------ inclusion threshold ------
      0.012   15.3   0.0      0.026   14.2   0.0    1.5  1  LDB19       Arrestin_N terminal like


Domain annotation for each model (and alignments):
>> Arrestin_C  Arrestin (or S-antigen), C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.012        71      34     113 ..      54     146 ..      38     166 .. 0.70
   2 !   65.5   0.0   1.1e-21   6.5e-18       1     133 [.     184     325 ..     184     326 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.012
                 SEEEEEEEEEEEEEEEESS...........SEEEEEEEEEEEEE---............B-TTEE.EEEEEEE.----B-----S---EEEEEEEEEEE CS
  Arrestin_C  34 kkvkkikvslvqhvdvcafnr.........snkkeknvvaksdsvkv............tsaakdkletevelqiPeeltpssarnvelikvsYklkvk 111
                  +v++ik++l  ++ vc +++         + +++ n++       +            +  + +++e  +  q+P+++++s +  v + ++ Y+l  +
  EPX73675.1  54 IRVRNIKLRLAGRSFVCWSDEsknnsyggsKIRRQVNQI-------LdrqwsfllgdgtKTIQDGNYEYPFDYQLPPDIPESIE-RVPGCHIIYTLTAC 144
                 579999999999999999977775555333333333333.......2444456678887666667777667779999****997.99999999999888 PP

                 EE CS
  Arrestin_C 112 lt 113
                 l+
  EPX73675.1 145 LE 146
                 86 PP

  == domain 2  score: 65.5 bits;  conditional E-value: 1.1e-21
                 ----EEEEEEES-SEEETT--EEEEEEEE.E-SSSEEEEEEEEEEEEEEEESS.......SEEEEEEEEEEEEE---B-TTEE.EEEEEEE.--...-- CS
  Arrestin_C   1 wdgkvsleaslpkkgyvpGetipvtvkid.ndskkkvkkikvslvqhvdvcafnr.....snkkeknvvaksdsvkvtsaakdkletevelqiP...ee 90 
                 w+ kv++e s+p+k y++G++ip+++k+   ++++++ k+++ l ++++ + +++      +k++k+v+ak+  +++ +   d ++ ++ + iP    +
  EPX73675.1 184 WPSKVNYETSIPSKIYAIGSEIPINFKLYpLLKGLDIGKVTIVLKEYCSLFINSKtmsstGRKDFKRVLAKKTVPGL-AMIDDCWQDQIRIPIPdslGD 281
                 899**************************77**********************99****999*********888888.677777997788888844444 PP

                 B-----S---EEEEEEEEEEEEEEE...SSEEEEEEEEEEEEEB-- CS
  Arrestin_C  91 ltpssarnvelikvsYklkvkltls...gsggelslelPivlgsvp 133
                  t+++  + ++i+v++kl++++++    g+ +el+ +lP  l+++p
  EPX73675.1 282 CTQDC--DLNCIRVHHKLRLSISILnpdGHISELRNSLPLSLVISP 325
                 44477..899*************999875888***********998 PP

>> Arrestin_N  Arrestin (or S-antigen), N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.8   0.0   3.4e-18   2.1e-14      17     141 ..      41     165 ..      34     170 .. 0.80

  Alignments for each domain:
  == domain 1  score: 53.8 bits;  conditional E-value: 3.4e-18
                 -EEEEEEE-CCCCTT.CEEEEEEEEEEEESSSSTTTTCCCEEEEEEEEEEEEESTSSSSS.SSSSHHHHHHHH-TTEEEEEE---TTS--SECS.GEEE CS
  Arrestin_N  17 tvdGkvlleteelkkarkvkielsgkartgweesevagktfrkdltlkkkqeyleteksllkskkdsqekLpkGehafpFsfelPknlpsSfeG.kagg 114
                  ++G+v+l+  +++++r++k++l+g+  + w+++++++++  ++   +   ++l+ + s l    d++++++ G++++pF ++lP+++p S+e    ++
  EPX73675.1  41 RISGVVVLSISQPIRVRNIKLRLAGRSFVCWSDESKNNSYGGSKIRRQV-NQILDRQWSFLLG--DGTKTIQDGNYEYPFDYQLPPDIPESIERvPGCH 136
                 59******************************88876666666555554.5677766665544..799************************751569* PP

                 EEEEEEEEEECCC..E--C.CCEEEEEEE CS
  Arrestin_N 115 vrYevkvtldrpw..kidkkkkkvftVir 141
                 + Y++++ l+r++    + ++   f V+r
  EPX73675.1 137 IIYTLTACLERATipSTNLESALQFRVVR 165
                 ***********994433333444555655 PP

>> LDB19  Arrestin_N terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   4.4e-06     0.026      41     155 ..     102     210 ..      84     223 .. 0.68

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 4.4e-06
       LDB19  41 qkntkdlkvGsysyPfsylipGslpassslgsnaetkvkyeliavvvykdptprkgassskeellklamPikvkravlrgP.dkn...slrvfPPtelv 135
                    tk ++ G+y+yPf y +p ++p s +       ++ y l+a++    ++p     ++ e  l++    +v r++++   d +   s+    P ++ 
  EPX73675.1 102 GDGTKTIQDGNYEYPFDYQLPPDIPESIE--RVPGCHIIYTLTACLER-ATIPS----TNLESALQF----RVVRTIPPNSlDLMhsvSVSDIWPSKVN 189
                 3568999******************9999..677889*********98.44665....444555666....6666666543133210022224566666 PP

       LDB19 136 atavlPsvvyPksa.fplelk 155
                  +  +Ps +y +++ +p+++k
  EPX73675.1 190 YETSIPSKIYAIGSeIPINFK 210
                 666777777766432566665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (594 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       335  (0.0186848); expected 358.6 (0.02)
Passed bias filter:                      242  (0.0134977); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.20s 00:00:00.66 Elapsed: 00:00:00.61
# Mc/sec: 2943.43
//
Query:       EPX73676.1  [L=223]
Description: hypothetical protein SOCG_02894 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.053   13.0   0.1       0.08   12.4   0.1    1.2  1  Pox_F16   Poxvirus F16 protein


Domain annotation for each model (and alignments):
>> Pox_F16  Poxvirus F16 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   4.5e-06      0.08     131     199 ..      79     152 ..      71     160 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 4.5e-06
     Pox_F16 131 linmktldkkilkdfvrenfGsvekLlkiikknvlwlklvlaksekrrsn.....siirfkkfvskvkklkkle 199
                 l +  ++dk+il+ f    fGs + L+k i +n  +l++ ++k+ek+ +      + ++ k+ v k+++ k+++
  EPX73676.1  79 LTDASRDDKRILAWFFSRRFGSPKILMKHICHNGGYLNWAIKKTEKSIIFdnmtsNPQEAKRIVWKLQNQKPKH 152
                 66778999*************************************97554433334566788888888877766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (223 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       452  (0.0252106); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.27s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1620.28
//
Query:       EPX73677.1  [L=1004]
Description: sulfite reductase NADPH flavoprotein subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-70  237.4   0.0    2.8e-70  236.4   0.0    1.6  1  FAD_binding_1  FAD binding domain
    1.8e-07   31.8   0.0    5.1e-07   30.3   0.0    1.7  1  NAD_binding_1  Oxidoreductase NAD-binding domain
  ------ inclusion threshold ------
      0.039   14.3   0.0       0.13   12.6   0.0    1.9  1  FAD_binding_6  Oxidoreductase FAD-binding domain


Domain annotation for each model (and alignments):
>> FAD_binding_1  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  236.4   0.0   4.6e-74   2.8e-70       2     222 .]     616     828 ..     615     828 .. 0.98

  Alignments for each domain:
  == domain 1  score: 236.4 bits;  conditional E-value: 4.6e-74
                    --BTTB-EEEEEEEEEE---.-SS--EEEEEEE-TTBT----TT-EEEE-----HHHHHHHHHHHT--T..T-EEEEEESSTT..S--SSSSSEEH CS
  FAD_binding_1   2 pfdakkvflakvlknreLtkpesernvihveldisdsglkYetGdhlgvypsNneelVeellellgldpkadevvelkaldeesaekeprleptTl 97 
                    p+ +++v++++v++n++Lt+++++rn++h+e+d+ +sgl+Y++G++lgvy+ Nn+++V ++++ +gl++  +e+++++++       + ++e++T+
     EPX73677.1 616 PDVSERVYTVRVKSNKRLTPSTYNRNIFHIEFDLGNSGLTYDIGEALGVYGVNNKAHVVDFINEYGLNA--NELIQVPSIF-----YKDHWETRTV 704
                    78899****************************************************************..*********9.....5789****** PP

                    HHHHHHTB--SS---HHHHHHHGGG-SSHHHHHHHHHHHH-HHHHHTTTTT--HHHHHHHHHTT---TTS-HHHHHHHS-B---EEEEB-S-TTTT CS
  FAD_binding_1  98 rqalkyylditgppskqlleaLaefaseeeekqkLekLssdegakeykelklneartllevleefpsvklplefLlevlpqLkpRyYSiSssskvh 193
                     qal ++ldi+g+p+k+++e+La+++++e+e+++L +L+s+ ga ++k+++ +++ t+++vl+ef  +kl ++ L+ ++p +k+R+YSiSss+++h
     EPX73677.1 705 YQALSQNLDIFGKPTKKFYEQLAQYETDEKERADLDTLVSPVGAPDFKRRAEVDMLTYADVLKEFRQAKLNASDLAVIVPPIKRREYSISSSQRKH 800
                    ************************************************************************************************ PP

                    TTEEEEEEE--EE---SSS--EE-HHHHH CS
  FAD_binding_1 194 pdevhltvvVveyetdgegrirkGvcsny 222
                    +d+vhl++vVv+++ dg+gr+r+G+cs+y
     EPX73677.1 801 QDSVHLLIVVVDWK-DGMGRDRYGQCSHY 828
                    **************.7***********98 PP

>> NAD_binding_1  Oxidoreductase NAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.3   0.0   8.6e-11   5.1e-07       3     100 ..     861     961 ..     859     965 .. 0.74

  Alignments for each domain:
  == domain 1  score: 30.3 bits;  conditional E-value: 8.6e-11
                    EEGGGGHHHHHHHHHHHHHCT....TCSEEEEEEEESSGC.GSTTHHHHHHHHHHCTTEEEEEEEESSCTTTSSSEESSHHHHHHHHHHH....HS CS
  NAD_binding_1   3 agGtGiaPvrsvlraileeak....dktkvvlvyGnrtee.dllyreeleelakklpgrlkvvavvsreeagweggkgrvqdalleells....lk 89 
                    + GtG+aP+r++l+    +      + + vvl+ G rt++ + ly e++e++ +++      ++v  +  ++++  k ++qd ++   +     l 
     EPX73677.1 861 GLGTGLAPFRAFLQFKEWQ-RlqgiPSGDVVLYLGSRTQReEYLYGEDWEAYHAANLL----TYV-GQAFSRDQPYKIYIQDVMRSSKELlkktLV 950
                    55***********743332.2446799***********9989**********444333....344.344444445679999998664333558877 PP

                    STTEEEEEECS CS
  NAD_binding_1  90 keethvyvCGp 100
                    +e+  +y+CGp
     EPX73677.1 951 DEGGSFYLCGP 961
                    **********9 PP

>> FAD_binding_6  Oxidoreductase FAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   2.2e-05      0.13      48      90 ..     788     840 ..     771     849 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 2.2e-05
                    EEEEE.BSST.TECCEEEEEEE--.........TT-HHHHHHHCS-TT-EEEE CS
  FAD_binding_6  48 iRsYtpisse.nekGelellvkvy.........pgGkmsqaLdelkigdtlei 90 
                     R Y++ ss+ +++  + ll+ v+         + G+ s++L+ l++gd +++
     EPX73677.1 788 RREYSISSSQrKHQDSVHLLIVVVdwkdgmgrdRYGQCSHYLSGLQVGDPVTV 840
                    59***9999956999*****************99**************97764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1004 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       573  (0.0319594); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.73u 0.29s 00:00:01.02 Elapsed: 00:00:00.47
# Mc/sec: 6437.09
//
Query:       EPX73678.1  [L=574]
Description: ran GTP-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.9e-88  294.8   0.9    8.1e-88  294.4   0.9    1.2  1  Ran-binding  RanGTP-binding protein
  ------ inclusion threshold ------
       0.23   12.0   0.8        4.3    7.9   0.1    2.5  2  HisKA_3      Histidine kinase


Domain annotation for each model (and alignments):
>> Ran-binding  RanGTP-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  294.4   0.9   9.1e-92   8.1e-88       1     310 [.       1     306 [.       1     308 [. 0.92

  Alignments for each domain:
  == domain 1  score: 294.4 bits;  conditional E-value: 9.1e-92
  Ran-binding   1 mdelLa...kvgsqavsfAirsGislassyaikqvsrllkkvpedkkerkeleklqkkLeskikiispaidLieliaarGntsLesaveLtksLkkei 95 
                  mdel++   ++++ a sfAi+++is+a+++a++qvs+++k vp+ ++  +ele++++kL + i++++pai+Li++++++Gn+sL+s+ +L+++L+++i
   EPX73678.1   1 MDELFHvasHAATFATSFAIKHSISFAGKFAVQQVSSYIKCVPDADR--DELETMKAKLLEMIRVVTPAIELIDIMSSNGNQSLQSTRQLVDALRSDI 96 
                  78877411134444567**************************5555..************************************************* PP

  Ran-binding  96 eelgerleeaaekeekskk..keeekeelkkviedikeLLkrieeaiPllnLalttsGaslstslpksvSpsrLLqAstflsaadtqfaadkskevqv 191
                  e+++ ++  +a++ ++++    ++++e+  kv e++++LL ri++aiPllnL++ttsG s+s+slpks  +s+L++A++++ +a+ +f+ d  k++qv
   EPX73678.1  97 EKFSVHIVGVANADTEKEIsnPKRAEETKGKVLEEMRNLLLRIQDAIPLLNLSITTSGLSISSSLPKSTNFSQLFKANSHILHANLSFSGD--KPLQV 192
                  ********9998877655466888999999*******************************************************999766..8**** PP

  Ran-binding 192 GptFtlslYslFaghskekekeeeerkitWkEvlakarvkllrvplealakskkkeyaYeLeiiedldDgryHdeeeekpkklesipikqisklfysa 289
                  Gp+F+l +Y++F++h+++k  ++  ++i+W+E+++ +  k++r+p ++++ +k++  +Y+L++++++dD+ryH+e+e  p +++ i +++++ lf+s+
   EPX73678.1 193 GPAFRLRTYKIFESHAQSKFLNH--DSIIWQEDCSVCIGKVFRIPPQQSH-NKDSLLSYKLTLVQSFDDDRYHEENE-VPLSKD-IFLNNVQTLFFSV 285
                  *****************999887..589*****************99985.8999********************88.899999.************* PP

  Ran-binding 290 sGklLnleeenspvLllkrdk 310
                  sGklL+l++  +pv+llk+++
   EPX73678.1 286 SGKLLRLDDVMTPVILLKYKD 306
                  ******************976 PP

>> HisKA_3  Histidine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.1   0.00048       4.3      37      66 ..      66      95 ..      45      97 .. 0.80
   2 ?    1.8   0.0     0.039   3.5e+02      35      64 ..     111     140 ..     102     143 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.00048
                HHHHHHHHHHHHHHHHHHHHHHHHHHHTTH CS
     HisKA_3 37 kaaeqlreieelarealqevRrllhnLrpa 66
                 a e ++ + ++ +++lq +R+l+ +Lr++
  EPX73678.1 66 PAIELIDIMSSNGNQSLQSTRQLVDALRSD 95
                6788999999******************75 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.039
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT CS
     HisKA_3  35 pekaaeqlreieelarealqevRrllhnLr 64 
                  ek     +++ee+  + l+e+R+ll +++
  EPX73678.1 111 TEKEISNPKRAEETKGKVLEEMRNLLLRIQ 140
                 5555556678999999999****9998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (574 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       863  (0.0481343); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 4304.96
//
Query:       EPX73679.1  [L=647]
Description: translation release factor class II eRF3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.9e-46  157.1   0.0    5.9e-46  156.5   0.0    1.3  1  GTP_EFTU     Elongation factor Tu GTP binding domain
    2.7e-34  117.8   0.2    2.7e-34  117.8   0.2    1.9  2  GTP_EFTU_D3  Elongation factor Tu C-terminal domain
    2.8e-06   27.6   0.3    7.5e-06   26.3   0.3    1.8  1  GTP_EFTU_D2  Elongation factor Tu domain 2
     0.0011   19.1   0.1     0.0059   16.7   0.1    2.1  1  MMR_HSR1     50S ribosome-binding GTPase
  ------ inclusion threshold ------
      0.024   15.2  13.3      0.024   15.2  13.3    1.9  2  CEND1        Cell cycle exit and neuronal differentiation pro
      0.063   12.6   0.0        5.2    6.4   0.0    2.4  2  Gtr1_RagA    Gtr1/RagA G protein conserved region
      0.089   11.3   0.0       0.14   10.7   0.0    1.2  1  LCD1         DNA damage checkpoint protein


Domain annotation for each model (and alignments):
>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.5   0.0   2.3e-49   5.9e-46       1     188 [.     221     440 ..     221     485 .. 0.91

  Alignments for each domain:
  == domain 1  score: 156.5 bits;  conditional E-value: 2.3e-49
                 TCEEEEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHH.HHHST............HCHSHHHHHHTSCSSCEEEEEETTCSSEEEEEEEESSSGGGHHH CS
    GTP_EFTU   1 krirnigiighvDhGKtTLtdrLlyktgaiskkgeka.eeerv............lDtlkeErergiTiksaaisleketkkylinliDtPGHvdFske 86 
                 k+++ni++ighvD+GK+TL ++Ll  tg+++k+++++ e+++             lD+++eEre+g T+++  +++e  t++++++l+D+PGH+ ++ +
  EPX73679.1 221 KEHVNIVFIGHVDAGKSTLGGNLLVLTGMVDKRTMEKiEKDAKeagkeswalswaLDSTSEEREKGKTVEVGRAYFE--TEHRRFSLLDAPGHKGYVTN 317
                 689*********************************9844433578999****************************..******************** PP

                 HHHHHHT-SEEEEEEETTTB.......STHHHHHHHHHHHHTTTE.EEEEEESCGST.....HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTEEEEE CS
    GTP_EFTU  87 virglrvlDgavlvvdaveG.......vepqteevlrlalkegvp.iivfiNKmDrl.....kaelkeiveevkqklsrkeeklekygekgekevpvvf 172
                 +i+g++++D+ vlv++a++G          qt+e++ la+++g++ ++v+iNKmD++     ++++ke+v++++  l       +++g++++++v+ ++
  EPX73679.1 318 MINGASQADIGVLVISARRGefeagfeRGGQTREHAVLARTQGINhLVVVINKMDEPsvqwsEERYKECVDKLSVFL------RRVAGYNSKTDVKYMP 410
                 ***********************999999*****************************999999*********9666......55667777789***** PP

                 EBTTTTBTHH..............HHHHHH CS
    GTP_EFTU 173 gSalkgegvk..............tlleal 188
                 +Sa++g+++k              +lle+l
  EPX73679.1 411 VSAYTGQNLKdridssicswykgpSLLEYL 440
                 *******99966666666666666555554 PP

>> GTP_EFTU_D3  Elongation factor Tu C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.2       5.9   1.5e+04      97     106 ..     283     292 ..     283     293 .. 0.90
   2 !  117.8   0.2     1e-37   2.7e-34       1     111 [.     538     645 ..     538     646 .. 0.96

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 5.9
                  ECTTCEEEEE CS
  GTP_EFTU_D3  97 ReggrTvaaG 106
                  Re+g+Tv +G
   EPX73679.1 283 REKGKTVEVG 292
                  99*****998 PP

  == domain 2  score: 117.8 bits;  conditional E-value: 1e-37
                  --EEECCEEEEEEESSS..SS-BSTT-EEEEESSS-EEEEEEEEEEECCSSTTSB-BSS-SSCCSTT-CEEEEEEECCEEEE--TTTHCCCCEEEEEC CS
  GTP_EFTU_D3   1 sikphtkfeAqvyilekerhtpitagYrpvlyirtadvtgkvveLlskldkktekvsekkpefvkpGdnvivevelikpialekgseypqlGrFaiRe 98 
                  +++++t+f Aq++ile   ++++t+gY++v++++ta +++++++Ll+kldk t+++s+k p+f+++G+++ +e+e+++p+++e++++y+ +GrF++R+
   EPX73679.1 538 PVHATTRFIAQIAILEL--PSILTTGYTCVMHLHTAVEEVSFAKLLHKLDK-TNRKSKKPPMFATKGMKILAELETQTPVCMERFEDYQYMGRFTLRD 632
                  57899************..*******************************5.56677***************************************** PP

                  TTCEEEEEEEEEE CS
  GTP_EFTU_D3  99 ggrTvaaGvvtei 111
                  +g Tva+G+v +i
   EPX73679.1 633 QGATVAVGKVIKI 645
                  ***********98 PP

>> GTP_EFTU_D2  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.3   0.3   2.9e-09   7.5e-06       1      74 []     466     533 ..     466     533 .. 0.85

  Alignments for each domain:
  == domain 1  score: 26.3 bits;  conditional E-value: 2.9e-09
                  EEEEEEEEEESEEETTEEEEEEC.TCTTSEEEEEEEEEEEEETEEESEE..ETTSEEEEEEEESSCCSGSSTTCEEE CS
  GTP_EFTU_D2   1 GtvalgrvysGtlkkGdevrilg.ndtskkeivtrissletfhededea..vaganaGvivaikgledaiivGdtlt 74 
                  Gt+  g+++ Gt+kk++++ +++ n+t       ++++++ + +de++   ++g+++ ++v++++ +  ++ G +lt
   EPX73679.1 466 GTIFEGKIEAGTIKKNQNILVMPiNQT------LEVTGIYDE-ADEEISssICGDQVRLKVRGDDSD--VQSGYVLT 533
                  88999****************998866......*******99.66666678***********95544..79999986 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.1   2.3e-06    0.0059       1      87 [.     225     344 ..     225     370 .. 0.63

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 2.3e-06
                 EEEEEESTTSSHHHHHHHHH..................T.............STEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHHHHHH CS
    MMR_HSR1   1 evaivGrpNvGKStLinalt..................g.............ekaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseekglgk 68 
                 +++++G+  +GKStL   l+                  +             +    ++++g+T ++ ++ ++++++++ l+D pG  +    +  +++
  EPX73679.1 225 NIVFIGHVDAGKSTLGGNLLvltgmvdkrtmekiekdaKeagkeswalswalDSTSEEREKGKTVEVGRAYFETEHRRFSLLDAPG-HK----G-YVTN 317
                 589************988875666666666555555440555556655443224455677788888888888877899********.33....2.3666 PP

                 HHHHHHCTSEEEEEEETT........T CS
    MMR_HSR1  69 aflaleeadlillvvdas........e 87 
                  +    +ad+ +lv++a+        e
  EPX73679.1 318 MINGASQADIGVLVISARrgefeagfE 344
                 666677799999999988544433331 PP

>> CEND1  Cell cycle exit and neuronal differentiation protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   2.1         7   1.8e+04      19      56 ..      24      61 ..       9     105 .. 0.47
   2 ?   15.2  13.3   9.5e-06     0.024      17      88 ..     135     206 ..     118     220 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 7
       CEND1 19 aeakgkPaadgkaPsakadkketpaekqeqpaaPatap 56
                 ++   P+  ++aP+  ++ +  +   q+q +  a  p
  EPX73679.1 24 MSSAKAPSFTPTAPAFVPSFQRPSFVPQQQSNVAAGFP 61
                44444455555555544444444433333333333333 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 9.5e-06
       CEND1  17 ataeakgkPaadgkaPsakadkketpaekqeqpaaPatapakktpakadpallnnhsnlkPapaaaeapssp 88 
                 + + + +kPaa++ aP+a a+k+etp +  e+ +aP +  +kk   ++ pa  ++ s  k apa++e++   
  EPX73679.1 135 SISLGGAKPAAQAPAPAASATKEETPQKPTEDASAPQKVETKKPAETSSPAPAKQASEKKQAPATTESSTEV 206
                 4456779*******************9999*************7778999*************997765444 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0     0.014        36      34     141 ..     288     391 ..     264     416 .. 0.69
   2 ?    6.4   0.0     0.002       5.2      91     145 ..     554     609 ..     541     623 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.014
   Gtr1_RagA  34 tidveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDvesreleedletlkeilealr.qyspea.kvfvlihKmDliqedere 130
                 t++v +  ++ +++  ++l+D +G + +v+++++  ++    ++gvl  V+ ++  e+e  +e+  ++ e+++    + + ++ v i+KmD  + +  e
  EPX73679.1 288 TVEVGRAYFE-TEHRRFSLLDAPGHKGYVTNMINGASQ---ADIGVL--VISARRGEFEAGFERGGQTREHAVlARTQGInHLVVVINKMDEPSVQWSE 380
                 5555555553.45568999**********998765554...578887..68888778999988887776654314444442678899999988777666 PP

   Gtr1_RagA 131 eifeerkeeir 141
                 e ++e  ++++
  EPX73679.1 381 ERYKECVDKLS 391
                 66666655554 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.002
   Gtr1_RagA  91 leedletlkeilealrqyspeakvfvlihKmDliq.edereeifeerkeeireeie 145
                 l++ l+t  +++ +l++  +e+++  l+hK+D+ + ++++  +f ++  +i  e+e
  EPX73679.1 554 LPSILTTGYTCVMHLHTAVEEVSFAKLLHKLDKTNrKSKKPPMFATKGMKILAELE 609
                 56667788899**********************99445556678888777777766 PP

>> LCD1  DNA damage checkpoint protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   5.4e-05      0.14     475     525 ..     350     399 ..     343     426 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 5.4e-05
                 --TTHHHHHHHHHHHHHHHHHHHHHT-S-------TTTHHHHHHHHHHHHG CS
        LCD1 475 rsknldlrielieslvkliyylwiqeseelseeiikeleselvvaLsriaf 525
                 r + +  r + i++lv +i+++  + s + see +ke  ++l v L r+a 
  EPX73679.1 350 REHAVLARTQGINHLVVVINKMD-EPSVQWSEERYKECVDKLSVFLRRVAG 399
                 66778899***************.************************984 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (647 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1138  (0.0634726); expected 358.6 (0.02)
Passed bias filter:                      732  (0.0408277); expected 358.6 (0.02)
Passed Vit filter:                        76  (0.00423894); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.74u 0.29s 00:00:01.03 Elapsed: 00:00:00.47
# Mc/sec: 4171.63
//
Query:       EPX73680.1  [L=689]
Description: SNARE binding protein Sec1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   8.8e-108  362.0   0.6   1.3e-107  361.5   0.6    1.2  1  Sec1      Sec1 family


Domain annotation for each model (and alignments):
>> Sec1  Sec1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  361.5   0.6  7.1e-112  1.3e-107       1     573 [.      25     585 ..      25     586 .. 0.82

  Alignments for each domain:
  == domain 1  score: 361.5 bits;  conditional E-value: 7.1e-112
                 EEEEE-HHHHHHHHTT--HHHHHTTTEEETT..T.--S-.....BTTSEEEEEE-S-HHHHHHHHHHHHSS-SBS-EEEEESS---HHHHHHHHH..SG CS
        Sec1   1 KvLvlDkelskilssvlkvsdlleegVtkieklk.krepskrealphlkaiyflrptkenidrlakdfisarrykeyhifftprlseslleglakadee 98 
                 KvLv+D+++++i++ +++v+ llee++  +e l+  r p      ++++++y+l  +++ +d++ kd++  ++y  +hi+ft+r++ +++++l+++  +
  EPX73680.1  25 KVLVVDRKTADIINRFTSVHRLLEEKIAAVEILEnARTP-----NSSFEVLYILHCQDKLVDCIYKDQEYPNTYPGIHIMFTDRITPNIVDRLKNS--N 116
                 9**********************99***77777555555.....99********************99888***********************74..4 PP

                 .GGGEE.EEE----SEEEETTEEE-STTHHHHSTTG.....GG.......--HHHHHHHHHHHHHHH-..--EEEE-TT-.....HHHHHHHH...... CS
        Sec1  99 vvkkvk.lkelnldfvplesdlfslnpelplsfrdlyldndnsaleeeieslldriakgLlsvllslekkiPiirykgsa.....asmvakkladelke 191
                 + +k++ ++  +ldf  les+ f    + ++s+  ly  +++s     i+++l++ia g+lsv++s  +  P+ir++ ++     ++ ++  la +l++
  EPX73680.1 117 ITPKLRsVQIGYLDFSSLESRYFQV--HDEYSGLRLY--HPSS--APVIRQELSNIAHGILSVCVSF-GMAPNIRCYYPKsarhtSKTMSFILASQLRD 208
                 555555566**************99..4334444554..3444..235899****************.88******87777788866667778888888 PP

                 .....HHHHTTT.--SS--EEEEE-GGG-SSTTTS---BHHHHHHHHS--BTEEEEEE--SS...SEEEEEE--TT..-TTHHHHTTSBHHHHHHHHHH CS
        Sec1 192 kids.kknfese.ssrqrpvLiIlDRsvDlvtpllhqwTYqaliddllgglnnnnvvleeep...keekeaelvesssDeffaelrhlnfgevgeklkk 285
                  +d+  k+++ + +s+q+++ +I+DRs D v+p++h++ Yqa+i+dll+ ++++ +  + +     e++  +l+++  D++++++rh+++ +++e+l+ 
  EPX73680.1 209 IVDEyCKTHPGFqESSQKSTCLIVDRSLDTVSPFVHEFSYQAMIHDLLK-IKDESYPFSIMGphgLETRIGKLSDD--DSVYVKIRHMHMRDAIERLMG 304
                 8888777777778***********************************8.63333333333378889999999999..********************* PP

                 HHHHHHHHH.HTTT....-TTHHHHHHHHHH-GGGHHHHHHHHHHHHHHHHHHHHS-HHH.HHHHHHHHHHHH.SS--.B--..-HHHHHHHH..-TTS CS
        Sec1 286 eakeyqeen.ekkrn.gakesiadlkkfvaklpelqeekkklskHtnlaeellkevkkrkldellelEqdlat.gesdkkikekkvieeliad..dept 379
                 +++++ een  + ++ +a+ s++d++ ++a l ++qe+++++s+H+ +a+e+++ ++k++l++++ +Eqdlat + s + ++ ++v+ +l++   d++t
  EPX73680.1 305 DFNKFCEENtIFLDKgQAT-SLNDMRGMLAGLSDFQELRDEYSLHLAMAQECMNLFEKDNLLSIGAVEQDLATgA-SPEGKTPRNVLYDLLPLldDDKT 401
                 *********9888886665.*****************************************************63.23455566899999999965555 PP

                 -H.HHHHHHHHHHHH...-B.-HT--GG....GGHHHH...GGGGG........---.BGGG-------.......---------S...TT-----HHH CS
        Sec1 380 seledklRLlllyslvegglkekelkellrelvqsaly...gleylktlrsleklgllkkrkgkksskkksslklikeeedeesnydlsgvsryaPllv 475
                  e  dk+RLl+ly+ +++g+    l+++ r + + +           +l+++e+lg+ + +  ++ss k+  ++  +     e++y   ++sr++P l+
  EPX73680.1 402 HE-ADKIRLLILYIAYRDGV---ILQDMMRLFRH-SKLpshRQ---EILQNMEQLGVRNVKRLSDSSVKR--KEVANSLPAGEETY---ELSRFVPNLK 487
                 66.7************7788...44544443333.21222212...234555554443222222222222..23445555555555...7999****** PP

                 HHHHHHTTT-S-TTTS-BSS-GGGS----..----------------------S-EEEEEEEEEE-HHHHHHHHHHT...TSSSEEEEEEEEE--HHHH CS
        Sec1 476 rlvealikgkklssespslskkdpsqees..ssslrsakktnsaskesaekkkkqrviVffvGGvTysEiralrllskqekknkeiiigttsilnpksf 572
                  ++e+l++++++++ +p++++ +p++e +  ++slrs+++++++s++ a++  k++ +Vf++GG TysE+r++ ++++    nk+iiig+t   +p+++
  EPX73680.1 488 AVMESLVQDNLDKELFPFVRDLNPETEVEveQTSLRSSRPSWTRSRSMATRVPKEKFLVFMAGGTTYSELRSCYEIAEGL--NKNIIIGSTACNSPNEW 584
                 ***********************999998********************************************9999855..**********9999998 PP

                 H CS
        Sec1 573 l 573
                 l
  EPX73680.1 585 L 585
                 8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (689 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       579  (0.032294); expected 358.6 (0.02)
Passed bias filter:                      348  (0.0194099); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 4664.51
//
Query:       EPX73681.1  [L=267]
Description: single-stranded DNA binding protein Ssb2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.2e-18   64.8   0.1      2e-17   63.7   0.1    1.6  1  RPA_C            Replication protein A C terminal
    4.5e-07   29.8   0.1    7.1e-07   29.1   0.1    1.3  1  tRNA_anti-codon  OB-fold nucleic acid binding domain
  ------ inclusion threshold ------
      0.018   14.8   0.1      0.028   14.3   0.1    1.3  1  RMI2             RecQ-mediated genome instability protein 2
      0.079   13.0   0.0        0.2   11.7   0.0    1.6  1  UPF0147          Uncharacterised protein family (UPF0147)
        1.1    9.3   4.2         40    4.4   0.0    3.2  3  YqgC             Uncharacterized YqgC-like


Domain annotation for each model (and alignments):
>> RPA_C  Replication protein A C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.7   0.1   5.7e-21     2e-17      29     104 .]     184     258 ..     162     258 .. 0.77

  Alignments for each domain:
  == domain 1  score: 63.7 bits;  conditional E-value: 5.7e-21
                 XXXXXXXXXXXXXXXX.XSXHHHHHHHHHHHH.SXSTTTEEHHHHHHHSTSXHHHHHHHHHHHHHTTSEEESSSTT CS
       RPA_C  29 mgtdgalsgnqaklankgltalaqqvlnlikqspeseeGvhvdeiaqklrlsvndvkqavdeLsneGiiYsTiDde 104
                   +   +++ ++kla+++lt+++++v+++i+++p ++eGvh++++aq++  +  d++ ++d+L++eGiiY+TiD++
  EPX73681.1 184 APSAPVANSLEQKLAEYSLTPTQMIVMQAIHNAPDTNEGVHARQLAQSV-GPGIDLTAVTDFLQQEGIIYTTIDEN 258
                 22233345566778889********************************.9***********************96 PP

>> tRNA_anti-codon  OB-fold nucleic acid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1   0.1     2e-10   7.1e-07       1      66 [.      75     135 ..      75     159 .. 0.84

  Alignments for each domain:
  == domain 1  score: 29.1 bits;  conditional E-value: 2e-10
                      EEEEEEEEEEEEEEETTEEEEEEEETTEEEEEEEETHHHHHHHTTS-TTSEEEEEEEEEECTTSSE CS
  tRNA_anti-codon   1 VtvaGrvtsisdrsggkvifidlrDgtgriqvvlfreeatklaenlkeGdvvrvtGrvkrrpggel 66 
                      Vt++G +++i   +     +++++Dgtg+i+v  +     + +++l  +++vrv+G +k + g+ +
       EPX73681.1  75 VTFVGVLRNI--HQQTTNTTYQIEDGTGMIEVRHWE--HIDALSELATDTYVRVYGNIKVFSGK-I 135
                      89********..9999********************..9**********************888.3 PP

>> RMI2  RecQ-mediated genome instability protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.1   7.7e-06     0.028      34     113 ..      67     147 ..      42     162 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 7.7e-06
        RMI2  34 reglevsrvWlQGtvvevdaske..sllldDgtgvfvveglnelpktkkclkeGkYVmVvGvvqssspepvlkavKvvdLse 113
                   g+ev +v   G++ +++++++  +  ++Dgtg++ v+  +++ + + +l++  YV V G ++  s +  +    ++++ +
  EPX73681.1  67 IDGVEVGQVTFVGVLRNIHQQTTntTYQIEDGTGMIEVRHWEHIDALS-ELATDTYVRVYGNIKVFSGKIYIASQYIRNIKD 147
                 556666666667777666666556699*****************9999.99************8888775555555555554 PP

>> UPF0147  Uncharacterised protein family (UPF0147)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   5.5e-05       0.2      21      72 ..      80     131 ..      77     133 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 5.5e-05
                 S-HHHHHHHHHHHHHHT-TTS-HHHHHHHHHHHHHHHHT-TTS-HHHHHHHH CS
     UPF0147  21 vPrniRraakeakekLkdekeslavraataisiLdeisnDpnmPlhaRtliw 72 
                 v rni +++++++ +++d +  ++vr  + i +L e++ D  + ++  ++++
  EPX73681.1  80 VLRNIHQQTTNTTYQIEDGTGMIEVRHWEHIDALSELATDTYVRVYGNIKVF 131
                 77**************************************999888777665 PP

>> YqgC  Uncharacterized YqgC-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0     0.011        40      12      34 ..      38      60 ..      32      62 .. 0.88
   2 ?    3.9   0.3     0.016        59      14      32 ..      71      89 ..      66      95 .. 0.86
   3 ?    0.2   0.0      0.22   7.9e+02      22      35 ..     140     153 ..     134     156 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.011
        YqgC 12 DaeCGerirtRtvRqvkqqttvh 34
                    G++ r  t++q+   t vh
  EPX73681.1 38 QQGIGNKLRPVTIKQILDATQVH 60
                5567999***************9 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.016
        YqgC 14 eCGerirtRtvRqvkqqtt 32
                e G+  +   +R ++qqtt
  EPX73681.1 71 EVGQVTFVGVLRNIHQQTT 89
                6788889999********9 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.22
        YqgC  22 RtvRqvkqqttvhY 35 
                 + +R +k +  +hY
  EPX73681.1 140 QYIRNIKDHNEIHY 153
                 679**********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (267 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       713  (0.039768); expected 358.6 (0.02)
Passed bias filter:                      513  (0.0286129); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1941.75
//
Query:       EPX73682.1  [L=507]
Description: G-protein coupled receptor Git3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-44  150.9  15.9    3.8e-44  150.9  15.9    1.8  3  Git3        G protein-coupled glucose receptor regulating Gpa
    5.1e-05   23.3   0.6     0.0002   21.4   0.1    2.3  2  GPR_Gpa2_C  G protein-coupled glucose receptor regulating Gpa


Domain annotation for each model (and alignments):
>> Git3  G protein-coupled glucose receptor regulating Gpa2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.9  15.9   4.2e-48   3.8e-44       3     202 .]      43     240 ..      41     240 .. 0.94
   2 ?   -2.4   0.3      0.39   3.5e+03      40      40 ..     448     448 ..     400     488 .. 0.56
   3 ?   -2.6   0.2      0.44     4e+03      34      58 ..     477     501 ..     448     504 .. 0.48

  Alignments for each domain:
  == domain 1  score: 150.9 bits;  conditional E-value: 4.2e-48
        Git3   3 klrilaitassvsilaglvalylllaidkrrr...vfRheLillLilvdllkalvlliypvkvlvenkvyassafcqvvGfflavaiegsdlailllav 98 
                 +lr+++i+a+s+si ++lv ++l ++    r+   +fR +L++ L++v +++++v+l++p + + +  +++  + c+++Gffl v  ++sd++il+ ++
  EPX73682.1  43 RLRYMVIAATSISIGFCLVIVFLRWFRRWFRQkaiTFRDQLHITLFVVLCIRSIVQLLHPSISIHRPFFWDPATRCFTLGFFLLVLLRMSDYWILINVI 141
                 6899*************9999988874322223459*************************************************************** PP

        Git3  99 htallvfkpnlrnkksknvegGLykyrkyvyvisvlvplllasLafinakregYkplsawcylpeepvwyrlvlswiprYiivvaivaiyisiyiyvrr 197
                 h+allv++p    ++ +  +gGLy++r++vy +s+++p ++++Laf+n  + ++++ ++ c++p +p +y   l+w+++Y+++ +i+++ ++++i++rr
  EPX73682.1 142 HNALLVLNP----TSIDVDHGGLYRFRHTVYGLSIVFPFTVGALAFTN-YESTFVNFQTRCFIPFRPARYYWGLNWGFDYFLTTIIFTLHLCMFISIRR 235
                 *********....7788889****************************.99************************************************ PP

        Git3 198 eikkl 202
                 ++k++
  EPX73682.1 236 KVKQF 240
                 **985 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.39
        Git3  40 L 40 
                 +
  EPX73682.1 448 F 448
                 2 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 0.44
        Git3  34 rvfRheLillLilvdllkalvlliy 58 
                  vf ++  ++Li++ l k +v++ y
  EPX73682.1 477 YVFFKKKKYNLIVHYLKKPFVQMHY 501
                 2333333455555555555555555 PP

>> GPR_Gpa2_C  G protein-coupled glucose receptor regulating Gpa2 C-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       0.4   3.6e+03      25      38 ..     172     186 ..     166     196 .. 0.73
   2 !   21.4   0.1   2.2e-08    0.0002       1      59 [.     399     459 ..     399     476 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.4
  GPR_Gpa2_C  25 wlfPfvahvlqyd.y 38 
                  +fPf + +l++  y
  EPX73682.1 172 IVFPFTVGALAFTnY 186
                 589999999988734 PP

  == domain 2  score: 21.4 bits;  conditional E-value: 2.2e-08
  GPR_Gpa2_C   1 kkrrkqierqlrsifiYPlaYiilwlfPfvahvlqydye..lkekpviwllvvaavvqpln 59 
                 kk+rk++ rq + +f+YP ++ ++w  P +  ++  + +  +  ++   ++++a++   + 
  EPX73682.1 399 KKQRKRVLRQSKVLFAYPAVFFVMWFLPQLRYIVTLANSknECSGSCKNFAYIAIFCDNFA 459
                 6899************************999988887551246778888999999887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (507 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1190  (0.0663729); expected 358.6 (0.02)
Passed bias filter:                      580  (0.0323498); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.31s 00:00:00.90 Elapsed: 00:00:00.45
# Mc/sec: 3356.79
//
Query:       EPX73683.1  [L=406]
Description: meiotic recombination protein Rec7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   1.7e-135  451.2   8.4     2e-135  451.0   8.4    1.0  1  Meiotic_rec114  Meiotic recombination protein rec114


Domain annotation for each model (and alignments):
>> Meiotic_rec114  Meiotic recombination protein rec114
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  451.0   8.4  1.1e-139    2e-135       1     328 []       1     401 [.       1     401 [. 0.91

  Alignments for each domain:
  == domain 1  score: 451.0 bits;  conditional E-value: 1.1e-139
  Meiotic_rec114   1 mniypiakysvaedsytldsssidWshysdggftlsltsgLlqirqreeLiqsinLldswhqliPgtkeksLvllskaPiinirvisnnllkrfq 95 
                     mn+ypiakysva+dsy+++sss++Wshysdgg+t+sltsgLlqir+reeL+qs+nL+d+whq+iPgtke+sLvllskaP++n+r++snn++krfq
      EPX73683.1   1 MNFYPIAKYSVAQDSYGYESSSTSWSHYSDGGYTMSLTSGLLQIRRREELVQSLNLIDLWHQFIPGTKERSLVLLSKAPCMNFRIYSNNVTKRFQ 95 
                     8********************************************************************************************** PP

  Meiotic_rec114  96 vklPsDveymkakvelenLglvlkdarsssekkqlsnsqsqsnnsqelvl...lnea.vnkssatqPnislqaqsiimsqt.............. 172
                     vk+PsDv+ymkak+e+enLgl++kdarsssekkq+s sqs ++nsqe+++   +n + v+ ss  qP+is+q+++i +sqt              
      EPX73683.1  96 VKFPSDVFYMKAKLEIENLGLYFKDARSSSEKKQMSSSQSHIGNSQEMYMaasMNAGgVHASS--QPTISVQTPTI-LSQTipatppvaapggtv 187
                     **************************************************9999876155555..***********.****************** PP

  Meiotic_rec114 173 ...................sseesttesn..natniaahaplkrv.......lpyaevfattps.........lksir.....gdagrretsies 225
                                        s+   tt++n   a++++ h+p+kr+       + y++++a+tps         l+sir        gr+et++es
      EPX73683.1 188 gmgggmvaaappaasssssSQGAMTTTTNhvAASEMTVHTPYKRArvdeigsMGYSQIPASTPSaassssggvLTSIRpsqngQMMGRQETNMES 282
                     ***************9965333334444422689**********999*****************9********9****988744568******** PP

  Meiotic_rec114 226 iqisqqPlwdenvvisssplnpsqysvvaatPlasqtq................avtlaqpenlivqalanllpsPPtts...svLPnelteeek 301
                     iq+sq   w++  +isssp++psqys+vaatPl+sq+                   +++       ++++n+lpsPPtts    +  n+lteeek
      EPX73683.1 283 IQMSQPAHWEDGTAISSSPYHPSQYSMVAATPLGSQNPgipiaslmtpmqenpaPPVVT---TGTNSSYMNMLPSPPTTSspsTISANHLTEEEK 374
                     ****8889*****************************9999977554444433211111...223489***********988778999******* PP

  Meiotic_rec114 302 lLrekilfyleqesflqlvqsLdrvWa 328
                     lLr+k+lfyl+q sflql+qsLdr+W+
      EPX73683.1 375 LLRDKVLFYLQQSSFLQLCQSLDRIWT 401
                     **************************5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (406 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       696  (0.0388198); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 2826.41
//
Query:       EPX73684.1  [L=351]
Description: 3',5'-bisphosphate nucleotidase/inositol-1,4- bisphosphate 1-phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-53  182.3   0.0    1.7e-53  181.9   0.0    1.1  1  Inositol_P  Inositol monophosphatase family


Domain annotation for each model (and alignments):
>> Inositol_P  Inositol monophosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  181.9   0.0   9.7e-58   1.7e-53       1     264 [.      42     335 ..      42     343 .. 0.88

  Alignments for each domain:
  == domain 1  score: 181.9 bits;  conditional E-value: 9.7e-58
                 CCHHHHHHHHHHHHHHHHHHHHHTTTSEEEESTTT..CCHHHHHHHHHHHHHHHHHHHH.HHHHSTTSEEEHHCHHHHCC..CT.SSSSSEEEEEEEEE CS
  Inositol_P   1 dleevtkaavelaakagevlreefsenelvieeks..kegeedlvtaadeaveelilea.laekfpshkilgeetlakge..kseltedgltwivDPiD 94 
                 d+++vt  +++++a ++++l+++f+++++v ee+    ++++d++++++  v+e i ++  ++++ + k   e+ l++++  +++++++g++w +DPiD
  EPX73684.1  42 DKSPVTIGDFGAQAVVIALLKDAFPKDPIVGEEDAdyLRSNKDTCSRVWSLVQESIQQSkERQELGQIKD-AEQMLSIIDqgNYTGGREGRMWTLDPID 139
                 6899******************************99989********************53333333333.34455555567***************** PP

                 THHHHHHT-SG-EEEEEEEETTEEEEEEEEET.T...........TTEEECEETTTEEEETC......EEEEECTTS...EGGGTEEEEEESSSSSSHH CS
  Inositol_P  95 GTknFvrgipqvaVsigllvegkpvlGviaqP.l...........lgqlysaakgkGaflng......eklplsrap...piseallvtlfavssrkdt 172
                 GTk+F+rg  q+a+++ l+++gkp +++i +P l           +g ++sa +g+G+f         ++ +++ ++   p +++++++ +a++s + t
  EPX73684.1 140 GTKGFLRG-AQYAICLSLIENGKPMVSAISCPnLpfdfkqpetshKGVIMSAIRGQGSFQYAlhdltaKPTQVHMKDvqdPKESKFCEGVEAGHSMQGT 237
                 ********.8**********************637799******999*************9998888855666655577999999999*********** PP

                 HHCHHHHHHHCCCCCHEEEBESSHHHHHHHHHHTSTSEEEEEC......EBHHHHHHHHHHHHHTTEEEEESSSC......SSSTTSSEEEEESCHHHH CS
  Inositol_P 173 seasllekvesavsaegvrsvgssalklaavaeGkadaylefg.....rekkWDhAAGeaileeaGGvvtdakge......grlllargiiaanqkela 260
                 +e  +++k++++v  +     ++s++k++ +a+G+ d+yl+ +     +ek+WDhA+G++++eeaGGvv d+ g+      gr+l+++++++a+ k + 
  EPX73684.1 238 QE--EIAKKLGIVYGP---TKMDSQAKYVSLARGDGDIYLRLPtsmafEEKIWDHAGGSLLVEEAGGVVSDMFGKpldfgvGRTLKNNNGVIAAYKGIF 331
                 **..************...678********************999******************************999999888888777777755555 PP

                 HHHH CS
  Inositol_P 261 ella 264
                 + ++
  EPX73684.1 332 KNVI 335
                 5555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (351 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       393  (0.0219198); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2700.80
//
Query:       EPX73685.1  [L=296]
Description: RNA export factor Rsm1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      2e-24   86.1  10.8    5.6e-22   78.2   1.7    3.2  2  zf-C3HC      C3HC zinc finger-like
      8e-12   45.2   7.1    4.1e-10   39.7   0.6    3.1  3  Rsm1         Rsm1-like
     0.0045   17.6   5.5       0.78   10.4   0.4    2.5  2  BIR          Inhibitor of Apoptosis domain
  ------ inclusion threshold ------
      0.051   13.5   1.3        1.7    8.6   0.0    2.7  2  zf-C2HC_2    zinc-finger of a C2HC-type
       0.13   12.0   0.0       0.21   11.3   0.0    1.2  1  Pox_RNA_pol  Poxvirus DNA-directed RNA polymerase, 18 kD subu
       0.16   11.9   0.0       0.32   10.9   0.0    1.5  1  MtrG         Tetrahydromethanopterin S-methyltransferase, sub


Domain annotation for each model (and alignments):
>> zf-C3HC  C3HC zinc finger-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.2   1.7   1.9e-25   5.6e-22       2     107 ..      41     149 ..      40     174 .. 0.86
   2 !    9.3   2.0   0.00036       1.1      19      92 ..     187     249 ..     175     276 .. 0.77

  Alignments for each domain:
  == domain 1  score: 78.2 bits;  conditional E-value: 1.9e-25
     zf-C3HC   2 wdredllrRlkTfkalkW.tskpselselkcAkrGWkcvskdrlkCevCgaslvlkl...ksseeesdeqlnkklaekylkqlveaHeenClWrnkecp 96 
                 w+ +d+lrRlkT+++  W    +++l e++c++ GW c s d+l+C+ C++++ l++       +e++ +l +k+ ++++++l+++H++ Cl+++ ++p
  EPX73685.1  41 WSLKDFLRRLKTYRNR-WsLTYDPKLGEVNCCRHGWLCDSYDKLTCDICNRRIDLNFlqnIIDSNELSWELPQKVRDRIEQSLIHEHQDGCLYKKMSFP 138
                 999***********99.989999*********************************97654556778889***************************** PP

     zf-C3HC  97 esleslplakp 107
                 e +++l +  +
  EPX73685.1 139 ENIYELNISTE 149
                 ***99985443 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00036
     zf-C3HC  19 W.tskpselselkcAkrGWkc.vskdrlkCevCgaslvlklksseeesdeqlnkklaekylkqlveaHeenClWrn 92 
                 + +s++  ls + +A  GW+   s +  +Ce C++++ +  +              +++ + +++++H+ nC+Wr 
  EPX73685.1 187 YdISNDHCLSVVGIALTGWTEqLSGQLYECEYCHRRVGVW-N------------LQQDDQSFDVIDQHRLNCPWRR 249
                 45677888999999*****9956778889******99999.2............2222333456667777777775 PP

>> Rsm1  Rsm1-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.59   1.8e+03      32      75 ..       7      46 ..       6      61 .. 0.69
   2 !    7.9   0.3    0.0011       3.3      18      65 ..      81     137 ..      56     159 .. 0.76
   3 !   39.7   0.6   1.4e-13   4.1e-10       4      68 ..     200     255 ..     197     267 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.59
        Rsm1 32 WmfkskedgelsvvkrldvleeHleycPwknakaqkelakesea 75
                W fk+  d+     +++d  +eH+  + ++n + + + ++ ++ 
  EPX73685.1  7 WEFKEVLDQ----LDKVDERTEHVLASTIENSSCKYKAWSLKDF 46
                555554444....7788888889888888888887777766655 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0011
        Rsm1  18 glvsCeaCfrrlGLWmfkskedgels.......vvkrl..dvleeHleycPwknaka 65 
                   ++C++C rr+ L   ++  d+++        v +r+  ++++eH + c +k ++ 
  EPX73685.1  81 DKLTCDICNRRIDLNFLQNIIDSNELswelpqkVRDRIeqSLIHEHQDGCLYKKMSF 137
                 4579**********8888876664446888888555552257999999998887765 PP

  == domain 3  score: 39.7 bits;  conditional E-value: 1.4e-13
        Rsm1   4 lalfGWdsltssrlglvsCeaCfrrlGLWmfkskedgelsvvkrldvleeHleycPwknakaqke 68 
                 +al GW+   s+  +l  Ce C+rr+G W+ ++ +++       +dv+++H+  cPw+ a  +++
  EPX73685.1 200 IALTGWTEQLSG--QLYECEYCHRRVGVWNLQQDDQS-------FDVIDQHRLNCPWRRAFRNSQ 255
                 79****987665..5789*************998877.......*************98876665 PP

>> BIR  Inhibitor of Apoptosis domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.7   0.00072       2.2       1      50 [.      49      93 ..      49     100 .. 0.91
   2 !   10.4   0.4   0.00026      0.78      18      71 ..     195     247 ..     182     249 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00072
         BIR  1 RlatFkknWpeskkeakpsaeeLaeaGFyytptseskdnvqCfyCklald 50
                Rl+t++++W  +  ++k+ + +  + G+ ++      d+++C +C++++d
  EPX73685.1 49 RLKTYRNRWSLTY-DPKLGEVNCCRHGWLCDSY----DKLTCDICNRRID 93
                9****99***876.67999999********999....*********9875 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00026
         BIR  18 psaeeLaeaGFyytptseskdnvqCfyCklaldgw..eedDdpleeHkkhspkCef 71 
                 +s   +a +G+  + +    +  +C yC++++  w  ++dD+ ++   +h+ +C++
  EPX73685.1 195 LSVVGIALTGWTEQLS---GQLYECEYCHRRVGVWnlQQDDQSFDVIDQHRLNCPW 247
                 5555556666655555...8899*********999666788888888888888887 PP

>> zf-C2HC_2  zinc-finger of a C2HC-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.3     0.036   1.1e+02       4      10 ..      84      90 ..      83      91 .. 0.87
   2 ?    8.6   0.0   0.00058       1.7       1      17 [.     212     228 ..     212     230 .. 0.85

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.036
   zf-C2HC_2  4 pCpkCgR 10
                 C +C+R
  EPX73685.1 84 TCDICNR 90
                6****** PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00058
   zf-C2HC_2   1 elvpCpkCgRsFnpdrl 17 
                 +l +C++C R+ +++ l
  EPX73685.1 212 QLYECEYCHRRVGVWNL 228
                 5789*******999966 PP

>> Pox_RNA_pol  Poxvirus DNA-directed RNA polymerase, 18 kD subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   6.9e-05      0.21       9      75 ..      96     166 ..      91     176 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 6.9e-05
  Pox_RNA_pol   9 ylpvtlepheltldvrenikeavlreylhkesgGimakkieived.kelplg.eivnnevvvk..vpclvt 75 
                  +l+ +++ +el+ ++ +++++ + ++ +h  + G + kk++  e+ +el ++ ei+n +  +k   pc v+
   EPX73685.1  96 FLQNIIDSNELSWELPQKVRDRIEQSLIHEHQDGCLYKKMSFPENiYELNIStEILNAKRRIKrtSPCSVQ 166
                  788899**********************************9987745777643788876544322677776 PP

>> MtrG  Tetrahydromethanopterin S-methyltransferase, subunit G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00011      0.32       9      34 ..       6      31 ..       1      37 [. 0.83

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00011
        MtrG  9 pddfnevkkrLdeieekvefvnsEia 34
                  +f+ev ++Ld+++e+ e v +  +
  EPX73685.1  6 DWEFKEVLDQLDKVDERTEHVLASTI 31
                459****************9988655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (296 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       773  (0.0431145); expected 358.6 (0.02)
Passed bias filter:                      463  (0.0258241); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.48
# Mc/sec: 1862.89
//
Query:       EPX73686.1  [L=510]
Description: TORC1 subunit Tco89 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.4e-23   81.8  17.1    1.4e-12   47.4   2.9    2.3  2  TCO89     TORC1 subunit TCO89


Domain annotation for each model (and alignments):
>> TCO89  TORC1 subunit TCO89
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.3   5.7   1.2e-14   2.1e-10       1     228 [.      34     237 ..      34     241 .. 0.68
   2 !   47.4   2.9   7.9e-17   1.4e-12     448     546 ..     346     437 ..     297     472 .. 0.78

  Alignments for each domain:
  == domain 1  score: 40.3 bits;  conditional E-value: 1.2e-14
       TCO89   1 rqFstkSraK...ssasfkglqkLrrvlshdgalere.slstkhgslkkskssdaLykrralsgLnmtalvgtlsgPvslhslsssvgkkGLiprrnrk 95 
                 + F+++Sr K   s+ ++ + +k+    s++  l+r  s++++++ +  + +  +L ++r+l++Ln +       g         + +k GLip ++rk
  EPX73686.1  34 KGFVVNSRIKrggSHLRLARPGKISAASSRPNVLTRTtSHNPNYDRIHSTHA--TLPRQRSLNDLNDLH------G------TRAATAKTGLIPLTQRK 118
                 569*********9**********************************97776..7***********987......3......335899*********** PP

       TCO89  96 thsvldLhdsdeavDndSttde.EvEsF.tdeeedeAqdddksnntqknspkqersfsedevvkdrlsvesdslrklsepnsdkPlsrlrnrvdsdskl 192
                 ++ v++    + + DndSt+++ + Es  td  e e  +    n  q n+ ++++ ++e++         +  +++++ + ++   +      +  s l
  EPX73686.1 119 PKLVWE----EVTNDNDSTAGNfDTESVrTDLPETENHNPPPLNAAQPNEDQSRK-IQEGN-------TTVLIPKEDQTTSEGVNKT----EHENVSSL 201
                 ******....7778*******9334443355555555555445544444444444.33333.......2333445555444444222....22222333 PP

       TCO89 193 tssravkPmdhdkidpsksrnkdfdksassdkikas 228
                   s+      + +i+  k+r  + +  +ssd+ ka+
  EPX73686.1 202 NISLPPATATESSIKEEKTRLGNVNAQSSSDQHKAV 237
                 323333334556777777777777777777766655 PP

  == domain 2  score: 47.4 bits;  conditional E-value: 7.9e-17
       TCO89 448 ndfssFLksedvdgdSRTQrKlllQResSilDlnsqn.dsaeavflasnievkreferisheYtnvrRfsnplaesLerisqsk.siektqqkkinngl 544
                 +d++         ++SRTQ+Kll+QR+sS +D  +++ + +++++   +++ k++ + +++  +nv + ++ + e+L +++    s+e++    ++n +
  EPX73686.1 346 YDIGA--------STSRTQQKLLIQRASSRFDTAEDDpNANPSKRY-LHPQAKQITDSVRTHLRNVIKNREIVYEFLIKLRPFViSSEIEDFSSSSNPF 435
                 44444........89**********************9999***99.8********************************9644144444444444444 PP

       TCO89 545 na 546
                  +
  EPX73686.1 436 TS 437
                 43 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (510 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       702  (0.0391544); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.31s 00:00:00.95 Elapsed: 00:00:00.49
# Mc/sec: 3128.97
//
Query:       EPX73687.1  [L=337]
Description: AGC/YANK protein kinase Ppk33 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      2e-56  191.3   0.0    2.5e-56  191.0   0.0    1.0  1  Pkinase         Protein kinase domain
      7e-31  107.4   0.0    8.9e-31  107.1   0.0    1.1  1  Pkinase_Tyr     Protein tyrosine kinase
    6.4e-07   29.0   0.0    0.00023   20.6   0.0    2.3  2  Kinase-like     Kinase-like
    3.5e-06   26.0   0.0    5.8e-06   25.3   0.0    1.2  1  Pkinase_fungal  Fungal protein kinase
     0.0023   17.3   0.0     0.0037   16.6   0.0    1.2  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
     0.0024   17.9   0.0     0.0067   16.4   0.1    1.6  2  APH             Phosphotransferase enzyme family
     0.0038   16.9   0.1        1.6    8.3   0.0    2.2  2  FTA2            Kinetochore Sim4 complex subunit FTA2
     0.0043   16.1   0.0     0.0069   15.5   0.0    1.3  1  Seadorna_VP7    Seadornavirus VP7
  ------ inclusion threshold ------
      0.015   14.2   0.1      0.022   13.7   0.1    1.3  1  Haspin_kinase   Haspin like kinase domain


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  191.0   0.0   1.2e-59   2.5e-56       4     256 ..      33     291 ..      30     298 .. 0.88

  Alignments for each domain:
  == domain 1  score: 191.0 bits;  conditional E-value: 1.2e-59
                 EEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHHHHH CS
     Pkinase   4 leklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseeeakk 102
                  + +G+Gs ++V+ ++++++++++A+K+i+k+k +  k k++l+E+++l++l+hp ++r+y+ f++++++ylv +++ gg+l  ++  +  ++e+ +  
  EPX73687.1  33 CNVVGKGSWSTVFVVKDRSSKQKFALKCINKKKHNPGKIKQLLTEVSLLRSLDHPLLCRFYSEFQDDNKIYLVSDLMLGGDLRYHIA-QNRFQESVVCV 130
                 5789**********************************************************************************7.689******** PP

                 HHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.....BCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-S CS
     Pkinase 103 iakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.....ltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgkpp 196
                 ++++++++l y+Hskgi+HrD+Kp+NiL+de g+ +++DF +a++l+++++     ++ +vgt+ Y++PE l +    +++D+WslG+++ye l ++ p
  EPX73687.1 131 WIAELASALIYIHSKGILHRDIKPDNILLDEYGHCRLVDFNVASRLSQQTPdgkgfVKGRVGTPAYMSPETLVHAISYRESDWWSLGITMYECLLQTRP 229
                 ************************************************9999********************9888899******************** PP

                 TTTSSHHHHHHHHHHTHHHHHHHCT..SHH...HHHTTS...-HHHHHHHHHHT-SSGCCSTTHH CS
     Pkinase 197 fsgekgkekvekeldqlekilkilg..etkeklpeasei...seeakdllkkllkkdpkkRltae 256
                 fs++   + +++  +   +   +l+  +++++l++++++   s+ea+  ++  l+   k+R++ +
  EPX73687.1 230 FSSTMVVNWIRSSEK---EKNSLLEtmCSSLELRNNKQLdvlSKEARVAIQGFLEPSIKNRFGHN 291
                 **4444433333333...333333334444455555544566*************9999998765 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.1   0.0   4.5e-34   8.9e-31       3     221 ..      32     245 ..      30     261 .. 0.84

  Alignments for each domain:
  == domain 1  score: 107.1 bits;  conditional E-value: 4.5e-34
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEE.STTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtl.keeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekek 99 
                  l + +G+G++++V+  + +    ++++k a+K++ k++++  + ++ll+e++++++l+hp + +++    +++++++v +++ gGdL+ ++ ++   +
   EPX73687.1  32 LCNVVGKGSWSTVFVVKDR----SSKQKFALKCInKKKHNPGKIKQLLTEVSLLRSLDHPLLCRFYSEFQDDNKIYLVSDLMLGGDLRYHIAQN---R 122
                  6678899999999877766....8999*******4455666779***********************************************999...9 PP

                  SBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEE..EETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHH CS
  Pkinase_Tyr 100 ltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddey..vkkeeaklpvkWmapEslkekkftsksDvWsfGvll 195
                  ++ + ++ +++++A+++ y++sk ++Hrd+   N+Ll+e  ++++ Df +a++++++        +++     +m+pE+l +     +sD Ws G+++
   EPX73687.1 123 FQESVVCVWIAELASALIYIHSKGILHRDIKPDNILLDEYGHCRLVDFNVASRLSQQTPDgkGFVKGRVGTPAYMSPETLVHAISYRESDWWSLGITM 220
                  99999***********************************************995444432233344556779************************* PP

                  HHHHTTSSGTTTTSHHHHHHHHHHTT CS
  Pkinase_Tyr 196 wEiftlgespypglkneevleklkeg 221
                  +E +    +p+++ +  + ++  +++
   EPX73687.1 221 YECLL-QTRPFSSTMVVNWIRSSEKE 245
                  **987.56677766666655555444 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4   0.0    0.0024       4.8      13      61 ..      29      76 ..      20      87 .. 0.82
   2 !   20.6   0.0   1.2e-07   0.00023     157     251 ..     139     231 ..     101     285 .. 0.79

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0024
  Kinase-like 13 tlvrgellkkgdrsvvfevkdqetgeplavkvfllpseaskkdlerlke 61
                 +++  ++++kg  s vf vkd   ++++a+k    +++++ k +++l  
   EPX73687.1 29 QFKLCNVVGKGSWSTVFVVKDRSSKQKFALKCINKKKHNPGK-IKQLLT 76
                 5678899************************99998888775.555544 PP

  == domain 2  score: 20.6 bits;  conditional E-value: 1.2e-07
  Kinase-like 157 aanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvlseve..........kgfaPpEllgsrggytrknktkmthkldaWqlGlviyriw 244
                    ++++kg++h ++++dn+llde+g   l +f+   r  ++ +                ++  pE+l ++  y++          d W lG+++y   
   EPX73687.1 139 LIYIHSKGILHRDIKPDNILLDEYGHCRLVDFNVASRLSQQTP---DGkgfvkgrvgtPAYMSPETLVHAISYRE---------SDWWSLGITMYECL 224
                  45789***************************99998888877...33012223333455555666555555554.........79999999999877 PP

  Kinase-like 245 clklPlt 251
                    + P+ 
   EPX73687.1 225 LQTRPFS 231
                  7777765 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3   0.0   2.9e-09   5.8e-06     323     387 ..     143     203 ..     126     211 .. 0.86

  Alignments for each domain:
  == domain 1  score: 25.3 bits;  conditional E-value: 2.9e-09
  Pkinase_fungal 323 flkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesga...rertGTleFmaievlk 387
                     +  +giLHrDi  +Nil+      +  +  L+D+++a+ ls+ ++ +g+   + r+GT+++m+ e l 
      EPX73687.1 143 H-SKGILHRDIKPDNILLD-----EYGHCRLVDFNVASRLSQ-QTPDGKgfvKGRVGTPAYMSPETLV 203
                     4.79**************9.....456778***********7.77777778899*********98876 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.9e-06    0.0037     104     170 ..     113     174 ..     102     183 .. 0.82

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.9e-06
         Kdo 104 dLedllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDldkar 170
                 dL  ++a+ ++++e++    + +++ +   +h+ g+ H+d+ + nill++ +    ++ l+D++ a 
  EPX73687.1 113 DLRYHIAQ-NRFQESVVCVWIAELASALIYIHSKGILHRDIKPDNILLDEYG----HCRLVDFNVAS 174
                 56666665.4577777777788889999999*********************....*******8665 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.85   1.7e+03      13      71 ..      44     106 ..      35     122 .. 0.67
   2 !   16.4   0.1   3.4e-06    0.0067     160     196 ..     135     173 ..      91     175 .. 0.70

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.85
                 EEEEEETT.-.-EEEEEE-TT.S-HHHHHHHHHHHHHHHHTT-B.--B-CTTBS-EEETTEEE CS
         APH  13 tylvttpa.g.ryvlrrnppa.raaeeirrevallrlLakagvp.vPevlagdtddeeigllf 71 
                 ++ v++ + + +++l+ ++++ +++ +i + + +  lL+ ++ p   + +   +dd+ i+l++
  EPX73687.1  44 VFVVKDRSsKqKFALKCINKKkHNPGKIKQLLTEVSLLRSLDHPlLCRFYSEFQDDNKIYLVS 106
                 555555554259999999999899999998888888888777641334444336666666655 PP

  == domain 2  score: 16.4 bits;  conditional E-value: 3.4e-06
                 --S....SS-EEEE-SS-SGGGEEEC..TTEEEEE---TT- CS
         APH 160 lpg....elptvllHgDlhpgNllvdpddgrvtGviDfeda 196
                 l++      ++++lH+D++p+N+l+d + g++  ++Df  a
  EPX73687.1 135 LASaliyIHSKGILHRDIKPDNILLD-EYGHC-RLVDFNVA 173
                 444444456899**************.66666.68999766 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.1    0.0026       5.2      22      97 ..      28      98 ..       8     107 .. 0.63
   2 !    8.3   0.0   0.00081       1.6     178     212 ..     132     171 ..     116     174 .. 0.75

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0026
        FTA2 22 kdiefleyLgkglhs..iVlkvkirgkeYALKlFrfleaeeleeaeedlkiprealkelasysdpfasECRAfgRLke 97
                 ++++ +++gkg  s  +V+k +  ++++ALK   +  ++    + ++ k+  + ++ l+s  +p    CR ++ +++
  EPX73687.1 28 SQFKLCNVVGKGSWStvFVVKDRSSKQKFALKCINKK-KH----NPGKIKQLLTEVSLLRSLDHP--LLCRFYSEFQD 98
                36899****999998445666677788*****54333.33....334444444444455555555..55666666655 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00081
        FTA2 178 lpkllrdlkklhklgIvvrDlkeenyi.....dgkLvDls 212
                 + +l + l  +h+ gI++rD+k++n++       +LvD+ 
  EPX73687.1 132 IAELASALIYIHSKGILHRDIKPDNILldeygHCRLVDFN 171
                 6788999****************99762222245677775 PP

>> Seadorna_VP7  Seadornavirus VP7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   3.5e-06    0.0069     152     186 ..     137     169 ..      99     180 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 3.5e-06
  Seadorna_VP7 152 kdLmdfhsestnllhGDcnpenlmcDknGylklvD 186
                   ++L  +h  s+++lh D++p+n++ D++G  +lvD
    EPX73687.1 137 SALIYIH--SKGILHRDIKPDNILLDEYGHCRLVD 169
                   5677778..899**********************9 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   1.1e-05     0.022     178     258 ..      96     178 ..      26     184 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.1e-05
  Haspin_kinase 178 fyseqqlflvlllkdkGtdLeevklkswkqalsifw..qivkiLyvaEtkfeFEHRdLhldniLvdknlnvtlidlkl.sRles 258
                    f+++++++lv  l  +G+   ++  + +++     w  + ++ L    +k    HRd++ dniL+d+ ++  l+d+ + sRl++
     EPX73687.1  96 FQDDNKIYLVSDLMLGGDLRYHIAQNRFQESVVCVWiaELASALIYIHSK-GILHRDIKPDNILLDEYGHCRLVDFNVaSRLSQ 178
                    55566666666665555555555555554444444423344444444444.456**********************97368764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (337 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       615  (0.034302); expected 358.6 (0.02)
Passed bias filter:                      507  (0.0282782); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 2408.81
//
Query:       EPX73688.1  [L=455]
Description: uridine kinase/uracil phosphoribosyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.6e-65  218.5   0.0    9.4e-65  218.0   0.0    1.2  1  PRK             Phosphoribulokinase / Uridine kinase family
    4.5e-29  101.4   0.1    6.8e-29  100.8   0.1    1.2  1  UPRTase         Uracil phosphoribosyltransferase
    8.2e-06   26.4   0.0    1.9e-05   25.2   0.0    1.6  1  AAA_18          AAA domain
    4.9e-05   23.5   0.0    0.00023   21.4   0.0    2.0  1  AAA_33          AAA domain
     0.0021   17.8   0.0     0.0041   16.9   0.0    1.5  1  Cytidylate_kin  Cytidylate kinase
     0.0023   18.4   0.1          3    8.3   0.0    2.5  2  AAA_17          AAA domain
     0.0039   17.1   0.1       0.84    9.4   0.0    2.3  2  dNK             Deoxynucleoside kinase
     0.0045   16.3   0.0     0.0087   15.4   0.0    1.4  1  Zeta_toxin      Zeta toxin
     0.0057   17.0   0.0      0.014   15.8   0.0    1.6  1  AAA_16          AAA ATPase domain
     0.0082   16.6   0.0      0.016   15.6   0.0    1.5  1  AAA             ATPase family associated with various cellula
  ------ inclusion threshold ------
      0.025   15.1   0.0      0.059   13.9   0.0    1.6  1  ABC_tran        ABC transporter
      0.034   14.0   0.0      0.063   13.1   0.0    1.3  1  CPT             Chloramphenicol phosphotransferase-like prote
      0.051   13.3   0.0      0.097   12.4   0.0    1.4  1  AAA_24          AAA domain
      0.058   13.4   0.0       0.22   11.5   0.0    2.0  2  AAA_5           AAA domain (dynein-related subfamily)
      0.073   13.3   0.0       0.17   12.2   0.0    1.6  1  AAA_22          AAA domain
      0.081   13.0   0.0       0.19   11.8   0.0    1.6  2  DUF87           Helicase HerA, central domain


Domain annotation for each model (and alignments):
>> PRK  Phosphoribulokinase / Uridine kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  218.0   0.0   8.4e-68   9.4e-65       1     197 []      24     212 ..      24     212 .. 0.98

  Alignments for each domain:
  == domain 1  score: 218.0 bits;  conditional E-value: 8.4e-68
         PRK   1 vIgvagsSGaGkttvarklekifgrekvkaaeiegdsflrldraekdleleerkrakekevsflspeandfdllyevlkelkegkkvdkpiYsheteea 99 
                 +Ig+ag+SG+Gkt+var ++k+++   ++      +++l+ld+++k l++e++++a  +e++f+spea+d++lly+vl+elk g+kvd+piYs++++++
  EPX73688.1  24 FIGIAGPSGSGKTSVARLIVKALN---LP-----NVVILSLDSFYKPLTTEQKQQAYRNEYDFDSPEAIDWGLLYNVLLELKRGRKVDIPIYSFHEHDR 114
                 6***********************...56.....667************************************************************** PP

         PRK 100 apdkeeliegadvlviEGlhalydervaelldlkiyvdisidlelarklqRDiaeRGrsleavldsil.rrkpdyvnyikpqfseadliiqrvptvdvs 197
                  p ++ +++ga+++viEG++alyderv++lld+++++ +++d++l+r+l+RDi++RGr++ +vl+++  ++kp+y+n+++ q  ++d+i++r+++++v+
  EPX73688.1 115 LP-ETSTLFGASIIVIEGIFALYDERVRSLLDVSVFLETDSDVCLSRRLNRDINYRGRDIRGVLHQYDrFVKPSYDNFVRKQSVYTDIIVPRGRDNKVA 212
                 **.9****************************************************************9**************************9985 PP

>> UPRTase  Uracil phosphoribosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.8   0.1   6.1e-32   6.8e-29       3     184 ..     257     436 ..     255     443 .. 0.96

  Alignments for each domain:
  == domain 1  score: 100.8 bits;  conditional E-value: 6.1e-32
     UPRTase   3 shpllkakltilRdastsrkdfrelvdriarllaeealsallpveevtvttplgkeysgelldeekialVpilRaGegmeealrellpearvghlglqr 101
                 ++p ++a+ til +++t+ ++++++++ri+++l+  a  + l +e++ +t   g++ +g +l + ++++V++l +G ++e al + +p++r+g++++  
  EPX73688.1 257 QTPEIEAIKTILVNKETDADNMQFYLSRIGTMLMNLAGDS-LMYEDKVITLHNGDTWKGLQLAK-ELCGVSVLGSGGTLETALCRQFPNVRLGKVLVRV 353
                 78999*****************************999887.******************88886.9********************************* PP

     UPRTase 102 eeetlepveyynkLPkkiaertvlllDpviaTGgsaaaaiqlLkergvgeekIlvlsvlaseegvkrlaeefpkvkvvtaavD 184
                 ++ t ep++ y+kLP+ ia ++v+l+ + + T+  + +a q+L + gv+ee+I+++  ++  e +k+la  fpkv++vt+ ++
  EPX73688.1 354 NQVTNEPSLQYHKLPRGIAGTNVILIASQLTTSTDVLMATQILVDFGVPEENIIIVVYVSFVESIKTLAFIFPKVTIVTGFLE 436
                 *******************************************************************************9775 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.0   1.7e-08   1.9e-05       1     114 [.      25     165 ..      25     174 .. 0.66

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 1.7e-08
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf...gvnlrdvakenglllevdpe.....aldeskrldedkldklldaleenss..................alee 73 
                 I+++G++G+GKt++a+ + k l++   ++ + d +++  + +  +++     ++d+ + +d + l ++l +l++ ++                  +l  
  EPX73688.1  25 IGIAGPSGSGKTSVARLIVKALNLpnvVILSLDSFYKPLTTEQKQQAyrneyDFDSPEAIDWGLLYNVLLELKRGRKvdipiysfhehdrlpetsTLFG 123
                 89*******************999998444444444433333333334444455555555555555555555555556666666666666666877778 PP

      AAA_18  74 gknlvidghlaeleseaakdikk..vvLtaspeelleRlekRg 114
                 ++ +vi+g+ a +  e+ + +    v+L+++ +++l R  +R+
  EPX73688.1 124 ASIIVIEGIFALYD-ERVRSLLDvsVFLETDSDVCLSRRLNRD 165
                 88889999877543.3333333345*************99997 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.0     2e-07   0.00023       5      52 ..      28      77 ..      25     186 .. 0.78

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 2e-07
      AAA_33  5 vGlpGsGKstlaerllkklg...avllssdtlrrrlfgtdqqsktdytrvl 52
                 G++GsGK+ +a+ ++k+l    +v+ls d++++ l+ +++q+  ++++  
  EPX73688.1 28 AGPSGSGKTSVARLIVKALNlpnVVILSLDSFYKPLTTEQKQQA-YRNEYD 77
                6***********************************97766654.333333 PP

>> Cytidylate_kin  Cytidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   3.7e-06    0.0041       1      40 [.      25      67 ..      25     110 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 3.7e-06
                    EEEE-STTSSHHHHHHHHHHHHT-E...EEEHHHHHHHHHHHH CS
  Cytidylate_kin  1 iaiDGPagsGKssvaralaeklglk...yldtgalYRalalaa 40
                    i i GP+gsGK svar++ + l+l    +l+  ++Y+ l+   
      EPX73688.1 25 IGIAGPSGSGKTSVARLIVKALNLPnvvILSLDSFYKPLTTEQ 67
                    7899*****************9864222677777887777655 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0    0.0026         3       2      23 ..      29      50 ..      28      55 .. 0.90
   2 !    7.5   0.1    0.0046       5.1      99     129 ..     142     173 ..     124     177 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0026
                E-TTSSHHHHHHHHHHHHTEEE CS
      AAA_17  2 GgPGsGKgtqceklvekygfth 23
                G+ GsGK+ +++ +v+ ++++ 
  EPX73688.1 29 GPSGSGKTSVARLIVKALNLPN 50
                99***************99875 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0046
                 HH..SEEEEEE--HHHHHHHHHHH..TTST-TS CS
      AAA_17  99 elkpdaiilleadpeeilerrlkd..rtrgrdd 129
                 +l  d+ ++le+d +++l+rrl++    rgrd 
  EPX73688.1 142 SL-LDVSVFLETDSDVCLSRRLNRdiNYRGRDI 173
                 44.5899****************9544699986 PP

>> dNK  Deoxynucleoside kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0     0.013        14       1      24 [.      25      48 ..      25      75 .. 0.84
   2 !    9.4   0.0   0.00075      0.84     122     177 ..     142     202 ..     127     225 .. 0.77

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.013
                EEEEESTTSSHHHHHHHHHCCSTC CS
         dNK  1 ivveGnIgaGKstlvklLskklgv 24
                i + G+ g+GK++++ l+ k+l+ 
  EPX73688.1 25 IGIAGPSGSGKTSVARLIVKALNL 48
                6799*************9999984 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00075
                 H.-SEEEEEE--HHHHHHHHHHCTTCCCT....TS-HHHHHHHHHHHHHHHTSGGCS-EEE CS
         dNK 122 k.pdlliYLkasletclerikkRgreeek....kieldYlekLhekyeewlkklnevpvlv 177
                 + +d+ ++L+++ ++cl r  +R+ ++      ++  +Y + ++ +y ++++k +  + ++
  EPX73688.1 142 SlLDVSVFLETDSDVCLSRRLNRDINYRGrdirGVLHQYDRFVKPSYDNFVRKQSVYTDII 202
                 3479*************99888888887666779999999999999999999977666444 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   7.7e-06    0.0087      18      54 ..      24      59 ..       7      80 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 7.7e-06
  Zeta_toxin 18 lillgGqpGAGKselaellkdelerqgnvvrldpDdl 54
                 i ++G +G+GK+++a+l+ ++l +  nvv l+ D++
  EPX73688.1 24 FIGIAGPSGSGKTSVARLIVKAL-NLPNVVILSLDSF 59
                6779*******************.599********97 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   1.2e-05     0.014      10      54 ..       9      52 ..       5      93 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1.2e-05
      AAA_16 10 eqLlsalervrsgrpelvllsGesGvGKsslvrellralekdggi 54
                e+L++++e+    r + + + G+sG+GK+s++r + +al+  +++
  EPX73688.1  9 ETLKNLYEPPW-RRIRFIGIAGPSGSGKTSVARLIVKALNLPNVV 52
                56777777433.2448899****************9999877544 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   1.4e-05     0.016       3      35 ..      27      60 ..      25      76 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 1.4e-05
                EESSTTSSHHHHHHHHHHHHT.HEEEEEETTTCS CS
         AAA  3 lyGppGtGKTllakavakelg.vefleisgsell 35
                + Gp G GKT++a+ ++k l+  +++ +s+ ++ 
  EPX73688.1 27 IAGPSGSGKTSVARLIVKALNlPNVVILSLDSFY 60
                68******************94445666666665 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   5.3e-05     0.059      13      36 ..      24      47 ..      20      82 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 5.3e-05
                EEEEEESTTSSHHHHHHHHTTSS- CS
                xxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 13 kvaivGenGaGKStLlkllagllk 36
                 ++i G++G+GK+++++l+ + l+
  EPX73688.1 24 FIGIAGPSGSGKTSVARLIVKALN 47
                589****************98765 PP

>> CPT  Chloramphenicol phosphotransferase-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   5.7e-05     0.063       6      60 ..      27      82 ..      23      98 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 5.7e-05
                EEE-TTSSHHHHHHHHHHHSSS-EE.EEEHHHHHHHS-GGGGTSTTSEEEETTSEE CS
         CPT  6 LnGgsssGKsslaralqevldepwl.hlgvDafvealppkrqdeadglefetelee 60
                + G s sGK+s+ar + + l+ p +  l +D+f + l ++++++a   e++ + +e
  EPX73688.1 27 IAGPSGSGKTSVARLIVKALNLPNVvILSLDSFYKPLTTEQKQQAYRNEYDFDSPE 82
                6799*****************997615799*******9999998877777766664 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   8.6e-05     0.097       5      33 ..      25      58 ..      23      87 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 8.6e-05
      AAA_24  5 iliyGpsgiGKTtlakel.....gpkplfidtek 33
                i i Gpsg+GKT++a+ +      p+++++ ++ 
  EPX73688.1 25 IGIAGPSGSGKTSVARLIvkalnLPNVVILSLDS 58
                679*************999999999999998885 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00019      0.22       5      30 ..      28      53 ..      25      80 .. 0.84
   2 ?   -2.3   0.0       3.6   4.1e+03      65      85 ..     123     143 ..      88     146 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00019
                E--SSSSHHHHHHHGGGGBS--EEEE CS
       AAA_5  5 vGppGtgKselaerlaaalnreveyv 30
                 Gp+G+gK+++a+ + +aln + +++
  EPX73688.1 28 AGPSGSGKTSVARLIVKALNLPNVVI 53
                6******************7665444 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 3.6
                 G-SEEEEESGGG--HHHHHHH CS
       AAA_5  65 egeilvlDEveraesevlnsL 85 
                  ++i+v+++++ + +e + sL
  EPX73688.1 123 GASIIVIEGIFALYDERVRSL 143
                 578999999997776666665 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   0.00015      0.17       7      30 ..      24      47 ..      20     112 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00015
      AAA_22  7 ilvvtGesGtGKTtllrrlleqld 30
                ++ + G+sG+GKT ++r +++ l+
  EPX73688.1 24 FIGIAGPSGSGKTSVARLIVKALN 47
                67799*************999884 PP

>> DUF87  Helicase HerA, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00017      0.19      26      59 ..      25      57 ..      23     113 .. 0.89
   2 ?   -3.0   0.0       5.6   6.3e+03     169     205 ..     177     213 ..     145     242 .. 0.59

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00017
       DUF87 26 lAilgsTGsGKSntvavLleellekkgatililD 59
                ++i g +GsGK+  ++++++ l   +++ il lD
  EPX73688.1 25 IGIAGPSGSGKTSVARLIVKALN-LPNVVILSLD 57
                6899*******************.9999998777 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 5.6
       DUF87 169 ldkledllrkggsfsnsstdliallleklekegkiti 205
                 l++ +++ +  ++    ++++++++    ++++k++i
  EPX73688.1 177 LHQYDRFVKPSYDNFVRKQSVYTDIIVPRGRDNKVAI 213
                 4444444444444434444444444344444444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (455 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       501  (0.0279436); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                       100  (0.00557756); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 3273.67
//
Query:       EPX73689.1  [L=1055]
Description: 3-hydroxy-3-methylglutaryl-CoA reductase Hmg1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   3.9e-139  463.7   1.1   5.4e-139  463.3   1.1    1.2  1  HMG-CoA_red     Hydroxymethylglutaryl-coenzyme A reductase
    5.8e-11   42.5   8.9    1.9e-10   40.8   8.9    1.9  1  Sterol-sensing  Sterol-sensing domain of SREBP cleavage-activ
    0.00076   19.4   0.3     0.0016   18.3   0.3    1.5  1  HPIH            N-terminal domain with HPIH motif


Domain annotation for each model (and alignments):
>> HMG-CoA_red  Hydroxymethylglutaryl-coenzyme A reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  463.3   1.1  9.1e-143  5.4e-139       2     367 .]     648    1027 ..     647    1027 .. 0.97

  Alignments for each domain:
  == domain 1  score: 463.3 bits;  conditional E-value: 9.1e-143
                   HHHHHHHHHH...S-HHHHHHHTT----.HHHHHHHSSS---------EEEEEEEETTEEEEEEE---STTHHHHHHHHHHHHHHTT-B.EEEE-- CS
  HMG-CoA_red    2 veeRrkllee...lteeeleelkeesld.eevadkmiEnviGyvqlPlGvagpllingkeylvPmAteEgslvAsasrgakainesgGvkttvlkd 93  
                   v +Rr+++++   +++ e ++ + +++d ++v+++++EnviGy++lPlGvagp+ i+gk y+vPmAt+Eg+lvAs+ rg+kain++gG+ t++++d
   EPX73689.1  648 VVIRRAAVSRssrTQTLEASNCPVYHYDySRVLNACCENVIGYIPLPLGVAGPVIIDGKPYYVPMATTEGALVASTMRGCKAINAGGGAVTVLTRD 743 
                   668999998854344445555799************************************************************************ PP

                   --EEEEEEEE.--S-HHHHHHHHHTHHHHHHHHHHCSHHCCT-EEEEEEEEE-SSEEEEEEEEE-TTC--HHHHHHHHHHHHHHHHHH..HTSEEE CS
  HMG-CoA_red   94 gmtraqvvllesvedaaelkkwiekkeeleelanaaestsrggglkdievvlagrlvvlrlkvdtgDAmGaNmvnkateaaaelieee..fgeeel 187 
                   +m r++++ ++++++a ++k w+++ e  e +++a++stsr+++l++i+++lag+ +++r+ ++tgDAmG+Nm++k++e+a+ ++++e  f+++++
   EPX73689.1  744 EMSRGPCISFPNLTRAGRAKLWLDSPEGTEVITKAFNSTSRFARLQRIKTALAGTRLFIRFCTSTGDAMGMNMISKGVEHALTVMSSEagFEDMSV 839 
                   *************************************************************************************98867889*** PP

                   EEEE-S--GGGEEEEEEEEEHHHH..-SSTTHHHHHHHHHHHHHHHHHH-HHHH....HHHHHHH........HHHHHHHHHHTT--HHHHHHHHH CS
  HMG-CoA_red  188 lsilsNlctdkkasainaiegrgksvvaeatigeevvekilkasaealvdlnra.n.igtankGi.ggfnahaaNgiaAvflAtGqDlaaveessh 280 
                   +s+++N+ctdkk++ain+i+grgksv+aea+i+ e v++ilk+++++lv+ln++ n ig+a++G+ ggfnaha N+++A+flAtGqD+a++ ess+
   EPX73689.1  840 ISLSGNYCTDKKPAAINWIDGRGKSVIAEAIIPGEAVKSILKTTVDDLVKLNVDkNlIGSAMAGSvGGFNAHAGNIVTAIFLATGQDPAQNIESSN 935 
                   ************************************************************************************************ PP

                   HHTTSEEETTTEEEEEEEEE.----SBSHHHHH-HHHHHHHHTT---HH.........HHHHHHHHHHHHHHHHHHHHHT-----HHHHHHHH CS
  HMG-CoA_red  281 aiaaleevedgdlygsvtlPsleVGtvGGgtklppqaellkllgvkgak......nakeLaeiiaavgLAqelsalrALaaeglqkgHmklhr 367 
                   +i+++++v dg+l  sv++Ps+eVGt+GGgt l+pq+++l+llgvkga+      na++La++iaa ++A+els+++ALa+++l+k+H  l+r
   EPX73689.1  936 CITLMDNV-DGNLQLSVSMPSIEVGTIGGGTVLEPQQAMLDLLGVKGAHltspgdNARQLAKVIAAGVMAGELSLCSALATGHLVKSHIGLNR 1027
                   ********.777****************************************************************************99987 PP

>> Sterol-sensing  Sterol-sensing domain of SREBP cleavage-activation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.8   8.9   3.1e-14   1.9e-10       3     138 ..     232     370 ..     230     384 .. 0.88

  Alignments for each domain:
  == domain 1  score: 40.8 bits;  conditional E-value: 3.1e-14
                     HHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHH.HHHHHHHHHHHCHHCCHHCHHHHHHHHTTTCH....HHHHHHHHHHHCCCCHHCCCHH CS
  Sterol-sensing   3 kskfgLglagviivllsvasslgllaylgltltlii.levlPflvlavgvdnifvlvkavqrtsrslde....seriaealgevgpsilltslte 92 
                      s+f+L ++  + +l+sv  +++l+ + g++++l++ +e +Pfl+ +v +d +  l++av +   s+d     +e +aea ++++p il      
      EPX73689.1 232 GSRFWLFFSVCMSTLFSVQFAMSLIRFSGVRISLVSlIESMPFLLNVVALDKSVNLTRAVMSRCASSDSrsatHEDVAEACRDAAPPILRHFSFG 326
                     69********************************974699*******************98766555555677********************** PP

                     HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH CS
  Sterol-sensing  93 llalllgaltdvpavqeFclfaavavlvdFllqitfFvavLsldir 138
                     +++l++ +  +  ++++F lfaav  + d +l  tfFv++L+l+++
      EPX73689.1 327 IVVLAIFSYCN-FGLKQFFLFAAVM-VYDLVLLFTFFVSILTLNLE 370
                     ***99875555.589*******985.68***************976 PP

>> HPIH  N-terminal domain with HPIH motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.3   2.6e-07    0.0016      10      39 ..       3      32 ..       1      38 [. 0.89

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 2.6e-07
        HPIH 10 skfaakhPIhtIvvvallasttYlsvlees 39
                 + aa++PI +I vv +l s++Y s le+ 
  EPX73689.1  3 YRIAARYPIQVIAVVCILVSMAYYSFLETL 32
                589***********************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1055 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       795  (0.0443416); expected 358.6 (0.02)
Passed bias filter:                      490  (0.02733); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.76u 0.27s 00:00:01.03 Elapsed: 00:00:00.43
# Mc/sec: 7437.58
//
Query:       EPX73690.1  [L=1786]
Description: nuclear pore complex associated protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.4e-24   85.3  18.3    3.4e-24   85.3  18.3   18.5 19  TPR_MLP1_2    TPR/MLP1/MLP2-like protein
     0.0028   17.8   4.1     0.0028   17.8   4.1   21.9 26  HALZ          Homeobox associated leucine zipper
  ------ inclusion threshold ------
        0.4   10.9   6.0       0.39   11.0   0.4    2.8  2  Ependymin     Ependymin
        1.6    8.6   7.8       0.53   10.1   1.4    3.6  3  Imm27         Immunity protein 27


Domain annotation for each model (and alignments):
>> TPR_MLP1_2  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2  14.5      0.43   1.9e+03       6     101 ..      62     157 ..      57     165 .. 0.89
   2 ?   -6.2  21.1         4   1.8e+04       2     128 ..     121     254 ..     120     258 .. 0.84
   3 ?    3.6  19.2     0.015        65       7     118 ..     249     364 ..     225     374 .. 0.60
   4 ?   -0.8  11.7      0.32   1.4e+03      13     101 ..     403     491 ..     392     507 .. 0.76
   5 ?   -2.0  12.3      0.79   3.6e+03       5     124 ..     444     563 ..     442     568 .. 0.94
   6 ?   -1.5   7.4      0.56   2.5e+03      29      86 ..     552     609 ..     527     616 .. 0.56
   7 ?   -0.1   2.5       0.2   8.8e+02      61     119 ..     644     697 ..     625     701 .. 0.49
   8 !    4.8   6.9    0.0064        29      57     125 ..     663     731 ..     659     735 .. 0.95
   9 ?    4.0  15.1     0.011        50       7     127 ..     701     810 ..     698     812 .. 0.80
  10 ?    3.3  11.1     0.018        80      15     119 ..     751     855 ..     738     858 .. 0.53
  11 !    5.7   0.7    0.0032        14       2      47 ..     865     910 ..     864     915 .. 0.86
  12 !   12.4   7.6   2.7e-05      0.12      53     116 ..     930     993 ..     926    1002 .. 0.94
  13 !   85.3  18.3   7.7e-28   3.4e-24       1     129 []    1026    1154 ..    1026    1154 .. 0.98
  14 ?    2.3   0.5     0.036   1.6e+02      72     124 ..    1195    1248 ..    1181    1253 .. 0.74
  15 ?    2.6   0.6     0.029   1.3e+02      59     103 ..    1281    1325 ..    1214    1333 .. 0.54
  16 ?    3.5  12.3     0.015        69      10     111 ..    1295    1389 ..    1272    1394 .. 0.50
  17 !    6.7  18.0    0.0016         7       5     129 .]    1322    1443 ..    1319    1443 .. 0.81
  18 ?   -1.0  31.1      0.39   1.8e+03       4     116 ..    1413    1527 ..    1410    1529 .. 0.87
  19 ?    0.1   9.0      0.17   7.8e+02      56     107 ..    1582    1635 ..    1570    1645 .. 0.68

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.43
  TPR_MLP1_2   6 leeeikslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeel 101
                 +e++   l+++  e+e++l + + d e+ ++++   +++ ++   +  ++ k+  al++e +e+k+e + + +e+ +++++l ++ + ++e+ + +
  EPX73690.1  62 FEQQSRVLEKKLLESEKQLDASKFDNESLRKSLVLSEENSKKNYDLYQNAQKDAGALKAERDEAKSEFERIYKENSRLRESLVQNSKDLQEKSTVI 157
                 67777788899999999********************************************************************99999987665 PP

  == domain 2  score: -6.2 bits;  conditional E-value: 4
  TPR_MLP1_2   2 elksleeeikslkeekeeaeaklqklqedlekqaeiakeaqq...kYerelvkhaedvkelqalreel....nelkaeiaelkaeaesakaeleesees 93 
                 e +++++e +++ +e++++++ l +  +dl++++      +     Y r +++ +   +++q+ ++ +    ++l++  + l++++  +++ +e   ++
  EPX73690.1 121 ERDEAKSEFERIYKENSRLRESLVQNSKDLQEKSTVIDGYKSqllMYNRKVLEVEHLQQQVQSSKSSYdfelQKLNKNNTILENNNTWLNQVVEDVNNK 219
                 67899999***********************999876555442227********************886666788888888888888888888888888 PP

  TPR_MLP1_2  94 weeqkeelekelselekriedlneqNklLhdQlEs 128
                 + +  +    e+s+l+++++d n  N+lL ++ ++
  EPX73690.1 220 LLKLHQVTSVEKSQLNSQLTDANLNNDLLRSKVDA 254
                 8888888888*******************998876 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.015
  TPR_MLP1_2   7 eeeikslkeekeeaeaklqklqedlekqaeiakea....qqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeel 101
                 ++++++l+++ +e + k ++  ++l + ++++++a    q++ ++e ++    +++ + l + +++l++  +el++ + +a+++le++ +  e+  +++
  EPX73690.1 249 RSKVDALTKQCAEIQLKHETCLNELSEVKKQYENAvfsfQKDLASENQLTDLWIDKYKMLQKHSEHLQNANSELNTLLRDAQESLENQSSVFEKNVSSY 347
                 455555555555555555555555555555555553333444444444444445566666666666666666666666666666666666666666666 PP

  TPR_MLP1_2 102 ekelselekriedlneq 118
                 ++ l+ l+k i  l++q
  EPX73690.1 348 QSTLEFLKKEISSLESQ 364
                 66666666666666665 PP

  == domain 4  score: -0.8 bits;  conditional E-value: 0.32
  TPR_MLP1_2  13 lkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeel 101
                  k++ e+ ++++  lq+ l++  ++++  +   +++     e  ke++a+ +++++  +  ++++++ ++++ +l+ + ++ +  ++++
  EPX73690.1 403 FKQKYEQCKQQVDRLQRSLNETMSEVNMQHPLIKQQFARFDEKQKEIAAISQQYQKSLSHFKKIQSDYKTVEIQLKDKSKENKHYEQQI 491
                 56777788888888888888888888888888888888888888888888888888888888888888888888888777665555543 PP

  == domain 5  score: -2.0 bits;  conditional E-value: 0.79
  TPR_MLP1_2   5 sleeeikslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeelek 103
                 + ++ei++++++ +++ ++++k+q+d ++ + ++k+  +  ++  ++  + + ++q l  e++   + +    +e++  ++ +e+s  s e+  ++l +
  EPX73690.1 444 EKQKEIAAISQQYQKSLSHFKKIQSDYKTVEIQLKDKSKENKHYEQQIGDLTHQVQFLLHEIDLRDSGMMFTAQERQVFRSLVEKSLDSAESDTNQLIS 542
                 5689999************************999999999999999999************************************************** PP

  TPR_MLP1_2 104 elselekriedlneqNklLhd 124
                 +   + k i +l++qN+ L++
  EPX73690.1 543 DRLVTFKNIAELQQQNQKLLS 563
                 ****************99986 PP

  == domain 6  score: -1.5 bits;  conditional E-value: 0.56
  TPR_MLP1_2  29 edlekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesakae 86 
                  +l++q + +    ++ ++el kh++ +++ +  ++ l +++  i el++++e  +++
  EPX73690.1 552 AELQQQNQKLLSVIRDLAQELEKHESVSDASNVQNDTLLNANRIIDELTQQVEFMNEQ 609
                 2344444444444444444555555555555555555555555555555555555555 PP

  == domain 7  score: -0.1 bits;  conditional E-value: 0.2
  TPR_MLP1_2  61 alreelnelkaeiaelkaeaesakaeleeseesweeqkeelekelselekriedlneqN 119
                 +l+e+l    ++++++  +++  ++e+e+ ++  +e++ +  +++++le+   dl++ N
  EPX73690.1 644 KLKEKL---GNQRSSI--QLDLITEEFETFRSIANEKERKVLEKVESLETANHDLQNLN 697
                 344443...3322222..23344445555555555555555555555555555555555 PP

  == domain 8  score: 4.8 bits;  conditional E-value: 0.0064
  TPR_MLP1_2  57 kelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeelekelselekriedlneqNklLhdQ 125
                 +e +++r+ +ne + ++ e  +++e+a+++l++  ++++   ++  +e ++ e +++  ++ N++Lh++
  EPX73690.1 663 EEFETFRSIANEKERKVLEKVESLETANHDLQNLNSAIKVDLTKVLEECNNYELKLKTSEKENSVLHEK 731
                 6778999999*********************************************************85 PP

  == domain 9  score: 4.0 bits;  conditional E-value: 0.011
  TPR_MLP1_2   7 eeeikslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeelekel 105
                 + ++++++ee +++e kl++ +++    +e ++  q++Y + l++  + v +l+ + +++++++ ++++l            ++++ w++ +++l  e 
  EPX73690.1 701 KVDLTKVLEECNNYELKLKTSEKENSVLHEKYRSLQEQYYNNLQEYQTIVGQLSVYTKQVETYRYDLENLH-----------KEKNLWNSVESKLSAEC 788
                 56778889999999999999999999999999999999999998888888888888877777777776554...........56778888888888888 PP

  TPR_MLP1_2 106 selekriedlneqNklLhdQlE 127
                 s+l++ +  +++ N+ L  Ql+
  EPX73690.1 789 SQLNASLLSVKQENNQLRAQLQ 810
                 8888888888888888888886 PP

  == domain 10  score: 3.3 bits;  conditional E-value: 0.018
  TPR_MLP1_2  15 eekeeaeaklqklqedlekqaeiakeaqqkYerel.vkhaedvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeelekelselekri 112
                  + + +++++++++ dle+ +++ +  +   e+ l  + ++   +l ++++e n+l+a+++  ++e +   + l++  ++ +    +   ++se +  i
  EPX73690.1 751 GQLSVYTKQVETYRYDLENLHKEKNLWNS-VESKLsAECSQLNASLLSVKQENNQLRAQLQVHEQEHDCIVNLLNNRLSECSVDLRNANAKISEYTDDI 848
                 34455555555555555555554333333.222220233444445566666666666666666666666666666666666666666666666666666 PP

  TPR_MLP1_2 113 edlneqN 119
                 ++++ qN
  EPX73690.1 849 KNITMQN 855
                 6666666 PP

  == domain 11  score: 5.7 bits;  conditional E-value: 0.0032
  TPR_MLP1_2   2 elksleeeikslkeekeeaeaklqklqedlekqaeiakeaqqkYer 47 
                 +l+++ ++i++lk+e +++ ++ ++l ++ ++ ++++k  q++Y +
  EPX73690.1 865 QLNTMGSKISELKQELTSQVTRCTSLVNENQELKNSLKFTQERYMN 910
                 5778889999999999999999999999999999999999999975 PP

  == domain 12  score: 12.4 bits;  conditional E-value: 2.7e-05
  TPR_MLP1_2  53 aedvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeelekelselekriedln 116
                 ++ +k+l a++e+l++l +e+++l+++  + +++le   e  ++ k  +e+el+e e +i++l 
  EPX73690.1 930 SNLIKDLDAAKEKLQNLGDEYQKLQQKCLASEKTLELMNETHDQFKHIMESELQEREDKIKNLY 993
                 7789*********************************************************986 PP

  == domain 13  score: 85.3 bits;  conditional E-value: 7.7e-28
  TPR_MLP1_2    1 kelksleeeikslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesakaeleeseesweeq 97  
                  ke+++l++  ++ k   +e e+++++l++dlekq +++kea+ ++e+e+++h +++++l ++r++++e+ka + elk++ e+ ++ ++ se +w++q
  EPX73690.1 1026 KEKDELTNFNEENKLMHDETEKTISHLKSDLEKQIQLTKEAHSNFETEIINHGSTTQKLYDMRSKYEEVKANYLELKSKSEEWTTMHADSEDNWKKQ 1122
                  5899999999999999********************************************************************************* PP

  TPR_MLP1_2   98 keelekelselekriedlneqNklLhdQlEsl 129 
                  k++le+el++l++++  l++qN++Lh+Q++s+
  EPX73690.1 1123 KDNLETELASLKEQLSGLESQNRILHSQFDSV 1154
                  *****************************985 PP

  == domain 14  score: 2.3 bits;  conditional E-value: 0.036
  TPR_MLP1_2   72 eiaelkaeaes.akaeleeseesweeqkeelekelselekriedlneqNklLhd 124 
                  ei+  k e+ s  ++ l+++ +s++ + ++l  e++ l+   +  n+qN+ L++
  EPX73690.1 1195 EITANKHELASlNNKRLSQQVKSLQGTIDSLSFEIARLRGSADSGNSQNQALLS 1248
                  344444444440457799999999999999999999999999999999999975 PP

  == domain 15  score: 2.6 bits;  conditional E-value: 0.029
  TPR_MLP1_2   59 lqalreelnelkaeiaelkaeaesakaeleeseesweeqkeelek 103 
                  l ++ +++++l+ ei++l+ e+++ +++++   e  e+ k+++++
  EPX73690.1 1281 LIDVESKFDSLNIEINDLRIELDAKNESIKLLHEDNERWKTRFQS 1325
                  334555556666666666666666665555555555555555554 PP

  == domain 16  score: 3.5 bits;  conditional E-value: 0.015
  TPR_MLP1_2   10 ikslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeelekels 106 
                  i++l+ e ++ ++ ++ l ed e  + + +    +Yer       d  + ++l++++++l ae +el+++ +++k+e e+ +   +eq ++l++e++
  EPX73690.1 1295 INDLRIELDAKNESIKLLHEDNERWKTRFQSVLTRYER------MDPSQYEELKTKFDHLHAEKQELESAFQKLKEEDEKHKGD-SEQISALKTEVE 1384
                  44444444444444444444444444444444444444......2444445555555555555555555555555443333333.334444455544 PP

  TPR_MLP1_2  107 elekr 111 
                  +l+++
  EPX73690.1 1385 QLNAK 1389
                  44443 PP

  == domain 17  score: 6.7 bits;  conditional E-value: 0.0016
  TPR_MLP1_2    5 sleeeikslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeel 101 
                  ++++ +++++  + ++ ++l++  + l +++++++ a qk ++e  kh+ d+++++al++e+++l+a+  +l +   + ++  e   +s + + ++l
  EPX73690.1 1322 RFQSVLTRYERMDPSQYEELKTKFDHLHAEKQELESAFQKLKEEDEKHKGDSEQISALKTEVEQLNAKNVKLAS---AWNERYESLINSSKARFSQL 1415
                  5667777777777777788888889999***************************************9999865...55566666666677777777 PP

  TPR_MLP1_2  102 ekelselekriedlneqNklLhdQlEsl 129 
                  ++e++   k +   ++ Nk L + lE++
  EPX73690.1 1416 RQEITTRDKELGSQKDENKNLSKELENM 1443
                  7777777777777788888888888875 PP

  == domain 18  score: -1.0 bits;  conditional E-value: 0.39
  TPR_MLP1_2    4 ksleeeikslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreel.nelkaeiaelkaeaesakaeleeseesweeqke 99  
                  ++l++ei++ ++e  +++++ ++l ++le+++e+ak+     e+  +  +++ ++l++lr+ l +el a  ++l++  ++ ++el+ + +++ee ++
  EPX73690.1 1413 SQLRQEITTRDKELGSQKDENKNLSKELENMREEAKTNSV--EEKETVSKDEFQQLEQLRDSLeKELSAAKENLESLTKQKETELSSNSSHLEELEK 1507
                  6899999****************************99888..77777778999*********95578888888999999999999999999999999 PP

  TPR_MLP1_2  100 ele...kelselekriedln 116 
                  +le   +e ++l ++i++l+
  EPX73690.1 1508 QLElkmQENEKLSQKIDELS 1527
                  99966677888889999987 PP

  == domain 19  score: 0.1 bits;  conditional E-value: 0.17
  TPR_MLP1_2   56 vkelqalreelnelkaeiaelkaeaesakaelees.eeswee.qkeelekelse 107 
                   +e ++l +elne k++i++lk++++s+k+e +++ e ++e+  ke+lek l+e
  EPX73690.1 1582 FEERENLQKELNESKTTIETLKSDLQSLKNEPNNKsEPELENiVKERLEKALQE 1635
                  566677888888888888888888888887754430334443256666666665 PP

>> HALZ  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.4    0.0012       5.3       5      33 ..     113     141 ..     112     145 .. 0.89
   2 ?   -0.9   1.4      0.44     2e+03       8      40 ..     246     278 ..     245     281 .. 0.78
   3 ?   -2.4   1.2       1.3     6e+03      21      42 ..     305     326 ..     303     327 .. 0.77
   4 ?   -1.3   0.3       0.6   2.7e+03      22      35 ..     352     365 ..     347     372 .. 0.67
   5 ?   -2.7   0.2       1.7   7.4e+03      11      26 ..     404     419 ..     403     423 .. 0.61
   6 ?    1.8   1.2     0.065   2.9e+02      23      42 ..     553     572 ..     548     573 .. 0.86
   7 ?   -3.3   1.4       2.5   1.1e+04      19      42 ..     625     649 ..     620     650 .. 0.60
   8 ?   -2.4   0.8       1.4   6.1e+03      26      41 ..     723     738 ..     721     746 .. 0.57
   9 !    6.6   1.4    0.0021       9.2      10      36 ..     784     810 ..     782     811 .. 0.91
  10 ?    1.3   0.3      0.09     4e+02      20      34 ..     886     900 ..     876     902 .. 0.83
  11 ?   -3.4   0.9       2.8   1.2e+04      20      33 ..     942     955 ..     931     957 .. 0.49
  12 ?   -4.1   0.1         4   1.8e+04      30      40 ..     991    1001 ..     990    1002 .. 0.80
  13 ?    3.3   0.2     0.022        98      17      32 ..    1017    1032 ..    1015    1033 .. 0.90
  14 ?   -1.4   0.2      0.64   2.9e+03       7      19 ..    1091    1103 ..    1087    1107 .. 0.52
  15 !    8.3   1.5   0.00059       2.6      22      42 ..    1117    1137 ..    1113    1138 .. 0.91
  16 ?    1.8   0.0     0.066     3e+02       8      26 ..    1145    1163 ..    1140    1167 .. 0.79
  17 ?   -0.8   0.2      0.42   1.9e+03      28      40 ..    1208    1220 ..    1200    1222 .. 0.84
  18 ?   -4.2   0.3         4   1.8e+04      20      29 ..    1259    1268 ..    1256    1268 .. 0.82
  19 ?   -0.3   0.1      0.29   1.3e+03      19      35 ..    1286    1302 ..    1283    1304 .. 0.81
  20 !   17.8   4.1   6.3e-07    0.0028      12      41 ..    1336    1365 ..    1336    1367 .. 0.95
  21 ?    0.6   0.1      0.16     7e+02      30      41 ..    1378    1389 ..    1375    1395 .. 0.56
  22 ?    0.6   1.5      0.16     7e+02      25      41 ..    1430    1446 ..    1426    1448 .. 0.89
  23 ?   -3.3   4.0       2.6   1.2e+04      14      36 ..    1463    1485 ..    1460    1493 .. 0.46
  24 ?   -2.0   4.5      0.98   4.4e+03      26      42 ..    1514    1530 ..    1501    1531 .. 0.83
  25 ?   -1.0   0.3      0.47   2.1e+03      26      37 ..    1583    1594 ..    1581    1598 .. 0.89
  26 ?    0.6   0.1      0.15   6.8e+02      15      27 ..    1600    1612 ..    1596    1615 .. 0.66

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0012
        HALZ   5 rDYdvLKasYdaLksdydsLkkenekLka 33 
                 +D ++LKa  d  ks+++ + ken +L+ 
  EPX73690.1 113 KDAGALKAERDEAKSEFERIYKENSRLRE 141
                 56689**********************97 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.44
        HALZ   8 dvLKasYdaLksdydsLkkenekLkaelqeLke 40 
                 d L+++ daL+ ++  ++   e+ ++el e k+
  EPX73690.1 246 DLLRSKVDALTKQCAEIQLKHETCLNELSEVKK 278
                 578899999998888888888888888887776 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 1.3
        HALZ  21 ydsLkkenekLkaelqeLkekl 42 
                 y  L+k+ e L++   eL+ +l
  EPX73690.1 305 YKMLQKHSEHLQNANSELNTLL 326
                 7789999999998877777665 PP

  == domain 4  score: -1.3 bits;  conditional E-value: 0.6
        HALZ  22 dsLkkenekLkael 35 
                 + Lkke  +L+++l
  EPX73690.1 352 EFLKKEISSLESQL 365
                 55666666666666 PP

  == domain 5  score: -2.7 bits;  conditional E-value: 1.7
        HALZ  11 KasYdaLksdydsLkk 26 
                 K++Y++ k ++d L++
  EPX73690.1 404 KQKYEQCKQQVDRLQR 419
                 5566666666666654 PP

  == domain 6  score: 1.8 bits;  conditional E-value: 0.065
        HALZ  23 sLkkenekLkaelqeLkekl 42 
                  L+++n+kL++ ++ L + l
  EPX73690.1 553 ELQQQNQKLLSVIRDLAQEL 572
                 69*********999998766 PP

  == domain 7  score: -3.3 bits;  conditional E-value: 2.5
        HALZ  19 sdydsLkkenekL.kaelqeLkekl 42 
                  ++d Lk   ++L +++ ++Lkekl
  EPX73690.1 625 QENDLLKLNDDSLdLNKAMKLKEKL 649
                 4556666666666346677777776 PP

  == domain 8  score: -2.4 bits;  conditional E-value: 1.4
        HALZ  26 kenekLkaelqeLkek 41 
                 ken  L+ + ++L e+
  EPX73690.1 723 KENSVLHEKYRSLQEQ 738
                 4555555555554443 PP

  == domain 9  score: 6.6 bits;  conditional E-value: 0.0021
        HALZ  10 LKasYdaLksdydsLkkenekLkaelq 36 
                 L a + +L ++  s+k+en++L+a+lq
  EPX73690.1 784 LSAECSQLNASLLSVKQENNQLRAQLQ 810
                 67889999999**************98 PP

  == domain 10  score: 1.3 bits;  conditional E-value: 0.09
        HALZ  20 dydsLkkenekLkae 34 
                 ++ sL +en++Lk+ 
  EPX73690.1 886 RCTSLVNENQELKNS 900
                 678999999999975 PP

  == domain 11  score: -3.4 bits;  conditional E-value: 2.8
        HALZ  20 dydsLkkenekLka 33 
                 + ++L +e +kL++
  EPX73690.1 942 KLQNLGDEYQKLQQ 955
                 33344444444443 PP

  == domain 12  score: -4.1 bits;  conditional E-value: 4
        HALZ   30 kLkaelqeLke 40  
                  +L ae+ +Lk+
  EPX73690.1  991 NLYAEVSQLKQ 1001
                  68899999985 PP

  == domain 13  score: 3.3 bits;  conditional E-value: 0.022
        HALZ   17 LksdydsLkkenekLk 32  
                  L+++ ++L ke+++L 
  EPX73690.1 1017 LTAQIENLTKEKDELT 1032
                  999**********996 PP

  == domain 14  score: -1.4 bits;  conditional E-value: 0.64
        HALZ    7 YdvLKasYdaLks 19  
                  Y+  Ka+Y  Lks
  EPX73690.1 1091 YEEVKANYLELKS 1103
                  4444555555554 PP

  == domain 15  score: 8.3 bits;  conditional E-value: 0.00059
        HALZ   22 dsLkkenekLkaelqeLkekl 42  
                  d+ kk++++L++el++Lke+l
  EPX73690.1 1117 DNWKKQKDNLETELASLKEQL 1137
                  7789***************98 PP

  == domain 16  score: 1.8 bits;  conditional E-value: 0.066
        HALZ    8 dvLKasYdaLksdydsLkk 26  
                  ++L +++d+  ++++ L++
  EPX73690.1 1145 RILHSQFDSVSHQVEFLQN 1163
                  7899999999999998875 PP

  == domain 17  score: -0.8 bits;  conditional E-value: 0.42
        HALZ   28 nekLkaelqeLke 40  
                  n++L +++++L +
  EPX73690.1 1208 NKRLSQQVKSLQG 1220
                  999*****99975 PP

  == domain 18  score: -4.2 bits;  conditional E-value: 4
        HALZ   20 dydsLkkene 29  
                  +++ L+k+ne
  EPX73690.1 1259 SNELLRKDNE 1268
                  689999*997 PP

  == domain 19  score: -0.3 bits;  conditional E-value: 0.29
        HALZ   19 sdydsLkkenekLkael 35  
                  s++dsL+ e + L++el
  EPX73690.1 1286 SKFDSLNIEINDLRIEL 1302
                  78999999999999988 PP

  == domain 20  score: 17.8 bits;  conditional E-value: 6.3e-07
        HALZ   12 asYdaLksdydsLkkenekLkaelqeLkek 41  
                  ++Y+ Lk+++d L++e+++L++  q+Lke 
  EPX73690.1 1336 SQYEELKTKFDHLHAEKQELESAFQKLKEE 1365
                  59**************************95 PP

  == domain 21  score: 0.6 bits;  conditional E-value: 0.16
        HALZ   30 kLkaelqeLkek 41  
                  +Lk+e+++L++k
  EPX73690.1 1378 ALKTEVEQLNAK 1389
                  455555555554 PP

  == domain 22  score: 0.6 bits;  conditional E-value: 0.16
        HALZ   25 kkenekLkaelqeLkek 41  
                  k+en++L +el+ ++e 
  EPX73690.1 1430 KDENKNLSKELENMREE 1446
                  79**********99985 PP

  == domain 23  score: -3.3 bits;  conditional E-value: 2.6
        HALZ   14 YdaLksdydsLkkenekLkaelq 36  
                  + +L    dsL+ke  + k  l+
  EPX73690.1 1463 FQQLEQLRDSLEKELSAAKENLE 1485
                  44444444555555444444444 PP

  == domain 24  score: -2.0 bits;  conditional E-value: 0.98
        HALZ   26 kenekLkaelqeLkekl 42  
                  +enekL +++ eL+  l
  EPX73690.1 1514 QENEKLSQKIDELSREL 1530
                  8************8765 PP

  == domain 25  score: -1.0 bits;  conditional E-value: 0.47
        HALZ   26 kenekLkaelqe 37  
                  +e+e+L++el+e
  EPX73690.1 1583 EERENLQKELNE 1594
                  799******986 PP

  == domain 26  score: 0.6 bits;  conditional E-value: 0.15
        HALZ   15 daLksdydsLkke 27  
                  + Lksd +sLk+e
  EPX73690.1 1600 ETLKSDLQSLKNE 1612
                  5566666666665 PP

>> Ependymin  Ependymin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.8     0.081   3.7e+02      16      90 ..     711     789 ..     699     805 .. 0.74
   2 ?   11.0   0.4   8.7e-05      0.39      21     124 ..     811     924 ..     802     926 .. 0.69

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.081
   Ependymin  16 kveYeidlktksCkkkklkepfrplevp.dnatflgqvvlGsssapgegvlvnswsgkleeekg...kytttvteegCi 90 
                    Ye++lkt++ + + l+e++r+l+ +  n     q+++G+ s+ +++v++  +  ++ ++++   + + +  + +C 
  EPX73690.1 711 CNNYELKLKTSEKENSVLHEKYRSLQEQyYNNLQEYQTIVGQLSVYTKQVETYRYDLENLHKEKnlwNSVESKLSAECS 789
                 567999999999999999999999987735666678999*************999987766666234334444444555 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 8.7e-05
   Ependymin  21 idlktksCkkkklkepfrplevp.........dnatflgqvvlGss.sapgegvlvnswsgkleeekgkytttvteegCipvsesfsteksgvvttsff 109
                 ++ +++ C ++ l++++ + +v          +    ++++++ +s  +++ ++++n+  +k++e k+++t+ vt+   +  +++  +++ +++ ++++
  EPX73690.1 811 VHEQEHDCIVNLLNNRLSECSVDlrnanakisEYTDDIKNITMQNSyNIKDYQMQLNTMGSKISELKQELTSQVTRCTSLVNENQELKNSLKFTQERYM 909
                 55566666666666666666666544332222222223333443333567788899999999999999********7777777777889999******* PP

   Ependymin 110 dvtlgisdpnvFipP 124
                 ++++ i +p+ F  P
  EPX73690.1 910 NLQTNILSPKSFGDP 924
                 **********99766 PP

>> Imm27  Immunity protein 27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1       1.4   6.1e+03      12      50 ..     816     857 ..     810     863 .. 0.64
   2 ?   10.1   1.4   0.00012      0.53      18      47 ..    1094    1120 ..    1086    1126 .. 0.90
   3 ?   -1.0   0.1      0.35   1.6e+03      22      39 ..    1308    1325 ..    1294    1326 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.4
       Imm27  12 lariksliknkLkelksd...edgwetlYkdpndgrlWeLaY 50 
                  + i  l +n+L+e + d    + +  +Y d+  +   + +Y
  EPX73690.1 816 HDCIVNLLNNRLSECSVDlrnANAKISEYTDDIKNITMQNSY 857
                 466778899999998876222455667788877766555555 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00012
       Imm27   18 liknkLkelksdedgwetlYkdpndgrlWe 47  
                    +n+L elks++++w+t   d++d+  W+
  EPX73690.1 1094 VKANYL-ELKSKSEEWTTMHADSEDN--WK 1120
                  6789**.*******************..86 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 0.35
       Imm27   22 kLkelksdedgwetlYkd 39  
                   +k l +d+++w+t++++
  EPX73690.1 1308 SIKLLHEDNERWKTRFQS 1325
                  455688899999988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1786 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3560  (0.198561); expected 358.6 (0.02)
Passed bias filter:                      503  (0.0280551); expected 358.6 (0.02)
Passed Vit filter:                       247  (0.0137766); expected 17.9 (0.001)
Passed Fwd filter:                       132  (0.00736237); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 6.33u 0.44s 00:00:06.77 Elapsed: 00:00:01.20
# Mc/sec: 4514.53
//
Query:       EPX73691.1  [L=584]
Description: epsin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.4e-46  154.9   0.0    1.4e-45  154.4   0.0    1.3  1  ENTH      ENTH domain
    3.2e-25   88.3 128.7    1.6e-08   34.8  22.0    5.8  5  DUF1720   Domain of unknown function (DUF1720)
    0.00012   21.2   0.0    0.00022   20.3   0.0    1.4  1  ANTH      ANTH domain
  ------ inclusion threshold ------
       0.54   10.3  12.6      0.065   13.2   1.0    3.4  3  UIM       Ubiquitin interaction motif


Domain annotation for each model (and alignments):
>> ENTH  ENTH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  154.4   0.0   3.1e-49   1.4e-45       1     125 []      15     138 ..      15     138 .. 0.99

  Alignments for each domain:
  == domain 1  score: 154.4 bits;  conditional E-value: 3.1e-49
                 --HHHHHHHHHTSSSSSS--HHHHHHHHHHTTSHHHHHHHHHHHHHHHHH--GGGHHHHHHHHHHHHHHHHHS-HHHHHHHHHTHHHHHGGGG---B-T CS
        ENTH   1 yseteskvreatnndpwGpsnkllteiarltyskkelseiisvitkrLqnnkgkewrsvlKaLtlieYLlknGseqvidwlkenisiiktlsefkyide 99 
                 y++t++kvr+at+nd wGps++ ++eia lt++++e+ e++++i++rL n+kgk+wr+v+K+L l+eY+l+ Gse+v++w+k+ni+ii+tl+ef ++de
  EPX73691.1  15 YTDTQVKVRNATTNDAWGPSGSAMAEIAALTFDQNEMLEVVDIIDRRL-NDKGKNWRHVFKSLSLLEYCLHSGSENVVRWAKDNIYIITTLREFVFVDE 112
                 789*********************************************.************************************************** PP

                 TS-B-HHHHHHHHHHHHHHHT-HHHH CS
        ENTH 100 egkdeglniRkkakkiislledeerl 125
                 +g+d+g+n+R+kak+i +ll+d+e l
  EPX73691.1 113 HGHDQGQNVRSKAKEISALLSDDESL 138
                 ***********************986 PP

>> DUF1720  Domain of unknown function (DUF1720)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.8  22.0   3.6e-12   1.6e-08      15      75 .]     275     325 ..     260     325 .. 0.82
   2 !   29.9  14.2   1.2e-10   5.3e-07      23      75 .]     319     356 ..     317     356 .. 0.93
   3 !   31.2  17.3   4.7e-11   2.1e-07       1      74 [.     357     414 ..     357     420 .. 0.92
   4 !   28.0  29.2   4.7e-10   2.1e-06       1      74 [.     401     484 ..     401     485 .. 0.92
   5 ?    2.7  25.9     0.039   1.7e+02      20      72 ..     512     578 ..     492     580 .. 0.87

  Alignments for each domain:
  == domain 1  score: 34.8 bits;  conditional E-value: 3.6e-12
     DUF1720  15 qpqqq....qplqpqpTGfmpqqqtgqglqpqpTGggqfapglqpqqTGfqeqaqqglqPqaTGf 75 
                 ++q+     +p+qpqpTGfm++q+tg  + pq+TG       +qpq+TGf       + Pq+TGf
  EPX73691.1 275 AFQPVdffgNPVQPQPTGFMQPQPTG-FMRPQTTG------FVQPQPTGF-------VYPQNTGF 325
                 23333678899**************9.********......488******.......*******8 PP

  == domain 2  score: 29.9 bits;  conditional E-value: 1.2e-10
     DUF1720  23 qpqpTGfmpqqqtgqglqpqpTGggqfapglqpqqTGfqeqaqqglqPqaTGf 75 
                  pq+TGf+++q t  g+qpq TG       + pq TGf       +qPq TGf
  EPX73691.1 319 YPQNTGFVQPQHT--GVQPQHTG------MMRPQHTGF-------MQPQHTGF 356
                 69*******9999..9*******......689******.......*******8 PP

  == domain 3  score: 31.2 bits;  conditional E-value: 4.7e-11
     DUF1720   1 lqpqqtGfqppqqqqpqqqqplqpqpTGfmpqqqtgqglqpqpTGggqfapglqpqqTGfqeqaqqglqPqaTG 74 
                 +qpq+tGf +p    ++ + ++qp +TGf ++ + +  + p+ TG      ++qpq+TGf         Pq+TG
  EPX73691.1 357 VQPQHTGFSQPFDSNNPFP-MMQPHRTGFAQPHPVQ-LMPPNHTG------YVQPQSTGF--------RPQNTG 414
                 59****************9.***********99987.9*******......7999*****........888887 PP

  == domain 4  score: 28.0 bits;  conditional E-value: 4.7e-10
     DUF1720   1 lqpqqtGfqppqqqqpqqq...qplqpqpTGfmpqqqtgq......glqpqpTG.ggqfap..glqpqqTGfqeqaqqglqPqaTG 74 
                 +qpq+tGf p++++ ++++   +plqpq+TG+m++q+t+       +l+  +TG +++fa+  +l pq+ ++  + ++++ P +TG
  EPX73691.1 401 VQPQSTGFRPQNTGLNANNpysRPLQPQSTGYMKPQPTQPqpqpqpQLETTKTGsNNPFAQfaKLSPQPAAP--MTAKPMRPVRTG 484
                 59**************999*****************99887877777777789*******************..999********9 PP

  == domain 5  score: 2.7 bits;  conditional E-value: 0.039
     DUF1720  20 qplqpqpTGfmpqqqtgqglqpqpTGggqfapglqpqqTGf................qeqaqqglqPqa 72 
                 + l +q TG    ++ gq +q+q+TG +++ p + +q+TG                 q+++qq++qPq 
  EPX73691.1 512 ARLPSQHTGSRFTNSAGQTIQSQATG-NTLNP-FHTQPTGAqqqmysypqnmngnsqQNMQQQSMQPQV 578
                 5678999**999999999********.99998.********99999999999999*999999*****95 PP

>> ANTH  ANTH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   4.8e-08   0.00022       3     108 ..      19     122 ..      17     127 .. 0.81

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 4.8e-08
                 HHHHHHHT-SSS---HHHHHHHHHHHCSTTS-HHHHHHHHHHHCTSS..SHHHHHHHHHHHHHHHHHS-CHHHHHHHHTT-----TT---TSHHHSTHH CS
        ANTH   3 evavvKAtshdevPpkekhvreilvltssrekvaalvwalsrrlklt.rnwvvalKaLilvHklLreGhpsveqellsarrrisellnlssfddsssks 100
                 +v v+ At+ d+  p    + ei  lt +++++ ++v+ + rrl+++ +nw  ++K+L l+   L  G+++v + +    ++i  +  l++f    +++
  EPX73691.1  19 QVKVRNATTNDAWGPSGSAMAEIAALTFDQNEMLEVVDIIDRRLNDKgKNWRHVFKSLSLLEYCLHSGSENVVRWAK---DNIYIITTLREFVFVDEHG 114
                 7899****************************************98659**********************995443...3344444444443344567 PP

                 HHHHHHHH CS
        ANTH 101 wdysafir 108
                 +d+++++r
  EPX73691.1 115 HDQGQNVR 122
                 77777666 PP

>> UIM  Ubiquitin interaction motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.4      0.01        46       1      14 [.     211     224 ..     211     227 .. 0.89
   2 ?   13.2   1.0   1.5e-05     0.065       3      16 ..     241     254 ..     241     254 .. 0.96
   3 ?   -2.1   0.4       1.1     5e+03       5      11 ..     490     496 ..     489     496 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.01
         UIM   1 dEdedLqrAlalSl 14 
                 d+d +L+r+++ S 
  EPX73691.1 211 DDDSELRRVIEESK 224
                 89*********985 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 1.5e-05
         UIM   3 dedLqrAlalSlqE 16 
                 ++dLq+A++lS +E
  EPX73691.1 241 EADLQKAIQLSKEE 254
                 89***********9 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 1.1
         UIM   5 dLqrAla 11 
                  +++A+a
  EPX73691.1 490 NIAQAIA 496
                 69****8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (584 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1251  (0.0697752); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.41
# Mc/sec: 4239.22
//
Query:       EPX73692.1  [L=270]
Description: hexaprenyldihydroxybenzoate methyltransferase Coq3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-24   86.8   0.0    3.2e-24   85.6   0.0    1.5  2  Methyltransf_23  Methyltransferase domain
      3e-23   82.3   0.0    5.4e-23   81.5   0.0    1.4  1  Methyltransf_11  Methyltransferase domain
    1.8e-21   76.5   0.0    4.2e-21   75.3   0.0    1.6  2  Methyltransf_31  Methyltransferase domain
    7.4e-18   65.1   0.0    1.4e-17   64.1   0.0    1.5  1  Methyltransf_25  Methyltransferase domain
    5.1e-17   62.4   0.0    1.2e-16   61.2   0.0    1.6  1  Methyltransf_12  Methyltransferase domain
    7.5e-13   48.4   0.0    1.1e-12   47.9   0.0    1.2  1  CMAS             Mycolic acid cyclopropane synthetase
    2.5e-11   43.5   0.0    3.8e-11   42.9   0.0    1.2  1  PrmA             Ribosomal protein L11 methyltransferase (Prm
    3.1e-10   39.5   0.0    4.6e-10   38.9   0.0    1.2  1  Methyltransf_9   Protein of unknown function (DUF1698)
    4.2e-09   36.3   0.0      6e-09   35.8   0.0    1.2  1  NodS             Nodulation protein S (NodS)
    1.1e-07   31.5   0.0    1.5e-07   31.0   0.0    1.1  1  Ubie_methyltran  ubiE/COQ5 methyltransferase family
    4.2e-07   29.7   0.0    7.1e-07   28.9   0.0    1.3  1  MTS              Methyltransferase small domain
    3.8e-06   26.2   0.0    5.8e-06   25.6   0.0    1.3  1  DREV             DREV methyltransferase
    1.4e-05   25.1   0.0    2.3e-05   24.5   0.0    1.3  1  Methyltransf_32  Methyltransferase domain
    0.00047   19.9   0.0    0.00097   18.9   0.0    1.5  1  TPMT             Thiopurine S-methyltransferase (TPMT)
     0.0011   18.5   0.0     0.0016   18.1   0.0    1.3  1  Methyltransf_15  RNA cap guanine-N2 methyltransferase
      0.003   16.9   0.0     0.0069   15.7   0.0    1.6  1  GidB             rRNA small subunit methyltransferase G
     0.0051   16.2   0.0     0.0071   15.8   0.0    1.2  1  TehB             Tellurite resistance protein TehB
     0.0086   15.6   0.2       0.25   10.8   0.0    2.4  2  CheR             CheR methyltransferase, SAM binding domain
     0.0092   15.9   0.0      0.016   15.1   0.0    1.4  1  Methyltransf_18  Methyltransferase domain
  ------ inclusion threshold ------
      0.015   14.9   0.1      0.037   13.6   0.1    1.7  1  MetW             Methionine biosynthesis protein MetW
       0.02   14.6   0.0      0.038   13.7   0.0    1.4  1  PCMT             Protein-L-isoaspartate(D-aspartate) O-methyl
      0.026   13.6   0.0       0.04   13.0   0.0    1.3  1  RrnaAD           Ribosomal RNA adenine dimethylase
       0.09   13.1   0.0       0.14   12.5   0.0    1.4  1  AdoMet_MTase     Predicted AdoMet-dependent methyltransferase
       0.15   12.0   0.0       0.27   11.2   0.0    1.5  1  ADH_zinc_N       Zinc-binding dehydrogenase


Domain annotation for each model (and alignments):
>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       2.9   2.2e+03     126     151 ..      40      65 ..      24      73 .. 0.70
   2 !   85.6   0.0   4.3e-27   3.2e-24      15     162 ..      70     232 ..      55     234 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 2.9
  Methyltransf_23 126 edrllldwlylvpagrhisffsarsl 151
                       d l++ w+ ++ ++r++++++ + +
       EPX73692.1  40 FDALAKTWWDWNGESRLLHLMNPTRI 65 
                      45566778888888888888876654 PP

  == domain 2  score: 85.6 bits;  conditional E-value: 4.3e-27
  Methyltransf_23  15 rll..pklraggrvLdiGcGtGillevlrengfsvtgvDlspeaveiae....kakkaqkdqfdeq.........eaaepqgkfdlIvlrevle 93 
                      +++  ++ +ag+ +Ld+GcG Gil+e++++ g++v+g+D+s +a e a+    k      d+  ++         e ++ +++fd+++++ev e
       EPX73692.1  70 QIVrqKTPFAGKQILDVGCGGGILSESMARLGANVIGIDASKKALEVAKdhskK------DPSLRDrleyihgpiEQQNFKKQFDIVTCMEVVE 157
                      44432347999********************************99998544442......3333333333334445555677************ PP

  Methyltransf_23  94 hvpdppellrqiatllkpgGylllseplasl....kedrllldwlylvpagrhi..sffsarslkelleeaGlev 162
                      hv +p   l ++ +l+kp+Gyl+ls++ + l        l++ +l +vp+g+h+  ++++ ++l e ++e +++v
       EPX73692.1 158 HVTNPRGFLESLMNLVKPNGYLMLSTISRTLmarfLTIFLAERVLGIVPNGTHSyeKYIRPEELTEFFREHQWKV 232
                      **************************988877765466677779999**********************999876 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.5   0.0   7.2e-26   5.4e-23       1      95 [.      84     180 ..      84     181 .. 0.98

  Alignments for each domain:
  == domain 1  score: 81.5 bits;  conditional E-value: 7.2e-26
                      EEET-TTSHHHHHHHHTTSEEEEEES-HHHHHHHHHHCCHHT-...EEEETTEECCCTSS-TT-EEEEEEES-CCC-CCHHHHHHHHHHHEEEE CS
  Methyltransf_11   1 LdvGcGtGrlaealakrgarvvgvDlskemlklakekaseegl...kvefvvadaeklpfednsfDlvvssevlhhvedpekalkeiaRvLkpg 91 
                      LdvGcG+G+l+e +a+ ga+v+g+D sk++l++ak+++++++    ++e++++ +e+ +f++ +fD+v++ ev++hv +p+ +l+ ++ ++kp+
       EPX73692.1  84 LDVGCGGGILSESMARLGANVIGIDASKKALEVAKDHSKKDPSlrdRLEYIHGPIEQQNFKK-QFDIVTCMEVVEHVTNPRGFLESLMNLVKPN 176
                      8****************************************99*****************99.******************************* PP

                      EEEE CS
  Methyltransf_11  92 Gllv 95 
                      G+l+
       EPX73692.1 177 GYLM 180
                      **98 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0         4     3e+03      99     129 ..       7      38 ..       3      65 .. 0.64
   2 !   75.3   0.0   5.7e-24   4.2e-21       4     124 ..      80     198 ..      77     229 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 4
  Methyltransf_31  99 rvlkpggilliedpr.llaelpakveeeskay 129
                      ++lk+g++ l +d +  l++++ +  ++++ +
       EPX73692.1   7 SLLKTGSRSLKRDLWgSLSQQRNHTVSNQEIQ 38 
                      67777777777777765666666666666543 PP

  == domain 2  score: 75.3 bits;  conditional E-value: 5.7e-24
  Methyltransf_31   4 glrvlDlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaqklgld..nveFeqgdieeleklledekfDlilsnevlnaladpdkile 95 
                      g+++lD+GCG G l+  +a +l  +a+v+GiD s++a+e+A+ +++k  +   ++e  +g+ie+ +  ++ ++fD++++ ev+ ++++p  +le
       EPX73692.1  80 GKQILDVGCGGGILSESMA-RL--GANVIGIDASKKALEVAKDHSKKDPSLrdRLEYIHGPIEQQN--FK-KQFDIVTCMEVVEHVTNPRGFLE 167
                      799****************.66..589*****************9999885569999999999966..88.9********************** PP

  Methyltransf_31  96 eiervlkpggilliedpr..llaelpakvee 124
                      ++ +++kp+g+l++++++  l+a+++ ++ +
       EPX73692.1 168 SLMNLVKPNGYLMLSTISrtLMARFLTIFLA 198
                      *****************97755555544444 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.1   0.0   1.9e-20   1.4e-17       1      97 []      83     177 ..      83     177 .. 0.93

  Alignments for each domain:
  == domain 1  score: 64.1 bits;  conditional E-value: 1.9e-20
                      EEEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTT...TEEEEESBCCGBSSSTTTEEEEEEESTGGGSSHHHHHHHHHHHHH CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeegl...nvefvqgdaedlpfedgsfDlvvssgalhhlsdedlekalkeiar 91 
                      +Ld+GcG G l++ +a+ +  a+v+g+D s+++le a+ + +++     ++e+++g +e+ +f++ +fD+v+++ +++h++++  + +l+ + +
       EPX73692.1  83 ILDVGCGGGILSESMARLG--ANVIGIDASKKALEVAKDHSKKDPSlrdRLEYIHGPIEQQNFKK-QFDIVTCMEVVEHVTNP--RGFLESLMN 171
                      8***************995..*******************988544799**************97.*******877***9955..69******* PP

                      HEEEEE CS
  Methyltransf_25  92 vLkpgG 97 
                      ++kp+G
       EPX73692.1 172 LVKPNG 177
                      ****99 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.2   0.0   1.6e-19   1.2e-16       1      99 []      84     179 ..      84     179 .. 0.93

  Alignments for each domain:
  == domain 1  score: 61.2 bits;  conditional E-value: 1.6e-19
  Methyltransf_12   1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvelealdlldldggssfDlvvasnvlhhlkdirevldnirklLk 94 
                      L++GcG G l++ +++   +++++g+D s++a+e ak + +k ++   +++e+ +  ++++  +++fD+v++ +v++h+ ++r +l+++ +l+k
       EPX73692.1  84 LDVGCGGGILSESMARL--GANVIGIDASKKALEVAKDHSKK-DPSLRDRLEYIHGPIEQQNFKKQFDIVTCMEVVEHVTNPRGFLESLMNLVK 174
                      8****************..**************666666555.556789********************************************* PP

  Methyltransf_12  95 pgGrl 99 
                      p+G+l
       EPX73692.1 175 PNGYL 179
                      ***87 PP

>> CMAS  Mycolic acid cyclopropane synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.9   0.0   1.4e-15   1.1e-12      62     172 ..      79     189 ..      60     245 .. 0.76

  Alignments for each domain:
  == domain 1  score: 47.9 bits;  conditional E-value: 1.4e-15
                 TT-EEEEES-TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHTS-SSS-EEEEE...S-GGG-----SEEEEES-GGGTSGGGHHHHHHHHHHHS- CS
        CMAS  62 pGmtlLdiGcGWGslvrraverydvkvvglTlSkeqaklakkrvdeldlerkvevkl...ldyedldekvdrvvsvgafehvgkenydtffkklkkllk 157
                 +G+++Ld+GcG G l   + +r +++v+g+  Sk+  ++ak++ ++  + r++  ++    + +++++++d v  ++++ehv +     f + l +l+k
  EPX73692.1  79 AGKQILDVGCGGGILSESM-ARLGANVIGIDASKKALEVAKDHSKKDPSLRDRLEYIhgpIEQQNFKKQFDIVTCMEVVEHVTN--PRGFLESLMNLVK 174
                 69*********77666555.556******************998877655544333312246899****************975..569********** PP

                 TT-EEEEEEEEE--H CS
        CMAS 158 edGllllhtitslhk 172
                 ++G l+l ti ++  
  EPX73692.1 175 PNGYLMLSTISRTLM 189
                 **********87654 PP

>> PrmA  Ribosomal protein L11 methyltransferase (PrmA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.9   0.0   5.1e-14   3.8e-11     161     261 ..      79     184 ..      64     191 .. 0.81

  Alignments for each domain:
  == domain 1  score: 42.9 bits;  conditional E-value: 5.1e-14
        PrmA 161 egeevlDvGtGSGiLaiaaakLgakkvvavDiDevAvkvakeNaelN.kveaklev.alseellk.eekadvivaNILaevlie...laedikklvkeg 253
                 +g+++lDvG+G GiL+   a+Lga +v+++D  + A++vak+  ++  +++++le  + + e+++ ++++d++ +  + e +++   ++e++++lvk++
  EPX73692.1  79 AGKQILDVGCGGGILSESMARLGA-NVIGIDASKKALEVAKDHSKKDpSLRDRLEYiHGPIEQQNfKKQFDIVTCMEVVEHVTNprgFLESLMNLVKPN 176
                 4679*******************9.599**************999984566688752333333334599******8888887655559*********** PP

        PrmA 254 gllilSGi 261
                 g+l+lS i
  EPX73692.1 177 GYLMLSTI 184
                 ******87 PP

>> Methyltransf_9  Protein of unknown function (DUF1698)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.9   0.0   6.2e-13   4.6e-10      51     220 ..      19     184 ..       5     187 .. 0.82

  Alignments for each domain:
  == domain 1  score: 38.9 bits;  conditional E-value: 6.2e-13
                     ESSSS-EEE-SS..-HHHHHHHHHHHHTT----CE-EEETTEEE--SEEHHHHHHHHGGGS.--TT-EEEEET-TTSHHHHHHHHCT-SEEEEE- CS
  Methyltransf_9  51 dlkdsvtiekeeqlsegekkklekllralmPWrkGPfslfGvdidteWrsdwkWdrvlphlsdlkgrtildvGcgnGyhlwrmvgegaklvvGid 145
                     dl  s++ ++++++s++e +++ +l +++  W      l   ++    r d+  + v++   ++ g++ildvGcg G     m+  ga+ v+Gid
      EPX73692.1  19 DLWGSLSQQRNHTVSNQEIQHFDALAKTWWDWNGESRLL---HLMNPTRIDFISQIVRQKT-PFAGKQILDVGCGGGILSESMARLGAN-VIGID 108
                     666777888888888999999999989988886544444...4556679999888777765.9***************99999888875.89*** PP

                     --HHHHHHHHHH.HCCTTTTSSEEEE---GGGS-T---EEEEEEES-GGG-S-HHHHHHHHHCTEEEEEEEEEEEE CS
  Methyltransf_9 146 Pselfliqfeav.rkllgedqrahllplgieqlpeleafdtvfsmGvlyhrrsPldhllqlkdqlvkgGelvletl 220
                      s+  l   +   +k  +   r   +   ieq +  + fd+v  m v+ h   P   l  l + ++ +G l+l t+
      EPX73692.1 109 ASKKALEVAKDHsKKDPSLRDRLEYIHGPIEQQNFKKQFDIVTCMEVVEHVTNPRGFLESLMNLVKPNGYLMLSTI 184
                     **999876665415555566677778889********************************************986 PP

>> NodS  Nodulation protein S (NodS)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.8   0.0   8.1e-12     6e-09      46     169 ..      82     206 ..      57     218 .. 0.87

  Alignments for each domain:
  == domain 1  score: 35.8 bits;  conditional E-value: 8.1e-12
        NodS  46 dalevGcaaGalterlapyckrltvvdvveeaiararervkessh....iswivsdvqqfstdekfdlivvaevlyyiedvaelraavrnlvsllapdg 140
                 ++l+vGc  G l+e +a +  ++  +d  ++a++ a+   k+ +     + +i   ++q + +++fd++ + ev+   e+v++ r+ ++ l++l++p+g
  EPX73692.1  82 QILDVGCGGGILSESMARLGANVIGIDASKKALEVAKDHSKKDPSlrdrLEYIHGPIEQQNFKKQFDIVTCMEVV---EHVTNPRGFLESLMNLVKPNG 177
                 68***********************************99999875222268999*******************96...6677889************** PP

        NodS 141 qlvfGsardavcrrwGhvaGaetvlalln 169
                 +l++ +       r+  ++ ae vl ++ 
  EPX73692.1 178 YLMLSTISRTLMARFLTIFLAERVLGIVP 206
                 *****999999999999*****9999875 PP

>> Ubie_methyltran  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.0   0.0     2e-10   1.5e-07      39     162 ..      71     192 ..      59     207 .. 0.85

  Alignments for each domain:
  == domain 1  score: 31.0 bits;  conditional E-value: 2e-10
                      HHHH--S--TTEEEEES-TT-HHHHHHHHHHHHHHEEEEEES-HHHHHHHHHHHHHHTSS..TEEEEE--TTT-TTS-T-EEEEEEES-GGG-S CS
  Ubie_methyltran  39 veklvavkrgakvlDvagGtgDlafklsdsvgekgkvvvlDinenmLkvgekklkeegki..nieflqanaeeLpfeddsfDvvtvsfGlrnvt 130
                      + + +++  g+++lDv +G g l+ ++++      +v+++D +++ L+v++++ k++     ++e++++  e+ +f++  fD+vt    +  vt
       EPX73692.1  71 IVRQKTPFAGKQILDVGCGGGILSESMAR---LGANVIGIDASKKALEVAKDHSKKDPSLrdRLEYIHGPIEQQNFKK-QFDIVTCMEVVEHVT 160
                      34444555688*********987665554...3458*****************9999887789**********99986.6************** PP

                      -HHHHHHHHHHHEEEEEEEEEEEE----SHHH CS
  Ubie_methyltran 131 DklkaLkeayrvlkpGGrlvvlefskvelpll 162
                      +    L++++  +kp G l+   +s+  +  +
       EPX73692.1 161 NPRGFLESLMNLVKPNGYLMLSTISRTLMARF 192
                      *******************9999999877655 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.9   0.0   9.6e-10   7.1e-07      15     102 ..      64     151 ..      60     161 .. 0.84

  Alignments for each domain:
  == domain 1  score: 28.9 bits;  conditional E-value: 9.6e-10
                 S--HHHHHHHHHCHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHT.TGC..EEEEE-STTTTSTTS-EEEEE CS
         MTS  15 klDkGsklLletlpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenlean.kle..vevvasdvleeveekkfdliv 102
                 ++D  s++  ++ p  + +++lD+GcG G+l+ ++a+   +  v  +d++++Ale+ak   ++   l+  +e+++  + ++  +k+fd++ 
  EPX73692.1  64 RIDFISQIVRQKTPF-AGKQILDVGCGGGILSESMARLGAN--VIGIDASKKALEVAKDHSKKDpSLRdrLEYIHGPIEQQNFKKQFDIVT 151
                 567777777776666.7889*****************9988..99*************987765144478999999999999999999986 PP

>> DREV  DREV methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.0   7.8e-09   5.8e-06      93     189 ..      78     184 ..      63     239 .. 0.77

  Alignments for each domain:
  == domain 1  score: 25.6 bits;  conditional E-value: 7.8e-09
        DREV  93 qedkklldlGaGdGeitkrvaptfeevyatelsetmrd...rlkkkk.......ynvlsalelqetdvkldlilclnlldrcfdplklledirsalepn 181
                 +  k++ld+G G G +++ +a    +v   ++s++  +     +kk+         + + +e q+ + ++d+++c+++++   +p  +le + +  +pn
  EPX73692.1  78 FAGKQILDVGCGGGILSESMARLGANVIGIDASKKALEvakDHSKKDpslrdrlEYIHGPIEQQNFKKQFDIVTCMEVVEHVTNPRGFLESLMNLVKPN 176
                 56799******************999888888877543111333333111111123567899999********************************** PP

        DREV 182 grvivalv 189
                 g  +++ +
  EPX73692.1 177 GYLMLSTI 184
                 *9998865 PP

>> Methyltransf_32  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   0.0     3e-08   2.3e-05      11      93 ..      66     142 ..      63     176 .. 0.85

  Alignments for each domain:
  == domain 1  score: 24.5 bits;  conditional E-value: 3e-08
  Methyltransf_32  11 elvakllkelakesgaltvvDvGaGkgYLsfvlalkekeyklkvvgidakeelvekaekraeklgkkfnkrlsfaelsieeat 93 
                       ++++++++ ++  + ++++DvG+G g Ls  +a     ++ +v+gida+++  e a++  +k  + + +rl+ +++ ie+++
       EPX73692.1  66 DFISQIVRQ-KTPFAGKQILDVGCGGGILSESMAR----LGANVIGIDASKKALEVAKDHSKKDPS-LRDRLEYIHGPIEQQN 142
                      688898888.7888899******************....7******************99998774.4488888888777765 PP

>> TPMT  Thiopurine S-methyltransferase (TPMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   1.3e-06   0.00097      27      85 ..      69     127 ..      50     152 .. 0.80

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 1.3e-06
                 HHHHHT.T-S--EEEEEET-TT-HHHHHH-BTTEEEEEE-S-HHHHHHHHHHHTTSGGG CS
        TPMT  27 kkfldalkakaglrvlvPlCGkaldlvwlAeqgrevvGvelselAvekffeeanlepkv 85 
                 ++ + + +  ag+++l  +CG+++    +A  g +v+G++ s++A+e + +  +  p +
  EPX73692.1  69 SQIVRQKTPFAGKQILDVGCGGGILSESMARLGANVIGIDASKKALEVAKDHSKKDPSL 127
                 555666667788899999*****************************976666666653 PP

>> Methyltransf_15  RNA cap guanine-N2 methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   2.1e-06    0.0016       3      61 ..      82     155 ..      80     217 .. 0.73

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 2.1e-06
  Methyltransf_15   3 vilDlfsGaGGnviqfalvfekviaieinleklacaqhNaev.Ygvsdkitlvlgdvfe..............l 61 
                       ilD+ +G+G  +  +a+ + +vi+i+ +++ l++a+   +      d++ +++g +++              +
       EPX73692.1  82 QILDVGCGGGILSESMARLGANVIGIDASKKALEVAKDHSKKdPSLRDRLEYIHGPIEQqnfkkqfdivtcmeV 155
                      69*********************************986665515679********9998555555555555541 PP

>> GidB  rRNA small subunit methyltransferase G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   9.2e-06    0.0069       7     146 ..      42     181 ..      36     185 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 9.2e-06
                 HHHHHHHHHHHHS---S--SHHHHHHHCHHHHHHHGGCS-CCC-.EEEETSTTTTTHHHHHHH-TTSEEEEEES-HHHHHHHHHHHHH..CT-SSEEEE CS
        GidB   7 kYlelllkwNkkinLtsikepeellerhlldslsvlellkekrdkviDvGsGaGlPGipLaiarpelkltLleslekkiaFLeevkee..lklenveiv 103
                 ++++    wN +  L++  +p ++    +  ++     +  k+  ++DvG G+G+  +  ++ar   +++ +++++k  +  +  +++     + +e++
  EPX73692.1  42 ALAKTWWDWNGESRLLHLMNPTRIDF--ISQIVRQKTPFAGKQ--ILDVGCGGGI--LSESMARLGANVIGIDASKKALEVAKDHSKKdpSLRDRLEYI 134
                 55555566666666666666666532..444444444444444..*********8..55567777788999******999998877653333467**** PP

                 ES-CCCTTTTT-EEEEEEC-SSSH....HHHHHHHCCCEEEEEEEEE CS
        GidB 104 earaeekqeeekydvvtsRAlasl....nelteillkllkegglila 146
                 +  +e+++ ++++d+vt+  + +     + + e l++l+k++g++++
  EPX73692.1 135 HGPIEQQNFKKQFDIVTCMEVVEHvtnpRGFLESLMNLVKPNGYLML 181
                 *****************987654411115678899999****99885 PP

>> TehB  Tellurite resistance protein TehB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   9.5e-06    0.0071      32     129 ..      81     178 ..      60     189 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 9.5e-06
                 -EEEEES-TTSHHHHHHHHTT-EEEEEES-HHHHHHHHHHHHHT.T-.TTEEEEE--GGG----S-EEEEEEESSGGGS-GGGHHHHHHHHHHTEEEEE CS
        TehB  32 gkvldlgcgqgrnslylsllgydvtawdknensiafleeikeke.nl.knistalydineaklderydfilstvvlmfleaeripsiienmqectkvgg 128
                  ++ld+gcg g  s  ++ lg +v  +d  +++++  ++  +k+ +l + ++     i++ ++++++d++    v+  + +      +e + +  k+ g
  EPX73692.1  81 KQILDVGCGGGILSESMARLGANVIGIDASKKALEVAKDHSKKDpSLrDRLEYIHGPIEQQNFKKQFDIVTCMEVVEHVTNP--RGFLESLMNLVKPNG 177
                 468******************************99998877766244255777777899*********99876665544332..244555555555666 PP

                 E CS
        TehB 129 y 129
                 y
  EPX73692.1 178 Y 178
                 5 PP

>> CheR  CheR methyltransferase, SAM binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.1      0.13        99      61      83 ..      98     120 ..      67     135 .. 0.82
   2 !   10.8   0.0   0.00033      0.25     129     173 ..     139     181 ..     124     187 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.13
                 SSS-EEEEEEESSCHHHHHHHHT CS
        CheR  61 aklkvkilAtDidlkvlekAkag 83 
                 a+l  +++++D ++k+le Ak  
  EPX73692.1  98 ARLGANVIGIDASKKALEVAKDH 120
                 45567899*********999975 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00033
                 T-SGGG--EEEEEE-SSGGGC-CHHHHHHHHHHHCCEEEEEEEEE CS
        CheR 129 ekksvlgklDvifcrnvliYfdeetqekvlerfaeklkpgglLll 173
                 e++++++++D+++c +v+   +++  +  le +++ +kp+g+L+l
  EPX73692.1 139 EQQNFKKQFDIVTCMEVVEHVTNP--RGFLESLMNLVKPNGYLML 181
                 46999*************998876..689**************98 PP

>> Methyltransf_18  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   2.2e-05     0.016       4      72 ..      64     136 ..      62     153 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 2.2e-05
  Methyltransf_18   4 RLkaiaslvek.....gsrvaDiGtDHgylpiylvkegkakkviasDinegplekakeniek.agledkievrls 72 
                      R+  i ++v++     g++++D+G+  g+l+  +++ g   +vi +D ++++le ak++ +k  +l+d++e + +
       EPX73692.1  64 RIDFISQIVRQktpfaGKQILDVGCGGGILSESMARLGA--NVIGIDASKKALEVAKDHSKKdPSLRDRLEYIHG 136
                      6666666666544454789***************98775..5*****************9984466777777655 PP

>> MetW  Methionine biosynthesis protein MetW
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1     5e-05     0.037      13     100 ..      79     171 ..      64     176 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 5e-05
        MetW  13 pgsrvldlGcGdGellellkeekqvdgrGleldeegvaec.........vakGlsviqgdldkdlenfedksfdyvvlsqtlqatrnpkevldellr 100
                 +g ++ld+GcG G l e ++   + +  G++ +++++  +         +   l+ i+g +++  +nf  k+fd+v     +  + np+  l+ l+ 
  EPX73692.1  79 AGKQILDVGCGGGILSESMAR-LGANVIGIDASKKALEVAkdhskkdpsLRDRLEYIHGPIEQ--QNF-KKQFDIVTCMEVVEHVTNPRGFLESLMN 171
                 5779*********99998854.77788888877776554311100001133346666666655..345.5789999999999999999999998875 PP

>> PCMT  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   5.1e-05     0.038      74     121 ..      80     124 ..      65     137 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 5.1e-05
                 T-EEEEES-TTSHHHHHHHHHHCTTCEEEEEESBHHHHHHHHHHHHHC CS
        PCMT  74 garvLevGsGsGyltavlarlvgekgrvvsierikelveeakrnlkkl 121
                 g+++L+vG+G G+l+  +arl    ++v++i+ +k+  e ak + kk+
  EPX73692.1  80 GKQILDVGCGGGILSESMARLG---ANVIGIDASKKALEVAKDHSKKD 124
                 889***********99999873...4569******9999999877665 PP

>> RrnaAD  Ribosomal RNA adenine dimethylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   5.3e-05      0.04      19      92 ..      68     145 ..      59     192 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 5.3e-05
                 HHHHHHHH-GGTTSEEEEES-TTTCCHHHHHCC-SEEEEE-S-HHHHHHHHCHTT....TCCCEEEE-S-CCGHHHHH CS
      RrnaAD  19 ineIldklnleekltvleigpGkGilTeeLakrakqvvvlElderLakllqkkls....kdeklkvvhqDflkfetpe 92 
                 i +I+++  +   +++l++g G Gil+e++a    +v  +   ++ +++ +++ +    +  +l+ +h  + + ++++
  EPX73692.1  68 ISQIVRQKTPFAGKQILDVGCGGGILSESMARLGANVIGIDASKKALEVAKDHSKkdpsLRDRLEYIHGPIEQQNFKK 145
                 78999999999********************99999999999999998888877755556677777777777777776 PP

>> AdoMet_MTase  Predicted AdoMet-dependent methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   0.00019      0.14      59      93 ..      80     114 ..      25     128 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00019
  AdoMet_MTase  59 etsfvdvgcgngllvyvlaaegykgygidlrkrkl 93 
                    + + dvgcg g+l   +a  g +  gid+ k+ l
    EPX73692.1  80 GKQILDVGCGGGILSESMARLGANVIGIDASKKAL 114
                   45689*************************99754 PP

>> ADH_zinc_N  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00036      0.27      12      87 ..      99     181 ..      90     217 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00036
                 HTT-EEEEEESSHHHHHHHHHTT.ESEEEETTTC.HHHHHHHHHTTTSSEEE.....EEESSCSHHHHHHHH.HCEEEEEEEEE CS
  ADH_zinc_N  12 alGaeviavdsseeklelakklG.adevinykea.dlverikeltggegvdv.....vfecvGsgatleaal.kllkpgGrlvv 87 
                  lGa+vi++d s++ le ak+    d  +   +   +   i++   ++++d+     v+e+v +++ + ++l +l+kp+G l++
  EPX73692.1  99 RLGANVIGIDASKKALEVAKDHSkKDPSLRD-RLeYIHGPIEQQNFKKQFDIvtcmeVVEHVTNPRGFLESLmNLVKPNGYLML 181
                 58*******************8635555555.4333444444444466666666666888888888776554277888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (270 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       429  (0.0239277); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                        24  (0.00133861); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              24  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 2102.54
//
Query:       EPX73693.1  [L=211]
Description: vacuolar sorting protein Vps60 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.9e-49  166.2  20.2    5.7e-49  166.0  20.2    1.0  1  Snf7             Snf7
     0.0073   16.2  21.0      0.049   13.6   0.0    3.6  3  Prefoldin_2      Prefoldin subunit
  ------ inclusion threshold ------
      0.013   15.7   1.7      0.013   15.7   1.7    2.2  2  DUF1319          Protein of unknown function (DUF1319)
       0.02   13.9   2.4      0.037   13.0   2.4    1.4  1  mRNA_stabil      mRNA stabilisation
      0.032   14.0   6.6       0.91    9.2   0.0    2.1  2  Endotoxin_N      delta endotoxin, N-terminal domain
       0.13   12.1   7.8       0.36   10.7   7.8    1.7  1  Remorin_C        Remorin, C-terminal region
        0.5   10.4  30.9       0.11   12.5  17.3    2.6  2  FlxA             FlxA-like protein
       0.51   11.5   5.3        8.3    7.6   5.3    2.6  1  Cytochrom_C      Cytochrome c
       0.56    9.0  20.6      0.032   13.1  12.6    2.0  2  Spc7             Spc7 kinetochore protein
       0.64   10.3  17.3       0.31   11.3   4.0    2.8  3  Seryl_tRNA_N     Seryl-tRNA synthetase N-terminal domain
       0.78    9.7  11.0       0.26   11.2   7.4    2.0  2  BORCS8           BLOC-1-related complex sub-unit 8
       0.91   10.0  12.8        3.1    8.3   4.0    3.7  4  NPV_P10          Nucleopolyhedrovirus P10 protein
       0.93    8.3  15.4       0.41    9.5  12.0    1.8  2  Fmp27_WPPW       RNA pol II promoter Fmp27 protein domain
        2.3    8.5  13.5        2.5    8.4   0.2    3.5  4  XhlA             Haemolysin XhlA
        2.6    7.3  19.3         61    2.9  19.3    2.2  1  GAS              Growth-arrest specific micro-tubule binding
        3.6    6.1  14.1        2.9    6.4   9.3    2.0  2  FapA             Flagellar Assembly Protein A
        7.2    6.8  16.7         39    4.4   0.1    2.4  2  Fib_alpha        Fibrinogen alpha/beta chain family
        7.8    6.2  10.6         42    3.8   7.0    2.8  2  RPW8             Arabidopsis broad-spectrum mildew resistance


Domain annotation for each model (and alignments):
>> Snf7  Snf7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.0  20.2   5.8e-52   5.7e-49       3     172 ..      14     202 ..      12     203 .. 0.96

  Alignments for each domain:
  == domain 1  score: 166.0 bits;  conditional E-value: 5.8e-52
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT-...........HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        Snf7   3 irsLrkaerkldkkqeslekkikkleaelkklakkgn...........kdralllLKqkkryekqldqldnqlanleqvslaienlksnkevlnamkqg 90 
                  +sL++a+++ldk+++sle ki+kl+++l  +++k +           k+ra+++L+qkk+ye ql+ql++q++n+eq+++++e++k++++++++m+++
  EPX73693.1  14 APSLTDAIESLDKRSDSLEVKISKLDSQLSVFQQKLSntrpgpgqttiKQRAMNILRQKKMYEAQLQQLQQQSFNMEQAAMTTESMKNTMTTVQTMQDT 112
                 589********************************8889999999****************************************************** PP

                 HHHHHHHHHCTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTT-GGTTHHHHHHHHHHHHHHHHHCSH..........HHHHHHHTXXXST CS
        Snf7  91 akamkamnkkvdidkidklmdeiedqmekaeeisEalsrslddadeedEeeleaeLdaLeqelgdeell.........desvklpevPsee 172
                 a++mk+++k+++i+ki++l+d+i+d m+ a+e +E+l+++  +  ++dEeel+aeL+aL+qe     ++         ++s++lp++++ee
  EPX73693.1 113 ARQMKSQSKNISIEKIERLQDQIQDYMDTAGEFNEILGQNTAN-VDVDEEELDAELEALQQEASFGGDQlaqeqpsylQPSNELPNFVDEE 202
                 *****************************************76.9*****************8877766789999**********998875 PP

>> Prefoldin_2  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.0     5e-05     0.049      60      94 ..      17      51 ..       4      54 .. 0.71
   2 ?    4.3  12.0     0.037        37      10      97 ..      61     147 ..      59     152 .. 0.83
   3 ?    2.9   0.3       0.1     1e+02      70      91 ..     152     173 ..     140     186 .. 0.56

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 5e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Prefoldin_2 60 keevkeeLeerketlekeiktlekqleklekelee 94
                 +++++e L++r ++le +i++l +ql+  +++l++
   EPX73693.1 17 LTDAIESLDKRSDSLEVKISKLDSQLSVFQQKLSN 51
                 56667777777777777777777777777777665 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.037
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-TT--EEEEETTEEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Prefoldin_2  10 lqqqlqqlaqqikqletqlkelelvleelelldedtkvyklvGdvlvkqdkeevkeeLeerketlekeiktlekqleklekeleelke 97 
                  ++q+  ++  q+k++e+ql+ l++ + ++e+++ +t+ +k+   + v++ +++++++  ++k+   ++i++l++q+++   +  e+ e
   EPX73693.1  61 IKQRAMNILRQKKMYEAQLQQLQQQSFNMEQAAMTTESMKNTM-TTVQTMQDTARQMKSQSKNISIEKIERLQDQIQDYMDTAGEFNE 147
                  5778888888888888888888888888888888888888874.559999*************************9998777666655 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.1
                  HHHHHHHHHHHHHHHHHHHHHH CS
  Prefoldin_2  70 rketlekeiktlekqlekleke 91 
                  + ++++   ++l  +le l++e
   EPX73693.1 152 NTANVDVDEEELDAELEALQQE 173
                  4444444444444444444444 PP

>> DUF1319  Protein of unknown function (DUF1319)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.7   1.7   1.4e-05     0.013      42     101 ..      25      85 ..      13     106 .. 0.89
   2 ?    0.2   0.2      0.85   8.4e+02      38      51 ..     121     134 ..      90     172 .. 0.58

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1.4e-05
     DUF1319  42 kekrrslekqlkklkselkklrelylerrPl.skqeveelvveiskqPklieeealrltee 101
                   +  sle +++kl+s+l  +++++++ rP   +  +++  ++i +q k+ e + ++l ++
  EPX73693.1  25 DKRSDSLEVKISKLDSQLSVFQQKLSNTRPGpGQTTIKQRAMNILRQKKMYEAQLQQLQQQ 85 
                 556789************************7256789*****************9999875 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.85
     DUF1319  38 lkivkekrrslekq 51 
                   i +ek + l++q
  EPX73693.1 121 KNISIEKIERLQDQ 134
                 22222333333333 PP

>> mRNA_stabil  mRNA stabilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   2.4   3.7e-05     0.037       3      59 ..      80     135 ..      78     144 .. 0.92

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 3.7e-05
  mRNA_stabil   3 salskqdfdsakkllqsekeensldllksivdtlkqlpieeekevdvekwkklfdsa 59 
                  ++l++q f+  ++ ++ e++ n+++++++++dt++q++ ++ k++ +ek  +l d++
   EPX73693.1  80 QQLQQQSFNMEQAAMTTESMKNTMTTVQTMQDTARQMK-SQSKNISIEKIERLQDQI 135
                  78***********************************7.9********999887765 PP

>> Endotoxin_N  delta endotoxin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.0   0.00092      0.91      60      97 ..      30      68 ..      16      72 .. 0.84
   2 ?    5.1   4.5     0.017        17      38      96 ..      72     130 ..      67     147 .. 0.90

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00092
  Endotoxin_N 60 klkallkglslslkdfrkevknlkadPknaalks.avnv 97
                 +l+  +++l ++l +f+++ +n +  P + ++k+ a+n+
   EPX73693.1 30 SLEVKISKLDSQLSVFQQKLSNTRPGPGQTTIKQrAMNI 68
                 5778899**************************977776 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.017
  Endotoxin_N  38 vnsyrkeiqdlidnsltqyddnklkallkglslslkdfrkevknlkadPknaalksavn 96 
                   ++y  ++q+l ++s ++ +++ + +++k+  +++++ + + +++k + kn ++ +  +
   EPX73693.1  72 KKMYEAQLQQLQQQSFNMEQAAMTTESMKNTMTTVQTMQDTARQMKSQSKNISIEKIER 130
                  57899**********************************************99988554 PP

>> Remorin_C  Remorin, C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   7.8   0.00036      0.36      35      99 ..      70     136 ..      69     143 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00036
   Remorin_C  35 ekkakaeaelrkleeklEkkrakal..eklknklariekkAeekRasaeakrreeelktkekankir 99 
                 ++k+  ea+l++l+++  ++ ++a+  e +kn++++++   + +R++  ++++  + k+++  ++i+
  EPX73693.1  70 RQKKMYEAQLQQLQQQSFNMEQAAMttESMKNTMTTVQTMQDTARQMKSQSKNISIEKIERLQDQIQ 136
                 6999**********98776666554338999999999999999999999999988888887766665 PP

>> FlxA  FlxA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5  17.3   0.00011      0.11      10      91 ..      26     105 ..      18     120 .. 0.72
   2 ?   -1.6  11.7       2.8   2.8e+03       8      64 ..     117     173 ..     104     194 .. 0.56

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00011
        FlxA  10 ssssgsasqiasLqkQiknlqkqLkelsesdeltkeekkkqqqliqaQIqqlqaQIaqlqqqqaekaqekq.qsekeeksksk 91 
                 ++s++ + +i++L  Q++  q++L++      +t+   k+++  i  Q ++ +aQ++qlqqq  + +q +   +++++++  +
  EPX73693.1  26 KRSDSLEVKISKLDSQLSVFQQKLSNTRPGPGQTTI--KQRAMNILRQKKMYEAQLQQLQQQSFNMEQAAMtTESMKNTMT-T 105
                 57888999*********************9666666..6888889999999999999999997554443330333333332.2 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 2.8
        FlxA   8 ssssssgsasqiasLqkQiknlqkqLkelsesdeltkeekkkqqqliqaQIqqlqaQ 64 
                 +s+s++ s ++i++Lq Qi+++ +   e  e   + + +    ++++ a++++lq++
  EPX73693.1 117 KSQSKNISIEKIERLQDQIQDYMDTAGEFNEILGQNTANVDVDEEELDAELEALQQE 173
                 334444455677777777777766666655553333333445555555555555543 PP

>> Cytochrom_C  Cytochrome c
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   5.3    0.0083       8.3      16      74 ..       2      72 ..       2     206 .. 0.91

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0083
                 B-SSSBSSS....--HHHHHHHTTT-HHHHHHHHTTSS--SSSHHHHHHHGGGGGGG.............T CS
  Cytochrom_C 16 Hgvegggakqgggptlsgaaerasaasigasvanpaavsaprddfekkkltaempark............e 74
                 H++ g++++qg++p l++a+e  ++ s+   v+ ++ +s++ + ++k  +t   p +             +
   EPX73693.1  2 HRLFGKKQAQGNAPSLTDAIESLDKRSDSLEVKISKLDSQLSVFQQKLSNTRPGPGQTtikqramnilrqK 72
                 9999*************************************999999999888887766666666555553 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1  12.6   3.2e-05     0.032     157     280 ..      16     140 ..       7     144 .. 0.84
   2 ?    1.1   0.9      0.15   1.5e+02     151     203 ..     149     206 ..     141     210 .. 0.57

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 3.2e-05
        Spc7 157 lLekqeeeldellpeleeekaeleeeleklqeaaeelesid.keeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeae 254
                  L++  e ld+  ++le + ++l ++l   q++  +      ++ +++   ++ ++k+ +e++ ++l++   ++e+ + + e++k+ ++++++    a+
  EPX73693.1  16 SLTDAIESLDKRSDSLEVKISKLDSQLSVFQQKLSNTRPGPgQTTIKQRAMNILRQKKMYEAQLQQLQQQSFNMEQAAMTTESMKNTMTTVQTMQDTAR 114
                 56677777777777777777777777777777666655555699*****************9999********************************** PP

        Spc7 255 rvleeckgwsesevsrlkeevkalee 280
                 +++ + k++s + ++rl+++ ++  +
  EPX73693.1 115 QMKSQSKNISIEKIERLQDQIQDYMD 140
                 ********************998765 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.15
        Spc7 151 leedkelLekqeeeldellpeleeeka....eleeeleklqeaaeeles.idkeeLee 203
                 l +  ++++ +eeeld+ l++l++e +    +l +e  +  + ++el + +d+e+Le+
  EPX73693.1 149 LGQNTANVDVDEEELDAELEALQQEASfggdQLAQEQPSYLQPSNELPNfVDEEQLEA 206
                 4445555556666666666666666554444555555555555566665566666665 PP

>> Seryl_tRNA_N  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   4.0   0.00031      0.31      18      97 ..       9      86 ..       2      95 .. 0.88
   2 ?    0.6   7.9      0.65   6.5e+02      42     100 ..      62     123 ..      57     141 .. 0.67
   3 ?    2.9   6.4      0.13   1.3e+02      36     101 ..     104     171 ..      88     199 .. 0.69

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00031
                  HCCCTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCTTS-TCCCCCCCHHHHHHHHHHHHHHHHHHHHH CS
  Seryl_tRNA_N 18 lkkRgedkadvdelleldekrrelqveleelqaerNelskeIgkakkkkedaeeliaevkelkeelkaleaelkeleael 97
                  + + g+++++ d++ +ld++  +l+v++ +l ++    +++ ++    +   + +++++ ++  + k +ea+l++l+++ 
    EPX73693.1  9 Q-AQGNAPSLTDAIESLDKRSDSLEVKISKLDSQLSVFQQKLSNTRP-GPGQTTIKQRAMNILRQKKMYEAQLQQLQQQS 86
                  4.46689999*******************************999876.679999999999***************99875 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.65
                   HHHHHHHHHHHHHHHHHCCCCCCTT...S-TCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH CS
  Seryl_tRNA_N  42 qveleelqaerNelskeIgkakkkk...edaeeliaevkelkeelkaleaelkeleaelekl 100
                   ++++ ++ ++++   ++ +++ ++    e+a+   +++k+  + +++++++ ++++++ +++
    EPX73693.1  62 KQRAMNILRQKKMYEAQLQQLQQQSfnmEQAAMTTESMKNTMTTVQTMQDTARQMKSQSKNI 123
                   56666666777777777777777777767777777777777777777777777777666654 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.13
                   HHHHHHHHHHHHHHHHHHHHH.HHCCCCCCTTS-TCCCCCCCHH.HHHHHHHHHHHHHHHHHHHHHHH CS
  Seryl_tRNA_N  36 ekrrelqveleelqaerNels.keIgkakkkkedaeeliaevke.lkeelkaleaelkeleaelekll 101
                   +  +++q ++ +++++++++s ++I+++ ++ +d  +   e +e l++++++++ +++el+aele+l 
    EPX73693.1 104 TTVQTMQDTARQMKSQSKNISiEKIERLQDQIQDYMDTAGEFNEiLGQNTANVDVDEEELDAELEALQ 171
                   45556666666666666666634555555555555555555554257777888888888888887765 PP

>> BORCS8  BLOC-1-related complex sub-unit 8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1       2.2   2.2e+03      70      99 ..      19      48 ..       8      53 .. 0.66
   2 ?   11.2   7.4   0.00026      0.26      38     102 ..      62     126 ..      58     136 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 2.2
      BORCS8 70 savksikesessfeniqelLknsiflkqql 99
                 a+ s+++ ++s+e   + L + +++ qq+
  EPX73693.1 19 DAIESLDKRSDSLEVKISKLDSQLSVFQQK 48
                466677777777766666666666666654 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00026
      BORCS8  38 rkalPelvekkkevkeleeelqgacydveyaisavksikesessfeniqelLknsiflkqqlkae 102
                 ++   +++ +kk  +++ ++lq++++++e a  +  s+k++ ++++++q++ ++  +  ++++ e
  EPX73693.1  62 KQRAMNILRQKKMYEAQLQQLQQQSFNMEQAAMTTESMKNTMTTVQTMQDTARQMKSQSKNISIE 126
                 5555677778888888999******************************9988765555555555 PP

>> NPV_P10  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   1.8     0.083        82      13      36 ..      21      44 ..       8      96 .. 0.64
   2 ?    1.7   1.2      0.36   3.5e+02      23      56 ..      75     108 ..      59     112 .. 0.63
   3 ?    8.3   4.0    0.0031       3.1      13      67 ..      99     151 ..      94     174 .. 0.90
   4 ?   -0.1   0.1       1.3   1.3e+03      14      26 ..     161     173 ..     151     195 .. 0.65

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.083
     NPV_P10 13 ikavddkVdalqqqvddvqenlpd 36
                i+ +d++ d+l+ ++ +++++l  
  EPX73693.1 21 IESLDKRSDSLEVKISKLDSQLSV 44
                444444444444444444444333 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.36
     NPV_P10  23 lqqqvddvqenlpdvtelnekLdaqsaqLaelet 56 
                  ++q++++q+++ ++++     +++ +++++++t
  EPX73693.1  75 YEAQLQQLQQQSFNMEQAAMTTESMKNTMTTVQT 108
                 4567777777777766666666666666666655 PP

  == domain 3  score: 8.3 bits;  conditional E-value: 0.0031
     NPV_P10  13 ikavddkVdalqqqvddvqenlpdvtelnekLdaqsaqLaeletkvenIqdiLnp 67 
                  k++ + V+ +q+   ++++++++++   ek++++++q+++  ++  + ++iL +
  EPX73693.1  99 MKNTMTTVQTMQDTARQMKSQSKNIS--IEKIERLQDQIQDYMDTAGEFNEILGQ 151
                 6889999*****************99..89***********99999999999984 PP

  == domain 4  score: -0.1 bits;  conditional E-value: 1.3
     NPV_P10  14 kavddkVdalqqq 26 
                 +++d  ++alqq+
  EPX73693.1 161 EELDAELEALQQE 173
                 3445555555554 PP

>> Fmp27_WPPW  RNA pol II promoter Fmp27 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5  12.0   0.00041      0.41     174     267 ..      22     118 ..      11     146 .. 0.73
   2 ?    0.4   2.2      0.23   2.3e+02     174     227 ..     122     175 ..     108     189 .. 0.69

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00041
  Fmp27_WPPW 174 elleeRleeleeqiekleekleelelkseke.....deelkeeieelekeikelkeklefletlledlkeseesse..........eeeskskelsaas 257
                 e l++R ++le +i+kl+++l+  ++k +++     ++++k++  ++ ++ k+++ +l+ l++   ++++ ++++e          +            
  EPX73693.1  22 ESLDKRSDSLEVKISKLDSQLSVFQQKLSNTrpgpgQTTIKQRAMNILRQKKMYEAQLQQLQQQSFNMEQAAMTTEsmkntmttvqT------------ 108
                 6799***********************999999**999*************************999999999876644444433221............ PP

  Fmp27_WPPW 258 tsesfselde 267
                  +++ +++++
  EPX73693.1 109 MQDTARQMKS 118
                 2222222222 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.23
  Fmp27_WPPW 174 elleeRleeleeqiekleekleelelksekedeelkeeieelekeikelkekle 227
                 ++  e +e+l++qi++  ++ +e ++   +++++++ + eel  e++ l+++ +
  EPX73693.1 122 NISIEKIERLQDQIQDYMDTAGEFNEILGQNTANVDVDEEELDAELEALQQEAS 175
                 344466778888888888888888877777777777777777777777776655 PP

>> XhlA  Haemolysin XhlA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.2    0.0025       2.5       4      37 ..      19      52 ..      16      53 .. 0.88
   2 ?    0.6   0.1      0.65   6.5e+02      11      37 ..      70      96 ..      60      99 .. 0.73
   3 ?    5.8   2.4     0.016        16      12      47 ..      98     134 ..      91     136 .. 0.84
   4 ?    0.3   0.5      0.82   8.2e+02       6      26 ..     128     141 ..     125     173 .. 0.46

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0025
        XhlA  4 erlerietkldnleervdkleekaaeaeekiknl 37
                + +e ++++ d+le +++kl+   + +++k+ n+
  EPX73693.1 19 DAIESLDKRSDSLEVKISKLDSQLSVFQQKLSNT 52
                5689999999*************99999999886 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.65
        XhlA 11 tkldnleervdkleekaaeaeekiknl 37
                ++ +++e ++++l++ + ++e+ ++ +
  EPX73693.1 70 RQKKMYEAQLQQLQQQSFNMEQAAMTT 96
                555677779999999999999988766 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.016
        XhlA  12 kldnleervdkleekaaeaeekiknle.edlkklesn 47 
                   +n +++v++ ++ a+ +++++kn+  e++++l+++
  EPX73693.1  98 SMKNTMTTVQTMQDTARQMKSQSKNISiEKIERLQDQ 134
                 56888889*****************964888888876 PP

  == domain 4  score: 0.3 bits;  conditional E-value: 0.82
        XhlA   6 lerietkldnleervdkleek 26 
                 +er++ ++ ++++        
  EPX73693.1 128 IERLQDQIQDYMD-------T 141
                 3333333333333.......2 PP

>> GAS  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9  19.3     0.061        61      67     174 ..      69     176 ..       7     188 .. 0.57

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.061
         GAS  67 eeeveeLrkqlknyekdkqslknlkarlkelekelkdlkwehevleqrfekvekerdelykkfeaaiqevqqktglknllLekklkalqeelEkkeaql 165
                  ++++  ++ql++ +++   ++++ +  +++++ +++++  ++  +q  ++ ++   e  ++ ++ iq+++  +g  n +L +  ++++ + E+ +a+l
  EPX73693.1  69 LRQKKMYEAQLQQLQQQSFNMEQAAMTTESMKNTMTTVQTMQDTARQMKSQSKNISIEKIERLQDQIQDYMDTAGEFNEILGQNTANVDVDEEELDAEL 167
                 334444455555555555555555555555555555555555555555555555555555566666666666666666666666666666666666666 PP

         GAS 166 eevlaaanl 174
                 e++ ++a++
  EPX73693.1 168 EALQQEASF 176
                 666666665 PP

>> FapA  Flagellar Assembly Protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   9.3     0.003       2.9     333     424 ..      15     109 ..       7     127 .. 0.66
   2 ?    0.6   4.6      0.17   1.7e+02     341     407 ..     101     173 ..      90     185 .. 0.44

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.003
        FapA 333 pelkeklkeleeeleeleeeleklkkk....ikklpklkaekqlesekkeqlkklletkeklkeeleeleeelkelkeeleskkeeakikvnkeiy 424
                 p+l + ++ l+++  +le ++ kl+++     +kl++   ++  + ++k+   ++l++k+ ++ +l++l+++ +++++   + ++++++ ++ + +
  EPX73693.1  15 PSLTDAIESLDKRSDSLEVKISKLDSQlsvfQQKLSN-TRPGPGQTTIKQRAMNILRQKKMYEAQLQQLQQQSFNMEQAAMTTESMKNTMTTVQTM 109
                 6666666777777777777777777775553333444.3345567889999999999999*************98888777775555444444444 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.17
        FapA 341 eleeeleeleeeleklkkk.....ikklpklkaekqlesekkeqlkklletk.eklkeeleeleeelkelkee 407
                 +  + ++ +++  ++ k++     i+k++ l+ + q  ++   +++++l +   +   + eel++el++l++e
  EPX73693.1 101 NTMTTVQTMQDTARQMKSQsknisIEKIERLQDQIQDYMDTAGEFNEILGQNtANVDVDEEELDAELEALQQE 173
                 3333333343333333333222333333333223333444444444444444233334444555555555554 PP

>> Fib_alpha  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.1      0.04        39      71     113 ..       9      51 ..       5      54 .. 0.64
   2 ?    3.1  13.5       0.1     1e+02      26     107 ..      68     145 ..      60     175 .. 0.58

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.04
                 HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHH CS
   Fib_alpha  71 skkdndnvikksskeleeeilrlketidaqesnirvLqnvles 113
                 ++++n   +++  ++l+++   l+ +i++  s++ v q+ l++
  EPX73693.1   9 QAQGNAPSLTDAIESLDKRSDSLEVKISKLDSQLSVFQQKLSN 51 
                 5555566666666667777777777777777777777766655 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.1
                 CCCCCCCCCHHHCCCCCCCCCCCCHHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHH CS
   Fib_alpha  26 llkyekdvkkdlekleneleeisnstke...aeelvkeikdslrekqkskkdndnvikksskeleeeilrlketidaqesnirvL 107
                 +l+++k ++ +l++l+++  ++++   +   +++++++++++   + + k++++n+       +e +i+rl+++i++ + +  + 
  EPX73693.1  68 ILRQKKMYEAQLQQLQQQSFNMEQAAMTtesMKNTMTTVQTMQDTARQMKSQSKNIS------IE-KIERLQDQIQDYMDTAGEF 145
                 678999999999999998666655544400044444444444333333333333333......33.5555555555555544444 PP

>> RPW8  Arabidopsis broad-spectrum mildew resistance protein RPW8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   7.0     0.042        42      82     138 ..      60     117 ..      14     118 .. 0.68
   2 ?    1.9   0.2      0.17   1.7e+02      97     121 ..     125     149 ..     114     167 .. 0.59

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.042
        RPW8  82 csklkrynvlk.kyrYkkklkeLekslrkfvqvelqvqqvrdikellakmkelntkld 138
                   k + +n+l+ k +Y+ +l++L ++  ++ q  +  ++++++  ++++m+++ ++++
  EPX73693.1  60 TIKQRAMNILRqKKMYEAQLQQLQQQSFNMEQAAMTTESMKNTMTTVQTMQDTARQMK 117
                 345557777764889***********************************99988776 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.17
        RPW8  97 kkklkeLekslrkfvqvelqvqqvr 121
                   k++ L +++ +++++  + ++ +
  EPX73693.1 125 IEKIERLQDQIQDYMDTAGEFNEIL 149
                 4455555555555555555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      4284  (0.238942); expected 358.6 (0.02)
Passed bias filter:                     1038  (0.057895); expected 358.6 (0.02)
Passed Vit filter:                       121  (0.00674884); expected 17.9 (0.001)
Passed Fwd filter:                        33  (0.00184059); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.73u 0.30s 00:00:01.03 Elapsed: 00:00:00.43
# Mc/sec: 1473.34
//
Query:       EPX73694.1  [L=828]
Description: protein phosphatase regulatory subunit Ekc1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.3e-167  558.5   0.1   1.3e-167  558.5   0.1    2.8  3  SAPS      SIT4 phosphatase-associated protein


Domain annotation for each model (and alignments):
>> SAPS  SIT4 phosphatase-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.02   3.5e+02     109     130 ..      49      70 ..      35     101 .. 0.80
   2 !  558.5   0.1  7.2e-172  1.3e-167       1     489 []     141     645 ..     141     645 .. 0.86
   3 ?   -5.1  11.8      0.54   9.7e+03     249     327 ..     713     813 ..     668     824 .. 0.54

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.02
        SAPS 109 eLtreLvseeivekLikimlkg 130
                 +L+  L+++ei ++Li+++l+ 
  EPX73694.1  49 KLLDYLCKPEILSQLIDFILEV 70 
                 6999***************965 PP

  == domain 2  score: 558.5 bits;  conditional E-value: 7.2e-172
        SAPS   1 nenLldrkteemleFiksqenivekflkhidtpaimdlLlkiIstektesgtgiiewlksqdLisklldlLspeesediqssasdfLkaiItisanata 99 
                 ne++ld+ktee ++Fi+s en+v+k+l+h +t+aimdlLlk Is+++ +++ gi +wl+sq Li++ll lL+p  + d+qs+++d++kaiI+isan+++
  EPX73694.1 141 NEHFLDKKTEETVAFIQSIENFVDKILRHAETSAIMDLLLKFISMDRCNTTVGIADWLYSQGLIQSLLGLLDPYVDPDVQSTVADVIKAIIAISANSNE 239
                 89************************************************************************************************8 PP

        SAPS 100 nlqssigpneLtreLvseeivekLikimlkg...ksgsalvngvgiiielirknnsdydeenllytsleedppsmrdpiylghlLrlfsehlkdfqqll 195
                      igpn+L reLvs++++ +L+++m++     s+++l ngv+i+ielirknnsdyd  ++l++ l+++pp++rdpiylg +Lrlf+e+++ fqq+l
  EPX73694.1 240 P--GVIGPNSLSRELVSRRTITTLTDYMIDSkapYSSTSLINGVSIVIELIRKNNSDYDVTPVLQMPLDTNPPTTRDPIYLGSMLRLFAEKIPVFQQIL 336
                 7..8*************************997777788************************************************************* PP

        SAPS 196 lepkeks.klettlgekiepLGfeRfkiveLiaeLLhcsnmallnekkgeeivkerDevrerlleel...........tseeealedvsdeaskeesae 282
                  +p+++  +  t++g+ i+pLGfeRf+i+eL+aeLLhcsnm+ll+++++e +v +rD++r+ l +++           +         + ++s +++++
  EPX73694.1 337 MKPSSTPeQAATSFGT-IKPLGFERFRICELYAELLHCSNMSLLSDPNAEALVMQRDNLRDYLFRHNncarelnvsddE---------DADSSFTDKQA 425
                 **998766999*****.***********************************************998554333322211.........22233333344 PP

        SAPS 283 sedltdkdedvsleesksakd..............enkesdesesdtaeesseededdasseesalaeeteeklrkkpvvGDlLKiklvelkilptiLd 367
                 ++ ++ +  ++s++ ++ + +              +++++d se+++  + + e++ ++ s e+   e+  ++++k+pv+GD+LKik+ e++i+pt+Ld
  EPX73694.1 426 NDPMHGQIPQISKDYKDMSPEvggdspmedaepvpSEEYKDISETSKYIQPDLEETASNDSYEP-IPENVLDEMKKQPVIGDFLKIKFTENNIVPTVLD 523
                 4444444444444444444444444444555444322222222222222222222222222222.3445556677************************ PP

        SAPS 368 lFfkYpwNNfLHnvVydivqqilngkmdrgynrfLavdLfekaklterilegqkesdesqaek.kirlGYmGHltlIAeevvkfleryppellseeiee 465
                  Ff+YpwNNfLHnvVyd+vqq+lng+m++++n +La d+f  +k+te+i++gq+ sd++ +e+ ++r GYmGHlt IA+evvkf+e+y ++l s+e+++
  EPX73694.1 524 HFFEYPWNNFLHNVVYDVVQQVLNGPMEKEQNCALAFDMFLRGKITEKIIRGQEISDKATSEPnGFRPGYMGHLTIIADEVVKFIEHY-SHLFSPEVKK 621
                 **************************************************************99**********************88.99999***** PP

        SAPS 466 kleneeWeeyveetLeetrekena 489
                  + +e+W+ +v++tL+etr ++n+
  EPX73694.1 622 LIDDEKWQHFVNNTLAETRARDNQ 645
                 *********************995 PP

  == domain 3  score: -5.1 bits;  conditional E-value: 0.54
        SAPS 249 erDevrerlleel......tse........eealedvsdeaskeesaesedltdkdedvsleesksakd.........enkesdesesdtaeesseede 324
                 e+D +  +++++l      + +        +   +++sd++++e s++s++ +++d++v + +s+ +++         +++++des+s++++e++++d 
  EPX73694.1 713 EEDPLSREMSRRLsfdsanN-AqdnrdhfaQYMSQHISDNPPDEFSSSSDEDDEEDDEVVEWVSRGKDKkyprsnffiSSSDRDESDSEEDDENDSSDG 810
                 33333333333333322220.022222222333344447777777777777777777776666666666677766666455555555544444444444 PP

        SAPS 325 dda 327
                 + +
  EPX73694.1 811 ERE 813
                 433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (828 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       968  (0.0539907); expected 358.6 (0.02)
Passed bias filter:                      577  (0.0321825); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.77u 0.29s 00:00:01.06 Elapsed: 00:00:00.48
# Mc/sec: 5144.09
//
Query:       EPX73695.1  [L=330]
Description: tRNA dihydrouridine synthase Dus4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.8e-67  226.0   0.0    7.4e-67  225.6   0.0    1.0  1  Dus          Dihydrouridine synthase (Dus)
  ------ inclusion threshold ------
      0.044   13.1   0.0      0.068   12.5   0.0    1.2  1  TMP-TENI     Thiamine monophosphate synthase
      0.062   13.4   0.0       0.11   12.6   0.0    1.3  1  Resolvase    Resolvase, N terminal domain
       0.14   12.1   0.0       0.26   11.3   0.0    1.3  1  SelB-wing_1  Elongation factor SelB, winged helix
       0.18   11.5   0.1       0.37   10.4   0.1    1.5  1  DUF188       Uncharacterized BCR, YaiI/YqxD family COG1671


Domain annotation for each model (and alignments):
>> Dus  Dihydrouridine synthase (Dus)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  225.6   0.0   2.1e-70   7.4e-67       2     264 ..      29     292 ..      28     321 .. 0.92

  Alignments for each domain:
  == domain 1  score: 225.6 bits;  conditional E-value: 2.1e-70
                 E---TTTS-HHHHHHHHHTT-SSEEEEEEEE-SSS---HHHHHHH-GGGGGTSCEEEEEE-S-HHHHHHHHHHHHHTT-SCEEEEESSTTEEETTEEEG CS
         Dus   2 laPmagvtdlpfRelvrefgataLvvtemvtakaivreekvrirmlseeeeetplavQlggsdpallaeaAklvadlgadeIdlNvGCPskkvtrggaG 100
                  aPm+++++lpfR+lvr + ++ +v+t+m+ a++++++ k r+ ++s++e++t l++Q+g +dp  l +aA+l+ + ++d+I++N+GCP+  ++++g+G
  EPX73695.1  29 AAPMVRYSKLPFRQLVRDYQTD-IVYTPMILANEFLHP-KGRYFDFSTNERDTSLILQFGVEDPVILSKAAELAGP-YVDGIGINCGCPQSWAIHEGIG 124
                 58********************.***************.999**********************************.********************** PP

                 GGGGGSHHHHHHHHHHHHCCSSS-EEEEEESESSTTTC.HHHHHHHHHHCT-SEEEEESSECCCTT-CG--CHHHHHHHHH-SS-EEEESS--SHHHHH CS
         Dus 101 aaLlrkpdlvaqivkavvkaveiPvtvkirigiddeeenalelakiveaaGaqaltvHgRtraqnyegtadweaIkevkqavsipviaNGdIkdaedaq 199
                 +aLl++p+ v+q+++av+++++    v+ +i++ ++ +++ +l++++e+aGa++ltvHgRtr+++++ +++++aI+ev+  v+ipv+aNGd+ ++++  
  EPX73695.1 125 SALLKEPERVYQLIRAVKDKLGEDFCVEAKIRVSKNLDETRHLMQTIERAGADFLTVHGRTRQDRSSFPVNLDAIREVRSCVNIPVVANGDVNSLREGY 223
                 **********************99999999999999*************************************************************** PP

                 HHHHHH--SEEEESCHHCCSTTHHHHHHHHHHSC------HHHH....HHHHHHHHHHCHHTTCCCCCC CS
         Dus 200 aileetGadgvmigrgalgnPwlfaestavktgeaepapplaee....aeiveehlkkleeelgedkgl 264
                 +i + t  dgvm +rg l+nP+lfa  +   +g+ e+  +  +     ++++ +hl  +  ++  ++  
  EPX73695.1 224 EIAKFTNTDGVMSARGLLENPALFAGFEDTPWGCVERFVSYSTAyslnFQLFYHHLITMMGKMTTKRER 292
                 **************************88*********99955445777888888877777666655544 PP

>> TMP-TENI  Thiamine monophosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.9e-05     0.068     108     160 ..     164     217 ..     144     225 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.9e-05
    TMP-TENI 108 e...aeeaealgadYigvGpifpTdtKkda..eplgleglkelaealeiPvvaiGGit 160
                     ++++e++gad+++v    +  t++d+   p++l+ ++e+++ ++iPvva G+++
  EPX73695.1 164 TrhlMQTIERAGADFLTV----HGRTRQDRssFPVNLDAIREVRSCVNIPVVANGDVN 217
                 234589999999999987....44555555558**********************998 PP

>> Resolvase  Resolvase, N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0     3e-05      0.11      45     106 ..     126     185 ..     111     201 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 3e-05
                 TT-TT-HHHHHHHHHHTT-EE.EEEESSCCCC-S...S-HHHHHHHHHTT-EEEESS..SS- CS
   Resolvase  45 GakleRpglkrllaalregkgdvlvvekldRLaRsvrdlltlleelrekgvslvsldegidt 106
                 +  +e +   +l++a++++ g+  +ve   R + ++ +  +l+++++++g+++ ++     t
  EPX73695.1 126 ALLKEPERVYQLIRAVKDKLGEDFCVEAKIRVSKNLDETRHLMQTIERAGADFLTVHGR--T 185
                 555555667799******99*99********************************9952..2 PP

>> SelB-wing_1  Elongation factor SelB, winged helix
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   7.1e-05      0.26       9      45 ..     136     175 ..     130     182 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 7.1e-05
  SelB-wing_1   9 qvvrehreGL..dW.qeaaaraaLsleetrkLLqdmaaaG 45 
                  q++r  ++ L  d+  ea  r +  l+etr L+q +  aG
   EPX73695.1 136 QLIRAVKDKLgeDFcVEAKIRVSKNLDETRHLMQTIERAG 175
                  6666666644225525999***************998888 PP

>> DUF188  Uncharacterized BCR, YaiI/YqxD family COG1671
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.1    0.0001      0.37      91     127 ..     163     199 ..     152     201 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.0001
      DUF188  91 amRdlmkklRragertggpkkfskedrsrFakaLdrl 127
                 ++R+lm+++ rag +  + + ++++drs+F  +Ld +
  EPX73695.1 163 ETRHLMQTIERAGADFLTVHGRTRQDRSSFPVNLDAI 199
                 68******************************99975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       478  (0.0266607); expected 358.6 (0.02)
Passed bias filter:                      471  (0.0262703); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.54u 0.29s 00:00:00.83 Elapsed: 00:00:00.47
# Mc/sec: 2109.66
//
Query:       EPX73696.1  [L=480]
Description: CMGC/DYRK/PRP4 protein kinase Prp4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.2e-53  180.1   0.3    7.3e-53  179.6   0.3    1.2  1  Pkinase      Protein kinase domain
    6.7e-23   81.3   0.1    3.5e-22   78.9   0.1    1.9  2  Pkinase_Tyr  Protein tyrosine kinase
      0.003   17.2   1.0      0.023   14.3   1.0    2.3  1  RIO1         RIO1 family
  ------ inclusion threshold ------
       0.18   11.7   0.0       0.31   10.9   0.0    1.4  1  APH          Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  179.6   0.3   1.6e-56   7.3e-53       3     264 .]     160     473 ..     158     473 .. 0.92

  Alignments for each domain:
  == domain 1  score: 179.6 bits;  conditional E-value: 1.6e-56
                 EEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS......CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHH...HH CS
     Pkinase   3 kleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklk......hpnivrlyevfeekdelylvleyveggeladlle...rk 92 
                 ++++lG+G f++V+++++++t+  +A+K+i++++   k     ++E++il++l+       ++i+r+ ++f +k++l++v+e+++ + l d+l+   r+
  EPX73696.1 160 VQSNLGKGMFSSVVNVLDQKTKASFAIKIIRNNEVMYKA---GMKELSILERLQaadpegRRHIIRYDRYFMHKNHLCMVFEMLSLN-LRDILKkfgRN 254
                 6789***************************99887755...69*********9876666789**********************66.99999999899 PP

                 SS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTE.EEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHH CS
     Pkinase  93 gslseeeakkiakqilegleylHskgiiHrDlKpeNiLidekge.lKitDFGlakelessskltsfvgtseYlAPEvlkeneyskkvDvWslGvilyel 190
                 + l+ + ++ +a+q++++l+ l + +iiH D+Kp+N+L++ek++ lKi+D+G a+ + +++  t + +++ Y+APE++ + +ys ++D Ws+G+ l+el
  EPX73696.1 255 VGLNIKAIQVYAYQMFTALQLLEECNIIHADIKPDNMLVNEKRNiLKICDLGSASDAAENE-ITPYLVSRFYRAPEIILGYPYSCPIDTWSVGCSLFEL 352
                 99**************************************77777**************98.************************************* PP

                 HHSS-STTTSSHHHHHHHHHHT.HHHHHHHCTSHH...HHHTTS..............................................-HHHHHHHH CS
     Pkinase 191 ltgkppfsgekgkekvekeldq.lekilkilgetkeklpeasei..............................................seeakdllk 242
                 ++g+ +f+g+++++  + +++   + + k+l+ +++++++ +e                                               ++ ++ ll+
  EPX73696.1 353 YAGQILFPGRSNNQMLKLMMECkGKFSHKMLKRSQFAFDNFDENfnfinkeidhisgqethrilnfnkpardikfrlkdvvastneevviQQVFILLLE 451
                 ********9999987777777655666778887778777777767999999************************************************ PP

                 HHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 243 kllkkdpkkRltaeellqhpyl 264
                 ++l+ +p+kR+t +++l+hp++
  EPX73696.1 452 QCLELNPEKRITPKQALKHPFF 473
                 *********************8 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.9   0.1   7.8e-26   3.5e-22       4     219 ..     161     372 ..     159     387 .. 0.86
   2 ?   -0.4   0.0      0.12   5.6e+02     235     254 ..     447     466 ..     422     470 .. 0.75

  Alignments for each domain:
  == domain 1  score: 78.9 bits;  conditional E-value: 7.8e-26
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-......BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHT CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklk......hpnivkllgvctkeepllivteyvkgGdLlkfLrkk 95 
                  +++lG+G f++Vv+   +    k++ + a+K+++++      ++ ++e++i+++l+       ++i+++    +++++l++v+e+++  +L++ L+k 
   EPX73696.1 161 QSNLGKGMFSSVVNVLDQ----KTKASFAIKIIRNNEVM--YKAGMKELSILERLQaadpegRRHIIRYDRYFMHKNHLCMVFEMLSL-NLRDILKKF 251
                  679**********98777....999********665554..5899*******9996233333469*******************9988.799999987 PP

                  .CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETT.EEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHH CS
  Pkinase_Tyr  96 .ekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenk.vvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsf 191
                   ++  l++k +  +a+q+  +++ Le+ +++H d+   N+L++e++ + ki+D G a+d       ++ +   ++  + apE++    ++   D Ws 
   EPX73696.1 252 gRNVGLNIKAIQVYAYQMFTALQLLEECNIIHADIKPDNMLVNEKRnILKICDLGSASDA----AENEITPYLVSRFYRAPEIILGYPYSCPIDTWSV 345
                  234678999999******************************9965489********999....344456677888999******************* PP

                  HHHHHHHHTTSSGTTTTSHHHHHHHHHH CS
  Pkinase_Tyr 192 GvllwEiftlgespypglkneevleklk 219
                  G  l+E++  g+  +pg +n+++l+ + 
   EPX73696.1 346 GCSLFELYA-GQILFPGRSNNQMLKLMM 372
                  ********9.************999874 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.12
                  HHHHHHHT-SSGGGS--HHH CS
  Pkinase_Tyr 235 yelmkkcweedpeeRptfse 254
                    l+++c+e +pe+R t ++
   EPX73696.1 447 ILLLEQCLELNPEKRITPKQ 466
                  44689**********98665 PP

>> RIO1  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   1.0   5.2e-06     0.023      49     159 ..     193     315 ..     162     322 .. 0.60

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 5.2e-06
                 HHHHHHHHHHHHHHHHHHHTT.......--S--EEEEETT.EEEEE--E.ETTEEGGBHHHCG.-HHHHHHHHHHHHHHHHHHHHTSTEEESS-STTSE CS
        RIO1  49 klvklwaekEfrnLkrleeag.......vpvPkpielkrh.vlvmefig.edgvaapklkdve.eeeeaeelyeevleemrklykeaglvHaDLSeyNv 137
                 +++  +  kE ++L+rl++a+       ++  +   +k+h ++v e+++ +    ++k       + +a ++y+  + +  +l++e++++HaD+   N+
  EPX73696.1 193 EVMYKAGMKELSILERLQAADpegrrhiIRYDRYFMHKNHlCMVFEMLSlNLRDILKKFGRNVgLNIKAIQVYAYQMFTALQLLEECNIIHADIKPDNM 291
                 5555566666666666666542212222233333333333344555555322333333333332366777888888888999***************** PP

                 EEETT.E.EEE--GTTEEETTSTT CS
        RIO1 138 lvded.k.vviIDvsQaveldhpn 159
                 lv+e+ + + i D++ a ++++++
  EPX73696.1 292 LVNEKrNiLKICDLGSASDAAENE 315
                 **9996414466777776666655 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   6.9e-05      0.31     104     185 ..     208     297 ..     189     311 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 6.9e-05
                 CHHCH.-STTTB-SHHCHTCCHHHHHHCHHH.CCCGCCTCCHHHHHHHH...........HHHHHHHH--SSS-EEEE-SS-SGGGEEEC..TT CS
         APH 104 alhqvdpaalpladflaqdlellrqlesata.rllaselldlleeleeq...........vlaalaallpgelptvllHgDlhpgNllvdpddg 185
                 +l+++dp+  + +++ + d+++  + +  +    l ++l+d l ++ ++           +++++ al +  ++  ++H D++p+N+lv+ ++ 
  EPX73696.1 208 RLQAADPE--GRRHIIRYDRYFMHKNHLCMVfEMLSLNLRDILKKFGRNvglnikaiqvyAYQMFTALQL-LEECNIIHADIKPDNMLVN-EKR 297
                 55555444..555666666666666666666666666666655555555777777777778888888888.4777899************.444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (480 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       786  (0.0438396); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.65u 0.36s 00:00:01.01 Elapsed: 00:00:00.54
# Mc/sec: 2675.22
//
Query:       EPX73697.1  [L=835]
Description: retromer complex subunit Vps35 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.8e-247  823.6  20.9     2e-247  823.4  20.9    1.0  1  Vps35     Vacuolar protein sorting-associated protein 35


Domain annotation for each model (and alignments):
>> Vps35  Vacuolar protein sorting-associated protein 35
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  823.4  20.9  1.1e-251    2e-247       2     730 .]      15     773 ..      14     773 .. 0.97

  Alignments for each domain:
  == domain 1  score: 823.4 bits;  conditional E-value: 1.1e-251
       Vps35   2 LeealavvkeqsflmkraleedklmdaLkhasnmlseLrtssLsPkqYYeLYmavfdeLrhLssyLkdehkkkkkkladLYelVQyagnivpRLYLlit 100
                 Lee+l  +k++s lm+++l+++klmda++++s  l e+r+++LsPkqYYeLYm  +++Lr L + L ++h +++++l+dLYelVQyag+++pRLYL+it
  EPX73697.1  15 LEESLVICKQSSRLMQKNLQTGKLMDAFRNCSISLVEMRNNDLSPKQYYELYMYTTETLRRLGDALLETHLNGTHHLMDLYELVQYAGSVLPRLYLMIT 113
                 899************************************************************************************************ PP

       Vps35 101 vGtvyikskdapakeilkDlvEmcrGvQhPiRGLFLRyYLsqmtkdlLpdteseeee..eegelkdsieflltNFiEmnkLWvRlqhqghsrerekrek 197
                 vG++y+++++a +kei++Dl++mc GvQhP+RGLFLR+YL+++t++ Lp++ ++++   ++g+l ds+ fll NF+EmnkLWvR+qh g+ ++  +r++
  EPX73697.1 114 VGSAYLETPKALVKEIMNDLIDMCAGVQHPLRGLFLRHYLLTQTRKGLPQDPDHDNAdpTKGTLMDSVRFLLLNFTEMNKLWVRIQHLGPMKDYVRRTQ 212
                 **************************************************9877776889*************************************** PP

       Vps35 198 eRkeLkiLVGsnLvrLsqLegvdlelYkekiLpkileqivqcrDvlaQeYLldviiqvFpdefhlatLdkllsailklnpkvnikeilisLidRLakya 296
                 eR+eLk+LVG nLvrLsqL + +l++Yk++iLp+i+eqi++crD+laQeYL +v++qvFpde+hl+tLd+++++i+kln+ v+++ ++i +++RL++y+
  EPX73697.1 213 ERNELKVLVGLNLVRLSQL-NFNLDTYKNEILPAIVEQIIECRDPLAQEYLSEVVCQVFPDEMHLETLDIYFNTIMKLNRGVKLTPLVICMVNRLTAYV 310
                 *******************.89***************************************************************************** PP

       Vps35 297 er..................................ekksevpedvdlfevfweqleelvearpdlsledilallesllnlslklypdnlenvdkvlel 361
                 +r                                    ++ ++ +  + ev+w+++ ++++ar+ + l di+++l+s+ln+ l++yp ++++ d+v++l
  EPX73697.1 311 QReceaeasdregsvnqtmqnlsledqssgfenkicPGDKVISPSLAIQEVLWTYIVDVINARNGIALGDIVQILSSILNFFLQCYPYQTQYADRVFQL 409
                 *******************************99887444566669****************************************************** PP

       Vps35 362 aaeklkevel..eeleskeaeeellkLLlapikslksvltvlklenykellsllsyktrkkvaleivdaileeketkietleevekllellsvlikdek 458
                 ++e++ ++ +  +el++k+ +++l ++L++pi s+ s++ +l+l+n+ +++++++++ r ++a  i+d+i+e ke+ i++l++v++l+ ++sv+ik++ 
  EPX73697.1 410 INERILQQASfqTELKEKSLQKSLYSILVLPIVSFPSFSYCLNLPNFLPVFRAQPNNIRYDIAKLILDKIIE-KEQLISDLKDVQELFGVISVIIKNN- 506
                 **99887666788999999****************************************************9.57*********************43. PP

       Vps35 459 dkeeeefaeeqelvaklvhliknddldkqfklllllrkkllkggekrikytlpalitallklarklkklkkkekekkekleekvkklfkfihqliselv 557
                     +++ e+ +++a lvh++ n+d++ q+++l  l++++ ++ge ++ky+lp ++++++ lar+++  k        +++ekv+ l+ f++ +i  l+
  EPX73697.1 507 ---GNDTVEDLKTIAILVHYLYNEDPQVQIEILRCLKDNFVQAGE-NVKYLLPVVVNKCIFLAREFRLFK------CVDWAEKVRVLWDFVNACIVILY 595
                 ...34689***********************************99.********************7766......457******************** PP

       Vps35 558 skaeaaelalklflqaalvadqleleeiayefftqaftiYeesisdskaqlqaivliigtLqktrslseenyetLitkltlhaskLlkkkdqcravllc 656
                 ++ ++ael+l l+l aa++ad  ++ ++ayefftqaftiYees  ds+ q+q +++i+g+Lqktr++s ++y+tLitk+tl+askLlkk+dqcr +l +
  EPX73697.1 596 NHGDSAELSLVLYLFAAEMADIENYPDFAYEFFTQAFTIYEESALDSRLQYQQLLMITGKLQKTRNFSVDDYDTLITKCTLYASKLLKKPDQCRGILHA 694
                 ****99********************************************************************************************* PP

       Vps35 657 shLfwe.e....eekyrdgkrvleCLqkslriAdsimdnavslelfveiLnkylyyfekgneevtekyingLieliken 730
                 shL+w+ e    +  +rd+krvleCLqksl+iAds+md+++sl+lf++iL++y+yy++++++++ +k+i gLi+l ++n
  EPX73697.1 695 SHLWWQnEtteeTVIFRDPKRVLECLQKSLKIADSCMDQITSLKLFINILEQYFYYYDQRCDSILAKHIGGLIDLTEQN 773
                 *****43356667799**********************************************************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (835 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       700  (0.0390429); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.76u 0.28s 00:00:01.04 Elapsed: 00:00:00.52
# Mc/sec: 4859.52
//
Query:       EPX73698.1  [L=236]
Description: thioredoxin family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.1e-05   25.3   0.0    1.7e-05   24.8   0.0    1.3  1  Thioredoxin  Thioredoxin


Domain annotation for each model (and alignments):
>> Thioredoxin  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.0   9.4e-10   1.7e-05       3      83 ..      61     142 ..      59     160 .. 0.93

  Alignments for each domain:
  == domain 1  score: 24.8 bits;  conditional E-value: 9.4e-10
                  EESSHHHHHHHHTTTSSEEEEEEE-TTSHHHHCHHHHHHHHHHHCTT...TSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTE CS
  Thioredoxin   3 lvltkenFeeevakekklvlveFyApwCghCkalaPeleklaeelkd...kvklakvdvdenedlakkyevegiPtlklfkngk 83 
                   +lt++n+++ ++   +++l++ + + C+ C + + ++++l++++k+   +v++ +v ++ n++la ++ ve +P  +++  ++
   EPX73698.1  61 NNLTDKNWDSSIKT--NEWLIQITIDPCTLCHKEEYMFNDLSHQMKEnypNVQFGRVYINGNPELAVRLLVEKLPVYYFISGNN 142
                  6799*********9..99**********************************************************99998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (236 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       659  (0.0367561); expected 358.6 (0.02)
Passed bias filter:                      481  (0.026828); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 1650.03
//
Query:       EPX73699.1  [L=129]
Description: hypothetical protein SOCG_02917 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
      0.022   15.1   0.1      0.032   14.5   0.1    1.3  1  Glu-tRNAGln  Glu-tRNAGln amidotransferase C subunit


Domain annotation for each model (and alignments):
>> Glu-tRNAGln  Glu-tRNAGln amidotransferase C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.1   1.8e-06     0.032       2      55 ..      42     107 ..      41     113 .. 0.68

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 1.8e-06
                  -HHHHHHHHHHHHHHHHHHTTCGCS--TT----S.....-EB-S--...........HHHHHTT-SSE CS
  Glu-tRNAGln   2 seeEleklakelnsildyveqLqevdttgveplthp...vlReDev...........reelLknApet 55 
                  s++E+e ++++ln+ ++ + ++++ dt++++  +h    +   D++             ++++n + +
   EPX73699.1  42 SDAEKENMLNKLNEGIGRMHAMEQADTSHIDHPFHTlsfP--VDVEelntpteenqtNWDVFRNSKMS 107
                  799************************9998666667552..46433555544443222235555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       511  (0.0285013); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.47
# Mc/sec: 831.87
//
Query:       EPX73700.1  [L=178]
Description: NEDD8-conjugating enzyme Ubc12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.5e-38  129.3   0.0      9e-38  129.1   0.0    1.1  1  UQ_con    Ubiquitin-conjugating enzyme
  ------ inclusion threshold ------
      0.055   13.3   0.2        0.1   12.4   0.2    1.5  1  UEV       UEV domain


Domain annotation for each model (and alignments):
>> UQ_con  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.1   0.0     1e-41     9e-38       1     138 [.      27     160 ..      27     162 .. 0.91

  Alignments for each domain:
  == domain 1  score: 129.1 bits;  conditional E-value: 1e-41
                 HHHHHHHHHHHSTTTTEEEEEEETTEECEEEEEEEB.TTSTTTTEEEEEEEE--TTTTTS--EEEESST-SCTTBETTSBB-CGGGSTTT--TTSHHHH CS
      UQ_con   1 rlqkelkelakkkpsgisaklvddenlfewkvlikgpedtpYeggvFklelefpedYPlkpPkvkfvtkifHPnvdksGevcldiLkeekWspaltles 99 
                 r+qk+++el  + ps +s++  d ++l e+ + i + ++++Y gg F+++++++++YP++pPkv++ +ki+HPn+d++G+vcl+iL++e W+p+l+l+s
  EPX73700.1  27 RIQKDISEL--DVPSTMSTSWPDVTKLHELLLEIRP-DEGYYYGGKFQFSIHIDSNYPHDPPKVRCLNKIYHPNIDTQGNVCLNILRQE-WNPVLNLNS 121
                 688888875..4555555555554699***9**998.**************************************************66.********* PP

                 HHHHHHHHHHS--TTS-SSHHHHHHHHHTHHHHHHHHHH CS
      UQ_con 100 vllsiqsLlaepnpesplnkeaakllkkdreeykkkvke 138
                 +l+ +q L+  pn e+plnkeaa++l++d++ + ++vk+
  EPX73700.1 122 ILVGLQFLFLAPNAEDPLNKEAAADLRNDPRGFGARVKT 160
                 *********************************999986 PP

>> UEV  UEV domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.2   1.2e-05       0.1      53     111 ..      73     126 ..      62     139 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.2e-05
                 EEE--TTTTTS--EEEE-GCC--TSGGGGGB-TTSBB--HHHH.S--TTT--HHHHHHHH CS
         UEV  53 liwvlesyPveaPivyvkptksmvikknenvdaqGlvylpyLe.eWkreksnlvslvqel 111
                  i + ++yP  +P v    +    i  + n+d+qG+v l++L+ eW++   nl s++  l
  EPX73700.1  73 SIHIDSNYPHDPPKVRCLNK----I-YHPNIDTQGNVCLNILRqEWNP-VLNLNSILVGL 126
                 67888999999997654332....2.3559************725877.67776665444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (178 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       283  (0.0157845); expected 358.6 (0.02)
Passed bias filter:                      271  (0.0151152); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 1285.16
//
Query:       EPX73701.1  [L=441]
Description: acetylornithine aminotransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.6e-109  366.2   0.0     2e-109  366.0   0.0    1.0  1  Aminotran_3      Aminotransferase class-III
     0.0044   16.4   0.0     0.0075   15.6   0.0    1.3  1  DegT_DnrJ_EryC1  DegT/DnrJ/EryC1/StrS aminotransferase family
  ------ inclusion threshold ------
      0.011   14.7   0.0       0.02   13.9   0.0    1.3  1  Aminotran_5      Aminotransferase class-V


Domain annotation for each model (and alignments):
>> Aminotran_3  Aminotransferase class-III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  366.0   0.0  3.3e-113    2e-109      10     406 .]      55     436 ..      49     436 .. 0.97

  Alignments for each domain:
  == domain 1  score: 366.0 bits;  conditional E-value: 3.3e-113
                  CEEEEEEEBTEEEETTS-EEEESSHHHHTTTT-BT-HHHHHHHHHHHTT-S---TTTCEEHHHHHHHHHHHHHCT-..S.....EEEEESSHHHHHHH CS
  Aminotran_3  10 llvitkaeGvyltdvdgkrylDlvssiavvnlGhahPkvvkavkeqaaklshvsfgaltnepalklaekllklapkgld.....kvflansGseAvet 102
                  +lv++ ++G+yl d++g++y+D++s+ av+ lGh hP+v+ ++++q  kl+h s +++ nepa++l+ k++k ++++       k+f+ nsG+eA+et
   EPX73701.1  55 PLVMSHGQGSYLFDKEGRKYIDFTSGVAVTSLGHGHPEVARLAADQCTKLVHSS-NLYYNEPAIELSSKINKSLAQNSKisspsKIFFSNSGTEANET 151
                  58999*************************************************.***************88888755466777************** PP

                  HHHHHHHHHHHTSHCTT-EEEEETTT---SSHHHHHHSS--TTTTTTCTTB-TSEEEE-TTBGGGTB-HHHHHHHHHHHHHHHHCHTCCCEEEEEE-S CS
  Aminotran_3 103 AlKlarkyarekkatektkiiafkgafHGrtlgalsvtgskkkyktlfgpflpevvrlkypdeevlkeneeeeaalleelealekkkkdevaAvivEp 200
                  AlK+ark a+e   + k++i+ f+++fHGr lg+ls+t++ +ky+++f+p+lp+vv++ y+d                 +e+++++++d++aAvivEp
   EPX73701.1 152 ALKFARKAAYEGYGEGKSQIVYFNNSFHGRSLGSLSITAN-PKYRRGFEPLLPDVVQATYND-----------------IESIKQVINDKTAAVIVEP 231
                  **********999***************************.********************9.................99999************** PP

                  CETTTTSEB--CCHHHHHHHHHHHHT-EEEEE-TTTTTTTTSSSSGGGGC..TS--SEEEE-GGGGTTSS-EEEEEEHHHHTTS-TTSB--TTTT-HH CS
  Aminotran_3 201 iqgegGvvvaspeflaklrelckkhdvllivDEvqtGfGrTGklfAleha..gvspDlmtlaKaltgGlplsavlataevmqalapgshgsTfgGnpl 296
                  +qgegG+ +a++efl +lr+ c+k +v li DE+q+G+Gr+G+++A+  +  + spD++t+aK l++Glp+sa+++  +v+++l+ g+hgsTfgGnp+
   EPX73701.1 232 VQGEGGICPANAEFLVALRKACDKFNVSLIYDEIQCGLGRSGDFWAHSIVkdQASPDIITIAKPLANGLPISATIVSSKVAETLHAGEHGSTFGGNPV 329
                  ************************************************988899******************************************** PP

                  HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTT-.TTEEEEEEETTEEEEEEBCCCETTCHHHHHHHHHCTEE-EEETTTEEEE---TT--HH CS
  Aminotran_3 297 acavalavleiieeekllenaqelgaalkegLeelqkky.evikevRgkGlmiaielkeeaevkekeilkkakekGvlilsaGdnvirllppliitde 393
                  ac+v    ++ +  +k l+n+++  + l+++  e+  ky + i+ + g+Gl++++ + ++      e+++ a+++G+l+l+ G+n  r+lp+l ++d 
   EPX73701.1 330 ACRVGSFCVDELSSSKILNNVRKQHNTLTSRFAEFTTKYpNLIRGYAGRGLLLGLQFNQSPS----EFINLARKQGLLLLPGGNNNTRVLPSLNVKDS 423
                  ***************************************9***************9999999....8******************************* PP

                  HHHHHHHHHHHHH CS
  Aminotran_3 394 eidelleilkkal 406
                   i+++l+i+ ++l
   EPX73701.1 424 VIADGLDIMDDTL 436
                  *********9986 PP

>> DegT_DnrJ_EryC1  DegT/DnrJ/EryC1/StrS aminotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   1.3e-06    0.0075      45     144 ..     143     263 ..     139     268 .. 0.70

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 1.3e-06
                      SSHHHHHHHHHHH......TTTTTT-.EEEEESSS-TH........HHHHHHHTT-EEEEE-B-TTTSSB-GGGCGGG--TTEEEEE..EB-GG CS
  DegT_DnrJ_EryC1  45 ssGtaAlhlaLra......lgvgpgd.eVIvpsltFva........tanavlelgakpvfvDvdpdtynidpaaieaaitertkaIl..pVhly 121
                      +sGt+A++ aL+        g g+g+ +++   ++F +        tan+  + g +p + Dv ++tyn d ++i+++i+ +t+a++  pV   
       EPX73701.1 143 NSGTEANETALKFarkaayEGYGEGKsQIVYFNNSFHGrslgslsiTANPKYRRGFEPLLPDVVQATYN-DIESIKQVINDKTAAVIvePVQGE 235
                      5666666666665444444333444314445566665444444444999999****************9.***************994456666 PP

                      GB---.....HHHHHHHHHHCT-EEEEE CS
  DegT_DnrJ_EryC1 122 Gqvad.....mdalkaiaakhglkvieD 144
                      G ++      + al++ ++k ++ +i D
       EPX73701.1 236 GGICPanaefLVALRKACDKFNVSLIYD 263
                      6666422334567889999999999887 PP

>> Aminotran_5  Aminotransferase class-V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   3.3e-06      0.02      29     162 ..     104     246 ..      92     271 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 3.3e-06
                  SSSSSSSHHHHHHHHHHHHHHHHHHHHHT-STGGGEEEESSHHHHHHHHHHHCCCC.....-TTTSEEEEETTSHGGGTHHHHHHHH....HHTEEEE CS
  Aminotran_5  29 nvhrsvhhlgkeatkaveearekvaelinaeseeeiiftsGtteainlvalslars.....lkpgdeivvteaehhanlvpwqelak....rtgakvk 117
                   vh+s   +++ a++   ++ + +a+  +++s ++i f  ++tea++++++ ++++      + + +iv+ ++  h+  +    +      r+g++  
   EPX73701.1 104 LVHSSNLYYNEPAIELSSKINKSLAQNSKISSPSKIFFSNSGTEANETALKFARKAayegyGEGKSQIVYFNNSFHGRSLGSLSITAnpkyRRGFEPL 201
                  688888889999999999******************************9887776666575566789*********9988777766511115555555 PP

                  EEEBETTSCBEGGGHHHH--TTEEEEEEESBETTTTEB--HHHHH CS
  Aminotran_5 118 vipldeegeldldelekllnektklvaithvsnvtGtiqpveeig 162
                     + +    d++ +++ +n+kt++v++  v+ + G++   +e+ 
   EPX73701.1 202 LPDVVQATYNDIESIKQVINDKTAAVIVEPVQGEGGICPANAEFL 246
                  55666666667*********************9999976655554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (441 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       326  (0.0181828); expected 358.6 (0.02)
Passed bias filter:                      311  (0.0173462); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.44
# Mc/sec: 2993.06
//
Query:       EPX73702.1  [L=431]
Description: TORC2 subunit Bit61 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-36  126.2   0.9    1.2e-36  126.2   0.9    2.2  2  HbrB      HbrB-like


Domain annotation for each model (and alignments):
>> HbrB  HbrB-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.5     0.047   8.5e+02     101     131 ..      91     121 ..      79     156 .. 0.42
   2 !  126.2   0.9   6.8e-41   1.2e-36       1     168 [.     220     372 ..     220     373 .. 0.92

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.047
        HbrB 101 fLPLetefklssllaeskekr........saspasqass 131
                 +L +e + + ++  ++s +++        +        +
  EPX73702.1  91 MLAMEDKHWTKQNSKKSGKTKplsvnqhsN--------N 121
                 344444444444444333333322222110........1 PP

  == domain 2  score: 126.2 bits;  conditional E-value: 6.8e-41
        HbrB   1 lladdaWqllcvrvlplFngedlrvpiEdlnklvelhiqlvierakalsllvedleeLlstglltLenkLsqleeerllkrLveiWkffytqvlpylea 99 
                 ++add+W++l+++v++l+n e+l+++iEdln ++ lh+q ++++ +++ l++++l++L+ +++  L+++L +++ee +l++L+eiW ff +++lpy+e+
  EPX73702.1 220 MSADDTWSILESEVCTLYNWESLHYTIEDLNGILVLHLQSCVRE-RTMDLFTSHLDSLFPKATNKLSESLFPIPEEYFLSKLLEIWLFFLSSILPYIEG 317
                 578*****************************************.****************************************************** PP

        HbrB 100 vfLPLetefklssllaeskekrsaspasqasssssstssssksserldvrrllLiaFRDsvvlPiyerl 168
                 +fLP++t++        s+ek+            + ++++++++e+ +v+rl+L++FRD+++lP ++r+
  EPX73702.1 318 IFLPIKTKLFD------SQEKA--------LLPYEINEYCHTNREKFNVQRLMLTSFRDYMILPAIDRI 372
                 ********992......22222........111256789**************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (431 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       748  (0.0417201); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 2884.96
//
Query:       EPX73703.1  [L=381]
Description: alpha-1,2-mannosyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.2e-108  363.2  14.0   1.5e-108  362.9  14.0    1.0  1  Glyco_transf_15  Glycolipid 2-alpha-mannosyltransferase


Domain annotation for each model (and alignments):
>> Glyco_transf_15  Glycolipid 2-alpha-mannosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  362.9  14.0  8.4e-113  1.5e-108      35     325 .]      35     337 ..      22     337 .. 0.92

  Alignments for each domain:
  == domain 1  score: 362.9 bits;  conditional E-value: 8.4e-113
  Glyco_transf_15  35 tlefkpkslvnrgrkPie.dene........nAtllalvrnselakilrsikkvekrFnkkfnYpyvfindepftekfkekieklveeadvefg 119
                      +++++p +++++ + P+e ++ +        nAtl++l+rn++l   l si++ve+rFn++++Yp++f+nd pf+e+f ++++ + + ++++++
       EPX73703.1  35 SVNYEPIHFTKK-NVPTEyNDGKnnqlpalmNATLFMLCRNKDLSAALSSIQNVEDRFNRRYHYPWTFMNDAPFSEEFINATSAMAS-SNTTYV 126
                      456666666333.334342322256788889**************************************************999999.****** PP

  Glyco_transf_15 120 eipkeewsyPefideekaakareelad..iaygdsesyrhmcRyysGlfykhellkkydyYwRvePdiklycdieyDvfkymkdekkiygFtls 211
                       + ++ew  P+ ++ ++a k+ ++++   i+yg s syr mcR++sG+fy+  +l++ydyYwRveP++   cdi yD f+ ++dekk ygF++s
       EPX73703.1 127 RLEQHEWGLPKGLNMNRALKTIRDMMRrsIIYGFSLSYRIMCRFNSGFFYRNSVLNNYDYYWRVEPGVIYSCDITYDPFRLLRDEKKAYGFVIS 220
                      ******************99999999889***************************************************************** PP

  Glyco_transf_15 212 lkeieetiktlWdstkkflkenkefieeknslsflsdddqd...tynlCeFwsnfeigdldffrseayekfFeylDskGgffYerWgdapvhsi 302
                      l e+ eti+tlW++t++f+ken+++++ +nsl+f++dd+     +yn+C+Fwsnfei+dl+ffrs+ay+++FeylD++ gffYerWgdap+hsi
       EPX73703.1 221 LPEYPETIPTLWNTTREFIKENPQYLAPHNSLDFITDDNMGmdgEYNYCHFWSNFEIADLNFFRSDAYNDYFEYLDERFGFFYERWGDAPIHSI 314
                      ************************************999767779************************************************* PP

  Glyco_transf_15 303 avslllpkdkihffedigyshdp 325
                      a+sl+l+k+++h+fed gy+h p
       EPX73703.1 315 AASLFLNKSQLHYFEDFGYYHMP 337
                      ********************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (381 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       483  (0.0269396); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2686.36
//
Query:       EPX73704.1  [L=306]
Description: hydrolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      4e-29  101.6   0.0      5e-29  101.3   0.0    1.1  1  Lactamase_B_2  Beta-lactamase superfamily domain
    1.6e-07   31.5   0.0    2.5e-07   30.9   0.0    1.3  1  Lactamase_B    Metallo-beta-lactamase superfamily
     0.0002   20.9   0.0    0.00032   20.2   0.0    1.2  1  Lactamase_B_6  Metallo-beta-lactamase superfamily domain
  ------ inclusion threshold ------
       0.11   12.4   0.0       0.18   11.7   0.0    1.4  1  Lactamase_B_3  Beta-lactamase superfamily domain


Domain annotation for each model (and alignments):
>> Lactamase_B_2  Beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.3   0.0   1.1e-32     5e-29       2     193 ..      71     265 ..      70     273 .. 0.89

  Alignments for each domain:
  == domain 1  score: 101.3 bits;  conditional E-value: 1.1e-32
                    EEEES--TTHHHHHTCGGS--SSS--..SEEEEE-SS--HHHHGGGGCCCC.....C--EE.EEEEEEHHHHHHCCTTCGHHHCHTT.......TT CS
  Lactamase_B_2   2 riLiDagpdlrqqalralqPvelrdelppidaVllthaHyDHlaglltlre.....lrpkk.lplyapkgvlavleanfvylaleee.......pa 84 
                     iLiD+g  +   a+  +     +++++ idaVllthaH+D+++gl++lr+       + + +++y +k++   ++++f+y ++  +       p+
     EPX73704.1  71 TILIDCGKTFYMAAMEFM----VKHKIRNIDAVLLTHAHADAINGLDDLRAwtsggVVQ-DtMKIYLTKDTFVSISRSFPYMVDVSQatgggsvPT 161
                    69*******999955555....578999***********************98885333.349********************9999********* PP

                    EEEEEE-TTSEEEECSTTEEEEEEEE-EE--C....TCCE-TTTSEEEEEECTTEEEEEESS-S---HHHHHHHCT-SEEEEE-S-SSTTHHHHHH CS
  Lactamase_B_2  85 vnvheldwgesfelgdggleitatparhksgr....rldrnagdtlGlriegggkrvyyigDtgyipeeigerlggadllllditayeddemirhm 176
                     + + ++++e+fel+  gl++t++p++  +g     ++++ +  ++G+ri+     + yi D++yip++ + +++g  +++ld+ +  +      +
     EPX73704.1 162 FDYRIFNPEEPFELE--GLDVTTIPLPVHHGVyfspGKESVPFINMGFRIG----DLSYISDCNYIPPKTKYLMDGSRVVVLDALRRIP-----YP 246
                    **************8..78999999999999988888888888********....****************************998888.....57 PP

                    T---STSHHHHCTTSS..S CS
  Lactamase_B_2 177 gHltpeeaveaaadlg..a 193
                    +H+t e+a  +a  l   +
     EPX73704.1 247 SHFTFEQAHSFASSLTpaP 265
                    *********9999988444 PP

>> Lactamase_B  Metallo-beta-lactamase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.9   0.0   5.6e-11   2.5e-07      16     139 ..      70     196 ..      68     245 .. 0.89

  Alignments for each domain:
  == domain 1  score: 30.9 bits;  conditional E-value: 5.6e-11
                  CEEEES--SCHHHHHHHHHHHHHTSGGGGEEEEE-SBSSHHHHTTGGGCTTHHCCEETCCEHHHHCCHCHHHHHHHHHCCHH......TTCHCGCCEE CS
  Lactamase_B  16 gviLiDtGtsteaaraalelaalglkpkdvdavilTHlHlDHiGglgglveatdvpvgavaeeapalfmeeaddaasrkgll......lagvsadkpd 107
                  ++iLiD+G +   a +    + ++ k++++dav+lTH+H+D i gl++l+  t   v+    + +  ++  +  ++s+          + g ++  ++
   EPX73704.1  70 KTILIDCGKTFYMAAME---FMVKHKIRNIDAVLLTHAHADAINGLDDLRAWTSGGVVQDTMKIYLTKDTFVSISRSFPYMVdvsqatGGGSVPTFDY 164
                  689*****888887775...67***************************9999888888888888888888877777776669*****9999999999 PP

                  EEETTTEECCCTEEEEEHECTTSTSCCEEEEE CS
  Lactamase_B 108 vdeeeldgnaggrralyvtggpghghghgvve 139
                  +  ++++ ++++++++ +++ p+h+++ ++ +
   EPX73704.1 165 RIFNPEEPFELEGLDVTTIPLPVHHGVYFSPG 196
                  99999999999999999999999999988765 PP

>> Lactamase_B_6  Metallo-beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.0   7.2e-08   0.00032       8      75 ..      71     136 ..      67     154 .. 0.80

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 7.2e-08
  Lactamase_B_6   8 kiLlDvGwdeskvslesalkelekv.iptvdliLLshatlehlGayallyakfks.klllnipvyatlpv 75 
                    +iL+D+G + + +    a++++ k+ i ++d++LL+ha ++ + ++  l a      +  ++++y t+++
     EPX73704.1  71 TILIDCGKTFYMA----AMEFMVKHkIRNIDAVLLTHAHADAINGLDDLRAWTSGgVVQDTMKIYLTKDT 136
                    7******997633....566666655*******************9888765544256678889988765 PP

>> Lactamase_B_3  Beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0     4e-05      0.18      17      95 ..      70     197 ..      63     238 .. 0.69

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 4e-05
  Lactamase_B_3  17 arilvDPfkanlgyeppa.........eeaDlvlisqaledHahletlkql............................................. 58 
                    ++il+D +k   +++  a         +++D+vl+++a++d  +   l  l                                             
     EPX73704.1  70 KTILIDCGK---TFYMAAmefmvkhkiRNIDAVLLTHAHADAIN--GLDDLrawtsggvvqdtmkiyltkdtfvsisrsfpymvdvsqatgggsvp 160
                    688888875...233333345556666************88544..33333445888888888888888888888887777777777777777777 PP

  Lactamase_B_3  59 aenvkvleegeslevggleiravatshdavggserge 95 
                      ++++ +++e +e++gl++++++     ++   +g+
     EPX73704.1 161 TFDYRIFNPEEPFELEGLDVTTIPLPVHHGVYFSPGK 197
                    6677777778889999999999988775544333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (306 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       387  (0.0215851); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 2135.53
//
Query:       EPX73705.1  [L=314]
Description: Gtr1/RagA G protein Gtr2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.9e-70  235.2   0.8    7.9e-70  234.8   0.8    1.2  1  Gtr1_RagA  Gtr1/RagA G protein conserved region
    3.8e-05   23.2   0.0      5e-05   22.8   0.0    1.3  1  Arf        ADP-ribosylation factor family
     0.0054   16.2   0.0     0.0077   15.7   0.0    1.3  1  SRPRB      Signal recognition particle receptor beta subunit
     0.0083   16.3   0.0      0.015   15.5   0.0    1.5  1  Roc        Ras of Complex, Roc, domain of DAPkinase
  ------ inclusion threshold ------
      0.031   14.4   0.0      0.097   12.8   0.0    1.8  2  MMR_HSR1   50S ribosome-binding GTPase
      0.035   13.7   0.2      0.047   13.2   0.2    1.2  1  GTP_EFTU   Elongation factor Tu GTP binding domain
      0.073   13.1   0.0        0.2   11.7   0.0    1.7  1  AAA_14     AAA domain


Domain annotation for each model (and alignments):
>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  234.8   0.8   3.1e-73   7.9e-70       1     232 []       5     229 ..       5     229 .. 0.97

  Alignments for each domain:
  == domain 1  score: 234.8 bits;  conditional E-value: 3.1e-73
   Gtr1_RagA   1 kvLLmGksgsGKtsmrsiiFdnylardtlrlgatidveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDvesreleedletlk 99 
                 +++LmG ++sGK+s+++++F ++ +++tl+l++t++++++++  ++++++++wD++Gq ++++ +   + e+if +vg+li+V+D++ +++ ++l++l+
  EPX73705.1   5 RIILMGLRRSGKSSIQKVVFYKMPPNETLFLESTARLTQEHI--SSFIDFSVWDFPGQVDVFDAA--FDFESIFIQVGALIFVIDAQ-DDYLDALARLH 98 
                 589***************************************..8*******************8..8899****************.88********* PP

   Gtr1_RagA 100 eilealrqyspeakvfvlihKmDliqedereeifeerkeeireeiekleke..eiqffaTSiwdeslykAfssivqklipnldvleelLkklaeaieae 196
                  ++ +++ ++p+++++v+ihK+D+++++ + ++++++++++++e+++++ e   i+f++TSi+d+s+++Afs+++qklip+l++le+lL+ ++ ++ +e
  EPX73705.1  99 VTVARVVAINPNICIEVFIHKVDGLSDEFKIDTQRDIQQRTQDELADIGLEnvPISFHLTSIFDHSIFEAFSRVIQKLIPQLPTLENLLNIFCANSLVE 197
                 **********************************************999887789******************************************** PP

   Gtr1_RagA 197 evlLferstflviatvsskeaeekdasrfekvseii 232
                 ++++f++ ++++iat+s ++++   ++++e++s++i
  EPX73705.1 198 KAYVFDVLSKIYIATDS-SPVD---VQSYEICSDFI 229
                 *****************.8887...899******97 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.0     2e-08     5e-05      15      94 ..       4      89 ..       1     174 [. 0.83

  Alignments for each domain:
  == domain 1  score: 22.8 bits;  conditional E-value: 2e-08
                EEEEEEESTTSSHHHH....HHHHHHSSCEECSSSSSEEEEEEEETTEEEEEEEE-SSGGGGGG...GGGGCTTESEEEEEEETT-C CS
         Arf 15 lrilllGLDnaGKtTi....lkklkleelvttvPTigfnveeleiknlkftvwDvGGqeklRpl...WknYfektdavifvvDsadr 94
                 ri+l+GL  +GK+ i     +k+  +e+     T   + e+++   ++f+vwD  Gq  +      +++ f ++ a+ifv+D++d 
  EPX73705.1  4 RRIILMGLRRSGKSSIqkvvFYKMPPNETLFLESTARLTQEHISS-FIDFSVWDFPGQVDVFDAafdFESIFIQVGALIFVIDAQDD 89
                69***********986443378999999999**********9985.7***********9987653337889*************986 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0     3e-06    0.0077       4     109 ..       4     108 ..       1     149 [. 0.70

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 3e-06
                 -EEEEE-STTSSHHHHHHHHHHSS---B---SS-EEETTG....GGTT-SEEEETT-GCCSHHHHHHHHHHGGEEEEEEEEETTS-HHHHHHHHHHHHH CS
       SRPRB   4 pavllvGlsdsGKTslftrLttdsvkktvtSqessaalkv.ksekgskltliDfPGheklrqklleklkaksslkglvfvvDStidpkevkevAEllye 101
                 ++++l+Gl  sGK s+ + +  +   +    +es+a l   + +    + + DfPG++ +    ++      ++ +l+fv+D+   +  +   A l ++
  EPX73705.1   4 RRIILMGLRRSGKSSIQKVVFYKMPPNETLFLESTARLTQeHISSFIDFSVWDFPGQVDVFDAAFDFESIFIQVGALIFVIDAQ--DDYLDALARLHVT 100
                 78*************988888774444333334444333311345567899********99999999889999*********75..3445666677666 PP

                 HHHHHHHH CS
       SRPRB 102 illitekl 109
                 ++ +++++
  EPX73705.1 101 VARVVAIN 108
                 66666644 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0     6e-06     0.015       1     118 [.       5     120 ..       5     122 .. 0.56

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 6e-06
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SG.GCTTT...T-HHHHCTSCEEEEEEEGHHH... CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGq.erfrs...lhplylreaalailvydsrss... 92 
                 +++l+G  ++GK+s+ k +   k+ ++e+  +  +   ++    ++       + + +++WD+ Gq + f++    ++++++   ++i+v+d++++   
  EPX73705.1   5 RIILMGLRRSGKSSIQKVVF-YKMPPNETLFLESTARLTQ----EH-----ISSFIDFSVWDFPGQvDVFDAafdFESIFIQV-GALIFVIDAQDDyld 92 
                 699***********987777.4555555444433332211....22.....224599*********44555533245566555.455566665543232 PP

                 ..HCHHHHHHHHHHHCSSS-EEEEEE-T CS
         Roc  93 ..enlkeWlkelkkvagkspvilvgnki 118
                   ++l+  +  + + ++++++ + + k+
  EPX73705.1  93 alARLHVTVARVVAINPNICIEVFIHKV 120
                 2244555555555555555555555555 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   3.8e-05     0.097       1      92 [.       5      92 ..       5     119 .. 0.71
   2 ?   -1.8   0.0       1.3   3.3e+03      50      84 ..     232     273 ..     217     294 .. 0.56

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3.8e-05
                EEEEEESTTSSHHHHHHHHHTS.TEEESSSTTSSSSEEEEEEEETT.EEEEEEECGGCSSHHHHHHHHHHHHHH.HHCTSEEEEEEETTTTCSHH CS
    MMR_HSR1  1 evaivGrpNvGKStLinaltge.kaivsdkpgtTrdinegrvklkg.keielvDtpGliegaseekglgkafla.leeadlillvvdaseeklkp 92
                +++++G   +GKS++ +  + +     + +   T   ++++++     ++ ++D pG ++      + + +f++  +++ ++++v+da+ +++ +
  EPX73705.1  5 RIILMGLRRSGKSSIQKVVFYKmPPNETLFLESTARLTQEHIS--SfIDFSVWDFPGQVD----VFDAAFDFESiFIQVGALIFVIDAQ-DDYLD 92
                6899***************988656777777777777777777..4478********655....22334444443345899******77.43433 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 1.3
                 EEECGGCS...SHHHHHH..HHHHHHHHHHC.T.SEEEEEEE CS
    MMR_HSR1  50 lvDtpGli...egaseek..glgkaflalee.a.dlillvvd 84 
                 ++D+  ++   +++++e+  +  ++  ++++ + dl+l++ +
  EPX73705.1 232 ILDIGSIYgcaHEKHSERhpDALDETSSIIRlSnDLVLVLRE 273
                 556666553321222222243333344444433255555554 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.2   1.9e-05     0.047      72     192 ..      52     177 ..      36     234 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.9e-05
                 EEEEEESSSGG.GHH..HHHHHHHT-SEEEEEEETTTB.STHHHHHHHHHHHHTTTE....EEEEEESCGSTHHHHH.HHHHHHHHHHHHHHHHHHHHH CS
    GTP_EFTU  72 inliDtPGHvd.Fsk..evirglrvlDgavlvvdaveG.vepqteevlrlalkegvp....iivfiNKmDrlkaelk.eiveevkqklsrkeeklekyg 161
                 +++ D PG vd F    + +    ++   ++v+da+++   +  + ++ +a+ + ++    i vfi K+D l +e+k  ++++++q+    +++l ++g
  EPX73705.1  52 FSVWDFPGQVDvFDAafDFESIFIQVGALIFVIDAQDDyLDALARLHVTVARVVAINpnicIEVFIHKVDGLSDEFKiDTQRDIQQRT---QDELADIG 147
                 55668888888665522445568899999*******9966777888899988888887765779********9999845677899888...55566666 PP

                 HTTTTTEEEEEEBTTTTBTHHHHHHHHHHHS CS
    GTP_EFTU 162 ekgekevpvvfgSalkgegvktllealvell 192
                  ++   +++  +S ++   ++++ +++ +l+
  EPX73705.1 148 LENV-PISFHLTSIFDHSIFEAFSRVIQKLI 177
                 6654.66666666666666665555555544 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   7.8e-05       0.2       5      36 ..       6      35 ..       2      54 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 7.8e-05
      AAA_14  5 lvitGaRrvGKTtllkqlikellvkkesilyi 36
                ++++G+Rr+GK+ + k ++++    ++++l++
  EPX73705.1  6 IILMGLRRSGKSSIQKVVFYKMP--PNETLFL 35
                89************999987755..5655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       524  (0.0292264); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2249.64
//
Query:       EPX73706.1  [L=349]
Description: alcohol dehydrogenase Adh1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.9e-34  117.2   1.4    5.5e-34  116.3   1.4    1.4  1  ADH_N         Alcohol dehydrogenase GroES-like domain
    3.2e-21   75.7   0.9    5.2e-21   75.0   0.9    1.3  1  ADH_zinc_N    Zinc-binding dehydrogenase
     0.0078   17.3   0.0      0.014   16.4   0.0    1.5  1  ADH_zinc_N_2  Zinc-binding dehydrogenase
  ------ inclusion threshold ------
      0.018   14.4   0.3       0.03   13.6   0.3    1.4  1  AlaDh_PNT_C   Alanine dehydrogenase/PNT, C-terminal domain
      0.028   14.3   0.1       0.12   12.3   0.0    2.0  2  ADH_N_2       N-terminal domain of oxidoreductase


Domain annotation for each model (and alignments):
>> ADH_N  Alcohol dehydrogenase GroES-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.3   1.4   1.5e-37   5.5e-34       2     106 ..      34     139 ..      33     142 .. 0.96

  Alignments for each domain:
  == domain 1  score: 116.3 bits;  conditional E-value: 1.5e-37
                 TEEEEEEEEEEE-HHHHHHHTTSTTTTSSSSEE---EEEEEEEEESTT-CS--TT-EEEE-SEEE.-SSSHHHHTT-GGG-TTBEETTTSS-SSSBSEE CS
       ADH_N   2 gevlikvkaagiCgsDlhilkggkelevklplilGHEivGeveevgpevkklkvGdrVvveplis.cgeCaaCkegeenlCeeakllgvsldGgfaeyv 99 
                 ++vl+++k++g+C++Dlh l+g++ l vklpli GHE +G+v++vg++v++lk+GdrV v+++ s cg+C++C +g+e++C++ +l g+++dG+f+ y 
  EPX73706.1  34 DQVLVNIKYTGVCHTDLHALQGDWPLDVKLPLIGGHEGAGVVVKVGRGVSRLKIGDRVGVKWMNSsCGNCEYCMKGDETICPHIQLSGYTVDGTFQHYA 132
                 89***********************************************************99888********************************* PP

                 EECGGGE CS
       ADH_N 100 vvpekkl 106
                 +++++++
  EPX73706.1 133 LANATHA 139
                 **98876 PP

>> ADH_zinc_N  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.0   0.9   1.5e-24   5.2e-21       1     128 [.     184     310 ..     184     312 .. 0.91

  Alignments for each domain:
  == domain 1  score: 75.0 bits;  conditional E-value: 1.5e-24
                 HHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTESEEEETTTCHHHHHHHHHTTTSSEEEEEESSCSHHHHHHHHHCEEEEEEEEECSCTSSEEE.EE CS
  ADH_zinc_N   1 gvGlaavqlAkalGaeviavdsseeklelakklGadevinykeadlverikeltggegvdvvfecvGsgatleaalkllkpgGrlvvvGggkgeee.fd 98 
                 g+G++avq+Aka+ ++v+a+d  ++k el++ +  d++++ k++d+ve +ke tgg g++  +  + s++++e+a ++++pg ++v+v+++ g +   d
  EPX73706.1 184 GLGHLAVQYAKAMAMRVVAIDTGDDKKELVANFHGDVFVDFKTDDVVEVVKEKTGG-GAHGTLVLSTSPKSYEQAASFARPGSTMVTVAMPAGAKLgAD 281
                 89******************************999******555**********55.********************************9555443599 PP

                 HHHHHHTT-EEEEE-SSCHHHHHHHHHHHH CS
  ADH_zinc_N  99 lrnlllkeksilGsllgslreefkealdll 128
                 ++ l+ k++++ Gs++gs r +  eald +
  EPX73706.1 282 IFWLTVKQLKVCGSHVGS-RLDSVEALDYV 310
                 99999*************.88887788766 PP

>> ADH_zinc_N_2  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0     4e-06     0.014       4     133 .]     219     345 ..     216     345 .. 0.69

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 4e-06
                   SEEEETTSTTHH....HHH-T.T-EEEEEES-HHHHH.HHHHHHEEEEEEEEE----....S-EEE-CHHHCTTT-EEEE--GGG...-........ CS
  ADH_zinc_N_2   4 devidyrtedfe....aatgg.egvDvvldtvggealleaslkvlpggGrlvsiggpp...lsaallkpakkrkgrsvkyeflfsmkas........ 84 
                   d ++d +t+d++    ++tgg ++  +vl t   +++ e++ ++ ++g ++v++++p    l a++ +++                 +         
    EPX73706.1 219 DVFVDFKTDDVVevvkEKTGGgAHGTLVLSTSP-KSY-EQAASFARPGSTMVTVAMPAgakLGADIFWLTV------------K---QLkvcgshvg 298
                   677899988888899855544255566666633.445.8998999887999*9986432222222222222............2...1122333322 PP

                   .-HHHHHHHHHHHHHHH----EEEEEEGGGHHHHHHHHHSS--SSEEEE CS
  ADH_zinc_N_2  85 aqadileelaalieeGklrpvvdrvfpleeaaeAhrylesgrarGKiVl 133
                    + d   e +++++ G ++p    v p++ +++ + ++++g+  G+iVl
    EPX73706.1 299 SRLD-SVEALDYVARGLVKPYYK-VQPFSTLPDVYNLMHEGKIAGRIVL 345
                   2455.6899************97.************************8 PP

>> AlaDh_PNT_C  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.3   8.3e-06      0.03      24      77 ..     168     222 ..     157     279 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 8.3e-06
                  TCB---EEEEE.ST.SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTCECEE CS
  AlaDh_PNT_C  24 pgvepakvlvi.Gg.GvaGlqAiatakglgakVtvlDvrparleqleslgakfvev 77 
                  +gv+p++ + i G+ G  G  A++ ak++  +V+++D+  +++e + ++++  v v
   EPX73706.1 168 SGVKPGQWICIpGAgGGLGHLAVQYAKAMAMRVVAIDTGDDKKELVANFHGD-VFV 222
                  5778888665546425679*****************************8877.444 PP

>> ADH_N_2  N-terminal domain of oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   3.4e-05      0.12      12      42 ..      15      45 ..       7      48 .. 0.87
   2 ?   -1.6   0.0      0.71   2.5e+03      68      91 ..     226     249 ..     207     258 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 3.4e-05
     ADH_N_2 12 aptesdfeleeeelpelkdGevlvralylSv 42
                +  ++++++ee+++ e+++++vlv+++y +v
  EPX73706.1 15 HGGPENVKFEEVPVGEPGEDQVLVNIKYTGV 45
                556899**********************876 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.71
     ADH_N_2  68 ggavgeVveSknpdfkvGdlVvgl 91 
                 +  v eVv+ k    + G+lV++ 
  EPX73706.1 226 TDDVVEVVKEKTGGGAHGTLVLST 249
                 556888999999999999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (349 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 2443.43
//
Query:       EPX73707.1  [L=293]
Description: U4/U6 X U5 tri-snRNP complex subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-22   79.1   2.8    4.7e-22   77.8   2.8    1.7  1  SNRNP27     U4/U6.U5 small nuclear ribonucleoproteins


Domain annotation for each model (and alignments):
>> SNRNP27  U4/U6.U5 small nuclear ribonucleoproteins
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.8   2.8   2.6e-26   4.7e-22       3      54 ..     242     291 ..     240     293 .] 0.94

  Alignments for each domain:
  == domain 1  score: 77.8 bits;  conditional E-value: 2.6e-26
     SNRNP27   3 eeemmklmGfggFdtTkgkkvegnnegavkkkkkrkyRQYMNRkgGFNRpLd 54 
                  e+m+++mGf+gF+tT gkk+ +   g v k+kk kyRQYMNR gGFNRpL+
  EPX73707.1 242 MEDMQSMMGFSGFGTTTGKKHGDV--GDVFKQKKAKYRQYMNRPGGFNRPLE 291
                 589******************985..9************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       801  (0.0446762); expected 358.6 (0.02)
Passed bias filter:                      234  (0.0130515); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.31s 00:00:00.89 Elapsed: 00:00:00.47
# Mc/sec: 1878.62
//
Query:       EPX73708.1  [L=969]
Description: hypothetical protein SOCG_02926 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.9e-32  110.4   0.0    3.4e-31  108.4   0.0    1.9  1  NAD_binding_4    Male sterility protein
    3.1e-28   98.5   0.0      5e-28   97.9   0.0    1.3  1  AMP-binding      AMP-binding enzyme
    1.2e-08   34.7   0.0    2.1e-08   33.9   0.0    1.3  1  Epimerase        NAD dependent epimerase/dehydratase family
    1.6e-05   24.5   0.0    2.3e-05   24.0   0.0    1.2  1  GDP_Man_Dehyd    GDP-mannose 4,6 dehydratase
    7.1e-05   23.1   0.0    0.00017   21.9   0.0    1.6  1  PP-binding       Phosphopantetheine attachment site
     0.0096   15.1   0.0      0.015   14.5   0.0    1.2  1  Polysacc_synt_2  Polysaccharide biosynthesis protein
  ------ inclusion threshold ------
      0.072   13.0   0.0       0.13   12.2   0.0    1.3  1  KR               KR domain
      0.092   11.7   0.0       0.18   10.8   0.0    1.4  1  3Beta_HSD        3-beta hydroxysteroid dehydrogenase/isomeras
        0.3   10.9   0.0        0.3   10.9   0.0    2.3  3  Lantibiotic_a    Lantibiotic alpha


Domain annotation for each model (and alignments):
>> NAD_binding_4  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.4   0.0   1.7e-34   3.4e-31       1     236 [.     637     839 ..     637     858 .. 0.90

  Alignments for each domain:
  == domain 1  score: 108.4 bits;  conditional E-value: 1.7e-34
                    EE-TTSHHHHHHHHHHHHHS-.TEEEEEE-SSSHHHHHHHHHHHT-SS-HHHHHHHHHTTTEEEEE--TTSGGGG--HHHHHHHHHH--EEEE--S CS
  NAD_binding_4   1 lTGaTGFLGkvLlekLLrttpevkiyllvRaksgesaeeRleeelekkelfsallkelaerikvveGDlseprlGLseedlqelaeevdviihsaA 96 
                    lTGaTGFLGk+Ll+  L+  +  k+++l+R  s+++ae+R+      +++  +l ++ a+ ++v + Dl++++l Ls+e+++ l ++v+ iih++A
     EPX73708.1 637 LTGATGFLGKRLLKYFLNGGE--KVICLIRGLSDADAEKRM------YGMCPEL-QKHANSLIVWASDLNDENLSLSSEKWEFLEKNVTKIIHNGA 723
                    8******************99..9*****************......5555555.467899*********************************** PP

                    S-S.STTSSEEHHHHHHHHHHHHHHHTSSS--.-EEEEEEGGGTTS-TTT--SSS-H......HHH--EEEETTTCCCHHHHHHHHHHHHHHHHHH CS
  NAD_binding_4  97 tvnfdepykellrvNveGtrevlelakklkklkvllhvSTayvngeregeveekvyeegekeekldederaklkglpntYeqsKalaEklvrearr 192
                     v+++++y++ll+ Nv++t+ +l+l+  + k+  +++vS     g++                 + +    + kg + +Y+ sK+++E l+++a+ 
     EPX73708.1 724 MVHWTKTYHDLLQSNVMSTKTLLDLSMVGPKK--FIFVS---GGGQQ-----------------ELDVIDHNAKGQAMGYTLSKFASEVLCEKAKG 797
                    **************************977666..*****...23333.................34667788889999*****************9 PP

                    HH---EEEEEE-EEE--SSST---TTSHHHHHHHHHHHH-EEES CS
  NAD_binding_4 193 rsglpvvivRpsiitgesktGwingsdlgirgllgliakgvlpe 236
                    +++  +  + p  i++    G i   d+ +r++  ++++++ p+
     EPX73708.1 798 KGNPEIYAILPAFILA--NDGEILARDFFWRFVQTCVRMKKWPT 839
                    9999999999****99..7899****************999885 PP

>> AMP-binding  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.9   0.0   2.5e-31     5e-28       3     422 ..      15     421 ..      13     422 .. 0.80

  Alignments for each domain:
  == domain 1  score: 97.9 bits;  conditional E-value: 2.5e-31
                  HHHHHSTTSEEEEE....CCSTEEEEHHHHHHHHHHHHHHHHHTTSSTT-EEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS-HHHHHHHHHHHTES CS
  AMP-binding   3 eqaaktpdkvalvd....sgegqtlTYreldervnrlAagLrslGvkkgdrVaillpnspewvvallailkaGavvvplnptltaeelayiledseak 96 
                  e+a ++p+k++l d    +g +++++  +l +r+n +A+++++ +v +g +V+i++++ +++v ++la++  G ++v  n ++ a+    i e   ++
   EPX73708.1  15 EKAINKPNKTFL-DiyneNGIQKSYSHLDLLHRTNTIARFFQE-NVPSGVTVGIFMRQELDFVCSILALWATGHTCVIFNEDWDADVATVISERLHIT 110
                  56678999**99.44688899999999999*************.****************************************************** PP

                  EEEETCTCCCHHHHHHHHSCC-EECEEEEESCCS-HCCHCCCHCCCCSCTTS-TSCCCS-BTTSEEEEEEE--SSSS-EEEEEEHHHHHHHHHHHHHH CS
  AMP-binding  97 vliatvdselleklleaaakleavklvivldadellkeeelkeeeeseekaekpeeeeelkpddlayiiYTSGTTGkPKGVmlshrnlvanvaslkle 194
                   l+   ++       e+ + l+ vk+ ++l        + ++++ +++       + ++  + ++a+i  +SG+TG PK +  +   +v ++ +  ++
   EPX73708.1 111 SLV--FSDLS-----EKYH-LPGVKS-LHL--------SAVPTDPNAP-------QIQTGYEPEIAMINHSSGSTGIPKSIPFRISKYVPAADWG-IP 183
                  999..43322.....2222.222222.222........2233333333.......233345568*********************9998887774.33 PP

                  HC.SCCTT........T-EEEESS-TTSCHHHHHHHHHHHHTT-EEEE-TTCGCCHHHHH.HHHHHHHT-SEEEEEHHHHHHHHH.CCCHHCHHHHCC CS
  AMP-binding 195 tr.fklke........ddvvlsilplahifglilelllallsGatvvllpkdaaldpkll.lelieklkvtviagvPrvlealle.sgalkaakkakd 281
                  +  ++lk           + l ++    + +  + ++ +++  a v +++k+++l    + l++  k++++ i++ P ++  +l+     k   ++++
   EPX73708.1 184 ELgHDLKTavimaptfALTTLNWMTSLLDPEG-SIMFPSMHIRAPVPVSSKTEQLA---WnLHYALKYGCQRICLLPKLVLLMLQiT--VK---ENES 272
                  33322322355555666677777777777786.88999999999999988888865...23788889****************9965..33...3459 PP

                  GTT-SEEEEESS-EBHHHHHHHHHHHTC.EEEEEEEEGGGSSECEECHCTTTCTSTTS-BEE-TTEEEEEE-TTTSCBEE..TTSEEEEEEEETTS-S CS
  AMP-binding 282 lsslrlvllggeplspellrffralfge.evlegYGlTEttgvvtvlpleedkkklgsvGkplpgvevkivDeetgepvp..dgeeGellvrgpgvmk 376
                  +++ + v+++ge ++p+l + ++  +++ e++ +YG TEt+   ++++  +d + ++  Gk +   e++++De+ ++pvp   g++G ++       +
   EPX73708.1 273 FPACKKVMVAGEMIPPNLRENCQHALPNaEFSAAYGSTETGFSGFIAD-LKDSSLVYFPGKTI--KECMLLDEN-MKPVPreVGNKGFVCTITDAQSE 366
                  9**99999********************99**************8555.45557888889998..5799***99.****9778888************ PP

                  EBTT-HHHHHHHEEE......TCC.EEEEEEEEEE.ETTSE..EEEEEECCCEEEE CS
  AMP-binding 377 gYlkkpeataeafds......egr.wlrTGDlgrl.dedGy..leivgRkkdlikl 422
                   Y +++e t+ a  +      + +  +r  Dl+++ ++dG   + i gR+  ++k+
   EPX73708.1 367 PYVGDDEGTQAANREtyltvsN-QpAVRFADLATWeQKDGKwgISIKGRLGRIVKR 421
                  ****999988887656787852.4499999*****6689*666********99996 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   0.0   1.1e-11   2.1e-08       1     160 [.     635     799 ..     635     816 .. 0.80

  Alignments for each domain:
  == domain 1  score: 33.9 bits;  conditional E-value: 1.1e-11
                 EEEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC...................EEEE--TT-HHHHHHHHHHHT-SEEEE--S---HHHH CS
   Epimerase   1 ilVtGatGfiGsalvkallekgyevigldrlssasntarledl...................elveldltdrsalerlfkeeqpdavihlAavggvaas 80 
                 +l+tGatGf+G+ l+k++l+ g +vi+l r  s+   +++                      +l + +l  +s+  +++++ +++ +ih +a   v+++
  EPX73708.1 635 VLLTGATGFLGKRLLKYFLNGGEKVICLIRGLSDADAEKR--MygmcpelqkhanslivwasDLNDENLSLSSEKWEFLEK-NVTKIIHNGA--MVHWT 728
                 699*********************9999998555444433..2457***********888887777777777788899886.9*******66..55555 PP

                 HHSHHHHHHHHTHHHHHHHHHHHHHTCTEEEEEEEGGGGTSCSSSSBSTCSTTS----SSHHHHHHHHHHHHHHHHHHHH CS
   Epimerase  81 sedpadfieknlqgtlnlleaarkagvkrllflsSsevYGkdaeqpkeettltgplkpnspYaaaKlageklveayaaqy 160
                  ++  d++++n++ t +ll+ +   g+k+++f+s     G ++e    ++++     +   Y ++K a+e l+e+++ ++
  EPX73708.1 729 KTY-HDLLQSNVMSTKTLLDLSM-VGPKKFIFVSG----GGQQEL---DVIDHNAKGQAMGYTLSKFASEVLCEKAKGKG 799
                 555.78999***********996.8999******9....655552...333333449999**************987665 PP

>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.0   1.1e-08   2.3e-05       1     128 [.     636     760 ..     636     796 .. 0.78

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 1.1e-08
                    EEETTTSHHHHHHHHHHHHCT-CCEEEEEEESS-TT.HHHHHCTTT...TTGCCEEEEE--TT-HHHHHHH....HHHHT-SEEEE--S---HHHH CS
  GDP_Man_Dehyd   1 LiTGiaGfiGsylaelLlekgyevhgivrrsssfnt.griehlakdpkeeleenlklhkgDltDssslerl....laevqpdevynLAAqshVdvs 91 
                    L TG +Gf G  l++++l+ g +v+ ++r  s  ++ +r+  +  + +++  ++l +   Dl+D++   +     + e +++++++ +A+ h  + 
     EPX73708.1 636 LLTGATGFLGKRLLKYFLNGGEKVICLIRGLSDADAeKRMYGMCPELQKH-ANSLIVWASDLNDENLSLSSekweFLEKNVTKIIHNGAMVHWTKT 730
                    78***************************777776615666666655555.6799999******7644322122377889***************9 PP

                    TTSHHHHHHHHTHHHHHHHHHHHHCT..TTSEEEEEE CS
  GDP_Man_Dehyd  92 fekPeytaevnvlGtlrLLeairalglekkvrfyqaS 128
                    +++    ++ nv+ t +LL++   +g    ++f+++S
     EPX73708.1 731 YHD---LLQSNVMSTKTLLDLSM-VG---PKKFIFVS 760
                    997...99***********9873.34...34666666 PP

>> PP-binding  Phosphopantetheine attachment site
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.0   8.3e-08   0.00017      24      66 ..     550     594 ..     533     595 .. 0.83

  Alignments for each domain:
  == domain 1  score: 21.9 bits;  conditional E-value: 8.3e-08
  PP-binding  24 lf.dlGlDSllavellaaleeefgveiplsdlfe.hptlaelaay 66 
                 lf   GlDS+ av++ + l++e+++e+++++l+    ++++l+a+
  EPX73708.1 550 LFqAHGLDSIKAVQFSSLLKKELNCEMSVTVLLHpKCSPNSLTAA 594
                 55379***************************9777777777765 PP

>> Polysacc_synt_2  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   7.4e-06     0.015       1     127 [.     635     760 ..     635     765 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 7.4e-06
                      EEEETTTSHHHHHHHHHHHHHB-SEEEEEE.....S-HHHHHHHHHH......-TTEEEE....E--TT-HHHH...HH.HTT..T-SEEEE-- CS
  Polysacc_synt_2   1 vlvtGagGsiGselvrqilkkkpkkiille.....rdElklyeiekeleeelkkkklkveivpvigdvrdkerl...ek.aleelkvdvvfhaA 85 
                      vl+tGa+G +G++l++ +l+   k i l+       +E+++y +  el++++++  l    ++   d++d++     ek  + e +v  ++h  
       EPX73708.1 635 VLLTGATGFLGKRLLKYFLNGGEKVICLIRglsdaDAEKRMYGMCPELQKHANS--L----IVWASDLNDENLSlssEKwEFLEKNVTKIIHNG 722
                      89*******************999999984322235799999999999655444..3....33456666655321112213555899******* PP

                      ----HHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-SEEEEEE CS
  Polysacc_synt_2  86 AlKhVPlveenpleaiktNvlgtenvieaaieagvkkvvliS 127
                      A+ h     +  ++ ++ Nv++t+++++ ++  g kk++++S
       EPX73708.1 723 AMVHW---TKTYHDLLQSNVMSTKTLLDLSM-VGPKKFIFVS 760
                      **985...567788999**********9986.6778888888 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   6.6e-05      0.13       3      91 ..     635     725 ..     634     742 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 6.6e-05
                 EEEETTTSHHHHHHHHHHHHHHS-EEEEE-SS....--HHHHHHHHHHHHTT-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE-.--- CS
          KR   3 ylitGGlGgLGlelarwlaekgarhlvllsRsa..aadedskaliaelealgaevevvaaDvsdkdavealleeikaeeppikGviha.Agv 91 
                 +l+tG++G LG+ l +  ++ g++ + l+   +   a++++  +  el+++  +  v a D+ d ++++   e+ +  e++++ +ih  A+v
  EPX73708.1 635 VLLTGATGFLGKRLLKYFLNGGEKVICLIRGLSdaDAEKRMYGMCPELQKHANSLIVWASDLND-ENLSLSSEKWEFLEKNVTKIIHNgAMV 725
                 699****************999988888744321133444446999***************876.567778888888888999999852454 PP

>> 3Beta_HSD  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   8.9e-05      0.18       2     128 ..     637     778 ..     636     788 .. 0.67

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 8.9e-05
   3Beta_HSD   2 vtGgaGFlGralvkeLvrlee..lkevrvl.Dlrespelleelskvnvkk....viegDvtdkd......kleealegvdvvihlaslvdvagkltede 87 
                 +tG++GFlG++l k +++ +e  +  +r l D + ++++     +++ +     v   D++d++      k e   ++v  +ih  ++v  ++ +++d 
  EPX73708.1 637 LTGATGFLGKRLLKYFLNGGEkvICLIRGLsDADAEKRMYGMCPELQKHAnsliVWASDLNDENlslsseKWEFLEKNVTKIIHNGAMVHWTK-TYHD- 733
                 79****************998544566754365555555544444444434445899999997631111133334456777888877777666.5555. PP

   3Beta_HSD  88 imkvnvkGTrnvleacvkagvrvlvYtSs.....aevvgpnslgee 128
                 + + nv  T+++l+  +  g ++++++S      ++v+  n +g++
  EPX73708.1 734 LLQSNVMSTKTLLDLSM-VGPKKFIFVSGggqqeLDVIDHNAKGQA 778
                 8999*********9876.6889999999533333567777766665 PP

>> Lantibiotic_a  Lantibiotic alpha
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.3   1.0       8.4   1.7e+04      22      25 ..     335     338 ..     335     338 .. 0.91
   2 ?   10.9   0.0   0.00015       0.3      11      21 ..     351     361 ..     348     363 .. 0.90
   3 ?   -2.1   0.0       1.8   3.5e+03       9      14 ..     537     542 ..     531     543 .. 0.78

  Alignments for each domain:
  == domain 1  score: -4.3 bits;  conditional E-value: 8.4
  Lantibiotic_a  22 kECM 25 
                    kECM
     EPX73708.1 335 KECM 338
                    7*** PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00015
  Lantibiotic_a  11 LGNkGylCTvT 21 
                     GNkG+ CT+T
     EPX73708.1 351 VGNKGFVCTIT 361
                    6*********9 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 1.8
  Lantibiotic_a   9 krLGNk 14 
                     +LGNk
     EPX73708.1 537 RVLGNK 542
                    48***9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (969 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       407  (0.0227007); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.79u 0.32s 00:00:01.11 Elapsed: 00:00:00.52
# Mc/sec: 5610.19
//
Query:       EPX73709.1  [L=51]
Description: 60S ribosomal protein L39 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      6e-22   77.0  10.9    7.3e-22   76.7  10.9    1.1  1  Ribosomal_L39  Ribosomal L39 protein


Domain annotation for each model (and alignments):
>> Ribosomal_L39  Ribosomal L39 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.7  10.9   4.1e-26   7.3e-22       1      42 []       9      50 ..       9      50 .. 0.98

  Alignments for each domain:
  == domain 1  score: 76.7 bits;  conditional E-value: 4.1e-26
  Ribosomal_L39  1 kKlrLaKalkqNrpvPaWvrlktdrkvrynpkrRhWRrtkLk 42
                   +K +LaKa++qNrp+P+W+rl+t+++++yn krRhWRrtkL+
     EPX73709.1  9 TKQKLAKAQRQNRPIPQWIRLRTGNTIHYNMKRRHWRRTKLN 50
                   69**************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (51 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       396  (0.0220871); expected 358.6 (0.02)
Passed bias filter:                      232  (0.0129399); expected 358.6 (0.02)
Passed Vit filter:                         9  (0.00050198); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.33s 00:00:00.73 Elapsed: 00:00:00.47
# Mc/sec: 325.49
//
Query:       EPX73710.1  [L=65]
Description: hypothetical protein SOCG_02928 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.4e-11   42.6   1.3      5e-11   42.4   1.3    1.1  1  DUF2205     Short coiled-coil protein
    0.00011   22.7   1.7    0.00012   22.7   1.7    1.1  1  AKNA        AT-hook-containing transcription factor
     0.0058   16.5   0.4     0.0064   16.3   0.4    1.0  1  ATP-synt_D  ATP synthase subunit D
  ------ inclusion threshold ------
      0.013   15.6   0.2      0.014   15.5   0.2    1.0  1  DUF4279     Domain of unknown function (DUF4279)
      0.025   14.3   0.6      0.027   14.2   0.6    1.0  1  FANCI_S3    FANCI solenoid 3
      0.025   15.0   1.2      0.026   14.9   1.2    1.1  1  CENP-H      Centromere protein H (CENP-H)
       0.14   12.3   4.9       0.23   11.6   4.9    1.3  1  bZIP_2      Basic region leucine zipper


Domain annotation for each model (and alignments):
>> DUF2205  Short coiled-coil protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.4   1.3   1.9e-14     5e-11      18      66 ..       8      56 ..       2      63 .. 0.91

  Alignments for each domain:
  == domain 1  score: 42.4 bits;  conditional E-value: 1.9e-14
     DUF2205 18 rerLqqqakeLqssLqaLaervdeVkeehdKLesenrfLqqYIgdLmst 66
                r+ ++q+a eLq+ LqaL++ +d+ k+e++ +  e+++L qYIg++m+ 
  EPX73710.1  8 RNLMEQKAMELQQQLQALLDEIDQNKQESENISRESEYLCQYIGSMMAF 56
                667899*****************************************94 PP

>> AKNA  AT-hook-containing transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   1.7   4.5e-08   0.00012      40      77 ..       7      44 ..       2      65 .] 0.80

  Alignments for each domain:
  == domain 1  score: 22.7 bits;  conditional E-value: 4.5e-08
        AKNA 40 psreleaeIyqlgqrleeLkdqtdqlkqkveefskdia 77
                p   +e++ + l+q l+ L d +dq+kq++e+ s++++
  EPX73710.1  7 PRNLMEQKAMELQQQLQALLDEIDQNKQESENISRESE 44
                444579****************************9984 PP

>> ATP-synt_D  ATP synthase subunit D
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.4   2.5e-06    0.0064      17      56 ..       9      48 ..       7      64 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 2.5e-06
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTST CS
  ATP-synt_D 17 slLkkKrdaLilefreilkelkelreeleeelkeayfsla 56
                +l+++K+ +L+++++++l+e+++ ++e e+  +e++   +
  EPX73710.1  9 NLMEQKAMELQQQLQALLDEIDQNKQESENISRESEYLCQ 48
                79****************************9999987766 PP

>> DUF4279  Domain of unknown function (DUF4279)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.5   0.2   5.6e-06     0.014      47      94 ..      13      61 ..       8      65 .] 0.88

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 5.6e-06
     DUF4279 47 eesldleeqldklldrlepkaekikelak.kygleiylqvviyiedgeq 94
                ++ ++l+ ql+ lld++++++++  ++ + +  l+ y+++ + +++ ++
  EPX73710.1 13 QKAMELQQQLQALLDEIDQNKQESENISReSEYLCQYIGSMMAFQNRQT 61
                45899************************77778**********99874 PP

>> FANCI_S3  FANCI solenoid 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.6   1.1e-05     0.027     132     175 ..      11      54 ..       5      62 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 1.1e-05
    FANCI_S3 132 lteklkelikqlqrvlvnflsedeedesisKlallLveilelLs 175
                 +++k+ el +qlq +l+++ ++++e+e+is+++ +L++ +  ++
  EPX73710.1  11 MEQKAMELQQQLQALLDEIDQNKQESENISRESEYLCQYIGSMM 54 
                 5688899999**************************99887665 PP

>> CENP-H  Centromere protein H (CENP-H)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   1.2     1e-05     0.026      11      56 ..      11      57 ..       6      65 .] 0.83

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1e-05
      CENP-H 11 lssellklsqelrelqeeltevekenlrlkrknrelaael.lelake 56
                + +++++l+q+l++l++e+++ ++e+ +++r+++ l + +  + a +
  EPX73710.1 11 MEQKAMELQQQLQALLDEIDQNKQESENISRESEYLCQYIgSMMAFQ 57
                567899****************************9999885555554 PP

>> bZIP_2  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   4.9   8.8e-05      0.23      29      54 .]      10      35 ..       7      35 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 8.8e-05
                HHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_2 29 eleervkeLeeeNaqLrqkveqLeke 54
                 +e++++eL+++ ++L+++++q ++e
  EPX73710.1 10 LMEQKAMELQQQLQALLDEIDQNKQE 35
                69********************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (65 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2118  (0.118133); expected 358.6 (0.02)
Passed bias filter:                      903  (0.0503653); expected 358.6 (0.02)
Passed Vit filter:                        97  (0.00541023); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.50u 0.29s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 412.19
//
Query:       EPX73711.1  [L=245]
Description: histone chaperone Cia1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-65  220.0   0.3    1.9e-65  219.5   0.3    1.2  1  ASF1_hist_chap  ASF1 like histone chaperone
  ------ inclusion threshold ------
        1.3    9.2   6.0        2.2    8.4   6.0    1.4  1  CPSF100_C       Cleavage and polyadenylation factor 2 C-termi
        2.4    7.1  19.4          3    6.7  19.4    1.2  1  Paf1            Paf1
        4.4    6.2  15.6        5.4    5.9  15.6    1.2  1  IFT57           Intra-flagellar transport protein 57
          7    6.0  23.1        8.3    5.7  23.1    1.1  1  SDA1            SDA1
        8.5    4.4  24.1        9.3    4.3  24.1    1.1  1  Nop14           Nop14-like family


Domain annotation for each model (and alignments):
>> ASF1_hist_chap  ASF1 like histone chaperone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  219.5   0.3   6.4e-69   1.9e-65       1     154 []       1     160 [.       1     160 [. 0.94

  Alignments for each domain:
  == domain 1  score: 219.5 bits;  conditional E-value: 6.4e-69
                     X-SEEEEEEEESS-SEETTS-EEEEEEEEESS--SS-EEEEEEEESSSSSGGGEEEEEEEEEES--SEEEEEEEEE----GGGSSS.GGGSEEEE CS
  ASF1_hist_chap   1 mslvnvtnvkvlnnpakfsdpfkfeitfeclekLeedlewkliyvgsaeseeedqeLdsvlvGPikvGvnkFvfeadppdvskipk.edvlgvtv 94 
                     ms+vn+++v+vlnnpakfsd +kfeitfecle+L++dlewkl+yvgsa+s+++dq+Ld++lvGPi+ G+nkFvfeadpp+++ +p+ +dvlgvtv
      EPX73711.1   1 MSIVNILSVNVLNNPAKFSDSYKFEITFECLEPLKSDLEWKLTYVGSATSQSYDQILDTLLVGPIPIGINKFVFEADPPNIDLLPElSDVLGVTV 95 
                     9************************************************************************************999******* PP

                     EEEEEEETTEEEEEEEEEEEEEETT--CTTHHH.....S---GGGEEEEE-TTS-EEEE----TT CS
  ASF1_hist_chap  95 illtasYkeqeFvrvGYyvnneyedeelkenpp.....ekpkieklvRniladkprvtrfkikwd 154
                     ill+++Y+e+eFvrvGYyvnne+e+ +l+e ++      k++i+k+ Rnila+kprvtrf+i+wd
      EPX73711.1  96 ILLSCAYEENEFVRVGYYVNNEMEGINLQEMEDteikkVKVDISKVWRNILAEKPRVTRFNIQWD 160
                     *************************8887644422333678899********************8 PP

>> CPSF100_C  Cleavage and polyadenylation factor 2 C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   6.0   0.00074       2.2       9      85 ..     119     224 ..     116     244 .. 0.54

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00074
   CPSF100_C   9 ksLkwqkveglevatvtgeleieee...................a............eeaeeeekeeeeeeeeeeeeeeeaskkqklaeksekeaseee 76 
                 + +++q++e++e+ +v+  +                        +            +e+eeee+e ee +ee +ee+e+++++++++e+  ++++ee+
  EPX73711.1 119 EGINLQEMEDTEIKKVKVDISK--VwrnilaekprvtrfniqwdNpdfddappvqpdAEEEEEEEEPEEVDEELDEEGEPEEEEEEEEEEGGDDEEEED 215
                 5678899999999999888872..245777777766666555550555556666666556666666666666666666666555555333333333322 PP

   CPSF100_C  77 seekkeslp 85 
                  + ++e+ p
  EPX73711.1 216 IDIEEEEEP 224
                 222222222 PP

>> Paf1  Paf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7  19.4     0.001         3     361     415 ..     171     228 ..     113     240 .. 0.53

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.001
        Paf1 361 eeekeeeeeeeeeeeee...kseeeeekeeekeeaeeeseaeseeessdeeeeeakse 415
                 ++++eeeeeeee ee +   ++e e e+eee+ee+e ++++e+e+ + +eeee++ s+
  EPX73711.1 171 QPDAEEEEEEEEPEEVDeelDEEGEPEEEEEEEEEEGGDDEEEEDIDIEEEEEPSTSQ 228
                 3333333333333333332222222222222222222222222222223333333333 PP

>> IFT57  Intra-flagellar transport protein 57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9  15.6    0.0018       5.4     118     186 ..     155     232 ..     123     245 .] 0.52

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0018
       IFT57 118 kkfkfk..........kpkypkeeeeeeeeeveddaelelekveeeelikseeededeedeeeelklesekkee..kekek 186
                  +++++          +p+ ++eeeeee eev+++ + e e  eeee  ++ee  +dee+e  ++++e+e++ +  + ++ 
  EPX73711.1 155 FNIQWDnpdfddappvQPDAEEEEEEEEPEEVDEELDEEGEPEEEEEE-EEEEGGDDEEEE--DIDIEEEEEPStsQPQNP 232
                 455555444445444455555555555556664433333333333333.223333444444..455555544442222222 PP

>> SDA1  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7  23.1    0.0028       8.3     128     192 ..     159     233 ..     111     245 .] 0.29

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0028
        SDA1 128 e.............eieesdesedeeeeeeeeeekeekeeeeeeeeeeeeeeeeeeeeeekekkkk.....kakeaseeekkk 192
                               +      +e+eeeee ee ++e +ee+e eeeeeeeeee  ++e e+e+        ++ ++s+ +++k
  EPX73711.1 159 WdnpdfddappvqpD-----AEEEEEEEEPEEVDEELDEEGEPEEEEEEEEEEGGDDE-EEED--IdieeeEEPSTSQPQNPK 233
                 033333322322110.....11111111111111111111111111111111111111.1111..111111111111111111 PP

>> Nop14  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3  24.1    0.0031       9.3     359     414 ..     174     228 ..     116     245 .] 0.38

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.0031
       Nop14 359 ddlveseseeeeeeeeedeeeeedeeeeeeeeededdlsdleseeeeeedeleeel 414
                 ++++e+e+e ee +ee dee e +eeeeeeeee  dd+++++  + eee+e + ++
  EPX73711.1 174 AEEEEEEEEPEEVDEELDEEGEPEEEEEEEEEEGGDDEEEEDI-DIEEEEEPSTSQ 228
                 1111111111111111122222111111111111111111111.111111111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1332  (0.074293); expected 358.6 (0.02)
Passed bias filter:                      652  (0.0363657); expected 358.6 (0.02)
Passed Vit filter:                       143  (0.0079759); expected 17.9 (0.001)
Passed Fwd filter:                        29  (0.00161749); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.63u 0.32s 00:00:00.95 Elapsed: 00:00:00.49
# Mc/sec: 1508.61
//
Query:       EPX73712.1  [L=237]
Description: coatomer delta subunit Ret2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.2e-08   34.2   0.1    4.3e-08   33.2   0.0    1.5  2  Clat_adaptor_s  Clathrin adaptor complex small chain


Domain annotation for each model (and alignments):
>> Clat_adaptor_s  Clathrin adaptor complex small chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.2   0.0   2.4e-12   4.3e-08       6     122 ..       7     121 ..       2     140 .. 0.92
   2 ?   -2.0   0.0      0.17     3e+03      18      38 ..     131     153 ..     121     169 .. 0.59

  Alignments for each domain:
  == domain 1  score: 33.2 bits;  conditional E-value: 2.4e-12
                     EEE-TTS-EEEEEESSSS-CHHHHHHHHHHHHHHHTT-SSS-SEEEETTEEEEEEEETTEEEEEEEETTS-HHHHHHHHHHHHHHHHHHCTS-SH CS
  Clat_adaptor_s   6 lilnkkgkvrlakfytavddkkkqklieevyelvsaRdsklsniveledlkviYkryasLYFvvivdeqeneliilelihlfvesLdkyfgnVce 100
                      i+n+ gk  + + + +++  + + l+     lvs + s+ +  ve+e+++ +Y+ + +LY v++ + q n l  ++++hl+ ++L  +  +  e
      EPX73712.1   7 SIVNRGGKAIISRQFREMSRARVESLLSSFPGLVSGK-SQ-NTTVETENVRFVYQPFDELYMVLTTNLQSNILQDIDTLHLLSQALTSICPSSDE 99 
                     599********************************99.33.799*************************************************** PP

                     HHHHHCHHHHHHHHHCCEETTE CS
  Clat_adaptor_s 101 ldlvfnfekvylildEivsgGe 122
                     +++++   +++ + dE+ s G 
      EPX73712.1 100 REILEYAFEIFIAFDEVTSLGY 121
                     ****************998775 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.17
                     EESSSS-CHHH..HHHHHHHHHH CS
  Clat_adaptor_s  18 kfytavddkkk..qklieevyel 38 
                     k y +++++++  q+++  + el
      EPX73712.1 131 KMYLEMESHEEkiQEIVSRNKEL 153
                     55654444433235555555443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1371  (0.0764683); expected 358.6 (0.02)
Passed bias filter:                      572  (0.0319036); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.28s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 1633.01
//
Query:       EPX73713.1  [L=348]
Description: cAMP-specific phosphodiesterase Cgs2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.2e-96  322.4   0.1    3.9e-96  322.1   0.1    1.0  1  PDEase_II      cAMP phosphodiesterases class-II
    0.00098   18.7   0.0     0.0016   18.0   0.0    1.3  1  Lactamase_B_2  Beta-lactamase superfamily domain


Domain annotation for each model (and alignments):
>> PDEase_II  cAMP phosphodiesterases class-II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  322.1   0.1  4.4e-100   3.9e-96       1     338 []      25     342 ..      25     342 .. 0.95

  Alignments for each domain:
  == domain 1  score: 322.1 bits;  conditional E-value: 4.4e-100
                 EEES-HHHHHHHHHH----------EEE--SSSSEEEGGGGS-TT--EEESS-HHHHHT.TTTSH...HHHS-HHHHHHHHHHTEEEEE-S---GGGTH CS
   PDEase_II   1 iatillgqvggldegslssklledkaseefikldagtvlqavrdkltvskylsknvlit.lpksd...fesereikktyeiknniksylItHsHLDHvs 95 
                 +++++lg++gg++e  +s +ll+d ++ e+++ d+g +l+a+  +l+ +k l +++    l +s+     +  ++k++ +++++ik++lI+H+H DH++
  EPX73713.1  25 FTLYSLGTNGGPLETDCSAHLLSDGTFREIVSIDGGGHLSALA-ELIEKKLLTVDIDERdLLQSGdgvPLNIVYAKAWLFSEQGIKTFLISHCHFDHIY 122
                 6889***************************************.9*******99987641333334644567899************************ PP

                 HHHHHGGGGGS-S.--EEEEE-HHHHHHHHHHTBSSSSB--GGGSTT-....-EEEEE--TT--EE-SSSSEEEEE...........EEEEEEE-TTT- CS
   PDEase_II  96 glvinSaefykaqlkkktivGlpytInalqkhlFNnkvWPnlpsfkrvnlislvklielepkelnkltettldvvanefsfsvkvktfevnhgslikkn 194
                 + vinSa+f+++  +++tivGl+y+In+l+kh+FNn+vWP l++++      +++++ ++   +++lt  tl+v++           f+vnhgs++  +
  EPX73713.1 123 ACVINSAMFGPQ--NPRTIVGLDYVINTLKKHIFNNQVWPALDKAG------FIDFKIISQPVYTNLT-STLSVLP-----------FPVNHGSSF--G 199
                 ***********7..8*******************************......99**************.9999999...........*********..5 PP

                 -EEEEEEEEEEETTT--EEEEE-S-----TTTS-HHHHHHHHHHHHS-GGGEEEEEEE--S-TT--HHHHTTS--HHHHHHHHHHHHHHHT-TT.TTTT CS
   PDEase_II 195 sevlSsaflftdevskesilvfgDvesdlssseslnlkiwkviaelIkrdkLkaIliEcStpkeipdeelyGHltPrllikelkqLatlststeqpllg 293
                  e++Ssafl+++++s++++++fgDve+d+++s sln+ +wkv+aelI+++kL +IliEcStp +ipd  l+GH++Pr+l+ el+ L++ ++  +  + +
  EPX73713.1 200 HELKSSAFLIRNNISDRYFIAFGDVEPDKVASDSLNIYVWKVCAELIAKKKLTHILIECSTP-DIPDALLFGHFCPRHLVDELCSLQSFVKDLGGSMDN 297
                 5*************************************************************.************************************ PP

                 -EEEEE-B---S-SS.-HHHHHHHHHHHHHHHTT---EEEE--TT CS
   PDEase_II 294 LnviveHvKsqvaedadprktileelekLkeaenlgvrisIaleG 338
                  +v+++H+Ks++++  +p   i+e+le L++  +l+v+++I ++G
  EPX73713.1 298 VTVLITHLKSHPLQAINPEVIIMEQLEALSKSCSLSVNFKIVKRG 342
                 ******************************************998 PP

>> Lactamase_B_2  Beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   1.8e-07    0.0016      30     142 ..     107     223 ..      98     234 .. 0.75

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 1.8e-07
                    SEEEEE-SS--HHHHGGGGCCCC...C--EE.EEEEEEHHHHHHCCTTCGHHHCHTT....TTEEEEEE-TTSEEEECSTTEEEEEEEE-EE--CT CS
  Lactamase_B_2  30 pidaVllthaHyDHlaglltlre...lrpkk.lplyapkgvlavleanfvylaleee....pavnvheldwgesfelgdggleitatparhksgrr 117
                     i+  l++h+H+DH+    ++     + p++  ++++ + v+ +l++++  ++  ++    ++++++ +     + l+ + l++ ++p++h+s   
     EPX73713.1 107 GIKTFLISHCHFDHIY--ACVINsamFGPQNpRTIVGLDYVINTLKKHIFNNQVWPAldkaGFIDFKIISQPVYTNLT-STLSVLPFPVNHGSSF- 198
                    678889*********4..333333576666667899999999999999655554444888899999999999999998.579***********99. PP

                    CCE-TTTSEEEEEE..CTTEEEEEESS CS
  Lactamase_B_2 118 ldrnagdtlGlrie..gggkrvyyigD 142
                       ++ +  +++i+   +++ +   gD
     EPX73713.1 199 --GHELKSSAFLIRnnISDRYFIAFGD 223
                    ..5666677777774444444555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (348 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       265  (0.0147805); expected 358.6 (0.02)
Passed bias filter:                      256  (0.0142785); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.28s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 2413.74
//
Query:       EPX73714.1  [L=387]
Description: SPRY domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-17   64.2   0.1    1.1e-16   61.1   0.1    2.1  2  SPRY      SPRY domain


Domain annotation for each model (and alignments):
>> SPRY  SPRY domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.03   5.3e+02      77      88 ..     142     153 ..     137     161 .. 0.78
   2 !   61.1   0.1     6e-21   1.1e-16       2     119 ..     168     282 ..     167     283 .. 0.90

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.03
                 TTEEEEEETTEE CS
        SPRY  77 egelsFtkngkn 88 
                   elsFtkn+++
  EPX73714.1 142 RTELSFTKNEEC 153
                 679******965 PP

  == domain 2  score: 61.1 bits;  conditional E-value: 6e-21
                 EEEEEEET.CCTSSEEEEEEEETTSSSSSTSSSTSSTTEEEEETETTEEE.EETESCEEEESSSSTTSEEEEEEETTTTEEEEEETT...EEEEEEEES CS
        SPRY   2 hyfevkiq.saeggsisvGlateqtdlsdksgegddrgswglcgdngtrt.saeqskaygkqparegdviGvalDleegelsFtkng...knlgvaFrn 95 
                 +y+e k++  +e++ +s+Gl+t++++    ++ g++  s ++ +d  +r+ sa +sk+y++  +++gdviGva+  +++ ++Ft ng    +l +++r 
  EPX73714.1 168 YYWEAKLLeVDENTTVSIGLTTKPYP--PFRMPGWNFWSLAYISDGTRRCnSAFTSKSYAS-FYQKGDVIGVAYKPKANRVFFTRNGrrcAELPCTYR- 262
                 9*******99****************..9999************88888899*********.*************************84444455555. PP

                 TTTSSEEEEEEE.STCEEEEESSE CS
        SPRY  96 vrgaelfPvvslgngaslkinlgl 119
                     +++P+v ++  + +++nlg+
  EPX73714.1 263 ----NVYPTVGATGPCVVHVNLGQ 282
                 ....68999999999999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (387 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       721  (0.0402142); expected 358.6 (0.02)
Passed bias filter:                      537  (0.0299515); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.28s 00:00:00.78 Elapsed: 00:00:00.44
# Mc/sec: 2643.26
//
Query:       EPX73715.1  [L=427]
Description: UBA/UAS domain-containing protein Ucp10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-18   65.5   0.0    7.9e-18   64.4   0.0    1.6  1  UBX       UBX domain
    0.00013   21.7   0.7     0.0003   20.5   0.7    1.6  1  UBA_4     UBA-like domain
  ------ inclusion threshold ------
      0.039   14.2   0.5      0.071   13.3   0.5    1.4  1  Rtt102p   Rtt102p-like transcription regulator protein
      0.055   12.7   8.7       0.11   11.7   8.7    1.5  1  DUF1682   Protein of unknown function (DUF1682)
        0.1   12.7   6.8       0.25   11.4   6.8    1.7  1  MAS20     MAS20 protein import receptor
       0.43   10.1  13.9       0.84    9.2  13.9    1.4  1  DDRGK     DDRGK domain
        7.7    6.9   8.5         86    3.5   0.0    2.4  2  DUF1840   Domain of unknown function (DUF1840)
        7.9    5.3   7.2         12    4.7   7.2    1.2  1  FAM178    Family of unknown function, FAM178


Domain annotation for each model (and alignments):
>> UBX  UBX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.4   0.0   3.5e-21   7.9e-18       5      80 ..     326     424 ..     322     425 .. 0.97

  Alignments for each domain:
  == domain 1  score: 64.4 bits;  conditional E-value: 3.5e-21
                 SEEEEEEEETTSTEEEEEEESSSBHHHHHHHHHHHCCCCCTS........................EEEEETTTTEEGGCCCCSBCCCC.TTTSCEEEE CS
         UBX   5 datrlqiRlpdGsrlvrrFkksdtlesvyeyVdsklfekeep........................FqLltsfPrreltksdkktLsdl.gllpnstlv 78 
                 +a+rl+iRlpdGsr  r+F+++d ++ +yeyVd+ lf ke+p                        F L++s+Pr++l      +++ l   +p++t+v
  EPX73715.1 326 KAARLSIRLPDGSRVIRKFEEDDYVKNIYEYVDTLLFAKENPeayeaamsssanitppdgyehkfqFNLYSSLPRELLVTGA--KINNLpSVFPSGTVV 422
                 689****************************************************************************996..*************** PP

                 EE CS
         UBX  79 le 80 
                 +e
  EPX73715.1 423 VE 424
                 *9 PP

>> UBA_4  UBA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.7   1.4e-07    0.0003       1      34 [.       7      40 ..       5      41 .. 0.96

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 1.4e-07
       UBA_4  1 deliaqFqaiTGadeekArqlLeannWdLerAis 34
                +e+i+ +q+   +  ++A++ Le  nW+++ A++
  EPX73715.1  7 QEAIQALQSSLDVPADTAHSVLETFNWNVQEAVN 40
                6999*****************************8 PP

>> Rtt102p  Rtt102p-like transcription regulator protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.5   3.2e-05     0.071      30      69 ..     281     320 ..     268     353 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 3.2e-05
                 ------------..---------B-S--EEEEEE-STT-. CS
     Rtt102p  30 kveessqneeasaeesneeneeekysfkyktWlksdeaeq 69 
                 k++++++++e++++e++e++ +ek s +y+ Wl ++ ++ 
  EPX73715.1 281 KQQQAKKERENKQKEEEEKERLEKLSVQYRSWLAVNIPSE 320
                 6666777777778888888999***********9997764 PP

>> DUF1682  Protein of unknown function (DUF1682)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   8.7     5e-05      0.11     236     305 ..     235     303 ..     205     310 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 5e-05
     DUF1682 236 pllklvlrliDklakraklrpevlkklkktReevekklkkeaeeekaEeaqekkeeekkkereeklakls 305
                  l +++ r   +l+ r++   e ++ +++ R + +++++   + ++++++q+kke+e k+++ee+ ++l+
  EPX73715.1 235 TLTNALARHLPSLE-RFRTEREERETARELRRQQDDAYQASLARDRQKQQQAKKERENKQKEEEEKERLE 303
                 56666666667777.99999******************99999888888887777777777776665554 PP

>> MAS20  MAS20 protein import receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   6.8   0.00011      0.25      18      54 ..     264     303 ..     262     324 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00011
       MAS20  18 kRrsdpefkkklrerrkkqakaakeeeeaekaekkk...k 54 
                 +R++d +++ +l ++r+kq++a+ke+e+++k+e++k   +
  EPX73715.1 264 RRQQDDAYQASLARDRQKQQQAKKERENKQKEEEEKerlE 303
                 799*****************99888888887777764331 PP

>> DDRGK  DDRGK domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2  13.9   0.00038      0.84      16      71 ..     249     303 ..     236     321 .. 0.64

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00038
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       DDRGK  16 kkrqqreaeeeereerkkleekreeerkekeekeeekekkkeeeerkkeeekerke 71 
                 + r +re  e  re r+++++ +++    ++ ++++++kk+ e+++k+eeeker e
  EPX73715.1 249 RFRTEREERETARELRRQQDDAYQASLARDR-QKQQQAKKERENKQKEEEEKERLE 303
                 5578888888889988888888855555444.444444444444555555555443 PP

>> DUF1840  Domain of unknown function (DUF1840)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0     0.038        86      11      74 ..     205     268 ..     196     275 .. 0.80
   2 ?    2.7   7.2      0.07   1.6e+02      50      90 ..     272     312 ..     269     317 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.038
     DUF1840  11 advimfedvakqllkllgkslterGaitaedlpaaiakLeaaiaaekaeeaeeeeeeeeeekee 74 
                 a ++m++++ ++l+ +++ +++  +a+ ++ l +a+a+    +++ ++e++e+e+ +e +++++
  EPX73715.1 205 AVLVMYSPQLSELVVAAHLHGPMDSALLQSTLTNALARHLPSLERFRTEREERETARELRRQQD 268
                 56789999999999999999*****************999999999998888888877665533 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.07
     DUF1840  50 eaaiaaekaeeaeeeeeeeeeekeeekeeeeeevsLaqRal 90 
                 +a +a+++++++++++e+e+++keee++e+ e+ s + R +
  EPX73715.1 272 QASLARDRQKQQQAKKERENKQKEEEEKERLEKLSVQYRSW 312
                 67889999999999999999999999999999999988876 PP

>> FAM178  Family of unknown function, FAM178
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   7.2    0.0056        12      12      76 ..     246     309 ..     238     319 .. 0.83

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.0056
      FAM178  12 sLdqLLkekreqrrekelekqLledvkrdllkleelesleededseekeltpehrelvekfsvss 76 
                 sL+++  e++e + ++el++q  +++ ++ l  +++++++ ++++e+k+  +e +e +ek+sv+ 
  EPX73715.1 246 SLERFRTEREERETARELRRQQDDAY-QASLARDRQKQQQAKKERENKQKEEEEKERLEKLSVQY 309
                 89999999999999999999976666.666666666888888888999999***********975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (427 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2772  (0.15461); expected 358.6 (0.02)
Passed bias filter:                     1339  (0.0746835); expected 358.6 (0.02)
Passed Vit filter:                       214  (0.011936); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.79u 0.31s 00:00:01.10 Elapsed: 00:00:00.47
# Mc/sec: 2715.58
//
Query:       EPX73716.1  [L=113]
Description: U6 snRNP-associated protein Lsm7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.2e-19   68.0   0.1      5e-19   67.8   0.1    1.1  1  LSM       LSM domain
  ------ inclusion threshold ------
      0.098   12.3   0.1       0.15   11.7   0.1    1.3  1  Hfq       Hfq protein


Domain annotation for each model (and alignments):
>> LSM  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.8   0.1   5.5e-23     5e-19       2      66 ..      27      97 ..      26      98 .. 0.96

  Alignments for each domain:
  == domain 1  score: 67.8 bits;  conditional E-value: 5.5e-23
                HHHHTTTSEEEEEETTSEEEEEEEEEEETTSEEEEEEEEEEETTET......EEEEEEEEEEEGGGEEEEE CS
         LSM  2 flkklinkkvtvelkngrelrGtLkgfDqfmNlvLedveetlkdkk......ekrklglvliRGnnivlis 66
                +l+ +++++++  +++gr++ G+Lkg+Dq mNlvL+dv e+lk+++      ++rklgl+++RG++ vl+ 
  EPX73716.1 27 DLSRYQDQRIQATFTGGRQITGVLKGYDQLMNLVLDDVDEHLKNPEdgklldKTRKLGLIVVRGTTLVLLA 97
                6899**************************************************************99975 PP

>> Hfq  Hfq protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   1.7e-05      0.15       4      40 ..      24      60 ..      22      68 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.7e-05
                HHHHHHHHCT-EEEEEETTS-EEEEEEEEE-SSEEEE CS
         Hfq  4 afLnqlrkekipvtifLvnGiklkGviksfDnftvlL 40
                ++L+  r +  +++  ++ G ++ Gv+k++D+ + l+
  EPX73716.1 24 SILDLSRYQDQRIQATFTGGRQITGVLKGYDQLMNLV 60
                57788888889999999***************98655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       296  (0.0165096); expected 358.6 (0.02)
Passed bias filter:                      275  (0.0153383); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.42
# Mc/sec: 804.07
//
Query:       EPX73717.1  [L=726]
Description: nucleoporin Nup60 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (726 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       769  (0.0428914); expected 358.6 (0.02)
Passed bias filter:                      240  (0.0133861); expected 358.6 (0.02)
Passed Vit filter:                         9  (0.00050198); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.66u 0.27s 00:00:00.93 Elapsed: 00:00:00.45
# Mc/sec: 4899.01
//
Query:       EPX73718.1  [L=1133]
Description: TRAPP complex subunit Trs130 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.6e-07   29.1   0.0    1.8e-06   27.7   0.0    1.7  1  TRAPPC10      Trafficking protein particle complex subunit 10
  ------ inclusion threshold ------
      0.017   15.4   0.5       0.16   12.3   0.0    2.5  3  TPR_12        Tetratricopeptide repeat
      0.024   14.7   0.2       0.31   11.1   0.1    2.7  2  SRP_TPR_like  Putative TPR-like repeat
      0.029   13.9   0.1      0.058   13.0   0.1    1.5  1  Foie-gras_1   Foie gras liver health family 1
       0.27   11.3   1.9       0.38   10.8   0.0    2.2  2  TPR_3         Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> TRAPPC10  Trafficking protein particle complex subunit 10, TRAPPC10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   0.0   5.1e-10   1.8e-06      28     123 ..    1015    1115 ..     987    1129 .. 0.80

  Alignments for each domain:
  == domain 1  score: 27.7 bits;  conditional E-value: 5.1e-10
    TRAPPC10   28 saeeslrvgqpislelvittsrrwesedeeea......denettklmYevvdnsdtWlvgGkkrgdfsvpvkegeshtvqlelipLkaGeLllPkVe 118 
                   a+ ++  + p s++l i t  ++e + ++         en++ +lmYe+ + ++  l +G+ r ++s     g++++ ++++i L aG+LllP++ 
  EPX73718.1 1015 MAQVDCSWKLPASISLNIPTRVQLEFMVAHMPsnnevdRENRRVELMYEISTFTNSILFAGPIRKKVSL-DGMGATIRETFTVIFLTAGRLLLPDIY 1110
                  45566666666666666666656655533322455666689****************************.899************************ PP

    TRAPPC10  119 vkkll 123 
                  v +++
  EPX73718.1 1111 VHSKD 1115
                  *9877 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       3.2   1.2e+04       9      26 ..     229     246 ..     227     256 .. 0.56
   2 ?   -0.2   0.0      0.36   1.3e+03      15      31 ..     325     341 ..     321     344 .. 0.85
   3 ?   12.3   0.0   4.5e-05      0.16      24      69 ..     455     498 ..     454     498 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 3.2
      TPR_12   9 laavlrrlgrydeAlell 26 
                 l+a + +l  y e+++ +
  EPX73718.1 229 LGASYSELSLYNESIDQF 246
                 555555555555555544 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.36
      TPR_12  15 rlgrydeAlellekale 31 
                 + ++yd++ +ll+++ +
  EPX73718.1 325 QTKNYDKSYSLLQQSFQ 341
                 7899******9999976 PP

  == domain 3  score: 12.3 bits;  conditional E-value: 4.5e-05
      TPR_12  24 ellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelle 69 
                 +l e+alei+++    +h+  ++t    + ++++lg+ye+A e+l+
  EPX73718.1 455 QLSEEALEIFKER--NNHLSFSNTASETAVVFYMLGNYEKAYEMLQ 498
                 6789******988..89************************88875 PP

>> SRP_TPR_like  Putative TPR-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   8.6e-05      0.31      61      99 ..     457     498 ..     423     509 .. 0.65
   2 ?   -0.5   0.0      0.34   1.2e+03      46      85 ..     696     736 ..     682     741 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 8.6e-05
  SRP_TPR_like  61 ykkalkilkkveaee...kvkvlksqvlYrlgsyekAYklLs 99 
                    ++al+i+k+ +++    ++   ++ v+Y+lg+yekAY++L 
    EPX73718.1 457 SEEALEIFKERNNHLsfsNTASETAVVFYMLGNYEKAYEMLQ 498
                   467777777666553111444445678899999999999883 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.34
  SRP_TPR_like  46 dvrfEkaYvlYklkkykkalkilkkveaee.kvkvlksqvl 85 
                   + rfE+a+     kk+ + +k+   +e+++ + +   sq++
    EPX73718.1 696 NDRFESAFRICFGKKFDENQKVSLTFESSNkEDQSRISQCF 736
                   55899999999999999999999999888844555667775 PP

>> Foie-gras_1  Foie gras liver health family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   1.6e-05     0.058     167     229 ..     451     519 ..     429     535 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.6e-05
  Foie-gras_1 167 kliidlLekaleeFskrkqtRlaeelsleiAeeylrlgdwkkalellqpl..tlsyr....kegWwsLl 229
                  k+ i+l e+ale F++r+ +   ++ + e A  +++lg+++ka+e+lq+    ls+     ke+W+   
   EPX73718.1 451 KMYIQLSEEALEIFKERNNHLSFSNTASETAVVFYMLGNYEKAYEMLQISslPLSWKsdpfKEKWIQFY 519
                  67789999****************************************987766776333367777665 PP

>> TPR_3  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.5         2     7e+03      13      30 ..     325     340 ..     325     341 .. 0.83
   2 ?   10.8   0.0   0.00011      0.38       8      25 ..     481     498 ..     481     501 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 2
                 HTT-HHHHHHH..HHHHH CS
       TPR_3  13 nkkkyqeArelfsYalla 30 
                 + k+y++ + l++  +++
  EPX73718.1 325 QTKNYDKSYSLLQ--QSF 340
                 579****999999..775 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00011
                 HHHHHHTT-HHHHHHH.. CS
       TPR_3   8 AaefynkkkyqeArelfs 25 
                 A +fy+ ++y++A+e ++
  EPX73718.1 481 AVVFYMLGNYEKAYEMLQ 498
                 779************988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1133 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       587  (0.0327403); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.72u 0.26s 00:00:00.98 Elapsed: 00:00:00.44
# Mc/sec: 7727.29
//
Query:       EPX73719.1  [L=68]
Description: 40S ribosomal protein S28 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.7e-33  113.0   1.6    5.2e-33  112.8   1.6    1.0  1  Ribosomal_S28e  Ribosomal protein S28e


Domain annotation for each model (and alignments):
>> Ribosomal_S28e  Ribosomal protein S28e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.8   1.6   2.9e-37   5.2e-33       2      64 .]       7      67 ..       6      67 .. 0.98

  Alignments for each domain:
  == domain 1  score: 112.8 bits;  conditional E-value: 2.9e-37
                    --EEEEEEEEEE---SSSSEEEEEEEE-S-SS-S-EEEEEEES---TT-EEEES--S--TT-- CS
  Ribosomal_S28e  2 eaklAeVikvlgrtGsrGevtqVrvellegkdkgriiiRnVkGPvreGDiLtLlEterEArrL 64
                    ++klA+VikvlgrtGsrG+vtqVrve+++++  +r+iiRnVkGPvre+DiL+LlE+erEArrL
      EPX73719.1  7 PVKLAKVIKVLGRTGSRGGVTQVRVEFMDDT--SRSIIRNVKGPVREDDILVLLESEREARRL 67
                    589***************************8..*****************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       254  (0.014167); expected 358.6 (0.02)
Passed bias filter:                      211  (0.0117686); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.26s 00:00:00.61 Elapsed: 00:00:00.41
# Mc/sec: 502.16
//
Query:       EPX73720.1  [L=1271]
Description: MutS protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.2e-74  249.0   0.0    5.5e-74  248.3   0.0    1.4  1  MutS_V       MutS domain V
    2.7e-37  128.9   0.0    6.3e-37  127.7   0.0    1.7  1  MutS_III     MutS domain III
      3e-33  114.4   0.4    8.4e-33  113.0   0.2    1.9  1  MutS_I       MutS domain I
      2e-21   76.7   0.0    6.4e-21   75.1   0.0    1.9  1  MutS_II      MutS domain II
    2.1e-17   63.2   3.0    4.1e-17   62.3   1.3    2.4  2  MutS_IV      MutS family domain IV
     0.0028   17.4   0.3      0.057   13.1   0.1    2.5  3  AAA_30       AAA domain
  ------ inclusion threshold ------
      0.026   15.1   0.0      0.073   13.6   0.0    1.8  1  ABC_tran     ABC transporter
       0.03   14.7   0.1       0.26   11.6   0.0    2.4  2  AAA_16       AAA ATPase domain
       0.09   12.3   0.0        0.2   11.2   0.0    1.5  1  AAA_27       AAA domain
       0.12   12.9   0.0       0.12   12.9   0.0    3.7  2  AAA_23       AAA domain
       0.12   12.1   0.0       0.27   11.0   0.0    1.5  1  AAA_29       P-loop containing region of AAA domain
       0.12   12.4   0.0        0.4   10.7   0.0    1.9  1  AAA_14       AAA domain
       0.25   11.3   6.4       0.86    9.6   6.4    1.9  1  Trypan_PARP  Procyclic acidic repetitive protein (PARP)


Domain annotation for each model (and alignments):
>> MutS_V  MutS domain V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  248.3   0.0     4e-77   5.5e-74       2     188 .]    1035    1223 ..    1034    1223 .. 0.96

  Alignments for each domain:
  == domain 1  score: 248.3 bits;  conditional E-value: 4e-77
                  EEE-STTSSHHHHHHHHHHHHHHHHHT--BSSSEEEEE--SEEEEEE--------SS-HHHHHHHHHHHHHTT--TTSEEEEESTS-SS-HHHHHHH CS
      MutS_V    2 litGpnmaGkstylrqvalivllaqiGsfvpaekaeisivdkiftRvgasDdlakgkstFmvEmlEtasilknatekslvilDElGRGtstydGlai 98  
                  ++tGpnmaGkst+lrqv+++v++aq+G++vpa+ a+++++d+i+tR+ga+Dd+++++stFmvE++Et++i++++  kslvilDElGRGtst dG+ai
  EPX73720.1 1035 VLTGPNMAGKSTLLRQVCVAVIMAQLGCWVPAKFARLTPMDSIHTRLGANDDIMSARSTFMVELSETKKIIEETGPKSLVILDELGRGTSTHDGHAI 1131
                  89*********************************************************************************************** PP

                  HHHHHHHHHHTT--EEEEEES-GGGGGHHHHSTTEEEEEEEEE..EETTEEEEEEEEEES--SS--HHHHHHHTT--HHHHHHHHHHHHHTT CS
      MutS_V   99 alavaeyllekikaktlfatHyheltklaekleevknlhlavk..eeeedivflykvkegaaeksyGikvaklaglPesvverArevlkele 188 
                  a+av+++l+++  +  +f+tHy++l+    k+++++ +++a++  ee+++++flyk+++g++ ksyG++va++aglPesv+++A+++ +e+e
  EPX73720.1 1132 AYAVLHHLVSNLGCLGFFSTHYQSLCIDFIKYKQIRLMQMAAAvdEERRRVTFLYKLEDGICPKSYGMNVANMAGLPESVIDAAERKSEEME 1223
                  ***************************9999999997777655338889**************************************99986 PP

>> MutS_III  MutS domain III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.7   0.0   4.6e-40   6.3e-37       1     191 []     685     978 ..     685     978 .. 0.82

  Alignments for each domain:
  == domain 1  score: 127.7 bits;  conditional E-value: 4.6e-40
                 HHHHHTTSSS-.TTS.SSSS-HHHHH---SSHHHHHHHHHHHH--BS-HHHHHHHHHHHHH.T..TT.HHHHHHHHTT---HHHHHHHHHTT---HHHH CS
                 xxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    MutS_III   1 aTlrnLeilen.lrggskegsLlgvldrTvTamGaRlLrewllqPltdleeInaRldaVee.leneelreelrellrrlpDleRllsrislgkakardl 97 
                 +Tl+nLei++n ++g +++g+L+++l r+vT++G+Rl+++wl++Pl+++  InaRld++e   +n+++r+++   +++lpDleRl+sr+++g++k++d+
  EPX73720.1 685 QTLKNLEIFSNsFDG-GDKGTLFSLLCRCVTPFGKRLFHTWLCHPLRSPVAINARLDVIELiADNPSIRDTIWGFMHKLPDLERLISRVHAGRSKPSDF 782
                 7*******9996766.88******************************************967777777777777999********************* PP

                 HHHHHHHHHHHTTTTT---SSTHHHHHHHHH..HHHHHHB-SS--SSGGGS--B-T........................................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxx........................................... RF
    MutS_III  98 kallealkaleelvallekeklaeseeesla..elleeaideeplalekegedlra........................................... 151
                  ++le ++++    ++l++e ++       a   ll+e +++++++++ e +  +                                            
  EPX73720.1 783 VRVLEGFQKISLAFQQLQSEFQDI------AkgTLLSE-LIQNAPDMQAELQSWTRafnwrkaseegvfvpepgfeaeydqsqayqtelkselnelleq 874
                 999*****9988888876665543......33345555.555555555555555555666677888888888888888888888888888888889999 PP

                 ............................................................HHHHHHHHHHHHHHHHHH....THHHHHHHHHHHHHHHH CS
                 ............................................................xxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxx RF
    MutS_III 152 ............................................................iealeqelfqelleevee....alerlrrlaealaeLDv 186
                                                                             +e+l+ ++++++++++ +    + e++++l+++ a +D+
  EPX73720.1 875 ykkqlhcsslnfkhvgkevyqvevpsdvkvpvnwckmsgtkkanryynddlrkkirklleAEELHLSIMSRMQDKFYArfdgNYEKWLALIKCTASIDC 973
                 9999999999***********************************************988444445555555555533132279*************** PP

                 HHHHH CS
                 xxxxx RF
    MutS_III 187 llSlA 191
                 ++Sl+
  EPX73720.1 974 FFSLS 978
                 ***95 PP

>> MutS_I  MutS domain I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.0   0.2   6.1e-36   8.4e-33       1     112 [.     389     506 ..     389     507 .. 0.95

  Alignments for each domain:
  == domain 1  score: 113.0 bits;  conditional E-value: 6.1e-36
                 HHHHHHHHCCCHH-TTCEEEEEETTEEEEECHHHHHHHHHCSSSSTT.ESSSSC.EEEEEEEHHHHHHHHHHHHHTT-EEEEEEE-S-HHHH....... CS
      MutS_I   1 tplmkqylelkkkykdavlffrvGdfYelfgeDAviaareleitltkrkkssekeipmagvPehalekylrkLvekgykVavveqtetpaek....... 92 
                 +p++kq++e+kk+ +d+v+ff++G+fYel+++DA i++++++++lt    ++ + ++m+g+Pe +++++++++v+kg+++a+v+q et+  k       
  EPX73720.1 389 KPFEKQFWEIKKNLMDTVVFFQKGKFYELYENDAAIGHQIFSLKLT----DRVN-MKMVGIPEASFDYWASQFVAKGFRIARVDQLETALGKemkdrqr 482
                 59********************************************....6677.*********************************9999999**99 PP

                 ....S.S--EEEEEEEBTTC-TTS CS
      MutS_I  93 ....kgvvkrevvrviTpGtltde 112
                     ++vv+r +++v+T Gtl+de
  EPX73720.1 483 tqkeEKVVQRGLTQVLTSGTLVDE 506
                 998756***************997 PP

>> MutS_II  MutS domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.1   0.0   4.6e-24   6.4e-21       2     131 ..     516     660 ..     515     668 .. 0.94

  Alignments for each domain:
  == domain 1  score: 75.1 bits;  conditional E-value: 4.6e-24
                 EEEEEEEE....TTTSEEEEEEEETTTTEEEEEEEEE...-HHHHHHHHHH-ESEEEEESS-SCCCH...HHHHHCHCTTT-EEEEESCCCCSHCCHHH CS
     MutS_II   2 ylaAisek....regrrvGlafiDlstgefvvsefed...feeleaeLsrlsPkElllpedlsesta...eeessklrelrsrvgvretvefesekase 90 
                 y++Ai+e+     +++++G++fiD+stg f+++ef+d   +++l ++L++  P+El+l+++  ++++    ++++++  ++++++  ++++++    +e
  EPX73720.1 516 YCMAIKENirfdSDEPSFGICFIDTSTGGFQLCEFTDdihRTKLDTLLTQTRPRELILEKSEVSQKSmkvIKYCVSSAAIWNFIKPSTEFWDKERVIRE 614
                 99****99999999***********************************************9999999******************************* PP

                 HCHHHB--STTTTTTT......GGG-HHHHHHHHHHHHHCCCCCSCC CS
     MutS_II  91 rleedfsvedldgfgl......ekekklalaAlgalisYleetqkek 131
                  +   + +  l+g+         + k+la +A+gal++Yl +++++k
  EPX73720.1 615 IISANYFEHGLEGT-PkvlsrvLETKELASSAFGALVWYLRQLKMDK 660
                 ******99999995.6689999899******************9983 PP

>> MutS_IV  MutS family domain IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       3.5   4.9e+03      25      54 ..     335     364 ..     333     373 .. 0.83
   2 !   62.3   1.3   2.9e-20   4.1e-17       1      91 [.     849     937 ..     849     938 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 3.5
                 CCCCCCCT-TTBEECCCSSSEEEEEE-TCC CS
     MutS_IV  25 ekereklgikslkveynkvlGyylevtrse 54 
                 ++e+++l+++ +k +++  + ++l+v   +
  EPX73720.1 335 REEKRRLRMEAFKKDNSDRYEWLLDVRDAD 364
                 68999999****************997655 PP

  == domain 2  score: 62.3 bits;  conditional E-value: 2.9e-20
                 TTSHHHHHHHHHHHHHHHHHHHHHCCCCCCCT-TTBEECCCSSSEEEEEE-TCCCTTT--SEEEEEECTCEEEEECCCHHHHHHHHHHHHH CS
     MutS_IV   1 gfdeeLdelrdrleelekeleeleekereklgikslkveynkvlGyylevtrseakkvpkefirlqtlknseryttaelkkleaelleaee 91 
                 gf++e+d++++  +el++el+el+e+++++l+++sl++++ ++  y++ev+ s+  kvp ++++++ +k+++ry++++l+k+ ++lleaee
  EPX73720.1 849 GFEAEYDQSQAYQTELKSELNELLEQYKKQLHCSSLNFKHVGKEVYQVEVP-SD-VKVPVNWCKMSGTKKANRYYNDDLRKKIRKLLEAEE 937
                 799************************************************.44.7*********************************97 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       3.4   4.7e+03     129     157 ..     804     832 ..     798     841 .. 0.81
   2 !   13.1   0.1   4.1e-05     0.057      17     103 ..    1030    1126 ..    1025    1138 .. 0.77
   3 ?    1.0   0.0      0.21   2.9e+02     102     136 ..    1219    1253 ..    1210    1260 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 3.4
      AAA_30 129 asVeaGgvlrdlveaagigtaeLtevvRq 157
                 + + +G +l++l+++a   +aeL++ +R 
  EPX73720.1 804 QDIAKGTLLSELIQNAPDMQAELQSWTRA 832
                 568999******99999999999999997 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 4.1e-05
      AAA_30   17 gdrvavltGpAGtGKttalkal.reaweaa.g....grviglAptgkaAkvLaeelgi..eastiakllkrlk...grarlepgtllivDEagmv.d 101 
                  ++ ++vltGp  +GK+t+l+++ ++++ a+ g     + + l+p      +L+++ +i  + st    l+++k   +  +  p++l+i DE g   +
  EPX73720.1 1030 TANMVVLTGPNMAGKSTLLRQVcVAVIMAQlGcwvpAKFARLTPMDSIHTRLGANDDImsARSTFMVELSETKkiiE--ETGPKSLVILDELGRGtS 1124
                  55699****************988888888789*9999***************876663344555555555557542..68899*******996435 PP

      AAA_30  102 tk 103 
                  t+
  EPX73720.1 1125 TH 1126
                  55 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.21
      AAA_30  102 tkqlaallkaaekagakvilvGDerQlasVeaGgv 136 
                  +++++a +k+ +ka   + lv D  Ql  +++G+ 
  EPX73720.1 1219 SEEMEATTKSFHKATDDIALVSDFFQLMRINEGKE 1253
                  67899999**********************99975 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   5.3e-05     0.073       2      32 ..    1022    1052 ..    1021    1059 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 5.3e-05
                  EEEEEEEETTSEEEEEESTTSSHHHHHHHHT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran    2 knvslklkegekvaivGenGaGKStLlklla 32  
                  ++vsl  k  ++v+++G+n aGKStLl+ ++
  EPX73720.1 1022 NDVSLGGKTANMVVLTGPNMAGKSTLLRQVC 1052
                  6899999999*****************9765 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0         1   1.4e+03     124     160 ..     766     805 ..     743     822 .. 0.76
   2 ?   11.6   0.0   0.00019      0.26      24      79 ..    1029    1084 ..    1020    1145 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 1
      AAA_16 124 krll.allsrderp..lvlvlDdlqwadeaslqllaaLlr 160
                  rl+ +  + +++p  +v vl+ +q++  a +ql +++ +
  EPX73720.1 766 ERLIsRVHAGRSKPsdFVRVLEGFQKISLAFQQLQSEFQD 805
                 44554333333455569********999999988666655 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 0.00019
      AAA_16   24 p..elvllsGesGvGKsslvrellralekdg.giflrgkcdqlesaipysalaqalare 79  
                     ++v+l+G+   GKs+l+r++  a+  +  g ++ +k+ +l   +p++ + + l ++
  EPX73720.1 1029 KtaNMVVLTGPNMAGKSTLLRQVCVAVIMAQlGCWVPAKFARL---TPMDSIHTRLGAN 1084
                  3369*******************98888887566699999999...9987777666544 PP

>> AAA_27  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00015       0.2      17      45 ..    1022    1050 ..    1017    1053 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00015
      AAA_27   17 rsldfsaeeadlhliyGpNEAGKstalrA 45  
                  + ++++ ++a++ ++ GpN AGKst+lr 
  EPX73720.1 1022 NDVSLGGKTANMVVLTGPNMAGKSTLLRQ 1050
                  667889999*****************985 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.6      0.27   3.7e+02     175     198 ..     829     878 ..     764     951 .. 0.61
   2 ?   12.9   0.0   8.5e-05      0.12      19      42 ..    1031    1054 ..    1019    1057 .. 0.88

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.27
      AAA_23 175 l.........................eqekekekele.eleeeleeilke 198
                 +                          q + ++ el+ el+e le+++k+
  EPX73720.1 829 WtrafnwrkaseegvfvpepgfeaeyDQSQAYQTELKsELNELLEQYKKQ 878
                 23334444555555555555554444233333333333333334443333 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 8.5e-05
      AAA_23   19 kgltlItGpNGaGKTTildAikla 42  
                   +++++tGpN aGK+T+l+ ++ a
  EPX73720.1 1031 ANMVVLTGPNMAGKSTLLRQVCVA 1054
                  5899**************988877 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0    0.0002      0.27      22      39 ..    1031    1048 ..    1019    1059 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.0002
      AAA_29   22 kgatlltGpsGsGKSTll 39  
                  +++++ltGp+ +GKSTll
  EPX73720.1 1031 ANMVVLTGPNMAGKSTLL 1048
                  45899************8 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00029       0.4       3      73 ..    1032    1119 ..    1030    1127 .. 0.55

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00029
      AAA_14    3 kilvitGaRrvGKTtllkqlikell.......vkkesilyinldderd.......kkladpekllelileklke......ekktylflDEi 73  
                  +++v+tG+  +GK+tll+q+    +       v+++      +d+ ++        ++a + +++ ++ e   +        k++++lDE 
  EPX73720.1 1032 NMVVLTGPNMAGKSTLLRQVCVAVImaqlgcwVPAKFARLTPMDSIHTrlganddIMSARS-TFMVELSET--KkiieetGPKSLVILDEL 1119
                  689****************976666666678633333333334444442222221222222.233222222..022333446778888885 PP

>> Trypan_PARP  Procyclic acidic repetitive protein (PARP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   6.4   0.00062      0.86      32     110 ..     217     292 ..     205     312 .. 0.64

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00062
  Trypan_PARP  32 edkgltkggkgkekgtkvsdddtngtdpepepepepepepepepepepetepeeepepepepepepepepepepepepe 110
                  ed   +kg + + +   v ddd     +epe+e+ p    + e+ p +e  pe++  +e + + + +    p + p+p 
   EPX73720.1 217 EDLEDVKGSRSNRRKKVVLDDDDFDEYVEPERENSPS---DDESIPAKEEVPEDDLMDEENEDMDADDSNSPLAAPKPV 292
                  4555689999986666677888888899*****9997...333444444445554444444444444444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1271 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1018  (0.0567795); expected 358.6 (0.02)
Passed bias filter:                      639  (0.0356406); expected 358.6 (0.02)
Passed Vit filter:                        71  (0.00396006); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.95u 0.30s 00:00:01.25 Elapsed: 00:00:00.47
# Mc/sec: 8132.05
//
Query:       EPX73721.1  [L=249]
Description: RNA polymerase I upstream activation factor complex subunit Spp27 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-30  104.4   0.8    2.1e-30  104.4   0.8    1.7  2  SWIB      SWIB/MDM2 domain
    2.8e-13   49.5   0.6    5.1e-13   48.7   0.6    1.4  1  DEK_C     DEK C terminal domain
  ------ inclusion threshold ------
        8.8    6.4  12.1        1.1    9.4   1.7    2.1  2  RP-C_C    Replication protein C C-terminal region


Domain annotation for each model (and alignments):
>> SWIB  SWIB/MDM2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       1.2     7e+03      50      64 ..      24      38 ..      15      46 .. 0.60
   2 !  104.4   0.8   3.6e-34   2.1e-30       2      72 ..     121     190 ..     120     192 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 1.2
        SWIB 50 kLkklfggkdrvkff 64
                + ++l+++k++v+++
  EPX73721.1 24 QVRQLLEEKKNVDLS 38
                445666666666655 PP

  == domain 2  score: 104.4 bits;  conditional E-value: 3.6e-34
        SWIB   2 pvklspeLaellgekelsrpevvkklweYIkennLqdpedkreilcDekLkklfggkdrvkffempkllkk 72 
                 p++l p+Lae+l+++++srp+ vkklweYIk+nnLqdp+dkr ilcD+kLk +f+  d++++f+m+k+l+ 
  EPX73721.1 121 PMQLDPKLAEFLNVEQMSRPQTVKKLWEYIKANNLQDPNDKRTILCDDKLKHVFNV-DNLHMFTMNKYLTS 190
                 799***************************************************76.7***********86 PP

>> DEK_C  DEK C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.7   0.6   8.6e-17   5.1e-13       4      53 ..       2      51 ..       1      52 [. 0.96

  Alignments for each domain:
  == domain 1  score: 48.7 bits;  conditional E-value: 8.6e-17
       DEK_C  4 eeirkaireiLreaDLdtvTkkkvReqLeeklgvdLsekKafIkalIdei 53
                +++r+ i++iL +++ +tv++k+vR+ Leek +vdLs+ K++++alI ++
  EPX73721.1  2 DQYRSDIKDILGTVNRQTVSAKQVRQLLEEKKNVDLSSSKKELNALILQC 51
                79*********************************************886 PP

>> RP-C_C  Replication protein C C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   1.7   0.00018       1.1      19     120 ..      31     134 ..       3     150 .. 0.60
   2 ?    2.5   3.1     0.023   1.4e+02      42      84 ..     199     243 ..     172     249 .] 0.49

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00018
      RP-C_C  19 katlaeleelleelealreevenalesalkaenssanesqnerhiqnsnpdsssese..pasekereekeaaaasaeaepsekksvplglvlkacPeia 115
                 +++  +l++  +el+al  +  + + + +++  s+a+ +++ r  +n+++  ++  +  ++s+k+++++e ++ ++++++ +  + pl+  +++ P++a
  EPX73721.1  31 EKKNVDLSSSKKELNALILQCFDETAAPQSSGGSEAKPAKKSRGSKNTEEGTAEGAKpaKKSRKRKGAEEGEDGQKKKRNVDPANNPLNRPMQLDPKLA 129
                 344444555555555555555555555555555555555666666666663333333333444444444444455555555558889999999999999 PP

      RP-C_C 116 dYapd 120
                 ++++ 
  EPX73721.1 130 EFLNV 134
                 99875 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.023
      RP-C_C  42 alesalkaenssanesqnerhiqnsnpdsssese..pasekeree 84 
                  l ++  ae+ +a+++++ +  +n+++ ++ e+e  p+++ e+e 
  EPX73721.1 199 KLPKQPAAEEPAAEKTETPENTENTENTENPEEEskPEASPEEED 243
                 445555555555555555555555554333332211333333322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1564  (0.087233); expected 358.6 (0.02)
Passed bias filter:                      548  (0.030565); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.44
# Mc/sec: 1711.48
//
Query:       EPX73722.1  [L=752]
Description: ubiquitin-protein ligase E3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-07   31.6  11.3    1.1e-07   31.6  11.3    3.6  3  zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)


Domain annotation for each model (and alignments):
>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.6  11.3     6e-12   1.1e-07       2      47 ..      78     124 ..      77     127 .. 0.94
   2 ?   -2.5   3.7      0.26   4.7e+03      20      32 ..     195     207 ..     181     215 .. 0.78
   3 ?   -2.5   5.7      0.28     5e+03      32      45 ..     263     276 ..     243     279 .. 0.73

  Alignments for each domain:
  == domain 1  score: 31.6 bits;  conditional E-value: 6e-12
                 GSB-TTTSSSBS-EEETTEEEEEE-HHHHHHHHH..TT-B-TTT--B- CS
  zf-C3HC4_3   2 deeCviClerprnvvllpCgHlvlCeeCaekllk..rkkkCpiCrrpi 47 
                 +++C iC e  + +++lpC+H  +C+ Ca +l++  ++k+C +C+ p 
  EPX73722.1  78 EQICFICAEPIAYTCILPCNHR-MCHICAIRLRAlyKTKECTFCKVPW 124
                 789*******************.*********99**********9886 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.26
                 EEEEEE-HHHHHH CS
  zf-C3HC4_3  20 CgHlvlCeeCaek 32 
                 + H ++C  C ++
  EPX73722.1 195 THHKYFCDLCINH 207
                 369999*999987 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 0.28
                 HHHHTT-B-TTT-- CS
  zf-C3HC4_3  32 kllkrkkkCpiCrr 45 
                 ++++++++C iC +
  EPX73722.1 263 HCREKHERCYICDQ 276
                 44446799999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (752 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1995  (0.111272); expected 358.6 (0.02)
Passed bias filter:                      571  (0.0318478); expected 358.6 (0.02)
Passed Vit filter:                        70  (0.00390429); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.78u 0.31s 00:00:01.09 Elapsed: 00:00:00.49
# Mc/sec: 4652.04
//
Query:       EPX73723.1  [L=134]
Description: DUF1715 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-08   34.4   5.7    2.5e-08   33.5   5.7    1.5  1  Yae1_N     Essential protein Yae1, N terminal
  ------ inclusion threshold ------
        0.1   12.9   0.2       0.29   11.4   0.0    1.9  2  Halo_GVPC  Halobacterial gas vesicle protein C (GVPC) repeat


Domain annotation for each model (and alignments):
>> Yae1_N  Essential protein Yae1, N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.5   5.7   2.8e-12   2.5e-08       1      39 []      17      55 ..      17      55 .. 0.98

  Alignments for each domain:
  == domain 1  score: 33.5 bits;  conditional E-value: 2.8e-12
      Yae1_N  1 GYreGiaeGkeqglqeGfdeGyqeGaqlGlelGqilGvl 39
                GY+eG a G +qg++e f +G+++ ++++l +G+i+G++
  EPX73723.1 17 GYDEGTAVGHQQGYEEAFLFGLEHAYEKFLLIGEIYGRV 55
                9************************************85 PP

>> Halo_GVPC  Halobacterial gas vesicle protein C (GVPC) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.2      0.77   6.9e+03      25      29 ..      30      34 ..      29      34 .. 0.84
   2 ?   11.4   0.0   3.3e-05      0.29      11      25 ..      88     102 ..      82     103 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 0.77
   Halo_GVPC 25 YadeF 29
                Y+++F
  EPX73723.1 30 YEEAF 34
                99998 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 3.3e-05
   Halo_GVPC  11 freefdatqdaFeaY 25 
                 f++e ++t+++F+aY
  EPX73723.1  88 FHNELGDTEAGFDAY 102
                 899************ PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 969.69
//
Query:       EPX73724.1  [L=109]
Description: cytochrome c [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.8e-12   47.6   0.1    4.1e-12   47.1   0.1    1.2  1  Cytochrom_C      Cytochrome c
    1.9e-07   31.3   3.3    1.6e-06   28.3   3.3    2.0  1  Cytochrome_CBB3  Cytochrome C oxidase, cbb3-type, subunit III
  ------ inclusion threshold ------
      0.018   14.7   2.4       0.12   12.0   2.4    2.2  1  Cytochrom_C550   Cytochrome c-550 domain
      0.042   14.5   0.0      0.045   14.4   0.0    1.1  1  CCP_MauG         Di-haem cytochrome c peroxidase


Domain annotation for each model (and alignments):
>> Cytochrom_C  Cytochrome c
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.1   0.1   9.1e-16   4.1e-12       2      90 ..       9     105 ..       8     107 .. 0.83

  Alignments for each domain:
  == domain 1  score: 47.1 bits;  conditional E-value: 9.1e-16
                  --HHHHHHTTGGGTB-SSSBSSS....--HHHHHHHTTT-HHHHHHHHTTSS--S..........SSHHHHHHHGGGGGGG.TT--HHHHHHHHHHHH CS
  Cytochrom_C   2 arGkelftanCaaCHgvegggakqgggptlsgaaerasaasigasvanpaavsap..........rddfekkkltaemparkerlteqeiadlaaYLk 89 
                  ++G+ lf++ Ca+CH+ve+gga++  gp+l g+  r++++ +g  +++ ++++              +++k+ ++++m   +   +++++++++ YLk
   EPX73724.1   9 KKGASLFKTRCAQCHTVEKGGAHKV-GPNLHGVFGRKTGQAEGYAYTEANRDKGItwdentlfdyLENPKKYIPGTKMAF-AGFKKPADRNNVITYLK 104
                  69*****99************9988.9**********************9999996666666665555555555555543.388899**********9 PP

                  T CS
  Cytochrom_C  90 s 90 
                  +
   EPX73724.1 105 N 105
                  7 PP

>> Cytochrome_CBB3  Cytochrome C oxidase, cbb3-type, subunit III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.3   3.3   3.6e-10   1.6e-06       3      67 .]       8     103 ..       6     103 .. 0.66

  Alignments for each domain:
  == domain 1  score: 28.3 bits;  conditional E-value: 3.6e-10
  Cytochrome_CBB3   3 aaaGaalykknCasCHg..kggag.....psla.......grdwep...................dalvdiiknGkgaMp....afggqlsdee 59 
                       ++Ga+l+k  Ca+CH+  kg  g     p+l+       g    +                    +l+d+++n k+  p    af+g  ++++
       EPX73724.1   8 EKKGASLFKTRCAQCHTveKG--GahkvgPNLHgvfgrktG----QaegyayteanrdkgitwdeNTLFDYLENPKKYIPgtkmAFAGFKKPAD 95 
                      589**************6633..333566666633332220....1233333444444444444499999999999877766668888899999 PP

  Cytochrome_CBB3  60 lwalvaYl 67 
                      ++++++Yl
       EPX73724.1  96 RNNVITYL 103
                      99999997 PP

>> Cytochrom_C550  Cytochrome c-550 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   2.4   2.8e-05      0.12      25      51 ..       7      36 ..       3     108 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.8e-05
                    HHHHHHHHHHHHTHHHHG...GGSBTTSTT CS
  Cytochrom_C550 25 qlkkgkklFeaeCaqCHv...gGktktnpn 51
                    + kkg  lF++ CaqCH+   gG+ k  pn
      EPX73724.1  7 DEKKGASLFKTRCAQCHTvekGGAHKVGPN 36
                    56899************7343566555554 PP

>> CCP_MauG  Di-haem cytochrome c peroxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0     1e-05     0.045      21      70 ..      16      67 ..       9     106 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 1e-05
                S--HHHHSGCCCTTS-SSS.SBBEG.GGEBSSS----STTGGGSSSBSTTEE CS
    CCP_MauG 21 kisCasCHdpaagftdglk.vslgv.egrlgarnaptllnaafnkglfwdgr 70
                k+ Ca+CH++++g++++     +gv ++++g+ +  + + a  +kg +wd++
  EPX73724.1 16 KTRCAQCHTVEKGGAHKVGpNLHGVfGRKTGQAEGYAYTEANRDKGITWDEN 67
                578***********99755455565555666667777777777779999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       358  (0.0199677); expected 358.6 (0.02)
Passed bias filter:                      279  (0.0155614); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.36s 00:00:00.93 Elapsed: 00:00:00.57
# Mc/sec: 575.56
//
Query:       EPX73725.1  [L=211]
Description: nucleoside 2-deoxyribosyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.8e-40  136.6   0.0      6e-40  136.3   0.0    1.1  1  Nuc_deoxyrib_tr  Nucleoside 2-deoxyribosyltransferase
  ------ inclusion threshold ------
       0.17   12.2   0.0       0.35   11.2   0.0    1.5  1  Nuc_deoxyri_tr2  Nucleoside 2-deoxyribosyltransferase like


Domain annotation for each model (and alignments):
>> Nuc_deoxyrib_tr  Nucleoside 2-deoxyribosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.3   0.0   6.7e-44     6e-40       1     131 []      17     171 ..      17     171 .. 0.99

  Alignments for each domain:
  == domain 1  score: 136.3 bits;  conditional E-value: 6.7e-44
                      EEEESGGGCSCCCHHHHHHHHHHHHTTTTEEE-CCTT-TT......--SSHHHHHHHHHHHHHC-SEEEEE--SSSS.SS--HHHHHHHHHHHH CS
  Nuc_deoxyrib_tr   1 iYLAgplvFrpdakalaarlkallaengldglaPldneaelel..paeetaraiyeadialirqaDavianldpfrg.peaDsGtafEvGyava 91 
                      +YLAg+lvFrp+a al+++lka++++ g+ g+aP+d ++e e+  p+ +t+ ai+  d++l++ +Da+i++ldpfr+ p++D+Gta+E+Gy+ a
       EPX73725.1  17 VYLAGDLVFRPNAYALFEELKAICRQVGVVGMAPFDGQEEVEDmePGIATSLAIATLDRKLMDFCDAGIFCLDPFRRgPDMDPGTAVELGYMSA 110
                      8**********************************9999999999******************************999**************** PP

                      CT-EEEEE-S-GCGHHHHHTS.....................SB.TTS.B-TTSCHCCHHC CS
  Nuc_deoxyrib_tr  92 lgkpvlayttdarelrervea.....................lrdadgllvedfglplnlM 131
                      +gkp  ++t d r++ ++v+a                     l+dadgl+v+++g+++n M
       EPX73725.1 111 QGKPLAGFTVDGRTYPQKVQAyrkdawgdelfprvskggsgsLEDADGLIVHSEGMVQNIM 171
                      ***********************************************************99 PP

>> Nuc_deoxyri_tr2  Nucleoside 2-deoxyribosyltransferase like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   3.9e-05      0.35       2     103 ..      15     117 ..      14     121 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 3.9e-05
                      EEEEEEE---SSSST-HHHHHHHHHHTSS....S-EEEEE----SS-----HHHHH.....HHHHHHHHHHHH-SEEEEEE-T....T---HHH CS
  Nuc_deoxyri_tr2   2 ksvFLaGsteseaetdWredlteaLsaip....klgvtvfnPqredwdseleedrskkrfreqvewelealekAdvvvfvfdg....edsatrs 87 
                      ++v+LaG +       +r ++ + +++ +    + gv  + P   + + e   ++  +++ ++  ++ + ++ +d+ +f +d+    +d ++ +
       EPX73725.1  15 PKVYLAGDL------VFRPNAYALFEELKaicrQVGVVGMAPFDGQEEVE-DMEPGIATSLAIATLDRKLMDFCDAGIFCLDPfrrgPDMDPGT 101
                      789999999......55555533334444455667777777776664433.4466677888899999999999**********87766779999 PP

                      HHHHHHHTTSS-EEEE CS
  Nuc_deoxyri_tr2  88 lvElglaaakgkkvvl 103
                       vElg++ a+gk++ +
       EPX73725.1 102 AVELGYMSAQGKPLAG 117
                      9***********9866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       381  (0.0212505); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.38s 00:00:00.96 Elapsed: 00:00:00.57
# Mc/sec: 1120.09
//
Query:       EPX73726.1  [L=662]
Description: acetyl-CoA ligase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.5e-85  287.3   0.0    1.8e-85  287.1   0.0    1.1  1  AMP-binding    AMP-binding enzyme
    3.1e-22   79.3   0.0    6.3e-22   78.3   0.0    1.6  1  AMP-binding_C  AMP-binding enzyme C-terminal domain
      1e-18   66.9   0.5    2.4e-18   65.8   0.1    1.8  2  ACAS_N         Acetyl-coenzyme A synthetase N-terminus


Domain annotation for each model (and alignments):
>> AMP-binding  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  287.1   0.0     3e-89   1.8e-85       2     422 ..      93     532 ..      92     533 .. 0.86

  Alignments for each domain:
  == domain 1  score: 287.1 bits;  conditional E-value: 3e-89
                  HHHHHHSTTSEEEEE....CCSTEEEEHHHHHHHHHHHHHHHHHTTSSTT-EEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS-HHHHHHHHHHHTE CS
  AMP-binding   2 eeqaaktpdkvalvd....sgegqtlTYreldervnrlAagLrslGvkkgdrVaillpnspewvvallailkaGavvvplnptltaeelayiledsea 95 
                  +++a ++p+++al++     +eg+ +TYr+l + v++ A +L slGv+kgdrVai++p+ pe ++a+la+ ++Ga++  + +++++e +   ++ds +
   EPX73726.1  93 DRHAIERPNDIALIYeadeLNEGRNITYRQLLADVSQCAGALASLGVTKGDRVAIYMPMIPETIIAMLAVIRLGAIHTIIFAGFSSESVTDRINDSSS 190
                  5778899**********99888**************************************************************************** PP

                  SEEE.....E.TCTCCC.HHHHHHHHSCC-EECEEEEESCCS-HCCHCCCHCCCCSCTTS........-TSCCCS-BTTSEEEEEEE--SSSS-EEEE CS
  AMP-binding  96 kvli.....a.tvdsel.leklleaaakleavklvivldadellkeeelkeeeeseekae........kpeeeeelkpddlayiiYTSGTTGkPKGVm 178
                  k++i     +   +++   + +++a  ++  ++l+ vl  +++++++++ ee  +   +         k ++++ ++p+++++++YTSG+TGkPKGV+
   EPX73726.1 191 KLIItcdesHrGGKRIPlKSVVNRA--YPNCPTLTNVLVFQRSPNASTAMEEGRDI--WWhdlvpkfpKYCPPAVVNPEHPLFLLYTSGSTGKPKGVV 284
                  ****988752433455533334344..45555555555555555554444444333..31346778887888889*********************** PP

                  EEH.HHHHHHHHHHHHHHCSCCTTT-EEEESS-TTSCHHHHHHHHHHHHTT-EEEE-TTCGC.CHHHHHHHHHHHHT-SEEEEEHHHHHHHHHCCCHH CS
  AMP-binding 179 lsh.rnlvanvaslkletrfklkeddvvlsilplahifglilelllallsGatvvllpkdaa.ldpklllelieklkvtviagvPrvleallesgalk 274
                  +++ ++l+ ++a++  +  f+l+++d++ +  ++ +i+g+++ ++++l+ G++  ++++++a +d  + ++++e++k t ++ +P++++ l ++g+++
   EPX73726.1 285 HTTgGYLLGAAATC--KYIFDLHPTDRMGCAGDVGWITGHTYIVYGPLMIGSATLVFEGTPAyPDYSRYWDMVERHKLTQWYIAPTAIRLLQRAGDEY 380
                  ***66666666665..5559999***************************************88877888*********************9987776 PP

                  CHHHHCCGTT-SEEEEESS-EBHHHHHHHHHHHTC...EEEEEEEEGGGSSECEECHCTTTCTSTTS-BEE-TTEEEEEE-TTTSCBEE.TTSEEEEE CS
  AMP-binding 275 aakkakdlsslrlvllggeplspellrffralfge...evlegYGlTEttgvvtvlpleedkkklgsvGkplpgvevkivDeetgepvp.dgeeGell 368
                      ++d sslr++ ++gep+ pe   ++++++g+   +v ++Y++TEt+ +++  + +    k+gs+  p+ g+++ i+D+ +g+ ++ +++eG l 
   EPX73726.1 381 ---VKHDRSSLRVLGSVGEPIAPESFMWYYNVVGQgrcAVADTYWQTETGSHIVSSMGPITPMKPGSATLPFFGIDAVIIDPLDGKVIEgNDVEGVLA 475
                  ...678****************************9*99***************765555555689******************99999757777**** PP

                  EEET..TS-SEBTT-HHHHHHHEEET.CCEEEEEEEEEEETTSEEEEEEECCCEEEE CS
  AMP-binding 369 vrgp..gvmkgYlkkpeataeafdse.grwlrTGDlgrldedGyleivgRkkdlikl 422
                  +r+   + ++  ++ +++  +++ ++ ++++ TGD +++d+dGy++i gR +d++++
   EPX73726.1 476 IRSSwpSAARTVWRGHDRFIDTYLKPyPGFYFTGDGAYRDKDGYIWIRGRVDDVVNI 532
                  **98668*******99******9976778**************************97 PP

>> AMP-binding_C  AMP-binding enzyme C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.3   0.0   1.1e-25   6.3e-22       1      76 []     541     618 ..     541     618 .. 0.93

  Alignments for each domain:
  == domain 1  score: 78.3 bits;  conditional E-value: 1.1e-25
                    HHHHHHHSSTTEEEEEEE-----TTS---EEEEEE---.---..HHHHHHHHHHHHT-TTTS-SEEEE-S---B-TTS- CS
  AMP-binding_C   1 evEsalvshpaVaeaaVvGvpdevkGealvafVvlkdg.sea..leeeLkahvrkelgpyavpkkvvfvdelpktrsGK 76 
                    e+E+al+sh+ Vae aVvG+pde++G+a+ af+ lk+g ++   le++L+  vr+++gp+a+p+k++f d lpktrsGK
     EPX73726.1 541 EIEAALISHDSVAESAVVGIPDELTGQAVNAFILLKPGvTANadLEKQLIMSVRSTIGPFATPRKLIFSD-LPKTRSGK 618
                    8***********************************99532246***********************995.*******9 PP

>> ACAS_N  Acetyl-coenzyme A synthetase N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.8   0.1     4e-22   2.4e-18       1      54 [.      35      90 ..      35      91 .. 0.98
   2 ?   -2.4   0.0      0.79   4.7e+03      11      31 ..     347     369 ..     344     380 .. 0.77

  Alignments for each domain:
  == domain 1  score: 65.8 bits;  conditional E-value: 4e-22
                HHHHHHHHHH-HHHHHHHHHCC.S--SB--S-SECSTTTC.T-EESTT-EE-HHHH CS
      ACAS_N  1 ykelykeSiedpeaFWaeqake.ldWekpfdkvldgskgp.fikWFeGGklNicyN 54
                yk++y++Si+dp +FW+++a+e ++Wekpf++v +gs ++ +++WF++G ++ cyN
  EPX73726.1 35 YKAMYEQSIRDPTTFWGKMAREiIHWEKPFETVKQGSIENaDAAWFTDGLISPCYN 90
                9************************************9988**************9 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.79
                 -HHHHHHHHHCC..S--SB--S- CS
      ACAS_N  11 dpeaFWaeqake..ldWekpfdk 31 
                 d+ ++W+ + ++   +W+  ++ 
  EPX73726.1 347 DYSRYWDMVERHklTQWYIAPTA 369
                 77889999998776678877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (662 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       406  (0.0226449); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.29s 00:00:00.94 Elapsed: 00:00:00.48
# Mc/sec: 4155.04
//
Query:       EPX73727.1  [L=165]
Description: hypothetical protein SOCG_02945 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       537  (0.0299515); expected 358.6 (0.02)
Passed bias filter:                      426  (0.0237604); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1231.23
//
Query:       EPX73728.1  [L=53]
Description: hypothetical protein SOCG_02946 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-05   24.6   0.1    1.9e-05   24.4   0.1    1.1  1  B12D      NADH-ubiquinone reductase complex 1 MLRQ subunit


Domain annotation for each model (and alignments):
>> B12D  NADH-ubiquinone reductase complex 1 MLRQ subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.1     1e-09   1.9e-05       4      36 ..      14      46 ..      11      52 .. 0.90

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 1e-09
        B12D  4 eliPLfvfigagvggavfylvRllltnPDVrwn 36
                el+PL +++ a++g a+f+l++ l+ +P+V + 
  EPX73728.1 14 ELMPLGAAVLAAAGFATFSLTKKLVADPEVFVH 46
                9*****************************875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       261  (0.0145574); expected 358.6 (0.02)
Passed bias filter:                      207  (0.0115455); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.23s 00:00:00.57 Elapsed: 00:00:00.39
# Mc/sec: 409.16
//
Query:       EPX73729.1  [L=115]
Description: Sm snRNP core protein Smd2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-17   63.2   0.5    1.7e-17   62.9   0.5    1.1  1  LSM       LSM domain


Domain annotation for each model (and alignments):
>> LSM  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.9   0.5   9.4e-22   1.7e-17       6      66 ..      38     110 ..      33     111 .. 0.95

  Alignments for each domain:
  == domain 1  score: 62.9 bits;  conditional E-value: 9.4e-22
                 TTTSEEEEEETTSEEEEEEEEEEETTSEEEEEEEEEEETTET............EEEEEEEEEEEGGGEEEEE CS
         LSM   6 linkkvtvelkngrelrGtLkgfDqfmNlvLedveetlkdkk............ekrklglvliRGnnivlis 66 
                  ++ +v+++++n+++l  ++k+fD++ NlvLe+v+e++++ k            ++r+++++++RG+ +vl++
  EPX73729.1  38 KNHDQVLINCRNNKKLLARVKAFDRHSNLVLENVKEMWTERKrnasgkkgkavnKDRFISKMFLRGDGVVLVV 110
                 5688************************************99****************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       727  (0.0405488); expected 358.6 (0.02)
Passed bias filter:                      476  (0.0265492); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 882.22
//
Query:       EPX73730.1  [L=597]
Description: serine palmitoyltransferase Lcb2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.5e-57  194.7   0.0    3.3e-57  194.3   0.0    1.1  1  Aminotran_1_2    Aminotransferase class I and II
    8.4e-05   21.7   0.0    0.00012   21.2   0.0    1.2  1  Aminotran_5      Aminotransferase class-V
    0.00031   19.6   0.0     0.0006   18.7   0.0    1.4  1  OKR_DC_1         Orn/Lys/Arg decarboxylase, major domain
  ------ inclusion threshold ------
      0.038   13.3   0.0       0.05   12.9   0.0    1.2  1  Beta_elim_lyase  Beta-eliminating lyase


Domain annotation for each model (and alignments):
>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  194.3   0.0   7.3e-61   3.3e-57       4     362 ..     184     540 ..     183     541 .. 0.94

  Alignments for each domain:
  == domain 1  score: 194.3 bits;  conditional E-value: 7.3e-61
                    EESSSSSTTSTTSS.HHHHHHHHHHHH..HHHHHTSTTST-BTTHHHHHHHHHHHHHCTCTTCHTTGGEGEEEESHHHHHHHHHHHHHHHTTT-EE CS
  Aminotran_1_2   4 inLgsneylgdsgk.ptlpevakaeke..galaggtlneygpidglpeleealakflgrseklklkreaavvvgsGagaliealifllklnpgdei 96 
                    +n +s +ylg +++  ++ ++++++ +  g++ ++  + +g++ ++ e+ee +akf+g       k+  ++++++G+g +  ++ +l+   pg+ i
     EPX73730.1 184 LNVSSYNYLGFAQShGPCAVAVEKAVRenGLSTCSASTTCGNYGIHLEVEELTAKFVG-------KPA-SLIFSQGFGTNSTVFSALMG--PGSLI 269
                    6889*********99**********999******************************.......555.*******************9..***** PP

                    EEEESS-THHHHHHHHTTSEEEEEEBEETTTTEE-HHHHHHHHTTHHCTTE.......TEEEEEEESS-TTT--B--HHHHHHHHHHHHHTTEEEE CS
  Aminotran_1_2  97 lvpdptyasyknilrlsggevvryplyseedfhldlealeealkeapegnk.......ktkvilvesphNPtGtvatleeleklldlakkynlllf 185
                    +++++++as+  + r sg+ ++ ++       h+++ +le+ l+e  ++ +        + ++++e+ +++ G  a+l+ + +l   +k+y+++lf
     EPX73730.1 270 ISDELNHASIRFGSRQSGANIRVFK-------HNNMTDLERVLREVISQGQprthrpyTKILVVIEGLYSMEGNFADLPRIMEL---KKRYKFYLF 355
                    *************************.......***************9999******888899*********************...********* PP

                    EEETTTTCBSSSS..HTHHH..HGGSTTSTTEEEEEESSSTTSSGGG-EEEEEEEHHHHHHHHHHHHHHTS.SHHHHHHHHHHHHHHHHHHH.... CS
  Aminotran_1_2 186 vDeaYagfvfgsl..davat..ranveeepnllivgslsKafGlaGeRvGyilgnaavvsqlrklsrpfls.ssllqaavaaalsdallkqs.... 272
                    +Dea+++++ g++  +   +  ++++ + + ++++g++ K+fG+aG   Gy++++ ++v+ lr    ++++  s  +a++a++ s +l++++    
     EPX73730.1 356 IDEAHSIGAIGPHggG---IcdYFGIPTTDVDILMGTFTKSFGAAG---GYVASSLEIVNKLRVTNPGYIYaESMSPAVLAQIKSSFLEIMDqspg 445
                    ***********87532...355999999988***************...**********************6666666666677777778879999 PP

                    .HHHHHHHHHHHHHHHHHHHHHHSTEEEECCS.CSSEEEEEETHHCHHHHHHHHHHTCTEEEEEGGGGTS...TTEEEEEC.TTS-HHHHHHHHHH CS
  Aminotran_1_2 273 .eleemrqrlqkrrkelrdeLaelglkvlasq.sgmflltdlsaetakelskkLleevgvyvtpgtsftv...pgrlRitv.Aglteeeleelvea 362
                        e+ +rl+ +++++r +L++lg+++++++ s +++l ++++ + +++s ++l++ gv ++ + ++ +   ++r+R+++ A++++++l+++++a
     EPX73730.1 446 sIGLERIERLAFNSRYVRLGLKRLGFIIYGNDdSPVVPLLLYNPGKINAFSHEMLKR-GVSIVVVGYPACpllTSRVRFCFsASHNKADLDYILRA 540
                    8899***************************99************************.99999999**************************9875 PP

>> Aminotran_5  Aminotransferase class-V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   2.7e-08   0.00012      46     183 ..     230     365 ..     210     417 .. 0.87

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 2.7e-08
                  HHHHHHHHHHHT-STGGGEEEESSHHHHHHHHHHHCCCC-TTTSEEEEETTSHGGGTHHHHHHHHHHTEEEEEEEBETTSCBE..GGGHHHH-..... CS
  Aminotran_5  46 eearekvaelinaeseeeiiftsGtteainlvalslarslkpgdeivvteaehhanlvpwqelakrtgakvkvipldeegeld..ldelekll..... 136
                   e++e  a++++ +    +if +G +  +++v  +l   + pg  i+  e++h + +      +++ ga+++v++ ++   l+  l   ++ +     
   EPX73730.1 230 LEVEELTAKFVGKPA--SLIFSQGFG-TNSTVFSAL---MGPGSLIISDELNHASIR----FGSRQSGANIRVFKHNNMTDLErvL---REVIsqgqp 314
                  5889999*****996..9******99.789999999...9***************99....778899********98887777444...444455556 PP

                  ...-TTEE.EEEEESBETTTTEB--HHHHHHHHHHTT-EEEEE-TTTTTTS CS
  Aminotran_5 137 ...nektk.lvaithvsnvtGtiqpveeigklakkkgalvlvDaaqavghi 183
                     ++ tk lv i    ++ G++ ++++i +l k+++ ++++D a ++g i
   EPX73730.1 315 rthRPYTKiLVVIEGLYSMEGNFADLPRIMELKKRYKFYLFIDEAHSIGAI 365
                  6555666646889999*******************************9975 PP

>> OKR_DC_1  Orn/Lys/Arg decarboxylase, major domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   1.3e-07    0.0006      65     207 ..     226     361 ..     161     364 .. 0.82

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 1.3e-07
                 BTHHHHHHHHHHHHCT-SEEEEESSHHHHHHHHHHHHH--TTEEEEEESS--HHHHHHHHHS-EEEEEE--EB-TTS-BE---GGGGSHHHHHHHHHHS CS
    OKR_DC_1  65 eGaikeaqkyaarvfgadksyfvvnGTsssnkvvlnavltpgdlvlvdRNcHKSiehalvlsgatPvylepernalgiiggidlkefeeetlkekikev 163
                  G++ e +++ a+  g   s +  +G  ++n +v  a++ pg+l++ d  +H Si  +  +sga+   +  + n++  +  + ++ + +++ +   +  
  EPX73730.1 226 YGIHLEVEELTAKFVGKPASLIFSQGF-GTNSTVFSALMGPGSLIISDELNHASIRFGSRQSGANIRVF--KHNNMTDLERVLREVISQGQPR---THR 318
                 599********************9997.6799********************************84322..3455555555555333333222...334 PP

                 TTTGSESEEEEESS-T..TSEEE-HHHHHHHHTTSESEEEEE-TT- CS
    OKR_DC_1 164 pdakaprlavitnsTY..dGvlynakeivdkleklsdrilfDeAwv 207
                 p +k    +v++ + Y   G  +++  i+++ ++++ ++++DeA+ 
  EPX73730.1 319 PYTK---ILVVIEGLYsmEGNFADLPRIMELKKRYKFYLFIDEAHS 361
                 4444...599999998556*************************95 PP

>> Beta_elim_lyase  Beta-eliminating lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   1.1e-05      0.05      36     211 ..     231     404 ..     221     550 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.1e-05
                      HHHHHHHHHTT-SEEEEES-HHHHHHHHHHHH--TTEEEEEETT-HHHHSSTTHHHHCC--EEEEE-EBTTTBE-HHHHHHHS--S-T...TS- CS
  Beta_elim_lyase  36 rLedavaelfgkeaalfvpqGtaAnsillkillqrgeevivtepahihfdetgaiaelagvklrdlknkeaGkmdlekleaaikevga...hee 126
                      ++e+ +a+ +gk a l + qG + ns  +++l+ +g+ +i +e +h   +        +g++ r +k+++    dle++ + +  +g+   h++
       EPX73730.1 231 EVEELTAKFVGKPASLIFSQGFGTNSTVFSALMGPGSLIISDELNHASIRFGS---RQSGANIRVFKHNN--MTDLERVLREVISQGQprtHRP 319
                      6789999******************************9999999998775443...33677666666666..7789998776666687899999 PP

                      EEEEEEEESSBTTTTTB---HHHHHHHHHHHHHCT-EEEEEETTHHHHHHHHTS-CHHHH....TTSSEEEEESSSTT--SS-EEEEE- CS
  Beta_elim_lyase 127 kiklisltvTnntagGqvvsleelrevaaiakkygiplhlDgARfanaakslgeivkemf....syvDsvtmslkKdllanvGgvlafr 211
                       +k++++     ++ G+   l    ++ ++ k+y+  l++D A  + a    g  + ++f      vD+++  ++K  +a  Gg +a +
       EPX73730.1 320 YTKILVVIEGLYSMEGNFADL---PRIMELKKRYKFYLFIDEAHSIGAIGPHGGGICDYFgiptTDVDILMGTFTKSFGA-AGGYVASS 404
                      999999999999888876555...55556667899999999988888887777777777666666678888888888777.67777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (597 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       378  (0.0210832); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 4141.17
//
Query:       EPX73731.1  [L=322]
Description: iron-sulfur cluster biogenesis protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00016   21.1   0.0    0.00037   19.9   0.0    1.5  1  GCV_T     Aminomethyltransferase folate-binding domain


Domain annotation for each model (and alignments):
>> GCV_T  Aminomethyltransferase folate-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   2.1e-08   0.00037      51     132 ..      33     120 ..      29     132 .. 0.78

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 2.1e-08
       GCV_T  51 ievsGpdaaalLqrlltndisklkpgkatytlllnedGgvidDlivarld.........edefllvvnaankekdlawlekaaekkdldve 132
                 ++++Gpda+++Lq l+t+++s     k  yt +ln +G+++ D +++  +          +++++ v++ ++e+ l+++ k++ + + dv+
  EPX73731.1  33 VRFEGPDAQKFLQGLTTQKVSLE---KPFYTGFLNTSGRILFDAFCYPENitttetgkpSQRLYVEVENFRTEEFLKHVIKYRLRYKCDVT 120
                 689******************44...688**************999987766666555446888888888888888887777774444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       428  (0.0238719); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 2179.04
//
Query:       EPX73732.1  [L=472]
Description: translation initiation factor eIF2B delta subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.7e-90  300.6   0.1    1.2e-89  300.2   0.1    1.1  1  IF-2B     Initiation factor 2 subunit family


Domain annotation for each model (and alignments):
>> IF-2B  Initiation factor 2 subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  300.2   0.1   6.9e-94   1.2e-89       1     281 [.     161     456 ..     161     457 .. 0.99

  Alignments for each domain:
  == domain 1  score: 300.2 bits;  conditional E-value: 6.9e-94
                 SS-SHHHHHHHHHHHHHHHHHHCCCSTHHHH....HHHHHHHHHHHHTSSTS-HHHHHHHHHHHHHHHCCTTTSSHHHHHHHHHHHHHHHHHH.HHHHH CS
       IF-2B   1 kvrGspaiaiaalevllevikdaktskvaeL....keelrkaidlLkkarPtavslgnairrllkeiselksssdvkeakksliekikelike.ieead 94 
                 kv Gs++++i++l+++++vi+d++t+ +++L    +++++++i++L ++rP+++s+g+air+l+ eis l+ + +++e k+ l+eki+++i++ i+ a 
  EPX73732.1 161 KVFGSNQRCIELLKTFKKVIRDYQTPFGTTLsrhlTTHVNSQIAYLVSTRPLSISMGSAIRFLKLEISVLDIDLTEEEGKELLLEKIDNFIRDrIVIAG 259
                 689****************************9999*********************************************************99***** PP

                 HHHHHHHHTTC-TTEEEEEES--SHHHHHHHHHHHTTEEEEEEEEEXTTTTHHHTHHHHHHHTTXEEEEEEGGGHHHHHHCTESEEEEEXSEEETTSEE CS
       IF-2B  95 ekigdiaaelikdgdtilTicnsktvlevlraaakekkkfkVivvEsrPrlqGrltakeLvqagipvtlitdsavayvmseevdkvivGAdrilenGai 193
                 ++i+++aae+i+dgd+ilT+ +s+tv++vl +a++ +k+f+Vivv+srP+++Gr ++k L+ +gi +t++++sa+ay+m+e v+k+++G +++l+nGa+
  EPX73732.1 260 KAIVQAAAEKIQDGDIILTYLHSSTVNDVLVHAKNIGKQFRVIVVDSRPEFEGRTCLKLLTSHGILCTYVMISALAYTMQE-VTKIFLGGHAMLSNGAL 357
                 *********************************************************************************.***************** PP

                 EEETTHHHHHHHHHHTTXEEEEEXXGGGBESTSSSGGGSSXXBEXTHHHHEETTEESSTT...........TEEEEEBSEEEEEGGGXSEEEETTEEEX CS
       IF-2B 194 ankiGTsslAvlAkefnipvlvvaeslkfservqldedifieerdpeellnitgeriaee...........elkvvnpafDvtPpelItliITevGvlp 281
                 ++++GTs +A+l ke+n+pv++++es+kf+er+qld+ +++e+++ ++l+n + ++ +e+           +lk++++ +DvtPp+lIt++++e+G+lp
  EPX73732.1 358 YSRAGTSLIALLGKEANVPVIACCESYKFTERIQLDSLVYNELAPGDQLINTSVDENQEKrselsdwhsvkNLKLLSLKYDVTPPRLITVCVCEMGLLP 456
                 ***************************************************9999888889***********************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (472 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1013  (0.0565006); expected 358.6 (0.02)
Passed bias filter:                      570  (0.0317921); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.28s 00:00:00.85 Elapsed: 00:00:00.42
# Mc/sec: 3347.19
//
Query:       EPX73733.1  [L=517]
Description: cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.7e-46  158.4   0.0    3.2e-46  157.5   0.0    1.5  1  Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans iso


Domain annotation for each model (and alignments):
>> Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.5   0.0   1.8e-50   3.2e-46       2     156 ..     276     424 ..     275     426 .. 0.91

  Alignments for each domain:
  == domain 1  score: 157.5 bits;  conditional E-value: 1.8e-50
  Pro_isomerase   2 vdietsskGrivieLfadkaPktvenFlklvkegfYdgttFhRvikgfmvqgGdptgktsageqekkggesiraipdEitsklkh.krGalamart 96 
                    +++ t+  G+i++eL++d aP +v nF++l k+g+Y++t+FhR i++fm+q+Gdptg+++ ge++       ++++dE+ + l+h +rG+l+ma++
     EPX73733.1 276 ARMITN-FGEINLELHTDYAPHAVYNFIQLSKKGYYRNTVFHRSIPRFMIQAGDPTGTGKGGESC-----WGKPFRDEFGNPLHHdQRGILSMANR 365
                    678897.**************************************************97755433.....22589****988888899*******9 PP

  Pro_isomerase  97 gkepnsagsqFfItlkeaphldgkytvFGkVveGmdvvekiekvetde.erpkknvkivsa 156
                    g  +n++gsqFf+ +++a+hld+k+t+FG++v Gm+v++++ekv+t++ + pk +++++++
     EPX73733.1 366 G--KNTNGSQFFLLFNAAKHLDNKHTIFGHIVGGMAVLDALEKVPTNDyDHPKVPIRLEDV 424
                    8..6********************************************9999999988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (517 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1060  (0.0591221); expected 358.6 (0.02)
Passed bias filter:                      542  (0.0302304); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.29s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 3524.40
//
Query:       EPX73734.1  [L=216]
Description: L-azetidine-2-carboxylic acid acetyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.3e-08   33.1   0.0    7.7e-08   32.6   0.0    1.2  1  Acetyltransf_1   Acetyltransferase (GNAT) family
    0.00056   20.6   0.0    0.00075   20.2   0.0    1.2  1  Acetyltransf_3   Acetyltransferase (GNAT) domain
    0.00066   20.0   0.0      0.001   19.4   0.0    1.3  1  Acetyltransf_7   Acetyltransferase (GNAT) domain
     0.0015   18.4   0.0     0.0031   17.4   0.0    1.4  1  FR47             FR47-like protein
  ------ inclusion threshold ------
       0.12   12.3   0.0        0.2   11.6   0.0    1.3  1  Acetyltransf_10  Acetyltransferase (GNAT) domain


Domain annotation for each model (and alignments):
>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.6   0.0   2.1e-11   7.7e-08      15     117 .]      57     175 ..      41     175 .. 0.76

  Alignments for each domain:
  == domain 1  score: 32.6 bits;  conditional E-value: 2.1e-11
                     HHHHHHHHHHHHHHHSTTCEEEEEEET...............TEEEEEEEEEEEETTSTTEEEEE..EEEESGGGTTSSHHHHHHHHHHHHHHHT CS
  Acetyltransf_1  15 pnedaseeefeesfsleaegllvaeed...............geliGfisllkipdekggvayie..slaVspeyrgkGlGsaLlealeeraree 92 
                     p+e++  +e +e  +l  ++ ++ e+d               ++l+Gf  ++++++   ++ +i+  +++V pe rg+G+G  L  a + +  + 
      EPX73734.1  57 PYETPLSWEEAEEYFLKYCTVICLEWDgqgplpnlqspinwkEKLLGFFIIKPNYP--SRCSHICngGFMVVPETRGRGIGGILAHAFLYFGPRI 149
                     34444444433333333444444666677778788888888899************..788888888**************************** PP

                     TE.SEEEEEEETTEHHHHHHHHHTTE CS
  Acetyltransf_1  93 gi.kkivlaveedndaairlYeklGF 117
                     g+   ++  v+++n a+ +l+ +lGF
      EPX73734.1 150 GYkSSVFNLVFATNAASYKLWDRLGF 175
                     **55554479999************9 PP

>> Acetyltransf_3  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.0   2.1e-07   0.00075      22     138 .]      48     176 ..      31     176 .. 0.84

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 2.1e-07
  Acetyltransf_3  22 pevmr...y.lpepltleeaeewlera.......waeeseeegygwaivlkdtgviGsvglrdleeedee..aelgymlapsfwgkGyateavra 103
                     +e+++   y + +pl+ eeaee++ ++       w  + +  +++  i+ k++  +G+  + +  +++ +  ++ g+m+ p+ +g+G++   ++a
      EPX73734.1  48 HEIEKgdtYpYETPLSWEEAEEYFLKYctvicleWDGQGPLPNLQSPINWKEK-LLGFFIIKPNYPSRCShiCNGGFMVVPETRGRGIGGILAHA 141
                     55554332556669***********9899999999988888889999988999.9****9998888877799*********************** PP

  Acetyltransf_3 104 lleyafeelglerlvavidkeNeaSirvleklGfe 138
                     +l +  +    + ++  + ++N aS ++  +lGf+
      EPX73734.1 142 FLYFGPRIGYKSSVFNLVFATNAASYKLWDRLGFT 176
                     *****66666667*********************6 PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   2.9e-07     0.001      12      75 ..      99     176 ..      69     177 .. 0.70

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 2.9e-07
                     TEEEEEEEEEEES....TCTEE..EEE-GGGTTSSHHHHHHHH......TTSEEE..EEEEEE...THHHHHHHHHHTTEE CS
  Acetyltransf_7  12 gkivGfialslld....aeitr..laVdpeyrgkGiGraLlea......aekgii..leqlel...naekaikfYeklGFe 75 
                     +k +Gf +++++      +i++  + V pe rg+GiG  L  a      +  g++  +   +l   ++ ++ k++ +lGF+
      EPX73734.1  99 EKLLGFFIIKPNYpsrcSHICNggFMVVPETRGRGIGGILAHAflyfgpR-IGYKssV--FNLvfaTNAASYKLWDRLGFT 176
                     56779998888889886555558899***************964555542.2332221..1223322226677*******8 PP

>> FR47  FR47-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   8.7e-07    0.0031      27      79 ..     123     177 ..     120     183 .. 0.84

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 8.7e-07
                 EEE-GGG-SSSHHHHHHHHHHHHHHHS-S-..EEEEEETT-HHHHHHHHHHT-EE CS
        FR47  27 lqvlpehrrrGlgsrlvkalakeiaergkt..vllvvvasNtpsirlyeklGfek 79 
                   v pe r+rG g+ l++a  +   + g++  v+ +v a+N +s +l+ +lGf+ 
  EPX73734.1 123 FMVVPETRGRGIGGILAHAFLYFGPRIGYKssVFNLVFATNAASYKLWDRLGFTR 177
                 5789***************999877766651166689****************86 PP

>> Acetyltransf_10  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   5.5e-05       0.2      40     115 ..      99     184 ..      95     191 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 5.5e-05
  Acetyltransf_10  40 gkivGviel.rdgs....his..llfVdpeyrgqGigkaLleaveeeaekdgikl..eltvnasp.yavpfYeklGFkavgeeqee 115
                      +k++G+  +  +      hi+   ++V pe rg+Gig  L +a +    + g+k      v a++ +  ++  +lGF+++g  +++
       EPX73734.1  99 EKLLGFFIIkPNYPsrcsHICngGFMVVPETRGRGIGGILAHAFLYFGPRIGYKSsvFNLVFATNaASYKLWDRLGFTRTGVIRNA 184
                      5666666332222233448873358********************9988888888744457788878899*********9988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       292  (0.0162865); expected 358.6 (0.02)
Passed bias filter:                      245  (0.013665); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.39u 0.22s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 1693.63
//
Query:       EPX73735.1  [L=336]
Description: flavonol reductase/cinnamoyl-CoA reductase family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.3e-18   67.4   0.2    5.3e-18   65.4   0.2    1.9  1  Epimerase        NAD dependent epimerase/dehydratase family
    5.8e-16   58.3   0.0    1.1e-15   57.5   0.0    1.3  1  3Beta_HSD        3-beta hydroxysteroid dehydrogenase/isomeras
    1.1e-15   57.8   0.1    2.6e-15   56.7   0.1    1.5  1  GDP_Man_Dehyd    GDP-mannose 4,6 dehydratase
      5e-10   39.0   0.0    1.2e-07   31.2   0.0    2.1  2  NAD_binding_4    Male sterility protein
    6.7e-09   35.9   0.0      1e-08   35.3   0.0    1.3  1  NAD_binding_10   NAD(P)H-binding
    4.4e-07   29.3   0.2    4.1e-06   26.2   0.2    2.0  2  Polysacc_synt_2  Polysaccharide biosynthesis protein
    1.1e-05   25.0   0.2    0.00061   19.3   0.0    2.3  2  adh_short        short chain dehydrogenase
     0.0019   17.8   0.1     0.0036   16.9   0.1    1.5  1  NmrA             NmrA-like family
  ------ inclusion threshold ------
       0.19   11.6   0.2        2.7    7.8   0.2    2.2  1  KR               KR domain


Domain annotation for each model (and alignments):
>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.4   0.2   2.7e-21   5.3e-18       1     229 [.       7     253 ..       7     263 .. 0.74

  Alignments for each domain:
  == domain 1  score: 65.4 bits;  conditional E-value: 2.7e-21
                 EEEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC.........EEEE--TT-HHHHHHHHHHHT-SEEEE--S---HHHHHHSHHHHHHH CS
   Epimerase   1 ilVtGatGfiGsalvkallekgyevigldrlssasntarledl.........elveldltdrsalerlfkeeqpdavihlAavggvaassedpadfiek 90 
                 +lVtG++GfiG++++  l ++gy+v g  r  ++ n+    +l          ++  d+ d  al+ ++k  ++d++ h+A    v++ +++++++++ 
  EPX73735.1   7 VLVTGVSGFIGAHVAVCLVNEGYRVRGTVRSMEKANKL--IHLnpelegkieFVIVTDIVDLPALKGAVK--GCDYICHVASPVLVDV-HDNKTELLDP 100
                 79****************************96655543..3345689**99888889999999******9..********88666666.66678999** PP

                 HTHHHHHHHHHHHHH.TCTEEEEEEEGGGGT..............SCSS.SS..BSTCSTTS--.--SSHHHHHHHHHHHHHHHHHHHH..T-EEEEEE CS
   Epimerase  91 nlqgtlnlleaarka.gvkrllflsSsevYG..............kdae.qp..keettltgpl.kpnspYaaaKlageklveayaaqy..glnaiilr 168
                  ++gtl++leaa    +vkr++  sS                   k  +  p   ee +    + + + +Y+a+K  +ek +++y ++   + ++++++
  EPX73735.1 101 AVNGTLRVLEAATSEpKVKRVVITSSFVALRnfstdpnvgynyteK--DwNPitYEEAL---TTkNGTFAYGASKKFAEKAARDYVKEKhpQYDICTIN 194
                 ************9887888888888833322566777777866431..13355466666...3347899****************9998788******* PP

                 ESEEESTT......S-TTS.TTSHHHHHHHHHHTTSSSEEEETTST-EEEEEEHHHHHHHHHHHHHHH CS
   Epimerase 169 lfnlyGpr......ngege.vsrvipalirkilegkqevtllgdgtalRdflyveDvaeaillvlehv 229
                 +  + Gp        +  + +++++  li+  + + +++  ++        ++v+D+a+a++++l++ 
  EPX73735.1 195 PPFVLGPSihpmnsMQSLStPNKIFWNLINGSQIQ-PSLQHWK--------VDVRDLANAHVFALTNE 253
                 ********844422111121222222222222222.2555554........9999******9999993 PP

>> 3Beta_HSD  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.5   0.0   5.3e-19   1.1e-15       1     231 [.       8     252 ..       8     276 .. 0.73

  Alignments for each domain:
  == domain 1  score: 57.5 bits;  conditional E-value: 5.3e-19
   3Beta_HSD   1 vvtGgaGFlGralvkeLvrlee..lkevrvlDlrespelleelskvnvkkviegDvtdkdkleealegvdvvihlaslvdvagkltedeimkvnvkGTr 97 
                 +vtG +GF+G+++   Lv+++     +vr++ ++++   l+   + +++ vi +D+ d + l+ a++g d + h+as v v  ++++ e+ +  v+GT 
  EPX73735.1   8 LVTGVSGFIGAHVAVCLVNEGYrvRGTVRSMEKANKLIHLNPELEGKIEFVIVTDIVDLPALKGAVKGCDYICHVASPVLVDVHDNKTELLDPAVNGTL 106
                 69******************9865569999999999999898889899889******************************99**************** PP

   3Beta_HSD  98 nvleacv.kagvrvlvYtSsaevvgpnslgeeil..ngd.........EeleyeslhqdaypesKalaEklvlkaNgrtlkngg.rlyTcaLRpagiyG 183
                  vlea++ +  v+++v tSs  +  + +  ++ +  n           Ee    ++ + ay  sK+ aEk+   a +  +k+   +   c + p  + G
  EPX73735.1 107 RVLEAATsEPKVKRVVITSSFVALRN-FSTDPNVgyNYTekdwnpityEEALTTKNGTFAYGASKKFAEKA---ARD-YVKEKHpQYDICTINPPFVLG 200
                 ****9872569*********966544.44444331133300010111144444444556899999999985...556.7777776889999******** PP

   3Beta_HSD 184 egdkllvpllkqlaklglalfkig.....deevlsdrvYvgNvawahilAara 231
                 +  + +  +   ++ ++ +  ++      +++  +  v v  +a ah+ A  +
  EPX73735.1 201 PSIHPMNSMQSLSTPNK-IFWNLIngsqiQPSLQHWKVDVRDLANAHVFALTN 252
                 98776554433333333.33333300010444555668899999999988754 PP

>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.7   0.1   1.3e-18   2.6e-15       1     170 [.       8     183 ..       8     194 .. 0.77

  Alignments for each domain:
  == domain 1  score: 56.7 bits;  conditional E-value: 1.3e-18
                    EEETTTSHHHHHHHHHHHHCT-CCEEEEEEESS-TTHHHHHCTTT...TTGCCEEEE.E--TT-HHHHHHHHHHHT-SEEEE--S---HHHHTTSH CS
  GDP_Man_Dehyd   1 LiTGiaGfiGsylaelLlekgyevhgivrrsssfntgriehlakdpkeeleenlklh.kgDltDssslerllaevqpdevynLAAqshVdvsfekP 95 
                    L+TG++GfiG+++a  L+++gy+v g+vr  ++   +++ hl   p  ele++++++   D+ D  +l+ +++ +  d + + A    Vdv  +k 
     EPX73735.1   8 LVTGVSGFIGAHVAVCLVNEGYRVRGTVRSMEKA--NKLIHLN--P--ELEGKIEFViVTDIVDLPALKGAVKGC--DYICHVASPVLVDVHDNK- 94 
                    9**************************9977765..5888986..4..456777765157*************98..9*************8777. PP

                    HHHHHHHTHHHHHHHHHHHHC.T........TTSEEEEEEEGGGG-S-....SSSSB-.TT..S-----SHHHHHHHHHHHHHHHHHHH CS
  GDP_Man_Dehyd  96 eytaevnvlGtlrLLeairal.gle......kkvrfyqaStsEvYGkv....qevpqt.Et..tpfyPrsPYaaaKlyadwivvnyrea 170
                     + ++  v Gtlr+Lea+ +  +++      + v +   St+   G      +  p+t E+  t  + +  Y+a+K +a+  +++y ++
     EPX73735.1  95 TELLDPAVNGTLRVLEAATSEpKVKrvvitsSFVALRNFSTDPNVGYNytekDWNPITyEEalTTKNGTFAYGASKKFAEKAARDYVKE 183
                    6778999***********97743322222223466778899988887632212345542333566678889999999999999999775 PP

>> NAD_binding_4  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.9   0.0    0.0032       6.3       1      39 [.       9      45 ..       9      58 .. 0.77
   2 !   31.2   0.0   6.1e-11   1.2e-07      85     226 ..      73     220 ..      65     244 .. 0.68

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0032
                   EE-TTSHHHHHHHHHHHHHS-.TEEEEEE-SSSHHHHHH CS
  NAD_binding_4  1 lTGaTGFLGkvLlekLLrttpevkiyllvRaksgesaee 39
                   +TG++GF+G+++   L+++    ++   vR+ ++++ + 
     EPX73735.1  9 VTGVSGFIGAHVAVCLVNEGY--RVRGTVRSMEKANKLI 45
                   7***********999999876..6777777776666555 PP

  == domain 2  score: 31.2 bits;  conditional E-value: 6.1e-11
                    HHH--EEEE--SS-..S.STTSSEEHHHHHHHHHHHHHHHTSSS--.-EEEEEEGGGTTS-TTT..--SSS-H......HHH--EEEETTTCCCHH CS
  NAD_binding_4  85 aeevdviihsaAtv..nfdepykellrvNveGtrevlelakklkklkvllhvSTayvngerege..veekvyeegekeekldederaklkglpntY 176
                    ++ +d i+h+a  v  ++ ++  ell++ v+Gt +vle a++  k k ++  S+ ++ ++ ++   v  +++e+ +++ + +e   +  k+ + +Y
     EPX73735.1  73 VKGCDYICHVASPVlvDVHDNKTELLDPAVNGTLRVLEAATSEPKVKRVVITSSFVALRNFSTDpnVGYNYTEKDWNPITYEEALTT--KNGTFAY 166
                    6789*******9761156668889******************99999******9555555554400333333333333333333333..333448* PP

                    HHHHHHHHHHHHHHHHHH---...EEEEEE-EEE-...-SSST---TTSHHHHHHH CS
  NAD_binding_4 177 eqsKalaEklvrearrrsglp...vvivRpsiitg...esktGwingsdlgirgll 226
                      sK  aEk  r++ ++ + p   ++ + p+ ++g   ++++ ++++ ++  + + 
     EPX73735.1 167 GASKKFAEKAARDYVKE-KHPqydICTINPPFVLGpsiHPMN-SMQSLSTPNKIFW 220
                    ************99977.5554559**********8775555.5555554444444 PP

>> NAD_binding_10  NAD(P)H-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.0   5.2e-12     1e-08       1     111 [.      11     139 ..      11     191 .. 0.74

  Alignments for each domain:
  == domain 1  score: 35.3 bits;  conditional E-value: 5.2e-12
                     TTTSHHHHHHHHHHHHC-T-EEEEEETTHHHCHHHH.CTTTCE.....EEE--TT-CCHHHHHHTT-SEEEES-.......--TCCHHHH..... CS
  NAD_binding_10   1 GAtGkvGrllvkellargghevtalvRnpeklaele.aeegle.....vvegdvtdvedlaealkgadaVvsal.......ggggkdeeg..... 77 
                     G +G +G +++  l+++ g++v+  vR+ ek+++l   +++le     v++ d+ d  +l+ a+kg+d ++  +          ++  ++     
      EPX73735.1  11 GVSGFIGAHVAVCLVNE-GYRVRGTVRSMEKANKLIhLNPELEgkiefVIVTDIVDLPALKGAVKGCDYICHVAspvlvdvH--DN--KTelldp 100
                     779**************.5*************97763224443444467889****************99888856666432..22..1123445 PP

                     ....HHHHHHHHHH.CT--EEEEEEETTTTSGCGCHHHH CS
  NAD_binding_10  78 ....aknivdaake.agvkRfvlvsaigvgdevpgefge 111
                         + ++++aa    +vkR+v+ s++ + ++  ++ + 
      EPX73735.1 101 avngTLRVLEAATSePKVKRVVITSSFVALRNFSTDPNV 139
                     55669999998875268**********999765554333 PP

>> Polysacc_synt_2  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   0.2     2e-09   4.1e-06       1     129 [.       7     127 ..       7     135 .. 0.82
   2 ?    1.0   0.0     0.096   1.9e+02     135     156 ..     163     184 ..     158     200 .. 0.80

  Alignments for each domain:
  == domain 1  score: 26.2 bits;  conditional E-value: 2e-09
                      EEEETTTSHHHHHHHHHHHHHB-SEEEEEES-HHHHHHHHHH......-TTEEEE....E--TT-HHHHHHHTT..T-SEEEE------HHHHH CS
  Polysacc_synt_2   1 vlvtGagGsiGselvrqilkkkpkkiillerdElklyeiekeleeelkkkklkveivpvigdvrdkerlekaleelkvdvvfhaAAlKhVPlve 94 
                      vlvtG +G iG ++   ++++  +    + + E++   i+ +   el+  k+++    +++d+ d   l+ a++  ++d++ h+A    V +  
       EPX73735.1   7 VLVTGVSGFIGAHVAVCLVNEGYRVRGTVRSMEKANKLIHLNP--ELEG-KIEFV---IVTDIVDLPALKGAVK--GCDYICHVASPVLVDVH- 91 
                      89***********999999997766666677776666665543..3344.67555...99**************..**********9999865. PP

                      HSHHHHHHHHHHHHHHHHHHHH.HTT-SEEEEEEEG CS
  Polysacc_synt_2  95 enpleaiktNvlgtenvieaai.eagvkkvvliStD 129
                       n +e ++  v gt  v+eaa+ e +vk+vv+ S+ 
       EPX73735.1  92 DNKTELLDPAVNGTLRVLEAATsEPKVKRVVITSSF 127
                      6889***************9972569******9985 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.096
                      -SHHHHHHHHHHHHHHHGGG-- CS
  Polysacc_synt_2 135 tnvmGatKrlaekllqalakes 156
                      t ++Ga+K++aek +  + ke+
       EPX73735.1 163 TFAYGASKKFAEKAARDYVKEK 184
                      6689*********998887776 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   3.1e-07   0.00061       2      70 ..       6      75 ..       5      80 .. 0.87
   2 ?    3.5   0.0     0.022        44     144     183 ..     161     199 ..     152     211 .. 0.79

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 3.1e-07
                EEEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHTTSEE.EEEE-TTTSHHHHHHHHHH CS
   adh_short  2 vvlvtGassGIGraiakelakeGakvvvvdrseekleevakelkeegaka.laiqvDvtdreevealvek 70
                 vlvtG s+ IG  +a  l++eG++v  + rs ek+++++    e++ k+ ++i +D+ d  +++ +v+ 
  EPX73735.1  6 LVLVTGVSGFIGAHVAVCLVNEGYRVRGTVRSMEKANKLIHLNPELEGKIeFVIVTDIVDLPALKGAVKG 75
                69************************************99999988666516688999998888888775 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.022
                 TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBS CS
   adh_short 144 agvaaYsAsKaavagltrslakelaptgirvnavaPGlvd 183
                 +g+ aY+AsK + ++ +r   ke +p+   + +++P++v 
  EPX73735.1 161 NGTFAYGASKKFAEKAARDYVKEKHPQ-YDICTINPPFVL 199
                 67789********99999999998886.678888888776 PP

>> NmrA  NmrA-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.1   1.8e-06    0.0036       1      72 [.       7      83 ..       7     137 .. 0.76

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 1.8e-06
                EEESSTTSHHHHHHHHHHHHHT-EEEEEES-S.....-SHHHHHHHHSTTEEEES-TT-HHHHHHHHTT-SEEEE-- CS
        NmrA  1 IlviGaTGrqGksvvrallkaghkvralvRdt.....kselakslkeaGvelvkgdlddkeslvealkgvdvvfsvt 72
                +lv+G +G +G++v+  l+++g++vr  vR         +l  +l+ +   ++  d+ d   l+ a+kg d +  v 
  EPX73735.1  7 VLVTGVSGFIGAHVAVCLVNEGYRVRGTVRSMekankLIHLNPELEGKIEFVIVTDIVDLPALKGAVKGCDYICHVA 83
                79*****************************9532221222335555545555999999999999999988876655 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.2    0.0014       2.7       3     139 ..       7     129 ..       6     138 .. 0.60

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0014
                 EEEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHTT-EEE.E----TT-HHHHHHHHHHHHHHSS---EEEE---------TTT- CS
          KR   3 ylitGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaelealgaeve.vvaaDvsdkdavealleeikaeeppikGvihaAgvlrdklleem 100
                 +l+tG  G +G ++a  l+++g r +  + Rs    e++++li+   +l+ ++e v+  D+ d  a++ +++ ++        + h A  +  +     
  EPX73735.1   7 VLVTGVSGFIGAHVAVCLVNEGYR-VRGTVRSM---EKANKLIHLNPELEGKIEfVIVTDIVDLPALKGAVKGCD-------YICHVASPVLVDV---- 90 
                 699999999999999999999976.44555662...233334444444455555234457777777777776665.......3555554332222.... PP

                 -HHHHHHHHTTTTHHHH.HHHHHTTTS--SEEEEEEEHHH CS
          KR 101 taedleqvlapKvkGaw.nLhelledesldffvlfSSiag 139
                   ++ +++l p v+G+  +L+ ++++ +++ +v++SS  +
  EPX73735.1  91 -HDNKTELLDPAVNGTLrVLEAATSEPKVKRVVITSSFVA 129
                 .233346777777776414555666677777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (336 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       557  (0.031067); expected 358.6 (0.02)
Passed bias filter:                      525  (0.0292822); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.51u 0.31s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 2325.77
//
Query:       EPX73736.1  [L=170]
Description: transcription factor Pcr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-08   34.3  11.6    2.7e-08   33.8  11.6    1.2  1  bZIP_1    bZIP transcription factor
    3.8e-07   30.1  12.4    5.7e-07   29.5  12.4    1.3  1  bZIP_2    Basic region leucine zipper
  ------ inclusion threshold ------
      0.019   15.5  11.1       0.03   14.8  11.1    1.3  1  bZIP_Maf  bZIP Maf transcription factor


Domain annotation for each model (and alignments):
>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.8  11.6   4.5e-12   2.7e-08       4      63 ..      11      70 ..       8      71 .. 0.96

  Alignments for each domain:
  == domain 1  score: 33.8 bits;  conditional E-value: 4.5e-12
                XXXXXXX--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  4 lKrekrkqkNReaArrsRqRKqaeieeLerrvkaLekeNksLkseleelkkevekLkskv 63
                 Kr + +++NR+aA+++Rq+K++ i+eLe+ + a  ++ k L+  l++l+ e   Lks++
  EPX73736.1 11 EKRRRILERNRIAASKFRQKKKEWIKELEQTANAAYEQSKRLQMMLSQLQQEAFRLKSQL 70
                699999***************************************************986 PP

>> bZIP_2  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.5  12.4   9.6e-11   5.7e-07       3      54 .]       9      62 ..       7      62 .. 0.94

  Alignments for each domain:
  == domain 1  score: 29.5 bits;  conditional E-value: 9.6e-11
                XXXXXXXX..XXXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_2  3 deyrerRr..kNreAarrsRekkkakeeeleervkeLeeeNaqLrqkveqLeke 54
                de+++rR   +Nr+Aa ++R+kkk+  +ele++++   e+  +L+ +++qL++e
  EPX73736.1  9 DEEKRRRIleRNRIAASKFRQKKKEWIKELEQTANAAYEQSKRLQMMLSQLQQE 62
                7788888779******************************************98 PP

>> bZIP_Maf  bZIP Maf transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8  11.1     5e-06      0.03      25      87 ..       7      69 ..       3      74 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 5e-06
    bZIP_Maf 25 everLKqrRRrlKNrgyakscrkrrlqqkeelekekeeleeelerlqqelsrlrqekdalkrk 87
                ev + K+rR   +Nr +a + r+++ +  +ele+  + + e+ +rlq  ls l+qe  +lk++
  EPX73736.1  7 EVDEEKRRRILERNRIAASKFRQKKKEWIKELEQTANAAYEQSKRLQMMLSQLQQEAFRLKSQ 69
                555667788888*******************************************98887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1766  (0.0984996); expected 358.6 (0.02)
Passed bias filter:                      764  (0.0426125); expected 358.6 (0.02)
Passed Vit filter:                        97  (0.00541023); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 1305.26
//
Query:       EPX73737.1  [L=253]
Description: 60S ribosomal protein L8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.2e-41  140.5   5.6    5.2e-41  139.8   4.9    1.6  2  Ribosomal_L2_C  Ribosomal Proteins L2, C-terminal domain
    1.3e-15   57.1   0.1    3.1e-15   55.9   0.1    1.6  1  Ribosomal_L2    Ribosomal Proteins L2, RNA binding domain


Domain annotation for each model (and alignments):
>> Ribosomal_L2_C  Ribosomal Proteins L2, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0      0.51   4.6e+03      16      34 ..      43      61 ..      39      63 .. 0.83
   2 !  139.8   4.9   5.8e-45   5.2e-41       2     119 ..      97     221 ..      96     229 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.51
                    -BBSE-SSTTS--SSS-SS CS
  Ribosomal_L2_C 16 ivhnielkpgkggklarsa 34
                    +v  i   pg+g+ lar a
      EPX73737.1 43 VVQKIIHDPGRGAPLARVA 61
                    5778888999999999987 PP

  == domain 2  score: 139.8 bits;  conditional E-value: 5.8e-45
                     SSS-EBSSSS-TTB-BBSE-SSTTS--SSS-SSSB-EEBB-B...SSEEEEEETTS-EEEEETTSBEBES-BS-TTCTT----STTHHHHT.... CS
  Ribosomal_L2_C   2 vGnvlplknipeGtivhnielkpgkggklarsaGtyaqvvak..egkkvtvklpSgevrkvssecrAtiGvvsngehkekklgkAgrkrwl.... 90 
                     vGnvlp++++peGti  n+e+k g++g l rs+G+y+ +v++  ++ k++vklpSg++++v+s++r ++G++++g++ +k+l+kAgr++++    
      EPX73737.1  97 VGNVLPVGEMPEGTIASNVEEKSGDRGALGRSSGNYVIIVGHdvDTGKTRVKLPSGSKKVVPSAARGVVGIIAGGGRVDKPLLKAGRAYHKykvk 191
                     7*****************************************5549************************************************* PP

                     .TBS----SSSS-TTTSSS--SSSS--SSS CS
  Ribosomal_L2_C  91 .grrpkvrGvamnpvdHphGGGeGktksrk 119
                      +++pk+rGvamnpvdHphGGG+ ++++++
      EPX73737.1 192 rNCWPKTRGVAMNPVDHPHGGGNHQHVGHS 221
                     ***********************6655543 PP

>> Ribosomal_L2  Ribosomal Proteins L2, RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.9   0.1   3.4e-19   3.1e-15       6      77 .]      15      89 ..      10      89 .. 0.89

  Alignments for each domain:
  == domain 1  score: 55.9 bits;  conditional E-value: 3.4e-19
                  --BSSTT--------EE-B--S---SS--EEEEEEE--TT-SS-EEEEEETT.....TEEE..EEE--SS--SS-EE-- CS
  Ribosomal_L2  6 gritvrhrggGhkkkyrlidfkrnkekvkgkVveieyDpgRsApiAlvkyed.....gekr..yiiapeglkvGdtvvs 77
                  +++++r r+g   ++ r +df++++++++g+V++i++DpgR Ap+A+v++ +            ++a+eg+ +G+++++
    EPX73737.1 15 FQAHTRLRKG--AAQLRTLDFAERHGYIRGVVQKIIHDPGRGAPLARVAFRNpyhyrT--DveTFVATEGMYTGQFIYC 89
                  899*******..9***************************************865443..055899***********85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (253 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       269  (0.0150036); expected 358.6 (0.02)
Passed bias filter:                      224  (0.0124937); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1833.51
//
Query:       EPX73738.1  [L=339]
Description: aldose reductase YakC [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.1e-74  249.1   0.0    5.8e-74  248.9   0.0    1.0  1  Aldo_ket_red  Aldo/keto reductase family
  ------ inclusion threshold ------
       0.18   11.9   0.0       0.57   10.3   0.0    1.8  1  DpaA_N        Dipicolinate synthase subunit A N-terminal doma


Domain annotation for each model (and alignments):
>> Aldo_ket_red  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  248.9   0.0   6.5e-78   5.8e-74       1     293 [.      15     312 ..      15     313 .. 0.98

  Alignments for each domain:
  == domain 1  score: 248.9 bits;  conditional E-value: 6.5e-78
                   .EEEE-SSS-ST..TS-HHHHHHHHHHHHHTT--EEE--TT-TTTHHHHHHHHHHHH-TTTGGG-EEEEEE...--SSSTTSSSS-HHHHHHHHHHH CS
  Aldo_ket_red   1 elglGtwqlgsk.eeiskeealellrraleaGinffDtAevYgkgqseellGealkksrkkreeviiatKv...dlrdaeiksglskenireslees 93 
                   ++g+G + l+   ++ s+e  +++l ra + G++f+D++++Yg g +e+ lG+++k+  ++r e+++atK    ++ d++   + ++e+i+++l+ s
    EPX73738.1  15 PIGFGCMGLHAMyGPSSEEANQAVLTRAADIGCTFWDSSDMYGFGANEDCLGRWFKQ-TGRRNEIFLATKFgyeKKPDGSVALNNTPEHIHKALDIS 110
                   79********99999999999999*********************************.*************999999999999************** PP

                   HHHHT-S-EEEEEE-S--TTS-.HHHHHHHHHHHHHTTSEEEEEEES--HHHHHHHHHTTT--EEEEE-B-BTT...-HHHHTTHHHHHHHTT-EEE CS
  Aldo_ket_red  94 lkrLgtdyvDllllHrpdpslpsieevldaleelvkeGkiraiGvSnfsveqlekakkkkkvkivavqveynll...releeegllelckkkgvpli 187
                   lkrL+++ +Dl+++Hr   ++p ie ++++l+ lv++Gkir+iG+S+ s++ +++a   k+++++avq+ey+++    e+ e g+ ++c+++++ ++
    EPX73738.1 111 LKRLNVEFIDLYYVHRFSGETP-IETIMETLKSLVEAGKIRYIGLSECSADTIRRA--CKVYPVSAVQIEYSPFsleIERPEIGVEQACRENNITIV 204
                   **********************.*******************************99..9****************99999999************** PP

                   EBSTTGGGTTGTTTSS---SSSCCC-------..TS-HHHHHHHHHHHHHHHHTT--HHHHHHHHHTTSTT-SEEEE--SSHHHHHHHHGGGG---- CS
  Aldo_ket_red 188 aysplggGlltgkyqseedkedkeprkdlkrd..ertsknldaaeelselakehgvslaqlalryalsqpavgivipgasnieqlednldalelkls 282
                   +y plg+G+ltg y+s++d+++++ r++  r   e++ knl+++++l+++a++++v++ ql+l+++l+q  +  +ipg+++i+ le+n++a +++ls
    EPX73738.1 205 CYAPLGRGFLTGAYKSPDDFPEGDFRRNAPRYqkENFYKNLELVKKLESIAAKNNVTPGQLSLAWILAQGHNFLPIPGTKRIKYLEENFSAKDIQLS 301
                   ***************************9999999*************************************************************** PP

                   HHHHHHHHHHH CS
  Aldo_ket_red 283 eeevaeldell 293
                   +e+++e++e+ 
    EPX73738.1 302 PETFREIREAS 312
                   *******9975 PP

>> DpaA_N  Dipicolinate synthase subunit A N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   6.4e-05      0.57      57      88 ..     278     310 ..     275     312 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 6.4e-05
                 --TT-BETTTEE-BSS-SS-EE-.HHHHHTS-T CS
      DpaA_N  57 lPvpgtkdggeintpfseeklsl.eelleklkk 88 
                 lP+pgtk+ ++++ +fs+++++l  e ++++++
  EPX73738.1 278 LPIPGTKRIKYLEENFSAKDIQLsPETFREIRE 310
                 8**********************9999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (339 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       497  (0.0277205); expected 358.6 (0.02)
Passed bias filter:                      493  (0.0274974); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.36s 00:00:01.02 Elapsed: 00:00:00.58
# Mc/sec: 1752.14
//
Query:       EPX73739.1  [L=779]
Description: transcription factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      3e-30  105.1   2.7    7.2e-30  103.9   2.7    1.7  1  Fungal_trans  Fungal specific transcription factor domain


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.9   2.7     4e-34   7.2e-30       1     207 [.     233     435 ..     233     526 .. 0.84

  Alignments for each domain:
  == domain 1  score: 103.9 bits;  conditional E-value: 4e-34
  Fungal_trans   1 ldrffsnfhpqfpilhkpsflpkt...ssenssksayasplll..lailalGalfsesetkesnssltsesqefiafplraeilihedfsspssslw 92 
                   ++++f+n+   ++++h+psf +     + +nssks+ ++++l+  +++++lG lf++ +  ++ +sl +e      f+lra+ +++ ++ss+++s+ 
    EPX73739.1 233 INLYFDNVGWSCHVIHRPSFEKACldlYVQNSSKSPPQPHFLAltYMVFCLGTLFASPALVRNRKSLAHE------FYLRAQLCFDISYSSFVPSVD 323
                   689****887788*************9555555555555555566******************9999994......468****************** PP

  Fungal_trans  93 ilqsLlllelyektss...dralherhhgvavrlarslgLhrnpsyvgkkslwklweeeaesrrRlwwaaFylDktialklGrppllddsqinlpLP 186
                   ++ sL l++ y+  ++   +++ +++++g+a r+a+ +g+hr+ +  +      l++++  +rr +w    +lD+++++ lGrp+ ++++q+n++ P
    EPX73739.1 324 AVVSLILMCQYSYFCDlleRTNFAWNCIGTATRIAVAMGMHRDGEVFE------LSAFQLHMRRMIWTELLFLDRMLSMSLGRPYAISNDQTNVLPP 414
                   ***************99988****************************......*******************************99********** PP

  Fungal_trans 187 cddddlwesddaseetlvetk 207
                    +  d  +s d  ++  ++t 
    EPX73739.1 415 SNIADSSISPDSLFIPEPSTL 435
                   ****99888877666666644 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (779 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       564  (0.0314574); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.74u 0.31s 00:00:01.05 Elapsed: 00:00:00.50
# Mc/sec: 4642.65
//
Query:       EPX73740.1  [L=237]
Description: hydantoin racemase family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.3e-10   41.5   0.0    1.7e-10   41.1   0.0    1.1  1  Asp_Glu_race  Asp/Glu/Hydantoin racemase
    0.00084   19.0   1.2     0.0063   16.2   1.0    2.0  2  Amdase        Arylmalonate decarboxylase


Domain annotation for each model (and alignments):
>> Asp_Glu_race  Asp/Glu/Hydantoin racemase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.1   0.0   1.9e-14   1.7e-10       1     217 [.       4     210 ..       4     215 .. 0.81

  Alignments for each domain:
  == domain 1  score: 41.1 bits;  conditional E-value: 1.9e-14
                   EEECSCCCCHHHHHHHHHHBTTSSGGGS..EEEEE-CC.S-TCHHHHHCH.T..THH.HHHHHHHHHHCTTESEEEE--CHHHHHHHHHHHH-SSEE CS
  Asp_Glu_race   1 IGgmgpeatlsvlrklveatpaesdqehlplivlndsa.ipdrteaieeesgddpvl.klleaakkLekagadaiviaCnTahavadelqkkikiPv 95 
                   I +++p++t+++++ + +++ +++  + ++l +ln +   p ++e+      d ++  +l     + +  ++da ++aC + h ++ +l+++ + P 
    EPX73740.1   4 ILVINPNSTTEMTNNV-KKVLDSCTPHDVELQYLNGPPnGPASIESV----YDGIMSaSLVMKHLQQNPPNCDAFLVACYSDHPLVSALREAYRKPC 95 
                   66899**********9.888888889999999999998666555555....444555588888888899**************************** PP

                   EECHHHHHHHHHHHSS-EEEEEE-HHHHHCTHHHHHHHHHGT.EEE....T-CCCHHCCHCHHHH.TT-TTSHHHHHHHHHHHHHH.TTT-SEEEE- CS
  Asp_Glu_race  96 lgiveataealkatgvkkvglLgTrgtlksglyqkeleanqgievvvpseelqssvnqaiyeelk.aGevteearrailkllerla.ergadaviLG 190
                   +gi++a++ a+ +   +kv++++T+    + l ++ ++a  gi     s+++   v ++  ++l  +++  +e  + + +  +r++ + +ad++ LG
    EPX73740.1  96 IGIMQASIFAALS-LGRKVAIVTTT-KRYEPLLKSGVRA-MGI-----SDSVFAGVVSTGLTPLElESKPRSEVDALVQESSRRAIrDLDADVICLG 184
                   *******999988.78899999965.5667788888888.498.....77777777655557999777777775555555555666799******** PP

                   STTHHHHHHHHHHCC-TT.SEEEEHHH CS
  Asp_Glu_race 191 CTelplllekaealekeksvpvidptd 217
                   C  +  + +  +++ +  +vpv++ ++
    EPX73740.1 185 CAGMAHMVQVVQQAVGH-DVPVVEGAK 210
                   ***********999996.599999776 PP

>> Amdase  Arylmalonate decarboxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.0   0.0    0.0037        33     153     203 ..      61     109 ..      44     122 .. 0.74
   2 !   16.2   1.0   7.1e-07    0.0063      69     210 ..      82     226 ..      77     232 .. 0.73

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.0037
      Amdase 153 kkavaaapeadallisCGGLrtldvvreledelglpvvssalAGlwdavrl 203
                 k++ ++ p++da l++C   +  ++v++l++  ++p +   +A +++a++l
  EPX73740.1  61 KHLQQNPPNCDAFLVACY--SDHPLVSALREAYRKPCIGIMQASIFAALSL 109
                 445567889999999995..6678889999999999998888888877655 PP

  == domain 2  score: 16.2 bits;  conditional E-value: 7.1e-07
      Amdase  69 eLvarleeatgLPattmssavvealralgarRvAvata...YidevnerLvay.LeesglevaalesLdiedveavakvtaeelvelgkkavaaapead 163
                  Lv++l+ea   P+  + +a + a  +lg r+vA++t+   Y+  + + ++a  +++s ++ +  ++L   ++e+  + + ++lv+++ + + ++ +ad
  EPX73740.1  82 PLVSALREAYRKPCIGIMQASIFAALSLG-RKVAIVTTtkrYEPLLKSGVRAMgISDSVFAGVVSTGLTPLELESKPRSEVDALVQESSRRAIRDLDAD 179
                 57888888999999888887777777787.667777752224444444444332333344444555666667777778888999999999999****** PP

      Amdase 164 allisCGGLrtldvvreledelglpvvssalAGlwdavrlagldara 210
                  + + C G+  +  v++      +pvv  a+AG+  + +l++++  +
  EPX73740.1 180 VICLGCAGMAHMVQVVQQAVGHDVPVVEGAKAGIGMLTSLVQMSLFT 226
                 ********987777777777889***********9998888877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       417  (0.0232584); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 1638.85
//
Query:       EPX73741.1  [L=342]
Description: allantoicase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    9.3e-93  307.8   0.0    3.6e-47  160.0   0.0    2.1  2  Allantoicase  Allantoicase repeat


Domain annotation for each model (and alignments):
>> Allantoicase  Allantoicase repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  160.0   0.0     2e-51   3.6e-47       1     144 []      31     178 ..      31     178 .. 0.92
   2 !  146.1   0.0   3.8e-47   6.8e-43       1     144 []     200     337 ..     200     337 .. 0.90

  Alignments for each domain:
  == domain 1  score: 160.0 bits;  conditional E-value: 2e-51
  Allantoicase   1 Ggkvlaasdeffaeaenllkpepar.........gkmgdGWetrRrreegehdwviikLga.sgviegvevdtahFkgnappevsvealeleaseee 87 
                   Gg+++a+sdeffa+a+nl++++ ++         g+++dGWetrR++ ++ +dwvi k ga sg+i+g+e+dta+F gn++p+vsvea+++    + 
    EPX73741.1  31 GGQIIACSDEFFASAQNLISSSTPIrregvyvdtGAWYDGWETRRHN-PEPSDWVIAKVGAsSGRISGIEIDTAFFVGNHAPAVSVEATYSP---N- 122
                   9********************9999********99************.566*********769***************************92...2. PP

  Allantoicase  88 aeeeaelkseewkellpktklkpdkrhlfkvea..eeklthvrlniyPDGGiarlrvyG 144
                      +    ++ w+ +lp+ +++p++rhlf++e+  +e++thvrl++yPDGGiar+rvyG
    EPX73741.1 123 ---KIPDANAFWTPILPRVPCGPSQRHLFQLETptSEAYTHVRLQMYPDGGIARFRVYG 178
                   ...22245689******************887334679********************9 PP

  == domain 2  score: 146.1 bits;  conditional E-value: 3.8e-47
  Allantoicase   1 GgkvlaasdeffaeaenllkpepargkmgdGWetrRrreegehdwviikLgasgviegvevdtahFkgnappevsvealeleaseeeaeeeaelkse 97 
                   Gg v+++s+++f++++nl+ p++++ +mgdGWet+R+re+g+ dwvi+kLg++g i+ v vdt+hFkgn+p+ev +ea+++        ++    + 
    EPX73741.1 200 GGLVVQCSNQHFGRKDNLILPGRGI-NMGDGWETARSREPGHVDWVIVKLGTKGYIDDVLVDTNHFKGNYPKEVILEATDSP-------DHVPSPDC 288
                   99*****************777777.*****************************************************992.......23335688 PP

  Allantoicase  98 ewkellpktklkpdkrhlfkve.a.eeklthvrlniyPDGGiarlrvyG 144
                   +w+ +lp++kl+p+ +h+f+   + +++ th+r+ i+PDGG++rlrv G
    EPX73741.1 289 TWEVILPAHKLGPHMEHAFSDLeNvSTPKTHIRMIIVPDGGVKRLRVCG 337
                   9******************5442335688******************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       173  (0.00964917); expected 358.6 (0.02)
Passed bias filter:                      170  (0.00948185); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 2660.71
//
Query:       EPX73742.1  [L=232]
Description: hypothetical protein SOCG_02960 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.024   13.0   1.1      0.029   12.8   1.1    1.1  1  SID-1_RNA_chan  dsRNA-gated channel SID-1


Domain annotation for each model (and alignments):
>> SID-1_RNA_chan  dsRNA-gated channel SID-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   1.1   1.6e-06     0.029     475     540 ..      89     156 ..      44     163 .. 0.67

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.6e-06
  SID-1_RNA_chan 475 lavlglvlkp....kdfasylLaifivnlllYlvfYiimKlrsserilllalllivltlvvwavalyfff 540
                     ++  g++++     +++   +L+ + +n+  Y v+Y + K++ +e++ +  +++ ++ +v +av+++f+ 
      EPX73742.1  89 MLYPGWYKQVgrvlSNMCAAVLCTASLNVPCYSVYYFVKKVIGFEKMDK-GFFY-FVCIVNVAVFVLFWS 156
                     33333444336667778888999***********************998.4444.444555555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       545  (0.0303977); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 1802.04
//
Query:       EPX73743.1  [L=386]
Description: iron permease Fip1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-93  313.2   9.5      2e-93  312.9   9.5    1.1  1  FTR1             Iron permease FTR1 family
    0.00089   19.1   5.0     0.0077   16.0   2.1    2.5  2  Cytochrom_C_asm  Cytochrome C assembly protein
  ------ inclusion threshold ------
      0.095   12.9   1.5       0.14   12.3   0.4    1.8  2  DUF2852          Protein of unknown function (DUF2852)
          4    7.3   5.9        1.2    9.0   0.1    2.8  3  COX14            Cytochrome oxidase c assembly


Domain annotation for each model (and alignments):
>> FTR1  Iron permease FTR1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  312.9   9.5   4.5e-97     2e-93       2     302 ..       8     316 ..       7     320 .. 0.96

  Alignments for each domain:
  == domain 1  score: 312.9 bits;  conditional E-value: 4.5e-97
        FTR1   2 faiflvvlregleaslivsvllallkqtqretdk............lqvwagialavllalaigqafasitaalqkdkalieeellegvlsliavvvis 88 
                 + i+++vlre+leas+ivsvl+++++qt+                 +qvw+g + a++++la+g++f+++++al+kd++  +ee++eg++sliavv+i+
  EPX73743.1   8 VPIYFIVLRETLEASIIVSVLMSFISQTLTNANGevsdpklkrrftIQVWVGSFIALFICLAVGGGFIGAFYALGKDIWGSSEEIWEGAFSLIAVVLIT 106
                 689************************8877777888999999999***************************************************** PP

        FTR1  89 wmilwmrrvgkklkeeveqklakavaeiknrekaaqkgekgsekwalfilsFlivlREGlEavLfvaaivaytvkrvsalilgvvlGaliavvlglliy 187
                 +m+++m+r +++l+e++++kl++++a      ++a ++  +s+k+a+f+l+F++vlREGlE+v+fv++++ +t+  ++a++l+vv+G+++++++g++iy
  EPX73743.1 107 VMGFAMLR-VSHLQEKWRKKLMRSIA-----NRKARGIGSWSKKYAMFLLPFFTVLREGLEVVVFVGGVGLETP--ATAFPLPVVCGLITGCLIGYFIY 197
                 ********.****************9.....446689*************************************..9********************** PP

        FTR1 188 rglvklslqsffilegflLllvaagLfsvg..tlellekaeacngkdyiefkkskslskisllslllvaflavereg...leivlaliGwantgplg.l 280
                  g++ ++lq+f+i+++++L+l++agL++++  ++e+ ++++a +g+d  e++++++++++++ + ++v++ ++e+++   ++i++a++Gw ntg++g +
  EPX73743.1 198 KGGNIMNLQWFLIASTCILYLISAGLMAKAvfYFEVDKYSRA-TGGDSAELGDGPGSYPFQQ-AIWHVNYGNPEMNSnggYMIFNAILGWMNTGTYGtI 294
                 ******************************************.*******************.************99999******************* PP

        FTR1 281 ivyaavwlvvlillgllliklg 302
                 ++y+++wl+v   + l++  ++
  EPX73743.1 295 LSYIIYWLFVTTCMMLMWWRER 316
                 ***********99999997765 PP

>> Cytochrom_C_asm  Cytochrome C assembly protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   2.1   1.7e-06    0.0077      89     186 ..      22     125 ..      17     131 .. 0.76
   2 ?    3.2   0.1     0.014        64      80     110 ..     294     324 ..     292     365 .. 0.72

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.7e-06
  Cytochrom_C_asm  89 gallsialliierqlkkkkklklsanlkllkqldrlsyriiliGfvlltigiilGsvWa..eeaWGsy.wsWDpk.et..aslitWlvfaallh 176
                        ++s+++ +i++ l++ ++   + +lk+  +++ ++ ++i + ++l   g ++G+++a  ++ WGs   +W        ++lit + fa+l +
       EPX73743.1  22 SIIVSVLMSFISQTLTNANGEVSDPKLKRRFTIQVWVGSFIALFICLAVGGGFIGAFYAlgKDIWGSSeEIWEGAfSLiaVVLITVMGFAMLRV 115
                      678999999********************************************************97525676431220023333334444444 PP

  Cytochrom_C_asm 177 sriekgwrgk 186
                      s+++++wr+k
       EPX73743.1 116 SHLQEKWRKK 125
                      4444477765 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.014
  Cytochrom_C_asm  80 llsYatliigallsialliierqlkkkkklk 110
                      +lsY ++ + + ++++l++ +++ + ++ +k
       EPX73743.1 294 ILSYIIYWLFVTTCMMLMWWRERRTAQRAQK 324
                      6899999999999999999888874433333 PP

>> DUF2852  Protein of unknown function (DUF2852)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       1.4   6.1e+03      30      54 ..     105     129 ..      98     145 .. 0.50
   2 ?   12.3   0.4   3.1e-05      0.14      13      97 ..     293     375 ..     285     385 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.4
     DUF2852  30 yllwskrlaaakaakeeveekvkel 54 
                  ++++  + ++++ +e++++k+ + 
  EPX73743.1 105 ITVMGFAMLRVSHLQEKWRKKLMRS 129
                 3344444444444444444444433 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 3.1e-05
     DUF2852  13 ivlgfilfWPlglallayllwskrlaaakaakeeveekvkelfskakrereaaraskraaassGNaaFdeyreeeLerLeeeqre 97 
                 ++l++i++W    ++++ + w++r +a++  +++ +  +++  sk ++ ++a+++++++++ss  ++F+   +e  + +eee ++
  EPX73743.1 293 TILSYIIYWLFVTTCMMLMWWRERRTAQR--AQKSAGVISSKNSKEQDLEAANSMHSTQSSSSKDSSFEIQEKEANKEIEEESKQ 375
                 699*********99999999999984333..55555566666666666666677888888999999**99999999999999874 PP

>> COX14  Cytochrome oxidase c assembly
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.38   1.7e+03      24      41 ..      97     114 ..      96     129 .. 0.60
   2 ?   -1.6   0.7      0.54   2.4e+03      18      28 ..     183     193 ..     182     203 .. 0.73
   3 ?    9.0   0.1   0.00027       1.2      27      54 ..     297     324 ..     296     326 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.38
       COX14  24 vTlyaggllvytvysygk 41 
                 ++l+a +l++++   +++
  EPX73743.1  97 FSLIAVVLITVMGFAMLR 114
                 566777776666554444 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.54
       COX14  18 VltLiGvTlya 28 
                 V +Li ++l++
  EPX73743.1 183 VCGLITGCLIG 193
                 77788777765 PP

  == domain 3  score: 9.0 bits;  conditional E-value: 0.00027
       COX14  27 yaggllvytvysygkynrkqkaeliere 54 
                 y  ++l++t  +++++ r ++++  +++
  EPX73743.1 297 YIIYWLFVTTCMMLMWWRERRTAQRAQK 324
                 779*******************444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (386 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1929  (0.107591); expected 358.6 (0.02)
Passed bias filter:                      795  (0.0443416); expected 358.6 (0.02)
Passed Vit filter:                        97  (0.00541023); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.63u 0.29s 00:00:00.92 Elapsed: 00:00:00.42
# Mc/sec: 2754.78
//
Query:       EPX73744.1  [L=607]
Description: iron transport multicopper oxidase Fio1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-45  155.4   5.7    4.9e-40  137.2   0.6    3.3  3  Cu-oxidase    Multicopper oxidase
    2.2e-42  144.1  10.6    1.3e-39  135.1   1.4    3.1  3  Cu-oxidase_2  Multicopper oxidase
    2.5e-36  124.3   7.8    3.4e-35  120.6   1.5    3.5  4  Cu-oxidase_3  Multicopper oxidase


Domain annotation for each model (and alignments):
>> Cu-oxidase  Multicopper oxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.0   0.00046       2.8     108     153 ..     101     142 ..      91     147 .. 0.80
   2 !  137.2   0.6   8.2e-44   4.9e-40       1     158 [.     154     302 ..     154     303 .. 0.95
   3 !   11.3   0.1   4.6e-05      0.27      82     149 ..     413     488 ..     336     495 .. 0.77

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00046
                 SCEEE-TTEEEEEEEEE-SSSEEEEEEEEGSSSCHHHHTTSEEEEE CS
  Cu-oxidase 108 dsldIavGqrysvlvtanqapgnYwivasgrsnlieafengtaaai 153
                 ++  I +G++y   +ta+q +g+Yw++    ++ ++ ++   ++ +
  EPX73744.1 101 TQCSIPPGSTYYYNFTADQ-TGTYWVHS---HDMSQYPDGLRTSFV 142
                 56689**************.*******9...665555565555555 PP

  == domain 2  score: 137.2 bits;  conditional E-value: 8.2e-44
                 EEEEEEEEEETCBCTTSCBC.HSSCHCHHHHHTT--SEEEETTBSS.......CTTTTSGGGEEEEETTEEEEEEEESSS-BEEEEETSB-EEEEEETC CS
  Cu-oxidase   1 eeyvitlsDwyhkdakelekellasgkapadtppvpdavlingkggfnatladkdgaslatltvepgktyrlriinvsaddslnfsIeGHkltVvevDg 99 
                 e+y+i l+Dwy ++  +l+ e++ s  +p++++pvpd+ lin              + + t+++epgktyrlr++n++a +++++ +e+H++t++evDg
  EPX73744.1 154 EDYIISLTDWYYEPFYKLVPEQFVSWHNPTGAEPVPDTGLIND-------------SINSTFKMEPGKTYRLRFVNLGAFNNYDIMLEDHNMTIIEVDG 239
                 689****************************************.............23689************************************** PP

                 ETTSEEEESCEEE-TTEEEEEEEEE-S.SSEEEEEEEE...GSSSCHHHHTTSEEEEEEEEST CS
  Cu-oxidase 100 vyvepvevdsldIavGqrysvlvtanq.apgnYwivas...grsnlieafengtaaailryse 158
                  y++p ev+s++I+++qrysvlvta++ +++nY+++a    + +++ +   n++ +a+l+y+ 
  EPX73744.1 240 IYTKPQEVSSIHITTAQRYSVLVTAKNsTDRNYAMTAYmdeSLFDQVPPNYNPNITAWLSYNS 302
                 *************************8868********9999788889999***********86 PP

  == domain 3  score: 11.3 bits;  conditional E-value: 4.6e-05
                 BEEEEETSB-EEEEEE.........TCETTS....EEEESCEEE-TTEEEEEEEEE-SSSEEEEEEEEGSSSCHHHHTTSE CS
  Cu-oxidase  82 slnfsIeGHkltVvev.........Dgvyve....pvevdsldIavGqrysvlvtanqapgnYwivasgrsnlieafengt 149
                  ++f ++GH ++V e          D + ++    p + d+++I++G+ +   + a++ pg++ ++++     + ++e g 
  EPX73744.1 413 KHPFHLHGHVFQVLERgdenageynDQTEHKvydhPIRRDTIEIHPGSFVRLRFLADN-PGAWLLHCH----IEWHMESGL 488
                 689***********999***999995555555567**********************8.******993....344445554 PP

>> Cu-oxidase_2  Multicopper oxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   1.4   9.7e-06     0.058      12     134 ..      36     144 ..      25     147 .. 0.70
   2 ?   -1.8   0.0       0.4   2.4e+03      87     106 ..     196     215 ..     181     262 .. 0.77
   3 !  135.1   1.4   2.1e-43   1.3e-39       5     136 ..     365     497 ..     361     498 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 9.7e-06
                   CEEEEEEEEEEEETCCTTTSSEEEEEETTEEEEEEEEE-SSS..-EEEEESS-EEEEEEEEECCCCCCTCCSSGCCGSSCBSEEEE-TTEEEEEEEE CS
  Cu-oxidase_2  12 ltsgneeaseitngeefsentnvitlpkgevveiviqnntkl..pHPfHlHGhdfqvlgrgpgndpeedpksynlenpvrrdtvqvppggwvairfk 106
                   +++++ +++ +  +++++    ++++++g+ v+i + n+     + ++H HG      +r++g           ++  ++    ++ppg++  + f+
    EPX73744.1  36 VDKSGHPRWVMGVNNQWP--IEPLVVDYGDQVIIKMSNHLRDnrTCSLHSHGI----FQRHNGY----------MDGVPQMTQCSIPPGSTYYYNFT 116
                   444444455444455566..778999999999999999999955667777776....3444444..........222344456799*********** PP

                   S.S-EEEEEEESSHHHHHTT-EEEEEEE CS
  Cu-oxidase_2 107 adnpGvwllHCHilwHldqGmalqfvvr 134
                   ad++G + +H+H       G+ ++fv++
    EPX73744.1 117 ADQTGTYWVHSHDMSQYPDGLRTSFVIN 144
                   ************7777777777777665 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.4
                   SSCBSEEEE-TTEEEEEEEE CS
  Cu-oxidase_2  87 pvrrdtvqvppggwvairfk 106
                        t+ ++pg++ ++rf 
    EPX73744.1 196 DSINSTFKMEPGKTYRLRFV 215
                   55566777777777777765 PP

  == domain 3  score: 135.1 bits;  conditional E-value: 2.1e-43
                   SCCCCCCCEEEEEEEEEEEETCCTTTSSEEEEEETTEEEEEEEEE-SSS-EEEEESS-EEEEEEEEECC..CCCCTCCSSGC.CGSSCBSEEEE-TT CS
  Cu-oxidase_2   5 klptllqltsgneeaseitngeefsentnvitlpkgevveiviqnntklpHPfHlHGhdfqvlgrgpgn..dpeedpksynl.enpvrrdtvqvppg 98 
                   k+p l+ + s+n++++ ++++ ++++ tn++ ++++++v++vi+n+++++HPfHlHGh fqvl+rg +n  +  +d+++ ++ + p+rrdt++++pg
    EPX73744.1 365 KVPGLMIANSTNYDDY-NMKPITYGPYTNAFIFDYNQTVDVVIDNHDTGKHPFHLHGHVFQVLERGDENagE-YNDQTEHKVyDHPIRRDTIEIHPG 459
                   5666666666666665.33888999********************************************962.333333333389************ PP

                   EEEEEEEES.S-EEEEEEESSHHHHHTT-EEEEEEECH CS
  Cu-oxidase_2  99 gwvairfkadnpGvwllHCHilwHldqGmalqfvvrpd 136
                   + v++rf adnpG+wllHCHi+wH+++G++++f++ pd
    EPX73744.1 460 SFVRLRFLADNPGAWLLHCHIEWHMESGLVATFLEAPD 497
                   **********************************9986 PP

>> Cu-oxidase_3  Multicopper oxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.6   1.5   5.6e-39   3.4e-35       9     118 ..      38     147 ..      30     148 .. 0.93
   2 ?   -2.3   0.0       0.7   4.2e+03      72      72 ..     245     245 ..     195     275 .. 0.52
   3 ?    0.3   0.1      0.11   6.5e+02      30      56 ..     395     421 ..     390     433 .. 0.79
   4 !    4.5   0.0    0.0055        33      73     112 ..     454     492 ..     437     497 .. 0.86

  Alignments for each domain:
  == domain 1  score: 120.6 bits;  conditional E-value: 5.6e-39
                   CTTEESEEEEEECTSSBS-EEEEETT-EEEEEEEE-S..SS-B-EEEET--S-GG.....GSCSGGG-B-TT-EEEEEEE--S-SEEEEEEE--TTH CS
  Cu-oxidase_3   9 plggterevitvNgqfpgptievregdtvvvnvtNkl..dentsihwhGlqqrktswmDGvpgvtqcpiqpgesftyrftvkqqagtlwYhshlslq 103
                    +g++ r+v++vN+q+p   + v++gd+v+++++N+l  +++ s+h hG+ qr + +mDGvp++tqc i+pg+++ y+ft++q  gt+w hsh ++q
    EPX73744.1  38 KSGHP-RWVMGVNNQWPIEPLVVDYGDQVIIKMSNHLrdNRTCSLHSHGIFQRHNGYMDGVPQMTQCSIPPGSTYYYNFTADQ-TGTYWVHSHDMSQ 132
                   45555.9******************************877779****************************************.************* PP

                   HHTT-EEEEEEE-HH CS
  Cu-oxidase_3 104 qaaGlaGaiiiedke 118
                   + +Gl + ++i++++
    EPX73744.1 133 YPDGLRTSFVINNPN 147
                   ************987 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.7
                   G CS
  Cu-oxidase_3  72 q 72 
                   q
    EPX73744.1 245 Q 245
                   2 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 0.11
                   EEETT-EEEEEEEE-SSS-B-EEEET- CS
  Cu-oxidase_3  30 evregdtvvvnvtNkldentsihwhGl 56 
                    +++++tv v + N+ + +   h+hG 
    EPX73744.1 395 IFDYNQTVDVVIDNHDTGKHPFHLHGH 421
                   568899*********977777777774 PP

  == domain 4  score: 4.5 bits;  conditional E-value: 0.0055
                   G-B-TT-EEEEEEE--S-SEEEEEEE--TTHHHTT-EEEE CS
  Cu-oxidase_3  73 cpiqpgesftyrftvkqqagtlwYhshlslqqaaGlaGai 112
                     i pg+ ++ rf +++  g  + h h++++  +Gl+ ++
    EPX73744.1 454 IEIHPGSFVRLRFLADN-PGAWLLHCHIEWHMESGLVATF 492
                   6799*************.*************99**99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (607 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       465  (0.0259356); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 4275.52
//
Query:       EPX73745.1  [L=187]
Description: ThiJ domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.2e-08   33.5   0.0    5.5e-08   32.8   0.0    1.4  1  DJ-1_PfpI       DJ-1/PfpI family
    0.00066   19.4   0.1      0.084   12.5   0.1    2.4  1  ThiJ_like       ThiJ/PfpI family-like
  ------ inclusion threshold ------
      0.022   14.7   0.0      0.028   14.4   0.0    1.1  1  PS_pyruv_trans  Polysaccharide pyruvyl transferase


Domain annotation for each model (and alignments):
>> DJ-1_PfpI  DJ-1/PfpI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.8   0.0   9.3e-12   5.5e-08      15     110 ..      40     157 ..      34     182 .. 0.79

  Alignments for each domain:
  == domain 1  score: 32.8 bits;  conditional E-value: 9.3e-12
                 HHHHHHHHHHHTTEEEEEEESS.........TSEEEETTSEEEE-SEEGG.................GCTCCG-SEEEE--BHHHHHHHHTSHHHHHHH CS
   DJ-1_PfpI  15 Elivpvdvlkragikvdvvsvd.........keevkgsrGlkvtvdasld.................dvkaaeyDalvlpGGragperlrenekvvelv 87 
                 E+  +++vl+++g++v+ +s +             ++s+ ++  +++  d                  +++++yDa+++ GG     + + ++  +e++
  EPX73745.1  40 EVYGLFRVLQSNGFDVEFASDTgeygfdcksV---QESSTTREALNVL-DdpkstlvaklktisrlsRLDPDDYDAIIVSGGYGCYFNYSHCKDGQEFM 134
                 88999****************99998885551...3333333333332.224445667777888888999**************8889999******** PP

                 HHHHHTT-EEEEETTTHHHHHHT CS
   DJ-1_PfpI  88 kefaekgklvaaICagpqlLaaa 110
                 + +++k+k++a++  g +lL  +
  EPX73745.1 135 RAMFRKNKVIATVAEGVLLLTYT 157
                 ****************9988765 PP

>> ThiJ_like  ThiJ/PfpI family-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   0.1   1.4e-05     0.084       4     143 ..      34     159 ..      32     176 .. 0.65

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.4e-05
   ThiJ_like   4 eGydvtevaipwkvlkdagfsveFvtekgkvpkadekllsgikakllgaskeakdiYkelstleeFkeplslssesFsleeydlvllpGGsdkavrell 102
                 +G    ev   ++vl+ +gf veF++ +g+     +++ ++       +++ea ++ ++  ++   k ++  + +  + ++yd++ + GG +       
  EPX73745.1  34 TGVYYPEVYGLFRVLQSNGFDVEFASDTGEYGFDCKSVQES------STTREALNVLDDPKSTLVAKLKTISRLSRLDPDDYDAIIVSGGYGCYF---- 122
                 67777889999999999999999999999955433333322......223444444444444444444444444556667888888888888777.... PP

   ThiJ_like 103 eserlhsllveylklvkrekepskvlgaicqgvlalafakp 143
                  + +  +  +e+++ + r+   +kv+++++ gvl l+ ++ 
  EPX73745.1 123 -NYSHCKDGQEFMRAMFRK---NKVIATVAEGVLLLTYTTR 159
                 .333334456777666666...6999999999988877655 PP

>> PS_pyruv_trans  Polysaccharide pyruvyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   4.7e-06     0.028       9      80 ..      42     125 ..      41     159 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 4.7e-06
                     HHHHHHHHHTT-EEEEEESS..........TTT--HHHHHHHHHTS-GGGEE..................EEE--E....EEEE CS
  PS_pyruv_trans   9 ealvklLrelgpdaeiivlt..........pdpsetkkllkvktpilkklskvllkrlrkkdi..ddaddviivGgdgtlgndg 80 
                     ++l ++L+++g d+e+ + t           ++s t+++l+v++ ++  l+ +l+++ r + +  dd d +i++Gg+g  +n+ 
      EPX73745.1  42 YGLFRVLQSNGFDVEFASDTgeygfdcksvQESSTTREALNVLDDPKSTLVAKLKTISRLSRLdpDDYDAIIVSGGYGCYFNYS 125
                     899***********************************************9999999999999*99999999999964333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       469  (0.0261587); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 1296.60
//
Query:       EPX73746.1  [L=810]
Description: ribonucleoside reductase large subunit Cdc22 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   3.6e-184  613.1   0.0   4.5e-184  612.8   0.0    1.1  1  Ribonuc_red_lgC  Ribonucleotide reductase, barrel domain
    3.5e-23   81.4   0.0    9.8e-23   80.0   0.0    1.8  1  Ribonuc_red_lgN  Ribonucleotide reductase, all-alpha domain
      1e-15   58.1   0.0      3e-15   56.5   0.0    1.9  1  ATP-cone         ATP cone domain


Domain annotation for each model (and alignments):
>> Ribonuc_red_lgC  Ribonucleotide reductase, barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  612.8   0.0  7.5e-188  4.5e-184       1     524 []     216     737 ..     216     737 .. 0.98

  Alignments for each domain:
  == domain 1  score: 612.8 bits;  conditional E-value: 7.5e-188
                      EEE......BSS-EEEE-X..............XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXX CS
                      xxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxx RF
  Ribonuc_red_lgC   1 ssCfvlsv.edslesIletvkeaallskaggGvGlnlsklRakgslvkgtegaasGpvsfmklidavadvvkqgG.kRrGAamvylevwHpDie 92 
                      ssCf++++ +ds+e+I++t+k++a++sk++gG+G+n++++Ra+gs+++gt+g+++G+v+++++++++a++v+qgG kR+GA ++yle+wH+Di+
       EPX73746.1 216 SSCFLVTMkDDSIEGIYDTLKTCAMISKTAGGIGINMHNIRATGSYIAGTNGTSNGLVPMIRVFNNTARYVDQGGnKRPGAFAAYLEPWHADIM 309
                      8*******8999********************************************************************************** PP

                      XXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.........................XXXXXXXXXXXXXXXXXXX CS
                      xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Ribonuc_red_lgC  93 kfidaKekntgeeenrlsnlnisvgvpdlFmeavkedkdwtLfsPrtvvkleklygeefeeeyeeleekakikkkevkakeLfeeiaesawetg 186
                      +f+d++ k +g+e+ r++++++++++pdlFm++v++++ wt+f+P++++ l +++geefe  ye++e++ + ++++ +a++++ +i++s+ etg
       EPX73746.1 310 EFLDLR-KTHGKEDFRAREMFYALWIPDLFMRRVEKNEPWTFFCPNEAPGLADVWGEEFEALYEKYEKE-NRGRRQLPAQKVWYAILQSQTETG 401
                      ******.99************************************************************.55567******************* PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                      xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Ribonuc_red_lgC 187 ePgvlfkDtiNrrnvlekakggkIratNlCgEiplleyes.vavCnLasinLakfvkkdeegkkefdwdelkkviqlvvraLdnvidvnkyplp 279
                      +P++l+kD++Nr++++  ++ g+Ir++NlC+Ei+ ++ ++ vavCnLasi L++f+     ++ ++++++l++v ++v+r+L++++d+n+yp+p
       EPX73746.1 402 NPFMLYKDSCNRKSNQ--KNLGTIRCSNLCTEIMEYSAPDeVAVCNLASIALPTFI-----KDGKYNFQKLHDVAKVVTRNLNKIVDINYYPVP 488
                      ****************..999******************999**************.....35799**************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..X......XXX CS
                      xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxx RF
  Ribonuc_red_lgC 280 eiekntkktRriGlGvmgladalaklgipydseealkfarkitelltyyaykaSvelAkergpfplfekskyskgilpvdef..eekekedwee 371
                      e++k++ ++R+iGlGv+glada+++l++p++s  a k++ +i+e+++++a++aS+elA+++gp++++e+s++s+gil++d++  ++++ +dw  
       EPX73746.1 489 EARKSNFRHRPIGLGVQGLADAFFALRLPFESAGAKKLNIQIFETIYHAAVEASNELAEKNGPYESYEGSPASQGILQYDMWnvTPTDLWDWAA 582
                      **********************************************************************************7645569***** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXX CS
                      xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxx RF
  Ribonuc_red_lgC 372 LreeikkyGlrnamvtalaPTgsiSliagtssgiePifalvykksvtvgeflevnpvfeeeLkklglwseellkki...lesvqgleeipeeik 462
                      L+++++k+Gl+n+ ++a +PT+s+S+i g ++++eP+++++y+++v +gef +vnp ++++L +++lw+ee+++k+    +s+q ++eip+++k
       EPX73746.1 583 LKAKVAKHGLYNSLLVAPMPTASTSQILGFNECFEPYTSNMYQRRVLSGEFQIVNPWLLKDLVERNLWNEEMKNKLvmlDGSIQAIPEIPQDLK 676
                      ****************************************************************************988888************ PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                      xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Ribonuc_red_lgC 463 rvfktaldidqedhikaqaaiqkwidqsiSktinlpneatvedvkelyllAwklGlKgvtyY 524
                      +++kt+++i+q+ +i+ +a++ +++dqs+S++++l ++ ++ +++++++++wk+GlK+ +yY
       EPX73746.1 677 DLYKTVWEISQKTVIDYAADRGPFVDQSQSLNVHL-KDPSYGKITSMHFYGWKKGLKTGMYY 737
                      ***********************************.*************************9 PP

>> Ribonuc_red_lgN  Ribonucleotide reductase, all-alpha domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.0   0.0   1.6e-26   9.8e-23       3      82 ..     143     212 ..     141     213 .. 0.96

  Alignments for each domain:
  == domain 1  score: 80.0 bits;  conditional E-value: 1.6e-26
  Ribonuc_red_lgN   3 ltynalkvledrYllkdengeivEspqqmfmRvAlalaiaealydkleedkdlaeefydlmssqkflpasPtlmnaGtel 82 
                      ++++++k+le++Yll+ + g+++E+pq+++mRvA+++++         ed + a e+y+lms ++f++asPtl+naGt++
       EPX73746.1 143 YNFFGFKTLERSYLLRIN-GKVAERPQHLIMRVAVGIHG---------EDIEAALETYNLMSLRYFTHASPTLFNAGTPR 212
                      6789**************.99******************.........9*****************************97 PP

>> ATP-cone  ATP cone domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.5   0.0   5.1e-19     3e-15       1      86 []       1      89 [.       1      89 [. 0.97

  Alignments for each domain:
  == domain 1  score: 56.5 bits;  conditional E-value: 5.1e-19
                -EEE-TTS-EEE--HHHHHHHHHHHHHH.-HHHHHHHHHHHHHHHHHHHIIT-BHHHHHHHHHHHHH....HSS-HHHHHHHHHHHHHHHH CS
    ATP-cone  1 ikViKRdGtvepfdvekIkraiekAceg.seeeideiaeeveaevrkrlrdgisteeIqdlvektli....ehpdyavaaayilyrnlrke 86
                ++V KRdG+ e +  +kI++++++ c g + + +d++   + ++v ++ + g++t e+++l ++t++    +hpdya++aa+i ++nl+k+
  EPX73746.1  1 MFVYKRDGHQEKVAFDKITARVSRLCYGlDSDHVDPV--AITQKVISGVYPGVTTVELDNLAAETAAtmttKHPDYAILAARIAVSNLHKQ 89
                89**************************99999****..9999**********************************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (810 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       679  (0.0378716); expected 358.6 (0.02)
Passed bias filter:                      539  (0.030063); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.70u 0.30s 00:00:01.00 Elapsed: 00:00:00.46
# Mc/sec: 5332.11
//
Query:       EPX73747.1  [L=202]
Description: rho family GTPase Rho1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-56  189.2   0.0    4.5e-56  188.9   0.0    1.0  1  Ras       Ras family
    2.6e-21   76.1   0.0      4e-21   75.5   0.0    1.3  1  Roc       Ras of Complex, Roc, domain of DAPkinase
    1.1e-06   28.3   0.0    1.5e-06   27.8   0.0    1.3  1  Arf       ADP-ribosylation factor family
     0.0039   16.7   0.0     0.0054   16.2   0.0    1.3  1  SRPRB     Signal recognition particle receptor beta subunit


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.9   0.0     1e-59   4.5e-56       1     160 [.       8     179 ..       8     181 .. 0.98

  Alignments for each domain:
  == domain 1  score: 188.9 bits;  conditional E-value: 1e-59
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHH.HHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvk.kwveeik 98 
                 Klv+vGd+a+GKt+ll+ f k++F+e y +T+ +++y++++evdg++v+l +wDTAGqe++++lr+l+y d+++il++++++s +s++nv+ kw++e+ 
  EPX73747.1   8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTV-FENYVADVEVDGRHVELALWDTAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQeKWISEVL 105
                 9*******************************.**********************************************************9******* PP

                 HHSTTTSEEEEEEETTTGGG............G-SS-HHHHHHHHHHHT.SEEEEEBTTTTCTHHHHHHHHHHHH CS
         Ras  99 rvaeenvpivLvGnKvDlee............kravsteegeelakelg.lkfletSAktnenveeafeellrei 160
                 + ++ ++pi+Lv+ K+Dl++            ++ vs eeg+++a+++g +k+le+SAktne+v+e+fe+++r++
  EPX73747.1 106 HFCS-SLPILLVACKADLRHdpkiveelsktqQHPVSSEEGQAVAQKIGaYKYLECSAKTNEGVREVFESATRAA 179
                 ****.6*************************99****************99*******************99976 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.5   0.0   8.9e-25     4e-21       1     119 [.       8     121 ..       8     122 .. 0.87

  Alignments for each domain:
  == domain 1  score: 75.5 bits;  conditional E-value: 8.9e-25
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE...GHHHHCH. CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd...srssenl. 95 
                 K+v+vGd++ GKt+ll  f +++f e + +t+  +++   v +++        ++v+l++WDtaGqe+++ l+pl + +++++++++     +s +n+ 
  EPX73747.1   8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVAD-V-EVD-------GRHVELALWDTAGQEDYDRLRPLSYPDSHVILICFAvdsPDSLDNVq 97 
                 99*****************************98888654.3.344.......3689*****************************98743333446663 PP

                 HHHHHHHHHHCSSS-EEEEEE-TT CS
         Roc  96 keWlkelkkvagkspvilvgnkiD 119
                 ++W++e+ + +++ p++lv+ k+D
  EPX73747.1  98 EKWISEVLHFCSSLPILLVACKAD 121
                 68********************99 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.0   3.4e-10   1.5e-06      15     169 ..       7     173 ..       1     178 [. 0.71

  Alignments for each domain:
  == domain 1  score: 27.8 bits;  conditional E-value: 3.4e-10
                 EEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSSEE.EEEEEE..TTEEEEEEEE-SSGGGGGGGGGGCTTESEEE..EEEETT-CTTHHHHHHH.HHH CS
         Arf  15 lrilllGLDnaGKtTilkklkleelvt.tvPTigfn.veelei..knlkftvwDvGGqeklRplWknYfektdavi..fvvDsadreRleeakee.Lka 106
                  +++++G  + GKt +l  ++++ + +  vPT+  n v ++e+  +++++ +wD  Gqe   +l    +++ ++++  f vDs d+  l++ +e+ +++
  EPX73747.1   7 RKLVIVGDGACGKTCLLIVFSKGTFPEvYVPTVFENyVADVEVdgRHVELALWDTAGQEDYDRLRPLSYPDSHVILicFAVDSPDS--LDNVQEKwISE 103
                 589****999**************988589**988745666664489***********9887777766666655441277888775..66665542666 PP

                 HCTSGCCTTSEEEEEEE-TTSTTSS-HHHHHHHTTGGGSS.........SSSSEEEEEEBTTTTBTHHHHHH CS
         Arf 107 lleeeelkevallvlaNKqDlpealseeelrellgleelk.........gkrkleiqkcsavkgeglkegle 169
                 +l+    ++ ++l++a K Dl+++ +  e  ++ + + ++         +    +  +csa ++eg+ e +e
  EPX73747.1 104 VLH--FCSSLPILLVACKADLRHDPKIVEELSKTQQHPVSseegqavaqKIGAYKYLECSAKTNEGVREVFE 173
                 665..467899**********988765554444444554433333322233455667888888888888776 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   1.2e-06    0.0054       3     119 ..       6     118 ..       4     138 .. 0.74

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.2e-06
                 --EEEEE-STTSSHHHHHHHHHHSS---B---S..S-EEETTG...GGTT-SEEEETT-GCC.SHHHHHHHHHHGGEEEEEEEEETTS-HHHHHHHHHH CS
       SRPRB   3 kpavllvGlsdsGKTslftrLttdsvkktvtSq..essaalkvksekgskltliDfPGhekl.rqklleklkaksslkglvfvvDStidpkevkevAEl 98 
                 ++++++vG   +GKT l+   +++++ + ++    e+ +a+   + ++ +l+l D  G+e   r + l +    s++  + f vDS     +v+e   +
  EPX73747.1   6 RRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTvfENYVADVEVDGRHVELALWDTAGQEDYdRLRPLSY--PDSHVILICFAVDSPDSLDNVQE--KW 100
                 67899*******************99999887665777776667889999999*****998723333333..566789999****9655555554..24 PP

                 HHHHHHHHHHHTT---EEEEE CS
       SRPRB  99 lyeilliteklkdavdiliAC 119
                 + e+l         + +l+AC
  EPX73747.1 101 ISEVLHFCS---SLPILLVAC 118
                 555555444...334455555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       605  (0.0337442); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1488.04
//
Query:       EPX73748.1  [L=77]
Description: hypothetical protein SOCG_02966 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-12   46.7   6.4    1.6e-11   44.3   4.9    2.1  2  DUF4536   Domain of unknown function (DUF4536)
  ------ inclusion threshold ------
       0.24   10.9   0.0       0.26   10.8   0.0    1.1  1  DUF1071   Protein of unknown function (DUF1071)


Domain annotation for each model (and alignments):
>> DUF4536  Domain of unknown function (DUF4536)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.3   4.9   1.7e-15   1.6e-11       1      45 [.      21      69 ..      21      71 .. 0.91
   2 !    4.9   0.6    0.0034        31      10      19 ..      64      73 ..      64      77 .] 0.86

  Alignments for each domain:
  == domain 1  score: 44.3 bits;  conditional E-value: 1.7e-15
     DUF4536  1 dClsCRlvSGsGLigaGvYvyvqarr....rlklggkfgmltiaqvafa 45
                dCl+CRlv++++++g+GvY+y+q+      + +++++ g+l++a+ +++
  EPX73748.1 21 DCLPCRLVGATAFTGLGVYAYWQSNIprgtPFYRTRRLGILSLATGFVG 69
                9***********************987788999**********977665 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.0034
     DUF4536 10 GsGLigaGvY 19
                ++G++gaG+Y
  EPX73748.1 64 ATGFVGAGLY 73
                58******** PP

>> DUF1071  Protein of unknown function (DUF1071)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0     3e-05      0.26     104     133 ..      27      55 ..       9      65 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 3e-05
     DUF1071 104 lvkalalfGLGlyiyaGedlPeedkPkkql 133
                 lv a a+ GLG y y   ++P    P   +
  EPX73748.1  27 LVGATAFTGLGVYAYWQSNIPR-GTPFYRT 55 
                 8999*****************7.5555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       272  (0.015171); expected 358.6 (0.02)
Passed bias filter:                      246  (0.0137208); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.43
# Mc/sec: 535.79
//
Query:       EPX73749.1  [L=707]
Description: Trp-like ion channel Pkd2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   7.3e-100  334.7  35.0   7.3e-100  334.7  35.0    1.5  2  TRP       Transient receptor potential (TRP) ion channel
    7.5e-37  126.8   0.7    1.2e-36  126.2   0.7    1.3  1  TRP_N     ML-like domain


Domain annotation for each model (and alignments):
>> TRP  Transient receptor potential (TRP) ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.2      0.16   1.5e+03     148     182 ..       8      43 ..       5      92 .. 0.55
   2 !  334.7  35.0  8.1e-104  7.3e-100       2     421 ..     172     604 ..     171     610 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.16
         TRP 148 fmtgllffliliallvv.lvllfKlllellarkkli 182
                 f   +lff+i+   ++    l +K l  ++  ++++
  EPX73749.1   8 FFSFFLFFCIVQSTVAKsRQLYVKSLTTCMPNSQFS 43 
                 444455555555555544556666666666666544 PP

  == domain 2  score: 334.7 bits;  conditional E-value: 8.1e-104
         TRP   2 kwvtaviaglallasnasavastlgnsnaaahvaasvlslflyfQsvafigmlsvnyPpvlaawtqnfaWsmglirvsfmqkiinwyvqstgGtatlvl 100
                  wv++++ g+ ll+   s ++s + ++ a  +v  ++++lf + Q +a+ +m++  +P ++ +w  nf Wsmg+i+++fmqk+++wyv+stgG++++++
  EPX73749.1 172 YWVMCMVIGIPLLL---SLLLSPVLQTPAMWEVFENMVVLFQFAQMQALYAMMASPLPAIIFSWGRNFIWSMGIIKIGFMQKVFTWYVKSTGGDPSVLV 267
                 6*************...********************************************************************************** PP

         TRP 101 sssstssvsv.kral...........krges.k..slpesssklv.rGikrvaekagiestnafmtgllffliliallvvlvllfKlllellarkklik 183
                 + + +++v+  kr l           +  +  +  s+++++ ++  rGikr+ + +gie+tn+f+tg+ ff+il++++v++ +l +++le+   ++  k
  EPX73749.1 268 EMGPHANVGLaKRGLetasyfskrasNS-TLgTgsSSSSNNGTVAlRGIKRISYLMGIETTNFFITGFSFFIILLGFTVCIAILSRIVLEVYYLVARDK 365
                 **99999999635555555666433232.112221333333333457********************************************99999888 PP

         TRP 184 edrlkefrknwlgilkgallrlilifffqllvlclfeftqrdsaavvvlAvillalflgvllffafrvlitarkskrl.hknpaylLysdkkvlnkyGf 281
                 + + +++r+ w+ i+kg ++r i+++f q++vlc++e+++rds+a   l++ +++ + ++ll++++r+++++rk  +    ++   Lysd+++l+++Gf
  EPX73749.1 366 TLKRQRIREYWKAITKGFFYRAIYLGFWQMSVLCMWEIYTRDSSALAFLSMYVIVDMAVLLLYAFVRTMQIIRKTGAFsDPDALFNLYSDTQHLMRWGF 464
                 8777799*******************************************************************777655555569************* PP

         TRP 282 lyeqyrasrywffvpllvylfvkalfialaqgsGkvQvialliiEllylvlliwlrPyedkrtnvlniiisvvkvlnvilllaFseefglseivktvvG 380
                 +y++yr + +++  +llv+++++++fi+++q+s++vQ +a+++i+++ ++++i+ rPy +k+ n l+i i++v++++ i++l++++ f ++e+ + v+G
  EPX73749.1 465 MYVSYRHRFFFLSFFLLVVILIRSMFIGFGQSSPIVQGCAMFAISVVEFFFMIFARPYATKHLNSLHIGIALVNLISGIFILIMCKAFTINELARQVIG 563
                 *************************************************************************************************** PP

         TRP 381 vvlivinavlalvlliliivnaiiallsknpdrryrpakdd 421
                 +v+++ina+ +l+l++ i++  +i+ll+++++ +y +  dd
  EPX73749.1 564 IVFFAINAIAMLLLILGIFIRNVIVLLRRSKNGTYYRILDD 604
                 *****************************999988874444 PP

>> TRP_N  ML-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.2   0.7   1.3e-40   1.2e-36       1     139 []      28     166 ..      28     166 .. 0.93

  Alignments for each domain:
  == domain 1  score: 126.2 bits;  conditional E-value: 1.3e-40
       TRP_N   1 lvtssfenClensqftaskfdvtftpdnktvvfnvtgtssienkavtlelkveaygyevvnetvdpCdanvkglCPlgpgfkinasgvlkv...seevv 96 
                 l+ +s+++C+ nsqf+as++d++++pdn +++f+v++ s ++++ v ++++v+ayg++  ++t+dpC++n++g+CP+++g +i ++g+++      + +
  EPX73749.1  28 LYVKSLTTCMPNSQFSASTLDAVYYPDNTSIYFDVSARSLVSTN-VSIHVNVSAYGFTL-EKTIDPCNMNIAGFCPMQAG-NIILEGNHNLtgeVIQWI 123
                 67899**************************************9.************96.9*******************.888888888743334568 PP

       TRP_N  97 seipsiaYsipdldatvrvriystgeateiaCvsatitngktv 139
                 +++p+iaY +pdlda+v+v+iy+t+++++iaCv  ++ ng +v
  EPX73749.1 124 DDLPGIAYLVPDLDAKVTVNIYDTDNNQRIACVMTNVENGRSV 166
                 899*******************999***************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (707 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       891  (0.049696); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.30s 00:00:00.96 Elapsed: 00:00:00.46
# Mc/sec: 4624.89
//
Query:       EPX73750.1  [L=585]
Description: ATP-dependent RNA helicase Has1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-47  160.8   0.0      5e-47  159.9   0.0    1.5  1  DEAD        DEAD/DEAH box helicase
    3.8e-24   85.2   0.0    5.1e-23   81.5   0.0    2.7  3  Helicase_C  Helicase conserved C-terminal domain
    1.1e-19   70.4   0.7      2e-19   69.5   0.7    1.5  1  DUF4217     Domain of unknown function (DUF4217)
  ------ inclusion threshold ------
      0.018   15.1   1.8      0.029   14.4   1.8    1.3  1  DUF4778     Domain of unknown function (DUF4778)
       0.21   11.4   0.0       0.42   10.4   0.0    1.4  1  VIT1        VIT family
       0.61    9.5   2.6       0.53    9.7   0.9    1.7  2  BIRC6       Baculoviral IAP repeat-containing protein 6
          3    7.0   8.3          5    6.2   8.3    1.3  1  Sin_N       Sin-like protein conserved region


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.9   0.0   1.9e-50     5e-47       1     176 []     122     294 ..     122     294 .. 0.95

  Alignments for each domain:
  == domain 1  score: 159.9 bits;  conditional E-value: 1.9e-50
                 -HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHS..TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   1 tdiQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyet..kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldng 97 
                 t++Qa++ip +l g+dvl+aa+TGsGKTlaflip+++ +y    k ++g+ ++iv+PtreLa q++  +k+++ky + ++  +igg ++r + +kl +g
  EPX73750.1 122 TEVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLYALkfKPRNGTGVIIVSPTRELALQIFGVAKEVLKYHHQTYGIVIGGANRRAEAEKLVKG 220
                 789*************************************99999999***************************88778899**************** PP

                 CSEEEEEHHHHHHHH.HCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTST.TTSEEEEEESSBSHHHHHH CS
                 xxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxx RF
        DEAD  98 vdivvgtpgrlddll.stgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgk.lqrqvivlSATlpkdvkkl 176
                 v+++v+tpgrl+d+l +t+ + ++++r lV+DEadr+l+ gf+d++++i++ l       + ++rq+ ++SAT +++v++l
  EPX73750.1 221 VNLLVATPGRLLDHLqNTKGFVYRNLRSLVIDEADRILEIGFEDEMRQIVKVL-------PsEDRQTSLFSATQTTKVEDL 294
                 *************9977888*********************************.......447788*********999875 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.74   1.9e+03       4      41 ..     158     199 ..     156     228 .. 0.50
   2 !   81.5   0.0     2e-26   5.1e-23       6     111 .]     336     440 ..     331     440 .. 0.89
   3 ?   -2.0   0.0       1.8   4.5e+03      80     107 ..     524     551 ..     524     554 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.74
                 HHHHHH.HHHTTTTSEEEEEESSHH.HHHH...HHHHHHHTTS CS
  Helicase_C   4 eallel.lkleeeggkilifvntid.rlek...vklllekkgi 41 
                 e+l++l + + ++g  ++i+++t++  l+    +k +l+ ++ 
  EPX73750.1 158 EMLYALkF-KPRNGTGVIIVSPTRElALQIfgvAKEVLKYHHQ 199
                 56666633.4566777888888888544223332222222233 PP

  == domain 2  score: 81.5 bits;  conditional E-value: 2e-26
                 HHHHHHHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHHHHHHH CS
  Helicase_C   6 llellkleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvtsyiqri 104
                 l  +l +++ ++k+++f+ ++ +++ +  ll+  ++ v+ lhg+ +q+ r  ++ +f + e+ +L++tdva+rG+dip v+ ++++d+p+++++yi+r+
  EPX73750.1 336 LFSFL-KRNLKKKVIVFMSSCASVKYLAELLNYIDLPVLDLHGKQKQQRRTNTFFEFCNAERGILLCTDVAARGLDIPAVDWIVQYDPPDDPRDYIHRV 433
                 55566.78899*************65333345559**********************999999************************************ PP

                 TTSSSTT CS
  Helicase_C 105 GRtgRag 111
                 GRt+R++
  EPX73750.1 434 GRTARGN 440
                 *****85 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 1.8
                 STSTTESEEEESSSSSSHHHHHHHHTTS CS
  Helicase_C  80 idipkvnlVinfdlprnvtsyiqriGRt 107
                 +d+ kv   + fd p nv   i ++GRt
  EPX73750.1 524 LDLAKVAKSFGFDHPPNVNITIGASGRT 551
                 5777888888899**************9 PP

>> DUF4217  Domain of unknown function (DUF4217)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.5   0.7   7.9e-23     2e-19       1      61 []     481     541 ..     481     541 .. 0.98

  Alignments for each domain:
  == domain 1  score: 69.5 bits;  conditional E-value: 7.9e-23
     DUF4217   1 iqqkleslcakdrdlkelAqkAfvsyvraYsvhlakeiFrvkkLdlealAksfGLleaPki 61 
                 +q++le+l++k+++l+++A++++++y++aY+++++k+iF+++kLdl+++AksfG+  +P++
  EPX73750.1 481 VQSQLEKLVSKNYYLQQSAKDGYRAYLQAYASYSLKSIFDINKLDLAKVAKSFGFDHPPNV 541
                 699********************************************************86 PP

>> DUF4778  Domain of unknown function (DUF4778)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   1.8   1.1e-05     0.029     120     198 ..       7      84 ..       1     160 [. 0.67

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 1.1e-05
     DUF4778 120 kreraskkrekgqrkierrlklakragigsesaarqngkRrrkelkekedeekselneiaelldgqdaaervkkeleak 198
                 kr ++ + + k++++ e++  ++++ gi  esa   ++k++ k +  +e+ee+++   ++   ++++ +++ + + e++
  EPX73750.1   7 KR-KKAQSEVKPEEELEKEIAVVQQDGIVGESAPEKKKKKKDKSVSDQEKEEREDASVEENTKEIENEENENEANEEIH 84 
                 33.34455799**********************9999999999999999999998844443333333333322222222 PP

>> VIT1  VIT family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00016      0.42      54     189 ..      50     207 ..      48     227 .. 0.60

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00016
        VIT1  54 lsvkserdlekaerkreeeeleedpe.egeaeelaeilearglseelaqevaaellknpdallelmlreel......g....psaseelasplkaAlss 141
                 +s + +++ e+a+++++++e+e++++ ++  ee++   +  g  + +++++ +  l+++ +   + +++e+           + a ++   + k +   
  EPX73750.1  50 VSDQEKEEREDASVEENTKEIENEENeNEANEEIHGTAKLNGGIQGEVENFSELPLSENTQKAITDMAFEKmtevqaRtippLLAGRDVLGAAKTGSGK 148
                 455666777888888888999999885555677888888886555555555554444333322233443332222221222122233344455666666 PP

        VIT1 142 alsfliGgliPllpylfvesvglalvvsiavtllalllfGavkallt...........g 189
                  l+fli ++  l +  f + +g++++++     lal +fG+ k +l            g
  EPX73750.1 149 TLAFLIPAIEMLYALKFKPRNGTGVIIVSPTRELALQIFGVAKEVLKyhhqtygivigG 207
                 6666666666666666666899999999999*************998666555555541 PP

>> BIRC6  Baculoviral IAP repeat-containing protein 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.9   0.00021      0.53     103     165 ..      31     107 ..      25     117 .. 0.72
   2 ?   -2.6   0.0       1.2   3.1e+03      75     118 ..     342     382 ..     340     387 .. 0.62

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00021
       BIRC6 103 mgilvslssaksnsqelrasitDDskdqeelrsltDDskeaesek.dsqsssv..............vqdishvalse 165
                  gi v  s+ +++++++  s++D +k+++e  s+ +++ke e+e+ ++++++               v+++s++ lse
  EPX73750.1  31 DGI-VGESAPEKKKKKKDKSVSDQEKEEREDASVEENTKEIENEEnENEANEEihgtaklnggiqgeVENFSELPLSE 107
                 566.556666677888999********************998776444333323666667777666666677666666 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.2
       BIRC6  75 saLkkavDsllCsvChikPeyFslllswmgilvslss.aksnsqe 118
                  +Lkk v   + s   +  +y   ll+++++ v   +   +++q+
  EPX73750.1 342 RNLKKKVIVFMSSCASV--KYLAELLNYIDLPV--LDlHGKQKQQ 382
                 57888887777665555..69999999999976..3312223333 PP

>> Sin_N  Sin-like protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   8.3     0.002         5     150     230 ..      10      90 ..       2     138 .. 0.69

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.002
       Sin_N 150 qqeskaeneeqdeeeeeakavtvkfkraeterqkkareqSyallkkkeeeEpWiklevheqesseseaerqklfkqttase 230
                 +++s+ ++ee+ e+e +  ++   +   ++e++kk++ +S++ ++k e e++ ++ +++e+e++e e e  + +  t++ +
  EPX73750.1  10 KAQSEVKPEEELEKEIAVVQQDGIVGESAPEKKKKKKDKSVSDQEKEEREDASVEENTKEIENEENENEANEEIHGTAKLN 90 
                 2233333344455555556666666669********************************999999988777666654444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (585 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1821  (0.101567); expected 358.6 (0.02)
Passed bias filter:                      834  (0.0465168); expected 358.6 (0.02)
Passed Vit filter:                       118  (0.00658152); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.79u 0.33s 00:00:01.12 Elapsed: 00:00:00.47
# Mc/sec: 3772.32
//
Query:       EPX73751.1  [L=1367]
Description: transcription elongation factor Spt6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.9e-82  274.3   0.0    1.8e-81  272.7   0.0    1.9  1  SH2_2        SH2 domain
    6.2e-48  162.4   0.1    4.7e-47  159.5   0.0    2.4  2  YqgF         Holliday-junction resolvase-like of SPT6
    3.1e-47  159.2   0.0    8.3e-47  157.8   0.0    1.8  1  HHH_7        Helix-hairpin-helix motif
    1.7e-34  118.7   1.7    1.7e-34  118.7   1.7    2.3  2  HTH_44       Helix-turn-helix DNA-binding domain of SPT6
    8.7e-20   71.1  19.0    8.7e-20   71.1  19.0    5.4  2  SPT6_acidic  Acidic N-terminal SPT6
    4.1e-05   23.3   0.1     0.0036   17.0   0.0    3.3  3  Tex_N        Tex-like protein N-terminal domain
    0.00011   22.2   0.0    0.00042   20.4   0.0    2.1  1  SH2          SH2 domain
    0.00016   22.2   0.0    0.00043   20.7   0.0    1.8  1  Tex_YqgF     Tex protein YqgF-like domain
     0.0013   19.6   0.6     0.0013   19.6   0.6    2.9  2  HHH_9        HHH domain
     0.0041   17.4   0.0      0.011   16.0   0.0    1.8  1  S1           S1 RNA binding domain
  ------ inclusion threshold ------
       0.01   16.1   0.0      0.026   14.8   0.0    1.8  1  HHH_3        Helix-hairpin-helix motif


Domain annotation for each model (and alignments):
>> SH2_2  SH2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  272.7   0.0   1.1e-84   1.8e-81       1     215 [.    1141    1356 ..    1141    1357 .. 0.95

  Alignments for each domain:
  == domain 1  score: 272.7 bits;  conditional E-value: 1.1e-84
       SH2_2    1 yydeeaeeedlkkeeekkkkeekkrkkyvkRvikHpnFknvsaeeaeellaskerGdvviRPSskgedhLtvtwkvadgvyqhidvlEedkenefsl 97  
                  y+d eae++d++k+    + e+++++  v RvikHp+Fk+++a++ae++l++ ++Gd+viRPSskg+dh+ vtwkv +  +qhidvlE dkenefs+
  EPX73751.1 1141 YWDAEAEDRDNEKM----QAETQAEQ-RVARVIKHPLFKDLNASQAEAYLSKLQVGDLVIRPSSKGSDHIVVTWKVGESSFQHIDVLELDKENEFSI 1232
                  79*****9995444....33333333.477******************************************************************* PP

       SH2_2   98 gktLiigk......eeyeDLDeliarhvepmakkveellahekfkkgskeeveelLreekkanpkrsvYafslskkkpgkflLsflankkarvehey 188 
                  g++Li+++      ++y+DLDeli+ h++++akk++e++ hek+++gs++e+e++L+++++anpkrs+Y+f+ ++++pg+f+L+f+a  +++v  ++
  EPX73751.1 1233 GQRLIVKGrfenmtYQYSDLDELIVMHIKAIAKKIDEMCMHEKYRRGSRAEIEHWLESYSEANPKRSCYTFCSDQDHPGYFVLCFKAGVSSPVLAWP 1329
                  ************************************************************************************************* PP

       SH2_2  189 vkvipegfklrkqefddvkaLlnwFKk 215 
                  vkvip+++ l+++ ++d++aL+n+FK 
  EPX73751.1 1330 VKVIPNAYFLQGNVYADMTALCNGFKL 1356
                  **************************6 PP

>> YqgF  Holliday-junction resolvase-like of SPT6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.79   1.3e+03      40      71 ..     181     212 ..     169     216 .. 0.68
   2 !  159.5   0.0   2.9e-50   4.7e-47       1     149 [.     686     823 ..     686     824 .. 0.98

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.79
                 S-TT-SS-SHHHHHHHHHHHHHH--SEEEE-- CS
        YqgF  40 areedrekkakfvetlkkfllskkPdvigvsG 71 
                 ++e++ e++++        ++s++P+++g+s 
  EPX73751.1 181 QDEFEDEEPQEEKYDATPQIESVRPEALGISE 212
                 35555555555555567789*********985 PP

  == domain 2  score: 159.5 bits;  conditional E-value: 2.9e-50
                 S-----EEEEE-TT--TTS-EEEEEE-TTS-EEEEEEE-S-TT-SS-SHHHHHHHHHHHHHH--SEEEE--SSTHHHHHHHHHHHHHHHTTB-TTS-B- CS
        YqgF   1 qgkiikvLgvafgkgrsddaiicvlvngeGevvdslklaareedrekkakfvetlkkfllskkPdvigvsGenrdaqkliedvkevlhekeqdsrlstv 99 
                 +g+i++vL+v++gkg+ +daiic +vn+ Ge+vds+kl  + +d +++ +f++    f+ +++PdvigvsG+++ a+k++++v+  l++++      +v
  EPX73751.1 686 RGTIPSVLAVSNGKGEPSDAIICLFVNDMGEPVDSIKL-PDFRDPANQVMFTD----FVDKVNPDVIGVSGMSVAAHKVRQNVQSALSSHD------PV 773
                 699***********************************.999***********....**********************************......** PP

                 -EEE---TTHHHHHTSHHHHHHSTT--HHHHHHHHHHHHHH-HHHHHHCS CS
        YqgF 100 gvilvddevailYqnskkaeaefrdkPpllkyavalaRkiqdPLleyaql 149
                 ++++v+de+a+lYqns +a++ef+   +   y++alaR++q+PL+eya+l
  EPX73751.1 774 DIVMVNDEIARLYQNSSRATDEFPSFSTTTLYCIALARYVQNPLFEYAAL 823
                 ************************************************98 PP

>> HHH_7  Helix-hairpin-helix motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.8   0.0   5.1e-50   8.3e-47       2     104 .]     826     928 ..     825     928 .. 0.99

  Alignments for each domain:
  == domain 1  score: 157.8 bits;  conditional E-value: 5.1e-50
                 HHHTS---TTGGGS-HHHHHHHHHHHHHHHHHHH-EEHHHHCT-HHHHGGGGGSTT--HHHHHHHHHHHHHC-S----TTHHHHTTSS-HHHHHHHCCC CS
       HHH_7   2 dvlslsfhPlqellskeellkaletalvdivnlvgvdvnkavankyeaallkyiaGlGprkatdllkklkrlnerlearsqlitkqilskkvflncagf 100
                 d+lslsf+P+q+ll++e+l+++letalvd+++lvg+d+n+av+nkyea++l+yiaGlGprka+++lkk++  ++r+++rs+li+kqi+++k+f+nc++f
  EPX73751.1 826 DLLSLSFDPWQHLLPSETLWRYLETALVDVSSLVGIDINEAVNNKYEANILPYIAGLGPRKADYILKKIATVGGRIDNRSDLISKQIVTRKIFINCSSF 924
                 99************************************************************************************************* PP

                 EE-- CS
       HHH_7 101 lkid 104
                 ++i+
  EPX73751.1 925 FIIP 928
                 **96 PP

>> HTH_44  Helix-turn-helix DNA-binding domain of SPT6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.1         7   1.1e+04      67      83 ..      92     108 ..      52     114 .. 0.64
   2 !  118.7   1.7     1e-37   1.7e-34       2     115 .]     285     398 ..     284     398 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 7
                 SSTTS-....B--HHHH CS
      HTH_44  67 aekeekkaeklLneddL 83 
                 + +eek+ +++L+eddL
  EPX73751.1  92 RAEEEKAPQDMLDEDDL 108
                 22233366778888887 PP

  == domain 2  score: 118.7 bits;  conditional E-value: 1e-37
                 T---HHHHHHHHHHHHHHHHHHH---SS---HHHHHHHHHHHHHHHTS---HHHHHHH-GGGSB-SSTTS-....B--HHHHHHHHHHHHHHHHHHHHH CS
      HTH_44   2 keltdeeleeeaeWiakkllkekqesleeleeefkeavkkvleFlvkdelEvPfifqhRkdyllhaekeekkaeklLneddLwriveldikfrsllekr 100
                 +++td+e+ +e+ Wia+++l+++++ +++l ++f++av+++++F+v+++lEvPfi+qhR+dy++h ++++++ ++lLn+ddLw i++l+++++sl++k+
  EPX73751.1 285 EDCTDQEILDESLWIANRILEKRHDIKTDLLDHFRSAVRHTVHFFVRESLEVPFIWQHRRDYIVHYDRQRDSITPLLNQDDLWCIFNLCTRYWSLHSKK 383
                 689************************************************************************************************ PP

                 HHHHHHHHCC----H CS
      HTH_44 101 naleklyeklkvdDk 115
                 ++l kly++l ++D+
  EPX73751.1 384 KDLMKLYSDLGISDE 398
                 ***********9995 PP

>> SPT6_acidic  Acidic N-terminal SPT6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.1  19.0   5.3e-23   8.7e-20       1      88 [.      51     131 ..      51     132 .. 0.78
   2 ?   -3.3   0.4       8.9   1.4e+04       6      15 ..    1147    1156 ..    1133    1167 .. 0.55

  Alignments for each domain:
  == domain 1  score: 71.1 bits;  conditional E-value: 5.3e-23
  SPT6_acidic   1 DssEEedddeeeerkvregFIvdddeeeeeeeeseeeeekkrrkkkkkrreeee..daLdedDldLieentgvkvkrkkkkfkRlkraed 88 
                  DssEE+++dee+er++regFIv+d+++e  +e       kk+++kk+ ++e ++  d+LdedDl+L++entg+++++   k+kRlkr++d
   EPX73751.1  51 DSSEESETDEEAERAIREGFIVEDEDDEAPQEA-----LKKKKRKKRAEEE-KApqDMLDEDDLELVMENTGQDNRT---KLKRLKRGRD 131
                  9**********************9777555433.....3344444444332.22469***************99986...9******997 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 8.9
  SPT6_acidic    6 edddeeeerk 15  
                   ed d+e++++
   EPX73751.1 1147 EDRDNEKMQA 1156
                   2222222222 PP

>> Tex_N  Tex-like protein N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0     0.077   1.3e+02      30      94 ..     352     416 ..     315     427 .. 0.77
   2 !   17.0   0.0   2.2e-06    0.0036     128     179 ..     492     543 ..     479     546 .. 0.90
   3 ?   -3.4   0.1         4   6.6e+03      63      87 ..    1104    1129 ..    1098    1184 .. 0.67

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.077
       Tex_N  30 RYRkeatggldeeqlreieerleylrelekrkeevlksieeqgklteeLkkkieaaktleeledl 94 
                 R R   t  l+++ l  i + ++++ +l+++k++ +k  ++ g  +e + +  ++a+tle+++dl
  EPX73751.1 352 RQRDSITPLLNQDDLWCIFNLCTRYWSLHSKKKDLMKLYSDLGISDEMVVTLCQEASTLETVDDL 416
                 33444555689999999999999999999999999999999999999999999999999999998 PP

  == domain 2  score: 17.0 bits;  conditional E-value: 2.2e-06
       Tex_N 128 aeeeaakyvnkevksaeealegardIiaeeisedaelrkklrellkkegviv 179
                 ++e a++yv++++++ e  l+ ar++ aeei +d+ +rk+ r+ l ++g+++
  EPX73751.1 492 PQELATSYVSNDLTDHELVLQRARKVFAEEIVHDPYFRKAFRDKLFQTGIVS 543
                 57899*******************************************9987 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 4
       Tex_N   63 evlksieeqgklte.eLkkkieaakt 87  
                  +++ s++eq+   e +L+++i+++ +
  EPX73751.1 1104 AIIISLNEQNFTAElSLRNSIMQTVQ 1129
                  55556666655544455555555443 PP

>> SH2  SH2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0   2.6e-07   0.00042       3      58 ..    1173    1235 ..    1172    1259 .. 0.79

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 2.6e-07
                  ESSSHHHHHHHHHHTTSSTTEEEEEEESSSTTEEEEEEEETT.EEEEEEEEEETTS.......E CS
         SH2    3 hgkisrkeaerlLleekkdGtFLvReSeskpGdytlsvvedg.kvkhykiqsteng.......k 58  
                  +++++ ++ae +L +  + G+ ++R S++  ++++++++ ++ +++h+++ +++++       +
  EPX73751.1 1173 FKDLNASQAEAYLSK-LQVGDLVIRPSSKGSDHIVVTWKVGEsSFQHIDVLELDKEnefsigqR 1235
                  5788999*******9.************************999*********999965555541 PP

>> Tex_YqgF  Tex protein YqgF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   2.7e-07   0.00043      46     126 .]     734     814 ..     721     814 .. 0.90

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 2.7e-07
                 HHHHHHHHTT--EEEE.ESSTTHHHHHHHHHHHHHHGGG--EEEEE--TTHHHHHHSHHHHHH-TTS-HHHHHHHHHHHHHH CS
    Tex_YqgF  46 klkklvkkykveliai.GnGtasreteklvaelikeeelkvkyvivsEaGaSvYSaselaaeEfpdldvslrgavsiarrlq 126
                  ++++v+k + ++i + G  +a++++ + v+++++++   v++v+v++  a +Y  s+ a++Efp ++ ++   +++ar +q
  EPX73751.1 734 MFTDFVDKVNPDVIGVsGMSVAAHKVRQNVQSALSSH-DPVDIVMVNDEIARLYQNSSRATDEFPSFSTTTLYCIALARYVQ 814
                 578899999999999878999***********99986.77***************************************987 PP

>> HHH_9  HHH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.3       3.5   5.8e+03      31      55 ..      84     108 ..      67     131 .. 0.55
   2 !   19.6   0.6     8e-07    0.0013       2      62 ..     937    1000 ..     936    1025 .. 0.68

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 3.5
       HHH_9  31 igeeallkkldkkklaeeevgeptl 55 
                  +++++ k+ +++k+ ++ ++e  l
  EPX73751.1  84 LKKKKRKKRAEEEKAPQDMLDEDDL 108
                 2223333333333333333444444 PP

  == domain 2  score: 19.6 bits;  conditional E-value: 8e-07
       HHH_9    2 pLDnTavHPEsYalakkllkk.lgldlkeligeeallkkldkkklaee...evgeptleDIleeL 62  
                  +LD T +H E Y+la+k++++ l+ld ++ i+e ++ k +  + l+++   +v+e  le+  ++L
  EPX73751.1  937 ILDTTRIHNEDYELARKMASDaLELDEED-IEELEASKGVVYHLLEDNevaKVDELVLEEYADQL 1000
                  8*****************98745555544.45555555555555544311134555555555544 PP

>> S1  S1 RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   6.9e-06     0.011       7      75 .]    1055    1121 ..    1050    1121 .. 0.92

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 6.9e-06
                  EEEEEEEEEETTEEEEEETTTEEEEEEGGGSSSSCEESCHHHCEETTEEEEEEEEEEETTTTEEEEEEC CS
          S1    7 vveGeVtsvtkgGafVelgngvegfvpaselsrdarvedpdevlkvGdevkvkvlkvdkdrrriilsik 75  
                   v  +V++vt+  + V l+ +v+g + a e+s+d     p + l+ G++v++ ++ +++++  + ls++
  EPX73751.1 1055 LVPVNVKRVTNRFVAVKLDCDVDGDIKADEVSDD--FIPPPQLLQAGQTVEAIIISLNEQNFTAELSLR 1121
                  57789***************************99..67799********************99999975 PP

>> HHH_3  Helix-hairpin-helix motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   1.6e-05     0.026       4      64 ..     859     925 ..     856     926 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.6e-05
       HHH_3   4 vgvdiNtA.....saeeLqklpGlgpklAknIvayReknG.pfksreeLlkvkglgpktfeqlagfl 64 
                 vg+diN A      a  L +++Glgp++A+ I++     G ++ +r +L +++ ++ k f  +  f+
  EPX73751.1 859 VGIDINEAvnnkyEANILPYIAGLGPRKADYILKKIATVGgRIDNRSDLISKQIVTRKIFINCSSFF 925
                 77888877555557999*******************99955*******************9999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1367 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1187  (0.0662056); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.95u 0.31s 00:00:01.26 Elapsed: 00:00:00.48
# Mc/sec: 8503.15
//
Query:       EPX73752.1  [L=992]
Description: mediator-replication checkpoint 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.7e-33  114.2  17.8    6.7e-33  114.2  17.8    6.2  6  MRC1      MRC1-like domain


Domain annotation for each model (and alignments):
>> MRC1  MRC1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -7.3   9.8         1   1.8e+04      37     123 ..      58     155 ..      40     172 .. 0.42
   2 ?   -3.7   2.9      0.88   1.6e+04     102     116 ..     185     199 ..     151     222 .. 0.44
   3 ?    0.3   7.2     0.049   8.9e+02      83     129 ..     424     468 ..     392     490 .. 0.50
   4 ?   -0.8   9.4      0.11     2e+03      25      73 ..     522     570 ..     497     575 .. 0.75
   5 !  114.2  17.8   3.8e-37   6.7e-33       5     145 ..     679     816 ..     675     817 .. 0.83
   6 ?   -1.8   2.4      0.22   3.9e+03      29      71 ..     856     898 ..     833     960 .. 0.61

  Alignments for each domain:
  == domain 1  score: -7.3 bits;  conditional E-value: 1
        MRC1  37 daeleeliDdesedeevdkdelaaekakeereeDdkevekllkdittGglRkrrrr.ag..gndldls..Ds..Ddee....aelrrrkrrrrekkrk 123
                 + e ++ +  +s+++++d+d   ++    er + + + ek  +++t G+    +++ +   +n l++s  +s  + e      ++++r ++  ekk+k
  EPX73752.1  58 ETETSTNVAQNSSETQMDDDLQSKFSSAYERVKKRLQSEKKNNNVTYGKENLEKQNiESdnENALQVStpSSpvEQEPvqapLDRESRLKQLVEKKKK 155
                 33333333333334444444444555555555555555555555555554433333222122223444442221222244332233333333334444 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 0.88
        MRC1 102 DsDdee.aelrrrkrr 116
                 D+ + e +   r++r 
  EPX73752.1 185 DEAESEsK-SYRMERG 199
                 11111112.1222222 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 0.049
        MRC1  83 tGglRkrrrraggndldls..DsDdee...aelrrrkrrrrekkrkallede 129
                   +   +   a +++l +s  D+D+ee     +r+rk++++ ++r+    +e
  EPX73752.1 424 REETE-KEL-A-EQGLLVSdaDKDEEEqlgYIERARKQAEKIRQRE----HE 468
                 33333.221.1.3444444345566664332233333333333332....22 PP

  == domain 4  score: -0.8 bits;  conditional E-value: 0.11
        MRC1  25 gvsdeeeedeeddaeleeliDdesedeevdkdelaaekakeereeDdke 73 
                  ++d+e e+++++ ++ + +D ++ed++ + d+  +   ++++e+++ke
  EPX73752.1 522 VMDDDEMEEQNNSPTDMRVVDSDNEDDDLRIDDFSQTPKENKEEKESKE 570
                 23888888888999**********9***999999998888888887776 PP

  == domain 5  score: 114.2 bits;  conditional E-value: 3.8e-37
        MRC1   5 asefveeeAeeSeDeyaGlggvsdeeeedeeddaeleeliDdesedeevdkdelaaekakeereeDdkevekllkdittGglRkrrrraggndl.dlsD 102
                  ++fve++AeeSeDeyaG+ggvsde+e++ee + e++++iDde++ ++++ +++a++  ++e ++D+k ve+l+kd+ttGglR +r r ++++l d sD
  EPX73752.1 679 FTNFVEDQAEESEDEYAGMGGVSDEDEGNEELEPEIKNMIDDETDLKKEEIASMARYARDQEIDKDNKLVEQLMKDVTTGGLR-KRHR-NNAGLlDDSD 775
                 579****************************999**********99*************************************.6643.3344435444 PP

        MRC1 103 sDdeeaelrrrkrrrrekkrkalledekleklaknpkakAFvk 145
                 +Dd+e +   r+++ +e +r++l+e+e+l ++    k++AF++
  EPX73752.1 776 DDDDE-HNAIRREKLKELRRRKLMEHENL-EILGGGKRQAFLA 816
                 44444.34445555566677778888899.777799*****97 PP

  == domain 6  score: -1.8 bits;  conditional E-value: 0.22
        MRC1  29 eeeedeeddaeleeliDdesedeevdkdelaaekakeer.eeDd 71 
                  e +de++ +e + l++ ++ ++ vd +el + k k    e+Dd
  EPX73752.1 856 AEVDDEDATREKDGLLEKAN-RNYVDRSELSKVKSKTSLtEKDD 898
                 33445555566666666665.66666666666665554313333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (992 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2066  (0.115232); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.96u 0.27s 00:00:01.23 Elapsed: 00:00:00.42
# Mc/sec: 7101.36
//
Query:       EPX73753.1  [L=89]
Description: 40S ribosomal protein S25 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.6e-32  111.0   0.7    2.8e-32  110.9   0.7    1.0  1  Ribosomal_S25  S25 ribosomal protein


Domain annotation for each model (and alignments):
>> Ribosomal_S25  S25 ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.9   0.7   1.6e-36   2.8e-32      20     100 ..       3      83 ..       1      84 [. 0.98

  Alignments for each domain:
  == domain 1  score: 110.9 bits;  conditional E-value: 1.6e-36
  Ribosomal_S25  20 kkKKwskgkvkdklnnavlfdketydkllkevpkyklitpsvvserlkingslArraLreleekgliklvskhraqviYtr 100
                     kKKwskgkvkdk+++a +fdk+++d++ kevp +k+i++sv+++r+k+ng+lAr a+r+l+++g+i++v ++++q iYtr
     EPX73753.1   3 PKKKWSKGKVKDKAQHATVFDKNLIDRINKEVPAFKFISVSVLVDRMKMNGALARIAIRDLADRGVIQKVDHSSKQFIYTR 83 
                    59******************************************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       444  (0.0247643); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.24s 00:00:00.58 Elapsed: 00:00:00.38
# Mc/sec: 693.86
//
Query:       EPX73754.1  [L=321]
Description: eukaryotic protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     2e-125  418.7   0.0   2.2e-125  418.5   0.0    1.0  1  UPF0160   Uncharacterised protein family (UPF0160)
  ------ inclusion threshold ------
      0.083   13.0   1.3       0.14   12.2   0.2    1.9  2  Rsbr_N    Rsbr N terminal


Domain annotation for each model (and alignments):
>> UPF0160  Uncharacterised protein family (UPF0160)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  418.5   0.0  2.5e-129  2.2e-125       1     317 []       6     319 ..       6     319 .. 0.97

  Alignments for each domain:
  == domain 1  score: 418.5 bits;  conditional E-value: 2.5e-129
     UPF0160   1 kigTHngkFhaDevlAvalLrllpeykdaelvRtrdpevleecdivvDVggvyDpakkryDHHqrefnetfsekaktklSSaGLvYkhfgkeiikkllk 99 
                 +i+THng FhaDe+lAv++Lr+l++y+da++vR+rdp+ l++cdivvDVgg+yD  k  +DHHqref++t+s+k+kt+lSSaGLvYkhfgke+ik++l 
  EPX73754.1   6 TIATHNGAFHADEALAVYMLRNLDTYRDAKVVRSRDPQLLDSCDIVVDVGGKYDGVK-YFDHHQREFSDTLSSKYKTRLSSAGLVYKHFGKEVIKSVLV 103
                 59*****************************************************98.**************************************976 PP

     UPF0160 100 le.ldeeevellyeklyeefveaiDaiDnGisvyee.vekkykiktslssrvgrlnpewne.eekeedederFekAselvgeeflekvkylakswlpar 195
                  + +++e++e+lyek+y++f+e +Da+DnGis +++  ++++k   sl+++v+++ p+wn+ +++ee+  e+F+kAse++g+ f+++v+++a+swlpa+
  EPX73754.1 104 GKqISQEDLEILYEKIYTSFIEGLDANDNGISPFPAdLTPTFKAAMSLPEMVSTYIPSWNSeKQDEETFLECFNKASEFIGSWFVRTVNNYASSWLPAK 202
                 5569****************************998889**********************9667777889***************************** PP

     UPF0160 196 eivkealekrkevdesgrilvleesvpwkehllelekelkiekkvlyvlyedeeekwrvqavpvskesfesrkpLpeeWrGlrdeeLsevsgiegavFv 294
                 ++ +ea+ ++    ++  il++++++pwk+hl+++ekel+ie++++y++y+d ++ wrvqav ++++sf+sr++Lpe WrG+rde+Lse++gi+++vFv
  EPX73754.1 203 TLAREAVLRA----KDSPILIMDKFFPWKSHLYDIEKELNIEGQFKYAIYSD-GKGWRVQAVAIDPTSFTSRLALPEPWRGVRDEKLSELTGIPNCVFV 296
                 *********7....999*********************************95.9********************************************* PP

     UPF0160 295 HasgFiggnktkegalemAkkaL 317
                 HasgFiggn t+egalemAk+aL
  EPX73754.1 297 HASGFIGGNGTYEGALEMAKRAL 319
                 ********************997 PP

>> Rsbr_N  Rsbr N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.51   4.6e+03      24      42 ..     107     125 ..      91     127 .. 0.61
   2 ?   12.2   0.2   1.6e-05      0.14      87     129 ..     155     198 ..     145     199 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.51
                 SS-.--HHHHHHHHHHHHH CS
      Rsbr_N  24 slqtisdevyektskefvd 42 
                 + q   + +yek+   f++
  EPX73754.1 107 ISQEDLEILYEKIYTSFIE 125
                 3344445566666666665 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 1.6e-05
                 HHHHHHH...T--TT--HHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      Rsbr_N  87 vlellseed.dvvkeeqslelleeieewidpivnelvneYsgsW 129
                 v +++ + + ++++ee +le++++  e+i +   + vn+Y++sW
  EPX73754.1 155 VSTYIPSWNsEKQDEETFLECFNKASEFIGSWFVRTVNNYASSW 198
                 45555554447889999*************************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       513  (0.0286129); expected 358.6 (0.02)
Passed bias filter:                      487  (0.0271627); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.44
# Mc/sec: 2192.75
//
Query:       EPX73755.1  [L=248]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.3e-05   25.4   0.0    5.3e-05   23.4   0.0    1.9  1  CTP_transf_like  Cytidylyltransferase-like
  ------ inclusion threshold ------
      0.013   15.0   0.1        1.4    8.3   0.0    2.3  2  ATP-sulfurylase  ATP-sulfurylase
      0.018   15.0   0.0       0.03   14.3   0.0    1.3  1  HIGH_NTase1_ass  Cytidyltransferase-related C-terminal region
       0.17   11.9   0.0        1.8    8.5   0.0    2.4  2  Med25            Mediator complex subunit 25 PTOV activation 


Domain annotation for each model (and alignments):
>> CTP_transf_like  Cytidylyltransferase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.0   1.2e-08   5.3e-05       3     142 ..      38     219 ..      36     220 .. 0.64

  Alignments for each domain:
  == domain 1  score: 23.4 bits;  conditional E-value: 1.2e-08
                      EE--TT--HHHHHHHHHHHHHSSESEEEEEESSTHCSST-SCSSTHHHHHHHHHHH.TTCTTEEEEEEESEHH........HHHHHTTTTEEEE CS
  CTP_transf_like   3 gGtFDpiHlGHlrlleqakklleedlivgvpsdeppkkkkkplasaeeRlemlela.kevdevisvdpweltr........evlkklkpdklyl 87 
                      + +F+p+H++Hl + + + +  ++  + ++  ++ +k +   +as++ Rl+ml+++ +  ++  sv+   ++         ++ k   p++   
       EPX73755.1  38 DSSFNPPHNAHLGMCHFVPEGSHL--VLLLSIANADKAE--APASLDVRLAMLKALyRLIKN-RSVSIALCKYplfaekcvCLSKYCSPKEQTY 126
                      669**************9987776..6677777777765..99************9844433.2333222222335566543333333335555 PP

                      EEEHHHHHHHHCHH.........HHHHHHHHHHHEEEEEE.............................HTTCEEEEEEECCTTTCSHHHHHH CS
  CTP_transf_like  88 vigadvledfsewk.........eleeilgnvklvvvsrp.............................ekqanvllkaekrtngiSstkire 142
                      ++g d+l  + ++k          ++  +++ ++v++ r+                              ++ ++  ++ +  +++Sst ir+
       EPX73755.1 127 LVGFDTLIRILNCKyypensiqkVMNPFFERSRIVCFYREtddptadelqelypsklekgelqdvalewSSRIQFARLNGNMGKNVSSTAIRK 219
                      666666666656556665544444444555556666666677777777777777777777777788865555555577777778888888887 PP

>> ATP-sulfurylase  ATP-sulfurylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.0   0.00032       1.4      29      93 ..      42     105 ..      39     110 .. 0.80
   2 ?    4.5   0.0    0.0048        22     179     210 ..     210     242 ..     185     244 .. 0.87

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00032
                      S---HHHHHHHHHHHHHTSEEEEEEEB-SB-STT.STTHHHHHHHHHHHHHHHS-GGGEEE-BB-S CS
  ATP-sulfurylase  29 nplHraHeellkraleeeadglllhplvgptkpg.dvpaevrvrayealieeylpkdrvvlallpl 93 
                      np+H+aH  ++    e + + +ll  +  + k +   + +vr++  +al +  +++++v +al ++
       EPX73755.1  42 NPPHNAHLGMCHFVPE-GSHLVLLLSIANADKAEaPASLDVRLAMLKALYRL-IKNRSVSIALCKY 105
                      9***************.77766666666666655267899999999999998.8888888887766 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.0048
                      EE--HHHHHCCHHTT.----TTTS-HHHHHHHH CS
  ATP-sulfurylase 179 esisgtelrkllreg.eeipewfsrpevlkvLr 210
                      +++s+t +rk +++g ee+ + ++ +evl++++
       EPX73755.1 210 KNVSSTAIRKAISSGdEEVQARMIPTEVLSIIK 242
                      789*********9984689999*******9986 PP

>> HIGH_NTase1_ass  Cytidyltransferase-related C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   6.7e-06      0.03      73     106 ..     211     244 ..     185     246 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 6.7e-06
  HIGH_NTase1_ass  73 GvsGtkireavvegnlekvkdmlPeetievlkee 106
                       vs t ir+a++ g+ e  + m+P+e ++++k+ 
       EPX73755.1 211 NVSSTAIRKAISSGDEEVQARMIPTEVLSIIKDV 244
                      49***************99***********9975 PP

>> Med25  Mediator complex subunit 25 PTOV activation and synapsin 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.0   0.00041       1.8      52      92 ..     137     179 ..     121     201 .. 0.80
   2 ?    0.3   0.0      0.13     6e+02      11      52 ..     193     237 ..     189     243 .. 0.70

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00041
       Med25  52 Limqlipkqllnalkeallknsrvvvfnftakd..lealksLa 92 
                 L+ +  p++ ++++++++++ sr v f  +++d  +++l++L+
  EPX73755.1 137 LNCKYYPENSIQKVMNPFFERSRIVCFYRETDDptADELQELY 179
                 67778899*******************9844321145555554 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.13
       Med25  11 lewqekak..deeskqkrslpcqv.sasvkegepelkaekwPekL 52 
                 lew+ + +  + + ++ +++  +   +++++g++e++a   P+++
  EPX73755.1 193 LEWSSRIQfaRLNGNMGKNVSSTAiRKAISSGDEEVQARMIPTEV 237
                 677777666644555555555554388899999999999999874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       474  (0.0264376); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1752.96
//
Query:       EPX73756.1  [L=1703]
Description: DEAD/DEAH box helicase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.7e-15   55.8   0.0    8.8e-15   54.9   0.0    1.5  1  DEAD        DEAD/DEAH box helicase
    8.5e-11   42.1   2.0    8.7e-10   38.9   0.0    2.7  3  ResIII      Type III restriction enzyme, res subunit
      9e-08   32.4   0.1    2.4e-07   31.1   0.1    1.7  1  Helicase_C  Helicase conserved C-terminal domain
     0.0023   17.4   0.0      0.062   12.7   0.0    2.4  2  PhoH        PhoH-like protein


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.9   0.0     2e-18   8.8e-15       3     170 ..     727     885 ..     725     890 .. 0.73

  Alignments for each domain:
  == domain 1  score: 54.9 bits;  conditional E-value: 2e-18
                 HHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCSEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   3 iQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvdiv 101
                  Q+++++++ ++++v+v a+T sGKT + + ++  +v+  +g++   +++v+Pt++L++q   ++  ++++    +  ++ +v +rd + +   +++++
  EPX73756.1 727 WQRQTLDILDKDESVFVVAPTSSGKTFISFYAME-KVL--RGNDDGVVIYVAPTKALVNQLSAEVYARFNKHYPHAGQTVWSVYTRDYRINNPTNCQVL 822
                 5999*99999*****************9666666.555..599999***************9999877775332222223333333333333378**** PP

                 EEEHHHHHHHHHCTSSH...CTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBS CS
                 xxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 102 vgtpgrlddllstgkln...lsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlp 170
                 ++ p  l+++l +  l    + +++ +++DE++++ +++ +  +++ l  l    +  +    +++lSAT+ 
  EPX73756.1 823 ITVPHVLQSMLLQPALAnswCPKIKRIIFDEIHCIGQMEDGM-VEEQLLLL----A--P--CPIVALSATVG 885
                 *********885555444679999*************94333.33333333....1..2..33999999985 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   1.1      0.87   3.9e+03      79     122 ..     442     500 ..     429     518 .. 0.60
   2 ?   -3.1   4.7       1.5   6.8e+03      74     130 ..     499     557 ..     488     562 .. 0.60
   3 !   38.9   0.0   1.9e-13   8.7e-10      19     169 ..     735     884 ..     715     886 .. 0.76

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.87
                 GG.....GEEEESSS-B--..........-SEEEEEHHHHHHTH............... CS
      ResIII  79 seayke.igkkvsgdkkka...kekdstnkkilvttiqsldadseee...........e 122
                 s+ y++ +  k++gd++k      + + + +++++ iq+   +++ +           +
  EPX73756.1 442 SKRYDDiNAIKKTGDSNKDkrqVDRMRRQDQFFISHIQKYAGSLTGAkggqlkrqtifT 500
                 44444443333444444443444677788999999999998888665666665555552 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 1.5
                 GGGGTGG.........GEEEESSS-B--.......-SEEEEEHHHHHHTH........HHHT CS
      ResIII  74 fkkflseayke.....igkkvsgdkkkakekdstnkkilvttiqsldadseeeeeeseellr 130
                 f++ ++ea+++     ++k + +dk+     +++ k++ +++ +++ a++  +++e+e++++
  EPX73756.1 499 FTQSSKEAKAQneeapKNKAKAKDKE---TASKKGKSVKLSKAEMIRAEIAAKKSEKEDNRN 557
                 45555555444444333444444444...4589999************99665444444333 PP

  == domain 3  score: 38.9 bits;  conditional E-value: 1.9e-13
                 ....TTSEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSHHHHHHHH.HHGGGGTGG....GEEEESSS-B--.......-SEEEEEHHHHHH CS
      ResIII  19 lkskrdkrglikmaTGtGKTlvaaklierllkkgkeekflflvprkslleqtl.eefkkflseaykeigkkvsgdkkkakekdstnkkilvttiqslda 116
                 l  ++d+ ++++++T +GKT++++ ++e++l+ ++   ++ ++p+k+l++q+  e +++f + + ++ ++++s  +++ + ++ tn+++l+t  + l++
  EPX73756.1 735 L--DKDESVFVVAPTSSGKTFISFYAMEKVLRGNDDGVVIYVAPTKALVNQLSaEVYARFNKHYPHAGQTVWSVYTRDYRINNPTNCQVLITVPHVLQS 831
                 2..689999***********************99999****************5334455555444444444444444434599999****99999999 PP

                 TH........HHHTTT-S....EEEEETGGGTTS.T..TTHHHHHT---SEEEEEESS- CS
      ResIII 117 dseeeeeeseellrdrfd....viiiDEaHrlgakk..swreilekfkeavllglTATp 169
                  +       + +l ++       ii+DE H +g+++   ++e l  + ++ +++l+AT 
  EPX73756.1 832 ML------LQPALANSWCpkikRIIFDEIHCIGQMEdgMVEEQLLLLAPCPIVALSATV 884
                 99......444444443345559***********96656666777889999******96 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.1   0.1   5.3e-11   2.4e-07      43     111 .]    1213    1282 ..    1188    1282 .. 0.89

  Alignments for each domain:
  == domain 1  score: 31.1 bits;  conditional E-value: 5.3e-11
                  EEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSS.SSHHHHHHHHTTSSSTT CS
  Helicase_C   43 vavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlp.rnvtsyiqriGRtgRag 111 
                  + v+h+ l+ + r+ +   f+ g+ +v+iat+ ++ Gi++p+ ++V+  d    n  +++q++GR+gR g
  EPX73756.1 1213 IGVHHSGLNRRYRQLVEVLFRCGQLTVVIATRTLSLGINMPCRTVVFLGDNLqLNALNFHQAAGRAGRRG 1282
                  6789*************************************999999887654889************75 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0     0.037   1.6e+02      74     140 ..     204     269 ..     198     271 .. 0.84
   2 !   12.7   0.0   1.4e-05     0.062       8      57 ..     727     776 ..     724     789 .. 0.76

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.037
                 ----TTTHHHHHHHTTTS-TTCHHHHHHTTSEEEEEGGGGTT--B-SEEEEE-SGGG--HHHHHHHH CS
        PhoH  74 ekvdpylrplydaLkdllgaekvekllekgkievaplaymRGrTlndafvilDEAQnttkeqmkmfl 140
                 e ++   + + d L+++ ++++  +l  +  i   +++ mR +Tl+ a +i  E+  +++   km++
  EPX73756.1 204 EAIEEASKVISDYLEKFGKNRQAIDLP-EVDIDACSTNAMRVQTLAVAWLIKNESSPLSRDLAKMII 269
                 667778888999999988777776666.566***********************9999999999986 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 1.4e-05
                 HHHHHHHHHHH-SEEEEE--TTSSTTHHHHHHHHHHHHTTS-SEEEEEE- CS
        PhoH   8 eQkeylealkkndivfaiGpaGtGKtylavalavealkkkkvkriiltrp 57 
                  Q+++l++l+k + vf+++p+ +GKt+++  +  ++l+ ++   +i++ p
  EPX73756.1 727 WQRQTLDILDKDESVFVVAPTSSGKTFISFYAMEKVLRGNDDGVVIYVAP 776
                 59**************************9865544444444444555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1703 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1626  (0.0906911); expected 358.6 (0.02)
Passed bias filter:                      669  (0.0373138); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.12u 0.35s 00:00:01.47 Elapsed: 00:00:00.51
# Mc/sec: 9975.54
//
Query:       EPX73757.1  [L=221]
Description: zf-CCHC type zinc finger protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.1e-10   39.0  28.9     0.0011   18.9   0.9    4.4  4  zf-CCHC         Zinc knuckle
    8.1e-07   28.7  30.7     0.0013   18.5   1.8    4.3  4  zf-CCHC_2       Zinc knuckle
  ------ inclusion threshold ------
       0.12   12.2  24.2        1.2    9.0   0.4    4.4  4  zf-CCHC_4       Zinc knuckle
        5.1    7.3  10.0         11    6.2   2.9    3.8  2  NinD            Family of unknown function


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.9   2.5e-07    0.0011       3      18 .]      81      96 ..      79      96 .. 0.93
   2 !   14.2   0.6   7.5e-06     0.034       2      18 .]     103     119 ..     102     119 .. 0.93
   3 !    9.5   1.7   0.00025       1.1       2      16 ..     127     141 ..     126     143 .. 0.91
   4 !   12.1   4.9   3.6e-05      0.16       2      18 .]     154     170 ..     153     170 .. 0.93

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 2.5e-07
                TSSSSSSSSTTTTSTS CS
     zf-CCHC  3 CynCGepGHiardCpk 18
                C+ C +pGHi  +Cp+
  EPX73757.1 81 CFACRKPGHIVQNCPE 96
                ***************6 PP

  == domain 2  score: 14.2 bits;  conditional E-value: 7.5e-06
                 CTSSSSSSSSTTTTSTS CS
     zf-CCHC   2 kCynCGepGHiardCpk 18 
                  C++CG+  H  + Cpk
  EPX73757.1 103 ICFRCGSKEHSLNACPK 119
                 5**************97 PP

  == domain 3  score: 9.5 bits;  conditional E-value: 0.00025
                 CTSSSSSSSSTTTTS CS
     zf-CCHC   2 kCynCGepGHiardC 16 
                 +C+ C e GH+a +C
  EPX73757.1 127 VCFICHEKGHLAGQC 141
                 6***********888 PP

  == domain 4  score: 12.1 bits;  conditional E-value: 3.6e-05
                 CTSSSSSSSSTTTTSTS CS
     zf-CCHC   2 kCynCGepGHiardCpk 18 
                 +C  CG++ H+a+dC++
  EPX73757.1 154 GCKFCGSIHHYAKDCDQ 170
                 7**************96 PP

>> zf-CCHC_2  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   1.8     3e-07    0.0013       6      21 .]      81      96 ..      80      96 .. 0.96
   2 !   15.2   0.5   3.2e-06     0.014       5      21 .]     103     119 ..     103     119 .. 0.95
   3 !   11.1   3.0   6.2e-05      0.28       5      15 ..     127     137 ..     127     143 .. 0.88
   4 ?    0.4   3.9      0.13   5.9e+02       6      19 ..     155     168 ..     155     170 .. 0.94

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 3e-07
   zf-CCHC_2  6 ChiCgkkGHyIqdCPt 21
                C +C k+GH +q+CP+
  EPX73757.1 81 CFACRKPGHIVQNCPE 96
                ***************6 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 3.2e-06
   zf-CCHC_2   5 vChiCgkkGHyIqdCPt 21 
                 +C +Cg+k+H  + CP+
  EPX73757.1 103 ICFRCGSKEHSLNACPK 119
                 8***************6 PP

  == domain 3  score: 11.1 bits;  conditional E-value: 6.2e-05
   zf-CCHC_2   5 vChiCgkkGHy 15 
                 vC iC+ kGH 
  EPX73757.1 127 VCFICHEKGHL 137
                 8*********6 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.13
   zf-CCHC_2   6 ChiCgkkGHyIqdC 19 
                 C+ Cg+  Hy +dC
  EPX73757.1 155 CKFCGSIHHYAKDC 168
                 999*********** PP

>> zf-CCHC_4  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.4   0.00026       1.2      32      48 ..      79      95 ..      78      96 .. 0.93
   2 ?    7.9   0.7   0.00055       2.5      32      49 .]     102     119 ..     101     119 .. 0.93
   3 ?    5.0   1.4    0.0044        20      33      48 ..     127     142 ..     124     143 .. 0.91
   4 ?    4.2   2.3    0.0077        35      34      48 ..     155     169 ..     152     170 .. 0.92

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00026
   zf-CCHC_4 32 sfCyiCgvlGHsdkrCd 48
                +fC+ C+  GH +++C+
  EPX73757.1 79 KFCFACRKPGHIVQNCP 95
                69**************8 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.00055
   zf-CCHC_4  32 sfCyiCgvlGHsdkrCdk 49 
                 s+C+ Cg   Hs ++C+k
  EPX73757.1 102 SICFRCGSKEHSLNACPK 119
                 79**************95 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.0044
   zf-CCHC_4  33 fCyiCgvlGHsdkrCd 48 
                 +C+iC   GH + +C+
  EPX73757.1 127 VCFICHEKGHLAGQCE 142
                 7**************7 PP

  == domain 4  score: 4.2 bits;  conditional E-value: 0.0077
   zf-CCHC_4  34 CyiCgvlGHsdkrCd 48 
                 C  Cg + H +k+Cd
  EPX73757.1 155 CKFCGSIHHYAKDCD 169
                 9*************8 PP

>> NinD  Family of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   2.9    0.0025        11      14      47 ..      67     101 ..      45     104 .. 0.82
   2 ?    2.2   1.1     0.044     2e+02       4      14 ..     104     114 ..     101     153 .. 0.63

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0025
        NinD  14 yrf.rPnqPywnrwclrcersPvGvlPlPeekedv 47 
                  r  r n  y +++c+ c +    v   Pe k dv
  EPX73757.1  67 RRIrRQNMRYKDKFCFACRKPGHIVQNCPEAKSDV 101
                 344268999*********9988889999****998 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.044
        NinD   4 cyrcGeskedy 14 
                 c+rcG   +  
  EPX73757.1 104 CFRCGSKEHSL 114
                 88888554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       756  (0.0421663); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.45
# Mc/sec: 1475.45
//
Query:       EPX73758.1  [L=487]
Description: transcription factor zf-C2H2 type [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.1e-06   28.7   6.3     0.0001   22.5   0.3    3.8  4  zf-C2H2         Zinc finger, C2H2 type
    4.1e-05   23.8  12.8    0.00012   22.3   0.2    4.6  4  zf-H2C2_2       Zinc-finger double domain
     0.0011   19.6   9.6       0.25   12.3   0.1    3.8  3  zf-C2H2_4       C2H2-type zinc finger
  ------ inclusion threshold ------
       0.84    9.6  11.5       0.79    9.7   1.9    3.7  3  Zn_ribbon_SprT  SprT-like zinc ribbon domain
        1.6    9.2   4.8        3.4    8.2   0.4    3.0  3  zf-met          Zinc-finger of C2H2 type


Domain annotation for each model (and alignments):
>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.2      0.57     2e+03       1       6 [.     260     265 ..     260     267 .. 0.92
   2 ?   -4.2   0.9         5   1.8e+04      17      23 .]     406     413 ..     406     413 .. 0.81
   3 !   17.1   1.1   1.6e-06    0.0056       1      23 []     433     455 ..     433     455 .. 0.97
   4 !   22.5   0.3   2.9e-08    0.0001       1      23 []     461     485 ..     461     485 .. 0.98

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.57
                 EEETTT CS
     zf-C2H2   1 ykCpdC 6  
                 ++Cp+C
  EPX73758.1 260 FVCPGC 265
                 89**** PP

  == domain 2  score: -4.2 bits;  conditional E-value: 5
                 HHHHHC.C CS
     zf-C2H2  17 krHirt.H 23 
                 ++Hi + H
  EPX73758.1 406 RVHIARrH 413
                 57999988 PP

  == domain 3  score: 17.1 bits;  conditional E-value: 1.6e-06
                 EEETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                 y+C++C + F+r+s+Lk H  +H
  EPX73758.1 433 YRCTECLQGFSRPSSLKIHTYSH 455
                 9******************9888 PP

  == domain 4  score: 22.5 bits;  conditional E-value: 2.9e-08
                 EEET..TTTEEESSHHHHHHHHHCC CS
     zf-C2H2   1 ykCp..dCgksFkrksnLkrHirtH 23 
                 ++C+  +Cgk F+ +sn++rH+r+H
  EPX73758.1 461 FVCDyvGCGKAFNVRSNMRRHQRIH 485
                 89**********************9 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.3     0.097   3.5e+02      14      21 ..     259     266 ..     241     268 .. 0.64
   2 ?    3.8   0.0     0.024        87      13      25 ..     417     443 ..     406     444 .. 0.61
   3 !   22.3   0.2   3.4e-08   0.00012       2      25 ..     448     473 ..     447     473 .. 0.90
   4 ?    1.3   0.6      0.15   5.5e+02       1       9 [.     477     485 ..     477     486 .. 0.91

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.097
   zf-H2C2_2  14 pyeCplCd 21 
                 p+ Cp C+
  EPX73758.1 259 PFVCPGCA 266
                 89*****7 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.024
   zf-H2C2_2  13 k..............pyeCplCdkaFk 25 
                 +              +y C +C   F+
  EPX73758.1 417 RksnqqsaaissstvRYRCTECLQGFS 443
                 33344446655555579*****99997 PP

  == domain 3  score: 22.3 bits;  conditional E-value: 3.4e-08
   zf-H2C2_2   2 LrrHirkHtgekpyeCp..lCdkaFk 25 
                 L+ H+++Htge+p+ C+   C+kaF+
  EPX73758.1 448 LKIHTYSHTGERPFVCDyvGCGKAFN 473
                 888**************866****95 PP

  == domain 4  score: 1.3 bits;  conditional E-value: 0.15
   zf-H2C2_2   1 nLrrHirkH 9  
                 n rrH+r H
  EPX73758.1 477 NMRRHQRIH 485
                 789*****9 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.2       1.5   5.3e+03       1       6 [.     260     265 ..     260     268 .. 0.83
   2 !   11.1   0.9   0.00017      0.59       1      23 [.     433     455 ..     433     456 .. 0.94
   3 !   12.3   0.1   7.1e-05      0.25       1      23 [.     461     485 ..     461     486 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 1.5
   zf-C2H2_4   1 fkCpiC 6  
                 f Cp C
  EPX73758.1 260 FVCPGC 265
                 89**** PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.00017
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlkth 23 
                 ++C+ C + Fs++++L+ H  +h
  EPX73758.1 433 YRCTECLQGFSRPSSLKIHTYSH 455
                 89*****************8888 PP

  == domain 3  score: 12.3 bits;  conditional E-value: 7.1e-05
   zf-C2H2_4   1 fkCpi..CgksFsskkaLlrHlkth 23 
                 f C++  Cgk F+ +++++rH + h
  EPX73758.1 461 FVCDYvgCGKAFNVRSNMRRHQRIH 485
                 78**********99999*****998 PP

>> Zn_ribbon_SprT  SprT-like zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.2     0.024        87       6      27 ..     261     285 ..     260     287 .. 0.76
   2 ?    9.7   1.9   0.00022      0.79       5      25 ..     433     453 ..     432     465 .. 0.91
   3 ?    1.0   0.2      0.12   4.2e+02       8      23 ..     466     481 ..     466     485 .. 0.91

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.024
  Zn_ribbon_SprT   6 rCtgCgreythhlsirrhn...YrC 27 
                     +C+gC +++  +l   + n    rC
      EPX73758.1 261 VCPGCAQNQQNRLNPHPNNdgfVRC 285
                     7*****9988887777766666666 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00022
  Zn_ribbon_SprT   5 YrCtgCgreythhlsirrhnY 25 
                     YrCt C + + +++s + h+Y
      EPX73758.1 433 YRCTECLQGFSRPSSLKIHTY 453
                     *******************96 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.12
  Zn_ribbon_SprT   8 tgCgreythhlsirrh 23 
                     +gCg+ +++++  rrh
      EPX73758.1 466 VGCGKAFNVRSNMRRH 481
                     68*********99999 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.1     0.089   3.2e+02      10      23 ..       1      14 [.       1      15 [. 0.89
   2 ?    8.2   0.4   0.00094       3.4       1      23 [.     433     455 ..     433     456 .. 0.94
   3 ?   -2.6   0.0       2.3   8.2e+03       6      20 ..     468     482 ..     468     484 .. 0.82

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.089
      zf-met 10 fnsesqlksHlqGK 23
                ++se+++  H +G 
  EPX73758.1  1 MSSETSAAEHTNGA 14
                68**********95 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.00094
      zf-met   1 fyCelCnvtfnsesqlksHlqGK 23 
                 + C  C   f+ +s+lk H  ++
  EPX73758.1 433 YRCTECLQGFSRPSSLKIHTYSH 455
                 78*****************9997 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 2.3
      zf-met   6 CnvtfnsesqlksHl 20 
                 C + fn +s+++ H 
  EPX73758.1 468 CGKAFNVRSNMRRHQ 482
                 888888899999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (487 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       997  (0.0556082); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 3481.55
//
Query:       EPX73759.1  [L=121]
Description: electron carrier protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.5e-12   46.6   0.1    7.6e-12   45.8   0.1    1.3  1  DUF1687   Protein of unknown function (DUF1687)


Domain annotation for each model (and alignments):
>> DUF1687  Protein of unknown function (DUF1687)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.8   0.1   4.2e-16   7.6e-12       7     125 ..       6     105 ..       3     107 .. 0.79

  Alignments for each domain:
  == domain 1  score: 45.8 bits;  conditional E-value: 4.2e-16
     DUF1687   7 spdvitlFhnakspa.SnkllklLkkasakasekakedqereefelevtekfPTlDQlktilsyvgkskaksvlksafpelseilkkfkkdeeskkklk 104
                 +++++tlF+ +   +  +kl +++     ++s       ++ +++l+v+ ++PT DQ++++l++++k++++  +++a+ +++++l+k k+d        
  EPX73759.1   6 TKRILTLFARKRNTSvEEKLTEFMILGERTNS-------KQFRYQLQVELDPPTQDQMSIMLNSMQKEQSHLLISGAT-SVQDALNKYKND-------- 88 
                 46777777776665534444444444333332.......3468*************************9999999999.**********99........ PP

     DUF1687 105 elvkedlFkrplvVDWdngki 125
                       +F+rp +VDWdngki
  EPX73759.1  89 ----FRTFRRPCLVDWDNGKI 105
                 ....799************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       755  (0.0421105); expected 358.6 (0.02)
Passed bias filter:                      526  (0.0293379); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.36s 00:00:00.93 Elapsed: 00:00:00.56
# Mc/sec: 652.14
//
Query:       EPX73760.1  [L=299]
Description: peptidase family A22 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-78  264.1   7.0    3.6e-70  236.7   4.4    2.0  2  Peptidase_A22B  Signal peptide peptidase
    2.3e-05   24.0  13.6     0.0013   18.2  13.7    2.5  1  SPP             Signal-peptide peptidase, presenilin aspartyl
  ------ inclusion threshold ------
        1.5    7.0   7.4       0.98    7.6   6.0    1.4  1  DUF2070         Predicted membrane protein (DUF2070)


Domain annotation for each model (and alignments):
>> Peptidase_A22B  Signal peptide peptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.6   0.0   1.6e-10   9.3e-07       4      61 ..      28      85 ..      25      91 .. 0.92
   2 !  236.7   4.4   6.1e-74   3.6e-70      89     283 ..      91     280 ..      81     281 .. 0.96

  Alignments for each domain:
  == domain 1  score: 28.6 bits;  conditional E-value: 1.6e-10
                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Peptidase_A22B  4 ekaetitkkeaillpitaslvlllLylffkslakeflvvlltvlivllgvvalaslls 61
                    ++ +ti+kk a l+p++++l+l+++yl+++++ ke+++++l+ +  +++ +++ ++l+
      EPX73760.1 28 DEKHTINKKLAALFPVFGGLTLVGMYLILRYYGKEYIQYILQGYGSFAAAMCFLRTLN 85
                    56789*********************************************99988876 PP

  == domain 2  score: 236.7 bits;  conditional E-value: 6.1e-74
                     XXXXXXXX------S--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Peptidase_A22B  89 aeivalllsiviavlwllkrhwilndilglalailviellrlpslkvgalLLvglflYDifwVFgtdvmvevAkeldiPillklPqlsneieeas 183
                      + ++ ll+i+i++ +l ++hw ++++l+++la ++i+++r++s+ +ga+LL++lf+YDi++VFgtdvmv+vA+++diP ++++P+    +++  
      EPX73760.1  91 GKSISGLLTIAITIHYLKTKHWFTSNLLAWTLAANSISMMRIDSFATGAVLLACLFIYDIYFVFGTDVMVTVATGIDIPAKYVIPN----FTKPG 181
                     5668899*******************************************************************************....99*** PP

                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Peptidase_A22B 184 kfsiLGlGDivlPGllialllrfdiskkkttaeskeaqgkYfvvtlvaYvlgLlitivalalfkaaQPALLYlvPatllvllllallrgelkklw 278
                     +fs+LGlGDiv+PGl+++l++rfd+++ ++++ +k++ + Yf +tl+aY+lgL it  al++f+aaQPALLYl Pa +l++ll+a++r+el++l+
      EPX73760.1 182 RFSMLGLGDIVMPGLMVSLMRRFDVHNAQKSK-DKRTSTPYFKWTLIAYTLGLAITNGALYYFRAAQPALLYLSPASILAPLLVACYRQELTSLF 275
                     ****************************9987.699999******************************************************** PP

                     XXXXX CS
  Peptidase_A22B 279 neees 283
                     +++++
      EPX73760.1 276 AFRSE 280
                     99875 PP

>> SPP  Signal-peptide peptidase, presenilin aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2  13.7   2.2e-07    0.0013      89     219 ..      89     200 ..      37     267 .. 0.81

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 2.2e-07
         SPP  89 glvnlaslvvaialvvllyaypeWyvidlaGvilavGvsalfGislgvlpavvllialavydaisvyktkhmialaegvvdlklPillvvPetlaysfv 187
                  l   +s +++ia+++  ++ + W+  +l+   la    +++ i  +  +  vll  l +yd   v++t  m+++a g+   ++P  +v+P+   ++  
  EPX73760.1  89 TLGKSISGLLTIAITIHYLKTKHWFTSNLLAWTLAANSISMMRID-SFATGAVLLACLFIYDIYFVFGTDVMVTVATGI---DIPAKYVIPN---FT-- 178
                 444567778999***********************9999999996.344556799999******************995...99*******6...32.. PP

         SPP 188 eeafeeaeeaearnvlfiGlGdavlPsilvvs 219
                      + +        ++GlGd+v+P ++v  
  EPX73760.1 179 -----KPG-----RFSMLGLGDIVMPGLMVSL 200
                 .....333.....3569************975 PP

>> DUF2070  Predicted membrane protein (DUF2070)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   6.0   0.00016      0.98      38     143 ..      86     185 ..      46     235 .. 0.81

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.00016
     DUF2070  38 lfgillfglpalvaflltlpvlrilggrltykrslflalltelivviisllaillsallqalvllalvlslalvfalrllvlvavsdesllkavlpali 136
                   ++l   ++ l+++++t + l++ ++ +t++  ++  +++ + ++ i+ +a+ ++     l+   ++ ++ +vf+  ++v+va++ + + k+v+p ++
  EPX73760.1  86 CKSTLGKSISGLLTIAITIHYLKT-KHWFTSNLLAWTLAANSISMMRIDSFATGAV-----LLACLFIYDIYFVFGTDVMVTVATGIDIPAKYVIPNFT 178
                 556677777888888888888855.3449999998888888888777777777777.....456889999***************************99 PP

     DUF2070 137 qpllail 143
                  p  + +
  EPX73760.1 179 KPGRFSM 185
                 9876655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (299 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       583  (0.0325172); expected 358.6 (0.02)
Passed bias filter:                      307  (0.0171231); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.35s 00:00:01.01 Elapsed: 00:00:00.55
# Mc/sec: 1622.64
//
Query:       EPX73761.1  [L=692]
Description: RNase P and RNase MRP subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-59  201.6   4.9    2.9e-59  200.5   4.9    1.6  1  POP1      Ribonucleases P/MRP protein subunit POP1
    6.3e-32  109.8   0.6    6.3e-32  109.8   0.6    2.0  2  POPLD     POPLD (NUC188) domain
    0.00017   21.0   0.0       0.78    9.1   0.0    2.9  3  GCV_T     Aminomethyltransferase folate-binding domain
  ------ inclusion threshold ------
       0.09   12.8   0.1       0.35   10.9   0.0    2.0  2  DUF3161   Protein of unknown function (DUF3161)


Domain annotation for each model (and alignments):
>> POP1  Ribonucleases P/MRP protein subunit POP1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  200.5   4.9   6.5e-63   2.9e-59       1     204 [.      43     234 ..      43     235 .. 0.88

  Alignments for each domain:
  == domain 1  score: 200.5 bits;  conditional E-value: 6.5e-63
        POP1   1 FvksrefEIkaleealkkskkasstraFQslPrklRRRtaSHnvkRvPkrlrarakremakdntptvearkrkkkslskrkrlrlrtakkllrlaakkk 99 
                 Fv+sr+fEI+al++a+++sk++s++raFQ+lPr lRRR+aSHn+kR+Pk lr+ra +em+ +++ t+ ++ +k++ +    r+ +r ++kl+r a+  k
  EPX73761.1  43 FVESRSFEISALQDAMHRSKHSSAQRAFQALPRCLRRRAASHNIKRIPKALRDRAYYEMQLSSSATTPVTPSKQRLK----RFIKRLHRKLARHANSPK 137
                 9*************************************************************988888888887444....444444555555444444 PP

        POP1 100 akkalaakkeekklnnkkgskdktkknklaeppkkkikylkrqkektWLpTHvwhaKRakmikrwgfaiplsptqKcyrlthRaaksrgavawDtSYms 198
                  +++         + ++ +s+++t++ +l   +  + k+  rq +k WLpTH+w+aKRa+mi++wg+aip spt+K+yr+thRaa   +a+a+D+SY  
  EPX73761.1 138 VTNS--------GQLRTEHSTEDTRIPTLPAVKLVNGKFAGRQLRKIWLPTHLWTAKRAHMINAWGYAIPESPTEKSYRPTHRAAFCLNAIAFDMSYQP 228
                 4442........33456789999***************************************************************************9 PP

        POP1 199 tieleg 204
                 ++ ++g
  EPX73761.1 229 LFAITG 234
                 999987 PP

>> POPLD  POPLD (NUC188) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.1       2.5   1.1e+04      51      67 ..     397     413 ..     390     430 .. 0.62
   2 !  109.8   0.6   1.4e-35   6.3e-32       1      92 []     467     564 ..     467     564 .. 0.99

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 2.5
       POPLD  51 kagekeekeeeeeaeek 67 
                 + g++ +++e++++e+k
  EPX73761.1 397 NLGQQGNEKEKDNKENK 413
                 55555555555555444 PP

  == domain 2  score: 109.8 bits;  conditional E-value: 1.4e-35
       POPLD   1 gwdlilPwgwglpfwlsLvrvg.vrvgGlrerrqlalesgkpyfPddypdtkagekeekeeeeeaeekwerkPpskRvnysklg.....igspFacdW 92 
                 g+++i+Pw+ ++ fw++L++++ vr+gGl++ +q+a+e+++p+fP dypdtk+g+++e ++++ +ee w r+Pp+kRvn++++g     ig+pF+cdW
  EPX73761.1 467 GVTVIVPWEAAKFFWQKLMFRKgVRFGGLKNLHQIAFEKRMPFFPVDYPDTKSGQAYEVRRKQCNEEYWRRRPPAKRVNFENFGknfseIGDPFSCDW 564
                 689******************99*************************************************************************** PP

>> GCV_T  Aminomethyltransferase folate-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.11     5e+02       6      57 ..     184     236 ..     180     253 .. 0.85
   2 !    7.7   0.0   0.00044         2     104     165 ..     304     363 ..     296     383 .. 0.81
   3 !    9.1   0.0   0.00017      0.78     192     246 ..     466     517 ..     428     526 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.11
       GCV_T   6 kalgakfvefagwemPvqYasesikaehlavre.aaglfDvShmgkievsGpd 57 
                  a+ a++++  g+ +P +  ++s +  h+a    +a  fD+S+   + ++Gp 
  EPX73761.1 184 TAKRAHMINAWGYAIPESPTEKSYRPTHRAAFClNAIAFDMSYQPLFAITGPL 236
                 578899999999*9999999999999999877658889999999999999985 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.00044
       GCV_T 104 fllvvnaankekdlawlekaaekkdldvevedvteelallalqGPkarevlskll.gadlsel 165
                 +++ v a++   ++++l++ ++  d ++ ++d   +la + + GP a  +l +++ +  +++ 
  EPX73761.1 304 LVIRVHASAFLDVWNHLSS-IAVLDDQIAMHDWRLQLASFDILGPDANVILHDIFsD--VQSS 363
                 5566788888999999999.6669999****************************43..3332 PP

  == domain 3  score: 9.1 bits;  conditional E-value: 0.00017
       GCV_T 192 dGfeiyipaeeaeelweaLleagkeegvkpaGlgArdtlRlEaglrlyghdldee 246
                 +G+ +++p+e+a+ +w++L+     +gv+  Gl+ ++    E+ ++++  d  ++
  EPX73761.1 466 NGVTVIVPWEAAKFFWQKLM---FRKGVRFGGLKNLHQIAFEKRMPFFPVDYPDT 517
                 799****************7...6689*******************999887665 PP

>> DUF3161  Protein of unknown function (DUF3161)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   7.9e-05      0.35      11      40 ..      68      97 ..      63     115 .. 0.89
   2 ?   -3.5   0.0       2.4   1.1e+04       9      33 ..     579     603 ..     573     612 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 7.9e-05
     DUF3161 11 atfqsvPvlirrraklddinliykalydia 40
                  fq++P  +rrra   +i  i kal d a
  EPX73761.1 68 RAFQALPRCLRRRAASHNIKRIPKALRDRA 97
                57************************9987 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 2.4
     DUF3161   9 edatfqsvPvlirrraklddinliy 33 
                 +   f+ v v + +r  l d   iy
  EPX73761.1 579 TAQSFNRVEVRMVQRGALHDRARIY 603
                 5567888888888888888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (692 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       520  (0.0290033); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.76u 0.34s 00:00:01.10 Elapsed: 00:00:00.54
# Mc/sec: 3888.92
//
Query:       EPX73762.1  [L=228]
Description: wybutosine biosynthesis protein Tyw3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-61  206.4   0.0    3.9e-61  206.1   0.0    1.1  1  TYW3      Methyltransferase TYW3


Domain annotation for each model (and alignments):
>> TYW3  Methyltransferase TYW3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  206.1   0.0   2.2e-65   3.9e-61       2     212 ..      13     214 ..      12     215 .. 0.90

  Alignments for each domain:
  == domain 1  score: 206.1 bits;  conditional E-value: 2.2e-65
                 HHHHHHHHH....HHHHHCCHC-GGGHHHHHHHHC-SSEEEEEEES-EEEEE............EESSTT-STT-EEEEEESS---HHHHHHHHCS--. CS
        TYW3   2 rKakiLeeLsvpdtdkspkGsvDekirelideinsledlvTtSSCsGRvsvflegrksaeaeeeaaksggkkgggkwlfvsHdpvkeeellaelfglee 100
                 +K++iL+eL+++  d+spkG+ D++i +l+d+ins++d+vTtSSCsGR+s++             +   ++kggg wlfvsH+p++  el   l++++ 
  EPX73762.1  13 QKEQILKELASSLPDASPKGNPDSPIFPLLDVINSHPDWVTTSSCSGRISIY------------VQGLTSRKGGGYWLFVSHEPCT--ELPPPLETESV 97 
                 79**************************************************............45566677999**********7..55666666655 PP

                 .............SSEEEEEEE--EEEEEESSHHHHHHHHHHHHHCT-TT-EEEEECTTEEEEEEE---EEEEEEE........STS---HHHHHHHHH CS
        TYW3 101 eegsaksseseeeerlilfkfePmILHvlcrslesAqkllsaAleaGfreSGivslkkkkvivairsglklevpig........kellvseeylkllvk 191
                 + g+    + +e +r i+f fePmILHv++rsle+Aq+l ++A+++Gfre+Gi+  ++ k+ivair++lk++vpig        + l v++ey+++lvk
  EPX73762.1  98 DYGKV-PGTVSEGSREIQFAFEPMILHVQTRSLETAQHLQRVAMSCGFRETGIQGSTN-KYIVAIRTSLKIDVPIGvvdaseriQ-LYVTKEYMTWLVK 193
                 55544.44555559*****************************************887.**********************9754.************* PP

                 HHHHHHHHHHHHHHHHHHHC- CS
        TYW3 192 lanerfeenkkrierfeealk 212
                  + + f+en++r++r++++l+
  EPX73762.1 194 RTLDYFAENQRRMDRIKQQLE 214
                 ******************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       677  (0.0377601); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.34s 00:00:00.96 Elapsed: 00:00:00.55
# Mc/sec: 1250.98
//
Query:       EPX73763.1  [L=289]
Description: kinetochore protein Mal2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.7e-07   30.3   0.5    3.5e-05   23.9   0.4    2.9  2  CENP-O    Cenp-O kinetochore centromere component
  ------ inclusion threshold ------
      0.017   14.3   0.1      0.026   13.7   0.1    1.2  1  phiKZ_IP  phiKZ-like phage internal head proteins


Domain annotation for each model (and alignments):
>> CENP-O  Cenp-O kinetochore centromere component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0     0.016   1.4e+02      19      32 ..     103     117 ..      86     121 .. 0.70
   2 !   23.9   0.4   3.9e-09   3.5e-05      31     210 ..     138     282 ..     131     285 .. 0.79

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.016
      CENP-O  19 vLGiridvfsr.grf 32 
                 +LG+r+d +++  ++
  EPX73763.1 103 LLGVRFDFMMHpMQT 117
                 8********986555 PP

  == domain 2  score: 23.9 bits;  conditional E-value: 3.9e-09
      CENP-O  31 rflepYYvlLkrpseeekelrvhrHTvPafipLaklearylpapeeeeeakkkkektrkqdLkkFvrelrreLvayhnRldavedLrealgleakktee 129
                  f  p+Y++++     e++l++++ T+P f  L+  + +yl             ++++ + L+ F+ ++++ L+a   R + +++L ++++++      
  EPX73763.1 138 AFDAPHYIVFRVF---EDALSLYKYTIPNFFRLDAWADDYL-------------TSKHPDRLRLFLWRVHKLLIAHSCRKNILSQLNNTFQQHP----- 215
                 4889******984...34599********************.............2234578***************************999876..... PP

      CENP-O 130 eeseereeelesrelkivslsaadleakqiriewadgrvgrlvisd.dGevekavvig..esgkrdkeleeallggdgriedlv 210
                                  +++s adl  ++i+i+ +d+  +r+ +s  + +++++ +++   + +rd ++e +ll++d  +++l 
  EPX73763.1 216 ----------------FIQIS-ADLTYTHIEIDIHDQWKARFFCSMdSTRIQRCQIFEcrPTWHRDYTMEVTLLSEDVWLDTLH 282
                 ................67777.88888888888888888888888756677777766666444477777777777776666665 PP

>> phiKZ_IP  phiKZ-like phage internal head proteins
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   2.9e-06     0.026      84     141 ..      12      69 ..      10      76 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 2.9e-06
    phiKZ_IP  84 itsgierlskridkLeerlkslkkedekkeitiknaerlsidGeFilpylldnepkiv 141
                 +t+ i++l+ + ++L+ +lk l+ ++++k+ +++ + +l+++  F++p+l ++++  +
  EPX73763.1  12 LTEEISSLESKRETLIAKLKQLEEKQFSKKKKFPDPIKLFTQQPFQAPSLDFERLSGI 69 
                 7999******************************************998877776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       902  (0.0503096); expected 358.6 (0.02)
Passed bias filter:                      647  (0.0360868); expected 358.6 (0.02)
Passed Vit filter:                        95  (0.00529868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.34s 00:00:01.00 Elapsed: 00:00:00.54
# Mc/sec: 1603.83
//
Query:       EPX73764.1  [L=408]
Description: 2-OG-Fe(II) oxygenase superfamily protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.9e-25   89.9   0.2    5.9e-22   78.6   0.0    2.2  2  DIOX_N        non-haem dioxygenase in morphine synthesis N-te
    4.4e-18   65.6   0.1    1.2e-17   64.2   0.0    1.7  2  2OG-FeII_Oxy  2OG-Fe(II) oxygenase superfamily
  ------ inclusion threshold ------
       0.12   12.5   0.0        0.2   11.8   0.0    1.3  1  DUF3612       Protein of unknown function (DUF3612)


Domain annotation for each model (and alignments):
>> DIOX_N  non-haem dioxygenase in morphine synthesis N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.6   0.0   9.9e-26   5.9e-22       2      84 ..      26     111 ..      25     123 .. 0.91
   2 !    9.2   0.0   0.00032       1.9      86     116 ..     188     218 ..     170     220 .. 0.83

  Alignments for each domain:
  == domain 1  score: 78.6 bits;  conditional E-value: 9.9e-26
      DIOX_N   2 Pvidlspl..sddedraavaeqlreAcrevGffyvvnhgvpeelidelfeaareFFalPeeeKeklaksp.sfrGysrlgeektdg 84 
                 Pvid+ p+  +++ ++++++++lr+Ac+++Gff++vnh v++++i+++f+a++ FF+lP +eK+ l+k+  s+rGy+ l++  ++g
  EPX73764.1  26 PVIDFGPFiaNEPGAHEKIVKELRNACESTGFFQIVNHSVSKDVIKNAFRASKHFFELPFDEKLMLSKDMfSNRGYELLQDFVLEG 111
                 9*******95555889**************************************************99988*****9988877776 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00032
      DIOX_N  86 kldwkesfdlgtelpeddpagkplegpnqwP 116
                   + +esf++g +  ++++  +p++gpn+wP
  EPX73764.1 188 SNEFRESFYFGNDNLSKERLLRPFQGPNKWP 218
                 56789********766667999********9 PP

>> 2OG-FeII_Oxy  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       1.8   1.1e+04      73      94 ..      55      77 ..      53      83 .. 0.68
   2 !   64.2   0.0   2.1e-21   1.2e-17       4     100 ..     269     362 ..     266     363 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 1.8
                  TS-S----EEE-.---GTGSEEE CS
  2OG-FeII_Oxy 73 ngryksvlHrVl.pvnegerRvs 94
                   g+++ v H+V   v ++  R s
    EPX73764.1 55 TGFFQIVNHSVSkDVIKNAFRAS 77
                  57788899999866666555655 PP

  == domain 2  score: 64.2 bits;  conditional E-value: 2.1e-21
                   EEEEEEE-S---------EEEEEESSSEEEEEEE-TT---EEEE..TEEEE----TTEEEEEE-HHHHHHTTS-S----EEE----GTGSEEEEEEE CS
  2OG-FeII_Oxy   4 llvlnyypphpdpevilglgahtdaslltillqddvgglevfkd..gkwlrvppvdnslivniGdallflsngryksvlHrVlpvnegerRvsiayf 98 
                   +++l+y p ++ +    g+  htda  lt+++qd+v gl++++   ++++ +   +++l+ n Gd++ +l+n+ryks+ HrV+  + g++R++i +f
    EPX73764.1 269 IRLLRY-PSSFNRT---GVNDHTDADALTLMAQDEVRGLQILDPvtQSFVAISARPDALVANLGDIMAILTNNRYKSSVHRVC-NTSGHDRYTIPFF 360
                   677888.6665555...9***********************8777466***********************************.777788******* PP

                   E- CS
  2OG-FeII_Oxy  99 ie 100
                   ++
    EPX73764.1 361 LH 362
                   97 PP

>> DUF3612  Protein of unknown function (DUF3612)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   3.3e-05       0.2      87     139 ..      19      71 ..       6      86 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.3e-05
     DUF3612  87 gnnhvlcagidlnpaieaqgkdalslaeelkkacvknggsaaipkaikkdlvs 139
                 ++++ lc  id+ p i  + +   ++++el++ac ++g    +++++ kd+++
  EPX73764.1  19 QEEERLCPVIDFGPFIANEPGAHEKIVKELRNACESTGFFQIVNHSVSKDVIK 71 
                 456679********************************999999999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (408 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       414  (0.0230911); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.67u 0.33s 00:00:01.00 Elapsed: 00:00:00.55
# Mc/sec: 2249.92
//
Query:       EPX73765.1  [L=303]
Description: nucleotide-sugar phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.6e-46  157.6   0.0    5.3e-46  157.4   0.0    1.0  1  Hydrolase_3   haloacid dehalogenase-like hydrolase
    2.2e-07   30.7   0.0     0.0014   18.2   0.0    2.2  2  S6PP          Sucrose-6F-phosphate phosphohydrolase
    2.2e-05   24.9   0.1       0.81    9.9   0.0    3.6  4  Hydrolase     haloacid dehalogenase-like hydrolase
     0.0023   18.3   0.3        5.2    7.4   0.0    3.1  3  HAD           haloacid dehalogenase-like hydrolase
  ------ inclusion threshold ------
       0.13   12.2   0.1          1    9.4   0.1    2.2  2  Ribosomal_L2  Ribosomal Proteins L2, RNA binding domain


Domain annotation for each model (and alignments):
>> Hydrolase_3  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.4   0.0   1.5e-49   5.3e-46       1     255 []      19     286 ..      19     286 .. 0.94

  Alignments for each domain:
  == domain 1  score: 157.4 bits;  conditional E-value: 1.5e-49
                  EEEEIIIIIS-TTS---HHHHHHHHHHHH..TTSEEEEE-SS-HHHHHHHHHHCCCC.SEEEEGGGTEEECTTTEEEEE--B-HHHHHHHHHHHHHTT CS
  Hydrolase_3   1 ialDlDGTLlnsdkkisektkeaikklke..kgikvviATGRslravlpvleelgld.lpvialNGaliddekgkilykstiskedvkeiikllkenn 95 
                  +++D+DGTLl+ +++ +e+t +a+ ++++   ++ +v+ATG + +av  +   lgld  p+  +NG++  +++gk+++++++++e v+e++++ k+n 
   EPX73765.1  19 VISDVDGTLLDAHHRFHERTYRAMSYIRQtrPDFPIVLATGKQRSAVDLIRIPLGLDaFPAAHVNGCIL-YNEGKVVSAEYLKPEVVMEVVDATKHNS 115
                  689*************************9888*************************889999******.*************************999 PP

                  .CEEEEEESSEEEESTT........THHHHHHHHHCHCTCEEEESHHHHHCHCSESEEEEES-HHHHHHHHHHHHHHCTTTEEEEEESTTEEEEEETT CS
  Hydrolase_3  96 .veillytedkvyvlnk.......eksekkkkeeektkkkkeeidseeeledeeiakililkdkekldelekelksklnklltitssskgyleimpkg 185
                   +  ++y+++kvy+l++        k+ +++ e+ +++ + e+ + +    + +++k+ +++d++kld +++ lk+  ++++t+t+   +++e++p +
   EPX73765.1 116 nIANVVYDDQKVYILTPgredmknVKRLEEIGEKVDWTLSCEDAKAKVLSGEIKVIKMAVCEDPDKLDVVRDILKPFPKDKFTTTQALAYCIELIPSS 213
                  9*****************99988777778888888899999999999999999********************************************* PP

                  -SHHHHHHHHHHHC..T--GGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEE--GGG.THHHHHH CS
  Hydrolase_3 186 vsKgtalkklakel..nisleeviafGDgeNDieMLeaaglgvAmgnaseevkkaAdyvtksnne.dGVakal 255
                  ++Kgtal+++  ++   i++e+viafGDg+ND++M+ +ag +vA++n+ + ++ +A+ v+   n+ ++V ++l
   EPX73765.1 214 CNKGTALQTITTKIlpHIKNENVIAFGDGQNDLTMFGVAGWSVAVKNGMQIAIDNARAVSRVGNDqGAVGEVL 286
                  **********9654349*********************************************99978887775 PP

>> S6PP  Sucrose-6F-phosphate phosphohydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.0   9.9e-05      0.36       3      49 ..      17      65 ..      15      73 .. 0.72
   2 !   18.2   0.0   3.9e-07    0.0014     157     211 ..     207     263 ..     185     279 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 9.9e-05
                EEEEE-TBTTTB.S-HHHHHHHHHHHH...GGGGGEEEEEE-SS-HHHH CS
        S6PP  3 lllvsdLDntlvdgdnealarlnelle..aeerkdvllvfaTGRsldsa 49
                ++++sd+D+tl+d  ++  +r ++ ++   + r+d+ +v+aTG++ +++
  EPX73765.1 17 QMVISDVDGTLLDAHHRFHERTYRAMSyiRQTRPDFPIVLATGKQRSAV 65
                589*********55544444443333335589***********986654 PP

  == domain 2  score: 18.2 bits;  conditional E-value: 3.9e-07
                 EEEEETT-SHHHHHHHHHHHH..T--GGGEEEEE-SGGGHHHHTSSSEEEE-TT--H CS
        S6PP 157 lDvlPkraskgeAlryLakkl..eleleqilvcGdsgnDeellignvlgVvVgnaqe 211
                 + ++P + +kg Al+ +  k   +++ e+++  Gd +nD  ++     +V V+n  +
  EPX73765.1 207 IELIPSSCNKGTALQTITTKIlpHIKNENVIAFGDGQNDLTMFGVAGWSVAVKNGMQ 263
                 6789***************9844677*****************99999*****9655 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.3   0.0     0.006        22       3      23 ..      18      38 ..      16      50 .. 0.76
   2 !    5.3   0.0    0.0059        21     134     175 ..      51     100 ..      40     122 .. 0.77
   3 ?    0.7   0.0      0.16   5.6e+02     116     181 ..      98     171 ..      88     184 .. 0.66
   4 !    9.9   0.0   0.00022      0.81     188     210 .]     231     253 ..     200     253 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.006
                EEEEESBTTTBCHHHHHHHHH CS
                xxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  3 tvvfDkdGTLttgepsvedvi 23
                 v+ D+dGTL++ +++ ++ +
  EPX73765.1 18 MVISDVDGTLLDAHHRFHERT 38
                6899*******9996666544 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.0059
                 TEEEEEEESSEHHHHHHHHHHTTGGGE.SEEEEHHCES.STTT......S CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxx.xxxx......x RF
   Hydrolase 134 gievvlltgdnpetaeraanqlGddyf.daviasdiet.vakp......s 175
                  +++vl+tg +++ ++ +   lG d+f +a+++++i    +k+      +
  EPX73765.1  51 DFPIVLATGKQRSAVDLIRIPLGLDAFpAAHVNGCILYnEGKVvsaeylK 100
                 5689********999988888**888889999999999877774444444 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.16
                 THHBHTTHH.HHHHHHHHT.TEE........EEEEESSEHHHHH.HHHHHTTGGGESEEEEHHCESSTTTSHHHHHH CS
                 xxxxxxxxx.xxxxxxxxx.xxx........xxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 116 plkvkpeaa.eavasLkaa.gie........vvlltgdnpetae.raanqlGddyfdaviasdietvakpspegkva 181
                    +kpe++ e+v + k + +i         v++lt + + + + + ++++G +++d +++ ++ + +  s e+kv 
  EPX73765.1  98 Y--LKPEVVmEVVDATKHNsNIAnvvyddqkVYILTPGREDMKNvKRLEEIG-EKVDWTLSCEDAKAKVLSGEIKVI 171
                 3..6666666666666655455335555555999998888888888888888.666666665555544447777765 PP

  == domain 4  score: 9.9 bits;  conditional E-value: 0.00022
                 STGGGEEEEESSHHHHHHHHHTT CS
                 xxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 188 gkpeevamVGDgvnDaaalaaAg 210
                 +k e+v+++GDg nD+ ++  Ag
  EPX73765.1 231 IKNENVIAFGDGQNDLTMFGVAG 253
                 78999************998776 PP

>> HAD  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.3     0.038   1.4e+02       1      12 [.      19      30 ..      19      38 .. 0.84
   2 !    5.5   0.1    0.0056        20      87     142 ..      35      86 ..      27     122 .. 0.70
   3 !    7.4   0.0    0.0015       5.2     168     187 ..     230     249 ..     160     250 .. 0.78

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.038
         HAD  1 alfDfDgTLldg 12
                +++D+DgTLld 
  EPX73765.1 19 VISDVDGTLLDA 30
                689*******96 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.0056
         HAD  87 dp...galellaahraaGdrvvvvSgglrplvepllaelgadevlatelevddrltgel 142
                 ++    a+ +++ + +  +++v+ +g  r  v  +   lg d++ a       +++g +
  EPX73765.1  35 HErtyRAMSYIR-QTRPDFPIVLATGKQRSAVDLIRIPLGLDAFPAA------HVNGCI 86 
                 333338999999.55******************99999996666555......555553 PP

  == domain 3  score: 7.4 bits;  conditional E-value: 0.0015
         HAD 168 gidleevvayGDspsDlpll 187
                 +i+ e+v+a+GD+ +Dl ++
  EPX73765.1 230 HIKNENVIAFGDGQNDLTMF 249
                 567788***********995 PP

>> Ribosomal_L2  Ribosomal Proteins L2, RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.29     1e+03      11      29 ..      31      48 ..      27      58 .. 0.72
   2 ?    9.4   0.1   0.00028         1      33      66 ..     100     132 ..      85     138 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.29
                  TT--------EE-B--S-.- CS
  Ribosomal_L2 11 rhrggGhkkkyrlidfkr.n 29
                  +hr    ++ yr++++ r +
    EPX73765.1 31 HHRFH--ERTYRAMSYIRqT 48
                  55544..999*****99944 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00028
                   --EEEEEEE--TT-SS-EEEEEETTTEEEEEE-- CS
  Ribosomal_L2  33 vkgkVveieyDpgRsApiAlvkyedgekryiiap 66 
                    +++V+e+      +++iA v+y d +k yi+ p
    EPX73765.1 100 KPEVVMEVVDATKHNSNIANVVYDD-QKVYILTP 132
                   5689999999999************.9*****97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (303 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       501  (0.0279436); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.64u 0.35s 00:00:00.99 Elapsed: 00:00:00.56
# Mc/sec: 1636.13
//
Query:       EPX73766.1  [L=655]
Description: transcription factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-20   73.8   6.1    2.4e-20   72.7   6.1    1.6  1  Fungal_trans  Fungal specific transcription factor domain
    7.9e-07   29.1   4.3    7.9e-07   29.1   4.3    1.8  2  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.7   6.1   2.7e-24   2.4e-20       2     244 ..     241     453 ..     240     475 .. 0.80

  Alignments for each domain:
  == domain 1  score: 72.7 bits;  conditional E-value: 2.7e-24
  Fungal_trans   2 drffsnfhpqfpilhkpsflpktssenssksayaspllllailalGalfsesetkesnssltsesqefiafplraeili.hedfsspssslwilqsL 97 
                   d++f+++hp +pilh p fl ++    ++ +++ +++ll+a ++l   +++++ + sn +  + + +       ++ +    +f    ++l ++q+ 
    EPX73766.1 241 DLYFTHIHPAYPILHGPRFLLSY----KNGARNVPSILLAALYSLSLIYWKKDPRLSNIPPLDQR-K------MWNLVEdGLNFHFTQPRLSTIQAA 326
                   89*********************....******************************98888855.2......56666664457777777*****77 PP

  Fungal_trans  98 lllelyektssdralherhhgvavrlarslgLhrnpsyvgkkslwklweeeaesrrRlwwaaFylDktialklGrppllddsqinlpLPcddddlwe 194
                   ll+      +s+ ++   +++ +  l++ lg++ +  +++       + ee+ +r+R+wwa+F+ Dk++++++G  +++++++  +p  ++ ++l  
    EPX73766.1 327 LLYL-IGRPLSNMYSLTSILSRTTVLSQLLGFNHDCTNWE------IPNEEKTIRKRIWWAIFIADKWYSMYFGLATNIHEDDYVVPKIDSNETL-- 414
                   6664.58889999999999999989***************......99999**************************99***9999855555422.. PP

  Fungal_trans 195 sddaseetlvetklsneeksrkiasfllaLkkilskiagsllsiekqlqq 244
                    ++ + +            s k ++ ++ L+ il++i+  l++i+  +++
    EPX73766.1 415 PLEITSSM-----------SFKTFLKMIELSMILQDILQDLFTIRALSKH 453
                   22222111...........2234566888888888888888877765555 PP

>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1   4.3   8.8e-11   7.9e-07       2      36 ..      21      56 ..      20      60 .. 0.92
   2 ?   -2.2   0.0      0.53   4.8e+03      27      36 ..     358     366 ..     356     369 .. 0.78

  Alignments for each domain:
  == domain 1  score: 29.1 bits;  conditional E-value: 8.8e-11
                S-HHHHHCT---ST...SSSS-HHHHHCTHHHCCCCTC CS
     Zn_clus  2 aCdnCrkkKvKCda...kkPaCsnCkklnleCtfyses 36
                +CdnCr +K++C     ++P C+ C +l + Ct y+ +
  EPX73766.1 21 PCDNCRLRKSRCVLevvGNP-CALCLTLKVACT-YHLP 56
                8************999****.************.8865 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.53
                 THHHCCCCTC CS
     Zn_clus  27 nleCtfyses 36 
                 n +Ct ++e 
  EPX73766.1 358 NHDCT-NWEI 366
                 789**.9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (655 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       504  (0.0281109); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.25s 00:00:00.89 Elapsed: 00:00:00.43
# Mc/sec: 4543.83
//
Query:       EPX73767.1  [L=291]
Description: methyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.8e-20   72.8   0.0    1.6e-19   70.4   0.0    2.1  2  Methyltransf_25  Methyltransferase domain
    4.6e-20   72.1   0.0    1.4e-19   70.6   0.0    1.8  2  Methyltransf_11  Methyltransferase domain
    7.6e-12   45.3   0.0    1.6e-11   44.2   0.0    1.5  1  Methyltransf_31  Methyltransferase domain
    7.8e-11   42.6   0.0    1.8e-10   41.4   0.0    1.7  1  Methyltransf_12  Methyltransferase domain
      2e-09   37.2   0.0    3.5e-09   36.4   0.0    1.3  1  Ubie_methyltran  ubiE/COQ5 methyltransferase family
    1.8e-08   34.4   0.0    2.5e-08   33.9   0.0    1.2  1  Methyltransf_23  Methyltransferase domain
    1.3e-06   28.1   0.0    2.2e-06   27.4   0.0    1.3  1  MTS              Methyltransferase small domain
    2.9e-06   26.6   0.0    4.4e-06   26.0   0.0    1.2  1  DREV             DREV methyltransferase
    1.4e-05   25.0   0.0    4.8e-05   23.3   0.0    1.8  2  Methyltransf_8   Hypothetical methyltransferase
    0.00081   18.1   0.0     0.0011   17.7   0.0    1.2  1  Methyltransf_29  Putative S-adenosyl-L-methionine-dependent m
     0.0047   16.0   0.0     0.0092   15.1   0.0    1.4  1  RrnaAD           Ribosomal RNA adenine dimethylase
     0.0056   16.0   0.0     0.0078   15.5   0.0    1.3  1  Methyltransf_2   O-methyltransferase domain
  ------ inclusion threshold ------
      0.028   14.4   0.0      0.049   13.6   0.0    1.3  1  Methyltransf_32  Methyltransferase domain
       0.17   11.5   0.0       0.49   10.0   0.0    1.7  2  MetW             Methionine biosynthesis protein MetW


Domain annotation for each model (and alignments):
>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.4   0.0   1.2e-22   1.6e-19       1      97 []      76     164 ..      76     164 .. 0.95
   2 ?   -0.6   0.0       1.7   2.2e+03      60      83 ..     226     250 ..     211     260 .. 0.70

  Alignments for each domain:
  == domain 1  score: 70.4 bits;  conditional E-value: 1.2e-22
                      EEEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTTTEEEEESBCCGBSSSTTTEEEEEEESTGGGSSHHHHHHHHHHHHHHEE CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeeglnvefvqgdaedlpfedgsfDlvvssgalhhlsdedlekalkeiarvLk 94 
                      +LdlG+GtG+l  ++ ++   +kv++vD se+ml+  ++++    + ve + g+a+++p++d+s+Dl+++ +++h++ +   +kalke++rvLk
       EPX73767.1  76 ILDLGAGTGKLYPRINAAH-PQKVMAVDSSEAMLKVLQKKY----PAVESHLGSATQIPLPDESVDLILCGNSFHWFAN---AKALKEMHRVLK 161
                      8***************996.6********************....99***********************666***984...68********** PP

                      EEE CS
  Methyltransf_25  95 pgG 97 
                      p+G
       EPX73767.1 162 PKG 164
                      *99 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 1.7
                      SSTTTEEEEEEEST.GGGSSHHHHH CS
  Methyltransf_25  60 fedgsfDlvvssga.lhhlsdedle 83 
                       +++s++ +v s + +h l++++ +
       EPX73767.1 226 TPENSIHRMVFSLSyMHALPEQEKA 250
                      5677777777777867778866643 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.6   0.0   1.1e-22   1.4e-19       1      94 [.      77     166 ..      77     168 .. 0.94
   2 ?   -2.3   0.0       5.6   7.1e+03      64      81 ..     234     251 ..     227     255 .. 0.80

  Alignments for each domain:
  == domain 1  score: 70.6 bits;  conditional E-value: 1.1e-22
                      EEET-TTSHHHHHHHHTT.SEEEEEES-HHHHHHHHHHCCHHT-EEEETTEECCCTSS-TT-EEEEEEES-CCC-CCHHHHHHHHHHHEEEEEE CS
  Methyltransf_11   1 LdvGcGtGrlaealakrg.arvvgvDlskemlklakekaseeglkvefvvadaeklpfednsfDlvvssevlhhvedpekalkeiaRvLkpgGl 93 
                      Ld+G+GtG+l   +  +   +v++vD s++mlk+ ++k++  +     + ++a+++p++d+s+Dl+++ +++h+++  +kalke++RvLkp G 
       EPX73767.1  77 LDLGAGTGKLYPRINAAHpQKVMAVDSSEAMLKVLQKKYPAVE----SHLGSATQIPLPDESVDLILCGNSFHWFA-NAKALKEMHRVLKPKGA 165
                      8**************7778****************99999866....59**************************5.89**************8 PP

                      E CS
  Methyltransf_11  94 l 94 
                      l
       EPX73767.1 166 L 166
                      7 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 5.6
                      EEEEES-CCC-CCHHHHH CS
  Methyltransf_11  64 lvvssevlhhvedpekal 81 
                      +v+s + +h ++++eka+
       EPX73767.1 234 MVFSLSYMHALPEQEKAV 251
                      688888999999998887 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.2   0.0   1.3e-14   1.6e-11       4     107 ..      73     166 ..      71     210 .. 0.88

  Alignments for each domain:
  == domain 1  score: 44.2 bits;  conditional E-value: 1.3e-14
  Methyltransf_31   4 glrvlDlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaqklgldnveFeqgdieeleklledekfDlilsnevlnaladpdkileei 97 
                      + ++lDlG+GtG+l  +++  +    +v+ +D se ++++ ++     ++  ve + g++++++  l de++Dlil+ + + +  +++k+l+e+
       EPX73767.1  73 ESTILDLGAGTGKLYPRIN--AAHPQKVMAVDSSEAMLKVLQK-----KYPAVESHLGSATQIP--LPDESVDLILCGNSF-HWFANAKALKEM 156
                      678***************9..444578*************999.....5999************..9**********9999.888899****** PP

  Methyltransf_31  98 ervlkpggil 107
                      +rvlkp+g+l
       EPX73767.1 157 HRVLKPKGAL 166
                      ********97 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.4   0.0   1.4e-13   1.8e-10       1      99 []      77     166 ..      77     166 .. 0.90

  Alignments for each domain:
  == domain 1  score: 41.4 bits;  conditional E-value: 1.4e-13
  Methyltransf_12   1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvelealdlldldggssfDlvvasnvlhhlkdirevldnirklLk 94 
                      L++G+GtG l  ++ ++ ++ ++ +vD s+++++  ++k  + e +  +  ++   d        s+Dl+++ n +h+++  +++l++++++Lk
       EPX73767.1  77 LDLGAGTGKLYPRINAA-HPQKVMAVDSSEAMLKVLQKKYPAVESHLGSATQIPLPDE-------SVDLILCGNSFHWFA-NAKALKEMHRVLK 161
                      8*************999.99*************9999999999988877777777763.......9************85.5689********* PP

  Methyltransf_12  95 pgGrl 99 
                      p G l
       EPX73767.1 162 PKGAL 166
                      *9965 PP

>> Ubie_methyltran  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.4   0.0   2.7e-12   3.5e-09      41     150 ..      66     167 ..      61     184 .. 0.88

  Alignments for each domain:
  == domain 1  score: 36.4 bits;  conditional E-value: 2.7e-12
                      HH--S--TTEEEEES-TT-HHHHHHHHHHHHHHEEEEEES-HHHHHHHHHHHHHHTSSTEEEEE--TTT-TTS-T-EEEEEEES-GGG-S-HHH CS
  Ubie_methyltran  41 klvavkrgakvlDvagGtgDlafklsdsvgekgkvvvlDinenmLkvgekklkeegkinieflqanaeeLpfeddsfDvvtvsfGlrnvtDklk 134
                      +  +v + +++lD+ +Gtg l  ++  +  +  kv+ +D +e mLkv +kk     +  +e   ++a ++p  d+s D++  +  +  +++  k
       EPX73767.1  66 DEFGVNEESTILDLGAGTGKLYPRINAA--HPQKVMAVDSSEAMLKVLQKK-----YPAVESHLGSATQIPLPDESVDLILCGNSFHWFAN-AK 151
                      556788999************9999654..55699***********99988.....45799999**********************99986.69 PP

                      HHHHHHHHEEEEEEEE CS
  Ubie_methyltran 135 aLkeayrvlkpGGrlv 150
                      aLke++rvlkp G+l 
       EPX73767.1 152 ALKEMHRVLKPKGALG 167
                      *************985 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   0.0   1.9e-11   2.5e-08      21     161 ..      71     212 ..      24     215 .. 0.81

  Alignments for each domain:
  == domain 1  score: 33.9 bits;  conditional E-value: 1.9e-11
  Methyltransf_23  21 raggrvLdiGcGtGillevl.rengfsvtgvDlspeaveiae.kakkaqkdqfdeqeaaepqgkfdlIvlrevlehvpdppellrqiatllkpg 112
                      ++ + +Ld+G+GtG l + + ++++ +v +vD s+++ + ++ k +  +++   + +++ p+++ dlI + ++++++ + +++l+ +++ lkp 
       EPX73767.1  71 NEESTILDLGAGTGKLYPRInAAHPQKVMAVDSSEAMLKVLQkKYPAVESHLGSATQIPLPDESVDLILCGNSFHWFAN-AKALKEMHRVLKPK 163
                      45669***********9999555566**********99998542223333333334555599*****************.9************* PP

  Methyltransf_23 113 Gylllseplaslkedrllldw.lylvpagrhisffsarslkelleeaGle 161
                      G l  +++++++k+ +++ ++ ++l++    + +f   ++++l+ + G++
       EPX73767.1 164 GAL-GLVWNVRDKSVSWVNKInELLDKYRSGSPYFGTWEWAQLFPGHGFQ 212
                      *88.7788999999999999767888886777999999999999999997 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   0.0   1.7e-09   2.2e-06      20     146 ..      61     177 ..      53     192 .. 0.82

  Alignments for each domain:
  == domain 1  score: 27.4 bits;  conditional E-value: 1.7e-09
                 HHHHHHHCHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTSTTS-EEEEEE---STTTCHCHHHHH CS
         MTS  20 sklLletlpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvleeveekkfdlivsNPPfhagkatelava 118
                 ++ L++ +  +++ ++lDlG+G+G l   + +++p+ +v +vd + + l++ ++ + a + +   + s     ++++++dli++   fh   +      
  EPX73767.1  61 TDWLVDEFGVNEESTILDLGAGTGKLYPRINAAHPQ-KVMAVDSSEAMLKVLQKKYPAVESH---LGSATQIPLPDESVDLILCGNSFHWFAN------ 149
                 567899999999999********************9.899******9999999988877754...334445577889************9887...... PP

                 HHHHHHHHHHEEEEEEEEEEEETTSCHH CS
         MTS 119 eeliaeAkeaLkegGeLliVanrklgye 146
                  + ++e +++Lk++G L +V+n   +  
  EPX73767.1 150 AKALKEMHRVLKPKGALGLVWNVRDKSV 177
                 566788899***********99765544 PP

>> DREV  DREV methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.0   3.4e-09   4.4e-06      94     183 ..      72     165 ..      64     187 .. 0.82

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 3.4e-09
        DREV  94 edkklldlGaGdGeitkrv.aptfeevyatelsetmrdrlkkkkynvlsalelqet.....dvkldlilclnlldrcfdplklledirsalepngr 183
                 e+ ++ldlGaG G++  r+ a + ++v a + se m + l+kk   v s l  + t     d   dlilc n +   f   k l++++ +l+p+g 
  EPX73767.1  72 EESTILDLGAGTGKLYPRInAAHPQKVMAVDSSEAMLKVLQKKYPAVESHLGSA-TqiplpDESVDLILCGNSFH-WFANAKALKEMHRVLKPKGA 165
                 6889***********98872567789***************9988887777644.3012227789*******996.6788999**********986 PP

>> Methyltransf_8  Hypothetical methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.0   3.8e-08   4.8e-05      72     161 ..      72     174 ..      27     190 .. 0.73
   2 ?   -1.3   0.0       1.2   1.6e+03     143     185 ..     246     288 ..     227     291 .] 0.69

  Alignments for each domain:
  == domain 1  score: 23.3 bits;  conditional E-value: 3.8e-08
                     TTS-EEEES-TT-HHH..HH--S-..EEEEE.....SS-SSTT...EEES-T...TS-S--TT-EEEEEEES---SS-HHHHHHHHHHHEEEEEE CS
  Methyltransf_8  72 dnlvvadlGcGeakia..eavrekekvrsfd.....lvavner...vvacdl...akvPledesvdvavfclslmgtnladflkeanrvlkvGGl 153
                     ++ ++ dlG G  k+    +  +++kv+++d     l+ ++++   v++  l   +++Pl desvd++++  s+     a+ lke++rvlk+ G 
      EPX73767.1  72 EESTILDLGAGTGKLYprINAAHPQKVMAVDsseamLKVLQKKypaVES-HLgsaTQIPLPDESVDLILCGNSFHWFANAKALKEMHRVLKPKGA 165
                     567899******9999333445667899988444443344444111332.2233389**********************************9887 PP

                     E.EEEEEGG CS
  Methyltransf_8 154 l.kvaevks 161
                     l  v +v+ 
      EPX73767.1 166 LgLVWNVRD 174
                     723455555 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 1.2
                     HHHHHEEEEEEEEEEEEGGG-S-HHHHHHHHHCTTEEEEEEE- CS
  Methyltransf_8 143 eanrvlkvGGllkvaevksrfesvklfaraltklGfevkskdl 185
                     e ++ +    l k+ae   r+++ ++++   + + f +++  l
      EPX73767.1 246 EQEKAVVRAELDKIAETVPRVQNTDQIKFPYHTMAFSIEKEAL 288
                     4444444556778999999999999988888888888877655 PP

>> Methyltransf_29  Putative S-adenosyl-L-methionine-dependent methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   8.3e-07    0.0011     148     214 ..     101     165 ..      14     188 .. 0.70

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 8.3e-07
  Methyltransf_29 148 kDeheaqvqfaLeRgvpailavlgt.krlpyPsrsfdlihCsrCridwteedgilllevdRvlRpgGy 214
                       D+ ea +++ L ++ pa+ + lg+ +++p P +s dli C     +w + +++ l e++Rvl+p+G 
       EPX73767.1 101 VDSSEAMLKV-LQKKYPAVESHLGSaTQIPLPDESVDLILCGNS-FHWFA-NAKALKEMHRVLKPKGA 165
                      4667776664.9999********97369*************985.78976.5789***********96 PP

>> RrnaAD  Ribosomal RNA adenine dimethylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   7.2e-06    0.0092      23      72 ..      65     115 ..      60     132 .. 0.90

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 7.2e-06
                 HHHH-GGTTSEEEEES-TTTCCHHHHHCC-.SEEEEE-S-HHHHHHHHCHT CS
      RrnaAD  23 ldklnleekltvleigpGkGilTeeLakra.kqvvvlElderLakllqkkl 72 
                 +d+  ++e+ t+l++g+G+G l  +++    ++v ++ + e+++k+lqkk 
  EPX73767.1  65 VDEFGVNEESTILDLGAGTGKLYPRINAAHpQKVMAVDSSEAMLKVLQKKY 115
                 7778899*******************99999******************75 PP

>> Methyltransf_2  O-methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   6.1e-06    0.0078      56     167 ..      66     171 ..      52     212 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 6.1e-06
                     HSS-GGG-SEEEEET-TTSHHHHHHHHH-TT-EEEEEE-HHHHHHHHHHS-----TTEEEEES-TTTS---..--SEEEEESSGGGS-HHHHHHH CS
  Methyltransf_2  56 eafdleglkslvDvGGGtGalakaivsayPtikvivfDlpeVveaAkehlsageeervefvgGdffkdslP..eaDaillkrvlhDwsdekcvkl 148
                      +f +++ ++++D+G GtG l   i +a+P+ kv+  D +e + +  ++    + + ve + G+  + +lP  + D+il  +  h ++++k    
      EPX73767.1  66 DEFGVNEESTILDLGAGTGKLYPRINAAHPQ-KVMAVDSSEAMLKVLQK----KYPAVESHLGSATQIPLPdeSVDLILCGNSFHWFANAK---A 152
                     5566677789********************8.89999998888777776....88****************87789999999999888876...5 PP

                     HHHHHHH--TT-EEEEEE- CS
  Methyltransf_2 149 LkrvkkalpagGkvivvea 167
                     Lk++++ l+++G++ +v  
      EPX73767.1 153 LKEMHRVLKPKGALGLVWN 171
                     7888888888888766655 PP

>> Methyltransf_32  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   3.9e-05     0.049      24      78 ..      71     122 ..      60     134 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 3.9e-05
  Methyltransf_32  24 sgaltvvDvGaGkgYLsfvlalkekeyklkvvgidakeelvekaekraeklgkkf 78 
                      +++ t++D+GaG g L  +++     ++ kv+++d++e++ +  +k   ++++++
       EPX73767.1  71 NEESTILDLGAGTGKLYPRINA---AHPQKVMAVDSSEAMLKVLQKKYPAVESHL 122
                      6789******************...999***********9999888777777665 PP

>> MetW  Methionine biosynthesis protein MetW
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   0.00038      0.49      11     101 ..      70     159 ..      62     163 .. 0.74
   2 ?   -2.1   0.0       1.9   2.4e+03     110     142 ..     195     228 ..     193     269 .. 0.54

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00038
        MetW  11 ikpgsrvldlGcGdGellellkeekqvdgrGleldeegvaecvakGlsviqgdldkdlen.fedksfdyvvlsqtlqatrnpkevldellri 101
                 ++++s++ldlG+G G+l   ++  +  +   ++ +e ++ ++++k    ++  l +  +   +d+s d+++   ++    n+k  l+e+ r+
  EPX73767.1  70 VNEESTILDLGAGTGKLYPRINAAHPQKVMAVDSSE-AMLKVLQKKYPAVESHLGSATQIpLPDESVDLILCGNSFHWFANAK-ALKEMHRV 159
                 7899*************9999887777777777655.5667778877777777776655437888888888777777666654.56777776 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.9
        MetW 110 PnfGhWrvrlsllskG.rmPvtdalPyeWydtpn 142
                 P fG W+    +  +G +  +t  +P+++  tp+
  EPX73767.1 195 PYFGTWEWAQLFPGHGfQKFRTCVFPFSYCTTPE 228
                 6677776543333333234456666777776664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (291 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       580  (0.0323498); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2135.05
//
Query:       EPX73768.1  [L=566]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-24   85.5   0.9    5.5e-24   84.4   0.2    1.9  2  DIL       DIL domain
  ------ inclusion threshold ------
       0.18   12.0   0.1        1.8    8.8   0.0    2.5  3  HMD       H2-forming N5,N10-methylene-tetrahydromethanopterin


Domain annotation for each model (and alignments):
>> DIL  DIL domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0      0.73   6.6e+03      51      70 ..     219     238 ..     199     269 .. 0.60
   2 !   84.4   0.2   6.2e-28   5.5e-24       1     103 [.     318     437 ..     318     438 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.73
                 ..-GGGGHHHHHHHHHHHC- CS
         DIL  51 eaaekhlapliqaaqllqlp 70 
                  +++++ ++li+ +  l+++
  EPX73768.1 219 GQIQQECNQLISEIYCLVCK 238
                 34444444444444444444 PP

  == domain 2  score: 84.4 bits;  conditional E-value: 6.2e-28
                 HHHHHHHHHHHHHHHHHHHHHS-SB-HHHHHHHHHHHHHHHHCCTS-..................-GGGGHHHHHHHHHHHC-S-.....-HHHHHHHC CS
         DIL   1 QlfsqlfyfinaelfNrlllrkklcsrskGlqlrrnlslledWaeeqgle.............eaaekhlapliqaaqllqlpks.....sledlesil 81 
                 Q+++ql+++++++lfNr+++ kk+ sr+ ++++r+n+s le+W +++ ++              +++ hl++l q++q+lq+  +     + e l+++l
  EPX73768.1 318 QCIEQLYRWLGVRLFNRVVSTKKYHSRAAAMEIRFNVSSLEEWSQTNSVKlrkpidypgedfrVSLTPHLTSLTQLLQWLQCLYRlseenEPEPLQETL 416
                 99*******************************************999967799*********99******************999888788888899* PP

                 .TT-TSS-HHHHHHHHTTB--T CS
         DIL  82 rstcpaLnsaQlkrllenYrpe 103
                  ++++aLn++Ql+ + ++Y+p+
  EPX73768.1 417 -ESLDALNPRQLYTVAKSYQPN 437
                 .*******************97 PP

>> HMD  H2-forming N5,N10-methylene-tetrahydromethanopterin dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.0   0.00021       1.8       8      75 ..     189     256 ..     182     264 .. 0.92
   2 ?   -3.2   0.0       1.2     1e+04      48      80 ..     317     349 ..     295     358 .. 0.55
   3 ?   -0.6   0.0      0.18   1.6e+03      64      89 ..     419     444 ..     392     452 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00021
                 HSTTHHHHHHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-HHHHHHC CS
         HMD   8 aDmgslvTAvtlagildyydvvtkilkapkemvekqilesLqtiaslveksGieglekalnpelllks 75 
                  Dm   v   + + +l++y      l+  ++ +++  ++ ++ i  lv k  i+ +e++l+ ++l+ +
  EPX73768.1 189 EDMVLCVMWLANVCLLEFYLQRDTRLEELTGQIQQECNQLISEIYCLVCKDAIRRMEENLEEGMLKYT 256
                 589999999999999****999999*************************************999765 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.2
                 HHHHHHHHHHHHHHHHHHCC-HHHHHHCHHCC- CS
         HMD  48 LqtiaslveksGieglekalnpelllksaksmn 80 
                 +q i +l +  G++ +  ++  +   + a +m 
  EPX73768.1 317 IQCIEQLYRWLGVRLFNRVVSTKKYHSRAAAME 349
                 455555555555555555555555555555554 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.18
                 HHCC-HHHHHHCHHCC-SCCCTCHHH CS
         HMD  64 ekalnpelllksaksmnlgeeqeeLp 89 
                 ++alnp  l + aks + + ++++++
  EPX73768.1 419 LDALNPRQLYTVAKSYQPNSSETKVS 444
                 57899999999999988777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (566 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       581  (0.0324056); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.22s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 4373.45
//
Query:       EPX73769.1  [L=107]
Description: hypoxia induced family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      4e-15   55.8   0.1    5.2e-15   55.4   0.1    1.2  1  HIG_1_N   Hypoxia induced protein conserved region


Domain annotation for each model (and alignments):
>> HIG_1_N  Hypoxia induced protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.4   0.1   2.9e-19   5.2e-15       2      52 .]      41      91 ..      40      91 .. 0.97

  Alignments for each domain:
  == domain 1  score: 55.4 bits;  conditional E-value: 2.9e-19
     HIG_1_N  2 eplvpiGilatvgalvrglrsmkrgdskqsnrlmraRiaaQaftvlalvaG 52
                +pl+p+G+++tvg  +   ++++rg+  ++nr+m++R++ Q+ft++a+  G
  EPX73769.1 41 NPLIPLGCVMTVGTFLASGYHLRRGNELKANRFMKYRVLSQGFTLAAVAFG 91
                8***********************************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       442  (0.0246528); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.25s 00:00:00.59 Elapsed: 00:00:00.37
# Mc/sec: 860.06
//
Query:       EPX73770.1  [L=470]
Description: serine-tRNA ligase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.5e-21   76.0   0.0    6.2e-21   75.2   0.0    1.4  1  tRNA-synt_2b  tRNA synthetase class II core domain (G, H, P, 
      4e-13   49.5   2.3    7.5e-13   48.7   2.3    1.5  1  Seryl_tRNA_N  Seryl-tRNA synthetase N-terminal domain
  ------ inclusion threshold ------
      0.046   13.9   0.2       0.18   12.0   0.1    2.1  1  Cnl2_NKP2     Cnl2/NKP2 family protein
       0.25   11.7   3.4       0.52   10.7   3.4    1.4  1  Muted         Organelle biogenesis, Muted-like protein


Domain annotation for each model (and alignments):
>> tRNA-synt_2b  tRNA synthetase class II core domain (G, H, P, S and T)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.2   0.0   1.4e-24   6.2e-21      10     179 .]     266     438 ..     254     438 .. 0.88

  Alignments for each domain:
  == domain 1  score: 75.2 bits;  conditional E-value: 1.4e-24
                   EEEE-SSSHHHHHHHHHHHEE...EBGGSSEEEEEEEEEEBTTTS....TBCTTTB-SEEEEEEEEEEESGGGHHHHHHHHHHHHHHHHHHTT.SCE CS
                   xxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2b  10 eyiLkPtneetfvelirdevl...rskrLPlklyqiqtkyRdEks....dsrGLlRvreFhqkdgyvfhaeaslddslrdlikaisriferlglefr 99 
                   + +L+ t+e  +++l+ +++    ++k    +++ +++ yR+E+     d++GL R++eF++ + +   +++++  +++d++k+  ++ ++lgl+ r
    EPX73770.1 266 KQCLIGTAEISLASLGYKQTFhdlKEK----RVVGVSRSYRREAGargrDTKGLYRLHEFTKVELFAWTHPSQSSRVFEDIVKLQTDFAQSLGLSAR 358
                   468888999999999998876443555....9************66799**********************************************99 PP

                   EEEEEGTTSCBTTSEEEEEEEEETTTSEEEEEEEEEEEETHHHHHTTEEEECTTSSEEEEEEEEEE.EEHHHHHHHHHHHH CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxx RF
  tRNA-synt_2b 100 aiielmsaksadykdkkefeavsesltkgieigtiqklgtrlserlgatvldennreksvimicaa.igveRllsaileqn 179
                   ++   +++  a +++k+++ea+++s   ++ei++ +++ +++s+rl +++ ++ n   +v++++ +  ++ Rl+ a+le++
    EPX73770.1 359 VLNMPTQELGAPAAQKYDIEAWMPSRANFGEISSTSNCLDYQSRRLLTRY-KNPNDTGFVHTLNGTaAAIPRLIIALLENH 438
                   7777799999****************************************.5566788999*9999677*********986 PP

>> Seryl_tRNA_N  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.7   2.3   1.7e-16   7.5e-13       1     106 [.      37     143 ..      37     145 .. 0.98

  Alignments for each domain:
  == domain 1  score: 48.7 bits;  conditional E-value: 1.7e-16
                   ---HHHHHH-HHHHHHHHCCCT..CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCTTS-TCCCCCCCHHHHHHHHHHHHHHHHHHH CS
  Seryl_tRNA_N   1 MLDiklirenpeavkeklkkRg..edkadvdelleldekrrelqveleelqaerNelskeIgkakkkkedaeeliaevkelkeelkaleaelkelea 95 
                   ML+ik++ e+  ++++++  R+  + ++++ ++  l+e+   ++++l    +e+N+++k+I++ k+ +  +++l+ e+k++k+e++ +e+  +++++
    EPX73770.1  37 MLNIKYVYEHAGEIHQNCIDRNmhKVAETLPKIKNLYEELNIVRNRLAPQVREKNRITKSIKSSKDMQ-HRNSLVTEAKNIKTEIDSTEKIASDIQK 132
                   **********************99999**************************************986.99************************** PP

                   HHHHHHCTS-- CS
  Seryl_tRNA_N  96 eleklllaiPN 106
                   +l +++l++PN
    EPX73770.1 133 KLYHYCLSLPN 143
                   *********** PP

>> Cnl2_NKP2  Cnl2/NKP2 family protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   3.9e-05      0.18      32      58 ..      63      89 ..      30      97 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 3.9e-05
   Cnl2_NKP2 32 krssPqikrLYrdLqrqrsavldkVra 58
                 ++ P+ik+LY++L   r++   +Vr+
  EPX73770.1 63 AETLPKIKNLYEELNIVRNRLAPQVRE 89
                4556*******************9997 PP

>> Muted  Organelle biogenesis, Muted-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   3.4   0.00012      0.52      42     129 ..      41     125 ..      33     138 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00012
       Muted  42 enikklvnelkeqllpkclesmkenLselnkkleaalekverllqkeleeekrkseqlqekeeerkaeweeflkelqekkeevDeefe 129
                 + + +++ e++++ +++++++++e+L ++++  e+++   +rl  +  e++ r ++ +++   +  ++ +++++e ++ k e+D + +
  EPX73770.1  41 KYVYEHAGEIHQNCIDRNMHKVAETLPKIKNLYEELNIVRNRLAPQVREKN-RITKSIKS--SKDMQHRNSLVTEAKNIKTEIDSTEK 125
                 556678888899999999999999998888888888888888887744444.35555554..45556777888999999999997644 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (470 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       933  (0.0520386); expected 358.6 (0.02)
Passed bias filter:                      572  (0.0319036); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.29s 00:00:00.85 Elapsed: 00:00:00.47
# Mc/sec: 3018.07
//
Query:       EPX73771.1  [L=447]
Description: tRNA-pseudouridine synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.5e-33  113.2   0.0    6.3e-29  100.6   0.0    2.5  2  PseudoU_synth_1  tRNA pseudouridine synthase
  ------ inclusion threshold ------
       0.08   12.6   0.0       0.23   11.1   0.0    1.8  1  VD10_N           Viral D10 N-terminal


Domain annotation for each model (and alignments):
>> PseudoU_synth_1  tRNA pseudouridine synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.0   7.4e-05      0.66      45      90 ..     131     177 ..      31     194 .. 0.78
   2 !  100.6   0.0     7e-33   6.3e-29       1     108 []     221     330 ..     221     330 .. 0.97

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 7.4e-05
  PseudoU_synth_1  45 vvtvkgsgFldhqVRamvgvl.favgqgklspedvkellnakkrkki 90 
                      + +++  g++d++V am++v+ + v   ++ p   +++ln  ++ +i
       EPX73771.1 131 TCNFSRCGRTDKGVSAMGQVIsLNVRHSERRPIVYCDVLNRILPPDI 177
                      67777789*************9******************9988774 PP

  == domain 2  score: 100.6 bits;  conditional E-value: 7e-33
  PseudoU_synth_1   1 AakelvGthdfgsfckqkqek..kntvrtileaaieevsgeekellvvtvkgsgFldhqVRamvgvlfavgqgklspedvkellnakk.rkkia 91 
                      Aa  ++G+hdf++fck++++k  +n+ r+il+ +i  ++    el+ ++++g +Fl+hqVR+mv++lf+vgq  ++ ++v++ll+++k ++k+ 
       EPX73771.1 221 AAALYLGEHDFRNFCKIDASKqiTNYNRRILSSKIICIDPA-TELYAFDLQGTAFLWHQVRCMVAILFLVGQHLEPISIVSDLLDTQKvPNKPI 313
                      8999********************************66665.89************************************************** PP

  PseudoU_synth_1  92 vetapavglvlfhvrYd 108
                      +  a++ +l+l+++ +d
       EPX73771.1 314 YDLASEFPLILYDCMFD 330
                      **************998 PP

>> VD10_N  Viral D10 N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   2.6e-05      0.23      10      28 ..     242     261 ..     234     280 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 2.6e-05
      VD10_N  10 yitknNrk.LsktyifsDda 28 
                 +it++Nr+ Ls+ +i++D+a
  EPX73771.1 242 QITNYNRRiLSSKIICIDPA 261
                 8*******99********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (447 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       656  (0.0365888); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 3221.17
//
Query:       EPX73772.1  [L=382]
Description: splicing suppressor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.6e-19   68.6   0.8      9e-19   67.3   0.8    1.7  1  zf-Mss51  Zinc-finger of mitochondrial splicing suppressor 51
  ------ inclusion threshold ------
       0.09   12.2   0.1       0.13   11.7   0.1    1.2  1  START     START domain
       0.15   11.9   0.2       0.37   10.6   0.2    1.7  1  YL1_C     YL1 nuclear protein C-terminal domain


Domain annotation for each model (and alignments):
>> zf-Mss51  Zinc-finger of mitochondrial splicing suppressor 51
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.3   0.8   1.5e-22     9e-19       1      57 []      48      97 ..      44      97 .. 0.97

  Alignments for each domain:
  == domain 1  score: 67.3 bits;  conditional E-value: 1.5e-22
    zf-Mss51  1 lCPvpkhkqtapkhvdfeCpdCGiptycseehwedDyeahleicdtLrqvnedeHDL 57
                +CPv+       k+v+++Cp++G+p +cs++hwe+D++ h+ ++ +Lrq+ned HDL
  EPX73772.1 48 KCPVS------GKPVSYDCPESGFPSHCSKAHWEQDET-HQALIPKLRQINEDFHDL 97
                59999......8**************************.*****************9 PP

>> START  START domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   2.2e-05      0.13      11      64 ..     302     364 ..     292     370 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 2.2e-05
                 HHHHHHC-TT-EEEE...E.CCTTEEEEEEESSS-.......SCEEEEEEEECCSCHHHHHHHH CS
       START  11 lkkatseeegWvllv...dsengdevlqkveeskv.......ksgealraigvvdmvaallvee 64 
                  +++  ++++Wv+++   + +  +  lq v ++ +       ++++a+ra++v d+++++++ +
  EPX73772.1 302 HDLISTKCAVWVTSPssaQTKRDMSMLQDVLKDSFetllspqQNVFASRAWTVNDDNLHNVY-H 364
                 56778899*******9988888888999999998899**********************554.4 PP

>> YL1_C  YL1 nuclear protein C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.2   6.2e-05      0.37       2      19 ..      49      66 ..      48      66 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 6.2e-05
       YL1_C  2 CdITGlpAkYrDPkTgLp 19
                C+++G+p  Y +P +g p
  EPX73772.1 49 CPVSGKPVSYDCPESGFP 66
                **************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       377  (0.0210274); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 2436.40
//
Query:       EPX73773.1  [L=513]
Description: phosphatidylserine decarboxylase Psd2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.6e-65  219.7   0.0    4.1e-65  219.1   0.0    1.3  1  PS_Dcarbxylase  Phosphatidylserine decarboxylase


Domain annotation for each model (and alignments):
>> PS_Dcarbxylase  Phosphatidylserine decarboxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  219.1   0.0   2.3e-69   4.1e-65       1     197 [.     135     512 ..     135     513 .] 0.99

  Alignments for each domain:
  == domain 1  score: 219.1 bits;  conditional E-value: 2.3e-69
  PS_Dcarbxylase   1 lneffvrklkdgaRpidddpgaivsPaDgrilqigeieegsviqvKgityslrdLlgeasess................................ 63 
                     +++ff+r+l+++aRp+d+d++ +vsP+Dgri+  g ++++ +  vKg +ysl++Llg+ s+ +                                
      EPX73773.1 135 FQDFFCRELRPEARPVDPDSS-VVSPVDGRIVCQGVVDNNYIQHVKGLSYSLEALLGGVSTVDpaivdfgqdvttnlvkkhnefaskysippsyd 228
                     89**************88876.************************************988779******************************* PP

  PS_Dcarbxylase  64 ............................................................................................... 63 
                                                                                                                    
      EPX73773.1 229 gcshfprngngssardplaycdmqsqngncnqansvyapyydnccpfyafqdmtsdtnsdasdmstdsyytsvmegesdsdldnpvsethpmldd 323
                     *********************************************************************************************** PP

  PS_Dcarbxylase  64 ........................adsfkngyfvviyLspgdyHryhaPvsgkveerrhipGellsvnpsalkelrglftlneRvvlvie.wkGk 133
                                              ++++ + + viyL+pgdyHr+h+P+++++e+rrh+ Gel+sv+p+ +++l++lf+lneRv+l+++ ++G+
      EPX73773.1 324 gmpnwdvwvqeadvvdidslpwrnIQPNNLLFYSVIYLAPGDYHRFHSPADWVIESRRHFSGELFSVSPFLARRLHNLFVLNERVALLGRyKHGF 418
                     ************************99****************************************************************879** PP

  PS_Dcarbxylase 134 vavvpvGatnvgsivln..............................vlkgdelkkGeelGyFqfGStvvlvfeagkfieslvekgqkvkmGek 197
                     ++++pvGatnvgsiv++                              vl+g ++++Ge+lG Fq+GStvvlvfea+ +++++ ++gq v++Ge 
      EPX73773.1 419 MSMIPVGATNVGSIVIDcdptlstnrmvlrkkslgsfqevaysdaspVLNGVPINRGEQLGRFQLGSTVVLVFEAPADFKFSTHQGQYVRVGEG 512
                     ***********************************************99***************************99**************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (513 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       439  (0.0244855); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.34s 00:00:00.98 Elapsed: 00:00:00.55
# Mc/sec: 2830.98
//
Query:       EPX73774.1  [L=268]
Description: Clr6 histone deacetylase complex subunit Sds3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.8e-13   50.0  17.3    6.2e-13   49.3  16.4    1.7  1  Sds3            Sds3-like
  ------ inclusion threshold ------
      0.036   13.7   0.3      0.076   12.7   0.3    1.6  1  DUF1987         Domain of unknown function (DUF1987)
      0.053   12.3   7.5      0.084   11.6   7.5    1.3  1  AAA_32          AAA domain
      0.053   12.9   0.0      0.053   12.9   0.0    2.0  2  RE_CfrBI        CfrBI restriction endonuclease
      0.079   11.9   2.2       0.87    8.4   0.5    2.2  2  Not1            CCR4-Not complex component, Not1
       0.44    9.1   4.2       0.67    8.5   4.2    1.2  1  FapA            Flagellar Assembly Protein A
       0.85   10.1   8.4       0.11   13.0   3.7    2.0  2  AAA_17          AAA domain
        1.4    7.9   4.0        1.9    7.5   4.0    1.2  1  BPL_N           Biotin-protein ligase, N terminal


Domain annotation for each model (and alignments):
>> Sds3  Sds3-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.3  16.4   2.8e-16   6.2e-13      20     217 ..      28     258 ..      26     259 .. 0.68

  Alignments for each domain:
  == domain 1  score: 49.3 bits;  conditional E-value: 2.8e-16
        Sds3  20 YrerLteLqteltllqqGthpellrklrdleeerDaeLkrlrlreeyqlkriekefkadiekakqeheklvkllkeklyeelekkikrLkeeklllDla 118
                 ++ + +eLq+el  + +Gt + ll+ +++l+e++++eL   ++++++ ++r ++e++a+++ ak+e+++ ++ l++  +++l +k++++ e k   D+a
  EPX73774.1  28 FEAKKQELQAELGAIRDGTCKTLLDLFQELQEKKEEELDIEEQWRRHLMERAKEEYEAELKDAKEEYDQRCNSLQTMVLSHLAEKKRHILEAKDMFDIA 126
                 566779********************************************************************************************* PP

        Sds3 119 nansl......................kktrshta......g..............lanesatste..pvelltdrrslrtnsdsdflqelsdleeLqa 173
                 n++s                       +      +      +              +      +++  +    t r+s++  + s+   els  + L +
  EPX73774.1 127 NESSSllfhdassqfidrrklrhrrnaS------SnnstsnQlptlnffddyllfpT----EETSAipESIKKTVRNSVNSAKPSNV--ELSLFSPLLT 213
                 *999877666666666655554432220......11112221222333333422221....11111211222333444443333333..4444334444 PP

        Sds3 174 llfggepgkenkekkkrkastrestksapg.lqslkeeevneDla 217
                 +   +  ++++ + +  +  +r+ +k+  + l +++ee+++ D++
  EPX73774.1 214 MANVNLSSNRDRDFRAMERAERDREKAIDKsLVGATEEDIKSDMQ 258
                 333333334445555555666666888776799*******99987 PP

>> DUF1987  Domain of unknown function (DUF1987)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.3   3.4e-05     0.076      51     110 ..      31      90 ..      16     101 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 3.4e-05
     DUF1987  51 kkievnlkLsYfntssskalldllelLeeaaekgkkvevnWyydeededmlelgeefked 110
                 kk e++ +L  +   + k+lldl++ L+e +e++ ++e +W  +  +   +e+  e+k+ 
  EPX73774.1  31 KKQELQAELGAIRDGTCKTLLDLFQELQEKKEEELDIEEQWRRHLMERAKEEYEAELKDA 90 
                 66778888888899999*************************999999999988888875 PP

>> AAA_32  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   7.5   3.7e-05     0.084     163     267 ..      22     134 ..      10     165 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 3.7e-05
      AAA_32 163 plseeefealpeeerkeleekseeleeeleeilrelrelekeakeklkelerevakeaveplleelkekykdlek........vleyLeaveedilenl 253
                 pl+++efea ++e ++el +  +   + l ++++el+e ++e  +  ++++r+++++a e++ +elk+  +++++        vl++L + +++ile  
  EPX73774.1  22 PLTASEFEAKKQELQAELGAIRDGTCKTLLDLFQELQEKKEEELDIEEQWRRHLMERAKEEYEAELKDAKEEYDQrcnslqtmVLSHLAEKKRHILEAK 120
                 7899***********************************99999888999998888887777666666555554444466666**************** PP

      AAA_32 254 elfleeeeeeeeee 267
                 ++f  ++e+++  +
  EPX73774.1 121 DMFDIANESSSLLF 134
                 *9998888876555 PP

>> RE_CfrBI  CfrBI restriction endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.5      0.64   1.4e+03     101     122 ..      47      68 ..      41      87 .. 0.76
   2 ?   12.9   0.0   2.4e-05     0.053     148     220 ..     186     260 ..     166     263 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.64
    RE_CfrBI 101 ikeLssLleelkedatDelqis 122
                  k+L  L++el+e+ ++el+i 
  EPX73774.1  47 CKTLLDLFQELQEKKEEELDIE 68 
                 5778888889988888888664 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 2.4e-05
    RE_CfrBI 148 akkltirGgawsevGkkvekvLlkkllkllgvpeeknilsdlk..rdkelvkeRevDakvletkreairvelkLl 220
                 + k t+r +  s     ve +L   ll++++v    n + d++     e ++e+ +D  ++   +e i+ +++Ll
  EPX73774.1 186 SIKKTVRNSVNSAKPSNVELSLFSPLLTMANVNLSSNRDRDFRamERAERDREKAIDKSLVGATEEDIKSDMQLL 260
                 7899***************************9999999999984345566666669************9999998 PP

>> Not1  CCR4-Not complex component, Not1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.5   0.00039      0.87     293     322 ..      48      78 ..      46      81 .. 0.90
   2 ?    2.9   0.1     0.019        43     122     189 ..     181     246 ..     167     267 .. 0.66

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00039
        Not1 293 kvllelFsekesdseek.eiqeqItrvLlER 322
                 k+ll+lF+e ++++ee+ +i eq  r L+ER
  EPX73774.1  48 KTLLDLFQELQEKKEEElDIEEQWRRHLMER 78 
                 689******998888888************9 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.019
        Not1 122 daippsciq.LrNlilsAfPkkmklpdpftpglkvdrleeikeaPkilsdvteaLeeaglkkevdeylk 189
                 +aip+s+ +  rN + sA P++++l   f+p l + +++  ++  + +  +++a    + +k++d+ l 
  EPX73774.1 181 SAIPESIKKtVRNSVNSAKPSNVELS-LFSPLLTMANVNLSSNRDRDFRAMERAE--RDREKAIDKSLV 246
                 567777765379********999985.7777777777766666655555555443..444555555555 PP

>> FapA  Flagellar Assembly Protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   4.2    0.0003      0.67     334     412 ..      27     110 ..      18     133 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0003
        FapA 334 elkeklkeleeeleel.eeeleklkkkikklpklkaekqlesekkeqlkklletkeklkeeleeleeelkelkeelesk.....k 412
                 e+ +k +el+ el ++    +++l + +++l++ k+e++l+ e +   + ++++ke+++ el++ +ee+++  ++l+++     +
  EPX73774.1  27 EFEAKKQELQAELGAIrDGTCKTLLDLFQELQE-KKEEELDIEEQWRRHLMERAKEEYEAELKDAKEEYDQRCNSLQTMvlshlA 110
                 556666788888888844455566666999999.8899999999999************************99999998444431 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   3.7   4.7e-05      0.11      35     132 ..      61     158 ..      29     162 .. 0.80
   2 ?   -1.8   0.2       1.7   3.7e+03      44      62 ..     228     246 ..     212     265 .. 0.53

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 4.7e-05
                 HTTTS...HSSHHHHCTSHHHHHHHHHHHHHHHHHHHHHSSEEEEEE-SEEEETTEEEESSHHHHHHHH..SEEEEEE--HHHHHHHHHHHTTST-TS- CS
      AAA_17  35 krggl...akardemrklpleekkelqkeaaekiaeeakkkgvlvdghprikeqagfldglpkevleelkpdaiilleadpeeilerrlkdrtrgrddd 130
                 k+++l   ++ r ++++  +ee ++ +k a+e+  +++++ + +v  h    +++ +l+   k++++ ++ +  +l+++   + ++rr+ ++ r+ +  
  EPX73774.1  61 KEEELdieEQWRRHLMERAKEEYEAELKDAKEEYDQRCNSLQTMVLSHLAE-KKRHILE--AKDMFDIANESSSLLFHDASSQFIDRRKLRHRRNASSN 156
                 3334432344567777888888899999999999*9999999999999975.5566676..4789*************************999988777 PP

                 SH CS
      AAA_17 131 ne 132
                 n 
  EPX73774.1 157 NS 158
                 65 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 1.7
                 HHHCTSHHHHHHHHHHHHH CS
      AAA_17  44 demrklpleekkelqkeaa 62 
                  +m++++ +++k+++k + 
  EPX73774.1 228 RAMERAERDREKAIDKSLV 246
                 3444444444444444443 PP

>> BPL_N  Biotin-protein ligase, N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   4.0   0.00086       1.9     236     355 ..      58     178 ..      46     210 .. 0.66

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.00086
       BPL_N 236 ykkvveeleadekaRleflkalLtklgLevn..eeeeetevpslsplllsslskeeveelleslkeklaaekeeeeevikdendtfrlekedeeeaeea 332
                 ++k  eel+ +e+ R+++++   ++ + e++  +ee +++  sl++++ls+l +++  ++le+  +   + +e+++ +++d + +f   ++ +++ +++
  EPX73774.1  58 QEKKEEELDIEEQWRRHLMERAKEEYEAELKdaKEEYDQRCNSLQTMVLSHLAEKKR-HILEAK-DMFDIANESSSLLFHDASSQFIDRRKLRHRRNAS 154
                 4567899*************9999655555511566779999*********999984.465554.4466665667788888888886655554444333 PP

       BPL_N 333 aeeeeee.kedleevvkeilvvke 355
                 +++++++   +l+    ++l+++e
  EPX73774.1 155 SNNSTSNqLPTLNFFDDYLLFPTE 178
                 333333312334444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (268 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1940  (0.108205); expected 358.6 (0.02)
Passed bias filter:                      607  (0.0338558); expected 358.6 (0.02)
Passed Vit filter:                        74  (0.00412739); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.53u 0.28s 00:00:00.81 Elapsed: 00:00:00.44
# Mc/sec: 1813.05
//
Query:       EPX73775.1  [L=168]
Description: cytochrome P450 regulator Dap1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.6e-12   45.6   0.0    7.3e-12   45.3   0.0    1.2  1  Cyt-b5          Cytochrome b5-like Heme/Steroid binding domai
  ------ inclusion threshold ------
      0.023   14.5   0.4      0.033   14.0   0.4    1.2  1  VEFS-Box        VEFS-Box of polycomb protein
      0.082   12.4   0.2       0.12   11.8   0.2    1.2  1  Ribonuc_red_sm  Ribonucleotide reductase, small chain


Domain annotation for each model (and alignments):
>> Cyt-b5  Cytochrome b5-like Heme/Steroid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.3   0.0   1.2e-15   7.3e-12       4      73 ..      47     144 ..      44     145 .. 0.80

  Alignments for each domain:
  == domain 1  score: 45.3 bits;  conditional E-value: 1.2e-15
                 HHTTTE..CTTEEEEEETTEEEECTTTCCCSTTCSHHHHTTTTSBBHHHHHHTTGGCHHH..............................HHHHHGGEE CS
      Cyt-b5   4 elskhn..gkndlwvairgkVYDvskflskhpGgesailkyaGkDateafksvvhsekda..............................ekllkkylv 70 
                 el+++n    + +++ai+g+VY+v+ + +++ G++++++++ G+Dat+ +++ +++++ +                              +k+   ++v
  EPX73775.1  47 ELQEFNgiHRSLVFLAIKGTVYNVTMGSKFY-GPKGPYSAFGGRDATRGLAKSSFDDEFIpnaeaddlddwsdlnddekqtlddwkaffdQKY---PAV 141
                 8999995445599******************.**********************988866777777777777777777777777655555555...777 PP

                 EEE CS
      Cyt-b5  71 Gkl 73 
                 G+l
  EPX73775.1 142 GRL 144
                 776 PP

>> VEFS-Box  VEFS-Box of polycomb protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.4   5.6e-06     0.033      44      81 ..     100     137 ..      96     146 .. 0.91

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 5.6e-06
    VEFS-Box  44 vDdealrlkerqmldeftDvnegekelmklWnlfvkkq 81 
                  Dde++  +e+  ld+ +D n++ek+ +  W++f +++
  EPX73775.1 100 FDDEFIPNAEADDLDDWSDLNDDEKQTLDDWKAFFDQK 137
                 59999999**************************8765 PP

>> Ribonuc_red_sm  Ribonucleotide reductase, small chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.2     2e-05      0.12      33      66 ..     111     143 ..     108     161 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2e-05
                     HHHHHHHSTS-HHHHHHHHHHHHHHHHHHHHHHH CS
  Ribonuc_red_sm  33 kDlkdwkekLsedekefikkvlaflalldtivne 66 
                     +Dl+dw++ L++dek++++   af+ +    v+ 
      EPX73775.1 111 DDLDDWSD-LNDDEKQTLDDWKAFFDQKYPAVGR 143
                     8*****95.**************99876555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       735  (0.040995); expected 358.6 (0.02)
Passed bias filter:                      600  (0.0334653); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1185.46
//
Query:       EPX73776.1  [L=235]
Description: inositol phoshorylceramide synthase regulatory subunit Kei1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.8e-34  117.2  19.1    1.4e-28  100.0  12.5    2.1  2  Kei1      Inositolphosphorylceramide synthase subunit Kei1


Domain annotation for each model (and alignments):
>> Kei1  Inositolphosphorylceramide synthase subunit Kei1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.0  12.5     8e-33   1.4e-28       1     109 [.      21     129 ..      21     139 .. 0.94
   2 !   23.1   0.3     3e-09   5.4e-05     138     187 ..     129     178 ..     122     181 .. 0.82

  Alignments for each domain:
  == domain 1  score: 100.0 bits;  conditional E-value: 8e-33
        Kei1   1 sflgilsLqtGaelilllallNKvaGlYGlLalltGaplsflqlsmylySllvlvllalllphirkesplkilllavlYllDtvistaytvlFavdWfl 99 
                 sf+g++sL++G+e+i+++al+NK++GlYG+++++++  +s++q++my+ S+++lvl+ +l+ +i k s  ++l+l + Y++D ++++++tvlFa++Wf 
  EPX73776.1  21 SFFGLCSLRVGCEVIVWFALINKLSGLYGIVSIFQSSAVSAWQIFMYMTSIFTLVLFSWLAVYIPKDSVPHALILFYSYAIDFFLNVVFTVLFALSWFA 119
                 8*************************************************************************************************9 PP

        Kei1 100 vleehdaaaa 109
                 ++ +++++a+
  EPX73776.1 120 KVLTSSQSAQ 129
                 9877766654 PP

  == domain 2  score: 23.1 bits;  conditional E-value: 3e-09
        Kei1 138 sasvsaatssslasavlqqEsaasiiiivllllvriYfalvllsyarqll 187
                 +   ++++ +sl   +++ Es+ s++++++++ +++Yf+l+ lsy+++l+
  EPX73776.1 129 QGVPESERPTSLWAVFFEAESIPSLLLLIFFTSLKMYFTLITLSYSNKLI 178
                 444555666688888999****************************9886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (235 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       752  (0.0419432); expected 358.6 (0.02)
Passed bias filter:                      270  (0.0150594); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1856.38
//
Query:       EPX73777.1  [L=1168]
Description: RNA polymerase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.9e-168  559.6   0.0   5.2e-168  559.2   0.0    1.2  1  RNA_pol   DNA-dependent RNA polymerase
    5.9e-77  259.3   0.0    8.4e-77  258.8   0.0    1.2  1  RPOL_N    DNA-directed RNA polymerase N-terminal


Domain annotation for each model (and alignments):
>> RNA_pol  DNA-dependent RNA polymerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  559.2   0.0  5.8e-172  5.2e-168       1     414 []     745    1168 .]     745    1168 .] 0.98

  Alignments for each domain:
  == domain 1  score: 559.2 bits;  conditional E-value: 5.8e-172
                  EE-HHHHHHHHHHHHHHHTT-TSSTHHHHHHHHHHTHHHHHHHHHTTT...TGGGGSSSHHHHHHHHHHHHHHHH..HGTTSEE-S-EEEEBSTHHH CS
     RNA_pol    1 kpLgeeglrwLkihlanlfGldkaslkervefveenleeildsaenplegkrwwlkaedpwqaLaacfelkkalesedpeeyvshlpvhqDGscnGL 97  
                  kpLg++gl+wLk+hlanlfG++k+ +  r +fv++n++e +ds ++pleg++ww++aedp+qaLaa+ e+++a++s +pe+yv+h+pv+qDG+cnGL
  EPX73777.1  745 KPLGPNGLNWLKVHLANLFGISKVDYASRQKFVDDNIAELFDSYDHPLEGRKWWASAEDPFQALAAIAEIARAIRSGNPESYVCHVPVQQDGTCNGL 841 
                  89*********************************************************************************************** PP

                  HHHHHHTT-HHHHHHTTSSSSSS---HHHHHHHHHHHHHHHHE.ESTHHHHHHHT.--HHHHHHHHHHGGGT-THHHHHHHHHHHTHHH.....TTH CS
     RNA_pol   98 QHYaaLgrDeegakqVNLvpsdrpqDvYsavaelvkekvekdaekgeelakllkgkikRkvvKqtvmtnvYgvtfvgareqiekqlkeleeveeeel 194 
                  QHYaaLgrD  ga++VNL p+drp+DvY ava++v +++e++ +kg+e+a++lk+ki+R vvK tvmtnvYgvt+vga++qi +ql+++ +++++ l
  EPX73777.1  842 QHYAALGRDPDGAHEVNLSPNDRPKDVYDAVAKIVISRLEQESAKGDEVASVLKDKIDRSVVKPTVMTNVYGVTYVGAKNQIISQLEKRGDIPKDML 938 
                  ************************************************************************************************* PP

                  HHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHS-EB-T......-..S--EEEEETTSEEEEE--EEESEEEEESSSTTE--EEEEESCEE- CS
     RNA_pol  195 lkaasylaklilksleelfkgakeiqkwLkelakliakslkae......k.lkstvvWttplglpvvqpYrkkkkkqvktalqsvvlsksekkdpvn 284 
                  ++++syl+k+++++l++lf++a+eiq+wL++++ li++sl ae      k + ++ +Wttplg+p++qpYr+ kk+qv+t+lqsv ++++++ ++v+
  EPX73777.1  939 NNYSSYLTKMVFRALRSLFERAHEIQDWLSTCSYLISNSLPAEfvkqghKdKLTPTIWTTPLGFPIIQPYRNFKKRQVQTNLQSVCIEDRDRVASVE 1035
                  *******************************************88777625789******************************************* PP

                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS--EEESSSEEEE-HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTSTGGGSS........... CS
     RNA_pol  285 krkqkqafpPNfiHslDathmlltaleckeegltfaavHDsfwthaadvdelnkilreafvklhsedilerlaeefkerykkslllakvkkkse... 378 
                   rkq+ afpPNf+HslDath+++t+l++ke+++tfa+vHDs+wtha+dv++l ++lr+afv+lhs++i+e+l++ef++ryk+ ++++++ ++ +   
  EPX73777.1 1036 PRKQAAAFPPNFVHSLDATHLFMTCLKAKEADITFASVHDSYWTHACDVEQLGNLLRQAFVELHSQKIMEKLRNEFRKRYKNFMIPKEIARRYDlfi 1132
                  ***************************************************************************************9997666555 PP

                  ............SS-------S-SGGGGGG-TTTB. CS
     RNA_pol  379 vakkikavlvplelpevPkkGeldveevkeskYffs 414 
                   ++   + +vpl++p +P++G++d+++v+eskYffs
  EPX73777.1 1133 SSEDSDKKWVPLKIPLLPSQGTFDLTKVLESKYFFS 1168
                  66778899***************************7 PP

>> RPOL_N  DNA-directed RNA polymerase N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  258.8   0.0   9.4e-81   8.4e-77       1     335 [.     291     620 ..     291     621 .. 0.85

  Alignments for each domain:
  == domain 1  score: 258.8 bits;  conditional E-value: 9.4e-81
                 HHHHHHHHHHHHHHHHHHHHHHHHHHTTGGTHHHHHHHHHHHHHHHHHHHTSSSS--HHHH......................HTTTS-HHHHHHHHHH CS
      RPOL_N   1 rQlrlEedsveaaverwreeaeelkkrglatslsskslnallweWyealeeaikeelekve..ksekkekkteedkdraeygpfLrllppeklAaitil 97 
                 rQ+ lE++++ +a++ w++e+e++ +rg  +  ++k+ +al++eWy++l+e +++e ++++   ++ ++++ +   ++  +gpfL+ll++eklAa+ti 
  EPX73777.1 291 RQKLLEKSAIASAIDLWKAEYEDTFQRGGGALPKNKEASALFYEWYTELKEMFNQENKRLDsfYHRIETNAGNPYIAEGFCGPFLKLLKTEKLAALTII 389
                 8****************************9888899*************************88455556777889999********************* PP

                 HHHHHH....TSSS..........-BHHHHHHHHHHHHHHHHHHHHHHHHHTTT.TTCHHHHHHHHSTSHHHHHHHHHHHHHHHSHSSSTTT-TT.... CS
      RPOL_N  98 ellsll....stggvd......kgvkvarlaisvGkaveeeyraeqlkkkekkkkkkkkkkekkvkklkkkkkeakealakekeeekeelkrekaekla 186
                 e+++++    +    +      +gv ++rl  +vG++ e+e+ +e+l+++e++ k+  +++ k v    ++  +a +a  ke  + ++++++ k+++  
  EPX73777.1 390 EVIRSIssisT----QeeaeetHGVLISRLTDAVGRSFEREFLSERLQEEEREGKLRIRDNLKFV---FNNP-RAFRAAVKE-LRRNADENDGKWKH-- 477
                 ****9955531....223335588*************************8877764444332211...1111.111111111.11111223334433.. PP

                 ........SSSCHHHHHHHHHHHHHHHHHHSTSEEEEE.....................ESTT-EEEEEE-HHHHHHHHHHHHHTTS-TSS--BSS--B CS
      RPOL_N 187 eeeeekeeeeWpqeirakvGavLislLletakvpvtaedpetgekvteeqPAFyhsyqykkgkkvgviklnpelvkllkreplrdtltprhlPMlvpPk 285
                       + e+Wp+ + +k+Ga+ isl l++ak++ + ++p+tg  ++e + AF h+yqy +g+k gv+++  el+kl+++e ++ +++p++lPMlv+Pk
  EPX73777.1 478 ------ALESWPRYVTTKIGAIAISLFLQAAKMDIKFKRPDTGDITKESVSAFAHTYQYIHGRKSGVLRPRVELLKLIASEFQNPLIHPQMLPMLVRPK 570
                 ......3579***************************************************************************************** PP

                 --SSSBSEBSSSSSSBSEE-SS........HHHHHTB--HHHHHHHHHHH CS
      RPOL_N 286 pWtsynkGGYllsptklmRtkdskeqkeylkaasergdldqvfkgLdvLG 335
                 pW +++kGGY++s+++++R+k+++eq +y+k+as++g+l++++++L +LG
  EPX73777.1 571 PWVQWDKGGYYYSRESIIRLKGCTEQLDYIKEASHKGHLKKIYNALSALG 620
                 *************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1168 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       601  (0.0335211); expected 358.6 (0.02)
Passed bias filter:                      497  (0.0277205); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.76u 0.29s 00:00:01.05 Elapsed: 00:00:00.43
# Mc/sec: 8136.80
//
Query:       EPX73778.1  [L=910]
Description: spore wall assembly protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-30  105.5   5.1      3e-22   79.3   0.5    3.3  3  PH_4      Pleckstrin homology domain
    1.7e-08   34.9   0.6      0.023   15.2   0.1    4.1  3  PH        PH domain
    3.2e-05   23.5   0.2    9.2e-05   22.0   0.2    1.8  1  Spo7_2_N  Sporulation protein family 7
    0.00075   19.9   0.2        0.1   12.9   0.0    3.6  4  PH_9      Pleckstrin homology domain
  ------ inclusion threshold ------
      0.013   15.8   0.0        1.6    9.1   0.0    2.6  2  PH_6      Pleckstrin homology domain


Domain annotation for each model (and alignments):
>> PH_4  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.05   1.8e+02     154     179 ..     654     679 ..     597     681 .. 0.75
   2 !   79.3   0.5   8.5e-26     3e-22       2     112 ..     751     856 ..     750     865 .. 0.91
   3 !   24.7   0.1   4.8e-09   1.7e-05     149     183 .]     870     904 ..     861     904 .. 0.89

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.05
        PH_4 154 rlgvsgksivfmarsrqerdlWvlai 179
                    v+g si f+   +  rd+W+ ++
  EPX73778.1 654 VQMVNGMSILFQSYNQRTRDIWIEKL 679
                 3368999***************9876 PP

  == domain 2  score: 79.3 bits;  conditional E-value: 8.5e-26
        PH_4   2 sGvLyqkkkkhsafkkyfvvLipGflllfklfkrsktgaskktvhkeheltiplkdcYvysGkltelDLlernktfdeanpgehalprvyaDgwkSsee 100
                 +GvLy+++   + ++k+++vLipG+++ f+  +r+k g+ ++++h+++  +i+ k++Y+y+G +t +++ +++++ +     +++lpr ++DgwkS ++
  EPX73778.1 751 QGVLYMRS--GNLYEKCYAVLIPGKIIFFRDATRTKFGKLHRKTHFQKFSSIHFKNAYIYTGFTTITEFSKSSQKNE---GASNRLPRCHEDGWKSFDK 844
                 79999865..578*****************************************************99996665555...5899*************** PP

        PH_4 101 essrcfvlwfgk 112
                 +++  fv+  ++
  EPX73778.1 845 DEMLSFVIYSQS 856
                 ********8765 PP

  == domain 3  score: 24.7 bits;  conditional E-value: 4.8e-09
        PH_4 149 lksvsrlgvsgksivfmarsrqerdlWvlaiaaEl 183
                 +k+ ++ +++g++ +f ar rqerd+Wv +i  E+
  EPX73778.1 870 YKIPQKHDKKGNKFMFLARTRQERDVWVERISSEI 904
                 566788899************************98 PP

>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0         1   3.7e+03       4      33 ..     513     549 ..     510     580 .. 0.62
   2 !   14.5   0.0     1e-05     0.038      44     101 ..     628     680 ..     608     684 .. 0.90
   3 !   15.2   0.1   6.4e-06     0.023       5     104 ..     752     904 ..     748     905 .. 0.78

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1
                 EEEEEEETSSSSC.......SEEEEEEEEETTEEEEE CS
          PH   4 eGwLlkkgsgkkk.......swkkrwfvLkdsellyy 33 
                 eG+L++ +   +          kk +f++++  ll  
  EPX73778.1 513 EGYLIRLTTSAGRrgrfgrlFHKKLYFMVFNHLLLSI 549
                 7888877766653444555333446666665555444 PP

  == domain 2  score: 14.5 bits;  conditional E-value: 1e-05
                 EEEEEESTTEEEEEEECTTSSSSTSEEEEEESTSSSTEEEEEEESSHHHHHHHHHHHH CS
          PH  44 pkgsislsncevvevvatedpkrkfcfelriverngsrtyllqasseeerkeWikaiq 101
                   g+++ls+++ v++  t++++++++fe+ +v  ng  ++l+q  ++  r  Wi+ + 
  EPX73778.1 628 ANGFLDLSKVKHVRP--TANEPENNVFEVQMV--NG-MSILFQSYNQRTRDIWIEKLG 680
                 578899999999998..99**********999..99.9****************9986 PP

  == domain 3  score: 15.2 bits;  conditional E-value: 6.4e-06
                 EEEEEETSSSSCSEEEEEEEEETTEEEEESST........TCTTESSEEEEEESTTEEEEEEEC...........................TTSSSSTS CS
          PH   5 GwLlkkgsgkkkswkkrwfvLkdsellyyknd........ksekdkepkgsislsncevvevva...........................tedpkrkf 68 
                 G L+ ++++    ++k+++vL  ++++++++         ++++++++  si+ +n+ +    +                           +       
  EPX73778.1 752 GVLYMRSGN---LYEKCYAVLIPGKIIFFRDAtrtkfgklHRKTHFQKFSSIHFKNAYIYTGFTtitefskssqknegasnrlprchedgwK------- 840
                 666666655...5899*******************************************987668888877666655555555555555552....... PP

                 EEEE................................EESTSSS..TEEEEEEESSHHHHHHHHHHHHHHH CS
          PH  69 cfel................................riverng..srtyllqasseeerkeWikaiqsai 104
                                                         ++    +++ + a + +er  W++ i+s i
  EPX73778.1 841 ---SfdkdemlsfviysqseldyslvhalpdvykipQ---KHDkkGNKFMFLARTRQERDVWVERISSEI 904
                 ...055555555555*****************95542...333334********************9877 PP

>> Spo7_2_N  Sporulation protein family 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.2   2.6e-08   9.2e-05      18      58 ..      15      55 ..      10      60 .. 0.86

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 2.6e-08
    Spo7_2_N 18 speelsltsrvvlLGgIPelWlqeqrksiyksllklskyks 58
                s e+ls  ++++++G+IP ++l+  ++ + k++ ++s++++
  EPX73778.1 15 SVEHLSDLTNRLFIGPIPSNFLSGSSSFWKKRFQNYSRHQA 55
                889*******************9999999888888888776 PP

>> PH_9  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       1.6   5.6e+03      35      93 ..     124     192 ..     115     196 .. 0.48
   2 !   12.9   0.0   2.9e-05       0.1      83     114 ..     648     679 ..     607     683 .. 0.91
   3 ?   -1.7   0.0         1   3.7e+03      26      57 ..     762     793 ..     755     821 .. 0.65
   4 ?    2.1   0.0     0.068   2.4e+02      92     114 ..     878     900 ..     856     902 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1.6
        PH_9  35 klvLylykdee.........esesaetedlkslknakllgkirlhhaLaekasd...YkkkshvFrLqtad 93 
                 ++ L l ++ +         +s sa++++  s+ + ++ + ++ + + + ++ d    + +   F+L++++
  EPX73778.1 124 QDSLALSQNSNnrestlipySSDSARIRS--SFDVQRPNTAVSFQTSHSRQSFDrrsSNTRGLRFALRQSN 192
                 55555555544233344322222222222..3444455566666666666655533233366666666665 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 2.9e-05
        PH_9  83 kshvFrLqtadgaeylfqtsdakevqeWvdti 114
                  ++vF++q+ +g ++lfq  ++   + W++++
  EPX73778.1 648 ENNVFEVQMVNGMSILFQSYNQRTRDIWIEKL 679
                 679**************************998 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 1
        PH_9  26 WkevyavlkklvLylykdeeesesaetedlks 57 
                 ++++yavl  + +++++d ++ + ++++ ++ 
  EPX73778.1 762 YEKCYAVLIPGKIIFFRDATRTKFGKLHRKTH 793
                 67899999999999998877444444433322 PP

  == domain 4  score: 2.1 bits;  conditional E-value: 0.068
        PH_9  92 adgaeylfqtsdakevqeWvdti 114
                 ++g +++f + + +e + Wv++i
  EPX73778.1 878 KKGNKFMFLARTRQERDVWVERI 900
                 56889****************98 PP

>> PH_6  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.017        62      61     109 ..     626     679 ..     613     682 .. 0.76
   2 ?    9.1   0.0   0.00044       1.6      87     110 ..     878     901 ..     862     903 .. 0.90

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.017
        PH_6  61 aspsgvinLadasevaadg....eqkFhlta.kGkkhtFkasstaeRdnWvaql 109
                 +s++g ++L+ + +v +      ++ F ++  +G    F++ +   Rd W+++l
  EPX73778.1 626 SSANGFLDLSKVKHVRPTAnepeNNVFEVQMvNGMSILFQSYNQRTRDIWIEKL 679
                 578888888888766443211114567777679******************987 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00044
        PH_6  87 akGkkhtFkasstaeRdnWvaqlk 110
                  kG+k +F a + +eRd Wv+ + 
  EPX73778.1 878 KKGNKFMFLARTRQERDVWVERIS 901
                 59*******************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (910 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       484  (0.0269954); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.69u 0.26s 00:00:00.95 Elapsed: 00:00:00.43
# Mc/sec: 6283.93
//
Query:       EPX73779.1  [L=159]
Description: translation elongation factor eIF5A [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      4e-28   97.3   0.4    5.6e-28   96.8   0.4    1.2  1  eIF-5a    Eukaryotic elongation factor 5A hypusine, DNA-bindi
     0.0042   17.1   0.1     0.0067   16.4   0.1    1.3  1  EFP_N     Elongation factor P (EF-P) KOW-like domain


Domain annotation for each model (and alignments):
>> eIF-5a  Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.8   0.4   6.3e-32   5.6e-28       1      69 []      86     153 ..      86     153 .. 0.96

  Alignments for each domain:
  == domain 1  score: 96.8 bits;  conditional E-value: 6.3e-32
                 --EEEEEEEEEE-SS.EEEEEETT--EEE.EEGG..GB-HHHHTT--TT-E..EEEEEETTEEEEEEE- CS
      eIF-5a   1 nVkrkeyqLidIqdDgflsLmdddgetkeDlklpegelgkqikekfeegkdvlVtVlsamGeekiiavK 69 
                 +Vkr +yqL+ I dDgflsLm++dg+tk+D+++pege+g+qi+e feegkd++++V+samGee  ++v+
  EPX73779.1  86 VVKRDDYQLVHI-DDGFLSLMTSDGSTKDDVRIPEGEIGQQIEEGFEEGKDLIISVVSAMGEEIPLSVR 153
                 69**********.8*************************************************877765 PP

>> EFP_N  Elongation factor P (EF-P) KOW-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.1   7.4e-07    0.0067       3      50 ..      26      74 ..      24      81 .. 0.86

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 7.4e-07
                GG--TT-EEEETTEEEEEEEEEEEEETT.S--EEEEEEEETTTS-EEEE CS
       EFP_N  3 selkkGlvieidgklyvVlefehvkpGk.GqafvrvklknlrtGakvek 50
                s+l+k+  + i+g +++++e   +k Gk G a v +   ++ tG+k e 
  EPX73779.1 26 SSLRKNGHVVIKGRPCKIVEMSTSKTGKhGHAKVNIVAVDIFTGRKYED 74
                7899*********************996377999999999999988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       370  (0.020637); expected 358.6 (0.02)
Passed bias filter:                      333  (0.0185733); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1257.26
//
Query:       EPX73780.1  [L=368]
Description: gfo/idh/mocA family oxidoreductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.2e-22   80.1   0.0    3.5e-22   79.5   0.0    1.3  1  GFO_IDH_MocA    Oxidoreductase family, NAD-binding Rossmann f
    8.9e-17   61.2   0.0    1.4e-16   60.6   0.0    1.3  1  GFO_IDH_MocA_C  Oxidoreductase family, C-terminal alpha/beta 
    2.4e-05   25.0   0.0      4e-05   24.2   0.0    1.3  1  NAD_binding_3   Homoserine dehydrogenase, NAD binding domain
  ------ inclusion threshold ------
       0.14   12.9   0.0       0.28   11.9   0.0    1.5  1  CoA_binding     CoA binding domain
       0.26   11.5   1.2          2    8.7   1.8    2.0  2  Se-cys_synth_N  Selenocysteine synthase N terminal


Domain annotation for each model (and alignments):
>> GFO_IDH_MocA  Oxidoreductase family, NAD-binding Rossmann fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.5   0.0   9.9e-26   3.5e-22       2     118 ..       5     124 ..       4     126 .. 0.87

  Alignments for each domain:
  == domain 1  score: 79.5 bits;  conditional E-value: 9.9e-26
                   EEEEETTSHH.HHHHHHHHHHTTTTEEEEEEECSSHHHHHHH..HHHTTHEEESSHHHHHTCTTESEEEE-S-GGGHHHHHHHHHHTT-EEEEESSS CS
  GFO_IDH_MocA   2 rvaiiGaGki.gskhlrplnesqrleevvalldpdaeraeav..aesfgveaysdleelladpeidavivatpngtheelakaaleagkhvllEKPl 95 
                   + a+ G+G+     h + l +  ++ e+ a+++++a + +    ++  ++++y++l+elladp++++v+v  p++ h + + aal+agkhvl+EKP+
    EPX73780.1   5 KTAVLGTGMSaFIFHYPFLEALPEKFEIYAAWERRATAEHSKarSAYPNIKVYTQLDELLADPKVELVVVSLPPDAHVDAVTAALNAGKHVLCEKPF 101
                   7899***9996666665555666666*******998766655346667888********************************************** PP

                   -SSHHHHHHHHHHHHHHTS-EEE CS
  GFO_IDH_MocA  96 attveeakelvelaekkgklvsv 118
                   + t+ee k+l +la++k+ l++v
    EPX73780.1 102 TPTYEEGKRLFDLAKSKNLLLAV 124
                   ******************99988 PP

>> GFO_IDH_MocA_C  Oxidoreductase family, C-terminal alpha/beta domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.6   0.0   3.8e-20   1.4e-16       1     115 [.     138     252 ..     138     253 .. 0.93

  Alignments for each domain:
  == domain 1  score: 60.6 bits;  conditional E-value: 3.8e-20
                     HHHHHTTTTSSEEEEEEEEECBEEECHHHHCCGGSHHCSTSHHHHTCHHHHHHHHHHHTSEEEEEEEEE.SEEESCTCCSCSEEEEEEEEEEETT CS
  GFO_IDH_MocA_C   1 KelIengklGevvsvdvwtldtragaeakkrwkrrkkksgGvlgdlgiHdiDllqwLfGqppsvvaalgrmrqnaeaaededaavmsvlnlekgs 95 
                     K  I++g+lG++v    + +++r++ ++k +wk+ + +++G+++dlg H iD++ +LfG p sv+ + + +rq++   e+ed+++ +vl++  ++
      EPX73780.1 138 KDVIDSGRLGDIVEL--ESHIDRHRLFRKGNWKDVPSPGSGLVYDLGAHLIDQAVYLFGVPESVTGKVFCQRQIP-PLEVEDNFT-IVLHYPAKE 228
                     678************..7***************************************************999999.9*******6.777777777 PP

                     EE....EEEEEECCTSSSEEEEEE CS
  GFO_IDH_MocA_C  96 ge....vitlesgvskglsiryvi 115
                     g+    vi+ ++++s+gls ry i
      EPX73780.1 229 GKlpveVILRSTSISCGLSFRYCI 252
                     7777779**************987 PP

>> NAD_binding_3  Homoserine dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.0   1.1e-08     4e-05      21     110 ..      29     118 ..      21     124 .. 0.84

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 1.1e-08
                    EEEEEEEEESS.EEE-TTHHHHHT--CB---HHHHHHHHS-EEEEE-S--HHHHTTHHHHHHTTEEEE-S--CGGG-HHHHHHHTSSSTTS CS
  NAD_binding_3  21 elelvavadrd.sllskdrkallasealtldlddliahldpdvvVEcasseavaelvlkaLkagkdvvtankgaladealyeeLreaaean 110
                    ++e++a ++r+ ++++ ++ +  ++ +++++ld+l+a++++ +vV   +++a  + v++aL+agk+v+          + +++L+++a+++
     EPX73780.1  29 KFEIYAAWERRaTAEHSKARSAYPNIKVYTQLDELLADPKVELVVVSLPPDAHVDAVTAALNAGKHVLCEKPFTP-TYEEGKRLFDLAKSK 118
                    799********999999999********************9999999999999**************86433333.467777777777765 PP

>> CoA_binding  CoA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   7.7e-05      0.28      45      88 ..      44      94 ..       2      98 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 7.7e-05
                 ET.......TEEEESCHHHHHHHCTTTEEEEES-HHHHHHHHHHHHHTT-S CS
  CoA_binding 45 vl.......glpvyksvdeleektevdvavitvPaesaqeavdelveagik 88
                 ++       +++vy+++del ++ +v+  v+ +P+++  +av ++++ag  
   EPX73780.1 44 HSkarsaypNIKVYTQLDELLADPKVELVVVSLPPDAHVDAVTAALNAGKH 94
                 3346666669*************8899999999**9999999999999865 PP

>> Se-cys_synth_N  Selenocysteine synthase N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   1.8   0.00057         2       8      37 ..      61      90 ..      59      91 .. 0.95
   2 ?   -0.9   0.0      0.57     2e+03      15      28 ..     297     310 ..     233     311 .. 0.88

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00057
  Se-cys_synth_N  8 DaLLtalearallaalpRalvrdavrafLd 37
                    D+LL+++ +   + +lp ++ +dav a+L 
      EPX73780.1 61 DELLADPKVELVVVSLPPDAHVDAVTAALN 90
                    9***************************96 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.57
  Se-cys_synth_N  15 earallaalpRalv 28 
                     +++a++ alp +++
      EPX73780.1 297 PLDADVKALPAPAL 310
                     68899999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (368 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       347  (0.0193541); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2746.55
//
Query:       EPX73781.1  [L=322]
Description: glucan 1,3-beta-glucosidase Bgl2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      4e-42  144.9   0.1    6.9e-42  144.1   0.1    1.4  1  Glyco_hydro_17  Glycosyl hydrolases family 17


Domain annotation for each model (and alignments):
>> Glyco_hydro_17  Glycosyl hydrolases family 17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.1   0.1   3.8e-46   6.9e-42       2     313 .]      44     318 ..      43     318 .. 0.94

  Alignments for each domain:
  == domain 1  score: 144.1 bits;  conditional E-value: 3.8e-46
  Glyco_hydro_17   2 gvnyGvkgnnlPstskvislyksnnikelrlyksdtevlkalaasnlevilnlpnsdlaelesnqskaavWvqdnvrpaaekvkikyiavgneis 96 
                      ++ G k n   + +k +++y +    +l+++  ++++++++a+s++++++nl     ++  ++  +++vW++d++++a ek   ++ + +++  
      EPX73781.1  44 NFCIGAK-NPN-GGCKTTDDYLA----DLNALANYSSTVRTYATSDCNTLQNLLPALSQASHNFSAYVGVWPTDDAHYAQEK--NALTQFLPKYG 130
                     6899999.555.99*********....***************************777777788999***********99999..9********** PP

  Glyco_hydro_17  97 pstsaakavflvpamanirnaltaaglsnkikvstalaldildssyppsqstfreevkpvvdpivvflagtnspllvnvyPYfvysndpsnvsLd 191
                     + ++++     v+++ ++rn+l+a+ l ++ik+++ l++++   +       +++++    d+++ + ag++ +++++++  f ++nd       
      EPX73781.1 131 VRNVKG---ITVGSEVLYRNDLSASVLGDRIKDVRGLVKSLGF-D-------VPVGT---ADSWNLWAAGSGDAAIQASD--FIMAND------- 202
                     ******...***************************9987643.4.......46777...9*******************..******....... PP

  Glyco_hydro_17 192 yalfqkqslvndnglayrnlfDaildavyaaqekkGgtdielvvsEtGWPsdGstgaslenaatyveNlikkvkeGtpskpgkgietyvfalFdE 286
                     + ++q+q++ n      + +  + l a+  +q+ kG ++++++v+EtGWP+ G     +++a+t+v+ ++++++   ++   kgi++  f++FdE
      EPX73781.1 203 FPYWQGQNTSN----MTNTFVSDTLTALERVQHVKGTNNVTFLVGETGWPTGGP---HYGEAQTSVDIAKQFFHDALCQVLKKGIDICYFEAFDE 290
                     9*********9....8889999*******************************9...899*********************************** PP

  Glyco_hydro_17 287 nqKpees.vekhfGvfkpdkslkYsldf 313
                       K  +s ve hfG + +++ +k+sl++
      EPX73781.1 291 PYKGADSnVEPHFGAYYSNRVPKFSLNC 318
                     ***88777******************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       504  (0.0281109); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2283.66
//
Query:       EPX73782.1  [L=506]
Description: seven transmembrane receptor-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.3e-76  257.7  21.6    1.6e-76  257.4  21.6    1.1  1  Lung_7-TM_R  Lung seven transmembrane receptor


Domain annotation for each model (and alignments):
>> Lung_7-TM_R  Lung seven transmembrane receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  257.4  21.6   8.8e-81   1.6e-76       2     295 .]     141     431 ..     140     431 .. 0.93

  Alignments for each domain:
  == domain 1  score: 257.4 bits;  conditional E-value: 8.8e-81
  Lung_7-TM_R   2 kktGlYclifskcdeklsksksslklkvkvnwknpegyLsaseapllklylimalayvllgilWlfilakykkdilkiqkliaavivlkmlelafvyi 99 
                  ++tGlYc++++ ++       ++  ++++v+w+n+ g L+a+e+p+l+l+ i+++ +vl++i+W+f ++++++d+l++qk+i++v++l++++  +++ 
   EPX73782.1 141 AETGLYCVFTAPLE------GDKEMYTISVTWENYFGELDATEYPHLFLNPILLILNVLVAIWWSFSVFRFRHDLLQVQKYISGVVILSLVCGFVSSG 232
                  79*********886......445679************************************************************************ PP

  Lung_7-TM_R 100 eYatinskGss..ievlavlasilsalkktlsrlliliislGygivkpkLgdllkkvlllglllfvlaevlelvresseesessakllkvllflipl. 194
                  ++ ++n +G++  ++++a+++si++a++++++ +l+li+slGy+iv p+Lg+ll+k+++lg+l+fv+ +++     +s + + +++++ vl+++ p+ 
   EPX73782.1 233 YFFYANANGYTntSKGIAFILSIFQAARQSYFGFLVLIVSLGYSIVVPTLGSLLRKCQILGGLQFVALSFF----LTSLFVSPNNQESLVLMIAAPIf 326
                  **********9999******************************************************777....33445555555567888888886 PP

  Lung_7-TM_R 195 alldlffvvwifrsLqktlrdlklkrnlvklklYrkftvvlvisvvasviivlvekill...ktvdsvekqWkeeWlit.afwelltlvllvviaylw 288
                    +++++++wi+ +L++t++dl+l++++vk+++Y++++vv++++++a+ +iv+++++l+    +++++ k+Wk +W+++ +++++l+++l+v+i+y+w
   EPX73782.1 327 LCTIFAMFFWIVLALNNTIQDLRLRKQTVKAQMYTRLWVVICFGIIAYGAIVIANAVLIginGQMNYYLKYWKLLWFLDyGYADILSFFLMVTILYIW 424
                  455599*************************************************99999999***************96666*************** PP

  Lung_7-TM_R 289 rPsqnnq 295
                  rP++nn+
   EPX73782.1 425 RPTENNR 431
                  *****95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (506 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1079  (0.0601818); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.28s 00:00:00.85 Elapsed: 00:00:00.42
# Mc/sec: 3647.36
//
Query:       EPX73783.1  [L=593]
Description: telomere end-binding protein Pot1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-24   85.6   0.5      2e-23   83.0   0.1    2.5  3  POT1PC    ssDNA-binding domain of telomere protection protein
    4.4e-18   65.5   0.7    3.4e-17   62.6   0.0    2.6  3  POT1      Telomeric single stranded DNA binding POT1/CDC13


Domain annotation for each model (and alignments):
>> POT1PC  ssDNA-binding domain of telomere protection protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.17   1.5e+03      76      91 ..     105     120 ..      66     192 .. 0.66
   2 !   83.0   0.1   2.2e-27     2e-23       2     154 ..     244     379 ..     243     380 .. 0.91
   3 ?   -2.5   0.0      0.46   4.2e+03      17      39 ..     450     472 ..     445     506 .. 0.49

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.17
                 S-EEEEEE-HHHHHHH CS
      POT1PC  76 kltlqitlydehaefa 91 
                 ++++++ l+d+  +  
  EPX73783.1 105 DWVVTVELWDPSCHPN 120
                 5777777777755443 PP

  == domain 2  score: 83.0 bits;  conditional E-value: 2.2e-27
                 GGG--SSSEEEEEEEEEEEE-..SS-EEEEEE-S---TTS--B-TTTSST.................T--S-SBS-EEEEEE-HHHHHHHTTT--TT-E CS
      POT1PC   2 lkdvqegeffDligqvvkkasddsgkvvLyvwDgtenpnlfskvdpeesalegdeedvkgYetksdkkwigpfgkltlqitlydehaefarenlkpgdf 100
                 l+++++ + f+ +gqvvk+++ ++++++L v+D +en+ ++  + +    ++ +             +w gp g++t+ + l+deh  ++r+ +++gd+
  EPX73783.1 244 LSEIRPSKRFTFYGQVVKTWY-TQKNFTLFVTDFSENEFFYPVTRE----TAPHM------------RWRGPQGRYTVRCILWDEHDYYCRNYVQEGDY 325
                 899*****************9.566799***********9988877....44555............9******************************* PP

                 EEEEEEEEEE-TTS.-EEEEE-SSTTGCS--EEEEE.TTSGGGHHHHHHHHHHHH CS
      POT1PC 101 vrLrNvhiklgrkgsklegflhggrkygrgikvlpl.endprlkellrrkreyek 154
                 v+++N ++kl+r g +le+++hg+   + + +++++  + p+l+ l++rkr+y k
  EPX73783.1 326 VFIKNARAKLDRIG-QLECVMHGDPGQKYKSSIEKVdPSVPELNSLKERKRSYVK 379
                 *************9.9******999988888888854899*************87 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 0.46
                 EEEEE-..SS-EEEEEE-S---T CS
      POT1PC  17 vvkkasddsgkvvLyvwDgtenp 39 
                 +v+ ++ d +k+++ ++D    +
  EPX73783.1 450 IVDFWPRDLTKFSVPISDSDVTE 472
                 55555555555555555433332 PP

>> POT1  Telomeric single stranded DNA binding POT1/CDC13
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.6   0.0   3.8e-21   3.4e-17      13     110 ..      83     178 ..      72     215 .. 0.85
   2 ?   -2.9   0.0      0.61   5.5e+03       9      39 ..     248     274 ..     241     281 .. 0.57
   3 ?   -0.5   0.0      0.11   9.7e+02      30      45 ..     349     373 ..     343     393 .. 0.71

  Alignments for each domain:
  == domain 1  score: 62.6 bits;  conditional E-value: 3.8e-21
                 EEEEEEEEEEEEECCC..SCCEEEEECCCCCTTTSCCHCTTTEEEEEEEECCCCCCCCGGCCCCEEECCCCEEEESTTSCECCSEEEEEEECCCTTSCE CS
        POT1  13 vvnviGvVidasfpkk..tggsdyvctfkivDpsknkgdendglrvvlFsknfedLpivkkvgdiirlhraklqsyngepqglanigfssswalFngnl 109
                 v n++G+V++++++k+   g+ d+v t++++Dps  +  + +glr++lFsk++ dLp++ ++g+i++l++++++ y++++qgl++++f++  +l n++l
  EPX73783.1  83 VTNLFGIVKTFTPKKQslRGTCDWVVTVELWDPS--CHPNAEGLRIHLFSKTEYDLPEITEEGQILLLQHITIRPYRDSKQGLSKTDFTY--QLWNKDL 177
                 689**********999966667************..*****************************************************6..5555555 PP

                 E CS
        POT1 110 n 110
                 +
  EPX73783.1 178 G 178
                 4 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.61
                 CTTEEEEEEEEEEEEEECCCSCCEEEEECCC CS
        POT1   9 aekkvvnviGvVidasfpkktggsdyvctfk 39 
                  ++k ++++G V+ +       +++++ +++
  EPX73783.1 248 RPSKRFTFYGQVVKTWY----TQKNFTLFVT 274
                 67788888887776663....3334444433 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.11
                 CCEEEEECCCCCTTT.........S CS
        POT1  30 ggsdyvctfkivDps.........k 45 
                 +g +y+++++ vDps         +
  EPX73783.1 349 PGQKYKSSIEKVDPSvpelnslkeR 373
                 6889***********7665555440 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (593 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.24s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 4173.10
//
Query:       EPX73784.1  [L=1096]
Description: IPT/TIG ankyrin repeat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-12   47.5   0.6    3.9e-12   46.1   0.6    1.8  1  TIG       IPT/TIG domain
    1.1e-09   38.4   0.2    5.6e-05   23.3   0.0    2.3  2  Ank_5     Ankyrin repeats (many copies)
    1.5e-08   35.1   0.0    3.3e-08   34.0   0.0    1.5  1  Ank_2     Ankyrin repeats (3 copies)
      2e-07   31.4   0.0    6.5e-05   23.4   0.0    2.6  2  Ank_4     Ankyrin repeats (many copies)
    3.8e-07   29.9   0.1      0.074   13.6   0.0    2.8  2  Ank_3     Ankyrin repeat
      4e-07   30.2   0.2      0.016   15.7   0.0    2.6  2  Ank       Ankyrin repeat


Domain annotation for each model (and alignments):
>> TIG  IPT/TIG domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.1   0.6   1.3e-15   3.9e-12       1      85 []     625     707 ..     625     707 .. 0.97

  Alignments for each domain:
  == domain 1  score: 46.1 bits;  conditional E-value: 1.3e-15
         TIG   1 PvissisPnsgsasgGttititGtnFgtnssdssvtiggtpctvtasvssttlvcttPpgpsg.llnvsvlvdgaqlrsdnttftY 85 
                 P is i Pn+gs+ gG  +ti G nF    + + +++g+tp+ vt s+s++t++ t+Pp + + +++v++l+ +  ++ +n tftY
  EPX73784.1 625 PLISRIIPNKGSIMGGYEVTILGANF---FNGLVCLFGETPAAVTFSWSDSTIIATCPPAAVAeTVPVKFLNYSMESSGTNATFTY 707
                 89************************...********************************555*********************9 PP

>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.1   3.6e-08   0.00011      11      56 .]     822     867 ..     815     867 .. 0.94
   2 !   23.3   0.0   1.9e-08   5.6e-05       1      45 [.     846     889 ..     846     895 .. 0.92

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 3.6e-08
       Ank_5  11 rldgggntpLhvAakygaadvvrlLlargadlnltdsrGltaldlA 56 
                   +++g t Lh+++ +g  +   +L+++gad+n +ds G+t+l++A
  EPX73784.1 822 VVNEFGRTLLHYSVAAGLGSATTFLINNGADINKRDSLGYTPLHYA 867
                 568999***************************************9 PP

  == domain 2  score: 23.3 bits;  conditional E-value: 1.9e-08
       Ank_5   1 LlehgpadvnrldgggntpLhvAakygaadvvrlLlargadlnlt 45 
                 L+++g ad+n +d  g+tpLh+Aa y ++++ ++Ll  ga+++lt
  EPX73784.1 846 LINNG-ADINKRDSLGYTPLHYAALYEYPEIYLRLLSKGASPDLT 889
                 899**.******************************888888776 PP

>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.0   0.0   1.1e-11   3.3e-08      20      81 ..     818     888 ..     800     890 .. 0.82

  Alignments for each domain:
  == domain 1  score: 34.0 bits;  conditional E-value: 1.1e-11
       Ank_2  20 adpn..k.ngktaLhyAakngnleivklLleh......adndgrtpLhyAarsghleivklLlekgadinl 81 
                 +d++  + +g+t Lhy++ +g   +  +L+++       d+ g+tpLhyAa + ++ei   Ll kga+++l
  EPX73784.1 818 TDFDvvNeFGRTLLHYSVAAGLGSATTFLINNgadinkRDSLGYTPLHYAALYEYPEIYLRLLSKGASPDL 888
                 56666536************97799******88564444477*********************99*99876 PP

>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0    0.0025       7.4      26      55 .]     819     847 ..     813     847 .. 0.87
   2 !   23.4   0.0   2.2e-08   6.5e-05      18      50 ..     844     875 ..     841     880 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0025
       Ank_4  26 dinaqdnrsGetalhiAakrgnveilklLl 55 
                 d + + n+ G+t+lh+ +  g  +++ +L+
  EPX73784.1 819 DFDVV-NEFGRTLLHYSVAAGLGSATTFLI 847
                 67888.************999888888876 PP

  == domain 2  score: 23.4 bits;  conditional E-value: 2.2e-08
       Ank_4  18 rlLlekgadinaqdnrsGetalhiAakrgnvei 50 
                  +L+++gadin++ ++ G t+lh+Aa+ +++ei
  EPX73784.1 844 TFLINNGADINKR-DSLGYTPLHYAALYEYPEI 875
                 58***********.999*********9888765 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.0   2.5e-05     0.074       2      30 ..     827     854 ..     826     855 .. 0.94
   2 !   13.4   0.0   2.9e-05     0.088       2      29 ..     860     886 ..     859     888 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 2.5e-05
       Ank_3   2 GetpLhlAarsgnleivkfLlenkgadvn 30 
                 G+t+Lh+ + +g  +   fL++ +gad+n
  EPX73784.1 827 GRTLLHYSVAAGLGSATTFLIN-NGADIN 854
                 9*************99******.8****9 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 2.9e-05
       Ank_3   2 GetpLhlAarsgnle.ivkfLlenkgadv 29 
                 G+tpLh+Aa++  +e ++++L +  ga +
  EPX73784.1 860 GYTPLHYAALYEYPEiYLRLLSK--GASP 886
                 9*************944777766..7666 PP

>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.0   6.7e-05       0.2       2      31 ..     827     857 ..     826     858 .. 0.75
   2 !   15.7   0.0   5.2e-06     0.016       2      30 ..     860     889 ..     859     891 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 6.7e-05
                 SBBHHHHHH..HHTTHHHHHHHH.TTTSTTCBT CS
         Ank   2 GnTPLHlAa..tngkkriiklLL.hGAnlnald 31 
                 G+T LH+ +    g  + + +L+ +GA++n +d
  EPX73784.1 827 GRTLLHYSVaaGLG--SATTFLInNGADINKRD 857
                 99****85533334..477788888******99 PP

  == domain 2  score: 15.7 bits;  conditional E-value: 5.2e-06
                 SBBHHHHHHHHTTHHHHHHHH.TTTSTTCB CS
         Ank   2 GnTPLHlAatngkkriiklLL.hGAnlnal 30 
                 G+TPLH+Aa +  ++i   LL +GA+++++
  EPX73784.1 860 GYTPLHYAALYEYPEIYLRLLsKGASPDLT 889
                 9********999988887799779999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1096 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       551  (0.0307323); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.75u 0.28s 00:00:01.03 Elapsed: 00:00:00.46
# Mc/sec: 7228.55
//
Query:       EPX73785.1  [L=771]
Description: vacuolar import and degradation protein Vid28 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.5e-14   51.0   6.3      0.004   17.2   0.0    7.8  8  Arm              Armadillo/beta-catenin-like repeat
    2.9e-07   30.8   3.4      0.026   14.9   0.3    5.1  5  HEAT_2           HEAT repeats
    5.5e-07   29.3  13.0      0.051   13.8   0.1    7.3  7  HEAT             HEAT repeat
     0.0018   18.4   1.3     0.0018   18.4   1.3    3.3  3  Cnd1             non-SMC mitotic condensation complex subunit
      0.002   18.6   5.9         27    5.4   0.0    5.8  7  HEAT_EZ          HEAT-like repeat
  ------ inclusion threshold ------
      0.068   13.1   9.2        0.2   11.6   0.7    4.0  4  DUF3361          Domain of unknown function (DUF3361)
       0.68   10.0   8.8        1.1    9.3   0.4    3.9  4  Atx10homo_assoc  Spinocerebellar ataxia type 10 protein domai
       0.92   10.1   7.8       0.65   10.6   0.3    4.0  4  Vac14_Fab1_bd    Vacuolar 14 Fab1-binding region


Domain annotation for each model (and alignments):
>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.0   0.0    0.0059        13       3      27 ..      39      63 ..      37      64 .. 0.86
   2 ?    0.3   0.0      0.36     8e+02      13      25 ..     316     329 ..     312     334 .. 0.74
   3 !    5.3   0.1    0.0093        21      15      35 ..     335     355 ..     331     355 .. 0.91
   4 !   17.2   0.0   1.8e-06     0.004       2      41 .]     417     456 ..     416     456 .. 0.94
   5 !    5.4   0.1     0.009        20      15      39 ..     472     496 ..     472     497 .. 0.94
   6 !    7.8   0.0    0.0016       3.6      16      38 ..     515     537 ..     511     537 .. 0.85
   7 ?    3.2   0.0     0.043        96      18      38 ..     560     580 ..     557     582 .. 0.87
   8 ?   -2.9   0.0       3.8   8.4e+03      20      30 ..     747     758 ..     746     763 .. 0.88

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0059
                HHHHHHHHTTHHHHHHHHTTTSSHH CS
         Arm  3 enkdavieaGavppLvrLLssedee 27
                + k++ ieaGa ++L++L ss+  +
  EPX73785.1 39 DRKELAIEAGAPKVLLNLFSSKESS 63
                568999**************98765 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.36
                 HHHHHHHHTT.TSS CS
         Arm  13 avppLvrLLs.sed 25 
                 ++p+L+rL s s+ 
  EPX73785.1 316 VIPILIRLFSqSQE 329
                 79*****9995443 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.0093
                 HHHHHHTTTSSHHHHHHHHHH CS
         Arm  15 ppLvrLLssedeevqeeAawA 35 
                 p+L+++L +e+e +q++Aa A
  EPX73785.1 335 PRLLAMLVNENEAMQKVAANA 355
                 89****************965 PP

  == domain 4  score: 17.2 bits;  conditional E-value: 1.8e-06
                 HHHHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHTT CS
         Arm   2 senkdavieaGavppLvrLLssedeevqeeAawALsNLaa 41 
                 +e +++v++a+ +p+ ++ Ls+++ +++++A+ ++  L++
  EPX73785.1 417 DEYRKMVVDANYLPIIIDALSNDSKDIRKAACECILSLSR 456
                 789*******************************988875 PP

  == domain 5  score: 5.4 bits;  conditional E-value: 0.009
                 HHHHHHTTTSSHHHHHHHHHHHHHH CS
         Arm  15 ppLvrLLssedeevqeeAawALsNL 39 
                 +pL++LL + d++vq  A + ++NL
  EPX73785.1 472 EPLMKLLIDSDVRVQSSAMAVICNL 496
                 59****************9999998 PP

  == domain 6  score: 7.8 bits;  conditional E-value: 0.0016
                 HHHHHTTTSSHHHHHHHHHHHHH CS
         Arm  16 pLvrLLssedeevqeeAawALsN 38 
                 +Lv+    +d ++++ A+wAL+N
  EPX73785.1 515 VLVANTAAKDKSLRRKAVWALRN 537
                 6777777899************9 PP

  == domain 7  score: 3.2 bits;  conditional E-value: 0.043
                 HHHTTTSSHHHHHHHHHHHHH CS
         Arm  18 vrLLssedeevqeeAawALsN 38 
                 ++L s+ed +vqe+++   +N
  EPX73785.1 560 LKLCSDEDIGVQEQILQVFRN 580
                 78999**********998888 PP

  == domain 8  score: -2.9 bits;  conditional E-value: 3.8
                 HTT.TSSHHHHH CS
         Arm  20 LLs.sedeevqe 30 
                 LL+ +++++v+e
  EPX73785.1 747 LLQnHPSPDVRE 758
                 889999999998 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.1     0.012        28      27      70 ..     328     371 ..     303     381 .. 0.81
   2 !    9.7   0.1   0.00048       1.1      31      78 ..     427     485 ..     408     494 .. 0.63
   3 !   14.9   0.3   1.1e-05     0.026       4      88 .]     432     536 ..     429     536 .. 0.77
   4 !    5.6   0.0    0.0092        21       6      52 ..     518     575 ..     513     594 .. 0.72
   5 ?    5.0   0.0     0.014        32       7      28 ..     747     768 ..     742     769 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.012
      HEAT_2  27 ignpealpaLvellededpavRraaaeaLgaigdpealpaLkel 70 
                 + ++++ p L+ +l +e++a ++ aa+a + i ++e l+   + 
  EPX73785.1 328 QETQQIAPRLLAMLVNENEAMQKVAANANVIISSKELLDKVVKH 371
                 456799**********************9999999888877665 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00048
      HEAT_2  31 ealpaLvellededpavRraaaeaLgai.........g..dpealpaLkellddddddv 78 
                  +lp+++++l++++ ++R+aa+e +  +         g  + +  + L +ll d d++v
  EPX73785.1 427 NYLPIIIDALSNDSKDIRKAACECILSLsrsvyilrtGlaEADLNEPLMKLLIDSDVRV 485
                 56899999999999999999998653221113333333213455677777777654443 PP

  == domain 3  score: 14.9 bits;  conditional E-value: 1.1e-05
      HEAT_2   4 LlqalendpdpevrraairaLg...........rignpealpaLvellededpavRraaaeaLgai....g.......dpealpaLkellddddddvvR 80 
                  + al +  ++++r+aa++++             +++ ++ + L +ll d+d +v+  a   +  +            +p+++++L +  + +d++++R
  EPX73785.1 432 IIDAL-SNDSKDIRKAACECILslsrsvyilrtGLAEADLNEPLMKLLIDSDVRVQSSAMAVICNLllkfSplrhkflTPDFINVLVANTAAKDKSLRR 529
                 67889.77889**********9777777777655666699*******************99885332222233334548***********999999966 PP

      HEAT_2  81 eaAaeaLa 88 
                  +A++aL+
  EPX73785.1 530 -KAVWALR 536
                 .5799995 PP

  == domain 4  score: 5.6 bits;  conditional E-value: 0.0092
      HEAT_2   6 qalendpdpevrraairaLg.......rignpea..........lpaLvellededpavRraaa 52 
                 +     +d+ +rr+a++aL        +     +          ++ +++l++ded  v++++ 
  EPX73785.1 518 ANT-AAKDKSLRRKAVWALRnsvyendE-----IlkreiiqklgRNQVLKLCSDEDIGVQEQIL 575
                 444.5789999*********76444442.....4333336666788999999999999888766 PP

  == domain 5  score: 5.0 bits;  conditional E-value: 0.014
      HEAT_2   7 alendpdpevrraairaLgrig 28 
                 +l+n+p+p+vr ++ +aL+ri+
  EPX73785.1 747 LLQNHPSPDVRERVKDALARIH 768
                 5789999999999999998875 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.25   5.7e+02      14      29 ..     285     300 ..     284     301 .. 0.87
   2 ?   -1.9   0.1       2.7     6e+03       3      22 ..     335     354 ..     333     355 .. 0.73
   3 !   13.8   0.1   2.3e-05     0.051       2      29 ..     429     456 ..     429     458 .. 0.92
   4 ?    4.4   0.1     0.025        56       4      28 ..     473     497 ..     470     500 .. 0.89
   5 ?    1.7   0.1      0.18   4.1e+02       2      25 ..     513     536 ..     512     537 .. 0.86
   6 ?    4.0   0.0     0.034        76       4      28 ..     558     582 ..     556     582 .. 0.87
   7 !    5.8   0.0    0.0085        19       8      27 ..     747     767 ..     743     768 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.25
                 HHHHHHHHHHHHHHHH CS
        HEAT  14 peVReaAakaLgalae 29 
                 +++R  A+ ++++l++
  EPX73785.1 285 SSIRLLALSCIVTLYK 300
                 579*********9987 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 2.7
                 HHHHHHHT-SSHHHHHHHHH CS
        HEAT   3 PlllkllsDpspeVReaAak 22 
                 P ll +l  ++    + Aa+
  EPX73785.1 335 PRLLAMLVNENEAMQKVAAN 354
                 999***97777776777765 PP

  == domain 3  score: 13.8 bits;  conditional E-value: 2.3e-05
                 HHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgalae 29 
                 lP+++ +ls +s ++R+aA++++  l++
  EPX73785.1 429 LPIIIDALSNDSKDIRKAACECILSLSR 456
                 8**********************88875 PP

  == domain 4  score: 4.4 bits;  conditional E-value: 0.025
                 HHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAakaLgala 28 
                 +l+kll D++ +V ++A   +++l+
  EPX73785.1 473 PLMKLLIDSDVRVQSSAMAVICNLL 497
                 699**************99999885 PP

  == domain 5  score: 1.7 bits;  conditional E-value: 0.18
                 HHHHHHHHT-SSHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLg 25 
                 +++l+ +   ++ + R+ A++aL 
  EPX73785.1 513 INVLVANTAAKDKSLRRKAVWALR 536
                 6788888899999*********96 PP

  == domain 6  score: 4.0 bits;  conditional E-value: 0.034
                 HHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAakaLgala 28 
                  +lkl+sD++  V e  ++ + ++a
  EPX73785.1 558 QVLKLCSDEDIGVQEQILQVFRNFA 582
                 689***********99999988775 PP

  == domain 7  score: 5.8 bits;  conditional E-value: 0.0085
                 HH.T-SSHHHHHHHHHHHHHH CS
        HEAT   8 ll.sDpspeVReaAakaLgal 27 
                 ll ++psp+VRe +  aL+++
  EPX73785.1 747 LLqNHPSPDVRERVKDALARI 767
                 5669********999999887 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.8     0.093   2.1e+02      55      85 ..     329     359 ..     284     423 .. 0.57
   2 !   18.4   1.3   7.8e-07    0.0018      25     109 ..     431     521 ..     418     556 .. 0.84
   3 ?   -1.5   0.0         1   2.2e+03      36      94 ..     526     590 ..     522     598 .. 0.61

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.093
        Cnd1  55 kekgflselaklleDenprVvanalaaltei 85 
                 + +++  +l+ +l +en+  ++ a +a   i
  EPX73785.1 329 ETQQIAPRLLAMLVNENEAMQKVAANANVII 359
                 2233444455555444433333333333333 PP

  == domain 2  score: 18.4 bits;  conditional E-value: 7.8e-07
        Cnd1  25 pLrkrLkDedpyVRktaaivvakL.....ilndmvkekgflselaklleDenprVvanalaalteisek.senaiynllpdiisklsdaln 109
                  +  +L+ ++  +Rk a  +++ L     il++   e ++ + l kll D++ rV+++a a++++++ k s+     l+pd i+ l+++  
  EPX73785.1 431 IIIDALSNDSKDIRKAACECILSLsrsvyILRTGLAEADLNEPLMKLLIDSDVRVQSSAMAVICNLLLKfSPLRHKFLTPDFINVLVANTA 521
                 56678999****************999999999999*********************************9988899999*****9996433 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 1
        Cnd1  36 yVRktaaivvakL.ilndmvkekgflsel.....aklleDenprVvanalaalteiseksenaiy 94 
                   R+ a+ ++ +  ++nd + +++++++l     +kl +De+  V++  l ++ + +  +++ +y
  EPX73785.1 526 SLRRKAVWALRNSvYENDEILKREIIQKLgrnqvLKLCSDEDIGVQEQILQVFRNFACPKGEGVY 590
                 55666666665544666665555555544221116677888888888888888877766555555 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.1      0.15   3.3e+02      23      48 ..     327     353 ..     325     355 .. 0.75
   2 ?    1.0   0.0      0.29   6.4e+02      24      50 ..     399     425 ..     391     426 .. 0.82
   3 ?    5.4   0.0     0.012        27      33      52 ..     432     451 ..     427     451 .. 0.82
   4 ?   -0.9   0.1       1.1   2.5e+03      29      48 ..     474     489 ..     468     494 .. 0.71
   5 ?    5.2   0.1     0.014        30      30      54 ..     513     537 ..     508     537 .. 0.72
   6 ?    5.2   0.0     0.014        31       3      34 ..     527     555 ..     525     581 .. 0.67
   7 ?   -0.7   0.0         1   2.3e+03      35      54 ..     746     766 ..     734     767 .. 0.74

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.15
     HEAT_EZ  23 qplvpeilpaLlalLnddsd.eVRaaA 48 
                 +++ ++i p Lla+L +++  + + aA
  EPX73785.1 327 SQETQQIAPRLLAMLVNENEaMQKVAA 353
                 67899**********777762446555 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.29
     HEAT_EZ  24 plvpeilpaLlalLnddsdeVRaaAag 50 
                 +l+ e l +++a+L++++de R+ ++ 
  EPX73785.1 399 DLIMESLLLFIAALTTSKDEYRKMVVD 425
                 56667788999*********9998775 PP

  == domain 3  score: 5.4 bits;  conditional E-value: 0.012
     HEAT_EZ  33 LlalLnddsdeVRaaAagaL 52 
                  + +L++ds+++R+aA+ ++
  EPX73785.1 432 IIDALSNDSKDIRKAACECI 451
                 56679999*********885 PP

  == domain 4  score: -0.9 bits;  conditional E-value: 1.1
     HEAT_EZ  29 ilpaLlalLnddsd.eVRaaA 48 
                 ++++L+     dsd +V+  A
  EPX73785.1 474 LMKLLI-----DSDvRVQSSA 489
                 566666.....6666998776 PP

  == domain 5  score: 5.2 bits;  conditional E-value: 0.014
     HEAT_EZ  30 lpaLlalLnddsdeVRaaAagaLgn 54 
                 +  L+a    ++++ R +A++aL+n
  EPX73785.1 513 INVLVANTAAKDKSLRRKAVWALRN 537
                 555665555578899*******987 PP

  == domain 6  score: 5.2 bits;  conditional E-value: 0.014
     HEAT_EZ   3 vRraAawaLGrlaggepellqplvpeilpaLl 34 
                 +Rr A+waL +   +++e l+    ei+  L+
  EPX73785.1 527 LRRKAVWALRNSVYENDEILK---REIIQKLG 555
                 799999999776667777777...56666665 PP

  == domain 7  score: -0.7 bits;  conditional E-value: 1
     HEAT_EZ  35 alL.nddsdeVRaaAagaLgn 54 
                  lL n++s++VR+ +  aL++
  EPX73785.1 746 FLLqNHPSPDVRERVKDALAR 766
                 577688999999987666665 PP

>> DUF3361  Domain of unknown function (DUF3361)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.91   2.1e+03      70      88 ..     163     188 ..     159     239 .. 0.49
   2 ?   11.6   0.7   8.9e-05       0.2      63     136 ..     349     432 ..     332     452 .. 0.78
   3 ?    3.3   0.0     0.032        72     101     129 ..     473     501 ..     467     513 .. 0.85
   4 ?    0.4   0.1      0.24   5.5e+02      48     114 ..     506     571 ..     497     581 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.91
     DUF3361  70 silqrslaiLesivlnss.......e 88 
                 +i   + ++L+++v + +       +
  EPX73785.1 163 QISSLAASVLDHMVSSRNpqvhsvpS 188
                 55556666777777666633333330 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 8.9e-05
     DUF3361  63 nksaadasilqrslaiLesivlnsselyelvekevtlesLiehLqssnqe.iqtnalaLlnALllkaddskrke.........l 136
                 +k aa+a+++ +s + L+++v  s+e+y + e    ++ L    ++++q+ + +++l L++A l++++d+ rk          +
  EPX73785.1 349 QKVAANANVIISSKELLDKVVKHSNEEYPITEAGCLTDALRLPTNTKEQNdLIMESLLLFIAALTTSKDEYRKMvvdanylpiI 432
                 344788****************************99999877776666666999999999999999999999994444444443 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.032
     DUF3361 101 sLiehLqssnqeiqtnalaLlnALllkad 129
                  L++ L +s+ ++q++a+a++  Lllk +
  EPX73785.1 473 PLMKLLIDSDVRVQSSAMAVICNLLLKFS 501
                 5889999999***************9966 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.24
     DUF3361  48 dtlsdeFikkiasivnksaadasilqrslaiLesivlnssel.yelvekevtlesLiehLqssnqeiq 114
                 + l+++Fi+  + ++ ++  d+s+ ++++  L + v  ++e    ++ +++  +++++  ++++  +q
  EPX73785.1 506 KFLTPDFINVLVANTAAK--DKSLRRKAVWALRNSVYENDEIlKREIIQKLGRNQVLKLCSDEDIGVQ 571
                 578999999998888877..99999***9999999988775535566666666666665555555555 PP

>> Atx10homo_assoc  Spinocerebellar ataxia type 10 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.1      0.84   1.9e+03      58      88 ..     325     355 ..     317     371 .. 0.66
   2 ?    3.1   0.1     0.042        94       4      53 ..     404     451 ..     401     457 .. 0.84
   3 ?    9.3   0.4   0.00049       1.1       3      76 ..     487     560 ..     485     576 .. 0.85
   4 ?   -0.6   0.0      0.61   1.4e+03       6      45 ..     621     660 ..     618     663 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.84
  Atx10homo_assoc  58 egneenqelvaeLeakgvvdeevLeelglev 88 
                       +++e q++  +L a  v ++e+++++  ++
       EPX73785.1 325 SQSQETQQIAPRLLAMLVNENEAMQKVAANA 355
                      5566666666666666666666666655444 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.042
  Atx10homo_assoc   4 elvrllgnlvyknkevqdkvreldgleliLsqcniDdnnPfirewailai 53 
                      +l+ +++ l+ ++ e ++ v++ + l++i+++ + D+++  ir+ a  +i
       EPX73785.1 404 SLLLFIAALTTSKDEYRKMVVDANYLPIIIDALSNDSKD--IRKAACECI 451
                      57789***************************9999886..566666655 PP

  == domain 3  score: 9.3 bits;  conditional E-value: 0.00049
  Atx10homo_assoc   3 relvrllgnlvyknkevqdkvreldgleliLsqcniDdnnPfirewailairnLlegnee..nqelvaeLeakgvv 76 
                      ++ ++++ nl  k +  + k+   d ++++  ++   d+   +r  a++a+rn + +n e   +e++++L +++v 
       EPX73785.1 487 SSAMAVICNLLLKFSPLRHKFLTPDFINVLVANTAAKDK--SLRRKAVWALRNSVYENDEilKREIIQKLGRNQVL 560
                      678999************************999987665..69***************996669999999888774 PP

  == domain 4  score: -0.6 bits;  conditional E-value: 0.61
  Atx10homo_assoc   6 vrllgnlvyknkevqdkvreldgleliLsqcniDdnnPfi 45 
                      +  l +++ ++ e +d + e++ + l+++ + + + + + 
       EPX73785.1 621 IFTLVHIASSDDEFRDAILEEKNILLLIKDTMLKETECYR 660
                      56666777888999*************9999988877665 PP

>> Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.1      0.84   1.9e+03      24      89 ..     189     252 ..     179     258 .. 0.58
   2 ?   -2.1   0.0       2.7     6e+03      70      96 ..     345     370 ..     303     371 .. 0.56
   3 ?   10.6   0.3   0.00029      0.65      26      89 ..     426     490 ..     403     499 .. 0.75
   4 ?    0.2   0.1       0.5   1.1e+03      27      86 ..     511     572 ..     503     580 .. 0.68

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.84
  Vac14_Fab1_bd  24 yleeivkpvlkcfsDkds..rvRyy.acEslyniakvakgevlkllneifdalvklvaDsdesvksgae 89 
                    ++++i +++  +     +  r Ry+ +c++l     v   ++l+   ++f+   kl    + +v +  e
     EPX73785.1 189 FCNTIFSIIAYTS-KLKEsvRYRYFkSCDTL----IVNSLAILNSYFKVFSLRAKLPQSIELEVETDYE 252
                    5555555444433.33330155555345544....3445567777778888888877777777766555 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 2.7
  Vac14_Fab1_bd  70 fdalvklvaDsdesvksgaelldrllk 96 
                     +a+ k++a + + + s+ elld+++k
     EPX73785.1 345 NEAMQKVAANA-NVIISSKELLDKVVK 370
                    34444444444.334456667777666 PP

  == domain 3  score: 10.6 bits;  conditional E-value: 0.00029
  Vac14_Fab1_bd  26 eeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlk.llneifdalvklvaDsdesvksgae 89 
                     + ++++++++s +++ +R  acE++  +++ +          ++ + l+kl+ Dsd  v+s+a 
     EPX73785.1 426 ANYLPIIIDALSNDSKDIRKAACECILSLSRSVYILRTGlAEADLNEPLMKLLIDSDVRVQSSAM 490
                    3568899**********************998754444324468999**************9885 PP

  == domain 4  score: 0.2 bits;  conditional E-value: 0.5
  Vac14_Fab1_bd  27 eivkpvlkcfsDkdsrvRyyac....EslyniakvakgevlkllneifdalvklvaDsdesvks 86 
                    ++++++++    kd+ +R  a+     s+y    ++k e++++l +  + + kl++D+d  v++
     EPX73785.1 511 DFINVLVANTAAKDKSLRRKAVwalrNSVYENDEILKREIIQKLGR--NQVLKLCSDEDIGVQE 572
                    5677777777777777776666111134455566777777777776..7889999999988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (771 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       626  (0.0349155); expected 358.6 (0.02)
Passed bias filter:                      415  (0.0231469); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.67u 0.29s 00:00:00.96 Elapsed: 00:00:00.44
# Mc/sec: 5271.82
//
Query:       EPX73786.1  [L=510]
Description: CAF assembly factor complex subunit B [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      8e-20   70.8   6.9    0.00016   22.4   0.1    6.4  7  WD40          WD domain, G-beta repeat
    1.4e-11   44.6   0.0    2.1e-05   24.7   0.0    4.4  4  ANAPC4_WD40   Anaphase-promoting complex subunit 4 WD40 domai
    1.3e-06   28.5   0.3      0.019   14.8   0.0    3.4  3  eIF2A         Eukaryotic translation initiation factor eIF2A
    0.00021   21.2   1.6          8    6.5   0.0    4.0  3  PD40          WD40-like Beta Propeller Repeat
  ------ inclusion threshold ------
       0.01   15.2   0.2       0.38   10.0   0.0    2.5  3  WD40_like     WD40-like domain
      0.017   14.1   0.0        5.8    5.8   0.0    2.9  3  Ge1_WD40      WD40 region of Ge1, enhancer of mRNA-decapping 
      0.049   14.2   3.9      0.096   13.2   3.9    1.5  1  Secretin_N_2  Secretin N-terminal domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.2   2.4e-06    0.0062       9      37 ..      17      46 ..       6      47 .. 0.77
   2 !   17.4   0.0   2.3e-06     0.006       4      37 ..      62      96 ..      59      97 .. 0.88
   3 !   22.4   0.1   6.2e-08   0.00016      12      38 .]     132     158 ..     120     158 .. 0.88
   4 !    6.6   0.0    0.0061        16      10      37 ..     171     199 ..     162     200 .. 0.80
   5 ?   -3.0   0.0       6.6   1.7e+04      17      26 ..     302     311 ..     295     314 .. 0.82
   6 ?   -1.9   0.0         3   7.6e+03       2      20 ..     342     361 ..     341     362 .. 0.81
   7 ?    4.7   0.0     0.023        60      10      26 ..     413     430 ..     408     439 .. 0.80

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 2.4e-06
                SSSSEEEEEEETTSSE.EEEEETTSEEEEE CS
        WD40  9 GHssvtslafspdgaw.lasGsdDgtvriW 37
                 H++++s++f+++g+  +a+++ D ++riW
  EPX73786.1 17 DHTPIYSIDFQKNGKNrFATCGGDSKIRIW 46
                4566************9776655******* PP

  == domain 2  score: 17.4 bits;  conditional E-value: 2.3e-06
                EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37
                l tl+ H + v+  +fsp g++la+++d gt+ +W
  EPX73786.1 62 LSTLSRHaQAVNVARFSPQGDMLATAGDEGTIFLW 96
                788999977897777******************** PP

  == domain 3  score: 22.4 bits;  conditional E-value: 6.2e-08
                 SEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  12 svtslafspdgawlasGsdDgtvriWd 38 
                  v+++++spdg+++++G +D++ ri++
  EPX73786.1 132 EVYDICWSPDGNYIVAGAMDNSTRIYN 158
                 499**************99******97 PP

  == domain 4  score: 6.6 bits;  conditional E-value: 0.0061
                 S.SSEEEEEEETTSSEEEE.EETTSEEEEE CS
        WD40  10 H.ssvtslafspdgawlas.GsdDgtvriW 37 
                 H   v ++ ++p + ++++ +s D+++ ++
  EPX73786.1 171 HlHYVQGVTWDPLKEYVVTqSS-DRSICVY 199
                 433699***********98446.****998 PP

  == domain 5  score: -3.0 bits;  conditional E-value: 6.6
                 EEETTSSEEE CS
        WD40  17 afspdgawla 26 
                 afspdg +l+
  EPX73786.1 302 AFSPDGFLLI 311
                 59***98876 PP

  == domain 6  score: -1.9 bits;  conditional E-value: 3
                 EEEEEEESS.SS.EEEEEEET CS
        WD40   2 qclrtltGH.ss.vtslafsp 20 
                 q++ +ltG  ++ + +++fsp
  EPX73786.1 342 QPVASLTGFsKPaI-AVRFSP 361
                 88999999977778.888888 PP

  == domain 7  score: 4.7 bits;  conditional E-value: 0.023
                 S.SSEEEEEEETTSSEEE CS
        WD40  10 H.ssvtslafspdgawla 26 
                 H s  t+la+s+dg+ l+
  EPX73786.1 413 HySTLTDLAWSDDGTILM 430
                 76779**********986 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.27   6.9e+02      30      65 ..      10      46 ..       3      49 .. 0.79
   2 ?    3.3   0.0     0.039     1e+02      38      64 ..      69      95 ..      58     106 .. 0.82
   3 !   24.7   0.0   8.1e-09   2.1e-05       4      89 ..      78     180 ..      75     183 .. 0.69
   4 !   10.6   0.0   0.00021      0.53      36      72 ..     412     448 ..     385     462 .. 0.80

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.27
  ANAPC4_WD40 30 wtleedkedsevrsLaWkpdgk.lLavaysdgevrll 65
                 w+ +++++   + s+ ++++gk  +a    d+++r+ 
   EPX73786.1 10 WHYDANDDHTPIYSIDFQKNGKnRFATCGGDSKIRIW 46
                 666778889999********97358888889999885 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.039
  ANAPC4_WD40 38 dsevrsLaWkpdgklLavaysdgevrl 64
                  + v+  +++p+g +La a ++g++ l
   EPX73786.1 69 AQAVNVARFSPQGDMLATAGDEGTIFL 95
                 567777889999999999999998865 PP

  == domain 3  score: 24.7 bits;  conditional E-value: 8.1e-09
  ANAPC4_WD40   4 cptmDLiAlatedgellvfRlng................qrvwtl..eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkseka 83 
                  +p+ D++A a ++g + +   +                 ++ w++     + + ev +++W+pdg+ ++ +  d++ r+++ ++g+++++   + +  
   EPX73786.1  78 SPQGDMLATAGDEGTIFLWVPSStpaatladdaeelalaKEFWKVktICRSMGAEVYDICWSPDGNYIVAGAMDNSTRIYNTQTGQLLSQNFDHLH-Y 174
                  566666666666666555555444555555555555555555665433568899*********************************987544433.4 PP

  ANAPC4_WD40  84 vtclgW 89 
                  v+ ++W
   EPX73786.1 175 VQGVTW 180
                  666666 PP

  == domain 4  score: 10.6 bits;  conditional E-value: 0.00021
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkv 72 
                   + s+ ++LaW+ dg++L++   dg ++ ++  ++++
   EPX73786.1 412 LHYSTLTDLAWSDDGTILMMTSIDGFCSSISFTNEEL 448
                  5667889********************9999998876 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.0   0.0   0.00092       2.4      59     119 ..      18      88 ..      10      97 .. 0.76
   2 !   14.8   0.0   7.5e-06     0.019     101     161 ..     131     190 ..     113     199 .. 0.56
   3 ?    1.3   0.0      0.11   2.8e+02     129     160 ..     397     431 ..     390     460 .. 0.54

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.00092
                 SS.EEEEEE-TTSS.-EEEEESSSSCEEEEEEC...S....CEEEEEE..EEES--EEEE-TTSSEEEEE- CS
       eIF2A  59 egpihdvaWspksk.efaviyGkmpakvslfdl...k....vkviskl..eeqkrNtiffspkgklvllaG 119
                 + pi+ +  ++++k +fa + G++  ++  +     +    ++ +s+l  ++q+ N   fsp+g ++++aG
  EPX73786.1  18 HTPIYSIDFQKNGKnRFATCGGDSKIRIWRYTCldeNmnpkIEFLSTLsrHAQAVNVARFSPQGDMLATAG 88 
                 5689999999887537999999999988888665543334455555552256889**************99 PP

  == domain 2  score: 14.8 bits;  conditional E-value: 7.5e-06
                 ES--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEE.EE-TT--.EEEE-TTSSEEEEE CS
       eIF2A 101 qkrNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiak.aeaanat.lvewspdgryvlTa 161
                 ++   i +sp g++++ + + n      i+++++ + +++ +++ + +  v w+p  +yv+T 
  EPX73786.1 131 AEVYDICWSPDGNYIVAGAMDNS---TRIYNTQTGQLLSQnFDHLHYVqGVTWDPLKEYVVTQ 190
                 44445566666666666555554...5566666555444313444333145666666666665 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.11
                 EEETTTTE...EEEEEE-TT--EEEE-TTSSEEEE CS
       eIF2A 129 iwdvkkkk...kiakaeaanatlvewspdgryvlT 160
                 ++d++ +k     a+++ ++ t++ ws dg+ ++ 
  EPX73786.1 397 VYDTQYCKpfyRAANLHYSTLTDLAWSDDGTILMM 431
                 44444333111223344444455555555554432 PP

>> PD40  WD40-like Beta Propeller Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.5   0.0    0.0031         8      16      24 ..     138     146 ..     132     146 .. 0.89
   2 !    6.2   0.1     0.004        10      14      23 ..     301     310 ..     297     312 .. 0.82
   3 ?    4.6   0.1     0.013        32      15      27 ..     421     433 ..     418     437 .. 0.89

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0031
                 E-TTSSEEE CS
        PD40  16 fSPDGkrla 24 
                 +SPDG++++
  EPX73786.1 138 WSPDGNYIV 146
                 *******96 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.004
                 EEE-TTSSEE CS
        PD40  14 PsfSPDGkrl 23 
                 P+fSPDG  l
  EPX73786.1 301 PAFSPDGFLL 310
                 9******655 PP

  == domain 3  score: 4.6 bits;  conditional E-value: 0.013
                 EE-TTSSEEEEEE CS
        PD40  15 sfSPDGkrlaFsS 27 
                 ++S DG+ l+ +S
  EPX73786.1 421 AWSDDGTILMMTS 433
                 8********9998 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0     0.028        72       1      29 [.      19      48 ..      19      58 .. 0.78
   2 ?   10.0   0.0   0.00015      0.38       2      36 ..     132     166 ..     131     220 .. 0.88
   3 ?   -3.3   0.0       1.6   4.2e+03      55      74 ..     428     447 ..     420     456 .. 0.63

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.028
   WD40_like  1 eeiYsidiskkgs.lilyGgkddkctvlkl 29
                ++iYsid++k+g+  ++  g d k+++   
  EPX73786.1 19 TPIYSIDFQKNGKnRFATCGGDSKIRIWRY 48
                68********99525888888888888765 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00015
   WD40_like   2 eiYsidiskkgslilyGgkddkctvlkleslesvs 36 
                 e+Y i  s++g++i+ G+ d+  ++++++++++ s
  EPX73786.1 132 EVYDICWSPDGNYIVAGAMDNSTRIYNTQTGQLLS 166
                 9*****************************98876 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 1.6
   WD40_like  55 lilvvtlDGtillsllenee 74 
                  ++++++DG  +   ++nee
  EPX73786.1 428 ILMMTSIDGFCSSISFTNEE 447
                 34455667766666666665 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0    0.0023       5.8     183     213 ..      64      95 ..      40      98 .. 0.80
   2 ?   -1.1   0.0      0.28   7.1e+02     188     215 ..     131     158 ..     112     173 .. 0.77
   3 ?    4.5   0.0    0.0057        15     187     210 ..     414     437 ..     401     446 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0023
    Ge1_WD40 183 kieehs.liveaafspdGtalatasedGevkf 213
                  +++h+  +  a fsp G  lata  +G++ +
  EPX73786.1  64 TLSRHAqAVNVARFSPQGDMLATAGDEGTIFL 95 
                 45667657899*****************9865 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.28
    Ge1_WD40 188 sliveaafspdGtalatasedGevkffq 215
                 +++ +  +spdG  + + ++d   + + 
  EPX73786.1 131 AEVYDICWSPDGNYIVAGAMDNSTRIYN 158
                 4677888899999999999998888875 PP

  == domain 3  score: 4.5 bits;  conditional E-value: 0.0057
    Ge1_WD40 187 hsliveaafspdGtalatasedGe 210
                  s++++ a+s dGt l ++s dG+
  EPX73786.1 414 YSTLTDLAWSDDGTILMMTSIDGF 437
                 47999******************7 PP

>> Secretin_N_2  Secretin N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   3.9   3.7e-05     0.096       2      53 ..     218     268 ..     217     289 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 3.7e-05
  Secretin_N_2   2 rtFpinylamkrsGlsntsvtsGsvsssgssssssssssss.sgsssssssss 53 
                   r+ +i+yl++++s   ++sv + ++s+++  ++ ++ss+ + +gsss+s+++ 
    EPX73786.1 218 RIHRIDYLNTQNS--KSSSVPTQQTSDVDVDNDRNGSSKYEdNGSSSGSQTNM 268
                   6779*********..9999**********999999999977677777666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (510 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       512  (0.0285571); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.41
# Mc/sec: 3704.54
//
Query:       EPX73787.1  [L=500]
Description: DNA replication ATPase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.9e-57  193.8   0.0    2.7e-57  193.4   0.0    1.2  1  MgsA_C           MgsA AAA+ ATPase C terminal
    1.3e-21   76.8   0.0    2.9e-21   75.6   0.0    1.6  1  AAA_assoc_2      AAA C-terminal domain
    2.1e-15   57.3   0.1    3.5e-15   56.6   0.1    1.4  1  AAA              ATPase family associated with various cellul
    8.9e-12   45.0   0.0    1.7e-11   44.1   0.0    1.5  1  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    7.7e-08   32.4   0.1    4.4e-07   30.0   0.1    2.2  1  AAA_5            AAA domain (dynein-related subfamily)
    7.4e-07   29.0   0.0     0.0099   15.6   0.0    2.3  2  Sigma54_activat  Sigma-54 interaction domain
    5.6e-06   26.8   0.1     0.0047   17.3   0.0    2.4  2  AAA_16           AAA ATPase domain
    8.5e-05   22.6   0.0    0.00015   21.8   0.0    1.3  1  AAA_14           AAA domain
     0.0002   20.7   0.0    0.00031   20.1   0.0    1.3  1  TIP49            TIP49 P-loop domain
     0.0002   20.6   0.0    0.00033   19.9   0.0    1.2  1  DUF815           Protein of unknown function (DUF815)
    0.00022   21.5   0.4     0.0028   17.9   0.4    2.2  2  AAA_22           AAA domain
    0.00056   20.1   0.0      0.001   19.2   0.0    1.4  1  AAA_2            AAA domain (Cdc48 subfamily)
    0.00087   18.7   0.1       0.63    9.4   0.0    2.2  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
     0.0032   16.2   0.6       0.14   10.8   0.0    2.1  2  AAA_13           AAA domain
     0.0078   16.2   0.6        1.3    9.0   0.1    2.2  2  ResIII           Type III restriction enzyme, res subunit
  ------ inclusion threshold ------
      0.015   15.8   0.0      0.032   14.8   0.0    1.5  1  ABC_tran         ABC transporter
      0.027   14.1   1.0      0.027   14.1   1.0    1.7  1  zf_UBZ           Ubiquitin-Binding Zinc Finger
      0.028   14.1   0.0      0.045   13.5   0.0    1.3  1  AAA_24           AAA domain
      0.029   14.4   0.1      0.067   13.3   0.0    1.7  1  CbiA             CobQ/CobB/MinD/ParA nucleotide binding domai
      0.033   14.1   0.0        9.7    6.0   0.0    2.6  2  ATPase_2         ATPase domain predominantly from Archaea
      0.035   13.3   0.0      0.058   12.6   0.0    1.3  1  NB-ARC           NB-ARC domain
       0.04   13.8   0.0      0.072   12.9   0.0    1.4  1  AAA_3            ATPase family associated with various cellul
      0.046   13.6   0.0      0.085   12.8   0.0    1.3  1  RsgA_GTPase      RsgA GTPase
      0.047   13.6   0.0      0.083   12.8   0.0    1.3  1  NACHT            NACHT domain
      0.067   13.2   0.0       0.18   11.8   0.0    1.7  1  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
      0.068   13.7   0.0       0.12   13.0   0.0    1.4  1  AAA_18           AAA domain
      0.079   13.4   0.0       0.14   12.5   0.0    1.5  1  RNA_helicase     RNA helicase
      0.081   12.7   0.0        0.2   11.5   0.0    1.6  1  zf_C2HC_14       C2HC Zing finger domain
      0.082   13.2   0.0       0.17   12.1   0.0    1.5  1  AAA_28           AAA domain
       0.13   12.0   0.2       0.73    9.5   0.2    2.1  1  AAA_30           AAA domain
       0.19   11.1   0.0       0.78    9.2   0.0    1.8  2  PhoH             PhoH-like protein
       0.24   10.7   0.8         16    4.7   0.2    2.3  2  DUF4729          Domain of unknown function (DUF4729)


Domain annotation for each model (and alignments):
>> MgsA_C  MgsA AAA+ ATPase C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  193.4   0.0   4.8e-60   2.7e-57       1     156 [.     335     493 ..     335     500 .] 0.93

  Alignments for each domain:
  == domain 1  score: 193.4 bits;  conditional E-value: 4.8e-60
                 TT-HHHHHHHHHHHHHTT--HHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHHHHHH-TTTTHHHHHHHHHHHHCS----GG.GHHHHHHHHH----.. CS
      MgsA_C   1 GSdpdAAlyylarmleaGedprfiaRRlviiAseDiGlAdpqalqlavaaaeaveriGlpEariaLaqavvylalapKSnaaykAikkaledvkekk.. 97 
                 G d+dA+lyyl rmle+Gedp ++aRR+v+iAseDiG Ad+++l+la +++++v+++G+pEa+++La+++v la+apKS  +ykA++++++ ++ ++  
  EPX73787.1 335 GCDVDASLYYLGRMLESGEDPLYVARRMVRIASEDIGTADNSMLPLASSTFTSVQQVGMPEADVILAHCAVALAMAPKSVDVYKAYNNVKRFLSMNPda 433
                 78******************************************************************************************9886533 PP

                 .-----GGGST...........T-T---GGG--SS------S-CCG--..--------HH CS
      MgsA_C  98 .slevPlhLrnaptklakklgygkgYkyphdypegvvkqqylpdelkkkkfYeptergle 156
                  ++e+Plh+rnapt+l+k+lgy+kgYky+ dy++g+vkq+ylp+++++ kf++  ++ le
  EPX73787.1 434 gRAEIPLHIRNAPTNLMKNLGYHKGYKYNPDYKDGLVKQEYLPESIRDVKFFRLPTELLE 493
                 377*********************************************9***97554444 PP

>> AAA_assoc_2  AAA C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.6   0.0   5.1e-24   2.9e-21       6      81 .]     263     334 ..     259     334 .. 0.96

  Alignments for each domain:
  == domain 1  score: 75.6 bits;  conditional E-value: 5.1e-24
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXHHHHHHHHHHHHH CS
  AAA_assoc_2   6 kleddalealaeladGDaRkaLnlLElaaeaaeakegkieitledleealqrkalryDkagdehYdliSAlhKSiR 81 
                  ++++++le++ ++ dGDaR aLn+LE+a+   +    +  itle+++e l r+++ yD+ gd hYd+iSA+hKS+R
   EPX73787.1 263 NIDPSILEYVSAITDGDARMALNCLEMAIGLLR----QGPITLEEIKEKLVRSSAVYDRVGDVHYDTISAFHKSVR 334
                  589999*************************98....59************************************9 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.6   0.1   6.2e-18   3.5e-15       1     128 [.     125     234 ..     125     238 .. 0.90

  Alignments for each domain:
  == domain 1  score: 56.6 bits;  conditional E-value: 6.2e-18
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTS....TSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHH CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakeka....kpsilfiDEidalaksrsgseseeeervvnqLlteldg 95 
                 ++l+G+ GtGKT+la+ +a +++++fle+s++++         ++ r++f+e +++     +++i+f+DE++++++++           ++ +l+ +++
  EPX73787.1 125 MILWGNSGTGKTTLARIIAATTKSRFLEVSATSVS-------VQECRKIFEESQNHLrltgSKTIVFLDEVHRFNRAQ-----------QDIFLPLVEK 205
                 79*******************************99.......888999999877776888777***************...........********98 PP

                 TTTSSSTEEEEEEESS..GGGSTHHHHSTTSSEEE CS
         AAA  96 vkkkeskvivigatnr..pdkldpallrgRfdrki 128
                  +      ++igat++    +l++al+ +R+ + +
  EPX73787.1 206 GSI-----TLIGATTEnpSFRLNSALI-SRCPVFV 234
                 866.....89***999888999*****.9*98765 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.1   0.0   3.1e-14   1.7e-11       2     116 ..      93     211 ..      92     229 .. 0.74

  Alignments for each domain:
  == domain 1  score: 44.1 bits;  conditional E-value: 3.1e-14
      RuvB_N   2 rPksleeyigqekvkeklkifieaakkreealdhvllyGpPGlGkttlakiiakelgvklkitsgPvl..ekagdl....aalltnleekdvlfideih 94 
                 rP++l++y+gqe++  +  ++     + + +   ++l G  G Gkttla+iia+  ++++   s+  +  ++ + +       l    +k ++f+de+h
  EPX73787.1  93 RPTTLDDYVGQEELVGSRGVIR-NMIEHD-ECPSMILWGNSGTGKTTLARIIAATTKSRFLEVSATSVsvQECRKIfeesQNHLRLTGSKTIVFLDEVH 189
                 9**************9988754.444444.4567899*****************9999876666554411333333111134455556899******** PP

      RuvB_N  95 rlsraveevlysamedfrldiv 116
                 r++ra ++++ + +e  ++ ++
  EPX73787.1 190 RFNRAQQDIFLPLVEKGSITLI 211
                 *************999988764 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.1   7.8e-10   4.4e-07       2      98 ..     125     212 ..     124     227 .. 0.88

  Alignments for each domain:
  == domain 1  score: 30.0 bits;  conditional E-value: 7.8e-10
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------G-SEEEEESGGG--HHHHHHHHHHHHSSEEE..- CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraaregeilvlDEveraesevlnsLlslleerrlllee 98 
                 ++L G++GtgK++la+ +aa +++++++v  t+  + ++ +   e        + +   r   ++ i++lDEv+r +++ ++++l+l e+  + l  
  EPX73787.1 125 MILWGNSGTGKTTLARIIAATTKSRFLEVSATS-VSVQECRKIFE--------ESQNHLRLTGSKTIVFLDEVHRFNRAQQDIFLPLVEKGSITLIG 212
                 79***************************9998.88888888888........5566666778*************************999887665 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0    0.0004      0.22      23      48 ..     123     148 ..     103     171 .. 0.74
   2 !   15.6   0.0   1.8e-05    0.0099      93     132 ..     179     218 ..     168     235 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.0004
                      S-EEEECSTTSSHHHHHHHHHHHSTT CS
  Sigma54_activat  23 lsvlitGesGtGKellaraiheaskr 48 
                       s+++ G+sGtGK++lar i +++k 
       EPX73787.1 123 PSMILWGNSGTGKTTLARIIAATTKS 148
                      467889*************9876553 PP

  == domain 2  score: 15.6 bits;  conditional E-value: 1.8e-05
                      TTSEEEEETGGGS-HHHHHHHHHHHHHSEEESBTSSSEEE CS
  Sigma54_activat  93 dgGtlfLDeigelplelQekLlrvlqegevervGsskeik 132
                      ++ ++fLDe+++++ + Q  +l ++++g+++ +G+++e +
       EPX73787.1 179 SKTIVFLDEVHRFNRAQQDIFLPLVEKGSITLIGATTENP 218
                      56799*****************************987754 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   8.4e-06    0.0047      20      55 ..     118     150 ..     110     171 .. 0.71
   2 ?    7.2   0.0     0.011       6.1     121     158 ..     168     202 ..     154     211 .. 0.73

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 8.4e-06
      AAA_16  20 rsgrpelvllsGesGvGKsslvrellralekdggif 55 
                   +++++++l G+sG+GK++l+r ++   +k++  f
  EPX73787.1 118 EHDECPSMILWGNSGTGKTTLARIIAA-TTKSR--F 150
                 445669****************99994.44442..3 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.011
      AAA_16 121 ellkrllallsrderplvlvlDdlqwadeaslqllaaL 158
                 e+ +++l+l+ +   +++++lD+++++  a+++++  L
  EPX73787.1 168 EESQNHLRLTGS---KTIVFLDEVHRFNRAQQDIFLPL 202
                 455555544443...59****************95444 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.0   2.7e-07   0.00015       6      83 ..     126     198 ..     123     242 .. 0.77

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 2.7e-07
      AAA_14   6 vitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelilek..lkeekktylflDEiqevpewekal 83 
                 ++ G   +GKTtl++ ++ +     +++l+++  + + ++ ++     e+ +++  l++  kt++flDE+++ +++++ +
  EPX73787.1 126 ILWGNSGTGKTTLARIIAATTK---SRFLEVSATSVSVQECRKI---FEESQNHlrLTG-SKTIVFLDEVHRFNRAQQDI 198
                 67788899*****988887766...************9998854...344444434556.89**********99987654 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   5.6e-07   0.00031      24      96 ..      98     166 ..      83     231 .. 0.88

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 5.6e-07
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  24 eglvGqkkareaagvivelikekklaGravLlaGpsgtGktalaiaiskelgedvpfvalsgsevyslevkkt 96 
                 +  vGq++   + gvi ++i++++    +++l G+sgtGkt la  i+    ++  f  +s++ v  +e +k 
  EPX73787.1  98 DDYVGQEELVGSRGVIRNMIEHDECP--SMILWGNSGTGKTTLARIIAAT--TKSRFLEVSATSVSVQECRKI 166
                 568********************955..8999************999975..568999999999999998885 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   5.9e-07   0.00033      44     116 ..     113     188 ..      77     203 .. 0.77

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 5.9e-07
      DUF815  44 teqfleglpannvLLwGarGtGKSslvkallneyaeegLrl..ievekedl.kelpklvellrerperfilfvDDL 116
                 +++++e+ ++  ++LwG+ GtGK +l + + ++++++ L +    v+ ++  k +++ +++lr +  + i+f+D +
  EPX73787.1 113 IRNMIEHDECPSMILWGNSGTGKTTLARIIAATTKSRFLEVsaTSVSVQECrKIFEESQNHLRLTGSKTIVFLDEV 188
                 456788889999********************99999977622445555541456777889999**********97 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.4     5e-06    0.0028       4      64 ..     121     170 ..     117     200 .. 0.72
   2 ?    3.5   0.0      0.14        79      74     105 ..     159     195 ..     149     214 .. 0.70

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 5e-06
      AAA_22   4 tagilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsst..sskdllrellral 64 
                 ++ +++++G sGtGKTtl+r ++ +          ++++++v ++s +  + +    +++++ 
  EPX73787.1 121 ECPSMILWGNSGTGKTTLARIIAATT---------KSRFLEVSATSVSvqECR----KIFEES 170
                 67789********************9.........999999999988844444....444433 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.14
      AAA_22  74 sseellealeqalrarav...ielliiDEaqhlr..s 105
                 s +e+++ +e+  ++ +    + ++ +DE+++++  +
  EPX73787.1 159 SVQECRKIFEESQNHLRLtgsKTIVFLDEVHRFNraQ 195
                 56667777776666666677799*********96432 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   1.8e-06     0.001       5     109 ..     124     209 ..     120     228 .. 0.86

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 1.8e-06
                 -EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTSEEEEETGGG-------------HHHHHHHHHHH CS
       AAA_2   5 silllgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegGivllDEidKihpkessgadvSregVqrdLLqil 103
                 s++l g++g+Gkt la+ +a + +    +++  + a+++      ++  + ++ +++       + iv+lDE+ +  +             q+++L+++
  EPX73787.1 124 SMILWGNSGTGKTTLARIIAATTK----SRFLEVSATSVSV----QECRKIFEESQNHLRLTGSKTIVFLDEVHRFNR-----------AQQDIFLPLV 203
                 78899**********999999998....5999999999999....5566667778889999999**************...........779999**** PP

                 H--EE- CS
       AAA_2 104 eggtlt 109
                 e+g +t
  EPX73787.1 204 EKGSIT 209
                 ***998 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.0    0.0011      0.63      24      61 ..     124     157 ..     118     175 .. 0.76
   2 !    7.1   0.0    0.0057       3.2     107     143 ..     180     216 ..     173     233 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0011
  Mg_chelatase  24 nlllvGppGsGKtmlakrlpsllpplseeealevakia 61 
                   +++l G++G+GKt la+    ++++ +++  lev++ +
    EPX73787.1 124 SMILWGNSGTGKTTLAR----IIAATTKSRFLEVSATS 157
                   689***********997....56677888888877643 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0057
  Mg_chelatase 107 nGvLfLDElpefkrkvlevLRePledgevtisrakak 143
                   + ++fLDE+  f+r   +++   +e+g++t+  a+++
    EPX73787.1 180 KTIVFLDEVHRFNRAQQDIFLPLVEKGSITLIGATTE 216
                   6799**************999999*****98766543 PP

>> AAA_13  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.2     0.035        20     255     280 ..       9      35 ..       2      40 .. 0.82
   2 !   10.8   0.0   0.00024      0.14      21      50 ..     127     155 ..     125     195 .. 0.75

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.035
      AAA_13 255 sdtCpFCgqplp.aerkaaLeahFdde 280
                 + +Cp Cgq+++ +++ a L++hF+++
  EPX73787.1   9 KCNCPTCGQEVDlSDINAHLDSHFETS 35 
                 579********95679999*****986 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00024
      AAA_13  21 iYGwNGaGKTtLSrllrslelgetepkfan 50 
                 ++G  G+GKTtL+r+++  ++ +   + ++
  EPX73787.1 127 LWGNSGTGKTTLARIIAATTKSRFL-EVSA 155
                 78999************98765543.3333 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.1     0.028        16      24      51 ..     122     148 ..     102     156 .. 0.70
   2 !    9.0   0.1    0.0024       1.3     108     147 ..     160     194 ..     146     217 .. 0.72

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.028
                 TSEEEEEESTTSTHHHHHHHHHHHH-S. CS
      ResIII  24 dkrglikmaTGtGKTlvaaklierllkk 51 
                    ++++   GtGKT +a ++i++ +k+
  EPX73787.1 122 CPSMILWGNSGTGKTTLA-RIIAATTKS 148
                 347889*********765.555555554 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0024
                 EEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS. CS
      ResIII 108 vttiqsldadseeeeeeseellrdrfdviiiDEaHrlgak 147
                 v +  ++ ++s     +++  l +++ +++ DE+Hr++++
  EPX73787.1 160 VQECRKIFEES-----QNHLRLTGSKTIVFLDEVHRFNRA 194
                 44444444444.....77888888999**********983 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   5.7e-05     0.032      15      52 ..     126     165 ..     118     228 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 5.7e-05
                 EEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGG..B CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..x RF
    ABC_tran  15 aivGenGaGKStLlkllagllkpteGeilldgkdlke..q 52 
                  + G++G+GK+tL++++a  +k    e+   + +++e  +
  EPX73787.1 126 ILWGNSGTGKTTLARIIAATTKSRFLEVSATSVSVQEcrK 165
                 689***************9998876666555555555443 PP

>> zf_UBZ  Ubiquitin-Binding Zinc Finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   1.0   4.8e-05     0.027       4      25 ..      11      32 ..       8      32 .. 0.94

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 4.8e-05
      zf_UBZ  4 lCerCgkeipeselqEHeDwHf 25
                 C+ Cg+e+  s+   H+D Hf
  EPX73787.1 11 NCPTCGQEVDLSDINAHLDSHF 32
                5******************998 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0     8e-05     0.045       4      27 ..     124     151 ..     121     199 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 8e-05
      AAA_24   4 kiliyGpsgiGKTtlakel....gpkpl 27 
                 +++++G sg+GKTtla+ +    + ++l
  EPX73787.1 124 SMILWGNSGTGKTTLARIIaattKSRFL 151
                 799*************988664444444 PP

>> CbiA  CobQ/CobB/MinD/ParA nucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   0.00012     0.067       3     119 ..     126     276 ..     124     284 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 0.00012
                 EEESSTTSSHHHHHHHHHHHHHHTT--EEEEEEEESSCCCCHHTTEB-HHHH..............................CCHCCCHHHHHHCHCHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..............................xxxxxxxxxxxxxxxxx RF
        CbiA   3 iastkGGvGKTtlaanLaralarrglrVllvDaDpqannlaileglendiep..............................dlkrllellealgkkka 71 
                 i  + +G+GKTtla  +a+  + r l+V +  + +q +  +i+e ++n ++                               ++  ++ + e+ + +++
  EPX73787.1 126 ILWGNSGTGKTTLARIIAATTKSRFLEVSATSVSVQ-ECRKIFEESQNHLRLtgsktivfldevhrfnraqqdiflplvekgSITLIGATTENPSFRLN 223
                 66789***********************99999999.44455666666655588888888888888889999888888888877777777777776655 PP

                 HH....EEEEEEEEESS...-TTCHHHHHHHHHHC.TS-EEE..EEE--CCHC CS
                 xx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxx..xxxxxxxxx RF
        CbiA  72 ll..lkiagvvlnrvdgeneetllkealeelkqry.gvpvlg..viprdeava 119
                  +   +   +vl + d+++  + l+ +++ +k r+ ++p ++  ++ +++a++
  EPX73787.1 224 SAliSRCPVFVLKKLDKSHVLKILEHGCQLEKDRLgEIPNIDpsILEYVSAIT 276
                 55778888888888888888888888888888888777777777777766665 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.035        20      11      44 ..     113     146 ..     112     154 .. 0.84
   2 ?    6.0   0.0     0.017       9.7     100     207 ..     161     252 ..     145     282 .. 0.69

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.035
    ATPase_2  11 leeilerepneiyfiYGpegsGKtaLlkeiienl 44 
                 +++++e ++ + + ++G  g GKt+L + i+   
  EPX73787.1 113 IRNMIEHDECPSMILWGNSGTGKTTLARIIAATT 146
                 677888888889999***********99887765 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.017
    ATPase_2 100 klvfkaielllekikkkgkkiiiiiDelqklidlglngaellvkeLlnliesltkekhlcvviclsSeglfiervyneselegrhkyilvddldketal 198
                 ++  k +e+  + ++ +g k i+++De+ +      +         ++++  l ++  ++++ +++++  f+     +s l+ r+    ++ ldk ++l
  EPX73787.1 161 QECRKIFEESQNHLRLTGSKTIVFLDEVHRFN--RAQ---------QDIFLPLVEKGSITLIGATTENPSFRL----NSALISRCPVFVLKKLDKSHVL 244
                 55567778888889999999999999999888..322.........334444444466666666666666666....8999999999999999999999 PP

    ATPase_2 199 nflkegfke 207
                 ++l+ g  +
  EPX73787.1 245 KILEHGC-Q 252
                 9999884.3 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0    0.0001     0.058       8      83 ..     112     181 ..     108     212 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.0001
                 HHHHHHCTTTSCSEEEEEEESTTSSHHHHHHHHCCSHCCCCCCBTEEEEEEEESXXHHHHHHHXXHHHHHCCCTTS CS
      NB-ARC   8 viekLlekdelqslvvalvGmgGvGKttlakqilnksdevegrFdsvawvvvsktdkseeiletilkeLslseddl 83 
                 vi ++ e+de     + l G  G GKttla+ i      +++rF  v   +vs + + ++i+e+  ++L l+ +++
  EPX73787.1 112 VIRNMIEHDECP--SMILWGNSGTGKTTLARIIAAT---TKSRFLEVSATSVSVQ-ECRKIFEESQNHLRLTGSKT 181
                 677778888888..899*************999877...7788888888888865.45667777777776665555 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   0.00013     0.072       3      99 ..     126     216 ..     124     226 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.00013
       AAA_3   3 llegvPGlaktllvkalakaldlefkriqftpdllPsdilGtevfeekekefefkkGpvfanllladeinrappktqsalleameerqvtvegethk 99 
                 +l g  G++kt+l++ +a + + +f  +  t+  +       ++fee++++++++     + +++ de+ r +   q  +l  +e   +t+ g+t++
  EPX73787.1 126 ILWGNSGTGKTTLARIIAATTKSRFLEVSATSVSVQ---ECRKIFEESQNHLRLTGS---KTIVFLDEVHRFNRAQQDIFLPLVEKGSITLIGATTE 216
                 788999***********************9996554...4789********999764...689999*******999**************9998876 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   0.00015     0.085     101     133 ..     124     156 ..     105     162 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 0.00015
                  EEEEECSTTSSHHHHHHHHCTT-----S----- CS
  RsgA_GTPase 101 tsvlvGqSGvGKStLinallpelelktgevsek 133
                   ++l G+SG GK+tL   ++ +++ +  evs++
   EPX73787.1 124 SMILWGNSGTGKTTLARIIAATTKSRFLEVSAT 156
                  5799*****************999999999976 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   0.00015     0.083       3      33 ..     125     155 ..     124     184 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 0.00015
                 EEEEC-TTTCHHHHHHHHHHHHCTS-SCCCC CS
       NACHT   3 vilqGeaGsGKTtLlqklalawaegklpqga 33 
                 +il G +G GKTtL++ +a + +++ l+  a
  EPX73787.1 125 MILWGNSGTGKTTLARIIAATTKSRFLEVSA 155
                 7899***************999988777665 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00032      0.18      21      48 ..     124     153 ..     102     174 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00032
                 EEEEEESTTSSHHHHHHHHHHHTT--..-- CS
        TsaE  21 vilLeGdLGaGKTtlvrglakalgve..ev 48 
                  ++L G+ G+GKTtl+r +a++ + +  ev
  EPX73787.1 124 SMILWGNSGTGKTTLARIIAATTKSRflEV 153
                 389*****************9987766444 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   0.00021      0.12       2      59 ..     126     198 ..     125     260 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 0.00021
      AAA_18   2 lltGtpGvGKttlakeLskrlgf...........gvnlrdvakenglllevdpe....aldeskrldedkldk 59 
                 +l G +G+GKttla+ ++  +++           ++++r+++ e++  l  +       lde +r+++ ++d 
  EPX73787.1 126 ILWGNSGTGKTTLARIIAATTKSrflevsatsvsVQECRKIFEESQNHLRLTGSktivFLDEVHRFNRAQQDI 198
                 67899************88875567888888888777777777776666555555566666666666666655 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   0.00026      0.14       2      39 ..     126     163 ..     125     227 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00026
  RNA_helicase   2 wlyGpsgeGKStlakeLakallkklklkkkdsvysrnp 39 
                   +l+G+sg+GK+tla+ +a++  +++ + ++ sv ++++
    EPX73787.1 126 ILWGNSGTGKTTLARIIAATTKSRFLEVSATSVSVQEC 163
                   799*************9999998886666555544443 PP

>> zf_C2HC_14  C2HC Zing finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00036       0.2       6      24 ..      11      29 ..       7      30 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00036
  zf_C2HC_14  6 nCkgCekqVcLSkMRaHia 24
                nC  C+++V LS++ aH+ 
  EPX73787.1 11 NCPTCGQEVDLSDINAHLD 29
                8999*************86 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00031      0.17       3      43 ..     126     167 ..     124     197 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00031
      AAA_28   3 vitGgestGKTtlleaLaar.gypvvpEaareileeklakge 43 
                 ++ G ++tGKTtl++ +aa+ + + ++ +a+ +  ++ +k +
  EPX73787.1 126 ILWGNSGTGKTTLARIIAATtKSRFLEVSATSVSVQECRKIF 167
                 68899*************986676767777777766665444 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.2    0.0013      0.73      21      57 ..     125     161 ..     112     212 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0013
      AAA_30  21 avltGpAGtGKttalkalreaweaaggrviglAptgk 57 
                 ++l G  GtGKtt+ + ++++ +++  +v + + + +
  EPX73787.1 125 MILWGNSGTGKTTLARIIAATTKSRFLEVSATSVSVQ 161
                 6889************999998887666666665555 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.0    0.0014      0.78      21      42 ..     124     145 ..     109     154 .. 0.77
   2 ?   -1.5   0.0       2.5   1.4e+03     119     147 ..     179     207 ..     170     217 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.0014
                 EEEEE--TTSSTTHHHHHHHHH CS
        PhoH  21 ivfaiGpaGtGKtylavalave 42 
                  ++  G++GtGKt la  +a++
  EPX73787.1 124 SMILWGNSGTGKTTLARIIAAT 145
                 57889***********999876 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 2.5
                 -SEEEEE-SGGG--HHHHHHHHTTB-TT- CS
        PhoH 119 ndafvilDEAQnttkeqmkmfltRlGens 147
                 ++++v+lDE   ++++q  +fl  + ++s
  EPX73787.1 179 SKTIVFLDEVHRFNRAQQDIFLPLVEKGS 207
                 57899*****9999999999987666655 PP

>> DUF4729  Domain of unknown function (DUF4729)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.2     0.029        16       2      35 ..       9      46 ..       8      53 .. 0.74
   2 ?    4.1   0.0     0.043        24     162     195 ..     146     180 ..     135     190 .. 0.80

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.029
     DUF4729  2 kCPlegCrrlvfssdllaHllsdHlre.....pklrlee 35
                kC +  C + v+ sd++aHl   H++      p ++++ 
  EPX73787.1  9 KCNCPTCGQEVDLSDINAHL-DSHFETssvssPPKQVSP 46
                799999*************7.667766566555555555 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.043
     DUF4729 162 srslirkvrn.lrksqdvkdflpkdenylllteqe 195
                 ++s + +v++   + q++++++++++n l+lt+++
  EPX73787.1 146 TKSRFLEVSAtSVSVQECRKIFEESQNHLRLTGSK 180
                 467777777744799****************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (500 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       778  (0.0433934); expected 358.6 (0.02)
Passed bias filter:                      656  (0.0365888); expected 358.6 (0.02)
Passed Vit filter:                       121  (0.00674884); expected 17.9 (0.001)
Passed Fwd filter:                        32  (0.00178482); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              32  [number of targets reported over threshold]
# CPU time: 0.65u 0.33s 00:00:00.98 Elapsed: 00:00:00.47
# Mc/sec: 3212.76
//
Query:       EPX73788.1  [L=1063]
Description: RecQ type DNA helicase Hrq1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-22   79.2   0.0    5.1e-22   78.5   0.0    1.4  1  DEAD        DEAD/DEAH box helicase
    4.2e-16   59.5   2.1    1.2e-15   58.1   2.1    1.8  1  DUF1998     Domain of unknown function (DUF1998)
    2.3e-12   47.2   0.1    8.5e-11   42.2   0.1    2.6  2  Helicase_C  Helicase conserved C-terminal domain
    3.4e-09   37.2   1.8    4.3e-09   36.9   0.5    1.8  2  CDT1        DNA replication factor CDT1 like
    2.8e-07   30.7   0.8      5e-07   29.9   0.0    1.9  2  ResIII      Type III restriction enzyme, res subunit


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.5   0.0   1.4e-25   5.1e-22       3     173 ..     314     488 ..     312     491 .. 0.86

  Alignments for each domain:
  == domain 1  score: 78.5 bits;  conditional E-value: 1.4e-25
                 HHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTST....SEEEEEETTSSHHHHHHHHHTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   3 iQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyid....lrvlliiggvaardqlskldng 97 
                  Q  ai+++ ++ +v+v+  T sGK+l+++ip+l+++   +++ +   ++v Pt++La+++ + l  +++y+     +r+  +  g++  + ++ + ++
  EPX73788.1 314 HQVDAINALWENLHVIVSTGTSSGKSLIYQIPILDEL---EKDIKSTSFFVFPTKALAQDQKRSLMDVLSYMPslahIRIDTF-DGDTPIEARNGIIEN 408
                 7999*********************************...6899999***********************9654444555544.456665666666599 PP

                 CSEEEEEHHHHHHHH..HCTSSH..CTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTST.TTSEEEEEESSBSHHH CS
                 xxxxxxxxxxxxxxx..xxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxx RF
        DEAD  98 vdivvgtpgrlddll..stgkln..lsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgk.lqrqvivlSATlpkdv 173
                 + i++++p++l++ +  + ++ +  +++++++VlDEa+ +    f+ ++  i+++l++i +  +    ++i +SAT+++ v
  EPX73788.1 409 ATIIFTNPDMLHQTIlpNHRRWDrfFKNLKLFVLDEAHIYNGI-FGVHVAMIMRRLRRIVEYYHnDRYRFISCSATIEQPV 488
                 *************666844444456*****************9.*****************99967777********9776 PP

>> DUF1998  Domain of unknown function (DUF1998)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.1   2.1   3.3e-19   1.2e-15       1      83 []     917    1008 ..     917    1008 .. 0.94

  Alignments for each domain:
  == domain 1  score: 58.1 bits;  conditional E-value: 3.3e-19
     DUF1998    1 lehalinalplflqcdesdlgteckapedep......rkrpariliydavp..gGaGiaekaaelleellraalelieecdCee.aGCpaCl 83  
                  ++hal++++p+f +   +d++teck+ e+e+      r+rp r+++yd+ +  gGa +++ka+  ++el+  a++++++c C+  +GCp+C+
  EPX73788.1  917 AQHALMSLMPIFSGNGGNDIKTECKSGEKEFkqeaseRRRPSRLIFYDNCGecGGADLCKKAYTYIDELMIMAVDRLQNCGCKIrEGCPQCI 1008
                  69***********************777766888999**************99*****************************5479*****7 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0     0.071   2.5e+02      13      61 ..     351     408 ..     339     417 .. 0.66
   2 !   42.2   0.1   2.4e-14   8.5e-11       6     110 ..     543     653 ..     535     654 .. 0.82

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.071
                 TTTTSEEEEEESSHHHHHH.........HHHHHHHTTSTEEEESTTSTHHHHHHHHHH CS
  Helicase_C  13 eeeggkilifvntidrlek.........vklllekkgikvavlhgelpqnereeileq 61 
                 e++ + +  fv  ++ l +         ++++ +  +i++ +++g++p + r+ i+e+
  EPX73788.1 351 EKDIKSTSFFVFPTKALAQdqkrslmdvLSYMPSLAHIRIDTFDGDTPIEARNGIIEN 408
                 4444444444444442222234344344666666669****************99986 PP

  == domain 2  score: 42.2 bits;  conditional E-value: 2.4e-14
                 HHHHHHHTTTTSEEEEEESSHHHHHH.HHHH......HHHT....TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSS CS
  Helicase_C   6 llellkleeeggkilifvntidrlek.vkll......lekk....gikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdl 93 
                 l++   l e++ ++++f++ ++ +e+ ++l+         +      k+  + +  + +er++i +++  g+   ++at+++e Gidi +++  i +++
  EPX73788.1 543 LIY---LCERKVRTIVFCRIRKACESlMRLVrgqlkaS--HkeylLEKIQSYRAGYTVQERRKIEKEMFCGNLYGIVATNALELGIDIGSLDAAITVGF 636
                 334...448999**********9986644445554431..1334556677788889***********99****************************** PP

                 SSSHHHHHHHHTTSSST CS
  Helicase_C  94 prnvtsyiqriGRtgRa 110
                 p +++++ q+ GR+gR 
  EPX73788.1 637 PSSLSNLRQQFGRAGRR 653
                 ****************6 PP

>> CDT1  DNA replication factor CDT1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.9   0.5   1.2e-12   4.3e-09       1      89 [.      50     155 ..      50     210 .. 0.67
   2 ?   -3.6   0.0       3.4   1.2e+04     124     139 ..     567     582 ..     547     591 .. 0.56

  Alignments for each domain:
  == domain 1  score: 36.9 bits;  conditional E-value: 1.2e-12
        CDT1   1 LPskYevLlelFkaldtivsmlenrke.titfakvkkaVermsrksfeekhLaqiktvyPeayklk..................qekqlkefgssgkak 80 
                 LP  Y +L ++Fk ++t   +l+ ++  titf  +  ++++++r++ ++ +L+q+ktv+Pe ++l+                  + +  +++ ++++++
  EPX73788.1  50 LPPAYNTLFDVFKIINTTYTFLYSKSSlTITFPLLNSSIRQSLRRDLSLLELSQLKTVVPELIELNyksleslimetnknvyadMPR--QTYTDGQHSQ 146
                 9********************998865489************************************777777765555555432222..2223333333 PP

        CDT1  81 askyelvie 89 
                 +s+y l++ 
  EPX73788.1 147 ESNYILTVF 155
                 345555554 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 3.4
        CDT1 124 rrkLleiVkehHekFL 139
                  r ++   k++H+++L
  EPX73788.1 567 MRLVRGQLKASHKEYL 582
                 3333344456666666 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.2       2.1   7.5e+03      97     121 ..     143     167 ..     110     195 .. 0.56
   2 !   29.9   0.0   1.4e-10     5e-07       4     170 ..     311     485 ..     308     486 .. 0.77

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 2.1
                 .......-SEEEEEHHHHHHTH... CS
      ResIII  97 kekdstnkkilvttiqsldadseee 121
                 ++++++n  ++v+ iq+  +  +++
  EPX73788.1 143 QHSQESNYILTVFLIQTSESTVKRQ 167
                 3334556666666666666655333 PP

  == domain 2  score: 29.9 bits;  conditional E-value: 1.4e-10
                 E-HHHHHHHHHHT......TTSEEEEEESTTSTHHHHH.HHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG.......GEEEESSS-B--.. CS
      ResIII   4 lreyQeeaienlleklkskrdkrglikmaTGtGKTlva.aklierllkkgkeekflflvprkslleqtleefkkflseayke...igkkvsgdkkka.k 97 
                 l+++Q +ai++l e+l      ++++   T +GK+l++ + + ++l k   ++  +f+ p+k+l +  ++ ++++ls   +        ++gd+ ++ +
  EPX73788.1 311 LYSHQVDAINALWENL------HVIVSTGTSSGKSLIYqIPILDELEKD-IKSTSFFVFPTKALAQDQKRSLMDVLSYMPSLahiRIDTFDGDTPIEaR 402
                 789*********9888......699999999*******77777777775.667999**********999887776664433244477778888888889 PP

                 ......-SEEEEEHHHHHHTH........HHHTTT-S....EEEEETGGGTTS......T....TTHHHHHT---..SEEEEEESS-S CS
      ResIII  98 ekdstnkkilvttiqsldadseeeeeeseellrdrfd....viiiDEaHrlgak.....k....swreilekfke..avllglTATpe 170
                 ++ ++n+ i++t+ ++l++ +       ++ + drf     +++ DEaH +++      +      r+i+e++ +  +  +  +AT+e
  EPX73788.1 403 NGIIENATIIFTNPDMLHQTI-----LPNHRRWDRFFknlkLFVLDEAHIYNGIfgvhvAmimrRLRRIVEYYHNdrYRFISCSATIE 485
                 9999*****************.....444444444444666********999966555515555888888887443488888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1063 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       723  (0.0403257); expected 358.6 (0.02)
Passed bias filter:                      566  (0.031569); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.74u 0.25s 00:00:00.99 Elapsed: 00:00:00.41
# Mc/sec: 7810.46
//
Query:       EPX73789.1  [L=300]
Description: ribosomal protein subunit L51-b [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      1e-19   71.4   0.2    4.7e-19   69.2   0.0    1.9  2  Mit_ribos_Mrp51  Mitochondrial ribosomal protein subunit


Domain annotation for each model (and alignments):
>> Mit_ribos_Mrp51  Mitochondrial ribosomal protein subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.2   0.0   2.6e-23   4.7e-19       4     108 ..       3     102 ..       1     149 [. 0.81
   2 ?    0.1   0.1     0.027   4.8e+02     287     329 ..     174     211 ..     107     237 .. 0.65

  Alignments for each domain:
  == domain 1  score: 69.2 bits;  conditional E-value: 2.6e-23
  Mit_ribos_Mrp51   4 laaLLRnSRLfslpkplpppalsasdtatlpyPthqaItTpksslargdWGLKrslPlksttskvsspvirvnalDtiehitdfesaadhtltl 97 
                      +a LLRnSR +sl k  ++   ++s+ ++l +P +q+ tT+++  argdWG Kr+lP      kv++++i +n+lD++ +  df+s+a  +  l
       EPX73789.1   3 FAYLLRNSRAASLTKCFQE--SNTSTANSL-FPLQQSLTTKQADGARGDWGCKRNLP------KVKTRYISINELDSVYNQMDFKSSARFVRLL 87 
                      678****************..888766666.**************************......9****************************** PP

  Mit_ribos_Mrp51  98 kkfqElgipl....k 108
                      + + + g +     +
       EPX73789.1  88 RNWFDAGFVRdpaeQ 102
                      *99888877644440 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.027
  Mit_ribos_Mrp51 287 ktpvpaRvlsprtsatgeskaklgvGGfvandpssstsaskvs 329
                      ++  +a +l+    +   s+a++g  G+v + p+++t ++++ 
       EPX73789.1 174 HRRLTAHILN----S-DASTAHYGLSGLVLRLPKTRTVSRNRT 211
                      3346666666....2.237889999999999999887776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (300 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       399  (0.0222544); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.38
# Mc/sec: 2365.77
//
Query:       EPX73790.1  [L=1100]
Description: WIP protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.12   12.3   0.0       0.36   10.7   0.0    1.8  1  POT1PC    ssDNA-binding domain of telomere protection protein


Domain annotation for each model (and alignments):
>> POT1PC  ssDNA-binding domain of telomere protection protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0     2e-05      0.36      68     120 ..     980    1031 ..     948    1064 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 2e-05
                  ...T--S-SBS-EEEEEE-HHHHHHH..TTT.--TT-EEEEEEEEEEE-TTS.-EEEE CS
      POT1PC   68 k..kwigpfgkltlqitlydehaefa..ren.lkpgdfvrLrNvhiklgrkgsklegf 120 
                  +  + i+p +k+t    +y + +++   ++  +kpgd+v+++Nv++  g+kg     +
  EPX73790.1  980 NltQNIEPINKRTFGAIVYANESNVTiqQNGeIKPGDIVTFENVKL-SGQKG-----T 1031
                  36688999999999999998886665544448*************9.33333.....3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1100 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       782  (0.0436165); expected 358.6 (0.02)
Passed bias filter:                      256  (0.0142785); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.72u 0.29s 00:00:01.01 Elapsed: 00:00:00.42
# Mc/sec: 7787.88
//
Query:       EPX73791.1  [L=203]
Description: RNA polymerase II-associated protein Rtr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.4e-16   58.4   2.4    1.6e-15   57.1   2.4    1.7  1  RPAP2_Rtr1  Rtr1/RPAP2 family
  ------ inclusion threshold ------
       0.06   13.5   1.0       0.14   12.3   1.0    1.6  1  Toxin_13    Neurotoxin B-IV-like protein


Domain annotation for each model (and alignments):
>> RPAP2_Rtr1  Rtr1/RPAP2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.1   2.4   1.8e-19   1.6e-15       2      75 .]      65     132 ..      64     132 .. 0.93

  Alignments for each domain:
  == domain 1  score: 57.1 bits;  conditional E-value: 1.8e-19
                 G--HHHHHHHHHHHHCTT--SSTT--S--SS-----------.....--TTGGGGT-SSHHHHHHHHHHHHCS- CS
  RPAP2_Rtr1   2 llspsdyddvveERniekkCGyplCnnsleedkrqkekyrisrkakkvvereelekfCSkaCaerslavraqLs 75 
                 +l++sdyd++v+ER++++ CGyp+C+n++++++    +yr++  ++ +v ++ l+ +CSk+C+  s  ++++Ls
  EPX73791.1  65 FLRKSDYDQIVKERKLAHVCGYPVCENAPRQQT----RYRLE--SQGMVRYAGLNYYCSKKCFLDSCNFMVNLS 132
                 89***************************7766....99988..9999*****************999999885 PP

>> Toxin_13  Neurotoxin B-IV-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   1.0   1.6e-05      0.14       8      45 ..      85     124 ..      81     129 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.6e-05
                 TTTHHHHHHHHHHHHH--TTG..GGTT-HHHHHHHHHHHH CS
    Toxin_13   8 ayPacenncrkkyddcikcqG..kwaGkrGkcaahcivqk 45 
                  yP cen  r++    +  qG  ++aG    c+  c +  
  EPX73791.1  85 GYPVCENAPRQQTRYRLESQGmvRYAGLNYYCSKKCFLDS 124
                 6***********9999999996679***********9864 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1148  (0.0640303); expected 358.6 (0.02)
Passed bias filter:                      695  (0.038764); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 1487.40
//
Query:       EPX73792.1  [L=227]
Description: SNARE Sec20 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-28   97.7   2.4    2.9e-28   97.6   0.9    1.9  2  Sec20     Sec20
  ------ inclusion threshold ------
       0.13   12.0   0.3       0.22   11.3   0.3    1.5  1  DUF1647   Protein of unknown function (DUF1647)


Domain annotation for each model (and alignments):
>> Sec20  Sec20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0      0.75   6.7e+03      59      74 ..      12      27 ..       2      28 .. 0.70
   2 !   97.6   0.9   3.3e-32   2.9e-28       2      92 .]     123     213 ..     122     213 .. 0.99

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 0.75
       Sec20 59 vkklerrdktdkllvf 74
                v+ l+r++++  l+++
  EPX73792.1 12 VSELQRAETSQELKLY 27
                6778888888777776 PP

  == domain 2  score: 97.6 bits;  conditional E-value: 3.3e-32
       Sec20   2 qakqiTeslraisqllsqevqqSeenleeldastkslekleeeykqvedvlsrskklvkklerrdktdkllvflalglflacvvyvvkkRi 92 
                 +a+q+T ++r+ + +++q+v++S+ n +el +st  le+l+e+y++vedvl+ skk++++l+ +d++d+ lv++++g+f+++v+y+v+kRi
  EPX73792.1 123 SASQVTTAMRDLHVQMVQAVDMSAANSNELASSTSLLESLQEKYFGVEDVLYASKKIMRSLKFNDQKDYYLVISGFGFFMFVVFYLVWKRI 213
                 789***************************************************************************************8 PP

>> DUF1647  Protein of unknown function (DUF1647)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.3   2.4e-05      0.22      34      97 ..     113     176 ..      83     216 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 2.4e-05
     DUF1647  34 vetleklklleeeeklvdlselikneedvvFvsatsddhlkeakksiksirkyypkkklilysl 97 
                 + t ++++l ++++    +++l+ +  + v +sa++++ l +++++++s+++ y+    +ly  
  EPX73792.1 113 LMTTDDMHLTSASQVTTAMRDLHVQMVQAVDMSAANSNELASSTSLLESLQEKYFGVEDVLYAS 176
                 5678999************************************************999999963 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1188  (0.0662614); expected 358.6 (0.02)
Passed bias filter:                      463  (0.0258241); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.29s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 1559.01
//
Query:       EPX73793.1  [L=400]
Description: hypothetical protein SOCG_03011 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.2e-57  193.8   0.0    7.7e-57  192.6   0.0    1.6  1  Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
    2.5e-06   26.9   0.0    4.2e-06   26.2   0.0    1.4  1  Aminotran_1_2    Aminotransferase class I and II
  ------ inclusion threshold ------
      0.045   12.7   0.0      0.075   12.0   0.0    1.3  1  Aminotran_5      Aminotransferase class-V


Domain annotation for each model (and alignments):
>> Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  192.6   0.0   1.3e-60   7.7e-57       4     381 ..      21     395 ..      18     396 .. 0.85

  Alignments for each domain:
  == domain 1  score: 192.6 bits;  conditional E-value: 1.3e-60
                      HHHTTTTCHTTTTBSS--B---SBBBESSHHHH.....CTTCSSS-SBTTT--HHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHTTS-TTE CS
  Cys_Met_Meta_PP   4 lvhagqekdeqtgavavpiyltstykfkdvdea.....fageekgyeYsRsgnptrsvleeriaaLeggeaalavssGmaAiaaailallkaGd 92 
                      ++ha+      ++ v ++++l++ty +  ++e+     + gee+   Y R+   + +  e++++ + ++ + +++ sG+aAi  ++la l+  +
       EPX73793.1  21 VLHADDPLA-LENDVGPALHLSTTYSYPGTAETlqpyqSVGEESFPYYVRIAGNNCDRAEAALSSVLKAPS-VLYGSGLAAI-YSLLAYLNPKN 111
                      555555543.5788999***********99998999876666666789****9999*********999875.6799******.88888888766 PP

                      EEEEESTS..SHHHHHHHHHTHHHTTCEEEEESTTSHHHHHHHCCTTEEEEEEESS-TTTT----HHHHHHHHHHTT-EEEEEGTTTHTTTS-G CS
  Cys_Met_Meta_PP  93 eivvsddl..YggtqrllkkvlkklgievkfvdtsdleelekaikentklvylEtptnpllkvvDiekiaklakkagvlvvvDntfaspllqrp 184
                        + +     Y+gt  ++k++ + +g++++++d  + ee++     + ++++lE+p npl  v Di+   +la+k+g+++vvD tfa p +q +
       EPX73793.1 112 IAIHKPGFggYSGTVGVIKRINRLTGLRTSYIDE-KCEEIH-----EGDVIWLESPMNPLGIVFDIRYYKELAQKKGAVLVVDSTFAPPPIQDA 199
                      6666654344999********************8.445554.....579********************************************* PP

                      GGGT-SEEEEETTTTTTCSSS--EEEEEESSCHHHHHHHHHHHHHHT-B--HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTS...T.... CS
  Cys_Met_Meta_PP 185 lklgaDivvhSaTKylgGhsdvvaGvivvkgkeelkkelkflqnalGavlspfdawlllrGlkTLslRlerhqenAlkvAefLekh...p.... 271
                      l+lgaD vvhS TKylgGh+dv+aG+ ++ + ++  ++lk     lG++l p++++lllr l+T  lR+ +h+en   vA++L+k    p    
       EPX73793.1 200 LALGADYVVHSVTKYLGGHTDVLAGATASYN-KSAIQTLKGDRAYLGSILHPQQCYLLLRSLRTYPLRIAKHSENGYLVANHLNKLatdPefaa 292
                      ****************************999.555566899999***************************************99755536666 PP

                      .......TEEEEE-TTSTTSTTHHHHHHHSSSG-S.EEEEEESSHHHHHHHHHHC-SSSEECSS-SSSS-EEEETTTTTTTTSCHHHHHHTTS- CS
  Cys_Met_Meta_PP 272 .......kvekvyYpglpshpqhelakkqlkgagg.vlsFelkseeekakkfvdnlklfslaeslGgveslielpasmthasipkeereaagvt 357
                              + +vy+ +l++    e++ k+l+g+ +  +sF +kse + a++++  l+ f +a+slGgveslie   + t          +  + 
       EPX73793.1 293 kngiekgLILEVYHNSLQK---EEFVSKNLTGGHSsCFSFLVKSE-KVARHVCCDLRYFHHATSLGGVESLIEWRKM-T----------DPHID 371
                      6666555778888887765...46777777766555********9.789***********************97533.3..........44566 PP

                      TTEEEEE--SS-HHHHHHHHHHHH CS
  Cys_Met_Meta_PP 358 ddliRlsvGiEdvdDliaDlkqal 381
                       +liR+s+GiEd++Dli+Dl++ l
       EPX73793.1 372 SRLIRISIGIEDANDLIKDLNRVL 395
                      78******************9876 PP

>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   0.0   7.1e-10   4.2e-06      67     191 ..      88     192 ..      75     227 .. 0.82

  Alignments for each domain:
  == domain 1  score: 26.2 bits;  conditional E-value: 7.1e-10
                    GGEGEEEESHHHHHHHHHHHHHHHTTT-EEEEEESS-THHHHHHHHTTSEEEEEEBEETTTTEE-HHHHHHHHTTHHCTTETEEEEEEESS-TTT- CS
  Aminotran_1_2  67 reaavvvgsGagaliealifllklnpgdeilvpdptyasyknilrlsggevvryplyseedfhldlealeealkeapegnkktkvilvesphNPtG 162
                    +  +v++gsG  a+ ++l+ l    p+ +i +++p ++ y+  +      + r++       +l    ++e+ +e +eg++    i++esp NP G
     EPX73793.1  88 AP-SVLYGSGLAAIYSLLAYLN---PK-NIAIHKPGFGGYSGTVG----VIKRIN----RLTGLRTSYIDEKCEEIHEGDV----IWLESPMNPLG 166
                    55.7889999887666665555...55.89999999999987763....344444....2348889999999999998877....*********** PP

                    -B--HHHHHHHHHHHHHTTEEEEEEETTT CS
  Aminotran_1_2 163 tvatleeleklldlakkynlllfvDeaYa 191
                     v++   +++l   a+k++++l+vD ++a
     EPX73793.1 167 IVFDIRYYKEL---AQKKGAVLVVDSTFA 192
                    ***********...***********9987 PP

>> Aminotran_5  Aminotransferase class-V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   1.3e-05     0.075     146     204 ..     159     216 ..     139     231 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1.3e-05
                  ESBETTTTEB--HHHHHHHHHHTT-EEEEE-TTTTTTS---HHHHTESEEEEETTTTTS CS
  Aminotran_5 146 thvsnvtGtiqpveeigklakkkgalvlvDaaqavghipidvkklgvDflafsghKllg 204
                      n +G+++++   ++la+kkga+++vD++ a + i+ d  +lg+D ++ s  K+lg
   EPX73793.1 159 ESPMNPLGIVFDIRYYKELAQKKGAVLVVDSTFAPPPIQ-DALALGADYVVHSVTKYLG 216
                  5556999***********************998888776.8889*********999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (400 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       364  (0.0203023); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 2823.78
//
Query:       EPX73794.1  [L=589]
Description: phenylalanine-tRNA ligase beta subunit Frs1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      6e-45  153.3   0.0    9.2e-45  152.7   0.0    1.3  1  tRNA_synthFbeta  Phenylalanyl tRNA synthetase beta chain CLM 
    3.6e-30  104.0   0.3      5e-28   97.1   0.1    2.5  2  PhetRS_B1        Phe-tRNA synthetase beta subunit B1 domain
    2.1e-22   79.6   0.0    3.3e-22   79.0   0.0    1.3  1  B3_4             B3/4 domain
    2.2e-15   56.7   0.0    8.4e-14   51.6   0.0    2.4  2  B5               tRNA synthetase B5 domain


Domain annotation for each model (and alignments):
>> tRNA_synthFbeta  Phenylalanyl tRNA synthetase beta chain CLM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.7   0.0   2.1e-48   9.2e-45       2     214 .]     367     585 ..     366     585 .. 0.98

  Alignments for each domain:
  == domain 1  score: 152.7 bits;  conditional E-value: 2.1e-48
  tRNA_synthFbeta   2 pstlPkapttegelnkeqklrrklrdllagaGlnEvitysfvsekeldklleddderkavelanPlsedqsvlRtsLlpglLevlarNlargne 95 
                      + t P  ++t g++ + ++l++ +r++ a aG++Ev+ + ++s++e+ ++l++ d+++a++lanP + +++v+R+sLlpg+L++ ++N+ + ++
       EPX73794.1 367 KHTYPDQSVTYGKPLEVNRLSDIIRHEAALAGWSEVLPFILCSHDENYAWLRKFDDSRAIQLANPKTLEFQVVRSSLLPGILKTTRENRTHALP 460
                      6799***********************************************999**************************************** PP

  tRNA_synthFbeta  96 dvrlFEigkvflkd.seeelpeeerhlaivltgkreeeswsekaravdfydlkgivealleslgiek...........vefepaehpalhpgrs 177
                       +++FE+++v + d ++e+  ++erh++++ +g +            +f++++g++++l+  l+ ++           ++++p+++++++pgr+
       EPX73794.1 461 -IKIFEVSDVAFIDeTQERMTRNERHFCAIQAGLN-----------SGFEQIHGLLDRLMLMLNEKRifnpkesdargYWIVPDDDATFFPGRC 542
                      .*********9999899999***************...........******************9779************************** PP

  tRNA_synthFbeta 178 Aeikvdgk......evGvlGelhpevleafdlkqrvyvfEldl 214
                      A +++++       +vG +G +hp vle+f+l+  ++++Eldl
       EPX73794.1 543 AAVYYRKDpgtaglRVGTFGVVHPLVLEKFELSVAASAVELDL 585
                      *****999999999***************************98 PP

>> PhetRS_B1  Phe-tRNA synthetase beta subunit B1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.1   0.1   1.1e-31     5e-28       1      82 [.       1      79 [.       1      80 [. 0.97
   2 !    4.5   0.0     0.009        40      48      76 ..     328     356 ..     309     362 .. 0.81

  Alignments for each domain:
  == domain 1  score: 97.1 bits;  conditional E-value: 1.1e-31
   PhetRS_B1  1 MPtisvkkeaLfkalgkelteeeledllfefGlElDeiveeeekkkadkkseeviykidipAnryDLLcleglaralkvFlg 82
                MPti+ +ke+L+kalgk++t++e+++l+f+fG+ElDe ++++    + + se+  +ki+i+AnryD+Lc+eg+a+al+vF+ 
  EPX73794.1  1 MPTITCDKEELYKALGKTYTTQEFDELCFKFGIELDEDTTNDP---ERDPSERPALKIEIAANRYDMLCMEGIAQALNVFNH 79
                **************************************99998...78899*****************************86 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.009
   PhetRS_B1  48 dkkseeviykidipAnryDLLcleglara 76 
                  + s+e+++ +d+p  r D+L    +++ 
  EPX73794.1 328 PNPSDEKTILVDVPCTRADILHQCDIMED 356
                 5678899999***********87666655 PP

>> B3_4  B3/4 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.0   0.0   7.4e-26   3.3e-22       2     173 ..     105     265 ..     104     266 .. 0.91

  Alignments for each domain:
  == domain 1  score: 79.0 bits;  conditional E-value: 7.4e-26
                 SSEEEEEEEES--.-----HHHHHHHHHTT-----HHHHHHHHHHHHHT-.....-EEEEEGGGTBTEEE.EEE--TTEEEEBTTS-EEEE-T...... CS
        B3_4   2 cpryaarvlrgvkktapspewlqrrLrragirpinnvVDitNyvmlelgq.....PlhafDldkiqgdiv.vrlakegeklvtldgkerelde...... 88 
                 +p+ aa++lrgvk++                  ++++++++++++++l++     +++++Dl+ki+g+++  +l++e+ ++v+l  ++r +++      
  EPX73794.1 105 RPYCAAAILRGVKFDPIR---------------YQSFIALQDKLHSNLCRqrslvAIGTHDLSKIEGPFTyEALKPEEINFVPLS-QTRSINGtellef 187
                 688899999999986666...............************************************95555556669****9.668887778999* PP

                 ..................TSEEEETEEEEE.EETTTEEBTTTB--TT--EEEEEEEE--HHHHHHHHHHTT---HHHHHHHH---TTTHHHHHHHHHHH CS
        B3_4  89 ..................edlviadsekpv.slagvmggeeskvsedTknvfleaaafdpvsirktarrlglrseaskrfergvdpekleaaldraval 168
                                   +++vi d+++ v sl+++++++ sk+s dT++vf+e++a                          +d++kl++++++++ +
  EPX73794.1 188 ykdskhlgrylhlvanspRYPVILDAKRRVcSLPPIINSDFSKISVDTRDVFIECTA--------------------------TDKTKLDIVINMMTVM 260
                 *********************************************************..........................9999999999999999 PP

                 HHHHH CS
        B3_4 169 lselc 173
                 ++ +c
  EPX73794.1 261 FTCYC 265
                 99988 PP

>> B5  tRNA synthetase B5 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0     0.037   1.7e+02       2      54 ..       5      67 ..       4      72 .. 0.76
   2 !   51.6   0.0   1.9e-17   8.4e-14       2      67 .]     296     363 ..     295     363 .. 0.93

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.037
                EEEHHHHHHHHTS---HHHHHHHHHHTT-E...........EESSTTCEEEE--TT-TT--SH CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..........xxxxxxxxxxxxxxxxxxxxxxx RF
          B5  2 slrvekinkllGidlseeeiikiLkrlgce..........riekdkdlllVtvPswRsDlere 54
                +++ e++ k lG +++++e  ++  + g+e          r+ ++   l++++ + R+D++  
  EPX73794.1  5 TCDKEELYKALGKTYTTQEFDELCFKFGIEldedttndpeRDPSERPALKIEIAANRYDMLCM 67
                6778889999999999****9999999999555555544444444449999999999999765 PP

  == domain 2  score: 51.6 bits;  conditional E-value: 1.9e-17
                 EEEHHHHHHHHTS---HHHHHHHHHHTT-E...EESSTTCEEEE--TT-TT--SHHHHHHHHHHHH-G CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
          B5   2 slrvekinkllGidlseeeiikiLkrlgce..riekdkdlllVtvPswRsDlereeDliEEvaRlyGY 67 
                 +++ +++n+++Gi+l++ee++++L+r+ ++   + +d++++lV vP +R D+++++D++E+  + yG+
  EPX73794.1 296 EAETDYLNQCCGISLPREEVCRLLTRMLLQaqPNPSDEKTILVDVPCTRADILHQCDIMEDLGISYGF 363
                 57889**********************998555678999****************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (589 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       347  (0.0193541); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.45
# Mc/sec: 3959.48
//
Query:       EPX73795.1  [L=197]
Description: 60S ribosomal protein L13/L16 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.4e-11   44.0   0.0    8.8e-10   38.9   0.0    2.4  1  Ribosomal_L13  Ribosomal protein L13


Domain annotation for each model (and alignments):
>> Ribosomal_L13  Ribosomal protein L13
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.9   0.0   4.9e-14   8.8e-10       3     123 ..       8     117 ..       6     119 .. 0.86

  Alignments for each domain:
  == domain 1  score: 38.9 bits;  conditional E-value: 4.9e-14
                    EEEEETTSBHHHHHHHHHHHHHTTTSTT--TTS--S-EEEEEEGGCBB-SSTHHTT-EEEEE-SSTTSEEEEEHHHHHCCSHHHHHHHHHHCCS-S CS
  Ribosomal_L13   3 yviDAegqvlgrlaskiakvLrGkhkptytphvdcGdyvvvinaekvaltgkkleqkvyyrhtgypgglkevtakellekkpeeilekaVkgmLpk 98 
                    +viDA+g+ lgrlas +ak L G +k            vvv+ +e+++++g+  ++k  y    +     + t   ++ + p++i++kaV+gmLp+
     EPX73795.1   8 VVIDAKGHLLGRLASVVAKQLLGGQK------------VVVVRCEELNISGSFFRNKLKYLAYLRKTCRYNPTRGAFHFRAPSRIFQKAVRGMLPH 91 
                    79*********************665............9************888888777666666666777778899*****************8 PP

                    SH.HHHHHGCTEEEESSSTTSGGGGS CS
  Ribosomal_L13  99 nk.lgrrrlkrLkvyageehpheaqk 123
                    ++  g++ l++L+  +g   p ++qk
     EPX73795.1  92 KSpRGQAALEHLQAVEGVPPPFDKQK 117
                    763778888*******9999988887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       715  (0.0398795); expected 358.6 (0.02)
Passed bias filter:                      507  (0.0282782); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1413.25
//
Query:       EPX73796.1  [L=460]
Description: translation elongation factor EF-1 alpha Ef1a-c [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.1e-54  183.5   0.0    5.4e-54  182.7   0.0    1.4  1  GTP_EFTU     Elongation factor Tu GTP binding domain
    1.4e-40  138.1   0.0    2.8e-40  137.1   0.0    1.5  1  GTP_EFTU_D3  Elongation factor Tu C-terminal domain
      2e-13   50.5   2.0    2.7e-13   50.1   0.7    2.0  2  GTP_EFTU_D2  Elongation factor Tu domain 2
     0.0016   18.5   0.1      0.043   13.9   0.1    2.4  1  MMR_HSR1     50S ribosome-binding GTPase
  ------ inclusion threshold ------
      0.041   13.8   0.3       0.15   12.0   0.3    1.9  1  GTP_EFTU_D4  Elongation factor Tu domain 4


Domain annotation for each model (and alignments):
>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  182.7   0.0   1.5e-57   5.4e-54       3     190 ..       7     232 ..       5     236 .. 0.93

  Alignments for each domain:
  == domain 1  score: 182.7 bits;  conditional E-value: 1.5e-57
                 EEEEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHH.HHHST............HCHSHHHHHHTSCSSCEEEEEETTCSSEEEEEEEESSSGGGHHHHH CS
    GTP_EFTU   3 irnigiighvDhGKtTLtdrLlyktgaiskkgeka.eeerv............lDtlkeErergiTiksaaisleketkkylinliDtPGHvdFskevi 88 
                 ++ni++ighvD+GK+T+t++L+yk+g i+k++ ++ e+e++            lD+lk+ErergiTi++a +++e  t ky +++iD+PGH+dF+k++i
  EPX73796.1   7 HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKfEKEATelgkgsfkyawvLDKLKAERERGITIDIALWKFE--TPKYYVTVIDAPGHRDFIKNMI 103
                 99*********************************644555799*******************************..********************** PP

                 HHHHT-SEEEEEEETTTB.......STHHHHHHHHHHHHTTTE.EEEEEESCGST...HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEBTT CS
    GTP_EFTU  89 rglrvlDgavlvvdaveG.......vepqteevlrlalkegvp.iivfiNKmDrl...kaelkeiveevkqklsrkeeklekygekgekevpvvfgSal 176
                 +g++++D+a+l++    G          qt+e++ la ++gv+ +iv++NKmD +   +a+++ei++e + ++      ++k+g++ + +vp+v++S++
  EPX73796.1 104 TGTSQADCAILIIGGGTGefeagisKDGQTREHALLAYTLGVKqLIVAVNKMDSVqysQARFEEIIKETS-NF------VKKVGFNPK-TVPFVPVSGF 194
                 ****************9999999999*******************************9***********9.88......89*****96.********** PP

                 TTBTHH........................HHHHHHHH CS
    GTP_EFTU 177 kgegvk........................tllealve 190
                 +g+++                         tllea++ 
  EPX73796.1 195 QGDNMIepttnmtwyqgwqkeskagvvkgkTLLEAIDA 232
                 ***88777777778888888888888888888888876 PP

>> GTP_EFTU_D3  Elongation factor Tu C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.1   0.0   7.8e-44   2.8e-40       4     111 ..     334     439 ..     331     440 .. 0.98

  Alignments for each domain:
  == domain 1  score: 137.1 bits;  conditional E-value: 7.8e-44
                  EECCEEEEEEESSS..SS-BSTT-EEEEESSS-EEEEEEEEEEECCSSTTSB-BSS-SSCCSTT-CEEEEEEECCEEEE--TTTHCCCCEEEEECTTC CS
  GTP_EFTU_D3   4 phtkfeAqvyilekerhtpitagYrpvlyirtadvtgkvveLlskldkktekvsekkpefvkpGdnvivevelikpialekgseypqlGrFaiReggr 101
                   +++f+Aqv+il++  +++i agY+pvl+++t+++++++ eL++k+d++t+k+ e+ p+fvk+Gd++i+++ ++kp+++e +++y +lGrFa+R++++
   EPX73796.1 334 GCANFTAQVIILNH--PGQISAGYSPVLDCHTSHIACRFNELIEKIDRRTGKKIEEAPKFVKSGDACIAQMIPTKPMCVEAFTDYAPLGRFAVRDMRQ 429
                  5889**********..********************************************************************************** PP

                  EEEEEEEEEE CS
  GTP_EFTU_D3 102 TvaaGvvtei 111
                  Tva+Gv++ +
   EPX73796.1 430 TVAVGVIKAV 439
                  *******988 PP

>> GTP_EFTU_D2  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       3.7   1.3e+04      19      35 ..      10      24 ..       9      32 .. 0.71
   2 !   50.1   0.7   7.6e-17   2.7e-13       1      72 [.     258     323 ..     258     325 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 3.7
                 EEEEC.TCTTSEEEEEEE CS
  GTP_EFTU_D2 19 vrilg.ndtskkeivtri 35
                 ++++g +d++k+   t+ 
   EPX73796.1 10 IVVIGhVDSGKS---TTT 24
                 566677888888...665 PP

  == domain 2  score: 50.1 bits;  conditional E-value: 7.6e-17
                  EEEEEEEEEESEEETTEEEEEECTCTTSEEEEEEEEEEEEETEEESEEETTSEEEEEEEESSCCSGSSTTCE CS
  GTP_EFTU_D2   1 GtvalgrvysGtlkkGdevrilgndtskkeivtrissletfhededeavaganaGvivaikgledaiivGdt 72 
                  Gtv  grv++G +k+G+ v +   +++ +   t+++s+e++he +d   +g+n+G++v+ + ++d i++G++
   EPX73796.1 258 GTVPVGRVETGAIKPGMVVTF--APSGVT---TEVKSVEMHHESLDAGLPGDNVGFNVKNVSVKD-IRRGNV 323
                  99*******************..666566...*********************************.****98 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.1   1.2e-05     0.043       2      83 ..      10     116 ..       9     180 .. 0.64

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.2e-05
                 EEEEESTTSSHHHHHHHHH...............T................STEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHHHHHHH CS
    MMR_HSR1   2 vaivGrpNvGKStLinalt...............g................ekaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseekglgka 69 
                 ++++G+  +GKSt    l+               +                +k +++++ g T+di   ++++ +  ++++D pG          +++ 
  EPX73796.1  10 IVVIGHVDSGKSTTTGHLIykcggidkrtiekfeKeatelgkgsfkyawvlDKLKAERERGITIDIALWKFETPKYYVTVIDAPGH-R-----DFIKNM 102
                 78999999999999999986666555555554440444555556656555468899999999999999999977889********3.1.....123333 PP

                 HHHHHCTSEEEEEE CS
    MMR_HSR1  70 flaleeadlillvv 83 
                 +    +ad ++l++
  EPX73796.1 103 ITGTSQADCAILII 116
                 33333445555444 PP

>> GTP_EFTU_D4  Elongation factor Tu domain 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.3   4.1e-05      0.15      21      81 ..     262     320 ..     257     324 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 4.1e-05
                  EEEEEEEEEEETT-EEEETTE.EEEEEEEEEETTEEESEEETT-EEEEEEESS-TTTS--T CS
  GTP_EFTU_D4  21 vGvevlgGvikpgvklikedGrevGeilqiqdkgkkleeakaGqevaisiegkivGrqike 81 
                  vG +v +G ikpg+ +  +      e+++++ ++++l+    G++v+  +++    ++i  
   EPX73796.1 262 VG-RVETGAIKPGMVVTFAPSGVTTEVKSVEMHHESLDAGLPGDNVGFNVKNVS-VKDIRR 320
                  88.9**********99765555788**********************9999754.355555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (460 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       491  (0.0273858); expected 358.6 (0.02)
Passed bias filter:                      429  (0.0239277); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.40
# Mc/sec: 3425.75
//
Query:       EPX73797.1  [L=125]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.4e-16   57.6   0.0    1.1e-15   57.2   0.0    1.2  1  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
     0.0028   17.7   0.0     0.0036   17.3   0.0    1.2  1  RRM_3     RNA binding motif


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.2   0.0   1.2e-19   1.1e-15       1      59 [.      16      75 ..      16      84 .. 0.95

  Alignments for each domain:
  == domain 1  score: 57.2 bits;  conditional E-value: 1.2e-19
                EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHH CS
       RRM_1  1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAleal 59
                ++V++L+p+++ee+L++lF +fGp+k++ l  d +tg  kg+a +e+++ e+Ae+A+++ 
  EPX73797.1 16 IIVTGLHPETSEEQLEDLFADFGPVKNLHLNLDrRTGYVKGYALIEYAKLEQAEDAVRQT 75
                78*******************************************************965 PP

>> RRM_3  RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0     4e-07    0.0036       1      43 [.      13      55 ..      13      92 .. 0.76

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 4e-07
                --EEEEEE-SSS--HHHHHHHCHCCS-ECEEEE-TTSSEEEEE CS
       RRM_3  1 GvilklsGlnkelsredikellsklgevayvdyekgdkegevr 43
                G i+ ++Gl+ e+s e++ +l++ +g+v+   ++ +  +g+v+
  EPX73797.1 13 GYIIIVTGLHPETSEEQLEDLFADFGPVKNLHLNLDRRTGYVK 55
                889***********************************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       397  (0.0221429); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 973.01
//
Query:       EPX73798.1  [L=244]
Description: ubiquitin-protein ligase E3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    0.00015   21.8   4.5    0.00015   21.8   4.5    2.3  2  zf-C3HC4_4    zinc finger of C3HC4-type, RING
     0.0002   21.3   2.8     0.0002   21.3   2.8    2.2  2  zf-RING_UBOX  RING-type zinc-finger
    0.00028   20.7  10.6     0.0005   19.9  10.6    1.4  1  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
    0.00064   19.5  12.0     0.0008   19.2   4.9    2.9  3  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
    0.00072   19.5  10.4     0.0012   18.8   8.8    2.1  2  zf-RING_5     zinc-RING finger domain
     0.0017   18.6   8.1     0.0045   17.3   8.1    1.8  1  zf-RING_2     Ring finger domain
     0.0038   17.0   8.5     0.0099   15.7   8.4    1.7  1  Prok-RING_4   Prokaryotic RING finger family 4
  ------ inclusion threshold ------
      0.028   14.3  12.5      0.061   13.2  10.6    2.4  2  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
       0.56   10.4   8.0       0.55   10.4   6.6    1.7  2  zf-RING_10    zinc RING finger of MSL2


Domain annotation for each model (and alignments):
>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.6      0.35     7e+02      14      27 ..     178     191 ..     174     197 .. 0.83
   2 !   21.8   4.5   7.6e-08   0.00015       8      42 .]     198     230 ..     194     230 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.35
  zf-C3HC4_4  14 leCGhsfClsCiss 27 
                 ++C  + C  Ci +
  EPX73798.1 178 IDCRPNECAFCILR 191
                 78999999999965 PP

  == domain 2  score: 21.8 bits;  conditional E-value: 7.6e-08
  zf-C3HC4_4   8 LekPvsleCGhsfClsCisslqkepdgeqllCplC 42 
                 L++P s +C h+fC  C+ s  +     +l+Cp C
  EPX73798.1 198 LTNPYSANCHHTFCYACVMSRKELIV--DLTCPIC 230
                 89****************99877774..59****9 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   2.8     1e-07    0.0002       7      39 .]     197     228 ..     185     228 .. 0.87
   2 ?    2.0   0.4      0.11   2.1e+02       1       6 [.     227     232 ..     227     237 .. 0.84

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 1e-07
  zf-RING_UBOX   7 lftdPlvl.pCGHtFCreClwelskslegafkCP 39 
                   ++t+P    +C+HtFC  C+  ++k l   ++CP
    EPX73798.1 197 TLTNP-YSaNCHHTFCYACV-MSRKELIVDLTCP 228
                   57899.6438**********.799*********9 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.11
  zf-RING_UBOX   1 CpICle 6  
                   CpIC+ 
    EPX73798.1 227 CPICQT 232
                   ****85 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9  10.6   2.5e-07    0.0005       3      49 ..     183     236 ..     181     237 .. 0.81

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 2.5e-07
                 SB-TTTSSSBS-.EEETT.....EEEEEE-HHHHHHHHH..TT-B-TTT--B--E CS
  zf-C3HC4_3   3 eeCviClerprn.vvllp.....CgHlvlCeeCaekllk..rkkkCpiCrrpiek 49 
                 +eC  C  r+++ ++l +     C H+ +C++C+ + ++   + +CpiC+++i++
  EPX73798.1 183 NECAFCILRDEDnATLTNpysanCHHT-FCYACVMSRKEliVDLTCPICQTKIHR 236
                 68999998854424444347777****.*********99**************87 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       2.5     5e+03       4      11 ..      79      86 ..      78      87 .. 0.70
   2 ?    4.0   0.3     0.022        45       7      29 ..     169     191 ..     168     197 .. 0.85
   3 !   19.2   4.9     4e-07    0.0008       8      40 .]     197     230 ..     194     230 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 2.5
  zf-C3HC4_2  4 iCldmlkd 11
                iC+  l+ 
  EPX73798.1 79 ICFRKLER 86
                88888775 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.022
  zf-C3HC4_2   7 dmlkdpsvvtpCgHvfCqkCilr 29 
                  +l++++  + C    C+ Cilr
  EPX73798.1 169 KELQNTTKKIDCRPNECAFCILR 191
                 5799998888***********98 PP

  == domain 3  score: 19.2 bits;  conditional E-value: 4e-07
  zf-C3HC4_2   8 mlkdpsvvtpCgHvfCqkCilr..sLeekneCPlC 40 
                  l +p ++++C H+fC+ C++    L     CP+C
  EPX73798.1 197 TLTNP-YSANCHHTFCYACVMSrkELIVDLTCPIC 230
                 58899.9************98744677777***** PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       1.2   2.4e+03       4      12 ..      79      85 ..      78      94 .. 0.65
   2 !   18.8   8.8   5.8e-07    0.0012      14      44 .]     195     232 ..     179     232 .. 0.78

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 1.2
   zf-RING_5  4 kCfeklske 12
                +Cf+kl  e
  EPX73798.1 79 ICFRKL--E 85
                799999..2 PP

  == domain 2  score: 18.8 bits;  conditional E-value: 5.8e-07
   zf-RING_5  14 k.....fyltsCgHifCekClkkll..ekeavCpiCrk 44 
                 +     +y  +C+H+fC +C++ ++    + +CpiC++
  EPX73798.1 195 NatltnPYSANCHHTFCYACVMSRKelIVDLTCPICQT 232
                 3345569999***************99999******85 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   8.1   2.3e-06    0.0045       1      44 []     183     231 ..     183     235 .. 0.63

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 2.3e-06
   zf-RING_2   1 deCpICleelssadsvlll.p....CgHvfhreClerwlrssst...CPlCr 44 
                 +eC+ C   l ++d+++l+ p    C H+f++ C++   ++ +    CP+C+
  EPX73798.1 183 NECAFCI--LRDEDNATLTnPysanCHHTFCYACVMS-RKELIVdltCPICQ 231
                 69****6..4444443322123344*999*****966.233333566****5 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   8.4     5e-06    0.0099      11      42 ..     201     236 ..     185     239 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 5e-06
  Prok-RING_4  11 ailepCgHlvCkeCfdskdls....sCPlCqrrisk 42 
                  +  + C H +C +C  s +      +CP+Cq++i +
   EPX73798.1 201 PYSANCHHTFCYACVMSRKELivdlTCPICQTKIHR 236
                  45568**********9997767899********965 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.4      0.21   4.2e+02      13      27 ..     176     190 ..     168     197 .. 0.75
   2 ?   13.2  10.6   3.1e-05     0.061       1      41 []     185     230 ..     185     230 .. 0.80

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.21
                 .E-TTS--B-CHHHH CS
    zf-C3HC4  13 elleCkHsfCskCir 27 
                 + ++C+ + C  Ci+
  EPX73798.1 176 KKIDCRPNECAFCIL 190
                 467888888999986 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 3.1e-05
                 -TTT-S--SS-E......E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepn.....elleCkHsfCskCirkilksrkkvkCPlC 41 
                 C+ C    +++       + +C+H+fC++C+ +  +     +CP+C
  EPX73798.1 185 CAFCILRDEDNAtltnpYSANCHHTFCYACVMSRKELIVDLTCPIC 230
                 66666666666666666699***********99999878888***9 PP

>> zf-RING_10  zinc RING finger of MSL2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1       2.3   4.6e+03      17      30 ..     176     189 ..     171     199 .. 0.66
   2 ?   10.4   6.6   0.00028      0.55      15      44 ..     200     231 ..     184     239 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 2.3
  zf-RING_10  17 kekeCqHyvCrlCv 30 
                 k+ +C  + C  C+
  EPX73798.1 176 KKIDCRPNECAFCI 189
                 45566666676665 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00028
  zf-RING_10  15 epkekeCqHyvCrlCvgkkkklkp..sCsqCk 44 
                 +p + +C+H  C  Cv  +k+l    +C+ C+
  EPX73798.1 200 NPYSANCHHTFCYACVMSRKELIVdlTCPICQ 231
                 56677***************997533799998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       754  (0.0420548); expected 358.6 (0.02)
Passed bias filter:                      484  (0.0269954); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.49
# Mc/sec: 1504.82
//
Query:       EPX73799.1  [L=112]
Description: 60S ribosomal protein L34 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      5e-42  142.1   0.4    6.9e-42  141.7   0.4    1.2  1  Ribosomal_L34e  Ribosomal protein L34e


Domain annotation for each model (and alignments):
>> Ribosomal_L34e  Ribosomal protein L34e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.7   0.4   3.8e-46   6.9e-42       1      94 []       1      94 [.       1      94 [. 1.00

  Alignments for each domain:
  == domain 1  score: 141.7 bits;  conditional E-value: 3.8e-46
  Ribosomal_L34e  1 MvqrltyrrrlsYntrsnkvrvvktpggklvyqykkkkgkapkCgdckkkLqGipalrpkelsrlsktkktvsRaYGgslcakcvkerivrafl 94
                    M+qr+tyrrrl+Yntrsnk+r++ktpg+kl+y+++kk g+ p+Cgd++  LqGipalrp+e++rls++kktv+RaYGg l+a++vk+rivrafl
      EPX73799.1  1 MAQRVTYRRRLAYNTRSNKTRIIKTPGNKLRYLHIKKLGTIPRCGDTGVPLQGIPALRPREFARLSHNKKTVQRAYGGNLSANAVKDRIVRAFL 94
                    9********************************************************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       436  (0.0243181); expected 358.6 (0.02)
Passed bias filter:                      256  (0.0142785); expected 358.6 (0.02)
Passed Vit filter:                         8  (0.000446204); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.28s 00:00:00.72 Elapsed: 00:00:00.46
# Mc/sec: 729.18
//
Query:       EPX73800.1  [L=489]
Description: CAMK/CAMK1 protein kinase Cmk2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.4e-68  229.5   0.0      7e-68  228.8   0.0    1.3  1  Pkinase         Protein kinase domain
    3.4e-28   98.6   0.0      6e-28   97.8   0.0    1.4  1  Pkinase_Tyr     Protein tyrosine kinase
    0.00021   20.7   1.2       0.26   10.6   0.1    2.7  2  Kinase-like     Kinase-like
  ------ inclusion threshold ------
      0.038   12.8   0.0       0.12   11.1   0.0    1.8  2  Pkinase_fungal  Fungal protein kinase
      0.067   13.1   0.0        5.3    6.9   0.0    2.1  2  APH             Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  228.8   0.0     2e-71     7e-68       1     264 []      59     345 ..      59     345 .. 0.94

  Alignments for each domain:
  == domain 1  score: 228.8 bits;  conditional E-value: 2e-71
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHH CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseee 99 
                 ++ +eklG G+++kVyka++ e +k vAvK+i+k +++ k+++ v +E++il++++h+niv+l++++e +d +ylvle++egge+++ +   + +se+ 
  EPX73800.1  59 FQLKEKLGDGAYSKVYKAYSFELEKDVAVKVIRKYEMNLKQRSGVHKEVNILRRIQHKNIVTLLDFIEADDFFYLVLELAEGGEIFHKIVYFTYFSEQL 157
                 57899*************************************************************************************9999***** PP

                 HHHHHHHHHHHHHHHH.HTTEE-SS-SGGGEEEET................................TTEEEE-SGTTSEESSSSCSBCTTTSCGGGS- CS
     Pkinase 100 akkiakqilegleylH.skgiiHrDlKpeNiLide................................kgelKitDFGlakelessskltsfvgtseYlA 165
                 a++++ qi+ ++++lH   gi+HrD+KpeN+L++                                  g++ i+DFG++k + +++ +++ +gt  Y A
  EPX73800.1 158 ARHVIVQIADAIQHLHdVCGIVHRDIKPENVLFKPipfrptegyqpppldpikrdegvftpgvggggIGKILIGDFGFSKVVWNTK-TSTPCGTVGYAA 255
                 ****************6678**************889****************99999998888777777**************88.************ PP

                 HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 166 PEvlkeneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 PE+++++ ysk+vD+W+lG++l ++l+g ppf +++ k  ++k          + ge ++ +p++++ise+akdl+  ll++dp++R+ +++  qhp++
  EPX73800.1 256 PEIVNDELYSKNVDMWALGCLLHTMLCGFPPFFDDNVKLLASK---------VVKGEFEFLSPWWDNISESAKDLVAHLLTVDPRERYDIHQFFQHPWI 345
                 *********************************4444432222.........3445999***************************************7 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.8   0.0   1.7e-31     6e-28       2     254 ..      60     338 ..      59     342 .. 0.87

  Alignments for each domain:
  == domain 1  score: 97.8 bits;  conditional E-value: 1.7e-31
                  EEEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEE.STTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTT CS
  Pkinase_Tyr   2 elgkklGeGafGkVvegtlkgekekkevkVavKtl.keeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkeke 98 
                  +l++klG Ga++kV++++      + e +VavK++ k e++ ++++ + +e++i+++++h+niv ll ++  ++  ++v+e+++gG++ + +     +
   EPX73800.1  60 QLKEKLGDGAYSKVYKAYSF----ELEKDVAVKVIrKYEMNLKQRSGVHKEVNILRRIQHKNIVTLLDFIEADDFFYLVLELAEGGEIFHKIVYF--T 151
                  789****************9....8899*******444666677889999**************************************9999987..7 PP

                  TSBHHHHHHHHHHHHHHHHHHHHTT.EEEST-SGGGEEEEE................................TTEEEE-STTTHEETTTSSEEEETT CS
  Pkinase_Tyr  99 kltlkdllsfalqvAkGmeyLeskk.lvHrdlaarNvLlse................................nkvvkisDfGLardiekddeyvkke 163
                   ++ +   ++++q+A+++++L++   +vHrd+   NvL +                                   ++ i+DfG ++ +      +k++
   EPX73800.1 152 YFSEQLARHVIVQIADAIQHLHDVCgIVHRDIKPENVLFKPipfrptegyqpppldpikrdegvftpgvggggIGKILIGDFGFSKVV----WNTKTS 245
                  889999999*************97549*************999***************************98878999**********....444555 PP

                  SSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHH.HTTEES-BB..TTSBHHHHHHHHHHT-SSGGGS--HHH CS
  Pkinase_Tyr 164 eaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglkneevlekl.kegkrlekp..ekcpeelyelmkkcweedpeeRptfse 254
                  +    v + apE+++++ ++++ D+W+ G ll+ +++ g  p+ + + + +++k+ k + +   p  ++++e+ ++l+ + ++ dp+eR ++++
   EPX73800.1 246 TPCGTVGYAAPEIVNDELYSKNVDMWALGCLLHTMLC-GFPPFFDDNVKLLASKVvKGEFEFLSPwwDNISESAKDLVAHLLTVDPRERYDIHQ 338
                  566789****************************999.99999988777777777344445444433788888899999999999999887776 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.1   7.2e-05      0.26     140     179 ..     153     192 ..     131     194 .. 0.84
   2 !    8.0   0.0   0.00045       1.6     205     288 .]     251     333 ..     226     333 .. 0.68

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 7.2e-05
  Kinase-like 140 kletiarlllTlqlirlaanLqa.kglvhgkftvdnlllde 179
                    e++ar+++ +q+   +++L++  g+vh +++++n+l+++
   EPX73800.1 153 FSEQLARHVI-VQIADAIQHLHDvCGIVHRDIKPENVLFKP 192
                  45789*****.**********9845*************986 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.00045
  Kinase-like 205 kgfaPpEllgsrggytrknktkmthkldaWqlGlviyriwclklPlt......lateeakeewkfklck..kipekvkaLlkkfLqlsqedR 288
                  +g+a pE+++            ++ ++d W+lG     + c   P+       la + +k e++f      +i+e  k L++++L ++ ++R
   EPX73800.1 251 VGYAAPEIVND---------ELYSKNVDMWALGCLLHTMLCGFPPFFddnvklLASKVVKGEFEFLSPWwdNISESAKDLVAHLLTVDPRER 333
                  55666666555.........578999****************99985111111233456677777654335999999999999999988877 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.44   1.6e+03     185     202 ..     104     121 ..      71     129 .. 0.68
   2 ?   11.1   0.0   3.4e-05      0.12     312     341 ..     165     191 ..     154     248 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.44
  Pkinase_fungal 185 ksEaelLkkaeergvegv 202
                     ++E+++L++++++++  +
      EPX73800.1 104 HKEVNILRRIQHKNIVTL 121
                     489999999988877655 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 3.4e-05
  Pkinase_fungal 312 lrDaIkghrsLflkagiLHrDiSenNilit 341
                     ++DaI   + L+  +gi+HrDi  +N+l+ 
      EPX73800.1 165 IADAI---QHLHDVCGIVHRDIKPENVLFK 191
                     44555...6788889************986 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0    0.0096        34       7     108 ..      67     175 ..      63     177 .. 0.77
   2 ?    6.9   0.0    0.0015       5.3     168     181 ..     178     191 ..     176     200 .. 0.86

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.0096
                 -.SSCEEEEEEETT..--EEEEEE-TT....S-HHHHHHHHHHHHHHHHTT-B--B-CTTBS-EEETTEEEEEEE----EE-SS.....HHHHHHHHHH CS
         APH   7 ggasnrtylvttpa..gryvlrrnppa....raaeeirrevallrlLakagvpvPevlagdtddeeigllfalieyvpgrsllr.....klsaaqlpel 94 
                 +ga++++y+  + +  ++++++++++     +    +++ev +lr ++  ++    +l++ + d++ +l+ +l e+  g++++      + s++ ++++
  EPX73800.1  67 DGAYSKVYKAYSFEleKDVAVKVIRKYemnlKQRSGVHKEVNILRRIQHKNI--VTLLDFIEADDFFYLVLELAEG--GEIFHKivyftYFSEQLARHV 161
                 5555555555554442366666655555444456678899999999988877..48999999*************9..99999999***999******* PP

                 HHHHHHHHCCHHCH CS
         APH  95 lealgeflaalhqv 108
                 + ++++++ +lh+v
  EPX73800.1 162 IVQIADAIQHLHDV 175
                 ************98 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0015
                 EE-SS-SGGGEEEC CS
         APH 168 llHgDlhpgNllvd 181
                 ++H+D++p N+l++
  EPX73800.1 178 IVHRDIKPENVLFK 191
                 89***********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (489 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       623  (0.0347482); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.62u 0.32s 00:00:00.94 Elapsed: 00:00:00.51
# Mc/sec: 2912.12
//
Query:       EPX73801.1  [L=94]
Description: serine palmitoyl transferase A subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.3e-13   49.0   2.1    3.3e-13   49.0   2.1    1.8  2  SPT_ssu-like  Small subunit of serine palmitoyltransferase-li
  ------ inclusion threshold ------
       0.02   15.3   0.1      0.023   15.1   0.1    1.3  1  Tmemb_18A     Transmembrane protein 188
      0.062   13.3   2.6       0.08   13.0   2.6    1.0  1  MARVEL        Membrane-associating domain


Domain annotation for each model (and alignments):
>> SPT_ssu-like  Small subunit of serine palmitoyltransferase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.0   2.1   5.5e-17   3.3e-13       1      43 [.      22      64 ..      22      73 .. 0.95
   2 ?   -0.4   0.1      0.15     9e+02      41      49 ..      76      84 ..      74      92 .. 0.55

  Alignments for each domain:
  == domain 1  score: 49.0 bits;  conditional E-value: 5.5e-17
  SPT_ssu-like  1 knwlsrkiylyevtfglYMLepwEkflfnilifillsllliaa 43
                  +nwl++++y+y+vt g Y+++  E f+fn+++++ll+l+ +a+
    EPX73801.1 22 MNWLRLQYYRYQVTLGPYVFTSHEAFVFNTIVLLLLFLIGWAV 64
                  9**************************************9986 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.15
  SPT_ssu-like 41 iaaslYlps 49
                  ++ +lY p 
    EPX73801.1 76 WNLVLYIPA 84
                  555555553 PP

>> Tmemb_18A  Transmembrane protein 188
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   0.1   3.9e-06     0.023      51      84 ..      31      65 ..      18      87 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 3.9e-06
   Tmemb_18A 51 tsevsllksLls.hlvftisvivlilLfllGvhkr 84
                 ++v+l   +++ h++f++++ivl+lLfl+G   +
  EPX73801.1 31 RYQVTLGPYVFTsHEAFVFNTIVLLLLFLIGWAVK 65
                5666676655555*****************96543 PP

>> MARVEL  Membrane-associating domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   2.6   1.3e-05      0.08      34      92 ..      28      90 ..      20      90 .. 0.94

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.3e-05
      MARVEL 34 llgspssalnfavfvavfsfly.alfllvlylfk...nsaftsilwplidlivdalaallwlv 92
                ++++++ +l+ +vf++  +f++ +++ll+l l+    +s + +  +pl  l+++  a++l+lv
  EPX73801.1 28 QYYRYQVTLGPYVFTSHEAFVFnTIVLLLLFLIGwavKSIVVKLTPPLWNLVLYIPATVLYLV 90
                5789999***********************9999***************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       657  (0.0366445); expected 358.6 (0.02)
Passed bias filter:                      315  (0.0175693); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 706.37
//
Query:       EPX73802.1  [L=795]
Description: alpha mannosidase-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     3e-113  379.1   0.1   4.1e-113  378.7   0.1    1.2  1  Glyco_hydro_47  Glycosyl hydrolase family 47


Domain annotation for each model (and alignments):
>> Glyco_hydro_47  Glycosyl hydrolase family 47
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  378.7   0.1  2.3e-117  4.1e-113       2     457 ..      41     474 ..      40     475 .. 0.93

  Alignments for each domain:
  == domain 1  score: 378.7 bits;  conditional E-value: 2.3e-117
                     HHHHHHHHHHHCTTSSEEETTTTEE.............E-SS.SS-CCHHHHHHHHHHCCHHHHHHHHHHHHHHC----S.SS.EEEHHHHHHHH CS
  Glyco_hydro_47   2 fkhswegYkkyAwghDelrPlskkg.............rdtfgglgatlvDsLdtllimglkeefeeaveavekkidfdtsdskevsvFEttIRy 83 
                     f+h++++Y + A++ Del Pls+kg             +d+ g++ +tl+D++dtl++++ +e f+eav+ v ++++f+t d+ +v++FE tIR+
      EPX73802.1  41 FYHGYSNYLDLAFPLDELAPLSCKGlgpdfkdshnlgvNDVRGNYLLTLIDTIDTLVVLNDTEGFHEAVRKVIQHLTFET-DT-KVQLFEATIRI 133
                     99*****************************************************************************5.55.79********* PP

                     HHHHHHHHHHH..........S-HHHHHHHHHHHHHHHHGGGSSTTS---SEEETTT--EE-.STCGCEEEHHHHCSSHHHHHHHHHHHT-CHHH CS
  Glyco_hydro_47  84 LGGLlsaydls.........ekkedvllekAveladrLlpAFdtpsglpvarvnlkkrkaskkerassesvlAelgslslEftrLsqlTgdkkYe 169
                     LGGLls + ++          ++++ ll+ A+el++rLl AF+tp+++p+ar+nl   k+++ +++++es++A ++sl+lEf+ Ls l+g++++ 
      EPX73802.1 134 LGGLLSGHVFAsdpqygfqlPGYNNELLTLATELGERLLIAFRTPTKIPFARINL--MKGVS-SKETNESCSAGASSLVLEFSMLSILSGNPEFR 225
                     **********9999999999899999*****************************..44333.344447899*********************** PP

                     HHHHCCHHHHHCHCC.HHHTTB-BSEEETTT--EESTEE-SSTTTHHHHHHHHHHHHHCTS--HHHHHHHHHHHHHHHHH.TEEE-TTT..--EE CS
  Glyco_hydro_47 170 dlaervtkaleelqektklpglvpikidastgkfvaekislgargDSyYEYllKqylllggeeeqyrkmyeealdaikkhllfrpskkkeddllf 264
                     ++ae+++ a+++  +  +  gl++++id+++g++     ++ga++DS+YEY++K+y+ll+  +  + +++ee+l +i++++ ++   ++     +
      EPX73802.1 226 KAAENAFFAIWN--R-RSSIGLLGNSIDVMSGNWIYPVSGIGAGIDSFYEYAFKSYILLD--DIRFLQVWEESLSNIRQYMSST---ED----YY 308
                     ************..3.3489***************99***********************..668***************5555...23....56 PP

                     E-EECTTCTS.EE-EEEGGGGHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHTSTTS---SEEEE-SS.....S-ECTSSSSEEE-.GGG-- CS
  Glyco_hydro_47 265 vgevtsteegklspeidhLscFlgGllalgakllekeedlelAkkltegcvkayeatktglmPEifevkpcesaeecewneekkdealkriedrk 359
                      ++v+++++++ ++++d+L ++++Gll+l+       ++le Akk +  +  +y ++  g +PE+f+++++                  +ie + 
      EPX73802.1 309 YQNVYASSGTTATYWVDSLGAYFPGLLVLA-------GELESAKKSHLYYFSIYMKY--GQIPERFNFHTK------------------TIELQG 376
                     66666777889*******************.......9****************999..*********931..................245779 PP

                     B----HHHHHHHHHHHHH--THHHHHHHHHHHHHHHHCEETTEE--ECETTSSS-EE-S-B-HHHHHTHHHHHHHHC-S-TTT-..TTTEEE-TT CS
  Glyco_hydro_47 360 yllRPEaiESlfylYritgdekyrevgwemfealekatktesgysaledVtkeepekeDemeSFwlaEtlKYlYLlFsdedvls..ldeyVfnTe 452
                     y+lRPE+ ES++ylYr+t+d+ y+evg+ +++++ek+ +t++g+++l++ +  ++ ++D+meSF+l+EtlKYlYLlF++++ ++   +++ f+Te
      EPX73802.1 377 YPLRPEFAESTYYLYRATKDPFYLEVGKIILKNIEKNLRTSCGFASLDNLQ--TGVRSDRMESFFLSETLKYLYLLFDESNIFHskFQDFLFTTE 469
                     ***************************************************..9****************************88889******** PP

                     S-EEE CS
  Glyco_hydro_47 453 AHplk 457
                     +H l+
      EPX73802.1 470 GHLLP 474
                     ***98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (795 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       458  (0.0255452); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.77u 0.31s 00:00:01.08 Elapsed: 00:00:00.54
# Mc/sec: 4397.60
//
Query:       EPX73803.1  [L=188]
Description: adenine phosphoribosyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.1e-15   56.6   0.0    2.7e-15   56.2   0.0    1.1  1  Pribosyltran  Phosphoribosyl transferase domain
  ------ inclusion threshold ------
      0.012   15.1   0.0      0.017   14.6   0.0    1.2  1  UPRTase       Uracil phosphoribosyltransferase


Domain annotation for each model (and alignments):
>> Pribosyltran  Phosphoribosyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.2   0.0     3e-19   2.7e-15       6     110 ..      33     142 ..      31     180 .. 0.89

  Alignments for each domain:
  == domain 1  score: 56.2 bits;  conditional E-value: 3e-19
                   TT---EEEEEEETTEEEEEE--GGGEEEEEEETTTHHHHHHHHHHSTT-EE-EEEEEE-TTT--EE...............EE----TTSEEEEE-S CS
  Pribosyltran   6 lenpaildavarlaaeileeyngkpdvvvgiargGvpfakiladeLevplayvrkvkyrpdgseeaargssdes.......rlledpagkkVliVDD 95 
                   ++ p+++ +  +l+ e++++ + ++dv+vg + +G+ f++ la +L++ ++ vrk  + p++  +++  +++e        ++++++  ++VliVDD
    EPX73803.1  33 FSDPKAFGILVDLLVELIQKQFKEIDVIVGLEARGFLFGPTLALRLNAGFVPVRKPNKLPGDLATIT--FKKEYaedafamQKSSIKPSQRVLIVDD 127
                   667888888889999***********************************************99996..7777789********************* PP

                   EESSSHHHHHHHHHH CS
  Pribosyltran  96 ildtGgTllaalelL 110
                   il+tGgT laa el+
    EPX73803.1 128 ILATGGTALAADELI 142
                   *******99987766 PP

>> UPRTase  Uracil phosphoribosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   1.8e-06     0.017     119     147 ..     116     145 ..      77     158 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1.8e-06
     UPRTase 119 i.aertvlllDpviaTGgsaaaaiqlLker 147
                 i  +++vl++D ++aTGg+a aa +l+ + 
  EPX73803.1 116 IkPSQRVLIVDDILATGGTALAADELIMQL 145
                 234566***************998887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (188 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       287  (0.0160076); expected 358.6 (0.02)
Passed bias filter:                      279  (0.0155614); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.44
# Mc/sec: 1285.42
//
Query:       EPX73804.1  [L=430]
Description: phosphoprotein phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.5e-13   51.7   0.3    2.1e-13   51.2   0.3    1.2  1  Metallophos    Calcineurin-like phosphoesterase
  ------ inclusion threshold ------
      0.058   13.6   0.1       0.39   10.9   0.0    2.3  2  Metallophos_2  Calcineurin-like phosphoesterase superfamily d


Domain annotation for each model (and alignments):
>> Metallophos  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.2   0.3   2.3e-17   2.1e-13       1     203 [.      56     320 ..      56     321 .. 0.68

  Alignments for each domain:
  == domain 1  score: 51.2 bits;  conditional E-value: 2.3e-17
                  EEEEEEESBTB.....TTCCTHHHHHHHHH......HHHHHH....TTESEEEEESTSSSSS..HHHHHHHHH.HHHHHHH................. CS
  Metallophos   1 lrilvigDlHl.....algggqlddllkll......ddllre....ekpdlvllaGDlvdrg..dlekellel.laalvky................. 63 
                  ++i+ ++D+++      +++g l  ++++l      ++l +      kpd+++l+GDlv     d      ++  ++l +                  
   EPX73804.1  56 FTIMGVADPQIegnhkVEANGFLKGTVDVLgndlylRHLVQTnkfwGKPDAMVLLGDLVSFQnlD--VNEFKNrAERLKRItgaadfnstgvvkeatp 151
                  68999***********777788888887777544443332224556999************9552..4444443444444456666666666666666 PP

                  ...TSEEEEEC-TTS.CHHHHHHHHHHHHHHH...HHHHEHHHCEEETSEEEEEETTE...EEEEEEESECEEE......THHHHHHHHHHHSCHHHH CS
  Metallophos  64 ...pipvylllGNHe.gfeeellnkygylgif...sepwrsdaevfnnlplaslgsgs...lkvlllhGgspel......lvsldklgslnleleape 145
                      ipv++++GNH+ g+ +el+ +++++ i     ++w ++++v +  p+  lg +s   ++v++ +            ++sl+  g l+l +ea +
   EPX73804.1 152 qvnEIPVWAIPGNHDiGYGNELSDSQTEKWISsfgLMNWATKTSVAG-HPVRILGINSlalDNVQFNPE----VaskfqsCNSLSCSGILPLSKEAVD 244
                  7777***********75444555555544433555566666544433.333333333234445555555....3444589999************988 PP

                  CCHHHHHHHHHHTTCSEEEEEESSESS...................CSSSCSCCHHHHHHH.HHHTTESEEEEESSSS CS
  Metallophos 146 pgdewlkdlekrekadwvivlgHsply...................rgsgylfgdealedl.lkkygvdlvisGHtHv 203
                    + +l + ++     ++i+++H+p y                     ++++ ++e +  +    + + l++sGH+H 
   EPX73804.1 245 V-WTFLYE-QAAQAEIPTIIFTHVPFYkpqhacvdkpfisrsdnhrVLKQNHLSYETTQHIfHLLPSIALILSGHDHM 320
                  7.777777.999999************9999999999998866666445555555555555599999**********6 PP

>> Metallophos_2  Calcineurin-like phosphoesterase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   4.3e-05      0.39      28      63 ..     104     172 ..      92     216 .. 0.63
   2 ?   -3.2   0.2      0.96   8.6e+03     120     129 ..     311     320 ..     280     323 .. 0.67

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 4.3e-05
  Metallophos_2  28 vdaiihaGD.....................leeeep............evleellela...pvlaVrGNnD.....e 63 
                    +da++++GD                     +                 e++ +        pv a++GN+D     e
     EPX73804.1 104 PDAMVLLGDlvsfqnldvnefknraerlkrI----TgaadfnstgvvkEATPQ----VneiPVWAIPGNHDigygnE 172
                    6788888885555555544444444444441....033333332222234444....3555999******9444330 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 0.96
  Metallophos_2 120 dvvvcGHtHv 129
                    +++++GH H+
     EPX73804.1 311 ALILSGHDHM 320
                    4788888885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (430 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       300  (0.0167327); expected 358.6 (0.02)
Passed bias filter:                      236  (0.013163); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.31s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 2840.88
//
Query:       EPX73805.1  [L=573]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (573 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       863  (0.0481343); expected 358.6 (0.02)
Passed bias filter:                      238  (0.0132746); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.88u 0.37s 00:00:01.25 Elapsed: 00:00:00.56
# Mc/sec: 3089.37
//
Query:       EPX73806.1  [L=823]
Description: trehalose-6-phosphate phosphatase Tpp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.6e-157  525.0   0.3   2.4e-157  524.4   0.3    1.2  1  Glyco_transf_20  Glycosyltransferase family 20
    2.1e-80  269.2   0.0    3.4e-80  268.5   0.0    1.3  1  Trehalose_PPase  Trehalose-phosphatase
      5e-06   26.4   0.0      0.013   15.2   0.0    2.7  3  Hydrolase_3      haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> Glyco_transf_20  Glycosyltransferase family 20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  524.4   0.3    4e-161  2.4e-157      10     473 ..      46     540 ..      31     541 .. 0.90

  Alignments for each domain:
  == domain 1  score: 524.4 bits;  conditional E-value: 4e-161
                      -SECEEE-S.SCG..EEECCGSSH..HHHHCCCHHCCC-E..EEEEEECCES-CCC......HCCCCHHHCCCCC................EEE CS
  Glyco_transf_20  10 lplklereseeekeeyelkkssgg..lvsalkglkeetev..vwvgwlgvevdesee....akekvskeleekfs................vvp 79 
                      lp k+    +e+++e+e++ ++g+  ++s++++l+++t++  ++vgw+g  ++ s+e    + e+v++  +++++                 +p
       EPX73806.1  46 LPFKSAI--HEKTREWEFTGRRGAttMYSSMNWLANSTYWrtKLVGWTGAIPTISDEpnkgNGESVTEITKKDLKnfersykewncdkrteDIP 137
                      4444333..44555555555554444***********99888999*999988776665445455565444444445558888999999999666 PP

                      EEE-................HHHHHHHCCCHHHHCHHHHHTT-GG....G----HHHHHHHHHHHHHHHHHHHCC--TT-EEEEESGGGTTHHH CS
  Glyco_transf_20  80 vfls................dekveeyyngfsksvLWpllHYklpdsseekefersawdaYvkvnklFAdkiveeikdgdliwvhDYhLmllPe 157
                      v+l+                d+  ++ +  ++++v++pl+HYk+++s e +e+e+++wd+Yv +n++FA+ki+e + +gdli+v+DY+L+l+P+
       EPX73806.1 138 VWLTgcsheekhddevilceDRSSQSRWLAYAENVIRPLIHYKYWTSAEVDENEEHWWDDYVAMNEAFAKKICESYTPGDLIFVQDYSLFLVPK 231
                      666666666666666666658899999999**************************************************************** PP

                      HHHHCCTTSEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSSEEEECTTEEEEETTEEEEEEE------HHH CS
  Glyco_transf_20 158 llRkkledakigfflHiPFPsseifriLpvreeilegllgadliGFhtedyarhFlsccsrllgleveskrggveykgrkvsvkalpigidver 251
                      ++R+k++da+i+f++H+PFPssei+r++p+r++il++ll++d++GF++++yarhF+scc+r+lg e  ++  +v+y++++v v+ l++gidv+r
       EPX73806.1 232 MVREKFPDAVIAFYHHHPFPSSEIARCFPRRNAILNALLECDFVGFEDYSYARHFISCCTRVLGFESGHD--WVSYNSQRVIVRPLTVGIDVPR 323
                      **********************************************************************..********************** PP

                      HHHHCCSCHHHHHHHHHHHHT.TTSEEEEEEEEC-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEEEEB-STTSHHHHHHHHHHHHHHHHHHHH CS
  Glyco_transf_20 252 lesalkkesvsekvkelkerfenkkklilgvDrlDyikGvkqkllaferfLeeypelrgkvvlvqiavpsredveeyqelekeveelvgrINge 345
                      +++++ + +vsek+ el +++e+ +k+i+g+DrlD+i+Gv+qk+++f+rfL++ype+rgkvvl+qi+++s+ +++   +l++++++l+++ N+ 
       EPX73806.1 324 VIRSSGNATVSEKIDELASKYEG-MKVIVGRDRLDEIYGVPQKIISFQRFLRQYPEWRGKVVLIQITISSAFRHP---KLSSHIQRLIDQTNDL 413
                      *********************99.8**************************************************...8*************** PP

                      H-BTTB-SEEEEES---HHHHHHHHHH-SEEEE--SSBSS-CHHHHHHHCSTTT--EEEEETTBGGGGT-TTTSEEE-TT-HHHHHHHHHHHHC CS
  Glyco_transf_20 346 fgtldytPvvylersldfeeliallaaadvllvtslRdGmnlvakeyvvcqqekkgvLiLSeFaGaaqsLkdaailvNPwdieevaeaikeaLk 439
                      +g+ +y+P+++++ ++d ++++all+ ad l+++s+R G++++a+eyvvcq+++ g ++LSeF+G++++L+d+  l+NPwd +e+a++i+e L 
       EPX73806.1 414 YGSENYKPIIHYQDQIDAADYFALLTFADSLFINSIRQGISNIALEYVVCQRDRWGIVMLSEFTGTSAMLHDV-PLINPWDHNETADIINEVLC 506
                      ***********************************************************************97.******************** PP

                      --HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHH CS
  Glyco_transf_20 440 mseeerkkrekkllkqvskhdvqsWaesflselk 473
                      m+ e+rk+ +++++kqv+++++qsW++s+++ l+
       EPX73806.1 507 MPLEKRKSIQHESYKQVTTYTMQSWTSSLIRTLA 540
                      ******************************9987 PP

>> Trehalose_PPase  Trehalose-phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  268.5   0.0   5.6e-84   3.4e-80       1     222 [.     573     796 ..     573     802 .. 0.97

  Alignments for each domain:
  == domain 1  score: 268.5 bits;  conditional E-value: 5.6e-84
                      EEETBTTTB---SSGGG--B-TTHHHHHHHHHTTS-..EEEE-SS-HHH.HHHHH---SSEEEEGGGTEEE-TT--EEE-HHHHTTHHHHHHHH CS
  Trehalose_PPase   1 flDydGTlspivedpdaavpssellslLkkLasdpknvvaivSGrslke.eellvkvpelglaaeHGaeirspsgedwenqaevedlewlkevk 93 
                      +lDydGTl+piv+dp+aa+ps++ll+ L++La+d +n+v+i+SGr++k+  + ++++++lgl+aeHG+++r+p+ ++w+n ae +dl+w+k+vk
       EPX73806.1 573 MLDYDGTLTPIVRDPNAAIPSEKLLKSLRTLAADERNQVWIISGRDQKFlRQYMNDITGLGLSAEHGSFVRQPHRDEWTNLAELLDLSWKKDVK 666
                      79***********************************************99999**************************************** PP

                      HHHHHHHTTSTT-EEEEETTEEEEE-TT--TT....THHHHHHHHHHHHHHH.--EEEE-SSEEEEE-S---HHHHHHHHHHTS--------EE CS
  Trehalose_PPase  94 eileektertpGsyiEekkfalsvHyrnadde..elqakelaehlesvltdkpdlevtqgkkvvevrpqgvsKGkaverlleslgsadseddfv 185
                      +i++++t+rt+Gs+iEek++ +++Hyr+ad+e  ++qa+e+++ le+++++ +++e+++gk+++evrp+  +KG +v+++l+s+  + s+++f+
       EPX73806.1 667 QIFQYFTDRTQGSFIEEKRCGMTWHYRKADPEngSFQAIECETLLEEMVCSRFEVEIMRGKANIEVRPSSINKGGIVKQILSSYSDE-STPSFI 759
                      *************************************************************************************86.****** PP

                      EEEE-SSTTHHHHTTS-TT...-EEEEE--TTS---E CS
  Trehalose_PPase 186 lciGDdrtDedmFsvlrktkesgvsievsavevgskp 222
                      +c+GDdrtDedmF++l+k+++  ++ + +av+vgs +
       EPX73806.1 760 FCAGDDRTDEDMFRSLNKKANLVNKDSSFAVTVGSPH 796
                      *******************999999999999988765 PP

>> Hydrolase_3  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0      0.76   4.6e+03     116     176 ..     408     468 ..     390     474 .. 0.72
   2 !   15.2   0.0   2.2e-06     0.013       2     102 ..     573     683 ..     572     706 .. 0.79
   3 !    8.3   0.0   0.00029       1.7     175     248 ..     726     810 ..     702     815 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 0.76
                  HHHHHHHCHCTCEEEESHHHHHCHCSESEEEEES-HHHHHHHHHHHHHHCTTTEEEEEEST CS
  Hydrolase_3 116 kkkkeeektkkkkeeidseeeledeeiakililkdkekldelekelksklnklltitsssk 176
                  +++++   ++++k++i+++++++  + + +l+++d+  ++++++ +++   + + +++  +
   EPX73806.1 408 DQTNDLYGSENYKPIIHYQDQIDAADYFALLTFADSLFINSIRQGISNIALEYVVCQRDRW 468
                  5666677778888888888888888888888888888888888877776655555555555 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 2.2e-06
                  EEEIIIIIS-....TTS---.HHHHHHHHHHHH.TTSEEEEE-SS-HHHHHHHHHHCCCCSEEEEGGGTEE.ECTTTEEE.EE--B-...HHHHHHHH CS
  Hydrolase_3   2 alDlDGTLln....sdkkis.ektkeaikklke.kgikvviATGRslravlpvleelgldlpvialNGali.ddekgkil.ykstis...kedvkeii 88 
                  +lD DGTL       +  i+ ek  + ++ l + +  +v i +GR  ++++++++++   l + a +G+++ + ++++    ++ ++   k+dvk+i+
   EPX73806.1 573 MLDYDGTLTPivrdPNAAIPsEKLLKSLRTLAAdERNQVWIISGRDQKFLRQYMNDIT-GLGLSAEHGSFVrQPHRDEWTnLAELLDlswKKDVKQIF 669
                  6899****7666666667554999****9998747789*****************887.68999*******9555555553677777999******** PP

                  HHHHHTTCEEEEEE CS
  Hydrolase_3  89 kllkennveillyt 102
                  +++ ++ +  ++++
   EPX73806.1 670 QYFTDRTQGSFIEE 683
                  ***99986655554 PP

  == domain 3  score: 8.3 bits;  conditional E-value: 0.00029
                  STTEEEEEETT-SHHHHHHHHHHHCT..--GGGEEEEESSGGGHHHHHHS.........SEEEEETTS-HHHHHHSSEEE--GGG CS
  Hydrolase_3 175 skgyleimpkgvsKgtalkklakeln..isleeviafGDgeNDieMLeaa.........glgvAmgnaseevkkaAdyvtksnne 248
                  +k ++e+ p +++Kg  +k++++ ++   +++ +   GD+  D  M+            + ++A+  +s+    +Ad+ ++ +++
   EPX73806.1 726 GKANIEVRPSSINKGGIVKQILSSYSdeSTPSFIFCAGDDRTDEDMFRSLnkkanlvnkDSSFAVTVGSPHKLTVADWCIPEAED 810
                  57799*****************999722456667788**********99977777777777888888888888888887777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (823 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       591  (0.0329634); expected 358.6 (0.02)
Passed bias filter:                      502  (0.0279993); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.72u 0.28s 00:00:01.00 Elapsed: 00:00:00.46
# Mc/sec: 5360.46
//
Query:       EPX73807.1  [L=701]
Description: 1-phosphatidylinositol-4-phosphate 5-kinase Its3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.3e-97  323.9   0.1    7.3e-97  323.9   0.1    1.6  2  PIP5K     Phosphatidylinositol-4-phosphate 5-Kinase


Domain annotation for each model (and alignments):
>> PIP5K  Phosphatidylinositol-4-phosphate 5-Kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  323.9   0.1    4e-101   7.3e-97       2     273 ..     302     608 ..     301     609 .. 0.96
   2 ?   -4.7   1.0       0.6   1.1e+04     179     192 ..     648     661 ..     631     679 .. 0.32

  Alignments for each domain:
  == domain 1  score: 323.9 bits;  conditional E-value: 4e-101
                 SS-EEEE----SSS--EEEETTSSEEEEEE-HHHHHHHHHHHHHHHHHHTT-TT--S--EEEEEEEE.ETTEEEEEEEEE-SS-TTS--SEEEEE-S-- CS
       PIP5K   2 ksalkelsseGkSgsffylteDkkfiiKtitksevkflrkllpeYyehvkenpnsLltrfyglhrvklkggkkvrfvVmenlfptdkeiheryDLKGst 100
                 k++l+el s+GkSgsffy+++D++fiiKti++se+kflr++l +Yyehvk+npn+L+++fyglhrvkl+ g+k++fvVm+nlfp++++ih+++DLKGst
  EPX73807.1 302 KYILSELDSPGKSGSFFYFSRDYRFIIKTIHRSEHKFLREILYDYYEHVKNNPNTLISQFYGLHRVKLPFGRKIHFVVMNNLFPPHRDIHQTFDLKGST 400
                 689************************************************************************************************ PP

                 TT-S--.HHHHTSSS-EEEHHHHHHHST.EEE-HHHHHHHHHHHHHHHHHHHHTTB-S-EEEEEEEB---------------------------..... CS
       PIP5K 101 vgReak.kkeeekkektlkDlDliekkeklklgkekreelleqlekDvefLeslnimDYSLLlGihnsekeekeekkesessssekesekseee..... 193
                  gRe + k  +++   t+kD ++ +++++l++g+ kr+ +l q+++D+++L+sl+imDYSLL+Gih+ ++ ++++ ++s  s  +++ ++++       
  EPX73807.1 401 LGRELNeKVPSQNPMCTMKDTNWLRRDMHLQFGPLKRQIFLTQVKADIDLLSSLGIMDYSLLVGIHDLSRGNRDKIRNSLLSVYDPNVSQHQVPatgag 499
                 ******44455666667**********************************************************999999988887777766699*** PP

                 .............................-----------------SEEEEESSSSEEEEEEEEE----B----------------------TTHHHHH CS
       PIP5K 194 .............................aseeeeeseeeedeegekakeensedgkevyylgiIDiLqkynlkKklehalkslkkdkksisavpPkeY 263
                                              + +e+++  +++d++g +a++e +++ + ++y+giID L+ky+  Kk+eh++k+++++++ isavpP eY
  EPX73807.1 500 esnahllrqvvnstgpvsldrscnrlpsnQFMERSNFMFYSDDGGFQATDEMNQPANHIFYIGIIDLLTKYSYVKKAEHLWKGINHSESAISAVPPLEY 598
                 ****************************999******************************************************************** PP

                 HHHHHHHHHH CS
       PIP5K 264 aeRFlkfiek 273
                 a+RF+kfie+
  EPX73807.1 599 ANRFFKFIEN 608
                 ********86 PP

  == domain 2  score: -4.7 bits;  conditional E-value: 0.6
                 -------------- CS
       PIP5K 179 essssekeseksee 192
                   + ++k se++++
  EPX73807.1 648 PGRPKTKPSENKSN 661
                 11111111111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (701 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       581  (0.0324056); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.27s 00:00:00.90 Elapsed: 00:00:00.45
# Mc/sec: 4691.46
//
Query:       EPX73808.1  [L=295]
Description: decaprenyl diphosphate synthase subunit 2 Dlp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.4e-10   39.9   0.6    5.3e-09   35.5   0.6    2.1  1  polyprenyl_synt  Polyprenyl synthetase


Domain annotation for each model (and alignments):
>> polyprenyl_synt  Polyprenyl synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.5   0.6     3e-13   5.3e-09       5     186 ..      73     240 ..      69     248 .. 0.85

  Alignments for each domain:
  == domain 1  score: 35.5 bits;  conditional E-value: 3e-13
                      HHHHHHHHHSSS--HHHHHHHHHHHHHSCG....HHHHHHHHHHHHHHHHHHHHHHHHHHH.HTT-SEETTEE-HHHCTCHHHHHHHHHHHHHH CS
  polyprenyl_synt   5 eealeylveagGKrlRpllvllaaealkee....eeelekaavlawivellhaasLvhDDi.mDdsetRRGqpcahrlvGnklAindgdfllar 93 
                      ++++e +  +    + pllvll+++a ++e    ++ +++ ++l  ++el+haa L+h  i  D+s+            + klA ++gd+ll++
       EPX73808.1  73 DRITEPYKRSDTQFFHPLLVLLMSRASRVEgdtsQQMFQRYKQLSRVTELIHAANLIHINIrEDQST-----------EELKLATLVGDYLLGK 155
                      5555556666667789************444566678999******************888555543...........47899*********** PP

                      HHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCC.SHHHHHHHHHHHTHHHCHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH CS
  polyprenyl_synt  94 afellaklfekslellelfsevllqtveGqlldleeekdddlskfsleeyleivkyKTaylfalpvalaallagasdeelealkdiglelGla 186
                      a+  l++l  +s  ++el++ +++++veG ++   ++     +   ++  +++     a l a ++  a +l +as +  +a+ ++g+ lGl 
       EPX73808.1 156 ASVDLSHL--ESNAVTELMASAIANLVEGHFMKAGSS---PAD---MQANERMLLLQSAFLPAKACLSASILNNASAHINKACFTYGRFLGLS 240
                      ********..778********************9444...444...67899************************98999***********86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (295 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       615  (0.034302); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.28s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2054.82
//
Query:       EPX73809.1  [L=234]
Description: Pot1 associated protein Poz1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (234 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       639  (0.0356406); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1815.12
//
Query:       EPX73810.1  [L=247]
Description: ubiquinone biosynthesis protein Coq9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.2e-29   99.0   0.2    1.5e-28   98.3   0.2    1.4  1  COQ9      COQ9
  ------ inclusion threshold ------
      0.097   12.8   0.1         20    5.3   0.1    2.5  2  Med9      RNA polymerase II transcription mediator complex su


Domain annotation for each model (and alignments):
>> COQ9  COQ9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.3   0.2   1.7e-32   1.5e-28       1      75 [.     147     221 ..     147     223 .. 0.98

  Alignments for each domain:
  == domain 1  score: 98.3 bits;  conditional E-value: 1.7e-32
        COQ9   1 PqnaptslrelarlaDdiwraagDkstDfnwYtkRatLsavyastelymlqdksedfedtwaFldrriddvmale 75 
                 P+n+p+s+++la l+D+i+++a Dks Df wYtkRa++sa+y+++el+m++d+s++f++t +F+++r+++++al+
  EPX73810.1 147 PSNLPSSIKSLADLSDEILYLAQDKSADFHWYTKRAVVSAIYSASELFMTKDNSPNFQATYDFVQHRVQHAKALN 221
                 99*********************************************************************9987 PP

>> Med9  RNA polymerase II transcription mediator complex subunit 9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.1    0.0023        20       8      51 ..     100     143 ..      94     149 .. 0.85
   2 ?    4.8   0.0    0.0034        31      14      41 ..     196     220 ..     183     240 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0023
        Med9   8 dilksiekdpnlsskdletktgelrhkLkkarelirelpgidrs 51 
                 ++l++ ++  +l ++ +e+ t  +  +L+  r +++ lp +  +
  EPX73810.1 100 YALREQKNHLTLMQNTTEKVTHLIWSRLQANRDVMEHLPQMIAT 143
                 677777888899999************************98665 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.0034
        Med9  14 ekdpnlsskdletktgelrhkLkkarel 41 
                 +kd+   s ++++  ++++h+ ++a++l
  EPX73810.1 196 TKDN---SPNFQATYDFVQHRVQHAKAL 220
                 4444...8899999************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       648  (0.0361426); expected 358.6 (0.02)
Passed bias filter:                      476  (0.0265492); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1757.58
//
Query:       EPX73811.1  [L=104]
Description: hypothetical protein SOCG_03029 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-16   59.1   0.2    4.5e-16   58.7   0.2    1.2  1  ER        Enhancer of rudimentary


Domain annotation for each model (and alignments):
>> ER  Enhancer of rudimentary
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.7   0.2   2.5e-20   4.5e-16       2      95 ..       9      98 ..       8     101 .. 0.89

  Alignments for each domain:
  == domain 1  score: 58.7 bits;  conditional E-value: 2.5e-20
          ER  2 htilLiqpskkpesrtyldyesvkealdgicklyeeaLkeanpskksitYdisdLfefidsladlsaLvleketksylprdkewikekiikllr 95
                h+ilLiq+s+ p++r ++d+ s+++a++ i+ +y +   +++p +   t dis+++ f d++ d+  Lv++++ ++y+p+dk+w+  +  ++++
  EPX73811.1  9 HIILLIQQSSDPKTRIWSDHCSIRSAIEYILGVYSTG--QEHPIQ--DTLDISHFYGFFDEIYDCVPLVYDRHFRAYIPHDKQWLLFQAQEYMK 98
                9*********************************875..444444..4679*********************************9888877776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       353  (0.0196888); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 762.89
//
Query:       EPX73812.1  [L=777]
Description: vacuolar carboxypeptidase Y [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   3.6e-127  425.3   0.1     7e-127  424.3   0.1    1.5  1  Peptidase_S10   Serine carboxypeptidase
  ------ inclusion threshold ------
      0.061   12.9   9.7       0.11   12.0   9.7    1.4  1  DDRGK           DDRGK domain
        4.7    7.2   7.4        9.7    6.2   7.4    1.5  1  Neur_chan_memb  Neurotransmitter-gated ion-channel transmembr


Domain annotation for each model (and alignments):
>> Peptidase_S10  Serine carboxypeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  424.3   0.1  1.2e-130    7e-127       8     418 ..     358     770 ..     351     771 .. 0.94

  Alignments for each domain:
  == domain 1  score: 424.3 bits;  conditional E-value: 1.2e-130
                    SSEEEEEEEECSTTTTEEEEEEEEE-SSGTTTS-EEEEE--TTTB-THHHHHHTTSSEEEETTTTSEEEE-TT-GGGCSEEEEE--STTSTT-EET CS
  Peptidase_S10   8 nfkqysGYldveeeedkslFYwfveseknpeedplvlWLnGGPGCsSldGlleElGPfrvnkdstkkleenpysWnkvanvlfldqPvGvGFSysn 103
                    ++kq++GYldv+  +d++lF+wf+es+++p +dp+vlWLnGGPGCsS++Gl+ ElGP r+n  +t k+e+np+sWn++a+v+fldqPvG GFS  +
     EPX73812.1 358 TVKQETGYLDVD--DDRHLFFWFFESRNDPVNDPVVLWLNGGPGCSSMTGLFLELGPSRIN-VETLKPEYNPHSWNSNASVIFLDQPVGAGFSNGD 450
                    689*********..99*********************************************.668******************************9 PP

                    TSSGS--SHHHHHHHHHHHHHHHHHHSTCGTTSEEEEEEETTHHHHHHHHHHHHHTHCCH--S..........STSEEEEEEEESE-SBHHHHHCC CS
  Peptidase_S10 104 tksdvktddeevaedlyefLkkffekfpeyksrdfyitGESYaGhyvPalakeilkknkkekk..........kkinLkGlligNglideaeqvns 189
                     +     d+ ++++d+y+fL+ ff+kfp+y++ +f+itGESYaGhy+P++akei+++n+  ++          + inLk+++igNgl+d+  q+ +
     EPX73812.1 451 GSVL---DTITAGKDVYAFLTLFFAKFPQYAHLPFHITGESYAGHYIPQFAKEIIEHNQGANDfvatgyehlkSFINLKSVAIGNGLTDPLVQYYY 543
                    9887...99*************************************************999889********99********************** PP

                    HHH...HHHHTTSSHHHHHHHHHHHHEETHHHHHHHHHHHHHHHHHHHHH.....HHHHCH.........CEETTETTSEETTSSEEHHHCTTCCC CS
  Peptidase_S10 190 yve...fayehgliseeeyeslkkacekkeeleqesekcanllekaskva.....vekenk.........glnvynileeccklkaelkksstdaq 268
                    y +    + +  ++ +e++++l++a     ++++ +  c+++  +  +v      +    +         glnvy+i+e+c            ++ 
     EPX73812.1 544 YGKmacESPYGPIMPQEQCDRLTDAY---GTCSKLTAACYQTGFTPICVGaslycN----NammgpfqqtGLNVYDIREQC------------RDP 620
                    ***444444567899******99999...899**********99999866855540....4455556666***********............677 PP

                    CTTTTTCHHHHHHHHTSHHHHHHTT--TTSSS--SB-HHH...HHHCTCCC-SBCHHHHHHHHHTT-EEEEEEETT-STT-HHHHHHHHHHTECTT CS
  Peptidase_S10 269 ggedpydesyvekylnkkeVrkalhvnasvkkweecndsv...feqleddisksveeileellesglrvliynGdvDlicnvlgteawikklelsg 361
                    ++ ++ + +++ekyln++eV +al+v+   + ++ cn++v   f +++d+++k+++++++ +le+gl+vliy+Gd+D+icn++g+eaw+++le+sg
     EPX73812.1 621 ESLCYPEVTAIEKYLNQEEVIEALGVE---QGFKGCNTQVnigFLFKGDWMRKTFRDDVTVILEAGLPVLIYAGDADYICNYMGNEAWTDALEWSG 713
                    88999999*****************96...78********99****************************************************** PP

                    ECCSCCCEEEETTTCESEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHHHHHHT CS
  Peptidase_S10 362 kkefrpwevspkkengqvaGyvkeyenltfltvkgaGHmvPedkpeealqllerfis 418
                    ++ef++ +  p++  g +aG  k+y+n+++l++++aGHmvP+++pe +l++l+++++
     EPX73812.1 714 HREFYESNLVPWSPAGSEAGRGKTYKNFSYLRIYEAGHMVPFNQPEVSLEMLNQWLD 770
                    *******************************************************97 PP

>> DDRGK  DDRGK domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   9.7   1.9e-05      0.11      18     109 ..     153     244 ..     129     258 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1.9e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXHHHHHHHHHH CS
       DDRGK  18 rqqreaeeeereerkkleekreeerkekeekeeekekkkeeeerkkeeekerkeqeeyeklksefvveee.gtekesaeeeeklleefinyik 109
                 + + ++e++++++++k+  ++++++ ++   e+ +  +k++++ k+e+++ +ke++e++ ++  + + e  g+  ++ ++ +++ eef  +++
  EPX73812.1 153 YPEEKQEDRDQKRKHKKPLHKKKKMGHSSSPEQTEGVNKKHHKSKEEKNDSKKEEDEFDGIQRDILILEAfGELMQNGNV-DNISEEFASFLE 244
                 4444555555555555555566677777777778888899999999999************9998775551555555555.889999999986 PP

>> Neur_chan_memb  Neurotransmitter-gated ion-channel transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   7.4    0.0016       9.7      90     220 ..      90     217 ..      86     232 .. 0.63

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0016
                     --HHHHHHHTTHHHHHHC--------------.--------------------------------------SS---TTGGG--.......----- CS
  Neur_chan_memb  90 tmpawvrkvfldklprllfmkrpsevkdnekklssgasseaeelilskskseskkaklseeqgsekastckckckegeeaspstqlsk..eelsp 182
                      m+++v  +f d   +l+ m    ++k + k++++ ++ +  +   ++sk++++k++ +   ++  +++++   ++ ++++p ++++k  ++ sp
      EPX73812.1  90 DMADRVDDIFEDVEDDLDEMVDSIKHK-DIKNKKKPCPCKDRKANGMDSKDKHMKEDDEAFFSKYPEEKQEDRDQKRKHKKPLHKKKKmgHSSSP 183
                     699999999999999999998765555.5555677777788888888888877777777777766666666666555555554444444455555 PP

                     TTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Neur_chan_memb 183 elkkavegvkyiadhlraededksvkedwkyvamviDr 220
                     e +   egv+   +h  +e++++s ke+ ++ + + D 
      EPX73812.1 184 EQT---EGVNKK-HHKSKEEKNDSKKEEDEFDGIQRDI 217
                     444...444433.4444444455555555666555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (777 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1525  (0.0850577); expected 358.6 (0.02)
Passed bias filter:                      601  (0.0335211); expected 358.6 (0.02)
Passed Vit filter:                       100  (0.00557756); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.81u 0.30s 00:00:01.11 Elapsed: 00:00:00.46
# Mc/sec: 5119.06
//
Query:       EPX73813.1  [L=280]
Description: NADH/NADPH dependent indole-3-acetaldehyde reductase AKR3C2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-39  136.4   0.1    2.3e-38  132.1   0.1    2.0  1  Aldo_ket_red  Aldo/keto reductase family


Domain annotation for each model (and alignments):
>> Aldo_ket_red  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.1   0.1   1.3e-42   2.3e-38       3     292 ..      16     269 ..      15     271 .. 0.93

  Alignments for each domain:
  == domain 1  score: 132.1 bits;  conditional E-value: 1.3e-42
                   EEE-SSS-ST.TS-HHHHHHHHHHHHHTT--EEE--TT-TTTHHHHHHHHHHHH-TTTGGG-EEEEEE--SSSTTSSSS-HHHHHHHHHHHHHHHT- CS
  Aldo_ket_red   3 glGtwqlgskeeiskeealellrraleaGinffDtAevYgkgqseellGealkksrkkreeviiatKvdlrdaeiksglskeniresleeslkrLgt 99 
                   g+Gt+ ++ ++ + + e ++ +++a+e+G++++D+Ae+Y    +ee++G alk+ +++re+++i++Kv         +   e+i ++l +slk+Lg+
    EPX73813.1  16 GVGTALYKKDNSKFQTETVDSVKKAIENGFTHIDCAEIY---GNEEEVGAALKDLKVPREKLFITSKV---------SRGIEDIPAALSTSLKKLGL 100
                   78******9999999999999******************...9*************************.........555679************** PP

                   S-EEEEEE-S--TTS-....HHHHHHHHHHHHHTTSEEEEEEES--HHHHHHHHHTTT--EEEEE-B-BTT-HHHHTTHHHHHHHTT-EEEEBSTTG CS
  Aldo_ket_red 100 dyvDllllHrpdpslp...sieevldaleelvkeGkiraiGvSnfsveqlekakkkkkvkivavqveynllreleeegllelckkkgvpliaysplg 193
                   dy+Dl+llH p + ++    + + ++a+e    +G + aiGvSnf ve lek+ +++k+++ ++q+e++++    ++ ll++c+ k++ +  ys l 
    EPX73813.1 101 DYLDLYLLHAPRFFYEkkiPLSKGWEAMETELGQGRLHAIGVSNFYVEDLEKLMETAKIPPRVNQIEFHPQVFTRSKSLLDYCRSKNILVEGYSSLR 197
                   ***********887776677***************************************************999999*******************8 PP

                   GGTTGTTTSS---SSSCCC-------TS-HHHHHHHHHHHHHHHHTT--HHHHHHHHHTTSTT-SEEEE--SSHHHHHHHHGGGG----HHHHHHHH CS
  Aldo_ket_red 194 gGlltgkyqseedkedkeprkdlkrdertsknldaaeelselakehgvslaqlalryalsqpavgivipgasnieqlednldalelklseeevaeld 290
                      lt++ +  +                        + +++la++++vs + + l++    ++++ ++  +s++e+++d l +  +kl + ++++l 
    EPX73813.1 198 --PLTKEPE--G---------------------PVSKLAKSLAEKYNVSDSLILLAWSS--SQGVAPVTTTSKVERMKDYLTYKTVKLEQADIDALT 267
                   ..5662222..1.....................456789*******************9..9**********************99********998 PP

                   HH CS
  Aldo_ket_red 291 el 292
                   e+
    EPX73813.1 268 EA 269
                   86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       447  (0.0249317); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2026.17
//
Query:       EPX73814.1  [L=350]
Description: sphingosine hydroxylase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.6e-14   51.9  17.6    9.6e-14   51.9  17.6    1.9  2  FA_hydroxylase  Fatty acid hydroxylase superfamily
  ------ inclusion threshold ------
      0.022   15.0   0.1      0.043   14.0   0.1    1.4  1  Anth_synt_I_N   Anthranilate synthase component I, N terminal


Domain annotation for each model (and alignments):
>> FA_hydroxylase  Fatty acid hydroxylase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.1     0.054   4.8e+02      45      81 ..     154     191 ..     126     196 .. 0.68
   2 !   51.9  17.6   1.1e-17   9.6e-14       2     133 .]     191     332 ..     190     332 .. 0.78

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.054
  FA_hydroxylase  45 lrahplealllallllllllllgplsalll.vlvlaal 81 
                     ++++p+ ++ ++++ ++ ++++ +  +l + v++l+++
      EPX73814.1 154 FSKTPWYVIPMIWIPCITYFFMESCTVLPFpVALLMFF 191
                     55667777777777777777777777766655555554 PP

  == domain 2  score: 51.9 bits;  conditional E-value: 1.1e-17
  FA_hydroxylase   2 llallledfveYwvHr.llHrvk.......l..lwrrlHkvHHsseaptalaalrahplealllallll.llllllg.plsalll.vlvlaalle 83 
                     ++++ ++++veY++Hr l+H  +       +  l+  +H vHH  +a++   +l + p+ ++++a +++ l+ l+++ +l  + + + v++++++
      EPX73814.1 191 FVGIGVWTIVEYFMHRcLFHLDEytpdhpvFltLHFLFHGVHHFLPADRY--RLVMPPALFIIFATPWYrLVRLFFPyHLAIAGFsGGVFGYVCY 283
                     68899***************833555777635788889999997666665..6677777777777555514445555577777779********* PP

  FA_hydroxylase  84 lliHsglhvslgwllerllatpraHrlHHskneegnfgvllslwDrlfgT 133
                      l+H+ lh + +   +++ + ++ H  HH+k+ ++ fgv++ +wDr+fgT
      EPX73814.1 284 DLTHYFLH-HKRLPQGYFTQLKTWHLDHHYKDYKTAFGVTSAFWDRVFGT 332
                     ******43.333333899*******************************9 PP

>> Anth_synt_I_N  Anthranilate synthase component I, N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.1   4.7e-06     0.043      89     110 ..     272     293 ..     255     313 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 4.7e-06
  Anth_synt_I_N  89 pfvgGlvGylgYDlvreieklp 110
                     f+gG++Gy+ YDl++++ + +
     EPX73814.1 272 GFSGGVFGYVCYDLTHYFLHHK 293
                    49***************96544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (350 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       384  (0.0214178); expected 358.6 (0.02)
Passed bias filter:                      272  (0.015171); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.46
# Mc/sec: 2276.59
//
Query:       EPX73815.1  [L=591]
Description: RNA-binding protein Rsd1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.8e-43  146.2   0.1    3.4e-16   58.8   0.0    3.3  3  RRM_1         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
    5.7e-08   32.6   0.0       0.19   11.8   0.0    3.3  3  Nup35_RRM_2   Nup53/35/40-type RNA recognition motif
    1.8e-07   32.1   6.0    1.4e-05   26.1   0.4    3.5  2  RBM39linker   linker between RRM2 and RRM3 domains in RBM39 p
    9.7e-07   28.6   0.0       0.13   12.1   0.0    3.3  3  RRM_occluded  Occluded RNA-recognition motif
    0.00012   22.1   0.1      0.044   13.8   0.0    3.0  3  RRM_3         RNA binding motif
     0.0038   17.1   0.0        6.7    6.5   0.0    3.1  3  DUF1866       Domain of unknown function (DUF1866)


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.8   0.0   1.1e-19   3.4e-16       1      66 [.     229     294 ..     229     297 .. 0.96
   2 !   58.6   0.0   1.3e-19   3.8e-16       2      69 ..     330     397 ..     329     398 .. 0.97
   3 !   25.0   0.0     4e-09   1.2e-05      12      69 ..     517     571 ..     516     572 .. 0.93

  Alignments for each domain:
  == domain 1  score: 58.8 bits;  conditional E-value: 1.1e-19
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETT CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklgg 66 
                 +fV+ L++ +t +eL+++F++ Gp++++++vrd   g+skg+a+VeF ++++ ++Al+ l gk l g
  EPX73815.1 229 VFVSQLANRLTTRELYDFFENAGPVRDAQIVRDkVSGRSKGVAYVEFRDEDSVQHALS-LSGKRLLG 294
                 8*********************************************************.**998765 PP

  == domain 2  score: 58.6 bits;  conditional E-value: 1.3e-19
                 EEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   2 fVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                  + n+++++++e++k++F++fG+i+ ++l rd +++skgf+++++ ++  A++Ale++ng  l gr++
  EPX73815.1 330 CIANIHFNLSDEDVKAIFEPFGEIELVRLQRDDQNRSKGFGYIQYRDPKCARNALEKMNGFDLAGRNM 397
                 689**************************************************************987 PP

  == domain 3  score: 25.0 bits;  conditional E-value: 4e-09
                 HHHHHHHHHT.TSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1  12 eeeLkelFsk.fGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 e++++e  ++ +G++ +i++v++      g  fV+F+++e+ ekA+  l+ + +ggr++
  EPX73815.1 517 EQDVREECENkYGRVMHITVVPT----DAGEIFVKFKTPEECEKAVLGLHQRWFGGRNI 571
                 68888888888***********5....9*****************************97 PP

>> Nup35_RRM_2  Nup53/35/40-type RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.0   0.00022      0.67      16      53 .]     242     285 ..     236     285 .. 0.85
   2 !    6.9   0.0    0.0021       6.3      16      53 .]     342     384 ..     338     384 .. 0.86
   3 !   11.8   0.0   6.2e-05      0.19      13      53 .]     516     558 ..     514     558 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00022
  Nup35_RRM_2  16 lVlehFasfGeIvkhyvp......kevsvmyvkfesekdaekAL 53 
                  + +++F++ G++ +  +       +++ v+yv+f++e++ + AL
   EPX73815.1 242 ELYDFFENAGPVRDAQIVrdkvsgRSKGVAYVEFRDEDSVQHAL 285
                  5688*******99944444888899999***********99997 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0021
  Nup35_RRM_2  16 lVlehFasfGeIvkhyvp.....kevsvmyvkfesekdaekAL 53 
                  +V + F+ fGeI           +++ + y++++++k a  AL
   EPX73815.1 342 DVKAIFEPFGEIELVRLQrddqnRSKGFGYIQYRDPKCARNAL 384
                  566669999999998888889988999***********99997 PP

  == domain 3  score: 11.8 bits;  conditional E-value: 6.2e-05
  Nup35_RRM_2  13 lielVlehFas.fGeIvkhyvp.kevsvmyvkfesekdaekAL 53 
                  l+++V+e  ++ +G+++++ v       ++vkf+++ ++ekA+
   EPX73815.1 516 LEQDVREECENkYGRVMHITVVpTDAGEIFVKFKTPEECEKAV 558
                  6677777777669*****8876566889**************8 PP

>> RBM39linker  linker between RRM2 and RRM3 domains in RBM39 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.8      0.95   2.9e+03      32      58 ..      22      42 ..       6      67 .. 0.41
   2 !   26.1   0.4   4.7e-09   1.4e-05      13      91 .]     462     512 ..     461     512 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.95
  RBM39linker 32 ipaaaaaalqnsaaaaeaataveaaap 58
                 ++++++++    ++      +v+++ p
   EPX73815.1 22 STNSQQQPVSSVSS------NVQESHP 42
                 11111111111111......2222222 PP

  == domain 2  score: 26.1 bits;  conditional E-value: 4.7e-09
  RBM39linker  13 atsRaaLMakLarsgtalsipaaaaaalqnsaaaaeaataveaaapaeaklasvavpiatecllLkNMFdpaeEtepdW 91 
                  + sR++LM+kLar+++++ +        +++++                    ++ p   + ++LkNMFdp+eEt + W
   EPX73815.1 462 TISRDELMKKLARTDDTTPV--------PMTEV--------------------QPDPSRYRSVILKNMFDPKEETSATW 512
                  579**********9995333........33222....................233556689***************99 PP

>> RRM_occluded  Occluded RNA-recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0     0.039   1.2e+02       2      62 ..     227     291 ..     226     296 .. 0.73
   2 !    9.7   0.0   0.00025      0.76       4      71 ..     329     400 ..     327     405 .. 0.86
   3 !   12.1   0.0   4.5e-05      0.13      17      74 ..     519     577 ..     516     579 .. 0.88

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.039
  RRM_occluded   2 rtisllplsDtvnkariralveekegeikkivLvpdheG......AivefkdekiagkasLaLdgse 62 
                   rt+ + +l+ + ++ ++ +++e+  g++++ ++v d+ +      A vef+de ++ + +L+L g++
    EPX73815.1 227 RTVFVSQLANRLTTRELYDFFENA-GPVRDAQIVRDKVSgrskgvAYVEFRDEDSV-QHALSLSGKR 291
                   677788899999999999999999.8888888887753222223499999998776.4557777765 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00025
  RRM_occluded   4 isllplsDtvnkariralveekegeikkivLvpdheG.....AivefkdekiagkasLaLdgsefegkklrcG 71 
                   +++ ++  + +++ ++a++e+  gei+ + L+ d +        ++++d k a  a+ +++g +++g+++r++
    EPX73815.1 329 LCIANIHFNLSDEDVKAIFEPF-GEIELVRLQRDDQNrskgfGYIQYRDPKCARNALEKMNGFDLAGRNMRVC 400
                   6788899999************.********9987642233468*************************9997 PP

  == domain 3  score: 12.1 bits;  conditional E-value: 4.5e-05
  RRM_occluded  17 riralveekegeikkivLvpdheGAi.vefkdekiagkasLaLdgsefegkklrcGtvk 74 
                    +r+ +e+k g++++i +vp   G i v+fk  +   ka+L L+   f g+++  ++++
    EPX73815.1 519 DVREECENKYGRVMHITVVPTDAGEIfVKFKTPEECEKAVLGLHQRWFGGRNIIASKIS 577
                   5777788888***********9997659************************9877765 PP

>> RRM_3  RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.96   2.9e+03      27      38 ..     269     280 ..     229     290 .. 0.62
   2 !   13.8   0.0   1.5e-05     0.044       9      63 ..     334     393 ..     328     434 .. 0.83
   3 ?    4.7   0.0      0.01        31      23      56 ..     526     560 ..     513     583 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.96
                 -ECEEEE-TTSS CS
       RRM_3  27 evayvdyekgdk 38 
                  vayv++ ++d+
  EPX73815.1 269 GVAYVEFRDEDS 280
                 455666655554 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 1.5e-05
                 -SSS--HHHHHHHCHCCS-ECEEEE-TTSSE.....EEEEESSHHHHHHHHHHHHHC-B- CS
       RRM_3   9 lnkelsredikellsklgevayvdyekgdke.....gevrFkedeeakkalekateaklk 63 
                 ++ +ls ed+k +++ +ge++ v ++++d++     g++++ +++ a++alek+  ++l 
  EPX73815.1 334 IHFNLSDEDVKAIFEPFGEIELVRLQRDDQNrskgfGYIQYRDPKCARNALEKMNGFDLA 393
                 5667899**********************98777779****************9877554 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.01
                 HCCS-ECEEEE-TTSS.EEEEEESSHHHHHHHHHH CS
       RRM_3  23 sklgevayvdyekgdk.egevrFkedeeakkalek 56 
                 +k+g v ++ +  +d+ e  v+Fk++ee++ka+  
  EPX73815.1 526 NKYGRVMHITVVPTDAgEIFVKFKTPEECEKAVLG 560
                 68999999999877764788***********9865 PP

>> DUF1866  Domain of unknown function (DUF1866)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.5   0.0    0.0023       6.7      73     114 ..     271     312 ..     242     342 .. 0.82
   2 !    6.4   0.0    0.0025       7.4      58     128 ..     348     426 ..     334     443 .. 0.77
   3 ?   -0.5   0.0      0.33   9.8e+02      31      69 ..     498     537 ..     488     559 .. 0.61

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0023
                 EEEEESSCHHHHHHHHGCCSEETTEEEEEEEXXXXXXXXXXX CS
     DUF1866  73 mwvtFrdgesaLnalslksvkvlgralkiklkskdWlkslee 114
                  +v Frd +s   alsl+++++lg  + ++l   +  ++ +e
  EPX73815.1 271 AYVEFRDEDSVQHALSLSGKRLLGIPVIVQLTEAEKNRKARE 312
                 689*************************99987666555554 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0025
                 HCCS-ECEEEEETTCE.......EEEESSCHHHHHHHHG.CCSEETTEEEEEEEXXXXXXXXXXXXXXXXXXXXXXXXX CS
     DUF1866  58 tslGeviLvRfvedkm.......wvtFrdgesaLnalsl.ksvkvlgralkiklkskdWlksleeeillkttetisvsl 128
                   +Ge+ LvR+  d         ++ +rd + a nal++ ++  + gr++++ l  + +  +  + +l++ ++++  + 
  EPX73815.1 348 EPFGEIELVRLQRDDQnrskgfgYIQYRDPKCARNALEKmNGFDLAGRNMRVCLGNDKFTTETTSSMLRRFDDMMNRTE 426
                 5699******987753333444489***********986489*****************99999999998888877644 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.33
                 EEEECS-SCCCCHS--HHHHHHHHHHH.HCCS-ECEEEEE CS
     DUF1866  31 lvslksgdedeknifdenlideLlqel.tslGeviLvRfv 69 
                 l ++ +++e+ ++++ e+l +++ +e+  ++G v+ + +v
  EPX73815.1 498 LKNMFDPKEETSATWVEELEQDVREECeNKYGRVMHITVV 537
                 5555556666666666666666666662356665544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (591 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       932  (0.0519828); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.86u 0.41s 00:00:01.27 Elapsed: 00:00:00.61
# Mc/sec: 2939.79
//
Query:       EPX73816.1  [L=131]
Description: histone H2A beta [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.7e-19   67.3   1.2    1.2e-18   66.5   1.2    1.4  1  Histone_H2A_C  C-terminus of histone H2A
    1.5e-16   61.0   0.0    1.9e-16   60.6   0.0    1.1  1  Histone        Core histone H2A/H2B/H3/H4
    8.2e-06   26.0   0.0    1.3e-05   25.4   0.0    1.3  1  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a


Domain annotation for each model (and alignments):
>> Histone_H2A_C  C-terminus of histone H2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.5   1.2   2.1e-22   1.2e-18       1      33 [.      93     125 ..      93     126 .. 0.97

  Alignments for each domain:
  == domain 1  score: 66.5 bits;  conditional E-value: 2.1e-22
  Histone_H2A_C   1 EELnkLLggVTIAqGGVLPnIhkvLLpkktkkk 33 
                    EELnkLLg+VTIAqGGV+PnI++ LLpk+++k+
     EPX73816.1  93 EELNKLLGHVTIAQGGVVPNINAHLLPKQSGKA 125
                    9*****************************997 PP

>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.6   0.0   3.2e-20   1.9e-16      53     129 ..      15      90 ..       9      92 .. 0.95

  Alignments for each domain:
  == domain 1  score: 60.6 bits;  conditional E-value: 3.2e-20
                 HHHHXXSXXSXHHHHHHHHHHHH.TTSSSXEEXHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTXSEEXHHHHHHHHH CS
     Histone  53 kyqkstdlliqklpfaRvvreivksekedlrisaeavlalqealEallvelfeeAnllakhaKRvTitpkDiqlArr 129
                   q+++++ + ++p+ Rv+r ++k     +r+ a a+++l+++lE+l +e++e+A+++a+++K+ +i p+++qlA+r
  EPX73816.1  15 SAQSRSAKAGLAFPVGRVHRLLRK-GNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIR 90 
                 579999*****************9.9999***********************************************9 PP

>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.0   2.2e-09   1.3e-05       3      65 .]      27      89 ..      25      89 .. 0.97

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 2.2e-09
                   XXHHHHHHHHHCCTTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHHH CS
  CBFD_NFYB_HMF  3 LPiarvkkImksdpdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehiklAv 65
                   +P+ rv +++++ + a+++   A++++a ++e  + e+++ A   + ++k+  i + h++lA+
     EPX73816.1 27 FPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAI 89
                   9***********************************************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       414  (0.0230911); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.35s 00:00:00.92 Elapsed: 00:00:00.55
# Mc/sec: 721.08
//
Query:       EPX73817.1  [L=292]
Description: citrate transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.8e-56  186.4   1.9    9.2e-22   76.8   0.2    4.0  4  Mito_carr  Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.6   0.0   2.7e-11   4.9e-07       4      39 ..      18      53 ..      15      62 .. 0.90
   2 !   14.9   0.0     1e-06     0.018      64      96 ..      66      98 ..      54      99 .. 0.92
   3 !   62.3   0.0   1.7e-21   3.1e-17       6      94 ..     105     193 ..     100     196 .. 0.92
   4 !   76.8   0.2   5.2e-26   9.2e-22       3      93 ..     202     289 ..     200     291 .. 0.95

  Alignments for each domain:
  == domain 1  score: 29.6 bits;  conditional E-value: 2.7e-11
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCS CS
   Mito_carr  4 svlkellaGglagavatlvttPldvvKtrlqtqkks 39
                ++lk++laGg+agav+ ++t+P +++Ktr+q+++k 
  EPX73817.1 18 GPLKSILAGGIAGAVEISITYPAEFAKTRFQLHRKV 53
                6899****************************9886 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 1e-06
                GGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCTT CS
   Mito_carr 64 lyrGllpnllrvapasalkfvlyetlkrlllkk 96
                 y+G++  +++++ ++a++f++++++k++l ++
  EPX73817.1 66 WYKGCSTVVIGNSLKAAVRFFAFDSIKKTLADE 98
                7***************************99765 PP

  == domain 3  score: 62.3 bits;  conditional E-value: 1.7e-21
                 HHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
   Mito_carr   6 lkellaGglagav.atlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlll 94 
                  +++laG+ ag++ +tlv tP++ +Kt +  ++k+ k ++ +++l+  k+++k+ G+r++yrGllp++ r+a +s+++f++y+++k+ l+
  EPX73817.1 105 PRTVLAGLGAGIAeSTLVLTPFESIKTSIIDEGKKPKPRY-HGFLKGCKTMLKDGGIRAFYRGLLPTVARQATNSGVRFTAYNSIKQSLQ 193
                 6889*********778999***************998866.55*******************************************9987 PP

  == domain 4  score: 76.8 bits;  conditional E-value: 5.2e-26
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   3 lsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                 l++++++l+G++ag++++ +t+P+d++K r+q+   ++++++    +++ +ki+ ++G++ +++G++p+l r + + ++ f++ye++ ++l
  EPX73817.1 202 LGTVSTFLVGSVAGIITVYCTQPIDTIKSRMQSLTAKQEYKN---SFHCAYKIFTQDGILRFWSGATPRLARLILSGGIVFTVYEKVMDVL 289
                 678999***************************999999877...8****************************************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (292 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       377  (0.0210274); expected 358.6 (0.02)
Passed bias filter:                      347  (0.0193541); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.34s 00:00:00.95 Elapsed: 00:00:00.55
# Mc/sec: 1585.43
//
Query:       EPX73818.1  [L=189]
Description: ureidoglycolate hydrolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.8e-55  185.4   0.0      1e-54  185.2   0.0    1.0  1  Ureidogly_lyase  Ureidoglycolate lyase


Domain annotation for each model (and alignments):
>> Ureidogly_lyase  Ureidoglycolate lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  185.2   0.0   5.6e-59     1e-54       3     184 ..       5     182 ..       3     185 .. 0.95

  Alignments for each domain:
  == domain 1  score: 185.2 bits;  conditional E-value: 5.6e-59
  Ureidogly_lyase   3 rikiepLtkeaFapFGdvieapeeakkappesvaiNqgtalkyhdlaelenays.pskkearavislfrcaprelpakeekklldvkilErHpf 95 
                      ++  +++t+e Fap+G+v++++++ +     +v++N+gta+ky+ ++e en y+ +s+  ++a +++f+++p  +pa+ee+ ++++++lErHp+
       EPX73818.1   5 VLYSKQFTPESFAPYGTVVQPKDNGP-----MVIANAGTAKKYLGVSESENYYKkSSTPSSKATWNFFSTKPSVFPADEESPAFKISVLERHPY 93 
                      677889***************77777.....9**********************8999999********************************* PP

  Ureidogly_lyase  96 tsQtFvPlglsskekaylvvVAptlkrglpdlkklraFvakgaqaVtygagvWHaplvvlgdkpidFvvvq.adrvaeedceevlleeel 184
                      t+QtF+Pl ++ +e++ylv VAp++++glpd+++++aFvakg q+Vty+agvWHap+v++g k++  + ++ +++v+++dc+     ++l
       EPX73818.1  94 TTQTFIPLCRDAQESSYLVAVAPNSPDGLPDWERVEAFVAKGCQGVTYAAGVWHAPMVTIG-KDTMLAAFNyENGVDNDDCQVQSAPSPL 182
                      **********99999**********************************************.9999999999****999***99887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       313  (0.0174578); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.33s 00:00:00.92 Elapsed: 00:00:00.55
# Mc/sec: 1037.96
//
Query:       EPX73819.1  [L=321]
Description: chitin deacetylase Cda1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.1e-16   59.9   0.0    3.2e-16   59.4   0.0    1.2  1  Polysacc_deac_1  Polysaccharide deacetylase


Domain annotation for each model (and alignments):
>> Polysacc_deac_1  Polysaccharide deacetylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.4   0.0   1.8e-20   3.2e-16       3     121 ..      65     187 ..      63     189 .. 0.84

  Alignments for each domain:
  == domain 1  score: 59.4 bits;  conditional E-value: 1.8e-20
                      HTTSTEEEEEEEESSCSCHHHHHHHHHHCT--EEEEE-HHHHCH-HHHHHHHHHTTEEEEE--SS--EGGGSHHHHHHHHHHHHHHHHHHH..H CS
  Polysacc_deac_1   3 tkgkksvalTfDdgprdntteilpvLkkykvkatffvigglvedypdevremaasGveignHtinhsnlkrlseeevrreierakdalrka..l 94 
                      +  ++s+  +f+ g+r++  +il+++kk++v+ t++ ig+ ve++p  v +m ++G+e+g+H++ + n++++ ee + ++++++   ++ka  +
       EPX73819.1  65 PVRERSIESCFEYGSRCGFWRILNLFKKHEVPFTCWAIGQAVENNPTVVHAMEEAGCEVGSHSYRWINYENVPEEVEYEHVKKSILGIQKAspT 158
                      567899999*********************************************************************************9555 PP

                      S----EEE-GGGE..E-HHHHHHHHHTT. CS
  Polysacc_deac_1  95 greprlfryPygs..asatvlevarelgf 121
                      + +pr +     s    + v++v+relg+
       EPX73819.1 159 NTPPRSWYTGRASirTRKIVCQVYRELGL 187
                      55555444333333244445777777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       367  (0.0204696); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.31s 00:00:00.96 Elapsed: 00:00:00.55
# Mc/sec: 1758.84
//
Query:       EPX73820.1  [L=797]
Description: MutL family mismatch-repair protein Pms1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.8e-28   98.1   0.1    9.2e-28   96.9   0.1    1.6  2  MutL_C          MutL C terminal dimerisation domain
    2.3e-24   85.4   0.0    5.2e-24   84.2   0.0    1.7  1  DNA_mis_repair  DNA mismatch repair protein, C-terminal domai
    2.4e-10   40.4   0.5    5.8e-10   39.1   0.5    1.7  1  HATPase_c_3     Histidine kinase-, DNA gyrase B-, and HSP90-l
    4.4e-07   30.4   0.1    1.1e-06   29.1   0.1    1.8  1  HATPase_c       Histidine kinase-, DNA gyrase B-, and HSP90-l


Domain annotation for each model (and alignments):
>> MutL_C  MutL C terminal dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       1.7   7.6e+03      94     121 ..      13      40 ..      11      47 .. 0.71
   2 !   96.9   0.1   2.1e-31   9.2e-28       4     147 .]     614     759 ..     612     759 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 1.7
                 EEEECCCTTTSHHHHHHHHHHHHCCCSS CS
      MutL_C  94 ravPallrqqnleelirelleelaekgk 121
                 + +++    ++l ++++el+e++ ++g 
  EPX73820.1  13 HRICSGQVITDLASAVKELVENALDAGA 40 
                 5566666678888999999999888876 PP

  == domain 2  score: 96.9 bits;  conditional E-value: 2.1e-31
                 EEEEEETTTEEEEEETTEEEEEEHHHHHHHHHHHHHHHHCCHSSB-EEEEEEEEEEE--HHHHHHHHHCHHHHHHCT-EEEE....-STTEEEEEEEEC CS
      MutL_C   4 kalgqvhgtyilaenedglvlvDqhaAherilyeklkeqlkeeelksQpLliPlvlelspeeaalleehkeeLaklGfelee....fgpnslivravPa 98 
                 k++gq++ ++i++ ++++l+++Dqha +e+++ye+lk  +k    ++Q+L++P  l+l + e+ +l eh+e +++ Gfe+      + ++++++ avP+
  EPX73820.1 614 KIVGQFNRGFIVVIHKNNLFIIDQHASDEKFNYERLKDRVKL---RPQELVVPKQLNLAATEEIVLFEHMEMIREKGFEILVnmenPVGKRCKLIAVPS 709
                 579**********************************99999...9********************************975444559************ PP

                 CCTTTSHHHHHHHHHHHHCCCSS.-H-HCCHHHHHHHHCTTSSSSSS--- CS
      MutL_C  99 llrqqnleelirelleelaekgk.esleekleellatmachssvkagrrl 147
                  ++  +   ++ e+l+ l+e+++ + + +kle++la+ ac+ss+++gr l
  EPX73820.1 710 GKSVVFDVGDLLEMLNLLSEHPHiNPISSKLERMLASKACRSSIMIGRAL 759
                 ***********************77799******************9986 PP

>> DNA_mis_repair  DNA mismatch repair protein, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.2   0.0   1.2e-27   5.2e-24       1     117 [.     217     330 ..     217     332 .. 0.91

  Alignments for each domain:
  == domain 1  score: 84.2 bits;  conditional E-value: 1.2e-27
                     HHHHHHHHHHCCEEEEEEEETTEEEEEEEE-CC..G-BTTGGEEEEEETTEEE--HHHHHHHHHHHHCCSSSSSB-EEEEEEEESSGGEE-TSST CS
  DNA_mis_repair   1 iaavlgkevaenlleiekeeeqlkieGfiskpe..lsrskrdkqflfvNgRlvkskelkkaireaYkellpkgrypvvvLnleidpeevDvNvhP 93 
                     i++++g++++++l++++       i+G+is+p+    r ++dkq++f+NgR+++ ++l kai+e++k   + ++ p++++nl++   +vDvNv P
      EPX73820.1 217 IMNLFGTKISSSLIKWQD----GFIDGYISRPHvgSVRLSSDKQMVFINGRPIHLPKLVKAIQEVFK-AYSMSQAPFFAINLTLTEGTVDVNVSP 306
                     578899999999998765....579*******85577888***************************.6677899******************** PP

                     T----EETTHHCHHHHHHHHHHHH CS
  DNA_mis_repair  94 tKreVrfqdeeevieaieealkea 117
                     +Kr+V++++e+++i++++++l+++
      EPX73820.1 307 DKRSVFLSEESTIIDFVRDSLQRL 330
                     ********************9986 PP

>> HATPase_c_3  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.1   0.5   1.3e-13   5.8e-10       4     106 ..      25     128 ..      21     151 .. 0.79

  Alignments for each domain:
  == domain 1  score: 39.1 bits;  conditional E-value: 1.3e-13
  HATPase_c_3   4 ekAlaelvdNsldAdaenvkievnknrgktgeivieDdGkGmseeelknalrlatsskeak.rkstslGkkGi.GlklAslslgkkltvitkke.ges 98 
                   +A+ elv+N+ldA a+++++ +++     ++i i D+G+G+s e+ ++  + + +sk +   + ++l  +G+ G   +sl + +++t++t ++ +  
   EPX73820.1  25 ASAVKELVENALDAGATTIEVRFKNYG--LDSIEILDNGSGISIEDQESIGKKHYTSKIEAfGDLDTLVTFGFrGEAISSLCSVSDVTITTATSlEAP 120
                  79***********************85..69*****************98876666666331578889999998999999999999999998763444 PP

  HATPase_c_3  99 stltldvd 106
                    ++l+++
   EPX73820.1 121 KGTQLKLN 128
                  45666654 PP

>> HATPase_c  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1   0.1   2.6e-10   1.1e-06       4      64 ..      22      86 ..      19     152 .. 0.73

  Alignments for each domain:
  == domain 1  score: 29.1 bits;  conditional E-value: 2.6e-10
                HHHHHHHHHHHHHHHHHHSTTTEEEEEEEEEE.TEEEEEEEESSSSSTTHHHTGTCSTTCH.......H CS
   HATPase_c  4 krLrqiisnlvdNavkfatkageieveikase.ddlvisveDnGiGipkedlkklfekfsq.......d 64
                + L  ++++lv+Na+++   a++iev+ k  + +  +i++ DnG Gi+ ed++ +++k+++       d
  EPX73820.1 22 TDLASAVKELVENALDA--GATTIEVRFK--NyGLDSIEILDNGSGISIEDQESIGKKHYTskieafgD 86
                678899**********6..7999****99..446889****************9999777735554332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (797 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       932  (0.0519828); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.84u 0.37s 00:00:01.21 Elapsed: 00:00:00.57
# Mc/sec: 4213.80
//
Query:       EPX73821.1  [L=706]
Description: anaphase-promoting complex subunit Apc4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.2e-46  157.0   1.5    4.2e-46  157.0   1.5    1.7  2  ANAPC4       Anaphase-promoting complex, cyclosome, subunit 4
    5.2e-22   77.9   0.0    1.3e-21   76.7   0.0    1.7  1  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
     0.0031   17.1   0.0      0.005   16.5   0.0    1.2  1  PQQ_2        PQQ-like domain
  ------ inclusion threshold ------
      0.046   13.9   0.3        0.1   12.8   0.3    1.6  1  Cor1         Cor1/Xlr/Xmr conserved region


Domain annotation for each model (and alignments):
>> ANAPC4  Anaphase-promoting complex, cyclosome, subunit 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.0   1.5   9.3e-50   4.2e-46       2     202 ..     240     440 ..     239     442 .. 0.98
   2 ?   -2.7   0.1      0.75   3.4e+03      26      40 ..     455     469 ..     451     477 .. 0.81

  Alignments for each domain:
  == domain 1  score: 157.0 bits;  conditional E-value: 9.3e-50
      ANAPC4   2 llsldlpflssskkelvelarkssqlqslleyinetlkeiseewkealelldrklrnledelkeegeeeksisaeLldllltGlispalkdfLvnqlge 100
                 l++l +p+l++  +++v++a++s+++q  ++yi+et++++ ee++++++  ++  +++ + ++++++++ s++ eL+++++ G+++p lk++L++++g+
  EPX73821.1 240 LQTLYMPLLENGLRNIVDIATMSTKMQLFVRYIEETVDAMYEEFDNIVKAENSLRNSFTQIFEKQKNNTFSPELELYQFIMNGIPTPILKEWLTERVGD 338
                 6899**************************************************************9999***************************** PP

      ANAPC4 101 rglkkwekavesayenirklvfehllpalerlivllseLrGlakweeryeslgldeeeidelletakslllkaeellqviseelkqfkaFinWlkvvid 199
                 r +k wek++++a+ +++ +++e +lpa erl +ll+ +rG a w  ++++  ld+++id+++++++sl  ++ ++l+ +++e+ q+k+ + Wl++++ 
  EPX73821.1 339 RIIKNWEKLIVNACRSLSTFCQEFILPASERLGILLNLIRGKAIWGVMKGDSLLDPKLIDNCMSSLSSLQALSFTFLSSLQKENTQMKRYVGWLNYAMR 437
                 *************************************************999********************************************998 PP

      ANAPC4 200 rla 202
                 ++ 
  EPX73821.1 438 EFV 440
                 875 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.75
      ANAPC4  26 qlqslleyinetlke 40 
                 ++q+ ++yi+++l++
  EPX73821.1 455 HIQDTVRYIRNSLMH 469
                 789999999998876 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.7   0.0   2.9e-25   1.3e-21       2      91 ..      34     121 ..      33     122 .. 0.98

  Alignments for each domain:
  == domain 1  score: 76.7 bits;  conditional E-value: 2.9e-25
  ANAPC4_WD40   2 swcptmDLiAlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWge 91 
                  s cp+m+L+A++t+ ++l++ R  gq++w++    e+ + ++L+W++dg+lL+v++++ge++++d+++g+vv++ +++++  +t+++W++
   EPX73821.1  34 SLCPSMELLAVITNANRLIALRNTGQKIWDV--GFEGLKATALCWHQDGHLLVVGFENGELKFVDSSTGHVVEQRPASRDIPITMITWTV 121
                  78*****************************..8******************************************************97 PP

>> PQQ_2  PQQ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   1.1e-06     0.005      78     152 ..      41     110 ..      27     125 .. 0.82

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 1.1e-06
       PQQ_2  78 rvvvvasdgqlialdaedGkrlWstqqrseepaelrssaspava..gdtvvvgessgklvaldpkdGkvlWerelaa 152
                  + v ++ ++lial  ++G++ W +  ++      + +++  ++  g+ +vvg+++g+l  +d ++G v+ +r+ ++
  EPX73821.1  41 LLAVITNANRLIALR-NTGQKIWDVGFEG------LKATALCWHqdGHLLVVGFENGELKFVDSSTGHVVEQRPASR 110
                 567899999*****9.********33333......446666666899*************************99865 PP

>> Cor1  Cor1/Xlr/Xmr conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.3   2.3e-05       0.1       2      51 ..     260     309 ..     259     314 .. 0.94

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2.3e-05
        Cor1   2 allakrkrleefvkaslkssnekieqvwktqqeerqklkeeysqqfltlf 51 
                 +++ k++ + ++++++++++ e+++++ k++++ r+ +++ +++q  ++f
  EPX73821.1 260 TMSTKMQLFVRYIEETVDAMYEEFDNIVKAENSLRNSFTQIFEKQKNNTF 309
                 6789*****************************************88877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (706 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       590  (0.0329076); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.77u 0.38s 00:00:01.14 Elapsed: 00:00:00.55
# Mc/sec: 3899.07
//
Query:       EPX73822.1  [L=1208]
Description: U2 snRNP-associated protein Sap130 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   6.5e-130  434.0   0.0     1e-129  433.4   0.0    1.3  1  MMS1_N       Mono-functional DNA-alkylating methyl methanesul
    5.7e-88  295.3   0.0    2.6e-87  293.2   0.0    2.1  2  CPSF_A       CPSF A subunit region
  ------ inclusion threshold ------
      0.081   13.2   0.0         63    4.0   0.0    3.9  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
       0.12   11.7   0.0       0.26   10.7   0.0    1.5  1  HSM3_N       DNA mismatch repair protein HSM3, N terminal dom


Domain annotation for each model (and alignments):
>> MMS1_N  Mono-functional DNA-alkylating methyl methanesulfonate N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  433.4   0.0  2.3e-133    1e-129       1     487 [.      82     619 ..      82     621 .. 0.93

  Alignments for each domain:
  == domain 1  score: 433.4 bits;  conditional E-value: 2.3e-133
      MMS1_N   1 DlLvvgsdsgelvflsynpeknqfetvhshetlgksgsrrsqpGqylavDPkgraiavsayekvflvyslkkkeilnr..ealll.ssplearksegvi 96 
                 D+L+v+sdsg++++l+y+ + n++ +v  +e +gksg+rr +pG+ylavD kgra +v+++ek +lvy      +lnr  ea+l+ ssplea+k+  ++
  EPX73822.1  82 DYLIVTSDSGRITVLQYDLNLNRLVPVY-QEAFGKSGIRRVVPGEYLAVDAKGRAAMVASVEKNKLVY------VLNRdaEADLTiSSPLEAHKAGNIC 173
                 9***************************.***************************************......9999999****************** PP

      MMS1_N  97 lsmvFldpgykeednpiialleqdrrg.............kteltlyewdlglnlvrkisktsepkknldsganlLiplpk....pggvlVcgetiity 178
                 +s+v+ld+gy+   npi+a++e+d  +             ++ lt+ye+dlgln+v++  ++s++   +d+++ +L p+p+    p+g lV++e  + y
  EPX73822.1 174 FSLVGLDTGYA---NPIFAAIEVDYSDidhdhsgqayenvEKVLTYYELDLGLNHVVR--RWSKV---VDRSSYMLLPVPGgndgPSGTLVISEGWVSY 264
                 **********6...9*******5555555555668888899*****************..9*999...*************99999************* PP

      MMS1_N 179 kdildqedirkk...............swarPrrekatn....fv..aweklds.fffllatedGdLylleiekdedsgkvvtsislkyfdtvsvasal 255
                 ++ + q +                    wa P ++++      +v  +++++++ ff+ll+t +GdL +l++e+d +  ++v+++++kyfdt++    l
  EPX73822.1 265 RHLQRQFH--EIpimrrkgnetveaatPWAEPSSKSKGTrlpvIVsaVMHRMKGsFFYLLQTHEGDLLKLTVEHDGQ--GNVNELRMKYFDTIPLSVEL 359
                 ***66554..3233577777777777777777776444499974477*************************99655..79****************** PP

      MMS1_N 256 vilksgfLfvasefGdgqlyqieargedd.............................knleliqtldNlaPilDfkvvkes..dlasegqdqiytcsG 323
                  ilk+gfLf+ +e G++qlyq+e++g dd                             +nl+l+++++ l P++D  vvk+   d    + +qiy+++G
  EPX73822.1 360 NILKTGFLFISCEGGNHQLYQFENLGLDDgeleissleypndslvttgknisyqvrglQNLSLVDEVPCLYPMTDSLVVKSPalD----DPTQIYAICG 454
                 ***************************99**************************************************555332....569******* PP

      MMS1_N 324 agkrgsLrelRsGieveelavseepgspitgvWtlklssedeyddylvlSfvneTlvlsidgdgeveevtedsglllsvpTLaagnlgdgslvQVtpng 422
                 +g+ +sLr l+ G+e++e++ se pg p  ++Wtlkls++d yd+y++lSf n Tlvlsi g+ +veev+ dsgll+sv+TL + ++g++sl+QV+++g
  EPX73822.1 455 RGNASSLRRLKRGLETTEIVASEIPGAP-IAIWTLKLSRNDMYDSYIILSFTNGTLVLSI-GE-TVEEVS-DSGLLSSVSTLNVHQMGQDSLLQVYSKG 549
                 ****************************.*******************************.*9.*****9.**************************** PP

      MMS1_N 423 irliradkrvsewkppngksiiaaaangeqllvalsgrelvyfel.d......lieevekkdleslsevscl 487
                 ir+ir++k +sewk+p    i+  ++n++q+++al+++elvyfe+ d      l+e++e+k+l    +v+ l
  EPX73822.1 550 IRHIRSNKQISEWKLPADLFITQSTINETQIVIALNNGELVYFEMsDdveggqLNEYQERKTLT--ANVTAL 619
                 ****************988**************************7479999999999999998..777766 PP

>> CPSF_A  CPSF A subunit region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.25   1.1e+03     188     205 ..      82      99 ..      33     157 .. 0.80
   2 !  293.2   0.0   5.8e-91   2.6e-87       2     321 ..     857    1175 ..     856    1176 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.25
                 SEEEEEETTSEEEEEE-- CS
      CPSF_A 188 dtvlvaDkfgnlfvlryd 205
                 d+++v+ ++g ++vl+yd
  EPX73822.1  82 DYLIVTSDSGRITVLQYD 99 
                 566677777777777776 PP

  == domain 2  score: 293.2 bits;  conditional E-value: 5.8e-91
                  -EEEEE-T..TT-EEEEE--TTEEEEEEEE--B-SSTTT---B--EEEEEEE---SSS--E..EEEEEEEEEE-SS--EEEEEEEEEEEES----EE CS
      CPSF_A    2 ssiklvdpiskeeidsleLeenEavlsvksvelessettkekkellvVGtafnlgedpaars.GrilvfeiievpetnrkLklvhkeevkgavtala 97  
                  s ++++d +sk+ +++ +L +nEa+++v++v+++s     + + +lv G+a+n   + +a s G+i+v+++++++    +L+lv  +e+++++ +l 
  EPX73822.1  857 SYVSIFDLKSKQMVHTCKLGDNEAAFCVEMVHFKS-----KDELFLVTGSATNVNLESRACShGNIRVYRLKDEG---ASLELVSHTETDDIPMCLR 945 
                  789*****9999*********************84.....3489*********9999966669**********75...5****************** PP

                  EETTEEEEE-SSEEEEEEE-TTS-EEEEEEEE-SS..-EEEEEEETTEEEEEESSS-EEEEEE-SSS--EEEEEEESS---EEEEEEE--SSSEEEE CS
      CPSF_A   98 efqGrllvgvgqkvrvydlgedktLlrkafldtql..yvvslkvlgnriivgDlmkSvtfveydeenyklilfardtqkrwvtaaeflvdgedtvlv 192 
                  +fqGr+l+gvg+ +r+y+lg++k +lrk+++ +++  +++ l v+g+riivgD++ S+ +v y+ + +++ +fa+d  +rw+t+  ++ d+ dtv++
  EPX73822.1  946 PFQGRMLAGVGKYLRIYELGNKK-VLRKCEI-APVplFITRLDVQGSRIIVGDSQCSIRYVVYKHDENRFLVFADDPIQRWCTTSIMV-DY-DTVAG 1038
                  ***********************.*******.66668****************************5555*******************.**.9**** PP

                  EETTSEEEEEE--TTSGGGTTTT..................EEEEEEEEE-SS----E...EEEE.SSS--S-EEEEEE-TTS-EEEEEE.--HHHH CS
      CPSF_A  193 aDkfgnlfvlrydpeasessdgdp.................rleeraefhlgeivtslrkgslvpgeaesssspqllyatldGsigllvPliseeey 272 
                  +Dkfgnl++lr++ ++s  sd+++                 +le  ++f++++i+ts++k++lv+g++e+     ll+++l G++g+++P+i++e++
  EPX73822.1 1039 GDKFGNLWLLRCPADVSRLSDEENsaskllhekpflnstphKLELLSHFYTNDIPTSMKKVQLVEGAREV-----LLWTGLLGTVGVFTPFINQEDV 1130
                  ***********************9**********************************************.....********************** PP

                  HHHHHHHHHHHHHS--SSS--HHHHS---..----.---EEHHHHHHHH CS
      CPSF_A  273 rrlqaLqqqLrkelkhlgGldhrafRsyyspkseevkgviDgdllerfl 321 
                  r++q+++  Lrke++ l G+dh+a+Rsyy+p    vkgviDgdl+e ++
  EPX73822.1 1131 RFFQQIEFFLRKEVPMLSGRDHLAYRSYYAP----VKGVIDGDLCETYY 1175
                  *******************************....*************8 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0         4   1.8e+04      50      77 ..     124     151 ..     117     158 .. 0.79
   2 ?    4.0   0.0     0.014        63      50      82 ..     631     663 ..     606     676 .. 0.86
   3 ?    3.9   0.0     0.015        68      61      87 ..     858     887 ..     855     892 .. 0.79
   4 ?   -2.3   0.0       1.3   5.8e+03      27      57 ..     990    1017 ..     979    1023 .. 0.68

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 4
  ANAPC4_WD40  50 gklLavaysdgevrlldaesgkvvhsls 77 
                  g+ Lav  +  +  + ++e+ k+v  l+
   EPX73822.1 124 GEYLAVDAKGRAAMVASVEKNKLVYVLN 151
                  7788888888888888999999887765 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.014
  ANAPC4_WD40  50 gklLavaysdgevrlldaesgkvvhslsvksek 82 
                   ++L+ a++d +vr+l+    ++++slsv++ +
   EPX73822.1 631 SNFLCLACDDATVRVLSLDLYTTLESLSVQALS 663
                  689***************999999999988765 PP

  == domain 3  score: 3.9 bits;  conditional E-value: 0.015
  ANAPC4_WD40  61 evrlldaesgkvvhslsvksek...avtcl 87 
                   v+++d +s+++vh+++ ++++   +v ++
   EPX73822.1 858 YVSIFDLKSKQMVHTCKLGDNEaafCVEMV 887
                  699****************99944445555 PP

  == domain 4  score: -2.3 bits;  conditional E-value: 1.3
  ANAPC4_WD40   27 qrvwtleedkedsevrsLaWkpdgklLavay 57  
                    r+  +   +++ ++r + +k+d++ + v  
   EPX73822.1  990 SRIIVG---DSQCSIRYVVYKHDENRFLVFA 1017
                   355555...7889999999999998776655 PP

>> HSM3_N  DNA mismatch repair protein HSM3, N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   5.8e-05      0.26      78     113 ..     775     810 ..     770     815 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 5.8e-05
      HSM3_N  78 ssfedvlevysvddlvkalkseidslvvaackviek 113
                 +  ++vl+++++d lv+ lksei +l+ +  k++++
  EPX73822.1 775 AVHQNVLKIFTIDSLVDDLKSEIYPLMCTPRKLVKH 810
                 45689*********************9999888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1208 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       391  (0.0218082); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.77u 0.33s 00:00:01.10 Elapsed: 00:00:00.49
# Mc/sec: 7473.30
//
Query:       EPX73823.1  [L=287]
Description: 40S ribosomal protein S0B [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.3e-27   96.4   0.4    2.7e-13   49.6   0.2    2.2  2  Ribosomal_S2  Ribosomal protein S2
    2.2e-07   32.1  13.5    3.8e-07   31.4  13.5    1.4  1  40S_SA_C      40S ribosomal protein SA C-terminus


Domain annotation for each model (and alignments):
>> Ribosomal_S2  Ribosomal protein S2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.8   0.0   4.5e-16     4e-12       1      98 [.      21     116 ..      21     120 .. 0.92
   2 !   49.6   0.2   3.1e-17   2.7e-13     144     212 ..     117     185 ..     114     187 .. 0.93

  Alignments for each domain:
  == domain 1  score: 45.8 bits;  conditional E-value: 4.5e-16
  Ribosomal_S2   1 LLeagvhfGhqtrrwnpkmkpyIyger.ngihiidlektlaalrraykvvkevaakggkilfvgtkkqakeavkeaakrangyyvnerWlgGtLTNf 96 
                   LL+a +h+G   ++ + +m+py+ ++r +gihi++l kt ++l  a++++  ++++   +  v+t+   ++av + a+ +++  +  r+++G +TN+
    EPX73823.1  21 LLAADCHIGS--KNLEVRMEPYVWKRRsDGIHILNLGKTWEKLVLAARIIA-TIENPADVCVVSTRAYGHRAVLKFAAHTGATAIAGRFTPGNFTNY 114
                   89*******5..677999******999459*******************98.67899***************************************8 PP

  Ribosomal_S2  97 kt 98 
                    t
    EPX73823.1 115 IT 116
                   65 PP

  == domain 2  score: 49.6 bits;  conditional E-value: 3.1e-17
  Ribosomal_S2 144 kmkklPdlvvvldpkkekiavkEakklgipviaivDtnvdpdlvdypIpaNddsirsiklilgvladai 212
                   +  + P l++v+dp+ +  a++Ea+ ++ipvia+ Dt++  + vd +Ip N++ +++i l   +la+ +
    EPX73823.1 117 RTYREPRLIIVTDPRADAQAIREASFVNIPVIALADTDSCLNHVDVAIPTNNKGYKAIGLNWYLLAREV 185
                   55688******************************************************9999998876 PP

>> 40S_SA_C  40S ribosomal protein SA C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4  13.5   4.3e-11   3.8e-07       1      94 [.     205     286 ..     205     287 .] 0.65

  Alignments for each domain:
  == domain 1  score: 31.4 bits;  conditional E-value: 4.3e-11
    40S_SA_C   1 fFYRdPEeiekeeqaaaekalvkkeeqeewtapveftepevadWaeegvavpsvpaaaaaaaaevkaaedwsaqpatedWsaaptaaaeatseW 94 
                 +FYRdPEe+e+ee a+a +a++++ee ++ +a ++++e ev+d a  g+  p+v  +a+a       ++ w+ ++   +W+++ +    a seW
  EPX73823.1 205 YFYRDPEEVEREEEAKAAAAAAAEEE-AQLAAQTAAAEFEVNDSA-AGTVDPTVLDNATAG---QVGQTTWEGDA---EWNTTGA----APSEW 286
                 9*************999999777766.666655555666777777.666666666666555...33445666665...6763222....23344 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (287 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       710  (0.0396006); expected 358.6 (0.02)
Passed bias filter:                      426  (0.0237604); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.29s 00:00:00.83 Elapsed: 00:00:00.47
# Mc/sec: 1830.07
//
Query:       EPX73824.1  [L=2312]
Description: HisK/Mak2 protein kinase Mak2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      1e-26   93.6   0.0      3e-26   92.1   0.0    1.9  1  HATPase_c     Histidine kinase-, DNA gyrase B-, and HSP90-lik
      8e-22   77.5   0.0    2.6e-21   75.9   0.0    2.0  1  Response_reg  Response regulator receiver domain
    6.3e-16   58.2   0.1      3e-15   56.0   0.0    2.3  2  HisKA         His Kinase A (phospho-acceptor) domain
    9.9e-12   44.8   0.0      5e-11   42.5   0.0    2.1  2  Pkinase       Protein kinase domain
    3.4e-09   37.3   0.0    9.9e-09   35.8   0.0    1.8  1  AAA_16        AAA ATPase domain
    5.1e-07   30.4   0.0    1.2e-06   29.2   0.0    1.7  1  GAF           GAF domain
    9.2e-07   29.2   0.0      2e-06   28.1   0.0    1.6  1  GAF_2         GAF domain
    3.4e-05   23.2   0.0    9.1e-05   21.9   0.0    1.6  1  Pkinase_Tyr   Protein tyrosine kinase
    0.00011   22.6   0.0    0.00022   21.6   0.0    1.6  1  GAF_3         GAF domain
    0.00018   21.4   0.0    0.00071   19.5   0.0    2.1  1  NACHT         NACHT domain
  ------ inclusion threshold ------
      0.046   12.8   0.1      0.093   11.8   0.1    1.4  1  T2SSE         Type II/IV secretion system protein
      0.061   12.5   0.0       0.25   10.5   0.0    2.0  1  NB-ARC        NB-ARC domain
      0.071   13.4   0.0       0.29   11.4   0.0    2.1  1  AAA_22        AAA domain
      0.074   12.9   0.0        0.3   11.0   0.0    2.1  1  TPR_1         Tetratricopeptide repeat
      0.086   13.3   0.5       0.32   11.5   0.0    2.2  1  ABC_tran      ABC transporter
       0.11   11.8   0.1       0.93    8.7   0.0    2.2  2  Zeta_toxin    Zeta toxin
       0.12   12.6   0.1        4.2    7.8   0.0    3.3  3  TPR_8         Tetratricopeptide repeat
       0.12   12.6   0.0       0.25   11.6   0.0    1.5  1  AAA_28        AAA domain
       0.12   12.6   0.0       0.38   11.1   0.0    1.8  1  AAA_19        AAA domain
       0.13   11.5   0.0       0.24   10.6   0.0    1.4  1  DUF2075       Uncharacterized conserved protein (DUF2075)
       0.13   12.5   0.0       0.56   10.5   0.0    2.2  1  PAS_9         PAS domain
       0.14   11.9   1.8       0.17   11.6   0.1    2.0  1  AAA_29        P-loop containing region of AAA domain


Domain annotation for each model (and alignments):
>> HATPase_c  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.1   0.0   3.7e-29     3e-26       1     111 [.    1868    1986 ..    1868    1987 .. 0.92

  Alignments for each domain:
  == domain 1  score: 92.1 bits;  conditional E-value: 3.7e-29
                  EHHHHHHHHHHHHHHHHHHHHSTTTEEEEEEEE...EE.....TEEEEEEEESSSSSTTHHHTGTCSTTCH.HCSTCHTSTSSSHHHHHHHHHHHHT CS
   HATPase_c    1 gdekrLrqiisnlvdNavkfatkageieveika...se.....ddlvisveDnGiGipkedlkklfekfsq.ddstkrggggtGlGlsivkklvelm 88  
                  gd  +Lrq+i nl++N++kf tk+g+i ++++    ++      +l +++eD+GiG+ +e++k+lf++f+q d+st+r +gg+GlGlsi+ ++++ m
  EPX73824.1 1868 GDIAKLRQVITNLLGNSAKF-TKEGHILLRCSIkddPKlsdadCYLYFEIEDTGIGLKPEQMKLLFKPFTQvDGSTTRIYGGSGLGLSICLEICKIM 1963
                  68899***************.******88888754511555678***************************************************** PP

                  TTEEEEEEETTTEEEEEEEEESS CS
   HATPase_c   89 gGeiwvesepgrGttftftlple 111 
                  +G+i ves  ++G+tf+f+++l+
  EPX73824.1 1964 DGNIGVESVYDEGSTFWFYVRLS 1986
                  *******************9886 PP

>> Response_reg  Response regulator receiver domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.9   0.0   3.2e-24   2.6e-21       2     111 ..    2185    2302 ..    2184    2303 .. 0.93

  Alignments for each domain:
  == domain 1  score: 75.9 bits;  conditional E-value: 3.2e-24
                    EEESSSHHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHH...ESEEEEESSCSSSEHHHHHHHHHHCT.TT.....SEEEEEESSTSHHHHH CS
  Response_reg    2 livdDdplvrellrqlleeegyeevaeaedgkealellkeek...vdlillDinmpgmdGlellkeireed.pe.....lpviiltahseeedav 87  
                    li++D+ ++r+ll+++l++ g+ ev++++dg+e++e++k++    +++i+ D  mp +dG e++++ir+ + ++     +pvi+lta  +++ ++
    EPX73824.1 2185 LIAEDNLIARKLLSKQLTNLGL-EVETVNDGQELVEIFKSKPhgyYGIIFADYHMPICDGAEAVSKIRAYEnSQntgnyVPVIALTADIQKSAKQ 2278
                    8*********************.***************9998899**********************998862145666**************** PP

                    HHHHCTESEEEESSG-HHHHHHHH CS
  Response_reg   88 ealkagaddflsKpfdpeeLlkal 111 
                    ++l++g++d+l+Kpf++++L  ++
    EPX73824.1 2279 KCLDVGMNDYLTKPFTQQQLQGMI 2302
                    ********************9877 PP

>> HisKA  His Kinase A (phospho-acceptor) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.0   0.0   3.7e-18     3e-15       2      67 .]    1756    1820 ..    1755    1820 .. 0.97
   2 ?   -2.4   0.0       6.2   5.1e+03      33      52 ..    2039    2058 ..    2025    2059 .. 0.83

  Alignments for each domain:
  == domain 1  score: 56.0 bits;  conditional E-value: 3.7e-18
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHC..T-HSSCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH CS
       HisKA    2 lgrflagvaHELrtPLsailgnaeaLkregklteelkeyletiesearrldhlvedlLdlsrieag 67  
                  +  fla+++HELrtP s+ +g++++L+++ kl++e+ + + t++++   l ++++dlL +s +e+g
  EPX73824.1 1756 KANFLASMSHELRTPFSSFYGMLSLLSDT-KLSDEQHDIVSTAKQSCTSLVQIIDDLLNFSELESG 1820
                  678*************************6.*********************************997 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 6.2
                  -HSSCHHHHHHHHHHHHHHH CS
       HisKA   33 lteelkeyletiesearrld 52  
                   t +l +++eti  ea++++
  EPX73824.1 2039 KTVQLTKNVETILLEAQQIN 2058
                  46788999999999999986 PP

>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.5   0.0   6.1e-14     5e-11      16     254 ..      41     282 ..      37     298 .. 0.86
   2 ?   -1.3   0.1       1.3   1.1e+03     186     244 ..    1583    1640 ..    1581    1665 .. 0.71

  Alignments for each domain:
  == domain 1  score: 42.5 bits;  conditional E-value: 6.1e-14
                 EEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHHHHHHHHHHHHHHHHH CS
     Pkinase  16 ykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseeeakkiakqilegleyl 114
                 +ka++ket+k v++K   +  + +++   +lr ++ + k ++  i+  y+ + +k+  +l+++    + ++d+l++++ ++ +   k+a   ++ l+++
  EPX73824.1  41 VKALHKETNKNVVLKFSLQIAKLENEY-FLLRQLSSFSKGDSYTILPRYRLLLNKSMGVLIFDDPGPDLVKDWLSDSRPVDLRLFYKFALAACHTLSFM 138
                 6899***********998887777665.89********************************************************************* PP

                 HHTTEE-SS-SGGGEEEETTTE..EEE-SGTTSEESSSSCS..........BCTTTSCGGGS-HHHH..TTSCBSHHHHHHHHHHHHHHHHHSS-STTT CS
     Pkinase 115 HskgiiHrDlKpeNiLidekge..lKitDFGlakelesssk..........ltsfvgtseYlAPEvl..keneyskkvDvWslGvilyelltgkppfsg 199
                 H+k+++H  + p+ + +++++    K+   G +    + +           ++++    ++ +PE +   +++ ++ +D++slGv++y llt++ p+ g
  EPX73824.1 139 HDKQFVHGEIRPDSFHYNTDNSiyAKLLTIGTSVSPIRFTLsslnwqklyqVDDIRHKLQFFSPEQIgsVGRPLDSRSDIYSLGVTFYVLLTKCYPWGG 237
                 ******************77777889988888866554443456788888899**************6556899************************6 PP

                 SSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTT CS
     Pkinase 200 ekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRlt 254
                 +  +  ++ +++q   +  +l        ++ +++  + +l++++ +k  ++R++
  EPX73824.1 238 KPMRIVQSIHTRQ---FPSVL-------SRRPDVPIALDQLIQRMTTKSIEERYS 282
                 6666555555555...44444.......567888999999999999999999988 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 1.3
                  HHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHH CS
     Pkinase  186 ilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkl 244 
                  i+++ll+++   s  ++   +++  ++++  + +++ ++ ++++ ++i+e+++ ll++l
  EPX73824.1 1583 IFLKLLSQQIAIS-ISNALLFQNLRHTITDNVSLIESQQISYQRYKNIEEQCITLLDSL 1640
                  6666666666666.3333334444445677777888999*****************987 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.8   0.0   1.2e-11   9.9e-09      24     161 ..     379     550 ..     364     557 .. 0.80

  Alignments for each domain:
  == domain 1  score: 35.8 bits;  conditional E-value: 1.2e-11
      AAA_16  24 pelvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipysalaqalareellrqlldeaesaeleawrekleeala................ 106
                 ++++ ++G sG+GK++l+++++ +++k  g+f+ + ++    a p+s + ++    ++lrq+l+e+ ++  ++++   e  l+                
  EPX73824.1 379 CHIITVTGGSGSGKTTLLQSIAVEARKF-GYFALCSFQNI-HASPFSGVFDCV-S-QVLRQVLREEMETVINYFSSLWEF-LGeelvymgplfecvpel 472
                 38999*****************777766.9*********9.777*********.6.9********888888887773332.335777999********* PP

      AAA_16 107 .......................avpelagaea.srllellkrllallsrderplvlvlDdlqwadeaslqllaaLlrl 161
                                        + +el++a+    +   l ++l+++ r  r +++vlDdl+ ad  s +l++ + ++
  EPX73824.1 473 nyllspkynyhckhenyikfkprDPQELRSASGrLGFIVCLLEILSFTCR-IRSTIIVLDDLHLADGCSISLIRGIIAR 550
                 ******************99987555555555556666666677755555.555************9999998877665 PP

>> GAF  GAF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.2   0.0   1.4e-09   1.2e-06       3     133 .]    1456    1596 ..    1454    1600 .. 0.70

  Alignments for each domain:
  == domain 1  score: 29.2 bits;  conditional E-value: 1.4e-09
                  HHHHHHHHHHHHHHHTESEEEEEE........EEETTEEE.......CEEEEECC..EEEETTSHHHHHHHHHSSSEEESTGG..TSTTHHTTHHHH CS
         GAF    3 eelldtvveelrellgadrvalyl........pdydGlhy.......dipqasrw..lfmkngrgicgqvlatgqplvipdst..pdprfaqynrrd 80  
                    ll tv++ + e+ ++d +a+ l        + +    +        +++a+    + +k ++ +  +v+++ + +++++++  +d++  +     
  EPX73824.1 1456 ASLLTTVIKLIIEYSQVDFAAVILksdsqfvlS-A----FgnstyseALEPALPLceSDIKIPEIVLSEVFTNSRMVTLEGVSksEDEDVIN----W 1543
                  6799******************98555555531.3....03332355344444445466666777777************955345555444....5 PP

                  HHHHTTESEEEEEEEEETTEEEEEEEEEESSS..CSHHHHHHHHHHHHHHHHHHH CS
         GAF   81 llenmgirsslvvPlvndgelwGllvlhnpsp..pftreelellqvladqvaval 133 
                  l+e+++ +s++ +Pl  ++ ++G+l+l  p++  +     + +l+ l++q+a+++
  EPX73824.1 1544 LQEEHNLNSFIIIPLQFKDTVIGALYLQLPRNlmH--FGNVIFLKLLSQQIAISI 1596
                  7799****************************555..555555555555555543 PP

>> GAF_2  GAF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.1   0.0   2.5e-09     2e-06       3     137 ..    1454    1596 ..    1452    1597 .. 0.74

  Alignments for each domain:
  == domain 1  score: 28.1 bits;  conditional E-value: 2.5e-09
                  HHHHHHHHHHHHHHHS.S..EEEEEEE-TTS-EEEE.....EEEES-TTSTT-S-B--..-TTHHHHHHHHTS-EEES-GGG..-S-HHHHHHHHHT CS
       GAF_2    3 dleelldlvldelvel.gaalgyillvdddgglrla.....awgeaeeefgaaldrpl..geglvgealrtgrpvilndlee..dpdkkglpaghag 89  
                   l +ll +v++ ++e  +++++ + l  d  +++l+     +++ea e     +++++   e ++ e++ + r v l+ +    d+d +++ +++++
  EPX73824.1 1454 RLASLLTTVIKLIIEYsQVDFAAVILKSD-SQFVLSafgnsTYSEALEPALPLCESDIkiPEIVLSEVFTNSRMVTLEGVSKseDEDVINWLQEEHN 1549
                  57899**********95699776666443.77777755544333333333333333334244469999999*******9444479************ PP

                  T--EEEEEE-TTS---EEEEES......--HHHHHHHHHHHHHHHHHH CS
       GAF_2   90 lrsflavPlisegrvvGvlnlyankppafdeedlelLeelaeqiaiai 137 
                  l+sf+++Pl  ++ v+G+l l+   ++     ++ +L++l++qiai i
  EPX73824.1 1550 LNSFIIIPLQFKDTVIGALYLQ-LPRNLMHFGNVIFLKLLSQQIAISI 1596
                  *********66568******93.44444678**************987 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.0   1.1e-07   9.1e-05      23     249 ..      44     280 ..      35     285 .. 0.77

  Alignments for each domain:
  == domain 1  score: 21.9 bits;  conditional E-value: 1.1e-07
                  TTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHH CS
  Pkinase_Tyr  23 ekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekekltlkdllsfalqvAkGmeyLe 120
                   +++++ +V++K   + a+ e++  ll++++ ++k +   i+  + + ++++  +++++      +++ L ++  ++++l+  ++fal  ++ +++++
   EPX73824.1  44 LHKETNKNVVLKFSLQIAKLENEYFLLRQLSSFSKGDSYTILPRYRLLLNKSMGVLIFDDPGPDLVKDWLSDS--RPVDLRLFYKFALAACHTLSFMH 139
                  4678889999999999999999999999999999999999999999999888888888876666777888886..9********************** PP

                  HTTEEEST-SGGGEEEEE...........TTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE..EEHHHHHHHHHHHHHHHHTTSSGT CS
  Pkinase_Tyr 121 skklvHrdlaarNvLlse...........nkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk..ftsksDvWsfGvllwEiftlgesp 205
                  +k++vH +++      ++           ++ v    f L++     ++ ++ ++ +  +++ +pE + +    + s+sD++s Gv+ + ++t++  p
   EPX73824.1 140 DKQFVHGEIRPDSFHYNTdnsiyaklltiGTSVSPIRFTLSSLN--WQKLYQVDDIRHKLQFFSPEQIGSVGrpLDSRSDIYSLGVTFYVLLTKCY-P 234
                  *********98776666645555445544555555567777765..6666778889999*********987667*****************99553.3 PP

                  TTTSHHHHHHHHHHTTEE...S-BBTTSBHHHHHHHHHHT-SSGGGS CS
  Pkinase_Tyr 206 ypglkneevleklkegkr...lekpekcpeelyelmkkcweedpeeR 249
                  + g k++++++ +++++    l++  ++p +l +l+++  +++ eeR
   EPX73824.1 235 W-GGKPMRIVQSIHTRQFpsvLSRRPDVPIALDQLIQRMTTKSIEER 280
                  3.336666666665544323366777777888888888777777777 PP

>> GAF_3  GAF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   2.7e-07   0.00022       4     129 .]    1457    1598 ..    1454    1598 .. 0.63

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 2.7e-07
       GAF_3    4 ellekllkllvkllgaevgalllldedgnklqvaagwdgkpalsesldedsalarralssgevvse..............psfaeedg.......lp 79  
                   ll +++kl+ +  +++++a+ +l  d +++  a   +g+   se+l+ + +l+   ++  e+v                 ++++ed        ++
  EPX73824.1 1457 SLLTTVIKLIIEYSQVDFAAV-ILKSDSQFVLSA---FGNSTYSEALEPALPLCESDIKIPEIVLSevftnsrmvtlegvSKSEDEDVinwlqeeHN 1549
                  677888888888888888888.445453333222...345555555555555555333333322221222223333334333333333455555489 PP

       GAF_3   80 draalavPLvagrqviGvlalastkprafdaedlelleslArqiataier 129 
                  +++ +++PL+ +++viG l+l+ +++  +   ++ +l+ l++qia++i++
  EPX73824.1 1550 LNSFIIIPLQFKDTVIGALYLQLPRNL-MHFGNVIFLKLLSQQIAISISN 1598
                  9**********************9977.999*****************97 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   8.7e-07   0.00071       2      78 ..     381     453 ..     380     463 .. 0.79

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 8.7e-07
                 CEEEEC-TTTCHHHHHHHHHHHHCTS-SCCCC-SEEEEEETTTTTTS-...-HCHHHCCCCTS--SSS-CCHHHHCC CS
       NACHT   2 lvilqGeaGsGKTtLlqklalawaegklpqgafklvFflslrelsrsgnarsladllfsqlpepaapvsevwavlle 78 
                 ++ ++G +GsGKTtLlq++a+++++  +++    l  f + ++ + sg + ++ ++l+++l e+ ++v ++++ l+e
  EPX73824.1 381 IITVTGGSGSGKTTLLQSIAVEARKFGYFA----LCSFQNIHASPFSGVFDCVSQVLRQVLREEMETVINYFSSLWE 453
                 6789******************99988665....5566677777777777778888888888877777777777776 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   0.00011     0.093     130     150 ..     380     400 ..     348     406 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00011
       T2SSE 130 glilvsGgTgsGKttllyall 150
                  +i v+Gg gsGKttll ++ 
  EPX73824.1 380 HIITVTGGSGSGKTTLLQSIA 400
                 5788*************8775 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0    0.0003      0.25      20      43 ..     379     402 ..     358     449 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.0003
                 SEEEEEEESTTSSHHHHHHHHCCS CS
      NB-ARC  20 slvvalvGmgGvGKttlakqilnk 43 
                   ++++ G  G+GKttl+++i  +
  EPX73824.1 379 CHIITVTGGSGSGKTTLLQSIAVE 402
                 469*****************9877 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00036      0.29       4      27 ..     378     401 ..     375     460 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00036
      AAA_22   4 tagilvvtGesGtGKTtllrrlle 27 
                 ++ i++vtG sG+GKTtll+ ++ 
  EPX73824.1 378 YCHIITVTGGSGSGKTTLLQSIAV 401
                 5679***************98875 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00037       0.3       3      31 ..    1268    1296 ..    1267    1299 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00037
                  HHHHHHHHHHHTT-HHHHHHHHHHHHHHS CS
       TPR_1    3 alynlGnayfklgkydeAleyyekALeln 31  
                  +++  G+++++ g++  A + +e+A+ ++
  EPX73824.1 1268 VYFLQGMIFRNEGDFMNAAKNFERAVDVE 1296
                  69999********************9876 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0    0.0004      0.32      12      34 ..     380     402 ..     369     415 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.0004
                 SEEEEEESTTSSHHHHHHHHTTS CS
                 xxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  12 ekvaivGenGaGKStLlkllagl 34 
                 +++ ++G +G+GK+tLl+ +a +
  EPX73824.1 380 HIITVTGGSGSGKTTLLQSIAVE 402
                 578899*************9876 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.0    0.0011      0.93       2      40 ..     364     403 ..     363     410 .. 0.83
   2 ?    0.2   0.0      0.48   3.9e+02     154     177 ..    1992    2015 ..    1982    2034 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0011
  Zeta_toxin   2 dellkdkk.ypsqerPklillgGqpGAGKselaellkdel 40 
                 ++l+k+++   +  +  +i + G++G+GK++l++ ++ e 
  EPX73824.1 364 KHLFKNSSvQNEATYCHIITVTGGSGSGKTTLLQSIAVEA 403
                 577888886666689999****************999886 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.48
  Zeta_toxin  154 vpkeehdeafeglresvealeeek 177 
                   + e+++e+++++++ +eal+++ 
  EPX73824.1 1992 LSREHFKETHQNFARIIEALKSTR 2015
                  578999*************99876 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0         6   4.9e+03       7      26 ..     853     872 ..     848     873 .. 0.87
   2 ?    7.8   0.0    0.0051       4.2       3      29 ..    1268    1294 ..    1268    1296 .. 0.94
   3 ?   -0.2   0.1       1.9   1.5e+03      12      33 ..    1737    1758 ..    1735    1759 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 6
                 HHHHHHHTT-HHHHHHHHHH CS
       TPR_8   7 lgsiylklgdyeeAkeyyek 26 
                 ++++y+  +d ++A + ++k
  EPX73824.1 853 MAMCYWWNKDNKNAFAILRK 872
                 68999999*******99998 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0051
                  HHHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_8    3 ayynlgsiylklgdyeeAkeyyekale 29  
                  +y++ g+i ++ gd+ +A + +e+a++
  EPX73824.1 1268 VYFLQGMIFRNEGDFMNAAKNFERAVD 1294
                  69***********************97 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 1.9
                  HHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   12 lklgdyeeAkeyyekaleldpd 33  
                  ++ +d +eA e+  +a+ l+ +
  EPX73824.1 1737 IDINDEKEAREAAIRAVNLKAN 1758
                  6889*************99876 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0    0.0003      0.25       2      22 ..     382     404 ..     381     442 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.0003
      AAA_28   2 ivitGgestGKTtlleaLa..ar 22 
                 i +tGg+++GKTtll+ +a  ar
  EPX73824.1 382 ITVTGGSGSGKTTLLQSIAveAR 404
                 789*************9996544 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00046      0.38       9      33 ..     378     402 ..     369     416 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00046
      AAA_19   9 kekvllvtaGpGtGKTrvlkhival 33 
                   +++ vt+G G+GKT++l+ i  +
  EPX73824.1 378 YCHIITVTGGSGSGKTTLLQSIAVE 402
                 556899*************988655 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0    0.0003      0.24       2      50 ..     380     440 ..     379     448 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.0003
     DUF2075   2 avvlVtGvaGtGKtvvllnllael............eddeeertavylsvNhplvlvlrea 50 
                 +++ VtG++G+GKt +l ++++e+            + +++  + v+  v++ l++vlre+
  EPX73824.1 380 HIITVTGGSGSGKTTLLQSIAVEArkfgyfalcsfqNIHASPFSGVFDCVSQVLRQVLREE 440
                 6899******************996666666655533334444555556666666666655 PP

>> PAS_9  PAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00069      0.56       7     103 ..    1648    1740 ..    1641    1741 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00069
       PAS_9    7 dnpdgrilyaNeaalrllGyspeevlgksitdlfvtdpeanerlraaleqgrkkerevevvlirkngetfwvlltaspvkdddgelvgiivilrDit 103 
                  d + g+i++ N +  + +G+   +    s++ ++  +pe +  +++ le+++++e+ +   l +k+g+  w l++  p++ ++  ++ +iv+++Di 
  EPX73824.1 1648 DSKIGEIEFTNASKHDYFGTVDTD-GSLSWKKFI--HPEQHTIFQKKLENLKSEEFGELELLLKKSGSFHWHLCRGLPLQRGS-SNTKWIVVCIDIN 1740
                  667788999999999999955455.466799999..9999999999999999888888888888999999999******7654.556699*****96 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   0.00021      0.17      24      42 ..     381     399 ..     363     402 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00021
      AAA_29  24 atlltGpsGsGKSTllDAi 42 
                 ++ +tG sGsGK+Tll +i
  EPX73824.1 381 IITVTGGSGSGKTTLLQSI 399
                 5679***********9776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2312 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       633  (0.0353059); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        85  (0.00474092); expected 17.9 (0.001)
Passed Fwd filter:                        22  (0.00122706); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              22  [number of targets reported over threshold]
# CPU time: 1.15u 0.34s 00:00:01.49 Elapsed: 00:00:00.54
# Mc/sec: 12923.33
//
Query:       EPX73825.1  [L=339]
Description: DNA replication factor C complex subunit Rfc3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.5e-20   71.1   0.8      3e-19   69.2   0.1    2.4  2  Rep_fac_C        Replication factor C C-terminal domain
      6e-18   65.5   0.0    1.2e-17   64.6   0.0    1.5  1  AAA              ATPase family associated with various cellul
    2.3e-17   63.2   0.2      3e-13   49.9   0.2    2.7  3  DNA_pol3_delta2  DNA polymerase III, delta subunit
    9.7e-10   38.7   0.0    2.1e-09   37.6   0.0    1.6  1  Rad17            Rad17 P-loop domain
    6.9e-06   26.3   0.0    1.7e-05   25.0   0.0    1.8  1  AAA_assoc_2      AAA C-terminal domain
    3.9e-05   22.9   0.0    6.9e-05   22.1   0.0    1.4  1  DUF815           Protein of unknown function (DUF815)
    0.00011   22.0   0.0     0.0019   18.0   0.0    2.2  2  AAA_30           AAA domain
    0.00016   21.6   0.3     0.0016   18.3   0.0    2.1  2  AAA_11           AAA domain
    0.00033   21.1   0.0    0.00056   20.3   0.0    1.7  1  AAA_16           AAA ATPase domain
    0.00035   20.9   1.1       0.58   10.4   0.1    2.8  3  AAA_22           AAA domain
    0.00039   20.2   0.5     0.0014   18.4   0.2    1.9  2  DNA_pol3_delta   DNA polymerase III, delta subunit
    0.00041   20.4   0.1     0.0015   18.6   0.0    1.9  2  AAA_14           AAA domain
    0.00071   19.3   0.0     0.0015   18.3   0.0    1.5  1  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
     0.0015   18.3   0.0     0.0025   17.6   0.0    1.4  1  AAA_24           AAA domain
     0.0022   18.3   0.2      0.013   15.8   0.2    2.1  1  AAA_19           AAA domain
     0.0043   16.5   0.1       0.72    9.2   0.0    2.4  2  TniB             Bacterial TniB protein
     0.0051   16.3   0.0     0.0097   15.4   0.0    1.4  1  AAA_7            P-loop containing dynein motor region
     0.0085   16.4   0.4       0.13   12.6   0.4    2.3  1  zf-C2H2_2        C2H2 type zinc-finger (2 copies)
  ------ inclusion threshold ------
      0.012   15.4   0.0      0.022   14.5   0.0    1.4  1  Viral_helicase1  Viral (Superfamily 1) RNA helicase
      0.015   15.1   1.0       0.11   12.3   0.1    2.5  3  DEAD             DEAD/DEAH box helicase
      0.016   15.2   0.0        1.6    8.7   0.0    2.4  2  ResIII           Type III restriction enzyme, res subunit
       0.02   14.9   0.5       0.13   12.3   0.0    2.5  3  AAA_5            AAA domain (dynein-related subfamily)
      0.032   13.6   0.0       0.16   11.3   0.0    2.0  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
      0.037   13.9   0.0       0.11   12.4   0.0    1.8  1  AAA_3            ATPase family associated with various cellul
      0.068   12.9   0.0       0.15   11.8   0.0    1.6  1  IstB_IS21        IstB-like ATP binding protein
       0.09   12.4   0.1       0.31   10.6   0.1    1.9  1  RecR             RecR protein
       0.13   12.0   0.0         18    5.0   0.0    2.3  2  Sigma54_activat  Sigma-54 interaction domain


Domain annotation for each model (and alignments):
>> Rep_fac_C  Replication factor C C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       5.9   3.9e+03      36      53 ..      38      54 ..      33      61 .. 0.79
   2 !   69.2   0.1   4.6e-22     3e-19       1      88 []     242     328 ..     242     328 .. 0.98

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 5.9
                HHHHHHHHHHHGCCS..S CS
   Rep_fac_C 36 aediltqlhrvvkeqeel 53
                 +di+++l r++ ++ ++
  EPX73825.1 38 HKDIISTLDRFISTN-KV 54
                689****99999885.35 PP

  == domain 2  score: 69.2 bits;  conditional E-value: 4.6e-22
                 --HHHHHHHHHHHHHT-HHHHHHHHHHHHHHC---HHHHHHHHHHHGCCS..S-HHHHHHHHHHHHHHHHHHHCTH-HHHHHHHHHHH CS
   Rep_fac_C   1 phpteieeileaclngdfeeaykklrellvekGysaediltqlhrvvkeqeelpeaqkleilellgeiekrlveGasehlqlsallar 88 
                 php++i+  +++++n++f +ay+ + + + +kG++++di t +++ + e  +lp+++++ il++l+ ie+r++ G+se++qlsa++a+
  EPX73825.1 242 PHPSDIDYFIKSVMNEEFVTAYNAILSIKQQKGLALQDITTCIFEALDEL-QLPANTRIFILDQLAAIEHRMSFGCSEKIQLSAMIAS 328
                 8***********************************************96.6**********************************96 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.6   0.0   1.8e-20   1.2e-17       1     129 [.      57     174 ..      57     177 .. 0.84

  Alignments for each domain:
  == domain 1  score: 64.6 bits;  conditional E-value: 1.8e-20
                 EEEESSTTSSHHHHHHHHHHHHT.....HEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTS.TSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHH CS
         AAA   1 vllyGppGtGKTllakavakelg.....vefleisgsellskyvgesekkirelfkeakeka.kpsilfiDEidalaksrsgseseeeervvnqLltel 93 
                 +l+yGppGtGKT+++ a a+++       +++e+++s+ +   + +  ++i+++ ++ +  + + + +++DE+da++ +            +n+L +++
  EPX73825.1  57 MLFYGPPGTGKTSTILACARKVYgpqfrNQVMELNASDDR--GIDAVREQIKNFASTRQIFSsSFKMIILDEADAMTLAA-----------QNALRRVI 142
                 89*******************8433333779999999999..777777777777665433333369**********9999...........******** PP

                 HHTTTSSSTEEEEEEESSGGGSTHHHHSTTSSEEEE CS
         AAA  94 dgvkkkeskvivigatnrpdkldpallrgRfdrkie 129
                 ++++k   +v +++++n+++k+ pa+  +R++r  +
  EPX73825.1 143 EKYTK---NVRFCIICNYINKIAPAIQ-SRCTRFRF 174
                 *****...6******************.99988765 PP

>> DNA_pol3_delta2  DNA polymerase III, delta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.0   0.00073      0.48       2      45 ..      38      80 ..      37      93 .. 0.88
   2 !   49.9   0.2   4.5e-16     3e-13      84     162 ..      97     177 ..      86     178 .. 0.87
   3 ?   -1.3   0.0       2.4   1.6e+03      81     114 ..     273     307 ..     243     312 .. 0.69

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00073
  DNA_pol3_delta2  2 qeealkilskalksgrlahayLfeGdegigkkelalnlakallc 45
                     ++++++ l++ ++++++ h +Lf+G+ g+gk ++ l+ a+++  
       EPX73825.1 38 HKDIISTLDRFISTNKVPH-MLFYGPPGTGKTSTILACARKVYG 80
                     5778999***********9.79***************9998865 PP

  == domain 2  score: 49.9 bits;  conditional E-value: 4.5e-16
  DNA_pol3_delta2  84 kldqirelieels..rkpreskkkiiiiedaekmtksAaNalLktlEEPsenaifiLitsdtnklLktirSRcqelkfspl 162
                       +d +re i+++   r+ + s+ k+ii+++a+ mt +A+Nal +++E   +n+ f +i +  nk+ + i+SRc  ++f+pl
       EPX73825.1  97 GIDAVREQIKNFAstRQIFSSSFKMIILDEADAMTLAAQNALRRVIEKYTKNVRFCIICNYINKIAPAIQSRCTRFRFQPL 177
                      6899*96666665113445599*********************************************************97 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 2.4
  DNA_pol3_delta2  81 rsikldqir.elieelsrkpreskkkiiiiedaek 114
                      + + l++i+  + e l +    ++ +i+i+++   
       EPX73825.1 273 KGLALQDITtCIFEALDELQLPANTRIFILDQLAA 307
                      35666777634555666666778999999988655 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.6   0.0   3.2e-12   2.1e-09       2     119 ..      16     129 ..      15     162 .. 0.74

  Alignments for each domain:
  == domain 1  score: 37.6 bits;  conditional E-value: 3.2e-12
       Rad17   2 kedenelWfekykPekaeelavhkkkieevkewlkadvLesrkkriLLisGPsGCgkstvv.kvLskelgiklrewlnpvslkepdnqksdfkglteke 99 
                 +++ + +W+eky+P  +e++  hk  i+ +++++ ++ +++      L  GP+G gk+ ++     k +g+++r+ +  ++  + d   + ++ +++ +
  EPX73825.1  16 QDESTLPWVEKYRPSGLEDVVAHKDIISTLDRFISTNKVPHM-----LFYGPPGTGKTSTIlACARKVYGPQFRNQVMELN-ASDDRGIDAVREQIKNF 108
                 5667789******************************99988.....99********866515666999*****9987766.33444444445444444 PP

       Rad17 100 srf.lsqiesfkeleLkdaky 119
                  +  +    sfk + L +a  
  EPX73825.1 109 ASTrQIFSSSFKMIILDEADA 129
                 433233334555555555544 PP

>> AAA_assoc_2  AAA C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.0   2.6e-08   1.7e-05       3      55 ..     193     239 ..     191     280 .. 0.85

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 2.6e-08
                  X.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXX CS
  AAA_assoc_2   3 kklkleddalealaeladGDaRkaLnlLElaaeaaeakegkieitledleeal 55 
                  ++++++++a +a+++l+ GD+RkaLn+L+++ +a e      +i+++ + +++
   EPX73825.1 193 EHCNIDSEAKDAVLKLSRGDMRKALNILQACHAAYE------HIDESSVYNCV 239
                  6789*************************9998876......45555555555 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0     1e-07   6.9e-05      37     112 ..      38     115 ..      13     162 .. 0.77

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 1e-07
      DUF815  37 kealventeqfleglpannvLLwGarGtGKSslvkallneyaeegLr..lievekedlkelpklvellrerperfilf 112
                 ++++++   +f++ ++  ++L++G  GtGK s++ a+ +++   + r  ++e++ +d + ++++ e++++ +    +f
  EPX73825.1  38 HKDIISTLDRFISTNKVPHMLFYGPPGTGKTSTILACARKVYGPQFRnqVMELNASDDRGIDAVREQIKNFASTRQIF 115
                 456788999*******************************99999544499****99999999999999877665555 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   2.8e-06    0.0019      21     121 ..      57     151 ..      44     152 .. 0.81
   2 ?    1.3   0.0      0.35   2.3e+02     159     183 ..     198     222 ..     184     229 .. 0.86

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 2.8e-06
      AAA_30  21 avltGpAGtGKtta.lkalreaweaa.ggrvi.glAptgkaAkvLaeelgieastiakllkrlkgrarlepg.tllivDEagmvdtkqlaallkaaeka 115
                 ++  Gp+GtGKt + l+ +r+++  +   +v+ + A+  +  ++++e++   ast + +     +      + +++i DEa  +  +  +al + +ek+
  EPX73825.1  57 MLFYGPPGTGKTSTiLACARKVYGPQfRNQVMeLNASDDRGIDAVREQIKNFASTRQIFS----S------SfKMIILDEADAMTLAAQNALRRVIEKY 145
                 6778*******965155669999999877877477999999999***9998888888777....2......3389*********999999999999998 PP

      AAA_30 116 gakvil 121
                    v++
  EPX73825.1 146 TKNVRF 151
                 888776 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.35
      AAA_30 159 eseeraaalalregdaeealealad 183
                 +se ++a+l+l++gd+++al+ l++
  EPX73825.1 198 DSEAKDAVLKLSRGDMRKALNILQA 222
                 57889************99988775 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0   2.4e-06    0.0016      18      42 ..      53      79 ..      40     113 .. 0.74
   2 ?    0.9   0.1      0.49   3.3e+02     209     226 ..     112     127 ..     100     145 .. 0.74

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 2.4e-06
      AAA_11 18 e..itliqGPPGtgKTktivellsqll 42
                +    l+ GPPGtgKT+ti++  ++++
  EPX73825.1 53 KvpHMLFYGPPGTGKTSTILACARKVY 79
                3334799**************999885 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.49
      AAA_11 209 klleklakkfdvviIDEA 226
                 +++ +    f+++i DEA
  EPX73825.1 112 RQIFSS--SFKMIILDEA 127
                 333444..7********9 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   8.4e-07   0.00056      15     104 ..      44     141 ..      37     306 .. 0.70

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 8.4e-07
      AAA_16  15 alervrsgrp.elvllsGesGvGKsslvrellralekd...............ggiflrgkcdqlesaipysalaqalareellrqlldeaesaeleaw 97 
                 +l+r  s    + +l++G++G+GK+s + +++r + +                g+ ++r++ + +       a +++++ +++   +lde ++a   a+
  EPX73825.1  44 TLDRFISTNKvPHMLFYGPPGTGKTSTILACARKVYGPqfrnqvmelnasddrGIDAVREQIKNF-------ASTRQIFSSSFKMIILDE-ADAMTLAA 134
                 455444444459****************8888766655453322222222221111122222222.......322233232333333333.22233334 PP

      AAA_16  98 rekleea 104
                 + +l+++
  EPX73825.1 135 QNALRRV 141
                 4434443 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.1   0.00087      0.58       7      57 ..      56     102 ..      52     109 .. 0.68
   2 !    8.9   0.0    0.0025       1.7      79     123 ..     102     149 ..      82     161 .. 0.70
   3 ?   -1.4   0.0         4   2.6e+03      58     103 ..     264     308 ..     226     325 .. 0.65

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00087
      AAA_22   7 ilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdll 57 
                 +++ +G++GtGKT ++   +++     +  + r +v++ +++ + + + ++
  EPX73825.1  56 HMLFYGPPGTGKTSTILACARKV----YGPQFRNQVMELNASDDRGIDAVR 102
                 6889**********998888775....222245555555555555555555 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0025
      AAA_22  79 lealeqalrarav....ielliiDEaqhlrseealeeLrsllnlsrkgv 123
                 +e++ + +++r+      +++i+DEa+ + + +a + Lr+  +  +k+v
  EPX73825.1 102 REQIKNFASTRQIfsssFKMIILDEADAM-TLAAQNALRRVIEKYTKNV 149
                 4555555555555666678**********.8888888876655444444 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 4
      AAA_22  58 rellralglelkaerlsseellealeqalraravielliiDEaqhl 103
                 +++l++ ++++ a  ++   ++    + l+  a ++++i+D    +
  EPX73825.1 264 NAILSIKQQKGLA-LQDITTCIFEALDELQLPANTRIFILDQLAAI 308
                 4444444444444.44444444333333333333677777766555 PP

>> DNA_pol3_delta  DNA polymerase III, delta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.2   2.1e-06    0.0014      47     170 ..     107     221 ..      82     223 .. 0.84
   2 ?   -0.8   0.0       1.7   1.1e+03      42      73 ..     280     313 ..     274     331 .. 0.72

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 2.1e-06
                     TTSTTTTSSSSE.EEEEEE--.....TT-S-TTHHHHHHHHTTT--SSEEEEEEES.S--HHHHHHHHHTTTEEEEEE----TTTHHHHHHHHHH CS
  DNA_pol3_delta  47 eecetlpffsdk.rivvlknpklltkesklnekllkeLeeylsnlpedtlLiliapkklderkklvklLkkkatvveaktlkeeelkkwiqkraq 140
                     + + t   fs++ ++++l+ +      +  +   +++L ++++++ +++ +++i++      +k+   ++++ t +++++l + e+ k+++ ++ 
      EPX73825.1 107 NFASTRQIFSSSfKMIILDEA------DAMTLAAQNALRRVIEKYTKNVRFCIICN----YINKIAPAIQSRCTRFRFQPLPSLEVEKYVDHVID 191
                     555555555433377777777......668999999********************....445899999************************** PP

                     HTT-EE-HHHHHHHHHHHTT-HHHHHHHHH CS
  DNA_pol3_delta 141 elglkiekealelLlelvennlsaikqele 170
                     ++  +i+ ea +  l+l+ ++++ + + l+
      EPX73825.1 192 NEHCNIDSEAKDAVLKLSRGDMRKALNILQ 221
                     **********************99998886 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 1.7
                     HH..HTTTSTTTTSSSSEEEEEEE--......TT CS
  DNA_pol3_delta  42 idd.vleecetlpffsdkrivvlknpkllt.kes 73 
                     i+  ++e++  l + ++ ri +l++++ ++ + s
      EPX73825.1 280 ITTcIFEALDELQLPANTRIFILDQLAAIEhRMS 313
                     45558999999999999*******9999986333 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0   2.3e-06    0.0015       6      97 ..      58     153 ..      54     181 .. 0.77
   2 ?   -1.8   0.1       4.4   2.9e+03      52      71 ..     284     303 ..     248     314 .. 0.45

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 2.3e-06
      AAA_14   6 vitGaRrvGKTtllkqlikell..vkkesilyinldderdkkladpekllelilek.lkeekktylflDEiqevp.ewekalkslvdeg.knldviv 97 
                 +  G+  +GKT  +  ++++ +    +++++++n  d+r  ++  + ++ ++   + + ++  ++++lDE+  ++  +++al+++++++ kn+++++
  EPX73825.1  58 LFYGPPGTGKTSTILACARKVYgpQFRNQVMELNASDDRGIDAVRE-QIKNFASTRqIFSSSFKMIILDEADAMTlAAQNALRRVIEKYtKNVRFCI 153
                 5679999***************987789999999999888554433.344443333333347789******9886267899****998888998876 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 4.4
      AAA_14  52 llelileklkeekktylflD 71 
                 + e++ e+  + ++++++lD
  EPX73825.1 284 IFEALDELQLPANTRIFILD 303
                 22222222222455556666 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0   2.2e-06    0.0015       2      54 ..      28      75 ..      27      90 .. 0.85

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 2.2e-06
      RuvB_N  2 rPksleeyigqekvkeklkifieaakkreealdhvllyGpPGlGkttlakiia 54
                rP+ le+ ++ +++ ++l+ fi++      ++ h+l+yGpPG Gkt+     a
  EPX73825.1 28 RPSGLEDVVAHKDIISTLDRFISTN-----KVPHMLFYGPPGTGKTSTILACA 75
                9999***************999875.....578*************8655555 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   3.7e-06    0.0025       5      90 ..      57     143 ..      53     151 .. 0.74

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 3.7e-06
      AAA_24   5 iliyGpsgiGKTtlakelgpkplfidtekGlksldadkfpdieswedfldevvel....aaeladyktlviDtideleelclaevirqne 90 
                 +l yGp+g+GKT++++    + ++   ++  +++   +  d +++++++++++ +    +   + +k +++D +d +   + + ++r  e
  EPX73825.1  57 MLFYGPPGTGKTSTILAC-ARKVYGPQFR--NQVMELNASDDRGIDAVREQIKNFastrQIFSSSFKMIILDEADAMTLAAQNALRRVIE 143
                 789***************.7777776666..4444444444457777788887777667778899**********997766666666555 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.2     2e-05     0.013       9      73 ..      53     133 ..      47     236 .. 0.69

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 2e-05
      AAA_19   9 kekvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAakelrerlaalgae.................atTiH 73 
                 k +++l  ++pGtGKT ++ +  + +   + ++ + + l a   r  + +re+++++                    a+T+ 
  EPX73825.1  53 KVPHMLFYGPPGTGKTSTILACARKVYGPQFRN-QVMELNASDDRGIDAVREQIKNFASTrqifsssfkmiildeadAMTLA 133
                 5578999************99988888777664.666677888899999999885544444444444444444444444443 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.0    0.0011      0.72      26      58 ..      45      77 ..      33     117 .. 0.81
   2 ?    5.1   0.1      0.02        13     115     164 ..     114     160 ..      99     181 .. 0.68

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.0011
        TniB 26 LleypkrkrmpnlllvGdsnnGKtmivekFarl 58
                L ++ + +++p++l++G++ +GKt+ +  +ar+
  EPX73825.1 45 LDRFISTNKVPHMLFYGPPGTGKTSTILACARK 77
                4445567889**************999888765 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.02
        TniB 115 lrelkvrvLiiDEihnllagsarkqreflnalksLgnelkipivlvGtee 164
                 + + + +++i+DE + +      +q+++  ++ + + +++  i++  +++
  EPX73825.1 114 IFSSSFKMIILDEADAMT---LAAQNALRRVIEKYTKNVRFCIICNYINK 160
                 556789*********998...55566666666666666666666655555 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   1.5e-05    0.0097      34      72 ..      55      93 ..      39     112 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.5e-05
       AAA_7 34 kpvllvGptGtGKtviikdllkkldkekylsltinfsaq 72
                 ++l++Gp GtGKt++i  + +k+   ++   +++++a+
  EPX73825.1 55 PHMLFYGPPGTGKTSTILACARKVYGPQFRNQVMELNAS 93
                4899***************99999988888888888775 PP

>> zf-C2H2_2  C2H2 type zinc-finger (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   0.4   0.00019      0.13      10      85 ..     106     204 ..     101     210 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00019
   zf-C2H2_2  10 keveellehmskkhgffip...ereylvdleglleylrekieekleClyCekefk....................slealreHmkkkgHckineeeeee 85 
                 k++ ++ +  s+++++ i    ++ +l+ ++ l +++++  ++   C++C++ +k                    ++e++ +H+ +++Hc+i+ e ++ 
  EPX73825.1 106 KNFASTRQIFSSSFKMIILdeaDAMTLAAQNALRRVIEKYTKNVRFCIICNYINKiapaiqsrctrfrfqplpslEVEKYVDHVIDNEHCNIDSEAKDA 204
                 5566677777888888887533444555888888888888888999*****99999999999999999999999999***************8876554 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   3.3e-05     0.022       5      83 ..      61     133 ..      57     142 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 3.3e-05
  Viral_helicase1   5 GvpGcGKStlirkllrts..liltvnrptaelltegkpklpnlsvrtvdsflmalvkstkgkililDEylllhaGyillla 83 
                      G pG GK++ i   +r+    +++  ++  ++  ++  ++ +++++++ s  + ++ s  +k +ilDE+ +++      la
       EPX73825.1  61 GPPGTGKTSTILACARKVygPQFRNQVMELNASDDRGIDAVREQIKNFASTRQIFSSS--FKMIILDEADAMT------LA 133
                      77***************8887777788888888888899999*9**999999988876..********97766......34 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0       1.1   7.2e+02      16      33 ..      56      73 ..      44      84 .. 0.79
   2 ?   12.3   0.1   0.00016      0.11     106     149 ..     103     145 ..      69     155 .. 0.72
   3 ?   -1.0   0.0         2   1.3e+03     101     136 ..     259     294 ..     216     329 .. 0.63

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 1.1
                EEEEEESTTSSHHHHHHH CS
                xxxxxxxxxxxxxxxxxx RF
        DEAD 16 dvlvaaeTGsGKTlafli 33
                ++l  ++ G+GKT   l 
  EPX73825.1 56 HMLFYGPPGTGKTSTILA 73
                57788999*****88654 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 0.00016
                 HHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 106 grlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnql 149
                 +++ ++ st+++  s++++++lDEad +     ++ ++r++++ 
  EPX73825.1 103 EQIKNFASTRQIFSSSFKMIILDEADAMTLA-AQNALRRVIEKY 145
                 44455557999999**************987.888888887776 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 2
                 EEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 101 vvgtpgrlddllstgklnlsqvrflVlDEadrlldq 136
                 +v+    ++++ +++ l l+++++ ++   d+l+  
  EPX73825.1 259 FVTAYNAILSIKQQKGLALQDITTCIFEALDELQLP 294
                 566666677777778888888888888877777654 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.0    0.0024       1.6      18      50 ..      44      80 ..      25      93 .. 0.76
   2 ?    4.0   0.0     0.068        45     124     162 ..     110     150 ..      86     154 .. 0.75

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0024
                .........TTSEEEEEESTTSTHHHHHHHHHHHH-S CS
      ResIII 18 klks....krdkrglikmaTGtGKTlvaaklierllk 50
                +l+     ++  ++l+  + GtGKT ++++ +++++ 
  EPX73825.1 44 TLDRfistNKVPHMLFYGPPGTGKTSTILACARKVYG 80
                3333443466779***************999988765 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.068
                 ...HHHTTT-SEEEEETGGGTTS...TTTHHHHHT---SEE CS
      ResIII 124 eseellrdrfdviiiDEaHrlgak..kswreilekfkeavl 162
                  + +  +++f++ii DEa  ++ +  ++ r+++ek+ ++v+
  EPX73825.1 110 STRQIFSSSFKMIILDEADAMTLAaqNALRRVIEKYTKNVR 150
                 56677889999******987654432699998888777665 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       7.9   5.2e+03      71      93 ..      32      53 ..      32      55 .. 0.82
   2 ?   12.3   0.0   0.00019      0.13       1      90 [.      56     143 ..      56     149 .. 0.62
   3 ?   -2.9   0.0       9.5   6.3e+03      68      96 ..     274     302 ..     253     310 .. 0.66

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 7.9
                EESGGG--HHHHHHHHHHHHSSE CS
       AAA_5 71 lDEveraesevlnsLlslleerr 93
                l++v  a+++++++L + +++++
  EPX73825.1 32 LEDVV-AHKDIISTLDRFISTNK 53
                57777.99******999998876 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 0.00019
                 EEEEE--SSSSHHHHHHHGGGGB.....S--EEEEE--TT--HHHHH--B--.........--------G-SEEEEESGGG--HHHHHHHHHHHH CS
       AAA_5   1 dvlLvGppGtgKselaerlaaal.....nreveyvqltrdtteedlkgrreikngttslvdsplvraaregeilvlDEveraesevlnsLlslle 90 
                 ++l  GppGtgK++ +   a+ +     +++v + + ++d   + ++ +++    + + + +++     + ++++lDE + +  +++n+L +++e
  EPX73825.1  56 HMLFYGPPGTGKTSTILACARKVygpqfRNQVMELNASDDRGIDAVREQIK----NFASTRQIFS---SSFKMIILDEADAMTLAAQNALRRVIE 143
                 6899************99999998884444444444444555555555554....2222222222...233467777777777777777766665 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 9.5
                 EEEEESGGG--HHHHHHHHHHHHSSEEE. CS
       AAA_5  68 ilvlDEveraesevlnsLlslleerrlll 96 
                  l l +++++  e+l++L+ + ++r + l
  EPX73825.1 274 GLALQDITTCIFEALDELQLPANTRIFIL 302
                 45566777777777777777777776665 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00024      0.16      24      59 ..      56      92 ..      32     122 .. 0.76
   2 ?   -0.1   0.0      0.77   5.1e+02     109     133 ..     121     145 ..     106     152 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00024
  Mg_chelatase 24 nlllvGppGsGKt.mlakrlpsllpplseeealevak 59
                  ++l++GppG+GKt  + ++  ++  p  +++++e ++
    EPX73825.1 56 HMLFYGPPGTGKTsTILACARKVYGPQFRNQVMELNA 92
                  89**********7345566777777777777777655 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.77
  Mg_chelatase 109 vLfLDElpefkrkvlevLRePledg 133
                   +++LDE+  ++  + ++LR+ +e+ 
    EPX73825.1 121 MIILDEADAMTLAAQNALRRVIEKY 145
                   789****************999975 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   0.00016      0.11       1      87 [.      56     143 ..      56     152 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00016
       AAA_3   1 hvllegvPGlaktllvkalakaldlefkriqftpdllPsdilGtevfeekekefefkkGpvfa...nllladeinrappktqsalleame 87 
                 h+l+ g PG++kt ++ a a+++     r q+  +l  sd  G++ ++e+ k+f  ++  +f+   ++++ de +  +  +q al  ++e
  EPX73825.1  56 HMLFYGPPGTGKTSTILACARKVYGPQFRNQV-MELNASDDRGIDAVREQIKNFASTRQ-IFSssfKMIILDEADAMTLAAQNALRRVIE 143
                 99********************9999999997.5899****************987764.554233588899999999999999877766 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00023      0.15      46     136 ..      53     144 ..      34     157 .. 0.62

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00023
   IstB_IS21  46 kkenivllGpsGvGKsh..laialgveavraglsvlfvrvedLveelkrarrdgklaralkrllkv.dllilDdlgllpldqaeaellfeviek 136
                 k   +++ Gp+G+GK+   la+a  v + +   +v+ + ++d     ++ ++  ++a++ + +  + +++ilD+    +l   +++ l +viek
  EPX73825.1  53 KVPHMLFYGPPGTGKTStiLACARKVYGPQFRNQVMELNASDDRGIDAVREQIKNFASTRQIFSSSfKMIILDEADAMTLA--AQNALRRVIEK 144
                 3446899********862266665555555555555555555433334444455555555555443499999999888775..45566777765 PP

>> RecR  RecR protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.1   0.00047      0.31       4      26 ..     137     159 ..     135     163 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00047
                 HHHHHHHHHHHH-EE-TTT--EE CS
        RecR   4 eLaeaLqeakekvrhCsrCgnlt 26 
                 +L + +++  ++vr+C +C+ + 
  EPX73825.1 137 ALRRVIEKYTKNVRFCIICNYIN 159
                 5778899999*********9885 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.036        24       9      38 ..      39      70 ..      33      95 .. 0.72
   2 ?    5.0   0.0     0.028        18      96     120 ..     121     145 ..     113     150 .. 0.89

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.036
                     HHHHHHHHHHCTSS..S-EEEECSTTSSHHHH CS
  Sigma54_activat  9 kelleqikkvaktd..lsvlitGesGtGKell 38
                     k+++++++++++t+   ++l  G  GtGK+  
       EPX73825.1 39 KDIISTLDRFISTNkvPHMLFYGPPGTGKTST 70
                     6778888888887766799**********864 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.028
                      EEEEETGGGS-HHHHHHHHHHHHHS CS
  Sigma54_activat  96 tlfLDeigelplelQekLlrvlqeg 120
                      ++ LDe   ++l++Q+ L rv+++ 
       EPX73825.1 121 MIILDEADAMTLAAQNALRRVIEKY 145
                      789*******************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (339 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       925  (0.0515924); expected 358.6 (0.02)
Passed bias filter:                      735  (0.040995); expected 358.6 (0.02)
Passed Vit filter:                       104  (0.00580066); expected 17.9 (0.001)
Passed Fwd filter:                        27  (0.00150594); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              27  [number of targets reported over threshold]
# CPU time: 0.62u 0.33s 00:00:00.95 Elapsed: 00:00:00.48
# Mc/sec: 2111.87
//
Query:       EPX73826.1  [L=390]
Description: galactose residue biosynthesis protein Pvg2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.024   15.2   0.0      0.088   13.4   0.0    1.9  2  Gly_transf_sug  Glycosyltransferase sugar-binding region cont
       0.22   10.2   0.2         16    4.1   0.3    2.1  2  MRVI1           MRVI1 protein


Domain annotation for each model (and alignments):
>> Gly_transf_sug  Glycosyltransferase sugar-binding region containing DXD motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   9.9e-06     0.088      13      77 ..     150     205 ..     143     225 .. 0.78
   2 ?   -2.4   0.0      0.84   7.6e+03       9      39 ..     279     309 ..     273     335 .. 0.59

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 9.9e-06
  Gly_transf_sug  13 kahpdyqvvvlskelekvrvaildlefllsdtpwfeeakkllplfialsDllRlaiLykyGGiYl 77 
                       hpd+++v++s+e   +r+   +++++l+  +w      ++ + +a++  + l+ Ly+yGG+ +
      EPX73826.1 150 YRHPDWEYVKWSEEHL-ERLIQSNFPSFLK--SW------RMLNRPARAQWATLMGLYEYGGLWI 205
                     57***********976.5666666666666..44......5678899***************976 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.84
  Gly_transf_sug   9 eslakahpdyqvvvlskelekvrvaildlef 39 
                     esl++ hp   v  +s+ +  ++ ++ d  +
      EPX73826.1 279 ESLLNRHPFQGVSEFSNFMALNATKMYDKTY 309
                     6777777777777777766533333333333 PP

>> MRVI1  MRVI1 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.3    0.0017        16     472     497 ..      13      36 ..      10      45 .. 0.88
   2 ?    3.9   0.0    0.0019        17     321     348 ..     206     234 ..     183     237 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.0017
       MRVI1 472 nkvlWlvvaaivlfavllslltsrlf 497
                 +k l  ++ +iv+fav++++++s  +
  EPX73826.1  13 WKLLKASIPFIVIFAVIFGFFKS--Y 36 
                 888889999************99..4 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.0019
       MRVI1 321 eRsfnpledeD.dvqrkkRsaslnsknss 348
                 +Rsf +l++ D  +q+++Rsa lns+n s
  EPX73826.1 206 SRSFQALKNFDhAIQVAERSALLNSRNYS 234
                 8******9977258************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (390 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       501  (0.0279436); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2761.66
//
Query:       EPX73827.1  [L=555]
Description: methionine-tRNA ligase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.4e-89  299.8   0.7      3e-88  296.2   0.7    2.1  1  tRNA-synt_1g  tRNA synthetases class I (M)
    2.7e-18   65.6   0.1      1e-10   40.6   0.0    3.2  3  tRNA-synt_1   tRNA synthetases class I (I, L, M and V)
    6.9e-09   35.5   0.1    6.6e-05   22.4   0.0    2.2  2  tRNA-synt_1e  tRNA synthetases class I (C) catalytic domain
  ------ inclusion threshold ------
       0.02   13.8   0.0      0.037   13.0   0.0    1.4  1  tRNA-synt_1f  tRNA synthetases class I (K)
      0.035   13.2   1.3      0.061   12.4   1.3    1.3  1  Omptin        Omptin family


Domain annotation for each model (and alignments):
>> tRNA-synt_1g  tRNA synthetases class I (M)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  296.2   0.7   8.3e-92     3e-88       2     390 ..      22     389 ..      21     390 .. 0.91

  Alignments for each domain:
  == domain 1  score: 296.2 bits;  conditional E-value: 8.3e-92
                   EEEE--B--SS---HHHHHHHHHHHHHHHHHHHTT-E..EEEEEEE---SHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHHTT---SEEEETTSHHH CS
  tRNA-synt_1g   2 lvttalpYangklHlGhllevisaDifaRykrlrgee..vlfvcgtDehGtpielkAekegvtpeelvekvheeikelfkklnisfdkygrttseeh 96 
                   l tt+++Y+n+++HlGhl++ +  D +aR+++   ++  v+  +gtDehG ++++ A++++  p +l++++++++++l    n ++++++rtt+++h
    EPX73827.1  22 LTTTPIFYVNAAPHLGHLYSLVLCDSIARFQKIFRTDrpVFSSTGTDEHGLKVQTVAQEQNKRPLDLCTENSQRFQNLAVLANTAYSHFIRTTNKQH 118
                   78******************************997776688899***************************************************** PP

                   HHHHHHHHHHHHHTT-EEEEEEEEEEETTTTEEE-GGG-EE........-TTS-EE-TTSSB-E................EEE.EEEEEE-GGGGHH CS
  tRNA-synt_1g  97 kelvqeifkklkekgliyekeieqlycpkderflpdryvegtCPkckseeargdqceecgkkleptelinpksaisgskpevketehlffklskfek 193
                     +vq ++++lkek++i+ ++ e++y+++de+f+p++ ++      +         e+ g++         +s+ +g+k +++++ ++ fkls++++
    EPX73827.1 119 VAAVQGFWNQLKEKKYIEFQHHEGWYSTSDETFYPESALQRIV---N---------EKTGEEE-------LVSTETGKKVQWSSEMNYHFKLSSLRS 196
                   **************************************86633...2.........2222221.......13555677777888************* PP

                   HHHHHH.HH-TT..SHHHHHHHH.HHHHT----EE-E...SS-SSS-EETTECCEEE-HHHHHHHHHHHTTTTT-...TTSGGGG.G-.-S...... CS
  tRNA-synt_1g 194 klkewieeeeke..leenvkkivkewlkegLkdlais...rdldwGipvPgaekkvlYVWldAligYisatkelakkkgeeekwkeyW.akdkevel 284
                   +l e + e++++  +++  +++v++ lk+gL+dl+is   ++l+wGipvP+++ +++YVWldAl++Y+++ ++  ++   ++  +  W a       
    EPX73827.1 197 RLIELY-EQNPNfvQPSIYHNQVLSELKSGLQDLSISrprSRLSWGIPVPNDDFQTIYVWLDALVNYLTVAGYPWNS---SDPASGGWpA------D 283
                   ******.555566899999******************77669*******************************9933...3444555624......4 PP

                   EEEEEGGGHHHHHTHHHHHHHHTT----S-EEEE--EEE--------------HHHHHHHH-HHHHHHHHHHHS-TTS-EEE-HHHHHHHHHHHCCC CS
  tRNA-synt_1g 285 vhfigkdiikFHtifwPaillgaelklpkkvvaheyltvegkKlSkSrgvvvkakealerldadllRYylaaeapekkDldfswedfvervNseLad 381
                   vh+igkdi++FH+i+wPa+l++a+l lpk++ +h+++t++  K+SkS g+v+++ e+++ +  ++++Yyl++++  ++D++f+ e + + + ++L  
    EPX73827.1 284 VHIIGKDIVRFHCIYWPAFLMAAGLPLPKQILVHSHWTMNKVKMSKSLGNVIDPFELIKDYGEEIVKYYLLKQGRLTSDSNFEIEGLEKDYEHDLRR 380
                   9************************************************************************************************ PP

                   HHHHHHHHH CS
  tRNA-synt_1g 382 klgnlvnRv 390
                   +lg l +R+
    EPX73827.1 381 NLGVLTSRI 389
                   ****99996 PP

>> tRNA-synt_1  tRNA synthetases class I (I, L, M and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   8.4e-08    0.0003      21      83 ..      16      81 ..       4     132 .. 0.78
   2 ?    2.3   0.0     0.011        39     367     432 ..     174     245 ..     160     251 .. 0.80
   3 !   40.6   0.0   2.8e-14     1e-10     487     601 ..     252     365 ..     246     366 .. 0.86

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 8.4e-08
  tRNA-synt_1 21 e.kkefilvdgPPyvtGslHiGhalaktlkdivirykrmkGke..vlyvpGwDhaGlaieakvekk 83
                 +  k+f  + +  yv+ ++H+Gh +  +l d + r++++   +  v   +G+D +Gl ++++ +++
   EPX73827.1 16 SlSKPFLTTTPIFYVNAAPHLGHLYSLVLCDSIARFQKIFRTDrpVFSSTGTDEHGLKVQTVAQEQ 81
                 4478899999999***********************99855441166689**********987665 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.011
  tRNA-synt_1 367 rskkpiiyrateqWfvrvkeladaalkave.kvqfv.pkskekryaswle.niqdWciSRqr...wWGhrip 432
                   ++k +   +   ++ ++++l+  +++  e + +fv p  ++++  s l+   qd  iSR r    WG ++p
   EPX73827.1 174 ETGKKVQWSSEMNYHFKLSSLRSRLIELYEqNPNFVqPSIYHNQVLSELKsGLQDLSISRPRsrlSWGIPVP 245
                  57778888888889999999*******99977888735558888777776269******9652237***998 PP

  == domain 3  score: 40.6 bits;  conditional E-value: 2.8e-14
  tRNA-synt_1 487 lDvWFsSgswpfstlgypeedteelkkffpadmlleGlDiirgWvarlillslaltgsePfkevlvhglvrdeeGrKmSKslgNvidpldvikkygad 584
                  + vW +      ++ gyp + ++  +  +pad+ + G Di+r+       + +a     P k++lvh+  + ++  KmSKslgNvidp ++ik yg +
   EPX73827.1 252 IYVWLDALVNYLTVAGYPWNSSDPASGGWPADVHIIGKDIVRFHCIYWPAFLMAAGLPLP-KQILVHSHWTMNK-VKMSKSLGNVIDPFELIKDYGEE 347
                  568999999999********99999*****************987766666555555555.99*****887766.79********************* PP

  tRNA-synt_1 585 alRltli.lsdvgrdinl 601
                  +++++l+ +   ++d n+
   EPX73827.1 348 IVKYYLLkQGRLTSDSNF 365
                  ******977788888776 PP

>> tRNA-synt_1e  tRNA synthetases class I (C) catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.0   6.4e-05      0.23      19     163 ..      30     178 ..      26     187 .. 0.77
   2 !   22.4   0.0   1.8e-08   6.6e-05     209     283 ..     283     356 ..     279     374 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 6.4e-05
                   TTS--BHHHHHHHHHHHHHHHHHHHTT-EE.EEEEEBB--SH.HHHHHHHHTTS-HHHHHHHHHHHHHHHHHHTT----S.B--BGGGGHHHHHHHH CS
  tRNA-synt_1e  19 vydashlGhaRslvafDilrrilqalgYdv.qfvqnvtDidD.kiikrareeeksvkelaekfieefkkdleaLnvlkpt.leprvsekvdeiielv 112
                   v  a hlGh  slv +D ++r+ + +  d   f +  tD    k+ + a+e++k   +l+ +  + f++     n   ++ +++   ++v+++ ++ 
    EPX73827.1  30 VNAAPHLGHLYSLVLCDSIARFQKIFRTDRpVFSSTGTDEHGlKVQTVAQEQNKRPLDLCTENSQRFQNLAVLANTAYSHfIRTTNKQHVAAVQGFW 126
                   56689*****************9997766415666677765448888999999999999999999998765555554433156677789******** PP

                   HHHHHTTSEEE-TTS-EEE-GGG-TTTTTTTT--HHHHHHT----S-..-S-S CS
  tRNA-synt_1e 113 ekliekgyaYavsdgdvyfdvskkeeYgklskqnleelelgaegevs..eekk 163
                   ++l ek y   ++  +  +++s++  Y + + q++ + ++g+e+ vs  ++kk
    EPX73827.1 127 NQLKEKKYIEFQH-HEGWYSTSDETFYPESALQRIVNEKTGEEELVSteTGKK 178
                   *******986665.788899999999999888888777777777666334444 PP

  == domain 2  score: 22.4 bits;  conditional E-value: 1.8e-08
                   EEEEEEGGGTTTHHHHHHHHHHHHSSS--EEEEEEE--EEETTBE--TTTT---BHHHHHTTS-HHHHHHHHHSS CS
  tRNA-synt_1e 209 dihsGGiDLafPhhenelaqseaafdkqlvkyflhnghlkiegekmsksLknfitikdvlkkfdprqlRllllsa 283
                   d+h  G+D++  h     a  +aa      ++ +h+ h ++++ kmsksL+n+i   +++k +  ++++++ll++
    EPX73827.1 283 DVHIIGKDIVRFHCIYWPAFLMAAGLPLPKQILVHS-HWTMNKVKMSKSLGNVIDPFELIKDYGEEIVKYYLLKQ 356
                   666666666666666666666665554445555665.6789*****************************99875 PP

>> tRNA-synt_1f  tRNA synthetases class I (K)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0     1e-05     0.037     278     334 ..     323     376 ..     306     403 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1e-05
  tRNA-synt_1f 278 ggekmssSkGnvltledwlevaepevlrflilrrkPkkakkldldleilrlvdeYdk 334
                   ++ kms+S Gnv+ + ++++ + +e++++++l+   + +++ d ++ei  l  +Y++
    EPX73827.1 323 NKVKMSKSLGNVIDPFELIKDYGEEIVKYYLLK---QGRLTSDSNFEIEGLEKDYEH 376
                   4459***************************99...444445555556666666654 PP

>> Omptin  Omptin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   1.3   1.7e-05     0.061     175     259 ..      94     178 ..      73     192 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.7e-05
                 EEETTEEEEEEEEEEEEEEEEEEEEECTCTEEEEEEEEEEEEEEEEEEEEEECCTTEEEEEEEEEEEEEEEE.EEEEEEETTTTEE CS
      Omptin 175 yrienlefnallkysdwvsakdtDeHylrsltfkdkvknsnylsasidagyyvtpnaklfveasynkysekk.gdteildkktgts 259
                  r++nl + a   ys++++ +++ +H +    f ++ k+++y++ + + g+y t+   ++ e++ +++ ++k g+ e + ++tg++
  EPX73827.1  94 QRFQNLAVLANTAYSHFIRTTNK-QHVAAVQGFWNQLKEKKYIEFQHHEGWYSTSDETFYPESALQRIVNEKtGEEELVSTETGKK 178
                 56777888888889999987755.78898999***********************************9887626666677777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (555 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       548  (0.030565); expected 358.6 (0.02)
Passed bias filter:                      347  (0.0193541); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.78u 0.36s 00:00:01.14 Elapsed: 00:00:00.62
# Mc/sec: 2680.56
//
Query:       EPX73828.1  [L=470]
Description: DNA polymerase delta small subunit Cdc1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.1e-43  147.2   0.2    5.7e-43  146.7   0.2    1.2  1  DNA_pol_E_B  DNA polymerase alpha/epsilon subunit B
    1.6e-36  125.3   0.0    2.6e-36  124.6   0.0    1.4  1  DNA_pol_D_N  DNA polymerase delta subunit OB-fold domain


Domain annotation for each model (and alignments):
>> DNA_pol_E_B  DNA polymerase alpha/epsilon subunit B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  146.7   0.2   6.3e-47   5.7e-43       2     211 .]     192     416 ..     191     416 .. 0.96

  Alignments for each domain:
  == domain 1  score: 146.7 bits;  conditional E-value: 6.3e-47
                  EEEES--S-TT---...-HHHHHHHHHHH.......HTT--SEEEEES-SSBTTSHHHHHT---............S--SSHHHHHHHHTHHHHTTS- CS
  DNA_pol_E_B   2 vivsglnldndnrs...leaLrkiLqgya......peesppdvlilaGnfvdaahkaiasskvs............tdekkenfdalalllsilesll 78 
                  +++sgl l+nd      l++  ++L+g+        + + +++++++Gn+++ a + ++ss+ s            +d++++n+++  +l++ l++l+
   EPX73828.1 192 AVASGLGLSNDGIEgigLHQVVDYLRGILpsispsFDPTCVKRFMILGNCLAPAIEISDSSTPSvpvgkkkvkrygYDTSSYNPNPTIQLDTLLHQLC 289
                  689******99999999999999999999999988778889************9999999987799******************************** PP

                  TTSEEEEE--TTBTT-S-SBSB----TTTTT--TTT....EEE--BSEEEEETTEEEEE--S-HHHH---EEESHHHHHS-HHHHHHHHHHHHTBS-- CS
  DNA_pol_E_B  79 ekttvvlvPgpnDpanstvlPqqPlprlllsrikrvfk.elklvtNPsrielnsvevvltsddivkdlkreslkesntdverlrklvktildqrhlaP 175
                  ++++v+lvPgp+D  ++ +lPqqPl+++ll++ k ++  +l+ +tNP+++++ +   +++s+++++dl++++  +s+      ++l+++++ ++h++P
   EPX73828.1 290 STVDVTLVPGPYDYSTN-ILPQQPLHPALLQNAKAWIGsSLQTTTNPTWLSIHDNLTLASSGQNIDDLRKYHPYKSS------LQLMENTILWNHITP 380
                  *****************.*****************99768*************************************......*************** PP

                  -SS.--B-GGGGGGGB-GGG---SEEE---SS--EEE CS
  DNA_pol_E_B 176 lap.tlrpvswdkddalvleplPdvlvlpdelpeFak 211
                  ++p tl++++++++d++v+++lPd++++++ +p+F++
   EPX73828.1 381 TSPdTLWCYPFTDKDTFVMDELPDLYLCGN-QPKFGT 416
                  ******************************.****75 PP

>> DNA_pol_D_N  DNA polymerase delta subunit OB-fold domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.6   0.0   2.9e-40   2.6e-36       1     130 []      28     164 ..      28     164 .. 0.97

  Alignments for each domain:
  == domain 1  score: 124.6 bits;  conditional E-value: 2.9e-40
  DNA_pol_D_N   1 QYaniYfaRleqlkprlleaakekwskeelkvnrildlkegeecivvGtiykemklkpsvlkeiakedesapqaerkkyvsekd........ellLED 90 
                  QY++iYfaRl++l+p ll aa++kw ++++++nr+ld++++++c+v+Gt y+  +lkp+v++++++ +++++++e++ yvs kd        ++ LED
   EPX73828.1  28 QYSSIYFARLTALRPKLLHAARKKW-PNHPELNRVLDVRNDQNCWVIGTAYMTSNLKPNVMDDVTQLHTIITASEDSPYVSLKDgdsdssgiQYSLED 124
                  *************************.******************************************************9766667788889***** PP

  DNA_pol_D_N  91 esgrvrLsgsgieseklvtGvvvavlGvetengdfeVedi 130
                  + grv + gs +  + +vtGvv+a+lG+e+e g+f V d+
   EPX73828.1 125 NYGRVDCAGSFMYDAGVVTGVVMAALGHEDEAGRFVVIDV 164
                  *************************************886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (470 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       296  (0.0165096); expected 358.6 (0.02)
Passed bias filter:                      280  (0.0156172); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.69u 0.36s 00:00:01.04 Elapsed: 00:00:00.59
# Mc/sec: 2387.60
//
Query:       EPX73829.1  [L=90]
Description: hypothetical protein SOCG_03047 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
       0.25   11.7   2.9       0.31   11.4   2.9    1.2  1  DUF1180        Protein of unknown function (DUF1180)
        0.4    8.9   9.9       0.43    8.8   9.9    1.0  1  Enamelin       Enamelin


Domain annotation for each model (and alignments):
>> DUF1180  Protein of unknown function (DUF1180)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   2.9   3.5e-05      0.31      21      82 ..      13      73 ..       2      89 .. 0.58

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 3.5e-05
     DUF1180 21 dasralspaasspeaepPlppgataaespgkataieaksaqaaeggngsspragsaadaggs 82
                 ++ a ++a+s+ +++ P    +taa + g   + +++++ ++ g + ssp a+s+  + +s
  EPX73829.1 13 TMALAVQAANSTANSTAPFGNATTAA-ANGTNGTNGTNGTGGGSGAESSSPSAASSLTNFSS 73
                45556677777777778885555555.44444444677777777777777777776543222 PP

>> Enamelin  Enamelin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   9.9   4.8e-05      0.43      27      73 ..      20      64 ..      17      85 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 4.8e-05
    Enamelin 27 atepsaNsTvpetNSTqpnpggsqGgNdTsptgnsaegantgsnpta 73
                a++ +aNsT+p  N+T + ++g +G N+T++tg  + ga++ s+p+a
  EPX73829.1 20 AANSTANSTAPFGNATTAAANGTNGTNGTNGTGGGS-GAES-SSPSA 64
                7899*************************9998654.4443.23333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       758  (0.0422779); expected 358.6 (0.02)
Passed bias filter:                      265  (0.0147805); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.31s 00:00:00.71 Elapsed: 00:00:00.46
# Mc/sec: 583.23
//
Query:       EPX73830.1  [L=393]
Description: GTP binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.9e-35  119.6   0.3    1.4e-34  118.1   0.3    1.8  1  YchF-GTPase_C  Protein of unknown function (DUF933)
    2.9e-18   66.0   0.0    5.7e-18   65.1   0.0    1.7  1  MMR_HSR1       50S ribosome-binding GTPase
    3.5e-05   23.4   0.0    8.6e-05   22.1   0.0    1.7  2  FeoB_N         Ferrous iron transport protein B
  ------ inclusion threshold ------
      0.032   13.2   0.0      0.069   12.1   0.0    1.5  1  MeaB           Methylmalonyl Co-A mutase-associated GTPase Me
      0.087   13.4   0.0        1.6    9.3   0.0    2.8  4  AAA_18         AAA domain
       0.11   12.3   1.3       0.24   11.2   1.3    1.6  1  RPAP1_N        RPAP1-like, N-terminal
       0.17   10.8   0.0       0.39    9.6   0.0    1.5  1  DUF2891        Protein of unknown function (DUF2891)


Domain annotation for each model (and alignments):
>> YchF-GTPase_C  Protein of unknown function (DUF933)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.1   0.3   5.4e-38   1.4e-34       1      83 [.     308     390 ..     308     391 .. 0.99

  Alignments for each domain:
  == domain 1  score: 118.1 bits;  conditional E-value: 5.4e-38
  YchF-GTPase_C   1 LitffTaGekevraWtikkgttapqaAgviHsDfekgFiraevikyedlvelgseaaakeagklrlegkdyvvqdgDiilfkf 83 
                    Li++fT+Ge+evr+Wt++kg++apqaAgviH+Dfek F++ e+++y+dlv++++e+a+++agk+ ++gk+yv++ gDi ++k+
     EPX73830.1 308 LINYFTCGEDEVRSWTVRKGIKAPQAAGVIHTDFEKAFVCGEIMHYQDLVDHKTENACRAAGKYMTKGKEYVMESGDIAHWKA 390
                    89******************************************************************************985 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.1   0.0   2.2e-21   5.7e-18       2      87 ..      24     136 ..      23     233 .. 0.87

  Alignments for each domain:
  == domain 1  score: 65.1 bits;  conditional E-value: 2.2e-21
                 EEEEESTTSSHHHHHHHHHTS.TEEESSSTTSSSSEEEEEEEETTEE.................EEEEECGGCSSHHHHHHHHHHHHHHHHC.TSEEEE CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltge.kaivsdkpgtTrdinegrvklkgke.................ielvDtpGliegaseekglgkaflalee.adlill 81 
                  +ivG+pNvGKSt+++a+t++     +++p +T+d++e++v++ +++                 +++ D++Gl +gas++ glg+afl++ + +d+i  
  EPX73830.1  24 TGIVGMPNVGKSTFFRAITKSvLGNPANYPYATIDPEEAKVAVPDERfdwlcetykpkskvpafLTIFDIAGLTKGASTGAGLGNAFLSHVRaVDAIYQ 122
                 68*******************66899***************96554477888888888899999********999*****************55***** PP

                 EEETT........T CS
    MMR_HSR1  82 vvdas........e 87 
                 vv+a         e
  EPX73830.1 123 VVRAFddaeivhvE 136
                 **977544443332 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0   3.4e-08   8.6e-05       4      48 ..      25      70 ..      22      74 .. 0.86
   2 ?   -3.3   0.0       2.2   5.7e+03      97     116 ..     216     236 ..     210     243 .. 0.59

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 3.4e-08
                EEEESTTSSHHHHHHHHHTTS.EEEEESTTSSSEEEEEEEEETTEE CS
      FeoB_N  4 alvGnpnvGkttlfnaltgak.qkvgNwpGvtvekkegklklkgke 48
                 +vG pnvGk+t+f a+t++   + +N+p  t++ +e+k+ + +++
  EPX73830.1 25 GIVGMPNVGKSTFFRAITKSVlGNPANYPYATIDPEEAKVAVPDER 70
                689***************99835789***********999876665 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 2.2
                 HHHHHHHT.TSSEEEEEETHH CS
      FeoB_N  97 Ltlqllel.gvpvvlalnmid 116
                 L+  l  l ++pvv  +nm++
  EPX73830.1 216 LINTLYLLtTKPVVYLVNMSE 236
                 444443330467777778865 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   2.7e-05     0.069      25      56 ..      17      48 ..       4      63 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.7e-05
                G-S-SEEEEEEE-TTSSHHHHHHHHHHHHHCT CS
        MeaB 25 kaGraqvvGltGvPGaGkstlvealglelrrr 56
                + G+  + G+ G+P +Gkst+  a++ ++  +
  EPX73830.1 17 RPGNNLKTGIVGMPNVGKSTFFRAITKSVLGN 48
                679999*****************999887655 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.0   0.00061       1.6       3      22 ..      26      45 ..      25      76 .. 0.84
   2 ?   -0.0   0.1      0.48   1.2e+03      47      97 ..     150     221 ..     125     251 .. 0.73
   3 ?   -2.1   0.0       2.1   5.4e+03      29      55 ..     266     292 ..     262     298 .. 0.81
   4 ?   -2.8   0.0       3.3   8.5e+03      69      82 ..     366     383 ..     338     388 .. 0.66

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00061
      AAA_18  3 ltGtpGvGKttlakeLskrl 22
                + G+p vGK+t+ +++ k+ 
  EPX73830.1 26 IVGMPNVGKSTFFRAITKSV 45
                89************998874 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.48
      AAA_18  47 deskrldedkldklldaleenss........aleegknlvidghlaeleseaakdikk.............v 97 
                 de ++ d ++++k+l++l+++ s        +  +++  +++ + + l   ++ ++k+             +
  EPX73830.1 150 DELLIKDAEFVEKHLEGLRKITSrgantlemKAKKEEQAIVERVYEFLTVNKQPIRKGqwsnrevelintlY 221
                 566677888888888888888888888888866777777888888877777776666556666655555554 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 2.1
      AAA_18  29 rdvakenglllevdpealdeskrlded 55 
                 ++va+e++l  + ++e  +e+krl+++
  EPX73830.1 266 MSVAFEERLTSMSEEEVAEECKRLQTK 292
                 578999999999999988889888776 PP

  == domain 4  score: -2.8 bits;  conditional E-value: 3.3
      AAA_18  69 s....aleegknlvidgh 82 
                 +     +++gk +v+++ 
  EPX73830.1 366 RaagkYMTKGKEYVMESG 383
                 134456888999998876 PP

>> RPAP1_N  RPAP1-like, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   1.3   9.5e-05      0.24       9      27 ..     272     290 ..     271     299 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 9.5e-05
     RPAP1_N   9 arLasMspeEIeeereeLl 27 
                 +rL sMs+eE++ee + L 
  EPX73830.1 272 ERLTSMSEEEVAEECKRLQ 290
                 8*************98885 PP

>> DUF2891  Protein of unknown function (DUF2891)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.0   0.00015      0.39     115     160 ..     167     212 ..     162     226 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00015
     DUF2891 115 leelddpeakewaealeplaeliverlkeflpkltypirvGtHsnt 160
                 l++++++ a++++ + +  +++iver+ efl   + pir G+ sn 
  EPX73830.1 167 LRKITSRGANTLEMKAKKEEQAIVERVYEFLTVNKQPIRKGQWSNR 212
                 677788889999999999************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (393 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       705  (0.0393218); expected 358.6 (0.02)
Passed bias filter:                      588  (0.032796); expected 358.6 (0.02)
Passed Vit filter:                        74  (0.00412739); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.56u 0.31s 00:00:00.87 Elapsed: 00:00:00.48
# Mc/sec: 2470.32
//
Query:       EPX73831.1  [L=281]
Description: hypothetical protein SOCG_03049 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-33  115.0   0.2    3.7e-33  114.0   0.2    1.5  1  UPF0029   Uncharacterized protein family UPF0029
    5.8e-09   36.3   2.9    7.5e-08   32.7   2.1    3.0  2  RWD       RWD domain


Domain annotation for each model (and alignments):
>> UPF0029  Uncharacterized protein family UPF0029
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.0   0.2   4.1e-37   3.7e-33       1     104 [.     153     258 ..     153     259 .. 0.95

  Alignments for each domain:
  == domain 1  score: 114.0 bits;  conditional E-value: 4.1e-37
                 TTEEEEEEEEE-SSHHHHHHHHHHH--..TT..SSEEEEEE....EE....TTEE-TTSSTSHHHHHHHHHHTTB-SEEEEEEEE--SS--HHHHHHHH CS
     UPF0029   1 kkSrFiavlaaveseeevkaileelkkenkk..athniyAyrlrqkvekvnedsdddgEpaAGkkllelLekeklenvlvvvtRwfGGikLGpgrlrai 97 
                 +kS+F a++++v+s+eev+++leel  ++k   a+hn++Ayr+ ++ ++v +d dddgE+aAG+++ +lL+ +++env+v v+RwfGG+++Gp+r+++i
  EPX73831.1 153 RKSTFAAHATRVHSPEEVQKALEELYMNKKVakANHNMVAYRVISQRGNVIQDNDDDGESAAGSRMGHLLTMMDAENVFVCVSRWFGGTHIGPDRFKHI 251
                 79*********************9876555455****************************************************************** PP

                 HHHHHHH CS
     UPF0029  98 seaarea 104
                 +++area
  EPX73831.1 252 NSTAREA 258
                 *****98 PP

>> RWD  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.7   2.1   8.4e-12   7.5e-08       2     114 ..       6      92 ..       5      94 .. 0.78
   2 ?   -3.7   0.0       1.6   1.4e+04      13      28 ..     243     258 ..     242     279 .. 0.53

  Alignments for each domain:
  == domain 1  score: 32.7 bits;  conditional E-value: 8.4e-12
                 HHHHHHHHHHHHSTTTCCCCHT--EE--S-EEEEEEECECCCC....TT-CEEEEEEEEE-SSTTSS--EEEEEECCSS-HHHHHHHHHHHHHHHHHTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RWD   2 eqeqEleaLesIypdefevienenysikleikikldededeedsefeekkkpslkleiklpeeYPeeaPiislsstenlpkeqvksleekleelaeenl 100
                   ++El aLesIyp  +  i+++ y+      ++l+ + +            +++l+ ++p eYP+++Pi+ l +   ++k+     e+ l ++a    
  EPX73831.1   6 AFQDELLALESIYPSCLLPISEKSYT------YTLSIPDS------------RVHLNLQFPIEYPDSPPIV-LDAYG-IDKAL---AEDVLLSVAT--- 78 
                 569******************98888......77777744............69***************65.44444.33333...3345555555... PP

                 TS--CHHHHHHHHH CS
                 xxxxxxxxxxxxxx RF
         RWD 101 gepvifalidwlke 114
                 g+++if++id+lke
  EPX73831.1  79 GDVCIFSYIDLLKE 92 
                 ************98 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 1.6
                 HSTTTCCCCHT--EE- CS
                 xxxxxxxxxxxxxxxx RF
         RWD  13 Iypdefevienenysi 28 
                 I pd f+ i+++  ++
  EPX73831.1 243 IGPDRFKHINSTAREA 258
                 6678887777555442 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (281 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1051  (0.0586201); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 1995.51
//
Query:       EPX73832.1  [L=475]
Description: alpha-amylase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.5e-55  187.9   0.1    5.9e-55  187.2   0.1    1.3  1  Alpha-amylase  Alpha amylase, catalytic domain
     0.0067   15.6   0.0      0.012   14.8   0.0    1.3  1  hDGE_amylase   Glycogen debranching enzyme, glucanotransferas
     0.0081   15.3   0.1      0.013   14.7   0.1    1.3  1  GHL10          Glycosyl hydrolase-like 10


Domain annotation for each model (and alignments):
>> Alpha-amylase  Alpha amylase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  187.2   0.1   9.9e-59   5.9e-55       1     337 []      45     347 ..      45     347 .. 0.89

  Alignments for each domain:
  == domain 1  score: 187.2 bits;  conditional E-value: 9.9e-59
                    --CHHHHCTCCCCCCCT-SCEEE-B-CE.......-S-TTTTSS-SCECCE-CCC--CCCCCCHHHHHHCTT-EEEEEE--SC--TTSCCCHCCHH CS
  Alpha-amylase   1 GDLkGiiekLdYlkeLGvtaiwlsPifk.......spqadhgYdiadytkidpefGtnedlkeLiskahekgikvilDlVvNHtsdehewfkeslk 89 
                    G+++Gi  kLdY++eLG ta+w+sPi+k       + q +hgY+++d   ++p+fGt++dl  L++++h++++  ++D+VvNH++ + +   ++ k
     EPX73832.1  45 GTWRGIARKLDYIQELGCTAVWISPIVKniedvtgYGQGYHGYWAQDLLDVNPHFGTKQDLIDLVQQLHDRNMLCMVDIVVNHMAHAGSGEIDYSK 140
                    89*********************************9*****************************************************9999988 PP

                    STTSGGGCCC-E......ESS-STTC-TTTTCSCEECTTTTCEEESSS-TTS-BB-TTTCCCCCCCCCCCCCCCTTT.-SEEEETTCCCTTTCCCC CS
  Alpha-amylase  90 kkgepkrdyyiwkegkeekeppnnwkslfdgsaweydekaqeyylhlflkklpdLnteneevrkelkdvvkfwlekg.idGfRlDvvkhvskveal 184
                    +   ++++ y+         p    ++++d  + e+ +      l  ++ +l d+ te++ ++   +d ++ ++e+   dG+R+D++khv+     
     EPX73832.1 141 YRPFNSEADYH---------PRRYVQNYDDTVDCETGW------LGDDTVGLMDIRTEEPRIQAFFQDWIRDLVETYhFDGLRIDTIKHVHR---- 217
                    77655555554.........222233345555555444......5569********************7777777666**************.... PP

                    HCCHCCHHHHHHHHHHHTCCGTT-EEEEE-TT-SCCCHCCCC-CGG-SICECCITTCGGGCC-CTSTTSB-SS-HHHH.HHHHHHHHHHS-CCCTT CS
  Alpha-amylase 185 esngeflheftqalnetvasrkevmtvgEvssdasedlrvyttearlelemvldfphldvaqkakikeqlksisakkl.kellkkwlkaleeaaee 279
                        ef   f +a +        v+t+gEv++++    +v  + +++ ++  +++p ++  +ka+   ql  is+k++ ++++ + ++++++ ++ 
     EPX73832.1 218 ----EFYPPFIEASK--------VFTFGEVFHGDPR--YVGDYLQYMPSS--INYPLYYQIRKAF--AQLPRISMKEFyDKAILEARAYIPD-TTV 294
                    ....******99988........89*******9985..999999999999..*****99999999..899999*999725789999*****9.9** PP

                    CEEES--TTS--HHHHTTSSTTTTHHHHHHHHHCCCTSSSEEEEETTCCCT----STT CS
  Alpha-amylase 280 avtflgnHDqeRilsrlgddsaeaekklklaaillltlrGvpviYyGeEigmtggkdp 337
                      +f++nHD +Ril +++d s      l +a+++l+ l+G+p++++G+E+ + gg+dp
     EPX73832.1 295 LGNFIENHDVPRILGMTSDSS-----LLLNALVALIYLDGIPIVFQGQEQMFVGGDDP 347
                    ********************9.....79999999********************9987 PP

>> hDGE_amylase  Glycogen debranching enzyme, glucanotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0     2e-06     0.012      23     105 ..      49     130 ..      40     134 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 2e-06
                   HHHHHHHHHHHTT--EEEES--EEE-TT--TTSEEEEEEE-TTT-.....SSC.HHHHHHHHHHHHHH--EEEEEE--SEEET CS
  hDGE_amylase  23 eWekvlkeikekgYnmiHftPlqelGesnSpYSiadqleldkelfeekdkeekeedveklvkklekeygllsltDvVlnHtan 105
                      ++l+ i+e g + +  +P+ +  e    Y    +  + ++l++ + +  +++d+ +lv++l++  ++l+++D+V nH a+
    EPX73832.1  49 GIARKLDYIQELGCTAVWISPIVKNIEDVTGYGQGYHGYWAQDLLDVNPHFGTKQDLIDLVQQLHD-RNMLCMVDIVVNHMAH 130
                   4567889999999999999999999999999999999999999998888888999********985.689***********98 PP

>> GHL10  Glycosyl hydrolase-like 10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.1   2.1e-06     0.013      71     163 ..     104     212 ..      51     228 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 2.1e-06
       GHL10  71 vLaevideahkrnlkvlaWFevglnak............elselvkahPasltvqkrdevk.tsesa....agerlwlnPliPevqdfitklvvevvkr 152
                  L +++++ h rn+  +    v  +a+            + ++  + hP + +vq+ d +     +     ++  + +    P +q f    + ++v+ 
  EPX73832.1 104 DLIDLVQQLHDRNMLCMVDIVVNHMAHagsgeidyskyrPFNSEADYHPRR-YVQNYDDTVdCETGWlgddTVGLMDIRTEEPRIQAFFQDWIRDLVET 201
                 46678888888888887766555555567777877777899999*******.556655544143333111155567788999***************** PP

       GHL10 153 YdvDgvqlDDy 163
                 Y  Dg+++D  
  EPX73832.1 202 YHFDGLRIDTI 212
                 ********965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (475 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       406  (0.0226449); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 3444.53
//
Query:       EPX73833.1  [L=909]
Description: envelope glycoprotein GP340/GP220 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (909 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1016  (0.056668); expected 358.6 (0.02)
Passed bias filter:                      297  (0.0165653); expected 358.6 (0.02)
Passed Vit filter:                       187  (0.01043); expected 17.9 (0.001)
Passed Fwd filter:                        80  (0.00446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 3.32u 0.48s 00:00:03.80 Elapsed: 00:00:00.82
# Mc/sec: 3337.91
//
Query:       EPX73834.1  [L=1325]
Description: AGC protein kinase Ppk18 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.4e-61  206.9   0.0    9.4e-40  136.6   0.0    2.3  2  Pkinase         Protein kinase domain
    4.1e-28   98.4   0.0      6e-22   78.2   0.0    2.2  2  Pkinase_Tyr     Protein tyrosine kinase
     0.0005   19.5   0.1     0.0032   16.9   0.0    2.2  3  Kinase-like     Kinase-like
     0.0018   17.1   0.1     0.0054   15.6   0.0    1.8  2  Pkinase_fungal  Fungal protein kinase
     0.0035   16.3   0.0     0.0073   15.3   0.0    1.5  1  Haspin_kinase   Haspin like kinase domain
     0.0046   16.9   0.4       0.38   10.6   0.0    2.5  2  APH             Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.011   15.9   0.1      0.025   14.7   0.1    1.6  1  Response_reg    Response regulator receiver domain
      0.012   15.0   0.0       0.14   11.5   0.0    2.1  2  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
      0.043   13.4   0.3        1.1    8.8   0.0    2.6  3  FTA2            Kinetochore Sim4 complex subunit FTA2
        0.1   11.6   0.0       0.21   10.6   0.0    1.4  1  Seadorna_VP7    Seadornavirus VP7
       0.14   12.1   0.0       0.34   10.9   0.0    1.6  1  PAS             PAS fold


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.6   0.0   5.8e-43   9.4e-40       1     148 [.     578     727 ..     578     758 .. 0.92
   2 !   67.9   0.0   5.4e-22   8.8e-19     154     264 .]     841     945 ..     823     945 .. 0.86

  Alignments for each domain:
  == domain 1  score: 136.6 bits;  conditional E-value: 5.8e-43
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHS.CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--H CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklk.hpnivrlyevfeekdelylvleyveggeladllerkgslse 97 
                 ye ++ + +G+fG+Vy  ++k+ g+ +A+K+++k ++  k++  +v +E +il   + +p+i +ly++f++kd+lylv+ey++gg+ a+ll+   +++e
  EPX73834.1 578 YEIIKPISRGTFGTVYLSKKKSVGELYAIKVLRKADMIVKNQvANVKAEKAILMAQEeSPFIAKLYYAFQSKDYLYLVMEYMNGGDCASLLKSLYTIPE 676
                 78899999****************************99998889******99888877**********************************9999*** PP

                 HHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEES CS
     Pkinase  98 eeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakel 148
                 + +k ++++++ gle+lH+ giiHrD+KpeNiL++++g+lK++DFGl++  
  EPX73834.1 677 SWVKIYLAEVVLGLEHLHKLGIIHRDIKPENILMSSNGHLKLADFGLSQMG 727
                 ***********************************************9865 PP

  == domain 2  score: 67.9 bits;  conditional E-value: 5.4e-22
                 BCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS..-HHHHHHHHHHT-SSGC CS
     Pkinase 154 ltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeasei..seeakdllkkllkkdpk 250
                  ++fvgt++YlAPE +++++ +  vD+W+lG++++e+l+g ppf++++ ++ +++++ +           + ++p  +    s ea+dl+k+ l  +p+
  EPX73834.1 841 PRKFVGTPDYLAPETIQGSNQDDMVDWWALGCVFFEFLFGYPPFHSDTPEKVFNNIVAN-----------RINWPDLDMYpcSAEALDLMKSFLLLNPE 928
                 689******************************************77777766666666...........455665544344***************** PP

                 CSTT...HHHHHTSGGG CS
     Pkinase 251 kRlt...aeellqhpyl 264
                 +Rl+   ++e+++hp++
  EPX73834.1 929 NRLGakgIQEIKAHPFF 945
                 ***9888899999*998 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.2   0.0   3.7e-25     6e-22       3     180 ..     580     756 ..     578     763 .. 0.85
   2 !   18.0   0.0   8.6e-07    0.0014     170     255 ..     849     936 ..     840     939 .. 0.84

  Alignments for each domain:
  == domain 1  score: 78.2 bits;  conditional E-value: 3.7e-25
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSS..HHHHHHHHHHHHHHHTS.-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeat..eeekeelleeakimkkl.khpnivkllgvctkeepllivteyvkgGdLlkfLrkkek 97 
                  + k + +G+fG+V+  + k    +  +  a+K+l++  +  +++ +++  e +i+++  + p i kl+ +  +++ l++v+ey++gGd  + L++   
   EPX73834.1 580 IIKPISRGTFGTVYLSKKK----SVGELYAIKVLRKADMivKNQVANVKAEKAILMAQeESPFIAKLYYAFQSKDYLYLVMEYMNGGDCASLLKSL-- 671
                  67899*********99988....777888999996544311455667777777766666***********************************98.. PP

                  TTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEE..EETTSSTSGGGGS-HHHHHHS CS
  Pkinase_Tyr  98 ekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddey..vkkeeaklpvkWmapEslkek 180
                   ++  +++  + ++v  G+e+L++  ++Hrd+   N+L+s+n + k++DfGL++   ++ +   +k++++  p  + +p +++++
   EPX73834.1 672 YTIPESWVKIYLAEVVLGLEHLHKLGIIHRDIKPENILMSSNGHLKLADFGLSQMGLSTRQFrlQKARSSLSPPSFQSPTCFTDS 756
                  89999999999*******************************************9866555544777788889999998888765 PP

  == domain 2  score: 18.0 bits;  conditional E-value: 8.6e-07
                  GGS-HHHHHHSEEEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHH.HTTEES-BBT..TSBHHHHHHHHHHT-SSGGGS--HHHH CS
  Pkinase_Tyr 170 kWmapEslkekkftsksDvWsfGvllwEiftlgespypglkneevlekl.kegkrlekpe..kcpeelyelmkkcweedpeeRptfsel 255
                   ++apE+++ ++     D W+ G + +E +  g  p+++ ++e+v++++  ++ + +  +   c++e  +lmk+ +  +pe+R   + +
   EPX73834.1 849 DYLAPETIQGSNQDDMVDWWALGCVFFEFLF-GYPPFHSDTPEKVFNNIvANRINWPDLDmyPCSAEALDLMKSFLLLNPENRLGAKGI 936
                  699*************************987.************9999944444444433225999****************9876655 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.79   1.3e+03      17      80 ..     581     643 ..     568     651 .. 0.82
   2 !   16.9   0.0   1.9e-06    0.0032     152     215 ..     685     750 ..     666     765 .. 0.75
   3 ?   -2.8   0.0       1.9   3.2e+03     231     256 ..     865     890 ..     859     896 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.79
  Kinase-like  17 gellkkgdrsvvfevkdqetgeplavkvfllpseaskkdlerlkeqelairllrgknpeqAkdh 80 
                   +++ +g ++ v++ k +  ge  a+kv    +   k+++ ++k ++  +   ++++p  Ak +
   EPX73834.1 581 IKPISRGTFGTVYLSKKKSVGELYAIKVLRKADMIVKNQVANVKAEKAILMA-QEESPFIAKLY 643
                  57899999********************999999999999999987755555.56777777765 PP

  == domain 2  score: 16.9 bits;  conditional E-value: 1.9e-06
  Kinase-like 152 qlirlaanLqakglvhgkftvdnllldekgglmlggftaLvrag...tkvvlsevekgfaPpEllgs 215
                  +++    +L+++g++h +++++n+l+  +g l+l +f+ L + g    + +l +   +++Pp + + 
   EPX73834.1 685 EVVLGLEHLHKLGIIHRDIKPENILMSSNGHLKLADFG-LSQMGlstRQFRLQKARSSLSPPSFQSP 750
                  44555589****************************96.5555511144556777788999988775 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 1.9
  Kinase-like 231 ldaWqlGlviyriwclklPltlatee 256
                  +d W+lG v +     + P+  +t+e
   EPX73834.1 865 VDWWALGCVFFEFLFGYPPFHSDTPE 890
                  699********999999999999887 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   3.3e-06    0.0054     312     343 ..     683     713 ..     675     824 .. 0.90
   2 ?   -2.7   0.3       1.2   1.9e+03     213     271 ..    1055    1129 ..    1046    1170 .. 0.56

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 3.3e-06
  Pkinase_fungal 312 lrDaIkghrsLflkagiLHrDiSenNilitds 343
                     l++++ g++ L+ k gi+HrDi  +Nil+  +
      EPX73834.1 683 LAEVVLGLEHLH-KLGIIHRDIKPENILMSSN 713
                     7899********.****************944 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1.2
  Pkinase_fungal  213 ekdddi.aeiRkgldvtka.e......kfrskrkvvsssssqe..................lsskaevklkksesskkvekrsvd 271 
                      ++ d+i +e++++l++t + +      +       vs s   +                   ss++++++k+s +s +   ++  
      EPX73834.1 1055 NAIDKIrSELKSKLHITPPaSssapnsE-------VS-SA--KvfdyqqpnspgipnfssvFSSQESTPRKASGASAEYDFKTKA 1129
                      5677888888888888877222222221.......11.11..1234455666677776664344444444444443333333222 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   4.5e-06    0.0073     124     257 ..     577     727 ..     458     737 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 4.5e-06
  Haspin_kinase 124 kevvlKviplevledvtiskelslkelkslklvkgtypglllllqdkvlkek................pdfyseqqlflvlllkdkGtdLeev.kl 202
                    +  ++K i+ ++   v  sk  s+ el  +k+++ + + ++    ++v+ ek                  f+s++ l+lv++  ++G+  + + +l
     EPX73834.1 577 DYEIIKPISRGTFGTVYLSKKKSVGELYAIKVLRKA-DMIVKNQVANVKAEKailmaqeespfiaklyYAFQSKDYLYLVMEYMNGGDCASLLkSL 671
                    455889999999999999999999999999999999.77777777777777789999999999988766777777777777777777766666556 PP

  Haspin_kinase 203 kswkqal.sifwqivkiLyvaE..tkfeFEHRdLhldniLvdknlnvtlidlklsRle 257
                     ++ + + +i+    +++   E   k+   HRd++ +niL+ +n++  l d+ ls + 
     EPX73834.1 672 YTIPESWvKIYLA--EVVLGLEhlHKLGIIHRDIKPENILMSSNGHLKLADFGLSQMG 727
                    6665554255543..333334412699999**********************999875 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.1     0.033        54      76     162 ..     124     237 ..     100     252 .. 0.75
   2 !   10.6   0.0   0.00023      0.38     159     199 ..     692     727 ..     664     731 .. 0.82

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.033
                 ----EE-SS....HHHHHHHHHHHHHHHHHHC........CHHCH.............-STTTB-SHHCHTCCHHHHHHCHHHCCCGCCTCC.HHHHHH CS
         APH  76 yvpgrsllr....klsaaqlpellealgefla........alhqv............dpaalpladflaqdlellrqlesatarllaselld.lleele 149
                   p r+l+     kl a++++e++++l +fl+        +lh +            ++  ++++d++ q  ++++q  +++   +++e +  ++ ++ 
  EPX73834.1 124 NAPSRTLWVlrpiKLFAEIKQEIGRQLTQFLGfgahllaeHLHKIkeipfsnplppfQTILCRVCDREIQ-NWFFEQHSEYCLLTHHAEARVeRANDML 221
                 56778888888999999*******************9999666663333333322224448888899999.8888888888884444444444666666 PP

                 HH...HHHHHHHH--S CS
         APH 150 eq...vlaalaallpg 162
                  +   vl++l+++l++
  EPX73834.1 222 NEqrnVLQTLLDTLDS 237
                 6567788888888875 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00023
                 H--SSS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-EEE CS
         APH 159 llpgelptvllHgDlhpgNllvdpddgrvtGviDfedaglg 199
                 +l+   + +++H+D++p N+l+   +g++  + Df+++ +g
  EPX73834.1 692 HLH---KLGIIHRDIKPENILMS-SNGHL-KLADFGLSQMG 727
                 444...799**************.66666.58888888777 PP

>> Response_reg  Response regulator receiver domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.1   1.6e-05     0.025       2      75 ..    1209    1285 ..    1208    1298 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.6e-05
                    EEESSSHHHHHHHHHHHHHTTEEEEEEESSHHHHHHHH.HHHHESEEEEESSCSSSEHHHHHHHHHHCT...TTSEEE CS
  Response_reg    2 livdDdplvrellrqlleeegyeevaeaedgkealell.keekvdlillDinmpgmdGlellkeireed...pelpvi 75  
                    +i+ D++   + l + l++ ++ ev++ +d ++ l+ l   ek+ li+l +++ +++G+ +lk +r  +   +++p i
    EPX73834.1 1209 VICVDKQSSFSELISRLRSYKF-EVTVIDDEDKILRVLmSDEKFSLIFLQLDLIRISGISILKIVRSSSspnRNTPAI 1285
                    4444555555555566899***.************99945666*********************99887555445544 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.17   2.7e+02      46      82 ..     586     623 ..     562     633 .. 0.82
   2 ?   11.5   0.0   8.8e-05      0.14     106     170 ..     665     725 ..     642     738 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.17
         Kdo  46 kdlyrfk.lgrtravrEfrllkrLeeagvavpkpvaag 82 
                 +  +    l++ ++v E+ ++k L++a + v + va  
  EPX73834.1 586 RGTFGTVyLSKKKSVGELYAIKVLRKADMIVKNQVANV 623
                 5555555588999******************9999864 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 8.8e-05
         Kdo 106 edllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDldkar 170
                 + ll++  +++e+  +  l +v    + lh++g+ H+d+ + nil+  ++    ++ l D+  ++
  EPX73834.1 665 ASLLKSLYTIPESWVKIYLAEVVLGLEHLHKLGIIHRDIKPENILMSSNG----HLKLADFGLSQ 725
                 455555555667777777888888899********************999....88888886665 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.2   0.0       6.5   1.1e+04      48      84 ..     203     237 ..     200     250 .. 0.54
   2 ?    1.6   0.0      0.11   1.8e+02      22      69 ..     576     624 ..     568     648 .. 0.70
   3 ?    8.8   0.0   0.00067       1.1     178     206 ..     683     711 ..     654     724 .. 0.79

  Alignments for each domain:
  == domain 1  score: -4.2 bits;  conditional E-value: 6.5
        FTA2  48 YALKlFrfleaeeleeaeedlkiprealkelasysdp 84 
                 Y+L+  +++ +  +e+a+++l+++r++l++l + +d+
  EPX73834.1 203 YCLL--THHAEARVERANDMLNEQRNVLQTLLDTLDS 237
                 5554..3333334445555666666666666555555 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.11
        FTA2  22 kdiefleyLgkglhsiVl..kvkirgkeYALKlFrfleaeeleeaeedlk 69 
                 +d+e+++ + +g+ + V+  k k  g+ YA+K+ r+ ++  ++++ ++ k
  EPX73834.1 576 RDYEIIKPISRGTFGTVYlsKKKSVGELYAIKVLRKADM-IVKNQVANVK 624
                 488999999999999776225566688******999944.4444444443 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.00067
        FTA2 178 lpkllrdlkklhklgIvvrDlkeenyidg 206
                 l +++  l+ lhklgI++rD+k+en++ +
  EPX73834.1 683 LAEVVLGLEHLHKLGIIHRDIKPENILMS 711
                 566677899****************9844 PP

>> Seadorna_VP7  Seadornavirus VP7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00013      0.21     154     186 ..     690     720 ..     667     726 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00013
  Seadorna_VP7 154 LmdfhsestnllhGDcnpenlmcDknGylklvD 186
                   L+++h  + +++h D++pen++  +nG lkl D
    EPX73834.1 690 LEHLH--KLGIIHRDIKPENILMSSNGHLKLAD 720
                   34444..889*********************99 PP

>> PAS  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00021      0.34      14      64 ..      21      69 ..       8     101 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00021
                EEEEETTSBEEEECHHHHHHHSSTHHHCTTSBGGGGBSTTHHHHHHHHHHH CS
         PAS 14 ifvvDedgrilyvNaaaeellGlsreevlgkslldliheeddaelaelleq 64
                ++ +  dg+ily   +++ellG++   ++gks+  l+  +d   +  + +q
  EPX73834.1 21 VLELSLDGNILYGTNNFTELLGIPGLTLVGKSIQSLLQDDDK--FTWATQQ 69
                566789****************************99986643..4444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1325 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       757  (0.0422221); expected 358.6 (0.02)
Passed bias filter:                      544  (0.0303419); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.92u 0.29s 00:00:01.21 Elapsed: 00:00:00.48
# Mc/sec: 8383.23
//
Query:       EPX73835.1  [L=438]
Description: tRNA methyltransferase Trm5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      4e-71  238.9   0.0      6e-71  238.3   0.0    1.3  1  Met_10    Met-10+ like-protein
     0.0011   18.2   0.0     0.0019   17.5   0.0    1.2  1  TRM       N2,N2-dimethylguanosine tRNA methyltransferase


Domain annotation for each model (and alignments):
>> Met_10  Met-10+ like-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  238.3   0.0   6.7e-75     6e-71       2     199 .]     131     381 ..     130     381 .. 0.95

  Alignments for each domain:
  == domain 1  score: 238.3 bits;  conditional E-value: 6.7e-75
                 EEEEETTEEEEEB-TTSSHHHHHHHHHHHHHS.S-SCEEEE-S-SBTTTTB--EEEEEES-.SEEEEEETTEEEEEETTTS---GGGHHHHHHHHTT-- CS
      Met_10   2 kfeiiGdvvilnlreelkeykkvigevildkt.kvktvlrkvsevegefRtfelevlaGsdstetihkEngcrfklDvskvyfsskleaErerlaklve 99 
                 +f+ +G+++++nlree  +yk++ig+vildk+ ++ktv++k+++++++fRtf++evlaG+ + ++++ E++c+f++D+skvy++s+l++E+ rl+++++
  EPX73835.1 131 GFTAVGHIAHMNLREEWLPYKHLIGQVILDKNpSIKTVVNKTDSIDTKFRTFQMEVLAGDPDFMVVQSESNCKFRFDFSKVYWNSRLSTEHDRLVSQFQ 229
                 799********************************************************999************************************* PP

                 TT-EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG---TT-EE............................ CS
      Met_10 100 egevVvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkvekvvkpileDgrevireqlad............................ 170
                 ege V+dv+AG+Gpfa p++k  k ++v+a+dlnP+s++ l +n++ Nkv + vk+++ Dgre+ir+ + +                            
  EPX73835.1 230 EGEAVCDVMAGVGPFACPAGK--KRVIVFANDLNPSSYESLVDNVQINKVGDFVKAYNRDGREFIRSATEEllefskqgtialpppkklakgnlkdnts 326
                 *********************..******************************************977766888************************* PP

                 ..............EEEE--TTTGGGGHHHHHHHEEEE............EEEEE CS
      Met_10 171 ..............rvvmnlpksaieFldkvlaalkdg............gvihy 199
                               ++vmnlp sa eFld+   + + +            +v+++
  EPX73835.1 327 ssskrdihippvfsHYVMNLPGSALEFLDAFNGCYEGKehlfenrslpkvHVHCF 381
                 *****************************96655555455688888998899998 PP

>> TRM  N2,N2-dimethylguanosine tRNA methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   2.1e-07    0.0019      76     117 ..     254     295 ..     244     302 .. 0.88

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 2.1e-07
                 EEEEE-S-HHHHHHHHHHHHHTT--GGEEEE-S-HHHHHC-- CS
         TRM  76 evlaNDisekAvelikeNvklneveeivvineddAnvllaek 117
                  v+aND+++  +e++  Nv++n+v + v++ + d + ++++ 
  EPX73835.1 254 IVFANDLNPSSYESLVDNVQINKVGDFVKAYNRDGREFIRSA 295
                 489****************************99*99999854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (438 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       370  (0.020637); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.45
# Mc/sec: 2924.23
//
Query:       EPX73836.1  [L=452]
Description: hypothetical protein SOCG_03054 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-81  272.0   4.9    4.4e-81  271.2   4.9    1.4  1  UPF0300   Uncharacterised protein family (UPF0300)


Domain annotation for each model (and alignments):
>> UPF0300  Uncharacterised protein family (UPF0300)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  271.2   4.9   2.4e-85   4.4e-81       2     212 .]     161     371 ..     160     371 .. 0.99

  Alignments for each domain:
  == domain 1  score: 271.2 bits;  conditional E-value: 2.4e-85
     UPF0300   2 lkkfeelfkelseflekgniplsvLihhvmLYdyYpeelkdalWkAvevyvseqvssgkytklhvkaaqkklgdiRlyLvkpediyvvknssdWiaisn 100
                 ++++++++++l++++++g++plsvL+hhvmLYdyY+ee++d+lW+A++ +v++qv+ ++++ l+++a+++klgdiR+y+++p d+yv  +s +W+++++
  EPX73836.1 161 MNYSSKIYRKLFDYFKQGKAPLSVLVHHVMLYDYYSEEFQDVLWSATQCHVMHQVRLNRASLLQARACYQKLGDIRMYFIDPVDMYVPPDSLNWLIVCT 259
                 78999********************************************************************************************** PP

     UPF0300 101 knFqcyiqleekleekklksekskieelasvaeseeelgWLllllsigsnasafPihaYlnakkkllesklpesllllrkeDellfqdkeeieeleell 199
                 knFq+++ql++++++kkl++++sk+ +la++a+s+++l+WL+++lsig+na afPih Yl+akk l+ s++p++++++r+ D++lf++ ++ +++ e++
  EPX73836.1 260 KNFQALVQLRHTMDAKKLFQRRSKYLALAQFATSSCDLSWLCMMLSIGRNACAFPIHGYLSAKKVLYPSIIPDNVFCMRQVDSVLFKEIHSMHQFLEFQ 358
                 *************************************************************************************************** PP

     UPF0300 200 kelledlakcesf 212
                  +l++dl++c++f
  EPX73836.1 359 GRLFMDLQDCQTF 371
                 **********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (452 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       535  (0.0298399); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.72u 0.35s 00:00:01.06 Elapsed: 00:00:00.60
# Mc/sec: 2267.64
//
Query:       EPX73837.1  [L=321]
Description: S-malonyltransferase Mct1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      4e-14   52.9   0.0      6e-14   52.3   0.0    1.2  1  Acyl_transf_1  Acyl transferase domain


Domain annotation for each model (and alignments):
>> Acyl_transf_1  Acyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.3   0.0   3.3e-18     6e-14       3     221 ..       8     244 ..       7     278 .. 0.76

  Alignments for each domain:
  == domain 1  score: 52.3 bits;  conditional E-value: 3.3e-18
                    EE--TT---TTTTCCHHHC-HHHHHHHHHHHHHCCHHHT--HHH.HHHS--TTGGG..SHHHHHHHHHHHHHHHHHHH.HHTT-TTSEEEE-TTHH CS
  Acyl_transf_1   3 vfsGqGsQwaGMGmeLlktskafaaviaradeafksqygfsvld.vlrnnpeglld..aiqfvqpaLaavqialaell.kskGvrpaavvGHSlGE 94 
                    +f+GqG  w+   m+ + ++k   +++ +a+e+     gf +   +l+++p  +l   ++  vqpa+ a  ++l+  + +  G    +++GHSlGE
     EPX73837.1   8 LFPGQGVEWRR-SMQSYLSNKTVENTLIEAEEV----GGFPLRSyILDAKPDYELPklGTMIVQPAILACSVGLFRAFlQRNGS-SCLFAGHSLGE 97 
                    59999999985.566666778888888888875....6888854277777876664226899************9765388885.68********* PP

                    HHHHHHCCSSSHHHHHHHHHHHHHHHHHH...T.S-EECCEECS...........HHHHHHH...TT.EEEEEEECCCCECCEEHHHHHHHHHHHH CS
  Acyl_transf_1  95 lAaavvagalsseeallavvlrsrlmmql...a.gpgdmaavel..........aeeeeklr.cqddvvgavansprrvvisgsqealrelvervs 175
                    ++a+v+   ls   al+ v +r + m ++   +  +  m+a++l          +    k++  +  +  a  ns r++v+sg+ e+l  l + ++
     EPX73837.1  98 YSALVASRVLSFPTALKLVTTRAKAMDEAcqiTkEKTSMLALTLfnrpayptkfQDDVIKAKePFSFIDIANINSSRQIVLSGKFEELVTLANSIQ 193
                    *************************9865222446778999999855544432211112222223334567889*****************99999 PP

                    HCC.CCEEECCCE.....ECTTCCCCCCCCHHHHHHHHCCCHHCHHTTBEH CS
  Acyl_transf_1 176 kegvgalvenvnv.....avhspqvdaiadalasaladiaprkpkvakiss 221
                     ++    +++vn      a+hs+++ ++ ++l+ al +   ++  v+  ss
     EPX73837.1 194 SNTANLGRVRVNWldvagAFHSRYMFPALQQLKDALSKTEFHTRDVTIQSS 244
                    9885444444432222338*****************998877777766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       480  (0.0267723); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.36s 00:00:00.99 Elapsed: 00:00:00.56
# Mc/sec: 1737.15
//
Query:       EPX73838.1  [L=128]
Description: ribosomal-ubiquitin fusion protein Ubi1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.5e-34  116.4   0.6    4.9e-34  115.9   0.6    1.2  1  ubiquitin       Ubiquitin family
    5.7e-30  103.0  12.9    8.7e-30  102.4  12.9    1.3  1  Ribosomal_L40e  Ribosomal L40e family
    2.2e-16   59.4   0.7      3e-16   59.0   0.7    1.2  1  Rad60-SLD       Ubiquitin-2 like Rad60 SUMO-like
      2e-05   24.9   0.1    7.4e-05   23.1   0.1    1.8  1  Ubiquitin_2     Ubiquitin-like domain
     0.0033   17.8   0.0     0.0055   17.0   0.0    1.4  1  Ubiquitin_5     Ubiquitin-like domain
     0.0038   17.1   0.0     0.0051   16.7   0.0    1.3  1  TBK1_ULD        TANK binding kinase 1 ubiquitin-like domain
     0.0043   17.1   0.1     0.0099   16.0   0.1    1.6  1  Rad60-SLD_2     Ubiquitin-2 like Rad60 SUMO-like
  ------ inclusion threshold ------
      0.013   15.5   1.0        4.2    7.5   0.2    2.2  2  Ubiquitin_4     Ubiquitin-like domain
      0.019   15.5   0.1      0.026   15.1   0.1    1.3  1  DUF2407         DUF2407 ubiquitin-like domain
      0.077   12.8   0.0       0.11   12.3   0.0    1.2  1  Sde2_N_Ubi      Silencing defective 2 N-terminal ubiquitin do


Domain annotation for each model (and alignments):
>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.9   0.6   2.7e-37   4.9e-34       1      72 []       3      74 ..       3      74 .. 0.99

  Alignments for each domain:
  == domain 1  score: 115.9 bits;  conditional E-value: 2.7e-37
                EEEEETTSEEEEEEEETTSBHHHHHHHHHHHHTSSGGGEEEEETTEEE-TTSBHGGHTTSTTEEEEEEESSC CS
   ubiquitin  1 itvktldgkkitleveesdtveelKekiaekegipaeqqrLiysGkvLedertleeygiqdgstlhlvlrlr 72
                i+vktl+gk+itleve+sdt++++K ki++kegip++qqrLi++Gk+Led rtl++y+iq++stlhlvlrlr
  EPX73838.1  3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74
                9********************************************************************986 PP

>> Ribosomal_L40e  Ribosomal L40e family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.4  12.9   4.8e-33   8.7e-30       1      50 []      78     127 ..      78     127 .. 0.99

  Alignments for each domain:
  == domain 1  score: 102.4 bits;  conditional E-value: 4.8e-33
  Ribosomal_L40e   1 iepsLrqLAqKyncdKmiCrkCYArlpprAtnCrkkkCghsnnlrpKKkl 50 
                     iepsL++LA+K+nc+K+iCrkCYArlpprAtnCrkkkCgh+n+lrpKKkl
      EPX73838.1  78 IEPSLKALASKHNCEKQICRKCYARLPPRATNCRKKKCGHTNQLRPKKKL 127
                     8***********************************************96 PP

>> Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.0   0.7   1.7e-19     3e-16       1      72 []       1      71 [.       1      71 [. 0.98

  Alignments for each domain:
  == domain 1  score: 59.0 bits;  conditional E-value: 1.7e-19
                EEEEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEEETTEE--TTSBGGGSS--TTEEEEEEX CS
   Rad60-SLD  1 ikiilkgkdgkevkikVkptttvskLieayrkkkgipeeqkvrLiFDGeeLdpnstvedldiedgdtidvvi 72
                ++i++k+ +gk+++++V+++ t+ +++++ ++k+gip+ +++rLiF G++L++  t+ d+ i++++t+++v+
  EPX73838.1  1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPP-DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 71
                89************************************.******************************996 PP

>> Ubiquitin_2  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.1   4.1e-08   7.4e-05      15      80 ..      12      69 ..       1      70 [. 0.85

  Alignments for each domain:
  == domain 1  score: 23.1 bits;  conditional E-value: 4.1e-08
                 EEEEEEETTSBHHHHHHHHHHHH---TTCEEEEEE.-SSSSEEECSSGCCSBCCCCT--TTEEEEE CS
  Ubiquitin_2 15 sserrfsksltieelKekLelitGtspasmrLqlyddkkdnevsklddddalLgsYgvkdgmrihV 80
                   +  +++s+ti+++K+k++   G++p+++rL +          k  +d ++L++Y+++  +++h 
   EPX73838.1 12 TITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFA--------GKQLEDGRTLSDYNIQKESTLHL 69
                 556678899************************99........5667899**********999995 PP

>> Ubiquitin_5  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   3.1e-06    0.0055      34      92 ..      13      72 ..       4      76 .. 0.83

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 3.1e-06
  Ubiquitin_5 34 klletkLdvtgkelvskiaeefglkensiKlilngklleldktLeeQgvknnskv.mvLk 92
                  +le++ + t +++ ski ++ g+  ++ +li  gk+le ++tL + +++++s + +vL+
   EPX73838.1 13 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLhLVLR 72
                 566666677888999999******99***********************99987546666 PP

>> TBK1_ULD  TANK binding kinase 1 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   2.9e-06    0.0051      19      53 ..      17      51 ..       3      72 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 2.9e-06
    TBK1_ULD 19 ihpyntvaifqeevakqTkiaaekQellfeghrll 53
                +++ +t++++  +++++  i++++Q l+f g++l 
  EPX73838.1 17 VESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLE 51
                6789****************************973 PP

>> Rad60-SLD_2  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.1   5.5e-06    0.0099      13      88 ..      11      72 ..       2      99 .. 0.66

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 5.5e-06
                 -EEEEEEEETT-BHHHHHHHHHHHS-TT-SSS--SCCCEEEEETTEEE-TTSBCCCCS-TTTTTTTS-EEEEEEE- CS
  Rad60-SLD_2 13 sDigpvkfsdaatvaelkekviaqWPkdkeekpksvndlklilaGkiLennktlkelrlplgevkggvtvmHvvvr 88
                 + +  ++ ++++t++++k k+     +dke  p  +++ +li aGk Le+ +tl++++++        +++H+v+r
   EPX73838.1 11 K-TITLEVESSDTIDNVKSKI-----QDKEGIP--PDQQRLIFAGKQLEDGRTLSDYNIQKE------STLHLVLR 72
                 5.5556667777777777777.....4555533..34559*****************55433......45777765 PP

>> Ubiquitin_4  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.2    0.0024       4.2       1      32 [.       1      32 [.       1      36 [. 0.94
   2 ?    6.8   0.0    0.0037       6.6      58      86 ..      43      70 ..      39      73 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0024
  Ubiquitin_4  1 lkvtvkkldgeslevvvkqnatvkdLkkaier 32
                 +++ vk l g+++ ++v+++ t+ ++k  i+ 
   EPX73838.1  1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD 32
                 7899*************************997 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0037
  Ubiquitin_4 58 LsfegekLkddkaklkeygirnkselsFv 86
                 L+f g++L+ d  +l++y i+++s+l+ v
   EPX73838.1 43 LIFAGKQLE-DGRTLSDYNIQKESTLHLV 70
                 889999986.6789************976 PP

>> DUF2407  DUF2407 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   0.1   1.4e-05     0.026      14      72 ..      13      78 ..       9     126 .. 0.72

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.4e-05
     DUF2407 14 leLdipdpntttvagLkqliRerlpaelasrrLrLIyaGrlLedttslasslklpees...........v 72
                ++L+++  ++ t+ ++k  i ++    +   + rLI+aG+ Led  +l++   ++e++            
  EPX73838.1 13 ITLEVE--SSDTIDNVKSKIQDKE--GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTlhlvlrlrggiI 78
                566666..6789999999999987..67777789**************9854444333455555555550 PP

>> Sde2_N_Ubi  Silencing defective 2 N-terminal ubiquitin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   6.4e-05      0.11       2      88 ..       2      76 ..       1      77 [. 0.85

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 6.4e-05
  Sde2_N_Ubi  2 nvlvssfdgltlpstlsltlpstatvsdlvdklserlpeslkesliLttvsnkqlllssdvslssllassadsellslrllvrlrGG 88
                +++v+++ g+    t++l++ s+ t+ ++ +k++++      +   L  + + ql  ++  +ls++  ++++    +l+l++rlrGG
  EPX73838.1  2 QIFVKTLTGK----TITLEVESSDTIDNVKSKIQDKEGIPPDQ-QRLIFAGK-QL--EDGRTLSDYNIQKES----TLHLVLRLRGG 76
                8999*99996....999*****************998877555.45555554.66..99999****999999....99********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       830  (0.0462937); expected 358.6 (0.02)
Passed bias filter:                      431  (0.0240393); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.56u 0.34s 00:00:00.90 Elapsed: 00:00:00.54
# Mc/sec: 717.22
//
Query:       EPX73839.1  [L=356]
Description: isocitrate dehydrogenase subunit 1 Idh1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.5e-80  268.9   0.0    8.1e-80  268.6   0.0    1.0  1  Iso_dh    Isocitrate/isopropylmalate dehydrogenase


Domain annotation for each model (and alignments):
>> Iso_dh  Isocitrate/isopropylmalate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  268.6   0.0   4.5e-84   8.1e-80       1     348 []      22     349 ..      22     349 .. 0.93

  Alignments for each domain:
  == domain 1  score: 268.6 bits;  conditional E-value: 4.5e-84
                 EEEEEEESTTHHHHHHHHHHHHHHHHHHHT-EEEEEE---TH.HHHHHHSSSS-HHHHHHHHHSSEEEEEE---CS.SSSSSHHHHHHHHHHHTTEEEE CS
      Iso_dh   1 kiallegdgiGpevveaalkvlkaakekaglelefeevdvGg.aaidetgeplpeetleaikeadvvllgavgtpk.ekevrpengLlaLrkeldlfan 97 
                 k++l++gdg+G+e +++++ ++kaa+   +  +efee+dv g   +d+  +   +e+++++k+++v l+g   tp  ++++++ n  +aLrkeldlfa 
  EPX73839.1  22 KVTLIPGDGTGKELSNSVSTIFKAAN--VP--VEFEEIDVTGmDKRDKPTDVSLHEAIQSLKRNKVGLKGIFYTPSeRNGHSSFN--VALRKELDLFAS 114
                 799**********************9..55..88999998651566666666679********************9788999999..************ PP

                 EEEEE-BCCTTCCSSBTHHHHCT-EEEEEEE-SSCGGCSSEEEEETTG.GGGEEEEEEEEEHHHHHHHHHHHHHHHHHTTTSEEEEEESTTTTHHHH.H CS
      Iso_dh  98 lrpvkvfeklkvksplkrevveevdlvivReltggiYfgeekekkgsifteevavdtklyseeeieriaraafelAlkrgkkkvtlvdKanvlksse.l 195
                 l  +k ++  +vk+       ++vd+ ++Re+t+g Y+g e++         v+ ++k ++e  ++ria++af+ Alk+++k+vt+++Kan++k+++ l
  EPX73839.1 115 LSLIKNIP--GVKTR-----HNGVDFALIRENTEGEYSGLEHQSVPG-----VVESLKIITEPKSKRIAQFAFDFALKNNRKSVTCIHKANIMKMADgL 201
                 *9999983..44433.....357**********************97.....899******************************************** PP

                 HHHHHHHHHCCTTTTSEEEEEEHHHHHHHHHHSGGGGSEEEE-HHHHHHHHHHHHHHTTSGCC-EEEEEETSS-EEEEE.SS---CCCTTSS-S-THHH CS
      Iso_dh 196 wrkiveevaeeeypdielehqlvDsaamqlvkspkqfdVivtkNlfGDilSDeaaalvGslGllpSaslgekkvaifEa.vHGsapdiagkdkaNpiav 293
                 +rk+++++a+ +y+ i+ ++ +vD+a mq+v +p+qfdV+vt+Nl+G ilS   + lvG+ G++p+ + g +++a+fE+ +  +   i g++ aNp+a+
  EPX73839.1 202 FRKTFYNTAA-NYQSITANDLIVDNASMQAVSRPQQFDVLVTPNLYGSILSNIGSGLVGGPGVVPGGNFG-HEHALFEPgCRHTQLHITGRNEANPTAM 298
                 **********.***********************************************************.79*****97788999************* PP

                 HHHHHHHHHHTTT-HHHHHHHHHHHHHHHHH.TSCCHHHCTTSTCCCHHHHHHHHH CS
      Iso_dh 294 ilSaalmLryslgleeaAdkiekAvekvlea.givTkDlageaakevstsefgdav 348
                 ilSa +mLr+ lgl+e Ad i++A  +v+e+ ++vTkDl g+a    +t+ef+ a+
  EPX73839.1 299 ILSACMMLRH-LGLKEYADLINAATYSVIEDgKTVTKDLNGTA----NTEEFTRAI 349
                 **********.********************899*********....999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       362  (0.0201908); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.31s 00:00:00.89 Elapsed: 00:00:00.51
# Mc/sec: 2103.93
//
Query:       EPX73840.1  [L=758]
Description: HECT-type ubiquitin-protein ligase E3 Pub1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      3e-96  322.5   0.1    4.4e-96  322.0   0.1    1.2  1  HECT      HECT-domain (ubiquitin-transferase)
    1.1e-35  121.3  19.5    1.5e-12   47.4   5.0    3.6  3  WW        WW domain
    1.2e-19   70.5   0.1    4.2e-19   68.7   0.1    2.0  1  C2        C2 domain


Domain annotation for each model (and alignments):
>> HECT  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  322.0   0.1  7.3e-100   4.4e-96       1     305 [.     454     756 ..     454     758 .] 0.97

  Alignments for each domain:
  == domain 1  score: 322.0 bits;  conditional E-value: 7.3e-100
                 HHHHHHHT-GGGSSEEESSTTSSSEEE-TTHHHHS.....HHHHHHHHHHHHHTT--BSS-B-HHHHHHHTT-.---TCHHHHH-HHHHHHHHHHH..H CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT   1 tllskelldpklglfeeesedsgtlypkpssseee.llklfeflGkvlGkaiyeeilldlpfsraflkfllgeekitledleeidpelakslkellsle 98 
                 +lls+e+++p + lfe++s+d++tl+++p s  +  +l++f+f+G+v+G+a+++++ +d  f   f+k++l+ +k tl+d+e++d e+++sl ++l  +
  EPX73840.1 454 YLLSHEMFNPFYCLFEYSSMDNYTLQINPHSGINPeHLNYFKFIGRVIGLAVFHRRFVDAFFVVSFYKMILQ-KKTTLQDMESMDAEYYRSLVWIL--K 549
                 689**************************98776698899********************************.6**********************..6 PP

                 S-GGG...GT-BSEEEEE.TTEEEEEESSTTGGGSB--TTTHHHHHHHHHHHHHTGGGHHHHHHHHHHHHTTS-HHHHTTS-HHHHHHHHBCSSS.--H CS
                 xxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT  99 snteevedlaLtFtipen.agasatieLipnGanipVtnenkkeYiklyvnyllkksvekqleaflkGfsevipskalklfdaeelellisGedelidv 196
                 ++ +    l+LtF+++ n +g+  ti+L+p+G+ni+Vt+enkkeY++l++ ++++k++e q++af++Gfse+ip++++++fd++elelli G +e +d+
  EPX73840.1 550 NDIT--GILDLTFSVEDNcFGEVVTIDLKPDGRNIEVTEENKKEYVDLVTVWRVEKRIEDQFNAFHEGFSELIPQDLINVFDERELELLIGGISE-VDM 645
                 6775..45**************************************************************************************9.*** PP

                 HHHHHTEEEETT--TTSHHHHHHHHHHHHS-HHHHHHHHHHHHSSSS--TTCGGG-.....B--EEEEE-S..-TTS--EEEGGGTEEEE---SSHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT 197 edlrrnteykggynaesetiewlweilkefspeekrlfLqFvTgssrlPlgGfael.....hpkftierkskedetrLPtahTCfnlLklpdYsskeil 290
                 +d+ ++t y++ y +++ +i+w+we ++e+s+e+k+++LqF+Tg+sr+P++Gf+ l      ++ftie+++  + ++LP+ahTCfn+L+lp+Y sk+ l
  EPX73840.1 646 DDWLKHTDYRS-YCENDAVIKWFWELMNEWSNEKKSRLLQFTTGTSRIPVNGFKDLqgsdgPRRFTIEKSG--EASKLPKAHTCFNRLDLPPYVSKQDL 741
                 *********87.999********************************************999*******88..99************************ PP

                 HHHHHHHHHHHH--X CS
                 xxxxxxxxxxxxxxx RF
        HECT 291 kekLltAieetegFe 305
                   kL +A+eet gF+
  EPX73840.1 742 DHKLSIAVEETIGFG 756
                 **************8 PP

>> WW  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.1   1.6   1.1e-14   6.8e-11       1      31 []     199     228 ..     199     228 .. 0.98
   2 !   47.4   5.0   2.4e-16   1.5e-12       1      31 []     281     310 ..     281     310 .. 0.99
   3 !   40.6   0.3   3.2e-14   1.9e-10       1      31 []     338     367 ..     338     367 .. 0.99

  Alignments for each domain:
  == domain 1  score: 42.1 bits;  conditional E-value: 1.1e-14
                 X-TTEEEEE-TTTT-EEEEETTT--EESS-- CS
          WW   1 LPpGWeeqwdpdsGrvYYyNheTgetqWekP 31 
                 LPpGWe ++d   Gr+YY++h+T+ t+W +P
  EPX73840.1 199 LPPGWERRTDNL-GRTYYVDHNTRSTTWIRP 228
                 8***********.****************99 PP

  == domain 2  score: 47.4 bits;  conditional E-value: 2.4e-16
                 X-TTEEEEE-TTTT-EEEEETTT--EESS-- CS
          WW   1 LPpGWeeqwdpdsGrvYYyNheTgetqWekP 31 
                 LPpGWe++++p+ Gr+Y+++h+T++t+W++P
  EPX73840.1 281 LPPGWEQRYTPE-GRPYFVDHNTRTTTWVDP 310
                 8***********.****************99 PP

  == domain 3  score: 40.6 bits;  conditional E-value: 3.2e-14
                 X-TTEEEEE-TTTT-EEEEETTT--EESS-- CS
          WW   1 LPpGWeeqwdpdsGrvYYyNheTgetqWekP 31 
                 LP+GWe++ + +  rvY+++h+T++t+W++P
  EPX73840.1 338 LPSGWEMRLTNT-ARVYFVDHNTKTTTWDDP 367
                 8***********.*****************9 PP

>> C2  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.7   0.1   7.1e-23   4.2e-19       2      90 ..       9      97 ..       8     113 .. 0.91

  Alignments for each domain:
  == domain 1  score: 68.7 bits;  conditional E-value: 7.1e-23
                EEEEEEEEEESSSSSSTTSSCEEEEEEEEECEEEEEE-SCSSSSSSEEEEEEEEEESCHTTSEEEEEEEEECSSSTEE..EEEEEEEEGHH CS
          C2  2 klevtvieAknLpnkdkkgssdpyvkvsldgkqkakTrviknslnPvWnekftfevaeleeakLeveVfdndrlskdd..fiGkveiplst 90
                +l+vtv+ A +L ++d+++ +dp++++++dg+q++ T+ ik++lnP Wne+f+++v+e  ++++ +++fd+++++k+   f+G++++++ +
  EPX73840.1  9 TLRVTVVAADGLYKRDVFRFPDPFAVLTVDGEQTHTTTAIKKTLNPYWNETFEVNVSE--NSTIAIQIFDQKKFKKKGqgFLGVINVRIGD 97
                79********************************************************..*************8444458******99887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (758 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       568  (0.0316805); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.63u 0.32s 00:00:00.95 Elapsed: 00:00:00.47
# Mc/sec: 4896.46
//
Query:       EPX73841.1  [L=439]
Description: hypothetical protein SOCG_03059 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-09   37.3   2.1    3.9e-09   35.8   2.1    1.8  1  SKG6      Transmembrane alpha-helix domain
  ------ inclusion threshold ------
       0.01   15.7   3.2      0.022   14.6   0.6    2.4  2  Mid2      Mid2 like cell wall stress sensor
      0.012   15.5   0.0      0.012   15.5   0.0    3.1  2  TMEM154   TMEM154 protein family
      0.013   15.0   1.0      0.023   14.2   0.8    1.5  1  Rax2      Cortical protein marker for cell polarity
      0.019   14.3   0.1      0.037   13.4   0.1    1.4  1  SCF       Stem cell factor
          4    7.2   5.0        6.8    6.5   5.0    1.3  1  FixS      Cytochrome oxidase maturation protein cbb3-type


Domain annotation for each model (and alignments):
>> SKG6  Transmembrane alpha-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.8   2.1   1.3e-12   3.9e-09       5      36 ..     160     191 ..     156     192 .. 0.91

  Alignments for each domain:
  == domain 1  score: 35.8 bits;  conditional E-value: 1.3e-12
        SKG6   5 snsntvaIavaVaVPVaViiivLlailifvrR 36 
                 sn+++v I++aVa+P++V++i+++ + +f+ R
  EPX73841.1 160 SNHKSVVIGCAVAIPIGVVLILIALGILFWKR 191
                 69*********************999998855 PP

>> Mid2  Mid2 like cell wall stress sensor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.1      0.12   3.6e+02      75     123 ..      84     135 ..      81     149 .. 0.71
   2 ?   14.6   0.6   7.5e-06     0.022      34      70 ..     151     189 ..     137     201 .. 0.65

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.12
        Mid2  75 skrtdfidsdGkvita.Ykt..nkltklwkallGkkiteeyesdsPlGssls 123
                 +++ d + s G ++ + Y+   + +tk+ ++ + +  + ++++ sP  s +s
  EPX73841.1  84 PSSSDLVSSSGTIVSSvYSDgpSFVTKISTSYVSHTGSPNWNTSSPASSTSS 135
                 5678899999999875265422568889999999888999999999665333 PP

  == domain 2  score: 14.6 bits;  conditional E-value: 7.5e-06
        Mid2  34 nkskssGLskknrniviGcvvGi..gvPlllvillllyi 70 
                  +++++G  +  + +viGc v i  gv l+l+ l +l+ 
  EPX73841.1 151 ASDSKKGSGSNHKSVVIGCAVAIpiGVVLILIALGILFW 189
                 3466788889999*******9872255555555555554 PP

>> TMEM154  TMEM154 protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -7.9  10.1         6   1.8e+04       9      20 ..      39      50 ..       2      95 .. 0.52
   2 ?   15.5   0.0   4.1e-06     0.012      22      98 ..     124     208 ..     105     219 .. 0.57

  Alignments for each domain:
  == domain 1  score: -7.9 bits;  conditional E-value: 6
     TMEM154  9 dtaletatleee 20
                +++ ++  ++++
  EPX73841.1 39 SSTAPSSSTDNN 50
                222222222222 PP

  == domain 2  score: 15.5 bits;  conditional E-value: 4.1e-06
     TMEM154  22 adatsaasteseslkqeeakeslssaelsnesdqlel......vl..miiiPl.vllillllvviiliqkkkrkrsKddekseaes 98 
                  +++s+as+ ++s + + +    +s++l+ +s + +       v+   ++iP  v+lil+ l +++     + kr+K +  +e+e+
  EPX73841.1 124 WNTSSPASS-TSSHPLSSKTSLSASGHLASDSKKGSGsnhksvVIgcAVAIPIgVVLILIALGILFWKRLQRAKRIKAERMQEVEE 208
                 333444444.3444433444445555555554443333344424433599**835555555555555556677999*999988875 PP

>> Rax2  Cortical protein marker for cell polarity
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.8   7.6e-06     0.023     140     194 ..     131     196 ..      44     209 .. 0.70

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 7.6e-06
        Rax2 140 fleksnsfssssdlk..........kkkkklsrgfVVlIgLAlALgtvallgllgiilay.irkkr 194
                  + +s+ +ss+++l+          k+++  ++ +V++ + A+ +g+v++l  lgi++   +++ +
  EPX73841.1 131 SSTSSHPLSSKTSLSasghlasdskKGSGSNHKSVVIGCAVAIPIGVVLILIALGILFWKrLQRAK 196
                 22233333333333355566677668888889999999999999************9855344433 PP

>> SCF  Stem cell factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   1.2e-05     0.037     197     257 ..     149     208 ..     108     212 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1.2e-05
         SCF 197 dssssnrkalgsisdsslqwiaialpsllslliGfilGalywkkkqpklkleveniqinee 257
                   +s+ +k  gs ++s + + a+a+p  + l+   +lG l+wk+ q+ ++ ++e +q  ee
  EPX73841.1 149 HLASDSKKGSGSNHKSVVIGCAVAIPIGVVLI-LIALGILFWKRLQRAKRIKAERMQEVEE 208
                 33677789999999999********9777665.589******************9998776 PP

>> FixS  Cytochrome oxidase maturation protein cbb3-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   5.0    0.0023       6.8       5      23 ..     171     189 ..     170     190 .. 0.94

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0023
        FixS   5 lLiplSlllgllalaaFlW 23 
                 + ip+ ++l+l+al++++W
  EPX73841.1 171 VAIPIGVVLILIALGILFW 189
                 57***************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (439 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       984  (0.0548832); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        84  (0.00468515); expected 17.9 (0.001)
Passed Fwd filter:                        23  (0.00128284); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.87u 0.36s 00:00:01.23 Elapsed: 00:00:00.51
# Mc/sec: 2599.40
//
Query:       EPX73842.1  [L=424]
Description: ubiquitin-protein ligase E3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.6e-24   84.5   5.3    3.6e-24   84.5   5.3    4.2  5  zinc_ribbon_6  Zinc-ribbon
    9.2e-19   67.7  26.2    9.2e-19   67.7  26.2    3.9  3  zf-CHY         CHY zinc finger
    8.6e-08   32.4   7.2    8.6e-08   32.4   7.2    5.6  5  zf-RING_2      Ring finger domain
    0.00021   21.2   8.8    0.00021   21.2   8.8    6.7  6  zf-RING_5      zinc-RING finger domain
    0.00039   20.2   5.9    0.00039   20.2   5.9    5.2  6  zf-C3HC4_2     Zinc finger, C3HC4 type (RING finger)
     0.0029   17.3   1.8     0.0029   17.3   1.8    3.9  3  zf-RING_11     RING-like zinc finger


Domain annotation for each model (and alignments):
>> zinc_ribbon_6  Zinc-ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   4.2       3.8   1.1e+04      28      37 ..     152     161 ..     143     172 .. 0.75
   2 ?   -4.0   3.5       5.2   1.6e+04      24      35 ..     204     215 ..     179     219 .. 0.60
   3 ?   -9.6  11.1         6   1.8e+04      25      53 ..     205     232 ..     190     236 .. 0.60
   4 ?   -4.2   0.6         6   1.8e+04      47      54 ..     245     252 ..     244     252 .. 0.75
   5 !   84.5   5.3   1.2e-27   3.6e-24       2      59 .]     321     378 ..     320     378 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 3.8
  zinc_ribbon_6  28 vkilCnDCek 37 
                    +k  C DC++
     EPX73842.1 152 CKKQCADCKQ 161
                    4556888875 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 5.2
  zinc_ribbon_6  24 knkkvkilCnDC 35 
                    ++++++ +Cn C
     EPX73842.1 204 RKSMARYYCNKC 215
                    233333444444 PP

  == domain 3  score: -9.6 bits;  conditional E-value: 6
  zinc_ribbon_6  25 nkkvkilCnDCekksevkfhvlglkCkeC 53 
                    +++++ +Cn C+   + + +  ++ C+ C
     EPX73842.1 205 KSMARYYCNKCKLWDDDPSKSSYH-CDDC 232
                    455666677776555555544444.4444 PP

  == domain 4  score: -4.2 bits;  conditional E-value: 6
  zinc_ribbon_6  47 glkCkeCg 54 
                    +  Ck+Cg
     EPX73842.1 245 YYHCKTCG 252
                    56799995 PP

  == domain 5  score: 84.5 bits;  conditional E-value: 1.2e-27
  zinc_ribbon_6   2 dmeayfraldaeiaeqpmpeeyknkkvkilCnDCekksevkfhvlglkCkeCgSYNTr 59 
                    +++++fr ld+e+++qpmp  y++++ +i+CnDC+++s++++h+lg+kCk+C+SYNT+
     EPX73842.1 321 NVNSMFRILDMEVERQPMPYPYNTWISTIHCNDCSSRSDTNYHFLGHKCKSCHSYNTC 378
                    8999*****************************************************7 PP

>> zf-CHY  CHY zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.7  26.2   3.1e-22   9.2e-19       1      75 []     145     218 ..     145     218 .. 0.99
   2 ?  -10.1  20.8         6   1.8e+04       8      73 ..     234     316 ..     223     318 .. 0.65
   3 ?   -5.3  14.3         6   1.8e+04      16      74 ..     306     374 ..     293     378 .. 0.60

  Alignments for each domain:
  == domain 1  score: 67.7 bits;  conditional E-value: 3.1e-22
      zf-CHY   1 CkHykravvairapcCkklyaCreCHeeledhelerlevkevlcllCeteqekavlCkkCkkefaeyfCpiCkll 75 
                 CkHy r+ ++ +++ Ck++++Cr CH+e +dh+l+r +++++lc++C + q++a +Ck C+k++a+y+C++Ckl+
  EPX73842.1 145 CKHYMRN-CKKQCADCKQWFPCRLCHNEASDHTLNRNATENMLCMFCLKSQPAAANCKYCRKSMARYYCNKCKLW 218
                 *******.****************************************************************985 PP

  == domain 2  score: -10.1 bits;  conditional E-value: 6
      zf-CHY   8 vvairapcCkklyaCreCH.....eeledhelerlevkevlcllCeteqekavl......Ckk.....Ckk..efaeyfCpiCk 73 
                 +++i     +++y+C++C      +   +h++ + +++ + c  C +   ++++      C++     C      ++y Cp+C+
  EPX73842.1 234 ICRIGRGVGDDYYHCKTCGiclpiAVYDTHRCIERSTD-CNCPICGEYMFNSTErvvflpCSHplhqrCYGdyIKTNYRCPTCS 316
                 67777788899*******99998755667877666655.6799998765333322333446555555553344356778**997 PP

  == domain 3  score: -5.3 bits;  conditional E-value: 6
      zf-CHY  16 CkklyaCreCH....eeledhelerlevkevlcllCeteqekavlCkkCkk.efaey.....fCpiCkl 74 
                  k+ y C +C     +  +  ++  +ev++       ++  +++ C+ C++ + ++y     +C+ C++
  EPX73842.1 306 IKTNYRCPTCSktiiNVNSMFRILDMEVERQPMPYPYNTWISTIHCNDCSSrSDTNYhflghKCKSCHS 374
                 567899999994443212233444455555444444555577888999977434455677767999986 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -7.5  13.6         6   1.8e+04      27      43 ..     150     168 ..     131     191 .. 0.49
   2 ?   -4.9  11.6         6   1.8e+04       3      44 .]     187     236 ..     182     236 .. 0.58
   3 ?    1.9   2.0     0.099     3e+02       2      21 ..     250     272 ..     249     273 .. 0.52
   4 !   32.4   7.2   2.9e-11   8.6e-08       2      43 ..     273     315 ..     272     316 .. 0.91
   5 ?   -2.1   4.5       1.8   5.3e+03       3      32 ..     351     381 ..     349     387 .. 0.63

  Alignments for each domain:
  == domain 1  score: -7.5 bits;  conditional E-value: 6
   zf-RING_2  27 reClerwlrssst...CPlC 43 
                 r+C ++ ++ +++   C lC
  EPX73842.1 150 RNCKKQ-CADCKQwfpCRLC 168
                 444333.2222223334443 PP

  == domain 2  score: -4.9 bits;  conditional E-value: 6
   zf-RING_2   3 CpICleelssadsvlll.pCgH...v.fhreClerw....lrssst...CPlCr 44 
                 C+ Cl   +s+  +  +  C++     ++ +C + w     +ss +   C +Cr
  EPX73842.1 187 CMFCL---KSQPAAANCkYCRKsmaRyYCNKC-KLWdddpSKSSYHcddCGICR 236
                 89998...333333322148866664489999.445444333333366799998 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.099
   zf-RING_2   2 eCpICl..eelssadsvlll.pC 21 
                 +C+ICl    +++++++ +  +C
  EPX73842.1 250 TCGICLpiAVYDTHRCIERStDC 272
                 8****843333444444333367 PP

  == domain 4  score: 32.4 bits;  conditional E-value: 2.9e-11
   zf-RING_2   2 eCpIC.leelssadsvlllpCgHvfhreClerwlrssstCPlC 43 
                 +CpIC    ++s+++v+ lpC+H  h+ C  ++++++ +CP+C
  EPX73842.1 273 NCPICgEYMFNSTERVVFLPCSHPLHQRCYGDYIKTNYRCPTC 315
                 7****55666999****************************** PP

  == domain 5  score: -2.1 bits;  conditional E-value: 1.8
   zf-RING_2   3 CpICleelssadsvlllpCgHv.fhreCler 32 
                 C  C ++ +++++ l  +C+ +    +C++ 
  EPX73842.1 351 CNDCSSRSDTNYHFLGHKCKSChSYNTCISS 381
                 6667777777777775567543233778876 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?  -11.0  14.9         6   1.8e+04      20      42 ..     145     168 ..     135     192 .. 0.58
   2 ?  -15.5  20.7         6   1.8e+04      23      44 .]     185     205 ..     164     237 .. 0.78
   3 ?   -5.1   6.1         6   1.8e+04      28      42 ..     232     251 ..     227     255 .. 0.43
   4 ?    3.0   2.1     0.034     1e+02      26      43 ..     263     278 ..     263     279 .. 0.89
   5 !   21.2   8.8   6.9e-08   0.00021       1      44 []     273     317 ..     271     317 .. 0.96
   6 ?   -3.4   6.7       3.3     1e+04       1      20 [.     350     369 ..     350     381 .. 0.69

  Alignments for each domain:
  == domain 1  score: -11.0 bits;  conditional E-value: 6
   zf-RING_5  20 CgHif..CekClkkllekeavCpiC 42 
                 C+H++  C+k +  ++ + + C +C
  EPX73842.1 145 CKHYMrnCKKQCADCK-QWFPCRLC 168
                 6666422443333333.34444444 PP

  == domain 2  score: -15.5 bits;  conditional E-value: 6
   zf-RING_5  23 ifCekClkkllekeavCpiCrk 44 
                 ++C  Clk +  + a+C  Crk
  EPX73842.1 185 MLCMFCLKSQP-AAANCKYCRK 205
                 56777777777.7777777765 PP

  == domain 3  score: -5.1 bits;  conditional E-value: 6
   zf-RING_5  28 Clkkll.....ekeavCpiC 42 
                 C   +        ++ C +C
  EPX73842.1 232 CGICRIgrgvgDDYYHCKTC 251
                 43333333344333333333 PP

  == domain 4  score: 3.0 bits;  conditional E-value: 0.034
   zf-RING_5  26 ekClkkllekeavCpiCr 43 
                 ++C+ +++  + +CpiC+
  EPX73842.1 263 HRCIERST--DCNCPICG 278
                 58999999..99*****7 PP

  == domain 5  score: 21.2 bits;  conditional E-value: 6.9e-08
   zf-RING_5   1 hCnkCfekl.skeekfyltsCgHifCekClkkllekeavCpiCrk 44 
                 +C++C e + +++e++++++C+H ++++C   + + +++Cp+C+k
  EPX73842.1 273 NCPICGEYMfNSTERVVFLPCSHPLHQRCYGDYIKTNYRCPTCSK 317
                 599****999*********************************86 PP

  == domain 6  score: -3.4 bits;  conditional E-value: 3.3
   zf-RING_5   1 hCnkCfeklskeekfyltsC 20 
                 hCn C+++   +  f   +C
  EPX73842.1 350 HCNDCSSRSDTNYHFLGHKC 369
                 89999998855555555555 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -7.2   6.3         6   1.8e+04      23      26 ..     156     159 ..     141     175 .. 0.61
   2 ?   -5.8   5.5         6   1.8e+04      17      25 ..     199     205 ..     185     218 .. 0.43
   3 ?   -3.2   1.0       2.6   7.8e+03      22      27 ..     228     233 ..     226     237 .. 0.69
   4 ?   -4.3   8.5       5.8   1.7e+04      25      40 .]     264     277 ..     246     277 .. 0.85
   5 !   20.2   5.9   1.3e-07   0.00039       1      40 []     273     315 ..     273     315 .. 0.81
   6 ?   -1.2   0.1      0.61   1.8e+03      22      30 ..     350     358 ..     349     362 .. 0.83

  Alignments for each domain:
  == domain 1  score: -7.2 bits;  conditional E-value: 6
  zf-C3HC4_2  23 CqkC 26 
                 C++C
  EPX73842.1 156 CADC 159
                 3344 PP

  == domain 2  score: -5.8 bits;  conditional E-value: 6
  zf-C3HC4_2  17 pCgHvfCqk 25 
                 +C+  +C+k
  EPX73842.1 199 NCK--YCRK 205
                 332..2322 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 2.6
  zf-C3HC4_2  22 fCqkCi 27 
                 +C +C 
  EPX73842.1 228 HCDDCG 233
                 677775 PP

  == domain 4  score: -4.3 bits;  conditional E-value: 5.8
  zf-C3HC4_2  25 kCilrsLeekneCPlC 40 
                  Ci rs     +CP+C
  EPX73842.1 264 RCIERS--TDCNCPIC 277
                 689886..4559**99 PP

  == domain 5  score: 20.2 bits;  conditional E-value: 1.3e-07
  zf-C3HC4_2   1 kCpiCldmlkdps.vvt..pCgHvfCqkCilrsLeekneCPlC 40 
                 +CpiC + + + + +v   pC H  +q C   +++ + +CP+C
  EPX73842.1 273 NCPICGEYMFNSTeRVVflPCSHPLHQRCYGDYIKTNYRCPTC 315
                 5****98655543133357****************999***** PP

  == domain 6  score: -1.2 bits;  conditional E-value: 0.61
  zf-C3HC4_2  22 fCqkCilrs 30 
                 +C++C  rs
  EPX73842.1 350 HCNDCSSRS 358
                 8****9886 PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.2      0.33     1e+03       1       5 [.     231     235 ..     231     240 .. 0.95
   2 ?   -0.6   0.6      0.38   1.1e+03       2       6 ..     251     255 ..     250     259 .. 0.94
   3 !   17.3   1.8   9.8e-07    0.0029       1      28 [.     273     301 ..     273     302 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.33
  zf-RING_11   1 eCsIC 5  
                 +C IC
  EPX73842.1 231 DCGIC 235
                 8**** PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.38
  zf-RING_11   2 CsICL 6  
                 C ICL
  EPX73842.1 251 CGICL 255
                 ****9 PP

  == domain 3  score: 17.3 bits;  conditional E-value: 9.8e-07
  zf-RING_11   1 eCsICLeefkpgq.alfilpCsHtFHfkC 28 
                 +C IC e + ++  ++++lpCsH  H+ C
  EPX73842.1 273 NCPICGEYMFNSTeRVVFLPCSHPLHQRC 301
                 7******9997662779***********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (424 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1940  (0.108205); expected 358.6 (0.02)
Passed bias filter:                      590  (0.0329076); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.62u 0.25s 00:00:00.87 Elapsed: 00:00:00.47
# Mc/sec: 2710.11
//
Query:       EPX73843.1  [L=587]
Description: CMGC/CDK/CRK7 protein kinase Lsk1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.9e-76  254.9   0.0    9.8e-76  254.6   0.0    1.1  1  Pkinase         Protein kinase domain
    1.8e-33  115.9   0.0    2.5e-33  115.4   0.0    1.2  1  Pkinase_Tyr     Protein tyrosine kinase
    1.8e-06   27.5   0.1    4.7e-06   26.1   0.1    1.6  1  Kinase-like     Kinase-like
     0.0036   16.3   0.0      0.052   12.5   0.1    2.3  2  Haspin_kinase   Haspin like kinase domain
  ------ inclusion threshold ------
      0.056   12.2   0.0        0.1   11.3   0.0    1.3  1  Pkinase_fungal  Fungal protein kinase
      0.077   12.3   0.5       0.19   11.1   0.5    1.6  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
       0.09   12.7   0.3       0.87    9.5   0.2    2.1  2  APH             Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  254.6   0.0   3.8e-79   9.8e-76       1     264 []     270     555 ..     270     555 .. 0.97

  Alignments for each domain:
  == domain 1  score: 254.6 bits;  conditional E-value: 3.8e-79
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHH CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseee 99 
                 yek+ ++GeG++GkVyka+++ tg+ vA+K+i+ e++k+    +++rE+kil++l+h+niv+l+e++ ek+++ +v+ey++++    ll+ + ++++ +
  EPX73843.1 270 YEKVDQIGEGTYGKVYKAINNVTGELVALKRIRLEQEKDGFPITTVREVKILQRLRHKNIVKLLEILVEKNSVNMVFEYMDHDLTGVLLNSQLHFTPGN 368
                 7899*****************************************************************************9977778889999***** PP

                 HHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS...BCTTTSCGGGS-HHHH.TTSCBSHHHHHHHHHHHHHHHHHSS CS
     Pkinase 100 akkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk...ltsfvgtseYlAPEvl.keneyskkvDvWslGvilyelltgk 194
                 +k++ +q+le+l+ylH+ g+iHrD+K +NiL++++g+lK +DFGla+  +  +    +t++v+t ++++PE+l +e++y+ +vD+Ws+G+i++el+ gk
  EPX73843.1 369 VKHLSQQLLEALRYLHHLGVIHRDIKGSNILLNNNGDLKFADFGLARFKTYPKAgatYTNRVITLWFRPPELLlGETKYDGAVDIWSVGCIVMELFIGK 467
                 ***********************************************9999888899****************9************************* PP

                 -STTTSSHHHHHHHHHHTHHHHHHHCT.SHH...HHHTTS........................-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 195 ppfsgekgkekvekeldqlekilkilg.etkeklpeasei........................seeakdllkkllkkdpkkRltaeellqhpyl 264
                 p+f+   gk+    e++qle i++++g +++e++pe +++                         + a+dl++kll+ +p++R++a+++l h+y+
  EPX73843.1 468 PLFQ---GKD----EIHQLEIIYDLMGtPNEETWPEVKSLpwydllkpphekpsrfvdsfreklTPAAIDLCQKLLSLNPTHRPSARDALMHEYF 555
                 ****...666....8999999*****988999**************************************************************8 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.4   0.0   9.9e-37   2.5e-33       4     220 ..     273     484 ..     270     508 .. 0.87

  Alignments for each domain:
  == domain 1  score: 115.4 bits;  conditional E-value: 9.9e-37
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHH.HHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTS CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkeeateee.keelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekekl 100
                   +++GeG++GkV+++  +     + + Va+K ++ e++++      ++e+ki+++l+h+nivkll + ++++++ +v+ey+++ dL   L ++ + ++
   EPX73843.1 273 VDQIGEGTYGKVYKAINN----VTGELVALKRIRLEQEKDGfPITTVREVKILQRLRHKNIVKLLEILVEKNSVNMVFEYMDH-DLTGVLLNS-QLHF 364
                  579************999....88999******87666665478999**********************************99.899999998.9*** PP

                  BHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHH.HSEEEHHHHHHHHHHHHHH CS
  Pkinase_Tyr 101 tlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslk.ekkftsksDvWsfGvllwE 197
                  t  ++ ++++q+ ++++yL++  ++Hrd+   N+Ll++n   k +DfGLar  +  +   + +++ + + + +pE l  e+k+  + D+Ws G +++E
   EPX73843.1 365 TPGNVKHLSQQLLEALRYLHHLGVIHRDIKGSNILLNNNGDLKFADFGLARFKTYPKAGATYTNRVITLWFRPPELLLgETKYDGAVDIWSVGCIVME 462
                  ***************************************************997777777778888888888***8762667**************** PP

                  HHTTSSGTTTTSHHHHHHHHHHT CS
  Pkinase_Tyr 198 iftlgespypglkneevleklke 220
                  +f  g+  ++g ++ + le + +
   EPX73843.1 463 LFI-GKPLFQGKDEIHQLEIIYD 484
                  **9.8887777766666665555 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.1   1.8e-09   4.7e-06     105     240 ..     327     460 ..     309     467 .. 0.66

  Alignments for each domain:
  == domain 1  score: 26.1 bits;  conditional E-value: 1.8e-09
  Kinase-like 105 esiywvvnall.llpaasvdl......eilnkvl.qkrset.hkkletiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvr 193
                  ++i     +l+ l+ + sv++      + l  vl +++  +   + ++++++ll  ++     +L+++g++h +++  n+ll+++g l+  +f+ L r
   EPX73843.1 327 KNIV---KLLEiLVEKNSVNMvfeymdHDLTGVLlNSQLHFtPGNVKHLSQQLL--EA---LRYLHHLGVIHRDIKGSNILLNNNGDLKFADFG-LAR 415
                  3443...34441456677888888777555554404444553445555555555..44...569****************************97.677 PP

  Kinase-like 194 agtkvvl.seve.....kgfaPpEllgsrggytrknktkmthkldaWqlGlvi 240
                   +t+ ++ ++         f PpEll          +tk+  ++d W +G  +
   EPX73843.1 416 FKTYPKAgATYTnrvitLWFRPPELLLG--------ETKYDGAVDIWSVGCIV 460
                  77666653332244545789****9977........46777789999998766 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   0.1     2e-05     0.052     225     267 ..     385     428 ..     260     447 .. 0.65
   2 ?   -3.4   0.0       1.3   3.4e+03     273     296 ..     469     494 ..     466     496 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 2e-05
  Haspin_kinase 225 kfeFEHRdLhldniLvdknlnvtlidlklsRle.ssegkvlytr 267
                    ++   HRd++  niL+++n+   + d+ l+R++ +++  + yt+
     EPX73843.1 385 HLGVIHRDIKGSNILLNNNGDLKFADFGLARFKtYPKAGATYTN 428
                    46667****************************87777666664 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 1.3
  Haspin_kinase 273 lFqGggD.yqfe.iYrlMrsllsksw 296
                    lFqG+++  q e iY lM + ++++w
     EPX73843.1 469 LFQGKDEiHQLEiIYDLMGTPNEETW 494
                    899999945888459***99988888 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0     4e-05       0.1     316     343 ..     377     403 ..     371     444 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 4e-05
  Pkinase_fungal 316 IkghrsLflkagiLHrDiSenNilitds 343
                     ++++r L+ + g++HrDi   Nil++++
      EPX73843.1 377 LEALRYLH-HLGVIHRDIKGSNILLNNN 403
                     67999***.****************954 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.5   7.4e-05      0.19      59     166 ..     315     411 ..     308     424 .. 0.66

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 7.4e-05
         Kdo  59 vrEfrllkrLeeagvavpkpvaagavkvgleyrAlllterlegaqdLedllakwae.laeelkrallkavgrliaklhragvnHadlyaknillqqeee 156
                 vrE+++l+rL+++ +  +  +  + + v+      ++ e +++  dL+ +l + +  +     ++l +++  + + lh +gv H+d+   nill++++ 
  EPX73843.1 315 VREVKILQRLRHKNIVKLLEILVEKNSVN------MVFEYMDH--DLTGVLLNSQLhFTPGNVKHLSQQLLEALRYLHHLGVIHRDIKGSNILLNNNG- 404
                 56666666666665544444444444333......45566654..66665554333555555567788899999*********************998. PP

         Kdo 157 eeaeiwliDl 166
                     + + D+
  EPX73843.1 405 ---DLKFADF 411
                 ...4445555 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.17   4.4e+02       3      58 ..     274     336 ..     272     356 .. 0.74
   2 ?    9.5   0.2   0.00034      0.87     150     197 ..     374     415 ..     357     418 .. 0.71

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.17
                 EEE--.SSCEEEEEEETT.--EE.EEEE-TTS-HHHHH....HHHHHHHHHHHTT-.B--B-C CS
         APH   3 relsggasnrtylvttpa.gryv.lrrnpparaaeeir....revallrlLakagv.pvPevl 58 
                  +++ g++ ++y+      g++v l+r++ ++++  ++    rev++l+ L+  ++ +  e+l
  EPX73843.1 274 DQIGEGTYGKVYKAINNVtGELVaLKRIRLEQEKDGFPittvREVKILQRLRHKNIvKLLEIL 336
                 578999999999999999886666999998855555545555*********988775555555 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00034
                 HHHHHHHHHH--SSS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-E CS
         APH 150 eqvlaalaallpgelptvllHgDlhpgNllvdpddgrvtGviDfedag 197
                 +q+l+al+ l     + +++H+D++  N+l++ +++    + Df++a+
  EPX73843.1 374 QQLLEALRYL----HHLGVIHRDIKGSNILLNNNGDL--KFADFGLAR 415
                 4444444444....459***************44333..488888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (587 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       487  (0.0271627); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.62u 0.33s 00:00:00.95 Elapsed: 00:00:00.49
# Mc/sec: 3637.63
//
Query:       EPX73844.1  [L=334]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.6e-06   26.3   2.0    1.3e-05   25.1   2.0    1.6  1  WW        WW domain


Domain annotation for each model (and alignments):
>> WW  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   2.0   7.5e-10   1.3e-05       7      31 .]     195     219 ..     194     219 .. 0.96

  Alignments for each domain:
  == domain 1  score: 25.1 bits;  conditional E-value: 7.5e-10
                 EEE-TTTT-EEEEETTT--EESS-- CS
          WW   7 eqwdpdsGrvYYyNheTgetqWekP 31 
                 ++wd + + +Y+++ +T++t+We P
  EPX73844.1 195 AIWDNNAQAYYFWDRRTNTTSWENP 219
                 68*********************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (334 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1964  (0.109543); expected 358.6 (0.02)
Passed bias filter:                      683  (0.0380947); expected 358.6 (0.02)
Passed Vit filter:                        67  (0.00373696); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.47
# Mc/sec: 2148.97
//
Query:       EPX73845.1  [L=643]
Description: queuine tRNA-ribosyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.8e-55  188.5   0.0    2.7e-55  188.0   0.0    1.2  1  TGT          Queuine tRNA-ribosyltransferase
    1.4e-06   27.4   1.3      2e-06   27.0   1.3    1.1  1  Phosducin    Phosducin
    0.00029   20.8   0.0    0.00071   19.5   0.0    1.6  1  Thioredoxin  Thioredoxin


Domain annotation for each model (and alignments):
>> TGT  Queuine tRNA-ribosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.0   0.0   4.4e-59   2.7e-55       2     345 ..      11     367 ..       7     372 .. 0.83

  Alignments for each domain:
  == domain 1  score: 188.0 bits;  conditional E-value: 4.4e-59
                 TEEEEEEEETTEEEEESEEEEBETTSSBTTB-HHHHH.HTTES-.EEEEHHHHHHTTTHHHHHHTTHHHHHHT-..-S-EEEE-S.HHHHHHHEEEESS CS
         TGT   2 gaRlGklelphgtietPafmpvgtqgtvkgltpdelkeelgaqi.ilsntyhlelrpgeelvakagglhkflgw..dkpiltdsg.gfqvfslkkitee 96 
                 +aR+++++l+ ++++tP+f+  +++gt+++ltpd+++++ ++ i  ++ +  l l +++ +++ +g++ k+++   +++il  +  +  ++s+ +   +
  EPX73845.1  11 SARISSVSLKSKVLQTPCFIFPTSKGTIPHLTPDNINDN-EVPIvYFGLEDSLDLLEKSPIFTVDGEIDKWVAGtpSQSILIAPRrSIPLPSV-SAGPQ 107
                 59**********************************744.544413334446677788888999******99842223466544415556666.56899 PP

                 EEEEE-TTTS-EEEE-HHHHHHHHHHHT-SEEE-------SS--HHHHHHHHHHHHHHHHHHHHHH.......SE.EEEEE--TT-HHHHHHHHHHHHH CS
         TGT  97 gvsfqsridGskvlltpeesieiqeklgsDiimalddvvpspaskkrveksverTlrwldrcleah.......qa.lfgivqGglyedlreesaeelak 187
                  +++ ++  G  ++lt+e ++++++kl+++i++al d +++    kr  k++er+++w+++ l +        +  +f +v   ++++  +  +e+ ++
  EPX73845.1 108 NIEILTSS-GL-RKLTNEVYVKAITKLRPEIAIALNDNPSNVPGVKRKPKMTERSITWTNELLSSLqnnelteKVkVFFPVPN-VETSYLTPLIERFRE 203
                 9******6.99.*************************99999999******************77777888996669999965.99999********** PP

                 H--SEEEE-SSSSSSHHHHHHHHHHHHGGGS-TTS-EEETTB-SHHHHHHHHHTT--EEEESHHHHHHHTTEEEE.......TTE........EEETTS CS
         TGT 188 rdfdgyaigGlsvgeekeellevveavtellpedkprylmGvgtPedlleavalGvDmfdcvyptrtarngralt.......seg........elnlkn 271
                  d++  +i Gl+ + + + + +     ++ +p+    +l    tP  +l+++++G+D++   +++++++ g a+t       + +         ++++n
  EPX73845.1 204 SDYK-QHITGLACYGDLQSIPSD----LSIYPK---LFLRPLLTPLAILQSIHQGADIIMADLVNQASDSGIAFTftfpapvE-NllnrklelAWDMWN 293
                 **87.59***8866644444444....444433...2688889********************************76665550.14445555589**** PP

                 GGGTT--SBSSSS--SHHHHH-BHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHH CS
         TGT 272 akyaedfspldegCsCytCknytraylhhllktkemlgaiLltiHNlhyylelfkriReaIkegtfeefveefa 345
                 +++a+d+spl++gCsC tC++y+ray+hhll+++e++g+i+++ HN+h+++++f+ iR++Ik+g+f    e f 
  EPX73845.1 294 NRFATDLSPLQPGCSCNTCQSYSRAYVHHLLQARELVGWIMVQQHNIHVFHNFFAGIRDSIKAGNFLRDTEIFE 367
                 ******************************************************************98887665 PP

>> Phosducin  Phosducin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.0   1.3   3.3e-10     2e-06      25     236 ..     396     609 ..     388     643 .] 0.73

  Alignments for each domain:
  == domain 1  score: 27.0 bits;  conditional E-value: 3.3e-10
                 HHHHHHHHHHHH.HH-----.---------------.........--.--------------S-HHHHH..HH.TT----HHHHHHHHHHHHHHHHHHH CS
   Phosducin  25 pkgvindwrkfkqlesedre.evarekkrllkklssscrshldeeee.srddkdlkekisrkmslkeye..li.dkdkddeeflrkyrkqrmdemrqkl 118
                 pk     w ++k  e++d e + + +kk+ ++ +     s l e +    +  d    +s   s+ e e  l+ + d  d+   r+ r q ++e  +++
  EPX73845.1 396 PKENKPSWVQLK-SETNDAEtSHTTKKKESIQGFQE---SELPEMDTtVSNFADNYAALSDNQSVSELEedLFaELDDIDDTAYRESRLQSLKEEFERV 490
                 666667799999.67777662456677888888888...555554440445678889999999999876333313444466777888888888877777 PP

                 -----..--SEEE--SHHHHHHHHHSS-TT-EEEEEEE-TTSTTHHHHHHHHHHHHHH-TTSEEEEEEHHHH-.-TTSS-TTT-SEEEEEETTEEEEEE CS
   Phosducin 119 skgpr..fkfvlelesgeqfldtidkeqkitlivvhiyedgvkgtealnssliclaaeyptvkfckvkasvig.asdrfsrdvlpallvykagellsnf 214
                 s   +  + + l +es  + +d       +  +v+h +    + ++ ++s l  ++ ++   kf ++ a++    + ++  +vlp +l y   +l+s +
  EPX73845.1 491 SIAKEkgHMQYLTVESEREVMD---ITTTSKRVVIHFFHPDFRRCKIMDSHLEKISKNHWETKFIRIEAANAPfLALKLGLKVLPVILCYVDAKLVSKL 586
                 6655411556667777666555...556677899***********************************998725789********************* PP

                 TTGGGGS-TT.--HHHHHHHHHT CS
   Phosducin 215 vrvtdqlaed.ffavdleaflqe 236
                 +  td   +d f +  le +l +
  EPX73845.1 587 IGFTDLGNNDdFDTPVLEFWLLK 609
                 ****9766551545555655554 PP

>> Thioredoxin  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   1.2e-07   0.00071      14      90 ..     513     588 ..     502     595 .. 0.91

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 1.2e-07
                  HTTTSSEEEEEEE-TTSHHHHCHHHHHHHHHHHCTTTSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTEEEEEEES CS
  Thioredoxin  14 vakekklvlveFyApwCghCkalaPeleklaeelkdkvklakvdvdenedlakkyevegiPtlklfkngkevkkyeg 90 
                  +  ++k v++ F+ p    Ck + ++lek+++++  + k++++++ + + la k++ + +P ++ + + k v+k+ g
   EPX73845.1 513 ITTTSKRVVIHFFHPDFRRCKIMDSHLEKISKNHW-ETKFIRIEAANAPFLALKLGLKVLPVILCYVDAKLVSKLIG 588
                  555799***************************99.9*******************************999998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (643 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       787  (0.0438954); expected 358.6 (0.02)
Passed bias filter:                      530  (0.029561); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.27s 00:00:00.89 Elapsed: 00:00:00.43
# Mc/sec: 4515.60
//
Query:       EPX73846.1  [L=380]
Description: exopolyphosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.5e-26   91.2   0.6    1.2e-25   90.4   0.6    1.4  1  DHHA2     DHHA2 domain
    9.7e-12   45.0   0.0      2e-11   44.0   0.0    1.5  1  DHH       DHH family
  ------ inclusion threshold ------
      0.054   14.3   0.0        1.3    9.9   0.0    2.5  2  GARS_N    Phosphoribosylglycinamide synthetase, N domain


Domain annotation for each model (and alignments):
>> DHHA2  DHHA2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.4   0.6     2e-29   1.2e-25       3     142 ..     239     378 ..     238     379 .. 0.91

  Alignments for each domain:
  == domain 1  score: 90.4 bits;  conditional E-value: 2e-29
                 HHHHHT-STTS-HHHHTTTTEEEEE.ETTEEEEEEEEEES-HHHHHT.THHHHHHHHHHHH.HHT-SEEEEEEE.....ETTTEEEEEE....STTHHH CS
       DHHA2   3 lkkaksdlsglsledllrrDyKeftgeggvkvgiasvpvslsewleekrkgellaalekfaeerkldllvlmttfeeegdirrelllaal.daaeklae 100
                 lk++k   +g+s+ dll+rD K++   g+v++   s+++ ++ w+eekr++ + ++l++fae++++dl+++ ++ ++++++rr+++l+ + +++e++a+
  EPX73846.1 239 LKEKKGTYKGFSFMDLLHRDLKQYA-PGNVSISYPSIGKGID-WIEEKRSN-WQQELKDFAEKKQVDLVIVGLSLSKKEEFRRQMILYKRtKQGESFAD 334
                 6788999******************.****************.****8866.*********7777*********99************97766666888 PP

                 HHT---BT.EEET................T---HHHHTHHHHHH CS
       DHHA2 101 alekasee.leLeewkeg.aewrrvykqgnvkasRKqvaPllre 142
                 ++ +++++ l+Le  k+   + + v++q+n  asRK+v+P++++
  EPX73846.1 335 KFLEKNKNsLGLEFLKNVeDNTINVFNQRNSAASRKKVVPMIMD 378
                 888887855****99998999********************985 PP

>> DHH  DHH family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.0   0.0   3.3e-15     2e-11       3      95 ..      36     189 ..      34     198 .. 0.76

  Alignments for each domain:
  == domain 1  score: 44.0 bits;  conditional E-value: 3.3e-15
                 EEE-ECSSSHHHHHHHHHHHHC............................................................ECS--TCGGCGCCHHCC CS
                 xxxxxxxxxxxxxxxxxxxxxx............................................................xxxxxxxxxxxxxxxxx RF
         DHH   3 livghknpDtDsigSaialanl............................................................lvDhneksqavegeake 41 
                 ++ g ++ D+Ds + +i++a++                                                            lvDhn+ +++++g  k+
  EPX73846.1  36 FVSGNESADLDSCATSIVYAYFlqhkhrercvvpffniprnelrlrpelvclldmlkirtdnvlflndiaaaperlssspihLVDHNTLDREEVG--KF 132
                 6899*****************5566666666666666666666666666667777777777777777777777777777777*************..99 PP

                 CSEEEEEEE-S---SS---SS--EEEE-SSS-HHHHHHHHHHH.....TT----HHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxx RF
         DHH  42 eaedviiiDHHrlgeefetlapilflnepvgstaeivaellee.....kkeeiskeiae 95 
                 ++    iiDHH+ + ++ + +p ++  +++gs++++v +++ +      ++e ++ +ae
  EPX73846.1 133 KKTVEGIIDHHKDEGNYLNANPRIV--KECGSCSTLVIQYYMDilstlYNTEATRMEAE 189
                 99999********988888888777..69***********9997777733333444443 PP

>> GARS_N  Phosphoribosylglycinamide synthetase, N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0     0.088   5.3e+02      15      38 ..      21      49 ..      18     150 .. 0.76
   2 ?    9.9   0.0   0.00021       1.3      31      58 ..     263     307 ..     257     312 .. 0.78

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.088
                HHHHHTTSTTESEEEEEE--CGG.....T CS
      GARS_N 15 lawklaqspkvekvyvapgNagt.....e 38
                +a  ++ s +++k+ ++ gN++      +
  EPX73846.1 21 IASDISASLQTKKLTFVSGNESAdldscA 49
                67788899999999999999988443320 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00021
                 EE--CGG.................TTHHHHHHHHHHCTESEEEE- CS
      GARS_N  31 apgNagt.................edlealvefakeekidlvvvG 58 
                 apgN ++                 +  ++l +fa+++++dlv+vG
  EPX73846.1 263 APGNVSIsypsigkgidwieekrsNWQQELKDFAEKKQVDLVIVG 307
                 78888887877777777776655322357***************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (380 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       713  (0.039768); expected 358.6 (0.02)
Passed bias filter:                      506  (0.0282224); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 2604.71
//
Query:       EPX73847.1  [L=946]
Description: GARP complex subunit Vps54 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.7e-30  104.3   1.1    6.7e-30  104.3   1.1    2.6  2  Vps54         Vps54-like protein
  ------ inclusion threshold ------
      0.037   13.6   4.3       0.13   11.9   4.3    1.9  1  HEPPP_synt_1  Heptaprenyl diphosphate synthase (HEPPP synthas
       0.11   11.3   0.7       0.19   10.5   0.7    1.4  1  TraG_N        TraG-like protein, N-terminal region
        0.2   11.9   0.1        0.8   10.0   0.0    2.0  2  CCG           Cysteine-rich domain


Domain annotation for each model (and alignments):
>> Vps54  Vps54-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.2       2.9   1.3e+04      87     112 ..      78     102 ..      75     112 .. 0.53
   2 !  104.3   1.1   1.5e-33   6.7e-30       2     134 .]     701     829 ..     700     829 .. 0.96

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 2.9
       Vps54  87 pyvkealerhleeksqesllaefdkv 112
                 py++++++++++ ++q+++ +   +v
  EPX73847.1  78 PYLHQIFQEYARYSKQKQT-SFHRHV 102
                 7888888888633333322.223333 PP

  == domain 2  score: 104.3 bits;  conditional E-value: 1.5e-33
       Vps54   2 ekfvvvesallllkmieeYlelakelpslaseilsrllelLklfNsrtcqliLgAgAtrsagLktItakhLalasqslslvialipyvkealerhleek 100
                 ++ ++v++++ ll+++++Y +l+ ++p l+++++  +++lL+++Nsr++qliLgAg +rs+gL ++  kh+alasq+++l+ +l +++ ++l++h    
  EPX73847.1 701 QSIHMVSASVRLLECLDQYGQLVFNFPRLSHDFYYGIIDLLRTLNSRVYQLILGAGTVRSSGLSRVLGKHIALASQTVTLLQTLSTSMFKFLSKH---- 795
                 7889*******************************************************************************************.... PP

       Vps54 101 sqesllaefdkvkrdyqehqneihaKLvsImedr 134
                    ++++e+ ++++d++ h+n+i++K++++m++r
  EPX73847.1 796 YGIKQTQELLSLENDFNLHHNQITEKFIALMRER 829
                 5566668999*********************998 PP

>> HEPPP_synt_1  Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   4.3   2.9e-05      0.13      95     198 ..     534     635 ..     522     648 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 2.9e-05
  HEPPP_synt_1  95 lirllaeaikeinehkiklYekkeetveellesvkkiesaLlaklaehfqletwkelieeflllkrLekekeayeegkksvliealkkeafqkaktf 191
                   li +l++   e + + i+l +  ++++e +l+++++i+s+ ++  ++   +et+k ++ + l+++ Le+ +   +++  s++++ l+k  ++++   
    EPX73847.1 534 LIDILSRKDEEQYHYSIALNDLMTASAEVILQKLTHINSVYFNASTKTSVQETLKLFTLHSLFYNELENLCGITQNNFMSIIMQELQKWFQNDQL-- 628
                   7889999999999************************************************************************9987666555.. PP

  HEPPP_synt_1 192 eslkkeq 198
                    ++++ +
    EPX73847.1 629 RNIQRLA 635
                   4444433 PP

>> TraG_N  TraG-like protein, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.7   4.3e-05      0.19     188     285 ..     506     607 ..     363     638 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 4.3e-05
      TraG_N 188 spdlydslrsplrtvartyptCkeawsgLrarlanqvnpglkarl.aaalkllgknanata....fkdalsaasqyltgvsssa....saediirqall 277
                  +d+yd+l+         y+tC e+  +L ++l   ++  + ++  ++ +++  ++  +ta    + ++l+ ++++++++s+ +    +++ + +++l+
  EPX73847.1 506 IADYYDTLT-------TVYLTCLEVLRRLGQQLKLLIDILSRKDEeQYHYSIALND-LMTAsaevILQKLTHINSVYFNASTKTsvqeTLKLFTLHSLF 596
                 579999999.......36*********99999998888655544404444444443.333346789999999888888888886233344455567777 PP

      TraG_N 278 inalkdg...s 285
                 +n l++    +
  EPX73847.1 597 YNELENLcgiT 607
                 77777765431 PP

>> CCG  Cysteine-rich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       2.2   9.9e+03      60      81 ..     272     293 ..     269     294 .. 0.82
   2 ?   10.0   0.0   0.00018       0.8      26      67 ..     819     860 ..     807     873 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 2.2
         CCG  60 rnvetaeetgadaivtacpgCl 81 
                 +++  a++++ +ai+ + ++C+
  EPX73847.1 272 HRITKARDEQREAIFKQEQSCS 293
                 5677888999999999999996 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00018
         CCG  26 ealgveleelekesCCGagggrsgkeelaealakrnvetaee 67 
                 +++++ l++ + + CCG+ +++++ +e+  +++k  ++++ +
  EPX73847.1 819 TEKFIALMRERSNFCCGQIITVAWDNEEPHDYMKDLIKNLSK 860
                 56788999999****************999999999999877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (946 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       958  (0.053433); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.73u 0.31s 00:00:01.04 Elapsed: 00:00:00.46
# Mc/sec: 6173.14
//
Query:       EPX73848.1  [L=86]
Description: hypothetical protein SOCG_03067 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
      0.047   12.3   1.9      0.043   12.4   1.4    1.2  1  RBP_receptor  Retinol binding protein receptor


Domain annotation for each model (and alignments):
>> RBP_receptor  Retinol binding protein receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   1.4   2.4e-06     0.043     376     402 ..      44      70 ..      31      78 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 2.4e-06
                   HTTSHHHHHHHHHHHHHHHHHHHHHHH CS
  RBP_receptor 376 wmsysgyqiAfillGlliqqvvfflcl 402
                     + sg q+A +++G +++  vffl++
    EPX73848.1  44 GSGLSGSQVAKTCIGAVVIYTVFFLFC 70 
                   5678*********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       487  (0.0271627); expected 358.6 (0.02)
Passed bias filter:                      247  (0.0137766); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.41
# Mc/sec: 631.56
//
Query:       EPX73849.1  [L=558]
Description: 5-aminolevulinate synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.9e-71  241.2   0.0    2.5e-71  240.8   0.0    1.1  1  Aminotran_1_2    Aminotransferase class I and II
    5.7e-05   22.2   0.0    0.00016   20.8   0.0    1.7  2  Aminotran_5      Aminotransferase class-V
    0.00093   17.8   0.0     0.0016   17.1   0.0    1.2  1  Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
     0.0025   18.3   0.2     0.0091   16.5   0.1    2.1  3  Preseq_ALAS      5-aminolevulinate synthase presequence


Domain annotation for each model (and alignments):
>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  240.8   0.0   5.6e-75   2.5e-71       5     356 ..     177     512 ..     173     518 .. 0.95

  Alignments for each domain:
  == domain 1  score: 240.8 bits;  conditional E-value: 5.6e-75
                    ESSSSSTTSTTSSHHHHHHHHHHHH..HHHHHTSTTST-BTTHHHHHHHHHHHHHCTCTTCHTTGGEGEEEESHHHHHHHHHHHHHHHTTT-EEEE CS
  Aminotran_1_2   5 nLgsneylgdsgkptlpevakaeke..galaggtlneygpidglpeleealakflgrseklklkreaavvvgsGagaliealifllklnpgdeilv 98 
                     ++sn+yl ++g+  + +++++ ++  g +aggt+n+ g+++++ +le  +a+++        k++ a+v+gs++ a++++l +l ++ p +++l+
     EPX73849.1 177 VWCSNDYLNMGGHKKVSDAMHRCIDkyGGGAGGTRNIAGHNQHAMQLERSIADLHL-------KPS-ALVFGSCYVANDATLSTLGRKLPNCVFLS 264
                    79******************************************************.......666.***************************** PP

                    EESS-THHHHHHHHTTSEEEEEEBEETTTTEE-HHHHHHHHTTHHCTTETEEEEEEESS-TTT--B--HHHHHHHHHHHHHTTEEEEEEETTTTCB CS
  Aminotran_1_2  99 pdptyasyknilrlsggevvryplyseedfhldlealeealkeapegnkktkvilvesphNPtGtvatleeleklldlakkynlllfvDeaYagfv 194
                    ++ ++as+++++r+s++  + ++       h++l +le++l+++p +++  kvi++es+++++G va+  e+++l   akky++l+f+De++a+++
     EPX73849.1 265 DEMNHASMIHGIRNSRCDKIIFK-------HNNLADLEAKLASLPLNRP--KVIAFESIYSMSGNVAPISEICDL---AKKYGALTFLDEVHAVGM 348
                    ***********************.......*****************99..************************...****************** PP

                    SSSS..HTHHHHGGSTTSTTEEEEEESSSTTSSGGG-EEEEEEEHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Aminotran_1_2 195 fgsl..davatranveeepnllivgslsKafGlaGeRvGyilgnaavvsqlrklsrpflsssllqaavaaalsdallkqseleemrqrlqkrrkel 288
                    +g+   ++++  +++ ++++ +i+g+l+K++G++G   Gyi+g++++v+ +r+l+ +f+++++l++ v+  + +a ++ +  + +r++  +  +++
     EPX73849.1 349 YGPRggGVAEETPGLLDKVD-IITGTLAKSYGCVG---GYIAGSSRLVDMIRSLAPGFIFTTSLPPHVMVGALTAIEHLKTSNVEREQQRSAVRRV 440
                    **665433333666666666.**************...*******************************9999999999999999*********** PP

                    HHHHHHSTEEEECCSCSSEEEEEETHHCHHHHHHHHHHTCTEEEEEGGGGTS...TTEEEEEC.TTS-HHHH CS
  Aminotran_1_2 289 rdeLaelglkvlasqsgmflltdlsaetakelskkLleevgvyvtpgtsftv...pgrlRitv.Aglteeel 356
                    +++L e+g++vl++++++++ ++++ae ak +s++Ll+e+++yv+ ++ +tv   ++rlRit+ +++++e++
     EPX73849.1 441 KQSLSEIGIPVLSNDTHIVPAMVGDAELAKLASDSLLNEHNIYVQSINFPTVnagTERLRITPtPAHNTEKY 512
                    ***************************************************************988888764 PP

>> Aminotran_5  Aminotransferase class-V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.0   3.5e-08   0.00016     117     181 ..     282     347 ..     218     350 .. 0.85
   2 ?   -2.2   0.0      0.34   1.5e+03     258     336 ..     413     485 ..     407     486 .. 0.63

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 3.5e-08
                  EEEEBETTSCBEGGGHHHH--.TTEEEEEEESBETTTTEB--HHHHHHHHHHTT-EEEEE-TTTTT CS
  Aminotran_5 117 kvipldeegeldldeleklln.ektklvaithvsnvtGtiqpveeigklakkkgalvlvDaaqavg 181
                  ++i ++++ + dl++  + l  +++k++a+  + +++G++ p+ ei++lakk+gal+++D + avg
   EPX73849.1 282 DKIIFKHNNLADLEAKLASLPlNRPKVIAFESIYSMSGNVAPISEICDLAKKYGALTFLDEVHAVG 347
                  555566666777666666665599**************************************9987 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.34
                  HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCTSTTEEEES.-B-CTCBSEEEEEETTCSHHHHH..HHHHHTTEEEE CS
  Aminotran_5 258 iiglgaaleyleeigleaiekhekelaeyllerlkslpgvrlygpdkaerrasivsfnfkgvhaedva..tlLdeegIavr 336
                  ++g  +a+e+l+  ++e  +++++++  ++++ l++++   l       ++++iv   + + + +++a  +lL+e++I v+
   EPX73849.1 413 MVGALTAIEHLKTSNVE--REQQRSAVRRVKQSLSEIGIPVL------SNDTHIVPAMVGDAELAKLAsdSLLNEHNIYVQ 485
                  56666677777666666..44445556667777777776666......467777777777777766652257777787776 PP

>> Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   3.5e-07    0.0016      51     180 ..     217     348 ..     214     350 .. 0.80

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 3.5e-07
                      -HHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHTTS-TTEEEEEESTSSHHHHHHHHHTHHH.TTCEEEEESTTSHH.HHHHHCCTTEEEEE CS
  Cys_Met_Meta_PP  51 nptrsvleeriaaLeggeaalavssGmaAiaaailallkaGdeivvsddlYggtqrllkkvlkk.lgievkfvdtsdle.elekaikentklvy 142
                      n     le++ia+L+   +al++ s   A +a++ +l ++  + v  +d  + ++ +     ++  +i +k+ + +dle +l++   ++ k++ 
       EPX73849.1 217 NQHAMQLERSIADLHLKPSALVFGSCYVANDATLSTLGRKLPNCVFLSDEMNHASMIHGIRNSRcDKIIFKHNNLADLEaKLASLPLNRPKVIA 310
                      556678*******************************9998887777776666555544444443456667777666551344444569***** PP

                      EESS-TTTT----HHHHHHHHHHTT-EEEEEGTTTHTT CS
  Cys_Met_Meta_PP 143 lEtptnpllkvvDiekiaklakkagvlvvvDntfaspl 180
                      +E++ +   +v+ i +i++lakk g+l+++D + a ++
       EPX73849.1 311 FESIYSMSGNVAPISEICDLAKKYGALTFLDEVHAVGM 348
                      *******************************9887665 PP

>> Preseq_ALAS  5-aminolevulinate synthase presequence
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.1     2e-06    0.0091       5      40 ..      10      50 ..       6     109 .. 0.67
   2 ?   -3.0   0.0       2.2     1e+04      86      97 ..     259     270 ..     247     273 .. 0.80
   3 ?   -3.9   0.0         4   1.8e+04      41      55 ..     421     435 ..     403     451 .. 0.56

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 2e-06
  Preseq_ALAS  5 rrCPFlsrvpqaflqka.rksLlsyAqkCPvmmela....a 40
                 +rCPF+s+  + +l++  +  L++   +CP+m  +      
   EPX73849.1 10 KRCPFVSKTDASTLRRMmGAGLVRAGAHCPIMGGALpagdG 50
                 7******99999998862669**********9533244442 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 2.2
  Preseq_ALAS  86 kCPFlaaemsqk 97 
                  +C Fl  em++ 
   EPX73849.1 259 NCVFLSDEMNHA 270
                  699999999965 PP

  == domain 3  score: -3.9 bits;  conditional E-value: 4
  Preseq_ALAS  41 ralstsaaalqkake 55 
                    l ts ++ +++++
   EPX73849.1 421 EHLKTSNVEREQQRS 435
                  445555554444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (558 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       433  (0.0241508); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.29s 00:00:00.85 Elapsed: 00:00:00.45
# Mc/sec: 3765.26
//
Query:       EPX73850.1  [L=470]
Description: membrane transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.8e-24   85.0  24.8    8.1e-24   84.2  24.8    1.4  1  MFS_1        Major Facilitator Superfamily
  ------ inclusion threshold ------
      0.031   14.3   7.2        3.3    7.8   0.7    3.9  3  Herpes_UL73  UL73 viral envelope glycoprotein


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.2  24.8     9e-28   8.1e-24       4     353 .]      60     429 ..      51     429 .. 0.80

  Alignments for each domain:
  == domain 1  score: 84.2 bits;  conditional E-value: 9e-28
       MFS_1   4 aaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsd.......rfGrrrvlllglllfalg.lllll.f.asslwlllvlr 92 
                   ++ ++++si++p+   ++ + lg s+   gl+++l +++a+v+ +p+  ls+        f  +r +l++ ++ +lg +l+ l f a s+ l+lv+r
  EPX73850.1  60 NNLVLSISFSIVIPTSD-TYVKVLGGSEVLSGLIIGLPMITALVTLYPMLLLSNpksangfTF-YKRPYLCSCVTAILGhILYSLaFkAKSIALILVSR 156
                 45667777888888888.78888*******************************999988767.9**************77766655347777****** PP

       MFS_1  93 vlqGlgagalfpagaaliad..wfpkeergraigllsagfslGailgpllggllasslg..............Wravfyilaivsllafvlfllllpee 175
                 ++ G++ ++++     +++d  ++ ++ r+++  l  ++  +G+++gp lggl+a + +              W ++f+      + +++l  +++++ 
  EPX73850.1 157 IILGIA-CVMYLYHKKFMSDriLVGPKYRTFMSTLNIIMQTAGIAIGPFLGGLMAKASShshnaiwnqytsgnWLLSFF-----WAALLILSSIFYYDA 249
                 ******.58888888888884456779****************************77778*****88854444444444.....444444455667666 PP

       MFS_1 176 pperkrkspkeeekgtgpaplvpawkallkdpvlw....illialllfffgfsg..lltllplylqevlglsglllaglllallalvgailallagrls 268
                 + + ++++p+++    +p+  ++  +  +++p l     i++ + + f+++f++  + + +p+y++  +g+s  +++g +lal++l+ +++ ll+++ls
  EPX73850.1 250 DCDIPPVPPRTD----APHTNSE-TQTAHRRPNLAstikIVVSGYIAFSCFFTMeaYQASIPIYTNYLYGYS-PFQSGNFLALACLIDIPFLLLFSFLS 342
                 666666666666....5555555.55555555553344434444444443444466****************.8************************* PP

       MFS_1 269 drlgrrrrlllallllllaalglallavtssavllll.vlvliGf.glgfvfpsllalasdlappeeagtasglfntagslggalgp 353
                 + +  r+++l+++++++++++  ++++ +++  l l+  l+++ f g +++f++l +l+++ + p+++  as ++++  +++  +gp
  EPX73850.1 343 RWIEDRKITLIGIIITVVSVAVHLIVNKIHKEYLQLYfTLFTLVFfGTSIAFSPLVSLLTKQLHPDHHLLASVVIQISIAAADTVGP 429
                 *****************************88777777555555555****************************9999888877776 PP

>> Herpes_UL73  UL73 viral envelope glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0    0.0089        80      40      60 ..      51      71 ..      20      73 .. 0.77
   2 ?    7.8   0.7   0.00037       3.3      33      69 ..     139     172 ..     114     177 .. 0.88
   3 ?    3.7   1.1    0.0068        61      15      61 ..     314     366 ..     289     373 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.0089
  Herpes_UL73 40 SFssiwallnvlvvivalliy 60
                 + s+ ++l+n lv+ +++ i+
   EPX73850.1 51 AISAALMLMNNLVLSISFSIV 71
                 568999***********9987 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.00037
  Herpes_UL73  33 tyslslsSFssiwallnvlvvivalliylrylCfkkF 69 
                   ysl++++ s  ++l+  +++ +a+++yl++    kF
   EPX73850.1 139 LYSLAFKAKSIALILVSRIILGIACVMYLYHK---KF 172
                  5999**************************94...44 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.0068
  Herpes_UL73  15 gstieatndFYsvsCsadtyslslsSFssiw......allnvlvvivalliyl 61 
                  g+++ + ++F   +C  d   l l SF s w      +l+++++ +v++++ l
   EPX73850.1 314 GYSPFQSGNFLALACLIDIPFLLLFSFLSRWiedrkiTLIGIIITVVSVAVHL 366
                  67788899999********************5555555888888888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (470 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       940  (0.052429); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.29s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 3317.67
//
Query:       EPX73851.1  [L=563]
Description: alpha-glucoside transporter Sut1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-13   50.2  12.2    1.5e-13   50.2  12.2    2.3  2  MFS_2       MFS/sugar transport protein
    0.00039   19.4   2.5    0.00039   19.4   2.5    1.8  2  MFS_1_like  MFS_1 like family
    0.00095   17.5   2.2     0.0018   16.6   2.2    1.4  1  BT1         BT1 family
     0.0047   16.9   2.9     0.0047   16.9   2.9    2.6  3  Reticulon   Reticulon
  ------ inclusion threshold ------
        9.3    6.3  17.8      0.035   14.2   2.6    3.4  3  BioY        BioY family


Domain annotation for each model (and alignments):
>> MFS_2  MFS/sugar transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.2  12.2   4.1e-17   1.5e-13       7     255 ..      49     302 ..      44     309 .. 0.74
   2 ?   -4.5   3.3       1.6   5.6e+03     292     340 ..     438     484 ..     433     522 .. 0.75

  Alignments for each domain:
  == domain 1  score: 50.2 bits;  conditional E-value: 4.1e-17
       MFS_2   7 laanilsvllatylliFytdvlglsaalvglvllvarlvDaitDpivGtlidktstrwGrrrPwlllsaiilavsiillftppelsqs.........ak 96 
                 l++++++++   y ++++ +  gl+  + +++ ++  l+ +i+ pi+G+l+d+ + r+GrrrP++l + ++ ++s++l+ ++p ls+           +
  EPX73851.1  49 LGVQLTWSVELGYGSPYLFSL-GLRKEYTSIIWIAGPLTGIIIQPISGILSDRFQSRLGRRRPFMLSASLLGTFSLFLMGWAPYLSNLffegtvakrVT 146
                 677888888778888888876.***********************************************************999988899999*99999 PP

       MFS_2  97 fiwllvtyillrilytlfeipyvslvpvltkdydeRtsltsvr...s.flsvlggvlaailafllvlilgglkserkgylifaliialLmllgviivvl 191
                 + +++++  ll+i+++++  +  sl++    ++++  +++s+      + +v+g +l+ +  ++++++l    ++ +++ ++a+i+ l++++ +  +v 
  EPX73851.1 147 IGLATLSIYLLDIAVNVVMASTRSLIVDS-VNSEQQHDANSWAgrmIgIGNVFGYLLGFLPLYQIFAFLHI--TQLQAFCTMASIFLLMTVG-ITSLVV 241
                 9999999999***************9765.55555555666541113134555555555556788888888..6677777777777555555.544445 PP

       MFS_2 192 gtkervemrkkekteqkeklslleqlkevfrnra..flillllfllaalalgvlnglllYyltyvl 255
                 + ++     +k++  + e +++++ +++  ++ +  ++++  +   +++a++ ++  +l+y+t ++
  EPX73851.1 242 TERSFPT-SEKDQSIASEIFEFFGTMRQNISSLPesLRKICYV---QFFAYFGWFP-FLFYITTYV 302
                 5554444.46888889999999999998887754113333333...3333445554.445555554 PP

  == domain 2  score: -4.5 bits;  conditional E-value: 1.6
       MFS_2 292 yllgalltivllvlvlllqpsnlllflvllviagfgvgvaallpwsmla 340
                 +l++ ll    ++ +++l  +  + + v+++i g++ + +  +p+s+++
  EPX73851.1 438 WLVSHLLFGTCMLSTFFL--GTSWEAQVMVAICGLSWACSLWIPYSLFS 484
                 666777777777777777..55555666666777777777777777665 PP

>> MFS_1_like  MFS_1 like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   2.5   1.1e-07   0.00039      21     184 ..      61     224 ..      56     343 .. 0.60
   2 ?   -2.6   0.2      0.53   1.9e+03     180     201 ..     462     483 ..     416     527 .. 0.59

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 1.1e-07
  MFS_1_like  21 YltiylkskglkaseigiitlilpltsilsppiwgvlaDrfgkrkk.....vvilslllsavlflsllfippskerqeesklevsvaqdvdaektfwil 114
                 Y + yl s gl  +   ii  + plt i+ +pi g l+Drf+ r       + + ++ll + +++ +   p        + +++ ++++v ++ t+ + 
  EPX73851.1  61 YGSPYLFSLGLRKEYTSIIWIAGPLTGIIIQPISGILSDRFQSRLGrrrpfM-LSASLLGTFSLFLMGWAP--------YLSNLFFEGTVAKRVTIGLA 150
                 6688*************************************99988666642.333333333222233344........44444444444444444443 PP

  MFS_1_like 115 fllvvlasfflaailvlldaatlkel.....gedrkdyGrqrlfGsv.GyaifafitGilidhysvnllpysally 184
                  l + l ++  + +++ + +++   +      + +   Gr +  G v Gy +    +  ++ ++++++l+  a+  
  EPX73851.1 151 TLSIYLLDIAVNVVMASTRSLIVDSVnseqqHDANSWAGRMIGIGNVfGYLLGFLPLYQIFAFLHITQLQ--AFCT 224
                 3333333333333333333333333321110333333456666665545555555555555555555544..2223 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.53
  MFS_1_like 180 sallyvlaallvisllvvliln 201
                 +++++++ + + +sl+++++l 
  EPX73851.1 462 QVMVAICGLSWACSLWIPYSLF 483
                 3344444444444544444444 PP

>> BT1  BT1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   2.2   5.2e-07    0.0018      37     143 ..      87     202 ..      73     235 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 5.2e-07
         BT1  37 gwvikpltallsDgfallGytkrwYlvvscllgaafallygllpakeasa...kva.aafillsslgkaivdvlsdalvselarq.....spkagpsLv 126
                 g +i+p+ ++lsD f     ++r++++ + llg ++  l+g  p  +      +va  + i l++l+  ++d++++ +++          + ++  +  
  EPX73851.1  87 GIIIQPISGILSDRFQSRLGRRRPFMLSASLLGTFSLFLMGWAPYLSNLFfegTVAkRVTIGLATLSIYLLDIAVNVVMASTRSLivdsvNSEQQHDAN 185
                 789**************************************8775433221113331356778888888888877655543211112235666777889 PP

         BT1 127 SwiwlvsavGgiiasvl 143
                 Sw+  ++ +G + + +l
  EPX73851.1 186 SWAGRMIGIGNVFGYLL 202
                 99999999999988655 PP

>> Reticulon  Reticulon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.3       1.2   4.3e+03      40      77 ..     116     153 ..     111     173 .. 0.55
   2 !   16.9   2.9   1.3e-06    0.0047      15     123 ..     199     306 ..     196     308 .. 0.89
   3 ?   -2.8   0.6       1.5   5.3e+03      97     101 ..     453     457 ..     432     489 .. 0.51

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1.2
   Reticulon  40 klllllllvlflwaeyagllnkskppepelelseesvr 77 
                  ll ++ l+l+ wa y + l  +++  +++++   ++ 
  EPX73851.1 116 SLLGTFSLFLMGWAPYLSNLFFEGTVAKRVTIGLATLS 153
                 55555666666666666666665555555555444444 PP

  == domain 2  score: 16.9 bits;  conditional E-value: 1.3e-06
   Reticulon  15 ivlgglllllllfellgysllslvsklllllllvlflwaeyagllnks.kppepelelseesvreladsllellnkalselrrlalgedlklflkvall 112
                 ++l+g+l l+ +f +l+++ l++++ ++ ++ll+++       + ++s +++e++ ++  e ++ ++ ++++++ ++ + lr++++++ +  f  + +l
  EPX73851.1 199 GYLLGFLPLYQIFAFLHITQLQAFCTMASIFLLMTVG-ITSLVVTERSfPTSEKDQSIASEIFE-FFGTMRQNISSLPESLRKICYVQFFAYFGWFPFL 295
                 678888889999999999*****************99.44466677776889999999999988.9*********************999999999999 PP

   Reticulon 113 lyilsilgslf 123
                 +yi +++g lf
  EPX73851.1 296 FYITTYVGTLF 306
                 9*******987 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 1.5
   Reticulon  97 lalge 101
                  +lg 
  EPX73851.1 453 FFLGT 457
                 22222 PP

>> BioY  BioY family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.6      0.11   3.9e+02      79     123 ..     112     162 ..      39     175 .. 0.62
   2 ?   14.2   2.6   9.8e-06     0.035      50     101 ..     191     242 ..     184     308 .. 0.76
   3 ?   -0.2   1.2      0.26   9.3e+02      76     101 ..     450     476 ..     427     525 .. 0.50

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.11
        BioY  79 lllallagllviyalGvlwlalv....lslaaalaagv..lpfipgdlvka 123
                 +l a l+g++ ++++G++ ++       ++a+ +++g+  l + + d++  
  EPX73851.1 112 MLSASLLGTFSLFLMGWAPYLSNlffeGTVAKRVTIGLatLSIYLLDIAVN 162
                 366777788888888886555532333223333333330033333333333 PP

  == domain 2  score: 14.2 bits;  conditional E-value: 9.8e-06
        BioY  50 avllgptgGYllGFlvaalvvgllkk.laelllallagllviyalGvlwlalv 101
                  + +g  +GYllGFl+   +  +l + +   +++ +a +++++++G++ l+++
  EPX73851.1 191 MIGIGNVFGYLLGFLPLYQIFAFL-HiTQLQAFCTMASIFLLMTVGITSLVVT 242
                 5557889*****************.32333345555689999999**999984 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.26
        BioY  76 laelllall.agllviyalGvlwlalv 101
                 l +++l     + +++ ++G+ w + +
  EPX73851.1 450 LSTFFLGTSwEAQVMVAICGLSWACSL 476
                 222222222135666777777777663 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (563 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       560  (0.0312343); expected 358.6 (0.02)
Passed bias filter:                      291  (0.0162307); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 3843.02
//
Query:       EPX73852.1  [L=914]
Description: karyopherin Kap104 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.6e-29  101.3   2.6    3.9e-14   52.8   0.0   10.5 11  HEAT_EZ          HEAT-like repeat
    1.5e-23   80.8  10.0    0.00093   19.3   0.0   10.5 10  HEAT             HEAT repeat
    6.5e-15   55.3   0.2    0.00013   22.3   0.0    6.7  7  HEAT_2           HEAT repeats
    4.9e-09   36.4   0.0     0.0022   18.0   0.0    4.7  5  Cnd1             non-SMC mitotic condensation complex subunit
    1.4e-08   34.4   3.2      0.066   13.3   0.0    6.1  6  Arm              Armadillo/beta-catenin-like repeat
    3.1e-06   27.7   0.1       0.28   11.8   0.1    5.0  6  Vac14_Fab1_bd    Vacuolar 14 Fab1-binding region
    2.9e-05   23.9   0.5     0.0012   18.8   0.0    3.2  2  IBN_N            Importin-beta N-terminal domain
    8.3e-05   22.5   1.0        5.4    6.9   0.0    5.7  8  DUF3385          Domain of unknown function (DUF3385)
    0.00016   20.4   0.8      0.042   12.4   0.1    3.5  4  Adaptin_N        Adaptin N terminal region
    0.00022   21.3   0.7     0.0058   16.8   0.0    3.1  3  RTP1_C1          Required for nuclear transport of RNA pol II
     0.0014   18.6   0.8       0.01   15.8   0.2    2.9  2  UNC45-central    Myosin-binding striated muscle assembly cent
     0.0034   16.6   0.0      0.037   13.2   0.0    2.7  2  Cnd3             Nuclear condensing complex subunits, C-term 
       0.01   15.5   0.0        6.5    6.2   0.0    4.1  4  CLASP_N          CLASP N terminal
  ------ inclusion threshold ------
      0.097   12.2   0.2        2.7    7.4   0.0    3.0  3  Tti2             Tti2 family
       0.11   11.6   0.2          2    7.4   0.0    3.1  4  MMS19_C          RNAPII transcription regulator C-terminal
       0.32   11.3   0.0       0.32   11.3   0.0    3.5  3  Importin_rep_4   Importin repeat
       0.41   10.7   2.8       0.64   10.1   2.8    1.2  1  YL1              YL1 nuclear protein
        3.1    8.2   7.9        5.8    7.4   7.9    1.4  1  PBP1_TM          Transmembrane domain of transglycosylase PBP


Domain annotation for each model (and alignments):
>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.1      0.38   3.8e+02      24      53 ..      14      39 ..       7      40 .. 0.64
   2 ?   -2.3   0.0       6.9   6.9e+03      34      47 ..      99     112 ..      97     117 .. 0.84
   3 ?    5.7   0.0     0.022        22      27      55 .]     130     159 ..     130     159 .. 0.88
   4 ?    5.7   0.0     0.022        22      28      54 ..     179     205 ..     172     206 .. 0.90
   5 ?    4.3   0.0     0.058        58      36      52 ..     228     244 ..     219     267 .. 0.81
   6 ?   -0.8   0.0       2.3   2.3e+03      22      37 ..     298     313 ..     285     320 .. 0.71
   7 ?   -1.0   0.0       2.8   2.8e+03       1      32 [.     394     422 ..     394     431 .. 0.49
   8 !   52.8   0.0   3.9e-17   3.9e-14       1      54 [.     432     485 ..     432     486 .. 0.98
   9 ?    5.9   0.0     0.019        19       2      34 ..     520     552 ..     498     557 .. 0.81
  10 ?    1.1   0.0      0.61   6.1e+02       2      31 ..     708     737 ..     707     744 .. 0.84
  11 !    9.5   0.0    0.0014       1.4       5      55 .]     754     806 ..     754     806 .. 0.94

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.38
     HEAT_EZ 24 plvpeilpaLlalLnddsd.eVRaaAagaLg 53
                ++++e+++  l     ++d  +RaaA+  L+
  EPX73852.1 14 LQLSEVIKNSL-----SEDsQTRAAALNLLE 39
                34455555555.....777466*****9997 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 6.9
     HEAT_EZ  34 lalLnddsdeVRaa 47 
                 +++L+d+++++R+ 
  EPX73852.1  99 VRGLCDSQPLIRGI 112
                 67899999999986 PP

  == domain 3  score: 5.7 bits;  conditional E-value: 0.022
     HEAT_EZ  27 peilpaLlalLnddsdeV.RaaAagaLgnl 55 
                 pe+lp+L+ +L+ + +++ ++ A  aL+++
  EPX73852.1 130 PEVLPQLMDMLSGSTPSTtQEGAFSALTKI 159
                 89*********88888555********986 PP

  == domain 4  score: 5.7 bits;  conditional E-value: 0.022
     HEAT_EZ  28 eilpaLlalLnddsdeVRaaAagaLgn 54 
                  ++p ++ l +++++++R+ A+ +L +
  EPX73852.1 179 FMIPRFIELARNENPKIRTDALFCLNQ 205
                 579*********************976 PP

  == domain 5  score: 4.3 bits;  conditional E-value: 0.058
     HEAT_EZ  36 lLnddsdeVRaaAagaL 52 
                 l +d s++VR++++ aL
  EPX73852.1 228 LATDTSPNVRKNVCQAL 244
                 66788888888888887 PP

  == domain 6  score: -0.8 bits;  conditional E-value: 2.3
     HEAT_EZ  22 lqplvpeilpaLlalL 37 
                 l p++++i+p Ll+++
  EPX73852.1 298 LGPYLDKIVPMLLRGM 313
                 7789999999999765 PP

  == domain 7  score: -1.0 bits;  conditional E-value: 2.8
     HEAT_EZ   1 wrvRraAawaLGrlaggepellqplvpeilpa 32 
                 w++R   a+aL +l    +   q+l+++ilp 
  EPX73852.1 394 WNLRKCSAAALDALS---ASWSQKLLEVILPH 422
                 778855555554221...22234444455555 PP

  == domain 8  score: 52.8 bits;  conditional E-value: 3.9e-17
     HEAT_EZ   1 wrvRraAawaLGrlaggepellqplvpeilpaLlalLnddsdeVRaaAagaLgn 54 
                 w +++a+++aLG++a+g+++ + +++pe+ p+Ll+lL + +++VR+ ++++Lg+
  EPX73852.1 432 WKIQEAGVLALGAIAEGCMDGMIQYLPELYPYLLSLLDSNKPLVRTITCWTLGR 485
                 999**************************************************8 PP

  == domain 9  score: 5.9 bits;  conditional E-value: 0.019
     HEAT_EZ   2 rvRraAawaLGrlaggepellqplvpeilpaLl 34 
                  v++a+++a++ l+++++ +l p+++ il  ++
  EPX73852.1 520 KVQEAGCSAFAILEEQAGHTLVPFLEPILTNFA 552
                 488999999987888888888888887777665 PP

  == domain 10  score: 1.1 bits;  conditional E-value: 0.61
     HEAT_EZ   2 rvRraAawaLGrlaggepellqplvpeilp 31 
                 +vR +A++ LG ++  ++++++p+ +++l 
  EPX73852.1 708 EVRQSAYALLGDMCMFCFDQIRPYCDALLL 737
                 79*********9998899999999988875 PP

  == domain 11  score: 9.5 bits;  conditional E-value: 0.0014
     HEAT_EZ   5 raAawaLGrlaggepellqplvpeilpaLlalLnddsd..eVRaaAagaLgnl 55 
                 ++A+w  G++a + + ++qp v+ +l  L+   ++ ++  +V +++a+++g+l
  EPX73852.1 754 NNAIWSAGEMALQLGKDMQPWVKPLLERLICIIQSGKAnsTVLENVAITIGRL 806
                 589********************************8888788*********97 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.91   9.1e+02       5      24 ..      19      38 ..      16      40 .. 0.82
   2 ?   -0.0   0.0       1.5   1.5e+03       5      27 ..      98     120 ..      96     123 .. 0.75
   3 ?    2.6   0.0      0.22   2.2e+02       1      29 [.     132     161 ..     132     163 .. 0.88
   4 !   10.3   0.0   0.00073      0.73       2      28 ..     181     207 ..     180     209 .. 0.93
   5 !   14.6   0.0     3e-05      0.03       2      28 ..     222     248 ..     221     251 .. 0.87
   6 ?   -0.0   0.1       1.5   1.5e+03      13      28 ..     393     408 ..     392     410 .. 0.88
   7 !   19.3   0.0   9.3e-07   0.00093       1      31 []     419     449 ..     419     449 .. 0.98
   8 !   12.5   0.0   0.00014      0.14       1      29 [.     460     488 ..     460     490 .. 0.92
   9 ?    3.1   0.0      0.15   1.5e+02       1      25 [.     506     530 ..     506     535 .. 0.89
  10 !   10.6   0.0   0.00057      0.57       9      29 ..     701     722 ..     694     724 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.91
                HHHHHT-SSHHHHHHHHHHH CS
        HEAT  5 llkllsDpspeVReaAakaL 24
                ++k+  +++++ R+aA++ L
  EPX73852.1 19 VIKNSLSEDSQTRAAALNLL 38
                677777999*******9887 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 1.5
                 HHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAakaLgal 27 
                 +++ l+D+ p +R  + + +++l
  EPX73852.1  98 VVRGLCDSQPLIRGISGNVITTL 120
                 6789********97666666555 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.22
                 HHHHHHHHHT-SSHHH.HHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeV.ReaAakaLgalae 29 
                 +lP l+ +ls + p+   e A+ aL++++e
  EPX73852.1 132 VLPQLMDMLSGSTPSTtQEGAFSALTKICE 161
                 6999*****99999955***********98 PP

  == domain 4  score: 10.3 bits;  conditional E-value: 0.00073
                 HHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgala 28 
                 +P +++l + ++p++R  A+ +L +++
  EPX73852.1 181 IPRFIELARNENPKIRTDALFCLNQFL 207
                 89*********************9985 PP

  == domain 5  score: 14.6 bits;  conditional E-value: 3e-05
                 HHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgala 28 
                 l ++ +l +D+sp+VR+++++aL+ l+
  EPX73852.1 222 LETCYSLATDTSPNVRKNVCQALVYLL 248
                 77888999***************9876 PP

  == domain 6  score: -0.0 bits;  conditional E-value: 1.5
                 SHHHHHHHHHHHHHHH CS
        HEAT  13 speVReaAakaLgala 28 
                 +++ R+ +a aL al+
  EPX73852.1 393 DWNLRKCSAAALDALS 408
                 7999********9986 PP

  == domain 7  score: 19.3 bits;  conditional E-value: 9.3e-07
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHHCS CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalaevl 31 
                 +lP+l   l+++++++ ea ++aLga+ae++
  EPX73852.1 419 ILPHLKDSLMSSDWKIQEAGVLALGAIAEGC 449
                 89***************************98 PP

  == domain 8  score: 12.5 bits;  conditional E-value: 0.00014
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalae 29 
                 l P ll+ll ++ p VR  ++++Lg+ ++
  EPX73852.1 460 LYPYLLSLLDSNKPLVRTITCWTLGRYSS 488
                 78***********************9765 PP

  == domain 9  score: 3.1 bits;  conditional E-value: 0.15
                 HHHHHHHHHT-SSHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLg 25 
                 l+  ll++  D++ +V ea + a++
  EPX73852.1 506 LIEKLLRMVVDNNKKVQEAGCSAFA 530
                 67789****************9997 PP

  == domain 10  score: 10.6 bits;  conditional E-value: 0.00057
                 H.T-SSHHHHHHHHHHHHHHHH CS
        HEAT   9 l.sDpspeVReaAakaLgalae 29 
                 + +D+ +eVR++A   Lg+++ 
  EPX73852.1 701 CaKDEVAEVRQSAYALLGDMCM 722
                 449*****************95 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0      0.34   3.4e+02      11      67 ..      25      51 ..      10      71 .. 0.61
   2 ?    0.4   0.0      0.86   8.5e+02      30      63 ..     130     164 ..     113     168 .. 0.75
   3 !   22.3   0.0   1.3e-07   0.00013       2      58 ..     182     247 ..     181     284 .. 0.80
   4 !   16.5   0.0   8.5e-06    0.0084      18      87 ..     401     483 ..     392     484 .. 0.70
   5 !    9.9   0.0   0.00094      0.93       2      71 ..     462     548 ..     461     550 .. 0.70
   6 ?    0.4   0.0      0.89   8.9e+02      40      57 ..     701     719 ..     673     729 .. 0.68
   7 ?   -2.2   0.0       5.7   5.7e+03      43      59 ..     791     807 ..     755     819 .. 0.51

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.34
      HEAT_2 11 dpdpevrraairaLgrignpealpaLvellededpavRraaaeaLgaigd.pealpaL 67
                +                               ed+ +R+aa + L + +d p++ + L
  EPX73852.1 25 S-------------------------------EDSQTRAAALNLLEKTKDiPDVNNYL 51
                4...............................45555555555555555444444444 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.86
      HEAT_2  30 pealpaLvelleded.pavRraaaeaLgaigdpea 63 
                 pe+lp L ++l+ +  + +++ a  aL +i +++a
  EPX73852.1 130 PEVLPQLMDMLSGSTpSTTQEGAFSALTKICEDSA 164
                 68889999988554415788888899988876655 PP

  == domain 3  score: 22.3 bits;  conditional E-value: 1.3e-07
      HEAT_2   2 daLlqalendpdpevrraairaLg...rignpea.......lpaLvellededpavRraaaeaLgai 58 
                 + +++++ + ++p++r  a+ +L     i+++++       l+++ +l++d++p+vR+++++aL+ +
  EPX73852.1 182 PRFIELA-RNENPKIRTDALFCLNqflLIQSQSLyahidtfLETCYSLATDTSPNVRKNVCQALVYL 247
                 6678877.99**************77745666444455556***********************855 PP

  == domain 4  score: 16.5 bits;  conditional E-value: 8.5e-06
      HEAT_2  18 raairaLg....rignpealpaLvellededpavRraaaeaLgaig..........dpealpaLkellddddddvvReaAaeaL 87 
                 +aa++aL     ++  + +lp L + l ++d+ +++a + aLgai+          +pe +p L+ lld  ++++vR+ + ++L
  EPX73852.1 401 AAALDALSaswsQKLLEVILPHLKDSLMSSDWKIQEAGVLALGAIAegcmdgmiqyLPELYPYLLSLLD-SNKPLVRTITCWTL 483
                 467777774433233334567777777779***************544555566557********9885.68999999877766 PP

  == domain 5  score: 9.9 bits;  conditional E-value: 0.00094
      HEAT_2   2 daLlqalendpdpevrraairaLgrignp......ea.........lpaLvellededpavRraaaeaLgaigd...pealpaLkell 71 
                 ++Ll++l ++  p vr  ++++Lgr+ +       e+         ++ L++++ d +  v++a + a + + +   +  +p+L+ +l
  EPX73852.1 462 PYLLSLL-DSNKPLVRTITCWTLGRYSSWatcldsEVdrqkyfiplIEKLLRMVVDNNKKVQEAGCSAFAILEEqagHTLVPFLEPIL 548
                 6799999.999999**********7777644444411444556555888888889999999999999888886522244666666655 PP

  == domain 6  score: 0.4 bits;  conditional E-value: 0.89
      HEAT_2  40 l.ededpavRraaaeaLga 57 
                 + +de ++vR+ a   Lg 
  EPX73852.1 701 CaKDEVAEVRQSAYALLGD 719
                 3377777777777777665 PP

  == domain 7  score: -2.2 bits;  conditional E-value: 5.7
      HEAT_2  43 edpavRraaaeaLgaig 59 
                 +++ v +++a ++g++g
  EPX73852.1 791 ANSTVLENVAITIGRLG 807
                 33444455555555544 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.028        28      19      89 ..      91     163 ..      79     171 .. 0.82
   2 !   18.0   0.0   2.2e-06    0.0022      29     113 ..     187     275 ..     175     298 .. 0.81
   3 ?   -0.0   0.0       0.8     8e+02       9      76 ..     406     477 ..     398     497 .. 0.61
   4 !    6.8   0.0    0.0066       6.6      59     116 ..     506     563 ..     440     600 .. 0.71
   5 ?   -1.8   0.0       2.8   2.8e+03      28      45 ..     700     717 ..     693     727 .. 0.69

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.028
        Cnd1  19 veylvepLrkrLkDedpyVRktaaivvakLilnd.mvkekgflselaklleDenpr.Vvanalaalteiseks 89 
                 ++y+ + + ++L D++p +R     v++ Li++  +  + ++l +l ++l+ + p+  ++ a +alt+i e s
  EPX73852.1  91 LDYTKSTVVRGLCDSQPLIRGISGNVITTLISRWgVSTWPEVLPQLMDMLSGSTPStTQEGAFSALTKICEDS 163
                 79999999**********************99862667788*********88776414556777788777765 PP

  == domain 2  score: 18.0 bits;  conditional E-value: 2.2e-06
        Cnd1  29 rLkDedpyVRktaaivvakL..ilnd..mvkekgflselaklleDenprVvanalaalteiseksenaiynllpdiisklsdalnecse 113
                   + e+p +R  a++++ +   i+ +  +     fl++ ++l +D++p+V++n+  al  +++  +++i  +l +i+ +++ + +++++
  EPX73852.1 187 LARNENPKIRTDALFCLNQFllIQSQslYAHIDTFLETCYSLATDTSPNVRKNVCQALVYLLDVRPDKIAPSLGSIVEYMLYSTQDMDQ 275
                 56789*************9877776654566777******************************99***99999999999975555443 PP

  == domain 3  score: -0.0 bits;  conditional E-value: 0.8
        Cnd1   9 tlgcirvpnlveylvepLrkrLkDedpyVRktaaivvakL...ilndmvkekg.flselaklleDenprVva 76 
                 +l++   ++l+e ++++L+ +L  +d  +++  ++++  +      +m++    +   l++ll+ ++p V++
  EPX73852.1 406 ALSASWSQKLLEVILPHLKDSLMSSDWKIQEAGVLALGAIaegCMDGMIQYLPeLYPYLLSLLDSNKPLVRT 477
                 555555666777777777777777777666666666666655555555555554555555555555555555 PP

  == domain 4  score: 6.8 bits;  conditional E-value: 0.0066
        Cnd1  59 flselaklleDenprVvanalaalteiseksenaiynllpdiisklsdalnecsewgq 116
                 ++++l++++ D+n++V++   +a+  + e+++ +++  l  i+ ++  a ++ ++++ 
  EPX73852.1 506 LIEKLLRMVVDNNKKVQEAGCSAFAILEEQAGHTLVPFLEPILTNFAFAFQKYQRKNL 563
                 689999999***************9999998888888888888877766555555555 PP

  == domain 5  score: -1.8 bits;  conditional E-value: 2.8
        Cnd1  28 krLkDedpyVRktaaivv 45 
                  + kDe + VR+ a  ++
  EPX73852.1 700 VCAKDEVAEVRQSAYALL 717
                 566777777777776554 PP

>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1       3.9   3.9e+03       8      33 ..       7      33 ..       5      35 .. 0.76
   2 !   13.3   0.0   6.7e-05     0.066      13      40 ..     132     160 ..     130     161 .. 0.95
   3 ?    2.8   0.0      0.13   1.3e+02      14      33 ..     181     200 ..     180     203 .. 0.93
   4 ?    3.6   0.1     0.073        72      20      39 ..     228     247 ..     222     249 .. 0.87
   5 !    9.2   0.0    0.0013       1.3      15      38 ..     462     485 ..     452     488 .. 0.90
   6 ?   -2.1   0.0       4.7   4.7e+03      14      33 ..     779     800 ..     776     806 .. 0.78

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 3.9
                HHHTTHHHHHHHHTT.TSSHHHHHHHH CS
         Arm  8 vieaGavppLvrLLs.sedeevqeeAa 33
                v +  ++ +L + ++ s +e+ q+ Aa
  EPX73852.1  7 VLQEQVLLQLSEVIKnSLSEDSQTRAA 33
                677778888888889988888888777 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 6.7e-05
                 HHHHHHHHTT.TSSHHHHHHHHHHHHHHT CS
         Arm  13 avppLvrLLs.sedeevqeeAawALsNLa 40 
                 ++p+L+++Ls s+  ++qe A +AL+ ++
  EPX73852.1 132 VLPQLMDMLSgSTPSTTQEGAFSALTKIC 160
                 79************************999 PP

  == domain 3  score: 2.8 bits;  conditional E-value: 0.13
                 HHHHHHHTTTSSHHHHHHHH CS
         Arm  14 vppLvrLLssedeevqeeAa 33 
                 +p++++L ++e+++++++A+
  EPX73852.1 181 IPRFIELARNENPKIRTDAL 200
                 8***************9997 PP

  == domain 4  score: 3.6 bits;  conditional E-value: 0.073
                 HTTTSSHHHHHHHHHHHHHH CS
         Arm  20 LLssedeevqeeAawALsNL 39 
                 L ++++++v+++++ AL +L
  EPX73852.1 228 LATDTSPNVRKNVCQALVYL 247
                 77899************998 PP

  == domain 5  score: 9.2 bits;  conditional E-value: 0.0013
                 HHHHHHTTTSSHHHHHHHHHHHHH CS
         Arm  15 ppLvrLLssedeevqeeAawALsN 38 
                 p L++LL+s ++ v++  +w+L+ 
  EPX73852.1 462 PYLLSLLDSNKPLVRTITCWTLGR 485
                 669*******************86 PP

  == domain 6  score: -2.1 bits;  conditional E-value: 4.7
                 HHHHHHHTT..TSSHHHHHHHH CS
         Arm  14 vppLvrLLs..sedeevqeeAa 33 
                 +++L+  ++    + +v+e++a
  EPX73852.1 779 LERLICIIQsgKANSTVLENVA 800
                 6788888998888888988887 PP

>> Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0     0.027        27      25      87 ..     177     239 ..     151     249 .. 0.84
   2 !   11.8   0.1   0.00028      0.28       7      85 ..     200     278 ..     194     287 .. 0.87
   3 ?    6.6   0.0     0.012        12      21      56 ..     255     290 ..     243     320 .. 0.82
   4 ?    3.8   0.0     0.089        89      16      85 ..     403     476 ..     396     485 .. 0.68
   5 ?    6.5   0.0     0.013        13       3      87 ..     435     524 ..     433     532 .. 0.82
   6 ?    4.1   0.0     0.072        72      17      70 ..     493     548 ..     483     556 .. 0.76

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.027
  Vac14_Fab1_bd  25 leeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalvklvaDsdesvksg 87 
                    l+ +++  ++  + ++ ++R  a  +l     +  +++  ++ + +++ ++l++D+ ++v++ 
     EPX73852.1 177 LDFMIPRFIELARNENPKIRTDALFCLNQFLLIQSQSLYAHIDTFLETCYSLATDTSPNVRKN 239
                    677888889999999999999888888888888888888999999999999999999999975 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 0.00028
  Vac14_Fab1_bd   7 ligLaavaialekkikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalvklvaDsdesvk 85 
                    l  L    +  ++++  ++++++++  +  +D++  vR  +c +l  +  v  +++   l +i +++   + D+d+ v 
     EPX73852.1 200 LFCLNQFLLIQSQSLYAHIDTFLETCYSLATDTSPNVRKNVCQALVYLLDVRPDKIAPSLGSIVEYMLYSTQDMDQTVA 278
                    5555555555566688999********************************************************9985 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.012
  Vac14_Fab1_bd  21 ikeyleeivkpvlkcfsDkdsrvRyyacEslyniak 56 
                    i++ l +iv+ +l + +D d+ v   acE    i+ 
     EPX73852.1 255 IAPSLGSIVEYMLYSTQDMDQTVALEACEFWLAISE 290
                    7788999**********************8877765 PP

  == domain 4  score: 3.8 bits;  conditional E-value: 0.089
  Vac14_Fab1_bd  16 alekkikeyleeivkpvlkcfsD....kdsrvRyyacEslyniakvakgevlkllneifdalvklvaDsdesvk 85 
                    al++ +++  +++++++l  ++D    +d ++    + +l  ia  + + ++++l e++ +l +l+  +++ v+
     EPX73852.1 403 ALDALSASWSQKLLEVILPHLKDslmsSDWKIQEAGVLALGAIAEGCMDGMIQYLPELYPYLLSLLDSNKPLVR 476
                    45555555555555555555555222257777777777888899999999999999999998888766665555 PP

  == domain 5  score: 6.5 bits;  conditional E-value: 0.013
  Vac14_Fab1_bd   3 rkggligLaavaialekkikeyleeivkpvlkcfsDkdsrvRyyacEsl..yniakva...kgevlkllneifdalvklvaDsdesvksg 87 
                    +++g+++L a+a +    + +yl e+ + +l+ ++ +   vR  +c +l  y    ++   + +  k++  + + l ++v D++++v+++
     EPX73852.1 435 QEAGVLALGAIAEGCMDGMIQYLPELYPYLLSLLDSNKPLVRTITCWTLgrYSSWATCldsEVDRQKYFIPLIEKLLRMVVDNNKKVQEA 524
                    57899999999999999999***********999999999****9999866544444410044455699999999999999999999987 PP

  == domain 6  score: 4.1 bits;  conditional E-value: 0.072
  Vac14_Fab1_bd  17 lekk..ikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneif 70 
                    l+++   ++y+  +++ +l+++ D++++v    c ++  +  +a ++++ +l+ i+
     EPX73852.1 493 LDSEvdRQKYFIPLIEKLLRMVVDNNKKVQEAGCSAFAILEEQAGHTLVPFLEPIL 548
                    44443367888899999999999999999999998877777777777777777765 PP

>> IBN_N  Importin-beta N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.2     0.045        45      11      41 ..       9      40 ..       5      41 .. 0.82
   2 !   18.8   0.0   1.2e-06    0.0012       3      44 ..      36      78 ..      34      83 .. 0.87

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.045
                STCHHHHHHHHHHCTTSH.HHHHHHHHHHHHH CS
       IBN_N 11 qpgflsallqilansese.levRqlAalyLkn 41
                q++ l++l++++ ns se  ++R +A+ +L++
  EPX73852.1  9 QEQVLLQLSEVIKNSLSEdSQTRAAALNLLEK 40
                78999*********655535******999987 PP

  == domain 2  score: 18.8 bits;  conditional E-value: 1.2e-06
                HHHHHHHCSTCHHHHHHHHHHC.TTSHHHHHHHHHHHHHHHHH CS
       IBN_N  3 kqLkqlekqpgflsallqilan.seselevRqlAalyLknlit 44
                + L++ +  p+ +++l  il n  e++ ++R +A+l+Lkn+++
  EPX73852.1 36 NLLEKTKDIPDVNNYLACILINgAELSVPIRSAAGLLLKNNLR 78
                45888888**************666668*************97 PP

>> DUF3385  Domain of unknown function (DUF3385)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       2.4   2.4e+03       4      34 ..       5      37 ..       4      38 .. 0.77
   2 !    6.6   0.0    0.0065       6.5     113     156 ..     115     159 ..      91     162 .. 0.90
   3 ?   -0.8   0.0       1.2   1.2e+03     101     142 ..     234     275 ..     211     284 .. 0.77
   4 ?   -2.5   0.0       4.3   4.3e+03     123     136 ..     299     312 ..     292     318 .. 0.81
   5 ?   -0.4   0.0      0.95   9.4e+02      91     142 ..     419     473 ..     369     489 .. 0.73
   6 !    6.9   0.0    0.0054       5.4      83     160 ..     502     577 ..     485     578 .. 0.78
   7 ?   -2.0   0.0       3.1   3.1e+03     108     146 ..     669     707 ..     632     720 .. 0.77
   8 ?   -1.8   0.0       2.6   2.6e+03      10      39 ..     777     807 ..     772     815 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 2.4
     DUF3385  4 PyleypqLLelLlnilkte..qsqsirrevikl 34
                P++   q+L +L +++k++  ++ ++r  ++ l
  EPX73852.1  5 PWVLQEQVLLQLSEVIKNSlsEDSQTRAAALNL 37
                888899999999999999973477777777766 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0065
     DUF3385 113 nifktlglkc.vpfLdqiipallsvirtteesnlrefllqqLatL 156
                 n+++tl ++  v++ ++++p+l+ +++ +++s+ +e  +++L+++
  EPX73852.1 115 NVITTLISRWgVSTWPEVLPQLMDMLSGSTPSTTQEGAFSALTKI 159
                 6677777777799*****************************987 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 1.2
     DUF3385 101 sshhaavveaimnifktlglkcvpfLdqiipallsvirttee 142
                  + +++v +a+++ +     k  p L  i+  +l  ++++++
  EPX73852.1 234 PNVRKNVCQALVYLLDVRPDKIAPSLGSIVEYMLYSTQDMDQ 275
                 356788999999999988888899999999888888777665 PP

  == domain 4  score: -2.5 bits;  conditional E-value: 4.3
     DUF3385 123 vpfLdqiipallsv 136
                  p+Ld+i+p ll+ 
  EPX73852.1 299 GPYLDKIVPMLLRG 312
                 58*******99975 PP

  == domain 5  score: -0.4 bits;  conditional E-value: 0.95
     DUF3385  91 Llrilkdpsls...shhaavveaimnifktlglkcvpfLdqiipallsvirttee 142
                 +l  lkd+ +s   + ++a v a+  i +    +++++L+++ p lls++ + ++
  EPX73852.1 419 ILPHLKDSLMSsdwKIQEAGVLALGAIAEGCMDGMIQYLPELYPYLLSLLDSNKP 473
                 3344466666632335678888889999988889999999999999998886554 PP

  == domain 6  score: 6.9 bits;  conditional E-value: 0.0054
     DUF3385  83 yptvvinaLlrilkdpslsshhaavveaimnifktlglkcvpfLdqiipallsvirtteesnlrefllqqLatLvsiv 160
                 y    i++Llr++ d++ ++ ++a  +a     ++ g   vpfL+ i+ ++  + ++ ++ + +  l+++++tL  +v
  EPX73852.1 502 YFIPLIEKLLRMVVDNN-KKVQEAGCSAFAILEEQAGHTLVPFLEPILTNFAFAFQKYQR-KNLLILYDAVQTLADYV 577
                 44557999*****9999.5577888888888888889999*****************999.55556777888887766 PP

  == domain 7  score: -2.0 bits;  conditional E-value: 3.1
     DUF3385 108 veaimnifktlglkcvpfLdqiipallsvirtteesnlr 146
                 ++ i  i++ lg++  p++ q  p + ++i  +++ ++ 
  EPX73852.1 669 LDLISGIIQALGSQIAPLIAQADPPMGQIIGVCAKDEVA 707
                 556778888888888888888888877777776665444 PP

  == domain 8  score: -1.8 bits;  conditional E-value: 2.6
     DUF3385  10 qLLelLlnilkteq.sqsirrevikllGilG 39 
                  LLe L+ i+++ + + ++ ++v+ ++G lG
  EPX73852.1 777 PLLERLICIIQSGKaNSTVLENVAITIGRLG 807
                 69*********99647777778888899998 PP

>> Adaptin_N  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1      0.56   5.6e+02     453     482 ..      13      42 ..       7      55 .. 0.78
   2 ?   -2.6   0.0       1.5   1.5e+03      92     142 ..     106     160 ..      96     173 .. 0.46
   3 !   12.4   0.1   4.2e-05     0.042      90     189 ..     190     298 ..     179     323 .. 0.71
   4 ?    3.7   0.0     0.019        19     145     242 ..     412     516 ..     393     596 .. 0.66

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.56
                 HHHHHCTTTTTTTSXHHHHHHHHHHHHHHH CS
   Adaptin_N 453 sdllrslaekfvlesekvklqiltalvKly 482
                   +l+ ++++  +e  ++++++l++l K +
  EPX73852.1  13 LLQLSEVIKNSLSEDSQTRAAALNLLEKTK 42 
                 456777888888999999999999999876 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.5
                 SHHHHHHHHHHHCCC--C...CCHHHHHHHHHHHHT-SSHHHHHH.HHHHHHHCC CS
   Adaptin_N  92 nqlirglALrvLssirvp...elaedlapaikkllkdrspyvrkk.Aalailkly 142
                  +lirg+  +v+++++++   ++ + ++p+++++l+ ++p+  ++ A  a++k+ 
  EPX73852.1 106 QPLIRGISGNVITTLISRwgvSTWPEVLPQLMDMLSGSTPSTTQEgAFSALTKIC 160
                 5555555544444444332113445555555555554444333330223333333 PP

  == domain 3  score: 12.4 bits;  conditional E-value: 4.2e-05
                 SSSHHHHHHHHHHHCCC-...-CCCH...HHHHHHHHHHHT-SSHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHCT...T-SSHHHHHHHHHHHHHH CS
   Adaptin_N  90 dpnqlirglALrvLssir...vpela...edlapaikkllkdrspyvrkkAalailklykkdpdllrkqlveeikell...sdkdpgvvlaAvalleei 179
                 + n+ ir  AL +L ++    +++l    + ++++  +l++d+sp vrk+  +a++ l+++ pd + + l + ++  l   +d d+ v l A      i
  EPX73852.1 190 NENPKIRTDALFCLNQFLliqSQSLYahiDTFLETCYSLATDTSPNVRKNVCQALVYLLDVRPDKIAPSLGSIVEYMLystQDMDQTVALEACEFWLAI 288
                 678889999998888755555888883334444444455779999999999999999999999999999666666666766777777777777777777 PP

                 HCCCCCCCHH CS
   Adaptin_N 180 kkndrlllkl 189
                   +++l ++l
  EPX73852.1 289 SEQPDLCSSL 298
                 4444443344 PP

  == domain 4  score: 3.7 bits;  conditional E-value: 0.019
                 CHHCCCCCHHHHHHHCTT-SSHHHHHHHHHHHHHH..HCCCCCCCHHHHHHHCCHHHHHHCS-HHHHHHHHHHHCC---SSHHHH......HHHHHHHC CS
   Adaptin_N 145 dpdllrkqlveeikellsdkdpgvvlaAvalleei..kkndrlllkllpklvrrLcnllteldpwlqvkiiklltrlarqepeersk....kellesll 237
                 +++ll+   ++++k++l ++d +++ a v +l  i   + d + ++ lp+l+  L  ll +  p+  ++   +l r++   + ++s+    k +++ ++
  EPX73852.1 412 SQKLLEV-ILPHLKDSLMSSDWKIQEAGVLALGAIaeGCMDGM-IQYLPELYPYLLSLLDSNKPLVRTITCWTLGRYSSWATCLDSEvdrqKYFIPLIE 508
                 4445444.47777777777777777777777777764444444.5777777777777777777777777777777776666666644455555555555 PP

                 GGCG...C CS
   Adaptin_N 238 nllq...s 242
                 +ll+    
  EPX73852.1 509 KLLRmvvD 516
                 55554443 PP

>> RTP1_C1  Required for nuclear transport of RNA pol II C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.75   7.5e+02      17      48 ..      10      41 ..       3      57 .. 0.69
   2 !   16.8   0.0   5.8e-06    0.0058       5      94 ..     185     275 ..     182     290 .. 0.86
   3 ?   -1.2   0.0       2.2   2.2e+03      38      83 ..     416     461 ..     398     478 .. 0.70

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.75
     RTP1_C1 17 ahglvlLrkliekkskeavldiekilklllea 48
                 + l++L+++i+++ +e+ ++  + l+ll ++
  EPX73852.1 10 EQVLLQLSEVIKNSLSEDSQTRAAALNLLEKT 41
                56678888888888888888877777777654 PP

  == domain 2  score: 16.8 bits;  conditional E-value: 5.8e-06
     RTP1_C1   5 lkdlqdpllpvrahglvlLrkliekkskeavldiekilkllleaLkdedsYvYLnaikgLvaLadvfpeevlklLleey.eeenekeslde 94 
                 ++  +++ + +r+ +l  L++ +  +s++  ++i++ l+++ +  +d+ + v  n+ ++Lv L dv p+++ + L + +     +++++d+
  EPX73852.1 185 IELARNENPKIRTDALFCLNQFLLIQSQSLYAHIDTFLETCYSLATDTSPNVRKNVCQALVYLLDVRPDKIAPSLGSIVeYMLYSTQDMDQ 275
                 566778899************99999999**********************************************9877423344445554 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 2.2
     RTP1_C1  38 iekilkllleaLkdedsYvYLnaikgLvaLadvfpeevlklLleey 83 
                 +e il  l+++L  +d  +  + + +L a+a+ + + +++ L e y
  EPX73852.1 416 LEVILPHLKDSLMSSDWKIQEAGVLALGAIAEGCMDGMIQYLPELY 461
                 4445555555555667777777788888888888888888888777 PP

>> UNC45-central  Myosin-binding striated muscle assembly central
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       4.4   4.4e+03      33      79 ..      26      72 ..       7      95 .. 0.50
   2 !   15.8   0.2     1e-05      0.01      11     106 ..     188     283 ..     131     287 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 4.4
                   HHHHHHHHHHHHHHHHHSCCTHHHHHHHHHHHHHHHHSSHHHHHHHH CS
  UNC45-central 33 akeefeeaiseflesllekgdeddllnalsvltalFpvvpdvasalf 79
                   +  +++ a  + le+  + +d +++l+ + +  a + v+  +a+ l+
     EPX73852.1 26 EDSQTRAAALNLLEKTKDIPDVNNYLACILINGAELSVPIRSAAGLL 72
                   33333344444444444455555555555555555555555555555 PP

  == domain 2  score: 15.8 bits;  conditional E-value: 1e-05
                    -T---TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH...SCCTHHHHHHHHHHHHHHHHSSHHHHHHHHTSTTHHHHHHHHHHS.S-HHHHHH CS
  UNC45-central  11 dmrqpesvrslallilsklldaakeefeeaiseflesll...ekgdeddllnalsvltalFpvvpdvasalflsegflesllelveskkskkvqla 103
                     +++ +++r+ al +l+++l  + ++++  i++fle++    ++++ +  +n++++l  l+ v pd ++  + s  ++e++l   +   +++v l+
     EPX73852.1 188 ARNENPKIRTDALFCLNQFLLIQSQSLYAHIDTFLETCYslaTDTSPNVRKNVCQALVYLLDVRPDKIAPSLGS--IVEYMLYSTQD-MDQTVALE 280
                    448899******************************9999999****************************999..99999999775.78888887 PP

                    HHH CS
  UNC45-central 104 ale 106
                    a+e
     EPX73852.1 281 ACE 283
                    776 PP

>> Cnd3  Nuclear condensing complex subunits, C-term domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.0   3.7e-05     0.037      34      91 ..     187     248 ..     180     257 .. 0.89
   2 ?   -1.4   0.0         1     1e+03      42     129 ..     795     886 ..     768     899 .. 0.60

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 3.7e-05
                 HHC-SSHHHHHHHHHHHHHHHTT-HHHHHHHHHHHH.HHHH...HS-HHHHHHHHHHHHHHH CS
        Cnd3  34 avrskeaairelglkcLglfclldkklakenlklfl.qals...kgneelkiialkaifDll 91 
                  +r+++++ir  +l cL  f l++ +    ++++fl +++s    + ++++  +++a++ ll
  EPX73852.1 187 LARNENPKIRTDALFCLNQFLLIQSQSLYAHIDTFLeTCYSlatDTSPNVRKNVCQALVYLL 248
                 57899*******************************6777799544999********98666 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHH....HS.-HHHHHHHHHHHHHHHHHH-CGGGGGGHH...............HHHHHHHHHHC CS
        Cnd3  42 irelglkcLglfclldkklakenlklflqals....kg.neelkiialkaifDllllhglevldkekkedsd.eeeeesessksllkllykaLd 129
                 + e+   + g +++ + +l   +l+lf+q       +  ++e k +a +  + +l   + ++           +e+e  + s +l +++ k+L+
  EPX73852.1 795 VLENVAITIGRLGMYNPELVAPHLQLFYQPWFeiikTIgENEEKDSAFRGFCNILACNPQSLSYLLPMFVTCvAEYE--KPSMELQDMFQKILQ 886
                 44444446777888888888888888876433345333366777777777777777766666555555555443333..335566666666665 PP

>> CLASP_N  CLASP N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.051        51     140     219 ..      59     141 ..       9     149 .. 0.66
   2 !    6.2   0.0    0.0066       6.5     135     210 ..     185     254 ..     131     264 .. 0.84
   3 ?   -0.3   0.0      0.68   6.7e+02      65     122 ..     475     533 ..     413     544 .. 0.45
   4 ?   -1.9   0.0       2.1   2.1e+03      78     108 ..     761     791 ..     748     803 .. 0.81

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.051
     CLASP_N 140 qdKnvqpReysaiwLkilltrfeshkskleasllldliekslkkgleDanptVRetaRstfwef.....fkvwPsrAksllssld 219
                  + +v +R+ +  +Lk+ l+ ++++ ++  +sl  d  + ++++gl D++p +R  + +++ ++      ++wP+   +l+++l+
  EPX73852.1  59 AELSVPIRSAAGLLLKNNLRVSNIELAHGLQSL--DYTKSTVVRGLCDSQPLIRGISGNVITTLisrwgVSTWPEVLPQLMDMLS 141
                 356888999999999999999994444333333..889999*************9888888888666666667766666666665 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.0066
     CLASP_N 135 lsvalqdKnvqpReysaiwLkilltrfeshkskleasllldliekslkkgleDanptVRetaRstfweffkvwPsr 210
                 +++a ++ n+++R+ ++  L+++l  ++   ++l a+   d++ ++  ++ +D +p+VR++  ++++++ +v+P++
  EPX73852.1 185 IELARNE-NPKIRTDALFCLNQFLLIQS---QSLYAHI--DTFLETCYSLATDTSPNVRKNVCQALVYLLDVRPDK 254
                 5555555.88888888888888888877...5666666..788888899999999999999999999999999975 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.68
     CLASP_N  65 Lrttlsstgchllkelaiqlkeqldpm..veillptLlkllgdtKkiisqnanqalaall 122
                 +rt  + t++   +  a  l +++d +     l++ Ll+++ d+ k + +++  a+a l 
  EPX73852.1 475 VRTITCWTLGR-YSSWATCLDSEVDRQkyFIPLIEKLLRMVVDNNKKVQEAGCSAFAILE 533
                 33333333333.233333344444433324445555666666666666666666665555 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 2.1
     CLASP_N  78 kelaiqlkeqldpmveillptLlkllgdtKk 108
                  e+a ql+++++p+v+ ll+ L+  +++ K 
  EPX73852.1 761 GEMALQLGKDMQPWVKPLLERLICIIQSGKA 791
                 5899****************99998888775 PP

>> Tti2  Tti2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.31   3.1e+02     118     156 ..     174     212 ..     155     224 .. 0.82
   2 ?   -1.9   0.0       1.9   1.9e+03     130     157 ..     227     254 ..     209     270 .. 0.80
   3 ?    7.4   0.0    0.0027       2.7      91     147 ..     429     483 ..     400     488 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.31
        Tti2 118 eanwplivPpiLnllDdtdtsvKlrGlklLqtllekles 156
                  + + +++P  + l+ ++++++++ +l +L+++l   ++
  EPX73852.1 174 TRPLDFMIPRFIELARNENPKIRTDALFCLNQFLLIQSQ 212
                 46788999999**********************976555 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.9
        Tti2 130 nllDdtdtsvKlrGlklLqtllekless 157
                 +l+ dt+++v+ + ++ L +ll+  +++
  EPX73852.1 227 SLATDTSPNVRKNVCQALVYLLDVRPDK 254
                 6778999***********9999988776 PP

  == domain 3  score: 7.4 bits;  conditional E-value: 0.0027
        Tti2  91 rkpWksgdlkaisvlawiirqlqskeieanwplivPpiLnllDdtdtsvKlrGlklL 147
                  + Wk ++  ++++ a++   ++     +++p + P +L+llD++++ v++  +  L
  EPX73852.1 429 SSDWKIQEAGVLALGAIAEGCMDGMI--QYLPELYPYLLSLLDSNKPLVRTITCWTL 483
                 37899999999999999988888885..8*********************9988766 PP

>> MMS19_C  RNAPII transcription regulator C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       2.2   2.1e+03       1      31 [.     134     161 ..     115     170 .. 0.69
   2 ?   -1.1   0.0       0.8     8e+02     369     389 ..     299     319 ..     295     324 .. 0.82
   3 ?    7.4   0.0     0.002         2     326     394 ..     412     479 ..     411     520 .. 0.85
   4 ?   -2.5   0.0       2.1   2.1e+03      36     131 ..     587     679 ..     576     684 .. 0.48

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 2.2
     MMS19_C   1 pallatLpdsaseasasayervLeaLaelss 31 
                 p+l+++L  s ++++    e + +aL+++++
  EPX73852.1 134 PQLMDMLSGSTPSTT---QEGAFSALTKICE 161
                 455555555554444...3456666666665 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.8
     MMS19_C 369 lpeLptLlPlLlqaLdlpdae 389
                  p+L +++P+Ll+++  +d +
  EPX73852.1 299 GPYLDKIVPMLLRGMVYSDMD 319
                 589999******999887766 PP

  == domain 3  score: 7.4 bits;  conditional E-value: 0.002
     MMS19_C 326 kQrfFstvlpklvegfkssdsetkenyLvALshllkhvPkslllpeLptLlPlLlqaLdlpdaevkast 394
                  Q++ + +lp l ++  ssd +++e+   AL  + +    + ++++Lp+L P Ll  Ld +++ v++ t
  EPX73852.1 412 SQKLLEVILPHLKDSLMSSDWKIQEAGVLALGAIAEGC-MDGMIQYLPELYPYLLSLLDSNKPLVRTIT 479
                 6******************************9887766.56789******************9999765 PP

  == domain 4  score: -2.5 bits;  conditional E-value: 2.1
     MMS19_C  36 fetlvirllnkldlvlksnessaayahailstllkllekkqtdlekeellnsyydrivprlltl..vvsaastss.siltddrllevlgriinlivrsl 131
                 +e l++ ll+k +++++++ +     + +l++l ++  + + +   ++ ++ y+ ++   l++   +++a++t+   +  d  +l ++ ++i+ i++ l
  EPX73852.1 587 VELLMPPLLQKWSTISEDDPN----IFPLLECLSSVAVALK-EGFAPFAAETYARTF-RMLHNTlyLIDASQTDPsIDVPDRDFLVTTLDLISGIIQAL 679
                 566666677777666666654....4445555544444433.122333444443332.22222222222332222455566666666666666666655 PP

>> Importin_rep_4  Importin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00032      0.32       2      64 ..     271     340 ..     270     356 .. 0.82
   2 ?   -3.0   4.7       9.4   9.4e+03      54      66 ..     375     387 ..     364     416 .. 0.59
   3 ?   -2.3   0.0       5.5   5.5e+03      30      47 ..     499     516 ..     497     522 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00032
  Importin_rep_4   2 kdledaaRqsalEllvtlaenaPkmvrkeaefteklvvqvLslm..tev......eddeeWatsddldddd 64 
                     +d+++++   a E   +++e +P ++ +   + +k+v+++L  m  +++      +d++++++ d l+d  
      EPX73852.1 271 QDMDQTVALEACEFWLAISE-QPDLCSSLGPYLDKIVPMLLRGMvySDMdllllgNDADDYNVEDRLEDIR 340
                     7899999999********99.5*******************988345668899988999999999888755 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 9.4
  Importin_rep_4  54 Watsddlddddee 66 
                      +  d+ dddde+
      EPX73852.1 375 DEDDDEFDDDDED 387
                     2222333333333 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 5.5
  Importin_rep_4  30 eaefteklvvqvLslmte 47 
                     +++++  l+ ++L ++ +
      EPX73852.1 499 RQKYFIPLIEKLLRMVVD 516
                     5789**********9866 PP

>> YL1  YL1 nuclear protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   2.8   0.00064      0.64      21      50 ..     365     393 ..     340     434 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00064
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         YL1  21 edelellFaEeedDeefeseeeeeeeensD 50 
                  de+++l +E+edD+ef +++e+ +  + D
  EPX73852.1 365 NDEFDELEEEDEDDDEFDDDDEDADA-FMD 393
                 799999999********998887665.333 PP

>> PBP1_TM  Transmembrane domain of transglycosylase PBP1 at N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   7.9    0.0058       5.8       6      53 ..     339     387 ..     334     401 .. 0.71

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0058
     PBP1_TM   6 RePiGRkGkkakakparkkasrrrrrdddydd.eyddeedDdd.dddeee 53 
                   P   kGk + +  + + a r+   +d++d+ e +d edDd+ ddd+e+
  EPX73852.1 339 IRPQHAKGKSRVTMDTEGPAGRQGGANDEFDElEEED-EDDDEfDDDDED 387
                 56667799999888889999999999******63333.344333444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (914 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       515  (0.0287244); expected 358.6 (0.02)
Passed bias filter:                      465  (0.0259356); expected 358.6 (0.02)
Passed Vit filter:                        75  (0.00418317); expected 17.9 (0.001)
Passed Fwd filter:                        21  (0.00117129); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.86u 0.30s 00:00:01.15 Elapsed: 00:00:00.51
# Mc/sec: 5411.56
//
Query:       EPX73853.1  [L=275]
Description: xylose and arabinose reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      3e-41  141.6   0.0    2.3e-38  132.1   0.0    2.0  1  Aldo_ket_red   Aldo/keto reductase family
  ------ inclusion threshold ------
       0.12   12.7   0.0        5.3    7.4   0.0    2.5  2  SpoU_sub_bind  RNA 2'-O ribose methyltransferase substrate bi


Domain annotation for each model (and alignments):
>> Aldo_ket_red  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.1   0.0   2.6e-42   2.3e-38      14     292 ..      23     260 ..      16     262 .. 0.92

  Alignments for each domain:
  == domain 1  score: 132.1 bits;  conditional E-value: 2.6e-42
                   TS-HHHHHHHHHHHHHTT--EEE--TT-.TTTHHHHHHHHHHHH-TTTGGG-EEEEEE--SSSTTSSSS-HHHHHHHHHHHHHHHT-S-EEEEEE-S CS
  Aldo_ket_red  14 eiskeealellrraleaGinffDtAevY.gkgqseellGealkksrkkreeviiatKvdlrdaeiksglskeniresleeslkrLgtdyvDllllHr 109
                    i++++ ++ + +al++G++++D+A++Y  +g + + + +++k+ + kre++  ++K+       +         +s++ s+k +g+ y+Dl+llH 
    EPX73853.1  23 MINRSKCFDSVYAALQCGYRHVDSAQMYfNEGDCGRAILQFMKDTGTKREDIWYTSKL-------NNLAGYTATLKSIDSSVKACGLGYIDLFLLHS 112
                   5789999999******************889999999999******************.......44444456789********************* PP

                   --TTS-.HHHHHHHHHHHHHTTSEEEEEEES--HHHHHHH.HHTTT--EEEEE-B-BTT-HHHHTTHHHHHHHTT-EEEEBSTTGGGTTGTTTSS-- CS
  Aldo_ket_red 110 pdpslpsieevldaleelvkeGkiraiGvSnfsveqleka.kkkkkvkivavqveynllreleeegllelckkkgvpliaysplggGlltgkyqsee 205
                   p  +       ++alee v++GkiraiGvSnf   +++++   + k+ + ++q+e +++    +++++e+c++kg++l ay pl++G   g+     
    EPX73853.1 113 PYGDRL---GSWKALEEAVEAGKIRAIGVSNFGPHHIQQLlDHHPKIVPCINQIELHPF--CSQSKVVEYCQEKGIALAAYAPLAHGEKFGN----- 199
                   988766...*******************************999****************..99**********************9965544..... PP

                   -SSSCCC-------TS-HHHHHHHHHHHHHHHHTT--HHHHHHHHHTTSTT-SEEEE--SSHHHHHHHHGGGG----HHHHHHHHHH CS
  Aldo_ket_red 206 dkedkeprkdlkrdertsknldaaeelselakehgvslaqlalryalsqpavgivipgasnieqlednldalelklseeevaeldel 292
                                           ++l  +a++++++ aq+ +r++l  +++ iv+p++s++++++ n ++++++ls++e+++l +l
    EPX73853.1 200 ------------------------KQLIGIANKYNKTEAQIMIRFLL--QRGYIVLPKSSTPARIKGNGEVFDFELSNDEMNTLYNL 260
                   ........................4477899****************..9********************************99766 PP

>> SpoU_sub_bind  RNA 2'-O ribose methyltransferase substrate binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.0    0.0006       5.3       7      42 ..      32      70 ..      30      89 .. 0.69
   2 ?    2.7   0.0     0.017   1.6e+02       3      45 ..     141     184 ..     140     186 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0006
  SpoU_sub_bind  7 aVleaLksgrr...iekllvtegradkrleellklakkr 42
                   +V++aL++g r     +++++eg+ ++ + +++k+   +
     EPX73853.1 32 SVYAALQCGYRhvdSAQMYFNEGDCGRAILQFMKDTGTK 70
                   8********888889999*****5555545555544444 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.017
  SpoU_sub_bind   3 yGlhaVleaLksgrr....iekllvtegradkrleellklakkrgik 45 
                    +G h ++ +L+++++    i+++ +++  + ++   ++++++++gi 
     EPX73853.1 141 FGPHHIQQLLDHHPKivpcINQIELHPFCSQSK---VVEYCQEKGIA 184
                    7999*********99888888887777744444...88888888885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (275 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       391  (0.0218082); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1997.37
//
Query:       EPX73854.1  [L=151]
Description: single-stranded DNA binding protein Rim1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.6e-12   45.9   0.0    6.1e-12   45.5   0.0    1.1  1  SSB       Single-strand binding protein family


Domain annotation for each model (and alignments):
>> SSB  Single-strand binding protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.5   0.0   3.4e-16   6.1e-12       2      82 ..      26     100 ..      25     111 .. 0.94

  Alignments for each domain:
  == domain 1  score: 45.5 bits;  conditional E-value: 3.4e-16
                 CEEEEEEEESSS-EEEEETTSEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEEEHH.HHHHHHHH--TT-EEEEEEEEEEEE CS
         SSB   2 nkvilvGrlgkdpelrqtesGnavarftlatnrrfkdqegekdeetewhrvvvfgk.laevvaeylkkGslvyveGrlqtrk 82 
                 ++++ +G+l++d+e  q+++Gn+++++t+a+n+       +kd ++++ +v  f++  ++++++ lkkG++v+ve++  +r+
  EPX73854.1  26 QRLTFTGNLARDAERLQSQQGNPYMKYTVASNN-------GKDVPATFRTVFSFDDrEFDRMETFLKKGNQVFVEANAIYRN 100
                 68899****************************.......9***********************************998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       448  (0.0249875); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1104.82
//
Query:       EPX73855.1  [L=427]
Description: DNA-directed RNA polymerase I complex subunit Rpa49 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   4.4e-104  348.4   2.7   5.4e-104  348.1   2.7    1.1  1  RNA_pol_I_A49  A49-like RNA polymerase I associated factor
  ------ inclusion threshold ------
       0.13   12.5   0.0       0.29   11.3   0.0    1.5  1  Stealth_CR2    Stealth protein CR2, conserved region 2


Domain annotation for each model (and alignments):
>> RNA_pol_I_A49  A49-like RNA polymerase I associated factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  348.1   2.7    6e-108  5.4e-104       1     384 [.      49     424 ..      49     425 .. 0.96

  Alignments for each domain:
  == domain 1  score: 348.1 bits;  conditional E-value: 6e-108
                    -TT-EEEEEE......E-----EEEEEE-SSEEEEEE--HHHHHHE...EEEEEEEETTTTEEEEEEE-E.EEEEEEESSTTTXXXXXX.....XX CS
  RNA_pol_I_A49   1 peslkFslykekekskkrkkselllvgeterleYvgknegegssaenllrylvGvydketgelelypapl.ftlrpsvkakkseseeee...edes 92 
                    pe+++F++      ++ +k s++ l g+ter+++++k++++++ ++   +y++++ dk+ +  +l+p++   t++++v + ++++e+++      +
     EPX73855.1  49 PEETRFQPVH----TDGKKTSDISLIGRTERVQFEAKSKSTSNVES---NYCLAIADKHGRVKKLVPTRYlNTFERQVLSMREKDEHMKkqrGIVA 137
                    6899***999....999***************************99...9*****************77637899999888777777775667889 PP

                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  RNA_pol_I_A49  93 ktyaekraaLgeaFGtkKakkalrsrernkvdsealeevedailesikeataslptkeelqaavassrplPpanldAtepedVYplsdlissaele 188
                     t++e+ra+Lg aFGtkK +ka+ ++  n+v+++al +v+d++++++++at+ lp++eel+a +a++rp+Pp+++dA+++ed+Y+l+d+i+++e++
     EPX73855.1 138 GTVMEQRANLGLAFGTKKNQKAIMEESANRVKADALGDVKDQLVSNVQKATEALPSQEELEAYQAQDRPIPPVHMDAETVEDAYKLEDIIPKEEMS 233
                    9*********************************************************************************************** PP

                    XXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXX.XXX....XXXXXXXXXXXXXXXXXXXXXXX CS
  RNA_pol_I_A49 189 alevkalekaadkeervellpykskssfvakrlekllqkseeaakkklrllyYlslLlkfysarrsvrkrgtekeklkeklesvpeiiidkllrkF 284
                    a+ +k +++ a+++   ++lpy ++s fv++r ++ll+ +e  + k+++llyY+slL +f   rr v +    +++l++kl+++pei++d+l ++F
     EPX73855.1 234 AIYIKPFLDSAEDKGWSKMLPY-RHSVFVNERFSRLLSIEE-VDHKRAKLLYYISLLEAFLFSRRAVTD----RDTLRRKLADPPEILMDGLYKRF 323
                    **********************.****************99.***********************9999....99********************* PP

                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXX CS
  RNA_pol_I_A49 285 teessnnkgkskrlskshkdkLlayilalaLhldnfsvdltdLaedLklkpkklnelfkelGckiskltaaeaealglek....kekiavLklPLk 376
                    t+++ ++ + +  +s ++ d++++yi++l L++dn+s+d+ +La+dL++k  k+nelfk++Gc+i + +++++ algl+k    ++k+avLk+PL+
     EPX73855.1 324 TQTTGTG-SVQ--VSMRQVDRIMCYIIVLYLIVDNYSTDILTLANDLNIKVMKANELFKTVGCRIMAYSETQRMALGLNKteakSHKRAVLKVPLE 416
                    ***9954.444..9********************************************************************************** PP

                    XXXXXXXX CS
  RNA_pol_I_A49 377 fpkvrrgr 384
                    fp++rrgr
     EPX73855.1 417 FPRPRRGR 424
                    ******98 PP

>> Stealth_CR2  Stealth protein CR2, conserved region 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   3.2e-05      0.29       6      55 ..     330     380 ..     325     400 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 3.2e-05
  Stealth_CR2   6 deLkYslrsvekyapwvrkiyivtdgqvpewlntenp.kikvvkhkdilke 55 
                  ++++ s+r v++ + ++  +y+++d+   + l  +n+ +ikv+k ++++k+
   EPX73855.1 330 GSVQVSMRQVDRIMCYIIVLYLIVDNYSTDILTLANDlNIKVMKANELFKT 380
                  567889******************************99**********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (427 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       824  (0.0459591); expected 358.6 (0.02)
Passed bias filter:                      503  (0.0280551); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 3054.38
//
Query:       EPX73856.1  [L=192]
Description: ER protein translocation subcomplex subunit Sec72 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-06   27.0  10.2       0.17   11.7   1.0    4.1  4  TPR_1     Tetratricopeptide repeat
    4.8e-05   23.2  10.3        0.2   11.9   1.4    3.9  4  TPR_2     Tetratricopeptide repeat
     0.0084   16.4   3.9       0.24   11.7   0.5    3.1  4  TPR_12    Tetratricopeptide repeat
  ------ inclusion threshold ------
       0.01   15.3   0.0      0.019   14.4   0.0    1.5  1  SHNi-TPR  SHNi-TPR
      0.021   15.3   2.8       0.06   13.9   1.1    2.2  2  TPR_19    Tetratricopeptide repeat
       0.28   11.5   6.4         19    5.8   0.0    3.6  4  TPR_8     Tetratricopeptide repeat
       0.54   10.0   3.0        3.6    7.3   0.4    2.4  2  TPR_11    TPR repeat
       0.82    9.8   5.6       0.29   11.2   0.3    2.8  4  MIT       MIT (microtubule interacting and transport) domain
        1.1    9.9   5.2        5.2    7.8   0.1    2.9  3  TPR_16    Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.26   5.1e+02      10      24 ..      25      39 ..      24      40 .. 0.80
   2 !   11.7   1.0   8.6e-05      0.17       8      30 ..      69      91 ..      66      94 .. 0.92
   3 !   11.1   0.1   0.00014      0.28       4      33 ..     112     141 ..     110     142 .. 0.89
   4 !    7.0   0.1    0.0027       5.3       2      21 ..     144     163 ..     143     165 .. 0.92

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.26
                HHHHTT-HHHHHHHH CS
       TPR_1 10 ayfklgkydeAleyy 24
                +  kl+ky + +  +
  EPX73856.1 25 VQEKLNKYAKSISTF 39
                5689*****998766 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 8.6e-05
                HHHHHHTT-HHHHHHHHHHHHHH CS
       TPR_1  8 GnayfklgkydeAleyyekALel 30
                +n  fk +ky+eA   y  AL l
  EPX73856.1 69 ANEAFKRKKYEEAKRLYTLALHL 91
                7889****************987 PP

  == domain 3  score: 11.1 bits;  conditional E-value: 0.00014
                 HHHHHHHHHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1   4 lynlGnayfklgkydeAleyyekALelnPn 33 
                 l+n+++a ++l ++ eAl++ + AL+++ n
  EPX73856.1 112 LCNRAAAELSLSQFPEALADGNAALKIRNN 141
                 89*****************99999988765 PP

  == domain 4  score: 7.0 bits;  conditional E-value: 0.0027
                 HHHHHHHHHHHHTT-HHHHH CS
       TPR_1   2 kalynlGnayfklgkydeAl 21 
                 k++y+++ a+  + + deA 
  EPX73856.1 144 KCFYRKAKALEAMHRMDEAK 163
                 689****************7 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.71   1.4e+03      11      24 ..      26      39 ..      24      40 .. 0.79
   2 !   11.9   1.4    0.0001       0.2       8      31 ..      69      92 ..      66      94 .. 0.90
   3 !    8.4   0.2    0.0012       2.5       4      33 ..     112     141 ..     110     142 .. 0.92
   4 !    6.0   0.1    0.0076        15       3      26 ..     145     168 ..     143     174 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.71
       TPR_2 11 yyklgdyeeAleaf 24
                 +kl++y++ +  f
  EPX73856.1 26 QEKLNKYAKSISTF 39
                5799****998766 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 0.0001
       TPR_2  8 GlayyklgdyeeAleafekAleld 31
                ++ ++k+++yeeA++++  Al l+
  EPX73856.1 69 ANEAFKRKKYEEAKRLYTLALHLA 92
                67899***************9875 PP

  == domain 3  score: 8.4 bits;  conditional E-value: 0.0012
       TPR_2   4 lynlGlayyklgdyeeAleafekAleldPn 33 
                 l+n++ a + l ++ eAl++ ++Al++  n
  EPX73856.1 112 LCNRAAAELSLSQFPEALADGNAALKIRNN 141
                 689***********************9876 PP

  == domain 4  score: 6.0 bits;  conditional E-value: 0.0076
       TPR_2   3 alynlGlayyklgdyeeAleafek 26 
                 + y+ ++a++++ + +eA++  + 
  EPX73856.1 145 CFYRKAKALEAMHRMDEAKQVVRD 168
                 789***************987665 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       6.3   1.3e+04      57      68 ..      28      39 ..      25      40 .. 0.51
   2 ?    3.8   0.2     0.035        70      14      30 ..      73      89 ..      64      95 .. 0.64
   3 !   11.7   0.5   0.00012      0.24       2      37 ..     108     143 ..     107     174 .. 0.81
   4 ?    0.6   0.0      0.36   7.2e+02       8      24 ..     148     164 ..     143     183 .. 0.76

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 6.3
      TPR_12 57 algryeeAlell 68
                +l++y++ ++ +
  EPX73856.1 28 KLNKYAKSISTF 39
                455555555444 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.035
      TPR_12 14 rrlgrydeAlellekal 30
                +++++y+eA +l+  al
  EPX73856.1 73 FKRKKYEEAKRLYTLAL 89
                44556666666665555 PP

  == domain 3  score: 11.7 bits;  conditional E-value: 0.00012
      TPR_12   2 vatalnnlaavlrrlgrydeAlellekaleiarrll 37 
                 v+t+l n+aa+++ l ++ eAl+  ++al i++++ 
  EPX73856.1 108 VSTMLCNRAAAELSLSQFPEALADGNAALKIRNNYG 143
                 789999*************************97663 PP

  == domain 4  score: 0.6 bits;  conditional E-value: 0.36
      TPR_12   8 nlaavlrrlgrydeAle 24 
                 + a +l ++ r+deA +
  EPX73856.1 148 RKAKALEAMHRMDEAKQ 164
                 56777888888888854 PP

>> SHNi-TPR  SHNi-TPR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   9.8e-06     0.019      15      34 ..     123     142 ..     118     144 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 9.8e-06
    SHNi-TPR  15 enFpqAveDlrkaLeLreql 34 
                 ++Fp+A+ D ++aL++r+++
  EPX73856.1 123 SQFPEALADGNAALKIRNNY 142
                 79***************987 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.45     9e+02       2      17 ..      73      88 ..      72      97 .. 0.73
   2 ?   13.9   1.1     3e-05      0.06       6      49 ..     124     167 ..     116     173 .. 0.91

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.45
      TPR_19  2 laegdyaeAlalleqa 17
                +++++y+eA +l++ a
  EPX73856.1 73 FKRKKYEEAKRLYTLA 88
                5677788888777655 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 3e-05
      TPR_19   6 dyaeAlalleqalqedpknaearllLAeallalgqldeAealLd 49 
                 ++ eAla   +al+  ++++   ++ A+al a+ + deA++++ 
  EPX73856.1 124 QFPEALADGNAALKIRNNYGKCFYRKAKALEAMHRMDEAKQVVR 167
                 77889999999******************************975 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0      0.25     5e+02      11      25 ..      26      40 ..      24      40 .. 0.86
   2 ?    5.6   0.4     0.011        22      10      29 ..      71      90 ..      67      94 .. 0.82
   3 ?   -2.0   0.0       2.9   5.8e+03      12      33 ..     120     141 ..     110     142 .. 0.58
   4 ?    5.8   0.0    0.0096        19       3      23 ..     145     165 ..     143     170 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.25
                HHHTT-HHHHHHHHH CS
       TPR_8 11 ylklgdyeeAkeyye 25
                 +kl++y +++++++
  EPX73856.1 26 QEKLNKYAKSISTFK 40
                579********9986 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.011
                HHHHTT-HHHHHHHHHHHHH CS
       TPR_8 10 iylklgdyeeAkeyyekale 29
                  +k ++yeeAk  y  al 
  EPX73856.1 71 EAFKRKKYEEAKRLYTLALH 90
                567899*********99985 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 2.9
                 HHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8  12 lklgdyeeAkeyyekaleldpd 33 
                 l+l ++ eA +  + al+++ +
  EPX73856.1 120 LSLSQFPEALADGNAALKIRNN 141
                 5555555566655678887765 PP

  == domain 4  score: 5.8 bits;  conditional E-value: 0.0096
                 HHHHHHHHHHHTT-HHHHHHH CS
       TPR_8   3 ayynlgsiylklgdyeeAkey 23 
                   y+++++++ + +++eAk++
  EPX73856.1 145 CFYRKAKALEAMHRMDEAKQV 165
                 679****************97 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.1      0.06   1.2e+02       2      17 ..      70      85 ..      69      91 .. 0.77
   2 ?    7.3   0.4    0.0018       3.6       5      39 ..     120     154 ..     117     156 .. 0.86

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.06
      TPR_11  2 dayyeqGkyeeAieaY 17
                ++ +++ kyeeA   Y
  EPX73856.1 70 NEAFKRKKYEEAKRLY 85
                67799*******6666 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0018
      TPR_11   5 yeqGkyeeAieaYkkAlkldPdnaeayynLGlayy 39 
                  ++ +++eA+++ ++Alk+++++   +y  ++a+ 
  EPX73856.1 120 LSLSQFPEALADGNAALKIRNNYGKCFYRKAKALE 154
                 67889******************999998888876 PP

>> MIT  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       1.9   3.7e+03      47      57 ..      23      33 ..      20      39 .. 0.69
   2 ?   11.2   0.3   0.00015      0.29      11      39 ..      69      97 ..      63     114 .. 0.76
   3 ?   -2.4   0.0       2.6   5.2e+03       7      24 ..     112     129 ..     109     136 .. 0.81
   4 ?   -0.4   0.1      0.61   1.2e+03      49      64 ..     148     163 ..     121     164 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 1.9
         MIT 47 ellrekieeYl 57
                +l++ek+++Y 
  EPX73856.1 23 QLVQEKLNKYA 33
                56677777775 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00015
         MIT 11 AveeDnagnyeeAlelYkealelLlqalk 39
                A e+ ++++yeeA +lY+ al+l l  ++
  EPX73856.1 69 ANEAFKRKKYEEAKRLYTLALHLALNRCS 97
                5566689**************98776666 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 2.6
         MIT   7 lvkkAveeDnagnyeeAl 24 
                 l ++A+ e +  +++eAl
  EPX73856.1 112 LCNRAAAELSLSQFPEAL 129
                 567888888888888887 PP

  == domain 4  score: -0.4 bits;  conditional E-value: 0.61
         MIT  49 lrekieeYleRaeeLk 64 
                  ++k+ e + R++e k
  EPX73856.1 148 RKAKALEAMHRMDEAK 163
                 5788888888888766 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.1    0.0026       5.2       4      24 ..      69      89 ..      67      98 .. 0.87
   2 ?    3.0   0.3      0.08   1.6e+02      39      63 ..     114     138 ..     107     142 .. 0.82
   3 ?   -1.0   0.0       1.5     3e+03       1      21 [.     147     167 ..     147     173 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0026
      TPR_16  4 araalragdyddAaaaleaal 24
                a++a+++++y++A ++++ al
  EPX73856.1 69 ANEAFKRKKYEEAKRLYTLAL 89
                899**************7555 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.08
      TPR_16  39 llgdaalrqgrlaeAaalyraalra 63 
                 +++ a l ++ ++eA+a  +aal+ 
  EPX73856.1 114 NRAAAELSLSQFPEALADGNAALKI 138
                 5788889999999999999999865 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 1.5
      TPR_16   1 lalaraalragdyddAaaale 21 
                 + +a+a+ +  + d+A  + +
  EPX73856.1 147 YRKAKALEAMHRMDEAKQVVR 167
                 678899999999999987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       824  (0.0459591); expected 358.6 (0.02)
Passed bias filter:                      514  (0.0286686); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1395.76
//
Query:       EPX73857.1  [L=319]
Description: mannosyltransferase complex subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.9e-22   79.1   0.1    6.4e-22   78.0   0.1    1.6  1  Gly_transf_sug  Glycosyltransferase sugar-binding region cont
     0.0012   19.2   5.4     0.0048   17.2   0.2    2.3  2  Orf78           Orf78 (ac78)
  ------ inclusion threshold ------
      0.015   14.7   0.6      0.023   14.1   0.6    1.3  1  Caps_synth      Capsular polysaccharide synthesis protein
      0.017   14.9   0.3      0.045   13.6   0.3    1.7  1  COX14           Cytochrome oxidase c assembly
      0.037   14.8   1.1        8.6    7.2   0.4    2.5  2  Cadherin_C_2    Cadherin cytoplasmic C-terminal
      0.061   13.6   6.4       0.83   10.0   0.4    2.6  2  Sigma_reg_N     Sigma factor regulator N-terminal
       0.12   12.6   0.2       0.12   12.6   0.2    2.2  2  COX2_TM         Cytochrome C oxidase subunit II, transmembran
       0.18   11.4   0.9        7.8    6.1   0.2    2.4  2  PIRT            Phosphoinositide-interacting protein family
       0.19   11.7   1.9       0.51   10.3   0.4    2.1  2  Ninjurin        Ninjurin
       0.34   11.8   3.1       0.74   10.7   1.2    2.2  2  EphA2_TM        Ephrin type-A receptor 2 transmembrane domain
        1.1   10.3   3.8        3.8    8.6   1.2    2.2  2  DUF4834         Domain of unknown function (DUF4834)
        1.2    9.3   9.9       0.12   12.4   1.2    2.3  2  DUF3671         Protein of unknown function
        1.9    8.7   5.5        4.2    7.6   0.6    2.2  2  HemY_N          HemY protein N-terminus
        2.4    8.0   4.5         15    5.4   0.1    2.2  2  Tmemb_9         TMEM9
        2.4    7.8   9.4        2.9    7.5   2.9    2.3  2  Baculo_11_kDa   Baculovirus 11 kDa family
        2.9    7.8  22.4        4.6    7.1   2.3    3.3  3  DUF4271         Domain of unknown function (DUF4271)
        3.6    7.6   8.5         11    6.0   1.5    2.3  2  DUF4492         Domain of unknown function (DUF4492)
        3.8    7.9   5.7       0.34   11.3   0.6    1.7  2  DUF1180         Protein of unknown function (DUF1180)


Domain annotation for each model (and alignments):
>> Gly_transf_sug  Glycosyltransferase sugar-binding region containing DXD motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.0   0.1   6.4e-25   6.4e-22       1      97 [.      79     169 ..      79     170 .. 0.96

  Alignments for each domain:
  == domain 1  score: 78.0 bits;  conditional E-value: 6.4e-25
  Gly_transf_sug   1 perekkaieslakahpd...yqvvvlskelekvrvaildlefllsdtpwfeeakkllplfialsDllRlaiLykyGGiYlDtDvivlkslrnsig 92 
                     pe+++ ++ s++ +hp+   + + ++++e          l+f++++++wf+ +++++p+ i++ D++R++i y+yGGiY+D+Dv + k++ ++++
      EPX73857.1  79 PEKWSGSVSSCRAQHPEedgWTINLWTDEKV--------LSFMETHYSWFMPIYNSYPYDIQRFDAVRYFIVYHYGGIYIDLDVGCKKPM-DPLL 164
                     799**************99999999999965........***************************************************.**** PP

  Gly_transf_sug  93 aeerf 97 
                     ++++f
      EPX73857.1 165 DQTTF 169
                     *9988 PP

>> Orf78  Orf78 (ac78)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   1.2     0.079        78      65      86 ..       8      29 ..       2      44 .. 0.72
   2 !   17.2   0.2   4.8e-06    0.0048      62      98 ..     274     310 ..     253     316 .. 0.77

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.079
       Orf78 65 illisllavvcvlvllyviyYf 86
                +l i++  +v +++ll v++Yf
  EPX73857.1  8 LLTIAVSFLVFIFILLKVLLYF 29
                4445555556788888888888 PP

  == domain 2  score: 17.2 bits;  conditional E-value: 4.8e-06
       Orf78  62 alnillisllavvcvlvllyviyYfvilrerqkssvk 98 
                 + +il +  l  +c+lvl++v + fv +r++++s+++
  EPX73857.1 274 QNHILYVITLITICILVLVFVFVKFVTVRRKNRSQRR 310
                 4577888888899*************99998777653 PP

>> Caps_synth  Capsular polysaccharide synthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.6   2.3e-05     0.023      37     198 ..      56     214 ..      43     242 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2.3e-05
  Caps_synth  37 dkkkkkeeenekkIWvlWlqGldnaPeiVkkciksvkkna...edyevvlLtkdNieeYvdlpdfiieklekgkisaahfSDllRleLLkkyGGvWiDa 132
                 ++++ ++    k+I ++W +  +n Pe    +++s + ++   +++++ l t++ +  +++ +   +  + +      +  D +R  +   yGG+ iD 
  EPX73857.1  56 EYSTASQSRIPKIIHQIWKD--ENIPEKWSGSVSSCRAQHpeeDGWTINLWTDEKVLSFMETHYSWFMPIYNSYPYDIQRFDAVRYFIVYHYGGIYIDL 152
                 45555666667778888887..77788777777777777766667888888888888888888777777766666666666****************** PP

  Caps_synth 133 TifltkklpsellkkdfftfkssekksnkislssWtsfflaakkn...npllsllkdllleYwkkensl 198
                  + ++k+++  l ++ f  +     ++     + W   f a  k+   +++++ l+++ ++Y+ k+ ++
  EPX73857.1 153 DVGCKKPMDPLLDQTTFL-L---PVTEPIGYSNDW---FAATPKHdflYKVITSLSKFNHQYFTKYPTV 214
                 *******99887555555.5...444555666788...5555544122688899999999999998876 PP

>> COX14  Cytochrome oxidase c assembly
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.3   4.5e-05     0.045      16      58 ..     278     316 ..     276     317 .. 0.93

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 4.5e-05
       COX14  16 ltVltLiGvTlyaggllvytvysygkynrkqkaeliereklke 58 
                 l V tLi  ++   +  +++++   ++nr q++    r++++e
  EPX73857.1 278 LYVITLITICILVLVFVFVKFVTVRRKNRSQRR----RQMQQE 316
                 6799*****************************....999998 PP

>> Cadherin_C_2  Cadherin cytoplasmic C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.0     0.022        22       6      30 ..       9      38 ..       7      96 .. 0.60
   2 ?    7.2   0.4    0.0086       8.6       7      37 ..     280     310 ..     276     319 .] 0.66

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.022
  Cadherin_C_2  6 LviaLasvSflFLltvivlvavrl.....r 30
                  L+ia+++  f+F+l  ++l   +       
    EPX73857.1  9 LTIAVSFLVFIFILLKVLLYFQKYlyllpT 38
                  455555555555555554444443444331 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0086
  Cadherin_C_2   7 viaLasvSflFLltvivlvavrlrkerksaa 37 
                   vi L ++ +l L++v+v  +   rk+r+++ 
    EPX73857.1 280 VITLITICILVLVFVFVKFVTVRRKNRSQRR 310
                   899***********99974443333333332 PP

>> Sigma_reg_N  Sigma factor regulator N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.4   0.00083      0.83       3      46 ..       1      44 [.       1      64 [. 0.80
   2 ?    6.4   0.4     0.011        11      19      49 ..     279     313 ..     271     318 .. 0.43

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00083
  Sigma_reg_N  3 ilkkakrksilrivlislivlllifvilvvtllylaekegnklr 46
                 +++++++ +++ ++++++i++ll +++ +  +lyl++ ++ ++ 
   EPX73857.1  1 MVRRTRKLLTIAVSFLVFIFILLKVLLYFQKYLYLLPTKQARTL 44
                 58999999999999999999999999999999999777666655 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.011
  Sigma_reg_N  19 slivlllifvil.vvtllyl...aekegnklrevl 49 
                   +i+l++i ++  v+ + ++   + k+ ++ r+++
   EPX73857.1 279 YVITLITICILVlVFVFVKFvtvRRKNRSQRRRQM 313
                  33333333333333333333333555554444444 PP

>> COX2_TM  Cytochrome C oxidase subunit II, transmembrane domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.6       1.5   1.5e+03      31      49 ..      12      29 ..       5      46 .. 0.56
   2 ?   12.6   0.2   0.00012      0.12      21      57 ..     271     308 ..     263     317 .. 0.63

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 1.5
     COX2_TM 31 ltlililVlyilvlilvef 49
                ++  l++ ++il+++l+ f
  EPX73857.1 12 AVSFLVF-IFILLKVLLYF 29
                2222222.33444444444 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 0.00012
     COX2_TM  21 eelhdyilliltlililVlyilvlilvefr..rrknkit 57 
                  +++++il+++tli+i +l  lv + v+f   rrkn   
  EPX73857.1 271 FWMQNHILYVITLITICILV-LVFVFVKFVtvRRKNRSQ 308
                 6899********99987654.444444443114444433 PP

>> PIRT  Phosphoinositide-interacting protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0     0.047        47      64      95 ..     195     227 ..     189     232 .. 0.77
   2 ?    6.1   0.2    0.0078       7.8      90     124 ..     283     317 ..     267     319 .] 0.83

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.047
        PIRT  64 vvittlsr.nstlknkdkevfklsGpaflslGl 95 
                  vit+ls+ n+   +k  +vf  +Gp f+s+ l
  EPX73857.1 195 KVITSLSKfNHQYFTKYPTVFLSTGPLFFSIIL 227
                 478999752677778888999999******976 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0078
        PIRT  90 flslGlmllvcGlvwvpiikkkrkqrqkslflqsl 124
                 ++++ +++lv+ +v    +++k++ ++++++ q+l
  EPX73857.1 283 LITICILVLVFVFVKFVTVRRKNRSQRRRQMQQEL 317
                 56788999999999888999999988899988876 PP

>> Ninjurin  Ninjurin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.1      0.79   7.9e+02      42      57 ..      12      27 ..       3      58 .. 0.64
   2 ?   10.3   0.4   0.00051      0.51      41      76 ..     278     312 ..     269     318 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.79
    Ninjurin 42 allvLislSllLqvvv 57
                a   L+ + +lL+v++
  EPX73857.1 12 AVSFLVFIFILLKVLL 27
                3333444444444443 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00051
    Ninjurin  41 iallvLislSllLqvvvgilliliasklnlekekke 76 
                 +  ++Li++++l+ v+v + ++ + +++n  +++++
  EPX73857.1 278 LYVITLITICILVLVFVFVKFVTV-RRKNRSQRRRQ 312
                 5679******************95.46666555543 PP

>> EphA2_TM  Ephrin type-A receptor 2 transmembrane domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0       1.4   1.4e+03       8      23 ..      12      27 ..       8      65 .. 0.61
   2 ?   10.7   1.2   0.00074      0.74       3      34 ..     281     312 ..     277     318 .. 0.56

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 1.4
    EphA2_TM  8 glvllvilvilvlvlv 23
                ++ +lv + il  vl+
  EPX73857.1 12 AVSFLVFIFILLKVLL 27
                3333333333333322 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00074
    EphA2_TM   3 aaavaglvllvilvilvlvlvrrrsknrkqks 34 
                 +++++ ++l++++v + +v vrr+++++++++
  EPX73857.1 281 ITLITICILVLVFVFVKFVTVRRKNRSQRRRQ 312
                 34555566666666666666655555554443 PP

>> DUF4834  Domain of unknown function (DUF4834)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.1      0.43   4.2e+02       9      24 ..      13      28 ..       7      80 .. 0.62
   2 ?    8.6   1.2    0.0038       3.8       2      40 ..     276     314 ..     275     318 .. 0.65

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.43
     DUF4834  9 ifiiailviglsilsv 24
                + +++ ++i l +l  
  EPX73857.1 13 VSFLVFIFILLKVLLY 28
                4444444444444433 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0038
     DUF4834   2 hfLlfilifiiailviglsilsvilrtvfglgsrkkssk 40 
                 h+L +i+++ i+ilv++++++ ++  +    ++r+++++
  EPX73857.1 276 HILYVITLITICILVLVFVFVKFVTVRRKNRSQRRRQMQ 314
                 789999888888888888888887766633344444332 PP

>> DUF3671  Protein of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   1.9      0.43   4.3e+02      96     114 ..      10      28 ..       5      30 .. 0.82
   2 ?   12.4   1.2   0.00012      0.12      34     112 ..     201     299 ..     193     300 .. 0.83

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.43
     DUF3671  96 lvviillvliYiliKviKY 114
                 ++ +  lv+i+il+Kv+ Y
  EPX73857.1  10 TIAVSFLVFIFILLKVLLY 28 
                 5678889999999999866 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 0.00012
     DUF3671  34 kkfkkkvlkkyglllilpvllpliglivpilfeaksk......................kslkkkelevlatsieklytiffiilvviillvliYiliK 110
                 +kf+   + ky  ++++   l+   +++  l e ++k                      +s + ++  + a+   + + +++i l++i +lvl+++++K
  EPX73857.1 201 SKFNHQYFTKYPTVFLSTGPLFFSIILCQYLSEPHNKvrslppdmyangpvsffshvhgSSWHGSD--ASAYFWMQNHILYVITLITICILVLVFVFVK 297
                 689999999999999999999988888888877777799999999999999999777544444444..6668888999999999*************** PP

     DUF3671 111 vi 112
                 ++
  EPX73857.1 298 FV 299
                 97 PP

>> HemY_N  HemY protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.4     0.099        99      16      47 ..       9      40 ..       5      50 .. 0.78
   2 ?    7.6   0.6    0.0042       4.2      17      63 ..     272     317 ..     261     318 .. 0.63

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.099
      HemY_N 16 lvvavlllvllfvllylllrllrlllrlparv 47
                l+ av +lv +f+ll +ll + + l+ lp++ 
  EPX73857.1  9 LTIAVSFLVFIFILLKVLLYFQKYLYLLPTKQ 40
                56788888888888888888888888887765 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0042
      HemY_N  17 vvavlllvllfvllylllrllrlllrlparvrrwrrrrrerkareal 63 
                 ++   +l ++ ++ +++l l+  ++++   vrr  r +r+r++++ l
  EPX73857.1 272 WMQNHILYVITLITICILVLVFVFVKF-VTVRRKNRSQRRRQMQQEL 317
                 555556666666666666666666666.4577777888888888876 PP

>> Tmemb_9  TMEM9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.1     0.015        15      46     107 ..       4      63 ..       1      92 [. 0.52
   2 ?    3.5   1.3      0.06        60      49      81 ..     277     309 ..     270     318 .. 0.55

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.015
     Tmemb_9  46 ntttikvvviivivvislLviYmlflllldpllnkrkkkasyqehtneedetseslssasqs 107
                  t  +  + + ++v i++L+  +l++    +ll  +++++ y  +++ e +  +++s+asqs
  EPX73857.1   4 RTRKLLTIAVSFLVFIFILLKVLLYFQKYLYLLPTKQARTLYLGQHDIEAS--SEYSTASQS 63 
                 444444444455555666666666666666777766666666666555433..345555554 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.06
     Tmemb_9  49 tikvvviivivvislLviYmlflllldpllnkr 81 
                 ++ v+ +i i+++ l  +++ f+++     ++r
  EPX73857.1 277 ILYVITLITICILVLVFVFVKFVTVRRKNRSQR 309
                 555666666666666666666666544433333 PP

>> Baculo_11_kDa  Baculovirus 11 kDa family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.5     0.037        37      37      57 ..       9      29 ..       1      43 [. 0.78
   2 ?    7.5   2.9     0.003       2.9      34      76 ..     274     316 ..     270     318 .. 0.70

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.037
  Baculo_11_kDa 37 vLvicglvvfvvivlfilLlv 57
                   + +  +++vf+ i+l +lL +
     EPX73857.1  9 LTIAVSFLVFIFILLKVLLYF 29
                   44667999**99999888755 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.003
  Baculo_11_kDa  34 rdFvLvicglvvfvvivlfilLlvvilknaeaeeaekekrekt 76 
                    ++++L + +l+ + ++vl ++++  ++   ++++++++++++ 
     EPX73857.1 274 QNHILYVITLITICILVLVFVFVKFVTVRRKNRSQRRRQMQQE 316
                    6677777777777777777777777777777777777777765 PP

>> DUF4271  Domain of unknown function (DUF4271)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   5.7     0.028        28     152     188 ..      10      46 ..       6      46 .. 0.91
   2 ?    6.0   0.5      0.01        10     110     152 ..     195     237 ..     192     240 .. 0.89
   3 ?    7.1   2.3    0.0046       4.6     145     182 ..     269     306 ..     267     309 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.028
     DUF4271 152 qillililiillliklllllyksirifkrkkfsllYl 188
                 +i++ ++++i++l+k+ll++ k++ ++  k+   lYl
  EPX73857.1  10 TIAVSFLVFIFILLKVLLYFQKYLYLLPTKQARTLYL 46 
                 6789999********************9999999996 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.01
     DUF4271 110 gwlFfdkkkirqwifsylsylsllglllfplvlllvyfplssq 152
                   +++++k++ q++ +y ++++  g l+f ++l+ ++++++++
  EPX73857.1 195 KVITSLSKFNHQYFTKYPTVFLSTGPLFFSIILCQYLSEPHNK 237
                 568999*************************999999988876 PP

  == domain 3  score: 7.1 bits;  conditional E-value: 0.0046
     DUF4271 145 vyfplssqillililiillliklllllyksirifkrkk 182
                 +yf ++++il++++li ++++ l+++++k++++  +++
  EPX73857.1 269 AYFWMQNHILYVITLITICILVLVFVFVKFVTVRRKNR 306
                 79999999999999997777777777999999988776 PP

>> DUF4492  Domain of unknown function (DUF4492)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   1.5     0.012        11      17      45 ..       5      34 ..       1      49 [. 0.76
   2 ?    5.6   0.8     0.015        15      19      62 ..     277     317 ..     274     318 .. 0.68

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.012
     DUF4492 17 GktLwliiliKLfiifvvLklff.fpdvLk 45
                 ++L +i +  L+ if++Lk+++ f+++L 
  EPX73857.1  5 TRKLLTIAVSFLVFIFILLKVLLyFQKYLY 34
                58999999999*********9763677775 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.015
     DUF4492  19 tLwliiliKLfiifvvLklfffpdvLkekakteeekseyVleeL 62 
                 +L++i li + i+++v   f+f +++  + k+ +++ +  ++eL
  EPX73857.1 277 ILYVITLITICILVLV---FVFVKFVTVRRKNRSQRRRQMQQEL 317
                 4666666666666655...6777777777777777777777776 PP

>> DUF1180  Protein of unknown function (DUF1180)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.5       4.8   4.7e+03      93     117 ..       5      29 ..       1      36 [. 0.73
   2 ?   11.3   0.6   0.00034      0.34     103     134 ..     278     311 ..     264     318 .. 0.77

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 4.8
     DUF1180  93 tdkpmtlqrallvlvvvsaavivyl 117
                 t+k+ t++  +lv + +   v++y+
  EPX73857.1   5 TRKLLTIAVSFLVFIFILLKVLLYF 29 
                 5677777777777777777777776 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 0.00034
     DUF1180 103 llv..lvvvsaavivylvvRtvrlrrrnrktRrY 134
                 l+v  l+ +  +v+v+  v+ v +rr+nr +Rr 
  EPX73857.1 278 LYVitLITICILVLVFVFVKFVTVRRKNRSQRRR 311
                 5551155666677888889*************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (319 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1292  (0.072062); expected 358.6 (0.02)
Passed bias filter:                      750  (0.0418317); expected 358.6 (0.02)
Passed Vit filter:                       107  (0.00596798); expected 17.9 (0.001)
Passed Fwd filter:                        24  (0.00133861); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 2210.77
//
Query:       EPX73858.1  [L=76]
Description: U6 snRNP-associated protein Lsm6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-19   69.4   0.1    1.8e-19   69.2   0.1    1.0  1  LSM       LSM domain
    5.4e-06   26.4   0.0    6.3e-06   26.3   0.0    1.1  1  SM-ATX    Ataxin 2 SM domain
  ------ inclusion threshold ------
      0.043   13.9   0.0      0.047   13.8   0.0    1.1  1  LSM14     Scd6-like Sm domain
       0.12   12.0   0.0       0.16   11.6   0.0    1.3  1  Hfq       Hfq protein


Domain annotation for each model (and alignments):
>> LSM  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.2   0.1   3.9e-23   1.8e-19       1      66 [.       7      71 ..       7      72 .. 0.98

  Alignments for each domain:
  == domain 1  score: 69.2 bits;  conditional E-value: 3.9e-23
                HHHHHTTTSEEEEEETTSEEEEEEEEEEETTSEEEEEEEEEEETTETEEEEEEEEEEEGGGEEEEE CS
         LSM  1 kflkklinkkvtvelkngrelrGtLkgfDqfmNlvLedveetlkdkkekrklglvliRGnnivlis 66
                +fl+k i+k v+++l +g  +rG+L + D +mNl Le++ee++++k +++ +g+ +iRGnn++++s
  EPX73858.1  7 DFLNKVIGKPVVIRLSSGVDYRGILSCLDGYMNLALEQTEEFVNGK-KTNEYGDAFIRGNNVLYVS 71
                59********************************************.*****************97 PP

>> SM-ATX  Ataxin 2 SM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.3   0.0   1.4e-09   6.3e-06       8      61 ..       9      58 ..       7      71 .. 0.86

  Alignments for each domain:
  == domain 1  score: 26.3 bits;  conditional E-value: 1.4e-09
                HHTTTTSEEEEEETTS-EEEEEEEEE-T..T--EEEEEEEETTS.......... CS
      SM-ATX  8 ltslvGkevevtvknGevyeGifstvslekdfsvvLkmarkvkkanskssspss 61
                l++++Gk+v +++++G  y+Gi+s+++    ++++L+ + +  +  +k+++++ 
  EPX73858.1  9 LNKVIGKPVVIRLSSGVDYRGILSCLDG--YMNLALEQTEEFVN--GKKTNEYG 58
                789************************9..99999999999888..55555555 PP

>> LSM14  Scd6-like Sm domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   1.1e-05     0.047       2      39 ..      12      48 ..      11      72 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1.1e-05
       LSM14  2 fIGskislisksdirYeGilceinledstiaLqnvrsf 39
                +IG+ + +   s++ Y Gil+ ++    ++aL++   f
  EPX73858.1 12 VIGKPVVIRLSSGVDYRGILSCLD-GYMNLALEQTEEF 48
                7***********************.7888999986655 PP

>> Hfq  Hfq protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   3.5e-05      0.16      14      39 ..      15      40 ..       6      53 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 3.5e-05
                -EEEEEETTS-EEEEEEEEE-SSEEE CS
         Hfq 14 ipvtifLvnGiklkGviksfDnftvl 39
                 pv+i L++G+  +G+++  D ++ l
  EPX73858.1 15 KPVVIRLSSGVDYRGILSCLDGYMNL 40
                59*********************844 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       287  (0.0160076); expected 358.6 (0.02)
Passed bias filter:                      252  (0.0140554); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.42
# Mc/sec: 548.48
//
Query:       EPX73859.1  [L=220]
Description: ribonuclease MRP complex subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00035   20.3   0.5       0.45   10.1   0.3    2.3  2  DUF4477   Domain of unknown function (DUF4477)


Domain annotation for each model (and alignments):
>> DUF4477  Domain of unknown function (DUF4477)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.3   2.5e-05      0.45      47      83 ..       4      40 ..       1      45 [. 0.90
   2 !    8.3   0.0   8.8e-05       1.6     136     175 ..      51      90 ..      41      97 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 2.5e-05
     DUF4477 47 leteaallsrllyrlknkfrnhkgfralkkveqaLkr 83
                l+ ea +l++++yr+kn++r    +r++ ++++ L++
  EPX73859.1  4 LKPEAVVLQKIVYRNKNQHRLTLWWRHVIMLHRRLRQ 40
                77899************************99999986 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 8.8e-05
     DUF4477 136 rildlckkafllsvkhlrlgefiklntvllallsrlwvls 175
                  +l  c k   l+++ +  g++  l  +ll++lsr+w + 
  EPX73859.1  51 LLLRQCPKSYALFTNLIAHGQYPGLGCLLLGILSRVWYVL 90 
                 56789999*****************************876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1228  (0.0684924); expected 358.6 (0.02)
Passed bias filter:                      538  (0.0300073); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 1588.79
//
Query:       EPX73860.1  [L=539]
Description: MatE family transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.9e-56  190.2  25.1    1.2e-31  109.5   8.6    2.5  2  MatE             MatE
    3.3e-05   24.0  30.5     0.0021   18.1   5.8    3.2  3  Polysacc_synt_C  Polysaccharide biosynthesis C-terminal domai


Domain annotation for each model (and alignments):
>> MatE  MatE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.5   8.6   1.4e-35   1.2e-31       1     161 []     106     266 ..     106     266 .. 0.99
   2 !   86.1   8.5   2.3e-28     2e-24       4     158 ..     331     486 ..     330     489 .. 0.97

  Alignments for each domain:
  == domain 1  score: 109.5 bits;  conditional E-value: 1.4e-35
        MatE   1 PialenllesllslidtllvgrlgskalAavsialsilsllfv.fllglstalttlvgqalGaknfkrakealrqglilllllsliiallvllfseqil 98 
                 P+++++l++s+ ++ +++ +g+lg++ lAa s++++++ ++ +  + g+ ++l+tl++qa+Ga+++ +++++++++ ++llll ++i+++ +l+ e il
  EPX73860.1 106 PTVFAYLFQSSEQFSTVFSLGHLGKEYLAASSLSTMTAAITAFsMFQGIISSLDTLATQAFGANKPYNVSVYFQRCCFILLLLHIPISII-WLNLESIL 203
                 99***************************************99999********************************************.******** PP

        MatE  99 slftqdeevlelakrylrililgipalalqlvlsgilrgagktkvplyislislllniplnyl 161
                  ++ qd+ v++l  ry+++ i+ +p++a ++v +++l+++g++k+++ ++ ++++ln++lnyl
  EPX73860.1 204 VFLRQDPVVAHLCGRYMKVFIFAAPGYASFEVMKRYLQAQGIFKPITCVLCFAAPLNMLLNYL 266
                 **************************************************************7 PP

  == domain 2  score: 86.1 bits;  conditional E-value: 2.3e-28
        MatE   4 lenllesllslidtllvgrlgskalAavsialsilsllfvfllglstalttlvgqalGaknfkrakealrqglilllllsliiallvllfseqilslft 102
                 l+ ++e+  +  ++l +g+lg+ +lA+ s+ l+++sl f +++++++a +t+vg+ +G+++++ a+   r++++l++++s+   l+++ f++++ ++ft
  EPX73860.1 331 LMIVTEWAAYEMTSLGAGYLGTASLASQSVLLTTTSLAFQIPFAFAVASSTRVGHLVGSGRPNLARICSRVATCLAIIVSVTDGLFLFSFRNHWGHYFT 429
                 67889999999**************************************************************************************** PP

        MatE 103 qdeevlelakrylrililgipalalqlvlsgilrgagktkvplyislisl.llnipl 158
                 +d+evl l+++  +il+l+i++++l+ v  g lrg+gk+ ++ +is++++  + +p 
  EPX73860.1 430 SDKEVLGLVQQVFPILCLFIVFDSLNAVGGGLLRGIGKQSIGGVISVACNyCIALPA 486
                 *************************************************98887775 PP

>> Polysacc_synt_C  Polysaccharide biosynthesis C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.3      0.45     4e+03      13      13 ..     157     157 ..     122     205 .. 0.60
   2 !   17.9   8.8   2.7e-07    0.0024       2     111 ..     220     337 ..     219     377 .. 0.75
   3 !   18.1   5.8   2.4e-07    0.0021       1      85 [.     441     528 ..     441     539 .] 0.84

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.45
  Polysacc_synt_C  13 s 13 
                      s
       EPX73860.1 157 S 157
                      2 PP

  == domain 2  score: 17.9 bits;  conditional E-value: 2.7e-07
  Polysacc_synt_C   2 LailalsiiflslstvlssiLqglgrqkialkalvigalvklilnllli..p..lfgivGaaiatvlallvvavlnlyalrrllgikl...... 85 
                      + +++++++ ++ + v+  +Lq+ g  k ++ +l ++a ++++ln+ll+  p   fg +Ga  a ++++ v ++ ++ ++r    + +      
       EPX73860.1 220 MKVFIFAAPGYASFEVMKRYLQAQGIFKPITCVLCFAAPLNMLLNYLLVwhPkiGFGFLGAPTAVAITFWVQSISLMTYARFSSSVIPwtnfsk 313
                      7899999999***************************************885225578***************999999998777777674443 PP

  Polysacc_synt_C  86 ellrrll...kpllaalvmgivvylllll 111
                            l   kp+l   + g++++ ++ +
       EPX73860.1 314 R----ALqnfKPMLTLSFHGMLMI-VTEW 337
                      1....3233355555555555533.3333 PP

  == domain 3  score: 18.1 bits;  conditional E-value: 2.4e-07
  Polysacc_synt_C   1 vLailalsiiflslstvlssiLqglgrqkia.lkalvigalvklilnllli..plfgivGaaiatvlallvvavlnlyalrrllgikl 85 
                      v+ il+l i+f sl+ v++++L g+g+q i  ++++++  ++ l   l+++   ++g+ G+ +++++a ++++ +++  l ++  +k+
       EPX73860.1 441 VFPILCLFIVFDSLNAVGGGLLRGIGKQSIGgVISVACNYCIALPAALVFVnvFHLGLKGIWMGMIVAVTTGITCQYTVLAHISWHKV 528
                      5789*************************973666667778888888888866788********************999999888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (539 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       671  (0.0374254); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 3861.81
//
Query:       EPX73861.1  [L=514]
Description: NEDD8 activating enzyme [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      9e-21   74.3   0.0    3.2e-16   59.4   0.0    2.1  2  ThiF      ThiF family
  ------ inclusion threshold ------
      0.022   14.6   0.1      0.062   13.2   0.1    1.7  1  DUF2706   Protein of unknown function (DUF2706)


Domain annotation for each model (and alignments):
>> ThiF  ThiF family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.4   0.0   3.6e-20   3.2e-16       1     157 [.      10     167 ..      10     359 .. 0.90
   2 !   13.5   0.0   3.8e-06     0.034     142     231 ..     416     511 ..     365     514 .] 0.78

  Alignments for each domain:
  == domain 1  score: 59.4 bits;  conditional E-value: 3.6e-20
                 THHHHHHHHHHHHHHHHTSEEEEE--SHHHHHHHHHHHHHTTTEEEEEESSB--GGGGGTBTTS-GGGTTSBHHHHHHHHHHHT-TTSEEEEEES-CCG CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        ThiF   1 ysrqlallgedgqekLrdskvllvGaGglGsellknLalsGvgkltlvDnDkielsNlnRqflfreediGkpKaevaaealqeinpdveveavteritd 99 
                 y+rq+++++ +gq ++++s+++l+ a ++G+e+lkn +l G++++t+vD   + l+     f  + ++ G+++a +  + lq++np++e + ++ + ++
  EPX73861.1  10 YDRQVRIWKAEGQYAIEQSHICLLNANTVGCEALKNTILPGIREFTVVDKSLVNLKRDGSNFFVQYDQEGQSRALCTSTLLQQLNPSAEMNYLEVEPEE 108
                 899*988888********************************************999999***************************999988776666 PP

                 .CCS-HHHHTT-SEEEEESSSHHHHHHHHHHHHHHT-EEEEEEEETTEEEEEEEEECCS CS
                 .xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        ThiF 100 .etvleellesvDlVvdalDniearrlvnracvkkgiplieagtlgfegqvvviipgkt 157
                   +   e+++++ +++  + + +a + +  + + kgipli  +  gf g ++v +p+ t
  EPX73861.1 109 lIEKDIEFFSRFTIIFASTIKTDALLQLEAFLRTKGIPLIYYNSIGFAGIIRVSLPEYT 167
                 5443459********************************************99987443 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 3.8e-06
                 EETTEEEEEEEEECCS-ECTSS-T.....GGS.EECCCCEEHHHHHHCT..E-B-HHHHHHHHHHHHHHHHHHHTTBCGGGCCEEEECCTTTTEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        ThiF 142 tlgfegqvvviipgktgcyeCldp.....sstedptekkvplctsiagn..ipaiatttavvaglaalellkllsgkeklenslltqvdllesrfen 231
                  + f+++  + +++++++ +C+        s + + ++kv  c +  ++     i ++ ++++g+aa+e++k+l ++    n +   +d+ +s++e+
  EPX73861.1 416 EQLFSCHPHASLEKESPIVKCELNnlfekYSLKEKYKEKVLECIEELSRasGLEIHPVSSLIGGIAAQEAIKILTKHYLPINHTC-IFDGVHSKTET 511
                 556777777777799999***98566666677778888888884444445555599******************77766666655.66666666655 PP

>> DUF2706  Protein of unknown function (DUF2706)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   6.9e-06     0.062       7      37 ..     408     438 ..     403     442 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 6.9e-06
     DUF2706   7 fllvfiilaqllsctPsaPyeiksPcvsvdi 37 
                 + l f i  ql+sc P a  e  sP v  ++
  EPX73861.1 408 WYLAFRISEQLFSCHPHASLEKESPIVKCEL 438
                 6799**********************98766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (514 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       626  (0.0349155); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 3442.02
//
Query:       EPX73862.1  [L=485]
Description: ATPase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      1e-36  126.5   0.0    1.5e-18   67.6   0.0    2.4  2  ABC_tran      ABC transporter
      3e-08   33.8  11.2     0.0029   17.5   0.1    4.1  4  AAA_21        AAA domain, putative AbiEii toxin, Type IV TA s
    7.4e-07   28.8   0.2      0.017   14.8   0.1    2.6  2  AAA_29        P-loop containing region of AAA domain
    0.00011   21.7   0.5        1.4    8.3   0.0    3.5  3  SMC_N         RecF/RecN/SMC N terminal domain
    0.00016   22.0   0.7       0.55   10.5   0.0    3.3  2  AAA_22        AAA domain
    0.00033   20.8   0.0       0.73   10.1   0.0    2.6  2  SbcCD_C       Putative exonuclease SbcCD, C subunit
     0.0029   17.5   0.5        2.9    7.8   0.0    3.5  3  NACHT         NACHT domain
     0.0035   16.6   0.1       0.27   10.3   0.0    2.2  2  G-alpha       G-protein alpha subunit
     0.0069   16.9   0.0       0.42   11.1   0.1    2.4  2  AAA_23        AAA domain
  ------ inclusion threshold ------
      0.011   16.2   0.3        5.5    7.3   0.1    2.8  2  AAA_16        AAA ATPase domain
      0.012   15.2   0.4        1.3    8.6   0.0    2.4  2  cobW          CobW/HypB/UreG, nucleotide-binding domain
      0.022   13.8   0.0       0.96    8.5   0.0    2.2  2  T2SSE         Type II/IV secretion system protein
      0.023   14.7   0.0        9.2    6.3   0.0    2.6  2  TsaE          Threonylcarbamoyl adenosine biosynthesis protei
       0.15   11.4   0.0        1.5    8.2   0.0    2.1  2  FtsK_SpoIIIE  FtsK/SpoIIIE family
       0.17   11.3   0.0          2    7.8   0.0    2.1  2  Pox_A32       Poxvirus A32 protein


Domain annotation for each model (and alignments):
>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.6   0.0   3.2e-18   3.9e-15       1     136 [.      20     176 ..      20     177 .. 0.67
   2 !   67.6   0.0   1.3e-21   1.5e-18       1     136 [.     278     431 ..     278     432 .. 0.92

  Alignments for each domain:
  == domain 1  score: 56.6 bits;  conditional E-value: 3.2e-18
                 EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH.................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.................... RF
    ABC_tran   1 lknvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren.................... 79 
                 lk++s+++ +++ +a+vG  G+G +t+lk+l g ++p   +  ++   l+   ++++++     +q + l++     e+                    
  EPX73862.1  20 LKDISFEIARNQNWAVVGAVGSGRTTFLKCLQGSYTPSPATS-FNYPFLSGSGISRWQAIQFLDFQSSGLQRAAYYSERyhshreeredttllkwltda 117
                 79***********************************77775.44333333444444444444455555665555555555554344445555555554 PP

                 ...HHHTCHHHHHHHSTTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTT CS
                 ...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  80 ...esdeeiekalsklglkelkdtvvksspssLSgGqkqrvalarallkkpkllllDEpt 136
                     +++ +e+++   +++   +  ++ss  +LS Gq +r +la+ ll +p+llllDEp 
  EPX73862.1 118 hrgSEEKALENVRYAASITR-LEPLLNSSLINLSNGQSRRAMLAAKLLLQPQLLLLDEPY 176
                 44322222333333333333.4455555559****************************6 PP

  == domain 2  score: 67.6 bits;  conditional E-value: 1.3e-21
                 EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--.SEEEEEETTCEGGG...B-HHHCCHCEEEE-SS..--S-TTSBHHHH.............. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxx...xxxxxxxxxxxxxxxx..xxxxxxxxxxxx.............. RF
    ABC_tran   1 lknvslklkegekvaivGenGaGKStLlkllagllkp.teGeilldgkdlke...qeleslrkeigvlpqe..pqlfpeltvren.............. 79 
                 l+n++++++ege++ + G+nG+GK+tLl+  +g + +  + +i++ gk++     ++    ++++g ++ e  +++ +e t+re+              
  EPX73862.1 278 LQNINWTIREGERWYLSGSNGSGKTTLLAFALGDHPKlFATDIKFFGKSIGPgtgISVIDIQENVGHCSPEihTHFPKEFTCRETllsawsttftipke 376
                 79***************************9999887668999********99999999999999999999986666777889999***********998 PP

                 ..HHHTCHHHHHHHSTTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTT CS
                 ..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  80 ..esdeeiekalsklglkelkdtvvksspssLSgGqkqrvalarallkkpkllllDEpt 136
                    +++ i+k+l++l++ ++++t++    s+L  G+++ +  +ra++k p+ll+lDEp+
  EPX73862.1 377 teSRSKTIAKILDELNIRKFENTPL----SQLPMGMQRFILFCRAIIKSPRLLVLDEPF 431
                 8666666******************....*****************************7 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0      0.19   2.3e+02       4      21 ..      35      52 ..      34      82 .. 0.76
   2 !   12.8   0.1   6.6e-05     0.079     236     282 ..     148     191 ..      72     208 .. 0.70
   3 !    6.3   1.4     0.006       7.2       6      17 ..     295     306 ..     293     344 .. 0.89
   4 !   17.5   0.1   2.4e-06    0.0029     172     297 ..     367     461 ..     334     465 .. 0.68

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.19
      AAA_21  4 liGpNgsGKSnLLdaldl 21
                ++G+ gsG +++L++l++
  EPX73862.1 35 VVGAVGSGRTTFLKCLQG 52
                89**************75 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 6.6e-05
      AAA_21 236 elSdGtkrllalltallralkkgsllliDEpEngLHPkllrrllell 282
                 +lS G+ r  a+l+a l + +   lll+DEp +gL+    + + ell
  EPX73862.1 148 NLSNGQSRR-AMLAAKLLLQP--QLLLLDEPYSGLDVVSRSVVSELL 191
                 359999999.55555555554..9************93333333666 PP

  == domain 3  score: 6.3 bits;  conditional E-value: 0.006
      AAA_21   6 GpNgsGKSnLLd 17 
                 G NgsGK++LL 
  EPX73862.1 295 GSNGSGKTTLLA 306
                 99********95 PP

  == domain 4  score: 17.5 bits;  conditional E-value: 2.4e-06
      AAA_21 172 fadyfgfakekrllqrlvrslklveielsdlgegeeliasvderlrergvvflengdgqelparelSdGtkrllalltallralkkgsllliDEpEngL 270
                 +  +f+ +ke + +++ + ++++                                 +  ++p+++l++G++r++ +  a++  +   +ll++DEp  g 
  EPX73862.1 367 WSTTFTIPKETESRSKTIAKILDEL----------------------------NIRKFENTPLSQLPMGMQRFILFCRAIIKSP---RLLVLDEPFQGV 434
                 4444444444444444444444443............................33444589************88888888777...************ PP

      AAA_21 271 HPkllrrllell.kelsrngaQv.iltTH 297
                 + + ++   ++l k+l    +Q  ++ +H
  EPX73862.1 435 DIEYMHLAHKWLnKNLLP--SQAmVIISH 461
                 999998877777444333..666555555 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   0.0   0.00016       0.2      16      55 ..      24      63 ..       9      65 .. 0.90
   2 !   14.8   0.1   1.4e-05     0.017      13      39 ..     279     305 ..     265     309 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00016
      AAA_29 16 tieidlkgatlltGpsGsGKSTllDAiqalLvpakkvrfN 55
                ++ei ++++  ++G+ GsG +T+l  +q   +p+  ++fN
  EPX73862.1 24 SFEIARNQNWAVVGAVGSGRTTFLKCLQGSYTPSPATSFN 63
                567887789***********************99999999 PP

  == domain 2  score: 14.8 bits;  conditional E-value: 1.4e-05
      AAA_29  13 dghtieidlkgatlltGpsGsGKSTll 39 
                 ++  ++i++ +   l+G +GsGK+Tll
  EPX73862.1 279 QNINWTIREGERWYLSGSNGSGKTTLL 305
                 44567777555999************8 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0       0.2   2.4e+02      24      44 ..      29      50 ..      16      55 .. 0.76
   2 !    8.3   0.0    0.0011       1.4     119     200 ..     134     209 ..      78     223 .. 0.73
   3 !    8.0   0.1    0.0015       1.8      29     132 ..     293     393 ..     279     483 .. 0.54

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.2
                SSEE.EEEESTTSSHHHHHHHH CS
                xxxx.xxxxxxxxxxxxxxxxx RF
       SMC_N 24 ksft.aivGpNGSGKsnlldAi 44
                ++ + a+vG+ GSG++ +l  +
  EPX73862.1 29 RNQNwAVVGAVGSGRTTFLKCL 50
                444338**********998765 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.0011
                 -HHHHHHHHHCTT-STTCS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTT.SEEEEE-SSHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxx RF
       SMC_N 119 tkkevsellesagiskelLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkekskn.aQfivislree 200
                 + + ++ ll+s+ i   +LS G+   ++la        +p+ l llDe  + LD   ++ v+ell + s+  +  iv slr++
  EPX73862.1 134 SITRLEPLLNSSLI---NLSNGQSRRAMLAAK---LLLQPQ-LLLLDEPYSGLDVVSRSVVSELLGNMSNAcSPKIVLSLRQQ 209
                 33666666666666...599999887766643...444554.889*********************99887578999999986 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.0015
                 EEESTTSSHHHHHHHHHHHCTT.TTTTTTCHCCCCCC--BTTCSSTTEEEEEEEEEETTEE.SSSSSSCEEEEEEEETTSEEEEEETTEEE-H.HHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxx RF
       SMC_N  29 ivGpNGSGKsnlldAilFvLGersakklrseklsdlihkskekasvkkaeveitfdnedkk.lkiekeevsisrrvkrkgeseykingkevtk.kevse 125
                 + G+NGSGK+ ll    F LG+ +  kl +++++   ++   +  ++  +++  + + + +  +   +e++ + ++ +  +++++i +++ ++ k +++
  EPX73862.1 293 LSGSNGSGKTTLL---AFALGD-HP-KLFATDIKFFGKSIGPGTGISVIDIQENVGHCSPEiHTHFPKEFTCRETLLSAWSTTFTIPKETESRsKTIAK 386
                 78********996...588994.33.4655555544443333333333333333322222212233344666666666666666664443333255566 PP

                 HHHCTT- CS
                 xxxxxxx RF
       SMC_N 126 llesagi 132
                 +l + +i
  EPX73862.1 387 ILDELNI 393
                 5555555 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.2    0.0037       4.4       9      32 ..      34      57 ..      28     210 .. 0.58
   2 !   10.5   0.0   0.00046      0.55       9      99 ..     292     429 ..     289     452 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0037
      AAA_22  9 vvtGesGtGKTtllrrlleqldee 32
                +v+G +G+G+Tt l+ l+ +++  
  EPX73862.1 34 AVVGAVGSGRTTFLKCLQGSYTPS 57
                79**************99988633 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00046
      AAA_22   9 vvtGesGtGKTtllrrlleqldeeakaee.....................................erpevv......fvtlpsst.sskdllrellra 63 
                 ++ G  G+GKTtll+  l  +++  + +                                       ++e++      ++t+p++t s+++   ++l +
  EPX73862.1 292 YLSGSNGSGKTTLLAFALGDHPKLFATDIkffgksigpgtgisvidiqenvghcspeihthfpkefTCRETLlsawstTFTIPKETeSRSKTIAKILDE 390
                 68899**********9999987655555599*****************99*999999999999999777777888999999999997777779999999 PP

      AAA_22  64 lglelkaerlsseellealeqalrarav....ielliiDE 99 
                 l+ ++ + +  +++l   +++ +  +++    ++ll++DE
  EPX73862.1 391 LNIRKFE-NTPLSQLPMGMQRFILFCRAiiksPRLLVLDE 429
                 9999999.77777777777777777777777999999999 PP

>> SbcCD_C  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.0    0.0025         3      63      88 ..     166     191 ..     143     193 .. 0.84
   2 !   10.1   0.0   0.00061      0.73      62      84 ..     420     442 ..     413     448 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0025
     SbcCD_C  63 alrlvfLDEAFsklDeesiatllell 88 
                 +++l++LDE +s+lD  s++ + ell
  EPX73862.1 166 QPQLLLLDEPYSGLDVVSRSVVSELL 191
                 589*************9999998887 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00061
     SbcCD_C  62 palrlvfLDEAFsklDeesiatl 84 
                 +++rl++LDE F+++D e+++ +
  EPX73862.1 420 KSPRLLVLDEPFQGVDIEYMHLA 442
                 589*************9987765 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.1     0.059        70       4      21 ..      34      51 ..      32     111 .. 0.81
   2 !    7.8   0.0    0.0024       2.9       4      18 ..     292     306 ..     289     309 .. 0.89
   3 ?    2.4   0.0      0.11   1.4e+02     107     136 ..     440     467 ..     420     483 .. 0.79

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.059
                EEEC-TTTCHHHHHHHHH CS
       NACHT  4 ilqGeaGsGKTtLlqkla 21
                ++ G+ GsG Tt+l+ l 
  EPX73862.1 34 AVVGAVGSGRTTFLKCLQ 51
                689***********9775 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0024
                 EEEC-TTTCHHHHHH CS
       NACHT   4 ilqGeaGsGKTtLlq 18 
                  l G +GsGKTtLl+
  EPX73862.1 292 YLSGSNGSGKTTLLA 306
                 589**********96 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.11
                 ..HHHHHCTTTTT--EEEEEEECCCHHHHC CS
       NACHT 107 tlLselirkkllpeasllltvrpralrdle 136
                 +l +++++k+llp+  ++++++ +    ++
  EPX73862.1 440 HLAHKWLNKNLLPSQAMVIISHYEEE--IP 467
                 67789************999986655..55 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.0   0.00023      0.27      23     140 ..      30     225 ..      18     245 .. 0.62
   2 ?    4.1   0.0     0.018        22      25      40 ..     290     305 ..     274     309 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00023
                 EEEEEEEESTTSSHHHHHHHHHHHCS--.........--HHHHHCCHHHHHHHHHHHHHHHHHHHHHTT.........................HHHC- CS
     G-alpha  23 evkllllGqseSGKsTilkqlkllykkg.........fseeelatwraviqlnivrsiktilealesleselsesf..................elqel 94 
                 + ++ ++G+ +SG++T+lk l+  y+++          s + +  w+a+ +l + +s  +  + +++  +++ e+                   +  e+
  EPX73862.1  30 NQNWAVVGAVGSGRTTFLKCLQGSYTPSpatsfnypfLSGSGISRWQAIQFLDFQSSGLQRAAYYSERYHSHREERedttllkwltdahrgseeKALEN 128
                 348899*******************99988888877655566677888888888777777777777765555555556666666666666666544555 PP

                 SS-SCCCS-HCHHHH................................................................HHCCHHC-HCHHHHHHHHCC CS
     G-alpha  95 kerldplkkveasliaklssateee......................................................qeiefnpraevgedikaLwn 139
                  + ++ +  +e+ l+++l + ++ +                                                      q++e+++   ++++i++L n
  EPX73862.1 129 VRYAASITRLEPLLNSSLINLSNGQsrramlaaklllqpqlllldepysgldvvsrsvvsellgnmsnacspkivlslrQQDEIPD---FVTHIVELKN 224
                 55555555555555555555554445555666555555555555555555555555555555555444444444444444444443...4445555555 PP

                 S CS
     G-alpha 140 d 140
                 +
  EPX73862.1 225 H 225
                 5 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.018
                 EEEEEESTTSSHHHHH CS
     G-alpha  25 kllllGqseSGKsTil 40 
                 +++l G+++SGK+T+l
  EPX73862.1 290 RWYLSGSNGSGKTTLL 305
                 799***********97 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0     0.072        86      23      40 ..      34      51 ..      16     144 .. 0.88
   2 !   11.1   0.1   0.00035      0.42      24      37 ..     293     306 ..     292     401 .. 0.91

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.072
      AAA_23 23 lItGpNGaGKTTildAik 40
                +++G  G+G TT+l +++
  EPX73862.1 34 AVVGAVGSGRTTFLKCLQ 51
                679999**********97 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.00035
      AAA_23  24 ItGpNGaGKTTild 37 
                 ++G NG+GKTT+l 
  EPX73862.1 293 LSGSNGSGKTTLLA 306
                 58**********96 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0     0.011        13      28      76 ..      34      78 ..      25     197 .. 0.62
   2 ?    7.3   0.1    0.0046       5.5      26      44 ..     290     308 ..     277     450 .. 0.80

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.011
      AAA_16 28 llsGesGvGKsslvrellralekd...........ggiflrgkcdqlesaipysalaqal 76
                 ++G+ G+G ++ +++l+ +++ +           g            s+i++   +qa+
  EPX73862.1 34 AVVGAVGSGRTTFLKCLQGSYTPSpatsfnypflsG------------SGISR---WQAI 78
                699***************999999444443333330............33332...2333 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0046
      AAA_16  26 lvllsGesGvGKsslvrel 44 
                   +lsG  G+GK++l+  +
  EPX73862.1 290 RWYLSGSNGSGKTTLLAFA 308
                 5679***********9654 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.1     0.024        29       5      19 ..      35      49 ..      32      55 .. 0.87
   2 ?    8.6   0.0     0.001       1.3       5      20 ..     293     308 ..     290     316 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.024
                EEESTTCCHHHHHHH CS
        cobW  5 ltGflGsGKTtLlnh 19
                ++G +GsG Tt+l+ 
  EPX73862.1 35 VVGAVGSGRTTFLKC 49
                89**********975 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.001
                 EEESTTCCHHHHHHHH CS
        cobW   5 ltGflGsGKTtLlnhl 20 
                 l+G+ GsGKTtLl   
  EPX73862.1 293 LSGSNGSGKTTLLAFA 308
                 89**********9765 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.037        44     125     148 ..      26      49 ..      11      56 .. 0.84
   2 ?    8.5   0.0    0.0008      0.96     118     151 ..     277     310 ..     226     317 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.037
       T2SSE 125 avrerglilvsGgTgsGKttllya 148
                  ++++++  v G+ gsG+tt+l  
  EPX73862.1  26 EIARNQNWAVVGAVGSGRTTFLKC 49 
                 56677888999**********976 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0008
       T2SSE 118 iaevlrkavrerglilvsGgTgsGKttllyallk 151
                 + + ++  +re     +sG  gsGKttll  +l 
  EPX73862.1 277 VLQNINWTIREGERWYLSGSNGSGKTTLLAFALG 310
                 55566666777777889************88775 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0     0.014        17      14      41 ..      27      52 ..      14      67 .. 0.76
   2 ?    6.3   0.0    0.0077       9.2      18      36 ..     281     305 ..     267     311 .. 0.73

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.014
                HHHCHTEEEEEEESTTSSHHHHHHHHHH CS
        TsaE 14 lakalgdvilLeGdLGaGKTtlvrglak 41
                +a+  ++ ++  G +G+G Tt+ + l  
  EPX73862.1 27 IAR--NQNWAVVGAVGSGRTTFLKCLQG 52
                444..6678999**********998755 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0077
                 H......TEEEEEEESTTSSHHHHH CS
        TsaE  18 l......gdvilLeGdLGaGKTtlv 36 
                 +      g+ ++L+G  G+GKTtl 
  EPX73862.1 281 InwtireGERWYLSGSNGSGKTTLL 305
                 33333446679************96 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.0    0.0012       1.5      33      59 ..      25      50 ..      14      55 .. 0.83
   2 ?    0.4   0.0      0.29   3.5e+02      45      56 ..     294     305 ..     279     307 .. 0.88

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0012
                  EEGGGS-.SEEEE--TTSSHHHHHHHH CS
  FtsK_SpoIIIE 33 ldlkkmashllvaGatgsGKStalntL 59
                  ++++ +  +  v+Ga gsG +t+l+ L
    EPX73862.1 25 FEIARNQ-NWAVVGAVGSGRTTFLKCL 50
                  5555666.99**************876 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.29
                   E--TTSSHHHHH CS
  FtsK_SpoIIIE  45 aGatgsGKStal 56 
                    G+ gsGK+t l
    EPX73862.1 294 SGSNGSGKTTLL 305
                   69********87 PP

>> Pox_A32  Poxvirus A32 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.0    0.0017         2      14      33 ..      31      50 ..      24      57 .. 0.87
   2 ?    0.7   0.0      0.25     3e+02      17      30 ..     292     305 ..     285     314 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0017
     Pox_A32 14 FrlalvGgsGsGktvyLlsL 33
                 + a+vG  GsG+t++L+ L
  EPX73862.1 31 QNWAVVGAVGSGRTTFLKCL 50
                5789*************987 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.25
     Pox_A32  17 alvGgsGsGktvyL 30 
                  l G  GsGkt+ L
  EPX73862.1 292 YLSGSNGSGKTTLL 305
                 57899******988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (485 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       476  (0.0265492); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        77  (0.00429472); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.63u 0.30s 00:00:00.93 Elapsed: 00:00:00.46
# Mc/sec: 3167.89
//
Query:       EPX73863.1  [L=228]
Description: prorein methyltransferase Mtq2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      7e-05   22.4   0.0     0.0041   16.7   0.0    2.2  2  MTS              Methyltransferase small domain
  ------ inclusion threshold ------
      0.013   16.2   0.0       0.07   13.9   0.0    2.0  2  Methyltransf_12  Methyltransferase domain


Domain annotation for each model (and alignments):
>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   4.5e-07    0.0041      35     108 ..      50     134 ..      22     148 .. 0.73
   2 !    3.7   0.0    0.0046        41     114     148 ..     157     191 ..     151     211 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 4.5e-07
                 EEEET-TTSHHHHHHHHHTTC.E..EE.EEESBHHHHHHHHHHHHHTTGC.......EEEEE-STTTTST.TS-EEEEEE---ST CS
         MTS  35 vlDlGcGaGvlgaalakespeae..vt.lvdvdarAlesakenleankle.......vevvasdvleeve.ekkfdlivsNPPfh 108
                  + +GcG G ++  +++   +++  ++ ++d++ +A ++a++ +++n+         + + ++  l+ +  +k++d+++ NPP+ 
  EPX73863.1  50 TAEIGCGSGCVSSFFKSGILQNRptIHfMTDISNAACNAATNVVNKNRELyndksgiLLTAQTYFLQGLRiKKSIDVLLFNPPYV 134
                 5789********998875444433344389********99998888875456777754444555667766679**********85 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.0046
                 HHHHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHH CS
         MTS 114 elavaeeliaeAkeaLkegGeLliVanrklgyesl 148
                   +v+++l+++  ++L+ +G +++Va    + e++
  EPX73863.1 157 GMDVTNQLLNNLSDILSADGVFYMVAVARNKPEKI 191
                 67899********************9776655554 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   7.8e-06      0.07       2      47 ..      52     100 ..      51     129 .. 0.83
   2 ?   -0.3   0.0      0.21   1.9e+03      81      99 .]     160     178 ..     151     178 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 7.8e-06
  Methyltransf_12   2 eiGcGtGsllrallekl..pdieyt.gvDispsaiedakeklakrennn 47 
                      eiGcG+G +++ +   +   + +++  +Dis +a+++a +  +k++++ 
       EPX73863.1  52 EIGCGSGCVSSFFKSGIlqNRPTIHfMTDISNAACNAATNVVNKNRELY 100
                      9*************9999977777779********88877777776554 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.21
  Methyltransf_12  81 direvldnirklLkpgGrl 99 
                       ++++l+n+ + L+ +G++
       EPX73863.1 160 VTNQLLNNLSDILSADGVF 178
                      5679999999999999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       447  (0.0249317); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1679.43
//
Query:       EPX73864.1  [L=465]
Description: hypothetical protein SOCG_03083 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.067   13.6   3.3       0.14   12.6   1.6    2.3  2  Telomere_reg-2  Telomere length regulation protein


Domain annotation for each model (and alignments):
>> Telomere_reg-2  Telomere length regulation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   1.6   7.6e-06      0.14      26     102 ..      98     176 ..      86     179 .. 0.89
   2 ?   -1.9   0.0      0.25   4.4e+03      22      52 ..     413     444 ..     403     451 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 7.6e-06
  Telomere_reg-2  26 saeeLirrkad.eveenaveLataLltledkf.dienfeelrlnalvallvatpekvaeylteeffsnqyslqqRidiL 102
                     +++ Li + ++  +e++ + L++ +++l+    ++++++++r    + ++v +  +  +y   ef s++ ++ q++++L
      EPX73864.1  98 VLSRLITHMSQkTLEDLLQRLLQLVIHLKSVSnSMSSVSRKRSTFFIFVIVLEAISLKQYAKIEFSSRDSKICQKMLLL 176
                     5678999877757778************766669******************************************998 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.25
  Telomere_reg-2  22 aaLksaeeLirrkadevee.naveLataLltl 52 
                     + L++ e Li++ ++e ++      a++L tl
      EPX73864.1 413 EFLQQFEVLIQNLPREYQDsTILLVAKQLSTL 444
                     56888999999999988884444445666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (465 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       749  (0.0417759); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 3272.02
//
Query:       EPX73865.1  [L=247]
Description: 20S proteasome component alpha 5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.3e-58  195.2   0.0    9.3e-58  194.9   0.0    1.1  1  Proteasome      Proteasome subunit
    7.3e-14   51.1   0.0    1.3e-13   50.3   0.0    1.4  1  Proteasome_A_N  Proteasome subunit A N-terminal signature


Domain annotation for each model (and alignments):
>> Proteasome  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  194.9   0.0     1e-61   9.3e-58       1     189 [.      31     220 ..      31     221 .. 0.95

  Alignments for each domain:
  == domain 1  score: 194.9 bits;  conditional E-value: 1e-61
                 HHHS-EEEEEEETTEEEEEEEEEEEETTEEEESSSSTSEEEEETTEEEEEEESHHHHHHHHHHHHHHHHHHHHHHSSGTCHHHHHHHHHHHHHHHHHHC CS
  Proteasome   1 vkkGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigvafaGlaaDartlvrraraeaqlyrlrygrpipverlvarvaaklqaytqrs 99 
                 +k G+t++G+k+kdgvvl+++kr++  s l+++ +veK+f+id +ig+a++Gl+aDart++++ar++aq++r++y++p  ve +++++++++++    +
  EPX73865.1  31 IKLGSTAIGVKSKDGVVLGVEKRLS--SPLMESYSVEKLFEIDTNIGCAISGLTADARTIIDHARVQAQNHRFTYDEPQGVESITQSICDLALRFGEGE 127
                 589**********************..*******************************************************************99855 PP

                 ......TTTTTSEEEEEEEEETTTEEEEEEEETTSEEEEESSEEEESTTHHHHHHHHHHHHSTTBSHHHHHHHHHHHHHHHHHHBTTSCSSEEEEE CS
  Proteasome 100 ......grrpfgvslliagvdeeggpeLyqidpsGsyieekdavaiGsgseaaktalekeykedltleeavelavkalkealerdklsgknievav 189
                         rpfgv+ll+ag+de+g p+Ly+ +psG+y+++  a aiGsgse+akt l key+ d+tl+ea+ l++k+l++++e +kl++ n+++a 
  EPX73865.1 128 edeeriMSRPFGVALLLAGIDEHG-PQLYHSEPSGTYFRY-GAKAIGSGSEPAKTELVKEYHNDMTLQEAEALILKVLRQVME-EKLNSMNVQLAS 220
                 45555578*************999.***************.5*****************************************.88******9985 PP

>> Proteasome_A_N  Proteasome subunit A N-terminal signature
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.3   0.0   1.4e-17   1.3e-13       1      23 []       8      30 ..       8      30 .. 0.99

  Alignments for each domain:
  == domain 1  score: 50.3 bits;  conditional E-value: 1.4e-17
  Proteasome_A_N  1 YDrslttFSPdGRLfQVEYAmkA 23
                    YDr ++tFSP+GRLfQVEYA++A
      EPX73865.1  8 YDRGVNTFSPEGRLFQVEYAIEA 30
                    **********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       614  (0.0342462); expected 358.6 (0.02)
Passed bias filter:                      497  (0.0277205); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 1719.78
//
Query:       EPX73866.1  [L=379]
Description: NADH kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-53  181.7   0.0    2.4e-53  181.3   0.0    1.1  1  NAD_kinase  ATP-NAD kinase
    0.00071   19.2   0.0     0.0012   18.4   0.0    1.3  1  DAGK_cat    Diacylglycerol kinase catalytic domain
  ------ inclusion threshold ------
      0.022   15.1   0.2       0.13   12.7   0.0    2.3  3  Toprim_3    Toprim domain


Domain annotation for each model (and alignments):
>> NAD_kinase  ATP-NAD kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  181.3   0.0   3.9e-57   2.4e-53      67     281 ..     133     341 ..      82     349 .. 0.85

  Alignments for each domain:
  == domain 1  score: 181.3 bits;  conditional E-value: 3.9e-57
                 EECCC-TTTTTSSSEEEEEE-HHHHHHHHHHHHH.CT-EEEEEESSS--SS-SEEGGGHHHHHHHHHHT-SEEEEEEEEEEEEEETTE......EEEEE CS
  NAD_kinase  67 trkaleafadagvdliivvGGDGTaldvarllqk.aeiPvlgvnaGvkgfltefepeaaaellekllegeirvekrevldavimrskgeediadivien 164
                 + +++    +++vd++i+vGGDGT+l +a+l++k   +Pvl++++G++gfl  f++++++++ ++++  +  v  r++l+ ++ r++         +++
  EPX73866.1 133 WDDEA--DLEKKVDIVITVGGDGTILHAASLFAKsGMPPVLSFSLGTLGFLLPFDISDFQSAFADMYYSRSYVLMRMRLSLTMKRNNY-------DETS 222
                 33333..34699*********************966799*****************************************77777766.......5899 PP

                 EESSEEEEEESSSSS-EEEEEEETTEEEEEEEESEEEEE-TGGGGTHHHHTT--EE-TT---EEEEEESESSS----EEE-TT-EEEEEE-..SS--EE CS
  NAD_kinase 165 svlnevviirgpgstlielelyvdtelleadqldglivstPtGstayslsaGgplisPgvlailivpicPhslssrpiVvssssklrirva..srseal 261
                  ++ne++i+rg  ++++ l++ +++++l++ ++dgli+stPtGstaysls Ggp+++P+++a+l++picP sls+rp+ +++s +++++ +  sr +  
  EPX73866.1 223 FIMNEMHIHRGLSPHMAVLKVFINDKFLTEAIADGLIISTPTGSTAYSLSSGGPIVHPSINALLLTPICPSSLSFRPVLFPDSFTISVETSekSRVRPQ 321
                 99***************************************************************************************9988888899 PP

                 EEETTTEEEEE-TT-EEEEE CS
  NAD_kinase 262 laldGseelelspgdevrvt 281
                 l +dG+       g++++++
  EPX73866.1 322 LSVDGRLLGLTDIGQRIHIC 341
                 99999887777777777776 PP

>> DAGK_cat  Diacylglycerol kinase catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0     2e-07    0.0012      16      92 ..      96     177 ..      84     181 .. 0.66

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 2e-07
                 HHHHHHCHHHHHHCTCEEEEEE--.STTHHHHH.....HHHHHHC.C-SEEEEEESHHHHHHHHHHHCTHHCTTSEEEEEE-SS CS
    DAGK_cat  16 ekllrkvrelleeagveleliete.epgdakel.....akeakee.gvdlivvaGGDGtvsevlnglleelatkpplgiiPlGt 92 
                 ++ + ++ e+l++a  +l+li  +  ++d  ++       ea+ e +vd+++ +GGDGt+  +++ +++  +  pp+  + lGt
  EPX73866.1  96 NQCFTRLVEHLQSAYSNLSLIVDKdTAEDFSQYklyswDDEADLEkKVDIVITVGGDGTILHAASLFAK--SGMPPVLSFSLGT 177
                 566667777777777777766655223332222211212223222488***************999999..7777777777777 PP

>> Toprim_3  Toprim domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   2.1e-05      0.13      27      87 ..      67     127 ..      64     132 .. 0.87
   2 ?   -2.0   0.0      0.83   4.9e+03       4      26 ..     250     271 ..     249     277 .. 0.79
   3 ?   -3.2   0.0       1.9   1.1e+04      69      88 ..     345     363 ..     342     365 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 2.1e-05
    Toprim_3  27 lsaanlkaiawpergkrvviaaD.nDaandGreaaeklaerleaagieavllep.aegeDwnd 87 
                  ++anlk+++wp+  ++v i+    D +    + + +l+e+l++a  +++l+++ +  eD+  
  EPX73866.1  67 GGKANLKQLQWPQSPRNVLILKKtMDLK--VNQCFTRLVEHLQSAYSNLSLIVDkDTAEDFSQ 127
                 589******************9999***..9*************9999999888444558765 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.83
    Toprim_3   4 ivEGietaLsileartgaaviAl 26 
                 ++E i+++L i +++tg +++ l
  EPX73866.1 250 LTEAIADGLII-STPTGSTAYSL 271
                 6899*******.78888877766 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 1.9
    Toprim_3  69 aagieavllepaegeDwndv 88 
                 ++gi  v+ + +e+ Dw ++
  EPX73866.1 345 DNGIPCVIRSHKED-DWMSD 363
                 68999999998777.99765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (379 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       421  (0.0234815); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2901.60
//
Query:       EPX73867.1  [L=2072]
Description: fatty acid synthase beta subunit Fas1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   6.8e-141  469.2   0.0   1.1e-140  468.6   0.0    1.3  1  DUF1729          Domain of unknown function (DUF1729)
    1.2e-76  258.3   0.4    3.9e-75  253.3   0.0    2.5  3  Acyl_transf_1    Acyl transferase domain
    4.6e-44  149.8   0.0      1e-43  148.6   0.0    1.6  1  FAS_meander      Fatty acid synthase meander beta sheet domai
    1.3e-37  128.7   0.3    4.4e-37  127.0   0.3    2.1  1  FAS_N            N-terminal domain in fatty acid synthase sub
    1.2e-32  113.6   0.5    2.5e-32  112.5   0.0    1.7  2  SAT              Starter unit:ACP transacylase in aflatoxin b
    1.1e-30  105.7   2.1    1.5e-30  105.3   0.3    2.1  2  MaoC_dehydratas  MaoC like domain
    1.5e-19   70.4   0.2    8.2e-19   68.1   0.1    2.4  2  MaoC_dehydrat_N  N-terminal half of MaoC dehydratase


Domain annotation for each model (and alignments):
>> DUF1729  Domain of unknown function (DUF1729)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  468.6   0.0  4.2e-144  1.1e-140       1     353 []     721    1080 ..     721    1080 .. 0.95

  Alignments for each domain:
  == domain 1  score: 468.6 bits;  conditional E-value: 4.2e-144
     DUF1729    1 piilqwtggraGGHHSledleaplletYakiRkqkNvvlvvGsGlgdaedsieyltGeWskelglppmPvdgillgsavmvakEaktseevkqlive 97  
                  pi++qwtggraGGHHS+ed++ap+l+tY+++R+++N+vl++GsG+g a+d+ +yltGeW++++ lp+mP+dgi++gs++mvakEa+ts  +k++iv+
  EPX73867.1  721 PIVMQWTGGRAGGHHSFEDFHAPILQTYSSVRRCDNIVLIAGSGFGGADDTEPYLTGEWTTAFKLPAMPFDGIMFGSRLMVAKEAHTSLGAKEAIVA 817 
                  79*********************************************************************************************** PP

     DUF1729   98 tpGvkdeeWeatykkpaGgvvsvrSelgepihkianraaklwkeldetifsleavekrkaalekkrdeiierlnkdyakpwfavd....eegelve. 189 
                  +pGv++++We+ty+ paGg+v+v Selgepihk+a+r+  +wkeld+tif l ++ kr+ al +k+++ii+rln d++k++f++      + e+ + 
  EPX73867.1  818 APGVSNADWEKTYDGPAGGIVTVMSELGEPIHKLATRGIMFWKELDDTIFAL-PRPKRVPALLAKKQYIIKRLNDDFQKVYFPARivkrLSSEKLQf 913 
                  ****************************************************.9****************************975322212222211 PP

     DUF1729  190 .....leemtYsevvrRlveLaflksrkewidpswkklfqdllqrveeRltaeehgeaesllesvealedPaeavetllaaypsaeaqlltaeDvaw 281 
                       +eemtY+ev+ R v+L++++++k+wid+s++ ++  l++r+eeR+ ++ +  +++l+e+ e+l+dP+ +v+ +l+ayp+a++q ++++Dv++
  EPX73867.1  914 eavggVEEMTYAEVLYRTVDLLYVTKEKRWIDVSLRTFTGSLMRRIEERF-TK-EVGKHTLIENFEDLNDPYPVVARFLEAYPEAHKQIMNTQDVQF 1008
                  1233589*******************************************.44.46778999*********************************** PP

     DUF1729  282 flqlvqrrgiKPvpFvPvldedfeaffkkdslwqsedldavvdqdaqrviilqgpvavryitkvdepvkeil 353 
                  f +l++++ +KPvpF+P++d+ fe ffkkdslwqsedl avv++d+ rv ilqgp+avr++tkv+ep+ke+l
  EPX73867.1 1009 FFSLCSNPFQKPVPFIPAIDDTFEYFFKKDSLWQSEDLGAVVGEDVGRVAILQGPMAVRHSTKVNEPAKELL 1080
                  **********************************************************************97 PP

>> Acyl_transf_1  Acyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.5   0.4       4.6   1.2e+04      88     102 ..     271     285 ..     269     289 .. 0.75
   2 ?    2.5   0.0     0.033        84     143     178 ..     362     397 ..     346     409 .. 0.82
   3 !  253.3   0.0   1.5e-78   3.9e-75       2     318 ..    1683    2058 ..    1682    2059 .. 0.96

  Alignments for each domain:
  == domain 1  score: -4.5 bits;  conditional E-value: 4.6
                    EE-TTHHHHHHHHCC CS
  Acyl_transf_1  88 vGHSlGElAaavvag 102
                     GHS+G + aa+v +
     EPX73867.1 271 TGHSQGVIIAAAVSA 285
                    5*****987777655 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.033
                    ..TT.EEEEEEECCCCECCEEHHHHHHHHHHHHHCC CS
  Acyl_transf_1 143 cqddvvgavansprrvvisgsqealrelvervskeg 178
                     + +v+++ +n+p++ v+sg+  +l  l   ++ke 
     EPX73867.1 362 EDRRVYLSLVNGPKSFVVSGPARSLYGLNLSLRKEK 397
                    5679*****************999987777777665 PP

  == domain 3  score: 253.3 bits;  conditional E-value: 1.5e-78
                     EEE--TT---TTTTCCHHHC-HHHHHHHHHHHHHCCHHHT--HHHHHHS--T.......................................... CS
  Acyl_transf_1    2 fvfsGqGsQwaGMGmeLlktskafaaviaradeafksqygfsvldvlrnnpe.......................................... 53  
                     +vf+GqGsQ++GMGm+L++ts+++++ ++ ad++f s+ygfs+ d+++nnp+                                          
     EPX73867.1 1683 YVFTGQGSQEQGMGMDLYATSAVAKKIWDSADKHFLSHYGFSIIDIVKNNPKditihfggakgkqirsnymamayekinddgstsvvpvfntit 1776
                     9********************************************************************************************* PP

                     ............TGGGSHHHHHHHHHHHHHHHHHHHHHTT..-TTSEEEE-TTHHHHHHHHCCSSSHHHHHHHHHHHHHHHHHHTS-EECCEEC CS
  Acyl_transf_1   54 ............glldaiqfvqpaLaavqialaellkskG..vrpaavvGHSlGElAaavvagalsseeallavvlrsrlmmqlagpgdmaave 133 
                                 gll+a+qf+qpaL+++++a++e++++kG  +++ a++GHSlGE++a+ +++++ s+eal+ +v+ ++l+mq+a+ +d+++++
     EPX73867.1 1777 eestsftfthpsGLLSATQFTQPALTLMEKAAFEDMRAKGlaQQDCAFAGHSLGEYSALSAMADVLSIEALVDLVFLRGLTMQNAVRRDELGRS 1870
                     ****************************************999999************************************************ PP

                     S.HHHHHHH..TT.EEEEEEECCCCECCEEHHHHHHHHHHHHHCC.CCEEECCCEECTTCCCCCCCCHHHHHHHHCCCHHCHHTTBEHCCCHHH CS
  Acyl_transf_1  134 laeeeeklrcqddvvgavansprrvvisgsqealrelvervskegvgalvenvnvavhspqvdaiadalasaladiaprkpkvakisstsldes 227 
                     +             +g+va++p+rv  +++ +alr +v ++++++   l e+vn++v+++q++  ++ +++ ++ +++++ k++ki+  +l e 
     EPX73867.1 1871 E-------------YGMVAANPSRVSPTFTDAALRFIVDHIGEQT-KLLLEIVNYNVENQQYVVSGNLMSLCTLGHVLNFLKIQKIDFQKLIET 1950
                     *.............*******************************.****************************************99988888 PP

                     ........HHHCHHHHHHHHHHHCHCCHCCHHTTS.SSECC-CCEECSSSSCCHCCCCCCCHH.......GGG-TCCCCCCTEETTSS-..HHH CS
  Acyl_transf_1  228 ........serelsaeywvanlrspvrfaeavlsa.aetiplvfveispHslllaalektlks.......aedvksatlvGklkrdltd..flv 303 
                             +  e+++  +++ l++      ++l++ ++tipl  +++++Hs  l+++++ +++        +++++ +l Gk++++lt+  f  
     EPX73867.1 1951 ltidqlkeQLSEIVEGCHEKTLKQKEEQGHLELERgFATIPL-KIDVPFHSSFLRGGVRMFREyllrkisPHQINVSKLRGKYIPNLTAkpFEI 2043
                     888886555556667778888888888888999999999998.69**********************999999********************* PP

                     CHHHHHHHHHHCT-H CS
  Acyl_transf_1  304 tflyllakahltgse 318 
                      ++y++++++ltgs+
     EPX73867.1 2044 SKEYFQNVYELTGSQ 2058
                     *************85 PP

>> FAS_meander  Fatty acid synthase meander beta sheet domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.6   0.0     4e-47     1e-43       3     146 .]    1143    1282 ..    1141    1282 .. 0.95

  Alignments for each domain:
  == domain 1  score: 148.6 bits;  conditional E-value: 4e-47
  FAS_meander    3 elpseeewlellageelsWlralltsetivqgkklveNPlrrllaprkgqlveieeadspektvvtvkeakesgelkkaveiklsedkeIsvtlie 98  
                   +lps ++w+ellage +sW+ra++t++++ qg kl +NP+rr+l+pr+gq+v i+ + +  + v++++e  + ge+  av+++ls+d  I+v+++e
   EPX73867.1 1143 SLPSAKAWFELLAGEAVSWRRAIFTTQRVAQGWKLEQNPVRRILSPRPGQRVVIKGHGN--DAVLEMFEL-QCGEHILAVRLSLSNDI-ITVSMFE 1234
                   79****************************************************97755..899999996.589999******99998.******* PP

  FAS_meander   99 ertaegesvpLeleFeYkpetglapIhEvmegrndrikeFYwklWfge 146 
                   +r+a ++ v+L++ F+Y+p+ g+ap+ E++egrndrik+FYw+lWf +
   EPX73867.1 1235 NRNALKKNVSLDFLFKYDPSVGYAPVAEIIEGRNDRIKHFYWQLWFAD 1282
                   **********************************************75 PP

>> FAS_N  N-terminal domain in fatty acid synthase subunit beta
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.0   0.3   1.7e-40   4.4e-37       1     128 [.      14     140 ..      14     141 .. 0.97

  Alignments for each domain:
  == domain 1  score: 127.0 bits;  conditional E-value: 1.7e-40
       FAS_N   1 slrplslthgslevsilvpaslylaaeqLrdeFtatlvaps....eeleqeeeplseieLlakFLgyvaksiestesstsqfedvlklvleefessyLk 95 
                 s+r+l+lt+++l+ sil+p+s+yl a+q+rdeF+a++vaps    e++ +e e+++e++L+a+FLg+va+++e++     q++++l++++ efe+++L+
  EPX73867.1  14 SVRSLALTYAHLCPSILIPSSQYLLAAQIRDEFQAKYVAPSteavEKEGAELEFEHELHLIARFLGLVASKEEKS---PDQYNQLLNTITLEFERTFLA 109
                 89***************************************99999999*********************99988...89******************* PP

       FAS_N  96 kndihalvsnLpsettllakkeviraYykalal 128
                 +n++ha+v+n+    +++a+k+v++ Yy+++al
  EPX73867.1 110 GNEVHAVVHNVG--LSVPAQKDVVCYYYRSRAL 140
                 ************..89**************997 PP

>> SAT  Starter unit:ACP transacylase in aflatoxin biosynthesis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.5   0.0   9.9e-36   2.5e-32       2     238 ..     163     411 ..     162     412 .. 0.89
   2 ?   -3.3   0.1       2.4     6e+03      92     132 ..    1809    1850 ..    1793    1851 .. 0.80

  Alignments for each domain:
  == domain 1  score: 112.5 bits;  conditional E-value: 9.9e-36
         SAT   2 lFGDq.tadvlpeLrkLlqakenplLrsFLekasealraeisrlpaaerkslp.rf.tslqellerysesglkspalssallciaqlaqfivy...lee 94 
                 +FG+q  +d+++eL++L+ + + p+ +++++++s+ l   +++ +a++  s   ++ ++l+   er+++++l ++++s++l++++ql+qf v+   l+ 
  EPX73867.1 163 IFGGQgYEDYFDELAELY-EVYAPFASELVQTLSKFLFSLVQNEQASKVYSKGlNVlEWLAG--ERPERDYLVTAPVSLPLVGLTQLVQFYVTaqiLGL 258
                 8****7777*********.99*********************97655544333333255543..6799*************************877788 PP

         SAT  95 npeeypspestylvGlCtGllaAaavacskslseLvplaveavrvafrlGlevar...........vaarleegsssssesWslavtglseeelekala 182
                 np e++s+  t ++G+++G++ Aaav++s++ +++++ a  a++++f++G+++++           va++++  +s+ + s++lav++l+ e l+k+++
  EPX73867.1 259 NPGELASR-FTAATGHSQGVIIAAAVSASTDQKSFIENAKVALTTLFWIGVRSQQvfptttlppsvVADSVA--NSEGNPSPMLAVRELPLEILNKHIE 354
                 99999975.78***************************************************9998888888..6666899****************** PP

         SAT 183 efneekglppasrvyisavssss.vtisGpPstl...eallksskakkkkkksklpiyap 238
                  +n + +  + +rvy s+v++++ +++sGp ++l   +  l+++ka+ +++  ++p +++
  EPX73867.1 355 ITNTHLP--EDRRVYLSLVNGPKsFVVSGPARSLyglNLSLRKEKADGQNQA-RIPHSKR 411
                 ***9988..78*********9888***********99999999999999876.9*99876 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 2.4
         SAT   92 leenpeeypspestylvGlCtGllaA.aavacskslseLvpl 132 
                  +e+ + ++ ++++   +G++ G  +A +a+a   s+++Lv+l
  EPX73867.1 1809 FEDMRAKGLAQQDCAFAGHSLGEYSAlSAMADVLSIEALVDL 1850
                  566677778888999*******99884688888888888875 PP

>> MaoC_dehydratas  MaoC like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1      0.78     2e+03      14     114 ..    1298    1399 ..    1289    1405 .. 0.60
   2 !  105.3   0.3     6e-34   1.5e-30      14     122 ..    1557    1667 ..    1546    1668 .. 0.94

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.78
                       EEEEEEHHHHHHHHHHHT---GGGT-HH.HHHHTTTSSSB--HHH..HHHHHHHHHHHHHSTTEGGGEEEEEEEE-.S--BTTCEEEEEEEE CS
  MaoC_dehydratas   14 keitvteadialyalvsgDlnpiHvdpe.fAkkagfggpIahGml..tlaivaklveeelgdnvvarvgeikvrFt.kpVlpgdtlkvelev 101 
                       +e t+t ++i+ + +  g++n   ++++   ++a+ + +I+ G+   t ai  k++  +l         ++++r + +p   gd++++ ++ 
       EPX73867.1 1298 PETTITANMIEDFCRTVGNHNEAYTNRAnNKRMAPMDFAIVVGWQaiTKAIFPKAIDGDLLR---LVHLSNSFRMVgSPLVEGDKVTTAATI 1386
                       67788888888888888888888888886777778888888777511334443333333333...233333444332456667777777777 PP

                       EEEEEEEEEEEEE CS
  MaoC_dehydratas  102 vgkrdvrktkkve 114 
                       +g  + +  k+v+
       EPX73867.1 1387 TGIVNNDSGKTVT 1399
                       7755555444444 PP

  == domain 2  score: 105.3 bits;  conditional E-value: 6e-34
                       EEEEEEHHHHHHHHHHHT---GGGT-HHHHHHTTTSSS..B--HHHHHHHHHHHHHHHHSTTEGGGEEEEEEEE-S--BTTCEEEEEEEEEE CS
  MaoC_dehydratas   14 keitvteadialyalvsgDlnpiHvdpefAkkagfggp..IahGmltlaivaklveeelgdnvvarvgeikvrFtkpVlpgdtlkvelevvg 103 
                        ++ vt+ ++ +ya vsgD+npiHv+p+fA+++ ++g+  I+hGm+++a+ +k ve+ +++nv+ rv+ ++v F+++Vlp+ +l ++l ++g
       EPX73867.1 1557 SPVFVTPPTNSPYADVSGDYNPIHVSPTFAAFVELPGThgITHGMYSSAATRKFVETFAAENVPERVKHYEVTFVNMVLPNTELVTKLSHTG 1648
                       567899******************************7666**************************************************** PP

                       EEEEEEEEEEEEEEEEEEE CS
  MaoC_dehydratas  104 krdvrktkkvevtkevtee 122 
                       ++++rk++kvev +++tee
       EPX73867.1 1649 MINGRKIIKVEVLNKETEE 1667
                       ***************9997 PP

>> MaoC_dehydrat_N  N-terminal half of MaoC dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       1.6     4e+03      48      68 ..     715     740 ..     706     747 .. 0.67
   2 !   68.1   0.1   3.2e-22   8.2e-19       6     130 ..    1294    1412 ..    1289    1414 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 1.6
  MaoC_dehydrat_N  48 iaPptflivlat...kap...elleal 68 
                       a ptf+iv+++   + +   + +e++
       EPX73867.1 715 KANPTFPIVMQWtggR-AgghHSFEDF 740
                      688********95431.1333555555 PP

  == domain 2  score: 68.1 bits;  conditional E-value: 3.2e-22
  MaoC_dehydrat_N    6 efepvkaevereavrefakavgetnpayldeeaaraagyrsliaPptflivlatkap..ell.ealgidlsrllhgeqefey.hepiraGDe 93  
                        f++ +++++++++ +f+++vg+ n+ay+++++       + +aP++f+iv++++a    ++ +a+++dl rl+h++++f++   p+++GD+
       EPX73867.1 1294 TFTGPETTITANMIEDFCRTVGNHNEAYTNRANN------KRMAPMDFAIVVGWQAItkAIFpKAIDGDLLRLVHLSNSFRMvGSPLVEGDK 1379
                       5778899**************************8......699***********775543446999****************677******* PP

  MaoC_dehydrat_N   94 lttesriadvydkkgvGalefivvettvtnqrGepva 130 
                       +tt ++i+ + +    ++++ ++v+ +v+ ++++ v 
       EPX73867.1 1380 VTTAATITGIVNN---DSGKTVTVKGVVY-RDNKEVI 1412
                       ************6...7899999999999.6666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2072 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       562  (0.0313459); expected 358.6 (0.02)
Passed bias filter:                      510  (0.0284455); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 1.11u 0.27s 00:00:01.38 Elapsed: 00:00:00.45
# Mc/sec: 13978.23
//
Query:       EPX73868.1  [L=315]
Description: brix domain-containing protein Rpf2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-41  143.0   0.1    1.6e-41  142.6   0.1    1.2  1  Brix             Brix domain
  ------ inclusion threshold ------
        8.2    6.8   8.7        8.3    6.8   1.3    2.4  2  Defensin_propep  Defensin propeptide


Domain annotation for each model (and alignments):
>> Brix  Brix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.6   0.1   1.8e-45   1.6e-41       2     193 .]      36     233 ..      35     233 .. 0.92

  Alignments for each domain:
  == domain 1  score: 142.6 bits;  conditional E-value: 1.8e-45
                 TT--HHHHHHHHHHHHHCTTSEEEEEEECT.-TTTHHHHHHH-HHHHHHHHHCTCSEEEEEE..S.STTE............EEEEEEEECECTGGGST CS
        Brix   2 rktssrlrqllkdlrslmkphtasflkrns.nklkdlvelagvthlellsekndcslfvfelskk.rPng............ptlefkvenyslmkdlk 86 
                 + ts+ + ++l+dl++l+kp +++f+k+ns  +++d       ++le++seknd++l vf +++k rP++            +++e+++ +y+++++++
  EPX73868.1  36 NATSQLVVDALHDLHALKKPFAVNFQKKNSiLPFED------SSSLEFFSEKNDAGLAVFASHNKkRPHNlawirffdyhvlDMIELGIVDYKPISSFR 128
                 67899999****************************......9*******************************************************9 PP

                 TTSTS-TT---EEEEES......HHHHHHHHHHHHHH..SEEEG..-B-GG-SEEEEEEES...CCTT...T.ECEEEEEEEEEEE..STTTTECT..T CS
        Brix  87 kakktefgsrPllvfng.....kenfkllksllqdlFrvpkislkspklsglrrvvlftaae..nqet...d.ktisfRhYaiklkksgkklpnlekek 174
                 +   +  g++P+++f+g     ++ f+++ksl++d+Fr ++i+    + +gl +v++++a e  +  +     ++++fR+Y  kl ks+++lp      
  EPX73868.1 129 TV-PIVPGTKPMMLFQGpsfdsHPVFRHIKSLFLDFFRGEPIQK--LDSAGLSYVIVVSAGEasE--DetqPlPRVNFRVYSTKLLKSKTNLP------ 216
                 88.*****************99999*************555643..5669*********977442..24553569******************...... PP

                 ..EEEEEEESEEEEEEEEE CS
        Brix 175 kerveLeEiGPrfdLklrk 193
                   r eLeE+GPr+d+ +r+
  EPX73868.1 217 --RLELEEMGPRLDFSIRR 233
                 ..*************9986 PP

>> Defensin_propep  Defensin propeptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   1.1    0.0077        69      17      42 ..     237     262 ..     235     264 .. 0.90
   2 ?    6.8   1.3   0.00093       8.3      22      43 ..     290     311 ..     282     315 .] 0.88

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.0077
  Defensin_propep  17 aqAeplqaradeapaqeqpgaeDqdv 42 
                      aqA+ lq++  + ++qe   +++ dv
       EPX73868.1 237 AQADVLQEALRKPKTQEPKTKKNVDV 262
                      9***************9998888887 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.00093
  Defensin_propep  22 lqaradeapaqeqpgaeDqdva 43 
                      l+++a ea+++++ ++eD+dv+
       EPX73868.1 290 LKRSAAEAEDEDESEEEDEDVV 311
                      677999***************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (315 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       778  (0.0433934); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.20s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 2509.00
//
Query:       EPX73869.1  [L=108]
Description: dynein light chain Dlc2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-37  127.8   1.8    1.5e-37  127.8   1.8    1.4  2  Dynein_light  Dynein light chain type 1


Domain annotation for each model (and alignments):
>> Dynein_light  Dynein light chain type 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1      0.51   9.2e+03       9      15 ..       9      15 ..       4      22 .. 0.46
   2 !  127.8   1.8   8.2e-42   1.5e-37       2      86 .]      25     107 ..      24     107 .. 0.98

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 0.51
                  E-HHHHH CS
  Dynein_light  9 mseemqe 15
                  m+++  e
    EPX73869.1  9 MNQASVE 15
                  3333222 PP

  == domain 2  score: 127.8 bits;  conditional E-value: 8.2e-42
                   -EEEEEEE-HHHHHHHHHHHHHHHHH-SSHH..HHHHHHHHHHHHHH-S-EEEEEEEEEEEEEEEETTEEEEEEETTEEEEEEE- CS
  Dynein_light   2 avikeadmseemqeeaielakealekfkkekekdiaayikkeldkkygptWhciVgksfgssvthekghfiyfyigklaillfKt 86 
                   +vik+ dm+eemq++a+++a +a+ekf++ek  diaa++k+e+dkky ptWhciVg++fgs+vthe+++f+yfy+g +a+llfK+
    EPX73869.1  25 VVIKAVDMEEEMQQDAVHTAVQAMEKFTVEK--DIAAFVKREFDKKYSPTWHCIVGRNFGSYVTHESHRFVYFYLGTIAFLLFKS 107
                   689**************************99..***************************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1060  (0.0591221); expected 358.6 (0.02)
Passed bias filter:                      579  (0.032294); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 805.60
//
Query:       EPX73870.1  [L=619]
Description: hypothetical protein SOCG_03089 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.1e-13   49.3  10.2    2.4e-09   36.8   1.1    4.2  4  LRR_8      Leucine rich repeat
    4.7e-10   39.6  12.8      9e-05   22.8   1.1    4.8  6  LRR_4      Leucine Rich repeats (2 copies)
    6.5e-05   22.5   0.6    0.00017   21.2   0.6    1.7  1  LRR_9      Leucine-rich repeat
     0.0017   18.3  13.4        9.1    6.6   0.1    5.7  6  LRR_6      Leucine Rich repeat
  ------ inclusion threshold ------
      0.022   15.0   0.7       0.21   11.8   0.1    2.6  2  DASH_Dad1  DASH complex subunit Dad1
      0.049   14.2   0.0       0.15   12.6   0.0    1.8  1  DUF1374    Protein of unknown function (DUF1374)
        1.7    9.5  14.1         44    5.2   0.1    6.5  5  LRR_1      Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> LRR_8  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0      0.29   7.5e+02      15      29 ..     180     194 ..     179     194 .. 0.82
   2 ?   -1.7   0.1      0.97   2.5e+03       3      17 ..     212     226 ..     210     231 .. 0.73
   3 !   36.8   1.1   9.2e-13   2.4e-09       9      61 .]     339     390 ..     332     390 .. 0.94
   4 !   14.9   0.2   6.3e-06     0.016      24      61 .]     401     436 ..     392     436 .. 0.89

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.29
                 EE-TTSSTT-TT--E CS
       LRR_8  15 slddeaFkglsnLkv 29 
                 +++ ++Fk+ls+L+v
  EPX73870.1 180 AVPITVFKNLSSLEV 194
                 677789******986 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.97
                 -SEEE-TTS--SEE- CS
       LRR_8   3 LtsLdLsnNrltsld 17 
                 L+sL+L++  l +l+
  EPX73870.1 212 LKSLSLHRCDLVDLS 226
                 778888877777765 PP

  == domain 3  score: 36.8 bits;  conditional E-value: 9.2e-13
                 TTS--SEE-TTSSTT-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8   9 snNrltslddeaFkglsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61 
                 sn +l+ +++++F  l +L +LdLs N+l  + p a++ Lp+LrsL+L +N++
  EPX73870.1 339 SNCSLKYISPKTFLPLVSLLSLDLSGNELVEI-PSALAELPQLRSLNLASNKI 390
                 4667999*************************.9*****************97 PP

  == domain 4  score: 14.9 bits;  conditional E-value: 6.3e-06
                 -TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8  24 lsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61 
                 l++L++L L +N+l+ ls   ++  p L+ Ld+++N +
  EPX73870.1 401 LRSLQTLVLACNQLKDLS--GLEAAPTLQRLDIRDNLI 436
                 899**************9..9*************9986 PP

>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       4.4   1.1e+04      22      30 ..     186     194 ..     180     212 .. 0.74
   2 ?   -0.2   0.3      0.58   1.5e+03      25      39 ..     212     222 ..     187     231 .. 0.71
   3 ?   -0.1   0.1      0.56   1.4e+03      23      33 ..     331     341 ..     311     353 .. 0.54
   4 !   12.4   0.4   6.5e-05      0.17       3      33 ..     333     365 ..     331     371 .. 0.84
   5 !   22.8   1.1   3.5e-08     9e-05       2      36 ..     356     390 ..     355     397 .. 0.88
   6 !   20.2   0.0   2.2e-07   0.00057       2      36 ..     403     436 ..     402     443 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 4.4
                 -TT--EEE- CS
       LRR_4  22 lpnLkeLdL 30 
                 ++nL +L +
  EPX73870.1 186 FKNLSSLEV 194
                 677777765 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.58
                 --EEE-.-S-----G CS
       LRR_4  25 LkeLdLsgNnlitdl 39 
                 Lk+L+L+++    dl
  EPX73870.1 212 LKSLSLHRC----DL 222
                 666666666....33 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.56
                 TT--EEE-.-S CS
       LRR_4  23 pnLkeLdLsgN 33 
                  +L ++ +s++
  EPX73870.1 331 SQLLYFRCSNC 341
                 44555555444 PP

  == domain 4  score: 12.4 bits;  conditional E-value: 6.5e-05
                 --EEE--SS---E-S-...HHH-TT--EEE-.-S CS
       LRR_4   3 LevLdLsnNqltdipl...leklpnLkeLdLsgN 33 
                 L +  +sn+ l+ i++   l  l +L +LdLsgN
  EPX73870.1 333 LLYFRCSNCSLKYISPktfLP-LVSLLSLDLSGN 365
                 667889**********99555.************ PP

  == domain 5  score: 22.8 bits;  conditional E-value: 3.5e-08
                 S--EEE--SS---E-S-.HHH-TT--EEE-.-S--- CS
       LRR_4   2 nLevLdLsnNqltdipl.leklpnLkeLdLsgNnli 36 
                 +L +LdLs+N l +ip+ l+ lp+L++L+L +N +i
  EPX73870.1 356 SLLSLDLSGNELVEIPSaLAELPQLRSLNLASN-KI 390
                 6889*************9889*********888.55 PP

  == domain 6  score: 20.2 bits;  conditional E-value: 2.2e-07
                 S--EEE--SS---E-S-HHH-TT--EEE-.-S--- CS
       LRR_4   2 nLevLdLsnNqltdiplleklpnLkeLdLsgNnli 36 
                 +L++L L+ Nql+d+++le  p L+ Ld+ + nli
  EPX73870.1 403 SLQTLVLACNQLKDLSGLEAAPTLQRLDI-RDNLI 436
                 7*******99*********9*********.65577 PP

>> LRR_9  Leucine-rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.6   6.6e-08   0.00017      47     132 ..     360     443 ..     354     477 .. 0.79

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 6.6e-08
       LRR_9  47 idlsdndirkl.dgfPllkrlktlllnnnrivriaegleevlPnleelvltnnelqeladldPlaslkklellsllknpvtnkkeyr 132
                 +dls n++ ++   +  l +l++l l++n+iv+     +  l +l++lvl+ n+l++l+ l+   +l++l    + +n +++  e+r
  EPX73870.1 360 LDLSGNELVEIpSALAELPQLRSLNLASNKIVNCRTFYHIELRSLQTLVLACNQLKDLSGLEAAPTLQRL---DIRDNLIVDPVEFR 443
                 7999999999844688999999999999999999999999999999999999999999887665555554...45555555555555 PP

>> LRR_6  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1       2.5   6.4e+03       5      15 ..     212     222 ..     210     224 .. 0.83
   2 ?   -2.9   0.1       4.2   1.1e+04       4      11 ..     262     269 ..     261     271 .. 0.79
   3 !    5.3   0.3    0.0096        25       4      15 ..     356     367 ..     354     368 .. 0.89
   4 !    6.2   0.0    0.0049        13       3      15 ..     378     390 ..     376     391 .. 0.90
   5 !    6.6   0.1    0.0036       9.1       3      17 ..     402     416 ..     400     420 .. 0.90
   6 !    5.3   0.0    0.0092        24       3      15 ..     424     436 ..     422     439 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 2.5
       LRR_6   5 LteLdLsgNdI 15 
                 L++L+L  +d+
  EPX73870.1 212 LKSLSLHRCDL 222
                 89999988885 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 4.2
       LRR_6   4 hLteLdLs 11 
                 + t+L+L+
  EPX73870.1 262 STTSLNLR 269
                 5699**97 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.0096
       LRR_6   4 hLteLdLsgNdI 15 
                 +L +LdLsgN++
  EPX73870.1 356 SLLSLDLSGNEL 367
                 799*******85 PP

  == domain 4  score: 6.2 bits;  conditional E-value: 0.0049
       LRR_6   3 thLteLdLsgNdI 15 
                 + L++L+L++N+I
  EPX73870.1 378 PQLRSLNLASNKI 390
                 569********98 PP

  == domain 5  score: 6.6 bits;  conditional E-value: 0.0036
       LRR_6   3 thLteLdLsgNdIgD 17 
                 ++L++L L++N++ D
  EPX73870.1 402 RSLQTLVLACNQLKD 416
                 79***********98 PP

  == domain 6  score: 5.3 bits;  conditional E-value: 0.0092
       LRR_6   3 thLteLdLsgNdI 15 
                 ++L+ Ld+++N I
  EPX73870.1 424 PTLQRLDIRDNLI 436
                 79*********87 PP

>> DASH_Dad1  DASH complex subunit Dad1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1      0.33   8.4e+02      16      34 ..      58      76 ..      55      78 .. 0.87
   2 ?   11.8   0.1   8.3e-05      0.21      28      53 ..     102     127 ..     102     128 .. 0.93

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.33
   DASH_Dad1 16 smeevlnnlnaLNRsLEev 34
                ++ee+  n+  LN+++E++
  EPX73870.1 58 QFEEIDVNTGPLNIRIENL 76
                68999999*********97 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 8.3e-05
   DASH_Dad1  28 NRsLEeviavgkeFesVaaLWssFyn 53 
                 N s+ +v ++g+  ++V++LWs+F++
  EPX73870.1 102 NMSMKSVATIGSVLSQVSSLWSRFST 127
                 77999*******************86 PP

>> DUF1374  Protein of unknown function (DUF1374)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   5.9e-05      0.15      23      78 ..     429     478 ..     423     486 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 5.9e-05
                 EEEEEEEEEEHHHHHHCC-S-SEEEEEECTTEEEEEEEEE-SSSEEEEEEEEEEEC CS
     DUF1374  23 lklkkelivsenefeeligkpdssnsvknnnilideyvYdenddiikkLiieYvke 78 
                 l ++++liv+  ef+ l+g+ +     ++  i ++ ++  ++++ i  Li++Y++e
  EPX73870.1 429 LDIRDNLIVDPVEFRRLVGNTNF----EEAYIASNPFTKTNSSHRI--LIFNYFRE 478
                 67899**************9985....678899999**********..******97 PP

>> LRR_1  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.1      0.21   5.4e+02       2      13 ..     212     223 ..     188     235 .. 0.84
   2 ?   -1.4   0.1       2.6   6.7e+03       7      21 ..     338     352 ..     332     354 .. 0.69
   3 ?    5.2   0.1     0.017        44       2      20 ..     357     374 ..     356     377 .. 0.73
   4 ?    3.4   0.8     0.065   1.7e+02       1      13 [.     379     397 ..     379     421 .. 0.75
   5 ?    2.7   0.0      0.11   2.8e+02       2      12 ..     426     436 ..     425     467 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.21
       LRR_1   2 LrhLdLsnnpll 13 
                 L++L L ++ l 
  EPX73870.1 212 LKSLSLHRCDLV 223
                 889999999884 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 2.6
       LRR_1   7 Lsnnpllglppnsfq 21 
                  sn++l  ++p +f 
  EPX73870.1 338 CSNCSLKYISPKTFL 352
                 589999777777775 PP

  == domain 3  score: 5.2 bits;  conditional E-value: 0.017
       LRR_1   2 LrhLdLsnnpllglppnsf 20 
                 L +LdLs+n l   +p+++
  EPX73870.1 357 LLSLDLSGNEL-VEIPSAL 374
                 779********.5555554 PP

  == domain 4  score: 3.4 bits;  conditional E-value: 0.065
       LRR_1   1 nLrhLdLsnnpl......l 13 
                 +Lr+L+L +n +       
  EPX73870.1 379 QLRSLNLASNKIvncrtfY 397
                 59*****999975444443 PP

  == domain 5  score: 2.7 bits;  conditional E-value: 0.11
       LRR_1   2 LrhLdLsnnpl 12 
                 L++Ld+++n +
  EPX73870.1 426 LQRLDIRDNLI 436
                 9*******986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (619 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       736  (0.0410508); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.61u 0.25s 00:00:00.86 Elapsed: 00:00:00.44
# Mc/sec: 4224.51
//
Query:       EPX73871.1  [L=142]
Description: diphthamide biosynthesis protein Dph4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-16   59.2   1.1    4.3e-16   58.4   1.1    1.4  1  zf-CSL    CSL zinc finger
    1.3e-14   54.1   1.0    3.9e-14   52.5   0.4    1.9  2  DnaJ      DnaJ domain


Domain annotation for each model (and alignments):
>> zf-CSL  CSL zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.4   1.1   4.8e-20   4.3e-16       3      58 ..      80     132 ..      78     133 .. 0.89

  Alignments for each domain:
  == domain 1  score: 58.4 bits;  conditional E-value: 4.8e-20
                 EEGGGSEEETTTTEEEEEETTSSE..EEEEHHHHHTT....--EEEETTSSEEEEEE- CS
      zf-CSL   3 veledfefdeeeesyyypCRCgde..FelteedleegaegaevvvqCssCSLwikVkf 58 
                 v+l++f+ + e++syyypCRCg+   +++tee+le++    e v+ C +CSL+i+V +
  EPX73871.1  80 VDLSEFD-ELEDGSYYYPCRCGELggYVVTEENLENE----ESVIPCLGCSLTIQVAY 132
                 6677766.447899***********************....***************98 PP

>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.5   0.4   4.3e-18   3.9e-14       1      62 [.       2      65 ..       2      65 .. 0.93
   2 ?   -1.1   0.0      0.24   2.1e+03      46      55 ..     128     137 ..     126     141 .. 0.80

  Alignments for each domain:
  == domain 1  score: 52.5 bits;  conditional E-value: 4.3e-18
                HHHHHHTSSTT..G-HHHHHHHHHHHHHHHSTTTSCCHHHHHHHHHHHHHHHHHHTSHHHHHHH CS
        DnaJ  1 dyYeiLgvskd..asedeIkkaYrklalkyHPDknpkdpeaeekFkeineAyevLsdpekRkqY 62
                ++Y++L+++kd   ++d+Ik+aYrk  l++HPDk ++ +  +    +i eA+++L  +e R+++
  EPX73871.1  2 NPYAVLNLEKDesYTDDQIKEAYRKALLQFHPDKRKDIQPGRYSVDQIREAFQILASEEGRENF 65
                68*********4447999*****************99999********************9986 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.24
                 HHHHHHHHTS CS
        DnaJ  46 ineAyevLsd 55 
                 i+ Ayev  +
  EPX73871.1 128 IQVAYEVVET 137
                 899**99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       561  (0.0312901); expected 358.6 (0.02)
Passed bias filter:                      431  (0.0240393); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.26s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 1067.71
//
Query:       EPX73872.1  [L=703]
Description: hsp90-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   2.4e-223  742.7  30.1   3.1e-223  742.4  30.1    1.1  1  HSP90        Hsp90 protein
    5.5e-15   55.9   0.1    9.9e-15   55.0   0.1    1.5  1  HATPase_c    Histidine kinase-, DNA gyrase B-, and HSP90-like
    1.6e-10   41.0   0.2    1.6e-10   41.0   0.2    2.0  2  HATPase_c_3  Histidine kinase-, DNA gyrase B-, and HSP90-like
  ------ inclusion threshold ------
      0.034   14.1   0.6        1.4    9.0   0.0    3.2  3  Ubiq-assoc   Ubiquitin-associated


Domain annotation for each model (and alignments):
>> HSP90  Hsp90 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  742.4  30.1  6.8e-227  3.1e-223       2     515 ..     185     699 ..     184     701 .. 0.97

  Alignments for each domain:
  == domain 1  score: 742.4 bits;  conditional E-value: 6.8e-227
                 GGSHHHHHHHHHHCCTTSSS-EEEEEEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXEEEEEEESXXSXGGGSXGGGSXHH CS
       HSP90   2 yleekklkelvkkySeFinfpiyllkekeeekeveeeeeeeeeeeeeeeeeakveeeeeeeee..kkktkkvketvkewellNkqkpiWlrkpkevtee 98 
                 yleek++k+ vkk+SeFi++pi+l++++e+ek+v++ee+++ee +ee+++ +k+ee+++e+e+  +kktkkvket++e+e+lNk+kpiW+r+p+ev++e
  EPX73872.1 185 YLEEKTIKDTVKKHSEFISYPIQLVVTREVEKDVPQEEDTTEEVKEEDDKAPKIEEVDDESEKkeEKKTKKVKETTTENEELNKTKPIWTRNPNEVSKE 283
                 9******************************************************9999988878999******************************* PP

                 HHHHHHHHTTTTTSXXSEEEEEEEXSSSXEEEEEEEXSSXXTTTTTTTTTSXXTTEEEEETTEEEESXXTTSSXGGGTTXEEEEEESSSXSSSTHHHHH CS
       HSP90  99 eYkeFYkslskdsedplavkhfsaegevefkaiLfvPkrapsdlfekykkkkknnikLYvrrVfitdefedllPkyLsFvkGvvdsddLPLNvsREtlq 197
                 eY++FYksl++d+ed+lavkhfs+eg++ef+a+Lf P+rap+dlfe   kkkk+nikLYvrrVfitd++e+l+P++LsF+kGvvds+dLPLN+sRE+lq
  EPX73872.1 284 EYASFYKSLTNDWEDHLAVKHFSVEGQLEFRAVLFAPRRAPMDLFEA--KKKKTNIKLYVRRVFITDDCEELIPEWLSFIKGVVDSEDLPLNLSREMLQ 380
                 **********************************************7..7999********************************************** PP

                 TCHHHHHHHHHHHHHHHHHHHTSXHHH..HHTHHHHHHHHHHHHHHHXGGGHHHHHTTXEEEETTEEEEEEEHHHHHHHSXTTXXEEEEEEXSSHHHHH CS
       HSP90 198 qnkilkvikkklvrKvlemlkklaeekeeykkfykefsknlklGiiedsanrkklakLlrfksskseeeltsLedYvermkekqksiYyiageskeeve 296
                 qnki+kvi+k+lvr++l+m++++ae+ke++k+fy++fsknlklGi+ed+anr  lakLlr++s +s+++++s+edY+++m e+qk+iY+i+gesk++ve
  EPX73872.1 381 QNKIMKVIRKNLVRRCLDMFSEIAEDKENFKTFYEAFSKNLKLGIHEDAANRPALAKLLRYNSLNSTDDMISFEDYITKMPEHQKNIYFITGESKQAVE 479
                 *************************************************************************************************** PP

                 TSGGGHHHHHTTXXEEEEXSTTHHHHHHTXSEETTEEEEETTBSTXXXXXXHHHHHHHHHHHHHHHHHHHHHHHTTTTTESEEEEXSSXSSXSEEEEBX CS
       HSP90 297 kspflerlkkkgyevlylvdpiDeyvvqqlkeyegkklvnvakegleleeeeeekkkkeelkkkfeeltkllkevlkdkvekvkvserlvdsPcvlvts 395
                 +spfle +++k+++vl++vdpiDey+v+qlke+egkklvn++k+glelee++eek+++e+l+k++ee++k lk++l+dkvekv+vs+++v sPc+l+t+
  EPX73872.1 480 NSPFLEVFRAKKFDVLFMVDPIDEYAVTQLKEFEGKKLVNITKDGLELEETDEEKANREKLEKEYEEFAKQLKTILGDKVEKVTVSNKIVGSPCLLTTG 578
                 *************************************************************************************************** PP

                 TTSXXHHHHHHHHHHHHHHHSSTSSSSSXEEEEEXTTSHHHHHHHHHHHH.TTTXHHHHHHHHHHHHHHHHHTTXXXSXHHHHHHHHHHHHTTTTHXXS CS
       HSP90 396 eygwsanmerimkaqalrdkskssymsskktleinprhpiikeLkkkvee.dkedeeakdlaellyetallesGfsledpasfakrierllklslgide 493
                 +ygwsanmerimkaqalrd+s+s+ymsskkt+einp+ +ii eLkkkv+e  +ed+++kdla++l+etall+sGfsl+dp+++a ri+rl++l+l+ide
  EPX73872.1 579 QYGWSANMERIMKAQALRDTSMSAYMSSKKTFEINPKSAIIAELKKKVDEsGTEDRSVKDLATILFETALLSSGFSLDDPSAYAGRINRLISLGLSIDE 677
                 ************************************************9846789******************************************98 PP

                 TTTTTTGGGXGGGXXXXXXXXX CS
       HSP90 494 deeveeeeeveeeeeeeeeeee 515
                 +e   +e+++e ++ee+ e++ 
  EPX73872.1 678 EEVPVAEQTAEPTKEEAVESKM 699
                 8888888777777766666554 PP

>> HATPase_c  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.0   0.1   2.2e-18   9.9e-15       1     111 [.      27     181 ..      27     182 .. 0.81

  Alignments for each domain:
  == domain 1  score: 55.0 bits;  conditional E-value: 2.2e-18
                 EHHHHHHHHHHHHHHHHHHH.........HS.TTTEEEEEEEEEETEEEEEEEESSSSSTTHHHT.......GTCS.TTCH.....HCSTCHTSTSSSH CS
   HATPase_c   1 gdekrLrqiisnlvdNavkf.........at.kageieveikaseddlvisveDnGiGipkedlk.......klfe.kfsq.....ddstkrggggtGl 76 
                 ++e++Lr+iisn +d+++k+         a  +++e  ++i+++++ + +s++D+GiG++k+dl        k+++  f++     +d +++  g++G+
  EPX73872.1  27 NKEIFLREIISNSSDALDKIryqslsdphALdNEKEMYIRITPNKESKILSIRDTGIGMTKNDLInnlgviaKSGTkQFMEaaasgADISMI--GQFGV 123
                 5899****************99988877633578899999998778**************************99999999999745445555..55555 PP

                 HHHHH................HH.HHH.HTTTEEEE...EEET..TTEEEEEEEEESS CS
   HATPase_c  77 Glsiv................kk.lve.lmgGeiwv...esep..grGttftftlple 111
                 G++ +                ++ ++e   gG+++v   ++ p  grGt+++++++++
  EPX73872.1 124 GFYSAylvadkveviskhnddEQyIWEsSAGGSFNVtldTEGPrlGRGTEIRLHMKED 181
                 555554449999999999999666899889999999665333388*********9987 PP

>> HATPase_c_3  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.0   0.2   3.5e-14   1.6e-10       1      99 [.      25     146 ..      25     154 .. 0.81
   2 ?   -3.5   1.1       1.8   8.2e+03      93     114 ..     246     267 ..     238     284 .. 0.46

  Alignments for each domain:
  == domain 1  score: 41.0 bits;  conditional E-value: 3.5e-14
  HATPase_c_3   1 ysl.ekAlaelvdNsldAdaen..................vkievnknrgktgeivieDdGkGmseeelknalr.latsskeakr.......kstslG 71 
                  ys+ e+ l e++ Ns dA  +                   + i+ nk+   ++ ++i+D G Gm++++l+n l  +a+s +++         +   +G
   EPX73872.1  25 YSNkEIFLREIISNSSDALDKIryqslsdphaldnekemyIRITPNKE---SKILSIRDTGIGMTKNDLINNLGvIAKSGTKQFMeaaasgaDISMIG 119
                  566688899*********88778999************6666666664...689*****************8853777777744333333335666** PP

  HATPase_c_3  72 kkGiGlklAslslgkkltvitkkegess 99 
                  ++G+G + ++  +++k++vi+k++++++
   EPX73872.1 120 QFGVG-FYSAYLVADKVEVISKHNDDEQ 146
                  *****.999999***********98765 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 1.8
  HATPase_c_3  93 kkegesstltldvdkidkenek 114
                   k++e+ t +++ + +++e+ +
   EPX73872.1 246 EKKEEKKTKKVKETTTENEELN 267
                  3444444444444433333322 PP

>> Ubiq-assoc  Ubiquitin-associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.1     0.069   3.1e+02       9      16 ..      12      19 ..      10      23 .. 0.91
   2 ?   -2.1   0.0      0.92   4.1e+03      31      42 ..     451     462 ..     448     464 .. 0.81
   3 ?    9.0   0.0   0.00031       1.4      10      22 ..     665     677 ..     664     679 .. 0.90

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.069
                HHHHHHHH CS
  Ubiq-assoc  9 EiAkLMSL 16
                Ei +LMSL
  EPX73872.1 12 EISQLMSL 19
                9******9 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.92
                 -SSHHHHHHHHH CS
  Ubiq-assoc  31 ilYedllekrke 42 
                 i++ed++ k+ e
  EPX73872.1 451 ISFEDYITKMPE 462
                 89******9976 PP

  == domain 3  score: 9.0 bits;  conditional E-value: 0.00031
                 HHHHHHH---SHH CS
  Ubiq-assoc  10 iAkLMSLGLsidk 22 
                 i +L SLGLsid+
  EPX73872.1 665 INRLISLGLSIDE 677
                 679*********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (703 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2015  (0.112388); expected 358.6 (0.02)
Passed bias filter:                      513  (0.0286129); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.75u 0.30s 00:00:01.05 Elapsed: 00:00:00.46
# Mc/sec: 4605.23
//
Query:       EPX73873.1  [L=182]
Description: myosin II regulatory light chain Rlc1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.5e-11   42.6   1.1    4.2e-06   26.2   0.3    3.2  2  EF-hand_6  EF-hand domain
      1e-10   40.3   0.5    3.1e-07   29.4   0.3    2.9  2  EF-hand_1  EF hand
    2.3e-08   34.3   0.4    1.4e-05   25.5   0.1    2.4  2  EF-hand_7  EF-hand domain pair
    0.00011   21.6   2.0     0.0035   16.8   0.9    2.5  2  EF-hand_5  EF hand


Domain annotation for each model (and alignments):
>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   0.3   9.4e-10   4.2e-06       1      30 [.      47      75 ..      47      76 .. 0.93
   2 !   12.7   0.0   2.1e-05     0.096       2      28 ..     117     143 ..     116     164 .. 0.90

  Alignments for each domain:
  == domain 1  score: 26.2 bits;  conditional E-value: 9.4e-10
   EF-hand_6  1 elreaFklfDkdgdGkidaeElrkalrkal 30
                el+eaF l+DkdgdG i  ++l+ +l+ +l
  EPX73873.1 47 ELKEAFALLDKDGDGNIGEDDLKTMLS-SL 75
                799***********************9.65 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 2.1e-05
   EF-hand_6   2 lreaFklfDkdgdGkidaeElrkalrk 28 
                 l eaF  fD + +Gki +  l+ al++
  EPX73873.1 117 LLEAFATFDDTQSGKIPIGLLKEALST 143
                 789**************9999999995 PP

>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4   0.3     7e-11   3.1e-07       1      29 []      47      75 ..      47      75 .. 0.95
   2 !    8.2   0.0   0.00043       1.9       2      17 ..     117     132 ..     116     144 .. 0.88

  Alignments for each domain:
  == domain 1  score: 29.4 bits;  conditional E-value: 7e-11
                HHHHHHHHHTTTSSSEEEHHHHHHHHHHH CS
   EF-hand_1  1 elkeiFrefDkDgdGkIdfeEfkellkkl 29
                elke+F+++DkDgdG I  +++k++l++l
  EPX73873.1 47 ELKEAFALLDKDGDGNIGEDDLKTMLSSL 75
                79***********************9875 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.00043
                 HHHHHHHHTTTSSSEE CS
   EF-hand_1   2 lkeiFrefDkDgdGkI 17 
                 l e+F+ fD  ++GkI
  EPX73873.1 117 LLEAFATFDDTQSGKI 132
                 789************9 PP

>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.5   0.1   3.1e-09   1.4e-05       2      52 ..      46      90 ..      45      93 .. 0.89
   2 !    6.9   0.0     0.002       8.8       3      49 ..     116     156 ..     114     175 .. 0.76

  Alignments for each domain:
  == domain 1  score: 25.5 bits;  conditional E-value: 3.1e-09
   EF-hand_7  2 eklkeaFkelDtdgdgyldkeellrllrkifqgagegsklsdeelellfke 52
                ++lkeaF +lD+dgdg + +++l+ +l       + + ++s++ +e++f+ 
  EPX73873.1 46 QELKEAFALLDKDGDGNIGEDDLKTMLS------SLNQDSSSQIIEQMFDS 90
                689*********************9999......77888788999999876 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.002
   EF-hand_7   3 klkeaFkelDtdgdgyldkeellrllrkifqgagegsklsdeelell 49 
                 +l eaF  +D  ++g++    l+++l  +      g+ ++ + +e +
  EPX73873.1 116 DLLEAFATFDDTQSGKIPIGLLKEALSTM------GDRIDVKDVESI 156
                 6889****************999999954......444444444444 PP

>> EF-hand_5  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.9   7.9e-07    0.0035       1      24 [.      48      71 ..      48      72 .. 0.91
   2 ?    3.4   0.0     0.013        58       2      16 ..     119     132 ..     117     132 .. 0.87

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 7.9e-07
                HHHHHHHH-SS-SSCE-HHHHHHH CS
   EF-hand_5  1 lkdtFqaiDlNgDGkIskeELktl 24
                lk++F  +D++gDG I  + Lkt+
  EPX73873.1 48 LKEAFALLDKDGDGNIGEDDLKTM 71
                6789*****************997 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.013
                 HHHHHHH-SS-SSCE CS
   EF-hand_5   2 kdtFqaiDlNgDGkI 16 
                 ++ F  +D  ++GkI
  EPX73873.1 119 EA-FATFDDTQSGKI 132
                 45.9**********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       585  (0.0326287); expected 358.6 (0.02)
Passed bias filter:                      492  (0.0274416); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1286.34
//
Query:       EPX73874.1  [L=291]
Description: hypothetical protein SOCG_03093 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        4.9    7.2   5.6       0.26   11.3   0.4    1.6  2  PgaD      PgaD-like protein


Domain annotation for each model (and alignments):
>> PgaD  PgaD-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.4   0.7         1   1.8e+04      25      32 ..      71      78 ..      68      84 .. 0.80
   2 ?   11.3   0.4   1.5e-05      0.26      29      96 ..     164     231 ..     145     237 .. 0.73

  Alignments for each domain:
  == domain 1  score: -4.4 bits;  conditional E-value: 1
        PgaD 25 WagwiyLf 32
                W++ iyLf
  EPX73874.1 71 WIIIIYLF 78
                88888888 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 1.5e-05
        PgaD  29 iyLfvpllvllawllglelfeaeill.glfseasasevegslseletlrlYalilvviavlLilWakln 96 
                  yLf+++  +l +++   + +a + + g ++ +++ +  g+ ++++++++Y++++v +av ++ W+   
  EPX73874.1 164 SYLFTKICSVLPNMCVAVICTASLNVvGFVVYHNVKKIIGF-EKMNDIAFYGVCIVNVAVFVLFWSTTD 231
                 58888877777666555555444443045555555555555.9**********************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (291 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       728  (0.0406046); expected 358.6 (0.02)
Passed bias filter:                      326  (0.0181828); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2128.21
//
Query:       EPX73875.1  [L=444]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-06   27.8   4.8       0.06   13.7   0.3    4.5  4  TPR_17    Tetratricopeptide repeat
      0.006   16.2   0.7       0.55   10.0   0.2    2.9  2  TPR_11    TPR repeat
     0.0085   16.4   3.1      0.073   13.4   0.5    3.4  3  TPR_12    Tetratricopeptide repeat
  ------ inclusion threshold ------
       0.03   15.1   3.2         59    4.9   0.0    5.6  5  TPR_14    Tetratricopeptide repeat
       0.17   12.6   0.7        1.7    9.5   0.2    2.9  3  Sel1      Sel1 repeat
        9.2    6.8  13.3         49    4.5   0.0    5.9  7  TPR_8     Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.3     2e-05      0.06       2      25 ..      61      84 ..      60     101 .. 0.84
   2 !   10.5   0.0   0.00021      0.64      11      25 ..     115     129 ..     108     144 .. 0.79
   3 ?   -0.6   0.0      0.75   2.2e+03      13      26 ..     304     317 ..     302     324 .. 0.77
   4 ?    1.1   0.0      0.22   6.5e+02      11      21 ..     385     395 ..     385     404 .. 0.92

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 2e-05
      TPR_17  2 ylkaleldPnnadaynnLAelllk 25
                y + l    n++da++n+A+l+l+
  EPX73875.1 61 YDEYLSVKSNDFDAWFNKARLYLN 84
                888899999*************95 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00021
      TPR_17  11 nnadaynnLAelllk 25 
                 +n++ay+nLA++++ 
  EPX73875.1 115 TNSEAYFNLAQTHKF 129
                 8***********983 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.75
      TPR_17  13 adaynnLAelllkn 26 
                 ada+ ++Ae+l ++
  EPX73875.1 304 ADAFAEYAETLIQA 317
                 899******99754 PP

  == domain 4  score: 1.1 bits;  conditional E-value: 0.22
      TPR_17  11 nnadaynnLAe 21 
                 nna++++++A+
  EPX73875.1 385 NNAKVMYERAY 395
                 8********97 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.2   0.00018      0.55      10      41 ..      54      85 ..      54      86 .. 0.95
   2 ?    3.3   0.0     0.022        67      19      38 ..     109     127 ..     100     128 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00018
      TPR_11 10 yeeAieaYkkAlkldPdnaeayynLGlayykq 41
                ye+A +aY + l  ++++ +a++n + +y+++
  EPX73875.1 54 YEKASKAYDEYLSVKSNDFDAWFNKARLYLNM 85
                9************************9999875 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.022
      TPR_11  19 kAlkldPdnaeayynLGlay 38 
                 kAl l ++n eay+nL++++
  EPX73875.1 109 KALSL-ETNSEAYFNLAQTH 127
                 55555.36779******987 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.78   2.3e+03      57      73 ..      19      35 ..       5      39 .. 0.58
   2 ?    0.5   0.0      0.25   7.6e+02      18      54 ..      46      81 ..      39      88 .. 0.71
   3 !   13.4   0.5   2.4e-05     0.073      21      75 ..     102     154 ..      98     156 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.78
      TPR_12 57 algryeeAlelleeala 73
                ++ +++  ++ +eea++
  EPX73875.1 19 KQQKPQSIEDVFEEAIE 35
                45566666666666654 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.25
      TPR_12 18 rydeAlellekaleiarrllGpdhpltattlrnLgrl 54
                + +++ +++eka  ++ ++l  ++ +   + +n +rl
  EPX73875.1 46 DPEKCYRFYEKASKAYDEYLSVKS-NDFDAWFNKARL 81
                678888899999998888776655.555555555555 PP

  == domain 3  score: 13.4 bits;  conditional E-value: 2.4e-05
      TPR_12  21 eAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealaia 75 
                  +++l++kal + +++  + + ++a+t   L++ + ++g+ + A+ + + al+++
  EPX73875.1 102 SSIDLHKKALSLETNS--EAYFNLAQTHKFLAENCTESGNEQLAVLHIQSALDAC 154
                 6899*********999..89999*****************************987 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.1     0.086   2.6e+02       5      32 ..      10      38 ..       6      46 .. 0.72
   2 ?    4.9   0.0      0.02        59      17      44 .]      54      81 ..      50      81 .. 0.92
   3 ?    1.2   0.0       0.3     9e+02      17      43 ..     100     125 ..      95     126 .. 0.78
   4 ?   -0.5   0.0       1.1   3.2e+03       3      11 ..     261     269 ..     255     278 .. 0.68
   5 ?   -0.5   0.2         1   3.1e+03      27      27 ..     333     333 ..     304     363 .. 0.58

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.086
      TPR_14  5 lalaealla.lGdpdeAiallrralalaP 32
                ++ a+a  a +++p+  ++++++a+++  
  EPX73875.1 10 REVAKAKKAkQQKPQSIEDVFEEAIEQEE 38
                56666754427789************975 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.02
      TPR_14 17 pdeAiallrralalaPddaeawlllaql 44
                +++A ++++++l+   +d +aw+  a+l
  EPX73875.1 54 YEKASKAYDEYLSVKSNDFDAWFNKARL 81
                799*********************9996 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.3
      TPR_14  17 pdeAiallrralalaPddaeawlllaq 43 
                 ++ +i+l ++al+l  ++ ea++ laq
  EPX73875.1 100 LQSSIDLHKKALSLE-TNSEAYFNLAQ 125
                 567888999999955.56899999998 PP

  == domain 4  score: -0.5 bits;  conditional E-value: 1.1
      TPR_14   3 allalaeal 11 
                 a+l+l++++
  EPX73875.1 261 AWLDLLQVY 269
                 677777776 PP

  == domain 5  score: -0.5 bits;  conditional E-value: 1
      TPR_14  27 a 27 
                 a
  EPX73875.1 333 A 333
                 2 PP

>> Sel1  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.2   0.00055       1.7      21      35 ..      43      59 ..      36      62 .. 0.83
   2 ?   -0.7   0.0      0.88   2.6e+03       1      11 [.     117     125 ..     117     150 .. 0.85
   3 ?   -2.7   0.0       3.7   1.1e+04      21      34 ..     195     208 ..     191     210 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00055
        Sel1 21 k..DpekAiewyekAAe 35
                +  Dpek++++yekA +
  EPX73875.1 43 WrlDPEKCYRFYEKASK 59
                456************97 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.88
        Sel1   1 aeAmyrLGmfy 11 
                 +eA+++L+  +
  EPX73875.1 117 SEAYFNLA--Q 125
                 799****9..5 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 3.7
        Sel1  21 kDpekAiewyekAA 34 
                 +D+++Ai++  +AA
  EPX73875.1 195 ADEDSAIQLGDLAA 208
                 48899998866666 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0         6   1.8e+04      24      29 ..      30      35 ..      27      37 .. 0.69
   2 ?    2.5   0.4     0.073   2.2e+02      17      33 ..      54      70 ..      54      71 .. 0.90
   3 ?    4.5   0.0     0.017        49       2      14 ..      73      85 ..      72      85 .. 0.90
   4 ?    3.8   0.0     0.027        80       2      14 ..     118     130 ..     117     133 .. 0.87
   5 ?   -2.9   0.0       3.9   1.2e+04       2      12 ..     260     270 ..     260     271 .. 0.85
   6 ?   -2.0   0.0         2   6.1e+03       8      15 ..     338     345 ..     332     352 .. 0.53
   7 ?   -1.3   0.1       1.2   3.6e+03      18      29 ..     385     396 ..     384     397 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 6
                HHHHHH CS
       TPR_8 24 yekale 29
                +e+a+e
  EPX73875.1 30 FEEAIE 35
                777776 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.073
                HHHHHHHHHHHHHHHHH CS
       TPR_8 17 yeeAkeyyekaleldpd 33
                ye+A ++y ++l+ + +
  EPX73875.1 54 YEKASKAYDEYLSVKSN 70
                89**********99877 PP

  == domain 3  score: 4.5 bits;  conditional E-value: 0.017
                CHHHHHHHHHHHT CS
       TPR_8  2 eayynlgsiylkl 14
                +a++n++++yl++
  EPX73875.1 73 DAWFNKARLYLNM 85
                79********986 PP

  == domain 4  score: 3.8 bits;  conditional E-value: 0.027
                 CHHHHHHHHHHHT CS
       TPR_8   2 eayynlgsiylkl 14 
                 eay+nl+++++ l
  EPX73875.1 118 EAYFNLAQTHKFL 130
                 89*******9987 PP

  == domain 5  score: -2.9 bits;  conditional E-value: 3.9
                 CHHHHHHHHHH CS
       TPR_8   2 eayynlgsiyl 12 
                 +a++ l ++y+
  EPX73875.1 260 QAWLDLLQVYD 270
                 699*****997 PP

  == domain 6  score: -2.0 bits;  conditional E-value: 2
                 HHHHHHTT CS
       TPR_8   8 gsiylklg 15 
                 g++ + l+
  EPX73875.1 338 GQAAKALK 345
                 55544443 PP

  == domain 7  score: -1.3 bits;  conditional E-value: 1.2
                 HHHHHHHHHHHH CS
       TPR_8  18 eeAkeyyekale 29 
                 ++Ak  ye+a +
  EPX73875.1 385 NNAKVMYERAYK 396
                 7999****9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (444 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       937  (0.0522617); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 3438.56
//
Query:       EPX73876.1  [L=260]
Description: NADH-dependent flavin oxidoreductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.9e-34  118.4   3.3    4.8e-34  117.7   3.3    1.4  1  Flavin_Reduct  Flavin reductase like domain


Domain annotation for each model (and alignments):
>> Flavin_Reduct  Flavin reductase like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.7   3.3   2.7e-38   4.8e-34       1     154 [.      48     229 ..      48     230 .. 0.85

  Alignments for each domain:
  == domain 1  score: 117.7 bits;  conditional E-value: 2.7e-38
                    HTTS-EE-EEEEE.EETTEEEEEEESSEEEEETTT.TEEEEEEETTSHHHHHHHHHSEEEEEEEBCCGHHHHHHTCS................... CS
  Flavin_Reduct   1 mrrvaqpvavvttsvpptsplgatlssftslsldP.plvafslrlpsstadalkeagefvinllsesqealadafsqksg................ 79 
                    mrr+aqpv+++++  p ++ +++t+ssft++sl+P p+v+f+l+ ps+ta+a+ +++++v++lls s     ++ s  s+                
     EPX73876.1  48 MRRFAQPVVILSSGFPNGQHAAMTASSFTPVSLSPnPIVSFNLKVPSRTASAILQSQRVVVHLLSSSILRHSQWASILSRpnhpsifpspdlssps 143
                    9*******************9*********************************************887777777775555568888888888888 PP

                    .........SCCCCCCCCCCCEEECTCCCSEEETTCSEEEEEEEEEEECCTTEEEEEEEEEEEEESTTECTT..BEECCCCCEEEE CS
  Flavin_Reduct  80 .........prtddksifagltweesptgapallgalasleCqvvgsvelgdhelfigeVvavkvgddadee..pLlywrrryagl 154
                             +   ++ ++++ + + s++g+p ll++l+ l+C +++s++++dh lf++ V +v++g+   ++  +L+y++r+y+++
     EPX73876.1 144 sppnssghsHGSTHSHSLSPSEVSFSKEGVPHLLDSLGLLHCSILQSIPVQDHLLFLASVNRVEHGSIPLSQstGLVYYNREYCSI 229
                    87776655533333334555555555****************************************995555558*********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       451  (0.0251548); expected 358.6 (0.02)
Passed bias filter:                      264  (0.0147247); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 2070.02
//
Query:       EPX73877.1  [L=157]
Description: dual specificity phosphatase Stp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-46  157.4   0.0    3.3e-46  157.2   0.0    1.0  1  LMWPc     Low molecular weight phosphotyrosine protein phosph


Domain annotation for each model (and alignments):
>> LMWPc  Low molecular weight phosphotyrosine protein phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.2   0.0   1.8e-50   3.3e-46       1     141 [.       7     151 ..       7     152 .. 0.98

  Alignments for each domain:
  == domain 1  score: 157.2 bits;  conditional E-value: 1.8e-50
                 EEEEESSSSSHHHHHHHHHHHHHHHTT-CCCE.EEEEEESTST.TT-B--HHHHHHHHHTTS--TT-BB-BS-HHHHHHSSEEEESSHHHHHHHHHHCC CS
       LMWPc   1 vlfvClgNicRSpmAealfrkelekagleekv.evdSaGtgal.vgkradpravevlkekgislsghvarqlskeelaelDlilamdeenkreleslap 97 
                 vlfvClgNicRSpmAea+fr+e+ekag++e++  +dS+Gtga+ vg+ +dpr+v+vl  +gi+++ hvar+l+  +++++D+i+amd++n+++++++ p
  EPX73877.1   7 VLFVCLGNICRSPMAEAVFRDEVEKAGVSEHFeIIDSCGTGAWhVGSWPDPRTVDVLFANGIHTD-HVARKLKLTDFKKFDYIFAMDRSNLQNIKRVCP 104
                 89******************************4579*****************************.********************************* PP

                 TTGGGGEEEGGGG...SSTSS---HTTSSHHHHHHHHHHHHHHHHHH CS
       LMWPc  98 ekekakvkllgey...teqldieDPyygeieafeevldeieeavkkl 141
                 + +k ++ l+g+y   + ++++eDPyyg++++f+ +++++ ++++++
  EPX73877.1 105 SDAKTHISLFGDYgsaGVSKIVEDPYYGGDDGFQLCYEQLVDFSRNF 151
                 *999**********9999**************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       417  (0.0232584); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.29s 00:00:00.86 Elapsed: 00:00:00.54
# Mc/sec: 872.32
//
Query:       EPX73878.1  [L=163]
Description: hypothetical protein SOCG_03097 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       421  (0.0234815); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.28s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 1139.76
//
Query:       EPX73879.1  [L=934]
Description: P-type proton ATPase Pma1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.4e-42  143.1   3.0    6.4e-42  143.1   3.0    3.0  3  E1-E2_ATPase     E1-E2 ATPase
    2.4e-20   73.7   0.0    5.4e-20   72.6   0.0    1.6  1  Hydrolase        haloacid dehalogenase-like hydrolase
    4.6e-10   39.0   0.0    9.6e-10   38.0   0.0    1.5  1  Cation_ATPase_N  Cation transporter/ATPase, N-terminus
     0.0062   16.3   0.1     0.0062   16.3   0.1    2.0  2  Hydrolase_3      haloacid dehalogenase-like hydrolase
  ------ inclusion threshold ------
      0.048   13.7   0.0       0.11   12.6   0.0    1.5  1  Cation_ATPase    Cation transport ATPase (P-type)
       0.77   10.1   6.8        3.4    8.0   0.6    3.4  3  Comm             Commissureless
        0.9    9.1   6.3        1.5    8.5   6.3    1.2  1  GET2             GET complex subunit GET2
        2.4    8.2   0.0        2.4    8.2   0.0    2.7  3  Ac76             Orf76 (Ac76)
          3    8.0   7.3        8.2    6.6   0.3    3.0  2  DUF2613          Protein of unknown function (DUF2613)


Domain annotation for each model (and alignments):
>> E1-E2_ATPase  E1-E2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.1   3.0   3.2e-45   6.4e-42       4     181 .]     190     369 ..     187     369 .. 0.97
   2 ?    3.3   0.0     0.025        51      53      80 ..     568     595 ..     557     603 .. 0.89
   3 ?   -4.2   1.1       5.1     1e+04     124     154 ..     846     874 ..     840     884 .. 0.55

  Alignments for each domain:
  == domain 1  score: 143.1 bits;  conditional E-value: 3.2e-45
                   --EEEEE-TTS-EEEEGGG--TTSEEEEETT-B--SEEEEEEE-S..EEE-TTTS---S-EE-G-TTEE-TT-EEEE-EEEEEEEE-TTTSTTTTTS CS
  E1-E2_ATPase   4 pptakvirdgteeeidakelvpGDivllkagdrvpaDgrivegsa..evdesaLTGEslpvekekgdmvfsGtvvvsgeakavVtatgedtelgkia 98 
                   + +a v+rdg ++e++a+e+vpGDi+ + +g ++ aDgriv+++   +vd+sa+TGEsl+vek ++d  ++++ v++ge  +vVt+tg +t++g++a
    EPX73879.1 190 ALKAVVMRDGHIQEVEANEVVPGDILHMDEGTIICADGRIVSENVhiQVDQSAITGESLAVEKGQNDPTYASSGVKRGEGFMVVTHTGDSTFVGRAA 286
                   5689999*************************************99*************************************************** PP

                   TTS--------HHHHHHHHHHHHHHHHHHHHHHHHHHS-STTTSSTTHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHT CS
  E1-E2_ATPase  99 rlveeakskktplqkkldklgkvlvpvvlliallvflialllgkslaeallralallvaaiPcaLplavplalalgarrlakk 181
                   +lv++a+  + ++++ l+ +g vl ++vl+ ++ ++ +a+++   +a+ l  +la+ ++ +P +Lp++v++++a+ga+ la+k
    EPX73879.1 287 ALVNAASGGTGHFTEVLNGIGTVLLVLVLFTLFCIYTAAFYRSVRIARLLEYTLAITIIGVPVGLPAVVTTTMAVGAAYLAQK 369
                   ******************************9999999999999999888888**************************99976 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.025
                   TTTS---S-EE-G-TTEE-TT-EEEE-E CS
  E1-E2_ATPase  53 saLTGEslpvekekgdmvfsGtvvvsge 80 
                    +LTG+++ + ke+  ++ +Gt++++ e
    EPX73879.1 568 KMLTGDAVDIAKETARQLGMGTNIFNAE 595
                   69*********************99865 PP

  == domain 3  score: -4.2 bits;  conditional E-value: 5.1
                   HHHHHHHHHHHHS-STTTSSTTHHHHHHHHH CS
  E1-E2_ATPase 124 pvvlliallvflialllgkslaeallralal 154
                   +v +l+++++++ ++  g++  ++++ +l +
    EPX73879.1 846 VVDILATIFCIFGWFKGGHQ--TSIVAVLRI 874
                   33444555555555555554..555555554 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.6   0.0   2.7e-23   5.4e-20       2     210 .]     386     659 ..     385     659 .. 0.80

  Alignments for each domain:
  == domain 1  score: 72.6 bits;  conditional E-value: 2.7e-23
                 SEEEEESBTTTBCHH.....HHHHHHHHHH....CHHHHHHHHHH....HHCHHHHHHHHHHHHH.....................HHHHHHHHHETTT CS
                 xxxxxxxxxxxxxxx.....xxxxxxxxxx....xxxxxxxxxxx....xxxxxxxxxxxxxxxx.....................xxxxxxxxxxxxx RF
   Hydrolase   2 ktvvfDkdGTLttge.....psvedvivsa....alalaaaletg....sehpigkalvaaakar.....................sgaltgfatfigr 66 
                 ++++ Dk+GTLt+ +     p    ++vs     +l l a l+ +       pi k + +a k+                      s            
  EPX73879.1 386 EVLCSDKTGTLTKNKlslgeP----FTVSGvtgdELVLTACLAASrkrkGLDPIDKSFLKALKNYpgpknalskykvlqfqpfdpvS------------ 468
                 68999*******888533332....44444444457777777777777788899999999999996664555544444444444444............ PP

                 E..............HHHHTHHHHHHHH.........HCHHHHHHHHHHHHHHCHHHHHH.......TTHHHHHHHHHHTHHBHTTHHHHHHHHHHTTE CS
                 x..............xxxxxxxxxxxxx.........xxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  67 g..............ayaigkpewltal.........dippdlgaaigsaqsqgrtvall.......qaralavftiadplkvkpeaaeavasLkaagi 135
                                + a+g p w+ ++         +i + +++++g++ s+g  +  +       + ++ ++   +dp  +++++  ++ + k+ g+
  EPX73879.1 469 KkvtayvespegkriTCAKGAPLWILKMveeshaideEILKAYKDKVGDLASRGYRSLGVarkfdgeNWQIMGIMPCSDP--PRDDTGRTIGEAKRLGL 565
                 055555555555699*************988888888888888888888888888888889999887779**********..***************** PP

                 EEEEEESSEHHHHHHHHHHTT..GGGESEEEEHHCES.................STTTSHHHHHHHHHHHTSTGGGEEEEESSHHHHHHHHHTT CS
                 xxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxx.................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 136 evvlltgdnpetaeraanqlG..ddyfdaviasdiet.................vakpspegkvaaireLqgkpeevamVGDgvnDaaalaaAg 210
                 +v +ltgd    a+++a+qlG   ++f+a+  +++ +                 ++++ p++k a ++ Lq ++  vam GDgvnDa+ l++A+
  EPX73879.1 566 RVKMLTGDAVDIAKETARQLGmgTNIFNAEQLGITGGgtmpgnevydfveaadgFGEVFPQHKFACVDILQQRGYLVAMTGDGVNDAPSLKKAD 659
                 **********************98888666666666678888999999999********************99999****************98 PP

>> Cation_ATPase_N  Cation transporter/ATPase, N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.0   0.0   4.8e-13   9.6e-10      13      68 ..      93     147 ..      81     148 .. 0.88

  Alignments for each domain:
  == domain 1  score: 38.0 bits;  conditional E-value: 4.8e-13
  Cation_ATPase_N  13 LetdlenGLtqaeaaerlkkyGpNelkekkkkslwvkllkqftnplvilLlvaalv 68 
                      L+t  ++GL+++e++er+kkyG N++ +++ ++ + k++  f  p+  ++++aa++
       EPX73879.1  93 LQTPIQTGLSSSEVEERRKKYGLNQM-KEEAENPVLKFIMFFVGPIQFVMEAAAAL 147
                      67888*********************.77777777889999*************98 PP

>> Hydrolase_3  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.7      0.69   1.4e+03     102     156 ..      18      75 ..       6      88 .. 0.69
   2 !   16.3   0.1   3.1e-06    0.0062     206     243 ..     642     679 ..     635     691 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.69
                  ESSEEEESTT.THHHHHHHHHCHCTCEEEESHHHHHCHCSESEEE...EES-HHHHHH CS
  Hydrolase_3 102 tedkvyvlnkeksekkkkeeektkkkkeeidseeeledeeiakil...ilkdkeklde 156
                  +e++v ++++e + ++++++   ++  +++ se+e++de+i  ++   +++d ++ +e
   EPX73879.1  18 SERQVPYEHEEDEVSQQEQQAPAASAPQQDPSEDEEPDENIDELIeelFSEDVHEEQE 75 
                  5566666667677777777777888888888888899999998887654444444333 PP

  == domain 2  score: 16.3 bits;  conditional E-value: 3.1e-06
                  EEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEE CS
  Hydrolase_3 206 viafGDgeNDieMLeaaglgvAmgnaseevkkaAdyvt 243
                  v+  GDg ND + L++a++g+A++ a++ + +aAd v 
   EPX73879.1 642 VAMTGDGVNDAPSLKKADTGIAVEGATDAARSAADIVF 679
                  5667*******************************997 PP

>> Cation_ATPase  Cation transport ATPase (P-type)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   5.3e-05      0.11      23      87 ..     434     496 ..     424     499 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 5.3e-05
  Cation_ATPase  23 ktEsALlvlaeklgldteelreetkkvqeipFnssrKrmsvvlklepekkvrlyvKGApeiilkr 87 
                    + + + l++ ++    ++++ +++k +q  pF+ + K  + +++  pe+k +   KGAp  ilk 
     EPX73879.1 434 PIDKSFLKALKNY-PGPKNALSKYKVLQFQPFDPVSKKVTAYVES-PEGKRITCAKGAPLWILKM 496
                    5667777888888.88899999***************99999987.9************999985 PP

>> Comm  Commissureless
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.6    0.0017       3.4      12      37 ..     306     331 ..     298     356 .. 0.89
   2 ?    0.8   0.3      0.29   5.8e+02      13      29 ..     842     858 ..     834     861 .. 0.87
   3 ?    2.4   0.0     0.098     2e+02      13      55 ..     869     916 ..     864     933 .. 0.53

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0017
        Comm  12 igivltLlilslvFclcsCflyrkfr 37 
                 ig vl +l+l+++Fc+++  +yr+ r
  EPX73879.1 306 IGTVLLVLVLFTLFCIYTAAFYRSVR 331
                 8999999************9999876 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.29
        Comm  13 givltLlilslvFclcs 29 
                 g+vl++ il+++Fc++ 
  EPX73879.1 842 GAVLVVDILATIFCIFG 858
                 8999999********96 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.098
        Comm  13 givltLlilsl.vFclcsCfly.....rkfrtWkkkktardakstrans 55 
                 ++vl + i s+ vFc+++   y     + f +W ++k +r+++ +r+ +
  EPX73879.1 869 VAVLRIWIYSFgVFCIMAGVYYilsesTAFDRWMNGK-PRESRDKRSVE 916
                 44555555543367766633332222257999*9554.55555555544 PP

>> GET2  GET complex subunit GET2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   6.3   0.00073       1.5      65     151 ..      18     102 ..       2     134 .. 0.55

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00073
        GET2  65 ssas...ehddpeiediseiavkpkktasskkksplseesepeapqldqllkqllqqqqqgnsensqdaesstP.dlfsqllkmmkqgegg 151
                 s+++   eh++ e+++ ++ a+     as ++++p+++e ep+ +++d+l+++l++++  +++e+++++  + +  + ++ll+   q++ +
  EPX73879.1  18 SERQvpyEHEEDEVSQQEQQAP----AASAPQQDPSEDE-EPD-ENIDELIEELFSEDVHEEQEEQEETAAGEAkPVPEELLQTPIQTGLS 102
                 2222455677777766444422....2333444444443.454.49**********97776666665555554422334466665554444 PP

>> Ac76  Orf76 (Ac76)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.8      0.28   5.6e+02      27      45 ..     309     327 ..     300     332 .. 0.75
   2 ?   -3.9   0.6       7.2   1.4e+04      25      31 ..     733     739 ..     713     754 .. 0.53
   3 ?    8.2   0.0    0.0012       2.4      32      74 ..     877     920 ..     845     925 .. 0.78

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.28
        Ac76  27 lltllllfvlFiillnvyy 45 
                 +l +l+lf lF i    +y
  EPX73879.1 309 VLLVLVLFTLFCIYTAAFY 327
                 5678888888887666666 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 7.2
        Ac76  25 ellltll 31 
                 el++++ 
  EPX73879.1 733 ELIVFIA 739
                 2333222 PP

  == domain 3  score: 8.2 bits;  conditional E-value: 0.0012
        Ac76  32 llfvlFiillnvyyikteStpad.lytekakkikKkrdledafD 74 
                   f +F i+  vyyi  eSt+ d  +++k ++ + kr +ed   
  EPX73879.1 877 YSFGVFCIMAGVYYILSESTAFDrWMNGKPRESRDKRSVEDLVV 920
                 446799999**********975527899**********999765 PP

>> DUF2613  Protein of unknown function (DUF2613)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   2.0     0.064   1.3e+02      10      32 ..     343     365 ..     339     379 .. 0.81
   2 ?    6.6   0.3    0.0041       8.2       9      31 ..     772     794 ..     771     802 .. 0.91

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.064
     DUF2613  10 aVaGivlGvvavfgvtavvqqds 32 
                  ++G+ +G+ av++ t++v++  
  EPX73879.1 343 TIIGVPVGLPAVVTTTMAVGAAY 365
                 689*************9998765 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0041
     DUF2613   9 SaVaGivlGvvavfgvtavvqqd 31 
                 S V+Givl++++ ++ t++  q 
  EPX73879.1 772 STVIGIVLAIGTWITNTTMIAQG 794
                 89**************9999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (934 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1081  (0.0602934); expected 358.6 (0.02)
Passed bias filter:                      608  (0.0339115); expected 358.6 (0.02)
Passed Vit filter:                        84  (0.00468515); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.85u 0.35s 00:00:01.20 Elapsed: 00:00:00.51
# Mc/sec: 5461.87
//
Query:       EPX73880.1  [L=261]
Description: DNAJC9 family DNAJ domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-20   72.0   2.5    3.2e-20   72.0   2.5    2.2  2  DnaJ      DnaJ domain
  ------ inclusion threshold ------
      0.073   13.5   4.9       0.19   12.2   0.5    2.6  2  SNase     Staphylococcal nuclease homologue
      0.082   12.5   0.0       0.21   11.2   0.0    1.7  1  THB       Tri-helix bundle domain


Domain annotation for each model (and alignments):
>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.0   2.5   5.4e-24   3.2e-20       1      63 []       6      71 ..       6      71 .. 0.91
   2 ?   -1.9   0.1      0.63   3.8e+03      25      42 ..     166     183 ..     146     196 .. 0.61

  Alignments for each domain:
  == domain 1  score: 72.0 bits;  conditional E-value: 5.4e-24
                HHHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTS..CCHH...HHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ  1 dyYeiLgvskdasedeIkkaYrklalkyHPDkn..pkdp...eaeekFkeineAyevLsdpekRkqYD 63
                ++Ye+L ++kda+++eI++aYrk+al++HPDk   +  +   +a+++F +i+ Ay +Lsd+ kRk++D
  EPX73880.1  6 NPYEVLDIPKDAKSEEIRRAYRKKALRFHPDKVveD--EkkdSARREFDRIAFAYGILSDEHKRKHFD 71
                68*****************************88532..33469999*********************9 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.63
                 HHHHSTTTSCCHHHHHHH CS
        DnaJ  25 alkyHPDknpkdpeaeek 42 
                  + y P  ++k+++ + +
  EPX73880.1 166 FKLYKPNAKSKKKRLRAA 183
                 566677755444433333 PP

>> SNase  Staphylococcal nuclease homologue
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.1     0.033     2e+02       8      40 ..      12      44 ..       9      58 .. 0.82
   2 ?   12.2   0.5   3.2e-05      0.19      35     101 ..     116     190 ..     104     193 .. 0.81

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.033
                E-STSSBTTTTTSTTHHHHHHHHHHHHHHCSSE CS
       SNase  8 daPetakpkktvqpfgkeAkeflkklvlqkkvv 40
                d P+ ak ++   ++ k+A  f  ++v++ +++
  EPX73880.1 12 DIPKDAKSEEIRRAYRKKALRFHPDKVVEDEKK 44
                8899999999************99999865544 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 3.2e-05
                 HHCSSEEEEE-SSBSTTSEEEEEEEET........TEEHHHHHHHTTSSEE---BTT.STTTHHHHHHHHHHHHHT CS
       SNase  35 lqkkvvvleldkkkDkygrllayvyln........kknineeLvkeGlArvyevyek.neekkkellkaeeeAkkk 101
                  +kk v++ ++++k++ + +l +v+++        +++i e+ + +G+    + y++ ++ kkk+l++ae+eA+++
  EPX73880.1 116 EEKKDVLEAYKRRKGSMDGILEEVMCSeisdeerfRHMIDEA-ISQGVVPKFKLYKPnAKSKKKRLRAAEREAQEA 190
                 4456666666669**************9**999977777766.799****999999967889999*********86 PP

>> THB  Tri-helix bundle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   3.5e-05      0.21       8      23 ..      45      60 ..      44      62 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 3.5e-05
         THB  8 kakpkdYEkIafqYGi 23
                ++ + ++ +Iaf YGi
  EPX73880.1 45 DSARREFDRIAFAYGI 60
                77899**********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1980  (0.110436); expected 358.6 (0.02)
Passed bias filter:                      585  (0.0326287); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 1856.49
//
Query:       EPX73881.1  [L=109]
Description: 60S acidic ribosomal protein P2-beta [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.2e-27   95.4  13.0    2.6e-27   95.2  13.0    1.0  1  Ribosomal_60s  60s Acidic ribosomal protein


Domain annotation for each model (and alignments):
>> Ribosomal_60s  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.2  13.0   1.4e-31   2.6e-27       2      88 .]      18     108 ..      17     108 .. 0.80

  Alignments for each domain:
  == domain 1  score: 95.2 bits;  conditional E-value: 1.4e-31
                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXXXX.XX--SS--STTT CS
  Ribosomal_60s   2 ptaenikkvlkaagveveaarvkllvkalegkdieellangaakla....aaaaaaaaaaaaaaaaaaaeekkkeeeeeEeedddmGfgLF 88 
                    p+ ++i++vl+++gveve++rv+ lvk+legk++eel+a+g++kla    ++aaaaa+aaa a+a+aa+e+kk+e+++eEe+d+dmGfgLF
     EPX73881.1  18 PSVSDIENVLSTVGVEVESQRVESLVKELEGKNLEELIAAGNEKLAtvpsGGAAAAAPAAAGADAPAAEEAKKEEAKQEEESDEDMGFGLF 108
                    899*********************************************85444444444444444444444444444449*********** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       931  (0.051927); expected 358.6 (0.02)
Passed bias filter:                      513  (0.0286129); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 791.59
//
Query:       EPX73882.1  [L=534]
Description: SWI/SNF and RSC complex subunit Arp9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.9e-37  127.5   0.0    5.2e-36  124.1   0.0    2.4  1  Actin     Actin
  ------ inclusion threshold ------
      0.077   12.4   0.2      0.077   12.4   0.2    1.9  2  RPOL_N    DNA-directed RNA polymerase N-terminal


Domain annotation for each model (and alignments):
>> Actin  Actin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.1   0.0   5.8e-40   5.2e-36      52     405 ..     111     533 ..       6     534 .] 0.75

  Alignments for each domain:
  == domain 1  score: 124.1 bits;  conditional E-value: 5.8e-40
       Actin  52 altk.rpelevrspvedGvvedwdaveelwehvlkeelkvdp...eehpllltepplnppkqrekalEivfEkfkvpalylaksavlsafasgkstglv 146
                 ++++ +p  +  +p+++G+v+dwda ++ w+h ++  l++ +   +++p+ l  p+  ++ +re a++ +fE+++vpa+ ++ +  + ++a g   glv
  EPX73882.1 111 NIDDwKPLPNEIQPIQKGCVVDWDALRAFWKHLYFIILSTSTeliSQYPVCLLIPTYWSSYDRELATQFFFEELRVPAFTIGYESLMGLYAIGVLHGLV 209
                 4444234445568*************************9996445899*************************************************** PP

       Actin 147 vDsGasvtsvvpVldGyvLkkairrsdlgGkaLteqlkellssknvevtprylikkkkvveaessaekeelekltesyktleeeevleeiKesvcevse 245
                 +D+G+++t ++p+ldG++L  a+++  lgG+ +t ++++l++++     p+ +   k+v        ++ +e   e++k +e ++vl+e +++  e s+
  EPX73882.1 210 IDVGYEKTDITPILDGQILFSATQQILLGGRSMTLHMQKLMQES----LPTLQATGKHVDP------EHVTELFAEQLKCSEITQVLREEQDASKEKSK 298
                 *******************************************6....5555555554432......22233334444444444444444444444444 PP

       Actin 246 dpeg....deekss...........................sspeksYeLPDg.............seiklgeeRfkvpEiLFdpsligsesaleeeks 300
                  +e+    +    +                           + ++++ ++P+                +++g eRfk+ E LF+    +          
  EPX73882.1 299 REEEfyssK----DdegvedigkivatgqtraylarkederNGNKSQRKMPENsevefqtinlspiGDCIVGRERFKACEELFHRPSNY---------- 383
                 444322220....1222333333444444444445555555888888999999999999999988779***************974322.......... PP

       Actin 301 kllgiselivaai..nacdvdlrpeLlanivvtGGnsllpglteRlekelaql......................................askgv... 356
                   ++++e i+ +i  na+d + r++L +ni+v G  s ++g++e l + l+ +                                      +   +   
  EPX73882.1 384 -SVSLPEAIYLTIkhNAVDYNRRNDLWENIIVMGCGSRVRGFREALVQQLQFKyqltgklepyyvaqgtdsligmttnpptpypplinpckT---Lpdy 478
                 .3699********334677777****************************988888999999998888888888777777766666655553...0444 PP

       Actin 357 ..kvkiiapee.erkysaWiGGSiLAslg...tfqqlwvskqEYeEqGssvverk 405
                   + k  a+++      a++GGSi A+++   ++ +  v+  EY  +G+  ++ k
  EPX73882.1 479 fpSWKPDANTNaMFEELAFLGGSIVAKTSfneSVASHYVTFDEYVQSGPTEIHSK 533
                 6778888888777888999999999998744466677899999999998888766 PP

>> RPOL_N  DNA-directed RNA polymerase N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.2   8.5e-06     0.077     111     187 ..      30     108 ..      12     126 .. 0.68
   2 ?   -1.1   1.1      0.11   9.7e+02     123     142 ..     284     303 ..     242     359 .. 0.48

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 8.5e-06
                 .-BHHHHHHHHHHHHHHHHHHHHHHHHHTTT...TTCHHHHHHHHSTSHHHHHHHHHHHHHHHSHSSSTTT-TT..... CS
      RPOL_N 111 gvkvarlaisvGkaveeeyraeqlkkkekkkk..kkkkkkekkvkklkkkkkeakealakekeeekeelkrekaeklae 187
                 g  ++r+ ++vGk+ + ey++ +++++  k++   k++++e+k + l+k +++ +++ a+++e e++++k+e   ++++
  EPX73882.1  30 GPPTVRVRTRVGKNEQGEYIFGNQQEEGIKNEenVKEEESEQKTQTLEKPESHDQPSSASNNEPEEHNQKDEFSPSFQS 108
                 77899***************99999977666654444555556666666666666666666666665555544444444 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.11
                 HHHHHHHHHHHHHHHHTTT. CS
      RPOL_N 123 kaveeeyraeqlkkkekkkk 142
                 + + ee  a++ k+k+++++
  EPX73882.1 284 QVLREEQDASKEKSKREEEF 303
                 22222222222222111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (534 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1414  (0.0788666); expected 358.6 (0.02)
Passed bias filter:                      702  (0.0391544); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.30s 00:00:00.97 Elapsed: 00:00:00.43
# Mc/sec: 3704.09
//
Query:       EPX73883.1  [L=154]
Description: 40S ribosomal protein S15 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.5e-31  108.1   0.0    2.2e-31  107.6   0.0    1.3  1  Ribosomal_S19  Ribosomal protein S19


Domain annotation for each model (and alignments):
>> Ribosomal_S19  Ribosomal protein S19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.6   0.0   1.2e-35   2.2e-31       9      81 .]      61     137 ..      52     137 .. 0.90

  Alignments for each domain:
  == domain 1  score: 107.6 bits;  conditional E-value: 1.2e-35
                    CCCHHHHHHHHHHTS-....----EEES-TT-B--GGGTT-EEEEE-SSSEEEEE--CCCTTSBCGGGT-SS----S CS
  Ribosomal_S19   9 vqesllkkvrkakaek....kkevikthsRdstIlPemvgltvgVynGktfvpveikeemvGhkLgEFspTrkpvkh 81 
                     + +++kk+r+akae     k+ v+kth+R++++lPemvg++vg+ynGk f++vei++em+Gh+LgEFs+++kp++h
     EPX73883.1  61 GASRFIKKLRQAKAEAplneKPAVVKTHLRSMIVLPEMVGSVVGIYNGKLFNQVEIRPEMIGHYLGEFSISYKPTRH 137
                    567899****9995555788******************************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       442  (0.0246528); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1241.06
//
Query:       EPX73884.1  [L=335]
Description: S-adenosylmethionine-dependent methyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0028   17.5   0.0     0.0081   16.0   0.0    1.7  2  Methyltransf_23  Methyltransferase domain
     0.0096   15.7   0.0        1.7    8.3   0.0    2.2  2  Methyltransf_16  Lysine methyltransferase


Domain annotation for each model (and alignments):
>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0      0.76   6.8e+03      90     109 ..      76      95 ..      74      97 .. 0.86
   2 !   16.0   0.0     9e-07    0.0081      10     102 ..     113     258 ..     108     272 .. 0.62

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 0.76
  Methyltransf_23  90 evlehvpdppellrqiatll 109
                      ++le+ p+  +ll+++++l+
       EPX73884.1  76 DSLESTPSELKLLDSANDLV 95 
                      78999999999999999886 PP

  == domain 2  score: 16.0 bits;  conditional E-value: 9e-07
  Methyltransf_23  10 sdklerllpklraggrvLdiGcGtG.illevl.....rengfsvtgvDlspeaveiae...........................kakkaqkdq 70 
                      ++++++l   +r   ++L++GcGt    l+++     r+++ ++++ D +   ++ ++                           +        
       EPX73884.1 113 CHEIKKLNILDRNLTNILELGCGTAlPILSCFqeiyqRREPSTLIFQDYN---IDVLRyitlpnlllnwyfntqehdssqehgtiN-------- 195
                      566666554478889**********8898888544433345588888885...344445578877776655444433344433331........ PP

  Methyltransf_23  71 fdeqeaaepqg.........................................kfdlIvlrevlehvpdppell 102
                                                                          +f lI ++e++++vp+++  +
       EPX73884.1 196 ----------VsenllqefcddfarnsitceflsgpwgpemqniiqqsygshYFSLILASETIYSVPSLEPFI 258
                      ..........022233333333333444555555555555666666666677***************987544 PP

>> Methyltransf_16  Lysine methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.2   0.0    0.0018        16      20      59 ..     104     138 ..      94     165 .. 0.78
   2 !    8.3   0.0   0.00019       1.7     109     145 ..     227     263 ..     192     274 .. 0.76

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.0018
  Methyltransf_16  20 kvWdaavvlvkylekklakelganelsklsvlELGsGtGl 59 
                      k W+ ++ l++ ++k     l+  +++ +++lELG Gt l
       EPX73884.1 104 KTWECSIDLCHEIKK-----LNILDRNLTNILELGCGTAL 138
                      667777776666655.....456788999********977 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00019
  Methyltransf_16 109 eeleedllekeevDlilaaDcvYledslelLvkvLke 145
                      +++ ++   ++ + lila+  +Y   sle+ + +L e
       EPX73884.1 227 QNIIQQSYGSHYFSLILASETIYSVPSLEPFIYMLLE 263
                      455677778899*****************99988865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (335 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       500  (0.0278878); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2530.00
//
Query:       EPX73885.1  [L=171]
Description: signal peptidase subunit Spc2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.8e-32  111.0   0.1    5.3e-32  110.8   0.1    1.0  1  SPC25     Microsomal signal peptidase 25 kDa subunit (SPC25)
     0.0076   16.6   0.9       0.01   16.1   0.9    1.2  1  DUF3021   Protein of unknown function (DUF3021)


Domain annotation for each model (and alignments):
>> SPC25  Microsomal signal peptidase 25 kDa subunit (SPC25)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.8   0.1     6e-36   5.3e-32       1     160 [.       8     163 ..       8     165 .. 0.91

  Alignments for each domain:
  == domain 1  score: 110.8 bits;  conditional E-value: 6e-36
       SPC25   1 elKntlDdalkeyltdlgfkeshtltdvrLalGylavaiaavaflydykveFeeskpvlaiavvlYfilsgiltlystfvekntifvgkrktgskriek 99 
                 e K  +D a+ e+++++g+k+sh+++++r+++G+ + + aa+af ++ +++F++ k  l+ ++++Yf++sg+lt+++ fv++n i++g++++++    +
  EPX73885.1   8 EFKTNFDTAFIEFFNKKGYKQSHFVDNIRFLFGFGCAIPAAIAFGLEQLHDFSKLKEHLLCLLLVYFTFSGLLTWWISFVKGNRIYIGTSPDQKL---T 103
                 56999****************************************************************************************66...6 PP

       SPC25 100 itissslkk.lsptytltvsykdksnkgkslkakeleksvgewFdedGylveeefeqwlakl 160
                 i  +++l+  ++p  +ltv+ k+ +++  +++a++l+ +v+++Fd++G++ + +f++ +++l
  EPX73885.1 104 IDAETTLPLnHNPHLNLTVRIKRGKQA--TSIAHKLSVPVTDIFDQEGQISQAAFSKHISNL 163
                 666776664366999999999887765..5555569*********************99987 PP

>> DUF3021  Protein of unknown function (DUF3021)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.9   1.2e-06      0.01      24     100 ..      20      93 ..      11      97 .. 0.77

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.2e-06
     DUF3021  24 lfsgettllestavlkqvllsaliGvlfalasli.feserlsllkqtlihflvvlllvllla.lllgWfplsvigiliv 100
                 +f+++++  + ++++ ++   +l+G+++a++ +i f  e+l   +++  h+l++ll++++++ ll +W+++ v+g  i+
  EPX73885.1  20 FFNKKGY--KQSHFVDNI--RFLFGFGCAIPAAIaFGLEQLHDFSKLKEHLLCLLLVYFTFSgLLTWWISF-VKGNRIY 93 
                 4444443..566666665..5789******************************99999999677778776.6666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       546  (0.0304535); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1375.74
//
Query:       EPX73886.1  [L=309]
Description: hypothetical protein SOCG_03105 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.1e-13   48.9   0.4    8.1e-13   48.2   0.4    1.3  1  SIL1      Nucleotide exchange factor SIL1


Domain annotation for each model (and alignments):
>> SIL1  Nucleotide exchange factor SIL1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.2   0.4   4.5e-17   8.1e-13      15     241 ..      47     273 ..      37     296 .. 0.75

  Alignments for each domain:
  == domain 1  score: 48.2 bits;  conditional E-value: 4.5e-17
        SIL1  15 llklsssdverlekaLddlielshDykfGvkiishefell.knlslndklpvelrelsariigssLRNNpeavenvlekkpefvkelfeelselskkks 112
                  l ++ ++++ l++ L++l +lshDy fG ++++++ +    n++ n ++p  +r+l++++ +s   NNp + e  ++  ++++   ++ l++  + + 
  EPX73886.1  47 SL-SNTENIQFLDSSLETLRDLSHDYSFGQEVVKSDIKDHlINFMNNLSYPEATRSLASSVFASAFANNPAVHELAVK--DNLMPLFIQSLKH--EPSI 140
                 44.35789999**********************99986544999**************************99997665..4566666677755..2344 PP

        SIL1 113 dvliKRylsilqeLlqnsefvtkyekkskletLieiy.ei.kdkqiki...kvlelledllleeee.ksevkkrsaeeeeedvqewaselskfiq..dk 203
                 +v++K  l+ l++ + ++ +++++ + s+++  +++y ++ + ++++i   k  +ll ++    e+ + +++k s+ + +  v++w+  l++ +q   +
  EPX73886.1 141 SVITK-KLYLLSKAVASTWSAQSFVQCSGMDIVSDLYsKWlEIPNSNIpfhKYEQLLGRIAILLESlHLHLSKYSKVT-DGLVSDWCYLLQSQVQsnWS 237
                 55555.567777777777788888778899999999954433344443223666777776655544455566655444.44799***********5434 PP

        SIL1 204 eidelhvrkfFnsLveikkefkkdlkvsseFlnWLake 241
                 + +   ++ + +++v+++ e   ++ +s  F +WL+++
  EPX73886.1 238 SYSPTTLELLLHTIVSMQVE--WEVCPSTVFYEWLNDD 273
                 56788999*********998..69***********876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (309 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       548  (0.030565); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.21s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 2410.94
//
Query:       EPX73887.1  [L=1021]
Description: TFIIH regulator [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.2e-88  297.2  10.2    2.2e-88  297.2  10.2    2.5  3  MMS19_C        RNAPII transcription regulator C-terminal
    7.1e-73  245.4   0.5    7.1e-73  245.4   0.5    3.3  4  MMS19_N        Dos2-interacting transcription regulator of RN
    0.00015   20.8   0.3    0.00028   19.9   0.3    1.4  1  TraG_N         TraG-like protein, N-terminal region
  ------ inclusion threshold ------
      0.032   14.8   1.1         16    6.2   0.0    5.0  4  Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
      0.071   13.4   2.0         10    6.5   0.0    3.4  3  HEAT_UF        Repeat of uncharacterized protein PH0542
       0.16   12.2   4.4          3    8.1   0.0    4.4  4  RTP1_C1        Required for nuclear transport of RNA pol II C


Domain annotation for each model (and alignments):
>> MMS19_C  RNAPII transcription regulator C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0      0.99     3e+03     346     366 ..      54      74 ..      39     105 .. 0.60
   2 ?   -1.0   1.3      0.24   7.2e+02     227     294 ..     222     310 ..     219     334 .. 0.65
   3 !  297.2  10.2   7.5e-92   2.2e-88      13     422 ..     540     955 ..     525     956 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 0.99
     MMS19_C 346 setkenyLvALshllkhvPks 366
                  + ++  L  Ls++l+ +Pk+
  EPX73887.1  54 VSMRAKALLLLSQVLEGLPKD 74 
                 334444444444444444443 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.24
     MMS19_C 227 kd.edlselldellesieeslieaedsqerkaaleiliwitKALvlRghplatelldkLle.....................lLs.edael 294
                 +d + l   +d+l+e+++++li+  ++  ++  l  l+  +KA  +R +  a ++ ++  +                     +L+ +d  l
  EPX73887.1 222 PDaQALTITTDDLKEQLQNTLIA--TDAFSHLLLPELFKKLKASAVRVKVDALKIFTQACQhwhpnsylwscadywesikqeILEsTDTTL 310
                 55577888888888999999888..888888888888889999999988888888888888444444444444444444444333344444 PP

  == domain 3  score: 297.2 bits;  conditional E-value: 7.5e-92
     MMS19_C  13 easasayervLeaLaelssekqlfetlvirllnkl.dlvlksnessaayahailstllkllekkqtdlekeellnsyydrivprlltlvvsaastsssi 110
                 +a+++a+++ L++L ++s+ek+lf+ lvirl++ l d+++ ++++ + +  ++l++l+ ++++++  +++ +++ +y +++vp+l+t ++++a+     
  EPX73887.1 540 SAEDTAFRHSLHILMTVSEEKSLFKALVIRLIEVLkDHFNAAKNE-SYFTSIVLQNLCLAFRNRN--IQNRDDVPFYLESLVPWLYTISFKYAPM---F 632
                 333444*****************************6555555554.66677**************..**************************95...9 PP

     MMS19_C 111 ltddrllevlgriinlivrslssskqqevleevvalfltgdask.............kfeplsesasesqkqliilftailaalrkevkl.pdlsell. 194
                   + + l+ +++iin i+r+++ ++q ++ +++ +l++t+d+s              +f+  +   +++   l++l++  +++l++ v++  dl+ +l 
  EPX73887.1 633 VLSIKDLTSISQIINEIIRVCPLQNQISFSDDLRKLYFTNDQSNliqddmsvkeiasQFSFEKAIIDQKYAGLVLLLQGGMNGLQRLVPIvRDLHVTLl 731
                 ****************************************9999777777666666544443344444555555****************988887774 PP

     MMS19_C 195 nellellaseaespflrlaylrllallvNKflkdedlselldellesieeslieaedsqerkaaleiliwitKALvlRghplatelldkLlelLsedae 293
                 n++++ ++++a+ p   l++lrll++l+NK+ kded++++l+++  + + ++ ++ d  ++k  ++il wi+KALv R h++a++++++Ll++L    e
  EPX73887.1 732 NSCVD-TVEKATIPAVILSALRLLSSLLNKCSKDEDINSFLQSATVKSSYEKAKSGDRGQSKVGVQILSWIAKALVSRKHQSADNVVNYLLDCLH--LE 827
                 77777.**********************************9988777766666677**************************************6..88 PP

     MMS19_C 294 lgqlvakafgvlvsddevvlskknhanirlLykQrfFstvlpklvegfkssdsetkenyLvALshllkhvPkslllpeLptLlPlLlqaLdlpdaevka 392
                  ++ v  +f+v++ dd+  l+k+nh+  r+LykQ+f+ +v+pkl+e++++ +s++k++yL+ Ls ++ +vP+++++p++pt+lPlLlq+L l+d  vk+
  EPX73887.1 828 DATPVVTGFAVIIRDDPA-LNKTNHNIERILYKQKFYVEVMPKLLEAIREVTSKEKPFYLMVLSIVIGNVPEDVVIPDMPTVLPLLLQCLVLEDIGVKY 925
                 899***************.******************************************************************************** PP

     MMS19_C 393 stLetlksileespslvsehlssLvprLLk 422
                 s+L+++  +++e psl+s++++sL+p+LL+
  EPX73887.1 926 SALNVIMTAIKEMPSLISDYMNSLIPSLLT 955
                 ****************************97 PP

>> MMS19_N  Dos2-interacting transcription regulator of RNA-Pol-II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  245.4   0.5   2.4e-76   7.1e-73       1     260 [.      42     303 ..      42     304 .. 0.98
   2 ?    1.1   0.0      0.08   2.4e+02       6     110 ..     301     412 ..     300     419 .. 0.72
   3 ?   -0.7   0.0      0.28   8.4e+02      12      68 ..     787     840 ..     727     881 .. 0.70
   4 ?   -1.7   0.0      0.58   1.7e+03     207     252 ..     906     950 ..     905     954 .. 0.84

  Alignments for each domain:
  == domain 1  score: 245.4 bits;  conditional E-value: 2.4e-76
     MMS19_N   1 veaLgeyLtseddkvRakavslLaevlsrlpkkklseeevevLvqFflsrledfavlkealkgllaLlrlkkfsaeeavevlralfeevhvqslaqadR 99 
                 v+++g+yLt+++ ++Raka++lL++vl+ lpk++l+ ++v+vL+qF+l+rl+d+ +l e   g++aLl++++f+a ++vev+  +f+++++++++q++R
  EPX73887.1  42 VTSIGDYLTNTNVSMRAKALLLLSQVLEGLPKDRLPVKHVSVLIQFYLNRLDDEVTLTENSLGIAALLHMDNFPAPKVVEVCYCYFDATDMPKYSQKTR 140
                 7899***************************99****************************************************************** PP

     MMS19_N 100 klvyelldallekhreal.kelgedflegfvelvdgEkDPrnLllvfellkvllrefdlsalaeelFdvvscYFPitFrpppndp.ygitredLkaaLr 196
                 +++++++d +++++  ++  ++++ f+ g+++ + gEkDPrnL lvf++l+++l+ f+++ + +++Fd+ +cYFPitFr pp+ +   it++dLk++L+
  EPX73887.1 141 YSILKIFDIIIDEYLFDIsPQTKDAFFAGICTTFAGEKDPRNLFLVFSMLQKILKRFPIGGFEKQFFDIAYCYFPITFRAPPDAQaLTITTDDLKEQLQ 239
                 **************9999667777*******************************************************99987769************ PP

     MMS19_N 197 eclaasplfaplalplllekLdstsvsakldaLqtlaacveaygaeavaehlralwsalkkeil 260
                 ++l+a+++f++l+lp l++kL+++ v++k daL++ +++++ ++++++   + + w+++k+eil
  EPX73887.1 240 NTLIATDAFSHLLLPELFKKLKASAVRVKVDALKIFTQACQHWHPNSYLWSCADYWESIKQEIL 303
                 ***************************************************************8 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.08
     MMS19_N   6 eyLtseddkvRakavslLaevlsrlp.kkklseeevevLvqFflsrle..dfavlkealkgllaLlrl.kkfsaee....avevlralfeevhvqslaq 96 
                 e+L s+d++  + a++ L+ ++++l  ++ ls++ +++L   +++ +e   ++ + ++++++ a++ +  ++s e+      + lr+++ ++ ++s + 
  EPX73887.1 301 EILESTDTTLQNTALNALNILAKNLYkENGLSSNFTDFLDIVITQSFEnfSKDFTVKIASAMGAVFAAvASVSVESfnycSDKHLRQII-HLPMESETL 398
                 78999999999999999999999996588999999999988888888866666677777777777744123333334444555666666.577888888 PP

     MMS19_N  97 adRklvyelldall 110
                 ++R+ ++ +l++++
  EPX73887.1 399 EKRHGMLIFLNYMF 412
                 88888888888776 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.28
     MMS19_N  12 ddkvRakavslLaevlsrlpkkklseeevevLvqFflsrledfavlkealkgllaLl 68 
                 d  + + +v++L+ ++++l +   ++++++ +v+++l+ l  ++++ +++ g++ ++
  EPX73887.1 787 DRGQSKVGVQILSWIAKALVS--RKHQSADNVVNYLLDCLHLEDAT-PVVTGFAVII 840
                 444455577888888887763..36677777777777777644443.4555555555 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 0.58
     MMS19_N 207 plalplllekLdstsvsakldaLqtlaacveaygaeavaehlralw 252
                 p++lplll+ L  +   +k  aL++++ ++++  ++ ++ ++++l+
  EPX73887.1 906 PTVLPLLLQCLVLEDIGVKYSALNVIMTAIKEM-PSLISDYMNSLI 950
                 7899**********************9999987.777777777766 PP

>> TraG_N  TraG-like protein, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.3   9.4e-08   0.00028     168     303 ..     212     373 ..     205     389 .. 0.64

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 9.4e-08
      TraG_N 168 Cvlp........dlalalgayslddl................lkspdlydslrsplrtv..................art........yptCkeawsgL 216
                 C++p        ++a    +++ ddl                l  p l++                           a           ++C++ w+++
  EPX73887.1 212 CYFPitfrappdAQA---LTITTDDLkeqlqntliatdafshLLLPELFK--------KlkasavrvkvdalkiftqA-CqhwhpnsyLWSCADYWESI 298
                 777777777664333...35666666655444432222222222222222........13322223335544544441.045566666*********** PP

      TraG_N 217 rarlanqvnpglkarlaaalkllgknanatafkdalsaasqyltgvsssasaediirqallinalkdgsqtlanlvdrsaaaaglaa 303
                 ++ +++ ++++l++ + +al++l kn            +  + ++++ + ++ di++ + + n  kd++ ++a++++  +aa ++++
  EPX73887.1 299 KQEILESTDTTLQNTALNALNILAKN-----------LYKENGLSSNFT-DFLDIVITQSFENFSKDFTVKIASAMGAVFAAVASVS 373
                 *************************6...........233444444444.8999999999999999998888888888877666554 PP

>> Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.1      0.29   8.6e+02      30      87 ..     447     503 ..     434     510 .. 0.76
   2 ?   -0.4   0.0      0.59   1.8e+03       5      40 ..     793     828 ..     790     832 .. 0.85
   3 ?    6.2   0.0    0.0052        16      24      81 ..     904     961 ..     885     969 .. 0.85
   4 ?    0.3   0.0      0.35   1.1e+03      21      45 ..     986    1010 ..     965    1015 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.29
  Vac14_Fab1_bd  30 kpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalvklvaDsdesvksg 87 
                    ++++ +   ++  +R  a++ ly ++ v     ++ l+ i + lv+++ + +  +++ 
     EPX73887.1 447 ASLMGV-AQDELDLRVSAVDVLYTLSTVKGYLDVNELTMIVQFLVEISFELNDPLRKN 503
                    444444.4446678999**********99999999*****999999998877766655 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.59
  Vac14_Fab1_bd   5 ggligLaavaialekkikeyleeivkpvlkcfsDkd 40 
                     g+  L  +a al ++ ++  +++v+ +l+c++ +d
     EPX73887.1 793 VGVQILSWIAKALVSRKHQSADNVVNYLLDCLHLED 828
                    57778889999999999**************97665 PP

  == domain 3  score: 6.2 bits;  conditional E-value: 0.0052
  Vac14_Fab1_bd  24 yleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalvklvaDsd 81 
                     + ++++ +l+c+  +d  v+y a   +   +k + + +  ++n++   l  +  D++
     EPX73887.1 904 DMPTVLPLLLQCLVLEDIGVKYSALNVIMTAIKEMPSLISDYMNSLIPSLLTIPKDTN 961
                    57789999*************************************9999999888875 PP

  == domain 4  score: 0.3 bits;  conditional E-value: 0.35
  Vac14_Fab1_bd   21 ikeyleeivkpvlkcfsDkdsrvRy 45  
                     i+++  ++++ ++ c++D  + vR 
     EPX73887.1  986 IQPFRAKVIREMIPCLDDIKRVVRT 1010
                     789999************9999985 PP

>> HEAT_UF  Repeat of uncharacterized protein PH0542
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       3.1   9.2e+03       4      21 ..      10      30 ..      10      32 .. 0.70
   2 ?    4.4   0.2     0.015        46      11      38 ..     549     575 ..     544     577 .. 0.80
   3 ?    6.5   0.0    0.0034        10       9      26 ..     925     942 ..     922     957 .. 0.79

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 3.1
                SHHHHHH...HHHHHHHHHCC CS
     HEAT_UF  4 LWtVqKN...alriivviake 21
                L tV KN   a  ii  i+k+
  EPX73887.1 10 LFTVDKNedeAKDIINHIIKD 30
                779999955566677777765 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.015
                 HHHHHHHHHCC-GGGHHHHHHHHHHHHH CS
     HEAT_UF  11 alriivviakekeeLyeplitKLfvmlk 38 
                 +l i++++  e ++L+++l+ +L+ +lk
  EPX73887.1 549 SLHILMTVS-EEKSLFKALVIRLIEVLK 575
                 678888765.5679*********99887 PP

  == domain 3  score: 6.5 bits;  conditional E-value: 0.0034
                 HHHHHHHHHHHCC-GGGH CS
     HEAT_UF   9 KNalriivviakekeeLy 26 
                   al +i++++ke+++L 
  EPX73887.1 925 YSALNVIMTAIKEMPSLI 942
                 569************995 PP

>> RTP1_C1  Required for nuclear transport of RNA pol II C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.0   0.00099         3       6      52 ..      47      95 ..      43      97 .. 0.86
   2 ?    2.0   0.1     0.079   2.3e+02       6      57 ..     236     289 ..     232     369 .. 0.80
   3 ?   -0.6   0.1       0.5   1.5e+03      19      51 ..     794     826 ..     742     829 .. 0.66
   4 ?   -2.1   0.0       1.5   4.4e+03      57      79 ..     931     953 ..     869     963 .. 0.59

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00099
     RTP1_C1  6 kdlqdpllpvrahglvlLrkliekkske..avldiekilkllleaLkde 52
                ++l+++ + +ra++l+lL++++e   k+  +v++++ +++  l+ L de
  EPX73887.1 47 DYLTNTNVSMRAKALLLLSQVLEGLPKDrlPVKHVSVLIQFYLNRLDDE 95
                6789999***************987655669999999999999999886 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.079
     RTP1_C1   6 kdlqdpllpvrahglvlLrkliekkskeavldiekilkllleaLk..dedsYvY 57 
                 ++lq++l+++ a   +lL +l++k +++av  +   lk++ +a +  +++sY++
  EPX73887.1 236 EQLQNTLIATDAFSHLLLPELFKKLKASAVRVKVDALKIFTQACQhwHPNSYLW 289
                 577888888888888888888888888888888888888888877555666654 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.5
     RTP1_C1  19 glvlLrkliekkskeavldiekilkllleaLkd 51 
                 g++ L+ ++++  + ++++++++++ ll++L+ 
  EPX73887.1 794 GVQILSWIAKALVSRKHQSADNVVNYLLDCLHL 826
                 566666666666666777777777777776665 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 1.5
     RTP1_C1  57 YLnaikgLvaLadvfpeevlklL 79 
                  + aik + +L++ + ++ ++ L
  EPX73887.1 931 IMTAIKEMPSLISDYMNSLIPSL 953
                 33455555555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1021 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       770  (0.0429472); expected 358.6 (0.02)
Passed bias filter:                      523  (0.0291706); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.85u 0.29s 00:00:01.13 Elapsed: 00:00:00.52
# Mc/sec: 5923.29
//
Query:       EPX73888.1  [L=732]
Description: mRNA cleavage and polyadenylation specificity factor complex subunit Pta1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-48  165.5   1.1    1.4e-48  165.5   1.1    2.0  2  DUF3453   Domain of unknown function (DUF3453)
  ------ inclusion threshold ------
       0.05   13.2   0.0      0.089   12.4   0.0    1.4  1  Gp_dh_C   Glyceraldehyde 3-phosphate dehydrogenase, C-termina


Domain annotation for each model (and alignments):
>> DUF3453  Domain of unknown function (DUF3453)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.5   1.1   1.5e-52   1.4e-48       2     210 ..      87     294 ..      86     310 .. 0.88
   2 ?   -1.2   0.1      0.14   1.3e+03      82     128 ..     316     374 ..     294     385 .. 0.68

  Alignments for each domain:
  == domain 1  score: 165.5 bits;  conditional E-value: 1.5e-52
     DUF3453   2 pavvkkvIqaaasiYplvlrliiknsedsetWekmtalKdeIlrlvdssdndgvrlaaiKFiervilvqtrgvadrneskeqseislsqvpdnhpilsp 100
                 ++v k +I++++++Yplv+ + ++  +d++ We+++++K++Il+l+dss     ++++iKFi+++il+q++g+ d++    +s++sls+vp+nhp+l+p
  EPX73888.1  87 EEVKKDIILCCCTLYPLVFFHCCTCADDTQSWETVSKIKQDILSLFDSST-NHLKISCIKFISTIILTQSSGIRDPRL-VTKSDVSLSKVPTNHPFLNP 183
                 5799*******************************************999.9********************998555.567***************** PP

     DUF3453 101 rkLeaEAkrlLdrlLkvlqeasiltsslviatlnslasiakqRpqfankilqallsfnplkk...pnlpptlsklqvksvektlkvlllnllknsse.h 195
                   L++EA +++ +l +v+ + + l++ +++++ln l +iak+R+++ ++i++ ll+f+  +    + ++  l kl+++++ek+lkv+ll+l kn    +
  EPX73888.1 184 TVLKQEAFDIFHKLFTVFSS-KVLSPLFITSVLNVLPIIAKRRKEHGPLIVENLLDFHLPNPketNGETAALDKLARRCIEKNLKVTLLHLTKNAGIsS 281
                 ******************55.588888999****************************6554689999999**********************633247 PP

     DUF3453 196 plqskiqqlleklga 210
                  l  ki+++l+  g+
  EPX73888.1 282 SLVEKIHAYLS--GQ 294
                 77777777777..33 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.14
     DUF3453  82 eqseislsqvpdnhpilsprkLeaEAkrlLdrlLkvlqeasiltss.............l 128
                 ++++ + s v++    ++pr+ e+++  l + l++++ ++  +t++             +
  EPX73888.1 316 SSKRAKSSAVQSLMDRIQPREVEEDSIALNNPLVNIFASQ-AATNPlasfdvtaipvevV 374
                 4456677788888888999999999999999999999665.6666646555555555543 PP

>> Gp_dh_C  Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0     1e-05     0.089       7      69 ..     272     333 ..     266     349 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1e-05
                 HHHHHHEEEEEEEEEEEECTTTSBSSSS--.SSTTTTSBTTCSSEEEE-THHHHHHHHSGGGT CS
     Gp_dh_C   7 vlndkfgikkglmttvhaytndQkllDgpskkdlrraraaaeniiptstgaakavglVlpelk 69 
                  l +++gi + l+  +hay   Q  + +    + ++  a ++n i ++   + av++ ++ ++
  EPX73888.1 272 HLTKNAGISSSLVEKIHAYLSGQIYQNKTD-DQAKKRHASTPNFISSKRAKSSAVQSLMDRIQ 333
                 5889******************88888554.7888888888***************9998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (732 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       710  (0.0396006); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.25s 00:00:00.91 Elapsed: 00:00:00.42
# Mc/sec: 5182.66
//
Query:       EPX73889.1  [L=328]
Description: hypothetical protein SOCG_03108 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.013   14.4  40.4       0.23   10.3  22.2    2.7  2  Spc7             Spc7 kinetochore protein
      0.057   12.5  39.2      0.091   11.9  38.7    1.6  1  CCDC144C         CCDC144C protein coiled-coil region
      0.072   12.5  41.6       0.64    9.4  13.5    2.2  2  Golgin_A5        Golgin subfamily A member 5
      0.099   12.3  41.7      0.097   12.4  38.7    2.2  2  SHE3             SWI5-dependent HO expression protein 3
       0.23    9.4  31.1       0.57    8.0  31.0    1.5  1  V_ATPase_I       V-type ATPase 116kDa subunit family
       0.31   11.1   3.7        3.1    7.9   0.0    3.0  2  DUF1192          Protein of unknown function (DUF1192)
       0.45   10.6   0.1       0.45   10.6   0.1    3.7  4  Prp19            Prp19/Pso4-like
        1.5    8.2  37.7        1.1    8.5  20.3    2.1  2  Rab5-bind        Rabaptin-like protein
        2.1    8.4  39.6       0.18   11.9   6.5    4.0  4  ADIP             Afadin- and alpha -actinin-Binding
        2.2    9.4  13.4        4.2    8.5   0.1    3.4  3  DUF5320          Family of unknown function (DUF5320)
        3.2    7.8  43.0          1    9.4  17.7    3.2  3  UPF0242          Uncharacterised protein family (UPF0242) N-t
        3.3    7.2  42.2       0.13   11.8  15.1    3.1  3  Leu_zip          Leucine zipper
          6    7.5  44.3        4.2    8.0  17.4    4.5  5  HIP1_clath_bdg   Clathrin-binding domain of Huntingtin-intera
        6.7    7.2  14.4       0.75   10.3   1.4    3.8  3  CRR7             Protein CHLORORESPIRATORY REDUCTION 7
        9.3    5.5  37.8        8.8    5.5   7.4    3.4  3  DUF3450          Protein of unknown function (DUF3450)


Domain annotation for each model (and alignments):
>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3  22.2   0.00019      0.23     164     269 ..      63     172 ..      45     180 .. 0.72
   2 ?   10.2   8.8    0.0002      0.24     158     244 ..     219     305 ..     196     327 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00019
        Spc7 164 eldellpeleeekaeleeeleklqeaaeeles..id.keeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeaerv.le 258
                  +++  + l+ e +e++++l+ ++++++eles  ++  + Le+l+ + +++ + +++k++ ++e q+  e  e +i++l+e+k+ l+eei   ++  + 
  EPX73889.1  63 AMQNEIDHLKVETEEVKSQLNVQKRRKKELESkkLNlLNLLESLKMQATSVANMVNRKQRTIKEDQKMHEGFERQISKLQEEKEALKEEIGIVQSQmKA 161
                 445555666677777777777777777777774444567788999999999999999999999999999999999999999999999999765544044 PP

        Spc7 259 eckgwsesevs 269
                 + ++ +++ev 
  EPX73889.1 162 ASEETEAYEVL 172
                 44555556665 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.0002
        Spc7 158 LekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqks 244
                  ++ e+ l + + + + ek+++ + lek ++ a+  +s  +++L +l ++l+ + ++ie+ +++l+e+q+ le  +e++++++++  
  EPX73889.1 219 TKQIEKPLRDSMANSSGEKEKIAHSLEKANNDAQMYSSFIENYLSQLTSSLDMQLNTIESTQNQLSEMQQILEMDDEEFANMNSSLL 305
                 4566677777888888999999999999999999999999***************************************99987653 PP

>> CCDC144C  CCDC144C protein coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9  38.7   7.7e-05     0.091       3     228 ..      63     288 ..      62     292 .. 0.96

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 7.7e-05
    CCDC144C   3 mLqeeiavlrleldtiknqsqekEkkyledieilkeknddlqkslKlneetltktvfqyngqLnvlkaentmlnskLekekqnkerleaevesyrsrLa 101
                  +q+ei  l++e +++k+q + + k+  ++ e+ k ++ +l +slK++  ++++ v + ++ +++ +   +  + ++ k +++ke l++e+  ++s+++
  EPX73889.1  63 AMQNEIDHLKVETEEVKSQLNVQ-KRRKKELESKKLNLLNLLESLKMQATSVANMVNRKQRTIKEDQKMHEGFERQISKLQEEKEALKEEIGIVQSQMK 160
                 58***************998877.7888*********************************************************************** PP

    CCDC144C 102 aAiqdheqsqtskrdlelalqrerdewlrlqdklnfdvsnlkdknevLsqqLskaeskansLenelhe.trdaLrektlllesvqrdlsqaqcqikele 199
                 aA +++e  +  +r+le+ + +   e l+   +++ +v +l+++   L   L +   +++++e+ l++ + ++  ek  +  s+++  + aq     +e
  EPX73889.1 161 AASEETEAYEVLQRNLEMDYDKVAAENLKKDPQIDKEVQELNETFLDLEGTLYRHLEETKQIEKPLRDsMANSSGEKEKIAHSLEKANNDAQMYSSFIE 259
                 *****************************************************************9862668999************************ PP

    CCDC144C 200 qmyqneeekvnkyiakqesleerlaqlqs 228
                 + + +  + ++  ++  es++++l+++q+
  EPX73889.1 260 NYLSQLTSSLDMQLNTIESTQNQLSEMQQ 288
                 *************************9995 PP

>> Golgin_A5  Golgin subfamily A member 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4  25.2    0.0089        11      30     156 ..      47     177 ..      44     207 .. 0.74
   2 ?    9.4  13.5   0.00054      0.64      11     148 ..     179     315 ..     170     325 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0089
   Golgin_A5  30 Lkegsgeeglessta..lsaeldelkqerdllreelq...klnqqieqlrtelqdleaqqqaeaeslreqlqeleeqleeerkakeeveaelerlkeel 123
                 +ke+ + ++++++ +  ++ e+d+lk e + ++++l+   + ++++e+ + +l +l ++ +++a s+ + +++ + +++e++k +e +e ++++l+ee 
  EPX73889.1  47 VKENTTRKASSGQMIaaMQNEIDHLKVETEEVKSQLNvqkRRKKELESKKLNLLNLLESLKMQATSVANMVNRKQRTIKEDQKMHEGFERQISKLQEEK 145
                 67777777666644323889*************99872223467899999************************************************* PP

   Golgin_A5 124 ryleeelvrskatlqsrikdrekeieklrnqlt 156
                 ++l+ee   +++++++  ++ e+  e l+++l 
  EPX73889.1 146 EALKEEIGIVQSQMKAASEETEA-YEVLQRNLE 177
                 ******99888777776665554.233444443 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00054
   Golgin_A5  11 dYKqkAarILQsKekliasLkegsgeeglesstalsaeldelkqerdllreelqklnqqieqlrtelqdleaqqqaeaeslreqlqeleeqleeerkak 109
                 dY + Aa  L +  ++ ++++e   e+ l+++ +l  +l+e+kq ++ lr+++++++++ e++   l++ ++ +q+ ++ +++ l++l + l+++ ++ 
  EPX73889.1 179 DYDKVAAENLKKDPQIDKEVQEL-NETFLDLEGTLYRHLEETKQIEKPLRDSMANSSGEKEKIAHSLEKANNDAQMYSSFIENYLSQLTSSLDMQLNTI 276
                 55555555555444443444443.3566778889999************************************************************** PP

   Golgin_A5 110 eeveaelerlkeelryleeelvrskatlqsrikdrekei 148
                 e+++++l+++++ l++  ee  +  ++l ++ ++ +++i
  EPX73889.1 277 ESTQNQLSEMQQILEMDDEEFANMNSSLLTETTETDSNI 315
                 ***************************999999999887 PP

>> SHE3  SWI5-dependent HO expression protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       7.4   8.8e+03     163     174 ..      19      30 ..       6      40 .. 0.47
   2 ?   12.4  38.7   8.1e-05     0.097       1     215 [.      57     286 ..      57     318 .. 0.67

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 7.4
                 XX.XXXXXXXXX CS
        SHE3 163 ndkdidtkldsy 174
                 +  d+ + ld++
  EPX73889.1  19 ELYDMANTLDNL 30 
                 222222233333 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 8.1e-05
                 XXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH... CS
        SHE3   1 StkVIesLHeqiDaLtktnlqLtqqsqeLleklelaqkkeskflenlaslkhENdnLsslLkRKerrlkdlekelselkesveelklekkqlkkrl... 96 
                 S++ I ++ ++iD+L  +  + + q +   ++ +  ++k+ ++l+ l slk        +++RK+r +k+ +k  + +++++ +l++ek++lk+++   
  EPX73889.1  57 SGQMIAAMQNEIDHLKVETEEVKSQLNVQKRRKKELESKKLNLLNLLESLKMQATSVANMVNRKQRTIKEDQKMHEGFERQISKLQEEKEALKEEIgiv 155
                 7899***********************99999999**********************************977777777777777777777777665111 PP

                 ....HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH......HHHHSSSXXXXX....XXXXXX.XXXXXXXXXXXXXXXX CS
        SHE3  97 ....enssaseteleeelerlkvqYdalvdsqkeYkehYqqeieeLkesleklk......lenekqleelqe....rissndkdidtkldsynnkkknl 181
                     +  s++ ++ e    +l+++Yd + + + +   + ++e++eL+e + +l+      le++kq+e+  +    + s ++++i ++l++ nn  +  
  EPX73889.1 156 qsqmKAASEETEAYEVLQRNLEMDYDKVAAENLKKDPQIDKEVQELNETFLDLEgtlyrhLEETKQIEKPLRdsmaNSSGEKEKIAHSLEKANNDAQMY 254
                 1100333333333333345799****9766666666689*********998876222223466666555433000033334445555555555554444 PP

                 XXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXX CS
        SHE3 182 esieeeknkkllkkleslaseld.leswlelykel 215
                  s  e+  ++l++ l+    +l+ +es  ++  e+
  EPX73889.1 255 SSFIENYLSQLTSSLD---MQLNtIESTQNQLSEM 286
                 4444444444444333...3333334444443333 PP

>> V_ATPase_I  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0  31.0   0.00048      0.57      27     295 ..      15     291 ..       6     311 .. 0.72

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.00048
  V_ATPase_I  27 kevrrcdemerklrfleeeieklekavikeeea..eesleapeekeldeleeelekleeelkelnenleklkkelnelvelkavlekakefleeeeeee 123
                 ++v+ + +m ++l+ l++ i k +  ++ +++   +++++a++ + +  +++e+++l+ e +e++++l+  k++++el+ +k  l +  e l+ ++++ 
  EPX73889.1  15 DNVKELYDMANTLDNLSNSIGKRQIPKTGSTDVkeNTTRKASSGQMIAAMQNEIDHLKVETEEVKSQLNVQKRRKKELESKKLNLLNLLESLKMQATSV 113
                 5799999***************66666655555555566677777888888888888888888888888888888888888888877777777664444 PP

  V_ATPase_I 124 eeeeseeeeeekeeeeeeeseeeeeeelleeeeelsfvaGvikrekveaf.erilwralrgnlflrqaeieep..ledpetgekve..ksvfiiffqg. 216
                 ++  ++++++ ke+++ +e  e++ ++l+ee+e+l+  +G+++++  +a  e   + +l++nl +++ ++  +   +dp+ +++v+   ++f+  ++g 
  EPX73889.1 114 ANMVNRKQRTIKEDQKMHEGFERQISKLQEEKEALKEEIGIVQSQMKAASeETEAYEVLQRNLEMDYDKVAAEnlKKDPQIDKEVQelNETFL-DLEGt 211
                 444444444444444444444455566677777899999*999876655515679**********9998876411456776666664434444.34443 PP

  V_ATPase_I 217 .eqlkekikkicesfgaklyelpeseeereeklkeveeriedlekvleqteealkevleeiakeleewklkvkkekaiyh 295
                   +  e  k+i + ++ ++ + + ++e+ +++l++ +++ +  ++ +e++ ++l++ l+   +++e+ + +++ +++i +
  EPX73889.1 212 lYRHLEETKQIEKPLRDSMANSSGEKEKIAHSLEKANNDAQMYSSFIENYLSQLTSSLDMQLNTIESTQNQLSEMQQILE 291
                 56667788999999999999999999999999999999999999999999999999999887777777777777777654 PP

>> DUF1192  Protein of unknown function (DUF1192)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.0    0.0026       3.1      27      49 ..      59      81 ..      58      84 .. 0.86
   2 ?    1.7   1.7      0.23   2.8e+02      28      53 ..     137     162 ..     132     170 .. 0.66

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0026
     DUF1192 27 erIalLeaEIaRleaaiakkkas 49
                ++Ia+++ EI++l+ ++++ k++
  EPX73889.1 59 QMIAAMQNEIDHLKVETEEVKSQ 81
                68************999887766 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.23
     DUF1192  28 rIalLeaEIaRleaaiakkkasraAA 53 
                  I++L++E + l+++i   +++ +AA
  EPX73889.1 137 QISKLQEEKEALKEEIGIVQSQMKAA 162
                 56667777666666666666666666 PP

>> Prp19  Prp19/Pso4-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.1   0.00037      0.45       3      34 ..      55      86 ..      53      94 .. 0.87
   2 ?   -0.5   0.1         1   1.2e+03      49      64 ..     136     151 ..     110     165 .. 0.78
   3 ?    1.3   0.1      0.28   3.3e+02      12      39 ..     176     203 ..     170     215 .. 0.82
   4 ?   -2.8   0.2       5.7   6.8e+03      30      38 ..     276     284 ..     258     290 .. 0.53

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00037
                SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       Prp19  3 tSiPslLstlqnEWDalmletfelrkqleqtr 34
                +S +++++++qnE D l  et e++ ql+  +
  EPX73889.1 55 ASSGQMIAAMQNEIDHLKVETEEVKSQLNVQK 86
                677899**********************9654 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 1
                 HHHHHHHHHHHHHHHH CS
       Prp19  49 rViArllkerdearea 64 
                 r i++l +e+++++e+
  EPX73889.1 136 RQISKLQEEKEALKEE 151
                 4566666666666665 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.28
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       Prp19  12 lqnEWDalmletfelrkqleqtrqeLsq 39 
                 l  ++D+++ e+ +   q+++  qeL +
  EPX73889.1 176 LEMDYDKVAAENLKKDPQIDKEVQELNE 203
                 6678999999999999999998888876 PP

  == domain 4  score: -2.8 bits;  conditional E-value: 5.7
                 HHHHHHHHH CS
       Prp19  30 leqtrqeLs 38 
                 +e+t+++Ls
  EPX73889.1 276 IESTQNQLS 284
                 233444444 PP

>> Rab5-bind  Rabaptin-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5  20.3   0.00094       1.1     124     288 ..       9     175 ..       6     183 .. 0.85
   2 ?    5.4   9.8    0.0087        10      21     120 ..     194     297 ..     175     314 .. 0.72

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00094
   Rab5-bind 124 hrkhvslleeEkidlPddveeLqelvlklrEeliesRtakdHlEekLkaE..illLkeqiqaEkalkEnlEetlqleierlkeelasis.slkveleei 219
                 ++ h +   +E +d+ +++++L + ++k +     s  +k+ +  k  +   i  ++++i   k + E++ + l+++  r k+el+s +  l   le +
  EPX73889.1   9 TKEHGKDNVKELYDMANTLDNLSNSIGKRQIPKTGSTDVKENTTRKASSGqmIAAMQNEIDHLKVETEEVKSQLNVQKRR-KKELESKKlNLLNLLESL 106
                 567788888999****************9999999999999999998864338889999999999999999999988655.56666644155567899* PP

   Rab5-bind 220 kvekeslekslaektrqldklqtikselEeqlkelekekaaveqlvleeknkaqrLqtELDvseqvqrD 288
                 k++  s+ ++ + k+r +++ q++ +  E q+ +l++ek a+++ +   +++ +   +E +  e+ qr+
  EPX73889.1 107 KMQATSVANMVNRKQRTIKEDQKMHEGFERQISKLQEEKEALKEEIGIVQSQMKAASEETEAYEVLQRN 175
                 ********************************************9887777777777888888888885 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.0087
   Rab5-bind  21 lrdqvkklqellrraneqLekerkdkkeLedslkelseets...kqvs.elakrvkksEllleeLqqafskakrniqeqlavlvksreqvedelvrLqk 115
                 + ++v++l e     +  L +++++ k++e+ l++++ ++s   ++++  l k+++++ +  + ++++ s+ + ++  ql+ + + ++q+++  + L+ 
  EPX73889.1 194 IDKEVQELNETFLDLEGTLYRHLEETKQIEKPLRDSMANSSgekEKIAhSLEKANNDAQMYSSFIENYLSQLTSSLDMQLNTIESTQNQLSEMQQILEM 292
                 444455555444455667777777888888877777777763323454156666667777777789999***********************9999999 PP

   Rab5-bind 116 dyesL 120
                 d e+ 
  EPX73889.1 293 DDEEF 297
                 88875 PP

>> ADIP  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5  11.0    0.0067         8      50     126 ..      49     125 ..      46     126 .. 0.92
   2 ?   11.9   6.5   0.00015      0.18      48     111 ..     124     187 ..     122     202 .. 0.88
   3 ?    1.0   1.1      0.35   4.2e+02      74     119 ..     196     241 ..     181     262 .. 0.59
   4 ?    3.0   3.9     0.082        98      61     108 ..     261     308 ..     244     314 .. 0.76

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0067
        ADIP  50 rdleqreslnetirkleaeierlqskierlktqleqlerelalvqakerqlekklktleqklknekeelqrlknalq 126
                 ++   + s+ + i  +++ei++l+ ++e +k ql  ++r+ + +++k+ +l   l++l+ ++ + +  ++r +++++
  EPX73889.1  49 ENTTRKASSGQMIAAMQNEIDHLKVETEEVKSQLNVQKRRKKELESKKLNLLNLLESLKMQATSVANMVNRKQRTIK 125
                 6677778888999**********************************************************999987 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 0.00015
        ADIP  48 rdrdleqreslnetirkleaeierlqskierlktqleqlerelalvqakerqlekklktleqkl 111
                  ++d+++ e ++++i+kl+ e+e l+ +i  ++ q ++   e+++++  +r+le ++ +  + +
  EPX73889.1 124 IKEDQKMHEGFERQISKLQEEKEALKEEIGIVQSQMKAASEETEAYEVLQRNLEMDYDKVAAEN 187
                 579**************************************************99987765554 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.35
        ADIP  74 skierlktqleqlerelalvqakerqlekklktleqklknekeelq 119
                 ++++ l +   +le  l  + ++++q+ek l++  +   +eke+++
  EPX73889.1 196 KEVQELNETFLDLEGTLYRHLEETKQIEKPLRDSMANSSGEKEKIA 241
                 4455555555555555555555555555555555555555555544 PP

  == domain 4  score: 3.0 bits;  conditional E-value: 0.082
        ADIP  61 tirkleaeierlqskierlktqleqlerelalvqakerqlekklktle 108
                  +++l+++++ + ++ie+ ++ql++ ++ l+   ++ ++++ +l t++
  EPX73889.1 261 YLSQLTSSLDMQLNTIESTQNQLSEMQQILEMDDEEFANMNSSLLTET 308
                 567888888888888888888888888888888888888887776665 PP

>> DUF5320  Family of unknown function (DUF5320)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.1    0.0035       4.2      62      97 ..      46      83 ..      28      85 .. 0.82
   2 ?    7.4   2.1    0.0079       9.5      65      94 ..     135     164 ..     107     169 .. 0.61
   3 ?   -0.3   0.4       1.9   2.3e+03      75      96 ..     259     280 ..     231     302 .. 0.67

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0035
     DUF5320 62 a..aaetaeaskeeekelLeeqaeaLeeeleaikkrlk 97
                   +++t++as+ + +++++++++ L+ e e++k++l+
  EPX73889.1 46 DvkENTTRKASSGQMIAAMQNEIDHLKVETEEVKSQLN 83
                1447889999*************************996 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0079
     DUF5320  65 etaeaskeeekelLeeqaeaLeeeleaikk 94 
                 e + ++ +eeke+L+e++ + +++++a ++
  EPX73889.1 135 ERQISKLQEEKEALKEEIGIVQSQMKAASE 164
                 344455566666666666666666666655 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 1.9
     DUF5320  75 kelLeeqaeaLeeeleaikkrl 96 
                 +++L +  ++L  +l++i++  
  EPX73889.1 259 ENYLSQLTSSLDMQLNTIESTQ 280
                 4555555556666666655443 PP

>> UPF0242  Uncharacterised protein family (UPF0242) N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   5.4     0.034        41     119     178 ..      36      95 ..       2     100 .. 0.64
   2 ?    9.4  17.7   0.00085         1      56     183 ..     105     230 ..      96     233 .. 0.73
   3 ?    6.6   4.6    0.0065       7.8     115     170 ..     233     288 ..     226     301 .. 0.89

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.034
     UPF0242 119 nqqLqekleaiaedfeelkleleeqLaekqellqeyqetieeqrsvlekrqdqieqLesk 178
                 + q+ +  +  ++++   k  + + +a  q+ +++++ ++ee +s l+ ++ + ++Lesk
  EPX73889.1  36 KRQIPKTGSTDVKENTTRKASSGQMIAAMQNEIDHLKVETEEVKSQLNVQKRRKKELESK 95 
                 445555555556677777777777777777777777777777777777777777777776 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00085
     UPF0242  56 kwekalkeklekskleekeaklteldeglktkeealeelqeeeeeLkeeldakeeelerlkeenq...qLqekleaiaedfeelkleleeqLaekqell 151
                  ++ +++    +++++ k++ ++e ++ ++  e ++ +lqee+e Lkee+   +++++   ee +    Lq  le+    +++  l+ + q+    + +
  EPX73889.1 105 SLKMQATS--VANMVNRKQRTIKEDQKMHEGFERQISKLQEEKEALKEEIGIVQSQMKAASEETEayeVLQRNLEMDYDKVAAENLKKDPQI---DKEV 198
                 44333333..688999**********99999999***************5555555554444444222788888885555555555555555...5568 PP

     UPF0242 152 qeyqetieeqrsvlekrqdqieqLeskVrDln 183
                 qe++et+ ++  +l +  ++ +q+e   rD +
  EPX73889.1 199 QELNETFLDLEGTLYRHLEETKQIEKPLRDSM 230
                 99999*******************99999965 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.0065
     UPF0242 115 lkeenqqLqekleaiaedfeelkleleeqLaekqellqeyqetieeqrsvlekrqd 170
                    e++++   le++ +d ++++ ++e+ L + +  l+   +tie+ ++ l + q+
  EPX73889.1 233 SSGEKEKIAHSLEKANNDAQMYSSFIENYLSQLTSSLDMQLNTIESTQNQLSEMQQ 288
                 567999***************************************99999988775 PP

>> Leu_zip  Leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7  13.1     0.061        73     176     242 ..      47     112 ..       1     130 [. 0.65
   2 ?   11.8  15.1   0.00011      0.13     131     242 ..     134     250 ..     112     254 .. 0.82
   3 ?    7.8  10.8    0.0018       2.1     138     243 ..     194     297 ..     185     308 .. 0.75

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.061
     Leu_zip 176 elgekkdekenskeiskleeklaelkldlektleektasaksleedlastkhelLkvqeqLelaeke 242
                   ++++ ++++ + i+ +++++ +lk++ e+ +++  + +k+ +++l s k +lL++ e L++    
  EPX73889.1  47 VKENTTRKASSGQMIAAMQNEIDHLKVETEEVKSQL-NVQKRRKKELESKKLNLLNLLESLKMQATS 112
                 222333344477899999999999999998766655.567778999***************998665 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 0.00011
     Leu_zip 131 LkkeierLkeenekLkerlkelEkqatsaleeksk...lekalkelqkelgekkdeke..nskeiskleeklaelkldlektleektasaksleedlas 224
                  + +i++L+ee e Lke +  + +q++ a ee ++   l+++l+   +++ +++ +k+   +ke+++l+e++ +l+  l ++lee+++ +k l++ +a+
  EPX73889.1 134 FERQISKLQEEKEALKEEIGIVQSQMKAASEETEAyevLQRNLEMDYDKVAAENLKKDpqIDKEVQELNETFLDLEGTLYRHLEETKQIEKPLRDSMAN 232
                 6789***********************9999987622255666655555555544444448999*********************************** PP

     Leu_zip 225 tkhelLkvqeqLelaeke 242
                 +  e  k+ + Le a+++
  EPX73889.1 233 SSGEKEKIAHSLEKANND 250
                 ************999876 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.0018
     Leu_zip 138 LkeenekLkerlkelEkqatsaleeksklekalkelqkelgekkdekenskeiskleeklaelkldlektleektasaksleedlastkhelLkvqeqL 236
                 +++e + L+e + +lE  + + lee +++ek l++  ++ + +k++ +  ++++k ++  +   + +e+ l++ t+s +   + + st+++l ++q+ L
  EPX73889.1 194 IDKEVQELNETFLDLEGTLYRHLEETKQIEKPLRDSMANSSGEKEKIA--HSLEKANNDAQMYSSFIENYLSQLTSSLDMQLNTIESTQNQLSEMQQIL 290
                 6788999****************************9877777776666..4444444443333344445555555544444456788999999****** PP

     Leu_zip 237 elaekeL 243
                 e+ ++e 
  EPX73889.1 291 EMDDEEF 297
                 **99986 PP

>> HIP1_clath_bdg  Clathrin-binding domain of Huntingtin-interacting protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   5.1     0.092   1.1e+02      39      88 ..      47      95 ..      34     102 .. 0.75
   2 ?    8.0  17.4    0.0035       4.2      13      99 .]      59     148 ..      48     148 .. 0.69
   3 ?    0.8   1.5      0.64   7.6e+02      42      69 ..     156     184 ..     150     201 .. 0.68
   4 ?    6.1   3.4     0.014        17      21      87 ..     190     256 ..     170     262 .. 0.80
   5 ?    5.9   4.6     0.017        20      32      81 ..     258     310 ..     248     321 .. 0.79

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.092
  HIP1_clath_bdg 39 lkeeaerkleeqkeelekLkreleakraelarlkssLesseqsgeqlssq 88
                    +ke+++rk +  ++ + ++++e+ + + e +++ks L+ +++ +++l+s+
      EPX73889.1 47 VKENTTRKASSGQM-IAAMQNEIDHLKVETEEVKSQLNVQKRRKKELESK 95
                    66666666665544.56699999999999999999999999888888765 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0035
  HIP1_clath_bdg  13 kqlsvarqaqeeverekkeleeelerlkeeaerkle....eqkeelekLkreleakraelarlkssLesseqsgeqlssqlaaLqaEkesL 99 
                     +++ +++++ + ++ e +e++ +l+  k+  +++le    +    le+Lk + ++  + ++r + ++++ ++  e  + q+++Lq+Eke+L
      EPX73889.1  59 QMIAAMQNEIDHLKVETEEVKSQLNVQKRR-KKELEskklNLLNLLESLKMQATSVANMVNRKQRTIKEDQKMHEGFERQISKLQEEKEAL 148
                     555666666666666666666666543333.33333111133455788888888888889999**************************97 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.64
  HIP1_clath_bdg  42 eaerkle.eqkeelekLkreleakraela 69 
                     ++++k + e +e  e L+r+le+  +++a
      EPX73889.1 156 QSQMKAAsEETEAYEVLQRNLEMDYDKVA 184
                     45555544788888889998888766654 PP

  == domain 4  score: 6.1 bits;  conditional E-value: 0.014
  HIP1_clath_bdg  21 aqeeverekkeleeelerlkeeaerkleeqkeelekLkreleakraelarlkssLesseqsgeqlss 87 
                     +  ++++e +el+e++ +l+    r+lee k+  + L+  +++++ e +++ +sLe+ ++  +  ss
      EPX73889.1 190 KDPQIDKEVQELNETFLDLEGTLYRHLEETKQIEKPLRDSMANSSGEKEKIAHSLEKANNDAQMYSS 256
                     445688889999999999999999***999999999*******************988776665555 PP

  == domain 5  score: 5.9 bits;  conditional E-value: 0.017
  HIP1_clath_bdg  32 leeelerlkeeaerkle...eqkeelekLkreleakraelarlkssLesseqs 81 
                     +e+ l +l+++ +++l+     + +l ++++ le+  +e+a+++ssL +++++
      EPX73889.1 258 IENYLSQLTSSLDMQLNtieSTQNQLSEMQQILEMDDEEFANMNSSLLTETTE 310
                     6777888888888888766578899999******************9776543 PP

>> CRR7  Protein CHLORORESPIRATORY REDUCTION 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.2      0.42     5e+02      33      65 ..     113     145 ..     101     156 .. 0.81
   2 ?   10.3   1.4   0.00063      0.75      25      69 ..     164     209 ..     154     217 .. 0.87
   3 ?    3.3   0.3     0.096   1.1e+02      31      63 ..     256     287 ..     234     301 .. 0.80

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.42
                 HHHHHHH-TTTS-HHHHH---HHHHHHHHHHH- CS
        CRR7  33 LkelLekeqdelprdlaklesleeqaqyLldta 65 
                   ++++++q+++ +d + +e +e q+++L ++ 
  EPX73889.1 113 VANMVNRKQRTIKEDQKMHEGFERQISKLQEEK 145
                 567888899999999999999**9999998765 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00063
                 -HHHHHHHHHHHHHH.-TTTS-HHHHH---HHHHHHHHHHH---EE CS
        CRR7  25 taeellekLkelLek.eqdelprdlaklesleeqaqyLldtaceLe 69 
                 +++e  e L++ Le    +   ++l+k +++++++q+L +t+ +Le
  EPX73889.1 164 EETEAYEVLQRNLEMdYDKVAAENLKKDPQIDKEVQELNETFLDLE 209
                 5789999*******9666677889********************98 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.096
                 HHHHHHHHH-TTTS-HHHHH---HHHHHHHHHH CS
        CRR7  31 ekLkelLekeqdelprdlaklesleeqaqyLld 63 
                 ++++++L++  ++l+ +l+ +es+++q++++ +
  EPX73889.1 256 SFIENYLSQLTSSLDMQLNTIESTQNQLSEM-Q 287
                 5688999999999999999999999998874.3 PP

>> DUF3450  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   7.4    0.0074       8.8      25      86 ..      54     115 ..      22     124 .. 0.62
   2 ?    5.5  12.3    0.0078       9.3      11      85 ..     110     184 ..     100     222 .. 0.73
   3 ?    4.2   7.4     0.019        23      27      96 ..     218     291 ..     211     318 .. 0.72

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0074
     DUF3450  25 aekavaaaaqsqkkidklddekqellaeyralkeeleslevyneqlerlvasqeqeiaslee 86 
                 ++++ +  a++q++id+l+ e++e++++++  k+++++le ++ +l +l++s++ + +s+ +
  EPX73889.1  54 KASSGQMIAAMQNEIDHLKVETEEVKSQLNVQKRRKKELESKKLNLLNLLESLKMQATSVAN 115
                 33333444556666666666666666666666666666666666666666666555555544 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.0078
     DUF3450  11 sgalaatldqalkeaekavaaaaqsqkkidklddekqellaeyralkeeleslevyneqlerlvasqeqeiasle 85 
                 ++++a+ ++  + + ++ ++  +  +++i+kl++ek+ l++e+  ++++ ++++ + e +e l++++e + +++ 
  EPX73889.1 110 ATSVANMVNRKQRTIKEDQKMHEGFERQISKLQEEKEALKEEIGIVQSQMKAASEETEAYEVLQRNLEMDYDKVA 184
                 344467777777777788888888888999999999999999999999998888888888888888876666554 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.019
     DUF3450  27 kavaaaaqsqkkidklddekqellaeyralkeele....slevyneqlerlvasqeqeiasleeqieeieeier 96 
                 ++ ++++     + +++ ek++++  ++++++ ++     +e y +ql+++++ q ++i+s ++q++e+++i +
  EPX73889.1 218 ETKQIEKPLRDSMANSSGEKEKIAHSLEKANNDAQmyssFIENYLSQLTSSLDMQLNTIESTQNQLSEMQQILE 291
                 55556666666666667777777777766666655111156889999*********************999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3356  (0.187183); expected 358.6 (0.02)
Passed bias filter:                      571  (0.0318478); expected 358.6 (0.02)
Passed Vit filter:                       111  (0.00619109); expected 17.9 (0.001)
Passed Fwd filter:                        62  (0.00345808); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 1.23u 0.30s 00:00:01.53 Elapsed: 00:00:00.53
# Mc/sec: 1878.73
//
Query:       EPX73890.1  [L=85]
Description: transcriptional regulator Pcc1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-21   76.6   0.0    1.3e-21   76.5   0.0    1.0  1  Pcc1      Transcription factor Pcc1


Domain annotation for each model (and alignments):
>> Pcc1  Transcription factor Pcc1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.5   0.0   7.3e-26   1.3e-21       2      73 ..       8      79 ..       7      80 .. 0.97

  Alignments for each domain:
  == domain 1  score: 76.5 bits;  conditional E-value: 7.3e-26
                EEEEEE-SSHHHHHHHHHHHHHHCHC-TTECEEEEEEETTEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHH CS
        Pcc1  2 ltisvpfpterlAsialrtLqvDkelsplavkrslslegnvLqveykAttnrmLRvavngfleslglvletm 73
                ++++vpfp+e++A+  +++L++D el++++v r lslegn L+++y  +++rm Rv++n+f+e+l lv++ m
  EPX73890.1  8 VEVRVPFPSEQDAKLCMQVLAPDRELKEDQVARILSLEGNYLVAKYFCSSARMTRVTLNSFFENLHLVVDSM 79
                689*************************99***************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       330  (0.0184059); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.24s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 635.30
//
Query:       EPX73891.1  [L=793]
Description: spindle pole body protein Ppc89 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-19   70.4   4.0    1.3e-19   70.4   4.0    5.0  6  Cep57_MT_bd    Centrosome microtubule-binding domain of Cep57
    3.8e-06   26.9   7.6    3.8e-06   26.9   7.6    4.8  5  Cep57_CLD_2    Centrosome localisation domain of PPC89
  ------ inclusion threshold ------
      0.042   11.6   0.3      0.073   10.8   0.3    1.3  1  Raffinose_syn  Raffinose synthase or seed imbibition protein 
        7.3    6.7  15.6        3.7    7.6   0.9    3.6  3  DUF1664        Protein of unknown function (DUF1664)


Domain annotation for each model (and alignments):
>> Cep57_MT_bd  Centrosome microtubule-binding domain of Cep57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   8.2      0.75   3.4e+03      11      68 ..     294     354 ..     291     359 .. 0.80
   2 ?    1.6   0.6     0.084   3.8e+02       2      43 ..     351     392 ..     350     414 .. 0.87
   3 ?   -2.6   0.1       1.8   7.9e+03      41      55 ..     460     474 ..     459     476 .. 0.84
   4 ?   -1.8   0.1      0.96   4.3e+03      16      30 ..     500     514 ..     498     537 .. 0.67
   5 ?   -2.3   1.3       1.4   6.2e+03      35      56 ..     593     612 ..     579     615 .. 0.69
   6 !   70.4   4.0   2.9e-23   1.3e-19       2      76 ..     709     783 ..     708     784 .. 0.99

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.75
  Cep57_MT_bd  11 eaLaevlkeLedEfehlklelqelaaqynaldpslgkrkRk..dLaeel.eelvkrlEaKa 68 
                  +aL++ l++++ E + +  e  +l++++  l+++++++k++  +L+ ++ +el+ ++ +K+
   EPX73891.1 294 KALERKLETMKREQSDYEEEILQLRERIDHLTDAYTREKKRarSLEDRMsKELMTKMSEKE 354
                  6888999999999999999999999999999999977766511577666478888888886 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.084
  Cep57_MT_bd   2 tlrpsqspkeaLaevlkeLedEfehlklelqelaaqynaldp 43 
                  ++++s +++ +La+ l +  +E e l  + + +++qy  +++
   EPX73891.1 351 SEKESETIDPSLASRLVATAKEKEALFEQVKSVQEQYDHTQQ 392
                  578899999999999999999999999999999999999884 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 1.8
  Cep57_MT_bd  41 ldpslgkrkRkdLae 55 
                  ld +++++kR +L+e
   EPX73891.1 460 LDEASQRKKRSELKE 474
                  688999999999986 PP

  == domain 4  score: -1.8 bits;  conditional E-value: 0.96
  Cep57_MT_bd  16 vlkeLedEfehlkle 30 
                  ++keL++E+e  k+ 
   EPX73891.1 500 LVKELKKEVERRKAL 514
                  788888888876654 PP

  == domain 5  score: -2.3 bits;  conditional E-value: 1.4
  Cep57_MT_bd  35 aaqynaldpslgkrkRkdLaee 56 
                  +++ ++    l++r+R+ L+++
   EPX73891.1 593 EKETEQAR--LNMRRRERLQQK 612
                  55555555..899999999986 PP

  == domain 6  score: 70.4 bits;  conditional E-value: 2.9e-23
  Cep57_MT_bd   2 tlrpsqspkeaLaevlkeLedEfehlklelqelaaqynaldpslgkrkRkdLaeeleelvkrlEaKadqIykLyd 76 
                  t+rp+q+p++aL++v ++L++E++ lk+++++++++y++l p ++kr+R++++ +l + ++ +E+K+dqIy+L+d
   EPX73891.1 709 TMRPTQPPEQALKSVTEQLTKELMRLKKQYDKFSKRYHSLVPEYHKRRRQSIKGKLMKTLELMERKSDQIYALHD 783
                  8*************************************************************************9 PP

>> Cep57_CLD_2  Centrosome localisation domain of PPC89
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.3         3   1.3e+04       5      13 ..     102     110 ..      99     111 .. 0.75
   2 ?    2.5   1.4     0.035   1.5e+02       2      15 ..     311     324 ..     289     354 .. 0.60
   3 !   26.9   7.6   8.6e-10   3.8e-06       3      59 ..     371     427 ..     369     448 .. 0.93
   4 ?   -1.1   0.9      0.48   2.1e+03      48      58 ..     502     512 ..     496     519 .. 0.81
   5 ?   -1.8   0.1      0.79   3.6e+03      48      60 ..     725     737 ..     718     751 .. 0.64

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 3
  Cep57_CLD_2   5 vktLqnrLd 13 
                   ++L+n+++
   EPX73891.1 102 FNRLRNHNN 110
                  578999986 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.035
  Cep57_CLD_2   2 eaevktLqnrLdsl 15 
                  e e+++L++r d+l
   EPX73891.1 311 EEEILQLRERIDHL 324
                  34444444444444 PP

  == domain 3  score: 26.9 bits;  conditional E-value: 8.6e-10
  Cep57_CLD_2   3 aevktLqnrLdsltrklqvheeelkrLnkERdsalrqLgvAyeelneLkaevealrk 59 
                   e+++L ++ +s+++++ + + ++k++  +R+s++++L+ +++e+ eL +e+  l++
   EPX73891.1 371 KEKEALFEQVKSVQEQYDHTQQLYKNVLLDRESYIMRLSTKISENHELNNENQKLKE 427
                  799***************************************************997 PP

  == domain 4  score: -1.1 bits;  conditional E-value: 0.48
  Cep57_CLD_2  48 neLkaevealr 58 
                   eLk eve+++
   EPX73891.1 502 KELKKEVERRK 512
                  69999999976 PP

  == domain 5  score: -1.8 bits;  conditional E-value: 0.79
  Cep57_CLD_2  48 neLkaevealrkE 60 
                  ++L+ e+ +l+k+
   EPX73891.1 725 EQLTKELMRLKKQ 737
                  4455555555554 PP

>> Raffinose_syn  Raffinose synthase or seed imbibition protein Sip1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.3   1.6e-05     0.073     220     314 ..     470     564 ..     461     581 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 1.6e-05
  Raffinose_syn 220 kGvksledGGvpPkfviiddGwqsiekdedldkdaenvvkegeqlaarlvsikenkkfkkkkskkfiddsgsG.lkavvkdlkerfkslddvyvwh 314
                    + +k++e+G +  + +  d   q++ ++++l+k+ +++v+  + l  +l+ +k+n+k k ++sk+   ++++   k   k+++ +f s++  y w 
     EPX73891.1 470 SELKEMENGSTNKENIAPDKQQQTVPENTNLVKELKKEVERRKALELKLLAFKDNEKPKSNRSKRIHVSPTVNkKKRWRKNARPEF-SMESEYEWS 564
                    5689**********9999******************************************99998766555541567889999999.999999995 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.9   0.00081       3.7      57     118 ..     282     343 ..     275     352 .. 0.86
   2 ?    1.6   3.4     0.061   2.8e+02      55     124 .]     367     436 ..     346     436 .. 0.80
   3 ?    4.0   0.2     0.011        49      40      78 ..     717     755 ..     703     785 .. 0.68

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.00081
     DUF1664  57 laatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeavegleskle 118
                 +a+t ++L    + +++kl+ +k+ +++ +ee+ ++re ++++ +  +  k+  ++le +++
  EPX73891.1 282 IAETDEKLFYAHKALERKLETMKREQSDYEEEILQLRERIDHLTDAYTREKKRARSLEDRMS 343
                 56777777777788999999999999999999999999999999999999999999998876 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.061
     DUF1664  55 eslaatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeaveglesklerieekQ 124
                  + a+ k+ L +++++v+++ d+++++ k++  + ++    ls+  ++ +++++  ++l++++  +e+kQ
  EPX73891.1 367 VATAKEKEALFEQVKSVQEQYDHTQQLYKNVLLDRESYIMRLSTKISENHELNNENQKLKERILILEGKQ 436
                 456788999*****************99999877777777777777777888888888888888888888 PP

  == domain 3  score: 4.0 bits;  conditional E-value: 0.011
     DUF1664  40 sdavesvskqleqvseslaatkrhLssridrvdkkldeq 78 
                 ++a++sv++ql++    l+++ +++s+r +++  +  + 
  EPX73891.1 717 EQALKSVTEQLTKELMRLKKQYDKFSKRYHSLVPEYHKR 755
                 789999******999999999999999999887665543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (793 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2459  (0.137152); expected 358.6 (0.02)
Passed bias filter:                      507  (0.0282782); expected 358.6 (0.02)
Passed Vit filter:                        69  (0.00384851); expected 17.9 (0.001)
Passed Fwd filter:                        20  (0.00111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.94u 0.29s 00:00:01.23 Elapsed: 00:00:00.49
# Mc/sec: 4851.93
//
Query:       EPX73892.1  [L=509]
Description: pyruvate kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   9.1e-167  554.3   3.2   1.2e-166  553.8   3.2    1.1  1  PK         Pyruvate kinase, barrel domain
    1.8e-30  105.5   0.2    5.2e-30  104.1   0.1    1.9  2  PK_C       Pyruvate kinase, alpha/beta domain
    4.1e-06   26.1   0.3      1e-05   24.8   0.3    1.6  1  HpcH_HpaI  HpcH/HpaI aldolase/citrate lyase family
  ------ inclusion threshold ------
       0.15   11.6   0.0       0.28   10.7   0.0    1.4  1  UPF0128    Uncharacterised protein family (UPF0128)


Domain annotation for each model (and alignments):
>> PK  Pyruvate kinase, barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  553.8   3.2  2.7e-170  1.2e-166       2     346 ..      26     370 ..      25     372 .. 0.99

  Alignments for each domain:
  == domain 1  score: 553.8 bits;  conditional E-value: 2.7e-170
                 --SEEEEEESCCCTSHHHHHHHHHHTEEEEEEETTSS-HHHHHHHHHHHHHHHHTTTTS.-EEEEE---S-EBB--BTTCSSSEEE-TTSEEEEE-SCT CS
          PK   2 rrtkivctlGPasesvekleklieaGlnvvrlnfshGsheehqerienvreaekklgkk.vaillDtkGpeirtgllkdgkkdielkegdklkvsldek 99 
                 rrt+i+ct+GP+s++ve++ kl++aG+n+vr+nfshGs+e+hq++i+n+r+a  + +   +ai+lDtkGpeirtg++ dg+ d+ +++g+++++++de+
  EPX73892.1  26 RRTSIICTIGPKSNNVETMCKLRDAGMNIVRMNFSHGSYEYHQSVIDNARKASATNPLFpLAIALDTKGPEIRTGFTIDGQ-DYPVSTGHEMIFTTDEA 123
                 89**************************************************99988878*******************98.***************** PP

                 CTTTBBTTEEEBS-TTHHHHS-TTEEEEETTTTEEEEEEEEETTEEEEEEESS-EEE-SS-BEE-TTS---S-SS-HHHHHHHHHHHHCT-SEEEETTE CS
          PK 100 lkeegdeelialdyknivkdvevGktilvdDGllslkvlevdeekeleveventgvlgskkgvnlpgtkvdlpalsekDkadlrfgvkqgvdliaasfv 198
                 ++e++d++++++dy+ni+k++evG++i+vdDG+ls++v e+ ++k+l+v+++n+g+++skkgvnlp t+vdlpalsekDk+dlrfgvk+gvd+i+asf+
  EPX73892.1 124 YAEKSDNKVMYIDYQNITKVIEVGRIIYVDDGILSFTVIEKIDDKNLKVRTNNNGKISSKKGVNLPKTDVDLPALSEKDKSDLRFGVKNGVDMIFASFI 222
                 *************************************************************************************************** PP

                 -SHHHHHHHHHHHTCCCTTSEEEEEE-SCHHHHTHHHHHHHSSEEEEEHHHHHHHSTCCCHHHHHHHHHHHHHHHT--EEEESSTTGGGGTSSS--HHH CS
          PK 199 rkasDvkevrevleeegkeikiiakienqegvenldeileasDgimvarGDlGieipaekvllvqkklikkcnlagkpvitatqmlesmiknPrptrae 297
                 r+a+Dv+++revl+eegk+iki+ kienq+gv+n deilea+DgimvarGDlGieipa++v+++qk++i+k+n+agkp+ +atqmlesm++nPrptrae
  EPX73892.1 223 RRAEDVHNIREVLGEEGKNIKILCKIENQQGVNNYDEILEATDGIMVARGDLGIEIPASQVFVAQKMMIAKANIAGKPIACATQMLESMTYNPRPTRAE 321
                 *************************************************************************************************** PP

                 HHHHHHHHHHT-SEEEESHHHHTSS-HHHHHHHHHHHHHHHHHTS-HHH CS
          PK 298 vsDvanavlDGtDavmLsgetakGkyPveavkamaevaleaekalkelk 346
                 vsDv+navlDG+D vmLsgetakG+yPveav+ mae+a+ +e+++++ +
  EPX73892.1 322 VSDVGNAVLDGADLVMLSGETAKGSYPVEAVTYMAETARASEASIPYGN 370
                 *******************************************998765 PP

>> PK_C  Pyruvate kinase, alpha/beta domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       2.2   9.9e+03      39      53 ..     347     361 ..     339     365 .. 0.74
   2 !  104.1   0.1   1.2e-33   5.2e-30       1     115 [.     388     504 ..     388     506 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 2.2
                 SEEEEEESHHHHHHH CS
        PK_C  39 vpiiavtpneltarq 53 
                  p+ avt+  +tar+
  EPX73892.1 347 YPVEAVTYMAETARA 361
                 577788888888886 PP

  == domain 2  score: 104.1 bits;  conditional E-value: 1.2e-33
                 HHHHHHHHHHHHHHT-SEEEEE-SSSHHHHHHHHT-TSSEEEEEESHHHHHHHHHHCTTEEHHH.HHHHH......TTSHHHHHHHHHHHTTSS-STSE CS
        PK_C   1 eaiakaaveaaeelgakaIvvltesGetArliskyrpkvpiiavtpneltarqlalyrGvypvlvekakt...aestdellreavkvakeaglvkkgde 96 
                 e++a aa+ a+ e +akaI+vl+ +G+tArl+skyrp++pii+vt++ ++arq +l rGvyp+ +eka     ++++d++++ ++++  + gl+kkgd+
  EPX73892.1 388 ETTAVAAIGASIESDAKAIIVLSVTGTTARLCSKYRPSIPIIMVTRDAQRARQAHLNRGVYPTIYEKAALsdwQQDVDARVAFGCEQGYKMGLLKKGDN 486
                 78999***********************************************************99765599999*******9**************** PP

                 EEEEE-SSSS..SS--EEE CS
        PK_C  97 vvvtaGtpkgesgttNtlr 115
                 v+v++G   g +g+t ++r
  EPX73892.1 487 VIVLQGAVGG-KGHTSIFR 504
                 ******9988.9**99887 PP

>> HpcH_HpaI  HpcH/HpaI aldolase/citrate lyase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.3   2.2e-09     1e-05      75     176 ..     203     296 ..     193     338 .. 0.80

  Alignments for each domain:
  == domain 1  score: 24.8 bits;  conditional E-value: 2.2e-09
                 HHHGG.HHHTTSSEEEESS--SHHHHHHHHHHTSHTTTS---HCCC-EEEEEE-SHHHHHTHHHHH.TSTTEEEEEE-HHHHHHHTT-TTSTTSHHHHH CS
   HpcH_HpaI  75 kqdle.vldlgaqvvlvPkvetaeealevvsalrepekgirganketrllaqiEsaegvknaeeIa.avegldgvflGaeDlsadlgtkrspegtevld 171
                 k dl+  ++ g++ +   ++  ae++ ++ ++l e         k++++l+ iE ++gv+n +eI+ a+   dg++++  Dl  ++ +++    ++++ 
  EPX73892.1 203 KSDLRfGVKNGVDMIFASFIRRAEDVHNIREVLGEEG-------KNIKILCKIENQQGVNNYDEILeAT---DGIMVARGDLGIEIPASQVFVAQKMMI 291
                 5677788999999999999999999999999998887.......9********************9554...666677778877777777666666666 PP

                 HHHHH CS
   HpcH_HpaI 172 areri 176
                 a+ +i
  EPX73892.1 292 AKANI 296
                 65555 PP

>> UPF0128  Uncharacterised protein family (UPF0128)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   6.2e-05      0.28      31     100 ..     205     265 ..     199     298 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 6.2e-05
     UPF0128  31 dlvlGkkdGketyfaskaeereeGekyeeegkeyeieevlkelPknakllarieieeGkaylvleleeed 100
                 dl +G k+G+  +fas            + +  ++i evl e  kn k+l +ie ++G       le+ d
  EPX73892.1 205 DLRFGVKNGVDMIFASFIR---------RAEDVHNIREVLGEEGKNIKILCKIENQQGVNNYDEILEATD 265
                 8999999999999999544.........3344689***********************988877787776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (509 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       546  (0.0304535); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 3516.80
//
Query:       EPX73893.1  [L=112]
Description: type II fatty acid synthase component [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.7e-13   50.7   0.1    2.1e-13   50.4   0.1    1.1  1  PP-binding    Phosphopantetheine attachment site
    0.00082   19.6   0.2     0.0012   19.0   0.2    1.3  1  PP-binding_2  Acyl-carrier
  ------ inclusion threshold ------
       0.07   12.4   0.0      0.077   12.2   0.0    1.1  1  Kdo_hydroxy   3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydro


Domain annotation for each model (and alignments):
>> PP-binding  Phosphopantetheine attachment site
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.4   0.1   3.6e-17   2.1e-13       2      67 .]      38     105 ..      37     105 .. 0.92

  Alignments for each domain:
  == domain 1  score: 50.4 bits;  conditional E-value: 3.6e-17
  PP-binding   2 klrelvaevlgv.pleeidpdtdlf.dlGlDSllavellaaleeefgveiplsdlfehptlaelaayl 67 
                 ++  +v++  ++ +++ ++p+++++ dlGlDSl+ave+++a+eeef ++ip+ d  e  ++++ ++y+
  EPX73893.1  38 RIMKVVSSFDKIqDPKKVTPTASFSnDLGLDSLDAVEVVMAIEEEFSIQIPDKDADEIISVSDAVNYI 105
                 677888888888788889*******99************************************99997 PP

>> PP-binding_2  Acyl-carrier
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.2     2e-07    0.0012      24      82 ..      50     103 ..      34     111 .. 0.74

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 2e-07
  PP-binding_2  24 rkgekvtpsskleelrtredrlwdgldtvefvedveelfdvivsdevadnfetlqeiad 82 
                   ++ +kvtp++ +      +d   d+ld+ve v+ +ee f + ++d+ ad++ ++ +  +
    EPX73893.1  50 QDPKKVTPTASF-----SNDLGLDSLDAVEVVMAIEEEFSIQIPDKDADEIISVSDAVN 103
                   444555555544.....356668**************************9877766555 PP

>> Kdo_hydroxy  3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   1.3e-05     0.077     125     162 ..      13      50 ..       7      82 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.3e-05
  Kdo_hydroxy 125 afpsrptqGeriLRvFtNinPdgepRvWrvgepFeela 162
                  a  srp+   r LR+++   Pd e+R+ +v  +F+++ 
   EPX73893.1  13 AVASRPMTNLRPLRFYSVARPDAEQRIMKVVSSFDKIQ 50 
                  6789******************************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       361  (0.020135); expected 358.6 (0.02)
Passed bias filter:                      272  (0.015171); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 774.55
//
Query:       EPX73894.1  [L=143]
Description: protein phosphatase Fmp31 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-14   54.4   0.0    1.9e-14   54.0   0.0    1.3  1  Rhodanese     Rhodanese-like domain
     0.0074   16.9   0.0      0.089   13.4   0.0    2.0  2  HSF_DNA-bind  HSF-type DNA-binding


Domain annotation for each model (and alignments):
>> Rhodanese  Rhodanese-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.0   0.0   2.2e-18   1.9e-14       9     106 ..      44     139 ..      24     140 .. 0.77

  Alignments for each domain:
  == domain 1  score: 54.0 bits;  conditional E-value: 2.2e-18
   Rhodanese   9 lekgkvallDvRppeeYekghIpgAvnv.skdtlsrakkseapllelpeellelgidnkktvvvycdgggraaaaaallkklGyknvsvldGGfkawke 106
                  e+++++l+DvR+p e+e+g+I+ Avn+   +     k  ++++le++   ++   +  + +vvyc++g r++ a ++l + Gy n+ ++ G++ +w++
  EPX73894.1  44 AESKSPILIDVREPGEFEAGSINTAVNLpVGKLEDALKLGDKEFLETYGFRRP---SITDSIVVYCRSGARSTTASKILSEKGYDNIGNYTGSWLDWSA 139
                 2455556*********************4333444444444444444444444...469************999999******999***********97 PP

>> HSF_DNA-bind  HSF-type DNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.0     1e-05     0.089      45      71 ..      19      45 ..       7      68 .. 0.79
   2 ?    1.6   0.0     0.049   4.4e+02      53      63 ..      88      98 ..      85     132 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1e-05
                  -HHHHHHHHHHTTEEE---SSBTTB-- CS
  HSF_DNA-bind 45 nfssFvrqLnlYgFrkvkrkeekkkkk 71
                  + +sF+r+  +Y+F+kv++ +++ k +
    EPX73894.1 19 QTASFQRKVAIYDFEKVRELSKRAKAE 45
                  569*************99777643333 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.049
                  HHHTTEEE--- CS
  HSF_DNA-bind 53 LnlYgFrkvkr 63
                  L++YgFr+ + 
    EPX73894.1 88 LETYGFRRPSI 98
                  899****9432 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       345  (0.0192426); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.28s 00:00:00.69 Elapsed: 00:00:00.44
# Mc/sec: 969.50
//
Query:       EPX73895.1  [L=131]
Description: hypothetical protein SOCG_03114 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.7e-14   53.6   3.9    2.7e-14   53.6   3.9    2.0  2  DNA_repr_REX1B  DNA repair REX1-B
     0.0077   16.8   6.9      0.011   16.3   6.9    1.2  1  APG6_N          Apg6 coiled-coil region
  ------ inclusion threshold ------
       0.04   14.1   1.3       0.11   12.7   0.1    1.8  2  MIEAP           Mitochondria-eating protein
      0.089   12.8   6.7      0.041   13.9   4.0    1.7  2  DUF1664         Protein of unknown function (DUF1664)
        1.2    9.9   6.0        3.2    8.5   1.3    2.1  2  DUF2203         Uncharacterized conserved protein (DUF2203)
        3.9    7.6   9.2       0.44   10.6   3.5    2.2  2  Vps51           Vps51/Vps67
        5.8    7.7   9.2         26    5.6   0.5    3.0  3  RecG_N          RecG N-terminal helical domain


Domain annotation for each model (and alignments):
>> DNA_repr_REX1B  DNA repair REX1-B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.6   3.9   1.1e-17   2.7e-14       2      93 ..       4      92 ..       3      94 .. 0.94
   2 ?    2.1   0.2      0.12   3.2e+02      32      61 ..     102     131 .]      97     131 .] 0.82

  Alignments for each domain:
  == domain 1  score: 53.6 bits;  conditional E-value: 1.1e-17
  DNA_repr_REX1B  2 llrrflelqeeRaeiYkefeegfkaylk.sgaeeeykqlvkevTeefseiSkevleieaaLreeasredlaelirkvqekEkeKLelTaklqv 93
                    +++++l++q++R ++Ykefee++ka  + + + e++  +v+ vTe ++e+S ++++ +a L ++     l  +++++qe E++KL+ T k++ 
      EPX73895.1  4 TVQKILKAQDTRTQLYKEFEEALKANHEkTIGLEQMGIVVQLVTEGLNEVSLDIRKFQADLGSS----RLQSYVDQLQELEHSKLRKTIKIEQ 92
                    79**********************99986888999**************************995....9********************9976 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.12
  DNA_repr_REX1B  32 aeeeykqlvkevTeefseiSkevleieaaL 61 
                     +++e +ql +e+ +++ +i +++++i+++L
      EPX73895.1 102 NHSEIEQLKEEIHATIMKINDTIQSIKDEL 131
                     667788999999999999999999999876 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   6.9   4.1e-06     0.011      12     107 ..       3     122 ..       1     129 [. 0.88

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 4.1e-06
      APG6_N  12 eeldkqleqaekerdaYeeflkklkkekkeeek............................qdeeleeleeeleklekeeeelleeLkelekereelea 82 
                 e+++k l++++   + Y+ef++ lk+++++  +                             d    +l+  +++l++ e+++l++   ++ e+ +l +
  EPX73895.1   3 ETVQKILKAQDTRTQLYKEFEEALKANHEK--TigleqmgivvqlvteglnevsldirkfqADLGSSRLQSYVDQLQELEHSKLRKT--IKIEQLSLPS 97 
                 567888999999999**********99776..3579*********************999977778899999**********99876..556789**** PP

      APG6_N  83 elaaleeelealeeeeerfwreyne 107
                  +++ ++e e+l+ee ++ +++ n+
  EPX73895.1  98 NIEDNHSEIEQLKEEIHATIMKIND 122
                 ***************9999999887 PP

>> MIEAP  Mitochondria-eating protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   4.2e-05      0.11      60     137 ..       2      79 ..       1      84 [. 0.92
   2 ?    0.7   0.1      0.21   5.3e+02      65      98 ..      91     124 ..      78     129 .. 0.62

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 4.2e-05
       MIEAP  60 kervrkllstssadgsetkelssleeavsdylrkeadlydvksiveevisellktlkekpslkqe...kelesYirecvel 137
                 +e+v+k+l+ ++++++    ++++eea++    k+  l++++ +v+ v++ l +   + ++++++   ++l+sY+++  el
  EPX73895.1   2 EETVQKILKAQDTRTQL---YKEFEEALKANHEKTIGLEQMGIVVQLVTEGLNEVSLDIRKFQADlgsSRLQSYVDQLQEL 79 
                 7899******8888888...99****************************999999999999999999*******987665 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.21
       MIEAP  65 kllstssadgsetkelssleeavsdylrkeadly 98 
                 + ls +s+ + +  e+++l+e++   + k  d++
  EPX73895.1  91 EQLSLPSNIEDNHSEIEQLKEEIHATIMKINDTI 124
                 3455556666665568888888888877766665 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.75   1.9e+03      68      92 ..       5      29 ..       1      38 [. 0.53
   2 ?   13.9   4.0   1.6e-05     0.041      41     121 ..      41     128 ..      35     130 .. 0.71

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.75
     DUF1664 68 idrvdkkldeqkeiskeikeevtev 92
                ++++ k +d  +++ ke +e +++ 
  EPX73895.1  5 VQKILKAQDTRTQLYKEFEEALKAN 29
                4455555555555555555555544 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 1.6e-05
     DUF1664  41 davesvskqleqvseslaatkrhL.ssridrvdkkldeq..keiskeikeevtevredls....eigedvesvkeaveglesklerie 121
                  +v+ v++ l++vs ++++ + +L ssr+++  ++l+e   +++ k ik e  ++ ++++    ei++  e++++++++++ ++++i+
  EPX73895.1  41 IVVQLVTEGLNEVSLDIRKFQADLgSSRLQSYVDQLQELehSKLRKTIKIEQLSLPSNIEdnhsEIEQLKEEIHATIMKINDTIQSIK 128
                 57899*******************5689***999999761156777787666555555550000555555667777777777777775 PP

>> DUF2203  Uncharacterized conserved protein (DUF2203)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.3      0.02        51      46      83 ..      13      50 ..       1      64 [. 0.68
   2 ?    8.5   1.3    0.0013       3.2      28      77 ..      68     128 ..      46     130 .. 0.59

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.02
     DUF2203 46 seaaeleaeleeleaeieelveeieelGvevkdleagl 83
                +++++l +e+ee+ +  +e +  +e++G++v+ + +gl
  EPX73895.1 13 DTRTQLYKEFEEALKANHEKTIGLEQMGIVVQLVTEGL 50
                22667777888888888888888999999988887777 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0013
     DUF2203  28 eleeleeeleeakaeaekse...........aaeleaeleeleaeieelveeieelGvevk 77 
                 +l++ +++l+e ++++ +++            + +++e+e+l++ei++++ +i+++   +k
  EPX73895.1  68 RLQSYVDQLQELEHSKLRKTikieqlslpsnIEDNHSEIEQLKEEIHATIMKINDTIQSIK 128
                 4444444555555554444455554444544666667777777777777777666555555 PP

>> Vps51  Vps51/Vps67
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.2      0.57   1.5e+03      21      44 ..       5      28 ..       2      34 .. 0.53
   2 ?   10.6   3.5   0.00017      0.44       4      66 ..      65     130 ..      62     131 .] 0.78

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.57
       Vps51 21 lkellkveasllseiraldselka 44
                ++++lk + + ++  ++ ++ lka
  EPX73895.1  5 VQKILKAQDTRTQLYKEFEEALKA 28
                455555555555555554444444 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00017
       Vps51   4 pdfdaeayvr..ellakstlkellkvea.sllseiraldselkalVydnYskLisasdtIrkmkse 66 
                 +++  ++yv+  + l++s+l++++k+e+ sl s+i+++ se+ +l  + +   ++++dtI+++k+e
  EPX73895.1  65 GSSRLQSYVDqlQELEHSKLRKTIKIEQlSLPSNIEDNHSEIEQLKEEIHATIMKINDTIQSIKDE 130
                 667778899844458999998888888736678888888888888888888889999999999987 PP

>> RecG_N  RecG N-terminal helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.4     0.019        48      10      43 ..       2      35 ..       1      40 [. 0.75
   2 ?    1.9   0.1      0.14   3.7e+02      54      74 ..      68      88 ..      41      95 .. 0.65
   3 ?    5.6   0.5      0.01        26       2      33 ..      99     130 ..      98     131 .] 0.79

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.019
                HHHHTS---TTT........HHHHHHH---GGGG CS
      RecG_N 10 ekllkkvlsgkleteelieeikkkleliddplle 43
                e+ ++k+l+ +    +l +e+++ l++++++ + 
  EPX73895.1  2 EETVQKILKAQDTRTQLYKEFEEALKANHEKTIG 35
                5566666666666779*******99999988765 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.14
                HHHHHHTTSSSS-HHHHHHHH CS
      RecG_N 54 kfldYikpiasLpeeRkikRl 74
                ++ +Y+ ++++L++ + +k +
  EPX73895.1 68 RLQSYVDQLQELEHSKLRKTI 88
                456677777777766555544 PP

  == domain 3  score: 5.6 bits;  conditional E-value: 0.01
                 HHHHHHHHHHHHTS---TTT........HHHH CS
      RecG_N   2 iEeFLeelekllkkvlsgkleteelieeikkk 33 
                 iE+   e+e+l++++  + +++++ i+ ik++
  EPX73895.1  99 IEDNHSEIEQLKEEIHATIMKINDTIQSIKDE 130
                 78888888888888888888888888888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2038  (0.113671); expected 358.6 (0.02)
Passed bias filter:                      807  (0.0450109); expected 358.6 (0.02)
Passed Vit filter:                        72  (0.00401584); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.47u 0.30s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 893.84
//
Query:       EPX73896.1  [L=106]
Description: hypothetical protein SOCG_05064 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.019   15.1   5.6      0.019   15.1   5.6    2.1  2  zf-B_box  B-box zinc finger


Domain annotation for each model (and alignments):
>> zf-B_box  B-box zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   5.6     1e-06     0.019       4      31 ..      63      90 ..      60      92 .. 0.90
   2 ?    0.5   0.1     0.038   6.8e+02      12      21 ..      96     105 ..      94     106 .] 0.83

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1e-06
    zf-B_box  4 tkCpeHknkpatlfCedCqqplCeeCst 31
                  C+ +++  +   C  C  p+C +Cst
  EPX73896.1 63 GPCNFCETIALLHNCDRCTRPICRNCST 90
                67************************76 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.038
    zf-B_box  12 kpatlfCedC 21 
                 ++++  C dC
  EPX73896.1  96 EKTNARCLDC 105
                 7888999999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       570  (0.0317921); expected 358.6 (0.02)
Passed bias filter:                      238  (0.0132746); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.26s 00:00:00.62 Elapsed: 00:00:00.41
# Mc/sec: 778.10
//
Query:       EPX73897.1  [L=905]
Description: ATP-dependent DNA helicase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.5e-67  226.8   0.2    4.5e-67  226.8   0.2    3.3  2  UvrD-helicase    UvrD/REP helicase N-terminal domain
    4.5e-66  223.6   0.5      1e-65  222.5   0.5    1.6  1  UvrD_C           UvrD-like helicase C-terminal domain
    4.2e-32  111.5   0.0    1.3e-31  109.9   0.0    1.9  1  AAA_19           AAA domain
    4.4e-12   45.6   0.0    9.8e-12   44.5   0.0    1.6  1  UvrD_C_2         UvrD-like helicase C-terminal domain
    3.1e-06   27.0   0.0    0.00044   19.9   0.0    3.0  2  AAA_12           AAA domain
    5.7e-06   26.3   4.8      0.029   14.1   0.0    3.8  4  Viral_helicase1  Viral (Superfamily 1) RNA helicase
    0.00018   21.4   0.1    0.00018   21.4   0.1    3.3  3  AAA_11           AAA domain
    0.00024   20.9   0.0      0.034   13.9   0.0    2.3  2  AAA_30           AAA domain
  ------ inclusion threshold ------
      0.045   13.3   0.1       0.11   12.0   0.1    1.7  1  Prenyltransf     Putative undecaprenyl diphosphate synthase
       0.49   10.7   2.2         11    6.3   0.6    2.9  2  AAA_22           AAA domain


Domain annotation for each model (and alignments):
>> UvrD-helicase  UvrD/REP helicase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  226.8   0.2   2.5e-70   4.5e-67       1     315 []      11     290 ..      11     290 .. 0.93
   2 ?  -14.2  17.4        10   1.8e+04     209     209 ..     564     564 ..     428     896 .. 0.58

  Alignments for each domain:
  == domain 1  score: 226.8 bits;  conditional E-value: 2.5e-70
                    SSHHHHHHHHS-SSEEEEEE-TTSSHHHHHHHHHHHHHHTSSSTGGGEEEEESSHHHHHHHHHHHHHHHHHCCHHCTT-HHHHHHHHHCTTSEEEE CS
  UvrD-helicase   1 lnpeqreaiaslggpilveAsAGsGKTfvlaerilrlikeeeiepdrilvvTFTnkAaeElkeRieealkkaeqessdderlrlalqnlseanisT 96 
                    ln++qr  ++s ++ + ++A++GsGKT+vl++ri++l++ ++++p+++lv TFTnkAa+E+k+Ri+++l++++                s++  +T
     EPX73897.1  11 LNTQQRLSVESDHKYTQILAGPGSGKTRVLTSRIAYLLQVANCNPRDLLVATFTNKAANEIKQRIHTLLGNEK---------------SSKIISGT 91 
                    699********************************************************************95...............79****** PP

                    HHHHHHHHHHHHHGGTTSHTTTEEECHHHHHHCCHHHHHHHHHSCHSHTTTTHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHCHHHHHHHHHHHT CS
  UvrD-helicase  97 lHsfcqkilkkeanrigldpnfrildeedeedlkqqellkelleksaddslnldkkkleklikelsksrnikkeelslskskaeelrelvskakek 192
                    +Hs+++k+l  + ++igl +++ ++d +d     +++++k+ll++ ++++ ++++                       ++  +e++   +sk+k++
     EPX73897.1  92 FHSIAYKYLSVYGKHIGLSSKWLVADRSD-----VKSIVKRLLTSLKKADNEIASGIRG-------------------QELTPENVLTRISKMKSS 163
                    *****************************.....9999999998766666666666655...................456799999999999999 PP

                    TCCTTHHCHSS........TSCSHHHHHHHHHHHHHHHHHHHHTCEEHHHHHHHHHHHHHHCHHHHHHHHHHSSEEEESSGGG-BHHHHHHHHHHH CS
  UvrD-helicase 193 qlspkelkkaf........ekasdlqkkiaeflkeyqeqkkeenalDfsdllhallelleeneelaealrerykeiliDEyQDTnkiQyrilklla 280
                     l +k++ ++         ++ + ++++  e++k yq++++++n++Df+dll+ ++ ll+e +     +  ++k+iliDE+QDT++iQy +lklla
     EPX73897.1 164 GLLAKSNSPELillpgmdaPSPELQSYQSTELYKLYQTTLRKNNLMDFDDLLLHFILLLREYPM----CIANIKHILIDEFQDTSRIQYYLLKLLA 255
                    9999999998899999998999999************************************665....667789********************** PP

                    TTTTTEEEEE-GGG--GGGGTB-THHHHHHHHHST CS
  UvrD-helicase 281 sgheelfmvGDpkQsIYgFRgAdielflkkkkdfk 315
                    +++  +++vGDp+QsIYgFR A+ie++++++kdf+
     EPX73897.1 256 KNETAITIVGDPDQSIYGFRSAEIENLNRMTKDFQ 290
                    ********************************996 PP

  == domain 2  score: -14.2 bits;  conditional E-value: 10
                    H CS
  UvrD-helicase 209 l 209
                    l
     EPX73897.1 564 L 564
                    0 PP

>> UvrD_C  UvrD-like helicase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  222.5   0.5   5.6e-69     1e-65       2     348 ..     296     644 ..     295     645 .. 0.83

  Alignments for each domain:
  == domain 1  score: 222.5 bits;  conditional E-value: 5.6e-69
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      UvrD_C   2 vLekNyRStksLlkaankflenilnrralekek...ktvekgekivvleaeteeeEaekiaatikall...ekneklediavLvRsnkdadkiskaLkk 94 
                 +Le NyRS  s+l++a +++++ + r    ++k   ++ + + +  ++++et+++E+ +ia +ik+++    + + ++d+a+LvRs + ++++++aL +
  EPX73897.1 296 NLEMNYRSAHSILELALSIISQDKTR----PQKgikSDYSMSLRPSYRTFETNQKESYWIACEIKRIVeccPELFTYDDVAILVRSGSLTRSLEHALTE 390
                 69******************999999....4444448888899*************************99999************************** PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      UvrD_C  95 egipfnvvdeekfFkreeikdilaylkllankqdkialkrilkrlvlgigkatveriseelkklglsltDfikedtleygeeFieliraleeknlelll 193
                  g+++++v+ +kfF+ree++d+ ay +++an+ d ++l ril+++ ++igk++++r++ee++++ l l + + + +    e++i l +  ++  l   l
  EPX73897.1 391 VGVSYRMVGVHKFFDREEVRDMVAYARVVANR-DPTSLIRILNTPARNIGKTKIDRLLEETERRNLPLWEILVQVS----ENYILLSQRQDKSFL-KSL 483
                 *******************************9.************************************9997765....889955555555444.355 PP

                 xx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxx RF
      UvrD_C 194 kk.iektaeerqalvskyadlfkelaeklaelkeks..eskrkkee..klenlreLysllkelekkeeeeeveek.....lneileiatLseseleesk 282
                 k  i+  ++  ++ + +++   + l++ l+e+k      +k+++++  k++n++eL+ + + l +++e   v e      l ++l + tL++s++ee k
  EPX73897.1 484 KTfIRMIEDLDKESRDNNKSVSELLSSILHEIKYYDflRKKNPETYdeKWDNVMELVHQSDILAQQDELSLVDEGpeeipLHKFLAHVTLASSDKEEDK 582
                 554555555555555554444444444444444332102223333356**********9999988665555444488889************9995554 PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      UvrD_C 283 kkekipiiTiHqAKGlEFdvVflagleegtfPsyrskkekrleEEkRlfYVaiTRAkkrLfisysk 348
                   +k++i+T+H+AKGlE+++Vfl +++e+++P++r   +++++EE+Rl+YV+iTRA+  L+is  +
  EPX73897.1 583 -SSKVTISTLHAAKGLEWPIVFLPCVCENIIPHSR---SDDVDEERRLLYVGITRAQALLYISSFQ 644
                 .4******************************888...6677*********************876 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.9   0.0   7.2e-35   1.3e-31       2     146 .]      16     275 ..      14     275 .. 0.95

  Alignments for each domain:
  == domain 1  score: 109.9 bits;  conditional E-value: 7.2e-35
      AAA_19   2 reavealkekvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAakelrerlaalgae.......atTiHrlal................ 77 
                 r  v ++ +k   ++aGpG+GKTrvl+ ++a+l+++ + +p+++l+++ft++Aa+e+++r+++l+++         T+H++a                 
  EPX73897.1  16 RLSV-ESDHKYTQILAGPGSGKTRVLTSRIAYLLQVANCNPRDLLVATFTNKAANEIKQRIHTLLGNeksskiiSGTFHSIAYkylsvygkhiglsskw 113
                 4556.889999**************************************************9999989*****999*****99**************** PP

      AAA_19  78 ...............................................................................................ldfd 81 
                                                                                                                +dfd
  EPX73897.1 114 lvadrsdvksivkrlltslkkadneiasgirgqeltpenvltriskmkssgllaksnspelillpgmdapspelqsyqstelyklyqttlrknnlMDFD 212
                 *************************************************************************************************** PP

      AAA_19  82 dlltealelleeaeeekklqeeellivDEfqdvdelqyrLlkallgekkklllvGDpdQliyvfr 146
                 dll +   ll+e      + + +++++DEfqd++  qy Llk l+++++ +++vGDpdQ+iy fr
  EPX73897.1 213 DLLLHFILLLRE--YPMCIANIKHILIDEFQDTSRIQYYLLKLLAKNETAITIVGDPDQSIYGFR 275
                 ***777777774..456675667**********************99999************997 PP

>> UvrD_C_2  UvrD-like helicase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.5   0.0   5.5e-15   9.8e-12       2      51 ..     586     640 ..     585     641 .. 0.79

  Alignments for each domain:
  == domain 1  score: 44.5 bits;  conditional E-value: 5.5e-15
    UvrD_C_2   2 ayaltihkaQGsefpaVivfdpdlaaarmgel.......rrrlLYtavTRAreklil 51 
                 ++++t h a+G+e+p+V++  p  ++   ++         rrlLY+++TRA++ l++
  EPX73897.1 586 VTISTLHAAKGLEWPIVFL--PCVCENIIPHSrsddvdeERRLLYVGITRAQALLYI 640
                 6899**************9..555544333223455788****************98 PP

>> AAA_12  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0     0.026        47      15      73 ..     292     354 ..     280     392 .. 0.77
   2 !   19.9   0.0   2.5e-07   0.00044     134     194 ..     577     640 ..     495     644 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.026
      AAA_12  15 ekvvlLdtqYRmhpeIsrfpsklfYkgkLkdaesvkkrele....aqealeepleplvfidve 73 
                 +++  L+++YR+ ++I++++ + + ++k + ++ +k++ ++     ++++e+ +++ ++i++e
  EPX73897.1 292 TQILNLEMNYRSAHSILELALSIISQDKTRPQKGIKSDYSMslrpSYRTFETNQKESYWIACE 354
                 5677899***********999999998887777665555554555567777777777777775 PP

  == domain 2  score: 19.9 bits;  conditional E-value: 2.5e-07
      AAA_12 134 keeeksekeievntvdgfQGrekdviilslVRsn...ekkeigflkderrlNValTRAksklii 194
                 ++ee+++++++++t  +  G e+ +++l +V  n   ++++    +++r l V +TRA+  l+i
  EPX73897.1 577 DKEEDKSSKVTISTLHAAKGLEWPIVFLPCVCENiipHSRSDDVDEERRLLYVGITRAQALLYI 640
                 334444556*************************995333334566777789********9988 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.4   0.0    0.0074        13       4      59 ..      29      84 ..      26      89 .. 0.67
   2 !    6.7   0.1     0.003       5.4      49     113 ..     221     283 ..     187     348 .. 0.75
   3 !   14.1   0.0   1.6e-05     0.029     157     232 ..     556     640 ..     510     642 .. 0.73
   4 ?   -3.2   0.5       3.1   5.6e+03     109     180 ..     808     875 ..     796     884 .. 0.46

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0074
  Viral_helicase1  4 hGvpGcGKStlirkllrtsliltvnrptaelltegk.pklpnlsvrtvdsflmalvk 59
                      + pG+GK++++ + +   l++   +p   ll + + +k+ n+   ++ ++l + + 
       EPX73897.1 29 LAGPGSGKTRVLTSRIAYLLQVANCNP-RDLLVATFtNKAANEIKQRIHTLLGNEKS 84
                     577***********9977444444444.33333333588888888888888777654 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.003
  Viral_helicase1  49 tvdsflmalvkstkgkililDEylllhaGyill..laalskaklvilfGDplQipfhsrnasfllah 113
                       ++++ m   +    k +++DE++   + + +l  l+a+++   + ++GDp Q+ +  r+a++++ +
       EPX73897.1 221 LLREYPMCIAN---IKHILIDEFQDTSRIQYYLlkLLAKNET-AITIVGDPDQSIYGFRSAEIENLN 283
                      55566665443...578999***9988766665455666664.7899*********99988666554 PP

  == domain 3  score: 14.1 bits;  conditional E-value: 1.6e-05
  Viral_helicase1 157 etepkgqe..kvlvyltftqalkealgvr..evttvhevqGltfdkVtlvllketdlelis.......esrenllvAlTRhrkslvi 232
                      +  p++ +  k l+  t + ++ke+ +++   ++t h + Gl+++ V l +  e+   +         e+r  l+v++TR+   l+i
       EPX73897.1 556 DEGPEEIPlhKFLAHVTLASSDKEEDKSSkvTISTLHAAKGLEWPIVFLPCVCENI--IPHsrsddvdEERRLLYVGITRAQALLYI 640
                      44444444455566666666666666666666****************98876653..222456777778***********988876 PP

  == domain 4  score: -3.2 bits;  conditional E-value: 3.1
  Viral_helicase1 109 fllahlpsslshrvgrrttyllpsdvaeilsakvgteveversgelkvetepkgqekvlvyltftqalkeal 180
                      f +ah +s   +  +r++t +  s   +++ +    +++ ++s++++  + p  +ek+ ++   ++++kea 
       EPX73897.1 808 FNRAHGISVK-DIGKRKITRRMVSTEKPVKHEE---TSSFSSSSSFQQPMRPLNHEKTDQLKDTVKNEKEAI 875
                      3444433333.5555555555555555555554...333333333322333333335555555555555554 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.1     1e-07   0.00018       3      80 ..      12      80 ..       9     147 .. 0.82
   2 ?   -1.2   0.2      0.79   1.4e+03     121     182 ..     455     505 ..     400     592 .. 0.58
   3 ?   -9.1  10.8        10   1.8e+04      95     182 ..     830     869 ..     634     898 .. 0.63

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 1e-07
      AAA_11  3 ndsqreaiksalseseitliqGPPGtgKTktivellsqllsrrkseeeksakpriLvCapSNaAvDellerllrglld 80
                n +qr +++s  + +  +++ GP G+gKT+++++ +++ll     + ++++++ +Lv++ +N+A +e+ +r+ + ll 
  EPX73897.1 12 NTQQRLSVESDHKYT--QILAGP-GSGKTRVLTSRIAYLL-----QVANCNPRDLLVATFTNKAANEIKQRIHT-LLG 80
                555555555544444..355665.***************4.....5679**********************998.222 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.79
      AAA_11 121 e................kaqlakeiskeleklakelrafeeeeekeklkkskekskskleqerrklkkerkelskele 182
                                  ++++ k+  k+l++  +++++ ++e                           +++++k++ 
  EPX73897.1 455 LplweilvqvsenyillSQRQDKSFLKSLKTFIRMIEDLDKE---------------------------SRDNNKSVS 505
                 344444444444444443333333333333333333222222...........................222222222 PP

  == domain 3  score: -9.1 bits;  conditional E-value: 10
      AAA_11  95 nee.eriseavksvsleekvekrlekeekaqlakeiskeleklakelrafeeeeekeklkkskekskskleqerrklkkerkelskele 182
                 + e +  +e+++s+s ++++++ +                                                 r   +++ ++l+++++
  EPX73897.1 830 STEkPVKHEETSSFSSSSSFQQPM-------------------------------------------------RPLNHEKTDQLKDTVK 869
                 111222223333333222222222.................................................2222222222222222 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.0   1.9e-05     0.034      14      67 ..      19      76 ..      10     130 .. 0.73
   2 ?    4.6   0.0     0.013        24      90     128 ..     233     270 ..     202     325 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.9e-05
      AAA_30 14 ltsgdrvavltGpAGtGKttalkal.reaweaag...grviglAptgkaAkvLaeelg 67
                ++s+++++ + +++G+GKt +l++  + +++ a+   +++++++ t+kaA+++++ + 
  EPX73897.1 19 VESDHKYTQILAGPGSGKTRVLTSRiAYLLQVANcnpRDLLVATFTNKAANEIKQRIH 76
                46778899999**********9876244444444677****************96543 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.013
      AAA_30  90 tllivDEagmvdtkqlaallkaaekagakvilvGDerQl 128
                 + +++DE   ++  q   llk ++k+++ + +vGD++Q 
  EPX73897.1 233 KHILIDEFQDTSRIQY-YLLKLLAKNETAITIVGDPDQS 270
                 6788999887777776.5888888889***********5 PP

>> Prenyltransf  Putative undecaprenyl diphosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   6.3e-05      0.11      77     180 ..     252     382 ..     233     413 .. 0.67

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 6.3e-05
                   HHHHHTTEEEEEESSGGG.S-HHHHHHHHHHHHHHT.TTTSEEEEEEEEE-HHHHHHHHHHHHHHTT..SSSG.................GGHSH.. CS
  Prenyltransf  77 kellkegvrvrviGdlel.lpedvlealekaeeatkknnkklvlniavnYgsrdeiveavrelvkekseekkk.................eeide.. 153
                   k l+k++  ++++Gd ++ +     +++e++ ++tk+ + + +ln+ +nY s + i+e + +++++ +++ +k                 e   +  
    EPX73897.1 252 KLLAKNETAITIVGDPDQsIYGFRSAEIENLNRMTKDFQGTQILNLEMNYRSAHSILELALSIISQDKTRPQKgiksdysmslrpsyrtfE---Tnq 345
                   456777999999**9885155555678*********988889****************988887666533333333333333333333330...033 PP

                   .............HHHHCTSTT..TSSS-SEEEEESS--S CS
  Prenyltransf 154 .............etlekhlytakalpdpDlliRtsGeeR 180
                                 +   +l t   + d+ +l+R++  +R
    EPX73897.1 346 kesywiaceikriVECCPELFT---YDDVAILVRSGSLTR 382
                   3344444333212222222333...577888888777666 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.6    0.0063        11      39     131 ..     171     267 ..      20     270 .. 0.76
   2 ?   -3.2   0.0       5.2   9.3e+03      52      85 ..     482     514 ..     439     518 .. 0.59

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0063
      AAA_22  39 rpevv...fvtlpsst....sskdllrellralglelkaerlsseellealeqalrarav....ielliiDEaqhlrseealeeLrsllnlsrkgvqli 126
                 +pe++    +++ps++     s++l++     l  ++     + ++ll ++   lr++ +    i+ ++iDE+q   s  ++  L+ l++     +++ 
  EPX73897.1 171 SPELIllpGMDAPSPElqsyQSTELYKLYQTTLRKNNL---MDFDDLLLHFILLLREYPMcianIKHILIDEFQDT-SRIQYYLLKLLAK---NETAIT 262
                 45555555666666664444444444444444444333...47788888888888888889999999999999999.7777777766655...666666 PP

      AAA_22 127 LvGtp 131
                 +vG p
  EPX73897.1 263 IVGDP 267
                 66665 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 5.2
      AAA_22  52 sskdllrellralglelkaerlsseellealeqa 85 
                 s+k++ r++    ++++++ ++s +ell+ + + 
  EPX73897.1 482 SLKTFIRMIEDLDKESRDN-NKSVSELLSSILHE 514
                 5555555554444444444.66777777666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (905 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       918  (0.051202); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.74u 0.30s 00:00:01.04 Elapsed: 00:00:00.50
# Mc/sec: 5454.72
//
Query:       EPX73898.1  [L=310]
Description: hypothetical protein SOCG_03116 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-90  302.5   0.3    2.5e-90  302.3   0.3    1.0  1  Memo      Memo-like protein


Domain annotation for each model (and alignments):
>> Memo  Memo-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  302.3   0.3   1.4e-94   2.5e-90       2     271 .]       7     309 ..       6     309 .. 0.95

  Alignments for each domain:
  == domain 1  score: 302.3 bits;  conditional E-value: 1.4e-94
        Memo   2 aavAGsfYpedeeelkkqleeflekntgkkei..arviisPHagyvysgevaakayaelesskvervvilGpsHtilgskvsvlaaseleTPlGdlkvD 98 
                 a++AGs+Y e++  l+kq     e +     i  +r+iisPHagy+ysg++a +a++++++s+ erv++lGpsH+++++k++v++a+++eTP+G+l vD
  EPX73898.1   7 ATHAGSWYIENPTLLEKQFVGLSETSDSV--IdgKRFIISPHAGYMYSGKIANQAFQRIDFSNKERVFVLGPSHHVFTRKCLVTQAEACETPFGNLTVD 103
                 89****************99544444444..345***************************************************************** PP

        Memo  99 eelveeLvkk.eeiadldetaa.laEHSlEvqlpfLkellkek....kfkivPilvsaqseetakevgealakvikdesnlviiSsDlsHygrrFg... 188
                 +e+++ ++++ +++++ +  +a ++EHS+E+q+p+L+++l+++    k+kivPi+++a s+e  ++++++l ++i de+n++i+SsD++H+grrFg   
  EPX73898.1 104 QEVCQDIMEQnDNCFNEMSLEAdEQEHSIEMQFPLLAYHLRKQgcldKVKIVPIMIGALSSEAIQTAANILCNYIVDENNAFIVSSDFCHWGRRFGytm 202
                 *****987651677999999989**************************************************************************** PP

        Memo 189 .....................spqeiaesie..DrevikaleelneeelkeylektnnticGekpiavilkalkklga.kkakllkYaqssdvtsdtds 263
                                      ++ +i+esi+  D+ +++ ++ +++++++ey+  t nticG++pi +ilk+++ +++ +++++++Y+qs+++ s+ ds
  EPX73898.1 203 ylnekneledaiigfrrkgsiENPKIYESIStiDHMGMDIISMKSSHDFSEYIRLTHNTICGRYPIQLILKSMELAQVaNQFEFIAYSQSNHAISVSDS 301
                 *********************999******99********************************************9989******************* PP

        Memo 264 vVsyaslv 271
                 +Vsya++v
  EPX73898.1 302 SVSYAAAV 309
                 *****975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       600  (0.0334653); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 2120.94
//
Query:       EPX73899.1  [L=649]
Description: glucan 1,4-alpha-glucosidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-69  235.2   0.0    1.3e-68  231.9   0.0    2.0  1  Glyco_hydro_15  Glycosyl hydrolases family 15
  ------ inclusion threshold ------
      0.084   12.9   0.1       0.17   11.9   0.1    1.4  1  DUF1147         Protein of unknown function (DUF1147)


Domain annotation for each model (and alignments):
>> Glyco_hydro_15  Glycosyl hydrolases family 15
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  231.9   0.0   1.4e-72   1.3e-68       1     415 [.     254     604 ..     254     636 .. 0.92

  Alignments for each domain:
  == domain 1  score: 231.9 bits;  conditional E-value: 1.4e-72
                     HHHHHHHHHCBCSTTSSBTTS-TT-B-S-S-BSSS.........B--SEEHHHHHHHHHHHH.......HHHHHTTT-HCCH.HHHHHHHHHHHH CS
  Glyco_hydro_15   1 gvrldlylrnvktlilleqnpvtGlliASpstsdp.........DYrytWvRDsvyvilavwglgyrdedrakayeleqslv.klmrglleamvr 85 
                     g+++++++rn+ tl+ll+++p tG+++ASp+ s+p         DYr+tW+RDs+++i a+++lg+r e+ ++++ + + l+ k   g ++ +++
      EPX73899.1 254 GRYREFVQRNALTLKLLIYEP-TGAVVASPTFSLPedlggvrnwDYRFTWIRDSAFTIYALAQLGFRTEAVEYMSFIYHLLKeKNPDGGINVVYS 347
                     57899****************.*********************************************999999999999886256788******* PP

                     HCTS-BTTB-TTSCGGGG--EE-TTS-B--S-..-S--BTTHHHHHHHHHHHHHCTTHCHCCCCHHHHTHHHHHHHHHHHTTS-EE-TTS--ECE CS
  Glyco_hydro_15  86 qagkvekfketqstkgLhakyftktgstvvGddewghlQlDatslyllalaqmtasglqiistldevafvqnlvdYieaayktpdfglWEenqge 180
                     + g+   ++e ++t   h++++  + ++++G+ ++ h+QlD++++ + a++ + ++++ i ++l+    v+ +++Y++ ++k+pd+ +WE++++e
      EPX73899.1 348 IRGNTDGLEEKELT---HLRGYHDSRPVRIGNGAVSHVQLDIYGELMDAIYIYDKKCQPIAYDLWLE--VRDICEYVCDNWKRPDKSIWEVRGQE 437
                     **************...**************************************************..************************** PP

                     EHH..HHHHHHHHHHHHHHHHHHCT-HHHHCC.HHHHHHHHHHHHHSTTT..GGGEETTCCECECSCH.....HHHTTS--S-BCHHHHHHHHCS CS
  Glyco_hydro_15 181 selnassvgmakAlleaideadlfgakgdaql.vektkdeilnklqgkygckrgfwplfntylildgsfaedkeqvqeyrealdasllllpelyf 274
                     +++ +s+++ ++Al++a+++a +    + +++ + +t+dei++++     ++ g+  +++ + + ++             + lda +l++p++ f
      EPX73899.1 438 KNFLYSKIMLWVALDRALRIAFSRSLPCPKRTkWMDTRDEIYETI-----MTLGYNSEGGFFAQSFET-----------INILDAGVLVMPMVSF 516
                     ****************************98877************.....999**************9...........9*************** PP

                     -TTS-TT-TT-TTTSHHHHHHHHHHHHHHHHHSGGGTT-STTS--SBTT--CGSSSBSCT--BHHHHHHHHHHHHHHHHHHHHHTE-EEEECCCH CS
  Glyco_hydro_15 275 vpaddvdeeyqnpqsprllaqslyildsllsegflavgeldplvrRysedvkpdklglsGrpyylctlwtvetlldelyekagkgrlwglvryal 369
                     +++ d          pr+l+++++i++ l++ g++++g     + Ry++  ++d++g++++++ + ++w     l e++++ag+ ++ +l+++a+
      EPX73899.1 517 ISPTD----------PRFLSTMDNIMKPLEKSGLMSNGL----IFRYNNFAYEDGVGGDEGAFTMVCFW-----LVEALAMAGCRGYPKLISTAV 592
                     *****..........********************9996....**************************.....99999999999********** PP

                     HHHHHHTTTTTGGGSSEEETCHHHHHHHHHHHHHHHHHHHHHHS-T CS
  Glyco_hydro_15 370 glleklveskqltvGlpperesvisaplpveeladliveaveedns 415
                     +++e+l++                                   + +
      EPX73899.1 593 SMFEDLARY----------------------------------SSH 604
                     ******998..................................222 PP

>> DUF1147  Protein of unknown function (DUF1147)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   1.9e-05      0.17      36      56 ..     563     583 ..     555     585 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 1.9e-05
     DUF1147  36 GmvtmvkkwlllmtfmaGcrG 56 
                 G  tmv  wl+    maGcrG
  EPX73899.1 563 GAFTMVCFWLVEALAMAGCRG 583
                 789*****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (649 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       442  (0.0246528); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.26s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 4539.24
//
Query:       EPX73900.1  [L=393]
Description: DNAJ domain-containing protein Caj1/Djp1 type [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.4e-55  188.0   0.4    1.4e-55  188.0   0.4    2.2  3  DnaJ-X         X-domain of DnaJ-containing
    2.1e-26   91.8   0.5    2.1e-26   91.8   0.5    2.7  4  DnaJ           DnaJ domain
     0.0025   16.6   7.0     0.0037   16.0   7.0    1.2  1  Peptidase_S46  Peptidase S46
     0.0069   16.0   3.0      0.086   12.4   0.0    2.4  2  RAG1_imp_bd    RAG1 importin binding
  ------ inclusion threshold ------
      0.086   12.1   1.9       0.12   11.6   1.9    1.1  1  Asp1           Accessory Sec system protein Asp1
       0.12   12.8   0.2       0.57   10.6   0.0    2.1  2  DUF4062        Domain of unknown function (DUF4062)
       0.19   12.1  10.9       0.12   12.8   7.7    2.4  2  TBCA           Tubulin binding cofactor A


Domain annotation for each model (and alignments):
>> DnaJ-X  X-domain of DnaJ-containing
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   1.7      0.58   1.5e+03      97     131 ..     108     159 ..      98     170 .. 0.53
   2 !  188.0   0.4   5.5e-59   1.4e-55       1     211 []     171     371 ..     171     371 .. 0.96
   3 ?   -6.4   2.4         7   1.8e+04     124     129 ..     378     383 ..     373     390 .. 0.28

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.58
      DnaJ-X  97 vssaldaqstmee.lakeqekk................keeekeeeeeteee 131
                 v+ +++  ++m++ ++++++++                +e  k+ +  + e+
  EPX73900.1 108 VREMFREEEAMQDeMTQMNKQQlllesgeatptikqqfNERRKNAQIREREA 159
                 5555555566665455555555666777766666555433333333333333 PP

  == domain 2  score: 188.0 bits;  conditional E-value: 5.5e-59
      DnaJ-X   1 qeereeeLakkLrekLspyveadkke.etesFkkkleeeaesLkmesFGleilhtIGkiYknkAksflkskqkflglgglfssvkekgrvvkdtfktvs 98 
                 +++r+ e++k+L+++++ ++e++++e   +  +++ ++e+e L  esFG+eil+++G++Y++kA++++ks  + +g+gg++s++kekg+ ++dt+ t+s
  EPX73900.1 171 RKKRISEVTKNLQNRVDGWIEKSSTEeGLQGVREQYRKEVETLRIESFGVEILQAMGDVYTQKARNTIKS--SKFGIGGFWSRMKEKGKIARDTWDTLS 267
                 689*******************998889******************************************..557************************ PP

      DnaJ-X  99 saldaqstmeelakeqekkkeeekeeeeeteeelaemekkllgkvLaaawkgskfeIestlrevcdkvLkDksvdketrlkRAeaLkilGeifqkakrt 197
                 +a+da+ ++ +++k + k       +e  t+ee+a++e++++gkvL a w g +++I+++lr++c+++L+ k+v+ e r+kRA aL+ +G+if++++++
  EPX73900.1 268 AAMDAKFSIDQMQKLESKA------DEATTPEERAKLEMDITGKVLRASWCGARYDIQGVLRDACNSLLR-KTVPVELRMKRAYALLEIGTIFSQVEAD 359
                 ***************9999......9*******************************************5.99************************** PP

      DnaJ-X 198 ekeeeearvfeelv 211
                 +++    rvfe+l+
  EPX73900.1 360 PDD--PHRVFENLI 371
                 *98..577899875 PP

  == domain 3  score: -6.4 bits;  conditional E-value: 7
      DnaJ-X 124 eeeete 129
                 ++++++
  EPX73900.1 378 KKKKNK 383
                 111111 PP

>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.8   0.5   8.4e-30   2.1e-26       1      63 []       6      69 ..       6      69 .. 0.99
   2 ?   -3.0   0.1       3.3   8.3e+03      46      59 ..     161     174 ..     148     184 .. 0.57
   3 ?   -3.1   0.0       3.6   9.3e+03      16      23 ..     201     208 ..     191     211 .. 0.68
   4 ?   -3.9   0.2       6.5   1.7e+04      52      61 ..     371     380 ..     371     382 .. 0.73

  Alignments for each domain:
  == domain 1  score: 91.8 bits;  conditional E-value: 8.4e-30
                HHHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHH.HHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ  1 dyYeiLgvskdasedeIkkaYrklalkyHPDknpkdp.eaeekFkeineAyevLsdpekRkqYD 63
                +yY+iLgvs+d s+ +IkkaYrkla+kyHPDknp+dp  a+e+F++i+eAy+vL d++ R++YD
  EPX73900.1  6 EYYDILGVSPDVSSLDIKKAYRKLAVKYHPDKNPEDPqGASERFQKISEAYQVLGDEQLRSRYD 69
                59***********************************9*************************9 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 3.3
                 HHHHHHHHTSHHHH CS
        DnaJ  46 ineAyevLsdpekR 59 
                 i++  ++  d +kR
  EPX73900.1 161 IQREQQMIEDRKKR 174
                 44444555555554 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 3.6
                 HHHHHHHH CS
        DnaJ  16 eIkkaYrk 23 
                  ++++Yrk
  EPX73900.1 201 GVREQYRK 208
                 48999998 PP

  == domain 4  score: -3.9 bits;  conditional E-value: 6.5
                 HHTSHHHHHH CS
        DnaJ  52 vLsdpekRkq 61 
                 +L d++k+k+
  EPX73900.1 371 ILEDKKKKKK 380
                 6888888875 PP

>> Peptidase_S46  Peptidase S46
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   7.0   1.5e-06    0.0037     350     542 ..     109     299 ..      96     308 .. 0.76

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.5e-06
                    TTHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSHHHHHHHHHHHHHHHHH....HH-HHHHHHHHHHHHHHCHHHHCS--HHHHHHHHHHHHHHHHH CS
  Peptidase_S46 350 gkalselealvkekrklaersalleeaessgsellslarklvrlaeerekpdaereeeyqeralealekeleridkdldaevdkavlaallkeyre 445
                     +++ e ea+++e +++++++ lle+ e++ +   ++ ++ ++++  ++ +  +re+++ e++ +++++  ++ ++++d +++k   +  l+ +re
     EPX73900.1 109 REMFREEEAMQDEMTQMNKQQLLLESGEATPTIKQQFNERRKNAQIREREASIQREQQMIEDRKKRISEVTKNLQNRVDGWIEKSSTEEGLQGVRE 204
                    567788899999**************999996666666666666666666899******************************************* PP

                    HS-GGG--S----SS......-S-SHHCCCCC-TTSSCHHHHHHT-SHHCHHHHCC-HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH CS
  Peptidase_S46 446 klkaerlpavdkvlgkeskgdlealvdrlvakskladeakrkalleeakaaveaskDplielavaladaraalekaekelegklekarreyakall 541
                    ++++e      + +g e  +++ ++ ++  +++  +++  +  ++++ k++ +  +D    l++a+  + +  + +  +le+k ++a+    +a l
     EPX73900.1 205 QYRKEVETLRIESFGVEILQAMGDVYTQKARNTIKSSKFGIGGFWSRMKEKGKIARDTWDTLSAAMDAKFSIDQMQ--KLESKADEATTPEERAKL 298
                    *999988888889999987777777777777777777777888887777777777777777777776666554333..444444444444444444 PP

                    H CS
  Peptidase_S46 542 a 542
                    +
     EPX73900.1 299 E 299
                    4 PP

>> RAG1_imp_bd  RAG1 importin binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   1.9     0.046   1.2e+02      15      88 ..      98     175 ..      95     187 .. 0.62
   2 !   12.4   0.0   3.4e-05     0.086      69     137 ..     264     333 ..     248     337 .. 0.82

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.046
                  XXXXXXXXXXXXXXXXXXXXXX...XXXX.XXXXXXXXXXXXXXX...XXXXXXXXXX.XXXXXXXXXXXXXXXXXXX CS
  RAG1_imp_bd  15 fseWKFKLFrvrslekapeese...tekekkaelaasleakpeveldkesaageksvl.klcllkkskenvekkrvdl 88 
                  f eW   L  vr + ++ e  +   t+ +k++ l  s ea+p+++++ ++ ++++++  +++ ++++++ +e++++ +
   EPX73900.1  98 FREWVGELSFVREMFREEEAMQdemTQMNKQQLLLESGEATPTIKQQFNERRKNAQIReREASIQREQQMIEDRKKRI 175
                  778888888899987744444300144445556667888899998887777666555414556677777777555544 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 3.4e-05
                  XXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  RAG1_imp_bd  69 lklcllkkskenve.kkrvdlklqeietHmakLrqlCRlCGaslkkdvknrsyevhgpldekskvllRkk 137
                   +l +++  k +++  ++ + k+ e++t  ++ +    + G++l++   + +y+++g l ++ ++llRk 
   EPX73900.1 264 DTLSAAMDAKFSIDqMQKLESKADEATTPEERAKLEMDITGKVLRASWCGARYDIQGVLRDACNSLLRKT 333
                  45566666777777556778899999999999999999******************************95 PP

>> Asp1  Accessory Sec system protein Asp1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   1.9   4.5e-05      0.12     234     411 ..     121     300 ..     104     310 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 4.5e-05
        Asp1 234 aanplynqailellsknsqlilsvfsernnasnveelkadleradlvltdrldikkalkekldlqakkvvylspfdtrlqlGksqqrreskifyqidle 332
                  + ++++q +l    + +  i   f+er +  ++ e +a+++r + ++ dr +   ++ ++l+ +       s  +  lq  + q r+e++   +i+  
  EPX73900.1 121 EMTQMNKQQLLLESGEATPTIKQQFNERRKNAQIREREASIQREQQMIEDRKKRISEVTKNLQNRVDGWIEKSSTEEGLQGVREQYRKEVETL-RIESF 218
                 56788888888888888899*******************************999999999999999999999999999999999999999975.77766 PP

        Asp1 333 eklndkalfkvlkyvaknp..dieltigvyeaeqegiqkvedkvkelideyldakevvkkkfk.sddaenaldeneeeelrl 411
                   +  +a+  v++  a+n     +  ig + + ++ + k+     + ++  +dak  +++  k +++a++a +  e+ +l +
  EPX73900.1 219 GVEILQAMGDVYTQKARNTikSSKFGIGGFWSRMKEKGKIARDTWDTLSAAMDAKFSIDQMQKlESKADEATTPEERAKLEM 300
                 7777789999999999996224566676665555555555555666699999999999998885334444443334444444 PP

>> DUF4062  Domain of unknown function (DUF4062)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.3       1.3   3.2e+03       8      35 ..     108     141 ..     106     169 .. 0.68
   2 ?   10.6   0.0   0.00022      0.57       5      57 ..     193     245 ..     193     251 .. 0.94

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 1.3
     DUF4062   8 frdlkeeRealieallelglepvgmee......f 35 
                 +r++  e ea+ +++++++ +++++e+       
  EPX73900.1 108 VREMFREEEAMQDEMTQMNKQQLLLESgeatptI 141
                 6778888888888888888888777765443330 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00022
     DUF4062   5 SStfrdlkeeRealieallelglepvgmeefaardqsqlelcleevdecdifi 57 
                 SSt ++l+  Re+ ++++++l++e +g+e  +a  +   +   + ++++++ i
  EPX73900.1 193 SSTEEGLQGVREQYRKEVETLRIESFGVEILQAMGDVYTQKARNTIKSSKFGI 245
                 9*****************************99999999999*****9999766 PP

>> TBCA  Tubulin binding cofactor A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   7.7   4.5e-05      0.12       8      85 ..     108     196 ..     104     199 .. 0.76
   2 ?   -3.3   0.1       4.7   1.2e+04      29      34 ..     279     284 ..     263     297 .. 0.56

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 4.5e-05
        TBCA   8 vkRlvKEeasYekEleeqearleklka...........dgdedeydlkkqeevleetkamipdlkkrlekavekLeelleeeeeleete 85 
                 v  +++Ee+  + E+ + +++   l++           ++ + + ++++ e  ++  ++mi+d kkr+++  ++L++ ++   e+++te
  EPX73900.1 108 VREMFREEEAMQDEMTQMNKQQLLLESgeatptikqqfNERRKNAQIREREASIQREQQMIEDRKKRISEVTKNLQNRVDGWIEKSSTE 196
                 66678899999999887777766666655577777777444447888888***************************998773344554 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 4.7
        TBCA  29 leklka 34 
                 ++kl++
  EPX73900.1 279 MQKLES 284
                 222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (393 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1891  (0.105472); expected 358.6 (0.02)
Passed bias filter:                      530  (0.029561); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.38
# Mc/sec: 3081.24
//
Query:       EPX73901.1  [L=397]
Description: Swr1 complex subunit Swc3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (397 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       535  (0.0298399); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2826.84
//
Query:       EPX73902.1  [L=509]
Description: pig-S [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-93  313.7  11.1    1.7e-92  310.9  11.1    1.9  1  PIG-S       Phosphatidylinositol-glycan biosynthesis class S 
  ------ inclusion threshold ------
      0.016   15.1   0.2       0.42   10.5   0.0    2.5  2  DUF4576     Domain of unknown function (DUF4576)
      0.023   15.1   0.8      0.076   13.4   0.8    2.0  1  Syntaxin_2  Syntaxin-like protein
       0.12   12.2   0.7       0.48   10.2   0.3    2.2  2  RICTOR_M    Rapamycin-insensitive companion of mTOR, middle d
       0.55    9.9   4.2        1.6    8.4   0.1    2.6  3  DUF3507     Domain of unknown function (DUF3507)
       0.63   10.3   4.5        2.2    8.6   0.4    3.0  3  Mrpl_C      54S ribosomal protein L8 C-terminal domain


Domain annotation for each model (and alignments):
>> PIG-S  Phosphatidylinositol-glycan biosynthesis class S protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  310.9  11.1   5.8e-96   1.7e-92       4     508 ..      35     494 ..      32     498 .. 0.86

  Alignments for each domain:
  == domain 1  score: 310.9 bits;  conditional E-value: 5.8e-96
       PIG-S   4 lvvlllGlPlWwktTtiyRapLPleeiealadgkacrvtfp..levvvdasslpeeeaekllkevqqalddllekkefsletrwslrlklseseeqees 100
                  +++llG+P+WwktTt yRa++P+ e+e+   + +++++f   +++  d++        kl +   + ++++    +f +   ++l++++s++++    
  EPX73902.1  35 YLIFLLGIPIWWKTTTYYRASMPFYEMENARYKLESHLRFTptFRIENDPD-------GKLTDLSDKLINEEP---QFPF---YELQFTESKEAA---- 116
                 689*******************************99999997788875444.......467767788888888...7887...888888774444.... PP

       PIG-S 101 eseeeedgaltvrllpeedlstssaelskeskaldvvyppnsvssssdklsafvaeelvelfleeeeealisasksellsts....krttrsikyspty 195
                         ++++ + +++    +s++ + + ++l + y+ + +  s+++++  + + l e+f  e   + is + s+l s++      ++rsi+ sp+y
  EPX73902.1 117 --------DYSICISKSS----ESSS-YWKGRNLYLEYK-EDI--SEKEIAIMLVNRLYEVFSPE--IMDISGKYSQLTSKNvpskVYNKRSIQFSPQY 197
                 ........6788776666....2333.344444444543.333..67888888888888888888..55555555555555577644449********* PP

       PIG-S 196 hLsfsllnedpep..ssWdieaaleeylsplldaLspianftvetqvqyyaplslkpefeevaavvlskddLssfvnaaEwslsssi.sssptlnFvvy 291
                 ++ +sl+ ++++   + W+ie+a+ +yl pl+++Ls+i n+tve+qvqy+ +    p ++++ ++    +d + +vn  E  l+ +   ++ptl+Fv+y
  EPX73902.1 198 RILLSLILGEGSHdlYGWEIENAVAKYLHPLIQQLSQIMNLTVESQVQYFVDDP--PVTSKEGEYRTAFSDFPKVVNNLEKYLTINSnVREPTLHFVLY 294
                 ******9988888799************************************66..44455667777999*************9777799********* PP

       PIG-S 292 vPsksespllikdstgeqsktnsfliPqWGgvvilnppaeekksegsssaelseeelkevmevFssqLrsLLGlpseekleessspaslpllreweldt 390
                 vPs++ +pl ++d++ge+++tns l+PqWG+++i n ++++       s+ l+  ++++ + + s++L+ LLG+++      +ss +    l+ + +++
  EPX73902.1 295 VPSQEIQPLKLEDQNGEEVATNSMLLPQWGSIIITNTNNSS-------SNLLQDFDMRSQFRTISKDLLLLLGVDD------FSSFS----LNPVVMER 376
                 ************************************99987.......6789999*******************95......44442....34569*** PP

       PIG-S 391 lkrrrtlelllsassTLgSLarLveslpnivIpdeVaedVesalellesaldaleegrleealasareaealaerAFFdpsmlgqlYFPdEhkvAVYlP 489
                 ++r+r++e l  ++ TL  L++L++s++n+++p+e++  V++al++l+ a d l+e +l+++l+++ + ++ a +A F+ sm+  +YFPdE k+++Y P
  EPX73902.1 377 MLRQRIAESLVATTDTLLNLSKLIKSIENMAVPKEIQLYVKEALKSLDLAYDTLSERKLSKTLSYSTNSFEKAQKALFHSSMVTTVYFPDESKYGIYAP 475
                 ******************************************************999****************************************** PP

       PIG-S 490 LlgPvlvplllgllkelke 508
                 L++P+++plll++++++ +
  EPX73902.1 476 LFAPIMIPLLLSFIRMVSN 494
                 **************99876 PP

>> DUF4576  Domain of unknown function (DUF4576)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.1     0.072   2.2e+02      30      64 ..      81     117 ..      75     136 .. 0.71
   2 ?   10.5   0.0   0.00014      0.42      16      87 ..     235     312 ..     218     315 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.072
     DUF4576  30 ddkPddkPdd.sgk..npepdfPkflnilGteiienav 64 
                 +++Pd k  d s+k  n ep+fP f ++  te  e a 
  EPX73902.1  81 ENDPDGKLTDlSDKliNEEPQFP-FYELQFTESKEAAD 117
                 678998866547777799*****.66777777766664 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00014
     DUF4576  16 vliltcraddkpneddkPddkPddsgknpepdfPkflnil......Gteiienavdfilrsmsrsteflefedkkgeh 87 
                 ++ lt +++ + ++dd P    ++  + +  dfPk +n l       +++ e +++f+l   s++ + l++ed++ge+
  EPX73902.1 235 IMNLTVESQVQYFVDDPPVTSKEGEYRTAFSDFPKVVNNLekyltiNSNVREPTLHFVLYVPSQEIQPLKLEDQNGEE 312
                 4568999999**************************9976222222578888899********************997 PP

>> Syntaxin_2  Syntaxin-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.8   2.5e-05     0.076      30      92 ..     377     452 ..     332     456 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 2.5e-05
  Syntaxin_2  30 elreklhelieeinelikktnellkklsqldnsssds.............qqklqkekLkkdfkealqeFqkiqrq 92 
                  lr+++ e+   +++++ + ++l+k++++++  ++ +                l++ kL+k ++++ ++F+k+q+ 
  EPX73902.1 377 MLRQRIAESLVATTDTLLNLSKLIKSIENMAVPKEIQlyvkealksldlaYDTLSERKLSKTLSYSTNSFEKAQKA 452
                 5899**9**********************9999988899********9998999********************96 PP

>> RICTOR_M  Rapamycin-insensitive companion of mTOR, middle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       1.7   5.2e+03      71      90 ..     191     210 ..     169     212 .. 0.79
   2 ?   10.2   0.3   0.00016      0.48      38      91 ..     392     445 ..     385     453 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.7
    RICTOR_M  71 ysvdghiRiilskaLtnsse 90 
                  +++ + Ri+ls +L ++s 
  EPX73902.1 191 IQFSPQYRILLSLILGEGSH 210
                 56677899999999988775 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00016
    RICTOR_M  38 klLekwkiftllyklvelksrddllklilssldysvdghiRiilskaLtnssek 91 
                  lL+ +k+++ +++++  k+ + ++k  l+sld+ +d  +   lsk L  s+++
  EPX73902.1 392 TLLNLSKLIKSIENMAVPKEIQLYVKEALKSLDLAYDTLSERKLSKTLSYSTNS 445
                 5888999*****************************************988876 PP

>> DUF3507  Domain of unknown function (DUF3507)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.1   0.00052       1.6      82     132 ..     126     175 ..     120     180 .. 0.80
   2 ?   -3.1   0.0       1.8   5.3e+03     109     121 ..     271     283 ..     233     284 .. 0.72
   3 ?    2.0   0.4      0.05   1.5e+02      84     132 ..     396     444 ..     385     459 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00052
     DUF3507  82 sskSrfypaveNLspkyqksnvrkslAvalLkkYallsesklskikselsk 132
                 s++S ++    NL ++y+++   k +A++l ++   + + ++  i+++ s+
  EPX73902.1 126 SESSSYWKG-RNLYLEYKEDISEKEIAIMLVNRLYEVFSPEIMDISGKYSQ 175
                 567888876.8********************99666666667777776665 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 1.8
     DUF3507 109 valLkkYallses 121
                 v +L+kY +++++
  EPX73902.1 271 VNNLEKYLTINSN 283
                 7789999888875 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.05
     DUF3507  84 kSrfypaveNLs.pkyqksnvrkslAvalLkkYallsesklskikselsk 132
                  S+   ++eN+  pk  +  v+ +l  + L  Y +lse klsk  s  ++
  EPX73902.1 396 LSKLIKSIENMAvPKEIQLYVKEALKSLDLA-YDTLSERKLSKTLSYSTN 444
                 57888999**97478888899*********9.**********99887665 PP

>> Mrpl_C  54S ribosomal protein L8 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.2      0.47   1.4e+03      43      66 ..       7      31 ..       4      34 .. 0.74
   2 ?    1.2   0.0      0.15   4.5e+02      32      86 ..     171     226 ..     166     250 .. 0.75
   3 ?    8.6   0.4   0.00074       2.2      35      89 ..     389     443 ..     373     459 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.47
      Mrpl_C 43 kKmlkfkskeq.llkeilavrkflk 66
                kK++++k++++  + +   +rk+++
  EPX73902.1  7 KKVSQNKKEKKnCSDDDSKIRKYIL 31
                6777766554439999999999996 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.15
      Mrpl_C  32 kayaplTlqnLkKmlkfkskeqllkeilavrkflkeeqele.wdeeeekeavkall 86 
                  +y++lT +n+   + +k+  q++ + + + ++++ e + + +  e e+++ k+l 
  EPX73902.1 171 GKYSQLTSKNVPSKVYNKRSIQFSPQYRILLSLILGEGSHDlYGWEIENAVAKYLH 226
                 689*********9999*******999999999998887766555555555554444 PP

  == domain 3  score: 8.6 bits;  conditional E-value: 0.00074
      Mrpl_C  35 aplTlqnLkKmlkfkskeqllkeila.vrkflkeeqelewdeeeekeavkalldqv 89 
                 ++ Tl nL K++k  ++ ++ kei+  v++ l ++ +l++d  +e+++ k+l  + 
  EPX73902.1 389 TTDTLLNLSKLIKSIENMAVPKEIQLyVKEAL-KSLDLAYDTLSERKLSKTLSYST 443
                 567*********************86256555.567799**999999988887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (509 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       770  (0.0429472); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.52u 0.29s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 3634.70
//
Query:       EPX73903.1  [L=135]
Description: NADPH-hemoprotein reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.1e-19   68.5   0.0    5.6e-19   68.1   0.0    1.2  1  Cyt-b5    Cytochrome b5-like Heme/Steroid binding domain


Domain annotation for each model (and alignments):
>> Cyt-b5  Cytochrome b5-like Heme/Steroid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.1   0.0   3.1e-23   5.6e-19       2      73 ..      64     134 ..      63     135 .] 0.97

  Alignments for each domain:
  == domain 1  score: 68.1 bits;  conditional E-value: 3.1e-23
                 HHHHTTTECTTEEEEEETTEEEECTTTCCCSTTCSHHHHTTTTSBBHHHHHHTTGGCHHHHHHHHGGEEEEE CS
      Cyt-b5   2 leelskhngkndlwvairgkVYDvskflskhpGgesailkyaGkDateafksvvhsekdaekllkkylvGkl 73 
                 ++el+kh++++d+w++i+gkVY+v+ +l++hp g + i +  G Dat+ f    h + + e +l+++++G+l
  EPX73903.1  64 KDELKKHCTEEDCWMSIKGKVYNVTPYLNYHPAGVKKIINNSGIDATQVFMMN-HAWVNEEAILRNCFIGYL 134
                 78***************************************************.*****9**********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       326  (0.0181828); expected 358.6 (0.02)
Passed bias filter:                      268  (0.0149478); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.23s 00:00:00.57 Elapsed: 00:00:00.37
# Mc/sec: 1094.19
//
Query:       EPX73904.1  [L=310]
Description: cytidylyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    0.00059   20.0   1.4     0.0016   18.7   0.4    2.3  2  CTP_transf_like  Cytidylyltransferase-like
  ------ inclusion threshold ------
      0.059   12.7   0.0       0.11   11.9   0.0    1.5  1  SPOUT_MTase_2    AF2226-like SPOUT RNA Methylase fused to THU


Domain annotation for each model (and alignments):
>> CTP_transf_like  Cytidylyltransferase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.1   9.4e+03     136     141 ..     120     125 ..     105     148 .. 0.61
   2 !   18.7   0.4   1.7e-07    0.0016       2     142 ..     158     303 ..     157     304 .. 0.73

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.1
                      SHHHHH CS
  CTP_transf_like 136 Sstkir 141
                      Sst+++
       EPX73904.1 120 SSTEVI 125
                      344333 PP

  == domain 2  score: 18.7 bits;  conditional E-value: 1.7e-07
                      EEE--TT--HHHHHHHHHHHHHSSESEEEEEESSTHCSST.-.SCSSTHHHHHHHHHHHTTCTTEEEEEEESEHH....HHHHHTTTTEEEEEE CS
  CTP_transf_like   2 agGtFDpiHlGHlrlleqakklleedlivgvpsdeppkkk.k.kplasaeeRlemlelakevdevisvdpweltr....evlkklkpdklylvi 89 
                      +gGtFD +H GH  ll  a+  + e+++vgv  +e   +k +   l + e R   +  + ++ +    + +++ +     +++  ++d   l++
       EPX73904.1 158 VGGTFDHLHVGHKVLLTLAAWIGIEKVYVGVSGNELLLNKvErAYLENIEVRKNSVYDFLHSIKKNIQSNIVIIKdpfgPTITHGEID--SLLV 249
                      69********************999999999988888777557888888889888888866666566666666666888888888899..9999 PP

                      EHHHHHHHHCHHHHHHHHHHHHHEEEEEE.HTTCEEEEEEECCTTTCSHHHHHH CS
  CTP_transf_like  90 gadvledfsewkeleeilgnvklvvvsrp.ekqanvllkaekrtngiSstkire 142
                      ++++++ +++ +  ++  g  +l ++ ++  + a   ++++ ++ + Sst ir+
       EPX73904.1 250 SQETIKGADSIQTERRKRGLPELDIYCIDlLHFAHATMPENCDPVKLSSTAIRK 303
                      999999886655444444444444444443344444477777788889999987 PP

>> SPOUT_MTase_2  AF2226-like SPOUT RNA Methylase fused to THUMP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   1.2e-05      0.11      65     109 ..     197     241 ..     181     279 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 1.2e-05
  SPOUT_MTase_2  65 iqkksygrevrkvpvlvqdlyqlvrkrrkkellivtdPeGeeise 109
                      +++y  +++  + +v+d+ + ++k  + +++i+ dP G +i++
     EPX73904.1 197 KVERAYLENIEVRKNSVYDFLHSIKKNIQSNIVIIKDPFGPTITH 241
                    4578888888888899*************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       871  (0.0485805); expected 358.6 (0.02)
Passed bias filter:                      539  (0.030063); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.28s 00:00:00.78 Elapsed: 00:00:00.52
# Mc/sec: 1795.20
//
Query:       EPX73905.1  [L=389]
Description: phosphoserine aminotransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.2e-37  129.8   0.0    1.4e-37  129.6   0.0    1.0  1  Aminotran_5  Aminotransferase class-V


Domain annotation for each model (and alignments):
>> Aminotran_5  Aminotransferase class-V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.6   0.0   7.7e-42   1.4e-37       2     371 .]       8     376 ..       7     376 .. 0.86

  Alignments for each domain:
  == domain 1  score: 129.6 bits;  conditional E-value: 7.7e-42
                  EEBTTTS----HHHHHHHHHHHHCTCCSSSS..SSSHHHHHHHHHHHHHHHHHHHHHT-STGGGEEEESSHHH.HHHHHHHHCCCC...-TTTSEEE. CS
  Aminotran_5   2 yldsaAttqkpqeVldalqeyytdynanvhr..svhhlgkeatkaveearekvaelinaeseeeiiftsGtte.ainlvalslars...lkpgdeiv. 92 
                   ++ a+++    +V++++++ + ++++ +    +++h++ke t +v+ ++e ++++++ +++  i+f++G+++ ++++v++++ ++    +p  + + 
   EPX73905.1   8 INFAAGPAGMATDVVEEYAKDFVNFQNLGMGvgEISHRSKEGTGIVNRTEESLRRMYGLPDNFHILFMQGGGTeQFAAVLYNVYAHhalYNPNAKKLv 105
                  6899*******************9998877667************************************97666*******99777788454444440 PP

                  ..EETTSHGGGTHHHHHHHHHHTEEEEEE..EBETTSCBEGGGHHHH-....-TTEEEEEEESBETTTTE.B--HHHHHHHHHHTT-EEEEE-TTTTT CS
  Aminotran_5  93 ..vteaehhanlvpwqelakrtgakvkvi..pldeegeldldelekll....nektklvaithvsnvtGt.iqpveeigklakkkgalvlvDaaqavg 181
                    + +++ +++  + +e+ +r g+  +v+  +++ +g++ + + ++ l    + +t+lv+ + +++++G+ +++ ++ +     kga+ ++D ++++ 
   EPX73905.1 106 anYIVTGSWSKK-ALNEA-QRLGFPCHVAadTKELTGKYGCLPKDSDLnytpAGETSLVYWCDNETIHGVeFNEPPANI----PKGAIRVCDCSSNFI 197
                  126679*****9.55555.699998888844556667777555555553444689***************644444433....47************* PP

                  TS---HHHHTESEEEEETTTTTSSTT-EEEEEEHHHHHTS....SS.STTSEEEEETTEEEEHCTTGGGS.SS--HHHHHHHHHHHHHH.HCHHHHHH CS
  Aminotran_5 182 hipidvkklgvDflafsghKllgPtGiGvlyvrkellekl..eplllggemveevsleettfaeapskfeaGTpnvagiiglgaaleyl.eeigleai 276
                  +++id++k ++  l+++++K+ gP+Gi++++vr+++le++  + l+  g  v++   +++ +a++ s ++  T +++ + ++++ l+y+ +++gl   
   EPX73905.1 198 SRRIDFSKHDI--LFAGAQKNAGPAGITMVFVRDSILERAlvPDLHKMGIPVSTTMADYKLMADSNSLYN--TLPIPTLHAINLGLQYMeKKGGLPFL 291
                  ********999..*************************9988888888888999999*************..*****************99******* PP

                  HHHHHHHHHHHHHHHCTSTTEEEES.-B-CTCBSEEEEEETTCSHHHHHHHHHHT.TEEEEE..E-TTTHHHHHHTT.S-EEEEE--TTS-HHHHHHH CS
  Aminotran_5 277 ekhekelaeyllerlkslpgvrlygpdkaerrasivsfnfkgvhaedvatlLdee.gIavrs..GhhcaqplmkrlalegtvRaSlyiynteeevdrl 371
                  e+ + ++++++++ l+++p +++++       +s ++++f+  + +   ++L  + +  + +  Gh++           g+vR+Sly++ t e+ +rl
   EPX73905.1 292 EEASLKKSQMVYQVLDKYPIYENFVD---SYARSRMNVTFRINNQDLENKFLVGAeELNMMQlkGHRSI----------GGVRVSLYNAITIEQTERL 376
                  ***********************884...78899999999999999999998776677777777*****..........**************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (389 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       407  (0.0227007); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.22s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2901.52
//
Query:       EPX73906.1  [L=364]
Description: endocytosis regulator [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-36  125.6   0.6    2.8e-36  125.0   0.6    1.2  1  LDB19       Arrestin_N terminal like
    9.8e-06   25.7   0.1    1.6e-05   25.0   0.1    1.2  1  Arrestin_N  Arrestin (or S-antigen), N-terminal domain


Domain annotation for each model (and alignments):
>> LDB19  Arrestin_N terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.0   0.6   3.1e-40   2.8e-36       1     190 [.      62     235 ..      62     237 .. 0.93

  Alignments for each domain:
  == domain 1  score: 125.0 bits;  conditional E-value: 3.1e-40
       LDB19   1 lklklvkkvhvkkpfvadlsaiqtCsaCktkteelksWdlqkntkdlkvGsysyPfsylipGslpassslgsnaetkvkyeliavvvykdptprkgass 99 
                 ++lk+++ +++k+p      + ++C  C++ ++ ++sWd+ + ++ +  G++++Pfs+++pG +p +++   +  ++++y l avv+  d      +s+
  EPX73906.1  62 VNLKFMRIISTKHP------VRESCPKCRSTVDVFESWDFSSTSSSFAHGTHTWPFSFIVPGHFPQTTE---SPFVNIRYLLLAVVTS-D------TSA 144
                 679999********......899*********************************************9...999***********99.5......333 PP

       LDB19 100 skeellklamPikvkravlrgPdknslrvfPPtelvatavlPsvvyPksafplelkleGvsegd..rrWrlrkltWrieettrikshaCdkhk 190
                 + +   kl   + ++r+++   dk   r+fPPt lva   +P v++  s +p++++l+G   ++    Wrl k++Wriee+ + +  +C  h 
  EPX73906.1 145 NTN--AKLEHSLVIRRSIILNTDKVAQRLFPPTSLVALLEMPPVIHALSCIPVQFQLTGCRPQNtaFSWRLSKVSWRIEEQIKARISPCADHE 235
                 333..4788899************************************************98876789**********************996 PP

>> Arrestin_N  Arrestin (or S-antigen), N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.1   1.7e-09   1.6e-05      81     141 ..      96     157 ..      69     162 .. 0.82

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 1.7e-09
                 SHHHHHHHH-TTEEEEEE---TTS--SECSGEEEEEEEEEEEEECCCE--C..CCEEEEEEE CS
  Arrestin_N  81 kdsqekLpkGehafpFsfelPknlpsSfeGkaggvrYevkvtldrpwkidkk.kkkvftVir 141
                 +++++++  G+h++pFsf +P + p + e+ + ++rY + +++++ +  + + k +  +Vir
  EPX73906.1  96 SSTSSSFAHGTHTWPFSFIVPGHFPQTTESPFVNIRYLLLAVVTSDTSANTNaKLEHSLVIR 157
                 456688999**********************************9999666551445566665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (364 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       360  (0.0200792); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2725.71
//
Query:       EPX73907.1  [L=265]
Description: DNA repair endonuclease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.5e-56  191.2   0.0    1.9e-56  190.9   0.0    1.1  1  Endonuclease_5  Endonuclease V
  ------ inclusion threshold ------
       0.04   13.3   0.1      0.097   12.1   0.0    1.7  2  DUF99           Protein of unknown function DUF99


Domain annotation for each model (and alignments):
>> Endonuclease_5  Endonuclease V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  190.9   0.0   2.2e-60   1.9e-56       3     196 ..      32     248 ..      31     249 .. 0.86

  Alignments for each domain:
  == domain 1  score: 190.9 bits;  conditional E-value: 2.2e-60
                     HHCC-------SGG..-SEEEEEEEEEEECTCEEEEEEEEEEETTTTEEEEEEEEEE.E--S-SSTT-CHHHCHHHHHHHHCC-SS-..-SEEEE CS
  Endonuclease_5   3 lakkveledklkek..lklvaGvDvsfvkeekkeavaalvvldlpslevvekavavv.klsfpYipgfLaFRElpvllkaleklkqk..pdvllv 92 
                     l+++++ e+k++++  ++++aG+D+sf k++  +av+alv++d+++ +v+++++ ++ +l+ +Y+pgfL+FRE++ +l +le++ q+   d+++v
      EPX73907.1  32 LKQRLVYESKIQDVdsIRYIAGLDISFDKTSP-KAVSALVLYDFQDAQVIYRDYLEIdSLKEEYVPGFLSFREIEWYLPLLERIPQNysIDLIMV 125
                     67888889999888889**********77777.57*****************99877589**************************6558***** PP

                     EC-SSSSTTS--HHHHHHHHHTS-EEEEESS-SS.....SBE----SSTTEE............EEEEETTEEEEEEEESSTTS.--EEEEEECS CS
  Endonuclease_5  93 DGnGiaHprrlGlAshlGvlldlptiGvaKsllv.....gkveepekekgsv............vplvsegevigaalrtkknv.kpiyvSvGhr 169
                     DGnG++Hp ++GlA+hlGvl++lpt+GvaK++++     ++++e+ ++ +++              l + ++++gaa+ t++++ +piyvS+G++
      EPX73907.1 126 DGNGTLHPIQFGLACHLGVLINLPTMGVAKNYFHcfglnESLDEHRQRLSNHiltnpsrpplllHSLREPSTILGAAVWTRRESkRPIYVSIGNQ 220
                     **********************************7755423333333333336777777655555555669**********99989********* PP

                     S-HHHHHHHHHHCS-.T-SS-HHHHHHH CS
  Endonuclease_5 170 isletalelvlallk.kyrlPepirqAd 196
                     ++l+ a++lv +++  + ++PepirqAd
      EPX73907.1 221 LTLDIAIQLVFRTSGvDSKIPEPIRQAD 248
                     **************9889*********9 PP

>> DUF99  Protein of unknown function DUF99
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0      0.66   5.9e+03     107     125 ..      13      32 ..      10      57 .. 0.63
   2 ?   12.1   0.0   1.1e-05     0.097     150     181 ..     221     253 ..     193     255 .. 0.72

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 0.66
                 HHHHCCT.TSTTH.HHHHHH CS
       DUF99 107 klekaLrkhfpde.eeRlel 125
                 k++ +Lr++++ + ++ l l
  EPX73907.1  13 KINTHLREKVESWrKDQLLL 32 
                 56777777777774344433 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 1.1e-05
                 S-HHHHHHHH.HHC-SSSSS-HHHHHHHHHHHH CS
       DUF99 150 ieleeaaklv.rkltlegriPEPlRvAhliAsa 181
                 ++l+ a +lv r   ++++iPEP+R A++ A+ 
  EPX73907.1 221 LTLDIAIQLVfRTSGVDSKIPEPIRQADIFAKF 253
                 55666666661455689*************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (265 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       442  (0.0246528); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.37
# Mc/sec: 2166.85
//
Query:       EPX73908.1  [L=194]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-06   28.4   3.4    7.9e-05   22.2   0.2    2.5  2  PEX11     Peroxisomal biogenesis factor 11 (PEX11)


Domain annotation for each model (and alignments):
>> PEX11  Peroxisomal biogenesis factor 11 (PEX11)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.2   4.4e-09   7.9e-05      86     151 ..      71     138 ..       5     143 .. 0.90
   2 !    7.0   0.4    0.0002       3.6     182     222 ..     142     184 ..     138     185 .. 0.85

  Alignments for each domain:
  == domain 1  score: 22.2 bits;  conditional E-value: 4.4e-09
       PEX11  86 llavlrnlgyalYlllDhvlwlkklgllkvknak..klsrlssrfwlfglvlslvrdlyelrllqeke 151
                 l + l+n+  ++Y++ + + +l++ ++++ +++k  +ls +s r+wl+  +l++ + l ++r  ++k+
  EPX73908.1  71 LESHLSNAINMCYYITEGLAFLGSKQIISMSKSKedQLSLISCRCWLLDTLLTIYQLLKKVRNTHDKQ 138
                 556789***********************9999999********************999999988886 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0002
       PEX11 182 dlvknllDllialnel..gilklsdgvvGlaGliSSllgllql 222
                 dl  n++ l ++l++   + l ls++ +G++Gl+S+++++++l
  EPX73908.1 142 DLAANVVSLPLCLHWStgSGLGLSKQQIGALGLFSTVVQVRKL 184
                 6777888888888888877889****************99886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       477  (0.0266049); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.37
# Mc/sec: 1575.37
//
Query:       EPX73909.1  [L=168]
Description: translationally controlled tumor protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-71  240.4   3.0    1.3e-71  240.3   3.0    1.0  1  TCTP      Translationally controlled tumour protein


Domain annotation for each model (and alignments):
>> TCTP  Translationally controlled tumour protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  240.3   3.0   7.4e-76   1.3e-71       1     165 [.       1     163 [.       1     164 [. 0.98

  Alignments for each domain:
  == domain 1  score: 240.3 bits;  conditional E-value: 7.4e-76
                 -EEEEETTTTTTSEECTT-EEEE.TTTEEEEE--EEEEETT.BST.TSSS--SSSSSSS.SCCCECCEEHHHHCCTEEEECCHHHHHHHHHHHHHHHHH CS
        TCTP   1 MiiYkdiitgdElfSDsykikevkdgvvyevegkmvtkkeg.nvdliganasaeegeeegvddevekvndivdnfrLqetsfdkksykaylkdYmkkvk 98 
                 M+++kd+i+gdEl+SD+y++kev d++vye++++mvt k+g +vd igan+sae+g + ++++++e+vn++v +frL+ tsfdkksy++y+k+Ymk++k
  EPX73909.1   1 MLLFKDVISGDELVSDAYDLKEV-DDIVYEADCQMVTIKQGgDVD-IGANPSAEDGGD-VTEEGTETVNNLVYSFRLNPTSFDKKSYMTYIKGYMKTIK 96 
                 99*********************.99***********99999***.9*******8886.57************************************** PP

                 HHHHHCSCCHHHHHHHHHHHHHHHHCTCCTTCEEEEECCCCTTS-EEEEEEECCCCEEEEEEECCCE CS
        TCTP  99 kkleekkpeevkeFkkgaqeavkkilanfkdyqfytgesmdpdgmvvlldyredgvtPyfvffkdGL 165
                  +l+ek+pe+v  F+k+a e+vkkil+nf+dy+f++gesmdpd+mvvl++yredg+tPy++ffkdGL
  EPX73909.1  97 GRLQEKNPERVPIFEKKAVEYVKKILGNFNDYDFFIGESMDPDAMVVLMNYREDGMTPYMTFFKDGL 163
                 ******************************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       646  (0.036031); expected 358.6 (0.02)
Passed bias filter:                      512  (0.0285571); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1306.17
//
Query:       EPX73910.1  [L=318]
Description: protein kinase activator [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-18   66.3   2.5    1.8e-07   31.5   0.1    4.3  4  CBS       CBS domain


Domain annotation for each model (and alignments):
>> CBS  CBS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.8   0.0    0.0046        82      32      56 ..      57      82 ..      30      83 .. 0.76
   2 !   12.4   0.0   9.2e-06      0.16      10      56 ..     120     171 ..     108     172 .. 0.83
   3 !   16.0   0.0   6.9e-07     0.012      14      43 ..     200     229 ..     191     243 .. 0.82
   4 !   31.5   0.1     1e-11   1.8e-07       9      56 ..     267     314 ..     253     315 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.0046
                EEEEEETTT.BEEEEEEHHHHHHHHH CS
         CBS 32 rlPVVdedg.klvGivtlrDllrall 56
                + P  d++  ++ G++t+ D +++++
  EPX73910.1 57 SAPLWDSEAnRFAGLLTMADFVNVIK 82
                66777555549*********999886 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 9.2e-06
                 EEEETTSBHHHHHHHHHHHTSSEEEEEETTTB.....EEEEEEHHHHHHHHH CS
         CBS  10 vtvppdttleealelmrekgvsrlPVVdedgk.....lvGivtlrDllrall 56 
                 + v+p  +l ea   m +++ +r+P +d dg+     +v ++t+  +l++++
  EPX73910.1 120 LHVHPMHSLMEACLAMSKSRARRVPLIDVDGEtgsemIVSVLTQYRILKFIS 171
                 5899999*********888899***88666655567799**********996 PP

  == domain 3  score: 16.0 bits;  conditional E-value: 6.9e-07
                 TTSBHHHHHHHHHHHTSSEEEEEETTTBEE CS
         CBS  14 pdttleealelmrekgvsrlPVVdedgklv 43 
                  ++ +  ++++++ek++s++P+V+++g l+
  EPX73910.1 200 MNMKVFAVIQILAEKAISAVPIVNDEGILI 229
                 578999******99*************877 PP

  == domain 4  score: 31.5 bits;  conditional E-value: 1e-11
                 CEEEETTSBHHHHHHHHHHHTSSEEEEEETTTBEEEEEEHHHHHHHHH CS
         CBS   9 vvtvppdttleealelmrekgvsrlPVVdedgklvGivtlrDllrall 56 
                 v+t++ ++ l  +++ +++++v+rl+VV ed +l Gi++l+D+l++++
  EPX73910.1 267 VHTCRDTDHLDGIFDAIKHSRVHRLFVVSEDFHLKGILSLSDILNYIV 314
                 579999999999*****7777*******88889*************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (318 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       423  (0.0235931); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.21s 00:00:00.64 Elapsed: 00:00:00.36
# Mc/sec: 2625.48
//
Query:       EPX73911.1  [L=257]
Description: phosphomannomutase Pmm1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   5.3e-112  373.0   1.7   6.1e-112  372.8   1.7    1.0  1  PMM          Eukaryotic phosphomannomutase
     0.0002   21.2   0.0     0.0012   18.6   0.0    2.0  1  Hydrolase_3  haloacid dehalogenase-like hydrolase
  ------ inclusion threshold ------
       0.15   12.3   0.0       0.21   11.8   0.0    1.4  1  Hydrolase    haloacid dehalogenase-like hydrolase
       0.15   12.1   0.4       0.43   10.6   0.0    2.0  3  DUF600       Protein of unknown function, DUF600


Domain annotation for each model (and alignments):
>> PMM  Eukaryotic phosphomannomutase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  372.8   1.7  1.4e-115  6.1e-112       1     219 [.      35     255 ..      35     257 .] 0.99

  Alignments for each domain:
  == domain 1  score: 372.8 bits;  conditional E-value: 1.4e-115
                 HHHHHHHHCTTSEEEEE-SS-HHHHHHHHS...TTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHH-HHHHHHHHHHHHHHHHCS--S---S-SEEEE CS
         PMM   1 lkeflqklrkkveigvvgGsdlekikeqla..gdevldefdyvfsenGlvaykkgkelasqsiiealgeeklkklinfvlryladldlPvkrGtfiefr 97 
                 + + lqklr+ v++g+vgGsdl+k++eql+  g++v+++fdy f+enGl+ay+ g++lasqs+i+++ge+k++kl+nf+l+y+adld+PvkrGtf+efr
  EPX73911.1  35 MLDCLQKLRQIVAVGFVGGSDLNKQQEQLSvsGENVVNSFDYSFAENGLTAYRYGEQLASQSFIQYIGEDKYQKLVNFCLHYIADLDIPVKRGTFVEFR 133
                 5789*************************999******************************************************************* PP

                 SSEEEE-SS-TTSSHHHHHHHHHHHHHHTHHHHHHHHHHHHTTTSSEEEEEETTTEEEEEETT-SGGGGGGGCTTST-SEEEEEESS-STTSTTHHHHH CS
         PMM  98 ngllnvsPiGrnasqeernefeeydkkekireklvealkeefadlgltfsiGGqisfdvfPkgWdktyclqhvekdsfdeihffGdktaeGGndyeiya 196
                 ng++n+sPiGrnas++er+efe++dk ++ir ++v+al+e+f d+gltfsiGGqisfdvfP+gWdktyclqhv+k++f++ihffGdkt +GGndyeiy+
  EPX73911.1 134 NGMVNISPIGRNASNKERQEFEQFDKIHNIRLNMVNALREKFGDYGLTFSIGGQISFDVFPTGWDKTYCLQHVQKEGFETIHFFGDKTFTGGNDYEIYE 232
                 *************************************************************************************************** PP

                 STTCEEEE-SSHHHHHHHHHHHH CS
         PMM 197 dprtighsvtspddtvkkleell 219
                 dprtigh+vt p+dt+++l+el+
  EPX73911.1 233 DPRTIGHTVTCPEDTMQQLRELF 255
                 *********************98 PP

>> Hydrolase_3  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0   2.8e-07    0.0012       1     198 [.      16     209 ..      16     230 .. 0.68

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 2.8e-07
                  EEEEIIIIIS-TTS---HHHHHHHHHHHHTTSEEEEE-SS-HHHHHHHHHHCCCC.....SEEEEGGGTEEECTTTEEEEE--B-...HHHHHHHHHH CS
  Hydrolase_3   1 ialDlDGTLlnsdkkisektkeaikklkekgikvviATGRslravlpvleelgld.....lpvialNGaliddekgkilykstis...kedvkeiikl 90 
                  + +D+DGTL  s  +is++  + ++kl+ + + v +  G  l + ++ l   g +      +  a NG   + + +++ ++s i+   ++++++++++
   EPX73911.1  16 VLFDVDGTLTPSRLSISPEMLDCLQKLR-QIVAVGFVGGSDLNKQQEQLSVSGENvvnsfDYSFAENGLTAYRYGEQLASQSFIQyigEDKYQKLVNF 112
                  579*************************.9999******88777777766555445567889999***999666666666655555557777777777 PP

                  HHHTTCEEEEEESSEEEESTT.THHHHHHHHHCHCTCEEEESHHHHHCHCSESEEEEES-HHHHHHHHHHHHHHCTTTE.EEEEESTTEEEEEETT-S CS
  Hydrolase_3  91 lkennveillytedkvyvlnkeksekkkkeeektkkkkeeidseeeledeeiakililkdkekldelekelksklnkll.titssskgyleimpkgvs 187
                  + ++  ++ +  +++++v+            +   + +++ ++ +++e++e+ ++  +k ++   ++ ++l++k+++   t++  ++ ++++ p g++
   EPX73911.1 113 CLHYIADLDIPVKRGTFVEFR----------NGMVNISPIGRNASNKERQEFEQF--DKIHNIRLNMVNALREKFGDYGlTFSIGGQISFDVFPTGWD 198
                  777666666666666666555..........444444444444444444444444..33334444555555555555434888889999999999999 PP

                  HHHHHHHHHHH CS
  Hydrolase_3 188 Kgtalkklake 198
                  K   l++++ke
   EPX73911.1 199 KTYCLQHVQKE 209
                  99999998864 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   4.7e-05      0.21       3      53 ..      15      63 ..      13     153 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 4.7e-05
                EEEEESBTTTBCHH....HHHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHH CS
                xxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  3 tvvfDkdGTLttge....psvedvivsaalalaaaletgsehpigkalvaaakar 53
                +v+fD+dGTLt ++    p+  d+++++ +++ a+ ++g     g  l ++ +++
  EPX73911.1 15 LVLFDVDGTLTPSRlsisPEMLDCLQKL-RQIVAVGFVG-----GSDLNKQQEQL 63
                79*********88877778888888888.4444444444.....33333444444 PP

>> DUF600  Protein of unknown function, DUF600
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       1.7   7.5e+03      60      74 ..     101     115 ..      73     122 .. 0.64
   2 ?   -2.5   0.1       1.1   4.9e+03      63      85 ..     155     177 ..     148     180 .. 0.74
   3 ?   10.6   0.0   9.6e-05      0.43      13      45 ..     190     222 ..     183     252 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.7
                 S-HHHHHHHHHHHHH CS
      DUF600  60 vseeeykkllkeLye 74 
                 + e++y+kl++   +
  EPX73911.1 101 IGEDKYQKLVNFCLH 115
                 456666666665555 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.1
                 HHHHHHHHHHHHHHHHHHHHHHH CS
      DUF600  63 eeykkllkeLyelikeLreefkk 85 
                 e+++k+ +   ++++ Lre+f +
  EPX73911.1 155 EQFDKIHNIRLNMVNALREKFGD 177
                 56777777777888888888865 PP

  == domain 3  score: 10.6 bits;  conditional E-value: 9.6e-05
                 HHH--S-EEEEEEEEEE-TT--EEEEEEEEETT CS
      DUF600  13 ldmiPeeWekvylyaevledsgevyFyylkkes 45 
                 +d+ P+ W+k y + +v++++ e++ ++  k  
  EPX73911.1 190 FDVFPTGWDKTYCLQHVQKEGFETIHFFGDKTF 222
                 6899*********************99988766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       547  (0.0305092); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.45
# Mc/sec: 1728.94
//
Query:       EPX73912.1  [L=810]
Description: hypothetical protein SOCG_03130 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (810 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3977  (0.221819); expected 358.6 (0.02)
Passed bias filter:                      457  (0.0254894); expected 358.6 (0.02)
Passed Vit filter:                       131  (0.0073066); expected 17.9 (0.001)
Passed Fwd filter:                        31  (0.00172904); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.53u 0.35s 00:00:01.88 Elapsed: 00:00:00.59
# Mc/sec: 4104.34
//
Query:       EPX73913.1  [L=108]
Description: CGR1 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.5e-26   92.8  28.3    1.7e-26   92.7  28.3    1.0  1  Cgr1           Cgr1 family


Domain annotation for each model (and alignments):
>> Cgr1  Cgr1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.7  28.3   9.5e-31   1.7e-26       5     108 .]       6     107 ..       2     107 .. 0.96

  Alignments for each domain:
  == domain 1  score: 92.7 bits;  conditional E-value: 9.5e-31
        Cgr1   5 rvsGksWkteKkafrsksskkkkkkkkswekrqekrkkakaiKklekeLkdekeaerqrrieaikerrkakeEkeRleelaakmhakkveRlkrrekRn 103
                  vsGk+Wk++K+a+r++      ++k+s+ekr+e+r++ ++ K++e++L+deke+er ++ ++i++rr+ak+EkeR+e l++k h+k ++R++rrekRn
  EPX73913.1   6 VVSGKPWKASKAAYRRSGLAP--TQKTSYEKRMEERRRVQEAKDREQKLRDEKEEERSAHAQKIRARREAKAEKERMELLQSKFHQKVIDRRRRREKRN 102
                 69************9999955..579************************************************************************* PP

        Cgr1 104 kklke 108
                 k+lke
  EPX73913.1 103 KMLKE 107
                 ***96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2516  (0.140331); expected 358.6 (0.02)
Passed bias filter:                      539  (0.030063); expected 358.6 (0.02)
Passed Vit filter:                        78  (0.00435049); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.27s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 824.76
//
Query:       EPX73914.1  [L=133]
Description: cytidine deaminase Ccd1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.3e-16   58.1   0.1    7.7e-16   57.8   0.1    1.1  1  dCMP_cyt_deam_1  Cytidine and deoxycytidylate deaminase zinc-
    3.9e-08   33.6   1.2    2.5e-05   24.5   0.2    2.1  2  dCMP_cyt_deam_2  Cytidine and deoxycytidylate deaminase zinc-
     0.0067   16.1   0.5       0.25   11.0   0.1    2.0  2  LmjF365940-deam  A distinct subfamily of CDD/CDA-like deamina


Domain annotation for each model (and alignments):
>> dCMP_cyt_deam_1  Cytidine and deoxycytidylate deaminase zinc-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.8   0.1   1.3e-19   7.7e-16       5      93 ..       7     100 ..       3     107 .. 0.87

  Alignments for each domain:
  == domain 1  score: 57.8 bits;  conditional E-value: 1.3e-19
                      HHHHHHHHHHHHHHH.TTTSCSEEEEEEE.TTEEEEEEESBHHCCTGTTB-HHHHHHHHHHHHTSSCETTEEEEE.....EE--BHHHHHHHHH CS
  dCMP_cyt_deam_1   5 ekllelalkaakeaq.kcsnfkVGavivk.ngeiistgyngepaggsktiHAEvnAilkaaknggsklegatlyv.....tlePCsmCakaiiq 91 
                      ++l+e +++  ++++ ++s+f VGa+++  +g+ +++g+n e+a++   ++AE++Ai+ka+++g+ ++    l v      ++PC+ C++ai +
       EPX73914.1   7 KQLFEHVKLSLNYSYcPYSKFAVGACVLCdDGKTFVYGANVENASYGAGVCAERVAITKAVSMGKKSF--MALGVmsdkgRVTPCGICRQAIRE 98 
                      6778888899999999**********9999*******************************9975565..3333377999************99 PP

                      HT CS
  dCMP_cyt_deam_1  92 sg 93 
                      + 
       EPX73914.1  99 FS 100
                      86 PP

>> dCMP_cyt_deam_2  Cytidine and deoxycytidylate deaminase zinc-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   0.2   4.2e-09   2.5e-05      48     109 ..      10      72 ..       1      80 [. 0.81
   2 !    8.3   0.0   0.00041       2.4       2      15 ..     120     133 .]     119     133 .] 0.89

  Alignments for each domain:
  == domain 1  score: 24.5 bits;  conditional E-value: 4.2e-09
                      HHHHHHHHTT-B-TTT---EEEEEEETTS-EE.EEE-B--TTSTT-B-HHHHHHHHHHHTT-- CS
  dCMP_cyt_deam_2  48 keaAlaaanasyapyskcpsGvaLvtkdgkvy.aGsyiEsaAfNpsLpPlqaAlvalvlggke 109
                       e+     n sy+pysk   G  + ++dgk++  G  +E+a +     + ++A+ ++v  gk+
       EPX73914.1  10 FEHVKLSLNYSYCPYSKFAVGACVLCDDGKTFvYGANVENASYGAGVCAERVAITKAVSMGKK 72 
                      5555567899*******99999888888876537**********************9985543 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00041
                      HHHSTT--SGGGGT CS
  dCMP_cyt_deam_2   2 sslLPhsFgPkdLl 15 
                      ++lLP+sFgP+dL+
       EPX73914.1 120 AELLPDSFGPEDLE 133
                      589*********96 PP

>> LmjF365940-deam  A distinct subfamily of CDD/CDA-like deaminases
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.1   4.1e-05      0.25      54     104 ..      35      81 ..      27      83 .. 0.80
   2 !    3.7   0.1    0.0071        42     154     173 ..      86     102 ..      79     117 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 4.1e-05
  LmjF365940-deam  54 gdgreelvrgvNlEvSmPtGSlCsErnaigkalasdpslrRrdlkaiAvls 104
                      +d  +++v g N+E        C+Er ai ka+    s+ ++ ++a+ v+s
       EPX73914.1  35 CDDGKTFVYGANVENASYGAGVCAERVAITKAV----SMGKKSFMALGVMS 81 
                      677788999*****98888889*********65....56677777777765 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.0071
  LmjF365940-deam 154 LkPCGaCeewLkkiaevnpd 173
                      ++PCG+C++ ++   e   d
       EPX73914.1  86 VTPCGICRQAIR---EFSKD 102
                      58*****98755...44444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       393  (0.0219198); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.46
# Mc/sec: 869.92
//
Query:       EPX73915.1  [L=303]
Description: serine/threonine protein phosphatase Azr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.5e-10   39.8   0.0    5.9e-10   39.4   0.0    1.2  1  SpoIIE    Stage II sporulation protein E (SpoIIE)
    5.5e-08   32.8   0.0    0.00065   19.4   0.0    2.2  2  PP2C      Protein phosphatase 2C
    0.00068   19.3   0.0     0.0037   16.9   0.0    2.1  1  PP2C_2    Protein phosphatase 2C


Domain annotation for each model (and alignments):
>> SpoIIE  Stage II sporulation protein E (SpoIIE)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.4   0.0   9.9e-14   5.9e-10      38     187 ..     110     293 ..      70     299 .. 0.72

  Alignments for each domain:
  == domain 1  score: 39.4 bits;  conditional E-value: 9.9e-14
                 TSHHHHHHHHHHHCHCTTSTT.TTCEEEEEEEETTTTEEEEEEESSSSEEEEETTS....TEEEEE--SS--..TTTSSS..........T-EEEEEEE CS
      SpoIIE  38 lepaevlkrlnralardleeeerfaTavlavydpstgkleyanaGhpppllvrpdg....gtklllastglp..lGilpe..........adyetaele 120
                  +p  +l+++ + l+++   ++   T++  +++ ++gkl+ +n+G++  l++r+ g    +   +  ++++p  l i p              + ++ +
  EPX73915.1 110 PDPLSLLTNAFSSLKKSNSVKAGSSTVCTTIFEKQSGKLHSLNLGDSGFLILRK-GavfyESPPQVLQFNMPyqLAIYPSpyvskneitpYMSDLTKHQ 207
                 348888999999998888888999******************************.3355555555555666699999998********8777788999* PP

                 --TTEEEEEESCCCCSSSHHHHHHCCCHHCH..HHHCT......HCCHHHHHHHHHHH.................HTTSSSSS-EEE CS
      SpoIIE 121 lepgdtlllyTDGvtEardsdgelfgkerll..allasaeges.leelldalveelle.................lgsgeleDDitl 187
                 l++gd+++l+TDGv+++ ds+  l   +r+l    ++   +++ ++ ++d+ v + ++                 + +g++ DD+t+
  EPX73915.1 208 LHNGDLVILATDGVFDNLDSRSVLEIANRALseTSIDGDFTKRlADSICDTAVTNSKNtkwispfakaarnyglkF-RGGKVDDTTV 293
                 ******************8888873333333433333333222355555555555555777777777777766642.3466677766 PP

>> PP2C  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.3   0.0   3.2e-05      0.19      32     131 ..      65     165 ..      46     172 .. 0.66
   2 !   19.4   0.0   1.1e-07   0.00065     195     256 ..     202     262 ..     182     264 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 3.2e-05
                 CCCEEEEEEEEESSSHHHHHHHHHHH..HHHHHHHHCHTTH.....HHHHHHHHHHHHHHHHHHHHHHHHCHCCT-EEEEEEEEEETTE...EEEEEES CS
        PP2C  32 ssvsffavfdghggseaakyarehle..eilksqksfeele.....kleqalrksfladtdeelksskantepsksGstavvalirgtk...lyvAnvG 120
                  + +f av dg+gg     ++ ++     + ++ k+f+ ++     ++   l ++f +     lk+   n    k Gs  v++ i++++   l+  n+G
  EPX73915.1  65 AKYAFNAVLDGVGGWTSIGIDPSKFSwgLVRELEKEFKHFDndkfpDPLSLLTNAFSS-----LKK--SN--SVKAGSSTVCTTIFEKQsgkLHSLNLG 154
                 5556667777777766666666665544344455555555322233333333333333.....222..23..58999*99**9999999999******* PP

                 S-EEEEEETTE CS
        PP2C 121 DSravLcrkgn 131
                 DS  ++ rkg 
  EPX73915.1 155 DSGFLILRKGA 165
                 ******99985 PP

  == domain 2  score: 19.4 bits;  conditional E-value: 1.1e-07
                 EEEEEEE-TTEEEEEEE-HHHHTTSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCCHHC CS
        PP2C 195 dvtsvklteedefliLacdGlwdvlsdqeavdlvrdelekkkspeevaeelvdeaiargsed 256
                 d+t+++l +  + +iLa+dG++d l+++ + +++++ l++++ + ++ ++l+d +++ ++++
  EPX73915.1 202 DLTKHQLHNG-DLVILATDGVFDNLDSRSVLEIANRALSETSIDGDFTKRLADSICDTAVTN 262
                 4556666665.589***************************999999999999998888776 PP

>> PP2C_2  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   6.2e-07    0.0037      14     185 ..      57     231 ..      53     255 .. 0.62

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 6.2e-07
      PP2C_2  14 DalavwtdsggsllaVaDGaGSakrSerG......ariaveavvealaelleseeeeeeallraleaailadvlkeeaeaqdaelkdyatTllaavvtp 106
                 D++ + +d++ ++ aV DG+G      +G      +  +v+ + + ++++ +++ ++    l+ l++a+          ++ +++k+ ++T+  +++ +
  EPX73915.1  57 DSFTSLKDAKYAFNAVLDGVGGWTS--IGidpskfSWGLVRELEKEFKHFDNDKFPD---PLSLLTNAFS-------SLKKSNSVKAGSSTVCTTIFEK 143
                 5555444444444466666665332..222222225555555555555444444444...2232333333.......455789*************775 PP

      PP2C_2 107 ..deivalqiGDGaivvrdrdgevqllgepds..geyanqttfltsedaeeel......rirrlkledgdalllmTDGlanslrdeerf 185
                   +++ +l++GD++  ++ r+g+v+  + p++       q +  +s+ + ++        +++ +l++gd ++l+TDG+ ++l +++ +
  EPX73915.1 144 qsGKLHSLNLGDSGF-LILRKGAVFYESPPQVlqFNMPYQLAIYPSPYVSKNEitpymsDLTKHQLHNGDLVILATDGVFDNLDSRSVL 231
                 4488***********.578999998877777733444556666666655554455555778888899*************999655443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (303 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       406  (0.0226449); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2118.36
//
Query:       EPX73916.1  [L=641]
Description: succinate dehydrogenase Sdh1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   1.1e-125  420.0   2.9   1.3e-125  419.7   2.9    1.1  1  FAD_binding_2   FAD binding domain
    1.5e-44  151.1   0.5    2.2e-44  150.5   0.5    1.3  1  Succ_DH_flav_C  Fumarate reductase flavoprotein C-term
      1e-05   24.8   1.0       0.04   13.0   1.8    2.3  2  GIDA            Glucose inhibited division protein A
    1.1e-05   24.8   0.8      0.059   12.6   0.1    3.6  4  Thi4            Thi4 family
    8.9e-05   21.9   0.2     0.0056   15.9   0.1    2.6  3  Pyr_redox_2     Pyridine nucleotide-disulphide oxidoreductase
  ------ inclusion threshold ------
      0.014   14.7   0.2      0.024   13.9   0.2    1.4  1  FAD_binding_3   FAD binding domain
       0.17   10.9   0.0        0.3   10.1   0.0    1.4  1  Lycopene_cycl   Lycopene cyclase protein
        0.9    8.2   2.6        1.3    7.6   0.3    2.3  3  HI0933_like     HI0933-like protein


Domain annotation for each model (and alignments):
>> FAD_binding_2  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  419.7   2.9    6e-129  1.3e-125       1     417 []      56     451 ..      56     451 .. 0.98

  Alignments for each domain:
  == domain 1  score: 419.7 bits;  conditional E-value: 6e-129
                    SEEEE--SHHHHHHHHHHHHTTT-EEEEESSSGGGSGGGG--S-EE-TT..SSGGSTC.CHHHHHHHHHHHHTTT-S-HHHHHHHHHTHHHHHHHH CS
  FAD_binding_2   1 DviViGsGlAGLaAAleaaeaGlkvavvekeqefggatawsqGgidavlspeqkkagikdspelhrtdtlkaldeladqplveafveaapeavdeL 96 
                    D+iV+G+G+AGL+A+  +aeaG k+a+++k ++++++t+++qGgi+a+l +++    +kd++++h++dt+k++d+l+dq+++++++++ap+av eL
     EPX73916.1  56 DAIVVGAGGAGLRATFGLAEAGFKTACITKLFPTRSHTVAAQGGINAAL-GNM----TKDDWRWHFYDTVKGSDWLGDQDAIHYMTKEAPAAVLEL 146
                    89***********************************************.888....6799*********************************** PP

                    HHTT----BCCTSSB-EEE-TT-SST.......EEEE-.STT-......HHHHHHHHHHHHHHTCTEEEEESEEEEEEEECTTEEEEEEEEETTTT CS
  FAD_binding_2  97 eelgvpfsrtedgpvdvrelGglsat.......artlhdaadarretlvtghallarlvesarkagvdfqerteadeLivedgrvtGavvenpesg 185
                    e++gvpfsrt++g++++r +Gg+s +        r+++ +ad+      tgh ll++l+ + +++++ f+ +++a +L++e+g+++G++++n+e+g
     EPX73916.1 147 EHFGVPFSRTKEGKIYQRAFGGQSLEygkggqaYRCAA-VADR------TGHSLLHTLYGQSLRHNTNFFIEYFAMDLLMENGECRGVIAMNLEDG 235
                    ********************************877777.***9......*********************************************** PP

                    CEEEEEESEEEE-----GG..........GSSSBSSGTT-S-HHHHHHHCTTSSEES..TT-EEEEEEEET....TTTBB--THHHHTT-EEE-TT CS
  FAD_binding_2 186 revrirakavvlatgGfgrallkellgaaaeaettnapavtGdglalalragaalnddrmeevqfhPtslvpirdgsgiLitealrgeGgilvdkd 281
                    +++r+ra+++vlatgG+gr           ++++t+a+++tGdg+a++ rag++l+d  +e+vqfhPt+++    g+g+Lite+ rgeGg+l++++
     EPX73916.1 236 TIHRFRAHKTVLATGGYGR----------SYFSCTSAHTCTGDGNAMVSRAGLPLQD--LEFVQFHPTGIY----GAGCLITEGSRGEGGFLLNNK 315
                    *******************..........****************************..************....********************* PP

                    SSBTH.......GGGS-HHHHHHHHH.HHHHTTTS....CCBEEEE-TT.SSHHHHHHHSHHHHHHHHHCCT......S-TTTSEEE.......EE CS
  FAD_binding_2 282 GrrFm.......nelasrdvvsrailekeiaeggs....eanvyldashgldaegleatleaineeaangldkdfgrgidpadrpipgpfyavkvv 366
                    G+rFm       ++lasrdvvsr+++  ei+eg++    ++++yl +sh l+ae l+++l++i e+aa +++      +d +++pip       v 
     EPX73916.1 316 GERFMeryaptaKDLASRDVVSRSMT-LEIREGRGvgpeNDHIYLQLSH-LPAEVLKERLPGISETAAIFAG------VDVTKEPIP-------VL 396
                    **************************.************9*********.**********************......*********.......** PP

                    EEEEEES-EEEBETTSBE....STTEEESSBTEEE-STCEESSSSTTS--TTHHH CS
  FAD_binding_2 367 paqhytmgGvetdengrv....ldadgqpipGLYAaGevaaggvhganrlgGnsl 417
                    p++hy+mgG++t ++g+v     + ++q++pGLYAaGe+a+++vhg nrlg+nsl
     EPX73916.1 397 PTVHYNMGGIPTRYTGEVltidENGNDQVVPGLYAAGEAACVSVHGGNRLGANSL 451
                    ******************999889999**************************98 PP

>> Succ_DH_flav_C  Fumarate reductase flavoprotein C-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.5   0.5   9.9e-48   2.2e-44       1     128 []     506     641 .]     506     641 .] 0.97

  Alignments for each domain:
  == domain 1  score: 150.5 bits;  conditional E-value: 9.9e-48
                     .HHHHHHHHHHSSSSB-HHHHHHHHHHHHHHHHHHTTB--S---SSS-HHHHHHHHHHHHHHHHHHHHHHHHH--S-BTTBEBTTS-SEETTT-S CS
  Succ_DH_flav_C   1 rkeLgkimqkkvgvfRteegLkealkelkelrerlknvkvtdkskvaNqelvealelanllelAeaiaksAlaRkESrGaHaredfperdDenwl 95 
                     r +++k mq++v+vfRtee+L+e++++++++  ++++++++d++ ++N++l+ealel+nll++A ++a+sAl+RkESrGaHared+perdD+nw+
      EPX73916.1 506 RLNMQKSMQRDVSVFRTEETLQEGVNNIQKVDGSYSEIGIKDRGLIWNTDLIEALELRNLLTCAVQTAHSALNRKESRGAHAREDYPERDDANWI 600
                     578******************************************************************************************** PP

                     EEEEE...TT-SS-EEEEEE--GGG-........-S---SS CS
  Succ_DH_flav_C  96 khtlasldaakeeveleyepveletl........kpkeRsY 128
                     khtl++++++++ v+l+y++v  +t+        +p +R+Y
      EPX73916.1 601 KHTLTWQKNTTDPVTLKYRNVVNTTMdeaevkavPPFKRVY 641
                     ********99999********99999999888889999988 PP

>> GIDA  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   1.8   1.8e-05      0.04       1      31 [.      56      86 ..      56     109 .. 0.81
   2 !    8.6   0.0   0.00038      0.86     100     167 ..     197     268 ..     168     295 .. 0.66

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.8e-05
                CEEEE-SSHHHHHHHHHHHHTT--EEEEES- CS
        GIDA  1 dviViGgGhAGceAAlaaarlGakvlLithk 31
                d iV+G+G AG+ A + +a++G+k++ it+ 
  EPX73916.1 56 DAIVVGAGGAGLRATFGLAEAGFKTACITKL 86
                579***********************99654 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00038
                 HHHHHHHTSTTEEEEES-EEEEEECTTEEEEEE...ETTS-..EEEECEEEE--TT-BT-EEEETTEEEESSC CS
        GIDA 100 evteklenepnleiieeeveeliveekkvkgvv...tedge..tikakavviatGtflkgkihigekelsaGr 167
                  + + l+++ n  i    +++l++e+++++gv+   +edg+   ++a+++v+atG + ++   + + ++ +G 
  EPX73916.1 197 LYGQSLRHNTNFFIE-YFAMDLLMENGECRGVIamnLEDGTihRFRAHKTVLATGGYGRSYFSCTSAHTCTGD 268
                 444556666666554.455666699*9999987222455652257788***********99999888777776 PP

>> Thi4  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   0.1   2.6e-05     0.059      18      48 ..      55      84 ..      44     103 .. 0.89
   2 ?   -2.3   0.0      0.96   2.2e+03      55      90 ..     122     159 ..     119     165 .. 0.78
   3 !    5.2   0.0    0.0049        11     207     233 ..     421     448 ..     410     449 .. 0.81
   4 ?    2.8   0.0     0.026        58     148     175 ..     607     634 ..     597     640 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 2.6e-05
                EEEEEE--SHHHHHHHHHHHHCTTS-EEEEE CS
        Thi4 18 sDvvivGaGssGLtaayylakkpdlkvaile 48
                 D ++vGaG +GL a++ la++ ++k+a + 
  EPX73916.1 55 YDAIVVGAGGAGLRATFGLAEA-GFKTACIT 84
                599*******************.***99886 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.96
                 TTTTTTST.TBSEEEEETTTHHH.HHHTT---EEESSE CS
        Thi4  55 GGawlGGq.lfsaivvrkpakel.Ldelgikyedegdy 90 
                 G  wlG q   +++  + pa  l L+ +g++++ ++++
  EPX73916.1 122 GSDWLGDQdAIHYMTKEAPAAVLeLEHFGVPFSRTKEG 159
                 7789998846899999999887669999*999877765 PP

  == domain 3  score: 5.2 bits;  conditional E-value: 0.0049
                 HECEEETTEEE-THHH.HHHHT-EB--S CS
        Thi4 207 ktrevvpnlyvaGmev.aevdganRmGp 233
                 +  +vvp+ly+aG ++   v+g+nR+G+
  EPX73916.1 421 GNDQVVPGLYAAGEAAcVSVHGGNRLGA 448
                 4578*********8652689******97 PP

  == domain 4  score: 2.8 bits;  conditional E-value: 0.026
                 TSS.-B-EEEEEEEEEE--GSSSTTTTH CS
        Thi4 148 tqscvDPlvirakvvvdatGhdgeivav 175
                 ++   DP +++ + vv++t  ++e+ av
  EPX73916.1 607 QKNTTDPVTLKYRNVVNTTMDEAEVKAV 634
                 45678******************99887 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.1   2.5e-06    0.0056       1      31 [.      55      89 ..      55     129 .. 0.84
   2 ?   -2.2   0.0      0.85   1.9e+03      89     110 ..     231     252 ..     188     276 .. 0.78
   3 ?    2.9   0.0     0.024        54     249     278 ..     405     436 ..     394     450 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 2.5e-06
                 CSEEEE--SHHHHHHHHHHHHHTS-EEEEE....T CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....x RF
  Pyr_redox_2  1 kdvvviGgGpAGlaaaltlaqagakvtlve....l 31
                 +d +v+G+G AGl+a   la+ag+k++++      
   EPX73916.1 55 YDAIVVGAGGAGLRATFGLAEAGFKTACITklfpT 89
                 5789*************************544432 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.85
                  EEECTCEEEEEESEEEE---EE CS
                  xxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2  89 kkkegdeekiaydklvlAtGss 110
                  ++++g  +++ ++k vlAtG+ 
   EPX73916.1 231 NLEDGTIHRFRAHKTVLATGGY 252
                  4555677788899999999974 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.024
                  T-EEEETTEE.E--TTSBES.STTEEE-GGGC CS
                  xxxxxxxxxx.xxxxxxxxx.xxxxxxxxxxx RF
  Pyr_redox_2 249 glelderggi.vvdeflrtn.vpgiyaiGDva 278
                  g+++  +g +  +de+++ + vpg+ya+G  a
   EPX73916.1 405 GIPTRYTGEVlTIDENGNDQvVPGLYAAGEAA 436
                  6677666766589****8888********988 PP

>> FAD_binding_3  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.2   1.1e-05     0.024       2      37 ..      55      90 ..      54     102 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.1e-05
                   EEEEEE--SHHHHHHHHHHHHTTHHEEEEESSSSSC CS
  FAD_binding_3  2 tdVlIVGaGpaGlmlallLseaGvrvvlvekrsttv 37
                   +d ++VGaG aGl ++  L+eaG ++ +++k   t 
     EPX73916.1 55 YDAIVVGAGGAGLRATFGLAEAGFKTACITKLFPTR 90
                   6889**************************986554 PP

>> Lycopene_cycl  Lycopene cyclase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00013       0.3       1     143 [.      56     193 ..      56     217 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00013
  Lycopene_cycl   1 DvvviGaGpAglslAarlteakpglkvvlieaspsllfpnny.vWsdefedlgaleecvehsWsgtivylddgkkillg.raYgrvsskrlkeell 94 
                    D +v+GaG Agl+    l  a++g k  +i    +l fp +  +   ++    al ++ +  W+ +     +g+  l +  a + ++++  +++l+
     EPX73916.1  56 DAIVVGAGGAGLRATFGL--AEAGFKTACI---TKL-FPTRShTVAAQGGINAALGNMTKDDWRWHFYDTVKGSDWLGDqDAIHYMTKEAPAAVLE 145
                    789***************..9*********...555.66665355555544445***********9999999999998866788899999999999 PP

  Lycopene_cycl  95 erlvengvklleakvesveeeea.geslvvleggrkirarlvvdarglas 143
                     +    gv + + k  ++ +  + g+sl + +gg+  r+ +v d +g   
     EPX73916.1 146 LEHF--GVPFSRTKEGKIYQRAFgGQSLEYGKGGQAYRCAAVADRTGHSL 193
                    9988..***************999999*****************999333 PP

>> HI0933_like  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.3    0.0006       1.3       2      31 ..      56      85 ..      55     112 .. 0.82
   2 ?   -1.3   0.0      0.29   6.6e+02     150     165 ..     237     252 ..     224     278 .. 0.83
   3 ?   -2.7   0.0       0.8   1.8e+03     373     384 ..     424     435 ..     421     443 .. 0.77

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0006
                 SEEEE--SHHHHHHHHHHHHTT--EEEE-S CS
  HI0933_like  2 dviviGgGaAGlmaAisaakrgkrVlllek 31
                 d iv+G+G AGl a+  +a++g +++ + k
   EPX73916.1 56 DAIVVGAGGAGLRATFGLAEAGFKTACITK 85
                 89********************99988766 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.29
                  TEEEEESEEEE----S CS
  HI0933_like 150 eeeleadklvlAtGGl 165
                   ++++a+k+vlAtGG 
   EPX73916.1 237 IHRFRAHKTVLATGGY 252
                  46799*********95 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 0.8
                  TTSTTEEE-GGG CS
  HI0933_like 373 kkvpgLffaGEv 384
                  + vpgL+ aGE 
   EPX73916.1 424 QVVPGLYAAGEA 435
                  579********5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (641 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       386  (0.0215294); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.40
# Mc/sec: 4797.94
//
Query:       EPX73917.1  [L=1285]
Description: DNA repair protein Rad50 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.8e-31  110.2   1.8    1.8e-31  110.2   1.8    8.2  4  AAA_23         AAA domain
      9e-11   41.6  20.7    1.5e-06   27.8   0.0    3.6  3  SMC_N          RecF/RecN/SMC N terminal domain
      2e-08   34.4   9.6    0.00012   22.0   0.0    4.3  3  AAA_21         AAA domain, putative AbiEii toxin, Type IV TA 
    2.7e-05   24.1   7.0    2.7e-05   24.1   7.0    5.7  3  AAA_15         AAA ATPase domain
    0.00015   21.9   0.0    0.00062   20.0   0.0    2.1  1  SbcCD_C        Putative exonuclease SbcCD, C subunit
    0.00096   18.9   0.0     0.0021   17.8   0.0    1.5  1  AAA_29         P-loop containing region of AAA domain
     0.0037   17.1   0.1     0.0037   17.1   0.1    5.2  5  Rad50_zn_hook  Rad50 zinc hook motif
  ------ inclusion threshold ------
      0.038   14.3   0.1      0.038   14.3   0.1    3.8  4  AAA_22         AAA domain
      0.039   14.4   0.0      0.039   14.4   0.0    5.6  2  ABC_tran       ABC transporter
      0.048   12.3   0.0      0.048   12.3   0.0    7.5  7  AAA_13         AAA domain
      0.085   13.2   0.0      0.085   13.2   0.0    4.0  4  AAA_16         AAA ATPase domain


Domain annotation for each model (and alignments):
>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.2   1.8   1.1e-34   1.8e-31       1     199 [.       6     246 ..       6     247 .. 0.77
   2 ?   -2.8  15.1       4.5   7.3e+03      70     196 ..     216     344 ..     205     355 .. 0.54
   3 ?    3.5  15.7     0.055        89      59     196 ..     580     756 ..     564     774 .. 0.62
   4 ?   -1.6  11.7         2   3.3e+03     118     191 ..     708     792 ..     706     815 .. 0.58

  Alignments for each domain:
  == domain 1  score: 110.2 bits;  conditional E-value: 1.1e-34
      AAA_23   1 kLkienfrsf...rdqeidFskgltlItGpNGaGKTTildAiklaLygetprlsrksgrgfeksdveiesegkvkayveltfenkdgrytrsiererel 96 
                 k++i ++rsf   ++++i+F ++ltlI+G+NG+GKTTi++++k+a +g  p   ++ ++g++ +d+++  e++v a+v+l f+n++ ++ ++++r+ +l
  EPX73917.1   6 KMSIMGIRSFdsrSRESIQFFSPLTLIVGQNGSGKTTIIECLKYAATGILP---PNTKGGAFIHDPKLCGEKEVLAQVKLAFKNTNQIR-MICTRSLQL 100
                 689*******9866678*******************************655...566789***************************97.999999998 PP

      AAA_23  97 skkkgkttkkaklellei.............deleqfisellgskkiilnlilflgqer.feefel....kdkke...rleelekeleeledekkllek 174
                   kk+ +++k+   +l i             +el+ +++ +lg++ + l++++f++qe+ f+++++    k++++   +  ++ k+le+l+++++ +e+
  EPX73917.1 101 LVKKTTRQQKTLDGQLLIvndgerstisnrcAELDLQVPLSLGVSRALLDYVIFCHQEEsFWPLSEpsnlKKRFDeifESMKYAKALEQLKNVRRDQEN 199
                 8888888888844333333546666676677777777777999**99**88777777666888887532244444666666678888888887777777 PP

      AAA_23 175 l......................eqekekekeleeleeeleeilkel 199
                 +                      +q+   +k+++ ++ ++ee+++++
  EPX73917.1 200 QikvdqanlvhfrsdkeraekirLQLHGSQKRISFINHRIEELDQKI 246
                 77888888888777766666666566666667777777777777776 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 4.5
      AAA_23  70 kvkayveltfenkdgrytrsiererelskkkgkttkkaklelleideleqfisellgskkiilnlilflgqer.....................feefe 147
                 + ++ ++l++   ++r   +i  ++e+ ++k + t k + el++ +e  ++                     +                      +++e
  EPX73917.1 216 ERAEKIRLQLHGSQKR-ISFINHRIEELDQKISHTAKLQDELFRSTEEFEQK--------------------EvaisqyenhctflassiddlkLHMIE 293
                 3333344444333333.23444444444444444444444444444443333....................334444444444444444666799999 PP

      AAA_23 148 lkdkkerleelekeleeledekk..llekleqekekekeleeleeeleeil 196
                  +++ + le+++  ++e+ ++++  lle ++++ + e +l+e ++++e++ 
  EPX73917.1 294 MNNTTDDLENMSANFNEQVETEQklLLELENNKSSTEIRLSENRKRMEDLS 344
                 999999*****9999998765542233333344444446666666666654 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.055
      AAA_23  59 eksdveiesegkvkayveltfenkdgrytrsiererelskkkgkttkkaklelleideleqfise...llgskki.....ilnlilflgqer....... 142
                   ++ + + +  ++++vel++++ + r     e+ ++l + ++++ + ++ ++++ de +++i +    ++ +k+     ++ ++++ ++ +       
  EPX73917.1 580 AIDELKKKLNSANATVVELEYKYSTYR-----EELFQLESRNSEKAQLSQYQSVNLDEHNENIHKldtRIEDSKRtahslQFGISFYEKAIQmsdshha 673
                 4455555555667788*****999995.....5667777788888888888888887777777664445666666888888888888777778889999 PP

      AAA_23 143 ....feefel...kdkke..............rleelekeleeledekkllekl...........eqekekekeleeleeeleeil 196
                     + +fe+   +                  +l +++++le l +e+k l ++             +kek + l+  e++le+++
  EPX73917.1 674 cqlcQRMFENdeeA---AfvehcramienipgKLLDVNQQLESLHEERKALSDVipliqearsikSSIKEKSDILTITEQQLESAK 756
                 99995555553331...244455555555555666666666666666665555555553336655333444444444444444444 PP

  == domain 4  score: -1.6 bits;  conditional E-value: 2
      AAA_23 118 eqfisellgskkiilnlilflgqerfeefelkdkkerleelekeleeledekkllekl...........eqekekekeleeleee 191
                 +q++++l + +k+ +++i ++++ r  + + k+k++ l   e++le +++++  l+ +           e ++ k k ++ l+ee
  EPX73917.1 708 NQQLESLHEERKALSDVIPLIQEARSIKSSIKEKSDILTITEQQLESAKEQAASLDLElkdvskkhqsfESLNLKLKDIDRLNEE 792
                 6788888888888888899999999666666777776666666666666666655555433333333332222222222222222 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.0   9.3e-10   1.5e-06       2     106 ..       4     107 ..       3     136 .. 0.75
   2 ?   -0.9   0.1      0.56   9.2e+02     102     144 ..     438     477 ..     398     481 .. 0.67
   3 !   12.6  17.3   4.3e-05      0.07      92     205 ..     472    1258 ..     460    1274 .. 0.85

  Alignments for each domain:
  == domain 1  score: 27.8 bits;  conditional E-value: 9.3e-10
                 EEEEEEESETTEECE.EEEEETTSSEEEEEESTTSSHHHHHHHHHHHCTT.TTTTTTCHCCCCCC--.BTTCSSTTEEEEEEEEEETTEESSSSSSCEE CS
                 xxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N   2 lkrleienFksyagk.tvilpfsksftaivGpNGSGKsnlldAilFvLGersakklrseklsdlihk.skekasvkkaeveitfdnedkklkiekeevs 98 
                 + ++ i + +s+  + + +++f + +t ivG+NGSGK+ +++ +++           ++k  + ih  +  +++   a+v++ f+n+++   i + +++
  EPX73917.1   4 IDKMSIMGIRSFDSRsRESIQFFSPLTLIVGQNGSGKTTIIECLKYAATGIL---PPNTKGGAFIHDpKLCGEKEVLAQVKLAFKNTNQIRMICTRSLQ 99 
                 7789999999997541567888899*******************99865322...24678889999977778888999999999999998666555544 PP

                 EEEEEETT CS
                 xxxxxxxx RF
       SMC_N  99 isrrvkrk 106
                 + +++ + 
  EPX73917.1 100 LLVKKTTR 107
                 44333333 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.56
                 EEETTSEEEEEETTEEE-HHHHHHHHHCTT-STTCS-HHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 102 rvkrkgeseykingkevtkkevsellesagiskelLSgGektL 144
                 ++ +   ++ +i   + + ++++++ ++ ++ +e+L +Gek L
  EPX73917.1 438 SIGN---NQKTISFIQSRIEDLRHMAQTRDLLSEELKRGEKEL 477
                 3333...3445666677889999******************98 PP

  == domain 3  score: 12.6 bits;  conditional E-value: 4.3e-05
                  SSSSCEEEEEEEETTSEEEEEETTEEE-HHHHHHHHHCTT-STT..................................................... CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..................................................... RF
       SMC_N   92 iekeevsisrrvkrkgeseykingkevtkkevsellesagiske..................................................... 135 
                    ++e++  r++++++e + ki++++ + ++ ++ le+    ++                                                     
  EPX73917.1  472 RGEKELQDARKIYEDNEWNKKIDKERTEIRDTERELENLTSLSDklhdnaniysklqllvetreklmanveearkyfkqryfeltaldihtvdefye 568 
                  5566666677777777777777777777777777777765544457777777777777777777777777777777777777777777777777777 PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX73917.1  569 nldaslqksqvaidelkkklnsanatvveleykystyreelfqlesrnsekaqlsqyqsvnldehnenihkldtriedskrtahslqfgisfyekai 665 
                  7777777777777777777777777777777777777777777777777777777777777777788888888888888888888888888888888 PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX73917.1  666 qmsdshhacqlcqrmfendeeaafvehcramienipgklldvnqqleslheerkalsdvipliqearsikssikeksdiltiteqqlesakeqaasl 762 
                  8888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX73917.1  763 dlelkdvskkhqsfeslnlklkdidrlneetekckmhisdlqaqlspslkeldinqiglerkkmaemnktskknletilneetkqkreldnlniank 859 
                  8888888888888888888888888888888888888888888888888888888888889999999999999999999999999999999999999 PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX73917.1  860 erevkfsdlklkinelhqlevevkncdekkakllgdledakqsceeqrplfnrlnddmlslesnlekleeksrtllqtkngflqqvqdwnrelqidi 956 
                  99999999999999999999999999999999999999999999999999999999999999*********************************** PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX73917.1  957 qfeldrlvkekdglyrtveydlselnsitqkiksiqerladlrsrernisdnlrlrrlhsqflealenknsliaqqaktnrqafrdkmeslkiqyga 1053
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX73917.1 1054 lnaeragllgecrqldsgvnqltqdlnleykdsderyrrqliktrttdkanddigkyakaldiaimqlhslkmneinrivdelwkqtycgtdidtil 1150
                  ************************************************************************************************* PP

                  ..............................CS-HHHHHHHHHHHHHHHHCCS-..-SEEEECTTTTTS-HHHHHHHHHHHH......HHCTTSEEEE CS
                  ..............................xxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxx RF
       SMC_N  136 ..............................lLSgGektLvalaLlfAiqkvkp..aplyllDeidaaLDeknvkkvaellk......eksknaQfiv 194 
                                                  S G+k L+ + +++A+ ++      +  lDe   +LDe n+  +a+ l       +++ n+Q+i+
  EPX73917.1 1151 irsdaegkgnrsynyrvcmvkgdaeldmrgRCSAGQKVLACIIIRLALAECLGvnCGILALDEPTTNLDEDNIISLAKSLSkivefrRRQANFQLII 1247
                  ***********************************************9999651156999*************9999987533334367889***** PP

                  E-SSHHHCCC- CS
                  xxxxxxxxxxx RF
       SMC_N  195 islreemleka 205 
                  i+++e++++ +
  EPX73917.1 1248 ITHDEQFIRLV 1258
                  ******99876 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0   7.4e-08   0.00012       1      34 [.      29      59 ..      29      85 .. 0.77
   2 ?   -2.8   0.1       2.7   4.5e+03     144     199 ..     211     270 ..     182     306 .. 0.60
   3 !   15.8   0.4   5.7e-06    0.0093     219     299 ..    1110    1252 ..     823    1256 .. 0.75

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 7.4e-08
      AAA_21  1 lnvliGpNgsGKSnLLdaldllarldrdvegltd 34
                l++++G NgsGK++++++l+++   ++ + + ++
  EPX73917.1 29 LTLIVGQNGSGKTTIIECLKYA---ATGILPPNT 59
                69*****************999...444444444 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 2.7
      AAA_21 144 ltditsrawsllllldglrke....rigllnifadyfgfakekrllqrlvrslklveiel 199
                 + ++++ra++++l l+g+ k+    +++  ++ ++  + ak+++ l+r + ++ + e  +
  EPX73917.1 211 FRSDKERAEKIRLQLHGSQKRisfiNHRIEELDQKISHTAKLQDELFRSTEEFEQKEVAI 270
                 444555555555555555555555555555555555555555555555555555554444 PP

  == domain 3  score: 15.8 bits;  conditional E-value: 5.7e-06
      AAA_21  219 r.....................................................gvvflengdgqelparel.SdGtkrllalltallralkkg... 258 
                  +                                                     +++    +++ el++r   S G+k l++++  l+ a   g   
  EPX73917.1 1110 YakaldiaimqlhslkmneinrivdelwkqtycgtdidtilirsdaegkgnrsyNYRVCMVKGDAELDMRGRcSAGQKVLACIIIRLALAECLGvnc 1206
                  155555555555555555555555555555566666666666666666666666777777788888888888899*****9999988888888889* PP

      AAA_21  259 sllliDEpEngLHPkllrrllell...kelsr.....ngaQviltTHSp 299 
                  ++l++DEp ++L+   + +l++ l       +      + Q+i+ TH+ 
  EPX73917.1 1207 GILALDEPTTNLDEDNIISLAKSLskiV---EfrrrqANFQLIIITHDE 1252
                  **************77766665554331...12334557********96 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   7.0   1.6e-08   2.7e-05      17     244 ..      21     328 ..       4     347 .. 0.51
   2 ?   -3.0  25.2       2.7   4.4e+03      57     262 ..     311     531 ..     294     557 .. 0.63
   3 ?    3.6  24.7     0.027        44      54     369 .]     836    1255 ..     812    1255 .. 0.51

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 1.6e-08
      AAA_15  17 veidlseeltvliGkNnsGKSsilealdlFlnnkekkn..........................kkvikiekedleifeniseskdikIdvef...... 83 
                  +i++ + lt+++G N+sGK++i+e l++  +   + n                          k                                  
  EPX73917.1  21 ESIQFFSPLTLIVGQNGSGKTTIIECLKYAATGILPPNtkggafihdpklcgekevlaqvklafK---------------------------Ntnqirm 92 
                 67887777*******************99999887777866666666555555444444444440...........................3334444 PP

      AAA_15  84 .............................................................................aek.ekakeyektlkskekkka 104
                                                                                                k  +++++e+ ++ k+ +  
  EPX73917.1  93 ictrslqllvkkttrqqktldgqllivndgerstisnrcaeldlqvplslgvsralldyvifchqeesfwplsepsnL-KkRFDEIFESMKYAKALE-- 188
                 444455555566666666666666667777777777777777777799999998888888888776666665443221.122333333333322222.. PP

      AAA_15 105 dlllkkkesdlkktikdkklklkknelsdekisvekkkskkelpkekeeklekekeelkidkedlkklikkleeslkkee................... 184
                   +lk+ ++d  + ik            ++  ++ +  s ke  ++ +  l+ +++ +++ +  +++l +k++   k ++                   
  EPX73917.1 189 --QLKNVRRDQENQIK------------VDQANLVHFRSDKERAEKIRLQLHGSQKRISFINHRIEELDQKISHTAKLQDelfrsteefeqkevaisqy 273
                 ..23333333333333............33333333333444444445555555555555566666666655555555553333333333333333333 PP

      AAA_15 185 .elknvlksaiiklllisakRnvsdedsekkssllgklkekileealqekleeelteklke 244
                      +l s+i++l+l + + n++++d e+    +++ +++ +e+   +kl +el+ + ++
  EPX73917.1 274 eNHCTFLASSIDDLKLHMIEMNNTTDDLEN----MSANFNEQVETE--QKLLLELENNKSS 328
                 344445555555555544444444443333....333333333321..1122222222222 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 2.7
      AAA_15  57 vikiekedleifeniseskdikIdvef...........aekekakeyektlkskekkkadlllkkkesdlkktikdkklklkknelsdekisvekkksk 144
                  + +e++ l + en++ s +i++  +            +++++  + e+t+++k      +++ + + +l+ +++ ++ ++ +++l +   +  ++k+ 
  EPX73917.1 311 QVETEQKLLLELENNKSSTEIRLSENRkrmedlsanlgRAEGELASLERTKRRK------GETLENIASLHGFSERNENEIITKYLEYLDTNMSENKKD 403
                 344444444444455555555554444666555433332223333333333333......344556888999999999999999999999999999999 PP

      AAA_15 145 kelpkekeeklekekeelkidkedlkklikkleeslkkeeelknvlksaiiklllisakRnvsdedsekkssllgklkekileealqekl.....eeel 238
                  +    k++++  ++e lk     l+k+i  le s+  +++  ++++s i++l+     R+  +e+ +  ++ l  + + + ++  ++k      e+++
  EPX73917.1 404 LQQIRDKRKEKSARIEGLKAHEMYLQKTIAGLEDSIGNNQKTISFIQSRIEDLRHMAQTRDLLSEELKRGEKELQDARKIYEDNEWNKKIdkertEIRD 502
                 9999999999999***********************9999**********************9988888777777666666555555555442223333 PP

      AAA_15 239 teklkeiqeklkeidkklaeelk........k 262
                     ++ +e+l+ +++kl ++++         
  EPX73917.1 503 ---TERELENLTSLSDKLHDNANiysklqllV 531
                 ...33333344444444433333332333330 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.027
      AAA_15   54 n.........kkvikiekedleifeniseskdikIdvef...........aekekakeyektlkskekkkadlllkkkesdlkktikdkklklkkne 130 
                  n         k++  +++ ++ ++e + ++ d+k+++++           +                         +k+ +l   ++d k+ +++++
  EPX73917.1  836 NletilneetKQKRELDNLNIANKEREVKFSDLKLKINElhqlevevkncD-------------------------EKKAKLLGDLEDAKQSCEEQR 907 
                  122222222222233333333333344444444444444222222222110.........................222222222222222222222 PP

      AAA_15  131 lsdekisvekkks.....................kkelpkekeeklekekeelkidkedlkklikkleeslkkee...................... 184 
                     ++ ++++                         ++                                     +                      
  EPX73917.1  908 PLFNRLNDDMLSLesnlekleeksrtllqtkngfLQQV------------------------------------Qdwnrelqidiqfeldrlvkekd 968 
                  22222222221111111111111111222222223333....................................14444444444443444444444 PP

      AAA_15  185 ..............elknvlksaiik.lllisakRnvsdedsek.kssllgklkekileealqekleeelteklkeiqeklkeidkklaeelk.... 261 
                                ++ +++ks ++   +l s +Rn+sd++      s + +++e++++ ++q+   + +++++ +  e+lk +++ l++e +    
  EPX73917.1  969 glyrtveydlselnSITQKIKSIQERlADLRSRERNISDNLRLRrLHSQFLEALENKNSLIAQQ--AKTNRQAFRDKMESLKIQYGALNAERAgllg 1063
                  4444444444544477777777776415788888888885443303344555555555544443..4445555555555555555555555556666 PP

      AAA_15  262 ..........................kilkkkidkikkfnykgkkneeieik............................................. 287 
                                            +                        +                                             
  EPX73917.1 1064 ecrqldsgvnqltqdlnleykdsderY------------------------Rrqliktrttdkanddigkyakaldiaimqlhslkmneinrivdel 1136
                  664443333111111111111222220........................1222333444455555555555555555555555555555555555 PP

      AAA_15  288 ...................................ddeelplnkn.GsGvqrllllillileaekkdekeeknvilliEEPEahLHpqaqkvlikll 348 
                                                      d el++  + + G++ l  +i+ ++ ae       +  il+++EP ++L  ++  +l+k+l
  EPX73917.1 1137 wkqtycgtdidtilirsdaegkgnrsynyrvcmvkGDAELDMRGRcSAGQKVLACIIIRLALAECL---GVNCGILALDEPTTNLDEDNIISLAKSL 1230
                  5555555555555555*****************665555555543357****************99...99************************** PP

      AAA_15  349 kelandnkt....QviitTHSphii 369 
                   ++++  +     Q+ii TH + +i
  EPX73917.1 1231 SKIVEFRRRqanfQLIIITHDEQFI 1255
                  *****9988999********99886 PP

>> SbcCD_C  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   3.8e-07   0.00062      19      88 ..    1171    1230 ..    1158    1232 .. 0.82

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 3.8e-07
     SbcCD_C   19 edgkekelsrssgtlSGGekqflaylalaaalaalyssaegrepalrlvfLDEAFsklDeesiatllell 88  
                  ++++e    +++g+ S G+k +la +++ +ala  ++       ++++++LDE   +lDe++i +l + l
  EPX73917.1 1171 KGDAE---LDMRGRCSAGQK-VLACIIIRLALAECLGV------NCGILALDEPTTNLDEDNIISLAKSL 1230
                  44444...6899********.*****************......49****************98887765 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   1.3e-06    0.0021      23      45 ..      27      50 ..       7      59 .. 0.80

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 1.3e-06
      AAA_29 23 g.atlltGpsGsGKSTllDAiqal 45
                +  tl++G++GsGK+T++  +++ 
  EPX73917.1 27 SpLTLIVGQNGSGKTTIIECLKYA 50
                3479**************887765 PP

>> Rad50_zn_hook  Rad50 zinc hook motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1       3.2   5.2e+03       2      16 ..     236     250 ..     235     254 .. 0.75
   2 ?   -3.2   0.0       4.7   7.7e+03       5      13 ..     581     589 ..     579     592 .. 0.66
   3 !   17.1   0.1   2.2e-06    0.0037       8      51 ..     661     703 ..     658     704 .. 0.94
   4 ?   -2.1   0.1       2.2   3.5e+03       4      18 ..     864     878 ..     862     879 .. 0.82
   5 ?   -2.6   0.3       3.3   5.3e+03      31      48 ..     886     903 ..     886     906 .. 0.75

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 3.2
                    HHHHHHHHHHHHHHT CS
  Rad50_zn_hook   2 hqeteelnkkieelk 16 
                    + ++eel +ki+ ++
     EPX73917.1 236 NHRIEELDQKISHTA 250
                    567889999988766 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 4.7
                    HHHHHHHHH CS
  Rad50_zn_hook   5 teelnkkie 13 
                    ++el+kk++
     EPX73917.1 581 IDELKKKLN 589
                    677777765 PP

  == domain 3  score: 17.1 bits;  conditional E-value: 2.2e-06
                    HHHHHHHHTT-SEE-TTT--EE-HHHHHHHHHHHHHHHHHHH.. CS
  Rad50_zn_hook   8 lnkkieelkeakgcCPlCgReldeehrseLikelqsklerlpee 51 
                    ++k+i +  +++  C lC+R +++++ + ++++ ++++e++p +
     EPX73917.1 661 YEKAIQMSDSHH-ACQLCQRMFENDEEAAFVEHCRAMIENIPGK 703
                    899******999.***************************9965 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 2.2
                    HHHHHHHHHHHHTT- CS
  Rad50_zn_hook   4 eteelnkkieelkea 18 
                    ++++l+ ki+el++ 
     EPX73917.1 864 KFSDLKLKINELHQL 878
                    778999******985 PP

  == domain 5  score: -2.6 bits;  conditional E-value: 3.3
                    HHHHHHHHHHHHHHHHHH CS
  Rad50_zn_hook  31 eehrseLikelqsklerl 48 
                    +e++++L+ +l++  ++ 
     EPX73917.1 886 DEKKAKLLGDLEDAKQSC 903
                    688999999998876665 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.1   2.3e-05     0.038       7     100 ..      29     122 ..      27     136 .. 0.77
   2 ?   -3.0   0.2         5   8.1e+03      27      70 ..     195     248 ..     184     275 .. 0.63
   3 ?   -1.8   0.1       2.2   3.6e+03      43      70 ..     548     580 ..     511     610 .. 0.64
   4 ?   -1.2   0.2       1.4   2.2e+03      41      90 ..     972    1026 ..     941    1035 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 2.3e-05
      AAA_22   7 ilvvtGesGtGKTtllrrlleqldeeakaee....erpevvfvtlpsstsskdllrellralglelka...erlsseellealeqalraravielliiD 98 
                 +++++G+ G+GKTt ++ l++ ++           + ++ +f+  p++++ k++l ++  a+++ +      + s++ l+++ +++ ++ +  +lli+ 
  EPX73917.1  29 LTLIVGQNGSGKTTIIECLKYAAT------GilppNTKGGAFIHDPKLCGEKEVLAQVKLAFKNTNQIrmiCTRSLQLLVKKTTRQQKTLDG-QLLIVN 120
                 589******************983......2334467777799999***9999999999999965554776666666666777777777777.788776 PP

      AAA_22  99 Ea 100
                 + 
  EPX73917.1 121 DG 122
                 65 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 5
      AAA_22  27 eqldeeakaee..........erpevvfvtlpsstsskdllrellralglelka 70 
                 +  ++++k ++          er+e ++ +l +s ++ ++ ++  ++l+++ ++
  EPX73917.1 195 RDQENQIKVDQanlvhfrsdkERAEKIRLQLHGSQKRISFINHRIEELDQKISH 248
                 444444444445566666666777777777777777777766666666665555 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 2.2
      AAA_22  43 v...fvtlpsst..sskdllrellralglelka 70 
                 +   +++l+++   + ++++++l   l+ ++ a
  EPX73917.1 548 FkqrYFELTALDihTVDEFYENLDASLQKSQVA 580
                 134466666666667888888887777766655 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 1.4
      AAA_22   41 evvfvtlpsstsskdllrellralglelka.....erlsseellealeqalrara 90  
                  ++v+++l++++s ++  + + + l + +++      +l++++l +++ +al+++ 
  EPX73917.1  972 RTVEYDLSELNSITQKIKSIQERLADLRSRernisDNLRLRRLHSQFLEALENKN 1026
                  5679999999988888888888888777777777777777777777777777665 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   2.4e-05     0.039      14      32 ..      30      48 ..      27     116 .. 0.89
   2 ?    7.5   0.8    0.0035       5.7     107     136 ..    1180    1215 ..     981    1216 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 2.4e-05
                EEEEESTTSSHHHHHHHHT CS
                xxxxxxxxxxxxxxxxxxx RF
    ABC_tran 14 vaivGenGaGKStLlklla 32
                + ivG+nG+GK+t++++l 
  EPX73917.1 30 TLIVGQNGSGKTTIIECLK 48
                68*************9985 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0035
                  GGS-HHHHH......HHHHHHHHHHTSSEEEEESTT CS
                  xxxxxxxxx......xxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  107 ssLSgGqkq......rvalarallkkpkllllDEpt 136 
                     S Gqk+      r+ala++l  +  +l lDEpt
  EPX73917.1 1180 GRCSAGQKVlaciiiRLALAECLGVNCGILALDEPT 1215
                  566888887666667999*****************9 PP

>> AAA_13  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   2.9e-05     0.048       2      53 ..      12      64 ..      11      94 .. 0.78
   2 ?   -3.7  21.8       2.1   3.4e+03     267     465 ..     168     373 ..     153     381 .. 0.61
   3 ?    1.9   3.6      0.04        66     397     467 ..     383     453 ..     369     464 .. 0.56
   4 ?   -5.4  47.0       6.9   1.1e+04      91     454 ..     486     864 ..     485     878 .. 0.65
   5 ?    1.1   5.6     0.074   1.2e+02     365     457 ..     897    1006 ..     865    1010 .. 0.65
   6 ?   -2.6  10.5      0.93   1.5e+03     284     438 ..     923    1085 ..     909    1133 .. 0.59
   7 ?    6.9   0.0    0.0013         2     528     580 ..    1207    1261 ..    1183    1284 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 2.9e-05
      AAA_13  2 vrifdfr.gaeledfkriNliYGwNGaGKTtLSrllrslelgetepkfangsi 53
                +r+fd+r  ++++ f+   li G+NG+GKTt+ + l+   +g   p+ + g++
  EPX73917.1 12 IRSFDSRsRESIQFFSPLTLIVGQNGSGKTTIIECLKYAATGILPPNTKGGAF 64
                577875525568889*********************99998888887777777 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 2.1
      AAA_13 267 aerkaaLeahFdd.efeekqerLekliekveskkselleklkavsdeasensafeedkeelkaeaealeeqLkglqrale..aK.rkepfksve.lesv 360
                 +++k++ ++ F++ ++++  e+L++   + e++++  +++l     ++++ ++ + + +  +++++ ++ ++++l ++++  aK  +e+f+s e  e+ 
  EPX73917.1 168 SNLKKRFDEIFESmKYAKALEQLKNVRRDQENQIKVDQANLVHFRSDKERAEKIRLQLHGSQKRISFINHRIEELDQKIShtAKlQDELFRSTEeFEQK 266
                 445555555554324555556666666666665554444443333333334445666666666666666666666666641123124555544423444 PP

      AAA_13 361 kakie.......sikklvaeineliakhNekvanleeekeeakkklelhlveeleseldeykkkykklekaieklekelkeeeaelkkleeeikeLekq 452
                 +  i+        + +++++++    + N+++++le+  ++ ++++e     e ++ l e++++++++e  ++++ k++++ +a+l  +e+e + Le++
  EPX73917.1 267 EVAISqyenhctFLASSIDDLKLHMIEMNNTTDDLENMSANFNEQVET----E-QKLLLELENNKSSTEIRLSENRKRMEDLSANLGRAEGELASLERT 360
                 444442222222555666666666666788888888888888888877....2.334457888999999999999999999999999999999999999 PP

      AAA_13 453 lrdekpaaeeink 465
                  r + ++ e+i++
  EPX73917.1 361 KRRKGETLENIAS 373
                 9999999888865 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.04
      AAA_13 397 kklelhlveeleseldeykkkykklekaieklekelkeeeaelkkleeeikeLekqlrdekpaaeeinkeL 467
                 +++   ++e l+ +++e kk+++++ ++ ++  ++++  +a    l++ i+ Le ++ + +++++ i + +
  EPX73917.1 383 NEIITKYLEYLDTNMSENKKDLQQIRDKRKEKSARIEGLKAHEMYLQKTIAGLEDSIGNNQKTISFIQSRI 453
                 33334444444455555555555555555555555555555555555556666666666666666555444 PP

  == domain 4  score: -5.4 bits;  conditional E-value: 6.9
      AAA_13  91 siekqekieklkkeikkleekleaaeaqlqkaek.....ekkklekeledeawkkivkkknsalsealkglky.eekfkerllkelkkknrkaaellsd 183
                 ++e ++ki+k+++ei++ e++le+ +   +k+++      k +l  e ++++ +++ +++++ +++ +  l + +    +++ ++l+     +++ +  
  EPX73917.1 486 DNEWNKKIDKERTEIRDTERELENLTSLSDKLHDnaniySKLQLLVETREKLMANV-EEARKYFKQRYFELTAlDIHTVDEFYENLDAS-L-QKSQVAI 581
                 578899********************999999998888844444444444444433.55555555444444444555555555555554.2.2222334 PP

      AAA_13 184 eelkakletvesenlpelaplslssidldalek.....aeilkkkvvgk...dseieeL....ienldladWVkqGlelheas......sdtCpFCgqp 264
                 +elk+kl++++ +  +   + s+  ++l +le+     a++ + + v+    ++ i +L     ++   a  ++ G++++e+       +  C+ C++ 
  EPX73917.1 582 DELKKKLNSANATVVELEYKYSTYREELFQLESrnsekAQLSQYQSVNLdehNENIHKLdtriEDSKRTAHSLQFGISFYEKAiqmsdsHHACQLCQRM 680
                 44445544444444444444444444444443333331222222222222344555555211122344556677788877642223233478******9 PP

      AAA_13 265 lpaerkaaLeahFddefeekqerLekliekveskkselleklkavsdeasensafeedkeelkaeaealeeqLkglqraleaKrkepfk.svelesvka 362
                 ++++  aa  +h      + +e++  ++ +v+++ ++l e+ ka+sd     +   ++   +k+ +++ ++ L+  +++le  +++ ++ ++el++v++
  EPX73917.1 681 FENDEEAAFVEH----CRAMIENIPGKLLDVNQQLESLHEERKALSDV----IPLIQEARSIKSSIKEKSDILTITEQQLESAKEQAASlDLELKDVSK 771
                 999887665555....55678889999999999988887777777774....4456778899999999999*********9777776666********* PP

      AAA_13 363 kiesikklvaeineliakhNekvanleeekeeakkklelhlveeleseldeykkkykklekai.eklekelkeeeaelkkleee.ikeLekqlr 454
                 k +s+++l  +  + i + Ne +++ +   ++++ +l  +l e   +++    kk+++++k+  ++le+ l+ee++++++l++  i+++e++++
  EPX73917.1 772 KHQSFESLNLK-LKDIDRLNEETEKCKMHISDLQAQLSPSLKELDINQIGLERKKMAEMNKTSkKNLETILNEETKQKRELDNLnIANKEREVK 864
                 **988776555.567***********************98877666777777788888887651557788888888888888755888887765 PP

  == domain 5  score: 1.1 bits;  conditional E-value: 0.074
      AAA_13  365 esikklvaeineliakhNekvanleeekeeakkklelhlv.................eeleseldeykkkykklekaieklekelkeeeaelkklee 444 
                  e +k++ +e   l ++ N  + +le++ e++++k +  l                   +++ eld++ k++++l +++e    el+ +++++k ++e
  EPX73917.1  897 EDAKQSCEEQRPLFNRLNDDMLSLESNLEKLEEKSRTLLQtkngflqqvqdwnrelqIDIQFELDRLVKEKDGLYRTVEYDLSELNSITQKIKSIQE 993 
                  45555555555555555555555555555555555554445555555555555444445666777888999********9999************** PP

      AAA_13  445 eikeLekqlrdek 457 
                  + ++L+ + r++ 
  EPX73917.1  994 RLADLRSRERNIS 1006
                  ******9999875 PP

  == domain 6  score: -2.6 bits;  conditional E-value: 0.93
      AAA_13  284 kqerLekliekveskkselleklkavsdeasensafeed..keelkaeaealeeqLkglqraleaKrkepfksve.lesvkaki...esikklvaei 374 
                  + e+Le++  +++++k+ +l+++++   e + +++fe d  ++e +   +++e  L +l+  +++K+k + +++  l s + +i    ++  l +++
  EPX73917.1  923 NLEKLEEKSRTLLQTKNGFLQQVQDWNRELQIDIQFELDrlVKEKDGLYRTVEYDLSELN-SITQKIKSIQERLAdLRSRERNIsdnLRLRRLHSQF 1018
                  445666666666666666666666666666666666665554555555555555555544.345555555554332555555554335777777777 PP

      AAA_13  375 neliakhNekvan.leeekeeakkklelhlv..eeleseldeykkkykklekaieklekelkeeeae 438 
                   e  ++ N  +a+  ++++++ ++k+e   +    l++e   +  + ++l+  +++l+++l+ e+++
  EPX73917.1 1019 LEALENKNSLIAQqAKTNRQAFRDKMESLKIqyGALNAERAGLLGECRQLDSGVNQLTQDLNLEYKD 1085
                  7777777776654144555666677666555222334444445566666666666666666655544 PP

  == domain 7  score: 6.9 bits;  conditional E-value: 0.0013
      AAA_13  528 kivviDDPvSSLDsnslfivfsliksrl..lkkkkakQlfiLTHnleffkevkkn 580 
                  +i  +D P   LD + + + +  + + +  ++++   Ql+i TH  +f + v+  
  EPX73917.1 1207 GILALDEPTTNLDEDNIISLAKSLSKIVefRRRQANFQLIIITHDEQFIRLVNTD 1261
                  78999********877776666666666544666666*************99874 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   5.2e-05     0.085      25      48 ..      28      51 ..      15     120 .. 0.85
   2 ?   -1.1   0.7       1.3   2.1e+03      42     107 ..     582     654 ..     576     805 .. 0.65
   3 ?   -1.8   0.3       2.1   3.5e+03      48      48 ..     941     941 ..     867    1033 .. 0.54
   4 ?   -2.5   0.0       3.7     6e+03      58     120 ..    1063    1133 ..    1053    1139 .. 0.61

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 5.2e-05
      AAA_16 25 elvllsGesGvGKsslvrellral 48
                +l+l++G+ G+GK++++++l+ a+
  EPX73917.1 28 PLTLIVGQNGSGKTTIIECLKYAA 51
                899***************999554 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 1.3
      AAA_16  42 rellralekdggiflrgkcdqlesaipysalaqalareellrqlldeaesaeleawrekleeala...................a 107
                 +el++ l+ +++ +++ +++ +           +  reel++ + +++e+a+l++++   +++ +                    
  EPX73917.1 582 DELKKKLNSANATVVELEYKYS-----------TY-REELFQLESRNSEKAQLSQYQSVNLDEHNenihkldtriedskrtahsL 654
                 5555555555555544444444...........33.6677777777777777777776666665554444444433333333330 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 2.1
      AAA_16  48 l 48 
                 +
  EPX73917.1 941 F 941
                 1 PP

  == domain 4  score: -2.5 bits;  conditional E-value: 3.7
      AAA_16   58 gkcdqlesa.........ipysalaqalareellrqlldeaesaeleawrekleealaavpelagaeasrll 120 
                  g+c+ql+s+         ++y    +   r++l++   +++++++ + ++++l+ a+ +  +l+  e +r+ 
  EPX73917.1 1063 GECRQLDSGvnqltqdlnLEYKDSDERY-RRQLIKTRTTDKANDDIGKYAKALDIAIMQLHSLKMNEINRIV 1133
                  5555554443344444446666666666.6688888888888888887777777766655555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1285 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2684  (0.149702); expected 358.6 (0.02)
Passed bias filter:                      580  (0.0323498); expected 358.6 (0.02)
Passed Vit filter:                       125  (0.00697194); expected 17.9 (0.001)
Passed Fwd filter:                        50  (0.00278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 2.16u 0.38s 00:00:02.54 Elapsed: 00:00:00.66
# Mc/sec: 5873.60
//
Query:       EPX73918.1  [L=106]
Description: protein involved in protein folding in the ER [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-08   34.0   0.1    3.5e-08   33.7   0.1    1.1  1  MMgT      Membrane magnesium transporter


Domain annotation for each model (and alignments):
>> MMgT  Membrane magnesium transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.7   0.1   1.9e-12   3.5e-08       5      98 ..      15      96 ..      11      98 .. 0.92

  Alignments for each domain:
  == domain 1  score: 33.7 bits;  conditional E-value: 1.9e-12
        MMgT  5 lllLlHagYSahehsallsaskkseqsatsLPlDitletlvslvllilglvlsaeeLkpIqlrkaagkieregenpfeelesrpgfldirkkrk 98
                ++lLlH + Sah + +++       +   sLP+ i++e l+ ++l++l ++ +a +L+ I l+k+++k       + ++l++r +fl i++ r 
  EPX73918.1 15 AFLLLHTARSAHGFVTTS-------NGYESLPIAIKIECLTITILFTLLTISTAAPLRCIVLSKWTTKSV-----DNSYLSYRINFLRIKELRD 96
                5799**********9888.......6789*************************************9998.....7899**********99886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       382  (0.0213063); expected 358.6 (0.02)
Passed bias filter:                      218  (0.0121591); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.28s 00:00:00.63 Elapsed: 00:00:00.42
# Mc/sec: 756.67
//
Query:       EPX73919.1  [L=577]
Description: hypothetical protein SOCG_03136 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   4.9e-143  477.2  41.8   6.1e-143  476.9  41.8    1.0  1  AA_permease    Amino acid permease
    2.7e-42  145.1  45.1    3.7e-42  144.7  45.1    1.1  1  AA_permease_2  Amino acid permease


Domain annotation for each model (and alignments):
>> AA_permease  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  476.9  41.8  6.8e-147  6.1e-143       1     475 [.      81     537 ..      81     540 .. 0.97

  Alignments for each domain:
  == domain 1  score: 476.9 bits;  conditional E-value: 6.8e-147
  AA_permease   1 hvlvialggviGtglfvglgvvlsqaGplgallayllagvviflvmlslgeiatngpksggfytyasrflgpelGfviGlnylfswitvlaleltaas 98 
                  h+++ia+gg+iGtglfvg+g+ l+++Gp+++++ y l+g+++++++++lge+a+++p +ggfyty  rf++p +Gf++G+ny+++++++++lelt+++
   EPX73919.1  81 HMQMIAIGGAIGTGLFVGSGSSLANGGPASVIIDYTLIGIMMYFTVYALGELAVAYPLAGGFYTYCMRFIDPGWGFACGWNYFLNYFVTFPLELTTCA 178
                  99************************************************************************************************ PP

  AA_permease  99 iliqfwelvtdlpkawvtgavflvvlliinlvgvkvygeaefilalikiiaiiafiivgiillaggkpnkgagfrflgdngsifknnlppgfakeeeg 196
                  i++++w   t+++   v++++fl+++++inl+gvk+yge+efil+ ik+ia  +fii+ ii+++gg p+++   r +     i  + + +g       
   EPX73919.1 179 ITFKYW---TEIN-SAVWISIFLFLIIFINLFGVKGYGEVEFILSTIKVIATTGFIILAIIINCGGVPTDH---RGYIGGKIISHQPFRHG------- 262
                  ******...9999.9********************************************************...77777777788888999....... PP

  AA_permease 197 afknfisvfvivvfaftGielvaiiagEvkdPeksiPkailqvviritifYvlsllligllvprndlgllndsasa.aspfvifikesgvsvlaplin 293
                   fk+f+svf +++f+f+G+e+v+++a+E+++P+ks+P a++qv++ri+ifYv +ll+i+llv+ +d +l+n s ++ +spfv++i+e+g+++l++++n
   EPX73919.1 263 -FKGFCSVFTTAAFSFSGTEAVGLAAAEAENPRKSLPHATRQVFWRIAIFYVVGLLMISLLVSPDDSDLMNNSSNTsVSPFVLAIREAGIKGLPSVFN 359
                  .*********************************************************************9888778********************* PP

  AA_permease 294 aviltaalssansslysasRvlyslakdglaPkvlkkvskrgvPlraillsmiisllalllaslnlaapivfnfllaisaliglivwlliilsylrfR 391
                  avi+++++s+ans++y+asR+l++la ++ aP++l++ ++ g+Pl+a++l+++++++a+++++ n + ++vfn+lla+s+l+ ++ w++i+l+++ fR
   EPX73919.1 360 AVIIISVISVANSCTYIASRTLHALALNKNAPSFLTYTDRLGRPLMAMILVLAFGFIAYINEAKNKS-TTVFNWLLAVSGLSSFFSWGSINLCHIIFR 456
                  ***********************************************************66655555.****************************** PP

  AA_permease 392 kalkyqgrsieelgfkaallplgvilvlaaliiillilalyayltvkkgpkdwgaasfaaaylivllfliilvgvklhvknkrp 475
                   a+k+qgrs++ lgf ++++++g++++l ++i+ l++++++ +++v++ p   +aa f++ yl +++++++++g+k++ +++++
   EPX73919.1 457 LAMKKQGRSLDTLGFVSPMGIWGSCIGLGFNILCLIAQFYVSLFPVGGKP---NAAGFFQGYLAAIVVVVFFIGYKIYDRTYIR 537
                  *********************************************99999...9************************999986 PP

>> AA_permease_2  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.7  45.1   4.1e-46   3.7e-42       8     422 ..      84     522 ..      80     525 .. 0.83

  Alignments for each domain:
  == domain 1  score: 144.7 bits;  conditional E-value: 4.1e-46
  AA_permease_2   8 alvigsvigsgifvkn..laasggpa..lilwvwiavligslavllvyaElssalprsgGiyvytkaafgkkvaflsawfnwfayvpvlasilsva 99 
                    +++ig +ig+g fv +  ++a+ggpa  +i + +i+++++    ++++ El+ a p  gG y+y  +++ + ++f ++w +++ y++++++ l+ +
     EPX73919.1  84 MIAIGGAIGTGLFVGSgsSLANGGPAsvIIDYTLIGIMMY--FTVYALGELAVAYPLAGGFYTYCMRFIDPGWGFACGWNYFLNYFVTFPLELTTC 177
                    689************9999999999954555666666665..6999******99****************************************** PP

  AA_permease_2 100 asyllnalgpdlqgntwltyliaiaililvalinirgikesakiqnilgilkillpliiliilglitvdgggfssl......stetdtffpngwpg 189
                    a ++ +++   ++     +++ ++++l l+++in++g+k+++ + +il ++k++   + +iil++i+ +gg  +++        + ++ f +g +g
     EPX73919.1 178 AITFKYWTE--IN----SAVW-ISIFLFLIIFINLFGVKGYGEVEFILSTIKVI-ATTGFIILAIIINCGGVPTDHrgyiggKIISHQPFRHGFKG 265
                    ****99763..32....2344.45567788899********************5.666667788888899999988999999888889******** PP

  AA_permease_2 190 vllgllivlwsfdGfesaanvseevkk..kdvpkaifigllivlvlyll.vniaflgvvpdde..ianlsn.lgsvaalffeavggkvvaiivvil 279
                    + ++++++++sf+G e++   + e+++  k +p a+  ++  ++++y++ + + +l v+pdd+  ++n+sn ++s++ l  + +g k + ++++++
     EPX73919.1 266 FCSVFTTAAFSFSGTEAVGLAAAEAENprKSLPHATRQVFWRIAIFYVVgLLMISLLVSPDDSdlMNNSSNtSVSPFVLAIREAGIKGLPSVFNAV 361
                    ************************7776478*****7776666666665255578889999775567666668999******************** PP

  AA_permease_2 280 ialsllgaintavigssrvlealardgvlPrffakvnkfgspiraiiltaivslillllfllas..saaynfllsvsslgliisyllliigalilr 373
                    i++s++  +n++++++sr+l+ala  +  P+f+  +++ g+p+ a+il++ + +i ++  +  +  ++ +n+ll+vs l++++s++ + ++ +i r
     EPX73919.1 362 IIISVISVANSCTYIASRTLHALALNKNAPSFLTYTDRLGRPLMAMILVLAFGFIAYINEAK-NksTTVFNWLLAVSGLSSFFSWGSINLCHIIFR 456
                    *****************************************************887755544.2589***************************** PP

  AA_permease_2 374 kkrphlkr..........pgkilvaiig....alfllfllvalffppkgpatqssliyt....iilt 422
                      +++++r          +g++    ig    +l+l+  +++  fp  g  +  +++      i+++
     EPX73919.1 457 LAMKKQGRsldtlgfvspMGIWGSC-IGlgfnILCLIAQFYVSLFPVGGKPNAAGFFQGylaaIVVV 522
                    ******9999997777764444222.23123466666666666688666666666543333434444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (577 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       690  (0.0384851); expected 358.6 (0.02)
Passed bias filter:                      297  (0.0165653); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.29s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 4019.76
//
Query:       EPX73920.1  [L=221]
Description: 60S ribosomal protein L10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-41  141.9   0.2    1.5e-41  141.5   0.2    1.1  1  Ribosomal_L16  Ribosomal protein L16p/L10e


Domain annotation for each model (and alignments):
>> Ribosomal_L16  Ribosomal protein L16p/L10e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.5   0.2   8.1e-46   1.5e-41       1     132 []      12     166 ..      12     166 .. 0.97

  Alignments for each domain:
  == domain 1  score: 141.5 bits;  conditional E-value: 8.1e-46
                    HXSSXXBSSSXXSSTSXX.XSXXXXXESX...........EEEEESSXEEEEHHHHHHHHHHHCTCCCCTSXC...EEXXSXXXXEEEEE-..... CS
  Ribosomal_L16   1 pkrkkyrKsrkryirgvs.tkgtklefgd...........ygLvalekgqltaealeaariainrylkkkrgk...klwirvfphhpvtkk..... 76 
                    +k+k+y+Ksr  y+r v+ +k++++++g+           ++Lv++e +q+t+ealeaari  n+yl+k  gk   +l++r++p h+v+++     
     EPX73920.1  12 IKNKPYPKSR--YNRAVPdPKIRIFDLGRkratvdefplcVHLVSNELEQITSEALEAARISSNKYLVKIAGKdafHLRVRAHPYHVVRINkmlsc 105
                    59********..************************************************************************************ PP

                    SS-TTTSSSS....XEEEEEEEEEXSSCEEEEE.TTXXXSHHHHHHHHHHHHTSSSXEEEE CS
  Ribosomal_L16  77 agedRmgkGk....Gkpegwvarvkigqiifei.kagvneeiakealrraasKlpiktkiv 132
                    ag+dR+++G+    Gkp+g varvkigq++++i  ++ n+++a ealrr+++K+p++++i+
     EPX73920.1 106 AGADRLQQGMrhafGKPNGLVARVKIGQVLMSIrTKDSNRATAIEALRRCQYKFPGQQRII 166
                    *********************************74445********************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       309  (0.0172346); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 1531.23
//
Query:       EPX73921.1  [L=1418]
Description: aminoadipate-semialdehyde dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.5e-67  227.3   0.0    3.6e-67  226.8   0.0    1.2  1  AMP-binding    AMP-binding enzyme
    3.7e-66  222.9   0.0      6e-66  222.2   0.0    1.3  1  NAD_binding_4  Male sterility protein
    5.7e-12   45.0   1.1    1.7e-10   40.2   1.1    2.1  1  Condensation   Condensation domain
    4.3e-09   36.6   0.0    1.3e-08   35.0   0.0    1.9  1  PP-binding     Phosphopantetheine attachment site
    1.8e-08   34.2   0.0    3.7e-08   33.1   0.0    1.5  1  Epimerase      NAD dependent epimerase/dehydratase family
    2.7e-06   26.6   0.0    4.8e-06   25.8   0.0    1.4  1  3Beta_HSD      3-beta hydroxysteroid dehydrogenase/isomerase 
    8.1e-05   23.5   0.0     0.0003   21.7   0.0    2.1  1  AMP-binding_C  AMP-binding enzyme C-terminal domain


Domain annotation for each model (and alignments):
>> AMP-binding  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  226.8   0.0   1.4e-70   3.6e-67       1     423 []     284     747 ..     284     747 .. 0.85

  Alignments for each domain:
  == domain 1  score: 226.8 bits;  conditional E-value: 1.4e-70
                  HHHHHHHSTTSEEEEE......CCSTEEEEHHHHHHHHHHHHHHHHHTTSSTT-EEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS-HHHHHHHHHH CS
  AMP-binding   1 leeqaaktpdkvalvd......sgegqtlTYreldervnrlAagLrslGvkkgdrVaillpnspewvvallailkaGavvvplnptltaeelayiled 92 
                  ++ +aak+p++ ++v       ++  +++TYr+ de +n lA++L + G+++gd+V++++++++++vva++++lk Ga+ ++++p++++++    l  
   EPX73921.1 284 FANNAAKFPERECIVVtpsvteNAPTTSYTYRQIDESSNILAHHLVQSGIERGDVVMVYAHRGVDLVVAVMGVLKSGATFSVIDPAYPPARQTVYLGV 381
                  567999***9999988999999999*********************88************************************************** PP

                  HTESEEE...........E..TCTCCCHHHHHHHHSCC-EECEEEEESCCS-HCCHCCCHCCCCSCTTS.....-TSCCCS-BTTSEEEEEEE--SSS CS
  AMP-binding  93 seakvli...........a..tvdselleklleaaakleavklvivldadellkeeelkeeeeseekae.....kpeeeeelkpddlayiiYTSGTTG 172
                  ++++ l+               v+++l  +l+   ++l+ +k  ++ + ++++k ++ ++ +      +     ++++ + + pd++ ++ +TSG+ G
   EPX73921.1 382 AKPRGLVfladagvvsptVldYVEKNL--ELKTFVPSLKLSKNGTL-S-GGCPKGSNTDILS------NvahlkNQQTGVIVGPDSTPTLSFTSGSEG 469
                  *******99876554432122222222..33333333333333222.2.2333333334433......0444555668899***************** PP

                  S-EEEEEEHHHHHHHHHHHHHHHCSCCTTT-EEEESS-TTSCHHHHHHHHHHHHTT-EEEE-TTCGCCHHHHHHHHHHHHT-SEEEEEHHHHHHHHHC CS
  AMP-binding 173 kPKGVmlshrnlvanvaslkletrfklkeddvvlsilplahifglilelllallsGatvvllpkdaaldpklllelieklkvtviagvPrvlealles 270
                   PKGV  +h +l++   +  ++++f+l+e+d++ +   +ah+  +  +++++l+ Ga++++++ ++  +p++l++  +k++vtv++++P++ + l ++
   EPX73921.1 470 VPKGVKGRHFSLAYYFDW--MSHEFNLSENDRFTMLSGIAHDPIQ-RDIFTPLFLGASLIVPTAEDIGTPGQLAHWANKYRVTVTHLTPAMGQLLSAQ 564
                  *************99777..578899*9****************9.***************88777766899*********************99775 PP

                  CCHHCHHHHCCGTT-SEEEEESS-EBHHHHHHHHHHHTC.EEEEEEEEGGGSSECEE..........CHCTTTCTSTTS-BEE-TTEEEEEE-TTTSC CS
  AMP-binding 271 galkaakkakdlsslrlvllggeplspellrffralfge.evlegYGlTEttgvvtv..........lpleedkkklgsvGkplpgvevkivDeetge 357
                    ++      + +sl++++++g+ l +    +++ l ++ +v+++YG TEt   v++            le++k++++ +Gk + +v++ +++ +++ 
   EPX73921.1 565 A-EE------QIPSLHHAFFVGDILTKRDCLRLQVLAINvNVVNMYGTTETQRSVSYfvvparskdsTFLETQKEVIP-AGKGMKNVQLLVINRHDNS 654
                  3.44......79*************************99****************77788999999844455656776.9************877665 PP

                  BE.ETTSEEEEEEEETTS-SEBTT-HHHHHHHEEE..........................TCCEEEEEEEEEEETTSEEEEEEECCCEEEET CS
  AMP-binding 358 pv.pdgeeGellvrgpgvmkgYlkkpeataeafds..........................egrwlrTGDlgrldedGyleivgRkkdliklr 423
                   v + ge+Ge+++r  g+++gYl+++e t+++f +                           +r++r+GDlgr+ + G +e  gR++d++k+r
   EPX73921.1 655 KVcGIGEVGEIYLRAGGLAEGYLGNEEMTSKKFLQswfadpskfvdrtpedatwkkywfgiRDRMYRSGDLGRYLPSGDVECSGRADDQVKIR 747
                  5548******************************889999******************975368***************************96 PP

>> NAD_binding_4  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  222.2   0.0   2.3e-69     6e-66       1     256 [.    1008    1254 ..    1008    1255 .. 0.98

  Alignments for each domain:
  == domain 1  score: 222.2 bits;  conditional E-value: 2.3e-69
                     EE-TTSHHHHHHHHHHHHHS-.TEEEEEE-SSSHHHHHHHHHHHT-SS-HHHHHHHHHTTTEEEEE--TTSGGGG--HHHHHHHHHH--EEEE- CS
  NAD_binding_4    1 lTGaTGFLGkvLlekLLrttpevkiyllvRaksgesaeeRleeelekkelfsallkelaerikvveGDlseprlGLseedlqelaeevdviihs 94  
                     lTGa G+LG ++l++L+++++++k+++l+Ra+s e++++Rl+++   ++++++ +   +  i+vv+GDl+ ++ GL  e++++l+e vdv+ih+
     EPX73921.1 1008 LTGANGYLGVFILRDLMTRNSNIKVIALIRASSPEHGLQRLRDSSIAYGVWDEKW---STSISVVNGDLASENWGLG-EQWNNLCEVVDVVIHN 1097
                     8*****************************************************8...******************8.57************** PP

                     -SS-S.STTSSEEHHHHHHHHHHHHHHHTSSS--.-EEEEEE.GGGTTS-TTT--SSS-H......HHH--EEEETTTCCCHHHHHHHHHHHHH CS
  NAD_binding_4   95 aAtvnfdepykellrvNveGtrevlelakklkklkvllhvST.ayvngeregeveekvyeegekeekldederaklkglpntYeqsKalaEklv 187 
                     +A v++++py++l+ +Nv+Gt   l+l++++k + +l +vS+ +++++e + +++++++++g +   +++    + +gl+++Y qsK++aE+lv
     EPX73921.1 1098 GALVHWVYPYSKLKGPNVMGTITALKLCASGKPK-SLSFVSStSTIDTEYYVNLSNEITSKGGNGIPESDSLSGSADGLQTGYGQSKWVAEYLV 1190
                     *****************************99999.*****999*************************************************** PP

                     HHHHHHH---EEEEEE-EEE--SSST---TTSHHHHHHHHHHHH-EEES-SB---TT--EEEHHHHHHH CS
  NAD_binding_4  188 rearrrsglpvvivRpsiitgesktGwingsdlgirgllgliakgvlpeilgdkeavldlvpvDyvana 256 
                     ++a+ r gl+ vivRp++i+g+sktG+in++d+++r+++g+i+ g +p+i+++    +++vp D+va++
     EPX73921.1 1191 KQAGLR-GLRGVIVRPGYILGDSKTGAINTDDFLVRMMKGSIELGLYPNINNT----VNMVPTDHVARV 1254
                     ****99.*****************************************99999....9*********97 PP

>> Condensation  Condensation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.2   1.1   6.8e-14   1.7e-10     189     456 ..       9     264 ..       3     264 .. 0.75

  Alignments for each domain:
  == domain 1  score: 40.2 bits;  conditional E-value: 6.8e-14
                   HHHHHHHHHHHHHHH......S.---BSS---SS---S-EEEEEE.EE-S-HHHH..HHHHSTSS-HH..HHHHHHHHHHHHHHHT-SEEEEEEEEE CS
  Condensation 189 kdlekeeaYWseqlegelpvlq.Lpkdkarpakrsfkadrlsikl.deeteeklr..klakeqgvtln..dvllaalgllLskytgqddivvgteis 279
                   +++ +  + Wse+l++  ++++ Lp+d+ rp  +++ +   + +l de+ +++++   +a+ +g++ +  +vll+++ +l s++tg +di +gt   
    EPX73921.1   9 EEYAQRLERWSERLKS--QTIShLPTDYSRPVPSRLVEAVSEKSLnDETKTALINiyATAQTKGINATpfNVLLTLFIVLVSRLTGDEDISIGTSSE 103
                   667788888******9..77788**************9999999955555555441145556666554448**********************9643 PP

                   SSTTCSTCHHC--SS-EEEEEEEEE--TT-BHHHHHHHHHHHHHHHHCCTTS-HHHHHHCSS.S..S-SSSS-S-SEEEEESSS-HH...CCCEEEC CS
  Condensation 280 gReseikdiermvGlFvntlPlridvkeaktfselikrvkedllkaephqgypleeLvkdlelq..rkesrspLfdpvfsfenylgq...eseeees 371
                   +   +   i      F     lr+ ++++++f el+k+v e   +  +++ +++ +L+++l+ +  ++ +  + + ++  + n +         +  
    EPX73921.1 104 N---A---I-----PF----VLRTFIQQKESFFELLKKVAELEDTC-SADAVDFTDLINHLNSKlsKQDETRKSLAHIRFY-NAPDApseG-FLSST 182
                   2...1...1.....23....4788899999*********9866666.************9986521333344566665555.888886532.22222 PP

                   CCC.SEEECEE....E.....SSEEEEEEETTSSEEEEEEEETTTS-HHHHHHHHHHHHHHHHHHHHSTTSBCCC-----HHHHHHH CS
  Condensation 372 qls.elklsvssve.aeeeskydlsleasetngkltikieYntslFdeetierflerlkelleqviehpeqklselkllsdaekekL 456
                   +l+ +l++ +s  + aee     l   a++   +l++k+ Yn+ lF++  i+ ++++l +l+  + ++ ++++ +l+l++d +++ L
    EPX73921.1 183 SLDvDLTVLISLKKpAEE--VSSLRSFAFP---DLQLKVIYNQLLFSQYRIDILADQLFQLVRSTSQDINAPIGSLDLMTDSQNRVL 264
                   222233333444443444..4468888888...9***********************************************999866 PP

>> PP-binding  Phosphopantetheine attachment site
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.0   0.0   5.3e-12   1.3e-08       4      66 ..     889     950 ..     886     951 .. 0.85

  Alignments for each domain:
  == domain 1  score: 35.0 bits;  conditional E-value: 5.3e-12
  PP-binding   4 relvaevlgvpleeidpdtdlfdlGlDSllavellaaleeefgveiplsdlfehptlaelaay 66 
                 +++++++   ++  ++  +++fd G++S+la++l+ +l++++ v +pl  +f  pt++ la+ 
  EPX73921.1 889 KDIWQSIVPHAVG-LSKKANFFDVGGHSILATRLIFELRKRYAVNVPLGLIFREPTIEGLARE 950
                 5666666554433.57889*****************************************986 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.1   0.0   1.4e-11   3.7e-08       1     177 [.    1006    1214 ..    1006    1253 .. 0.83

  Alignments for each domain:
  == domain 1  score: 33.1 bits;  conditional E-value: 1.4e-11
                  EEEETTTSHHHHHHHHHHHHCT..SEEEEEES-STTTTCHHCHHC..................EEEE--TT-HH.....HHHHHHHHHT-SEEEE-- CS
   Epimerase    1 ilVtGatGfiGsalvkallekg..yevigldrlssasntarledl..................elveldltdrs.....alerlfkeeqpdavihlA 72  
                  +l+tGa+G++G  +++ l++++  ++vi+l r ss ++  ++  l                  ++v++dl  ++     ++++l++   +d+vih +
  EPX73921.1 1006 VLLTGANGYLGVFILRDLMTRNsnIKVIALIRASSPEHGLQR--LrdssiaygvwdekwstsiSVVNGDLASENwglgeQWNNLCE--VVDVVIHNG 1098
                  699******************98889******9666554332..23479**************99*****9999888889999999..89******8 PP

                  S---HHHHHHSHHHHHHHHTHHHHHHHHHHHHHTCTEEEEEEEGGGGT.............SCSS.SSBSTCSTTS--.--SSHHHHHHHHHHHHHH CS
   Epimerase   73 avggvaassedpadfieknlqgtlnlleaarkagvkrllflsSsevYG.............kdae.qpkeettltgpl.kpnspYaaaKlageklve 154 
                  a  ++    ++   +   n++gt + l+ +   ++k l f+sS+++               k+ + +p+++++ +g+    ++ Y+ +K  +e lv+
  EPX73921.1 1099 ALVHWVYPYSK---LKGPNVMGTITALKLCASGKPKSLSFVSSTSTIDteyyvnlsneitsKGGNgIPESDSL-SGSAdGLQTGYGQSKWVAEYLVK 1191
                  85555443333...3448*************************999999999999999987555557766666.55555****************** PP

                  HHHHHHT-EEEEEEESEEESTT.S CS
   Epimerase  155 ayaaqyglnaiilrlfnlyGpr.n 177 
                  ++   + l+ +i+r+  + G   +
  EPX73921.1 1192 QAGLRG-LRGVIVRPGYILGDSkT 1214
                  998887.********999998852 PP

>> 3Beta_HSD  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   0.0   1.9e-09   4.8e-06       2     213 ..    1008    1243 ..    1007    1259 .. 0.70

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 1.9e-09
   3Beta_HSD    2 vtGgaGFlGralvkeLvrleelkevrvlD.............lrespelleelskvnvkk........viegDvtdk.....dkleealegvdvvih 72  
                  +tG+ G+lG  + + L+ +++  +++v+              l      ++++   +v +        v++gD+ ++     ++ ++ +e vdvvih
  EPX73921.1 1008 LTGANGYLGVFILRDLMTRNS--NIKVIAlirasspehglqrL------RDSSIAYGVWDekwstsisVVNGDLASEnwglgEQWNNLCEVVDVVIH 1096
                  79*****************97..66666644455554444332......44444444433555556669*****99844444589************ PP

   3Beta_HSD   73 laslvdvagkltedeimkvnvkGTrnvleacvkagvrvlvYtSsaevvgp....nslgeeilngdEeleyesl.......hqdaypesKalaEklvl 158 
                    +lv    ++   ++   nv GT + l+ c +   + l ++Ss + +      n  +e+  +g    +   +        q  y +sK +aE lv+
  EPX73921.1 1097 NGALVHW--VYPYSKLKGPNVMGTITALKLCASGKPKSLSFVSSTSTIDTeyyvNLSNEITSKGGNGIPESDSlsgsadgLQTGYGQSKWVAEYLVK 1191
                  *777655..56777899*************************999999652222555666667766665554445556668899************* PP

   3Beta_HSD  159 kaNgrtlknggrlyTcaLRpagiyGegdkllvp...llkqlaklglalfkigdeevls 213 
                  +a  r       l  + +Rp +i G+ ++   +   +l++++k   +l  + + ++++
  EPX73921.1 1192 QAGLRG------LRGVIVRPGYILGDSKTGAINtddFLVRMMKGSIELGLYPNINNTV 1243
                  *98733......667799*******988765541114555555444444444444444 PP

>> AMP-binding_C  AMP-binding enzyme C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   1.2e-07    0.0003       1      76 []     755     851 ..     755     851 .. 0.81

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 1.2e-07
                    HHHHHHHSSTTEEEEEEE-----TTS---EEEEEE--........----...............HHHHHHHHHHHHT-TTTS-SEEEE-S---B-T CS
  AMP-binding_C   1 evEsalvshpaVaeaaVvGvpdevkGealvafVvlkd........gsea...............leeeLkahvrkelgpyavpkkvvfvdelpktr 73 
                    e+   l++hp+V+e      +++ +  +lv ++v++d        g                  + ++++++++++l++yavp  +v ++++p++ 
     EPX73921.1 755 EINTHLSRHPNVRENITLIRRNKDEEPTLVSYIVPQDigkddyasG--TdtddlvvqglrkyrkVIKNIRDYMKTKLPSYAVPTVIVPLNRMPLNP 848
                    6677899999999988776777778899******965554444441..0344577778888899******************************** PP

                    TS- CS
  AMP-binding_C  74 sGK 76 
                    +GK
     EPX73921.1 849 NGK 851
                    **9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1418 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       442  (0.0246528); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.84u 0.31s 00:00:01.14 Elapsed: 00:00:00.47
# Mc/sec: 9111.02
//
Query:       EPX73922.1  [L=699]
Description: conjugation protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        2.8    8.3   9.3       0.68   10.2   0.7    3.4  3  DUF4064   Protein of unknown function (DUF4064)


Domain annotation for each model (and alignments):
>> DUF4064  Protein of unknown function (DUF4064)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.7   3.8e-05      0.68      32      83 ..     257     304 ..     240     310 .. 0.70
   2 ?   -1.5   0.1      0.17   3.1e+03      57      80 ..     370     393 ..     360     395 .. 0.69
   3 ?    1.5   0.3     0.021   3.7e+02      32      76 ..     543     587 ..     532     595 .. 0.60

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 3.8e-05
     DUF4064  32 sgefsqelteeqalsgedasavleflstllivlgvialiaivlgivgalllk 83 
                 s++++ ++   +  sg+d+++ ++++ t+l++l  ++li++v++i+g+++++
  EPX73922.1 257 SQPKQIQY---TVCSGNDTDS-SSSIYTVLTTLKYVVLISLVISIIGLIVVN 304
                 44444444...3455555555.55666888899999999********99998 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.17
     DUF4064  57 lstllivlgvialiaivlgivgal 80 
                 +s  ++ +++i+l+ ++++++++l
  EPX73922.1 370 ISYIFYPPATILLFVGIASLCSCL 393
                 455556667777777777777665 PP

  == domain 3  score: 1.5 bits;  conditional E-value: 0.021
     DUF4064  32 sgefsqeltee..qalsgedasavleflstllivlgvialiaivlgi 76 
                 ++ fsq+ ++   ++l+  +++ ++e  ++ll++++++a+ a  +g+
  EPX73922.1 543 NSTFSQTTSNGltKILNSLESTVISETKQSLLFIFLWLAVCA--FGL 587
                 444444444446566666666666666666666666655544..344 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (699 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       930  (0.0518713); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.28s 00:00:00.91 Elapsed: 00:00:00.45
# Mc/sec: 4669.08
//
Query:       EPX73923.1  [L=539]
Description: GMP synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.7e-39  133.8   0.0      3e-39  133.0   0.0    1.4  1  GMP_synt_C       GMP synthase C terminal domain
    3.1e-37  128.2   0.0    6.2e-37  127.2   0.0    1.5  1  GATase           Glutamine amidotransferase class-I
      2e-06   27.1   0.0    0.00026   20.2   0.0    2.2  2  NAD_synthase     NAD synthase
    2.5e-06   27.4   0.0    6.6e-06   26.0   0.0    1.7  1  Peptidase_C26    Peptidase C26
    0.00071   19.0   0.1     0.0011   18.3   0.1    1.2  1  Arginosuc_synth  Arginosuccinate synthase
    0.00092   18.8   0.0      0.016   14.7   0.0    2.1  2  QueC             Queuosine biosynthesis protein QueC
     0.0016   17.3   0.0     0.0033   16.3   0.0    1.5  1  tRNA_Me_trans    tRNA methyl transferase
     0.0034   17.5   0.0     0.0061   16.6   0.0    1.4  1  PAPS_reduct      Phosphoadenosine phosphosulfate reductase fa
     0.0072   16.3   0.0      0.016   15.2   0.0    1.5  1  MetJ             Met Apo-repressor, MetJ
  ------ inclusion threshold ------
       0.04   13.7   0.0      0.069   12.9   0.0    1.4  1  ATP_bind_3       PP-loop family
      0.068   13.3   0.1       0.12   12.4   0.1    1.4  1  sCache_like      Single Cache-like


Domain annotation for each model (and alignments):
>> GMP_synt_C  GMP synthase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.0   0.0   1.9e-42     3e-39       2      92 .]     447     538 ..     446     538 .. 0.98

  Alignments for each domain:
  == domain 1  score: 133.0 bits;  conditional E-value: 1.9e-42
                 CCCTTT-GGGSSEEEEEEEEEEE----------EEEEEEEEE---------B--.--HHHHHHHHHHHHHHSTT---EEEE---TTTS-S-- CS
  GMP_synt_C   2 elkkaglykkiwQafavllpvksvGvmgdkRtyeyvvalRaveseDamtadvae.lpyevLekissrivnevkgvnrvvyditskPpatiEw 92 
                 e++++g+y+ki+Qafa+llpvk+vGvmgd+Rt+e+v+alRa++++D+mtad+++ + +++L+ +ssri+nev gvnrv+ydi+skPpat+E+
  EPX73923.1 447 EIRNHGYYDKISQAFAALLPVKAVGVMGDQRTHEQVIALRAITTSDFMTADWFDgFSVKFLKLVSSRICNEVAGVNRVLYDISSKPPATVEM 538
                 899*************************************************988***********************************96 PP

>> GATase  Glutamine amidotransferase class-I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.2   0.0   3.8e-40   6.2e-37       2     188 ..      23     207 ..      22     209 .. 0.92

  Alignments for each domain:
  == domain 1  score: 127.2 bits;  conditional E-value: 3.8e-40
                 EEESSTSTHHHHHHHHHHTT-EEEEEETTSHHHHHHHTHHSTSEEEEEEESSCTTTTTHHHHHHHHCTSTS-EEEETHHHHHHHHHTTTEEEEEECEEE CS
      GATase   2 liDnydsvtenlvhalvelgvkvevvpidasaeeilellknpdgilvsgGpgspgvegkieaikearenkiPiLGICLGmQllaiefgrkvvkekekeh 100
                 ++D+++++++ ++++l+el+v+ e++p+++++ e      +p+g+++sgGp s++ eg++ +   ++e ++PiLGIC+GmQ la   gr v    e+e+
  EPX73923.1  23 ILDFGSQYSHLIARRLRELHVYAEMLPCTQKIAEL---PFKPKGVIFSGGPYSVYDEGAPHVDPAVFELEVPILGICYGMQELAWLNGRGVSAGIEREY 118
                 79***************************998888...589***************************************************9888888 PP

                 EEEEEEEEETTT.....CGGTTTTSEEEEEEEEEEEEESGCHHHTTEEEEEEEETTEEEEEEEEETTTEEEESSBTTSTTSTTHHHHHHHHHH CS
      GATase 101 hggtmrlgddet.....allyglknevierhrHryevnpkelepaglevtakseddeelmeiiekknpfvgvQFHPEststpegpellfnfli 188
                   +  +++ +++     + ++ +++e++++++H++++n    +p+g+e +++++++  ++ i + ++ ++g+QFHPE+t+tp g +l++nf +
  EPX73923.1 119 GPAMVNITGESKsevfqKFFESMPKEFEVWMSHGDKLNA---LPTGFESIGQTKNS-PYAVIAHSSKAIFGIQFHPEVTHTPLGLQLIKNFAL 207
                 88888888877788998999******************9...***********776.56666666666**********************976 PP

>> NAD_synthase  NAD synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.0   1.6e-07   0.00026      20      87 ..     238     305 ..     218     355 .. 0.68
   2 !    4.6   0.0     0.009        15     148     177 ..     386     415 ..     378     422 .. 0.91

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 1.6e-07
                   EEEEEE-SSHHHHHHHHHHHHHHTCGEEEEEE--SSSTTHHHHH.HHHHHHHHHTSEEEE---HHHHHH CS
  NAD_synthase  20 gvvlGlSGGvDSslvaalavkalgkenvlalllPssvsseedve.dalalaenlgievktidikpivra 87 
                    v+  +SGGvDS+++a++ ++a+  ++++a+++ +     +++e    +l e+lgi+ + +d ++    
    EPX73923.1 238 HVIGAVSGGVDSTVAAKVLKEAI-GDRFHAIMVDNGLLRLNEAEiVRENLKEHLGIRLTIVDASDEFLQ 305
                   445559*****************.689****99855554444441456889999999999987765443 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.009
                   BETTTTS-HHHHHHHHHHTT--HHHHCS-- CS
  NAD_synthase 148 lapiaellKtevkeLakelnvPervlkkpP 177
                   ++p+ el+K ev+ L + l++ + ++ ++P
    EPX73923.1 386 IEPLRELFKDEVRSLGELLGIERTLVWRHP 415
                   78*******************999998887 PP

>> Peptidase_C26  Peptidase C26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.0   4.1e-09   6.6e-06     101     216 .]      85     191 ..      79     191 .. 0.74

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 4.1e-09
  Peptidase_C26 101 alergvPilgiCrGlqllnvalGGtlyqdieeqsgltdhreheqsaashavkvekgsllaellg..seeievnslHhqaikelaeelrveAvaeDg 194
                    + e +vPilgiC G+q+l+   G  +   ie++        +  ++ + +    k+ +++++++   +e+ev   H   ++ l ++++ + +++  
     EPX73923.1  85 VFELEVPILGICYGMQELAWLNGRGVSAGIEREY------GPAMVNITGES---KSEVFQKFFEsmPKEFEVWMSHGDKLNALPTGFESIGQTKNS 171
                    56789*************8888888888888522......22233333333...34444444432237***********************99988 PP

  Peptidase_C26 195 viEaieseeakafvlgvQwHPE 216
                        i + +  + ++g+Q+HPE
     EPX73923.1 172 PYAVIAHSS--KAIFGIQFHPE 191
                    776666655..48********9 PP

>> Arginosuc_synth  Arginosuccinate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.1   6.8e-07    0.0011       3      66 ..     242     306 ..     240     309 .. 0.90

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 6.8e-07
  Arginosuc_synth   3 aysGGlDtsviikllkeklgeeviavavdvGqee.edldevkekalklgavksvvvDakeefved 66 
                      a sGG+D +v+ k+lke +g+   a++vd G  + ++ + v+e+ ++   ++ ++vDa++ef ++
       EPX73923.1 242 AVSGGVDSTVAAKVLKEAIGDRFHAIMVDNGLLRlNEAEIVRENLKEHLGIRLTIVDASDEFLQK 306
                      78*****************************76437888999999999999***********875 PP

>> QueC  Queuosine biosynthesis protein QueC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   9.8e-06     0.016       3      70 ..     240     310 ..     238     336 .. 0.79
   2 ?    1.7   0.0     0.092   1.5e+02     141     178 ..     369     409 ..     346     413 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 9.8e-06
                 EEE--SSHHHHHHHHHHHHH-.SEEEEEEEESS-TTSHHHHHH.HHHHHHT--.-EEEEE-G..GGGGGSCG CS
        QueC   3 vvllSGGlDSttvlalakkeg.kevealtfdYgqrhkkeleaa.kkiakelgveehkildld..llkelggs 70 
                 +  +SGG+DSt+++ + k+++ ++ +a+ +d g  + +e e++ +++ ++lg+ + +i+d +  +l++l+g 
  EPX73923.1 240 IGAVSGGVDSTVAAKVLKEAIgDRFHAIMVDNGLLRLNEAEIVrENLKEHLGI-RLTIVDASdeFLQKLSGV 310
                 5568*********9999887449**********988888876516789999**.999999853366666655 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.092
                 HHHHHHH...HTS--EEE-TTTT--HHHHHHHHHHTTHHHH CS
        QueC 141 nkalnlg...edkkieieaPlidlsKaeivklgkelgvple 178
                 ++  n+g   ed k+++  Pl +l K e+  lg+ lg+++ 
  EPX73923.1 369 KTHHNVGgllEDMKLKLIEPLRELFKDEVRSLGELLGIERT 409
                 33344446668999********************9998765 PP

>> tRNA_Me_trans  tRNA methyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0     2e-06    0.0033       2      75 ..     238     304 ..     237     310 .. 0.60

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 2e-06
  tRNA_Me_trans   2 kvvvalSgGVDSsvaaallkeqgyevigvflklweeedeegkeccaeedlkdaervaeklgiplevvdfekeyk 75 
                    +v+ a+SgGVDS+vaa +lke+  +    ++        ++ +          e+  e+lgi+l++vd ++e+ 
     EPX73923.1 238 HVIGAVSGGVDSTVAAKVLKEAIGDRFHAIMVDNGLLRLNE-AEIV------RENLKEHLGIRLTIVDASDEFL 304
                    7999****************997655444443222211111.1111......1234456666666666666665 PP

>> PAPS_reduct  Phosphoadenosine phosphosulfate reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   3.7e-06    0.0061       3      89 ..     240     339 ..     238     349 .. 0.87

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 3.7e-06
                  EEE--SSCTCHHHHHHHHHHCTT.HEEEEEE-STB.-HHHHHHHHHHHHHTT-EEEEEE-SCHHHHHHHHHH-S-THHHC...........HHHHHHT CS
  PAPS_reduct   3 vvsvsgGkdslVllhLalkafkp.vpvvfvdtghe.fpetiefvdeleeryglrlkvyepeeevaekinaekhgsslyee...........aaeriaK 87 
                  + +vsgG ds+V  + + +a  + ++ + vd g    +e    +++l+e++g+rl +++  +e+ +k+   + ++++ +            +aeri+K
   EPX73923.1 240 IGAVSGGVDSTVAAKVLKEAIGDrFHAIMVDNGLLrLNEAEIVRENLKEHLGIRLTIVDASDEFLQKLSGVSDPEKKRKIigntfihvferEAERIMK 337
                  5589*****************99558******97526888889999***********************99999998555888888899889999999 PP

                  HH CS
  PAPS_reduct  88 ve 89 
                  + 
   EPX73923.1 338 TT 339
                  86 PP

>> MetJ  Met Apo-repressor, MetJ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   9.6e-06     0.016       6      64 ..     444     502 ..     439     508 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 9.6e-06
        MetJ   6 yispyaehgkkseqvkkvtvsiplkvlkvltdertrrqvnnlrhatnsellceaflhaf 64 
                 +i+   +hg   +  +  +  +p+k + v+ d+rt  qv  lr  t s+++   ++  f
  EPX73923.1 444 FITEIRNHGYYDKISQAFAALLPVKAVGVMGDQRTHEQVIALRAITTSDFMTADWFDGF 502
                 667777899988888999999****************************9988777666 PP

>> ATP_bind_3  PP-loop family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   4.2e-05     0.069       2      67 ..     239     300 ..     238     338 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 4.2e-05
                 EEEE--SCHHHHHHHHHHHHHCTTTTTEEEEEEEE-SSSTCHHHHHHHH.HHHHHHTT-EEEEEE-- CS
  ATP_bind_3   2 vlvAvSgGlDSmaLllllaklkkklgiklvaihvdhglreeskeeaelv.kelckklnikleiekvd 67 
                 v+ AvSgG+DS++  ++l++     g ++ ai+vd gl      eae+v ++l ++l+i+l+i +++
  EPX73923.1 239 VIGAVSGGVDSTVAAKVLKEAI---GDRFHAIMVDNGLLRLN--EAEIVrENLKEHLGIRLTIVDAS 300
                 5669**********99999984...45999*****9986543..34444145556667777766555 PP

>> sCache_like  Single Cache-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   7.5e-05      0.12      17      80 ..     264     327 ..     248     347 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 7.5e-05
                  HHHHHS-GGG-SSHHHHHHHHHHHHHHT-EEEEEETTS-EEEETTS...S---HHHHHHHHTT- CS
  sCache_like  17 llasllenenlkaaenkkvleeasekldaritivdadgkvlydtgqeieeaeseavikellske 80 
                  + a++++n  l  +e + v e+++e+l+ r tivda ++ l +  + ++ ++++++i ++  + 
   EPX73923.1 264 FHAIMVDNGLLRLNEAEIVRENLKEHLGIRLTIVDASDEFLQKLSGVSDPEKKRKIIGNTFIHV 327
                  668999999999999999*********************9999999777777788887765444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (539 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       479  (0.0267165); expected 358.6 (0.02)
Passed bias filter:                      465  (0.0259356); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.62u 0.26s 00:00:00.88 Elapsed: 00:00:00.45
# Mc/sec: 3581.54
//
Query:       EPX73924.1  [L=272]
Description: PI31 proteasome regulator [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.8e-13   49.1   5.7    9.8e-13   49.1   5.7    2.4  2  PI31_Prot_C  PI31 proteasome regulator


Domain annotation for each model (and alignments):
>> PI31_Prot_C  PI31 proteasome regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.1   5.7   5.5e-17   9.8e-13       1      78 []     165     226 ..     165     226 .. 0.79
   2 ?   -1.7   1.1      0.38   6.9e+03      50      61 ..     245     251 ..     229     268 .. 0.38

  Alignments for each domain:
  == domain 1  score: 49.1 bits;  conditional E-value: 5.5e-17
  PI31_Prot_C   1 iGdsDLyPpglgphdPLrgpgglpspgggdggggGmhvgpdhPlfkrsengpggrggpdgfelppavpPGARfDPvgp 78 
                  iG +DLyP+g+g   P            ++g++gGm+++ +hP+f+ +++++ ++++  ++ + p vpPGAR+DP+ p
   EPX73924.1 165 IGADDLYPAGVG--AP------------SSGNNGGMYPTLNHPIFHPERRPNVNDEE--EPPILPYVPPGARYDPTSP 226
                  8***********..67............23458************666666644443..335778**********987 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.38
  PI31_Prot_C  50 ngpggrggpdgf 61 
                  + pg+     gf
   EPX73924.1 245 TRPGQ-----GF 251
                  22222.....22 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       232  (0.0129399); expected 358.6 (0.02)
Passed bias filter:                      204  (0.0113782); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.28s 00:00:00.71 Elapsed: 00:00:00.44
# Mc/sec: 1870.28
//
Query:       EPX73925.1  [L=107]
Description: glutaredoxin Grx2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.9e-18   64.1   0.0    1.3e-17   63.8   0.0    1.1  1  Glutaredoxin   Glutaredoxin
     0.0032   17.9   0.2     0.0083   16.6   0.2    1.7  1  Thioredoxin_2  Thioredoxin-like domain
  ------ inclusion threshold ------
      0.014   15.8   0.0      0.016   15.6   0.0    1.3  1  DUF836         Glutaredoxin-like domain (DUF836)
      0.015   15.8   0.0      0.021   15.3   0.0    1.2  1  DUF1660        Prophage protein (DUF1660)
      0.018   14.8   0.3      0.076   12.8   0.1    1.8  2  DSBA           DSBA-like thioredoxin domain
      0.064   13.7   0.0      0.082   13.3   0.0    1.2  1  GST_N_3        Glutathione S-transferase, N-terminal domain


Domain annotation for each model (and alignments):
>> Glutaredoxin  Glutaredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.8   0.0   4.2e-21   1.3e-17       1      60 []      18      80 ..      18      80 .. 0.97

  Alignments for each domain:
  == domain 1  score: 63.8 bits;  conditional E-value: 4.2e-21
                  EEEEESTSSHHHHHHHHHHHHTTGGEEEEEGCCSH...HHHHHHHHHHTSSSSSEEEETTEEE CS
  Glutaredoxin  1 vvlftkptCpyCkkakrlLkelgvkfeeidvdkde...eireelkelsgvrtvPqvfidgkhv 60
                  v++f+k++CpyC++ak++L+++ ++f+ +++d+ +   ei+++l+e++g+ tvP +f++++++
    EPX73925.1 18 VTVFSKSYCPYCSAAKKTLTDYTAPFKSYELDQLDsgsEIQAYLMEKTGQGTVPSIFFKNEFI 80
                  89*******************************98899**********************997 PP

>> Thioredoxin_2  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.2   2.8e-06    0.0083       9      86 ..      18      75 ..      14      91 .. 0.72

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 2.8e-06
  Thioredoxin_2  9 lvvftdpdCpyCkklkkelkelddvtvrvllfplkpsfepkavaiwcakekkkafkdieenvelarkygvrgtPtivf 86
                   ++vf+++ CpyC + kk+l ++               + +k+ ++++ ++ +      e +  l++k g   +P+i+f
     EPX73925.1 18 VTVFSKSYCPYCSAAKKTLTDY--------------TAPFKSYELDQLDSGS------EIQAYLMEKTGQGTVPSIFF 75
                   78***************99999..............2445555555555554......34445666666666666665 PP

>> DUF836  Glutaredoxin-like domain (DUF836)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.6   0.0   5.4e-06     0.016       2      37 ..      18      54 ..      17      98 .. 0.74

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 5.4e-06
                EEEEE-TT-HHHHHHHHHHHHHCCCTT.EEEEEEETT CS
      DUF836  2 ltLyskpgChlCeqakekLkelkleeg.leleviDIa 37
                +t +sk +C+ C  ak+ L +     + +el++ D  
  EPX73925.1 18 VTVFSKSYCPYCSAAKKTLTDYTAPFKsYELDQLDSG 54
                799*****************95444444888888755 PP

>> DUF1660  Prophage protein (DUF1660)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.3   0.0     7e-06     0.021       4      50 ..       4      51 ..       1      58 [. 0.89

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 7e-06
     DUF1660  4 lCKLfgHKwd.enpaadseelyCeRCeivkekvkclekklnrsdLdes 50
                l KLf  K    np++   + yC  C   k+++  ++  ++ ++Ld+ 
  EPX73925.1  4 LTKLFVEKAIaSNPVTVFSKSYCPYCSAAKKTLTDYTAPFKSYELDQL 51
                78*****98879**************9999999************985 PP

>> DSBA  DSBA-like thioredoxin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   2.5e-05     0.076       2      25 ..      18      41 ..      17      60 .. 0.88
   2 ?    0.2   0.0      0.18   5.5e+02     168     190 ..      70      91 ..      54      94 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2.5e-05
                EEEEEBTTBHHHHHHHHHHHHHHH CS
        DSBA  2 vdeffDvlCPyCylgkerleklaa 25
                v +f+  +CPyC ++k+ l+ + a
  EPX73925.1 18 VTVFSKSYCPYCSAAKKTLTDYTA 41
                789****************99876 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.18
                 SSEEEETTCEEEESSSSHHHHHH CS
        DSBA 168 vPtvvvdgkrmvfGadrldtlad 190
                 vP +++ ++ ++ G+++l +l++
  EPX73925.1  70 VPSIFFKNE-FIGGNSDLTKLRN 91 
                 8999****9.999*999998875 PP

>> GST_N_3  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   2.7e-05     0.082       3      50 ..      22      73 ..      20      87 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 2.7e-05
                S-TTSHHHHHHHHHHHHHT--EEEE---...TTTTHHHH.HHH-TT--SSEE CS
     GST_N_3  3 gfpaSpyarrvrlaLnekglpvevvevt...pgehdeel.laknplgkvPvL 50
                +  ++py+  ++ +L+    p++ +e++    g+  +++ ++k+++g+vP +
  EPX73925.1 22 SKSYCPYCSAAKKTLTDYTAPFKSYELDqldSGSEIQAYlMEKTGQGTVPSI 73
                6779****************977666653337778777768999******97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       396  (0.0220871); expected 358.6 (0.02)
Passed bias filter:                      333  (0.0185733); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.41
# Mc/sec: 775.85
//
Query:       EPX73926.1  [L=175]
Description: NatA N-acetyltransferase complex catalytic subunit Ard1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.1e-11   42.6   0.0    8.1e-11   42.2   0.0    1.2  1  Acetyltransf_1   Acetyltransferase (GNAT) family
    2.9e-07   30.5   0.1    3.5e-07   30.2   0.1    1.1  1  Acetyltransf_10  Acetyltransferase (GNAT) domain
    0.00039   20.8   0.0    0.00062   20.1   0.0    1.3  1  Acetyltransf_7   Acetyltransferase (GNAT) domain
     0.0017   18.3   0.0     0.0031   17.5   0.0    1.4  1  FR47             FR47-like protein
     0.0039   16.7   0.8     0.0068   15.9   0.2    1.6  2  Acetyltransf_15  Putative acetyl-transferase


Domain annotation for each model (and alignments):
>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.2   0.0   2.2e-14   8.1e-11      35     113 ..      43     124 ..       8     129 .. 0.82

  Alignments for each domain:
  == domain 1  score: 42.2 bits;  conditional E-value: 2.2e-14
                     EEEEEETTEEEEEEEEEEEET..TSTTEEEEEEEEESGGGTTSSHHHHHHHHHHHHHHHT.TESEEEEEEETTEHHHHHHHH CS
  Acetyltransf_1  35 llvaeedgeliGfisllkipd..ekggvayieslaVspeyrgkGlGsaLlealeeraree.gikkivlaveedndaairlYe 113
                     +++    g+++G++ +++  +     +++++ sl V ++yr  Gl+++L+ +  + + e  g+k++ l+v+++n+aa +lY+
      EPX73926.1  43 YVATNPKGRIVGYVLAKMEEEpkDGIPHGHVTSLSVMRSYRQLGLAKRLMVQSQRAMVEVyGAKYMSLHVRKSNRAALHLYR 124
                     33345559******9999999997788******************************************************5 PP

>> Acetyltransf_10  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   0.1   9.6e-11   3.5e-07      32     126 ..      42     151 ..      18     152 .. 0.80

  Alignments for each domain:
  == domain 1  score: 30.2 bits;  conditional E-value: 9.6e-11
  Acetyltransf_10  32 lllvaeeggkivGviel.rdgs........hisllfVdpeyrgqGigkaLleaveeeaekdgikl..eltvnasp.yavpfYe.klGFkav..g 110
                       +++ + +g+ivG++   ++++        h++ l V ++yr+ G++k+L+ + ++++ +  +++  +l+v++s+ +a  +Y+ +l F +   +
       EPX73926.1  42 SYVATNPKGRIVGYVLAkMEEEpkdgiphgHVTSLSVMRSYRQLGLAKRLMVQSQRAMVEVYGAKymSLHVRKSNrAALHLYRdSLTFDVQgiE 135
                      566777789******553443367999******************************656666666*********9******745777776667 PP

  Acetyltransf_10 111 eeqeenGirfvpMeke 126
                      ++ +++G   + M+k+
       EPX73926.1 136 SKYYADGEDAYAMHKD 151
                      8888888888888776 PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   1.7e-07   0.00062       6      70 ..      43     124 ..      27     125 .. 0.71

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 1.7e-07
                     EEEEET.TEEEEEEEEEEES........TCTEEEEE-GGGTTSSHHHHHHHH..TT....SEEEEE.EEEE..THHHHHHHHH CS
  Acetyltransf_7   6 fVaedd.gkivGfialslld........aeitrlaVdpeyrgkGiGraLlea..ae....kgiile.qlel..naekaikfYe 70 
                     +Va +  g+ivG++ ++ ++        ++ t l V  +yr  G++++L+    ++     g + +  l++  ++++a+++Y+
      EPX73926.1  43 YVATNPkGRIVGYVLAKMEEepkdgiphGHVTSLSVMRSYRQLGLAKRLMVQsqRAmvevYGAK-YmSLHVrkSNRAALHLYR 124
                     4665447999***99999999998876555555*****************75331134454422.223333324448999997 PP

>> FR47  FR47-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   8.6e-07    0.0031      21      73 ..      70     124 ..      66     139 .. 0.84

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 8.6e-07
                 TSSEEEEEE-GGG-SSSHHHHHHHHHHHHHHH.S-.S-EEEEEETT-HHHHHHHH CS
        FR47  21 ggelgalqvlpehrrrGlgsrlvkalakeiae.rg.ktvllvvvasNtpsirlye 73 
                  g + +l v  + r+ Gl++rl  +  ++++e  g k ++l+v+ sN ++ +ly 
  EPX73926.1  70 HGHVTSLSVMRSYRQLGLAKRLMVQSQRAMVEvYGaKYMSLHVRKSNRAALHLYR 124
                 68889999**************9999999999866156789*************6 PP

>> Acetyltransf_15  Putative acetyl-transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0      0.51   1.8e+03     124     147 ..      26      49 ..      18      54 .. 0.79
   2 !   15.9   0.2   1.9e-06    0.0068      77     120 ..      75     115 ..      71     130 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.51
  Acetyltransf_15 124 MnisfalYyslgFrkglfvksgPe 147
                       ++ ++lY +      ++v + P+
       EPX73926.1  26 YQLKYYLYHAISWPMLSYVATNPK 49 
                      567899999999999999998886 PP

  == domain 2  score: 15.9 bits;  conditional E-value: 1.9e-06
  Acetyltransf_15  77 tlyvsekyrgkGlakklLeeslkelkknYkvdnelllaLHlnpk 120
                      +l v   yr+ Glak+l+ +s ++++  Y ++   +++LH+  +
       EPX73926.1  75 SLSVMRSYRQLGLAKRLMVQSQRAMVEVYGAK---YMSLHVRKS 115
                      5778999*******************999988...*****9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       323  (0.0180155); expected 358.6 (0.02)
Passed bias filter:                      276  (0.0153941); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 1272.33
//
Query:       EPX73927.1  [L=182]
Description: meiotic cohesin complex associated protein Moa1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
       0.08   12.0   0.0       0.11   11.5   0.0    1.2  1  Serpulina_VSP  Serpulina hyodysenteriae variable surface prot


Domain annotation for each model (and alignments):
>> Serpulina_VSP  Serpulina hyodysenteriae variable surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   6.2e-06      0.11     168     281 ..       9     154 ..       4     173 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 6.2e-06
  Serpulina_VSP 168 ryYtgidilnqiRlylkYGmaklkna...kdks...............................keltassvgfdlRlyfkaeveevtiePflrva 229
                    + Y   d++++++++ kYG+++++n    +  +                               k+ +++     +Rly+++  +++ +eP +  +
     EPX73927.1   9 QLYVSLDAFRRVKVNNKYGKQQVRNPpkvE--KrqplqdktnqielpsknkgypdilpdeisfiKTPERK---SPTRLYQEICFRDIPLEPDFCKT 99 
                    6799*******************9985432..2568999999***********99999988554444444...479***************99888 PP

  Serpulina_VSP 230 yd...talatsigknlkvtakkldpieekkggagassyaqadssletesydkepy 281
                    ++   t+  ++ +k lk+ ++  +++ee+ +++  +++ q++s++e +++++  +
     EPX73927.1 100 FQplaTSTPKKKEKGLKSLQARSQKYEEESEFDELATWFQSASNFELNFSEISSQ 154
                    8633355555778888888889999999999999999999999996666555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       643  (0.0358637); expected 358.6 (0.02)
Passed bias filter:                      347  (0.0193541); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.46
# Mc/sec: 1196.72
//
Query:       EPX73928.1  [L=187]
Description: retromer complex subunit Vps29 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      2e-15   57.4   0.0    2.4e-15   57.1   0.0    1.1  1  Metallophos_2  Calcineurin-like phosphoesterase superfamily d
  ------ inclusion threshold ------
      0.063   13.8   0.0       0.15   12.5   0.0    1.8  1  Metallophos    Calcineurin-like phosphoesterase
      0.063   13.0   0.0       0.11   12.2   0.0    1.3  1  TTC5_OB        Tetratricopeptide repeat protein 5 OB fold dom


Domain annotation for each model (and alignments):
>> Metallophos_2  Calcineurin-like phosphoesterase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.1   0.0   3.9e-19   2.4e-15       1     162 [.       1     159 [.       1     162 [. 0.86

  Alignments for each domain:
  == domain 1  score: 57.1 bits;  conditional E-value: 3.9e-19
  Metallophos_2   1 MklaiiSDlH...snldaleavlealkevgvdaiihaGDleeeepevleellela.pvlaVrGNnDeevveedvlreaaelgtdlpeeaelelage 92 
                    M +++i D+H   ++ ++ e++ + l   ++++ii++G+l  ++p++ + l+ ++ +++ VrG  D              ++ + p + +l+l+ +
     EPX73928.1   1 MLVLVIGDFHipnRSPKLSEKFRQLLIPGKINQIICLGNL--TSPSIYDYLKHVCaDLKLVRGAYD--------------IDSKSPIAGKLTLGSF 80 
                    99*********99999999999999999***********9..***9999999999***********..............7888888888899999 PP

  Metallophos_2  93 kvlliHgdpl...gvkdalaellkeaeegsdvvvcGHtHvpevekeggvlvvnPGsvgeprdgdpe........tyaildt 162
                    kv+ + g+ l     ++al+ l+++  +++d+v++G tH+ ++++ +++ +vnPGs++++ + +++        +++++d+
     EPX73928.1  81 KVAYTSGHLLvpqDSPEALSILARD--MDADIVLYGNTHKFSAFELDNCFFVNPGSATGAPTVSTAnddtkitpSFVLMDV 159
                    9999999955777778888888888..8888***************************99443333444456667777776 PP

>> Metallophos  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   2.6e-05      0.15       2      50 ..       2      47 ..       1     174 [. 0.80

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 2.6e-05
                 EEEEEESBTBTTCCTHHHHHHHHHHHHHHHTTESEEEEESTSSSSSHHH CS
  Metallophos  2 rilvigDlHlalgggqlddllkllddllreekpdlvllaGDlvdrgdle 50
                  +lvigD H    + + ++l + +++ll + k++ ++++G l+  + ++
   EPX73928.1  2 LVLVIGDFH---IPNRSPKLSEKFRQLLIPGKINQIICLGNLTSPSIYD 47
                 59*******...8999***********9999*********998887333 PP

>> TTC5_OB  Tetratricopeptide repeat protein 5 OB fold domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   1.9e-05      0.11      25      62 ..     141     178 ..     130     181 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.9e-05
     TTC5_OB  25 vtslaseeevplalllvDskgtvlvvtvYnilkgkgvv 62 
                 v + ++++++   ++l+D +g vl++ vY i  g+  v
  EPX73928.1 141 VSTANDDTKITPSFVLMDVQGAVLILYVYRIFDGEVRV 178
                 66778899***********************9887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       246  (0.0137208); expected 358.6 (0.02)
Passed bias filter:                      241  (0.0134419); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1356.63
//
Query:       EPX73929.1  [L=362]
Description: ethanolamine-phosphate cytidylyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.3e-29  100.5   0.0    2.3e-22   79.7   0.0    2.2  2  CTP_transf_like  Cytidylyltransferase-like


Domain annotation for each model (and alignments):
>> CTP_transf_like  Cytidylyltransferase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.7   0.0   1.3e-26   2.3e-22       1     140 [.       8     131 ..       8     134 .. 0.96
   2 !   18.9   0.0   7.6e-08    0.0014       2     110 ..     203     322 ..     202     359 .. 0.70

  Alignments for each domain:
  == domain 1  score: 79.7 bits;  conditional E-value: 1.3e-26
                      EEEE--TT--HHHHHHHHHHHHHSSESEEEEEESSTHCSST-.SCSSTHHHHHHHHHHHTTCTTEEEEEEESEHHHHHHHTTTTEEEEEEEHHH CS
  CTP_transf_like   1 lagGtFDpiHlGHlrlleqakklleedlivgvpsdeppkkkk.kplasaeeRlemlelakevdevisvdpweltrevlkklkpdklylvigadv 93 
                      +++G+ D++H+GH + + qak+l+++ l+vgv+sde+   +k +p+++++eR+     +++v+ev++ +p++ +  +++k++++  ++v+g+d 
       EPX73929.1   8 WFDGCLDFFHYGHTNAILQAKQLGDQ-LVVGVHSDEEITLNKgPPVQDLSERCLAAITCRWVNEVVPYAPYVFDLAWMRKYNCQ--FVVHGDDI 98 
                      599***********************.**************77*****************************************..*******9 PP

                      HHHHHCHHHHHHHHHHHHHEEEEEEHTTCEEEEEEECCTTTCSHHHH CS
  CTP_transf_like  94 ledfsewkeleeilgnvklvvvsrpekqanvllkaekrtngiSstki 140
                       +d+    e ++++++ k + +          +++ krt giS+t++
       EPX73929.1  99 STDA----EGNDCYRHAKAANQ----------YLEVKRTDGISTTEL 131
                      8888....*************9..........999**********97 PP

  == domain 2  score: 18.9 bits;  conditional E-value: 7.6e-08
                      EEE--TT--HHHHHHHHHHHHHSSES.EEEEEESSTHCSST-SCSSTHHHHHHHHHHHTTCTTEE....EEEEESEHH........HHHHHTTT CS
  CTP_transf_like   2 agGtFDpiHlGHlrlleqakklleed.livgvpsdeppkkkkkplasaeeRlemlelakevdevi....svdpweltr........evlkklkp 82 
                      ++G   +++  H++ l+  ++ + +  ++vg+  d++     kp+ ++ eR+ +l ++k+v+ vi    sv+ w++++         + +   p
       EPX73929.1 203 LDGDWSLFTGNHMKALKACAETFPTLpIVVGIFADDKCTE--KPVLNLLERTLNLLQCKYVSAVIidppSVKNWDMVKflktkfgdLIENVSYP 294
                      67888899999*************9777777777776664..6********************8833333445555557777666444444445 PP

                      TEEEEEEEHHHHHHHHCHH..HHHHHHHHH CS
  CTP_transf_like  83 dklylvigadvledfsewk..eleeilgnv 110
                      +  ++v ++d+++ +  +k  e  +il+++
       EPX73929.1 295 N--FFVKDEDTFQVTLAEKptESFHILDKR 322
                      6..999999998886555544444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (362 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       430  (0.0239835); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2730.58
//
Query:       EPX73930.1  [L=637]
Description: thymidylate synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.9e-108  361.7   0.0   2.6e-108  361.2   0.0    1.2  1  Thymidylat_synt  Thymidylate synthase
    4.1e-53  179.4   0.5    6.2e-53  178.8   0.5    1.3  1  Flavoprotein     Flavoprotein
  ------ inclusion threshold ------
      0.083   13.1   0.5        0.2   11.9   0.5    1.7  1  DUF1059          Protein of unknown function (DUF1059)
        3.1    5.9   7.2        4.1    5.5   7.2    1.1  1  Nop14            Nop14-like family


Domain annotation for each model (and alignments):
>> Thymidylat_synt  Thymidylate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  361.2   0.0  5.7e-112  2.6e-108       1     268 []     343     637 .]     343     637 .] 0.94

  Alignments for each domain:
  == domain 1  score: 361.2 bits;  conditional E-value: 5.7e-112
                      HHHHHHHHHHHHH-EEEE-TTSSEEEEEEE.EEEEEEGGGCB----SSST--HHHHHHHHHHHHTT--BTHHHHTTT--TTH.....HHHHHT. CS
  Thymidylat_synt   1 kqYldlvrkileeGeekedRtgtgtisvfg.aqlrfdlsegefPllTtkkvflksvieEllWflsgetnvkeLqekgvkiWd.....ewadee. 87 
                      +qYldl+r i++ G++++dRtgtgt+svf+  qlrf+l+++++PllTtk+vfl+ v+eEllWf++g+t++++L+ekg++iWd     e++d+  
       EPX73930.1 343 NQYLDLIRYIMQYGRSRPDRTGTGTRSVFApPQLRFSLRNQTLPLLTTKRVFLRGVLEELLWFIRGDTDANHLTEKGIHIWDgngsrEFLDQLg 436
                      59****************************99**************************************************887775544445 PP

                      ......TB-SSSHHHHHHHBTST........TTSSB-HHHHHHHHHHHSTT-ST-EEE---GGGGGGSSS--SEEEEEEEE..SEE....TEEE CS
  Thymidylat_synt  88 ......gdlgpvYGkqwrkfkae........egkkidqlakvidqlkenpdsRriivsawnpaeldkmaLppChvlfqfyvkdkke....gkLs 163
                            gdlgpvYG+qwr+f+ae        +gk+idql+kvi++lk+np++Rrii+sawnp  +++maLppCh+++qfyv++ ++    ++Ls
       EPX73930.1 437 mhhrraGDLGPVYGFQWRHFGAEyvgcdadyTGKGIDQLEKVIHTLKTNPYDRRIIMSAWNPLAIPEMALPPCHIFCQFYVNEPSKpggkPELS 530
                      5555559**************99**********************************************************87665787778** PP

                      EEEEEEEEETTTHHHHHHHHHHHHHHHHHHHHT-EEEEEEEEEEEEEEEGGGHHHHHHHHTS---S--EEEE--SSTH..SGGG--GGGEEEES CS
  Thymidylat_synt 164 lqlyqRSaDvflGvpFNiasyalLthmlaqvtglkpgelihtigdaHiYsnhveqvkeqlereprelpklelnkekkv..siedfeledfelen 255
                      +++yqRSaD++lGvpFNiasy++Lthm+a ++g+++ e+ih++gd+HiY++h+e++++ql r+p+++p+l++++++++  +i++f++edf +e+
       EPX73930.1 531 CMMYQRSADMGLGVPFNIASYSVLTHMVAYMCGYEATEFIHVMGDCHIYNDHFEALQTQLVRTPKPFPTLSFRRDASEigKIDKFSIEDFIIEG 624
                      ************************************************************************966655588************* PP

                      ----SXXXXXXX. CS
  Thymidylat_synt 256 Ykphpkikakvav 268
                      Y+p++ ik+k++v
       EPX73930.1 625 YEPWGPIKMKMSV 637
                      ***********97 PP

>> Flavoprotein  Flavoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.8   0.5   1.4e-56   6.2e-53       2     158 .]      32     213 ..      31     213 .. 0.96

  Alignments for each domain:
  == domain 1  score: 178.8 bits;  conditional E-value: 1.4e-56
                   EEEEEE-SSCGGGCHHHHHHHHHH.TTEEEEEEESCHHHHCCHHGGS...................TCSSHHHHHHCTTESEEEEEEEEHHHHHHHH CS
  Flavoprotein   2 killgiTGsvaaikalellekLkk.egievqvvltkaAkkfiskeklklaa...............redpilhielrrwadllviaPasantlakia 82 
                   ++l+++TGsvaaik++ ++++L + +g++vqvvlt+ A++f+++e l+                   + pi hielrrwa+ll+iaP+sant+ak+a
    EPX73930.1  32 HVLVAATGSVAAIKLVLIVKSLLTyDGVDVQVVLTDPARNFVETEALTSLGvkvytnaddwscwngLDSPITHIELRRWAHLLLIAPLSANTMAKVA 128
                   99**********************99*******************77777789999**********99***************************** PP

                   TT--SSHHHHHHHT.HCCTTEEEEE.--HHCCTCSTCHHHHHHH..H.T.....................GHHHHHHHHHHCHHT CS
  Flavoprotein  83 nGiadnlltlilra.takkpiliaPamnpamyenpqtlknlekl..e.egvtvikPse.....gdigkgkmaeieeivgkildkl 158
                   nGi+dnllt+++ra t +kpil+aPamn++m++np+t++++e++    ++ ++i P+e     gdig+g+mae+ +iv k+ ++l
    EPX73930.1 129 NGICDNLLTSLVRAwTLHKPILLAPAMNTMMWTNPITQEHMETIgrIyKNTEIILPIEkvlacGDIGMGGMAEWRNIVCKVAEHL 213
                   *********************************************63599*******99*********************99875 PP

>> DUF1059  Protein of unknown function (DUF1059)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.5   4.5e-05       0.2       2      51 ..     187     229 ..     186     231 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 4.5e-05
     DUF1059   2 kefkCgDvgpdCgfeitaeteeEvlrkvaeHakaaHglteippelvekik 51 
                 k ++CgD+g++  +e+       ++ kvaeH + +H+  ++ p+ v++i 
  EPX73930.1 187 KVLACGDIGMGGMAEW-----RNIVCKVAEHLHLEHK--KVVPNAVKNIE 229
                 7899************.....78**************..88888888886 PP

>> Nop14  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   7.2   0.00091       4.1     373     415 ..     229     274 ..     209     327 .. 0.49

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.00091
       Nop14 373 eeedeeeeedeeeeeeeeededdlsdlese.eeeeedeleeel.....l 415
                 e +deee++  e+ee++   edd +d++s+ +++e+de ++e       
  EPX73930.1 229 ETQDEEESSGTENEESN---EDDFDDQDSKeQDSEKDEGNNEPapsyvD 274
                 22233333332222222...22222222222555666654444444331 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (637 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       992  (0.0553294); expected 358.6 (0.02)
Passed bias filter:                      681  (0.0379832); expected 358.6 (0.02)
Passed Vit filter:                        88  (0.00490825); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.67u 0.27s 00:00:00.94 Elapsed: 00:00:00.41
# Mc/sec: 4700.92
//
Query:       EPX73931.1  [L=106]
Description: 60S ribosomal protein L36/L42 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.5e-34  117.6   9.8    3.5e-34  117.1   9.8    1.2  1  Ribosomal_L44  Ribosomal protein L44


Domain annotation for each model (and alignments):
>> Ribosomal_L44  Ribosomal protein L44
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.1   9.8   1.9e-38   3.5e-34       1      76 []      19      94 ..      19      94 .. 0.99

  Alignments for each domain:
  == domain 1  score: 117.1 bits;  conditional E-value: 1.9e-38
                   EEEEEEEEE-------SSSHHHHHHHH.H-SSSGGGGS----.--SSBB--EEEEETTT--EEE----BBS--EEE CS
  Ribosomal_L44  1 kHtehkveqykkgkdselaqgkRrydrkqsgygGqtkpvfkkkaKttKKivlrleCteCkkkrlkalkRakkfelv 76
                   kHt h+v+qykkg ds++aqgkRrydrkqsg+gGqtkpvf++kaK+tKK+vlrleC+ Ck+k + +lkR+k+fel+
     EPX73931.1 19 KHTLHRVTQYKKGPDSKVAQGKRRYDRKQSGFGGQTKPVFHRKAKVTKKVVLRLECVACKYKNQISLKRCKHFELG 94
                   8*************************************************************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       507  (0.0282782); expected 358.6 (0.02)
Passed bias filter:                      219  (0.0122148); expected 358.6 (0.02)
Passed Vit filter:                         9  (0.00050198); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 804.80
//
Query:       EPX73932.1  [L=1308]
Description: actin interacting protein 3 Bud6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.7e-88  296.0  22.8    4.7e-88  296.0  22.8    3.2  4  AIP3      Actin interacting protein 3
  ------ inclusion threshold ------
      0.016   15.3   0.4      0.065   13.3   0.4    2.1  1  DUF1539   Domain of Unknown Function (DUF1539)
       0.25   11.6   2.8       0.51   10.6   0.5    2.9  2  DUF948    Bacterial protein of unknown function (DUF948)


Domain annotation for each model (and alignments):
>> AIP3  Actin interacting protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.2      0.49   2.9e+03      73     100 ..     142     184 ..     119     274 .. 0.46
   2 ?   -4.2   3.9       1.1   6.6e+03     104     142 ..     432     470 ..     403     538 .. 0.51
   3 !  296.0  22.8   7.8e-92   4.7e-88       1     408 []     595    1014 ..     595    1014 .. 0.90
   4 ?   -0.3   1.9     0.076   4.5e+02      59     173 ..    1077    1192 ..    1063    1218 .. 0.66

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 0.49
                 XXXXXXXXXXXXXXXXXXXXXXXXXXX................ CS
        AIP3  73 pldevkkhideslaslskelkelkssi...............e 100
                  ++++++h+ +  + +++ lk+lk +                 
  EPX73932.1 142 SMESLQRHLPHVREIMMHLLKSLKYKQslyksrylkprkeslA 184
                 4444444444444444444444443322233333332222221 PP

  == domain 2  score: -4.2 bits;  conditional E-value: 1.1
                 XXXXXXXXXXXXXXXXXXXXXXX.........XXXXXXX CS
        AIP3 104 aslqevserqeeaakekaseslakkelkaqlkevqslrr 142
                 +++++ + +++++ k+++ + +  ++l++q +e+q+  +
  EPX73932.1 432 EETHDWDPQDFQKNKDTQANNIDPASLSQQNEEIQNHLN 470
                 223333333444444444444444444444444443222 PP

  == domain 3  score: 296.0 bits;  conditional E-value: 7.8e-92
                  XXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.......................... CS
        AIP3    1 FLqlgskvkKvvleeg.ltiasLrllFvekFayspggedfPeiyiqDpksgvrYeLedlsdvkdrsvLsLn.......................... 70  
                  FL++++k+ Kv+ +    t ++Lr lF +kF  ++ + +f e+y++D++++v+Y Led sdvk +s++  +                          
  EPX73932.1  595 FLRFNDKTYKVTSPLVvDTQKKLRDLFQSKFGNEFLDLSF-EFYVEDQDTKVNYLLEDYSDVKPKSLVIAQkqqqdskeklsidnkkamverdtshe 690 
                  9*************9978999*******************.*****************************977777766666666666555444432 PP

                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXX.........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        AIP3   71 iepldevkkhideslaslskelkelkssiesqkaslqevserqeeaakekaseslakkelkaqlkevqslrrdLavlrqlysefkseikeslselre 167 
                    p++e+k+  +  +++l+++l ++++++++ ++++++ + +++ +  ++ +     +++++ +++v+sl+ +La+l+q+ +++  +i  +l+++r+
  EPX73932.1  691 ETPVEEMKS--SPLFQELLQRLINIETKVSNGHTTNAPFQPSSSFKNPKRGK----IETDTTTYQQVKSLQLELASLKQVFATSFAKIPLQLNNFRN 781 
                  225555554..44566677777777777788888888877776666666666....568999*********************************** PP

                  XXXXXXXXXX.XXXXXXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHXXXXXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        AIP3  168 kakkvkeaslastkkssnrayiekgkkkLseesdklvtkvddLqDlvedlrkDVvqRgvrpskkqlesvakeikkakkelkkleeyiktekpvWkki 264 
                  +++ ++  +   +  + +r yi ++k++++  +++lv+++dd++D++e lr+DV+ R+vrp  +q + ++ke +++++ +++l++ i++++p+Wkk+
  EPX73932.1  782 QMNIIN--QK-ASGFGFDRGYILRSKDSIEVAAKSLVKRFDDINDQIELLRSDVLLRKVRPGLDQTSYLNKEKESIENGIRELQKSIEEVTPTWKKQ 875 
                  ******..33.5677********************************************************************************** PP

                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTXXXXXXXXXXXX.XXXXXXXXX.-HHHHHHHHHHHHHT----HHHHHHHHHHH CS
        AIP3  265 WekELqkvveeqqfLtlqeeLlaDLkeDlekasevfelveqvveeqekeskrnkkskarllipepgedlkeakdtvllevralqpdhesRleAiera 361 
                  WekEL+ +v+eq+fL+++++L+aDL++D +++++v+++v++++e q+++     ksk+ +++p+++ d+k ++++++++v +l+pd++ Rl+Aier 
  EPX73932.1  876 WEKELNAIVQEQEFLDNHTSLVADLNKDFDSVTTVLSNVSAIAELQARSGI---KSKPLSVKPTST-DIKGIREQIHTDVLKLRPDSDVRLQAIERF 968 
                  ***********************************************9999...455667666666.****************************** PP

                  HHHHHTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        AIP3  362 eklrekelearredefqkELgeFVeekkLkksGGveEverlRkkkde 408 
                  e  ++k++ + + def++E++eF++++kL+k+GGveE+er R  +de
  EPX73932.1  969 EAFQRKKV-LLHVDEFEQEIQEFINDDKLRKIGGVEEIERRRLVQDE 1014
                  ********.*********************************99997 PP

  == domain 4  score: -0.3 bits;  conditional E-value: 0.076
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXX.........XXXXXXXXXXXXXXXXXXXX CS
        AIP3   59 sdvkdrsvLsLniepldevkkhideslaslskelkelkssiesqkaslqevserqeeaakekaseslakkelkaqlkevqslrrdLavlrqlysefk 155 
                  +d  + s++ L ie  ++ +k+ d+sl + s+++ + +  + ++++ +   + ++++  +ek+ +s ++ + +a+ +++ ++++d+++   +++++ 
  EPX73932.1 1077 QDTGESSIVPLPIERGENGEKETDTSLINASHSVSSDSLDTMKNNTVSPANTYNRADLDEEKEADSFRNMTRNASSDSLDAMENDITSSSIIHDTSD 1173
                  5677788888999988888888888888877777665543333333333323333333333334445567788999999999999999888888887 PP

                  XXXXXXXXXX.XXXXXXXX CS
        AIP3  156 seikeslsel.rekakkvk 173 
                  ++ +++ s++ r+ + +v 
  EPX73932.1 1174 HDEEKENSSIlRDMVPSVS 1192
                  7766665555144444555 PP

>> DUF1539  Domain of Unknown Function (DUF1539)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.4   1.1e-05     0.065      10      52 ..     845     887 ..     843     914 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.1e-05
     DUF1539  10 sLlenspqswkelnrkLekeikklaqnlrdeWkkilkylskke 52 
                 s l+++++s++   r+L+k i++++++++++W+k l+++ +++
  EPX73932.1 845 SYLNKEKESIENGIRELQKSIEEVTPTWKKQWEKELNAIVQEQ 887
                 567788999999999************************9953 PP

>> DUF948  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1       1.9   1.1e+04      46      63 ..     500     517 ..     484     518 .. 0.74
   2 ?   10.6   0.5   8.5e-05      0.51      28      82 ..     858     919 ..     844     922 .. 0.77

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.9
      DUF948  46 lkevedllakvnelledv 63 
                 l+e+++l+++ n l  dv
  EPX73932.1 500 LEELDRLVNTNNSLSTDV 517
                 677778888888777776 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 8.5e-05
      DUF948  28 ldeaaatieele........kqvdpilkevedllakvnelledvneklekvdplteavadlge 82 
                 ++e++++iee++        k++++i++e e l +    l++d+n+  ++v ++ ++v  ++e
  EPX73932.1 858 IRELQKSIEEVTptwkkqweKELNAIVQEQEFLDN-HTSLVADLNKDFDSVTTVLSNVSAIAE 919
                 55666666666666666666********9765555.5566******************98865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1308 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1633  (0.0910815); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.86u 0.28s 00:00:01.14 Elapsed: 00:00:00.42
# Mc/sec: 9345.60
//
Query:       EPX73933.1  [L=152]
Description: DUF1761 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      1e-24   87.2   2.8    1.2e-24   87.0   2.8    1.0  1  DUF1761      Protein of unknown function (DUF1761)
  ------ inclusion threshold ------
       0.15   11.4   0.1        0.4   10.0   0.1    1.7  1  MttA_Hcf106  mttA/Hcf106 family


Domain annotation for each model (and alignments):
>> DUF1761  Protein of unknown function (DUF1761)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.0   2.8   1.3e-28   1.2e-24       2     124 ..      15     142 ..      14     143 .. 0.98

  Alignments for each domain:
  == domain 1  score: 87.0 bits;  conditional E-value: 1.3e-28
     DUF1761   2 avllaalaafvvGflwYgpvFgkaWmkergmteekakeaenk.......alamglslvlslliayvlaallaalgartfkagallglllglgfiapaii 93 
                 a++l+++++++++fl+Ygp++g+ W+  ++m+++ +++++++       ++++ + ++ +++++y++aall+ +g+ ++k+++++gl+++ +  +p ++
  EPX73933.1  15 AIVLGVAFDHAASFLVYGPLMGDLWK--KAMSPAPLHTQTSTsspakkaVTTYTSNILSTCIQTYSIAALLQLTGTISMKGAFYVGLYVFGASGLPDVV 111
                 9*************************..**********88889******************************************************** PP

     DUF1761  94 snalfekkslklvlIdagywlvtllvmgvil 124
                   +++ek+ + ++l+++++ +v+ ++m+++l
  EPX73933.1 112 DYIFTEKRGCSYTLVKTVSSFVKSVGMSMVL 142
                 *****************************98 PP

>> MttA_Hcf106  mttA/Hcf106 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.1   4.5e-05       0.4      11      25 ..      96     110 ..      94     111 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 4.5e-05
                  HHHHHHS-TTTHHHH CS
  MttA_Hcf106  11 vValllFGpkkLPEv 25 
                   V l +FG+++LP+v
   EPX73933.1  96 YVGLYVFGASGLPDV 110
                  69999********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       506  (0.0282224); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.21s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1163.71
//
Query:       EPX73934.1  [L=604]
Description: shugoshin Sgo2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.3e-11   42.9   6.6    1.3e-10   41.0   6.6    2.0  1  Shugoshin_N     Shugoshin N-terminal coiled-coil region
    1.9e-07   30.7   4.8    1.9e-07   30.7   4.8    2.2  2  Shugoshin_C     Shugoshin C terminus
  ------ inclusion threshold ------
      0.015   15.7   6.9      0.096   13.1   6.9    2.5  1  ZapB            Cell division protein ZapB
       0.46   10.3   5.2        1.1    9.0   0.3    3.7  3  DUF4316         Domain of unknown function (DUF4316)


Domain annotation for each model (and alignments):
>> Shugoshin_N  Shugoshin N-terminal coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.0   6.6   2.8e-14   1.3e-10       2      42 ..      14      54 ..      14      57 .. 0.96

  Alignments for each domain:
  == domain 1  score: 41.0 bits;  conditional E-value: 2.8e-14
  Shugoshin_N  2 KrkylrqNreLAKsNsalslkirelekevseLlsENlnLRe 42
                 K+k lrq++e++++++a+s++i++l  e+++LlsEN++LR+
   EPX73934.1 14 KKKQLRQYKEIIRISKAQSARIKDLQLENERLLSENIDLRS 54
                 89**************************************9 PP

>> Shugoshin_C  Shugoshin C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.7   4.8   4.2e-11   1.9e-07       1      25 []     549     572 ..     549     572 .. 0.90
   2 ?   -3.7   2.1       2.4   1.1e+04       2       8 ..     583     589 ..     582     591 .. 0.61

  Alignments for each domain:
  == domain 1  score: 30.7 bits;  conditional E-value: 4.2e-11
  Shugoshin_C   1 gRpsRrarkvvsYKEPSLnsKMRRP 25 
                  gR++R  rk v+Y++P L++KMRR+
   EPX73934.1 549 GRSRRE-RKRVNYALPGLRTKMRRD 572
                  678888.5****************7 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 2.4
  Shugoshin_C   2 RpsRrar 8  
                  R+ Rra+
   EPX73934.1 583 RRHRRAK 589
                  6667774 PP

>> ZapB  Cell division protein ZapB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   6.9   2.1e-05     0.096      19      70 ..      34      85 ..      26      86 .. 0.94

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 2.1e-05
        ZapB 19 titlLqmeieeLkeeneelkeenreleeeneqlkeereawqerlkkLLgkle 70
                +i+ Lq e+e+L  en  l + + +lee++e  +   e +qe+l +LL k++
  EPX73934.1 34 RIKDLQLENERLLSENIDLRSVAINLEEQLESQQLKNEGLQEKLGSLLTKFQ 85
                799**********************************************985 PP

>> DUF4316  Domain of unknown function (DUF4316)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.2      0.63   2.8e+03      23      38 ..     164     186 ..     160     190 .. 0.66
   2 ?    9.0   0.3   0.00025       1.1      22      44 .]     379     401 ..     379     401 .. 0.94
   3 ?    1.1   0.0     0.073   3.3e+02      21      29 ..     450     462 ..     448     507 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.63
     DUF4316  23 lNNgpp.......eekvpeakps 38 
                 +NN  +       +++++ +++s
  EPX73934.1 164 INNSEKasssftrNHETNREQES 186
                 78888877777764444444444 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00025
     DUF4316  22 ilNNgppeekvpeakpsvldrLk 44 
                 ++NN p++++ pe+++s+l rL+
  EPX73934.1 379 RVNNYPNPQDLPEKRKSSLSRLR 401
                 68*******************95 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.073
     DUF4316  21 GilNNgpp....e 29 
                 GilNN +      
  EPX73934.1 450 GILNNRASpirtS 462
                 9****98855331 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (604 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1634  (0.0911373); expected 358.6 (0.02)
Passed bias filter:                      347  (0.0193541); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.62u 0.27s 00:00:00.89 Elapsed: 00:00:00.45
# Mc/sec: 4019.85
//
Query:       EPX73935.1  [L=637]
Description: SCY1 protein kinase Ppk3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.5e-05   22.3   0.0    0.00013   21.3   0.0    1.6  1  Pkinase_Tyr  Protein tyrosine kinase
    0.00013   22.2   0.2     0.0015   18.9   0.2    2.7  2  HEAT_2       HEAT repeats
    0.00052   19.5   0.1     0.0062   15.9   0.0    2.1  2  Pkinase      Protein kinase domain
  ------ inclusion threshold ------
      0.037   14.1   0.7      0.037   14.1   0.7    2.3  3  Cnd1         non-SMC mitotic condensation complex subunit 1
       0.19   12.0   7.0       0.28   11.5   0.0    4.1  4  HEAT         HEAT repeat
       0.83   10.2   2.5         58    4.3   0.2    3.2  3  HEAT_EZ      HEAT-like repeat


Domain annotation for each model (and alignments):
>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.0   4.5e-08   0.00013      46     199 ..      63     210 ..      27     253 .. 0.75

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 4.5e-08
                  HHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEE CS
  Pkinase_Tyr  46 eelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvk 143
                  +   + a+ +k ++hp i+k+l    ++  l+i te v+   L + L ++     + +++ +  + +A+++++Le+k+l+H ++    v l+e+    
   EPX73935.1  63 KLTEQAADQFKVIRHPCIIKILETHKDSTALYIATEVVR--PLIDELGSS-----NNNQKQCGLWRIASALSFLEEKSLIHGNVQMSSVYLNESYEWV 153
                  3444567788889***********************998..477777776.....6777788899********************************* PP

                  E-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE...EEHHHHHHHHHHHHHHHH CS
  Pkinase_Tyr 144 isDfGLardiekddeyvkkeeaklpvkWmapEslkekk...ftsksDvWsfGvllwEif 199
                  ++Df L  +    d+ +k+ +   p++ +a  s++e +     s+ D   f  l + +f
   EPX73935.1 154 LGDFFLVGSN--YDTFKKNFQILNPFNSLASSSVRELVlhrEYSQVDCIEFTYLAYQVF 210
                  ****999876..45555566666666666666665555322234555555655555555 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       1.4   4.2e+03      38      58 ..     350     370 ..     347     378 .. 0.77
   2 !   18.9   0.2     5e-07    0.0015       5      76 ..     426     513 ..     423     518 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.4
      HEAT_2  38 ellededpavRraaaeaLgai 58 
                 ++l++ + +vR   ++aL + 
  EPX73935.1 350 SCLKTVNNRVRTLLVDALYKH 370
                 667788889999999998665 PP

  == domain 2  score: 18.9 bits;  conditional E-value: 5e-07
      HEAT_2   5 lqalendpdpevrraairaLg........rignpealpaLvellededpavRraaaeaLgaig........dpealpaLkellddddd 76 
                 l++l+nd+ p +r++ i++Lg        +i+++ +++aL + l+d+ ++ R+a  + + a +         ++ lp    ll dd++
  EPX73935.1 426 LALLQNDAQPSIRINSIICLGkiselldqQIRTRVLVAALSKSLKDPIADARKATLDVMLATAayfsvkelASKLLPCVVPLLVDDNE 513
                 6899*****************999888888888899*******************998755432333333335566777777776665 PP

>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   2.1e-06    0.0062      52     144 ..      72     159 ..      56     173 .. 0.88
   2 ?    1.0   0.0     0.073   2.2e+02     215     259 ..     208     252 ..     182     254 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 2.1e-06
                 HHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTT CS
     Pkinase  52 lkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGl 144
                 +k ++hp i++++e+ ++++ ly+ +e+v+      l+ + gs ++++ +  +++i+++l++l +k++iH  +  + + ++e+ e  ++DF l
  EPX73935.1  72 FKVIRHPCIIKILETHKDSTALYIATEVVR-----PLIDELGSSNNNQKQCGLWRIASALSFLEEKSLIHGNVQMSSVYLNESYEWVLGDFFL 159
                 57789************************9.....445544678888888999***********************99999999999999955 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.073
                 HHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHH CS
     Pkinase 215 kilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeell 259
                 ++++ ++++ ++++++++++ ++   lkkl+++  k+R++++e l
  EPX73935.1 208 QVFDSINDKAVDFNQRENVPANMHGSLKKLISQGSKQRISISEFL 252
                 4445555788999999************************99987 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       1.1   3.3e+03      68     123 ..      69     129 ..      58     131 .. 0.56
   2 ?   -3.1   0.0       2.4   7.3e+03      61      83 ..     346     368 ..     327     373 .. 0.70
   3 ?   14.1   0.7   1.2e-05     0.037      18     119 ..     418     526 ..     403     546 .. 0.67

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 1.1
        Cnd1  68 eDenprVvanalaalteisekse.....naiynllpdiisklsdalnecsewgqitilefL 123
                  D+ + ++  +++ + e ++ s+     +++++ l+d + + ++++++c  w   + l+fL
  EPX73935.1  69 ADQFKVIRHPCIIKILETHKDSTalyiaTEVVRPLIDELGSSNNNQKQCGLWRIASALSFL 129
                 5666666666666666666665323222333444444444444466667777777777666 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 2.4
        Cnd1  61 selaklleDenprVvanalaalt 83 
                   ++++l+  n+rV+++ + al 
  EPX73935.1 346 IPFLSCLKTVNNRVRTLLVDALY 368
                 45677788888888877776665 PP

  == domain 3  score: 14.1 bits;  conditional E-value: 1.2e-05
        Cnd1  18 lveylvepLrkrLkDedpyVRktaaivvakL..ilndmvkekgflselaklleDenprVvanalaalteisek..senaiynllpdiisklsdalne.. 110
                 l   l+  L    +D +p +R + +i++ k+  +l + ++ + +++ l k l+D+ +  ++ +l ++   +     ++++ +llp ++  l+d+  e  
  EPX73935.1 418 LNNDLLRTLALLQNDAQPSIRINSIICLGKIseLLDQQIRTRVLVAALSKSLKDPIADARKATLDVMLATAAYfsVKELASKLLPCVVPLLVDDN-Esi 515
                 55566666777778888889999999998888888888888888888888888888877777776666666555433555566666666666443.334 PP

        Cnd1 111 ..csewgqiti 119
                    se+  ++ 
  EPX73935.1 516 cvSSEEVTQKF 526
                 44444444444 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       1.5   4.4e+03       5      25 ..     348     368 ..     347     369 .. 0.81
   2 ?   11.5   0.0   9.4e-05      0.28       6      30 ..     426     451 ..     422     452 .. 0.83
   3 ?    0.6   0.1      0.32   9.5e+02       4      22 ..     464     482 ..     461     486 .. 0.84
   4 ?   -0.0   0.3      0.48   1.4e+03       1      15 [.     500     514 ..     500     518 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.5
                 HHHHHT-SSHHHHHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAakaLg 25 
                 +l++l+  + +VR   + aL 
  EPX73935.1 348 FLSCLKTVNNRVRTLLVDALY 368
                 67788888999**99999885 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 9.4e-05
                 HHHH.T-SSHHHHHHHHHHHHHHHHC CS
        HEAT   6 lkll.sDpspeVReaAakaLgalaev 30 
                 l ll +D  p++R +++ +Lg+++e 
  EPX73935.1 426 LALLqNDAQPSIRINSIICLGKISEL 451
                 34566******************985 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.32
                 HHHHHHT-SSHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAak 22 
                 +l k l+Dp ++ R+a++ 
  EPX73935.1 464 ALSKSLKDPIADARKATLD 482
                 68899**********9875 PP

  == domain 4  score: -0.0 bits;  conditional E-value: 0.48
                 HHHHHHHHHT-SSHH CS
        HEAT   1 llPlllkllsDpspe 15 
                 llP+++ ll D++ +
  EPX73935.1 500 LLPCVVPLLVDDNES 514
                 89*******888876 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0     0.022        67      33      55 .]     425     448 ..     398     448 .. 0.78
   2 ?   -1.7   0.0       1.6   4.7e+03      28      48 ..     460     480 ..     453     483 .. 0.78
   3 ?    4.3   0.2     0.019        58      24      43 ..     495     514 ..     475     517 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.022
     HEAT_EZ  33 LlalLnddsd.eVRaaAagaLgnl 55 
                  lalL++d + ++R +++++Lg++
  EPX73935.1 425 TLALLQNDAQpSIRINSIICLGKI 448
                 3569955555599*********97 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.6
     HEAT_EZ  28 eilpaLlalLnddsdeVRaaA 48 
                 ++++aL + L+d+ ++ R+a+
  EPX73935.1 460 VLVAALSKSLKDPIADARKAT 480
                 789999999988866777776 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.019
     HEAT_EZ  24 plvpeilpaLlalLnddsde 43 
                  l +++lp+ ++lL dd+ +
  EPX73935.1 495 ELASKLLPCVVPLLVDDNES 514
                 456799********999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (637 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       626  (0.0349155); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.61u 0.26s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 4489.19
//
Query:       EPX73936.1  [L=148]
Description: TRAPP complex subunit 2-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-16   61.0   0.1    1.5e-16   60.7   0.1    1.1  1  Sedlin_N  Sedlin, N-terminal conserved region


Domain annotation for each model (and alignments):
>> Sedlin_N  Sedlin, N-terminal conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.7   0.1   8.3e-21   1.5e-16       1     128 [.      11     141 ..      11     143 .. 0.85

  Alignments for each domain:
  == domain 1  score: 60.7 bits;  conditional E-value: 8.3e-21
    Sedlin_N   1 iigkkdnplyelefssskekeekelkeLnqfilhasLDivedlqwk....tnnlylgkvdkfeklsvsayvtnskikflllhesssskkkdekikqffq 95 
                 i g++++ ly   f+s +++  ++    +q+++  sLD+++dl+      +n+++lg +   e++s +a+++n+++kf+l ++ss+   ++++i+q+++
  EPX73936.1  11 IAGPRNEQLYLEVFDSLEKTLLSK----YQYLSELSLDVIQDLVQDpersSNDCFLGLLGVEEDISTYAFCSNTNVKFILAVRSSDFLVRESEIRQLLR 105
                 568899999999999999887333....7888888888888877767777************************************************* PP

    Sedlin_N  96 evhelyvktlmnPFy..kvneeir.SpaFdkkvkkl 128
                 +++++ ++ ++nPF+    +++++ S  F++ +++l
  EPX73936.1 106 RIYTVHTHAVCNPFSleLSTDTLKqSLYFNETLQQL 141
                 **************9763455555598998888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       438  (0.0244297); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.27s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 1099.78
//
Query:       EPX73937.1  [L=2044]
Description: N-end-recognizing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.8e-19   69.7   9.6    1.8e-19   69.7   9.6    2.4  2  zf-UBR     Putative zinc finger in N-recognin (UBR box)
    9.2e-08   31.8   0.0    2.6e-07   30.3   0.0    1.8  1  ClpS       ATP-dependent Clp protease adaptor protein ClpS
     0.0047   16.8   0.1     0.0047   16.8   0.1    3.5  3  zf-RING_5  zinc-RING finger domain


Domain annotation for each model (and alignments):
>> zf-UBR  Putative zinc finger in N-recognin (UBR box)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.7   9.6     3e-23   1.8e-19       2      70 .]      98     166 ..      97     166 .. 0.92
   2 ?   -6.7   5.2         3   1.8e+04      15      31 ..    1911    1928 ..    1905    1950 .. 0.65

  Alignments for each domain:
  == domain 1  score: 69.7 bits;  conditional E-value: 3e-23
      zf-UBR   2 CtkvfkkgevvyrCltCsldetsviCeeCfkaskHeghelvelstkrng.gvCdCGdeeawkeegfCkkh 70 
                 C++vf++gev+yrC+tC+ d+t+v+C+ Cf++++Heghe+ ++s++++  gvCdCGd+eawk +  Ck h
  EPX73937.1  98 CGHVFRDGEVIYRCKTCGADSTCVLCAPCFRSTNHEGHET-HVSISTSFsGVCDCGDPEAWKVDLPCKIH 166
                 ***************************************9.666655545************9999*988 PP

  == domain 2  score: -6.7 bits;  conditional E-value: 3
      zf-UBR   15 CltCsldets.viCeeCf 31  
                  C  C++++   ++C +C 
  EPX73937.1 1911 CCMCHKTPVLpAVCLQCG 1928
                  666666653337777774 PP

>> ClpS  ATP-dependent Clp protease adaptor protein ClpS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.3   0.0   4.3e-11   2.6e-07       5      55 ..     244     295 ..     240     310 .. 0.90

  Alignments for each domain:
  == domain 1  score: 30.3 bits;  conditional E-value: 4.3e-11
                 -EEEEEES-S-S-HHHHHHHHHHHSSS.-HHHHHHHHHHHHHHSEEEEEEE- CS
        ClpS   5 qYkvvLlNDdvttmefVvevLqkvfgk.skeeAteimlevhreGravvgvgt 55 
                  ++v+L+ND+++t+e Vv++ q++++  s++   +++  v+  Gr  +++ t
  EPX73937.1 244 VFRVMLWNDEFNTFEGVVSCVQRAVNTaSESFGLQVAQRVDSIGRFSIKTST 295
                 699***********************99999**************9999985 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.3   4.6         3   1.8e+04      20      42 ..      98     123 ..      96     130 .. 0.56
   2 !   16.8   0.1   7.9e-07    0.0047      11      43 ..    1419    1474 ..    1409    1475 .. 0.93
   3 ?   -5.4   7.3         3   1.8e+04       2      33 ..    1911    1940 ..    1907    1954 .. 0.70

  Alignments for each domain:
  == domain 1  score: -5.3 bits;  conditional E-value: 3
   zf-RING_5  20 CgHifCekClkkll...ekeavCpiC 42 
                 CgH+f +  +  +    +++ +C +C
  EPX73937.1  98 CGHVFRDGEVIYRCktcGADSTCVLC 123
                 67776554443333344445555555 PP

  == domain 2  score: 16.8 bits;  conditional E-value: 7.9e-07
   zf-RING_5   11 keekfyltsCgHifCekClkkll.......................ekeavCpiCr 43  
                  + e+ y+ sCgH ++ +C++++                        ++++ Cp+C+
  EPX73937.1 1419 NIEGLYVSSCGHLMHTRCFDTYAnsrllrrsdpstyindkhkttpaTRYFMCPLCG 1474
                  67899**************************************************6 PP

  == domain 3  score: -5.4 bits;  conditional E-value: 3
   zf-RING_5    2 CnkCfeklskeekfyltsCgHifCekClkkll 33  
                  C  C++      +++ ++Cg ++C +  ++ +
  EPX73937.1 1911 CCMCHKTP--VLPAVCLQCGSVVCFSARQTTT 1940
                  55555555..7788999999999977666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2044 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1023  (0.0570584); expected 358.6 (0.02)
Passed bias filter:                      544  (0.0303419); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.21u 0.31s 00:00:01.52 Elapsed: 00:00:00.54
# Mc/sec: 11307.47
//
Query:       EPX73938.1  [L=698]
Description: muskelin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-68  230.3   3.5    4.4e-68  229.1   1.7    2.1  2  Muskelin_N  Muskelin N-terminus
    4.1e-15   55.6   0.0    6.3e-05   23.2   0.0    6.7  8  Kelch_3     Galactose oxidase, central domain
    3.5e-14   52.4   1.3    0.00027   20.9   0.0    4.9  4  Kelch_5     Kelch motif
      3e-12   46.3   9.6    5.4e-05   23.1   0.0    5.8  6  Kelch_4     Galactose oxidase, central domain
      2e-09   37.4  12.7    0.00013   22.1   0.4    5.8  7  Kelch_6     Kelch motif
    3.9e-09   36.0   8.3    0.00039   19.9   0.4    5.6  6  Kelch_1     Kelch motif
    1.7e-08   34.1  12.3     0.0005   19.9   0.9    5.8  6  Kelch_2     Kelch motif
  ------ inclusion threshold ------
       0.18   11.9   0.0         10    6.2   0.0    2.8  3  DUF1617     Protein of unknown function (DUF1617)


Domain annotation for each model (and alignments):
>> Muskelin_N  Muskelin N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  229.1   1.7     2e-71   4.4e-68       2     194 ..       3     200 ..       2     203 .. 0.97
   2 ?    0.2   0.0      0.26   5.9e+02     142     186 ..     413     456 ..     378     464 .. 0.75

  Alignments for each domain:
  == domain 1  score: 229.1 bits;  conditional E-value: 2e-71
                 -EE--EEEEEES---TT--GGGGG---TT-TTSSEE-S-.....SSS---EEEEEEEEEEEEEEEE---SS--TTSEEEEEEEEEEETTEEEEEEEE-- CS
  Muskelin_N   2 skelsyeihsyssyssaylPenilvdkPndqnsrWsaet.....nseeqyliLkleksaivkkitfGkyekshvcnlkkfrvyggrdeeemvelLegGL 95 
                 ++ l+y+ih +ssys++y+P ni   +P++ +srWs+         + qy++Lkl+++ +v++i fGky  +h+cnlk+f vyggrd+ +++ lL++GL
  EPX73938.1   3 QRILPYTIHDWSSYSGKYHPYNIAKHEPRKVDSRWSCANskffsKLDMQYVLLKLKEPCVVTDISFGKYCAPHLCNLKEFAVYGGRDQWHLRLLLKAGL 101
                 688**********************************88788777899*************************************************** PP

                 -SSS--EEEE---EETT...EE--EEEEEEEEEEESSS-S--EE--EEEEEE--HHHHGGGS--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Muskelin_N  96 kndseketfnLkvkkeekieeslaikyikivPLlawgvefnfsiWyveLrGlddasavsatlknrelllekkalrlcLkyfrqkgyldifevlekktkv 194
                 +nds++e f L+ +ke      +++kyikivPL+a+++efn+siWyveL+G + ++ +s+++k r + lekka++ +L+yf  kg  ++++++ +++++
  EPX73938.1 102 TNDSNTESFVLQSQKESPNIYPFVCKYIKIVPLQAHAPEFNLSIWYVELHGYNAPHCLSTVEKQRVKELEKKAIKYLLSYFLYKGNSQVYSAIAHHYQI 200
                 **************99888789***********************************************************************999986 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.26
                 EEEEEE--HHHHGGGS--XXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Muskelin_N 142 veLrGlddasavsatlknrelllekkalrlcLkyfrqkgyldife 186
                 v+  G+ + +++     n ++ l ++ +  c++y  ++g l if+
  EPX73938.1 413 VD-YGIWEKKVIAFKSSNANMKLLTERMGHCMEYASEEGLLYIFG 456
                 33.467777777777788888888888888888888888887775 PP

>> Kelch_3  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       3.1     7e+03       4      11 ..      82      89 ..      80      90 .. 0.82
   2 ?   -2.1   0.0       2.4   5.3e+03      34      47 ..     252     268 ..     217     269 .. 0.50
   3 !   23.2   0.0   2.8e-08   6.3e-05       3      46 ..     275     318 ..     273     321 .. 0.85
   4 ?    1.0   0.0      0.24   5.5e+02       2      32 ..     332     361 ..     331     374 .. 0.76
   5 ?    5.4   0.0      0.01        23       2      46 ..     388     443 ..     387     445 .. 0.76
   6 !   13.7   0.0   2.6e-05     0.059       3      33 ..     451     480 ..     449     493 .. 0.81
   7 ?    1.5   0.0      0.17   3.9e+02       4      47 ..     508     561 ..     505     562 .. 0.69
   8 ?    0.1   0.0      0.49   1.1e+03       2      24 ..     567     592 ..     566     601 .. 0.66

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 3.1
     Kelch_3  4 lyifGGlg 11
                + ++GG++
  EPX73938.1 82 FAVYGGRD 89
                89****97 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 2.4
     Kelch_3  34 i...aslppaRaghaat 47 
                 i   ++  + R+gh ++
  EPX73938.1 252 IskfGRGIGSRSGHQMV 268
                 23344445567777665 PP

  == domain 3  score: 23.2 bits;  conditional E-value: 2.8e-08
     Kelch_3   3 rlyifGGlgddgqdrlndvyvydldtntWaei.as.lppaRaghaa 46 
                 ++y +GG++  g +  +d++ ++++t tW  + ++ +p+ R++h +
  EPX73938.1 275 CIYHYGGWD--GIETFSDFWKFSVETQTWSLLgSNqPPGKRVCHRM 318
                 5888*****..99999**************996443566*****76 PP

  == domain 4  score: 1.0 bits;  conditional E-value: 0.24
     Kelch_3   2 drlyifGGlgddgqdrlndvyvydldtntWa 32 
                 ++++  GG+  ++ d+  d++ y+++   W+
  EPX73938.1 332 NYFGTAGGNL-ISPDVKPDFWKYSIEERLWT 361
                 6666667888.7889999*******988887 PP

  == domain 5  score: 5.4 bits;  conditional E-value: 0.01
     Kelch_3   2 drlyifGGlgd.dgqdrlndvyvydldtntWaei........asl..ppaRaghaa 46 
                 + +yi GG+   +g  +  ++y+y +d + W++         a++   + R+gh++
  EPX73938.1 388 NVIYICGGCKWdPGDLVFETFYLYHVDYGIWEKKviafkssnANMklLTERMGHCM 443
                 789*******955555558888*****99***666788666655433669999986 PP

  == domain 6  score: 13.7 bits;  conditional E-value: 2.6e-05
     Kelch_3   3 rlyifGGlgddg.qdrlndvyvydldtntWae 33 
                  lyifGG +  + q++l d++v+++++++ ++
  EPX73938.1 451 LLYIFGGQT--HdQQFLADMHVISTSSWEAQS 480
                 69*******..55*************996554 PP

  == domain 7  score: 1.5 bits;  conditional E-value: 0.17
     Kelch_3   4 lyifGGlgddgqdrl....ndvyvydldtntWaei.......aslpp.aRaghaat 47 
                 ++ f G+    ++++     + ++y +   +W+++       +++ p aR gha++
  EPX73938.1 508 IFAFYGYE--QREYHkilqPSIWAYYIKQKQWKKVidinekiGDPHPcARFGHALA 561
                 55566666..333334444888999999999**665556656888889*****987 PP

  == domain 8  score: 0.1 bits;  conditional E-value: 0.49
     Kelch_3   2 drlyifGGlgddgqdrl.....ndvyvy 24 
                 +++yi+GG+   +  +l     +d++ +
  EPX73938.1 567 ETFYISGGNA--SSHPLkpmklKDFWKL 592
                 689*****97..5555445555555555 PP

>> Kelch_5  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.3   1.5e-06    0.0033       4      41 ..     261     298 ..     260     298 .. 0.90
   2 ?    2.3   0.0     0.076   1.7e+02       2      21 ..     310     331 ..     309     356 .. 0.80
   3 !   20.9   0.0   1.2e-07   0.00027       4      39 ..     437     473 ..     436     476 .. 0.85
   4 !    6.4   0.0     0.004       8.9       1      28 [.     551     578 ..     551     596 .. 0.69

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 1.5e-06
     Kelch_5   4 pRaghcavtvs..ekiYvyGGkvgrdgsvsddvyvLdlps 41 
                 +R+gh +v+ s    iY yGG++g   + ++d++ +++++
  EPX73938.1 261 SRSGHQMVYNSrdKCIYHYGGWDG--IETFSDFWKFSVET 298
                 8********976588********6..***********986 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.076
     Kelch_5   2 PppRaghcavtvs..ekiYvyG 21 
                 P  R +h ++ +s  + iY+ G
  EPX73938.1 310 PGKRVCHRMILDSsrQCIYLLG 331
                 889*********87888**966 PP

  == domain 3  score: 20.9 bits;  conditional E-value: 1.2e-07
     Kelch_5   4 pRaghcavtvs..ekiYvyGGkvgrdgsvsddvyvLdl 39 
                  R+ghc+ ++s  + +Y++GG ++ d+++  d++v ++
  EPX73938.1 437 ERMGHCMEYASeeGLLYIFGGQTH-DQQFLADMHVIST 473
                 69********95566********5.*******998666 PP

  == domain 4  score: 6.4 bits;  conditional E-value: 0.004
     Kelch_5   1 iPppRaghcavt.vs.ekiYvyGGkvgrdg 28 
                 +P++R+gh+ ++ ++ e  Y+ GG  +  +
  EPX73938.1 551 HPCARFGHALAVnWEtETFYISGGNAS--S 578
                 6**********9778566777777765..3 PP

>> Kelch_4  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.2   3.8e-07   0.00086       2      48 ..     262     309 ..     261     310 .. 0.86
   2 ?   -0.1   0.1      0.44   9.9e+02      31      44 ..     350     363 ..     349     371 .. 0.83
   3 ?    2.6   0.0     0.063   1.4e+02      13      37 ..     388     414 ..     381     425 .. 0.75
   4 !   23.1   0.0   2.4e-08   5.4e-05       2      40 ..     438     475 ..     437     492 .. 0.84
   5 ?    1.0   0.0       0.2   4.5e+02      31      45 ..     527     548 ..     526     553 .. 0.72
   6 ?   -1.3   0.0         1   2.3e+03       1      20 [.     554     574 ..     554     579 .. 0.88

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 3.8e-07
     Kelch_4   2 Raghsatsi.pdgtiylfGGrgedgtllndlylldlstntWrrl.gslP 48 
                 R gh+++++ +d  iy +GG  +  ++++d ++++++t tW+ l ++ P
  EPX73938.1 262 RSGHQMVYNsRDKCIYHYGGWDGI-ETFSDFWKFSVETQTWSLLgSNQP 309
                 99*******666688888899999.9****************9965555 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.44
     Kelch_4  31 lylldlstntWrrl 44 
                  ++++++ + W+ l
  EPX73938.1 350 FWKYSIEERLWTCL 363
                 59*********998 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.063
     Kelch_4  13 gtiylfGGrged.gtllndl.ylldls 37 
                 + iy+ GG+ +d g l+ ++ yl+ + 
  EPX73938.1 388 NVIYICGGCKWDpGDLVFETfYLYHVD 414
                 89*********9667776666666555 PP

  == domain 4  score: 23.1 bits;  conditional E-value: 2.4e-08
     Kelch_4   2 Raghsatsi.pdgtiylfGGrgedgtllndlylldlstnt 40 
                 R+gh++ +    g +y+fGG++ d ++l+d++++++   +
  EPX73938.1 438 RMGHCMEYAsEEGLLYIFGGQTHDQQFLADMHVIST--SS 475
                 9********666*********************554..44 PP

  == domain 5  score: 1.0 bits;  conditional E-value: 0.2
     Kelch_4  31 lylldlstntWrrl.......g 45 
                 ++++ +++++W+++       g
  EPX73938.1 527 IWAYYIKQKQWKKVidinekiG 548
                 799********98855554444 PP

  == domain 6  score: -1.3 bits;  conditional E-value: 1
     Kelch_4   1 pRaghs.atsipdgtiylfGG 20 
                 +R+gh+ a+ +   t+y+ GG
  EPX73938.1 554 ARFGHAlAVNWETETFYISGG 574
                 7999*9888889999999998 PP

>> Kelch_6  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.0         8   1.8e+04      36      44 ..     228     236 ..     227     237 .. 0.76
   2 !   22.1   0.4   5.9e-08   0.00013       2      45 ..     262     306 ..     261     313 .. 0.83
   3 ?    2.0   0.1      0.13   2.8e+02      10      41 ..     330     361 ..     325     365 .. 0.85
   4 ?   -3.0   0.1       4.8   1.1e+04      14      19 ..     390     395 ..     388     412 .. 0.82
   5 !   14.0   0.0     2e-05     0.045       9      39 ..     447     477 ..     438     487 .. 0.82
   6 ?   -0.7   0.0       0.9     2e+03      12      43 ..     506     540 ..     492     545 .. 0.77
   7 ?    2.5   0.0     0.086   1.9e+02       2      35 ..     555     594 ..     554     602 .. 0.76

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 8
     Kelch_6  36 etksWeqlp 44 
                 ++k+W++++
  EPX73938.1 228 QNKVWKEIS 236
                 688999886 PP

  == domain 2  score: 22.1 bits;  conditional E-value: 5.9e-08
     Kelch_6   2 raghslvs..vggkiYifGGytdsspylnkvwvydpetksWeqlpp 45 
                 r gh++v    +  iY +GG+++  ++++++w++++et +W+ l++
  EPX73938.1 262 RSGHQMVYnsRDKCIYHYGGWDG-IETFSDFWKFSVETQTWSLLGS 306
                 77899977635568*********.8******************985 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.13
     Kelch_6  10 vggkiYifGGytdsspylnkvwvydpetksWe 41 
                  g+++  +GG+  s     ++w+y++e + W+
  EPX73938.1 330 LGNYFGTAGGNLISPDVKPDFWKYSIEERLWT 361
                 5778888899999999999*******999886 PP

  == domain 4  score: -3.0 bits;  conditional E-value: 4.8
     Kelch_6  14 iYifGG 19 
                 iYi+GG
  EPX73938.1 390 IYICGG 395
                 688877 PP

  == domain 5  score: 14.0 bits;  conditional E-value: 2e-05
     Kelch_6   9 svggkiYifGGytdsspylnkvwvydpetks 39 
                 s  g +YifGG+t++ ++l +++v++ +++ 
  EPX73938.1 447 SEEGLLYIFGGQTHDQQFLADMHVISTSSWE 477
                 55689********************988875 PP

  == domain 6  score: -0.7 bits;  conditional E-value: 0.9
     Kelch_6  12 gkiYifGGytds...spylnkvwvydpetksWeql 43 
                  +i++f Gy +       + ++w y ++ k W+++
  EPX73938.1 506 QRIFAFYGYEQReyhKILQPSIWAYYIKQKQWKKV 540
                 48999999999888888888999999999999876 PP

  == domain 7  score: 2.5 bits;  conditional E-value: 0.086
     Kelch_6   2 raghslvs.vg.gkiYifGGytds....spylnkvwvydp 35 
                 r gh+l++ +  +++Yi GG+  s     + l+++w++ +
  EPX73938.1 555 RFGHALAVnWEtETFYISGGNASShplkPMKLKDFWKLQI 594
                 5567775558856999999999889999888899888865 PP

>> Kelch_1  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       2.3   5.1e+03      19      30 ..     152     163 ..     152     164 .. 0.88
   2 !   19.9   0.4   1.8e-07   0.00039      12      44 ..     274     306 ..     270     308 .. 0.91
   3 ?    1.0   0.0      0.14   3.2e+02      28      43 ..     349     364 ..     335     365 .. 0.90
   4 ?    3.6   0.3     0.022        49      12      22 ..     388     398 ..     387     420 .. 0.80
   5 !    9.5   0.0   0.00032      0.72      12      40 ..     450     477 ..     449     480 .. 0.87
   6 ?    0.7   0.0      0.18     4e+02      28      42 ..     526     540 ..     505     540 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 2.3
                 EBCSSSBEEEEE CS
     Kelch_1  19 Gsdggnalssve 30 
                 G++ + +ls+ve
  EPX73938.1 152 GYNAPHCLSTVE 163
                 8899999****9 PP

  == domain 2  score: 19.9 bits;  conditional E-value: 1.8e-07
                 TEEEEEEEBCSSSBEEEEEEEETTTTEEEEECC CS
     Kelch_1  12 gkiYviGGsdggnalssvevyDpetntWrelps 44 
                  +iY  GG+dg +  s+++ +++et+tW+ l s
  EPX73938.1 274 KCIYHYGGWDGIETFSDFWKFSVETQTWSLLGS 306
                 58999************************8876 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.14
                 EEEEEETTTTEEEEEC CS
     Kelch_1  28 svevyDpetntWrelp 43 
                 +++ y+ e+  W++l+
  EPX73938.1 349 DFWKYSIEERLWTCLS 364
                 78***********987 PP

  == domain 4  score: 3.6 bits;  conditional E-value: 0.022
                 TEEEEEEEBCS CS
     Kelch_1  12 gkiYviGGsdg 22 
                 + iY++GG+  
  EPX73938.1 388 NVIYICGGCKW 398
                 88******965 PP

  == domain 5  score: 9.5 bits;  conditional E-value: 0.00032
                 TEEEEEEEBCS.SSBEEEEEEEETTTTEEE CS
     Kelch_1  12 gkiYviGGsdg.gnalssvevyDpetntWr 40 
                 g +Y++GG+ + +++l +  v+++   +W+
  EPX73938.1 450 GLLYIFGGQTHdQQFLADMHVIST--SSWE 477
                 88********************95..4554 PP

  == domain 6  score: 0.7 bits;  conditional E-value: 0.18
                 EEEEEETTTTEEEEE CS
     Kelch_1  28 svevyDpetntWrel 42 
                 s+++y  ++++W ++
  EPX73938.1 526 SIWAYYIKQKQWKKV 540
                 89**********975 PP

>> Kelch_2  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1       1.4   3.1e+03      32      48 ..     229     245 ..     225     246 .. 0.70
   2 !   19.9   0.9   2.2e-07    0.0005       2      45 ..     262     304 ..     261     306 .. 0.94
   3 !   12.3   0.1   5.8e-05      0.13       3      47 ..     316     365 ..     312     367 .. 0.89
   4 ?    2.1   0.0     0.098   2.2e+02      12      25 ..     388     401 ..     379     419 .. 0.73
   5 ?    2.3   0.0      0.08   1.8e+02       8      32 ..     446     476 ..     439     487 .. 0.77
   6 ?   -1.5   0.0       1.3   2.9e+03      15      32 ..     570     586 ..     555     593 .. 0.74

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 1.4
     Kelch_2  32 vhvldlekhvWeevtpl 48 
                 + v+ + +++W++ +++
  EPX73938.1 229 NKVWKEISQKWRKEAQP 245
                 44599999999987665 PP

  == domain 2  score: 19.9 bits;  conditional E-value: 2.2e-07
     Kelch_2   2 rgghsssvp..ggkiyvvGGahtdnpnlsssdvhvldlekhvWeev 45 
                 r+gh +++   + +iy +GG+   ++ + +sd++ +  e+++W+++
  EPX73938.1 262 RSGHQMVYNsrDKCIYHYGGW---DGIETFSDFWKFSVETQTWSLL 304
                 89999999999**********...*******************987 PP

  == domain 3  score: 12.3 bits;  conditional E-value: 5.8e-05
     Kelch_2   3 gghsssvpggkiyvvGGa.....htdnpnlsssdvhvldlekhvWeevtp 47 
                 ++++  +++++iy+ G +     ++  ++++  d++ +  e++ W++++ 
  EPX73938.1 316 HRMILDSSRQCIYLLGNYfgtagGNLISPDVKPDFWKYSIEERLWTCLSK 365
                 44556699***************************************986 PP

  == domain 4  score: 2.1 bits;  conditional E-value: 0.098
     Kelch_2  12 gkiyvvGGahtdnp 25 
                 + iy++GG   d +
  EPX73938.1 388 NVIYICGGCKWDPG 401
                 78******933444 PP

  == domain 5  score: 2.3 bits;  conditional E-value: 0.08
     Kelch_2   8 svpggkiyvvGGa......htdnpnlsssdv 32 
                 ++ +g +y++GG        +d+ + s+s++
  EPX73938.1 446 ASEEGLLYIFGGQthdqqfLADMHVISTSSW 476
                 567899******9877777777777777766 PP

  == domain 6  score: -1.5 bits;  conditional E-value: 1.3
     Kelch_2  15 yvvGGahtdnpnlsssdv 32 
                 y+ GG  ++  +l+++++
  EPX73938.1 570 YISGGN-ASSHPLKPMKL 586
                 899999.66666666665 PP

>> DUF1617  Protein of unknown function (DUF1617)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0    0.0045        10      20      70 ..     420     469 ..     407     477 .. 0.86
   2 ?    1.9   0.0     0.099   2.2e+02      43     106 ..     517     579 ..     506     622 .. 0.69
   3 ?   -1.5   0.1       1.1   2.4e+03     110     128 ..     674     692 ..     665     698 .] 0.77

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0045
     DUF1617  20 ikvtnmranrgrakllakvvdkikeyakdetdlidlyaakdkddkfvideh 70 
                  kv  +++     kll+  + +  eya +e+ l+ ++  + +d++f+ d h
  EPX73938.1 420 KKVIAFKSSNANMKLLTERMGHCMEYASEEG-LLYIFGGQTHDQQFLADMH 469
                 378889999999***************9987.77899999*******9998 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.099
     DUF1617  43 keyakdetdlidlyaakdkddkfvidehknikladpakldelndlln.eladeeivikggeyskr 106
                 +ey k     i  y  k+k+ k vid   n k+ dp     + + l  +   e   i gg+ s +
  EPX73938.1 517 REYHKILQPSIWAYYIKQKQWKKVIDI--NEKIGDPHPCARFGHALAvNWETETFYISGGNASSH 579
                 6777777788889999*********96..667889998888877665156677788999988754 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 1.1
     DUF1617 110 flnfleecedeftsseiil 128
                 + ++l  cede+  s+ +l
  EPX73938.1 674 IRDLLPHCEDEIVPSDTLL 692
                 5678999*****9998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (698 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       480  (0.0267723); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.60u 0.29s 00:00:00.88 Elapsed: 00:00:00.44
# Mc/sec: 4712.89
//
Query:       EPX73939.1  [L=285]
Description: SUR7 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.4e-31  109.0  11.6    3.1e-31  108.7  11.6    1.1  1  SUR7             SUR7/PalI family
  ------ inclusion threshold ------
      0.059   12.7   1.0       0.12   11.8   1.0    1.6  1  TMEM43           Transmembrane protein 43


Domain annotation for each model (and alignments):
>> SUR7  SUR7/PalI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.7  11.6   3.4e-35   3.1e-31       4     212 .]      13     273 ..       8     273 .. 0.92

  Alignments for each domain:
  == domain 1  score: 108.7 bits;  conditional E-value: 3.4e-35
        SUR7   4 illflslaalilllfailgsiknstpltsiylskfdls.gldlaqi..............................................gladvys 55 
                 ++++++++  +l++++i+++++++  +++iy+++++++  ++ +                                                +++d+ys
  EPX73939.1  13 AAVLCTAVGGLLSILCIINQTQHNIAFQNIYFVQLNTTsLFSVK-NatelaqtigqevggsladqlaeviekdnpqvealvtqleremkkvsNVPDWYS 110
                 6678888999***********9999999**********444444.369*************************************************** PP

        SUR7  56 fgvwgyC...dnsdvnytkCskpkagypfdpleelnsesngkvd......lPsnlrktlsklnnltkalfilhiialvlsfislvvgllaicvspdnsr 145
                 +g+w+yC   +++ +n t+C+kp+++y f+p+e ++++ +++ +      l +++++ l+  + ++ al +l++ ++++ + +l   l+++c       
  EPX73939.1 111 VGLWNYCkgsSKDYTNPTSCTKPSSKYYFNPIEMIENDLSNAAKtqvslhLSDEAQYGLKISKGICYALRALYVLGFMFFIFTLASVLVSWC-----PF 204
                 *******99888889999*************75555555544445567********************************************.....55 PP

        SUR7 146 llsflnlllsvlsflatllaalldtllfvfvrkkin..lkefgikaslglkflafaWlalaaallvvif 212
                 ++ +l++++ ++++++tl+aa+++++ + +v  k++  +  ++i ++lg+k +a+ ++++aa ++++if
  EPX73939.1 205 FGPLLVSVCCFFATVFTLVAACMAVAFYRVVISKVEenITMLNIPMELGKKVYAYSFISAAAGIAALIF 273
                 599**************************************************************9997 PP

>> TMEM43  Transmembrane protein 43
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   1.0   1.3e-05      0.12     196     250 ..     182     233 ..     124     236 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 1.3e-05
      TMEM43 196 lmflgll.lllsplsvlvslipllgelvglglalvalllslslsllvialawllyR 250
                 l++lg++ +++++ svlvs+ p+ g l+  ++ ++a +++l+ +++ +a+    yR
  EPX73939.1 182 LYVLGFMfFIFTLASVLVSWCPFFGPLLVSVCCFFATVFTLVAACMAVAF----YR 233
                 5556665156788899*******888876666666666666666666665....43 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (285 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1249  (0.0696637); expected 358.6 (0.02)
Passed bias filter:                      627  (0.0349713); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 2064.84
//
Query:       EPX73940.1  [L=621]
Description: alpha-actinin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.6e-51  170.9   0.1    2.9e-26   91.8   0.0    2.8  2  CH               Calponin homology (CH) domain
    1.1e-13   50.8   0.0    6.3e-09   35.6   0.0    2.8  2  CAMSAP_CH        CAMSAP CH domain
    2.3e-07   30.8   0.4    1.4e-06   28.2   0.0    2.7  3  EFhand_Ca_insen  Ca2+ insensitive EF hand
    0.00026   21.1   0.1        1.1    9.4   0.0    3.1  3  CH_2             CH-like domain in sperm protein
  ------ inclusion threshold ------
       0.36   11.0   3.1       0.61   10.3   0.3    2.7  3  Fib_alpha        Fibrinogen alpha/beta chain family
          2    8.9   8.2       0.33   11.4   1.2    2.3  2  Fez1             Fez1


Domain annotation for each model (and alignments):
>> CH  Calponin homology (CH) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.3   0.1   6.4e-25   1.9e-21       2     108 ..       9     114 ..       8     115 .. 0.93
   2 !   91.8   0.0   9.8e-30   2.9e-26       3     108 ..     125     230 ..     123     231 .. 0.96

  Alignments for each domain:
  == domain 1  score: 76.3 bits;  conditional E-value: 6.4e-25
                 HHHHHHHHHHHHHHTTSTTSSTTSCHHHHHTTSHHHHHHHHHHSTTTSSGGGSTTT.HHHHHHHHHHHHHHHHHHTTCHTTSS-HHHHHTTSHHHHHHH CS
          CH   2 eqkkellrWinshleeagpkvkvedfeedlrDGvlLckLlnklapglvdkkklnks.efkkleNinlaldvaekklgvpkvlieaedlvegknksvltl 99 
                 +q +++++W+n +l    + ++v ++ +dl+DG+lL++Ll+ +  + + k + +++ + +kleN+n+al+ ++ + g+p+++i+++d+v+g+ k++l+l
  EPX73940.1   9 VQNRTFTKWFNTKLSLH-DLPTVVNLGKDLSDGILLIQLLEIIGDEQLGKYNRKPRlRLHKLENVNKALEYIK-SKGMPLTNIGPADIVDGNLKLILGL 105
                 5789**********986.88999********************88888888887778*************999.************************* PP

                 HHHHHHHHH CS
          CH 100 laqLfrafq 108
                 +++L+++f 
  EPX73940.1 106 IWTLILRFT 114
                 *****9986 PP

  == domain 2  score: 91.8 bits;  conditional E-value: 9.8e-30
                 HHHHHHHHHHHHHTTSTTSSTTSCHHHHHTTSHHHHHHHHHHSTTTSSGGGSTTTHHHHHHHHHHHHHHHHHHTTCHTTSS-HHHHHT...TSHHHHHH CS
          CH   3 qkkellrWinshleeagpkvkvedfeedlrDGvlLckLlnklapglvdkkklnksefkkleNinlaldvaekklgvpkvlieaedlve...gknksvlt 98 
                 +k+ ll W++++++++ p v+v+df+ ++ DG+++c+L++k++p+l+++ +l  ++ ++++N++la+d+a++++g+p++  ++ed+ +   ++++s++t
  EPX73940.1 125 AKEGLLLWCQRKTGKYRPEVEVQDFSRSWTDGLAFCALIHKHRPDLLNYHEL--DKRDNRKNMQLAFDIAQEHIGIPRLI-DVEDVCDvdrPDERSIMT 220
                 7999************************************************..799*********************99.*******9989999**** PP

                 HHHHHHHHHH CS
          CH  99 llaqLfrafq 108
                 ++a+ f+af+
  EPX73940.1 221 YIAEYFHAFS 230
                 *******986 PP

>> CAMSAP_CH  CAMSAP CH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.0     4e-05      0.12       6      31 ..      23      48 ..      19      94 .. 0.91
   2 !   35.6   0.0   2.1e-12   6.3e-09      11      84 ..     144     210 ..     135     211 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 4e-05
   CAMSAP_CH  6 slplippvedllrdlsdGvaLaalih 31
                sl ++p v +l +dlsdG++L +l++
  EPX73940.1 23 SLHDLPTVVNLGKDLSDGILLIQLLE 48
                67889******************996 PP

  == domain 2  score: 35.6 bits;  conditional E-value: 2.1e-12
   CAMSAP_CH  11 ppvedllrdlsdGvaLaalihfYcPqliklediclkesmsladslyNiqllqefcerkLgnsvfhl.tleDllyv 84 
                  +v+d+ r+++dG+a +alih  +P+l++ +      +++ +d  +N+ql+++ +++++g  ++ l ++eD+ +v
  EPX73940.1 144 VEVQDFSRSWTDGLAFCALIHKHRPDLLNYH------ELDKRDNRKNMQLAFDIAQEHIG--IPRLiDVEDVCDV 210
                 579*************************995......5669*****************95..5555589988765 PP

>> EFhand_Ca_insen  Ca2+ insensitive EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       1.1   3.2e+03      52      64 ..     400     412 ..     346     417 .. 0.56
   2 ?   -3.0   0.0       2.8   8.4e+03       8      31 ..     489     513 ..     486     515 .. 0.75
   3 !   28.2   0.0   4.8e-10   1.4e-06       1      47 [.     554     601 ..     554     615 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 1.1
                      .S-TTEEECCCHT CS
  EFhand_Ca_insen  52 davekayDYvsFl 64 
                       +  +++D v+Fl
       EPX73940.1 400 GEWRDQLDHVEFL 412
                      3444556666665 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 2.8
                      HHCHHHHHCTTS.SSEEHHHHHHH- CS
  EFhand_Ca_insen   8 veeaFralaggK.pYvTeedLrrel 31 
                      +   Fr  +++K +   e++++++l
       EPX73940.1 489 IATVFRHFEKKKsNLLNELEFYAAL 513
                      5667999988885677788999887 PP

  == domain 3  score: 28.2 bits;  conditional E-value: 4.8e-10
                      G-STHHHHHCHHHHHCTTSSSEEHHHHHHH-TTCHH.HHHHCCSEEE- CS
  EFhand_Ca_insen   1 dvdsaeqveeaFralaggKpYvTeedLrrellpeqa.eylierMpeys 47 
                      d dsa qv+ aF  +a+gK+YvT  dL ++ ++ +  ++l ++M++  
       EPX73940.1 554 DRDSARQVLYAFCDVADGKSYVTVDDLMKSQVRPNFvSFLERNMKKND 601
                      679************************9999988888*******9865 PP

>> CH_2  CH-like domain in sperm protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.0   0.00038       1.1       3      80 ..      16      95 ..      14     110 .. 0.75
   2 !    8.3   0.0   0.00083       2.5      12      57 ..     144     189 ..     129     196 .. 0.84
   3 ?   -2.7   0.0       2.3   6.9e+03       6      34 ..     470     496 ..     466     505 .. 0.51

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00038
        CH_2  3 kWlqs.ldlsrsvk..nlkrdfsdGvlvAeilkkyypklvdlhnysngssla.aklnNWetLekvlkklgiklskelieeva 80
                kW ++ l+l+   +  nl +d+sdG+l+ ++l+ +  +  +l +y+++  l+  kl+N +   + +k +g++l++   ++++
  EPX73940.1 16 KWFNTkLSLHDLPTvvNLGKDLSDGILLIQLLEIIGDE--QLGKYNRKPRLRlHKLENVNKALEYIKSKGMPLTNIGPADIV 95
                7888887777655545999****************999..999999988877358888887777777777777765555555 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00083
        CH_2  12 rsvknlkrdfsdGvlvAeilkkyypklvdlhnysngsslaaklnNW 57 
                  +v++++r  +dG+++  +++k+ p l++ h+ +++++ ++++  +
  EPX73940.1 144 VEVQDFSRSWTDGLAFCALIHKHRPDLLNYHELDKRDNRKNMQLAF 189
                 5678999***************************999988877665 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 2.3
        CH_2   6 qsldlsrsvknlkrdfsdGvlvAeilkky 34 
                 q+  l+r++++l+++  dG  +A ++ ++
  EPX73940.1 470 QKEILDREKRTLSKQELDG--IATVFRHF 496
                 4444555555555555555..34455554 PP

>> Fib_alpha  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.48   1.4e+03      34      67 ..     239     272 ..     218     302 .. 0.56
   2 ?   10.3   0.3    0.0002      0.61      33     127 ..     337     432 ..     303     437 .. 0.76
   3 ?   -2.1   0.0       1.4   4.1e+03      83     101 ..     459     477 ..     447     499 .. 0.63

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.48
                 CHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH CS
   Fib_alpha  34 kkdlekleneleeisnstkeaeelvkeikdslre 67 
                  +++e+ ++ l + ++++++ e+ ++++ +s+ +
  EPX73940.1 239 ARRVERFTEVLMSTRSMQEDYETRMTRLLESISR 272
                 3444555555555555555555444444444333 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.0002
                 CCHHHCCCCCCCCCCCCH....HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Fib_alpha  33 vkkdlekleneleeisns....tkeaeelvkeikdslrekqkskkdndnvikksskeleeeilrlketidaqesnirvLqnvlesneqkiqkLeqdidq 127
                    ++ +le+e +++  +    +k +++ ++eik+ +r   ++     n ++k+ +++ +ei++l+ +  +q  ++++Lq+ l  +e +++  ++++d+
  EPX73940.1 337 AGLKIVDLEREWKDFLTEeadrSKLINTRMREIKENMRISFAER---ANSFSKMLSTISNEISNLQGEWRDQLDHVEFLQEHLGPLEIELASVKVHSDN 432
                 55566666666555555500005555555555555555554444...6899**************************************9999998875 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 1.4
                 HHHHHHCCCHHHHHHHCCH CS
   Fib_alpha  83 skeleeeilrlketidaqe 101
                 s+ + ++i +l+++i + e
  EPX73940.1 459 SEIIAHKIKYLQKEILDRE 477
                 4445555555555555444 PP

>> Fez1  Fez1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   1.0      0.22   6.6e+02      62     115 ..     236     299 ..     227     334 .. 0.44
   2 ?   11.4   1.2   0.00011      0.33      36     115 ..     362     474 ..     341     512 .. 0.69

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.22
        Fez1  62 eektlelevcenelqrkkseaellrekvekleeelkelreelselsleeeeaa..........l 115
                 e+ ++ +e+  + l  ++s +e  + ++++l e ++++re  ++++ e++ +            
  EPX73940.1 236 ETAARRVERFTEVLMSTRSMQEDYETRMTRLLESISRVREYWKASTFENTYSDvkahsrdfvgF 299
                 4444444444444555555555555555555555555555444433333222222222222222 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00011
        Fez1  36 lkaqlrelrakleek.eeeikeleesleektlelevcenelqrkkseaellrekvekleeelkelreelselsleeeeaa................... 114
                 + +++re++++++ +  e+++++++ l++ ++e+ +++ e + + +++e l+e+++ le el++++ +  +  +   e++                   
  EPX73940.1 362 INTRMREIKENMRISfAERANSFSKMLSTISNEISNLQGEWRDQLDHVEFLQEHLGPLEIELASVKVHSDNCREAGIEENdytlfsyddleheygvtse 460
                 46789*******97636788999******************************************9977775555444446666666666666555544 PP

        Fez1 115 .............l 115
                              l
  EPX73940.1 461 iiahkikylqkeiL 474
                 44433333332221 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (621 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       964  (0.0537676); expected 358.6 (0.02)
Passed bias filter:                      566  (0.031569); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.66u 0.27s 00:00:00.93 Elapsed: 00:00:00.44
# Mc/sec: 4255.92
//
Query:       EPX73941.1  [L=165]
Description: hypothetical protein SOCG_03158 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       629  (0.0350828); expected 358.6 (0.02)
Passed bias filter:                      507  (0.0282782); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.28s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 1164.75
//
Query:       EPX73942.1  [L=570]
Description: CPA1 sodium ion/proton antiporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.8e-81  273.9  38.4    2.2e-81  273.6  38.4    1.0  1  Na_H_Exchanger  Sodium/hydrogen exchanger family
  ------ inclusion threshold ------
       0.57   10.1   5.2        2.9    7.8   1.0    2.5  2  Myc_target_1    Myc target protein 1
       0.78   10.3   0.0       0.78   10.3   0.0    4.0  5  DUF3054         Protein of unknown function (DUF3054)


Domain annotation for each model (and alignments):
>> Na_H_Exchanger  Sodium/hydrogen exchanger family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  273.6  38.4   3.7e-85   2.2e-81       2     380 ..      39     443 ..      36     444 .. 0.95

  Alignments for each domain:
  == domain 1  score: 273.6 bits;  conditional E-value: 3.7e-85
                     HHHHHHHHHHHHH.HHHTT.SXHHHHHHHHHHHHTTTTTS..........HHHCHCCHHHHCHHCCHHHHCTCGCCTGCCTHHHHHHHHHHHHHH CS
  Na_H_Exchanger   2 vllillallvgll.arrlk.lpeivgliiaGlllGpsglg....lieps.eedlevlselglilllFlaGleldlrelrknlksilllallgvli 89 
                     +lli ++l+++++ +++++ ++e+v+ +++G+++G++++     +i+++  + ++++++++l+++++++G+el+ +++++n+++il +a++g++i
      EPX73942.1  39 ILLIGALLTSYYVqSKKIRaIHETVISVFVGMVVGLIIRVspglIIQNMvSFHSTYFFNVLLPPIILNSGYELHQSNFFRNIGTILTFAFAGTFI 133
                     55666567777799*************************9888778888********************************************** PP

                     HHHHHHHHHH.H.....HTXTTCHHHHHHHHHHHTSSXHHHHHHHC.CCCTSTCCCCCCHHHHHHHHHHHCCCCCHHHHHHTXXXXXTSSSTSXH CS
  Na_H_Exchanger  90 tvvliGlllyll.....lilgiplleallfgailsatdpvvvlailkeegrvperlgtlllgesvlnDavavvllavllalakeeaggetsllll 179
                     ++v++G+l+y++       + ++++eal +ga lsatdpv+vlai+ ++ +v+++l+t+++ges+lnDava+v++  l++++ +++ + ++l+++
      EPX73942.1 134 SAVTLGILVYIFsflnfENFHMSFVEALSMGATLSATDPVTVLAIF-NSYKVDQKLYTIIFGESILNDAVAIVMFETLQKFQ-GKQLHLFTLFNG 226
                     **********99***99889**************************.**********************************9.88999******* PP

                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHS..CTHHHHHHHHHHHHHHHHHHHHHTSXXXHHHHHHHHHHHHHHHHHHTTHHHH....HHHHHH.. CS
  Na_H_Exchanger 180 lliflvvavgglllglvigwllrlitrft..dddrelevllvlllallaallaellgvsgilgaflaGlvlseyefsnklsek....lesfre.. 266
                     + if++ ++++ll+g+ ig++++l+++++  ++ +++e +++ll+a+++++++  +++sg++  +++G++l++y+f n +s k    +++++   
      EPX73942.1 227 ITIFIITFFVSLLIGVSIGLMTALLLKYSylRRYPNIESCIILLMAYASYFFSNGCHMSGVVSLLFCGITLKHYAFYN-MSYKaklsTKYVFRvl 320
                     ******************************************************************************.6666678888888888 PP

                     .HHHHHHHHHHHHHHSXHHHHHXXHHHHHHHHHHHHHHHTHHHHHHHHHTTTX.............SSXHHHHHHCCCCSS.BHHHHHHHHHHHH CS
  Na_H_Exchanger 267 .glfnplfFvlvGlsldlkvlnnhlsvlilvllilvaillgrilavflllrll.............glslrealiigfgglqrgavalalaalgp 347
                      +l ++++F+++G+sl+ +v    ++ +i++l++++a++++r+++vf+l++ll             +++ + +++++++gl rgav +alaa ++
      EPX73942.1 321 aQLSENFIFIYLGMSLFTQVDL--VYKPIFILITTIAVTASRYMNVFPLSKLLnrfhrqkdrtlvdHIPYSYQMMLFWAGL-RGAVGVALAAGFE 412
                     8****************88886..*********************************************************.************* PP

                     HHXHHHHTTSSTTTCSTSXHHHHHHHHHHHHHH CS
  Na_H_Exchanger 348 algllarelyallivvvlftvlvqGlslkpllk 380
                      +  +a++l a+++vvv++t++++G++++ +l+
      EPX73942.1 413 GE--NAQTLKATTLVVVVLTLIIFGGTTSRMLE 443
                     **..88888********************9986 PP

>> Myc_target_1  Myc target protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.2    0.0093        55      13      35 ..      54      76 ..      43      92 .. 0.78
   2 ?    7.8   1.0   0.00049       2.9      20      50 ..     229     259 ..     218     265 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.0093
  Myc_target_1 13 lesfdledlilaFcvSmvvGLll 35
                  ++   +++ +++ +v mvvGL++
    EPX73942.1 54 KKIRAIHETVISVFVGMVVGLII 76
                  55556788899999999999998 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.00049
  Myc_target_1  20 dlilaFcvSmvvGLllgaliyvlltwlsrrr 50 
                     i++F+vS+++G+ +g +  +ll + + rr
    EPX73942.1 229 IFIITFFVSLLIGVSIGLMTALLLKYSYLRR 259
                   579*****************99999988877 PP

>> DUF3054  Protein of unknown function (DUF3054)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00013      0.78      35      82 ..      35      79 ..      17     101 .. 0.66
   2 ?   -1.2   0.1       0.5     3e+03      66      82 ..     129     147 ..     103     170 .. 0.61
   3 ?    1.7   0.6     0.059   3.5e+02       3      45 ..     199     244 ..     197     275 .. 0.58
   4 ?   -1.1   0.1      0.46   2.7e+03      62      99 ..     319     356 ..     263     359 .. 0.60
   5 ?   -1.4   0.3      0.56   3.3e+03      75     103 ..     403     431 ..     381     443 .. 0.51

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00013
     DUF3054 35 Flv.glavgWllvaplyearaaskaaralpagvvvwlvavvvGlllRal 82
                F++  l++g ll+    + +++sk  ra+ ++v++ +v++vvGl++R+ 
  EPX73942.1 35 FILlILLIGALLT----SYYVQSKKIRAIHETVISVFVGMVVGLIIRVS 79
                3330123344442....33344557899*******************53 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.5
     DUF3054  66 vvvwlvavvvGlllR..al 82 
                 + ++++av++G+l+   ++
  EPX73942.1 129 AGTFISAVTLGILVYifSF 147
                 4456666666666664333 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.059
     DUF3054   3 vDvvavlvfaliGrlsHge.sl.s.llgvletawPFlvglavgWll 45 
                  D+va+++f ++ +++ ++ +l + + g+   ++ F+v+l++g  +
  EPX73942.1 199 NDAVAIVMFETLQKFQGKQlHLfTlFNGITIFIITFFVSLLIGVSI 244
                 6999999999886666543222122344444444444444444333 PP

  == domain 4  score: -1.1 bits;  conditional E-value: 0.46
     DUF3054  62 lpagvvvwlvavvvGlllRallkggvalsFvlValvvl 99 
                 + a +   ++ + +G+ l + ++   ++ F+l++++++
  EPX73942.1 319 VLAQLSENFIFIYLGMSLFTQVDLVYKPIFILITTIAV 356
                 33444444556677888877777777788888887765 PP

  == domain 5  score: -1.4 bits;  conditional E-value: 0.56
     DUF3054  75 vGlllRallkggvalsFvlValvvlavlL 103
                 vG++l a ++g+ a +  + +lvv++++L
  EPX73942.1 403 VGVALAAGFEGENAQTLKATTLVVVVLTL 431
                 33333333333333333333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (570 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1011  (0.0563891); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.61u 0.30s 00:00:00.90 Elapsed: 00:00:00.45
# Mc/sec: 3826.20
//
Query:       EPX73943.1  [L=79]
Description: hypothetical protein SOCG_05075 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.6e-28   96.8   0.0    6.2e-28   96.7   0.0    1.1  1  COA2      Cytochrome C oxidase assembly factor 2


Domain annotation for each model (and alignments):
>> COA2  Cytochrome C oxidase assembly factor 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.7   0.0   3.5e-32   6.2e-28       1      73 [.       1      76 [.       1      79 [] 0.82

  Alignments for each domain:
  == domain 1  score: 96.7 bits;  conditional E-value: 3.5e-32
        COA2  1 mfrtlkasqkrklvnllfgttaliatatviipsllPCPamknpyldtdsdPaveelpe..nskvivi.deqelksk 73
                mfrtl+asq+r+lvnllfgttal+atatv++psllPCPam+npyl ++ d   e+      s ++vi d+q+ k +
  EPX73943.1  1 MFRTLRASQRRSLVNLLFGTTALFATATVVLPSLLPCPAMQNPYLGSQPDTQEENTKSewTSSIVVIdDKQSQKGR 76
                9*********************************************999877766443123556666156777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       508  (0.028334); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.25s 00:00:00.57 Elapsed: 00:00:00.38
# Mc/sec: 617.43
//
Query:       EPX73944.1  [L=246]
Description: YjeF family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.1e-36  123.5   0.0    9.9e-36  123.2   0.0    1.1  1  YjeF_N    YjeF-related protein N-terminus


Domain annotation for each model (and alignments):
>> YjeF_N  YjeF-related protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.2   0.0   5.5e-40   9.9e-36       2     171 .]      31     199 ..      30     199 .. 0.92

  Alignments for each domain:
  == domain 1  score: 123.2 bits;  conditional E-value: 5.5e-40
      YjeF_N   2 eeLmenagravaevlrallgnspaekkvlvlvGsgnnGgdglaaArhLaqegakVtvllleeeekldedaeralellkkaggkvveekpeedleeklsa 100
                 ++Lme ag +v++v+ + +  s + +kvlv++G+gnnGgdgl+aArhL q g++ tv  + ++++ ++  +r  ++l+ + + +++ + ++  ++ l +
  EPX73944.1  31 DQLMELAGLSVSQVVYREY-PSSSHAKVLVCCGPGNNGGDGLVAARHLWQYGYQPTV--YYPKPSSPDLYKRLCKQLEDLDIPIHTTHTSDLFHQ-LLK 125
                 69***********888888.69999********************************..78999*********************9777776665.557 PP

      YjeF_N 101 pvdlviDAllGiglrgelreelaeliewlnsseapvlavDiPSGldadtGavs.gta...vkadvtvtfgapkrg 171
                 +++l++D l+G++++g++re++ e+++ + +s+  v++vD PS ++ d+G  + g     ++++v ++++apk++
  EPX73944.1 126 QSNLIVDSLFGFSFKGPVREPFGEILSAIVDSKLHVVSVDAPSSWEIDEGPQKeG-PlknFNPNVLISLTAPKPC 199
                 9*************************************************99842.2467*************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       363  (0.0202465); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1740.08
//
Query:       EPX73945.1  [L=461]
Description: EF-1 alpha binding zinc finger protein Zpr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   4.5e-113  374.4   0.1    3.6e-57  192.7   0.0    2.1  2  zf-ZPR1         ZPR1 zinc-finger domain
     0.0045   17.0   3.1       0.37   10.8   0.2    2.5  2  HypA            Hydrogenase/urease nickel incorporation, meta
  ------ inclusion threshold ------
       0.14   12.3   1.5         12    6.0   0.2    2.4  2  zf-RRPl_C4      Putative ribonucleoprotein zinc-finger pf C4 
       0.33   10.9   6.2        1.3    9.0   0.0    3.1  3  OrfB_Zn_ribbon  Putative transposase DNA-binding domain
        1.7    8.7   6.3        1.1    9.3   0.3    2.5  2  zinc-ribbons_6  zinc-ribbons
        2.2    8.3   5.5         10    6.2   0.1    3.2  3  Zn_Tnp_IS1595   Transposase zinc-ribbon domain


Domain annotation for each model (and alignments):
>> zf-ZPR1  ZPR1 zinc-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  180.0   0.1   9.9e-57   2.9e-53       1     159 []      36     191 ..      36     191 .. 0.96
   2 !  192.7   0.0   1.2e-60   3.6e-57       1     159 []     256     415 ..     256     415 .. 0.93

  Alignments for each domain:
  == domain 1  score: 180.0 bits;  conditional E-value: 9.9e-57
     zf-ZPR1   1 slCpsCgkengetrllltkiPyfkeviimsfeCehCgyknnevksageieekGkritlkveseedlnrqvlkSetatveipeleleippgtlegrlttv 99 
                 slC++C+ eng+t+l lt iPyf+e+i++sfeC+hCg+kn +v+ a++++++G+ +tlkv++++dlnr ++kS+ a ++ipel+leip     g+ltt+
  EPX73945.1  36 SLCMQCH-ENGTTKLFLTVIPYFREIILTSFECPHCGFKNAQVQHAETVQPEGSSFTLKVTEKDDLNRTIVKSNEAVIRIPELQLEIPG--RLGQLTTI 131
                 58****7.*******************************************************************************99..99****** PP

     zf-ZPR1 100 EGlLeqikeelekeegdqaer..ed.eekekieeflekleeliegeepftlildDpagnSfie 159
                 EG+L++i+++l   ++dq++r  +  e +++i +fle++ +l+ege +ft+ildD +gnS++e
  EPX73945.1 132 EGVLSNIHDDL---SKDQEARkeSMpEVYQQISQFLERVLQLREGEAHFTFILDDVTGNSWVE 191
                 ***********...7888888643489**********************************96 PP

  == domain 2  score: 192.7 bits;  conditional E-value: 1.2e-60
     zf-ZPR1   1 slCpsCgkengetrllltkiPyfkeviimsfeCehCgyknnevksageieekGkritlkveseedlnrqvlkSetatveipeleleippgtlegrlttv 99 
                 s+CpsC+ +++ t+++l++iP+fkeviims++C+hCgy++nevk++g+i+ekG++itlkv ++edl+r++lkSeta+++i el+l++ pgtl+gr+tt+
  EPX73945.1 256 STCPSCS-HPCDTHMKLLDIPHFKEVIIMSTVCDHCGYRSNEVKTGGAIPEKGRKITLKVMDAEDLSRDILKSETASLQIAELGLDLYPGTLGGRFTTL 353
                 68****5.******************************************************************************************* PP

     zf-ZPR1 100 EGlLeqikeele.keegdqaered.eekekieeflekleeliegeepftlildDpagnSfie 159
                 EG+L+qi++el  +  ++q+++ + e+ +++++fl++l++++e  ++ft++ldDp+++S+++
  EPX73945.1 354 EGILTQIYDELYgRVFSQQSDSMTpEQIANWQQFLSNLTNAKEVGTQFTVVLDDPLAQSYLQ 415
                 ***********9733344444444477********************************986 PP

>> HypA  Hydrogenase/urease nickel incorporation, metallochaperone, hypA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.2   0.00012      0.37      66     104 ..      31      82 ..      13      86 .. 0.81
   2 !    6.1   0.2    0.0037        11      66     102 ..     251     300 ..     233     304 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00012
                 EE--EEEETTTS-EEECHHHHH..............S-TTTSSS-EEEEESSS CS
        HypA  66 evpvkvrCreCgkefeleekal..............rCpkCgsadveivsGee 104
                  ++v+  C +C+++++++   l              +Cp+Cg ++ ++++ e 
  EPX73945.1  31 VQEVESLCMQCHENGTTKLF-LtvipyfreiiltsfECPHCGFKNAQVQHAET 82 
                 5789999*****99998753.14578999**************9999988765 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0037
                 EE--EEEETTTS-EEECHHHHH..............S-TTTSSS-EEEEES CS
        HypA  66 evpvkvrCreCgkefeleekal..............rCpkCgsadveivsG 102
                     + +C +C++  +++ k l               C +Cg ++ e+++G
  EPX73945.1 251 VHTFHSTCPSCSHPCDTHMK-LldiphfkeviimstVCDHCGYRSNEVKTG 300
                 45567789999999987654.2355788999999999*****999999988 PP

>> zf-RRPl_C4  Putative ribonucleoprotein zinc-finger pf C4 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.1    0.0097        29      49      92 ..      32      76 ..      15      85 .. 0.70
   2 ?    6.0   0.2    0.0041        12      40      92 ..     244     296 ..     236     299 .. 0.75

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0097
  zf-RRPl_C4 49 slrdkLCtkCkeknekekeirc.etfeeylkklklCkeCkervek 92
                 + + LC +C+e+ +++  ++    f+e +     C +C  ++ +
  EPX73945.1 32 QEVESLCMQCHENGTTKLFLTViPYFREIILTSFECPHCGFKNAQ 76
                455789****99999977755414577777777788888777665 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.0041
  zf-RRPl_C4  40 vpikelekislrdkLCtkCkeknekeke.ircetfeeylkklklCkeCkervek 92 
                 v+++ +e  +  +  C +C++  +++ + +   +f+e +   ++C++C  r+++
  EPX73945.1 244 VEVDPTEVHTF-HSTCPSCSHPCDTHMKlLDIPHFKEVIIMSTVCDHCGYRSNE 296
                 44444455554.667999999988887779999999999999999999888765 PP

>> OrfB_Zn_ribbon  Putative transposase DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.0   0.00044       1.3      27      43 ..      63      78 ..      53      95 .. 0.78
   2 ?   -1.9   4.8       1.1   3.2e+03      28      38 ..     284     294 ..     244     296 .. 0.65
   3 ?    3.2   0.3     0.027        82      28      40 ..     284     296 ..     280     311 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00044
  OrfB_Zn_ribbon 27 TSktCseCgsknkeals 43
                    TS +C++Cg kn + ++
      EPX73945.1 63 TSFECPHCGFKNAQ-VQ 78
                    9**********998.33 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.1
  OrfB_Zn_ribbon  28 SktCseCgskn 38 
                     S+ C +Cg+++
      EPX73945.1 284 STVCDHCGYRS 294
                     45555555554 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.027
  OrfB_Zn_ribbon  28 SktCseCgsknke 40 
                     S+ C +Cg++++e
      EPX73945.1 284 STVCDHCGYRSNE 296
                     8899999999988 PP

>> zinc-ribbons_6  zinc-ribbons
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   1.2      0.11   3.3e+02       3      23 ..      38      71 ..      26      83 .. 0.57
   2 ?    9.3   0.3   0.00036       1.1       2      47 ..     257     302 ..     256     304 .. 0.92

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.11
                    -SSS-S--EE-S.............SEEE-TTT- CS
  zinc-ribbons_6  3 CpeCqqelekrg.............eqyhCeaCq 23
                    C +C+++ +++              ++++C +C 
      EPX73945.1 38 CMQCHENGTTKLfltvipyfreiilTSFECPHCG 71
                    5555555554444444444444444455555554 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00036
                     --SSS-S--EE-SSEEE-TTT--EEEEEEE-SSS-S---EEEETTE CS
  zinc-ribbons_6   2 kCpeCqqelekrgeqyhCeaCqedlkkealCpeCeqelevlkaCga 47 
                     +Cp+C ++ +++ + +   + +e + + ++C++C+ + + +k  ga
      EPX73945.1 257 TCPSCSHPCDTHMKLLDIPHFKEVIIMSTVCDHCGYRSNEVKTGGA 302
                     7***********999*******************999998888887 PP

>> Zn_Tnp_IS1595  Transposase zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.1    0.0033        10      19      27 ..      65      73 ..      59      82 .. 0.82
   2 ?    0.1   0.9      0.27   8.2e+02      20      26 ..     257     263 ..     252     273 .. 0.77
   3 ?    1.7   0.0     0.084   2.5e+02      20      27 ..     286     293 ..     277     300 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0033
  Zn_Tnp_IS1595 19 fvCPhCgsr 27
                   f CPhCg +
     EPX73945.1 65 FECPHCGFK 73
                   88****965 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.27
  Zn_Tnp_IS1595  20 vCPhCgs 26 
                    +CP C +
     EPX73945.1 257 TCPSCSH 263
                    7999974 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.084
  Zn_Tnp_IS1595  20 vCPhCgsr 27 
                    vC hCg+r
     EPX73945.1 286 VCDHCGYR 293
                    79999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (461 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       851  (0.047465); expected 358.6 (0.02)
Passed bias filter:                      631  (0.0351944); expected 358.6 (0.02)
Passed Vit filter:                        66  (0.00368119); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.59u 0.25s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 3241.66
//
Query:       EPX73946.1  [L=853]
Description: Rad54 Rhp54 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-60  203.5   0.0    9.9e-60  202.1   0.0    1.7  2  SNF2_N      SNF2 family N-terminal domain
    3.1e-39  135.0   5.0    9.9e-39  133.4   5.0    1.9  1  Rad54_N     Rad54 N terminal
    3.2e-17   62.9   0.0    1.9e-16   60.4   0.0    2.3  2  Helicase_C  Helicase conserved C-terminal domain
    2.2e-08   34.3   0.2      2e-07   31.2   0.0    2.3  2  ResIII      Type III restriction enzyme, res subunit
    3.2e-05   24.2   0.8       0.23   11.7   0.0    3.1  3  AAA_22      AAA domain
    0.00025   20.3   0.0    0.00025   20.3   0.0    2.0  2  HDA2-3      Class II histone deacetylase complex subunits 2 a


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  202.1   0.0   3.3e-63   9.9e-60      55     349 ..     288     575 ..     263     576 .. 0.89
   2 ?   -3.0   0.0      0.77   2.3e+03     176     192 ..     754     770 ..     742     779 .. 0.78

  Alignments for each domain:
  == domain 1  score: 202.1 bits;  conditional E-value: 3.3e-63
                 T--EEE---TTS--HHHHHHHHH...HHTTTS---.......S-EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH.....-------------- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxx RF
      SNF2_N  55 vrGGiLaDemGLGKTvqvlalilaqrakeekdkekkrkdtlagptLivvPaslldqWeneierhvsssalrvlvyggqkk.....mkkkntkvapklla 148
                  +G+i+aDemGLGKT+q++al++++ +++ +     + ++  + ++i +P+sl+++W ne+ +++ ++a++ ++ +g+++        +++ + +  + 
  EPX73946.1 288 ASGCIMADEMGLGKTLQCIALLWTLLKQSPQ-----AGKPTIEKAIITCPSSLVKNWANELVKWLGKDAITPFIVDGKSSkqeltVALQQWAQVRGRQV 381
                 68*********************66553333.....3456777789*****************************998877777766666777788889 PP

                 ---EEEE-HHHHHHHT......TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHHHHHHH-TTTT--HHHHHHHTHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 149 dydvvittYdvlsreaelqkkrsvlkqvewkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledlygLlkfLreepfgekqtfdkllqr 247
                 +  v+i +Y++l+  +      + lk+ e+  + +DEgh+lkns+s + +a+ kL+ ++r+il+GTPiqn+l+++++Ll+f +++ +g++  f++ ++ 
  EPX73946.1 382 TRPVLISSYETLRGYV------DCLKNTEIGVLLCDEGHRLKNSDSLTFTALDKLNVQRRIILSGTPIQNDLSEYFSLLNFANPGLLGSRPEFRRNYEI 474
                 99***********888......9**************************************************************************** PP

                 HHH............HHHHHHHHHHHTT-STTEE---GGGT--S---EEEEEEEEE--HHHHHHHH....................HHHHHH-HHH-HH CS
                 xxx............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 248 pie............aqaekgrsrLlqllqrlmlrrakkdveknlPpkteeiiflklskverksYnrllevlrkkalakllkrseaalkssskskekil 334
                 pi              + +++ ++L+++++r+++rr+++ ++k+lP k e+++f+ ls+ ++k+Yn+        ++ +  +++ ++ + s+      l
  EPX73946.1 475 PILrgrdadgsdkdkVTGDEKLAELAKIVNRFIIRRTNDILSKYLPIKYEHVVFCGLSDFQMKLYNH--------FITSPEINKIIKGTGSQ-----PL 560
                 ************998889999*********************************************3........33333333334444444.....89 PP

                 HHHHHHHHHHH---X CS
                 xxxxxxxxxxxxxxx RF
      SNF2_N 335 elllelrqacnhpql 349
                 + +  l++ cnhp+l
  EPX73946.1 561 KAIGILKKLCNHPDL 575
                 999999999999987 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 0.77
                 -S-SEEEES-GGGT--T CS
                 xxxxxxxxxxxxxxxxx RF
      SNF2_N 176 vewkrvvlDEghtlkns 192
                 ++    v+DE++ ++ +
  EPX73946.1 754 QSLSSCVVDEAQDVERH 770
                 55667799**9999876 PP

>> Rad54_N  Rad54 N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.4   5.0   3.3e-42   9.9e-39       3     181 .]      21     244 ..      19     244 .. 0.79

  Alignments for each domain:
  == domain 1  score: 133.4 bits;  conditional E-value: 3.3e-42
     Rad54_N   3 dslerLtkpFkvPasaastreserpaRkrrkvvsYagadgeeeeeesdkkeeekeeekrkdalaarklnk.fpvfrlkdketvlkksFsvPlkkkkqke 100
                 ++ ++L k+Fk+P+   s++++e p+Rkr ++ +Y++ +++ ++++s   +    +e+r +  a +++n+ + ++  kd  tv+kk+F+vP   k +++
  EPX73946.1  21 NAPGKLFKKFKCPSLIISEKRKELPLRKRPRI-NYNEYGSSGNQNDSA--YI---TEERAGLAAIKEANHiILSQGRKDPGTVIKKQFTVPKPVKGHED 113
                 56789***************************.*****9988766443..33...2467888888999998889999999**********998887777 PP

     Rad54_N 101 veelr...ppptLGtrkkvilvprpLhDPtdefAIVLYDPTvD.............................................dkekeeeeeee 151
                  ++ +   ppptLG++k+++++prpL+DP+defAIVLYDPT D                                             +          
  EPX73946.1 114 LSKISfnrPPPTLGMKKRAEFIPRPLYDPADEFAIVLYDPTTDdheeipdikeflaekrkneleakskkgkkqiienqsdteeeevneS---------- 202
                 66655568*********************************************************999988888877654433332211.......... PP

     Rad54_N 152 ekeeeeeekeekkkk.......................k.klphKsLaeiLGik 181
                   ++          +                       k + ++KsL+++LGi+
  EPX73946.1 203 --ND----------StesysqdnleksnesdstttgkgKyRRQNKSLKDLLGIQ 244
                 ..11..........111122222223445566666655269***********96 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.82   2.4e+03      18      74 ..     326     390 ..     307     398 .. 0.69
   2 !   60.4   0.0   6.5e-20   1.9e-16       6     110 ..     616     725 ..     611     726 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.82
                 EEEEEESSHH...HHHH..HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH.....TTSSSEEEESG CS
  Helicase_C  18 kilifvntid...rlek..vklllekkgikvavlhgelpqnereeileqfn.....kgesdvLiatd 74 
                 k++i +++      + +  vk+l  k +i+  +++g+ +++e   +l+q+      + ++ vLi++ 
  EPX73946.1 326 KAIITCPSSLvknWA-NelVKWL-GKDAITPFIVDGKSSKQELTVALQQWAqvrgrQVTRPVLISSY 390
                 566666665533311.1235666.5567999999999999999999999875544233344888775 PP

  == domain 2  score: 60.4 bits;  conditional E-value: 6.5e-20
                 HHHHH..HHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH...TTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHH CS
  Helicase_C   6 llell..kleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfn...kgesdvLiatdvaerGidipkvnlVinfdlprnvts 99 
                 l ++l   ++e ++ki++++n++++l+ ++ l++ +g+k+++l+g+++ n+r++ ++ fn   k+ + +L+++++++ Gi++ ++n +i fd+++n++ 
  EPX73946.1 616 LERMLsqIKRETDDKIVLISNYTSTLDLFEQLCRVRGYKALRLDGTMNVNKRQKLVDHFNdpeKDAFIFLLSSKAGGCGINLIGANRLILFDPDWNPAA 714
                 455555558999**************8888888888************************886677889****************************** PP

                 HHHHHTTSSST CS
  Helicase_C 100 yiqriGRtgRa 110
                  +q+  R++R 
  EPX73946.1 715 DQQALARVWRD 725
                 *********96 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   1.8      0.81   2.4e+03      81     118 ..     171     198 ..     143     235 .. 0.50
   2 !   31.2   0.0   6.6e-11     2e-07       4     170 ..     265     443 ..     263     444 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.81
                 ......GEEEESSS-B--.......-SEEEEEHHHHHHTH CS
      ResIII  81 ayke..igkkvsgdkkkakekdstnkkilvttiqsldads 118
                 ++k+  + k+++g+k+++            ++ +   +++
  EPX73946.1 171 KRKNelEAKSKKGKKQII------------ENQSDTEEEE 198
                 332223333333333333............2222222222 PP

  == domain 2  score: 31.2 bits;  conditional E-value: 6.6e-11
                 E-HHHHHHHHHHT........TTSEEE.EEESTTSTHHHHHHHHHHHH-S...........-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS- CS
      ResIII   4 lreyQeeaienlleklks..krdkrgl.ikmaTGtGKTlvaaklierllkkgkee......kflflvprkslleqtleefkkflseaykeigkkvsgdk 93 
                 lr++Q+e ++ l + ++   +r   g+ ++ + G GKTl +++l + llk+ ++       k+++ +p+ sl++ + +e+ k+l +++  +  +v+g++
  EPX73946.1 265 LRPHQIEGVKFLYKCVTGriDRGASGCiMADEMGLGKTLQCIALLWTLLKQSPQAgkptieKAIITCPS-SLVKNWANELVKWLGKDA-ITPFIVDGKS 361
                 789999999988877776664444555377799*****************9998899***888888886.788899999988888875.4566666666 PP

                 B--..................-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS.TTTHH.HHHT---SEEEEEESS-S CS
      ResIII  94 kka...........kekdstnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgakkswre.ilekfkeavllglTATpe 170
                  k+            ++++ ++ +l++++++l           + l+++++ v+++DE Hrl+ ++s +  +l+k++ + ++ l++Tp 
  EPX73946.1 362 SKQeltvalqqwaqVRGRQVTRPVLISSYETLRGYV-------DCLKNTEIGVLLCDEGHRLKNSDSLTFtALDKLNVQRRIILSGTPI 443
                 66677778999999999999**************99.......778888889************87544435999999*********95 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.0   7.6e-05      0.23      13     131 ..     296     442 ..     285     447 .. 0.76
   2 ?   -3.1   0.0       2.8   8.5e+03      17      62 ..     611     649 ..     610     667 .. 0.64
   3 !    9.2   0.1   0.00045       1.4      82     118 ..     747     782 ..     744     795 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 7.6e-05
      AAA_22  13 esGtGKTtllrrlleqldeeakaee.erpevvfvtlpsstsskdllrellralglelka.....erlsseellealeqalrarav.............. 91 
                 e G GKT+ +  ll +l +++ ++  +  e + +t+pss   k+ ++el++ lg ++ +        s++el  al+q ++ r++              
  EPX73946.1 296 EMGLGKTLQCIALLWTLLKQSPQAGkPTIEKAIITCPSSL-VKNWANELVKWLGKDAITpfivdGKSSKQELTVALQQWAQVRGRqvtrpvlissyetl 393
                 569*****999999999765555445566666*******9.99999999999999999899**966677777777777777777777788888888999 PP

      AAA_22  92 ...........ielliiDEaqhlr.s....eealeeLrsllnlsrkgvqliLvGtp 131
                            i++l+ DE ++l  s     +al +L    n    + ++iL Gtp
  EPX73946.1 394 rgyvdclknteIGVLLCDEGHRLKnSdsltFTALDKL----N---VQRRIILSGTP 442
                 99999******************75333445555554....4...55567777776 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 2.8
      AAA_22  17 GKTtllrrlleqldeeakaeeerpevv..fvtlpsstsskdllrellr 62 
                 GK ++l+r+l+q +         +e+    v +++ ts  dl+++l+r
  EPX73946.1 611 GKMLVLERMLSQIK---------RETDdkIVLISNYTSTLDLFEQLCR 649
                 66666677766663.........2222224455555666666666665 PP

  == domain 3  score: 9.2 bits;  conditional E-value: 0.00045
      AAA_22  82 leqalraravielliiDEaqhlrseealeeLrsllnl 118
                 +++++++++  +  ++DEaq + ++  l +Lr+l+ l
  EPX73946.1 747 FQRQSHKQSL-SSCVVDEAQDVERHFSLDNLRHLFQL 782
                 6899999999.***********669999999999886 PP

>> HDA2-3  Class II histone deacetylase complex subunits 2 and 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -6.6   3.3         6   1.8e+04     140     158 ..     190     207 ..     170     234 .. 0.43
   2 !   20.3   0.0   8.2e-08   0.00025      85     247 ..     605     750 ..     592     767 .. 0.79

  Alignments for each domain:
  == domain 1  score: -6.6 bits;  conditional E-value: 6
                 ESSS--S--S---S-.... CS
      HDA2-3 140 rysgeklydekkkkskdtk 158
                 + s+++  + +++++ +t+
  EPX73946.1 190 NQSDTEEEEVNESND-STE 207
                 222222222222222.122 PP

  == domain 2  score: 20.3 bits;  conditional E-value: 8.2e-08
                 HHHHT-HHHHHHHHHHHHHTTSS....EEEEEEE-STHHHHHHHHHHTTSSSEEEESSS--S--S---S-..................-SEEEEEEESS CS
      HDA2-3  85 klaetSgKFkvlndlvnliierkrksslnvlvvakskkeldLiEalllGkklkikrysgeklydekkkkskdtkknsrktkeklkkkihsltihllstt 183
                 +  + SgK+ vl+++++ i  ++     +++++++   +ldL E l   ++ k  r++g++  ++ +k              +  ++  ++++++l ++
  EPX73946.1 605 IDSSLSGKMLVLERMLSQIKRET---DDKIVLISNYTSTLDLFEQLCRVRGYKALRLDGTMNVNKRQKLV------------DHFNDPEKDAFIFLLSS 688
                 55688**********99998777...679********************************999999999............23344556778888777 PP

                 ---TTTS--TT-S-EEEEEE-SST--TTSHHHHHHH----.------EEEEEETTSHHHHHHHHT CS
      HDA2-3 184 rqltkdksllenikfdliiafDssvdtsspsveslrtqnr.kknklpiirlvpinSieHvkLcfk 247
                 +         + i ++ +i fD++ +++ ++  + r  +  +k+++ ++r +++ +ie    +++
  EPX73946.1 689 KAGG---CGINLIGANRLILFDPDWNPAADQQALARVWRDgQKKDCFVYRFIATGTIEEKIFQRQ 750
                 6664...4466677788999*********9999999765414555************98777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (853 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1705  (0.0950973); expected 358.6 (0.02)
Passed bias filter:                      830  (0.0462937); expected 358.6 (0.02)
Passed Vit filter:                       102  (0.00568911); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.88u 0.30s 00:00:01.18 Elapsed: 00:00:00.47
# Mc/sec: 5506.38
//
Query:       EPX73947.1  [L=455]
Description: transcription factor TFIID complex subunit A/SAGA complex subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.6e-34  116.4   2.2    5.6e-34  116.4   2.2    1.9  2  TFIID_20kDa    Transcription initiation factor TFIID subunit 
    0.00017   21.6   0.4    0.00063   19.8   0.0    2.0  2  TFIID-31kDa    Transcription initiation factor IID, 31kD subu
    0.00021   21.5   0.1    0.00043   20.5   0.1    1.5  1  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a
  ------ inclusion threshold ------
      0.015   15.6   0.1      0.015   15.6   0.1    2.5  2  Histone        Core histone H2A/H2B/H3/H4
      0.042   13.2   1.1      0.093   12.1   1.1    1.6  1  IL12           Interleukin-12 alpha subunit


Domain annotation for each model (and alignments):
>> TFIID_20kDa  Transcription initiation factor TFIID subunit A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       2.9     1e+04      11      28 ..     148     165 ..     142     176 .. 0.75
   2 !  116.4   2.2   1.6e-37   5.6e-34       1      68 []     349     416 ..     349     416 .. 0.99

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 2.9
                  CC-SS----HHHHHHHHH CS
  TFIID_20kDa  11 qvdsetkldedvedlLle 28 
                  +  ++++ld   ++ L++
   EPX73947.1 148 ELTTNENLDSTTRETLVK 165
                  566788888888887765 PP

  == domain 2  score: 116.4 bits;  conditional E-value: 1.6e-37
                  -HHHHHHHHHCC-SS----HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SEE-HHHHHHHHHHHS-- CS
  TFIID_20kDa   1 sKrklqdLvqqvdsetkldedvedlLleiaddFvesvtkfacklakhRksdklevrDiqlhlernynm 68 
                  sKrkl+dL+qq+dse++l+++ve+lLleiad+Fvesvt+fac+lakhRksd+l+ +D+qlhlern+n+
   EPX73947.1 349 SKRKLNDLLQQIDSEKHLEPEVEELLLEIADEFVESVTNFACRLAKHRKSDTLDMKDVQLHLERNWNI 416
                  8******************************************************************8 PP

>> TFIID-31kDa  Transcription initiation factor IID, 31kD subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1      0.81   2.9e+03      58      68 ..      62      72 ..      21     118 .. 0.57
   2 !   19.8   0.0   1.8e-07   0.00063      14      72 ..     356     415 ..     349     433 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.81
  TFIID-31kDa 58 vslddvrlAiq 68
                 ++++++r  +q
   EPX73947.1 62 LQAQAIRRQLQ 72
                 34444444333 PP

  == domain 2  score: 19.8 bits;  conditional E-value: 1.8e-07
  TFIID-31kDa  14 iLaslgv.teyeerVvlqLldfayrytssvLedAkvlaehakkkevslddvrlAiqsrle 72 
                  +L+++   +++e++V + Ll++a  ++ sv + A  la+h+k+++++++dv+l ++ + +
   EPX73947.1 356 LLQQIDSeKHLEPEVEELLLEIADEFVESVTNFACRLAKHRKSDTLDMKDVQLHLERNWN 415
                  56665441468******************************************8887766 PP

>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.1   1.2e-07   0.00043      12      63 ..     357     408 ..     350     410 .. 0.91

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 1.2e-07
                    HHCCTTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHH CS
  CBFD_NFYB_HMF  12 mksdpdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehikl 63 
                    +++ ++++ +  ++ el+ e++ ef+e++++ A++++k++k+ t+  ++++l
     EPX73947.1 357 LQQIDSEKHLEPEVEELLLEIADEFVESVTNFACRLAKHRKSDTLDMKDVQL 408
                    677778888999************************************9985 PP

>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.6      0.94   3.4e+03      23      46 ..     108     132 ..      91     165 .. 0.54
   2 ?   15.6   0.1   4.2e-06     0.015      78     126 ..     360     408 ..     347     412 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.94
                 XXXHT.TS-SSSSB--TTT-XTTHH CS
     Histone  23 akker.kasskskkkkkrryrpgtv 46 
                 +++ + + ++++  ++++r  +  +
  EPX73947.1 108 RSRHQlSPQEQTMLVVRHRQLQTAQ 132
                 4444454444444443333333222 PP

  == domain 2  score: 15.6 bits;  conditional E-value: 4.2e-06
                 TSSSXEEXHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTXSEEXHHHHHH CS
     Histone  78 ekedlrisaeavlalqealEallvelfeeAnllakhaKRvTitpkDiql 126
                  ++++ +  e  ++l e++  + ++++  A++lakh+K  T+  kD+ql
  EPX73947.1 360 IDSEKHLEPEVEELLLEIADEFVESVTNFACRLAKHRKSDTLDMKDVQL 408
                 55566677777788999*******************************8 PP

>> IL12  Interleukin-12 alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.1   2.6e-05     0.093      10      81 ..      85     163 ..      80     195 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.6e-05
        IL12  10 lLehlslarslPvatpePsv......akclsasknLlkavsetlqkarekLelysctaeeidheditkdk.tstvkaCl 81 
                 lL++l+   s+P+ tpeP+       ++   + +++l   + +lq+a++ L     t e i  e  t+++  st +  l
  EPX73947.1  85 LLQQLQTNGSFPQRTPEPTAvpprsrHQLSPQEQTMLVVRHRQLQTAQNYLTEMKETHERIKKELTTNENlDSTTRETL 163
                 6888888889999988886544433367777889******************************999865234555443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (455 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1598  (0.0891293); expected 358.6 (0.02)
Passed bias filter:                      511  (0.0285013); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.42
# Mc/sec: 3291.06
//
Query:       EPX73948.1  [L=694]
Description: ABC family iron transporter Atm1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.3e-40  138.5  17.5    4.3e-40  138.1  17.5    1.1  1  ABC_membrane  ABC transporter transmembrane region
    4.2e-35  121.2   0.0    1.6e-34  119.4   0.0    2.0  1  ABC_tran      ABC transporter
    4.8e-05   22.9   0.1     0.0035   16.8   0.0    2.5  2  SMC_N         RecF/RecN/SMC N terminal domain
     0.0003   21.2   0.0     0.0039   17.6   0.0    2.4  1  AAA           ATPase family associated with various cellular 
    0.00034   20.9   0.1     0.0038   17.5   0.1    2.4  2  AAA_22        AAA domain
    0.00065   20.1   0.0     0.0015   19.0   0.0    1.6  1  AAA_16        AAA ATPase domain
     0.0042   17.6   2.9       0.49   10.9   0.0    2.7  3  AAA_23        AAA domain
     0.0046   16.8   0.2      0.041   13.7   0.0    2.2  2  AAA_21        AAA domain, putative AbiEii toxin, Type IV TA s
     0.0089   15.9   0.0      0.025   14.5   0.0    1.7  1  RsgA_GTPase   RsgA GTPase
  ------ inclusion threshold ------
      0.019   14.7   0.3       0.09   12.5   0.0    2.3  3  AAA_24        AAA domain
       0.02   15.0   0.0      0.057   13.5   0.0    1.8  1  MMR_HSR1      50S ribosome-binding GTPase
      0.021   14.6   0.6      0.095   12.4   0.0    2.3  2  AAA_15        AAA ATPase domain
      0.024   14.4   0.0      0.071   12.9   0.0    1.8  1  AAA_29        P-loop containing region of AAA domain
      0.038   14.0   0.0        2.9    7.9   0.0    2.7  2  AAA_14        AAA domain
      0.078   13.1   0.0       0.18   11.9   0.0    1.6  1  AAA_33        AAA domain
      0.083   12.9   0.0       0.48   10.4   0.0    2.2  2  AAA_5         AAA domain (dynein-related subfamily)
      0.087   12.5   0.0       0.48   10.1   0.0    2.2  2  AAA_30        AAA domain
      0.094   12.3   0.0       0.19   11.3   0.0    1.4  1  AAA_25        AAA domain
       0.11   12.8   0.0       0.23   11.7   0.0    1.6  1  AAA_28        AAA domain
       0.12   12.3   0.0        2.3    8.1   0.0    2.4  2  NACHT         NACHT domain
       0.15   12.5   0.2         29    5.1   0.0    3.1  3  AAA_17        AAA domain
        0.2   11.9   1.8        1.6    9.0   0.4    2.7  2  SbcCD_C       Putative exonuclease SbcCD, C subunit


Domain annotation for each model (and alignments):
>> ABC_membrane  ABC transporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.1  17.5   5.3e-43   4.3e-40       2     273 ..     126     402 ..     125     403 .. 0.96

  Alignments for each domain:
  == domain 1  score: 138.1 bits;  conditional E-value: 5.3e-43
                   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS..TCCHH....HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTHHHH CS
  ABC_membrane   2 iliillailagvlsplfplvlgrildtlldk..gdpet....ealnvysllllllglaqfilallqsyllnvtgerlskrlrrklfkkilrqpmsff 92 
                   i +++l+++a+v ++ +p+++++i+dt++++  +  e     + +  + + + l+ ++ +++  l+++++  +++ ++k + + +++++l+++m f+
    EPX73948.1 126 ISALVLLVAAKVFNVQVPFYFKSIIDTMNTTvvN--ELgalwTSVGAVVVGYGLARIFATVFQELRNSVFASVSQSAIKSVSSNVYQHLLNLDMNFH 220
                   56899************************98553..33558888***************************************************** PP

                   HHSCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH.HSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  ABC_membrane  93 dtnsvGellsrltndvsklrdglgeklglffqslltfvgglivmfy.lgwkltlvllailpliilvsaviakilkklkkkeqkavakassvaeEsls 188
                    ++++G+l+  + + +  ++ +l++ +++++   l + ++ +++ y +g++++ +  a++ l+ l+++  +++ + ++++ + a +kas+va+Esl 
    EPX73948.1 221 LSKQTGSLTRAMDRGTKGISFVLSSLVLHIIPITLEIGMVSAILTYkYGVSFAGIAAATVGLYSLFTVKTTSWRTAFRREANAADNKASAVAIESLI 317
                   ************************************************************************************************* PP

                   THHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSTHHHHHHHHHHHHHHHHH CS
  ABC_membrane 189 girtVkafgreeyflekfekaleeakkagikkaianglligitqllgllsyalalwfGttlvisgelsvgdlvvflslfailfga 273
                   +++ Vk f++e+y+l+++ k l  ++ka+i++a + ++l++ + ++++++ +l++w+G+  + s++lsvgdlv++++l  +l+ +
    EPX73948.1 318 NYEAVKTFNNEPYELSRYSKHLSAFEKANIRVASSLAFLNSGQAIIFSTALTLMMWMGCRGIVSSNLSVGDLVMINQLVFQLSIP 402
                   *****************************************************************************99998765 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.4   0.0   1.9e-37   1.6e-34       1     137 []     465     614 ..     465     614 .. 0.95

  Alignments for each domain:
  == domain 1  score: 119.4 bits;  conditional E-value: 1.9e-37
                 EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH................HHHT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................xxxx RF
    ABC_tran   1 lknvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren................esde 83 
                 lkn s+++ +g+kva+vG++G+GKStLl+ll + ++ ++G+i +dg++l++++l+slr  +gv+pq++ lf+++ +  n                ++++
  EPX73948.1 465 LKNCSFNIPAGNKVAFVGPSGCGKSTLLRLLFRFYDADSGKIMIDGQPLTSITLKSLRDAVGVVPQDTPLFNDT-IMYNigygnpkaskeeiiqaAKQA 562
                 79************************************************************************.55555******9999999888888 PP

                 CHHHHHHHSTTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  84 eiekalsklglkelkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137
                 +i+++++++ + +  +t+v++++  +SgG+kqr+a+ r+llk+p++l++DE+t+
  EPX73948.1 563 QIHHIIQSFPDGY--ETKVGERGLMISGGEKQRLAISRLLLKNPEILFFDEATS 614
                 8999999999888..9999*********************************96 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.1     0.053        43      27      42 ..     478     493 ..     465     503 .. 0.81
   2 !   16.8   0.0   4.2e-06    0.0035     109     211 ..     504     658 ..     492     666 .. 0.72

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.053
                 EEEEESTTSSHHHHHH CS
                 xxxxxxxxxxxxxxxx RF
       SMC_N  27 taivGpNGSGKsnlld 42 
                  a vGp G+GKs ll 
  EPX73948.1 478 VAFVGPSGCGKSTLLR 493
                 5779********9985 PP

  == domain 2  score: 16.8 bits;  conditional E-value: 4.2e-06
                 EEEEETTEEE-HHHHHHHHHCTT-STT......................................................CS-HHHHHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxx......................................................xxxxxxxxxxxxxxxxxx RF
       SMC_N 109 seykingkevtkkevsellesagiske......................................................lLSgGektLvalaLlfAi 153
                  +++i+g+  t+  +++l   +g+ ++                                                      ++SgGek+ +a++ l+  
  EPX73948.1 504 GKIMIDGQPLTSITLKSLRDAVGVVPQdtplfndtimynigygnpkaskeeiiqaakqaqihhiiqsfpdgyetkvgerglMISGGEKQRLAISRLL-- 600
                 5666666666666666666666666666777777777777777777777777777777777777999999999999999999*******99988663.. PP

                 HCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTT..SEEEEE-SSHHHCCC-SCEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 154 qkvkpaplyllDeidaaLDeknvkkvaellkekskn..aQfivislreemlekadklvgv 211
                    k   + ++De  +aLD +  k++ + +++  ++     i i++r ++++++d ++ +
  EPX73948.1 601 --LKNPEILFFDEATSALDTSTEKELLQNVNSLIQKsrKTSIFIAHRLRTIKNCDIIYVL 658
                 ..444456779********99988777766644333114568889999999999987755 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   4.7e-06    0.0039       2      96 ..     479     635 ..     478     653 .. 0.77

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 4.7e-06
                 EEESSTTSSHHHHHHHHHHHH..........THEEEEEETTTCSSS..................................................... CS
         AAA   2 llyGppGtGKTllakavakel..........gvefleisgsellsk..................................................... 37 
                  ++Gp G+GK++l + + +            g+++ +i +++l++                                                      
  EPX73948.1 479 AFVGPSGCGKSTLLRLLFRFYdadsgkimidGQPLTSITLKSLRDAvgvvpqdtplfndtimynigygnpkaskeeiiqaakqaqihhiiqsfpdgyet 577
                 699****************9744444444555778888888888669******************************9999999999999999999999 PP

                 ......STTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHT CS
         AAA  38 ......yvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgv 96 
                       ++  + +k r  ++++  k+ p ilf+DE+ +   ++       e+++++   + +++ 
  EPX73948.1 578 kvgergLMISGGEKQRLAISRLLLKN-PEILFFDEATSALDTS------TEKELLQNVNSLIQKS 635
                 99999877777777777777776666.9*********999999......3333333333333333 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.1   4.6e-06    0.0038       9      57 ..     479     522 ..     475     649 .. 0.76
   2 ?    0.9   0.0      0.61     5e+02      39      69 ..     603     637 ..     571     673 .. 0.61

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 4.6e-06
      AAA_22   9 vvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsst..sskdll 57 
                 + +G+sG+GK+tllr l++ +d+       +++ + ++ + +t  ++k+l+
  EPX73948.1 479 AFVGPSGCGKSTLLRLLFRFYDA-------DSGKIMIDGQPLTsiTLKSLR 522
                 579******************96.......555555555555544444433 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.61
      AAA_22  39 rpevvfvtlpsst....sskdllrellralglelk 69 
                 +pe++f++ + s     + k+ll+++ + ++ ++k
  EPX73948.1 603 NPEILFFDEATSAldtsTEKELLQNVNSLIQKSRK 637
                 34444333333333334444445555544443322 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.0   1.8e-06    0.0015      25      52 ..     476     510 ..     468     642 .. 0.67

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 1.8e-06
      AAA_16  25 elvllsGesGvGKsslvrellralekd.......g 52 
                 + v ++G+sG+GKs+l+r l+r + +d       g
  EPX73948.1 476 NKVAFVGPSGCGKSTLLRLLFRFYDADsgkimidG 510
                 56889****************99888843333330 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.2     0.017        13     152     193 ..      53      94 ..      19     100 .. 0.83
   2 !   10.9   0.0    0.0006      0.49      21      39 ..     477     495 ..     462     497 .. 0.80
   3 ?   -2.7   0.1       8.5   6.9e+03     114     127 ..     621     634 ..     551     650 .. 0.64

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.017
      AAA_23 152 kerleelekeleeledekkllekleqekekekeleeleeele 193
                  + l+e++k+++  e+ek+++++ ++ ++ ++ l++++++  
  EPX73948.1  53 VSFLREAQKSTKPVEAEKQFFKASQKDEKIKNGLQKVNSASS 94 
                 45799******************************9998755 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.0006
      AAA_23  21 ltlItGpNGaGKTTildAi 39 
                  ++++Gp G+GK+T+l+ +
  EPX73948.1 477 KVAFVGPSGCGKSTLLRLL 495
                 5689***********9865 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 8.5
      AAA_23 114 ideleqfisellgs 127
                 ++el q++++l+++
  EPX73948.1 621 EKELLQNVNSLIQK 634
                 13333333333333 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.0     5e-05     0.041       3      37 ..     479     503 ..     478     557 .. 0.80
   2 ?    0.4   0.0      0.57   4.7e+02     238     280 ..     587     626 ..     547     643 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 5e-05
      AAA_21   3 vliGpNgsGKSnLLdaldllarldrdvegltdels 37 
                 +++Gp g+GKS+LL++l  + +           +s
  EPX73948.1 479 AFVGPSGCGKSTLLRLLFRFYD----------ADS 503
                 68***************66644..........333 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.57
      AAA_21 238 SdGtkrllalltallralkkgsllliDEpEngLHPkllrrlle 280
                 S G k+ la+  +ll  +    +l++DE  + L+ +  ++ll+
  EPX73948.1 587 SGGEKQRLAISRLLLKNP---EILFFDEATSALDTSTEKELLQ 626
                 888888855555555544...9******999998877777765 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0     3e-05     0.025      99     121 ..     475     497 ..     461     513 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 3e-05
                  TSEEEEECSTTSSHHHHHHHHCT CS
  RsgA_GTPase  99 dktsvlvGqSGvGKStLinallp 121
                  ++ +++vG+SG GKStL+  l  
   EPX73948.1 475 GNKVAFVGPSGCGKSTLLRLLFR 497
                  46789*************99865 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       2.2   1.8e+03      40      78 ..      94     165 ..      35     172 .. 0.65
   2 ?   12.5   0.0   0.00011      0.09       2      56 ..     475     525 ..     474     575 .. 0.77
   3 ?   -2.6   0.0       4.8   3.9e+03     109     131 ..     622     645 ..     618     648 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 2.2
      AAA_24  40 adkfpdieswedfldevvel.................................aaeladyktlviDtidele 78 
                  +k  d++sw  ++d ++++                                 +   ++ +t v+  ++ l+
  EPX73948.1  94 SKKDTDVTSWVIVKDMIQYVwpkgklnlkirvisalvllvaakvfnvqvpfyfKSIIDTMNTTVVNELGALW 165
                 334445556666666666666666666666666666666666666555555555556666666666666655 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 0.00011
      AAA_24   2 klkiliyGpsgiGKTtlakelgpkplfidtekGlksldadkfpdie..swedfldev 56 
                 ++k++ +Gpsg GK+tl++ l   + f d + G   +d+  + +i+  s   ++d+v
  EPX73948.1 475 GNKVAFVGPSGCGKSTLLRLL---FRFYDADSGKIMIDGQPLTSITlkS---LRDAV 525
                 57999****************...99*******9999999999995554...44433 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 4.8
      AAA_24 109 eefrrllkk.lqelrknvifiahe 131
                 +e+ + ++  +q+ rk+ ifiah 
  EPX73948.1 622 KELLQNVNSlIQKSRKTSIFIAHR 645
                 5566666666899999******96 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0     7e-05     0.057       1      28 [.     477     505 ..     477     578 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 7e-05
                 EEEEEESTTSSHHHHHHHHHTS.TEEESS CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltge.kaivsd 28 
                 +va+vG +  GKStL++ l++   a  ++
  EPX73948.1 477 KVAFVGPSGCGKSTLLRLLFRFyDADSGK 505
                 69*****************9844444444 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.1       1.4   1.1e+03     100     127 ..      67      94 ..      32     139 .. 0.55
   2 ?   12.4   0.0   0.00012     0.095      17      50 ..     470     502 ..     465     645 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 1.4
      AAA_15 100 ekkkadlllkkkesdlkktikdkklklk 127
                 e++k+ +   +k++++k+ +++ + + +
  EPX73948.1  67 EAEKQFFKASQKDEKIKNGLQKVNSASS 94 
                 2222222222222222222222222222 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 0.00012
      AAA_15  17 veidlseeltvliGkNnsGKSsilealdlFlnnk 50 
                 + i+  +    ++G+ ++GKS++l++l  F + +
  EPX73948.1 470 FNIPAGN-KVAFVGPSGCGKSTLLRLLFRFYDAD 502
                 5677778.99*****************9998866 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   8.8e-05     0.071      20      39 ..     473     492 ..     465     495 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 8.8e-05
      AAA_29  20 dlkg.atlltGpsGsGKSTll 39 
                   +g  + ++GpsG GKSTll
  EPX73948.1 473 P-AGnKVAFVGPSGCGKSTLL 492
                 4.444899************8 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.0    0.0035       2.9       6      27 ..     479     500 ..     475     540 .. 0.79
   2 ?    2.8   0.0      0.14   1.1e+02      62      97 ..     602     642 ..     573     649 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0035
      AAA_14   6 vitGaRrvGKTtllkqlikell 27 
                 + +G+  +GK+tll+ l++ + 
  EPX73948.1 479 AFVGPSGCGKSTLLRLLFRFYD 500
                 6789************997665 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.14
      AAA_14  62 eekktylflDEiqev......pewekalkslvdegknldviv 97 
                 + + ++lf+DE+  +      +e+ + ++sl++++++  +++
  EPX73948.1 602 K-NPEILFFDEATSAldtsteKELLQNVNSLIQKSRKTSIFI 642
                 3.6789******999999999999999999999988877776 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00023      0.18       2      20 ..     478     496 ..     478     502 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00023
      AAA_33   2 vllvGlpGsGKstlaerll 20 
                 v +vG++G+GKstl++ l 
  EPX73948.1 478 VAFVGPSGCGKSTLLRLLF 496
                 679***********99776 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00059      0.48       2      25 ..     478     501 ..     477     544 .. 0.82
   2 ?   -0.7   0.0       1.6   1.3e+03      63      86 ..     601     625 ..     545     638 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00059
                 EEEE--SSSSHHHHHHHGGGGBS- CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnr 25 
                 v  vGp+G+gKs+l + l +++ +
  EPX73948.1 478 VAFVGPSGCGKSTLLRLLFRFYDA 501
                 5679*************9998843 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 1.6
                 --G-SEEEEESGGG--.HHHHHHHH CS
       AAA_5  63 aregeilvlDEverae.sevlnsLl 86 
                  +++eil++DE + a  +++ ++Ll
  EPX73948.1 601 LKNPEILFFDEATSALdTSTEKELL 625
                 3589999999998876455444444 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       2.4     2e+03      32      64 ..     155     187 ..     153     225 .. 0.78
   2 ?   10.1   0.0   0.00059      0.48      22      68 ..     479     527 ..     473     632 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 2.4
      AAA_30  32 ttalkalreaweaaggrviglAptgkaAkvLae 64 
                 tt++++l ++w++ g  v+g+      A v +e
  EPX73948.1 155 TTVVNELGALWTSVGAVVVGYGLARIFATVFQE 187
                 89999999****999999999888887777665 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00059
      AAA_30  22 vltGpAGtGKttalkalreaweaaggrvi..glAptgkaAkvLaeelgi 68 
                 + +Gp G GK+t+l+ l + ++a+ g+++  g   t+   k L++++g+
  EPX73948.1 479 AFVGPSGCGKSTLLRLLFRFYDADSGKIMidGQPLTSITLKSLRDAVGV 527
                 679**************99999995454423666666666666665554 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00023      0.19      20      50 ..     459     492 ..     445     499 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00023
      AAA_25  20 pprrwlvkg...llpagelallaGapgtGKttla 50 
                  p r ++k+    +pag  ++++G++g+GK+tl+
  EPX73948.1 459 NPSRPILKNcsfNIPAGNKVAFVGPSGCGKSTLL 492
                 44455555533358******************97 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00029      0.23       1      20 [.     477     496 ..     477     509 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00029
      AAA_28   1 kivitGgestGKTtlleaLa 20 
                 k++++G++++GK+tll+ L 
  EPX73948.1 477 KVAFVGPSGCGKSTLLRLLF 496
                 799*************9985 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.0    0.0028       2.3       3      20 ..     478     495 ..     476     502 .. 0.87
   2 ?    1.3   0.1      0.36   2.9e+02      90     133 ..     609     650 ..     589     666 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0028
                 EEEEC-TTTCHHHHHHHH CS
       NACHT   3 vilqGeaGsGKTtLlqkl 20 
                 v+  G++G+GK+tLl+ l
  EPX73948.1 478 VAFVGPSGCGKSTLLRLL 495
                 6789***********966 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.36
                 STT-SS-TCH.........HHHHHCTTTTT--EEEEEEECCCHH CS
       NACHT  90 lDelvtdlgqkekqpvrtlLselirkkllpeasllltvrpralr 133
                 +De+ + l+ ++++++ +  ++li+k   +++s++++ r r+ +
  EPX73948.1 609 FDEATSALDTSTEKELLQNVNSLIQK--SRKTSIFIAHRLRTIK 650
                 799999999999999***********..9999999998877665 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0      0.15   1.2e+02      24      73 ..      50      97 ..      41     134 .. 0.72
   2 ?    5.1   0.0     0.035        29       1      19 [.     481     499 ..     481     512 .. 0.86
   3 ?   -0.2   0.0       1.6   1.3e+03      47      83 ..     614     650 ..     600     666 .. 0.75

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.15
                EEHHHHHHHHHHTTTSHSSHHHHCTSHHHHHHHHHHHHHHHHHHHHHSSE CS
      AAA_17 24 lsaGdllreeakrgglakardemrklpleekkelqkeaaekiaeeakkkg 73
                +s+ + lre +k+ + ++a++++ k++++++k   k+  +k++ +++kk+
  EPX73948.1 50 FSTVSFLREAQKSTKPVEAEKQFFKASQKDEK--IKNGLQKVNSASSKKD 97
                566789**********9999999988755555..4566666666654444 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.035
                 EE-TTSSHHHHHHHHHHHH CS
      AAA_17   1 lGgPGsGKgtqceklveky 19 
                 +G+ G+GK+t+++ l + y
  EPX73948.1 481 VGPSGCGKSTLLRLLFRFY 499
                 79*********98776655 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 1.6
                 CTSHHHHHHHHHHHHHHHHHHHHHSSEEEEEE-SEEE CS
      AAA_17  47 rklpleekkelqkeaaekiaeeakkkgvlvdghprik 83 
                 + l+ + +kel++++   i++ +k++ ++     +ik
  EPX73948.1 614 SALDTSTEKELLQNVNSLIQKSRKTSIFIAHRLRTIK 650
                 4678889999999999999988777777776555554 PP

>> SbcCD_C  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       9.9   8.1e+03      47      87 ..     276     315 ..     273     317 .. 0.73
   2 ?    9.0   0.4     0.002       1.6      22      86 ..     575     626 ..     563     629 .. 0.69

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 9.9
     SbcCD_C  47 aaalaalyssaegrepalrlvfLDEAFsklDeesiatllel 87 
                 aaa + lys    ++++ r+ f  EA + +D++ +a ++e 
  EPX73948.1 276 AAATVGLYSLFTVKTTSWRTAFRREA-NAADNKASAVAIES 315
                 66777777776446888888888888.88898888888875 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.002
     SbcCD_C  22 kekelsrssgtlSGGekqflaylalaaalaalyssaegrepalrlvfLDEAFsklDeesiatlle 86 
                  e+++ ++    SGGekq la          l+       ++++++f+DEA s lD  + ++ll+
  EPX73948.1 575 YETKVGERGLMISGGEKQRLAIS-------RLLL------KNPEILFFDEATSALDTSTEKELLQ 626
                 55555555556666666554333.......3333......3589************999888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (694 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       817  (0.0455686); expected 358.6 (0.02)
Passed bias filter:                      481  (0.026828); expected 358.6 (0.02)
Passed Vit filter:                        83  (0.00462937); expected 17.9 (0.001)
Passed Fwd filter:                        22  (0.00122706); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              22  [number of targets reported over threshold]
# CPU time: 0.69u 0.29s 00:00:00.98 Elapsed: 00:00:00.43
# Mc/sec: 4797.74
//
Query:       EPX73949.1  [L=166]
Description: DASH complex subunit Spc34 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.6e-12   45.8  12.3    2.8e-07   30.6   6.5    2.1  2  DASH_Spc34  DASH complex subunit Spc34
  ------ inclusion threshold ------
      0.047   13.5   0.7      0.067   13.0   0.2    1.5  2  dNK         Deoxynucleoside kinase
       0.05   13.5   3.2      0.043   13.7   2.0    1.5  1  PIN_8       PIN like domain
      0.063   13.2   0.0       0.13   12.1   0.0    1.5  1  RuvB_C      RuvB C-terminal winged helix domain
        1.3    9.5   8.6        1.7    9.1   8.6    1.2  1  AAA_23      AAA domain


Domain annotation for each model (and alignments):
>> DASH_Spc34  DASH complex subunit Spc34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.3     3e-07    0.0011       4      47 ..       7      50 ..       5      54 .. 0.96
   2 !   30.6   6.5   7.8e-11   2.8e-07     161     254 ..      76     157 ..      52     158 .. 0.87

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 3e-07
  DASH_Spc34  4 cLeeikqSveSisslkFkpPgIFtNAlvkkddItkLirDtepee 47
                +L++i+ S e + + + kp   Ft Al+++++I  LirD+e+ee
  EPX73949.1  7 HLNSISASSEKLVESEQKPETRFTDALLHSNSIIDLIRDAEKEE 50
                9****************************************998 PP

  == domain 2  score: 30.6 bits;  conditional E-value: 7.8e-11
  DASH_Spc34 161 lkvleelltkyplleakekieelreeYeelseeieeleaeiaeQkkqLeaqnknesessseddsesetskskdvdelirkEeeeIeeLerklke 254
                 +  +eell+ yp+++ +e +e+l e+Y++  + +e+le    eQk++L+  +++++++             +  ++++++E++eI++Le+++++
  EPX73949.1  76 VACIEELLDIYPMQGGREYLEALVEKYNTHMTALENLETALVEQKDRLQLFDQRQKDQV------------SARENILQRENSEIQRLENEIDK 157
                 4679*********************************************9999887764............456899**************986 PP

>> dNK  Deoxynucleoside kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.4   5.2e+03     162     189 ..      28      55 ..      16      58 .. 0.63
   2 ?   13.0   0.2   1.9e-05     0.067     153     195 ..      92     133 ..      81     148 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.4
                 HHHHHHTSGGCS-EEEEETSS.-TTTHC CS
         dNK 162 kyeewlkklnevpvlvidveeldlvaee 189
                 ++ ++l + n++  l+ d+e+ +l++ e
  EPX73949.1  28 RFTDALLHSNSIIDLIRDAEKEELITTE 55 
                 4555555555555666666666665554 PP

  == domain 2  score: 13.0 bits;  conditional E-value: 1.9e-05
                 HHHHHHHHHHHHHHHTSGGCS.-EEEEETSS.-TTTHCCHHHHH CS
         dNK 153 ldYlekLhekyeewlkklnev.pvlvidveeldlvaeeekredv 195
                 ++Yle+L eky++ ++ l++  ++lv++ ++l+l ++ +  +d 
  EPX73949.1  92 REYLEALVEKYNTHMTALENLeTALVEQKDRLQLFDQRQ--KDQ 133
                 79****************99988*******966544443..333 PP

>> PIN_8  PIN like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   2.0   1.2e-05     0.043      35     114 ..      85     159 ..      65     165 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.2e-05
       PIN_8  35 wvPhqvalEfqrnresviskekkayedlekeleklkkaaekkleealkkwakkkaldteelrkelkkqleelkeel.kael 114
                 ++P+q ++E+ +   +  +++ +a+e+le++l ++k++++     ++++++k++  ++e++ ++ ++++++l++e+ k  +
  EPX73949.1  85 IYPMQGGREYLEALVEKYNTHMTALENLETALVEQKDRLQ-----LFDQRQKDQVSARENILQRENSEIQRLENEIdK-AK 159
                 68******************************88888888.....899999999999999999999999999999932.22 PP

>> RuvB_C  RuvB C-terminal winged helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   3.7e-05      0.13       9      40 ..      92     123 ..      89     126 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 3.7e-05
                 HHHHHHHHHT.TT--B-HHHHHHHTT--HHHH CS
      RuvB_C   9 ikyLkllkekfkggpvglktlaailgeeketi 40 
                 ++yL++l ek++ + ++l++l ++l e+k+ +
  EPX73949.1  92 REYLEALVEKYNTHMTALENLETALVEQKDRL 123
                 79***********************9999876 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   8.6   0.00049       1.7     114     199 ..      54     162 ..       4     163 .. 0.51

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00049
      AAA_23 114 i..deleqfisellgskki......ilnlilflgqerfeefelkdkke...........................rleelekeleeledekkllekl.. 175
                 +  + l + i+e+++s+ +      i                     e                           +le+le++l e++d+ +l++++  
  EPX73949.1  54 TeaASLPKGIQEKYNSESPadqvacI---------------------EelldiypmqggreylealvekynthmtALENLETALVEQKDRLQLFDQRqk 131
                 11122222233333332223333331.....................0333333333333333334444445556******************999987 PP

      AAA_23 176 ......eqekekek.eleeleeeleeilkel 199
                       e+++++e+ e++ le+e+ +++ el
  EPX73949.1 132 dqvsarENILQRENsEIQRLENEIDKAKLEL 162
                 7777774444433348888888888876665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1728  (0.0963802); expected 358.6 (0.02)
Passed bias filter:                      660  (0.0368119); expected 358.6 (0.02)
Passed Vit filter:                        71  (0.00396006); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 1170.98
//
Query:       EPX73950.1  [L=142]
Description: hypothetical protein SOCG_03166 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     0.0098   15.4   1.9      0.012   15.0   1.9    1.2  1  tRNA_lig_CPD  Fungal tRNA ligase phosphodiesterase domain


Domain annotation for each model (and alignments):
>> tRNA_lig_CPD  Fungal tRNA ligase phosphodiesterase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   1.9   6.8e-07     0.012      55     114 ..      47     105 ..      29     122 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 6.8e-07
  tRNA_lig_CPD  55 kkkkkkkkekkekskkkkkkkleYfsvsvptaevnslleslfkeksaseekarlykqlkq 114
                   ++k +  + +++++ +k kkk+ Yf v + ++++++++++ +++k   ++++r +++lk+
    EPX73950.1  47 QAKADPLNFSQQNNIRKRKKKPSYFDVGLFKTQLKNTISHSLRHKGM-NSQKRAITELKE 105
                   333333446789999****************************6665.677788877775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       897  (0.0500307); expected 358.6 (0.02)
Passed bias filter:                      271  (0.0151152); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 1043.41
//
Query:       EPX73951.1  [L=189]
Description: TLDc domain-containing protein 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-27   96.9   0.1    1.4e-27   96.6   0.1    1.1  1  TLD       TLD


Domain annotation for each model (and alignments):
>> TLD  TLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.6   0.1   7.7e-32   1.4e-27       1     138 [.      39     188 ..      39     189 .] 0.95

  Alignments for each domain:
  == domain 1  score: 96.6 bits;  conditional E-value: 7.7e-32
         TLD   1 llyssskdgsslstllekie........nkgptlllikdekkyifGaflsqpwkssnkkfygdsesflfsl...spkfkvykstgknkaylntssdglg 88 
                 +lys ++dg sl+t+++++          kg +ll+ kd ++++fGaf+++ +  + + ++g++esfl+++   +++++ +   g++++++++++++++
  EPX73951.1  39 RLYSLQHDGASLHTMYQNCMkqkeesgnPKGACLLVAKDVHDNVFGAFVDEYLCPRPH-YVGSNESFLWKCfsdNNRLRAFPCVGDSNFVIYCTRSFIA 136
                 59*********************99985559999999****9***********87777.**************999*********************** PP

         TLD  89 fGggqpkfsLwidsslekgtsrhsetfengllsg..aseerfkikdiEVWgl 138
                 +Ggg++++sLwi++++e g+s ++ +f+n++ls+   +++r+ i d+E+W +
  EPX73951.1 137 LGGGNGRYSLWINGTMEYGYSDKTPAFNNSPLSHrsCQNQRIWIVDVELWCI 188
                 ***********************************999************66 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       360  (0.0200792); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.28s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 1308.48
//
Query:       EPX73952.1  [L=686]
Description: translation initiation factor eIF2B epsilon subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      2e-13   50.3   1.4      2e-13   50.3   1.4    3.3  4  W2               eIF4-gamma/eIF5/eIF2-epsilon
    3.4e-13   48.7  22.8    7.5e-07   28.6   3.6    4.0  4  Hexapep          Bacterial transferase hexapeptide (six repea
    6.4e-08   32.5   0.0    1.1e-07   31.7   0.0    1.3  1  NTP_transferase  Nucleotidyl transferase
    3.9e-05   23.3  22.2    0.00074   19.2   6.0    3.7  3  Hexapep_2        Hexapeptide repeat of succinyl-transferase
    0.00014   20.2   3.2    0.00024   19.4   3.2    1.3  1  DUF4954          Domain of unknown function (DUF4954)
    0.00029   21.2   0.0    0.00055   20.3   0.0    1.5  1  NTP_transf_3     MobA-like NTP transferase domain
  ------ inclusion threshold ------
      0.053   12.5   0.3       0.13   11.2   0.3    1.7  1  Fucokinase       L-fucokinase


Domain annotation for each model (and alignments):
>> W2  eIF4-gamma/eIF5/eIF2-epsilon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       1.9     5e+03      29      44 ..     277     292 ..     261     295 .. 0.79
   2 ?   -5.9   5.5         7   1.8e+04      71      79 .]     450     458 ..     448     458 .. 0.87
   3 !   50.3   1.4   7.8e-17     2e-13       1      79 []     597     675 ..     597     675 .. 0.87
   4 ?  -12.2  11.3         7   1.8e+04      71      78 ..     678     685 ..     676     686 .] 0.45

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1.9
          W2  29 aLYdeDileEeailkW 44 
                  L   D ++ ++i +W
  EPX73952.1 277 SLQTYDAISKDVISRW 292
                 5666799999***999 PP

  == domain 2  score: -5.9 bits;  conditional E-value: 7
          W2  71 eaeeeeeee 79 
                 eae+e+eee
  EPX73952.1 450 EAESEDEEE 458
                 899999997 PP

  == domain 3  score: 50.3 bits;  conditional E-value: 7.8e-17
          W2   1 eqvallgalerlcaekeellkllakilkaLYdeDileEeailkWgekkskaekgkkkvrkka.epfvewLeeaeeeeeee 79 
                 eqv+ l  l+++c  + ++ k + ++l  +Y+++i e++a+l+W+++ +++e + + +r+   ++fv+wL++ae+e+eee
  EPX73952.1 597 EQVDNLFTLQKYC-IRLSMDKQFLQLLGFFYQLEIAEDDAVLDWYNDSRSTEGETAVLRNTYgKQFVDWLNTAESESEEE 675
                 699999******9.44568999*************************99988775566554326**************98 PP

  == domain 4  score: -12.2 bits;  conditional E-value: 7
          W2  71 eaeeeeee 78 
                 e+ee++ee
  EPX73952.1 678 EEEEDDEE 685
                 34444444 PP

>> Hexapep  Bacterial transferase hexapeptide (six repeats)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   5.8   1.3e-07   0.00033       8      35 ..     332     364 ..     325     365 .. 0.77
   2 !   12.6   0.5   3.3e-05     0.084      14      29 ..     366     381 ..     364     387 .. 0.84
   3 !   28.6   3.6   2.9e-10   7.5e-07       1      35 [.     371     404 ..     371     405 .. 0.93
   4 !   24.5   2.5     6e-09   1.5e-05       1      29 [.     388     416 ..     388     422 .. 0.90

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 1.3e-07
                 EEE-T.....TEEEETTEEE-TTEEEETTEEEE CS
     Hexapep   8 vlIgp.....faviggnVkIGdnvkIgagvvig 35 
                 +lIg+      a i +n++IG+n++Ig+++ i 
  EPX73952.1 332 TLIGAftkvgDASIVANTVIGRNCIIGNNSNID 364
                 555555555599999***************986 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 3.3e-05
                 EEEETTEEE-TTEEEE CS
     Hexapep  14 aviggnVkIGdnvkIg 29 
                 a + +nVk+Gdn+kIg
  EPX73952.1 366 AFLWENVKVGDNCKIG 381
                 5577899999999998 PP

  == domain 3  score: 28.6 bits;  conditional E-value: 2.9e-10
                 TEEEETTEEE-TTEEEETTEEE-TTEEEETTEEEE CS
     Hexapep   1 stvIGsnvlIgpfaviggnVkIGdnvkIgagvvig 35 
                 ++++G+n++Ig  a+i+++V+IG n++I+ g+ ++
  EPX73952.1 371 NVKVGDNCKIG-KAIIANDVQIGHNCTIEDGAILA 404
                 689********.*******************9875 PP

  == domain 4  score: 24.5 bits;  conditional E-value: 6e-09
                 TEEEETTEEE-TTEEEETTEEE-TTEEEE CS
     Hexapep   1 stvIGsnvlIgpfaviggnVkIGdnvkIg 29 
                 +++IG n++I  +a+++++V+IGdnv + 
  EPX73952.1 388 DVQIGHNCTIEDGAILAAGVIIGDNVSVT 416
                 589***********************885 PP

>> NTP_transferase  Nucleotidyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.7   0.0   4.2e-11   1.1e-07       2     144 ..      21     162 ..      20     167 .. 0.86

  Alignments for each domain:
  == domain 1  score: 31.7 bits;  conditional E-value: 4.2e-11
                      EEEE--S--GGGTTCCTTSSGGGSEETTETETTHHHHHHHHHTT-SEEEEEEETTTHHHHHHHHTTSGGGT.....SEEEEEEESS--BGGHHH CS
  NTP_transferase   2 avILaGGsGtRLwPLtrtlakklvpvlgkerliqatlsrlansgieeiivvltqehsflveeqlkegskfg.....vevlialepegkgtAdAv 90 
                      a++L+  +  R++PLt + +  l+p +++ +li++t++ la +g++e ++v    h+  ++ ++++ + ++      +v  ++ +e+    dA+
       EPX73952.1  21 AIVLSDSYNYRFRPLTLDKPRCLLPLANT-PLIEYTFEFLALAGVQE-VYVFCCAHADQIRAYIENSK-WNlasspFSVHTIVSRESLSVGDAL 111
                      5677777778*******************.*****************.888888999*******9885.888999999**************** PP

                      HHTHHHHTTSSE..EEEEETTEEEESTTHHHHHHHHHTHSSTTSEEEEEEESS- CS
  NTP_transferase  91 alaaelledeksdelvlvLggDhlikdayeeavkkaiekaakgtvtfgivpvee 144
                      +        +++   ++ ++gD++ +  +++++++++++++  + +++++ v+e
       EPX73952.1 112 RELDSKQLITSD---FILVSGDVVSNIPLKDVLEEHRARREVDKNAIMTMVVRE 162
                      *99888877775...8999*******************9996555555544444 PP

>> Hexapep_2  Hexapeptide repeat of succinyl-transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.0   6.2    0.0019         5      18      30 ..     349     361 ..     329     365 .. 0.59
   2 !   19.2   6.0   2.9e-07   0.00074       2      27 ..     349     381 ..     348     382 .. 0.93
   3 !   10.5  10.3   0.00015      0.38       1      32 [.     371     403 ..     371     422 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0019
                 EEE-TT-EE-TT- CS
   Hexapep_2  18 vslGdncvvgaGv 30 
                 + +G+nc++g+++
  EPX73952.1 349 TVIGRNCIIGNNS 361
                 5555555555554 PP

  == domain 2  score: 19.2 bits;  conditional E-value: 2.9e-07
                 EEE-TT-EE-TT-EE.S......EEE-TT-EE- CS
   Hexapep_2   2 viIGdnCliGanagi.G......vslGdncvvg 27 
                 + IG nC+iG n+ i G      v++Gdnc++g
  EPX73952.1 349 TVIGRNCIIGNNSNIdGaflwenVKVGDNCKIG 381
                 79*************97999999********97 PP

  == domain 3  score: 10.5 bits;  conditional E-value: 0.00015
                 .EEE-TT-EE-TT-EE..SEEE-TT-EE-TT-EE CS
   Hexapep_2   1 pviIGdnCliGanagi..GvslGdncvvgaGvvi 32 
                 +v++GdnC iG+ a+i   v++G nc+++ G ++
  EPX73952.1 371 NVKVGDNCKIGK-AIIanDVQIGHNCTIEDGAIL 403
                 699********7.666689999999999877654 PP

>> DUF4954  Domain of unknown function (DUF4954)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   3.2   9.5e-08   0.00024     175     278 ..     339     404 ..     315     426 .. 0.51

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 9.5e-08
     DUF4954 175 eigekvkilnaglikNvkigdyatiegasklengtinSskeapveiGegViledfiissGskikdgavisrcfvGqavklkkqfsaedsllfaNcqgen 273
                 ++g+                                       + + + Vi +++ii + s+i  + + +++ vG ++k++k   a+d  ++ Nc++e 
  EPX73952.1 339 KVGDA--------------------------------------SIVANTVIGRNCIIGNNSNIDGAFLWENVKVGDNCKIGKAIIANDVQIGHNCTIED 399
                 23333......................................33444455555555555555555555555555555555555555555555555555 PP

     DUF4954 274 gEava 278
                 g ++a
  EPX73952.1 400 GAILA 404
                 44433 PP

>> NTP_transf_3  MobA-like NTP transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   2.1e-07   0.00055      14      83 ..      39     114 ..      31     219 .. 0.72

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 2.1e-07
                   TTHHHHCCCCCCHHHHHHHHHCTT.-CEEEEECSH..CHHHHHHTTCTS-EEE-TTSS-....SHHHHHHHHHHHH CS
  NTP_transf_3  14 gdKallplggkpllervldalraagvdevvvvggd..eevlaalarlgvrvvededpgk....gplaslaaalraa 83 
                   ++ +llpl+++pl+e++++ l+ agv+ev+v +++  ++++a+++ +++ +++ + +        + s+  alr++
    EPX73952.1  39 KPRCLLPLANTPLIEYTFEFLALAGVQEVYVFCCAhaDQIRAYIENSKWNLASSPFSVHtivsRESLSVGDALREL 114
                   5889****************************87755799999999888887777653301113334566666655 PP

>> Fucokinase  L-fucokinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.3   5.1e-05      0.13     268     328 ..     338     401 ..     302     427 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 5.1e-05
  Fucokinase 268 ekkkesavvinSvlessvsvgegsviehsslkgnvsigsnsivsglelessee...slelpddt 328
                 +k  + ++v+n+v+  ++ +g++s i    l +nv++g n+ +    ++++ +   ++++ d  
  EPX73952.1 338 TKVGDASIVANTVIGRNCIIGNNSNIDGAFLWENVKVGDNCKIGKAIIANDVQighNCTIEDGA 401
                 3347788899999999999999999999999999999999988666666544444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (686 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       670  (0.0373696); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.61u 0.30s 00:00:00.90 Elapsed: 00:00:00.44
# Mc/sec: 4642.85
//
Query:       EPX73953.1  [L=543]
Description: transcription factor Prr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.6e-30  104.9   1.5    5.7e-30  103.8   1.5    1.6  1  HSF_DNA-bind  HSF-type DNA-binding
      2e-21   76.2   0.2    3.8e-21   75.4   0.2    1.5  1  Response_reg  Response regulator receiver domain
  ------ inclusion threshold ------
        0.1   13.0   0.0       0.25   11.9   0.0    1.7  1  Ets           Ets-domain


Domain annotation for each model (and alignments):
>> HSF_DNA-bind  HSF-type DNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.8   1.5   9.6e-34   5.7e-30       1      96 []      10     109 ..      10     109 .. 0.93

  Alignments for each domain:
  == domain 1  score: 103.8 bits;  conditional E-value: 9.6e-34
                   HHHHHHHHHCT...TTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSB.TTB--TTSEEEEESS--XXXXXXXXXX CS
  HSF_DNA-bind   1 FlkkLyklled...eelisWsedgksfvvkdkeefakevlpkyfkhsnfssFvrqLnlYgFrkvkrkee.kkkkkskvweFshenFkrgkpelLkki 93 
                   F++kL+++le+   +++++Ws++g+sf+v d++ef+k++lp++fkhsnf+sFvrqLn Y+F+kv++++   +   +  weF+h+ F+ ++++lL++i
    EPX73953.1  10 FVRKLFNMLEEpeyRHILRWSDTGDSFIVLDTNEFTKTILPRHFKHSNFASFVRQLNKYDFHKVRNEDGaPSVYGEGAWEFRHDDFQLHHKDLLDNI 106
                   9********98888999**********************************************9866555667778899****************** PP

                   XXX CS
  HSF_DNA-bind  94 krk 96 
                   krk
    EPX73953.1 107 KRK 109
                   **7 PP

>> Response_reg  Response regulator receiver domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.4   0.2   6.3e-25   3.8e-21       1     111 [.     373     482 ..     373     483 .. 0.98

  Alignments for each domain:
  == domain 1  score: 75.4 bits;  conditional E-value: 6.3e-25
                   EEEESSSHHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHESEEEEESSCSSSEHHHHHHHHHHCTTTSEEEEEESSTSHHHHHHHHHCTESEE CS
  Response_reg   1 vlivdDdplvrellrqlleeegyeevaeaedgkealellkeekvdlillDinmpgmdGlellkeireedpelpviiltahseeedavealkagaddf 97 
                   +l+v+Dd++ r+ + ++l+  ++ ++++a dg +a++++++  +dlil+D  +p++dGl ++  ir+ d+++p++++t+  +++dav++++ g+ d 
    EPX73953.1 373 ILLVEDDEVSRRMTINFLTLFDC-QIEVAVDGISAVNKANSGGYDLILMDFILPQLDGLSVTCLIRQYDQNTPIVAITSSISMDDAVNYFNHGVTDL 468
                   89*********************.************************************************************************* PP

                   EESSG-HHHHHHHH CS
  Response_reg  98 lsKpfdpeeLlkal 111
                   l+Kpf+++ Ll+++
    EPX73953.1 469 LVKPFTKSSLLQIM 482
                   *********99875 PP

>> Ets  Ets-domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   4.1e-05      0.25       6      60 ..      14      66 ..       9      83 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 4.1e-05
         Ets  6 llelLedpskssiiaWtdkeegeFklvdpeevarlWgkrknkpkmnyeklsralR 60
                l+++Le+p++++i++W d  + +F ++d++e+++    r   ++ n+ ++ r+l 
  EPX73953.1 14 LFNMLEEPEYRHILRWSDT-GDSFIVLDTNEFTKTILPRH-FKHSNFASFVRQLN 66
                6789*************88.9**********998755443.33556666666664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (543 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       472  (0.0263261); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.45
# Mc/sec: 3609.29
//
Query:       EPX73954.1  [L=303]
Description: iron ion transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.9e-61  204.0   5.9    1.1e-21   76.6   0.2    3.0  3  Mito_carr        Mitochondrial carrier protein
     0.0023   17.1   0.4        1.8    7.6   0.0    2.9  3  Serine_protease  Gammaproteobacterial serine protease


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.6   0.2   1.2e-25   1.1e-21       3      94 ..      17     107 ..      15     110 .. 0.94
   2 !   55.6   0.1   4.2e-19   3.8e-15       6      92 ..     114     195 ..     109     199 .. 0.93
   3 !   74.3   0.1   6.3e-25   5.6e-21       4      95 ..     203     296 ..     200     298 .. 0.90

  Alignments for each domain:
  == domain 1  score: 76.6 bits;  conditional E-value: 1.2e-25
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
   Mito_carr   3 lsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlll 94 
                  +++++llaG+++g+++++v++P+d +Ktr+q+ ++ s++++ + ++  ++ki  +eG+ +l+rG++  +++  p++a++f++ e++k  ++
  EPX73954.1  17 SPMYAHLLAGAFSGILEHSVMYPVDAIKTRMQMLNGVSRSATGN-VMASVYKIGSNEGIFSLWRGISSVIMGAGPSHAIYFSVLEMFKSKFN 107
                 6899*********************************9987755.999****************************************9997 PP

  == domain 2  score: 55.6 bits;  conditional E-value: 4.2e-19
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   6 lkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrl 92 
                 l + laG++a +++  ++tP+dv+K r+q+  +++k+      l++  ++++ eG++++y  +  ++ +++p++a+++++y++   +
  EPX73954.1 114 LITALAGACAITISDAFMTPFDVIKQRMQLPTTNYKS-----PLQCALTLLRREGVSAFYISYPTSIAMSIPYTAIQVGTYDVAMSI 195
                 56789*****************************999.....9***************************************98765 PP

  == domain 3  score: 74.3 bits;  conditional E-value: 6.3e-25
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCS..STTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkks..skksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                 ++++++++Gg++ga+a+++ttPldvvKt lqt ++s  ++ ++ ++ l++++ iy   G+ ++++G+ p+++ ++pa+a+ +++ye  k+++ +
  EPX73954.1 203 NPVSHIISGGVSGAIAASLTTPLDVVKTLLQTRGSStiQQVKECKGSLNAIRVIYNFGGVPAFFKGIKPRVIVSMPATAVSWAAYEAGKEIFSQ 296
                 6899****************************88882234444445*******************************************99975 PP

>> Serine_protease  Gammaproteobacterial serine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.0   0.00039       3.5     167     200 ..      13      46 ..       5      65 .. 0.85
   2 ?   -1.6   0.0      0.13   1.2e+03      19      41 ..     129     151 ..     103     188 .. 0.63
   3 !    7.6   0.0   0.00021       1.8     174     198 ..     205     229 ..     192     279 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.00039
  Serine_protease 167 lkindelynkllaGalsGviAtvlttifnsykDk 200
                      l+ n  +y++llaGa sG++   + +++ + k +
       EPX73954.1  13 LPENSPMYAHLLAGAFSGILEHSVMYPVDAIKTR 46 
                      6778999*************99999999887765 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.13
  Serine_protease  19 altsPfkalLtnlqkdgsvlpsa 41 
                      a+  Pf ++  ++q   +  +s 
       EPX73954.1 129 AFMTPFDVIKQRMQLPTTNYKSP 151
                      34445555555555544444443 PP

  == domain 3  score: 7.6 bits;  conditional E-value: 0.00021
  Serine_protease 174 ynkllaGalsGviAtvlttifnsyk 198
                      + ++++G +sG+iA+ ltt++   k
       EPX73954.1 205 VSHIISGGVSGAIAASLTTPLDVVK 229
                      5799***************998664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (303 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       369  (0.0205812); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 2120.65
//
Query:       EPX73955.1  [L=59]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.2e-20   71.0   5.9    6.1e-20   70.8   5.9    1.1  1  DUF5310   Family of unknown function (DUF5310)


Domain annotation for each model (and alignments):
>> DUF5310  Family of unknown function (DUF5310)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.8   5.9   3.4e-24   6.1e-20       1      43 [.       2      44 ..       2      45 .. 0.96

  Alignments for each domain:
  == domain 1  score: 70.8 bits;  conditional E-value: 3.4e-24
     DUF5310  1 lpnLRrIFaesrteeeerslSRkAFFqllgFlgscvviSlvaq 43
                lpnLRrIFa++rte+eers+SR+AFF+++g+++ +v++Sl+ +
  EPX73955.1  2 LPNLRRIFASFRTEKEERSYSRTAFFHFIGYISFSVIFSLLVR 44
                79**************************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (59 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.29s 00:00:00.65 Elapsed: 00:00:00.44
# Mc/sec: 401.35
//
Query:       EPX73956.1  [L=84]
Description: BolA domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.7e-17   61.5   0.0    2.3e-16   59.8   0.0    1.6  1  BolA      BolA-like protein


Domain annotation for each model (and alignments):
>> BolA  BolA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.8   0.0   1.3e-20   2.3e-16       1      76 []      11      77 ..      11      77 .. 0.93

  Alignments for each domain:
  == domain 1  score: 59.8 bits;  conditional E-value: 1.3e-20
        BolA  1 LtealkpehlevedeShkhaghaeaggetHFkvvivseaFegkslvarhRlvyalLkeelakgiHALslktktpee 76
                ++++l+p+h+e++d S         g+++ F v+ivs+ Fegk+++arhR v++ L+e +++ +HA++ k++tp++
  EPX73956.1 11 IKSKLQPTHVEIQDLSG--------GCGQNFVVTIVSPLFEGKPTLARHRFVNHELDEVVKQ-VHAFTQKCYTPAQ 77
                67899999999999984........67888******************************99.***********86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       348  (0.0194099); expected 358.6 (0.02)
Passed bias filter:                      288  (0.0160634); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 613.63
//
Query:       EPX73957.1  [L=151]
Description: ribosome biogenesis protein Rrp14-N [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.6e-09   35.9   1.0    8.6e-09   35.9   1.0    2.9  2  RRP14            60S ribosome biogenesis protein Rrp14
  ------ inclusion threshold ------
       0.47   10.3  19.4       0.51   10.2  19.4    1.0  1  SRP-alpha_N      Signal recognition particle, alpha subunit, 
        3.9    6.4  18.3        4.5    6.2  18.3    1.0  1  Paf1             Paf1
        7.2    6.8   7.7        3.6    7.8   2.2    2.2  2  UPF0767          UPF0767 family


Domain annotation for each model (and alignments):
>> RRP14  60S ribosome biogenesis protein Rrp14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.9   1.0   1.9e-12   8.6e-09       1      58 [.       7      53 ..       7      55 .. 0.69
   2 ?   -4.7  17.4         4   1.8e+04      29      54 ..     115     139 ..      60     145 .. 0.78

  Alignments for each domain:
  == domain 1  score: 35.9 bits;  conditional E-value: 1.9e-12
       RRP14  1 rLeahnkfFdsLlslIPakfYlpkdeeeednskklkkqkkkkakkqtkeeskkaKraK 58
                r+++ n+ F++Lls+IPak+Y+++++          +q+k+  kk + ee+k+ ++ K
  EPX73957.1  7 RIHGWNDRFEELLSFIPAKLYYRAET---------ANQWKQ--KKSSSEEKKERRKMK 53
                68899******************663.........234444..444455555555544 PP

  == domain 2  score: -4.7 bits;  conditional E-value: 4
       RRP14  29 ednskklkkqkkkkakkqtkeeskka 54 
                  +n   +kkq+kk + ++ k++skk+
  EPX73957.1 115 ASNL-DQKKQNKKVSTEEKKAASKKK 139
                 2233.467777777777777777764 PP

>> SRP-alpha_N  Signal recognition particle, alpha subunit, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2  19.4   0.00011      0.51      90     226 ..      11     145 ..       1     150 [. 0.31

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00011
                  HHHHHHHHHHHHXXXXXXXXX........XXX..XXXXXXXXXX.....XX.XX...............XX.XXXXX...XXXXXXXXXX.XXXXXXX CS
  SRP-alpha_N  90 FdeyFdqllrelEasaeaakkskaakepkamksfeeskkskktvksskedkkpe....gkkkkgakkekda.sddstpsatpetsrpstp.sglltak 181
                  +++ F++ll+ + a+   ++++ ++   k++ks  e+kk+     ++k +   +    +++++++ +++++ s+ +++ +++e+s ++ +   +  +k
   EPX73957.1  11 WNDRFEELLSFIPAKLYYRAETANQ--WKQKKSSSEEKKE---RRKMKFSL--DgfndEEQSQNEGSRPPNwSSGKNEGEDNEESGRRAEsMSQIRGK 101
                  7788887774444443322221111..1111111111111...11111111..011111222222222222533333333333333322212233444 PP

                  .XXX.XXXXXXXXXXXXX..X..XXXXXXXXXXX....XXXXXXX.. CS
  SRP-alpha_N 182 eagptaedvsrrarkkan..kkrssagassgdeakasksskkkkkkp 226
                   a++  +d+ ++++ + n  +k++++++s +++++ask++++kk+ +
   EPX73957.1 102 LASR-IQDMREKRK-ASNldQKKQNKKVSTEEKKAASKKKSPKKQ-S 145
                  2333.344333333.333333333333444444443333333332.2 PP

>> Paf1  Paf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2  18.3     0.001       4.5     319     421 ..      36     138 ..      14     148 .. 0.58

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.001
        Paf1 319 LrkrRkkeeeeskkdklvvklrelneeelkarekrese.fdpleeekeeeeeeeeeeeeekseeeeekeeekeeaeeeseaeseeessdeeeeeaksel 416
                  ++++ + ee+++ +k++++l+ +n+ee+ + e  +       ++e+e++ee  + +e+  s+   +  ++ ++ +e+++a++ ++++++++ + ++++
  EPX73957.1  36 WKQKKSSSEEKKERRKMKFSLDGFNDEEQSQNEGSRPPnWSSGKNEGEDNEESGRRAESM-SQIRGKLASRIQDMREKRKASNLDQKKQNKKVSTEEKK 133
                 45555556566999**************99998777550455556666666666666666.44444444444444444444444444444422222222 PP

        Paf1 417 kesse 421
                  +s++
  EPX73957.1 134 AASKK 138
                 22221 PP

>> UPF0767  UPF0767 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.3     0.048   2.1e+02      40      57 ..      37      53 ..      26      72 .. 0.65
   2 ?    7.8   2.2    0.0008       3.6      43      77 ..     103     137 ..      89     142 .. 0.80

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.048
     UPF0767 40 tpyeksisekReeRllee 57
                ++ +ks se+++eR+  +
  EPX73957.1 37 KQ-KKSSSEEKKERRKMK 53
                33.566666666665443 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0008
     UPF0767  43 eksisekReeRlleeelnkdvtqveslkekkfvpk 77 
                    i++ Re+R++++  +k  ++  s++ekk ++k
  EPX73957.1 103 ASRIQDMREKRKASNLDQKKQNKKVSTEEKKAASK 137
                 4579***********99998888888888877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2830  (0.157845); expected 358.6 (0.02)
Passed bias filter:                      619  (0.0345251); expected 358.6 (0.02)
Passed Vit filter:                        87  (0.00485247); expected 17.9 (0.001)
Passed Fwd filter:                        20  (0.00111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.42
# Mc/sec: 1075.62
//
Query:       EPX73958.1  [L=293]
Description: hypothetical protein SOCG_03174 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.083   12.2   0.3       0.16   11.2   0.0    1.6  2  Radial_spoke_3  Radial spoke protein 3


Domain annotation for each model (and alignments):
>> Radial_spoke_3  Radial spoke protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0      0.19   3.3e+03     208     258 ..      72     122 ..      58     142 .. 0.64
   2 ?   11.2   0.0   9.1e-06      0.16      36      86 ..     195     243 ..     186     247 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 0.19
  Radial_spoke_3 208 aekiaaralakqylaellpsvlesLedsgyfydpverdveteflpwLmeev 258
                     +e+  + ++ +q  a+l ++v+ s ++s +  d+ ++ v+ ++  +L++ +
      EPX73958.1  72 SEQSLSLSYFSQSYAQLFKHVYYSDSRSMTEADEAQAIVTFTIGSYLYKCT 122
                     445555555555556677777776666666677776666666666666655 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 9.1e-06
  Radial_spoke_3  36 aearrrklarkkakeqaerellktPepvegrkhidvqteeyLeeltdkiee 86 
                     a ++++++a  + ++q++r  ++tP+++++r+++d+  +++L+ lt+ ++e
      EPX73958.1 195 ATPSPQQVAVDDIVQQKNR--KSTPREIRTREDVDIIRDKFLQLLTECPDE 243
                     5567778888888888888..59**********************999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       697  (0.0388756); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2205.18
//
Query:       EPX73959.1  [L=203]
Description: 40S ribosomal protein S5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.3e-35  122.3   1.6    1.6e-35  122.0   1.6    1.1  1  Ribosomal_S7  Ribosomal protein S7p/S5e


Domain annotation for each model (and alignments):
>> Ribosomal_S7  Ribosomal protein S7p/S5e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.0   1.6   8.7e-40   1.6e-35      16     149 .]      61     203 .]      50     203 .] 0.94

  Alignments for each domain:
  == domain 1  score: 122.0 bits;  conditional E-value: 8.7e-40
                   SSTTSBHHHHHHHHHSB....TTBHHHHHHHHHHHHHHHHHHHSS-HHHHHHHHHHHCS-SEEEEEEBSSSSBEEEEEEE-HHHHHHHHHHHHHHHH CS
  Ribosomal_S7  16 pkynselveklinklmk....dGkkslAekivygaldiieektkkdplevleeAlenvkPrvevksrrvGGatyqvpvevrpkRrqalAlrwiieaa 108
                    k+++ + e+l+n lm+    +Gkk lA +iv++a++ii+  t+++pl++l++A+  + Pr++ +++   G+  +++v+v+p Rr+++A+  i+ +a
    EPX73959.1  61 RKARCFIAERLTNSLMMngrnNGKKLLATRIVKHAFEIIALLTDQNPLQILVDAVAACGPREDSTRIGSAGTVRRQAVDVSPLRRVNQAVALITIGA 157
                   45788899*********99999************************************************************************999 PP

                   ...STSSSS-HHHHHHHHHHHHHTT-..SHHHHHHHHHHHHHHHTG CS
  Ribosomal_S7 109 ...rkrkeksmaekLaeElidAaege..gaavkkreethrmAeanr 149
                      ++r+ ks++e+LaeE+i+Aa+g+  ++a+kk++e++r+A++nr
    EPX73959.1 158 reaAFRNVKSISECLAEEIINAAKGSsnSYAIKKKDELERVAKSNR 203
                   88899********************9899****************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       416  (0.0232026); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1573.02
//
Query:       EPX73960.1  [L=142]
Description: rRNA processing protein Fyv7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-21   77.1  34.5    1.4e-20   73.8  34.5    1.9  1  rRNA_processing  rRNA processing
  ------ inclusion threshold ------
        1.2    8.4  17.7        1.5    8.2  17.7    1.2  1  GBP_C            Guanylate-binding protein, C-terminal domain
        6.6    6.5   5.6        8.3    6.2   5.6    1.1  1  VIT1             VIT family
        9.6    4.8  10.1         10    4.7  10.1    1.0  1  Presenilin       Presenilin


Domain annotation for each model (and alignments):
>> rRNA_processing  rRNA processing
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.8  34.5   3.2e-24   1.4e-20       2     148 .]       9     139 ..       8     139 .. 0.89

  Alignments for each domain:
  == domain 1  score: 73.8 bits;  conditional E-value: 3.2e-24
  rRNA_processing   2 kknkkkftd.key....kskeikkeltrkarlrkeYfKllkkegleeeekvakeaekskneeeeskkskkeareeeeklkfkerkeivkerkee 90 
                      +k+ +kf+   e     k+k+ik++l  ka+ +k+++K++k ++++++++              +++++k a++       k++ e+++e +ee
       EPX73960.1   9 RKGGFKFRAlPEHayqgKAKKIKQDLILKAKTKKHFYKTVKPDEYRKKKT--------------EEDTSKPAPK-------KNHLEKLYEMSEE 81 
                      57788999988844599*****************************9966..............3345555544.......578999999999* PP

  rRNA_processing  91 kreekleavqeklerikalekkkkerekrkkkLskkTkkGQPvMgprienLLdKIkkd 148
                      kr++k+e + +k+++++++e+k ++r +++k+Lsk+Tk+GQPvM++ ++ LL+K+kk+
       EPX73960.1  82 KRKRKEEMIHQKQKKKEEHERKIHDRIETRKQLSKRTKHGQPVMKNHVSHLLSKVKKE 139
                      *********99999999***************************************96 PP

>> GBP_C  Guanylate-binding protein, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2  17.7   0.00033       1.5     172     262 ..      30     118 ..      14     140 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00033
       GBP_C 172 vkaeevLqeflkskeaveeailqtdkaltakekeieaeqakaeaaeaekelleekqkeeeqrmeakeksleehvkqLkekleeerekllee 262
                 +k + +L+   k k+   +++   +   +++e    +   k++ +e+  e+ eek+k++e+++ +k+k+ eeh +++++++e+ ++  ++ 
  EPX73960.1  30 IKQDLILKA--KTKKHFYKTVKPDEYRKKKTEEDTSKPAPKKNHLEKLYEMSEEKRKRKEEMIHQKQKKKEEHERKIHDRIETRKQLSKRT 118
                 444555553..556666677777777777888888889999*****************************************999844333 PP

>> VIT1  VIT family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   5.6    0.0018       8.3      56     134 ..      38     123 ..      36     134 .. 0.65

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0018
        VIT1  56 vkserdlekaerkreeeeleedpe.eg...eaeelaeilearglseelaqevaaellknpdalle.lmlreelg..psaseelasp 134
                 +k+++ ++k+ +++e ++ +++++ ++   ++++l++++e  + ++++++e++ + +k++++ ++ ++ r e    +s+++++ +p
  EPX73960.1  38 AKTKKHFYKTVKPDEYRKKKTEEDtSKpapKKNHLEKLYEMSEEKRKRKEEMIHQKQKKKEEHERkIHDRIETRkqLSKRTKHGQP 123
                 67778888888888777777666433333348***********9999999999888886665433255554443334444444445 PP

>> Presenilin  Presenilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7  10.1    0.0023        10     207     298 ..      27     120 ..      15     141 .. 0.39

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.0023
  Presenilin 207 neeifpaLiYsatvvvlaaeek.....kaevaeseeeeeaekkkeeasesskeeeseeesseksaqsseseeeseeesseaessaeesseekesees 298
                  ++i   Li +a+++    ++      +++++e+++++ a kk++ ++ ++ +ee++++++e ++q   +++++ee++++ +++ e++++ ++++++
  EPX73960.1  27 AKKIKQDLILKAKTKKHFYKTVkpdeyRKKKTEEDTSKPAPKKNHLEKLYEMSEEKRKRKEEMIHQ---KQKKKEEHERKIHDRIETRKQLSKRTKH 120
                 555555566666555443333223222222222333333333333333333333333333333333...3333333333333333333333332222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3327  (0.185565); expected 358.6 (0.02)
Passed bias filter:                      621  (0.0346366); expected 358.6 (0.02)
Passed Vit filter:                        80  (0.00446204); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 1060.33
//
Query:       EPX73961.1  [L=950]
Description: translation regulator [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.7e-07   28.9   2.2     0.0092   15.4   0.1    2.8  3  PPR_long  Pentacotripeptide-repeat region of PRORP
  ------ inclusion threshold ------
      0.035   14.3   1.2         16    5.8   0.0    4.3  5  PPR_2     PPR repeat family
      0.046   13.4   0.3       0.16   11.7   0.3    2.0  1  TPR_11    TPR repeat
      0.068   13.3   1.6        2.6    8.2   0.0    3.7  4  PPR_3     Pentatricopeptide repeat domain


Domain annotation for each model (and alignments):
>> PPR_long  Pentacotripeptide-repeat region of PRORP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.1   1.9e-05     0.083      40     138 ..     279     383 ..     271     423 .. 0.84
   2 !   15.4   0.1   2.1e-06    0.0092      71     158 ..     458     545 ..     419     566 .. 0.78
   3 ?   -3.4   0.0       1.2   5.2e+03     128     147 ..     702     721 ..     695     723 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.9e-05
                 SSS---HHHHHHHHHHHHHC.HCSTT..THHHHHHHHHHHHHHHHH..TT----HHHHHHHHHHHHHT..T-HHHHHHHHHHHHHH-S---HHHHHHHH CS
    PPR_long  40 egvrlaqyhynvllylcskaeaases..kknkalargfevfeamka..kgvspnEatvtalarlaaak..edgdlafelvkemekagvsPrLRsyaPaL 132
                 + v+l++ ++n + ++ s  ++   +  +++++ +++ +v+++++a  ++v++n  ++  l ++++a+   + d      +++ k+g  P L  ++ +L
  EPX73961.1 279 KVVALSHEIFNKFSWIASGPTRLLMNsyHQQSQFNAAVQVYREASArnEAVDSNPVVLRELLKVITAAdyYNRDSFQCFLQTLLKMGYIPSLQVFSRLL 377
                 4489999********99998854332237788999*******99987799**************9998344677777789999**************** PP

                 HHHHHT CS
    PPR_long 133 aaycka 138
                 +a  k 
  EPX73961.1 378 TAVAKY 383
                 998775 PP

  == domain 2  score: 15.4 bits;  conditional E-value: 2.1e-06
                 HHHHHHHHHHHHHTT----HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH-S---HHHHHHHHHHHHHTT-HHHHHHHHHHHHHCT--- CS
    PPR_long  71 largfevfeamkakgvspnEatvtalarlaaakedgdlafelvkemekagvsPrLRsyaPaLaayckagdadkaleveehlkasgvel 158
                 ++ +    +a +++++  nE+t+ + + l + ++d d  +++ k ++  gvs     ya +L ay +a d +k     ++++  g++ 
  EPX73961.1 458 ASMAVSLLRAFRNDTSLINESTLVSCVTLFSRRKDLDAMEKVYKYITDLGVSTPPEGYAALLDAYIEAADEKKIQSCLQKIEELGITK 545
                 334455666777889999**********************************999******************999999888888765 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 1.2
                 HHHHHHHHHHTT-HHHHHHH CS
    PPR_long 128 yaPaLaayckagdadkalev 147
                 ++P++  y+ +gd+ ka +v
  EPX73961.1 702 FSPLIREYTSLGDMTKAKNV 721
                 89**************9877 PP

>> PPR_2  PPR repeat family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       2.6   1.2e+04      10      31 ..     193     214 ..     192     214 .. 0.86
   2 ?    3.7   0.0     0.016        70       9      33 ..     302     326 ..     301     332 .. 0.85
   3 ?   -1.6   0.0       0.7   3.1e+03      13      36 ..     487     510 ..     482     536 .. 0.72
   4 ?    5.8   0.0    0.0035        16       5      31 ..     584     610 ..     583     623 .. 0.87
   5 ?   -2.5   0.0       1.4   6.2e+03      28      39 ..     831     842 ..     829     845 .. 0.77

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 2.6
       PPR_2  10 IsglckkgkveeAfklfneMkk 31 
                 +s +++ +++e  f l+  M k
  EPX73961.1 193 MSFFLHLNMPEYVFHLYVHMPK 214
                 677999999999*****99965 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.016
       PPR_2   9 lIsglckkgkveeAfklfneMkkrg 33 
                 l++ + ++ +++ A++++ e   r+
  EPX73961.1 302 LMNSYHQQSQFNAAVQVYREASARN 326
                 89****************9976665 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 0.7
       PPR_2  13 lckkgkveeAfklfneMkkrgleP 36 
                 + ++++++   k++++  + g++ 
  EPX73961.1 487 FSRRKDLDAMEKVYKYITDLGVST 510
                 667788888888888877777754 PP

  == domain 4  score: 5.8 bits;  conditional E-value: 0.0035
       PPR_2   5 tyNtlIsglckkgkveeAfklfneMkk 31 
                  y++++ ++ + g++++A+ +f   +k
  EPX73961.1 584 MYTIMMLYHTTVGEFKQALNVFPTIQK 610
                 59*******************977665 PP

  == domain 5  score: -2.5 bits;  conditional E-value: 1.4
       PPR_2  28 eMkkrglePnsy 39 
                   kk+g+e ++ 
  EPX73961.1 831 RLKKWGVEFDEA 842
                 679*****9986 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.3   3.6e-05      0.16       2      21 ..     304     323 ..     304     327 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 3.6e-05
      TPR_11   2 dayyeqGkyeeAieaYkkAl 21 
                 + y++q ++++A+++Y++A 
  EPX73961.1 304 NSYHQQSQFNAAVQVYREAS 323
                 78****************96 PP

>> PPR_3  Pentatricopeptide repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       1.4   6.2e+03      23      43 ..     485     505 ..     481     511 .. 0.80
   2 ?    8.2   0.0   0.00059       2.6      17      47 ..     514     544 ..     498     550 .. 0.90
   3 ?    1.1   0.2     0.095   4.3e+02      16      61 ..     583     624 ..     582     626 .. 0.81
   4 ?   -1.0   0.0      0.41   1.9e+03       7      39 ..     691     723 ..     685     724 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 1.4
       PPR_3  23 tayanagnkklalevlermkk 43 
                 t++ + ++++++++v +++  
  EPX73961.1 485 TLFSRRKDLDAMEKVYKYITD 505
                 677889999999999998765 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.00059
       PPR_3  17 tYthLLtayanagnkklalevlermkkkgik 47 
                 +Y +LL ay+ a ++k +   l+++++ gi+
  EPX73961.1 514 GYAALLDAYIEAADEKKIQSCLQKIEELGIT 544
                 79*************************9997 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.095
       PPR_3  16 vtYthLLtayanagnkklalevlermkkkgikPtvvtyNailgvig 61 
                 ++Yt ++     +g+ k al+v+  ++k    P+v+ ++++  v g
  EPX73961.1 583 YMYTIMMLYHTTVGEFKQALNVFPTIQK----PNVIHFSIVATVLG 624
                 6888888888899999999999999985....99999988777666 PP

  == domain 4  score: -1.0 bits;  conditional E-value: 0.41
       PPR_3   7 erkgikldvvtYthLLtayanagnkklalevle 39 
                  ++++++ v  +  L++ y   g+   a +vl+
  EPX73961.1 691 TANDLRYPVSLFSPLIREYTSLGDMTKAKNVLA 723
                 57899999999**************99999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (950 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       658  (0.0367003); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.71u 0.31s 00:00:01.02 Elapsed: 00:00:00.47
# Mc/sec: 6035.85
//
Query:       EPX73962.1  [L=150]
Description: D-Tyr-tRNA deacylase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.4e-52  178.0   0.2    1.6e-52  177.9   0.2    1.0  1  Tyr_Deacylase  D-Tyr-tRNA(Tyr) deacylase
  ------ inclusion threshold ------
       0.11   12.4   0.0       0.22   11.5   0.0    1.5  1  TPR_10         Tetratricopeptide repeat
       0.13   12.1   0.0       0.17   11.8   0.0    1.3  1  UPA            UPA domain


Domain annotation for each model (and alignments):
>> Tyr_Deacylase  D-Tyr-tRNA(Tyr) deacylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  177.9   0.2   2.7e-56   1.6e-52       1     144 []       2     147 ..       2     147 .. 0.96

  Alignments for each domain:
  == domain 1  score: 177.9 bits;  conditional E-value: 2.7e-56
                    EEEEEEEEEEEEEETTEEEEEESSEEEEEEE-BTT--HHHHHHHHHHHHH-EEEEE.TTSSEEEETTTTT-EEEEEE-GGGGSBTSSSSS-BGTTB CS
  Tyr_Deacylase   1 raviqrvksAsvtvegevvgsigkGllvlvgvekedteedleklakkilnlrifed.eegkmnlsvkdvggevLvVsqftLyadtrkGrrpsfhka 95 
                    +aviq+v +Asvtv++ vv+si+kGl+vlvgv+++dt ed++k+++k+l+l++fed +e+++++ + d++ge+L+VsqftL+a+++kG +p+fh++
     EPX73962.1   2 KAVIQKVLNASVTVDDAVVSSIKKGLCVLVGVGTDDTMEDVNKMCNKLLKLKLFEDaQEQPWRQTILDAQGEILCVSQFTLHARVNKGAKPDFHRS 97 
                    79*****************************************************944556*********************************** PP

                    --HHHHHHHHHHHHHHHHHCTC.TTEEE--TTS-EEEEEEEEEEEEEEEE CS
  Tyr_Deacylase  96 akpeeaeelyekfveklrerlg.ekvetGeFgadmkvslvndGPvtilld 144
                    +k+ ea +lye+++e l+++lg ++v++G+Fga+m+v+l+n+GPvtil d
     EPX73962.1  98 MKGPEAVQLYEAVLEGLKASLGnDSVKNGVFGAMMNVQLTNNGPVTILYD 147
                    *******************877577**********************986 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   3.7e-05      0.22      17      40 ..      99     122 ..      95     123 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 3.7e-05
      TPR_10  17 rydeAealleealairrrllGpdH 40 
                 ++ eA++l+e +l+  ++ lG+d+
  EPX73962.1  99 KGPEAVQLYEAVLEGLKASLGNDS 122
                 678******************996 PP

>> UPA  UPA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.9e-05      0.17      67     107 ..      41      83 ..       3      91 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.9e-05
         UPA  67 SiedvpsslwkskllakyqeipfshiwsgsqkaLhCt..Ftle 107
                  ++++++ l k kl+ + qe p+++   ++q ++ C   Ftl 
  EPX73962.1  41 DVNKMCNKLLKLKLFEDAQEQPWRQTILDAQGEILCVsqFTLH 83 
                 5788999*****************************5447775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       495  (0.0276089); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.30s 00:00:00.70 Elapsed: 00:00:00.44
# Mc/sec: 1025.30
//
Query:       EPX73963.1  [L=695]
Description: hypothetical protein SOCG_03179 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (695 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1340  (0.0747392); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                        21  (0.00117129); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.11u 0.37s 00:00:01.48 Elapsed: 00:00:00.56
# Mc/sec: 3734.68
//
Query:       EPX73964.1  [L=417]
Description: cAMP-dependent protein kinase regulatory subunit Cgs1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.3e-40  135.7   0.2    3.3e-20   72.0   0.1    2.5  2  cNMP_binding  Cyclic nucleotide-binding domain
    7.3e-07   28.7   0.9    1.9e-06   27.4   0.9    1.8  1  RIIa          Regulatory subunit of type II PKA R-subunit


Domain annotation for each model (and alignments):
>> cNMP_binding  Cyclic nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.3   0.0   7.6e-21   6.8e-17       6      89 .]     173     267 ..     171     267 .. 0.88
   2 !   72.0   0.1   3.6e-24   3.3e-20       2      87 ..     303     384 ..     302     386 .. 0.93

  Alignments for each domain:
  == domain 1  score: 61.3 bits;  conditional E-value: 7.6e-21
                   TT-EEE-TTSB-SEEEEEEES-EEEE..........EEETTS.EEEEEEE-TTEEESHHHHHHTS--SSEEEESST.EEEEEEEHHHHHHHHHH- CS
  cNMP_binding   6 agevifrqGdpadslyivlsGevrvy..........rlsedgkevvlavlgpGdlfGelalltgeprtatvvAltd.sellalprddflellqqd 89 
                   ag  ++ qG  +d++y+v++Ge+ vy          ++ ++g    +a+++pG++fGelal++++pr+atvv++t+ ++ +al+r++f+++++++
    EPX73964.1 173 AGVALIVQGAVGDYFYVVEKGEFDVYkrkepnisteAVLASGYGDHVATISPGEYFGELALMYNAPRAATVVSKTPdCTFYALDRSSFHRIVMEN 267
                   7889**********************766666666655555555578899*************************99**************9986 PP

  == domain 2  score: 72.0 bits;  conditional E-value: 3.6e-24
                   EEE-TT-EEE-TTSB-SEEEEEEES-EEEEEEETTS.EEEEEEE-TTEEESHHHHHHTS--SSEEEESSTEEEEEEEHHHHHHHHH CS
  cNMP_binding   2 rsfkagevifrqGdpadslyivlsGevrvyrlsedgkevvlavlgpGdlfGelalltgeprtatvvAltdsellalprddflellq 87 
                   + f+age +++qGd ++++y+++ Ge++v  +++d    ++ +l++Gd+fGelal+++++rtatv+A+++ +l+ +++ +f++ll 
    EPX73964.1 303 VVFQAGEEVIHQGDIGNQFYLIEDGEAEV--IKKDK--GTVVTLTKGDYFGELALIHETQRTATVRAKSRLKLATFDKPTFNRLLG 384
                   689**************************..55555..38999**************9*************************985 PP

>> RIIa  Regulatory subunit of type II PKA R-subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   0.9   2.1e-10   1.9e-06       2      38 .]       6      43 ..       5      43 .. 0.97

  Alignments for each domain:
  == domain 1  score: 27.4 bits;  conditional E-value: 2.1e-10
                THHHHHHHHHHHHHHH--S-HHHHHHHHH.HHHHHHHH CS
        RIIa  2 glqaLLedltveVlraqPsDvlqFaadYF.ekLeeeRa 38
                ++++L e+lt  V+ ++P D+lq + d+F  kL+ +R+
  EPX73964.1  6 SFEELIEELTSLVNQQNPTDLLQLCFDFFsNKLKNKRR 43
                89*********************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (417 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       713  (0.039768); expected 358.6 (0.02)
Passed bias filter:                      581  (0.0324056); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 2870.85
//
Query:       EPX73965.1  [L=731]
Description: fork head transcription factor Fhl1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-31  107.7   0.8    5.5e-31  106.7   0.8    1.6  1  Forkhead    Forkhead domain
      7e-13   48.7   0.1    1.4e-12   47.8   0.1    1.5  1  FHA         FHA domain
  ------ inclusion threshold ------
      0.026   14.7   0.0      0.055   13.7   0.0    1.4  1  FHA_2       FHA domain
      0.049   11.9   0.1      0.071   11.3   0.1    1.1  1  Fusion_gly  Fusion glycoprotein F0


Domain annotation for each model (and alignments):
>> Forkhead  Forkhead domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.7   0.8   1.2e-34   5.5e-31       1      87 []     291     377 ..     291     377 .. 0.95

  Alignments for each domain:
  == domain 1  score: 106.7 bits;  conditional E-value: 1.2e-34
                 ------HHHHHHHHHHT-TTT-B-HHHHHHHHHCC-HHHHCC.-CCHHHHHHHHHHHHC--EEETT.-T.TSS--EEE--TTHHHHHH CS
    Forkhead   1 skPpysYaaLIaqAiksspekkltLseIyefieenfpyyrtaakkgWqnSirhnLslnkcFekvpreee.egkgslwtidpeseekfe 87 
                 +kP++sYa+LIa+ + s+++kk+tL +I+e+i++++pyy+++ + +W+nSirhnLslnk+F+++pr+++ +gkgs+w +dp++ ++fe
  EPX73965.1 291 QKPNLSYANLIARTLISNSNKKMTLGDICEWISHTWPYYQYQ-PPAWHNSIRHNLSLNKAFIRIPRRQNeSGKGSFWILDPSYIDQFE 377
                 69***************************************6.**********************8666369**********999985 PP

>> FHA  FHA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.8   0.1   3.1e-16   1.4e-12       1      69 []      39     111 ..      39     111 .. 0.95

  Alignments for each domain:
  == domain 1  score: 47.8 bits;  conditional E-value: 3.1e-16
                 EEEESS....TTSSEETTSTT.STTTEEEEEEETTCEEEEEEEESSSSSEEETTEEESTTSEEEE-TTEEEEET CS
         FHA   1 vtiGRs....sdcdivlddps.iSrkHalikfdkgsgkvyleDlgSknGtfvNgqrigkgepveLksgdvielG 69 
                 vt+GR+    sdcd+ l d + iSr+Ha i+++ ++++++   +g knG fv+g+ +++g +v+L+sg+++++G
  EPX73965.1  39 VTMGRKasnfSDCDVHLGDTKaISRQHAKIVYNFPNQRFEFSVIG-KNGAFVDGEFVERGSTVPLHSGTRVQIG 111
                 69****************9555*********999999******98.**************************98 PP

>> FHA_2  FHA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   1.2e-05     0.055      34      91 ..      59     116 ..      39     119 .. 0.92

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.2e-05
       FHA_2  34 kkcSrnqvelkadlekklvkvkqlGanpssvngkklkknesvelkegqtlelleekyp 91 
                 k++Sr++ +++ ++ ++  +   +G+n + v+g  ++++++v l++g+++++ + ++ 
  EPX73965.1  59 KAISRQHAKIVYNFPNQRFEFSVIGKNGAFVDGEFVERGSTVPLHSGTRVQIGQISFS 116
                 578**********************************************999776665 PP

>> Fusion_gly  Fusion glycoprotein F0
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   1.6e-05     0.071     144     186 ..     478     522 ..     472     524 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 1.6e-05
                 SHCEEEEETTHHHHHHTTCCCT..TTSHHHHHHHHHHHHHHHHHH CS
  Fusion_gly 144 selvlavnalqdyintellpai..nqlsCdiadlklaieltqyls 186
                 ++ v a+  lqd+in +l pa+  n  + ++++++la++l ++l+
  EPX73965.1 478 EQAVHAISLLQDHINRQLGPAAvnNPAQATAIANALAVALAKKLQ 522
                 67889***************87334457788999******99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (731 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       622  (0.0346924); expected 358.6 (0.02)
Passed bias filter:                      311  (0.0173462); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.62u 0.27s 00:00:00.89 Elapsed: 00:00:00.46
# Mc/sec: 4809.40
//
Query:       EPX73966.1  [L=222]
Description: vacuolar sorting protein Vps32 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.7e-49  166.6  19.4    3.7e-49  166.6  19.4    1.4  2  Snf7       Snf7
  ------ inclusion threshold ------
        1.6    9.2   4.8          3    8.3   4.3    1.9  2  BNIP2      Bcl2-/adenovirus E1B nineteen kDa-interacting prot


Domain annotation for each model (and alignments):
>> Snf7  Snf7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.6  19.4   4.1e-53   3.7e-49       3     171 ..      22     192 ..      20     194 .. 0.97
   2 ?   -2.2   0.2       0.3   2.7e+03     135     151 ..     205     218 ..     195     220 .. 0.56

  Alignments for each domain:
  == domain 1  score: 166.6 bits;  conditional E-value: 4.1e-53
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
        Snf7   3 irsLrkaerkldkkqeslekkikkleaelkklakkgnkdralllLKqkkryekqldqldnqlanleqvslaienlksnkevlnamkqgakamkamnkkv 101
                 i +++++  + +kk+++le++i++ ++e++k+++++nk++a+ +LK+kk+ye++l+++++++ n+eq++++i+n++ n e+l+am+qga+amk++++ v
  EPX73966.1  22 ITRFQDTLSMFEKKEQRLERQIAE-QSEIAKKNATTNKRAAMAALKRKKMYENELEKIEGSRMNIEQQLYTIQNANLNFETLQAMRQGAEAMKQIQRGV 119
                 678999******************.************************************************************************** PP

                 CCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTT-GGTTHHHHHHHHHHHHHHHHHCSH....HHHHHHHTXXXS CS
        Snf7 102 didkidklmdeiedqmekaeeisEalsrslddadeedEeeleaeLdaLeqelgdeell...desvklpevPse 171
                 d dk+d++md i+dq++++eeis ++s++++  +++dE+el +eLd+L+q ++d+++l   ++ v++p v ++
  EPX73966.1 120 DADKVDNIMDKIRDQQAISEEISAMISTPMGLNADVDEDELANELDELQQMELDNKMLgaeKPPVHAPGVTTG 192
                 *********************************************************9**9999**9998876 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.3
                 GGTTHHHHHHHHHHHHH CS
        Snf7 135 deedEeeleaeLdaLeq 151
                 +e+dEee   eL +L++
  EPX73966.1 205 QEVDEEE---ELRKLQA 218
                 4555554...4444444 PP

>> BNIP2  Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.31   2.8e+03      67      75 ..      37      46 ..      14      84 .. 0.52
   2 ?    8.3   4.3   0.00034         3      22     106 ..     131     216 ..      36     219 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.31
       BNIP2 67 leweddlp.a 75
                  +e+++  +
  EPX73966.1 37 QRLERQIAeQ 46
                2333332211 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00034
       BNIP2  22 dlsqflasvtpddissledsldinvDdletpsdedslevpetlkdleweddlp.akeaeaasesaeslpqysaedeardsrrWrki 106
                 +  q   s + + + s++  l+ +vD+ e  ++ d+l+ +e  +++  +++ p ++   ++ ++ ++lp++++ +e++++++ rk+
  EPX73966.1 131 IRDQQAISEEISAMISTPMGLNADVDEDELANELDELQQMELDNKMLGAEKPPvHAPGVTTGTPVDKLPSVAKPQEVDEEEELRKL 216
                 333333344556777889999*****************999999888887777444466677788888888888888888777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2082  (0.116125); expected 358.6 (0.02)
Passed bias filter:                      533  (0.0297284); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 1570.23
//
Query:       EPX73967.1  [L=327]
Description: GET complex ATPase subunit Get3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   4.7e-111  370.8   0.1   5.4e-111  370.6   0.1    1.0  1  ArsA_ATPase  Anion-transporting ATPase
    2.4e-15   56.9   0.1    7.6e-15   55.3   0.0    1.7  2  AAA_31       AAA domain
    3.5e-11   43.3   0.0    5.6e-11   42.6   0.0    1.4  1  CbiA         CobQ/CobB/MinD/ParA nucleotide binding domain
    1.1e-05   25.2   0.0     0.0015   18.2   0.0    2.3  2  SRP54        SRP54-type protein, GTPase domain
      6e-05   22.6   0.1    0.00012   21.7   0.1    1.5  1  Fer4_NifH    4Fe-4S iron sulfur cluster binding proteins, Nif
    0.00011   21.7   7.6     0.0016   18.0   3.5    3.6  2  ParA         NUBPL iron-transfer P-loop NTPase
    0.00014   21.5   0.0    0.00026   20.6   0.0    1.5  1  CBP_BcsQ     Cellulose biosynthesis protein BcsQ
  ------ inclusion threshold ------
      0.012   15.1   0.0      0.027   13.9   0.0    1.6  1  PhoH         PhoH-like protein
      0.017   14.7   0.1       0.23   11.0   0.1    2.1  2  AAA_25       AAA domain
      0.029   13.6   0.1      0.055   12.6   0.1    1.4  1  NB-ARC       NB-ARC domain
      0.051   12.9   0.0        0.1   11.8   0.0    1.5  1  Zeta_toxin   Zeta toxin


Domain annotation for each model (and alignments):
>> ArsA_ATPase  Anion-transporting ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  370.6   0.1  3.3e-114  5.4e-111       2     304 ..      20     318 ..      19     319 .. 0.96

  Alignments for each domain:
  == domain 1  score: 370.6 bits;  conditional E-value: 3.3e-114
                  EEEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEE-STTTHHHHHHTS--BSS-EEET..SSEEEEE--HHHHHHHHHCCHHGGGSCCHHHHHHHHHH CS
  ArsA_ATPase   2 kvilvgGKGGVGKttvsaatavklsekgkkvllistDPAhslsDsfdqklgkeptkvk..eNLsavEidpeveleeakqevqkeeeallgleeledvl 97 
                  k+++vgGKGGVGKtt s+++a+++s+ + +vllistDPAh+lsD+f +k+gk+++kv   eNLsa+Eidp++ ++e+ +++ +++ +      +++++
   EPX73967.1  20 KWVFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPAHNLSDAFGTKFGKDAKKVPgfENLSAMEIDPNQSIQEMTEQADQQNPNN----PMSGMM 113
                  9*************************************************************************99999887776644....4589** PP

                  HHHHTSSTTHHHHHHHHHHHHHHHCSSSSEEEEESBSCCHTCGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSHCHHHHHHHHHHHHHHHHHHHH CS
  ArsA_ATPase  98 aeelaslPGideilsfeellkyvkeeeydvvvlDtaPTGhtlrllslpevleklleklvklkeklsplakqlvkllglggvsieealeeleetkeeik 195
                  ++ + ++PGide+l+f+e+lk vk++e+d v++DtaPTGhtlr+l++p+vlek l kl  l   ++p+++q+++l+g+ + ++ + + +le + e+i 
   EPX73967.1 114 QDLAFTIPGIDEALAFAEILKQVKSMEFDCVIFDTAPTGHTLRFLNFPTVLEKALGKLGGLSSRFGPMINQMSGLMGVNANQE-DIFGKLEGMRENIS 210
                  ************************************************************************99988766655.5************* PP

                  HHHHHHTSTTTEEEEEEEESSHHHHHHHHHHHHHHHHTT-EEEEEEEEEE-TTCSSSTSHHHHHHHHHHHHHHHHHHHHTTTSEEEEEE--SS-S-SH CS
  ArsA_ATPase 196 kveeiltdpertsfrlVvipEklslkEteRaikeLkkygikvdavivNkllpeeeqenCeflearkkiqkkylkeieelfedlevvklplleeEvvGl 293
                  +v++++++ e t+f++V+i+E+lsl+EteR+i+eL  y+i+v++++vN+ll + ++  C+ + ar+k+q+kyl++ie+l+ed+++vk+p +++Ev+G 
   EPX73967.1 211 QVNQQFKNAELTTFVCVCISEFLSLYETERMIQELVGYEIDVNNIVVNQLLLDPHTT-CPQCLARRKMQQKYLDQIEDLYEDFHIVKVPQIPAEVRGP 307
                  *************************************************99999995.**************************************** PP

                  HHHHHHHHHHC CS
  ArsA_ATPase 294 ekleklselly 304
                  e+l+++se+l+
   EPX73967.1 308 EALKSFSEMLV 318
                  ********997 PP

>> AAA_31  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.3   0.0   4.6e-18   7.6e-15       7     128 ..      24     151 ..      20     159 .. 0.78
   2 ?   -1.4   0.1       1.2   1.9e+03      88     118 ..     259     289 ..     204     299 .. 0.53

  Alignments for each domain:
  == domain 1  score: 55.3 bits;  conditional E-value: 4.6e-18
      AAA_31   7 anqKGGvGKTTtsvnlaaalaklgkkvLlvDlDpQanattglgiekneiek......tlyevli.eeknikeaiiktkvenldlipssidLaeaeielv 98 
                 +  KGGvGKTTts+ la  ++k    vLl+  Dp  n++ ++g++  +  k      +l  + i  +++i+e+  +++++n++  p s  ++++   + 
  EPX73967.1  24 VGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPAHNLSDAFGTKFGKDAKkvpgfeNLSAMEIdPNQSIQEMTEQADQQNPNN-PMSGMMQDLAFTIP 121
                 667*************************************99987444223134444666666767888888888777777653.55666788888776 PP

      AAA_31  99 elekkeeilkellekvkd.eYDyiiiDcpPs 128
                 +++ +  ++ e+l++vk+ e+D +i+D+ P+
  EPX73967.1 122 GID-EALAFAEILKQVKSmEFDCVIFDTAPT 151
                 665.46678*******9846**********7 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1.2
      AAA_31  88 idLaeaeielvelekkeeilkellekvkdeY 118
                   L + ++   +   ++++ +++l++++d Y
  EPX73967.1 259 QLLLDPHTTCPQCLARRKMQQKYLDQIEDLY 289
                 2233344444444455555566777776666 PP

>> CbiA  CobQ/CobB/MinD/ParA nucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.6   0.0   3.4e-14   5.6e-11       2      55 ..      22     217 ..      21     298 .. 0.73

  Alignments for each domain:
  == domain 1  score: 42.6 bits;  conditional E-value: 3.4e-14
                 EEEESSTTSSHHHHHHHHHHHHHHTT--EEEEEEEESSCCCCHHTTEB-HHHH.............................................. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.............................................. RF
        CbiA   2 aiastkGGvGKTtlaanLaralarrglrVllvDaDpqannlaileglendiep.............................................. 54 
                 +++++kGGvGKTt++++La+ +++ +  Vll+ +Dp  n++  ++g++  ++                                               
  EPX73967.1  22 VFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPAHNLSD-AFGTKFGKDAkkvpgfenlsameidpnqsiqemteqadqqnpnnpmsgmmqdlaft 119
                 689**************************************9.66665555555666999999999999998888888888888888888888888888 PP

                 .................................................................................................C CS
                 .................................................................................................x RF
        CbiA  55 .................................................................................................d 55 
                                                                                                                   
  EPX73967.1 120 ipgidealafaeilkqvksmefdcvifdtaptghtlrflnfptvlekalgklgglssrfgpminqmsglmgvnanqedifgklegmrenisqvnqqfK 217
                 88777777777777777777777777777777777777777777777666666666666666666666666666666666644444444444444440 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   9.4e-07    0.0015       5      38 ..      22      56 ..      19     106 .. 0.84
   2 ?    4.7   0.0     0.013        20      69      92 ..     126     149 ..     116     156 .. 0.83

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 9.4e-07
                EEEE.STTSSHHHHHHHHHHHHHHTTS-EEEEEES CS
       SRP54  5 llvG.lqGaGKTttlaKLaallkkegkkvllvaaD 38
                ++vG   G+GKTtt   La +++k   +vll+++D
  EPX73967.1 22 VFVGgKGGVGKTTTSCSLAIQMSKVRSSVLLISTD 56
                45550567**************************9 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.013
                 HHHHHHHHHHHHHTTSSEEEEEE- CS
       SRP54  69 aavakeavekakeekidvvlvDTa 92 
                 a   +e +++ k+ ++d+v+ DTa
  EPX73967.1 126 ALAFAEILKQVKSMEFDCVIFDTA 149
                 5556778999*************9 PP

>> Fer4_NifH  4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.1   7.1e-08   0.00012       4      41 ..      23      60 ..      20      74 .. 0.90

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 7.1e-08
   Fer4_NifH  4 aiyGkGGiGksttsqnlsaalaemgkkvlivGCDPkaD 41
                 + GkGG+Gk+tts+ l++ +++    vl++  DP ++
  EPX73967.1 23 FVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPAHN 60
                577********************************886 PP

>> ParA  NUBPL iron-transfer P-loop NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   3.5   9.5e-07    0.0016       9      41 ..      24      56 ..      18     154 .. 0.76
   2 ?    2.5   0.1      0.05        82     133     213 ..     218     304 ..     205     321 .. 0.77

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 9.5e-07
        ParA  9 lSgKGGVGKStvavnlAlaLakkglkvgllDaD 41
                + gKGGVGK+t++++lA++++k   +v l+ +D
  EPX73967.1 24 VGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTD 56
                68********************99999998888 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.05
        ParA 133 klplagaviVttpqevaladvkkaiemfkkvkvkvlGvveNm....sgfvcpkcgekteifgk..gggeklaeelgvpllgeipldp 213
                 + +l+  v V   + ++l ++++ i+ +   +++v  +v N      + +cp+c  + ++ +k  ++ e+l e++++  + +ip + 
  EPX73967.1 218 NAELTTFVCVCISEFLSLYETERMIQELVGYEIDVNNIVVNQllldPHTTCPQCLARRKMQQKylDQIEDLYEDFHIVKVPQIPAEV 304
                 337789999******************************997333346799999988888766556777888888877777777665 PP

>> CBP_BcsQ  Cellulose biosynthesis protein BcsQ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   1.6e-07   0.00026       6      75 ..      23      96 ..      20     156 .. 0.74

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 1.6e-07
    CBP_BcsQ  6 lqGvRGGvGttsllaaLawalhelgesvlviDlspdnlLrlhFnvdi....eqregwaraeldgapwrqaaley 75
                + G +GGvG+t+ + +La+++ +++ svl+i + p+  L   F +++    ++  g+ +  + + + +q++ e+
  EPX73967.1 23 FVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPAHNLSDAFGTKFgkdaKKVPGFENLSAMEIDPNQSIQEM 96
                56779***************************999887776665554100055556655555555555555555 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   1.6e-05     0.027      19      76 ..      19      76 ..       9     103 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.6e-05
                -SEEEEE--TTSSTTHHHHHHHHHHHHTTS-SEEEEEE-S--TT----SS-------- CS
        PhoH 19 ndivfaiGpaGtGKtylavalavealkkkkvkriiltrpaveageelGflpgdleekv 76
                 + vf+ G+ G GKt  +++la+++ k ++   +i t pa +  +  G   g+ ++kv
  EPX73967.1 19 LKWVFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPAHNLSDAFGTKFGKDAKKV 76
                4579************************************999999998888777776 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   0.00014      0.23      36      60 ..      22      46 ..       3      61 .. 0.83
   2 ?    1.4   0.0      0.13   2.1e+02     128     150 ..     127     148 ..      84     153 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00014
      AAA_25 36 allaGapgtGKttlaldlalavatG 60
                + + G +g+GKtt  ++la+ +++ 
  EPX73967.1 22 VFVGGKGGVGKTTTSCSLAIQMSKV 46
                5789****************99854 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.13
      AAA_25 128 advdaleaaieevegvrlvviDp 150
                  +++++ ++++++e  + v++D+
  EPX73967.1 127 LAFAEILKQVKSME-FDCVIFDT 148
                 3688999*****75.*******9 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   3.4e-05     0.055      10      39 ..      11      38 ..       5      49 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 3.4e-05
                HHHHCTTTSCSEEEEEEESTTSSHHHHHHH CS
      NB-ARC 10 ekLlekdelqslvvalvGmgGvGKttlakq 39
                ++Ll ++ l+  +v++ G+gGvGKtt + +
  EPX73967.1 11 QNLLDQKTLK--WVFVGGKGGVGKTTTSCS 38
                4555578888..*************97655 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   6.4e-05       0.1      12      52 ..      15      56 ..       8      76 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 6.4e-05
  Zeta_toxin 12 sqerPklillgGqpGAGKselaellkdele.rqgnvvrldpD 52
                +q++ k +++gG  G GK++++  l+ ++   +++v+ +++D
  EPX73967.1 15 DQKTLKWVFVGGKGGVGKTTTSCSLAIQMSkVRSSVLLISTD 56
                5677789***************99999998456666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       934  (0.0520944); expected 358.6 (0.02)
Passed bias filter:                      790  (0.0440627); expected 358.6 (0.02)
Passed Vit filter:                        85  (0.00474092); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 2222.13
//
Query:       EPX73968.1  [L=172]
Description: copper transporter complex subunit Ctr5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.1e-21   76.5  11.0    2.5e-20   73.6  11.0    1.9  1  Ctr       Ctr copper transporter family
  ------ inclusion threshold ------
        3.4    8.0   4.7         33    4.8   0.1    2.2  2  DUF2530   Protein of unknown function (DUF2530)


Domain annotation for each model (and alignments):
>> Ctr  Ctr copper transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.6  11.0   2.8e-24   2.5e-20       1     148 []      31     155 ..      31     155 .. 0.87

  Alignments for each domain:
  == domain 1  score: 73.6 bits;  conditional E-value: 2.8e-24
         Ctr   1 mlFhwstddt.ilfrsWritskgqlagsciglfllaifyeflralrerlerewdrhlarsrekrkaassplvdssssseeeaeakstsslskseakksv 98 
                 ml++w+t d  +l++sW+  ++ ++ags++g+f++ai  e+ r    rl+r +d ++a+++   + +                   +  l+     ++ 
  EPX73968.1  31 MLWNWYTVDScFLSKSWHAYTANKFAGSIVGIFFFAIAIEACR----RLQRIFDGYIAQQS---NGKTL-----------------QGPLRLFFPGSTP 105
                 9******************************************....99998888873222...11111.................1234557889999 PP

         Ctr  99 rttpeqqlirallyvvqvllaYilMLlvMtyNvglflavilGagvGeflf 148
                 + ++ qql+ra+l ++  + a ilML+vM++N++++l  +lGa++G++ f
  EPX73968.1 106 HVNVLQQLARAFLQTCYYGAATILMLIVMSFNGYVVLFTFLGAWIGYLSF 155
                 99999******************************************976 PP

>> DUF2530  Protein of unknown function (DUF2530)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.1    0.0036        33      21      59 ..      30      68 ..      26      78 .. 0.82
   2 ?    4.1   1.5    0.0061        55      19      56 ..     118     155 ..     107     157 .. 0.87

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0036
     DUF2530 21 tllWlvalvvllvvgdaleswlpvclaGlvvGllGlaif 59
                ++lW   +v   ++ +++++++    aG +vG++ +ai 
  EPX73968.1 30 SMLWNWYTVDSCFLSKSWHAYTANKFAGSIVGIFFFAIA 68
                5688888898999999****************9887775 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.0061
     DUF2530  19 vgtllWlvalvvllvvgdaleswlpvclaGlvvGllGl 56 
                 + t+ + +a++++l+v++    ++ ++  G+ +G l +
  EPX73968.1 118 LQTCYYGAATILMLIVMSFNGYVVLFTFLGAWIGYLSF 155
                 56889999******999999999***********9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       564  (0.0314574); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1305.54
//
Query:       EPX73969.1  [L=1210]
Description: ATP-dependent RNA helicase Dhr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.1e-22   78.5   0.0    4.1e-22   78.5   0.0    3.2  3  HA2           Helicase associated domain (HA2)
    9.2e-15   54.9   0.3      9e-13   48.5   0.0    2.9  3  Helicase_C    Helicase conserved C-terminal domain
    3.7e-08   33.3   0.1    1.3e-07   31.6   0.0    1.9  2  DEAD          DEAD/DEAH box helicase
    7.4e-06   26.2   0.0    2.3e-05   24.6   0.0    1.9  1  OB_NTP_bind   Oligonucleotide/oligosaccharide-binding (OB)-fo
    0.00023   21.4   1.7      0.011   16.0   0.0    2.9  3  AAA_22        AAA domain
     0.0052   17.1   0.0      0.012   16.0   0.0    1.6  1  AAA_19        AAA domain
  ------ inclusion threshold ------
      0.034   13.7   0.0      0.098   12.2   0.0    1.7  1  AAA_25        AAA domain
      0.054   12.8   0.0       0.21   10.9   0.0    1.9  2  FtsK_SpoIIIE  FtsK/SpoIIIE family
      0.055   13.2   0.0       0.12   12.1   0.0    1.4  1  AAA_30        AAA domain
      0.083   11.9   0.0       0.17   10.9   0.0    1.4  1  T2SSE         Type II/IV secretion system protein
       0.23   11.9   1.6        2.2    8.8   0.1    2.9  2  Vps39_2       Vacuolar sorting protein 39 domain 2


Domain annotation for each model (and alignments):
>> HA2  Helicase associated domain (HA2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.8         3   4.8e+03      67      95 ..      63      78 ..      28     109 .. 0.54
   2 ?   -1.6   0.8         2   3.2e+03      79     104 ..     330     355 ..     292     393 .. 0.59
   3 !   78.5   0.0   2.5e-25   4.1e-22       1      94 [.     878     969 ..     878     982 .. 0.77

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 3
         HA2 67 eneeekeeeeeeeekakkkrkeeekarrk 95
                e++         ++k++++r+ +    ++
  EPX73969.1 63 EDR---------KAKEERRRQLK----EQ 78
                111.........11222222222....12 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 2
         HA2  79 eekakkkrkeeekarrklahkda.egD 104
                 e++ +++++++++  +++a ++   gD
  EPX73969.1 330 EDRDNEASERANR-FKSWAAQQVlPGD 355
                 2222222222222.3344444444444 PP

  == domain 3  score: 78.5 bits;  conditional E-value: 2.5e-25
         HA2   1 AlelLvalgALdeegnlTelGrkmaelPlsprlakmLlaaaeleegcldevitivAalsveeifleeneeekeeeeee.........eekakkkrkeee 90 
                 Al+lL  lgA d+eg+lT+lG++m+ +Plspr++kmL+++  ++ gcl+ vi++vAals +++f+++++   + +++e         e       +e+ 
  EPX73969.1 878 ALHLLSVLGATDREGRLTKLGEQMSLFPLSPRFSKMLIIG--QQLGCLPFVIALVAALSINQLFVSKQTLLYDANRKEsvseeteniE-------NEDL 967
                 899*************************************..667**********************998777766533322222211.......1111 PP

         HA2  91 karr 94 
                 k  +
  EPX73969.1 968 K--Q 969
                 1..1 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       8.7   1.4e+04      27      79 ..      94     120 ..      72     131 .. 0.50
   2 ?    3.2   0.0     0.069   1.1e+02       4      43 ..     638     677 ..     635     702 .. 0.75
   3 !   48.5   0.0   5.5e-16     9e-13      33     111 .]     720     816 ..     705     816 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 8.7
                 HHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSS CS
  Helicase_C  27 drlekvklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerG 79 
                 +rl+  k                        i ++ +k++s  L   ++ae++
  EPX73969.1  94 KRLD--K-----------------------YIENKLKKETSAAL-MAKIAEES 120
                 3333..2.......................23333322222222.22444444 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.069
                 HHHHHHHHHTTTTSEEEEEESSHHHHHH.HHHHHHHTTSTE CS
  Helicase_C   4 eallellkleeeggkilifvntidrlek.vklllekkgikv 43 
                 ++++++ +++   g il+f++ ++++e+ +++l+++++ ++
  EPX73969.1 638 DKVCKI-HNRLPAGAILVFLTGQQEVEQlCSMLRKRFNRSY 677
                 556666.488999*************999888877775444 PP

  == domain 3  score: 48.5 bits;  conditional E-value: 5.5e-16
                 HHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSH..................HHHHHHHTTSSSTT CS
  Helicase_C  33 klllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnv..................tsyiqriGRtgRag 111
                 +l +e++ +++++l++ l+++++++++e+  +g++ +++at+vae++i+ip+v++V++++  ++                   +++ qr+GR+gR g
  EPX73969.1 720 ELDKESEPMHILPLYSLLTTENQLKVFEKPPEGHRMCIVATNVAETSITIPNVRYVVDCGKAKERvynehtsvqkfevcwiskANADQRAGRAGRTG 816
                 4446666899****************************************************774477888999999******************86 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.6   0.0   7.8e-11   1.3e-07       7     172 ..     432     596 ..     427     599 .. 0.76
   2 ?   -3.2   0.0       3.7     6e+03      35      71 ..    1116    1148 ..    1113    1155 .. 0.71

  Alignments for each domain:
  == domain 1  score: 31.6 bits;  conditional E-value: 7.8e-11
                 HHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHS.TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCSEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   7 aiplilgggdvlvaaeTGsGKTlaflipvlqivyet.kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvdivvgt 104
                 +++++  ++ v+++++TGsGKT+     ++++ + + +++t  ++ +  P r  a  +++++ + +   + +v+     ++ r + s+++ ++ i ++t
  EPX73969.1 432 IMEHVFANDVVIICGATGSGKTTQVPQFLFEAGFGSpESDTPGMIAVTQPRRVAAVSIAKRVAEELTGFSSKVS-----HQIRFD-STVNPETAIKFMT 524
                 456666788999***********98888887776667777777888999*************999997664554.....333333.33436799***** PP

                 HHHHHHHHHCTSSHCTTEEEEEEETHHHHHHT.....TTHHHHHHHHHHSHHHCTTST.TTSEEEEEESSBS.HH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxx.xx RF
        DEAD 105 pgrlddllstgklnlsqvrflVlDEadrlldq.....gfsdfinrilnqlpqitcdgk.lqrqvivlSATlp.kd 172
                  g l++ lst  + l + + +++DEa++ + +     g    i r+ +++++   + k l+  ++++SATl  +d
  EPX73969.1 525 DGVLIRELST-DFLLTSYSAIIVDEAHERSVNtdillGLLSRIVRLRREMSENDPNIKpLK--LLIMSATLRvSD 596
                 ******9985.457999***********999877666666667777777766555555444..********8666 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 3.7
                  HHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   35 vlqivyetkgktgpkalivePtreLaeqtlnnlkkfk 71  
                  v+q++     ++ +  +++eP+++ + q+l +l k  
  EPX73969.1 1116 VYQHLH----ESSTGRVYMEPLTSVTGQQLARLAKNS 1148
                  455553....34445799********99999998765 PP

>> OB_NTP_bind  Oligonucleotide/oligosaccharide-binding (OB)-fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.0   1.4e-08   2.3e-05       1      82 [.    1067    1147 ..    1067    1148 .. 0.89

  Alignments for each domain:
  == domain 1  score: 24.6 bits;  conditional E-value: 1.4e-08
                   HHHHHHHHHTTCEEEEEETTCCEEET.T.TCEEEEE-TTSTTTTT...TSSSEEEEEEEEES..SSEEEEEEEEE-HHHHHHHSTT CS
  OB_NTP_bind    1 lraillaGlypqiarkdpskkdykta.r.tktrvfihpsSvlaknekekepewvvytelvet..tklylrdltaidpawLllfagq 82  
                   lr+++++++++qia +d++k +y t+   +++ + + p +  +     ++p++ vy+ l e+   ++y+  lt ++ ++L+ +a++
   EPX73969.1 1067 LRQFIASSYIDQIAFYDQEKGGYVTLfPcGAETARFVPDTPPN-----FQPQFAVYQHLHESstGRVYMEPLTSVTGQQLARLAKN 1147
                   79***********************953579999999999998.....9*********77652277****************9976 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.9     0.088   1.4e+02      18      91 ..      25     109 ..      25     121 .. 0.79
   2 !   16.0   0.0   6.8e-06     0.011       7     110 ..     441     564 ..     436     589 .. 0.75
   3 ?   -3.7   0.0         8   1.3e+04      37      68 ..     645     677 ..     627     686 .. 0.63

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.088
      AAA_22  18 KTtllrrlleqldeeakaee.......erpevv.....fvtlpsstsskdllrellralglelka...erlsseellealeqalrarav 91 
                 K++l r ++eq+d+ +++ +                   +t    +  ++ +r+l ++l  e+++   +++++++l +++e+ l++   
  EPX73969.1  25 KSRLHRSVREQDDASSEHPKpileepqT----TdtnvdVITDEDRKAKEERRRQLKEQLMKENEGapmSTKKKKRLDKYIENKLKKETS 109
                 99999*******999999999*965553....4443345555555577788*********99999999999999999999999988765 PP

  == domain 2  score: 16.0 bits;  conditional E-value: 6.8e-06
      AAA_22   7 ilvvtGesGtGKTtllrrlleqldeeakaee.erpevvfvtlpsstsskdllrellralglelka........erlsseellealeqalrarav..... 91 
                 +++++G +G+GKTt + ++l ++       e   p+ + vt p      +++++++++l+   ++        ++ + e  ++ +++ +  r       
  EPX73969.1 441 VVIICGATGSGKTTQVPQFLFEAG--FGSPEsDTPGMIAVTQPRRVAAVSIAKRVAEELTGFSSKvshqirfdSTVNPETAIKFMTDGVLIRELstdfl 537
                 689***************999973..3333368999999999999999999999999999877779999999967777777777777766666666777 PP

      AAA_22  92 ...ielliiDEaqhlrs......eeale 110
                     +++i+DEa+   s        +l+
  EPX73969.1 538 ltsYSAIIVDEAHER-SvntdilLGLLS 564
                 88889********96.333333333333 PP

  == domain 3  score: -3.7 bits;  conditional E-value: 8
      AAA_22  37 e.erpevvfvtlpsstsskdllrellralglel 68 
                 +  +++ ++v l+++ + ++l+++l + ++++ 
  EPX73969.1 645 NrLPAGAILVFLTGQQEVEQLCSMLRKRFNRSY 677
                 345667777777777778888888877777554 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   7.3e-06     0.012       5     116 ..     433     554 ..     429     573 .. 0.57

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 7.3e-06
      AAA_19   5 ve.alkekvllvtaGpGtGKTrvlkhivall..velggvkpeeillvaftgrAakelrerlaalgae.....atTiHrlalldfddll..tealelle. 92 
                 +e  ++++v+++ +  G+GKT+ + + + ++   + ++  p  i++  + + Aa  +++r+a+   e      +  H++    fd+++  ++a +++  
  EPX73969.1 433 MEhVFANDVVIICGATGSGKTTQVPQFLFEAgfGSPESDTPGMIAVTQPRRVAAVSIAKRVAE---EltgfsSKVSHQI---RFDSTVnpETAIKFMTd 525
                 45567899**************99887654411334444444444444555566666666622...2222336666766...44444400233444447 PP

      AAA_19  93 .....eaeeekklqeee.llivDEfqdvde 116
                      e  ++++l   + ++ivDE+ + + 
  EPX73969.1 526 gvlirEL-STDFLLTSYsAIIVDEAHERSV 554
                 7777444.4555557777******987543 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0     6e-05     0.098      13      63 ..     419     469 ..     406     507 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 6e-05
      AAA_25  13 adlaapppprrwlvkgllpagelallaGapgtGKttlaldlalavatGkpw 63 
                 ++la p+   ++ +++++ a+++++++Ga+g+GKtt + +  ++   G+p 
  EPX73969.1 419 SRLALPIVAEEQSIMEHVFANDVVIICGATGSGKTTQVPQFLFEAGFGSPE 469
                 556667777888899999******************887776666555555 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00013      0.21      42      60 ..     442     460 ..     409     469 .. 0.78
   2 ?   -2.6   0.0       1.7   2.7e+03     160     195 ..     632     669 ..     624     674 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00013
                   EEEE--TTSSHHHHHHHHH CS
  FtsK_SpoIIIE  42 llvaGatgsGKStalntLi 60 
                   ++++GatgsGK+t +  ++
    EPX73969.1 442 VIICGATGSGKTTQVPQFL 460
                   79***********987665 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.7
                   ..................-----------B-----EEE CS
  FtsK_SpoIIIE 160 aaene..ritsLsnqgpsygvhvlvtagrelekrpslv 195
                   + e++  ++ ++ n+ p++ + v +t ++e e++ s++
    EPX73969.1 632 YIEDAydKVCKIHNRLPAGAILVFLTGQQEVEQLCSML 669
                   55666789999*****************9999998876 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   7.1e-05      0.12       8      98 ..     431     550 ..     426     568 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 7.1e-05
      AAA_30   8 aavealltsgdrvavltGpAGtGKttalkalreaweaa.g...............grviglAptgkaAkvLa...........e......elgieasti 73 
                 +++e++ +++  v+++ G+ G+GKtt + +   ++ea  g               +rv++++  +++A++L+                  e+ i+ +t 
  EPX73969.1 431 SIMEHVFAND--VVIICGATGSGKTTQVPQF--LFEAGfGspesdtpgmiavtqpRRVAAVSIAKRVAEELTgfsskvshqirFdstvnpETAIKFMTD 525
                 5678888887..9*************87665..333333356789999999999999999999999999999555555444441333333555666666 PP

      AAA_30  74 akllkrlkgrarlepgtllivDEag 98 
                   l+++l     l++ + +ivDEa 
  EPX73969.1 526 GVLIRELSTDFLLTSYSAIIVDEAH 550
                 66666666667888889******95 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00011      0.17     122     146 ..     432     456 ..     404     463 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00011
       T2SSE 122 lrkavrerglilvsGgTgsGKttll 146
                 + + v ++ ++++ G+TgsGKtt +
  EPX73969.1 432 IMEHVFANDVVIICGATGSGKTTQV 456
                 5556678889*************76 PP

>> Vps39_2  Vacuolar sorting protein 39 domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.2      0.42   6.8e+02      27      69 ..      94     136 ..      86     149 .. 0.78
   2 ?    8.8   0.1    0.0014       2.2       8      66 ..     644     702 ..     638     719 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.42
     Vps39_2  27 kdlesflekalrnslekkreeqvvkklrkaeklsveeellklr 69 
                 k+l +++e++l+++++++ +++++++ +    l+  ++l k +
  EPX73969.1  94 KRLDKYIENKLKKETSAALMAKIAEESVDTSLLYSTKDLGKPK 136
                 5688999999999999999999999988888887777766555 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.0014
     Vps39_2   8 aerldplevLdllPdelplkdlesflekalrnslekkreeqvvkklrkaeklsveeell 66 
                 ++rl++ ++L +l  + ++++l+s+l+k++++s + +++++   +++k+e++  +e++ 
  EPX73969.1 644 HNRLPAGAILVFLTGQQEVEQLCSMLRKRFNRSYRPQQRQNGRVNISKKEMSIENEDVQ 702
                 589******************************99999998888888888877776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1210 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1473  (0.0821574); expected 358.6 (0.02)
Passed bias filter:                      527  (0.0293937); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.97u 0.32s 00:00:01.29 Elapsed: 00:00:00.48
# Mc/sec: 7600.93
//
Query:       EPX73970.1  [L=277]
Description: hypothetical protein SOCG_03186 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (277 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       280  (0.0156172); expected 358.6 (0.02)
Passed bias filter:                      198  (0.0110436); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 2128.82
//
Query:       EPX73971.1  [L=295]
Description: geranylgeranyltransferase I alpha subunit Cwp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-45  150.6  17.5    3.7e-11   42.4   0.3    5.4  5  PPTA      Protein prenyltransferase alpha subunit repeat
  ------ inclusion threshold ------
       0.17   11.6   5.6         12    5.7   0.1    3.5  3  DUF4219   Domain of unknown function (DUF4219)


Domain annotation for each model (and alignments):
>> PPTA  Protein prenyltransferase alpha subunit repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.6   3.1e-09   2.8e-05       2      28 .]      62      88 ..      61      88 .. 0.93
   2 !   31.5   0.1   1.1e-11     1e-07       1      26 [.      96     121 ..      96     122 .. 0.97
   3 !   42.4   0.3   4.1e-15   3.7e-11       1      27 [.     130     156 ..     130     157 .. 0.97
   4 !   30.4   0.7   2.4e-11   2.2e-07       1      27 [.     164     190 ..     164     191 .. 0.97
   5 !   32.0   0.0   7.7e-12   6.9e-08       1      28 []     203     230 ..     203     230 .. 0.97

  Alignments for each domain:
  == domain 1  score: 23.7 bits;  conditional E-value: 3.1e-09
                HHHHHHHHHH-TT-CHHHHHHHHHHCH CS
        PPTA  2 LeltekliekdpkNYsaWnyRrwllek 28
                ++lt  li  +p +Y++W yR+ +l +
  EPX73971.1 62 FNLTCFLIMHNPAHYTVWAYRFQVLNH 88
                689999******************987 PP

  == domain 2  score: 31.5 bits;  conditional E-value: 1.1e-11
                 HHHHHHHHHHH-TT-CHHHHHHHHHH CS
        PPTA   1 ELeltekliekdpkNYsaWnyRrwll 26 
                 EL++ +++ie++ kNY++W++R+ ll
  EPX73971.1  96 ELAWLDSVIEDFQKNYQVWHHRQKLL 121
                 9**********************998 PP

  == domain 3  score: 42.4 bits;  conditional E-value: 4.1e-15
                 HHHHHHHHHHH-TT-CHHHHHHHHHHC CS
        PPTA   1 ELeltekliekdpkNYsaWnyRrwlle 27 
                 ELe+t+++   d+kNY++W+yR w+l+
  EPX73971.1 130 ELEFTKDMFASDAKNYHVWSYRLWILQ 156
                 9*************************8 PP

  == domain 4  score: 30.4 bits;  conditional E-value: 2.4e-11
                 HHHHHHHHHHH-TT-CHHHHHHHHHHC CS
        PPTA   1 ELeltekliekdpkNYsaWnyRrwlle 27 
                 EL lt+ l+e+d  N+saWn+R+++l 
  EPX73971.1 164 ELSLTSYLLEDDVYNNSAWNHRFYVLF 190
                 9************************95 PP

  == domain 5  score: 32.0 bits;  conditional E-value: 7.7e-12
                 HHHHHHHHHHH-TT-CHHHHHHHHHHCH CS
        PPTA   1 ELeltekliekdpkNYsaWnyRrwllek 28 
                 EL++ +++++k p+N+saWny +++l+k
  EPX73971.1 203 ELDFLNDKLSKSPDNQSAWNYLSGILKK 230
                 9*************************96 PP

>> DUF4219  Domain of unknown function (DUF4219)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.1     0.026   2.3e+02       4      11 ..      74      81 ..      72      85 .. 0.82
   2 ?    5.7   0.1    0.0013        12       4      12 ..     109     117 ..     108     121 .. 0.85
   3 ?    5.0   0.2    0.0022        20       2      12 ..     141     151 ..     141     152 .. 0.81

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.026
     DUF4219  4 tNYatWkl 11
                ++Y++W+ 
  EPX73971.1 74 AHYTVWAY 81
                69****85 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0013
     DUF4219   4 tNYatWklr 12 
                 +NY +W++r
  EPX73971.1 109 KNYQVWHHR 117
                 6*******9 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.0022
     DUF4219   2 dgtNYatWklr 12 
                 d +NY++W+ r
  EPX73971.1 141 DAKNYHVWSYR 151
                 568*****965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (295 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       563  (0.0314016); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.29s 00:00:00.76 Elapsed: 00:00:00.45
# Mc/sec: 1957.08
//
Query:       EPX73972.1  [L=144]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       504  (0.0281109); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.44
# Mc/sec: 985.45
//
Query:       EPX73973.1  [L=98]
Description: mRNA export receptor Nxt1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-08   34.9   0.0    2.2e-08   34.7   0.0    1.0  1  NTF2      Nuclear transport factor 2 (NTF2) domain
      0.002   18.1   0.0     0.0023   17.9   0.0    1.1  1  Mtr2      Nuclear pore RNA shuttling protein Mtr2


Domain annotation for each model (and alignments):
>> NTF2  Nuclear transport factor 2 (NTF2) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.7   0.0   2.4e-12   2.2e-08       2      96 ..       8      94 ..       7      97 .. 0.89

  Alignments for each domain:
  == domain 1  score: 34.7 bits;  conditional E-value: 2.4e-12
                HHHHHHHHHHHHHHHGGGGGGGGEEEEEEEEEETTEEEEESHHHHHHHHHHSSCSCEEEEEEEEEEEETSEGGGCEEEEEEEEEEEETTSCCEEE CS
        NTF2  2 akafvqqYYaaldagdregllalyaadaslltpegsspvkgreaIteffrslpftrielkittvdaqpdeaslstgvlvmvtGelkvddfkkrrk 96
                a+ f  +YY +l++  r++l ++y +  sl++++g+ p+++ ++    + ++p t  + k+++ d+q++ + +   +l+mv+G+ +++d+k ++ 
  EPX73973.1  8 AQNFALRYYVCLEN-GRDKLPEFY-RPSSLISWNGR-PMQS-ADLLSMIANFPPT--KTKVDDYDCQSIMG-SIANLLLMVSGSIRFADKK-AHI 94
                6899**********.9999*****.***********.8876.68999********..8*********9655.46889************96.555 PP

>> Mtr2  Nuclear pore RNA shuttling protein Mtr2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   2.6e-07    0.0023      25      93 ..      21      89 ..       5      93 .. 0.85

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 2.6e-07
                CHHHHHCCB-SSS-EEEETTEEESSHHHHHHHHHHHS--EEEEEEEEEEEEETTT.SEEEEEEEEEEEE.B CS
        Mtr2 25 kleqflqlFlkpqckivfngkPlaqaaaFlkiwlqsvvltqHaltalDfHvipgt.gtliinanckvrf.d 93
                + ++ l+ F +p++ i +ng+P+ +a+  l + ++ +  t+ ++   D+  i g+ + l++ +++ +rf d
  EPX73973.1 21 NGRDKLPEFYRPSSLISWNGRPMQSAD-LLSMIANFP-PTKTKVDDYDCQSIMGSiANLLLMVSGSIRFaD 89
                567889****************97765.788888888.79999**********87478999********44 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       298  (0.0166211); expected 358.6 (0.02)
Passed bias filter:                      286  (0.0159518); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.44
# Mc/sec: 673.84
//
Query:       EPX73974.1  [L=362]
Description: CENP-A chaperone Scm3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.7e-17   60.8   0.0    1.5e-16   59.8   0.0    1.5  1  Scm3      Centromere protein Scm3


Domain annotation for each model (and alignments):
>> Scm3  Centromere protein Scm3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.8   0.0   8.4e-21   1.5e-16       3      54 .]      43      93 ..      41      93 .. 0.96

  Alignments for each domain:
  == domain 1  score: 59.8 bits;  conditional E-value: 8.4e-21
                HHHHHHHHHHHHHHHHHHHHHHSG..GGSS--B-TTT-SB-XXXXXXXXXXX CS
        Scm3  3 llreesderlkkrwesifeKYeridfedqgDEIDlatgeivvDnGhlrelrd 54
                ++r++s++r+++ ++s+feKY+r d +d++DEIDl tg+ivv++Ghl +l++
  EPX73974.1 43 ESRRASQKRYETFLASLFEKYGR-DTSDIADEIDLSTGKIVVNRGHLLGLKN 93
                689********************.***********************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (362 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       771  (0.043003); expected 358.6 (0.02)
Passed bias filter:                      349  (0.0194657); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2520.50
//
Query:       EPX73975.1  [L=1025]
Description: cell agglutination protein mam3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    0.00012   22.1  27.9         21    5.4   0.0   10.9 12  RNA_pol_Rpb2_3  RNA polymerase Rpb2, domain 3


Domain annotation for each model (and alignments):
>> RNA_pol_Rpb2_3  RNA polymerase Rpb2, domain 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.18   3.2e+03      41      59 ..     529     547 ..     523     548 .. 0.82
   2 ?   -1.6   0.0      0.18   3.2e+03      41      59 ..     580     598 ..     574     599 .. 0.82
   3 ?    1.0   0.0     0.027   4.8e+02      41      59 ..     631     649 ..     619     651 .. 0.87
   4 ?    0.8   0.0     0.031   5.6e+02      41      59 ..     669     687 ..     663     688 .. 0.86
   5 ?    0.0   0.0     0.055   9.9e+02      41      59 ..     707     725 ..     701     726 .. 0.85
   6 !    3.7   0.1    0.0038        69      41      59 ..     743     761 ..     736     762 .. 0.86
   7 !    5.1   0.1    0.0014        25      41      59 ..     779     797 ..     774     799 .. 0.87
   8 !    5.0   0.1    0.0016        28      41      59 ..     815     833 ..     808     834 .. 0.87
   9 !    3.8   0.1    0.0036        64      41      59 ..     851     869 ..     846     870 .. 0.86
  10 ?   -0.1   0.0     0.061   1.1e+03      42      59 ..     888     905 ..     883     906 .. 0.87
  11 !    5.4   0.0    0.0012        21      42      59 ..     924     941 ..     919     943 .. 0.88
  12 !    4.9   0.0    0.0017        31      41      59 ..     959     977 ..     954     979 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.18
  RNA_pol_Rpb2_3  41 hwGriCpveTPEGencGlv 59 
                     + G+   + TP G++ G v
      EPX73975.1 529 SQGFTSTIATPSGSSPGTV 547
                     67999********998865 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.18
  RNA_pol_Rpb2_3  41 hwGriCpveTPEGencGlv 59 
                     + G+   + TP G++ G v
      EPX73975.1 580 SQGFTSTIATPSGSSPGTV 598
                     67999********998865 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.027
  RNA_pol_Rpb2_3  41 hwGriCpveTPEGencGlv 59 
                     + G+   + TP G++ G v
      EPX73975.1 631 SQGFTSTIATPSGSSAGTV 649
                     679*************987 PP

  == domain 4  score: 0.8 bits;  conditional E-value: 0.031
  RNA_pol_Rpb2_3  41 hwGriCpveTPEGencGlv 59 
                     + G+   + TP G++ G v
      EPX73975.1 669 SQGFTSTIATPSGSSAGTV 687
                     6799************987 PP

  == domain 5  score: 0.0 bits;  conditional E-value: 0.055
  RNA_pol_Rpb2_3  41 hwGriCpveTPEGencGlv 59 
                     + G+   v T+EG++ G v
      EPX73975.1 707 SQGFTSTVLTAEGTKTGTV 725
                     679999*********9987 PP

  == domain 6  score: 3.7 bits;  conditional E-value: 0.0038
  RNA_pol_Rpb2_3  41 hwGriCpveTPEGencGlv 59 
                     + G+   v TPEG++ G v
      EPX73975.1 743 SQGFTSTVVTPEGTKTGTV 761
                     67999**********9986 PP

  == domain 7  score: 5.1 bits;  conditional E-value: 0.0014
  RNA_pol_Rpb2_3  41 hwGriCpveTPEGencGlv 59 
                     + G+   v TPEG++ G v
      EPX73975.1 779 SQGFTSTVATPEGTKTGTV 797
                     67999***********987 PP

  == domain 8  score: 5.0 bits;  conditional E-value: 0.0016
  RNA_pol_Rpb2_3  41 hwGriCpveTPEGencGlv 59 
                     + G+   v TPEG++ G v
      EPX73975.1 815 SQGFTSTVATPEGTKTGTV 833
                     6799***********9986 PP

  == domain 9  score: 3.8 bits;  conditional E-value: 0.0036
  RNA_pol_Rpb2_3  41 hwGriCpveTPEGencGlv 59 
                     + G+   v TPEG++ G v
      EPX73975.1 851 SQGFTSTVVTPEGTKTGTV 869
                     569999*********9987 PP

  == domain 10  score: -0.1 bits;  conditional E-value: 0.061
  RNA_pol_Rpb2_3  42 wGriCpveTPEGencGlv 59 
                      G+   v T+EG++ G v
      EPX73975.1 888 RGFTSTVVTAEGTKTGTV 905
                     699999********9987 PP

  == domain 11  score: 5.4 bits;  conditional E-value: 0.0012
  RNA_pol_Rpb2_3  42 wGriCpveTPEGencGlv 59 
                      G+   + TPEG++ G v
      EPX73975.1 924 QGFTSTIATPEGSKAGTV 941
                     6999************87 PP

  == domain 12  score: 4.9 bits;  conditional E-value: 0.0017
  RNA_pol_Rpb2_3  41 hwGriCpveTPEGencGlv 59 
                     + G+   + TPEG++ G v
      EPX73975.1 959 YQGFTSTIATPEGSKTGTV 977
                     56999***********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1025 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       863  (0.0481343); expected 358.6 (0.02)
Passed bias filter:                      217  (0.0121033); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                        23  (0.00128284); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.27u 0.39s 00:00:01.66 Elapsed: 00:00:00.60
# Mc/sec: 5178.68
//
Query:       EPX73976.1  [L=335]
Description: ornithine cyclodeaminase family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.1e-59  201.1   0.0    2.4e-59  200.9   0.0    1.0  1  OCD_Mu_crystall  Ornithine cyclodeaminase/mu-crystallin famil
    2.2e-08   34.3   0.0    3.5e-08   33.6   0.0    1.3  1  Shikimate_DH     Shikimate / quinate 5-dehydrogenase
     0.0065   15.8   0.0      0.011   15.1   0.0    1.3  1  THF_DHG_CYH_C    Tetrahydrofolate dehydrogenase/cyclohydrolas


Domain annotation for each model (and alignments):
>> OCD_Mu_crystall  Ornithine cyclodeaminase/mu-crystallin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  200.9   0.0   3.9e-63   2.4e-59      19     317 ..      25     333 ..       7     334 .. 0.89

  Alignments for each domain:
  == domain 1  score: 200.9 bits;  conditional E-value: 3.9e-63
                      CCHHHHHHHHHHHHCC..-CE----EEEEECCGTEEEEEEEEEETTTTEEEEEEEEEETTTCCCTSSSEEEEEEEE-TTT--EEEEEE-HHHHH CS
  OCD_Mu_crystall  19 dlakaveeafrrlasg..kvkkpprvalevkdsrgelevmpaylagrellgvKlvnshpenkksglptvtalvvLndpetGvplalmdatllta 110
                      +l++a+ + f +  +   +++ p r  ++ ++++g + +mp  ++g e++gvK vn++p+n k+ lp      +L+d ++G+ la +d++ lt+
       EPX73976.1  25 ALIDALRDIFTKAIECppRLHYPIRSSVNKHETHGTMLIMPCWSPG-EYIGVKQVNVFPNNSKKNLPNLASHYLLSDANSGTHLAQLDGGELTS 117
                      5555555555554443456666667777777779************.9********************************************** PP

                      HHHHHHHHHHHHHHS-TT--EEEEE--SHHHHHHHHHHCCCS--SEEEEE-SSHHHHHHHHHHCCS...CTT-EEEC..SCHHHHTTSSEEEE- CS
  OCD_Mu_crystall 111 lRTaAvsavaakyLarkdasvlaiiGaGvqaetqlealkavldikevriydrdeeaaekfaenlqe.f.efevsack..seeeavegadivvtv 200
                       RTaA+sa+a  yL+r+da+ l i+G G  a+  + a   v++i+++ +++ + e+a+++++ +++ f ++   a k  + e av+ +di+  +
       EPX73976.1 118 RRTAAASALASTYLSRNDATSLLILGSGNVARNLIYAHCSVRPINKITVWNHRFENAAALVKSISAdFpSVTLCAIKneDLEHAVKACDIISCA 211
                      *****************************************************************988889999986225689*********** PP

                      ---SS-SB-GGGS-TT-EEEE-S--STT--SB-HHHHHCCEEEE.SHHHHHHHCCCCHCHHHTTSSTCGGEEEEHHHHHCTSS-..-S....TT CS
  OCD_Mu_crystall 201 TaakapilkaewvkpGahinavgadapgkteLdddilkradifv.dseaqareeGeiqvaiekgvlaedakvaelgeviaGkkpGRts....de 289
                      T++++pi+k +w++pG+hi +vg+  p  +e d + + +a++fv     ++ e G++  +i++g  ++++++a+l + ++ + +GR++    + 
       EPX73976.1 212 TLSTSPIVKGSWIQPGTHIDLVGGFTPKMHEVDSACVSKAEVFVdTRSGALSEAGDLLTPIKEGAFSPEDVQADLFDLCREHHKGRAQltsiQD 305
                      ********************************************55567889**********************************98444456 PP

                      SEEEEE----HHHHHHHHHHHHHHHCCC CS
  OCD_Mu_crystall 290 eitlfdsvGlaveDvaaaklvyeraeek 317
                       itlf+svG + eD+aaa l+y+  ++k
       EPX73976.1 306 AITLFKSVGDSREDLAAASLAYNTHKNK 333
                      79********************988776 PP

>> Shikimate_DH  Shikimate / quinate 5-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.6   0.0   5.9e-12   3.5e-08       2      97 ..     126     226 ..     125     232 .. 0.83

  Alignments for each domain:
  == domain 1  score: 33.6 bits;  conditional E-value: 5.9e-12
                   HHHHHHS..TT-EEEEES-SHHHH.HHHHHHHCCT-CEEEEEESSHHHHHHHHHHH....T.ET-EEEEGCGHHHHHHT-SEEEE-SSSSS-SB-HH CS
  Shikimate_DH   2 lakkkleslkekkvlliGaGemae.lvakhLlakgvkkvvvaNRtlerakelaeel....kgeeiealkleelkellaeadvvisataseepileke 93 
                   la++ l++ +    l++G G++a+ l+  h + + ++k++v N  +e+a++l++++     ++ + a+k e+l+++++++d++ +at s++pi++ +
    EPX73976.1 126 LASTYLSRNDATSLLILGSGNVARnLIYAHCSVRPINKITVWNHRFENAAALVKSIsadfPSVTLCAIKNEDLEHAVKACDIISCATLSTSPIVKGS 222
                   67777777788899********9726678899999*****************9987211145667788889***********************999 PP

                   HHHC CS
  Shikimate_DH  94 evee 97 
                   +++ 
    EPX73976.1 223 WIQP 226
                   8875 PP

>> THF_DHG_CYH_C  Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   1.8e-06     0.011      62     138 ..     187     274 ..     173     278 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.8e-06
                    EEEEE-TTSCCHHHHHCCSSEEEE-S.S-TT-B-GGGS-TT-EEEE---EEC..........-TTEEE-SB-HHHHCTTSSEE--TTT CS
  THF_DHG_CYH_C  62 tVtvchsktkdlaeitreadivvvav.GkpelikaemvkegavviDvGinrv..........ekgklvGDvdfeevkevasaitPvpg 138
                     Vt+c  k +dl++ ++  di+  a+     ++k++++++g+ +  vG  +           +k ++  D +  +++e   ++tP+++
     EPX73976.1 187 SVTLCAIKNEDLEHAVKACDIISCATlSTSPIVKGSWIQPGTHIDLVGGFTPkmhevdsacvSKAEVFVDTRSGALSEAGDLLTPIKE 274
                    79********************8775277889*********98755653222345556666666666666666666666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (335 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       420  (0.0234257); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2331.50
//
Query:       EPX73977.1  [L=592]
Description: membrane transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.1e-66  224.2  29.9    3.4e-66  223.6  29.9    1.2  1  Xan_ur_permease  Permease family
  ------ inclusion threshold ------
        4.6    7.7  19.5       0.05   14.0   1.5    3.8  4  MFS_MOT1         Molybdate transporter of MFS superfamily


Domain annotation for each model (and alignments):
>> Xan_ur_permease  Permease family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  223.6  29.9   3.7e-70   3.4e-66       4     387 ..      72     490 ..      70     492 .. 0.93

  Alignments for each domain:
  == domain 1  score: 223.6 bits;  conditional E-value: 3.7e-70
                      HHHHHHHHHHHHHHHHHHHHTTTS-..........H.HHHHHHHHHHHHHHHH.........HTTT-----EEE-GGGHHHHHGGG-....... CS
  Xan_ur_permease   4 lllglQhllamfaalvvvPllvgdalgl.aeelrqlisatllasGiatllqll.........ifgirlpillgssfafvtalmialGsa..... 82 
                      ++lg+Qh lam++++  +P +++++++l +e++++l+sa+l++s++ tl+ ++         ++g+++ ++lg+sf+ v++  ++  ++     
       EPX73977.1  72 FILGFQHALAMVGGVTSPPRIIAASANLtIEQTNYLVSAALISSALLTLINIIrfkipktnyYIGTGMLSVLGISFTSVSVAPKVFSQMyqngy 165
                      799*************************99*********************9999*************************55555555558899 PP

                      ...........HHHHHHHHHHHHHHHHHHHHHHHTT-SH.HHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSS-...BTT............B- CS
  Xan_ur_permease  83 .........edieialagllgallvagvlfilisltglrgrlarlipPvvtgpvvlliGlslaqiavkkvgggwaa.veg...........ltv 155
                                   +a+++++ ++ + ++l i++s++  r  l rl+pP+vtgpvvlliG sl+ +++++ +gg    +             l  
       EPX73977.1 166 cptasdgtkLPCPDAYGAFIATCCICSLLEITMSFIPPR-FLKRLFPPIVTGPVVLLIGASLIMTGLEDWAGGSGCtSRQtmcpsnsaphpLYW 258
                      9999999887789999999999999*************8.**************************9998888643332223444445666788 PP

                      --HHHHHHHHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHHHHHHHTTSSHHHHS-SS-----------HH..H.HHHHTHHH.HHHHHHHH CS
  Xan_ur_permease 156 vslkllllavvvllvilllsvflkglfsqlpiLigiiagwllalfmgivnlspevseapwfqlpsplkfgtplfnlgliltvlavalvavvesv 249
                      +s ++++l++ v ++i+++ +f  +l+++ +++ig+++g+++++++   + s  +++ap++++     f    +  +++l +la+++v+++e++
       EPX73977.1 259 GSAQFIGLGFSVFATIIIVERFGPPLMKTTSVVIGLVIGMIISAATHYWDRSI-IDAAPVITFNWVHTFRLR-LYGPAVLPILAMYIVNMMEAI 350
                      999***********************************************999.********9877666666.8999***************** PP

                      HHHHHHHHHHTS-TII...IIIHHHHHHHHHHHHHHHHHHT---EEE-HHHHHHHHHHTB--HHHHHHHHHHHHHHT--HHHHHHHTTS-HHHH CS
  Xan_ur_permease 250 Gdiravakvvgrslkp...kpdlrralladGlatllsgllGalpvttyaeniGvvaltkvasrrvmvtagvilillglipklaallssIPepvl 340
                      Gdi+a+++v+ +++++   +++++ ++l dG+++ll++l+  +p tt+a+n+Gv++ltk a+r+ ++  +++l+++g+++k+aa + +IP +vl
       EPX73977.1 351 GDITATSDVSMLEVDGpefDSRVQGGVLCDGTSSLLASLMTITPLTTFAQNNGVISLTKCANRKAGFFCALVLLCMGIFGKFAAVFVAIPNAVL 444
                      **************9999**************************************************************************** PP

                      HHHHHHHHHHHHHHHHHHHHHTTS-SHHHHHHHHHHHHHHHH----- CS
  Xan_ur_permease 341 gGvllvvfgmiaasgvsnlqtvdldsarnllivavslvlGlgvatvp 387
                      gG+++ +f+++  sg+++++++ ++ +rn +i+  sl+lG+g   vp
       EPX73977.1 445 GGMTTFLFSSVTTSGIAIISQIPFN-RRNRFILTASLTLGMGSILVP 490
                      *************************.***************987776 PP

>> MFS_MOT1  Molybdate transporter of MFS superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   1.9     0.012   1.1e+02      39     101 ..      76     141 ..      60     153 .. 0.69
   2 ?    0.8   0.1      0.07   6.2e+02      71     111 .]     183     226 ..     172     232 .. 0.70
   3 ?   -2.3   0.1      0.64   5.7e+03      53      76 ..     270     293 ..     256     314 .. 0.48
   4 ?   14.0   1.5   5.6e-06      0.05      69     106 ..     413     450 ..     335     453 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.012
    MFS_MOT1  39 mnlltglfggvPmc..hgAgglaaqyrfgartgaagillGlvllllgltg.llerllrliPksvlg 101
                 ++ +++++ggv  +   +A+ +  + ++ + +++a+++ +++l l+ +++  + + + +i + +l 
  EPX73977.1  76 FQHALAMVGGVTSPprIIAASANLTIEQTNYLVSAALISSALLTLINIIRfKIPKTNYYIGTGMLS 141
                 556667777777777767777777766777777777777777777777765666666666655555 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.07
    MFS_MOT1  71 agillGlvllllgltg...llerllrliPksvlgglllgaGleL 111
                 a i + +++ ll +t+     + l rl+P  v g ++l  G +L
  EPX73977.1 183 AFIATCCICSLLEITMsfiPPRFLKRLFPPIVTGPVVLLIGASL 226
                 55555566666666664322345667899999999999888876 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 0.64
    MFS_MOT1  53 hgAgglaaqyrf.gartgaagillG 76 
                   A +++ + rf ++ + +  +++G
  EPX73977.1 270 VFATIIIVE-RFgPPLMKTTSVVIG 293
                 333333333.332111222222222 PP

  == domain 4  score: 14.0 bits;  conditional E-value: 5.6e-06
    MFS_MOT1  69 gaagillGlvllllgltgllerllrliPksvlgglllg 106
                   ag++ +lvll++g++g + ++  +iP++vlgg+  +
  EPX73977.1 413 RKAGFFCALVLLCMGIFGKFAAVFVAIPNAVLGGMTTF 450
                 5799*******************************876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (592 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       645  (0.0359752); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.44
# Mc/sec: 4015.52
//
Query:       EPX73978.1  [L=591]
Description: azole resistance protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.8e-42  143.5  56.1    8.9e-42  143.3  52.4    2.3  2  MFS_1     Major Facilitator Superfamily
    3.1e-15   55.6  24.0    4.2e-15   55.2  24.0    1.2  1  TRI12     Fungal trichothecene efflux pump (TRI12)
    6.3e-14   51.7   8.8    6.3e-14   51.7   8.8    3.1  3  Sugar_tr  Sugar (and other) transporter
     0.0013   19.0   3.7       0.15   12.4   0.0    4.0  4  Wzz       Chain length determinant protein


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.3  52.4     2e-45   8.9e-42       1     352 [.      92     491 ..      92     492 .. 0.91
   2 ?   -3.7   0.1      0.98   4.4e+03     152     172 ..     543     561 ..     536     574 .. 0.55

  Alignments for each domain:
  == domain 1  score: 143.3 bits;  conditional E-value: 2e-45
       MFS_1   1 lllaaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalg.lllllfasslwlllvlrvlqGlg 98 
                 l+l++fl+al+ +i+++a+p ++ +++  + s+++++ t+y+l+  +  +++G +s+ +Gr+ vl  + ++f+lg +l+++ a s+ +l+++r++qG+g
  EPX73978.1  92 LMLCIFLAALDQTIITTAIP-TIVKSFD-NSSSYSWIGTAYSLAETAVLPFAGIMSEVLGRKVVLYSSTIIFLLGsALCGA-AKSMIWLILCRAVQGIG 187
                 689*****************.9******.**********************************************555555.544446*********** PP

       MFS_1  99 agalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpeepperkrkspkeee......... 188
                 +g++++++ ++iad++p + r+ ++g+++a++++++++gpl+gg++++   Wr++f+i+ + + +a+   +++l   p++r  +s+  +          
  EPX73978.1 188 GGGIMSLVTIVIADITPLQTRSYYTGCFGATWGIASVMGPLIGGAISQKTTWRWIFFINLPTGGIALTTLIFFLNLIPKPRTSFSQFMKTfdflgiiti 286
                 ******************************************************************8866688888888888888888889******** PP

       MFS_1 189 ...........................................kgtgpaplvp..awkallkdpvlwillialllfffgfsglltllplylqevlglsg 242
                                                              t++ ++ p  a+k +        ++++++l   ++s++++++p+ylq v g + 
  EPX73978.1 287 tigvvlfllglslgsttgvwkhpnilcyliigilclvvfavneTYTKRVKIMPpsAFKTISLTS----IMVTSFLHYYIMSTITYYIPVYLQNVKGDG- 380
                 *********************************9999999999666666666666688888888....9999999999********************. PP

       MFS_1 243 lllaglllallalvgailallagrlsdrlgrrrrlllallllllaalglallavtssavllllvlvliGf.glgfvfpsllalasdlappeeagtasgl 340
                  l++g+    +a+v+ + + ++g+ + +l + ++ ++++ ++lla +g +++ ++++ +  +++++ ++  g+g  f + l +++ ++pp  ++t  ++
  EPX73978.1 381 PLMSGVHTLSFAVVSSVTSAISGFSIGKLRNYTYFMIGGWIILLAGAGSMIAIHYKTDISRVMGFIALTAvGVGNLFQPNLIALQASVPPATMATSCSA 479
                 79999888888888889999****99**9999999999999999999999999997777777755555555**************************** PP

       MFS_1 341 fntagslggalg 352
                 f+++++ g+++g
  EPX73978.1 480 FMLLRNMGSSIG 491
                 *********998 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 0.98
       MFS_1 152 avfyilaivsllafvlfllll 172
                  +++++ ++++l+++l   +l
  EPX73978.1 543 MIWIVNVPFAALGAIL--SFL 561
                 3444444444444443..332 PP

>> TRI12  Fungal trichothecene efflux pump (TRI12)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.2  24.0   9.3e-19   4.2e-15      63     342 ..     106     378 ..      81     498 .. 0.80

  Alignments for each domain:
  == domain 1  score: 55.2 bits;  conditional E-value: 9.3e-19
       TRI12  63 sasalpnilqdvgqsensslfstlwttgqavsilvmgrltdrfgrrpfvilthilglvgaivgctatkfntllaamtllgvaagpaga.splfvgelms 160
                  ++a+p i++   +s   s + t +++ ++  +   g +++ +gr+ ++  + i+ l+g+ +  +a+ +  l+ + ++ g+  g   +   +++ ++  
  EPX73978.1 106 ITTAIPTIVKSFDNSSSYSWIGTAYSLAETAVLPFAGIMSEVLGRKVVLYSSTIIFLLGSALCGAAKSMIWLILCRAVQGIGGGGIMSlVTIVIADITP 204
                 4689**************************9999*************************999888888999999999****988776626788999998 PP

       TRI12 161 nktkflgllivsipvvvtsglspylgqrlaiqgswrwifyiyiitsaiavllivvwyyppsfaqlhgk.kvrkreelakldwigiilvivgvslfllgv 258
                  +t+        +   + s ++p +g  ++ + +wrwif+i + t  ia++ ++ +       +l  k +++  + +   d++gii +++gv lfllg+
  EPX73978.1 205 LQTRSYYTGCFGATWGIASVMGPLIGGAISQKTTWRWIFFINLPTGGIALTTLIFFL------NLIPKpRTSFSQFMKTFDFLGIITITIGVVLFLLGL 297
                 888866666666666666779****************************99887643......34444145556667779******************* PP

       TRI12 259 swggkpnspwnsakviglissglgslvvfalyevygkpvrpivppalfkdtrgfvcillissimgamnlslviiypqqvvnifg 342
                 s g      w+  +++  +  g+ +lvvfa+ e y k v+ i+pp+ fk    +  i++ s +   +  +++   p  + n+ g
  EPX73978.1 298 SLGST-TGVWKHPNILCYLIIGILCLVVFAVNETYTKRVK-IMPPSAFKT-ISLTSIMVTSFLHYYIMSTITYYIPVYLQNVKG 378
                 *9875.679****************************997.78*****95.566677666655444444444444555555544 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.7   8.8   1.4e-17   6.3e-14      44     190 ..     119     259 ..      56     266 .. 0.86
   2 ?    1.4   1.3     0.025   1.1e+02     146     194 ..     282     330 ..     268     338 .. 0.74
   3 ?   -2.1  12.1      0.29   1.3e+03      37     157 ..     375     498 ..     341     510 .. 0.68

  Alignments for each domain:
  == domain 1  score: 51.7 bits;  conditional E-value: 1.4e-17
                 ...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHH CS
    Sugar_tr  44 ssvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvsl 142
                  s+ +++i  ++++ +++   fag++++++GRk +l  ++++f+ g++l++aak   s+  li++R + Gig G++  lv++ i+ i+p + R++ +++
  EPX73978.1 119 NSSSYSWIGTAYSLAETAVLPFAGIMSEVLGRKVVLYSSTIIFLLGSALCGAAK---SMIWLILCRAVQGIGGGGIMSLVTIVIADITPLQTRSYYTGC 214
                 4678899999********************************************...9999************************************** PP

                 HHHHHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHHHHHHHHHHGGG CS
    Sugar_tr 143 yqlaitfGilvaaifglglnktsnadgwrillglqlvpallllilllf 190
                 +   + +  +++  +g ++++ +    wr+ ++++l    + l  l+f
  EPX73978.1 215 FGATWGIASVMGPLIGGAISQKTT---WRWIFFINLPTGGIALTTLIF 259
                 *99999999999988887776666...*****9999887655544433 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.025
                 HHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHHHHHHHHHHGGGS--- CS
    Sugar_tr 146 aitfGilvaaifglglnktsnadgwrillglqlvpallllilllflPES 194
                 +i++  +    f lgl+  s +  w+ +  l++++  +l+++++ + E+
  EPX73978.1 282 GIITITIGVVLFLLGLSLGSTTGVWKHPNILCYLIIGILCLVVFAVNET 330
                 444444444455566666666778***********************98 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 0.29
                 SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHH.HHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS... CS
    Sugar_tr  37 sksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslli.aavlfvigavlqaaakgknsvevlivgRvlvGigvGlasvlvPmyisEiA... 131
                 +++ +    + sg+ + +f v++ ++s ++g+ + ++ +   ++i + +++++ga  ++a++ + ++ +  v+ +++  +vG+ + + P +i+  A   
  EPX73978.1 375 NVKGDG--PLMSGVHTLSFAVVSSVTSAISGFSIGKLRNYTYFMIgGWIILLAGAGSMIAIH-Y-KTDISRVMGFIALTAVGVGNLFQPNLIALQAsvp 469
                 333333..367899999999999999999999988887777777724455555555555555.4.6777777777888888888888888888777675 PP

                 ...-SCCHHHHHHHHHHHHHHHHHHHHHH CS
    Sugar_tr 132 ...pkklRgalvslyqlaitfGilvaaif 157
                     ++ ++a++ l +++ ++Gi ++a++
  EPX73978.1 470 patMATSCSAFMLLRNMGSSIGIAIGAVI 498
                 33333445677777777777777777765 PP

>> Wzz  Chain length determinant protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.3      0.11     5e+02       8      38 ..     143     173 ..     140     178 .. 0.82
   2 ?   -1.9   0.0      0.92   4.1e+03      15      35 ..     174     194 ..     165     196 .. 0.72
   3 ?    3.0   0.2     0.028   1.2e+02      25      54 ..     316     344 ..     306     370 .. 0.72
   4 !   12.4   0.0   3.3e-05      0.15       7      53 ..     532     578 ..     531     589 .. 0.80

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.11
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
         Wzz   8 LlsvLwkrkklIilvtllfallaviyaflat 38 
                 ++s++  rk+++   t++f+l++++   + +
  EPX73978.1 143 IMSEVLGRKVVLYSSTIIFLLGSALCGAAKS 173
                 67889999**************998766655 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.92
                 XXXXXXXXXXXXXXXXXXXXX CS
         Wzz  15 rkklIilvtllfallaviyaf 35 
                  ++lI++ ++ ++ +++i ++
  EPX73978.1 174 MIWLILCRAVQGIGGGGIMSL 194
                 568888888888888887776 PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.028
                 XXXXXXXXXXXXXXX-EEEEEEEES--CHH CS
         Wzz  25 lfallaviyaflatpkYtataqilvpekkq 54 
                 + + +  +++f++ ++Yt +  i +p+  +
  EPX73978.1 316 I-IGILCLVVFAVNETYTKRVKIMPPSAFK 344
                 2.223345669**************99765 PP

  == domain 4  score: 12.4 bits;  conditional E-value: 3.3e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EEEEEEEES--CH CS
         Wzz   7 eLlsvLwkrkklIilvtllfallaviyaflatpkYtataqilvpekk 53 
                 ++l++L + +++I++v + fa+l++i++fl ++   ++ +++ +e+k
  EPX73978.1 532 HILNALADAIRMIWIVNVPFAALGAILSFLTKQNKLSQSVLQYDESK 578
                 5899*************************999876666666655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (591 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       937  (0.0522617); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.64u 0.28s 00:00:00.92 Elapsed: 00:00:00.44
# Mc/sec: 4012.37
//
Query:       EPX73979.1  [L=328]
Description: palmitoyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-32  112.3  18.7    1.7e-32  112.3  18.7    1.8  2  DHHC      DHHC palmitoyltransferase
  ------ inclusion threshold ------
       0.93    9.0   3.5        1.5    8.3   3.5    1.3  1  QueC      Queuosine biosynthesis protein QueC


Domain annotation for each model (and alignments):
>> DHHC  DHHC palmitoyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.2      0.17   1.5e+03      99     104 ..      56      61 ..      11      93 .. 0.55
   2 !  112.3  18.7   1.9e-36   1.7e-32       5     133 ..      96     220 ..      92     221 .. 0.93

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.17
        DHHC  99 llvlsl 104
                 l++l++
  EPX73979.1  56 LYILMV 61 
                 111111 PP

  == domain 2  score: 112.3 bits;  conditional E-value: 1.9e-36
        DHHC   5 lkfCstcniykpprskHcrvCnrcvlrfDHhCpwlnnciGerNykyFllfllylllllilalvlllialvklveeekkseflavtllkkllsilllvls 103
                 +++Cs+c +yk +r++Hc++C++cvlr+DHhC w+ nciG++N+k F+l++lyl+++++  ++ +++a++k ++  + +   ++  +       l++++
  EPX73979.1  96 PRYCSKCLQYKADRTHHCSRCDSCVLRMDHHCLWFRNCIGFHNHKLFYLVCLYLTTYSLTSVYSTFMAITKHFTAANGTISSVYLVFW----GSLFAFA 190
                 69***************************************************************************98877766554....7888888 PP

        DHHC 104 llfllllgllllfhlylilrnlTtieamkk 133
                 + + +++++++++h++l+++n+Tt e mk+
  EPX73979.1 191 FGLSIVMVAFTVYHTFLLFQNITTLESMKS 220
                 8999999999999***************96 PP

>> QueC  Queuosine biosynthesis protein QueC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   3.5   0.00016       1.5     184     203 ..     105     123 ..      74     127 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00016
                 TTS.-BTTTTSSSHHHHHHH CS
        QueC 184 YegeeegkaCgeCdaCalRk 203
                 Y++ +++++C +Cd+C+lR 
  EPX73979.1 105 YKA-DRTHHCSRCDSCVLRM 123
                 666.7789**********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1171  (0.0653132); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 2505.96
//
Query:       EPX73980.1  [L=523]
Description: IMP dehydrogenase Gua1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   1.5e-132  441.9   4.1   1.7e-132  441.7   4.1    1.0  1  IMPDH         IMP dehydrogenase / GMP reductase domain
      1e-16   61.1   2.3    5.8e-07   29.8   0.1    3.1  3  CBS           CBS domain
    1.6e-09   37.6   1.4    2.1e-06   27.4   1.2    2.2  2  NMO           Nitronate monooxygenase
    1.1e-07   31.2   0.7    2.1e-07   30.3   0.7    1.4  1  FMN_dh        FMN-dependent dehydrogenase
    0.00048   19.7   4.7     0.0015   18.0   3.4    2.4  3  His_biosynth  Histidine biosynthesis protein
     0.0039   16.3   0.8        0.6    9.1   0.0    2.2  2  Dus           Dihydrouridine synthase (Dus)
  ------ inclusion threshold ------
      0.019   14.4   0.8      0.053   12.9   0.2    2.0  1  Aldolase      KDPG and KHG aldolase
        0.2   10.9   2.9       0.28   10.5   0.9    2.0  2  ThiG          Thiazole biosynthesis protein ThiG


Domain annotation for each model (and alignments):
>> IMPDH  IMP dehydrogenase / GMP reductase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  441.7   4.1  7.4e-136  1.7e-132       1     343 [.      36     511 ..      36     513 .. 0.97

  Alignments for each domain:
  == domain 1  score: 441.7 bits;  conditional E-value: 7.4e-136
                 E--GGGEEEE---B-S-GGGSB--EESSTTEEESSSEEE-SSTTT-SHHHHHHHHHTTSEEEE-SSS-HHHHHHHHHHHHTS................. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................. RF
       IMPDH   1 gltfddvllvpaksevlpkevdlktkltkkiklniPlvsaamdtvtesemAialareGgigvihknlsieeqaeevkkvkrs................. 82 
                 gltf+d+l++p++++++p++v+l+tk++++++l++P+vs++mdtvte++mAi +a +Ggigvih+n+++eeqa++v+kvk++                 
  EPX73980.1  36 GLTFNDFLILPGYIDFVPNSVSLETKISRNVTLKTPFVSSPMDTVTEDQMAIYMALSGGIGVIHHNCTAEEQADMVRKVKKFengfitdpvvfspehtv 134
                 79************************************************************************************************* PP

                 ................................................................................................... CS
                 ................................................................................................... RF
       IMPDH  83 ................................................................................................... 82 
                                                                                                                    
  EPX73980.1 135 gdvlkiketkgfsgipvtdtgklrgkligivtsrdvqfhrdvdtkvtevmtkdnlittregisleraneilrnskkgklpvvdgdfnlvallsltdlmk 233
                 *************************************************************************************************** PP

                 ....TTSXBX.TTSXB-EEEEE-SSTTHHHHHHHHHHTT-SEEEEE-STSSSHHHHHHHHHHHHHTTTSEEEEEEE-SHHHHHHHHHTT-SEEEE-SS- CS
                 ....xxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       IMPDH  83 ....pnaakd.ekgrllvgaavgvkedalervkalveagvdvlvvdsahghsekvleavkeikkkveeveviaGnvataegakaLieagadavkvGiGp 176
                     pna+k  e+++l+v+aa+g+++d+  r+k l+eagvdv+v+ds++g+s+ ++e++k ik+++++++viaGnv+t+e+a++Li+agad++++G+G+
  EPX73980.1 234 nlnfPNASKSaETKQLMVAAAIGTRDDDRLRLKLLAEAGVDVVVIDSSQGNSHFQIEMIKFIKSSFPKLDVIAGNVVTREQAANLIAAGADGLRIGMGS 332
                 ****9999975889************************************************************************************* PP

                 STTBHHHHHCSB---HHHHHHHHHHHHCTCT-EEEEES---SHHHHHHHHHTT-SEEEESCCCTTBTTSSSEEEEETTEEEEEEEETTSHHHHHH.... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.... RF
       IMPDH 177 GsiCttrvvagvGvpqltAvaevaeaakkagvpviaDGGikysgdivkAlaaGadavmlGsllagteEspgeviliegrkyKeyrGmgslgamkk.... 271
                 G+ C+t++v+++G+pq+tA+a+vae+a+++gv viaDGGi++ g++vk+l++Ga  vm+Gsllagt+Espge+++ +g++yK+yrGmgs++am+     
  EPX73980.1 333 GAACITQEVMACGRPQATAIAQVAEFASQFGVGVIADGGIQNIGHMVKSLTLGATGVMMGSLLAGTTESPGEYYVRDGQRYKSYRGMGSIAAMEGtgvn 431
                 *********************************************************************************************444454 PP

                 ..-SS-TTS-...--SS-SBEEEEEE--B-HHHHHHHHHHHHHHHHHHHT-SSHHHHHH.....H-EEEEE-HHHHHHHS CS
                 ..xxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxx RF
       IMPDH 272 ..gskdryfqk.keklvpeGvegrvpykgsvkevveqlvgglrsgmgylGaktieelke.....kakfvritaaglkesh 343
                    s+ ryf++ ++  v++Gv+g v +kgs+ +++ +l++gl+++++++G++++e+l+e     +++f+ +++a+++e++
  EPX73980.1 432 knASTGRYFSEnDSVRVAQGVSGLVVDKGSLLRFLPYLYTGLQHACQDIGVRSLEKLHEavnahEVRFELRSSAAIREGD 511
                 434888***953669*******************************************99999999***********986 PP

>> CBS  CBS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   0.1   2.9e-10   6.5e-07       7      51 ..     123     170 ..     111     173 .. 0.85
   2 !   29.8   0.1   2.6e-10   5.8e-07       1      55 [.     180     235 ..     180     236 .. 0.92
   3 ?   -2.6   0.0       3.4   7.7e+03      28      41 ..     450     461 ..     447     463 .. 0.73

  Alignments for each domain:
  == domain 1  score: 29.7 bits;  conditional E-value: 2.9e-10
                 SSCEEEETTSBHHHHHHHHHHHTSSEEEEEETTT....BEEEEEEHHHH CS
         CBS   7 rdvvtvppdttleealelmrekgvsrlPVVdedg....klvGivtlrDl 51 
                 +d+v+++p+ t++++l++ + kg+s++PV+d  g    kl+Givt rD+
  EPX73980.1 123 TDPVVFSPEHTVGDVLKIKETKGFSGIPVTD-TGklrgKLIGIVTSRDV 170
                 7999**************97788*******4.6635446*********7 PP

  == domain 2  score: 29.8 bits;  conditional E-value: 2.6e-10
                 HHHHSBS.SCEEEETTSBHHHHHHHHHHHTSSEEEEEETTTBEEEEEEHHHHHHHH CS
         CBS   1 Vgdimtr.dvvtvppdttleealelmrekgvsrlPVVdedgklvGivtlrDllral 55 
                 V+++mt+ +++t ++  +le a e++r+++ + lPVVd+d +lv +++l+Dl++ l
  EPX73980.1 180 VTEVMTKdNLITTREGISLERANEILRNSKKGKLPVVDGDFNLVALLSLTDLMKNL 235
                 789****8999***************976679*****9999***********9865 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 3.4
                 HTSSEEEEEETTTB CS
         CBS  28 kgvsrlPVVdedgk 41 
                  gvs+l VVd  g 
  EPX73980.1 450 QGVSGL-VVD-KGS 461
                 57999*.**5.665 PP

>> NMO  Nitronate monooxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0   0.00062       1.4       7      59 ..      65     116 ..      59     141 .. 0.88
   2 !   27.4   1.2   9.5e-10   2.1e-06      60     238 ..     215     408 ..     207     419 .. 0.72

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00062
         NMO   7 llkikppvvqpgmggiskarLaaavsnaGgLGvlasgyltaDrlakeirkvka 59 
                  ++ k p v ++m  ++++++a   +  Gg+Gv+     ta + a+ +rkvk+
  EPX73980.1  65 NVTLKTPFVSSPMDTVTEDQMAIYMALSGGIGVIH-HNCTAEEQADMVRKVKK 116
                 56789999**************************9.88899999999999997 PP

  == domain 2  score: 27.4 bits;  conditional E-value: 9.5e-10
         NMO  60 ltdkPfgvnlflpkkdaadra..ekykkeleeaalelnieegvr..fyrkvevvldekvevvsfgfgl.pteevvarlkeagv......vliptissvk 147
                 ++d  f++  +l+  d++ +    ++ k  e + l ++   g r  +  +++++++ +v+vv +   + ++++ ++  k+         v+ + + + +
  EPX73980.1 215 VVDGDFNLVALLSLTDLMKNLnfPNASKSAETKQLMVAAAIGTRddDRLRLKLLAEAGVDVVVIDSSQgNSHFQIEMIKFIKSsfpkldVIAGNVVTRE 313
                 567778888888888888776667788888888888888888883344456677777999887765441445554444433221111123445667789 PP

         NMO 148 earkvearGaDalivqGpeaGGhqGtpevgd..kglfaLvpqvldavd...iPviAaGGiidrrgvaaaLalGAsgvqigtrfLltkesdakdahk 238
                 +a  ++a+GaD l + G+ +G    t ev    + + + ++qv++  +   + viA GGi +   +   L+lGA gv +g+ + +t es+ + +++
  EPX73980.1 314 QAANLIAAGADGLRI-GMGSGAACITQEVMAcgRPQATAIAQVAEFASqfgVGVIADGGIQNIGHMVKSLTLGATGVMMGSLLAGTTESPGEYYVR 408
                 99999******9954.55555544433443334777788888888887899**************************************9887776 PP

>> FMN_dh  FMN-dependent dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.3   0.7   9.3e-11   2.1e-07     185     302 ..     260     394 ..     212     408 .. 0.75

  Alignments for each domain:
  == domain 1  score: 30.3 bits;  conditional E-value: 9.3e-11
                 H..........THHHH..HHCCCHB-TC--HHHHHHHHHHHS.SEEEEEEE-SHHHHHHHHHTTESEEEE--GGG......TSSTT---HHHCHHHHHH CS
      FMN_dh 185 l........kkasaaa..efvgkqldpsltwddikwlreqtk.lplvvKGvltaedakraveaGvdgivvSNHGG......RqldgapatidvLpeive 266
                          ++a       + ++q +++++ + ik +++  + l ++   v+t e a ++++aG+dg+ +    G        +    +   ++ +++e
  EPX73980.1 260 DdrlrlkllAEAGV-DvvVIDSSQGNSHFQIEMIKFIKSSFPkLDVIAGNVVTREQAANLIAAGADGLRIGMGSGaacitqEVMACGRPQATAIAQVAE 357
                 35555544322222.13466777889999*********998659999999********************99999888987666666677777777777 PP

                 HH...SS-EEEESS--SHHHHHHHHHTT-SEEEESHH CS
      FMN_dh 267 avgg.rievlvDgGirrGsDvlkAlalGAdavllGRp 302
                  + +  + v++DgGi++  +++k l lGA++v++G  
  EPX73980.1 358 FASQfGVGVIADGGIQNIGHMVKSLTLGATGVMMGSL 394
                 776645****************************965 PP

>> His_biosynth  Histidine biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       0.5   1.1e+03     188     206 ..      83     101 ..      60     113 .. 0.81
   2 !   18.0   3.4   6.7e-07    0.0015      73     223 ..     248     395 ..     225     400 .. 0.77
   3 ?   -3.6   0.0       2.7   6.1e+03      80      98 ..     480     498 ..     477     509 .. 0.70

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.5
                   HHHSSEEEEESS--SHHHH CS
  His_biosynth 188 eavkipviasGGvgsledl 206
                   +++ i +  sGG+g + + 
    EPX73980.1  83 DQMAIYMALSGGIGVIHHN 101
                   678999999****999885 PP

  == domain 2  score: 18.0 bits;  conditional E-value: 6.7e-07
                   SSEEEEESSSSSHHHH..HHHHHCT-SEEEESHHHHH-THHHHHHHHHHCGGGEEEEEEEEECEEEEETTTTEEEEEEHHHHHHHHHHTT-S...EE CS
  His_biosynth  73 fipvqvGGGIrsledv..eelleagadkviigtaavknpelikelaekfgsqkivvaiDarrgykvaikgwreetgldavelakkleelgag...ei 164
                   ++ v    G r+ +++  + l eag+d v+i ++   n++++ e+++++ s   +  +D+ +g +v++++   +    ++    +  + g+g   + 
    EPX73980.1 248 QLMVAAAIGTRDDDRLrlKLLAEAGVDVVVIDSSQG-NSHFQIEMIKFIKS--SFPKLDVIAG-NVVTREQAAN----LIAAGADGLRIGMGsgaAC 336
                   555555556666665411456789999999999865.66688889987777..77889*9999.7877777666....5555555555554311168 PP

                   EEEETTTTTTSS---HHHHHHHHHHHSSEEEEESS--SHHHHHHHHHTTCSEEEESHHH CS
  His_biosynth 165 lltdidrdGtlsGpdleltkelaeavkipviasGGvgsledlkelksegvdavivgsal 223
                   + +++ + G  +   + ++ e+a+++ + via GG++++ ++ +  + g+ +v++gs+l
    EPX73980.1 337 ITQEVMACGRPQATAIAQVAEFASQFGVGVIADGGIQNIGHMVKSLTLGATGVMMGSLL 395
                   999*****************************************************998 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 2.7
                   SSSSSHHHHHHHHHCT-SE CS
  His_biosynth  80 GGIrsledveelleagadk 98 
                    G+rsle+++e+++a+  +
    EPX73980.1 480 IGVRSLEKLHEAVNAHEVR 498
                   5899999998888876555 PP

>> Dus  Dihydrouridine synthase (Dus)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.5   0.1    0.0033       7.5     164     215 ..     281     331 ..     243     337 .. 0.83
   2 !    9.1   0.0   0.00027       0.6     165     214 ..     345     393 ..     338     414 .. 0.87

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0033
                 CTT-CG--CHHHHHHHHH-S.S-EEEESS--SHHHHHHHHHHH--SEEEESCH CS
         Dus 164 qnyegtadweaIkevkqavs.ipviaNGdIkdaedaqaileetGadgvmigrg 215
                  + + + ++e Ik +k +++ + via G++ ++e+a + ++  Gadg+ ig g
  EPX73980.1 281 SQGNSHFQIEMIKFIKSSFPkLDVIA-GNVVTREQAANLIAA-GADGLRIGMG 331
                 4556688999**********899888.*********999998.*****99976 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00027
                 TT-CG--CHHHHHHHHH-SS-EEEESS--SHHHHHHHHHHH--SEEEESC CS
         Dus 165 nyegtadweaIkevkqavsipviaNGdIkdaedaqaileetGadgvmigr 214
                 ++ +   +++++e   ++ + via G+I+++  + + l   Ga gvm+g 
  EPX73980.1 345 GRPQATAIAQVAEFASQFGVGVIADGGIQNIGHMVKSLTL-GATGVMMGS 393
                 5556677889999999999*******************99.******995 PP

>> Aldolase  KDPG and KHG aldolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.2   2.4e-05     0.053      14      82 ..     253     324 ..     241     342 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2.4e-05
                 E--SSGGGHHHHHHHHHHTT--EEEEET...TSTTHHHHHHHHHHH-TTSEEEEES--SHHHHHHHHHCT-S CS
    Aldolase  14 ivikdkedalplaeaLvagGlrvlevtl...rteaaldairvlrkerpdllvgaGtvlnaeqlaeakeaGaq 82 
                  +i   +d     + L++ G+ v+ +      ++  +++i+ ++   p+l v aG v+++eq+a+  +aGa+
  EPX73980.1 253 AAIGTRDDDRLRLKLLAEAGVDVVVIDSsqgNSHFQIEMIKFIKSSFPKLDVIAGNVVTREQAANLIAAGAD 324
                 44555555555678899999999988752224667899********************************98 PP

>> ThiG  Thiazole biosynthesis protein ThiG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1      0.36     8e+02     132     201 ..     260     326 ..     255     353 .. 0.69
   2 ?   10.5   0.9   0.00012      0.28     166     211 ..     354     399 ..     330     403 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.36
                 S-HHHHHHHHHTT-SEBEEBSSSTTS----S..-HHHHHHHHHH-.SS-BEEES---SHHHHHHHHHTT-SEE CS
        ThiG 132 dDlvlarrleevGcaavmPlaapiGsglGll..nkealkiiieea.kvPvivDAGigspsdaaqamelGadav 201
                 dD +  + l e+G+ +v+     i s++G +  + e++k+i +++ k+ vi    + + ++aa+ +  Gad++
  EPX73980.1 260 DDRLRLKLLAEAGVDVVV-----IDSSQGNShfQIEMIKFIKSSFpKLDVIAG-NVVTREQAANLIAAGADGL 326
                 566666777777877775.....555555441145678888888767776643.3566677888888888875 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00012
                 HHHHHHHH-SS-BEEES---SHHHHHHHHHTT-SEEEESHHHHTSS CS
        ThiG 166 alkiiieeakvPvivDAGigspsdaaqamelGadavllntavaeak 211
                 ++  + +++ v vi D Gi +  + ++++ lGa++v++ + +a ++
  EPX73980.1 354 QVAEFASQFGVGVIADGGIQNIGHMVKSLTLGATGVMMGSLLAGTT 399
                 4556678899****************************99888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (523 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       634  (0.0353617); expected 358.6 (0.02)
Passed bias filter:                      544  (0.0303419); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.61u 0.28s 00:00:00.89 Elapsed: 00:00:00.43
# Mc/sec: 3671.92
//
Query:       EPX73981.1  [L=887]
Description: kinesin-like protein Klp5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   2.6e-118  394.8   0.0     9e-117  389.7   0.0    2.4  2  Kinesin        Kinesin motor domain
    2.2e-24   86.1   0.0    5.4e-24   84.8   0.0    1.7  1  Microtub_bd    Microtubule binding
    0.00049   20.5   0.1     0.0016   18.9   0.1    1.9  1  GPS2_interact  G-protein pathway suppressor 2-interacting dom


Domain annotation for each model (and alignments):
>> Kinesin  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  389.7   0.0  1.5e-120    9e-117      31     333 .]      92     389 ..      12     389 .. 0.92
   2 !    2.6   0.1    0.0086        51     223     263 ..     803     842 ..     787     845 .. 0.77

  Alignments for each domain:
  == domain 1  score: 389.7 bits;  conditional E-value: 1.5e-120
                 EEEEECTTSCEEEEESEEEETTS-HHHHHHHHHHHHHHHHHTTSEEEEEEEESTTSSHHHHHTBCTTTSBSHHHHHHHHHHHHHHHCTTTHEEEEEEEE CS
     Kinesin  31 skkenkeeeekkfkFdkvfdeeatqeevyeetakplvesvleGynatifaYGqtgsGKTyTmegkeeeeeGiipraleelFesikkekeekekefsvkv 129
                 + + +   ++ +++Fd+vfde+a q++vye+ta+pl++++l+G+n+t+faYG+tg+GKT+T++g+ +e++Gi++ +l+elFe++++ k+e  k f+++v
  EPX73981.1  92 KGTFTGFGRDLRYAFDRVFDETAPQQSVYEQTARPLLDNILDGFNSTVFAYGATGCGKTHTITGT-NEDPGIVYLTLKELFERMDDLKDE--KVFNIHV 187
                 555566778999****************************************************9.999*****************9998..89***** PP

                 EEEEEETTEEEETTSTTTTSTSSEBEEEECTTSCCEEETTS--EEESSHHHHHHHHHHHHHHHTSTTSSCTSHHCCSEEEEEEEEEEEETTTTTCEEEE CS
     Kinesin 130 sylEiYneeiyDLLeskkskkkkklkiredskkgevyvkgltevevksaeevlellekgeknrkvaetklneeSSRSHavftitleqknlkeeteekvk 228
                 sylEiYne+i+DLL++++ +++k+l++red++++ ++v glt+ + +++eev+e++++g++nr+++ t++n +SSRSHav+++ + qk ++++ +e++ 
  EPX73981.1 188 SYLEIYNETIRDLLTEQPFSQSKPLTLREDADRR-ITVPGLTSLSPTTLEEVMEIVSRGNENRTMSPTAANVASSRSHAVLQVSVVQKPRTADINEDHA 285
                 ******************99999*********87.************************************************************99** PP

                 EEEEEEEEEEECCCHHHHSSTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTSTSCGGGSHHHHHTGGGHSSSSEEEEEEEE-TBGGGHHHHHHHHHHH CS
     Kinesin 229 isklnLvDLAGsErasktgaaegerlkEaaniNkSLlaLgrvisaLaekkkskhipYRdSkLTrlLqdsLgGnsktlmivtvspssenleetlstlkfa 327
                  ++l+++DLAGsEra++t++ +g rl E+aniN+SLlaLg++i+aL+++++++hipYRdSkLTrlL+ sLgGn+kt+miv++spss ++eet++tlk+a
  EPX73981.1 286 LATLSIIDLAGSERANATKS-RGGRLLEGANINRSLLALGNCINALCDPHRRAHIPYRDSKLTRLLKFSLGGNCKTVMIVCISPSSFHYEETHNTLKYA 383
                 *******************6.6888************************************************************************** PP

                 HHHCTT CS
     Kinesin 328 erakei 333
                 +rak+i
  EPX73981.1 384 NRAKNI 389
                 ****98 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.0086
                 TCEEEEEEEEEEEEEEECCCHHHHSSTCHHHHHHHHHHHHH CS
     Kinesin 223 teekvkisklnLvDLAGsErasktgaaegerlkEaaniNkS 263
                 ++e+v+  +l  +DL Gs + s ++  + ++++Ea + N S
  EPX73981.1 803 SNEEVSLPHLDTIDLDGSPNSSMSKR-SFDQREEAPQANAS 842
                 33558888999**********99997.56669999999988 PP

>> Microtub_bd  Microtubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.8   0.0     9e-28   5.4e-24      49     149 .]     101     201 ..      71     201 .. 0.92

  Alignments for each domain:
  == domain 1  score: 84.8 bits;  conditional E-value: 9e-28
                  TEEEE-SEEEECTTHCCCCCCCC.HHHHHHHHTT--EEEEEEES................ST-HCHHHHHHHHHHCCTSCCCCEEEEEEEEEEESS-E CS
  Microtub_bd  49 kkefsFdrvfeseseqeevfeei.sqlvqsaldgynvcifaygqTGsGKtyTmegeeeeagmipraveeifetiselkekgwkyeielqfveiynekv 145
                  + ++ Fdrvf++++ q++v+e++ + l++  ldg n ++fayg TG GKt+T++g++e++g +  +++e+fe + +l + ++ ++i+++++eiyne++
   EPX73981.1 101 DLRYAFDRVFDETAPQQSVYEQTaRPLLDNILDGFNSTVFAYGATGCGKTHTITGTNEDPGIVYLTLKELFERMDDL-KDEKVFNIHVSYLEIYNETI 197
                  568***********999998876268***************************************************.57899*************** PP

                  EETT CS
  Microtub_bd 146 qDlL 149
                  +DlL
   EPX73981.1 198 RDLL 201
                  ***8 PP

>> GPS2_interact  G-protein pathway suppressor 2-interacting domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.1   2.6e-07    0.0016       8      74 ..     366     435 ..     361     452 .. 0.74

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 2.6e-07
  GPS2_interact   8 iSptlps...eaeqeqelvpsrlsKdeLlqnidkvDREiakveqqiskLkkkqkeleeeaakpkeeekpv 74 
                    iSp + +   + +  +++   +  K e l+n+  vDR +++  + i  L+++  ele +  +p      +
     EPX73981.1 366 ISPSSFHyeeTHNTLKYANRAKNIKTEVLRNMISVDRHVSQYVKAIVDLRQQISELEDRLGNPSSSASIT 435
                    666655431122233445567889**********************************999996554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (887 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       781  (0.0435607); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.68u 0.26s 00:00:00.94 Elapsed: 00:00:00.40
# Mc/sec: 6728.73
//
Query:       EPX73982.1  [L=510]
Description: hypothetical protein SOCG_03198 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      5e-51  171.9   0.6      5e-51  171.9   0.6    2.3  2  CactinC_cactus  Cactus-binding C-terminus of cactin protein
      7e-33  114.0   0.9    1.5e-32  113.0   0.9    1.5  1  Cactin_mid      Conserved mid region of cactin
  ------ inclusion threshold ------
      0.034   14.5   0.0       0.11   12.9   0.0    1.9  1  SF3A2           Pre-mRNA-splicing factor SF3a complex subunit


Domain annotation for each model (and alignments):
>> CactinC_cactus  Cactus-binding C-terminus of cactin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.7       0.4   2.4e+03      32      48 ..     263     276 ..     255     341 .. 0.53
   2 !  171.9   0.6   8.4e-55     5e-51       3     125 .]     378     510 .]     376     510 .] 0.96

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.4
  CactinC_cactus  32 ednpPPkvvqgykFnif 48 
                     +d+pPPk    yk  i 
      EPX73982.1 263 NDTPPPKL---YKLPID 276
                     57778875...444444 PP

  == domain 2  score: 171.9 bits;  conditional E-value: 8.4e-55
  CactinC_cactus   3 dkyelrkPkyfnrvktgyeWnkynkthydednpPPkvvqgykFnifypdLidkekaptykiekk........teeeetvllrfkagkpYediafr 89 
                     d + l+kPky n+v++g+eWn+yn++hy+e +pPPk+vqgy+FnifypdLi ++++ptykie+          ++++++++rf ag+pY+diaf 
      EPX73982.1 378 DGIPLKKPKYLNKVMLGFEWNSYNQAHYNEAHPPPKAVQGYRFNIFYPDLIGTTRSPTYKIERGpkadresaMTQDNVCIIRFIAGAPYQDIAFC 472
                     667899********************************************************999999999878889****************** PP

  CactinC_cactus  90 ivdkewdlskk..rgfkssfergvlqlyfnfkkskyrr 125
                     ivdkewd+s+k  rgfkssf++gvl+l+f+fkk+++rr
      EPX73982.1 473 IVDKEWDYSAKreRGFKSSFDNGVLSLHFQFKKTHHRR 510
                     ********988779*********************998 PP

>> Cactin_mid  Conserved mid region of cactin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.0   0.9   2.5e-36   1.5e-32       9     197 ..      49     231 ..      41     232 .. 0.91

  Alignments for each domain:
  == domain 1  score: 113.0 bits;  conditional E-value: 2.5e-36
  Cactin_mid   9 eeweakEeeFhleqakkraeiRikegrakpiDlLaknlrlvdeeedeedde......adleieleePykileglsleeleeleediksyleleksekna 101
                 +  e+kE+ F  +q+ ++a iR+ke ra +  +L + l+l++++++++         +  ++++ +P  +++   +ee++ l e+i + ++l ++   +
  EPX73982.1  49 RVRESKEKAFLRQQKLLKAIIRVKEDRAGLLEKLLVSLSLLSQKNNQS--GiytgsmDLTNLDMFDPIFTIKIAPVEEINILIENIPEIMTLTDDTISS 145
                 55589***********************************88766554..356899888889******************************99999** PP

  Cactin_mid 102 efWkallvvckdeleklkkkeeekeaaeeaeesgihasveadikkilkgksleeLeelekqikekLesgeavDveYWesllkklkvykAkarLkdi 197
                 +fWk++  ++   le           ++ ++ s++ ++v++di++il++k++++L  le++++ kL+sge++D++YWe llk++++ykA a+L+d+
  EPX73982.1 146 KFWKSVYELAVSFLEL----------DQYGNASRSLKTVAKDIQSILAPKNYDQLVVLETKVQGKLQSGEPIDTDYWEDLLKSIQAYKAMAYLRDL 231
                 **************99..........234566899**********************************************************986 PP

>> SF3A2  Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   1.8e-05      0.11      15      81 ..     412     481 ..     401     496 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.8e-05
       SF3A2  15 eteqvgllvevkypeike.evkPlhrimsaleqkleekpdkkvqyLl..iaaePYetiafkipskeidks 81 
                  +  +g  +++ yp+    + +P ++i      ++e++  ++   ++  ia  PY+ iaf i +ke d s
  EPX73982.1 412 PKAVQGYRFNIFYPDLIGtTRSPTYKIERGPKADRESAMTQDNVCIIrfIAGAPYQDIAFCIVDKEWDYS 481
                 56678999999**987664678*****9887777776666666655444*************99997766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (510 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       900  (0.050198); expected 358.6 (0.02)
Passed bias filter:                      485  (0.0270511); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.38
# Mc/sec: 3987.80
//
Query:       EPX73983.1  [L=57]
Description: hypothetical protein SOCG_03199 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-14   54.2   1.7    1.5e-14   54.1   1.7    1.0  1  COX7a     Cytochrome c oxidase subunit VII


Domain annotation for each model (and alignments):
>> COX7a  Cytochrome c oxidase subunit VII
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.1   1.7   8.2e-19   1.5e-14       2      52 ..       4      53 ..       3      54 .. 0.94

  Alignments for each domain:
  == domain 1  score: 54.1 bits;  conditional E-value: 8.2e-19
       COX7a  2 rVpelQrlfQssdkkplwlrgprsklylypyyalfavgllgslygmyrmvl 52
                 ++++Qr++Qs  + p++l++p s +++ypyya++++  l+s+y ++++ +
  EPX73983.1  4 LIVQRQRFLQS-IHRPTYLQRPGSGFLVYPYYAAMGGISLLSVYFTGKLLM 53
                599********.777********************************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       182  (0.0101512); expected 358.6 (0.02)
Passed bias filter:                      157  (0.00875676); expected 358.6 (0.02)
Passed Vit filter:                         9  (0.00050198); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.34s 00:00:00.83 Elapsed: 00:00:00.54
# Mc/sec: 317.90
//
Query:       EPX73984.1  [L=229]
Description: transcriptional activator [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.14   12.7   0.2        1.6    9.3   0.2    2.2  2  DUF668    Protein of unknown function (DUF668)


Domain annotation for each model (and alignments):
>> DUF668  Protein of unknown function (DUF668)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.04   7.2e+02      75      85 ..      17      27 ..       3      30 .. 0.82
   2 ?    9.3   0.2   8.7e-05       1.6       9      58 ..     110     173 ..     107     184 .. 0.88

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.04
      DUF668 75 kiLewLvPlAh 85
                ++L wL+P+++
  EPX73984.1 17 SVLPWLSPISE 27
                689*****997 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 8.7e-05
      DUF668   9 lhYAnvivlieklvars..............ssvpesardeLYqmLpasvrsalrakLrslekk 58 
                 l YA++i +  kl +++              +s ++++r++  +     ++salr++Lr+ e +
  EPX73984.1 110 LGYAKLIHQHRKLSNSNqrkqdrglmamvlsRSEKQEERENHSSDARDAIKSALRKRLRRREGR 173
                 77********9998888899999999999999999999***9999*************987655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       983  (0.0548274); expected 358.6 (0.02)
Passed bias filter:                      561  (0.0312901); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.36s 00:00:00.96 Elapsed: 00:00:00.55
# Mc/sec: 1263.04
//
Query:       EPX73985.1  [L=308]
Description: ribosomal protein subunit L35 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-05   25.0   0.0    3.3e-05   24.2   0.0    1.3  1  PBP       Phosphatidylethanolamine-binding protein


Domain annotation for each model (and alignments):
>> PBP  Phosphatidylethanolamine-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.0   1.8e-09   3.3e-05       5     102 ..     153     245 ..     141     267 .. 0.74

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 1.8e-09
                 GGCSBGGS.-EEEEES--TTSSEEEEEEEETTSCCTCT.T...EEEEEEEEEETTSSEE-TTCEE-B-TTSS..CCCCS---B--STTS..EEEEEEEE CS
         PBP   5 kyegents.PplswsdvpegtksyalvviDpDapkvse.t...flHwvvtnipasvtslpegavqgknslge..esesgYlgpcPpkgdgkHrYvflly 96 
                 +   + +s P l++  +  ++ sy++   D+D+p+ ++ +    + w++ n+p     +++       s+ +  ++ ++Y +p    g+ kHr v l+ 
  EPX73985.1 153 E---QTCSePLLQVLPFNTEEHSYTIATLDLDVPNYQTnEfetSCLWLASNVP-----IKASD----RSFIRpsNCLIPYSPPILHRGEDKHRIVTLVL 239
                 4...5566799999999999*************9777752567**********.....33322....22222323446***********99*******9 PP

                 EESSSG CS
         PBP  97 aldvea 102
                 + + ++
  EPX73985.1 240 QQEDPS 245
                 755444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (308 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       500  (0.0278878); expected 358.6 (0.02)
Passed bias filter:                      451  (0.0251548); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 2116.81
//
Query:       EPX73986.1  [L=344]
Description: transcription factor Atf21 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.7e-08   32.2   7.1    1.8e-07   31.2   7.1    1.5  1  bZIP_1    bZIP transcription factor
    0.00019   21.4   7.4    0.00074   19.5   7.4    1.9  1  bZIP_2    Basic region leucine zipper
  ------ inclusion threshold ------
       0.13   12.8   4.5       0.28   11.7   4.5    1.5  1  bZIP_Maf  bZIP Maf transcription factor


Domain annotation for each model (and alignments):
>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2   7.1   2.9e-11   1.8e-07       5      63 ..     257     315 ..     254     316 .. 0.96

  Alignments for each domain:
  == domain 1  score: 31.2 bits;  conditional E-value: 2.9e-11
                 XXXXXX--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 KrekrkqkNReaArrsRqRKqaeieeLerrvkaLekeNksLkseleelkkevekLkskv 63 
                 Kr++ +++NR+aA+++Rq+K+  ++ Le+ +    ++ k+L+s + +l++ev  Lk+++
  EPX73986.1 257 KRKRFLERNRIAASKCRQKKKLWTQDLENSARIACEQSKALRSLVAQLREEVLCLKNQL 315
                 99999***********************************************9999875 PP

>> bZIP_2  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   7.4   1.2e-07   0.00074      10      54 .]     262     307 ..     255     315 .. 0.69

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 1.2e-07
                 X.XXXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_2  10 r.kNreAarrsRekkkakeeeleervkeLeeeNaqLrqkveqLeke 54 
                   +Nr+Aa ++R+kkk+ +++le+ +    e+  +Lr  v+qL+ e
  EPX73986.1 262 LeRNRIAASKCRQKKKLWTQDLENSARIACEQSKALRSLVAQLREE 307
                 359********************98755444444444444444433 PP

>> bZIP_Maf  bZIP Maf transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   4.5   4.7e-05      0.28      30      80 ..     257     307 ..     256     320 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 4.7e-05
    bZIP_Maf  30 KqrRRrlKNrgyakscrkrrlqqkeelekekeeleeelerlqqelsrlrqe 80 
                 K++R   +Nr +a +cr+++   +++le++ + + e+ ++l+  ++ lr+e
  EPX73986.1 257 KRKRFLERNRIAASKCRQKKKLWTQDLENSARIACEQSKALRSLVAQLREE 307
                 7888899*************9999999988888888888877777777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (344 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       493  (0.0274974); expected 358.6 (0.02)
Passed bias filter:                      300  (0.0167327); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 2385.70
//
Query:       EPX73987.1  [L=405]
Description: mRNA guanylyltransferase Ceg1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-59  201.6   0.0    1.4e-59  201.2   0.0    1.2  1  mRNA_cap_enzyme  mRNA capping enzyme, catalytic domain
    8.8e-36  122.8   0.3    1.5e-35  122.1   0.3    1.4  1  mRNA_cap_C       mRNA capping enzyme, C-terminal domain
    1.3e-07   31.5   0.0    0.00013   21.7   0.0    2.6  1  DNA_ligase_A_M   ATP dependent DNA ligase domain
      2e-06   28.2   0.0    3.5e-06   27.4   0.0    1.4  1  RNA_ligase       RNA ligase


Domain annotation for each model (and alignments):
>> mRNA_cap_enzyme  mRNA capping enzyme, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  201.2   0.0   3.2e-63   1.4e-59       1     195 []      45     242 ..      45     242 .. 0.98

  Alignments for each domain:
  == domain 1  score: 201.2 bits;  conditional E-value: 3.2e-63
                      EEEE--TTHHHHHHHS-EEEEEEESSEEEEEEEEECT.....EEEEEEETTS-EEEESSST-BTTSSSSTCTSBGGSEEEEEEEEEEECTTCEE CS
  mRNA_cap_enzyme   1 qPvSlerenlekLkqkkYvvseKaDGiRylmllteee.....egvylidRenevyrvenlrfprekdkeklekvldetllDgElvidkveekkk 89 
                      qPvS+ +++l+ Lk+k+Y+v+eK+DG+R+lm++t+++     ++vylidR+ ++y+++nl +p  +d ++ + +++et+lDgEl++++ ++ kk
       EPX73987.1  45 QPVSFAHKHLQTLKEKDYYVCEKSDGTRFLMYMTKDPsrpdkPTVYLIDRNPNYYHISNLIYPIPTDISG-KAMHTETVLDGELILERFPDGKK 137
                      8***********************************99999989**********************9888.99********************* PP

                      EEEEEEEEEEEETTEEGTTSBHHHHHHHHHHHTHHHHHHHHHTTCCCCTTSSSEEEE--EEETTHHHHHHHHCCCCCTTSTEEEEEEEESSSB- CS
  mRNA_cap_enzyme  90 elryliyDivaingvtvaeeplskRleilkkelikprneekktglletdkepfsvrlKefilleavaklleekfikklshesDGLIfqpvkepy 183
                      +l++l++D++a++g+ ++++pl+kR+ ++  ++i p  + +++   + +++pf +  K+++ ++ ++  l++++i++l+h +DGLIf++v++py
       EPX73987.1 138 QLKFLVFDCLACDGKLYMNRPLDKRIGVFMVNIIIPLRQFMQKFPKSGETFPFLTEGKKMERSYGIEM-LFRDIIPSLHHGNDGLIFTCVDTPY 230
                      *****************************************988899999*****************9.99*********************** PP

                      -SEEEEEEEEE- CS
  mRNA_cap_enzyme 184 vagrdsdllKwK 195
                      ++g+d++llKwK
       EPX73987.1 231 ITGTDHNLLKWK 242
                      ***********9 PP

>> mRNA_cap_C  mRNA capping enzyme, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.1   0.3   3.3e-39   1.5e-35       2     108 .]     247     358 ..     246     358 .. 0.97

  Alignments for each domain:
  == domain 1  score: 122.1 bits;  conditional E-value: 3.3e-39
                 SEEEEEEEE.......SSS--TTS--EEEEEEEES.TEEEEEEEB---HH...HHHHHHHT-S--TTEEEEEEE-TTS-EEEEEE-TT-SS--BHHHHH CS
  mRNA_cap_C   2 NtvDFklel.......ekyedydakpkfellvleg.ekyekfaelylseeekeeweelkslneeldgkIvEcsldeekrWkllriRdDKsepNhisvve 92 
                 Nt DF+l+l       + + ++da+p+f+l v++g ++y+ fa++y++ee   ewe+lks n +l+++I+Ecsldee+rW++lr+RdDKse+Nhis+ve
  EPX73987.1 247 NTLDFMLRLefteadeQGNVNFDAMPQFQLGVYHGrNSYSYFADMYVNEE---EWEKLKSYNTPLQDRIIECSLDEENRWRFLRFRDDKSEANHISTVE 342
                 9**************98889***************889**********99...**********************999********************* PP

                 HHHHHHHTS--HHHHH CS
  mRNA_cap_C  93 kvleSIednvteeeLl 108
                 +vl+SIed+vtee+Ll
  EPX73987.1 343 SVLKSIEDAVTEEDLL 358
                 **************96 PP

>> DNA_ligase_A_M  ATP dependent DNA ligase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   2.9e-08   0.00013      73     204 .]     120     242 ..      44     242 .. 0.63

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 2.9e-08
                     EEEEEEEEEEEETTTTCBEHHHHHCHHH.HCHCCTHHHHHHSEEEEEEEEEEEETTEEHTTSCHHHHHHHHHHHB............--BTTTEE CS
  DNA_ligase_A_M  73 svilDGElvavdketgeilpfqklasrk.kkkkkveeklkeaelclfvFDiLyldgesltdeplkeRrklLeeil............kesedrve 154
                     + +lDGEl++               +r+ +          +++l ++vFD+L++dg+ ++++pl++R  +   ++            k+ e+   
      EPX73987.1 120 ETVLDGELIL---------------ERFpDG---------KKQLKFLVFDCLACDGKLYMNRPLDKRIGVFMVNIiiplrqfmqkfpKSGETFPF 190
                     4444444444...............333111.........35789**********************9876655559999999999766666666 PP

                     E--EEEESSHHHHHHHHHHHH...HTTECEEEEEETT-CC-TTCEEEEEEEEE CS
  DNA_ligase_A_M 155 laeslevkdveeleelleeai...seglEGlvvKnpdskYepgkrsknwlKvK 204
                     l e ++++ +  +e l++  i   ++g +Gl+   +d +Y  g   +n+lK K
      EPX73987.1 191 LTEGKKMERSYGIEMLFRDIIpslHHGNDGLIFTCVDTPYITGTD-HNLLKWK 242
                     77788888888999999886532278999**************99.9999988 PP

>> RNA_ligase  RNA ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   0.0   7.9e-10   3.5e-06       2     161 .]      61     242 ..      60     242 .. 0.79

  Alignments for each domain:
  == domain 1  score: 27.4 bits;  conditional E-value: 7.9e-10
                 EEEEEEE-SSEEEEEEEETT........EEEEETTCEBCTTTHHHHHHTHHHHHHHHHHHHH......ECCEEEEEEEES.SS..TTSS.EEEEEEEEE CS
  RNA_ligase   2 evvvtEKlDGtnfriylvke........vgvasRsqilpfgeekfkefkrwaaalrkklkekla....neelilyGElighsikygglpkefyvFdifd 88 
                  ++v+EK DGt+f +y++k+        v+++ R+  +           +    l ++++ +++    + e +l GEli +  + g+ + +f+vFd+++
  EPX73987.1  61 DYYVCEKSDGTRFLMYMTKDpsrpdkptVYLIDRNPNY-----------YHISNLIYPIPTDISgkamHTETVLDGELILERFPDGKKQLKFLVFDCLA 148
                 689***************88877778888888888666...........5566788899999999999889*********66654444449*******9 PP

                 EECTT..............BECE--HHHH.HHHHHCCT.B..EEEEE.SS.HHHHHCCC......HHHHTC--EEEEEESSSSBE.TTEBSEEEEE CS
  RNA_ligase  89 irdke..............eqrylspdev.ealakglg.tvpvlyegkfl.aaeellel.....llskgnkrEGlVikpeselyk.nkgraifKvk 161
                  ++k                +   + +++ +++ k+ g t p+l+egk+   +  ++ l     + s  +   Gl++ ++++ y   ++++++K+k
  EPX73987.1 149 CDGKLymnrpldkrigvfmVNIIIPLRQFmQKFPKS-GeTFPFLTEGKKMeRSYGIEMLfrdiiP-SLHHGNDGLIFTCVDTPYItGTDHNLLKWK 242
                 984447888899999999988899999998999884.56******99998544444444775542.5556788*******9999988889999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (405 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       589  (0.0328518); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 2815.56
//
Query:       EPX73988.1  [L=234]
Description: 60S ribosomal protein L8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.3e-36  123.1   4.4    1.4e-35  122.3   3.7    1.6  2  Ribosomal_L2_C  Ribosomal Proteins L2, C-terminal domain
    1.1e-15   57.3   0.1    2.6e-15   56.1   0.1    1.6  1  Ribosomal_L2    Ribosomal Proteins L2, RNA binding domain


Domain annotation for each model (and alignments):
>> Ribosomal_L2_C  Ribosomal Proteins L2, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.46   4.1e+03      16      34 ..      43      61 ..      39      63 .. 0.83
   2 !  122.3   3.7   1.5e-39   1.4e-35      11     119 ..      87     202 ..      83     210 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.46
                    -BBSE-SSTTS--SSS-SS CS
  Ribosomal_L2_C 16 ivhnielkpgkggklarsa 34
                    +v  i   pg+g+ lar a
      EPX73988.1 43 VVQKIIHDPGRGAPLARVA 61
                    5778888999999999987 PP

  == domain 2  score: 122.3 bits;  conditional E-value: 1.5e-39
                     S-TTB-BBSE-SSTTS--SSS-SSSB-EEBB-B...SSEEEEEETTS-EEEEETTSBEBES-BS-TTCTT----STTHHHHT.....TBS----S CS
  Ribosomal_L2_C  11 ipeGtivhnielkpgkggklarsaGtyaqvvak..egkkvtvklpSgevrkvssecrAtiGvvsngehkekklgkAgrkrwl.....grrpkvrG 98 
                     i  Gti  n+e+k g++g l rs+G+y+ +v++  ++ k++vklpSg++++v+s++r ++G++++g++ +k+l+kAgr++++     +++pk+rG
      EPX73988.1  87 IYCGTIASNVEEKSGDRGALGRSSGNYVIIVGHdiDTGKTRVKLPSGSKKVVPSAARGVVGIIAGGGRVDKPLLKAGRAYHKykvkrNCWPKTRG 181
                     6679*****************************5549********************************************************** PP

                     SSS-TTTSSS--SSSS--SSS CS
  Ribosomal_L2_C  99 vamnpvdHphGGGeGktksrk 119
                     vamnpvdHphGGG+ ++++++
      EPX73988.1 182 VAMNPVDHPHGGGNHQHVGHS 202
                     **************6655543 PP

>> Ribosomal_L2  Ribosomal Proteins L2, RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.1   0.1   2.9e-19   2.6e-15       6      77 .]      15      89 ..      10      89 .. 0.89

  Alignments for each domain:
  == domain 1  score: 56.1 bits;  conditional E-value: 2.9e-19
                  --BSSTT--------EE-B--S---SS--EEEEEEE--TT-SS-EEEEEETT.....TEEE..EEE--SS--SS-EE-- CS
  Ribosomal_L2  6 gritvrhrggGhkkkyrlidfkrnkekvkgkVveieyDpgRsApiAlvkyed.....gekr..yiiapeglkvGdtvvs 77
                  +++++r r+g   ++ r +df++++++++g+V++i++DpgR Ap+A+v++ +            ++a+eg+ +G+++++
    EPX73988.1 15 FQAHTRLRKG--AAQLRTLDFAERHGYIRGVVQKIIHDPGRGAPLARVAFRNpyhyrT--DveTFVATEGMYTGQFIYC 89
                  899*******..9***************************************865443..055899***********85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (234 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       240  (0.0133861); expected 358.6 (0.02)
Passed bias filter:                      205  (0.011434); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 1628.12
//
Query:       EPX73989.1  [L=1148]
Description: sterol binding ankyrin repeat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   1.2e-128  429.1   0.1   1.2e-128  429.1   0.1    2.0  2  Oxysterol_BP  Oxysterol-binding protein
    1.9e-18   66.3   6.6    2.1e-09   37.4   0.1    3.2  3  Ank_5         Ankyrin repeats (many copies)
    8.1e-17   61.6   0.2    1.1e-15   58.0   0.0    2.7  2  PH            PH domain
    3.6e-16   59.5   2.9    3.5e-08   33.9   1.0    2.6  2  Ank_2         Ankyrin repeats (3 copies)
    3.9e-12   46.4   4.2    3.8e-05   24.1   0.0    3.3  4  Ank_4         Ankyrin repeats (many copies)
    2.2e-10   39.9   6.7    0.00047   20.4   0.0    4.5  6  Ank_3         Ankyrin repeat
    5.6e-07   29.8   0.0    1.7e-06   28.2   0.0    1.8  1  PH_8          Pleckstrin homology domain
      8e-07   29.2   4.1     0.0018   18.6   0.7    3.3  3  Ank           Ankyrin repeat
     0.0032   17.9   1.7     0.0032   17.9   1.7    3.3  3  PH_11         Pleckstrin homology domain
  ------ inclusion threshold ------
        1.6    9.0  13.9        6.8    6.9  13.9    2.0  1  zf-C4H2       Zinc finger-containing protein


Domain annotation for each model (and alignments):
>> Oxysterol_BP  Oxysterol-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.5      0.75   1.3e+03     223     252 ..     487     516 ..     465     573 .. 0.59
   2 !  429.1   0.1  6.8e-132  1.2e-128       1     372 [.     775    1123 ..     775    1124 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.75
                   EEEEEETTTEEEEEETTSTTS--EEEEETT CS
  Oxysterol_BP 223 yeisGkwdeelyikkkktekkeeeedasek 252
                    +i+  w e+l++  +++++ ee+ + se+
    EPX73989.1 487 TRINALWAENLKTVVEEQDQIEERYHRSEN 516
                   444444444444422222222222222221 PP

  == domain 2  score: 429.1 bits;  conditional E-value: 6.8e-132
                    HHHCCHTTSTT-BCCCS---GGGEEEEEHHHHHHHCCTTCHHHHHHHC.SSHHHHHHHHHHHHHHCCCGCTSTSSSEEE---TT-EEEEEETTCE CS
  Oxysterol_BP    1 slwsilkkciGkDLskislPvffneplSlLqrlaedleyselLdkaakeddsleRlayVaaFalSsyastikrrlkKPFNPlLGEtfelvredkg 95  
                    slwsilk +iGkD++k++lPv+fnep+SlLqr+aed+ey++lL+ a++++d+  R++yVaaFa S+yasti +r++KPFNPlLGEt+e++r+dkg
    EPX73989.1  775 SLWSILKGMIGKDMTKMALPVSFNEPTSLLQRVAEDMEYTDLLEIASQQKDPAWRVLYVAAFAASEYASTI-NRVAKPFNPLLGETYEFCRPDKG 868 
                    79*********************************************************************.8********************** PP

                    EEEEEEEEETTTTEEEEEEEECTEEEEEEEEEEEEE-SSEEEEEE-SEEEEEE..EEESEEEEEEE--EEEEE-TTTTS-EEEEEEEEEEEETTT CS
  Oxysterol_BP   96 frfiaEQVsHhPpvsAfhaesegweldgeikvkskflgkslevkpeGtahlel..lkksgehYtwtkpttivhniivgklwvelsgeveitnhst 188 
                    +rf+ EQVsHhPp+ A +aes +w+++ge++vkskf+gks++++p Gt++lel     + e +tw+k+t++v +ii g+++++++g++ ++nhs+
    EPX73989.1  869 YRFLIEQVSHHPPIGAACAESLNWKYYGESSVKSKFYGKSFDISPLGTWYLELrnPSGNMELFTWKKITSSVVGIISGNPTIDNYGQMLVQNHSS 963 
                    *****************************************************53244889********************************** PP

                    --EEEEEEE---SSS---SSEEEEEEEETTS-EEEEEEEETTTEEEEEETTSTTS--EEEEETT-BSXXGCGSSTTBCCCCCCH-----...GGG CS
  Oxysterol_BP  189 gdkakleFkkkglfsskksnkvegkvkdkkkevlyeisGkwdeelyikkkktekkeeeedasekskvkekeeqeefeseklWkasplpkaeeyyg 283 
                      ++ l+Fk++g+  + ++++v+g +++ ++++ y+++G+w++++++ ++                         ++++++W+++++p   ++++
    EPX73989.1  964 HVNCLLDFKPRGWR-GTNAYEVKGSIQSTSDTPEYTVNGHWNDKIFAYNAG------------------------SNKTMIWQNHERP--PRPFN 1031
                    ************88.599*****************************3333........................34689****8885..47*** PP

                    --HHHHCCT---.TT.GGS-TTBGGG-HHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHCCTT..----SSEEEEETTTTSSCEEEC-S-HH CS
  Oxysterol_BP  284 ftkfavtlNeieeke.kslaptDsRlRpDqraleegdideAeeeKkrlEekQRerrkereekk..ewkpkwFekekdpdtgeevwkykgeyw 372 
                    +t+fa++lN ++++  ++l+ptD+RlRpDqra+e+g++d A++eK+r+EekQR+rr++r++ +  ewkpkwF+ +k+p tge++wk++geyw
    EPX73989.1 1032 LTPFAISLNALSDELkPWLPPTDTRLRPDQRAMEDGQYDFAADEKNRVEEKQRDRRRMRDQGQmeEWKPKWFSLQKHPITGEDYWKFNGEYW 1123
                    ************9778*******************************************5555568************************** PP

>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4   0.1    0.0067        12      10      47 ..      54      92 ..      49      93 .. 0.83
   2 !   29.8   1.3     3e-10   5.5e-07       6      56 .]      84     135 ..      82     135 .. 0.97
   3 !   37.4   0.1   1.2e-12   2.1e-09       8      55 ..     190     233 ..     181     233 .. 0.88

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0067
       Ank_5 10 nrldgggntpLhvAakygaadvvrlLl.argadlnltds 47
                n+++++ + +L +++ + +a++v+ +l  + +dln++d+
  EPX73989.1 54 NHSREDCTFALFLSIQCANASMVKHILsVFDVDLNAYDK 92
                44444445899999**********************997 PP

  == domain 2  score: 29.8 bits;  conditional E-value: 3e-10
       Ank_5   6 padvnrldgggntpLhvAakygaadvvrlLl.argadlnltdsrGltaldlA 56 
                 ++d+n++d++ ntpLh+Aa +g++d+v+ Ll  +  ++nl ++++l a+++A
  EPX73989.1  84 DVDLNAYDKNHNTPLHLAAMAGRQDIVETLLlHPDINYNLLNGNNLKAWQVA 135
                 489**********************************************998 PP

  == domain 3  score: 37.4 bits;  conditional E-value: 1.2e-12
       Ank_5   8 dvnrldgggntpLhvAakygaadvvrlLlargadlnltdsrGltaldl 55 
                 dv++    g+t Lh+Aak++ +++vr+Ll+++ad+  +d+ G++++d+
  EPX73989.1 190 DVDT----GQTYLHIAAKARDLELVRWLLNNNADPYRRDKFGKLPVDY 233
                 4444....55*************************************8 PP

>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.0   0.0   6.2e-19   1.1e-15       3     104 ..     261     352 ..     259     353 .. 0.94
   2 ?    0.0   0.1      0.68   1.2e+03      13      28 ..    1093    1108 ..    1080    1115 .. 0.74

  Alignments for each domain:
  == domain 1  score: 58.0 bits;  conditional E-value: 6.2e-19
                 EEEEEEEETSSSSCSEEEEEEEEETTEEEEESSTTCTTESSEEEEEESTTEEEEEEECTTSSSSTSEEEEEESTSSSTEEEEEEESSHHHHHHHHHHHH CS
          PH   3 keGwLlkkgsgkkkswkkrwfvLkdsellyykndksekdkepkgsislsncevvevvatedpkrkfcfelriverngsrtyllqasseeerkeWikaiq 101
                 ++G+L+k+++ k+ ++k rwf L+d++l+yykn+ ++ ++  +gsi+ls ++ v      dpk++ +f+++    +gs +y  +a+s+ e+++Wi ai+
  EPX73989.1 261 ISGYLKKWTNYKS-GYKLRWFSLHDGVLSYYKNQ-DDASSACRGSINLSLARLVY-----DPKQPTVFQVIG---RGSVRYSVKANSPVEAHRWIDAIS 349
                 79*********99.********************.*******************8.....9*********44...456********************9 PP

                 HHH CS
          PH 102 sai 104
                  ai
  EPX73989.1 350 FAI 352
                 887 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.68
                  SSSCSEEEEEEEEETT CS
          PH   13 gkkkswkkrwfvLkds 28  
                  g+   wk +wf L++ 
  EPX73989.1 1093 GQMEEWKPKWFSLQKH 1108
                  23339******99875 PP

>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   1.0     2e-11   3.5e-08       1      80 [.      36     122 ..      36     125 .. 0.79
   2 !   24.6   0.0   1.6e-08   2.8e-05      33      83 .]     162     224 ..     153     229 .. 0.77

  Alignments for each domain:
  == domain 1  score: 33.9 bits;  conditional E-value: 2e-11
       Ank_2   1 LhlAakngnlelvklLl.egadpnkngktaLhyAakngnleivklLleh.......adndgrtpLhyAarsghleivklLlek.gadin 80 
                 L +A +ng+ + v+ Ll ++++ + +  +aL+++++  n  +vk +l+         d++ +tpLh+Aa  g+++iv+ Ll + ++++n
  EPX73989.1  36 LLQAFQNGDVNEVDALLqNHSR-E-DCTFALFLSIQCANASMVKHILSVfdvdlnaYDKNHNTPLHLAAMAGRQDIVETLLLHpDINYN 122
                 5688999999999999954433.2.457********9999*******944656445559999****************99955355555 PP

  == domain 2  score: 24.6 bits;  conditional E-value: 1.6e-08
       Ank_2  33 AakngnleivklLleh........ad....ndgrtpLhyAarsghleivklLlekgadinlkd 83 
                 A ++ n +++ +L+ h        ++    ++g+t Lh+Aa+   le+v++Ll+++ad+ ++d
  EPX73989.1 162 AFQERNFDTLDYLMRHneynsaidLNdidvDTGQTYLHIAAKARDLELVRWLLNNNADPYRRD 224
                 445556688889998767677756224558889999999998888999999998889988776 PP

>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   9.4e-06     0.017      23      55 .]      83     114 ..      68     114 .. 0.86
   2 !   14.1   0.0     3e-05     0.053       1      33 [.      94     126 ..      94     129 .. 0.79
   3 !   18.3   0.1   1.4e-06    0.0025       7      55 .]     161     214 ..     159     214 .. 0.90
   4 !   24.1   0.0   2.1e-08   3.8e-05       3      40 ..     196     232 ..     194     233 .. 0.93

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 9.4e-06
       Ank_4  23 kgadinaqdnrsGetalhiAakrgnveilklLl 55 
                 +++d+na  +++++t+lh Aa+ g+ +i++ Ll
  EPX73989.1  83 FDVDLNAY-DKNHNTPLHLAAMAGRQDIVETLL 114
                 6899***9.****************99999887 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 3e-05
       Ank_4   1 eltaLhyaaisgrlelvrlLlek.gadinaqdnr 33 
                 ++t+Lh aa++gr ++v+ Ll + +++ n   n+
  EPX73989.1  94 HNTPLHLAAMAGRQDIVETLLLHpDINYNLL-NG 126
                 689******************6655555554.54 PP

  == domain 3  score: 18.3 bits;  conditional E-value: 1.4e-06
       Ank_4   7 yaaisgrlelvrlLl.....ekgadinaqdnrsGetalhiAakrgnveilklLl 55 
                 +a+++ +++++++L      ++ +d+n  d + G+t lhiAak  ++e +++Ll
  EPX73989.1 161 HAFQERNFDTLDYLMrhneyNSAIDLNDIDVDTGQTYLHIAAKARDLELVRWLL 214
                 577788999******99976668*****98899********************8 PP

  == domain 4  score: 24.1 bits;  conditional E-value: 2.1e-08
       Ank_4   3 taLhyaaisgrlelvrlLlekgadinaqdnrsGetalh 40 
                 t Lh aa++ +lelvr+Ll+++ad++++ ++ G  +++
  EPX73989.1 196 TYLHIAAKARDLELVRWLLNNNADPYRR-DKFGKLPVD 232
                 679*************************.***998886 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0        10   1.8e+04      13      25 ..      43      55 ..      38      56 .. 0.70
   2 ?    1.8   0.1      0.29   5.2e+02       5      31 .]      63      89 ..      63      89 .. 0.90
   3 !   18.0   0.2   1.5e-06    0.0027       1      30 [.      93     122 ..      93     123 .. 0.93
   4 ?   -3.8   0.0        10   1.8e+04      14      25 ..     167     178 ..     166     181 .. 0.74
   5 !   20.4   0.0   2.6e-07   0.00047       2      30 ..     194     221 ..     193     222 .. 0.95
   6 ?   -2.6   0.0       8.2   1.5e+04      12      30 ..     945     966 ..     943     967 .. 0.69

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 10
       Ank_3 13 gnleivkfLlenk 25
                g+++ v++Ll+n+
  EPX73989.1 43 GDVNEVDALLQNH 55
                5553499999965 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.29
       Ank_3  5 pLhlAarsgnleivkfLlenkgadvna 31
                +L+l + ++n ++vk +l  + +d+na
  EPX73989.1 63 ALFLSIQCANASMVKHILSVFDVDLNA 89
                578888999999*************96 PP

  == domain 3  score: 18.0 bits;  conditional E-value: 1.5e-06
       Ank_3   1 nGetpLhlAarsgnleivkfLlenkgadvn 30 
                 n +tpLhlAa++g+ +iv+ Ll ++ ++ n
  EPX73989.1  93 NHNTPLHLAAMAGRQDIVETLLLHPDINYN 122
                 679********************9999887 PP

  == domain 4  score: -3.8 bits;  conditional E-value: 10
       Ank_3  14 nleivkfLlenk 25 
                 n++ +++L +++
  EPX73989.1 167 NFDTLDYLMRHN 178
                 567799999954 PP

  == domain 5  score: 20.4 bits;  conditional E-value: 2.6e-07
       Ank_3   2 GetpLhlAarsgnleivkfLlenkgadvn 30 
                 G+t Lh+Aa++ +le+v++Ll+ ++ad++
  EPX73989.1 194 GQTYLHIAAKARDLELVRWLLN-NNADPY 221
                 9*********************.8**996 PP

  == domain 6  score: -2.6 bits;  conditional E-value: 8.2
       Ank_3  12 sgnlei...vkfLlenkgadvn 30 
                 sgn++i    ++L++n+   vn
  EPX73989.1 945 SGNPTIdnyGQMLVQNHSSHVN 966
                 5666533338999999988888 PP

>> PH_8  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.2   0.0   9.4e-10   1.7e-06       4      86 ..     265     349 ..     262     351 .. 0.83

  Alignments for each domain:
  == domain 1  score: 28.2 bits;  conditional E-value: 9.4e-10
        PH_8   4 lkkrrkklqgyakRfFvLdlksstlsYyrddnss..alrgkiplslaiisaneekrei..iidsGaevWeLkasnekdfqeWveale 86 
                 lkk    + gy+ R+F+L  + + lsYy++++++  a rg+i lsla +  + ++  +  +i  G   +++ka++  ++++W++a++
  EPX73989.1 265 LKKWTNYKSGYKLRWFSL--HDGVLSYYKNQDDAssACRGSINLSLARLVYDPKQPTVfqVIGRGSVRYSVKANSPVEAHRWIDAIS 349
                 678888899*********..9*******988765559**********666666665542247778888****************985 PP

>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1       2.4   4.2e+03       6      31 ..      64      91 ..      63      92 .. 0.74
   2 !   18.6   0.7     1e-06    0.0018       3      28 ..      95     120 ..      93     125 .. 0.81
   3 !   10.1   0.0   0.00052      0.93       2      31 ..     194     224 ..     193     225 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 2.4
                HHHHHHHTTHHHHHHHH..TTTSTTCBT CS
         Ank  6 LHlAatngkkriiklLL..hGAnlnald 31
                L l +++++++++k +L     +lna d
  EPX73989.1 64 LFLSIQCANASMVKHILsvFDVDLNAYD 91
                6676788899999999943358999977 PP

  == domain 2  score: 18.6 bits;  conditional E-value: 1e-06
                 BBHHHHHHHHTTHHHHHHHH.TTTSTT CS
         Ank   3 nTPLHlAatngkkriiklLL.hGAnln 28 
                 nTPLHlAa+ g  +i++ LL h  ++n
  EPX73989.1  95 NTPLHLAAMAGRQDIVETLLlHP-DIN 120
                 9*******9999*****776685.555 PP

  == domain 3  score: 10.1 bits;  conditional E-value: 0.00052
                 SBBHHHHHHHHTTHHHHHHHH.TTTSTTCBT CS
         Ank   2 GnTPLHlAatngkkriiklLL.hGAnlnald 31 
                 G T LH+Aa   +++ +++LL + A++  +d
  EPX73989.1 194 GQTYLHIAAKARDLELVRWLLnNNADPYRRD 224
                 8899*****888899******778**98887 PP

>> PH_11  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1       2.4   4.3e+03      64      87 ..      13      36 ..       2      54 .. 0.63
   2 !   17.9   1.7   1.8e-06    0.0032       3      36 ..     263     297 ..     261     373 .. 0.56
   3 ?   -0.2   0.3      0.76   1.4e+03      11      22 ..    1094    1107 ..    1081    1111 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 2.4
       PH_11 64 dsirssksddllleistetkiffl 87
                + + ss+s++ ++ei+t++k ++l
  EPX73989.1 13 KASTSSSSSKNKKEIQTGLKQLQL 36
                333446666666677777776654 PP

  == domain 2  score: 17.9 bits;  conditional E-value: 1.8e-06
       PH_11   3 Gyl..kkkgskaWkrrwfavlkdgvLeyYksekkkv 36 
                 Gyl  + +++ ++k rwf  l+dgvL+yYk++ +  
  EPX73989.1 263 GYLkkWTNYKSGYKLRWF-SLHDGVLSYYKNQDDAS 297
                 77622567777*******.***********666554 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.76
       PH_11   11 k..aWkrrwfavlk 22  
                  +   Wk +wf++ k
  EPX73989.1 1094 QmeEWKPKWFSLQK 1107
                  1457******6555 PP

>> zf-C4H2  Zinc finger-containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9  13.9    0.0038       6.8      35     177 ..     478     622 ..     451     719 .. 0.73

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0038
     zf-C4H2  35 eykkelelLeqEkmaHveeLrlIhaDinalEsvikeaeeekekslekakklyeeyk..klkeevnelrselglekledleeeeeellkeeifekqklka 131
                 +yk++le+ ++     +e+L+ + +  +++E+  +++e+ +++++++ ++l++ +k  +   ++ne+ s +  +  +d +ee+++  +e++f+ + +++
  EPX73989.1 478 HYKRKLENATRINALWAENLKTVVEEQDQIEERYHRSENHRRRTKRELRRLVSSMKnnPNNGQINETASLSSTSLSSDFSEEDQDNDRETFFDANANQT 576
                 57888888888888899**********************************998872146778999888777775677778888877778877766442 PP

     zf-C4H2 132 aavelkkesstapappapptsllskssqapsa......pstatasfrqqpPP 177
                  + +   +s ++ +   ppt  + ++  ap+       +s+a+a  ++qpPP
  EPX73989.1 577 -PSRI--QSPSKET---PPTFNQYPFDDAPAPtagkypSSEAPAPSNEQPPP 622
                 .2222..2222222...23333333332222222444233334444477777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1148 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1013  (0.0565006); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.81u 0.32s 00:00:01.13 Elapsed: 00:00:00.47
# Mc/sec: 7410.31
//
Query:       EPX73990.1  [L=187]
Description: 60S ribosomal protein L17 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      6e-37  126.0   0.2    9.3e-37  125.4   0.2    1.3  1  Ribosomal_L22  Ribosomal protein L22p/L17e
  ------ inclusion threshold ------
       0.14   12.3   0.0       0.19   11.8   0.0    1.2  1  DUF1877        Domain of unknown function (DUF1877)


Domain annotation for each model (and alignments):
>> Ribosomal_L22  Ribosomal protein L22p/L17e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.4   0.2     1e-40   9.3e-37       1     102 [.      17     150 ..      17     151 .. 0.98

  Alignments for each domain:
  == domain 1  score: 125.4 bits;  conditional E-value: 1e-40
                    EEEEEESS-HHHHHHHHHHHTTSBHHHHHHHHHT..-SST..............................THHHHHHHHHHHHHHHH..HT-GGGE CS
  Ribosomal_L22   1 akgsnlrvsfkklrevarlIrgmkveeAlkyLkf..skkk..............................aakfvlklLknaeanaelkgldvdsl 64 
                    a+g +lr++fk+ reva +I+gm++++A +++++  ++k+                              + k +l+lLknaeanae+kgld d+l
     EPX73990.1  17 ARGAYLRTHFKNSREVAFTINGMNLKKAFAFMDNvlEHKQavpfrrfnggvgrtaqgkefgvtqarwpvkSVKVILDLLKNAEANAESKGLDMDKL 112
                    7899*******************************988889******************************************************* PP

                    EEEEEEEEEEEEEEEEEEESTTEEEEEEEEEEEEEEEE CS
  Ribosomal_L22  65 vIeeiqvnkgpklkrrtyrArGrinpirkspchievvl 102
                    vI++iqvn +pk++rrtyrA Gr++ + ++pchiev++
     EPX73990.1 113 VIKHIQVNAAPKQHRRTYRAYGRVTAYLSHPCHIEVIV 150
                    *************************************8 PP

>> DUF1877  Domain of unknown function (DUF1877)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.1e-05      0.19      43     127 ..      38     121 ..      11     142 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.1e-05
     DUF1877  43 e.dlDKaWdaLhflltgdsegenplsevvlGgeelge.edegygparlltpeqVkevaeaLaeldfeelrerfdaeeleeaeiYpni 127
                 + +l Ka   +  +l+ ++    p++++  G+    + ++ g   ar ++ + Vk + + L++ ++++  + +d+++l  ++i+ n 
  EPX73990.1  38 GmNLKKAFAFMDNVLEHKQ--AVPFRRFNGGVGRTAQgKEFGVTQAR-WPVKSVKVILDLLKNAEANAESKGLDMDKLVIKHIQVNA 121
                 3689999999999999887..89999888887777667999999999.***********************************9883 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       490  (0.02733); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.45
# Mc/sec: 1257.48
//
Query:       EPX73991.1  [L=874]
Description: EST1 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.7e-17   63.2   3.6    2.7e-17   63.2   3.6    2.2  2  EST1_DNA_bind  Est1 DNA/RNA binding domain
    3.6e-14   53.5   3.0    6.8e-14   52.7   1.0    2.7  2  EST1           Telomerase activating protein Est1
  ------ inclusion threshold ------
      0.013   15.5   0.1        1.3    9.1   0.1    2.5  2  PyrBI_leader   PyrBI operon leader peptide


Domain annotation for each model (and alignments):
>> EST1_DNA_bind  Est1 DNA/RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   1.0       0.1     6e+02      59     153 ..     129     244 ..     122     260 .. 0.67
   2 !   63.2   3.6   4.5e-21   2.7e-17       1     254 [.     321     615 ..     321     641 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.1
                    HHT-TT-HHHHHHHHHHHHH.TT...---HHHHHHHHHHTTHHHHHHHHSTTTT..........TSSTTGHHHHHHHHHHHHHHHHHH........ CS
  EST1_DNA_bind  59 lfekirkklekgenkqskes.kq...ektpeellkrliilFlrlhgklftgtsf........kdelerevlkklqillseslkernlk........ 134
                     + +i++k++++  + +k++  q   + + e+l + + ++F +l  + ++ +s         +  +++ + + l+++l  +++++++k        
     EPX73991.1 129 TLTAIWTKVHYRVISFLKHKiIQasrKNNIEVLGSLVTLYFHYLDTCVHFYVSCafilikvySLQCLEPLASYLATQLAFRTSKKSHKakvksgss 224
                    577888888888888888888887763444444444445555555444444444448775553667777777777777777777777666777777 PP

                    .HHHHHHHHHHHHHHHHHHH CS
  EST1_DNA_bind 135 .daslllkmllinifaienl 153
                       ++llk l   if ++ l
     EPX73991.1 225 lRQDTLLKSLFSSIFGFKKL 244
                    78888888888888888755 PP

  == domain 2  score: 63.2 bits;  conditional E-value: 4.5e-21
                    HHHHHHHHHHH-TTBHHHHHHHHHHHHHT......................................T-HHHHHHHHHHHHHBSB--.TTHHHHHH CS
  EST1_DNA_bind   1 AlrYYllAaellPsnGepyNQlgviaiys......................................edkldavYyylRSllssnpf.ptAkeNLe 57 
                    A++YY++Aa  +P++G +y+Qlg+i +++                                       + l +  ++l Sl+ +    + A+++L+
     EPX73991.1 321 AKKYYHMAAFAVPNCGIHYHQLGLIEVQNadssasnspqnhhqglykspssssllsseassrsivddANLLGVSSFFLASLSPNGIAaKCARNSLL 416
                    899**************************************************************97777777799999998887778******** PP

                    HHHT-TT-HHHHHHHHHHHHHTT---HHHHHHHHHHTTHHHHHHHHSTTTT..TSSTTGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  EST1_DNA_bind  58 llfekirkklekgenkqskeskqektpeellkrliilFlrlhgklftgtsfkdelerevlkklqillseslkernlkdaslllkmllinifaienl 153
                    +++++i++k +  ++++          +++  +l++lFlrl++  f++ +      ++++k++++lls+slk+  ++  ++ll+m++++++a  ++
     EPX73991.1 417 IALKRILGKPNFFDPSLVM--------YQKDNSLVSLFLRLYALAFSDFDC-ISHTNSLVKRVRFLLSDSLKNARVS-YKTLLRMTYCALAARCLA 502
                    **********999999988........89999999****************.5667899*************99997.**************9977 PP

                    H-S--SXXXXXXXXX....XXXXHHHHHHHHHHHHHHHTGGGTTT..............-SS-THHHHHHHHHHHHHTT-HHHHHHHHT-HHHHHH CS
  EST1_DNA_bind 154 kdkssgeeskektll....llrlalrfifelfglllekvetlealk.........rdketpsatrvLpalrvylswlksnkslledvekdeklvss 236
                    ++ +   + +  + +    l+++++ ++fe++ + ++ + +l+al+         + +     + +  ++ +  + l s +   +d ++++ +++ 
     EPX73991.1 503 SKLGHSGTGDVIQRFpstnLATQTTVMFFEVLVDAANGQLPLHALSvssfsqgqsQPYGMLLQNIIFSPMVLPICTLVSFCLKHSDMWLTKEIRTG 598
                    7766666666554559555555555555555555555555555555999998888888888889999999999999999998889999******** PP

                    HHHHHHHHHH-------- CS
  EST1_DNA_bind 237 lsdllnellssellnksf 254
                    ls+++n+++ + + n+ +
     EPX73991.1 599 LSQIYNRFTFF-FENTKQ 615
                    *********94.222222 PP

>> EST1  Telomerase activating protein Est1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       2.8   1.7e+04     106     126 ..      18      38 ..       6      39 .. 0.75
   2 !   52.7   1.0   1.1e-17   6.8e-14       2     135 ..     129     310 ..     128     311 .. 0.82

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 2.8
                 TSHHH.HHHHHHHHHHHHHHH CS
        EST1 106 ssseqksavlklvhrcLiyLG 126
                 ++ +++ a+l +++ +L+ LG
  EPX73991.1  18 QNYDKSTALLSVLKESLVKLG 38 
                 445556899999999999999 PP

  == domain 2  score: 52.7 bits;  conditional E-value: 1.1e-17
                 HHHHHHHHTHHHHHHHHHHHHHHHH-------H.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-B-..........HTT.................. CS
        EST1   2 veellWrkvyyevikllkkqlknldsapkkkkkpvekrklklklvkflksaigfYqsliqrllsefel..........elssvlkvilk.......... 80 
                 +++ +W+kv+y+vi++lk+++ + +++    ++      l + + ++l+++ +fY s+   l++ ++l                               
  EPX73991.1 129 TLTAIWTKVHYRVISFLKHKIIQASRK----NNIEVLGSLVTLYFHYLDTCVHFYVSCAFILIKVYSLqcleplasylA---------Tqlafrtskks 214
                 6789*****************999943....23233344449*************************995553333330.........34446777778 PP

                 ..............................................-.....---------TTB--TTSHHH.HHHHHHHHHHHHHHHHHHHHHHHH CS
        EST1  81 ..........................................sktklpekessekseteseeeksslssseqksavlklvhrcLiyLGDlaRYreqf 135
                                                           s + +++k++ ++   +s   +++l+++++ ++++ +++ +Liy GD+ RY++q+
  EPX73991.1 215 hkakvksgsslrqdtllkslfssifgfkklfsgtlsvilqktSAVAASDKAAYSPAYVSSPLLELALPDKQA-HFLIGTIYGSLIYVGDIYRYLAQA 310
                 8899999999999999***********************988666667777776666788888999999999.*********************996 PP

>> PyrBI_leader  PyrBI operon leader peptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0     0.011        65       3      23 ..     409     429 ..     407     440 .. 0.83
   2 ?    9.1   0.1   0.00021       1.3      16      25 ..     630     639 ..     626     642 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.011
  PyrBI_leader   3 qCvRhsvLPRLkkDaGLPFFF 23 
                   +C R s L  Lk+  G P FF
    EPX73991.1 409 KCARNSLLIALKRILGKPNFF 429
                   7*****************888 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00021
  PyrBI_leader  16 DaGLPFFFPL 25 
                   D GLPFFFP+
    EPX73991.1 630 DVGLPFFFPM 639
                   99*******7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (874 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       514  (0.0286686); expected 358.6 (0.02)
Passed bias filter:                      303  (0.0169); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.70u 0.31s 00:00:01.01 Elapsed: 00:00:00.50
# Mc/sec: 5289.96
//
Query:       EPX73992.1  [L=289]
Description: ribosomal protein subunit L7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.4e-23   80.5   0.0    1.2e-22   79.8   0.0    1.3  1  Ribosomal_L5_C  ribosomal L5P family C-terminus
    1.4e-11   44.6   0.0    2.8e-11   43.6   0.0    1.5  1  Ribosomal_L5    Ribosomal protein L5


Domain annotation for each model (and alignments):
>> Ribosomal_L5_C  ribosomal L5P family C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.8   0.0   1.4e-26   1.2e-22       1      89 [.     182     275 ..     182     279 .. 0.94

  Alignments for each domain:
  == domain 1  score: 79.8 bits;  conditional E-value: 1.4e-26
  Ribosomal_L5_C   1 piGvkvtLrgekmyefldkllevvlprlrdFkGiskssfdgrGnvsfGikeqii..fpeieydkd...kgifGmditivttaktdeearallke 89 
                     p+G++vtL+ge my+fl+ l e+vlp+l+dFkGis++ +d++Gn+sfG++ ++   fp+ie+ ++   + + G+++++vt+a+ ++ ar  l++
      EPX73992.1 182 PVGASVTLEGEPMYNFLSVLSELVLPQLHDFKGISSTVGDQTGNISFGLPGNALplFPQIEAVYEmypHSLPGFHVNVVTNAQDTRLARFALSS 275
                     79**************************************************************99**9**************99988866654 PP

>> Ribosomal_L5  Ribosomal protein L5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.6   0.0   3.1e-15   2.8e-11       5      57 .]     126     178 ..     123     178 .. 0.97

  Alignments for each domain:
  == domain 1  score: 43.6 bits;  conditional E-value: 3.1e-15
                   S-EEEEEEEEEE-SSSSSCHHHHHCCHHHHCCCHSS--EECC--TTCTTTCSC CS
  Ribosomal_L5   5 vPrleKivinmgvGeagedkkllekaakeLaeItGQkPvvtkakksianFkiR 57 
                    P ++K+v++++v+ea +dk +l + ++  ++ItG +P + ka+k+++ +++R
    EPX73992.1 126 LPNISKVVVSTMVKEALQDKSHLLSTIMAFRSITGVEPEIIKARKDVSPWRLR 178
                   599*************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       263  (0.014669); expected 358.6 (0.02)
Passed bias filter:                      252  (0.0140554); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.30s 00:00:00.90 Elapsed: 00:00:00.54
# Mc/sec: 1615.46
//
Query:       EPX73993.1  [L=649]
Description: STE/STE11 protein kinase Byr2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-70  237.8   0.0    2.1e-70  237.1   0.0    1.4  1  Pkinase         Protein kinase domain
    5.6e-49  166.7   0.0    1.9e-48  165.0   0.0    1.8  2  Pkinase_Tyr     Protein tyrosine kinase
    2.6e-15   56.3   0.0      8e-15   54.7   0.0    1.9  1  SAM_2           SAM domain (Sterile alpha motif)
    4.3e-11   43.1   0.0      1e-10   41.9   0.0    1.6  1  SAM_1           SAM domain (Sterile alpha motif)
    1.1e-06   28.2   0.0    5.3e-05   22.7   0.0    2.4  2  Kinase-like     Kinase-like
    3.6e-06   26.0   0.0    7.3e-06   25.0   0.0    1.4  1  Pkinase_fungal  Fungal protein kinase
    1.1e-05   25.6   0.0    2.2e-05   24.7   0.0    1.5  1  Ras_bdg_2       Ras-binding domain of Byr2
  ------ inclusion threshold ------
      0.014   14.4   0.0      0.025   13.6   0.0    1.3  1  Seadorna_VP7    Seadornavirus VP7
      0.069   13.1   0.0       0.48   10.3   0.0    2.0  2  APH             Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  237.1   0.0   1.1e-73   2.1e-70       5     264 .]     387     647 ..     383     647 .. 0.96

  Alignments for each domain:
  == domain 1  score: 237.1 bits;  conditional E-value: 1.1e-73
                 EEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH......HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--H CS
     Pkinase   5 eklGeGsfGkVykaveketgkivAvKkikkekakkkke......kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslse 97 
                   +G+GsfG+Vy ++++++g+ +AvK+i+  + kk+ke      ++++ Ei++l++l h++iv+++++  ++++l ++leyv+gg+++ lle  gs++ 
  EPX73993.1 387 ALIGSGSFGQVYLGMNASSGELMAVKQISLGDFKKSKElhsslfNSLVGEINLLQELAHEHIVQYLGSNLTSEYLNIFLEYVPGGSVTGLLEMYGSFEA 485
                 67******************************9999999999999************************************************9***** PP

                 HHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.......BCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHH CS
     Pkinase  98 eeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.......ltsfvgtseYlAPEvlkeneyskkvDvWslGvilye 189
                   +++++kq+legl+ylHskgi+HrD+K +NiL+d+kg++Ki+DFG++k+le +++        +s  g+s ++APEv+k++e+++k+D+WslG++++e
  EPX73993.1 486 PLVRNFIKQTLEGLQYLHSKGIVHRDIKGANILVDNKGKIKISDFGISKKLELENPddknvssRQSLQGSSFWMAPEVVKQTEHTEKTDIWSLGCLVIE 584
                 ****************************************************9998999***9************************************ PP

                 HHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 190 lltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 +lt k+p++           +dq+++i+ki +  +   + + ++ +++ d+l+k ++ d ++R+ta+ellqhp++
  EPX73993.1 585 MLTSKHPYP----------TCDQMQAIFKIGQ--NIPPEYPPDVAPSVHDFLNKTFAIDCNERPTASELLQHPFI 647
                 *********..........7899999999974..5777888999*****************************97 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       0.9   1.8e+03      42      71 ..      51      80 ..      48      97 .. 0.84
   2 !  165.0   0.0   9.6e-52   1.9e-48       5     257 ..     387     643 ..     384     644 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.9
                 HHHHHHHHHHHHHHHTS-BTTB--EEEEEE CS
  Pkinase_Tyr 42 eeekeelleeakimkklkhpnivkllgvct 71
                  e+++e+l+e + +++  +p i++++++  
   EPX73993.1 51 GEKRQEFLKERNRLRDAPKPCILRFIACNG 80
                 56799*****************99998754 PP

  == domain 2  score: 165.0 bits;  conditional E-value: 9.6e-52
                  EEEEEESSEEEEEEEEETTTTSSEEEEEEEEE.....S..TTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHT CS
  Pkinase_Tyr   5 kklGeGafGkVvegtlkgekekkevkVavKtl.....k..eeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkk 95 
                    +G+G+fG+V+ g       ++ +  avK++     k  +e +++  ++l+ e++++++l h++iv++lg  + +e l i +eyv+gG++   L+  
   EPX73993.1 387 ALIGSGSFGQVYLGMNA----SSGELMAVKQIslgdfKksKELHSSLFNSLVGEINLLQELAHEHIVQYLGSNLTSEYLNIFLEYVPGGSVTGLLEMY 480
                  569***********999....66777888887332222112223333678888******************************************998 PP

                  CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEET....TTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHH CS
  Pkinase_Tyr  96 ekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardi....ekddeyvkkeeaklpvkWmapEslkekkftsksDvW 189
                     +++   + +f+ q  +G++yL+sk +vHrd+   N+L++++ ++kisDfG+++++     +d++ +++++ + +  WmapE++k+++ t+k+D+W
   EPX73993.1 481 --GSFEAPLVRNFIKQTLEGLQYLHSKGIVHRDIKGANILVDNKGKIKISDFGISKKLelenPDDKNVSSRQSLQGSSFWMAPEVVKQTEHTEKTDIW 576
                  ..9*****************************************************99543224455588999999********************** PP

                  HHHHHHHHHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 190 sfGvllwEiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfselve 257
                  s G l++E++t +++pyp++++++++ k+ ++   e p ++ ++++++++k ++ d +eRpt sel++
   EPX73993.1 577 SLGCLVIEMLT-SKHPYPTCDQMQAIFKIGQNIPPEYPPDVAPSVHDFLNKTFAIDCNERPTASELLQ 643
                  ***********.9**************************************************99976 PP

>> SAM_2  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.7   0.0     4e-18     8e-15       2      66 .]       2      65 ..       1      65 [. 0.97

  Alignments for each domain:
  == domain 1  score: 54.7 bits;  conditional E-value: 4e-18
                GGHHHHHHHHHHHHTTTGGGHHHHHHTTCSHHHHHTTSCHHHHHHTTHHHHHHHHHHHHHHHHHH CS
       SAM_2  2 eswsledvaeWLrsiglkqytdnFrdagitgaelllrlteedLkrlGitsvghrkkilkkiqelk 66
                e+ s+e v+ WL++ g+++y+d+F+++ i g ++l+rl++  L++lGit+   r++ lk+ ++l+
  EPX73993.1  2 ENYSVEKVCGWLKKNGFGEYVDAFEQHRIEG-RHLARLSHPLLEELGITDGEKRQEFLKERNRLR 65
                7889***************************.****************************99985 PP

>> SAM_1  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.9   0.0   5.1e-14     1e-10       3      49 ..       4      50 ..       2      60 .. 0.92

  Alignments for each domain:
  == domain 1  score: 41.9 bits;  conditional E-value: 5.1e-14
                TTHSSHHHHHHHTTSGGGHHHHHTTTSSHHHHTTSCHHHHHHCTTTS CS
       SAM_1  3 wsvedVgeWLesiglgqYadlFrageidgdaLlllteddLeklgvtl 49
                 sve V+ WL++ g+g+Y+d+F++++i g++L++l++  Le+lg+t 
  EPX73993.1  4 YSVEKVCGWLKKNGFGEYVDAFEQHRIEGRHLARLSHPLLEELGITD 50
                689******************************************98 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0     0.028        56      13      55 ..     382     424 ..     375     448 .. 0.86
   2 !   22.7   0.0   2.7e-08   5.3e-05     157     250 ..     499     592 ..     485     624 .. 0.77

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.028
  Kinase-like  13 tlvrgellkkgdrsvvfevkdqetgeplavkvfllps.easkkd 55 
                    +rg l++ g ++ v++  +   ge +avk+ +l + +  +k+
   EPX73993.1 382 RWIRGALIGSGSFGQVYLGMNASSGELMAVKQISLGDfKK-SKE 424
                  5799******************************999444.444 PP

  == domain 2  score: 22.7 bits;  conditional E-value: 2.7e-08
  Kinase-like 157 aanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvlseve...kgfaPpEllgsrggytrknktkmthkldaWqlGlviyriwclklPl 250
                   ++L++kg+vh +++  n+l d+kg++++ +f+   +   + +  ++    ++++   +  +       ++t+ t k+d W lG  +  +   k P 
   EPX73993.1 499 LQYLHSKGIVHRDIKGANILVDNKGKIKISDFGISKKLELENPDDKNVssrQSLQGSSFWMAPE---VVKQTEHTEKTDIWSLGCLVIEMLTSKHPY 592
                  589*****************************96555555544311111224455444444433...3477999**********9999998888775 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.0   3.7e-09   7.3e-06     314     399 ..     494     577 ..     487     581 .. 0.79

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 3.7e-09
  Pkinase_fungal 314 DaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesga....rertGTleFmaievlkgeeHsyrhDLES 399
                     + ++g++ L+  +gi+HrDi   Nil+      ++ k  ++D+ + k+l+ ++ ++++    +   G   +ma ev+k++eH+   D+ S
      EPX73993.1 494 QTLEGLQYLH-SKGIVHRDIKGANILVD-----NKGKIKISDFGISKKLELENPDDKNvssrQSLQGSSFWMAPEVVKQTEHTEKTDIWS 577
                     678999****.***************99.....45666777777777776543333223344999******************9999865 PP

>> Ras_bdg_2  Ras-binding domain of Byr2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.0   1.1e-08   2.2e-05       3      98 ..      74     163 ..      72     165 .. 0.87

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 1.1e-08
   Ras_bdg_2   3 kfiledgstkkvnvsgcfnaeeikrkvlkklglkekeveeydvyvlssnekeslrlLsdvELvtichspdrleknrlilvk.kneePtekalevskk 98 
                 +fi  +g+t+ v  +   n +e ++ +l+k++l ++   +y + v++s   +++r++++  + +i h+++ +e++rli+v+  +  P+ + l++s +
  EPX73993.1  74 RFIACNGQTRAV--QSFGNYRETLNLALRKFSLPDEA--KYVICVTQS---SQVRPITEEAFQEIYHNSSSPERERLIIVSeTKTCPSFEDLRKSWE 163
                 799999999975..78899***************999..788888888...9*****************************5555678777777655 PP

>> Seadorna_VP7  Seadornavirus VP7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.3e-05     0.025     143     188 ..     488     531 ..     483     577 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.3e-05
  Seadorna_VP7 143 tvniivaglkdLmdfhsestnllhGDcnpenlmcDknGylklvDPv 188
                   + n+i   l+ L+ +h  s++++h D++  n++ D+ G +k+ D +
    EPX73993.1 488 VRNFIKQTLEGLQYLH--SKGIVHRDIKGANILVDNKGKIKISDFG 531
                   579*************..899*********************9965 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.45     9e+02      33      84 ..     429     475 ..     422     487 .. 0.80
   2 ?   10.3   0.0   0.00024      0.48     163     187 ..     502     525 ..     483     533 .. 0.76

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.45
                 -HHHHHHHHHHHHHHHHTT-B--B-CTTBS-EEETTEEEEEEE----EE-SS CS
         APH  33 aaeeirrevallrlLakagvpvPevlagdtddeeigllfalieyvpgrsllr 84 
                 + +++ +e  ll+ La   +   + l    ++  +++l  ++eyvpg s++ 
  EPX73993.1 429 LFNSLVGEINLLQELAHEHI--VQYLG---SNLTSEYLNIFLEYVPGGSVTG 475
                 66788899999999999877..48888...77888888999*****998766 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00024
                 SS-EEEE-SS-SGGGEEEC..TTEE CS
         APH 163 elptvllHgDlhpgNllvdpddgrv 187
                   +++++H+D++  N+lvd ++g++
  EPX73993.1 502 LHSKGIVHRDIKGANILVD-NKGKI 525
                 5689***************.88876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (649 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       555  (0.0309554); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.70u 0.31s 00:00:01.01 Elapsed: 00:00:00.50
# Mc/sec: 3903.88
//
Query:       EPX73994.1  [L=196]
Description: RNA binding protein Mlo3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.7e-15   56.6   0.0      3e-15   55.8   0.0    1.4  1  RRM_1            RNA recognition motif. (a.k.a. RRM, RBD, or 
    1.1e-06   29.1   1.1    1.1e-06   29.1   1.1    2.7  3  FoP_duplication  C-terminal duplication domain of Friend of P
  ------ inclusion threshold ------
       0.03   13.9   0.0      0.046   13.3   0.0    1.2  1  Methyltransf_15  RNA cap guanine-N2 methyltransferase


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.8   0.0   5.1e-19     3e-15       1      67 [.      57     124 ..      57     126 .. 0.97

  Alignments for each domain:
  == domain 1  score: 55.8 bits;  conditional E-value: 5.1e-19
                 EEEESETTTSSHHHHHHHHHT.TSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTE CS
       RRM_1   1 lfVgnLppdvteeeLkelFsk.fGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggr 67 
                 ++V+nLppdvte +++elF k +Gp k+++l +  +g+skg+a V F  + dA++A e++ g++++g+
  EPX73994.1  57 IIVSNLPPDVTEAQVRELFVKsIGPCKRVSLAYGPNGRSKGIATVIFSRQGDATRAYEQYEGRMVDGT 124
                 78***************************************************************997 PP

>> FoP_duplication  C-terminal duplication domain of Friend of PRMT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.2      0.54   3.2e+03      51      58 ..       4      11 ..       2      20 .. 0.69
   2 ?    0.6   0.8      0.14   8.4e+02      36      49 ..      22      35 ..      12      46 .. 0.43
   3 !   29.1   1.1   1.8e-10   1.1e-06      23      64 ..     153     193 ..     135     196 .] 0.67

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.54
  FoP_duplication 51 eLDaeLDa 58
                     eLD+ LDa
       EPX73994.1  4 ELDQSLDA 11
                     67777776 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.14
  FoP_duplication 36 ggrggrkkkkpltk 49
                     ++r++r +k++++k
       EPX73994.1 22 RKRRSRVNKPKASK 35
                     11122222222222 PP

  == domain 3  score: 29.1 bits;  conditional E-value: 1.8e-10
  FoP_duplication  23 ggrggrggrgrgrggrggrkkkkpltkeeLDaeLDaYmgkkt 64 
                      + ++ + +++r+ ++++g ++++++++eeLD+e+D+Y g++t
       EPX73994.1 153 TPNKPKASKKRNVRRSKG-NNRPKKSAEELDKEMDDYFGSNT 193
                      333334444444444444.88*****************9665 PP

>> Methyltransf_15  RNA cap guanine-N2 methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   7.6e-06     0.046      71     160 ..       8     100 ..       2     105 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 7.6e-06
  Methyltransf_15  71 kvdlvflSpPwGGpsYkkqekfdlkk....klkplkleqllkeslklskniilfLPrnsdlnqlaaltaevlekaakvkvveikenglvkalla 160
                      + d +++S P GG+  ++  +   k     k  + +++++ +  ++ sk i+  LP +++  q+++l  + +++ ++v++  +  ng++k++++
       EPX73994.1   8 SLDAIIASKPKGGIRKRRSRVNKPKAskanKTSNDTVSTIKSVISEESKIIVSNLPPDVTEAQVRELFVKSIGPCKRVSLA-YGPNGRSKGIAT 100
                      4799**********998877665543201155566677777778888899999**************99999999999865.678999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1008  (0.0562218); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 1432.23
//
Query:       EPX73995.1  [L=487]
Description: cyclin Clg1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.5e-05   23.0   0.0    0.00017   22.0   0.0    1.5  1  Cyclin    Cyclin
      0.005   16.6   0.8     0.0091   15.7   0.5    1.5  1  Cyclin_N  Cyclin, N-terminal domain


Domain annotation for each model (and alignments):
>> Cyclin  Cyclin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0   1.9e-08   0.00017     112     157 ..     362     407 ..     327     411 .. 0.92

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 1.9e-08
                 HHHHHHHHHHHHHH-SS---HHHHHHHHTS-HHHHHHHHHHHHHHT CS
      Cyclin 112 RllivallvatKflvDlsysnekfakvggislkELnkLEidFlflv 157
                  ll  al  a K l+D   +n+ +++v+g + + Lnk E d+l  +
  EPX73995.1 362 ALLTSALILANKYLDDNTFTNQSWSQVTGFRTQLLNKFEQDWLTSM 407
                 58999************************************99876 PP

>> Cyclin_N  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.5     1e-06    0.0091      36     127 .]     311     412 ..     296     412 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1e-06
                 HHHHHHHHHTT--TTHHHHHHHHH.HHHHHHS---CC............CHHHHHHHHHHHHHHHHSSS---HHHHHHHTTTSS-HHHHHHHHHHHHHH CS
    Cyclin_N  36 dwlvevaekfkltpetlflavnyl.dRflskksvpkd............klqlvgatcLllAaKveeisppkledlvyitdeafteeeilemErliLet 121
                 +++++v ++++l +   +la++y+ dR+ +  s + +            ++  + +++L+lA K+ ++++ + + +  +t+  f+ + ++++E++ L+ 
  EPX73995.1 311 KFVLQVLTSTRLPRASCLLALSYIsDRLDA-ASQSSEflnqwtketpffQICALLTSALILANKYLDDNTFTNQSWSQVTG--FRTQLLNKFEQDWLTS 406
                 577888888888888888888887344444.333333366688888888999999************************98..**************** PP

                 TTT--- CS
    Cyclin_N 122 Lnfdls 127
                 ++++l+
  EPX73995.1 407 MCWNLN 412
                 ****96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (487 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       487  (0.0271627); expected 358.6 (0.02)
Passed bias filter:                      295  (0.0164538); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.46
# Mc/sec: 3156.63
//
Query:       EPX73996.1  [L=130]
Description: hypothetical protein SOCG_05085 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.046   13.5   0.0      0.065   13.0   0.0    1.3  1  DUF2157   Predicted membrane protein (DUF2157)
        1.2    9.6   6.6       0.36   11.3   1.0    2.1  2  FtsX      FtsX-like permease family


Domain annotation for each model (and alignments):
>> DUF2157  Predicted membrane protein (DUF2157)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   7.2e-06     0.065      70     134 ..      17     127 ..       5     130 .] 0.81

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 7.2e-06
     DUF2157  70 llvllllslllgavlwrdr..............................................rvpprlgeallllaalllgaaialvgqifqlsgd 122
                   ++  l++l+++ l r+r                                               ++p+lg + ++l+ ll ++++  ++  f+ s++
  EPX73996.1  17 QTLAHSLFHLGMLSLHRTRpiytelctallflkaspldhvdglftfpnqtktlqqkpsstwlqplLKSPFLGLVCCFLGLLLSLVSFSTFSSCFHSSSS 115
                 444455556666666666688888888888888888888888888888888888889999999997799****************************** PP

     DUF2157 123 aysllllwalll 134
                    ++ ++++l 
  EPX73996.1 116 LDWIFGISCFLS 127
                 *****9999875 PP

>> FtsX  FtsX-like permease family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.5     0.054   4.9e+02      70      86 ..       4      20 ..       1      33 [. 0.63
   2 ?   11.3   1.0     4e-05      0.36      15      69 ..      74     125 ..      72     127 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.054
        FtsX 70 liiivlllllallagll 86
                 +++v++++l+ l +l+
  EPX73996.1  4 GFVFVFVFVLFFLQTLA 20
                45566666666555444 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 4e-05
        FtsX  15 kqvlllllteillitlvalviGlglgllaaqllsdvllssvfsselkisidlitv 69 
                  +++l+ l+ + +++lv++++Gl+l+l+    +s+ ++ss   s+l++ + ++ +
  EPX73996.1  74 SSTWLQPLLKSPFLGLVCCFLGLLLSLVSFSTFSSCFHSS---SSLDWIFGISCF 125
                 5677888899999****************99999999998...999999887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       828  (0.0461822); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 899.74
//
Query:       EPX73997.1  [L=616]
Description: transcription factor Scr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.3e-08   33.5  11.5    0.00027   21.2   3.4    2.7  2  zf-C2H2    Zinc finger, C2H2 type
    6.7e-08   32.6  19.5    5.4e-05   23.4   2.7    4.2  4  zf-H2C2_2  Zinc-finger double domain
    0.00059   20.5   9.4       0.16   12.9   2.4    2.7  2  zf-C2H2_4  C2H2-type zinc finger
     0.0097   16.0   1.8      0.017   15.2   1.8    1.3  1  DUF1644    Protein of unknown function (DUF1644)
  ------ inclusion threshold ------
        1.8    8.6   3.8         15    5.7   0.4    2.4  2  zf-C2H2_6  C2H2-type zinc finger


Domain annotation for each model (and alignments):
>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   3.4   7.5e-08   0.00027       1      23 []      68      90 ..      68      90 .. 0.99
   2 !   16.6   1.1   2.2e-06    0.0077       2      23 .]      97     120 ..      96     120 .. 0.92

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 7.5e-08
                EEETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2  1 ykCpdCgksFkrksnLkrHirtH 23
                ykCp C+k F r ++ +rHirtH
  EPX73997.1 68 YKCPLCSKAFYRLEHQTRHIRTH 90
                9*********************9 PP

  == domain 2  score: 16.6 bits;  conditional E-value: 2.2e-06
                 EET..TTTEEESSHHHHHHHHHCC CS
     zf-C2H2   2 kCp..dCgksFkrksnLkrHirtH 23 
                  C+  +C k+F+r+++L+rH r+H
  EPX73997.1  97 ACTypGCLKRFSRSDELTRHARIH 120
                 588889****************99 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   1.0     8e-06     0.029      12      24 ..      65      77 ..      59      79 .. 0.90
   2 !   23.4   2.7   1.5e-08   5.4e-05       3      25 ..      84     108 ..      84     109 .. 0.89
   3 ?    4.1   0.2      0.02        71       2      11 ..     113     122 ..     112     126 .. 0.87
   4 ?   -0.6   0.1      0.59   2.1e+03      13      18 ..     200     205 ..     195     208 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 8e-06
   zf-H2C2_2 12 ekpyeCplCdkaF 24
                ++py+CplC+kaF
  EPX73997.1 65 PRPYKCPLCSKAF 77
                689*********9 PP

  == domain 2  score: 23.4 bits;  conditional E-value: 1.5e-08
   zf-H2C2_2   3 rrHirkHtgekpyeCp..lCdkaFk 25 
                 +rHir+Htgekp+ C    C k+F+
  EPX73997.1  84 TRHIRTHTGEKPHACTypGCLKRFS 108
                 59***********999767****97 PP

  == domain 3  score: 4.1 bits;  conditional E-value: 0.02
   zf-H2C2_2   2 LrrHirkHtg 11 
                 L+rH r Ht+
  EPX73997.1 113 LTRHARIHTN 122
                 99*******5 PP

  == domain 4  score: -0.6 bits;  conditional E-value: 0.59
   zf-H2C2_2  13 kpyeCp 18 
                 +py Cp
  EPX73997.1 200 FPYPCP 205
                 8****9 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   2.4   4.5e-05      0.16       1      23 [.      68      90 ..      68      91 .. 0.94
   2 !   11.2   0.7   0.00015      0.55       2      23 ..      97     120 ..      96     121 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 4.5e-05
   zf-C2H2_4  1 fkCpiCgksFsskkaLlrHlkth 23
                +kCp+C+k F + ++  rH++th
  EPX73997.1 68 YKCPLCSKAFYRLEHQTRHIRTH 90
                8*********99999899****9 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00015
   zf-C2H2_4   2 kCpi..CgksFsskkaLlrHlkth 23 
                  C++  C k+Fs++++L rH + h
  EPX73997.1  97 ACTYpgCLKRFSRSDELTRHARIH 120
                 799999**************9998 PP

>> DUF1644  Protein of unknown function (DUF1644)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   1.8   4.7e-06     0.017      52     138 ..      33     121 ..      17     139 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 4.7e-06
     DUF1644  52 sksseeessssassekeseeveeeseleekeesaelkCPlCrGevkgwk.vveearkylnekkrsCseesC.sfvGnykelrkharreh 138
                 s+s+ +++s+s+s+ ++++++++++++++ ++    kCPlC  +    +    ++r++  ek  +C+   C +     +el +har + 
  EPX73997.1  33 SNSNPSSNSNSNSNPNANANKAARTNVKNPDAPRPYKCPLCSKAFYRLEhQTRHIRTHTGEKPHACTYPGClKRFSRSDELTRHARIHT 121
                 334444444444445555555556666778888999******9999886256789****************433456789*****9754 PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.4    0.0042        15       2      11 ..      68      77 ..      68      80 .. 0.92
   2 ?    3.4   0.2     0.022        78       7      21 ..     103     117 ..      96     120 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0042
   zf-C2H2_6  2 heCsvCsksF 11
                ++C+ Csk F
  EPX73997.1 68 YKCPLCSKAF 77
                9*******99 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.022
   zf-C2H2_6   7 CsksFpslqaLggHk 21 
                 C+k+F+  ++L+ H 
  EPX73997.1 103 CLKRFSRSDELTRHA 117
                 ***********9995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (616 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       799  (0.0445647); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.67u 0.27s 00:00:00.94 Elapsed: 00:00:00.42
# Mc/sec: 4377.74
//
Query:       EPX73998.1  [L=112]
Description: prefoldin subunit 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.5e-19   67.5   6.3    9.5e-19   67.3   6.3    1.0  1  Prefoldin_2  Prefoldin subunit
     0.0096   16.0   0.2     0.0096   16.0   0.2    2.3  2  MYO10_CC     Unconventional myosin-X coiled coil domain
  ------ inclusion threshold ------
      0.059   13.5   1.3        0.1   12.7   1.3    1.6  1  AbiTii       AbiTii


Domain annotation for each model (and alignments):
>> Prefoldin_2  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.3   6.3   1.6e-22   9.5e-19       2     104 ..       7     109 ..       6     111 .. 0.97

  Alignments for each domain:
  == domain 1  score: 67.3 bits;  conditional E-value: 1.6e-22
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-TT--EEEEETTEEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Prefoldin_2   2 elinkfqqlqqqlqqlaqqikqletqlkelelvleelelldedtkvyklvGdvlvkqdkeevkeeLeerketlekeiktlekqleklekeleelkeel 99 
                  ++++k  ++qqql+ +  q++ +e+ lk  el+++el+ + +d+ vy  vG++++ +d+++v+++ +e+++ l+k i++l k++e++e++  +  ++l
   EPX73998.1   7 QIQEKAVDSQQQLRSILLQVTAKERSLKIKELAKKELNGVGKDAAVYGGVGKMFIRTDLDSVRKTIDEEIAGLQKDIDSLRKKKEYHETTTLNANAHL 104
                  7899********************************************************************************************** PP

                  HCCTS CS
  Prefoldin_2 100 qkklq 104
                  qk+ +
   EPX73998.1 105 QKMKE 109
                  *9865 PP

>> MYO10_CC  Unconventional myosin-X coiled coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.5      0.35   2.1e+03      43      43 ..      21      21 ..       2      45 .. 0.56
   2 !   16.0   0.2   1.6e-06    0.0096       7      43 ..      74     109 ..      73     112 .] 0.79

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.35
    MYO10_CC 43 d 43
                 
  EPX73998.1 21 S 21
                1 PP

  == domain 2  score: 16.0 bits;  conditional E-value: 1.6e-06
    MYO10_CC   7 EEILRLErEIerLqrqkedqvsslceesrqelqrlRd 43 
                 EEI  L + I+ L+++ke ++++   +  + lq++++
  EPX73998.1  74 EEIAGLQKDIDSLRKKKEYHETTT-LNANAHLQKMKE 109
                 9*****************999763.344556676665 PP

>> AbiTii  AbiTii
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   1.3   1.7e-05       0.1       2      48 ..       4      47 ..       3     109 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1.7e-05
      AbiTii  2 lveelqedaldessslsslLrkakvlArklgskelreWvksElnGYp 48
                l+ ++qe a+d+++ l s+L+++    r l+    +e +k+ElnG +
  EPX73998.1  4 LAAQIQEKAVDSQQQLRSILLQVTAKERSLKI---KELAKKELNGVG 47
                899*******************9875555555...555789999965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1235  (0.0688828); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 854.08
//
Query:       EPX73999.1  [L=159]
Description: fission protein Fis1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-16   60.5   2.2    1.9e-16   59.8   2.2    1.3  1  Fis1_TPR_C  Fis1 C-terminal tetratricopeptide repeat
      1e-13   50.7   0.1    1.6e-13   50.1   0.1    1.3  1  Fis1_TPR_N  Fis1 N-terminal tetratricopeptide repeat
    0.00025   20.9   0.6     0.0012   18.8   0.3    2.1  2  TPR_2       Tetratricopeptide repeat
     0.0003   21.2   0.6    0.00099   19.6   0.5    2.0  2  TPR_6       Tetratricopeptide repeat
     0.0039   17.9   0.1      0.019   15.8   0.1    2.0  2  TPR_14      Tetratricopeptide repeat
     0.0063   17.0   0.2     0.0095   16.4   0.2    1.3  1  TPR_19      Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.014   15.7   0.1          1    9.7   0.1    2.2  2  TPR_12      Tetratricopeptide repeat
      0.015   15.1   0.5      0.035   13.9   0.5    1.7  1  TPR_1       Tetratricopeptide repeat
      0.036   14.2   0.1      0.048   13.8   0.1    1.3  1  TPR_9       Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> Fis1_TPR_C  Fis1 C-terminal tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.8   2.2   9.7e-20   1.9e-16       2      53 .]      79     130 ..      78     130 .. 0.97

  Alignments for each domain:
  == domain 1  score: 59.8 bits;  conditional E-value: 9.7e-20
                 HHHHHHHHHHHHHT-HHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHTTT CS
  Fis1_TPR_C   2 eclYylAlGhyklgeYseArryvdalLeiEPenrQaqsLkeliedkikkegl 53 
                 e lYy+Al +yk+++Y+e+rry+++lL+++P+n Qa+ Lk+l+ ++++ eg+
  EPX73999.1  79 ETLYYIALTQYKIKQYEESRRYLNMLLAKDPSNPQALRLKSLLYNAVTTEGY 130
                 78************************************************96 PP

>> Fis1_TPR_N  Fis1 N-terminal tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.1   0.1     8e-17   1.6e-13       1      32 [.      41      72 ..      41      72 .. 0.98

  Alignments for each domain:
  == domain 1  score: 50.1 bits;  conditional E-value: 8e-17
  Fis1_TPR_N  1 qtkFnYAWgLvkSknredqqeGiaLLeelyrd 32
                qtkFn+AW+Lv+S+n +++q+G+ L++ +yrd
  EPX73999.1 41 QTKFNLAWALVCSENLQQVQQGLTLFCTVYRD 72
                9*****************************97 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.95   1.9e+03       5      18 ..      44      57 ..      41      58 .. 0.81
   2 !   18.8   0.3   6.1e-07    0.0012       2      34 .]      79     111 ..      78     111 .. 0.95

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.95
       TPR_2  5 ynlGlayyklgdye 18
                +nl++a+  + +++
  EPX73999.1 44 FNLAWALVCSENLQ 57
                899*9998888876 PP

  == domain 2  score: 18.8 bits;  conditional E-value: 6.1e-07
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleldPnn 34 
                 e ly+++l  yk ++yee +++++  l+ dP n
  EPX73999.1  79 ETLYYIALTQYKIKQYEESRRYLNMLLAKDPSN 111
                 679****************************87 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       2.9   5.8e+03      12      23 ..      55      66 ..      44      75 .. 0.53
   2 !   19.6   0.5     5e-07   0.00099       2      32 ..      80     110 ..      79     111 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 2.9
                HHHHHHHHHHHH CS
       TPR_6 12 klgdtdkAleal 23
                +l++ ++ l+++
  EPX73999.1 55 NLQQVQQGLTLF 66
                334555555555 PP

  == domain 2  score: 19.6 bits;  conditional E-value: 5e-07
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6   2 AlyklalsyrklgdtdkAlealerlikeYPd 32 
                  ly++al ++k +++++++++l+ l+ + P 
  EPX73999.1  80 TLYYIALTQYKIKQYEESRRYLNMLLAKDPS 110
                 69*********88***************996 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.97   1.9e+03       6      35 ..      47      77 ..      44      86 .. 0.68
   2 !   15.8   0.1   9.5e-06     0.019       3      41 ..      80     118 ..      78     121 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.97
      TPR_14  6 alaeal.lalGdpdeAiallrralalaPdda 35
                a a ++ ++l++ ++ ++l+  + +++P+ +
  EPX73999.1 47 AWALVCsENLQQVQQGLTLFCTVYRDFPERR 77
                4445544578888889999888888888764 PP

  == domain 2  score: 15.8 bits;  conditional E-value: 9.5e-06
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddaeawlll 41 
                  l+ +a   +   +++e++++l+ +la++P++++a++l 
  EPX73999.1  80 TLYYIALTQYKIKQYEESRRYLNMLLAKDPSNPQALRLK 118
                 6777788888889*********************99875 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.2   4.8e-06    0.0095       8      66 ..      60     119 ..      55     121 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 4.8e-06
      TPR_19   8 aeAlalleqalqedpk.naearllLAeallalgqldeAealLdalpeedpddaryasLlA 66 
                 ++ l l+  ++ + p+  +e +++ A  +++ +q++e ++ L+ l+++dp ++++ +L+ 
  EPX73999.1  60 QQGLTLFCTVYRDFPErRLETLYYIALTQYKIKQYEESRRYLNMLLAKDPSNPQALRLKS 119
                 5555666667778888889999999*****************************999986 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.033        66      31      63 ..      26      58 ..      22      61 .. 0.78
   2 ?    9.7   0.1    0.0005         1      44      73 ..      77     106 ..      68     110 .. 0.82

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.033
      TPR_12 31 eiarrllGpdh.pltattlrnLgrlyralgryee 63
                +i +++ + +h + t++t +nL++++  ++++++
  EPX73999.1 26 QIKEQY-DSEHpLITLQTKFNLAWALVCSENLQQ 58
                555554.5667699************99998876 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.0005
      TPR_12  44 tattlrnLgrlyralgryeeAlelleeala 73 
                  ++tl+ ++ ++++ ++yee +++l+  la
  EPX73999.1  77 RLETLYYIALTQYKIKQYEESRRYLNMLLA 106
                 678899999999999999999999987765 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.5   1.8e-05     0.035       2      34 .]      79     111 ..      78     111 .. 0.95

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.8e-05
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALelnPnn 34 
                 ++ly ++++ +k ++y+e   y +  L  +P+n
  EPX73999.1  79 ETLYYIALTQYKIKQYEESRRYLNMLLAKDPSN 111
                 689***************************997 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.1   2.4e-05     0.048      35      72 ..      84     121 ..      45     122 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 2.4e-05
       TPR_9  35 RGlllaqlGclsaAladLeaylalapdapdaeairaqL 72 
                  +l +++  ++++ ++ L+  la++p++p+a +++++L
  EPX73999.1  84 IALTQYKIKQYEESRRYLNMLLAKDPSNPQALRLKSLL 121
                 689999*****************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       751  (0.0418874); expected 358.6 (0.02)
Passed bias filter:                      539  (0.030063); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1124.74
//
Query:       EPX74000.1  [L=370]
Description: actin cortical patch component End3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.4e-42  141.4   0.0    5.1e-39  132.4   0.0    2.3  2  EF-hand_4       Cytoskeletal-regulatory complex EF hand
    9.3e-33  114.1   3.8    6.9e-32  111.2   3.8    2.0  1  End3            Actin cytoskeleton-regulatory complex protein
    1.5e-06   28.5   0.2    0.00023   21.5   0.1    2.6  2  EF-hand_7       EF-hand domain pair
      1e-05   24.7   1.4    0.00021   20.6   1.6    2.6  2  EF-hand_1       EF hand
     0.0024   17.6   0.7      0.039   13.9   0.7    2.6  2  EF-hand_6       EF-hand domain
     0.0051   16.6   0.4       0.01   15.7   0.4    1.5  1  EF-hand_8       EF-hand domain pair
     0.0083   16.1   3.5        0.4   10.7   1.2    2.2  2  Prefoldin_2     Prefoldin subunit
  ------ inclusion threshold ------
      0.014   15.7   0.2        3.7    7.9   0.2    2.2  2  DUF641          Plant protein of unknown function (DUF641)
      0.016   14.8   0.6       0.28   10.8   0.1    2.2  2  TPD52           Tumour protein D52 family
      0.024   14.8   0.4        7.7    6.9   0.0    2.5  2  ABC_tran_CTD    ABC transporter C-terminal domain
       0.09   12.6   1.4        8.6    6.2   0.0    2.4  2  DivIC           Septum formation initiator
       0.13   12.5   3.5        5.1    7.4   0.1    2.4  2  Spc24           Spc24 subunit of Ndc80
       0.16   12.1   1.4        1.2    9.3   0.7    2.2  2  BRE1            BRE1 E3 ubiquitin ligase
       0.25   10.5   6.0        0.9    8.7   3.0    2.0  2  DUF2046         Uncharacterized conserved protein H4 (DUF2046
       0.33   10.2   1.9       0.66    9.2   1.9    1.4  1  CorA            CorA-like Mg2+ transporter protein
       0.38   11.1   2.6        8.6    6.7   0.0    2.6  2  Lzipper-MIP1    Leucine-zipper of ternary complex factor MIP1
       0.44   11.0   3.6         12    6.4   0.1    2.4  2  FlaC_arch       Flagella accessory protein C (FlaC)
       0.59   10.5   2.7         37    4.8   1.0    2.4  2  Csm1_N          Csm1 N-terminal domain
        1.4    8.7   4.7        8.3    6.3   0.8    2.6  2  TRAF_BIRC3_bd   TNF receptor-associated factor BIRC3 binding 
        2.7    8.5   5.8        5.1    7.6   0.4    2.6  2  Cep57_MT_bd     Centrosome microtubule-binding domain of Cep5
        5.3    7.1   7.6        1.7    8.6   2.5    2.5  2  Pox_A_type_inc  Viral A-type inclusion protein repeat


Domain annotation for each model (and alignments):
>> EF-hand_4  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.4   0.0     6e-42   5.1e-39       6     103 ..       3     100 ..       1     101 [. 0.97
   2 !    6.7   0.0    0.0079       6.7      11      91 ..     139     217 ..     132     229 .. 0.79

  Alignments for each domain:
  == domain 1  score: 132.4 bits;  conditional E-value: 6e-42
   EF-hand_4   6 eleikkyweifsglkpednkltgdkvapvlknskleedklekiwdladidedgkldfeefciamrlifdlvngeikdvPselPewlvpeskahlvqan 103
                   e++k+weif++l+pe  +++g+k+ +vl++s+l+++kl+k+wdl did+dg+ldf+efciam++if+++ng ++dvPs++Pe lvp sk+hlv+a+
  EPX74000.1   3 PEEKNKFWEIFRSLRPEAGYISGEKAYGVLRSSRLDNEKLAKLWDLVDIDDDGNLDFDEFCIAMKIIFNIINGIYTDVPSSIPEELVPPSKEHLVAAR 100
                 6799*******************************************************************************************997 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0079
   EF-hand_4  11 kyweifsglkpednkltgdkvapvlknskleedklekiwdladidedgkldfeefciamrlifdlvngeikdvPselPewl 91 
                  y +++s+  ++   +  +  apv     ++ ++++k wd+ +    +++d ++  + ++++      +   +P+e+P  l
  EPX74000.1 139 SYSDVYSSHCDKYGAVLYNAFAPVYDHLGIPRSQIQKAWDMVNPQRSETIDKDQCLVFLHILTQR--SKGFRIPNEVPFGL 217
                 68899999999999999999**********************99999999999888877776543..33345666666555 PP

>> End3  Actin cytoskeleton-regulatory complex protein END3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.2   3.8   8.1e-35   6.9e-32       1     198 [.     189     363 ..     189     364 .. 0.81

  Alignments for each domain:
  == domain 1  score: 111.2 bits;  conditional E-value: 8.1e-35
        End3   1 dkDqaLvflHiLnqReeGiriPrevPasLratfekekidydlnserassasktaaksksetstgkkakfgdsylsrlGvgsksekgtdfsatkgtdwee 99 
                 dkDq+LvflHiL qR++G+riP+evP  Lra+f+k +idy+l+ +  s + +++++  s ++           + r +  s  e+ +d   +++ dwe 
  EPX74000.1 189 DKDQCLVFLHILTQRSKGFRIPNEVPFGLRASFKKGNIDYNLHANDPSRTMRESQSVGSPST-----------VRRPT--SDLEAPKD---VRDSDWEI 271
                 8*****************************************55333222233222222222...........33332..11133334...4499**** PP

        End3 100 vrLkreLaeLeeklekveeeaekrkekereessksalvkreleqLLkYKeeqlreleegegkskeknlksvkedietveeqVegLesylssrkeeLeqL 198
                 v L+ eL  Le++++++e+e+++    ++ ++ +s+lv+r+l + L+YK + l++l+ g+ +    + + v++++e++e+  ++L++ l+ +k+ + +L
  EPX74000.1 272 VGLRNELSTLESRIRSLEREVNE----SSLAKGRSDLVRRDLIKVLDYKTKVLTNLKAGRFH---PDYSMVERNLEKLEQHATTLQQQLEGKKRDIVNL 363
                 *******************9984....45557889*********************999866...699*************************988776 PP

>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.1   2.7e-07   0.00023      29      71 .]      33      67 ..       7      67 .. 0.77
   2 ?    4.5   0.0     0.058        50       2      35 ..     171     204 ..     170     245 .. 0.78

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 2.7e-07
   EF-hand_7 29 rkifqgagegsklsdeelellfkefDtdkdGvisfdEFlklyr 71
                r         s l+ e+l +l++ +D d+dG ++fdEF+ +++
  EPX74000.1 33 R--------SSRLDNEKLAKLWDLVDIDDDGNLDFDEFCIAMK 67
                3........34456689**********************9996 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.058
   EF-hand_7   2 eklkeaFkelDtdgdgyldkee.llrllrkifqga 35 
                 ++++ a+++    ++  +dk++ l  +l+++ q  
  EPX74000.1 171 SQIQKAWDMVNPQRSETIDKDQcLV-FLHILTQRS 204
                 799*******************777.998877653 PP

>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   1.6   2.5e-07   0.00021       2      27 ..      42      67 ..      41      69 .. 0.92
   2 ?    1.1   0.0      0.42   3.6e+02       2      26 ..     173     197 ..     172     200 .. 0.85

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 2.5e-07
                HHHHHHHHTTTSSSEEEHHHHHHHHH CS
   EF-hand_1  2 lkeiFrefDkDgdGkIdfeEfkellk 27
                l ++++++D D dG +df+Ef+ ++k
  EPX74000.1 42 LAKLWDLVDIDDDGNLDFDEFCIAMK 67
                6789********************98 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.42
                 HHHHHHHHTTTSSSEEEHHHHHHHH CS
   EF-hand_1   2 lkeiFrefDkDgdGkIdfeEfkell 26 
                 ++++++++   ++ +Id+++ + +l
  EPX74000.1 173 IQKAWDMVNPQRSETIDKDQCLVFL 197
                 78999999999******99877665 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.7   4.5e-05     0.039       2      27 ..      42      67 ..      41      69 .. 0.91
   2 ?    0.3   0.0         1   8.7e+02       2      26 ..     173     197 ..     172     200 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 4.5e-05
   EF-hand_6  2 lreaFklfDkdgdGkidaeElrkalr 27
                l ++++l D d+dG +d++E+  a++
  EPX74000.1 42 LAKLWDLVDIDDDGNLDFDEFCIAMK 67
                567899****************9997 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 1
   EF-hand_6   2 lreaFklfDkdgdGkidaeElrkal 26 
                 +++a+++    ++ +id++++  +l
  EPX74000.1 173 IQKAWDMVNPQRSETIDKDQCLVFL 197
                 67888888888999*****998766 PP

>> EF-hand_8  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.4   1.2e-05      0.01      32      53 ..      46      67 ..      30      68 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1.2e-05
   EF-hand_8 32 frefDtdgdGkisfeEFcvlle 53
                 +++D+d+dG ++f+EFc  ++
  EPX74000.1 46 WDLVDIDDDGNLDFDEFCIAMK 67
                5789**************8886 PP

>> Prefoldin_2  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.0     0.019        16      10      35 ..     274     299 ..     270     321 .. 0.83
   2 !   10.7   1.2   0.00046       0.4      66     100 ..     334     368 ..     332     370 .] 0.94

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.019
                  HHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Prefoldin_2  10 lqqqlqqlaqqikqletqlkelelvl 35 
                  l+++l+ l++ i++le++++e+ l++
   EPX74000.1 274 LRNELSTLESRIRSLEREVNESSLAK 299
                  78899999999999999999988887 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00046
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Prefoldin_2  66 eLeerketlekeiktlekqleklekeleelkeelq 100
                  ++e ++e+le++ +tl++qle +++++ +l+++l+
   EPX74000.1 334 MVERNLEKLEQHATTLQQQLEGKKRDIVNLENKLR 368
                  799****************************9997 PP

>> DUF641  Plant protein of unknown function (DUF641)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.0      0.02        17      94     127 ..     255     290 ..     216     291 .. 0.62
   2 ?    7.9   0.2    0.0043       3.7      85     116 ..     337     368 ..     306     370 .] 0.86

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.02
      DUF641  94 vkklea..elkakdseieeLkekLeeaeksnkklek 127
                 +++lea  +++  d ei  L+++L+++e++ ++le+
  EPX74000.1 255 TSDLEApkDVRDSDWEIVGLRNELSTLESRIRSLER 290
                 4556641167777889**************999997 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0043
      DUF641  85 sllktyeitvkkleaelkakdseieeLkekLe 116
                 + l+ +e ++  l+++l+ k+ +i +L++kL+
  EPX74000.1 337 RNLEKLEQHATTLQQQLEGKKRDIVNLENKLR 368
                 66888999**********************96 PP

>> TPD52  Tumour protein D52 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0      0.16   1.3e+02      42      64 ..     270     292 ..     253     322 .. 0.65
   2 ?   10.8   0.1   0.00032      0.28      32      64 ..     335     367 ..     330     369 .. 0.92

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.16
       TPD52  42 eivtLrqvLaakekhlaelkrkl 64 
                 eiv Lr+ L++ e ++  l r  
  EPX74000.1 270 EIVGLRNELSTLESRIRSLEREV 292
                 44444444444444444444433 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00032
       TPD52  32 LkseLakleeeivtLrqvLaakekhlaelkrkl 64 
                 ++++L kle++ +tL+q L  k++ +++l  kl
  EPX74000.1 335 VERNLEKLEQHATTLQQQLEGKKRDIVNLENKL 367
                 5689*************************9997 PP

>> ABC_tran_CTD  ABC transporter C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.0     0.009       7.7       7      26 ..     275     294 ..     271     305 .. 0.84
   2 ?    5.5   0.1     0.025        21      12      32 ..     334     354 ..     330     366 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.009
  ABC_tran_CTD   7 qreleeleaeIeaLEeeiae 26 
                   ++el +le++I +LE e  e
    EPX74000.1 275 RNELSTLESRIRSLEREVNE 294
                   67899999999999988765 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.025
  ABC_tran_CTD  12 eleaeIeaLEeeiaeleaela 32 
                    +e+ +e+LE+  ++l+++l+
    EPX74000.1 334 MVERNLEKLEQHATTLQQQLE 354
                   5789999********999997 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0      0.01       8.6      24      49 ..     269     294 ..     262     302 .. 0.87
   2 ?    4.8   0.4     0.029        24      18      45 ..     338     365 ..     330     369 .. 0.58

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.01
                 HHHHHHHHHHHHHHHHHHHHHHHHCC CS
       DivIC  24 qeiaalqaelaklkaeneeLeaevkd 49 
                  ei+ l +el +l  ++++Le+ev++
  EPX74000.1 269 WEIVGLRNELSTLESRIRSLEREVNE 294
                 589999******************97 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.029
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       DivIC  18 aykqlkqeiaalqaelaklkaeneeLea 45 
                 ++ +l+q  ++lq++l+ +k ++ +Le 
  EPX74000.1 338 NLEKLEQHATTLQQQLEGKKRDIVNLEN 365
                 4455666666666666666666666655 PP

>> Spc24  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.1     0.006       5.1       9      44 ..     260     298 ..     255     325 .. 0.72
   2 ?    5.5   0.6     0.024        20      10      40 ..     336     366 ..     331     369 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.006
       Spc24   9 iakelsdleselesleselaelkeeleeleeesee...k 44 
                 + k+++d + e+  l++el+ l+++++ le+e +e    
  EPX74000.1 260 APKDVRDSDWEIVGLRNELSTLESRIRSLEREVNEsslA 298
                 568889999999999999999999999999999884431 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.024
       Spc24  10 akelsdleselesleselaelkeeleeleee 40 
                   +l++le+ ++ l+++l+ +k+ + +le++
  EPX74000.1 336 ERNLEKLEQHATTLQQQLEGKKRDIVNLENK 366
                 5678899999999999999999999999886 PP

>> BRE1  BRE1 E3 ubiquitin ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.62   5.3e+02      23      41 ..     275     293 ..     265     298 .. 0.65
   2 ?    9.3   0.7    0.0014       1.2       3      33 ..     337     367 ..     335     369 .. 0.92

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.62
        BRE1  23 vkeltileekklrleaeka 41 
                  +el+ le+++  le e +
  EPX74000.1 275 RNELSTLESRIRSLEREVN 293
                 4555566666666655554 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.0014
        BRE1   3 kELvklekafeelseqlskkvkeltileekk 33 
                   L+kle+    l++ql+ k+ ++ +le+k+
  EPX74000.1 337 RNLEKLEQHATTLQQQLEGKKRDIVNLENKL 367
                 579*************************997 PP

>> DUF2046  Uncharacterized conserved protein H4 (DUF2046)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.1     0.074        63     203     252 ..     242     294 ..     230     301 .. 0.70
   2 ?    8.7   3.0    0.0011       0.9     116     173 ..     309     367 ..     301     369 .. 0.75

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.074
     DUF2046 203 dqpvsappsPrdlvsegdtaeklsah...ikalrkeverlrkqlkksqkehee 252
                 +q+v +p++ r  +s+ ++++++ +    i  lr+e+++l +++++ ++e +e
  EPX74000.1 242 SQSVGSPSTVRRPTSDLEAPKDVRDSdweIVGLRNELSTLESRIRSLEREVNE 294
                 56677777777777777777766654444778888888888888777776654 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0011
     DUF2046 116 lsqlrqekveleqtlek.eqevqvnklmrkiekleaevlakqtkleqlrrekvelentl 173
                 l ++ + k+++ ++l+  + +     + r +ekle+++++ q++le  +r+ v+len+l
  EPX74000.1 309 LIKVLDYKTKVLTNLKAgRFHPDYSMVERNLEKLEQHATTLQQQLEGKKRDIVNLENKL 367
                 555555566655555541334455567799***************************98 PP

>> CorA  CorA-like Mg2+ transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   1.9   0.00077      0.66     123     216 ..     274     354 ..     267     368 .. 0.69

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00077
        CorA 123 lfellekleeeldeledeledstkkeilrelaqlrrrlvklrralapnrevlkrllakaddkllddedkeylrdlldelerllemlealrerle 216
                 l+++l++le++++ le+e+++s+ ++ +++l++  r    l ++l ++++vl++l+a ++++         ++ ++ +le+l++++++l+++le
  EPX74000.1 274 LRNELSTLESRIRSLEREVNESSLAKGRSDLVR--R---DLIKVLDYKTKVLTNLKAGRFHPD--------YSMVERNLEKLEQHATTLQQQLE 354
                 678999*************************99..5...556678899999955555333333........44455555555555555555554 PP

>> Lzipper-MIP1  Leucine-zipper of ternary complex factor MIP1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.0      0.01       8.6      53      75 ..     271     293 ..     236     297 .. 0.62
   2 ?    3.1   0.7      0.13   1.1e+02      61      81 ..     333     353 ..     330     356 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.01
  Lzipper-MIP1  53 akellkeiallEeevvkLEqkll 75 
                   +  l+ e+++lE  +  LE++++
    EPX74000.1 271 IVGLRNELSTLESRIRSLEREVN 293
                   33456666666666666666665 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.13
  Lzipper-MIP1  61 allEeevvkLEqkllsLyrkl 81 
                   +++E    kLEq+  +L+++l
    EPX74000.1 333 SMVERNLEKLEQHATTLQQQL 353
                   588999999999999999987 PP

>> FlaC_arch  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.1     0.014        12       5      25 ..     274     294 ..     259     312 .. 0.70
   2 ?    4.5   1.0     0.055        47       5      35 ..     335     365 ..     333     368 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.014
   FlaC_arch   5 lEnklsklsteletvkkenee 25 
                 l n+ls l++++ ++++e +e
  EPX74000.1 274 LRNELSTLESRIRSLEREVNE 294
                 445666666666666666555 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.055
   FlaC_arch   5 lEnklsklsteletvkkeneelsksveelke 35 
                 +E  l+kl+   +t+++++e  + ++ +l+ 
  EPX74000.1 335 VERNLEKLEQHATTLQQQLEGKKRDIVNLEN 365
                 79999*************9999998888876 PP

>> Csm1_N  Csm1 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0     0.043        37      36      65 ..     264     293 ..     261     297 .. 0.77
   2 ?    4.8   1.0     0.043        37      24      50 ..     341     367 ..     333     369 .. 0.65

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.043
      Csm1_N  36 letkdqeiesLkeqlaeleekvkeleerrk 65 
                 ++  d ei  L+++l +le+++++le + +
  EPX74000.1 264 VRDSDWEIVGLRNELSTLESRIRSLEREVN 293
                 566778999999999999999998887655 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.043
      Csm1_N  24 klvhENsvLsqkletkdqeiesLkeql 50 
                 kl +  ++L+q+le k++ i +L+++l
  EPX74000.1 341 KLEQHATTLQQQLEGKKRDIVNLENKL 367
                 444555677777777777777777765 PP

>> TRAF_BIRC3_bd  TNF receptor-associated factor BIRC3 binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.1      0.14   1.2e+02      47      62 ..     277     292 ..     273     293 .. 0.80
   2 ?    6.3   0.8    0.0097       8.3      21      56 ..     333     368 ..     310     369 .. 0.90

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.14
  TRAF_BIRC3_bd  47 kieaLekKvrqLerti 62 
                       +Le ++r+Ler +
     EPX74000.1 277 ELSTLESRIRSLEREV 292
                    5678999999999975 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0097
  TRAF_BIRC3_bd  21 sVLnrEverssttieaverqrrldqekieaLekKvr 56 
                    s  +r  e+ +  +  +++q +  ++ i  Le+K+r
     EPX74000.1 333 SMVERNLEKLEQHATTLQQQLEGKKRDIVNLENKLR 368
                    5678999***************************87 PP

>> Cep57_MT_bd  Centrosome microtubule-binding domain of Cep57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.2      0.12   1.1e+02      18      55 ..     272     311 ..     271     325 .. 0.68
   2 ?    7.6   0.4     0.006       5.1      42      75 ..     331     364 ..     317     365 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.12
  Cep57_MT_bd  18 keLedEfehlklelqelaaqynaldpslgkrk..RkdLae 55 
                   +L +E++ l  +   l+++ n++  + g++   R+dL +
   EPX74000.1 272 VGLRNELSTLESRIRSLEREVNESSLAKGRSDlvRRDLIK 311
                  5789999999999999999999988555443222555544 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.006
  Cep57_MT_bd  42 dpslgkrkRkdLaeeleelvkrlEaKadqIykLy 75 
                  d s+ +r  ++L+++   l+++lE K+  I +L 
   EPX74000.1 331 DYSMVERNLEKLEQHATTLQQQLEGKKRDIVNLE 364
                  6677788889********************9985 PP

>> Pox_A_type_inc  Viral A-type inclusion protein repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   2.5     0.002       1.7       2      19 ..     277     294 ..     276     295 .. 0.89
   2 ?    0.2   0.2      0.95   8.1e+02       6      17 ..     356     367 ..     352     368 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.002
  Pox_A_type_inc   2 EmsrlRsRIsDLErqLse 19 
                     E+s l sRI++LEr+ +e
      EPX74000.1 277 ELSTLESRIRSLEREVNE 294
                     899999********9765 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.95
  Pox_A_type_inc   6 lRsRIsDLErqL 17 
                     +++ I+ LE++L
      EPX74000.1 356 KKRDIVNLENKL 367
                     577799****99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (370 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       821  (0.0457917); expected 358.6 (0.02)
Passed bias filter:                      685  (0.0382063); expected 358.6 (0.02)
Passed Vit filter:                       100  (0.00557756); expected 17.9 (0.001)
Passed Fwd filter:                        21  (0.00117129); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              21  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 2600.11
//
Query:       EPX74001.1  [L=245]
Description: ribosome assembly protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.9e-21   75.9   0.0    3.1e-21   75.1   0.0    1.4  1  RL10P_insert   Insertion domain in 60S ribosomal protein L10P
    2.2e-19   69.4   0.0    3.9e-19   68.7   0.0    1.4  1  Ribosomal_L10  Ribosomal protein L10


Domain annotation for each model (and alignments):
>> RL10P_insert  Insertion domain in 60S ribosomal protein L10P
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.1   0.0   3.4e-25   3.1e-21       1      71 []     125     207 ..     125     207 .. 0.99

  Alignments for each domain:
  == domain 1  score: 75.1 bits;  conditional E-value: 3.4e-25
  RL10P_insert   1 AraGtiAtedviipagplela............PgsiepeLrklglptklkkGkivleedylvckkGetltseqaqlLklLgi 71 
                   AraG++A+ + +ipagp++++            ++++ep+ r++g+pt lk+G+++l +d+++c++G++l+s+q++lLkl+gi
    EPX74001.1 125 ARAGSVAPFTLVIPAGPVYSRagqipaeddiplAHTLEPQVRQMGMPTILKNGVVTLLADFTLCTEGQELDSRQTRLLKLFGI 207
                   9*********************************************************************************9 PP

>> Ribosomal_L10  Ribosomal protein L10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.7   0.0   4.3e-23   3.9e-19       3      98 ..      20     119 ..      18     121 .. 0.95

  Alignments for each domain:
  == domain 1  score: 68.7 bits;  conditional E-value: 4.3e-23
                    CCCHCCCCCCCCCCCTTSSEEEEEE-TTS-HHHHHHCCCHHHHHGCEEEEESCCCCCCCCHCCTSS.S......SCGCCSSSEEEEEESS-TCHHH CS
  Ribosomal_L10   3 kekKeelvkelkellkkyksvvvvdyegltvaqlqelRkklrengaelkvvKntlmrrAleetgeeek......lkellkgpvalvftnedpvala 92 
                    +e K+ l+  ++e+l+k++ ++v+d+++++++ l+ +R +++++  ++ ++K ++m +Al+ t+eee+      l++ll+g+v+l+ftn++p ++ 
     EPX74001.1  20 HEGKAMLFGGIQESLDKFDFMWVFDVANMRNTYLKRVRDDWKDS--RIYMGKTKVMGKALGYTAEEEHaenvsqLSKLLHGTVGLLFTNNKPEDVT 113
                    689999************************************65..*******************974589999********************** PP

                    HCCCCC CS
  Ribosomal_L10  93 kvleef 98 
                     ++e+f
     EPX74001.1 114 GYFESF 119
                    ***999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       389  (0.0216967); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1848.43
//
Query:       EPX74002.1  [L=138]
Description: TRAPP complex subunit Trs20 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      2e-49  167.0   0.4    2.3e-49  166.9   0.4    1.0  1  Sedlin_N        Sedlin, N-terminal conserved region
    1.3e-10   41.4   0.1    6.4e-10   39.1   0.2    1.8  2  Sybindin        Sybindin-like family
  ------ inclusion threshold ------
      0.049   14.2   0.0      0.075   13.6   0.0    1.3  1  RNA_pol_Rpb5_N  RNA polymerase Rpb5, N-terminal domain


Domain annotation for each model (and alignments):
>> Sedlin_N  Sedlin, N-terminal conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.9   0.4   3.8e-53   2.3e-49       1     131 []       9     136 ..       9     136 .. 0.98

  Alignments for each domain:
  == domain 1  score: 166.9 bits;  conditional E-value: 3.8e-53
    Sedlin_N   1 iigkkdnplyelefssskekeeke.lkeLnqfilhasLDivedlqwktnnlylgkvdkfeklsvsayvtnskikflllhesssskkkdekikqffqevh 98 
                 iig+kdnp+yele+   +ek++k+   +Lnqfi+hasLDive+ qw++n ly++++d+f++l+vsay+t+s++kf+llh+    +++++ ik ffqe+h
  EPX74002.1   9 IIGTKDNPVYELEIGGGSEKQDKSlGAHLNQFIVHASLDIVEQVQWTSNALYVRSIDQFHELYVSAYITPSNMKFMLLHH----PQSSDGIKIFFQEIH 103
                 9***************99999888789*****************************************************....9************** PP

    Sedlin_N  99 elyvktlmnPFykvneeirSpaFdkkvkklakk 131
                 ely+kt+mnPFy++ne+i+S+aFd +v++la+k
  EPX74002.1 104 ELYIKTVMNPFYQPNESIKSQAFDLQVRSLARK 136
                 ******************************997 PP

>> Sybindin  Sybindin-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.0      0.12   7.4e+02     118     141 ..      15      38 ..       6      40 .. 0.83
   2 !   39.1   0.2   1.1e-13   6.4e-10      77     141 ..      72     135 ..      42     137 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.12
    Sybindin 118 nPfyslempircelFdeklkelle 141
                 nP+y+le    +e+ d+ l   l+
  EPX74002.1  15 NPVYELEIGGGSEKQDKSLGAHLN 38 
                 9******99999998888877665 PP

  == domain 2  score: 39.1 bits;  conditional E-value: 1.1e-13
    Sybindin  77 LhclqtltGiKfvlitdtktnaeadsllrkiyelYsdyvlknPfyslempircelFdeklkelle 141
                 ++ + t++ +Kf+l++++++++ ++++ + i elY   v+ nPfy+++  i+++ Fd ++++l +
  EPX74002.1  72 VSAYITPSNMKFMLLHHPQSSDGIKIFFQEIHELYIKTVM-NPFYQPNESIKSQAFDLQVRSLAR 135
                 567889*******************************988.9****************9998866 PP

>> RNA_pol_Rpb5_N  RNA polymerase Rpb5, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.3e-05     0.075      32      82 ..      62     110 ..      56     116 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.3e-05
                     --CHHHHCCSB-SSSSB-GCCT-EEEESS.SS--EEEEEE-SSTTE-TCCC CS
  RNA_pol_Rpb5_N  32 isleeFkekygdepkevdrekltisaskkddpseqilVfFpeekkvgvkti 82 
                      s+++F e y++    +  ++++++  +++++s+ i +fF e  ++ +kt+
      EPX74002.1  62 RSIDQFHELYVSA--YITPSNMKFMLLHHPQSSDGIKIFFQEIHELYIKTV 110
                     5889******995..789****************************99997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       320  (0.0178482); expected 358.6 (0.02)
Passed bias filter:                      225  (0.0125495); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.36u 0.25s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 1059.15
//
Query:       EPX74003.1  [L=248]
Description: DNA-directed RNA polymerase I complex subunit Rpa34 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.5e-17   63.7  12.5    2.5e-17   63.7  12.5    2.0  2  RNA_polI_A34    DNA-directed RNA polymerase I subunit RPA34.5
  ------ inclusion threshold ------
        8.6    6.1  21.5        2.3    8.0  12.1    2.1  2  RR_TM4-6        Ryanodine Receptor TM 4-6


Domain annotation for each model (and alignments):
>> RNA_polI_A34  DNA-directed RNA polymerase I subunit RPA34.5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   4.4      0.12   1.1e+03     155     184 ..      15      48 ..       2      71 .. 0.35
   2 !   63.7  12.5   2.8e-21   2.5e-17       3     181 ..      75     247 ..      73     248 .] 0.85

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.12
                   XXXXXXXXXX......XXXXXXXXXXXXXXXXXXX CS
  RNA_polI_A34 155 kkkkkaaeede.....eeeapkkkkkkkkkkkekk 184
                   ++++ ++ e+        +  k +kk ++ +k+ +
    EPX74003.1  15 EESEVSSAEEVsshspDVSGGKNSKKGNQ-TKSSE 48 
                   11111111111111111111111222111.11111 PP

  == domain 2  score: 63.7 bits;  conditional E-value: 2.8e-21
                   TEEEEEEEEETTS-GGG-S..EE---SSCSEEEE.EETTEEEEEEEGGGCS-GTTEEEEEE-SSSTB-TTSS-B-SEEEEEEE--XXXXXXXXXX.. CS
  RNA_polI_A34   3 gkelWlIkaPasvpikslegvevplsgvqtgksvlshkgqdYgiledsdeeekggerlLlpdkkkdgyelaakpisrtlnisevvqlpstdaepaas 99 
                   +  ++l + P ++ ++++    ++l g+ +  +  s   ++++i+++s     g+ rl++pd+k++  ++ a +i   + +se++++   +++++ +
    EPX74003.1  75 ESGVFLVRLPPDMALEDIT--DLNLGGKPSIAAN-SSTAESFQIRQESL----GSVRLFVPDEKGS--YS-ASEIRTGYVVSETPRIVLNGSSKEND 161
                   56699**************..9***998888877.8899********77....9**********65..33.369**************999888888 PP

                   ...XXXXXXXXXXXXXXXXXXXXXXXX...XXXXX............XXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXX CS
  RNA_polI_A34 100 ...vvpkpprpqpkgLkmRFkPfGsgd...gppgtigssseesegekekkkkpkakkkekkkkkkkaaeedeeeeapkkkkkkkkkkk 181
                        +    pq+k+Lk+ F+P+G+     ++++t++s s+++  e++k + p++kk +++kk+k++++++  ++++kk+kk++kk+k
    EPX74003.1 162 qttDNADGKIPQVKNLKQHFRPIGAVYttsSTEKTVPSTSAAEPTEEQKEERPESKKRSRDKKEKGNEDKE--KDKKKKHKKSSKKEK 247
                   865666669***************88877889999999999999999999999999999999999999999..666666666666555 PP

>> RR_TM4-6  Ryanodine Receptor TM 4-6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   1.8    0.0047        42      25      80 ..      10      65 ..       2      77 .. 0.71
   2 ?    8.0  12.1   0.00026       2.3      84     140 ..     190     245 ..     131     248 .] 0.50

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.0047
                XXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXX CS
    RR_TM4-6 25 esleedlaeaageeeeedllsdvfgldlkkeggqykvvakkseagLgDlseteaee 80
                ++ +e+ +e+ ++ee +    dv g ++ k+g+q+k  + + +++L D    e e 
  EPX74003.1 10 DHSSEEESEVSSAEEVSSHSPDVSGGKNSKKGNQTKSSEADDSNSLNDYVRAEGEP 65
                33344444556667777777888899999999999999999999999988777665 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.00026
                 XXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXX..........XXX CS
    RR_TM4-6  84 pelkkklaeeeeaeeekeeeeepeaeaeekadaengekeekekekeeeekeseeeee 140
                 ++  +k+  +++a+e +ee++e+++e+ +k++++++ek +++kek++++k+++ +++
  EPX74003.1 190 TSSTEKTVPSTSAAEPTEEQKEERPES-KKRSRDKKEKGNEDKEKDKKKKHKKSSKK 245
                 222333333344444444444444444.44444444444444332222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2054  (0.114563); expected 358.6 (0.02)
Passed bias filter:                      585  (0.0326287); expected 358.6 (0.02)
Passed Vit filter:                       131  (0.0073066); expected 17.9 (0.001)
Passed Fwd filter:                        34  (0.00189637); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.27s 00:00:00.92 Elapsed: 00:00:00.43
# Mc/sec: 1745.31
//
Query:       EPX74004.1  [L=84]
Description: Sm snRNP core protein Sme1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.5e-17   61.0   0.3    7.6e-17   60.8   0.3    1.1  1  LSM       LSM domain
    0.00057   19.5   0.1    0.00086   18.9   0.1    1.3  1  Hfq       Hfq protein


Domain annotation for each model (and alignments):
>> LSM  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.8   0.3   8.5e-21   7.6e-17       2      66 ..      19      82 ..      18      83 .. 0.96

  Alignments for each domain:
  == domain 1  score: 60.8 bits;  conditional E-value: 8.5e-21
                HHHHTTTSEEEEEETTSEEEEEEEEEEETTSEEEEEEEEEEETTETEEEEEEEEEEEGGGEEEEE CS
         LSM  2 flkklinkkvtvelkngrelrGtLkgfDqfmNlvLedveetlkdkkekrklglvliRGnnivlis 66
                +l++++  ++++  + + +++G+++gfD+fmN++L+d++ +++++ + r +g++l++G+ni+li 
  EPX74004.1 19 LLQQHTPVEIWLFEQVDLRIEGQIRGFDEFMNIILDDAVQIDTKQ-NRREIGRILLKGDNITLIR 82
                78999999************************************9.*****************95 PP

>> Hfq  Hfq protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.1   9.6e-08   0.00086       8      44 ..      18      56 ..      14      63 .. 0.77

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 9.6e-08
                HHHHCT-EEEEEETTS-..EEEEEEEEE-SSEEEEEETT CS
         Hfq  8 qlrkekipvtifLvnGi..klkGviksfDnftvlLesdg 44
                +l ++++pv i+L   +  +++G+i++fD+f+ ++ +d+
  EPX74004.1 18 KLLQQHTPVEIWLFEQVdlRIEGQIRGFDEFMNIILDDA 56
                567899*******997633779*********95554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       255  (0.0142228); expected 358.6 (0.02)
Passed bias filter:                      222  (0.0123822); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.36s 00:00:00.83 Elapsed: 00:00:00.54
# Mc/sec: 470.28
//
Query:       EPX74005.1  [L=956]
Description: karyopherin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-27   95.0   3.6    5.8e-27   94.6   0.2    3.1  3  Xpo1      Exportin 1-like protein
    7.7e-13   48.2   0.4    5.5e-12   45.4   0.3    2.4  2  IBN_N     Importin-beta N-terminal domain
  ------ inclusion threshold ------
       0.58   10.5   2.8        1.6    9.0   0.0    2.9  3  FANCI_S2  FANCI solenoid 2


Domain annotation for each model (and alignments):
>> Xpo1  Exportin 1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.2   0.0       2.6   1.6e+04     130     138 ..      38      46 ..      15      62 .. 0.55
   2 !   94.6   0.2   9.7e-31   5.8e-27       4     149 .]      98     243 ..      95     243 .. 0.96
   3 ?   -0.6   0.1       0.2   1.2e+03      41      41 ..     801     801 ..     738     925 .. 0.57

  Alignments for each domain:
  == domain 1  score: -4.2 bits;  conditional E-value: 2.6
                 HHHHHHCCS CS
        Xpo1 130 nllfqlLsd 138
                 +++fq+L+ 
  EPX74005.1  38 QICFQILNT 46 
                 333333322 PP

  == domain 2  score: 94.6 bits;  conditional E-value: 9.7e-31
                 HHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHHCT.HHHHHHHHHHHHHHHHHHHTSHTTTSCHHH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC.HH CS
        Xpo1   4 lrnklaealaelflqeypnnWpsffddllsllssspsglelllriLkvlpeEiadfsrskleqer.rndlkdllrsnvqkilelllqileqsqskk.qs 100
                 l+  +a+++a+++l++   +W+++++d+++++s+++ +  ++l++L+vlpeE ad ++++l+ e+   ++ +llr+n +++lelllq+++++  ++ +s
  EPX74005.1  98 LLISFAVCMAAIALHM--TEWHNVINDVFQACSTHDPTGRCILQFLSVLPEEAADPRKTSLTWEElCARIDELLRDNGPAVLELLLQYVNSNIYADgTS 194
                 5667899*********..*****************99999****************************************************9999999 PP

                 HHHHHHHHHHHHHHTTTS-HHHHHTSCHHHHHHHHCCSCCCHHHHHHHH CS
        Xpo1 101 selveavLkclsswvswidiglivnnpllnllfqlLsdpelreaavecL 149
                 s  ++ vL  l+sw+++i++++i+++pl++l+f+ L++++l + ave+L
  EPX74005.1 195 SVDLNLVLTSLTSWLREIPLDKILSSPLIELAFRSLDNDMLIDDAVEFL 243
                 **********************************************997 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.2
                 H CS
        Xpo1  41 g 41 
                 +
  EPX74005.1 801 Q 801
                 1 PP

>> IBN_N  Importin-beta N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.4   0.3   9.2e-16   5.5e-12       1      73 [.      23      89 ..      23      90 .. 0.95
   2 ?   -1.1   0.0       0.3   1.8e+03      29      43 ..     525     539 ..     503     547 .. 0.79

  Alignments for each domain:
  == domain 1  score: 45.4 bits;  conditional E-value: 9.2e-16
                HHHHHHHHHCSTCHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHHHHGGSCCCHCGSXHHHHHHHHHHHHHHHH CS
       IBN_N  1 AekqLkqlekqpgflsallqilanseselevRqlAalyLknlitkhWsdeeekqslpseekeqIrnnllnllg 73
                A+  L++++k+ ++++ ++qil +++s++e++++Aa++L+++i + ++      +lp+++++++r++  +l++
  EPX74005.1 23 ANSYLEEFQKSATAWQICFQILNTGDSSIESKLFAAQTLRQKIVYDFH------QLPKSVHAELRDSMMQLFI 89
                6779********************************************......************9888765 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.3
                 HHHHHHHHHHHHHHH CS
       IBN_N  29 levRqlAalyLknli 43 
                  ev+ +Aa+ +k+++
  EPX74005.1 525 KEVQSAAAQAMKHFC 539
                 499*********987 PP

>> FANCI_S2  FANCI solenoid 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1      0.29   1.8e+03      35     126 ..      52     141 ..      23     146 .. 0.75
   2 ?    9.0   0.0   0.00027       1.6      73     151 ..     529     607 ..     517     612 .. 0.82
   3 ?   -2.2   0.1      0.78   4.7e+03      72     111 ..     774     812 ..     741     819 .. 0.66

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.29
    FANCI_S2  35 ktvaqaaaklgsqiLlelfkvhesarseiieqllsriitkseeevsqyiklLselvksapltllesssklkelldylsflpletatallkAl 126
                 + +  aa++l ++i+  + +  +s+  e+ + +++  i++++++  + +  ++  +++  l++ e  + ++++++ +s  +  t++ +l++l
  EPX74005.1  52 ESKLFAAQTLRQKIVYDFHQLPKSVHAELRDSMMQLFISSKDSP-RPLLISFAVCMAAIALHMTEWHNVINDVFQACST-HDPTGRCILQFL 141
                 55556677788888888888888888888888888888887775.8888888888889999999999999999999854.455666666665 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00027
    FANCI_S2  73 tkseeevsqy.iklLselvksapltllesssklkelldylsflpletatallkAllPLlkvseslrdalilvLRKalfsr 151
                 +++++ ++++ +++  +lv++ p  l ++  +++e+ld  s+l+ + + a ++A++P+ ++ +sl+  +   L+K + s+
  EPX74005.1 529 SAAAQAMKHFcSDCREHLVNHLPQ-LHSFYLSMREVLDPQSILEIAEGLAHIAAIQPITNTYQSLHSFIAPSLQKIVLSQ 607
                 555555555425788888888775.678999**************************************99999998876 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 0.78
    FANCI_S2  72 itkseeevsqyiklLselvksapltllesssk.lkelldyl 111
                 +++ +     +++lL  l+++  + l+ ++++ l  +l yl
  EPX74005.1 774 LANPQR--VFMSDLLEPLIHASLVCLQVNQDEsLCSVLVYL 812
                 334333..334678888888888777776666677777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (956 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       614  (0.0342462); expected 358.6 (0.02)
Passed bias filter:                      500  (0.0278878); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.67u 0.33s 00:00:01.00 Elapsed: 00:00:00.55
# Mc/sec: 5218.47
//
Query:       EPX74006.1  [L=675]
Description: long-chain-fatty-acid-CoA ligase Lcf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-95  320.7   0.0    1.5e-95  320.3   0.0    1.1  1  AMP-binding    AMP-binding enzyme
  ------ inclusion threshold ------
      0.013   15.1   0.1        1.5    8.5   0.0    3.1  3  MRP-S34        Mitochondrial 28S ribosomal protein S34
       0.02   15.9   0.1      0.059   14.4   0.1    1.9  1  AMP-binding_C  AMP-binding enzyme C-terminal domain


Domain annotation for each model (and alignments):
>> AMP-binding  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  320.3   0.0   2.5e-99   1.5e-95      11     422 ..      85     539 ..      75     540 .. 0.86

  Alignments for each domain:
  == domain 1  score: 320.3 bits;  conditional E-value: 2.5e-99
                  SEEEEECCSTEEEEHHHHHHHHHHHHHHHHHTTSSTT-EEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS-HHHHHHHHHHHTESEEEETCTCCCHH CS
  AMP-binding  11 kvalvdsgegqtlTYreldervnrlAagLrslGvkkgdrVaillpnspewvvallailkaGavvvplnptltaeelayiledseakvliatvdselle 108
                  k  +    +++ l+++++++++ rlA gLr+ G+k gd+  +++ +++ w+++++a+++ ++ +v+ + tl++e l + l+++++ ++   ++++ll+
   EPX74006.1  85 KWSYFELSDYKYLSFNQFYDKTMRLAGGLRKFGLKAGDKLELYASTTASWFIMAHAAMSQSMSIVTAYETLGEEGLLHSLRETDVHAIY--TEANLLK 180
                  5544334479*******************************************************************************..9999977 PP

                  HHHHHHSCC-EECEEEEESCCS-HCCHCCCHCCCCSCTTS..........-TSCCCS-BTTSEEEEEEE--SSSS-EEEEEEHHHHHHHHHHHHHHHC CS
  AMP-binding 109 klleaaakleavklvivldadellkeeelkeeeeseekae..........kpeeeeelkpddlayiiYTSGTTGkPKGVmlshrnlvanvaslkletr 196
                  +l +  +   +v l +++++++++ e+ +  +++ ++ +           +p ++e+++p+dl++ +YTSG+TG PKGV l+h+n+va v+ + ++  
   EPX74006.1 181 SLVNPLK---EVNLHYIVYRGKAKPEDVEALKQSRSDIKLisyeelesysEPATPEPPSPEDLCCTMYTSGSTGLPKGVLLTHKNMVALVTGI-CKVI 274
                  7766554...5777888888887777665555555555425678899999888999************************************8.6767 PP

                  SCCTTT-EEEESS-TTSCHHHHHHHHHHHHTT-EEEE-TTCGCCH..HHHHHHHHHHHT-SEEEEEHHHHHHH.............HHCCCHHC.... CS
  AMP-binding 197 fklkeddvvlsilplahifglilelllallsGatvvllpkdaald..pklllelieklkvtviagvPrvleal.............lesgalka.... 275
                   +++++d +l++lplahi+++ ++++l+l++G+t++++   + +d   + ++++i  +k+t+++gvP+v+e++             +     k+    
   EPX74006.1 275 PEVTSKDYLLAYLPLAHILEF-AFENLCLAWGGTIGYAGVRTLTDtnCRNCHGDILSFKPTIMVGVPAVWEMVrkgitsklgaassV-----KKsvfw 366
                  88999***************9.***************98777777678899**********************88876665532221.....112333 PP

                  .HHHHC..........................CGTT-SEEEEESS-EBHHHHHHHHHHHTCEEEEEEEEGGGSSECEECHCTTTCTSTTS-BEE-TTE CS
  AMP-binding 276 .akkak..........................dlsslrlvllggeplspellrffralfgeevlegYGlTEttgvvtvlpleedkkklgsvGkplpgv 346
                   a++ak                            ++lr+vl+gg++lsp++ +f++ ++++ vl gYGlTE +++++ ++++   +   s+G +lp++
   EPX74006.1 367 aAYHAKlrmmrhgipgssfldaaifnkirsagTGGRLRYVLSGGSALSPDTKQFLSVVLCP-VLIGYGLTEVSAAAM-IETPSTFNIDDSAGVILPCT 462
                  344444888888888888888888888887744445**********************976.**************9.66677778999********* PP

                  EEEEE-TTTSCBEETTSE..EEEEEEETTS-SEBTT-HHHHHHHEEETCCEEEEEEEEEEETTSEEEEEEECCCEEEE CS
  AMP-binding 347 evkivDeetgepvpdgee..GellvrgpgvmkgYlkkpeataeafdsegrwlrTGDlgrldedGyleivgRkkdlikl 422
                  e+k++D+e+g +  + ++  Ge+l+rgp++++gYl+++++++e+f  e++w+ TGD+g+l++ G l+i++Rkk+l+k+
   EPX74006.1 463 EMKLIDCEEGSYYTNANPprGEILLRGPSLTQGYLNREKENKESFS-EDGWFMTGDVGELTPHGLLRIIDRKKNLVKT 539
                  *************9888889*************************8.867**************************98 PP

>> MRP-S34  Mitochondrial 28S ribosomal protein S34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.1     0.026   1.6e+02      80     112 ..      59      92 ..      44     106 .. 0.79
   2 ?    8.5   0.0   0.00025       1.5      58     101 ..     194     237 ..     174     246 .. 0.85
   3 ?   -0.3   0.0      0.13   7.6e+02      10      48 ..     520     558 ..     518     570 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.026
     MRP-S34  80 r.LvpkheeeeflekakpkepeklprtvplPPLl 112
                 r L+++h ee++++k+ ++e++++p++ ++  L 
  EPX74006.1  59 RdLIKEHVEEKMITKVVNNEKKEVPKKWSYFELS 92 
                 449***********88888888899999887775 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.00025
     MRP-S34  58 ktfrGknegkvkeisktnkadwrLvpkheeeeflekakpkepek 101
                  ++rGk +++ +e  k  ++d +L++ +e e++ e a+p+ p++
  EPX74006.1 194 IVYRGKAKPEDVEALKQSRSDIKLISYEELESYSEPATPEPPSP 237
                 589********************************887775544 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.13
     MRP-S34  10 nlknfGvGrlvtrkswlqrydePcYlritkvepdmsaen 48 
                 +l  +G+ r++ rk+ l + ++  Y+ + k e  + +++
  EPX74006.1 520 ELTPHGLLRIIDRKKNLVKTQNGEYIALEKLESRYRSSS 558
                 67788999*********999***********99998876 PP

>> AMP-binding_C  AMP-binding enzyme C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.1   9.9e-06     0.059       1      39 [.     549     585 ..     549     624 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 9.9e-06
                    HHHHHHHSSTTEEEEEEE-----TTS---EEEEEE---.- CS
  AMP-binding_C   1 evEsalvshpaVaeaaVvGvpdevkGealvafVvlkdg.s 39 
                    ++Es + s+  Va+++V++++ +     ++a++v+++  +
     EPX74006.1 549 KLESRYRSSSLVANICVYADQSK---VKPIAIIVPNEAaV 585
                    589********************...899******43221 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (675 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       716  (0.0399353); expected 358.6 (0.02)
Passed bias filter:                      615  (0.034302); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.30s 00:00:00.96 Elapsed: 00:00:00.47
# Mc/sec: 4317.78
//
Query:       EPX74007.1  [L=280]
Description: translation initiation factor eIF3g [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.7e-42  144.8   2.6    2.6e-42  144.1   2.6    1.3  1  eIF3g         Eukaryotic translation initiation factor 3 subu
    9.5e-18   63.8   0.0    1.9e-17   62.8   0.0    1.6  1  RRM_1         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
  ------ inclusion threshold ------
      0.047   13.5   0.0       0.13   12.2   0.0    1.7  1  RRM_occluded  Occluded RNA-recognition motif


Domain annotation for each model (and alignments):
>> eIF3g  Eukaryotic translation initiation factor 3 subunit G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.1   2.6   4.4e-46   2.6e-42       3     124 ..      22     147 ..      20     148 .. 0.91

  Alignments for each domain:
  == domain 1  score: 144.1 bits;  conditional E-value: 4.4e-46
       eIF3g   3 eiiededgiktvieykinedgkkvkvtrkiretkvkekvskavaeRkkwaKfGdekgdkpgpnsatttvgeevelkl....eeekeeekeeeekekakl 97 
                 ++++++dg+kt+ie++++++gkkvkvtr i++t+v+e+v++avaeRkkwaKfG+e+g++ g +++tt+vge+v+l+l    +++keee+ee+  ++ak+
  EPX74007.1  22 QTFDNPDGTKTMIEFRVDDNGKKVKVTRVIKKTVVTERVQHAVAERKKWAKFGKEAGKPGGVDTRTTSVGENVQLRLqlgwTTSKEEEQEEDALAAAKV 120
                 6789*************************************************************************9998666655666677777777 PP

       eIF3g  98 kkkekklvkCriCkgdHfTskCPykdt 124
                 k+k+ ++v+Cr+C+g+HfT++CPyk++
  EPX74007.1 121 KAKSGSVVRCRACRGSHFTAQCPYKNI 147
                 8778899******************86 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.8   0.0   3.2e-21   1.9e-17       1      65 [.     202     267 ..     202     272 .. 0.94

  Alignments for each domain:
  == domain 1  score: 62.8 bits;  conditional E-value: 3.2e-21
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEET CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklg 65 
                 l V+nL+ d+ eeeL++lF+ fG+i+++ l +d etg++kgfafV + ++e A +A ++l+g   +
  EPX74007.1 202 LRVTNLSDDTREEELRDLFRRFGGIQRVYLAKDkETGRAKGFAFVSYYDRECAVRARDRLDGFGWN 267
                 679**********************************************************97655 PP

>> RRM_occluded  Occluded RNA-recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   2.1e-05      0.13       2      70 ..     200     273 ..     199     275 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2.1e-05
  RRM_occluded   2 rtisllplsDtvnkariralveekegeikkivLvpdheG......AivefkdekiagkasLaLdgsefegkklrc 70 
                    t+ + +lsD   ++++r+l+    g i++++L  d+e       A+v + d++ a +a   Ldg   ++  lrc
    EPX74007.1 200 ATLRVTNLSDDTREEELRDLFRRF-GGIQRVYLAKDKETgrakgfAFVSYYDRECAVRARDRLDGFGWNNLILRC 273
                   588999******************.**********9975455556888888888888888888888888888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       579  (0.032294); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2032.16
//
Query:       EPX74008.1  [L=363]
Description: transaltion initiation factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-13   49.6   0.0    4.1e-13   48.9   0.0    1.4  1  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
  ------ inclusion threshold ------
      0.039   14.1   0.2        8.3    6.7   0.1    2.7  3  HTH_17    Helix-turn-helix domain
      0.083   13.6   1.1      0.083   13.6   1.1    2.5  2  TSP9      Thylakoid soluble phosphoprotein TSP9
        7.1    4.9   7.1        9.2    4.5   7.1    1.1  1  Menin     Menin


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.9   0.0   9.2e-17   4.1e-13       2      70 .]      89     155 ..      88     155 .. 0.97

  Alignments for each domain:
  == domain 1  score: 48.9 bits;  conditional E-value: 9.2e-17
                 EEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1   2 fVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrelk 70 
                 ++gnL++d+te ++ ++F++  +++s++lv+d  t++s+gf++VeFes +   +A+  l g+ l+gr ++
  EPX74008.1  89 YIGNLSFDLTEADIADFFGE--GVTSVRLVTDpMTERSRGFGYVEFESADLLSSAMV-LSGESLMGRAIR 155
                 9*****************97..899********************************.*********986 PP

>> HTH_17  Helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.8   8.2e+03       2      19 ..      97     114 ..      97     114 .. 0.79
   2 ?    6.7   0.1    0.0019       8.3      19      31 ..     170     184 ..     170     191 .. 0.78
   3 ?    4.4   0.0    0.0099        44      19      29 ..     213     223 ..     208     232 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.8
      HTH_17   2 ltveEaAelLgvsrstvy 19 
                 lt +++A+++g ++++v+
  EPX74008.1  97 LTEADIADFFGEGVTSVR 114
                 567899999998888876 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0019
      HTH_17  19 yrlirrgelpaa..k 31 
                 ++++rrg+lp+a  +
  EPX74008.1 170 RDWVRRGPLPPAerR 184
                 79*********9742 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.0099
      HTH_17  19 yrlirrgelpa 29 
                 +++irrg+lp 
  EPX74008.1 213 REWIRRGPLPS 223
                 79*******75 PP

>> TSP9  Thylakoid soluble phosphoprotein TSP9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1       0.7   3.1e+03      53      73 ..     243     263 ..     233     268 .. 0.43
   2 ?   13.6   1.1   1.8e-05     0.083      32      68 ..     270     307 ..     265     311 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.7
        TSP9  53 ggktsaavkvapkkkeeGgfg 73 
                 +++ts+++ + ++k +   fg
  EPX74008.1 243 QSETSSSTSTPSSKPKADPFG 263
                 233333332222222323344 PP

  == domain 2  score: 13.6 bits;  conditional E-value: 1.8e-05
        TSP9  32 TdPlLkKVdekegsggrttvrg.gktsaavkvapkkke 68 
                   P+Lk+V+ek ++  ++++r+ ++ts++ ++ ++kke
  EPX74008.1 270 NTPILKRVEEKLATKRTQVTRKdSTTSSNNEAQSEKKE 307
                 57************766677774666666655555554 PP

>> Menin  Menin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   7.1     0.002       9.2     477     588 ..     235     344 ..     211     357 .. 0.70

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.002
       Menin 477 gprreskkeeksksseqlPttladltaacgekilnpdfllqggdqplaeqkqkkageeserreannnnnsksnsekeadkkasttsnggeasstpsses 575
                 +pr+ ++ + +++ss ++P++ ++     g k ++   +l+  ++ la+++ + + ++s+++  nn+ +s++++++  +  + + s+ + a+  ++ + 
  EPX74008.1 235 KPRSATNVQSETSSSTSTPSSKPKADPFGGAKPVDNTPILKRVEEKLATKRTQVTRKDSTTSS-NNEAQSEKKEDNAVEPVTEKLSEVKVADQ-NEVPE 331
                 4566666666666777789999888899999*99999999999999***99888877777776.55555555555555544555555555555.56666 PP

       Menin 576 eaavespsehkea 588
                 +++ e+p++ + a
  EPX74008.1 332 NTQAEAPKDVEAA 344
                 7777888664444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (363 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1268  (0.0707234); expected 358.6 (0.02)
Passed bias filter:                      559  (0.0311785); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 2544.33
//
Query:       EPX74009.1  [L=599]
Description: WDR44 family WD repeat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.7e-17   61.8  12.9    6.2e-05   23.7   0.1    5.8  6  WD40         WD domain, G-beta repeat
    1.6e-08   34.8   0.2       0.12   12.7   0.0    5.1  5  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.2     2e-05      0.17      18      38 .]     209     229 ..     191     229 .. 0.86
   2 !   23.7   0.1     7e-09   6.2e-05       3      37 ..     262     296 ..     260     297 .. 0.86
   3 !   19.3   0.6   1.7e-07    0.0016       3      38 .]     303     339 ..     301     339 .. 0.81
   4 !    4.9   0.0    0.0061        55      13      38 .]     355     380 ..     343     380 .. 0.78
   5 !    5.4   0.0    0.0041        37      21      38 .]     419     436 ..     391     436 .. 0.69
   6 ?   -2.5   0.0       1.3   1.2e+04       9      37 ..     452     479 ..     448     480 .. 0.60

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2e-05
                 EETTSSEEEEEETTSEEEEEE CS
        WD40  18 fspdgawlasGsdDgtvriWd 38 
                  s++g++la++++D  +r+W+
  EPX74009.1 209 ISSSGKYLATAGKDSVIRVWK 229
                 799*****************6 PP

  == domain 2  score: 23.7 bits;  conditional E-value: 7e-09
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 ++ ++ GH   v s+++s++  +l+++s D+tvr+W
  EPX74009.1 262 PVLSCYGHkAEVLSISWSKNDFLLTASS-DRTVRLW 296
                 777889**555*********99998888.******* PP

  == domain 3  score: 19.3 bits;  conditional E-value: 1.7e-07
                 EEEEEESSSS.EEEEEEETTSSEE.EEEETTSEEEEEE CS
        WD40   3 clrtltGHss.vtslafspdgawl.asGsdDgtvriWd 38 
                 cl  +  H+  vt+++f+p  + + +sG+ D+ +++W+
  EPX74009.1 303 CLAFF-QHNEiVTCVSFHPTDDRFfVSGTLDHRIHLWS 339
                 66666.496757****99999996369999*******5 PP

  == domain 4  score: 4.9 bits;  conditional E-value: 0.0061
                 EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  13 vtslafspdgawlasGsdDgtvriWd 38 
                 ++ ++f+pdg+ ++ G   g + ++d
  EPX74009.1 355 ISTICFQPDGQRIIVGLFYGMCVLYD 380
                 999**********9995488888776 PP

  == domain 5  score: 5.4 bits;  conditional E-value: 0.0041
                 TSSEEEEEETTSEEEEEE CS
        WD40  21 dgawlasGsdDgtvriWd 38 
                 ++++++ ++dD +vri+d
  EPX74009.1 419 SKTYVLVSTDDTSVRIFD 436
                 3445556788******98 PP

  == domain 6  score: -2.5 bits;  conditional E-value: 1.3
                 SSSSE.EEEEEETTSSEEEE.EETTSEEEEE CS
        WD40   9 GHssv.tslafspdgawlas.GsdDgtvriW 37 
                 +H+ + + l  + d+++++s  +  + v++W
  EPX74009.1 452 AHGQIlSRL--NEDNSYIISkTG-SNEVMLW 479
                 553344666..777888763235.6777777 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0     0.094   8.4e+02      48      70 ..     211     233 ..     187     247 .. 0.81
   2 !    8.3   0.0   0.00031       2.8      36      89 ..     268     318 ..     257     321 .. 0.85
   3 !    6.9   0.0   0.00087       7.8      38      77 ..     310     350 ..     307     355 .. 0.85
   4 !   12.7   0.0   1.4e-05      0.12      27      82 ..     343     396 ..     332     412 .. 0.81
   5 !    4.0   0.0    0.0069        62      53      76 ..     423     446 ..     417     477 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.094
  ANAPC4_WD40  48 pdgklLavaysdgevrlldaesg 70 
                   +gk La a +d+ +r+ ++ + 
   EPX74009.1 211 SSGKYLATAGKDSVIRVWKVIEN 233
                  68999********9999987544 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00031
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                  +++ ev s++W++++ +L  a sd +vrl +    +++  ++ ++   vtc+++
   EPX74009.1 268 GHKAEVLSISWSKND-FLLTASSDRTVRLWHPMLDRCLAFFQHNEI--VTCVSF 318
                  57899*******987.667789*********999999999987766..999987 PP

  == domain 3  score: 6.9 bits;  conditional E-value: 0.00087
  ANAPC4_WD40  38 dsevrsLaWkp.dgklLavaysdgevrlldaesgkvvhsls 77 
                  ++ v++++++p d+++++ ++ d +++l ++ ++k++h  +
   EPX74009.1 310 NEIVTCVSFHPtDDRFFVSGTLDHRIHLWSVLEQKILHWNQ 350
                  677999999985789999*******************9655 PP

  == domain 4  score: 12.7 bits;  conditional E-value: 1.4e-05
  ANAPC4_WD40  27 qrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksek 82 
                  q++ +   ++ +  ++ ++++pdg+ + v+   g + l+d+ + + ++s+ +++++
   EPX74009.1 343 QKILHW--NQLEYPISTICFQPDGQRIIVGLFYGMCVLYDVDQLRYISSWLIHRSS 396
                  555555..678889*****************************9999999888765 PP

  == domain 5  score: 4.0 bits;  conditional E-value: 0.0069
  ANAPC4_WD40  53 Lavaysdgevrlldaesgkvvhsl 76 
                    v+++d++vr++d+e+  ++ +l
   EPX74009.1 423 VLVSTDDTSVRIFDVENRCMILKL 446
                  67999************9988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (599 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       698  (0.0389313); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.29s 00:00:00.85 Elapsed: 00:00:00.43
# Mc/sec: 4165.21
//
Query:       EPX74010.1  [L=349]
Description: Set1C complex subunit Swd2.1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.5e-15   57.3   0.5    4.5e-07   30.5   0.0    5.3  6  WD40         WD domain, G-beta repeat
      1e-08   35.4   0.0      0.037   14.3   0.0    4.0  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   5.3e-06     0.048      13      38 .]      29      54 ..      20      54 .. 0.85
   2 ?   -0.6   0.0      0.32   2.8e+03      16      35 ..      76      95 ..      61      96 .. 0.57
   3 !   30.5   0.0     5e-11   4.5e-07       4      38 .]     105     140 ..     102     140 .. 0.91
   4 ?    1.2   0.0      0.09     8e+02       7      27 ..     198     219 ..     192     227 .. 0.69
   5 ?    3.5   0.0     0.016   1.5e+02      16      37 ..     258     279 ..     250     280 .. 0.82
   6 ?   -3.2   0.0         2   1.8e+04      18      29 ..     331     342 ..     327     346 .. 0.64

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 5.3e-06
                EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40 13 vtslafspdgawlasGsdDgtvriWd 38
                +tsl+f+++g + +++s D t+++++
  EPX74010.1 29 ITSLSFDDSGELCLASSTDDTLKLYN 54
                9***********777777******97 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.32
                EEEETTSSEEEEEETTSEEE CS
        WD40 16 lafspdgawlasGsdDgtvr 35
                ++ ++++  +as  +D t+r
  EPX74010.1 76 FSHHSNSLIHASTKEDDTIR 95
                33333444445444688877 PP

  == domain 3  score: 30.5 bits;  conditional E-value: 5e-11
                 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 lr + GH + vtsl++sp+   ++s+s+D+t+r+Wd
  EPX74010.1 105 LRYFPGHkQAVTSLDVSPSDEIFLSASMDNTLRLWD 140
                 67799**777*************************9 PP

  == domain 4  score: 1.2 bits;  conditional E-value: 0.09
                 EESSSSEEEEEEETTSSEEE.E CS
        WD40   7 ltGHssvtslafspdgawla.s 27 
                 l  H s++ + fs dg+ ++ +
  EPX74010.1 198 LPPHVSISNIEFSTDGKNILlT 219
                 56687799999*****995333 PP

  == domain 5  score: 3.5 bits;  conditional E-value: 0.016
                 EEEETTSSEEEEEETTSEEEEE CS
        WD40  16 lafspdgawlasGsdDgtvriW 37 
                  + spd+++l+s+ d +++ i+
  EPX74010.1 258 ACMSPDSKYLFSANDEKHLAIY 279
                 467********99888887665 PP

  == domain 6  score: -3.2 bits;  conditional E-value: 2
                 EETTSSEEEEEE CS
        WD40  18 fspdgawlasGs 29 
                 f+p +a l++++
  EPX74010.1 331 FNPRHAQLVTAH 342
                 677777777765 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   4.2e-06     0.037      34      79 ..      22      67 ..      11      74 .. 0.90
   2 ?    1.9   0.0      0.03   2.7e+02      50      87 ..      82     118 ..      66     119 .. 0.79
   3 !    7.6   0.0   0.00053       4.7      36      73 ..     110     147 ..      86     161 .. 0.85
   4 !    8.4   0.0   0.00028       2.6      39      82 ..     202     245 ..     198     293 .. 0.91

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 4.2e-06
  ANAPC4_WD40 34 edkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvk 79
                 +++ ++e++sL++  +g+l   +  d +++l++  +gk v++l  k
   EPX74010.1 22 NTDLGGEITSLSFDDSGELCLASSTDDTLKLYNCVTGKFVKELASK 67
                 677899**********************************998766 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.03
  ANAPC4_WD40  50 gklLavaysdgevrlldaesgkvvhslsvksekavtcl 87 
                    + a   +d ++r ld+ + + ++ ++ +++ avt+l
   EPX74010.1  82 SLIHASTKEDDTIRYLDVVTNRYLRYFPGHKQ-AVTSL 118
                  44557778899*************99999888.58876 PP

  == domain 3  score: 7.6 bits;  conditional E-value: 0.00053
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvv 73 
                  ++++ v+sL  +p+++++  a  d+++rl d  s ++ 
   EPX74010.1 110 GHKQAVTSLDVSPSDEIFLSASMDNTLRLWDFRSPNCQ 147
                  67899************************999887665 PP

  == domain 4  score: 8.4 bits;  conditional E-value: 0.00028
  ANAPC4_WD40  39 sevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksek 82 
                   ++++++++ dgk +   +++    ++da+sg+ +  +++k++ 
   EPX74010.1 202 VSISNIEFSTDGKNILLTTANDYHYVVDAYSGQELLRIPAKTNA 245
                  57999*****************************9999988764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (349 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       337  (0.0187964); expected 358.6 (0.02)
Passed bias filter:                      292  (0.0162865); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.38s 00:00:01.03 Elapsed: 00:00:00.60
# Mc/sec: 1746.28
//
Query:       EPX74011.1  [L=223]
Description: WW domain-binding protein 4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.7e-11   42.0   0.7    1.2e-10   41.0   0.7    1.6  1  zf-U1     U1 zinc finger


Domain annotation for each model (and alignments):
>> zf-U1  U1 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.0   0.7   6.6e-15   1.2e-10       1      38 []       8      44 ..       8      44 .. 0.94

  Alignments for each domain:
  == domain 1  score: 41.0 bits;  conditional E-value: 6.6e-15
                XXSEEETTTTEEESS-SHHHHHHHHTSHHHHHHHHHHH CS
       zf-U1  1 mpkYyCdYCdiyLthDspsvRksHngGrkHkenvkdyy 38
                +pkY+C+YC+ ++  D++  R+ H++  kH ++ k+++
  EPX74011.1  8 IPKYFCKYCQQFV-TDTQLIRREHEQSFKHRNALKRFM 44
                6************.7899***************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (223 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3182  (0.177478); expected 358.6 (0.02)
Passed bias filter:                      569  (0.0317363); expected 358.6 (0.02)
Passed Vit filter:                        76  (0.00423894); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.28s 00:00:00.88 Elapsed: 00:00:00.44
# Mc/sec: 1506.04
//
Query:       EPX74012.1  [L=581]
Description: ubiquitin carboxy terminal hydrolase Ubp4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.8e-53  179.3   0.1    1.4e-52  178.8   0.1    1.2  1  UCH            Ubiquitin carboxyl-terminal hydrolase
    2.9e-15   56.7   2.2    9.7e-13   48.4   0.0    2.2  2  UCH_1          Ubiquitin carboxyl-terminal hydrolase
  ------ inclusion threshold ------
      0.053   14.2   3.7        2.3    9.1   0.2    2.8  2  zf-WRNIP1_ubi  Werner helicase-interacting protein 1 ubiquiti
       0.15   11.7   0.1       0.32   10.7   0.1    1.4  1  EpuA           DNA-directed RNA polymerase subunit beta


Domain annotation for each model (and alignments):
>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.8   0.1   3.1e-56   1.4e-52       1     257 []     227     570 ..     227     570 .. 0.92

  Alignments for each domain:
  == domain 1  score: 178.8 bits;  conditional E-value: 3.1e-56
                 -EES-SSSTHHHHHHHHHHHTSHHHHHHHHTCHHCCSSTCCCCC-.TT.TTS.TTHHHHHHHHHHHHHH.SH-CCEE--HHHHHHHHHHSGGGTSSSTC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH   1 tGlsNlGntCymnsvlQcLfsipelrdyllsleevkkesrnkkelnesnplgkkgelakalkdlfkell.kskskavsPkklkktlsklaksfsgykqq 98 
                 +Gl+NlGntCymn+vlQcLf++ el + +++      +s+    +n+ nplg+ g++  a+ +l++e+  ++ ++ vsPk+++ +++ l+++fs+  q 
  EPX74012.1 227 IGLTNLGNTCYMNCVLQCLFACGELISPMYH------KSQALGAINKGNPLGSGGKMTVAFLSLVNEVFqRKGKRVVSPKRFLDVVQCLNRDFSTDGQC 319
                 59************************88888......46666677999********************9988999************************ PP

                 EHHHHHHHHHHHHHHHHCC........................HCCCHHHHHHCCCTTSHHHHHH-EEEEE............................ CS
                 xxxxxxxxxxxxxxxxxxx........................xxxxxxxxxxxxxxxxxxxxxxxxxxxx............................ RF
         UCH  99 DaqEflaflLdqlhedlnr........................evaeekwkkhlkrndslitdlfegqlks............................ 145
                 DaqEfl+flLd+lhedln                           ++  w+ h + n s++++ f gql s                            
  EPX74012.1 320 DAQEFLNFLLDKLHEDLNCnasraplsalsdeqlsareklplsYLNYVDWNLHVRHNLSVVEESFSGQLCSriqctvcqrtsttfapftslaipipnls 418
                 ******************9***********************9777999************************************************** PP

                 .....................................EEEEEEB-SEEEEEEESEEETEE.EEE--SEEB--S....EEE-GGGBSS-BTTS-TCS-BE CS
                 .....................................xxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxx RF
         UCH 146 .....................................klklkrlPeiLiihlkRfsynss.ksKlntkvefpe....eldlssylaeekkkkteekkkY 202
                                                      ++++++l ++Lii+++Rf+ +   ++K +t+++       ++ + + ++++ +    ++++Y
  EPX74012.1 419 efvslheclrrfmayevlegpnawfcpvcqrrrpakkMMNISHLSDYLIIQIQRFRNTVVgWKKDDTPLQLNFripsNMLIPPCFQSGMNY---DQCSY 514
                 ********************************************************98889999999888776222255555666655554...4678* PP

                 EEEEEEEEESCTTSEEEEEEEECTTTTEEEEEETTEEEEE-HHCCCTT....CEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxx RF
         UCH 203 eLiavvvHsGslssGHYvayiknekngkWykydDetvkevkeeeevls....sayiLfY 257
                 +L+a+v+H+G+l++GHY++ +   ++++Wy++dD+ v++v+   + l+    s+yiLfY
  EPX74012.1 515 DLFAFVSHYGQLGNGHYTSNVF--SESQWYRIDDSIVQKVDGF-AALQrdfsSSYILFY 570
                 *******************888..8899*************65.555569********* PP

>> UCH_1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   1.1   0.00068       3.1       2      22 ..     228     248 ..     227     262 .. 0.82
   2 !   48.4   0.0   2.2e-16   9.7e-13     103     318 ..     322     547 ..     256     549 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.00068
                 xxxxxxxxxxxxxxxxxxxxx RF
       UCH_1   2 GLEnhivnsYlNslLQvlyfi 22 
                 GL n  +++Y+N++LQ+l+ +
  EPX74012.1 228 GLTNLGNTCYMNCVLQCLFAC 248
                 899999***********9866 PP

  == domain 2  score: 48.4 bits;  conditional E-value: 2.2e-16
                 xxxxxxxxxxxxxxxxxxxxxx..............................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 103 qsfnrflldqlekelketkkns..............................seeesaieqllgtkaettirclkCgseksrksstlvldlkyPkpsne 171
                 q+f +flld+l+++l+ + ++                               +++ s +e+ ++ ++ ++i+c+ C+++++    + +l +  P     
  EPX74012.1 322 QEFLNFLLDKLHEDLNCNASRAplsalsdeqlsareklplsylnyvdwnlhvRHNLSVVEESFSGQLCSRIQCTVCQRTSTTFAPFTSLAIPIP----- 415
                 89************988766669*****************************999999**********************99999999877333..... PP

                 xxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 172 kkeakvtfasilkssler...ekttrawCekCkryqpteqrktvknlPpvLalnakleeeeelelwktk.nwlpleiklsldedknleeklkeerekak 266
                 + ++ v++ ++l++++     e  +  +C+ C+r  p ++  ++ +l + L+++ +++ ++    wk++ + l+l++++    +    + l     ++ 
  EPX74012.1 416 NLSEFVSLHECLRRFMAYevlEGPNAWFCPVCQRRRPAKKMMNISHLSDYLIIQIQRFRNT-VVGWKKDdTPLQLNFRIP---S----NMLIPPCFQSG 506
                 2356799*********997777888999****************************98555.67899887*********3...2....23555555566 PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 267 aekeikvYeLqsvvvhigdskesghLvslvkvaekelerdppesqWylFNDf 318
                  + +   Y+L+++v h g +  +gh+ s v            esqWy ++D 
  EPX74012.1 507 MNYDQCSYDLFAFVSHYG-QLGNGHYTSNVFS----------ESQWYRIDDS 547
                 788999************.655******9983..........479*****97 PP

>> zf-WRNIP1_ubi  Werner helicase-interacting protein 1 ubiquitin-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.4    0.0091        41       3      10 ..     392     399 ..     390     401 .. 0.87
   2 ?    9.1   0.2    0.0005       2.3       5      16 ..     444     455 ..     442     462 .. 0.76

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0091
  zf-WRNIP1_ubi   3 vqCPvCqq 10 
                    +qC vCq 
     EPX74012.1 392 IQCTVCQR 399
                    8******6 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0005
  zf-WRNIP1_ubi   5 CPvCqqmmPAAH 16 
                    CPvCq   PA  
     EPX74012.1 444 CPVCQRRRPAKK 455
                    ******999975 PP

>> EpuA  DNA-directed RNA polymerase subunit beta
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1   7.2e-05      0.32      20      44 ..     523     548 ..     523     549 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 7.2e-05
        EpuA  20 YgviGd.gnpldvLspdtWqhIidfi 44 
                 Yg +G+    ++v+s++ W++I d i
  EPX74012.1 523 YGQLGNgHYTSNVFSESQWYRIDDSI 548
                 9*****555689**********8865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (581 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       529  (0.0295053); expected 358.6 (0.02)
Passed bias filter:                      378  (0.0210832); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 4050.68
//
Query:       EPX74013.1  [L=327]
Description: zf-CHY type zinc finger protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.5e-11   44.6  26.7    1.7e-10   41.3  13.6    3.4  3  zf-CHY          CHY zinc finger
  ------ inclusion threshold ------
      0.052   13.3   0.7      0.052   13.3   0.7    3.0  4  Ski_Sno         SKI/SNO/DAC family
       0.11   12.4   0.1       0.11   12.4   0.1    3.9  5  Cys_rich_KTR    Cysteine-rich KTR


Domain annotation for each model (and alignments):
>> zf-CHY  CHY zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.1   0.2    0.0013       7.7      12      49 ..      79     113 ..      73     118 .. 0.67
   2 ?    3.9   1.1     0.013        78      44      62 ..     164     182 ..     144     194 .. 0.52
   3 !   41.3  13.6   2.8e-14   1.7e-10       1      62 [.     231     292 ..     231     303 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0013
      zf-CHY  12 rapcCkklyaCreCHeeledhelerlevkevlcllCet 49 
                 +ap  k + +C +CH     +e++ +e+ ++ c++C++
  EPX74013.1  79 KAPRLKLVIKCVRCHY---GNEVSVQEKYSLACSKCNN 113
                 5556666778888886...4555556666667888875 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.013
      zf-CHY  44 cllCeteqekavlCkkCkk 62 
                  +  ++ q+ a+ C++C++
  EPX74013.1 164 FKGVSSMQPMAQFCRSCRT 182
                 2222334455555555544 PP

  == domain 3  score: 41.3 bits;  conditional E-value: 2.8e-14
      zf-CHY   1 CkHykravvairapcCkklyaCreCHeeledhelerlevkevlcllCeteq..ekavlCkkCkk 62 
                 C+Hyk+++ ++r+pcC+++yaC++CH+  +dh l++++++ ++c  C+ e   +k+ +C++C++
  EPX74013.1 231 CEHYKKSYRWFRFPCCNRIYACDKCHDIDQDH-LNEYAKR-IICGYCSFESmyTKEGTCSHCGN 292
                 ***************************66666.7777655.89****99984456667****97 PP

>> Ski_Sno  SKI/SNO/DAC family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       1.9   1.1e+04      72      83 ..      38      49 ..      34      54 .. 0.71
   2 ?    0.1   0.2      0.11   6.5e+02      60      71 ..      82      93 ..      67      96 .. 0.78
   3 ?   -1.0   0.0      0.24   1.4e+03      61      73 ..     102     114 ..      95     136 .. 0.72
   4 ?   13.3   0.7   8.6e-06     0.052      65      93 ..     151     179 ..     133     189 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 1.9
     Ski_Sno 72 peQleiLrelga 83
                ++Q+++++++++
  EPX74013.1 38 NNQVTTFKNTQI 49
                578888888875 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.11
     Ski_Sno 60 lkeLeitcvrCt 71
                + +L i cvrC 
  EPX74013.1 82 RLKLVIKCVRCH 93
                56899******6 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 0.24
     Ski_Sno  61 keLeitcvrCtpe 73 
                 ++ +++c++C++ 
  EPX74013.1 102 EKYSLACSKCNNG 114
                 567889****963 PP

  == domain 4  score: 13.3 bits;  conditional E-value: 8.6e-06
     Ski_Sno  65 itcvrCtpeQleiLrelgalppsvkrcgl 93 
                 + c++Ct eQ+ +++++  ++p ++ c  
  EPX74013.1 151 VSCLECTDEQVIVFKGVSSMQPMAQFCRS 179
                 78**********************99975 PP

>> Cys_rich_KTR  Cysteine-rich KTR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.1     0.032   1.9e+02      23      35 ..     101     113 ..      91     118 .. 0.84
   2 ?   -2.1   0.0      0.58   3.5e+03      30      42 ..     153     165 ..     150     171 .. 0.83
   3 ?   12.4   0.1   1.8e-05      0.11      29      52 ..     176     199 ..     167     201 .. 0.88
   4 ?   -3.0   0.2       1.1   6.8e+03       2      10 ..     239     247 ..     238     248 .. 0.85
   5 ?   -2.3   0.4       0.7   4.2e+03       6      16 ..     287     297 ..     286     300 .. 0.70

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.032
  Cys_rich_KTR  23 LknfpLfCPKCkq 35 
                    +++ L C KC +
    EPX74013.1 101 QEKYSLACSKCNN 113
                   5799*******75 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.58
  Cys_rich_KTR  30 CPKCkqetlinvk 42 
                   C  C  e++i +k
    EPX74013.1 153 CLECTDEQVIVFK 165
                   8899999999887 PP

  == domain 3  score: 12.4 bits;  conditional E-value: 1.8e-05
  Cys_rich_KTR  29 fCPKCkqetlinvkqlkievikep 52 
                   fC+ C+  tl+++++ k + +k+ 
    EPX74013.1 176 FCRSCRTRTLVHFQDTKFQLLKQR 199
                   *******************99986 PP

  == domain 4  score: -3.0 bits;  conditional E-value: 1.1
  Cys_rich_KTR   2 eWvlcPvCg 10 
                   +W   P+C+
    EPX74013.1 239 RWFRFPCCN 247
                   79999*997 PP

  == domain 5  score: -2.3 bits;  conditional E-value: 0.7
  Cys_rich_KTR   6 cPvCgnkTRlk 16 
                   c  Cgn T  +
    EPX74013.1 287 CSHCGNFTTRR 297
                   899*9977444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       852  (0.0475208); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2418.84
//
Query:       EPX74014.1  [L=292]
Description: complexed with Cdc5 protein Cwf16 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.3e-54  185.3   6.2    3.4e-54  184.7   6.2    1.3  1  DUF572         Family of unknown function (DUF572)
    0.00013   22.1   3.3       0.26   11.6   0.5    2.4  2  zinc_ribbon_9  zinc-ribbon
  ------ inclusion threshold ------
       0.13   11.9   1.5       0.25   11.0   1.5    1.5  1  DUF3332        Domain of unknown function (DUF3332)
       0.21   11.7   3.0        6.7    6.8   1.8    2.4  2  RRM_3          RNA binding motif
        3.5    9.1   6.6        1.1   10.7   0.1    2.8  3  Bravo_FIGEY    Bravo-like intracellular region


Domain annotation for each model (and alignments):
>> DUF572  Family of unknown function (DUF572)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  184.7   6.2   9.5e-58   3.4e-54       1     242 [.       8     257 ..       8     290 .. 0.75

  Alignments for each domain:
  == domain 1  score: 184.7 bits;  conditional E-value: 9.5e-58
      DUF572   1 kYyPPDfdpskipalrekarlknrqlvvRlmaPfnmrCktCgeyIykGvkFNarKekVgnetYlgipIfrFyikCtrClneitfkTDPkntdYvveeGa 99 
                 +Y PPD d ++ +  r k        vvR+++Pf ++C +C++ I +G++FNa+K+++g   Y++ +I++F++ C+ C+n i+++TDPknt+Yvv +G+
  EPX74014.1   8 RYHPPDEDGKRRK--RIK-----TKNVVRFEMPFAVWCYQCQNLISQGTRFNAEKKQIGS--YYSSKIWSFTFHCHTCSNAIEIHTDPKNTEYVVCNGG 97 
                 79******33222..333.....4479*********************************..************************************* PP

      DUF572 100 tRnfkaekleeeeakreekekeeeeaedamkklEkrtkdskkemealesLeeLqelnqrqakvdfdanlelrkefreekkereeeeedeealkekisle 198
                 +R  +a  +      +     + + + d++++lEk+++ +kk+ +++ +Le + e n+rq+ ++++ +++lrk+fre+kk  +e+e+ e++lk++++l 
  EPX74014.1  98 KRRIDAASTGTIS--SVA--TDGNGNHDPLEALEKSVATQKKKEDQNTELELIYEKNERQWADPMTVSQKLRKRFREKKKMIKEQEQLENELKDQAGL- 191
                 **77666644444..333..3334569*********************************************************************99. PP

      DUF572 199 kikllpedeedekkaklle..gkteslfasseesaksakk.kptkk.....................e 242
                   +llp +  de  a+ l    +t s   +++ ++k   k k+  +                     +
  EPX74014.1 192 GFSLLPPTVSDEIIAHHLVrhERTGSHMPTNPDNKKIFMKkKE--RfanfddtasptgflrfpkvldT 257
                 9999999886666665554233333333333333332222122..12334444445555555533332 PP

>> zinc_ribbon_9  zinc-ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.1   0.00013      0.48       4      13 ..      37      46 ..      35      55 .. 0.81
   2 !   11.6   0.5   7.3e-05      0.26       3      30 ..      71      97 ..      70      97 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00013
  zinc_ribbon_9  4 WChqCdrfVs 13
                   WC+qC++ +s
     EPX74014.1 37 WCYQCQNLIS 46
                   ******8776 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 7.3e-05
  zinc_ribbon_9  3 yWChqCdrfVsvspdedsdvlCPhCggg 30
                   + Ch C++++++++d  +   +  C+gg
     EPX74014.1 71 FHCHTCSNAIEIHTDPKNTE-YVVCNGG 97
                   67**********99966665.6667665 PP

>> DUF3332  Domain of unknown function (DUF3332)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   1.5     7e-05      0.25      82     153 ..     106     177 ..      89     190 .. 0.69

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 7e-05
     DUF3332  82 vgevkkvngeldgslykvettkngytiekeden.tekvelvyekeekswsvvkdgesaellkfkedgtvkvyl 153
                 +g++ +v ++ +g++  +e+ ++++  +k++e+ ++++el+yek+e++w+      s++l+k+ ++++  + +
  EPX74014.1 106 TGTISSVATDGNGNHDPLEALEKSVATQKKKEDqNTELELIYEKNERQWADPM-TVSQKLRKRFREKKKMIKE 177
                 6888888888899988899888887766655540569************9744.4444555555544443444 PP

>> RRM_3  RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   1.8    0.0019       6.7      50     101 ..     122     172 ..     111     174 .. 0.81
   2 ?    3.7   0.0     0.018        64      32      77 ..     238     287 ..     215     292 .] 0.75

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0019
                 HHHHHHHHHHC-B-CCTSSEEEEE--HHHHHHHHHHHHHHHHHCC---S-SS CS
       RRM_3  50 akkalekateaklkikdaevtlelLeGeeEkeywkkiledkqkkknnarekg 101
                   +alek +++++k +d++ +lel+   +E++    + + ++ +k + rek+
  EPX74014.1 122 PLEALEKSVATQKKKEDQNTELELIYEKNERQWADPMTVSQKLRK-RFREKK 172
                 55899********************99998887777777777776.556555 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.018
                 EE-TTSS.EEEEEESSHHHHHHHHHHHHHC..-B-CCTSSEEEEE--.HH CS
       RRM_3  32 dyekgdk.egevrFkedeeakkalekatea..klkikdaevtlelLe.Ge 77 
                 ++ ++++ +g +rF +  + k   +k t+   ++ki +++ t+ l+e Ge
  EPX74014.1 238 NFDDTASpTGFLRFPKVLDTKSTGDKVTNLkeHVKIPEKNSTASLVEyGE 287
                 44444432899******9****999999998889999******9998444 PP

>> Bravo_FIGEY  Bravo-like intracellular region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.2      0.59   2.1e+03      36      64 ..     118     144 ..      87     156 .. 0.67
   2 ?   -1.6   2.6       2.1   7.6e+03      34      42 ..     161     169 ..     124     192 .. 0.42
   3 ?   10.7   0.1    0.0003       1.1      33      72 ..     246     291 ..     211     292 .] 0.67

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.59
  Bravo_FIGEY  36 eeekplkssqksleesskevesdsddsLd 64 
                   +++pl++ +ks+  ++k  ++d++ +L+
   EPX74014.1 118 GNHDPLEALEKSVATQKK--KEDQNTELE 144
                  466778887778877777..444444444 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 2.1
  Bravo_FIGEY  34 sdeeekplk 42 
                  s++ +k+ +
   EPX74014.1 161 SQKLRKRFR 169
                  222222222 PP

  == domain 3  score: 10.7 bits;  conditional E-value: 0.0003
  Bravo_FIGEY  33 y......sdeeekplkssqksleesskevesdsddsLdeYgegdeg 72 
                         +  + k++  + ++l+e+ k +e++s+ sL+eYge+de+
   EPX74014.1 246 TgflrfpKVLDTKSTGDKVTNLKEHVKIPEKNSTASLVEYGESDES 291
                  1334444445555566666999********************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (292 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1493  (0.0832729); expected 358.6 (0.02)
Passed bias filter:                      608  (0.0339115); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.28s 00:00:00.81 Elapsed: 00:00:00.44
# Mc/sec: 2000.76
//
Query:       EPX74015.1  [L=436]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.4e-20   70.9   1.9    7.6e-15   54.8   0.2    3.5  3  PPR_2     PPR repeat family
      5e-05   23.3   2.0     0.0019   18.2   0.1    2.8  3  PPR_3     Pentatricopeptide repeat domain
     0.0015   18.6   9.4       0.11   12.8   0.4    4.5  4  PPR       PPR repeat
     0.0044   17.4   2.5      0.026   14.9   1.2    2.5  2  RPM2      Mitochondrial ribonuclease P subunit (RPM2)
  ------ inclusion threshold ------
      0.074   12.8   0.0       0.58    9.9   0.0    2.4  2  PPR_1     PPR repeat


Domain annotation for each model (and alignments):
>> PPR_2  PPR repeat family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.8   0.2   2.1e-18   7.6e-15       1      49 [.     105     153 ..     105     154 .. 0.96
   2 ?    0.5   0.0      0.19   6.9e+02      15      48 ..     164     199 ..     160     208 .. 0.75
   3 !   12.5   0.0   3.6e-05      0.13      11      45 ..     367     401 ..     365     405 .. 0.90

  Alignments for each domain:
  == domain 1  score: 54.8 bits;  conditional E-value: 2.1e-18
       PPR_2   1 pdvvtyNtlIsglckkgkveeAfklfneMkkrglePnsyTysilikglc 49 
                 p +v+yN+l+ ++++kg+++ A++l+n Mkk    Pn++Ty+il++gl 
  EPX74015.1 105 PKTVAYNHLLEYHLRKGEYNFAWSLYNMMKKSMQVPNEFTYTILLQGLY 153
                 789*****************************999************95 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.19
       PPR_2  15 kkgkveeAfklfneMkk..rglePnsyTysilikgl 48 
                 k++ +e   k++n   +   +++Pn++  +il +++
  EPX74015.1 164 KRKLSELIKKVYNNLYRsnSSVTPNAIHINILAQCC 199
                 566677788888888884347899988888887765 PP

  == domain 3  score: 12.5 bits;  conditional E-value: 3.6e-05
       PPR_2  11 sglckkgkveeAfklfneMkkrglePnsyTysili 45 
                   +++ +++++ + l+ eM + gl P++ T  i +
  EPX74015.1 367 RIYVESKQINKIMGLLREMNEMGLLPTAQTMAIAM 401
                 67999*************************98865 PP

>> PPR_3  Pentatricopeptide repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.1   5.3e-07    0.0019       7      58 ..      99     150 ..      95     153 .. 0.92
   2 ?   -2.7   0.0       1.9   6.7e+03      11      37 ..     185     211 ..     181     214 .. 0.59
   3 ?    3.5   0.0      0.02        73      22      52 ..     366     396 ..     357     407 .. 0.84

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 5.3e-07
       PPR_3   7 erkgikldvvtYthLLtayanagnkklalevlermkkkgikPtvvtyNailg 58 
                 ++k + +  v Y+hLL+   + g+++ a    + mkk    P+  ty ++l+
  EPX74015.1  99 VKKSLAPKTVAYNHLLEYHLRKGEYNFAWSLYNMMKKSMQVPNEFTYTILLQ 150
                 6677888999*************************************99985 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1.9
       PPR_3  11 ikldvvtYthLLtayanagnkklalev 37 
                 + ++ +  + L + + + ++ + a+ +
  EPX74015.1 185 VTPNAIHINILAQCCLKLKDVEFANDI 211
                 445555555555666666666666665 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.02
       PPR_3  22 LtayanagnkklalevlermkkkgikPtvvt 52 
                 L+ y+  +  + ++  l +m + g+ Pt  t
  EPX74015.1 366 LRIYVESKQINKIMGLLREMNEMGLLPTAQT 396
                 788999999999***************9877 PP

>> PPR  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.4   3.1e-05      0.11       1      28 [.     108     135 ..     108     136 .. 0.96
   2 ?    0.5   0.1      0.25   9.1e+02       1      10 [.     143     152 ..     143     154 .. 0.88
   3 ?    1.2   0.0      0.16   5.6e+02       4      23 ..     193     212 ..     191     214 .. 0.89
   4 !    6.0   0.2    0.0044        16       8      31 .]     367     390 ..     366     390 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3.1e-05
         PPR   1 vtynslIsgycknGkleeAlelfkeMke 28 
                 v+yn l+  + ++G++  A +l++ Mk+
  EPX74015.1 108 VAYNHLLEYHLRKGEYNFAWSLYNMMKK 135
                 79*************************8 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.25
         PPR   1 vtynslIsgy 10 
                 +ty++l++g+
  EPX74015.1 143 FTYTILLQGL 152
                 69*****997 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.16
         PPR   4 nslIsgycknGkleeAlelf 23 
                 n+l +++ k  ++e A +++
  EPX74015.1 193 NILAQCCLKLKDVEFANDIL 212
                 8999**********998876 PP

  == domain 4  score: 6.0 bits;  conditional E-value: 0.0044
         PPR   8 sgycknGkleeAlelfkeMkekGi 31 
                 + y+ + ++ + + l++eM e+G+
  EPX74015.1 367 RIYVESKQINKIMGLLREMNEMGL 390
                 679999***************996 PP

>> RPM2  Mitochondrial ribonuclease P subunit (RPM2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   1.2   7.2e-06     0.026      32     109 ..     114     195 ..      93     203 .. 0.82
   2 ?    0.5   0.0      0.21   7.7e+02      35      74 ..     369     408 ..     359     418 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 7.2e-06
        RPM2  32 iekiyekkeynkinalyksLkrneivpslelfekvLksivkrdlDnedi.dnklveLL.tvyqDiisnk..lkPnkeiyeiv 109
                 +e +++k eyn   +ly+ +k+   vp+  ++++ L+ +    ++ne     kl eL+ +vy ++   +  + Pn+   +i 
  EPX74015.1 114 LEYHLRKGEYNFAWSLYNMMKKSMQVPNEFTYTILLQGLYSILVNNEAAsKRKLSELIkKVYNNLYRSNssVTPNAIHINIL 195
                 678999***********************************99999765156899998459999986544588887666665 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.21
        RPM2  35 iyekkeynkinalyksLkrneivpslelfekvLksivkrd 74 
                  +e k+ nki  l + +   +++p  +++ + +    +r+
  EPX74015.1 369 YVESKQINKIMGLLREMNEMGLLPTAQTMAIAMSPCLQRK 408
                 45669999**999999999999999999988887777776 PP

>> PPR_1  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.29     1e+03       3      33 ..     103     133 ..     101     134 .. 0.70
   2 ?    9.9   0.0   0.00016      0.58       4      17 ..     139     152 ..     136     152 .. 0.92

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.29
                 ----HHHHHHHHHHHHHTS-HHHHHHHHHHH CS
       PPR_1   3 lkPdvvTYNtLIdGlCkaGrvdeAfelfdeM 33 
                 l P +v YN L+    ++G+ + A  l + M
  EPX74015.1 103 LAPKTVAYNHLLEYHLRKGEYNFAWSLYNMM 133
                 6788899999987666777766666666666 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00016
                 ---HHHHHHHHHHH CS
       PPR_1   4 kPdvvTYNtLIdGl 17 
                 +P+ +TY++L+ Gl
  EPX74015.1 139 VPNEFTYTILLQGL 152
                 6**********997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (436 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       685  (0.0382063); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 3148.19
//
Query:       EPX74016.1  [L=251]
Description: 60S ribosomal protein L7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.9e-24   84.1  17.2    1.2e-23   83.1  17.2    1.5  1  Ribosomal_L30_N  Ribosomal L30 N-terminal domain
    4.1e-18   65.0   3.2    4.2e-18   65.0   1.6    1.9  2  Ribosomal_L30    Ribosomal protein L30p/L7e


Domain annotation for each model (and alignments):
>> Ribosomal_L30_N  Ribosomal L30 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.1  17.2   1.3e-27   1.2e-23       1      72 []      16      87 ..      16      87 .. 0.99

  Alignments for each domain:
  == domain 1  score: 83.1 bits;  conditional E-value: 1.3e-27
  Ribosomal_L30_N  1 vPEsllKKrkrneklkakrakkaaakkkankkkrklifkRaekYvkEYrqkereeirlkReAkkaGnfyvpa 72
                     +PEsllKK+k++e+ +++r ++aa+kk  ++kkr+li kRae+Y +EYr++ere+i+l+R+A+++Gnfyvp+
       EPX74016.1 16 APESLLKKKKTQEQSREQRVAAAAEKKGLRQKKRELIAKRAEAYDAEYRKAEREQIELARKARAEGNFYVPD 87
                     5*********************************************************************96 PP

>> Ribosomal_L30  Ribosomal protein L30p/L7e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.0   1.6   4.7e-22   4.2e-18       1      51 []      92     142 ..      92     142 .. 0.99
   2 ?   -3.6   0.0       1.2   1.1e+04      44      51 .]     149     156 ..     148     156 .. 0.83

  Alignments for each domain:
  == domain 1  score: 65.0 bits;  conditional E-value: 4.7e-22
                    EEEEE-S-STTS-HHHHHHHHHTT-SSTT.EEEE--SSHHHHHHHHHCCCGE CS
  Ribosomal_L30   1 lfVtrirsiigvppkvrktLqlLgLrkin.gtvvklntpsirGmLkkVkhlV 51 
                    +fV+r r+++++ppk rk++qlL+L +in g+++k n++++  mL+ V+++V
     EPX74016.1  92 IFVIRLRGVNNIPPKARKIMQLLRLIQINnGVFIKFNKATKE-MLQVVEPYV 142
                    6*****************************************.********9 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 1.2
                    HHHCCCGE CS
  Ribosomal_L30  44 LkkVkhlV 51 
                    Lk V++l+
     EPX74016.1 149 LKTVRELI 156
                    78999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (251 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1471  (0.0820458); expected 358.6 (0.02)
Passed bias filter:                      730  (0.0407162); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.39
# Mc/sec: 1908.21
//
Query:       EPX74017.1  [L=139]
Description: 40S ribosomal protein S14 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.9e-47  158.6   2.9    7.1e-47  158.4   2.9    1.1  1  Ribosomal_S11  Ribosomal protein S11
  ------ inclusion threshold ------
      0.064   13.5   0.1       0.12   12.6   0.1    1.5  1  CBM_25         Carbohydrate binding domain (family 25)


Domain annotation for each model (and alignments):
>> Ribosomal_S11  Ribosomal protein S11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.4   2.9   7.9e-51   7.1e-47       1     110 []      17     135 ..      17     135 .. 0.99

  Alignments for each domain:
  == domain 1  score: 158.4 bits;  conditional E-value: 7.9e-51
  Ribosomal_S11   1 GvahiqasfnntiititdlkGaevlvksaGglgvkasr.kssPyaaqlaaekaaekvldkGikavevkvkg........pGpGreaalralaraGl 87 
                    Gvahi+asfn+t+++itdl+G+e++++ +Gg++vk++r +ssPyaa+laa++aa k+++ Gi+a+++k+++        pGpG++aalralaraG+
     EPX74017.1  17 GVAHIFASFNDTFVHITDLTGKETITRVTGGMKVKTDRdESSPYAAMLAAQDAAVKCKEVGITALHIKIRAtggtatktPGPGAQAALRALARAGM 112
                    9*********************************************************************************************** PP

  Ribosomal_S11  88 kigriedvtPiPhdgirrpkkrr 110
                    +igriedvtP+P+d++rr+++rr
     EPX74017.1 113 RIGRIEDVTPVPTDSTRRKGGRR 135
                    ********************998 PP

>> CBM_25  Carbohydrate binding domain (family 25)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   1.4e-05      0.12      13      58 ..      74     119 ..      66     129 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.4e-05
      CBM_25  13 rkkGftsayihyrpaGGswtavpGvkmrdaeaGyakkdvdlGaass 58 
                 ++ G t+ +i+ r +GG+ t +pG + ++a    a+  + +G   +
  EPX74017.1  74 KEVGITALHIKIRATGGTATKTPGPGAQAALRALARAGMRIGRIED 119
                 67899*************************9999999888887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       331  (0.0184617); expected 358.6 (0.02)
Passed bias filter:                      250  (0.0139439); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 1100.57
//
Query:       EPX74018.1  [L=140]
Description: 40S ribosomal protein S16 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.9e-31  109.1   0.5    2.1e-31  108.9   0.5    1.0  1  Ribosomal_S9  Ribosomal protein S9/S16


Domain annotation for each model (and alignments):
>> Ribosomal_S9  Ribosomal protein S9/S16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.9   0.5   1.2e-35   2.1e-31       1     121 []       8     140 .]       8     140 .] 0.91

  Alignments for each domain:
  == domain 1  score: 108.9 bits;  conditional E-value: 1.2e-35
                   EECTTEEEEEEEEESSSEEEETTEECCHHSTTSCHHHHHCHHHHHTTTSS..SEEEEEEEESS-HHHHHHHHHHHHHHHHHHHHH.....HHHHHHC CS
  Ribosomal_S9   1 GrrKesvArvwikegkgkilvngksleeYfkeeaarekvleplkltgllg..kfdvfvkvkgGGlsgqaeAirlgiaraLvalek.....eekkeLk 90 
                   G++ +++A +++k+gkg i+vng +l+  ++ e  r+kv+ep+ ++g  +   +d++v+v+gGG+++q++Air++i++a+va+++     ++k eLk
    EPX74018.1   8 GKKGNATAVAHCKAGKGLIKVNGAPLSL-VQPEILRMKVYEPILVAGADKfaGVDIRVRVSGGGHVSQIYAIRQAISKAIVAYYQkfvdeHSKAELK 103
                   8999************************.877**************9987645******************************98788753377777 PP

                   ......TCCCTS-B--------TTSSCTTB----S-- CS
  Ribosomal_S9  91 ......kaglltrDpRvvErkKtgkkkARkkyqwskR 121
                         +++ll++DpR++E+kK+g ++AR++ q+s+R
    EPX74018.1 104 kalvtyDRTLLVADPRRMEPKKFGGHGARARQQKSYR 140
                   5555888****************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       480  (0.0267723); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.42
# Mc/sec: 1010.39
//
Query:       EPX74019.1  [L=401]
Description: cmgc/cdk/pitslre protein kinase Ppk23 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.5e-62  209.8   0.0      6e-62  209.4   0.0    1.2  1  Pkinase        Protein kinase domain
    8.4e-23   81.0   0.0    1.4e-22   80.2   0.0    1.4  1  Pkinase_Tyr    Protein tyrosine kinase
    2.4e-05   23.4   0.1    5.6e-05   22.3   0.1    1.4  1  Haspin_kinase  Haspin like kinase domain
  ------ inclusion threshold ------
      0.075   12.9   0.2       0.13   12.2   0.2    1.4  1  APH            Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  209.4   0.0   1.3e-65     6e-62       1     264 []      74     359 ..      74     359 .. 0.93

  Alignments for each domain:
  == domain 1  score: 209.4 bits;  conditional E-value: 1.3e-65
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEE..SSEEEEEEE--TTEBHHHHHH.HHSS-- CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfee..kdelylvleyveggeladlle.rkgsls 96 
                 ye l+k+ eGs+G Vy+a+ek+t++ vA+Kkik + +      + lrEi+ l++++h+++++l++v+     +++ylv+e++e++ l+ ll      + 
  EPX74019.1  74 YEILNKIEEGSYGIVYRAKEKSTERLVALKKIKFDPNGFGFPITSLREIHSLNSVRHDHVMELKKVVVGndLKDIYLVMEFMEHD-LKFLLDdMPEDFL 171
                 788999***********************************************************997533789*********87.8888873333488 PP

                 HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.BCTTTSCGGGS-HHHH.TTSCBSHHHHHHHHHHHHHHHHHS CS
     Pkinase  97 eeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.ltsfvgtseYlAPEvl.keneyskkvDvWslGvilyelltg 193
                  +e+k ++ q+l++ + +H +  +HrDlKp+N+L++++ge+K++DFGla+  ++ ++ lt +v+t +Y+APE+l ++ +y++++D+Ws+G+i++e++++
  EPX74019.1 172 ISEVKTLLLQLLASTATIHYHWHLHRDLKPSNLLMNNTGEIKVADFGLARPTSEPKPkLTRVVVTLWYRAPELLlGTPSYGREIDMWSIGCIFAEMVNR 270
                 88************************************************99998877****************899999******************* PP

                 S-STTTSSHHHHHHHHHHTHHHHHHHCT.SHH...HHHTTS........................-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 194 kppfsgekgkekvekeldqlekilkilg.etkeklpeasei........................seeakdllkkllkkdpkkRltaeellqhpyl 264
                 +p+f+   gk+    eldql+ki++ilg + +e++p+ + +                          +  dl+++ll+ +p kR++a+e+l hp++
  EPX74019.1 271 TPLFP---GKN----ELDQLHKIFNILGyPDEEDWPQYRLLphaskiklptiktknrlrevvknlTANGYDLMERLLCLNPAKRISAKEALLHPFF 359
                 *****...555....899**********8667777777777999999***********************************************98 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.2   0.0   3.2e-26   1.4e-22       3     206 ..      76     301 ..      74     356 .. 0.76

  Alignments for each domain:
  == domain 1  score: 80.2 bits;  conditional E-value: 3.2e-26
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHH.HHHHHHHHHHHHTS-BTTB--EEEEEE..SSSSEEEEEE--TTEBHHHHHHHTCT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateee.keelleeakimkklkhpnivkllgvct..keepllivteyvkgGdLlkfLrkkek 97 
                  + +k+ eG++G V++++ k    ++e  Va+K++k + +        l+e++ +++++h+++++l  v++  + + +++v+e++++ dL+  L +   
   EPX74019.1  76 ILNKIEEGSYGIVYRAKEK----STERLVALKKIKFDPNGFGfPITSLREIHSLNSVRHDHVMELKKVVVgnDLKDIYLVMEFMEH-DLKFLLDDM-P 167
                  67899***********999....9999*******877666554678899*********************766677********99.787777776.* PP

                  TTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE.EEHHHHHHHHHHH CS
  Pkinase_Tyr  98 ekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk.ftsksDvWsfGvl 194
                  e + ++++  + lq+ +  + ++ +  +Hrdl   N L++++  +k++DfGLar +  ++   k ++  + + + apE l  +  +  + D+Ws G +
   EPX74019.1 168 EDFLISEVKTLLLQLLASTATIHYHWHLHRDLKPSNLLMNNTGEIKVADFGLARPT--SEPKPKLTRVVVTLWYRAPELLLGTPsYGREIDMWSIGCI 263
                  ******************************************************99..34444455556666667***9876544************* PP

                  HHHHHTTSSGT............................T CS
  Pkinase_Tyr 195 lwEiftlgesp............................y 206
                    E+++  ++p                            y
   EPX74019.1 264 FAEMVN--RTPlfpgkneldqlhkifnilgypdeedwpqY 301
                  ****99..44443455555555555555555555555543 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.1   1.2e-08   5.6e-05      62     257 ..      34     223 ..      17     237 .. 0.76

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 1.2e-08
  Haspin_kinase  62 rnsesllslnsqeev...kdfdevilsqi..lelckikkilneadlasllndseklssevyqtke..kdkevvlKviplevledvtiskelslkel 150
                    + +  ll +  ++e    ++f  +++ ++  l  c+    ++++++ ++++  e++++ vy++ke  +++ v+lK+i +   + +    ++sl e 
     EPX74019.1  34 KRKRELLEEETTKEDrniLSFRSYLSANVprLGSCDG---IQDYEILNKIE--EGSYGIVYRAKEksTERLVALKKIKF-DPNGFGFP-ITSLREI 122
                    4445566555444433559999999986522666766...88888888886..568999*****96566779*******.57778777.99***** PP

  Haspin_kinase 151 kslklvkgtypglllllqdkvlkekpdfyseqqlflvlllkdkGtdLeev.....klkswkqalsifwqivkiLyvaEtkfeFEHRdLhldniLvd 241
                    +sl+ v+     +++ l++ v+ ++          ++l+++++ +dL+ +     +   +++++ ++ q +++ +    ++++ HRdL+  n L++
     EPX74019.1 123 HSLNSVRHD---HVMELKKVVVGND-------LKDIYLVMEFMEHDLKFLlddmpEDFLISEVKTLLLQLLASTATIHYHWHL-HRDLKPSNLLMN 207
                    ***999988...8888888887776.......455666677777777655443355556799999999999999888888887.************ PP

  Haspin_kinase 242 knlnvtlidlklsRle 257
                    +++++ + d+ l+R +
     EPX74019.1 208 NTGEIKVADFGLARPT 223
                    **************76 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.2   2.8e-05      0.13     154     198 ..     187     222 ..     119     224 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2.8e-05
                 HHHHHH--SSS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-EE CS
         APH 154 aalaallpgelptvllHgDlhpgNllvdpddgrvtGviDfedagl 198
                 a++  ++        lH+Dl+p Nll++ + g++  v Df++a++
  EPX74019.1 187 ATIHYHW-------HLHRDLKPSNLLMN-NTGEI-KVADFGLARP 222
                 4444444.......49************.66776.7999999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       955  (0.0532657); expected 358.6 (0.02)
Passed bias filter:                      556  (0.0310112); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.29s 00:00:00.88 Elapsed: 00:00:00.46
# Mc/sec: 2614.72
//
Query:       EPX74020.1  [L=1045]
Description: arginine transporter Can1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.1e-55  187.2  35.3    5.1e-55  186.9  35.3    1.1  1  AA_permease    Amino acid permease
    9.2e-19   67.6  37.1    1.5e-18   66.8  37.1    1.3  1  AA_permease_2  Amino acid permease
    1.2e-15   57.6   1.5      7e-07   28.6   0.0    3.1  3  SLC12          Solute carrier family 12
  ------ inclusion threshold ------
       0.74    9.6   3.8       0.81    9.5   1.9    2.0  2  Fn_bind        Fibronectin binding repeat


Domain annotation for each model (and alignments):
>> AA_permease  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  186.9  35.3   1.1e-58   5.1e-55       5     478 ..      86     559 ..      82     560 .. 0.89

  Alignments for each domain:
  == domain 1  score: 186.9 bits;  conditional E-value: 1.1e-58
  AA_permease   5 ialggviGtglfvglgvvlsqaGplgallayllagvviflvmlslgeiatngp.ksggfytyasrflgpelGfviGlnylfswitvlalel.taasil 100
                   + ++v ++ l+++  +++++aG+l++l+++++++++ fl+ ls+++i tng  ++gg+y+ +sr++gpe+G++iG+++ + +i++ ++ + + ++++
   EPX74020.1  86 PTTLNVLSILLYLRFPWIVGEAGVLKTLVMLVISYTIGFLTSLSISAICTNGMvRGGGAYYAVSRSIGPEMGGSIGFIFYVGQILNTGMNIsGFVEPV 183
                  56799*************************************************************************66666665555541678999 PP

  AA_permease 101 iqfwelvtdlpkawvt.........gavflvvlliinlvgvkvygeaefilalikiiaiiafiivgiillaggkpnkgagfrflgdngsifknnlppg 189
                  i++++ ++    + +           +v+l++ + ++ +g   +++a+  l++i+i++ i+  i  + +   ++p+ +  + f+g ++s+f +nl ++
   EPX74020.1 184 IGLVGKNSGTVLKLIPegfwwnftyTTVVLILCCSLCCLGSATFARASNALFIIIILSTISIPISAVLVRPFKNPSLD--LYFTGVKLSTFVDNLRSS 279
                  999987666663333377779**9999999999999999999******************999999544444444444..8999************** PP

  AA_permease 190 fa.keeegafknfisvfvivvfaftGielvaiiagEvkdPeksiPkailqvviritifYvlsllligllvprndlgllndsasaaspfvifikesgvs 286
                  ++ + ++    +f s f ++++a +G +++a ++g++k P+++iPk++l  +++++++Y+ ++l+ig+ v r+ l +  +++              +s
   EPX74020.1 280 YTkDLNSNLQESFKSTFGVFFPATAGLLAGASMSGDLKAPSRAIPKGTLTSLFTTFLLYLTVILCIGASVTRSGLLFDMEVL------------EHIS 365
                  **8888888899************************************************************9977666444............67** PP

  AA_permease 287 vlaplinaviltaalssansslysasRvlyslakdglaP...kvlkkvskrgvPlraillsmiisllal...llaslnlaapivfnfllaisaligli 378
                  + + li+ +il++  +s+  +++ a ++l++ a+d+l+P    ++k+++++  P rai+l+++i +++l   +     l+  i+++fll   ++i+l+
   EPX74020.1 366 LHPLLIISGILASGAFSSFMGIFGAAKLLQAIARDDLIPglfLFAKGSEQQDIPFRAIFLTYVITQVSLywdI---NMLSSMITMTFLL-TFGFINLA 459
                  *****************************************999*************************4431...2222224555555.56****** PP

  AA_permease 379 vwlliilsylrfRkalkyqgrsieelgfkaallplgvilvlaaliiillilalyayltvkkgpkdwgaasfaaaylivllfliilvgvklhvknkrpq 476
                  ++ll + s ++fR++++  +r +  +g  + +++++ i  + a++++l++  l+ ++ +  +pk+wg +s+   y+++  +l+  +  k ++k +rpq
   EPX74020.1 460 CLLLRLSSTPNFRPTFSFFNRFTTGFGCALSFGIMFYIDQINAFVSFLIAGLLIFVIYFTSPPKNWGDVSQGIIYHQLRKYLLHTNKTKENIKYWRPQ 557
                  **********************************************999999988888889************************************9 PP

  AA_permease 477 ll 478
                  +l
   EPX74020.1 558 IL 559
                  87 PP

>> AA_permease_2  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.8  37.1   3.4e-22   1.5e-18      29     417 ..     108     534 ..      85     548 .. 0.77

  Alignments for each domain:
  == domain 1  score: 66.8 bits;  conditional E-value: 3.4e-22
  AA_permease_2  29 gpa.lilwvwiavligslavllvyaElssa.lprsgGiyvytkaafgkkvaflsawfnwfayvpvlasilsvaasyllnalgp......dlqgn.t 115
                    g + +++ ++i+  ig+l+ l  +  +++  + r gG+y  +++ +g+ ++   ++++ +++++ +   +s +++  ++++g+      +l ++  
     EPX74020.1 108 GVLkTLVMLVISYTIGFLTSL-SISAICTNgMVRGGGAYYAVSRSIGPEMGGSIGFIFYVGQILNTGMNISGFVEPVIGLVGKnsgtvlKLIPEgF 202
                    333266677777777754444.444455556*********************************66666677*********986667774444332 PP

  AA_permease_2 116 wltyliaiaililvalinirgikesakiqnilgilkillpliiliilglitvdgggfssl...............stetdtffpngwpgvllglli 196
                    w  +    ++lil++ ++++g  + a++ n l+i+ il ++ i i ++l+   ++ + +l               s  t+  ++n   ++ +++++
     EPX74020.1 203 WWNFTYTTVVLILCCSLCCLGSATFARASNALFIIIILSTISIPISAVLVRPFKNPSLDLyftgvklstfvdnlrSSYTKDLNSNLQESFKSTFGV 298
                    222444589****************************98888877666666666666655999889988888888777778999999999****** PP

  AA_permease_2 197 vlwsfdGfesaanvsee..vkkkdvpkaifigllivlvlyllvniaflgvvpddeianlsnlgsvaalffeavggkvvaiivv.ilialsllgain 289
                    ++ +++G  + a++s    ++ + +pk++  +l ++++lyl v + + + v+ +++    +    ++++ + +     + +++  +i  s +++ +
     EPX74020.1 299 FFPATAGLLAGASMSGDlkAPSRAIPKGTLTSLFTTFLLYLTVILCIGASVTRSGLLF--D----MEVLEHISL----HPLLIiSGILASGAFSSF 384
                    *****************766679********************888888888888876..3....555666644....444440445558888999 PP

  AA_permease_2 290 tavigssrvlealardgvlP..rffakvn.kfgspiraiiltaivslillllfllassaaynfllsvsslgliisyllliigalilrkkrphlkr. 381
                    + ++g++ +l+a+ard+ +P    fak + ++ +p+rai+lt++++++ l  +      ++n+l+s+ ++ +++ ++++ +++l+lr  +    r 
     EPX74020.1 385 MGIFGAAKLLQAIARDDLIPglFLFAKGSeQQDIPFRAIFLTYVITQVSL--Y-----WDINMLSSMITMTFLLTFGFINLACLLLRLSSTPNFRp 473
                    99******************99777777779***************9864..3.....379**************************776655441 PP

  AA_permease_2 382 .pgk........................ilvaiigalfllfllvalffppkgpatqssliy 417
                     + +                        + v++++a +l+f+++++  p +  ++++++iy
     EPX74020.1 474 tFSFfnrfttgfgcalsfgimfyidqinAFVSFLIAGLLIFVIYFTSPPKNWGDVSQGIIY 534
                    2222334444445555555566556655556666666666666666655555666666666 PP

>> SLC12  Solute carrier family 12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.6   0.0   1.6e-10     7e-07       4      87 ..     571     656 ..     569     671 .. 0.87
   2 !   15.9   0.1   1.1e-06    0.0051     261     306 ..     768     814 ..     762     825 .. 0.89
   3 !   10.5   0.1   4.9e-05      0.22     319     417 ..     929    1034 ..     921    1043 .. 0.74

  Alignments for each domain:
  == domain 1  score: 28.6 bits;  conditional E-value: 1.6e-10
       SLC12   4 LvdlahlitknvsLlicghvvkeklsqklreel...tkkaqkwLkkrkikaFyalvdaesleegakaLlqasGlgklkpnilllGyk 87 
                 ++ +++++ k+ sL i ghv+ +k  q   eel   ++  ++++ +r ik+F  l+ a +   g++ L+ ++Glg ++pni +l + 
  EPX74020.1 571 IIRFCNSL-KKGSLYILGHVIVSKDFQASMEELrrqQQLWHEFILERDIKGFVDLTVAPDEVWGIRGLISSAGLGGIRPNIAVLTFI 656
                 57788887.678***********9999999888665666778899************************************999885 PP

  == domain 2  score: 15.9 bits;  conditional E-value: 1.1e-06
       SLC12 261 lpyilstrkkw.kecklRvFalankkeeleeeqremaslLskfridy 306
                 l  il t  +w + c lR  ++ ++++e+++e++++++lL+ fr++ 
  EPX74020.1 768 LSWILHTSPEWkQGCTLRLLTIVEHENEIKAEKESLEQLLETFRMKA 814
                 67899******778******************************985 PP

  == domain 3  score: 10.5 bits;  conditional E-value: 4.9e-05
       SLC12  319 pkketvkeFeeliepfrlkeeskeeeeaeklk...itdeelealkeKtnrqlrlrElLkehSskanLivmsLPvprkga....vsaalYmaWLevLt 408 
                  pk +   ++++l  p+  + + ++++e+++++   ++d+   +  +   +++ ++E++keh +++++    LP p+ ++      +  Y+  L +  
  EPX74020.1  929 PKLNRFCSHNSLETPYDTQPQMSDSSEHQSMEnedLDDNFSFNNLSSRAQYIIMNEMIKEHTQDTAVLFTVLPAPHAKTyqnfTKSEQYVDDLLIFM 1025
                  56666667788888888888877777777776666777755555555567999**********************9765111145677888888888 PP

       SLC12  409 kdlpPvlLv 417 
                  k+lpP+ L+
  EPX74020.1 1026 KGLPPCGLI 1034
                  888888776 PP

>> Fn_bind  Fibronectin binding repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.48   2.2e+03       2      12 ..     920     930 ..     919     931 .. 0.85
   2 ?    9.5   1.9   0.00018      0.81       2      25 ..     939     963 ..     938     963 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.48
                 XXXXXX.XXXX CS
     Fn_bind   2 vIDiteDTqpg 12 
                 ++D+++D+ p 
  EPX74020.1 920 SVDDEYDSFPK 930
                 69******886 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00018
                 XXXXXX.XXXXXXXXXX--.B---- CS
     Fn_bind   2 vIDiteDTqpgmSGqnggt.tieED 25 
                 + ++ +DTqp+mS +++++  + ED
  EPX74020.1 939 SLETPYDTQPQMSDSSEHQsMENED 963
                 678899*******999999899998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1045 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       951  (0.0530426); expected 358.6 (0.02)
Passed bias filter:                      545  (0.0303977); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.78u 0.31s 00:00:01.09 Elapsed: 00:00:00.45
# Mc/sec: 6902.98
//
Query:       EPX74021.1  [L=185]
Description: hypothetical protein SOCG_03236 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-20   71.7   0.4      6e-20   71.1   0.4    1.3  1  Mhr1      Transcriptional regulation of mitochondrial recombi


Domain annotation for each model (and alignments):
>> Mhr1  Transcriptional regulation of mitochondrial recombination
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.1   0.4   3.3e-24     6e-20       2      83 ..       6      93 ..       5      95 .. 0.94

  Alignments for each domain:
  == domain 1  score: 71.1 bits;  conditional E-value: 3.3e-24
        Mhr1  2 eqiyvfrnletgqVvYSltrvleknkalkqlpfvgkkqv.......paklRkDlWkplavvefpkgeagvsvyqkLrelrklrelewek 83
                + +y+fr+++t+qV++S+++vl+  ++l qlpf++k+q        p+ +RkD+W p++ ++f++ ++ +s++ +L ++r++r +++ +
  EPX74021.1  6 KSLYLFRHIQTNQVLFSMKQVLK-PTQLFQLPFAKKEQStapygmrPPRIRKDHWVPILKADFENDQVVTSIMSQLLNYRRYRSIQPLD 93
                679**************999999.88999*********999888888************************************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       474  (0.0264376); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.28s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1338.22
//
Query:       EPX74022.1  [L=472]
Description: autophagy specific phophatidylinositol 3-kinase complex subunit Atg14 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      4e-10   39.3   4.4    4.9e-10   39.0   2.5    1.9  1  Atg14     Vacuolar sorting 38 and autophagy-related subunit 1
     0.0017   18.3   0.0      0.005   16.8   0.0    1.7  2  APG6      Apg6 BARA domain
  ------ inclusion threshold ------
        3.9    7.7  14.4        1.2    9.4   5.0    3.6  3  Cor1      Cor1/Xlr/Xmr conserved region


Domain annotation for each model (and alignments):
>> Atg14  Vacuolar sorting 38 and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.0   2.5   8.2e-14   4.9e-10      77     291 ..     245     441 ..     196     457 .. 0.70

  Alignments for each domain:
  == domain 1  score: 39.0 bits;  conditional E-value: 8.2e-14
       Atg14  77 adlrerlqelkdklsqlkkeieekkkklaklsdklkkRrsdleslqneleerrkkqiaklqdaikrieqklsslssktlesrsslcselaklyglrrts 175
                 +++++  ++     ++l++  ++kk+++a++ ++l    +++    ++l  r ++  a    ++k + +++ +++ +++++ +s ++ l+ +y++r   
  EPX74022.1 245 QLQNR-QSKYLFAFHKLRDDFAKKKEQIAHNHSQL----ETHYTFMKQLDDRYQEAYA----QVKMQWETNLQVRILIAHATRSHIKDLCTVYPIRT-- 332
                 33222.22233345556666666666666666665....2323334444444444444....4445555556789999999****************.. PP

       Atg14 176 yergkwvfskngeseesytIggiplpdlrdlnafpaeeIsasLsyiaqLlaLvshyLsirLPaeltlphscqpi....rplfiekslpkls.petesef 269
                        ++        +tI +  l  +  +n++p+ e++a+L+++a+L+  +s yL  + P++++  +s+++i    +p + ++  p +   +    f
  EPX74022.1 333 -------ID---DQVPLFTIRN--LRFSLVPNSIPPAELAAALGFLAHLTFGISRYLEYNFPYPVSPTGSRSTIvdplSPDLMNRCFPLYPaARALHAF 419
                 .......11...2345556665..5567889*****************************************99999988888888888889999999* PP

       Atg14 270 legvalLayniawLcrtqgvns 291
                  +++ lL++ni+ L ++ g+  
  EPX74022.1 420 EHALYLLNQNIVSLLAHYGLPN 441
                 *************999888866 PP

>> APG6  Apg6 BARA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1      0.66   3.9e+03     114     146 ..     261     290 ..     213     314 .. 0.55
   2 !   16.8   0.0   8.4e-07     0.005      18      92 ..     338     412 ..     324     447 .. 0.76

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.66
        APG6 114 leclkqlaekvekedkelelPYkikkdkdkigd 146
                  + + + +e++++++++le  Y+  k   +++d
  EPX74022.1 261 RDDFAKKKEQIAHNHSQLETHYTFMK---QLDD 290
                 33333333444445556666666633...3444 PP

  == domain 2  score: 16.8 bits;  conditional E-value: 8.4e-07
        APG6  18 kfgtInglrLGrlpsekvewsEinAAlGqtvlLLatiaeklnlkfqeyklvplGstSkiekleeksee....vlelyss 92 
                 ++ tI +lr+  +p+ +++  E  AAlG ++ L   i++ l+++f  y + p Gs S+i      s +     ++ly  
  EPX74022.1 338 PLFTIRNLRFSLVPN-SIPPAELAAALGFLAHLTFGISRYLEYNF-PYPVSPTGSRSTIVD--PLSPDlmnrCFPLYPA 412
                 5669******99887.6999***********************99.59***********54..3333322335555544 PP

>> Cor1  Cor1/Xlr/Xmr conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.16   9.7e+02      26      48 ..      37      59 ..      28      65 .. 0.79
   2 ?    9.4   5.0    0.0002       1.2      73     115 ..     237     279 ..     184     282 .. 0.87
   3 ?    1.7   1.3     0.048   2.9e+02      31      59 ..     280     308 ..     276     310 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.16
        Cor1 26 eqvwktqqeerqklkeeysqqfl 48
                +++wk qq+ r ++++   + fl
  EPX74022.1 37 QDLWKRQQQLRYAISQGILHVFL 59
                6899***9999888876666555 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.0002
        Cor1  73 qqqqkllqqarvvqeqrlkeikqlydqFlksledLekehekll 115
                  ++  +l+q ++ q++ l ++++l+d+F k+ e++ ++h++l 
  EPX74022.1 237 SKRLFFLSQLQNRQSKYLFAFHKLRDDFAKKKEQIAHNHSQLE 279
                 55556799*******************************9975 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.048
        Cor1  31 tqqeerqklkeeysqqfltlfqqwetdvq 59 
                 t+   +++l+++y++ + ++  qwet++q
  EPX74022.1 280 THYTFMKQLDDRYQEAYAQVKMQWETNLQ 308
                 56666899999**************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (472 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       953  (0.0531541); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 3126.56
//
Query:       EPX74023.1  [L=360]
Description: endocytosis regulator [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.6e-55  185.6   0.0    1.1e-54  185.1   0.0    1.2  1  LDB19       Arrestin_N terminal like
    1.9e-05   24.7   0.3    9.1e-05   22.5   0.1    1.9  2  Arrestin_N  Arrestin (or S-antigen), N-terminal domain


Domain annotation for each model (and alignments):
>> LDB19  Arrestin_N terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  185.1   0.0   1.2e-58   1.1e-54       1     193 []      63     242 ..      63     242 .. 0.98

  Alignments for each domain:
  == domain 1  score: 185.1 bits;  conditional E-value: 1.2e-58
       LDB19   1 lklklvkkvhvkkpfvadlsaiqtCsaCktkteelksWdlqkntkdlkvGsysyPfsylipGslpassslgsnaetkvkyeliavvvykdptprkgass 99 
                 lkl+l +k++v +p       +++C +C ++te l+ W + +ntk + +G++++Pfs+l+pG+lpa+ s   ++++ v+y+l+a+ +y  +t ++g s+
  EPX74023.1  63 LKLQLKQKISVYHP------PVSHCYECGGSTEVLQEWLFISNTK-FPSGTHHWPFSWLFPGTLPATLS---TRHIGVEYYLEATFCY--ATSDGGLSP 149
                 689***********......89**********************9.*********************99...****************..89******* PP

       LDB19 100 skeellklamPikvkravlrgPdknslrvfPPtelvatavlPsvvyPksafplelkleGvsegd.rrWrlrkltWrieettrikshaCdkhkhel 193
                  k+e++k+  P+++kra ++g d++++r+fPPt+lva++++ s+++P++ +++e++++G+ + d  +W + ++tWr+ee+ + + ++Cd+hk+++
  EPX74023.1 150 YKPEIMKY--PLELKRAFVPGSDTIHKRIFPPTDLVANITMSSILHPHTVALMEITMTGFLQADgSEWGVTRVTWRLEEHLNYTPRPCDRHKDTV 242
                 ****9998..******************************************************99**************************976 PP

>> Arrestin_N  Arrestin (or S-antigen), N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.1     1e-08   9.1e-05      84     123 ..      99     138 ..      90     144 .. 0.93
   2 ?   -0.6   0.0      0.14   1.3e+03      41      96 ..     216     271 ..     211     278 .. 0.79

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 1e-08
                 HHHHHH-TTEEEEEE---TTS--SECSGEEEEEEEEEEEE CS
  Arrestin_N  84 qekLpkGehafpFsfelPknlpsSfeGkaggvrYevkvtl 123
                 ++k+p+G+h +pFs  +P  lp ++  ++ gv+Y++++t+
  EPX74023.1  99 NTKFPSGTHHWPFSWLFPGTLPATLSTRHIGVEYYLEATF 138
                 6789*******************************99985 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.14
                 EEEEESSSSTTTTCCCEEEEEEEEEEEEESTSSSSS.SSSSHHHHHHHH-TTEEEE CS
  Arrestin_N  41 gkartgweesevagktfrkdltlkkkqeyleteksllkskkdsqekLpkGehafpF 96 
                 g +r++w+ +e+ + t r +  +k+++ + +++++++ s++d q+  +  +h+f  
  EPX74023.1 216 GVTRVTWRLEEHLNYTPRPCDRHKDTVRFRTVQEKKILSAQDLQSGWKFVDHQFFL 271
                 56788999999999999999999999999999999988888888776666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       255  (0.0142228); expected 358.6 (0.02)
Passed bias filter:                      240  (0.0133861); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.75
# Mc/sec: 1440.38
//
Query:       EPX74024.1  [L=301]
Description: zf-FYVE type zinc finger protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-15   56.4   9.8    4.5e-15   55.5   9.8    1.4  1  FYVE      FYVE zinc finger
  ------ inclusion threshold ------
       0.35   11.1  13.0       0.71   10.1  13.0    1.5  1  zf-AN1    AN1-like Zinc finger


Domain annotation for each model (and alignments):
>> FYVE  FYVE zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.5   9.8     5e-19   4.5e-15       2      66 ..     162     232 ..     161     234 .. 0.92

  Alignments for each domain:
  == domain 1  score: 55.5 bits;  conditional E-value: 5e-19
                 ---...--SB-TT..T--B--SSS--EE-TTT--EE-STTS-EEE.EE....GGGTEEEEEEE-HHHHHHH CS
        FYVE   2 kwkddsevkkCei..CakkFsllrrrhhCrlCGkvvCekCssklvall....ekeaeeksvrvCkeClael 66 
                 +wk+d+e+  C    C+++F l++rrhhCr+CG+v+C+++++ +v+l+     + +++k  r C +C++++
  EPX74024.1 162 HWKPDAEAIVCAFpsCSARFGLFERRHHCRCCGDVFCSAHCNRSVPLTfdvrFSLSASKLFRACVSCFYDY 232
                 8**********9888**************************99999888888888999999*******986 PP

>> zf-AN1  AN1-like Zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1  13.0   7.9e-05      0.71       1      28 [.     172     202 ..     172     206 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 7.9e-05
      zf-AN1   1 CsfksCkkkdflp...fkCryCgkvFClkHr 28 
                 C+f+sC+ +  l     +Cr Cg vFC+ H 
  EPX74024.1 172 CAFPSCSARFGLFerrHHCRCCGDVFCSAHC 202
                 **********888889**************5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (301 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       857  (0.0477997); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.28s 00:00:00.76 Elapsed: 00:00:00.45
# Mc/sec: 2001.13
//
Query:       EPX74025.1  [L=440]
Description: translation elongation factor EF- Tu Tuf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      5e-58  195.9   0.4    6.8e-58  195.4   0.4    1.2  1  GTP_EFTU     Elongation factor Tu GTP binding domain
    3.5e-26   91.7   0.0    7.5e-26   90.6   0.0    1.6  1  GTP_EFTU_D3  Elongation factor Tu C-terminal domain
    3.7e-18   65.7   1.4    8.9e-18   64.5   1.4    1.7  1  GTP_EFTU_D2  Elongation factor Tu domain 2
    5.3e-05   23.3   0.1     0.0001   22.4   0.1    1.4  1  MMR_HSR1     50S ribosome-binding GTPase
  ------ inclusion threshold ------
      0.017   14.7   0.2      0.046   13.3   0.1    1.7  2  cobW         CobW/HypB/UreG, nucleotide-binding domain
      0.068   13.0   0.0       0.15   11.9   0.0    1.6  1  Alba         Alba
      0.098   12.4   0.4         10    5.8   0.0    2.4  2  PduV-EutP    Ethanolamine utilisation - propanediol utilisati


Domain annotation for each model (and alignments):
>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  195.4   0.4   2.6e-61   6.8e-58       1     193 [.      52     244 ..      52     245 .. 0.96

  Alignments for each domain:
  == domain 1  score: 195.4 bits;  conditional E-value: 2.6e-61
                 TCEEEEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHHHHHSTHCHSHHHHHHTSCSSCEEEEEETTCSSEEEEEEEESSSGGGHHHHHHHHHT-SEEEE CS
    GTP_EFTU   1 krirnigiighvDhGKtTLtdrLlyktgaiskkgekaeeervlDtlkeErergiTiksaaisleketkkylinliDtPGHvdFskevirglrvlDgavl 99 
                 k+++nig+ighvDhGKtTLt ++++ + +  +++  +   +++D+++eE++rgiTi+sa++++e  t++++++++D+PGH+d++k++i+g++++Dga++
  EPX74025.1  52 KPHVNIGTIGHVDHGKTTLTAAITKGLAQLGQASFMDY--SQIDKAPEEKARGITISSAHVEYE--TANRHYAHVDCPGHADYIKNMITGAATMDGAII 146
                 579**************************999777665..57**********************..********************************* PP

                 EEETTTBSTHHHHHHHHHHHHTTTE.EEEEEESCGSTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEBTTTTB..........THHHHHHH CS
    GTP_EFTU 100 vvdaveGvepqteevlrlalkegvp.iivfiNKmDrlkaelkeiveevkqklsrkeeklekygekgekevpvvfgSalkge..........gvktllea 187
                 vv+a++G +pqt+e+l la+++gv+ i+v iNK+D+++ ++ e+ve+  ++l      l++yg++g+ ++p++ gSal +            +++l++a
  EPX74025.1 147 VVSATDGQMPQTREHLLLARQVGVKdIVVYINKADMVEPDMIELVEMEMREL------LSEYGYDGD-NTPIISGSALCALedrnpeiglqSITKLMDA 238
                 ****************************************************......********6.************999999998888889**** PP

                 HHHHSH CS
    GTP_EFTU 188 lvellp 193
                 +++++ 
  EPX74025.1 239 VDSYVS 244
                 *99975 PP

>> GTP_EFTU_D3  Elongation factor Tu C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.6   0.0   2.9e-29   7.5e-26       2     111 ..     342     438 ..     341     439 .. 0.92

  Alignments for each domain:
  == domain 1  score: 90.6 bits;  conditional E-value: 2.9e-29
                  -EEECCEEEEEEESSS.....SS-BSTT-EEEEESSS-EEEEEEEEEEECCSSTTSB-BSS-SSCCSTT-CEEEEEEECCEEEE--TTTHCCCCEEEE CS
  GTP_EFTU_D3   2 ikphtkfeAqvyileke...rhtpitagYrpvlyirtadvtgkvveLlskldkktekvsekkpefvkpGdnvivevelikpialekgseypqlGrFai 96 
                  + ph+kf+A+ yil+ke   r+t ++++Yrp+l+ rt+dvt+   eL   +++ ++++     ++++pGdn+++ ++l +pi++ekg+      rF++
   EPX74025.1 342 VAPHRKFKASFYILTKEeggRRTGFVDNYRPQLFTRTSDVTV---EL---THPDPNDS----DKMIMPGDNIELVCNLVHPIVVEKGQ------RFTV 423
                  789*************************************99...88...33334444....78************************......**** PP

                  ECTTCEEEEEEEEEE CS
  GTP_EFTU_D3  97 ReggrTvaaGvvtei 111
                  Reg++Tv++  +tei
   EPX74025.1 424 REGKNTVGTALITEI 438
                  *************99 PP

>> GTP_EFTU_D2  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.5   1.4   3.5e-21   8.9e-18       1      73 [.     268     336 ..     268     337 .. 0.95

  Alignments for each domain:
  == domain 1  score: 64.5 bits;  conditional E-value: 3.5e-21
                  EEEEEEEEEESEEETTEEEEEECTCTTSEEEEEEEEEEEEETEEESEEETTSEEEEEEEESSCCSGSSTTCEE CS
  GTP_EFTU_D2   1 GtvalgrvysGtlkkGdevrilgndtskkeivtrissletfhededeavaganaGvivaikgledaiivGdtl 73 
                  Gtv++grv++GtlkkG e+++ g ++   +i+t+++++e+f++++d avag+n+G++++ ++ ++ +++G+++
   EPX74025.1 268 GTVVTGRVERGTLKKGAEIELAGYGS---HIKTTVTGIEMFKKQLDAAVAGDNCGLLLRSVKRDE-LKRGMIV 336
                  9********************88655...889*********************************.9***987 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.1     4e-08    0.0001       2     114 .]      57     179 ..      56     183 .. 0.76

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 4e-08
                 EEEEESTTSSHHHHHHHHHT................STEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEE CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltg................ekaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseekglgkaflaleeadlillvvd 84 
                 ++ +G+   GK+tL  a+t+                +ka  ++  g T+   + ++++ ++++  vD+pG  +       +++ +     +d +++vv+
  EPX74025.1  57 IGTIGHVDHGKTTLTAAITKglaqlgqasfmdysqiDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHAD------YIKNMITGAATMDGAIIVVS 149
                 889****************88888888888887654489999999***********9999**********333......45566666666899999999 PP

                 TTTTCSHHHHHHHHHHHHHTTSEEEEEEES CS
    MMR_HSR1  85 aseeklkpldeeleelleeakkplilvlnk 114
                 a+++++ + +e+l   ++   k++++++nk
  EPX74025.1 150 ATDGQMPQTREHLLLARQVGVKDIVVYINK 179
                 885556555555544433355566666665 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.97   2.5e+03       9      22 ..      63      76 ..      57      99 .. 0.75
   2 ?   13.3   0.1   1.8e-05     0.046     104     166 ..     133     195 ..     122     202 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.97
                TTCCHHHHHHHHHC CS
        cobW  9 lGsGKTtLlnhlle 22
                +  GKTtL  ++++
  EPX74025.1 63 VDHGKTTLTAAITK 76
                55699999887775 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 1.8e-05
                 HHHHHCCCECEEEEEEETTTH.CCHCCHHHHHHHHHHTSSEEE.EE-HHHHCHC..HHHHHHHH CS
        cobW 104 eelksdltldavvavvDaknleaeeekieekaedqlaaadllv.lnKtDlldeeallekleerl 166
                 + ++ ++t+d+ + vv+a+  +  +++++ ++ +q+ + d++v +nK+D+++ + ++e +e ++
  EPX74025.1 133 NMITGAATMDGAIIVVSATDGQMPQTREHLLLARQVGVKDIVVyINKADMVEPD-MIELVEMEM 195
                 56788999**********999999****************99879******988.335555554 PP

>> Alba  Alba
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0     6e-05      0.15      28      53 ..     284     309 ..     231     314 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 6e-05
                 SEEEEEEETTHHHHHHHHHHHHHHHT CS
        Alba  28 eeVvlkatGraIskAvsvaeilkrrf 53 
                  e+ l ++G +I+++v+  e++k+++
  EPX74025.1 284 AEIELAGYGSHIKTTVTGIEMFKKQL 309
                 69**********************98 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0     0.004        10       6      23 ..      59      76 ..      55      93 .. 0.85
   2 ?    4.2   0.1     0.013        33      37     116 ..     118     196 ..     104     203 .. 0.71

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.004
   PduV-EutP  6 liGkvgsGKttLtqalkg 23
                 iG+v+ GKttLt a+++
  EPX74025.1 59 TIGHVDHGKTTLTAAITK 76
                69***********99975 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.013
   PduV-EutP  37 sdeviDtPGeylenrklysalivtsaeadvialvqdateeesvfppgf....asvfnkeviGiitkidlaedeenieaveelLk 116
                 + + +D+PG       + + +i+ +a  d   +v++at+ +   + +     ++v  k+++  i k+d++ + + ie ve +++
  EPX74025.1 118 HYAHVDCPGH----ADYIKNMITGAATMDGAIIVVSATDGQMPQTREHlllaRQVGVKDIVVYINKADMV-EPDMIELVEMEMR 196
                 4567999994....56667777778888877777777776655554431121456678999999999999.8899999987775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (440 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       402  (0.0224218); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 3170.17
//
Query:       EPX74026.1  [L=93]
Description: U6 snRNP-associated protein Lsm3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-18   66.3   0.1    1.8e-18   66.0   0.1    1.2  1  LSM       LSM domain
  ------ inclusion threshold ------
      0.058   13.5   0.1      0.091   12.9   0.1    1.3  1  DUF150_C  RimP C-terminal SH3 domain


Domain annotation for each model (and alignments):
>> LSM  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.0   0.1     2e-22   1.8e-18       4      67 .]      15      90 ..      12      90 .. 0.93

  Alignments for each domain:
  == domain 1  score: 66.0 bits;  conditional E-value: 2e-22
                HHTTTSEEEEEETTSEEEEEEEEEEETTSEEEEEEEEEEETTET............EEEEEEEEEEEGGGEEEEEE CS
         LSM  4 kklinkkvtvelkngrelrGtLkgfDqfmNlvLedveetlkdkk............ekrklglvliRGnnivlisl 67
                + +++++v+v+l+++rel G+L+++D+++N+vL d+ee+++  +              ++++++++RG++++li +
  EPX74026.1 15 RLSLDENVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIITIIDeeetatgkafkhIRKHYEMLFVRGDSVILIAP 90
                6689************************************999999*********88888899**********975 PP

>> DUF150_C  RimP C-terminal SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1     1e-05     0.091      10      48 ..      17      61 ..      15      74 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1e-05
    DUF150_C 10 flGelVkvklklpvegrkkftGkivevd.........eet.itlevdgk 48
                +l+e+V vkl+    g +++ G++ ++d         +e+ it++ +++
  EPX74026.1 17 SLDENVYVKLR----GDRELNGRLHAYDehlnmvlgdAEEiITIIDEEE 61
                5899*******....*************999999987555366665544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       456  (0.0254337); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 699.61
//
Query:       EPX74027.1  [L=252]
Description: ribosomal protein subunit L15 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      5e-27   95.1   0.7    6.6e-27   94.7   0.7    1.1  1  Ribosomal_L27A  Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27


Domain annotation for each model (and alignments):
>> Ribosomal_L27A  Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.7   0.7   3.7e-31   6.6e-27       1     127 [.      55     181 ..      55     182 .. 0.95

  Alignments for each domain:
  == domain 1  score: 94.7 bits;  conditional E-value: 3.7e-31
                     GGGGTSSTTTTTTTTT-S--......S--.........---.GGG..---EEEEHHHHHHTTTTGTTS------EEEGGGTTTTSSS.....SEE CS
  Ribosomal_L27A   1 kGktgGrGhkGqkkrsgvkkkpgfeGGqmplyrrlpkrGfk.nskfkkeykvvnlkdLdelideerleladeaeeidleelaeaglikk.kdgvK 93 
                     kGkt+ rGhkG+ +r+g   kpgfeGGq+p+++ +pk G + ++   k+y ++ l+++  +i ++rl   d++++i +++l +++++++ kdgv 
      EPX74027.1  55 KGKTSARGHKGSGQRRGRRIKPGFEGGQTPITKLFPKIGRStREI--KNYVPLGLGRVHAWIRSGRL---DSSKPILMKQLLDSRCCRGiKDGVE 144
                     6***************9999*******************995545..********************...5679********************* PP

                     EE--S...---.--EEEESEE-HHHHHHHHHTT-EEE CS
  Ribosomal_L27A  94 vlgkg...eltkklkvkaskfSkkAkekIeaaGGkve 127
                     ++++g   el+ ++++++ k++k+A+e +e+aGG+v 
      EPX74027.1 145 LVADGkaeELNIPIHIEVTKATKEAIECVEKAGGTVK 181
                     ****98889999***********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (252 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       401  (0.022366); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.44
# Mc/sec: 1721.83
//
Query:       EPX74028.1  [L=220]
Description: nucleolar protein Nop52 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-62  210.4   4.4    3.3e-62  210.1   4.4    1.1  1  Nop52     Nucleolar protein,Nop52


Domain annotation for each model (and alignments):
>> Nop52  Nucleolar protein,Nop52
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  210.1   4.4   1.8e-66   3.3e-62       1     211 [.       5     204 ..       5     208 .. 0.91

  Alignments for each domain:
  == domain 1  score: 210.1 bits;  conditional E-value: 1.8e-66
       Nop52   1 sklakkLasndkktRdkalksLrkfLskkkkkklselellkLwkGLFycmWmsDkplvQqelaeeLaelvkslkskeaalkFlkafwetmsreWkgiDk 99 
                 s+++kkLa+nd+ktRd+al sL+kfLs+kkk  +++l++lkLwkGLFycmWmsDkpl+Qq+la++La lv+ ++ +++ + F  +fwetm reW giD 
  EPX74028.1   5 SPFIKKLAANDRKTRDEALASLQKFLSRKKK--FERLDFLKLWKGLFYCMWMSDKPLYQQKLADNLAGLVSIVH-EDNRMLFQATFWETMGREWAGIDI 100
                 58***************************85..9****************************************.6*********************** PP

       Nop52 100 lRlDKfllLvRrvlreslkllkk.....eewdkelveeylevlketplssedkkvpnglayhladiyldelekvleseleeeeeeedeeevplekllep 193
                 lR +Kf+lL+Rr++++++  +kk     e+  ++lv++y+e+ ++ p+++++ ++png+ +hladi+++el+k++++++++            + ++ p
  EPX74028.1 101 LRTNKFYLLMRRFCAAAFLDIKKrgsseEK-LNKLVAQYNEMWMSVPFNPSNLSYPNGILFHLADIWTEELTKTFDEDVPK------------AAWYLP 186
                 *********************995544222.347889************************************88876554............578899 PP

       Nop52 194 fvkllkkskskallkkik 211
                 f +l +++k+ +l+k++ 
  EPX74028.1 187 FDSLRTTTKNTVLKKTLP 204
                 999999999988888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       479  (0.0267165); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.27s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1569.67
//
Query:       EPX74029.1  [L=227]
Description: clathrin light chain [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.2e-54  183.3  13.2    8.1e-54  183.1  13.2    1.0  1  Clathrin_lg_ch  Clathrin light chain
     0.0062   16.0   0.5     0.0087   15.5   0.5    1.2  1  FliD_C          Flagellar hook-associated protein 2 C-terminu
  ------ inclusion threshold ------
        2.6    7.5  10.8        2.1    7.8   8.7    1.8  2  CENP-K          Centromere-associated protein K


Domain annotation for each model (and alignments):
>> Clathrin_lg_ch  Clathrin light chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  183.1  13.2   1.4e-57   8.1e-54       3     230 .]       2     220 ..       1     220 [. 0.89

  Alignments for each domain:
  == domain 1  score: 183.1 bits;  conditional E-value: 1.4e-57
  Clathrin_lg_ch   3 DkFpsledegaeteasaaaeedpaadFLarekaelgdda.qfateqdeealleaeeeeddllgaaaangeedeeidefesqfpaieaadeqvape 96 
                     ++Fp+led +a  ++++++++++ adFL+rek +lg+da qf + +d++ l          lg +   +++++e d+fe++fp i+++++    +
      EPX74029.1   2 SQFPALEDFDAGLGSASQDKSEQPADFLEREKLALGEDAnQFGAVEDKDSL----------LGVG---KDSETEKDDFEKNFPPIDTEMQP---S 80 
                     78*****66666666778899999**************8888888887775..........4433...3577899**********977765...6 PP

  Clathrin_lg_ch  97 gtites.....eess.saeeeeeeepesirkWReerkkeieerdeasekkkeetkekAkkeiddfyenynekkektkaqnrkeeeeflkerddts 185
                     gti+++     ++++ +  e+e e++e+i+kW+e ++ +i+e++eas++  e+ +ekA+k+iddfyenyn+kk+k +a+ r e++++l +++  s
      EPX74029.1  81 GTISAPrapymAQAEvHPPEQETEDSEPIQKWKEANERRIREKQEASRRLYESNVEKARKAIDDFYENYNDKKDKIIAKSRDEQKKLLDKNEAVS 175
                     77777777675333379999*************************************************************************** PP

  Clathrin_lg_ch 186 pgGteWeRvakLvdfnpkssksgkdksRfrelLlsLKqdekaPga 230
                     +g t+W+R+ kLvd+++k+++s++ ++Rf elL+sL +de+aPga
      EPX74029.1 176 SGTTSWQRILKLVDLSEKTENSSHSVKRFHELLISLAKDESAPGA 220
                     *******************************************97 PP

>> FliD_C  Flagellar hook-associated protein 2 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.5   1.5e-06    0.0087      46     104 ..     132     187 ..     120     220 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.5e-06
                 EC-SCCCCCCHCHHHHHHHHCCCCCCCCCS..-----XXXXXXXXTTTTXHHHHHHHHH CS
      FliD_C  46 etDtdkikealkeFVdaYNalvteinektkekedeikdeekaksGaLrgdstlrnilsq 104
                 e++++k+ +a+ +F ++YN+  ++i++k++   de+k+   +++++  g  + ++il+ 
  EPX74029.1 132 ESNVEKARKAIDDFYENYNDKKDKIIAKSR---DEQKKLLDKNEAVSSGTTSWQRILKL 187
                 689***************************...68888888888888887777777654 PP

>> CENP-K  Centromere-associated protein K
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.21   1.2e+03     100     133 ..      16      49 ..      11      70 .. 0.78
   2 ?    7.8   8.7   0.00036       2.1      61     150 ..     108     196 ..     101     215 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.21
      CENP-K 100 siiqsknkklkedLkrEqewleeqqeilesLkek 133
                 s+ q k ++ ++ L+rE+  l e  + + +++ k
  EPX74029.1  16 SASQDKSEQPADFLEREKLALGEDANQFGAVEDK 49 
                 5678899999999999999998888777776655 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.00036
      CENP-K  61 eleqwekktpeiislneevllalgkeelqklksqLelvlsiiqsknkklkedLkrEqewleeqqeilesLkektkelkkqvvafsektrk 150
                  +++w++ +   i  ++e    l +++++k ++ ++++ +  + k++k+ ++ + Eq+ l +++e+++s + + +++  + v +sekt  
  EPX74029.1 108 PIQKWKEANERRIREKQEASRRLYESNVEKARKAIDDFYENYNDKKDKIIAKSRDEQKKLLDKNEAVSSGTTSWQRIL-KLVDLSEKTEN 196
                 589*********************************************************999999999999888876.45666666544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1599  (0.0891851); expected 358.6 (0.02)
Passed bias filter:                      563  (0.0314016); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 1577.62
//
Query:       EPX74030.1  [L=758]
Description: peptide-transporting ATPase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-51  176.1   7.0    1.5e-51  175.7   7.0    1.2  1  ABC_membrane  ABC transporter transmembrane region
    1.6e-30  106.4   0.0    5.1e-30  104.8   0.0    1.9  2  ABC_tran      ABC transporter
    7.7e-05   22.2   0.0    0.00012   21.6   0.0    1.2  1  SMC_N         RecF/RecN/SMC N terminal domain
  ------ inclusion threshold ------
       0.15   12.3   0.1        2.1    8.6   0.1    2.4  1  AAA_22        AAA domain


Domain annotation for each model (and alignments):
>> ABC_membrane  ABC transporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.7   7.0   3.3e-55   1.5e-51       2     269 ..     186     458 ..     185     463 .. 0.98

  Alignments for each domain:
  == domain 1  score: 175.7 bits;  conditional E-value: 3.3e-55
                   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSTCCHH.....HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTHHHHH CS
  ABC_membrane   2 iliillailagvlsplfplvlgrildtlldkgdpet.....ealnvysllllllglaqfilallqsyllnvtgerlskrlrrklfkkilrqpmsffd 93 
                   +++  l++++  +s+ +p+  g+ild  ++++++ +       ++++++ ll+l+l+ +i+++++ ++l  ++e++++rlr++lf k+l+++ +ffd
    EPX74030.1 186 FIAAALLLISSSISMSIPYAVGKILDAGSSSAESGFteimgIPSSKFYMGLLGLFLIGSICNFGRIFTLRLLSENIISRLRSRLFAKCLSLDGRFFD 282
                   788999***********************9888888************************************************************* PP

                   HSCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTH CS
  ABC_membrane  94 tnsvGellsrltndvsklrdglgeklglffqslltfvgglivmfylgwkltlvllailpliilvsaviakilkklkkkeqkavakassvaeEslsgi 190
                   ++  G+++srlt+d s +  +l++ l++ ++s ++ v+g+++m+y++  lt  +  i+p i+l +++++  ++kl++k q+a++++++v eE l ++
    EPX74030.1 283 SHLHGDIISRLTTDSSIVGKSLSTYLSDGLRSTVSAVTGIAMMLYTSLTLTGYMSLIVPPIALGAFFYGEYVRKLSRKTQDALGDLTRVSEERLANV 379
                   ************************************************************************************************* PP

                   HHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSTHHHHHHHHHHHHH CS
  ABC_membrane 191 rtVkafgreeyflekfekaleeakkagikkaianglligitqllgllsyalalwfGttlvisgelsvgdlvvflslfai 269
                   rt +af +e+++++++++++++  + ++k a+a g+++g t ++g++ ++++l +G+ +v +g+++vg+l  fl++  +
    EPX74030.1 380 RTTQAFLGERQEVHRYNNYIRNLFNLAKKEALAGGFFFGSTGFCGNATVIAILALGGKMVAAGDITVGQLSSFLLYTVY 458
                   *************************************************************************999765 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       1.8     8e+03     105     124 ..     173     192 ..     102     193 .. 0.51
   2 !  104.8   0.0   1.1e-33   5.1e-30       2     137 .]     529     676 ..     528     676 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.8
                 TSGGS-HHHHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 105 spssLSgGqkqrvalarall 124
                 s   L +Gq +   +a+all
  EPX74030.1 173 SILVLAKGQGKNFFIAAALL 192
                 33567778877777777775 PP

  == domain 2  score: 104.8 bits;  conditional E-value: 1.1e-33
                 EEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH.........HHHTCHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxxx RF
    ABC_tran   2 knvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren.........esdeeiekalsk 91 
                 k++s+++++g  +aiv  +G GKSt+ +ll++ ++p +G+il +g+d+++ + +++r+++gv+ qep lf ++ +r+n         +++ e++++++ 
  EPX74030.1 529 KDLSFEIQPGMNIAIVAASGGGKSTVSQLLLRFYDPISGKILANGTDISTFNVQQWRRNFGVVGQEPVLFTGT-IRDNiaygnpdatQEEIEAAAMRAD 626
                 89***********************************************************************.********99855444445555555 PP

                 STTGG....TTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 xxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  92 lglke....lkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137
                  g ++    + dt v++++ +LSgGqkqr+a+arall+ p +l+lDE+t+
  EPX74030.1 627 CGFIYtfpdTWDTQVGTRGLQLSGGQKQRIAIARALLRTPAFLILDEATS 676
                 5555587778899999999*****************************96 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   2.7e-08   0.00012     135     208 ..     302     717 ..      99     724 .. 0.72

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 2.7e-08
                 T.................................................................................................. CS
                 x.................................................................................................. RF
       SMC_N 135 e.................................................................................................. 135
                 +                                                                                                  
  EPX74030.1 302 Kslstylsdglrstvsavtgiammlytsltltgymslivppialgaffygeyvrklsrktqdalgdltrvseerlanvrttqaflgerqevhrynnyir 400
                 055555555555555555555555555555666666666666666666666666666666666666666666666666666666666666666666666 PP

                 ................................................................................................... CS
                 ................................................................................................... RF
       SMC_N 136 ................................................................................................... 135
                                                                                                                    
  EPX74030.1 401 nlfnlakkealaggfffgstgfcgnatviailalggkmvaagditvgqlssfllytvyaggsiiglsgcftdimkglgaagrlfdlldsvpkvvpstgl 499
                 677777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 PP

                 ................................................................................................... CS
                 ................................................................................................... RF
       SMC_N 136 ................................................................................................... 135
                                                                                                                    
  EPX74030.1 500 pvpstirksvltfdkvgfayptrpksaifkdlsfeiqpgmniaivaasgggkstvsqlllrfydpisgkilangtdistfnvqqwrrnfgvvgqepvlf 598
                 777777777777777788888888888888888888888888888888888888888888888888888888888888888888888888888899999 PP

                 ................................................CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHH CS
                 ................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 136 ................................................lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkek 186
                                                                 +LSgG+k+ +a+a        +  ++ +lDe  +aLD +    v + +++ 
  EPX74030.1 599 tgtirdniaygnpdatqeeieaaamradcgfiytfpdtwdtqvgtrglQLSGGQKQRIAIARA----LLRTPAFLILDEATSALDGEAEVMVNRTIQAL 693
                 999999999999999999999999999999999999999999999999*******98887644....467788**************999999999966 PP

                 CTT..SEEEEE-SSHHHCCC-SCE CS
                 xxx..xxxxxxxxxxxxxxxxxxx RF
       SMC_N 187 skn..aQfivislreemlekadkl 208
                  +n  +  i i+++  +++ ad +
  EPX74030.1 694 MQNrnMTTITIAHKLATIRSADLI 717
                 555227788888888888888765 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.1   0.00047       2.1       7      71 ..     540     642 ..     535     710 .. 0.55

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00047
      AAA_22   7 ilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdl.lrellralglelka.................................. 70 
                  +++++ sG GK+t+ + ll+ +d          ++    l+++t+ +++  ++  r++g+ + +                                  
  EPX74030.1 540 NIAIVAASGGGKSTVSQLLLRFYD----------PISGKILANGTDISTFnVQQWRRNFGVVGQEpvlftgtirdniaygnpdatqeeieaaamradcg 628
                 589*****************9984..........22233333344444444444444444444444444444444444444444455555555555555 PP

      AAA_22  71 .............e 71 
                               
  EPX74030.1 629 fiytfpdtwdtqvG 642
                 66666655555541 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (758 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       736  (0.0410508); expected 358.6 (0.02)
Passed bias filter:                      510  (0.0284455); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.77u 0.29s 00:00:01.06 Elapsed: 00:00:00.50
# Mc/sec: 4573.15
//
Query:       EPX74031.1  [L=464]
Description: hsp90-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-39  136.1   6.7    1.3e-39  136.1   6.7    3.0  3  CDC37_N    Cdc37 N terminal kinase binding
    7.2e-38  129.1   0.3    7.2e-38  129.1   0.3    2.2  3  CDC37_M    Cdc37 Hsp90 binding domain
    1.1e-23   83.2   0.2    1.1e-23   83.2   0.2    3.0  2  CDC37_C    Cdc37 C terminal domain
  ------ inclusion threshold ------
       0.03   14.7   2.4       0.03   14.7   2.4    2.4  2  E2F_CC-MB  E2F transcription factor CC-MB domain
        0.2   11.4   4.9       0.45   10.3   4.9    1.6  1  DUF4718    Domain of unknown function (DUF4718)
        1.2    9.5  14.3        2.3    8.5   1.2    2.8  2  DUF2951    Protein of unknown function (DUF2951)


Domain annotation for each model (and alignments):
>> CDC37_N  Cdc37 N terminal kinase binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.1   6.7   4.3e-43   1.3e-39       2     129 .]       3     124 ..       2     124 .. 0.92
   2 ?   -1.0   7.5       1.1   3.2e+03      57     119 ..     139     206 ..     123     236 .. 0.57
   3 ?   -1.9   0.2         2   5.9e+03      91      91 ..     376     376 ..     325     440 .. 0.56

  Alignments for each domain:
  == domain 1  score: 136.1 bits;  conditional E-value: 4.3e-43
     CDC37_N   2 ldYskWDklELSDDsDievHPNVDkrsfirwKqrdihekreqrkaeikklklereindkllkridkllealkekeveeeevvfkalnesleekkekedk 100
                 +dYskWDklELSDDsDievHPNVDk+sfirw+qrdihekr  rk++++++k+  ++n+kl+ ri+++ + l++++ +e    + +l++ l ++k +ed+
  EPX74031.1   3 IDYSKWDKLELSDDSDIEVHPNVDKKSFIRWRQRDIHEKRSIRKQKMEDIKSALTMNEKLKDRISQMYSYLQKDSPSE---PLPYLSSFL-QSKREEDS 97 
                 9***********************************************************************999999...678888888.55666677 PP

     CDC37_N 101 pkaekeeeqptydemleklldqvkkelke 129
                 ++a   e  ++y++ml +lld++kk+++e
  EPX74031.1  98 EQAI--EGGMSYHQMLVALLDTIKKAIEE 124
                 7666..789****************9875 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 1.1
     CDC37_N  57 indkllkridkllealkekeveeeevvfkalnesl.....eekkekedkpkaekeeeqptydemlekl 119
                   ++ +kr+d+l+ + k++ +e e+ + k+++++       +++ ++++++++k+++q++  +++e+l
  EPX74031.1 139 HLQSHEKRLDNLMVNAKKEYDELESESKKYITSEDlhigfDSTHVQKKEEEQQKKKKQKESVQVIESL 206
                 34455667777776666555555333333333332234433333333333333234444444555554 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 2
     CDC37_N  91 l 91 
                 +
  EPX74031.1 376 T 376
                 1 PP

>> CDC37_M  Cdc37 Hsp90 binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1       1.1   3.2e+03      25      36 ..     143     154 ..     126     174 .. 0.61
   2 ?   -3.1   0.0       2.4   7.2e+03      46      60 ..     188     202 ..     170     218 .. 0.59
   3 !  129.1   0.3   2.4e-41   7.2e-38       1     118 []     248     359 ..     248     359 .. 0.98

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 1.1
     CDC37_M  25 seqqkdaLlmea 36 
                  e+  d L+++a
  EPX74031.1 143 HEKRLDNLMVNA 154
                 366666666666 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 2.4
     CDC37_M  46 kkakqvvhqslllqy 60 
                 ++ ++  +q + +q 
  EPX74031.1 188 EEQQKKKKQKESVQV 202
                 333333334444444 PP

  == domain 3  score: 129.1 bits;  conditional E-value: 2.4e-41
     CDC37_M   1 kFakiklgdykkseefllkhpeils.eqqkdaLlmeafdaqlegkekkakqvvhqslllqyireLaklnkeglknviklFfkkiktkshqakklFledv 98 
                 kF++i +gdy++se+fl++h +il+ e+++d++l+eaf+a+legk   akq+vhq+ll++y+r+L      g+  +i++Ff+++++++hqa++lFledv
  EPX74031.1 248 KFSQIAFGDYSASESFLKDHLHILAqESESDSILLEAFNAELEGKPWLAKQYVHQALLINYCRQL------GP-SGITIFFQRVQDPNHQARRLFLEDV 339
                 7***********************99***************************************......99.9************************ PP

     CDC37_M  99 eetynriktRakiikkeqee 118
                 ++ty+ri++R++++++eq++
  EPX74031.1 340 QNTYSRIHERSHAMANEQAQ 359
                 *****************975 PP

>> CDC37_C  Cdc37 C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -6.2   7.9         6   1.8e+04      82      89 ..     184     191 ..     115     204 .. 0.65
   2 !   83.2   0.2   3.7e-27   1.1e-23       2      76 ..     382     456 ..     381     461 .. 0.97

  Alignments for each domain:
  == domain 1  score: -6.2 bits;  conditional E-value: 6
     CDC37_C  82 keleeekk 89 
                 ++ eee++
  EPX74031.1 184 QKKEEEQQ 191
                 22222222 PP

  == domain 2  score: 83.2 bits;  conditional E-value: 3.7e-27
     CDC37_C   2 lPdadsedpeeqkkvevFeklppelqkAlktksLdevnkvlakmkveeAeeilellgeagilsleellvdattee 76 
                 +P++d  +pe ++++  Fe++pp+lq+Al+t++Ld++n vl+km+ve+Aee++e+l+  g+ls+ee+++d t+ e
  EPX74031.1 382 IPEKDAVEPELKAARMTFESFPPNLQRALETNNLDKINSVLGKMSVEDAEEVVEKLSSTGMLSIEEGIIDTTKGE 456
                 799*********************************************************************988 PP

>> E2F_CC-MB  E2F transcription factor CC-MB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.1       2.7   8.1e+03      59      59 ..      52      52 ..      26      80 .. 0.56
   2 ?   14.7   2.4     1e-05      0.03       3      46 ..     135     175 ..     133     184 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 2.7
   E2F_CC-MB 59 i 59
                i
  EPX74031.1 52 I 52
                1 PP

  == domain 2  score: 14.7 bits;  conditional E-value: 1e-05
   E2F_CC-MB   3 qelesleeeeqkLDelieklteqlknltedeknqlaYvtyedir 46 
                 q +++l+++e++LD+l+ +++++  +l++++k+   Y+t+ed++
  EPX74031.1 135 QYIKHLQSHEKRLDNLMVNAKKEYDELESESKK---YITSEDLH 175
                 7899***********************999999...******96 PP

>> DUF4718  Domain of unknown function (DUF4718)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   4.9   0.00015      0.45      54     128 ..     155     229 ..     139     273 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00015
     DUF4718  54 rsskaklkahsqcvfisrnfhtGrlqlqeekrkkeeaeikaikdhskeefcladkkviedpeetsvaakssvatl 128
                 +    +l ++s+    s ++h+G   + ++k++ e++++k  k+  ++   l+d++   + e++s a+ ssva  
  EPX74031.1 155 KKEYDELESESKKYITSEDLHIGFDSTHVQKKEEEQQKKKKQKESVQVIESLNDPSPFAQHENASQAQSSSVAGK 229
                 4445678889999999********9999999999999999999999******************99999998764 PP

>> DUF2951  Protein of unknown function (DUF2951)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   1.2   0.00076       2.3       6      55 ..      28      77 ..      24      81 .. 0.91
   2 ?    4.9   5.9      0.01        31       7      65 ..     141     197 ..     135     206 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00076
     DUF2951  6 kheqewrlrrleendktmlekldeikdslktqekvyikldktleelrkek 55
                k    wr r + e+     +k+++ik +l  +ek+++++ + +  l+k+ 
  EPX74031.1 28 KSFIRWRQRDIHEKRSIRKQKMEDIKSALTMNEKLKDRISQMYSYLQKDS 77
                55668******************************************985 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.01
     DUF2951   7 heqewrlrrleendktmlekldeikdslktqekvyikldktleelrkekeideknkkkn 65 
                 + +e rl  l  n k  +++l+   +   t e+++i +d t   ++k+ e+++k+kk++
  EPX74031.1 141 QSHEKRLDNLMVNAKKEYDELESESKKYITSEDLHIGFDSTH--VQKKEEEQQKKKKQK 197
                 35889******************99999**********9985..555555544444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (464 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2365  (0.131909); expected 358.6 (0.02)
Passed bias filter:                      559  (0.0311785); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.64u 0.29s 00:00:00.93 Elapsed: 00:00:00.43
# Mc/sec: 3240.92
//
Query:       EPX74032.1  [L=504]
Description: CCR4/nocturin family endoribonuclease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.9e-31  109.4   0.0    2.5e-31  109.0   0.0    1.2  1  Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family


Domain annotation for each model (and alignments):
>> Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.0   0.0   1.4e-35   2.5e-31       1     233 []     127     494 ..     127     494 .. 0.86

  Alignments for each domain:
  == domain 1  score: 109.0 bits;  conditional E-value: 1.4e-35
                    EEEEESTG..........CHHHHTHHHHHHHHHHHHHHCTTSEEEEEEEBSCTCHHHHHHHHH.TTCEEEEECCHECSSSTTSSEEEEEECSTEEE CS
                    xxxxxxxx..........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos   1 ltwNvngq..........aspalgssrrsdrladlltaydaDvlgLQEvdddelsriplllal.ggflgasstsptgggggggnggavlsrfplts 85 
                    +t+Nv+ q          +   l++ +rs+ l ++++ y +Dv ++QEvd      +  +l++ +  +  s       + g+++g  +++r +l++
     EPX74032.1 127 MTYNVLAQtnirrsmfphSGETLKWKNRSKVLENEFKYYVPDVGCMQEVDAEFIPSFYKPLMEgM-GYDLSF----QAAKGKTHGILIFWRTSLFQ 217
                    8*****************8888**************************99999888888888852.333333....3789**************** PP

                    EEEEEEEETSSSSGCEEEEEEEEEEEEEEE..................CCCHHGHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-SSSTSGGGBS CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos  86 lfrrtfiefndlvaalrreplaakleqlni..................ashrdhdlvrdlqllalllqvealnadrgapvivaGDfNarpsdddsr 163
                     +  ++i+++d+ +   r +++  ++++                    ++++  +++ ++ +l+++  ++++ a++++pvi+aGDfN+ p+d  ++
     EPX74032.1 218 NIKVDVIYYDDHNELPGRMNTKNIGCCVSLqrtndlskgiflatthlfWHPYGSYERLRQGALLVKEVNAIAEAHQTWPVIIAGDFNTEPFDTNYP 313
                    ************************************************************************************************ PP

                    CGHHHHHHCTTTH................................................................H.................. CS
                    xxxxxxxxxxxxx................................................................x.................. RF
  Exo_endo_phos 164 vlrtrglalapap................................................................v.................. 177
                     ++t ++a ++++                                                                v                  
     EPX74032.1 314 AMTTKPFAICQRAtdiiersmnyvfgeselegkeeavtqpsitqsendsengtstatstastptpskkrilhvqnefVphyttfyeqhqknprlvs 409
                    *********************999999999999999998888888888888777777777777766666666655550555566666666777778 PP

                    ............SSCESCETTTTTTTTTTTEB-BEEEEEEC.HHHCCEEEEEEECCHHEEC................TSSCSSSB CS
                    ............xxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxx................xxxxxxxx RF
  Exo_endo_phos 178 ............glyllgggptptyvtraggsrlDrilasp.alalfrsgvlppplalvrr................ealtlSDH 233
                                ++ + + +p++t+++++++++lD+i+  + + +++ s     ++    +                e+ ++SDH
     EPX74032.1 410 lysygykhvdpeNAKNAFEHPAFTNWANTYQGHLDYIFLMDrNSTKEKSADEVIEGIKLKSllripkpsemkeaeplEGRYPSDH 494
                    888889999****************************999877777766666666655555777777777777777777777777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (504 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       853  (0.0475766); expected 358.6 (0.02)
Passed bias filter:                      514  (0.0286686); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.29s 00:00:00.85 Elapsed: 00:00:00.45
# Mc/sec: 3341.01
//
Query:       EPX74033.1  [L=660]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00076   19.3   0.0      0.063   13.1   0.0    3.8  4  KH_1      KH domain


Domain annotation for each model (and alignments):
>> KH_1  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0     0.026   4.7e+02      42      65 ..      68      95 ..      56      96 .. 0.74
   2 ?   -1.9   0.0      0.17     3e+03      41      58 ..     274     291 ..     226     296 .. 0.66
   3 ?   -3.0   0.0      0.39     7e+03      23      51 ..     330     362 ..     329     369 .. 0.73
   4 !   13.1   0.0   3.5e-06     0.063       3      36 ..     577     610 ..     575     624 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.026
                ......T.-EEEEEESHHHHHHHHHHHH CS
        KH_1 42 g....sderevtisGspeavekAkelie 65
                +     +e +++i G  e+v  Ak  i+
  EPX74033.1 68 DinisRNEIVIVIAGAYECVYSAKIYIL 95
                33444578899999****9***998886 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.17
                 ...T.-EEEEEESHHHHH CS
        KH_1  41 egsderevtisGspeave 58 
                 ++ +++ ++i G+ e+ +
  EPX74033.1 274 PELNSSKLVIAGESESLK 291
                 226777888888666665 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 0.39
                 HHHHHHHT-EEEEES.STT......T.-EEEEE CS
        KH_1  23 keIreetgakIkvpk.sedeg...sderevtis 51 
                 + I+ee     ++p+  ++++   ++++++ i 
  EPX74033.1 330 RLIMEENSSFLRFPDyFKEGKgscTENSQIKIY 362
                 678887788899997776666777777777775 PP

  == domain 4  score: 13.1 bits;  conditional E-value: 3.5e-06
                 EEEEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEE CS
        KH_1   3 rilvPsslvgriIGkgGsnIkeIreetgakIkvp 36 
                  + +P + + ++IG +G+ I++  + ++ +I + 
  EPX74033.1 577 HFFIPEEIHKKLIGFRGEQIQRVTKLYNSYIEFS 610
                 578**********************889999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (660 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       629  (0.0350828); expected 358.6 (0.02)
Passed bias filter:                      507  (0.0282782); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.28s 00:00:00.92 Elapsed: 00:00:00.46
# Mc/sec: 4321.14
//
Query:       EPX74034.1  [L=131]
Description: anaphase-promoting complex subunit Apc13 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.7e-26   92.3   0.4    2.3e-26   91.8   0.4    1.2  1  Apc13p         Apc13p protein
  ------ inclusion threshold ------
       0.13   12.4   0.0       0.24   11.5   0.0    1.5  1  Ribosomal_L50  Ribosomal subunit 39S


Domain annotation for each model (and alignments):
>> Apc13p  Apc13p protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.8   0.4   2.5e-30   2.3e-26       1      88 [.       1      86 [.       1      87 [. 0.98

  Alignments for each domain:
  == domain 1  score: 91.8 bits;  conditional E-value: 2.5e-30
      Apc13p  1 mDsefqyvhldashhailaeewnkdrLppddvavplekldpvrteeeedvvpddeaangnvkesqkekEpaWrdlnleeLesngpvvt 88
                mDs++   h++++ ++++a+ew+kd+Lp ddv+v+le+l+p+   e+e ++++++a+++ ++ +q ++EpaW+d++l++L+ ++++v+
  EPX74034.1  1 MDSNYCQIHMNQPRVVLFASEWRKDKLPIDDVEVRLEHLPPMP--EDELTIQHSSANLILMRSKQLRHEPAWKDMALDDLVDQFAFVQ 86
                9**************************************9999..999*************************************998 PP

>> Ribosomal_L50  Ribosomal subunit 39S
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   2.7e-05      0.24      25      55 ..      63      95 ..      43     101 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 2.7e-05
  Ribosomal_L50 25 a..kdegflqlsLeDlelKFaflkrlqqllghe 55
                   +  ++  +++++L+Dl+  Faf++  q++++  
     EPX74034.1 63 QlrHEPAWKDMALDDLVDQFAFVQGSQSQTEEA 95
                   1446889*********************99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       482  (0.0268838); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 962.74
//
Query:       EPX74035.1  [L=892]
Description: rho-type GTPase activating protein Rga4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.2e-42  144.4   0.1    9.1e-42  142.4   0.0    2.0  2  RhoGAP          RhoGAP domain
    5.5e-18   65.0  23.5    8.5e-09   35.5   7.2    2.4  2  LIM             LIM domain
    0.00049   20.5   1.0     0.0013   19.1   1.0    1.8  1  CENP-H          Centromere protein H (CENP-H)
     0.0072   16.8   0.6      0.027   14.9   0.3    2.2  2  ZapB            Cell division protein ZapB
  ------ inclusion threshold ------
      0.025   14.7   1.6      0.058   13.5   1.6    1.6  1  RasGAP_C        RasGAP C-terminus
      0.045   13.1   5.8      0.058   12.7   3.6    2.1  2  DUF3450         Protein of unknown function (DUF3450)
       0.34   11.0   3.5       0.99    9.5   0.2    2.5  2  Mst1_SARAH      C terminal SARAH domain of Mst1
        6.4    7.0  16.5        1.5    9.0   6.7    2.9  2  Fer4_9          4Fe-4S dicluster domain


Domain annotation for each model (and alignments):
>> RhoGAP  RhoGAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1      0.92   2.1e+03      21      55 ..     506     542 ..     494     557 .. 0.69
   2 !  142.4   0.0   4.1e-45   9.1e-42       1     149 [.     720     866 ..     720     869 .. 0.97

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.92
                 TTTS-S-HHHHHHHHHHHHHTGGGCT..TTTTSCHHH CS
      RhoGAP  21 iyRvsgskarvkelreafdkgkavds..dleeedvha 55 
                 + R  + +a+v +l++a+++ ++++   +++++++ +
  EPX74035.1 506 LLRRDALSATVTKLQNAYNTATEETAylNVKNTELAS 542
                 5677778889999999999988887555444444444 PP

  == domain 2  score: 142.4 bits;  conditional E-value: 4.1e-45
                 BHHHHHHHHHHHHHTTTSTTTTTS-S-HHHHHHHHHHHHHTGGGCTTTTTSCHHHHHHHHHHHHHHSSSTTTTGGHHHHHHHHHTSSSHHHHHHHHHHH CS
      RhoGAP   1 PiivekcvefiekrgldtegiyRvsgskarvkelreafdkgkavdsdleeedvhavaslLKrfLrelpepLltkelyeelieaaksedeeerlealkel 99 
                 P+ +  c++fie +gld eg+yR+sg ++++k++ + +++++ +     ++d+ av+s+LK++Lr+lp+p++t+e y ++i a + ++ +e+le l+ +
  EPX74035.1 720 PSLIPACINFIETYGLDYEGLYRKSGATSQMKRIWALLQEEDIT--LHPSDDICAVTSVLKQYLRNLPNPIITFEEYFSFIFAGSRTSFQEKLEGLRGV 816
                 788999******************************99999999..89*********************************99999************* PP

                 HTTS-HHHHHHHHHHHHHHHHHHHTHHHH---HHHHHHHHHHHHHT-TSS CS
      RhoGAP 100 lekLPkenrdtLryLlehLkrvaenskenkMtaknLaivfaPtLlrpkse 149
                 +e+LP+++  +Lr +++hL++va++s+en M++knLa+vf+PtL+r++++
  EPX74035.1 817 IERLPPVHSTILRLIIRHLSKVAKYSSENLMNSKNLAVVFSPTLIRDPEH 866
                 **********************************************9976 PP

>> LIM  LIM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.1   8.3   5.2e-12   1.2e-08       1      53 [.       9      62 ..       9      65 .. 0.88
   2 !   35.5   7.2   3.8e-12   8.5e-09       1      53 [.      66     116 ..      66     119 .. 0.92

  Alignments for each domain:
  == domain 1  score: 35.1 bits;  conditional E-value: 5.2e-12
                -TTT--BE-TTTEEEEETTEEEETTTSB-TTT-SB-CTT...CEEETTEEEEHHH CS
         LIM  1 CagCnkkiadrelvlkaldkvwHeeCFtCsdCqkeLkegs..fyekdgklyCkkd 53
                C +C ++++d+ +v +  +k wH +CFtC +C+k L++ s  ++  +g+lyC+++
  EPX74035.1  9 CFKCWNEVKDDLTV-STFGKIWHANCFTCNSCDKVLNSSSekYVFEQGNLYCNDC 62
                999******77777.8**********************9995556666*****99 PP

  == domain 2  score: 35.5 bits;  conditional E-value: 3.8e-12
                 -TTT--BE-TTTEEEEETTEEEETTTSB-TTT-SB-CTT.CEEETTEEEEHHH CS
         LIM   1 CagCnkkiadrelvlkaldkvwHeeCFtCsdCqkeLkegsfyekdgklyCkkd 53 
                 C++C+ +i +  ++  a  + +H++CFtC++C++ L+++ ++  +g++yC ++
  EPX74035.1  66 CSRCALSIHEITVM--AGVHAYHPSCFTCASCHNFLDSTAYAKSKGDMYCLSC 116
                 *********66666..9**********************9999999****998 PP

>> CENP-H  Centromere protein H (CENP-H)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   1.0     6e-07    0.0013       3      61 ..     504     562 ..     502     595 .. 0.86

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 6e-07
      CENP-H   3 plieqrdelssellklsqelrelqeeltevekenlrlkrknrelaaellelakekesek 61 
                  l+ +rd+ls ++ kl++++++++ee + ++++n +l   n++l +el  l++ ++s++
  EPX74035.1 504 TLLLRRDALSATVTKLQNAYNTATEETAYLNVKNTELASLNNQLERELSSLKESSQSKR 562
                 57789*******************************************88888877776 PP

>> ZapB  Cell division protein ZapB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       3.3   7.3e+03      12      27 ..     439     454 ..     437     469 .. 0.51
   2 !   14.9   0.3   1.2e-05     0.027       7      49 ..     517     559 ..     507     596 .. 0.67

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 3.3
        ZapB  12 kiqkaidtitlLqmei 27 
                 ++q ++ +++ Lq + 
  EPX74035.1 439 QVQDLVAEVSYLQTQR 454
                 3444444444444333 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 1.2e-05
        ZapB   7 eqLEskiqkaidtitlLqmeieeLkeeneelkeenreleeene 49 
                  +L++ +++a ++ + L  ++ eL   n++l++e   l+e+ +
  EPX74035.1 517 TKLQNAYNTATEETAYLNVKNTELASLNNQLERELSSLKESSQ 559
                 3566666666666666666666666666666666666665555 PP

>> RasGAP_C  RasGAP C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   1.6   2.6e-05     0.058      15      94 ..     479     567 ..     473     630 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 2.6e-05
    RasGAP_C  15 LeelgvisrennyqellneIakdirnkgrlrekrkeElesleetlktLseknnyle...sqlesYkayienvleqlkkkkgk......l 94 
                 Le++ v +  +++ +l+++   +i+++  +r+   + + +l+++++t  e ++yl+   ++l+s+++ +e+ l+ lk+++++      +
  EPX74035.1 479 LEQELVAKLTDRFDNLTKSFHSEITTLLLRRDALSATVTKLQNAYNTATEETAYLNvknTELASLNNQLERELSSLKESSQSkrkssfG 567
                 4555555899*********************************************63337899**********9998886222333441 PP

>> DUF3450  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.31     7e+02      35      76 ..     429     470 ..     401     482 .. 0.79
   2 ?   12.7   3.6   2.6e-05     0.058      38      89 ..     508     559 ..     473     565 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.31
     DUF3450  35 sqkkidklddekqellaeyralkeeleslevyneqlerlvas 76 
                 s++  d +dd+ q+l+ae+  l+++  +l ++ + l++  ++
  EPX74035.1 429 SSNVFDFSDDQVQDLVAEVSYLQTQRGALLLEISSLASFTDA 470
                 55666778999*************999999988888877665 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 2.6e-05
     DUF3450  38 kidklddekqellaeyralkeeleslevyneqlerlvasqeqeiasleeqie 89 
                 + d+l+   ++l++ y++++ee++ l+v+n +l++l +++e+e++sl+e+ +
  EPX74035.1 508 RRDALSATVTKLQNAYNTATEETAYLNVKNTELASLNNQLERELSSLKESSQ 559
                 6788999999**************************************9866 PP

>> Mst1_SARAH  C terminal SARAH domain of Mst1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.3      0.14   3.2e+02       4      30 ..     479     505 ..     476     509 .. 0.83
   2 ?    9.5   0.2   0.00044      0.99      15      39 ..     539     563 ..     536     564 .. 0.94

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.14
  Mst1_SARAH   4 LkflsvdeLqqrlasLDpeMEqEieel 30 
                 L +  v+ L++r+ +L++    Ei  l
  EPX74035.1 479 LEQELVAKLTDRFDNLTKSFHSEITTL 505
                 66666889****************987 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00044
  Mst1_SARAH  15 rlasLDpeMEqEieelrkrYqaKRq 39 
                  lasL +++E+E+  l++  q+KR+
  EPX74035.1 539 ELASLNNQLERELSSLKESSQSKRK 563
                 69**********************8 PP

>> Fer4_9  4Fe-4S dicluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   2.2     0.089     2e+02      28      43 ..      26      40 ..       6      42 .. 0.58
   2 ?    9.0   6.7   0.00067       1.5       5      43 ..      59      96 ..      57      98 .. 0.93

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.089
      Fer4_9 28 lraaseeaCigCgaCv 43
                 +++   +C++C++C 
  EPX74035.1 26 GKIWH-ANCFTCNSCD 40
                33344.48*****995 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00067
      Fer4_9  5 CgaCveaCpagvvvedaaerkarlraaseeaCigCgaCv 43
                C+ Cv+ C  ++ + ++ + +a ++a+   +C++C +C 
  EPX74035.1 59 CNDCVKTCSRCALSIHEITVMAGVHAYHP-SCFTCASCH 96
                9***********************99998.9*******7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (892 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1050  (0.0585643); expected 358.6 (0.02)
Passed bias filter:                      490  (0.02733); expected 358.6 (0.02)
Passed Vit filter:                        80  (0.00446204); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.70u 0.28s 00:00:00.98 Elapsed: 00:00:00.43
# Mc/sec: 6285.73
//
Query:       EPX74036.1  [L=347]
Description: hypothetical protein SOCG_03251 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0038   16.9   0.0       0.54    9.9   0.0    2.2  2  ApbA      Ketopantoate reductase PanE/ApbA


Domain annotation for each model (and alignments):
>> ApbA  Ketopantoate reductase PanE/ApbA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.0     3e-05      0.54      37     101 ..      45     111 ..       8     113 .. 0.70
   2 !    4.9   0.0    0.0011        19      49      83 ..     198     227 ..     176     234 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 3e-05
                 HHHCEEEEETTCEEEEEECEEECCH...SCCCCS-ESEEEE-SSGGGHHHHHHHHGGGECTCEEEEEE CS
        ApbA  37 kknGlrltseggeeilrppealsae...ekselepidlvivtvKayqteealeeikplldpntvvlll 101
                  +n l++++e+ +   +p+++       e ++++ id ++v    + t + ++ +kpll++n+ v++l
  EPX74036.1  45 ARNFLNIYKEDPSISDSPEKVGH-LeykEPEKMSTIDCLLVDSCITKTRKTIRHVKPLLHKNSSVIFL 111
                 45555555555333333333322.14677899*********************************998 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.0011
                 EEEEEECEEECCHSCCCCS-ESEEEE-SSGGGHHH CS
        ApbA  49 eeilrppealsaeekselepidlvivtvKayqtee 83 
                 ++ l+ p+++ +e     + +dl+++t+K++++ +
  EPX74036.1 198 KKDLLSPKQFLTE-----QICDLILLTTKSLPNPQ 227
                 4555555555555.....67**********98766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (347 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       265  (0.0147805); expected 358.6 (0.02)
Passed bias filter:                      236  (0.013163); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2466.44
//
Query:       EPX74037.1  [L=329]
Description: U3 snoRNP-associated protein Esf2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.1e-07   30.6   0.0    3.1e-05   23.7   0.0    2.8  1  RRM_1        RNA recognition motif. (a.k.a. RRM, RBD, or RNP 
  ------ inclusion threshold ------
      0.029   14.7   0.3      0.079   13.3   0.3    1.7  1  DCP2         Dcp2, box A domain
       0.17   12.1   0.0       0.48   10.7   0.0    1.7  1  DUF5133      Protein of unknown function (DUF5133)
       0.36   11.4   0.0       0.36   11.4   0.0    2.8  3  Host_attach  Protein required for attachment to host cells


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.0     7e-09   3.1e-05       1      68 [.     121     201 ..     121     203 .. 0.81

  Alignments for each domain:
  == domain 1  score: 23.7 bits;  conditional E-value: 7e-09
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEE............EEEEESSHHHHHHHHHHHTTEEETTEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgf............afVeFeskedAekAlealngkklggre 68 
                 ++++ +pp++  ++L++l+s++G+  +i l ++ +++++++             + VeFesk++A+   + ln +k+gg++
  EPX74037.1 121 IYLSKVPPYMEPSKLRQLLSQYGKLGRIYLAPEsAQKRARRLknggnkrtmyeeGWVEFESKRAAKTVADMLNTEKIGGKK 201
                 79999*************************999955554432222222223444*************************97 PP

>> DCP2  Dcp2, box A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.3   1.8e-05     0.079      32      65 ..     202     233 ..     199     257 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.8e-05
                 HHHHHHHTHHHHTTTS----HHHHHHHHHCCSCC CS
        DCP2  32 AhWfYeDfvreknpklpslklkeFaeklfekcpl 65 
                   W+Y D+++   + lp++k ++++e++ ++ + 
  EPX74037.1 202 TSWYYDDIWNM--KYLPKFKWHHLTEQIAAENAA 233
                 57*******99..56*************998744 PP

>> DUF5133  Protein of unknown function (DUF5133)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00011      0.48       6      36 ..     132     163 ..     129     166 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00011
     DUF5133   6 pavlrrllarYeal.rillaeradpearrrle 36 
                 p+ lr+ll++Y +l ri la ++ ++++rrl+
  EPX74037.1 132 PSKLRQLLSQYGKLgRIYLAPESAQKRARRLK 163
                 889********************999999997 PP

>> Host_attach  Protein required for attachment to host cells
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.4       1.2   5.2e+03      34      59 ..      33      49 ..       4      76 .. 0.44
   2 ?   11.4   0.0     8e-05      0.36      44      84 ..     158     194 ..     133     205 .. 0.77
   3 ?   -0.9   0.6      0.51   2.3e+03      27      27 ..     278     278 ..     226     328 .. 0.49

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 1.2
  Host_attach 34 rlkerelgsdrpgrsnesaggggrsa 59
                 r+  +  ++d+ g+          +a
   EPX74037.1 33 RATIQSSRNDKSGSG---------KA 49
                 222222222222222.........22 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 8e-05
  Host_attach  44 rpgrsnesaggggrsavdeetdpkeeeeerfarevadrLek 84 
                  r+ r ++  g g++  +  e+ + e e++r a++vad L++
   EPX74037.1 158 RARRLKN--G-GNKRTM-YEEGWVEFESKRAAKTVADMLNT 194
                  3333333..3.345555.7********************97 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.51
  Host_attach  27 e 27 
                  +
   EPX74037.1 278 T 278
                  1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (329 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1834  (0.102292); expected 358.6 (0.02)
Passed bias filter:                      532  (0.0296726); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2328.58
//
Query:       EPX74038.1  [L=2582]
Description: beige protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   1.9e-120  401.4   0.5   3.3e-120  400.6   0.5    1.4  1  Beach        Beige/BEACH domain
    1.5e-10   41.1   0.0    4.5e-10   39.5   0.0    1.9  1  PH_BEACH     PH domain associated with Beige/BEACH
    6.6e-07   29.9   1.0       0.19   12.7   0.1    4.4  3  WD40         WD domain, G-beta repeat
    1.6e-05   24.9   9.3    3.8e-05   23.7   9.3    1.7  1  FYVE         FYVE zinc finger
     0.0046   17.1   0.0      0.017   15.3   0.0    2.0  1  Laminin_G_3  Concanavalin A-like lectin/glucanases superfamil
  ------ inclusion threshold ------
       0.76   10.0   7.9        2.2    8.5   7.9    1.7  1  FYVE_2       FYVE-type zinc finger


Domain annotation for each model (and alignments):
>> Beach  Beige/BEACH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  400.6   0.5  1.1e-123  3.3e-120       1     276 []    1894    2176 ..    1894    2176 .. 0.97

  Alignments for each domain:
  == domain 1  score: 400.6 bits;  conditional E-value: 1.1e-123
       Beach    1 ekWqkgeisnfeYLmalNtlagRsfndlsqYpvfPwvlkdyeseeldledektyRdLskpigalneerleklkeryeelee....eepkflygshys 93  
                  ++W+++eisnf+YL ++NtlagR++ndl+qYpvfPwv++dy+seeld++++kt+RdLskp+ga+ + r++++kery+ l +    ++++f+yg+hys
  EPX74038.1 1894 KRWERHEISNFNYLQIVNTLAGRTYNDLTQYPVFPWVIADYTSEELDFKNPKTFRDLSKPMGAQYPPREAQFKERYDLLLNlgdlQQKPFHYGTHYS 1990
                  68****************************************************************************55566789*********** PP

       Beach   94 saaivlyylvRlePftelalelqsgkfdvadrlfksieeawesvt.esesdvkEliPeffylpefllnsnnldlglkq.e.ekvddVeLPpwakksp 187 
                  sa+iv++yl+Rl+Pf++  l lq+g+fd+adrlf sie++w+s++ e+++dv+EliPeffyl+e+++n n++d+g++q e + ++dV LPpwak++p
  EPX74038.1 1991 SAMIVCSYLIRLRPFVNSYLALQGGQFDHADRLFYSIEQTWKSSSkENMADVRELIPEFFYLSEMFVNGNGFDFGSRQnEtKPINDVILPPWAKGDP 2087
                  ********************************************96799**************************9974579*************** PP

       Beach  188 eeFvrihreaLeseyvsenLheWIDliFGykqrgeeavkaknvfhpltyegevdlekiedeeekkaieaqikefGqtPkqlfkkphpkr 276 
                    Fv+++reaLes+yvs++LheWIDliFGykqrg+eav+++nvfh+l+y+g+vdle+ie+e e +a+   i++fGqtPkq+fk+php+r
  EPX74038.1 2088 AIFVQKNREALESDYVSSHLHEWIDLIFGYKQRGQEAVESTNVFHNLSYQGSVDLENIENEFELAAAVGIIHNFGQTPKQVFKRPHPPR 2176
                  ***************************************************************************************97 PP

>> PH_BEACH  PH domain associated with Beige/BEACH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.5   0.0   1.5e-13   4.5e-10      42     100 .]    1786    1844 ..    1727    1844 .. 0.88

  Alignments for each domain:
  == domain 1  score: 39.5 bits;  conditional E-value: 1.5e-13
    PH_BEACH   42 tadkkkkdkewklseikevhlrrYlLrktAlEiFladrtsllfnFeskkerrkvlkalv 100 
                     ++++ ++w++s++  v +r YlLr++++E+F++d++s+l  + ++k+r++ +++lv
  EPX74038.1 1786 PIISRENGWHWNFSDLSLVLKRFYLLRDVGIELFFKDGRSFLTILSTTKNRDALYQKLV 1844
                  55678889************************************************985 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0     0.085   2.5e+02      10      37 ..    2269    2296 ..    2265    2297 .. 0.84
   2 !   12.7   0.1   6.4e-05      0.19       5      38 .]    2310    2344 ..    2307    2344 .. 0.87
   3 !    9.6   0.1   0.00057       1.7      22      37 ..    2424    2439 ..    2407    2440 .. 0.78

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.085
                  S.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   10 H.ssvtslafspdgawlasGsdDgtvriW 37  
                  H  ++t+l ++++ ++l + s D t+r+W
  EPX74038.1 2269 HsENITHLLNCDERTFL-TVSQDLTLRLW 2296
                  74449999999999998.5799******* PP

  == domain 2  score: 12.7 bits;  conditional E-value: 6.4e-05
                  EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40    5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38  
                  ++l GH + +ts+++++  + ++sG++ g+++iWd
  EPX74038.1 2310 KVLYGHrTKITSISVCKAFSIIVSGDESGSLMIWD 2344
                  6789**988****8777778899***********9 PP

  == domain 3  score: 9.6 bits;  conditional E-value: 0.00057
                  SSEEEEEETTSEEEEE CS
        WD40   22 gawlasGsdDgtvriW 37  
                  ++++++G++Dg vriW
  EPX74038.1 2424 KDLFLTGHEDGVVRIW 2439
                  344789********** PP

>> FYVE  FYVE zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   9.3   1.3e-08   3.8e-05       3      66 ..    2520    2576 ..    2518    2578 .. 0.86

  Alignments for each domain:
  == domain 1  score: 23.7 bits;  conditional E-value: 1.3e-08
                  --...--SB-TTT--B--SSS--EE-TTT--E.E-STTS-EEE.EEGGGTEEEEEEE-HHHHHHH CS
        FYVE    3 wkddsevkkCeiCakkFsllrrrhhCrlCGkv.vCekCssklvallekeaeeksvrvCkeClael 66  
                   ++d++++ C+ C+++Fsl++ r  Cr+CG+  vC++C s+l         ++++++C eC+++l
  EPX74038.1 2520 VERDATSDLCSLCDTRFSLMEWRSQCRACGNSnVCSDCISTLK--------NTNIKTCYECYRQL 2576
                  578999************************8549****99877........44688999999876 PP

>> Laminin_G_3  Concanavalin A-like lectin/glucanases superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   5.6e-06     0.017      12     122 ..     366     503 ..     354     514 .. 0.62

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 5.6e-06
  Laminin_G_3  12 aslptssfTvsaWvkpdslpsaaqiiis....sssdg.........rgfelgl..dgsg...rlrfsvnagngaee...........svtsgasvpag 80 
                     p+++++vs+W+    l+++   i++        +         ++  l++  d+s+   +++f ++a+n+++            s+   ++v a 
   EPX74038.1 366 LISPNTGYSVSLWLHSGCLSDD---IVNkrsvP---TtlflitdflKSPLLRVmvDPSTnsiSVHFGSYATNKGSCiinfctplttsSLKKFNNVKAS 457
                  3335888999999988888863...22111110...1233333344444444433433334455555555555333444444433336777779**** PP

  Laminin_G_3  81 eWtHvavtyd....ggtlrlYvNGvevgsatltggllsatsgplvi 122
                  +W  ++ ++     ++tl lY++G+ v+sa+ + ++++   +pl+i
   EPX74038.1 458 TWRLITLVHKneksSSTLELYIDGTFVESAPSSYPFIPSLLQPLYI 503
                  **********9987789*************9999977777788876 PP

>> FYVE_2  FYVE-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   7.9   0.00072       2.2      52     102 ..    2524    2574 ..    2513    2577 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00072
      FYVE_2   52 lgethCilCleefkllvnskrqCldC.klnvCkkCsvenkkekvwlCkiCse 102 
                   +++ C lC ++f l+ + + qC  C + nvC  C ++ k+ ++  C  C +
  EPX74038.1 2524 ATSDLCSLCDTRFSLM-EWRSQCRACgNSNVCSDCISTLKNTNIKTCYECYR 2574
                  56789********987.56789***95579*******************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2582 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       744  (0.041497); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.17u 0.31s 00:00:01.48 Elapsed: 00:00:00.47
# Mc/sec: 16569.31
//
Query:       EPX74039.1  [L=363]
Description: CK1/CK1/CK1-D protein kinase Hhp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.7e-26   91.7   0.0    5.5e-26   91.5   0.0    1.2  1  Pkinase         Protein kinase domain
    3.5e-15   56.0   0.0    7.2e-15   55.0   0.0    1.5  2  Pkinase_Tyr     Protein tyrosine kinase
    2.4e-10   39.8   0.1    2.4e-10   39.8   0.1    1.6  2  Pkinase_fungal  Fungal protein kinase
    5.7e-05   23.2   0.0     0.0024   17.8   0.0    2.5  3  APH             Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.076   12.8   0.1       0.12   12.1   0.1    1.3  1  Baculo_p24      Baculovirus P24 capsid protein


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.5   0.0   1.5e-29   5.5e-26       1     221 [.      11     232 ..      11     335 .. 0.84

  Alignments for each domain:
  == domain 1  score: 91.5 bits;  conditional E-value: 1.5e-29
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEE.SSEEEEEEE--TTEBHHHHHH.HHSS--H CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfee.kdelylvleyveggeladlle.rkgslse 97 
                 y+  +k+G+GsfG +y +++  +g++vA+K  +++ +  +    +  E ++ + l+    + ++++f    d+  +v++++   +l+dl +  +++++ 
  EPX74039.1  11 YRIGRKIGSGSFGDIYLGTNIVSGEEVAIKLESTRAKHPQ----LEYEYRVYRILSGGVGIPFVRWFGIeCDYNAMVMDLLGP-SLEDLFNfCNRKFTL 104
                 67899*************************8777766654....569*********777777777776516777899**9984.477777765678*** PP

                 HHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEE..TTTE.EEE-SGTTSEESSSSCS........BCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHH CS
     Pkinase  98 eeakkiakqilegleylHskgiiHrDlKpeNiLid..ekge.lKitDFGlakelesssk........ltsfvgtseYlAPEvlkeneyskkvDvWslGv 185
                 +++  +a q+++ +e++Hsk+++HrD+Kp+N+L+   ++g+ + ++DFGlak+++ +++         ++ +gt +Y +     + e s+  D+ slG 
  EPX74039.1 105 KTVLLLADQLISRIEFIHSKSFLHRDIKPDNFLMGigKRGNqVNVIDFGLAKKYRDHKThlhipyreNKNLTGTARYASINTHLGIEQSRRDDLESLGY 203
                 *********************************986555557***************99*******99***********9988899999********** PP

                 HHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCT CS
     Pkinase 186 ilyelltgkppfsgekgkekvekeldqlekilkilg 221
                 +l+ l  g+ p++g k  + +++++++      i++
  EPX74039.1 204 VLVYLCRGSLPWQGLKAAT-KKQKYEK------IME 232
                 *************655444.2333333......332 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.0   0.0     2e-18   7.2e-15       3     220 ..      13     229 ..      11     263 .. 0.84
   2 ?   -2.9   0.1      0.89   3.2e+03     225     246 ..     299     321 ..     286     332 .. 0.50

  Alignments for each domain:
  == domain 1  score: 55.0 bits;  conditional E-value: 2e-18
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTS CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekekl 100
                  +g+k+G+G+fG+++ gt       + ++Va+K  + +a++ + e  ++ ++i++       v+  g+    +   +v++++   +L++  +   ++k+
   EPX74039.1  13 IGRKIGSGSFGDIYLGTNI----VSGEEVAIKLESTRAKHPQLEYEYRVYRILSGGVGIPFVRWFGIEC--DYNAMVMDLLG-PSLEDLFNFC-NRKF 102
                  789**************99....8899*******99999998888888889999888888899999888..566899*9985.4677777776.778* PP

                  BHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE...TTEEEE-STTTHEETTTSSEE.....EETTSSTSGGGGS-HHHHHHSEEEHHHHHHH CS
  Pkinase_Tyr 101 tlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse...nkvvkisDfGLardiekddey.....vkkeeaklpvkWmapEslkekkftsksDvWs 190
                  tlk++l +a q+ + +e+++sk+++Hrd+   N L+     +++v + DfGLa++  ++++      +++++ +   ++ ++ +    + + + D  s
   EPX74039.1 103 TLKTVLLLADQLISRIEFIHSKSFLHRDIKPDNFLMGIgkrGNQVNVIDFGLAKKYRDHKTHlhipyRENKNLTGTARYASINTHLGIEQSRRDDLES 200
                  ***********************************97433388***********99666654455558888889999*******99999********* PP

                  HHHHHHHHHTTSSGTTTTSHHHHHHHHHHT CS
  Pkinase_Tyr 191 fGvllwEiftlgespypglkneevleklke 220
                   G +l  ++  g+ p++glk+++  +k+++
   EPX74039.1 201 LGYVLVYLCR-GSLPWQGLKAATKKQKYEK 229
                  *****99998.9***999976665555433 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.89
                  -BBTTSBHHHHHHHHHHT-.SSG CS
  Pkinase_Tyr 225 ekpekcpeelyelmkkcwe.edp 246
                  ++ ++ +++l++ +  + + ++p
   EPX74039.1 299 QQDQQNQQQLQDHLAASAQvASP 321
                  34444444444433333221344 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.8   0.1   6.6e-14   2.4e-10     324     408 .]     122     209 ..     102     209 .. 0.88
   2 ?   -2.2   0.2      0.37   1.3e+03     236     259 ..     295     323 ..     273     350 .. 0.44

  Alignments for each domain:
  == domain 1  score: 39.8 bits;  conditional E-value: 6.6e-14
  Pkinase_fungal 324 lkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddsses.....garertGTleFmaievlkgeeHsyrhDLESffyvllwic 408
                     + + +LHrDi  +N l+     +++++  +iD+ lak++ d++++      ++++ tGT+ + +i+   g+e s r+DLES+ yvl+++c
      EPX74039.1 122 HSKSFLHRDIKPDNFLMG--IGKRGNQVNVIDFGLAKKYRDHKTHLhipyrENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLVYLC 209
                     47889*************..7788999*************977776666665699*********************************99 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.37
  Pkinase_fungal 236 krkvvsssssqe.....lsskaevklkks 259
                     krk+++++++q+     l  +a+v++ ++
      EPX74039.1 295 KRKTQQDQQNQQqlqdhLAASAQVASPPE 323
                     22222222222223333222222222222 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0     0.034   1.2e+02      22      71 ..      36      84 ..      26      93 .. 0.79
   2 !   17.8   0.0   6.7e-07    0.0024     165     197 ..     123     156 ..     101     158 .. 0.88
   3 ?   -2.9   0.1       1.4     5e+03     217     232 ..     297     310 ..     282     321 .. 0.41

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.034
                -EEEEEE-TTS-HHHHHHHHHHHHHHHHTT-B--B-CTTBS-EEETTEEE CS
         APH 22 ryvlrrnpparaaeeirrevallrlLakagvpvPevlagdtddeeigllf 71
                +++ ++ +++  +++++ e++++r L++  v +P v +++  ++ + +++
  EPX74039.1 36 EVAIKLESTRAKHPQLEYEYRVYRILSGG-VGIPFVRWFGIECDYNAMVM 84
                667788888899***************66.55677888888887766655 PP

  == domain 2  score: 17.8 bits;  conditional E-value: 6.7e-07
                 -EEEE-SS-SGGGEEEC....TTEEEEE---TT-E CS
         APH 165 ptvllHgDlhpgNllvd..pddgrvtGviDfedag 197
                 ++++lH+D++p+N+l+   +++++v  viDf++a+
  EPX74039.1 123 SKSFLHRDIKPDNFLMGigKRGNQV-NVIDFGLAK 156
                 689***************9888888.9*****996 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 1.4
                 CCHCHHHHHHHHCS-H CS
         APH 217 dpeflaallrayeqea 232
                    ++++  ++ +  +
  EPX74039.1 297 KTQQDQQNQQQLQ--D 310
                 2222222222222..2 PP

>> Baculo_p24  Baculovirus P24 capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   3.5e-05      0.12      77     133 ..     256     325 ..     250     358 .. 0.58

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 3.5e-05
  Baculo_p24  77 ynlsds.ahppeyyvlkqLvrDLlvGaqseavdplkdiktqlctlqecleesnvlvn.............s 133
                 y+ s +   +p+y  l++L+rDL+  +q+  +d + d  ++ +t q+  ++++ + +             s
  EPX74039.1 256 YTRSLRfDDKPDYAYLRKLFRDLFC-RQNYEFDYMFDWTSKRKTQQDQQNQQQLQDHlaasaqvaspperS 325
                 4444444678*************97.566667777777666666666555444332244334444443331 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (363 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       903  (0.0503653); expected 358.6 (0.02)
Passed bias filter:                      480  (0.0267723); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 2657.18
//
Query:       EPX74040.1  [L=402]
Description: BRCT domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    0.00055   20.3   0.0     0.0011   19.3   0.0    1.5  1  BRCT_2         BRCT domain, a BRCA1 C-terminus domain
     0.0018   18.1   0.5     0.0049   16.7   0.1    1.9  2  RTT107_BRCT_5  Regulator of Ty1 transposition protein 107 BRC
  ------ inclusion threshold ------
      0.041   13.7   0.0        0.1   12.5   0.0    1.7  1  XET_C          Xyloglucan endo-transglycosylase (XET) C-termi
      0.047   14.1   0.1       0.18   12.2   0.1    2.1  1  BRCT           BRCA1 C Terminus (BRCT) domain


Domain annotation for each model (and alignments):
>> BRCT_2  BRCT domain, a BRCA1 C-terminus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   2.5e-07    0.0011      19      84 ..     172     247 ..     156     248 .. 0.81

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 2.5e-07
      BRCT_2  19 psreklkklIeknGGevveti....tsavyiviaesneee......laekrkrrvvspkyIkdCikkgkllpleny 84 
                  +r++l ++ ++ G  + + +    ++ +++++ ++n+         +++ + ++vsp++I +C + +k ++ + +
  EPX74040.1 172 LDRNTLIQQLTELGASIHQRPqfnkDDLTTHMVLPKNSCFnsvldtISSESTIKFVSPEWIAACYSTKKWVNESAF 247
                 699**************6666564344488888888887789999999999******************9998765 PP

>> RTT107_BRCT_5  Regulator of Ty1 transposition protein 107 BRCT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.69   3.1e+03      10      45 ..      35      69 ..      29      79 .. 0.76
   2 !   16.7   0.1   1.1e-06    0.0049      14     100 .]     156     249 ..     143     249 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.69
                   SSSXXX--EEEEESSS.TT..SSHHHHHHHHHTTEE CS
  RTT107_BRCT_5 10 kkskpevkiravlTgceeevnkedsdkkkLrklGik 45
                   ++++p +k +  +T++++++   ++  + L  +Gi+
     EPX74040.1 35 TNEEPILKQHQTVTNINRTH-RRHERVSSLDGVGIS 69
                   56667777788899998885.666678888888886 PP

  == domain 2  score: 16.7 bits;  conditional E-value: 1.1e-06
                    XX--EEEEESSS.TT..SSHHHHHHHHHTTEEE-S....GCCT.-SEEE-SS---SHHHHHHCCCTT..EEE-CHHHHHHHHHTS---SGGGB- CS
  RTT107_BRCT_5  14 pevkiravlTgceeevnkedsdkkkLrklGikivq....eakk.cntliApkilRTeKFLksLskap..kilspdfiedvLkkkklldleeyll 100
                     ++++  v   +++++   ++ +++L +lG +i+q    ++++ +++++ pk    +  L ++s ++  k++sp++i ++ ++kk ++++ +++
     EPX74040.1 156 FPLSMASVYVTIDDNMLDRNTLIQQLTELGASIHQrpqfNKDDlTTHMVLPKNSCFNSVLDTISSEStiKFVSPEWIAACYSTKKWVNESAFRI 249
                    44455444444444544777889************9999777779**********************9999***************99999975 PP

>> XET_C  Xyloglucan endo-transglycosylase (XET) C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   2.2e-05       0.1       9      30 ..     360     385 ..     348     386 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 2.2e-05
       XET_C   9 n....qeLdpkqrralrwvrknymiY 30 
                 +    ++L+p+qr++l+ ++k+y+ Y
  EPX74040.1 360 SatklSNLSPQQRKELESAKKKYLAY 385
                 1455679*****************99 PP

>> BRCT  BRCA1 C Terminus (BRCT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1     4e-05      0.18      12      78 ..     164     235 ..     154     236 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 4e-05
                 EEEESTSSHHHHHHHHHHHHTTCEE....ESSCSTTSSEEEESSS.HSHHHHHHHHHHTTSEEEETHHHHHH CS
        BRCT  12 vitgvldnftrdeleelikehGGkv....ttevskktthlvvgep.esrslkylealklnipivheewlldc 78 
                 ++t   ++ +r+ l + + e+G+++    +   ++ tth v  ++ +  s   + + ++ i++v++ew+ +c
  EPX74040.1 164 YVTIDDNMLDRNTLIQQLTELGASIhqrpQFNKDDLTTHMVLPKNsCFNSVLDTISSESTIKFVSPEWIAAC 235
                 5555778899999*9**********77665556788999999999633334457788999***********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (402 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       636  (0.0354733); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 3098.12
//
Query:       EPX74041.1  [L=313]
Description: FHA domain-containing protein Far10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      1e-18   67.4   0.1    3.1e-18   65.9   0.0    1.9  2  FHA           FHA domain
     0.0025   18.1   0.0      0.006   16.9   0.0    1.7  1  Yop-YscD_cpl  Inner membrane component of T3SS, cytoplasmic d
  ------ inclusion threshold ------
      0.013   15.5   0.0       0.71   10.0   0.0    2.7  2  DUF5429       Family of unknown function (DUF5429)


Domain annotation for each model (and alignments):
>> FHA  FHA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.9   0.0   5.1e-22   3.1e-18       1      69 []      27     106 ..      27     106 .. 0.97
   2 ?   -3.0   0.0       1.6   9.7e+03       4      19 ..     233     252 ..     233     254 .. 0.58

  Alignments for each domain:
  == domain 1  score: 65.9 bits;  conditional E-value: 5.1e-22
                 EEEESS.......TTSSEETTSTTSTTTEEEEEEETTCEEEEEEEESSSSSEEETTEEEST....TSEEEE-TTEEEEET CS
         FHA   1 vtiGRs.......sdcdivlddpsiSrkHalikfdkgsgkvyleDlgSknGtfvNgqrigk....gepveLksgdvielG 69 
                 +++GR+       +++++ + ++++Sr+Ha+i+ +k+s  vy++D++S+nGtfvNg+r+++    + p +L+sgdv+++G
  EPX74041.1  27 YKVGRHtnkstapAPSNLYFTSKVLSRQHAEIWLEKDSFIVYVRDVKSSNGTFVNGNRLSSenkaSAPCRLNSGDVLDFG 106
                 79*****999999999999******************************************999999************8 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.6
                 ESSTTSSEE....TTSTTST CS
         FHA   4 GRssdcdiv....lddpsiS 19 
                 GR++++d      l+++ iS
  EPX74041.1 233 GRNKSTDASsflsLPHKYIS 252
                 78855444333337788888 PP

>> Yop-YscD_cpl  Inner membrane component of T3SS, cytoplasmic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0     1e-06     0.006      33      82 ..      48     106 ..      16     110 .. 0.82

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 1e-06
                   -TTS-TT-EEEEEETTE..EEEEE-CESS--EETTEE-S.ECC......--TTSEEEET CS
  Yop-YscD_cpl  33 DkevsrkhlkLeveees..vrledlgsrngllvngerve.ele......lrpgdvlelG 82 
                    k +sr+h+++ +e++s  v ++d++s ng++vng+r + e +      l+ gdvl  G
    EPX74041.1  48 SKVLSRQHAEIWLEKDSfiVYVRDVKSSNGTFVNGNRLSsENKasapcrLNSGDVLDFG 106
                   5778*****99888887336789***************953335678888888888777 PP

>> DUF5429  Family of unknown function (DUF5429)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0     0.025   1.5e+02       8      24 ..     240     256 ..     235     262 .. 0.86
   2 ?   10.0   0.0   0.00012      0.71       6      27 ..     289     310 ..     286     313 .] 0.89

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.025
     DUF5429   8 kafflslqhaavsGvav 24 
                  + flsl h  +s va+
  EPX74041.1 240 ASSFLSLPHKYISDVAI 256
                 567************97 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00012
     DUF5429   6 hnkafflslqhaavsGvavcls 27 
                  n+affls    av+Gv v l 
  EPX74041.1 289 NNRAFFLSPFFIAVAGVIVYLG 310
                 59****************9885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (313 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       779  (0.0434492); expected 358.6 (0.02)
Passed bias filter:                      587  (0.0327403); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.22s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2345.66
//
Query:       EPX74042.1  [L=291]
Description: RAVE complex subunit Rav2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-22   79.7   4.0    5.5e-20   71.9   4.0    2.3  1  Rogdi_lz  Rogdi leucine zipper containing protein
  ------ inclusion threshold ------
      0.012   14.1   0.2      0.015   13.8   0.2    1.1  1  Sec39     Secretory pathway protein Sec39


Domain annotation for each model (and alignments):
>> Rogdi_lz  Rogdi leucine zipper containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.9   4.0   6.1e-24   5.5e-20       1     263 [.      13     274 ..      13     279 .. 0.75

  Alignments for each domain:
  == domain 1  score: 71.9 bits;  conditional E-value: 6.1e-24
    Rogdi_lz   1 EleWLlkeelketlpqlkegLeeClallapedpgstLvlSssrsesvKGvvtRvGtrivkgdislrlrtlpkltlklnptkpivleqLtdlrtlltqal 99 
                 E eW+ k+ l    +++++ ++e+l+l++ +  +  Lv Ss+++++vKG+v+R+G+ i +++++++  +  + ++kl++ k ++leq+ +l ++l+  l
  EPX74042.1  13 EKEWFEKNVLPGFWESVINEVKEALELVERDT-PTVLVFSSQKTDAVKGIVSRKGALIDRINLTIKVGRSTQ-MIKLEEPKTLKLEQILSLVNYLHYLL 109
                 78999999999999**************9888.899*******************************99888.9************************* PP

    Rogdi_lz 100 dlLdltlktgdelsksaqflssqLrllleslseAkalLkgppe......pelafpang............................wttesaashfePp 164
                  +L    k++++        ++qL+++l+ ++    lL+++ e      ++l++  n+                            +++++a++ f+Pp
  EPX74042.1 110 YVLLRIKKNSARA-------IQQLEEILRAIA---YLLNTEEEnngscaTNLVSQGNNislqapfsqslqsasggsdlsnsqsplyVYKKAASDLFTPP 198
                 **88333333333.......333333333332...2333333333333344444444466666666677777777777777777854455566****** PP

    Rogdi_lz 165 lppnlsldlyiqeaelvldlrvLepvtakpwseistsfgdkladalgtarrlehdeaeevfkkgeeVmvrekvrVesaDPsLislsakLgalehllaqa 263
                 lp+nl l +++++++++l l  L  +++         + d ++          ++e++++++        ++++  s+DP+L++++akL+al++ ++ +
  EPX74042.1 199 LPSNLGLSFSVSKSSVCLHLFRLLGTNP---------ILDSFKFG--------SNETNNTLH------PSQRIDAFSQDPILLAVTAKLSALQKRVNDI 274
                 *******************988874444.........33444422........233333333......3579*********************999876 PP

>> Sec39  Secretory pathway protein Sec39
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.2   1.6e-06     0.015     284     376 ..     102     196 ..      51     217 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1.6e-06
                 HHHHHHHHHHHH...HHHH.TSTTHHHHHHHHHHHHT..................................TS-SEEEETTEEEEHHHHHHHHHHH CS
       Sec39 284 eryaraalaivYlvsetseealegaheilsrlaelldldpppslssaasslp...pveldesslsstsrasllrndlleesnpLtapskeslslle 376
                  +y    l ++  ++++s  a++++ eil+ +a ll+ +++++ s a++ ++   +++l++   +s + a     dl +++ pL +++k++ +l++
  EPX74042.1 102 VNYLHYLLYVLLRIKKNSARAIQQLEEILRAIAYLLNTEEENNGSCATNLVSqgnNISLQAPFSQSLQSA-SGGSDLSNSQSPLYVYKKAASDLFT 196
                 4788899999999**************************9999987777766444677776444444444.4677899999*****9999988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (291 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       606  (0.0338); expected 358.6 (0.02)
Passed bias filter:                      451  (0.0251548); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2028.60
//
Query:       EPX74043.1  [L=249]
Description: actin binding methyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.6e-16   58.9   0.0    1.3e-15   58.0   0.0    1.5  1  Methyltransf_12  Methyltransferase domain
    1.2e-14   54.5   0.0    1.5e-14   54.1   0.0    1.2  1  Methyltransf_23  Methyltransferase domain
    1.9e-12   47.7   0.0    3.4e-12   46.9   0.0    1.4  1  Methyltransf_25  Methyltransferase domain
    3.5e-11   43.1   0.0    4.6e-11   42.7   0.0    1.2  1  Methyltransf_31  Methyltransferase domain
    3.4e-10   40.4   0.0    8.5e-10   39.2   0.0    1.6  2  Methyltransf_11  Methyltransferase domain
    1.7e-05   24.4   0.0    2.7e-05   23.8   0.0    1.3  1  MTS              Methyltransferase small domain
     0.0005   19.5   0.0    0.00068   19.0   0.0    1.1  1  Ubie_methyltran  ubiE/COQ5 methyltransferase family
      0.001   18.7   0.0     0.0016   18.1   0.0    1.2  1  NodS             Nodulation protein S (NodS)
  ------ inclusion threshold ------
      0.012   15.1   0.0        4.9    6.6   0.0    2.3  2  CheR             CheR methyltransferase, SAM binding domain


Domain annotation for each model (and alignments):
>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.0   0.0   6.4e-19   1.3e-15       1      99 []      60     161 ..      60     161 .. 0.92

  Alignments for each domain:
  == domain 1  score: 58.0 bits;  conditional E-value: 6.4e-19
  Methyltransf_12   1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvelealdlldldgg.ssfDlvvasnvlhhl..kdirevldnirk 91 
                      Le+GcG+G+l+ +lle  p+++++++D+sp+aie  k++ ++ + + + +v   ++d ld+  + s  D+v+a++vl++l  ++ +++++n+ +
       EPX74043.1  60 LEVGCGVGNLVYPLLEVQPNLRVLCCDFSPRAIEFVKKHENFDKSKVVPFVCDITEDRLDQWVPaSGIDTVTAIFVLSALprEKQQDAIRNLSS 153
                      8********************************99999999999988888888888877777668****************88888******** PP

  Methyltransf_12  92 lLkpgGrl 99 
                      +Lk  G+l
       EPX74043.1 154 VLKVKGHL 161
                      ***99986 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.1   0.0   7.6e-18   1.5e-14       8     164 ..      40     219 ..      15     220 .. 0.76

  Alignments for each domain:
  == domain 1  score: 54.1 bits;  conditional E-value: 7.6e-18
  Methyltransf_23   8 elsdklerllpk.lraggrvLdiGcGtGillevlrengf..svtgvDlspeaveiae......kakkaqkdqfdeq..............eaae 78 
                      +l+++ ++ ++  ++++  +L++GcG+G+l   l e +    v   D sp+a+e ++      k           +              + ++
       EPX74043.1  40 WLDREFDKYFGLpDKSPLTLLEVGCGVGNLVYPLLEVQPnlRVLCCDFSPRAIEFVKkhenfdK-----------SkvvpfvcditedrlDQWV 122
                      344445454433477888**********87666655544469************9866664431...........2233334445556668888 PP

  Methyltransf_23  79 pqgkfdlIvlrevlehvp..dppellrqiatllkpgGylllseplaslkedrllld.........wlylvpagrhisffsarslkelleeaGle 161
                      p+  +d++++++vl  +p      ++r++ + lk  G+l+++++   + + +++++          ++ +++g+ ++ff +++l+ ++e++Gl+
       EPX74043.1 123 PASGIDTVTAIFVLSALPreKQQDAIRNLSSVLKVKGHLVFRDYCDGDFAQKKFQQssdpslideRTFVRQDGTISYFFIEEELNYWMENSGLR 216
                      ******************65599*********************98888888898855444444345559999999****************** PP

  Methyltransf_23 162 vve 164
                      +++
       EPX74043.1 217 LIS 219
                      997 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.9   0.0   1.7e-15   3.4e-12       2      97 .]      60     159 ..      59     159 .. 0.91

  Alignments for each domain:
  == domain 1  score: 46.9 bits;  conditional E-value: 1.7e-15
                      EEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTTTEEEEESBCCG..BS..SSTTTEEEEEEESTGGGSSHHHHHHHHHHHHH CS
  Methyltransf_25   2 LdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeeglnvefvqgdaed..lp..fedgsfDlvvssgalhhlsdedlekalkeiar 91 
                      L++GcG G+l+  l++  ++ +v+++D+s++++e ++++ + ++ +v   ++d+++  l+   +++ +D v+++++l+ l++e++++a++++++
       EPX74043.1  60 LEVGCGVGNLVYPLLEVQPNLRVLCCDFSPRAIEFVKKHENFDKSKVVPFVCDITEdrLDqwVPASGIDTVTAIFVLSALPREKQQDAIRNLSS 153
                      9**************99779*****************99988888999999999653555446999**************************** PP

                      HEEEEE CS
  Methyltransf_25  92 vLkpgG 97 
                      vLk +G
       EPX74043.1 154 VLKVKG 159
                      ***887 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.7   0.0   2.3e-14   4.6e-11       2     126 ..      54     180 ..      53     214 .. 0.78

  Alignments for each domain:
  == domain 1  score: 42.7 bits;  conditional E-value: 2.3e-14
  Methyltransf_31   2 dkglrvlDlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaqklgldnveFeqgdiee..lekl.ledekfDlilsnevl..naladp 90 
                      ++ l++l++GCG G+l++ l  e+ p+ +v   D+s++aie+ +++    +++ v   ++di+e  l+ + +  + +D +++  vl       +
       EPX74043.1  54 KSPLTLLEVGCGVGNLVYPLL-EVQPNLRVLCCDFSPRAIEFVKKHENFDKSK-VVPFVCDITEdrLD-QwVPASGIDTVTAIFVLsaLPREKQ 144
                      67899****************.***********************86666666.55557888887555.65777*********99955555678 PP

  Methyltransf_31  91 dkileeiervlkpggilliedprllaelp.akveees 126
                      +++++++++vlk +g+l+ +d++   +++ +k++++s
       EPX74043.1 145 QDAIRNLSSVLKVKGHLVFRDYC-DGDFAqKKFQQSS 180
                      99******************999.4444444444444 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.2   0.0   4.3e-13   8.5e-10       1      96 []      60     163 ..      60     163 .. 0.87
   2 ?   -2.4   0.0       3.9   7.7e+03      15      41 ..     211     237 ..     205     246 .. 0.67

  Alignments for each domain:
  == domain 1  score: 39.2 bits;  conditional E-value: 4.3e-13
                      EEET-TTSHHHHHHHHTT..SEEEEEES-HHHHHHHHHHCCHHT-.EEEETTEECCC.TS..S-TT-EEEEEEES-CCC-..CCHHHHHHHHHH CS
  Methyltransf_11   1 LdvGcGtGrlaealakrg..arvvgvDlskemlklakekaseegl.kvefvvadaek.lp..fednsfDlvvssevlhhv..edpekalkeiaR 86 
                      L+vGcG G l+ +l +     rv+++D+s+++++ +k++ + ++   v fv+   e+ l   ++ + +D v++ +vl  +  e++++a++++  
       EPX74043.1  60 LEVGCGVGNLVYPLLEVQpnLRVLCCDFSPRAIEFVKKHENFDKSkVVPFVCDITEDrLDqwVPASGIDTVTAIFVLSALprEKQQDAIRNLSS 153
                      89*************66567****************999999988656665555554563469999**************999*********** PP

                      HEEEEEEEEE CS
  Methyltransf_11  87 vLkpgGllvi 96 
                      vLk  G+lv+
       EPX74043.1 154 VLKVKGHLVF 163
                      ********97 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 3.9
                      HHTTSEEEEEES-HHHHHHHHHHCCHH CS
  Methyltransf_11  15 akrgarvvgvDlskemlklakekasee 41 
                      ++ g r++ +D  ++ ++  k++ s +
       EPX74043.1 211 ENSGLRLISLDRVNRKVDNRKRNLSMD 237
                      355588888888888887777766655 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.0   1.3e-08   2.7e-05      34      93 ..      58     117 ..      50     130 .. 0.88

  Alignments for each domain:
  == domain 1  score: 23.8 bits;  conditional E-value: 1.3e-08
                 EEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTS CS
         MTS  34 kvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvleev 93 
                 ++l +GcG+G l   l++ +p+++v ++d + rA+e+ k+  +  k +v  + +d++e+ 
  EPX74043.1  58 TLLEVGCGVGNLVYPLLEVQPNLRVLCCDFSPRAIEFVKKHENFDKSKVVPFVCDITEDR 117
                 5799***********************************999999999888888888765 PP

>> Ubie_methyltran  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.0   3.4e-07   0.00068      45     151 ..      53     163 ..      25     177 .. 0.83

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 3.4e-07
                      S--TTEEEEES-TT-HHHHHHHHHHHHHHEEEEEES-HHHHHHHHHHHHHHTSSTEEEEE--TTT.-TT..S-T-EEEEEEES-GGG-S..-HH CS
  Ubie_methyltran  45 vkrgakvlDvagGtgDlafklsdsvgekgkvvvlDinenmLkvgekklkeegkinieflqanaee.Lpf..eddsfDvvtvsfGlrnvt..Dkl 133
                      +k++ ++l+v +G g+l + l++ v+ + +v  +D+++  ++  +k+ + +  + + f++  +e+ L+        D+vt  f l  ++   ++
       EPX74043.1  53 DKSPLTLLEVGCGVGNLVYPLLE-VQPNLRVLCCDFSPRAIEFVKKHENFDKSKVVPFVCDITEDrLDQwvPASGIDTVTAIFVLSALPreKQQ 145
                      68899***************996.8999****************999888888899***99877526642145889**********99832457 PP

                      HHHHHHHHHEEEEEEEEE CS
  Ubie_methyltran 134 kaLkeayrvlkpGGrlvv 151
                       a++++  vlk+ G+lv 
       EPX74043.1 146 DAIRNLSSVLKVKGHLVF 163
                      89************9975 PP

>> NodS  Nodulation protein S (NodS)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   7.8e-07    0.0016      46     145 ..      58     164 ..      48     173 .. 0.77

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 7.8e-07
        NodS  46 dalevGcaaGalterlapyckrltvv..dvveeaiararervk.esshiswivsdvq.....qfstdekfdlivvaevlyyiedvaelraavrnlvsll 136
                   levGc  G l   l  +  +l v+  d  ++ai+  ++  + ++s++   v+d++     q       d++    vl  +   ++ + a+rnl s+l
  EPX74043.1  58 TLLEVGCGVGNLVYPLLEVQPNLRVLccDFSPRAIEFVKKHENfDKSKVVPFVCDITedrldQWVPASGIDTVTAIFVLSALPR-EKQQDAIRNLSSVL 155
                 579***********999998888775449******9777655435699999999997221113344556788888888887764.56689********* PP

        NodS 137 apdgqlvfG 145
                 + +g+lvf 
  EPX74043.1 156 KVKGHLVFR 164
                 ********6 PP

>> CheR  CheR methyltransferase, SAM binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.0    0.0025       4.9       1      49 [.      30      73 ..      30     106 .. 0.81
   2 ?    6.3   0.0    0.0031       6.1     126     172 ..     116     162 ..     103     165 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0025
                SS--TTTTCHHHH.HHHHCCH.HHHHHHHTSSSEEEEEES-TTTHHHHHH CS
        CheR  1 neTeffreakhfe.elekevlepllakaknekrvriwsagcssGeEpYsl 49
                neT+ffr+ + ++ e+ k+           +++++++++gc+ G+  Y l
  EPX74043.1 30 NETRFFRDRHWLDrEFDKYFG------LPDKSPLTLLEVGCGVGNLVYPL 73
                89********99834666655......455689***********988866 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0031
                 -TTT-SGGG--EEEEEE-SSGGGC-CHHHHHHHHHHHCCEEEEEEEE CS
        CheR 126 nllekksvlgklDvifcrnvliYfdeetqekvlerfaeklkpgglLl 172
                 + l+++ + + +D +++  vl+ + +e+q++ ++++++ lk +g+L+
  EPX74043.1 116 DRLDQWVPASGIDTVTAIFVLSALPREKQQDAIRNLSSVLKVKGHLV 162
                 55678999999**********************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       570  (0.0317921); expected 358.6 (0.02)
Passed bias filter:                      470  (0.0262145); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 1865.36
//
Query:       EPX74044.1  [L=117]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       332  (0.0185175); expected 358.6 (0.02)
Passed bias filter:                      297  (0.0165653); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.23s 00:00:00.59 Elapsed: 00:00:00.38
# Mc/sec: 923.84
//
Query:       EPX74045.1  [L=253]
Description: elongator complex subunit Elp6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.2e-14   51.5   0.0    1.3e-13   51.0   0.0    1.2  1  ELP6        Elongation complex protein 6
      4e-06   26.5   0.0      5e-06   26.2   0.0    1.1  1  Elong_Iki1  Elongator subunit Iki1
  ------ inclusion threshold ------
       0.14   12.2   0.1       0.23   11.5   0.1    1.3  1  FliH        Flagellar assembly protein FliH


Domain annotation for each model (and alignments):
>> ELP6  Elongation complex protein 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.0   0.0   2.2e-17   1.3e-13      21     232 ..      19     212 ..       9     231 .. 0.85

  Alignments for each domain:
  == domain 1  score: 51.0 bits;  conditional E-value: 2.2e-17
        ELP6  21 illadsqaDgsFLiHHflsfylkagckvvfvalvqsfsHysivaqkLGvsLtqakekgqlvFleGLkesldvllqeepeseetealkfldesnaasLks 119
                 +l+  +++  +FLiH +l   ++ g kv+fv++++++  +    +k  ++ t  + k ++ +++G        ++++    + +      ++ +++ k+
  EPX74045.1  19 LLVGTRETPVTFLIHYYLNHCIREGLKVCFVSFSKTLDEHTDALRKWAIQGTDVRTKPNFYYVDGYSMLFAPAISTN----KIQ-----ANDVKNNPKQ 108
                 4566799**********************************************************998766666666....322.....2344555689 PP

        ELP6 120 lyefvksalkesedgeeewkppvllvDdlsvLlsl.gvsaaavldFihyCratvcsklkgnvvvlvradeeeedeeeelllkslkHqsslalkveGLat 217
                 ++  v ++l+++e    ++k ++l+++d++vLls  +++a+++ + +       ++k+ g  vv v+  +    +    ++ks+ H ++  +  + L++
  EPX74045.1 109 VFAPVIDCLQRNEF---DTKNSILIIEDIDVLLSTnSLQATQLQEAVFE-----LQKTSGRAVVNVSVGAPLPRQV--SFAKSIGHLATRCISCRPLTS 197
                 *********99985...88999************967888888876654.....566699***9999988887766..899****************** PP

        ELP6 218 GyckdvHGqlevlwr 232
                 G ++ + G ++v++ 
  EPX74045.1 198 GNARRITGFMRVTKG 212
                 ********9999875 PP

>> Elong_Iki1  Elongator subunit Iki1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   0.0   8.3e-10     5e-06      14     161 ..      16     198 ..      12     238 .. 0.85

  Alignments for each domain:
  == domain 1  score: 26.2 bits;  conditional E-value: 8.3e-10
  Elong_Iki1  14 pLtLvlDsleqsakplleelirrakssktkvifvsfe.tlkk................................pkgvdvfieaterskklkelakeik 79 
                 +LtL++ + e + + l++ +++++ ++  kv fvsf+ tl++                                p+  ++ i+a+++++++k++ + + 
  EPX74045.1  16 SLTLLVGTRETPVTFLIHYYLNHCIREGLKVCFVSFSkTLDEhtdalrkwaiqgtdvrtkpnfyyvdgysmlfaPAISTNKIQANDVKNNPKQVFAPVI 114
                 799999******************************8777779999999***************************************99********* PP

  Elong_Iki1  80 salspkssekkkkalviiDslnplas..likeeslaaflssllsspsvslvavYHtdv....eyapspltlLkylAttiltveslshe 161
                   l++++ + +k++++ii+++ +l+s  + ++++l + + +l +++   +v      v    + + s  +++ +lAt  +++ +l++ 
  EPX74045.1 115 DCLQRNEFD-TKNSILIIEDIDVLLStnSLQATQLQEAVFELQKTSGRAVVN---VSVgaplPRQVSFAKSIGHLATRCISCRPLTSG 198
                 *99666555.59**********998877667888888888888655444333...3444456899999************99988765 PP

>> FliH  Flagellar assembly protein FliH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   3.9e-05      0.23      38      98 ..      95     156 ..      89     160 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 3.9e-05
                 HHHHHHS--S-HHHHHHHHHHHHTTSCHHHS-EEEEE-HHHHHHHHHHHH.HHHHHCT-EEE CS
        FliH  38 rkvikkelsvdpekilalvrealaklpvdekkitlrvnpdDlelvrehlg.eelsargwrlv 98 
                  k+  + ++++p++++a v  +l+++ +d+k+  l++ + D+ l ++ l+  +l+++ ++l+
  EPX74045.1  95 NKIQANDVKNNPKQVFAPVIDCLQRNEFDTKNSILIIEDIDVLLSTNSLQaTQLQEAVFELQ 156
                 5666799****************************************999777887777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (253 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       537  (0.0299515); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 1937.23
//
Query:       EPX74046.1  [L=351]
Description: palmitoyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.8e-31  107.0   8.8    7.8e-31  107.0   8.8    2.1  2  DHHC      DHHC palmitoyltransferase
  ------ inclusion threshold ------
      0.081   12.5   6.1       0.66    9.6   0.8    2.1  2  TauE      Sulfite exporter TauE/SafE
      0.092   13.1   3.5       0.34   11.3   0.2    2.4  2  MgtE      Divalent cation transporter


Domain annotation for each model (and alignments):
>> DHHC  DHHC palmitoyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.3     0.093   5.6e+02     112     116 ..      99     103 ..      46     137 .. 0.58
   2 !  107.0   8.8   1.3e-34   7.8e-31       5     132 ..     182     310 ..     180     312 .. 0.88

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.093
        DHHC 112 llllf 116
                 +l+++
  EPX74046.1  99 VLFFI 103
                 22111 PP

  == domain 2  score: 107.0 bits;  conditional E-value: 1.3e-34
        DHHC   5 lkfCstcniykpprskHcrvCnrcvlrfDHhCpwlnnciGerNykyFllfllylllllilalvlllialvklveeekk.seflavtllkkllsilllvl 102
                 + +C tc+ y+ppr++Hc+ C++cv   DHhC wlnnciG+rNy+y+++fll+l++ +++ +vl +++    +++ +  +++  ++ + + +s++l ++
  EPX74046.1 182 TVYCHTCRLYRPPRASHCHLCDNCVEYLDHHCTWLNNCIGRRNYRYYFIFLLSLFFEALYLTVLGFYIAFASFRYGSDtNFARHLQRPWAGVSFFLGIY 280
                 579************************************************************9998877777665550555555666668999999** PP

        DHHC 103 sllfllllgllllfhlylilrnlTtieamk 132
                 ++l  ++ g+ll +++yli  +++ +e+++
  EPX74046.1 281 AALGSIFPGILLGYQCYLIGCGQNVHEFLR 310
                 ********************9999999876 PP

>> TauE  Sulfite exporter TauE/SafE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.5    0.0015       9.2      66     110 ..      92     135 ..      71     170 .. 0.64
   2 ?    9.6   0.8   0.00011      0.66      97     164 ..     239     307 ..     227     314 .. 0.61

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0015
        TauE  66 llllllgsliGallGallllllpsellkllfgvlllllallmllr 110
                   l+l+g l  ++ +++l +++++ ++ + f+ + +l++++ml  
  EPX74046.1  92 SALVLPGVLFFIFSAFWLWHHVSP-AIPITFSYIYALVIISMLKC 135
                 334445555555556666666665.44777777777777777654 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00011
        TauE  97 gvlllllallmllrkkr...srakgrerrptaillvligglvGllsGllGiGgGfllvpllllll..glplkk 164
                 +++l++l++++++ ++r    ++  +++ ++++ +++  +++G++++l +i  G+ll  +  +l   g+++++
  EPX74046.1 239 ALYLTVLGFYIAFASFRygsDTN-FARHLQRPW-AGV-SFFLGIYAALGSIFPGILL-GYQCYLIgcGQNVHE 307
                 45667777777776665442333.356666666.444.489**********988744.333333323666655 PP

>> MgtE  Divalent cation transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.2   5.7e-05      0.34      36      85 ..      83     133 ..      46     146 .. 0.75
   2 ?    2.1   0.4     0.039   2.3e+02      70     101 ..     230     259 ..     213     292 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 5.7e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHT-..CTSHHHHHHHHHHHHHHHHHH CS
        MgtE  36 llkelrvvlllgvilgllifllalllgw.slllalvvglalvlvllaaall 85 
                  +k +++ l  +v++g+l f++  ++ w  +  a+ ++++ + +l++ ++l
  EPX74046.1  83 QFKAFAMTLSALVLPGVLFFIFSAFWLWhHVSPAIPITFSYIYALVIISML 133
                 56788899999***********99998843333333555555555554444 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.039
                 HHHHHHHHHHHHHHHH..HHHHHHHHHHTTS- CS
        MgtE  70 vvglalvlvllaaallilgvllplllwklglD 101
                 ++ l+l++  l  ++l  g++++++++++g D
  EPX74046.1 230 IFLLSLFFEALYLTVL--GFYIAFASFRYGSD 259
                 3444455445555555..99999999998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (351 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       723  (0.0403257); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2660.02
//
Query:       EPX74047.1  [L=296]
Description: phosphoserine phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-20   74.5   0.0    1.9e-20   74.0   0.0    1.2  1  HAD              haloacid dehalogenase-like hydrolase
    2.9e-17   63.6   0.3    4.3e-17   63.1   0.3    1.3  1  Hydrolase        haloacid dehalogenase-like hydrolase
    3.1e-10   40.2   0.3      1e-06   28.7   0.2    3.1  3  Hydrolase_3      haloacid dehalogenase-like hydrolase
    1.2e-05   24.8   0.0    0.00016   21.2   0.0    2.1  2  Put_Phosphatase  Putative Phosphatase
     0.0011   19.0   0.3      0.023   14.8   0.3    2.6  1  HAD_2            Haloacid dehalogenase-like hydrolase
     0.0082   16.0   0.0       0.16   11.8   0.0    2.6  2  Acid_PPase       Acid Phosphatase
  ------ inclusion threshold ------
      0.021   14.3   0.0      0.032   13.7   0.0    1.2  1  DUF705           Protein of unknown function (DUF705)
      0.092   11.8   0.0       0.16   11.0   0.0    1.3  1  DUF1513          Protein of unknown function (DUF1513)


Domain annotation for each model (and alignments):
>> HAD  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.0   0.0   8.6e-24   1.9e-20       1     187 [.      80     249 ..      80     250 .. 0.81

  Alignments for each domain:
  == domain 1  score: 74.0 bits;  conditional E-value: 8.6e-24
         HAD   1 alfDfDgTLldgdslelllrfllrrgaprlwralreklllalfrellrldraglaelleallagls.eelaaelerfvaevirpklldpgalellaahr 98 
                 ++fD+D TL++++ +++++   + +++ +        + la++ e+  +   +  +   +ll+gls + +++ ++++         ++pga+el++  +
  EPX74047.1  80 VVFDMDSTLIQQECIDEIAAEAGIQKEVS------TITSLAMNGEIDFQ---ESLRRRVSLLEGLSvDVIDKIIAKIT--------FTPGAKELCRVLK 161
                 79**********77776666444444433......33333442222222...33444577999999555555555555........99*********** PP

         HAD  99 aaGdrvvvvSgglrplvepllaelgadevlatelevdd...rltgelglegkpvrgegkvaalrewlaaegegidleevvayGDspsDlpll 187
                 + G ++vv Sgg+ p++  + ++l+ d+ +a+ le+ +   +l+g+  ++g +v g+ k+  lre  ++++ g+++ e++a+GD+ +Dl ++
  EPX74047.1 162 KLGATLVVASGGFIPMANYVKEQLNLDYAYANMLEYSHdgkYLNGK--VQGAIVDGKRKAEILRE--KKAELGLEEFETMAVGDGANDLIMM 249
                 ************************************9999******..*****************..*********************9886 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.1   0.3   1.9e-20   4.3e-17       2     207 ..      78     250 ..      77     253 .. 0.83

  Alignments for each domain:
  == domain 1  score: 63.1 bits;  conditional E-value: 1.9e-20
                 SEEEEESBTTTBCHHHHHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHETTTEHHHHTHHHHHHHHHCHHHHHHHHHHHHHHCHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase   2 ktvvfDkdGTLttgepsvedvivsaalalaaaletgsehpigkalvaaakarsgaltgfatfigrgayaigkpewltaldippdlgaaigsaqsqgrtv 100
                 k+vvfD+d TL++ e     +i+++                     aa  +++ +++ ++       ++ g+ ++ ++l               + r +
  EPX74047.1  78 KLVVFDMDSTLIQQE-----CIDEI---------------------AAEAGIQKEVSTITS-----LAMNGEIDFQESL---------------RRRVS 130
                 89*************.....*****.....................***************.....*************...............33333 PP

                 HHHTTHHHHHHHHHHTHHBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTT.GGGESEEEEHHCES...STTT.........SHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxx...xxxx.........xxxxxxxxxxxx RF
   Hydrolase 101 allqaralavftiadplkvkpeaaeavasLkaagievvlltgdnpetaeraanqlG.ddyfdaviasdiet...vakp.........spegkvaaireL 186
                  l+   ++ + +i  +++  p+a+e+++ Lk+ g  +v+++g++  +a+ + +ql+ d ++++ ++++ ++    +k+         + e+++++  eL
  EPX74047.1 131 LLEGLSVDVIDKIIAKITFTPGAKELCRVLKKLGATLVVASGGFIPMANYVKEQLNlDYAYANMLEYSHDGkylNGKVqgaivdgkrKAEILREKKAEL 229
                 33333333333444555688************************************7666688888888888995555555555555************ PP

                 TSTGGGEEEEESSHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 187 qgkpeevamVGDgvnDaaala 207
                 + +  e+++VGDg+nD+ ++ 
  EPX74047.1 230 GLEEFETMAVGDGANDLIMMG 250
                 *****************9975 PP

>> Hydrolase_3  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0     0.097   2.2e+02       1      12 [.      80      91 ..      80     105 .. 0.89
   2 !    6.5   0.0    0.0027       6.1      17      58 ..     150     191 ..     145     213 .. 0.85
   3 !   28.7   0.2   4.7e-10     1e-06     186     245 ..     216     274 ..     212     284 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.097
                 EEEEIIIIIS-T CS
  Hydrolase_3  1 ialDlDGTLlns 12
                 +++D+D TL+++
   EPX74047.1 80 VVFDMDSTLIQQ 91
                 69*******986 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0027
                  -HHHHHHHHHHHHTTSEEEEE-SS-HHHHHHHHHHCCCCSEE CS
  Hydrolase_3  17 sektkeaikklkekgikvviATGRslravlpvleelgldlpv 58 
                  ++ +ke ++ lk+ g ++v+A+G  + ++ +v e+l+ld ++
   EPX74047.1 150 TPGAKELCRVLKKLGATLVVASGGFIPMANYVKEQLNLDYAY 191
                  56789999******************************9444 PP

  == domain 3  score: 28.7 bits;  conditional E-value: 4.7e-10
                  -SHHHHHHHHHHHCT--GGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEE-- CS
  Hydrolase_3 186 vsKgtalkklakelnisleeviafGDgeNDieMLeaaglgvAmgnaseevkkaAdyvtks 245
                    K++ l++   el+++  e++a+GDg ND+ M+  +glgvA  na+++v+ +A+  +++
   EPX74047.1 216 KRKAEILREKKAELGLEEFETMAVGDGANDLIMMGESGLGVAY-NAKPKVQLMASSKINQ 274
                  568999999999******************************5.9*****9999876655 PP

>> Put_Phosphatase  Putative Phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0     7e-08   0.00016       2      94 ..      79     169 ..      78     187 .. 0.85
   2 ?    1.3   0.0     0.081   1.8e+02     155     183 ..     222     247 ..     216     255 .. 0.67

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 7e-08
  Put_Phosphatase   2 lvvfDFDktiidedsdnwvvdelpatelfeelretlrkgl..wnelmdrvlkelheqgvseadikkvlrsiplspglvelikslakkkleldli 93 
                      lvvfD D t+i+++  + +  e++ +++ + + +   +g   ++e + r +  l+  g s + i k++ +i+++pg  el + l+k  l+  l+
       EPX74047.1  79 LVVFDMDSTLIQQECIDEIAAEAGIQKEVSTITSLAMNGEidFQESLRRRVSLLE--GLSVDVIDKIIAKITFTPGAKELCRVLKK--LGATLV 168
                      89****************************9998877653238888888888885..6788899******************9955..555555 PP

  Put_Phosphatase  94 i 94 
                      +
       EPX74047.1 169 V 169
                      5 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.081
  Put_Phosphatase 155 leelvaeqaregveyerliYvGDganDlC 183
                      l e +   a+ g e    + vGDganDl 
       EPX74047.1 222 LREKK---AELGLEEFETMAVGDGANDLI 247
                      44433...444555556778*******86 PP

>> HAD_2  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.3     1e-05     0.023       1     174 [.      80     255 ..      80     258 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1e-05
       HAD_2   1 iiFDlDgTlldteeliiqafnelleeyglselseeelrkliglslrellrklgeseeeeekieellrkyneekkkkevkpydgvkelLeeLkeagyklg 99 
                 ++FD+D Tl+ +     +++ e+++e g+ + + + + +l      +  + l  +    +++e l  ++ ++    ++++ +g+kel   Lk+ g +l 
  EPX74047.1  80 VVFDMDSTLIQQ-----ECIDEIAAEAGI-QKEVSTITSLAMNGEIDFQESLRRR---VSLLEGLSVDVIDKIIA-KITFTPGAKELCRVLKKLGATLV 168
                 789*****9975.....466667766666.3333333333333333333344443...34888888888888888.8********************** PP

       HAD_2 100 ivTsksreaveekleqlgiesyFdvivtsedvekk............KPdpeviekaleklklkkeeviyvGDsptDieaakkagik 174
                 +++ +   +++   eql+++  +  ++  ++ +k             K ++e++++   +l+l++ e++ vGD  +D++   + g+ 
  EPX74047.1 169 VASGGFIPMANYVKEQLNLDYAYANMLEYSHDGKYlngkvqgaivdgKRKAEILREKKAELGLEEFETMAVGDGANDLIMMGESGLG 255
                 *****99999999999999987777766665555444445556777788899999999999*****************998888865 PP

>> Acid_PPase  Acid Phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   0.0   7.3e-05      0.16       4      70 ..      78     173 ..      75     226 .. 0.75
   2 ?    0.7   0.0      0.19   4.2e+02      59      90 ..     261     291 ..     234     296 .] 0.74

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 7.3e-05
                 SEEEE-STTTSSSS-TTTS........................S-S-EEE-TTS................-EEETT--EE---TTHHHHHHHHHHTT-- CS
  Acid_PPase   4 klivFDLDyTLWpfevdtl........................vsaplkkeskks...............evvDrrgeelklypdveeileelkskevk 63 
                 kl+vFD+D TL + e+                                      +                v+D+   ++++ p ++e+ + lk+ + +
  EPX74047.1  78 KLVVFDMDSTLIQQECIDEiaaeagiqkevstitslamngeidF----------QeslrrrvslleglsvDVIDKIIAKITFTPGAKELCRVLKKLGAT 166
                 8***********99985444766666666666655555544332..........033334344557777788899999999999999999999999999 PP

                 EEEEE-- CS
  Acid_PPase  64 lavaSrt 70 
                 l+vaS  
  EPX74047.1 167 LVVASGG 173
                 9999865 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.19
                 HTT--EEEEE--S-HHHHHHHHHHTT-G.... CS
  Acid_PPase  59 skevklavaSrtdepdlarelLklleindake 90 
                 + +v+l+++S+ ++++l +++L ll in++++
  EPX74047.1 261 KPKVQLMASSKINQTSL-QNVLYLLGINKSEQ 291
                 47899999999999887.78999999994443 PP

>> DUF705  Protein of unknown function (DUF705)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   1.4e-05     0.032     125     154 ..      68      97 ..      53     110 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.4e-05
      DUF705 125 kelslylkikhvvvfDlDstLitdeeevel 154
                  + + y+  k +vvfD+DstLi +e   e+
  EPX74047.1  68 LKYEAYSTSKKLVVFDMDSTLIQQECIDEI 97 
                 56677889999***********98876665 PP

>> DUF1513  Protein of unknown function (DUF1513)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0     7e-05      0.16     106     152 ..     160     205 ..     152     211 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 7e-05
     DUF1513 106 lladgetLvvAnGGietepesgreklnldtmqpslvyLdaetGalle 152
                 l++ g+tLvvA GG    +++ +e+lnld   +++    +++G+ l+
  EPX74047.1 160 LKKLGATLVVASGGFIPMANYVKEQLNLDYAYANMLEY-SHDGKYLN 205
                 667799********99999999********99999988.88888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (296 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       536  (0.0298957); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2066.75
//
Query:       EPX74048.1  [L=452]
Description: F-box protein Pof9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      3e-14   53.4   5.2    4.4e-06   27.2   0.1    4.0  4  RCC1         Regulator of chromosome condensation (RCC1) repe
    2.2e-06   27.3  13.9    0.00068   19.4   0.9    5.1  5  RCC1_2       Regulator of chromosome condensation (RCC1) repe
    6.2e-06   26.0   0.9    1.4e-05   24.9   0.9    1.6  1  F-box-like   F-box-like
    0.00059   19.6   1.1     0.0013   18.5   1.1    1.6  1  F-box        F-box domain
  ------ inclusion threshold ------
        0.2   12.4   0.0       0.38   11.4   0.0    1.4  1  Ground-like  Ground-like domain
        0.2   11.5   1.4       0.58   10.1   1.4    1.8  1  F-box_4      F-box


Domain annotation for each model (and alignments):
>> RCC1  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.2   0.1   1.5e-09   4.4e-06       1      48 [.      76     126 ..      76     128 .. 0.83
   2 ?   -1.8   0.0       1.7   5.1e+03      36      50 .]     153     167 ..     141     167 .. 0.77
   3 ?    3.3   0.0     0.044   1.3e+02       8      49 ..     303     345 ..     302     346 .. 0.82
   4 !   22.6   0.3     4e-08   0.00012       1      49 [.     349     413 ..     349     414 .. 0.73

  Alignments for each domain:
  == domain 1  score: 27.2 bits;  conditional E-value: 1.5e-09
                 TTEEEEEE--GGGTTSS...SS---EEEEEE-GGGTTS-EEEEEEETTEEE CS
        RCC1   1 dGrVysWGrndyGqLGl...gttesvlvPtkveglsgnrvvkvacGddhtv 48 
                 +G Vy+WG  ++++LG+    t+  +++P  ++g+ + ++v++a G++  +
  EPX74048.1  76 KGYVYTWGEKSWNRLGRlvsHTHFPHHKPIALTGSYAVKAVQIAVGGYGIF 126
                 599**************55333355599********99********98655 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 1.7
                 -EEEEEEETTEEEEE CS
        RCC1  36 rvvkvacGddhtval 50 
                  v ++ +G d+++a+
  EPX74048.1 153 FVYSIHAGRDYCLAM 167
                 466799999999986 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.044
                 E--GGGTTSSSS-.--EEEEEE-GGGTTS-EEEEEEETTEEEE CS
        RCC1   8 GrndyGqLGlgtt.esvlvPtkveglsgnrvvkvacGddhtva 49 
                 G+++   +G+ +t e+  +P   e+l+++ ++  + Gd+h ++
  EPX74048.1 303 GNGNTVYMGNESTkETDAKPIVHEFLQNQSIKRLVHGDYHHLL 345
                 6777777888777555588*********************775 PP

  == domain 4  score: 22.6 bits;  conditional E-value: 4e-08
                 TTEEEEEE..--GGGTTSSSS-.....--E..EE.........EEE-GGGTTS-EEEEEEETTEEEE CS
        RCC1   1 dGrVysWG..rndyGqLGlgtt.....esv..lv.........PtkveglsgnrvvkvacGddhtva 49 
                 dG+V+sWG   ++ G+LGlgt      ++v  +v         P++v++      +++a+G+  +++
  EPX74048.1 349 DGSVWSWGmeLSNCGCLGLGTLynqigDNVliDVpgrrvtvlrPQRVSWNA--TCISIAAGGWQSAM 413
                 9*******999********88854443333552233333445599999976..9*******998876 PP

>> RCC1_2  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.1     0.056   1.7e+02      17      26 ..      76      88 ..      74      92 .. 0.73
   2 !    9.4   0.0    0.0003      0.91       2      29 ..     116     145 ..     115     146 .. 0.86
   3 ?    2.3   0.1     0.052   1.5e+02       3      21 ..     156     174 ..     154     188 .. 0.85
   4 !   19.4   0.9   2.3e-07   0.00068       7      30 .]     339     364 ..     333     364 .. 0.88
   5 ?   -2.0   0.1       1.2   3.5e+03       2       8 ..     402     408 ..     401     409 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.056
      RCC1_2 17 dGeVlcWG...sN 26
                 G V++WG   +N
  EPX74048.1 76 KGYVYTWGeksWN 88
                589*****55555 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.0003
      RCC1_2   2 ksvsaGdyHscaLtedGeVlcWGs..NsdG 29 
                 ++++ G+y  + L edG+++ +G   Ns+ 
  EPX74048.1 116 VQIAVGGYGIFLLNEDGKLHITGKrtNSFS 145
                 79*********************5457765 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.052
      RCC1_2   3 svsaGdyHscaLtedGeVl 21 
                 s+ aG++  +a++++G+++
  EPX74048.1 156 SIHAGRDYCLAMSDEGNLW 174
                 566999**********998 PP

  == domain 4  score: 19.4 bits;  conditional E-value: 2.3e-07
      RCC1_2   7 GdyHscaLtedGeVlcWG..sNsdGQ 30 
                 GdyH + L  dG V++WG    ++G+
  EPX74048.1 339 GDYHHLLLKQDGSVWSWGmeLSNCGC 364
                 9*****************44468997 PP

  == domain 5  score: -2.0 bits;  conditional E-value: 1.2
      RCC1_2   2 ksvsaGd 8  
                 +s++aG+
  EPX74048.1 402 ISIAAGG 408
                 89***97 PP

>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.9   4.7e-09   1.4e-05       7      47 ..      12      51 ..       8      52 .. 0.93

  Alignments for each domain:
  == domain 1  score: 24.9 bits;  conditional E-value: 4.7e-09
  F-box-like  7 EiLlqIFsyLppsdLlrlalVCrrWrrvaldtplLWrrlvl 47
                +iL++I syL+ +dLl l ++Cr+++ v  +   +W rl+ 
  EPX74048.1 12 DILIEIGSYLDSEDLLHLIQTCRQFHLVFENK-TVWLRLCK 51
                799*************************9877.*****996 PP

>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   1.1   4.4e-07    0.0013       2      47 ..       5      50 ..       4      51 .. 0.93

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 4.4e-07
                HHHHS-HHHHHHHHHTS-HHHHHHHCTT-HHHHHHHTTHHHHHHHH CS
       F-box  2 tlsrLPsevlrhILerLplsdllalrrVSkgwrilidsdrlwcksi 47
                +l+rL++++l +I ++L+  dll l ++++ ++ +  ++  w++ +
  EPX74048.1  5 PLLRLSLDILIEIGSYLDSEDLLHLIQTCRQFHLVFENKTVWLRLC 50
                79******************************99999988888766 PP

>> Ground-like  Ground-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00013      0.38      38      66 ..     141     169 ..     135     173 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00013
  Ground-like  38 gssfevicsegdfsytifagtayCkvekn 66 
                   +sf  ++se  f+y+i ag +yC + ++
   EPX74048.1 141 TNSFSQVVSELGFVYSIHAGRDYCLAMSD 169
                  569*********************98776 PP

>> F-box_4  F-box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   1.4   0.00019      0.58       4      38 ..       5      39 ..       3      92 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00019
     F-box_4  4 sLssLPlevlqhiaslLDsfsLsqLslvskllrev 38
                 L +L l++l +i s+LDs  L++L ++++++  v
  EPX74048.1  5 PLLRLSLDILIEIGSYLDSEDLLHLIQTCRQFHLV 39
                588999************************98766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (452 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       395  (0.0220313); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3187.14
//
Query:       EPX74049.1  [L=352]
Description: hypothetical protein SOCG_03264 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-11   44.6   3.2    4.2e-11   42.9   3.2    1.9  1  MBOAT_2   Membrane bound O-acyl transferase family


Domain annotation for each model (and alignments):
>> MBOAT_2  Membrane bound O-acyl transferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.9   3.2   2.4e-15   4.2e-11       2      79 ..     222     297 ..     221     302 .. 0.90

  Alignments for each domain:
  == domain 1  score: 42.9 bits;  conditional E-value: 2.4e-15
     MBOAT_2   2 pplfgslleayslrrfWgrfWHqlfrrglkstakkilrlllgsklarylqllvaFllSGllHaagdytqlap.estall 79 
                 ppl+++l+++ +++ fW++ WH  ++ +++++++ +++ l ++   ++l  l+ Fl+SGl H ++ + +l++ + +++l
  EPX74049.1 222 PPLMKNLFKTKTVNAFWSTDWHVWTKPIFRTLGWEPVHGLTQN---KFLGSLACFLISGLYHDFAFWSVLGHsSPGIVL 297
                 9****************************************99...9*********************99963222444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (352 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       536  (0.0298957); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2592.85
//
Query:       EPX74050.1  [L=220]
Description: ribosomal protein subunit S26 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.1e-24   84.4   0.2    8.1e-24   83.7   0.2    1.3  1  Sod_Fe_C  Iron/manganese superoxide dismutases, C-terminal do


Domain annotation for each model (and alignments):
>> Sod_Fe_C  Iron/manganese superoxide dismutases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.7   0.2   4.5e-28   8.1e-24       5     102 .]     102     211 ..      99     211 .. 0.92

  Alignments for each domain:
  == domain 1  score: 83.7 bits;  conditional E-value: 4.5e-28
                 HHHHHHHHHSSHHHHHHHHHHHHHHSSSSEEEEEEEETTTE.EEEEEEETTTBGGGGTTC..........EEEEEE-SGGGTHHHH.TT-HHHHHHHHG CS
    Sod_Fe_C   5 laeaieedfgslekfkkefkaaalavfgsGwawLvldkkkk.Leivttknqdnplvkeak..........plLalDvwehAYyldy.qnkradYieafw 91 
                 l+  i+++fgs++++++++ + + +vfg Gw wLv++++++ ++++ t n++n++ ++++          plL+l++w+++Y  dy  n++++Yi+++w
  EPX74050.1 102 LKPGIDASFGSFNELRSQLIEVGNSVFGDGWLWLVYSPERSlFSLLCTYNASNAFLWGTEfpktrtkeivPLLCLNLWQYSYLQDYgINNKEKYISNWW 200
                 77789********************************996526889999999999987778888899999****************779********** PP

                 GGBBHHHHHHH CS
    Sod_Fe_C  92 nvvnWkeveer 102
                 n++nW+ v++r
  EPX74050.1 201 NMINWSVVNNR 211
                 ********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       330  (0.0184059); expected 358.6 (0.02)
Passed bias filter:                      247  (0.0137766); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1583.55
//
Query:       EPX74051.1  [L=82]
Description: hypothetical protein SOCG_05098 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       606  (0.0338); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.24s 00:00:00.59 Elapsed: 00:00:00.38
# Mc/sec: 642.54
//
Query:       EPX74052.1  [L=609]
Description: ATP-dependent RNA helicase Spb4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.6e-43  147.4   0.1    6.9e-43  146.4   0.1    1.5  1  DEAD           DEAD/DEAH box helicase
    2.2e-23   82.7   0.0      9e-23   80.7   0.0    2.1  2  Helicase_C     Helicase conserved C-terminal domain
    6.1e-19   68.0   0.1    1.3e-18   67.0   0.1    1.6  1  DUF4217        Domain of unknown function (DUF4217)
    9.1e-08   32.3   0.0    9.1e-08   32.3   0.0    2.1  2  ResIII         Type III restriction enzyme, res subunit
    0.00041   19.6   0.0    0.00041   19.6   0.0    1.8  2  ERCC3_RAD25_C  ERCC3/RAD25/XPB C-terminal helicase
     0.0079   15.8   0.1      0.015   14.8   0.1    1.5  1  MICSWaP        Spore wall protein
  ------ inclusion threshold ------
       0.05   13.6   0.0       0.09   12.7   0.0    1.4  1  APG6           Apg6 BARA domain
        4.7    7.0  27.4        9.2    6.1  27.4    1.4  1  DUF1168        Protein of unknown function (DUF1168)


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  146.4   0.1   3.1e-46   6.9e-43       1     174 [.      25     200 ..      25     202 .. 0.88

  Alignments for each domain:
  == domain 1  score: 146.4 bits;  conditional E-value: 3.1e-46
                 -HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHS.TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTST........SEEEEEETTSSH..H CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........xxxxxxxxxxxx..x RF
        DEAD   1 tdiQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyet.kgktgpkalivePtreLaeqtlnnlkkfkkyid........lrvlliiggvaa..r 88 
                 t++Q ++ipl+l+++dv+v+a TGsGKTla+l+p++++++++  +++g  aliv+PtreLa+q+++ +++++ y          l   + igg+++  +
  EPX74052.1  25 TPVQTNTIPLFLKNKDVVVEAVTGSGKTLAYLLPAIDKILKRdSDEHGLGALIVAPTRELANQIFHVTEELLAYQPeelaqqksLVPDMYIGGKNTlsN 123
                 79*************************************99988999**************************83346666655444455888776535 PP

                 HHHHHHHTTCSEEEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  89 dqlskldngvdivvgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkdvk 174
                 d  s  ++++ iv+gtpgrl ++l  gk++ +++++l+lDEad+l d+gf++++++i++q+       ++qr++ ++SAT++++v+
  EPX74052.1 124 DMASFREKNPTIVIGTPGRLNEML--GKISSKNLQILILDEADTLIDMGFQKTLQSIISQI-------PKQRRTGLFSATMNDTVS 200
                 555555688*************99..6899*******************************.......78999*********8876 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       5.8   1.3e+04      84     102 ..     162     180 ..     160     195 .. 0.70
   2 !   80.7   0.0     4e-26     9e-23       2     111 .]     243     354 ..     242     354 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 5.8
                 TESEEEESSSSSSHHHHHH CS
  Helicase_C  84 kvnlVinfdlprnvtsyiq 102
                 +++++i+++++++++s+i 
  EPX74052.1 162 EADTLIDMGFQKTLQSIIS 180
                 6778888888877766654 PP

  == domain 2  score: 80.7 bits;  conditional E-value: 4e-26
                 HHHHHHHHHHHTTTTSEEEEEESSHHHHHHHHHHHHHT..TSTEEEESTTSTHHHHHHHHHHHHTTSSS.EEEESGGGTSSSTSTTESEEEESSSSSSH CS
  Helicase_C   2 kleallellkleeeggkilifvntidrlekvklllekk..gikvavlhgelpqnereeileqfnkgesd.vLiatdvaerGidipkvnlVinfdlprnv 97 
                 k++ +l++l +++e +k+++f  ++ ++e ++ ll++    +++++lhg+  q++r +  e+f +++++ vL++tdva+rG+dip+v+lV ++d+p ++
  EPX74052.1 243 KIQGMLNML-QNKEYDKAIVFFLSCASVEYFHSLLSQMklPYEIIALHGKQAQSNRSRNYEKFVNNNTKsVLLTTDVASRGLDIPNVDLVLQLDPPLDP 340
                 667788898.8999**************8744444444478**********************8777777***************************** PP

                 HHHHHHHTTSSSTT CS
  Helicase_C  98 tsyiqriGRtgRag 111
                 +s+ +r GR+gRag
  EPX74052.1 341 KSFSHRCGRAGRAG 354
                 ************97 PP

>> DUF4217  Domain of unknown function (DUF4217)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.0   0.1   5.8e-22   1.3e-18       3      61 .]     402     460 ..     400     460 .. 0.97

  Alignments for each domain:
  == domain 1  score: 67.0 bits;  conditional E-value: 5.8e-22
     DUF4217   3 qkleslcakdrdlkelAqkAfvsyvraYsvhlakeiFrvkkLdlealAksfGLleaPki 61 
                 + l++++  dr+++e++ ++fvs+vraY +h+a++iFr+k+Ldl +l ++++Ll +Pk+
  EPX74052.1 402 KYLRDIVRRDRNIYEKGLRGFVSHVRAYTKHQASFIFRIKDLDLHQLGTAYALLHLPKM 460
                 6799******************************************************9 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.3   0.0   4.1e-11   9.1e-08      23     170 ..      37     196 ..       5     197 .. 0.81
   2 ?   -3.3   3.0       3.4   7.6e+03      85     128 ..     515     562 ..     479     583 .. 0.55

  Alignments for each domain:
  == domain 1  score: 32.3 bits;  conditional E-value: 4.1e-11
                 TTSEEEEEESTTSTHHHHH.HHHHHHH-S........-EEEEESSHHHHHHHH...HHGGGGTGG.............GEEEESSS-B--.......-S CS
      ResIII  23 rdkrglikmaTGtGKTlva.aklierllkkgkee...kflflvprkslleqtl...eefkkflseayke.........igkkvsgdkkkakekdstnkk 105
                 ++k +++++ TG+GKTl + + +i+++lk  + e    +l+++p+++l +q     ee+  +++e+ ++         ig+k +  +++a + +++n  
  EPX74052.1  37 KNKDVVVEAVTGSGKTLAYlLPAIDKILKRDSDEhglGALIVAPTRELANQIFhvtEELLAYQPEELAQqkslvpdmyIGGKNTLSNDMA-SFREKNPT 134
                 78999**************8999999999988889999**************97877777777777665556665555444444444444.66899999 PP

                 EEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS....TTTHHHHHT---SEEEE.EESS-S CS
      ResIII 106 ilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgak...kswreilekfkeavllg.lTATpe 170
                 i++ t  +l++ +        + ++++ +++i DEa  l ++   k+ ++i+ +++++ + g ++AT++
  EPX74052.1 135 IVIGTPGRLNEML-------GKISSKNLQILILDEADTLIDMgfqKTLQSIISQIPKQRRTGlFSATMN 196
                 *********9999.......778888888************9887899999999999888875699976 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 3.4
                 GEEEESSS-B--...........-SEEEEEHHHHHHTH........HH CS
      ResIII  85 igkkvsgdkkka....kekdstnkkilvttiqsldadseeeeeeseel 128
                 + + +s++k+++     ++++ +++  + ++q+  +++ee++  +++ 
  EPX74052.1 515 KAEAWSKQKDMKekrvVRREKRKSRREFDKTQKRRKAEEENQASQQHS 562
                 344455555555555545555555556666666666664443333333 PP

>> ERCC3_RAD25_C  ERCC3/RAD25/XPB C-terminal helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   1.8e-07   0.00041      47     133 ..     243     336 ..     225     361 .. 0.76
   2 ?   -5.1   4.0       6.7   1.5e+04     199     231 ..     523     555 ..     494     573 .. 0.52

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 1.8e-07
  ERCC3_RAD25_C  47 racefLikyhekrgDkiivf...sDnvfaLkeyakklkkpy....iyGetseaerlkilqkfkknpkvntiflskvgDtsiDlPeanvliqiss 133
                    ++   L  +++k  Dk ivf   + +v   +++ +++k py    ++G+ ++++r++  +kf +n++ ++++   v+   +D+P+   ++q++ 
     EPX74052.1 243 KIQGMLNMLQNKEYDKAIVFflsCASVEYFHSLLSQMKLPYeiiaLHGKQAQSNRSRNYEKFVNNNTKSVLLTTDVASRGLDIPNVDLVLQLDP 336
                    55555666778889*****9555556666666666777776655579********************************************974 PP

  == domain 2  score: -5.1 bits;  conditional E-value: 6.7
  ERCC3_RAD25_C 199 eeleeeeelaystkeeqkellqkvlaakdeeae 231
                    ++++e++ +  +++++++e+ ++ +++k ee++
     EPX74052.1 523 KDMKEKRVVRREKRKSRREFDKTQKRRKAEEEN 555
                    333333333333333333333322222222222 PP

>> MICSWaP  Spore wall protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.1   6.9e-06     0.015      60     119 ..     226     285 ..     193     318 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 6.9e-06
     MICSWaP  60 eipneieldkCg.ksvselaslLnnvnnadsatsiIllltCeselyeevfisrglevpyvt 119
                   p+ + ++ C    + +++ +Ln ++n++ +  i+++l+C s  y      ++++ py +
  EPX74052.1 226 RAPSSLSIQSCVlPPMYKIQGMLNMLQNKEYDKAIVFFLSCASVEYFHSL-LSQMKLPYEI 285
                 45677788888635799****************************98654.4567777744 PP

>> APG6  Apg6 BARA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0     4e-05      0.09      91     138 ..     243     286 ..     203     318 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 4e-05
        APG6  91 ssgelklgllfserkfDkamvafleclkqlaekvekedkelelPYkik 138
                 + + + l  +++++++Dka+v fl+c +   e++++  ++++lPY+i 
  EPX74052.1 243 KIQGM-L-NMLQNKEYDKAIVFFLSCAS--VEYFHSLLSQMKLPYEII 286
                 44333.2.36689*************76..57777778899******2 PP

>> DUF1168  Protein of unknown function (DUF1168)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1  27.4    0.0041       9.2      47     126 ..     490     571 ..     488     583 .. 0.55

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0041
     DUF1168  47 rEyeRlklieekskkeeedeefqqkleenkeeaeektaKkrakRekkkqkakkkkkakkkkkkeke..keeksedseeksee 126
                 rE++R++ +ee+ ++ e+ +  ++ ++e+  ++++  +K+  +Rek+k++++  k +k++k++e++  ++++s++++++ ++
  EPX74052.1 490 REQARQRKMEEQGNQPEKPKIEKKPKAEAWSKQKDMKEKRVVRREKRKSRREFDKTQKRRKAEEENqaSQQHSSSNRKEGSQ 571
                 9***********9998887777776777666666666666666666664443333333333333330033333333222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (609 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2009  (0.112053); expected 358.6 (0.02)
Passed bias filter:                      702  (0.0391544); expected 358.6 (0.02)
Passed Vit filter:                       139  (0.0077528); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.74u 0.35s 00:00:01.08 Elapsed: 00:00:00.44
# Mc/sec: 4180.36
//
Query:       EPX74053.1  [L=77]
Description: ubiquitin-like protein modifier Ned8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.8e-26   91.0   0.1    3.1e-26   90.9   0.1    1.0  1  ubiquitin    Ubiquitin family
    6.4e-14   51.5   0.1      7e-14   51.4   0.1    1.0  1  Rad60-SLD    Ubiquitin-2 like Rad60 SUMO-like
    4.7e-05   23.8   0.1    0.00011   22.6   0.1    1.6  1  Ubiquitin_2  Ubiquitin-like domain
    0.00023   21.0   0.0    0.00027   20.8   0.0    1.1  1  TBK1_ULD     TANK binding kinase 1 ubiquitin-like domain


Domain annotation for each model (and alignments):
>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.9   0.1     7e-30   3.1e-26       1      72 []       3      74 ..       3      74 .. 0.98

  Alignments for each domain:
  == domain 1  score: 90.9 bits;  conditional E-value: 7e-30
                EEEEETTSEEEEEEEETTSBHHHHHHHHHHHHTSSGGGEEEEETTEEE-TTSBHGGHTTSTTEEEEEEESSC CS
   ubiquitin  1 itvktldgkkitleveesdtveelKekiaekegipaeqqrLiysGkvLedertleeygiqdgstlhlvlrlr 72
                i+vktl+gk+i+l+++++d+v+ +Ke+++ekegip++qqrLiy+Gk++ d++  e+y+++ gs+lhlvl lr
  EPX74053.1  3 IKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKYAESYHLEGGSVLHLVLALR 74
                89******************************************************************9876 PP

>> Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.4   0.1   1.6e-17     7e-14       1      72 []       1      71 [.       1      71 [. 0.97

  Alignments for each domain:
  == domain 1  score: 51.4 bits;  conditional E-value: 1.6e-17
                EEEEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEEETTEE--TTSBGGGSS--TTEEEEEEX CS
   Rad60-SLD  1 ikiilkgkdgkevkikVkptttvskLieayrkkkgipeeqkvrLiFDGeeLdpnstvedldiedgdtidvvi 72
                + i++k+ +gke+++ ++p+ +vs ++e+ ++k+gip+ +++rLi+ G+++ +++  e++ +e g+++++v+
  EPX74053.1  1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPP-SQQRLIYAGKQMADDKYAESYHLEGGSVLHLVL 71
                569***********************************.******************************986 PP

>> Ubiquitin_2  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.1   2.5e-08   0.00011      14      79 ..      11      68 ..       2      70 .. 0.75

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 2.5e-08
                 SEEEEEEETTSBHHHHHHHHHHHH---TTCEEEEEE.-SSSSEEECSSGCCSBCCCCT--TTEEEE CS
  Ubiquitin_2 14 vsserrfsksltieelKekLelitGtspasmrLqlyddkkdnevsklddddalLgsYgvkdgmrih 79
                 +  e  ++++++++ +Ke++e   G++p+++rL +          k + dd+  +sY+++ g+ +h
   EPX74053.1 11 KEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYA--------GKQMADDKYAESYHLEGGSVLH 68
                 5678899**************************997........3334455555566665555555 PP

>> TBK1_ULD  TANK binding kinase 1 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.0     6e-08   0.00027      19      55 ..      17      53 ..       5      62 .. 0.88

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 6e-08
    TBK1_ULD 19 ihpyntvaifqeevakqTkiaaekQellfeghrllle 55
                i+p+++v+ + e v ++  i++++Q l++ g++++ +
  EPX74053.1 17 IDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADD 53
                89******************************98655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       475  (0.0264934); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.35u 0.25s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 599.87
//
Query:       EPX74054.1  [L=219]
Description: hypothetical protein SOCG_03268 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.19   11.1   0.0       0.32   10.3   0.0    1.4  1  CASP_C    CASP C terminal
       0.26   11.7   0.0       0.26   11.7   0.0    1.7  2  DUF5383   Family of unknown function (DUF5383)


Domain annotation for each model (and alignments):
>> CASP_C  CASP C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   3.6e-05      0.32     222     246 ..      67      91 ..      52      95 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 3.6e-05
      CASP_C 222 anrtsRnlflvYalaLHllvfltly 246
                  +++s +++++Y ++LHll+  +ly
  EPX74054.1  67 DSKYSKWIIIIYLFFLHLLLAHMLY 91 
                 689*****************99998 PP

>> DUF5383  Family of unknown function (DUF5383)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   2.9e-05      0.26      48     114 ..      22      90 ..      14      92 .. 0.80
   2 ?   -5.3   2.6         2   1.8e+04     101     114 ..     141     154 ..     139     155 .. 0.63

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 2.9e-05
     DUF5383  48 eelkesLfassekesntiaakakelgLfseekesvkqsateqes..eeksnlLpillillivllivvll 114
                 ++ ++sL  +++ +s + ++k   l++   +++ + q++t+++   ++ s ++ i+++ ++ ll++ +l
  EPX74054.1  22 KSDARSLDGTGTPPSYSATNKFIDLEMADGSAQHSAQESTNNTGsdSKYSKWIIIIYLFFLHLLLAHML 90 
                 455667777788788888888888999998888888888887766677899**************9998 PP

  == domain 2  score: -5.3 bits;  conditional E-value: 2
     DUF5383 101 llillivllivvll 114
                  +++++ ++++v++
  EPX74054.1 141 YFVCIVNVALFVIF 154
                 45666667777777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       638  (0.0355848); expected 358.6 (0.02)
Passed bias filter:                      347  (0.0193541); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.44
# Mc/sec: 1501.50
//
Query:       EPX74055.1  [L=737]
Description: WD repeat/BOP1NT protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.5e-81  273.4  12.3    1.1e-79  268.0  12.3    2.3  1  BOP1NT       BOP1NT (NUC169) domain
    1.2e-22   79.8  12.9    2.6e-08   34.4   0.5    6.6  6  WD40         WD domain, G-beta repeat
    2.8e-06   27.5   0.1       0.56   10.5   0.1    4.9  6  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
  ------ inclusion threshold ------
       0.13   10.5   0.0       0.19   10.0   0.0    1.3  1  Frtz         WD repeat-containing and planar cell polarity ef


Domain annotation for each model (and alignments):
>> BOP1NT  BOP1NT (NUC169) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  268.0  12.3   2.5e-83   1.1e-79       2     260 .]     130     373 ..     129     373 .. 0.92

  Alignments for each domain:
  == domain 1  score: 268.0 bits;  conditional E-value: 2.5e-83
      BOP1NT   2 ddydhiGYdidgkkimkeakkdeldkllekiddpkawrtvkDkktgkevkLsdeelelikrlqkgelpdeeydpyedvvelftseeeihplseapepkr 100
                 dd  +i Ydidgkki+++a+  +ld+l+++id+ k w+ ++D++tg+ v+L++eel l+krl+++++pde++dpy+d+ ++ft++++ +p+s+apepkr
  EPX74055.1 130 DDNLYINYDIDGKKITRPATPAALDSLISSIDKDKGWTGIVDPMTGQPVNLTTEELGLLKRLAQSQVPDESFDPYPDYDDFFTKNVQLTPVSSAPEPKR 228
                 57789********************************************************************************************** PP

      BOP1NT 101 rfipskweakkvaklvrairkgrikl......ekkekeee......ekvydlWedeeeeeeekrkkeehipapklklPgheeSYnPpeeyllteeekke 187
                 rf psk+e+k++ +l+ airkg+i +      +      e       +  dlW+d+e+++   +k+ ++ papkl++P+heeSYnPpeeyl ++     
  EPX74055.1 229 RFAPSKHEEKRILQLAYAIRKGHIMTptqrteQ------EkehrseFADRDLWADDEQATV--NKQLDYAPAPKLPPPSHEESYNPPEEYLKKD----- 314
                 *************************96654322......233444467789****998755..5677789*********************654..... PP

      BOP1NT 188 weeadpedrkknfipqkfeslrkvpaYekfvkerFeRcLDLyLcpRvrkkrlnidpesLlPkLPspkdLkPFP 260
                                +++ slr vpaY++++kerFeRcLDLyL+pRvr+++lnidpesLlPkLPsp++L+PFP
  EPX74055.1 315 --------------SKRYPSLRLVPAYSNLIKERFERCLDLYLAPRVRRSKLNIDPESLLPKLPSPSELRPFP 373
                 ..............35799*****************************************************9 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.4   0.5   5.9e-12   2.6e-08       2      37 ..     375     411 ..     374     412 .. 0.92
   2 !    5.3   0.1    0.0091        41      12      29 ..     527     544 ..     516     550 .. 0.83
   3 !    9.6   0.0   0.00039       1.8      11      38 .]     571     597 ..     557     597 .. 0.85
   4 !    9.8   0.2   0.00034       1.5      11      35 ..     612     636 ..     601     639 .. 0.79
   5 !   11.5   0.0    0.0001      0.45       3      37 ..     646     681 ..     644     682 .. 0.85
   6 !   12.5   0.1   4.8e-05      0.21       3      37 ..     697     736 ..     695     737 .] 0.80

  Alignments for each domain:
  == domain 1  score: 34.4 bits;  conditional E-value: 5.9e-12
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 +c+ ++ GH + v+s++ ++dg wlasG+dDg +r+W
  EPX74055.1 375 RCTNVYIGHkGRVRSISAHKDGIWLASGGDDGILRVW 411
                 69999****555************************* PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.0091
                 SEEEEEEETTSSEEEEEE CS
        WD40  12 svtslafspdgawlasGs 29 
                 s+ sl++++ g+++a++s
  EPX74055.1 527 SIKSLSWHRRGDYIATCS 544
                 399************998 PP

  == domain 3  score: 9.6 bits;  conditional E-value: 0.00039
                 SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  11 ssvtslafspdgawlasGsdDgtvriWd 38 
                 +sv ++af+p +++l+ ++  + vri++
  EPX74055.1 571 GSVQAIAFHPTQPYLLVAT-QRYVRIYN 597
                 459*************999.******97 PP

  == domain 4  score: 9.8 bits;  conditional E-value: 0.00034
                 SSEEEEEEETTSSEEEEEETTSEEE CS
        WD40  11 ssvtslafspdgawlasGsdDgtvr 35 
                 ++++s++++p+g+ ++ Gs+D+ + 
  EPX74055.1 612 KWISSISVHPSGDHVIIGSYDKRLC 636
                 6899*****************9886 PP

  == domain 5  score: 11.5 bits;  conditional E-value: 0.0001
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 + +tl+ H   v++++++p  ++++s+sdDg v ++
  EPX74055.1 646 PYKTLRYHtRAVRDVSYHPTLPLFSSASDDGDVQVF 681
                 56788889555********************99875 PP

  == domain 6  score: 12.5 bits;  conditional E-value: 4.8e-05
                 EEEEEESS..SS...EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   3 clrtltGH..ss...vtslafspdgawlasGsdDgtvriW 37 
                 +l++l+ H   +   v s +++p  awl++++  g +r+W
  EPX74055.1 697 PLKILRNHkvVDnvgVLSSSWHPREAWLFTSGASGEIRMW 736
                 78899999662255566667********98888******* PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.1   0.00013      0.56      37      80 ..     383     426 ..     375     456 .. 0.86
   2 ?   -2.2   0.0       1.2   5.3e+03      36      58 ..     444     468 ..     438     471 .. 0.69
   3 ?    2.4   0.0     0.043   1.9e+02      35      55 ..     522     542 ..     502     560 .. 0.76
   4 !    5.0   0.0    0.0066        30      35      79 ..     567     610 ..     547     620 .. 0.84
   5 ?    0.4   0.0      0.18   8.2e+02      39      66 ..     655     682 ..     649     693 .. 0.74
   6 ?    2.5   0.0     0.039   1.8e+02       2      64 ..     661     735 ..     660     737 .] 0.69

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00013
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvks 80 
                  ++++vrs++ ++dg  La + +dg +r+ ++ +g++v ++  +s
   EPX74055.1 383 HKGRVRSISAHKDGIWLASGGDDGILRVWEILTGRCVWKCALDS 426
                  6899********************************99887665 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1.2
  ANAPC4_WD40  36 kedsevrsLaWkpdgk..lLavays 58 
                  ++   ++sLaW p  +  +Lav+++
   EPX74055.1 444 NKPCIIQSLAWGPLSEvpVLAVGVD 468
                  5566789999999776225777765 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.043
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLav 55 
                   +++ +++sL+W+  g  +a 
   EPX74055.1 522 VSTSYSIKSLSWHRRGDYIAT 542
                  466778999999999999885 PP

  == domain 4  score: 5.0 bits;  conditional E-value: 0.0066
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvk 79 
                  +k+ ++v+++a++p    L va++   vr+++  ++++v++l ++
   EPX74055.1 567 SKSRGSVQAIAFHPTQPYLLVATQ-RYVRIYNLVKQELVKTLLAG 610
                  567889***************987.59***********9998665 PP

  == domain 5  score: 0.4 bits;  conditional E-value: 0.18
  ANAPC4_WD40  39 sevrsLaWkpdgklLavaysdgevrlld 66 
                  + vr+++++p   l+  a +dg v++++
   EPX74055.1 655 RAVRDVSYHPTLPLFSSASDDGDVQVFH 682
                  5677777777777777777777777665 PP

  == domain 6  score: 2.5 bits;  conditional E-value: 0.039
  ANAPC4_WD40   2 swcptmDLiAlatedgellvfRlng......qrvwtl..........eedkedsevrsLaWkpdgklLavaysdgevrl 64 
                  s+ pt  L++ a++dg+++vf                          ++  ++  v s +W+p +  L  + + ge+r+
   EPX74055.1 661 SYHPTLPLFSSASDDGDVQVFHGRVyndllaS----PlivplkilrnHKVVDNVGVLSSSWHPREAWLFTSGASGEIRM 735
                  78888888888888888888854333233440....1444444444366677788888999999999999999999986 PP

>> Frtz  WD repeat-containing and planar cell polarity effector protein Fritz
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   4.2e-05      0.19     261     327 ..     613     682 ..     587     727 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 4.2e-05
        Frtz 261 qvislafnpdedkLllGceDssviLydeerkitklvkaev...vPsliswhpdsaillvasergelqifD 327
                  + s ++ p+ d +++G+ D+ ++ +d ++    +            +s+hp   ++  as+ g++q+f 
  EPX74055.1 613 WISSISVHPSGDHVIIGSYDKRLCWFDLDLSSKPYKTLRYhtrAVRDVSYHPTLPLFSSASDDGDVQVFH 682
                 35678899*******************9987665553333001345799*******************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (737 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       808  (0.0450667); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.72u 0.29s 00:00:01.01 Elapsed: 00:00:00.44
# Mc/sec: 5042.87
//
Query:       EPX74056.1  [L=427]
Description: paxillin-like protein Pxl1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.1e-25   87.8  36.3    8.3e-11   42.0   7.3    3.2  3  LIM          LIM domain


Domain annotation for each model (and alignments):
>> LIM  LIM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.0   7.3   4.6e-15   8.3e-11       1      58 []     247     303 ..     247     303 .. 0.95
   2 !   24.8  10.8     1e-09   1.9e-05       1      56 [.     307     361 ..     307     363 .. 0.95
   3 !   33.2   2.5   2.5e-12   4.5e-08       1      53 [.     367     417 ..     367     421 .. 0.93

  Alignments for each domain:
  == domain 1  score: 42.0 bits;  conditional E-value: 4.6e-15
                 -TTT--BE-TTTEEEEETTEEEETTTSB-TTT-SB-CTT.CEEETTEEEEHHHHHHHC CS
         LIM   1 CagCnkkiadrelvlkaldkvwHeeCFtCsdCqkeLkegsfyekdgklyCkkdylkkf 58 
                 C++C+ + ++  ++  a +k+ H++CF C++C ++L++ +f+ +d+++yC+ dy+++f
  EPX74056.1 247 CYACGLSLRAGRII-TAANKKMHPNCFHCATCFQNLEHVGFFFRDDNFYCHLDYHEQF 303
                 9********88888.6**************************************9875 PP

  == domain 2  score: 24.8 bits;  conditional E-value: 1e-09
                 -TTT--BE-TTTEEEEETTEEEETTTSB-TTT-SB-CTT..CEEETTEEEEHHHHHH CS
         LIM   1 CagCnkkiadrelvlkaldkvwHeeCFtCsdCqkeLkegs.fyekdgklyCkkdylk 56 
                 C+ C  +i+dr +   + ++ +He++  C+ C+++++e+s ++ +d+   C+++y +
  EPX74056.1 307 CKYCTTPIEDRAIH--IGNDWFHENHHFCAGCSENFRENSpCIFRDDLYWCQNCYDN 361
                 9********99998..89*************************************66 PP

  == domain 3  score: 33.2 bits;  conditional E-value: 2.5e-12
                 -TTT--BE-TTTEEEEETTEEEETTTSB-TTT-SB-CTT.CEEETTEEEEHHH CS
         LIM   1 CagCnkkiadrelvlkaldkvwHeeCFtCsdCqkeLkegsfyekdgklyCkkd 53 
                 C++C k+i    + ++  d  +H +C +C +C++ L +++++++++++ C+++
  EPX74056.1 367 CNKCRKPIL--GVSVNGIDGEYHHDCWNCGVCNRLLGDDGYFVIEDTPICRSC 417
                 *********..444469**********************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (427 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       935  (0.0521501); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3010.75
//
Query:       EPX74057.1  [L=564]
Description: guanyl-nucleotide exchange factor Vps901 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.5e-28   97.9   0.1    7.1e-28   96.9   0.1    1.6  1  VPS9      Vacuolar sorting protein 9 (VPS9) domain
    3.7e-15   56.0   1.9    8.3e-14   51.7   0.1    3.0  2  DUF5601   Domain of unknown function (DUF5601)
    4.3e-07   29.5   0.1    8.5e-07   28.6   0.1    1.5  1  CUE       CUE domain
  ------ inclusion threshold ------
        1.3   10.2   5.4          1   10.6   0.2    3.3  3  Basic     Myogenic Basic domain


Domain annotation for each model (and alignments):
>> VPS9  Vacuolar sorting protein 9 (VPS9) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.9   0.1   1.6e-31   7.1e-28       4     103 ..     252     349 ..     249     350 .. 0.97

  Alignments for each domain:
  == domain 1  score: 96.9 bits;  conditional E-value: 1.6e-31
        VPS9   4 aseeLkklseaksPreKlkcllrtieeiteavskseegeslgaDdlLPiliyviikssppnlysnvqfikrFrsktllegeegYylttleaavefiesl 102
                 a +eL++++ ++ Pr+K+ cl+++++ i++ +   +  ++++aD + P+li+v++k+ p++l+sn+q+i+rFrs+++l+ge  Yyl+tl  a++fi+ l
  EPX74057.1 252 AADELRRINDYHAPRDKIICLMNCCKVIYSYL--RNVVKEESADAFVPVLIFVLLKAHPKHLVSNIQYIQRFRSPEKLSGEVLYYLSTLMGAMSFIQAL 348
                 789*****************************..99999*********************************************************987 PP

        VPS9 103 e 103
                 +
  EPX74057.1 349 D 349
                 6 PP

>> DUF5601  Domain of unknown function (DUF5601)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.7   0.1   1.8e-17   8.3e-14       1      65 []     129     193 ..     129     193 .. 0.99
   2 ?    2.6   0.2     0.039   1.7e+02       4      58 ..     309     366 ..     307     372 .. 0.79

  Alignments for each domain:
  == domain 1  score: 51.7 bits;  conditional E-value: 1.8e-17
     DUF5601   1 KqiksfvrkisqrsisieelSemVqdFyqnlaerlnktplyktvsseavedlldeiEkyimtrlY 65 
                 K++ksf++++ +r +s+  +++++qdF+ ++ e++++++++ + s+ +++++ +++Ek++ +rlY
  EPX74057.1 129 KYLKSFLSEFMKRRWSVSYQVKLIQDFLAFIGEKIEQYEPWVSGSQAEIDNAKEGMEKLVSNRLY 193
                 99**************************************************************9 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.039
     DUF5601   4 ksfvrkis..qrsisieelSemVqdFyqnlaerlnktplyktvsse.avedlldeiEk 58 
                 k+ v++i+  qr+ s+e+lS  V  ++ +l   ++  +   t s   + e++ deiEk
  EPX74057.1 309 KHLVSNIQyiQRFRSPEKLSGEVLYYLSTLMGAMSFIQALDTNSLTiSEEEFNDEIEK 366
                 799999988899*********9999999999999888777776544355566666666 PP

>> CUE  CUE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.6   0.1   1.9e-10   8.5e-07       3      42 .]     525     564 .]     524     564 .] 0.96

  Alignments for each domain:
  == domain 1  score: 28.6 bits;  conditional E-value: 1.9e-10
                 HHHHHHHHHSTTS-HHHHHHHHHHCTTTHHHHHHHHHHCC CS
         CUE   3 qmletLkemFPdldeevIravLrasngnvEatinaLLegs 42 
                 +++  L+ mFP +d+evI+ vL a+ g++   i++LLe+s
  EPX74057.1 525 EAIAALQAMFPAFDSEVIEVVLNAQEGRLTSSIDSLLEMS 564
                 57889**********************************7 PP

>> Basic  Myogenic Basic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.3      0.88     4e+03      20      38 ..      25      49 ..      11      92 .. 0.41
   2 ?   -0.9   0.0      0.85   3.8e+03      64      74 ..     268     278 ..     209     279 .. 0.69
   3 ?   10.6   0.2   0.00023         1       5      46 ..     349     390 ..     346     463 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.88
       Basic 20 ldnsrlqgldaa......llkeres 38
                ++++ l +ld +      +++++++
  EPX74057.1 25 GEEKPLITLDDNldvqklAYEQHNK 49
                4444444444332222332222221 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.85
       Basic  64 aGqCLlWACKv 74 
                 +  CL+  CKv
  EPX74057.1 268 KIICLMNCCKV 278
                 44699999997 PP

  == domain 3  score: 10.6 bits;  conditional E-value: 0.00023
       Basic   5 etncyffpdqrfledldnsrlqgldaallkeresl.slcaegr 46 
                 +tn++++++++f ++ + ++lq+++a+++kere l  ++ ++r
  EPX74057.1 349 DTNSLTISEEEFNDEIE-KSLQKMEAKTIKEREILpPISLNTR 390
                 9****************.9*************97654444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (564 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       868  (0.0484132); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 4093.85
//
Query:       EPX74058.1  [L=549]
Description: asparagine synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.4e-18   66.9   0.1    1.6e-11   44.4   0.2    3.1  3  Asn_synthase  Asparagine synthase
    3.9e-11   42.9   0.0    9.4e-11   41.7   0.0    1.6  1  GATase_7      Glutamine amidotransferase domain
    7.9e-08   32.6   0.0    1.7e-07   31.5   0.0    1.6  1  GATase_6      Glutamine amidotransferase domain
  ------ inclusion threshold ------
      0.077   12.4   0.0       0.14   11.6   0.0    1.4  1  DUF3700       Aluminium induced protein


Domain annotation for each model (and alignments):
>> Asn_synthase  Asparagine synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.0   0.00095       4.2      20      72 ..     260     314 ..     257     327 .. 0.89
   2 !   12.3   0.1   2.2e-05     0.099     119     145 ..     412     437 ..     399     441 .. 0.85
   3 !   44.4   0.2   3.7e-15   1.6e-11     203     299 ..     439     539 ..     436     549 .] 0.89

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.00095
  Asn_synthase  20 vGalLSGGlDSSliaalaarqsk..splktFsigfeekgsdeakyakevaehlgt 72 
                   +++l SGG+D ++ia +    ++  +p+    ++fe++++ ++ + + +a+++ +
    EPX74058.1 260 LAVLYSGGVDCGVIARIIHDILPpnEPIDLINVAFENPRFMDTFVNADAADCFTS 314
                   67889******************999*********99999999999999988865 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 2.2e-05
  Asn_synthase 119 vkvvLsGeGaDElfgGYpyfykaalsr 145
                    kv++sG GaDE  gGY  ++ +a  r
    EPX74058.1 412 AKVLFSGLGADEQLGGYM-RHLRAFER 437
                   79***************8.99988554 PP

  == domain 3  score: 44.4 bits;  conditional E-value: 3.7e-15
  Asn_synthase 203 gedelhrelyldlktllpgdllrkDrasmahglEaRvPflDhrlvevalrlppelklrg...gieKyiLRealegylPeeileRpKegfsapvgewk 296
                   g + l++el ld++++ + +l r Dr +  +g E+R+PflD rl+ +  ++p + k+r    g +K iLRe+++++  + + + +K++ + ++++ k
    EPX74058.1 439 GMEGLDEELKLDIERIPHRNLGRDDRVMSNQGKEVRYPFLDERLMALLSKMPTSSKMRLdlvGGDKLILRELARKLQTPLVGQEKKRAIQFGSKAAK 535
                   567899*********************************************************************8888888888998888888877 PP

  Asn_synthase 297 lk.g 299
                   ++ g
    EPX74058.1 536 MEsG 539
                   7655 PP

>> GATase_7  Glutamine amidotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.7   0.0   2.1e-14   9.4e-11      13     117 ..      66     166 ..      61     173 .. 0.88

  Alignments for each domain:
  == domain 1  score: 41.7 bits;  conditional E-value: 2.1e-14
    GATase_7  13 aQPmvssedgrlvivfnGeiyNykelreeLeakghrfrtksDtevllallea..ewgeealerlnGmfAfaiwdeeekrlllaRDrlGikPLyygedkg 109
                  QP v ++dg  v++ nGei        e     +++ ++ D + l ++l++  e +e++l+ ++G fAf+++++++++l+  RDrlG ++L y +++ 
  EPX74058.1  66 IQPHV-DDDG-NVLCWNGEIWQM---GGEAGFDSLQCCNENDGSKLFRILKEndEDVESVLRLIQGPFAFVYYQKSKNTLWFGRDRLGRRSLLYHQEQ- 158
                 59999.4566.6999****9865...45555566789999**********99999******************************************6. PP

    GATase_7 110 dallfaSe 117
                 +++++aS 
  EPX74058.1 159 ERFILASV 166
                 7****995 PP

>> GATase_6  Glutamine amidotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.5   0.0   3.9e-11   1.7e-07      32     133 ..      65     165 ..      42     166 .. 0.85

  Alignments for each domain:
  == domain 1  score: 31.5 bits;  conditional E-value: 3.9e-11
    GATase_6  32 a.qPfpsedgrlllvhNGeiynykelreelpalkglafrsrsDtevllalleelG...eevlerlrGmfafaiwdkrentlilardrlgvkplyyavde 126
                   qP    d++ +l  NGei + +    e+   + l++  ++D   l+++l+e +   e vl+ ++G faf+ ++k++ntl + rdrlg++ l y++++
  EPX74058.1  65 TiQPH-VDDDGNVLCWNGEIWQMG---GEAGF-DSLQCCNENDGSKLFRILKENDedvESVLRLIQGPFAFVYYQKSKNTLWFGRDRLGRRSLLYHQEQ 158
                 33898.6677778999*******8...33333.6677788***********88888888899************************************* PP

    GATase_6 127 sglafas 133
                 ++++ as
  EPX74058.1 159 ERFILAS 165
                 ****998 PP

>> DUF3700  Aluminium induced protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   3.2e-05      0.14     122     160 ..     117     155 ..     107     178 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 3.2e-05
     DUF3700 122 adqvvkdleGkfafvlydskaktvfvaldadgsvplyWG 160
                 ++ v++ ++G fafv y ++++t++  +d+ g+ +l + 
  EPX74058.1 117 VESVLRLIQGPFAFVYYQKSKNTLWFGRDRLGRRSLLYH 155
                 6789***********************999998887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (549 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       272  (0.015171); expected 358.6 (0.02)
Passed bias filter:                      262  (0.0146132); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 4101.34
//
Query:       EPX74059.1  [L=605]
Description: siderophore iron transporter 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-14   53.6  22.8    1.7e-14   53.2  22.8    1.1  1  TRI12     Fungal trichothecene efflux pump (TRI12)
    3.6e-13   49.2  43.9    3.6e-13   49.2  43.9    2.9  2  MFS_1     Major Facilitator Superfamily
  ------ inclusion threshold ------
        0.1   12.4   0.0       0.24   11.2   0.0    1.6  1  Pam17     Mitochondrial import protein Pam17
       0.57   10.1   9.7        0.2   11.6   0.6    3.6  3  UPF0126   UPF0126 domain


Domain annotation for each model (and alignments):
>> TRI12  Fungal trichothecene efflux pump (TRI12)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.2  22.8   3.8e-18   1.7e-14      75     483 ..     116     529 ..      63     553 .. 0.76

  Alignments for each domain:
  == domain 1  score: 53.2 bits;  conditional E-value: 3.8e-18
       TRI12  75 gqsensslfstlwttgqavsilv...mgrltdrfgrrpfvilthilglvgaivgctatkfntllaamtllgva.agpagasplfvgelmsnktkflgll 169
                    e +sl+ t+ t  + +s ++   + r++d fgr      + +l +vg i+ +t+++++t      l     +g      +f  +  s   + l + 
  EPX74059.1 116 SAFEGHSLLGTIGTANNIISAVIkppLARISDVFGRLEAFCFALLLYIVGLILIATSKNVQTYAGGSVLYNAGyTGLELIMTIFFADSSSTANRSLVIG 214
                 3458899999999999999988855579********999999999************999998777666543213444467889999999999999999 PP

       TRI12 170 ivsipvvvtsglspylgqrlaiqgswrwifyiy.iitsaiavllivv..wyyppsfaqlhgkkvrkree...lakldwigiilvivgvslfllgvswgg 262
                 i   p vvt   +p +    + + +wrw + ++ ii+   a+ +i+   +y    +++   k++   +    + kld ig+il+++g sl+ll +s   
  EPX74059.1 215 ISYFPFVVTVWTGPKISP--SFENNWRWGIAMWcIILPVCALPFIISyaYYQYKGWREGAFKNTLTMNVvtlFKKLDIIGLILLTAGFSLVLLTISVAS 311
                 999*******99999975..7899****77776155555566666541134455666666666555443111579************************ PP

       TRI12 263 kpnspwnsakviglissglgslvvfalyevygkpvrpivppalfkdtrgfvcillissimgamnlslviiypqqvvnifgsslknweetawmsatasfg 361
                    + w+ ak i +i  g  + + f lye+y     p +p  l+++   + +   is+++     +    y   +     +sl     +++++ t s+ 
  EPX74059.1 312 YEGDKWKDAKFIVMIIVGGVCSIAFVLYEIYIA-SFPAIPFELMREPT-IAAACAISALFYMAFYCWDNYYSSFLQVAHYTSLTA---ATYIAYTYSIT 405
                 *************9999999999********75.679******99854.444456899988888999998888776666777765...55666677777 PP

       TRI12 362 tgagvvvlgslfhlvrhirwqilvgalwltaflgamssv..nrdnknaaialsvlsgfvvawaqditmllvqfittdedlgvafavvaaarpfagsift 458
                 + +  ++lg ++h+ +  +   l+         g m     ++ n    i   ++ g+  +   +i  + vq +   e++ +  a+v +  p+ g+i +
  EPX74059.1 406 SCTTGIILGIIIHFHKRFKIYFLLAVPVYILGQGLMIRYrgEKYNYGYLIMTQLIVGIGGGIISNILTVSVQTVVKREHFAIVTALVLTITPLGGAIGS 504
                 777779*****99977666555554433333345554441134444456777777888888889999999***************************** PP

       TRI12 459 aafislysnrypkelashlssalrg 483
                 a   ++++   pk+l   l   ++ 
  EPX74059.1 505 AISGAIWTSVMPKQLQKLLPNDMKD 529
                 ***************9999888864 PP

>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.2  43.9   7.9e-17   3.6e-13       2     352 ..      94     503 ..      92     504 .. 0.78
   2 ?   -3.0   0.1      0.58   2.6e+03     160     180 ..     570     590 ..     563     597 .. 0.52

  Alignments for each domain:
  == domain 1  score: 49.2 bits;  conditional E-value: 7.9e-17
       MFS_1   2 llaaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfa.sslwlllvlrvlqGlga 99 
                 +l  fl+    si++++l+++ ++++   +s +g++ t+  + +av  +pl+r+sd fGr   ++++lll+++g l+l+ +  ++ + + + vl  +g+
  EPX74059.1  94 FL-MFLVLSFQSIAYSSLSSYATSAFE-GHSLLGTIGTANNIISAVIKPPLARISDVFGRLEAFCFALLLYIVG-LILIATsKNVQTYAGGSVLYNAGY 189
                 44.45555555555555555999****.**********************************************.55552347777************* PP

       MFS_1 100 galfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafv...lfllll.........peepperkrkspke 186
                  +l  ++ +++ad ++  +r+++ig+ +  f + +  gp +++ +  +  Wr+   + +i++ ++++   + ++++         +            +
  EPX74059.1 190 TGLELIMTIFFADSSSTANRSLVIGISYFPFVVTVWTGPKISPSFENN--WRWGIAMWCIILPVCALpfiISYAYYqykgwregaF------------K 274
                 *******************************************99855..666655555555555442115555555444433331............2 PP

       MFS_1 187 ee................................................................kgtgpaplvpawkallkdpvlwillialllfff 221
                                                                                      + +p++p +++++ +     + ++++lf +
  EPX74059.1 275 NTltmnvvtlfkkldiiglilltagfslvlltisvasyegdkwkdakfivmiivggvcsiafvlyeIYIASFPAIP-FELMREPTIAA-ACAISALFYM 371
                 2244556666777788888888888999999999989988888889999999999999999999999999999999.99999999443.3344444445 PP

       MFS_1 222 gfsglltllplylqevlglsglllaglllallalvgail.allagrlsdrlgr.rrrlllallllllaalglallavt.ssavllllvlvliGfglgfv 317
                 +f+    +  ++  +v +++  l+a++++a ++ ++ +  ++++g +++  +r +++ lla+++ +l+  +++       ++  l++  +++G+g+g++
  EPX74059.1 372 AFYCWDNYYSSF-LQVAHYT-SLTAATYIAYTYSITSCTtGIILGIIIHFHKRfKIYFLLAVPVYILGQGLMIRYRGEkYNYGYLIMTQLIVGIGGGII 468
                 666688888887.8999999.4666666666666655555999999996544446677777777888887777777774455555557788******** PP

       MFS_1 318 fpsllalasdlappeeagtasglfntagslggalg 352
                 + +l++ ++ ++ +e+ + +++l+ t+  lgga+g
  EPX74059.1 469 SNILTVSVQTVVKREHFAIVTALVLTITPLGGAIG 503
                 *********************************99 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 0.58
       MFS_1 160 vsllafvlfllllpeepperk 180
                  ++ +++l+ +++ ++p+ ++
  EPX74059.1 570 TGFAGAILIPMWFIANPSLKA 590
                 333444445555555555555 PP

>> Pam17  Mitochondrial import protein Pam17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   5.3e-05      0.24      34     126 ..     449     545 ..     440     569 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 5.3e-05
       Pam17  34 ielvasivtallglllgaavlstleidptqqilglDplvvlglatlasgalGwllGpvlgsavfkllnrkklkq.....leekekeFlerikknRvdp 126
                 ++ +  i+t l  + +g  ++s++ + ++q+++  + + ++++ +l+++ lG  +G+++  a+++ +  k+l++     ++ k +  ++ +k++   p
  EPX74059.1 449 YNYGYLIMTQL-IVGIGGGIISNILTVSVQTVVKREHFAIVTALVLTITPLGGAIGSAISGAIWTSVMPKQLQKllpndMKDKSSTIFNNLKEQLKYP 545
                 55555555554.46677788899888899************************************999998887566667788888888877765555 PP

>> UPF0126  UPF0126 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       2.4   1.1e+04       3      12 ..     288     297 ..     286     299 .. 0.74
   2 ?    2.0   1.1     0.041   1.9e+02      52      77 ..     349     374 ..     323     375 .. 0.89
   3 ?   11.6   0.6   4.4e-05       0.2      25      71 ..     450     494 ..     438     499 .. 0.74

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 2.4
                 HHHHHHHHHH CS
     UPF0126   3 ldaiGlaafa 12 
                 ld+iGl++ +
  EPX74059.1 288 LDIIGLILLT 297
                 7888888765 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.041
                 SSGHHHSSTCHHHHHHHHHHHHHHHH CS
     UPF0126  52 vPvvllreelyataallgalvvvlla 77 
                 +P+ l+re+  a+a+++ al++++++
  EPX74059.1 349 IPFELMREPTIAAACAISALFYMAFY 374
                 588899999*************9986 PP

  == domain 3  score: 11.6 bits;  conditional E-value: 4.4e-05
                 -HHHHHHHHHHHHHHHHHHHHHHTTSSSSGHHHSSTCHHHHHHHHHH CS
     UPF0126  25 dllgvvvlGvvTAvgGGvlRDvllgrevPvvllreelyataallgal 71 
                 ++   ++  ++ ++gGG++ ++l+ + v  v+ re++ +++al+  +
  EPX74059.1 450 NYGYLIMTQLIVGIGGGIISNILTVS-VQTVVKREHFAIVTALVL-T 494
                 555667777899*************5.999998874545555543.3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (605 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       908  (0.0506442); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.68u 0.32s 00:00:01.00 Elapsed: 00:00:00.49
# Mc/sec: 3715.94
//
Query:       EPX74060.1  [L=22]
Description: ribosomal protein subunit L39 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (22 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       230  (0.0128284); expected 358.6 (0.02)
Passed bias filter:                      146  (0.00814323); expected 358.6 (0.02)
Passed Vit filter:                         7  (0.000390429); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.27s 00:00:00.59 Elapsed: 00:00:00.42
# Mc/sec: 157.24
//
Query:       EPX74061.1  [L=648]
Description: ATP-dependent RNA helicase Mak5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.6e-43  147.0   0.2    9.8e-43  145.9   0.2    1.5  1  DEAD           DEAD/DEAH box helicase
    1.2e-32  112.5   0.1    6.7e-29  100.5   0.0    3.3  3  Helicase_C     Helicase conserved C-terminal domain
    5.9e-11   42.7   0.0    1.7e-10   41.2   0.0    1.8  1  ResIII         Type III restriction enzyme, res subunit
     0.0045   17.3   0.7      0.022   15.0   0.7    2.3  1  AAA_22         AAA domain
  ------ inclusion threshold ------
      0.023   14.5   0.0       0.06   13.2   0.0    1.7  1  Helicase_RecD  Helicase
      0.031   14.7   0.3       0.14   12.6   0.2    2.1  1  AAA            ATPase family associated with various cellular
      0.073   11.8   1.0        9.3    4.9   0.2    2.8  3  UTP25          Utp25, U3 small nucleolar RNA-associated SSU p


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.9   0.2   3.8e-46   9.8e-43       1     173 [.     144     315 ..     144     318 .. 0.93

  Alignments for each domain:
  == domain 1  score: 145.9 bits;  conditional E-value: 3.8e-46
                 -HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   1 tdiQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvd 99 
                 t+iQ+ ++p++  g+d++++a+TGsGK+laf+ip++++ ++  ++++ +al+++PtreLa+q l++++k+k   +lr+++i+gg a ++q++ l+++++
  EPX74061.1 144 TPIQSLVVPEATAGKDIVGKAATGSGKSLAFAIPIMEHCLNVLDTKQVQALVIAPTRELAHQLLEHFEKVKPDSSLRIMAITGGLAVQKQQRLLSKHPH 242
                 89*************************************999899999*************************99*******************999** PP

                 EEEEEHHHHHHHHHCTSSH..CTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTST.TTSEEEEEESSBSHHH CS
                 xxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxx RF
        DEAD 100 ivvgtpgrlddllstgkln..lsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgk.lqrqvivlSATlpkdv 173
                 iv++tpgrl +++++++l+  ++++++lVlDEadrll+++  +++++++  l     + k  +rq++++SATl + +
  EPX74061.1 243 IVIATPGRLWSVINDNNLTenFKKIKILVLDEADRLLQKSHFEDLQKLMDVLG----NPKhTNRQTLIFSATLDDHL 315
                 *************87777666**************************999993....33336788********8655 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.9   0.0    0.0063        16       4      62 ..     180     240 ..     177     248 .. 0.77
   2 ?    2.0   0.0     0.098   2.5e+02       4      35 ..     288     319 ..     284     342 .. 0.72
   3 !  100.5   0.0   2.6e-32   6.7e-29       1     111 []     373     481 ..     373     481 .. 0.93

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0063
                 HHHHHHHHHTTTTSEEEEEESSHHHHHH.HHHHHHHT...TSTEEEESTTSTHHHHHHHHHHH CS
  Helicase_C   4 eallellkleeeggkilifvntidrlek.vklllekk...gikvavlhgelpqnereeileqf 62 
                 e++l+ l    ++ ++l++++t++ +++ ++ +++ k   ++++ +++g l  +++++ l++ 
  EPX74061.1 180 EHCLNVL--DTKQVQALVIAPTRELAHQlLEHFEKVKpdsSLRIMAITGGLAVQKQQRLLSKH 240
                 7888887..78999**********77645444433336669**********999999999876 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.098
                 HHHHHHH.HHTTTTSEEEEEESSHH.HHHHHHHH CS
  Helicase_C   4 eallell.kleeeggkilifvntid.rlekvkll 35 
                 ++l++ l + ++ ++++lif+ t d +l+  + l
  EPX74061.1 288 QKLMDVLgNPKHTNRQTLIFSATLDdHLQ--QRL 319
                 5566666777899**********997554..333 PP

  == domain 3  score: 100.5 bits;  conditional E-value: 2.6e-32
                 HHHHHHHHHHHHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHH CS
  Helicase_C   1 dkleallellkleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvts 99 
                 +k ++l++ll   +  gk+++f+n id++++++ +l++  +++ +lh++l q++r+++le+f+k+   vLi+tdva+rGid+p+v++Vi++++p + + 
  EPX74061.1 373 EKDLHLYYLL--LRYPGKTMVFANGIDDIKRISPFLNELRVEAYPLHAQLDQKKRLQSLERFKKNPKGVLICTDVAARGIDVPSVSHVIHYHVPHTADM 469
                 5889999997..799************9987666667779**********************999988******************************* PP

                 HHHHHTTSSSTT CS
  Helicase_C 100 yiqriGRtgRag 111
                 yi+r+GRt+Ra+
  EPX74061.1 470 YIHRSGRTARAN 481
                 **********96 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.2   0.0   6.7e-14   1.7e-10      27     169 ..     160     311 ..     130     313 .. 0.81

  Alignments for each domain:
  == domain 1  score: 41.2 bits;  conditional E-value: 6.7e-14
                 EEEEESTTSTHHHHH.HHHHHHH-S.......-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--........-SEEEEEHHHHHHTH... CS
      ResIII  27 glikmaTGtGKTlva.aklierllkkgkee..kflflvprkslleqtleefkkflseaykeigkkvsgdkkka.kekdstnkkilvttiqsldadseee 121
                 ++ k+aTG+GK+l   + ++e++l+  + +  ++l+++p+++l  q+le+f+k++++   +i+ ++ g   ++ ++  s++ +i+++t  +l + +   
  EPX74061.1 160 IVGKAATGSGKSLAFaIPIMEHCLNVLDTKqvQALVIAPTRELAHQLLEHFEKVKPDSSLRIMAITGGLAVQKqQRLLSKHPHIVIATPGRLWSVI--- 255
                 55689********99899*******998888899************************9997777666555554456799****************... PP

                 .....HHHTTT-SEEEEETGGGTTS.TTTHHH...HHT-.....--SEEEEEESS- CS
      ResIII 122 eeeseellrdrfdviiiDEaHrlgakkswrei...lekf.....keavllglTATp 169
                 + ++ +   +++++++ DEa rl +k++++ +   ++ +      +   l ++AT+
  EPX74061.1 256 NDNNLTENFKKIKILVLDEADRLLQKSHFEDLqklMDVLgnpkhTNRQTLIFSATL 311
                 6777777777788************8666554222333232222337778888886 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.7   8.7e-06     0.022      91     119 ..     257     299 ..     163     315 .. 0.57

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 8.7e-06
      AAA_22  91 v.........ielliiDEaqh.lrseealeeLrsllnl.....s 119
                 +         i++l++DEa++ l ++ ++e+L +l+++     +
  EPX74061.1 257 DnnltenfkkIKILVLDEADRlL-QKSHFEDLQKLMDVlgnpkH 299
                 0333444468999********55.9*********9998887643 PP

>> Helicase_RecD  Helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   2.3e-05      0.06       4      99 ..     164     275 ..     161     293 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.3e-05
  Helicase_RecD   4 AdRGRGKSaalGlalaa....liaegksnilvtapskenvktlfeflakglealglke............eekkkkaekaelrvrkqrieyiapde 83 
                    A+ G GKS a ++ + +    ++ +++++ lv ap++e +++l+e+++k   + +l+             ++  +k+ ++ +++ ++    i+ ++
     EPX74061.1 164 AATGSGKSLAFAIPIMEhclnVLDTKQVQALVIAPTRELAHQLLEHFEKVKPDSSLRImaitgglavqkqQRLLSKHPHIVIATPGRLWSVINDNN 259
                    899*********977641111566777********************9998877777688888877543222222333334444488888899999 PP

  Helicase_RecD  84 llklkeqadllvvDEA 99 
                    l ++ ++ ++lv DEA
     EPX74061.1 260 LTENFKKIKILVLDEA 275
                    9999999999****99 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.2   5.6e-05      0.14      38     120 ..     243     320 ..     201     328 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 5.6e-05
                 STTHHHHHHHHHHHHHHHTS...TSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTSSSTEEEEEEESSGGGSTHHHH CS
         AAA  38 yvgesekkirelfkeakeka...kpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkkeskvivigatnrpdkldpall 120
                 +v +++ ++  ++++    +   k +il++DE+d+l +++       + + +++L+ +l + k+  ++ ++i  ++  d+l++ l 
  EPX74061.1 243 IVIATPGRLWSVINDNNLTEnfkKIKILVLDEADRLLQKS-------HFEDLQKLMDVLGNPKHT-NRQTLIFSATLDDHLQQRLS 320
                 56666666666666632222464559***********999.......556688999999999996.66889999988888888776 PP

>> UTP25  Utp25, U3 small nucleolar RNA-associated SSU processome protein 25
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.25   6.4e+02      77     100 ..     192     215 ..     188     221 .. 0.82
   2 ?    4.9   0.2    0.0036       9.3     206     266 ..     262     322 ..     229     332 .. 0.70
   3 ?    4.0   0.0    0.0069        18     330     416 ..     386     470 ..     379     484 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.25
       UTP25  77 kvLillptreaalevvelllklle 100
                 + L+++ptre a++++e++ k+ +
  EPX74061.1 192 QALVIAPTRELAHQLLEHFEKVKP 215
                 679************998877655 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.0036
       UTP25 206 Qnwehvet.vlkhlnkipkeshdadfsrvrmwylddqakllRQtlvfssyetpeinslfnsk 266
                  n+++++  vl++ +++ ++sh  d++++   +l + +++ RQtl+fs+  + ++++ +++k
  EPX74061.1 262 ENFKKIKIlVLDEADRLLQKSHFEDLQKLM-DVLGNPKHTNRQTLIFSATLDDHLQQRLSKK 322
                 455555532677777777888888888774.4566666677888888877777666666555 PP

  == domain 3  score: 4.0 bits;  conditional E-value: 0.0069
       UTP25 330 ssgiliyipsyfdfvrvrnylkeekvsfaaiseysskkevsraRelFfkgkkkvlLyteRlhffrRykikgvkkvilYklPenpefy 416
                  ++++++     d  r++ +l+e +v+   ++   ++k+  +  e F+k+ k vl+ t+ +   r  ++  v++vi Y++P+ + +y
  EPX74061.1 386 PGKTMVFANGIDDIKRISPFLNELRVEAYPLHAQLDQKKRLQSLERFKKNPKGVLICTDVAA--RGIDVPSVSHVIHYHVPHTADMY 470
                 578999999999999********999999999999999999999***************885..99****************99998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (648 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1365  (0.0761336); expected 358.6 (0.02)
Passed bias filter:                      728  (0.0406046); expected 358.6 (0.02)
Passed Vit filter:                        73  (0.00407162); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.74u 0.28s 00:00:01.02 Elapsed: 00:00:00.45
# Mc/sec: 4332.20
//
Query:       EPX74062.1  [L=894]
Description: CAMK/CAMKL/KIN1 protein kinase Kin1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-68  231.0   1.6    1.6e-67  227.7   1.6    2.1  1  Pkinase         Protein kinase domain
    1.6e-37  129.2   0.3    9.2e-37  126.7   0.3    1.9  1  Pkinase_Tyr     Protein tyrosine kinase
      3e-18   65.3   0.0    5.8e-18   64.4   0.0    1.5  1  KA1             Kinase associated domain 1
    4.2e-07   29.2  14.5    5.3e-07   28.9   0.4    2.2  2  Haspin_kinase   Haspin like kinase domain
    7.9e-07   28.7   0.0    2.1e-06   27.3   0.0    1.7  2  Kinase-like     Kinase-like
    1.3e-06   27.9   0.1    2.7e-06   26.9   0.1    1.5  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
    0.00098   18.8   1.0     0.0021   17.7   1.0    1.5  1  RIO1            RIO1 family
     0.0019   18.2   0.1      0.042   13.8   0.1    2.0  2  APH             Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.059   12.9   1.2       0.11   12.0   0.0    1.9  2  YrbL-PhoP_reg   PhoP regulatory network protein YrbL
       0.18   12.0   0.2       0.38   10.9   0.2    1.5  1  ABC1            ABC1 family
        1.3    7.7   6.6        0.1   11.3   0.8    2.1  2  Pkinase_fungal  Fungal protein kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  227.7   1.6   9.6e-71   1.6e-67       1     264 []     120     389 ..     120     389 .. 0.92

  Alignments for each domain:
  == domain 1  score: 227.7 bits;  conditional E-value: 9.6e-71
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH..................HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--T CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkke..................kkvlrEikilkklkhpnivrlyevfeekdelylvleyve 81 
                 y+  +++G Gs+GkV  a++ +tg++vA+K++ +++ + +k                    +++rE ++   l+hp+i++  +v+ +++++y+ +e+v+
  EPX74062.1 120 YVLGKTIGAGSMGKVKAAHHIKTGEQVAIKIVVRQNLDCQKSkvssqealkaaqseknreIRTVREAALSTLLRHPYICEARDVYITSSHYYIAFEFVD 218
                 567899*************************9888877766667788899999988887778889999999999************************* PP

                 TEBHHHHHHHHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHHTTSCB.SHHHH CS
     Pkinase  82 ggeladllerkgslseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelessskltsfvgtseYlAPEvlkeney.skkvD 179
                 gg++ d++  +g+l+e++a+k+++qi ++l+ylH+++i+HrDlK eNiLi+++g++Ki+DFGl++ + ++s+l++f+g+ ++ APE+l++++y +++vD
  EPX74062.1 219 GGQMLDYIISHGKLKEKQARKFVRQIGSSLKYLHHNSIVHRDLKIENILISKNGDIKIIDFGLSNLYMRQSRLRTFCGSLYFAAPELLSAQPYiGPEVD 317
                 ***9999999***************************************************************************************** PP

                 HHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 180 vWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 +Ws G++ly l++gk pf +++ +      l+      k    +k +++ +  +s ++k+ll+++l  dp kR + +e+l+hp++
  EPX74062.1 318 IWSFGIVLYVLVCGKVPFDDQNMSA-----LHA-----K---IKKGSVEYPAYLSADCKSLLSRMLVTDPLKRASLDEILNHPWM 389
                 *******************333333.....332.....2...234689999*********************************7 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.7   0.3   5.6e-40   9.2e-37       3     257 ..     122     385 ..     120     386 .. 0.86

  Alignments for each domain:
  == domain 1  score: 126.7 bits;  conditional E-value: 5.6e-40
                  EEEEEEEESSEEEEEEEEET.................TTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE-- CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkg.................ekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeepllivteyv 83 
                  lgk++G+G+ GkV  ++  +                 +k+k + + a+K  ++e+++e   + ++ea++ + l+hp i +   v++ +++++i +e+v
   EPX74062.1 122 LGKTIGAGSMGKVKAAHHIKtgeqvaikivvrqnldcQKSKVSSQEALKAAQSEKNRE--IRTVREAALSTLLRHPYICEARDVYITSSHYYIAFEFV 217
                  7899***********9998756666666666665555555555555666654433333..6677888888888************************* PP

                  TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE CS
  Pkinase_Tyr  84 kgGdLlkfLrkkekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk 181
                  +gG++l+++ ++   kl+ k+  +f+ q+ + ++yL+++++vHrdl   N+L+s+n  +ki DfGL++  +++++ +   +   ++ + apE l+++ 
   EPX74062.1 218 DGGQMLDYIISH--GKLKEKQARKFVRQIGSSLKYLHHNSIVHRDLKIENILISKNGDIKIIDFGLSNLYMRQSRLR---TFCGSLYFAAPELLSAQP 310
                  ***********9..9*****************************************************996666665...34467899*******999 PP

                  .EEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 182 .ftsksDvWsfGvllwEiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfselve 257
                   +  + D+WsfG++l+ +++ g+ p+ + + + + +k+k+g  +e p++ +++ ++l+++ + +dp +R+++ e+++
   EPX74062.1 311 yIGPEVDIWSFGIVLYVLVC-GKVPFDDQNMSALHAKIKKG-SVEYPAYLSADCKSLLSRMLVTDPLKRASLDEILN 385
                  34689***********9998.********999999999987.5899**************************99976 PP

>> KA1  Kinase associated domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.4   0.0   3.5e-21   5.8e-18       2      45 .]     851     894 .]     850     894 .] 0.97

  Alignments for each domain:
  == domain 1  score: 64.4 bits;  conditional E-value: 3.5e-21
         KA1   2 vvkFEievcKlpelslygvrfkRlsGdtwqYkrlasqilseLkL 45 
                 v+ FEi+++K+p lsl g+ f+R+sG++wqYk las+il+eL+L
  EPX74062.1 851 VLTFEIYIVKVPILSLRGISFHRISGNSWQYKTLASRILNELNL 894
                 688***************************************98 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.9   0.4   3.2e-10   5.3e-07     122     260 ..     142     288 ..     104     296 .. 0.78
   2 ?    3.8   8.2     0.014        23       5      64 ..     578     649 ..     575     659 .. 0.81

  Alignments for each domain:
  == domain 1  score: 28.9 bits;  conditional E-value: 3.2e-10
  Haspin_kinase 122 kdkevvlKviplevledvtiskelsl........kelkslklvkgtypglllllqdkvlkekpdfyseqql.flvlllkdkGtdLeev....klks 204
                    + ++v++K++      d + sk++s         ++ ++++ v+ +   l  ll+  ++ e+ d+y +  + ++  ++ d+G+ L+ +    klk 
     EPX74062.1 142 TGEQVAIKIVVR-QNLDCQKSKVSSQealkaaqsEKNREIRTVREA--ALSTLLRHPYICEARDVYITSSHyYIAFEFVDGGQMLDYIishgKLK- 233
                    578899999876.445777777777767778877677788888888..78888888888888898876655167789*******98887553554. PP

  Haspin_kinase 205 wkqalsifwqivkiLyvaEtkfeFEHRdLhldniLvdknlnvtlidlklsRlesse 260
                     kqa +   qi ++L+    +    HRdL+++niL+ kn+ + +id+ ls l  ++
     EPX74062.1 234 EKQARKFVRQIGSSLKYLHHN-SIVHRDLKIENILISKNGDIKIIDFGLSNLYMRQ 288
                    589************999876.788*************************998554 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.014
  Haspin_kinase   5 lsleslksrssqsslkhktshssLqkf.........sssssessssnkislPvkdq....vsrdkikkklrns 64 
                     s e+  + ss s l++k+s s  ++f         sss ++s+s+ +is P++      vsr+k+  k+  s
     EPX74062.1 578 HSPETQSNMSSPSTLEKKSS-SIFRRFssrrkqsrsSSSTRSSTSTLQISAPLEATqspvVSRTKMGSKPPVS 649
                    67788888888889998866.889999****9999778888899999******98778889999999987665 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.1       1.7   2.8e+03      14      53 ..     120     160 ..     110     180 .. 0.77
   2 !   27.3   0.0   1.3e-09   2.1e-06     157     257 ..     248     342 ..     221     377 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.7
  Kinase-like  14 lvrgellkkgdrsvvfevkdqetgeplavkvfllps.eask 53 
                  +v g+ ++ g  ++v  ++  +tge++a+k+ + ++ +  k
   EPX74062.1 120 YVLGKTIGAGSMGKVKAAHHIKTGEQVAIKIVVRQNlDCQK 160
                  6788999999999999999999***9999998877744433 PP

  == domain 2  score: 27.3 bits;  conditional E-value: 1.3e-09
  Kinase-like 157 aanLqakglvhgkftvdnllldekgglmlggf..taLvragtkvvlsevekgfaPpEllgsrggytrknktkmthkldaWqlGlviyriwclklPltl 252
                    +L+++ +vh +++ +n+l  ++g +++ +f  ++L+    + +       fa pEll+++          +  ++d W  G+v y + c k+P++ 
   EPX74062.1 248 LKYLHHNSIVHRDLKIENILISKNGDIKIIDFglSNLYMRQSRLRTFCGSLYFAAPELLSAQP--------YIGPEVDIWSFGIVLYVLVCGKVPFDD 337
                  579**************************998335788888888844444889*******944........46779********************98 PP

  Kinase-like 253 ateea 257
                  +   a
   EPX74062.1 338 QNMSA 342
                  76555 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   0.1   1.7e-09   2.7e-06      94     176 ..     212     289 ..     170     293 .. 0.83

  Alignments for each domain:
  == domain 1  score: 26.9 bits;  conditional E-value: 1.7e-09
         Kdo  94 llterlegaqdLedllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDldkarlrlrad 176
                 +  e ++g q L+ ++  + +l+e+  r+ ++++g   + lh   + H+dl + nil+ +++     i +iD+  ++l +r+ 
  EPX74062.1 212 IAFEFVDGGQMLDYIIS-HGKLKEKQARKFVRQIGSSLKYLHHNSIVHRDLKIENILISKNG----DIKIIDFGLSNLYMRQS 289
                 66677888888888877.6889***************************************9....999****8877766655 PP

>> RIO1  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   1.0   1.3e-06    0.0021       8     150 ..     141     280 ..     133     286 .. 0.75

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 1.3e-06
                 TTTEEEEEEEE-S---SS-HHHHCTTTSTTSTCG--GS-HHHHHHHHHHHHHHHHHHHHHTT--S--EEEEETTE.EEEE--EETTEEGGBHHHCG.-H CS
        RIO1   8 edgkevaiKiyktstteFkkrkkyvsgekrfkdrksktnprklvklwaekEfrnLkrleeagvpvPkpielkrhv.lvmefigedgvaapklkdve.ee 104
                 ++g++vaiKi   + ++ +k k   ++  +  +   ++++++ ++++ e   + L r   +  ++ +++   +h  +  ef++  ++  + +++ + +e
  EPX74062.1 141 KTGEQVAIKIVVRQNLDCQKSKVSSQEALK--A--AQSEKNREIRTVREAALSTLLRHPYI-CEARDVYITSSHYyIAFEFVDGGQMLDYIISHGKlKE 234
                 578899999999998888877766666666..2..34555556677777777777776666.77788887777752789****7777777778877557 PP

                 HHHHHHHHHHHHHHHHHHHTSTEEESS-STTSEEEETT.EEEE--GT CS
        RIO1 105 eeaeelyeevleemrklykeaglvHaDLSeyNvlvded.kvviIDvs 150
                 ++a++ ++++ ++  k ++++ +vH DL   N+l++++ ++ iID++
  EPX74062.1 235 KQARKFVRQIGSS-LKYLHHNSIVHRDLKIENILISKNgDIKIIDFG 280
                 7778777777775.556669*****************99******96 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0     0.068   1.1e+02      63     106 ..     200     252 ..     162     254 .. 0.76
   2 !   13.8   0.1   2.6e-05     0.042     166     196 ..     254     282 ..     248     286 .. 0.81

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.068
                 -EEETTE...EEEEEE----EE-SS......HHHHHHHHHHHHHHHHHHCCHH CS
         APH  63 ddeeigl...lfalieyvpgrsllr......klsaaqlpellealgeflaalh 106
                  ++++ +   ++ ++e+v+g ++l+      kl ++q++++++++g+ l+ lh
  EPX74062.1 200 ARDVYITsshYYIAFEFVDGGQMLDyiishgKLKEKQARKFVRQIGSSLKYLH 252
                 33344445557789*****************999**********999999888 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 2.6e-05
                 EEEE-SS-SGGGEEEC..TTEEEEE---TT- CS
         APH 166 tvllHgDlhpgNllvdpddgrvtGviDfeda 196
                  +++H+Dl+  N+l+ ++++    +iDf+++
  EPX74062.1 254 NSIVHRDLKIENILISKNGDI--KIIDFGLS 282
                 689*************44444..5****986 PP

>> YrbL-PhoP_reg  PhoP regulatory network protein YrbL
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.3      0.95   1.6e+03      25      54 ..     145     177 ..     134     193 .. 0.63
   2 ?   12.0   0.0   6.8e-05      0.11     122     159 ..     238     275 ..     218     296 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.95
  YrbL-PhoP_reg  25 akliKvvkpee...iaarrrrkrllkqlqrekk 54 
                    + +iK+v +++   ++++   ++ lk+ q+ek+
     EPX74062.1 145 QVAIKIVVRQNldcQKSKVSSQEALKAAQSEKN 177
                    557999999995443444444455554444332 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 6.8e-05
  YrbL-PhoP_reg 122 aelkeaLdefleelldnhivtndlsakNivvkknsege 159
                     +  +++   l++l +n iv +dl+++Ni++ kn   +
     EPX74062.1 238 RKFVRQIGSSLKYLHHNSIVHRDLKIENILISKNGDIK 275
                    34456778889********************9997655 PP

>> ABC1  ABC1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.2   0.00023      0.38      17      43 ..     124     151 ..     121     203 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00023
        ABC1  17 ePiAaASiaqVhrAklk.sgeeVavKvq 43 
                 ++i+a+S+++V  A+   +ge+Va+K+ 
  EPX74062.1 124 KTIGAGSMGKVKAAHHIkTGEQVAIKIV 151
                 689***********87659*******85 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.8   6.4e-05       0.1     318     389 ..     247     309 ..     125     330 .. 0.81
   2 ?   -2.4   0.6      0.93   1.5e+03     242     267 ..     601     620 ..     558     678 .. 0.52

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 6.4e-05
  Pkinase_fungal 318 ghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlkge 389
                      ++ L+ +  i+HrD  ++Nili      ++    +iD+ l   + +   +s  r+  G l+F a e+l+++
      EPX74062.1 247 SLKYLH-HNSIVHRDLKIENILIS-----KNGDIKIIDFGLSNLYMR---QSRLRTFCGSLYFAAPELLSAQ 309
                     567899.9****************.....556778999999988885...4555678999999999998854 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.93
  Pkinase_fungal 242 ssssqelsskaevklkksesskkvek 267
                     +++s      ++ k+ +s+ss++ ++
      EPX74062.1 601 RRFS------SRRKQSRSSSSTRSST 620
                     1111......1111111111111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (894 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       655  (0.036533); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.72u 0.30s 00:00:01.02 Elapsed: 00:00:00.46
# Mc/sec: 5860.34
//
Query:       EPX74063.1  [L=385]
Description: lectin family glycoprotein receptor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.1e-34  118.3   0.1    4.7e-34  117.7   0.1    1.2  1  Lectin_leg-like  Legume-like lectin family
    0.00032   20.6   3.3    0.00078   19.4   3.3    1.6  1  TMF_DNA_bd       TATA element modulatory factor 1 DNA binding
     0.0076   16.6   1.5       0.48   10.8   0.2    2.3  2  CLZ              C-terminal leucine zipper domain of cyclic n
  ------ inclusion threshold ------
      0.015   14.9   1.0      0.023   14.2   1.0    1.2  1  Leu_zip          Leucine zipper
      0.075   13.1   0.9       0.21   11.7   0.9    1.7  1  DASH_Dad3        DASH complex subunit Dad3
       0.11   12.4   2.4        4.1    7.2   0.2    2.2  2  Bacillus_HBL     Bacillus haemolytic enterotoxin (HBL)
       0.12   12.6   2.5       0.72   10.1   2.5    2.1  1  TMF_TATA_bd      TATA element modulatory factor 1 TATA bindin
       0.31   11.0   1.8        6.5    6.8   0.2    2.3  2  Prefoldin_2      Prefoldin subunit
       0.57    9.9   2.2        1.5    8.6   2.2    1.7  1  Sarcolipin       Sarcolipin


Domain annotation for each model (and alignments):
>> Lectin_leg-like  Legume-like lectin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.7   0.1   2.4e-37   4.7e-34      18     227 ..      32     228 ..      23     231 .. 0.90

  Alignments for each domain:
  == domain 1  score: 117.7 bits;  conditional E-value: 2.4e-37
                      TSSBT.TEEEEET-EEESSEEEEE-SS....TTEEEEEEESS-BEESSEEEEEEEEEESS--SS-S-EEEEEEESSSSSCCSBTTB-SS-EEEE CS
  Lectin_leg-like  18 skalp.nWeyggsaildsnqirltsde....qskkGslwtkspvaleswevevsFrvtgseselegdglaiwytsergkegpvFgskdkfdGla 106
                      ++a+p +W++ g +++d++ + lt +     + + G+lw ++p+  + w +++s+++++se+   +  + +wyt+e   egp+ gs+d +dGl 
       EPX74063.1  32 DHAIPlQWKWLGTVDTDQKTLSLTDKTsqtgEDRYGALWANTPLSEDRWRMQTSYVAHASEN--DAVKFGLWYTNEPSPEGPICGSSDGWDGLL 123
                      6788989*****************99877777899*************************77..6777899*********************** PP

                      EEEE-S-TSCTTTSS-SSEEEEEEEESSC---GGGTTTTTESEEEE---BTESSEEEEEEEEETTEEEEEEETSCCSCCCTTEEEEEESSEE-- CS
  Lectin_leg-like 107 illdtydndngpdkknkptisamlndgsleydhekdgkaqelasCtadfrnkdvetlikikYdknaltvlidsgllenkndyklCfqvkevelP 200
                      i +++   d     ++k +++a+lnd s+++ ++ d++  ++a+Ct +   +d    + + Yd+       ++g l    + ++Cf+ ke+ lP
       EPX74063.1 124 IQQEV---D----LTGKLIVRALLNDRSISLSQFSDPDLVAFAKCTFE-DMSDKLIVADLAYDE-------ENG-LSLLINQQTCFSSKEILLP 201
                      ****7...3....4779******************************8.667777789*****5.......777.58888899*********** PP

                      SSBEEEEEEEESSSGGEEEEEEEEEEE CS
  Lectin_leg-like 201 tgyyfgvsaatgdlsdnhdvlsllllq 227
                      +gy++g+s++t ++++n  ++++++l+
       EPX74063.1 202 KGYFLGLSSTTSSAKQNIVLSNINVLS 228
                      ******************999999875 PP

>> TMF_DNA_bd  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   3.3   3.9e-07   0.00078      12      71 ..     260     318 ..     259     320 .. 0.90

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 3.9e-07
  TMF_DNA_bd  12 eqIaqLmeEGekLskkelklnntikkLrkknkelekeikelkkkleklekeleeleerlk 71 
                 ++I +L++E +kLs++   ln+ +k L  + + +   +++l+   + ++  l+ele+rlk
  EPX74063.1 260 QIISALQTEVQKLSSEIISLNQRLKDLHVTTAGSLDRLNSLS-SSQVSSDRLQELENRLK 318
                 68***************************************5.56677778888998887 PP

>> CLZ  C-terminal leucine zipper domain of cyclic nucleotide-gated channels
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.1      0.02        40      42      62 ..     264     284 ..     258     301 .. 0.66
   2 !   10.8   0.2   0.00024      0.48      38      70 ..     308     340 ..     303     341 .. 0.94

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.02
         CLZ  42 aLqtrlarLlaeyessqrkLk 62 
                 aLqt +++L +e  s +++Lk
  EPX74063.1 264 ALQTEVQKLSSEIISLNQRLK 284
                 566666666666666555555 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00024
         CLZ  38 ssLeaLqtrlarLlaeyessqrkLkqRitkLEk 70 
                  +L+ L++rl+ +l+ y+s  +   +R+tk Ek
  EPX74063.1 308 DRLQELENRLKTVLTTYSSDSESVAARLTKFEK 340
                 579****************************97 PP

>> Leu_zip  Leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   1.0   1.1e-05     0.023      76     215 ..     205     349 ..     201     359 .. 0.71

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 1.1e-05
     Leu_zip  76 hLklqaDiselenReLlEkiaefEekefkss...nkkeseelkkkkLePlnegGg..aeLLkkeierLkeenekLkerlkelEkqatsaleekskleka 169
                 +L l +  s  +   +l +i+ +  ++f ++    k+e++ + +++ eP  +g +  +  L++e+++L  e   L++rlk+l      +l+  + l+++
  EPX74063.1 205 FLGLSSTTSSAKQNIVLSNINVLSSNHFMTNqplFKSEKAPVVQTHNEPTRDGDSqiISALQTEVQKLSSEIISLNQRLKDLHVTTAGSLDRLNSLSSS 303
                 5556666666666666777777777777766444466677777888899998643114669******************************99999988 PP

     Leu_zip 170 lkelqkelgekkdekenskeiskleeklaelkldlektleektasa 215
                   + ++ ++ ++  k+  ++ s+ +e++a+  +++ek l ++ a++
  EPX74063.1 304 QVSSDRLQELENRLKTVLTTYSSDSESVAARLTKFEKDLASTVAKS 349
                 7777666666666666666677777777777777777776664333 PP

>> DASH_Dad3  DASH complex subunit Dad3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.9   0.00011      0.21      12      54 ..     269     323 ..     261     328 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00011
   DASH_Dad3  12 YerLaenlktLaselkeLasn............steeildgLReLErkiglvyTL 54 
                  ++L++++ +L+++lk+L  +            s++   d L+eLE+++ +v+T 
  EPX74063.1 269 VQKLSSEIISLNQRLKDLHVTtagsldrlnslsSSQVSSDRLQELENRLKTVLTT 323
                 3555555555555555555559999999999977888899************996 PP

>> Bacillus_HBL  Bacillus haemolytic enterotoxin (HBL)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.2    0.0021       4.1      88     137 ..     243     292 ..     228     307 .. 0.85
   2 ?    5.1   0.2    0.0093        19     101     146 ..     308     353 ..     295     363 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0021
  Bacillus_HBL  88 yktlveavdkkdkaellellekLqeeiqqnqkevkqlikeLkklklklak 137
                   +  +v++ ++ ++++ ++ +++Lq+e+q+ + e+ +l + Lk+l++ +a 
    EPX74063.1 243 KAPVVQTHNEPTRDGDSQIISALQTEVQKLSSEIISLNQRLKDLHVTTAG 292
                   555677778889999999***************************98876 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.0093
  Bacillus_HBL 101 aellellekLqeeiqqnqkevkqlikeLkklklklakdsknFktdv 146
                   + l el ++L++ +++++  ++++++ L+k++++la+ +++ ++++
    EPX74063.1 308 DRLQELENRLKTVLTTYSSDSESVAARLTKFEKDLASTVAKSSSHL 353
                   4566666889999**********************99887666555 PP

>> TMF_TATA_bd  TATA element modulatory factor 1 TATA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   2.5   0.00036      0.72      10      83 ..     258     320 ..     250     342 .. 0.62

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00036
  TMF_TATA_bd  10 svqlverlsseirrlEgElaslkeelerleaerdeareeivklmkeneelkelkkeleelekeleelqeryetl 83 
                  ++q+++ l++e+++l +E+ sl+++l+ l        + + +l++     + ++++l+ele+       r++t+
   EPX74063.1 258 DSQIISALQTEVQKLSSEIISLNQRLKDLHVTTAGSLDRLNSLSS----SQVSSDRLQELEN-------RLKTV 320
                  578888888888888888888888888887766666665555552....2222333333333.......33333 PP

>> Prefoldin_2  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.1     0.036        72       8      33 ..     263     288 ..     259     298 .. 0.78
   2 ?    6.8   0.2    0.0032       6.5      62     103 ..     305     346 ..     299     349 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.036
                  HHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Prefoldin_2   8 qqlqqqlqqlaqqikqletqlkelel 33 
                  + lq ++q+l ++i +l+++lk+l+ 
   EPX74063.1 263 SALQTEVQKLSSEIISLNQRLKDLHV 288
                  56788888888888888888887765 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0032
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT CS
  Prefoldin_2  62 evkeeLeerketlekeiktlekqleklekeleelkeelqkkl 103
                     ++L+e +++l+++++t+++  e++ ++l+++++ l + +
   EPX74063.1 305 VSSDRLQELENRLKTVLTTYSSDSESVAARLTKFEKDLASTV 346
                  5678999999**************************998766 PP

>> Sarcolipin  Sarcolipin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   2.2   0.00075       1.5      10      21 ..     353     364 ..     351     367 .. 0.95

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00075
  Sarcolipin  10 lNFTvVLITViL 21 
                 lNFT VLI ViL
  EPX74063.1 353 LNFTNVLIVVIL 364
                 9**********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (385 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1267  (0.0706676); expected 358.6 (0.02)
Passed bias filter:                      840  (0.0468515); expected 358.6 (0.02)
Passed Vit filter:                       125  (0.00697194); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.62u 0.26s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 2662.85
//
Query:       EPX74064.1  [L=141]
Description: 60S ribosomal protein L25 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      8e-22   77.2   7.4      8e-22   77.2   7.4    1.7  2  Ribosomal_L23eN  Ribosomal protein L23, N-terminal domain
    4.6e-15   55.8   2.9    4.6e-15   55.8   2.9    2.4  2  Ribosomal_L23    Ribosomal protein L23
  ------ inclusion threshold ------
      0.014   14.6   0.1       0.63    9.1   0.1    2.1  2  HpcH_HpaI        HpcH/HpaI aldolase/citrate lyase family


Domain annotation for each model (and alignments):
>> Ribosomal_L23eN  Ribosomal protein L23, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.2   7.4   1.3e-25     8e-22       3      51 .]       4      52 ..       2      52 .. 0.97
   2 ?   -2.6   0.7       1.1   6.7e+03      18      18 ..     103     103 ..      89     124 .. 0.54

  Alignments for each domain:
  == domain 1  score: 77.2 bits;  conditional E-value: 1.3e-25
  Ribosomal_L23eN  3 akAlkAkKavlkGthshkkrKirtsttFhrPKTLrlsRaPKYpRkSiph 51
                      kA+ A+Kav kG+h++  rK+rtsttF+rPKTL+lsR+PKY+RkS+ h
       EPX74064.1  4 GKAQGAQKAVQKGIHNKVARKVRTSTTFRRPKTLQLSRKPKYARKSVAH 52
                     69********************************************987 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.1
  Ribosomal_L23eN  18 s 18 
                      +
       EPX74064.1 103 D 103
                      1 PP

>> Ribosomal_L23  Ribosomal protein L23
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.2      0.36   2.2e+03      46      60 ..      22      36 ..       8      52 .. 0.52
   2 !   55.8   2.9   7.6e-19   4.6e-15       2      75 ..      61     122 ..      60     134 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.36
                   EEEEEEEEE--EBES CS
  Ribosomal_L23 46 VekVntlnvkgkkkr 60
                    +kV+t    ++ k 
     EPX74064.1 22 ARKVRTSTTFRRPKT 36
                   345666655555553 PP

  == domain 2  score: 55.8 bits;  conditional E-value: 7.6e-19
                    SEEEE--SHHHHHHHTT.E.EEEEE-SS-THHHHHHHHHHHHT--EEEEEEEEE--EBESSSSSEEBE--EEEEE CS
  Ribosomal_L23   2 vilkPvitEkstklaek.nkyvFeVakdanKleikkaveklFgVkVekVntlnvkgkkkrvgrkvgrrksyKkai 75 
                    +i +P+ +E ++k+ e+ n++vF V+++anK  ik+av+kl++V+  k+nt+++++ +k+             a+
     EPX74064.1  61 IIDNPINSESAMKKIEDdNTLVFCVHMRANKNTIKAAVKKLYDVDAVKINTMVRPNGTKK-------------AF 122
                    7889************989**********************************9996665.............33 PP

>> HpcH_HpaI  HpcH/HpaI aldolase/citrate lyase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0    0.0052        31     170     201 ..      37      75 ..      21      85 .. 0.76
   2 ?    9.1   0.1   0.00011      0.63      42      77 ..      91     126 ..      85     136 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.0052
                 H.......HHHHHHHHTTHCEEEEEEE.E-SSHHHHHHH CS
   HpcH_HpaI 170 l.......dareriltaaraagiaaldtvasdiddaegf 201
                 l       +ar+++++a r  +++++d  +  +   +++
  EPX74064.1  37 LqlsrkpkYARKSVAHAPRLDEFKIIDNPINSESAMKKI 75 
                 334577779******************988877766665 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00011
                 HHHHHHHHHHHHHCTTTSSEEEEE-SSTTHHHHHHH CS
   HpcH_HpaI  42 RvlvsealkqldalaaaasevvVRvnsldselikqd 77 
                 ++++++a+k+l  + a++ +++VR+n++++ ++k  
  EPX74064.1  91 KNTIKAAVKKLYDVDAVKINTMVRPNGTKKAFVKLS 126
                 6899*********9****************999864 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       663  (0.0369792); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.29s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 986.30
//
Query:       EPX74065.1  [L=581]
Description: 2-isopropylmalate synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-73  247.5   0.0    2.8e-73  246.7   0.0    1.3  1  HMGL-like   HMGL-like
    1.9e-28   99.0   0.0    3.3e-28   98.2   0.0    1.4  1  LeuA_dimer  LeuA allosteric (dimerisation) domain


Domain annotation for each model (and alignments):
>> HMGL-like  HMGL-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  246.7   0.0   3.2e-77   2.8e-73       2     260 ..      45     325 ..      44     328 .. 0.97

  Alignments for each domain:
  == domain 1  score: 246.7 bits;  conditional E-value: 3.2e-77
                 -EEEE-TTTHHHHTSSS---HHHHHHHHHHHHHHT-SEE--TSGGGT.THHHHHHHS---TT-B......--EE-SSHHHHHHHHH....TT-SEEEEE CS
   HMGL-like   2 vkivdttLRDGeqalkaalsveeklaiakaLdeagvdeiEvgfpaaseddfevvraiakavkka.r...ilalvrarekdikaavealkgagakrvhvf 96 
                 +++++t+LRDG+qal ++++ eekl+++k L ++g++eiEvgfp+as++df++vr ++++++   +   i al  +re++i++++eal+g +++++h++
  EPX74065.1  45 PRWLSTDLRDGNQALPDPMNGEEKLKYFKLLCNLGFKEIEVGFPSASQTDFAFVRHLVETPGLIpEdvtISALSPSREHLINRTIEALRGSKNATLHLY 143
                 689********************************************************9865423677****************************** PP

                 EES-HHHHHHHHSSTHHHHHHHHHHHHHHHHHTT-E..........TTT-BTTTBS--HHHHHHHHHHHHHH......T-SEEEEEETTS---HHHHHH CS
   HMGL-like  97 iatselhlkaklkkdreevakkaeeavkaarslgkd..........velsledasrtdleflaevveaaeea......GatriniaDtvGvltPneaae 179
                 +a+s l++ ++++ +r+e ++ a++  +a+++++k+           ++s+e++s+++++f +ev+ea++++       ++++n+++tv++ tPn +a+
  EPX74065.1 144 NAVSPLFRDVVFRNSRQETLELAKKGARAVTMATKHaaestptnwgFQYSPETFSDAEPDFSLEVCEAVKSIwnpstaKPIIFNLPATVEMSTPNTYAD 242
                 ************************999999999999999**********************************999999******************** PP

                 HHHHHHHHS-...GGGEEEEEB-TTS-HHHHHHHHHHTT--EEEEBTTS--SSBBB-BHHHHHHHHHHTT-B----HHHHHHH CS
   HMGL-like 180 lisalkervk..dkvilsvHcHndlGlAvantlaAveaGadrvdgtvnGlGeraGnaaleelvaalealgvdtgldlqklrsi 260
                 li++++++++  +kv++s+H+Hnd+G+Ava+++++  aGadrv+g+++G+Ger+Gn++l++l+ +l+++gv+++ld++kl ++
  EPX74065.1 243 LIEYFSTKISerEKVCVSLHPHNDRGTAVAAAELGQLAGADRVEGCLFGNGERTGNVDLVTLAFNLYTQGVSPNLDFSKLDEV 325
                 ********************************************************************************887 PP

>> LeuA_dimer  LeuA allosteric (dimerisation) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.2   0.0   3.7e-32   3.3e-28       2     132 ..     443     575 ..     442     576 .. 0.92

  Alignments for each domain:
  == domain 1  score: 98.2 bits;  conditional E-value: 3.7e-32
                 XXXXXXXXXXXXXXXXXX.--EEEEEEEEEEETTCEEEEEEEEEE.TTEE...EEEEEE-SSHHHHHHHHHHHHHHHT-EEEEEEEE--TT-TT--EEE CS
  LeuA_dimer   2 vtdedlealvkdelleae.erlkleklqvssgedelstatvklevkdgee...keasaeGnGpvdAllnAlrkalgvdikLldYsvhaitegtdaqaev 96 
                 +t  ++ +l+++++  +  +r++l++++ ss+   +++ ++ ++vk g+     +++++GnGp +A+++A+r+ +++ +++ +Ys+hai++g+ ++a++
  EPX74065.1 443 LTIGEISDLFNTTYFLEFpGRFSLDDYTLSSNGPRSKSISCVVDVK-GKNagrCVIEGSGNGPMSAVVDAMRRQFNIAFDIGQYSEHAIGSGNSVKAAS 540
                 677899*********9999***************999999999995.44446689******************************************** PP

                 EEEEE--GGGEEEEEEEESSHHHHHHHHHHHHHHHH CS
  LeuA_dimer  97 rVelevddgkkvsgvGvdsdiveASlkAlisalnrl 132
                 +Ve++ ++++ ++gvG+d+d++ + lkA++sa+ r+
  EPX74065.1 541 YVEIKCNNNS-FWGVGIDDDVTSSGLKAVMSAISRA 575
                 *****65555.**********************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (581 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       313  (0.0174578); expected 358.6 (0.02)
Passed bias filter:                      307  (0.0171231); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 4060.66
//
Query:       EPX74066.1  [L=392]
Description: sphingosine N-acyltransferase Lac1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-36  126.4  34.9    1.2e-36  126.4  34.9    1.7  2  TRAM_LAG1_CLN8  TLC domain
    1.3e-20   72.8   0.1    1.3e-20   72.8   0.1    2.2  3  TRAM1           TRAM1-like protein


Domain annotation for each model (and alignments):
>> TRAM_LAG1_CLN8  TLC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0      0.31   2.8e+03     133     151 ..     114     131 ..     105     147 .. 0.68
   2 !  126.4  34.9   1.3e-40   1.2e-36       1     198 []     152     357 ..     152     357 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.31
  TRAM_LAG1_CLN8 133 lfngllfllsFfvcRlvll 151
                     +f  ++++l+F ++R +++
      EPX74066.1 114 AF-CIFYALVFSFTREFIM 131
                     44.2455666777777666 PP

  == domain 2  score: 126.4 bits;  conditional E-value: 1.3e-40
  TRAM_LAG1_CLN8   1 kfdervvslvqyllstvfglivlsssp.......elwegyperilgathfllkayyllalgYfiydllvllly.ekkrkdfvemliHhiitlvll 87 
                     +f e+++ +++++++ ++gl v++++p       ++we+yp++++ a   ++ka+yl++++Y+i++ lvl+l+ ek rkdf+e+++Hhiitl+l+
      EPX74066.1 152 RFEEQAYTFLYFTMMGIWGLHVMKQTPiwyfntdAFWETYPHFTHFA---SFKAFYLVEASYWIQQALVLVLQlEKPRKDFKELVMHHIITLLLI 243
                     699***************************99999999999999988...****************5555544388999**************** PP

  TRAM_LAG1_CLN8  88 vlsyvrnlgrvglvvlllhelsdpflnlrkilsylkkkskssklvlfngllfllsFfvcRlvllpylillsildvaklslstap........lwl 174
                      +sy+++++ +gl+v+++++ sd++l++ k+l+yl +   s + v++  l+f+++++++R++l    i+ +   +a++++++ +        + +
      EPX74066.1 244 GCSYYFHFTWIGLAVFITMDTSDILLAFTKCLNYL-NV--SFVYVSY--LIFVFLWIYMRHYLSLKIIWSVLTSMATINSFELNwsaqyykcWIS 333
                     ***********************************.65..4456777..*************99998888888899888887779999***9*** PP

  TRAM_LAG1_CLN8 175 pliflilllvLqllnlyWfylivk 198
                     +++  +ll+ Lql+nlyW++li++
      EPX74066.1 334 QYGTAFLLISLQLVNLYWLFLILR 357
                     **********************97 PP

>> TRAM1  TRAM1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.8   0.1   1.5e-24   1.3e-20       5      63 ..      92     147 ..      88     148 .. 0.95
   2 ?   -4.9   1.7         2   1.8e+04      31      33 ..     290     292 ..     282     301 .. 0.51
   3 ?   -3.5   0.1      0.94   8.4e+03      37      48 ..     355     366 ..     352     366 .. 0.78

  Alignments for each domain:
  == domain 1  score: 72.8 bits;  conditional E-value: 1.5e-24
       TRAM1   5 ifLsynvplsansetglYgkGlkDlafvffyvivftflRaflmeyvlrPlarrlgikkk 63 
                 if+sy+vp    +++ +YgkG+ D+af +fy +vf+f+R+f+m+++l+Pl r+++i+k+
  EPX74066.1  92 IFISYPVP---GTSPVQYGKGPLDIAFCIFYALVFSFTREFIMQEILEPLGRHFHIHKQ 147
                 9*******...469******************************************997 PP

  == domain 2  score: -4.9 bits;  conditional E-value: 2
       TRAM1  31 fvf 33 
                 fvf
  EPX74066.1 290 FVF 292
                 222 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 0.94
       TRAM1  37 ivftflRaflme 48 
                 i+ ++ Raf+++
  EPX74066.1 355 ILRIGYRAFTTQ 366
                 677899999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (392 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       888  (0.0495287); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2920.12
//
Query:       EPX74067.1  [L=85]
Description: Sm snRNP core protein Smf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.7e-21   74.0   0.0    6.7e-21   73.8   0.0    1.1  1  LSM       LSM domain
     0.0018   18.4   0.0     0.0023   18.0   0.0    1.2  1  SM-ATX    Ataxin 2 SM domain


Domain annotation for each model (and alignments):
>> LSM  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.8   0.0   7.4e-25   6.7e-21       2      66 ..      11      74 ..      10      75 .. 0.97

  Alignments for each domain:
  == domain 1  score: 73.8 bits;  conditional E-value: 7.4e-25
                HHHHTTTSEEEEEETTSEEEEEEEEEEETTSEEEEEEEEEEETTETEEEEEEEEEEEGGGEEEEE CS
         LSM  2 flkklinkkvtvelkngrelrGtLkgfDqfmNlvLedveetlkdkkekrklglvliRGnnivlis 66
                fl++li+k  +v+lk+g+e+ GtL+++D +mNl+L ++ e+++++ ++ +lg+++iR+nn++ +s
  EPX74067.1 11 FLQELIGKPALVRLKWGQEYQGTLQSVDSYMNLQLLNAAEWVNGE-KTGDLGEIFIRCNNVLWVS 74
                9******************************************99.***************9987 PP

>> SM-ATX  Ataxin 2 SM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   2.6e-07    0.0023       8      43 ..      12      45 ..      11      63 .. 0.82

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 2.6e-07
                HHTTTTSEEEEEETTS-EEEEEEEEE-T..T--EEE CS
      SM-ATX  8 ltslvGkevevtvknGevyeGifstvslekdfsvvL 43
                l  l+Gk++ v++k G  y+G +++v++   +++ L
  EPX74067.1 12 LQELIGKPALVRLKWGQEYQGTLQSVDS--YMNLQL 45
                6789**********************99..555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       190  (0.0105974); expected 358.6 (0.02)
Passed bias filter:                      173  (0.00964917); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.42
# Mc/sec: 607.11
//
Query:       EPX74068.1  [L=224]
Description: SYF2 family splicing factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.9e-45  152.8  27.0    9.9e-45  152.8  27.0    1.8  2  SYF2         SYF2 splicing factor
  ------ inclusion threshold ------
       0.78    9.7   4.4          5    7.1   0.2    2.2  2  LAGLIDADG_2  LAGLIDADG DNA endonuclease family


Domain annotation for each model (and alignments):
>> SYF2  SYF2 splicing factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   1.7      0.46   4.2e+03      17      17 ..      24      24 ..       2      59 .. 0.45
   2 !  152.8  27.0   1.1e-48   9.9e-45       1     159 []      64     219 ..      64     219 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.46
        SYF2 17 e 17
                e
  EPX74068.1 24 E 24
                1 PP

  == domain 2  score: 152.8 bits;  conditional E-value: 1.1e-48
        SYF2   1 ekgedlerkkalewsaeeaekwekkkkkk.eknedagfsdyedaayrkYkkqlkelkpdleaYekqkekalekasavskeafyrtantlsladhkpsee 98 
                 e+ged++rk+a++w++ee+ekw+++ ++k ++++ a+f+dy+++a++ Y + ++elkpdl++Y+++ke++ +    +++ ++y++a++l+++++kp++e
  EPX74068.1  64 ENGEDYDRKRAWDWTIEESEKWDQRIRRKqQTKKAADFTDYHEQAQKDYMRGIRELKPDLQKYRNEKEQQND----QNSVSLYDEADRLDWVNNKPDKE 158
                 79**************************988899999*********************************99....44479****************** PP

        SYF2  99 avdrlveklekqeekrkkfsrrrkedeegdvtYINerNkkFNkklerfYdkytaeIrenLE 159
                 +vdrlve+++kq+ +r+k ++r+ + +e+++t+INerN+kFN kl+rfY +yt++I+e+LE
  EPX74068.1 159 KVDRLVEDIQKQDMRRQKNNKRKGQGNEDHITFINERNRKFNLKLQRFYSRYTKNIQEDLE 219
                 ************************************************************9 PP

>> LAGLIDADG_2  LAGLIDADG DNA endonuclease family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.6    0.0046        41      12      59 ..      87     134 ..      85     148 .. 0.71
   2 ?    7.1   0.2   0.00056         5      43      97 ..     163     219 ..     152     221 .. 0.80

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.0046
                  -EE.E-SSTTS-BEEEEEE..S-HHHHHHHHHHTGGG--S--EEEEEE- CS
  LAGLIDADG_2  12 gsl.ekrkkrknvrfefkqskkhkeYllyvfellkeyllsnpkivkrkt 59 
                   ++ +k++ +k + f  ++++++k+Y+  + el  ++  ++ + +++++
   EPX74068.1  87 QRIrRKQQTKKAADFTDYHEQAQKDYMRGIRELKPDLQ-KYRNEKEQQN 134
                  5565788999999**************99988755544.4444434443 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.00056
                  HTGGG--S--EEEEEE-TTS..EEEEEEEE---BGGGHHHHHHHBSSSSB---TTHH CS
  LAGLIDADG_2  43 llkeyllsnpkivkrktrrk..setklrfqtrslpcfnelaklfyskgkkiipknil 97 
                  l +++  +  + +k+++r++  +e  ++f       fn   + fys+  k i+++++
   EPX74068.1 163 LVEDIQKQDMRRQKNNKRKGqgNEDHITFINERNRKFNLKLQRFYSRYTKNIQEDLE 219
                  55556666666655555555789999***************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2195  (0.122427); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.29s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 1537.96
//
Query:       EPX74069.1  [L=440]
Description: chitin synthase regulatory factor Chr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.7e-12   45.7   6.9    6.6e-06   26.6   0.7    3.5  3  Sel1         Sel1 repeat
  ------ inclusion threshold ------
      0.021   15.3   0.5         14    6.3   0.0    2.8  2  TPR_19       Tetratricopeptide repeat
      0.058   11.9   0.2      0.089   11.3   0.2    1.2  1  Herpes_UL25  Herpesvirus UL25 family


Domain annotation for each model (and alignments):
>> Sel1  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.3   0.00012      0.71       3      36 ..     314     346 ..     313     348 .. 0.82
   2 !   26.6   0.7   1.1e-09   6.6e-06       1      38 []     349     386 ..     349     386 .. 0.93
   3 !   10.4   0.0   0.00014      0.85       1      25 [.     387     409 ..     387     412 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00012
        Sel1   3 AmyrLGmfylylnGl.gvpkDpekAiewyekAAeq 36 
                 +++ ++   +y++G+ g   +  +A+++y++A ++
  EPX74069.1 314 SAFFVA--DAYFYGTyGAHENTLRALQYYHLATDK 346
                 789999..788****554449***********987 PP

  == domain 2  score: 26.6 bits;  conditional E-value: 1.1e-09
        Sel1   1 aeAmyrLGmfylylnGl.g.vpkDpekAiewyekAAeqGd 38 
                 ++Am +L+   lyl+Gl g + ++ ++A+e+ ++AA++G+
  EPX74069.1 349 PDAMLALC--KLYLKGLpGhIQANSRRAFEYAHRAAMLGY 386
                 689*****..999****997888***************96 PP

  == domain 3  score: 10.4 bits;  conditional E-value: 0.00014
        Sel1   1 aeAmyrLGmfylylnGlgvpkDpek 25 
                 a A+y LG   +y++G g +kD  k
  EPX74069.1 387 APACYVLG--KFYETGIGCEKDLAK 409
                 579*****..666*********766 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0    0.0023        14      24      49 ..     241     266 ..     238     272 .. 0.86
   2 ?    6.0   0.2    0.0028        17       7      37 ..     330     361 ..     327     362 .. 0.78

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0023
      TPR_19  24 naearllLAeallalgqldeAealLd 49 
                 n + + +LA+al +   +++A+++L+
  EPX74069.1 241 NMDSLVDLAIALKKERKIEDAIEILE 266
                 5567889*****************97 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.0028
      TPR_19   7 yaeAlalleqa.lqedpknaearllLAealla 37 
                 +++ l++l++  l+ d  n++a l+L++++l+
  EPX74069.1 330 HENTLRALQYYhLATDKSNPDAMLALCKLYLK 361
                 556666666655678999************97 PP

>> Herpes_UL25  Herpesvirus UL25 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.2   1.5e-05     0.089      67     153 ..     166     253 ..     159     256 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 1.5e-05
                  XXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXX--EE................E-SSTTS--EEESS-HH CS
  Herpes_UL25  67 alaeeierrlkevEellekiael.eaaaaaeeaaaarpplspssaspltavasaeevgkgkesrddeiagevaIvknDpvlrvdtdfr 153
                  + ++ i++ l+++++l++ ++e+ ++  +++ ++     + ++++ p+  +  +++++ +ke+ + +  g+v I   D+++ ++  ++
   EPX74069.1 166 NKSHGIRKHLSRAKQLVKDVCESvKHIGSDNDSDYLATVCFDNKNTPKAVIDVNHDTEDHKEDTHTDTYGPVDINNMDSLVDLAIALK 253
                  67899******************8777777777777689****************************************998876665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (440 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       724  (0.0403815); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 3003.05
//
Query:       EPX74070.1  [L=359]
Description: DNAJ protein Caj1/Djp1-type [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-64  216.9   3.7      2e-64  216.9   3.7    1.8  2  DnaJ-X    X-domain of DnaJ-containing
    6.9e-25   87.0   1.3    6.9e-25   87.0   1.3    2.0  2  DnaJ      DnaJ domain
  ------ inclusion threshold ------
       0.12   13.1   0.2         42    5.1   0.0    3.5  3  TPR_6     Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> DnaJ-X  X-domain of DnaJ-containing
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   1.0       0.2   1.2e+03     102     134 ..     113     145 ..      97     151 .. 0.44
   2 !  216.9   3.7   3.3e-68     2e-64       2     210 ..     151     350 ..     150     351 .. 0.97

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.2
      DnaJ-X 102 daqstmeelakeqekk.keeekeeeeeteeelae 134
                 ++ ++mee ++++ k  ++ ++++++ +eee ++
  EPX74070.1 113 ELCKSMEE-SSSEYKAiEDVDESKKKLQEEESRQ 145
                 44555666.3333333122222222222333222 PP

  == domain 2  score: 216.9 bits;  conditional E-value: 3.3e-68
      DnaJ-X   2 eereeeLakkLrekLspyveadkke.etesFkkkleeeaesLkmesFGleilhtIGkiYknkAksflkskqkflglgglfssvkekgrvvkdtfktvss 99 
                 +er+++L  +L++kLs+++e+d++e +t++F++k++ eae Lk+esFG e+l++IG++Y ++A++fl+s q+f+g++gl+ss+++kg  +kdt++tv s
  EPX74070.1 151 QERIDNLCHNLVDKLSIWTETDMSEsVTNAFREKMRLEAEILKEESFGEELLNAIGSTYLQRARIFLES-QSFFGIKGLWSSLRAKGSLLKDTWSTVVS 248
                 69*********************999*******************************************.***************************** PP

      DnaJ-X 100 aldaqstmeelakeqekkkeeekeeeeeteeelaemekkllgkvLaaawkgskfeIestlrevcdkvLkDksvdketrlkRAeaLkilGeifqkakrte 198
                 a+++q+ +e lak++e++       +++t+e+++e  ++l+gkvL+a wkg++fe+++++r+v dk+L Dk++++e++++RA+aL ++Ge+f +++++ 
  EPX74070.1 249 AVEVQTKAEALAKAEEEG-------SNWTKEKREEAARELTGKVLSATWKGTRFEVQNVIRNVSDKILFDKNIPQEKLVQRAHALSMVGEVFLSVAPKR 340
                 ****************99.......***********************************************************************998 PP

      DnaJ-X 199 keeeearvfeel 210
                 +++++   feel
  EPX74070.1 341 ERADN--YFEEL 350
                 88533..57776 PP

>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.0   1.3   1.2e-28   6.9e-25       1      63 []       9      72 ..       9      72 .. 0.99
   2 ?   -3.1   0.2       1.6   9.3e+03      42      60 ..     127     145 ..     118     146 .. 0.65

  Alignments for each domain:
  == domain 1  score: 87.0 bits;  conditional E-value: 1.2e-28
                HHHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHH.HHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ  1 dyYeiLgvskdasedeIkkaYrklalkyHPDknpkdp.eaeekFkeineAyevLsdpekRkqYD 63
                +yYeiL+v+ da+ d+Ikk+Yr+la+++HPDknp++p ea+e+F+++ eAy+vLsdp+ RkqYD
  EPX74070.1  9 EYYEILKVPVDADFDTIKKSYRRLAIRLHPDKNPDNPeEARENFQRLGEAYQVLSDPQLRKQYD 72
                59*************************************************************9 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 1.6
                 HHHHHHHHHHHHTSHHHHH CS
        DnaJ  42 kFkeineAyevLsdpekRk 60 
                 + + + e  + L+++e+R+
  EPX74070.1 127 AIEDVDESKKKLQEEESRQ 145
                 4556667777788888876 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0     0.007        42       9      30 ..      28      59 ..      21      60 .. 0.80
   2 ?   -2.4   0.0       1.6   9.8e+03      13      25 ..     266     284 ..     258     287 .. 0.55
   3 ?    3.9   0.0     0.017     1e+02       5      29 ..     328     353 ..     324     357 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.007
                HHHHH..........HHHHHHHHHHHHHHHH- CS
       TPR_6  9 syrkl..........gdtdkAlealerlikeY 30
                syr+l          +++++A+e ++rl + Y
  EPX74070.1 28 SYRRLairlhpdknpDNPEEARENFQRLGEAY 59
                5666446667777767999*********8877 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.6
                 H......HHHHHHHHHHHH CS
       TPR_6  13 l......gdtdkAlealer 25 
                 +      ++ ++A+e+  +
  EPX74070.1 266 GsnwtkeKREEAARELTGK 284
                 4444444566777776555 PP

  == domain 3  score: 3.9 bits;  conditional E-value: 0.017
                 HHHHHHHH.HHHHHHHHHHHHHHHHH CS
       TPR_6   5 klalsyrk.lgdtdkAlealerlike 29 
                 + ++ +++ + + ++A  ++e+l+++
  EPX74070.1 328 MVGEVFLSvAPKRERADNYFEELLNQ 353
                 66778888788999*********997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (359 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1290  (0.0719505); expected 358.6 (0.02)
Passed bias filter:                      515  (0.0287244); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 2446.30
//
Query:       EPX74071.1  [L=379]
Description: methionine aminopeptidase Fma1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.9e-48  162.9   0.0    9.6e-48  162.6   0.0    1.1  1  Peptidase_M24  Metallopeptidase family M24
    8.3e-17   61.2   9.9    1.7e-16   60.2   9.9    1.6  1  zf-C6H2        zf-MYND-like zinc finger, mRNA-binding
    0.00029   20.8   5.6    0.00078   19.5   5.6    1.8  1  zf-MYND        MYND finger
  ------ inclusion threshold ------
      0.024   15.2   0.1         15    6.2   0.0    3.1  3  ATP-cone       ATP cone domain


Domain annotation for each model (and alignments):
>> Peptidase_M24  Metallopeptidase family M24
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  162.6   0.0   2.1e-51   9.6e-48       1     209 []     126     360 ..     126     360 .. 0.88

  Alignments for each domain:
  == domain 1  score: 162.6 bits;  conditional E-value: 2.1e-51
                    HHHHHHHHHHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHHHTT....TCEESSSSEEEEGGGGGSTTTBCSSSB--TTEEEEEEEEEEETTEEEEE CS
  Peptidase_M24   1 elirkaariasaaleavleaikpgvterelaaeieattlkrhg....arglafppivasgenaavlhytpndrvlkegdlvlidagaeydgyasDi 92 
                    e++r ++r+ +++l+ +++ai+pgvt++e++++++++t++r+      +++afp++v++++n+ ++h++p++r+l++gd++++d+ + ++g+++D 
     EPX74071.1 126 EQMRIVCRLGREVLDTAAAAIRPGVTTDEIDRIVHEATIERECypstLNYYAFPKSVCTSINEIICHGIPDQRPLQDGDIINLDISIYHNGFHADL 221
                    68*********************************997777658999************************************************* PP

                    EEEEECS...SGSHHHHHHHHHHHHHHHHHHHC-STTSBHHHHHHHHHHHHHHT...TBCCGBSSCSEEEESSSSSEEEEEESS..STTCSSB--T CS
  Peptidase_M24  93 trTvlvG...kftpeqrelyeavleaqeaaikavkpGvtlseidaaarevlesa...glakffphglGHgvGlevhdegpsvsr..esndgrklee 180
                      T++vG   k +pe   l+e ++ a+++ai+a+kpGv ++e +++++++++s    +l ++++ ++GHgv + +h   p++++  +++     ++
     EPX74071.1 222 NETYYVGdkaKSNPELVSLVENTRIALDKAIEAIKPGVMFQEFGNIIEKHAKSVtdvNL-SVVRTYCGHGVNQLFHCA-PTIPHyaRNKAPGIARP 315
                    *******88888889999**********************************9555678.999*************98.99887665668999*** PP

                    TBEEEEEEEEE.EET........TT.......E.EEEEBEEEEEES CS
  Peptidase_M24 181 GmvftiEpgiy.fap........ge.......g.gvriedtvlvte 209
                    Gm+ftiEp++    p        ++       + ++++e+t+lvte
     EPX74071.1 316 GMTFTIEPMLTlG-ParditwpdDWtsstasgKcSAQFEHTLLVTE 360
                    ********76630.23333333444666666645***********7 PP

>> zf-C6H2  zf-MYND-like zinc finger, mRNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.2   9.9   3.8e-20   1.7e-16       1      45 [.      10      53 ..      10      55 .. 0.97

  Alignments for each domain:
  == domain 1  score: 60.2 bits;  conditional E-value: 3.8e-20
     zf-C6H2  1 CasseCgkeassLqCptClklgikesfFCsqeCFkknwkkHkalH 45
                Ca+ +C++ a++LqCp+Cl  +++ sfFC+q+CFk++w+ Hk+lH
  EPX74071.1 10 CAGIDCHNFANKLQCPKCLANNTS-SFFCGQDCFKNSWSIHKQLH 53
                9********************977.******************** PP

>> zf-MYND  MYND finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   5.6   1.7e-07   0.00078       4      36 ..      15      51 ..      10      53 .. 0.88

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 1.7e-07
                T--.B-SC.E-TTT....S-SEESSHHHHHHCHHHHCC CS
     zf-MYND  4 Cgkaealk.kCagC....ksvfYCskeCqradwksHkt 36
                C++ +a k +C++C     s f+C+++C ++ w+ Hk+
  EPX74071.1 15 CHN-FANKlQCPKClannTSSFFCGQDCFKNSWSIHKQ 51
                999.99999*****7766688****************8 PP

>> ATP-cone  ATP cone domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0      0.02        89       3      20 ..      59      76 ..      58      83 .. 0.85
   2 ?    6.2   0.0    0.0034        15      39      74 ..     137     173 ..     117     181 .. 0.76
   3 ?    1.0   0.0      0.15   6.7e+02      42      77 ..     249     286 ..     229     287 .. 0.75

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.02
                EE-TTS-EEE--HHHHHH CS
    ATP-cone  3 ViKRdGtvepfdvekIkr 20
                V+K dGt+ pf + k + 
  EPX74071.1 59 VKKEDGTYDPFPKFKYTG 76
                99*********9988765 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.0034
                 HHHHHHHHHHIIT-BHHHHHHHHHHHHH.HSS-HHHH CS
    ATP-cone  39 eveaevrkrlrdgisteeIqdlvektli.ehpdyava 74 
                 ev + +   +r g++t+eI+ +v ++ i ++ +++++
  EPX74071.1 137 EVLDTAAAAIRPGVTTDEIDRIVHEATIeRECYPSTL 173
                 666667778899***********99988655555554 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.15
                 HHHHHHHIIT-BHHHHHHHHHHHHH..HSS-HHHHHHH CS
    ATP-cone  42 aevrkrlrdgisteeIqdlvektli..ehpdyavaaay 77 
                 +++ + ++ g+ ++e ++++ek ++  +  + +v++ y
  EPX74071.1 249 DKAIEAIKPGVMFQEFGNIIEKHAKsvTDVNLSVVRTY 286
                 556667788999999999***99997777777888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (379 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       561  (0.0312901); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 2645.68
//
Query:       EPX74072.1  [L=667]
Description: Sad1-UNC-like carboxy terminal [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.6e-33  115.5   0.3    3.1e-33  114.6   0.3    1.5  1  Sad1_UNC     Sad1 / UNC-like C-terminal
  ------ inclusion threshold ------
      0.072   12.9   0.1       0.16   11.8   0.1    1.6  1  OST-HTH      OST-HTH/LOTUS domain
        0.1   13.1   0.8       0.31   11.5   0.5    2.0  1  Cep57_MT_bd  Centrosome microtubule-binding domain of Cep57
       0.12   12.4   1.0       0.37   10.8   1.0    1.8  1  Rad10        Binding domain of DNA repair protein Ercc1 (rad1


Domain annotation for each model (and alignments):
>> Sad1_UNC  Sad1 / UNC-like C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.6   0.3   6.8e-37   3.1e-33       2     131 ..     198     323 ..     197     324 .. 0.95

  Alignments for each domain:
  == domain 1  score: 114.6 bits;  conditional E-value: 6.8e-37
                 EEE-B-GGGGGSS-...-STT-SEEEESS-EEEEEEEEEEEEEEEEEEE---GGGSG-TTSB-EEEEEEESSTT---..-EEEEEEE--TTS-SEEEEE CS
    Sad1_UNC   2 nkeakapkvilqed...yspgeCwsfkgsrgfvvieLseeiiveavtlehveksvapisSapKdfevsgskrypekk..wvllgefsydedgknaqtFe 95 
                 n ea+ +++il+e+   y++++C s   ++ fv+ieL+e+i+v++v+++++e+    +sS ++++++s+s +yp+++  w++lg+f+ + + +++q+F+
  EPX74072.1 198 NVEAEGASSILTENkdkYMLNKC-S--ATKKFVIIELCEDIYVDTVQIANFEF----FSSIFRTVRISVSGKYPKQEssWMELGTFT-AMNLRTLQSFH 288
                 56889999*****99********.4..4445**********************....******************************.9********** PP

                 --TT----EEEEEEEE--BSS-SSEEEESEEEEEEE CS
    Sad1_UNC  96 leeskdilvkyvkleilsnyGneeytclyrlrVyGt 131
                 +e++  i++ky k+eils+yG+e+y++l+++ V+G+
  EPX74072.1 289 IENPL-IWAKYMKIEILSHYGSEFYCPLSLVHVFGK 323
                 ****8.*****************************8 PP

>> OST-HTH  OST-HTH/LOTUS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   3.6e-05      0.16       5      50 ..     468     516 ..     464     517 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.6e-05
                 HHHHHHHHHHHH...TTTT.SBEHHHHHHHHHHHHSST-STCCCTSSSHH CS
     OST-HTH   5 klkkeirelLrs...dpdg.wvslsrlgslykkkygksfdprkyGfskLs 50 
                  +++ i++lL s   + +   ++ls+l +++   ++++fd  +y ++ L+
  EPX74072.1 468 LFDEAIQKLLASfgkH-ETkQLNLSDLLNEIIVSHKEEFDQMRYQYQRLQ 516
                 6899**********54.5449*************************9885 PP

>> Cep57_MT_bd  Centrosome microtubule-binding domain of Cep57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.5   6.9e-05      0.31      10      42 ..     491     523 ..     482     545 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 6.9e-05
  Cep57_MT_bd  10 keaLaevlkeLedEfehlklelqelaaqynald 42 
                   + L e++   ++Ef++++ ++q+l++ +  l+
   EPX74072.1 491 SDLLNEIIVSHKEEFDQMRYQYQRLQSSFYILQ 523
                  567999********************9876655 PP

>> Rad10  Binding domain of DNA repair protein Ercc1 (rad10/Swi10)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   1.0   8.2e-05      0.37      12      73 ..     492     557 ..     484     567 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 8.2e-05
       Rad10  12 plLkslk.nvpweykdivpDyvi.gsttcvlflslkyhklhpeYieerlkklk..kkyklrvlLvl 73 
                  lL+++  + + e++++ + y+  +s++++l   l   + ++e++++r+++l+  +++++r+l+++
  EPX74072.1 492 DLLNEIIvSHKEEFDQMRYQYQRlQSSFYILQARLELASAENEFVQRRIQSLSddSSFQKRLLVLQ 557
                 5777754266677899999999659999*************************8666787777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (667 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1661  (0.0926432); expected 358.6 (0.02)
Passed bias filter:                      612  (0.0341346); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.68u 0.27s 00:00:00.95 Elapsed: 00:00:00.43
# Mc/sec: 4672.38
//
Query:       EPX74073.1  [L=1089]
Description: DNA repair nuclease Rad13 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.5e-38  129.1   0.0    2.3e-37  127.5   0.0    1.9  1  XPG_N     XPG N-terminal domain
    3.8e-24   84.9   3.4    4.8e-24   84.5   0.0    3.1  3  XPG_I     XPG I-region


Domain annotation for each model (and alignments):
>> XPG_N  XPG N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.5   0.0   2.6e-41   2.3e-37       1      99 [.       1      96 [.       1      98 [. 0.99

  Alignments for each domain:
  == domain 1  score: 127.5 bits;  conditional E-value: 2.6e-41
                X--TTHHHHHHHH-GEEEEEGGGGTTEEEEEEHHHHHHHHHHHSE.ETTEE-BS-HHHHHHHHHHHHHHHTTEEEEEEE--S--GGGHHHHHHHHHHHH CS
       XPG_N  1 MGikgLlkllkevaairsvsiealegkklaiDaslwlyrfliavreqlgnalentshlmglfsrllrlldfgikPifVFdgkapdlkkeelekrserrq 99
                MG++gL+++l++v+  r+v++e+l++k+la+Das+w+y+fl+avr+++gn+l++ sh++g+f+r+++ll+fgikP+fVFdg+ap lk+++l+kr++rr 
  EPX74073.1  1 MGVSGLWNVLEPVK--RPVKLETLNDKRLAVDASIWIYQFLKAVRDKEGNQLKS-SHIVGFFRRICKLLFFGIKPVFVFDGGAPVLKRQTLRKRQARRV 96
                **************..**************************************.******************************************97 PP

>> XPG_I  XPG I-region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.2   0.5         2   1.8e+04      59      82 ..     528     551 ..     520     560 .. 0.50
   2 !   84.5   0.0   5.4e-28   4.8e-24       1      94 []     746     830 ..     746     830 .. 0.96
   3 ?   -2.1   0.0      0.59   5.3e+03      39      66 ..    1008    1031 ..    1006    1055 .. 0.53

  Alignments for each domain:
  == domain 1  score: -4.2 bits;  conditional E-value: 2
                 .EEECEEEEEEHHHHHHHHT--HH CS
       XPG_I  59 ekekkkvevidlekvlkelgltre 82 
                 ++ekk++e    e+v++e+  t+e
  EPX74073.1 528 DSEKKNMENKPFEDVNNETVHTKE 551
                 334445555555555555444444 PP

  == domain 2  score: 84.5 bits;  conditional E-value: 5.4e-28
                 HHHT--EEE-SS-HHHHHHHHHHTTSSSEEE-SSSHHHHTT-SEEEESTT.ECECTT..EEECEEEEEEHHHHHHHHT--HHHHHHHHHHHCET CS
       XPG_I   1 klmgipyvvApgEAEAqcayLqkkglvdaviseDsDlllFGapkvlrnlskkkskkkkekekkkvevidlekvlkelgltreqlidlaillgcD 94 
                 +l+g+py+vAp EAEAqca L + +lvd+++++DsD++lFG+++++rn++  +++k        ve + ++++++e+++++ +li la llg+D
  EPX74073.1 746 RLFGLPYIVAPQEAEAQCAKLLELKLVDGIVTDDSDVFLFGGTRIYRNMF--NQNK-------FVELYLMDDMKREFNVDQTKLIRLAHLLGSD 830
                 689**********************************************9..5554.......5****************************99 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 0.59
                  HTT-SEEEESTT.ECECTT..EEECEEE CS
       XPG_I   39 lFGapkvlrnlskkkskkkkekekkkve 66  
                   FG++ v+ n  +++++++ ++     e
  EPX74073.1 1008 SFGTTGVVANEENETKQAS-NS---LKE 1031
                  6999999999762222222.11...112 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1089 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1594  (0.0889062); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.79u 0.29s 00:00:01.08 Elapsed: 00:00:00.46
# Mc/sec: 7048.22
//
Query:       EPX74074.1  [L=146]
Description: DUF757 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      2e-21   76.4   0.9    2.2e-19   69.7   0.9    2.1  1  Polysacc_synt_4  Polysaccharide biosynthesis


Domain annotation for each model (and alignments):
>> Polysacc_synt_4  Polysaccharide biosynthesis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.7   0.9   1.2e-23   2.2e-19       1     187 [.      16     141 ..      16     145 .. 0.95

  Alignments for each domain:
  == domain 1  score: 69.7 bits;  conditional E-value: 1.2e-23
  Polysacc_synt_4   1 aEislavkvlerrevpcnlLvFGlghesllwkslnkggrlvlleeddeivekvkkefpeleayevkYktkvsdadeLlsaakkeaecrpvqnll 94 
                      +E+++avk++e+++++++lL             + kg++l+l++ ddei+e +kk fpe+e  +   +++  +++e++s ++k           
       EPX74074.1  16 IEMQFAVKAVEQAQIYWSLL------------GMRKGSELRLTKYDDEIFEDLKKTFPEFENPK---TVEYVNEEEMKSPKGK----------- 83 
                      69******************............566899**********************9888...9***************........... PP

  Polysacc_synt_4  95 asdckLalrdLPnevyeekWDvilvDaprgfaeeapgrmediytagvlaRarkseeyseetdvfvhdvqrkvekafseeFlceeiavnregl.l 187
                                       + W        r+f++ ++++++d y++g+l+R r+++ey+++t++fv+++q          F++ eia+n+ gl  
       EPX74074.1  84 -----------------AAW--------RPFMMRYQKKIDD-YNFGTLLRVRNTDEYEQDTTIFVPRMQ----------FFAFEIARNKYGLnD 141
                      .................9**........*************.***************************..........***********9852 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       545  (0.0303977); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.27s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 1093.80
//
Query:       EPX74075.1  [L=557]
Description: vacuolar membrane amino acid uptake transporter Fnx2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.1e-44  151.3  42.2    3.1e-44  151.3  42.2    2.3  2  MFS_1        Major Facilitator Superfamily
    1.2e-19   70.6  27.3    9.9e-14   51.0  11.2    2.3  2  Sugar_tr     Sugar (and other) transporter
  ------ inclusion threshold ------
      0.013   15.4   0.2        5.9    6.8   0.0    2.4  2  Cas_APE2256  CRISPR-associated protein (Cas_APE2256)


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.3  42.2   5.3e-48   3.1e-44       1     352 [.      75     474 ..      75     475 .. 0.87
   2 ?   -3.2   1.3      0.51   3.1e+03     149     172 ..     530     551 ..     521     555 .. 0.53

  Alignments for each domain:
  == domain 1  score: 151.3 bits;  conditional E-value: 5.3e-48
       MFS_1   1 lllaaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslw.lllvlrvlqGlg 98 
                 lll+++lsal+ +i++++++  ++ ++g    ei++++t y++++ ++++++Gr+ + +Gr+++ll+++ +f+lg++++ + s++   l+++r+++G+g
  EPX74075.1  75 LLLGIILSALDNTIVASTYT-KIGAEFG-KFNEISWAATSYMIACTAFQPLFGRFCEIYGRKSTLLFAYSVFGLGCFFCGL-SQSLyQLIIARAIAGIG 170
                 6899****************.*******.**********************************************777777.55555************ PP

       MFS_1  99 agalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpeepperkrkspkeee......... 188
                 +g++++++ +l++d++p ++rg + g+++++f++G+ lg ++gg++a+++ Wr+ f+i  +++++af+ + ++l  ++++r+ +++k  +         
  EPX74075.1 171 GGGMNSTVTILMSDLVPLKQRGTYQGIINVFFAVGSSLGGPVGGFFADQFTWRLGFFIQVPLLVVAFLSVTFFLNLPHHSRESFTEKFSRidwlgllll 269
                 ********************************************************************9899999999999999999998********* PP

       MFS_1 189 ...........................................kgtgpaplvpawkallkdpvlwillialllfffgfsg...lltllplylqevlgls 241
                                                              + + pl+p ++ l  +     +l a l++ff   +     + lp+y q v++ s
  EPX74075.1 270 tsgvfnmtfaltlggntrpwsdplvamlilgsfisyssflyveTYVSEEPLAP-ITVLTDRT----CLSAYLCNFFQSLSqlsWIYSLPVYYQAVMNQS 363
                 ************88888888888888888887777777777777777777777.77777777....9999999964444489999999999******** PP

       MFS_1 242 glllaglllallalvgail.allagrlsdrlgr.rrrlllallllllaalglallavtssavllllvlvliGfglgfvfpsllalasdlappeeagtas 338
                     +g +  ++++vg  + +ll+g +++ +g+ +r+++++++l++++al+++  ++ +  + ++l  +l G+g g+  ++ l+++ +  p   +++a+
  EPX74075.1 364 -TEKSG-VWLIPMIVGSSIgSLLGGIVINLTGNyKRITVFSYFLAFVGALSMLRYGLNTQVWEYILYPFLGGLGTGISITTTLVAIIHASPSALQASAI 460
                 .45555.455555555555277777777999997888888899999999999999999555555556666666************************** PP

       MFS_1 339 glfntagslggalg 352
                 +   +++s g++lg
  EPX74075.1 461 ATSYLFRSNGCVLG 474
                 **999999999987 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 0.51
       MFS_1 149 gWravfyilaivsllafvlfllll 172
                 + +++f++  + +++a+++   l+
  EPX74075.1 530 SVHYTFLFTSVSFFVALLI--SLF 551
                 4455555555555555443..333 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.0  11.2   1.7e-17   9.9e-14      47     190 ..     105     242 ..      64     252 .. 0.92
   2 !   25.3   8.1   1.1e-09   6.5e-06      37     161 ..     355     481 ..     296     494 .. 0.81

  Alignments for each domain:
  == domain 1  score: 51.0 bits;  conditional E-value: 1.7e-17
                 HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHH CS
    Sugar_tr  47 lsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyql 145
                  +++ + ++++ +++ + ++g + +++GRk++ll+a  +f  g + +++++   s+++li++R ++Gig G+ + +v++++s + p k Rg+  ++ ++
  EPX74075.1 105 EISWAATSYMIACTAFQPLFGRFCEIYGRKSTLLFAYSVFGLGCFFCGLSQ---SLYQLIIARAIAGIGGGGMNSTVTILMSDLVPLKQRGTYQGIINV 200
                 4789999********************************************...********************************************* PP

                 HHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHHHHHHHHHHGGG CS
    Sugar_tr 146 aitfGilvaaifglglnktsnadgwrillglqlvpallllilllf 190
                 + ++G  ++  +g ++++      wr+ +++q+ + ++ ++ ++f
  EPX74075.1 201 FFAVGSSLGGPVGGFFADQFT---WRLGFFIQVPLLVVAFLSVTF 242
                 ****************99999...********9988877777665 PP

  == domain 2  score: 25.3 bits;  conditional E-value: 1.1e-09
                 SHHHHHH....HHHHHHHTHHHHHHHHHHHHHHHHHHTTH.HHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-S CS
    Sugar_tr  37 sksskee.ssvlsglivsiflvGaiiGslfagllgdrfGR.kkslliaavlfvigavlqaaakgknsvevlivgRvlvGigvGlasvlvPmyisEiApk 133
                 ++++  + s+  sg+ +  ++vG+ iGsl++g++++  G+ k + +++ +l+++ga+ +     +++v+ +i+  +l G+g G+  +++ + i   +p 
  EPX74075.1 355 YYQAVMNqSTEKSGVWLIPMIVGSSIGSLLGGIVINLTGNyKRITVFSYFLAFVGALSMLRYGLNTQVWEYILYPFLGGLGTGISITTTLVAIIHASPS 453
                 333222246778999999*********************6266667799***********99999********************************** PP

                 CCHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Sugar_tr 134 klRgalvslyqlaitfGilvaaifglgl 161
                 +l    +    l+ + G +++  + + +
  EPX74075.1 454 ALQASAIATSYLFRSNGCVLGVSISTSI 481
                 9999999999999999998887777666 PP

>> Cas_APE2256  CRISPR-associated protein (Cas_APE2256)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.1    0.0016       9.5      94     119 ..     387     412 ..     384     417 .. 0.89
   2 ?    6.8   0.0   0.00099       5.9      55      85 ..     481     510 ..     446     526 .. 0.72

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0016
  Cas_APE2256  94 vlinaTgGfKpeiavltlvalllade 119
                  ++in+Tg +K  +++ + +a ++a +
   EPX74075.1 387 IVINLTGNYKRITVFSYFLAFVGALS 412
                  68******************998876 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.00099
  Cas_APE2256  55 vveieklsdlgreeFreglrnLveklarevk 85 
                  +v + +l+ + r+ F  gl++L+++l+++++
   EPX74075.1 481 IV-QTSLKLQLRKYFDYGLDELIRQLQKDIS 510
                  22.24577778999**************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (557 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       642  (0.0358079); expected 358.6 (0.02)
Passed bias filter:                      296  (0.0165096); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 4004.20
//
Query:       EPX74076.1  [L=566]
Description: mitofilin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.1e-43  149.2  29.7      9e-35  120.6  29.1    2.1  2  Mitofilin        Mitochondrial inner membrane protein
    0.00058   20.2   2.6    0.00058   20.2   2.6    3.1  2  YlqD             YlqD protein
  ------ inclusion threshold ------
       0.16   11.2   1.5       0.41    9.9   0.3    2.0  2  PorA             Porin PorA
        2.8    8.6  20.5      0.056   14.1   3.5    3.1  2  Adaptin_binding  Alpha and gamma adaptin binding protein p34


Domain annotation for each model (and alignments):
>> Mitofilin  Mitochondrial inner membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   0.1   2.3e-10     1e-06       8     135 ..      73     199 ..      66     244 .. 0.53
   2 !  120.6  29.1     2e-38     9e-35     277     622 ..     221     554 ..     209     555 .. 0.91

  Alignments for each domain:
  == domain 1  score: 27.9 bits;  conditional E-value: 2.3e-10
   Mitofilin   8 lvalvlivgvgvGGvvlyakkddeFrdfleksvPyseevvdylleedpplae...............klkeisklqvsavsevtkeskepkeekkkeks 91 
                 ++ l+ +++ g++G+++y+  d++F d + k+ P++++++ +++ +    +                +++           ++++ s+++ e++k+++ 
  EPX74076.1  73 FLLLAFLGLTGYAGGIWYSFEDPKFYDAFAKYAPFGDRLLPAIEHSWVGYKFfggnkilirdmpkmmQPN-----------ASQGVSSDIVEQAKRKEL 160
                 6677889999******************************999998876655998766655544333222...........223333333333332222 PP

   Mitofilin  92 ekqssassevaeeeaeatkkaaeakaqqpkseqekekaleevlk 135
                 +    +  + +e+++++ +  + +k   pk e++++   +e +k
  EPX74076.1 161 A--IPTELKHSEAPKQESNNNSTSK---PKTESKASDDVKENAK 199
                 1..1111111222222222222222...2222222222221111 PP

  == domain 2  score: 120.6 bits;  conditional E-value: 2e-38
   Mitofilin 277 nlkednkklskddlnsliahAkteidqlskelaelkkeeekkieralekqkeelekqeealsarleeerakeerqlrlelereleeireeyeekLrteL 375
                 +++++ + + +++l+   +++++ ++ +++   + + +  ++ +++l +++  l+   e+ ++++e  ++++ +q+r+ le+e + ++   ++ L++eL
  EPX74076.1 221 VINQTLQRAHEEELKDQTLKFEASLNEANQ--LRAQLSKLQDEQKELYEKR--LNSKLEEWNSKIEGLLTERDQQWRELLEQEKQIQQNIHDSRLHEEL 315
                 556666666677777777777777777766..5666666677777777777..44666889999999999999************************** PP

   Mitofilin 376 erqaeaheehLkdvlveqeieLkrefqqeikekveeEragrllkLaellaklkglekaleshaeaedenrkaqqLwlAveaLrstlksasadkrtrPlk 474
                  r++++ e +Lk++l+eq+ie++r ++q +k +ve+Er++rl kL+el ++ ++l +++ +         k    + A+e +++ ++  +     + l+
  EPX74076.1 316 VRATAVYEAKLKNELTEQAIEMERMHLQAVKAQVEQERGSRLGKLSELRSSFEELQNLARGVIFDNGRMTKFIEVQKALEKVEKDVDMRDS----KSLE 410
                 ***********************************************************99888888888888889999999999999986....89** PP

   Mitofilin 475 delkalkelasdDevvkavlaslpeealqrGvyseaaLrerFrkVakevRkvalvdpegagllshalSyllSkllfkpkqgeldvagdDvesiLaRAey 573
                 + l+ lk+ +++D++ + +   ++ + ++ ++ ++++L+ +F+ + ke+ k+  +   ++g l h+ S++lS l +   +   +++ ++v+ +L+ A+ 
  EPX74076.1 411 KNLQDLKDATQEDQLSGLAYNVIDSTLQSGPILTKKELQMKFDALSKEIYKTCFL-TVDSGFLGHMKSMVLSQLPASLFK---SPEIQSVQNVLNEARS 505
                 *******************************************************.99****************999888...7999************ PP

   Mitofilin 574 yLeegdLdkAaremnsLkGwskklasDWLkeaRkvlevqqalellqaea 622
                  L   d d+ ++ +  L + s+ l++DW++  R++le+qqa++++++ a
  EPX74076.1 506 NLMADDYDSVVKSLLTLSQLSRALSKDWIECCRRKLELQQAINIIKSSA 554
                 ********************************************98866 PP

>> YlqD  YlqD protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9  14.4      0.06   2.7e+02      24      97 ..     233     313 ..     215     321 .. 0.66
   2 !   20.2   2.6   1.3e-07   0.00058      45     108 ..     325     392 ..     310     407 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.06
        YlqD  24 qlqaqieqld...kelqqLefqakrlikeikkqsaq....qieeiqeqvekekserlekkkqllqqleqvqkLelgsevkq 97 
                 +l++q  +++   +e +qL+ q+ +l +e+k+  ++    + ee ++++e    er ++ ++ll+q +q+q+   +s +++
  EPX74076.1 233 ELKDQTLKFEaslNEANQLRAQLSKLQDEQKELYEKrlnsKLEEWNSKIEGLLTERDQQWRELLEQEKQIQQNIHDSRLHE 313
                 444443333311157778888888888888776665777777888888888888888888888888888887655555555 PP

  == domain 2  score: 20.2 bits;  conditional E-value: 1.3e-07
        YlqD  45 rlikeikkqsaq....qieeiqeqvekekserlekkkqllqqleqvqkLelgsevkqgqveslvevkv 108
                 +l +e+ +q ++    + +++++qve+e+  rl k ++l++  e++q+L+ g   ++g++ +++ev++
  EPX74076.1 325 KLKNELTEQAIEmermHLQAVKAQVEQERGSRLGKLSELRSSFEELQNLARGVIFDNGRMTKFIEVQK 392
                 444555555555666799************************************************96 PP

>> PorA  Porin PorA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.3     9e-05      0.41     215     276 ..     205     265 ..     163     271 .. 0.86
   2 ?   -0.4   0.0      0.12   5.6e+02     187     233 ..     318     364 ..     287     403 .. 0.68

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 9e-05
        PorA 215 tlwVepeTGviVkgeekirqylardgdeaeeaavtlldadlawdeetv.eaqveqakegrdkl 276
                 +l  ++eTG+ V ++  i+q+l+r+++e+   + + l+++++++e+++ +aq+++ ++++++l
  EPX74076.1 205 DLGLDQETGISVTAAPVINQTLQRAHEEE--LKDQTLKFEASLNEANQlRAQLSKLQDEQKEL 265
                 5667******************8888666..67999********9977478999999997765 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.12
        PorA 187 ptklaaklrltvPaslw...........vtmtryysatrtlwVepeTGviVkgeekir 233
                 +t ++           +           ++m+r++   ++  Ve+e G  +    ++r
  EPX74076.1 318 ATAVY-----------EaklknelteqaIEMERMHLQAVKAQVEQERGSRLGKLSELR 364
                 23333...........022223333455888888888888888888887666555555 PP

>> Adaptin_binding  Alpha and gamma adaptin binding protein p34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   3.5   1.2e-05     0.056      39     114 ..     163     266 ..     109     270 .. 0.64
   2 ?   -1.1   9.0      0.63   2.8e+03      30     102 ..     304     422 ..     276     525 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 1.2e-05
  Adaptin_binding  39 eadeaqlekeeeeqdpsqpastepdksaaesesadaef...............................lfggdeaarle......dlesllsk 95 
                       ++++++e+++ e++ + +   +++k +++  ++ +e+                                +++      e      ++e  l++
       EPX74076.1 163 PTELKHSEAPKQESNNNST---SKPKTESKASDDVKENaktiaisdlgldqetgisvtaapvinqtlqrAHEE------ElkdqtlKFEASLNE 247
                      3334444444444444443...333333333333333367899999999999999999999986665544444......2444555******** PP

  Adaptin_binding  96 lqqakdnvrnlpdeeRkke 114
                       +q++ + ++l de+++ +
       EPX74076.1 248 ANQLRAQLSKLQDEQKELY 266
                      ***************9865 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.63
  Adaptin_binding  30 snrnaslet.........eadeaqlekeeeeqdpsqpastepdksaaesesadaef...................................... 76 
                      +n  +s  +         ++ ea+l++e++eq+++++    +  +a+ +++    +                                      
       EPX74076.1 304 QNIHDS--RlheelvratAVYEAKLKNELTEQAIEMERMHLQAVKAQVEQERGS-Rlgklselrssfeelqnlargvifdngrmtkfievqkal 394
                      222222..1235677777888888888888888888876666555555554433.347888888888888888888888888888877777554 PP

  Adaptin_binding  77 ..lfggdeaarle.....dlesllsklqqakdn 102
                         +++      +     +le+ l+ l+ a ++
       EPX74076.1 395 ekVEKDV-----DmrdskSLEKNLQDLKDATQE 422
                      3333333.....233444777777777766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (566 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1979  (0.11038); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.70u 0.32s 00:00:01.02 Elapsed: 00:00:00.50
# Mc/sec: 3377.61
//
Query:       EPX74077.1  [L=494]
Description: Ric8 family guanine nucleotide exchange factor synembryn family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.5e-48  163.5   2.8      1e-47  163.2   2.8    1.1  1  Ric8      Guanine nucleotide exchange factor synembryn


Domain annotation for each model (and alignments):
>> Ric8  Guanine nucleotide exchange factor synembryn
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.2   2.8   5.8e-52     1e-47       4     458 ..      51     483 ..      14     484 .. 0.73

  Alignments for each domain:
  == domain 1  score: 163.2 bits;  conditional E-value: 5.8e-52
        Ric8   4 tLkilgRdpkgldplftkeaistLlklafdssstsaslekeseeevareAlrcLaNalllsekarqrlverlkggeekavellkkdksspadiefldsR 102
                  Lk l+R+ ++++++++    +  + +a+  ++          + +  e ++ +aN  ++ +   ++l +++    +  ++++   ++ + + + +++R
  EPX74077.1  51 RLKELSRKLENAKQIASVLDWNSYFYYASTCQD----------KVTSLEMIKLVANCFMQVPVLTKQLAHSDC--LKSFTQKVF--ERENLESQNVYLR 135
                 455555555555555555555554445433333..........344499*************99999777333..233333333..3458999999999 PP

        Ric8 103 llFL.lTaleseirkelkelveeesl.laealeqilkrkakevsssdeaasslskeesealselLKllFnltlhypksvldeeea.....eelseklar 194
                  lF+ l+++ +++      ++++ +  l++ le+i + k++         s  ++e+  +  e+L++lF l+     ++   + +      +++ +l+r
  EPX74077.1 136 FLFIfLSYQGADTC----INLNDLTFlLVKRLEAIWNFKLQ---------SVCDNENLSLYAEILRILFPLFRIGSIEEST-KLTyvsgkYQHVLTLFR 220
                 99962677745533....33344443255555555555555.........66788899999***********977733322.22244555344555666 PP

        Ric8 195 llppllrlllllpipspdpLkpplthlinaLlnlpleeskkeaa.........lfpssaegnnmdvvsrllelldkrlaaadekkdkdaeleekltpll 284
                 +lp l+++  +    +++    +  h ina+l   l++ ++++a         ++ s  + + ++ ++  + +l+++++ ++   +  a le+ l+p+l
  EPX74077.1 221 ALPILIKTWSKYAQDEDS---TIRWHSINAILECSLKNITSSQAceivglaikTLHSIVKLETVEQLEGHYLHLESAISLNT---S--ASLEKVLVPIL 311
                 666666666554333333...5779***********8776665555566544322222344455555555666666663322...2..349******** PP

        Ric8 285 llLtklaeaaeevRkylrerlLPplrDrskrlekgdtlrgrllRlmtsvstprlkdavaelLFvLckedasrlvkyvGYGnaAGfLankgllsaqpe.. 381
                 ++L  ++   e v++ l+ + LP++ Dr + l kg++l   llRl++ + ++++    ++ LF +c+ +a+ l+k+vGYG+a+G+L +      + +  
  EPX74077.1 312 CVLYSIMHI-ERVQEKLKFIFLPEECDRVTSLKKGKSLACLLLRLSMIPLLENISIWHGTILFRICDCNADLLTKEVGYGYASGILNRVKHSDSS-Nii 408
                 *****9998.99*************************************************************************9776555532.233 PP

        Ric8 382 .yssdsedsdteeykqakraiNPiTGqveeeee.enpleeMTeeEKErEAerLfvlfdrlektgviqvenPvekagedG 458
                       e++  + + ++ + i+PiTG++++  +  +  + MT eEKErEAerLf lf+rlek+g +qv+nP+++a+++G
  EPX74077.1 409 iP----ESTGNSLKPENFQFIDPITGEFKQRSKqPSSSSTMTMEEKEREAERLFILFQRLEKNGAMQVTNPIRQAIDSG 483
                 21....23444566778899*********9999755568**************************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (494 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       870  (0.0485247); expected 358.6 (0.02)
Passed bias filter:                      505  (0.0281667); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 3377.20
//
Query:       EPX74078.1  [L=1889]
Description: 1-phosphatidylinositol-3-phosphate 5-kinase Fab1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-42  145.9   2.3    8.4e-34  117.0   1.0    2.4  2  PIP5K          Phosphatidylinositol-4-phosphate 5-Kinase
    8.4e-28   97.2   0.0    1.3e-27   96.6   0.0    1.2  1  Cpn60_TCP1     TCP-1/cpn60 chaperonin family
    5.9e-15   55.2  12.5    5.9e-15   55.2  12.5    2.1  2  FYVE           FYVE zinc finger
  ------ inclusion threshold ------
      0.014   15.0   0.4      0.045   13.3   0.4    1.9  1  PI3K_P85_iSH2  Phosphatidylinositol 3-kinase regulatory subun
       0.03   14.5   0.3       0.13   12.4   0.3    2.2  1  Cys_rich_FGFR  Cysteine rich repeat
      0.051   13.7   7.0       0.15   12.2   6.3    2.2  2  Zf_RING        KIAA1045 RING finger
       0.12   12.5   0.1       0.34   11.0   0.1    1.7  1  T2SSG          Type II secretion system (T2SS), protein G


Domain annotation for each model (and alignments):
>> PIP5K  Phosphatidylinositol-4-phosphate 5-Kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.0   1.0   3.3e-37   8.4e-34       9     169 ..    1648    1816 ..    1641    1818 .. 0.88
   2 !   28.6   0.0     3e-10   7.6e-07     223     272 ..    1817    1868 ..    1813    1870 .. 0.92

  Alignments for each domain:
  == domain 1  score: 117.0 bits;  conditional E-value: 3.3e-37
                  ----SSS--EEEETTSSEEEEEE-HHHHHHHHHHHHHHHHHHTT-T....T--S--EEEEEEEE.E.....TTEEEEEEEEE-SS-TTS--SEEEEE CS
       PIP5K    9 sseGkSgsffylteDkkfiiKtitksevkflrkllpeYyehvkenp....nsLltrfyglhrvklk.....ggkkvrfvVmenlfptdkeiheryDL 96  
                  ss GkSgs+f  t D+++++K +++ e++ l+++ p+Y++++++       + lt+++g++ v ++     +  k  ++Vmenlf+ d++ ++ +DL
  EPX74078.1 1648 SSGGKSGSAFLKTFDERYVMKVVSRLESDSLLSFAPAYFDYMSKVVfhelPTTLTKIFGFYHVDIRnpstgKVCKLDIMVMENLFY-DRKPSRIFDL 1743
                  589***************************************954333359************9987765555566*********6.66669***** PP

                  -S--TT-S--HHHHTSSS-EEEHHHHHHHST...EEE-HHHHHHHHHHHHHHHHHHHHTTB-S-EEEEEEEB--- CS
       PIP5K   97 KGstvgReakkkeeekkektlkDlDliekkek..lklgkekreelleqlekDvefLeslnimDYSLLlGihnsek 169 
                  KGs  +R++++  + k++++l D +l+e   +  + ++++ ++ l + l +D+ fL++lnimDYSL++Gi ++++
  EPX74078.1 1744 KGSMRNRHVQS--TGKDNEVLLDENLVELIYEspIFVSEQLKSMLQSSLWNDTLFLSKLNIMDYSLVVGIDYEKR 1816
                  *********96..4566778******99865578************************************87764 PP

  == domain 2  score: 28.6 bits;  conditional E-value: 3e-10
                  EEEEEEE----B--------------..--------TTHHHHHHHHHHHHHH CS
       PIP5K  223 vyylgiIDiLqkynlkKklehalksl..kkdkksisavpPkeYaeRFlkfie 272 
                   +y+giID++ +y++ Kkle+++k      ++++ + v+Pk+Y+ RF k ++
  EPX74078.1 1817 ELYVGIIDFIRTYTWDKKLESWVKEKglVGRGPEPTIVTPKQYKIRFRKAMD 1868
                  589********************9888899999***************9986 PP

>> Cpn60_TCP1  TCP-1/cpn60 chaperonin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.6   0.0     5e-31   1.3e-27     158     365 ..     466     675 ..     447     683 .. 0.87

  Alignments for each domain:
  == domain 1  score: 96.6 bits;  conditional E-value: 5e-31
                 EECSCCC.EECCCCEECECTTSEEESEEEESS--SSTTSSCEEECEEEEEESS-BS--HHCCHHHCCCCSCCHHHHHHHHHHHHHHHHHHHHHHTTECE CS
  Cpn60_TCP1 158 keldlgr.ikvvkieggsledselveGlvldkgvlspdmpkklenakvllldvsLeiektetkttvvlsdaeeleklekaeekqleellekiiksgvnv 255
                  ++d+ + +k++ki gg+ +++  v+Gl++ k+ +s++m++++++++++ll++sL+++ +e       +    l++l++++e+++ +l+ +i+ ++ ++
  EPX74078.1 466 DDIDVRSyVKIKKIPGGQPNQTFYVPGLLFTKKASSKSMDRSVQKPRIALLSFSLDYDCNE-------QRILSLDSLMSQQEEYVYNLVSRICMLKPTL 557
                 567888889*************************************************773.......356678999********************** PP

                 EEESS-B-HHHHHHHHHCT-EEE-S--HHHHHHHHHHHT--EBSCGGGGG.CGC-EEEEEE..EECCETT.....CCEEEEECESSSSXEEEEEEESTC CS
  Cpn60_TCP1 256 vvcqkgiddlalhflakngilalrrvkkkdlerlakatGatavssledlt.peelGtakkv..eeekigs.....ekttiieevksgkiatillrgatd 346
                 v+++++i  +al++++++g++a+  +k++ + ++a+++ a ++ss+++l+ + +lGt++++  +   i +     +++ i+++++++  +t++lrg + 
  EPX74078.1 558 VFIKDDIPTIALKYFEEHGVVAICGIKETVMYDIARCCHADIISSIDKLSlRPHLGTCGQFqlCSYVIDEklgirKTFAILDHCSERLGCTVVLRGGSY 656
                 **************************************************5589****9874444444443333355556779**************** PP

                 CCHHHHHHHHHHHHHHHHH CS
  Cpn60_TCP1 347 tvldeieraiedAlnvvkn 365
                 ++l +++r +e ++ ++ +
  EPX74078.1 657 EELTKVKRIVEISILATYH 675
                 **********988777665 PP

>> FYVE  FYVE zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.2  12.5   2.3e-18   5.9e-15       3      65 ..      20      80 ..      18      83 .. 0.94
   2 ?   -4.1   0.2         7   1.8e+04      28      32 ..     972     976 ..     969     980 .. 0.55

  Alignments for each domain:
  == domain 1  score: 55.2 bits;  conditional E-value: 2.3e-18
                --...--SB-TTT--B--SSS--EE-TTT--EE-STTS-EEE.EEGGGTEEEEEEE-HHHHHH CS
        FYVE  3 wkddsevkkCeiCakkFsllrrrhhCrlCGkvvCekCssklvallekeaeeksvrvCkeClae 65
                w++d++++kC+ C+++Fs+ rr+hhCr+CGk++C+kC +k +  +  ++  k+++vC  C + 
  EPX74078.1 20 WMRDERTTKCSLCEAEFSFCRRKHHCRICGKIFCSKCLTKVSGEI--YDFPKEIKVCLPCASV 80
                9****************************************9777..999**********875 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 7
                 -TTT- CS
        FYVE  28 CrlCG 32 
                 Cr C 
  EPX74078.1 972 CRSCQ 976
                 44443 PP

>> PI3K_P85_iSH2  Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.4   1.8e-05     0.045      11      68 ..    1363    1420 ..    1355    1455 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.8e-05
  PI3K_P85_iSH2   11 dleklseklrevskqlqekskeydqlkeeynkiseeiqlkrqaleaFneaikmFeeqi 68  
                      +  l ++++e+s+qlqek +  d+l  e  k +  ++  +  +e+F++  + Fe++ 
     EPX74078.1 1363 RVSSLVRQFEELSQQLQEKRRRDDELVRERRKRTMPVTPSKPVVEVFSDLSNAFEDEE 1420
                     467899*************************************************985 PP

>> Cys_rich_FGFR  Cysteine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.3   5.2e-05      0.13       1      38 [.    1074    1110 ..    1074    1121 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 5.2e-05
  Cys_rich_FGFR    1 eeCkqlllrlqeevaeDykldpkLqkaCkddiekfCsd 38  
                     e+C + ++++  ++ +D+  dp+ +++C+++i   C +
     EPX74078.1 1074 EQCLNSVTTRINQLRTDWVTDPVKLQSCEEEI-ANCRS 1110
                     69******************************.88865 PP

>> Zf_RING  KIAA1045 RING finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   6.3     6e-05      0.15       7      37 ..      28      60 ..      22      69 .. 0.87
   2 ?   -3.4   0.0       4.4   1.1e+04      23      38 ..     792     807 ..     792     813 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 6e-05
     Zf_RING  7 lCeiC..evytaeelypCRvCtkvfHegClrkl 37
                 C++C  e+  ++ +  CR+C k+f  +Cl k+
  EPX74078.1 28 KCSLCeaEFSFCRRKHHCRICGKIFCSKCLTKV 60
                69***6667789******************986 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 4.4
     Zf_RING  23 RvCtkvfHegClrklg 38 
                 R+  +v+H + l+++ 
  EPX74078.1 792 RLLGRVYHLQTLENMY 807
                 56689****9999975 PP

>> T2SSG  Type II secretion system (T2SS), protein G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   0.00013      0.34      17      55 ..    1565    1605 ..    1562    1617 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00013
                  HHHHHHHHHHHHHHHTSS---TTHHHHHHHS--SS-..SS- CS
       T2SSG   17 qikslekaldlYkldvgryPtteqgLeaLvekpsge..pkn 55  
                  +++++e+++d Y l++ + Pt e+ +e L+ kp+g+  + +
  EPX74078.1 1565 KMAEIEENMDSYLLENDNQPTLEDKIENLMLKPTGThlKYQ 1605
                  6899******************************9944444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1889 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       842  (0.046963); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 1.04u 0.30s 00:00:01.34 Elapsed: 00:00:00.48
# Mc/sec: 11946.11
//
Query:       EPX74079.1  [L=553]
Description: splicing factor Prp17 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.2e-30  104.2  10.0    1.3e-07   32.2   0.1    6.9  7  WD40         WD domain, G-beta repeat
    7.5e-11   42.2   0.0     0.0098   16.2   0.0    5.0  5  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
  ------ inclusion threshold ------
       0.11   12.6   0.2       0.22   11.6   0.2    1.4  1  Cas_Csy4     CRISPR-associated protein (Cas_Csy4)


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.9   1.0   1.1e-10   6.6e-07       2      38 .]     252     290 ..     251     290 .. 0.87
   2 !   32.2   0.1   2.1e-11   1.3e-07       2      38 .]     296     333 ..     295     333 .. 0.95
   3 ?    2.3   0.0     0.059   3.5e+02       9      38 .]     349     377 ..     337     377 .. 0.60
   4 !   15.5   0.0   4.1e-06     0.025       4      37 ..     384     418 ..     381     419 .. 0.92
   5 ?   -1.4   0.0      0.88   5.3e+03      17      37 ..     441     461 ..     439     462 .. 0.77
   6 !   10.7   0.1   0.00013       0.8      17      38 .]     486     509 ..     469     509 .. 0.74
   7 !   13.0   0.0   2.4e-05      0.15       2      38 .]     514     553 .]     513     553 .] 0.85

  Alignments for each domain:
  == domain 1  score: 29.9 bits;  conditional E-value: 1.1e-10
                 EEEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 
                 ++++t++GH ++v++l+ f+ +g++l+sGs D  ++iWd
  EPX74079.1 252 KHIHTWKGHtKGVSCLRfFPTSGHLLLSGSLDSEIKIWD 290
                 679******999*****6666666678***********9 PP

  == domain 2  score: 32.2 bits;  conditional E-value: 2.1e-11
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++lrt+ GH +++++l+f+++g+ ++s+s D+t+++Wd
  EPX74079.1 296 SLLRTFHGHrKPIRDLSFNQSGSSFLSASFDKTIKLWD 333
                 689***********************9999*******9 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.059
                 SSSSEEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40   9 GHssvtslafspdgaw.lasGsdDgtvriWd 38 
                 +H +v  ++++p+ ++ +++G+ D+++  +d
  EPX74079.1 349 AH-CV-RFQVDPERPFeFLAGMSDKKILQFD 377
                 44.34.44478888889667*66*9998776 PP

  == domain 4  score: 15.5 bits;  conditional E-value: 4.1e-06
                 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 ++++t H + v+s+ +  +g+ +++ sdD + r+W
  EPX74079.1 384 VQSYTHHlGAVNSITYLENGKRFVTTSDDSSMRFW 418
                 7899999999**************99********* PP

  == domain 5  score: -1.4 bits;  conditional E-value: 0.88
                 EEETTSSEEEEE.ETTSEEEEE CS
        WD40  17 afspdgawlasG.sdDgtvriW 37 
                 a  p+g+ la + s D+ ++++
  EPX74079.1 441 ALRPNGKALA-CqSLDNCIYVY 461
                 5568999987.66999999997 PP

  == domain 6  score: 10.7 bits;  conditional E-value: 0.00013
                 E..EETTSSEEEEEETTSEEEEEE CS
        WD40  17 a..fspdgawlasGsdDgtvriWd 38 
                    fspdg+++ sG+  g+  +Wd
  EPX74079.1 486 EvgFSPDGRFVYSGDSSGNACFWD 509
                 3559**********66*******9 PP

  == domain 7  score: 13.0 bits;  conditional E-value: 2.4e-05
                 EEEEEEESS.SSEEEEEEETTSSE.EEEEE.TTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgaw.lasGs.dDgtvriWd 38 
                 ++l +l +H ++v s+ f+p  +  +a++s  Dg ++ Wd
  EPX74079.1 514 KLLSKLPAHnGPVQSMTFHPQETSkVATSSiLDGVIKYWD 553
                 6788999**777************66677755*******9 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.0   0.00079       4.7      35      71 ..     258     295 ..     244     305 .. 0.80
   2 !   16.2   0.0   1.6e-06    0.0098      37      91 ..     304     356 ..     297     357 .. 0.91
   3 ?   -0.3   0.0      0.23   1.4e+03      37      65 ..     390     418 ..     368     423 .. 0.81
   4 ?    2.5   0.0     0.031   1.9e+02      44      69 ..     440     465 ..     431     473 .. 0.87
   5 !    9.2   0.0   0.00025       1.5      42      90 ..     485     532 ..     462     534 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.00079
  ANAPC4_WD40  35 dkedsevrsLaWkp.dgklLavaysdgevrlldaesgk 71 
                  +++ + v++L++ p +g+lL  +  d+e+++ d+++ +
   EPX74079.1 258 KGHTKGVSCLRFFPtSGHLLLSGSLDSEIKIWDVYHDR 295
                  5678889999976537******************9876 PP

  == domain 2  score: 16.2 bits;  conditional E-value: 1.6e-06
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWge 91 
                  + + +r+L+++++g+ +  a  d +++l d e+gk+ + + ++++    c+ +++
   EPX74079.1 304 HRKPIRDLSFNQSGSSFLSASFDKTIKLWDTETGKCQQRFATGKQ--AHCVRFQV 356
                  6789************************************99998..79998876 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.23
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrll 65 
                  + + v+s+ + ++gk ++   +d+++r+ 
   EPX74079.1 390 HLGAVNSITYLENGKRFVTTSDDSSMRFW 418
                  55689999999****99999999988865 PP

  == domain 4  score: 2.5 bits;  conditional E-value: 0.031
  ANAPC4_WD40  44 LaWkpdgklLavaysdgevrlldaes 69 
                  +a +p+gk La    d+ + +++a +
   EPX74079.1 440 VALRPNGKALACQSLDNCIYVYSAVE 465
                  6789***************9999865 PP

  == domain 5  score: 9.2 bits;  conditional E-value: 0.00025
  ANAPC4_WD40  42 rsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                   ++ ++pdg++   + s g+  + d +s k++++l++++   v+++++ 
   EPX74079.1 485 LEVGFSPDGRFVYSGDSSGNACFWDWKSCKLLSKLPAHNGP-VQSMTFH 532
                  46889**********************************95.9999885 PP

>> Cas_Csy4  CRISPR-associated protein (Cas_Csy4)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.2   3.7e-05      0.22     109     172 ..      41     108 ..      29     114 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 3.7e-05
    Cas_Csy4 109 rrrlkrqglteeearkriadskekkl....klpflqlkSlstgqkfrlfiekkelqesekagefssYG 172
                 r  ++r++ + +e  ++++ +k++k+    ++p+l+ +  s++++ + ++e++++++ + ++ef+sYG
  EPX74079.1  41 RDLISRSKSNFKELSHNVPIEKMHKPlygpANPYLTKNQDSQKNTITGYVERENVSNAVFNQEFNSYG 108
                 5677888888888888888877766667889************************************* PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (553 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       695  (0.038764); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.41
# Mc/sec: 4016.05
//
Query:       EPX74080.1  [L=368]
Description: hypothetical protein SOCG_03294 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (368 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       536  (0.0298957); expected 358.6 (0.02)
Passed bias filter:                      282  (0.0157287); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 2498.61
//
Query:       EPX74081.1  [L=139]
Description: hypothetical protein SOCG_03295 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.11   12.3   0.0       0.16   11.7   0.0    1.2  1  Gemini_mov  Geminivirus putative movement protein


Domain annotation for each model (and alignments):
>> Gemini_mov  Geminivirus putative movement protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0     9e-06      0.16      20      59 ..      56      94 ..      43     105 .. 0.63

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 9e-06
  Gemini_mov 20 PrvptaapssselpwsrvgeiailtlvavlvlYLlytlvl 59
                 ++ + +++ s+  +s+   iai+ ++ +l++ L ++l+ 
  EPX74081.1 56 SAQESTNNAGSDSTYSKWIRIAIFFFLHLLCI-LYFMLFF 94
                34455556667777777777777777777765.3333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       658  (0.0367003); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.28s 00:00:00.70 Elapsed: 00:00:00.44
# Mc/sec: 951.72
//
Query:       EPX74082.1  [L=403]
Description: hypothetical protein SOCG_03296 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-77  259.2   2.3    4.1e-77  258.3   2.3    1.5  1  UPF0300   Uncharacterised protein family (UPF0300)


Domain annotation for each model (and alignments):
>> UPF0300  Uncharacterised protein family (UPF0300)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  258.3   2.3   2.3e-81   4.1e-77       2     211 ..     156     366 ..     155     367 .. 0.96

  Alignments for each domain:
  == domain 1  score: 258.3 bits;  conditional E-value: 2.3e-81
     UPF0300   2 lkkfeelfkelseflekgniplsvLihhvmLYdyYpeelkdalWkAvevyvseqvssgkytklhvkaaqkklgdiRlyLvkpediyvvknssdWiaisn 100
                 +kk++++  +l++++++gn+++++L++hv+LY+yYp+e++d++W+A+ vy+s++v++g+y+ +++++aq+k+g+iR+yLv+p d+y+++n+ +W+ai+n
  EPX74082.1 156 FKKYRSDGLSLCMHFATGNFTMPILVRHVFLYEYYPKEVQDSIWRAMLVYISREVKNGTYSMFQYQCAQNKIGNIRMYLVRPGDVYCFQNHFNWAAICN 254
                 799************************************************************************************************ PP

     UPF0300 101 knFqcyiqleekleekklksekskieelasvaeseeelgWLllllsigsnasafPihaYlnak.kkllesklpesllllrkeDellfqdkeeieeleel 198
                 k+F cy+ql ++++e+ +kse+ ++e + + ++s+e+lgWL+++ls+gsna+afPih+Y+n+     ++    +++++++++D+llfq+++++ +++e+
  EPX74082.1 255 KRFLCYMQLGNESDENIIKSEQICKELFPDAIISKEDLGWLFFILSLGSNAKAFPIHYYINSIvPGAVQDNYDDCVFIYHPNDSLLFQKSSHRLKMTEW 353
                 *************************************************************5413456667777************************* PP

     UPF0300 199 lkelledlakces 211
                 lkel++dl+ c++
  EPX74082.1 354 LKELRSDLSICKQ 366
                 ***********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (403 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       748  (0.0417201); expected 358.6 (0.02)
Passed bias filter:                      518  (0.0288917); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.28s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 2890.84
//
Query:       EPX74083.1  [L=596]
Description: Mre11 complex subunit Nbs1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.3e-09   36.3   0.6    1.2e-08   35.1   0.6    1.6  1  FHA       FHA domain
  ------ inclusion threshold ------
        2.9    8.3   9.2       0.71   10.3   3.2    3.0  3  ANAPC15   Anaphase-promoting complex subunit 15


Domain annotation for each model (and alignments):
>> FHA  FHA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.1   0.6   1.4e-12   1.2e-08       7      59 ..      14      75 ..      10      85 .. 0.90

  Alignments for each domain:
  == domain 1  score: 35.1 bits;  conditional E-value: 1.4e-12
                TTSSEETTSTTSTTTEEEEEEETT.........CEEEEEEEESSSSSEEETTEEESTTSEEE CS
         FHA  7 sdcdivlddpsiSrkHalikfdkg.........sgkvyleDlgSknGtfvNgqrigkgepve 59
                ++++i++ ++s+S+kHa+i++ ++         s ++ ++Dl+ k Gt vN++ i++++++e
  EPX74083.1 14 DSSNIQIISKSVSKKHAQITVSPPkatsheneiSCRIDIQDLDTKFGTTVNNEHIHSKQTYE 75
                579******************999*********************************88877 PP

>> ANAPC15  Anaphase-promoting complex subunit 15
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0      0.48   4.3e+03       8      44 ..     140     176 ..     139     188 .. 0.79
   2 ?   -1.7   0.3      0.43   3.9e+03      41      65 ..     435     458 ..     428     466 .. 0.48
   3 ?   10.3   3.2     8e-05      0.71      13      88 ..     513     587 ..     508     591 .. 0.67

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.48
     ANAPC15   8 lprvtdplwfnldrpcddEteLaqlEqehqewlqsIa 44 
                 +p+v   l f  d  ++ E+ +++l qe  ++ ++I 
  EPX74083.1 140 FPSVKTALAFLKDVKIVHEAFVQALIQEKDNYTHNIH 176
                 5678888888889999999999998888888887775 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.43
     ANAPC15  41 qsIaekdnnlvpiGKpaseeeeeee 65 
                 + I++++ ++ p+G   ++ +e+ e
  EPX74083.1 435 NVIVKEERDTSPLGLEGEQ-KEDRE 458
                 4455555555555555544.22222 PP

  == domain 3  score: 10.3 bits;  conditional E-value: 8e-05
     ANAPC15  13 dplwfnldrp.cddEteLaqlEqehqewlqsIaekdnnlvpiGKpaseeeeeeeeedeeeenddsddseesdeddde 88 
                  p+++ l+++ +d E e+  +  + +  l + ++++++l+p+ Kp s++ + + + d ee    +dd+ ++d+++d+
  EPX74083.1 513 PPVFITLSESrNDQEDEVIDIDTDPAPQLMKKTDTNTQLAPLPKPISQRPTMDIDMDMEER--VEDDTFNDDNEEDD 587
                 567777775515569999999999999999999***************4444444444333..33333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (596 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       862  (0.0480785); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.23s 00:00:00.78 Elapsed: 00:00:00.39
# Mc/sec: 4624.89
//
Query:       EPX74084.1  [L=98]
Description: SAGA complex subunit Sus1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.9e-20   71.7   0.1    5.7e-20   71.5   0.1    1.0  1  EnY2      Transcription factor e(y)2


Domain annotation for each model (and alignments):
>> EnY2  Transcription factor e(y)2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.5   0.1   3.2e-24   5.7e-20       2      82 ..       4      81 ..       3      83 .. 0.96

  Alignments for each domain:
  == domain 1  score: 71.5 bits;  conditional E-value: 3.2e-24
                HHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH..HTSS.CHHHHHHHHHHHHHHHS-HHHHHHHHHHHHH CS
        EnY2  2 akiqqkLvesGererlkelLrerLeesGWrdevkelckeiirekgleeevsveelveeitpkaralVPdevkkellqrIre 82
                ++i+++L+e+G++erl++ L+ +Le +GW  +++++++ i+re   ++ +++++l+e    +a +++Pd vk e++++I++
  EPX74084.1  4 ERISEQLQENGDYERLANDLEFKLESCGWASQLRDYTRGIARE---NTGIDFKKLYEITLHTATESIPDTVKMEMMKDIKS 81
                6899**************************************9...888******************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       518  (0.0288917); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.21s 00:00:00.56 Elapsed: 00:00:00.35
# Mc/sec: 836.52
//
Query:       EPX74085.1  [L=514]
Description: 2-oxoglutarate and Fe(II) dioxygenase domain-containing protein 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.2e-79  264.8   0.0    3.8e-75  252.5   0.0    2.4  2  Ofd1_CTDD       Oxoglutarate and iron-dependent oxygenase deg
    2.3e-31  108.3   0.0    8.4e-31  106.5   0.0    2.0  2  2OG-FeII_Oxy_4  2OG-Fe(II) oxygenase superfamily
    1.3e-15   58.0   0.0    3.4e-15   56.7   0.0    1.7  2  2OG-FeII_Oxy_3  2OG-Fe(II) oxygenase superfamily


Domain annotation for each model (and alignments):
>> Ofd1_CTDD  Oxoglutarate and iron-dependent oxygenase degradation C-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0   7.6e-05      0.45      99     183 ..      90     175 ..       8     186 .. 0.79
   2 !  252.5   0.0   6.4e-79   3.8e-75       2     249 ..     279     510 ..     278     513 .. 0.96

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 7.6e-05
                 HHHHHHHHHHH.HHHHSHHHHHHHHHHHSE.EE..-EEEEEEEEE-TTT-EE--BE----GEEEEEEEEE.---S-TTTSTT---EEE CS
   Ofd1_CTDD  99 edaeeklkeLlekllkskafrkwlalitgldll..tsesilarRfrpGkdytLatsteeeeavLevtlnl.tptkgWesgevGGyely 183
                 + + + l++L  + l s++fr  +++itg+ +l  t++++ +  + +G  + + +++   + ++   l+l  p +gW+s+  G+  ly
  EPX74085.1  90 KGMLKYLHQLR-DALYSEEFRAHIQRITGCGPLsaTKKDLSVNVYAKG-GHLMNHDDVIGSRCVSYILYLvEPDEGWKSEYGGALRLY 175
                 34457788888.8899**************8776688999********.88888888877788888877637899****888887777 PP

  == domain 2  score: 252.5 bits;  conditional E-value: 6.4e-79
                 HHHHHTTTB-GGGTSHHHHHHHHHHHHHHSEEEESS-B-HHHHHHHHHHH..HHHHHHS----SGGG--TT-EE-B-TTTEE-EEE-SSS----SSHHH CS
   Ofd1_CTDD   2 elefLlkylnpeYLtketveelqeqfeeessieledfLkkeiaeklkksleseekekekelpqkseeiekpWkvagPphkqrylyldseeatekkeeed 100
                 ++++L++y+np Y t+e +  l+++f ++s i l +fL++e++++l k + ++ek+    +p++s+e++ pWk+a+Pphk+rylyld+ee+        
  EPX74085.1 279 DTKILSQYINPLYTTTEGIGMLSKRFFKDSAIVLVEFLNPEYSKELMKRIINAEKQP---TPTHSSEVSYPWKTAIPPHKHRYLYLDHEEQG------- 367
                 789***********************************************8888886...9****************************954....... PP

                 HHHHHHHHH.HHHHSHHHHHHHHHHHSE.EE-EEEEEEEEE-TTT-EE--BE----GEEEEEEEEE---S-TTTSTT---EEEEE-------------- CS
   Ofd1_CTDD 101 aeeklkeLlekllkskafrkwlalitgldlltsesilarRfrpGkdytLatsteeeeavLevtlnltptkgWesgevGGyelymagdddeeeDpavYks 199
                    +   L ++l +  af++w++l++gl +l+s   + rRfrpG+d+tLa+++e+  a+Le+tl+l+p ++  ++e G+y++ym gd+d ++D+avY++
  EPX74085.1 368 ---PDVLLPMDLQRLPAFQRWIQLVSGL-PLESFYQIGRRFRPGSDFTLASTNET--ATLEATLCLSPGTEIANTENGAYNVYMIGDEDPNADAAVYRG 460
                 ...4456778899***************.***********************997..9***************************************** PP

                 ------EEEEE---EEEEEEEEEETTEEEEE----TT-SS-EEEEEEEEE CS
   Ofd1_CTDD 200 ddeddsvLlslaaswNslslvlrdegvlkFvKYvsasakgsrwdvsgeye 249
                 d++dd++Llsl+a+wN +slv+rdegvl+FvKYv ++a +srwd+  +++
  EPX74085.1 461 DQQDDGILLSLPAAWNVFSLVYRDEGVLEFVKYVTQAAGSSRWDIFSQWN 510
                 ************************************************97 PP

>> 2OG-FeII_Oxy_4  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.5   0.0   1.4e-34   8.4e-31       1      93 []     128     229 ..     128     229 .. 0.88
   2 ?   -3.1   0.0       2.2   1.3e+04      54      86 ..     469     503 ..     460     509 .. 0.57

  Alignments for each domain:
  == domain 1  score: 106.5 bits;  conditional E-value: 1.4e-34
  2OG-FeII_Oxy_4   1 lsvssYekgdvllnHdDvlegeRrvayilyle...eeWkeddGGaLllsd.de.....gdvtksivPkwnqlvlFevkeshsvaeva.svaekeR 85 
                     lsv++Y kg +l+nHdDv +g+R+v+yilyl    e Wk+++GGaL+l+   +     +d +k+i+P+wnql +F+vk++hs+++v+ ++++k+R
      EPX74085.1 128 LSVNVYAKGGHLMNHDDV-IGSRCVSYILYLVepdEGWKSEYGGALRLYPtLQpsfpaADYCKRIPPQWNQLSFFRVKPGHSFHDVEeVFVDKPR 221
                     589***************.9***********755589*********777514533333478*************************8579***** PP

  2OG-FeII_Oxy_4  86 lsisgWfh 93 
                     ++isgWfh
      EPX74085.1 222 MAISGWFH 229
                     *******9 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 2.2
  2OG-FeII_Oxy_4  54 ksivPkwnqlvlFevkes..hsvaevasvaekeRl 86 
                      s++ +wn + l    e+    v+ v++ a  +R+
      EPX74085.1 469 LSLPAAWNVFSLVYRDEGvlEFVKYVTQAAGSSRW 503
                     56667777777655544333444555555555565 PP

>> 2OG-FeII_Oxy_3  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.7   0.0   5.7e-19   3.4e-15       2      96 .]     129     229 ..     128     229 .. 0.94
   2 ?   -3.4   0.0         3   1.8e+04      10      49 ..     402     443 ..     397     459 .. 0.59

  Alignments for each domain:
  == domain 1  score: 56.7 bits;  conditional E-value: 5.7e-19
                     EEEEE-TT-EEEEE-SS----TT.-.EEEEEEEEE........ET-B--EEE.................---TT-EEEEE-..B-T.EEE--B.- CS
  2OG-FeII_Oxy_3   2 qvlrygegqeykpHvDnfekeegsgqrrltvllyLne....keseeGGelelyekdk.......eavkikpkkgrlvlFesdellp.Hevlpvtk 84 
                      v++y +g+++  H+D +      g+r ++++lyL e    ++se GG+l+ly++ +        +++i+p+ ++l +F+++  ++ H v++v  
      EPX74085.1 129 SVNVYAKGGHLMNHDDVI------GSRCVSYILYLVEpdegWKSEYGGALRLYPTLQpsfpaadYCKRIPPQWNQLSFFRVKPGHSfHDVEEVFV 217
                     6899************86......78*********999999999***********99******99****************988889******98 PP

                     SS-EEEEEEEEE CS
  2OG-FeII_Oxy_3  85 ggeRlsltgwir 96 
                     +++R++++gw++
      EPX74085.1 218 DKPRMAISGWFH 229
                     88*********8 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 3
                     -EEEEE-SS----TT.-.EEEEEEEEE.......ET-B--EEE CS
  2OG-FeII_Oxy_3  10 qeykpHvDnfekeegsgqrrltvllyLne...keseeGGelel 49 
                      +++p  D++  ++++++ +l ++l L++    +++e G+  +
      EPX74085.1 402 RRFRPGSDFT-LASTNETATLEATLCLSPgteIANTENGAYNV 443
                     5566666654.34444667777777777765423355565555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (514 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       424  (0.0236488); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.37
# Mc/sec: 4145.02
//
Query:       EPX74086.1  [L=907]
Description: U4/U6 X U5 tri-snRNP complex subunit Prp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-48  163.8   3.4    8.5e-48  162.5   3.4    1.7  1  PRP1_N    PRP1 splicing factor, N-terminal
    1.5e-27   93.9  10.9    0.00032   21.3   0.0   12.8 15  TPR_14    Tetratricopeptide repeat
    1.4e-20   73.5   0.9     0.0046   17.5   0.0    8.8  8  TPR_19    Tetratricopeptide repeat
    3.1e-12   46.0   0.2      0.016   15.5   0.0    8.5  8  TPR_17    Tetratricopeptide repeat
    2.3e-11   42.9   1.7       0.16   12.1   0.1    8.0  9  TPR_2     Tetratricopeptide repeat
    4.2e-09   36.9   0.0    0.00046   20.8   0.0    4.7  4  TPR_16    Tetratricopeptide repeat
    2.2e-08   33.7   1.1        2.4    8.6   0.0    6.9  6  TPR_8     Tetratricopeptide repeat
    2.2e-08   33.6   0.0       0.36   10.7   0.0    6.2  6  TPR_1     Tetratricopeptide repeat
    2.8e-06   26.5   4.7       0.06   12.3   0.0    4.7  6  NARP1     NMDA receptor-regulated protein 1
    4.2e-06   27.0   6.2      0.021   14.8   0.1    5.1  5  Suf       Suppressor of forked protein (Suf)
    1.6e-05   25.2   0.7        3.9    8.3   0.0    6.1  6  TPR_6     Tetratricopeptide repeat
    2.6e-05   23.5  18.2      0.012   14.7   1.1    5.2  4  NRDE-2    NRDE-2, necessary for RNA interference
    2.8e-05   23.7   0.0       0.36   10.5   0.0    5.3  5  TPR_11    TPR repeat
    0.00017   21.8   0.2        1.4    9.2   0.0    4.7  4  TPR_12    Tetratricopeptide repeat
     0.0012   19.1   0.4        7.5    6.9   0.0    4.4  4  ANAPC3    Anaphase-promoting complex, cyclosome, subunit 3
     0.0012   18.6   0.0        2.2    8.3   0.1    5.3  5  TPR_10    Tetratricopeptide repeat
      0.002   17.9   8.9        1.1    9.0   0.1    4.9  5  TPR_21    Tetratricopeptide repeat-like domain
     0.0036   17.4   0.7        6.1    7.1   0.0    4.5  4  TPR_9     Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PRP1_N  PRP1 splicing factor, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  162.5   3.4   8.5e-51   8.5e-48       1     148 []      13     158 ..      13     158 .. 0.86

  Alignments for each domain:
  == domain 1  score: 162.5 bits;  conditional E-value: 8.5e-51
                 ---S--HHHHHT------............................---------------------------------------HHHHHHHHHHHHHH CS
      PRP1_N   1 aPagYvaGlGRGAtGfttrsdigpareaeaseeekkkkkeeeeeeeedeedlqdeendefegeseglfakaeydedDeeAdriyeeiderlderrkkrr 99 
                 +P++Y+aGlGRGAtGfttrsd+gpa+e  +++  k++ + ++++ eedeed  d++++   +++  lfa+a+y ++DeeAdriy++++++l++rrk++r
  EPX74086.1  13 PPPNYIAGLGRGATGFTTRSDLGPAQELPSQDAVKTAIE-KRKAGEEDEEDDIDPRYQD-PENEVALFATAPYGAEDEEADRIYQTVEDNLSKRRKTQR 109
                 8**************************876655544444.4444555555555555555.344459********************************* PP

                 TT-------......-HHHHHHHHHHHHHTT--HHHHHS----B-SS-H CS
      PRP1_N 100 eakekeelekvreekpkiqeqFadlkrkLaevseeeWeniPevgdltrk 148
                 e++e+ ++e++++e+pki++qFadlkr+L+++++e+W niPe gdltrk
  EPX74086.1 110 ERQEQLQRERIEKENPKISSQFADLKRGLSTLTDEDWLNIPEPGDLTRK 158
                 ***********************************************98 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   2.8e-05     0.028      13      44 .]     257     288 ..     255     288 .. 0.94
   2 ?    3.2   0.0       0.2     2e+02       4      44 .]     282     322 ..     281     322 .. 0.91
   3 ?   -1.1   0.0       4.9   4.9e+03      18      40 ..     326     348 ..     324     352 .. 0.89
   4 ?    1.4   0.0      0.77   7.7e+02      23      41 ..     362     380 ..     358     383 .. 0.85
   5 ?    2.7   0.4       0.3     3e+02      16      44 .]     386     414 ..     380     414 .. 0.90
   6 ?    4.9   0.7      0.06        60      10      44 .]     410     444 ..     405     444 .. 0.91
   7 ?    3.8   0.1      0.14   1.3e+02       2      29 ..     436     463 ..     435     468 .. 0.89
   8 !   10.6   0.0   0.00087      0.87       3      43 ..     547     587 ..     545     587 .. 0.91
   9 ?    1.5   0.0      0.73   7.2e+02      15      43 ..     593     621 ..     591     622 .. 0.90
  10 ?    4.7   0.1     0.067        67       2      38 ..     614     649 ..     613     655 .. 0.85
  11 !   21.3   0.0   3.2e-07   0.00032      12      44 .]     657     689 ..     647     689 .. 0.89
  12 !   18.7   0.0   2.2e-06    0.0022       3      44 .]     682     723 ..     681     723 .. 0.96
  13 ?    3.5   0.0      0.16   1.6e+02      15      40 ..     727     752 ..     723     756 .. 0.84
  14 ?    5.6   0.0     0.036        35       4      38 ..     750     784 ..     748     790 .. 0.86
  15 ?    3.6   0.0      0.15   1.5e+02       8      38 ..     818     848 ..     813     856 .. 0.74

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 2.8e-05
      TPR_14  13 alGdpdeAiallrralalaPddaeawlllaql 44 
                  lGd ++A++ll+ +++++P++a  w + a+l
  EPX74086.1 257 DLGDVKKARKLLQSVIETNPKHASGWVAAARL 288
                 58**************************9996 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.2
      TPR_14   4 llalaeallalGdpdeAiallrralalaPddaeawlllaql 44 
                 + a+a++++ + +  +A+ l  + ++ +P ++++w++  +l
  EPX74086.1 282 WVAAARLEEVANKNSQARILILKGCDNCPRSEDVWMEAIRL 322
                 78899999999999*********************998775 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 4.9
      TPR_14  18 deAiallrralalaPddaeawll 40 
                 deA  +  +a++  P + ++wl+
  EPX74086.1 326 DEAKVIIADAVRNLPHSVTLWLE 348
                 78999999*************86 PP

  == domain 4  score: 1.4 bits;  conditional E-value: 0.77
      TPR_14  23 llrralalaPddaeawlll 41 
                 + ++al+++P++  +w + 
  EPX74086.1 362 IIKKALEHNPTSVGLWKEA 380
                 6789***********9875 PP

  == domain 5  score: 2.7 bits;  conditional E-value: 0.3
      TPR_14  16 dpdeAiallrralalaPddaeawlllaql 44 
                 +  +A+ ll ra++l P + ++wl+la+l
  EPX74086.1 386 EVTDARILLARAVELIPMSIDLWLALARL 414
                 6789999**********99*******997 PP

  == domain 6  score: 4.9 bits;  conditional E-value: 0.06
      TPR_14  10 allalGdpdeAiallrralalaPddaeawlllaql 44 
                 al++l+ ++ A ++l++a ++  ++ e+w++ a+l
  EPX74086.1 410 ALARLETYKNAQKVLNKARQTIRTSHEVWIAAARL 444
                 6779999**************9*********9996 PP

  == domain 7  score: 3.8 bits;  conditional E-value: 0.14
      TPR_14   2 eallalaeallalGdpdeAiallrrala 29 
                 e++ a+a++++++G+  + +++  r +a
  EPX74086.1 436 EVWIAAARLEEQQGNVSRVEKIMARGIA 463
                 7899**************9999998876 PP

  == domain 8  score: 10.6 bits;  conditional E-value: 0.00087
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddaeawlllaq 43 
                  +l+++e +   G +d+   +l++a++++P+ + +wl +a+
  EPX74086.1 547 IWLRAVETEKVYGSTDTVSSILEKAIEACPKTELIWLVYAK 587
                 68888888889999999999*******************96 PP

  == domain 9  score: 1.5 bits;  conditional E-value: 0.73
      TPR_14  15 GdpdeAiallrralalaPddaeawlllaq 43 
                 Gd  +A+++l ra + + +++e+wl+ ++
  EPX74086.1 593 GDVNGARNILGRAFDFNSNSEEIWLAAVK 621
                 78889*******************99876 PP

  == domain 10  score: 4.7 bits;  conditional E-value: 0.067
      TPR_14   2 eallalaeallalGdpdeAiallrralalaPddaeaw 38 
                 e +la++++++ + + ++A++ll ra +   +++++w
  EPX74086.1 614 EIWLAAVKLEFVNNEDERAEKLLARA-RIESGSERIW 649
                 679**********************9.6666667776 PP

  == domain 11  score: 21.3 bits;  conditional E-value: 3.2e-07
      TPR_14  12 lalGdpdeAiallrralalaPddaeawlllaql 44 
                 + lG++deA+all++al+ +P+ + +w++ +q+
  EPX74086.1 657 RVLGKLDEALALLEDALKIFPTYDKFWMMKGQI 689
                 458**************************9985 PP

  == domain 12  score: 18.7 bits;  conditional E-value: 2.2e-06
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddaeawlllaql 44 
                  +++ +++l+ +Gd+ +A++++    +++P + ++w+lla+l
  EPX74086.1 682 FWMMKGQILEDSGDTVKARDAFITGTKHCPHSVALWILLARL 723
                 59999***********************************97 PP

  == domain 13  score: 3.5 bits;  conditional E-value: 0.16
      TPR_14  15 GdpdeAiallrralalaPddaeawll 40 
                 ++  +A+ +l+ra  ++P+++ +wl+
  EPX74086.1 727 ENIVRARVVLDRAKVRNPKNELLWLE 752
                 56668999*****99*********86 PP

  == domain 14  score: 5.6 bits;  conditional E-value: 0.036
      TPR_14   4 llalaeallalGdpdeAiallrralalaPddaeaw 38 
                 +l+ ++ + + G++ +  a+l +al+ +P++  +w
  EPX74086.1 750 WLEVLKMENRIGNTSQVKAALAKALQECPSSGLLW 784
                 77777788899******************998888 PP

  == domain 15  score: 3.6 bits;  conditional E-value: 0.15
      TPR_14   8 aeallalGdpdeAiallrralalaPddaeaw 38 
                 a+ l    +pd++++ + +a++++ d+ ++w
  EPX74086.1 818 ARMLHSESKPDKSREWFLKAIRADQDNGDVW 848
                 677777889*************776665444 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.0   0.00068      0.68       5      45 ..     259     299 ..     256     304 .. 0.85
   2 ?    1.1   0.1      0.58   5.8e+02       6      34 ..     386     414 ..     382     415 .. 0.79
   3 !   10.2   0.1   0.00086      0.85       6      56 ..     416     466 ..     411     470 .. 0.92
   4 ?    1.8   0.0      0.35   3.5e+02      10      64 ..     530     584 ..     527     587 .. 0.65
   5 !   17.5   0.0   4.6e-06    0.0046       5      59 ..     593     646 ..     593     652 .. 0.91
   6 !   17.3   0.0   5.2e-06    0.0052       5      50 ..     660     705 ..     659     723 .. 0.86
   7 ?    2.4   0.0      0.23   2.3e+02      22      58 ..     711     746 ..     707     753 .. 0.81
   8 ?   -1.3   0.0       3.2   3.2e+03      17      60 ..     803     846 ..     798     849 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00068
      TPR_19   5 gdyaeAlalleqalqedpknaearllLAeallalgqldeAe 45 
                 gd   A +ll+++++ +pk+a  + + A++   ++   +A+
  EPX74086.1 259 GDVKKARKLLQSVIETNPKHASGWVAAARLEEVANKNSQAR 299
                 89999999999999999999999999999988888888887 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.58
      TPR_19   6 dyaeAlalleqalqedpknaearllLAea 34 
                   ++A  ll++a +  p + +++l+LA++
  EPX74086.1 386 EVTDARILLARAVELIPMSIDLWLALARL 414
                 56777788888888888889999998886 PP

  == domain 3  score: 10.2 bits;  conditional E-value: 0.00086
      TPR_19   6 dyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedp 56 
                  y +A++ l +a q    + e++++ A++  ++g++   e+++++  +e +
  EPX74086.1 416 TYKNAQKVLNKARQTIRTSHEVWIAAARLEEQQGNVSRVEKIMARGIAELQ 466
                 799****************************************99887766 PP

  == domain 4  score: 1.8 bits;  conditional E-value: 0.35
      TPR_19  10 AlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpddaryasL 64 
                 A a +++ l  +p n++++l+ +e     g +d    +L+++ e+ p+++ ++ +
  EPX74086.1 530 ARAVFAYTLRVYPSNENIWLRAVETEKVYGSTDTVSSILEKAIEACPKTELIWLV 584
                 6777888888888888888888777666666666666666666655555555544 PP

  == domain 5  score: 17.5 bits;  conditional E-value: 4.6e-06
      TPR_19   5 gdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpdda 59 
                 gd   A ++l +a++ + +++e++l+ +++ + +++ + Ae+lL+++  e    +
  EPX74086.1 593 GDVNGARNILGRAFDFNSNSEEIWLAAVKLEFVNNEDERAEKLLARARIESGS-E 646
                 89999*****************************************9877766.5 PP

  == domain 6  score: 17.3 bits;  conditional E-value: 5.2e-06
      TPR_19   5 gdyaeAlalleqalqedpknaearllLAeallalgqldeAealLda 50 
                 g+++eAlalle al+  p ++  ++   ++l  +g++ +A+++  +
  EPX74086.1 660 GKLDEALALLEDALKIFPTYDKFWMMKGQILEDSGDTVKARDAFIT 705
                 89**************************************998755 PP

  == domain 7  score: 2.4 bits;  conditional E-value: 0.23
      TPR_19  22 pknaearllLAeallalgqldeAealLdalpeedpdd 58 
                 p++ ++++lLA++  +  ++  A+ +Ld++   +p++
  EPX74086.1 711 PHSVALWILLARLE-EKENIVRARVVLDRAKVRNPKN 746
                 89999999999975.5678999999999998888875 PP

  == domain 8  score: -1.3 bits;  conditional E-value: 3.2
      TPR_19  17 alqedpknaearllLAeallalgqldeAealLdalpeedpddar 60 
                 al +  +n++++   A+ l +   +d+ ++   ++ ++d+d+ +
  EPX74086.1 803 ALRKCEGNSYLLCTIARMLHSESKPDKSREWFLKAIRADQDNGD 846
                 55555677888888899999999999999999999999999655 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0     0.069        69       3      33 ..     269     299 ..     267     300 .. 0.86
   2 ?    4.7   0.0     0.045        45       3      16 ..     364     377 ..     362     379 .. 0.87
   3 ?   -1.1   0.1       3.3   3.3e+03       5      28 ..     397     421 ..     393     429 .. 0.64
   4 ?    2.0   0.0      0.33   3.3e+02       2      32 ..     568     598 ..     567     600 .. 0.82
   5 !   15.5   0.0   1.6e-05     0.016       1      33 [.     668     700 ..     668     701 .. 0.95
   6 ?    0.6   0.0      0.99   9.8e+02       7      24 ..     708     725 ..     703     729 .. 0.86
   7 ?    0.5   0.0       1.1     1e+03       4      32 ..     802     830 ..     800     832 .. 0.82
   8 ?    4.9   0.0      0.04        40       2      17 ..     834     849 ..     833     856 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.069
      TPR_17   3 lkaleldPnnadaynnLAelllknGdlmtAr 33 
                 + ++e +P++a  +   A+l + +++  +Ar
  EPX74086.1 269 QSVIETNPKHASGWVAAARLEEVANKNSQAR 299
                 668*****************99888877776 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.045
      TPR_17   3 lkaleldPnnaday 16 
                 +kale++P+++ ++
  EPX74086.1 364 KKALEHNPTSVGLW 377
                 8********99776 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 3.3
      TPR_17   5 aleldPnnadaynnLAell.lknGd 28 
                 a+el P + d++  LA+l  +kn +
  EPX74086.1 397 AVELIPMSIDLWLALARLEtYKNAQ 421
                 5555566779999999997345555 PP

  == domain 4  score: 2.0 bits;  conditional E-value: 0.33
      TPR_17   2 ylkaleldPnnadaynnLAelllknGdlmtA 32 
                 ++ka+e +P+    +  +A+  +++Gd   A
  EPX74086.1 568 LEKAIEACPKTELIWLVYAKERKNIGDVNGA 598
                 69*******9888888888888888887666 PP

  == domain 5  score: 15.5 bits;  conditional E-value: 1.6e-05
      TPR_17   1 lylkaleldPnnadaynnLAelllknGdlmtAr 33 
                 l++ al++ P++ +++ +++++l+  Gd+ +Ar
  EPX74086.1 668 LLEDALKIFPTYDKFWMMKGQILEDSGDTVKAR 700
                 5799***************************98 PP

  == domain 6  score: 0.6 bits;  conditional E-value: 0.99
      TPR_17   7 eldPnnadaynnLAelll 24 
                 +++P ++ ++ +LA+l +
  EPX74086.1 708 KHCPHSVALWILLARLEE 725
                 799************976 PP

  == domain 7  score: 0.5 bits;  conditional E-value: 1.1
      TPR_17   4 kaleldPnnadaynnLAelllknGdlmtA 32 
                  al+++  n+++++  A+ l++  ++++ 
  EPX74086.1 802 DALRKCEGNSYLLCTIARMLHSESKPDKS 830
                 699999************99877666665 PP

  == domain 8  score: 4.9 bits;  conditional E-value: 0.04
      TPR_17   2 ylkaleldPnnadayn 17 
                 +lka++ d +n d++ 
  EPX74086.1 834 FLKAIRADQDNGDVWV 849
                 89*********88775 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0     0.013        13      14      34 .]     258     278 ..     255     278 .. 0.93
   2 ?   -0.3   0.0       1.6   1.6e+03      25      33 ..     364     372 ..     361     373 .. 0.87
   3 ?   -2.5   0.0       8.2   8.1e+03      18      32 ..     388     402 ..     385     402 .. 0.84
   4 ?   -2.7   0.3       9.5   9.5e+03      10      28 ..     410     428 ..     409     429 .. 0.77
   5 ?   -2.1   0.0         6     6e+03       2      17 ..     436     451 ..     435     456 .. 0.87
   6 !   12.1   0.1   0.00016      0.16      14      34 .]     659     679 ..     655     679 .. 0.92
   7 !    7.2   0.0    0.0062       6.2       3      32 ..     682     711 ..     680     713 .. 0.87
   8 ?   -1.4   0.0       3.6   3.6e+03      21      33 ..     767     779 ..     760     780 .. 0.78
   9 !    6.6   0.0    0.0094       9.4       3      34 .]     813     844 ..     811     844 .. 0.88

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.013
       TPR_2  14 lgdyeeAleafekAleldPnn 34 
                 lgd ++A+++++ ++e +P++
  EPX74086.1 258 LGDVKKARKLLQSVIETNPKH 278
                 8******************86 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 1.6
       TPR_2  25 ekAleldPn 33 
                 +kAle++P+
  EPX74086.1 364 KKALEHNPT 372
                 79******8 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 8.2
       TPR_2  18 eeAleafekAleldP 32 
                  +A+ ++ +A+el P
  EPX74086.1 388 TDARILLARAVELIP 402
                 57999999***9976 PP

  == domain 4  score: -2.7 bits;  conditional E-value: 9.5
       TPR_2  10 ayyklgdyeeAleafekAl 28 
                 a+++l  y+ A + ++kA 
  EPX74086.1 410 ALARLETYKNAQKVLNKAR 428
                 5666777999999999995 PP

  == domain 5  score: -2.1 bits;  conditional E-value: 6
       TPR_2   2 ealynlGlayyklgdy 17 
                 e++ + +++ +++g+ 
  EPX74086.1 436 EVWIAAARLEEQQGNV 451
                 799999********96 PP

  == domain 6  score: 12.1 bits;  conditional E-value: 0.00016
       TPR_2  14 lgdyeeAleafekAleldPnn 34 
                 lg+++eAl+++e Al++ P++
  EPX74086.1 659 LGKLDEALALLEDALKIFPTY 679
                 8******************85 PP

  == domain 7  score: 7.2 bits;  conditional E-value: 0.0062
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldP 32 
                  +++ G++++ +gd  +A++af    +++P
  EPX74086.1 682 FWMMKGQILEDSGDTVKARDAFITGTKHCP 711
                 799******************977777777 PP

  == domain 8  score: -1.4 bits;  conditional E-value: 3.6
       TPR_2  21 leafekAleldPn 33 
                 ++a+ kAl+ +P 
  EPX74086.1 767 KAALAKALQECPS 779
                 68899****9996 PP

  == domain 9  score: 6.6 bits;  conditional E-value: 0.0094
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldPnn 34 
                 +l+ +++ +    ++++ +e+f kA++ d +n
  EPX74086.1 813 LLCTIARMLHSESKPDKSREWFLKAIRADQDN 844
                 67888999999999*************99876 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.0    0.0028       2.8       9      65 ..     257     310 ..     257     313 .. 0.89
   2 ?   -0.8   0.0       2.5   2.5e+03      35      61 ..     614     640 ..     588     646 .. 0.64
   3 !   20.8   0.0   4.6e-07   0.00046       9      56 ..     658     703 ..     654     714 .. 0.90
   4 ?   -0.1   0.0       1.6   1.6e+03      41      66 ..     818     843 ..     817     844 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0028
      TPR_16   9 ragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalraap 65 
                 ++gd  +A+++l+ +++ +   P +a  + + +++  +++    A+ l+++  ++ p
  EPX74086.1 257 DLGDVKKARKLLQSVIETN---PKHASGWVAAARLEEVANKNSQARILILKGCDNCP 310
                 5799***************...***************99999999988888777766 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 2.5
      TPR_16  35 eAllllgdaalrqgrlaeAaalyraal 61 
                 e +l+   + +++++ ++A+ l+++a 
  EPX74086.1 614 EIWLAAVKLEFVNNEDERAEKLLARAR 640
                 466666677777788888887777764 PP

  == domain 3  score: 20.8 bits;  conditional E-value: 4.6e-07
      TPR_16   9 ragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAa.al 56 
                  +g+ d+A+a+le alk +   P    +++ +g+++   g+  +A+ a+
  EPX74086.1 658 VLGKLDEALALLEDALKIF---PTYDKFWMMKGQILEDSGDTVKARdAF 703
                 589****************...************************665 PP

  == domain 4  score: -0.1 bits;  conditional E-value: 1.6
      TPR_16  41 gdaalrqgrlaeAaalyraalraapd 66 
                 ++++   +  ++ ++++++a+ra+ d
  EPX74086.1 818 ARMLHSESKPDKSREWFLKAIRADQD 843
                 66778889999**********99877 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0     0.063        62      13      34 .]     257     278 ..     255     278 .. 0.94
   2 ?    0.3   0.1       1.1   1.1e+03      11      27 ..     411     427 ..     409     427 .. 0.86
   3 ?   -0.6   0.0       2.1   2.1e+03      23      33 ..     567     577 ..     565     578 .. 0.84
   4 ?    5.9   0.0     0.018        18      14      33 ..     659     678 ..     658     679 .. 0.93
   5 ?    5.0   0.0     0.035        35       2      24 ..     681     703 ..     680     708 .. 0.87
   6 !    8.6   0.0    0.0024       2.4       3      34 .]     813     844 ..     811     844 .. 0.92

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.063
                 HTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8  13 klgdyeeAkeyyekaleldpdn 34 
                 +lgd ++A + ++ ++e +p++
  EPX74086.1 257 DLGDVKKARKLLQSVIETNPKH 278
                 79******************96 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 1.1
                 HHHTT-HHHHHHHHHHH CS
       TPR_8  11 ylklgdyeeAkeyyeka 27 
                 +  l+ y++A+++++ka
  EPX74086.1 411 LARLETYKNAQKVLNKA 427
                 667889*********98 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 2.1
                 HHHHHHHHHHH CS
       TPR_8  23 yyekaleldpd 33 
                  +eka+e+ p+
  EPX74086.1 567 ILEKAIEACPK 577
                 689****9997 PP

  == domain 4  score: 5.9 bits;  conditional E-value: 0.018
                 TT-HHHHHHHHHHHHHHHHH CS
       TPR_8  14 lgdyeeAkeyyekaleldpd 33 
                 lg+++eA + +e al++ p+
  EPX74086.1 659 LGKLDEALALLEDALKIFPT 678
                 89***************886 PP

  == domain 5  score: 5.0 bits;  conditional E-value: 0.035
                 CHHHHHHHHHHHTT-HHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyy 24 
                 + ++++g+i+++ gd  +A  ++
  EPX74086.1 681 KFWMMKGQILEDSGDTVKARDAF 703
                 57*************98888776 PP

  == domain 6  score: 8.6 bits;  conditional E-value: 0.0024
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyekaleldpdn 34 
                 +++ +++ +++  + +++ e++ ka+++d+dn
  EPX74086.1 813 LLCTIARMLHSESKPDKSREWFLKAIRADQDN 844
                 578999***********************986 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0     0.045        45      13      34 .]     257     278 ..     256     278 .. 0.93
   2 ?    1.4   0.0      0.31   3.1e+02      25      33 ..     364     372 ..     363     373 .. 0.89
   3 ?   -2.9   0.1       7.1     7e+03      18      24 ..     569     575 ..     568     576 .. 0.71
   4 !   10.7   0.0   0.00036      0.36      14      34 .]     659     679 ..     655     679 .. 0.93
   5 ?    3.2   0.0     0.087        87       3      32 ..     682     711 ..     681     713 .. 0.85
   6 ?    5.2   0.0      0.02        20       3      34 .]     813     844 ..     811     844 .. 0.91

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.045
                 HTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1  13 klgkydeAleyyekALelnPnn 34 
                  lg+ ++A +  + ++e nP++
  EPX74086.1 257 DLGDVKKARKLLQSVIETNPKH 278
                 59******************86 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.31
                 HHHHHHSTT CS
       TPR_1  25 ekALelnPn 33 
                 +kALe+nP+
  EPX74086.1 364 KKALEHNPT 372
                 7*******7 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 7.1
                 HHHHHHH CS
       TPR_1  18 deAleyy 24 
                 ++A+e++
  EPX74086.1 569 EKAIEAC 575
                 7788776 PP

  == domain 4  score: 10.7 bits;  conditional E-value: 0.00036
                 TT-HHHHHHHHHHHHHHSTTH CS
       TPR_1  14 lgkydeAleyyekALelnPnn 34 
                 lgk+deAl+  e AL++ P++
  EPX74086.1 659 LGKLDEALALLEDALKIFPTY 679
                 8******************97 PP

  == domain 5  score: 3.2 bits;  conditional E-value: 0.087
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHST CS
       TPR_1   3 alynlGnayfklgkydeAleyyekALelnP 32 
                  +  +G+++   g+  +A +++    +++P
  EPX74086.1 682 FWMMKGQILEDSGDTVKARDAFITGTKHCP 711
                 6999*****************977666666 PP

  == domain 6  score: 5.2 bits;  conditional E-value: 0.02
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   3 alynlGnayfklgkydeAleyyekALelnPnn 34 
                  l+ ++ ++++  k+d+  e + kA++ + +n
  EPX74086.1 813 LLCTIARMLHSESKPDKSREWFLKAIRADQDN 844
                 678899999******************99987 PP

>> NARP1  NMDA receptor-regulated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.3       1.1   1.1e+03     404     433 ..      95     124 ..      76     152 .. 0.54
   2 ?   -1.5   0.0      0.92   9.1e+02      49      84 ..     256     291 ..     247     309 .. 0.65
   3 ?   -1.8   0.0       1.1   1.1e+03     212     229 ..     360     377 ..     344     392 .. 0.79
   4 ?    2.7   0.1     0.047        47     203     251 ..     412     460 ..     395     464 .. 0.91
   5 !    8.7   0.0    0.0007      0.69     206     284 ..     559     637 ..     548     645 .. 0.92
   6 !   12.3   0.0     6e-05      0.06     205     248 ..     659     702 ..     654     708 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.1
                 -S-HHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       NARP1 404 elseaerkklrkkakkaekkaekeeaekae 433
                 ++ e++  k rk ++  ++++++e  ek++
  EPX74086.1  95 QTVEDNLSKRRKTQRERQEQLQRERIEKEN 124
                 333444444444444334444444333332 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.92
                 HHTT-HHHHHHHHHHHHHH-TT-CHHHHHHHHHT.. CS
       NARP1  49 lkLgrkeeAeatyeaLlernpenskYyeglekakkl 84 
                 + Lg+ ++A++++++ +e np + + + +  + +++
  EPX74086.1 256 TDLGDVKKARKLLQSVIETNPKHASGWVAAARLEEV 291
                 456777777777777777777666555554444444 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 1.1
                 HHHHHHHHHH-TT-HHHH CS
       NARP1 212 leyidkaiehtptlvely 229
                  ++i ka+eh+pt+v l+
  EPX74086.1 360 KRIIKKALEHNPTSVGLW 377
                 35799********99886 PP

  == domain 4  score: 2.7 bits;  conditional E-value: 0.047
                 HHHT-SHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHHHHHHHH CS
       NARP1 203 dklgsrekAleyidkaiehtptlvelyltKarilkhaGdlkkAaevmee 251
                  +l+ +++A ++++ka +   t+ e++++ ar+ +++G++++  ++m +
  EPX74086.1 412 ARLETYKNAQKVLNKARQTIRTSHEVWIAAARLEEQQGNVSRVEKIMAR 460
                 56788999*********************************99999965 PP

  == domain 5  score: 8.7 bits;  conditional E-value: 0.0007
                 T-SHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHHHHHHHHHHHCTTT-HHHHHHHHHHHHHTT-HHHHHHHHT CS
       NARP1 206 gsrekAleyidkaiehtptlvelyltKarilkhaGdlkkAaevmeearklDlaDRyiNskcakymLradeveeAeetvs 284
                 gs++   ++++kaie  p+   ++l+ a+  k  Gd+++A +++ +a  +  +   i   ++k  + ++e e+Ae++++
  EPX74086.1 559 GSTDTVSSILEKAIEACPKTELIWLVYAKERKNIGDVNGARNILGRAFDFNSNSEEIWLAAVKLEFVNNEDERAEKLLA 637
                 6677788899**********999****************************************************9886 PP

  == domain 6  score: 12.3 bits;  conditional E-value: 6e-05
                 HT-SHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHHHHH CS
       NARP1 205 lgsrekAleyidkaiehtptlvelyltKarilkhaGdlkkAaev 248
                 lg+ ++Al +++ a++  pt   ++++K++il+ +Gd  kA ++
  EPX74086.1 659 LGKLDEALALLEDALKIFPTYDKFWMMKGQILEDSGDTVKARDA 702
                 57889***********************************9865 PP

>> Suf  Suppressor of forked protein (Suf)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.6      0.99   9.9e+02     213     246 ..      92     128 ..      31     213 .. 0.62
   2 !   14.8   0.1   2.1e-05     0.021       9      65 ..     409     464 ..     405     581 .. 0.80
   3 !    8.8   0.0    0.0014       1.4       2      59 ..     580     636 ..     579     640 .. 0.93
   4 ?   -0.6   0.0         1     1e+03      94     139 ..     633     678 ..     633     686 .. 0.81
   5 ?    1.1   0.0      0.31   3.1e+02      77     128 ..     720     768 ..     665     781 .. 0.72

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.99
         Suf 213 dklqmvespk...kgaagrrleqqrksessksaeaas 246
                 ++ q ve +    + ++ +r+eq +++ ++k ++++s
  EPX74086.1  92 RIYQTVEDNLskrRKTQRERQEQLQRERIEKENPKIS 128
                 2333333222222222222223333333333333333 PP

  == domain 2  score: 14.8 bits;  conditional E-value: 2.1e-05
         Suf   9 rasrRaeGikgaRkvFkkARkkprltyevyvasAllEyyiskdkkvAtkIFelGlKk 65 
                  a+ R e  k+a kv +kAR++ r+++ev++a+A lE + + + +   kI  +G+ +
  EPX74086.1 409 LALARLETYKNAQKVLNKARQTIRTSHEVWIAAARLEEQ-QGNVSRVEKIMARGIAE 464
                 577899*******************************88.55555577777777655 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.0014
         Suf   2 lvwikymrasrRaeGikgaRkvFkkARkkprltyevyvasAllEyyiskdkkvAtkIF 59 
                 l w  y +  + +  ++gaR++  +A  +++ + e++ a+  lE++ ++d++ A k +
  EPX74086.1 580 LIWLVYAKERKNIGDVNGARNILGRAFDFNSNSEEIWLAAVKLEFVNNEDER-AEKLL 636
                 789999999999999**********************************999.98865 PP

  == domain 4  score: -0.6 bits;  conditional E-value: 1
         Suf  94 ekvvsklskekeakelykkfleyestfgdlssilklekRmeelfpe 139
                 ek++++   e  ++ +++k ++ e   g l++ l l +   ++fp 
  EPX74086.1 633 EKLLARARIESGSERIWTKSISLERVLGKLDEALALLEDALKIFPT 678
                 566777777777999***************9999987777777776 PP

  == domain 5  score: 1.1 bits;  conditional E-value: 0.31
         Suf  77 ldyLislnddnnaRvlfekvvsklskekeakelykkfleyestfgdlssilk 128
                 l  L + ++  +aRv+++++  +  k++    l+   l+ e ++g+ s+++ 
  EPX74086.1 720 LARLEEKENIVRARVVLDRAKVRNPKNE---LLWLEVLKMENRIGNTSQVKA 768
                 3445555556668999998877666665...8***************99975 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       7.5   7.5e+03      15      26 ..      86      97 ..      81     100 .. 0.82
   2 !    8.2   0.0    0.0043       4.3      13      32 ..     258     277 ..     248     278 .. 0.91
   3 !    8.3   0.0    0.0039       3.9       9      32 ..     654     678 ..     635     679 .. 0.85
   4 ?   -1.5   0.0       5.4   5.4e+03       7      23 ..     687     703 ..     683     703 .. 0.76
   5 ?   -1.1   0.0       3.9   3.8e+03       6      32 ..     720     745 ..     717     746 .. 0.86
   6 ?   -1.2   0.0       4.2   4.2e+03      14      33 .]     761     780 ..     754     780 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 7.5
                HHHHHHHHHHHH CS
       TPR_6 15 dtdkAlealerl 26
                + ++A ++++ +
  EPX74086.1 86 EDEEADRIYQTV 97
                5689******98 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.0043
                 HHHHHHHHHHHHHHHHH-TT CS
       TPR_6  13 lgdtdkAlealerlikeYPd 32 
                 lgd  kA+++l+++i+  P+
  EPX74086.1 258 LGDVKKARKLLQSVIETNPK 277
                 5899**************98 PP

  == domain 3  score: 8.3 bits;  conditional E-value: 0.0039
                 HHHH.HHHHHHHHHHHHHHHHH-TT CS
       TPR_6   9 syrk.lgdtdkAlealerlikeYPd 32 
                 s+++ lg+ d+Al++le+ +k +P+
  EPX74086.1 654 SLERvLGKLDEALALLEDALKIFPT 678
                 556667******************6 PP

  == domain 4  score: -1.5 bits;  conditional E-value: 5.4
                 HHHHHHHHHHHHHHHHH CS
       TPR_6   7 alsyrklgdtdkAleal 23 
                 ++ ++  gdt kA++a+
  EPX74086.1 687 GQILEDSGDTVKARDAF 703
                 55666657******998 PP

  == domain 5  score: -1.1 bits;  conditional E-value: 3.9
                 HHHHHHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6   6 lalsyrklgdtdkAlealerlikeYPd 32 
                 la++ +k  +  +A+  l+r   + P+
  EPX74086.1 720 LARLEEKE-NIVRARVVLDRAKVRNPK 745
                 78888888.999*******99999987 PP

  == domain 6  score: -1.2 bits;  conditional E-value: 4.2
                 HHHHHHHHHHHHHHHH-TT- CS
       TPR_6  14 gdtdkAlealerlikeYPdS 33 
                 g+t++ ++al + ++e P S
  EPX74086.1 761 GNTSQVKAALAKALQECPSS 780
                 78888899999999999987 PP

>> NRDE-2  NRDE-2, necessary for RNA interference
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.7   5.1     0.007       6.9       9     113 ..     271     385 ..     263     490 .. 0.51
   2 !    5.4   0.1    0.0084       8.4      44     112 ..     558     623 ..     532     640 .. 0.80
   3 ?    0.9   0.1       0.2     2e+02      15     106 ..     611     718 ..     603     730 .. 0.72
   4 !   14.7   1.1   1.2e-05     0.012      53     110 ..     735     789 ..     701     863 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.007
      NRDE-2   9 aveenPedidaWlelvefQdellsaeee.................slskserkalaeiklsilekAleknksn....pdserLllelLklgseiwdsek 86 
                  +e+nP+ ++ W++ +++ + + + +++                          +  i+l+ +++A    +++    p+s +L le  +l  +  ++  
  EPX74086.1 271 VIETNPKHASGWVAAARLEEVANK-NSQarililkgcdncprsedV-------WMEAIRLHPVDEAKVIIADAvrnlPHSVTLWLEAERLETQSSAK-- 359
                 556666666666666666663332.222356666665533332221.......23333333333332222221111155555554332222222222.. PP

      NRDE-2  87 lakeWeellkenpnsvkLWreyldfrq 113
                  ++  +++l++np+sv+LW+e ++ + 
  EPX74086.1 360 -KRIIKKALEHNPTSVGLWKEAVNLEE 385
                 .22334566666666666666555443 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.0084
      NRDE-2  44 kalaeiklsilekAleknksnpdserLllelLklgseiwdseklakeWeellkenpnsvkLWreyldfr 112
                 +  ++   silekA+e++   p+ e + l + k+ ++i d +  ++   +++  n+ns+++W + ++ +
  EPX74086.1 558 YGSTDTVSSILEKAIEAC---PKTELIWLVYAKERKNIGDVNGARNILGRAFDFNSNSEEIWLAAVKLE 623
                 445566669*********...99***************************************8776655 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.2
      NRDE-2  15 edidaWlelvefQdellsaeee.....................slskserkalaeiklsilekAleknksnpdserLllelLklgseiwdseklakeWe 92 
                 +  + Wl+ v++    +++e+e                     s+s ++    ++  l++le Al+     p+ ++  +   ++ ++  d+ k ++ + 
  EPX74086.1 611 NSEEIWLAAVKLEF--VNNEDEraekllarariesgseriwtkSISLERVLGKLDEALALLEDALKIF---PTYDKFWMMKGQILEDSGDTVKARDAFI 704
                 55566666666654..2222222445555566666666677655555556668888999999999999...8889999999999999999999999999 PP

      NRDE-2  93 ellkenpnsvkLWr 106
                    k++p+sv LW+
  EPX74086.1 705 TGTKHCPHSVALWI 718
                 99999999999997 PP

  == domain 4  score: 14.7 bits;  conditional E-value: 1.2e-05
      NRDE-2  53 ilekAleknksnpdserLllelLklgseiwdseklakeWeellkenpnsvkLWreyld 110
                 +l++A   n   p++e L le Lk+ ++i +++++++   ++l+e+p+s  LW e + 
  EPX74086.1 735 VLDRAKVRN---PKNELLWLEVLKMENRIGNTSQVKAALAKALQECPSSGLLWSEAIW 789
                 678888888...9****************************************99765 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0      0.21   2.1e+02       6      29 ..     257     280 ..     256     285 .. 0.89
   2 ?   -1.1   0.0       1.6   1.6e+03      19      35 ..     396     412 ..     377     414 .. 0.82
   3 ?   -0.5   0.0       1.1     1e+03       8      32 ..     593     617 ..     590     619 .. 0.91
   4 !   10.5   0.0   0.00036      0.36       7      39 ..     659     691 ..     655     694 .. 0.85
   5 ?    3.0   0.0     0.083        82       3      30 ..     820     847 ..     818     850 .. 0.82

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.21
      TPR_11   6 eqGkyeeAieaYkkAlkldPdnae 29 
                 ++G+ ++A + ++  ++ +P+ a+
  EPX74086.1 257 DLGDVKKARKLLQSVIETNPKHAS 280
                 79******************9876 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 1.6
      TPR_11  19 kAlkldPdnaeayynLG 35 
                 +A++l P + +++++L+
  EPX74086.1 396 RAVELIPMSIDLWLALA 412
                 89999999999999886 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 1.1
      TPR_11   8 GkyeeAieaYkkAlkldPdnaeayy 32 
                 G+ ++A + + +A ++++++ e+++
  EPX74086.1 593 GDVNGARNILGRAFDFNSNSEEIWL 617
                 889999999*************997 PP

  == domain 4  score: 10.5 bits;  conditional E-value: 0.00036
      TPR_11   7 qGkyeeAieaYkkAlkldPdnaeayynLGlayy 39 
                 +Gk++eA++ ++ Alk+ P++  ++   G+++ 
  EPX74086.1 659 LGKLDEALALLEDALKIFPTYDKFWMMKGQILE 691
                 7*******************9998877777765 PP

  == domain 5  score: 3.0 bits;  conditional E-value: 0.083
      TPR_11   3 ayyeqGkyeeAieaYkkAlkldPdnaea 30 
                 ++++  k +++ e++ kA++ d+dn ++
  EPX74086.1 820 MLHSESKPDKSREWFLKAIRADQDNGDV 847
                 566777779999************9776 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       3.1   3.1e+03      16      31 ..     258     273 ..     255     279 .. 0.69
   2 ?    1.6   0.1      0.33   3.3e+02      12      37 ..     410     435 ..     404     450 .. 0.82
   3 !    9.2   0.0    0.0014       1.4      13      33 ..     656     676 ..     645     703 .. 0.72
   4 ?    4.1   0.0     0.056        56      47      76 ..     813     842 ..     802     843 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 3.1
      TPR_12  16 lgrydeAlellekale 31 
                 lg+  +A++ll+ ++e
  EPX74086.1 258 LGDVKKARKLLQSVIE 273
                 6777777777776655 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.33
      TPR_12  12 vlrrlgrydeAlellekaleiarrll 37 
                 +l+rl+ y  A++ l+ka++ +r ++
  EPX74086.1 410 ALARLETYKNAQKVLNKARQTIRTSH 435
                 67899999999999999999987664 PP

  == domain 3  score: 9.2 bits;  conditional E-value: 0.0014
      TPR_12  13 lrrlgrydeAlellekaleia 33 
                 +r lg++deAl+lle al i+
  EPX74086.1 656 ERVLGKLDEALALLEDALKIF 676
                 556777777777777777766 PP

  == domain 4  score: 4.1 bits;  conditional E-value: 0.056
      TPR_12  47 tlrnLgrlyralgryeeAlelleealaiae 76 
                  l++++r+++   ++++ +e++ +a+++++
  EPX74086.1 813 LLCTIARMLHSESKPDKSREWFLKAIRADQ 842
                 578899999888899999999999998765 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0      0.14   1.4e+02      36      79 ..     258     302 ..     256     305 .. 0.86
   2 !    6.9   0.0    0.0076       7.5      31      71 ..     409     450 ..     406     458 .. 0.87
   3 ?   -1.6   0.0       3.4   3.4e+03      43      81 ..     565     604 ..     559     605 .. 0.83
   4 ?    3.6   0.0     0.076        76      34      81 ..     624     671 ..     593     672 .. 0.69

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.14
                 TT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH CS
      ANAPC3  36 ngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaL 79 
                 +g+ k+A +ll++  ++n+k+   ++ +A+     +k  +A+ ++
  EPX74086.1 258 LGDVKKARKLLQSViETNPKHASGWVAAARLEEVANKNSQARILI 302
                 699*******************99999999888888888887665 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0076
                 HHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT- CS
      ANAPC3  31 lclylngqykrAyellrka.klnskslgcrylfAqcllkLkk 71 
                 l+l +++ yk A+++l+ka ++  +s+++++ +A+   ++++
  EPX74086.1 409 LALARLETYKNAQKVLNKArQTIRTSHEVWIAAARLEEQQGN 450
                 56778999***********99999*********998877776 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 3.4
                 HHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH-S CS
      ANAPC3  43 yellrka.klnskslgcrylfAqcllkLkkyeeAiaaLek 81 
                   +l+ka +  +k++ +++++A+    ++ ++ A+++L++
  EPX74086.1 565 SSILEKAiEACPKTELIWLVYAKERKNIGDVNGARNILGR 604
                 6789999999999999******988888888888888876 PP

  == domain 4  score: 3.6 bits;  conditional E-value: 0.076
                 HHTT-HHHHHHHHHCTSHHHC-HHHHHHHHHHHH.HTT-HHHHHHHH-S CS
      ANAPC3  34 ylngqykrAyellrkaklnskslgcrylfAqcll.kLkkyeeAiaaLek 81 
                 + n++ +rA +ll +a+++s s++++  +  +l   L+k++eA+a+Le 
  EPX74086.1 624 FVNNEDERAEKLLARARIESGSERIWT-KSISLErVLGKLDEALALLED 671
                 567778899999999977777775543.334443488*********996 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.55   5.5e+02      13      31 ..     256     274 ..     255     275 .. 0.89
   2 ?    0.7   0.0      0.53   5.3e+02      15      28 ..     374     387 ..     372     394 .. 0.82
   3 ?   -2.5   0.0       5.5   5.5e+03      16      28 ..     593     605 ..     591     607 .. 0.83
   4 !    8.3   0.1    0.0022       2.2      15      31 ..     659     675 ..     655     675 .. 0.91
   5 ?   -0.5   0.0       1.3   1.3e+03       8      30 ..     817     839 ..     814     842 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.55
      TPR_10  13 rqrgrydeAealleealai 31 
                 +++g+ ++A++ll+ ++++
  EPX74086.1 256 TDLGDVKKARKLLQSVIET 274
                 589***********99986 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.53
      TPR_10  15 rgrydeAealleea 28 
                 +g ++eA++l ee+
  EPX74086.1 374 VGLWKEAVNLEEEV 387
                 67899*****9998 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 5.5
      TPR_10  16 grydeAealleea 28 
                 g+ ++A+++l +a
  EPX74086.1 593 GDVNGARNILGRA 605
                 88999**999888 PP

  == domain 4  score: 8.3 bits;  conditional E-value: 0.0022
      TPR_10  15 rgrydeAealleealai 31 
                 +g++deA+alle+al i
  EPX74086.1 659 LGKLDEALALLEDALKI 675
                 79************986 PP

  == domain 5  score: -0.5 bits;  conditional E-value: 1.3
      TPR_10   8 LanalrqrgrydeAealleeala 30 
                 +a++l++  + d++++++ +a++
  EPX74086.1 817 IARMLHSESKPDKSREWFLKAIR 839
                 799999999************97 PP

>> TPR_21  Tetratricopeptide repeat-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.2      0.47   4.7e+02      35      68 ..      86     118 ..      83     137 .. 0.69
   2 !    9.0   0.1    0.0011       1.1      84     127 ..     253     296 ..     236     299 .. 0.87
   3 ?   -2.2   0.1       2.8   2.8e+03     116     154 ..     411     450 ..     406     460 .. 0.59
   4 ?    4.0   0.0     0.035        35      76     132 ..     579     635 ..     550     653 .. 0.82
   5 !    6.2   0.1    0.0074       7.4     126     175 ..     659     709 ..     617     725 .. 0.72

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.47
      TPR_21  35 qaeeAsalYqqlqeaveakdaakakeaaeelade 68 
                 + eeA  +Yq++++++++  ++  +e  e+l+ e
  EPX74086.1  86 EDEEADRIYQTVEDNLSKRRKT-QRERQEQLQRE 118
                 57899********988866555.34444454443 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0011
      TPR_21  84 kaaveagdlaaAkaqLewvlekakdeelkalarlRLarvllaek 127
                 +++ + gd+++A++ L++v+e +++++   +a  RL +v  ++ 
  EPX74086.1 253 RNNTDLGDVKKARKLLQSVIETNPKHASGWVAAARLEEVANKNS 296
                 678889******************************99987665 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 2.8
      TPR_21 116 rlRLarvllaekkydeAlktLeakkeeafa.alvaelrGD 154
                   RL     a+k +++A +t+ +++e   a a+ +e +G+
  EPX74086.1 411 LARLETYKNAQKVLNKARQTIRTSHEVWIAaARLEEQQGN 450
                 4555556666666666666666665544431344555555 PP

  == domain 4  score: 4.0 bits;  conditional E-value: 0.035
      TPR_21  76 alaaLllAkaaveagdlaaAkaqLewvlekakdeelkalarlRLarvllaekkydeA 132
                 +l  L+ Ak+  + gd++ A++ L ++ + +++ e   la ++L  v  +++ +++ 
  EPX74086.1 579 ELIWLVYAKERKNIGDVNGARNILGRAFDFNSNSEEIWLAAVKLEFVNNEDERAEKL 635
                 78899******************************99******99998888877764 PP

  == domain 5  score: 6.2 bits;  conditional E-value: 0.0074
      TPR_21 126 ekkydeAlktLeakke.eafaalvaelrGDilvaqgkldeAraaYqaAlaa 175
                  +k+deAl++Le++ +      ++  ++G il   g++ +Ar+a+  + ++
  EPX74086.1 659 LGKLDEALALLEDALKiFPTYDKFWMMKGQILEDSGDTVKARDAFITGTKH 709
                 4899*******876552233457889******************9777665 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0      0.42   4.2e+02      10      41 ..     260     291 ..     257     316 .. 0.78
   2 ?   -3.1   0.0       8.9   8.9e+03      29      46 ..     435     452 ..     432     453 .. 0.81
   3 !    7.1   0.0    0.0062       6.1      11      72 ..     662     723 ..     658     724 .. 0.91
   4 ?    4.6   0.0     0.036        36       2      62 ..     720     780 ..     719     800 .. 0.93

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.42
       TPR_9  10 dweralavverllllaPddpeerrdRGlllaq 41 
                 d  +a + +++++  +P++++ +   ++l++ 
  EPX74086.1 260 DVKKARKLLQSVIETNPKHASGWVAAARLEEV 291
                 56678888888899999999999988888765 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 8.9
       TPR_9  29 peerrdRGlllaqlGcls 46 
                 +e +   ++l++q+G++s
  EPX74086.1 435 HEVWIAAARLEEQQGNVS 452
                 566888999****99976 PP

  == domain 3  score: 7.1 bits;  conditional E-value: 0.0062
       TPR_9  11 weralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapdapdaeairaqL 72 
                  ++ala +e  l ++P     ++  G++l+ +G++ +A++++ +   ++p+  +   + a+L
  EPX74086.1 662 LDEALALLEDALKIFPTYDKFWMMKGQILEDSGDTVKARDAFITGTKHCPHSVALWILLARL 723
                 6889999999********9*******************************998877777776 PP

  == domain 4  score: 4.6 bits;  conditional E-value: 0.036
       TPR_9   2 kaiaireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapda 62 
                  a++ ++e+  ra  v++r  + +P+   ++++   ++ + G++s+  a+L  +l+ +p+ 
  EPX74086.1 720 LARLEEKENIVRARVVLDRAKVRNPKNELLWLEVLKMENRIGNTSQVKAALAKALQECPSS 780
                 57899999***************************************************75 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (907 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       991  (0.0552736); expected 358.6 (0.02)
Passed bias filter:                      526  (0.0293379); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.80u 0.29s 00:00:01.09 Elapsed: 00:00:00.46
# Mc/sec: 5954.85
//
Query:       EPX74087.1  [L=774]
Description: ubiquitin carboxy terminal hydrolase Ubp14 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-37  127.8   0.1    9.7e-37  126.8   0.0    1.5  2  UCH         Ubiquitin carboxyl-terminal hydrolase
      1e-23   82.8   2.4    8.6e-11   41.5   1.7    2.4  2  UBA         UBA/TS-N domain
      5e-22   78.0  21.5    1.7e-18   66.7   3.4    3.6  4  zf-UBP      Zn-finger in ubiquitin-hydrolases and other prote
    1.7e-21   75.8   8.7      1e-20   73.2   1.3    3.0  3  zf-UBP_var  Variant UBP zinc finger
    1.2e-19   71.1   0.0    1.5e-18   67.5   0.0    2.3  1  UCH_1       Ubiquitin carboxyl-terminal hydrolase
     0.0025   17.6   0.8      0.013   15.3   0.0    2.4  2  UBA_4       UBA-like domain
  ------ inclusion threshold ------
      0.045   13.8   0.2       0.11   12.5   0.2    1.6  1  HOIP-UBA    HOIP UBA domain pair
      0.049   13.9   0.6      0.049   13.9   0.6    3.1  4  CTU2        Cytoplasmic tRNA 2-thiolation protein 2
      0.056   13.2   1.9       0.82    9.4   0.0    3.1  3  CUE         CUE domain
      0.096   13.0   0.0       0.29   11.5   0.0    1.8  1  HBS1_N      HBS1 N-terminus


Domain annotation for each model (and alignments):
>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       3.6   6.4e+03      98     143 ..      32      76 ..      25     171 .. 0.71
   2 !  126.8   0.0   5.4e-40   9.7e-37       1     255 [.     300     767 ..     300     769 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 3.6
                 CEHHHHHHHHHHHHHHHHCCHCCCHHHHHHCCCTTSHHHHHH-EEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH  98 qDaqEflaflLdqlhedlnrevaeekwkkhlkrndslitdlfegql 143
                 qD++  +  +L+ +++ +   +++++ k h+ r++ +i+ + + +l
  EPX74087.1  32 QDSETGIDLCLACFESGCGP-NEHNHSKIHCDRKQHPIVLNIRRKL 76 
                 66666677777777777766.4555557777777777665555444 PP

  == domain 2  score: 126.8 bits;  conditional E-value: 5.4e-40
                 -EES-SSSTHHHHHHHHHHHTSHHHHHHHHTCHHCCSSTCCCCC-.TT.TTS.TTHHHHHHHHHHHHHH....................SH-CCEE--H CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....................xxxxxxxxxx RF
         UCH   1 tGlsNlGntCymnsvlQcLfsipelrdyllsleevkkesrnkkelnesnplgkkgelakalkdlfkell....................kskskavsPk 79 
                 tGl+NlGn+Cy+ s++Q+Lfsi+e++d+ l++ ++++ + ++ ++n          + ++l++l + l                        +  + P 
  EPX74087.1 300 TGLKNLGNSCYLASTMQALFSIKEFADFELDMFNTCNPRCDHPTSN----------FQCQLSKLAEGLCsgkfskpsglvrqttdsspmLPFQDGLRPY 388
                 7**********************99999888666665555554444..........667777777666655555555544433333333224559999* PP

                 HHHHHHHHHSGGGTSSSTCEHHHHHHHHHHHHHHHHCCHCCCHHHHHHCCCTTSHHHHHH-EEEEE................................. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................................. RF
         UCH  80 klkktlsklaksfsgykqqDaqEflaflLdqlhedlnrevaeekwkkhlkrndslitdlfegqlks................................. 145
                 ++k ++++ +++f + +qqDa Efl +lL+ + +++                +  i++lf + +++                                 
  EPX74087.1 389 MFKDVMGQDHPEFGTAQQQDAYEFLVYLLSVIRRNSIG--------------NRDISTLFDFDVEQkllclsckrarysvftsqgltipvprkkigeen 473
                 **********************************9999..............4668999999999999999999999999******************* PP

                 ......................................EEEEEEB-SEEEEEEESEEETEE.EEE--SEEB--S..EEE-GGGBSS-BTTS-TCS-B.. CS
                 ......................................xxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxx.. RF
         UCH 146 ......................................klklkrlPeiLiihlkRfsynss.ksKlntkvefpe..eldlssylaeekkkkteekkk.. 201
                                                        l+lk++P++L ++l+Rf ++    +Kl  +v++ e    +l++++a+   + +e  ++  
  EPX74087.1 474 gegvyeevtlnecldlavqpdsmeytceackskqgattCLSLKTFPKVLALQLNRFDIQAFqVKKLGIPVKVSEegLYKLDNLVAKPRPEGEELLPEaa 572
                 *************************************99*******************99999999999999986656777778877777777666688 PP

                 ................................................................................................... CS
                 ................................................................................................... RF
         UCH 202 ................................................................................................... 201
                                                                                                                    
  EPX74087.1 573 pminwneqaieqlqamgfpiarcqramlatnnadaetamnwlfehmedptidnpidvselrqaksdtvpndkvqslcdfgfseaqakraltetnndver 671
                 888888888888899999999999999999999999999999999999999999999****************************************** PP

                 .......................................EEEEEEEEEES.CTTSEEEEEEEECTTTTE..EEEEETTEEEEE-HHCCCTTCEEEE CS
                 .......................................xxxxxxxxxxx.xxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH 202 .......................................YeLiavvvHsG.slssGHYvayiknekngk..WykydDetvkevkeeeevlssayiL 255
                                                        Y+L a+++H+G s++ GHYva+i++e +g+  W+ ++De++ + ++ ee + ++y++
  EPX74087.1 672 avdwilnhpdekfdetaseaeksmevekvkhdtdslpanYQLKAIISHKGgSAHAGHYVAFIRKEIEGQsvWVLFNDEKILKASSLEEAKATGYVY 767
                 ***************************************************************88777799*********9999766767788886 PP

>> UBA  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.5   1.7   4.8e-14   8.6e-11       2      37 .]     578     614 ..     578     614 .. 0.99
   2 !   39.7   0.0   1.8e-13   3.2e-10       3      37 .]     642     676 ..     640     676 .. 0.96

  Alignments for each domain:
  == domain 1  score: 41.5 bits;  conditional E-value: 4.8e-14
                 CHHHHHHHHHTTS-HHHHHHHHHHTTT.SHHHHHHHH CS
         UBA   2 deeaiqrLveMGFdreevveALratgn.NeErAveyL 37 
                 +e+ai++L++MGF+ +++++A  at+n + E+A+++L
  EPX74087.1 578 NEQAIEQLQAMGFPIARCQRAMLATNNaDAETAMNWL 614
                 89**********************************9 PP

  == domain 2  score: 39.7 bits;  conditional E-value: 1.8e-13
                 HHHHHHHHHTTS-HHHHHHHHHHTTTSHHHHHHHH CS
         UBA   3 eeaiqrLveMGFdreevveALratgnNeErAveyL 37 
                 ++++q L++ GF+++++++AL  t+n++ErAv+++
  EPX74087.1 642 NDKVQSLCDFGFSEAQAKRALTETNNDVERAVDWI 676
                 789*******************************8 PP

>> zf-UBP  Zn-finger in ubiquitin-hydrolases and other protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   3.0   8.5e-08   0.00015      11      46 ..      38      73 ..      23      76 .. 0.85
   2 ?   -2.9   0.0       5.1   9.1e+03      17      30 ..     153     166 ..     144     167 .. 0.84
   3 !   66.7   3.4   9.3e-22   1.7e-18       1      62 [.     174     246 ..     174     248 .. 0.96
   4 ?   -3.9   0.2        10   1.8e+04      13      18 ..     443     448 ..     441     450 .. 0.80

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 8.5e-08
                EEEETTT--EEE-TTTT-HHHHHHHHH---EEEETT CS
      zf-UBP 11 lWlCLkCghvgCgrksnghalkHyeetrHplavdls 46
                + lCL C   gCg ++++h++ H+  ++Hp++++++
  EPX74087.1 38 IDLCLACFESGCGPNEHNHSKIHCDRKQHPIVLNIR 73
                558*****************************9986 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 5.1
                 T--EEE-TTTT-HH CS
      zf-UBP  17 CghvgCgrksngha 30 
                 C h +C + + +h+
  EPX74087.1 153 CEHTLCLNPQADHI 166
                 99999998777875 PP

  == domain 3  score: 66.7 bits;  conditional E-value: 9.3e-22
                 -TTTH--.SSEEEETTT--EEE-TTT......T-HHHHHHHHH---EEEETTT--......EEETTTTEEBE-G CS
      zf-UBP   1 CseCnsenknlWlCLkCghvgCgrks......nghalkHyeetrHplavdlstls......vycyscddevedk 62 
                 C  C+ + +nlW+C++Cg  +Cgrk+      ngha++H+++++H++ v+l++++      +ycyscd+e  d+
  EPX74087.1 174 CFGCDLK-DNLWMCMHCGILSCGRKQygggggNGHAIEHFKNSKHAVSVKLKSITpdghadIYCYSCDEERIDP 246
                 889**99.9************************************************************98776 PP

  == domain 4  score: -3.9 bits;  conditional E-value: 10
                 EETTT- CS
      zf-UBP  13 lCLkCg 18 
                 lCL+C 
  EPX74087.1 443 LCLSCK 448
                 799996 PP

>> zf-UBP_var  Variant UBP zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.2   1.3   5.7e-24     1e-20       1      64 []      11      78 ..      11      78 .. 0.97
   2 !    6.5   0.1    0.0038       6.7      37      60 ..     202     225 ..     176     228 .. 0.81
   3 ?   -3.7   0.1       5.8     1e+04      17      33 ..     498     514 ..     498     515 .. 0.85

  Alignments for each domain:
  == domain 1  score: 73.2 bits;  conditional E-value: 5.7e-24
  zf-UBP_var  1 vrvpsssdkVyKdECvycFdtpesedGlyvcLkcFlgfck....khaekhaektghpvylnikrtkke 64
                v +p+  ++Vy++ECv+cF +++se+G++ cL cF+++c     +h++ h+ +++hp++lni+r+ k+
  EPX74087.1 11 VSIPNGYQTVYREECVRCFVSQDSETGIDLCLACFESGCGpnehNHSKIHCDRKQHPIVLNIRRKLKP 78
                689*************************************9***********************9886 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0038
  zf-UBP_var  37 gfckkhaekhaektghpvylnikr 60 
                 g+++ ha +h+++++h+v +++k 
  EPX74087.1 202 GGGNGHAIEHFKNSKHAVSVKLKS 225
                 44559***************9996 PP

  == domain 3  score: -3.7 bits;  conditional E-value: 5.8
  zf-UBP_var  17 ycFdtpesedGlyvcLk 33 
                 y+++ ++s++G   cL+
  EPX74087.1 498 YTCEACKSKQGATTCLS 514
                 678889999**999995 PP

>> UCH_1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.5   0.0   8.1e-22   1.5e-18      51     319 ..     329     750 ..     300     751 .. 0.77

  Alignments for each domain:
  == domain 1  score: 67.5 bits;  conditional E-value: 8.1e-22
                 xxxxxxxxxx.xxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxx...................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1  51 fdmldkakgl.ncqasnFlralssipe.......asalglileeeeete...................kssaislssliqsfnrflldqlekelketkk 122
                 +dm ++ + + +  +snF+ +ls++ e        +  gl+++  ++ +                   ++ ++  +  +q   +fl+  l+   +++  
  EPX74087.1 329 LDMFNTCNPRcDHPTSNFQCQLSKLAEglcsgkfSKPSGLVRQTTDS-SpmlpfqdglrpymfkdvmgQDHPEFGTAQQQDAYEFLVYLLSVIRRNS-- 424
                 47777777555777889999999777766666667888888665322.2344444444444444444322222222223344444444444444333.. PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...x....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 123 nsseeesaieqllgtkaettirclkCgseksrksstlvldlkyP...k....psnekkeakvtfasilksslerekttrawCekCkryqpteqrktvkn 214
                      + +i++l+ +++e+++ cl+C+  + r s++ +  l+ P   k    ++ e   ++vt++++l   ++  ++++++Ce Ck++q  ++  ++k 
  EPX74087.1 425 ---IGNRDISTLFDFDVEQKLLCLSCK--RARYSVFTSQGLTIPvprKkigeENGEGVYEEVTLNECLDLAVQP-DSMEYTCEACKSKQGATTCLSLKT 517
                 ...34567999*************996..567888888888887534367665555888899**********99.8999******************** PP

                 xxxxxxxxxxxxxxxxxxxxxx............................................................................. RF
       UCH_1 215 lPpvLalnakleeeeelelwkt............................................................................. 236
                 +P+vLal++++++ +++++ k                                                                              
  EPX74087.1 518 FPKVLALQLNRFDIQAFQVKKLgipvkvseeglykldnlvakprpegeellpeaapminwneqaieqlqamgfpiarcqramlatnnadaetamnwlfe 616
                 **********975553444333889999999******************************************************************** PP

                 ........................................................xxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 237 ........................................................knwlpleiklsldedknl.eeklkeerekakaekeikvYeLqs 278
                                                                          +w+ ++ + + de  ++ e++ + e+ k+++++  + Y+L +
  EPX74087.1 617 hmedptidnpidvselrqaksdtvpndkvqslcdfgfseaqakraltetnndveraVDWILNHPDEKFDETASEaEKSMEVEKVKHDTDSLPANYQLKA 715
                 ***9999999999999999999999999999998888888888888887666666545555444444444443377888888888999999******** PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 279 vvvhigdskesghLvslvkvaekelerdppesqWylFNDfl 319
                 ++ h g s ++gh+v++++   ke    + +s W+lFND +
  EPX74087.1 716 IISHKGGSAHAGHYVAFIR---KEI---EGQSVWVLFNDEK 750
                 ******9999*********...443...3779*******66 PP

>> UBA_4  UBA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.1      0.58     1e+03      20      42 ..     598     620 ..     597     621 .. 0.83
   2 !   15.3   0.0   7.2e-06     0.013      12      40 ..     652     680 ..     643     683 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.58
       UBA_4  20 qlLeannWdLerAislyFdsgea 42 
                  +L  nn d e+A++  F++ e+
  EPX74087.1 598 AMLATNNADAETAMNWLFEHMED 620
                 689999*******9988888766 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 7.2e-06
       UBA_4  12 GadeekArqlLeannWdLerAislyFdsg 40 
                 G++e++A++ L+ +n+d+erA++  ++++
  EPX74087.1 652 GFSEAQAKRALTETNNDVERAVDWILNHP 680
                 78********************9777665 PP

>> HOIP-UBA  HOIP UBA domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.2   5.9e-05      0.11      38     112 ..     609     692 ..     579     704 .. 0.67

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 5.9e-05
    HOIP-UBA  38 npldWLktelpe.lldevaalaaseqkekke......nevgk..lsraEakealleagGdvekAvkqclreRrkKvkelaslgf 112
                 ++++WL +++++  +d+ +  +  +q+++++      +++    +s+a ak+al e++ dve+Av  +l++  +K++e as   
  EPX74087.1 609 TAMNWLFEHMEDpTIDNPIDVSELRQAKSDTvpndkvQSLCDfgFSEAQAKRALTETNNDVERAVDWILNHPDEKFDETASEAE 692
                 6666666666543455555544444444433454333222222269999**************************999887644 PP

>> CTU2  Cytoplasmic tRNA 2-thiolation protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.6   2.7e-05     0.049      18     111 ..      78     178 ..      69     179 .. 0.72
   2 ?   -0.9   0.0       1.1   1.9e+03     101     111 ..     230     240 ..     205     281 .. 0.75
   3 ?   -3.8   0.0       8.3   1.5e+04     103     111 ..     440     448 ..     421     449 .. 0.74
   4 ?   -2.8   0.1       4.2   7.5e+03      76      76 ..     674     674 ..     631     707 .. 0.44

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 2.7e-05
        CTU2  18 pstvstvvrTgeKLvknksseeae..letsekCalCglplddkakewkrtitiselseteseeekeelekakeeeeeeaeeeelaeee.......eeLC 107
                 p+t +  +r ++KL+ +++see+   +  + +C++C+++ld ++   ++++++ + ++++s+++  +++++++e   ++++  l+ +        ++ C
  EPX74087.1  78 PETCEEPLRKVTKLEIREESEEDIydWFYQPHCLICKINLDIQQPLLSASFEAVTKAPKASNKS--QVKAWENEIVPCEHTLCLNPQAdhipdlkDTKC 174
                 55666667889999999887665477999***********888888999999999998888877..455555554444433333333345677878889 PP

        CTU2 108 YgCl 111
                 +gC 
  EPX74087.1 175 FGCD 178
                 9996 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 1.1
        CTU2 101 eeeeeLCYgCl 111
                  + +  CY+C 
  EPX74087.1 230 GHADIYCYSCD 240
                 34466788884 PP

  == domain 3  score: -3.8 bits;  conditional E-value: 8.3
        CTU2 103 eeeLCYgCl 111
                 ++ LC +C+
  EPX74087.1 440 QKLLCLSCK 448
                 367899996 PP

  == domain 4  score: -2.8 bits;  conditional E-value: 4.2
        CTU2  76 s 76 
                 +
  EPX74087.1 674 D 674
                 1 PP

>> CUE  CUE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.3      0.44   7.9e+02       1      11 [.     578     588 ..     578     588 .. 0.91
   2 ?    0.6   0.0      0.26   4.6e+02      21      38 ..     597     614 ..     597     616 .. 0.83
   3 ?    9.4   0.0   0.00046      0.82      15      39 ..     653     677 ..     652     678 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.44
                 CHHHHHHHHHH CS
         CUE   1 reqmletLkem 11 
                 +eq++e+L+ m
  EPX74087.1 578 NEQAIEQLQAM 588
                 689******99 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.26
                 HHHHHHCTTTHHHHHHHH CS
         CUE  21 ravLrasngnvEatinaL 38 
                 ra L  +n + E+++n L
  EPX74087.1 597 RAMLATNNADAETAMNWL 614
                 578999*********965 PP

  == domain 3  score: 9.4 bits;  conditional E-value: 0.00046
                 S-HHHHHHHHHHCTTTHHHHHHHHH CS
         CUE  15 ldeevIravLrasngnvEatinaLL 39 
                 ++e + +++L ++n++vE++++ +L
  EPX74087.1 653 FSEAQAKRALTETNNDVERAVDWIL 677
                 5778899**************9655 PP

>> HBS1_N  HBS1 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00016      0.29      46      71 ..     654     679 ..     643     683 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00016
      HBS1_N  46 tekqikeAlwkyyyDvekaldyllnk 71 
                 +e+q k Al + + Dve a+d++ln 
  EPX74087.1 654 SEAQAKRALTETNNDVERAVDWILNH 679
                 799*********************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (774 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       789  (0.0440069); expected 358.6 (0.02)
Passed bias filter:                      521  (0.0290591); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.65u 0.28s 00:00:00.93 Elapsed: 00:00:00.44
# Mc/sec: 5339.21
//
Query:       EPX74088.1  [L=651]
Description: ubiquitin-like conjugating enzyme Atg7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.3e-69  233.8   1.7    5.8e-69  233.0   1.7    1.4  1  ATG7_N        Ubiquitin-like modifier-activating enzyme ATG7 
    1.8e-43  148.7   0.0    3.6e-43  147.7   0.0    1.4  1  ThiF          ThiF family
  ------ inclusion threshold ------
      0.047   13.8   0.0       0.19   11.8   0.0    2.0  2  Shikimate_DH  Shikimate / quinate 5-dehydrogenase
       0.17   11.6   0.0       0.49   10.0   0.0    1.8  2  ApbA          Ketopantoate reductase PanE/ApbA


Domain annotation for each model (and alignments):
>> ATG7_N  Ubiquitin-like modifier-activating enzyme ATG7 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  233.0   1.7   1.3e-72   5.8e-69       1     299 [.       9     304 ..       9     305 .. 0.90

  Alignments for each domain:
  == domain 1  score: 233.0 bits;  conditional E-value: 1.3e-72
                 ---B---EEE-HHHHHHHHHHHHHTTTT----EEEEEEE-S--CTTB---EEE.-GGGS------BTTBEEEEEEEEEESSHHHHHCS-CHHHHHHHHH CS
      ATG7_N   1 LqFapfssaielsFwhelaslKldelkLddsarpilglyelrdaselssrlsl.dassletsdevpkgevraeGtlknfNTieeFknldkkallkeaak 98 
                 LqF+ f+s++++ Fwh+l+++K+++ kLd s++ i+g +++ ++s     +s+  +++    ++++ +e+ aeGtl+n NT +eF ++d k+l ++++k
  EPX74088.1   9 LQFQSFHSSVDAIFWHQLSNHKVEQQKLDASPVAIHGRFNAYSRS----AISIvFGKAS---ENSTIKECIAEGTLINANTQQEFVEADVKKLRESMGK 100
                 8***************************************99333....3333034444...556799******************************* PP

                 HHHHHHHTTHHHH-GGGTT-EEEEEEEETTTTEEEEEEEEEEEE-SS--EEEE.EEEHHHHS-HHHHHHHHHHHHHHHHSTTTTT--EEEEEEETTS-E CS
      ATG7_N  99 kiweaiksgkaledpslLssflllsFADLKkykFyYwfafPalklskpawvlseeksaseelsekeleslveavqklrkssderqegfflvkksreeel 197
                 k++e+i+ +++ e+p++L +fll+s+AD+K+y+++Yw+ fP+l +++p w ++++++a++ + ++ +     ++ ++ k+sd +q++ff+v k+ + ++
  EPX74088.1 101 KLLESIEMDTVAEKPNELIQFLLFSYADIKSYRYHYWCLFPSL-KNTPFWIVKSSHPAESVIPSNVV---LPKILDFLKTSDYTQRPFFIVTKDLKAQW 195
                 *******************************************.6********88888888888775...45666777778888999************ PP

                 EEE-GGGHHHH-STTEEEEEEEE-----TTS-BTTHHHHHHHHHHHH--SEEEEEEE-EET.TEE-TT.TSEEEEEE..........--EEEEE--B.T CS
      ATG7_N 198 eiaslseleeededeedvyvgfvDpssleenpGWpLRNlLvllrarwklkkvkvlcyRdskasakreeerSlvlelk..........lpkavGWernek 286
                  + +l+el ++ +d+ d ++   D+ +l+e+p+Wp RNlL++l+ +++l+k k++ +Rd  +  +++ +rS++l+l           l ++vGWern  
  EPX74088.1 196 VVLPLKELPRCISDKLDFFIFAEDSFQLQEYPSWPTRNLLAYLSIKHHLEKTKIIIFRDGIT--SNNLSRSVFLDLVsrksqdsskqL-STVGWERNGM 291
                 ************************************************************65..67788*******976666666533.55******** PP

                 TBS--EEEE-TTT CS
      ATG7_N 287 gklgprlvdLsel 299
                 g+lgp++v+Ls+l
  EPX74088.1 292 GQLGPKVVNLSSL 304
                 **********985 PP

>> ThiF  ThiF family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.7   0.0     8e-47   3.6e-43      16     243 ..     335     592 ..     318     593 .. 0.91

  Alignments for each domain:
  == domain 1  score: 147.7 bits;  conditional E-value: 8e-47
                 HHTSEEEEE--SHHHHHHHHHHHHHTTTEEEEEESSB--GGGGGTBTTS-GGGT..TSBHHHHHHHHHHHT-TTSEEEEEES-C............... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxx............... RF
        ThiF  16 LrdskvllvGaGglGsellknLalsGvgkltlvDnDkielsNlnRqflfreedi..GkpKaevaaealqeinpdveveavteri............... 97 
                 ++++k+ll+GaG+lG+ +++nL+ +Gv+++t+vD  ++ +sN++Rq lf++ed+  ++pKa++aa +l+ei+p++  e +  +i               
  EPX74088.1 335 IQSTKCLLLGAGTLGCGVARNLVSWGVRHITFVDYSNVAYSNPVRQSLFTFEDCkkKQPKAQCAASRLKEIYPKMFTEGHSISIpmlghpiyesdiekt 433
                 7899**************************************************66667**********************************999874 PP

                 .CG.CCS-HHHHTT-SEEEEESSSHHHHHHHHHHHHHHT-EEEEEEEETTEEEEEEE.EE.....CCS-ECTSS-T....GGS.EECCCCEEHHHHHHC CS
                 .xx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xx.....xxxxxxxxxxx....xxxxxxxxxxxxxxxxxxx RF
        ThiF  98 .td.etvleellesvDlVvdalDniearrlvnracvkkgiplieagtlgfegqvvvi.ip.....gktgcyeCldp....sstedptekkvplctsiag 184
                   d ++ le l++s+D++++ +D++e+r+l+  ++ +  + li+ ++lgf++ vv++  +     ++ gcy+C+d+    +s  d+t ++ +++     
  EPX74088.1 434 kRDyQK-LETLFSSHDAIFLLTDTRESRWLPTVMATSMNKILIN-SALGFDSWVVMRhGSlsqgeNRLGCYFCNDVfapsNSVVDRTLDQTCTV----- 525
                 433233.89***********************************.************52266788**********7777899999999999999..... PP

                 TE-B-HHHHHHHHHHHHHHHHHHH............TTBCGGGCCEEEECCTTTTEEEEECCEEEEEEC-T CS
                 xxxxxxxxxxxxxxxxxxxxxxxx............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        ThiF 185 nipaiatttavvaglaalellkll............sgkeklenslltqvdllesrfenvelerakkskcl 243
                     +++ ++ +a ++a+el  +l            + +++  ++l++q++++++ f+ +++  ++ ++c 
  EPX74088.1 526 ----TRAGCTNIATAIAVELFVSLlqhpngvaapvsNTETTVLGELPHQIRGFLHDFSLLKISGKAYQQCS 592
                 ....8999************99999**********9889999****************9999888777775 PP

>> Shikimate_DH  Shikimate / quinate 5-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   4.2e-05      0.19      10      42 ..     335     367 ..     328     372 .. 0.89
   2 ?   -3.6   0.0       2.4   1.1e+04      63      86 ..     434     457 ..     429     471 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 4.2e-05
                   .TT-EEEEES-SHHHHHHHHHHHCCT-CEEEEE CS
  Shikimate_DH  10 lkekkvlliGaGemaelvakhLlakgvkkvvva 42 
                   +++ k ll+GaG ++  va++L++ gv++++ +
    EPX74088.1 335 IQSTKCLLLGAGTLGCGVARNLVSWGVRHITFV 367
                   67899***********************99865 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 2.4
                   EEEGCGHHHHHHT-SEEEE-SSSS CS
  Shikimate_DH  63 alkleelkellaeadvvisatase 86 
                    +++++l++l ++ d ++  t ++
    EPX74088.1 434 KRDYQKLETLFSSHDAIFLLTDTR 457
                   456788888888888888777665 PP

>> ApbA  Ketopantoate reductase PanE/ApbA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.4   6.1e+03      87     106 ..     239     257 ..     230     265 .. 0.78
   2 ?   10.0   0.0   0.00011      0.49       3      52 ..     342     395 ..     340     418 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.4
                 HHGGGECTCEEEEEESSSSC CS
        ApbA  87 eikplldpntvvlllqNGlg 106
                 +ik++l++ t+++++  G+ 
  EPX74088.1 239 SIKHHLEK-TKIIIFRDGIT 257
                 58888988.58888888876 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00011
                 EES-SHHHHHHHHHHHH.HTHCEEEE-SCH.HHHH.HHHHCEEEEETT.CEEEE CS
        ApbA   3 ilGaGaiGsllaakLak.agadvtlilrsr.rlea.lkknGlrltseg.geeil 52 
                  lGaG +G+ +a +L     +++t+++ s+  + + +++  +++++++ ++ ++
  EPX74088.1 342 LLGAGTLGCGVARNLVSwGVRHITFVDYSNvAYSNpVRQSLFTFEDCKkKQPKA 395
                 79***************89999*********99999********9999544443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (651 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       657  (0.0366445); expected 358.6 (0.02)
Passed bias filter:                      557  (0.031067); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.65u 0.29s 00:00:00.94 Elapsed: 00:00:00.47
# Mc/sec: 4185.96
//
Query:       EPX74089.1  [L=411]
Description: monopolin-like complex subunit Mde4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      1e-14   54.8  26.6    2.9e-14   53.3  26.6    1.7  1  LRS4             Monopolin complex subunit LRS4
    0.00023   20.8  22.8       0.03   13.9   4.8    2.5  3  Filament         Intermediate filament protein
     0.0023   18.1   2.6     0.0023   18.1   2.6    2.4  2  DUF848           Gammaherpesvirus protein of unknown function
  ------ inclusion threshold ------
      0.015   15.1   0.2       0.13   12.2   0.2    2.5  2  Pox_A_type_inc   Viral A-type inclusion protein repeat
      0.058   13.2  12.9       0.62    9.9   3.5    2.7  2  Bacillus_HBL     Bacillus haemolytic enterotoxin (HBL)
      0.062   12.9  21.7       0.16   11.5  18.9    2.4  1  TMCO5            TMCO5 family
      0.088   13.2   4.5       0.65   10.4   1.0    3.0  3  LPP              Lipoprotein leucine-zipper
       0.12   12.5   6.3      0.054   13.6   1.7    2.8  2  bZIP_1           bZIP transcription factor
       0.12   12.5  29.2       0.43   10.7   8.2    3.1  3  Tropomyosin_1    Tropomyosin like
       0.22   10.4  23.5       0.33    9.8  11.3    2.3  2  Spc7             Spc7 kinetochore protein
       0.26   10.6  11.9      0.075   12.4   8.4    1.8  2  DUF4407          Domain of unknown function (DUF4407)
       0.27   11.3  29.9       0.16   12.0   8.1    3.9  3  TMF_DNA_bd       TATA element modulatory factor 1 DNA binding
       0.41   11.1  16.5        2.7    8.4   3.7    2.8  3  DUF4600          Domain of unknown function (DUF4600)
       0.46    9.8  32.3      0.017   14.5  13.3    2.8  3  FAM76            FAM76 protein
       0.66   10.4  17.4        1.6    9.2   3.9    3.0  3  DUF4200          Domain of unknown function (DUF4200)
       0.67    9.9  19.8        1.9    8.4   6.7    2.5  2  Ax_dynein_light  Axonemal dynein light chain
       0.84    9.8   4.3        6.7    6.9   0.4    3.0  2  XkdW             XkdW protein
        1.1    9.4  24.5      0.064   13.5   7.4    2.9  3  Jnk-SapK_ap_N    JNK_SAPK-associated protein-1
        1.7    8.7   8.8        7.3    6.7   1.3    2.6  2  DUF1664          Protein of unknown function (DUF1664)
          2    7.7  18.5        3.4    7.0   9.2    2.4  2  Cluap1           Clusterin-associated protein-1
        2.2    8.7  12.1       0.93    9.9   0.8    3.0  2  CC2-LZ           Leucine zipper of domain CC2 of NEMO, NF-kap
        2.7    8.2  12.9          4    7.7   2.0    2.7  2  FliJ             Flagellar FliJ protein
        3.6    7.4  11.7        1.1    9.1   1.7    2.7  2  DASH_Duo1        DASH complex subunit Duo1
        6.6    6.4  13.5       0.68    9.6   3.3    2.6  2  GrpE             GrpE


Domain annotation for each model (and alignments):
>> LRS4  Monopolin complex subunit LRS4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.3  26.6   3.9e-17   2.9e-14      18     249 .]      31     396 ..      16     396 .. 0.66

  Alignments for each domain:
  == domain 1  score: 53.3 bits;  conditional E-value: 3.9e-17
                 HHHH..........HHHHHHHXXXXXXXXXXXX...XXXXXXXXXXXXXX..................XXXXXXXXXXXXXXXX............... CS
        LRS4  18 YlekaLnlahllrsdslqksfldalktnatdse.lqnekltdEklllqeQ..................inqLnsdlqiqksene............... 82 
                 Yl ka n  h l++d l    l+a    ++ s   + e   dE+    +Q                  i +L sd+  + +++                
  EPX74089.1  31 YLAKASNIVHGLQTDILGRTRLEAANHVNKTSLhENYEHKSDENTKQVKQlkeinksllsdisqlknrISSLESDIAQNLEDMTtlrkqhqehlkqgvs 129
                 888888888888888887777776555444432122355566666666664444444444444444446666666554444444555555555555555 PP

                 ............XXXXXXXXXXXX.........................................XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        LRS4  83 ............klrklnKdqkal.........................................leSklsskesevdrfKikLeteesnskvrlqvre 128
                             k          +                                         l S +  kese++r+Kik+eteesn+kvrlqv+e
  EPX74089.1 130 peksshfehaecK----------TpnlsadnatvsssnteqitrfhhtitdlkktlkekdsdlnkLHSAVAAKESELNRWKIKMETEESNWKVRLQVLE 218
                 5555555555551..........055555555555555555566666666666667777888888********************************** PP

                 XXXXXXXXXXXXXXXXXXXXX.......XXXXXX.......XXXXXXXXXXXXXXXXXXX............XXXXXXXXX...XXXXXXXXXXXXXXX CS
        LRS4 129 sklatqdrklrskkksterkslLprvssfkLlSP.......ivgtrqpnatsgsplsvtP............sspsaqskq..PsglrellkhgddTif 206
                 sk+atq +klr + + ++rks    v ++ L SP       i ++ q+     sp  vtP            ssp+ +s     ++   +    ++T  
  EPX74089.1 219 SKVATQSKKLRKN-EGKGRKST---VNTLSLTSPaesslspISKNTQK----KSPFRVTPylqrtsaiigipSSPTHASPTvrSGRTTTTQTPTKETSL 309
                 ***********98.66777774...44455555533321117666666....9****************999666655554221122222233344433 PP

                 XXXXXXXXXX............................................XXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXX CS
        LRS4 207 dnvsdinddd............................................tdedsessflletiqptkstlrrsisaLkkrnd 249
                  +  + + +                                               e+s++s  +e+  +tk+tl r+is+ k r++
  EPX74089.1 310 TESTNKLTEHhnadsgnaiensacsqrltsltpskiplpvrkkrkfetdiakfeEPEESDTSMTMEVPLQTKVTLPRTISPPKARSE 396
                 222222221135577888888999999999999999999999999999999988889999999999999************998875 PP

>> Filament  Intermediate filament protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   8.0     4e-05      0.03     175     249 ..      49     123 ..      43     138 .. 0.91
   2 !   13.9   4.8     4e-05      0.03     202     276 ..     152     226 ..     131     232 .. 0.90
   3 ?   -2.3   0.0       3.5   2.6e+03      62     123 ..     315     379 ..     295     384 .. 0.51

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 4e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Filament 175 raqyeelaeknreeaeewykskleelqeaaeknsealrsakeeitelrrqiqsleieleslkkqkasleaqlael 249
                 r+  e+  + n++++ e+y+ k +e ++++++ +e  +s  ++i++l+ +i sle+++++  +   +l++q +e 
  EPX74089.1  49 RTRLEAANHVNKTSLHENYEHKSDENTKQVKQLKEINKSLLSDISQLKNRISSLESDIAQNLEDMTTLRKQHQEH 123
                 6678888999*****************************************************999999999886 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 4e-05
                 XXXXXXXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Filament 202 eaaeknsealrsakeeitelrrqiqsleieleslkkqkasleaqlaeleerleaeleklqeklseleeelaeire 276
                 + +++n+e++ + ++ it+l+++++++ ++l++l+++ a+ e++l+  + ++e+e ++ +  l+ le+++a+  +
  EPX74089.1 152 TVSSSNTEQITRFHHTITDLKKTLKEKDSDLNKLHSAVAAKESELNRWKIKMETEESNWKVRLQVLESKVATQSK 226
                 567899*************************************************************99987655 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 3.5
                 XXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXX CS
    Filament  62 qldeltkerarlqleldnlreeledlr.kkyekelnkreevEaelkalr..kdldeatlarvdLe 123
                 +l e +++ +   +e +   + l  l  +k+   ++k+++ E +++++    + d  + + v L+
  EPX74089.1 315 KLTEHHNADSGNAIENSACSQRLTSLTpSKIPLPVRKKRKFETDIAKFEepEESDTSMTMEVPLQ 379
                 44444444444444444444444444323444446677777777777664444455555555555 PP

>> DUF848  Gammaherpesvirus protein of unknown function (DUF848)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   2.6   3.1e-06    0.0023      63     121 ..      65     123 ..      48     135 .. 0.83
   2 ?    1.1   2.6      0.53   3.9e+02      42     114 ..     148     220 ..     137     240 .. 0.82

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 3.1e-06
      DUF848  63 eavdteieakkkelslLkklnrkkvarveeLtdkvlelkeevsleldsleeaqeeyqeg 121
                 e ++++ ++++k++++Lk++n+  + ++ +L++++  l+ +++++l+ ++   ++ qe 
  EPX74089.1  65 ENYEHKSDENTKQVKQLKEINKSLLSDISQLKNRISSLESDIAQNLEDMTTLRKQHQEH 123
                 5678888999**************************************99877766643 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.53
      DUF848  42 arkalrsleqlkrtkeikalveavdteieakkkelslLkklnrkkvarveeLtdkvlelkeevsleldsleea 114
                 a +a  s  ++++ ++ +++++ +++++++k  +l++L+     k  +++  + k++  + + +++l+ le +
  EPX74089.1 148 ADNATVSSSNTEQITRFHHTITDLKKTLKEKDSDLNKLHSAVAAKESELNRWKIKMETEESNWKVRLQVLESK 220
                 6677788899999999999999999999999999999999888888888888888888888888888888765 PP

>> Pox_A_type_inc  Viral A-type inclusion protein repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.2   0.00017      0.13       3      15 ..      92     104 ..      91     107 .. 0.93
   2 ?   -1.2   0.0       2.9   2.2e+03      10      19 ..     168     177 ..     166     177 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00017
  Pox_A_type_inc   3 msrlRsRIsDLEr 15 
                     +s+l++RIs+LE+
      EPX74089.1  92 ISQLKNRISSLES 104
                     89**********8 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 2.9
  Pox_A_type_inc  10 IsDLErqLse 19 
                     I DL++ L e
      EPX74089.1 168 ITDLKKTLKE 177
                     89***99965 PP

>> Bacillus_HBL  Bacillus haemolytic enterotoxin (HBL)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   3.5   0.00083      0.62     129     176 ..      61     108 ..      11     126 .. 0.70
   2 ?    8.0   1.9    0.0031       2.4     101     162 ..     169     230 ..     148     238 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00083
  Bacillus_HBL 129 kklklklakdsknFktdvdeltsilagdsgvisqlqneiedlqgkikk 176
                   ++l+++ +++s + +++v++l++i ++   +isql+n+i++l++ i++
    EPX74089.1  61 TSLHENYEHKSDENTKQVKQLKEINKSLLSDISQLKNRISSLESDIAQ 108
                   467777777777777777777777777777777777777777777764 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0031
  Bacillus_HBL 101 aellellekLqeeiqqnqkevkqlikeLkklklklakdsknFktdvdeltsilagdsgvisq 162
                    +l++ l++  +++++   +v ++  eL+++k k++ +++n k  ++ l+s +a++s+++ +
    EPX74089.1 169 TDLKKTLKEKDSDLNKLHSAVAAKESELNRWKIKMETEESNWKVRLQVLESKVATQSKKLRK 230
                   57888888888999999999999999****************************99999876 PP

>> TMCO5  TMCO5 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5  18.9   0.00021      0.16       9     136 ..      75     198 ..      70     237 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00021
       TMCO5   9 ekdlqrldeaNqslLrkiqekeetiqslereitk....ldsllereedeeenf.senekedalkeLeletaklekkneiLlkevveLqkkisrkeskqd 102
                  k+ ++l+e N+slL  i + ++ i+sle++i++    +  +l+++ +e++++ +  ek   +   e +t  l+  n++ +++ +   ++i+r +++ +
  EPX74089.1  75 TKQVKQLKEINKSLLSDISQLKNRISSLESDIAQnledM-TTLRKQHQEHLKQgVSPEKSSHFEHAECKTPNLSADNATVSSSNT---EQITRFHHTIT 169
                 68899****************************932212.233445555555514445555666699999999999999988765...58999887655 PP

       TMCO5 103 dleketlkqkleelkvklqkseescaeqekelak 136
                 dl+k     +l+e    l+k+++++a +e el++
  EPX74089.1 170 DLKK-----TLKEKDSDLNKLHSAVAAKESELNR 198
                 6666.....7788888888999999999999876 PP

>> LPP  Lipoprotein leucine-zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1       3.4   2.6e+03       4      19 ..      73      88 ..      70      91 .. 0.67
   2 ?   10.4   1.0   0.00088      0.65       5      30 ..      88     113 ..      82     119 .. 0.85
   3 ?    2.6   0.0      0.25   1.8e+02       8      39 ..     167     198 ..     160     199 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 3.4
         LPP  4 eLssqVsqLkskvdql 19
                e ++qV+qLk+  ++l
  EPX74089.1 73 ENTKQVKQLKEINKSL 88
                5578999998766655 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00088
         LPP   5 LssqVsqLkskvdqlssdvnsakaaa 30 
                 L s++sqLk+ +++l+sd+++  +++
  EPX74089.1  88 LLSDISQLKNRISSLESDIAQNLEDM 113
                 779***************99877766 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.25
         LPP   8 qVsqLkskvdqlssdvnsakaaaqaakeEAaR 39 
                  + +Lk+  ++  sd+n++++a++a   E +R
  EPX74089.1 167 TITDLKKTLKEKDSDLNKLHSAVAAKESELNR 198
                 5778999999999999**99999998877655 PP

>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   1.7   7.2e-05     0.054      33      62 ..      76     105 ..      68     107 .. 0.91
   2 ?   -1.1   0.2       2.8   2.1e+03      43      60 ..     169     186 ..     156     196 .. 0.60

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 7.2e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  33 rrvkaLekeNksLkseleelkkevekLksk 62 
                 ++vk+L++ NksL s +++lk+ +++L+s+
  EPX74089.1  76 KQVKQLKEINKSLLSDISQLKNRISSLESD 105
                 68*************************986 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 2.8
                 HHHHHHHHHHHHHHHHHH CS
      bZIP_1  43 ksLkseleelkkevekLk 60 
                 ++Lk++l+e   + +kL 
  EPX74089.1 169 TDLKKTLKEKDSDLNKLH 186
                 344555554444444444 PP

>> Tropomyosin_1  Tropomyosin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   8.2   0.00057      0.43      10      74 ..      65     129 ..      61     140 .. 0.90
   2 ?   10.2   8.3   0.00081       0.6      31     108 ..     162     240 ..     135     245 .. 0.82
   3 ?   -0.4   0.2       1.5   1.1e+03      55      73 ..     306     324 ..     298     340 .. 0.66

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00057
  Tropomyosin_1  10 eeaqekaeeleekvKeleqenlekeqeiksLtkknqqleeevekleeklkeakekaeesekkktn 74 
                    e+  +k +e  ++vK+l + n++  ++i++L+++++ le+++ +  e++++ +++ +e+ k+  +
     EPX74089.1  65 ENYEHKSDENTKQVKQLKEINKSLLSDISQLKNRISSLESDIAQNLEDMTTLRKQHQEHLKQGVS 129
                    78899**************************************9999999999999888777655 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00081
  Tropomyosin_1  31 lekeqeiksLtkknqqleeevekleeklkeakekaeesekkktnne.altrkiqlLEeeleesdkkLkettekLretdv 108
                    ++  + i++L+k +++ +++++kl +++   +++++  + k  + e + + ++q+LE  +   +kkL++   k r++ v
     EPX74089.1 162 TRFHHTITDLKKTLKEKDSDLNKLHSAVAAKESELNRWKIKMETEEsNWKVRLQVLESKVATQSKKLRKNEGKGRKSTV 240
                    455789***********************9999998877666666669999*****************98888777665 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 1.5
  Tropomyosin_1  55 eeklkeakekaeesekkkt 73 
                    e++l+e+++k+ e++++++
     EPX74089.1 306 ETSLTESTNKLTEHHNADS 324
                    5556666666666555554 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   8.6    0.0091       6.8     161     232 ..      52     123 ..      32     127 .. 0.70
   2 ?    9.8  11.3   0.00044      0.33     154     266 ..     112     226 ..     110     247 .. 0.82

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0091
        Spc7 161 qeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleel 232
                  e+  +  + +l+e+++  ++e +k+ ++ +e++++   ++ +l++++++l+++i++  +++++l++q +e 
  EPX74089.1  52 LEAANHVNKTSLHENYEHKSDENTKQVKQLKEINKSLLSDISQLKNRISSLESDIAQNLEDMTTLRKQHQEH 123
                 444555556667777777777777777777778888888999999999999999998888888888888775 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00044
        Spc7 154 dkelLekqeeel..dellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeei 250
                 d ++L kq +e   + + pe +++++  e +  +l + ++ ++s++ e++  +++++++lk++++ek  +l++l + ++++e++++  k ++++ e++ 
  EPX74089.1 112 DMTTLRKQHQEHlkQGVSPEKSSHFEHAECKTPNLSADNATVSSSNTEQITRFHHTITDLKKTLKEKDSDLNKLHSAVAAKESELNRWKIKMETEESNW 210
                 666666654433358999********************************************************************9999988888887 PP

        Spc7 251 aeaervleeckgwses 266
                 +   +vle +   +++
  EPX74089.1 211 KVRLQVLESKVATQSK 226
                 7776666655444444 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   8.4    0.0001     0.075     111     257 ..      62     209 ..      58     217 .. 0.69
   2 ?    5.3   2.9     0.014        11     111     172 ..     152     218 ..     138     337 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.0001
     DUF4407 111 elaeeqqeeakelkeqlaaa......ltaelaeleaqiaalqaeidaaearldalraeaqkeldgtkgtgttgvaGkgpaakekkaqldaaqaelaelk 203
                  l+e+++ + +e+++q+++       l +++++l+++i++l++ i++  +++++lr++ q++l++  + +   +    + a+ k+ +l a +a++ + +
  EPX74089.1  62 SLHENYEHKSDENTKQVKQLkeinksLLSDISQLKNRISSLESDIAQNLEDMTTLRKQHQEHLKQGVSPE---KSSHFEHAECKTPNLSADNATVSSSN 157
                 5778888888888888887677777788999999999999999999999999999999999999866555...44555666666677777777777766 PP

     DUF4407 204 akldatarlaalraelaeleaerakeraasqaaaaaddGllarlealdrltked 257
                 ++  + +r+ +  + l++  +e++++ ++  +a aa+   l r+++  +  +++
  EPX74089.1 158 TE--QITRFHHTITDLKKTLKEKDSDLNKLHSAVAAKESELNRWKIKMETEESN 209
                 66..55555555555555556666666666666666777777777755555555 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.014
     DUF4407 111 elaeeqqeeakelkeqlaaaltaelaeleaqiaalqaeidaaearldalraeaqkeldgtk......g 172
                 ++ + + e+++++  +++ +l+++l+e ++++++l ++++a+e++l++ + +++ e ++ k       
  EPX74089.1 152 TVSSSNTEQITRFHHTIT-DLKKTLKEKDSDLNKLHSAVAAKESELNRWKIKMETEESNWKvrlqvlE 218
                 455555666666655555.5778888888888888888888888887777776666665444444440 PP

>> TMF_DNA_bd  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   8.1   0.00021      0.16      22      65 ..      65     108 ..      64     124 .. 0.91
   2 ?   10.9   3.0   0.00046      0.35      33      74 .]     166     207 ..     159     207 .. 0.92
   3 ?    1.6   0.6      0.37   2.8e+02      28      45 ..     218     235 ..     208     262 .. 0.64

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00021
  TMF_DNA_bd  22 ekLskkelklnntikkLrkknkelekeikelkkkleklekelee 65 
                 e++++k +++ +++k+L++ nk l ++i++lk+++++le+++++
  EPX74089.1  65 ENYEHKSDENTKQVKQLKEINKSLLSDISQLKNRISSLESDIAQ 108
                 78999***********************************9975 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00046
  TMF_DNA_bd  33 ntikkLrkknkelekeikelkkkleklekeleeleerlkeae 74 
                  ti  L+k++ke ++++++l + ++ +e+el++ + +++++e
  EPX74089.1 166 HTITDLKKTLKEKDSDLNKLHSAVAAKESELNRWKIKMETEE 207
                 5999*****************************999988765 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.37
  TMF_DNA_bd  28 elklnntikkLrkknkel 45 
                 e k  ++ kkLrk + + 
  EPX74089.1 218 ESKVATQSKKLRKNEGKG 235
                 333444445555555544 PP

>> DUF4600  Domain of unknown function (DUF4600)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1       3.8   2.9e+03      12      27 ..      25      40 ..      23      82 .. 0.46
   2 ?    8.4   3.7    0.0036       2.7       3      59 ..      72     128 ..      70     135 .. 0.90
   3 ?    8.1   4.0    0.0046       3.5      24     106 ..     162     248 ..     155     267 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 3.8
     DUF4600 12 qlelNdqLekqiailk 27
                qlelN +L k  +i++
  EPX74089.1 25 QLELNYYLAKASNIVH 40
                6666666666554443 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.0036
     DUF4600   3 newktrYetqlelNdqLekqiailkeklekirgnpsdrlasirvleklteeelnqll 59 
                 +e + +   ++e+N+ L   i++lk++++++ ++  ++l+ + +l k  +e+l+q +
  EPX74089.1  72 DENTKQVKQLKEINKSLLSDISQLKNRISSLESDIAQNLEDMTTLRKQHQEHLKQGV 128
                 6777788889********************************999999999999865 PP

  == domain 3  score: 8.1 bits;  conditional E-value: 0.0046
     DUF4600  24 ailkeklekir...gnpsdrlasirvleklteeelnqllkqLekekkslenqlkdlelrleqEsKayhkande.Rkaylaelaqlsa 106
                  + ++ + +++   ++++ +l+ +++     e+eln+  +++e e ++ +  l+ le ++   sK  +k + + Rk  ++ l+ +s 
  EPX74089.1 162 TRFHHTITDLKktlKEKDSDLNKLHSAVAAKESELNRWKIKMETEESNWKVRLQVLESKVATQSKKLRKNEGKgRKSTVNTLSLTSP 248
                 4444444444433356667899999999****************************************9975427777777775553 PP

>> FAM76  FAM76 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6  10.2     0.011       8.5     197     298 ..      53     156 ..       8     158 .. 0.75
   2 ?   14.5  13.3   2.3e-05     0.017     176     287 ..     121     234 ..     111     245 .. 0.59
   3 ?   -0.4   0.5      0.76   5.7e+02     156     216 ..     306     369 ..     285     399 .. 0.40

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.011
       FAM76 197 aeekesnetskk.sldsnssdhlvavtqLkeeiaslkkqleqkdqellekdkkitelkaellekekelreklke.lekeakekieklekkirellkeva 293
                   +++ n+ts + + + +s ++  +v+qLke  +sl   ++q  + +++ +  i++   ++++ +k+++e+lk+ +  e +++ e+ e k  +l  ++a
  EPX74089.1  53 EAANHVNKTSLHeNYEHKSDENTKQVKQLKEINKSLLSDISQLKNRISSLESDIAQNLEDMTTLRKQHQEHLKQgVSPEKSSHFEHAECKTPNLSADNA 151
                 2333334443333788888899999**********************************************9983455777889999999999999999 PP

       FAM76 294 elskk 298
                 ++s +
  EPX74089.1 152 TVSSS 156
                 98876 PP

  == domain 2  score: 14.5 bits;  conditional E-value: 2.3e-05
       FAM76 176 skkhkkrssrlevskleeeklaeekesnetskksldsnssdhlvavtqLkeeiaslkkqleqkdqel.......lekdkkitelkaellekekelrekl 267
                 +++ k+  s  ++s+ e     +++ ++ + ++   + ss +  ++t+++ +i+ lkk+l++kd++l        +k+ ++  +k +++++e++++ +l
  EPX74089.1 121 QEHLKQGVSPEKSSHFE-----HAECKTPNLSADNATVSSSNTEQITRFHHTITDLKKTLKEKDSDLnklhsavAAKESELNRWKIKMETEESNWKVRL 214
                 22222222222222222.....11111112222334455666677888888899999999988887622222225688888888889999999999999 PP

       FAM76 268 kelekeakekieklekkire 287
                 + le+++ ++ +kl+k+  +
  EPX74089.1 215 QVLESKVATQSKKLRKNEGK 234
                 99998888888888876555 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.76
       FAM76 156 skkskkskekskekkaskkkskkhkkrssrlevskleeek....laeekesnetskksldsnssd 216
                 +++  +s++k  e+++ ++ +  ++++  ++  ++l+ +k    + ++ + +++++k  +++ sd
  EPX74089.1 306 ETSLTESTNKLTEHHNADSGNAIENSAC-SQRLTSLTPSKiplpVRKKRKFETDIAKFEEPEESD 369
                 1111111122111111111111111111.111122111112232222222333333344444444 PP

>> DUF4200  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   3.9    0.0021       1.6      54     108 ..      64     118 ..      49     130 .. 0.78
   2 ?    1.7   0.1      0.45   3.3e+02      78     106 ..     157     185 ..     150     187 .. 0.74
   3 ?    6.7   4.1     0.013       9.4       3      63 ..     177     237 ..     175     242 .. 0.92

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.0021
     DUF4200  54 lkendakraralkkaeeerklkkekeaeikklkaeietlkseiekleekleeykk 108
                  +  ++k+ +  k++++ ++ +k+  ++i +lk+ i+ l+s+i+++ e +  ++k
  EPX74089.1  64 HENYEHKSDENTKQVKQLKEINKSLLSDISQLKNRISSLESDIAQNLEDMTTLRK 118
                 455678999999999999**********************999988777776654 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.45
     DUF4200  78 keaeikklkaeietlkseiekleekleey 106
                  +++i ++++ i++lk+ +++ +  l+++
  EPX74089.1 157 NTEQITRFHHTITDLKKTLKEKDSDLNKL 185
                 56778888888888888887777777765 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.013
     DUF4200   3 ekkremfevqealeakkeeiqrleealkqreeelekkeqeleedllkfdkflkendakrar 63 
                 ek  ++ +++ a++ak+ e++r++ +++++e + + + q le +++   k l++n+ k ++
  EPX74089.1 177 EKDSDLNKLHSAVAAKESELNRWKIKMETEESNWKVRLQVLESKVATQSKKLRKNEGKGRK 237
                 78889999***********************************************988665 PP

>> Ax_dynein_light  Axonemal dynein light chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   6.7    0.0026       1.9     112     176 ..      60     126 ..      50     134 .. 0.82
   2 ?    6.8   5.2     0.008         6     122     178 ..     176     232 ..     153     239 .. 0.88

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0026
  Ax_dynein_light 112 rkal..qaeqgkselekkikeLeeekeelekqvaelkaklealekrekerrqeeekkheeeieflkk 176
                      + +l  + e++++e +k++k+L+e +++l + +++lk+++++le++ +++++  +  +++  e lk+
       EPX74089.1  60 KTSLheNYEHKSDENTKQVKQLKEINKSLLSDISQLKNRISSLESDIAQNLEDMTTLRKQHQEHLKQ 126
                      556632445888899999***************************9999998888888888777776 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.008
  Ax_dynein_light 122 selekkikeLeeekeelekqvaelkaklealekrekerrqeeekkheeeieflkksn 178
                      +e ++++++L + ++  e++++ +k k+e++e++ k r+q  e+k + + ++l+k++
       EPX74089.1 176 KEKDSDLNKLHSAVAAKESELNRWKIKMETEESNWKVRLQVLESKVATQSKKLRKNE 232
                      455666899********************************************9987 PP

>> XkdW  XkdW protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.4    0.0089       6.7      80     106 ..      77     103 ..      51     105 .. 0.83
   2 ?    3.3   0.0      0.12        87      23      60 ..     230     265 ..     218     276 .. 0.75

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0089
                 XXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        XkdW  80 arkqleelnktlgnelsklklellalk 106
                   kql+e+nk+l +++s+lk ++ +l+
  EPX74089.1  77 QVKQLKEINKSLLSDISQLKNRISSLE 103
                 569******************998876 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.12
                 EE-SS-..EEEEEE-SSS----HHHHHHHHHHHHHS-- CS
        XkdW  23 rndGdGrgsyieeWnlraPkPtekelktwWeelqsnpa 60 
                 +n+G Gr s +++  l++  P+e  l     ++q++++
  EPX74089.1 230 KNEGKGRKSTVNTLSLTS--PAESSLSPISKNTQKKSP 265
                 799*********987776..567777777777776655 PP

>> Jnk-SapK_ap_N  JNK_SAPK-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   7.4   8.5e-05     0.064      60     146 ..      40     126 ..      20     129 .. 0.87
   2 ?    5.1   4.5     0.033        25      38     116 ..     161     239 ..     137     269 .. 0.71
   3 ?   -1.8   0.1       4.4   3.3e+03     120     141 ..     300     321 ..     292     336 .. 0.67

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 8.5e-05
  Jnk-SapK_ap_N  60 eqLeteyerekelrkraeeeleeiedqweeerkelqekveqleeenrelelkaknaadqlsrleekeaelkkeysklheretellkk 146
                      L+t+   ++ l+ +   +   + +++e +  e  ++v+ql+e n+ l   ++++++++s+le+  a+  ++ ++l ++++e lk+
     EPX74089.1  40 HGLQTDILGRTRLEAANHVNKTSLHENYEHKSDENTKQVKQLKEINKSLLSDISQLKNRISSLESDIAQNLEDMTTLRKQHQEHLKQ 126
                    56788888888888888888889999************************99*****************999999999999998875 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.033
  Jnk-SapK_ap_N  38 LeslasrneeeeaeleelreeleqLeteyerekelrkraeeeleeiedqweeerkelqekveqleeenrelelkaknaa 116
                    +  ++      + +l+e   +l++L +    + ++ +r + ++e  e +w+ + + l++kv+   ++ r+ e k ++++
     EPX74089.1 161 ITRFHHTITDLKKTLKEKDSDLNKLHSAVAAKESELNRWKIKMETEESNWKVRLQVLESKVATQSKKLRKNEGKGRKST 239
                    4445555556677777777888888888888887778888888888888888888888888888877777775544443 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 4.4
  Jnk-SapK_ap_N 120 srleekeaelkkeysklheret 141
                    ++   ke++l+++ +kl+e+++
     EPX74089.1 300 TQTPTKETSLTESTNKLTEHHN 321
                    4444555666666666666554 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   1.3    0.0097       7.3      47     118 ..      78     107 ..      50     130 .. 0.53
   2 ?    5.7   1.1     0.019        14      79     119 ..     158     198 ..     145     234 .. 0.66

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0097
     DUF1664  47 skqleqvseslaatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeavegleskle 118
                  kql+++ +sl +   +L++ri ++                                          es ++
  EPX74089.1  78 VKQLKEINKSLLSDISQLKNRISSL------------------------------------------ESDIA 107
                 2333333444444444444444333..........................................33332 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.019
     DUF1664  79 keiskeikeevtevredlseigedvesvkeavegleskler 119
                 +e ++  ++ +t++++ l+e ++d++++++av   es+l+r
  EPX74089.1 158 TEQITRFHHTITDLKKTLKEKDSDLNKLHSAVAAKESELNR 198
                 45555566666666666666667777777666666666654 PP

>> Cluap1  Clusterin-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   8.4      0.13        94     147     203 ..      65     121 ..       3     129 .. 0.64
   2 ?    7.0   9.2    0.0046       3.4     126     218 ..      93     205 ..      87     219 .. 0.85

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.13
      Cluap1 147 velreartkalsrqleleeiekalkeaikkvkeelektkkalenlesdeanLeakie 203
                 ++  ++ ++ +++  +l+ei+k+l + i+++k++++++++++++  +d ++L ++ +
  EPX74089.1  65 ENYEHKSDENTKQVKQLKEINKSLLSDISQLKNRISSLESDIAQNLEDMTTLRKQHQ 121
                 333334444445555666666666666666666666666666666666666665554 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0046
      Cluap1 126 rqlaseitekgasLydlLekevelreartkals....................rqleleeiekalkeaikkvkeelektkkalenlesdeanLeakiek 204
                  ql + i +  + + + Le  ++lr+++++ l+                     + + +++ ++ +e+i++ +++++++kk l++ +sd ++L++ +  
  EPX74089.1  93 SQLKNRISSLESDIAQNLEDMTTLRKQHQEHLKqgvspeksshfehaecktpnLSADNATVSSSNTEQITRFHHTITDLKKTLKEKDSDLNKLHSAVAA 191
                 567777777777777788888888888888888888888888888888887778889999*************************************** PP

      Cluap1 205 kkqeleraqkrLqs 218
                 k++el+r + ++++
  EPX74089.1 192 KESELNRWKIKMET 205
                 *******9887765 PP

>> CC2-LZ  Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   2.5     0.078        58      22      61 ..      77     120 ..      56     130 .. 0.52
   2 ?    9.9   0.8    0.0012      0.93      11      54 ..     156     201 ..     145     205 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.078
      CC2-LZ  22 qlqaaeealaakqeeidelkeeikkkee....eletisvlkaQa 61 
                 q+++  e  ++  ++i +lk+ i++ e+    +le ++ l+ Q 
  EPX74089.1  77 QVKQLKEINKSLLSDISQLKNRISSLESdiaqNLEDMTTLRKQH 120
                 44444444444444444444444444443333444555555553 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.0012
      CC2-LZ  11 vkkeeieeLkaqlqaaeealaakqeeidelkeeikkkeeele..ti 54 
                  + e+i++ ++ +++  + l++k++++++l+  ++ ke+el+  +i
  EPX74089.1 156 SNTEQITRFHHTITDLKKTLKEKDSDLNKLHSAVAAKESELNrwKI 201
                 34899**********************************9985555 PP

>> FliJ  Flagellar FliJ protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   3.5      0.03        23      14      77 ..      64     122 ..      49     139 .. 0.64
   2 ?    7.7   2.0    0.0053         4      52     112 ..     159     219 ..     145     231 .. 0.69

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.03
        FliJ  14 lqqaeekleeleqyrqeyqkqlsgeaqglsaaelrnyqafisaldeaiaqqkqelaqaekqvek 77 
                  +++e+k +e +++ +++++  ++       +++ ++++ is+l++ iaq  ++ + ++kq ++
  EPX74089.1  64 HENYEHKSDENTKQVKQLKEINKSLL-----SDISQLKNRISSLESDIAQNLEDMTTLRKQHQE 122
                 45566666666666666655555555.....666666666666666666666666666555544 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.0053
        FliJ  52 afisaldeaiaqqkqelaqaekqvekareewqearqerkklekLkerekkeeqkeenrrEq 112
                 ++i +  ++i+ +k++l+ +  +++k  ++  +++ e++ +++  e+e+ ++  +++  E 
  EPX74089.1 159 EQITRFHHTITDLKKTLKEKDSDLNKLHSAVAAKESELNRWKIKMETEESNWKVRLQVLES 219
                 4566666667777777777777777777777777777777776666666666666665555 PP

>> DASH_Duo1  DASH complex subunit Duo1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   2.7      0.15   1.1e+02       4      43 ..      76     116 ..      75     126 .. 0.80
   2 ?    9.1   1.7    0.0015       1.1       6      47 ..     158     199 ..     155     209 .. 0.89

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.15
   DASH_Duo1   4 kEleqLrkinevienviesLkkaksnie.rvketvestntL 43 
                 k+++qL++in+ + + i++Lk+  s +e  +++++e++ tL
  EPX74089.1  76 KQVKQLKEINKSLLSDISQLKNRISSLEsDIAQNLEDMTTL 116
                 6789***********99999999977762588888888777 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0015
   DASH_Duo1   6 leqLrkinevienviesLkkaksniervketvestntLLdkW 47 
                  eq++++  +i +++++Lk+  s++++++++v   ++ L+ W
  EPX74089.1 158 TEQITRFHHTITDLKKTLKEKDSDLNKLHSAVAAKESELNRW 199
                 689999****************************99999999 PP

>> GrpE  GrpE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   3.3   0.00091      0.68       3      56 ..      74     127 ..      62     138 .. 0.81
   2 ?    2.4   1.7      0.15   1.1e+02      11      49 ..     165     203 ..     142     215 .. 0.51

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00091
                 ....CTTTHHHHCCCCCCTTCHHHCTTSCCCCCCTTTTTTTTHHHHHHHHHHHH CS
        GrpE   3 neeeeeeeedeeeeleeeleelekevkelkekllrllaefenlrkrtekekeea 56 
                 n+++ +++++ +++l +++++l++++ +l++++ + l+++  lrk++++ +++ 
  EPX74089.1  74 NTKQVKQLKEINKSLLSDISQLKNRISSLESDIAQNLEDMTTLRKQHQEHLKQG 127
                 556667777777778888999*************************99988875 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.15
                 HHHHCCCCCCTTCHHHCTTSCCCCCCTTTTTTTTHHHHH CS
        GrpE  11 edeeeeleeeleelekevkelkekllrllaefenlrkrt 49 
                   ++++l++ l+e ++ +++l++++  ++ e+   + ++
  EPX74089.1 165 HHTITDLKKTLKEKDSDLNKLHSAVAAKESELNRWKIKM 203
                 233444444444444455555555555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (411 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2540  (0.14167); expected 358.6 (0.02)
Passed bias filter:                      605  (0.0337442); expected 358.6 (0.02)
Passed Vit filter:                        98  (0.005466); expected 17.9 (0.001)
Passed Fwd filter:                        50  (0.00278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              24  [number of targets reported over threshold]
# CPU time: 1.04u 0.41s 00:00:01.45 Elapsed: 00:00:00.64
# Mc/sec: 1941.43
//
Query:       EPX74090.1  [L=928]
Description: NAK protein kinase Ppk30 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.5e-41  140.0   0.0    1.5e-40  139.3   0.0    1.4  1  Pkinase      Protein kinase domain
    9.1e-28   97.2   0.0    1.4e-27   96.6   0.0    1.3  1  Pkinase_Tyr  Protein tyrosine kinase
     0.0002   21.3   0.0     0.0043   17.0   0.0    2.1  2  APH          Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.3   0.0   2.5e-44   1.5e-40       4     260 ..      62     324 ..      59     327 .. 0.88

  Alignments for each domain:
  == domain 1  score: 139.3 bits;  conditional E-value: 2.5e-44
                 EEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS.CTTB--EEEEEEE......SSEEEEEEE--TTEBHHHHHH..HHS CS
     Pkinase   4 leklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklk.hpnivrlyevfee......kdelylvleyveggeladlle..rkg 93 
                 ++ l eG+f+ Vy +  +++++  ++K+i + ++   +   v  Ei+ +k+lk h++iv+++++           e++l++ey+ gg l d+++   ++
  EPX74090.1  62 IRYLSEGGFSHVYLVE-TQDKRCCVLKRIHVPDKAALQL--VHGEIETMKRLKgHRHIVNYIDSNALysnsanRYEVFLLMEYCAGGGLIDFMNtrLQT 157
                 667889*******998.78999999*******9998776..*********************9876666666677788***************964445 PP

                 S--HHHHHHHHHHHHHHHHHHHHTT..EE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS..........BCTTTSCGGGS-HHHH...TTSCBSHH CS
     Pkinase  94 slseeeakkiakqilegleylHskg..iiHrDlKpeNiLidekgelKitDFGlakelesssk..........ltsfvgtseYlAPEvl...keneyskk 177
                  l+e e+ ki++ ++ +++ +H     +iHrDlK eN+L+   +  K++DFG a+e+    +                t++Y+ PE++   +++++++k
  EPX74090.1 158 RLTEGEILKILADVCDAVAAMHYLDppLIHRDLKIENVLLVAPNSYKLCDFGSACEAIPPATtaesmlwvekNIAAYTTPQYRCPEMIdlnRHQGIDEK 256
                 6*********************65555**************9999***********9999888999**9987667789***********9999999*** PP

                 HHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHT CS
     Pkinase 178 vDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellq 260
                 +D+W++Gv+ y+l + ++pf+                    il + ++++p   + s+ +k+++  +l+++p++R+ + + l+
  EPX74090.1 257 SDIWAIGVLAYKLCYYTTPFETV----------GS----PAIL-KASFSIPPFPKYSDRLKRFIATCLQEQPSHRPNIYQTLK 324
                 *********************22..........22....3333.24899****************************999887 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.6   0.0   2.4e-31   1.4e-27       2     257 ..      60     324 ..      59     326 .. 0.81

  Alignments for each domain:
  == domain 1  score: 96.6 bits;  conditional E-value: 2.4e-31
                  EEEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS.-BTTB--EEEEEE......SSSSEEEEEE--TTEBHHHHH CS
  Pkinase_Tyr   2 elgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkkl.khpnivkllgvct......keepllivteyvkgGdLlkfL 92 
                  ++ + l eG f++V+  + +     ++  +++K ++   ++   + +  e+++mk+l  h++iv+++          ++ ++++++ey++gG L +f+
   EPX74090.1  60 TVIRYLSEGGFSHVYLVETQ-----DKRCCVLKRIHVP-DKAALQLVHGEIETMKRLkGHRHIVNYIDSNAlysnsaNRYEVFLLMEYCAGGGLIDFM 151
                  5678899********99988.....7778889999544.4444777888********99******99765554544444559**************** PP

                  HHTCTTTSBHHHHHHHHHHHHHH...HHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEET.....TTSSEE...EETTSSTSGGGGS-HHHHHH CS
  Pkinase_Tyr  93 rkkekekltlkdllsfalqvAkG...meyLeskklvHrdlaarNvLlsenkvvkisDfGLardi.....ekddey...vkkeeaklpvkWmapEslke 179
                  +++ +++lt  ++l++ ++v+++   m+yL    l+Hrdl   NvLl   +  k++DfG a +      + ++ +   +k+  a +  ++  pE+++ 
   EPX74090.1 152 NTRLQTRLTEGEILKILADVCDAvaaMHYLD-PPLIHRDLKIENVLLVAPNSYKLCDFGSACEAippatTAES-MlwvEKNIAAYTTPQYRCPEMIDL 247
                  *********************8522277775.68*************************88765343212222.256455556678899*******98 PP

                  SE...EEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 180 kk...ftsksDvWsfGvllwEiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfselve 257
                  ++   + +ksD+W+ Gvl + ++    +p++++ +  +   lk++  ++   k +++l++++ +c++e+p++Rp++ + ++
   EPX74090.1 248 NRhqgIDEKSDIWAIGVLAYKLCY-YTTPFETVGSPAI---LKASFSIPPFPKYSDRLKRFIATCLQEQPSHRPNIYQTLK 324
                  777779****************99.5789999977765...56777888888899*******************9987665 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   7.2e-07    0.0043       2     111 ..      62     184 ..      61     187 .. 0.83
   2 ?    2.9   0.0     0.015        90     168     181 ..     185     198 ..     181     218 .. 0.75

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 7.2e-07
                 EEEE--.SSCEEEEEEETT.--EEEEEE-TT..S-HHHHHHHHHHHHHHHHTT-B--B-C...TTBS-EEETTEEEEEEE----EE-SS........HH CS
         APH   2 vrelsggasnrtylvttpa.gryvlrrnppa..raaeeirrevallrlLakagvpvPevl...agdtddeeigllfalieyvpgrsllr........kl 86 
                 +r ls g  +++ylv+t + +  vl+r++ +   a + +++e + ++ L ++   +   +   a+  + + ++ +f+l+ey+ g  l +        +l
  EPX74090.1  62 IRYLSEGGFSHVYLVETQDkRCCVLKRIHVPdkAALQLVHGEIETMKRLKGHRH-IVNYIdsnALYSNSANRYEVFLLMEYCAGGGLIDfmntrlqtRL 159
                 56677776667********99******8888767777789**********9954.5566533356666666666****************99***9999 PP

                 HHHHHHHHHHHHHHHHCCHHCH.-S CS
         APH  87 saaqlpellealgeflaalhqvdpa 111
                 ++ ++ ++l+++ ++ aa+h +dp+
  EPX74090.1 160 TEGEILKILADVCDAVAAMHYLDPP 184
                 9*******************99876 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.015
                 EE-SS-SGGGEEEC CS
         APH 168 llHgDlhpgNllvd 181
                 l+H+Dl+  N+l+ 
  EPX74090.1 185 LIHRDLKIENVLLV 198
                 89**********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (928 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       617  (0.0344135); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.73u 0.31s 00:00:01.04 Elapsed: 00:00:00.51
# Mc/sec: 5512.53
//
Query:       EPX74091.1  [L=276]
Description: Pal1 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-14   54.2   0.4    4.1e-14   53.5   0.4    1.4  1  Pal1      Pal1 cell morphology protein


Domain annotation for each model (and alignments):
>> Pal1  Pal1 cell morphology protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.5   0.4   2.3e-18   4.1e-14       1      98 [.     138     242 ..     138     260 .. 0.60

  Alignments for each domain:
  == domain 1  score: 53.5 bits;  conditional E-value: 2.3e-18
        Pal1   1 DtiDkLDvtglfgglf..HHdGPfDAvtphrNknskaaPvlAfpkdgannslggagklnkk.saldevf....Gredeeddkdlaklsakakkkesset 92 
                 D+iD+LD +  + g f  HHdGPf+ +  hrN +  ++Pv+Af +++  nsl++  +++k+ ++l +      G + ++ + + + +++ +++++++e+
  EPX74091.1 138 DRIDQLDTSNSYLGNFgvHHDGPFEPCCKHRNLDISTSPVAAFSENSGANSLSALIPKDKSeEDLTSDNsiweGAN-TNTYGSPTYVEQDSSHSNDQES 235
                 89**********876555********************************99995443333022221111223443.3333332232333333333332 PP

        Pal1  93 .kaakks 98 
                  +  +++
  EPX74091.1 236 eSLLNNN 242
                 1222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (276 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       434  (0.0242066); expected 358.6 (0.02)
Passed bias filter:                      265  (0.0147805); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1923.14
//
Query:       EPX74092.1  [L=1957]
Description: TATA-binding protein associated factor Mot1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   4.5e-104  349.1   2.0   4.2e-103  345.9   0.0    3.2  4  DUF3535        Domain of unknown function (DUF3535)
    5.9e-65  219.3   0.2    1.4e-64  218.1   0.2    1.5  1  SNF2_N         SNF2 family N-terminal domain
    6.8e-18   65.0   0.0    1.9e-17   63.6   0.0    1.8  1  Helicase_C     Helicase conserved C-terminal domain
    1.6e-13   49.6  10.6      0.012   15.8   0.0    9.3  9  HEAT           HEAT repeat
    4.9e-09   36.5   0.3     0.0026   18.1   0.1    5.8  5  HEAT_2         HEAT repeats
    3.4e-06   27.6   0.0        0.2   12.3   0.0    4.0  3  Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
     0.0003   20.7   1.3     0.0072   16.2   0.0    3.5  3  DUF3385        Domain of unknown function (DUF3385)
  ------ inclusion threshold ------
      0.021   15.1   0.1         27    5.2   0.0    3.8  3  TAF6_C         TAF6 C-terminal HEAT repeat domain
      0.044   14.3  11.1         21    5.7   0.0    7.2  8  HEAT_EZ        HEAT-like repeat
        4.1    7.4   8.7         33    4.5   0.1    4.1  4  Cnd1           non-SMC mitotic condensation complex subunit 1


Domain annotation for each model (and alignments):
>> DUF3535  Domain of unknown function (DUF3535)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0       0.3   5.3e+02     106     131 ..      54      79 ..      22      90 .. 0.79
   2 ?   -5.0   1.5       7.2   1.3e+04      45      95 ..     290     342 ..     277     353 .. 0.47
   3 ?   -0.4   0.0       0.3   5.3e+02     103     140 ..     441     476 ..     436     488 .. 0.84
   4 !  345.9   0.0  2.4e-106  4.2e-103      11     435 .]     693    1148 ..     683    1148 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.3
     DUF3535 106 viraRiaaakaLGlllsylpeespld 131
                    +R+aaaka+G ++  +p  +p +
  EPX74092.1  54 NWDTRVAAAKAIGGIAENVPVWNPNE 79 
                 5689*********9999985544444 PP

  == domain 2  score: -5.0 bits;  conditional E-value: 7.2
     DUF3535  45 psgqaksssek.....kkkkeeeasskrkrskkkaeakgekasasshnvdkeyigg 95 
                 + +q+kss++      +   +++++s+ k++k++++++ e + ++  + dk +++ 
  EPX74092.1 290 KAKQMKSSQKVrvidvA--PNTNQQSS-KTTKSDSNSAPEYNFTAQSQSDKLVVEH 342
                 44444444444565331..22222222.2233333333333334445566666555 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.3
     DUF3535 103 eanviraRiaaakaLGlllsylpeespldcytkvLlgh 140
                 + +v   R + +++LG +l y+p++s + ++ kvL ++
  EPX74092.1 441 Q-VVAPIRESVSQVLGVALIYVPDSS-VHSMYKVLHSL 476
                 4.78889****************777.99999998765 PP

  == domain 4  score: 345.9 bits;  conditional E-value: 2.4e-106
     DUF3535   11 leallhaacphlsswlcLamtPigv.....pldpslllkpsgqaksssek..kkkkeeeasskrkrskkkaeakgekasasshnvdkeyiggdetlv 100 
                   +++++ ++ph++++l+++mtPig+     p+d+sll+kpsgq+++ +++  +++++  ++   +r+k++ +a++++ s+ s +vd+++++gd++ v
  EPX74092.1  693 TDKFTEMMKPHIEAMLKVTMTPIGStrhpyPIDTSLLIKPSGQPYAIRSTsqDRNSKFMFDLP-SRRKQRRHAESDSGSSFSYSVDEPMLNGDVEFV 788 
                  56788999**************************************99886644444444433.344444445555567777*************** PP

     DUF3535  101 geeanviraRiaaakaLGlllsylpeespldcytkvLlghLnsksalqrlvaalvieewakedkkekkevstlpetlqeklleiLeeeepvyYdEla 197 
                  gee  ++r+R+ aa++LG++l  +++++ l  +++ L  +L+s+++++ ++++ +iee++ +++++        e++ + l ++ ++    +Y++l+
  EPX74092.1  789 GEE-RMLRCRLGAASILGAILGRWKRDEILPIFESPLKLCLSSPFSTPVVLCSRLIEEFFAFKDSDL---AIQKEKFHQMLCDQFTTIPRETYANLV 881 
                  ***.9*********************************************************96333...3344555555555555444446***** PP

     DUF3535  198 lsltrlrqecqdllatlesvg.....klpklavvvqgeae...kaftleqaeklvttdyekllkslslkqkllaekqLeerrrrlqaaieeakeeqe 286 
                  ++l+ +r++c++ll+t+++ g     k+p lavvv+g+a+   +af +++aek+++ ++e+l++ ls++qk ++ k+  e +  +   ++ +k  ++
  EPX74092.1  882 PQLHIVRAQCNALLNTFVDLGrasrnKIPVLAVVVKGDADagpNAFGIDDAEKIIGPTFESLFSTLSPSQKSVSGKTFSEMKLLVSDEVSMYKDHKD 978 
                  ************************************************************************************************* PP

     DUF3535  287 alhvrvqaalAgAlvalkelPkKLnpvikpLMeSiKkEeneeLQqrsAkalakLielcvdr.kpcpndKIvkNLctflcsDtsetPef...kkegIl 379 
                  ++++++ aalA+ +v+ ++lPkKLnp+ik++MeSiKkE  + LQ++sA a++kLi+ c+++ ++++++KIvkNLc+++c+DtsetP f    k+gIl
  EPX74092.1  979 TIDIQCAAALASGIVSYEKLPKKLNPIIKGIMESIKKERFSCLQRHSAMAMMKLISSCYKEsRQNISEKIVKNLCAYVCMDTSETPIFeesEKRGIL 1075
                  ************************************************************************************************* PP

     DUF3535  380 tlkkeedkaeaada.................aeeeeeakeariqrrGAelaLetlakkFgasLfekvPkLwel 435 
                  +++++e++ e  d+                  +++ e+++a +qr GA+l+L+ +a++F ++Lfe vP L ++
  EPX74092.1 1076 SISNSESEVEEIDGekigkvtegevderrktRSSSTEKDAAILQRVGAQLTLQLMASTFRNRLFEDVPVLSQC 1148
                  ****888888532223344444444445553555555556******************************997 PP

>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  218.1   0.2   7.7e-68   1.4e-64      56     349 ..    1382    1678 ..    1365    1679 .. 0.87

  Alignments for each domain:
  == domain 1  score: 218.1 bits;  conditional E-value: 7.7e-68
                  --EEE---TTS--HHHHHHHHH...HHTTTS---...........S-EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH-------------- CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N   56 rGGiLaDemGLGKTvqvlalilaqrakeekdkek....krkdtlagptLivvPaslldqWeneierhvsssalrvlvyggqkkmkkkntkvapklla 148 
                    GiL+D+mGLGKT+q++++++   +++++++++    k  + +  p L+v+P++l+ +W++e+ ++++  ++  +v+          +  ++k+l+
  EPX74092.1 1382 LHGILCDDMGLGKTLQTICVVA---SDHHNRQKAfeetKSPRYAHAPSLVVCPSTLAGHWQQELLTYAPFLKVLLYVGPPTD------RSKLRKQLK 1469
                  67********************...667777766776677778899*************************99888887754......344679*** PP

                  ---EEEE-HHHHHHHT......TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHHHHHHH-TTTT--HHHHHHHT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  149 dydvvittYdvlsreaelqkkrsvlkqvewkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledlygLlkfLreepfgekqtfdkll 245 
                    dvv+t+Yd+ +++       + l++v+w++ vlDEgh +kn  +k+++av+ L++ +r+il+GTPiqn++ +l++L++fL+++ +g+ + f++++
  EPX74092.1 1470 VVDVVVTSYDICRNDM------DSLVKVDWNYCVLDEGHVIKNARAKLTKAVKCLRSYHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKIFHERF 1560
                  *************888......9************************************************************************** PP

                  HHHHH............HHHHHHHHHHHTT-STTEE---GGGT--S---EEEEEEEEE--HHHHHHHH....................HHHHHH-HH CS
                  xxxxx............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  246 qrpie............aqaekgrsrLlqllqrlmlrrakkdveknlPpkteeiiflklskverksYnrllevlrkkalakllkrseaalksssksk 330 
                   +pi+            +  +   + +++ + +++lrr k+dv ++lPpk+ +  ++++s+ +rk+ n+ +++l  +  + + + +e + k ++k++
  EPX74092.1 1561 VKPIAasrdakssskerERGTLALEAIHKQVLPFLLRRLKEDVLADLPPKIIQDYYCEMSDLQRKLHNEFISQLNINEELEVNVDEEENKKPAKKKS 1657
                  **********99886655556666667777779***********************************77777666666666666655555555444 PP

                  H-...HHHHHHHHHHHHH---X CS
                  xx...xxxxxxxxxxxxxxxxx RF
      SNF2_N  331 ek...ilelllelrqacnhpql 349 
                       i++ l+  r+ cnhp l
  EPX74092.1 1658 -PkghIFQALQYMRKLCNHPAL 1678
                  .0468***************88 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.6   0.0   1.1e-20   1.9e-17      12     111 .]    1738    1842 ..    1732    1842 .. 0.89

  Alignments for each domain:
  == domain 1  score: 63.6 bits;  conditional E-value: 1.1e-20
                  HTTTTSEEEEEESSHHHHHH..HHHHHHHT..TSTEEEESTTSTHHHHHHHHHHHH.TTSSS.EEEESGGGTSSSTSTTESEEEESSSSSSHHHHHH CS
  Helicase_C   12 leeeggkilifvntidrlek..vklllekk..gikvavlhgelpqnereeileqfn.kgesd.vLiatdvaerGidipkvnlVinfdlprnvtsyiq 102 
                  + ++++++lif++ +d+l++   +ll +    ++++ +l+g+ +  +r+e++++fn + ++d +L++t v++ G++++++++Vi+++ ++n+ +  q
  EPX74092.1 1738 NPVSEHRVLIFCQLKDMLDMveKDLL-QATmpSVSYMRLDGSVEPTKRQEAVTKFNnDPSIDvLLLTTHVGGLGLNLTGADTVIFVEHDWNPMRDLQ 1833
                  567899**********9999855555.444699**********************9668899888******************************** PP

                  HHTTSSSTT CS
  Helicase_C  103 riGRtgRag 111 
                  +++R++R+g
  EPX74092.1 1834 AMDRAHRIG 1842
                  *******97 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0     0.019        34       4      29 ..       7      33 ..       5      35 .. 0.71
   2 !   15.8   0.0   6.8e-06     0.012       2      30 ..      43      71 ..      42      72 .. 0.89
   3 !    7.3   0.0    0.0036       6.5       4      29 ..     368     393 ..     365     395 .. 0.81
   4 ?   -3.4   0.1        10   1.8e+04      17      29 ..     424     436 ..     423     438 .. 0.83
   5 ?    2.9   0.1     0.093   1.7e+02       1      24 [.     520     543 ..     520     550 .. 0.88
   6 ?   -1.2   0.0         2   3.5e+03      14      28 ..     628     642 ..     615     643 .. 0.73
   7 ?    3.6   0.1     0.055        98       1      28 [.    1202    1229 ..    1202    1232 .. 0.89
   8 ?    3.3   0.0     0.073   1.3e+02       2      29 ..    1243    1271 ..    1242    1273 .. 0.85
   9 !    8.7   0.0    0.0013       2.3       1      29 [.    1285    1312 ..    1285    1314 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.019
                HHHHHHT-.SSHHHHHHHHHHHHHHHH CS
        HEAT  4 lllkllsD.pspeVReaAakaLgalae 29
                 l+ ll   + + VReaAak ++++ +
  EPX74092.1  7 RLVVLLDNgSTSVVREAAAKQIADIQK 33
                56667744155568********99976 PP

  == domain 2  score: 15.8 bits;  conditional E-value: 6.8e-06
                HHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT  2 lPlllkllsDpspeVReaAakaLgalaev 30
                l  ++  l++++++ R aAaka+g +ae+
  EPX74092.1 43 LGRVVPYLKSKNWDTRVAAAKAIGGIAEN 71
                6678889********************97 PP

  == domain 3  score: 7.3 bits;  conditional E-value: 0.0036
                 HHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAakaLgalae 29 
                 l+l  + Dp++e+R  A+  L ++++
  EPX74092.1 368 LFLVDMFDPAWEIRHGACMGLREIIR 393
                 5555568***************9976 PP

  == domain 4  score: -3.4 bits;  conditional E-value: 10
                 HHHHHHHHHHHHH CS
        HEAT  17 ReaAakaLgalae 29 
                 R a++ aL ++  
  EPX74092.1 424 RIACVFALDRFGD 436
                 89******98866 PP

  == domain 5  score: 2.9 bits;  conditional E-value: 0.093
                 HHHHHHHHHT-SSHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaL 24 
                 l++++++ l  ++ +VR+ +a++L
  EPX74092.1 520 LIDIVIQGLANNDDDVRAVSALTL 543
                 68899999*************998 PP

  == domain 6  score: -1.2 bits;  conditional E-value: 2
                 HHHHHHHHHHHHHHH CS
        HEAT  14 peVReaAakaLgala 28 
                 + VR+++++aL +++
  EPX74092.1 628 SGVRRSVIYALSKFV 642
                 569********9886 PP

  == domain 7  score: 3.6 bits;  conditional E-value: 0.055
                  HHHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT    1 llPlllkllsDpspeVReaAakaLgala 28  
                  +lP+ll + + + +++R ++ak+L+ ++
  EPX74092.1 1202 ILPHLLPAVCCEYSSIRFMVAKCLASVS 1229
                  799999999999************9876 PP

  == domain 8  score: 3.3 bits;  conditional E-value: 0.073
                  HHHHHHHHT-.SSHHHHHHHHHHHHHHHH CS
        HEAT    2 lPlllkllsD.pspeVReaAakaLgalae 29  
                  +  ++ ll D ++   R+ A++++ ++++
  EPX74092.1 1243 VENIVPLLGDpTNITHRQGAIECIYQVVQ 1271
                  67789999**778889*********9987 PP

  == domain 9  score: 8.7 bits;  conditional E-value: 0.0013
                  HHHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT    1 llPlllkllsDpspeVReaAakaLgalae 29  
                  ++Pll + +sD++ +VR  A  ++++l++
  EPX74092.1 1285 IIPLLGR-MSDSDKDVRTLATSSFATLVK 1312
                  5677555.6******************98 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.1   1.4e-06    0.0026       2      60 ..       6      70 ..       5      82 .. 0.85
   2 ?   -0.3   0.0      0.81   1.5e+03      11      27 ..     375     391 ..     363     402 .. 0.74
   3 ?   -0.3   0.1      0.82   1.5e+03      32      76 ..     520     574 ..     514     582 .. 0.70
   4 ?    1.8   0.0      0.18   3.1e+02      31      58 ..     614     641 ..     598     656 .. 0.85
   5 !    7.1   0.0     0.004       7.2       1      86 [.    1203    1306 ..    1200    1308 .. 0.67

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 1.4e-06
      HEAT_2  2 daLlqalendpdpevrraairaLg..rignp....ealpaLvellededpavRraaaeaLgaigd 60
                d L+ +l n +   vr aa+++++  ++++p     +l  +v++l+++++++R aaa+a+g i++
  EPX74092.1  6 DRLVVLLDNGSTSVVREAAAKQIAdiQKAHPvelyNLLGRVVPYLKSKNWDTRVAAAKAIGGIAE 70
                667778878888899*********5555666888888************************8875 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.81
      HEAT_2  11 dpdpevrraairaLgri 27 
                 dp +e+r+ a++ L +i
  EPX74092.1 375 DPAWEIRHGACMGLREI 391
                 67777777777777654 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.82
      HEAT_2  32 alpaLvellededpavRraaaeaL.........gaigd.pealpaLkellddddd 76 
                 +++++++ l + d +vR+  a +L         g++++  + l++L ++ldd +d
  EPX74092.1 520 LIDIVIQGLANNDDDVRAVSALTLlpvadklvaGKLDScRQLLNVLWDCLDDVKD 574
                 5677777787888888888887776666666666777667777888887766555 PP

  == domain 4  score: 1.8 bits;  conditional E-value: 0.18
      HEAT_2  31 ealpaLvellededpavRraaaeaLgai 58 
                 +++p L+ l++ + + vRr ++ aL+++
  EPX74092.1 614 TLVPRLFYLMRYTLSGVRRSVIYALSKF 641
                 6799999******************987 PP

  == domain 5  score: 7.1 bits;  conditional E-value: 0.004
      HEAT_2    1 ldaLlqalendpdpevrraairaLgrignp.........ealpaLvelled.edpavRraaaeaLgai....g...dpe...alpaLkelldddddd 77  
                  l++Ll a+  ++   +r +++++L++  +           +++ +v+ll d ++   R+ a+e + ++    g   +p     +  L+ ++  d+d 
  EPX74092.1 1203 LPHLLPAV-CCEYSSIRFMVAKCLASVSDSvtagskalrMLVENIVPLLGDpTNITHRQGAIECIYQVvqrlGvrvLPYvlyLIIPLLGRMS-DSDK 1297
                  57888988.899999999999999955554333332333559999999999557899****9999766433343332334445677777774.5666 PP

      HEAT_2   78 vvReaAaea 86  
                  +vR+ A+++
  EPX74092.1 1298 DVRTLATSS 1306
                  678777766 PP

>> Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.97   1.7e+03      12      57 ..     349     394 ..     346     397 .. 0.87
   2 !    9.3   0.1   0.00095       1.7       5      89 ..     494     581 ..     490     588 .. 0.78
   3 !   12.3   0.0   0.00011       0.2      22      88 ..    1236    1303 ..    1215    1313 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.97
  Vac14_Fab1_bd  12 avaialekkikeyleeivkpvlkcfsDkdsrvRyyacEslyniakv 57 
                    ++a+a+++++   ++++v+  l  + D   ++R+ ac  l  i++ 
     EPX74092.1 349 SAAVAVTSDSVWPFKTLVELFLVDMFDPAWEIRHGACMGLREIIRF 394
                    578888999888899**********************999888775 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00095
  Vac14_Fab1_bd   5 ggligLaavaialekk....ikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalvklvaDsdesvksgae 89 
                    gg++g+  + +a++       + yl++++++v++ +  +d+ vR  ++ +l  +a ++    l    +++++l+  + D++ ++ s+++
     EPX74092.1 494 GGMLGIKYL-VAMKYPmffsQSFYLDSLIDIVIQGLANNDDDVRAVSALTLLPVADKLVAGKLDSCRQLLNVLWDCLDDVKDDLSSSTA 581
                    666665432.22322223436789*********************************9999******************9999876544 PP

  == domain 3  score: 12.3 bits;  conditional E-value: 0.00011
  Vac14_Fab1_bd   22 keyleeivkpvlkcfsDkds.rvRyyacEslyniakvakgevlkllneifdalvklvaDsdesvksga 88  
                     ++ l+ +v+ ++  + D  +   R  a+E++y +++ +  +vl ++  +   l   ++Dsd++v++ a
     EPX74092.1 1236 SKALRMLVENIVPLLGDPTNiTHRQGAIECIYQVVQRLGVRVLPYVLYLIIPLLGRMSDSDKDVRTLA 1303
                     45677888888888888755256888899999999999999998888888888888889999888744 PP

>> DUF3385  Domain of unknown function (DUF3385)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0      0.41   7.3e+02      89     133 ..       6      50 ..       2      66 .. 0.88
   2 ?   -0.6   0.3      0.62   1.1e+03      78     155 ..     975    1054 ..     945    1058 .. 0.69
   3 !   16.2   0.0     4e-06    0.0072      87     160 ..    1242    1314 ..    1220    1315 .. 0.92

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.41
     DUF3385  89 naLlrilkdpslsshhaavveaimnifktlglkcvpfLdqiipal 133
                   L+ +l++ s s  ++a+ + i  i k   ++  ++L +++p l
  EPX74092.1   6 DRLVVLLDNGSTSVVREAAAKQIADIQKAHPVELYNLLGRVVPYL 50 
                 568888999999999999999999999999999999999999976 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.62
     DUF3385   78 sneeyyptvvinaLl.rilkdpslsshhaavveaimnifktlglkc.vpfLdqiipallsvirtteesnlrefllqqLat 155 
                   +++ +     +aL+  i++ ++l ++ + +++ im  +k+ + +c        + +l+s + + +++n++e ++++L+ 
  EPX74092.1  975 DHKDTIDIQCAAALAsGIVSYEKLPKKLNPIIKGIMESIKKERFSClQRHSAMAMMKLISSCYKESRQNISEKIVKNLCA 1054
                  44555555445555535777788888888899999999999999994445666677888877777888999988888875 PP

  == domain 3  score: 16.2 bits;  conditional E-value: 4e-06
     DUF3385   87 vinaLlrilkdpslsshhaavveaimnifktlglkcvpfLdqiipallsvirtteesnlrefllqqLatLvsiv 160 
                   +++++ +l dp+  +h+++++e i ++++ lg++++p++  +i  ll  ++++++  +r   ++ +atLv++v
  EPX74092.1 1242 LVENIVPLLGDPTNITHRQGAIECIYQVVQRLGVRVLPYVLYLIIPLLGRMSDSDK-DVRTLATSSFATLVKLV 1314
                  578899999*****************************999999999999999888.9************9987 PP

>> TAF6_C  TAF6 C-terminal HEAT repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.015        27      21      63 ..      19      61 ..      12      73 .. 0.81
   2 ?    5.1   0.0     0.016        28      22      56 ..    1022    1056 ..     985    1069 .. 0.83
   3 ?   -3.3   0.0       6.6   1.2e+04      22      73 ..    1217    1266 ..    1213    1277 .. 0.62

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.015
      TAF6_C 21 aLRdfAAslLakilkkysssyktLkprvtrtllkvlldpkksl 63
                 +R+ AA+++a i k ++ +  +L  rv+  l +   d+   +
  EPX74092.1 19 VVREAAAKQIADIQKAHPVELYNLLGRVVPYLKSKNWDTRVAA 61
                58**************************998877666655555 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.016
      TAF6_C   22 LRdfAAslLakilkkysssyktLkprvtrtllkvl 56  
                   R  A  +++ i + y++s +++++++++ l+ ++
  EPX74092.1 1022 QRHSAMAMMKLISSCYKESRQNISEKIVKNLCAYV 1056
                  5889999*********************9987655 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 6.6
      TAF6_C   22 LRdfAAslLakilkkysssyktLkprvtrtllkvlldpkkslgtlyGallgl 73  
                  +R + A+ La++ +  +  +k L+  +++ +   l d  ++++   Ga+ ++
  EPX74092.1 1217 IRFMVAKCLASVSDSVTAGSKALRM-LVENIVPLLGD-PTNITHRQGAIECI 1266
                  5666777777777777777777764.34444444444.44555566666666 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.1      0.49   8.8e+02      30      49 ..       5      25 ..       2      26 .. 0.87
   2 ?    1.2   0.1      0.31   5.6e+02       1      17 [.      55      71 ..      55      74 .. 0.82
   3 ?   -0.2   0.0      0.87   1.6e+03       1      19 [.     378     397 ..     378     405 .. 0.76
   4 ?   -3.3   0.0       7.9   1.4e+04      27      46 ..     518     537 ..     516     542 .. 0.75
   5 ?   -1.0   0.0       1.5   2.7e+03      20      35 ..    1193    1208 ..    1180    1211 .. 0.78
   6 ?    5.7   0.0     0.012        21       3      54 ..    1217    1268 ..    1215    1269 .. 0.84
   7 ?    4.7   0.0     0.024        44      27      49 ..    1283    1304 ..    1273    1310 .. 0.71
   8 ?   -0.7   0.0       1.3   2.3e+03      22      39 ..    1584    1601 ..    1577    1603 .. 0.79

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.49
     HEAT_EZ 30 lpaLlalLnddsdeV.RaaAa 49
                l+ L+ lL + s +V R+aAa
  EPX74092.1  5 LDRLVVLLDNGSTSVvREAAA 25
                67899***99999999****8 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.31
     HEAT_EZ  1 wrvRraAawaLGrlagg 17
                w  R aAa a+G +a++
  EPX74092.1 55 WDTRVAAAKAIGGIAEN 71
                889********976665 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.87
     HEAT_EZ   1 wrvRraAawaLGr.laggep 19 
                 w++R++A+++L + + + ++
  EPX74092.1 378 WEIRHGACMGLREiIRFAGF 397
                 99*********547666555 PP

  == domain 4  score: -3.3 bits;  conditional E-value: 7.9
     HEAT_EZ  27 peilpaLlalLnddsdeVRa 46 
                 + +++  +++L + +d+VRa
  EPX74092.1 518 DSLIDIVIQGLANNDDDVRA 537
                 56666777888888889986 PP

  == domain 5  score: -1.0 bits;  conditional E-value: 1.5
     HEAT_EZ   20 ellqplvpeilpaLla 35  
                   +l +++++ilp Ll+
  EPX74092.1 1193 ADLCGYITDILPHLLP 1208
                  457779********96 PP

  == domain 6  score: 5.7 bits;  conditional E-value: 0.012
     HEAT_EZ    3 vRraAawaLGr...laggepellqplvpeilpaLlalLnddsdeV..RaaAagaLgn 54  
                  +R+ +a +L++       ++ +l+ lv+ i+p+L+     d+ ++  R+ A+ ++ +
  EPX74092.1 1217 IRFMVAKCLASvsdSVTAGSKALRMLVENIVPLLG-----DPTNIthRQGAIECIYQ 1268
                  6888888998888855568999*************.....99988899999999876 PP

  == domain 7  score: 4.7 bits;  conditional E-value: 0.024
     HEAT_EZ   27 peilpaLlalLnddsdeVRaaAa 49  
                    i+p+L+ +++d++++VR+ A 
  EPX74092.1 1283 YLIIPLLG-RMSDSDKDVRTLAT 1304
                  45778888.6667777***9996 PP

  == domain 8  score: -0.7 bits;  conditional E-value: 1.3
     HEAT_EZ   22 lqplvpeilpaLlalLnd 39  
                  l+  ++++lp+Ll++L+ 
  EPX74092.1 1584 LEAIHKQVLPFLLRRLKE 1601
                  566789*******99954 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.73   1.3e+03      61     107 ..       6      53 ..       2     111 .. 0.76
   2 ?   -0.6   0.3      0.65   1.2e+03      20      82 ..     518     584 ..     510     612 .. 0.60
   3 ?    4.5   0.3     0.018        33      59     145 ..     965    1056 ..     949    1064 .. 0.64
   4 ?    4.5   0.1     0.018        33      14      49 ..    1276    1311 ..    1269    1317 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.73
        Cnd1  61 selakll.eDenprVvanalaalteiseksenaiynllpdiisklsda 107
                 ++l  ll + + + V++ a   + +i++  + ++ynll  ++ +l+++
  EPX74092.1   6 DRLVVLLdNGSTSVVREAAAKQIADIQKAHPVELYNLLGRVVPYLKSK 53 
                 666667734445566667777888888888888888888888888753 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.65
        Cnd1  20 eylvepLrkrLkDedpyVRktaaivvakL....ilndmvkekgflselaklleDenprVvanalaal 82 
                 + l++ + ++L  +d  VR   a++++ +    +  ++   +++l+ l ++l+D ++  ++++ +++
  EPX74092.1 518 DSLIDIVIQGLANNDDDVRAVSALTLLPVadklVAGKLDSCRQLLNVLWDCLDDVKDDLSSSTASVM 584
                 5555666666777777777777777665533324444444455666666666666666555554443 PP

  == domain 3  score: 4.5 bits;  conditional E-value: 0.018
        Cnd1   59 flselaklleDenprVvanalaalteiseksenaiynllpdiisklsdalne.....csewgqitilefLlsyipkdkq.eaeslveklcprl 145 
                  ++s+  ++ +D+++++   + aal       e+ + + l  ii+ + +++++     +++ + + ++++++s+ ++++q   e++v++lc+ +
  EPX74092.1  965 LVSDEVSMYKDHKDTIDIQCAAALASGIVSYEK-LPKKLNPIIKGIMESIKKerfscLQRHSAMAMMKLISSCYKESRQnISEKIVKNLCAYV 1056
                  555556677888888888888888765554322.22233333333333333335555899999********9888888724678888888766 PP

  == domain 4  score: 4.5 bits;  conditional E-value: 0.018
        Cnd1   14 rvpnlveylvepLrkrLkDedpyVRktaaivvakLi 49  
                  rv   v yl+ pL  r++D+d  VR  a   +a L+
  EPX74092.1 1276 RVLPYVLYLIIPLLGRMSDSDKDVRTLATSSFATLV 1311
                  66667889*******************999988885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1957 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1033  (0.0576162); expected 358.6 (0.02)
Passed bias filter:                      527  (0.0293937); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 1.15u 0.32s 00:00:01.47 Elapsed: 00:00:00.51
# Mc/sec: 11532.57
//
Query:       EPX74093.1  [L=480]
Description: F-box protein Pof2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-16   60.1  30.3      0.035   14.5   0.6    8.8 10  LRR_4       Leucine Rich repeats (2 copies)
    3.8e-08   33.1   1.2    1.2e-07   31.4   1.2    1.9  1  F-box-like  F-box-like
    9.9e-06   25.4  29.6        9.2    7.3   0.0   11.9 10  LRR_1       Leucine Rich Repeat
    0.00013   21.8  37.3       0.68   10.1   0.1   11.7 12  LRR_6       Leucine Rich repeat
     0.0063   16.4   2.0        0.1   12.5   0.1    3.3  3  F-box       F-box domain
      0.009   15.6   0.2        2.5    7.8   0.0    2.6  2  STAS        STAS domain
  ------ inclusion threshold ------
      0.094   13.0   4.1       0.19   12.1   0.3    3.3  3  PRANC       PRANC domain
       0.11   12.4   3.6          9    6.2   0.0    3.2  4  F-box_4     F-box


Domain annotation for each model (and alignments):
>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   5.7     0.048   1.1e+02       5      39 ..      88     126 ..      87     145 .. 0.72
   2 !    8.2   1.7    0.0015       3.4       5      33 ..     140     172 ..     128     182 .. 0.77
   3 !   13.5   3.3   3.2e-05     0.072       1      39 [.     162     201 ..     162     211 .. 0.80
   4 !   13.2   0.0     4e-05      0.09       3      39 ..     215     256 ..     214     259 .. 0.86
   5 !   11.7   1.5   0.00013      0.28       1      38 [.     240     279 ..     240     287 .. 0.74
   6 !   14.5   0.6   1.6e-05     0.035       2      39 ..     268     309 ..     267     316 .. 0.86
   7 !   13.6   0.1     3e-05     0.067       1      39 [.     293     335 ..     293     343 .. 0.83
   8 !   12.0   0.0   9.8e-05      0.22       3      37 ..     321     359 ..     319     362 .. 0.84
   9 !   12.7   0.0     6e-05      0.13       2      40 ..     346     387 ..     345     393 .. 0.90
  10 ?    4.9   0.0     0.017        37       3      38 ..     399     435 ..     397     443 .. 0.65

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.048
                 EEE--SS---E-S-....HH..H-TT--EEE-.-S-----G CS
       LRR_4   5 vLdLsnNqltdipl....le..klpnLkeLdLsgNnlitdl 39 
                 +L+Ls   ++d+      l   k +nL  ++Lsg++++td 
  EPX74093.1  88 KLNLSY--VSDFVTdehlLLllKSKNLSRINLSGCTRLTDN 126
                 677777..776666444411457899999999999888775 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.0015
                 EEE--SS---E-S-...HH...H-TT--EEE-.-S CS
       LRR_4   5 vLdLsnNqltdipl...le...klpnLkeLdLsgN 33 
                 vLdLs+  + ++++   l+   kl++Lk+L+Ls++
  EPX74093.1 140 VLDLSG--IPSLSWktmLAalpKLKKLKTLSLSQC 172
                 577777..7777777773355589********987 PP

  == domain 3  score: 13.5 bits;  conditional E-value: 3.2e-05
                 SS--EEE--SS.---E-S-...HHH-TT--EEE-.-S-----G CS
       LRR_4   1 pnLevLdLsnN.qltdipl...leklpnLkeLdLsgNnlitdl 39 
                 ++L++L+Ls++  l d +l   l  +++Lk+L L  Nn i +l
  EPX74093.1 162 KKLKTLSLSQCvLLDDSQLketLVHCKHLKKLKL--NNCI-SL 201
                 69********977888888777779*********..4456.55 PP

  == domain 4  score: 13.2 bits;  conditional E-value: 4e-05
                 --EEE--SS.---E-S-HH....H-TT--EEE-.-S-----G CS
       LRR_4   3 LevLdLsnN.qltdiplle....klpnLkeLdLsgNnlitdl 39 
                 L++Ld+s++ +++d + l     k +nLkeL++sg+ ++t++
  EPX74093.1 215 LTELDISGCiNMKDPSVLIkvlmKHKNLKELNMSGCFYLTSF 256
                 99*****98899997776668878999********9888875 PP

  == domain 5  score: 11.7 bits;  conditional E-value: 0.00013
                 SS--EEE--SS-.--.E-S-...HHH-TT--EEE-.-S----- CS
       LRR_4   1 pnLevLdLsnNq.lt.dipl...leklpnLkeLdLsgNnlitd 38 
                 +nL++L+ s++  lt  i+    ++kl +L++L+L+g   ++ 
  EPX74093.1 240 KNLKELNMSGCFyLTsFIEYysfPSKLCSLRSLNLTG---LSE 279
                 69*******98458855555664668*********55...334 PP

  == domain 6  score: 14.5 bits;  conditional E-value: 1.6e-05
                 S--EEE--SS---E-S-...HH...H-TT--EEE-.-S-----G CS
       LRR_4   2 nLevLdLsnNqltdipl...le...klpnLkeLdLsgNnlitdl 39 
                 +L++L+L +  l+++++   l+    +p L+ L+L+ +n+itd 
  EPX74093.1 268 SLRSLNLTG--LSELSNhhvLKiceYFPRLQILYLTKCNKITDA 309
                 89*******..******877336647***************985 PP

  == domain 7  score: 13.6 bits;  conditional E-value: 3e-05
                 SS--EEE--.SS---E-S-..HHH-TT.--EEE-.-S-----G CS
       LRR_4   1 pnLevLdLs.nNqltdipl..leklpn.LkeLdLsgNnlitdl 39 
                 p+L++L+L   N++td  l  ++ l+  L++L+L ++n ++dl
  EPX74093.1 293 PRLQILYLTkCNKITDAALtgISYLKTyLTSLHLGHCNEVSDL 335
                 79*******7689999777654457778******999999998 PP

  == domain 8  score: 12.0 bits;  conditional E-value: 9.8e-05
                 --EEE--S.S---E-S-...HHH-TT--EEE-.-S---- CS
       LRR_4   3 LevLdLsn.Nqltdipl...leklpnLkeLdLsgNnlit 37 
                 L++L+L++ N ++d++    l+++ nL+++d  g+ ++t
  EPX74093.1 321 LTSLHLGHcNEVSDLGItrvLKSCRNLTYVDFGGCFRLT 359
                 89*****7368***999877778********98876665 PP

  == domain 9  score: 12.7 bits;  conditional E-value: 6e-05
                 S--EEE--SS.---E-S-..HHH-TT--EEE-.-S-----GG CS
       LRR_4   2 nLevLdLsnN.qltdipl..leklpnLkeLdLsgNnlitdld 40 
                 nL+++d++++ +ltd +   ++klp L+ + L  + ++td++
  EPX74093.1 346 NLTYVDFGGCfRLTDQSVaeIAKLPRLQRVGLVKCIFLTDIS 387
                 9*******999*******66669*****************97 PP

  == domain 10  score: 4.9 bits;  conditional E-value: 0.017
                 --EEE--SS.---..E-S-HH...H-TT--EEE-.-S----- CS
       LRR_4   3 LevLdLsnN.qlt..diplle...klpnLkeLdLsgNnlitd 38 
                 Le ++Ls +  lt  +i+  +   ++ nLk+L+++g   i++
  EPX74093.1 399 LERIHLSYCtGLTakSIS--YlmiNCRNLKHLSVTG---IGS 435
                 677777754367731333..24466*******9955...455 PP

>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4   1.2   5.6e-11   1.2e-07       3      48 .]      18      61 ..      17      61 .. 0.94

  Alignments for each domain:
  == domain 1  score: 31.4 bits;  conditional E-value: 5.6e-11
  F-box-like  3 rLPdEiLlqIFsyLppsdLlrlalVCrrWrrvaldtplLWrrlvlr 48
                +LP+Ei+ +I sy+++ +L+++  V+  W++ +   p +W +lv++
  EPX74093.1 18 SLPNEICYKIISYIDFPSLYNCLTVSPVWCQYI--LPTIWEKLVFK 61
                8********************************..568****9985 PP

>> LRR_1  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.4     0.085   1.9e+02       1      20 [.     111     128 ..     111     150 .. 0.84
   2 ?    4.7   0.2     0.029        65       1      13 [.     163     175 ..     163     187 .. 0.80
   3 ?    3.4   0.3     0.079   1.8e+02       1      12 [.     189     200 ..     189     211 .. 0.75
   4 !    6.1   0.0      0.01        22       2      13 ..     215     226 ..     214     236 .. 0.76
   5 !    7.3   0.0    0.0041       9.2       1      11 [.     241     251 ..     241     262 .. 0.87
   6 ?    1.2   0.3      0.41   9.3e+02       1       9 [.     268     276 ..     268     287 .. 0.78
   7 ?    1.7   0.0      0.28   6.4e+02       1      11 [.     294     304 ..     294     314 .. 0.83
   8 ?    2.0   0.1      0.22     5e+02       2      12 ..     321     331 ..     320     344 .. 0.79
   9 ?    3.6   0.1     0.065   1.4e+02       5       5 ..     389     389 ..     346     418 .. 0.54
  10 ?   -0.3   0.0       1.2   2.8e+03       1       9 [.     424     432 ..     424     445 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.085
       LRR_1   1 nLrhLdLsnnpllglppnsf 20 
                 nL +++Ls++   +l++n++
  EPX74093.1 111 NLSRINLSGCT--RLTDNTL 128
                 8999******9..5666665 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.029
       LRR_1   1 nLrhLdLsnnpll 13 
                 +L++L Ls++ ll
  EPX74093.1 163 KLKTLSLSQCVLL 175
                 7*********983 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.079
       LRR_1   1 nLrhLdLsnnpl 12 
                 +L++L L+n++ 
  EPX74093.1 189 HLKKLKLNNCIS 200
                 69********95 PP

  == domain 4  score: 6.1 bits;  conditional E-value: 0.01
       LRR_1   2 LrhLdLsnnpll 13 
                 L++Ld+s++++ 
  EPX74093.1 215 LTELDISGCINM 226
                 89*******984 PP

  == domain 5  score: 7.3 bits;  conditional E-value: 0.0041
       LRR_1   1 nLrhLdLsnnp 11 
                 nL++L++s+++
  EPX74093.1 241 NLKELNMSGCF 251
                 8*********9 PP

  == domain 6  score: 1.2 bits;  conditional E-value: 0.41
       LRR_1   1 nLrhLdLsn 9  
                 +Lr+L+L++
  EPX74093.1 268 SLRSLNLTG 276
                 69****977 PP

  == domain 7  score: 1.7 bits;  conditional E-value: 0.28
       LRR_1   1 nLrhLdLsnnp 11 
                 +L+ L+L+ ++
  EPX74093.1 294 RLQILYLTKCN 304
                 69*******98 PP

  == domain 8  score: 2.0 bits;  conditional E-value: 0.22
       LRR_1   2 LrhLdLsnnpl 12 
                 L++L+L++++ 
  EPX74093.1 321 LTSLHLGHCNE 331
                 99*******84 PP

  == domain 9  score: 3.6 bits;  conditional E-value: 0.065
       LRR_1   5 L 5  
                 +
  EPX74093.1 389 I 389
                 1 PP

  == domain 10  score: -0.3 bits;  conditional E-value: 1.2
       LRR_1   1 nLrhLdLsn 9  
                 nL+hL +++
  EPX74093.1 424 NLKHLSVTG 432
                 8****9865 PP

>> LRR_6  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.3      0.12   2.6e+02       2      18 ..     109     126 ..     108     132 .. 0.83
   2 ?   -2.2   0.2       2.8   6.3e+03       2      12 ..     135     145 ..     134     145 .. 0.76
   3 ?    3.3   0.2     0.048   1.1e+02       3      17 ..     162     177 ..     160     178 .. 0.80
   4 ?    1.2   1.2      0.22   4.9e+02       1      13 [.     186     198 ..     186     198 .. 0.90
   5 ?    3.1   0.0     0.054   1.2e+02       5      13 ..     215     223 ..     214     229 .. 0.94
   6 ?    3.9   0.1     0.031        70       3      13 ..     240     250 ..     238     250 .. 0.88
   7 ?    2.6   0.5     0.078   1.8e+02       2      12 ..     266     276 ..     265     282 .. 0.86
   8 ?    4.0   0.0     0.027        62       4      23 ..     294     314 ..     293     315 .. 0.79
   9 !   10.1   0.1    0.0003      0.68       3      20 ..     319     337 ..     317     340 .. 0.90
  10 ?    4.1   0.0     0.025        57       1      23 [.     343     366 ..     343     367 .. 0.83
  11 ?    2.3   0.0     0.096   2.1e+02       2      23 ..     396     418 ..     395     419 .. 0.82
  12 ?    1.8   0.1      0.15   3.3e+02       1      12 [.     421     432 ..     421     432 .. 0.88

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.12
       LRR_6   2 nthLteLdLsgNd.IgDe 18 
                 + +L   +Lsg+  ++D 
  EPX74093.1 109 SKNLSRINLSGCTrLTDN 126
                 5689999*****999995 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 2.8
       LRR_6   2 nthLteLdLsg 12 
                 n +   LdLsg
  EPX74093.1 135 NLNTVVLDLSG 145
                 6677789*996 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.048
       LRR_6   3 thLteLdLsgNd.IgD 17 
                  +L++L+Ls +  ++D
  EPX74093.1 162 KKLKTLSLSQCVlLDD 177
                 58*******9985555 PP

  == domain 4  score: 1.2 bits;  conditional E-value: 0.22
       LRR_6   1 snthLteLdLsgN 13 
                 ++ hL++L L+ +
  EPX74093.1 186 HCKHLKKLKLNNC 198
                 799******9987 PP

  == domain 5  score: 3.1 bits;  conditional E-value: 0.054
       LRR_6   5 LteLdLsgN 13 
                 LteLd+sg+
  EPX74093.1 215 LTELDISGC 223
                 9******99 PP

  == domain 6  score: 3.9 bits;  conditional E-value: 0.031
       LRR_6   3 thLteLdLsgN 13 
                  +L+eL++sg+
  EPX74093.1 240 KNLKELNMSGC 250
                 69*******98 PP

  == domain 7  score: 2.6 bits;  conditional E-value: 0.078
       LRR_6   2 nthLteLdLsg 12 
                  ++L++L+L+g
  EPX74093.1 266 LCSLRSLNLTG 276
                 589******97 PP

  == domain 8  score: 4.0 bits;  conditional E-value: 0.027
       LRR_6   4 hLteLdLsgNd.IgDeGaeaL 23 
                  L+ L L+ ++ I+D+ ++ +
  EPX74093.1 294 RLQILYLTKCNkITDAALTGI 314
                 588899999999***977655 PP

  == domain 9  score: 10.1 bits;  conditional E-value: 0.0003
       LRR_6   3 thLteLdLsgNd.IgDeGa 20 
                 t+Lt+L+L +++ ++D G+
  EPX74093.1 319 TYLTSLHLGHCNeVSDLGI 337
                 89**************997 PP

  == domain 10  score: 4.1 bits;  conditional E-value: 0.025
       LRR_6   1 snthLteLdLsgNd.IgDeGaeaL 23 
                 s+++Lt++d  g+  ++D+ +  +
  EPX74093.1 343 SCRNLTYVDFGGCFrLTDQSVAEI 366
                 699**********88888877666 PP

  == domain 11  score: 2.3 bits;  conditional E-value: 0.096
       LRR_6   2 nthLteLdLsgNd.IgDeGaeaL 23 
                 ++ L+  +Ls++  ++ + ++ L
  EPX74093.1 396 SRFLERIHLSYCTgLTAKSISYL 418
                 6889********99998877665 PP

  == domain 12  score: 1.8 bits;  conditional E-value: 0.15
       LRR_6   1 snthLteLdLsg 12 
                 ++++L++L+++g
  EPX74093.1 421 NCRNLKHLSVTG 432
                 699******985 PP

>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   0.1   4.7e-05       0.1       5      37 ..      18      50 ..      17      51 .. 0.96
   2 ?    1.3   0.0      0.15   3.4e+02       3      29 ..     277     303 ..     275     306 .. 0.86
   3 ?   -2.1   0.0       1.7   3.8e+03      18      34 ..     383     399 ..     381     402 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 4.7e-05
                HS-HHHHHHHHHTS-HHHHHHHCTT-HHHHHHH CS
       F-box  5 rLPsevlrhILerLplsdllalrrVSkgwrili 37
                +LP+e+  +I+++ ++ +l ++  VS  w ++i
  EPX74093.1 18 SLPNEICYKIISYIDFPSLYNCLTVSPVWCQYI 50
                7****************************9998 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.15
                 HHHS-HHHHHHHHHTS-HHHHHHHCTT CS
       F-box   3 lsrLPsevlrhILerLplsdllalrrV 29 
                 ls+L+++ +++I e+ p   +l l ++
  EPX74093.1 277 LSELSNHHVLKICEYFPRLQILYLTKC 303
                 799**************9999877666 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 1.7
                 S-HHHHHHHCTT-HHHH CS
       F-box  18 LplsdllalrrVSkgwr 34 
                 L  ++++ l+ +S ++ 
  EPX74093.1 383 LTDISIIHLSNCSSRFL 399
                 66788999999999885 PP

>> STAS  STAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.3   0.0    0.0063        14      44      62 ..     132     150 ..      54     205 .. 0.76
   2 !    7.8   0.0    0.0011       2.5      43      69 ..     403     436 ..     335     439 .. 0.80

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0063
                 ....-SEEEEEEEEEEEE- CS
        STAS  44 kkeslkslildlsavsfiD 62 
                   ++l++++ldls+++ ++
  EPX74093.1 132 VLNNLNTVVLDLSGIPSLS 150
                 44579**********9987 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0011
                 ............-SEEEEEEEEEEEE-HHHHHHH CS
        STAS  43 e.......kkeslkslildlsavsfiDssGvraL 69 
                 +       + +s+++l +++ ++ +++++G++++
  EPX74093.1 403 HlsyctglTAKSISYLMINCRNLKHLSVTGIGSI 436
                 144444447889*******************976 PP

>> PRANC  PRANC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.3   8.5e-05      0.19      62      94 ..       6      38 ..       3      41 .. 0.82
   2 ?    0.5   0.1      0.34   7.6e+02       3      51 ..     166     212 ..     164     247 .. 0.80
   3 ?   -3.9   0.0         8   1.8e+04      11      26 ..     463     478 ..     461     479 .. 0.64

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 8.5e-05
       PRANC 62 lnnicskkslWnlLPiEIkykIleyLndkdLkn 94
                ++ +c+  s  n+LP+EI ykI++y++  +L+n
  EPX74093.1  6 IQFTCKMMSFNNSLPNEICYKIISYIDFPSLYN 38
                5566777777799*************9988887 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.34
       PRANC   3 rvslydllfnknninllvrlinkkklkklkslkiYgklikkiiksakkr 51 
                 ++sl + ++ +++ +l   l++ k+lkkl +l+++ +l +k+++++++ 
  EPX74093.1 166 TLSLSQCVLLDDS-QLKETLVHCKHLKKL-KLNNCISLTEKTLQTLSEH 212
                 6777777888888.888999999999888.7777777777777777765 PP

  == domain 3  score: -3.9 bits;  conditional E-value: 8
       PRANC  11 fnknninllvrlinkk 26 
                 f++++i+l +++in+k
  EPX74093.1 463 FTREEIELFRNYINQK 478
                 5556667777777765 PP

>> F-box_4  F-box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0     0.004         9       6      34 ..      17      45 ..      12      65 .. 0.87
   2 ?   -2.7   0.2       2.4   5.3e+03      88     113 ..     176     201 ..     161     204 .. 0.67
   3 ?    5.7   0.0    0.0058        13      70     104 ..     258     294 ..     233     298 .. 0.82
   4 ?   -3.8   0.0         5   1.1e+04      19      34 ..     382     397 ..     380     401 .. 0.70

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.004
     F-box_4  6 ssLPlevlqhiaslLDsfsLsqLslvskl 34
                +sLP e+  +i+s++D  sL++   vs  
  EPX74093.1 17 NSLPNEICYKIISYIDFPSLYNCLTVSPV 45
                58*******************99988865 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 2.4
     F-box_4  88 dvsslseHLkkCpfyererktepvaL 113
                 d s+l e L +C++ ++ + ++ + L
  EPX74093.1 176 DDSQLKETLVHCKHLKKLKLNNCISL 201
                 45667777777777776666655555 PP

  == domain 3  score: 5.7 bits;  conditional E-value: 0.0058
     F-box_4  70 kvwefstlfskvksWkfedvsslseH..LkkCpfyer 104
                 + ++f+++ ++++s +++  s+ls+H  Lk C+++ r
  EPX74093.1 258 EYYSFPSKLCSLRSLNLTGLSELSNHhvLKICEYFPR 294
                 569**********************989999***965 PP

  == domain 4  score: -3.8 bits;  conditional E-value: 5
     F-box_4  19 lLDsfsLsqLslvskl 34 
                 +L ++s+++Ls  s++
  EPX74093.1 382 FLTDISIIHLSNCSSR 397
                 5677777777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (480 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       481  (0.026828); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.55u 0.29s 00:00:00.84 Elapsed: 00:00:00.46
# Mc/sec: 3154.32
//
Query:       EPX74094.1  [L=308]
Description: usp family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      5e-23   82.2   0.0    7.8e-23   81.5   0.0    1.2  1  Usp       Universal stress protein family


Domain annotation for each model (and alignments):
>> Usp  Universal stress protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.5   0.0   4.4e-27   7.8e-23       3     141 .]     141     278 ..     140     278 .. 0.96

  Alignments for each domain:
  == domain 1  score: 81.5 bits;  conditional E-value: 4.4e-27
                 SEEEEEE-SSHHHHHHHHHHHHHHHHCTSEEEEEEEEESSHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEESSHHHHHHHHHHH CS
         Usp   3 krIlVavDgseeskkAlewAlelakargaelillhvidprasgavsdadeeaeeeeleleeaeleadaakaaaeaggvkvevvveegdpaeeilevaee 101
                 ++ l+++Dg+ +s+ A+e+ +e + ++++e+++l+vidp+++ a+  +de ++++ +e   a+l     k+  e++ v+  v++++g+p ++il++   
  EPX74094.1 141 RTFLCGMDGNLYSEFAVEYLFESLLSDNDEVVILRVIDPSSKMAEELSDENSYRQMAENVMATLL----KKIDEEKAVSIIVELVVGKPQDMILRTIHT 235
                 789*************************************************************8....578*************************** PP

                 TTSSEEEEESCC..SSTTTTCS.SBHHHHHHHHHTSSEEEEEE CS
         Usp 102 edadliVvGsrg..rsglsrll.lGSvseyvlrhapcpVlvVr 141
                 +++d ++vG+rg  +++++ ll  GSvs+ +l+++p+pV+vVr
  EPX74094.1 236 YSPDSLIVGTRGkpLNSFQSLLsSGSVSKFCLQRSPIPVIVVR 278
                 ************998888886669******************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (308 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       792  (0.0441742); expected 358.6 (0.02)
Passed bias filter:                      563  (0.0314016); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 2084.71
//
Query:       EPX74095.1  [L=618]
Description: cytoplasmic arginine-tRNA ligase Rrs1/Mrs1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.2e-105  353.3   4.0   1.6e-105  352.9   4.0    1.1  1  tRNA-synt_1d     tRNA synthetases class I (R)
    3.8e-28   98.0   0.9    1.1e-27   96.6   0.2    2.1  2  DALR_1           DALR anticodon binding domain
    0.00091   19.8   0.0     0.0036   17.9   0.0    2.0  2  Arg_tRNA_synt_N  Arginyl tRNA synthetase N terminal domain
  ------ inclusion threshold ------
      0.011   15.6   0.3       0.09   12.6   0.1    2.1  2  POT1             Telomeric single stranded DNA binding POT1/C


Domain annotation for each model (and alignments):
>> tRNA-synt_1d  tRNA synthetases class I (R)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  352.9   4.0  3.5e-109  1.6e-105      13     349 .]     134     487 ..     121     487 .. 0.95

  Alignments for each domain:
  == domain 1  score: 352.9 bits;  conditional E-value: 3.5e-109
                   .---SST-EEEEE----BTTS--BHHHHHHHHHHHHHHHHHHHCT-EEEEEE--B-SSTCHHHHHHHHHHHTTTTTTS-----SCCCHHHHHHHHCC CS
  tRNA-synt_1d  13 qkksrekkkvvvdfssPniakemhvGhLrstiiGdavsrlleflGydvirlnhvGDWGtqfGlLiaylekkqdekllqeqelqdLeafykeakkdyd 109
                   +++s++ k  v dfssPniak++h+GhLrstiiG ++++l+e  G++v r+n++GDWG+qfGlL++++e+++++k l+e+++ +L ++y++++ d  
    EPX74095.1 134 RNESGKGKVAVFDFSSPNIAKPFHAGHLRSTIIGSFLANLHESQGWKVHRVNYLGDWGKQFGLLAIGFERYGNDKELEENPMRHLYDVYVKINADAT 230
                   456667777799***********************************************************************************99 PP

                   CSHC.....................CCHHHHHHHHHHHCT-HHHHHHHHHHHHHHHHHHHHHHHHCT---EC.--CC.CCCCCHHHHHHHHHCTT-E CS
  tRNA-synt_1d 110 eeei.....................faerarnyvvkLqsgdedirklwkllvditrtelqklydrldvtlie.rGes.lykeslneivkelkkkglv 183
                    ee+                     + ++ar++++++++gde+  k w++  +++  +l+++y+rl++   e  Ges ++ + ++e++++lk+k+lv
    EPX74095.1 231 AEEEkiqqesaeaeskgvpytpfttLHGKAREFFKHMEAGDEQSLKTWSRFRELSIVKLKQTYERLNIEYDEyDGESqVSLPLMDEMIEILKQKNLV 327
                   98888*******************99********************************************9989*********************** PP

                   EECTTCEEEEECCCTSSCCE.ECC-TTS-B-HHHHHHHHHHHHHHTT--SEEEEEEECCCHHHHHHHHHHHHCTTSSTT.TSEEEEEEE--EE-TTS CS
  tRNA-synt_1d 184 kesdGalvvfldefgkrlgv.vvqksDGgylytttDiaaakerkeelkadkvlyvidsrqslhlqqiflilkkigyvpe.skdlehanfGmvlgkdk 278
                   ++++Gal+v+l++f k+lg  vv+k+DG++ly+t+Di++a +r+++ ++dk +yv+ s+q++++ q+f il  +g+  e +k+  h+n+G+v     
    EPX74095.1 328 EQDNGALLVDLTKFDKKLGKaVVRKKDGATLYLTRDIGTALKRYQKYHFDKSVYVVASQQDMYFAQLFKILELMGF--EwAKKCVHINYGLV----- 417
                   *******************99*******************************************************..6599**********..... PP

                   SBSBCSSSTC-BHHHHHHHHHHHHHHHHCCCCCCTS-CCCCHCHHHHHHHHHHHHCCCCTS-TTS-EE--H CS
  tRNA-synt_1d 279 kkfktrkGetvkLadlLdealeralqlikeknkdkvlqadelekvaeavgvgaikyaDlsknrindyifdw 349
                   ++++trkG+ ++L+d+++ a e  ++++++kn++k +q +++e+va+ vg +ai+++D   +rin+y fdw
    EPX74095.1 418 QGMSTRKGKAIFLDDIMEVAKEE-MHKVMQKNEEKYSQIENPEEVADIVGKTAIRIQDSTGKRINNYAFDW 487
                   *****************988776.566*******************************************9 PP

>> DALR_1  DALR anticodon binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.65   2.9e+03      30      54 ..     326     350 ..     312     387 .. 0.77
   2 !   96.6   0.2   2.4e-31   1.1e-27       1     119 []     501     618 .]     501     618 .] 0.98

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.65
                 S-SHHHHHHHHHHHTHHHHHHHHHH CS
      DALR_1  30 leeeeekeLlkalaqfpevleeaae 54 
                 l e++  +Ll  l +f + l +a+ 
  EPX74095.1 326 LVEQDNGALLVDLTKFDKKLGKAVV 350
                 4678899999999999998888764 PP

  == domain 2  score: 96.6 bits;  conditional E-value: 2.4e-31
                 HHHHHHHHHHHHHHTTCTTCCCCHCCHCCS-SHHHHHHHHHHHTHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHHHCTSTTSCTHHH.HHHHHHHHH CS
      DALR_1   1 vqyahaRiksilrkaeeegekleeealalleeeeekeLlkalaqfpevleeaaeelephklaeylyeLaatfhkfYnkervlkeeeeelaaaRLaLvka 99 
                 +qyah+R++s+ r+ +  +e+ ++++l+l++e++  eL++ l q+p+vl++a++ +e+++l++yl++L ++++k Y+  +v + ee+ +  aRLaL+ a
  EPX74095.1 501 LQYAHSRLSSVQRNVNFTDEQMKNADLSLITEPDAYELVRLLGQYPDVLKSAFRFQETSTLVTYLFKLTHAVSKLYDILWVKGREENLQ-LARLALFGA 598
                 6****************************9999**************************************************999976.********* PP

                 HHHHHHHHHHHTT----S-- CS
      DALR_1 100 vrqvLangLdlLGieapekm 119
                 ++qvL+ng++lLG++++e+m
  EPX74095.1 599 AKQVLNNGMRLLGLTPLERM 618
                 *******************9 PP

>> Arg_tRNA_synt_N  Arginyl tRNA synthetase N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   7.9e-07    0.0036       3      76 ..      35     102 ..      33     112 .. 0.86
   2 ?   -2.2   0.1       1.4   6.4e+03       9      35 ..     439     462 ..     432     480 .. 0.61

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 7.9e-07
                      HHHHHHHHHHHHHSS-HHHHGGG-E-.SSGGG-SEEEEGGGG--TT-..-HHHHHHHHHHT---TTTEEEEEEE CS
  Arg_tRNA_synt_N   3 lkeaiaealkkaagadleeeeiviekpknpkfGDyatnvamqlakklkknPreiAeeiaeklekseiiekveva 76 
                      +++ i+ +l+k++g d++ + +++e++ +++ +D+ ++v  +  ++ + +P+e+A+++ae+++k      veva
       EPX74095.1  35 YRSYISTELSKISGVDASLIYPALETSISKDSADLNLPV--PRLRAKGGKPQELAAKWAEEFPKGL----VEVA 102
                      5778999******99********************9997..7888889**************9987....4444 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1.4
                      HHHHHHHSS-HHHHGGG-E-.SSGGG- CS
  Arg_tRNA_synt_N   9 ealkkaagadleeeeiviekpknpkfG 35 
                      e+++k+  +++ee+  +ie+p  ++ +
       EPX74095.1 439 EEMHKV-MQKNEEKYSQIENP--EEVA 462
                      555555.44666667777753..3344 PP

>> POT1  Telomeric single stranded DNA binding POT1/CDC13
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.13   5.9e+02      62      91 ..     280     308 ..     279     311 .. 0.93
   2 ?   12.6   0.1     2e-05      0.09      64     124 ..     453     512 ..     438     527 .. 0.81

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.13
                 CCCCCCCGGCCCCEEECCCCEEEESTTSCE CS
        POT1  62 nfedLpivkkvgdiirlhraklqsyngepq 91 
                 +f++L+iv k+++ +   ++++  y+ge q
  EPX74095.1 280 RFRELSIV-KLKQTYERLNIEYDEYDGESQ 308
                 799*****.******************988 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 2e-05
                 CCCCCGGCCCCEEECCCCEEEESTTSCECCSEEEEEEECCCTTSCEEEEECCCCCSTSTTC CS
        POT1  64 edLpivkkvgdiirlhraklqsyngepqglanigfssswalFngnlnailletppilsskf 124
                 ++   +++v di+  + +++q   g++++++ +++s + + F+g+++  l +++ +lss +
  EPX74095.1 453 SQIENPEEVADIVGKTAIRIQDSTGKRINNYAFDWS-RMTSFEGDTGPYLQYAHSRLSSVQ 512
                 55666779****************************.6*********66677776666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (618 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       845  (0.0471303); expected 358.6 (0.02)
Passed bias filter:                      545  (0.0303977); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.61u 0.31s 00:00:00.92 Elapsed: 00:00:00.46
# Mc/sec: 4010.91
//
Query:       EPX74096.1  [L=126]
Description: hypothetical protein SOCG_03310 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       312  (0.017402); expected 358.6 (0.02)
Passed bias filter:                      253  (0.0141112); expected 358.6 (0.02)
Passed Vit filter:                         5  (0.000278878); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.28s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 900.00
//
Query:       EPX74097.1  [L=641]
Description: microtubule-associated protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.03   14.0   0.0         16    5.1   0.0    3.4  3  DUF4197   Protein of unknown function (DUF4197)


Domain annotation for each model (and alignments):
>> DUF4197  Protein of unknown function (DUF4197)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0    0.0055        98      10      51 ..     358     399 ..     352     405 .. 0.83
   2 ?    5.1   0.0   0.00092        16      17      56 ..     404     443 ..     401     461 .. 0.87
   3 ?    1.9   0.0    0.0086   1.5e+02       8      50 ..     509     551 ..     504     563 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.0055
     DUF4197  10 glkeaLelGakkavsqlgkedGflkneavkiplPeelqkvek 51 
                 g+++  +  a+++ s+l ++++ +kn++ ki  P+++++v++
  EPX74097.1 358 GVRSPPTSTAHRSPSRLEQTGASIKNSSAKIVRPSTAADVRS 399
                 556666677888999*********************999987 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.00092
     DUF4197  17 lGakkavsqlgkedGflkneavkiplPeelqkvektlrkl 56 
                 ++a++  s+lg++++ lkn+++k++ P +++ v++ +r++
  EPX74097.1 404 TSATRTPSRLGQTGAALKNPNIKVLRPGTAAGVHSSARSI 443
                 56788889*************************9999987 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.0086
     DUF4197   8 asglkeaLelGakkavsqlgkedGflkneavkiplPeelqkve 50 
                 a+g+++  + +a +a s+l +++  +kn++ ki+ P +++ v+
  EPX74097.1 509 AAGIRSPSRAAAPRAPSRLEQTGVIVKNSSAKIMRPGTASGVR 551
                 5788888899999***********************9988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (641 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       996  (0.0555525); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.32s 00:00:00.98 Elapsed: 00:00:00.46
# Mc/sec: 4188.32
//
Query:       EPX74098.1  [L=290]
Description: BTB/POZ domain-containing protein Btb2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.9e-05   23.5   0.1    0.00027   21.1   0.0    2.1  2  BTB       BTB/POZ domain


Domain annotation for each model (and alignments):
>> BTB  BTB/POZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0   1.5e-08   0.00027       5     100 ..      37     133 ..      33     155 .. 0.82
   2 ?   -0.3   0.0     0.066   1.2e+03      64      88 ..     179     202 ..     172     219 .. 0.75

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 1.5e-08
                 HHHTTTS-EEEEETTTEEEEE-HHHHHHH-HHHHHHHTST...TTTTCCCE...EEEETTSGHHHHHHHHHHHHHSEEEC-CGGGHHHHHHHHHHHT-H CS
         BTB   5 resgelcDvtlvvgdgkefkahkavLaarSpyFkalftsk...eieessvs...eielddvepeafealLefiYtgeleitseenleelLaaadllqip 97 
                 + +g+++D  l+++d   ++ h ++L arSp++++ +t+    +      +   eie + v+ ++   +L+ +Y++ ++i+ e n   +La+  ll ++
  EPX74098.1  37 FLQGTFSDTNLQIQD-NVYRLHALFL-ARSPVLYQKITEVssnG---MPYNvklEIEDPYVTKKSTIFVLSSLYRDAVTIPAELNPCCILATSALLGLD 130
                 56899*********5.7777777776.79********9994432...3333556999999********************9888888889998999988 PP

                 HHH CS
         BTB  98 rlk 100
                  l+
  EPX74098.1 131 GLA 133
                 876 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.066
                 HHHHHHHHHHSEEEC-CGGGHHHHH CS
         BTB  64 fealLefiYtgeleitseenleelL 88 
                 f++ Le++Yt  l+   +++ +++L
  EPX74098.1 179 FDKALEVMYTTLLNHW-DKEYVNVL 202
                 6677999999888775.55555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       318  (0.0177366); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 2047.65
//
Query:       EPX74099.1  [L=328]
Description: rRNA processing protein Mis3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-31  108.0   0.0    3.7e-31  107.1   0.0    1.5  1  KH_8      Krr1 KH1 domain


Domain annotation for each model (and alignments):
>> KH_8  Krr1 KH1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.1   0.0     2e-35   3.7e-31       1      81 []      52     132 ..      52     132 .. 0.99

  Alignments for each domain:
  == domain 1  score: 107.1 bits;  conditional E-value: 2e-35
        KH_8   1 SsfevlfpkyrekylkeveekikklleekklklevdlkerslkvsTtekTrDPyiilkardlikLisrgvpleeakkvleD 81 
                 Ssf +lfpkyrekyl+ev+++++++l+++ + + +dl e+s++v+Tt+kT+DPy il ard+ikL+sr+vp+ +a k+++D
  EPX74099.1  52 SSFATLFPKYREKYLREVWPHVTRALDKYGIACVLDLVEGSMTVKTTRKTFDPYAILDARDMIKLLSRSVPFPQAIKIMQD 132
                 89*****************************************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1808  (0.100842); expected 358.6 (0.02)
Passed bias filter:                      719  (0.0401026); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 2270.17
//
Query:       EPX74100.1  [L=331]
Description: GTPase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.7e-14   53.9   0.0    6.2e-13   48.8   0.0    2.3  2  MMR_HSR1     50S ribosome-binding GTPase
    1.4e-09   37.6   0.0    7.7e-08   32.0   0.0    2.2  2  FeoB_N       Ferrous iron transport protein B
    4.3e-05   22.9   0.0    7.4e-05   22.2   0.0    1.4  1  AIG1         AIG1 family
    0.00045   20.2   0.1     0.0012   18.8   0.1    1.9  1  RsgA_GTPase  RsgA GTPase
  ------ inclusion threshold ------
      0.015   15.4   1.2       0.11   12.6   0.1    2.7  3  Dynamin_N    Dynamin family
      0.016   14.3   0.2      0.043   12.9   0.0    1.7  2  IIGP         Interferon-inducible GTPase (IIGP)
      0.056   13.8   0.0       0.25   11.7   0.0    1.9  2  AAA_16       AAA ATPase domain


Domain annotation for each model (and alignments):
>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0     0.049   1.3e+02      65     114 .]      25      71 ..      17      71 .. 0.73
   2 !   48.8   0.0   2.4e-16   6.2e-13       2      98 ..     150     267 ..     149     287 .. 0.63

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.049
                 HHHHHHHHHHCTSEEEEEEETTTTCSHHHHHHHHHHHHHTTSEEEEEEES CS
    MMR_HSR1  65 glgkaflaleeadlillvvdaseeklkpldeeleelleeakkplilvlnk 114
                  l+k  l   ++d+++ v da+   l+  +  +e++l+  kk+ i+v+nk
  EPX74100.1  25 TLKKLQLLSSKTDILVEVRDAR-IPLTSRNFAVESILR--KKNRIIVYNK 71 
                 344444445668********88.678888899999996..7889999998 PP

  == domain 2  score: 48.8 bits;  conditional E-value: 2.4e-16
                 EEEEESTTSSHHHHHHHHHT......STEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSS..HHHHHHHHHHHHHH........HHC.TSEEEEEE CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltg......ekaivsdkpgtTrdinegrvklkgkeielvDtpGlie..gaseekglgkafla........lee.adlillvv 83 
                 v +vG+pN+GKS+++n+l        ++ai++++pg+T++  e    l++ e+ ++DtpG++    as e +l+ ++              +d +l+ +
  EPX74100.1 150 VYFVGMPNTGKSSILNSLRHvslrrsKAAITGNHPGVTKHFSEVVRLLDDAEVFMLDTPGIMTpsIASPEDMLKLSLVGcvkeglidSVTlVDYLLFRI 248
                 89****************85555543478************887544788**********753332333333333333321112211222356666666 PP

                 ETT.....TTCSHHHHHHHH CS
    MMR_HSR1  84 das.....eeklkpldeele 98 
                 ++      + k++p  +++ 
  EPX74100.1 249 NLVdpsiyS-KWSPPTNDVD 267
                 655555531.3444444444 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0     0.018        47      72     118 ..      29      75 ..      21      84 .. 0.87
   2 !   32.0   0.0     3e-11   7.7e-08       2      70 ..     149     223 ..     148     252 .. 0.81

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.018
                 HHHHCTSSSEEEEEEEGGGHHHHHHHHHHHHHTTSSEEEEEETHHHH CS
      FeoB_N  72 dflleeepdvvvnvvdatnlernLyLtlqllelgvpvvlalnmidea 118
                   ll++++d++v+v da     +  + ++ +  +++ +++ n++d a
  EPX74100.1  29 LQLLSSKTDILVEVRDARIPLTSRNFAVESILRKKNRIIVYNKCDLA 75 
                 568999************99888889999999999999999999976 PP

  == domain 2  score: 32.0 bits;  conditional E-value: 3e-11
                 EEEEEESTTSSHHHHHHHHHTTSEE......EEESTTSSSEEEEEEEEETTEEEEEEE----SSSSSSSHHHHHH CS
      FeoB_N   2 tvalvGnpnvGkttlfnaltgakqk......vgNwpGvtvekkegklklkgkeveivDlPGiYslsayseeekva 70 
                 +v +vG pn+Gk++++n+l  ++ +       gN+pGvt   +e+   l++ ev ++D PGi + s  s e+ + 
  EPX74100.1 149 HVYFVGMPNTGKSSILNSLRHVSLRrskaaiTGNHPGVTKHFSEVVRLLDDAEVFMLDTPGIMTPSIASPEDMLK 223
                 6899*************997654322222337**************999*************9988888887665 PP

>> AIG1  AIG1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.0   2.9e-08   7.4e-05       4      76 ..     151     229 ..     148     252 .. 0.82

  Alignments for each domain:
  == domain 1  score: 22.2 bits;  conditional E-value: 2.9e-08
                 EEESSTTSSHHHHHHHH....HTS--SS--TTTS---SS-EEEEEEETTEEEEEEE--SCCCTTC.C.HHCHHHHHHHH CS
        AIG1   4 vlvGktgnGkSaTgNsi....lgkkaFesklsaqsvtkkcqkksrtwdgkkinViDTPglfdlsv.s.adkiskeivrc 76 
                   vG   +GkS+  Ns+    l+++      ++ +vtk++++++r  d+ ++   DTPg++  s  s +d ++ + v c
  EPX74100.1 151 YFVGMPNTGKSSILNSLrhvsLRRSKAAITGNHPGVTKHFSEVVRLLDDAEVFMLDTPGIMTPSIaSpEDMLKLSLVGC 229
                 579999***********9999999999999999**************************98766424144444455555 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.1   4.6e-07    0.0012     101     165 ..     149     214 ..      52     216 .. 0.88

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 4.6e-07
                  EEEEECSTTSSHHHHHHHHCT.T-----S---.-----------SEEEEEETTTEEEESS-SSSS-- CS
  RsgA_GTPase 101 tsvlvGqSGvGKStLinallp.elelktgevs.eklgrGkhTTtavellelaegglliDtPGfreld 165
                   + +vG    GKS+++n+l+  +l+ + +++  ++ g  kh +  v+ll+ a + ++ DtPG+ +++
   EPX74100.1 149 HVYFVGMPNTGKSSILNSLRHvSLRRSKAAITgNHPGVTKHFSEVVRLLDDA-EVFMLDTPGIMTPS 214
                  46799***************96555555555515567889********9998.9*********8876 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       2.3     6e+03     130     163 ..      37      68 ..      29      72 .. 0.53
   2 ?   12.6   0.1   4.2e-05      0.11       1      34 [.     150     182 ..     150     195 .. 0.82
   3 ?   -0.1   0.0      0.32   8.2e+02      99     113 ..     198     212 ..     193     223 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 2.3
                 EEEEEEEETTS-CCC-CHHHHHHHHSTTBTTEEE CS
   Dynamin_N 130 diilavtsanhdlsnsealflarevdpkgkrtiv 163
                 di++ v +a   l+   + f  +++  k+ r+iv
  EPX74100.1  37 DILVEVRDARIPLT--SRNFAVESILRKKNRIIV 68 
                 55555555555555..445555555555555443 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 4.2e-05
                 EEEEEBTTTTHHHHHHHHHTS--S---SSS---S CS
   Dynamin_N   1 iavvGsqSsGKSSvlnaLlgedilprgpnptTrr 34 
                 + +vG+ + GKSS+ln+L +   l r++  +T +
  EPX74100.1 150 VYFVGMPNTGKSSILNSLRHVS-LRRSKAAITGN 182
                 5689**************9999.77777666654 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.32
                 TS-SEEEEE---B-S CS
   Dynamin_N  99 lvkgltlvDlPGlds 113
                 ++ ++ ++D+PG+  
  EPX74100.1 198 DDAEVFMLDTPGIMT 212
                 5678999*****965 PP

>> IIGP  Interferon-inducible GTPase (IIGP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.1      0.16     4e+02     113     184 ..      70     143 ..      48     147 .. 0.70
   2 ?   12.9   0.0   1.7e-05     0.043      32      99 ..     144     213 ..     128     226 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.16
                 GG-SEEEEE..ESSS--HHHHHHHHHHHHTT-EEEEEEE-HHHHHHHHHHHSSST--HHHHHHHHHHHHHHHHH CS
        IIGP 113 seyDlfiii..aserFssndvklakaiqrmrkrFYvvrtKlDsDlsneqkakpktfkkekvLqsirenirenlq 184
                 +++Dl i    +   F++   +l +  q m+  F   r    + +++++ +  + +  +k+L++ir+  ++ l 
  EPX74100.1  70 NKCDLAIPFdkSVPSFRHEMTRLQQSFQYMQDWFQQSRRDTLKTVDTSAYVSSIPLYGKKLLKKIRSMSVHGLT 143
                 55666665422445677888888888888888888888888888888888888888899999999987777665 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 1.7e-05
                 HT--EEEEEEESTTSSHHHHHHHHTT--TTSTTS--SSCHS.HHTS-EEEE-.SS-TTEEEEEE--GGGS CS
        IIGP  32 esaklkiavtGdsGnGkssFinaLRliGheeedsAptGvve.ttkkrtpYss.skfPnvvlWDLPGlGat 99 
                 ++ ++++  +G   +Gkss +n+LR +     ++A tG    +tk+  +        +v + D PG+ ++
  EPX74100.1 144 NNERVHVYFVGMPNTGKSSILNSLRHVSLRRSKAAITGNHPgVTKHFSEVVRlLDDAEVFMLDTPGIMTP 213
                 5789*********************************975314544444333345556666677776665 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.52   1.3e+03      51      87 ..      63      94 ..      54     141 .. 0.57
   2 ?   11.7   0.0   9.6e-05      0.25      24      61 ..     146     184 ..     124     208 .. 0.66

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.52
      AAA_16 51 dggiflrgkcdqlesaipysalaqalareellrqlld 87
                ++ i ++ kcd     ip++  +  + r + ++ l +
  EPX74100.1 63 KNRIIVYNKCDLA---IPFDKSVPSF-R-HEMTRLQQ 94
                4466677777777...6665555555.3.33333332 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 9.6e-05
      AAA_16  24 p.elvllsGesGvGKsslvrellr.alekdggiflrgkcd 61 
                 +   v+++G++ +GKss++++l++ +l++++  +++g+  
  EPX74100.1 146 ErVHVYFVGMPNTGKSSILNSLRHvSLRRSK-AAITGNHP 184
                 337899*****************85555443.33444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       664  (0.037035); expected 358.6 (0.02)
Passed bias filter:                      558  (0.0311228); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 2469.20
//
Query:       EPX74101.1  [L=553]
Description: zf-C3HC4 type zinc finger [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.089   12.7   5.7       0.15   12.0   2.8    2.1  2  zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)


Domain annotation for each model (and alignments):
>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   2.8   8.2e-06      0.15       3      35 ..     151     184 ..     149     190 .. 0.89
   2 ?    1.0   0.0     0.021   3.8e+02      39      45 ..     210     216 ..     203     225 .. 0.63

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 8.2e-06
                 SB-TTTSSS.BS-EEETTEEEEEE-HHHHHHHHH CS
  zf-C3HC4_3   3 eeCviCler.prnvvllpCgHlvlCeeCaekllk 35 
                  eC+iC+   p n+ + +C+ + +C+eC+ ++++
  EPX74101.1 151 FECPICFLYyPPNFNYTRCCAQPICSECFVEIRR 184
                 68*****966*******************99965 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.021
                 B-TTT-- CS
  zf-C3HC4_3  39 kCpiCrr 45 
                 kCp+C +
  EPX74101.1 210 KCPYCMT 216
                 5666643 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (553 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       631  (0.0351944); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.25s 00:00:00.86 Elapsed: 00:00:01.55
# Mc/sec: 1082.22
//
Query:       EPX74102.1  [L=1317]
Description: M-factor transporter Mam1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.9e-63  213.1  48.6      2e-33  116.2  22.3    2.2  2  ABC_membrane     ABC transporter transmembrane region
    5.2e-60  201.9   0.0      3e-30  105.5   0.0    2.4  2  ABC_tran         ABC transporter
    2.9e-09   36.7   9.6    0.00015   21.3   3.9    4.2  3  SMC_N            RecF/RecN/SMC N terminal domain
    2.8e-07   30.2   1.8       0.02   14.6   0.1    2.6  2  AAA_29           P-loop containing region of AAA domain
    4.8e-07   29.8   0.2    0.00082   19.2   0.0    2.9  2  AAA_15           AAA ATPase domain
    3.6e-06   27.0   7.1      0.042   13.6   0.0    4.7  5  AAA_21           AAA domain, putative AbiEii toxin, Type IV T
    1.1e-05   25.7   1.8       0.38   11.0   0.0    3.9  2  AAA_22           AAA domain
    1.9e-05   25.2   0.0       0.25   11.9   0.1    3.0  2  AAA_18           AAA domain
    3.4e-05   24.3   0.1       0.36   11.2   0.0    2.9  2  AAA_16           AAA ATPase domain
    0.00012   22.3   0.2        0.1   12.7   0.1    2.6  2  DUF87            Helicase HerA, central domain
    0.00015   21.9   0.0          1    9.5   0.0    3.0  2  AAA_33           AAA domain
    0.00023   21.1   0.1       0.41   10.5   0.0    2.5  2  RsgA_GTPase      RsgA GTPase
    0.00042   20.1   0.1       0.47   10.2   0.0    2.4  2  AAA_24           AAA domain
    0.00082   19.1   1.0       0.74    9.5   0.0    3.7  4  IstB_IS21        IstB-like ATP binding protein
    0.00084   19.6   0.0       0.16   12.2   0.0    2.5  2  AAA_28           AAA domain
     0.0014   19.0   0.0        1.3    9.5   0.0    2.9  2  RNA_helicase     RNA helicase
     0.0035   17.0   0.9       0.83    9.2   0.1    3.2  3  AAA_25           AAA domain
     0.0044   16.8   0.0        1.8    8.3   0.0    2.3  2  PRK              Phosphoribulokinase / Uridine kinase family
     0.0053   16.5   0.2        2.1    8.0   0.1    2.6  2  AAA_30           AAA domain
     0.0067   16.5   0.0        8.7    6.5   0.0    3.4  3  Sigma54_activ_2  Sigma-54 interaction domain
     0.0074   15.9   0.0       0.39   10.3   0.0    2.5  2  CobU             Cobinamide kinase / cobinamide phosphate gua
      0.008   16.2   0.0        3.2    7.8   0.0    2.8  2  AAA_5            AAA domain (dynein-related subfamily)
     0.0084   15.4   0.0       0.76    9.0   0.0    2.3  2  Zeta_toxin       Zeta toxin
  ------ inclusion threshold ------
      0.011   15.0   0.7       0.25   10.5   0.1    2.6  2  G-alpha          G-protein alpha subunit
      0.015   15.1   0.0        1.5    8.5   0.0    2.7  2  Cytidylate_kin   Cytidylate kinase
      0.024   14.1   0.0        6.8    6.2   0.0    2.6  2  AAA_7            P-loop containing dynein motor region
      0.026   14.2   0.0        2.9    7.6   0.0    2.7  2  Sigma54_activat  Sigma-54 interaction domain
      0.031   14.1   0.5        5.5    6.7   0.0    2.8  2  ATP_bind_1       Conserved hypothetical ATP binding protein
      0.039   13.0   0.0        3.9    6.4   0.0    2.3  2  T2SSE            Type II/IV secretion system protein
      0.046   14.0   0.2         21    5.4   0.0    3.7  3  AAA_19           AAA domain
      0.048   14.1   0.0        6.1    7.3   0.0    2.4  2  AAA_17           AAA domain
       0.05   13.0   0.2        3.6    6.9   0.1    2.3  2  FtsK_SpoIIIE     FtsK/SpoIIIE family
      0.072   13.0   0.1        9.8    6.1   0.0    2.4  2  APS_kinase       Adenylylsulphate kinase
      0.073   11.9   4.9        1.2    7.8   0.1    4.1  4  ABC_ATPase       Predicted ATPase of the ABC class
      0.078   12.7   1.1          1    9.1   0.3    3.0  2  DEAD             DEAD/DEAH box helicase
      0.084   13.4   5.7        1.7    9.1   0.2    2.9  2  AAA_23           AAA domain
      0.097   13.1   0.1         31    5.0   0.0    3.6  2  AAA              ATPase family associated with various cellul
        0.1   11.8   0.3         11    5.1   0.0    2.8  2  NB-ARC           NB-ARC domain
       0.11   12.3   0.0         20    5.0   0.0    2.4  2  CPT              Chloramphenicol phosphotransferase-like prot
       0.13   12.2   0.2        9.4    6.1   0.0    2.7  2  Rad17            Rad17 P-loop domain
       0.16   12.0   0.0         30    4.7   0.0    2.6  2  MMR_HSR1         50S ribosome-binding GTPase
       0.16   11.8   2.7         30    4.5   0.0    4.0  4  NACHT            NACHT domain
       0.17   12.2   0.9        5.3    7.4   0.1    3.3  2  SbcCD_C          Putative exonuclease SbcCD, C subunit
       0.31   10.3   1.7        7.5    5.8   0.1    2.8  2  ATPase           KaiC


Domain annotation for each model (and alignments):
>> ABC_membrane  ABC transporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.2  22.3   4.9e-36     2e-33       4     266 ..     102     369 ..      98     377 .. 0.95
   2 !  102.7  18.2   6.7e-32   2.7e-29       2     271 ..     764    1033 ..     763    1036 .. 0.96

  Alignments for each domain:
  == domain 1  score: 116.2 bits;  conditional E-value: 4.9e-36
                   HHHHHHHHHHHHHHHHHHHHHHHHHHHSSTCCHH......HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTHHHHHH CS
  ABC_membrane   4 iillailagvlsplfplvlgrildtlldkgdpet......ealnvysllllllglaqfilallqsyllnvtgerlskrlrrklfkkilrqpmsffdt 94 
                    ++++  + +l+pl+ + +g+i+d ++ ++ +        + +n+ sll++++g a++i++++  +l+ +++  + kr r+  f+++ + p +f++ 
    EPX74102.1 102 TLIFTCSSACLEPLMTWTIGKIFDAFSNYARSVIsldemcSIVNFNSLLIFIFGMASWIFSFAVRFLWQYLSAIIGKRSRALCFHALANKPSAFYSL 198
                   678889999******************874444468999*********************************************************9 PP

                   .SCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTH CS
  ABC_membrane  95 .nsvGellsrltndvsklrdglgeklglffqslltfvgglivmfylgwkltlvllailpliilvsaviakilkklkkkeqkavakassvaeEslsgi 190
                     s++ l++ + + ++  +++++  l++++ +++++++ l+++f ++w+ltl+++a +p+i++v a+i++ l +  + +  a +ka s++e +l+++
    EPX74102.1 199 tSSSSALINSVDRCIQFYESSINLPLFHIVENMAIVISCLVISFRYSWSLTLIIMASYPIIMFVVAFINSYLYNSYEGDRLASEKAASFIEKVLMAY 295
                   7889********************************************************************************************* PP

                   HHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSTHHHHHHHHHH CS
  ABC_membrane 191 rtVkafgreeyflekfekaleeakkagikkaianglligitqllgllsyalalwfGttlvisgelsvgdlvvflsl 266
                   +tV   ++++ + ++   a+    k+ ++  ++ +l++gi+q++ + +++  lwfG +l +sg+++ g++  ++++
    EPX74102.1 296 KTVTFHAMQNHEFQNVRTAIHHSSKSFLRFSFLHSLQGGISQFFLYSVFFQGLWFGNHLADSGKVTAGQV--VTVF 369
                   *********************************************************************5..5544 PP

  == domain 2  score: 102.7 bits;  conditional E-value: 6.7e-32
                    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTHHHHHHSC CS
  ABC_membrane    2 iliillailagvlsplfplvlgrildtlldkgdpetealnvysllllllglaqfilallqsyllnvtgerlskrlrrklfkkilrqpmsffdtns 96  
                    ++++l+++ +g+  p+ +++ ++ l+ ++ ++++    ++++s+++l+++++ +++ +l+ y++++++  ++   r   ++k+l+q+ ++fd++s
    EPX74102.1  764 FFGCLTSLGQGASIPVLSYIVSKCLNLFMHQNMSVG--IALWSCMILVVAAFTGLFYFLSHYIFSKAATSWCDYYRLIGMNKLLSQDQEWFDETS 856 
                    7899*************************9999999..*******************************************************66 PP

                    HHHHH..HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT CS
  ABC_membrane   97 vGell..srltndvsklrdglgeklglffqslltfvgglivmfylgwkltlvllailpliilvsaviakilkklkkkeqkavakassvaeEslsg 189 
                     + +l    l  +++++r+++ + +  +f +++++++gli+++++gwkl+++l+a++p+++l s+v++ +  k +k+ q+     +sv+ ++  +
    EPX74102.1  857 NSPILfsKILVGNINDMRNMIDSLVEELFVAFVMMLVGLIWALITGWKLAIILTAVSPVLLLTSKVFSYFYVKTEKDCQDCSIATTSVLHQTTLN 951 
                    666543278999*********************************************************************************** PP

                    HHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSTHHHHHHHHHHHHHHH CS
  ABC_membrane  190 irtVkafgreeyflekfekaleeakkagikkaianglligitqllgllsyalalwfGttlvisgelsvgdlvvflslfailf 271 
                    +  ++ +   +yf+ek++  l+++  a+++kai+++l  +it +l +++ +l ++ ++ +++++ ++v++ v +lsl+++ +
    EPX74102.1  952 LDAIRGLSVMPYFREKYKVLLKDYWDATKRKAIFTSLGYSITCSLLYFVRSLLFYAAAKFISKNYYNVEQTVQILSLATFTM 1033
                    **********************************************************************999999999665 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.1   0.0   2.6e-29     1e-26       3     137 .]     449     594 ..     447     594 .. 0.85
   2 !  105.5   0.0   7.2e-33     3e-30       1     137 []    1099    1245 ..    1099    1245 .. 0.86

  Alignments for each domain:
  == domain 1  score: 94.1 bits;  conditional E-value: 2.6e-29
                 EEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH.........HHHTC.......H CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxx.......x RF
    ABC_tran   3 nvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren.........esdee.......i 85 
                 nvsl++  g++  i+G++G+GKSt++ ll+   +pt G i +d+ +l +++ + + +++  + q++ +f+ + +ren         esd e       +
  EPX74102.1 449 NVSLSIPSGKVSHIIGPSGSGKSTIATLLMSFFQPTYGFIYVDDVPLAMIDPNYVYSNVTLVRQDAVVFDMT-IRENimignhnasESDFEcavrlalV 546
                 8****************************************************************9999988.********998663333333334444 PP

                 HHHHHHSTTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  86 ekalsklglkelkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137
                 ++++ +++  +  dt++  +  +LSgGq+qr+alarall++ ++l+lDEpt+
  EPX74102.1 547 DEFVWNFDKGY--DTPC--HEGTLSGGQRQRIALARALLRNTEVLILDEPTS 594
                 44444444444..5555..45*****************************96 PP

  == domain 2  score: 105.5 bits;  conditional E-value: 7.2e-33
                  EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH......HHHTCHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxx RF
    ABC_tran    1 lknvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren......esdeeiekalsk 91  
                  l+nvs+++k+ ekvaivG +G+GKSt ++ll + +   +++i +d+++l+e+++++lr++++v+ q+p+l  e+ + e+      +  + ie+al++
  EPX74102.1 1099 LSNVSFTIKPKEKVAIVGGSGSGKSTTAELLQKVYM--SDNIYIDDHPLSEIDTKWLRRKMAVVDQKPNLMGET-ILESllygcdANMVAIEEALKQ 1192
                  78********************************97..789999*****************************9.77777**998555556666666 PP

                  STTGG.......TTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                  xxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   92 lglke.......lkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137 
                   ++ +         ++++++  ++LSgGq qr+a+arall+kp+ll+lDE+t+
  EPX74102.1 1193 ANILDtlqnlpnYLESPISEFSKNLSGGQAQRLAIARALLRKPRLLILDECTS 1245
                  6666644433346677776777*****************************96 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.1    0.0096       3.9      24      41 ..     457     474 ..     442     481 .. 0.82
   2 ?    6.3   0.0     0.014       5.9     136     204 ..     565     629 ..     497     640 .. 0.82
   3 !   21.3   3.9   3.6e-07   0.00015     135     212 ..    1175    1286 ..    1097    1292 .. 0.73

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0096
                 SSEEEEEESTTSSHHHHH CS
                 xxxxxxxxxxxxxxxxxx RF
       SMC_N  24 ksftaivGpNGSGKsnll 41 
                  +++ i+Gp GSGKs + 
  EPX74102.1 457 GKVSHIIGPSGSGKSTIA 474
                 46899**********986 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.014
                 CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 136 lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemlek 204
                 +LSgG+++ +ala        + + + +lDe  + LD    + + + +++++     i i+++  ++ +
  EPX74102.1 565 TLSGGQRQRIALAR----ALLRNTEVLILDEPTSGLDIISKNLINDAIRAHRLGKTTIYITHDMSQIYN 629
                 79*****9877764....356788899*************************99999999998877665 PP

  == domain 3  score: 21.3 bits;  conditional E-value: 3.6e-07
                  T........................................CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSE CS
                  x........................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  135 e........................................lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQ 191 
                                                           +LSgG+ + +a+a        ++  l +lDe  +aLD    +k+ + +k+ +  + 
  EPX74102.1 1175 LlygcdanmvaieealkqanildtlqnlpnylespisefskNLSGGQAQRLAIA----RALLRKPRLLILDECTSALDSDSSSKIEQTIKSLT--CT 1265
                  04444444444444444444444488888888888888888******8755554....4455666799*************************..9* PP

                  EEEE-SSHHHCCC-SCEEEEE CS
                  xxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  192 fivislreemlekadklvgvt 212 
                  +++i+++  +++ ad+++ + 
  EPX74102.1 1266 VLIITHQISLMRLADRIIVMN 1286
                  ***************998765 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.2   6.5e-05     0.027      22      38 ..     456     473 ..     447     483 .. 0.81
   2 !   14.6   0.1     5e-05      0.02      14      38 ..    1101    1125 ..    1097    1138 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 6.5e-05
      AAA_29  22 kg.atlltGpsGsGKSTl 38 
                 +g +  ++GpsGsGKST+
  EPX74102.1 456 SGkVSHIIGPSGSGKSTI 473
                 455889***********8 PP

  == domain 2  score: 14.6 bits;  conditional E-value: 5e-05
      AAA_29   14 ghtieidlkgatlltGpsGsGKSTl 38  
                  + +++i++k+ + ++G sGsGKST 
  EPX74102.1 1101 NVSFTIKPKEKVAIVGGSGSGKSTT 1125
                  5788999999**************5 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0     2e-06   0.00082      22     181 ..     457     751 ..     443     761 .. 0.69
   2 !    7.1   0.0    0.0096       3.9      20      61 ..    1105    1141 ..    1098    1175 .. 0.74

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 2e-06
      AAA_15  22 seeltvliGkNnsGKSsilealdlFlnnkekkn.................................kkvikiekedleifeniseskdikIdvef.... 83 
                  + ++ +iG+ +sGKS+i+ +l  F++ ++ +                                         ++ +   ++++ + d++ +v      
  EPX74102.1 457 GK-VSHIIGPSGSGKSTIATLLMSFFQPTYGFIyvddvplamidpnyvysnvtlvrqdavvfdmtiR------ENIMI-GNHNASESDFECAVRLalvd 547
                 34.999*********************9966669999999999999999999999988864433330......22222.22344444444444445566 PP

      AAA_15  84 ................................................................................................... 83 
                                                                                                                    
  EPX74102.1 548 efvwnfdkgydtpchegtlsggqrqrialarallrntevlildeptsgldiisknlindairahrlgkttiyithdmsqiynddfvfviengrllhqgs 646
                 777777777777777777777777777777777777777777777777777777777777777777777777777778888888888888888888877 PP

      AAA_15  84 ........aekekakeyektlkskekkkadlllkkkesdlkktikdkklklkknelsdekisvekkkskkelpkekeeklekekeelkidkedlkklik 174
                          +++ ++e e+++ ++ + ++ +l  +++s+  + + d +   + +   ++++  + + +++++  ek  +++  +e+l ++ ++++++++
  EPX74102.1 647 kkdlsnleLFDDLSDEQEDFSSETTELENPFLASFEKSEEASSFYDDISPSYVDASPTMSVMHNRDPKNYSILQEKPLNSTDGNENLFLKAKEKESIYS 745
                 766665542225566666777777666666677777776666666777777777888888888888888889999999999999998555555555444 PP

      AAA_15 175 kleeslk 181
                  +++++k
  EPX74102.1 746 -IYTIFK 751
                 .666665 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0096
      AAA_15   20 dlsee.ltvliGkNnsGKSsilealdlFlnnkekknkkvikie 61  
                   ++++    ++G  +sGKS+ +e+l++    +       i+i+
  EPX74102.1 1105 TIKPKeKVAIVGGSGSGKSTTAELLQKVYMSD------NIYID 1141
                  444444999****************9876644......24444 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       9.6   3.9e+03     234     266 ..      90     140 ..      90     142 .. 0.86
   2 ?    6.1   0.1     0.021       8.6       4      20 ..     462     478 ..     459     503 .. 0.81
   3 !   13.6   0.0    0.0001     0.042     220     298 ..     549     623 ..     510     626 .. 0.80
   4 ?    1.7   0.0      0.44   1.8e+02       3      19 ..    1113    1129 ..    1112    1150 .. 0.87
   5 ?    5.4   0.2     0.033        14     237     302 ..    1217    1276 ..    1186    1277 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 9.6
      AAA_21 234 arelSdGtkrllalltallralkkg..................sllliDEp 266
                 a++lSd  + ++ l+  + +a+ ++                  s++ +DE+
  EPX74102.1  90 AFHLSDTLLIVATLIFTCSSACLEPlmtwtigkifdafsnyarSVISLDEM 140
                 5899*****************999888888888888888888888888887 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.021
      AAA_21   4 liGpNgsGKSnLLdald 20 
                 +iGp gsGKS++  +l 
  EPX74102.1 462 IIGPSGSGKSTIATLLM 478
                 8**********987774 PP

  == domain 3  score: 13.6 bits;  conditional E-value: 0.0001
      AAA_21 220 gvvflengdgqelparelSdGtkrllalltallralkkgsllliDEpEngLHPkllrrll.ellkelsrngaQviltTHS 298
                 +v+ +++g++ +     lS G+++ +al+ allr      +l++DEp +gL+  + + l+ + +++++  g   i  TH+
  EPX74102.1 549 FVWNFDKGYDTPCHEGTLSGGQRQRIALARALLRNT---EVLILDEPTSGLDI-ISKNLInDAIRAHRL-GKTTIYITHD 623
                 78888889999999999********9*******977...9************9.889999888877776.8888999998 PP

  == domain 4  score: 1.7 bits;  conditional E-value: 0.44
      AAA_21    3 vliGpNgsGKSnLLdal 19  
                  +++G  gsGKS+  ++l
  EPX74102.1 1113 AIVGGSGSGKSTTAELL 1129
                  79**********88877 PP

  == domain 5  score: 5.4 bits;  conditional E-value: 0.033
      AAA_21  237 lSdGtkrllalltallralkkgsllliDEpEngLHPkllrrllellkelsrngaQviltTHSplll 302 
                  lS G+ + la++ allr +   +ll++DE  + L+    +++ + +k+l+     v++ TH+ +l+
  EPX74102.1 1217 LSGGQAQRLAIARALLRKP---RLLILDECTSALDSDSSSKIEQTIKSLT---CTVLIITHQISLM 1276
                  4788877778888999877...***************************5...5********9997 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.0   0.00094      0.38       9      31 ..     461     483 ..     456     620 .. 0.81
   2 !   10.2   0.5    0.0017      0.68       8     104 ..    1112    1248 ..    1107    1276 .. 0.57

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00094
      AAA_22   9 vvtGesGtGKTtllrrlleqlde 31 
                  ++G+sG+GK+t +  l++ ++ 
  EPX74102.1 461 HIIGPSGSGKSTIATLLMSFFQP 483
                 59**************9999854 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.0017
      AAA_22    8 lvvtGesGtGKTtllrrlleqldeeakaee.....................................erpevvfvtlpsst.sskdllrellralgl 66  
                  ++++G sG+GK+t+++ l++ +  ++   +                                      ++  v ++ + +  +  d l++l + l++
  EPX74102.1 1112 VAIVGGSGSGKSTTAELLQKVYMSDNIYIDdhplseidtkwlrrkmavvdqkpnlmgetilesllygCDANMVAIEEALKQaNILDTLQNLPNYLES 1208
                  589*************999988544333335667666666666666666655555555555555555444444444444444555555555555555 PP

      AAA_22   67 elka...erlsseellealeqalraravielliiDEaqh.lr 104 
                  + ++   +    ++ + a+++al ++ +  lli+DE    l+
  EPX74102.1 1209 PISEfskNLSGGQAQRLAIARALLRKPR--LLILDECTSaLD 1248
                  5555443222222222444444444444..777777766665 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.0    0.0023      0.92       3      20 ..     462     479 ..     461     536 .. 0.76
   2 !   11.9   0.1   0.00062      0.25       1      49 [.    1112    1156 ..    1112    1282 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.0023
      AAA_18   3 ltGtpGvGKttlakeLsk 20 
                 + G++G+GK+t+a  L +
  EPX74102.1 462 IIGPSGSGKSTIATLLMS 479
                 78*************955 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 0.00062
      AAA_18    1 IlltGtpGvGKttlakeLskrlgfgvnlrdvakenglllevdpealdes 49  
                  +++ G +G+GK+t a+ L+k     + +  +  ++++l e d ++l+++
  EPX74102.1 1112 VAIVGGSGSGKSTTAELLQKV----YMSDNIYIDDHPLSEIDTKWLRRK 1156
                  6899**************885....444444444555555554444333 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0   0.00089      0.36      27      56 ..     460     488 ..     450     514 .. 0.79
   2 !    9.7   0.1    0.0026       1.1      25     145 ..    1110    1244 ..    1096    1267 .. 0.47

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00089
      AAA_16  27 vllsGesGvGKsslvrellralekdggifl 56 
                   ++G+sG+GKs++++ l+  ++ +   f+
  EPX74102.1 460 SHIIGPSGSGKSTIATLLMSFFQPT-YGFI 488
                 5689*************99666655.4444 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.0026
      AAA_16   25 elvllsGesGvGKsslvrellralekd...................ggiflrgkcdqlesaipysalaqalareellrqlldeaesaeleawrekle 102 
                  e v ++G sG+GKs+ ++ l++ +  d                   ++ ++ +k              +++ + +ll   +++  + e +  ++ ++
  EPX74102.1 1110 EKVAIVGGSGSGKSTTAELLQKVYMSDniyiddhplseidtkwlrrKMAVVDQKPNLM---------GETILE-SLLYGCDANMVAIEEALKQANIL 1196
                  55899***************99555552333332333222222221122222222222.........222211.22222222222222222222233 PP

      AAA_16  103 eala............avpelagaeasrllellkrllallsrderplvlvlDdlq 145 
                  ++l+             +++l+g +a+rl+ +  r+l  l   ++p +l+lD+  
  EPX74102.1 1197 DTLQnlpnylespiseFSKNLSGGQAQRLAIA--RAL--L---RKPRLLILDECT 1244
                  32224444444533222233333333333333..222..2...457778887766 PP

>> DUF87  Helicase HerA, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.0     0.015       6.3      28      81 ..     462     519 ..     447     548 .. 0.72
   2 !   12.7   0.1   0.00025       0.1      24      45 ..    1110    1131 ..    1100    1140 .. 0.85

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.015
       DUF87  28 ilgsTGsGKSntvavLleelle......kkgatililDpHGEYgkalekllsekvkvitp 81 
                 i+g +GsGKS+ + +L++           +++++ ++Dp+  Y++ +  l++++++v++ 
  EPX74102.1 462 IIGPSGSGKSTIATLLMSFFQPtygfiyVDDVPLAMIDPNYVYSNVT--LVRQDAVVFDM 519
                 899*******9999988654446666666677777777777777777..66666666665 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 0.00025
       DUF87   24 rHlAilgsTGsGKSntvavLle 45  
                  + +Ai+g +GsGKS+t+ +L +
  EPX74102.1 1110 EKVAIVGGSGSGKSTTAELLQK 1131
                  579**************99855 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0    0.0025         1       4      20 ..     462     478 ..     459     527 .. 0.87
   2 !    9.0   0.0    0.0036       1.5       3      75 ..    1113    1196 ..    1112    1285 .. 0.64

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0025
      AAA_33   4 lvGlpGsGKstlaerll 20 
                 ++G++GsGKst a+ l+
  EPX74102.1 462 IIGPSGSGKSTIATLLM 478
                 79***********9887 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0036
      AAA_33    3 llvGlpGsGKstlaerl..........lkklgavllssdt..........lrrrlfg.tdqqsktdytrvldrlyqilnelarkalsagrnvil 75  
                   +vG +GsGKst ae l          +           +          lrr++++ ++++++   t +++ ly++ ++++++  + +++ il
  EPX74102.1 1113 AIVGGSGSGKSTTAELLqkvymsdniyID----------DhplseidtkwLRRKMAVvDQKPNLMGETILESLLYGCDANMVAIEEALKQANIL 1196
                  689***********987333222222222..........1345555555577777773444444433344444555544444444444444444 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.0     0.001      0.41      98     121 ..     456     479 ..     422     488 .. 0.74
   2 !    7.8   0.0    0.0072       2.9      86     120 ..    1095    1130 ..    1009    1144 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.001
                  TTSEEEEECSTTSSHHHHHHHHCT CS
  RsgA_GTPase  98 kdktsvlvGqSGvGKStLinallp 121
                  ++k+s ++G+SG GKSt+   l++
   EPX74102.1 456 SGKVSHIIGPSGSGKSTIATLLMS 479
                  469**************9988765 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0072
                   THTTHHHHHHHCTT.SEEEEECSTTSSHHHHHHHHC CS
  RsgA_GTPase   86 tkegleelkellkd.ktsvlvGqSGvGKStLinall 120 
                     ++l++++  +k  + +++vG SG GKSt  + l+
   EPX74102.1 1095 GASALSNVSFTIKPkEKVAIVGGSGSGKSTTAELLQ 1130
                   3355666777788767899***********887776 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0    0.0078       3.2       6      23 ..     461     482 ..     456     524 .. 0.82
   2 !   10.2   0.0    0.0011      0.47       3      28 ..    1110    1134 ..    1108    1141 .. 0.86

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0078
      AAA_24   6 liyGpsgiGKTtlakel....g 23 
                  i+Gpsg+GK+t+a+ l    +
  EPX74102.1 461 HIIGPSGSGKSTIATLLmsffQ 482
                 69************98855553 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.0011
      AAA_24    3 lkiliyGpsgiGKTtlakelgpkplf 28  
                   k++i+G sg+GK+t+a  l +k+ +
  EPX74102.1 1110 EKVAIVGGSGSGKSTTAELL-QKVYM 1134
                  699**************999.77655 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0      0.11        46      50      66 ..     460     476 ..     422     480 .. 0.81
   2 ?   -2.0   0.1       6.1   2.5e+03     102     147 ..     577     622 ..     569     631 .. 0.59
   3 !    9.5   0.0    0.0018      0.74      30      67 ..    1091    1129 ..    1068    1141 .. 0.75
   4 ?    1.4   0.1      0.55   2.2e+02      98     149 ..    1224    1273 ..    1211    1283 .. 0.69

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.11
   IstB_IS21  50 ivllGpsGvGKshlaia 66 
                   ++GpsG GKs +a+ 
  EPX74102.1 460 SHIIGPSGSGKSTIATL 476
                 569**********9975 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 6.1
   IstB_IS21 102 alkrllkvdllilDd..lgllpldqaeaellfeviekryerrsiiits 147
                 a + l ++++lilD+   gl  ++++  ++   + ++r ++++i it 
  EPX74102.1 577 ARALLRNTEVLILDEptSGLDIISKNLINDA--IRAHRLGKTTIYITH 622
                 4444566799***993334444444444432..235667777777765 PP

  == domain 3  score: 9.5 bits;  conditional E-value: 0.0018
   IstB_IS21   30 ldkrkvkeLatlsf.iekkenivllGpsGvGKshlaial 67  
                   ++r  ++L + sf i+ ke ++++G+sG GKs  a  l
  EPX74102.1 1091 NQERGASALSNVSFtIKPKEKVAIVGGSGSGKSTTAELL 1129
                  3677888999999956889**************888765 PP

  == domain 4  score: 1.4 bits;  conditional E-value: 0.55
   IstB_IS21   98 klaralkrllkvdllilDdlgllpldqaeaellfeviekryerrsiiitsnl 149 
                  +la a + l k++llilD++    ld+++++++ + i++    + +iit ++
  EPX74102.1 1224 RLAIARALLRKPRLLILDECT-SALDSDSSSKIEQTIKSL-TCTVLIITHQI 1273
                  455555667889*******85.567888887777777554.34455566655 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.081        33       4      20 ..     462     478 ..     460     503 .. 0.84
   2 !   12.2   0.0   0.00039      0.16       1      21 [.    1111    1131 ..    1111    1160 .. 0.90

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.081
      AAA_28   4 itGgestGKTtlleaLa 20 
                 i+G++++GK+t++  L 
  EPX74102.1 462 IIGPSGSGKSTIATLLM 478
                 8***********99886 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 0.00039
      AAA_28    1 kivitGgestGKTtlleaLaa 21  
                  k++i+Gg+++GK+t++e L++
  EPX74102.1 1111 KVAIVGGSGSGKSTTAELLQK 1131
                  79***************9986 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0    0.0032       1.3       3      44 ..     462     503 ..     460     535 .. 0.75
   2 ?    6.3   0.0     0.031        13       2      23 ..    1113    1134 ..    1112    1171 .. 0.73

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0032
  RNA_helicase   3 lyGpsgeGKStlakeLakallkklklkkkdsvysrnpeddfw 44 
                   + Gpsg GKSt+a+ L++ ++ +++++  d+v     + +++
    EPX74102.1 462 IIGPSGSGKSTIATLLMSFFQPTYGFIYVDDVPLAMIDPNYV 503
                   78**************99988888777777666666666665 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.031
  RNA_helicase    2 wlyGpsgeGKStlakeLakall 23  
                     ++G sg GKSt+a+ L k  +
    EPX74102.1 1113 AIVGGSGSGKSTTAELLQKVYM 1134
                    689************9766544 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.1     0.002      0.83      30      54 ..     454     478 ..     449     481 .. 0.90
   2 ?    0.2   0.1       1.2   4.8e+02      32      50 ..    1108    1126 ..    1101    1130 .. 0.84
   3 ?    3.5   0.0      0.11        46     132     162 ..    1226    1254 ..    1185    1272 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.002
      AAA_25  30 lpagelallaGapgtGKttlaldla 54 
                 +p g+++ ++G++g+GK+t+a+ l+
  EPX74102.1 454 IPSGKVSHIIGPSGSGKSTIATLLM 478
                 799******************9876 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 1.2
      AAA_25   32 agelallaGapgtGKttla 50  
                   +e ++++G +g+GK+t a
  EPX74102.1 1108 PKEKVAIVGGSGSGKSTTA 1126
                  5678899999******976 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.11
      AAA_25  132 aleaaieevegvrlvviDplsralggdensn 162 
                  a+++a+ +  ++rl+++D +++al+ d+ s+
  EPX74102.1 1226 AIARALLR--KPRLLILDECTSALDSDSSSK 1254
                  46666666..49***********99988743 PP

>> PRK  Phosphoribulokinase / Uridine kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0     0.021       8.7       4      24 ..     462     482 ..     459     508 .. 0.89
   2 !    8.3   0.0    0.0044       1.8       2      27 ..    1112    1137 ..    1112    1163 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.021
         PRK   4 vagsSGaGkttvarklekifg 24 
                 + g+SG+Gk+t+a  l + f+
  EPX74102.1 462 IIGPSGSGKSTIATLLMSFFQ 482
                 789*************99997 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.0044
         PRK    2 IgvagsSGaGkttvarklekifgrek 27  
                  +++ g SG+Gk+t+a+ l+k+    +
  EPX74102.1 1112 VAIVGGSGSGKSTTAELLQKVYMSDN 1137
                  5899**************99987554 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.028        11      16      39 ..     456     478 ..     450     490 .. 0.81
   2 !    8.0   0.1    0.0051       2.1      19      45 ..    1110    1136 ..    1101    1269 .. 0.82

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.028
      AAA_30  16 sgdrvavltGpAGtGKttalkalr 39 
                 sg +v+ + Gp G+GK+t+ + l 
  EPX74102.1 456 SG-KVSHIIGPSGSGKSTIATLLM 478
                 44.5999***********987665 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0051
      AAA_30   19 rvavltGpAGtGKttalkalreaweaa 45  
                    ++++G+ G+GK+t+ + l++++ ++
  EPX74102.1 1110 EKVAIVGGSGSGKSTTAELLQKVYMSD 1136
                  56789***************9999876 PP

>> Sigma54_activ_2  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.0     0.021       8.7      25      47 ..     461     483 ..     456     518 .. 0.84
   2 ?   -0.2   0.0       2.5     1e+03      14      51 ..     576     613 ..     569     652 .. 0.76
   3 ?    5.0   0.0      0.06        24      23      45 ..    1111    1133 ..    1100    1157 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.021
                      EEEEETT--HHHHHHCC--TTS- CS
  Sigma54_activ_2  25 fltGekGsgkelvArlLhknsgp 47 
                      +++G+ Gsgk+++A lL ++ +p
       EPX74102.1 461 HIIGPSGSGKSTIATLLMSFFQP 483
                      8****************988766 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 2.5
                      HHHHHT-SS-EEEEEETT--HHHHHHCC--TTS-EE-- CS
  Sigma54_activ_2  14 LeqaaqsklpvfltGekGsgkelvArlLhknsgpwlei 51 
                      L+ a  +++ v+++ e+ sg +++++ L + + +   +
       EPX74102.1 576 LARALLRNTEVLILDEPTSGLDIISKNLINDAIRAHRL 613
                      555567999*****************999887766555 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.06
                       -EEEEEETT--HHHHHHCC--TT CS
  Sigma54_activ_2   23 pvfltGekGsgkelvArlLhkns 45  
                        v ++G+ Gsgk++ A+lL+k  
       EPX74102.1 1111 KVAIVGGSGSGKSTTAELLQKVY 1133
                       689****************9865 PP

>> CobU  Cobinamide kinase / cobinamide phosphate guanyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0      0.18        75       3      23 ..     462     482 ..     460     490 .. 0.79
   2 !   10.3   0.0   0.00095      0.39       2      34 ..    1113    1145 ..    1112    1164 .. 0.82

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.18
        CobU   3 vtGgarSGKSefAeklaeesk 23 
                 ++G++ SGKS++A  l++  +
  EPX74102.1 462 IIGPSGSGKSTIATLLMSFFQ 482
                 89***********98876554 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00095
        CobU    2 lvtGgarSGKSefAeklaeeskekvvYiATaea 34  
                   ++Gg+ SGKS+ Ae l + + ++ +Yi   + 
  EPX74102.1 1113 AIVGGSGSGKSTTAELLQKVYMSDNIYIDDHPL 1145
                  589***************999999999976555 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.0    0.0078       3.2       4      24 ..     462     482 ..     461     493 .. 0.84
   2 ?    5.2   0.0     0.048        19       2      23 ..    1112    1133 ..    1111    1143 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0078
                 EE--SSSSHHHHHHHGGGGBS CS
       AAA_5   4 LvGppGtgKselaerlaaaln 24 
                 ++Gp+G+gKs++a  l ++++
  EPX74102.1 462 IIGPSGSGKSTIATLLMSFFQ 482
                 69*************998884 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.048
                  EEEE--SSSSHHHHHHHGGGGB CS
       AAA_5    2 vlLvGppGtgKselaerlaaal 23  
                  v +vG +G+gKs+ ae l +++
  EPX74102.1 1112 VAIVGGSGSGKSTTAELLQKVY 1133
                  6689**************9987 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0     0.078        32      22      55 ..     463     496 ..     453     527 .. 0.77
   2 !    9.0   0.0    0.0019      0.76      19      40 ..    1112    1133 ..    1097    1143 .. 0.75

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.078
  Zeta_toxin  22 gGqpGAGKselaellkdelerqgnvvrldpDdlR 55 
                  G +G+GKs++a+ll   ++++ +++ +d   l 
  EPX74102.1 463 IGPSGSGKSTIATLLMSFFQPTYGFIYVDDVPLA 496
                 5789**********99999888888888765555 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0019
  Zeta_toxin   19 illgGqpGAGKselaellkdel 40  
                  + ++G++G+GKs++aell++  
  EPX74102.1 1112 VAIVGGSGSGKSTTAELLQKVY 1133
                  5567889***********9876 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0      0.25     1e+02      28      50 ..     462     484 ..     460     633 .. 0.88
   2 ?   10.5   0.1   0.00061      0.25      24      80 ..    1110    1184 ..    1089    1268 .. 0.66

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.25
                 EEESTTSSHHHHHHHHHHHCS-- CS
     G-alpha  28 llGqseSGKsTilkqlkllykkg 50 
                 ++G s+SGKsTi   l  +++++
  EPX74102.1 462 IIGPSGSGKSTIATLLMSFFQPT 484
                 5899********99888888877 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00061
                  EEEEEEESTTSSHHHHHHHHHHHCS--......--HHHHHC.CHH...........HHHHHHHHHHHHHHHHHHH CS
     G-alpha   24 vkllllGqseSGKsTilkqlkllykkg......fseeelat.wra...........viqlnivrsiktileales 80  
                   k+ ++G s+SGKsT+ + l+++y+        +  +e+ t w             ++ ++i++s+   ++a + 
  EPX74102.1 1110 EKVAIVGGSGSGKSTTAELLQKVYMSDniyiddHPLSEIDTkWLRrkmavvdqkpnLMGETILESLLYGCDANMV 1184
                  3899*****************999877677666444455333443444444455555555555555555555555 PP

>> Cytidylate_kin  Cytidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.0    0.0037       1.5       4      23 ..     463     482 ..     461     535 .. 0.86
   2 ?    3.5   0.0      0.12        51       1      20 [.    1112    1131 ..    1112    1201 .. 0.88

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0037
                     E-STTSSHHHHHHHHHHHHT CS
  Cytidylate_kin   4 DGPagsGKssvaralaeklg 23 
                      GP+gsGKs++a +l + ++
      EPX74102.1 463 IGPSGSGKSTIATLLMSFFQ 482
                     5***********99987665 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.12
                      EEEE-STTSSHHHHHHHHHH CS
  Cytidylate_kin    1 iaiDGPagsGKssvaralae 20  
                      +ai G +gsGKs+ a +l +
      EPX74102.1 1112 VAIVGGSGSGKSTTAELLQK 1131
                      7999**********998865 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0     0.035        14      29      58 ..     453     482 ..     438     511 .. 0.86
   2 ?    6.2   0.0     0.017       6.8      28      58 ..    1104    1134 ..    1097    1149 .. 0.80

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.035
       AAA_7  29 llknkkpvllvGptGtGKtviikdllkkld 58 
                  + ++k   ++Gp+G+GK++i++ l++ ++
  EPX74102.1 453 SIPSGKVSHIIGPSGSGKSTIATLLMSFFQ 482
                 5666777789***********998887665 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.017
       AAA_7   28 lllknkkpvllvGptGtGKtviikdllkkld 58  
                    +k k +v +vG +G+GK+++++ l k + 
  EPX74102.1 1104 FTIKPKEKVAIVGGSGSGKSTTAELLQKVYM 1134
                  56788999*************9876655544 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0      0.12        50      26      45 ..     461     480 ..     446     503 .. 0.82
   2 ?    7.6   0.0    0.0072       2.9      10      45 ..    1097    1132 ..    1089    1182 .. 0.74

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.12
                      EEECSTTSSHHHHHHHHHHH CS
  Sigma54_activat  26 litGesGtGKellaraihea 45 
                       i G sG+GK+++a+++ + 
       EPX74102.1 461 HIIGPSGSGKSTIATLLMSF 480
                      589***********998764 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0072
                       HHHHHHHHHCTSSS-EEEECSTTSSHHHHHHHHHHH CS
  Sigma54_activat   10 elleqikkvaktdlsvlitGesGtGKellaraihea 45  
                       ++l++++ ++k + +v i+G sG+GK++ a+++ + 
       EPX74102.1 1097 SALSNVSFTIKPKEKVAIVGGSGSGKSTTAELLQKV 1132
                       556677777888899****************99873 PP

>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.0     0.014       5.5       1      21 [.     462     482 ..     462     491 .. 0.87
   2 ?    4.7   0.1     0.057        23       1      22 [.    1114    1135 ..    1114    1140 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.014
  ATP_bind_1   1 vvGpaGsGKttfvgalseile 21 
                 ++Gp GsGK+t+   l+++++
  EPX74102.1 462 IIGPSGSGKSTIATLLMSFFQ 482
                 79***********99999987 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.057
  ATP_bind_1    1 vvGpaGsGKttfvgalseilel 22  
                  +vG+ GsGK+t  + l++++++
  EPX74102.1 1114 IVGGSGSGKSTTAELLQKVYMS 1135
                  79**********9999988776 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0     0.052        21     134     165 ..     462     492 ..     443     523 .. 0.83
   2 ?    6.4   0.0    0.0097       3.9     112     153 ..    1092    1132 ..    1042    1151 .. 0.77

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.052
       T2SSE 134 vsGgTgsGKttllyallkeinksderivtvED 165
                 + G+ gsGK+t++  l+++++ +   ++ v D
  EPX74102.1 462 IIGPSGSGKSTIATLLMSFFQPT-YGFIYVDD 492
                 56***********9999999887.67777766 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0097
       T2SSE  112 ealkekiaevlrkavrerglilvsGgTgsGKttllyallkei 153 
                  ++  +   + ++  ++ +  + + Gg gsGK+t++  l +++
  EPX74102.1 1092 QERGASALSNVSFTIKPKEKVAIVGGSGSGKSTTAELL-QKV 1132
                  444455555666677889999999*********98654.444 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0       2.6   1.1e+03      52      84 ..     282     312 ..     280     374 .. 0.85
   2 ?    3.0   0.0      0.28   1.2e+02      10      32 ..     457     479 ..     451     487 .. 0.83
   3 ?    5.4   0.0     0.051        21      10      32 ..    1109    1131 ..    1102    1139 .. 0.80

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 2.6
      AAA_19  52 grAakelrerlaalgaeatTiHrlalldfddll 84 
                 ++Aa+ +++ l  +  ++ T+H++ + +f++  
  EPX74102.1 282 EKAASFIEKVL--MAYKTVTFHAMQNHEFQNVR 312
                 68999999999..8999*****99776666554 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.28
      AAA_19  10 ekvllvtaGpGtGKTrvlkhiva 32 
                  kv  ++++ G+GK+++ +  ++
  EPX74102.1 457 GKVSHIIGPSGSGKSTIATLLMS 479
                 57899**********99877665 PP

  == domain 3  score: 5.4 bits;  conditional E-value: 0.051
      AAA_19   10 ekvllvtaGpGtGKTrvlkhiva 32  
                  ++ +++++G G+GK+++ +   +
  EPX74102.1 1109 KEKVAIVGGSGSGKSTTAELLQK 1131
                  667899**********9776555 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0      0.13        52       1      16 [.     463     478 ..     463     500 .. 0.80
   2 ?    7.3   0.0     0.015       6.1       1      19 [.    1115    1133 ..    1115    1158 .. 0.89

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.13
                 EE-TTSSHHHHHHHHH CS
      AAA_17   1 lGgPGsGKgtqceklv 16 
                 +G+ GsGK+t++  l+
  EPX74102.1 463 IGPSGSGKSTIATLLM 478
                 59*********97765 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.015
                  EE-TTSSHHHHHHHHHHHH CS
      AAA_17    1 lGgPGsGKgtqceklveky 19  
                  +Gg GsGK+t +e l++ y
  EPX74102.1 1115 VGGSGSGKSTTAELLQKVY 1133
                  7***********8887765 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0     0.091        37      44      63 ..     462     480 ..     444     510 .. 0.77
   2 ?    6.9   0.1    0.0087       3.6      35      55 ..    1106    1125 ..    1090    1130 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.091
                   EE--TTSSHHHHHHHHHHHH CS
  FtsK_SpoIIIE  44 vaGatgsGKStalntLilSl 63 
                   ++G +gsGKSt   tL++S 
    EPX74102.1 462 IIGPSGSGKSTI-ATLLMSF 480
                   89********85.6777775 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0087
                    GGGS-.SEEEE--TTSSHHHH CS
  FtsK_SpoIIIE   35 lkkmashllvaGatgsGKSta 55  
                    +k+ +  + ++G++gsGKSt+
    EPX74102.1 1106 IKPKE-KVAIVGGSGSGKSTT 1125
                    44555.899**********98 PP

>> APS_kinase  Adenylylsulphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0     0.024       9.8       3      23 ..     458     478 ..     456     490 .. 0.84
   2 ?    4.3   0.0     0.085        35       6      28 ..    1113    1135 ..    1110    1143 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.024
                 EEEEEESSTTSSHHHHHHHHH CS
  APS_kinase   3 vvvwltGlsgsGKstianale 23 
                  v ++ G sgsGKstia+ l 
  EPX74102.1 458 KVSHIIGPSGSGKSTIATLLM 478
                 566789***********9886 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.085
                  EEESSTTSSHHHHHHHHHHHHHH CS
  APS_kinase    6 wltGlsgsGKstianalekkLve 28  
                   + G sgsGKst a+ l+k  ++
  EPX74102.1 1113 AIVGGSGSGKSTTAELLQKVYMS 1135
                  57899************987665 PP

>> ABC_ATPase  Predicted ATPase of the ABC class
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.1      0.81   3.3e+02     240     261 ..     452     474 ..     448     481 .. 0.89
   2 ?    1.6   0.0      0.24        98     321     357 ..     564     600 ..     531     632 .. 0.79
   3 ?   -1.8   0.1       2.5     1e+03     247     265 ..    1112    1130 ..    1105    1134 .. 0.80
   4 ?    7.8   0.1     0.003       1.2     297     353 ..    1190    1247 ..    1180    1295 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.81
                 EEE-SS.EEEEEE-TTSSHHHHH CS
  ABC_ATPase 240 mgipkG.vtlIvGggfhGKsTLL 261
                 + ip G v  I+G+   GKsT+ 
  EPX74102.1 452 LSIPSGkVSHIIGPSGSGKSTIA 474
                 689**99*************975 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.24
                 SS--HHHHHHHHHHHHHHTT-SEEEEEGGGS-HHHH- CS
  ABC_ATPase 321 edASGStsqAanimealeagakllLiDEDtsAtNlmi 357
                  + SG   q  ++++al +++++l++DE ts   ++ 
  EPX74102.1 564 GTLSGGQRQRIALARALLRNTEVLILDEPTSGLDIIS 600
                 55699999********************999876665 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 2.5
                  EEEEE-TTSSHHHHHHHHH CS
  ABC_ATPase  247 tlIvGggfhGKsTLLeAle 265 
                  ++IvGg   GKsT  e l+
  EPX74102.1 1112 VAIVGGSGSGKSTTAELLQ 1130
                  579**********877666 PP

  == domain 4  score: 7.8 bits;  conditional E-value: 0.003
                  EEEE--TTTB---CCC--ST.TEEESS--HHHHHHHHHHHHHHTT-SEEEEEGGGS-H CS
  ABC_ATPase  297 vkgvDispFinnLPegkdtt.kfstedASGStsqAanimealeagakllLiDEDtsAt 353 
                  +k+++i   ++nLP+  ++  +   ++ SG   q  +i++al ++ +ll++DE tsA 
  EPX74102.1 1190 LKQANILDTLQNLPNYLESPiSEFSKNLSGGQAQRLAIARALLRKPRLLILDECTSAL 1247
                  67888999999***98777656667899****************************94 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0       1.8   7.3e+02      13      34 ..     456     477 ..     447     485 .. 0.79
   2 ?    9.1   0.3    0.0024         1      14     155 ..    1109    1265 ..    1099    1276 .. 0.59

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 1.8
                 TTCEEEEEESTTSSHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  13 gggdvlvaaeTGsGKTlaflip 34 
                 +g+   + ++ GsGK++++ + 
  EPX74102.1 456 SGKVSHIIGPSGSGKSTIATLL 477
                 566667889*******998765 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0024
                  TCEEEEEESTTSSHHHHHHHHHHHHHHHS..............TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxx..............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   14 ggdvlvaaeTGsGKTlaflipvlqivyet..............kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldn 96  
                  +++v + +  GsGK++ +   +lq+vy +              ++  + k+ +v     L+ +t+ +   ++  +d ++++i +  ++ + l++l+n
  EPX74102.1 1109 KEKVAIVGGSGSGKSTTA--ELLQKVYMSdniyiddhplseidTKWLRRKMAVVDQKPNLMGETILES--LLYGCDANMVAIEEALKQANILDTLQN 1201
                  567777777777777774..456666655556666666666654555566666666666666555333..333334444444343344444444422 PP

                  TCSEEEEEHHHHHHHH...HCTSSH.....CTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTT CS
                  xxxxxxxxxxxxxxxx...xxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   97 gvdivvgtpgrlddll...stgkln.....lsqvrflVlDEadrlldqgfsdfinrilnqlpqitcd 155 
                   ++++ +  + + + l   + ++l      l++ r+l+lDE+   ld++ s +i++ +++l   tc+
  EPX74102.1 1202 LPNYLESPISEFSKNLsggQAQRLAiaralLRKPRLLILDECTSALDSDSSSKIEQTIKSL---TCT 1265
                  2333333334444444344333333445669999*********************999888...665 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.2    0.0043       1.7      18      36 ..     456     474 ..     442     479 .. 0.80
   2 ?    6.0   0.1     0.037        15      22      38 ..    1112    1128 ..    1099    1131 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.0043
      AAA_23  18 skgltlItGpNGaGKTTil 36 
                 s ++  I+Gp G+GK+Ti 
  EPX74102.1 456 SGKVSHIIGPSGSGKSTIA 474
                 556777************7 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.037
      AAA_23   22 tlItGpNGaGKTTildA 38  
                  ++I+G  G+GK+T  + 
  EPX74102.1 1112 VAIVGGSGSGKSTTAEL 1128
                  58***********8876 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.076        31       3      21 ..     462     480 ..     461     511 .. 0.86
   2 ?    3.2   0.1      0.27   1.1e+02       3      74 ..    1114    1250 ..    1112    1268 .. 0.50

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.076
                 EESSTTSSHHHHHHHHHHH CS
         AAA   3 lyGppGtGKTllakavake 21 
                 ++Gp G GK+++a  +++ 
  EPX74102.1 462 IIGPSGSGKSTIATLLMSF 480
                 68***********999865 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.27
                  EESSTTSSHHHHHHHHHHHH........THEEEEEETTTCSSS...................................................... CS
         AAA    3 lyGppGtGKTllakavakel........gvefleisgsellsk...................................................... 37  
                  ++G  G GK+++a+ + k          + ++ ei+ + l+ k                                                      
  EPX74102.1 1114 IVGGSGSGKSTTAELLQKVYmsdniyidDHPLSEIDTKWLRRKmavvdqkpnlmgetilesllygcdanmvaieealkqanildtlqnlpnylespi 1210
                  6788899999999888776433322222233444444444433444444444444444444444444444444444444444444444444444443 PP

                  ..STTHHHHHHHHHHHHHHHTS.TSEEEEEETGGGHHHHH CS
         AAA   38 ..yvgesekkirelfkeakeka.kpsilfiDEidalaksr 74  
                    + ++ +   ++ ++ a++   kp  l++DE  +   s+
  EPX74102.1 1211 seFSKNLSGGQAQRLAIARALLrKPRLLILDECTSALDSD 1250
                  3333333333344444444444555666666666665555 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.097        40      24      40 ..     461     477 ..     452     487 .. 0.83
   2 ?    5.1   0.0     0.026        11      23     114 ..    1112    1245 ..    1104    1282 .. 0.64

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.097
                 EEEESTTSSHHHHHHHH CS
      NB-ARC  24 alvGmgGvGKttlakqi 40 
                  + G  G+GK+t+a+  
  EPX74102.1 461 HIIGPSGSGKSTIATLL 477
                 689**********9865 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.026
                  EEEEESTTSSHHH...HHHHHCCSHCCCCCCBT....EEEEE...............................EEESXXHHHHHHHXXHHHHHCCCT CS
      NB-ARC   23 valvGmgGvGKtt...lakqilnksdevegrFd....svawv...............................vvsktdkseeiletilkeLslsed 81  
                  va+vG  G+GK+t   l+++++ + +  +   +       w+                                + +  k+ +il+t+ +  +  e+
  EPX74102.1 1112 VAIVGGSGSGKSTtaeLLQKVYMSDNIYIDDHPlseiDTKWLrrkmavvdqkpnlmgetilesllygcdanmvAIEEALKQANILDTLQNLPNYLES 1208
                  899999*****99444556666553333333332112233448888888888888888888888888888877777777777777754443344456 PP

                  TSSSS-STTS....HHHHHHHHCCCTTEEEEEEEE-S CS
      NB-ARC   82 dleekeeves....lkrklvrlLltkrfllvlDDVwe 114 
                   ++e++++ s        + r+Ll+k  ll+lD    
  EPX74102.1 1209 PISEFSKNLSggqaQRLAIARALLRKPRLLILDECTS 1245
                  6777777766776666678888888888888887655 PP

>> CPT  Chloramphenicol phosphotransferase-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.049        20       8      41 ..     464     497 ..     457     522 .. 0.86
   2 ?    4.7   0.0     0.061        25       6      25 ..    1114    1133 ..    1111    1142 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.049
                 E-TTSSHHHHHHHHHHHSSS-EEEEEHHHHHHHS CS
         CPT   8 GgsssGKsslaralqevldepwlhlgvDafveal 41 
                 G s sGKs++a  l + ++ ++  + vD    a+
  EPX74102.1 464 GPSGSGKSTIATLLMSFFQPTYGFIYVDDVPLAM 497
                 8999***************999999999776555 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.061
                  EEE-TTSSHHHHHHHHHHHS CS
         CPT    6 LnGgsssGKsslaralqevl 25  
                  + Ggs sGKs+ a+ lq+v 
  EPX74102.1 1114 IVGGSGSGKSTTAELLQKVY 1133
                  569**************985 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0      0.19        79      48      65 ..     460     477 ..     450     489 .. 0.81
   2 ?    6.1   0.0     0.023       9.4      40      73 ..    1104    1137 ..    1096    1254 .. 0.60

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.19
       Rad17  48 LLisGPsGCgkstvvkvL 65 
                   i GPsG gkst+   L
  EPX74102.1 460 SHIIGPSGSGKSTIATLL 477
                 5689*********98776 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.023
       Rad17   40 LesrkkriLLisGPsGCgkstvvkvLskelgikl 73  
                     ++k+ + i G sG gkst+ + L k +  + 
  EPX74102.1 1104 FTIKPKEKVAIVGGSGSGKSTTAELLQKVYMSDN 1137
                  555677778899***************9986543 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0     0.091        37       4      53 ..     462     519 ..     460     588 .. 0.72
   2 ?    4.7   0.0     0.073        30       1      19 [.    1111    1129 ..    1111    1159 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.091
                 EEESTTSSHHHHHHHHHT......STEEESSSTTSSSSEEEEEEE..ETTEEEEEEEC CS
    MMR_HSR1   4 ivGrpNvGKStLinaltg......ekaivsdkpgtTrdinegrvk..lkgkeielvDt 53 
                 i+G + +GKSt+   l+           v d p + +d+n+   +  l +++ ++ D+
  EPX74102.1 462 IIGPSGSGKSTIATLLMSffqptyGFIYVDDVPLAMIDPNYVYSNvtLVRQDAVVFDM 519
                 89**********9999875544323568888888888888876542222345555555 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.073
                  EEEEEESTTSSHHHHHHHH CS
    MMR_HSR1    1 evaivGrpNvGKStLinal 19  
                  +vaivG + +GKSt    l
  EPX74102.1 1111 KVAIVGGSGSGKSTTAELL 1129
                  69************86655 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.074        30       2      22 ..     459     479 ..     458     485 .. 0.84
   2 ?    0.2   0.0       1.5   6.3e+02      28      71 ..     755     796 ..     750     814 .. 0.80
   3 ?    3.5   0.0      0.15        60       3      18 ..    1112    1127 ..    1110    1139 .. 0.80
   4 ?   -1.7   0.1       5.9   2.4e+03      61     111 ..    1209    1261 ..    1190    1273 .. 0.55

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.074
                 CEEEEC-TTTCHHHHHHHHHH CS
       NACHT   2 lvilqGeaGsGKTtLlqklal 22 
                 ++ + G++GsGK+t +  l++
  EPX74102.1 459 VSHIIGPSGSGKSTIATLLMS 479
                 56799*********9987775 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 1.5
                 -SCCCC-SEEEEEETTTTTTS-...-HCHHHCCCCTS--SSS-C CS
       NACHT  28 klpqgafklvFflslrelsrsgnarsladllfsqlpepaapvse 71 
                 k p+   +++Ff+ + +   +g++  +  +++s+++ + ++++ 
  EPX74102.1 755 KVPK--ARYLFFFGCLTSLGQGASIPVLSYIVSKCLNLFMHQNM 796
                 5556..4899****999999999989999999999998888765 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.15
                  EEEEC-TTTCHHHHHH CS
       NACHT    3 vilqGeaGsGKTtLlq 18  
                  v++ G +GsGK+t ++
  EPX74102.1 1112 VAIVGGSGSGKSTTAE 1127
                  899*********9664 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 5.9
                  CCTS--SSS-CCHHHHCCSCCCEE.....EEEE-STT-SS-TCH.........HHH CS
       NACHT   61 qlpepaapvsevwavllelperlL.....lilDglDelvtdlgqkekqpvrtlLse 111 
                  +  e +++ s + a +l++++ lL     lilD   e+ + l+ +   ++++ +++
  EPX74102.1 1209 PISEFSKNLSGGQAQRLAIARALLrkprlLILD---ECTSALDSDSSSKIEQTIKS 1261
                  444444444445555555555555666647765...55555555333444444433 PP

>> SbcCD_C  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.1       1.4   5.8e+02      31      42 ..     564     575 ..     554     600 .. 0.66
   2 ?    7.4   0.1     0.013       5.3      54      84 ..    1232    1255 ..    1206    1261 .. 0.68

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 1.4
     SbcCD_C  31 gtlSGGekqfla 42 
                 gtlSGG++q +a
  EPX74102.1 564 GTLSGGQRQRIA 575
                 788888886543 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.013
     SbcCD_C   54 yssaegrepalrlvfLDEAFsklDeesiatl 84  
                  +       +++rl++LDE  s lD++s++++
  EPX74102.1 1232 L-------RKPRLLILDECTSALDSDSSSKI 1255
                  3.......359***************99876 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.1     0.019       7.5      16      36 ..     454     474 ..     448     479 .. 0.92
   2 ?    2.3   0.2      0.21        87      19      37 ..    1109    1127 ..    1104    1131 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.019
      ATPase  16 ipegrvvlitGepGtGKtifa 36 
                 ip+g+v +i G +G+GK+++a
  EPX74102.1 454 IPSGKVSHIIGPSGSGKSTIA 474
                 89****************997 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.21
      ATPase   19 grvvlitGepGtGKtifal 37  
                  ++ v i+G++G+GK++ a+
  EPX74102.1 1109 KEKVAIVGGSGSGKSTTAE 1127
                  56799**********9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1317 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1149  (0.0640861); expected 358.6 (0.02)
Passed bias filter:                      617  (0.0344135); expected 358.6 (0.02)
Passed Vit filter:                       102  (0.00568911); expected 17.9 (0.001)
Passed Fwd filter:                        46  (0.00256568); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              44  [number of targets reported over threshold]
# CPU time: 1.13u 0.34s 00:00:01.47 Elapsed: 00:00:00.53
# Mc/sec: 7495.06
//
Query:       EPX74103.1  [L=583]
Description: elongation factor 1 alpha like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.2e-39  135.0   0.1    5.7e-39  133.7   0.0    1.7  2  GTP_EFTU     Elongation factor Tu GTP binding domain
    7.7e-16   58.2   3.9    1.4e-15   57.4   2.6    2.1  2  HBS1_N       HBS1 N-terminus
    1.7e-05   25.1   0.0    9.3e-05   22.7   0.0    2.3  2  GTP_EFTU_D3  Elongation factor Tu C-terminal domain
    6.8e-05   23.2   0.0    0.00021   21.6   0.0    1.9  1  GTP_EFTU_D2  Elongation factor Tu domain 2
     0.0015   18.6   0.0       0.37   10.9   0.0    2.8  2  MMR_HSR1     50S ribosome-binding GTPase
  ------ inclusion threshold ------
        0.2   10.9   2.0       0.29   10.3   2.0    1.2  1  Zip          ZIP Zinc transporter
       0.74    8.5   2.2        1.1    8.0   2.2    1.2  1  Presenilin   Presenilin


Domain annotation for each model (and alignments):
>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.3       1.5   3.8e+03      27      61 ..      75     109 ..      65     141 .. 0.66
   2 !  133.7   0.0   2.2e-42   5.7e-39       2     189 ..     167     383 ..     166     388 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 1.5
                 TTSSCHHHHHHHHHSTHCHSHHHHHHTSCSSCEEE CS
    GTP_EFTU  27 tgaiskkgekaeeervlDtlkeErergiTiksaai 61 
                 + a +++++ ++e++     k+E+++  T++++  
  EPX74103.1  75 CTARAEEKNGKDESHKKKPPKQEQKQKQTVEAQPS 109
                 45544544444445555666777777777776654 PP

  == domain 2  score: 133.7 bits;  conditional E-value: 2.2e-42
                 CEEEEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHH...HHHST............HCHSHHHHHHTSCSSCEEEEEETTCSSEEEEEEEESSSGGGHH CS
    GTP_EFTU   2 rirnigiighvDhGKtTLtdrLlyktgaiskkgeka...eeerv............lDtlkeErergiTiksaaisleketkkylinliDtPGHvdFsk 85 
                 +++ +++ ghvD+GK+T+++r+++++g+++ +++++   e  +             lD+++eEr rg+T+++aa+s+e  ++k+ + + D+PGH+dF++
  EPX74103.1 167 PVVHLVVTGHVDSGKSTMLGRIMFELGDVNTRSMQKlhnE--ASnqgkgsfsyawlLDSTDEERLRGVTMDVAATSFE--SHKQIYEVGDAPGHKDFIS 261
                 678899****************************997542..225689999***************************..******************* PP

                 HHHHHHHT-SEEEEEEETTTB.......STHHHHHHHHHHHHTTTE.EEEEEESCGST...HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEE CS
    GTP_EFTU  86 evirglrvlDgavlvvdaveG.......vepqteevlrlalkegvp.iivfiNKmDrl...kaelkeiveevkqklsrkeeklekygekgekevpvvfg 173
                  +i+g++ +++a+lvvd+++         + qt+e+++l++++gv  + v++NK+D +    ++++ei+  v++ l      ++ +g+k+e +v+++++
  EPX74103.1 262 GMIAGAASAEFAILVVDSSQNnyergflANGQTREHAYLLRALGVSeLAVAVNKLDLMswsLDRYNEIKASVSDFL------IRMVGFKEE-NVHFIPV 353
                 *******************9999999*9******************************99999**********999......99*****96.******* PP

                 BTTTTBTHH..............HHHHHHH CS
    GTP_EFTU 174 Salkgegvk..............tllealv 189
                 Sa++g ++               tl+e+l+
  EPX74103.1 354 SAVSGVNLIeksssplytwyngpTLIEVLD 383
                 *****9876555555555555556666665 PP

>> HBS1_N  HBS1 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.4   2.6   5.3e-19   1.4e-15       6      75 ..      13      78 ..       5      81 .. 0.85
   2 ?   -2.0   0.0       1.9   4.7e+03      15      32 ..     213     236 ..     200     239 .. 0.70

  Alignments for each domain:
  == domain 1  score: 57.4 bits;  conditional E-value: 5.3e-19
      HBS1_N  6 eddeeeeeeeeLsdedqarLrscldevrevLgeeaskvtvtekqikeAlwkyyyDvekaldyllnkfkkk 75
                e+++++e  eeL+de+++++r+++++v+e ++       vt+k+i +++w+yy+Dvek+++yl+++++ +
  EPX74103.1 13 EEYDADEPVEELTDEQEEQFREAIAAVQETVE----GLPVTNKEIADTVWYYYFDVEKSVNYLVKSCTAR 78
                4455555555**********************....4468*************************99876 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 1.9
      HBS1_N  15 e......eLsdedqarLrscldev 32 
                         L+  d++rLr ++  v
  EPX74103.1 213 GsfsyawLLDSTDEERLRGVTMDV 236
                 255566678999999999888766 PP

>> GTP_EFTU_D3  Elongation factor Tu C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       2.1   5.3e+03      61      79 ..     449     467 ..     430     473 .. 0.76
   2 !   22.7   0.0   3.6e-08   9.3e-05       1     111 [.     482     582 ..     482     583 .] 0.77

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 2.1
                  SSCCSTT-CEEEEEEECCE CS
  GTP_EFTU_D3  61 pefvkpGdnvivevelikp 79 
                   + +  Gdnv+v+++ i+p
   EPX74103.1 449 VSWAVAGDNVTVQLTDIEP 467
                  5677899999999988776 PP

  == domain 2  score: 22.7 bits;  conditional E-value: 3.6e-08
                  --EEECCEEEEEEESSS..SS-BSTT-EEEEESSS-EEEEEEEEEEECCSSTTSB-BSS-SSCCSTT-CEEEEEEECC...EEEE--TTTHCCCCEEE CS
  GTP_EFTU_D3   1 sikphtkfeAqvyilekerhtpitagYrpvlyirtadvtgkvveLlskldkktekvsekkpefvkpGdnvivevelik...pialekgseypqlGrFa 95 
                  ++k  ++f+A +  +     +pi +g + vl+   +   +  v++   ++  ++k    k++ +++ ++++++v+  +   p++  + s  p l r  
   EPX74103.1 482 PVKRSKSFTADIQTFDI--LGPILSGSTLVLHRGRTVAPV-AVKI---IN-VNGK----KARHITSRKRASMQVNFLEglyPVCTSEES--PSLSRII 566
                  689999***********..9***********975555555.4444...12.1333....467888888888888764322288888888..******* PP

                  EECTTCEEEEEEEEEE CS
  GTP_EFTU_D3  96 iReggrTvaaGvvtei 111
                  +R  g+T+aaG+v++i
   EPX74103.1 567 LRRDGNTIAAGIVKTI 582
                  *************998 PP

>> GTP_EFTU_D2  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   8.1e-08   0.00021       1      73 [.     409     476 ..     409     477 .. 0.93

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 8.1e-08
                  EEEEEEEEEESEEETTEEEEEECTCTTSEEEEEEEEEEEEETE.EESEEETTSEEEEEEEESSCCSGSSTTCEE CS
  GTP_EFTU_D2   1 GtvalgrvysGtlkkGdevrilgndtskkeivtrissletfhe.dedeavaganaGvivaikgledaiivGdtl 73 
                  G ++ grv+sG ++ G+ +++  ++++++     ++++ ++    + +avag+n+ v +  ++ ++ i  Gd+l
   EPX74103.1 409 GATISGRVESGNIQNGQVLYN--VSSQED---AYVKAVMRNSDpSVSWAVAGDNVTVQLTDIEPNQ-ISLGDIL 476
                  7899*****************..999888...*****9998776899*******************.9999998 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.013        33       2      20 ..     171     189 ..     170     202 .. 0.81
   2 !   10.9   0.0   0.00014      0.37       8      91 ..     208     285 ..     207     315 .. 0.76

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.013
                 EEEEESTTSSHHHHHHHHH CS
    MMR_HSR1   2 vaivGrpNvGKStLinalt 20 
                  ++ G+  +GKSt++ +++
  EPX74103.1 171 LVVTGHVDSGKSTMLGRIM 189
                 5799**********99886 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00014
                 TTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHHHHHHHHHH.HHCTSEEEEEEETTTTCSH CS
    MMR_HSR1   8 pNvGKStLinaltgekaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseekglgkafla.leeadlillvvdaseeklk 91 
                 +N GK ++  a++ +    ++  g+T d+    ++ +++ +e+ D pG  +      ++   + a   +a+ ++lvvd+s+++++
  EPX74103.1 208 SNQGKGSFSYAWLLDSTDEERLRGVTMDVAATSFESHKQIYEVGDAPG-HK------DFISGMIAgAASAEFAILVVDSSQNNYE 285
                 799**********999999****************888999*******.33......3333333314458999999998866663 PP

>> Zip  ZIP Zinc transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   2.0   0.00011      0.29      90     193 ..      62     194 ..      57     229 .. 0.68

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00011
         Zip  90 llveklltmivek.....ksshkektpkkasssssesaakksvsndkveeseekedhvaeadtdadskeelrngkqeksesekeqas............ 171
                 + vek ++++v++     ++++++++++k++ +++e++ k++v++++++++     +v+ ++ + + ke++ +++++ +e ++ +++            
  EPX74103.1  62 FDVEKSVNYLVKSctaraEEKNGKDESHKKKPPKQEQKQKQTVEAQPSTKNASASLNVSMKKLNLNGKEQTGEKSKDEEETQTPRKQessllidvpkiy 160
                 568888999999988777666666666777777777777777777777777777777777777777666665555554444444333566777777776 PP

         Zip 172 ............eeedkeklaslkvraiilllgl 193
                              + +  + +s  +  i+++lg+
  EPX74103.1 161 eesqpkpvvhlvVTGHVDSGKSTMLGRIMFELGD 194
                 6666666666664444444444455555555555 PP

>> Presenilin  Presenilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   2.2   0.00042       1.1     229     292 ..      85     148 ..      57     194 .. 0.46

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.00042
  Presenilin 229 kaevaeseeeeeaekkkeeasesskeeeseeesseksaqsse..........seeeseeesseaessaeessee 292
                 k+e ++++  ++++k+k++ + + ++++++           +          + +e++ e+s++e+++++++++
  EPX74103.1  85 KDESHKKKPPKQEQKQKQTVEAQPSTKNASA----------SlnvsmkklnlNGKEQTGEKSKDEEETQTPRKQ 148
                 1111111111111111111111111111111..........111222222222222222222222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (583 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1743  (0.0972168); expected 358.6 (0.02)
Passed bias filter:                      798  (0.0445089); expected 358.6 (0.02)
Passed Vit filter:                       104  (0.00580066); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.74u 0.30s 00:00:01.04 Elapsed: 00:00:00.46
# Mc/sec: 3802.03
//
Query:       EPX74104.1  [L=1689]
Description: adenylate cyclase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.7e-39  134.7   0.0    4.3e-39  134.0   0.0    1.3  1  Guanylate_cyc  Adenylate and Guanylate cyclase catalytic doma
    3.6e-35  119.5  72.1    4.4e-08   32.8   5.5    9.2  9  LRR_8          Leucine rich repeat
    4.1e-34  118.4   0.1      1e-33  117.1   0.1    1.6  1  PP2C           Protein phosphatase 2C
    7.2e-24   83.5  86.6     0.0011   19.3   0.3   12.7 13  LRR_4          Leucine Rich repeats (2 copies)
    0.00037   20.6  74.4       0.92   10.3   0.1   16.9 17  LRR_1          Leucine Rich Repeat
     0.0049   17.5   0.0      0.011   16.3   0.0    1.6  1  RA             Ras association (RalGDS/AF-6) domain
  ------ inclusion threshold ------
       0.19   11.7  15.3        1.2    9.1   0.6    5.0  5  LRR_5          BspA type Leucine rich repeat region (6 copies
       0.59    9.6  24.6       0.22   11.0   0.5    5.3  5  LRR_9          Leucine-rich repeat


Domain annotation for each model (and alignments):
>> Guanylate_cyc  Adenylate and Guanylate cyclase catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.0   0.0   1.9e-42   4.3e-39       4     181 ..    1326    1517 ..    1323    1519 .. 0.90

  Alignments for each domain:
  == domain 1  score: 134.0 bits;  conditional E-value: 1.9e-42
  Guanylate_cyc    4 esydevtilFadIvgftalssahspievvklLnelyarfdelldekkvykvktiGdaymvvsglpeekaahaaklaelaLdmleal.eevaves 96  
                     ++  +++++F+dI+++t l+++h p+++ ++++++++ ++++l+++++y+vkt Gda+mv++++    +a++ + ++++L+ml+a+  +  ves
     EPX74104.1 1326 PPRGSIAMVFTDIKNSTLLWERH-PVAMRSAIKTHNTIMRRQLRATGGYEVKTEGDAFMVCFQTV---PAALLWSFSVQLQMLSADwPNEIVES 1415
                     567899*****************.*****************************************...******************98888888 PP

  Guanylate_cyc   97 k..............eglkvrvGihtGpvvagviGakkprydvwGntvnlAsrmestgkagkiqvseetyellk...eeqfeltergevevk.. 171 
                                    +gl+vr+G+++G +v++++   ++r+d++G  vn +sr+ s++++g+i+vs++++ +l+   +e ++ ++ g++ ++  
     EPX74104.1 1416 VqgrtvlgpknevlyRGLSVRIGVNYGVTVSELD-PITRRMDYYGPMVNRTSRVVSVADGGQIAVSADVVTVLNrleSEAMSSERSGRYAMEir 1508
                     45899*****************************.***************************************88755555555566665521 PP

  Guanylate_cyc  172 Gkgkletyfl 181 
                     +  k++ y++
     EPX74104.1 1509 A-LKQVGYIV 1517
                     4.66666665 PP

>> LRR_8  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   2.1   7.9e-07    0.0018       5      59 ..     410     464 ..     409     465 .. 0.96
   2 !   24.4   1.7   7.8e-09   1.7e-05       1      61 []     477     538 ..     477     538 .. 0.96
   3 !   19.8   3.0   2.2e-07    0.0005      23      61 .]     547     584 ..     542     584 .. 0.91
   4 !   21.0   4.8   9.3e-08   0.00021       2      61 .]     573     630 ..     573     630 .. 0.94
   5 !   29.9   1.1   1.5e-10   3.4e-07       2      60 ..     662     719 ..     661     720 .. 0.93
   6 !   14.2   0.4   1.3e-05     0.028      16      59 ..     723     764 ..     716     766 .. 0.86
   7 !   25.9   3.9   2.7e-09     6e-06       1      61 []     808     868 ..     808     868 .. 0.94
   8 !   32.8   5.5     2e-11   4.4e-08       2      61 .]     833     891 ..     832     891 .. 0.96
   9 !   10.8   6.7   0.00014      0.31       2      59 ..     880     941 ..     879     942 .. 0.86

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 7.9e-07
                 EEE-TTS--SEE-TTSSTT-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS CS
       LRR_8   5 sLdLsnNrltslddeaFkglsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgN 59 
                  Ld+++++l++++ ++  + + L +L++s+Nl   l  + ++ + +L+ Ld+s+N
  EPX74104.1 410 HLDIRRSNLEVIPIKFYPHAHELISLNISSNLSLELPLDFMERCVNLKILDMSNN 464
                 79*****************************999999*****************9 PP

  == domain 2  score: 24.4 bits;  conditional E-value: 7.8e-09
                 TT-SEEE-TTS--SEE-TTSSTT..-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8   1 pnLtsLdLsnNrltslddeaFkg..lsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61 
                 ++L++L++s+N + +ld+  F+g   s Lk+++ s N+l +l p +++ L++L+ LdLs+N++
  EPX74104.1 477 RRLEVLNVSRNDIYELDPLIFSGrsRSTLKEFYCSLNKLLFL-PYSIRYLTNLTVLDLSYNNF 538
                 68*********************88899**************.9*****************85 PP

  == domain 3  score: 19.8 bits;  conditional E-value: 2.2e-07
                 T-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8  23 glsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61 
                  ls+L++L+Ls+N+l  +    +++L +L++L+L++N+L
  EPX74104.1 547 ELSSLEILNLSHNNLYEVC-PEIDQLGNLKELYLQSNDL 584
                 699*************995.68***************98 PP

  == domain 4  score: 21.0 bits;  conditional E-value: 9.3e-08
                 T-SEEE-TTS--SEE-TTSSTT-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8   2 nLtsLdLsnNrltslddeaFkglsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61 
                 nL++L+L++N l++   ++  +l++L+++dL+ N+l++++  a+s +p+L+++  s N +
  EPX74104.1 573 NLKELYLQSNDLSGHLIQQLGSLRKLEIIDLRFNSLNHIN--ALSECPNLKEIRASCNLI 630
                 8***********9999999999*****************7..**********99888865 PP

  == domain 5  score: 29.9 bits;  conditional E-value: 1.5e-10
                 T-SEEE-TTS--SEE-TTSSTT-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS- CS
       LRR_8   2 nLtsLdLsnNrltslddeaFkglsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNr 60 
                 +L +Ld s+ +l sl+d + ++l nL++L++s+N    + p+++s+L++L++L+ +++ 
  EPX74104.1 662 SLVYLDASHGKLVSLKDAMLESLVNLETLNISYNHFVQI-PDSISHLRNLKFLYCTNCE 719
                 68889999*******************************.9************977765 PP

  == domain 6  score: 14.2 bits;  conditional E-value: 1.3e-05
                 E-TTSSTT-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS CS
       LRR_8  16 lddeaFkglsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgN 59 
                 +++e  k ls+L+ Ld+  N+++ + p+  ++ +sL+  +Ls+N
  EPX74104.1 723 VSPELSK-LSKLTLLDMHANNIKAF-PEEVWQISSLKIVNLSSN 764
                 5666666.*****************.9****************9 PP

  == domain 7  score: 25.9 bits;  conditional E-value: 2.7e-09
                 TT-SEEE-TTS--SEE-TTSSTT-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8   1 pnLtsLdLsnNrltslddeaFkglsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61 
                 p++++L+L +Nrl + + +  + ++ L++L+Ls+N lt +    ++++++L ++ LsgN+L
  EPX74104.1 808 PSVEELILVDNRLGDECFKLLSFFKELRILNLSYNYLTEIPSAFLQNFSHLNHMFLSGNKL 868
                 67899***********************************99999**************98 PP

  == domain 8  score: 32.8 bits;  conditional E-value: 2e-11
                 T-SEEE-TTS--SEE-TTSSTT-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8   2 nLtsLdLsnNrltslddeaFkglsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61 
                 +L++L+Ls N+lt+++  + +++s+L+++ Ls N+l+ +s  + s   sL+ L+++gNr+
  EPX74104.1 833 ELRILNLSYNYLTEIPSAFLQNFSHLNHMFLSGNKLSNISISSNSRI-SLETLYVNGNRI 891
                 79**************************************9999999.**********97 PP

  == domain 9  score: 10.8 bits;  conditional E-value: 0.00014
                 T-SEEE-TTS--SEE-TTSSTT-TT--EEE--SS---GG.....GGGGGTT--S-.EEE--SS CS
       LRR_8   2 nLtsLdLsnNrltslddeaFkglsnLkvLdLsnNllttl.....spgafsgLpsLrsLdLsgN 59 
                 +L++L+++ Nr++s ++    + ++L++Ld +nN+l++l     + +++   p+L+ LdLsgN
  EPX74104.1 880 SLETLYVNGNRISSFPKNETLS-RSLRYLDFGNNNLQSLtvnqnNDNSLNIPPNLECLDLSGN 941
                 79*************9877774.9**************9555556788888999999999999 PP

>> PP2C  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.1   0.1   4.5e-37     1e-33      50     258 .]    1046    1267 ..    1022    1267 .. 0.76

  Alignments for each domain:
  == domain 1  score: 117.1 bits;  conditional E-value: 4.5e-37
                  HHHHHHHHHHHHHHHHCHTTH..HHHHHHHHHHHHHHHHHHHH...................HHHH.......C.HCCT-EEEEEEEEEETTEEEEE CS
        PP2C   50 kyarehleeilksqksfeele..kleqalrksfladtdeelks...................skan.......t.epsksGstavvalirgtklyvA 117 
                  k+a e++  +l++  s +++   ++++alr +f + + ++l +                   +  +       +  +++ G    +++ir+t+ ++A
  EPX74104.1 1046 KFAYENIASCLAEELSTCGSSseQVKNALRRGFIN-LNKKLGNviyqdmatiaeykdkkeklP--KsskgyymDeTCMDIGVSIALIYIRDTRAFIA 1139
                  45555555555555555554444333333333333.222222222223333333332233441..03356777558********************* PP

                  EESS-EEEEEETTEEE.EECS---STTSHHHHHHHHHTT--EEECCEEETTTBSBSB-EE-GGGTCCCCCCSTSB---EEEEEEE-TTEEEEEEE-H CS
        PP2C  118 nvGDSravLcrkgnak.keltedHkpsdedEreRIeeaggsvsngegrvngsLavsRalGDlelkpketeeqlvsaePdvtsvklteedefliLacd 213 
                  nvG+S+ +++++++++ + l+  H++ +e+E++R+ ++ g +s   gr+  +   +Ra+G l ++p       v+a P+v+ ++l+e +ef+iLa++
  EPX74104.1 1140 NVGTSMSLMSTRNDSEpTLLSDVHDTFNEKEIRRVIDSAGLIS---GRIQST--TTRAIGRLSQFP------GVQAVPHVNIQPLSELNEFIILANK 1225
                  ****************9**************************...******..************......9************************ PP

                  HHHTTSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCCHHCHC CS
        PP2C  214 Glwdvlsdqeavdlvrdelekkkspeevaeelvdeaiargsedni 258 
                  ++w+v+s++ ++d+vr ++++      ++++l+d+aia+g+++n+
  EPX74104.1 1226 EFWNVMSKRIVIDIVRANRQS---MLLASTKLRDYAIAYGAKNNT 1267
                  ********************8...79*****************96 PP

>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   3.7   0.00036      0.82       2      33 ..     431     464 ..     430     468 .. 0.79
   2 ?    5.3   0.0     0.013        28      22      43 ..     476     493 ..     467     495 .. 0.82
   3 !   18.3   1.6     1e-06    0.0023       3      36 ..     505     539 ..     503     548 .. 0.89
   4 !   14.6   4.0   1.5e-05     0.033       2      41 ..     550     586 ..     549     595 .. 0.86
   5 !    9.9   0.6   0.00045         1       2      36 ..     597     630 ..     596     635 .. 0.85
   6 !   12.0   1.0    0.0001      0.23       2      38 ..     662     699 ..     641     709 .. 0.85
   7 !   19.3   0.3   4.9e-07    0.0011       2      37 ..     709     744 ..     708     748 .. 0.84
   8 !    9.1   1.4    0.0008       1.8       3      39 ..     733     769 ..     733     773 .. 0.84
   9 !   14.5   0.7   1.6e-05     0.035       1      40 [.     808     848 ..     808     854 .. 0.84
  10 !   15.8   3.9   6.5e-06     0.015       2      40 ..     833     872 ..     832     877 .. 0.82
  11 !   11.2   2.2   0.00018      0.41       2      39 ..     857     894 ..     856     900 .. 0.80
  12 !   14.1   6.9   2.1e-05     0.048       2      41 ..     880     919 ..     879     928 .. 0.86
  13 !   10.3   7.9   0.00033      0.74       2      33 ..     903     941 ..     902     971 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00036
                 S--EEE--SS---.E-S-...HHH-TT--EEE-.-S CS
       LRR_4   2 nLevLdLsnNqlt.dipl...leklpnLkeLdLsgN 33 
                  L++L++s+ +l+ ++pl    + + nLk Ld+s+N
  EPX74104.1 431 ELISLNISS-NLSlELPLdfmER-CVNLKILDMSNN 464
                 699*****8.6776688884444.*********777 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.013
                 -TT--EEE-.-S-----GGGGX CS
       LRR_4  22 lpnLkeLdLsgNnlitdldeLk 43 
                 l  L++L++s+N    d++eL 
  EPX74104.1 476 LRRLEVLNVSRN----DIYELD 493
                 889*********....998885 PP

  == domain 3  score: 18.3 bits;  conditional E-value: 1e-06
                 --EEE--SS---E-S-.HHH-TT--EEE-.-S--- CS
       LRR_4   3 LevLdLsnNqltdipl.leklpnLkeLdLsgNnli 36 
                 L++ ++s N+l  +p  ++ l+nL++LdLs Nn++
  EPX74104.1 505 LKEFYCSLNKLLFLPYsIRYLTNLTVLDLSYNNFV 539
                 999****88*******8667************987 PP

  == domain 4  score: 14.6 bits;  conditional E-value: 1.5e-05
                 S--EEE--SS---E-S-.HHH-TT--EEE-.-S-----GGG CS
       LRR_4   2 nLevLdLsnNqltdipl.leklpnLkeLdLsgNnlitdlde 41 
                 +Le+L+Ls+N+l ++ + + +l nLkeL+L +N    dl++
  EPX74104.1 550 SLEILNLSHNNLYEVCPeIDQLGNLKELYLQSN----DLSG 586
                 7************76664778*********999....8865 PP

  == domain 5  score: 9.9 bits;  conditional E-value: 0.00045
                 S--EEE--SS---E-S-HHH-TT--EEE-.-S--- CS
       LRR_4   2 nLevLdLsnNqltdiplleklpnLkeLdLsgNnli 36 
                 +Le++dL+ N l  i+ l+ +pnLke+   ++nli
  EPX74104.1 597 KLEIIDLRFNSLNHINALSECPNLKEIRA-SCNLI 630
                 8*******999998888888*******98.55576 PP

  == domain 6  score: 12.0 bits;  conditional E-value: 0.0001
                 S--EEE--SS---E-S-..HHH-TT--EEE-.-S----- CS
       LRR_4   2 nLevLdLsnNqltdipl..leklpnLkeLdLsgNnlitd 38 
                 +L +Ld s+ +l ++    le+l nL++L++s N ++ +
  EPX74104.1 662 SLVYLDASHGKLVSLKDamLESLVNLETLNISYNHFV-Q 699
                 6889****7699999999999**********999555.3 PP

  == domain 7  score: 19.3 bits;  conditional E-value: 4.9e-07
                 S--EEE--SS---E-S-.HHH-TT--EEE-.-S---- CS
       LRR_4   2 nLevLdLsnNqltdipl.leklpnLkeLdLsgNnlit 37 
                 nL++L++ n+ ++ +++ l+kl +L+ Ld++ N +i+
  EPX74104.1 709 NLKFLYCTNCEISYVSPeLSKLSKLTLLDMHAN-NIK 744
                 9************77777999*********777.554 PP

  == domain 8  score: 9.1 bits;  conditional E-value: 0.0008
                 --EEE--SS---E-S-.HHH-TT--EEE-.-S-----G CS
       LRR_4   3 LevLdLsnNqltdipl.leklpnLkeLdLsgNnlitdl 39 
                 L+ Ld + N+++ +p   +++ +Lk ++Ls+N  ++++
  EPX74104.1 733 LTLLDMHANNIKAFPEeVWQISSLKIVNLSSN-ILEKI 769
                 778999978****9996559*********999.77887 PP

  == domain 9  score: 14.5 bits;  conditional E-value: 1.6e-05
                 SS--EEE--SS---E-S-.HHH.-TT--EEE-.-S-----GG CS
       LRR_4   1 pnLevLdLsnNqltdipl.lek.lpnLkeLdLsgNnlitdld 40 
                 p+ e+L L +N+l d  + l + ++ L+ L+Ls N ++t ++
  EPX74104.1 808 PSVEELILVDNRLGDECFkLLSfFKELRILNLSYN-YLTEIP 848
                 6889**********977785577*********999.999984 PP

  == domain 10  score: 15.8 bits;  conditional E-value: 6.5e-06
                 S--EEE--SS---E-S-..HHH-TT--EEE-.-S-----GG CS
       LRR_4   2 nLevLdLsnNqltdipl..leklpnLkeLdLsgNnlitdld 40 
                  L++L+Ls N lt+ip+  l+++ +L +  LsgN ++++++
  EPX74104.1 833 ELRILNLSYNYLTEIPSafLQNFSHLNHMFLSGN-KLSNIS 872
                 7****************7666677777777****.888886 PP

  == domain 11  score: 11.2 bits;  conditional E-value: 0.00018
                 S--EEE--SS---E-S-HHH.-TT--EEE-.-S-----G CS
       LRR_4   2 nLevLdLsnNqltdipllek.lpnLkeLdLsgNnlitdl 39 
                 +L +  Ls+N+l+ i+  ++   +L++L+++gN +i+++
  EPX74104.1 857 HLNHMFLSGNKLSNISISSNsRISLETLYVNGN-RISSF 894
                 688899***********6633577******999.66665 PP

  == domain 12  score: 14.1 bits;  conditional E-value: 2.1e-05
                 S--EEE--SS---E-S-HHH.-TT--EEE-.-S-----GGG CS
       LRR_4   2 nLevLdLsnNqltdipllek.lpnLkeLdLsgNnlitdlde 41 
                 +Le+L+ ++N+++++p  e    +L++Ld  gNn++++l+ 
  EPX74104.1 880 SLETLYVNGNRISSFPKNETlSRSLRYLDF-GNNNLQSLTV 919
                 7*************9997764566******.9999999974 PP

  == domain 13  score: 10.3 bits;  conditional E-value: 0.00033
                 S--EEE--SS---E-S-....HH..H.-TT--EEE-.-S CS
       LRR_4   2 nLevLdLsnNqltdipl....le..k.lpnLkeLdLsgN 33 
                 +L++Ld++nN+l+++       +  +  pnL+ LdLsgN
  EPX74104.1 903 SLRYLDFGNNNLQSLTVnqnnDNslNiPPNLECLDLSGN 941
                 7**********9999997545226777999********9 PP

>> LRR_1  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0       1.1   2.4e+03       3      16 ..     409     422 ..     409     425 .. 0.84
   2 ?    0.3   0.4      0.78   1.8e+03       2      17 ..     432     447 ..     431     453 .. 0.78
   3 ?    3.8   0.1     0.055   1.2e+02       1      12 [.     455     466 ..     455     476 .. 0.81
   4 ?    2.7   0.0      0.13   2.9e+02       1      12 [.     478     489 ..     478     508 .. 0.74
   5 ?    5.2   0.1      0.02        44       1      12 [.     527     538 ..     527     549 .. 0.82
   6 ?    5.0   0.3     0.023        53       1      12 [.     550     561 ..     550     572 .. 0.80
   7 ?    5.1   0.5     0.021        47       1      18 [.     573     590 ..     573     595 .. 0.79
   8 ?    3.3   0.7     0.083   1.9e+02       1      17 [.     597     611 ..     597     631 .. 0.80
   9 ?    0.9   0.0      0.51   1.1e+03       4      13 ..     642     651 ..     641     663 .. 0.75
  10 !    9.9   0.2   0.00057       1.3       1      23 []     686     707 ..     686     707 .. 0.86
  11 ?    0.8   0.2      0.54   1.2e+03       1      17 [.     709     724 ..     709     743 .. 0.78
  12 ?    2.3   0.0      0.17   3.8e+02       1      13 [.     755     767 ..     755     781 .. 0.85
  13 !   10.3   0.1   0.00041      0.92       2      23 .]     834     855 ..     833     855 .. 0.93
  14 ?   -1.7   0.5       3.5   7.8e+03       2      17 ..     858     873 ..     857     877 .. 0.60
  15 ?    5.1   0.0     0.022        49       1      18 [.     880     897 ..     880     900 .. 0.91
  16 ?    3.6   1.5     0.066   1.5e+02       1      17 [.     903     919 ..     903     928 .. 0.84
  17 ?    4.2   0.1     0.042        95       1      15 [.     932     946 ..     932     950 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 1.1
       LRR_1   3 rhLdLsnnpllglp 16 
                 +hLd+++ +l+ +p
  EPX74104.1 409 QHLDIRRSNLEVIP 422
                 79******998776 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.78
       LRR_1   2 LrhLdLsnnpllglpp 17 
                 L +L++s+n  l lp 
  EPX74104.1 432 LISLNISSNLSLELPL 447
                 889******9866664 PP

  == domain 3  score: 3.8 bits;  conditional E-value: 0.055
       LRR_1   1 nLrhLdLsnnpl 12 
                 nL+ Ld+snn  
  EPX74104.1 455 NLKILDMSNNLR 466
                 8*********75 PP

  == domain 4  score: 2.7 bits;  conditional E-value: 0.13
       LRR_1   1 nLrhLdLsnnpl 12 
                 +L++L++s+n +
  EPX74104.1 478 RLEVLNVSRNDI 489
                 69********98 PP

  == domain 5  score: 5.2 bits;  conditional E-value: 0.02
       LRR_1   1 nLrhLdLsnnpl 12 
                 nL++LdLs+n++
  EPX74104.1 527 NLTVLDLSYNNF 538
                 8*********98 PP

  == domain 6  score: 5.0 bits;  conditional E-value: 0.023
       LRR_1   1 nLrhLdLsnnpl 12 
                 +L+ L+Ls+n+l
  EPX74104.1 550 SLEILNLSHNNL 561
                 69********98 PP

  == domain 7  score: 5.1 bits;  conditional E-value: 0.021
       LRR_1   1 nLrhLdLsnnpllglppn 18 
                 nL++L+L +n l+g +++
  EPX74104.1 573 NLKELYLQSNDLSGHLIQ 590
                 8**********9776655 PP

  == domain 8  score: 3.3 bits;  conditional E-value: 0.083
       LRR_1   1 nLrhLdLsnnpllglpp 17 
                 +L+ +dL+ n+l +  +
  EPX74104.1 597 KLEIIDLRFNSLNH--I 611
                 79*********942..2 PP

  == domain 9  score: 0.9 bits;  conditional E-value: 0.51
       LRR_1   4 hLdLsnnpll 13 
                 +Ld s++pl+
  EPX74104.1 642 YLDFSRCPLT 651
                 8*******94 PP

  == domain 10  score: 9.9 bits;  conditional E-value: 0.00057
       LRR_1   1 nLrhLdLsnnpllglppnsfqnL 23 
                 nL++L++s+n++   +p+s+++L
  EPX74104.1 686 NLETLNISYNHF-VQIPDSISHL 707
                 8***********.7888888776 PP

  == domain 11  score: 0.8 bits;  conditional E-value: 0.54
       LRR_1   1 nLrhLdLsnnpllglpp 17 
                 nL+ L+ +n+ + +  +
  EPX74104.1 709 NLKFLYCTNCEI-SYVS 724
                 8*********98.3333 PP

  == domain 12  score: 2.3 bits;  conditional E-value: 0.17
       LRR_1   1 nLrhLdLsnnpll 13 
                 +L+  +Ls+n+l+
  EPX74104.1 755 SLKIVNLSSNILE 767
                 69*********94 PP

  == domain 13  score: 10.3 bits;  conditional E-value: 0.00041
       LRR_1   2 LrhLdLsnnpllglppnsfqnL 23 
                 Lr L+Ls+n l+ +p++ +qn+
  EPX74104.1 834 LRILNLSYNYLTEIPSAFLQNF 855
                 9***********9999999986 PP

  == domain 14  score: -1.7 bits;  conditional E-value: 3.5
       LRR_1   2 LrhLdLsnnpllglpp 17 
                 L h  Ls+n l+++++
  EPX74104.1 858 LNHMFLSGNKLSNISI 873
                 5556699999954443 PP

  == domain 15  score: 5.1 bits;  conditional E-value: 0.022
       LRR_1   1 nLrhLdLsnnpllglppn 18 
                 +L++L++++n+++++p+n
  EPX74104.1 880 SLETLYVNGNRISSFPKN 897
                 69**********999987 PP

  == domain 16  score: 3.6 bits;  conditional E-value: 0.066
       LRR_1   1 nLrhLdLsnnpllglpp 17 
                 +Lr+Ld +nn+l +l+ 
  EPX74104.1 903 SLRYLDFGNNNLQSLTV 919
                 69*********966655 PP

  == domain 17  score: 4.2 bits;  conditional E-value: 0.042
       LRR_1   1 nLrhLdLsnnpllgl 15 
                 nL+ LdLs+n+ +++
  EPX74104.1 932 NLECLDLSGNSWFQF 946
                 8*********96666 PP

>> RA  Ras association (RalGDS/AF-6) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   5.1e-06     0.011       2      76 ..     294     361 ..     293     365 .. 0.93

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 5.1e-06
                 ECEEEEEETTT-TT..EEEEEEETTSBHHHHHHHHHHHCT-GGGGCCEEEECCCTTTTEEEEE-TTSBCHHHHCC CS
          RA   2 tgvlkVytedlkpgttyksikvsststaqeViealLekfgledspedyvLveskerggeerkLdddecplqiqlq 76 
                 +++l+Vy +d+     ++s   + ++++ ++i+ l++ f l + + +++L   ++  ++er+L+++e+p  ++++
  EPX74104.1 294 PFFLRVYRDDKT----SVSFSCPMNMKTSDIIQRLARLFFL-PFSANFYL--LLVQFQTERILLPHEQPCIMFRK 361
                 689*********....9************************.88899999..89***************999887 PP

>> LRR_5  BspA type Leucine rich repeat region (6 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.16   3.5e+02      62     113 ..     411     465 ..     389     491 .. 0.77
   2 ?    9.1   0.6   0.00054       1.2      28     116 ..     612     700 ..     594     719 .. 0.77
   3 ?    8.6   0.3   0.00075       1.7       3     113 ..     630     750 ..     628     755 .. 0.82
   4 ?    2.9   0.6     0.046     1e+02      64     116 ..     700     753 ..     695     772 .. 0.44
   5 ?    3.3   2.8     0.033        75      66     111 ..     842     888 ..     817     932 .. 0.58

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.16
       LRR_5  62 itip.ssltsigeyaFsncsslkeitlpsnlt.tigssaFsnc.slesitipssv 113
                 ++i  s+l+ i+ + + + ++l +++++snl+ ++  +  + c +l+ + +++++
  EPX74104.1 411 LDIRrSNLEVIPIKFYPHAHELISLNISSNLSlELPLDFMERCvNLKILDMSNNL 465
                 5554147778888888888888888888887667888888888888888877765 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00054
       LRR_5  28 yaFsnctslksitlpsslteigsyaFsncssltsitipssltsigeyaFsncsslkeitlps.nlttigssaFsnc.slesitips.svtki 116
                 +a s+c +lk+i  + +l  i+ + F +  s t ++++    +i e  F+++ssl  ++ ++ +l ++++ + ++  +le+++i+  ++ +i
  EPX74104.1 612 NALSECPNLKEIRASCNL--ISHHEFPCR-SATYLDFSRCPLTILELPFNGYSSLVYLDASHgKLVSLKDAMLESLvNLETLNISYnHFVQI 700
                 577899999988877555..666667655.99999999999999999999999999999987469999999999988999999864133344 PP

  == domain 3  score: 8.6 bits;  conditional E-value: 0.00075
       LRR_5   3 IgsyaFyncnltsitipssvtsIgeyaFsnctslksitlps.slteigsyaFsncssltsiti........pssltsigeyaFsncsslkeitlpsnlt 92 
                 I+++ F   + t ++++    +I e  F++ +sl  ++ +  +l ++++ + ++  +l++++i        p+s++++ +  F +c++++   ++ +l+
  EPX74104.1 630 ISHHEFPCRSATYLDFSRCPLTILELPFNGYSSLVYLDASHgKLVSLKDAMLESLVNLETLNIsynhfvqiPDSISHLRNLKFLYCTNCEISYVSPELS 728
                 666677767899999999999999999999999*9999988569*********9999*99999888888889999999999999999999999999999 PP

       LRR_5  93 tigssaFsncslesit.ipssv 113
                 ++++    +++ ++i+ +p++v
  EPX74104.1 729 KLSKLTLLDMHANNIKaFPEEV 750
                 8888877777666664355555 PP

  == domain 4  score: 2.9 bits;  conditional E-value: 0.046
       LRR_5  64 ipssltsigeyaFsncsslkeitlpsnlttigssaFsncslesit.ipssvtki 116
                 ip+s++++ +  F +c++++   ++ +l+++++    +++ ++i+ +p++v +i
  EPX74104.1 700 IPDSISHLRNLKFLYCTNCEISYVSPELSKLSKLTLLDMHANNIKaFPEEVWQI 753
                 444444444444444444444444444444444444443333332233333333 PP

  == domain 5  score: 3.3 bits;  conditional E-value: 0.033
       LRR_5  66 ssltsigeyaFsncsslkeitlpsn.lttigssaFsncslesitips 111
                 + lt+i++   +n s+l+++ l+ n l++i+ s+ s  sle++ ++ 
  EPX74104.1 842 NYLTEIPSAFLQNFSHLNHMFLSGNkLSNISISSNSRISLETLYVNG 888
                 34666666666666666666665433666666666666666655543 PP

>> LRR_9  Leucine-rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.6      0.26   5.8e+02      53     125 ..     419     489 ..     407     500 .. 0.73
   2 ?    5.7   2.1    0.0042       9.5      62     125 ..     547     608 ..     523     629 .. 0.74
   3 ?   11.0   0.5   9.8e-05      0.22      40     124 ..     683     765 ..     668     771 .. 0.84
   4 ?    1.7   0.1      0.07   1.6e+02      85     128 ..     805     847 ..     785     863 .. 0.84
   5 ?    2.9   0.3     0.031        69      66     104 ..     881     918 ..     866     971 .. 0.73

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.26
       LRR_9  53 dirkldgfPllkrlktlllnnnrivriaegleevlPnleelvltnnelqeladldPlaslkklellsllknpv 125
                 ++  +  +P+ + l +l +++n  + +  ++ e   nl+ l ++nn     +  +Pl  l++le+l + +n +
  EPX74104.1 419 EVIPIKFYPHAHELISLNISSNLSLELPLDFMERCVNLKILDMSNNLRPPRG--KPLSILRRLEVLNVSRNDI 489
                 5556667788888888888888888888888888888887777776555444..4888888888888777765 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0042
       LRR_9  62 llkrlktlllnnnrivriaegleevlPnleelvltnnelqeladldPlaslkklellsllknpv 125
                  l  l++l l+ n +  + +++++ l nl+el l++n l     ++ l sl+kle++ l  n++
  EPX74104.1 547 ELSSLEILNLSHNNLYEVCPEIDQ-LGNLKELYLQSNDLSGH-LIQQLGSLRKLEIIDLRFNSL 608
                 367888999999999999999987.78999999999998653.356888888888887766655 PP

  == domain 3  score: 11.0 bits;  conditional E-value: 9.8e-05
       LRR_9  40 tldqfdtidlsdndirkl.dgfPllkrlktlllnnnrivriaegleevlPnleelvltnnelqeladldPlaslkklellsllknp 124
                 +l  ++t+++s n   ++ d++ +l+ lk l+  n  i  ++++l++ l +l+ l +  n+++ + +   + ++++l+++ l +n 
  EPX74104.1 683 SLVNLETLNISYNHFVQIpDSISHLRNLKFLYCTNCEISYVSPELSK-LSKLTLLDMHANNIKAFPE--EVWQISSLKIVNLSSNI 765
                 5567899*******9998689************************86.899***********99887..67777777777776665 PP

  == domain 4  score: 1.7 bits;  conditional E-value: 0.07
       LRR_9  85 evlPnleelvltnnelqeladldPlaslkklellsllknpvtnk 128
                  + P++eel+l +n+l + +  + l  +k+l++l l  n +t+ 
  EPX74104.1 805 YIYPSVEELILVDNRLGDECF-KLLSFFKELRILNLSYNYLTEI 847
                 4679************99885.8899999999999988887765 PP

  == domain 5  score: 2.9 bits;  conditional E-value: 0.031
       LRR_9  66 lktlllnnnrivriaegleevlPnleelvltnnelqela 104
                 l+tl++n nri    ++ e    +l+ l + nn+lq+l+
  EPX74104.1 881 LETLYVNGNRISSFPKN-ETLSRSLRYLDFGNNNLQSLT 918
                 789********987654.555567888899999999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1689 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       624  (0.0348039); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 1.08u 0.35s 00:00:01.43 Elapsed: 00:00:00.58
# Mc/sec: 8734.35
//
Query:       EPX74105.1  [L=131]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-17   63.1   0.1      5e-17   62.3   0.1    1.4  1  DUF2406   Uncharacterised protein (DUF2406)


Domain annotation for each model (and alignments):
>> DUF2406  Uncharacterised protein (DUF2406)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.3   0.1   2.8e-21     5e-17       1      63 [.      14      73 ..       6      74 .. 0.76

  Alignments for each domain:
  == domain 1  score: 62.3 bits;  conditional E-value: 2.8e-21
     DUF2406  1 AvseaqPfeqaadklslaalrsiqr.sy...kDvfGkeiadpDlSNPtRsRdERPLdTIRsFeaaie 63
                A++e +P e aa+       ++ ++ s    kD +G++i++pD+SNPtR R+ERPLdT+R+++  ie
  EPX74105.1 14 AITEPEPYELAAM-------QKGKHvSAllpKDYYGQPIDEPDVSNPTRWRYERPLDTVRAWQFLIE 73
                4555555555555.......44444333566******************************999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       344  (0.0191868); expected 358.6 (0.02)
Passed bias filter:                      284  (0.0158403); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.21s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 1014.68
//
Query:       EPX74106.1  [L=87]
Description: hypothetical protein SOCG_05108 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
       0.17   11.6   2.5       0.17   11.6   2.5    1.1  1  Tetraspanin  Tetraspanin family


Domain annotation for each model (and alignments):
>> Tetraspanin  Tetraspanin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   2.5   9.5e-06      0.17      62     105 ..       6      49 ..       4      84 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 9.5e-06
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--HH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Tetraspanin  62 llgflGcigalkenkcllltfsllllvlfllelaagilgfvfsd 105
                   lg+lG + ++ +  +  ++fs++  ++fl +l+  +++f+f++
   EPX74106.1   6 CLGYLGYLVSIEQLEWYFFFFSIYFSIFFLHFLVPFFFLFFFES 49 
                  5899*********************************9999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       581  (0.0324056); expected 358.6 (0.02)
Passed bias filter:                      208  (0.0116013); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.25s 00:00:00.61 Elapsed: 00:00:00.41
# Mc/sec: 641.96
//
Query:       EPX74107.1  [L=134]
Description: cell wall organization protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.4e-08   33.5   8.0    2.9e-07   31.2   8.0    2.0  1  RCR       Chitin synthesis regulation, resistance to Congo re
  ------ inclusion threshold ------
      0.016   15.0   0.1      0.019   14.8   0.1    1.1  1  DUF3328   Domain of unknown function (DUF3328)


Domain annotation for each model (and alignments):
>> RCR  Chitin synthesis regulation, resistance to Congo red
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2   8.0   3.2e-11   2.9e-07       1      70 [.      16      79 ..      16     133 .. 0.78

  Alignments for each domain:
  == domain 1  score: 31.2 bits;  conditional E-value: 3.2e-11
         RCR  1 RWvlfaiiivlillvllltlrvakrRrrrGlqplygtgWlvsapppPsYgqsqqqynqaesltsatvpty 70
                RWv+++i++++++ +++++  v++rR r+Gl+ +  t +  +  +pP Y++ +++      + ++t +++
  EPX74107.1 16 RWVIVVICVLFLISFFISIGYVNRRRNRNGLNTIPFTNFY-PLSTPPVYSPRPNPPP----NVNTT-TPF 79
                9**************************************9.999******9988432....22222.223 PP

>> DUF3328  Domain of unknown function (DUF3328)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.1   2.1e-06     0.019       3      80 ..       4      98 ..       2     112 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 2.1e-06
     DUF3328  3 prkrssawrrl...lllvlllllllllllilssllsssekkaak...........kkspsspspaldaieyelkqfk...lgskeapsiyrgeps 80
                ++  +++w+ +   +++v+ +l+l+ +++ + ++  +++++  +           +++++sp p  +    ++++f     g + +p+ yr +p+
  EPX74107.1  4 QQGNTYNWSAYgrwVIVVICVLFLISFFISIGYVNRRRNRNGLNtipftnfyplsTPPVYSPRPNPPPNVNTTTPFMpgmSGAFVTPQVYRPPPT 98
                56679999999999999999999999999999999999999999999999999555555555555555555555555998888888888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       742  (0.0413855); expected 358.6 (0.02)
Passed bias filter:                      540  (0.0301188); expected 358.6 (0.02)
Passed Vit filter:                        92  (0.00513135); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 990.58
//
Query:       EPX74108.1  [L=716]
Description: cytoplasmic proline-tRNA ligase Prs1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.5e-24   86.0   0.7    4.5e-24   84.4   0.3    2.0  2  ProRS-C_1       Prolyl-tRNA synthetase, C-terminal
    1.3e-19   70.2   0.0    2.6e-19   69.2   0.0    1.6  1  HGTP_anticodon  Anticodon binding domain
    1.5e-17   64.1   0.0    3.5e-17   62.9   0.0    1.5  1  tRNA-synt_2b    tRNA synthetase class II core domain (G, H, P
    4.2e-16   59.1   0.5    7.4e-16   58.3   0.5    1.4  1  tRNA_edit       Aminoacyl-tRNA editing domain


Domain annotation for each model (and alignments):
>> ProRS-C_1  Prolyl-tRNA synthetase, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.78   3.5e+03      29      59 ..     160     190 ..     146     195 .. 0.72
   2 !   84.4   0.3     1e-27   4.5e-24       1      69 []     626     716 .]     626     716 .] 0.97

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.78
                 HHHHS-EEEEEESSB.-SSCCCSB-TTT-SB- CS
   ProRS-C_1  29 keetgakslcipfdq.epseegtkCivcgkpa 59 
                 k  +ga+ +++ f    + +e++k ++++k+a
  EPX74108.1 160 KT-IGATPVVVDFSAsAKPAEQSKPAATQKKA 190
                 43.59999999998654556777777787777 PP

  == domain 2  score: 84.4 bits;  conditional E-value: 1e-27
                 HHHHHHHHHTT-EEEEEESSGHHHHHHHHHHH.................S-EEEEEESSB.....-SSCCCSB-TTT-SB-SEEEEEE-B- CS
   ProRS-C_1   1 weefkealekkgfvlapWcgeeecEekIkeet.................gakslcipfdq.....epseegtkCivcgkpakkwvlfgrsY 69 
                 we+f++al+kk++vl+pWc+++ cE++Ik+++                 gakslcip++q        e+ tkC++cg  ak w lfgrsY
  EPX74108.1 626 WEDFVPALNKKNLVLIPWCNTTPCEKDIKKNSarqangdepedekapsmGAKSLCIPLEQptgedAIVENVTKCAACGSHAKVWGLFGRSY 716
                 9**********************************************************99998777789********************* PP

>> HGTP_anticodon  Anticodon binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.2   0.0   5.8e-23   2.6e-19       1      93 [.     500     599 ..     500     600 .. 0.95

  Alignments for each domain:
  == domain 1  score: 69.2 bits;  conditional E-value: 5.8e-23
                     SEEEEESSSS.......HHHHHHHHHHHHHHHHTTTSEEEEESSSSTHHHHHHHHHHTT-SEEEEE-HHHHHHTEEEEEETTTCEEEEEETTHHH CS
  HGTP_anticodon   1 qvvviplnek.......aeeleeyakklaeeLraagirvelddsnesigkkireadllgipfavvvGekelekgtvtvrdrdtreqervsldelv 88 
                     q vv+p++ +       ++++e ++ +la++L +a+ir+e d +++++g+k+++++++g+p++++ G+++++k++vt  +rdt e++ v+ld+l+
      EPX74108.1 500 QTVVVPCGITnkttdeeRKNIEGFCAQLASRLIDADIRAEADLRSYTPGYKFAHWEMKGVPLRLEFGPNDAKKNQVTAVRRDTFEKIAVPLDNLE 594
                     66899999988999999889**************************************************************************9 PP

                     HHHHH CS
  HGTP_anticodon  89 eklke 93 
                     + +++
      EPX74108.1 595 QRISD 599
                     99875 PP

>> tRNA-synt_2b  tRNA synthetase class II core domain (G, H, P, S and T)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.9   0.0   7.8e-21   3.5e-17       8     155 ..     304     453 ..     298     465 .. 0.88

  Alignments for each domain:
  == domain 1  score: 62.9 bits;  conditional E-value: 7.8e-21
                   SEEEEE-SSSHHHHHHHHHHHEEEB.GGSSEEEEEEEEEEBTTTSTBCTTTB-SEEEEEEEEEEES.GGGHHHHHHHHHHHHHHHHHHTT.SCEEEE CS
                   xxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2b   8 dreyiLkPtneetfvelirdevlrs.krLPlklyqiqtkyRdEksdsrGLlRvreFhqkdgyvfha.easlddslrdlikaisriferlglefraii 102
                   ++  +++Pt+e+ ++  + ++ +rs ++LPl+l q  ++ R E ++ ++ lR reF +++g+  h   +s+++++++++ +++r++++l+  + +++
    EPX74108.1 304 EEPIAIRPTSETVMYPYYAKW-IRShRDLPLRLNQWNSVVRWEFKNPQPFLRTREFLWQEGHTAHMtLESANEEVYQILDLYARVYSDLL-AVPVVR 398
                   66789**************98.***555*****************999******************779*******************98.456777 PP

                   EE...GTTSCBTTSEEEEEEEEETTTSEEEEEEEEEEEETHHHHHTTEEEECTTSS CS
                   xx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2b 103 el...msaksadykdkkefeavsesltkgieigtiqklgtrlserlgatvldennr 155
                   ++   ++ k a +  ++ +e + +  ++gi+ gt ++lg+++s+ +++ v d n +
    EPX74108.1 399 GIkseNE-KFAGGMFTTTVEGYIPTTGRGIQGGTSHGLGQNFSKMFNIVVEDPNAE 453
                   7743244.33777889999*****************************99887765 PP

>> tRNA_edit  Aminoacyl-tRNA editing domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.3   0.5   1.7e-19   7.4e-16       5     119 ..      31     154 ..      28     158 .. 0.92

  Alignments for each domain:
  == domain 1  score: 58.3 bits;  conditional E-value: 1.7e-19
   tRNA_edit   5 ktieelaaalgvdpsaiaKtlvlkd..kkge...lvlvllpgdreldlkklakllgakklrlaseeelrellgvepGgvgPlglk...aagvpvllDes 95 
                 + +e+l +  +v+++ ++Kt+vlk   +k++   ++lv++ +++++   ++ak++gak++rla ++ ++e++g++p  +g ++++   a +v+v+lD+ 
  EPX74108.1  31 AWSETLSSLNNVPSHTLTKTVVLKPktAKSQavvPILVVALESTSTPSGAAAKAVGAKEARLAAADLVEEVFGIPPADIGVFSVNeqnASKVHVVLDKN 129
                 55688999999*************9765555899***************************************************************** PP

   tRNA_edit  96 lkeyp.tvvvgagengatlelsped 119
                 l ++   ++v++ ++++tl++s ++
  EPX74108.1 130 LINHGgLLAVHPSSSEKTLFVSAAA 154
                 *****99************999775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (716 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       547  (0.0305092); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.64u 0.34s 00:00:00.98 Elapsed: 00:00:00.49
# Mc/sec: 4374.95
//
Query:       EPX74109.1  [L=276]
Description: tRNA-splicing endonuclease catalytic subunit Sen34 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.8e-12   47.2   0.0    5.6e-12   45.6   0.0    1.8  2  tRNA_int_endo   tRNA intron endonuclease, catalytic C-termina
  ------ inclusion threshold ------
      0.071   13.0   0.1       0.13   12.2   0.1    1.4  1  Arm-DNA-bind_2  Arm DNA-binding domain
       0.19   11.6   0.7       0.45   10.4   0.7    1.6  1  WD40_alt        Alternative WD40 repeat motif


Domain annotation for each model (and alignments):
>> tRNA_int_endo  tRNA intron endonuclease, catalytic C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       1.2     7e+03      25      41 ..      68      81 ..      63     113 .. 0.61
   2 !   45.6   0.0   9.3e-16   5.6e-12       4      79 ..     174     249 ..     172     254 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 1.2
                   TSSEEEETSCTTTSSCS CS
  tRNA_int_endo 25 GadFrvYqrrpslehse 41
                   Ga F++    ++++h e
     EPX74109.1 68 GAAFIIN---DGNVHEE 81
                   4555553...3344433 PP

  == domain 2  score: 45.6 bits;  conditional E-value: 9.3e-16
                    HHHHHHHHHHTT-EEEECGGGTSSEEEETSCTTTSSCSEEEEEEETTSEEEHHHHHHHHHHHHHTTSEEEEEEETT CS
  tRNA_int_endo   4 kyavyrdLrekGyvvrsGlkFGadFrvYqrrpslehseylVvvvsedeeldwpdlsaavrlahsvkKklilaivda 79 
                    +y +++ L  +G+++++Gl+FG+dF+ Y ++  + hs++lV  ++ ++e+++  l++ +rl ++vkK +++  +++
     EPX74109.1 174 RYLIFESLVMNGFFLNPGLRFGCDFVAYPGDALRFHSHFLVNGYNWNDEIPLLLLIGGGRLGTGVKKAWLIGGEQE 249
                    899999**************************************************************99887654 PP

>> Arm-DNA-bind_2  Arm DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   2.1e-05      0.13      29      62 ..     108     140 ..      97     142 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2.1e-05
  Arm-DNA-bind_2  29 lpdtpanrKkaerllaeIeeeIalGtFdYakyFP 62 
                        t++n Kk++ + ++I++eI l+t +Y+ ++P
      EPX74109.1 108 TARTKENEKKIQ-IMKKINKEIPLDTLEYDSTKP 140
                     5679******97.7789**************999 PP

>> WD40_alt  Alternative WD40 repeat motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.7   7.5e-05      0.45      13      36 ..     104     127 ..      95     128 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 7.5e-05
    WD40_alt  13 qeqlkvrvseLeeEVrtLrKInkd 36 
                   +l+ r+ e e  +++++KInk+
  EPX74109.1 104 EQMLTARTKENEKKIQIMKKINKE 127
                 46899******************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (276 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       903  (0.0503653); expected 358.6 (0.02)
Passed bias filter:                      540  (0.0301188); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2047.47
//
Query:       EPX74110.1  [L=680]
Description: leucine carboxyl methyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.8e-20   71.8   0.0    1.1e-19   71.2   0.0    1.3  1  LCM        Leucine carboxyl methyltransferase
    5.5e-06   26.3   1.2    0.00078   19.4   0.0    3.4  3  Kelch_4    Galactose oxidase, central domain
    0.00038   20.0   3.2       0.14   11.7   1.1    3.4  4  Kelch_1    Kelch motif
     0.0048   17.1   5.4       0.66   10.4   0.9    3.9  3  Kelch_6    Kelch motif
  ------ inclusion threshold ------
      0.063   13.5   0.2       0.21   11.8   0.3    1.8  2  RNase_3_N  Ribonuclease III N-terminal domain


Domain annotation for each model (and alignments):
>> LCM  Leucine carboxyl methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.2   0.0     3e-23   1.1e-19      28     187 ..      23     211 ..       6     212 .. 0.86

  Alignments for each domain:
  == domain 1  score: 71.2 bits;  conditional E-value: 3e-23
                 CCHHHHHHHH.CHCCCHCHHCHG.CHCCCCT--HHHHHHHHHHHHHHHHHHHHHHHCTT..ESEEEEET-TT--HHHHHHHTT......TEEEEEEE-H CS
         LCM  28 lvsaaglell.erkadkelekek.eeekkekkapelnrgiavRtrffddllkaalsaag..irqvViLGAGlDtrayRlpwla......glkvfEvDqp 116
                 ++s+a++e +     +ke+++ k + +k+ +++p +nrg++ R  +++ +++++++++g   + +V+LGAG+D++a++l          ++++++vD+p
  EPX74110.1  23 ILSKASVEKCcYPGFNKEHSYYKpFITKTPRRSPSVNRGYWTRCIAIRYAVQKFVEKKGgkPKAIVNLGAGYDPLALQLLNSYngqsaeDIVFYDVDYP 121
                 555555555543333444555555788999*************************556668889***************9999999999********** PP

                 HHHHHHHHHHHHSHHHHH.................EECSEEE--TTS.HHHHHHHHHHTT-.TTSEEEEEEESSGGGS-HHHHHHHHHHH CS
         LCM 117 evlefKretlkelgaepk.................aelryvpvDlrd.ddwpeaLaaagfd.pekptawvaeGvlvYLtpeasdalleai 187
                 e +e + + +     ++                  ++ ++v+++l++ d + ++L+++g+d +++  ++++e+  vY++  as++l++++
  EPX74110.1 122 ESIENRVNMIMSDDFLQGiiykndseievhteihtKNYHTVGCNLKElDLLHKKLEECGLDyNNTSILFISEVAAVYMPVSASNSLVKWM 211
                 *********99999888899**********9998778888*******9999**********8888999*******************997 PP

>> Kelch_4  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       2.8     1e+04      19      33 ..     394     407 ..     385     416 .. 0.77
   2 !   19.4   0.0   2.2e-07   0.00078       1      43 [.     424     464 ..     424     470 .. 0.86
   3 ?    3.4   0.8     0.022        79       4      20 ..     642     657 ..     641     659 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 2.8
     Kelch_4  19 GGrgedgtllndlyl 33 
                 GG ++ g +++ ++l
  EPX74110.1 394 GGLSPSG-RSDSAFL 407
                 9999985.8888887 PP

  == domain 2  score: 19.4 bits;  conditional E-value: 2.2e-07
     Kelch_4   1 pRaghsatsipdgtiylfGGrgedgtllndlylldlstntWrr 43 
                 pR++h+++ +++g+  l+GGr +++++l+ +yl+  s++ W++
  EPX74110.1 424 PRVSHAIIPVNNGDYMLIGGRESPNKALDSCYLY--SNGYWKQ 464
                 9********************************6..5666665 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.022
     Kelch_4   4 ghsatsipdgtiylfGG 20 
                 +++++s + + +y+fGG
  EPX74110.1 642 SCQCCSFG-NLLYVFGG 657
                 78999**6.9******9 PP

>> Kelch_1  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.1       2.2   7.8e+03      29      36 ..     273     280 ..     272     280 .. 0.86
   2 !    5.8   0.0    0.0028        10      17      46 .]     441     469 ..     439     469 .. 0.91
   3 ?   -0.6   0.0      0.29     1e+03      17      37 ..     539     560 ..     537     561 .. 0.85
   4 !   11.7   1.1     4e-05      0.14       5      22 ..     643     660 ..     640     677 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 2.2
                 EEEEETTT CS
     Kelch_1  29 vevyDpet 36 
                 vev+D++t
  EPX74110.1 273 VEVFDVCT 280
                 9****976 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0028
                 EEEBCS.SSBEEEEEEEETTTTEEEEECCCS CS
     Kelch_1  17 iGGsdg.gnalssvevyDpetntWrelpsMp 46 
                 iGG+ + ++al+s++ y+  ++ W + +s+p
  EPX74110.1 441 IGGRESpNKALDSCYLYS--NGYWKQEASLP 469
                 99***************9..99999988876 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.29
                 EEEBCS.SSBEEEEEEEETTTT CS
     Kelch_1  17 iGGsdg.gnalssvevyDpetn 37 
                 +GG+d  + +  +v+ + +e++
  EPX74110.1 539 MGGMDKqNHPIEDVWEWKLEKQ 560
                 89****9999999999888776 PP

  == domain 4  score: 11.7 bits;  conditional E-value: 4e-05
                 EEEEEETTEEEEEEEBCS CS
     Kelch_1   5 agavvvggkiYviGGsdg 22 
                 + ++++g+ +Yv+GG++ 
  EPX74110.1 643 CQCCSFGNLLYVFGGGCV 660
                 779************986 PP

>> Kelch_6  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.3   0.0    0.0071        25       2      49 ..     425     471 ..     424     472 .. 0.80
   2 ?   -0.1   0.0      0.35   1.3e+03      24      43 ..     493     512 ..     485     517 .. 0.87
   3 !   10.4   0.9   0.00018      0.66       4      21 ..     642     659 ..     640     663 .. 0.91

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0071
     Kelch_6   2 raghslvsvgg.kiYifGGytdsspylnkvwvydpetksWeqlpplpvp 49 
                 r++h+++ v++   +++GG+  ++++l++ ++y+  ++ W+q ++lp+p
  EPX74110.1 425 RVSHAIIPVNNgDYMLIGGRESPNKALDSCYLYS--NGYWKQEASLPYP 471
                 55666666664345678***999**********6..6********9997 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.35
     Kelch_6  24 spylnkvwvydpetksWeql 43 
                 ++++  +++++ + k W+q+
  EPX74110.1 493 GKPHGGWLIWSEQAKQWSQV 512
                 6788899***********97 PP

  == domain 3  score: 10.4 bits;  conditional E-value: 0.00018
     Kelch_6   4 ghslvsvggkiYifGGyt 21 
                 +++++s g+ +Y+fGG +
  EPX74110.1 642 SCQCCSFGNLLYVFGGGC 659
                 689*************86 PP

>> RNase_3_N  Ribonuclease III N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       3.5   1.3e+04       6      20 ..      65      79 ..      63      80 .. 0.83
   2 ?   11.8   0.3     6e-05      0.21       2      62 ..     307     367 ..     306     376 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 3.5
                HHHHHHHHHHHHHHH CS
   RNase_3_N  6 qviqlEhavtklves 20
                ++i +  av+k+ve+
  EPX74110.1 65 RCIAIRYAVQKFVEK 79
                6789999*****995 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 6e-05
                 S-HHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHSGCSS-GGGHHHHCSHHHHHHHH CS
   RNase_3_N   2 YqysqviqlEhavtklvesykriielspnlktyeealeneeklpveilpalsRykLklAae 62 
                 Y + q  ++ ha + + ++y+ + +  p ++ y  +++ +e  pv+   +ls++++kl + 
  EPX74110.1 307 YFFLQHYSIQHASSSMSQMYNMVEHPNPYMQYYRYQINGNEISPVHCRTQLSKKRMKLTTV 367
                 77788899********************************************999998654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (680 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       719  (0.0401026); expected 358.6 (0.02)
Passed bias filter:                      484  (0.0269954); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.67u 0.25s 00:00:00.92 Elapsed: 00:00:00.45
# Mc/sec: 4518.16
//
Query:       EPX74111.1  [L=569]
Description: endonuclease Uve1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     7e-108  360.1   0.0   9.9e-108  359.6   0.0    1.2  1  UvdE      UV-endonuclease UvdE
  ------ inclusion threshold ------
       0.16   11.5   0.3       0.31   10.6   0.3    1.5  1  zf-FLZ    zinc-finger of the FCS-type, C2-C2


Domain annotation for each model (and alignments):
>> UvdE  UV-endonuclease UvdE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  359.6   0.0  1.1e-111  9.9e-108       1     275 [.     206     482 ..     206     483 .. 0.99

  Alignments for each domain:
  == domain 1  score: 359.6 bits;  conditional E-value: 1.1e-111
        UvdE   1 lGyvclavelrnaspavtlsrtrrlklikrerkeklkelakaNlkdllkllkynaaygirllRlSSslvPlashpevgykletalaeeleevGelakel 99 
                 lGy+cl++ lr  +++ ++srt+r+++i++e +++ k+l+ +N kdl  l+++n+ +gi+++R+SS+l+P+ash  +gy+le  + + l++vGela+++
  EPX74111.1 206 LGYACLNTVLRLSKESAFCSRTCRIATIQKESLQFAKDLGIKNTKDLATLIEWNHRFGIHFMRVSSDLFPFASHGIYGYSLE-YADSYLQAVGELANKY 303
                 8********************************************************************************9.99************** PP

        UvdE 100 glRltfHPeqftllnSdrkevtesairdlayHdklldalklaeqq..davliiHvGGkfgdkeaalerfkenikrlpdsvkerlvLENDdksytvadlL 196
                 ++Rl++HP+q+t+++S++ +v+e+airdl yH+++l+++kl++q   dav+i+H+GG f++k+++l rf+en++rlp+ vk+rlvLENDd++++v+dlL
  EPX74111.1 304 NHRLSTHPGQYTQIASPKASVVENAIRDLCYHEEMLSRMKLNKQLncDAVIILHLGGSFEGKDETLSRFRENYARLPEAVKRRLVLENDDVTWSVQDLL 402
                 ********************************************999**************************************************** PP

        UvdE 197 pvceelniPlVlDyHHhnvld..lreesldeslplveriveTWerkgikqkvHlSepldgkavrahkdrkhadrvldllea 275
                 p+c+el iPlVlD+HHhnv++  lre++ld++  l+++i+eTW+rkgi+qk+H+Se++ + a++a+k+r h+drv +l+++
  EPX74111.1 403 PLCQELSIPLVLDWHHHNVVPgtLREGTLDLMP-LLPAIRETWTRKGITQKQHYSESAYPLAISAMKRRGHSDRVYSLPPC 482
                 *********************99********99.8********************************************98 PP

>> zf-FLZ  zinc-finger of the FCS-type, C2-C2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.3   3.5e-05      0.31      35      51 ..     220     236 ..     217     239 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 3.5e-05
      zf-FLZ  35 dkaFCSeeCRqqqield 51 
                 ++aFCS  CR   i+ +
  EPX74111.1 220 ESAFCSRTCRIATIQKE 236
                 78********9999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (569 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       968  (0.0539907); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.30s 00:00:00.92 Elapsed: 00:00:00.50
# Mc/sec: 3407.92
//
Query:       EPX74112.1  [L=418]
Description: bouquet formation protein Bqt4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.57   10.0   0.0       0.57   10.0   0.0    2.8  2  KilA-N    KilA-N domain


Domain annotation for each model (and alignments):
>> KilA-N  KilA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   3.2e-05      0.57       7      34 ..      60      87 ..      55     135 .. 0.81
   2 ?   -4.5   3.3         1   1.8e+04      48      48 ..     240     240 ..     168     283 .. 0.59

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 3.2e-05
      KilA-N  7 eiiirrvkdgyinatkllkaaaedtkri 34
                ++++r  k+  i+at+++++a +++k+ 
  EPX74112.1 60 HFLMRMAKNSNISATSMFRSAFPKAKQE 87
                6799999**************8888773 PP

  == domain 2  score: -4.5 bits;  conditional E-value: 1
      KilA-N  48 e 48 
                 +
  EPX74112.1 240 A 240
                 0 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (418 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2117  (0.118077); expected 358.6 (0.02)
Passed bias filter:                      656  (0.0365888); expected 358.6 (0.02)
Passed Vit filter:                        92  (0.00513135); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.85u 0.34s 00:00:01.19 Elapsed: 00:00:00.49
# Mc/sec: 2560.90
//
Query:       EPX74113.1  [L=766]
Description: ClC chloride channel [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.5e-84  282.4  30.2    5.8e-84  282.3  27.5    1.9  2  Voltage_CLC  Voltage gated chloride channel
    3.6e-08   33.7   0.0     0.0033   17.8   0.0    2.6  2  CBS          CBS domain


Domain annotation for each model (and alignments):
>> Voltage_CLC  Voltage gated chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0     0.037   3.3e+02     163     195 ..      78     110 ..      46     125 .. 0.77
   2 !  282.3  27.5   6.5e-88   5.8e-84       2     352 ..     157     539 ..     156     541 .. 0.88

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.037
                  GHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH CS
  Voltage_CLC 163 elilfvllGilgGllgalfvrlllkverlfrkl 195
                  ++++++++G+ +G+ +++ + ++ +++ ++r +
   EPX74113.1  78 SWFIVCIIGVSIGASAYMLNVITSFLSDIRRGY 110
                  345678999999999999999999999887765 PP

  == domain 2  score: 282.3 bits;  conditional E-value: 6.5e-88
                  HHHHHHHCCCCC-GGGSC-SHHHHHHHCTTSS--..-HHHHHHHHHHHHHHHHCTT-S-BTHHHHHHHHHHHHHHHH...HHTT.--SHHHHHHHHHH CS
  Voltage_CLC   2 ggllagllvklvapeaagsGipevkaalngvkgp..lslrvllvkflasvltvgsGlslGreGplvqiGAavgsgls...rllklsrndrdrrlvaaG 94 
                  +++++++ v+ + p aagsGi+e+k+++ng+++   +s+rvllvk++ + lt++sGls+G+eGp+v++++a+g+ ++   r+lkl++ +  r + ++ 
   EPX74113.1 157 FIIISAVAVRDLSPLAAGSGISEIKSIINGFSRDefVSFRVLLVKCVCLPLTIASGLSVGKEGPSVHLATAMGHFIAsvfRRLKLHSVS-FRDIYVSS 253
                  78999****************************9*******************************************777668987777.888***** PP

                  HHHHHHHHHT-HHHHHHHHCTTTSTSS--TTHHHHHHHHHHHHHHHHHHCTTS-S....-.T---...--GGGHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Voltage_CLC  95 aAAGiAAaFnaPlgGvlfalEevsrefslrallpvfvasvvaalvlrlllgeepa....fgeveslfalsllelilfvllGilgGllgalfvrlllkv 188
                  aAAG+A+aF++P+gGvlf++Ee+++ +++++++++f ++++a  +l+ll+  ++     f+ v    +++++e+++f +lGi+gGl+g + +rl++k+
   EPX74113.1 254 AAAGVAVAFGSPIGGVLFGIEEMASGYTSKMIWYTFSCCLFAVATLHLLNPFRTGqlvlFE-VRYSGSWHFFEFLYFSILGIFGGLYGEFVMRLFIKI 350
                  *************************************************665543455555.665559****************************** PP

                  HHHHHCHHCHHHHHHHHHHHHHHHHHHHCCCSCC.CSSSSCCHHHHHC.TT-S-...............HHHHHH...HHHHHHHHHHHHHCTT-CSB CS
  Voltage_CLC 189 erlfrkleklkikkrlepalvgllvgllglllpasvlgggyeliasll.egstl...............llsllllllllllkllataltlgsgvpgG 270
                  +++++ +   ++++++ + +++++++l+++l  + +l+  ++l  +ll +++                   + l+ll+ +ll+++++a+++g++vp+G
   EPX74113.1 351 QKWRKVF--VDKWPVMDASIIVIVTALVSYLN-T-WLKLDMTLGMELLfQDCKAmntpelndlcnssneGKNSLILLTSTLLRMIFVAFSYGVKVPAG 444
                  **88766..77788889999999999999996.3.56666655333331332224444555555555557788899********************** PP

                  SHHHHHHHHHHHHHHHHHHHHHH-C............TSSC....HHHHHHCCTHHHHHCCS-HHHHHHHHHHCC--GCCHHHHHHHHHHHHHHH CS
  Voltage_CLC 271 ifaPsLviGAalGrlvglvlalllp............gaass.dpgafalvGmaaflagvtrapltaiviviEltgdlelllplmlavliAkava 352
                  if+Ps+++GA++Gr+vgl++++l+             g+ s+ +pg++al+G+aa l+g++++++t++vi++Eltg+l+++lp++l+v+iA+ v+
   EPX74113.1 445 IFVPSMAVGATFGRMVGLFADILYRkfpnlsifsachGSGSCiTPGTYALLGAAASLSGMMHLTMTVVVIMFELTGALNFILPTVLVVAIANSVG 539
                  **********************966777999999**9888999************************************************9986 PP

>> CBS  CBS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   3.7e-07    0.0033       1      54 [.     576     632 ..     576     635 .. 0.81
   2 !   13.1   0.0   1.1e-05     0.099       8      52 ..     680     723 ..     674     727 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 3.7e-07
                 HHHHSBSSCEEEETT.SBHHHHHHHHHHHTSSEEEEEETTT..BEEEEEEHHHHHHH CS
         CBS   1 Vgdimtrdvvtvppd.ttleealelmrekgvsrlPVVdedg..klvGivtlrDllra 54 
                 V+ im+++++ +p +  t + ++++m+++ +s++P+V++ +  +l+G++ ++ ++ a
  EPX74113.1 576 VTTIMSKNIIAIPSNgITWRWLFRTMKSYPFSGYPIVNNTKsfELIGYIKRSSIMLA 632
                 6789***********6667777788*77779******5444457********99977 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 1.1e-05
                 SCEEEETTSBHHHHHHHHHHHTSSEE.E.EE..ETTTBEEEEEEHHHHH CS
         CBS   8 dvvtvppdttleealelmrekgvsrl.P.VV..dedgklvGivtlrDll 52 
                 ++++v  +++++ +  l+      +l P V+  ++dg l+G++t++Dll
  EPX74113.1 680 QPISVLYNQSVSNVSTLF--Q---ALcPkVIhvEKDGVLIGLITRKDLL 723
                 678888888888888888..4...444445455***************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (766 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       679  (0.0378716); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.28s 00:00:00.90 Elapsed: 00:00:00.46
# Mc/sec: 5001.86
//
Query:       EPX74114.1  [L=394]
Description: alpha-1,2-mannosyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     1e-116  389.8  15.2   1.3e-116  389.4  15.2    1.0  1  Glyco_transf_15  Glycolipid 2-alpha-mannosyltransferase
  ------ inclusion threshold ------
        9.4    6.2   5.7        2.4    8.1   1.3    2.1  2  Herpes_US9       Alphaherpesvirus tegument protein US9


Domain annotation for each model (and alignments):
>> Glyco_transf_15  Glycolipid 2-alpha-mannosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  389.4  15.2  1.5e-120  1.3e-116      37     323 ..      53     341 ..      36     342 .. 0.93

  Alignments for each domain:
  == domain 1  score: 389.4 bits;  conditional E-value: 1.5e-120
  Glyco_transf_15  37 efkpkslvnrgrkPiedene.......nAtllalvrnselakilrsikkvekrFnkkfnYpyvfindepftekfkekieklveeadvefgeipk 123
                       f         + P +++++       nA++++l+rn++l+++++s++++e+rFn+k++Yp+vf+nde+f+e+f ++i+++ + + vefg+ipk
       EPX74114.1  53 YFDR------SSVPNPERSQwlpdgrvNAAFVSLARNEDLRDMVQSVQRLERRFNHKHHYPWVFLNDEEFNEEFMRRINETAS-GPVEFGVIPK 139
                      3333......33343333334556666********************************************************.********** PP

  Glyco_transf_15 124 eewsyPefideekaakareelad..iaygdsesyrhmcRyysGlfykhellkkydyYwRvePdiklycdieyDvfkymkdekkiygFtlslkei 215
                      e+w++Pe +d +k +   ++l +  i y+dsesyrhmcR++sG+fy+h+l+kky+yYwRveP++++ cd+++D f ymk+++k+ygFt++++e+
       EPX74114.1 140 EHWQMPETVDLQKMHDNWNKLKEndILYADSESYRHMCRFESGFFYRHPLVKKYEYYWRVEPSVDFWCDLDFDPFAYMKQNNKVYGFTITVTEY 233
                      ***************9999998778********************************************************************* PP

  Glyco_transf_15 216 eetiktlWdstkkflkenkefieeknslsflsdddqdtynlCeFwsnfeigdldffrseayekfFeylDskGgffYerWgdapvhsiavslllp 309
                       eti tlW++t++flk++++ ++ +nsl+f+sd++++tyn+C+Fwsnfei+ +df+ s+ay+k+F++lD++ gffYerWgdapvhsia++l+ +
       EPX74114.1 234 PETISTLWENTRNFLKQHPDTLHPNNSLNFISDNNGETYNNCHFWSNFEIARVDFWESDAYTKYFDHLDKSNGFFYERWGDAPVHSIAAALFTD 327
                      ********************************************************************************************** PP

  Glyco_transf_15 310 kdkihffedigysh 323
                      +d+ihff++igy h
       EPX74114.1 328 RDSIHFFNEIGYWH 341
                      ************88 PP

>> Herpes_US9  Alphaherpesvirus tegument protein US9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   1.3   0.00026       2.4      24      45 ..       2      24 ..       1      37 [. 0.83
   2 ?   -0.9   0.2      0.17   1.5e+03       8      19 ..     114     125 ..     112     129 .. 0.79

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00026
  Herpes_US9 24 klrrRk.krtfCvitliivllvA 45
                +l +Rk kr f  +tli++l++ 
  EPX74114.1  2 VLFHRKfKRVFIAVTLIACLVFL 24
                688998899************95 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.17
  Herpes_US9   8 dEaAdeFLvRiG 19 
                 +E  +eF++Ri 
  EPX74114.1 114 EEFNEEFMRRIN 125
                 677899****95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (394 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       649  (0.0361983); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2776.52
//
Query:       EPX74115.1  [L=177]
Description: glycine decarboxylase complex subunit H [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.9e-40  136.0   0.2    7.5e-40  135.6   0.2    1.1  1  GCV_H          Glycine cleavage H-protein
    0.00055   19.7   0.3    0.00094   19.0   0.3    1.4  1  Biotin_lipoyl  Biotin-requiring enzyme
     0.0086   16.0   0.8      0.016   15.2   0.4    1.6  2  RnfC_N         RnfC Barrel sandwich hybrid domain


Domain annotation for each model (and alignments):
>> GCV_H  Glycine cleavage H-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.6   0.2   1.3e-43   7.5e-40       2     121 ..      54     172 ..      53     173 .. 0.98

  Alignments for each domain:
  == domain 1  score: 135.6 bits;  conditional E-value: 1.3e-43
                 EE-TTSEEEEEETT.EEEEEE-HHHHHHH-SEEEEE---TT-EE-TT-EEEEEEESS-EEEEE-SSSEEEEEE-GGGTT-TTHHHH-TTTTT--EEEEE CS
       GCV_H   2 yytkehewvkveedgvatvGitdfaqeelgdvvfvelpevgtkvkkgeslaavEsvKaasevyapvsGevvevNekleeepeliNkdpyeegWliklkl 100
                 ++tk+he+v+v++d + tvGi+++a++++g+vvfvelpe+g ++++g+ +++vEsvK+as+vy+pv+Ge++evN+ l+++p++  + p +egWl+k+kl
  EPX74115.1  54 RFTKQHEYVQVDGD-MGTVGISEYAAHAVGEVVFVELPEQGSSIEAGDGIGSVESVKSASDVYSPVTGEITEVNKILTDSPQIAGEAPEGEGWLCKVKL 151
                 799**********9.************************************************************************************ PP

                 S-GGGGGGSEEHHHHHHHHHH CS
       GCV_H 101 snleeleeLlsaeeyekllke 121
                 s++eele Ll++e+y ++++e
  EPX74115.1 152 SSPEELEGLLTKEAYDEYCNE 172
                 *****************9976 PP

>> Biotin_lipoyl  Biotin-requiring enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.3   1.6e-07   0.00094      21      57 ..      90     126 ..      72     132 .. 0.88

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 1.6e-07
                    SSTTCEE-TTSEEEEEECTTEEEEEEBSSSEEEEEES CS
  Biotin_lipoyl  21 vkvGdkVkagqvlaeveamKmemeieapkaGvvkeil 57 
                     ++G++++ag+ +  ve+ K   ++ +p++G ++e+ 
     EPX74115.1  90 PEQGSSIEAGDGIGSVESVKSASDVYSPVTGEITEVN 126
                    479*******************************996 PP

>> RnfC_N  RnfC Barrel sandwich hybrid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.75   4.5e+03      71      83 ..      33      45 ..      23      60 .. 0.76
   2 !   15.2   0.4   2.6e-06     0.016      47      88 ..      91     133 ..      79     138 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.75
      RnfC_N 71 asvsGtVkaiekr 83
                +s++G V a + r
  EPX74115.1 33 SSITGSVNAFQWR 45
                6888888876655 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 2.6e-06
      RnfC_N  47 kvgdkVlkGqkiaeaegfvsa.pvhasvsGtVkaiekrlvahg 88 
                 ++g  ++ G+ i++ e++ sa  v+++v+G++++++k+l+ ++
  EPX74115.1  91 EQGSSIEAGDGIGSVESVKSAsDVYSPVTGEITEVNKILTDSP 133
                 68999***********9665528*************9987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       297  (0.0165653); expected 358.6 (0.02)
Passed bias filter:                      269  (0.0150036); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.27s 00:00:00.68 Elapsed: 00:00:00.43
# Mc/sec: 1236.16
//
Query:       EPX74116.1  [L=302]
Description: hypothetical protein SOCG_03329 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       493  (0.0274974); expected 358.6 (0.02)
Passed bias filter:                      154  (0.00858944); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.61u 0.28s 00:00:00.89 Elapsed: 00:00:00.46
# Mc/sec: 1986.16
//
Query:       EPX74117.1  [L=891]
Description: 19S proteasome regulatory subunit Mts4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   5.5e-115  384.0   0.1   8.9e-115  383.3   0.1    1.3  1  RPN1_RPN2_N  RPN1/RPN2 N-terminal domain
    4.3e-25   86.8  20.4    2.3e-05   24.6   0.2    8.7  9  PC_rep       Proteasome/cyclosome repeat
    3.1e-24   84.8   0.3    5.6e-24   83.9   0.3    1.4  1  RPN1_C       26S proteasome non-ATPase regulatory subunit RPN
    1.6e-05   25.2   0.4       0.49   10.8   0.0    3.8  4  HEAT_2       HEAT repeats


Domain annotation for each model (and alignments):
>> RPN1_RPN2_N  RPN1/RPN2 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  383.3   0.1    2e-118  8.9e-115       1     309 []      56     350 ..      56     350 .. 0.99

  Alignments for each domain:
  == domain 1  score: 383.3 bits;  conditional E-value: 2e-118
  RPN1_RPN2_N   1 LellverlkdadaelaklaLeaLkeeirtstssmTSvPkPLKfLrphyetlkeiyetlkkskakklladilsvlamtlsdegkresLkyrlegskedi 98 
                  L++lver+++++ +l+++ L +Lk+ irtstssmT+vPkPLKfLrphy+tl+++++++++   k ++adilsvl+m++sd++kresLkyrl+g ++d+
   EPX74117.1  56 LDMLVERIQEKNLDLMSSILTQLKDIIRTSTSSMTAVPKPLKFLRPHYSTLTKTFDSWSEGPLKVQFADILSVLGMSYSDPSKRESLKYRLHGVTSDP 153
                  89************************************************************************************************ PP

  RPN1_RPN2_N  99 gsWGheYvrhLaaeiaeeyqerqeeekeeetkekkkkvkellelvkeivpfllkhnaeaeAvDLllEvekleklvklvdeenyqrvclYLlscakyla 196
                  + WGheYvrhLaaei++e+ erqe++           +++l++l+  ivpf+l+hnaea+A+DLl E+ ++ek++ +v+++n++rvclY++sc+++l+
   EPX74117.1 154 SVWGHEYVRHLAAEIGAEFVERQEKD---------IATDDLMDLALLIVPFFLTHNAEADAIDLLQELGAVEKVTPYVEADNASRVCLYITSCVNLLP 242
                  *************************9.........899************************************************************ PP

  RPN1_RPN2_N 197 epddvellrvafeiyrklkkyseaLrvalrlndkelvkevfkaaedklvkkQlayllarqqvkleleeledededlneilsneklsehfkaLakdLdv 294
                   p+dv++lr+a+ i rk++++++aL+va+rl+d++l++e+++aaed+l+kkQlay+larq++++++      de+ln+ l+n +ls+hf+ L+k+L +
   EPX74117.1 243 FPEDVAMLRTAHAIHRKFNQLTQALNVAIRLDDMSLIREDCEAAEDPLLKKQLAYILARQRIPFDMG-----DEELNDALNNIHLSDHFHYLGKELSL 335
                  *******************************************************************.....89************************ PP

  RPN1_RPN2_N 295 lepktpediYKshLe 309
                  ++pk pedi+KshLe
   EPX74117.1 336 MDPKVPEDIFKSHLE 350
                  **************7 PP

>> PC_rep  Proteasome/cyclosome repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0         4   1.8e+04      17      25 ..     204     212 ..     199     216 .. 0.78
   2 !   18.9   0.1   3.2e-07    0.0014       1      34 [.     407     439 ..     407     440 .. 0.94
   3 !   15.5   0.1     4e-06     0.018       1      32 [.     441     474 ..     441     477 .. 0.91
   4 !   19.9   0.0   1.5e-07   0.00068       2      21 ..     479     498 ..     478     510 .. 0.85
   5 !   10.1   0.1    0.0002       0.9       2      26 ..     516     540 ..     516     543 .. 0.88
   6 ?   -2.5   0.0         2   9.1e+03      10      16 ..     598     604 ..     597     612 .. 0.71
   7 ?    4.2   0.0     0.015        67       4      32 ..     672     700 ..     670     702 .. 0.90
   8 !   24.6   0.2   5.2e-09   2.3e-05       1      32 [.     704     735 ..     704     738 .. 0.90
   9 ?    0.6   0.1      0.21   9.5e+02       4      16 ..     744     756 ..     744     759 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 4
                 HHHHHHHHH CS
      PC_rep  17 eaislLkpy 25 
                 +ai+lL+++
  EPX74117.1 204 DAIDLLQEL 212
                 799**9875 PP

  == domain 2  score: 18.9 bits;  conditional E-value: 3.2e-07
                 HHHHHHHHHCTTSTCHHHHHHHHHHHHHHSSHHH CS
      PC_rep   1 GAllALGlihaGsgneeaislLkpylsdtsaevr 34 
                 +A++++Gl+ +++ +  ++slL++yl++++ +v+
  EPX74117.1 407 SATASIGLLQLWNVDM-GLSLLDKYLYSSEENVK 439
                 69**************.***********999886 PP

  == domain 3  score: 15.5 bits;  conditional E-value: 4e-06
                 HHHHHHHHHCTTSTCH..HHHHHHHHHHHHHSSH CS
      PC_rep   1 GAllALGlihaGsgne..eaislLkpylsdtsae 32 
                 GAll++G+ +  ++ne  +a+++L++yl   s++
  EPX74117.1 441 GALLGIGITNVAVRNEadPALAILSEYLETGSTK 474
                 9***************************877765 PP

  == domain 4  score: 19.9 bits;  conditional E-value: 1.5e-07
                 HHHHHHHHCTTSTCHHHHHH CS
      PC_rep   2 AllALGlihaGsgneeaisl 21 
                 A+l+LGl++aGs++e+++++
  EPX74117.1 479 AILGLGLAYAGSNREDLLDM 498
                 9**************99987 PP

  == domain 5  score: 10.1 bits;  conditional E-value: 0.0002
                 HHHHHHHHCTTSTCHHHHHHHHHHH CS
      PC_rep   2 AllALGlihaGsgneeaislLkpyl 26 
                 A+l LGli+ G++n+++ s +++ l
  EPX74117.1 516 AALTLGLIFVGTCNGDVASTILQTL 540
                 67779**************999887 PP

  == domain 6  score: -2.5 bits;  conditional E-value: 2
                 CTTSTCH CS
      PC_rep  10 haGsgne 16 
                 +aG+gn 
  EPX74117.1 598 YAGTGNV 604
                 8****98 PP

  == domain 7  score: 4.2 bits;  conditional E-value: 0.015
                 HHHHHHCTTSTCHHHHHHHHHHHHHHSSH CS
      PC_rep   4 lALGlihaGsgneeaislLkpylsdtsae 32 
                 lALGl+ a +   ++++ L+ y +d++ +
  EPX74117.1 672 LALGLLSASNPQMRIFDTLSRYSHDNDLD 700
                 8********9999*********9999865 PP

  == domain 8  score: 24.6 bits;  conditional E-value: 5.2e-09
                 HHHHHHHHHCTTSTCHHHHHHHHHHHHHHSSH CS
      PC_rep   1 GAllALGlihaGsgneeaislLkpylsdtsae 32 
                 +A++A+Gl++aG++n ++ +lL++++s++  e
  EPX74117.1 704 NAIFAMGLVGAGTNNARLAQLLRQLASYYHKE 735
                 59***********************9987665 PP

  == domain 9  score: 0.6 bits;  conditional E-value: 0.21
                 HHHHHHCTTSTCH CS
      PC_rep   4 lALGlihaGsgne 16 
                 +A+Gl+++G g+ 
  EPX74117.1 744 IAQGLLYLGKGTM 756
                 69*******9975 PP

>> RPN1_C  26S proteasome non-ATPase regulatory subunit RPN1 C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.9   0.3   1.3e-27   5.6e-24       1      51 [.     833     882 ..     833     884 .. 0.97

  Alignments for each domain:
  == domain 1  score: 83.9 bits;  conditional E-value: 1.3e-27
      RPN1_C   1 VgqaGkpktItGfqThttPVlLaageRAELateeYiplssvLEgivilkkn 51 
                 VgqaG+pk ItG+ ThttPVlL ++eRAELate Y p++ +LEgivilkkn
  EPX74117.1 833 VGQAGRPKVITGWVTHTTPVLLHHNERAELATEAYTPMT-TLEGIVILKKN 882
                 9************************************97.7*********9 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       1.1   5.1e+03      11      36 ..     286     317 ..     281     325 .. 0.71
   2 !   10.8   0.0   0.00011      0.49       6      58 ..     429     486 ..     424     545 .. 0.78
   3 !    9.9   0.0    0.0002      0.92      14      70 ..     664     728 ..     660     737 .. 0.72
   4 ?   -3.9   0.0         4   1.8e+04      19      32 ..     828     841 ..     823     843 .. 0.63

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 1.1
      HEAT_2  11 dpdpevrraairaLg......rignpealpaL 36 
                  +dp ++++ +  L+      ++g++e+ +aL
  EPX74117.1 286 AEDPLLKKQLAYILArqripfDMGDEELNDAL 317
                 68999999999999966555555555665555 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00011
      HEAT_2   6 qalendpdpevrraairaLg......rignpealpaLvellededpavRraaaeaLgai 58 
                 ++l  +++++v++ a+  +g      r   + al++L e+le+ ++  R++a+  Lg  
  EPX74117.1 429 KYL-YSSEENVKAGALLGIGitnvavRNEADPALAILSEYLETGSTKLRATAILGLGLA 486
                 455.6788899999999999998854333346899999999999999999999999843 PP

  == domain 3  score: 9.9 bits;  conditional E-value: 0.0002
      HEAT_2  14 pevrraairaLg..rignp..ealpaLvellededpavRraaaeaLgaigd....pealpaLkel 70 
                 p +r+a+  aLg  +  np  +++++L ++  d d +v ++a+ a+g +g      + +++L++l
  EPX74117.1 664 PFIRKAVPLALGllSASNPqmRIFDTLSRYSHDNDLDVAYNAIFAMGLVGAgtnnARLAQLLRQL 728
                 56777777888865444555688*************************99522213334444444 PP

  == domain 4  score: -3.9 bits;  conditional E-value: 4
      HEAT_2  19 aairaLgrignpea 32 
                 +a+++ g+ g p++
  EPX74117.1 828 QAVDVVGQAGRPKV 841
                 67777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (891 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       595  (0.0331865); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.73u 0.28s 00:00:01.01 Elapsed: 00:00:00.47
# Mc/sec: 5737.42
//
Query:       EPX74118.1  [L=2191]
Description: morphogenesis protein Mor2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.5e-84  285.0   5.8    3.2e-84  283.8   5.8    1.6  1  MOR2-PAG1_N    Cell morphogenesis N-terminal
    1.6e-63  214.9   1.5      5e-63  213.3   1.5    2.0  1  MOR2-PAG1_C    Cell morphogenesis C-terminal
    8.4e-25   86.7   6.3    2.4e-13   48.7   0.2    3.4  4  MOR2-PAG1_mid  Cell morphogenesis central region
  ------ inclusion threshold ------
      0.093   13.0   0.7        7.6    7.1   0.1    3.8  3  HEAT           HEAT repeat
       0.19   11.1   2.1       0.21   11.0   0.3    2.0  2  PI3Ka          Phosphoinositide 3-kinase family, accessory do


Domain annotation for each model (and alignments):
>> MOR2-PAG1_N  Cell morphogenesis N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  283.8   5.8   9.1e-88   3.2e-84       1     351 [.     130     477 ..     130     530 .. 0.91

  Alignments for each domain:
  == domain 1  score: 283.8 bits;  conditional E-value: 9.1e-88
  MOR2-PAG1_N   1 eRkslvsiyilcrvLieilkqstkeslteelgekLeeivFkqlkkadpeslsssplrlanwnlfAelLGvlSeirFasVsdrFiaeLeklrkeaske. 97 
                  eRk+ +s+yilcr L ei++++++++l+e+ +++L e +F ql +  +  + ss+lrlanw+ fA lLG lS+ +F  VsdrFi+e+e+l+k  + + 
   EPX74118.1 130 ERKNFASVYILCRCLSEITENLPNNTLEENTVSSLLECIFHQLLNPKNLPTCSSSLRLANWESFAYLLGSLSRFNFVMVSDRFIEEIENLEKS-NLDi 226
                  8******************************************************************************************95.3444 PP

  MOR2-PAG1_N  98 ..leaklellirGmrylklkvypeeafeesadFlkslakffeea.kgsevkhAyaellselLlpvaasataevnhpkwaeavellypraakmskkpkh 192
                     ea l+ ++r+m++l++++yp+  +ee++ F++sla+ff ++ +  ++ hAy  l+++lL p+  +at evn+p w+ ++ +lyp a k  +k+k+
   EPX74118.1 227 kvREAYLIYILRAMKHLHIRLYPITHLEECVAFMESLASFFIKSnQALRIEHAY--LFENLLSPLIIHATFEVNIPGWVRTILTLYPIAFKSCSKSKY 322
                  4359**************************************985667888877..9**********************************66666** PP

  MOR2-PAG1_N 193 wnaafpLvttlLCvspkefFlanWlsllesllsklKdkstravalealsrllwvYlyRckeslntttkkLeeilkllfpkgk..rklitpddellepl 288
                  w++ fp+++ lLC+spk+fFl+nWls le+ + ++Kd++ r + l++l+++ wv l+R  e + ++ k ++ i+k +f +gk  + + ++  + +e +
   EPX74118.1 323 WQVWFPFLCSLLCLSPKDFFLENWLSALEASFVRIKDRRLRNTGLKSLAKVFWVCLNRLGECTDEILKDITYIIKPVFFPGKtfNVSPFATVDEVEGF 420
                  ***************************************************************************8886665243333445566799* PP

  MOR2-PAG1_N 289 vqiirfiaskhldfafkniifpllnaelfsssklenlepermiigirAflailsdlekkeqrP 351
                   qi+r+ a +++++++++i+ pll ++++     en+  e+m+i ir+   +l+d++ k+  P
   EPX74118.1 421 SQILRVLAPHYPNYIINEILEPLLIDSFN-----ENMGCEKMMIVIRSSYYVLQDIKLKN-SP 477
                  **************************995.....789*******************9988.34 PP

>> MOR2-PAG1_C  Cell morphogenesis C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  213.3   1.5   1.4e-66     5e-63       1     253 []    1654    1905 ..    1654    1905 .. 0.98

  Alignments for each domain:
  == domain 1  score: 213.3 bits;  conditional E-value: 1.4e-66
  MOR2-PAG1_C    1 pqlFWttvAcLetdfeseFlealelLeklldkldlddpevvevllksqpqkwegdfeglqalvlkGlrssetleatlellskLtklsddelvdssd 96  
                   pqlFWt+vAcL t++e+eFl a+++   +l++ + + pe+ + l++s p++w ++f+glq lvl+G+rs++++e++++l+  L+ + d+++v++ d
   EPX74118.1 1654 PQLFWTSVACLTTVHEEEFLYAVKITYDYLKRTE-HLPEFPQHLIDSLPNSWYEKFDGLQLLVLRGFRSTKSFESSMRLFMLLMTYGDNDIVGNGD 1748
                   9*********************************.8*********************************************************999 PP

  MOR2-PAG1_C   97 srllllilalLPrllqaleeke.edqkvlevAenlaalaeekglenLarvltsyakgrfrtkddflkqvvkalreayfpehesealvlllglleng 191 
                    rl++++l++LP +l+++e+ +    ++ e++++l+++a   + ++L ++++++++++fr++ddflk++v+++ +++f+++  e++++l  +l+n+
   EPX74118.1 1749 FRLVTCLLVSLPAMLTTYETAAkLPFSLDEFCDKLTSFAYLYDNTELIELIKTFMNRQFRSSDDFLKCAVSYITSNFFEDFVLEIITVLSMFLSNS 1844
                   9*****************98874677899******************************************************************* PP

  MOR2-PAG1_C  192 pewlrrktlqiLkvllqeidlrkpaeisslgsdllspllrlletelcseALeVLdevvsvsg 253 
                    +w+r++tl+iL ++l+ ++++++ +  sl+ +l+ pllrll+t+++++AL+ L  ++s+sg
   EPX74118.1 1845 MPWIRKSTLRILDSILPRLQFDNK-TCGSLELNLITPLLRLLSTDYVMDALKLLTIPLSISG 1905
                   **********************88.9999***************************999986 PP

>> MOR2-PAG1_mid  Cell morphogenesis central region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.1   2.9e-06      0.01       8     179 ..     663     847 ..     658     902 .. 0.75
   2 !   48.7   0.2   6.6e-17   2.4e-13     480     709 ..    1142    1377 ..    1136    1412 .. 0.83
   3 ?   -3.6   0.1      0.41   1.5e+03     947     983 ..    1476    1512 ..    1451    1535 .. 0.59
   4 !   26.0   0.0     5e-10   1.8e-06    1052    1099 ..    1567    1614 ..    1549    1623 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 2.9e-06
  MOR2-PAG1_mid   8 eldavgliflssvdvqirhtalellrcvralkndlrdlsvkersdsklknekepifiidvleengddi..vqscywdsgrpydlrresdavpsdvt 101
                    e++++ ++ lss  v+ir+ a+ ll  v+ l+ +   ls+++ +d ++  e+    i+dvl++    i  v+s    +     lr+ ++   +d+ 
     EPX74118.1 663 EIQSLAVLHLSSPSVDIRQFAVALLNDVKKLNTEYLVLSSDNFTDGEVCSEPT---IVDVLKDCDSSIlsVESHLPTAAERSRLRKFINDGTKDML 755
                    7889999**************************************99987653...89*****99999445667777888899***9999999987 PP

  MOR2-PAG1_mid 102 lqsil..esadksrwarclselvkyaaelcpssvqearlevvqrlaqitpvelggkakqsq.dt............eskldqwllyamfacsc 179
                    l+        d s w + + +++k + e  p+++   r  v  +l  it+  l  k ++s+ +             e  l qw ly + ac  
     EPX74118.1 756 LKLATsnSGVDISIWYNLFPKFIKLCFERFPTTMALLRNTVCSKLPSITSKLLS-KIDTSDtNFnlkiavknnefpEYLLVQWKLYLIVACCT 847
                    775543256799**************************99*9999999986554.33333201111111111111144577888888888843 PP

  == domain 2  score: 48.7 bits;  conditional E-value: 6.6e-17
  MOR2-PAG1_mid  480 sgklrvllakvalknllqtnld...lfpacidqcyssd..asiadgyfsvlaevymrqeipkceiqrllslilykvvdqsrkirddalqmletl 568 
                      +k+ ++la+  l+ ll  n d   l+  +i++c+       i+d +f  l+e+ ++ e+ + +i +ll l l k+  ++  +r +a+++l  +
     EPX74118.1 1142 PSKVIINLARKGLRTLLIKNCDyelLLQKVIEKCFAQGiaQHICDFFFLALSEMLIQTEVGHLSIPKLLPLCLVKLSANNLSVRLKAFDLLGKF 1235
                     5678899*************997767899******9862267**************************************************** PP

  MOR2-PAG1_mid  569 svrewaedgeegagryraavvgnlpdsyqqfqyklsaklakdhpelsellceeimqrqldavdiiaqhqvltcmapwienlnflklkesg.... 658 
                      +  ++        + ++ +  + p  y + qy +s +la+d  e s  l  e + r ++  d   +  ++t++ pw++nl++           
     EPX74118.1 1236 RLNSFTLTA---MMEMKSFLESSNPALYLKPQYLFSVQLANDFSEDSFALTSECL-RYFNYGDF-HRRGLVTVLLPWLQNLELKMDVGNKvfef 1324
                     ***998776...666777788899*****************************98.67777775.677889**********8754333321111 PP

  MOR2-PAG1_mid  659 wserllkslyyvtwrhgdqfpdeieklwstva..skrrniipvldflitkgie 709 
                     ++   l  l  +t ++  ++p+eie lw+++a   +++n + +l fl+ +  +
     EPX74118.1 1325 YTVTTLIGLIEITTKYTKDLPNEIEALWTSLAlsGHKKNWTVILFFLMQQCFN 1377
                     5566788999*******************987435789999999999877654 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 0.41
  MOR2-PAG1_mid  947 ehlpllfhvtlvsmdssedivlkhcqdllvnllysla 983 
                     +++  +++ +++++d    iv k+c++++  ++  + 
     EPX74118.1 1476 NEVATILQAAFIQLDHYSKIVQKQCRQIIHYIVEKVQ 1512
                     4455666677777777777777777766544443333 PP

  == domain 4  score: 26.0 bits;  conditional E-value: 5e-10
  MOR2-PAG1_mid 1052 gdlrekwgaealkwamectsrhlacrshqiyralrpsvtsdtcvsllr 1099
                      dl + wg+ a++wa  c sr lac s q++r+l p   +d  + l+ 
     EPX74118.1 1567 PDLIQLWGKIAMNWATTCPSRRLACNSFQVFRCLLPNFDTDIQLNLIA 1614
                     59999********************************99998887765 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.13   4.5e+02       7      26 ..     671     689 ..     664     692 .. 0.82
   2 ?    7.1   0.1    0.0021       7.6       1      27 [.    1209    1235 ..    1209    1235 .. 0.93
   3 ?   -2.7   0.0       2.9     1e+04       6      28 ..    1837    1860 ..    1835    1862 .. 0.78

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.13
                 HHHT-SSHHHHHHHHHHHHH CS
        HEAT   7 kllsDpspeVReaAakaLga 26 
                 + ls+ps ++R+ A+  L +
  EPX74118.1 671 H-LSSPSVDIRQFAVALLND 689
                 3.8************99875 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0021
                  HHHHHHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT    1 llPlllkllsDpspeVReaAakaLgal 27  
                  llPl+l  ls ++ +VR  A+  Lg++
  EPX74118.1 1209 LLPLCLVKLSANNLSVRLKAFDLLGKF 1235
                  89**99999***************975 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 2.9
                  HHH.HT-SSHHHHHHHHHHHHHHH CS
        HEAT    6 lkl.lsDpspeVReaAakaLgala 28  
                  l++ ls + p +R+++++ L  ++
  EPX74118.1 1837 LSMfLSNSMPWIRKSTLRILDSIL 1860
                  66746889999*****99998776 PP

>> PI3Ka  Phosphoinositide 3-kinase family, accessory domain (PIK domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1      0.73   2.6e+03      84     120 ..     219     257 ..     142     290 .. 0.50
   2 ?   11.0   0.3   5.7e-05      0.21      62     110 ..     648     696 ..     608     701 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.73
                 TSTTS--HHHHH.HHHHHHHHSHHHHHHHH.HHHHHHHH CS
       PI3Ka  84 Ldskfkdesvre.yavkvLekasdeelllY.llQLVqal 120
                 L+ +  d +vre y +++L+ ++  ++ lY +  L +++
  EPX74118.1 219 LEKSNLDIKVREaYLIYILRAMKHLHIRLYpITHLEECV 257
                 444444444442244444444444444444333333444 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 5.7e-05
                 HHHHHHHHTTSHHTTHHHHTTTTSTTS--HHHHHHHHHHHHHSHHHHHH CS
       PI3Ka  62 vkealelldsWaeididdaLeLLdskfkdesvreyavkvLekasdeell 110
                  k+++  ++sW  i+  ++L +L  + ++  +r++av  L+++++ + +
  EPX74118.1 648 GKQDYDETQSWMIIEEIQSLAVLHLSSPSVDIRQFAVALLNDVKKLNTE 696
                 478999**********************************998766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2191 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       484  (0.0269954); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.00u 0.35s 00:00:01.35 Elapsed: 00:00:00.58
# Mc/sec: 11374.79
//
Query:       EPX74119.1  [L=157]
Description: ribosomal protein subunit L27 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      1e-31  108.8   2.3    1.3e-31  108.4   2.3    1.1  1  Ribosomal_L27  Ribosomal L27 protein


Domain annotation for each model (and alignments):
>> Ribosomal_L27  Ribosomal L27 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.4   2.3   7.2e-36   1.3e-31       2      78 ..      40     121 ..      39     122 .. 0.92

  Alignments for each domain:
  == domain 1  score: 108.4 bits;  conditional E-value: 7.2e-36
  Ribosomal_L27   2 hkkagGstkngrdskgkrlGvKkfggqlvkagnIivrQrgtkfhpGenvgiGkdhtlfAlvdGvVkfe..k...kkkrkyvs 78 
                     k++gGs++n+ ds+g+rlGvK++++q+v+ag+I+vrQrgtkfhpG+n ++G+d t+fA+v+G+Vkf   k   +++rkyv 
     EPX74119.1  40 AKHGGGSARNSGDSAGRRLGVKRSENQYVNAGEILVRQRGTKFHPGDNAKLGRDFTVFATVSGYVKFFqkKislRRTRKYVG 121
                    599****************************************************************965155678999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       361  (0.020135); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.31s 00:00:00.83 Elapsed: 00:00:00.51
# Mc/sec: 925.82
//
Query:       EPX74120.1  [L=1482]
Description: Lid2 complex subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.1e-74  248.6  12.1    2.5e-70  237.3   8.4    2.3  2  PLU-1        PLU-1-like protein
      6e-20   70.9  51.5    2.9e-10   39.9  10.4    4.0  4  PHD          PHD-finger
    2.1e-17   63.6   0.1    5.6e-17   62.2   0.1    1.8  1  JmjC         JmjC domain, hydroxylase
    3.3e-10   40.5   0.2    2.2e-09   37.8   0.1    2.6  2  ARID         ARID/BRIGHT DNA binding domain
    5.7e-07   29.8   3.1    5.7e-07   29.8   3.1    3.2  3  zf-C5HC2     C5HC2 zinc finger
    9.9e-05   22.1   2.3    9.9e-05   22.1   2.3    5.0  5  C1_1         Phorbol esters/diacylglycerol binding domain (C1
     0.0084   16.1   0.0      0.029   14.3   0.0    2.0  2  JmjN         jmjN domain
  ------ inclusion threshold ------
       0.23   11.7   2.4        1.8    8.8   0.2    3.1  3  Forkhead     Forkhead domain
        1.2    8.8  36.1      0.017   14.7   3.9    4.4  4  PHD_2        PHD-finger
        3.2    7.3  27.9       0.19   11.3   1.2    5.1  6  zf-PHD-like  PHD/FYVE-zinc-finger like domain


Domain annotation for each model (and alignments):
>> PLU-1  PLU-1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  237.3   8.4   1.4e-73   2.5e-70       1     338 [.     691    1029 ..     691    1030 .. 0.97
   2 !   12.7   0.1   2.9e-05     0.052      46     127 ..    1093    1181 ..    1089    1192 .. 0.85

  Alignments for each domain:
  == domain 1  score: 237.3 bits;  conditional E-value: 1.4e-73
       PLU-1    1 eWaekveelleeeekpsLkelrallneaekikfplkellekLktfvkdaekwvekaqqllskkqrtRrkne.......aeeeeeekeklsleelekL 90  
                  eW ek++++l  ++kp Lk+l+all +ae+   + k++ + L++f+++a++w+++++++ls    ++rk++       ++++ +++ +++l++l + 
  EPX74120.1  691 EWSEKLKSILLATPKPHLKSLEALLADAEYAMLNTKDT-TVLRSFIHKAKAWINSINHCLSISPIKKRKEKklsfmkmHDQRVNSTGMRDLKNLFQV 786 
                  6*************************************.***********************98888887789************************ PP

       PLU-1   91 leeldslpFdlpeieqLkelleeieefqkkarellseesedssieeleklieeGksfnvelpeleeLkkvleqlkWleevrevreekkqltleevke 187 
                  l+++++++F+++eie++k+++ ++ +f+ ++ ++ s +   ++ + +++l++e++s+++ +pel+ ++k+l q  Wl+++ ++++e  +++  ++++
  EPX74120.1  787 LQKSKDMSFTCEEIEAMKKKVSALLQFRVRLAKVFSGS---LDRRMCQNLLSEAESLGFMFPELTIIQKYLTQYDWLDMFYSIETE--KTSDADLEK 878 
                  ************************************94...67****************************************955..59******* PP

       PLU-1  188 LieeGeelaippekeellaelqelleaaekweekakelLeareklsleeLeallneaqeipvslpslaaleeilkkarewqrkveelikssq..daa 282 
                  Li  G   ++ pe+++++ ++++++  ae we+++++ L+ + ++s++ L+ l +ea  ++v++  +  + eil++a+e+++ +++l+++sq   ++
  EPX74120.1  879 LISFGLAAGV-PEDNDHMIFVRAMKGRAEIWENQVRDALS-KSNVSYDRLSLLKDEALTLCVDKVLYTRVVEILQNAEEVKSRINRLCERSQnkTFK 973 
                  *********8.888**************************.*************************************************9999666 PP

       PLU-1  283 erptlseleellkkgeslpvkleeleqLekelkraedWlekgkklFlkknaplslL 338 
                   rp+++e+++ l+++e+lp+ ++++  L+k+ +++ +W+++gk+lF+k+napl++L
  EPX74120.1  974 FRPVMDEVKDALAQAEKLPMLSDSVVALQKMYDSVLEWIRRGKRLFGKANAPLEIL 1029
                  69****************************************************98 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 2.9e-05
       PLU-1   46 vkdaekwvekaqqllskkqrtRrkne........aeeeeeekeklsleelekLleeldslpFdlpeieqLkelleeieefqkkarellse 127 
                  ++++ +w    +  +skk + R++++          e  + +++  le+l++Ll+ +  lpF  +e++ L+++++   +f+++++++  +
  EPX74120.1 1093 CEICHEWYHAKCLKMSKK-KLRQDEKftcpvcdyRVEIPRLSNRPRLEDLQSLLRDVVLLPFRPKETDTLENVVDLGTKFRQELQAFAHN 1181
                  678888888888888777.6677777889999997778889999****************************************988665 PP

>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.9  10.4   1.6e-13   2.9e-10       2      51 ..     257     303 ..     256     304 .. 0.94
   2 ?   -2.9   0.6       3.7   6.6e+03      16      50 ..     625     631 ..     617     634 .. 0.61
   3 !   30.2   9.4   1.7e-10     3e-07       1      50 [.    1079    1124 ..    1079    1126 .. 0.89
   4 !   19.0   8.7   5.4e-07   0.00097       2      51 ..    1326    1372 ..    1325    1373 .. 0.88

  Alignments for each domain:
  == domain 1  score: 39.9 bits;  conditional E-value: 1.6e-13
                 BTTTTSTTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSSTBSSTTTHT CS
         PHD   2 CavCkkksdeeeelvqCdgCkrwfHqkClkppleseekpegewlCekCke 51 
                 C++C + + ++e +++CdgC+ ++H +Cl+ppl+   +p+++w+C++Ck 
  EPX74120.1 257 CEFCAS-DSNPESILLCDGCECAYHISCLDPPLN--AVPKDDWYCDSCKH 303
                 ******.99*************************..888889******85 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 3.7
                 EEETTTSCEEETTTSSSTHSHHSHHSSTBSSTTTH CS
         PHD  16 vqCdgCkrwfHqkClkppleseekpegewlCekCk 50 
                 v+                            C+kC+
  EPX74120.1 625 VV----------------------------CSKCQ 631
                 44............................55554 PP

  == domain 3  score: 30.2 bits;  conditional E-value: 1.7e-10
                  SBTTTTSTTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSSTBSSTTTH CS
         PHD    1 rCavCkkksdeeeelvqCdgCkrwfHqkClkppleseekpegewlCekCk 50  
                  +C +C+    e++ ++ C+ C++w+H kClk+++++ +++ ++++C+ C+
  EPX74120.1 1079 FC-FCRL--PENGVMIECEICHEWYHAKCLKMSKKKLRQD-EKFTCPVCD 1124
                  68.9999..789*********************9966665.5*******8 PP

  == domain 4  score: 19.0 bits;  conditional E-value: 5.4e-07
                  BTTTTSTTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSSTBSSTTTHT CS
         PHD    2 CavCkkksdeeeelvqCdgCkrwfHqkClkppleseekpegewlCekCke 51  
                  Ca C+k   +e  + +C +C++ +H++C +   +++  +   ++C +Ck+
  EPX74120.1 1326 CAHCQK-PVNEASFTVCSRCNKEYHNECTGEIPNNSGYK--PFICHSCKR 1372
                  ******.999*******************9887755554..6******96 PP

>> JmjC  JmjC domain, hydroxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.2   0.1   3.1e-20   5.6e-17       2     114 .]     422     538 ..     421     538 .. 0.87

  Alignments for each domain:
  == domain 1  score: 62.2 bits;  conditional E-value: 3.1e-20
                 EEEE-TT-EEEEE--GGG-EEEEEEEEES-EEEEEE-GGGHHHHHHHHHHH.HHCCSTTG...CCTTTCEE-HHHHHHTT---EEEEE-TT-EEEE-TT CS
        JmjC   2 lylgmpksttpwhiedqglySinylhfgapkvWyiipeekkeklekvlskk.nskeqpdl...lrhkstlispkqlekegipvyrfvqkpgefVfvfpg 96 
                 +++gm  st  w++   g++ +  + +g++ +Wyi p+++ ek+ek+++   n+ ++  +     +    isp++l ++gi+v  +  +p+ef++v p+
  EPX74120.1 422 MSIGMAYSTYEWQQSPIGTSQVYHNRYGSTVTWYILPSNQTEKFEKFVNGLdNTYNDGVFltpSFQVPFPISPEVLLSNGIQVMAVDLRPNEFLIVAPK 520
                 789******************9999************************99532233333112334556799*************************** PP

                 -EEEEEESSSEEEEEEEE CS
        JmjC  97 ayHsvfnlgfniaeavnf 114
                 +yH +f lgf + e+++f
  EPX74120.1 521 SYHFGFHLGFGCLETTHF 538
                 ****************98 PP

>> ARID  ARID/BRIGHT DNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.8   0.1   1.3e-12   2.2e-09       4      90 .]     114     196 ..     112     196 .. 0.92
   2 ?   -2.8   0.0       5.9   1.1e+04      20      40 ..     989    1009 ..     977    1011 .. 0.71

  Alignments for each domain:
  == domain 1  score: 37.8 bits;  conditional E-value: 1.3e-12
                 HHHHHHHHHHHHTTS.SSS----SSSS-STTHHHHHHTTTSSHHHHTT.CHHHHHHHHHTS-..-.......HHHHHHHHHHHHHHHH CS
        ARID   4 eFlstLkqfhenrgt.lkkiPviggkevdlykLyraVikrGGfrkvtqknkWeevaqklglpredpeasesvaqalksiYeryLlpyE 90 
                 +++++Lk+fh +rg  ++k+P+++++++d+++L ++V+++   ++  +++  +++ + l+lp+     s+++ q l + Yery++pyE
  EPX74120.1 114 DYFKKLKEFHGERGLyFNKPPMLQNQPLDFLQLRNTVSRFSSLESTLSNSVLSKITESLNLPD-----SKDIRQILLRTYERYIKPYE 196
                 6899***********779********************9999999877889999999999984.....569****************9 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 5.9
                  SS----SSSS-STTHHHHHHT CS
        ARID   20 kkiPviggkevdlykLyraVi 40  
                  +k+P++    v l k+y  V 
  EPX74120.1  989 EKLPMLSDSVVALQKMYDSVL 1009
                  567888889999999998885 PP

>> zf-C5HC2  C5HC2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.2   1.1        10   1.8e+04       2      24 ..     273     283 ..     270     287 .. 0.51
   2 !   29.8   3.1   3.2e-10   5.7e-07       1      54 []     627     678 ..     627     678 .. 0.85
   3 ?   -5.6   4.2        10   1.8e+04       1      21 [.    1326    1346 ..    1326    1355 .. 0.48

  Alignments for each domain:
  == domain 1  score: -4.2 bits;  conditional E-value: 10
    zf-C5HC2   2 slCkaycYlSavvckkcpskvvC 24 
                 + C +  +            ++C
  EPX74120.1 273 DGCECAYH------------ISC 283
                 44444444............444 PP

  == domain 2  score: 29.8 bits;  conditional E-value: 3.2e-10
    zf-C5HC2   1 CslCkaycYlSavvckkcpskvvCleH...akelckecppknrvllyRytdeeLeal 54 
                 Cs+C++++++S+v+ + + ++++CleH    ++     + +  +++yR++ +eL++l
  EPX74120.1 627 CSKCQCMTFMSYVKTHVS-DETYCLEHfvgDSQ----LSSQPSTVYYRWDTTELSKL 678
                 ****************99.********643333....3457889**********975 PP

  == domain 3  score: -5.6 bits;  conditional E-value: 10
    zf-C5HC2    1 CslCkaycY.lSavvckkcpsk 21  
                  C++C+ +    S  vc++c +k
  EPX74120.1 1326 CAHCQKPVNeASFTVCSRC-NK 1346
                  5555544442244455555.32 PP

>> C1_1  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   2.8      0.01        18       5      43 ..     248     284 ..     247     286 .. 0.86
   2 ?   -1.0   0.1      0.92   1.7e+03      29      39 ..     296     306 ..     292     310 .. 0.76
   3 ?   -4.3   1.2        10   1.8e+04      30      36 ..     626     632 ..     622     634 .. 0.67
   4 !    9.0   4.5   0.00069       1.2      25      49 ..    1087    1111 ..    1079    1115 .. 0.81
   5 !   22.1   2.3   5.5e-08   9.9e-05      10      51 ..    1322    1361 ..    1317    1363 .. 0.91

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.01
                 EE--SS--B-TTT-SB--SSSS-EEEETTT--EE-CCCC CS
        C1_1   5 hrnfkqptfCkhCgeflwgkekqglkCswCkllvHkkCh 43 
                 +++f++   C+ C++        +l C+ C++ +H +C+
  EPX74120.1 248 RTFFERGEQCEFCASDS--NPESILLCDGCECAYHISCL 284
                 56678889999999999..888899*************7 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.92
                 EEETTT--EE- CS
        C1_1  29 lkCswCkllvH 39 
                 + C+ Ck  +H
  EPX74120.1 296 WYCDSCKHGIH 306
                 77888887777 PP

  == domain 3  score: -4.3 bits;  conditional E-value: 10
                 EETTT-- CS
        C1_1  30 kCswCkl 36 
                  Cs C++
  EPX74120.1 626 VCSKCQC 632
                 5777775 PP

  == domain 4  score: 9.0 bits;  conditional E-value: 0.00069
                  SS-EEEETTT--EE-CCCCTTS-SB CS
        C1_1   25 ekqglkCswCkllvHkkChekvpke 49  
                  + +++ C+ C++ +H kC++  +k+
  EPX74120.1 1087 NGVMIECEICHEWYHAKCLKMSKKK 1111
                  56799*************9987765 PP

  == domain 5  score: 22.1 bits;  conditional E-value: 5.5e-08
                  S--B-TTT-SB--SSSS-EEEETTT--EE-CCCCTTS-SBTT CS
        C1_1   10 qptfCkhCgeflwgkekqglkCswCkllvHkkChekvpkecg 51  
                  +++ C+hC++++   e     Cs C+  +H++C   +p+++g
  EPX74120.1 1322 NSNLCAHCQKPV--NEASFTVCSRCNKEYHNECTGEIPNNSG 1361
                  5789********..999999***************9999876 PP

>> JmjN  jmjN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   1.6e-05     0.029       1      34 []      45      78 ..      45      78 .. 0.97
   2 ?   -3.1   0.0       4.4   7.9e+03       3      14 ..     974     985 ..     974     986 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.6e-05
                -EE---HHHHC-HHHHHHHHHHHHCCCSEEEE-- CS
        JmjN  1 PvFyPTeeEFkdplkYiekieplgekyGIcKIvP 34
                P++ P+  +F+d++++++k e+   +y  +K+vP
  EPX74120.1 45 PTLQPSCTDFSDFYSFLRKNEQVLLEYPAAKVVP 78
                9*********************9999*9999999 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 4.4
                 E---HHHHC-HH CS
        JmjN   3 FyPTeeEFkdpl 14 
                 F+P ++E kd l
  EPX74120.1 974 FRPVMDEVKDAL 985
                 9******98865 PP

>> Forkhead  Forkhead domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1       6.2   1.1e+04       4      18 ..     564     579 ..     563     581 .. 0.70
   2 ?    8.8   0.2     0.001       1.8      41      78 ..     736     767 ..     724     795 .. 0.71
   3 ?    0.8   0.0      0.34     6e+02      44      60 ..     905     921 ..     894     939 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 6.2
                 ---HHHHH.HHHHHT- CS
    Forkhead   4 pysYaaLI.aqAikss 18 
                 p+sY aLI  +A+++ 
  EPX74120.1 564 PISYDALIiSMALSRL 579
                 7899888626788765 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.001
                 CC.-CCHHHHHHHHHHHHC--EEETT.-TTSS--EEE- CS
    Forkhead  41 taakkgWqnSirhnLslnkcFekvpreeeegkgslwti 78 
                 + + k+W nSi h+Ls + + ++ ++     k s+ ++
  EPX74120.1 736 H-KAKAWINSINHCLSISPIKKRKEK-----KLSFMKM 767
                 3.479************965444433.....3333333 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.34
                 -CCHHHHHHHHHHHHC- CS
    Forkhead  44 kkgWqnSirhnLslnkc 60 
                  + W+n +r +Ls +++
  EPX74120.1 905 AEIWENQVRDALSKSNV 921
                 578**********8764 PP

>> PHD_2  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   3.9   9.4e-06     0.017       3      36 .]     268     302 ..     266     302 .. 0.88
   2 ?   -1.2   1.8      0.85   1.5e+03       5      11 ..     625     631 ..     621     633 .. 0.78
   3 ?    2.3   3.9     0.071   1.3e+02       3      35 ..    1089    1123 ..    1087    1124 .. 0.87
   4 ?   10.0   3.4   0.00027      0.48       6      36 .]    1340    1371 ..    1337    1371 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 9.4e-06
       PHD_2   3 pllsCdkCsvaVHasCYGvskesdgee.WlCrrCe 36 
                  +l Cd+C+ a H sC   + + + ++ W+C+ C+
  EPX74120.1 268 SILLCDGCECAYHISCLDPPLNAVPKDdWYCDSCK 302
                 5899************998888887777******5 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.85
       PHD_2   5 lsCdkCs 11 
                 ++C+kC+
  EPX74120.1 625 VVCSKCQ 631
                 8899997 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.071
       PHD_2    3 pllsCdkCsvaVHasCYGvskesdgee..WlCrrC 35  
                  +++ C  C    Ha+C ++sk++  ++  ++C  C
  EPX74120.1 1089 VMIECEICHEWYHAKCLKMSKKKLRQDekFTCPVC 1123
                  7899****************998776668***998 PP

  == domain 4  score: 10.0 bits;  conditional E-value: 0.00027
       PHD_2    6 sCdkCsvaVHasCYGvskesdgee.WlCrrCe 36  
                  +C++C+   H +C G  ++++g + ++C  C+
  EPX74120.1 1340 VCSRCNKEYHNECTGEIPNNSGYKpFICHSCK 1371
                  8**************9999888667******5 PP

>> zf-PHD-like  PHD/FYVE-zinc-finger like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   1.2   0.00011      0.19       1      31 [.     257     285 ..     257     290 .. 0.89
   2 ?   -2.3   0.0       1.7     3e+03     122     142 ..     295     314 ..     287     332 .. 0.66
   3 ?    6.6   0.6    0.0031       5.5      11      34 ..    1086    1109 ..    1079    1119 .. 0.81
   4 ?   -0.7   0.3      0.54   9.6e+02      82     153 ..    1236    1304 ..    1231    1315 .. 0.63
   5 ?    5.8   1.8    0.0051       9.2       1      32 [.    1326    1355 ..    1324    1362 .. 0.88
   6 ?   -2.2   0.0       1.5   2.7e+03     118     133 ..    1360    1375 ..    1356    1401 .. 0.60

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00011
  zf-PHD-like   1 CdtCaeskdeekgqlvyCqGCslsyhkaClG 31 
                  C+ Ca+++  +  +++ C GC  +yh +Cl 
   EPX74120.1 257 CEFCASDS--NPESILLCDGCECAYHISCLD 285
                  99998877..88899**************96 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 1.7
  zf-PHD-like 122 lfRCaeCkrawhlehlpkksk 142
                   + C +Ck+++h    p+k +
   EPX74120.1 295 DWYCDSCKHGIHSYD-PRKGQ 314
                  578999999999643.44444 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.0031
  zf-PHD-like   11 ekgqlvyCqGCslsyhkaClGkRs 34  
                   e+g ++ C  C   yh +Cl + +
   EPX74120.1 1086 ENGVMIECEICHEWYHAKCLKMSK 1109
                   6899***************98655 PP

  == domain 4  score: -0.7 bits;  conditional E-value: 0.54
  zf-PHD-like   82 ckpfrekktakqeeklreendgvdPiteveeelinnaenvlfRCaeCkrawhlehlpkkskkseeedeeela 153 
                    ++ +++ t++q + +++ ++g  P   ++++  +n ++      +   a+     p++++k+ ++++ + +
   EPX74120.1 1236 KSTRKPRPTKRQRQIMKQVAEGLLPESAISPANAQNDKKATMN--NNGTAVSKADSPQSDTKT-SHENGQSN 1304
                   555678899999999999999****999999988887765432..223333333444444333.44444444 PP

  == domain 5  score: 5.8 bits;  conditional E-value: 0.0051
  zf-PHD-like    1 CdtCaeskdeekgqlvyCqGCslsyhkaClGk 32  
                   C+ C++    +++++ +C  C + yh++C G+
   EPX74120.1 1326 CAHCQKPV--NEASFTVCSRCNKEYHNECTGE 1355
                   77787766..999****************996 PP

  == domain 6  score: -2.2 bits;  conditional E-value: 1.5
  zf-PHD-like  118 aenvlfRCaeCkrawh 133 
                   +    f C +Ckra  
   EPX74120.1 1360 SGYKPFICHSCKRASE 1375
                   5555677888888754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1482 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       989  (0.055162); expected 358.6 (0.02)
Passed bias filter:                      516  (0.0287802); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                        22  (0.00122706); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 1.06u 0.34s 00:00:01.40 Elapsed: 00:00:00.55
# Mc/sec: 8062.34
//
Query:       EPX74121.1  [L=677]
Description: dymeclin 2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.5e-43  146.8  30.7    7.5e-43  146.8  30.7    1.8  2  Hid1      High-temperature-induced dauer-formation protein
    3.7e-17   62.0  25.1    1.3e-16   60.1  25.1    1.7  1  Dymeclin  Dyggve-Melchior-Clausen syndrome protein


Domain annotation for each model (and alignments):
>> Hid1  High-temperature-induced dauer-formation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  146.8  30.7   8.4e-47   7.5e-43       1     574 [.       1     543 [.       1     568 [. 0.86
   2 ?    0.1   0.1     0.018   1.6e+02     773     812 .]     616     654 ..     603     654 .. 0.83

  Alignments for each domain:
  == domain 1  score: 146.8 bits;  conditional E-value: 8.4e-47
        Hid1   1 MgasesklafkkaifrLgekrliaeddayweefWelpesteDvFeLltpadirkv.RdenleNletLilavierlvelakhpsfpdpeqapeseaLnCv 98 
                 Mg +esk+ f+++++ L +k  ++e   y++ f  +  + +DvF+L+ p++i++  + e+++ l +L+++ +  +++ +k+ +  +  + ++s++Ln v
  EPX74121.1   1 MGVAESKISFRNSLLTLLKKPAKPE--EYQHIFN-SLINDSDVFSLIFPKEIQQFcQGEEFSQLTLLVQICLWNIIYYEKNAKKRNYIETKKSSVLNSV 96 
                 9****************77766655..7988885.566789************9637899**********999******99999998999999****** PP

        Hid1  99 RlLtrllPfifEeesleewedklfWssrkkpkrkaqvasevledessseeeeeeekekplaeelldalvdlLFlkdFTvpapksskskveysiWesGvg 197
                  +Ltrl+P ++E+++ ++w  +++ ss  +  r +q++     d ss   + e  +e+ l  +ll+++++ +Fl+++ ++ +    s++   iW sG +
  EPX74121.1  97 QILTRLIPHLYESKKSNSWIRAYLFSSPTDAFRSMQSQ----LDISSFYPDFELPTETCLLSTLLNSVLQICFLPGLCLSIM----SSDGEKIWSSGLV 187
                 *********************9**9*999988876622....233333347899**************************99....3333348****** PP

        Hid1 198 tatklps.nkeiesnRtEvLklLLtlfsetlYrspsevssngskvltylvssdnrqevltLlcSLlntvcrydpsgsglpynsvvlkdsrellVeyclq 295
                 +++  +     +++++  +L+ L++l+se+lY+s  ++     +vl +l +++nr+  + L+cSL+n++  +  s+s lp    vl++s ++l  y++ 
  EPX74121.1 188 FQKLEHPpSYDHQHHQLTLLRFLMVLISEPLYQSQGQM---DASVLEHLLAINNRKTNIRLICSLINIA--FINSSSWLPS---VLSQSSNVLRRYSAL 278
                 *997777799999*********************7655...899***********************86..6677788887...6666779999***** PP

        Hid1 296 lLlvlldypipedeklseevktertsskpkNlfriylgrlhreqdfqFlldgltriLnqplq..ssylpnsqksvkfaqelliLlwellqcNkrFrsfv 392
                 +Ll l++ p p+  ++              N +  +l++lhr +d+q+l+  l + ++ pl+  ss +   q+ ++   e+li++  ll+   rF + +
  EPX74121.1 279 FLLQLISIPKPKTVST--------------NTVLDILRKLHRSEDLQLLAASLFKTISLPLKhsSSLISLFQNTSQNLEEALIFFFILLTNHFRFANEL 363
                 *******997776665..............99******************************988889999999999********************** PP

        Hid1 393 iessrvldllvlilyylveyrs.dqskkglv.kicvfillllSseknfgkrLnkpfeaqeslp.tsiripvftgtyaDfliisihkllttgkeklsslv 488
                  +   + +l+  +ly  ++y s + +++g + +i  + l+ + s k+ +++  k     + lp +s ++p  +     ++++ +   ++ g+++++   
  EPX74121.1 364 EKLPFLNELISSLLYIFINYDSsEDANIGFIsQIAGYSLQQILSKKELVESFAKCNA-SSMLPlSSQKLPIYELNITNYILLTLAIHINNGRHSQHLAG 461
                 ***************99988761457788775899************8887666555.599**656788888888888888877766788877776666 PP

        Hid1 489 dtLleiLvnispylktLsleacskllqLlesfSspsfLlanesNhkllalllealnnviqkqfkgnrnLvYsilrkrkvfealrnl 574
                  +L  +L ni     +L l    +l+ L++++ +p+ Ll ++sN+ ll+ ll  l   i k+ ++n  L+ ++  + ++f  l + 
  EPX74121.1 462 LILSNVLLNI----SNLPLMVLEHLVTLISHYLEPNVLLTKKSNAILLKQLLSGLIMTISKNLDENYLLINFLKENSNRFGPLLQC 543
                 6666666665....68999999*********************************************9999988899999777665 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.018
        Hid1 773 lslgWyesllwgviynreenvkkltavgvwndtevkLfki 812
                   + W    lw +i  + +  +++ a+  w++t v Lf+i
  EPX74121.1 616 NIQDWIYFNLWRIILRQCS-SNAPVALSPWSGTAVTLFEI 654
                 5578999999999987766.567899************98 PP

>> Dymeclin  Dyggve-Melchior-Clausen syndrome protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.1  25.1   1.5e-20   1.3e-16       1     383 [.       1     395 [.       1     566 [. 0.74

  Alignments for each domain:
  == domain 1  score: 60.1 bits;  conditional E-value: 1.5e-20
    Dymeclin   1 MGassSklafrkavlqllsktqpidaddafWdqllsfslktptsvqdvfalvepaaeilalrnespgnLatLlrkaveklvelkescssakeqqt.... 95 
                 MG ++Sk +fr+++l+ll+k+ + ++ + ++++l +        ++dvf l+ p +   + + e+ ++L  L++ +++ +   ++  +++k   +    
  EPX74121.1   1 MGVAESKISFRNSLLTLLKKPAKPEEYQHIFNSLIN--------DSDVFSLIFPKEIQQFCQGEEFSQLTLLVQICLWNIIYYEK--NAKKR--Nyiet 87 
                 9********************887767777777775........889****66666667888999*************8888888..33322..11233 PP

    Dymeclin  96 alsqalNalrllrrilkyllerasee............................eedeeeseeaep.laeslllalvdllfcpdftvps.k........ 156
                   s++lN++ +l+r++++l e+++++                                  +  +e  l+++ll+++++++f+p++ ++           
  EPX74121.1  88 KKSSVLNSVQILTRLIPHLYESKKSNswiraylfssptdafrsmqsqldissfyP---DFELPTETcLLSTLLNSVLQICFLPGLCLSImSsdgekiws 183
                 5578***************999998899999999999999999999999986541...4566677779999*************9999862567889** PP

    Dymeclin 157 ............sdstyalrtellklLlvllseqlysppssadssafnklldgktsaenrialplvtsLLntviaydpvdesdagsgvpynhllfsdaa 243
                             s  + +++++ll++L+vl+se+ly+++ ++d s+ ++ll +  ++ n     l++sL+n+   +++       + +   ++l s+++
  EPX74121.1 184 sglvfqklehppSYDHQHHQLTLLRFLMVLISEPLYQSQGQMDASVLEHLLAINNRKTNI---RLICSLINIAFINSSS------WLP---SVL-SQSS 269
                 ***********966799999*************************99****997766666...********99988776......555...223.5677 PP

    Dymeclin 244 asleplveqslqlLlvlldhdktekavaeesestaeesNlfrnyLsrihreeesdadfkfilkglfrllnntvpseqtylpns...kiqfhqellllly 339
                    + l + s+++Ll l++ +k++  ++          N   ++L+++hr+e    d+++   +lf++++  ++ +++ +        q+ +e l++++
  EPX74121.1 270 ---NVLRRYSALFLLQLISIPKPKTVST----------NTVLDILRKLHRSE----DLQLLAASLFKTISLPLKHSSSLIS-LfqnTSQNLEEALIFFF 350
                 ...89***************99999877..........**************....***************7777777444.3588899999******* PP

    Dymeclin 340 kLlhsNkkfleyvlkrsdvldllvPiLellydaradq.srvgliy 383
                  Ll    +f + + k   +++l++ +L++  +  +++ +++g i 
  EPX74121.1 351 ILLTNHFRFANELEKLPFLNELISSLLYIFINYDSSEdANIGFIS 395
                 ****************************98777666657767653 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (677 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       723  (0.0403257); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.31s 00:00:00.99 Elapsed: 00:00:00.47
# Mc/sec: 4303.73
//
Query:       EPX74122.1  [L=397]
Description: inner membrane translocase Oxa102 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      2e-24   86.3   4.3    5.4e-24   85.0   3.4    1.9  2  60KD_IMP         60Kd inner membrane protein
  ------ inclusion threshold ------
      0.049   13.6   0.1        3.1    7.8   0.0    2.4  2  2H-phosphodiest  Domain of unknown function (DUF1868)


Domain annotation for each model (and alignments):
>> 60KD_IMP  60Kd inner membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0     0.091   8.1e+02      73      92 ..      17      46 ..      13     109 .. 0.61
   2 !   85.0   3.4     6e-28   5.4e-24       1     165 [.     116     311 ..     116     312 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.091
    60KD_IMP 73 lLiqlpifialyrvlrsla..........s 92
                + +q p++ial  + r+            s
  EPX74122.1 17 MSVQSPVVIALNGFQRRHFrllqkknhsdS 46
                558999999999988883344444333330 PP

  == domain 2  score: 85.0 bits;  conditional E-value: 6e-28
    60KD_IMP   1 yglaIilltiivrlillpltlkqlkssakmqelqPelk....eiqekyk.kdk...qklqqemmklYkkegvnplaGclplLiqlpifialyrvlrsla 91 
                 ++ +I    i +rl +lpl++k +++s k++ ++P++     ++q+  + ++     ++ + +++lY+ ++vnpl+ +   ++q ++fi+++++l+ +a
  EPX74122.1 116 WWASIAATAIGMRLTMLPLMIKMMRTSSKLAVINPQVSqhmvALQKAKAeNNStgmSEATTRIQELYRSNNVNPLSLLTAPVVQGIVFISFFYALKCMA 214
                 778999999**************************96522226777554333334355778899*********************************99 PP

    60KD_IMP  92 ..........sf.wikdLsapd....lpillavttflqqkls.....ksk.km...qkmmlyvmplmilffslsfpaglvlYwlvsnllsiaqqliin 165
                            f w++dL++ d    +pil +++++++ +       + k +m   +k +  ++ +   +f++sfp+++ +Yw+ sn++s++q l+++
  EPX74122.1 215 gvpvegflegGFlWVQDLTKADpyavFPILNGLLMLFNIEAGsetgtN-KaAMapgMKRFFRLLCAASPVFTMSFPMAIFMYWVPSNVFSVFQGLLLK 311
                 88888666653379******9999************995555222221.13223455666688999999************************99876 PP

>> 2H-phosphodiest  Domain of unknown function (DUF1868)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0    0.0091        81      37      67 ..     136     167 ..     122     174 .. 0.79
   2 ?    7.8   0.0   0.00035       3.1      34      87 ..     318     371 ..     304     381 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.0091
                      HHTSGGGGGEEE-.-GGG-EEEEEEEEETT-- CS
  2H-phosphodiest  37 lqaspeadklall.PpsSlHmTvfegvieerr 67 
                      ++ ++ ++kla++ P+ S Hm  ++ ++ e+ 
       EPX74122.1 136 IKMMRTSSKLAVInPQVSQHMVALQKAKAENN 167
                      6678888898875499******9998877765 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.00035
                      HHHHHTSGGGGGEEE--GGG-EEEEEEEEETT--STTSS-TTS-TT--HHHHHH CS
  2H-phosphodiest  34 reklqaspeadklallPpsSlHmTvfegvieerrktdlWpadLpldaplqkita 87 
                      +  l++ p adkla  P++   +  f g+i+  r+++++p+  +  +p +k+++
       EPX74122.1 318 KLDLPEVPAADKLAAPPQNESFLRSFTGIINGVREQKKYPEASDILKPFHKVND 371
                      45678899********************************99888888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (397 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       605  (0.0337442); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 2756.82
//
Query:       EPX74123.1  [L=541]
Description: calcium-dependent serine/threonine protein phosphatase calcineurin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      3e-37  129.1   0.2    4.8e-37  128.5   0.2    1.3  1  Metallophos  Calcineurin-like phosphoesterase
  ------ inclusion threshold ------
      0.037   13.4   0.0      0.056   12.8   0.0    1.2  1  DUF5378      Family of unknown function (DUF5378)


Domain annotation for each model (and alignments):
>> Metallophos  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.5   0.2   5.3e-41   4.8e-37       2     203 ..     113     313 ..     112     314 .. 0.91

  Alignments for each domain:
  == domain 1  score: 128.5 bits;  conditional E-value: 5.3e-41
                  EEEEEESBTBTTCCTHHHHHHHHHHHH.HHHTTESEEEEESTSSSSSHHHHHHHHH.HHHHHHHTSEEEEEC-TTS........CHHHHHHHHHHHHH CS
  Metallophos   2 rilvigDlHlalgggqlddllkllddl.lreekpdlvllaGDlvdrgdlekellel.laalvkypipvylllGNHe........gfeeellnkygylg 89 
                  +i+v+gD+H     gq++dl+kl++   ++e+  +l+l  GD+vdrg ++ e+l + ++ ++ yp+ ++ll+GNHe        +f+ e+ +ky    
   EPX74123.1 113 PITVCGDIH-----GQYYDLMKLFEVGgNPENTQYLFL--GDYVDRGYYSIECLLFlYSLKIWYPNSFWLLRGNHEcahltdyfTFKLECTHKYN--- 200
                  79*******.....**********88855556778888..*******88888888889******************9988888877778888877... PP

                  HHHHHHEHHHCEEETSEEEEEETTEEEEEEEESE.CEEETHHHHHHHHHHHSCHHHHCC...HHHHHH.HHHHTTCSEEEEEESSESSCSSSCSCCHH CS
  Metallophos  90 ifsepwrsdaevfnnlplaslgsgslkvlllhGg.spellvsldklgslnleleapepg...dewlkd.lekrekadwvivlgHsplyrgsgylfgde 182
                     ++++ + e fn+lpla+++++  ++l++hGg spel ++l++++ +n++ e+p++g   d++++d le+++         H ++  g++y ++++
   EPX74123.1 201 --VNIYQACLESFNALPLAAIMNK--QFLCVHGGlSPEL-HTLNDIRMINRFCEPPTHGlmcDLLWSDpLEEFGSETSSKHYIHNNVR-GCSYFYSYP 292
                  ..99********************..********88888.****************************88888888888888899998.********* PP

                  HHHHHHHHTTESEEEEESSSS CS
  Metallophos 183 aledllkkygvdlvisGHtHv 203
                  a++ +l+++++  vi++H+ +
   EPX74123.1 293 AVCSFLENNNLLSVIRAHEAQ 313
                  ******************976 PP

>> DUF5378  Family of unknown function (DUF5378)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   6.3e-06     0.056      88     163 ..      93     167 ..      89     182 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 6.3e-06
     DUF5378  88 vllpiflivdkkkkiakalaplailgalitliGelivvsdeedeinellkylFiGdkenqlyFllHflllllalvl 163
                 ++   + i+  + +++++ ap++++g +   + +l+ + +   +  e  +ylF Gd+ ++ y+++  ll+l++l +
  EPX74123.1  93 IIKHATEILRSEENLIEVDAPITVCGDIHGQYYDLMKLFEVGGNP-ENTQYLFLGDYVDRGYYSIECLLFLYSLKI 167
                 556667788899999999999999998887776665444433333.455***********************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (541 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       323  (0.0180155); expected 358.6 (0.02)
Passed bias filter:                      264  (0.0147247); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.23s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 3881.21
//
Query:       EPX74124.1  [L=381]
Description: S-adenosylmethionine decarboxylase proenzyme Spe2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   8.8e-120  399.9   0.1     1e-119  399.7   0.1    1.0  1  SAM_decarbox  Adenosylmethionine decarboxylase


Domain annotation for each model (and alignments):
>> SAM_decarbox  Adenosylmethionine decarboxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  399.7   0.1  5.7e-124    1e-119       3     354 ..      19     378 ..      17     379 .. 0.91

  Alignments for each domain:
  == domain 1  score: 399.7 bits;  conditional E-value: 5.7e-124
                   ---SSEEEEEEEEEE-TT.S-TT.....GGGGS-HHHHHHHHHHTT-EEEEEEE-SSEEEEEEE-XXEEEESSEEEEEEETTSXGGGGHHHHHHHHH CS
  SAM_decarbox   3 aFEGpEKlLeiwfaesee.elekskkeegLrsisrekweeiLdlvkCkilsvvsseevdaYlLSeSSlFvfphkliLkTCGtttlLlclekllelae 98 
                   +FEGpEKlLe+wf++  + ++e+ +++ gL+s+ re w+++L+ ++Ck+lsvvss+evdaYlLSeSS+Fvfphk+iLkTCGtttlL++l++lle+a 
    EPX74124.1  19 SFEGPEKLLELWFSAPLNsDIENGNTKVGLKSVGRELWDDMLSRAQCKVLSVVSSNEVDAYLLSESSMFVFPHKIILKTCGTTTLLASLPRLLEIA- 114
                   7************987551566666666********************************************************************. PP

                   HTTE..EEEEEEEEEESSSSGGGXXGGGCSHHHHHHHHHHHXTTXEEEEESETTSSEEEEEEE.............ESSXXX.XXXEEEEEEEESXX CS
  SAM_decarbox  99 eelgaaevekvfYsrksFlfpekQksphrsfkeEvklLdklfengkayvvgkmnsdhwylYvaeeekeeeeeeakkeeeeseeeedetleilMteLd 195
                   +++g+a++ + fYsrk+Fl+pe+Q +ph+s+++Ev++L+ +f++g++yvvg +n++hwyl++   ++++  e       +s + edetle+lMt+++
    EPX74124.1 115 SSIGFAHPLRTFYSRKNFLYPERQLAPHTSWEDEVRYLQGFFPQGSSYVVGPTNKNHWYLFSDVADESDLFE-------SSLDPEDETLEVLMTNMS 204
                   8999**********************************************************9776666554.......45669************* PP

                   HHHHGGGBXSSXE...........................HHHHHHHHHSHHHHSX....TSEEEEEEXSSBXEEEEEEETT.EEEEEEEEXXSTTX CS
  SAM_decarbox 196 pekakkFvkerks....kee..............edeghalgkevteksgldkilp....eaeidafaFepcGYSaNaiveeeayyTiHvTPeegfS 270
                   pe++ +F+  +      + +               ++gh lg+ v+e sg++++++    +a +d f+Fep+G+S+N+i ++ +y+TiHvTP++++S
    EPX74124.1 205 PERSLQFYAPSLDvvhqS-KgedymkpentdqpvLSTGHILGAYVAELSGVKDLCStedgKAVLDGFQFEPIGFSSNMIYKD-RYATIHVTPQDHCS 299
                   ********5554466550.14556666677788899********************9**9*********************9.************** PP

                   EEEEEEXXXX....SXXHHHHHHHHHHHXXSEEEEEEEEXTTS........HHHHHTTXXXSTEEEEEEEEEEEETEEEEEEEE CS
  SAM_decarbox 271 YaSFEtnvplkeeskslkelikkvlkiFkPgkfsvtlfaekeseeeekvlkeleasklkklkgykrkdrivyelegyklvylsf 354
                   YaSFEtnv+ ++ ++s+ ++i+k +++F  g+f++tlf++k s++e++  ++l     k++++ykr++ ivy+++gy+lv++sf
    EPX74124.1 300 YASFETNVSKSQFGRSTVKTIEKAVNTFGAGNFCLTLFQAKGSAHEKQLYEKL-----KHFESYKREEFIVYDFPGYELVFASF 378
                   *******************************************8888876554.....5779*********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (381 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       386  (0.0215294); expected 358.6 (0.02)
Passed bias filter:                      347  (0.0193541); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.53
# Mc/sec: 2152.46
//
Query:       EPX74125.1  [L=1173]
Description: condensin complex subunit Cut14 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      2e-71  239.9   0.0    3.9e-71  239.0   0.0    1.5  1  SMC_N         RecF/RecN/SMC N terminal domain
    7.7e-18   64.9   0.1    2.3e-17   63.4   0.1    1.9  1  SMC_hinge     SMC proteins Flexible Hinge Domain
    9.9e-13   48.5   2.3    9.9e-13   48.5   2.3    3.9  2  AAA_15        AAA ATPase domain
    3.4e-06   27.7  33.9    3.4e-06   27.7  33.9    6.8  4  AAA_23        AAA domain
    6.4e-06   26.2  32.0    8.9e-05   22.4   0.7    4.9  4  AAA_21        AAA domain, putative AbiEii toxin, Type IV TA s
    6.6e-05   22.6   0.0    0.00016   21.4   0.0    1.6  1  AAA_29        P-loop containing region of AAA domain
  ------ inclusion threshold ------
      0.054   13.6   6.9      0.055   13.5   0.8    3.3  2  DUF2559       Protein of unknown function (DUF2559)
       0.51   10.2   5.2       0.33   10.8   0.7    3.1  2  DUF503        Protein of unknown function (DUF503)
        1.2    7.6  17.7       0.01   14.4   5.0    2.9  3  FUSC          Fusaric acid resistance protein family
        6.8    6.7  65.5       0.21   11.6   5.1    9.4  9  DUF1664       Protein of unknown function (DUF1664)
        7.6    6.8  23.2       0.99    9.7   1.0    6.5  5  HALZ          Homeobox associated leucine zipper


Domain annotation for each model (and alignments):
>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  239.0   0.0   2.4e-74   3.9e-71       2     215 ..       3    1165 ..       2    1169 .. 1.00

  Alignments for each domain:
  == domain 1  score: 239.0 bits;  conditional E-value: 2.4e-74
                  EEEEEEESETTEECEEEEEETTSSEEEEEESTTSSHHHHHHHHHHHCTT.TTTTTTCHCCCCCC--BTTCSSTTEEEEEEEEEETTEE....SSSSS CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxx RF
       SMC_N    2 lkrleienFksyagktvilpfsksftaivGpNGSGKsnlldAilFvLGersakklrseklsdlihkskekasvkkaeveitfdnedkk....lkiek 94  
                  +++l+i++Fksya +tvi +++++f+ai+G NGSGKsn+ldAi+FvLG ++++++r+++l+dli+k + +a ++ka+v+i+f+n +++      +++
  EPX74125.1    3 IEELIIDGFKSYAVRTVISNWDDQFNAITGLNGSGKSNILDAICFVLGLTNMSTVRAQNLQDLIYK-RGQAGITKASVTIVFNNRNASacpiGFEDH 98  
                  899**************************************************************9.9******************99988888999 PP

                  SCEEEEEEEETTSEEEEEETTEEE-HHHHHHHHHCTT-STT........................................................ CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........................................................ RF
       SMC_N   95 eevsisrrvkrkgeseykingkevtkkevsellesagiske........................................................ 135 
                  ++vs++r+v+ +g+s+y ing+++ +++v++l++s++++++                                                        
  EPX74125.1   99 PQVSVTRQVIMGGTSKYLINGHRALQQNVQNLFQSVQLNINnpnflimqgritkvlnmksteilsmieeasgtrmfeerkekafrtmqrkeakveei 195 
                  9************************************************************************************************ PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX74125.1  196 ntllreeieprlaklrsekktfleyqqvyndierlsqicvafdyhnlsiklehlekqvfqkqngiaetessiakskeeikvlekhikdlekicstqm 292 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX74125.1  293 sasseyasldnqlqaatekitrlstsieikqssmqeeiknlkslkekraaadslrdkkeknfeksrllyeqknreyqqtltavksqeelisslstgl 389 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX74125.1  390 sssegheigyskklheardelnqlnaekeiermklknlskriseleprrteankrqqqiekqvaqlqqdvtkiesrlesgvqdstkekilrqnvdql 486 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX74125.1  487 rkereqlsdevdtlhsrlayldfrytdpvpkfdrskvkgliaqlfnlskenydkqtaleitaggrlynvvvenervgaqllqngnlkkrvtmiplnk 583 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX74125.1  584 issfvasservgaakhisnnraslaleligyedellpamqyvfgaslicddpdvakkvtfhpsvrlksvttdgdvydpsgiltggsvnktagpllql 680 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX74125.1  681 qklrevseklkkieneystlkhelgqviagnaqfhrleqelqlkrhelslmeeqkvndplcrllieyhnckeelsvlrqrmpnlderirenetsikk 777 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX74125.1  778 ierdmfewknnkgskmtelhseltklkekllsstkdveevenelnsakldresftseilrfndnassfetsishlkeelselelnlndeqrrrkslt 874 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX74125.1  875 ekleqetrrysginnelnnlktklkvidssvndqqllsqklkhehdrlereknvaevalrqldkehswiqdrkqtfgqeatmfdfraqnirqckeql 971 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX74125.1  972 aslkpkfasmrktinpkvmdmidgvekreaklkamirtihrdkrkiqetvysidkfkkqalektwievnaafgeifdellpgnsaelqppegkefts 1068
                  ************************************************************************************************* PP

                  .................CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC-SCEEEEEEEE CS
                  .................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  136 .................lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemlekadklvgvtkve 215 
                                   +LSgG+++LvalaL++++ k+kpap+y+lDeidaaLD ++++++ +l+k+k k +Qfi++sl+e+m+++a++l+ v++ +
  EPX74125.1 1069 gleirvrigsiwkdslaELSGGQRSLVALALIMSLLKYKPAPMYILDEIDAALDLSHTQNIGRLIKTKFKGSQFIIVSLKEGMFTNANRLFHVRFMD 1165
                  ********************************************************************************************99854 PP

>> SMC_hinge  SMC proteins Flexible Hinge Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.4   0.1   1.4e-20   2.3e-17       2     116 ..     521     641 ..     520     642 .. 0.90

  Alignments for each domain:
  == domain 1  score: 63.4 bits;  conditional E-value: 1.4e-20
   SMC_hinge   2 kgvlGrladlievd.egye..kAveaalgnrlqalvvedeetakkiieflkkknagratflpldrikqknkadgandkns.....gavplidlvevdde 92 
                 ++v G +a+l+++  e y+  +A+e+ +g+rl ++vve+e +  ++++    k  +r+t++pl++i+++  +++     +     +a  +++l+ ++de
  EPX74125.1 521 SKVKGLIAQLFNLSkENYDkqTALEITAGGRLYNVVVENERVGAQLLQNGNLK--KRVTMIPLNKISSFVASSERVGAAKhisnnRASLALELIGYEDE 617
                 5689**********999*9999*************************665555..67********99887777766655578889************** PP

   SMC_hinge  93 lrkalryllgdtlvvdsldeAeel 116
                 l +a++y++g  l++d+ d+A+++
  EPX74125.1 618 LLPAMQYVFGASLICDDPDVAKKV 641
                 *********************997 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.5   2.3   6.1e-16   9.9e-13       1     283 [.       1     368 [.       1     389 [. 0.62
   2 ?    0.0  18.7      0.33   5.4e+02      96     285 ..     349     547 ..     337     587 .. 0.70

  Alignments for each domain:
  == domain 1  score: 48.5 bits;  conditional E-value: 6.1e-16
      AAA_15   1 MkIkkikikNFRslkd..veidlseeltvliGkNnsGKSsilealdlFlnnkekkn...............kkvikiekedleifeniseskdikIdve 82 
                 MkI++++i  F+s+    v  + +++++ + G N+sGKS+il+a+ + l  +   n                               ++   +  +++ 
  EPX74125.1   1 MKIEELIIDGFKSYAVrtVISNWDDQFNAITGLNGSGKSNILDAICFVLGLT---NmstvraqnlqdliykR--------------GQAGITKASVTIV 82 
                 **************965233356666*******************9999988...33245555555555551..............4444444444444 PP

      AAA_15  83 f.........................................................................................aekekakey 92 
                 f                                                                                         +++e +++ 
  EPX74125.1  83 FnnrnasacpigfedhpqvsvtrqvimggtskylinghralqqnvqnlfqsvqlninnpnflimqgritkvlnmksteilsmieeasgtrMFEERKEKA 181
                 4555555555555557777777777777777777777777777777777777777777888888888888889999***99999888888333444444 PP

      AAA_15  93 ektlkskekkka...dlllkkkesdlkktikdkklklkknelsdekisvekkkskkelpkekeeklekekeelkid.kedlkklikkleeslkkeeelk 187
                 ++t+++ke+k +   +ll +++e +l k+  +kk+ l+     ++ ++++ +  +++   + +++l  + e+l+++ +++++ + +  e+s+ k++e  
  EPX74125.1 182 FRTMQRKEAKVEeinTLLREEIEPRLAKLRSEKKTFLE-----YQQVYNDIERLSQICVAFDYHNLSIKLEHLEKQvFQKQNGIAE-TESSIAKSKEEI 274
                 55555555544400044555555666666666666654.....6666666666677888888888888888898885555555555.555555555577 PP

      AAA_15 188 nvlksaiiklllisakRnvsdedsekkssllgklkekileealqekleeelteklkeiqeklkeidkklaeelk........kilkkkidkikkfnykg 278
                 +vl+++i++l+ i + + + ++++ + ++ l +++eki +       + +++ k +++qe++k++++  +++++        ++ ++k      + y +
  EPX74125.1 275 KVLEKHIKDLEKICSTQMSASSEYASLDNQLQAATEKITRL------STSIEIKQSSMQEEIKNLKSLKEKRAAadslrdkkEKNFEK----SRLLYEQ 363
                 88888888877777777777777777777788888888774......55555566666666666665555555555554333222222....2333333 PP

      AAA_15 279 kknee 283
                 k+ e+
  EPX74125.1 364 KNREY 368
                 33333 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.33
      AAA_15  96 lkskekkkadlllkkkesdlkktikdkklklkknelsdekisvekkks...................kkelpkekeeklekekeelkidkedlkklikk 175
                 +k+k+ +k+ ll+++k+++ ++t++  k +                 +                   + +   e +++l++ ++e +i+  +lk+l+k+
  EPX74125.1 349 KKEKNFEKSRLLYEQKNREYQQTLTAVKSQ-----------------EelisslstglsssegheigYSKKLHEARDELNQLNAEKEIERMKLKNLSKR 430
                 444444455555555555555544444444.................44455555555555556688777777889999999999999999*******9 PP

      AAA_15 176 leeslkkeeelknvlksaiiklllisakRnvsdedsekkssllgklkekileealqekl...eeelteklkeiqeklkeidkklaeelk.......kil 264
                 ++e  +     + +  +++i+ ++ + +++v++ +s  +s + +++kekil++++ ++l   +e+l ++ + +++ l  +d+ +++          k l
  EPX74125.1 431 ISELEPRRT--EANKRQQQIEKQVAQLQQDVTKIESRLESGVQDSTKEKILRQNV-DQLrkeREQLSDEVDTLHSRLAYLDFRYTDPVPkfdrskvKGL 526
                 999998888..99999999999***********9999999999999999999865.4454555566666666666666666666443337888777777 PP

      AAA_15 265 kkkidkikkfnykgkkneeie 285
                 +  ++++ k+ny +++  ei+
  EPX74125.1 527 IAQLFNLSKENYDKQTALEIT 547
                 777777777787777766655 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7  33.9   2.1e-09   3.4e-06       2     154 ..       6     245 ..       5     384 .. 0.63
   2 ?    0.7  22.1      0.38   6.2e+02      82     200 .]     349     467 ..     344     467 .. 0.77
   3 ?   -2.6   0.2       3.9   6.3e+03     154     168 ..     482     496 ..     469     548 .. 0.52
   4 ?    2.0  12.0      0.16   2.5e+02      87     197 ..     683     812 ..     633     815 .. 0.73

  Alignments for each domain:
  == domain 1  score: 27.7 bits;  conditional E-value: 2.1e-09
      AAA_23   2 Lkienfrsf.rdqei.dFskgltlItGpNGaGKTTildAiklaLygetprlsrksgrgfeksdveiesegkvkayveltfenkdgry.......trsie 91 
                 L i +f+s+  ++ i + ++ +++ItG NG+GK+ ildAi+++L+    ++s+ + +++ +  ++ ++ g +ka+v++ f+n +          + +++
  EPX74125.1   6 LIIDGFKSYaVRTVIsNWDDQFNAITGLNGSGKSNILDAICFVLGLT--NMSTVRAQNLQDLIYKRGQAGITKASVTIVFNNRNASAcpigfedHPQVS 102
                 89*******646667567**************************994..67777788999999999999999999*****8888776977777766666 PP

      AAA_23  92 rerelskkkgkttkkaklelleideleqfisellgskki..ilnlilflgqer.............................feefelkdkke...... 153
                  +r+++ + ++++  +     ++++l+q++++l++s +   +++++l + q+r                             +         +      
  EPX74125.1 103 VTRQVIMGGTSKYLIN-----GHRALQQNVQNLFQSVQLniNNPNFL-IMQGRitkvlnmksteilsmieeasgtrmfeerkE---------Kafrtmq 186
                 6666666655444333.....33666666666555332211223322.23333233333333333444444445333322222.........2233333 PP

      AAA_23 154 ..........................................................r 154
                                                                           +
  EPX74125.1 187 rkeakveeintllreeieprlaklrsekktfleyqqvyndierlsqicvafdyhnlsiK 245
                 33354445555555555555554444444444444444444444444444444444443 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.38
      AAA_23  82 kdgrytrsiererelskkkgkttkkaklelleideleqfise.llgskkiilnlilflgqerfeefelkdkke....rleelekeleeledekkllekl 175
                 k++   +++e +r l+++k+++++++ +   + +el   +s+ l +s+  ++ ++  l++ r e ++l+++ke    +l++l+k + ele ++ + +k+
  EPX74125.1 349 KKE---KNFEKSRLLYEQKNREYQQTLTAVKSQEELISSLSTgLSSSEGHEIGYSKKLHEARDELNQLNAEKEiermKLKNLSKRISELEPRRTEANKR 444
                 333...6899999999999999998866555555554444444444555599999999****9999998888888999999999999999999777765 PP

      AAA_23 176 eqekekekeleeleeeleeilkele 200
                   +++ ek+  +l+++ ++i++ le
  EPX74125.1 445 --QQQIEKQVAQLQQDVTKIESRLE 467
                 ..56799*************99886 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 3.9
      AAA_23 154 rleelekeleelede 168
                  +++l+ke e+l+de
  EPX74125.1 482 NVDQLRKEREQLSDE 496
                 222222222222222 PP

  == domain 4  score: 2.0 bits;  conditional E-value: 0.16
      AAA_23  87 trsiererelskkkgkttkkaklelleideleqfisellgskkiilnlilflgqer..........feefelkdkkerleelekeleeledekkllekl 175
                  r+++++ ++++++ +t k + ++ +  +++  +++++l+ k  +l+l   ++  +          + ++el+   +r+ +l + ++e+e+ +k++e+ 
  EPX74125.1 683 LREVSEKLKKIENEYSTLKHELGQVIAGNAQFHRLEQELQLKRHELSLMEEQKVNDplcrllieyhNCKEELSVLRQRMPNLDERIRENETSIKKIERD 781
                 56677777788888888888888888888888888888888877666666666666888888888855677788888**************99999999 PP

      AAA_23 176 .........eqekekekeleeleeeleeilk 197
                           +  e   el++l+e+l + +k
  EPX74125.1 782 mfewknnkgSKMTELHSELTKLKEKLLSSTK 812
                 9988887777777888888888888876665 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.7   5.5e-08   8.9e-05       1      26 [.      27      56 ..      27      85 .. 0.78
   2 ?   -0.9   1.8      0.67   1.1e+03      84     220 ..     176     315 ..     149     374 .. 0.76
   3 ?   -1.3   1.2      0.95   1.6e+03      66     140 ..     362     442 ..     322     573 .. 0.60
   4 !   14.3  10.5   1.6e-05     0.027      84     296 ..     804    1146 ..     782    1146 .. 0.70

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 5.5e-08
      AAA_21  1 lnvliGpNgsGKSnLLdaldllarl....d 26
                +n+++G NgsGKSn+Lda+ ++ +l     
  EPX74125.1 27 FNAITGLNGSGKSNILDAICFVLGLtnmsT 56
                8******************88866555442 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.67
      AAA_21  84 eeklssvetllesgllldkrsleeedvfnpeargirggvsvfslkelsvsepndlqfgkaltditsrawsllllldglrkerigllnifadyfgfakek 182
                 e+k ++++t +++   + + ++  + +  p+    r+ ++ f +++  +++ ++l ++ ++ d  +   +l++l          ++ i+  +   ak k
  EPX74125.1 176 ERKEKAFRTMQRKEAKVEEINTLLREEIEPRLAKLRSEKKTFLEYQQVYNDIERLSQICVAFDYHNLSIKLEHLEKQV---FQKQNGIAETESSIAKSK 271
                 555666666666666666666667777777777777777788888888888888888888888888888877777666...789999999999999999 PP

      AAA_21 183 rllqrlvrslklveielsdlgegeeliasvderlrer......g 220
                 + ++ l++++k+ e   s+ + ++ ++as d++l+ +       
  EPX74125.1 272 EEIKVLEKHIKDLEKICSTQMSASSEYASLDNQLQAAtekitrL 315
                 99999999999999999999999999999999887765555550 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 0.95
      AAA_21  66 lsqgvryryglrlersqv......eeklssvetllesgllldkrsleeedvfnpeargirggvsvfslkelsvsepndlqf 140
                 ++++ +y+  l+  +sq       ++ lss+e  +  +  +  ++++e ++ n+e++ +r  +++ s + +++++  ++ +
  EPX74125.1 362 EQKNREYQQTLTAVKSQEelisslSTGLSSSEGHEIGYSKKLHEARDELNQLNAEKEIERMKLKNLSKRISELEPRRTEAN 442
                 444555555555555555333333333333333334444444444444444444444444444444444444444433333 PP

  == domain 4  score: 14.3 bits;  conditional E-value: 1.6e-05
      AAA_21   84 eeklssvetllesgllldkrsleeedvfnpeargirggvsvfslkelsvsepndlqfgkaltditsrawsllllldglrkerigllnifadyfgfak 180 
                  +ekl s+ ++ e  +   ++++ ++  f +e  ++ + +s+f+   + ++e+ ++    ++++ ++r++ +++l ++ r  ++g +n  +++ ++ k
  EPX74125.1  804 KEKLLSSTKDVEEVENELNSAKLDRESFTSEILRFNDNASSFETSISHLKEELSELELNLNDEQRRRKSLTEKLEQETRR-YSGINNELNNLKTKLK 899 
                  55555555555555556666666666666666666666666666666666666666666666666666655555554444.5555555555555555 PP

      AAA_21  181 ekrllqrlvrslklveielsdlgegeeliasvderlrer.......................................................... 219 
                  +++        l++   + +d +e+e++ a+v++r++++                                                          
  EPX74125.1  900 VIDSSVNDQQLLSQKLKHEHDRLEREKNVAEVALRQLDKehswiqdrkqtfgqeatmfdfraqnirqckeqlaslkpkfasmrktinpkvmdmidgv 996 
                  5555555555555555555555666666666666666667777777777777777777777777777777777777777777777777777777777 PP

      AAA_21  220 .........................................................................gvvflengdgqelparelSdGtkr 243 
                                                                                             + +  g+  + +++elS G+++
  EPX74125.1  997 ekreaklkamirtihrdkrkiqetvysidkfkkqalektwievnaafgeifdellpgnsaelqppegkeftsgLEIRVRIGSIWKDSLAELSGGQRS 1093
                  777788888888888888888888888888888888888888888888888888888888888888888888777777777777788999******* PP

      AAA_21  244 ll..alltallralkkgsllliDEpEngLHPkllrrllellkelsrngaQviltT 296 
                  l   al+ +ll   +  + +++DE+++ L+ + +  + +l+k + + g+Q+i+++
  EPX74125.1 1094 LValALIMSLLKYKPA-PMYILDEIDAALDLSHTQNIGRLIKTKFK-GSQFIIVS 1146
                  *645777777777777.************************66655.9***9986 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.0   9.7e-08   0.00016      24      46 ..      27      49 ..      13      56 .. 0.85

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 9.7e-08
      AAA_29 24 atlltGpsGsGKSTllDAiqalL 46
                +  +tG +GsGKS +lDAi ++L
  EPX74125.1 27 FNAITGLNGSGKSNILDAICFVL 49
                679****************9998 PP

>> DUF2559  Protein of unknown function (DUF2559)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.8   3.4e-05     0.055      10      51 ..     172     213 ..     169     214 .. 0.92
   2 ?    1.1   0.7      0.26   4.3e+02       8      22 ..     356     370 ..     349     373 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 3.4e-05
                 HHHHHHHHHHHHHHHHHTT-------S-HHHHHHHHHHHHHH CS
     DUF2559  10 rLweqrrnanFqaSrrLeGlevplvtltaeealaRLeeLRrh 51 
                 r++e+r+++ F+  +r e    ++ tl +ee++ RL++LR++
  EPX74125.1 172 RMFEERKEKAFRTMQRKEAKVEEINTLLREEIEPRLAKLRSE 213
                 89****************8777788***************85 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.26
                 HHHHHHHHHHHHHHH CS
     DUF2559   8 ksrLweqrrnanFqa 22 
                 ksrL  +++n+ +q+
  EPX74125.1 356 KSRLLYEQKNREYQQ 370
                 99***********98 PP

>> DUF503  Protein of unknown function (DUF503)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.7    0.0002      0.33       9      35 ..     329     355 ..     321     375 .. 0.89
   2 ?   -1.1   0.3         1   1.7e+03       6      78 ..     957    1031 ..     954    1040 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.0002
      DUF503   9 rlpdvrSLKeKRsvvkslieklrnrfn 35 
                 ++++ +SLKeKR+   sl +k +++f+
  EPX74125.1 329 EIKNLKSLKEKRAAADSLRDKKEKNFE 355
                 68899****************999997 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 1
      DUF503    6 lelrlpdvrSLKeKRsvvkslieklrnrfnvSvaEvdeqdlwqraei..gvavvsnsrahveevldkvlrfiean 78  
                  +++r++++r  Ke  + +k+  + +r+  n  v ++ +    ++a++   + ++  ++++++e++ ++ +f ++ 
  EPX74125.1  957 FDFRAQNIRQCKEQLASLKPKFASMRKTINPKVMDMIDGVEKREAKLkaMIRTIHRDKRKIQETVYSIDKFKKQA 1031
                  677888888888888888888888999999999998887777777772246789999999999998887776665 PP

>> FUSC  Fusaric acid resistance protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.1      0.64     1e+03     216     291 ..     279     348 ..     258     392 .. 0.48
   2 ?   14.4   5.0   6.4e-06      0.01     234     328 ..     402     504 ..     394     521 .. 0.93
   3 ?    1.0   0.4     0.073   1.2e+02     251     331 ..     809     916 ..     786     936 .. 0.63

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.64
        FUSC 216 araralrrllsrmlallallsslarllarlraeeaaavpe....laallaelaaleaaaaaealeaalaalrarlralrr 291
                  +++ l  + s ++++++ + sl  +l++  ++ ++   +     + + +e+++           + l++ ra++++lr 
  EPX74125.1 279 KHIKDLEKICSTQMSASSEYASLDNQLQAATEKITRLSTSieikQSSMQEEIKN----------LKSLKEKRAAADSLRD 348
                 444555555555555555555555555555555554433322211122222222..........2222222223333333 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 6.4e-06
        FUSC 234 llsslarllarlraeeaaavpelaallaelaal.....eaaaaaealeaalaalrarlralrrale...adadtaalllarlaellaelaqllaslral 324
                  l++ +++l++l+ae++ ++ +l++l +++ +l     ea + ++++e+++a+l++++++++++le   +d+  + +l +++++l +e  ql +++++l
  EPX74125.1 402 KLHEARDELNQLNAEKEIERMKLKNLSKRISELeprrtEANKRQQQIEKQVAQLQQDVTKIESRLEsgvQDSTKEKILRQNVDQLRKEREQLSDEVDTL 500
                 58999************99999**********9999**99999*******************************************************9 PP

        FUSC 325 eaai 328
                 +++ 
  EPX74125.1 501 HSRL 504
                 9875 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.073
        FUSC 251 aavpelaallaelaal............eaaaaaealeaalaalrarlralrraleadadtaalllarlaellaelaqllaslraleaaiaa....... 330
                  ++++++++  el ++            +  + a+  e+ + +l ++l +l+ +l +++ ++  l + l ++ +++  ++ +l++l+   +        
  EPX74125.1 809 SSTKDVEEVENELNSAkldresftseilRFNDNASSFETSISHLKEELSELELNLNDEQRRRKSLTEKLEQETRRYSGINNELNNLKTKLKVidssvnd 907
                 222222222222222233333333333323345888999999999999999999999999999999999999999999999999998876655556555 PP

        FUSC 331 ........a 331
                         +
  EPX74125.1 908 qqllsqklK 916
                 555544444 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   1.8     0.024        39      60     110 ..     238     288 ..     214     295 .. 0.72
   2 ?    0.4   3.5      0.38   6.2e+02      38      80 ..     300     342 ..     288     387 .. 0.71
   3 ?   11.6   5.1   0.00013      0.21      54     105 ..     416     468 ..     400     474 .. 0.82
   4 ?    3.3   0.1     0.047        77      85     112 ..     479     506 ..     469     511 .. 0.51
   5 ?    1.0   1.3      0.25     4e+02      46      69 ..     686     709 ..     679     781 .. 0.42
   6 ?   10.4   3.0    0.0003      0.49      38     118 ..     781     864 ..     778     870 .. 0.86
   7 ?    5.1   1.4     0.014        22      69     122 ..     871     924 ..     866     926 .. 0.87
   8 ?    2.1   0.4      0.11   1.8e+02      48     116 ..     934    1002 ..     925    1014 .. 0.55
   9 ?    4.5   0.6     0.021        34      49     114 ..     963    1025 ..     954    1035 .. 0.53

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.024
     DUF1664  60 tkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeav 110
                   ++Ls ++++++k++ + ++ ++e+++ +++ +e+++ +++ ++ ++++ 
  EPX74125.1 238 DYHNLSIKLEHLEKQVFQKQNGIAETESSIAKSKEEIKVLEKHIKDLEKIC 288
                 456688888888888888888888888888888888888888888887765 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.38
     DUF1664  38 slsdavesvskqleqvseslaatkrhLssridrvdkkldeqke 80 
                 sl + ++  +++++++s+s++  +  ++++i+++ +  ++ ++
  EPX74125.1 300 SLDNQLQAATEKITRLSTSIEIKQSSMQEEIKNLKSLKEKRAA 342
                 6788888889999999999999999999999998764444433 PP

  == domain 3  score: 11.6 bits;  conditional E-value: 0.00013
     DUF1664  54 seslaatk.rhLssridrvdkkldeqkeiskeikeevtevredlseigedves 105
                  +++++ k ++Ls+ri +++ +  e ++ +++i+++v+++++d+++i++ +es
  EPX74125.1 416 EKEIERMKlKNLSKRISELEPRRTEANKRQQQIEKQVAQLQQDVTKIESRLES 468
                 45677666589************************************998875 PP

  == domain 4  score: 3.3 bits;  conditional E-value: 0.047
     DUF1664  85 ikeevtevredlseigedvesvkeaveg 112
                 ++++v+++r++ ++++++v+++++    
  EPX74125.1 479 LRQNVDQLRKEREQLSDEVDTLHSRLAY 506
                 3444555555555555555555544444 PP

  == domain 5  score: 1.0 bits;  conditional E-value: 0.25
     DUF1664  46 vskqleqvseslaatkrhLssrid 69 
                 vs++l+++ ++ ++ k++L + i+
  EPX74125.1 686 VSEKLKKIENEYSTLKHELGQVIA 709
                 455555555555555555544443 PP

  == domain 6  score: 10.4 bits;  conditional E-value: 0.0003
     DUF1664  38 slsdavesvskqleqvseslaatkrhL...ssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeavegleskle 118
                  + +  ++ +++++++ ++l++ k++L   ++++++v+++l++ k   ++ ++e+ + +++ s++++ ++++ke  ++le +l+
  EPX74125.1 781 DMFEWKNNKGSKMTELHSELTKLKEKLlssTKDVEEVENELNSAKLDRESFTSEILRFNDNASSFETSISHLKEELSELELNLN 864
                 566667778899999999****999995555789999999999999999************************99999998876 PP

  == domain 7  score: 5.1 bits;  conditional E-value: 0.014
     DUF1664  69 drvdkkldeqkeiskeikeevtevredlseigedvesvkeavegleskleriee 122
                 +++ +kl++ ++  + i++e+++++ +l+ i++ v+  + + ++l+++ +r+e 
  EPX74125.1 871 KSLTEKLEQETRRYSGINNELNNLKTKLKVIDSSVNDQQLLSQKLKHEHDRLER 924
                 578899999999999*****************9999999999999998888875 PP

  == domain 8  score: 2.1 bits;  conditional E-value: 0.11
     DUF1664   48 kqleqvseslaatkrhLssridrvdkkld...eqkeiskeikeevtevredlseigedvesvkeaveglesk 116 
                  +ql++  + +++ k+ + ++    d + +   ++ke  +++k + +++r+ ++    +v  + + ve+ e+k
  EPX74125.1  934 RQLDKEHSWIQDRKQTFGQEATMFDFRAQnirQCKEQLASLKPKFASMRKTIN---PKVMDMIDGVEKREAK 1002
                  68999999999999999999888886544000444444444444444444433...3333333333333333 PP

  == domain 9  score: 4.5 bits;  conditional E-value: 0.021
     DUF1664   49 qleqvseslaatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeavegle 114 
                  ++ q +e+la+ k +++s  ++++ k+   ++++  +++  ++++  +++i++d ++++e+v +++
  EPX74125.1  963 NIRQCKEQLASLKPKFASMRKTINPKV---MDMIDGVEKREAKLKAMIRTIHRDKRKIQETVYSID 1025
                  455555555555555554444444433...333444444444445555555555555555555544 PP

>> HALZ  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   1.0   0.00061      0.99      17      42 ..     479     504 ..     477     505 .. 0.85
   2 ?    2.6   0.3       0.1   1.7e+02       1      13 [.     691     703 ..     691     732 .. 0.78
   3 ?    2.6   1.1     0.096   1.6e+02      30      42 ..     795     807 ..     793     808 .. 0.92
   4 ?   -3.4   0.1       7.6   1.2e+04      33      42 ..     889     898 ..     886     899 .. 0.83
   5 ?    3.2   0.3     0.066   1.1e+02      16      29 ..     914     927 ..     913     929 .. 0.89

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00061
        HALZ  17 LksdydsLkkenekLkaelqeLkekl 42 
                 L+ ++d+L+ke+e+L  e+ +L ++l
  EPX74125.1 479 LRQNVDQLRKEREQLSDEVDTLHSRL 504
                 667888999*********99998876 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.1
        HALZ   1 KQLErDYdvLKas 13 
                 K++E +Y +LK+ 
  EPX74125.1 691 KKIENEYSTLKHE 703
                 99*********86 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.096
        HALZ  30 kLkaelqeLkekl 42 
                 +L++el +Lkekl
  EPX74125.1 795 ELHSELTKLKEKL 807
                 69**********8 PP

  == domain 4  score: -3.4 bits;  conditional E-value: 7.6
        HALZ  33 aelqeLkekl 42 
                 +el+ Lk kl
  EPX74125.1 889 NELNNLKTKL 898
                 7999999998 PP

  == domain 5  score: 3.2 bits;  conditional E-value: 0.066
        HALZ  16 aLksdydsLkkene 29 
                 +Lk+++d L++e++
  EPX74125.1 914 KLKHEHDRLEREKN 927
                 79*********995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1173 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2646  (0.147582); expected 358.6 (0.02)
Passed bias filter:                      542  (0.0302304); expected 358.6 (0.02)
Passed Vit filter:                       162  (0.00903564); expected 17.9 (0.001)
Passed Fwd filter:                       106  (0.00591221); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 2.67u 0.41s 00:00:03.08 Elapsed: 00:00:00.66
# Mc/sec: 5319.54
//
Query:       EPX74126.1  [L=583]
Description: ubiquitin-protein ligase E3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      1e-12   48.2   8.7    1.7e-12   47.4   8.7    1.4  1  zf-RING_2     Ring finger domain
    1.6e-09   37.9   5.3    3.9e-09   36.7   5.3    1.6  1  zf-rbx1       RING-H2 zinc finger domain
    2.5e-07   30.3   4.8    5.4e-07   29.3   4.8    1.5  1  zf-RING_11    RING-like zinc finger
    2.7e-07   30.3   7.1      5e-07   29.5   7.1    1.5  1  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
    7.1e-07   29.0   6.9    1.3e-06   28.1   6.9    1.5  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
    1.3e-06   28.3   1.2    2.7e-06   27.3   1.2    1.4  1  zf-ANAPC11    Anaphase-promoting complex subunit 11 RING-H2 f
    3.8e-06   26.7   6.4    6.6e-06   26.0   6.4    1.4  1  zf-RING_5     zinc-RING finger domain
    1.9e-05   24.4   5.5    3.8e-05   23.5   5.5    1.4  1  Prok-RING_4   Prokaryotic RING finger family 4
     0.0019   18.2   5.0     0.0042   17.1   5.0    1.6  1  zf-RING_UBOX  RING-type zinc-finger
     0.0021   17.8   5.4     0.0037   17.1   5.4    1.3  1  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
  ------ inclusion threshold ------
      0.058   13.0   3.8        0.1   12.2   3.8    1.4  1  Zn_ribbon_17  Zinc-ribbon, C4HC2 type
      0.093   12.8   0.9       0.21   11.7   0.9    1.6  1  zf-C3H2C3     Zinc-finger
       0.17   12.2   5.7       0.32   11.4   5.7    1.5  1  zf-RING-like  RING-like domain
       0.27   11.4   8.0       0.55   10.4   8.0    1.6  1  RINGv         RING-variant domain
       0.41   10.5   2.5        1.2    9.0   2.5    1.8  1  zf-Nse        Zinc-finger of the MIZ type in Nse subunit
        1.6    9.0   7.3       0.13   12.4   2.0    1.9  2  zf-C3HC4_4    zinc finger of C3HC4-type, RING
        1.8    8.4   6.8        3.5    7.5   6.8    1.5  1  zf-RING_4     RING/Ubox like zinc-binding domain


Domain annotation for each model (and alignments):
>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.4   8.7   1.6e-15   1.7e-12       2      44 .]     528     572 ..     527     572 .. 0.88

  Alignments for each domain:
  == domain 1  score: 47.4 bits;  conditional E-value: 1.6e-15
   zf-RING_2   2 eCpICleelssadsvlll.pCgHvfhreClerw.lrssstCPlCr 44 
                  C +Cl++++++d++++l  C H+fhreC+++w l s+++CPlCr
  EPX74126.1 528 RCLVCLSDYEQGDECRRLlSCEHFFHRECIDKWlLSSQNSCPLCR 572
                 7***************7769*************5555555****9 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.7   5.3   3.7e-12   3.9e-09      12      55 .]     527     572 ..     520     572 .. 0.78

  Alignments for each domain:
  == domain 1  score: 36.7 bits;  conditional E-value: 3.7e-12
     zf-rbx1  12 eacieckapgdee..cpvvlGeCgHaFHlhCiskWlkt.rkvCPlcr 55 
                 + c+ c ++ ++   c   l +C+H FH +Ci+kWl + +++CPlcr
  EPX74126.1 527 DRCLVCLSDYEQGdeCRRLL-SCEHFFHRECIDKWLLSsQNSCPLCR 572
                 556666554444344***99.9*************9776999****8 PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.3   4.8   5.1e-10   5.4e-07       2      29 .]     529     557 ..     529     557 .. 0.93

  Alignments for each domain:
  == domain 1  score: 29.3 bits;  conditional E-value: 5.1e-10
  zf-RING_11   2 CsICLeefkpgq.alfilpCsHtFHfkCI 29 
                 C +CL+++++g+ ++++l+C H FH +CI
  EPX74126.1 529 CLVCLSDYEQGDeCRRLLSCEHFFHRECI 557
                 9********8875889************9 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.5   7.1   4.7e-10     5e-07       1      40 []     528     571 ..     528     571 .. 0.83

  Alignments for each domain:
  == domain 1  score: 29.5 bits;  conditional E-value: 4.7e-10
  zf-C3HC4_2   1 kCpiCldmlkdpsvvt...pCgHvfCqkCilrsLeekn.eCPlC 40 
                 +C +Cl  ++++        C+H f+++Ci+++L +++ +CPlC
  EPX74126.1 528 RCLVCLSDYEQGDECRrllSCEHFFHRECIDKWLLSSQnSCPLC 571
                 6*********986555555*************7655555***** PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.1   6.9   1.2e-09   1.3e-06       1      41 []     529     571 ..     529     571 .. 0.97

  Alignments for each domain:
  == domain 1  score: 28.1 bits;  conditional E-value: 1.2e-09
                 -TTT-S--SS-E....E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepn...elleCkHsfCskCirkilksrkkvkCPlC 41 
                 C +Cl+ +++ +   +ll C+H f+++Ci+k+l  +++++CPlC
  EPX74126.1 529 CLVCLSDYEQGDecrRLLSCEHFFHRECIDKWLL-SSQNSCPLC 571
                 99**********99********************.89999**** PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.3   1.2   2.6e-09   2.7e-06      39      79 ..     536     573 ..     511     578 .. 0.80

  Alignments for each domain:
  == domain 1  score: 27.3 bits;  conditional E-value: 2.6e-09
                 STTTTTS-EEEBTTS-EEEHHHHHHHHHHHSTSSB-TTTSS CS
  zf-ANAPC11  39 kfpGddcplvlGkckhnfhlhcilkwletetskglcpmcrq 79 
                    Gd+c  +l +c+h fh  ci kwl   +s++ cp+cr 
  EPX74126.1 536 YEQGDECRRLL-SCEHFFHRECIDKWLL--SSQNSCPLCRA 573
                 3579***9887.7*************96..6899******7 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   6.4   6.3e-09   6.6e-06       1      43 [.     528     572 ..     528     573 .. 0.96

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 6.3e-09
   zf-RING_5   1 hCnkCfekl.skeekfyltsCgHifCekClkkll.ekeavCpiCr 43 
                 +C +C + + +++e   l+sC H+f+ +C++k l  +++ Cp+Cr
  EPX74126.1 528 RCLVCLSDYeQGDECRRLLSCEHFFHRECIDKWLlSSQNSCPLCR 572
                 6********999999*****************999*********9 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   5.5   3.6e-08   3.8e-05       1      39 [.     529     574 ..     529     580 .. 0.84

  Alignments for each domain:
  == domain 1  score: 23.5 bits;  conditional E-value: 3.6e-08
  Prok-RING_4   1 CvlCgeq....ekkailepCgHlvCkeCfdskdls...sCPlCqrr 39 
                  C++C +     ++ ++l +C+H + +eC d++ ls   sCPlC+ +
   EPX74126.1 529 CLVCLSDyeqgDECRRLLSCEHFFHRECIDKWLLSsqnSCPLCRAK 574
                  8899888777778899****************555567*****976 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   5.0   3.9e-06    0.0042       1      39 []     529     569 ..     529     569 .. 0.76

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 3.9e-06
  zf-RING_UBOX   1 CpIClelft.....dPlvlpCGHtFCreClwelskslegafkCP 39 
                   C +Cl++++     +  +l+C H F+reC+   +  l+ + +CP
    EPX74126.1 529 CLVCLSDYEqgdecRR-LLSCEHFFHRECI--DKWLLSSQNSCP 569
                   99******98854322.459**********..555667777776 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   5.4   3.5e-06    0.0037       3      46 ..     527     574 ..     525     575 .. 0.86

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 3.5e-06
                 SB-TTTSSS....BS-EEETTEEEEEE-HHHHHHHHH.TT-B-TTT--B CS
  zf-C3HC4_3   3 eeCviCler....prnvvllpCgHlvlCeeCaekllk.rkkkCpiCrrp 46 
                 + C++Cl+     +++  ll C H+ +  eC +k+l  ++++Cp+Cr++
  EPX74126.1 527 DRCLVCLSDyeqgDECRRLLSCEHF-FHRECIDKWLLsSQNSCPLCRAK 574
                 68******644557778999*****.********9877*********75 PP

>> Zn_ribbon_17  Zinc-ribbon, C4HC2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   3.8   9.9e-05       0.1      19      46 ..     543     569 ..     523     575 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 9.9e-05
  Zn_ribbon_17  19 vlcgvCeHvlHasCarewfenddlaeCp 46 
                       +CeH  H +C+++w+   + ++Cp
    EPX74126.1 543 RRLLSCEHFFHRECIDKWLLSSQ-NSCP 569
                   45568*************66666.6888 PP

>> zf-C3H2C3  Zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.9    0.0002      0.21      16      34 ..     547     571 ..     545     572 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.0002
   zf-C3H2C3  16 sCkHlvHakCad......eevCPkC 34 
                 sC+H +H++C d      ++ CP+C
  EPX74126.1 547 SCEHFFHRECIDkwllssQNSCPLC 571
                 9*********983333334779999 PP

>> zf-RING-like  RING-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   5.7    0.0003      0.32       1      43 []     529     571 ..     529     571 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.0003
  zf-RING-like   1 CeaCkeivtqGvrCsn.esCnvrlHvdCfqhyirthsskkCpkC 43 
                   C +C +   qG  C +  sC+  +H +C+++ +  +s+++Cp C
    EPX74126.1 529 CLVCLSDYEQGDECRRlLSCEHFFHRECIDKWL-LSSQNSCPLC 571
                   889999999*****65269*************9.66777***99 PP

>> RINGv  RING-variant domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   8.0   0.00052      0.55       1      48 []     529     571 ..     529     571 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00052
                 ETTTTEE-SSSS--B-SS--STCCCSB-HHHHHHHHHHTCT-SB-TTT CS
       RINGv   1 CriCleeeeeseplispCkCrGslklvHesClekWldekeantqCeiC 48 
                 C +Cl + e+ ++  +  +C+   +++H++C++kWl +  ++++C +C
  EPX74126.1 529 CLVCLSDYEQGDECRRLLSCE---HFFHRECIDKWLLS--SQNSCPLC 571
                 666666666666555555555...59**********99..9999***9 PP

>> zf-Nse  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   2.5    0.0011       1.2      29      56 ..     547     571 ..     527     572 .. 0.91

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.0011
                 SS--EEEHHHHHHHCTTTS-EE-SCCC- CS
      zf-Nse  29 kCpHvFEreaIlelikrkktvkCPvagC 56 
                  C+H+F re I + +  + +  CP+  C
  EPX74126.1 547 SCEHFFHRECIDKWL-LSSQNSCPL--C 571
                 6**************.89999***9..7 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.3       4.5   4.7e+03      21      29 ..     529     537 ..     527     543 .. 0.75
   2 ?   12.4   2.0   0.00012      0.13      14      42 .]     546     571 ..     544     571 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 4.5
  zf-C3HC4_4  21 ClsCisslq 29 
                 Cl C+s + 
  EPX74126.1 529 CLVCLSDYE 537
                 888888765 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 0.00012
  zf-C3HC4_4  14 leCGhsfClsCisslqkepdgeqllCplC 42 
                 l+C+h f  +Ci+++  ++++   +CplC
  EPX74126.1 546 LSCEHFFHRECIDKWLLSSQN---SCPLC 571
                 79***************9977...6***9 PP

>> zf-RING_4  RING/Ubox like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   6.8    0.0033       3.5       1      45 [.     529     573 ..     529     574 .. 0.93

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0033
   zf-RING_4   1 cplCdeeldetdkdlkpCeCgyqiClfCyhrileeeegrCPaCre 45 
                 c +C ++ ++ d+  +  +C++ + + C ++ l ++++ CP Cr 
  EPX74126.1 529 CLVCLSDYEQGDECRRLLSCEHFFHRECIDKWLLSSQNSCPLCRA 573
                 788999999999999999**************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (583 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1341  (0.074795); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                        20  (0.00111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.61u 0.29s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 3989.72
//
Query:       EPX74127.1  [L=106]
Description: reiske ISP-associated protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-18   65.5   0.3    3.3e-18   65.5   0.3    1.7  2  QCR10     Ubiquinol-cytochrome-c reductase complex subunit (Q


Domain annotation for each model (and alignments):
>> QCR10  Ubiquinol-cytochrome-c reductase complex subunit (QCR10)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1      0.11     2e+03      14      34 ..      15      35 ..      12      41 .. 0.63
   2 !   65.5   0.3   1.9e-22   3.3e-18       3      62 ..      46     105 ..      44     106 .] 0.96

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.11
       QCR10 14 ptlalfGgaagvavlfftsgv 34
                + l lf     +a + f+ + 
  EPX74127.1 15 IPLSLFSIQNWFAMVPFFFNK 35
                556777777777766665544 PP

  == domain 2  score: 65.5 bits;  conditional E-value: 1.9e-22
       QCR10   3 gitlktltrygptlalfGgaagvavlfftsgvPrvqkdiLqkiPvigsyfkkeippeDnp 62 
                  it++++++++p    +  aag+av++f+ +vP+v+++iLq i ++g++fk+++p+eD++
  EPX74127.1  46 FITPERTAKTIPAVSRWTLAAGAAVFLFAMQVPKVKTTILQPIAFLGDHFKDKTPEEDKW 105
                 69********************************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       245  (0.013665); expected 358.6 (0.02)
Passed bias filter:                      198  (0.0110436); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.21s 00:00:00.59 Elapsed: 00:00:00.38
# Mc/sec: 845.95
//
Query:       EPX74128.1  [L=417]
Description: transcription factor Rsv1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.6e-09   36.2  14.2     0.0001   22.6   2.1    2.9  2  zf-C2H2      Zinc finger, C2H2 type
    1.5e-07   31.5  13.4      1e-06   28.9   1.9    3.7  3  zf-H2C2_2    Zinc-finger double domain
    2.3e-06   28.0  11.3     0.0049   17.6   1.1    2.9  2  zf-C2H2_4    C2H2-type zinc finger
     0.0032   17.7   2.0      0.023   15.0   0.9    2.3  2  zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
      0.005   17.1   2.4      0.014   15.7   2.4    1.8  1  zf-Di19      Drought induced 19 protein (Di19), zinc-binding
  ------ inclusion threshold ------
        0.8    9.8   4.3         14    5.8   0.2    2.7  2  zf-C2H2_6    C2H2-type zinc finger


Domain annotation for each model (and alignments):
>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   4.5   8.1e-07    0.0024       1      23 []       4      26 ..       4      26 .. 0.99
   2 !   22.6   2.1   3.4e-08    0.0001       1      23 []      32      56 ..      32      56 .. 0.98

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 8.1e-07
                EEETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2  1 ykCpdCgksFkrksnLkrHirtH 23
                y+Cp+C + F r+++  rHir+H
  EPX74128.1  4 YECPYCRRIFHRQEHQARHIRSH 26
                99********************9 PP

  == domain 2  score: 22.6 bits;  conditional E-value: 3.4e-08
                EEET..TTTEEESSHHHHHHHHHCC CS
     zf-C2H2  1 ykCp..dCgksFkrksnLkrHirtH 23
                ++C+  dC k+F+r+++L rH rtH
  EPX74128.1 32 FVCSyfDCRKRFTRRDELIRHVRTH 56
                89**********************9 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.4    0.0021       6.2      13      24 ..       2      13 ..       1      15 [. 0.81
   2 !   28.9   1.9   3.3e-10     1e-06       4      26 .]      21      45 ..      20      45 .. 0.94
   3 ?    1.4   0.2      0.17   5.1e+02       2      10 ..      49      57 ..      48      62 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0021
   zf-H2C2_2 13 kpyeCplCdkaF 24
                k yeCp+C+  F
  EPX74128.1  2 KTYECPYCRRIF 13
                56******9766 PP

  == domain 2  score: 28.9 bits;  conditional E-value: 3.3e-10
   zf-H2C2_2  4 rHirkHtgekpyeCp..lCdkaFkt 26
                rHir+Htgekp+ C+   C+k+F++
  EPX74128.1 21 RHIRSHTGEKPFVCSyfDCRKRFTR 45
                9**************977*****85 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.17
   zf-H2C2_2  2 LrrHirkHt 10
                L rH r+H 
  EPX74128.1 49 LIRHVRTHL 57
                78******6 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   3.2   1.9e-05     0.057       1      23 [.       4      26 ..       4      27 .. 0.95
   2 !   17.6   1.1   1.6e-06    0.0049       1      23 [.      32      56 ..      32      57 .. 0.96

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.9e-05
   zf-C2H2_4  1 fkCpiCgksFsskkaLlrHlkth 23
                ++Cp+C++ F+++++  rH+++h
  EPX74128.1  4 YECPYCRRIFHRQEHQARHIRSH 26
                89*************999****9 PP

  == domain 2  score: 17.6 bits;  conditional E-value: 1.6e-06
   zf-C2H2_4  1 fkCpi..CgksFsskkaLlrHlkth 23
                f C++  C+k+F+++++L rH++th
  EPX74128.1 32 FVCSYfdCRKRFTRRDELIRHVRTH 56
                78**********************9 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.9   7.6e-06     0.023       2      24 ..       4      26 ..       3      26 .. 0.96
   2 ?    1.2   0.0      0.16   4.9e+02       7      24 ..      39      56 ..      37      57 .. 0.92

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 7.6e-06
                 CBBTTTTBBBSSHHHHHCCTTSH CS
  zf-C2H2_jaz  2 fYCvlCdKyFksenaldnHlkSK 24
                 ++C++C + F+ ++    H++S+
   EPX74128.1  4 YECPYCRRIFHRQEHQARHIRSH 26
                 89*******************97 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.16
                 TTBBBSSHHHHHCCTTSH CS
  zf-C2H2_jaz  7 CdKyFksenaldnHlkSK 24
                 C K F     l  H++++
   EPX74128.1 39 CRKRFTRRDELIRHVRTH 56
                 **************9987 PP

>> zf-Di19  Drought induced 19 protein (Di19), zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   2.4   4.6e-06     0.014       2      52 ..       3      56 ..       2      59 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 4.6e-06
     zf-Di19  2 sftCPyCgk.eltvkeLveHvedeHrveskevvCPv..Caekvtk..dlvaHltle 52
                ++ CPyC++  + ++   +H+ + H+ e k+ vC+   C ++ t+  +l++H++++
  EPX74128.1  3 TYECPYCRRiFHRQEHQARHIRS-HTGE-KPFVCSYfdCRKRFTRrdELIRHVRTH 56
                799******55777777788887.7765.789**9877988866444999999765 PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.5      0.01        30       2      13 ..       4      15 ..       3      17 .. 0.84
   2 ?    5.8   0.2    0.0047        14       4      26 ..      34      58 ..      32      59 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.01
   zf-C2H2_6  2 heCsvCsksFps 13
                +eC++C + F+ 
  EPX74128.1  4 YECPYCRRIFHR 15
                9*****998876 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0047
   zf-C2H2_6  4 Csv..CsksFpslqaLggHkksHrk 26
                Cs+  C k+F   ++L+ H ++H +
  EPX74128.1 34 CSYfdCRKRFTRRDELIRHVRTHLR 58
                55555******************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (417 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       744  (0.041497); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 3168.17
//
Query:       EPX74129.1  [L=686]
Description: long-chain-fatty-acid-CoA ligase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.2e-87  294.3   0.0    1.7e-87  293.8   0.0    1.1  1  AMP-binding  AMP-binding enzyme


Domain annotation for each model (and alignments):
>> AMP-binding  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  293.8   0.0   9.5e-92   1.7e-87      12     421 ..      90     546 ..      82     547 .. 0.85

  Alignments for each domain:
  == domain 1  score: 293.8 bits;  conditional E-value: 9.5e-92
                  EEEEECCSTEEEEHHHHHHHHHHHHHHHHHTTSSTT-EEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS-HHHHHHHHHHHTESEEEETCTCCCHHH CS
  AMP-binding  12 valvdsgegqtlTYreldervnrlAagLrslGvkkgdrVaillpnspewvvallailkaGavvvplnptltaeelayiledseakvliatvdsellek 109
                    l+  g ++ + Y e+++ + +l++gL+++G++ ++  ++++ +s  w++++++ l+ ++ +v+ + tl+++ +   le++  ++++  +d  ll+k
   EPX74129.1  90 WSLYELGPYEFINYLEVYDISMALGSGLKNIGITTDSSLLFFAATSEKWLMTAQGSLSQSIPIVTAYETLGEDGITTSLEECATSAVF--TDPSLLPK 185
                  555445678999*****************99*********************************************************..9*999999 PP

                  HHHHHSCC-EECEEEEESCCS-HCCHCCCHCCCCSCTTS............-TSCCCS-BTTSEEEEEEE--SSSS-EEEEEEHHHHHHHHHHHH..H CS
  AMP-binding 110 lleaaakleavklvivldadellkeeelkeeeeseekae............kpeeeeelkpddlayiiYTSGTTGkPKGVmlshrnlvanvaslk..l 193
                  l +  ++ + vk++i++++ +++k++el ++++ ++++             +p++++++k+dd+++ +YTSG+TGkPKGV+l hrn++a++  ++  l
   EPX74129.1 186 LVNPLKQCPLVKVIICSSD-PSEKQAELIHAAN-PKVRLltfhqllklgqdQPQPVVPPKADDVCCYMYTSGSTGKPKGVILLHRNIIAALGGINriL 281
                  *999999999999888775.5455545555553.334424577899999997778999***********************************97433 PP

                  HHCSCCTTT-EEEESS-TTSCHHHHHHHHHHHHTT-EEEE-TTCGCCH..HHHHHHHHHHHT-SEEEEEHHHHHHH...............HHCCCHH CS
  AMP-binding 194 etrfklkeddvvlsilplahifglilelllallsGatvvllpkdaald..pklllelieklkvtviagvPrvleal...............lesgalk 274
                     + ++++d vl++lplahif++ +++++++++Ga ++++++ + +d   + + +++ ++++tvi gvP+v+e +                      
   EPX74129.1 282 --AQHINAKDYVLAYLPLAHIFEF-IFEMCCFYWGAVLGYASPRTLTDasVTNCRGDMPEFRPTVIIGVPAVYELIkkgiltkvssmpihrQ------ 370
                  ..355678***************9.*******************9988677778**********************8888766444333220...... PP

                  CHHHHC.................................CGTT.-SEEEEESS-EBHHHHHHHHHHHTCEEEEEEEEGGGSSECEE.CHCTTTCTSTT CS
  AMP-binding 275 aakkak.................................dlss.lrlvllggeplspellrffralfgeevlegYGlTEttgvvtv.lpleedkkklg 337
                       k                                   ++ lr++++gg++l ++++ f++ ++++ vl gYGlTE ++  +v  p++++  +++
   EPX74129.1 371 -----KifsgalalkqyllkhnlpgiasldavvfnkvkaATGGrLRYCIAGGAALAATTQAFLSTTLCP-VLPGYGLTESCAGSFVlSPEQWH-LYAN 461
                  .....133444444455666667777777777777666644556**********************976.**************763444444.6889 PP

                  S-BEE-TTEEEEEE-TTTSCBEETTSE..EEEEEEETTS-SEBTT-HHHHHHHEEETCCEEEEEEEEEEETTSEEEEEEECCCEEE CS
  AMP-binding 338 svGkplpgvevkivDeetgepvpdgee..GellvrgpgvmkgYlkkpeataeafdsegrwlrTGDlgrldedGyleivgRkkdlik 421
                  svG+p+p +e k+vD  ++ +  +g++  Ge+++rgp v  gYl++p+ +a++f+ e++w++TGD+g+l +  +l++++Rkk+++k
   EPX74129.1 462 SVGFPIPSIEFKLVDIPELDYYSNGNPprGEVWIRGPAVCNGYLNRPDDNASSFT-EDGWFKTGDVGELVKGNTLRLIDRKKNIVK 546
                  ******************************************************9.867*********984556***********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (686 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       360  (0.0200792); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.30s 00:00:00.86 Elapsed: 00:00:00.44
# Mc/sec: 4682.74
//
Query:       EPX74130.1  [L=391]
Description: rhomboid family protease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-21   76.9  12.5    2.5e-20   73.0  12.5    2.2  1  Rhomboid  Rhomboid family


Domain annotation for each model (and alignments):
>> Rhomboid  Rhomboid family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.0  12.5   1.4e-24   2.5e-20       3     148 ..     176     379 ..     174     381 .. 0.89

  Alignments for each domain:
  == domain 1  score: 73.0 bits;  conditional E-value: 1.4e-24
                 GCC-TTHHHHGGG--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-S.................................. CS
    Rhomboid   3 krgelwrlltsmflHagwlHllfNmlallvfGsplerrlGslrflllyllsglagsllsllfsaeses............................... 70 
                 + g++w+l+ts+f+H +++Hll+N++a+++f++ + +r+G lr + +y+lsg++g++++l    + ++                               
  EPX74130.1 176 YDGRWWTLITSLFSHQNLTHLLVNCFAIYSFMPLIVHRFGILRSFSVYFLSGIMGNFVVLERLLRKDEvasskgslhvwdvlfnkesfsetqswlayik 274
                 6789****************************************************998865555555679**************************** PP

                 .......................-EESSHHHHHHHHHHHHHHHHCCCCGS----HC....CCCCCCCCCCHHHCTSS...STTTHHHHHHHHHHHHHHH CS
    Rhomboid  71 .......................plvGaSGaifgllgallvlvprnrkllrkliia.llllllfillnlvlgllpra...ggvsnlAHlgGllaGlllg 142
                                         ++GaSG ++g++++++ + p ++ ll+++i+a   ++l++ +l   l l++ +   +g+++ AH++G++ G+l +
  EPX74130.1 275 nkfslssfeaeknihtlssswrkGVLGASGSVYGIMALFACTYPLTQFLLFFIIPAqASTILPLDFLVESLLLTQNYdetTGIAFDAHVTGMILGTLSS 373
                 ***************************************************99999644444444444444444444888******************* PP

                 HHHCCH CS
    Rhomboid 143 llllrr 148
                 +ll+++
  EPX74130.1 374 FLLIPK 379
                 *99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (391 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       440  (0.0245412); expected 358.6 (0.02)
Passed bias filter:                      304  (0.0169558); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 2685.24
//
Query:       EPX74131.1  [L=188]
Description: hypothetical protein SOCG_03344 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.7e-26   90.3   0.0    1.1e-25   90.0   0.0    1.1  1  Haem_degrading  Haem-degrading


Domain annotation for each model (and alignments):
>> Haem_degrading  Haem-degrading
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.0   0.0   6.2e-30   1.1e-25       2     118 ..      48     176 ..      47     177 .. 0.90

  Alignments for each domain:
  == domain 1  score: 90.0 bits;  conditional E-value: 6.2e-30
  Haem_degrading   2 tledAkelgaaarakarek..gkpvviaivdaggqllffarmdgaspdnedwaerKantaarfgkstaalgeklk.............eedyagr 81 
                     + +d+  lg+ +r+   e+   +p+vi+ v  +g+++f+a+ dg+spdn+  ++rK  t+ rf++ + ++g +++             ee+y   
      EPX74131.1  48 SYSDCYSLGEIIRKLYSEAkyTAPIVIDMVI-NGHQVFHAAFDGSSPDNDAFIKRKYATVNRFHMASFRMGLMMTqggttmsgkynvpEEEYG-- 139
                     5678999999999999999788999999999.9******************************************999999877777777777.. PP

  Haem_degrading  82 vilgGGvpi.rvkggvvGaigvSGlkqeeDhqvavaal 118
                      ++gGG+pi    g  +G+i+vSGl q +Dh ++v a+
      EPX74131.1 140 -AFGGGFPItLSSGVQIGVICVSGLRQVQDHCIIVRAI 176
                     .********5455699******************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (188 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       378  (0.0210832); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1414.79
//
Query:       EPX74132.1  [L=143]
Description: 40S ribosomal protein S23 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-49  166.7   0.8    1.4e-49  166.5   0.8    1.1  1  Ribosom_S12_S23  Ribosomal protein S12/S23


Domain annotation for each model (and alignments):
>> Ribosom_S12_S23  Ribosomal protein S12/S23
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.5   0.8   7.8e-54   1.4e-49       2     114 .]      30     142 ..      29     142 .. 0.98

  Alignments for each domain:
  == domain 1  score: 166.5 bits;  conditional E-value: 7.8e-54
                      -------S-TSSTTSSEEEEEEEEEEEE---TT--S-EEEEEEEET.TSEEEEEEE-SSS..----TT-EEEEEE--.....BTTSTTEEEEBE CS
  Ribosom_S12_S23   2 kelrkktksdalegapqkrGvvlekvtveakkPnsAlRkvvrvrLikngkevtafipgegalnfldEhdevlvrGirrkgkavkDlpGvrykvv 95 
                      + l+++ ks+++ g+++++G+v+ek++veak+PnsA+Rk+vrv+Likngk+vtaf+p++g+lnf+dE+devl+ G++rkgka++D+pGvr+kvv
       EPX74132.1  30 RLLGTAFKSSPFGGSSHAKGIVVEKIGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLSGFGRKGKAKGDIPGVRFKVV 123
                      678899**************************************************************************************** PP

                      TS---TSSSTTTTT----T CS
  Ribosom_S12_S23  96 kvagvslkalskykkekpk 114
                      kvagv l al+++kkekp+
       EPX74132.1 124 KVAGVGLAALFHEKKEKPR 142
                      *****************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       359  (0.0200234); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1087.68
//
Query:       EPX74133.1  [L=305]
Description: hypothetical protein SOCG_03346 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (305 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       576  (0.0321267); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 2118.56
//
Query:       EPX74134.1  [L=568]
Description: purine transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   8.6e-161  535.6  43.7     1e-160  535.3  43.7    1.1  1  Transp_cyt_pur  Permease for cytosine/purines, uracil, thiami
     0.0022   18.0   3.5     0.0022   18.0   3.5    2.7  3  COPI_assoc      COPI associated protein
  ------ inclusion threshold ------
       0.11   12.1   0.0        0.2   11.3   0.0    1.4  1  DUF3231         Protein of unknown function (DUF3231)


Domain annotation for each model (and alignments):
>> Transp_cyt_pur  Permease for cytosine/purines, uracil, thiamine, allantoin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  535.3  43.7  1.7e-164    1e-160       1     440 []      40     491 ..      40     491 .. 1.00

  Alignments for each domain:
  == domain 1  score: 535.3 bits;  conditional E-value: 1.7e-164
  Transp_cyt_pur   1 pvpeeeRtwktlnlfsiWlganlnintwvigalglalgLnwwqsvlviivgnligaifvallglaGakyGlpfpilsRasfGirgsllplllrvv 95 
                     pvp+  R w+++n++++Wl++++nintw+i++++++ gL ww++++++++g++i+a ++a  g+aG+ y+++fp+lsR+sfGi+gs++p+l+r+v
      EPX74134.1  40 PVPKRFRLWGPWNYVAFWLADAVNINTWMIAGTAVTSGLAWWEAWITVWIGYTISALILAAVGRAGSVYHISFPVLSRSSFGIWGSFWPILNRAV 134
                     8********************************************************************************************** PP

  Transp_cyt_pur  96 iaivwfgvqawiGsealllmlgkifgkwleigg..ailgtsltelvtffifwvvslvivllgvskirkffviaallvpvaafgfliwalvkaeg. 187
                     +a++w+gvqawiG+e+++lm+++i+++ ++i++   ++gt+++++v+ffifw+vs+v+++++v ++r++f++++ll+p aaf+fliwalvka+g 
      EPX74134.1 135 MACIWYGVQAWIGGECVTLMIRSIWPSYSHIPNtmSKSGTQTYQWVSFFIFWLVSNVAIWFPVYQLRHLFTVKSLLAPTAAFAFLIWALVKAHGa 229
                     *********************************9999********************************************************** PP

  Transp_cyt_pur 188 Gpvldkavklgkse...lflsavagvlagfatlilnapDFtryaktkkssvkiqlvavpllftlllligilvaaaakaayganawspldilakfd 279
                     G+ ++ ++ l k++   +++s+++++l +fatli+n+pDFtr+a+t++  +++q++++p+++ +++lig+lv++a+k++yg n+w+pld+l +f+
      EPX74134.1 230 GDAIHSPTTLNKWDhgwAVVSGIVSCLNNFATLIVNNPDFTRFATTPNTPLWPQIITIPVGYGITTLIGVLVGSASKSIYGNNIWNPLDLLSSFL 324
                     ***********9999******************************************************************************** PP

  Transp_cyt_pur 280 et.......agvllililvalaqlgvnisanllsagldlaallPkkinikrgsliaavialvivpwkllssssklftaflsllavflspvagvii 367
                     ++       agv++i+  + +aqlg+ni+an++sag+dl+al+P  ini+rg++ia++++++++pw+lls+s++ f + ls++avfls++agv++
      EPX74134.1 325 DHsnahgvrAGVFFIATGLGIAQLGTNIAANTVSAGNDLSALFPAVINIRRGAYIASIVGIAMCPWNLLSTSNS-FSNSLSAYAVFLSSFAGVML 418
                     **************************************************************************.******************** PP

  Transp_cyt_pur 368 adyfvvrrgylklaalytrrrgsaYwyrkgvNwravaayivGiaaglvgvagsvgikvvkgaeklfdlsylvG 440
                     ady+vvr+gylk+  lyt  + ++Yw+  g+++r +++yi+G+++++ g+ag++g kv+k a +++ l+yl+G
      EPX74134.1 419 ADYYVVRKGYLKISSLYTTDNKGPYWFFHGISVRGFISYICGLVINVTGLAGNIGDKVPKAALTMSKLAYLIG 491
                     ************************************************************************9 PP

>> COPI_assoc  COPI associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0      0.66   3.9e+03      34      53 ..     333     352 ..     319     360 .. 0.61
   2 !   18.0   3.5   3.7e-07    0.0022      10     103 ..     379     471 ..     372     485 .. 0.84
   3 ?   -2.5   0.1      0.85   5.1e+03      76      93 ..     489     505 ..     484     508 .. 0.63

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.66
  COPI_assoc  34 ilsiYiillgivlillEfrv 53 
                   +++ i++g++++ l +++
  EPX74134.1 333 RAGVFFIATGLGIAQLGTNI 352
                 45566666666666665555 PP

  == domain 2  score: 18.0 bits;  conditional E-value: 3.7e-07
  COPI_assoc  10 vvgglaillgisqliilfsnflsfilsiYiillg..ivlillEfrvpfeiykyfsfmfsylGRGlfyillgllvsyggvlsilialllflvGLvyi 103
                 +++ + i+++  +l++  ++f+   ls Y+++l+  ++++l+++ v+ + y ++s +++   +G + ++ g+ v   g++s++++l++ ++GL+  
  EPX74134.1 379 IASIVGIAMCPWNLLSTSNSFS-NSLSAYAVFLSsfAGVMLADYYVVRKGYLKISSLYTTDNKGPYWFFHGISVR--GFISYICGLVINVTGLAGN 471
                 5677889999999988755555.55677888877556799*********9999**********************..9***************965 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 0.85
  COPI_assoc  76 llgllvsyggvlsilial 93 
                 l+g+lvs+  +  i++++
  EPX74134.1 489 LIGILVSFL-IHIIICTI 505
                 788888866.44444444 PP

>> DUF3231  Protein of unknown function (DUF3231)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   3.4e-05       0.2      38      80 ..       1      45 [.       1      47 [. 0.93

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 3.4e-05
     DUF3231 38 Flqvaedkeikelleralel.snkhikelkelLkeenl.piPsgf 80
                ++q++++ +ik++ +r + l +n+ +++ ++lL++e+l p+P+ f
  EPX74134.1  1 MSQSYKNSKIKDFVQRWILLnANSGMTISEQLLNNEDLyPVPKRF 45
                789***************999****************87999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (568 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       608  (0.0339115); expected 358.6 (0.02)
Passed bias filter:                      254  (0.014167); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.30s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 3866.07
//
Query:       EPX74135.1  [L=260]
Description: hypothetical protein SOCG_03348 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       854  (0.0476323); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.28s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1863.03
//
Query:       EPX74136.1  [L=446]
Description: TIM23 translocase complex subunit Tim50 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-45  154.4   0.0      3e-45  153.8   0.0    1.3  1  NIF       NLI interacting factor-like phosphatase


Domain annotation for each model (and alignments):
>> NIF  NLI interacting factor-like phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.8   0.0   1.7e-49     3e-45       1     156 []     171     319 ..     171     319 .. 0.97

  Alignments for each domain:
  == domain 1  score: 153.8 bits;  conditional E-value: 1.7e-49
         NIF   1 ktLVLDLDetLvhsklekskklkvegekvevsvlkRpgldefLkelsklyevvifTasseeyaeavidildpekkllshrlyrescvkkkgeyvKdLsl 99 
                 +tLVLDLD++L+h+ +         +++++++ +kRpgld+fL +ls +ye+vifT+++  +a+++id+ldp++ ++s++l+re+++ ++g+ +KdLs+
  EPX74136.1 171 YTLVLDLDDLLIHAGW---------TREHGWRTAKRPGLDYFLGYLSMYYEIVIFTNQYLATAKPIIDKLDPYHVSVSAVLTREHSKYEDGKLIKDLSY 260
                 79*************9.........99***********************************************************777********** PP

         NIF 100 lgrdlsrvvivDdspdsfelqpengipiksffsdkkDneLlkllpllkela..kvddvr 156
                 l+r+ls+v++vD +pd+f++qp+n+i + ++ +++kD+eL  l+pll+ +a    +dvr
  EPX74136.1 261 LNRPLSKVIMVDTNPDAFSKQPDNAISMVPWKGNHKDRELVGLIPLLEFIAimDIQDVR 319
                 ************************************************88875558887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (446 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       588  (0.032796); expected 358.6 (0.02)
Passed bias filter:                      366  (0.0204139); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 3223.17
//
Query:       EPX74137.1  [L=1218]
Description: COPII-coated vesicle component Sec31 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.4e-09   36.0   0.0    5.4e-09   36.0   0.0    2.8  3  SRA1         Steroid receptor RNA activator (SRA1)
    0.00047   19.9   0.0      0.021   14.5   0.0    2.7  1  Sec16_C      Sec23-binding domain of Sec16
     0.0008   20.2  13.4      0.061   14.2   0.1    6.0  7  WD40         WD domain, G-beta repeat
    0.00088   19.5   0.8        2.1    8.7   0.1    3.9  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
  ------ inclusion threshold ------
      0.033   14.2   0.2       0.14   12.2   0.2    2.0  2  Prp18        Prp18 domain


Domain annotation for each model (and alignments):
>> SRA1  Steroid receptor RNA activator (SRA1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.2   3.9       3.6   1.3e+04       7      26 ..     921     940 ..     907     954 .. 0.51
   2 ?   -5.3   1.4         5   1.8e+04       9      19 ..    1008    1017 ..    1002    1039 .. 0.47
   3 !   36.0   0.0   1.5e-12   5.4e-09       9     131 ..    1077    1213 ..    1047    1217 .. 0.79

  Alignments for each domain:
  == domain 1  score: -4.2 bits;  conditional E-value: 3.6
        SRA1   7 svaapppPsveavklsskee 26 
                 ++aapppP+   + +++ ++
  EPX74137.1 921 AAAAPPPPKIGEAYQPQAQN 940
                 34556666665444444433 PP

  == domain 2  score: -5.3 bits;  conditional E-value: 5
        SRA1    9 aapppPsveav 19  
                  aapp P+++a 
  EPX74137.1 1008 AAPP-PKASAN 1017
                  4333.332222 PP

  == domain 3  score: 36.0 bits;  conditional E-value: 1.5e-12
        SRA1    9 aapppPsveavklsskee...........kslsesesepeledvlsvLnqaLeaCrksvkkq...vcddvekrLrlledsWksGkLslpvrkrmevL 91  
                    +ppP+  + k +s +             +  +s+  p+l+ + ++Ln  +    +sv  q   v +d+ekrL++l d  ++  Ls p    +  L
  EPX74137.1 1077 VVSPPPQNISSKRQSASGpsaittgittyPQGDRSHIPPNLKPIYEMLNAEFLRVSQSVPPQmsrVLHDMEKRLNMLYDRLNANALSKPLTDELYAL 1173
                  3334444433333333325666666644334445667799999999**9999999999965433389****************************** PP

        SRA1   92 sqelqskrWdaaDdihrsLmvDhvtevsqWmvGvkrLiae 131 
                  +  l ++ +++a +i  +L+     +   W+vG+ rLi  
  EPX74137.1 1174 AVALTNRDYQSASNIQVTLVTTLQDQCEHWIVGITRLITI 1213
                  **************************************75 PP

>> Sec16_C  Sec23-binding domain of Sec16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   5.9e-06     0.021       1     149 [.     556     685 ..     556     777 .. 0.68

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 5.9e-06
                 HHHHHHTT-HHHHHHHHHHTT-HHHHHHHHHTS-HHHHHHHHHHHHH---.---THHHHHHHHHHTTT-HHHHHHHHHH...........-HHHHHHHH CS
     Sec16_C   1 iqalLlrGdrekAlqlAldkklWahAlliasllgkelwkevvqefvrselkegensesLrvlyqvfaGnseeavdelvptsaraslqqaeeskeaeeal 99 
                 i ++Ll+Gd  +A++ ++d k  + Al +a   ++e+ k v + f + +    ++ + +r+   +  +  e+a                     ++  l
  EPX74137.1 556 ITKMLLTGDILSAIKTCIDDKKISEALFLATFGDEECRKCVRKAFYEIQE---HKPSYMRLSACIADNDLENA--------------------VQNADL 631
                 789****************************************9986444...45566776544443333333....................234568 PP

                 HSHHHHHHHHHHTS--HH.HHHHHHHHHHHHH...TT-HHHHHHHHHHT-SSS. CS
     Sec16_C 100 dkWretvalvlsnrspsd.seaLtalGdlLas...kgrveaahicyllalsqts 149
                 ++W+++  +++    ++  s     lG+ L          aa++cy+ ++s +s
  EPX74137.1 632 SQWKDIFVFICTYAANDAfSPLCGILGKRLEDlddFSSNRAAEFCYIASKSLQS 685
                 888888888888888888566666788888772223455788888888855443 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.34   1.2e+03      19      38 .]      20      48 ..       8      48 .. 0.74
   2 ?    4.2   0.0     0.025        89      13      38 .]     128     146 ..     115     146 .. 0.79
   3 ?   -4.0   0.0         5   1.8e+04      13      29 ..     174     184 ..     164     189 .. 0.60
   4 ?    2.9   0.0     0.065   2.3e+02      11      29 ..     213     233 ..     201     244 .. 0.71
   5 !   14.2   0.1   1.7e-05     0.061       3      38 .]     251     288 ..     249     288 .. 0.80
   6 ?    2.3   0.2       0.1   3.7e+02      24      37 ..     310     330 ..     294     331 .. 0.71
   7 ?   -3.3   0.0         5   1.8e+04       9      25 ..     340     363 ..     336     367 .. 0.60

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.34
                ETTSSEEEEEET.........TSEEEEEE CS
        WD40 19 spdgawlasGsd.........DgtvriWd 38
                ++++++la G++         D+ + iWd
  EPX74137.1 20 NDNQPLLAVGGYigtestresDNLLEIWD 48
                456666888876666677788*******9 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.025
                 E.EEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  13 v.tslafspdgawlasGsdDgtvriWd 38 
                 v t l        lasG+ +g v +Wd
  EPX74137.1 128 VqTNL--------LASGDNNGDVWVWD 146
                 44455........899999*******9 PP

  == domain 3  score: -4.0 bits;  conditional E-value: 5
                 EEEEEEETTSSEEEEE..E CS
        WD40  13 vtslafspdgawlasG..s 29 
                 v+++        lasG  s
  EPX74137.1 174 VSHI--------LASGnsS 184
                 6666........8888533 PP

  == domain 4  score: 2.9 bits;  conditional E-value: 0.065
                 SSEEEEEEETTSSE.EEEE.E CS
        WD40  11 ssvtslafspdgaw.lasG.s 29 
                 ++v+s+a++p++a  l+++ +
  EPX74137.1 213 GGVNSIAWHPENATrLVTAiD 233
                 34*********9987666654 PP

  == domain 5  score: 14.2 bits;  conditional E-value: 1.7e-05
                 EEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 
                 ++ +ltGH +   sl+++p+ +  l+s+++Dg   +Wd
  EPX74137.1 251 PQNVLTGHqKAALSLSWCPHDSRfLLSSGKDGRAIVWD 288
                 68899***877679995555555378999********9 PP

  == domain 6  score: 2.3 bits;  conditional E-value: 0.1
                 E.......EEEEETTSEEEEE CS
        WD40  24 w.......lasGsdDgtvriW 37 
                 w       +a++s Dg+v i+
  EPX74137.1 310 WcpsnsnrVATSSLDGKVSIF 330
                 15555556999999****997 PP

  == domain 7  score: -3.3 bits;  conditional E-value: 5
                 SS.SS...EEEEE...EETTSSEE CS
        WD40   9 GH.ss...vtsla...fspdgawl 25 
                 +H  s   vts++   f  + + +
  EPX74137.1 340 THeASlqgVTSIDdneFFNNLPSI 363
                 465445559999776655555555 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.1   0.00058       2.1       6      80 ..     129     205 ..     123     223 .. 0.80
   2 ?    1.8   0.0     0.086   3.1e+02      33      61 ..     207     236 ..     187     244 .. 0.74
   3 !    5.3   0.0    0.0067        24      37      77 ..     258     299 ..     241     313 .. 0.83
   4 ?   -0.4   0.0      0.41   1.5e+03      50      78 ..     315     343 ..     306     352 .. 0.72

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00058
  ANAPC4_WD40   6 tmDLiAlatedgellvfRl.ngqrvwtleedkedsevrsLaWkpd.gklLavaysdgevrlldaesgkvvhslsvks 80 
                  + +L+A + ++g+++v  l n  + ++l++++++se++ +aW+ +  ++La + s     + d + ++ + +ls+  
   EPX74137.1 129 QTNLLASGDNNGDVWVWDLkNPLKPFSLPKQNRSSEIHVVAWNSKvSHILASGNSSEYTTVWDLKAKRQILNLSYMG 205
                  568999999*******999677899*****************976489*******9999999999888877776654 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.086
  ANAPC4_WD40  33 eedkedsevrsLaWkpdg.klLavaysdge 61 
                  + ++  + v+s+aW+p++ + L+ a++d++
   EPX74137.1 207 TGTNATGGVNSIAWHPENaTRLVTAIDDNR 236
                  56788899*******976257888888886 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.0067
  ANAPC4_WD40  37 edsevrsLaWkp.dgklLavaysdgevrlldaesgkvvhsls 77 
                  +++   sL+W p d ++L  + +dg+  + d+ +g+ + +++
   EPX74137.1 258 HQKAALSLSWCPhDSRFLLSSGKDGRAIVWDVDTGESLGNFP 299
                  6778889***8736689*******************998876 PP

  == domain 4  score: -0.4 bits;  conditional E-value: 0.41
  ANAPC4_WD40  50 gklLavaysdgevrlldaesgkvvhslsv 78 
                   +  a +  dg+v++++++s+++ ++ ++
   EPX74137.1 315 SNRVATSSLDGKVSIFSIQSTNTDKTHEA 343
                  45677888899999999999887666555 PP

>> Prp18  Prp18 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.2   3.8e-05      0.14      31      84 ..    1139    1192 ..    1122    1210 .. 0.88
   2 ?   -2.4   0.0       1.2   4.4e+03     124     138 ..    1201    1215 ..    1195    1217 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 3.8e-05
       Prp18   31 esatlkqtkedlkpLlkklkkkkleedileklveivkalqkreyvkAndaYlkl 84  
                   s +l++ ++ l+ L ++l+ + l++ ++++l+ +  al++r+y++A+++ ++l
  EPX74137.1 1139 MSRVLHDMEKRLNMLYDRLNANALSKPLTDELYALAVALTNRDYQSASNIQVTL 1192
                  556788999**************************************9987766 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.2
       Prp18  124 RkyiqalkRlltfaq 138 
                   ++i ++ Rl+t+++
  EPX74137.1 1201 EHWIVGITRLITISK 1215
                  579*********976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1218 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       776  (0.0432818); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.85u 0.30s 00:00:01.14 Elapsed: 00:00:00.46
# Mc/sec: 7896.85
//
Query:       EPX74138.1  [L=604]
Description: CMGC/RCK protein kinase Mde3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.9e-61  205.7   0.0    1.1e-60  205.2   0.0    1.2  1  Pkinase        Protein kinase domain
    2.6e-38  131.8   0.0    6.4e-38  130.5   0.0    1.6  2  Pkinase_Tyr    Protein tyrosine kinase
     0.0014   17.6   0.1     0.0028   16.7   0.1    1.4  1  Haspin_kinase  Haspin like kinase domain
     0.0019   17.6   0.0     0.0038   16.6   0.0    1.4  1  Kdo            Lipopolysaccharide kinase (Kdo/WaaP) family
  ------ inclusion threshold ------
      0.016   14.6   0.0      0.025   13.9   0.0    1.3  1  Kinase-like    Kinase-like


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  205.2   0.0   3.1e-64   1.1e-60       2     261 ..      22     321 ..      21     323 .. 0.86

  Alignments for each domain:
  == domain 1  score: 205.2 bits;  conditional E-value: 3.1e-64
                 EEEEEEEEESSEEEEEEE...ETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHS.CTTB--EEEEEEE.SSEEEEEEE--TTEBHHHHHH.HHS CS
     Pkinase   2 ekleklGeGsfGkVykav...eketgkivAvKkikkekakkkke.kkvlrEikilkklk.hpnivrlyevfee.kdelylvleyveggeladlle.rkg 93 
                  +++klG GsfG+Vy a+   ++  ++ vAvKk+k++++ k k+    lrE  +l++++ hp ++ l+e+f + ++++ylv+e++e + l ++l+ r+g
  EPX74138.1  22 YVKHKLGDGSFGTVYLAKckgKQGHDQVVAVKKLKTSSKPKPKQeLLKLRESLVLRQISkHPSLIDLLETFMDpNRNIYLVMECMEAN-LYQILKrRQG 119
                 5789**********98873233456789********9998888745569*********99**********9997889*********77.8888886555 PP

                 S.--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTE........EEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHH.TTSCBSHHHHHHH CS
     Pkinase  94 s.lseeeakkiakqilegleylHskgiiHrDlKpeNiLidekge........lKitDFGlakelessskltsfvgtseYlAPEvl.keneyskkvDvWs 182
                 + +++ +a +i++qi++g+e++H +g++HrD+KpeNiL+++  +        +Ki+DFGla+  +s+ +lt++v t++Y+APE+l ++++y+k+vD+++
  EPX74138.1 120 KpFTKYTACHILNQIVRGIEHIHTHGFMHRDVKPENILVKKVTDrpvfsrysVKIADFGLARSSTSDDSLTEYVSTRWYRAPELLlRAKNYGKAVDMYA 218
                 56**************************************744456777788*********************************9************* PP

                 HHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCT.......SHH...HHHTTS........................-HHHHHHHHHHT-SSGC CS
     Pkinase 183 lGvilyelltgkppfsgekgkekvekeldqlekilkilg.......etkeklpeasei........................seeakdllkkllkkdpk 250
                  G+i +e++t kp+f+g+++       +dql +i++ilg       ++   +p+a+e+                        ++  ++++ +ll++dp 
  EPX74138.1 219 FGCITFEVFTLKPLFPGRNE-------TDQLNRICEILGnpllnvkDKLHYWPTAKELavklgfsfsatrpyplrkllpancDDMYTEMIAQLLAWDPF 310
                 ****************5555.......5566667777776666332444455666666***********************99999************* PP

                 CSTTHHHHHTS CS
     Pkinase 251 kRltaeellqh 261
                  R++a +++++
  EPX74138.1 311 IRPSAVSCKEK 321
                 *****998874 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.5   0.0   1.8e-41   6.4e-38       4     201 ..      24     229 ..      22     250 .. 0.89
   2 ?   -4.1   0.0       2.1   7.4e+03     227     255 ..     290     318 ..     286     320 .. 0.84

  Alignments for each domain:
  == domain 1  score: 130.5 bits;  conditional E-value: 1.8e-41
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHH..HHHHHHTS.-BTTB--EEEEEE.SSSSEEEEEE--TTEBHHHHHHHTCT CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelle..eakimkkl.khpnivkllgvct.keepllivteyvkgGdLlkfLrkkek 97 
                  ++klG G+fG+V+ +++k  k+ +++ VavK+lk +++ + k+ell+  e  +++++ khp ++ ll   +  ++++++v+e ++  +L + L++++ 
   EPX74138.1  24 KHKLGDGSFGTVYLAKCK-GKQGHDQVVAVKKLKTSSKPKPKQELLKlrESLVLRQIsKHPSLIDLLETFMdPNRNIYLVMECME-ANLYQILKRRQG 119
                  689***************.8899999**************99*998777********************9978889******887.59********** PP

                  TTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE........TTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS.-HHHHHHSE.EEHH CS
  Pkinase_Tyr  98 ekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse........nkvvkisDfGLardiekddeyvkkeeaklpvkWm.apEslkekk.ftsk 185
                  +++t  + +++  q+ +G+e+++++ ++Hrd+   N+L+++        +  vki+DfGLar+ ++dd+ +    + ++ +W+ apE l + k + ++
   EPX74138.1 120 KPFTKYTACHILNQIVRGIEHIHTHGFMHRDVKPENILVKKvtdrpvfsRYSVKIADFGLARSSTSDDSLT----EYVSTRWYrAPELLLRAKnYGKA 213
                  ****************************************9999**99899***********996666664....567788877***976554499** PP

                  HHHHHHHHHHHHHHTT CS
  Pkinase_Tyr 186 sDvWsfGvllwEiftl 201
                   D+++fG +++E+ftl
   EPX74138.1 214 VDMYAFGCITFEVFTL 229
                  **************95 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 2.1
                  BTTSBHHHHHHHHHHT-SSGGGS--HHHH CS
  Pkinase_Tyr 227 pekcpeelyelmkkcweedpeeRptfsel 255
                  p++c +  +e++ + ++ dp  Rp+  ++
   EPX74138.1 290 PANCDDMYTEMIAQLLAWDPFIRPSAVSC 318
                  89999999999999999999999987665 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.1   7.7e-07    0.0028     124     262 ..      48     188 ..      10     200 .. 0.64

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 7.7e-07
  Haspin_kinase 124 kevvlKviplevledvtiskelslkelkslklvkgtypglllllqdkvlkekpdfyseqqlflvlllkdkGtdLeev......klkswkqalsifw 213
                    + v++K++     +  + +++l+l e+  l+ +    p+l+ ll+ ++  ++          ++l+++ +  +L ++      k  +  +a +i+ 
     EPX74138.1  48 QVVAVKKLKTSSKPKPK-QELLKLRESLVLRQISKH-PSLIDLLETFMDPNR---------NIYLVMECMEANLYQIlkrrqgKPFTKYTACHILN 132
                    44444544443322222.235556666666555555.666666666666555.........44444444444444443323221122347889*** PP

  Haspin_kinase 214 qivkiLyvaEtkfeFEHRdLhldniLvdkn........lnvtlidlklsRlessegk 262
                    qiv  +    t   F HRd + +niLv+k           v + d+ l+R ++s++ 
     EPX74138.1 133 QIVRGIEHIHT-HGFMHRDVKPENILVKKVtdrpvfsrYSVKIADFGLARSSTSDDS 188
                    *****999877.69***************99*******************9955543 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.1e-06    0.0038      87     154 ..      94     161 ..      65     182 .. 0.82

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.1e-06
         Kdo  87 gleyrAlllterlegaqdLedllakwae..laeelkrallkavgrliaklhragvnHadlyaknillqqe 154
                 ++++   l++e +e   +L ++l++ +   + +    ++l+++ r i+ +h  g +H+d+ + nil+++ 
  EPX74138.1  94 DPNRNIYLVMECMEA--NLYQILKRRQGkpFTKYTACHILNQIVRGIEHIHTHGFMHRDVKPENILVKKV 161
                 556666677777774..5777777644465777777889****************************976 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   6.9e-06     0.025      57     179 ..      43     160 ..      35     225 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 6.9e-06
  Kinase-like  57 erlkeqelairllrg.knpeqAkdhlrlllpfdlvkiqkkkpfiqlkskesiywvvnallllpaasvdleilnkvlqkrsethkkletiarlllTlql 153
                  ++ ++q+ a+++l+    p+  ++ l+l  +  l +i k + +i l +   +   +n +l++  ++ +l  +   l+ r+ + +     a ++l  q+
   EPX74138.1  43 KQGHDQVVAVKKLKTsSKPKPKQELLKLRESLVLRQISKHPSLIDLLETFMDP-NRNIYLVMECMEANLYQI---LKRRQGKPFTKY-TACHIL-NQI 134
                  6779999******99788888899999999**************999888887.79************9655...555666666555.555677.799 PP

  Kinase-like 154 irlaanLqakglvhgkftvdnlllde 179
                  +r + +++ +g +h +++++n+l ++
   EPX74138.1 135 VRGIEHIHTHGFMHRDVKPENILVKK 160
                  **********************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (604 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       519  (0.0289475); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.71u 0.37s 00:00:01.08 Elapsed: 00:00:00.60
# Mc/sec: 3044.31
//
Query:       EPX74139.1  [L=433]
Description: adenosylhomocysteinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   4.7e-136  452.8   0.0      7e-75  251.9   0.1    2.0  2  AdoHcyase      S-adenosyl-L-homocysteine hydrolase
    1.1e-84  282.4   3.3    1.8e-84  281.7   3.3    1.4  1  AdoHcyase_NAD  S-adenosyl-L-homocysteine hydrolase, NAD bindi
    4.7e-06   26.1   0.2    8.5e-06   25.2   0.2    1.3  1  2-Hacid_dh_C   D-isomer specific 2-hydroxyacid dehydrogenase,
    1.8e-05   24.4   0.1    3.1e-05   23.6   0.1    1.4  1  IlvN           Acetohydroxy acid isomeroreductase, NADPH-bind
     0.0055   17.3   0.2      0.012   16.2   0.2    1.5  1  F420_oxidored  NADP oxidoreductase coenzyme F420-dependent
  ------ inclusion threshold ------
      0.014   15.7   0.1      0.028   14.7   0.1    1.5  1  TrkA_N         TrkA-N domain
      0.027   14.4   0.1      0.042   13.7   0.1    1.4  1  3HCDH_N        3-hydroxyacyl-CoA dehydrogenase, NAD binding d


Domain annotation for each model (and alignments):
>> AdoHcyase  S-adenosyl-L-homocysteine hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  251.9   0.1   2.7e-78     7e-75       1     138 [.       5     142 ..       5     146 .. 0.98
   2 !  199.9   0.0   1.9e-62   4.9e-59     172     299 .]     143     432 ..     142     432 .. 0.99

  Alignments for each domain:
  == domain 1  score: 251.9 bits;  conditional E-value: 2.7e-78
                 --B-S-GGGHHHHHHHHHHHHCC-HHHHHHHHHCTTT-TTTT-EEEEES--SHHHHHHHHHHHHTT-EEEEE-SSTTT--HHHHHHHCCTTEEEE--TT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   AdoHcyase   1 dykvkdislaefGrkeielaekempglmalreeyaeekplkgariaGslhmtiqtavLietLvalGaevrWasCnifstqdeaaaaiaeagvpvfawkg 99 
                 +ykv+disla+fGrke+e+ae+empglma+re++a+++plkgariaG+lhmtiqtavLietLvalGaev+W+sCni+stqd+aaaaia++gvpvfawkg
  EPX74139.1   5 NYKVADISLAAFGRKELEIAENEMPGLMAIREKHAQSQPLKGARIAGCLHMTIQTAVLIETLVALGAEVTWSSCNIYSTQDHAAAAIAATGVPVFAWKG 103
                 69************************************************************************************************* PP

                 --HHHHHHHHHHCHS-SSTS-S-SEEEESSSHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   AdoHcyase 100 etleeywwcieqalkwaedekepnlilDdGGDltllvhk 138
                 et+eey+wcieq+lk   +++  n+ilDdGGDlt+lvh+
  EPX74139.1 104 ETEEEYIWCIEQQLKSFPSGQPLNMILDDGGDLTALVHE 142
                 ***************999999*****************8 PP

  == domain 2  score: 199.9 bits;  conditional E-value: 1.9e-62
                 HHCCCHCC--EEEE-SHHHHHHHHHHHHTT---SEEEESTTSHHHCTTH.................................................. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.................................................. RF
   AdoHcyase 172 kytellkkikGvseetttGvhrLyelakkgkLlvpainvndsvtkskfD.................................................. 220
                 +++ell +i+G+seetttGvh+Ly++ +++kL+vpainvndsvtkskfD                                                  
  EPX74139.1 143 RHPELLVNIRGISEETTTGVHHLYQMFHENKLKVPAINVNDSVTKSKFDnlfgckeslvdgikratdvmiagkvgvvagfgdvgkgcatslrnqgarvi 241
                 5789999******************************************************************************************** PP

                 ................................................................................................... CS
                 ................................................................................................... RF
   AdoHcyase 221 ................................................................................................... 220
                                                                                                                    
  EPX74139.1 242 vtevdpinalqaamdgyevttmeeavkegqifvtttgcrdiirgehfmamredsivcnighfdveidvawlkenakdcvnikpqvdryelsngrhvill 340
                 *************************************************************************************************** PP

                 .............S-HHHHHHHHHHHHHHHHHHHHTTSSS-SSEEE--CHHHHHHHHHCCCCCT-------HHHHHCCTSXTTSXXSXTTXX CS
                 .............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   AdoHcyase 221 .............hpsfvmsasftnqvlaqielfkkekkyekkvyvlpkklDekvarlhleklgaklteltkeqaeyigveveGPfkpdhYr 299
                              hpsfvms+sf+nqvlaq+ l++++++y+ +v++lpkklDe+varlhl kl++kltelt  q++y+g+++eGP+k+dhYr
  EPX74139.1 341 adgrlvnlgcatgHPSFVMSCSFANQVLAQMALWNDNQSYPLGVHMLPKKLDEEVARLHLGKLNVKLTELTPVQSKYLGISAEGPYKADHYR 432
                 *******************************************************************************************9 PP

>> AdoHcyase_NAD  S-adenosyl-L-homocysteine hydrolase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  281.7   3.3   7.2e-88   1.8e-84       1     162 []     192     353 ..     192     353 .. 1.00

  Alignments for each domain:
  == domain 1  score: 281.7 bits;  conditional E-value: 7.2e-88
                    HHHHHCCCCCHHHHHHH-S--TTSEEEEE--SHHHHHHHHHHHHCT-EEEEE-S-HHHHHHHHCTT-EE--HHHCTTT-SEEEE-SSSSSSB-HHH CS
  AdoHcyase_NAD   1 nlygcreslvdgikratdvllaGkvavvaGyGdvGkGcaaslkglGarvivtevdPicalqaameGfevvtleevvkkadivvtttGnkdiitleh 96 
                    nl+gc+eslvdgikratdv++aGkv vvaG+GdvGkGca+sl+++GarvivtevdPi+alqaam+G+ev+t+ee+vk+++i+vtttG++dii+ eh
     EPX74139.1 192 NLFGCKESLVDGIKRATDVMIAGKVGVVAGFGDVGKGCATSLRNQGARVIVTEVDPINALQAAMDGYEVTTMEEAVKEGQIFVTTTGCRDIIRGEH 287
                    89********************************************************************************************** PP

                    HCCS-TTEEEEE-SSTTTTBTHHHHHTTT-EEEEEETTEEEEE-TTS-EEEEEGGGSBCHHHTS-- CS
  AdoHcyase_NAD  97 lkkmkddaivcniGhfdseidvaaleanalkkeevkpqvdrvtlkdgkkiillaeGrllnlgcatg 162
                    + +m++d+ivcniGhfd eidva+l++na++++++kpqvdr++l++g+++illa+Grl+nlgcatg
     EPX74139.1 288 FMAMREDSIVCNIGHFDVEIDVAWLKENAKDCVNIKPQVDRYELSNGRHVILLADGRLVNLGCATG 353
                    ****************************************************************97 PP

>> 2-Hacid_dh_C  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.2   3.3e-09   8.5e-06      34     127 ..     212     301 ..     196     308 .. 0.91

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 3.3e-09
                   GTTSEEEEES-SHHHHHHHHHHHHTT-EEEEESSSHHHHHCHHHHTCEECSHHHHHHH-SEEEE-S--STTTTTSBSHHHHHCSTTTEEEEESS CS
  2-Hacid_dh_C  34 lsgktvGiiGlGrIGqavakrlkafgmkviaydrskkkeeeeeelgvelvsleellaesDivslhlpltpetrhlinaeelakmkkgailiNta 127
                   ++gk   + G+G++G+  a  l+  g++vi++++ + +  +++  g+e++++ee+++e +i + ++      r++i  e++ +m++++i+ N++
    EPX74139.1 212 IAGKVGVVAGFGDVGKGCATSLRNQGARVIVTEVDPINALQAAMDGYEVTTMEEAVKEGQIFVTTT----GCRDIIRGEHFMAMREDSIVCNIG 301
                   677777889**************************9988899999****************99755....5899******************98 PP

>> IlvN  Acetohydroxy acid isomeroreductase, NADPH-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   0.1   1.2e-08   3.1e-05       3      65 ..     213     274 ..     211     302 .. 0.89

  Alignments for each domain:
  == domain 1  score: 23.6 bits;  conditional E-value: 1.2e-08
                 HTS-EEEES-SHHHHHHHHHHHHTT--EEEEE-TT-HHHHHHHHTT-EEEEHHHHHHT-SEEE CS
        IlvN   3 kgkkiaviGyGsqGhaqalnlrdsgldvvvglregsksvkkAkeegfevltvaeavkkadvvm 65 
                  gk  +v G+G  G+  a+ lr++g  v+v+  +   ++ +A  +g+ev+t++eavk+ ++ +
  EPX74139.1 213 AGKVGVVAGFGDVGKGCATSLRNQGARVIVTEVDPI-NALQAAMDGYEVTTMEEAVKEGQIFV 274
                 56666889**********************999888.66678889*************99865 PP

>> F420_oxidored  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.2   4.6e-06     0.012       1      68 [.     215     276 ..     215     284 .. 0.74

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 4.6e-06
                    EEEEE.TTSHHHHHHHHHHHHTTS-GGCEEEEEESSCCCHHHHHHHHC-EEECECHHHHHHH-SEEEE- CS
  F420_oxidored   1 kigii.GaGnmgealasgllaagaqpheivvansrnpekaeelaeelgvkvtavdneeaaeeadvvvla 68 
                    k+g++ G+G++g++ a  l ++g     ++v+     + ++++ + +  +vt+   eea++e  + v +
     EPX74139.1 215 KVGVVaGFGDVGKGCATSLRNQG---ARVIVTEVDPINALQAAMDGY--EVTT--MEEAVKEGQIFVTT 276
                    799999*****************...999977333334444444444..4555..88999998887765 PP

>> TrkA_N  TrkA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.1   1.1e-05     0.028       2      44 ..     218     260 ..     217     269 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.1e-05
                 EEES-SHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHTTSEE CS
      TrkA_N   2 iiiGlGrvGrslaeeLseggkdvvvidkdeerveelreeglev 44 
                 +++G+G+vG+  a  L+++g +v+v + d+ ++ +++ +g+ev
  EPX74139.1 218 VVAGFGDVGKGCATSLRNQGARVIVTEVDPINALQAAMDGYEV 260
                 79****************6657********9999999999886 PP

>> 3HCDH_N  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   1.6e-05     0.042       2      56 ..     216     273 ..     215     326 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.6e-05
                 EEEE.--SCCHHHHHHHHHHTT-EEEEE-S-H.HHHHHHHHHHHH.HHHCCTTTTSS- CS
     3HCDH_N   2 vavi.GaGtmGagiaavfasagleVvlvdise.ealekalekiek.sleklvekgklk 56 
                 v+v+ G G +G+g a+ + ++g +V ++++++ +al++a++  e  ++e++v++g++ 
  EPX74139.1 216 VGVVaGFGDVGKGCATSLRNQGARVIVTEVDPiNALQAAMDGYEVtTMEEAVKEGQIF 273
                 5555499***********************8747889999988876889999999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (433 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       403  (0.0224776); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.66u 0.30s 00:00:00.96 Elapsed: 00:00:00.51
# Mc/sec: 2562.52
//
Query:       EPX74140.1  [L=308]
Description: alpha-1,2-galactosyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.6e-64  215.7   0.4    9.2e-64  215.4   0.4    1.1  1  Glyco_transf_34  galactosyl transferase GMA12/MNN10 family
  ------ inclusion threshold ------
       0.17   12.2   0.6         20    5.6   0.2    2.6  2  Cohesin_HEAT     HEAT repeat associated with sister chromatid


Domain annotation for each model (and alignments):
>> Glyco_transf_34  galactosyl transferase GMA12/MNN10 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  215.4   0.4     1e-67   9.2e-64       3     238 ..      57     285 ..      54     286 .. 0.95

  Alignments for each domain:
  == domain 1  score: 215.4 bits;  conditional E-value: 1e-67
  Glyco_transf_34   3 peivlllvsnekkcenssgdhelllkvikNrvdYaekhgyeifykkvsalla.eemnsvWaklpairaamkkyPeaewiWwlDqdAlimnmdls 95 
                      + i++l++sn + ++    + ++l+k +++r +Ya++hgy++++kk++++++ ++ +++W+ + air+++ ++Pea+wiW lD  A+imn+  s
       EPX74140.1  57 NSILMLVLSNDQISD----NPKFLDKLLSDRNEYAQRHGYQFIHKKAHEIERkYGSKNTWSLVTAIRETLYEHPEASWIWVLDPRAVIMNTGES 146
                      457777777777765....45699****************************99**************************************** PP

  Glyco_transf_34  96 leehvlkperLeelllkntpvvplrryketnlvedgedvlviisqdwnglnagsflirnsewsklllDlwadpllrekkkavtesdeqsaleyl 189
                      l+e +++pe+L ++ l+n+ v+pl+  ++t+ ++d edv++i+++d+ng++ +sfl++n++++++llD w++pl+++ k +    +e+sal++l
       EPX74140.1 147 LKEAIMNPEQLASSYLRNHAVDPLKPRIRTRNKMDLEDVKLITTNDYNGISVRSFLLKNDDFATFLLDSWNEPLFKTFKSE---LAERSALSHL 237
                      *****************************************************************************9999...9********* PP

  Glyco_transf_34 190 lekhpevlskvglveqkvinsydegekelgykegdlvvhfagCkvankc 238
                      le hp+++++v+lv +kv+nsy++++ +l+y+egd++v +  C++ ++c
       EPX74140.1 238 LEIHPTIMNHVALVFPKVLNSYTDSAVDLNYQEGDFLV-LSNCENGASC 285
                      ************************************98.8999999888 PP

>> Cohesin_HEAT  HEAT repeat associated with sister chromatid cohesion
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.2    0.0022        20       3      23 ..      59      79 ..      58      81 .. 0.87
   2 ?    4.3   0.0    0.0056        51       2      17 ..     233     248 ..     233     264 .. 0.80

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0022
                  HHHHHHH-GGGGGSHHHHHHH CS
  Cohesin_HEAT  3 lsslvekdpsiLsapevldti 23
                  + +lv  +++i ++p++ld +
    EPX74140.1 59 ILMLVLSNDQISDNPKFLDKL 79
                  5689*************9976 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.0056
                   HHHHHHHH-GGGGGSH CS
  Cohesin_HEAT   2 alsslvekdpsiLsap 17 
                   als+l+e++p+i+ + 
    EPX74140.1 233 ALSHLLEIHPTIMNHV 248
                   79**********9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (308 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       691  (0.0385409); expected 358.6 (0.02)
Passed bias filter:                      547  (0.0305092); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.29s 00:00:00.79 Elapsed: 00:00:00.55
# Mc/sec: 1689.36
//
Query:       EPX74141.1  [L=301]
Description: DUF171 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-51  176.0   0.0    1.5e-51  175.6   0.0    1.0  1  Methyltrn_RNA_3  Putative RNA methyltransferase


Domain annotation for each model (and alignments):
>> Methyltrn_RNA_3  Putative RNA methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.6   0.0   8.3e-56   1.5e-51       1     233 [.       8     254 ..       8     262 .. 0.91

  Alignments for each domain:
  == domain 1  score: 175.6 bits;  conditional E-value: 8.3e-56
  Methyltrn_RNA_3   1 tvsiaiPssiisnaqsleqktylagqIARaaaiFnVdeivvfddseseeekkek..........pseflarlLqYletPpYLrkelFplhkelk 84 
                      t+siaiP s++++a++l++k++l++qIAR a +++Vdeiv+  d+e+ +++++           p +f++ +L+Y+etP ++rk++Fpl ++lk
       EPX74141.1   8 TISIAIPVSCLNEANNLQLKSALVYQIARLAIVYEVDEIVLVADPEHVRQTQNAtassdcyvrdPLKFFSDILSYMETPTFMRKTIFPLLPHLK 101
                      79*******************************************9988777669*************************************** PP

  Methyltrn_RNA_3  85 yaglLppldaphhl.rsse.egeyreGvvvekskekkskkklVniGlkkevklelkqevpegtRVtVkl.....sseesveakvVspsepreea 171
                      ++gl+p +++     +  + + +y+e  v+++ +++k+k  +V+ G +++v++ ++q + ++ R tV+l     ++e + ++++Vs ++pre+ 
       EPX74141.1 102 HMGLFPVIQLRNDSsQILDkDFPYKEAYVLNQLPRSKNK-YVVHAGFQHPVQVTSTQPLAAKDRLTVRLkpqapNTEGYLQGDIVSCTAPREKG 194
                      *********888774334459***********9988774.49*******************************9999***************** PP

  Methyltrn_RNA_3 172 glywGYsVrlakslsavftespfeggydlsig.tsergekveeklaelekkkefkhllivfGg 233
                      g ywG+++r  +sls++++  p++ggydl++  +  ++ + ++  ++l  +++f+h+l++fG+
       EPX74141.1 195 GRYWGFQIRHSTSLSDLLKG-PYKGGYDLKVQiNNSTHVSPADLSNNL--RSSFRHVLLLFGN 254
                      ******************98.7*********96544444566666666..447*********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (301 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       297  (0.0165653); expected 358.6 (0.02)
Passed bias filter:                      289  (0.0161191); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.28s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 2169.99
//
Query:       EPX74142.1  [L=371]
Description: lipoic acid synthetase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.5e-30  104.0   0.1    4.2e-29  101.1   0.1    2.1  2  LIAS_N       N-terminal domain of lipoyl synthase of Radical_
    5.1e-16   59.5   0.0    8.2e-16   58.8   0.0    1.3  1  Radical_SAM  Radical SAM superfamily


Domain annotation for each model (and alignments):
>> LIAS_N  N-terminal domain of lipoyl synthase of Radical_SAM family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.1   0.1   4.7e-33   4.2e-29      28     108 .]      24     106 ..       5     106 .. 0.90
   2 ?    0.2   0.0      0.11     1e+03      59     102 ..     250     296 ..     228     297 .. 0.65

  Alignments for each domain:
  == domain 1  score: 101.1 bits;  conditional E-value: 4.7e-33
      LIAS_N  28 ltdekkelleeGPdlqDFvsgdkedk.seweeykgnlkrekge.rlrLPswlktkiPlGknynkikndlreLnLhtvCeeaRC 108
                   d++ e+l++GP++ DF++ +k+   +e++e++ +++ ++g  + rLPswlktk+PlG n++kikndlr+LnLhtvCeea+C
  EPX74142.1  24 YSDKFSERLANGPSFADFINSEKPLSgEEAYELDRKVELPNGTvHKRLPSWLKTKVPLGSNFTKIKNDLRGLNLHTVCEEAKC 106
                 468899**************999877699**************977************************************* PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.11
      LIAS_N  59 ykgnlkrekgerlrLPswl.ktkiPl..GknynkikndlreLnLhtv 102
                 y++ l+  ++ +  +P  + kt+i l  G+  + +  +lr+L+ h v
  EPX74142.1 250 YRQSLSVLEQAKKSVPHLItKTSIMLglGETDEEVIRTLRDLRAHGV 296
                 44444444344445666533888865116778889999999998876 PP

>> Radical_SAM  Radical SAM superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.8   0.0   9.2e-20   8.2e-16       5     167 .]     130     291 ..     126     291 .. 0.88

  Alignments for each domain:
  == domain 1  score: 58.8 bits;  conditional E-value: 9.2e-20
                  SEESS--TTTSCCTTHHHHHHHHHHHHHHHHHHHHHHH.HHTTSEEEEEESSTGGGSTTHHHHHHHHHHTC..CCTEEEEEEECSSCHGHHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxx RF
  Radical_SAM   5 rgCnlrCsfCarpetvrregrgrslsveeileevkelk.aekgvkevilgggepllypdfvellerlakla..vpgiritvetngtlpdeeklerlle 99 
                    C+++C+fC++++     +r+  l++ e ++ ++++  ++ g  +++++  + l++     +++ +  ++   p i +   t+ +  + + ++  ++
   EPX74142.1 130 DTCTRGCRFCSVKT----SRRPPPLDPNEPEKTADAINrWNLGYVVLTSVDRDDLADLGANHIAKTIGSIKqkAPHILVEALTPDFSGRLDLVDVVAK 223
                  67***********5....8******************9888888888888888888888888888888887556666666666666666********* PP

                  TT-SEEEEEEBSSSHHHHHHHHT.CTSHHHHHHHHHHHHHHTTSET..EEEEEEEBTTTSHHHHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxx RF
  Radical_SAM 100 lgvdrvslgleaaddekvlklmn.rghtfeevlealeklreagikr..vvdrivglpGendeeleellell 167
                   g+d++++++e++ d    ++++ r+ t+ + l +le ++++ ++   +++ i+++ Ge+dee+  +l++l
   EPX74142.1 224 SGLDVFAHNVETVED--LTRYVRdRRATYRQSLSVLEQAKKS-VPHliTKTSIMLGLGETDEEVIRTLRDL 291
                  ***************..6788888******************.**********************999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (371 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       538  (0.0300073); expected 358.6 (0.02)
Passed bias filter:                      495  (0.0276089); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.44
# Mc/sec: 2528.62
//
Query:       EPX74143.1  [L=445]
Description: box H/ACA snoRNP assembly protein Shq1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-61  206.3   0.3    3.7e-61  205.7   0.3    1.2  1  SHQ1      SHQ1 protein
  ------ inclusion threshold ------
      0.041   12.2   0.0       0.06   11.7   0.0    1.1  1  DUF5312   Family of unknown function (DUF5312)


Domain annotation for each model (and alignments):
>> SHQ1  SHQ1 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  205.7   0.3   4.1e-65   3.7e-61       4     173 ..     250     418 ..     248     421 .. 0.96

  Alignments for each domain:
  == domain 1  score: 205.7 bits;  conditional E-value: 4.1e-65
        SHQ1   4 pvefteeekeklkkLpkkeyllskeekkellltlvdiLfayaYdqretegeknvESawtigkLspqlsfldef.sslkevviasvrRsltYPlyRnfeL 101
                 ++efte+ek++l +Lp+k+y++  e+ k+++l+lv ++fayaYd+r+t g+ ++ES+w+ig ++p++++ld++ s++++v  a++rR+l+YPlyRn++L
  EPX74143.1 250 SFEFTENEKQNLLSLPRKSYII--ENPKRIYLNLVALIFAYAYDHRTTLGDPSSESGWNIGIMAPNVACLDTNfSTIHDVACACFRRALAYPLYRNWNL 346
                 589******************9..7**********************************************955************************* PP

        SHQ1 102 aekvlkdvykiLrggkrlvlkcLldikelfrehdvyyvlnklyldDycvwiqsakeevlrslaeelkkvkvk 173
                 +e+++kd++ iL++gkr++l++Ll ik+lf++hdvyy++n+++++Dy++wiq+a+++vl++l+ ++ +   k
  EPX74143.1 347 VETCWKDTHAILSLGKRWILRVLLGIKSLFEHHDVYYIYNTMIINDYAYWIQTANDNVLEALTYQVMEYMPK 418
                 ***************************************************************999887655 PP

>> DUF5312  Family of unknown function (DUF5312)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   6.7e-06      0.06      57     100 ..     363     406 ..     349     415 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 6.7e-06
     DUF5312  57 pllfrlwlfikslfkslsvellyeeellkrlgkkierkapglid 100
                  +++r++l ikslf+   v  +y++ ++++ +  i+ ++ + ++
  EPX74143.1 363 RWILRVLLGIKSLFEHHDVYYIYNTMIINDYAYWIQTANDNVLE 406
                 69******************************999988777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (445 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       381  (0.0212505); expected 358.6 (0.02)
Passed bias filter:                      299  (0.0166769); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 3368.22
//
Query:       EPX74144.1  [L=310]
Description: SNARE Sed5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.7e-09   36.4   1.1    7.9e-09   35.4   0.1    2.1  2  SNARE            SNARE domain
    9.4e-06   24.7   0.3    9.4e-06   24.7   0.3    2.4  2  Syntaxin-5_N     Syntaxin-5 N-terminal, Sly1p-binding domain
    0.00012   22.5   6.3     0.0018   18.8   1.2    2.7  2  Syntaxin-6_N     Syntaxin 6, N-terminal
    0.00014   22.0   1.3    0.00014   22.0   1.3    2.8  3  Syntaxin-18_N    SNARE-complex protein Syntaxin-18 N-terminus
      0.005   16.5  14.3      0.022   14.4   0.1    2.9  3  Syntaxin         Syntaxin
  ------ inclusion threshold ------
      0.028   14.1   0.1      0.078   12.6   0.1    1.7  1  DUF4807          Domain of unknown function (DUF4807)
      0.033   14.4  11.5       0.51   10.5   5.1    2.7  2  COG5             Golgi transport complex subunit 5
      0.039   13.7   5.5        0.6    9.8   0.1    2.4  2  EDR1             Ethylene-responsive protein kinase Le-CTR1
       0.15   12.7   2.5        7.6    7.2   0.2    3.2  2  SlyX             SlyX
        0.4   11.1   4.7        1.2    9.6   0.1    3.5  3  FlaC_arch        Flagella accessory protein C (FlaC)
       0.69   10.0   8.6        4.3    7.4   0.7    3.1  3  DUF1664          Protein of unknown function (DUF1664)
       0.75   10.1   3.2        1.7    9.0   0.4    2.1  2  HutP             HutP
        1.9    8.7   4.7       0.54   10.4   0.3    2.4  2  TRPM_tetra       Tetramerisation domain of TRPM
        4.4    7.9  10.8        1.1    9.8   0.2    3.0  2  DUF16            Protein of unknown function DUF16


Domain annotation for each model (and alignments):
>> SNARE  SNARE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1       3.7   4.8e+03       4      34 ..      82     112 ..      81     116 .. 0.62
   2 !   35.4   0.1   6.1e-12   7.9e-09       1      53 []     255     307 ..     255     307 .. 0.98

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 3.7
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTX CS
       SNARE   4 DrIdtnVenaqsnveraqkeLkkavkyqksn 34 
                 +++ +++ ++ s +++    L++ v++ ++ 
  EPX74144.1  82 QELTYHIKQSLSSLNSDIASLQQIVRQTSKG 112
                 5666777777776666666667666666665 PP

  == domain 2  score: 35.4 bits;  conditional E-value: 6.1e-12
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTXXXXXXXXXXXXXXXXXXXX CS
       SNARE   1 emvDrIdtnVenaqsnveraqkeLkkavkyqksnRklkciillilviillvvl 53 
                 e v+rId   +++ sn+ +aq+e+ k+  + +snR l+++ ++il++++l+++
  EPX74144.1 255 ETVQRIDLYTDDIASNIGSAQREILKFYDRVSSNRALLFKVFGILIVFFLLWV 307
                 789***********************************************997 PP

>> Syntaxin-5_N  Syntaxin-5 N-terminal, Sly1p-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.3   7.4e-09   9.4e-06       4      18 ..       1      15 [.       1      16 [. 0.95
   2 ?   -3.9   0.2       6.8   8.7e+03      14      19 ..     103     108 ..     103     108 .. 0.87

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 7.4e-09
  Syntaxin-5_N  4 mSirDRTsEFqSivk 18
                  mS++DRT+EFq++v+
    EPX74144.1  1 MSFQDRTTEFQACVA 15
                  9************96 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 6.8
  Syntaxin-5_N  14 qSivks 19 
                   q+iv++
    EPX74144.1 103 QQIVRQ 108
                   89*987 PP

>> Syntaxin-6_N  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   1.2   1.4e-06    0.0018       3      86 ..      43     125 ..      42     137 .. 0.82
   2 ?    5.8   0.1     0.016        21       8      64 ..     230     285 ..     204     296 .. 0.79

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 1.4e-06
  Syntaxin-6_N   3 FfevkeeVqkslnkaeslyrrwerlledtss..stseeldetrteLrkalrsiewdledLeetvriveknpskfkidekelsrrra 86 
                   F  v++++  ++n++ + ++r ++l + ++   ++  e++e++  ++++l+s++ d+  L++ vr  +k     + ++++++++++
    EPX74144.1  43 FTTVAKKIAYKINETGKHLQRLSQLAKRKTLfdDRPVEIQELTYHIKQSLSSLNSDIASLQQIVRQTSK---GSRNKPAQINQHNE 125
                   8899*******************9988877676699****************************44433...35555666666554 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.016
  Syntaxin-6_N   8 eeVqkslnkaeslyrrwerlledtssstseeldetrteLrkalrsiewdledLeetv 64 
                   e ++++++++ +++++  ++ +++++ t + +d  ++++ ++++s++ ++  + + v
    EPX74144.1 230 ESIESTISELGGIFSQLAQMVSEQRE-TVQRIDLYTDDIASNIGSAQREILKFYDRV 285
                   56788888888888888887777766.478888899999999998888887777766 PP

>> Syntaxin-18_N  SNARE-complex protein Syntaxin-18 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   1.3   1.1e-07   0.00014       2      57 ..       5      56 ..       4      66 .. 0.80
   2 ?   -1.4   0.1       2.3   2.9e+03      57      64 ..     101     108 ..      83     127 .. 0.50
   3 ?   -1.0   0.2       1.6   2.1e+03       2      30 ..     137     159 ..     136     180 .. 0.56

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 1.1e-07
  Syntaxin-18_N  2 DiTplFkasVktvkasssskseekeakkrkkkrlkkskekdeFikeAkeilkhItk 57
                   D+T +F+a+V+  +a  +   +  ++  + ++ l+ +++k+eF++ Ak+i+ +I++
     EPX74144.1  5 DRTTEFQACVANTRA--RMRIS--SSNATMNNALQAKHQKSEFTTVAKKIAYKINE 56
                   9************54..33333..3445578899999*****************97 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 2.3
  Syntaxin-18_N  57 kLrkfLle 64 
                    +L+++ ++
     EPX74144.1 101 SLQQIVRQ 108
                    33332222 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 1.6
  Syntaxin-18_N   2 DiTplFkasVktvkasssskseekeakkr 30 
                    D +  Fk+++++    ++ k++    ++r
     EPX74144.1 137 DTSMNFKDILEVRT--QNMKAS----QNR 159
                    55667888887772..122222....111 PP

>> Syntaxin  Syntaxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.8     0.045        58      25      75 ..      23      71 ..       9      78 .. 0.79
   2 !    5.7   6.6    0.0083        11       7     121 ..      46     156 ..      40     172 .. 0.70
   3 !   14.4   0.1   1.7e-05     0.022     168     199 ..     220     253 ..     202     254 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.045
    Syntaxin 25 lkkqneesktstraksvklkkrmesdikeikkraesvkarLeaLdksnken 75
                ++++n ++ ++ +ak+   k+++ + +k+i  + ++  ++L++L++ +k++
  EPX74144.1 23 ISSSNATMNNALQAKHQ--KSEFTTVAKKIAYKINETGKHLQRLSQLAKRK 71
                55556666665555555..99999999999999999999999999987765 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0083
    Syntaxin   7 eveeikkeiekleeevkklkkqneesktstraksvklkkrmesdikeikkraesvkarLeaLdksnkenekks.gegsavdRirksqtaaLrkklkevm 104
                  +++i  +i++  +++++l++  ++ kt  +   v    ++++++ +ik++  s+++ + +L++ ++++ k s ++ + ++  ++ ++ +L++ l ++ 
  EPX74144.1  46 VAKKIAYKINETGKHLQRLSQLAKR-KTLFDDRPV----EIQELTYHIKQSLSSLNSDIASLQQIVRQTSKGSrNKPAQINQHNENIVVSLQNSLADTS 139
                 4555666666666666666655544.344444444....567778888888888888888888888888877766666677888888999999999999 PP

    Syntaxin 105 teynelrekireeyker 121
                 ++++++ e  ++++k  
  EPX74144.1 140 MNFKDILEVRTQNMKAS 156
                 99999998888888876 PP

  == domain 3  score: 14.4 bits;  conditional E-value: 1.7e-05
    Syntaxin 168 i..eeRhkevlelekslkeLhqlFldmavLVEeQ 199
                 +  ++R   + ++e+ + eL  +F ++a +V eQ
  EPX74144.1 220 VysQQRMSSIESIESTISELGGIFSQLAQMVSEQ 253
                 3559****************************99 PP

>> DUF4807  Domain of unknown function (DUF4807)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   6.1e-05     0.078      18      65 ..     226     273 ..     211     278 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 6.1e-05
     DUF4807  18 rieleeamawLstLggafsaLgdkfeeaaevAgkislqQlklAlklgd 65 
                 +  +e++ +++s Lgg fs L++  +e+ e++++i l    +A ++g+
  EPX74144.1 226 MSSIESIESTISELGGIFSQLAQMVSEQRETVQRIDLYTDDIASNIGS 273
                 56789999******************************9999999997 PP

>> COG5  Golgi transport complex subunit 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   5.1    0.0004      0.51      15     100 ..      27     111 ..      24     125 .. 0.79
   2 ?    7.1   0.1    0.0044       5.6      56     104 ..     209     259 ..     203     290 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.0004
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-TTHHHHH CS
        COG5  15 nallkatnnnddteldlstplkrlnydiqeldkrlrqlit.snhleLlehlskskslssvlselksslesLsasyerlkskvlepye 100
                 na + ++ +++ +++   t +k++ y i+e  k+l++l + ++ ++L++  ++  + ++++  +k+sl+sL++ +  l++ v +  +
  EPX74144.1  27 NATMNNALQAKHQKSEFTTVAKKIAYKINETGKHLQRLSQlAKRKTLFD--DRPVEIQELTYHIKQSLSSLNSDIASLQQIVRQTSK 111
                 55556666688899999*******************9987256666666..45667888*******************998877655 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0044
                 XXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXX-TTHHHHHHHHH CS
        COG5  56 nhleLlehlskskslss..vlselksslesLsasyerlkskvlepyeeaek 104
                 ++  Lle+ ++  s +   + ++++s +++L   +++l + v+e  e ++ 
  EPX74144.1 209 EQMALLENQTDVYSQQRmsSIESIESTISELGGIFSQLAQMVSEQRETVQR 259
                 5667888888877777656889***********************999876 PP

>> EDR1  Ethylene-responsive protein kinase Le-CTR1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   2.4     0.016        20      68     129 ..      75     136 ..      10     159 .. 0.78
   2 ?    9.8   0.1   0.00047       0.6      80     153 ..     224     296 ..     141     298 .. 0.74

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.016
        EDR1  68 DseLkeleqtavklvselnstkelvkklAelVadvmggsvskeeelllrweessselkasln 129
                 D +  e++++++++ ++l+s ++ + +l ++V +  +gs +k  ++++++e+ + +l++sl 
  EPX74144.1  75 DDRPVEIQELTYHIKQSLSSLNSDIASLQQIVRQTSKGSRNKPAQINQHNENIVVSLQNSLA 136
                 666667888888899999999999999*************9999999999999999998876 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00047
        EDR1  80 klvselnstkelvkklAelVadvmggsvskeeelllrweessselkaslnsvvlplGslkiGlcrhRAlLFKvL 153
                 + +s+++s ++ + +l+++  +++ + vs++ e ++r    + ++ ++++s    + +    ++ +RAlLFKv 
  EPX74144.1 224 QRMSSIESIESTISELGGIF-SQLAQMVSEQRETVQRIDLYTDDIASNIGSAQREILKFYDRVSSNRALLFKVF 296
                 33444445577777777754.456667777788888888888888888888888888889999*********95 PP

>> SlyX  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.1     0.057        73       3      38 ..      76     111 ..      74     139 .. 0.82
   2 ?    7.2   0.2     0.006       7.6       4      42 ..     228     266 ..     223     280 .. 0.83

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.057
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        SlyX   3 erleeLEiklafqedtieeLndvvaeqqqqidrlqr 38 
                 +r +e+++   +  + + +Ln  +a  qq + +  +
  EPX74144.1  76 DRPVEIQELTYHIKQSLSSLNSDIASLQQIVRQTSK 111
                 677888999999999999999999999998887665 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.006
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        SlyX   4 rleeLEiklafqedtieeLndvvaeqqqqidrlqrqlrl 42 
                  +e +E+ ++ +     +L ++v eq+++++r+    + 
  EPX74144.1 228 SIESIESTISELGGIFSQLAQMVSEQRETVQRIDLYTDD 266
                 58999***********************99998765555 PP

>> FlaC_arch  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.1      0.46   5.9e+02      19      38 ..      88     107 ..      82     111 .. 0.63
   2 ?   -1.8   0.1       3.3   4.3e+03       5      22 ..     131     151 ..     124     160 .. 0.61
   3 ?    9.6   0.1   0.00094       1.2       3      49 ..     230     287 ..     223     289 .. 0.70

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.46
   FlaC_arch  19 vkkeneelsksveelkenVk 38 
                 +k+++++l++++  l++ V+
  EPX74144.1  88 IKQSLSSLNSDIASLQQIVR 107
                 45555666666666665554 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 3.3
   FlaC_arch   5 lEnklsklst...eletvkke 22 
                 l+n l ++s+    +  v+++
  EPX74144.1 131 LQNSLADTSMnfkDILEVRTQ 151
                 666666666644444444444 PP

  == domain 3  score: 9.6 bits;  conditional E-value: 0.00094
   FlaC_arch   3 delEnklsklst.......eletvkkeneelsksveelkenV....kdllsLYEvVsn 49 
                 +++E+ +s+l         +++  +++ + +    +++  n+    +++l+ Y+ Vs 
  EPX74144.1 230 ESIESTISELGGifsqlaqMVSEQRETVQRIDLYTDDIASNIgsaqREILKFYDRVSS 287
                 666666666666444333366666666666666666777777**************95 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.7    0.0034       4.3      51     112 ..      48     108 ..      24     113 .. 0.73
   2 ?   -0.5   0.1      0.94   1.2e+03      59      77 ..     141     159 ..     109     177 .. 0.54
   3 ?    6.3   0.2    0.0075       9.6      81     121 ..     221     261 ..     205     287 .. 0.67

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0034
     DUF1664  51 eqvseslaatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeaveg 112
                 +++  ++++t +hL +r+ ++ k+     +   ei+e   ++++ ls++++d+ s++++v++
  EPX74144.1  48 KKIAYKINETGKHL-QRLSQLAKRKTLFDDRPVEIQELTYHIKQSLSSLNSDIASLQQIVRQ 108
                 45556777777777.57777777777777777778887788888888888888888888775 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.94
     DUF1664  59 atkrhLssridrvdkklde 77 
                 + k+ L+ r +++ ++++ 
  EPX74144.1 141 NFKDILEVRTQNMKASQNR 159
                 2233344444444444443 PP

  == domain 3  score: 6.3 bits;  conditional E-value: 0.0075
     DUF1664  81 iskeikeevtevredlseigedvesvkeaveglesklerie 121
                  s++  + ++++++ +se+g  ++++ ++v++  ++++ri+
  EPX74144.1 221 YSQQRMSSIESIESTISELGGIFSQLAQMVSEQRETVQRID 261
                 34445556666667777777777777777766666666654 PP

>> HutP  HutP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.4    0.0013       1.7       6      89 ..      21     102 ..      16     114 .. 0.86
   2 ?    1.2   0.1      0.33   4.2e+02       8      50 ..     211     253 ..     210     259 .. 0.76

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.0013
                 HHHHH-SSSCH.HHHH.HHHHTTEEEEEEEEEESS...HHHHHHHHHHHHHHTTSS-SSSHHHHHHHHHHHHHHHHHHTTSHHS CS
        HutP   6 illalsesreeeeelkeklkkegikvaavevggeaeelskkivesavvaAkregvikeehreehavahAvleAlsqvtrkavgl 89 
                 ++++ s +  +++ l++k +k++++++a +++ +  + + k ++++   Akr+ + ++++ e + ++  +++ ls+++++ ++l
  EPX74144.1  21 MRISSS-NATMNNALQAKHQKSEFTTVAKKIAYKI-NETGKHLQRLSQLAKRKTLFDDRPVEIQELTYHIKQSLSSLNSDIASL 102
                 455555.66677999999*************9888.779999******************************999998877665 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.33
                 HHH-SSSCH.HHHH.HHHHT.TEEEEEEEEEESS...HHHHHHH CS
        HutP   8 lalsesreeeeelkeklkke.gikvaavevggeaeelskkives 50 
                 +al  +++++ + ++++ +   i++++ e+gg +++l + + e+
  EPX74144.1 211 MALL-ENQTDVYSQQRMSSIeSIESTISELGGIFSQLAQMVSEQ 253
                 7888.55565666766666559************9999988776 PP

>> TRPM_tetra  Tetramerisation domain of TRPM
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.3   0.00042      0.54      20      49 ..      80     109 ..      79     112 .. 0.91
   2 ?   -3.0   0.0       6.4   8.2e+03      30      45 ..     227     242 ..     224     251 .. 0.64

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00042
  TRPM_tetra  20 evneKenlikaSLqsldfrLgkLedlsalt 49 
                 e++e    ik+SL+sl + ++ L+ +  +t
  EPX74144.1  80 EIQELTYHIKQSLSSLNSDIASLQQIVRQT 109
                 78888889*******************999 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 6.4
  TRPM_tetra  30 aSLqsldfrLgkLedl 45 
                 +S+ s+++ ++ L  +
  EPX74144.1 227 SSIESIESTISELGGI 242
                 4677777777666555 PP

>> DUF16  Protein of unknown function DUF16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   5.8       1.3   1.6e+03      58      89 ..      75     106 ..      22     172 .. 0.61
   2 ?    9.8   0.2   0.00085       1.1      24      72 ..     217     265 ..     204     285 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 1.3
                 HHHHHHHHHHHHHHHHHHH.......HHHHHH CS
       DUF16  58 ekqgekikelkveqkaqgeelnkvdetlelil 89 
                 +    +i+el+ ++k+   +ln+   +l+ i+
  EPX74144.1  75 DDRPVEIQELTYHIKQSLSSLNSDIASLQQIV 106
                 33334444444444444444443333333333 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00085
                 HHHHB-..BHHHHHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHHHHH CS
       DUF16  24 qlnefkdsnkqrLkkieakvdklgeqinkleqkvekqgekikelkveqk 72 
                 q + + ++    ++ ie +++ lg  +++l+q v++q e ++++    +
  EPX74144.1 217 QTDVYSQQRMSSIESIESTISELGGIFSQLAQMVSEQRETVQRIDLYTD 265
                 455588899999999*************************998766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1935  (0.107926); expected 358.6 (0.02)
Passed bias filter:                      567  (0.0316247); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                        20  (0.00111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.63u 0.30s 00:00:00.93 Elapsed: 00:00:00.44
# Mc/sec: 2096.49
//
Query:       EPX74145.1  [L=291]
Description: DNA binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.5e-71  239.9   2.1    2.8e-71  239.7   2.1    1.0  1  Transcrip_reg  Transcriptional regulator
  ------ inclusion threshold ------
      0.027   13.7   0.1      0.049   12.9   0.1    1.4  1  DUF4138        Domain of unknown function (DUF4138)
       0.12   12.6   0.2        3.6    7.9   0.0    2.9  3  DUF4777        Domain of unknown function (DUF4777)


Domain annotation for each model (and alignments):
>> Transcrip_reg  Transcriptional regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  239.7   2.1   4.8e-75   2.8e-71       1     239 [.      33     280 ..      33     281 .. 0.93

  Alignments for each domain:
  == domain 1  score: 239.7 bits;  conditional E-value: 4.8e-75
                    .XCHHCCCCCCHCCCCHHHHHHHHHHHHHHHHHTHH-S-GGG-HHHHHHHHHHHHTT--HHHHHHHHHHCCSTS.TS..--EEEEEEEEETTTEEE CS
  Transcrip_reg   1 skWsnikhkKaandakkgklftklakeItvaakeeggpDpesNprLraaiekakkanvpkdnIeraIkkgagekseg.anyeevtyegygpggvav 95 
                    +kWs+ikhkK and++++k + k+++ It+ a++  g++p+ N+rL++++e+a+k+++pk++Ie aIk+g+g+++++ + ++++ yeg+ p+gv++
     EPX74145.1  33 NKWSKIKHKKSANDQARSKQVGKISQSITMTART-EGTNPDVNIRLATLLEQARKNSIPKSVIETAIKRGSGGGAADgNIMQTLDYEGMHPSGVGF 127
                    8********************************7.888**********************************9777735588888*********** PP

                    EEEEEES-HHHHHHHHHHHHHHTT-EEE-TTSSGGGEEEEEEEEEECCH..CT-HHHHHHHHHHHHTESEEEEE.......TTTC.EEEEEEGGGH CS
  Transcrip_reg  96 ivealTdnknrtaaevrsifsknggnlgesgsvsflFerkgvivveeke..eevdedelleaaieaGaeDveed.......eeeevievitepedl 182
                    ive+ Tdn++rtaa+v++i++k+g++l   ++ +flF++ g ++v++++   +++  ++l++aieaGaeD+ +        e+e++++++tep++l
     EPX74145.1 128 IVETITDNRARTAANVKHILKKHGASL---SNAKFLFTKAGKVEVNPPAdrLSMELGNVLDDAIEAGAEDIVQRpeeyideEDEGQFVILTEPASL 220
                    ***************************...999************998888889999***************9999999754466*********** PP

                    HHHHHHHHHTTT---SEEEEEEEESS-EE-....-HHHHHHHHHHHHHHHTSTTEEEEEES CS
  Transcrip_reg 183 aavkkaLeeagglevesaeleyipkeevel....deeeaekleklidaLeeldDVqnvytN 239
                    ++v++ ++++  +e++++++ y+p +++ +    +e+++e++++l+d+L +++DV  ++t 
     EPX74145.1 221 NEVAQYFRSQ-KYEIKDSRMIYVPISDTAIdlqsNEQAKEQIQNLLDELYDIEDVMYIHTS 280
                    *******999.578**********8888776674478899****************99985 PP

>> DUF4138  Domain of unknown function (DUF4138)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   8.2e-06     0.049     115     154 ..     246     284 ..     202     289 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 8.2e-06
     DUF4138 115 kkkkrkikhikskkfgiklevkgiYihndllyfhlaleNk 154
                 +  + ++++ ++ k +i+  +  +Y ++d++y+h++  N+
  EPX74145.1 246 DT-AIDLQSNEQAKEQIQNLLDELYDIEDVMYIHTSAINS 284
                 33.36788899999*********************99887 PP

>> DUF4777  Domain of unknown function (DUF4777)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.31   1.9e+03      25      42 ..     128     145 ..     122     149 .. 0.84
   2 ?    7.9   0.0    0.0006       3.6      16      38 ..     214     237 ..     211     240 .. 0.82
   3 ?    0.0   0.0      0.17     1e+03      36      50 ..     253     267 ..     249     267 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.31
     DUF4777  25 ivervaerydlseeelkk 42 
                 ive++++++++    +k+
  EPX74145.1 128 IVETITDNRARTAANVKH 145
                 899999999998888876 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0006
     DUF4777  16 lnrPaTldEiverv.aerydlsee 38 
                 l +Pa+l E+++++ +++y+ +++
  EPX74145.1 214 LTEPASLNEVAQYFrSQKYEIKDS 237
                 579***********8888877665 PP

  == domain 3  score: 0.0 bits;  conditional E-value: 0.17
     DUF4777  36 seeelkkvVkntLea 50 
                 s e++k++++n+L++
  EPX74145.1 253 SNEQAKEQIQNLLDE 267
                 6799********985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (291 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       986  (0.0549947); expected 358.6 (0.02)
Passed bias filter:                      590  (0.0329076); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2178.98
//
Query:       EPX74146.1  [L=123]
Description: hypothetical protein SOCG_03359 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0022   18.1   0.0     0.0036   17.5   0.0    1.4  1  DUF5388   Family of unknown function (DUF5388)
  ------ inclusion threshold ------
      0.052   14.3   0.1      0.081   13.7   0.1    1.4  1  DUF4472   Domain of unknown function (DUF4472)


Domain annotation for each model (and alignments):
>> DUF5388  Family of unknown function (DUF5388)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0     4e-07    0.0036      27      66 ..      15      55 ..       9      59 .. 0.85

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 4e-07
     DUF5388 27 aiGlaksqkeavkklveslidsLsesdkk.rfkkqleiLEe 66
                  G  +  k++v++++e + d+L+e+++k  f+ ++++L +
  EPX74146.1 15 VAGFHQKSKKLVDHALEVYNDRLPEDQEKfSFDSFVDVLDT 55
                56889999***************99865548********86 PP

>> DUF4472  Domain of unknown function (DUF4472)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1     9e-06     0.081       9      46 ..      22      61 ..      20      98 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 9e-06
     DUF4472  9 sKeLVd..lqietnklreqheaekfelknkvlalenrvle 46
                sK+LVd  l++ +++l e +e+ +f+   +vl  e+ v++
  EPX74146.1 22 SKKLVDhaLEVYNDRLPEDQEKFSFDSFVDVLDTESAVVN 61
                9*****4445559***********************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       673  (0.037537); expected 358.6 (0.02)
Passed bias filter:                      502  (0.0279993); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 958.64
//
Query:       EPX74147.1  [L=510]
Description: type I ribosomal protein arginine N- methyltransferase Rmt3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-12   47.4   0.1      4e-12   46.1   0.1    1.6  1  PrmA             Ribosomal protein L11 methyltransferase (Prm
    1.7e-12   47.9   0.0    6.5e-12   46.0   0.0    2.1  1  Methyltransf_25  Methyltransferase domain
    5.3e-11   42.5   0.6    3.3e-10   40.0   0.0    2.2  2  Methyltransf_31  Methyltransferase domain
    2.9e-10   40.7   1.0    1.3e-09   38.6   0.0    2.5  2  Methyltransf_11  Methyltransferase domain
      5e-08   32.9   0.0    2.3e-07   30.8   0.0    2.1  2  Methyltransf_23  Methyltransferase domain
    6.1e-07   29.1   0.0    1.2e-06   28.2   0.0    1.4  1  MTS              Methyltransferase small domain
    9.7e-06   25.6   0.0    2.2e-05   24.4   0.0    1.6  1  Methyltransf_18  Methyltransferase domain
    4.7e-05   23.7   1.3    0.00011   22.5   1.3    1.5  1  zf-C2H2_2        C2H2 type zinc-finger (2 copies)
    0.00027   20.3   0.0    0.00042   19.7   0.0    1.2  1  CMAS             Mycolic acid cyclopropane synthetase
    0.00027   20.7   0.0    0.00055   19.7   0.0    1.5  1  Methyltransf_16  Lysine methyltransferase
    0.00078   20.1   0.2     0.0023   18.6   0.2    1.8  1  zf-C2H2_3rep     Zinc finger C2H2-type, 3 repeats
    0.00093   19.3   0.0     0.0018   18.4   0.0    1.5  1  FtsJ             FtsJ-like methyltransferase
    0.00094   18.5   0.0     0.0017   17.7   0.0    1.3  1  Methyltransf_2   O-methyltransferase domain
    0.00095   18.6   0.0     0.0019   17.6   0.0    1.5  1  Ubie_methyltran  ubiE/COQ5 methyltransferase family
     0.0014   18.4   0.1     0.0025   17.6   0.1    1.3  1  Met_10           Met-10+ like-protein
     0.0016   19.1   0.0     0.0047   17.6   0.0    1.9  1  Methyltransf_12  Methyltransferase domain
     0.0035   16.3   0.0     0.0048   15.9   0.0    1.3  1  Methyltransf_9   Protein of unknown function (DUF1698)
     0.0041   16.8   0.2     0.0095   15.6   0.0    1.6  1  UPF0020          Putative RNA methylase family UPF0020
     0.0055   16.7   0.2      0.014   15.4   0.0    1.7  2  Methyltransf_32  Methyltransferase domain
  ------ inclusion threshold ------
      0.011   15.6   0.0      0.017   15.0   0.0    1.4  1  PRMT5            PRMT5 arginine-N-methyltransferase
      0.011   15.1   0.0      0.032   13.6   0.0    1.8  1  TehB             Tellurite resistance protein TehB
      0.015   14.9   0.2      0.045   13.3   0.0    1.9  2  Methyltransf_15  RNA cap guanine-N2 methyltransferase
      0.025   14.9   0.8      0.067   13.5   0.8    1.7  1  zf-Di19          Drought induced 19 protein (Di19), zinc-bind
      0.026   15.3   3.1       0.11   13.4   3.1    2.1  1  zf-C2H2_4        C2H2-type zinc finger
        0.1   12.3   0.0       0.17   11.6   0.0    1.3  1  PCMT             Protein-L-isoaspartate(D-aspartate) O-methyl
       0.18   11.4   0.2       0.36   10.4   0.0    1.6  1  Cons_hypoth95    Conserved hypothetical protein 95
       0.27   11.3   1.1       0.64   10.1   1.1    1.6  1  zf-C2H2_6        C2H2-type zinc finger


Domain annotation for each model (and alignments):
>> PrmA  Ribosomal protein L11 methyltransferase (PrmA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.1   0.1     6e-15     4e-12     161     233 ..     222     296 ..     214     328 .. 0.82

  Alignments for each domain:
  == domain 1  score: 46.1 bits;  conditional E-value: 6e-15
        PrmA 161 egeevlDvGtGSGiLaiaaakLgakkvvavDiDevAvkvakeNaelNkveaklevalseellk....eekadvivaN 233
                 +g++vlDvG+G+GiL++  ak ga++v+avD  ++ +++a+ Na  N++++k++  + +++ +      k+d+iv+ 
  EPX74147.1 222 KGKTVLDVGCGTGILSMFCAKAGAAQVYAVDNSDI-IQMARTNAYENNLADKITF-IRGKIEEiqipVPKVDIIVSE 296
                 689*****************************998.9**************9966.333332222345889**9986 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.0   0.0   9.8e-15   6.5e-12       1      76 [.     226     302 ..     226     323 .. 0.83

  Alignments for each domain:
  == domain 1  score: 46.0 bits;  conditional E-value: 9.8e-15
                      EEEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTT..TEEEEESBCCGBSSSTTTEEEEEEEST.GGG CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeegl..nvefvqgdaedlpfedgsfDlvvssga.lhh 76 
                      vLd+GcGtG l++ +ak+ g+a+v++vD s + ++ ar++a e++l  +++f++g++e+++ +  ++D++vs  + + +
       EPX74147.1 226 VLDVGCGTGILSMFCAKA-GAAQVYAVDNS-DIIQMARTNAYENNLadKITFIRGKIEEIQIPVPKVDIIVSEWMgYAL 302
                      9*****************.69*******87.799*******999999*************************5443444 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.2      0.88   5.8e+02      63     127 ..      11     120 ..       7     156 .. 0.49
   2 !   40.0   0.0     5e-13   3.3e-10       3      81 ..     222     296 ..     220     354 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.88
  Methyltransf_31  63 iee.lekl.ledekfDlilsnevl..........................naladpdkile...............eiervlkpggilliedpr 113
                      +e+ +e+   ed  f  +++++v+                            ++d+ k ++               +++ vl ++ ++++  p+
       EPX74147.1  11 WENeAEEVwEEDLEFTCLFCKDVFtsldslwshckqvhdfdfksvkkdhhLEFYDCIKLINyirsqvskeqpvdykNLSTVLASDEYMISVLPD 104
                      5554555544556666666665554444333332222222222222332223333333333555555555566666777777777777777777 PP

  Methyltransf_31 114 ..llaelp....akveeesk 127
                        +    +    + +e++s+
       EPX74147.1 105 daV----LfslgETLESDSE 120
                      332....2234355555555 PP

  == domain 2  score: 40.0 bits;  conditional E-value: 5e-13
  Methyltransf_31   3 kglrvlDlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaqklgld.nveFeqgdieeleklledekfDlilsn 81 
                      kg++vlD+GCGtG l+   a ++g  a+v+ +D+s + i+ Ar+na +++l   ++F +g iee++  +   k+D+i+s 
       EPX74147.1 222 KGKTVLDVGCGTGILSMFCA-KAG-AAQVYAVDNS-DIIQMARTNAYENNLAdKITFIRGKIEEIQ--IPVPKVDIIVSE 296
                      799*****************.776.5*******87.79********9999988***********99..77779****997 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       4.8   3.2e+03      38      81 ..     134     181 ..     108     183 .. 0.60
   2 !   38.6   0.0   1.9e-12   1.3e-09       1      93 [.     227     324 ..     227     326 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 4.8
                      CCHHT-.........EEEETTEECCCTSS-TT-EEEEEEES-CCC-CCHHHHH CS
  Methyltransf_11  38 aseegl.........kvefvvadaeklpfednsfDlvvssevlhhvedpekal 81 
                      +s             +v+++   +e+  +++++ D  +s+ +   +++p k+l
       EPX74147.1 134 SS---KeeelkslrlQVKLLSTQMEE--IRKEKLDDLTSQTANSSLQEPGKVL 181
                      22...122345554466666666665..7888888888888888888888777 PP

  == domain 2  score: 38.6 bits;  conditional E-value: 1.9e-12
                      EEET-TTSHHHHHHHHTT.SEEEEEES-HHHHHHHHHHCCHHT-..EEEETTEECCCTSS-TT-EEEEEEES...-CCC-CCHHHHHHHHHHHE CS
  Methyltransf_11   1 LdvGcGtGrlaealakrg.arvvgvDlskemlklakekaseegl..kvefvvadaeklpfednsfDlvvsse...vlhhvedpekalkeiaRvL 88 
                      LdvGcGtG+l+  +ak+g a+v++vD +   +++a+++a e++l  k++f+++ +e+++++  ++D++vs +   +l++    +++l    R L
       EPX74147.1 227 LDVGCGTGILSMFCAKAGaAQVYAVD-NSDIIQMARTNAYENNLadKITFIRGKIEEIQIPVPKVDIIVSEWmgyALTFESMIDSVLIARDRFL 319
                      8*************************.677899********999**************99999*******995555555567777777777777 PP

                      EEEEE CS
  Methyltransf_11  89 kpgGl 93 
                        +Gl
       EPX74147.1 320 AEDGL 324
                      77776 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0         4   2.6e+03      82     122 ..      63     105 ..      16     146 .. 0.64
   2 !   30.8   0.0   3.5e-10   2.3e-07      18      98 ..     218     399 ..     203     431 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 4
  Methyltransf_23  82 kfdlIvlrevlehvpd..ppellrqiatllkpgGylllsepla 122
                       +d+I l++++ +  +   p   +++ t l+ + y++   p+ 
       EPX74147.1  63 FYDCIKLINYIRSQVSkeQPVDYKNLSTVLASDEYMISVLPDD 105
                      5666666666666654335566666666666666666666543 PP

  == domain 2  score: 30.8 bits;  conditional E-value: 3.5e-10
  Methyltransf_23  18 pklraggrvLdiGcGtGillevlrengf.svtgvDlspeaveiae................................................. 61 
                      ++l++g+ vLd+GcGtGil+  +++ g+ +v++vD s++ +++a+                                                 
       EPX74147.1 218 KNLFKGKTVLDVGCGTGILSMFCAKAGAaQVYAVDNSDI-IQMARtnayennladkitfirgkieeiqipvpkvdiivsewmgyaltfesmids 310
                      4589**********************999*******987.777777888888888887777777777777777777777777777777777777 PP

  Methyltransf_23  62 ..............................................kakkaqkdqfdeqeaae......pqgkfdlIvlrevlehvpdp 98 
                                                                    k  ++++ +f++ + ++      +++ f++++ ++ ++ v+d+
       EPX74147.1 311 vliardrflaedglmapsetrlvlsattnseileepldfwsdvygfKMNCMKDASFNRVNVDVipasyiSAEPFEFATINMHTCKVKDV 399
                      77777777777777777777777777777777777777777777666666666666555444465566666688888888888888875 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.2   0.0   1.8e-09   1.2e-06      31     103 ..     222     295 ..     213     296 .. 0.78

  Alignments for each domain:
  == domain 1  score: 28.2 bits;  conditional E-value: 1.8e-09
                 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC..EEEEE-STTT.TSTTS-EEEEEE CS
         MTS  31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle..vevvasdvle.eveekkfdlivs 103
                 + ++vlD+GcG+G+l++ +ak+    +v +vd++   +++a++n+ +n+l+  ++++   + e +++  k+d+ivs
  EPX74147.1 222 KGKTVLDVGCGTGILSMFCAKAGAA-QVYAVDNS-DIIQMARTNAYENNLAdkITFIRGKIEEiQIPVPKVDIIVS 295
                 4678****************97766.89999976.67***********9997766666665543344567777775 PP

>> Methyltransf_18  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.0   3.4e-08   2.2e-05      14      97 ..     222     304 ..     217     347 .. 0.84

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 3.4e-08
  Methyltransf_18  14 kgsrvaDiGtDHgylpiylvkegkakkviasDinegplekakeniekagledkievrlsdGleklk.eee.vdtvviaGmGgelil 97 
                      kg++v+D+G+  g+l+++ +k g a +v+a+D  +  ++ a++n+ +++l dki+++ ++ +e+++ +   vd++v   mG  l  
       EPX74147.1 222 KGKTVLDVGCGTGILSMFCAKAGAA-QVYAVDN-SDIIQMARTNAYENNLADKITFIRGK-IEEIQiPVPkVDIIVSEWMGYALTF 304
                      6899****************98876.9*****6.5799******************9998.5666645544999999999987754 PP

>> zf-C2H2_2  C2H2 type zinc-finger (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   1.3   1.6e-07   0.00011       2      49 ..      27      79 ..      25      84 .. 0.88

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 1.6e-07
   zf-C2H2_2  2 Clfcekkskeveellehmskkhgffip...ereylv..dleglleylrekiee 49
                Clfc++ ++++++l +h ++ h+f+++   ++++l   d  +l++y+r+++++
  EPX74147.1 27 CLFCKDVFTSLDSLWSHCKQVHDFDFKsvkKDHHLEfyDCIKLINYIRSQVSK 79
                *************************9977655556566************987 PP

>> CMAS  Mycolic acid cyclopropane synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   6.3e-07   0.00042      51     144 ..     211     306 ..     195     342 .. 0.78

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 6.3e-07
                 HHHHHTTTT--TT-EEEEES-TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHTS-SSS-EEEEES-GGG---...--SEEEEES-GGGTSGGG CS
        CMAS  51 ldlileklelkpGmtlLdiGcGWGslvrraverydvkvvglTlSkeqaklakkrvdeldlerkvevklldyedlde...kvdrvvsvgafehvgken 144
                 +d i+e  +l +G+t+Ld+GcG G l +  ++   ++v ++  S+   ++a+ +  e +l++k +    + e+++    kvd +vs  +  ++ +e+
  EPX74147.1 211 RDFIYENKNLFKGKTVLDVGCGTGILSMFCAKAGAAQVYAVDNSD-IIQMARTNAYENNLADKITFIRGKIEEIQIpvpKVDIIVSEWMGYALTFES 306
                 57899999*************************889999998775.677888888888999999888888888887666778888866665655554 PP

>> Methyltransf_16  Lysine methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   8.3e-07   0.00055      40     102 ..     216     275 ..     185     312 .. 0.82

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 8.3e-07
  Methyltransf_16  40 lganelsklsvlELGsGtGlvGlavaellpeakviltDleellellkknielnknalkskvkv 102
                       ++n +++++vl++G GtG+  +  a++ + a+v+  D ++++++ ++n   n+  l++k+++
       EPX74147.1 216 ENKNLFKGKTVLDVGCGTGILSMFCAKA-GAAQVYAVDNSDIIQMARTNAYENN--LADKITF 275
                      56778899******************99.9*******************99977..8888876 PP

>> zf-C2H2_3rep  Zinc finger C2H2-type, 3 repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.2   3.5e-06    0.0023      31      68 ..      23      60 ..      11      99 .. 0.82

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 3.5e-06
  zf-C2H2_3rep 31 lllqcipcgshfgnaeelwlhvlsvhpsdfklskvaqk 68
                  l + c+ c+  f++ + lw+h  +vh  dfk+ k +++
    EPX74147.1 23 LEFTCLFCKDVFTSLDSLWSHCKQVHDFDFKSVKKDHH 60
                  5578***************************9998775 PP

>> FtsJ  FtsJ-like methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   2.7e-06    0.0018      16      93 ..     218     295 ..     212     365 .. 0.72

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 2.7e-06
                 HT-S-TT-EEEECT-TTSHHHHHHCCT.T.-SEEEEEESSSSHHHTTEEEECS-CCCSSHHHHHCHCHHH.....SSEEEEEE CS
        FtsJ  16 fklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpmaplpgvttiqgditdpetiekikealse.....rkvdlvvs 93 
                  +lf +gktv+D+g+++G  s ++++  ga ++v+avD   + ++ + + ++ +  d+ t   i+  ++e      kvd++vs
  EPX74147.1 218 KNLF-KGKTVLDVGCGTGILSMFCAKA-GA-AQVYAVDNSDIIQMARTNAYENNLADKIT--FIRGKIEEiqipvPKVDIIVS 295
                 4556.89********************.88.9*******999555555555555444422..222222222233345555555 PP

>> Methyltransf_2  O-methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   2.6e-06    0.0017      59     135 ..     219     297 ..     202     307 .. 0.84

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 2.6e-06
                     -GGG-SEEEEET-TTSHHHHHHHHH-TT-EEEEEE-HHHHHHHHHHS.-----TTEEEEES-TTTS---..--SEEEEES CS
  Methyltransf_2  59 dleglkslvDvGGGtGalakaivsayPtikvivfDlpeVveaAkehl.sageeervefvgGdffkdslP..eaDaillkr 135
                     +l + k+++DvG GtG l   +++a    +v   D +++++ A++   + +++++++f+ G + + ++P  + D+i+ ++
      EPX74147.1 219 NLFKGKTVLDVGCGTGILSMFCAKA-GAAQVYAVDNSDIIQMARTNAyENNLADKITFIRGKIEEIQIPvpKVDIIVSEW 297
                     46666899********998888877.688999************987799************987665544999988766 PP

>> Ubie_methyltran  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   2.9e-06    0.0019      35     120 ..     210     293 ..     195     352 .. 0.82

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 2.9e-06
                      HHHHHHHH--S--TTEEEEES-TT-HHHHHHHHHHHHHHEEEEEES-HHHHHHHHHHHHHHTSS.TEEEEE--TTT-TTS-T-EEEE CS
  Ubie_methyltran  35 WkkfveklvavkrgakvlDvagGtgDlafklsdsvgekgkvvvlDinenmLkvgekklkeegki.nieflqanaeeLpfeddsfDvv 120
                      +++f+ + ++  +g++vlDv +Gtg l++  +++ g   +v  +D n++++++++  + e+    +i f+ ++ ee++      D++
       EPX74147.1 210 YRDFIYENKNLFKGKTVLDVGCGTGILSMFCAKA-G-AAQVYAVD-NSDIIQMARTNAYENNLAdKITFIRGKIEEIQIPVPKVDII 293
                      799**********************988766654.3.34788888.778999***99999988879*******99998887777776 PP

>> Met_10  Met-10+ like-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.1   3.7e-06    0.0025      98     183 ..     220     304 ..     192     318 .. 0.76

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 3.7e-06
                 --TT-EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG---.TT-EEEEEE--TTTGGGG CS
      Met_10  98 veegevVvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkvekvvkpileDgrevir.eqladrvvmnlpksaieF 183
                   +g++V+dv  G G +++ +ak + a +v+a+d n + +++ + n   N+++++++ i +  +e+     ++d +v + + +a  F
  EPX74147.1 220 LFKGKTVLDVGCGTGILSMFCAK-AGAAQVYAVD-NSDIIQMARTNAYENNLADKITFIRGKIEEIQIpVPKVDIIVSEWMGYALTF 304
                 5589*******************.66777*****.899**********************999999765778888886666666555 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   7.1e-06    0.0047       1      71 [.     227     294 ..     227     325 .. 0.72

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 7.1e-06
  Methyltransf_12   1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvelealdlldldgg.ssfDlvv 71 
                      L++GcGtG l++ ++++   +++++vD s        ++++++enn ++++++    +++ + +  ++D++v
       EPX74147.1 227 LDVGCGTGILSMFCAKA-GAAQVYAVDNSDIIQ---MARTNAYENNLADKITFIRGKIEEIQIPvPKVDIIV 294
                      8*************999.999999***998655...667777777777777777777665554466888887 PP

>> Methyltransf_9  Protein of unknown function (DUF1698)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   7.3e-06    0.0048     113     209 ..     220     318 ..     122     342 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 7.3e-06
                     --TT-EEEEET-TTSHHHHHHHHCT-SEEEEE---HHH.HHHHHHHHCCTTTTSSEEEE---GGGS-T.---EEEEEE..ES-GGG-S-HHHHHH CS
  Methyltransf_9 113 dlkgrtildvGcgnGyhlwrmvgegaklvvGidPself.liqfeavrkllgedqrahllplgieqlpe.leafdtvfs..mGvlyhrrsPldhll 203
                      +kg+t+ldvGcg+G   +  + +ga++v  +d s +  +   +a ++ l+   + + +   ie+++  +   d++ s  mG     +s +d +l
      EPX74147.1 220 LFKGKTVLDVGCGTGILSMFCAKAGAAQVYAVDNSDIIqMARTNAYENNLA--DKITFIRGKIEEIQIpVPKVDIIVSewMGYALTFESMIDSVL 312
                     479*************9999999**********998651344555555553..334445557888876677778777655777777777777777 PP

                     HHHCTE CS
  Methyltransf_9 204 qlkdql 209
                       +d +
      EPX74147.1 313 IARDRF 318
                     666654 PP

>> UPF0020  Putative RNA methylase family UPF0020
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   1.4e-05    0.0095      76     128 ..     245     296 ..     209     304 .. 0.91

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 1.4e-05
                 H--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--GGG--STTS---EEEE- CS
     UPF0020  76 elklygsDldrrvvqgareNaekagvgdliefsqadaakLrlkegevdvivtn 128
                  +++y++D+ + ++q ar+Na + +++d+i+f   ++ +++ +  +vd+iv++
  EPX74147.1 245 AAQVYAVDN-SDIIQMARTNAYENNLADKITFIRGKIEEIQIPVPKVDIIVSE 296
                 567999996.68*****************************88889*****96 PP

>> Methyltransf_32  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.2       6.4   4.2e+03      55      95 ..     126     163 ..     111     184 .. 0.50
   2 !   15.4   0.0   2.1e-05     0.014      25      94 ..     222     285 ..     210     345 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 6.4
  Methyltransf_32  55 vgidakeelvekaekraeklgkkfnkrlsfaelsieeatss 95 
                      v++d k++ +++ e    +l+  + k ls++  +i++++ +
       EPX74147.1 126 VAVDNKNNSSKEEELKSLRLQ--V-KLLSTQMEEIRKEKLD 163
                      445554444444444444444..4.4444444444444433 PP

  == domain 2  score: 15.4 bits;  conditional E-value: 2.1e-05
  Methyltransf_32  25 galtvvDvGaGkgYLsfvlalkekeyklkvvgidakeelvekaekraeklgkkfnkrlsfaelsieeats 94 
                      + +tv+DvG+G g Ls   a        +v+++d +++ ++ a++ a + +  +++++ f+ ++iee++ 
       EPX74147.1 222 KGKTVLDVGCGTGILSMFCAK---AGAAQVYAVD-NSDIIQMARTNAYENN--LADKITFIRGKIEEIQI 285
                      5689****************9...7799******.5677888887777777..78999999999998865 PP

>> PRMT5  PRMT5 arginine-N-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.0   2.6e-05     0.017      27     147 ..     185     299 ..     146     325 .. 0.70

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 2.6e-05
                 HHHHHHHCC-CCHHHHHHHHHHHHHHHHCTCCGTCC.-EEEEEEES-TTSHHHHHHHHHHHHHCCCEEEEEEEES-HHHHHHHHHHHHHHTTCCGCEEE CS
       PRMT5  27 satYevFEkdkvKYelYeeAiekalsdlkkekkkksekklvilvvGaGRGplvdralkaleetkvtkvkivavEKnpnavvtLqkkvneekWeekvevi 125
                 s  +e +  + + + + ++A+++        ++k+  k  ++l vG G G l     ka         +++av+  +  + + +++  e++ ++k++ i
  EPX74147.1 185 SYYFESYAGNDIHFVMLSDAVRTEGYRDFIYENKNLFKGKTVLDVGCGTGILSMFCAKA------GAAQVYAVDNSD-IIQMARTNAYENNLADKITFI 276
                 45556666667777777777765544444444444446677888899998775433222......24689***8555.555555555788899****** PP

                 ES-CCCCCHCC.-ECEEEE---B CS
       PRMT5 126 ksdmrelkaee.kvdllvsELLG 147
                 +  + e++++  kvd++vsE +G
  EPX74147.1 277 RGKIEEIQIPVpKVDIIVSEWMG 299
                 **********99*********99 PP

>> TehB  Tellurite resistance protein TehB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   4.8e-05     0.032      27     101 ..     219     295 ..     203     315 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 4.8e-05
                 CCS-S-EEEEES-TTSHHHHHHHHTT-.EEEEEES-HHHHHHHHHHHHHTT-.TTEEEEE--GGG----.S-EEEEEE CS
        TehB  27 kivkpgkvldlgcgqgrnslylsllgy.dvtawdknensiafleeikekenl.knistalydineakld.erydfils 101
                 ++ k   vld+gcg g  s++ +  g  +v a+d n++ i++ +  +  +nl ++i+    +i+e+++   + d+i+s
  EPX74147.1 219 NLFKGKTVLDVGCGTGILSMFCAKAGAaQVYAVD-NSDIIQMARTNAYENNLaDKITFIRGKIEEIQIPvPKVDIIVS 295
                 55666779***************99962677887.5555665555555556624465566677777775245666666 PP

>> Methyltransf_15  RNA cap guanine-N2 methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       2.1   1.4e+03      39      60 ..      58      79 ..      42     143 .. 0.70
   2 ?   13.3   0.0   6.8e-05     0.045       2      61 ..     224     293 ..     223     398 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 2.1
  Methyltransf_15 39 qhNaevYgvsdkitlvlgdvfe 60
                      h  e+Y+  + i ++  +v +
       EPX74147.1 58 DHHLEFYDCIKLINYIRSQVSK 79
                     4567777777777777777665 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 6.8e-05
  Methyltransf_15   2 rvilDlfsGaGGnviqfalv.fekviaieinleklacaqhNaevYgvsdkitlvlgdvfe..........l 61 
                      +++lD+ +G+G  ++  a+    +v+a++   + +++a  Na   + +dkit++ g+++e          +
       EPX74147.1 224 KTVLDVGCGTGILSMFCAKAgAAQVYAVDN-SDIIQMARTNAYENNLADKITFIRGKIEEiqipvpkvdiI 293
                      579********9999999985679****95.5789**********************99955555555550 PP

>> zf-Di19  Drought induced 19 protein (Di19), zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.8    0.0001     0.067       2      32 ..      24      55 ..      23      56 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 0.0001
     zf-Di19  2 sftCPyCgk.eltvkeLveHvedeHrveskev 32
                +ftC +C++   + ++L++H+++ H ++ k+v
  EPX74147.1 24 EFTCLFCKDvFTSLDSLWSHCKQVHDFDFKSV 55
                7********557789**********9998876 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   3.1   0.00016      0.11       1      24 []      25      48 ..      25      48 .. 0.98

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 0.00016
   zf-C2H2_4  1 fkCpiCgksFsskkaLlrHlkthH 24
                f+C +C+ +F+s ++L +H+k++H
  EPX74147.1 25 FTCLFCKDVFTSLDSLWSHCKQVH 48
                89********************99 PP

>> PCMT  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00026      0.17      70     116 ..     219     263 ..     199     280 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00026
                 T--TT-EEEEES-TTSHHHHHHHHHHCTTCEEEEEESBHHHHHHHHH CS
        PCMT  70 elkkgarvLevGsGsGyltavlarlvgekgrvvsierikelveeakr 116
                 +l kg+ vL+vG+G+G+l+   a+   ++  v +++ +  ++ + ++
  EPX74147.1 219 NLFKGKTVLDVGCGTGILSMFCAKAGAAQ--VYAVDNSDIIQMARTN 263
                 5889*************998877754433..4566665544444444 PP

>> Cons_hypoth95  Conserved hypothetical protein 95
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00054      0.36      40      96 ..     221     276 ..     203     295 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00054
                    HCC-EEEETT-TTSHHHHHHHHTT-SEEEEEES-HHHHHHHHHHHCCCT--TTTEEE CS
  Cons_hypoth95  40 iegarvLDlfaGsGalglEAlSRgakkavlvekdkeavkilkenleelkleeetael 96 
                    ++g++vLD+ +G+G l++ ++  ga+++++v++++  +++ ++n  e +l ++++ +
     EPX74147.1 221 FKGKTVLDVGCGTGILSMFCAKAGAAQVYAVDNSD-IIQMARTNAYENNLADKITFI 276
                    7899****************************875.567788888877777655444 PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   1.1   0.00096      0.64       2      25 ..      25      48 ..      25      49 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00096
   zf-C2H2_6  2 heCsvCsksFpslqaLggHkksHr 25
                + C  C+ +F sl++L  H k+ +
  EPX74147.1 25 FTCLFCKDVFTSLDSLWSHCKQVH 48
                66888**************99976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (510 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1002  (0.0558871); expected 358.6 (0.02)
Passed bias filter:                      610  (0.0340231); expected 358.6 (0.02)
Passed Vit filter:                        75  (0.00418317); expected 17.9 (0.001)
Passed Fwd filter:                        27  (0.00150594); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              27  [number of targets reported over threshold]
# CPU time: 0.60u 0.26s 00:00:00.86 Elapsed: 00:00:00.40
# Mc/sec: 3800.28
//
Query:       EPX74148.1  [L=121]
Description: U2 snRNP-associated protein Msl1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      1e-08   34.8   0.1    1.2e-08   34.6   0.1    1.1  1  RRM_5         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
    5.4e-08   32.5   0.6    1.2e-07   31.4   0.6    1.6  1  RRM_1         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
    0.00018   21.3   0.1    0.00026   20.8   0.1    1.3  1  RRM_occluded  Occluded RNA-recognition motif
     0.0011   18.8   0.2     0.0014   18.5   0.2    1.1  1  Calcipressin  Calcipressin
  ------ inclusion threshold ------
      0.013   15.6   0.1      0.021   14.9   0.1    1.3  1  Limkain-b1    Limkain b1


Domain annotation for each model (and alignments):
>> RRM_5  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.6   0.1   3.4e-12   1.2e-08      29     105 ..       6      87 ..       2     103 .. 0.81

  Alignments for each domain:
  == domain 1  score: 34.6 bits;  conditional E-value: 3.4e-12
       RRM_5  29 llVyglepdkvnld...klFnlfclYgnvervkflktkk..etalvqmgdasaveravqHLnnaklfgkrlevalSKqqavs 105
                 l V +l+ +    d   +l+ lf+ Yg v  +  lkt+k  ++a +   dasa+  a++ L+n++ fgk++++ + K q+  
  EPX74148.1   6 LYVNNLNDKINKNDlkvSLYVLFSTYGTVVDIIALKTQKmrGQAHIVFYDASAAAIAMKALKNTQFFGKEMRIDFAKTQSKM 87 
                 5677777544333333479*****************9865599**********************************99744 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4   0.6   3.5e-11   1.2e-07       1      70 []       6      77 ..       6      77 .. 0.88

  Alignments for each domain:
  == domain 1  score: 31.4 bits;  conditional E-value: 3.5e-11
                EEEESETTTSSHHHHH....HHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1  1 lfVgnLppdvteeeLk....elFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrelk 70
                l+V+nL+  +++++Lk     lFs +G +  ++++  +t+k +g a + F + ++A+ A++al ++++ g+e++
  EPX74148.1  6 LYVNNLNDKINKNDLKvslyVLFSTYGTV--VDIIALKTQKMRGQAHIVFYDASAAAIAMKALKNTQFFGKEMR 77
                8************976333379*******..66666669*******************************9975 PP

>> RRM_occluded  Occluded RNA-recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.1   7.3e-08   0.00026       2      70 ..       4      78 ..       3      87 .. 0.78

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 7.3e-08
  RRM_occluded  2 rtisllplsDtvnkarira....lveekegeikkiv.L..vpdheGAivefkdekiagkasLaLdgsefegkklrc 70
                  +t+ + +l+D++nk+ ++     l++++ g +++i+ L  +   + A ++f d+++a+ a+ aL++++f gk++r+
    EPX74148.1  4 NTLYVNNLNDKINKNDLKVslyvLFSTY-GTVVDIIaLktQKMRGQAHIVFYDASAAAIAMKALKNTQFFGKEMRI 78
                  689999********98875222255666.77777662311344567*************************99986 PP

>> Calcipressin  Calcipressin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.2   3.8e-07    0.0014       4      73 ..      15      85 ..      12      91 .. 0.82

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 3.8e-07
  Calcipressin  4 vvdadnlellralieqtdeilawsllksFr...RiivvfsseeaaaavrsqldwekeeilGkklrlYfaqptt 73
                  + ++d++  l  l+++++  +  + lk  +    + +vf +  aaa ++++l+  ++++ Gk++r+ fa+++ 
    EPX74148.1 15 INKNDLKVSLYVLFSTYGTVVDIIALKTQKmrgQAHIVFYDASAAAIAMKALK--NTQFFGKEMRIDFAKTQS 85
                  56677788888899999988877777765432379****************99..8************98875 PP

>> Limkain-b1  Limkain b1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.1   5.9e-06     0.021       5      77 ..       6      82 ..       3      90 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 5.9e-06
  Limkain-b1  5 lvvsnLPtnrdklkkaiknrLrrLsdncGGkvlsisgks......avlrfanqeaaeralkrleneDvfGnritvsekp 77
                l+v+nL  + +  k+ +k  L  L+   G  v  i  k+      a + f +  aa  a+k l n   fG+ + + +  
  EPX74148.1  6 LYVNNLNDKIN--KNDLKVSLYVLFSTYGTVVDIIALKTqkmrgqAHIVFYDASAAAIAMKALKNTQFFGKEMRIDFAK 82
                79999965555..999999999999988888877754442222228888**********************99988764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       652  (0.0363657); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 839.79
//
Query:       EPX74149.1  [L=674]
Description: transcription factor tfiiic complex subunit sfc9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.6e-15   56.9   6.3      5e-15   55.3   6.3    1.9  1  zf-TFIIIC     Putative zinc-finger of transcription factor II
    6.4e-15   55.6   0.5    6.4e-15   55.6   0.5    3.1  3  TFIIIC_delta  Transcription factor IIIC subunit delta N-term
  ------ inclusion threshold ------
      0.061   13.5   2.6       0.16   12.2   2.6    1.7  1  PHF5          PHF5-like protein


Domain annotation for each model (and alignments):
>> zf-TFIIIC  Putative zinc-finger of transcription factor IIIC complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.3   6.3   8.4e-19     5e-15      11     100 ..     590     671 ..     574     672 .. 0.86

  Alignments for each domain:
  == domain 1  score: 55.3 bits;  conditional E-value: 8.4e-19
   zf-TFIIIC  11 kesCdicdagipleslteaqckeGHvfsRCaltflaiqepkiskvCilcstevldeelveaqelikeeseksllriLleavdtciycggk 100
                 +e+C++c+++i++++ + a+c++GHv++RC++t+l++ +   + +C++c++ ++d   ++ q+         ++++++e +  c +cgg+
  EPX74149.1 590 EEVCPACKSHIEFTNEAIATCNKGHVWQRCSITMLILHQRTAR-YCSICKSVTVDWGSLNIQS-------ACFTKEVQEELGICYFCGGH 671
                 89*********************************99998866.*****98888777766654.......667799************97 PP

>> TFIIIC_delta  Transcription factor IIIC subunit delta N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.6   0.5   1.1e-18   6.4e-15       2     149 ..      11     131 ..      10     147 .. 0.86
   2 ?   -1.2   0.6      0.28   1.7e+03      97     136 ..     140     181 ..     131     207 .. 0.71
   3 ?   -0.5   0.4      0.17     1e+03      96      96 ..     252     252 ..     197     379 .. 0.62

  Alignments for each domain:
  == domain 1  score: 55.6 bits;  conditional E-value: 1.1e-18
  TFIIIC_delta   2 pstldalaWSeDgqlavatgesiyiLepklplqklklnrsgiqaseatkqavklranvfsededpnwsqaseenysigeeqsslisldtkinaqsqv 98 
                   ps+   +++S+Dg+la ++g  ++iL+p   +          ++++       ++  ++ e+ d n+++ s ++  ig+   +           ++ 
    EPX74149.1  11 PSSFPSCECSSDGKLAFCNGGRVQILTPSHEI----------NTPK------YIKSLAILENYDENERMYSPKDLRIGDLILN-----------HTA 80 
                   78888899*********************999..........2222......234445888999999*************999...........9** PP

  TFIIIC_delta  99 vaaaWSPlgLsknrrClLavLtttgeLsiyeasgnkekssWtrvlnlnell 149
                   +++aWSP+g s+n  ClLavLt+ ++++iy+++ +  + +W  v+ +n+ l
    EPX74149.1  81 RQVAWSPTGISENYGCLLAVLTNRYQVYIYSSTSKILHMNWKCVCHINSFL 131
                   *******************************99999*****9999888744 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.28
  TFIIIC_delta  97 qvvaaaWSP....lgLsknrrClLavLtttgeLsiyeasgnkek 136
                   ++  +aWS+    ++Ls  + ClL++   +g++ ++  + ++++
    EPX74149.1 140 RIHVLAWSSllslPRLSPWGICLLGLGAEDGNVHVM--CVHRNS 181
                   567788888433347888888999988888888777..334444 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.17
  TFIIIC_delta  96 s 96 
                   s
    EPX74149.1 252 S 252
                   3 PP

>> PHF5  PHF5-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   2.6   2.7e-05      0.16      25      79 ..     588     641 ..     578     656 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2.7e-05
        PHF5  25 kcdgkcpicdslvkpatkvricdecsfgkleekciicgs.kgvsdayyclecvrle 79 
                   +  cp c s+++ ++++     c+ g+  ++c i      +++a yc+ c  + 
  EPX74149.1 588 AFEEVCPACKSHIEFTNEA--IATCNKGHVWQRCSITMLiLHQRTARYCSICKSVT 641
                 66889********998875..578**********9999878888********8765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (674 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       781  (0.0435607); expected 358.6 (0.02)
Passed bias filter:                      476  (0.0265492); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.27s 00:00:00.92 Elapsed: 00:00:00.44
# Mc/sec: 4588.62
//
Query:       EPX74150.1  [L=1064]
Description: cytoplasmic isoleucine-tRNA ligase Irs1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   6.7e-223  741.3   0.0   1.1e-222  740.6   0.0    1.3  1  tRNA-synt_1   tRNA synthetases class I (I, L, M and V)
    1.6e-27   96.3   0.1    3.9e-27   95.1   0.1    1.6  1  Anticodon_1   Anticodon-binding domain of tRNA
    1.6e-14   53.5   1.3    0.00047   19.0   0.1    4.1  3  tRNA-synt_1g  tRNA synthetases class I (M)
  ------ inclusion threshold ------
      0.014   14.8   0.0      0.029   13.7   0.0    1.5  1  tRNA-synt_1e  tRNA synthetases class I (C) catalytic domain


Domain annotation for each model (and alignments):
>> tRNA-synt_1  tRNA synthetases class I (I, L, M and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  740.6   0.0  2.4e-226  1.1e-222       2     600 ..      12     634 ..      11     636 .. 0.98

  Alignments for each domain:
  == domain 1  score: 740.6 bits;  conditional E-value: 2.4e-226
  tRNA-synt_1   2 lyekWeeedvfkkelekekekkefilvdgPPyvtGslHiGhalaktlkdivirykrmkGkevlyvpGwDhaGlaieakvekklgakekkerkklgree 99 
                  ++++W e d+f+++l+ ++ ++ef+++dgPP++tG +H Gh la+t+kd v+ry+ +kG++v++++GwD++Gl++e++++kklg+++ ++++k+g ++
   EPX74150.1  12 VLAFWREIDAFRTQLKLSEGRPEFTFFDGPPFATGLPHHGHLLASTIKDSVTRYACLKGYHVERRFGWDTHGLPVEHEIDKKLGITRSEDVMKIGIDK 109
                  789*********************************************************************************************** PP

  tRNA-synt_1 100 frekvrewkaeyaeeirkqvkrlGvsvDfdreylTldkeleeavkevfvrladkgliyrgkklvnwstklktalselEv..eykdkkdalihvafpla 195
                  +++++r+++++ya+e+r +v+rlG+++Dfd++y+Tl+++++e++++vf++l++k+ +yrg +++++st+++t+ls++E+  +yk++ d+++ vaf+l 
   EPX74150.1 110 YNAECRNIVMTYASEWRATVERLGRWIDFDNDYKTLYPSFMESIWWVFKELFKKDKVYRGFRVMPYSTACTTPLSNFEAqqNYKEVPDPAVVVAFELV 207
                  *******************************************************************************999**************** PP

  tRNA-synt_1 196 dkeevklviaTTtPeTllgdtavavnpeldyv.....itkeklilaeallkslvkke.sek.kiledergkeLegkevelpl.......vnrkipiia 279
                  ++ ev + ++TTtP+Tl++++a+avnp l+y       +++k+i+ ea l +l+k+  + + +ile+++g++L+g+++++++       ++r+++i  
   EPX74150.1 208 NDPEVGVLAWTTTPWTLPSNLALAVNPKLEYLkildkESNKKYIIQEACLGTLYKNPkKASfEILERFNGSKLNGLKYKPLFpyfaseyQERAFVIYG 305
                  *******************************9999988899**************9954447**************************9999999999 PP

  tRNA-synt_1 280 ddyvdkeaGtGvVkiaPahdedDyevgkkynl.....evinildedgtlteeaaefeglkvfdarkkvveelkekglllkaekiehsvpfcerskkpi 372
                   dyv++ +GtG+V++aPa++e Dy ++  +++     + ++++de+g++te +++f g++v+da+k ++++lk++g l+++++i hs+pfc+rs++p+
   EPX74150.1 306 ADYVEEGSGTGIVHQAPAFGEADYDAAWANGIidadhPAPCPIDEKGCYTEAISDFVGQYVKDADKEIIRTLKNRGSLVRHSQIFHSYPFCWRSDTPL 403
                  9**********************************9999*********************************************************** PP

  tRNA-synt_1 373 iyrateqWfvrvkeladaalkavekvqfvpks.kekryaswleniqdWciSRqrwWGhriplfvsketeevvvreelkelvagreeeeaekkalekea 469
                  +yr +++Wfv+vk ++d+++++v+k+++vp+  ++kr+a+wl n++dW+iSR+r+WG++ipl+ s++ ee+++  ++kel++      + +k+l+++ 
   EPX74150.1 404 LYRTVPSWFVKVKGITDQMVDNVMKTHWVPQNiRDKRFANWLSNARDWNISRNRYWGTPIPLWASDDYEEIICIGSVKELEE--LSGVTGIKDLHRDN 499
                  *******************************999*********************************************999..88999999****** PP

  tRNA-synt_1 470 kdkl....kkekgelekdedvlDvWFsSgswpfstlgypeedteelkkffpadmlleGlDiirgWvarlillslaltgsePfkevlvhglvrdeeGrK 563
                  +d++    k++kg+l+++++v+D+WF+Sgs+p+s+ +yp+e+ + + + fpad+++eG+D++rgW+++l +l++ l g +P+k+v+v+glv++e+G+K
   EPX74150.1 500 IDHItipsKQGKGTLHRVSEVFDCWFESGSMPYSSRHYPFENGDTFMNGFPADFISEGVDQTRGWFYTLTVLGTLLHGVAPYKNVIVSGLVMAEDGKK 597
                  ************************************************************************************************** PP

  tRNA-synt_1 564 mSKslgNvidpldvikkygadalRltlilsdvgrdin 600
                  mSK+l+N+++p++vi+kyg dalRl+li+s+v+r++ 
   EPX74150.1 598 MSKRLKNYPEPNYVIEKYGSDALRLFLINSPVVRAEV 634
                  ********************************99875 PP

>> Anticodon_1  Anticodon-binding domain of tRNA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.1   0.1   8.8e-31   3.9e-27       1     149 [.     689     843 ..     689     847 .. 0.87

  Alignments for each domain:
  == domain 1  score: 95.1 bits;  conditional E-value: 8.8e-31
  Anticodon_1   1 drwilselnklvkevteayeeyrfnkaasalyeffwndlcdwylelvkprlysesaedkra.aqevllevletllrllaPfmPfitEelwqr...... 91 
                  drwil++++ l++ v++ +++yr+++++ +l  + ++++ +wy++++++rl++e++e+++  a +vl++vl tl r++aPf+P+itE ++q+      
   EPX74150.1 689 DRWILARCQYLIQFVDQEMQQYRLYTVVPQLLGL-IEEMTNWYIRFNRRRLKGENGEQETVvALNVLFTVLFTLARIMAPFTPYITENIYQQlrnymd 785
                  9********************************5.89999*************99988877799**************************99996665 PP

  Anticodon_1  92 ..eeeelgkk....esimlaewpe.kaeel.ekeleeeevellkeivkairklrselkikpsselk 149
                    +      +    +s++  ++p+  +e l +++   + v++++ i++++r +r++++i+ +++l+
   EPX74150.1 786 idH------NdislRSVHFLPFPSyREE-LsDEAV-LRRVKRMQTIIELARYVREQNNISLKTPLR 843
                  442......3445599*******74443.345555.689999999*****************9987 PP

>> tRNA-synt_1g  tRNA synthetases class I (M)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.1     1e-07   0.00047       8      69 ..      42     104 ..      40     190 .. 0.74
   2 !   15.4   0.1   1.3e-06    0.0059     167     239 ..     394     467 ..     368     475 .. 0.83
   3 !   14.4   0.0   2.6e-06     0.012     304     374 ..     570     645 ..     551     657 .. 0.74

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 1e-07
                   B--SS---HHHHHHHHHHHHHHHHHHHTT-EEEEEEEE---SHHHHHHHHHT.TS-HHHHHHH CS
  tRNA-synt_1g   8 pYangklHlGhllevisaDifaRykrlrgeevlfvcgtDehGtpielkAeke.gvtpeelvek 69 
                   p+a+g +H Ghll   + D ++Ry  l+g++v    g D+hG p+e + +k+ g+t +e v k
    EPX74150.1  42 PFATGLPHHGHLLASTIKDSVTRYACLKGYHVERRFGWDTHGLPVEHEIDKKlGITRSEDVMK 104
                   7899*********99999****************************99765337776554443 PP

  == domain 2  score: 15.4 bits;  conditional E-value: 1.3e-06
                   ..........EEE.EEEEEE-GGGGHHHHHHHH.HH-TTSHHHHHHHH.HHHHT----EE-ESS-SSS-EET..T CS
  tRNA-synt_1g 167 pksaisgskpevketehlffklskfekklkewieeeekeleenvkkivkewlkegLkdlaisrdldwGipvP..g 239
                   p +  s++   +++  ++f k++ +++++ + + +++   ++   k   +wl++  +d++isr+  wG p+P   
    EPX74150.1 394 PFCWRSDTPLLYRTVPSWFVKVKGITDQMVDNVMKTHWVPQNIRDKRFANWLSN-ARDWNISRNRYWGTPIPlwA 467
                   5677777777889999****************98888777777888999***99.9****************652 PP

  == domain 3  score: 14.4 bits;  conditional E-value: 2.6e-06
                   HHH...TT----S-EEEE--EEE-.-------------HHHHHHHH-HHHHHHHHHH.HS-TTS-EEE-HHHHHHH CS
  tRNA-synt_1g 304 llg...aelklpkkvvaheyltve.gkKlSkSrgvvvkakealerldadllRYylaa.eapekkDldfswedfver 374
                   +lg   +++   k+v++++ ++ e gkK+Sk  ++   ++ ++e++ +d+lR +l+     + + l+f+++ + e 
    EPX74150.1 570 VLGtllHGVAPYKNVIVSGLVMAEdGKKMSKRLKNYPEPNYVIEKYGSDALRLFLINsPVVRAEVLKFKEDGVREV 645
                   4554445566678899999877652799***************************993444555567776666555 PP

>> tRNA-synt_1e  tRNA synthetases class I (C) catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   6.4e-06     0.029     242     299 ..     585     645 ..     573     647 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 6.4e-06
                   EEE--EEE.TTBE--TTTT---BHHHHHTTS-HHHHHHHHHSS-T..TS-EEE-HHHHHHH CS
  tRNA-synt_1e 242 lhnghlki.egekmsksLknfitikdvlkkfdprqlRllllsahy..rsqldfkeelleea 299
                   + +g ++  +g+kmsk Lkn+   + v++k+ + +lRl+l++      + l+fke+ ++e+
    EPX74150.1 585 IVSGLVMAeDGKKMSKRLKNYPEPNYVIEKYGSDALRLFLINSPVvrAEVLKFKEDGVREV 645
                   556766662689****************************986541156799999877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1064 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       717  (0.0399911); expected 358.6 (0.02)
Passed bias filter:                      597  (0.033298); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.81u 0.27s 00:00:01.08 Elapsed: 00:00:00.47
# Mc/sec: 6763.41
//
Query:       EPX74151.1  [L=843]
Description: spindle pole body protein Sfi1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.6e-103  346.5  84.8   2.6e-103  346.5  84.8    1.9  2  Sfi1      Sfi1 spindle body protein


Domain annotation for each model (and alignments):
>> Sfi1  Sfi1 spindle body protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    0.5   0.3    0.0092   1.6e+02     177     225 ..     155     203 ..     122     208 .. 0.61
   2 !  346.5  84.8  1.4e-107  2.6e-103       2     569 ..     209     771 ..     208     772 .. 0.98

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.0092
        Sfi1 177 seevqaaeaeadsllrqkllrrvleewrkqarlepalrqvsakkdtrll 225
                  ++++  + + +s ++++ll++ + ++  +++ +++++ + ++k t + 
  EPX74151.1 155 LSAMSRLADQFRSIREHQLLATTFYYLLDKHMYQKKISTIYERKSTAVH 203
                 3445555555666666777777777777777777776666666665554 PP

  == domain 2  score: 346.5 bits;  conditional E-value: 1.4e-107
        Sfi1   2 leekrqaaeterfferlerrAerardlylltkafthWaqltseevertsaarrhiLrkkyfnaWreltavnelKaqrfalkkplkkWkartkeieeree 100
                 l++++++++++r++++++ +Ae+a++l++ ++++  W+++t+e ++r+   +r+ L +k++++W++l++++++K++r++l +++ +Wk+r+k++ ++++
  EPX74151.1 209 LKYFPAWVQRMRQVREVMYTAESAYNLVVQENFMYAWRKKTREVYARYIEEQRKELLQKTIHQWNKLANKWKEKHERILLLRFFIQWKLRRKQQCNKRN 307
                 678999********************************************************************************************* PP

        Sfi1 101 kavqvykqkllkrsywkwfwefkerraekwrderlkrrsllkWlrklrenrereqeaeakrkrlllqkalqiwserseevqaaeaeadsllrqkllrrv 199
                 +av +y  +l+k++++kw+ +f+ + + k +++ +  +++ kW+++l ++++ +++a ++   ++++  + +w+++++++++  +ead+++   ll++ 
  EPX74151.1 308 EAVNFYYYSLCKNGLRKWRLKFSISTVRKAQKKGVLVNTFVKWQNTLVKKQQLRDKANSEFISNSKRTYVLKWYSKASNHYTLYEEADEYYYGLLLQKT 406
                 *************************************************************************************************** PP

        Sfi1 200 leewrkqarlepalrqvsakkdtrllksalesWkkrlemsrqarevdrtrllrnaltsWndelrlkalreriderillealykWvleeRlrlfqrireq 298
                 l +w+ ++  +++l+ +++++d ++l+ ++++W++++++  +  ++++++l++++lt+W++++++  +++ +d+ +l+ ++++W+++e+ r f ++++q
  EPX74151.1 407 LIYWKSKTSAYEKLDVWTNEHDVEILRATFKRWRHQFSRIVDGLQLADYILQDTFLTRWRLAIKTSKFQKMRDYALLARVYKFWRIKEKERAFGYHYNQ 505
                 *************************************************************************************************** PP

        Sfi1 299 rlkrevlstlvtntretrtrllqaeeeaeehrkekllrsvlekwreklaeqrereeeAsefyaprlaqecldawkerlqhvqklekwakdarfyf...l 394
                 rl  +v++++v++t+    + ++ +e + + r +k++++++ +wr+kl e +e  ++ +++++++++ +++++wk+ +q++++l   +++a++++   l
  EPX74151.1 506 RLVVKVWDAWVDQTQG-LLENKETAEYLYQKRLAKTAKTFILTWRMKLLEHEELLIHGDDVHEKKTKLNVWNRWKYIMQRKTRL---RWRADLMYdkkL 600
                 ****************.7777888888888999999************************************************...9999999999** PP

        Sfi1 395 atkaLkkWrkateesrreRrrdayaqvrrkvkinLaskalnaWrskaaevaalsqqaeqleqeklleaaielldkWrektlerkkraeeadelyaeqll 493
                 ++ ++k Wr+++ee++  ++++++++++ ++  +L+ +++n W++ka++ + l   a++++q+    ++i+  ++W+ +++++k+++e+a+ +y+e+ll
  EPX74151.1 601 VKLSMKIWRDVCEEEITIKLETKVVDFQASMTEKLVDRYWNIWIEKAMNLSTLAVVADRARQR----VLIRAYETWSYRHNKLKEKVERAEHFYNERLL 695
                 ***************************************************************....7777899************************* PP

        Sfi1 494 ekalarwkerlrelqeleeqAeqveaekqlsiasaaLkklslrlfqikskeetAealrernerkhvRnmlrhWlqr 569
                 ++a ++w+++lr++q+l++ +e++++e++++i+++++++++l +f+++s++++Ae++++++++k++++m+r+W+qr
  EPX74151.1 696 RSASIFWRYQLRAVQFLQNISEWKRREFDRGIMRRTFDSWNLLTFRVTSHTMQAERFYQQKQSKLLGKMFRRWIQR 771
                 ***************************************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (843 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1362  (0.0759663); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.74u 0.27s 00:00:01.01 Elapsed: 00:00:00.48
# Mc/sec: 5314.63
//
Query:       EPX74152.1  [L=134]
Description: histone H3 h3.1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-49  168.1   0.6    1.3e-49  167.9   0.6    1.0  1  Histone        Core histone H2A/H2B/H3/H4
    1.2e-05   25.6   0.0    1.7e-05   25.1   0.0    1.2  1  CENP-S         CENP-S protein
    0.00016   21.8   0.0    0.00029   20.9   0.0    1.4  1  CENP-T_C       Centromere kinetochore component CENP-T histon
     0.0022   18.2   0.2     0.0048   17.2   0.0    1.6  2  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a
  ------ inclusion threshold ------
      0.021   15.4   0.4      0.028   15.0   0.4    1.1  1  PAF            PCNA-associated factor histone like domain


Domain annotation for each model (and alignments):
>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  167.9   0.6   3.7e-53   1.3e-49       7     131 .]       5     130 ..       2     130 .. 0.98

  Alignments for each domain:
  == domain 1  score: 167.9 bits;  conditional E-value: 3.7e-53
                 EEEXXXXEEXXXXXXXXXXHT.TS-SSSSB--TTT-XTTHHHHHHHHHHHHXXSXXSXHHHHHHHHHHHH.TTSSSXEEXHHHHHHHHHHHHHHHHHHH CS
     Histone   7 karkesektapekkvsakker.kasskskkkkkrryrpgtvalkeirkyqkstdlliqklpfaRvvreivksekedlrisaeavlalqealEallvelf 104
                 +ark+++++ap+k++++k +r  a+++   kk++ryrpgtval+eir+yqkst+lli+klpf+R+vrei +++k+dlr++++av alqea+Ea+lv+lf
  EPX74152.1   5 TARKSTGGKAPRKQLASKAARkAAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVGALQEAVEAYLVSLF 103
                 68999****************99**************************************************************************** PP

                 HHHHHHHHHTTXSEEXHHHHHHHHHHT CS
     Histone 105 eeAnllakhaKRvTitpkDiqlArrlr 131
                 e++nl+a+h KRvTi+pkD+qlArrlr
  EPX74152.1 104 EDTNLCAIHGKRVTIQPKDMQLARRLR 130
                 *************************97 PP

>> CENP-S  CENP-S protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.0   4.8e-09   1.7e-05      13      71 ..      68     128 ..      63     131 .. 0.85

  Alignments for each domain:
  == domain 1  score: 25.1 bits;  conditional E-value: 4.8e-09
      CENP-S  13 kiveeeaa..ekeveatkqfiaaltelvykqlenlakDLeaFakHAkRstittdDvlLlaR 71 
                 ++v+e+a+  ++++++ +++++al e v + l +l +D ++ a H kR ti+++D+ L  R
  EPX74152.1  68 RLVREIAQdfKTDLRFQSSAVGALQEAVEAYLVSLFEDTNLCAIHGKRVTIQPKDMQLARR 128
                 5566654423667789999*************************************99766 PP

>> CENP-T_C  Centromere kinetochore component CENP-T histone fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0     8e-08   0.00029      11      72 ..      68     125 ..      56     133 .. 0.83

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 8e-08
    CENP-T_C  11 avvkklakrfakasgskaklekealkalekasdkffeqvgeDLeayakHagRKtidesDvil 72 
                  +v+ +a++f     +  + + +a+ al++a + ++  + eD +  a H++R ti+ +D+ l
  EPX74152.1  68 RLVREIAQDF----KTDLRFQSSAVGALQEAVEAYLVSLFEDTNLCAIHGKRVTIQPKDMQL 125
                 3455566666....56799****************************************975 PP

>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1       1.9   6.8e+03      39      48 ..      18      27 ..      17      30 .. 0.64
   2 !   17.2   0.0   1.3e-06    0.0048       2      64 ..      63     126 ..      62     126 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1.9
                   HHHHHHHHHH CS
  CBFD_NFYB_HMF 39 elaseAaeic 48
                   +las+Aa+++
     EPX74152.1 18 QLASKAARKA 27
                   5677777654 PP

  == domain 2  score: 17.2 bits;  conditional E-value: 1.3e-06
                    XXXHHHHHHHHHCC.TTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHH CS
  CBFD_NFYB_HMF   2 eLPiarvkkImksd.pdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehiklA 64 
                    +LP  r  + + +d + + ++ ++A   ++e+ve ++ +l + ++  + + kr ti++++++lA
     EPX74152.1  63 KLPFQRLVREIAQDfKTDLRFQSSAVGALQEAVEAYLVSLFEDTNLCAIHGKRVTIQPKDMQLA 126
                    78888888877777799999*****************************************998 PP

>> PAF  PCNA-associated factor histone like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.4   7.7e-06     0.028      11      62 ..       6      56 ..       2      75 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 7.7e-06
         PAF 11 arkavaakAprkslgassssssssssspkkkkkkyvGGNpvcpRptPaWQKp 62
                ark  ++kAprk+l+++   +++  ++  kk + y +G  v  R++   QK 
  EPX74152.1  6 ARKSTGGKAPRKQLASKAARKAAPATGGVKKPHRYRPG-TVALREIRRYQKS 56
                5999***************9999999988888888888.6888999888885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       408  (0.0227564); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.41u 0.27s 00:00:00.68 Elapsed: 00:00:00.43
# Mc/sec: 940.41
//
Query:       EPX74153.1  [L=136]
Description: histone H3 h3.1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.8e-52  175.8   1.4    5.4e-52  175.6   1.4    1.0  1  Histone        Core histone H2A/H2B/H3/H4
    1.2e-05   25.6   0.0    1.8e-05   25.0   0.0    1.2  1  CENP-S         CENP-S protein
    0.00015   21.8   0.0     0.0003   20.9   0.0    1.5  1  CENP-T_C       Centromere kinetochore component CENP-T histon
    0.00026   21.6   1.4    0.00032   21.3   1.4    1.1  1  PAF            PCNA-associated factor histone like domain
     0.0022   18.3   0.2     0.0049   17.1   0.0    1.6  2  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a


Domain annotation for each model (and alignments):
>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.6   1.4   1.5e-55   5.4e-52       1     131 []       1     132 [.       1     132 [. 0.99

  Alignments for each domain:
  == domain 1  score: 175.6 bits;  conditional E-value: 1.5e-55
                 XXEESXEEEXXXXEEXXXXXXXXXXHT.TS-SSSSB--TTT-XTTHHHHHHHHHHHHXXSXXSXHHHHHHHHHHHH.TTSSSXEEXHHHHHHHHHHHHH CS
     Histone   1 marekekarkesektapekkvsakker.kasskskkkkkrryrpgtvalkeirkyqkstdlliqklpfaRvvreivksekedlrisaeavlalqealEa 98 
                 mar+k++ark+++++ap+k++++k +r  a+++   kk++ryrpgtval+eir+yqkst+lli+klpf+R+vrei +++k+dlr++++av alqea+Ea
  EPX74153.1   1 MARTKQTARKSTGGKAPRKQLASKAARkAAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVGALQEAVEA 99 
                 9**************************9*********************************************************************** PP

                 HHHHHHHHHHHHHHHTTXSEEXHHHHHHHHHHT CS
     Histone  99 llvelfeeAnllakhaKRvTitpkDiqlArrlr 131
                 +lv+lfe++nl+a+h KRvTi+pkD+qlArrlr
  EPX74153.1 100 YLVSLFEDTNLCAIHGKRVTIQPKDMQLARRLR 132
                 *******************************97 PP

>> CENP-S  CENP-S protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.0     5e-09   1.8e-05      13      71 ..      70     130 ..      65     133 .. 0.85

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 5e-09
      CENP-S  13 kiveeeaa..ekeveatkqfiaaltelvykqlenlakDLeaFakHAkRstittdDvlLlaR 71 
                 ++v+e+a+  ++++++ +++++al e v + l +l +D ++ a H kR ti+++D+ L  R
  EPX74153.1  70 RLVREIAQdfKTDLRFQSSAVGALQEAVEAYLVSLFEDTNLCAIHGKRVTIQPKDMQLARR 130
                 5566654423667789999*************************************99766 PP

>> CENP-T_C  Centromere kinetochore component CENP-T histone fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0   8.3e-08    0.0003      11      72 ..      70     127 ..      58     135 .. 0.83

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 8.3e-08
    CENP-T_C  11 avvkklakrfakasgskaklekealkalekasdkffeqvgeDLeayakHagRKtidesDvil 72 
                  +v+ +a++f     +  + + +a+ al++a + ++  + eD +  a H++R ti+ +D+ l
  EPX74153.1  70 RLVREIAQDF----KTDLRFQSSAVGALQEAVEAYLVSLFEDTNLCAIHGKRVTIQPKDMQL 127
                 3455566666....56799****************************************975 PP

>> PAF  PCNA-associated factor histone like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   1.4   8.9e-08   0.00032       1      62 [.       1      58 [.       1      76 [. 0.90

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 8.9e-08
         PAF  1 mVRTkAdvssarkavaakAprkslgassssssssssspkkkkkkyvGGNpvcpRptPaWQKp 62
                m RTk ++   rk  ++kAprk+l+++   +++  ++  kk + y +G  v  R++   QK 
  EPX74153.1  1 MARTKQTA---RKSTGGKAPRKQLASKAARKAAPATGGVKKPHRYRPG-TVALREIRRYQKS 58
                99******...******************9999999988888888888.6888999888885 PP

>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1       1.9   6.9e+03      39      48 ..      20      29 ..      19      32 .. 0.64
   2 !   17.1   0.0   1.4e-06    0.0049       2      64 ..      65     128 ..      64     128 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 1.9
                   HHHHHHHHHH CS
  CBFD_NFYB_HMF 39 elaseAaeic 48
                   +las+Aa+++
     EPX74153.1 20 QLASKAARKA 29
                   5677777654 PP

  == domain 2  score: 17.1 bits;  conditional E-value: 1.4e-06
                    XXXHHHHHHHHHCC.TTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHH CS
  CBFD_NFYB_HMF   2 eLPiarvkkImksd.pdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehiklA 64 
                    +LP  r  + + +d + + ++ ++A   ++e+ve ++ +l + ++  + + kr ti++++++lA
     EPX74153.1  65 KLPFQRLVREIAQDfKTDLRFQSSAVGALQEAVEAYLVSLFEDTNLCAIHGKRVTIQPKDMQLA 128
                    78888888877777799999*****************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       435  (0.0242624); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.42u 0.28s 00:00:00.70 Elapsed: 00:00:00.45
# Mc/sec: 915.80
//
Query:       EPX74154.1  [L=103]
Description: histone H4 h4.2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-08   35.0   0.1    1.5e-08   34.7   0.1    1.2  1  CENP-T_C       Centromere kinetochore component CENP-T histon
      1e-05   25.7   0.1    1.7e-05   25.0   0.0    1.5  1  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a
      5e-05   23.4   0.1    6.7e-05   23.0   0.1    1.2  1  TAF            TATA box binding protein associated factor (TA
    5.6e-05   23.5   0.2    6.4e-05   23.3   0.2    1.2  1  Histone        Core histone H2A/H2B/H3/H4
     0.0002   21.7   0.1    0.00028   21.2   0.1    1.4  1  CENP-S         CENP-S protein
  ------ inclusion threshold ------
      0.015   15.4   0.0      0.017   15.2   0.0    1.1  1  TFIID-31kDa    Transcription initiation factor IID, 31kD subu
      0.063   13.3   0.0      0.087   12.8   0.0    1.3  1  Bromo_TP       Bromodomain associated
       0.13   12.8   0.0       0.25   11.9   0.0    1.4  1  TFIID_20kDa    Transcription initiation factor TFIID subunit 


Domain annotation for each model (and alignments):
>> CENP-T_C  Centromere kinetochore component CENP-T histone fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.7   0.1   6.9e-12   1.5e-08      16      79 ..      33      96 ..      18      99 .. 0.85

  Alignments for each domain:
  == domain 1  score: 34.7 bits;  conditional E-value: 6.9e-12
    CENP-T_C 16 lakrfakasgskaklekealkalekasdkffeqvgeDLeayakHagRKtidesDvilLmkrqrk 79
                 a r   ++g  +++++  ++    +++ f+e v +D  +y++Ha+RKt+ + Dv+  +krq++
  EPX74154.1 33 PAIRRLARRGGVKRISALVYEETRAVLKLFLESVIRDAVTYTEHAKRKTVTSLDVVYSLKRQGR 96
                4444444456777999999999****************************************86 PP

>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.0   7.7e-09   1.7e-05       7      61 ..      34      87 ..      28      91 .. 0.93

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 7.7e-09
                   HHHHHHHCCTTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHH CS
  CBFD_NFYB_HMF  7 rvkkImksdpdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehi 61
                   +++++ +   ++++i+  + e    ++++f+e++ + A+ +++++krKt++  ++
     EPX74154.1 34 AIRRLARRG-GVKRISALVYEETRAVLKLFLESVIRDAVTYTEHAKRKTVTSLDV 87
                   688999999.99***************************************9998 PP

>> TAF  TATA box binding protein associated factor (TAF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.1     3e-08   6.7e-05       4      66 .]      30      92 ..      27      92 .. 0.91

  Alignments for each domain:
  == domain 1  score: 23.0 bits;  conditional E-value: 3e-08
                --HHHHHHHHHHTT---B-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SSB-HHHHHHHH- CS
         TAF  4 lpkesvkviAeslGitnLsdeaaalLaedveyrlkeivqeaakfmrhskRqkLtvaDvdsALr 66
                ++k +++ +A   G++ +s+ + ++    ++  l  ++++a+ +++h+kR++ t+ Dv ++L+
  EPX74154.1 30 ITKPAIRRLARRGGVKRISALVYEETRAVLKLFLESVIRDAVTYTEHAKRKTVTSLDVVYSLK 92
                577789999999999999999999999999999*************************99997 PP

>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.2   2.9e-08   6.4e-05      77     125 ..      40      88 ..      16      94 .. 0.86

  Alignments for each domain:
  == domain 1  score: 23.3 bits;  conditional E-value: 2.9e-08
                 TTSSSXEEXHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTXSEEXHHHHH CS
     Histone  77 sekedlrisaeavlalqealEallvelfeeAnllakhaKRvTitpkDiq 125
                 +++  +risa   +   ++l+ +l+++  +A  +++haKR+T+t+ D+ 
  EPX74154.1  40 RRGGVKRISALVYEETRAVLKLFLESVIRDAVTYTEHAKRKTVTSLDVV 88 
                 477788999999999999***************************9986 PP

>> CENP-S  CENP-S protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.1   1.2e-07   0.00028      34      73 ..      47      94 ..      20      96 .. 0.81

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 1.2e-07
      CENP-S 34 ltelvykq........lenlakDLeaFakHAkRstittdDvlLlaRrn 73
                ++ lvy++        le++ +D  ++ +HAkR+t+t  Dv+  ++r+
  EPX74154.1 47 ISALVYEEtravlklfLESVIRDAVTYTEHAKRKTVTSLDVVYSLKRQ 94
                5566666655555555889999*******************9988875 PP

>> TFIID-31kDa  Transcription initiation factor IID, 31kD subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.0   7.7e-06     0.017      13      69 ..      37      93 ..      31     101 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 7.7e-06
  TFIID-31kDa 13 liLaslgvteyeerVvlqLldfayrytssvLedAkvlaehakkkevslddvrlAiqs 69
                  + +  gv+ ++  V++    +   +  sv++dA ++ ehak+k+v+  dv  +++ 
   EPX74154.1 37 RLARRGGVKRISALVYEETRAVLKLFLESVIRDAVTYTEHAKRKTVTSLDVVYSLKR 93
                 556667888888888888888888999***********************9888765 PP

>> Bromo_TP  Bromodomain associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   3.9e-05     0.087      35      70 ..      58      93 ..      37      97 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3.9e-05
                HHHHHHHHHHHHHHHHHTTSS-SS--HHHHHHHHHH CS
    Bromo_TP 35 iaqkYirelgeqaksfaehagRseptlkDvvltLqe 70
                +++ +++++ ++a  + eha R ++t  Dvv +L++
  EPX74154.1 58 VLKLFLESVIRDAVTYTEHAKRKTVTSLDVVYSLKR 93
                6777999999***********************997 PP

>> TFIID_20kDa  Transcription initiation factor TFIID subunit A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00011      0.25      33      65 ..      62      94 ..      51      95 .. 0.94

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00011
                 HHHHHHHHHHHHHHHTT-SEE-HHHHHHHHHHH CS
  TFIID_20kDa 33 FvesvtkfacklakhRksdklevrDiqlhlern 65
                 F esv+  a+    h k +++ + D+ + l+r+
   EPX74154.1 62 FLESVIRDAVTYTEHAKRKTVTSLDVVYSLKRQ 94
                 9******************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       511  (0.0285013); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.42u 0.22s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 774.32
//
Query:       EPX74155.1  [L=167]
Description: vacuolar sorting protein Vps68 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-59  199.0   7.8    4.3e-59  198.8   7.8    1.0  1  UPF0220   Uncharacterised protein family (UPF0220)
  ------ inclusion threshold ------
       0.15   12.5   1.4       0.35   11.3   0.2    1.9  2  DUF1689   Protein of unknown function (DUF1689)
        3.8    7.2   9.1        9.9    5.9   8.3    1.9  1  TrpP      Tryptophan transporter TrpP


Domain annotation for each model (and alignments):
>> UPF0220  Uncharacterised protein family (UPF0220)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  198.8   7.8   7.1e-63   4.3e-59       3     166 .]       6     161 ..       4     161 .. 0.97

  Alignments for each domain:
  == domain 1  score: 198.8 bits;  conditional E-value: 7.1e-63
     UPF0220   3 drlfrfrkpklklensakrravgvylaGaLfalgfwlliDaaivskkanasdvhvtfvdwipgicstlgmlivnsieksrlsgdslgqsgssvawkarv 101
                 ++lfrfr+++l+l    + r++gvy+aG++fa+++w++iD+a++s  + +s++h+tfvdwip++cs+lgm+ivnsi+ksrlsgds++++++s+a kar+
  EPX74155.1   6 TSLFRFRLSSLHL----SSRTLGVYFAGVMFASAVWVFIDTALYSAFNYGSTLHITFVDWIPFLCSVLGMIIVNSIDKSRLSGDSFAYTDESLARKARF 100
                 6799**9997766....889******************************************************************************* PP

     UPF0220 102 vLflGfallagglagslvvlilkYvvkdytefptlgmGvanvlqNllimlssvvlwvsqnvedeY 166
                 +Lf+Gfallaggl gs++v+ilkYvv++y     l+mG+anv++N+l m+s++ lw++ n++d+Y
  EPX74155.1 101 ILFIGFALLAGGLGGSFTVFILKYVVPGYS----LTMGIANVVCNVLFMISATTLWITGNMNDDY 161
                 *****************************3....9*****************************9 PP

>> DUF1689  Protein of unknown function (DUF1689)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1      0.14   8.6e+02      39      81 ..      33      77 ..      20      90 .. 0.74
   2 ?   11.3   0.2   5.9e-05      0.35      29      90 ..     104     166 ..      85     167 .] 0.86

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.14
     DUF1689 39 lgfsavflaptayrryktgaikgvkvpr..sfllGlvalvvssql 81
                ++++ vf+   +y  ++ g++  +       fl+ ++++++++++
  EPX74155.1 33 ASAVWVFIDTALYSAFNYGSTLHITFVDwiPFLCSVLGMIIVNSI 77
                566677777778888877776666554456888888888887766 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 5.9e-05
     DUF1689  29 iaraqllggwlgfsavflaptayrryk.tgaikgvkvprsfllGlvalvvssqlaakyaykkk 90 
                 i +a l gg++g + vf++ +++  y+ t  i +v  +  f++  ++l ++ ++  +y y+ +
  EPX74155.1 104 IGFALLAGGLGGSFTVFILKYVVPGYSlTMGIANVVCNVLFMISATTLWITGNMNDDYHYNLQ 166
                 56677899*************998886377899**9************************977 PP

>> TrpP  Tryptophan transporter TrpP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   8.3    0.0017       9.9     121     166 ..     100     149 ..      28     152 .. 0.76

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0017
        TrpP 121 GivflgsaliivGlpasfaalfltvvlpavvl....ntivgliiyrivkk 166
                  i+f+g al+  Gl +sf+++ l  v+p   l      +v  ++++i  +
  EPX74155.1 100 FILFIGFALLAGGLGGSFTVFILKYVVPGYSLtmgiANVVCNVLFMISAT 149
                 589*************************8665111145666777777655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       721  (0.0402142); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1312.14
//
Query:       EPX74156.1  [L=382]
Description: CMGC/GSK protein kinase Gsk31 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.7e-64  216.7   0.0    4.3e-64  216.4   0.0    1.0  1  Pkinase      Protein kinase domain
    8.4e-27   94.1   0.0    1.5e-26   93.2   0.0    1.5  1  Pkinase_Tyr  Protein tyrosine kinase
    4.7e-07   29.4   0.0    1.8e-06   27.5   0.0    1.9  2  Kinase-like  Kinase-like
    0.00034   20.6   0.0       0.01   15.7   0.0    2.3  2  APH          Phosphotransferase enzyme family
    0.00077   18.9   0.0     0.0012   18.3   0.0    1.2  1  Kdo          Lipopolysaccharide kinase (Kdo/WaaP) family
     0.0025   17.5   0.1       0.21   11.2   0.0    2.2  2  FTA2         Kinetochore Sim4 complex subunit FTA2


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  216.4   0.0   1.4e-67   4.3e-64       1     264 []      26     310 ..      26     310 .. 0.93

  Alignments for each domain:
  == domain 1  score: 216.4 bits;  conditional E-value: 1.4e-67
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEE......SSEEEEEEE--TTEBHHHHHH... CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfee......kdelylvleyveggeladlle... 90 
                 ye+ + +G+GsfG+V+ka+   +++ +AvK++ ++k+ k+      rE++i++ ++h+niv+l+ +f++      +++l l+ley++++ ++d+     
  EPX74156.1  26 YEVFQVIGSGSFGVVMKAKIVGSQQFIAVKRVFQDKRYKN------RELQIMRAISHQNIVNLIAFFHTynptndETHLSLLLEYLPETVFEDMRWytr 118
                 78999****************************9988873......69*************************9999**********998766544556 PP

                 HHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEE.TTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHH.TTSCBSHHHHHHHHHHHH CS
     Pkinase  91 rkgslseeeakkiakqilegleylHskgiiHrDlKpeNiLid.ekgelKitDFGlakelessskltsfvgtseYlAPEvl.keneyskkvDvWslGvil 187
                 r++sls   +k +a qi+++l+ylHs gi+HrD+Kp+N+L+d ++g lK++DFG ak l  s++  s++++++Y+A E++ ++++y++k+DvWs+G+++
  EPX74156.1 119 RHKSLSTLSIKIYAFQIFRALSYLHSTGICHRDIKPQNLLVDyRTGILKLCDFGSAKILIPSEPNVSYICSRYYRASELVfGATHYTTKIDVWSAGCVI 217
                 9999**************************************99999*********************************99***************** PP

                 HHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCT...SHH...HHHTTS....................-HHHHHHHHHHT-SSGCCSTTHHHHHTSGG CS
     Pkinase 188 yelltgkppfsgekgkekvekeldqlekilkilg...etkeklpeasei....................seeakdllkkllkkdpkkRltaeellqhpy 263
                 +el+ g+p+f+   g++     ++ql++i+k+lg   +++ ++ +++ +                    +++++dllkk+l + p+kR++  e+l hp+
  EPX74156.1 218 AELILGRPLFP---GDS----SVEQLVEIIKVLGtpsQQEITSMNPNYVhhalpnvrphflesilpkhvPKNVLDLLKKVLVYVPSKRISSIEVLTHPF 309
                 ***********...655....78999999****9765444444455555899*********************************************** PP

                 G CS
     Pkinase 264 l 264
                 +
  EPX74156.1 310 F 310
                 8 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.2   0.0   5.2e-30   1.5e-26       4     218 ..      29     240 ..      26     306 .. 0.81

  Alignments for each domain:
  == domain 1  score: 93.2 bits;  conditional E-value: 5.2e-30
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEE......SSSSEEEEEE--TTE...BHHHHH CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvct......keepllivteyvkgG...dLlkfL 92 
                   + +G+G+fG V+++++      +++ +avK + ++++ +      +e++im++++h+niv+l+++        +e +l +++ey+++    d++ + 
   EPX74156.1  29 FQVIGSGSFGVVMKAKIV----GSQQFIAVKRVFQDKRYK-----NRELQIMRAISHQNIVNLIAFFHtynptnDETHLSLLLEYLPETvfeDMRWYT 117
                  578***************....78899******7766666.....68******************998565554445599******998666888899 PP

                  HHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE.TTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE.EEHHHHH CS
  Pkinase_Tyr  93 rkkekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse.nkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk.ftsksDv 188
                  r++  ++l++ ++  +a+q+ ++++yL+s  + Hrd+  +N L++  + + k++DfG a+ +  +   + + +  ++  + a E ++  + +t+k Dv
   EPX74156.1 118 RRH--KSLSTLSIKIYAFQIFRALSYLHSTGICHRDIKPQNLLVDYrTGILKLCDFGSAKILIPS---EPNVSYICSRYYRASELVFGAThYTTKIDV 210
                  998..9999999999*****************************962669*********999333...3344556666778***9987655******* PP

                  HHHHHHHHHHHTTSSGTTTTS.HHHHHHHHH CS
  Pkinase_Tyr 189 WsfGvllwEiftlgespypgl.kneevlekl 218
                  Ws G ++ E++  g+  +pg  + e+++e +
   EPX74156.1 211 WSAGCVIAELIL-GRPLFPGDsSVEQLVEII 240
                  **********97.777776653444444444 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.31   9.3e+02      17      60 ..      29      72 ..      19     104 .. 0.65
   2 !   27.5   0.0   6.2e-10   1.8e-06     124     240 ..      98     217 ..      52     221 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.31
  Kinase-like 17 gellkkgdrsvvfevkdqetgeplavkvfllpseaskkdlerlk 60
                  ++++ g ++vv+++k +  ++ +avk     ++  +++l+ ++
   EPX74156.1 29 FQVIGSGSFGVVMKAKIVGSQQFIAVKRVFQDKRYKNRELQIMR 72
                 58899999999999999999999999876666655555555443 PP

  == domain 2  score: 27.5 bits;  conditional E-value: 6.2e-10
  Kinase-like 124 l........eilnkvlqkrsethkkletiarlllTlqlirlaanLqakglvhgkftvdnllldek.gglmlggftaLvragtkvvlsevekgfaPpE. 211
                  l        e++++ +     +hk+l t++ ++   q+ r   +L++ g+ h +++++nll d + g l+l +f++        + se ++++     
   EPX74156.1  98 LsllleylpETVFEDMRWYTRRHKSLSTLSIKIYAFQIFRALSYLHSTGICHRDIKPQNLLVDYRtGILKLCDFGSAK---ILIP-SEPNVSYICSRy 191
                  2556666667888889988999****************************************96616689****9743...3333.444444433220 PP

  Kinase-like 212 llgsrggytrknktkmthkldaWqlGlvi 240
                   ++s   ++    t++t k+d+W  G vi
   EPX74156.1 192 YRASELVFGA---THYTTKIDVWSAGCVI 217
                  3344333555...89999********998 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0     0.042   1.3e+02      36      84 ..      63     112 ..      45     123 .. 0.84
   2 !   15.7   0.0   3.5e-06      0.01     164     185 ..     143     163 ..     114     179 .. 0.76

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.042
                 HHHHHHHHHHHHHHTT-.B--B-CTTBS-EEETTEEEEEEE----EE-SS CS
         APH  36 eirrevallrlLakagv.pvPevlagdtddeeigllfalieyvpgrsllr 84 
                    re++++r+++ +++    + +++ +  +++ +l++l+ey+p +++++
  EPX74156.1  63 YKNRELQIMRAISHQNIvNLIAFFHTYNPTNDETHLSLLLEYLPETVFED 112
                 556999*******9*99888899999999999999**********99988 PP

  == domain 2  score: 15.7 bits;  conditional E-value: 3.5e-06
                 S-EEEE-SS-SGGGEEEC..TT CS
         APH 164 lptvllHgDlhpgNllvdpddg 185
                  +t+++H+D++p+Nllvd + +
  EPX74156.1 143 HSTGICHRDIKPQNLLVDYR-T 163
                 479***************33.3 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0   3.9e-07    0.0012      59     155 ..      65     163 ..      54     178 .. 0.87

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 3.9e-07
         Kdo  59 vrEfrllkrLeeagvavpkpvaagavkvgleyrAlllterleg..aqdLedllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqee 155
                  rE++++++  ++ +  + + +  ++  + e +  ll e l +  ++d+  + +++++l+  + +    ++ r+ + lh+ g++H+d+ ++n+l++ + 
  EPX74156.1  65 NRELQIMRAISHQNIVNLIAFFHTYNPTNDETHLSLLLEYLPEtvFEDMRWYTRRHKSLSTLSIKIYAFQIFRALSYLHSTGICHRDIKPQNLLVDYRT 163
                 589999999999999999999999999999999999999996522689999999988899999999999**************************9876 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.2   0.0    0.0095        28      23      82 ..      25      86 ..      14      96 .. 0.67
   2 !   11.2   0.0   6.9e-05      0.21     180     214 ..     134     174 ..     114     175 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.0095
        FTA2 23 diefleyLgkglhsiVlkvkirgk..eYALK.lFrfleaeele..eaeedlkiprealkelasys 82
                ++e  +++g+g  ++V+k+ki g+    A+K +F + ++   +  e + +  i+++++ +l +++
  EPX74156.1 25 SYEVFQVIGSGSFGVVMKAKIVGSqqFIAVKrVFQDKRY---KnrELQIMRAISHQNIVNLIAFF 86
                56788999*************887334577723333322...22355556666666666666665 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 6.9e-05
        FTA2 180 kllrdlkklhklgIvvrDlkeen....yidg..kLvDlsaa 214
                 ++ r l  lh+ gI +rD+k++n    y+ g  kL+D+++a
  EPX74156.1 134 QIFRALSYLHSTGICHRDIKPQNllvdYRTGilKLCDFGSA 174
                 7999******************9444445556678999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       463  (0.0258241); expected 358.6 (0.02)
Passed bias filter:                      407  (0.0227007); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.56u 0.29s 00:00:00.85 Elapsed: 00:00:00.46
# Mc/sec: 2471.46
//
Query:       EPX74157.1  [L=353]
Description: TOM complex subunit Tom40 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-83  280.6   0.0    1.5e-83  280.4   0.0    1.0  1  Porin_3   Eukaryotic porin
  ------ inclusion threshold ------
      0.062   12.8   0.0       0.11   12.0   0.0    1.3  1  GP11      GP11 baseplate wedge protein


Domain annotation for each model (and alignments):
>> Porin_3  Eukaryotic porin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  280.4   0.0   1.7e-87   1.5e-83       1     270 []      29     318 ..      29     318 .. 0.99

  Alignments for each domain:
  == domain 1  score: 280.4 bits;  conditional E-value: 1.7e-87
                 S---CCCCCHHH.HHHHHCCHTTTECEEEEEEEECCECCEEEEEEEETTTS.-ECEEEEEEEEETCCCEEEEEECCCSCCEEEEEECCSSTTCEEEEEE CS
     Porin_3   1 nPgtyedlgkea.kdllpkdYhfeglkldvtkktslgvaFqvshsfslgsg.kvsysfeakykdkgltltlkgntdndlsltarvneqlaeglklklsa 97 
                 nPgt e+l+ke+ kdll+ +Y f+g+++dvtk +s+++ F+vsh f lgs+ +++ysf++++   g  l+l+g++dnd++++a++n+ + +++ +k+++
  EPX74157.1  29 NPGTTENLSKEVsKDLLLSNYAFTGIRADVTKGFSTNPWFTVSHAFALGSQmLPPYSFSTMFG--GEPLFLRGSVDNDGAVQAMLNCAWGPNVISKVQM 125
                 8**************************************************************..********************************** PP

                 EE-TTT--EEEEEEEEEEETTEEEEEEEEC.TC....EEEEEEEEEEECTSTEEEEEEEEEECTTTCCEEEEEEEEEEEC....SEEEEEEEEETTTEE CS
     Porin_3  98 qltpekgkksakleldykgddftaslklgn.sk....tpvvvasllqsvtpglalGaeavydtasgkltkyaaalsyaar....dwiaslqllnnggal 187
                 ql++   ++++++e+d++g+df++s+k++n       t+++ +s+lqs+tp+l++G+ea+++ +s+++++++aalsy+ar    dwia+++l++ +g++
  EPX74157.1 126 QLADAAIPSMCQIEHDHRGKDFSFSVKAMNpWYedklTGIYILSMLQSLTPKLSVGVEALWQKPSASIGPEEAALSYMARynagDWIATGHLNGTQGDV 224
                 ******************************9889***************************************************************** PP

                 EEEEEEECCTTEEEEEEEEEETTEE............EEEEEEEEEEEECTCEEEEEEEECTTEEEEEEEEEECTTEEEEEEEEEECCCTEEEEE CS
     Porin_3 188 tasyyqkvsekvevgaeltlnassq............estttlGakydldksttvkakidsngkvgllleqkLrpgvtltlsaelDhkknahkfG 270
                  a++++k+sekve+g+e++l+                e+ t++G ky++ +s  ++ ++ds+gkvg++le++L p++tl +s e+Dh + ++k+G
  EPX74157.1 225 IATFWRKLSEKVEAGVECQLSPVGLnrsaammtgpkpEGLTSVGLKYEFAQS-IYRSQVDSKGKVGVYLERRLAPAITLAFSSEIDHPNRNAKVG 318
                 *********************988889999999*******************.*****************************************9 PP

>> GP11  GP11 baseplate wedge protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   1.2e-05      0.11      28      78 ..      87     138 ..      84     155 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1.2e-05
                 ...........TB-T.T---HHHHTTT--S-BHHHHH.HHHHHHH---TTBE CS
        GP11  28 sglfpggrfnfrqavlGdvtidelakGayePnveaai.ndlanaaikdvGti 78 
                 s +f g  + +r++v  d +++ + + a+ Pnv + + ++la aai  +  i
  EPX74157.1  87 STMFGGEPLFLRGSVDNDGAVQAMLNCAWGPNVISKVqMQLADAAIPSMCQI 138
                 6789999999**********************9987758******9877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (353 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       267  (0.0148921); expected 358.6 (0.02)
Passed bias filter:                      247  (0.0137766); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2497.38
//
Query:       EPX74158.1  [L=809]
Description: CorA family magnesium ion transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-42  145.2   0.0    3.9e-42  144.6   0.0    1.3  1  CorA      CorA-like Mg2+ transporter protein
  ------ inclusion threshold ------
      0.028   13.2   0.1      0.041   12.6   0.1    1.2  1  DUF2207   Predicted membrane protein (DUF2207)
      0.067   12.9   2.4       0.17   11.6   2.4    1.6  1  YihI      Der GTPase activator (YihI)


Domain annotation for each model (and alignments):
>> CorA  CorA-like Mg2+ transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.6   0.0   6.5e-46   3.9e-42       2     290 ..     498     801 ..     497     805 .. 0.87

  Alignments for each domain:
  == domain 1  score: 144.6 bits;  conditional E-value: 6.5e-46
        CorA   2 agfvWldlsspteeeleeLaeelgldelaledlldseerprvedyddylllvlpsveldkseeeeeev.plsillgdnflitvrreplealdevikrlk 99 
                 +g+ Wld+ +pt++e++ L++ +++++l++ed+  +e+r +ve +  y ++ ++s+e+d ++e++ e  ++ i++ ++ l+t++ + +     v++r++
  EPX74158.1 498 KGVWWLDCLDPTDSEMRMLSKAFSIHPLTTEDIRVQETREKVELFRSYYFVCFRSFEQDPEGEDYLEPlNMYIIVFREGLLTFHFSSTTHPASVRRRAR 596
                 5778************************************************************99999****************************** PP

        CorA 100 deggk.pkspgellyrlldeivdrlfellekleeeldeledel...edstkkeilrelaqlrrrlvklrralapnrevlkrlla.kaddkll..ddedk 191
                 + ++  + s+ +l y+l+d i+d + +l++++e+e++ +ed +   + +++ ++lr++ + r++   + r l  + +v+k l + +++++++  + e  
  EPX74158.1 597 QLRDYvDVSSDWLCYALIDDITDAFVPLIRAIETETEAIEDSVlvgRLDESCDMLRRIGECRKKTMGMFRLLYGKADVIKMLAKrCNEKWNMapTGEIG 695
                 55554155888999*****************************************************************65555744444442266778 PP

        CorA 192 eylrdlldelerllemlealrerleslqdtyssllser.......lNrvmkvLTvltaiflPlTlitGiyGmNfkglPelewsygypfvlllglmall. 282
                 +yl d++d+l  +   l++  + l++ +++y ++l+ +       +N  + ++T++ ++++P+ litG++GmN++ +P++ +   +  ++++g++ +l 
  EPX74158.1 696 LYLGDIQDHLITMTSNLSQFEKILSRTHSNYLAQLTSNsieensrMNGALGKITLIGTLLVPMNLITGLFGMNVP-IPGQASDTNSSLAWFFGIIGVLv 793
                 99**********************************9999*99********************************.**444444333333444444330 PP

        CorA 283 ailllfwf 290
                 a++++ wf
  EPX74158.1 794 ALVVIGWF 801
                 33344444 PP

>> DUF2207  Predicted membrane protein (DUF2207)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   6.9e-06     0.041     320     428 ..     672     802 ..     657     808 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 6.9e-06
     DUF2207 320 kalldlLfdkseeg.ks..lkeikkyakkskkkakkfkkalkkwksavkk...kergyfdkkgkkklkklsalglgliilglilillallllvll.... 408
                  +++++L +  +e+ +   + ei+ y+ + +++  ++ ++l+++++ + +   ++   +++++ ++  +++ ++  ++++g++l+ + l++  ++    
  EPX74158.1 672 ADVIKMLAKRCNEKwNMapTGEIGLYLGDIQDHLITMTSNLSQFEKILSRthsNYLAQLTSNSIEENSRMNGALGKITLIGTLLVPMNLITGLFGmnvp 770
                 6799999988888877799999*****99999******************9998888888888888888888888888888888888888777779999 PP

     DUF2207 409 ............lvfllilllillliaiivll 428
                               f++i++++++l++i+ ++
  EPX74158.1 771 ipgqasdtnsslAWFFGIIGVLVALVVIGWFV 802
                 9******9986555555555555555555544 PP

>> YihI  Der GTPase activator (YihI)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   2.4   2.9e-05      0.17      19      57 ..     162     200 ..     150     212 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2.9e-05
        YihI  19 erKrkkkrkGlksGsRnneeaskeqkkkskkkkDpRiGS 57 
                   Kr++kr+G+k+ sR+++  +++++ +++  + +R GS
  EPX74158.1 162 SGKRNRKRQGRKPASRHASGLTDSDTYHQAYPRHHRYGS 200
                 46************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (809 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1026  (0.0572257); expected 358.6 (0.02)
Passed bias filter:                      596  (0.0332422); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.70u 0.28s 00:00:00.98 Elapsed: 00:00:00.41
# Mc/sec: 5862.14
//
Query:       EPX74159.1  [L=73]
Description: membrane protein complex assembly protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.9e-11   42.1   0.0      7e-11   42.1   0.0    1.1  1  CBP4      CBP4


Domain annotation for each model (and alignments):
>> CBP4  CBP4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.1   0.0   3.9e-15     7e-11       6      52 ..       3      49 ..       1      65 [. 0.95

  Alignments for each domain:
  == domain 1  score: 42.1 bits;  conditional E-value: 3.9e-15
        CBP4  6 rwlkvllaGgaiigtGvllfkyttPtdeeLikrlsPelrkkyeknre 52
                r  k ll+G++i+g+G++ +k t P+ + ++++lsPelr++yek+++
  EPX74159.1  3 RIVKSLLYGVGIVGSGYVTMKLTAPSPQHVVDSLSPELRADYEKRKN 49
                67899***************************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       333  (0.0185733); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.41
# Mc/sec: 533.81
//
Query:       EPX74160.1  [L=683]
Description: transcription factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (683 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       889  (0.0495845); expected 358.6 (0.02)
Passed bias filter:                      307  (0.0171231); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.25s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 4688.11
//
Query:       EPX74161.1  [L=52]
Description: TOM complex subunit Tom7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.8e-20   70.1   0.6      1e-19   69.9   0.6    1.1  1  Tom7      TOM7 family


Domain annotation for each model (and alignments):
>> Tom7  TOM7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.9   0.6   5.6e-24     1e-19       1      40 [.       8      47 ..       8      48 .. 0.98

  Alignments for each domain:
  == domain 1  score: 69.9 bits;  conditional E-value: 5.6e-24
        Tom7  1 KeriskvidvsktaiHyGfiPlvlyLGfsksePkpslisL 40
                Ker+ kv++v kt++HyG+iP++l+LG+++s Pkp+l+++
  EPX74161.1  8 KERLIKVFNVGKTVTHYGWIPFILWLGYTQSSPKPQLMRV 47
                9*************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       270  (0.0150594); expected 358.6 (0.02)
Passed bias filter:                      250  (0.0139439); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.28s 00:00:00.67 Elapsed: 00:00:00.46
# Mc/sec: 342.52
//
Query:       EPX74162.1  [L=274]
Description: FAD transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.9e-57  190.2   5.0    4.9e-18   64.8   0.2    3.0  3  Mito_carr  Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.8   0.2   2.7e-22   4.9e-18       8      94 ..       3      86 ..       1      88 [. 0.93
   2 !   62.3   0.1   1.7e-21     3e-17       3      91 ..      96     178 ..      95     184 .. 0.94
   3 !   64.4   0.1   3.8e-22   6.8e-18       4      93 ..     185     268 ..     182     271 .. 0.92

  Alignments for each domain:
  == domain 1  score: 64.8 bits;  conditional E-value: 2.7e-22
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHH.HHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
   Mito_carr  8 ellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeG.lrglyrGllpnllrvapasalkfvlyetlkrlll 94
                + +aG+ ag+++tlv++Pld+vK+++q++++ +  s    +l+vl+  +k  G +r+ly Gl++n l++a++++ +f +y ++k l++
  EPX74162.1  3 QAIAGLSAGICSTLVMHPLDLVKVQMQASSNPKGIS----LLHVLRDNLKYTGsIRSLYHGLGVNTLGSAISWGTYFYVYGFTKSLFM 86
                679*************************99998774....9*********77736*******************************97 PP

  == domain 2  score: 62.3 bits;  conditional E-value: 1.7e-21
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   3 lsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkr 91 
                 ++++++l++++lag++ + +t+P++vvK r+ +    +++      + vl++++++eG+rg y G++p+ll+v+ + al+f++ye+lk 
  EPX74162.1  96 ITAIQTLASSALAGCIVAALTNPMWVVKSRILSRTADHSN-----PFYVLYQLLRKEGVRGCYAGFTPSLLGVS-QGALQFMAYEKLKI 178
                 578899***************************9999998.....899*************************9.***********996 PP

  == domain 3  score: 64.4 bits;  conditional E-value: 3.8e-22
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                 s l +l+++++++++a++ ++Pl vv+trlq+ +   +      +ld++k i+k eGl+++y+G+ p llrv+p++ ++f++ye++  ++
  EPX74162.1 185 SNLDYLFMSAASKVFAAINMYPLLVVRTRLQVFRPGLS------TLDMFKAIWKAEGLLAFYKGFQPHLLRVIPQTCITFLVYEQVGLHF 268
                 5677899**************************99987......7***************************************986655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (274 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       264  (0.0147247); expected 358.6 (0.02)
Passed bias filter:                      219  (0.0122148); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1897.52
//
Query:       EPX74163.1  [L=1907]
Description: Pof6 interacting protein Sip1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.12   11.9   4.2        2.8    7.4   0.1    3.7  3  CLASP_N   CLASP N terminal
        4.3    7.9   8.1       0.71   10.4   0.4    3.3  3  YoqO      YoqO-like protein
        4.8    6.9  12.7       0.08   12.7   2.6    3.4  4  RIX1      rRNA processing/ribosome biogenesis


Domain annotation for each model (and alignments):
>> CLASP_N  CLASP N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.1   0.00047       2.8      48     126 ..     380     459 ..     353     472 .. 0.79
   2 ?   -3.7   0.0       1.2   6.9e+03      76     101 ..    1080    1106 ..    1068    1123 .. 0.58
   3 ?    3.2   0.5     0.009        54      44      83 ..    1685    1724 ..    1678    1746 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.00047
     CLASP_N  48 leclk.qlleailkalssLrttlsstgchllkelaiqlkeqldpmveillptLlkllgdtKkiisqnanqalaallsnas 126
                 le+l  ++le +++  +++  tl++++++ +  ++  lk ++ p  ++ll +L+++++   ++  +na+ +l +ll  ++
  EPX74163.1 380 LELLLsKVLEPFVEDQTKVPITLVQAALSSITGILANLKGSVTPHHNNLLRVLFDMISLGNDRLKNNAAWCLRCLLIVMP 459
                 444433567777777777778999***************************************************99887 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 1.2
     CLASP_N   76 llkelaiqlkeq.ldpmveillptLlk 101 
                  llk+++ + ++   d+ +e l+++Ll+
  EPX74163.1 1080 LLKNVIDVKHPTiRDSAIEVLYQILLQ 1106
                  455555555555223335555555554 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.009
     CLASP_N   44 veelleclkqlleailkalssLrttlsstgchllkelaiq 83  
                   +ell++l++ll  ++++ +s+ +tl+ t+ + l  +++ 
  EPX74163.1 1685 KHELLAVLRKLLSTMVTQDNSICSTLCYTLFEHLYSMLEN 1724
                  5799*************************99877776655 PP

>> YoqO  YoqO-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1      0.17   9.9e+02      39      71 ..     293     325 ..     282     351 .. 0.77
   2 ?   -2.5   0.3       1.2   7.3e+03      78     104 ..    1550    1576 ..    1501    1578 .. 0.67
   3 ?   10.4   0.4   0.00012      0.71      10      80 ..    1689    1758 ..    1686    1773 .. 0.73

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.17
        YoqO  39 vllYnwDelKkySkkslivlsitlvilvllivf 71 
                   lYn   +K+   k l++++i+ ++l     +
  EPX74163.1 293 LELYNHKYAKSEASKGLVIFAIKHFFLLQDYNK 325
                 56999999*************999888765555 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.2
        YoqO   78 elidklsifqglltiakilyiivvlvi 104 
                  +l+ +l + ++++t + i++ +  l++
  EPX74163.1 1550 DLLIRLILTEDWETKISIVLFVKELAL 1576
                  556677888999999999998877766 PP

  == domain 3  score: 10.4 bits;  conditional E-value: 0.00012
        YoqO   10 lslllsvvlksflknesianiivigv..lifvllYnwDelKkySkkslivlsitlvilvllivflllkgqeli 80  
                  l++l ++++ + ++ +si  +++ ++   ++ +l n+D+++++ kk++i+ls+ lv   l+i+  ll g++li
  EPX74163.1 1689 LAVLRKLLSTMVTQDNSICSTLCYTLfeHLYSMLENKDQAQSKDKKEIILLSMVLV---LTIAAPLLDGEQLI 1758
                  56666788888999999999999998444677777888888888888888886555...55666666776665 PP

>> RIX1  rRNA processing/ribosome biogenesis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.1       1.4   8.6e+03      99     120 ..     398     419 ..     379     437 .. 0.54
   2 ?   -3.1   0.0      0.94   5.6e+03      70     124 ..     839     892 ..     836     893 .. 0.81
   3 ?   -3.6   0.1       1.3   7.8e+03     111     162 ..    1216    1270 ..    1204    1273 .. 0.56
   4 ?   12.7   2.6   1.3e-05      0.08      68     164 ..    1695    1792 ..    1689    1808 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 1.4
        RIX1  99 dppavlelaistlsriftltrg 120
                  p +++++a+s+++ i+ +++g
  EPX74163.1 398 VPITLVQAALSSITGILANLKG 419
                 3455555566666665555544 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 0.94
        RIX1  70 kvtveesgeellssgstWlrallsiLekpdppavlelaistlsriftltrgkptl 124
                 kv +e  +  l s+  +++  ll i ++ d  ++++l  ++ s++  l +gkpt+
  EPX74163.1 839 KVFCE-KRLSLSSKVVSLFIELLDINSNCDDITIIRLFAESYSFLALLCQGKPTF 892
                 66677.5577777777888888888788899999999999999999999999998 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 1.3
        RIX1  111 lsriftltrgkptltREiltpnlpkfitallqlleee....letvlealstllplh 162 
                  ++ i + +++ ++ +R + +  ++ +i   + l+ ++     e+ l++l tl+ ++
  EPX74163.1 1216 ITCISDVMSSSSDASRYLISR-ISDLIRLAFILSTSDnfylKESGLKLLDTLIMNF 1270
                  444444455555555555555.5555555555555445666666666666666666 PP

  == domain 4  score: 12.7 bits;  conditional E-value: 1.3e-05
        RIX1   68 LakvtveesgeellssgstWlrallsiLekpdp.pavlelaistlsriftltrgkptltREiltpnlpkfitallqlleee..letvlealstllpl 161 
                  L+ ++v++   ++ + + t+++ l+s+Le++d+ ++  +  i++ls ++ lt   p l  E l    ++fit+l+ ll+++    t+ +++s+ll +
  EPX74163.1 1695 LLSTMVTQDNSICSTLCYTLFEHLYSMLENKDQaQSKDKKEIILLSMVLVLTIAAPLLDGEQLII--QNFITTLFGLLKSSeeFRTAAKCISSLLLA 1789
                  77888999999********************773666688999***************9998876..************8899************99 PP

        RIX1  162 hPt 164 
                  ++ 
  EPX74163.1 1790 NSK 1792
                  875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1907 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       666  (0.0371465); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.98u 0.29s 00:00:01.27 Elapsed: 00:00:00.48
# Mc/sec: 11840.79
//
Query:       EPX74164.1  [L=289]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.4e-32  111.9   2.9    4.5e-32  111.5   2.9    1.1  1  DUF1640   Protein of unknown function (DUF1640)
  ------ inclusion threshold ------
      0.056   12.9   1.7       0.22   11.0   1.7    1.8  1  MSC       Man1-Src1p-C-terminal domain
      0.092   12.6   2.2       0.63    9.9   1.1    2.2  2  EssA      WXG100 protein secretion system (Wss), protein EssA


Domain annotation for each model (and alignments):
>> DUF1640  Protein of unknown function (DUF1640)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.5   2.9   7.6e-36   4.5e-32       1     168 [.      78     245 ..      78     251 .. 0.97

  Alignments for each domain:
  == domain 1  score: 111.5 bits;  conditional E-value: 7.6e-36
     DUF1640   1 fDThalvrrLeekGftkeqAeaimsaltevlneslekvakslvskselekseylqkaalselrkevqisersefaalrseteklqreleklkqkLreei 99 
                 fDT+++++ L e+Gf++++Aea  ++++  ++e l++ + +++s ++ e+ +yl++ alselr+e  ++++ ++++lr+   + qre+e l+q ++e++
  EPX74164.1  78 FDTYSFFKTLVEGGFNEKEAEAFLDITNMFITELLRHSHMTYLSEADFENFSYLFRTALSELRSEKINMRKDQISTLRAGLFSNQREVEGLEQLVNEHL 176
                 9************************************************************************************************** PP

     DUF1640 100 dklkadirldlnleKgrireelakleakiqelnnkidrevsalrteiEsvKldvikyliglvvgilavg 168
                 +kl  + +++++++K+++r++ ++l+aki el+n ++ ++ +lr+e E+ K++ i++++ +v+++   +
  EPX74164.1 177 NKLGTESKMEFENRKNDTRNDVQQLSAKIVELHNLLSVSLGKLRAENEKQKWEQIRKAAVVVMSFTGFL 245
                 ***********************************************************9998876544 PP

>> MSC  Man1-Src1p-C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   1.7   3.7e-05      0.22     135     250 ..     145     263 ..      91     276 .. 0.57

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 3.7e-05
         MSC 135 glseeeLkeslsekksksiskeefeelwkealkeLkkeeeivvredseseseksskekkkllrstslaklslkcrlrrsvretlaryrll...llglll 230
                 ++ ++++ +      s++ + e +e+l++e l++L +e ++ ++++++ ++++ ++ + k++  ++l ++sl +    + ++ +++ r+    +++++ 
  EPX74164.1 145 NMRKDQISTLRAGLFSNQREVEGLEQLVNEHLNKLGTESKMEFENRKNDTRNDVQQLSAKIVELHNLLSVSLGKLRAENEKQKWEQIRKAavvVMSFTG 243
                 233333332222233333444455555555555555555555555555555577777888888888888888775555666666666666222444555 PP

         MSC 231 llllilylrsrlrsrraeke 250
                 +l+l++ l  r+rs+++e++
  EPX74164.1 244 FLVLVIPLGLRFRSKKKEQA 263
                 57777888888888887775 PP

>> EssA  WXG100 protein secretion system (Wss), protein EssA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   1.1   0.00011      0.63      42     122 ..     127     204 ..     116     216 .. 0.73
   2 ?    1.6   0.1     0.036   2.2e+02     106     136 ..     221     249 ..     191     260 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00011
        EssA  42 aaieLFteeveeeinkkkkaEkkeieelkdsLFeeekesneavkdtkesLFsseYevrasasevassetaeEesisktksk 122
                 ++  LF + ++e   +k +  k++i  l+  LF++++e +   + ++e L +   e++    e ++ ++ + +++++ + k
  EPX74164.1 127 NFSYLFRTALSELRSEKINMRKDQISTLRAGLFSNQREVEGLEQLVNEHLNKLGTESKM---EFENRKNDTRNDVQQLSAK 204
                 56789********************************9985555566665544443333...5555555555555555455 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.036
        EssA 106 assetaeEesisktkskiiilliaggvvala 136
                 a++e ++ e+i+k+   ++++ ++g +v+++
  EPX74164.1 221 AENEKQKWEQIRKA--AVVVMSFTGFLVLVI 249
                 67778888888888..899999999888754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1047  (0.058397); expected 358.6 (0.02)
Passed bias filter:                      530  (0.029561); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 2008.27
//
Query:       EPX74165.1  [L=925]
Description: pig-O [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.4e-15   55.4   0.2    1.1e-14   54.8   0.2    1.2  1  Phosphodiest   Type I phosphodiesterase / nucleotide pyrophos
    1.6e-07   30.9   0.1    2.6e-07   30.3   0.1    1.2  1  Metalloenzyme  Metalloenzyme superfamily
    0.00047   19.7   0.0      0.002   17.6   0.0    1.8  2  Sulfatase      Sulfatase
  ------ inclusion threshold ------
      0.087   13.0   0.1      0.087   13.0   0.1    1.8  2  KIP1           KIP1-like protein
          7    7.3   5.1         22    5.7   0.4    3.5  3  SelK_SelG      Selenoprotein SelK_SelG


Domain annotation for each model (and alignments):
>> Phosphodiest  Type I phosphodiesterase / nucleotide pyrophosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.8   0.2   3.1e-18   1.1e-14     128     248 ..     193     300 ..     110     319 .. 0.78

  Alignments for each domain:
  == domain 1  score: 54.8 bits;  conditional E-value: 3.1e-18
                   TBHHSBTCT.CSTTSCHHHHHHHHHHHHHHHCHTHSHHHHHCTSSESEEEEEECCCHHHHHHH-TTSHHHHHHHHHHHHHHHHHHHHHHHTTGTTTE CS
  Phosphodiest 128 etppryleddfnakvpledkvdkavlqtwldaafakvvlekelekpdlllvyleetDtvgHkfGpdspevedalrrvDkaigdLlealderglsaet 224
                      ++y++++f+  vp  + vd++v + ++d  + +       + +d l+ ++ ++D+vgH++Gp++p+++++l++ D++i+++++++d++     t
    EPX74165.1 193 FLNQTYSRPAFSFNVPDLHGVDQKVNKYLFDYIE-H-------KPWDILIAHYLGVDHVGHRLGPNHPTMTEKLKEMDECIKRMMNLIDDD-----T 276
                   5567777778888886666666545534444444.6.......9***********************************************.....* PP

                   EEEEEES---EEEHTTSEEEGGGT CS
  Phosphodiest 225 niilvSDHGmadvsddkvielndl 248
                    +++++DHGm +  +++ + ++++
    EPX74165.1 277 LLLVMGDHGMDSKGNHGGDAFDEI 300
                   **********98755556666555 PP

>> Metalloenzyme  Metalloenzyme superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.3   0.1   7.2e-11   2.6e-07     117     191 ..     215     290 ..     196     296 .. 0.84

  Alignments for each domain:
  == domain 1  score: 30.3 bits;  conditional E-value: 7.2e-11
                    HHHHHHHHHHH.CC.-SEEEEEE-HHHHHHHTT-HH..HHHHHHHHHHHHHHHHHTTS-TTTEEEEEE-SSB--TTT CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Metalloenzyme 117 vevaekaldailsgkfdlvvvniknaDmvGHtgdle..atiaaieaaDeavkeildaieqvdgilvvtADHgnaedm 191
                    ++v + + d i+++  d+++ ++   D vGH+  ++     + ++++De++k++++ i+++  +l+v++DHg +++ 
     EPX74165.1 215 QKVNKYLFDYIEHKPWDILIAHYLGVDHVGHRLGPNhpTMTEKLKEMDECIKRMMNLIDDDT-LLLVMGDHGMDSKG 290
                    456677899**********************97554116789*************9998877.*********99875 PP

>> Sulfatase  Sulfatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.24   8.5e+02       4      91 ..      83     173 ..      81     183 .. 0.69
   2 !   17.6   0.0   5.6e-07     0.002     208     258 ..     230     292 ..     182     339 .. 0.67

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.24
                 EEEEESSE-TT......GSGGGTTTSCSSHHHHHHH.HTSEEESSEE-SSSSHH.HHHHHHHHSS-HHHHTHSSCCSTTTHHCTTTS-HHHHHHHH CS
   Sulfatase   4 vliladdlgag......dlglyggktattpnldrla.eeglrftnfysaaplcs.psraalltgryphnsgvasntevgggglpqteatLpellke 91 
                 v++++d l+++      d ++y +   +tp+ +++   e  ++ +f++ ap+++ + +  l tg  p+  +v+sn      g + +e++L+  +k+
  EPX74165.1  83 VIVVIDALRYDflipsnD-SFYYHNALNTPYETSIShPEHSILLQFLADAPTTTsQRLKGLTTGSLPTFIDVGSNF----AGTNVDEDNLLYQWKS 173
                 899999999999999854.555555556999999988666666677776666550555677778887777777665....5666666666665555 PP

  == domain 2  score: 17.6 bits;  conditional E-value: 5.6e-07
                 H..................HHHHHHHHHHHHHHHHHHHHHHHHHHTTTGGGEEEEEEESSSSCCCGHHT CS
   Sulfatase 208 r..................qlleaylnsveyvDdligrvlaaLeenglldntlvvftSDhgasleesng 258
                 +                   ++ +    ++++D++i+r ++ +     +d+tl+++++Dhg   ++ n+
  EPX74165.1 230 WdiliahylgvdhvghrlgPNHPTMTEKLKEMDECIKRMMNLI-----DDDTLLLVMGDHGMDSKG-NH 292
                 3555555556666666666778888899***************.....*************98855.22 PP

>> KIP1  KIP1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   2.4e-05     0.087      14      38 ..     252     276 ..     245     284 .. 0.87
   2 ?   -3.7   0.3       3.8   1.3e+04      59      73 ..     374     385 ..     371     386 .. 0.51

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2.4e-05
        KIP1  14 kwLqetlseldekvkemlklieeda 38 
                 + + e+l+e+de +k+m++li++d 
  EPX74165.1 252 PTMTEKLKEMDECIKRMMNLIDDDT 276
                 567899***************8885 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 3.8
        KIP1  59 veefyrsyrsLaery 73 
                 +   +r yrs  +ry
  EPX74165.1 374 I---NRFYRSYEHRY 385
                 4...45555555555 PP

>> SelK_SelG  Selenoprotein SelK_SelG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0         1   3.6e+03      17      39 ..     413     440 ..     409     459 .. 0.75
   2 ?    5.7   0.4    0.0063        22      21      47 ..     575     601 ..     571     616 .. 0.82
   3 ?    1.1   0.1      0.18   6.4e+02      26      40 ..     818     832 ..     797     840 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 1
   SelK_SelG  17 rlsiitdffwgivnfivlF.....fqtL 39 
                 + ++i+++f +i+  + l+     f +L
  EPX74165.1 413 SSKRIFEYFKSIWAEFSLLpmltgFVSL 440
                 5678999999999888877555555555 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0063
   SelK_SelG  21 itdffwgivnfivlFfqtLlspdlskn 47 
                 ++  fw+i+ +i +Ff++ + +  +++
  EPX74165.1 575 LKSSFWSILFIILQFFTSYITNCREEQ 601
                 5678**************988766555 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.18
   SelK_SelG  26 wgivnfivlFfqtLl 40 
                  ++++ i +Ff+tL 
  EPX74165.1 818 NQVISGILMFFHTLG 832
                 468999*******95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (925 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       671  (0.0374254); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.68u 0.29s 00:00:00.97 Elapsed: 00:00:00.45
# Mc/sec: 6207.67
//
Query:       EPX74166.1  [L=480]
Description: WD repeat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.9e-20   70.6   1.4    4.3e-11   41.7   0.1    2.6  2  CRT10        CRT10
      1e-05   26.2   0.2    5.2e-05   23.9   0.0    2.4  2  WD40         WD domain, G-beta repeat
  ------ inclusion threshold ------
      0.019   13.6   0.1        1.6    7.3   0.0    2.1  2  Nup160       Nucleoporin Nup120/160
      0.034   14.5   0.1        1.3    9.4   0.0    2.6  3  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain


Domain annotation for each model (and alignments):
>> CRT10  CRT10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.7   0.1   9.6e-15   4.3e-11      22     218 ..       4     201 ..       1     255 [. 0.83
   2 !   27.2   0.1   2.3e-10     1e-06     554     628 ..     323     397 ..     299     402 .. 0.85

  Alignments for each domain:
  == domain 1  score: 41.7 bits;  conditional E-value: 9.6e-15
       CRT10  22 tfpvekfrdrlrveglg...........FkNNlaviie.rsvlfiaagseieifdldkls.al..sktkvvlreytkpsqvkledrlistsp.nphtin 104
                 +  v++f +rl ++ ++           F N l++ ++  +++f+a g+++ +++l   + +l  ++  +vl    k+s ++    +    p +p  in
  EPX74166.1   4 EILVNEFLNRLDYSVCElfklgekpfqlFRNSLVACSKlIDYMFVAIGEDVFVYNLLLFPiDLsePDPLMVLHCPHKSSSIQ----QGDLFPgMPNGIN 98 
                 4568899********99*********************9****************976542330044444455555555555....5556699****** PP

       CRT10 105 flkivnflGqevLvaciddGivllwevstiikefkkfssdidegtsrikikPdlklrleasvWslDvidydsislialsdnsqgitllaydkd...ker 200
                  +++  +   e+L+   d G v ++       ++k+         +r   +P +++ +++s+W++ +    s  ++a+s+n+++i ++  + d   ++r
  EPX74166.1  99 HIRCELLGDLEYLITATDCGKVAMY-------DVKNL--------QR---NP-MTFSVDSSAWGIAI---SSERYLAISSNAHVINIFNLSTDykqCKR 175
                 **98877778***************.......33444........34...45.9***********95...5*****************99988888999 PP

       CRT10 201 fyiek.....eiq...tshnvPcvsf 218
                  y ++     + +     hn+Pcvsf
  EPX74166.1 176 DYRSPwfrqeSLElvgHQHNIPCVSF 201
                 999999876544477789******** PP

  == domain 2  score: 27.2 bits;  conditional E-value: 2.3e-10
       CRT10 554 esdeflvvtTakklyLvradp..LivnsaTkeiFpledvftceskssnRisivchIkeLsciivasqlGLisllRLt 628
                 + +e++v  T+ +++L++ +   ++   ++++ F+  d+ t  ++ + Ri++  +++++   ++a+q+G +s+lRL 
  EPX74166.1 323 PPEEIFVFATKYSVVLCGYHKsqIYPFVSCRNCFE--DPSTIRFEGLHRINMMEYVPQIQSLVCATQSGQLSILRLI 397
                 5689*************987522666677889996..6*************************************95 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.0   1.2e-08   5.2e-05       4      38 .]     186     221 ..     183     221 .. 0.88
   2 ?   -2.5   0.1       2.5   1.1e+04       6      18 ..     230     242 ..     225     248 .. 0.55

  Alignments for each domain:
  == domain 1  score: 23.9 bits;  conditional E-value: 1.2e-08
                 EEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 
                   +l GH++ + +++f++ g++l+sGs D+t+ +Wd
  EPX74166.1 186 SLELVGHQHnIPCVSFNSKGNLLLSGSIDRTLQLWD 221
                 55788**556*************************9 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 2.5
                 EEESS..SSEEEEEE CS
        WD40   6 tltGH..ssvtslaf 18 
                 +   H   +++s++f
  EPX74166.1 230 K--FHtkVWIWSVKF 242
                 4..353234778754 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.0   0.00035       1.6     229     257 ..     204     232 ..     174     254 .. 0.81
   2 ?    4.1   0.0    0.0032        14     125     183 ..     342     404 ..     325     422 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.00035
                 TTTEEEEEETT-EEEEEETTTTEEEEEEE CS
      Nup160 229 gqtylfalsrdgkLrvWnlltgkclatid 257
                 + ++l++ s d++L++W+++ ++cl+ + 
  EPX74166.1 204 KGNLLLSGSIDRTLQLWDINELSCLSKFH 232
                 77899999****************99765 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.0032
                 TT----S..TSBEEB-SSGT.TTS-EEEE....EE-SSSEEEEEETTS-EEEEEEETTEEEEE CS
      Nup160 125 skailndldewckidspsslstsskpgrl....aavssnellvsladggllklkrdedggawk 183
                 +k++++ + + + + +++s + +   +r     ++++ + l++++++g+l +l++  + + ++
  EPX74166.1 342 HKSQIYPFVSCRNCFEDPSTIRFEGLHRInmmeYVPQIQSLVCATQSGQLSILRLIATEKVIS 404
                 57777888888777788888899999999999*********************9976655555 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       2.7   1.2e+04      52      69 ..     110     127 ..     107     130 .. 0.81
   2 ?    9.4   0.0   0.00029       1.3      36      79 ..     191     234 ..     151     244 .. 0.87
   3 ?    2.0   0.0     0.057   2.6e+02       1      29 [.     373     402 ..     368     415 .. 0.74

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 2.7
  ANAPC4_WD40  52 lLavaysdgevrlldaes 69 
                   L  a++ g+v ++d+++
   EPX74166.1 110 YLITATDCGKVAMYDVKN 127
                  577888899999999987 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00029
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvk 79 
                  ++++++ +++++ +g+lL  +  d +++l d+++  +++++++k
   EPX74166.1 191 GHQHNIPCVSFNSKGNLLLSGSIDRTLQLWDINELSCLSKFHTK 234
                  6788999****************************999999876 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.057
  ANAPC4_WD40   1 lswcptmDLiAlatedgellvfRl.ngqrv 29 
                  +++ p+   +  at++g+l + Rl   ++v
   EPX74166.1 373 MEYVPQIQSLVCATQSGQLSILRLiATEKV 402
                  567777777888888888888887444555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (480 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       379  (0.0211389); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.55u 0.30s 00:00:00.85 Elapsed: 00:00:00.45
# Mc/sec: 3184.64
//
Query:       EPX74167.1  [L=820]
Description: eukaryotic protein implicated in cell cycle regulation [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-79  268.0  14.8    3.7e-47  161.5   4.4    2.2  2  DUF3402   Domain of unknown function (DUF3402)
      3e-41  141.5   0.9    5.6e-41  140.6   0.9    1.5  1  N1221     N1221-like protein


Domain annotation for each model (and alignments):
>> DUF3402  Domain of unknown function (DUF3402)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.3   2.6   3.4e-36     3e-32       1     245 [.     377     618 ..     377     623 .. 0.86
   2 !  161.5   4.4   4.1e-51   3.7e-47     314     460 ..     629     807 ..     619     809 .. 0.86

  Alignments for each domain:
  == domain 1  score: 112.3 bits;  conditional E-value: 3.4e-36
     DUF3402   1 PasilEAgelfskrvrmtramrqlweerekflkfergweeddeeedddleeltleekeeeeeevdegpkkeelseeekkrleavekfYkeaLphLqslv 99 
                 P+si+EA el++++ +++  ++ql+ ere++ +++ +     + +d  +e+l+ +++               + + ++ +++ ++k Y++++ hL+ +v
  EPX74167.1 377 PKSITEATELLHRQSKHNNIVEQLMFEREYLRHCTHQSYLGCNFNDA-VESLNFSHE---------------KATVDDPTISFISKTYDDLFLHLDVFV 459
                 9********************************99998887655554.666655532...............33456778999**************** PP

     DUF3402 100 ivllklilanvt...alvtq.....qskakeqsinilaaelseeeelseksasgreknk.kkgeak....elskeeldaartrEitlkAvsgillllLK 185
                 ++ ++l++++++   +l+ +     +++ ++qsin++a ++s++ee+se+  ++ ek++ ++ +       +s + l  ++t+E++l+++s+++l++LK
  EPX74167.1 460 QLSMHLFYYTSKkvnKLYIEafsssEAAMQMQSINDMAVADSPSEEISEPVIKPLEKDSvNELNDLatgfFVSGNILYSIDTCELILYSLSSLFLMMLK 558
                 ********9998444344447776567779************************9999853333336777888899999******************** PP

     DUF3402 186 wfklshvlkfeyltqlLldsnylpLvlklfahqdvqqvveskndreelsFFqfcnlrske 245
                 w++lshvl++e++++lL+d+++l+++ ++f++++ + ++e+ ++    +FF+f++++ k+
  EPX74167.1 559 WLRLSHVLRSERIAKLLYDNHFLEILSRYFSDNESSMHAERDMKCLRGGFFTFTAKSYKQ 618
                 ****************************************99999999******997765 PP

  == domain 2  score: 161.5 bits;  conditional E-value: 4.1e-51
     DUF3402 314 dfswrnffslinlLrilqkicknkahRnllLvqyksseiLkkaLkvpqpeLrlytLKllKnqvpYcGrkWrqsNMrvitaiYlhcrpeLrDdWlagsdv 412
                 + s rn+++++n+Lr+  kick++++R+ +Lv+ +++++Lk++L++p++ L+ y LK+lK +vpY+G kW+q+NM++it+iYlhc+++LrD+W++ ++ 
  EPX74167.1 629 SPSYRNILITLNCLRVTGKICKYHNNRKETLVKVDMQNHLKRLLEIPHEILKRYALKVLKLHVPYLGVKWKQANMNIITSIYLHCPLSLRDSWIFPENN 727
                 679************************************************************************************************ PP

     DUF3402 413 daeveealplEqaLrglthwfnlrrYpdkm................................aaeeraalreeqdffkre 460
                  ++ +++  ++ +L++l+++++ r Y + +                                a  + a  +e  dff +e
  EPX74167.1 728 LETQRSSKLQDAFLCILIRFYHKRLYGKVCnklydlnvleeirlkrtieelvesnmmenlpdAMWTYAENSETPDFFDNE 807
                 ******************************77777777777777666666666666555443222223333556666666 PP

>> N1221  N1221-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.6   0.9   6.2e-45   5.6e-41       3     289 .]      31     309 ..      29     309 .. 0.92

  Alignments for each domain:
  == domain 1  score: 140.6 bits;  conditional E-value: 6.2e-45
       N1221   3 ydFeykdsdsleeEldeWFsysdvvlllkakkaFeskweevse.....eeeeWedvdederkkfverlleslessdkaRlealeallYialGtwgetks 96 
                 ++Fe +  d+++++ld +F++++   + +a ++F+sk + +++     ++ eW d++ + +k+f++++ e+les ++ R  a  ++lY++ G+++ +k+
  EPX74167.1  31 VEFEGTFEDDWKDDLDGFFDSEEE-FFITAGRVFYSKLRVFQSvrnsgSKLEWSDLPLTIKKEFISQCREELESGKTLRNGAFYTILYLCAGVYDCVKD 128
                 7899999**************985.5559***********988*****999**********************99999********************* PP

       N1221  97 tseqleaikenvkllreagglealwealkkafekeredsedekkaeeqqlqeesselallltilYllvevareeseddeelreellelepnllqflvel 195
                  +e+ ++i++n++llr++++ +++++++ ++  + +           ++  +e++ l l+l++++++++v  +   + +e++e + +l+p+l++ lv+l
  EPX74167.1 129 LNEHFQSIERNIELLRSFQIPSIIYSIFTNWNTNRKPGY--------MSDLKEKELLTLFLSLIFFFLTVPSS---NYSEWIECARSLQPSLMSSLVQL 216
                 *******************************99888887........444444789****************9...8********************** PP

       N1221 196 iaklrw......ddakslplkkillLlwKllLlvfGgteelkevkkalrelhglseeskekekkplitasPldYhaFrqeitskYPaynppepllplea 288
                 +++  +      d+ + +pl++i +L++K+++ ++G++++++  k+ + +l++    s+++       ++ ldY++Fr+e+ +kY  +  p + lpl++
  EPX74167.1 217 FNDTMNeyemdlDNVSLFPLRQITFLIYKVCFRLWGTETDFQDKKSGIGNLNNN--TSSNR-----PHTTILDYEVFRHEVATKYSFFARPFYSLPLDR 308
                 **9998788888899***********************************7765..23333.....34677*************************987 PP

       N1221 289 e 289
                 e
  EPX74167.1 309 E 309
                 6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (820 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       688  (0.0383736); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.29s 00:00:00.96 Elapsed: 00:00:00.45
# Mc/sec: 5432.75
//
Query:       EPX74168.1  [L=332]
Description: C-5 sterol desaturase Erg32 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      7e-22   78.2  21.1      7e-22   78.2  21.1    2.1  2  FA_hydroxylase  Fatty acid hydroxylase superfamily


Domain annotation for each model (and alignments):
>> FA_hydroxylase  Fatty acid hydroxylase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.1     0.022   3.9e+02      52      86 ..      61      84 ..      10     113 .. 0.47
   2 !   78.2  21.1   3.9e-26     7e-22       2     132 ..     158     283 ..     157     284 .. 0.88

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.022
  FA_hydroxylase 52 alllallllllllllgplsalllvlvlaallelli 86
                     ++ +            +s++l+++v+++l +++ 
      EPX74168.1 61 NIFRQG-----------ISLFLITWVMGTLSYFVS 84
                    222222...........222333334433333332 PP

  == domain 2  score: 78.2 bits;  conditional E-value: 3.9e-26
  FA_hydroxylase   2 llallledfveYwvHrllHrvkllwrrlHkvHHsseaptalaalrahplealllallllllllllg.plsalllvlvlaallelliHsglhvslg 95 
                     +l+ll+ df+ Yw+Hr lH+ +++++ lHk+HH+   pt+++++++h+l+   + l++ l  ++++ +  ++ll++   +++++liH g+ +s  
      EPX74168.1 158 ILFLLFSDFLIYWIHRGLHH-PWFYAPLHKLHHKWIIPTPFSSHAFHFLDGYSQSLPYHLFPFFFPlNKYLYLLLFGSVNYWTVLIHDGKYFSN- 250
                     799*************8887.6*********************************7777555555549999999***************42222. PP

  FA_hydroxylase  96 wllerllatpraHrlHHskneegnfgvllslwDrlfg 132
                        + +++++++H  HH +++ +n+g++++l+Drl+ 
      EPX74168.1 251 ---NAVINGAAHHASHHMYFN-YNYGQFFTLFDRLCS 283
                     ...4569**************.*************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (332 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       908  (0.0506442); expected 358.6 (0.02)
Passed bias filter:                      509  (0.0283898); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.45
# Mc/sec: 2222.13
//
Query:       EPX74169.1  [L=115]
Description: hypothetical protein SOCG_03381 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       227  (0.0126611); expected 358.6 (0.02)
Passed bias filter:                      202  (0.0112667); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 799.74
//
Query:       EPX74170.1  [L=321]
Description: Mdm10/Mdm12/Mmm1 complex subunit Mmm1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.5e-87  291.1   1.2    1.1e-84  284.4   1.2    2.0  1  MMM1      Maintenance of mitochondrial morphology protein 1
  ------ inclusion threshold ------
       0.22   11.6   0.0       0.38   10.9   0.0    1.4  1  DUF357    Protein of unknown function (DUF357)


Domain annotation for each model (and alignments):
>> MMM1  Maintenance of mitochondrial morphology protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  284.4   1.2   1.2e-88   1.1e-84       1     328 [.       7     304 ..       7     308 .. 0.85

  Alignments for each domain:
  == domain 1  score: 284.4 bits;  conditional E-value: 1.2e-88
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXX.XXXXX-HHH........HHHHHHHHTTT--TTT CS
        MMM1   1 lsftqGllvGqlsvvllliifikffifgeasskeskasskaaerlssskkklssvikkkkkekeessedleekkssnvveessakiesiLektyYdves 99 
                 +sftqG+++Gql  + ++ +f++ff+f + ++++  +++++ e  ++++++++    +++ + ++     + +  ++  ++++++++s +  + Y+v++
  EPX74170.1   7 WSFTQGFILGQLLTISVIYVFLRFFLFCNPPPQDLAKEEEKIE--AIKSQQAKP-SPTSSPDVAN----VTDN-ARHYFQDTHSTLDSEFLDALYNVNE 97 
                 9******************************999888765444..222112111.1111111111....1111.12234556667777777799***** PP

                 S--B--HHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHH.GGCS-TTEEEEEEEEEE--S---EEEEEEE.EE-TTTTSS-EEEEEEEEEEEEEEEEEE CS
        MMM1 100 hqpesLDWfnvLiaqtiaqfreealekdnilksLnealn.seelpdyldkikvteidlGedfPifsncriikeskesekkrLeakidvdlsDtltlgie 197
                 h+pesLDWfnvLiaq ++qfr++a +++  l+ L+++ln  ++    +d+i v +++lG  fP+fs cr+++  +e+ +++L+a++ v l D+lt ++e
  EPX74170.1  98 HEPESLDWFNVLIAQALTQFRHDASSNNVALRRLEAVLNkGTQDRTMVDHIYVKNLSLGRGFPVFSHCRVLR--REEGSSHLRAEMLVSLKDNLTCTVE 194
                 ***************************************77788899***********************65..566799******************* PP

                 EEEEESSSSSSEE---EEEEEEEEEEEEEEEEEE...E--SSS-...-S--------...---S-EEEEEE-SS-EEEEEEEEESSSSTT-TTHHHHHH CS
        MMM1 198 tkLllnyPkpltavLPvalavsvvrfsgtLtvslipstkaeelvkeeeeeeeeeeeeeeeeeegtalvfsflpdyrldlsvksliGsrsklqdvPkias 296
                 tkLlln+Pkp +a+LP+++++s+ rf g + + + ps+                       +++ ++ fsf pd+ + l+v+sliG+rsklqd+Pki++
  EPX74170.1 195 TKLLLNFPKPSFATLPLSITISMRRFVGKMMIHFSPSNG---------------------ADQPAYFNFSFDPDFVFSLEVNSLIGARSKLQDIPKITQ 272
                 **********************************66333.....................2357799******************************** PP

                 HHHHHHHHHHHHHHBTT-EEEEE----S--GG CS
        MMM1 297 lvearlkkWfeercvePrfqvvklPslWPrkk 328
                 l+++r+++Wf+ rcv P+fq++++P++WP + 
  EPX74170.1 273 LIDSRVRQWFIARCVSPQFQQIAIPNFWPTSA 304
                 *****************************875 PP

>> DUF357  Protein of unknown function (DUF357)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   4.2e-05      0.38       5      46 ..      43      85 ..      39      95 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 4.2e-05
                HHHHHHHHHH.....TS---HHH.HHHHHHHHHHHHHHHHHHH CS
      DUF357  5 lleealekvkiapdeesplgeaa.eevlemaesYleDakyfle 46
                + ee++e +k ++ + sp +     +v ++a++Y++D+   l+
  EPX74170.1 43 KEEEKIEAIKSQQAKPSPTSSPDvANVTDNARHYFQDTHSTLD 85
                67999*****999888888877669************987776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       614  (0.0342462); expected 358.6 (0.02)
Passed bias filter:                      531  (0.0296168); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 2332.04
//
Query:       EPX74171.1  [L=300]
Description: double-strand siRNA ribonuclease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.5e-18   65.3   0.0    4.4e-17   63.1   0.0    1.9  1  RNase_T   Exonuclease
    0.00048   19.8   0.4    0.00093   18.9   0.4    1.5  1  SAP       SAP domain


Domain annotation for each model (and alignments):
>> RNase_T  Exonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.1   0.0   4.9e-21   4.4e-17       2     164 ..      68     260 ..      67     261 .. 0.90

  Alignments for each domain:
  == domain 1  score: 63.1 bits;  conditional E-value: 4.9e-21
                 EEEEEESSSTT...CTTS-EEEEEEEEEETTCCEEEEEEEEEEEHSSHCSSSHHHHHHHHHCHHHHHTCEBHHHHHHHHHHHHHHH............. CS
     RNase_T   2 viDlEttglda...kekdeiieiaaisidggeneigetfhfyvkptelakltdecteftgitqemldeapsfkevleefkellrkl............. 84 
                 ++D+E+t+ +    +  +eiie+++   d ++nei+++fh+yv+p  ++ l+d+c ++tgi q  +dea  f++vle + e+lr+              
  EPX74171.1  68 IVDVEATCEEGcgfTFDNEIIEFPCLLYDLDTNEIIDEFHSYVRPNMNPILSDYCKSLTGIQQSVIDEASPFQQVLENLTEFLRQHkailepsidevki 166
                 89************778*******************************************************************88************* PP

                 ..............TCCCETTTCEEEESSHHHHHHHHHHHHH..HHHHCSEHCECHHHHHHHHHCHHHHHHHHHTTCHSSSSTSSHHHHHHHHHHH CS
     RNase_T  85 ..............allvahnaafdvgflraadkrilkkevp..krnqfldtlildkatlkelartsldklaeklgleedgraHrAldDaeatakl 164
                               + +  +    d+    a+ +++ + ++p     +f+d + ++  ++   +r +++ ++++  l + g++H+++dD +++a++
  EPX74171.1 167 lepsraiprsqpknWAWA-CDGPWDMASFIAKQFKFSNTQIPdwIKGHFVDIRAYFSDVY-HVPRVNIEGMLQRWNLRFEGNQHSGIDDSRNIARI 260
                 *****9988888744444.34488888888888888888888986667999999988888.67778***************************987 PP

>> SAP  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.4     1e-07   0.00093       5      31 ..       8      34 ..       7      35 .. 0.95

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 1e-07
                -HHHHHHHHHHTT--TTS-HHHHHHHH CS
         SAP  5 tVaeLKeeLkkrGLptsGkKaeLieRL 31
                tV eL+ +L+++GL +sG K  L  R+
  EPX74171.1  8 TVEELRLALEELGLNSSGSKDKLRRRY 34
                9**********************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (300 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       813  (0.0453455); expected 358.6 (0.02)
Passed bias filter:                      544  (0.0303419); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 2257.63
//
Query:       EPX74172.1  [L=298]
Description: transcription factor TFIIH complex subunit Tfb4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   4.4e-101  338.0   1.4   5.1e-101  337.8   1.4    1.0  1  Tfb4      Transcription factor Tfb4


Domain annotation for each model (and alignments):
>> Tfb4  Transcription factor Tfb4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  337.8   1.4  2.8e-105  5.1e-101       1     276 []      24     284 ..      24     284 .. 0.94

  Alignments for each domain:
  == domain 1  score: 337.8 bits;  conditional E-value: 2.8e-105
        Tfb4   1 pslltvvldtnpkawaeleekltlsevlasllvflNahLalnaaNkvaviashsqkakflYpseekekeaskkkdvelskssknkyrefrlvdelvvee 99 
                 psll+v+ld+np++w++l++++++s+vla++ vflNahLa++++N+vav+ash++k+++lYp++e    ++++     s++++n+yr+fr+vd++v++ 
  EPX74172.1  24 PSLLVVILDANPASWYSLSKRIPVSKVLADINVFLNAHLAFHHDNRVAVLASHYNKVEYLYPKPE----TEETVPLLDSAKEANTYRKFREVDDFVLTG 118
                 79***************************************************************....445555555666779*************** PP

        Tfb4 100 lkellsetskaeekaeksllagalslaLcyinrvsklaeaeaeklksRilvvsaskdsalqyipimNviFaaqklkipidvvklggkdsafLqQasdaT 198
                 +++l+++ts+ ++k   +l++gals+aL+yin+v+++     + ++sRi++ s + d alqyip+mN+iF+aqk++ipi +++++g  + fL+Qa+daT
  EPX74172.1 119 MRRLMHSTSSISKK---TLMSGALSRALAYINQVQNQ-----KYIRSRIVIFSLTGDVALQYIPTMNCIFCAQKKNIPISICNIAG-GTLFLEQAADAT 208
                 ******99987776...69***************444.....458****************************************9.9*********** PP

        Tfb4 199 kGvylkvkepkgllqyLltaflidqssRsllvlptrvsVdfRasCfchrkvvdiGfvCSvCLsilceispenkCktCe 276
                 +G+ylkv++p+gllq L++++++dq++R++l++p++++VdfRa+Cfch++v+diGfvCSvCLsi ce+ +   C+tC+
  EPX74172.1 209 GGIYLKVDNPNGLLQHLMMTLFPDQNLRKHLNTPNQANVDFRATCFCHKNVLDIGFVCSVCLSIYCEPRE--FCSTCQ 284
                 ********************************************************************44..7****6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (298 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       595  (0.0331865); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 2048.21
//
Query:       EPX74173.1  [L=965]
Description: karyopherin Kap109 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     5e-161  536.1   2.2   9.4e-161  535.2   2.2    1.5  1  CAS_CSE1  CAS/CSE protein, C-terminus
   9.2e-150  498.6   6.0   1.6e-149  497.7   6.0    1.4  1  Cse1      Cse1
    4.5e-15   55.3   0.1      2e-14   53.2   0.1    2.3  1  IBN_N     Importin-beta N-terminal domain
     0.0066   16.5   0.0      0.077   13.1   0.0    2.9  2  Xpo1      Exportin 1-like protein
  ------ inclusion threshold ------
       0.05   12.8   0.5       0.65    9.1   0.1    2.5  2  Cnd3      Nuclear condensing complex subunits, C-term domain


Domain annotation for each model (and alignments):
>> CAS_CSE1  CAS/CSE protein, C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  535.2   2.2  2.6e-164  9.4e-161       3     443 .]     518     961 ..     516     961 .. 0.98

  Alignments for each domain:
  == domain 1  score: 535.2 bits;  conditional E-value: 2.6e-164
    CAS_CSE1   3 lLtlrdeqgqpiitkediaPlakdllenlFkllekdesaeklqENeylmkcimRvlivikeavlpvadvvlqkLieilevvskNPsnPrFnyYlFEalg 101
                 lLtlr+++  +i+t+  i+P+++ +l +lF ++e+ ++++kl+EN+ylmk+imRv+i+++e ++p+a+  l++L++i+++v+kNPsnP+Fn+YlFEalg
  EPX74173.1 518 LLTLRHNH-VHIFTSLLIEPIVQPVLVQLFFIIESGATPQKLAENDYLMKAIMRVIIMSQERIVPFAELALSHLTKITTEVCKNPSNPKFNHYLFEALG 615
                 78999988.9***************************************************************************************** PP

    CAS_CSE1 102 alvrlaakadpaavskleeaLfpvfqaiLqedvtEFvPYvfQllaaLleanksetlpesykaliellLsPalWerkgNvpaLvrLlsaiikkasqeiva 200
                 a++r ++k+ p++v++le+aL pvfq++L  dvtEF+PYv+Qll++L+ea+ se lp+ ++++i+++LsPalW++kgN+paLvrLl+a+i++++q +v+
  EPX74173.1 616 AFIRSLSKSGPQTVAQLESALLPVFQNVLVMDVTEFIPYVLQLLSQLIEASGSEPLPDFVVNMIQPCLSPALWDSKGNIPALVRLLQAMITRGPQIFVS 714
                 *************************************************************************************************** PP

    CAS_CSE1 201 enklepvLgiFqkLiaskandeegFdlLesvieslpaevlekylktilsllltrlqnsktekfkkrlvvflslvsakddkglgadaliqlidkvQanvf 299
                 +n +epvLgi++kLi+sk nd++gFdlL++v++ ++a+vl++y+++i+ lll+rl+ns+te+f+ r++vf+++++a ++ ++g+d+li+ +d+vQ++vf
  EPX74173.1 715 NNFVEPVLGIYRKLISSKINDHFGFDLLDRVFSVFDANVLAPYINHIFFLLLSRLKNSRTERFSLRCTVFFFFLAASTTGSCGPDNLIHGVDSVQTGVF 813
                 *************************************************************************************************** PP

    CAS_CSE1 300 tpllekvilpelqklarpldrKlavvsltkllaesealldr..ykklwaklleallkllekpeeeaa..adedeiieeadvedlgfgvaftkLntakkk 394
                 ++++ +++lp++qkl+ pldrK++++++ +ll+    l ++  y++l+  +l++llkl+e+p e+++  aded +++e d++++ f+++f+kL+t + k
  EPX74173.1 814 GQVMSSIVLPQTQKLSLPLDRKITAIGMVHLLTSDLLLSNNspYERLFIPILSSLLKLFELPIEQTQteADEDLMVDEIDADSVMFQASFSKLATSGGK 912
                 ********************************98777776669*******************999886788999************************* PP

    CAS_CSE1 395 eeDplpeikdvkqfvaqslkeaskahngriskivserleaeakqvLaey 443
                 + Dp+ +i+d+kq+ a ++++a+k+ + r+s+i+s +l+ + ++vL++y
  EPX74173.1 913 RLDPFSQITDLKQYAAMEMNAANKRYANRVSQIISMHLPGDGQSVLQSY 961
                 ***********************************************99 PP

>> Cse1  Cse1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  497.7   6.0  4.6e-153  1.6e-149       1     370 []     149     515 ..     149     515 .. 0.99

  Alignments for each domain:
  == domain 1  score: 497.7 bits;  conditional E-value: 4.6e-153
                 HHGGGTTS---CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-HHHHHHHHHHHHHHHHHHHHHHSSS--HHHHHTHHHHHHHHHHHHH--SGGG- CS
        Cse1   1 ifkrwrplfrsdeLfleiklvldkfaepllellkkvdelieakkedkaalkvlfevllllvklfydlnsqdlPeffEdnlkelmealhkylsldnplle 99 
                 ifkrwrplfrsd+Lfleik+vld+f+ep+l+l+k+++ l+ +  +d a+l++lf+v+ll +klfydln+qd+PeffEd+++e+m+++++y+ ++np+le
  EPX74173.1 149 IFKRWRPLFRSDALFLEIKYVLDRFCEPFLALFKQTNALLASGPQDVASLNTLFQVILLQCKLFYDLNCQDIPEFFEDHITEFMTTFLNYFIYSNPALE 247
                 8************************************************************************************************** PP

                 TT-SSS--HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTC--SSGGGHHHHHHHHHHHHHHHTSHHHHTTT-SHHHHHHHHHHTHHHHHS CS
        Cse1 100 tdddeeasvleklkasicelvqlyvekyeeefepyleefveavWnllvsvskqtkyDilvskalkFltsvakvkkyaelFeneevlkeiiekvvlpnvt 198
                    de+ ++l+k+kasice+ +ly+ +yee+f + l++fv+++W+ll+++++++kyD+lv ka++Fltsv++++++ae+F +e +l+++ie v+lpn++
  EPX74173.1 248 ---DEDNNILIKVKASICEIAELYTLRYEEVF-TNLTDFVNMTWTLLTNLTQEEKYDVLVGKAMAFLTSVIRIRRHAEFFRQEPILQQFIELVILPNIC 342
                 ...89999************************.6789************************************************************** PP

                 --HHHHHHHHHSHHHHHHHHSCSS---SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTT-HHHHHHHHHHHHHHHBSS--BTTB-S-B- CS
        Cse1 199 lResDeElFEdepieyirrDlEGsdvdtRrraatdllkeLkekfeakvtevvleyvekllekykenpsanWkkkdlaiyLvtslavkgevtksGvtstn 297
                 lResDeElFEd+p+ey+rrDlEGs++d+R r+a+ l+++L ++f++++t+v+++++++ l++ + np+++W+kk++a++L+ ++a+kg++++ Gvtstn
  EPX74173.1 343 LRESDEELFEDDPLEYVRRDLEGSNSDSRSRSAIVLVRGLLDHFDQLITTVITTHINASLQQSSLNPASDWNKKYAALQLFAAIAIKGQSSRLGVTSTN 441
                 *************************************************************************************************** PP

                 TTS-HHHHHHHHTCHHHH.-SS-S-HHHHHHHHHHHHHHGGGS-HHHHHHHHHHHHHHTTSS-HHHHHHHHHHH CS
        Cse1 298 elvdvvdFfakeiapdLe.advneepilkvdaiKyivtFRsqlskeqlievlpllikfLksesvvvytYaaiai 370
                  +vdvv+Ff+++i pdL+ +  + +p++ +++iK+++tFR+ql+++ql+++lp+++ fLk  ++vvytYa+iai
  EPX74173.1 442 LMVDVVSFFESNIRPDLVqPVGSVHPMVLAEDIKFVFTFRNQLQSQQLVDILPVIAGFLKLPNFVVYTYASIAI 515
                 ******************888899************************************************97 PP

>> IBN_N  Importin-beta N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.2   0.1   5.6e-18     2e-14       1      73 [.      20      94 ..      20      95 .. 0.95

  Alignments for each domain:
  == domain 1  score: 53.2 bits;  conditional E-value: 5.6e-18
                HHHHHHHHHC.STCHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHHHHGGSCCCHC.GSXHHHHHHHHHHHHHHHH CS
       IBN_N  1 AekqLkqlek.qpgflsallqilanseselevRqlAalyLknlitkhWsdeeekq.slpseekeqIrnnllnllg 73
                Ae++Lk +e     f+++ll+i+a+ +s+++++++A+ly+kn+i+++W  ee++   + +e+ e+++ +++ l++
  EPX74173.1 20 AEEALKSWEVqDASFALQLLSIVADATSDPSIKLAASLYFKNYIKRYWDAEEDATvRINDEVAELVKREIISLML 94
                8*********999************************************7777779***************9997 PP

>> Xpo1  Exportin 1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.0   2.1e-05     0.077       2      38 ..      98     134 ..      97     148 .. 0.84
   2 ?   -1.6   0.0      0.71   2.5e+03      83      93 ..     655     665 ..     628     702 .. 0.60

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 2.1e-05
                 HHHHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHHCT. CS
        Xpo1   2 kflrnklaealaelflqeypnnWpsffddllsllsss 38 
                 ++++ +l e++ +++  ++p++W s+++dl+s+ls+ 
  EPX74173.1  98 ANIQVQLGEVVGYIANFDFPDRWDSLLPDLISRLSPV 134
                 68999****************************9983 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.71
                 HHHHHHHHHHH CS
        Xpo1  83 ilelllqileq 93 
                 +l+ll+q++e+
  EPX74173.1 655 VLQLLSQLIEA 665
                 33333333333 PP

>> Cnd3  Nuclear condensing complex subunits, C-term domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0     0.068   2.4e+02      64     101 ..     419     457 ..     410     536 .. 0.72
   2 ?    9.1   0.1   0.00018      0.65     169     212 ..     601     645 ..     564     669 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.068
                 HHHHHHHHHHHS.-HHHHHHHHHHHHHHHHHH-CGGGGG CS
        Cnd3  64 nlklflqalskg.neelkiialkaifDllllhglevldk 101
                 +l+lf  ++ kg  ++l +++ + ++D+++ +  ++  +
  EPX74173.1 419 ALQLFAAIAIKGqSSRLGVTSTNLMVDVVSFFESNIRPD 457
                 5899999999999999**************999877644 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00018
                 GGGTT.-HHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHH CS
        Cnd3 169 petee.nqrLrQcLsvffpvYafsspknqellaeiflptlrtlln 212
                 p++ + n++L  +L+ f+  ++ s p+   +l++++lp+++ +l 
  EPX74173.1 601 PSNPKfNHYLFEALGAFIRSLSKSGPQTVAQLESALLPVFQNVLV 645
                 44333699*********************************9653 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (965 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       492  (0.0274416); expected 358.6 (0.02)
Passed bias filter:                      369  (0.0205812); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.75u 0.28s 00:00:01.03 Elapsed: 00:00:00.48
# Mc/sec: 6082.96
//
Query:       EPX74174.1  [L=665]
Description: tRNA uridine 5- carboxymethylaminomethyl modification enzyme [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   1.7e-143  478.5   0.0     2e-143  478.2   0.0    1.1  1  GIDA           Glucose inhibited division protein A
    2.9e-56  191.0   0.0    4.3e-56  190.4   0.0    1.3  1  GIDA_assoc     GidA associated domain
    6.2e-07   28.9   0.2    1.2e-06   28.0   0.2    1.4  1  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
    4.9e-05   22.9   0.5      7e-05   22.4   0.5    1.2  1  FAD_oxidored   FAD dependent oxidoreductase
    0.00055   19.3   0.2      0.001   18.4   0.2    1.3  1  AlaDh_PNT_C    Alanine dehydrogenase/PNT, C-terminal domain
     0.0013   19.2   0.1     0.0033   18.0   0.1    1.7  1  Pyr_redox      Pyridine nucleotide-disulphide oxidoreductase
     0.0091   15.1   1.5     0.0091   15.1   1.5    1.7  2  FAD_binding_2  FAD binding domain
  ------ inclusion threshold ------
      0.023   13.8   0.1      0.088   11.9   0.1    1.8  1  K_oxygenase    L-lysine 6-monooxygenase (NADPH-requiring)
      0.034   13.4   0.1       0.11   11.7   0.0    1.8  2  Pyr_redox_3    Pyridine nucleotide-disulphide oxidoreductase
      0.046   12.8   0.8       0.19   10.8   0.8    1.9  1  Lycopene_cycl  Lycopene cyclase protein
        0.3   10.3   0.7       0.49    9.6   0.7    1.3  1  FAD_binding_3  FAD binding domain
       0.31   11.0   1.7        0.4   10.6   0.0    2.0  2  NAD_binding_9  FAD-NAD(P)-binding
       0.45    9.2   2.8       0.67    8.6   0.6    2.2  3  HI0933_like    HI0933-like protein
       0.62    9.6   2.6        2.9    7.4   1.4    2.1  2  DAO            FAD dependent oxidoreductase


Domain annotation for each model (and alignments):
>> GIDA  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  478.2   0.0  1.6e-146    2e-143       2     391 ..      26     424 ..      25     425 .. 0.97

  Alignments for each domain:
  == domain 1  score: 478.2 bits;  conditional E-value: 1.6e-146
                 EEEE-SSHHHHHHHHHHHHTT--EEEEES-GGGTT--SSSSEEE-TTHHHHHHHHHHHT-SHHHHHHHHEEEEEEESTTS-CCC-EEEEEE-HHHHHHH CS
        GIDA   2 viViGgGhAGceAAlaaarlGakvlLithkldtiaelsCnpsiggiakgllvrEidalggliikaadkagiqfrilNrskGpavralraqvdrelyske 100
                 v+ViGgGhAG+eAA+a+arlG++++L+t + ++i+++sCnp++ggi+kg+l+rEid lgg++  ++d ++iqf++lNrskG av+++raq+dr+ ++++
  EPX74174.1  26 VVVIGGGHAGVEAAAASARLGVPTILLTRSRNDIGQMSCNPAFGGIGKGTLMREIDSLGGVVSGVCDDSAIQFHVLNRSKGAAVWSPRAQMDRSIFKAN 124
                 9************************************************************************************************** PP

                 HHHHHHT.STTEEEEES-EEEEEECT.....TEEEEEEETTS-EEEECEEEE--TT-BT-EEEETTEEEESSCTTC--B-THHHHHHHTT--EEEEEEE CS
        GIDA 101 vteklen.epnleiieeeveelivee.....kkvkgvvtedgetikakavviatGtflkgkihigekelsaGrlgeltseglseslkelgfellrlktg 193
                 ++++++n  pnl+i+e+++ ++ ++       +++ v+++dg++i+a+ vvi+tGtfl ++i +g+k+++aGrlge +s  ls+ l++lgf+++rlktg
  EPX74174.1 125 MQKRMSNyRPNLQILEGSAVDITTTPdasgnLTCSSVKLADGTEIEANGVVITTGTFLGANINVGNKQTPAGRLGEAPSFPLSDCLRRLGFQMGRLKTG 223
                 *****9978*************88779998778999*************************************************************** PP

                 E--EEEGGGS-TTTSEEE---SS-B-SSSSSSST....CG----EEEEE--HHHHHHHHCTCCC-T.T----B--S-CCC-SSTCCCCCCSTT-S--EE CS
        GIDA 194 tppridkesidfskleeqsgdkegeefsylnkpl....nkeqvecfltatneathkiikenlkksaklfegcieelgprycpsiedkivrladkeshqv 288
                 tppri+ +++d+ +l eq gd+ +e+fs+ n +     + +q +c+ t+t+e+th+ i++nl  ++++   +i+  +prycps+e k++r+++k++h+v
  EPX74174.1 224 TPPRIHPKTVDVANLSEQVGDEVPEAFSFRNLNDnffpKLPQRSCYKTYTTEQTHAHIRDNLYLAPHMLAHDIH--SPRYCPSLEAKVTRFPEKSRHIV 320
                 *********************9999999977665337669**************************9*999987..9********************** PP

                 EEEESSTT--E.EEEET----S-HHHHHHHHTTSTT-TT--EEE--EEEEEEEE-GGGB-TTSBBSSSBTEEE-CGGGTB-SHHHHHHHHHHHHHHHHH CS
        GIDA 289 fLepegletel.iylvgfstslpeevqkevlrsipGLenaeivrpGyaieydyvdprqllntLetkkvkgLflAGqinGteGYeEaaaqGllAGinaar 386
                 +Lepegl+ +  +y++g+s+s+pe+vqk ++r++pGLenae+vrp+y + ydyvdprql +tLetkk+++Lf+AGqinGt+GYeEaaaqG++AGina +
  EPX74174.1 321 WLEPEGLSPDSfWYPNGLSNSMPEDVQKLIIRTVPGLENAELVRPAYGVMYDYVDPRQLHPTLETKKIHKLFTAGQINGTTGYEEAAAQGIIAGINAGL 419
                 ********9888*************************************************************************************99 PP

                 HHCTS CS
        GIDA 387 kakgk 391
                  a gk
  EPX74174.1 420 IALGK 424
                 88775 PP

>> GIDA_assoc  GidA associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  190.4   0.0   3.4e-59   4.3e-56       2     209 ..     428     639 ..     427     640 .. 0.95

  Alignments for each domain:
  == domain 1  score: 190.4 bits;  conditional E-value: 3.4e-59
                 ---TTT-HHHHHHHHHHHH--SS-B-CCCB--TTTCCC-CCCHHHHHHHHHHHTTSS-H.HHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHH...HHH CS
  GIDA_assoc   2 ilkRseaYiGVLiDDLvtkgvkEPYRmfTSRaEyRlllRaDnAdlRLtekgrelGlvse.eryekfeekkeeieelkellkstklkseewkkl..lekk 97 
                 ++ R+ a +GV+iDDLvtkgvkEPYR+fTSR+EyRl++RaDnAdlRL+++ ++l l+++ +++++f+++k+ i++++  lk+ +l+s++w+kl  ++  
  EPX74174.1 428 TIPRNVALLGVMIDDLVTKGVKEPYRVFTSRSEYRLTTRADNADLRLVPLTKSLNLLDDsSQWDTFSSTKSLIDTVIFDLKNKNLSSQQWAKLgfSVPY 526
                 688*****************************************************965279******************************9999999 PP

                 T....EHHHHCTTST--HHHHHCCHHHHHHHSCHHHHHHHHHHHCHHHHHHHHHHCHH.HHHHHTSB--TTS-CCCSTT--CHHHHHHHHH--SCHHHH CS
  GIDA_assoc  98 eskklslaellkrpevkledlleelpeeeeeseeeleqveieakYegyiekqeeeiek.lkkeenlkipedldYskikgLskearekLkkvrPetlgqA 195
                 ++k +s+++ll+ ++++  d+l +lp+ +e  ++ le+v ie +Y+ yi +q+++ +  + ++e++ ip ++d++k++++s+e+   Lk++rP t+gq 
  EPX74174.1 527 DGKYRSAWQLLTFTNLNAMDILFTLPSVKELPRRILERVIIEGRYAFYIGRQASQNKLlYYRDESTVIPLNFDFEKLQSVSAEELALLKTIRPVTIGQL 625
                 999******************99999999999999********************99846799************************************ PP

                 TTSTTS-HHHHHHH CS
  GIDA_assoc 196 srisGvtpaaisvL 209
                 +ri+G++p+++ ++
  EPX74174.1 626 KRIPGIKPSTVIYM 639
                 *********99765 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   0.2   9.1e-10   1.2e-06       2     109 ..      25     180 ..      24     198 .. 0.86

  Alignments for each domain:
  == domain 1  score: 28.0 bits;  conditional E-value: 9.1e-10
                  SEEEE--SHHHHHHHHHHHHHTS-EEEEETTHCHHHCSHHHHCHHHHHHHHHHHHH.......................................... CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......................................... RF
  Pyr_redox_2   2 dvvviGgGpAGlaaaltlaqagakvtlvelegtclnggcllskallgvaedaeias.......................................... 57 
                  +vvviGgG+AG++aa   a+ g+ ++l+  +     g+++  +a+ g+++ +  ++                                          
   EPX74174.1  25 HVVVIGGGHAGVEAAAASARLGVPTILL-TRSRNDIGQMSCNPAFGGIGKGTLMREidslggvvsgvcddsaiqfhvlnrskgaavwspraqmdrsif 121
                  79**************************.66666667777777777777766544466688888899999999999999******************* PP

                  .....HHHHCHHHHCCCCHCCTCEEEE..ESC.EEEEETEEECTCEEEEEESEEEE---E CS
                  .....xxxxxxxxxxxxxxxxxxxxxx..xxx.xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2  58 .....evvkklnqgielllgeevvkid..pgk.kkvklekkkegdeekiaydklvlAtGs 109
                       + +++++ +++ l g ++v+i   p++ ++++++  k  d+++i+++ +v+ tG 
   EPX74174.1 122 kanmqKRMSNYRPNLQILEG-SAVDITttPDAsGNLTCSSVKLADGTEIEANGVVITTGT 180
                  ****9999999*****9999.7777776666679999999999****************4 PP

>> FAD_oxidored  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.5   5.4e-08     7e-05       2      36 ..      26      60 ..      25     186 .. 0.59

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 5.4e-08
  FAD_oxidored  2 vvVvGGgpaGvaAAiaAaraGakvlLveergvlGG 36
                  vvV+GGg aGv AA a+ar G  ++L+ +++   G
    EPX74174.1 26 VVVIGGGHAGVEAAAASARLGVPTILLTRSRNDIG 60
                  9*********************9999887654333 PP

>> AlaDh_PNT_C  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.2   7.9e-07     0.001      26      58 ..      21      53 ..       4      70 .. 0.83

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 7.9e-07
                 B---EEEEESTSHHHHHHHHHHHHTT-EEEEEE CS
  AlaDh_PNT_C 26 vepakvlviGgGvaGlqAiatakglgakVtvlD 58
                 +++++v+viGgG aG++A+a++++lg  + +l 
   EPX74174.1 21 TNKGHVVVIGGGHAGVEAAAASARLGVPTILLT 53
                 4789**********************8776665 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.1   2.6e-06    0.0033       1      32 [.      25      56 ..      25      67 .. 0.90

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 2.6e-06
                EEEEECSSHHHHHHHHHHHHTTSEEEEEESSS CS
   Pyr_redox  1 kvvvvGgGyiglElAgalaelgkkVtvversd 32
                +vvv+GgG  g+E+A+a a+lg  + ++ rs 
  EPX74174.1 25 HVVVIGGGHAGVEAAAASARLGVPTILLTRSR 56
                89********************9999998876 PP

>> FAD_binding_2  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   1.5   7.1e-06    0.0091       2      33 ..      26      57 ..      25      72 .. 0.85
   2 ?   -2.3   0.0       1.4   1.8e+03     188     204 ..     167     183 ..     139     204 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 7.1e-06
                   EEEE--SHHHHHHHHHHHHTTT-EEEEESSSG CS
  FAD_binding_2  2 viViGsGlAGLaAAleaaeaGlkvavvekeqe 33
                   v+ViG+G AG  AA++ a+ G  +++++   +
     EPX74174.1 26 VVVIGGGHAGVEAAAASARLGVPTILLTRSRN 57
                   9*************************998766 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 1.4
                    EEEEESEEEE-----GG CS
  FAD_binding_2 188 vrirakavvlatgGfgr 204
                    ++i+a++vv++tg f +
     EPX74174.1 167 TEIEANGVVITTGTFLG 183
                    46789999999999976 PP

>> K_oxygenase  L-lysine 6-monooxygenase (NADPH-requiring)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   6.9e-05     0.088     174     339 ..       6     179 ..       2     181 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 6.9e-05
  K_oxygenase 174 rvvHsseylerkeellakkriaVvGsGqSaaeifedllrr.qkk.......velklvtrsealeplddspfvneifsPeyvdyfyslpeekreallke 263
                  ++vH+s+ + +++   +k +++V+G+G  + e +   +r   ++        ++  ++ ++a+  + +  ++ ei s   v + +  ++  + ++l++
   EPX74174.1   6 TFVHTSRRAFSTNLVTNKGHVVVIGGGHAGVEAAAASARLgVPTilltrsrNDIGQMSCNPAFGGIGKGTLMREIDSLGGVVSGVCDDSAIQFHVLNR 103
                  789****9999999******************998777664332333333478888888888888888888888877655555555555555566666 PP

  K_oxygenase 264 qkatnykgvdaelieelyeelyeqkvkg.eerlrllpnrevesaeaegkgeveltlrneesgeeetlevdavvlATG 339
                  +k  +  + +a++ ++++++  ++++++ +++l++l+ ++v+ ++ +++ + +lt++  +  + +++e++ vv+ TG
   EPX74174.1 104 SKGAAVWSPRAQMDRSIFKANMQKRMSNyRPNLQILEGSAVD-ITTTPDASGNLTCSSVKLADGTEIEANGVVITTG 179
                  677888888999999999999999998835579999999986.5555567899999999999999999999999998 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   8.8e-05      0.11     162     197 ..      21      56 ..       6      67 .. 0.83
   2 ?   -1.9   0.0       1.2   1.5e+03     120     136 ..     166     182 ..     153     189 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 8.8e-05
  Pyr_redox_3 162 yagqkvvViGgknSavDaAlelvrkgaeVtvvtrgs 197
                  +++ +vvViGg+  +v+aA   +r g    ++tr+ 
   EPX74174.1  21 TNKGHVVVIGGGHAGVEAAAASARLGVPTILLTRSR 56 
                  56889*********************9999998864 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.2
  Pyr_redox_3 120 ketyeAkkviiAtGefd 136
                    ++eA+ v+i tG f 
   EPX74174.1 166 GTEIEANGVVITTGTFL 182
                  45899999999999995 PP

>> Lycopene_cycl  Lycopene cyclase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.8   0.00015      0.19       2     144 ..      26     183 ..      25     198 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00015
  Lycopene_cycl   2 vvviGaGpAglslAarlteakpglkvvlieaspsllfpnnyvWsdefedlga.........leecvehsWsgtivylddgkkillg...raYgrvs 85 
                    vvviG+G Ag+  Aa +  a+ g+  +l+  s +    ++ +    f ++g+         l  +v+ +  +  +++   ++ +      + +++ 
     EPX74174.1  26 VVVIGGGHAGVEAAAAS--ARLGVPTILLTRSRND--IGQMSCNPAFGGIGKgtlmreidsLGGVVSGVCDDSAIQFHVLNRSKGAavwSPRAQMD 117
                    8***************9..9999999999776655..355555555555555556666666999999999998888876655555545578899** PP

  Lycopene_cycl  86 skrlkeellerlv..engvklleakvesveeeea..ge...slvvleggrkirarlvvdarglasl 144
                    ++ +k+++++r+     + + le+ +  ++  ++  g+   s+v l++g +i+a  vv  +g + +
     EPX74174.1 118 RSIFKANMQKRMSnyRPNLQILEGSAVDITTTPDasGNltcSSVKLADGTEIEANGVVITTGTFLG 183
                    ***********985556788999999999988873322333677889999*******999997655 PP

>> FAD_binding_3  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.7   0.00038      0.49       3      37 ..      25      59 ..      23      64 .. 0.92

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00038
                   EEEEE--SHHHHHHHHHHHHTTHHEEEEESSSSSC CS
  FAD_binding_3  3 dVlIVGaGpaGlmlallLseaGvrvvlvekrsttv 37
                    V+++G+G aG+ +a   ++ Gv ++l+++ ++++
     EPX74174.1 25 HVVVIGGGHAGVEAAAASARLGVPTILLTRSRNDI 59
                   69****************************98775 PP

>> NAD_binding_9  FAD-NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   1.4       5.3   6.8e+03       1      14 [.      27      40 ..      27      46 .. 0.84
   2 ?   10.6   0.0   0.00031       0.4      89     155 ..     114     180 ..      95     181 .. 0.74

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 5.3
  NAD_binding_9  1 aivGaGprGlavle 14
                   +++G+G +G+ +++
     EPX74174.1 27 VVIGGGHAGVEAAA 40
                   69*******98876 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00031
  NAD_binding_9  89 dfvpRalyGrYlrdlfeellarlpegvtvevhraevvdleeradg......qavlladgaslaadaVvLAlGh 155
                    + + R+++ + +++++++         +++++++++vd+++++d         v ladg++++a+ Vv+++G 
     EPX74174.1 114 AQMDRSIFKANMQKRMSNYR------PNLQILEGSAVDITTTPDAsgnltcSSVKLADGTEIEANGVVITTGT 180
                    55555555555555555544......257899*********997755554347899****************7 PP

>> HI0933_like  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.6   0.00052      0.67       2      31 ..      25      54 ..      24      61 .. 0.86
   2 ?   -3.0   0.0       1.7   2.2e+03     144     163 ..     160     179 ..     150     181 .. 0.86
   3 ?   -1.0   0.0      0.42   5.4e+02     368     391 ..     381     401 ..     366     414 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00052
                 SEEEE--SHHHHHHHHHHHHTT--EEEE-S CS
  HI0933_like  2 dviviGgGaAGlmaAisaakrgkrVlllek 31
                 +v+viGgG AG+ aA++ a+ g  ++ll +
   EPX74174.1 25 HVVVIGGGHAGVEAAAASARLGVPTILLTR 54
                 69***************9999998888765 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.7
                  EEEE.TTEEEEESEEEE--- CS
  HI0933_like 144 rvktkseeeleadklvlAtG 163
                  +vk+ +++e+ea+ +v++tG
   EPX74174.1 160 SVKLADGTEIEANGVVITTG 179
                  57788999**********99 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 0.42
                  TT-BBTTSTTEEE-GGGBSEEE-T CS
  HI0933_like 368 ktmeskkvpgLffaGEvlDvegvt 391
                   t+e+kk+ +Lf aG +   +g t
   EPX74174.1 381 PTLETKKIHKLFTAGQI---NGTT 401
                  3899***********75...4444 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   1.4    0.0022       2.9       1      33 [.      25      60 ..      25      76 .. 0.81
   2 ?    0.9   0.0      0.21   2.7e+02     133     205 ..     107     183 ..      92     202 .. 0.68

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0022
                EEEEECTSHHHHHHHHHHHHTT...EEEEESSSSTT CS
         DAO  1 dvviiGGGiiGlstAyeLarrg...Vtllekgdiag 33
                +vv+iGGG +G+ +A + ar g   ++l  +++++g
  EPX74174.1 25 HVVVIGGGHAGVEAAAASARLGvptILLTRSRNDIG 60
                79****************999999666655556666 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.21
                 EEEEETTEEEEEHHHHHHHHHHHHHHT..T-EEEESECEEEEEE.EE..TCEEEEE....EECTEEEEEEEEEEE--GGGHH CS
         DAO 133 galfypdtgqvdpakltaalaraaeal..Gveilegtevtglee.ed..gkvwgve....rttpgendaadavVnaaGawsd 205
                 +a+++p  +q+d   + a +++++ +     +ileg  ++++   +d  g   ++     + ++g++ +a+ vV+++G + +
  EPX74174.1 107 AAVWSPR-AQMDRSIFKANMQKRMSNYrpNLQILEG-SAVDITTtPDasG---NLTcssvKLADGTEIEANGVVITTGTFLG 183
                 5588999.9999999999999999887556999999.5556634244432...2224454333366533466******8854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (665 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       486  (0.0271069); expected 358.6 (0.02)
Passed bias filter:                      470  (0.0262145); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.66u 0.28s 00:00:00.94 Elapsed: 00:00:00.43
# Mc/sec: 4669.46
//
Query:       EPX74175.1  [L=884]
Description: SWI/SNF complex subunit Sol1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.7e-18   65.6   0.0    1.1e-17   64.4   0.0    1.6  1  ARID      ARID/BRIGHT DNA binding domain


Domain annotation for each model (and alignments):
>> ARID  ARID/BRIGHT DNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.4   0.0   6.3e-22   1.1e-17       4      90 .]     208     289 ..     206     289 .. 0.94

  Alignments for each domain:
  == domain 1  score: 64.4 bits;  conditional E-value: 6.3e-22
                 HHHHHHHHHHHHTTS.SSS----SSSS-STTHHHHHHTTTSSHHHHTT.CHHHHHHHHHTS-..-.......HHHHHHHHHHHHHHHH CS
        ARID   4 eFlstLkqfhenrgt.lkkiPviggkevdlykLyraVikrGGfrkvtqknkWeevaqklglpredpeasesvaqalksiYeryLlpyE 90 
                 +F+ +L +f+++rgt +k +P i+g +++l+ Ly++V++ GG+r+vt+ ++W++va  lg+++       ++ + l + Y+++LlpyE
  EPX74175.1 208 KFMVSLLSFMAKRGTpMKDYPSIDGYPINLMMLYALVMRTGGSRRVTDLKLWPKVAASLGFTN------PKAVSLLYQNYNECLLPYE 289
                 7**************6699*****************************9************63......367889************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (884 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       609  (0.0339673); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.24s 00:00:00.91 Elapsed: 00:00:00.42
# Mc/sec: 6287.88
//
Query:       EPX74176.1  [L=412]
Description: adhesion defective protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.3e-57  192.7   0.1    1.2e-56  192.0   0.1    1.3  1  LIM_bind  LIM-domain binding protein


Domain annotation for each model (and alignments):
>> LIM_bind  LIM-domain binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  192.0   0.1   6.5e-61   1.2e-56       1     241 []      25     266 ..      25     266 .. 0.87

  Alignments for each domain:
  == domain 1  score: 192.0 bits;  conditional E-value: 6.5e-61
    LIM_bind   1 lrllelierlsnrs..nedsdieyWrkfvaefFspdavlrltlkldeqek.epkqFeittpllPryfrtlfesgvkslqlildgareqvlsngsivlec 96 
                 lrll+++e+ls       ++di yWr+fv++fF++++++r+++  + q + e+ qFe+++++lPr+f+ ++ ++++++++++  ++e++++n+++++e+
  EPX74176.1  25 LRLLQYNEQLSCGWenTMKEDIGYWRRFVHNFFTEKGTFRFNFEPNAQRTrESMQFELSYAALPRFFYLNYMGDMRRMSIVMGDTKEFAIPNNGYFVES 123
                 79**********99888899************************966655599********************************************** PP

    LIM_bind  97 dkatfvytyedgsrvvlegqlrvlf..dadlkIewlefavrsheeliprsalekklkqllesassaspkvskkvskrqg.ifgklsskepaeepp..ea 190
                 ++a++vy++ +g++v + g+lr++f   + lk+++lef++++++e++ r+ + ++  +     ++ + ++   + +++g + +++++ +p  +p     
  EPX74176.1 124 SHASLVYQFANGIQVIVYGCLRAHFhrAPLLKLDSLEFSATNYSEYLLRELVNSASLA-----QQYQHEHRPGQENTSGfPSQGSEQAPP-YPPYnlGN 216
                 *************************64459*******************888887322.....333334455555566645555444333.33336877 PP

    LIM_bind 191 vkqlpsspvnsfGitesvmrfLeiaevmssmkdLmsfskknnilsPleaLk 241
                   ql s+pvn++Gi++++mrfLei+e++s m+dL+ f+  ++  +P +aL+
  EPX74176.1 217 SAQLASTPVNEYGIEPRIMRFLEISETISGMRDLIAFT-LAQRSGPASALQ 266
                 89***********************************8.999*******96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (412 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       679  (0.0378716); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.23s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 3022.25
//
Query:       EPX74177.1  [L=639]
Description: R3H and G-patch domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.1e-11   42.4   0.0    1.4e-10   41.0   0.0    1.8  1  R3H       R3H domain
      1e-07   31.8   0.4    1.9e-07   30.9   0.4    1.5  1  G-patch   G-patch domain
  ------ inclusion threshold ------
        2.6    8.8   9.4      0.087   13.5   0.8    3.0  3  Fmp27_SW  RNA pol II promoter Fmp27 protein domain


Domain annotation for each model (and alignments):
>> R3H  R3H domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.0   0.0   2.4e-14   1.4e-10       9      60 .]     475     526 ..     467     526 .. 0.83

  Alignments for each domain:
  == domain 1  score: 41.0 bits;  conditional E-value: 2.4e-14
                 HHHHHHH-S--EEE-----SHHHHHHHHHHHHSSEEEEEE--SS-SEEEEEE CS
         R3H   9 klaefvkdtgrslefppmssyeRriiHelaeaygleseSvGeepkRrvvvtk 60 
                 +++++  +   ++++p +++y Rr++Hela++ +l s+S+G++ kR++v++k
  EPX74177.1 475 RMQQLSLSGVDEVSLPACPKYVRRLVHELANRLNLRSQSYGSGKKRYTVLSK 526
                 444444444469*************************************987 PP

>> G-patch  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.9   0.4   3.1e-11   1.9e-07       3      43 ..     598     639 .]     596     639 .] 0.97

  Alignments for each domain:
  == domain 1  score: 30.9 bits;  conditional E-value: 3.1e-11
     G-patch   3 niGvkmLqkmGWkpGqGLG.kkeqGiaePieakikkdraGlG 43 
                 n G +mL++ GW  G+GLG  +++G  e+++a +k+ r+GlG
  EPX74177.1 598 NPGRRMLERLGWYAGKGLGhPENEGSHESLRAIVKTSRSGLG 639
                 779**************************************9 PP

>> Fmp27_SW  RNA pol II promoter Fmp27 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.2       1.3   7.5e+03      20      44 ..      71      95 ..      65     108 .. 0.56
   2 ?   -1.9   0.1      0.97   5.8e+03      21      51 ..     177     206 ..     168     227 .. 0.58
   3 ?   13.5   0.8   1.5e-05     0.087       5      76 ..     404     484 ..     400     503 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1.3
    Fmp27_SW 20 akekqkeeikeirerlygkeelske 44
                ++e++++++  ++++l++++e+s+ 
  EPX74177.1 71 IQEEKSKQEATRSRELVNNNEVSEI 95
                3344444445555555555555443 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.97
    Fmp27_SW  21 kekqkeeikeirerlygkeelskedkdknek 51 
                 +++ k+e+++ +e+ +g+e+ +   +d +e+
  EPX74177.1 177 ISETKREAQKTSEKHFGREK-PYVLSDTDEN 206
                 45556666666666666665.3444444444 PP

  == domain 3  score: 13.5 bits;  conditional E-value: 1.5e-05
    Fmp27_SW   5 LqehnsksWirrikaakekqkeeikeirerlygkeelskedkdknek.........ilplpkrppLlrltiedldleldkp 76 
                 +++h  ++Wi+ ++++ +k++e+++++ + l+gk++ +k  k+              l+  +++ +++++ +  +l l+  
  EPX74177.1 404 MYSHLQEQWIKDHQKKAKKRNEREEKRAQGLLGKKSSKKLAKKAAASekgsdpdspTLSKADHAFIMDAYKRMQQLSLSGV 484
                 678999*******9999******************9666555555447788888888888888888888888888887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (639 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2003  (0.111718); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.75u 0.32s 00:00:01.07 Elapsed: 00:00:00.50
# Mc/sec: 3878.21
//
Query:       EPX74178.1  [L=309]
Description: transmembrane receptor Wsc1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.6e-08   33.5   7.6    3.6e-08   33.5   7.6    2.7  2  WSC              WSC domain
    0.00011   21.6   1.9    0.00011   21.6   1.9    2.4  1  SKG6             Transmembrane alpha-helix domain
    0.00062   19.8  10.1    0.00071   19.6  10.1    1.2  1  SPX              SPX domain
     0.0012   18.7   0.0     0.0012   18.7   0.0    2.3  1  TMEM154          TMEM154 protein family
      0.004   16.9   6.4      0.088   12.4   6.4    2.2  2  SARAF            SOCE-associated regulatory factor of calcium
  ------ inclusion threshold ------
      0.014   15.3   0.4      0.014   15.3   0.4    2.0  2  Mid2             Mid2 like cell wall stress sensor
      0.016   15.8   1.2      0.016   15.8   1.2    2.4  1  DUF4690          Small Novel Rich in Cartilage
       0.04   13.1  21.8      0.053   12.7  21.8    1.1  1  SOG2             RAM signalling pathway protein
      0.058   13.8   5.9      0.093   13.1   5.9    1.3  1  DUF1180          Protein of unknown function (DUF1180)
      0.064   13.5   1.0      0.088   13.0   0.1    1.7  2  DUF347           Repeat of Unknown Function (DUF347)
      0.065   13.0   6.1       0.12   12.2   6.1    1.4  1  Adeno_E3_CR2     Adenovirus E3 region protein CR2
      0.067   11.3   3.3       0.08   11.1   3.3    1.1  1  Hid1             High-temperature-induced dauer-formation pro
       0.08   12.7   1.0       0.25   11.1   0.8    2.0  2  Pox_G9-A16       Pox virus entry-fusion-complex G9/A16
       0.11   11.7   9.9       0.19   11.0   9.9    1.3  1  ORC6             Origin recognition complex subunit 6 (ORC6)
        0.2   11.6  23.0       0.38   10.7  23.0    1.4  1  DUF4614          Domain of unknown function (DUF4614)
        0.2   12.1   0.6       0.45   11.0   0.6    1.5  1  TraL             TraL protein
       0.42   10.7  10.6          1    9.4  10.6    1.5  1  Podoplanin       Podoplanin
       0.56    8.7  14.0       0.82    8.2  14.0    1.3  1  Macoilin         Macoilin family
        1.9    7.3  35.0        2.5    7.0  35.0    1.1  1  DUF5585          Family of unknown function (DUF5585)
        8.1    5.8  12.2         14    5.0  12.2    1.4  1  Plasmodium_Vir   Plasmodium vivax Vir protein
        9.8    5.0  21.7         13    4.7  21.7    1.3  1  CytochromB561_N  Cytochrome B561, N terminal


Domain annotation for each model (and alignments):
>> WSC  WSC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.5   7.6   4.3e-11   3.6e-08       3      82 .]      36     109 ..      34     109 .. 0.83
   2 ?   -2.8   3.8       8.6   7.3e+03      13      30 ..     134     151 ..     121     192 .. 0.65

  Alignments for each domain:
  == domain 1  score: 33.5 bits;  conditional E-value: 4.3e-11
         WSC   3 GCytdssesrrllgpssasdstmtpekC.aafCkak.gykyagledgseCyCgnslpaaavkassssCnasCsGdssqtCGg 82 
                 GCy+       ++ + + s++ +tp+ C  + C+++ ++++++++ g++CyCgn+l a++v++  ssCn +C+G  +  CGg
  EPX74178.1  36 GCYQV-----DDSLSVKGSYQYLTPQYCyDHLCNDDpNVAFVAIR-GKNCYCGNTLTAKTVDS--SSCNEPCPGFGNLKCGG 109
                 78773.....46778889999*******4457*988678888888.66**********98888..45**************8 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 8.6
         WSC  13 rllgpssasdstmtpekC 30 
                 +++++ss+++s+ tp++ 
  EPX74178.1 134 TSSTQSSSTQSSSTPSST 151
                 333333444444444333 PP

>> SKG6  Transmembrane alpha-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   1.9   1.3e-07   0.00011       2      37 ..     219     256 ..     218     257 .. 0.86

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 1.3e-07
        SKG6   2 sdssnsntvaIavaVaVPVa..ViiivLlailifvrRR 37 
                 s+s+ns ++   v+++++ +  +++i+L++ l+f++R+
  EPX74178.1 219 SKSNNSLNAGAIVGIVIGCVafAVVIALCVCLYFWYRK 256
                 8888998888889*****873469*************8 PP

>> SPX  SPX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6  10.1   8.3e-07   0.00071      64     155 ..     125     219 ..      85     300 .. 0.65

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 8.3e-07
         SPX  64 tepstsaaadesgnsaadasssepkdeaeslprrsplsrssrssssygglvssppsansssssddssesnpa...dssssssssesessssssps 155
                 t++s+s++a++s++s++++sss+p+++ +s+++++p+s+s+++sss ++ +ss++s++ss+   +  +s  +   +s++sssss+++s++ +++s
  EPX74178.1 125 TSSSQSSSATSSTQSSSTQSSSTPSSTTSSTSSSRPSSSSHPPSSSHSSYNSSSSSSSSSHTPTTFASSYVRtvtPSPTSSSSSAAGSPNGNQSS 219
                 34444444444444444444444444444444444444444444444444444444433333333333332244433333333333332222222 PP

>> TMEM154  TMEM154 protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   1.5e-06    0.0012       7     103 ..     175     278 ..     168     280 .. 0.53

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 1.5e-06
     TMEM154   7 sgdtaletatleeesadatsa.asteseslkqeeakeslssaelsnesdqlel...vlmiiiPlvllillllvviiliqkkkrkrsK....ddekseae 97 
                 +++++ ++   ++++  ++ + ++t s++  ++ + +  ++++ s +s++  +   ++ i+i  v++++++ + + l   +++ ++K    dd + +++
  EPX74178.1 175 NSSSSSSSSSHTPTTFASSYVrTVTPSPTS-SSSSAAGSPNGNQSSKSNNSLNagaIVGIVIGCVAFAVVIALCVCLYFWYRKFKAKmnakDDITFPSY 272
                 444444444444444433333044433333.45555555566666665554444779999999999987765555555577776665111155555566 PP

     TMEM154  98 sdelds 103
                 ++elds
  EPX74178.1 273 KSELDS 278
                 667775 PP

>> SARAF  SOCE-associated regulatory factor of calcium homoeostasis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   6.4    0.0001     0.088     250     328 ..     112     193 ..      59     196 .. 0.66
   2 ?    2.3   0.0      0.13   1.1e+02     150     183 ..     221     260 ..     197     295 .. 0.51

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.0001
       SARAF 250 FWtGlatGaaaGYlagrrraqneeteeeekeksssWgsss...egsssssssssssssassssssssssssstrestGFGgT 328
                 +W+   tG       ++++++ ++++++++++sss  ss+   ++ss+ ssss+  ss++ss +ssssssss ++ t+F+++
  EPX74178.1 112 YWSVYLTGNGILHTSSSQSSSATSSTQSSSTQSSSTPSSTtssTSSSRPSSSSHPPSSSHSSYNSSSSSSSSSHTPTTFASS 193
                 677777775444444444444444433333333333333233233444444444445566777888899999*******986 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.13
       SARAF 150 evkkksssssasllf......vvlvllviayivykaflaa 183
                 ++++ +++  +++++      vv+ l v++y +y+ f a+
  EPX74178.1 221 SNNSLNAGAIVGIVIgcvafaVVIALCVCLYFWYRKFKAK 260
                 2222333333333321000002233333344444444433 PP

>> Mid2  Mid2 like cell wall stress sensor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   2.4       6.1   5.2e+03      33      33 ..     144     144 ..     115     175 .. 0.54
   2 ?   15.3   0.4   1.6e-05     0.014      12      72 ..     188     249 ..     177     274 .. 0.66

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 6.1
        Mid2  33 s 33 
                 s
  EPX74178.1 144 S 144
                 1 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 1.6e-05
        Mid2  12 ktiLsdlyttvtytptataessnkskssGLskk.nrniviGcvvGigvPlllvillllyifC 72 
                  t  s +  tvt +pt++++s   s +   s+k n  +  G++vGi +  +   +++  ++C
  EPX74178.1 188 TTFASSYVRTVTPSPTSSSSSAAGSPNGNQSSKsNNSLNAGAIVGIVIGCVAFAVVIALCVC 249
                 567778889*******9999987755555544415556566666665544433333333333 PP

>> DUF4690  Small Novel Rich in Cartilage
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.8   1.2   1.8e-05     0.016      18      89 ..     179     250 ..     162     260 .. 0.65

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1.8e-05
     DUF4690  18 vsGegplesttkeresdltdlpastsele.peDtthlerldeeegslGPGaiaaiviaalLgasvllaLvvit 89 
                  s + +   tt +     t  p +ts+      + + ++  + + sl  Gai  ivi  + + +v++aL v  
  EPX74178.1 179 SSSSSSHTPTTFASSYVRTVTPSPTSSSSsAAGSPNGNQSSKSNNSLNAGAIVGIVIGCV-AFAVVIALCVCL 250
                 33333444555555666666777777655145666778889999*************875.788999*99864 PP

>> SOG2  RAM signalling pathway protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7  21.8   6.3e-05     0.053     255     358 ..     127     222 ..      98     242 .. 0.61

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 6.3e-05
        SOG2 255 spaangaqsetsersasssg.vqssasstPlgegstsppgalsrqslsttgststltsssksrsssrsntnasastprslattpappasaesfastlt. 351
                 s++++ a        +ss++ +++++sstP +++s+++++ +s++s+  ++s s+++sss+s+sss ++t  ++s  r  + tp+p++s++s+a + + 
  EPX74178.1 127 SSQSSSA--------TSSTQsSSTQSSSTPSSTTSSTSSSRPSSSSHPPSSSHSSYNSSSSSSSSSHTPTTFASSYVR--TVTPSPTSSSSSAAGSPNg 215
                 2222222........222222444556666666666665777888888888888888888888888888744333333..3344444555554333333 PP

        SOG2 352 asrintl 358
                 +++++++
  EPX74178.1 216 NQSSKSN 222
                 3333322 PP

>> DUF1180  Protein of unknown function (DUF1180)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   5.9   0.00011     0.093      21     117 ..     129     243 ..     113     265 .. 0.52

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 0.00011
     DUF1180  21 dasralspaasspeae...pPlpp.gataaespgkataieaksaqaaeggngsspragsaad...................aggslavvpelssntdkp 96 
                 + s+a+s+++ss +++    P++  ++t++  p +++   ++s+ + ++++ ss   +s+                     +++s a +p+ +++++  
  EPX74178.1 129 QSSSATSSTQSS-STQsssTPSSTtSSTSSSRPSSSSHPPSSSHSSYNSSSSSS---SSS-HtpttfassyvrtvtpsptsSSSSAAGSPNGNQSSKSN 222
                 333333332222.22211233322133333334444443333333333333333...111.12344555666788888877888888899988888888 PP

     DUF1180  97 mtlqrallvlvvvsaavivyl 117
                 ++l++  +v +v+  ++ ++ 
  EPX74178.1 223 NSLNAGAIVGIVIGCVAFAVV 243
                 898888777766654433332 PP

>> DUF347  Repeat of Unknown Function (DUF347)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.1       8.2     7e+03       1       7 [.     111     117 ..     111     119 .. 0.86
   2 ?   13.0   0.1    0.0001     0.088      22      51 ..     227     256 ..     215     257 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 8.2
      DUF347   1 lfWiaii 7  
                 l+W +++
  EPX74178.1 111 LYWSVYL 117
                 7**9997 PP

  == domain 2  score: 13.0 bits;  conditional E-value: 0.0001
      DUF347  22 qglglgyavgaaifgalllvvvlaqfltkr 51 
                  g  +g+++g + f+++++++v+++f+ ++
  EPX74178.1 227 AGAIVGIVIGCVAFAVVIALCVCLYFWYRK 256
                 456679*********************997 PP

>> Adeno_E3_CR2  Adenovirus E3 region protein CR2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   6.1   0.00014      0.12       4      36 ..     229     260 ..     227     262 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00014
  Adeno_E3_CR2   4 stiaIivaVvvGlaiIiicmlyYaCcYrkhraq 36 
                   ++++I+ + v+  ++I++c  +Y + Yrk++a+
    EPX74178.1 229 AIVGIVIGCVAFAVVIALCVCLY-FWYRKFKAK 260
                   78********************9.899999954 PP

>> Hid1  High-temperature-induced dauer-formation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   3.3   9.3e-05      0.08     587     674 ..     128     220 ..      68     232 .. 0.50

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 9.3e-05
        Hid1 587 ne.sarldsideeeeenssessrieesrsesrspslsevpelksslaitddeskaereksatessssqavs.....qlremsekarakesaest 674
                  + s+++ s +++++++ss +s + +s+s+sr  s+s++p+  s+++ +++ s+++++++ t+ +ss + +     ++++ s  +  + +++s+
  EPX74178.1 128 SQsSSATSSTQSSSTQSSSTPSSTTSSTSSSRPSSSSHPPS-SSHSSYNSSSSSSSSSHTPTTFASSYVRTvtpspTSSSSSAAGSPNGNQSSK 220
                 22122222223333333333333333333333333333333.2222222222222222233333333222222211122222222333333332 PP

>> Pox_G9-A16  Pox virus entry-fusion-complex G9/A16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.8   0.00029      0.25      14      49 ..      35      70 ..      30      95 .. 0.75
   2 ?   -3.2   0.0       7.5   6.4e+03     103     123 ..     219     240 ..     200     245 .. 0.48

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00029
  Pox_G9-A16 14 ckCvfpska.iieesekvlepreCWleeCtkrdrklL 49
                  C+  +++  ++ s ++l p++C+++ C + d ++ 
  EPX74178.1 35 FGCYQVDDSlSVKGSYQYLTPQYCYDHLC-NDDPNVA 70
                56777775415778899************.6655544 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 7.5
  Pox_G9-A16 103 vkksqelklpillpa.ivllal 123
                  k++++l+  ++ ++ i  +a+
  EPX74178.1 219 SKSNNSLNAGAIVGIvIGCVAF 240
                 2244455555444444444444 PP

>> ORC6  Origin recognition complex subunit 6 (ORC6)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   9.9   0.00022      0.19      88     180 ..     126     217 ..     118     269 .. 0.59

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00022
        ORC6  88 sssatstPskspsspst.dpkslrkqlfsTPtKsktlktalsasksssplkrrrklaneedgeeeeedapswvstsir......dsrpeisrtlspsks 179
                 ss        s+ss+ t +++s ++q  sTP++++++ +++ +s+ss p++      n  +++++++  p++   s+        ++++ s + sp+ +
  EPX74178.1 126 SS--------SQSSSATsSTQSSSTQSSSTPSSTTSSTSSSRPSSSSHPPSSSHSSYNSSSSSSSSSHTPTTFASSYVrtvtpsPTSSSSSAAGSPNGN 216
                 22........22222223456666667789999998888888888888888777777777777776667765555555444332111111111122222 PP

        ORC6 180 l 180
                 +
  EPX74178.1 217 Q 217
                 2 PP

>> DUF4614  Domain of unknown function (DUF4614)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7  23.0   0.00044      0.38       7      95 ..     128     214 ..     124     242 .. 0.62

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00044
     DUF4614   7 fessssssesessssssessssrslssssesslssksssstdsksssqssestkkrsktktrttvketavqTsdpalayqwtkaagvaa 95 
                  +sss +s+++sss++s+s  s+++ss+s+s  + +sss+ +s+s+s+ ++s+ ++s ++t tt   + v+T  p  +++ ++aag + 
  EPX74178.1 128 SQSSSATSSTQSSSTQSSSTPSSTTSSTSSS--RPSSSSHPPSSSHSSYNSSSSSSSSSHTPTTFASSYVRTVTPSPTSSSSSAAGSPN 214
                 2222223333333333333333444443433..3556666667777777888888888899**************99999888777655 PP

>> TraL  TraL protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.6   0.00053      0.45      28      57 ..     229     260 ..     224     265 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00053
        TraL  28 lvvgillg..qfviglvlglllvlllrklkkg 57 
                 ++vgi++g   f ++++l + l++++rk+k++
  EPX74178.1 229 AIVGIVIGcvAFAVVIALCVCLYFWYRKFKAK 260
                 44555555448999999*************97 PP

>> Podoplanin  Podoplanin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4  10.6    0.0012         1      28     144 ..     128     243 ..     113     254 .. 0.67

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0012
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXX-----GGG-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Podoplanin  28 peddivtpgvedekvtpGvednvvttgaseepyesglttlvpt.stesvtdlrledlptaestvkakeesqstttlnvvtshstekvgeetettvekdG 125
                  +    t++++++ +     ++ +t ++s+ + +s+  +  p  s  s  +      + +  t+ a    ++ t + + +s+s     + ++ +  ++ 
  EPX74178.1 128 SQSSSATSSTQSSSTQSSSTPSSTTSSTSSSRPSSSSHP--PSsSHSSYNSSSSSSSSSHTPTTFASSYVRTVTPSPTSSSSSAAGSPNGNQSSKSNNS 224
                 445556777777777777777777777777766654444..3314444455555555555566666666666666677777777777778999999*** PP

                 XXXXXXXXXXXXXXXXXXX CS
  Podoplanin 126 LatvtLvgiivGvllaigf 144
                 L+  ++vgi++G +    +
  EPX74178.1 225 LNAGAIVGIVIGCVAFAVV 243
                 ************7643333 PP

>> Macoilin  Macoilin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2  14.0   0.00096      0.82     305     381 ..     129     223 ..     117     298 .. 0.44

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00096
    Macoilin 305 gsesellveesvkskssssssssnknskkasagsagssnssskkhsessksvtsss..................ssknskkqklpaGkssaalkd 381
                 +s+s +  ++s++ +sss+ ss++++++++  +s++   sss++  +ss+s +sss                  +s++s     p G++s+++++
  EPX74178.1 129 QSSSATSSTQSSSTQSSSTPSSTTSSTSSSRPSSSSHPPSSSHSSYNSSSSSSSSShtpttfassyvrtvtpspTSSSSSAAGSPNGNQSSKSNN 223
                 11111111111111111111111111111111111111111111111111111111122222222233333333444444444444544443333 PP

>> DUF5585  Family of unknown function (DUF5585)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0  35.0    0.0029       2.5     103     192 ..     126     215 ..     117     245 .. 0.72

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0029
     DUF5585 103 assalttaasstsss..aassaPttvasstslsapraevsrtnasvsartaiassvaaassiPttaassavstlvpvsgtvtsavatghPsl 192
                 +ss  ++a+sst+ss    ss P   +ssts s p ++     +s+ +    +ss ++ s++Ptt ass v t++p s+t++s+ a+g P  
  EPX74178.1 126 SSSQSSSATSSTQSSstQSSSTPSSTTSSTSSSRPSSSSH-PPSSSHSSYNSSSSSSSSSHTPTTFASSYVRTVTP-SPTSSSSSAAGSPNG 215
                 4555566666665540055677888889998888866544.444555556677888999****************7.789999999999974 PP

>> Plasmodium_Vir  Plasmodium vivax Vir protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0  12.2     0.016        14     204     323 ..     105     241 ..      76     292 .. 0.69

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.016
  Plasmodium_Vir 204 lsCknk...........spkeaeeklkqekaaeapellnkekaeqgksekslgseslssekpearkgve.......eqlvhaltsassgtgndas 280
                     l+C++               +++++ ++++ ++++ ++++ ++ ++++++++ s+ +ss++p  ++          + ++h+ t+  s   ++++
      EPX74178.1 105 LKCGGDlywsvyltgngILHTSSSQSSSATSSTQSSSTQSSSTPSSTTSSTSSSRPSSSSHPPSSSHSSynsssssSSSSHTPTTFASSYVRTVT 199
                     55666566666666655333344455566666666666666666666666666666666666555555577777877777777777777777777 PP

  Plasmodium_Vir 281 pesiansssslesvseelssnfirniimaaailgtgiflfsyl 323
                     p+++++sss  +s + + s     n+ +a ai g +i +++++
      EPX74178.1 200 PSPTSSSSSAAGSPNGNQS-SKSNNSLNAGAIVGIVIGCVAFA 241
                     7777777777777666644.44556666777777777777665 PP

>> CytochromB561_N  Cytochrome B561, N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7  21.7     0.015        13     128     234 ..     129     222 ..     114     283 .. 0.59

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.015
  CytochromB561_N 128 kpPksksslqasssevlvplhqsvsssssesr.kgsdkssagsgkkleSistsskssaspsvylrsslvdlsssplssnlsaensvqsSeeids 220
                      +  ++ ss ++sss+  +    s +ss+s+sr  +s++ +++s ++ +S s+ss+ss  p ++  s    +  sp+ss +sa +s+        
       EPX74178.1 129 QSSSATSS-TQSSSTQSSSTPSSTTSSTSSSRpSSSSHPPSSSHSSYNSSSSSSSSSHTPTTFASSYVRTVTPSPTSSSSSAAGSP-------- 213
                      22222322.22222222222123333333333023333344455555666666666666666633333333444444333333333........ PP

  CytochromB561_N 221 aksspwsrkraksa 234
                           + ++++ks+
       EPX74178.1 214 -----NGNQSSKSN 222
                      .....333332222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (309 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2042  (0.113894); expected 358.6 (0.02)
Passed bias filter:                      962  (0.0536561); expected 358.6 (0.02)
Passed Vit filter:                       257  (0.0143343); expected 17.9 (0.001)
Passed Fwd filter:                        57  (0.00317921); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              21  [number of targets reported over threshold]
# CPU time: 0.93u 0.33s 00:00:01.26 Elapsed: 00:00:00.50
# Mc/sec: 1876.66
//
Query:       EPX74179.1  [L=52]
Description: hypothetical protein SOCG_03391 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (52 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       421  (0.0234815); expected 358.6 (0.02)
Passed bias filter:                      258  (0.0143901); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.25s 00:00:00.61 Elapsed: 00:00:00.41
# Mc/sec: 380.54
//
Query:       EPX74180.1  [L=727]
Description: ER associated protein disulfide isomerase Pdi2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-29  102.3   0.9    8.2e-18   64.3   0.1    3.6  3  Thioredoxin    Thioredoxin
    2.9e-15   56.7   6.1    4.6e-08   33.2   0.0    4.5  5  Thioredoxin_6  Thioredoxin-like domain
    1.8e-06   28.3   7.1      0.022   15.2   0.1    4.6  4  Thioredoxin_2  Thioredoxin-like domain
    4.1e-06   26.8   0.1       0.71   10.0   0.0    3.7  3  Thioredoxin_3  Thioredoxin domain
    0.00042   20.2   0.0       0.08   12.9   0.0    3.1  3  HyaE           Hydrogenase-1 expression protein HyaE
    0.00055   20.2   5.1       0.95    9.8   0.2    4.4  3  Thioredoxin_8  Thioredoxin-like
      0.001   18.5   1.2      0.047   13.0   0.0    2.6  3  OST3_OST6      OST3 / OST6 family, transporter family
  ------ inclusion threshold ------
      0.017   15.0   5.1       0.92    9.3   0.0    3.8  4  TraF           F plasmid transfer operon protein
       0.03   15.0   2.2      0.081   13.6   2.2    1.7  1  Ku_C           Ku70/Ku80 C-terminal arm


Domain annotation for each model (and alignments):
>> Thioredoxin  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.3   0.1   4.1e-21   8.2e-18       6     102 ..      33     133 ..      28     134 .. 0.89
   2 !   25.0   0.1   7.3e-09   1.5e-05       7      90 ..     290     370 ..     285     383 .. 0.82
   3 !    9.4   0.0   0.00052         1      57      83 ..     437     463 ..     420     486 .. 0.84

  Alignments for each domain:
  == domain 1  score: 64.3 bits;  conditional E-value: 4.1e-21
                  SHHHHHHHHTTTSSEEEEEEE-TTSHHHHCHHHHHHHHHHHCTT.....TSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTE..EEEEEESS-HHHH CS
  Thioredoxin   6 tkenFeeevakekklvlveFyApwCghCkalaPeleklaeelkd.....kvklakvdvdenedlakkyevegiPtlklfkngk..evkkyegarekek 96 
                  t+en+ + v+  +  ++++Fy+p C+ Ck++aP +e +a++ ++     ++ + +v+++e+ +l++k+e++ +Ptl++  ng+  +  ky+g+ ++++
   EPX74180.1  33 TDENYGD-VE--NARWFIKFYSPSCPACKRIAPLWEGMAKKSEEkanqaNIHIGEVNCKEHVSLCQKLEIREFPTLRFSVNGEnkQEIKYSGSTTEAS 127
                  5555543.33..4799************************99999999**********************************9777889********* PP

                  HHHHHH CS
  Thioredoxin  97 laaflk 102
                  l +f++
   EPX74180.1 128 LLDFVD 133
                  *99987 PP

  == domain 2  score: 25.0 bits;  conditional E-value: 7.3e-09
                  HHHHHHHHTTTSSEEEEEEE-TTSHHHHCHHHHHHHHHHHCTTTSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTEEEEEEES CS
  Thioredoxin   7 kenFeeevakekklvlveFyApwCghCkalaPeleklaeelkdkvklakvdvdenedlakkyevegiPtlklfkngkevkkyeg 90 
                  +e+ ++++++ +  ++v F+++ C  C +++  ++++a ++k+k+ + ++d+ +++  +++ +v+  P   +fk +++v +y g
   EPX74180.1 290 QEDIDDALSS-DVGWFVLFFSSDCKDCPNVSINWNAMAGRMKNKLNIGHIDCSKQKLSCNN-KVQKTPSSFFFKGNEYV-EYFG 370
                  5556666776.88899**************************************9888887.*******9888877754.4545 PP

  == domain 3  score: 9.4 bits;  conditional E-value: 0.00052
                  ETTTSHHHHHHTT-SSSSEEEEEETTE CS
  Thioredoxin  57 dvdenedlakkyevegiPtlklfkngk 83 
                    +++++l+kky+v+++P+l+++k+  
   EPX74180.1 437 YLTKSQQLVKKYNVNSFPKLIVVKDAT 463
                  57899*****************99876 PP

>> Thioredoxin_6  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0     0.019        38      28      86 ..      85     147 ..      72     160 .. 0.71
   2 ?   -0.4   0.0      0.46   9.2e+02      82     136 ..     288     341 ..     286     349 .. 0.83
   3 !    8.9   0.9   0.00064       1.3      15     107 ..     325     416 ..     320     431 .. 0.73
   4 !   33.2   0.0   2.3e-11   4.6e-08       6     122 ..     417     534 ..     413     550 .. 0.81
   5 !   10.9   0.0   0.00016      0.31     111     167 ..     564     625 ..     551     647 .. 0.67

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.019
                    E--HH...HHHHTT--S.SEEEEEE..TTTTEEEEEETHT--HHHHHHHHHHH---SEEE-SHHH CS
  Thioredoxin_6  28 tkske...vadklgvke.pavllfr..kfdeekvkydgekitvddlkkfieknslplvreltpen 86 
                    ++ ke   +++kl+++e p++  f   +++++++ky+g+ +t  +l +f++  + +   e+++e+
     EPX74180.1  85 VNCKEhvsLCQKLEIREfPTLR-FSvnGENKQEIKYSGS-TTEASLLDFVDARIAEAQKEIDSES 147
                    5555533367779999956654.5522455567777776.9********9998888888888775 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.46
                    -SHHHHHHHHTSS--EEEEEEE-TTSTTHHHHHHHHHHHHHHTTTT-EEEEEETT CS
  Thioredoxin_6  82 ltpenaeelfeeglppllllflkkddeeteklkkaiekvakefkdkinfaladak 136
                    +t+e  ++  ++++  ++l+f+  d ++   ++   ++ a ++k+k+n+  +d+ 
     EPX74180.1 288 VTQEDIDDALSSDVGWFVLFFSS-DCKDCPNVSINWNAMAGRMKNKLNIGHIDCS 341
                    78888888899999988888885.78888888888999*********99999987 PP

  == domain 3  score: 8.9 bits;  conditional E-value: 0.00064
                    HTTT-T.TSEEEEE--HH..HHHHTT--S.SEEEEEETTTTEEEEEETHT--HHHHHHHHHHH---SEEE-SHHHHHHHHTSS--EEEEEEE-TTS CS
  Thioredoxin_6  15 vakelkgdvrfgvtkske..vadklgvke.pavllfrkfdeekvkydgekitvddlkkfieknslplvreltpenaeelfeeglppllllflkkdd 107
                    +a ++k+++  g++  ++  ++   +v++ p+  +f++  +e v+y g  ++v dl++f e++    +re+ +    e +e+   +++l+f++  +
     EPX74180.1 325 MAGRMKNKLNIGHIDCSKqkLSCNNKVQKtPSSFFFKG--NEYVEYFGL-FKVGDLTSFAEEAANFEIREVEFFDTTE-SEKHGDVFFLYFYDDKS 416
                    56677777777776422222444467777699999998..778*****9.**********************877777.46666889999985432 PP

  == domain 4  score: 33.2 bits;  conditional E-value: 2.3e-11
                    STHHHHHHHHTTT-T.TSEEEEE--HHHHHHTT--S.SEEEEEETTTTEEEEEETH....T--HHHHHHHHHHH---SEEE-SHHHHHHHHTSS-- CS
  Thioredoxin_6   6 keeseiFekvakelkgdvrfgvtkskevadklgvke.pavllfrkfdeekvkydge....kitvddlkkfieknslplvreltpenaeelfeeglp 96 
                     +   + +k + +l g+ r + tks  +++k++v + p+++++++ + +   y+ +     +++  + +++++n lp+ +el   n +e+ +++  
     EPX74180.1 417 VDSLATIRKTGIQLLGHARLYLTKSQQLVKKYNVNSfPKLIVVKDATPS--YYPTSvasdITDYRRILNWMKNNWLPVLPELQTSNSDEIANTD-- 508
                    55566667888899999***************************94443..44444446588********************************.. PP

                    EEEEEEE-TTSTTHHHHHHHHHHHHH CS
  Thioredoxin_6  97 pllllflkkddeeteklkkaiekvak 122
                    +++l++l+ d  +  + k++ + +a 
     EPX74180.1 509 TVVLFLLDPDLPDFPETKATARTIAS 534
                    67888888887777777666666665 PP

  == domain 5  score: 10.9 bits;  conditional E-value: 0.00016
                    HHHHHHHHHHHHHT.....TTT-EEEEEETTGGHHHHHHTT--G.GG-SEEEEEESSSS-EEE CS
  Thioredoxin_6 111 eklkkaiekvakef.....kdkinfaladaksfkrpleylglss.sdlPvivivdsashkyky 167
                    ek  ++  ++a+++     + +  fa++++ ++++ l+ ++ +  +++P +v++d a +++++
     EPX74180.1 564 EKNDAEALEAARNMnvkhkPASKRFAWVNGNYWAKWLNNFNFDIkNSGPRVVLYD-AGKNLYW 625
                    333333344444442222333457****************99998**********.5554444 PP

>> Thioredoxin_2  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.1   1.1e-05     0.022       8     103 ..      45     126 ..      41     132 .. 0.64
   2 ?    4.1   0.2     0.031        63      36      95 ..     328     367 ..     301     381 .. 0.64
   3 !    9.1   0.0   0.00088       1.8      65     100 ..     425     467 ..     380     474 .. 0.72
   4 ?   -0.5   0.1      0.83   1.7e+03      35      81 ..     543     582 ..     507     587 .. 0.54

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.1e-05
  Thioredoxin_2   8 vlvvftdpdCpyCkklkkelkelddvtvrvllfplkpsfepkavaiwcakekkkafkdieenvelarkygvrgtPtiv.fldgk.eivarlpGyvp 101
                     ++ f++p+Cp Ck++    + +    ++      +++++++ ++i   +         +e+v l +k+++r++Pt+    +g+ +   ++ G ++
     EPX74180.1  45 WFIKFYSPSCPACKRIAPLWEGM---AKK-----SEEKANQANIHIGEVN--------CKEHVSLCQKLEIREFPTLRfSVNGEnKQEIKYSGSTT 124
                    56779**********98855555...333.....2222223333332222........456778************65388888755557777666 PP

  Thioredoxin_2 102 ae 103
                    ++
     EPX74180.1 125 EA 126
                    65 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.031
  Thioredoxin_2  36 rvllfplkpsfepkavaiwcakekkkafkdieenvelarkygvrgtPtivfldgkeivar 95 
                    r     +k++    + +i+c+k+k            l+   +v+ tP+ +f+ g+ ++ +
     EPX74180.1 328 R-----MKNK--LNIGHIDCSKQK------------LSCNNKVQKTPSSFFFKGN-EYVE 367
                    4.....4444..556667777766............788889**********999.4444 PP

  == domain 3  score: 9.1 bits;  conditional E-value: 0.00088
  Thioredoxin_2  65 d............ieenvelarkygvrgtPt.ivfldgkeivarlpGyv 100
                    +            ++++++l++ky+v+++P  iv+ d++      p y+
     EPX74180.1 425 KtgiqllgharlyLTKSQQLVKKYNVNSFPKlIVVKDAT------PSYY 467
                    04444466677778999**************66688888......5555 PP

  == domain 4  score: -0.5 bits;  conditional E-value: 0.83
  Thioredoxin_2  35 vrvllfp..lkpsfepkavaiwcakekkkafkdieenvelarkygvrgt 81 
                    ++    +   k++ ++k +++ +a+ek+      +e  e ar ++v+  
     EPX74180.1 543 EY----QmaWKEETDKKNAHLNKAEEKN-----DAEALEAARNMNVKHK 582
                    11....2224444444444455555544.....5677777777777655 PP

>> Thioredoxin_3  Thioredoxin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0   0.00093       1.9       3      60 ..      47     114 ..      46     132 .. 0.76
   2 !   10.0   0.0   0.00036      0.71       6      63 ..     308     370 ..     304     380 .. 0.81
   3 ?    3.5   0.0     0.037        73      37      55 ..     439     458 ..     422     463 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00093
                    EEEESSSSTTCHHHHHHHHHHCHCCTCEC........EEECCTTHHHHHHCT-SSSSEE..ECTTCEE CS
  Thioredoxin_3   3 ikvlgpgCakCpklekavkeaaaekgika........evekvtdfeeiekygVmsvPal..vidgkvv 60 
                    ik  +p+C+ C++++ +++ +a++++ ka        ev   ++++  +k +++  P+l   ++g+ +
     EPX74180.1  47 IKFYSPSCPACKRIAPLWEGMAKKSEEKAnqanihigEVNCKEHVSLCQKLEIREFPTLrfSVNGENK 114
                    56679*******99999999999887777777776666666666666699999999999877887643 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00036
                    ESSSSTTCHHHHHHHHHHCHCCTCECEEECC.TTHHHH.HHCT-SSSSEEEC...TTCEEEES CS
  Thioredoxin_3   6 lgpgCakCpklekavkeaaaekgikaevekv.tdfeei.ekygVmsvPalvi...dgkvvvsG 63 
                    +++ C+ Cp+++ +++++a +++ k+++ ++    +++  +++V+++P+ +    +++v++ G
     EPX74180.1 308 FSSDCKDCPNVSINWNAMAGRMKNKLNIGHIdCSKQKLsCNNKVQKTPSSFFfkgNEYVEYFG 370
                    5899**************************9666777899********985433346666666 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.037
                    TTHHHH.HHCT-SSSSEEEC CS
  Thioredoxin_3  37 tdfeei.ekygVmsvPalvi 55 
                    t+++++ +ky+V s P+l++
     EPX74180.1 439 TKSQQLvKKYNVNSFPKLIV 458
                    6778888***********54 PP

>> HyaE  Hydrogenase-1 expression protein HyaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.0     4e-05      0.08      13      97 ..     287     367 ..     282     374 .. 0.84
   2 ?    3.5   0.0     0.035        69      70      93 ..     439     462 ..     420     471 .. 0.89
   3 ?   -3.2   0.0       4.1   8.1e+03      20      44 ..     502     526 ..     493     534 .. 0.62

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 4e-05
                 EE-CCCHHHHHHH.HSEEEEEESS-SS-SSSSS-HCHHHHHHHCT-TTS-EEEEEETHHHHHHHHHCCT-TSSSEEEEEETTEEEE CS
        HyaE  13 evdadtlddflka.agdavlllagDpkrfpEvsDvaVvlpEllkaFpnalraavvadreqeealaerfgvlktPsllflrdgeylg 97 
                  v ++++dd l+   g  vl++++D k  p vs ++  ++      +n l++  +     +++l  + +v+ktPs  f++++ey+ 
  EPX74180.1 287 LVTQEDIDDALSSdVGWFVLFFSSDCKDCPNVSINWNAMAG---RMKNKLNIGHID--CSKQKLSCNNKVQKTPSSFFFKGNEYVE 367
                 6889999999987689***************9999987765...555666777776..66789999****************9985 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.035
                 HHHHHHHHCCT-TSSSEEEEEETT CS
        HyaE  70 eqeealaerfgvlktPsllflrdg 93 
                  ++++l ++++v  +P l++++d 
  EPX74180.1 439 TKSQQLVKKYNVNSFPKLIVVKDA 462
                 57899***************9985 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 4.1
                 HHHHHHHSEEEEEESS-SS-SSSSS CS
        HyaE  20 ddflkaagdavlllagDpkrfpEvs 44 
                 d+  ++ +  + ll  D   fpE+ 
  EPX74180.1 502 DEIANTDTVVLFLLDPDLPDFPETK 526
                 5555555555556666767788876 PP

>> Thioredoxin_8  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.053   1.1e+02       6      35 ..      47      76 ..      45     118 .. 0.75
   2 !    5.8   0.2    0.0088        17       6      58 ..     305     355 ..     302     374 .. 0.84
   3 !    9.8   0.2   0.00048      0.95      48      90 ..     417     460 ..     390     463 .. 0.68

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.053
                   EEE--SSSHHHHHHHHHHHHHHHHHHH.TTS CS
  Thioredoxin_8  6 Lyfgaswcppckaftpklkelyeklkk.kkk 35
                   + f++  cp ck++ p    + +k ++ + +
     EPX74180.1 47 IKFYSPSCPACKRIAPLWEGMAKKSEEkA-N 76
                   57999999999999999999888888642.2 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0088
                    EEE--SSSHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-SS-HHHHHHHGGGS- CS
  Thioredoxin_8   6 Lyfgaswcppckaftpklkelyeklkkkkkveivyvsldkkeeefekylkknk 58 
                    + f++s+c++c ++  + +++  ++k  +k++i ++ + k++ ++++ ++k++
     EPX74180.1 305 VLFFSSDCKDCPNVSINWNAMAGRMK--NKLNIGHIDCSKQKLSCNNKVQKTP 355
                    5566668******************9..9**********99999999999983 PP

  == domain 3  score: 9.8 bits;  conditional E-value: 0.00048
                    HHHHHHGGGS-TTSE.E.EE-TT-HHHHTT-S--TT-SEEEEE- CS
  Thioredoxin_8  48 eefekylkknkkpwl.svpfddkkrnklkkkynvkaiPtlvvld 90 
                     +  ++++k++ + l + +    k+++l kkynv+++P+l+v++
     EPX74180.1 417 VDSLATIRKTGIQLLgHARLYLTKSQQLVKKYNVNSFPKLIVVK 460
                    55555555554443313345557799****************97 PP

>> OST3_OST6  OST3 / OST6 family, transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.0   2.3e-05     0.047      45     136 ..      53     135 ..      49     169 .. 0.79
   2 ?   -3.4   0.1       2.4   4.9e+03      46     104 ..     312     362 ..     309     373 .. 0.60
   3 ?    3.5   0.0     0.019        39      79     108 ..     436     464 ..     429     515 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2.3e-05
   OST3_OST6  45 kCelCrefepefelvakswrkdekskskklfFakvdfdegkdvFqklglnsaPhlllfppkkgpkeskkkdtydfsrggfdaealakfiser 136
                  C  C+ ++p +e +ak   ++  +++ ++  ++v+ +e  ++ qkl++++ P l +    + +k   ++ +y     + + ++l +f+  r
  EPX74180.1  53 SCPACKRIAPLWEGMAKKSEEK--ANQANIHIGEVNCKEHVSLCQKLEIREFPTLRFSVNGE-NK---QEIKYSG---STTEASLLDFVDAR 135
                 6*****************9999..589***************************99877733.33...3444433...33444455555544 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2.4
   OST3_OST6  46 CelCrefepefelvakswrkdekskskklfFakvdfdegkdvFqklglnsaPhlllfpp 104
                 C+ C ++  +++++a  +++       kl  +++d ++ k   +  ++++ P  ++f+ 
  EPX74180.1 312 CKDCPNVSINWNAMAGRMKN-------KLNIGHIDCSKQKLSCNN-KVQKTPSSFFFKG 362
                 55555555555555555544.......466666666665555554.6666666666665 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.019
   OST3_OST6  79 vdfdegkdvFqklglnsaPhlllfppkkgp 108
                 + + +++++++k+++ns P+l++++ ++ p
  EPX74180.1 436 LYLTKSQQLVKKYNVNSFPKLIVVKDAT-P 464
                 667899******************9844.3 PP

>> TraF  F plasmid transfer operon protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.0   0.00046      0.92     133     196 ..      46     105 ..      39     128 .. 0.76
   2 ?    1.1   0.0      0.15     3e+02     101     154 ..     274     325 ..     269     355 .. 0.71
   3 ?    3.9   0.0     0.021        42     180     209 ..     440     469 ..     428     473 .. 0.84
   4 ?   -2.7   1.6       2.1   4.2e+03      28      54 ..     538     564 ..     517     588 .. 0.60

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00046
        TraF 133 LlfFyrgkcpyceaqapilqafadkyglevraVsvdgrplpelpnarvdkgqaarlgvkrtPal 196
                 ++ Fy+++cp+c+  ap  + +a+k + +    ++  +      n + + +  ++l+++++P+l
  EPX74180.1  46 FIKFYSPSCPACKRIAPLWEGMAKKSEEKANQANIHIGEV----NCKEHVSLCQKLEIREFPTL 105
                 577********************99877766666665544....34456666777777777777 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.15
        TraF 101 rrPvsnlarkvlndarkeekeaalkklakeygLlfFyrgkcpyceaqapilqaf 154
                   P+ n+a + +  + +e++++al++  +   +++F++++c+ c   +   +a+
  EPX74180.1 274 SQPIFNPAGRSKPLVTQEDIDDALSSDVGW--FVLFFSSDCKDCPNVSINWNAM 325
                 567777888888888888888888764444..5667889998887665555555 PP

  == domain 3  score: 3.9 bits;  conditional E-value: 0.021
        TraF 180 vdkgqaarlgvkrtPalvlvdpksqkvvpv 209
                 ++++  ++++v+++P l++v+  +  ++p 
  EPX74180.1 440 KSQQLVKKYNVNSFPKLIVVKDATPSYYPT 469
                 5667778***************99998875 PP

  == domain 4  score: -2.7 bits;  conditional E-value: 2.1
        TraF  28 alkeptseesatesaaelrkeleelld 54 
                 ++++++++  ++e+ ++ +++l+++++
  EPX74180.1 538 NKESQEYQMAWKEETDKKNAHLNKAEE 564
                 444455555555555555555555443 PP

>> Ku_C  Ku70/Ku80 C-terminal arm
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   2.2   4.1e-05     0.081      24      83 ..     515     585 ..     512     588 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 4.1e-05
                 TT---..---SS--HH...HHHHHHH-....HHHHHHHHHHHHH..HHHHH..............---THH CS
        Ku_C  24 ldedlpeeledktlpk...yeaidkragslleewkelfeleeedkekkkekrkaed........edeepaa 83 
                 ld+dlp+ +e k + +    ++++k+ +++ + wke+ +++++ ++k++ek++ae            +pa+
  EPX74180.1 515 LDPDLPDFPETKATARtiaSDWLNKESQEYQMAWKEETDKKNAHLNKAEEKNDAEAleaarnmnVKHKPAS 585
                 89999994444444444567************************999999988887765555432444455 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (727 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1030  (0.0574488); expected 358.6 (0.02)
Passed bias filter:                      531  (0.0296168); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.70u 0.28s 00:00:00.98 Elapsed: 00:00:00.46
# Mc/sec: 4764.56
//
Query:       EPX74181.1  [L=921]
Description: U3 snoRNA associted protein Dip2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.3e-47  158.0  25.2     0.0001   23.0   0.0   12.0 11  WD40           WD domain, G-beta repeat
    1.3e-16   60.9   0.3    2.3e-16   60.0   0.3    1.4  1  Utp12          Dip2/Utp12 Family
      7e-12   45.5   2.0      0.053   13.8   0.0    8.2  9  ANAPC4_WD40    Anaphase-promoting complex subunit 4 WD40 doma
    2.6e-07   29.7   2.0       0.49    9.0   0.0    4.6  4  Nup160         Nucleoporin Nup120/160
    1.9e-05   23.8   0.6          2    7.3   0.0    5.9  7  Ge1_WD40       WD40 region of Ge1, enhancer of mRNA-decapping
     0.0044   15.8   0.3        2.5    6.7   0.0    4.1  4  Nucleoporin_N  Nup133 N terminal like
  ------ inclusion threshold ------
       0.01   14.9   0.5       0.19   10.7   0.0    2.7  3  Coatomer_WDAD  Coatomer WD associated region
      0.047   13.0   0.1        2.1    7.6   0.0    3.1  4  Nbas_N         Neuroblastoma-amplified sequence, N terminal
      0.089   12.1   0.0         23    4.2   0.0    3.3  3  WD40_like      WD40-like domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.2   0.00068       1.4      13      38 .]      69      92 ..      53      92 .. 0.74
   2 !   23.0   0.0     5e-08    0.0001       1      38 []      94     132 ..      94     132 .. 0.93
   3 !    7.9   0.0     0.003       5.9       6      38 .]     141     201 ..     136     201 .. 0.61
   4 !   16.2   0.3   7.1e-06     0.014       5      37 ..     206     242 ..     203     243 .. 0.80
   5 ?   -0.4   0.0       1.3   2.6e+03      15      36 ..     275     296 ..     260     298 .. 0.79
   6 !   20.0   0.0   4.7e-07   0.00093       4      38 .]     388     422 ..     385     422 .. 0.92
   7 !   22.0   0.1   1.1e-07   0.00022       7      38 .]     472     504 ..     466     504 .. 0.89
   8 !    6.7   0.0    0.0073        14      17      37 ..     540     560 ..     523     560 .. 0.79
   9 !   19.0   0.0   9.7e-07    0.0019       7      37 ..     571     602 ..     565     602 .. 0.91
  10 !   16.8   0.1   4.5e-06    0.0091       3      38 .]     609     645 ..     607     645 .. 0.88
  11 !   21.8   0.6   1.2e-07   0.00024       3      37 ..     651     684 ..     649     684 .. 0.91

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00068
                EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40 13 vtslafspdgawlasGsdDgtvriWd 38
                v++l    +g+  a+G +Dg++r+W+
  EPX74181.1 69 VSCL--TNHGDVYAAGYEDGSIRLWK 92
                7888..55555557899********6 PP

  == domain 2  score: 23.0 bits;  conditional E-value: 5e-08
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 g++l tl GH s v+ + f++ g+ lasGs+D  + +Wd
  EPX74181.1  94 GELLLTLNGHkSAVSTMVFDQTGTRLASGSKDTDIILWD 132
                 57899*****666*************************9 PP

  == domain 3  score: 7.9 bits;  conditional E-value: 0.003
                 EEESSSS.EEEEE............................EETTSSEEEEEETTSEEEEEE CS
        WD40   6 tltGHss.vtsla............................fspdgawlasGsdDgtvriWd 38 
                  l+GH++ vt l                             ++ d+  l+s+++D  +++Wd
  EPX74181.1 141 RLRGHKDqVTKLIflsprevnedgtadgvedgattsmeidaTNADQY-LLSSGKDSFLKLWD 201
                 56777444777766666665555555555555555555554444444.557888*******9 PP

  == domain 4  score: 16.2 bits;  conditional E-value: 7.1e-06
                 EEEESS.SS...EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   5 rtltGH.ss...vtslafspdgawlasGsdDgtvriW 37 
                 +  ++H ++   ++ +++spdg+  +++s D  v++W
  EPX74181.1 206 HCVETHvNHqgeIWTMSVSPDGKRCLTASSDADVKVW 242
                 555667666667************887777******* PP

  == domain 5  score: -0.4 bits;  conditional E-value: 1.3
                 EEEEETTSSEEE.EEETTSEEEE CS
        WD40  15 slafspdgawla.sGsdDgtvri 36 
                 sl+f+++g++++  ++ D+ + i
  EPX74181.1 275 SLDFHDSGRFVVfQAH-DRLIEI 296
                 899*******863247.887777 PP

  == domain 6  score: 20.0 bits;  conditional E-value: 4.7e-07
                 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                   +l GH  +v+ la s++  +++sG  +g+++iW+
  EPX74181.1 388 SIELPGHrADVRTLALSSNYEMVLSGA-NGSLKIWN 422
                 56799**999***************99.*******8 PP

  == domain 7  score: 22.0 bits;  conditional E-value: 1.1e-07
                 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 + +H +++++la  ++g+++a++s D+t+++W+
  EPX74181.1 472 IQAHnGPIWDLAIGHNGSYFATASADKTLKLWS 504
                 569*777*************************5 PP

  == domain 8  score: 6.7 bits;  conditional E-value: 0.0073
                 EEETTSSEEEEEETTSEEEEE CS
        WD40  17 afspdgawlasGsdDgtvriW 37 
                   spdg++++++  D+tv+++
  EPX74181.1 540 TISPDGRLITASLLDNTVKVY 560
                 36******976657*****97 PP

  == domain 9  score: 19.0 bits;  conditional E-value: 9.7e-07
                 EESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   7 ltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 l GH  +v s++  +d+++la++s D++v++W
  EPX74181.1 571 LYGHkLPVLSMDIAHDSKLLATCSADKNVKLW 602
                 679*777************************* PP

  == domain 10  score: 16.8 bits;  conditional E-value: 4.5e-06
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 c +++ +H +sv  +af+p ++ ++++s+D+ vr Wd
  EPX74181.1 609 CHKSIFAHqDSVMKVAFQPGSRNFFTCSKDKEVRYWD 645
                 55666689888*************************9 PP

  == domain 11  score: 21.8 bits;  conditional E-value: 1.2e-07
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 ++ +l+GH s v+sla+ p + +  +Gs D+++r+W
  EPX74181.1 651 LILKLRGHhSEVWSLAVAPTSVY--TGSHDHSIRVW 684
                 567899**888************..8*99******* PP

>> Utp12  Dip2/Utp12 Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.0   0.3   1.2e-19   2.3e-16       2     106 ..     788     889 ..     787     890 .. 0.97

  Alignments for each domain:
  == domain 1  score: 60.0 bits;  conditional E-value: 1.2e-19
                 HHHHHH.HHHSS-TTTHHHHHHCS-CTCHHHHHHHHHHHH.HTTTTHHHHHHHHHHHHHHHHHHHHHSH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       Utp12   2 deelleevlekippsdirltvlrLpssyvlkLLeflaerlaeksphlelllrwlkallrvHgsylvaspsdlvpaLrslqkslrerlktlskllglnlg 100
                 +e++l+ +++k+++s +++++l+Lp+  vl L++f+  ++ +k++ + l+ r++++ll++ +++l+a+ + ++p L++++ slr  l + ++l+g+nl+
  EPX74181.1 788 EEYVLN-TFKKVRTSHLDDALLVLPFDQVLSLFRFVDIWA-SKKWSIPLISRIIFFLLKTYHRQLTATIK-MRPLLNNIRNSLRGSLVEERSLVGYNLA 883
                 789999.*******************************99.**************************996.**************************** PP

                 HHHHHH CS
       Utp12 101 rLdyll 106
                 +L yl+
  EPX74181.1 884 GLTYLR 889
                 ****97 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.0   2.7e-05     0.053       8      88 ..      77     153 ..      70     156 .. 0.84
   2 ?    2.5   0.0      0.09   1.8e+02      24      66 ..     202     243 ..     188     246 .. 0.80
   3 ?   -0.6   0.0      0.83   1.7e+03      43      76 ..     275     308 ..     255     323 .. 0.81
   4 ?    2.3   0.0      0.11   2.1e+02      39      71 ..     339     373 ..     332     390 .. 0.80
   5 ?    3.9   0.0     0.034        67      37      80 ..     394     436 ..     381     444 .. 0.81
   6 ?    3.5   0.0     0.044        88      46      81 ..     442     477 ..     435     487 .. 0.79
   7 ?    1.7   0.0      0.16   3.2e+02      59      81 ..     455     477 ..     449     507 .. 0.49
   8 ?    0.8   0.0      0.32   6.3e+02      45      69 ..     540     564 ..     518     574 .. 0.81
   9 !    8.0   0.0    0.0017       3.4       9      90 ..     547     626 ..     539     628 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 2.7e-05
  ANAPC4_WD40   8 DLiAlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclg 88 
                  D  A + edg++++   +g+ + tl  ++++s v+ + + + g+ La + +d+ + l d+ +++ +  l+ ++++ vt+l 
   EPX74181.1  77 DVYAAGYEDGSIRLWK-EGELLLTL--NGHKSAVSTMVFDQTGTRLASGSKDTDIILWDVVNETGLYRLRGHKDQ-VTKLI 153
                  6677777777777764.67777777..899***************************************999995.88875 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.09
  ANAPC4_WD40  24 lngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlld 66 
                  l+ q+ +++ + ++++e+  ++ +pdgk    a sd  v++ +
   EPX74181.1 202 LSIQHCVET-HVNHQGEIWTMSVSPDGKRCLTASSDADVKVWE 243
                  444555555.7899***********************999876 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.83
  ANAPC4_WD40  43 sLaWkpdgklLavaysdgevrlldaesgkvvhsl 76 
                  sL ++ +g++ ++  +d  ++++ + +   ++++
   EPX74181.1 275 SLDFHDSGRFVVFQAHDRLIEIFRIRTPSEMEKI 308
                  7999**************9999998876666555 PP

  == domain 4  score: 2.3 bits;  conditional E-value: 0.11
  ANAPC4_WD40  39 sevrsLaWkpd..gklLavaysdgevrlldaesgk 71 
                  s+v+s++W p   + +++v+ +++++++++++s+ 
   EPX74181.1 339 SRVSSFSWIPHrrNPIFVVSLQNNSIEVHNVNSKA 373
                  6799999976511669**************99875 PP

  == domain 5  score: 3.9 bits;  conditional E-value: 0.034
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvks 80 
                  +   vr La + + ++   + ++g++++ + ++g ++++++++ 
   EPX74181.1 394 HRADVRTLALSSNYEMV-LSGANGSLKIWNHKTGSCIRTFDCGY 436
                  66778888888887765.56689*****************9986 PP

  == domain 6  score: 3.5 bits;  conditional E-value: 0.044
  ANAPC4_WD40  46 WkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  + + +k +  + + ge++l+d+ s  +++ +++++ 
   EPX74181.1 442 FVNADKQILSVNKAGEIELFDVASSSLLERIQAHNG 477
                  556667777788899999999999999999999876 PP

  == domain 7  score: 1.7 bits;  conditional E-value: 0.16
  ANAPC4_WD40  59 dgevrlldaesgkvvhslsvkse 81 
                   ge++l+d+ s  +++ +++++ 
   EPX74181.1 455 AGEIELFDVASSSLLERIQAHNG 477
                  45555555555555555554443 PP

  == domain 8  score: 0.8 bits;  conditional E-value: 0.32
  ANAPC4_WD40  45 aWkpdgklLavaysdgevrlldaes 69 
                    +pdg+l+  +  d++v+++   +
   EPX74181.1 540 TISPDGRLITASLLDNTVKVYYLDT 564
                  5689***************987665 PP

  == domain 9  score: 8.0 bits;  conditional E-value: 0.0017
  ANAPC4_WD40   9 LiAlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  Li     d+ + v+ l+  + +     +++  v s+   +d klLa   +d +v+l     g++ +s+ +++++ v+++ ++
   EPX74181.1 547 LITASLLDNTVKVYYLDTLKFFLN-LYGHKLPVLSMDIAHDSKLLATCSADKNVKLWGLDFGDCHKSIFAHQDS-VMKVAFQ 626
                  666666677777777777766655.57889999***********************************999995.9988875 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.0   0.00025      0.49     209     279 ..     165     239 ..     126     294 .. 0.77
   2 !    8.1   0.0   0.00045       0.9     238     259 ..     414     435 ..     385     459 .. 0.86
   3 ?    1.7   0.0     0.039        78     231     248 ..     489     506 ..     482     508 .. 0.87
   4 !    6.0   0.0     0.002         4     222     288 ..     580     639 ..     536     645 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00025
                 S---TT-ECEEEEET.....TTTEEEEEETT-EEEEEETTTTEEEEE.EE--.....-SSSTTS--SSEESEEESS CS
      Nup160 209 rksgasvalsldvavavveigqtylfalsrdgkLrvWnlltgkclat.idll....rdeeaqdessskstldpaes 279
                 +  g+   +++++ ++ ++ +++yl++   d +L++W+l+ + c++t  + +    +  +++d +++ + +++a+ 
  EPX74181.1 165 TADGVEDGATTSMEIDATN-ADQYLLSSGKDSFLKLWDLSIQHCVEThVNHQgeiwTMSVSPDGKRCLTASSDADV 239
                 4556666778888888888.***************************77776777766677777777766666665 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.00045
                 TT-EEEEEETTTTEEEEEEE-- CS
      Nup160 238 rdgkLrvWnlltgkclatidll 259
                  +g L++Wn +tg+c++t+d+ 
  EPX74181.1 414 ANGSLKIWNHKTGSCIRTFDCG 435
                 699****************996 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.039
                 TEEEEEETT-EEEEEETT CS
      Nup160 231 tylfalsrdgkLrvWnll 248
                 +y +++s d++L++W+l+
  EPX74181.1 489 SYFATASADKTLKLWSLK 506
                 6789************96 PP

  == domain 4  score: 6.0 bits;  conditional E-value: 0.002
                 ET.....TTTEEEEEETT-EEEEEETTTTEEEEEEE--.-SSSTTS--SSEESEEESSSSEEEE... CS
      Nup160 222 avavveigqtylfalsrdgkLrvWnlltgkclatidllrdeeaqdessskstldpaesslirvsdgg 288
                 ++++++ ++++l++ s d+++++W l+ g c  +i         ++s+ k   +p + ++  +s+++
  EPX74181.1 580 SMDIAH-DSKLLATCSADKNVKLWGLDFGDCHKSIFAH------QDSVMKVAFQPGSRNFFTCSKDK 639
                 567788.***********************99999888......56666667777777777777665 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0     0.024        48     169     217 ..      85     134 ..      71     164 .. 0.79
   2 !    7.3   0.0     0.001         2     182     217 ..     210     245 ..     182     254 .. 0.87
   3 ?    0.6   0.0      0.11   2.2e+02     263     283 ..     412     432 ..     404     444 .. 0.83
   4 ?    0.2   0.0      0.14   2.8e+02     181     215 ..     469     504 ..     446     513 .. 0.77
   5 ?    2.8   0.0     0.024        47     187     215 ..     533     561 ..     509     570 .. 0.79
   6 ?   -1.2   0.0      0.38   7.6e+02     193     218 ..     581     606 ..     563     618 .. 0.65
   7 ?   -3.2   0.0       1.5   3.1e+03     132     163 ..     636     668 ..     631     682 .. 0.65

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.024
    Ge1_WD40 169 sgelsveeieegllkieeh.sliveaafspdGtalatasedGevkffqvy 217
                  g+++  +  e ll ++ h s +++ +f   Gt la  s+d  + ++ v 
  EPX74181.1  85 DGSIRLWKEGELLLTLNGHkSAVSTMVFDQTGTRLASGSKDTDIILWDVV 134
                 5555555556667788887459999*****************99999885 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.001
    Ge1_WD40 182 lkieehsliveaafspdGtalatasedGevkffqvy 217
                  +++++ +i + ++spdG    tas+d  vk + + 
  EPX74181.1 210 THVNHQGEIWTMSVSPDGKRCLTASSDADVKVWEIS 245
                 46778889*************************996 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.11
    Ge1_WD40 263 adnnselklWscelWtClqti 283
                 + +n  lk+W+ ++ +C++t 
  EPX74181.1 412 SGANGSLKIWNHKTGSCIRTF 432
                 567999************997 PP

  == domain 4  score: 0.2 bits;  conditional E-value: 0.14
    Ge1_WD40 181 llkieehs.liveaafspdGtalatasedGevkffq 215
                 l +i+ h   i + a+  +G   atas+d ++k++ 
  EPX74181.1 469 LERIQAHNgPIWDLAIGHNGSYFATASADKTLKLWS 504
                 346777766899999999************999996 PP

  == domain 5  score: 2.8 bits;  conditional E-value: 0.024
    Ge1_WD40 187 hsliveaafspdGtalatasedGevkffq 215
                    +  +++spdG  + ++  d +vk + 
  EPX74181.1 533 ADDVLATTISPDGRLITASLLDNTVKVYY 561
                 3348899*******************995 PP

  == domain 6  score: -1.2 bits;  conditional E-value: 0.38
    Ge1_WD40 193 aafspdGtalatasedGevkffqvyl 218
                   ++ d   lat+s+d  vk++ + +
  EPX74181.1 581 MDIAHDSKLLATCSADKNVKLWGLDF 606
                 55666777777777777777775544 PP

  == domain 7  score: -3.2 bits;  conditional E-value: 1.5
    Ge1_WD40 132 eedae.esdddeaskllvltrgdkaeiwsvdmi 163
                 ++d+e    d ++  l++ +rg+++e+ws+++ 
  EPX74181.1 636 SKDKEvRYWDGDTFDLILKLRGHHSEVWSLAVA 668
                 444442233445566777789999999998875 PP

>> Nucleoporin_N  Nup133 N terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.24   4.8e+02     201     231 ..     171     203 ..     165     212 .. 0.78
   2 !    6.7   0.0    0.0013       2.5     199     236 ..     213     250 ..     182     280 .. 0.83
   3 ?    2.3   0.0     0.028        56     197     232 ..     472     507 ..     441     528 .. 0.82
   4 ?    0.5   0.1     0.097   1.9e+02     198     229 ..     656     685 ..     609     718 .. 0.79

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.24
                    GG-EEEEEEECCTCEEEEEETT..SEEEEEEEE CS
  Nucleoporin_N 201 reeivqlridssrrilytlssk..gvirvydls 231
                    + ++++++id +  ++y+lss+  + ++ +dls
     EPX74181.1 171 DGATTSMEIDATNADQYLLSSGkdSFLKLWDLS 203
                    67789********99999998611557799888 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0013
                    --GG-EEEEEEECCTCEEEEEETTSEEEEEEEETTCEE CS
  Nucleoporin_N 199 sereeivqlridssrrilytlsskgvirvydlsasnge 236
                    + + ei+ + +++  ++  t+ss+  ++v+++s+++++
     EPX74181.1 213 NHQGEIWTMSVSPDGKRCLTASSDADVKVWEISFPADG 250
                    6789*****************************99874 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.028
                    ----GG-EEEEEEECCTCEEEEEETTSEEEEEEEET CS
  Nucleoporin_N 197 gasereeivqlridssrrilytlsskgvirvydlsa 232
                    ++  + +i+ l+i++      t+s++++++ + l +
     EPX74181.1 472 IQAHNGPIWDLAIGHNGSYFATASADKTLKLWSLKP 507
                    5668899*************************9984 PP

  == domain 4  score: 0.5 bits;  conditional E-value: 0.097
                    ---GG-EEEEEEECCTCEEEEEETTSEEEEEE CS
  Nucleoporin_N 198 asereeivqlridssrrilytlsskgvirvyd 229
                       ++e+++l++ ++   +yt s ++ irv+ 
     EPX74181.1 656 RGHHSEVWSLAVAPT--SVYTGSHDHSIRVWA 685
                    456788899999997..799999999999996 PP

>> Coatomer_WDAD  Coatomer WD associated region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.08   1.6e+02      70     108 ..     340     380 ..     251     386 .. 0.75
   2 ?   10.7   0.0   9.7e-05      0.19      87     168 ..     414     500 ..     401     544 .. 0.84
   3 ?   -2.2   0.2      0.77   1.5e+03     164     201 ..     705     739 ..     669     749 .. 0.60

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.08
                    XXXXXXXXX..XXX.XXXXXXXXXXXX.XXXXXXXXXXXXXX CS
  Coatomer_WDAD  70 kgldfvwvs..snr.favlessksvkifknfkekktksikle 108
                      ++f w++  +n  f+v  +++s+++ +n+++k   s  l+
     EPX74181.1 340 RVSSFSWIPhrRNPiFVVSLQNNSIEV-HNVNSKADASTPLT 380
                    457899**9865657888888******.99888876666555 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 9.7e-05
                    XXXXXXX.XXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXX.XXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXX CS
  Coatomer_WDAD  87 ssksvkifknfkekktksikleyqvdkifg...GalLgvksegsvsfYDweqgklvrridvkk..vknVvwsddgelvalvskdtvy 168
                     ++s+ki    +++ ++++++ y     f     ++L v++ g + ++D+++ +l++ri+ ++  + +     +g+++a +s d++ 
     EPX74181.1 414 ANGSLKIWNHKTGSCIRTFDCGYVLAAAFVnadKQILSVNKAGEIELFDVASSSLLERIQAHNgpIWDLAIGHNGSYFATASADKTL 500
                    48889998888888889999999999988888889*************************996569**************9988876 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 0.77
                    XXXXXXXXXXXX.............XXXXXXX..XXXXX CS
  Coatomer_WDAD 164 kdtvyilsynleaveeedeeegvedafevlhel.sesik 201
                     +++ + sy+ e    e +e+  ed+++++++   es k
     EPX74181.1 705 YESTLVSSYSAE----ERNEDATEDNVATVNKQtVESLK 739
                    445555556666....77888888888877775355555 PP

>> Nbas_N  Neuroblastoma-amplified sequence, N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       2.3   4.6e+03     224     258 ..      99     133 ..      57     143 .. 0.69
   2 ?    7.6   0.0    0.0011       2.1     206     258 ..     189     244 ..     172     251 .. 0.77
   3 ?   -2.0   0.0      0.86   1.7e+03     210     260 ..     457     508 ..     440     514 .. 0.74
   4 ?    0.7   0.0      0.14   2.7e+02     217     262 ..     520     566 ..     513     571 .. 0.79

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 2.3
      Nbas_N 224 rkaeekdgvfkmslspdgtllavihfsgklsiwdi 258
                   +  k  v  m +   gt+la       + +wd+
  EPX74181.1  99 TLNGHKSAVSTMVFDQTGTRLASGSKDTDIILWDV 133
                 44556677777888888888888777777777776 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0011
      Nbas_N 206 alakkrgllkllslkl...ysrkaeekdgvfkmslspdgtllavihfsgklsiwdi 258
                  ++ k ++lkl +l +      + + +  ++ ms+spdg +  +      + +w+i
  EPX74181.1 189 LSSGKDSFLKLWDLSIqhcVETHVNHQGEIWTMSVSPDGKRCLTASSDADVKVWEI 244
                 35578899999877652114567888999***********9999999999999998 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 0.86
      Nbas_N 210 krgllkllslklysrkaeekdgvfkmslspdgtllavihfsgklsiwdi.ps 260
                 +  l+ + s  l  r +  +  ++ +++  +g+ +a+      l +w++ ps
  EPX74181.1 457 EIELFDVASSSLLERIQAHNGPIWDLAIGHNGSYFATASADKTLKLWSLkPS 508
                 4567888888888888888888899999999999988888888888876355 PP

  == domain 4  score: 0.7 bits;  conditional E-value: 0.14
      Nbas_N 217 lslkl.ysrkaeekdgvfkmslspdgtllavihfsgklsiwdipslk 262
                  +l++  +r+ +  d v+  ++spdg l+++  +   + ++ + +lk
  EPX74181.1 520 FALRVeQTRQIDFADDVLATTISPDGRLITASLLDNTVKVYYLDTLK 566
                 55554236888889***************999888888888777776 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0     0.041        81      67     155 ..      48     141 ..      37     156 .. 0.72
   2 ?    0.7   0.0      0.13   2.7e+02     207     289 ..     406     488 ..     394     500 .. 0.74
   3 ?    4.2   0.0     0.012        23       3      62 ..     578     638 ..     576     698 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.041
   WD40_like  67 lsllenee...evenekieedistvkviddklliGtnkGsiyvfskdlqleevllgqsseIkeikienn..kiysLs.esafivfdlfsqnieyk 155
                 + +l+ ++   + + ++   ++s+ ++ +d  + G + Gsi ++++  +l  +l g++s +  +  ++   ++ s s ++  i +d+ ++  +y+
  EPX74181.1  48 EWDLKTGQlssKWKDTDCPFNVSCLTNHGDVYAAGYEDGSIRLWKEG-ELLLTLNGHKSAVSTMVFDQTgtRLASGSkDTDIILWDVVNETGLYR 141
                 5555555554455667777899**********************999.8999999****999998775311444444134566667766665555 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.13
   WD40_like 207 dy.livGgsfkyllliNiklnvntfklrlevegiskikkisefvvafsTlcgkvgigDiRdketfkllesgvGviydmkfennt 289
                 +y +++ g   +l++ N k+ +   ++++        ++  +  +      g + + D+ + + ++ ++++ G i+d+++ +n 
  EPX74181.1 406 NYeMVLSGANGSLKIWNHKTGSCIRTFDCGYVLAAAFVN-ADKQILSVNKAGEIELFDVASSSLLERIQAHNGPIWDLAIGHNG 488
                 442566677778888888877777777776666666665.455677777899999**********************9998875 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.012
   WD40_like   3 iYsidiskkgslilyGgkddkctvlkleslesvsivesfedSvifvkllddd.lilvvtlD 62 
                 + s+di ++++l++  + d+++++  l+ ++   ++   +dSv+ v +  +   +  ++ D
  EPX74181.1 578 VLSMDIAHDSKLLATCSADKNVKLWGLDFGDCHKSIFAHQDSVMKVAFQPGSrNFFTCSKD 638
                 7899**************************99999999******99887665466666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (921 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       551  (0.0307323); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.79u 0.29s 00:00:01.08 Elapsed: 00:00:00.45
# Mc/sec: 6111.88
//
Query:       EPX74182.1  [L=254]
Description: SUMO-targeted ubiquitin-protein ligase E3 Slx8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.2e-11   42.9   6.2    5.2e-11   42.2   6.2    1.3  1  zf-C3HC4_3     Zinc finger, C3HC4 type (RING finger)
    1.1e-09   38.0   7.9    2.3e-09   37.0   7.9    1.5  1  zf-C3HC4       Zinc finger, C3HC4 type (RING finger)
    1.9e-08   34.5   8.3    2.1e-08   34.3   6.8    1.8  2  zf-RING_2      Ring finger domain
    2.4e-08   33.7   8.5    3.9e-08   33.0   8.5    1.4  1  Prok-RING_4    Prokaryotic RING finger family 4
    5.8e-08   32.5   7.4    5.8e-08   32.5   7.4    1.7  2  zf-C3HC4_2     Zinc finger, C3HC4 type (RING finger)
    9.9e-08   31.8   7.0    1.8e-07   31.0   7.0    1.4  1  zf-RING_5      zinc-RING finger domain
    5.8e-05   23.0   3.7    5.8e-05   23.0   3.7    2.3  2  zf-RING_UBOX   RING-type zinc-finger
    0.00017   21.5   1.4    0.00028   20.9   1.4    1.3  1  zf-ANAPC11     Anaphase-promoting complex subunit 11 RING-H2 
    0.00067   19.9   3.2     0.0014   18.9   3.2    1.5  1  zf-rbx1        RING-H2 zinc finger domain
     0.0032   17.6   9.0      0.006   16.7   9.0    1.5  1  zf-C3HC4_4     zinc finger of C3HC4-type, RING
     0.0083   15.9   4.9      0.018   14.8   4.9    1.5  1  zf-RING_4      RING/Ubox like zinc-binding domain
  ------ inclusion threshold ------
      0.047   13.6   2.2       0.07   13.1   2.2    1.2  1  Baculo_IE-1    Baculovirus immediate-early protein (IE-0)
      0.088   12.7   4.7       0.16   11.9   4.7    1.4  1  zf-RING_6      zf-RING of BARD1-type protein
      0.091   12.6   0.3       0.24   11.2   0.1    1.7  2  Rad50_zn_hook  Rad50 zinc hook motif
        1.4    9.0   7.2        3.2    7.8   7.1    1.7  1  DZR            Double zinc ribbon
        1.5    8.7  11.1       0.71    9.7   5.7    2.7  3  zf-RING_11     RING-like zinc finger


Domain annotation for each model (and alignments):
>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.2   6.2   4.6e-14   5.2e-11       2      47 ..     188     235 ..     187     238 .. 0.93

  Alignments for each domain:
  == domain 1  score: 42.2 bits;  conditional E-value: 4.6e-14
                 GSB-TTTSSSBS-EEETTEEEEEE-HHHHHHHHH...TT-B-TTT--B- CS
  zf-C3HC4_3   2 deeCviClerprnvvllpCgHlvlCeeCaekllk...rkkkCpiCrrpi 47 
                 d +CviCl++p+n    pCgH+ +C+ C  + l     ++kCp+Crr++
  EPX74182.1 188 DYKCVICLDNPENLSATPCGHI-FCNFCILSALGtssATQKCPVCRRKV 235
                 579*******************.******99987889**********98 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.0   7.9     2e-12   2.3e-09       1      41 []     191     231 ..     191     231 .. 0.96

  Alignments for each domain:
  == domain 1  score: 37.0 bits;  conditional E-value: 2e-12
                 -TTT-S--SS-E.E-TTS--B-CHHHHHHHHC.TSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepnelleCkHsfCskCirkilks.rkkvkCPlC 41 
                 C iCl+++++ + +++C+H fC+ Ci++ l + + ++kCP+C
  EPX74182.1 191 CVICLDNPENLS-ATPCGHIFCNFCILSALGTsSATQKCPVC 231
                 9***********.*****************99888889**** PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.3   6.8   1.9e-11   2.1e-08       2      44 .]     190     232 ..     189     232 .. 0.91
   2 ?   -1.6   0.0       3.3   3.7e+03       3      10 ..     239     246 ..     237     251 .. 0.71

  Alignments for each domain:
  == domain 1  score: 34.3 bits;  conditional E-value: 1.9e-11
   zf-RING_2   2 eCpICleelssadsvlllpCgHvfhreClerwlrssst...CPlCr 44 
                 +C+ICl   ++++++ ++pCgH+f+  C+   l +ss    CP+Cr
  EPX74182.1 190 KCVICL---DNPENLSATPCGHIFCNFCILSALGTSSAtqkCPVCR 232
                 7****9...6778899999**********99999999999*****9 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 3.3
   zf-RING_2   3 CpICleel 10 
                  +ICle +
  EPX74182.1 239 NVICLEMM 246
                 57999766 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.0   8.5   3.5e-11   3.9e-08       1      44 [.     191     239 ..     191     241 .. 0.87

  Alignments for each domain:
  == domain 1  score: 33.0 bits;  conditional E-value: 3.5e-11
  Prok-RING_4   1 CvlCgeqekkailepCgHlvCkeCfdsk..dls...sCPlCqrrisksd 44 
                  Cv+C  ++++    pCgH++C+ C  s+   +s    CP+C+r++ +++
   EPX74182.1 191 CVICLDNPENLSATPCGHIFCNFCILSAlgTSSatqKCPVCRRKVHPKN 239
                  ************************9887653335679*******99887 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.5   7.4   5.2e-11   5.8e-08       1      40 []     190     231 ..     190     231 .. 0.90
   2 ?   -2.9   0.1       5.9   6.6e+03       4       9 ..     241     246 ..     240     248 .. 0.82

  Alignments for each domain:
  == domain 1  score: 32.5 bits;  conditional E-value: 5.2e-11
  zf-C3HC4_2   1 kCpiCldmlkdpsvvtpCgHvfCqkCilrsLeekn...eCPlC 40 
                 kC iCld  ++ +  tpCgH fC+ Cil +L  ++   +CP+C
  EPX74182.1 190 KCVICLDNPEN-LSATPCGHIFCNFCILSALGTSSatqKCPVC 231
                 7*********9.799****************87654569**** PP

  == domain 2  score: -2.9 bits;  conditional E-value: 5.9
  zf-C3HC4_2   4 iCldml 9  
                 iCl+m+
  EPX74182.1 241 ICLEMM 246
                 999986 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.0   7.0   1.6e-10   1.8e-07       1      44 []     190     233 ..     190     233 .. 0.95

  Alignments for each domain:
  == domain 1  score: 31.0 bits;  conditional E-value: 1.6e-10
   zf-RING_5   1 hCnkCfeklskeekfyltsCgHifCekClkkll...ekeavCpiCrk 44 
                 +C +C ++    e+   t+CgHifC+ C+  +l    + ++Cp+Cr+
  EPX74182.1 190 KCVICLDNP---ENLSATPCGHIFCNFCILSALgtsSATQKCPVCRR 233
                 699999999...*********************************95 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   3.7   5.2e-08   5.8e-05       1      39 []     191     229 ..     191     229 .. 0.77
   2 ?    2.0   0.6       0.2   2.2e+02       1      11 [.     228     237 ..     228     244 .. 0.71

  Alignments for each domain:
  == domain 1  score: 23.0 bits;  conditional E-value: 5.2e-08
  zf-RING_UBOX   1 CpIClelftdP..lv.lpCGHtFCreClwelskslegafkCP 39 
                   C ICl+    P  l  +pCGH+FC  C+      ++ + kCP
    EPX74182.1 191 CVICLDN---PenLSaTPCGHIFCNFCILSALGTSSATQKCP 229
                   999**84...44434468**********65788888888888 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.2
  zf-RING_UBOX   1 CpIClelftdP 11 
                   Cp+C+    +P
    EPX74182.1 228 CPVCRRKV-HP 237
                   ****9887.66 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   1.4   2.5e-07   0.00028      49      82 ..     203     236 ..     187     239 .. 0.81

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 2.5e-07
                 EBTTS-EEEHHHHHHHHHHHSTSSB-TTTSSB-- CS
  zf-ANAPC11  49 lGkckhnfhlhcilkwletetskglcpmcrqtfk 82 
                    c h+f + cil  l t+++ ++cp+cr++++
  EPX74182.1 203 ATPCGHIFCNFCILSALGTSSATQKCPVCRRKVH 236
                 456***************************9865 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   3.2   1.2e-06    0.0014      12      55 .]     189     232 ..     183     232 .. 0.87

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 1.2e-06
     zf-rbx1  12 eacieckapgdeecpvvlGeCgHaFHlhCiskWlkt...rkvCPlcr 55 
                  +c+ c  + ++   +    CgH F   Ci + l t    ++CP+cr
  EPX74182.1 189 YKCVICLDNPEN---LSATPCGHIFCNFCILSALGTssaTQKCPVCR 232
                 678889888888...66679**************99999999****8 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   9.0   5.4e-06     0.006       1      42 []     191     231 ..     191     231 .. 0.93

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 5.4e-06
  zf-C3HC4_4   1 CPiCldYLekPvsleCGhsfClsCisslqkepdgeqllCplC 42 
                 C iCld  e+    +CGh+fC  Ci s    ++++   Cp+C
  EPX74182.1 191 CVICLDNPENLSATPCGHIFCNFCILSALGTSSAT-QKCPVC 231
                 89999999999999**************9999887.9***** PP

>> zf-RING_4  RING/Ubox like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   4.9   1.6e-05     0.018      13      46 ..     199     234 ..     190     235 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.6e-05
   zf-RING_4  13 kdlkpCeCgyqiClfCyhrile..eeegrCPaCree 46 
                 ++l   +Cg+ +C fC   +l   +++++CP Cr++
  EPX74182.1 199 ENLSATPCGHIFCNFCILSALGtsSATQKCPVCRRK 234
                 4666779*********999998445799******85 PP

>> Baculo_IE-1  Baculovirus immediate-early protein (IE-0)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   2.2   6.3e-05      0.07      75     130 ..     183     234 ..     150     242 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 6.3e-05
  Baculo_IE-1  75 flekklyqcnicedtsaeerflkPneccGykicnlcyanlwkfstvyPvcPvckts 130
                   +    y+c ic d   +       + cG+  cn c       s+    cPvc+  
   EPX74182.1 183 SQRLADYKCVICLDNPENL----SATPCGHIFCNFCILSALGTSSATQKCPVCRRK 234
                  5555669*****9976553....35679*************************865 PP

>> zf-RING_6  zf-RING of BARD1-type protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   4.7   0.00014      0.16      10      47 ..     191     232 ..     183     243 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00014
   zf-RING_6  10 csrctdilrepvclggcehifcsncisdcfgsg.....cpvcy 47 
                 c  c d   e +    c hifc  ci   +g+      cpvc 
  EPX74182.1 191 CVICLDN-PENLSATPCGHIFCNFCILSALGTSsatqkCPVCR 232
                 4444442.34455568**********99999643444499996 PP

>> Rad50_zn_hook  Rad50 zinc hook motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       7.5   8.4e+03      31      41 ..     103     113 ..     102     114 .. 0.73
   2 ?   11.2   0.1   0.00022      0.24      15      28 ..     221     234 ..     217     240 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 7.5
                    HHHHHHHHHHH CS
  Rad50_zn_hook  31 eehrseLikel 41 
                    e +r+eL+ +l
     EPX74182.1 103 EGRRNELLADL 113
                    45699999887 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00022
                    HTT-SEE-TTT--E CS
  Rad50_zn_hook  15 lkeakgcCPlCgRe 28 
                    +++a+++CP+C R+
     EPX74182.1 221 TSSATQKCPVCRRK 234
                    578999*******8 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   7.1    0.0029       3.2       8      45 ..     204     242 ..     191     244 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0029
         DZR   8 lppdarfCseCgtk.lkavaaedrCpsCgekvdpearfC 45 
                 +p + +fC+ C  + l   +a ++Cp C +kv+p+  +C
  EPX74182.1 204 TPCGHIFCNFCILSaLGTSSATQKCPVCRRKVHPKNVIC 242
                 667889*****8775766677**************9999 PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   5.7   0.00063      0.71       2      28 ..     191     214 ..     190     215 .. 0.84
   2 ?   -0.1   0.2      0.74   8.3e+02       2      15 ..     228     241 ..     228     244 .. 0.67
   3 ?    0.1   0.1      0.63     7e+02       4       9 ..     241     246 ..     240     251 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00063
  zf-RING_11   2 CsICLeefkpgqalfilpCsHtFHfkC 28 
                 C+ICL++ ++   l  +pC+H+F   C
  EPX74182.1 191 CVICLDNPEN---LSATPCGHIFCNFC 214
                 ******9866...9999******6555 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.74
  zf-RING_11   2 CsICLeefkpgqal 15 
                 C +C  ++ p++ +
  EPX74182.1 228 CPVCRRKVHPKNVI 241
                 77887777777665 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.63
  zf-RING_11   4 ICLeef 9  
                 ICLe +
  EPX74182.1 241 ICLEMM 246
                 ***987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1133  (0.0631937); expected 358.6 (0.02)
Passed bias filter:                      606  (0.0338); expected 358.6 (0.02)
Passed Vit filter:                        74  (0.00412739); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.49u 0.22s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 1880.82
//
Query:       EPX74183.1  [L=519]
Description: AP-endonuclease Apn2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.3e-17   62.4   0.0    6.3e-17   61.9   0.0    1.2  1  Exo_endo_phos    Endonuclease/Exonuclease/phosphatase family
    3.4e-05   23.6   0.1    0.00062   19.6   0.0    2.6  2  Exo_endo_phos_2  Endonuclease-reverse transcriptase
     0.0013   18.8   9.0     0.0014   18.6   3.6    3.1  2  zf-GRF           GRF zinc finger
  ------ inclusion threshold ------
       0.08   12.6   4.0       0.12   12.0   4.0    1.2  1  P33MONOX         P33 mono-oxygenase


Domain annotation for each model (and alignments):
>> Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.9   0.0   1.4e-20   6.3e-17       1     233 []       4     295 ..       4     295 .. 0.81

  Alignments for each domain:
  == domain 1  score: 61.9 bits;  conditional E-value: 1.4e-20
                    EEEEESTG......CHHHHTHHHHHHHHHHHHHHCTTSEEEEEEEBSCTCHHHHHHHHHTTCEEEEECCHECSSSTTSSEEEEEECSTEEEEEEEE CS
                    xxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos   1 ltwNvngq......aspalgssrrsdrladlltaydaDvlgLQEvdddelsriplllalggflgasstsptgggggggnggavlsrfpltslfrrt 90 
                    l+wNvng       +    ++ ++ + + ++l   +aD++++QE++++  +++ + ++  g+ g+++     ++++g+ g++++++  l + +   
     EPX74183.1   4 LSWNVNGIqnpfnyH--PWNKKNSYKEVFEEL---KADIICFQELKMQKDNFPQEFALIEGYEGYFTF---PNTRKGYSGVGIYVKKDLCTPIKAE 91 
                    79********99652..445555566666666...669************999999999666666666...489***************8888888 PP

                    EEETSSSSGCEEEEEEEEEEEEEEE......................................CCCHHGHHHHHHHHHHHHHHHHHHHHHTTSEEE CS
                    xxxxxxxxxxxxxxxxxxxxxxxxx......................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos  91 fiefndlvaalrreplaakleqlni......................................ashrdhdlvrdlqllalllqvealnadrgapvi 148
                       +++l ++  r   ++  +  +i                                      +s+    ++r++    l +++  l ++ ++ v+
     EPX74183.1  92 EGITGILPVRNQRYSYIEAPPHEQIgyypkdvdrktakwvddegrciildlgifiligvycpvNSGDHRWEYRKAFYKCLRDRISSLIKEGKRNVV 187
                    88888888888888888888888889999999999***************************5555555555555555555566666677777888 PP

                    EEEE-SSSTSGGGBSCGHHHHHHCTTTH........H......................SSCESCETTTTTTTTTTTEB-BEEEEEECHHHCCEEE CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxx........x......................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos 149 vaGDfNarpsdddsrvlrtrglalapap........v......................glyllgggptptyvtraggsrlDrilaspalalfrsg 214
                    ++GD N  +++ d+ +  +  ++ +                                   +  ++++++ + ++ ++g r+D++la+p+l ++++ 
     EPX74183.1 188 LVGDVNILCDSIDTADQKDIIKESFVPSisesrkwlRellkphrsgllldigrirhptrKGMFTCWNTRLNMRPTNYGTRIDYTLATPDLLPWVQD 283
                    8***********99998887777776656666665505556666667778889999**************************************99 PP

                    EEEECCHHEECTSSCSSSB CS
                    xxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos 215 vlppplalvrrealtlSDH 233
                      +  ++       ++SDH
     EPX74183.1 284 ADIMAHV-------MGSDH 295
                    9999995.......69999 PP

>> Exo_endo_phos_2  Endonuclease-reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   1.4e-07   0.00062       3     119 .]     147     299 ..     145     299 .. 0.83
   2 ?   -2.3   0.0      0.86   3.8e+03       4      29 ..     329     353 ..     327     367 .. 0.73

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 1.4e-07
  Exo_endo_phos_2   3 iisvYippsd..........elenlestlekllselkspkiiilGDfNakhplWgsedtds..........sargeeLiefleehslsll.... 72 
                      +i vY+p ++            ++l + +++l++e k+ +++++GD+N    + ++ d+++          s+  + L e+l+ h   ll    
       EPX74183.1 147 LIGVYCPVNSgdhrweyrkaFYKCLRDRISSLIKEGKR-NVVLVGDVNILCDSIDTADQKDiikesfvpsiSESRKWLRELLKPHRSGLLldig 239
                      6789999999999999998888999**********997.9**************9977777999999999989999999999999988888999 PP

  Exo_endo_phos_2  73 ...........nllksgptfkssngsstiDltltsdnlals..kleleeedlgSDHrpil 119
                                  + ++ ++++++n+ + iD tl++++l+      ++  + +gSDH p++
       EPX74183.1 240 rirhptrkgmfTCWNTRLNMRPTNYGTRIDYTLATPDLLPWvqDADIMAHVMGSDHCPVY 299
                      99755544444444444555666669*************998777788899******986 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.86
  Exo_endo_phos_2   4 isvYippsdelenlestlekllselk 29 
                      +s+Y+p ++ ++ + +++ek+ ++ +
       EPX74183.1 329 HSAYRPSKN-IHAMFQQFEKTKKSRS 353
                      688988888.7777777777665554 PP

>> zf-GRF  GRF zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.2      0.25   1.1e+03      23      28 ..     165     170 ..     160     174 .. 0.86
   2 !   18.6   3.6   3.2e-07    0.0014       1      32 [.     456     488 ..     456     516 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.25
      zf-GRF  23 RkFYkC 28 
                 ++FYkC
  EPX74183.1 165 KAFYKC 170
                 79**** PP

  == domain 2  score: 18.6 bits;  conditional E-value: 3.2e-07
      zf-GRF   1 plCk.cgrlavlltvrktgpNkGRkFYkCpkgk 32 
                 plC  + ++++ll v+k g N GRkF+ C+ + 
  EPX74183.1 456 PLCDgHKEPCKLLSVKKPGINYGRKFWMCARPI 488
                 69*9888**********************9764 PP

>> P33MONOX  P33 mono-oxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   4.0   2.7e-05      0.12     107     191 ..     325     411 ..     320     427 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.7e-05
    P33MONOX 107 agltdagytPhkGltaeetkyhrvaea..lqkLklqsgdakeerltssaqstPsstPsssPkqkrrgwfsqgssasltsselssvdm 191
                 a ++ ++y P k + a   ++ +  ++   + +++  + ++     s ++stP s P+  P +krr   +q   +s  s +++s++ 
  EPX74183.1 325 AACHHSAYRPSKNIHAMFQQFEKTKKSrsESDINMAETSTTSSCSPSTNNSTPLSVPENGPVEKRRRTEQQPKLSSFFSKKSHSMEK 411
                 6788999*************9988887335689999999999999999*************88888776666666665666655553 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (519 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       801  (0.0446762); expected 358.6 (0.02)
Passed bias filter:                      562  (0.0313459); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.30s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 3600.12
//
Query:       EPX74184.1  [L=216]
Description: DNA polymerase epsilon subunit Dpb4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      8e-11   42.1   0.1    1.5e-10   41.2   0.1    1.5  1  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a
     0.0027   18.0   0.2     0.0027   18.0   0.2    2.0  2  Histone        Core histone H2A/H2B/H3/H4
  ------ inclusion threshold ------
      0.021   14.8   0.0      0.041   13.8   0.0    1.6  1  PUA            PUA domain


Domain annotation for each model (and alignments):
>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.2   0.1   2.5e-14   1.5e-10       3      65 .]      17      80 ..      15      80 .. 0.97

  Alignments for each domain:
  == domain 1  score: 41.2 bits;  conditional E-value: 2.5e-14
                   XXHHHHHHHHHCC.TTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHHH CS
  CBFD_NFYB_HMF  3 LPiarvkkImksd.pdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehiklAv 65
                   LP + v +++k+  p+  +  k+A + i++++++f+++l+s+A ei + ++rK+++++++++A+
     EPX74184.1 17 LPRSIVMRLIKQVlPQKSTAQKEAVKAITNSATLFASYLTSAAGEISSTRNRKIVMPQDVLSAL 80
                   999**********************************************************997 PP

>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.2   4.6e-07    0.0027      59     128 ..      14      80 ..       8      82 .. 0.91
   2 ?    0.3   0.6      0.14   8.2e+02      32      51 ..     115     134 ..      93     153 .. 0.48

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 4.6e-07
                 SXXSXHHHHHHHHHHHH.TTSSSXEEXHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTXSEEXHHHHHHHH CS
     Histone  59 dlliqklpfaRvvreivksekedlrisaeavlalqealEallvelfeeAnllakhaKRvTitpkDiqlAr 128
                 dl  ++  + R+++++ +   ++   ++eav a++  +  +   l++ A+ ++  ++R+ ++p+D+ +A+
  EPX74184.1  14 DLALPRSIVMRLIKQVLP---QKSTAQKEAVKAITNSATLFASYLTSAAGEISSTRNRKIVMPQDVLSAL 80 
                 666778889999999999...99999****************************************9997 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.14
                 SSSB--TTT-XTTHHHHHHH CS
     Histone  32 kskkkkkrryrpgtvalkei 51 
                 + k++kk r+ p+++ ++e 
  EPX74184.1 115 EDKSTKKSRMEPQEKLEQET 134
                 22233333333333333332 PP

>> PUA  PUA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   6.9e-06     0.041       6      32 ..      37      63 ..      33      83 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 6.9e-06
                -HHHHHHHHTT-EEEGGGEEEEETT-- CS
         PUA  6 ddgAvkallsgasLlapGvvevegdfe 32
                 ++Avka+++ a L+a +++++ g+++
  EPX74184.1 37 QKEAVKAITNSATLFASYLTSAAGEIS 63
                589**********************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1212  (0.0676); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1524.88
//
Query:       EPX74185.1  [L=140]
Description: mRNA decapping complex subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-15   57.1   1.0    1.7e-15   56.5   1.0    1.2  1  LSM       LSM domain
  ------ inclusion threshold ------
      0.013   15.2   0.1      0.021   14.4   0.1    1.3  1  Hfq       Hfq protein


Domain annotation for each model (and alignments):
>> LSM  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.5   1.0   1.8e-19   1.7e-15       3      66 ..      16      81 ..      15      82 .. 0.95

  Alignments for each domain:
  == domain 1  score: 56.5 bits;  conditional E-value: 1.8e-19
                HHHTTTSEEEEEETTSEEEEEEEEEEETTSEEEEEEEEEEETTET..EEEEEEEEEEEGGGEEEEE CS
         LSM  3 lkklinkkvtvelkngrelrGtLkgfDqfmNlvLedveetlkdkk..ekrklglvliRGnnivlis 66
                l +++++kv+v l++g++l+G+L++fDqf Nl+L+ ++e++   +   + + g +++RG+n+vl++
  EPX74185.1 16 LVDYVDRKVIVVLRDGKKLIGILRSFDQFANLMLQYTIERIYVDDmyGDIDRGVYIVRGENVVLLG 81
                6789***************************************9999999*************986 PP

>> Hfq  Hfq protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.1   2.4e-06     0.021      15      39 ..      23      47 ..      19      57 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 2.4e-06
                EEEEEETTS-EEEEEEEEE-SSEEE CS
         Hfq 15 pvtifLvnGiklkGviksfDnftvl 39
                +v++ L  G kl G+++sfD+f  l
  EPX74185.1 23 KVIVVLRDGKKLIGILRSFDQFANL 47
                79********************755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       475  (0.0264934); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.27s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 999.44
//
Query:       EPX74186.1  [L=456]
Description: pig-A [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.6e-44  148.1   3.1    9.8e-44  147.9   1.3    2.1  2  PIGA             PIGA (GPI anchor biosynthesis)
    1.4e-30  106.1   0.0    2.1e-30  105.5   0.0    1.2  1  Glycos_transf_1  Glycosyl transferases group 1
    1.9e-27   96.4   0.2    2.7e-27   95.8   0.2    1.3  1  Glyco_transf_4   Glycosyltransferase Family 4
    5.2e-25   88.4   0.0    1.1e-24   87.3   0.0    1.6  1  Glyco_trans_1_4  Glycosyl transferases group 1
    3.3e-09   37.4   0.0    5.4e-09   36.7   0.0    1.4  1  Glyco_trans_4_4  Glycosyl transferase 4-like domain
     0.0018   18.3   0.4      0.052   13.6   0.1    2.3  2  Glyco_trans_4_2  Glycosyl transferase 4-like
  ------ inclusion threshold ------
      0.012   16.0   0.0      0.042   14.2   0.0    1.9  2  Glyco_trans_1_2  Glycosyl transferases group 1


Domain annotation for each model (and alignments):
>> PIGA  PIGA (GPI anchor biosynthesis)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.9   1.3   3.8e-47   9.8e-44       1      90 []      42     131 ..      42     131 .. 0.99
   2 ?   -2.1   0.0       2.4     6e+03      42      80 ..     266     301 ..     246     303 .. 0.71

  Alignments for each domain:
  == domain 1  score: 147.9 bits;  conditional E-value: 3.8e-47
        PIGA   1 hayedrkGvryltnglkvYyvPllvlyrevtlptvlstlpllrnillrekidivhghqalstlaheailhaktlGlktvftDhsLfgfad 90 
                 hay+dr+Gvryltngl  YyvPl+++yre+t+p+++ ++p++rni++re+i+i+hgh++ls l+h+ailh++t+Glkt+ftDhsLfgfad
  EPX74186.1  42 HAYKDRVGVRYLTNGLTAYYVPLHTVYRETTFPSFFYFFPIFRNIIIREQIEIIHGHGSLSFLCHDAILHGRTMGLKTCFTDHSLFGFAD 131
                 9***************************************************************************************98 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 2.4
        PIGA  42 lrnillrekidivhghqalstlaheailhaktlGlktvf 80 
                 +r +++r +i     h +l+     +++ a + Gl ++ 
  EPX74186.1 266 VRDVMVRGHIY---LHPSLTEAFGTVLVEAASCGLYVIS 301
                 56677776664...3677777777777778888877765 PP

>> Glycos_transf_1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.5   0.0   8.2e-34   2.1e-30       8     168 ..     189     350 ..     183     354 .. 0.93

  Alignments for each domain:
  == domain 1  score: 105.5 bits;  conditional E-value: 8.2e-34
                      HTTTTTT-EEEEEESS-TTTTTHHHHHHHHHCCCCCHCSCEEEEEES.STTHHHHHHHHHHHCTTCGGGEEECCHSSSHHHHHHCESEEEEEES CS
  Glycos_transf_1   8 klgknekkkiilsvgrlekeKgvdllikafallkkqlnpnvklviaGngeeekelkklaeelelsdnviflgevsredleellknadifvlpsi 101
                       +++ ++  +i++++rl ++Kg+dlli  +++++++   +v++viaG+g++   l+++ e++ l+d+v++lg v ++++  ++ + +i+++ps 
       EPX74186.1 189 PSKASKEYLTIVVISRLYYNKGIDLLIAIIPKICAE-FRKVRFVIAGDGPKAIDLEQMREKYMLQDRVEMLGSVRHDQVRDVMVRGHIYLHPSL 281
                      55666788899***********************97.********************************************************* PP

                      SBSS-HHHHHHHHTT--EEEETTTTHCHHCHTTTSEEEE-TT..-HHHHHHHHHHHHHSHHHHHHHHHH CS
  Glycos_transf_1 102 sEgfGivllEAmaaglpviasnaggpaevvkdgetGllvkpn..naealaeairklledeelrerlgen 168
                      +E+fG+vl+EA ++gl vi++++gg++ev+ ++ t +  +++   a +l++ai ++l+++ + +++  +
       EPX74186.1 282 TEAFGTVLVEAASCGLYVISTKVGGVPEVLPSHMTRFARPEEddLARTLSNAISDYLNNKIQTVNFHDE 350
                      *****************************************9877899999999999999888888765 PP

>> Glyco_transf_4  Glycosyltransferase Family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.8   0.2   1.1e-30   2.7e-27       1     166 [.      16     180 ..      16     184 .. 0.84

  Alignments for each domain:
  == domain 1  score: 95.8 bits;  conditional E-value: 1.1e-30
  Glyco_transf_4   1 vGGverhvleLaraLarrGheVtvvtpgddgpleeev......elvvrvprvplpllkrllrslaflrrlrrllkrekpDvvHahspaalgaall 89 
                     +GG+e h+++L+++L ++Gh+V v+t++++++ + +          + vp         ++  + f++ +r+++ re++ ++H h++ ++++ + 
      EPX74186.1  16 PGGIESHIFQLSQRLIDLGHKVIVITHAYKDRVGVRYltngltA--YYVPLHTVYRETTFPSFFYFFPIFRNIIIREQIEIIHGHGSLSFLC-HD 107
                     59*********************************966444221..222222222344566678888999****************999865.34 PP

  Glyco_transf_4  90 alrr..rlgiplVltvHglyekrllkarlkplsrllralerrllrradrviavSeatadelrerygvppekitVipnGv 166
                     a+++    g+++ +t H+l+      ++   +s++ ++l++++++  d+vi+vS++++++ + r  ++p+k+ Vipn+ 
      EPX74186.1 108 AILHgrTMGLKTCFTDHSLF------GFADAGSIITNKLLKFTMSDIDHVICVSHTCRENTVLRAVLNPQKVSVIPNAL 180
                     4444567*************......99*************************************************86 PP

>> Glyco_trans_1_4  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.3   0.0   4.4e-28   1.1e-24       3     134 .]     198     336 ..     196     340 .. 0.84

  Alignments for each domain:
  == domain 1  score: 87.3 bits;  conditional E-value: 4.4e-28
                      EEEEES---GG.GTHHHHHHHHHHHH.H.H.EEEEEES---..HHHHHHHT..T-T.TEEEE---..THHHHHHHH-SEEEE--..---SHHHH CS
  Glyco_trans_1_4   3 vilfvGrleenvkgvdllleavpllrkk.d.vrlvivGdgprpeeleelaa..gleerveftGfv..edlaellaaadvfvaPs..egfglkll 88 
                      +i+ ++rl+ n kg+dll+  +p++ ++ + vr+vi+Gdgp++ +le++ +   l++rve++G v  +++++++ + ++++ Ps  e fg +l+
       EPX74186.1 198 TIVVISRLYYN-KGIDLLIAIIPKICAEfRkVRFVIAGDGPKAIDLEQMREkyMLQDRVEMLGSVrhDQVRDVMVRGHIYLHPSltEAFGTVLV 290
                      7999****878.**************88846*********9666777655457799*********9666****************99******* PP

                      HHHHTT-EEEE-TGGGTTT--..TTSSEE--TT-HHHHHHHHHHHHH- CS
  Glyco_trans_1_4  89 EamaaglpvVatdvggiaevv..gengllvppgdpealaeailrLled 134
                      Ea+++gl v++t+vgg++ev+    + +  p  ++++la+ + + ++d
       EPX74186.1 291 EAASCGLYVISTKVGGVPEVLpsHMTRFARP--EEDDLARTLSNAISD 336
                      *******************999667777777..455666655555443 PP

>> Glyco_trans_4_4  Glycosyl transferase 4-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.7   0.0   2.1e-12   5.4e-09       1     159 [.      17     178 ..      17     179 .. 0.81

  Alignments for each domain:
  == domain 1  score: 36.7 bits;  conditional E-value: 2.1e-12
  Glyco_trans_4_4   1 gGigryvaelaraLaarGheVtvltpapapg.apeleedgvrvhrlp...vprrpspladlaalralrrllrqrrerpdvvhahsptaglaarl 90 
                      gGi+ ++ +l+++L ++Gh V v+t a+  +   ++  +g++ + +p   v+r+   +    + + +r ++   re++ ++h h++++ l   +
       EPX74186.1  17 GGIESHIFQLSQRLIDLGHKVIVITHAYKDRvGVRYLTNGLTAYYVPlhtVYRETTFPSFFYFFPIFRNII--IREQIEIIHGHGSLSFLCHDA 108
                      8************************8765552335778899999999664445555555567889*****9..9************99998865 PP

  Glyco_trans_4_4  91 ar..rrrgiplvvtlhglllrrgsgavrrly.ralerrllrradavlvvseaeaeelra.lgvpadrvvvvpn 159
                      +   r+ g++  +t h+l    g + +++++   l +++++  d+v++vs+  +e  +    + +++v v+pn
       EPX74186.1 109 ILhgRTMGLKTCFTDHSLF---GFADAGSIItNKLLKFTMSDIDHVICVSHTCRENTVLrAVLNPQKVSVIPN 178
                      5422366999999999964...44556677769999******************87775277999*******9 PP

>> Glyco_trans_4_2  Glycosyl transferase 4-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.1     2e-05     0.052      11     138 ..      21     154 ..       5     155 .. 0.78
   2 ?    2.6   0.0      0.05   1.3e+02      52     106 ..     188     234 ..     164     255 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 2e-05
  Glyco_trans_4_2  11 vhtlrlakeLakrgyeVhvitp.kkga..kdeleaegihvhrlkvd...rkgpleylk.afkl.kklikkikPDvvhahyakpygll.gslaar 95 
                       h  +l + L + g++V vit   k++   ++l  +g++ + +++    r+ ++  +   f + +++i ++++ ++h h   +   + + l  r
       EPX74186.1  21 SHIFQLSQRLIDLGHKVIVITHaYKDRvgVRYL-TNGLTAYYVPLHtvyRETTFPSFFyFFPIfRNIIIREQIEIIHGHGSLSFLCHdAILHGR 113
                      5889999**************985666455555.7899999998885545557777753676669***************98885550555555 PP

  Glyco_trans_4_2  96 lsgvipvvlsvwGldvlkfpkksk.lkklllklalkkatkvist 138
                        g  ++ ++ +  + + f++++  +  +llk++++ ++ vi+ 
       EPX74186.1 114 TMG-LKTCFTDH--SLFGFADAGSiITNKLLKFTMSDIDHVICV 154
                      555.89999999..457777777658888********9999986 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.05
  Glyco_trans_4_2  52 vdrkgpleylkafklkklikkikPDvvhahyakpygllgslaarlsgvipvvlsv 106
                      +++k + eyl++  + +l+   ++D+++a+ +k       ++a + + +++v+  
       EPX74186.1 188 DPSKASKEYLTIVVISRLYYNKGIDLLIAIIPK-------ICAEFRK-VRFVIAG 234
                      468999*********************887655.......3334444.6666655 PP

>> Glyco_trans_1_2  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       2.1   5.4e+03      21      48 ..     105     131 ..     102     137 .. 0.79
   2 ?   14.2   0.0   1.6e-05     0.042       1      60 [.     275     334 ..     275     365 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 2.1
  Glyco_trans_1_2  21 cGafaltddaegleelftpgkevilfed 48 
                      c   +l  ++ gl  +ft+  +++ f+d
       EPX74186.1 105 CHDAILHGRTMGLKTCFTDH-SLFGFAD 131
                      77788999999******876.8887776 PP

  == domain 2  score: 14.2 bits;  conditional E-value: 1.6e-05
  Glyco_trans_1_2   1 ivLnpsrsespnlrlfEaaacGafaltddaegleelftpgkevilfe.dleelaekiryll 60 
                      i+L+ps  e + ++l+Eaa cG  +++++  g++e +       +++ ++++la+ +  ++
       EPX74186.1 275 IYLHPSLTEAFGTVLVEAASCGLYVISTKVGGVPEVLPSH-MTRFARpEEDDLARTLSNAI 334
                      789**************************9*****99665.44444468888888877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (456 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       445  (0.0248201); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.46
# Mc/sec: 3008.05
//
Query:       EPX74187.1  [L=342]
Description: ribose-phosphate pyrophosphokinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.7e-39  135.1   1.6      3e-34  118.7   1.4    2.2  2  Pribosyl_synth  Phosphoribosyl synthetase-associated domain
    5.3e-33  113.4   0.0    2.2e-32  111.4   0.0    1.9  2  Pribosyltran_N  N-terminal domain of ribose phosphate pyropho
    6.5e-13   48.5   0.1      1e-12   47.9   0.1    1.3  1  Pribosyltran    Phosphoribosyl transferase domain
  ------ inclusion threshold ------
      0.017   14.5   0.1       0.03   13.8   0.1    1.3  1  UPRTase         Uracil phosphoribosyltransferase


Domain annotation for each model (and alignments):
>> Pribosyl_synth  Phosphoribosyl synthetase-associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   4.1e-06     0.018       1      39 [.     186     224 ..     186     229 .. 0.93
   2 !  118.7   1.4   6.7e-38     3e-34      75     183 ..     229     335 ..     222     336 .. 0.96

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 4.1e-06
                     TGGGEEEEESSGGGHHHHHHHHHHTT-EEEEE------- CS
  Pribosyl_synth   1 dyrnavivakspgsakkatsyaerlrlglavihGeqkea 39 
                     dy+n v ++ + g ak+at+ a+ l l  a+ih +++++
      EPX74187.1 186 DYQNGVCISPDAGGAKRATAIADSLGLDFALIHKNRRHE 224
                     8********************************988766 PP

  == domain 2  score: 118.7 bits;  conditional E-value: 6.7e-38
                     --EES--TTSEEEEEEEEE-S-HHHHHHHHHHHHTT--EEEEEEEEE---TTHHHHHHHSS--EEEEESSS--HHHHHT-TTEEEE--HHHHHHH CS
  Pribosyl_synth  75 ltvvGdvgGriaiivddliddvesfvaaaevlkerGaykiyvlathGllssdaprlleesaidevvvtntipheiqklrcskiktvdislllaea 169
                     l +vGdv+ +iai++ddlid ++++v+aae +k++Ga ++y+l+th +ls da +++++s+id+++vtnt p+ i+  +c     +d+s  +aea
      EPX74187.1 229 LMLVGDVQDKIAILIDDLIDTASTLVSAAEFVKKHGASQVYALVTHCVLSGDAIERVKQSCIDKLIVTNTAPQTIEPSNCFD--VIDVSPTFAEA 321
                     789************************************************************************9999965..69********* PP

                     HHHHHHT---TT-S CS
  Pribosyl_synth 170 irrihngesmsylf 183
                     irrihnges+s l+
      EPX74187.1 322 IRRIHNGESISILY 335
                     ***********997 PP

>> Pribosyltran_N  N-terminal domain of ribose phosphate pyrophosphokinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.4   0.0   4.9e-36   2.2e-32       1      96 [.       4      99 ..       4     115 .. 0.95
   2 ?   -0.9   0.0      0.34   1.5e+03      16      59 ..     206     249 ..     200     321 .. 0.59

  Alignments for each domain:
  == domain 1  score: 111.4 bits;  conditional E-value: 4.9e-36
  Pribosyltran_N  1 lkifagssskeLaekiakrlgvelgkakvsrfadgEikveieesvrgkdvfiiqslskpvndnlmelllmidalrrasakritaViPylgysrqdr 96
                    l++f + s++ L e+i+++l + +g+a++++f++gE++v++++svrg+dv+ii + s +vnd+lmell+mi+a+++asa ++taV+P ++ysrq  
      EPX74187.1  4 LVVFGTDSHPRLTEAICEHLCLDVGRAEIGKFSNGETSVKVKQSVRGCDVYIISPASGQVNDHLMELLVMISACKTASAIKVTAVLPVFPYSRQPD 99
                    57999*****************************************************************************************65 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.34
  Pribosyltran_N  16 iakrlgvelgkakvsrfadgEikveieesvrgkdvfiiqslskp 59 
                     ia+ lg+  + ++ +r  +  +++ +  +v++k  ++i +l + 
      EPX74187.1 206 IADSLGLDFALIHKNRRHESGTSLMLVGDVQDKIAILIDDLIDT 249
                     55555555555555555555555555555555555555554422 PP

>> Pribosyltran  Phosphoribosyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.9   0.1   2.3e-16     1e-12      28     124 ..     187     274 ..     174     305 .. 0.85

  Alignments for each domain:
  == domain 1  score: 47.9 bits;  conditional E-value: 2.3e-16
                   GGGEEEEEEETTTHHHHHHHHHHSTT-EE-EEEEEE-TTT--EE........EE----TTSEEEEE-SEESSSHHHHHHHHHHHCC-BSEEEEEEEE CS
  Pribosyltran  28 gkpdvvvgiargGvpfakiladeLevplayvrkvkyrpdgseeaargssdesrlledpagkkVliVDDildtGgTllaalelLkekgpeevriavlv 124
                   +++ v + ++ gG  +a+++ad L++ +a + k +++++g++ +         l +d+ +k+ +++DD++dt++Tl  a+e++k++g+ +v + v +
    EPX74187.1 187 YQNGVCISPDAGGAKRATAIADSLGLDFALIHKNRRHESGTSLM---------LVGDVQDKIAILIDDLIDTASTLVSAAEFVKKHGASQVYALVTH 274
                   56678899************************************.........89**********************************98877766 PP

>> UPRTase  Uracil phosphoribosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.1   6.7e-06      0.03     115     180 ..     231     296 ..     213     307 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 6.7e-06
     UPRTase 115 LPkkiaertvlllDpviaTGgsaaaaiqlLkergvgeekIlvlsvlaseegvkrlaeefpkvkvvt 180
                 L  +++++ ++l+D +i T +++++a + +k++g+ +   lv   + s  +++r+ ++  +  +vt
  EPX74187.1 231 LVGDVQDKIAILIDDLIDTASTLVSAAEFVKKHGASQVYALVTHCVLSGDAIERVKQSCIDKLIVT 296
                 556778999**************************9999999999999999999998877655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       324  (0.0180713); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.29s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2389.31
//
Query:       EPX74188.1  [L=218]
Description: phosphatidate cytidylyltransferase Ptp4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-05   25.3   2.5    1.6e-05   24.8   2.5    1.3  1  CTP_transf_1  Cytidylyltransferase family


Domain annotation for each model (and alignments):
>> CTP_transf_1  Cytidylyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   2.5   8.9e-10   1.6e-05     109     198 ..      88     167 ..       7     195 .. 0.59

  Alignments for each domain:
  == domain 1  score: 24.8 bits;  conditional E-value: 8.9e-10
                   HHHHHHHHTHHHH.TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH---B-S-TTS---BHHHHHHHHHHHHHHHHHHHHHHHCTS CS
  CTP_transf_1 109 lallallyvvlllqslllienikeglllvllllalvvaaDigaYffGklfGktkllpkiSPkKTveGfigGlvaavvvglllalvlskal 198
                    ++++l++ +++l       n     + +++ ++l   +D++a  fG+ +Gk    pki  +K++ G+ig++v+ v+++++++ +  +  
    EPX74188.1  88 GVIFYLVGTLIVL-------NFLPEEI-AVMSILLLSWCDTAASSFGRKYGKY--TPKIAKNKSLAGSIGAFVCGVLASFVYWGIIRRGP 167
                   3344444444444.......2222223.34445555678************99..************************99987776543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       411  (0.0229238); expected 358.6 (0.02)
Passed bias filter:                      288  (0.0160634); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1551.85
//
Query:       EPX74189.1  [L=681]
Description: mitotic spindle checkpoint protein Mad1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   4.3e-171  570.6  76.6     5e-171  570.4  76.6    1.0  1  MAD            Mitotic checkpoint protein
     0.0011   18.2  10.4     0.0011   18.2  10.4    4.7  4  Atg14          Vacuolar sorting 38 and autophagy-related subu
  ------ inclusion threshold ------
       0.45   10.6  13.0        7.2    6.7   0.1    5.0  5  DUF1192        Protein of unknown function (DUF1192)


Domain annotation for each model (and alignments):
>> MAD  Mitotic checkpoint protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  570.4  76.6  8.3e-175    5e-171       2     661 .]      42     674 ..      41     674 .. 0.98

  Alignments for each domain:
  == domain 1  score: 570.4 bits;  conditional E-value: 8.3e-175
         MAD   2 aelieskaaleqlknelkqkelehkrarielekkasalkrqleeesdrnqelqkrikllekreeekeealreqiElarlkkknlealnkkekekeskla 100
                 a+++++++ale++kn+lkqke+e++r+r++l +k       l+ee++++++lq+r++l+ek+++e+e++++e +E+ r             +e+ s + 
  EPX74189.1  42 ARVQSLEFALENAKNDLKQKEIESDRERNDLLAK-------LTEEREQSKALQIRLSLIEKQDSEREANNHEVVERLR-------------SENGSLVL 120
                 8999******************************.......*************************************.............9******* PP

         MAD 101 earevisalknelaelkrqiekqelelsekeseleelqerldllkkklseleqli....qqlekkqkelaeaeqrikeLefeiqs......qeddsliv 189
                 e++ v+s  ++e++ l++++ek+++els k+ +le++q+r++ll++++s+le ++     ql+ k +el ++eq+i++L  ei++      q +dsl++
  EPX74189.1 121 ELSKVKSDSTQETSSLRTELEKTQQELSGKNLKLEDFQQRNKLLEENASQLESRNtslqDQLDIKLNELLDKEQQIQNLTNEIEKlkesvdQVSDSLVL 219
                 ******************************************************9777677788899******************************** PP

         MAD 190 knsksel.aripelekelerlreenkklnelkenkelLkEevedlkkkLereEkareelvkLelekekleqeLksWeklaqdtgLnlrsPealsrkieq 287
                 k+ +++l +r++elek++e++ + +++++++++n+e+L+Ee++dl++kL+++E+++e++++L +++ek + eL+ W+k+++    ++ +Pe +++k+++
  EPX74189.1 220 KDTNQKLlERVSELEKLQEKHLSIIERFSTNSRNVEILNEEKADLEAKLYQYEDYKEKVATLSVDLEKSQSELNTWRKTFT----DIDVPELAAEKFKT 314
                 *******9*************************************************************************....6************* PP

         MAD 288 LqqeeivlkeeksslesslkqlekaqreleqelaqllkkiedlkkkrkehkelkrRLQrrvllltkErdllrailesyDke...lteseaspklleRie 383
                 +q+e+++l e++s+l+++l q++ + +++  el++   ki d kk+  e +e+ rRLQr+v+l+++E++llra+l+syD+e   ++ + +++k+leRie
  EPX74189.1 315 VQSENKALTERVSDLTQQLLQERDQGPPMVVELNK---KIADFKKEILEINEQTRRLQRQVFLANQEINLLRANLKSYDDEeavMNSESSNQKKLERIE 410
                 ********************************998...9******************************************9*8888888999****** PP

         MAD 384 eaedlvqkvqahneeveaqlevaeeevggykqqastlerelqalr.qqesladassskeevdslkkkleeLelerqr.......LreqkeelElele.. 472
                 ++++l++++++ +e++++           y++ a++ + +l ++r ++e+++d ++    +++l++++++++l+ q+       Lr+q++ lE+ ++  
  EPX74189.1 411 SLNKLIDEYKILLENSKI-----------YNNGATAEDPSLSSKRpREEDQDDVGY----ITELYRENQHIQLQLQEklntegfLRDQINGLEVIIAel 494
                 **********99999999...........****************99*********....*************************************9* PP

         MAD 473 rreLqgdydlkktkVlhlseNPaakakqqkkeqlekLqaEierlkellkkleedkekkvaslpessltlafkevleLrkelesaelkiqrlKevFkaki 571
                 r+e+++ ++lk++kVl++++NP++k++++k+eql  L++E+e++k++l+       k+++++p++sl+la++++leL+kel +++++iqrlKe+F++k+
  EPX74189.1 495 RQEIIQISELKSSKVLQHRSNPTLKHERVKAEQLYLLEKENEGYKKILE------QKAIQTVPMESLELANRRTLELKKELLDRDKRIQRLKEIFSVKS 587
                 *************************************************......679***************************************** PP

         MAD 572 qEFRevvYmLlGYkidittnsqyRltSmYaeekedallfklsesne.sklkLletpfSrtleelidlhlaeqksiPaflsalTLeLfsrqt 661
                 +EFRe++Y+L+GYki++++n+++R+tSmY++e+++a++f    ++e s++kL+++p+S+++e+l++++++eqk+iP++l+alTLeL+++++
  EPX74189.1 588 LEFREAIYSLFGYKIEFLPNGSVRVTSMYSNESNTAFVF----DGEtSTMKLVGKPSSPDFERLVKFWCDEQKTIPGMLAALTLELIDKND 674
                 ***************************************....77779*****************************************97 PP

>> Atg14  Vacuolar sorting 38 and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -7.0  15.6         3   1.8e+04      36     129 ..      49     144 ..      36     146 .. 0.57
   2 ?    1.8  25.2     0.018     1e+02      18     124 ..     137     239 ..     125     294 .. 0.83
   3 !   18.2  10.4   1.8e-07    0.0011      29     157 ..     310     442 ..     306     464 .. 0.86
   4 ?   -6.1   9.8         3   1.8e+04      36     134 ..     461     571 ..     455     591 .. 0.63

  Alignments for each domain:
  == domain 1  score: -7.0 bits;  conditional E-value: 3
       Atg14  36 sekeslkkkiekalegkeeaeqledkiknkkakleelksliadlrerlqelkdklsqlkkeieekkkklaklsdklk........kRrsdleslqnele 126
                  + e  k+ +++++ + +      ++   + akl e + ++  l+ rl++++++ s++ + + e  ++l++ + +l         + +++ +sl++ele
  EPX74189.1  49 FALENAKNDLKQKEIESD------RERNDLLAKLTEEREQSKALQIRLSLIEKQDSEREANNHEVVERLRSENGSLVlelskvksDSTQETSSLRTELE 141
                 333333333333333333......444555677777788888888888888888888888888877777777777766666665644444455666666 PP

       Atg14 127 err 129
                 + +
  EPX74189.1 142 KTQ 144
                 555 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.018
       Atg14  18 rngperlyelrerlaklksekeslkkkiekalegkeeaeqledkiknkkakleelksliadlrerlqelkdklsqlkkeieekkkklaklsdklk..kR 114
                 r     l++ +++l   +++ e ++++ + ++e+ +   qle++  +++++l+ + ++  d+++++q+l   +++lk+++++ +  l  ++ + k  +R
  EPX74189.1 137 RT---ELEKTQQELSGKNLKLEDFQQRNKLLEENAS---QLESRNTSLQDQLDIKLNELLDKEQQIQNLTNEIEKLKESVDQVSDSLVLKDTNQKllER 229
                 45...8999*****************9998888888...*******************************************99998777777666688 PP

       Atg14 115 rsdleslqne 124
                  s+le+lq++
  EPX74189.1 230 VSELEKLQEK 239
                 8886666654 PP

  == domain 3  score: 18.2 bits;  conditional E-value: 1.8e-07
       Atg14  29 erlaklksekeslkkkiekalegke.eaeqledkiknkkakleelksliadlrerlqelkdklsqlkkeieekkkklaklsdklkkRrsdleslqnele 126
                 e+ + ++se+++l ++++++ ++   e +q    +  +++k+ + k++i +++e++++l+ ++   ++ei+  +++l++++d+ + ++s+    +n+ +
  EPX74189.1 310 EKFKTVQSENKALTERVSDLTQQLLqERDQGPPMVVELNKKIADFKKEILEINEQTRRLQRQVFLANQEINLLRANLKSYDDEEAVMNSE---SSNQKK 405
                 567889************77766653445667788999***************************************************9...667777 PP

       Atg14 127 errkkqiaklqdaik......rieqklsslssktles 157
                  +r ++++kl d++k      +i +++++ ++ +l+s
  EPX74189.1 406 LERIESLNKLIDEYKillensKIYNNGATAEDPSLSS 442
                 779999*********9999998888888888888887 PP

  == domain 4  score: -6.1 bits;  conditional E-value: 3
       Atg14  36 sekeslkkkiekalegke.......eaeqledkiknkkakleelksliadlrer......lqelkdklsqlkkeieekkkklaklsdklkkRrsdlesl 121
                  e+++++ +++++l+++          e   ++++++  +++elks + ++++        +   ++l+ l ke+e  kk l+++  ++   +++le++
  EPX74189.1 461 RENQHIQLQLQEKLNTEGflrdqinGLEVIIAELRQEIIQISELKSSKVLQHRSnptlkhERVKAEQLYLLEKENEGYKKILEQKAIQT-VPMESLELA 558
                 56777777777777777766665552222334455555555666666665555555554444556788999999999999999999988.566666766 PP

       Atg14 122 qneleerrkkqia 134
                 + +  e +k++++
  EPX74189.1 559 NRRTLELKKELLD 571
                 6666666655554 PP

>> DUF1192  Protein of unknown function (DUF1192)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1      0.65   3.9e+03      31      47 ..     135     151 ..     131     155 .. 0.81
   2 ?    5.2   0.1    0.0036        21      26      46 ..     193     213 ..     186     217 .. 0.85
   3 ?    6.7   0.1    0.0012       7.2      22      45 ..     344     367 ..     340     387 .. 0.89
   4 ?   -3.3   0.0       1.7   9.9e+03      28      48 ..     455     475 ..     454     477 .. 0.84
   5 ?    4.1   0.4     0.008        48      25      46 ..     487     508 ..     484     514 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.65
     DUF1192  31 lLeaEIaRleaaiakkk 47 
                  L+ E ++++++++ k+
  EPX74189.1 135 SLRTELEKTQQELSGKN 151
                 58899999999998886 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0036
     DUF1192  26 eerIalLeaEIaRleaaiakk 46 
                 e+ I+ L+ EI++l++ +++ 
  EPX74189.1 193 EQQIQNLTNEIEKLKESVDQV 213
                 688************988765 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.0012
     DUF1192  22 veELeerIalLeaEIaRleaaiak 45 
                 v EL++ Ia++++EI  + +++++
  EPX74189.1 344 VVELNKKIADFKKEILEINEQTRR 367
                 67*************999988776 PP

  == domain 4  score: -3.3 bits;  conditional E-value: 1.7
     DUF1192  28 rIalLeaEIaRleaaiakkka 48 
                 +I++L  E ++++ ++++k +
  EPX74189.1 455 YITELYRENQHIQLQLQEKLN 475
                 899999999999999998865 PP

  == domain 5  score: 4.1 bits;  conditional E-value: 0.008
     DUF1192  25 LeerIalLeaEIaRleaaiakk 46 
                 Le  Ia+L++EI  +++  ++k
  EPX74189.1 487 LEVIIAELRQEIIQISELKSSK 508
                 8899*********999877766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (681 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2943  (0.164147); expected 358.6 (0.02)
Passed bias filter:                      576  (0.0321267); expected 358.6 (0.02)
Passed Vit filter:                       112  (0.00624686); expected 17.9 (0.001)
Passed Fwd filter:                        53  (0.0029561); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.59u 0.37s 00:00:01.96 Elapsed: 00:00:00.57
# Mc/sec: 3624.90
//
Query:       EPX74190.1  [L=87]
Description: 40S ribosomal protein S25 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-31  108.9   0.5    1.3e-31  108.8   0.5    1.0  1  Ribosomal_S25  S25 ribosomal protein
  ------ inclusion threshold ------
       0.11   12.3   0.0       0.13   12.1   0.0    1.2  1  MarR_2         MarR family


Domain annotation for each model (and alignments):
>> Ribosomal_S25  S25 ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.8   0.5   1.4e-35   1.3e-31      20     100 ..       3      83 ..       1      84 [. 0.98

  Alignments for each domain:
  == domain 1  score: 108.8 bits;  conditional E-value: 1.4e-35
  Ribosomal_S25  20 kkKKwskgkvkdklnnavlfdketydkllkevpkyklitpsvvserlkingslArraLreleekgliklvskhraqviYtr 100
                     kKKwskgkvkdk+++a +fdk+++d++ kevp +k+i++sv+++r+k+ng+lAr a+r+l+++gli++v ++++q iY r
     EPX74190.1   3 PKKKWSKGKVKDKAQHATVFDKNLIDRINKEVPAFKFISVSVLVDRMKMNGALARIAIRDLADRGLIQKVDHSSKQFIYSR 83 
                    59*****************************************************************************98 PP

>> MarR_2  MarR family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   1.5e-05      0.13      23      55 ..      41      73 ..      25      78 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 1.5e-05
                EHHHHHHHHTSSHHHHHHHHHHHHHTTSEEEEE CS
      MarR_2 23 tvgelarrlglsksavsrilkrLvaaGLverrp 55
                +v+ l++r+++  + +  ++++L ++GL+++++
  EPX74190.1 41 SVSVLVDRMKMNGALARIAIRDLADRGLIQKVD 73
                99***************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       421  (0.0234815); expected 358.6 (0.02)
Passed bias filter:                      324  (0.0180713); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.22s 00:00:00.59 Elapsed: 00:00:00.38
# Mc/sec: 691.41
//
Query:       EPX74191.1  [L=678]
Description: 3'-tRNA processing endonuclease Trz1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-14   54.2   0.0    2.2e-14   53.4   0.0    1.3  1  Lactamase_B_2  Beta-lactamase superfamily domain
      3e-09   36.4   0.0    1.5e-08   34.2   0.0    2.2  2  Lactamase_B_4  tRNase Z endonuclease
      6e-07   29.7   0.0    1.3e-06   28.6   0.0    1.4  1  Lactamase_B    Metallo-beta-lactamase superfamily
  ------ inclusion threshold ------
        0.1   12.1   0.1       0.22   11.0   0.1    1.5  1  Lactamase_B_6  Metallo-beta-lactamase superfamily domain
       0.12   12.2   0.1       0.34   10.8   0.0    1.7  2  Lactamase_B_3  Beta-lactamase superfamily domain


Domain annotation for each model (and alignments):
>> Lactamase_B_2  Beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.4   0.0   6.2e-18   2.2e-14       3     201 .]     436     635 ..     434     635 .. 0.83

  Alignments for each domain:
  == domain 1  score: 53.4 bits;  conditional E-value: 6.2e-18
                    EEES--TTHHHHHTCGGS--S.SS--..SEEEEE-SS--HHHHGGGGCCCC.......C--EE...EEEEEEHHHHHHCCTTCGHHHCHTT....T CS
  Lactamase_B_2   3 iLiDagpdlrqqalralqPve.lrdelppidaVllthaHyDHlaglltlre.......lrpkk...lplyapkgvlavleanfvylaleee....p 83 
                    +L+D+g +   q+ r+   ++ l +  +++ +++++h H+DH  gl  +             +   l++++p++++  l++ +  + l +      
     EPX74191.1 436 VLLDCGEGSYSQLIRQY--GTnLDSVWRQLRLIFVSHMHADHWLGLVNILLtwnnstrS---SdskLTVVCPRSLRFWLSRVSESARLSQIikrlH 526
                    89******888855555..5556777889****************99988867666432...1467******999999999877766666677888 PP

                    TEEEEEE-TTSEEEECSTTEEEEEEEE-EE--CTCCE-TTTSEEEEEE.CTTEEEEEESS-S---HHHHHHHCT-SEEEEE-S-SSTTHHHH.HHT CS
  Lactamase_B_2  84 avnvheldwgesfelgdggleitatparhksgrrldrnagdtlGlrie.gggkrvyyigDtgyipeeigerlggadllllditayeddemir.hmg 177
                    +v++ ++ +g++  l  ++l++ ++p  h +            ++++  ++  +++y+ Dt     ++++  ++a +ll+++t+ +d + ++   +
     EPX74191.1 527 FVDASTVGIGNEYCLS-ENLSLYTVPSIHIADS---------HSVVLShKSSGKLVYSSDTRPNM-KLARAGKNATVLLHEATFEDDLRDEAvNRY 611
                    99999999*******7.5888888887777777.........99999989999*********554.55668888*********9888776559*** PP

                    ---STSHHHHCTTSSSSEEEEESB CS
  Lactamase_B_2 178 HltpeeaveaaadlgakrlvliHi 201
                    H+t++ea+ +a++++ak+l+l+H+
     EPX74191.1 612 HSTISEALMIAKKMQAKQLILTHF 635
                    ***********************7 PP

>> Lactamase_B_4  tRNase Z endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   0.0   4.2e-12   1.5e-08       3      63 .]      59     126 ..      57     126 .. 0.88
   2 ?   -1.4   0.0      0.55     2e+03      13      34 ..     425     445 ..     415     476 .. 0.72

  Alignments for each domain:
  == domain 1  score: 34.2 bits;  conditional E-value: 4.2e-12
  Lactamase_B_4   3 vttptsDtsg.PlllLqldskrYlfGkvgEgtQRavneqkvrl.sklesiFLtgkv.s....wssigG 63 
                    ++   +D    Pll+++ld+++Yl+G++gE +Q  ++ + +++ +k+   F+++        ws ++G
     EPX74191.1  59 ISDVAADNLIaPLLCVTLDDRKYLIGNMGELMQLKFRNHPLNYgGKILRSFMMPGSgRnynpWSATAG 126
                    66667777777************************************999999998437888988887 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.55
  Lactamase_B_4  13 PlllLqldskrYlfGkvgEgtQ 34 
                    ++ l++ d++  l+ ++gEg+ 
     EPX74191.1 425 SCYLVNVDNNIVLL-DCGEGSY 445
                    57788999999999.9999973 PP

>> Lactamase_B  Metallo-beta-lactamase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.6   0.0   3.5e-10   1.3e-06       7     159 ..     425     585 ..     422     619 .. 0.78

  Alignments for each domain:
  == domain 1  score: 28.6 bits;  conditional E-value: 3.5e-10
                  EEEEEEETTCEEEES--SCHHHHHHHHHHHHHTSGGGGEEEEE-SBSSHHHHTTGGGCTTHHCCEETCCEHHHHCCHCHHHHHHHHHCCHH....... CS
  Lactamase_B   7 nsyliegdggviLiDtGtsteaaraalelaalglkpkdvdavilTHlHlDHiGglgglveatdvpvgavaeeapalfmeeaddaasrkgll....... 97 
                  ++yl+  d+  +L D+G ++  +++++    l+  +++++ ++++H+H+DH  gl  +  ++++ ++    ++ +  ++ + ++ sr +         
   EPX74191.1 425 SCYLVNVDNNIVLLDCGEGSYSQLIRQYGTNLDSVWRQLRLIFVSHMHADHWLGLVNILLTWNNSTRSSDSKLTVVCPRSLRFWLSRVSESarlsqii 522
                  7*****************************************************************99999988888888888887777666666666 PP

                  .TTCHCGCCEEEEETTTEECCCTEEEEEHECTTSTSCCEEEEEETTCCEEEECTTTSSHHCCC CS
  Lactamase_B  98 .lagvsadkpdvdeeeldgnaggrralyvtggpghghghgvveygggkvlftGDallagetgr 159
                   +  +++ + +   +e+ + +   + +++  + + +h+++  +  +gk++++ D+ ++ + +r
   EPX74191.1 523 kRLHFVDASTVGIGNEYCLSENLSLYTVPSIHIADSHSVVLSHKSSGKLVYSSDTRPNMKLAR 585
                  655566656666666666666666666666666666666666666666666666666655555 PP

>> Lactamase_B_6  Metallo-beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1     6e-05      0.22       1      57 [.     428     484 ..     428     501 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 6e-05
  Lactamase_B_6   1 lLeldnvkiLlDvGwdeskvslesalkelekviptvdliLLshatlehlGayallya 57 
                    l+++dn  +LlD+G  +++  +++   +l++v  ++ li +sh  ++h  +++ ++ 
     EPX74191.1 428 LVNVDNNIVLLDCGEGSYSQLIRQYGTNLDSVWRQLRLIFVSHMHADHWLGLVNILL 484
                    6899************99999999999*******************99777766555 PP

>> Lactamase_B_3  Beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   9.5e-05      0.34       7      50 ..     424     476 ..     420     483 .. 0.88
   2 ?   -3.0   0.0       1.7     6e+03     140     163 .]     611     634 ..     605     634 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 9.5e-05
  Lactamase_B_3   7 hnsflletagarilvDPf.........kanlgyeppaeeaDlvlisqaledHa 50 
                     +++l+++++  +l+D +         +++++++  +++  l+ +s+ ++dH+
     EPX74191.1 424 LSCYLVNVDNNIVLLDCGegsysqlirQYGTNLDSVWRQLRLIFVSHMHADHW 476
                    69**************998888888855588888889***************7 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.7
  Lactamase_B_3 140 ltlgqeealelakrLkpklvlPmh 163
                    + +   eal +ak++++k  + +h
     EPX74191.1 611 YHSTISEALMIAKKMQAKQLILTH 634
                    56778899*********9998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (678 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       506  (0.0282224); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.57u 0.28s 00:00:00.85 Elapsed: 00:00:00.42
# Mc/sec: 4878.14
//
Query:       EPX74192.1  [L=403]
Description: But2 family protein But2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-26   93.7   1.5    3.3e-26   92.4   1.3    1.8  2  But2      Ubiquitin 3 binding protein But2 C-terminal domain
  ------ inclusion threshold ------
      0.056   14.3   0.1        1.7    9.5   0.0    2.5  2  FctA      Spy0128-like isopeptide containing domain


Domain annotation for each model (and alignments):
>> But2  Ubiquitin 3 binding protein But2 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.47   4.2e+03      81     128 ..     125     173 ..      97     180 .. 0.56
   2 !   92.4   1.3   3.7e-30   3.3e-26       2     142 .]     241     388 ..     240     388 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.47
        But2  81 patesttynnkPavk..eelgkttlspGnaytiasfpCpagqavsyevss 128
                   t++t y++k      ++++ t+ +p n++  +++ C + + ++y+++ 
  EPX74192.1 125 QFTNHTDYKKKQHDDgsHRVDLTQRKPANDFAATQA-CGKLDPFGYVLKR 173
                 445666666653332002333356666666666555.7777777776665 PP

  == domain 2  score: 92.4 bits;  conditional E-value: 3.7e-30
        But2   2 fPhlIvpvssssPdkafgtsyngtvss..t.dvstifnFdipas...aagktCslvflfptqsqletssytlsGsgkfkfsklaapatesttynnkPav 94 
                  Ph I+++++++Pdk++++ + + vs+  + ++s++ +Fd+p     +++++C l+ +++++ + + ++++ +G+++f ++++++  +++tt ++ P++
  EPX74192.1 241 QPHGIYNYNYNKPDKRMQRFTIPRVSNadGqNQSVLQTFDVPYGrslYYYTSCALEVRLNNEFF-PLNVSSSNGPAEFVVYNMSGNPKKQTTPKKGPQR 338
                 6*************************998458**********666799**************98.********************************** PP

        But2  95 keelgk.ttlspGnaytiasfpCp.agqavsyevssa.gdtsLeffqdynp 142
                  +e+++ ++++ G++yt++++ Cp ag++++ye+++a  dts++++++ +p
  EPX74192.1 339 LHEVARfQCSNKGCEYTTNIA-CPrAGHSHTYEIAAAsPDTSMSWVHTLSP 388
                 ******99************9.*88********************987665 PP

>> FctA  Spy0128-like isopeptide containing domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.0   0.00019       1.7      46     117 ..      50     128 ..      30     133 .. 0.56
   2 ?    2.0   0.0     0.038   3.4e+02      39      79 ..     335     392 ..     309     403 .] 0.56

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00019
                 EEE-GTS......EGTTS--SSSE.EEEEEEEEE-SS-TEE---...-EEEEEEEEE.TTSS...............EB--EEEEE CS
        FctA  46 etaeegk......tFgeitfdkagktYtYtvsEekpekGvtyDt...atytvtvtvtdngdGtLeaevtyek.....kedeltFtN 117
                 +     +      tFg ++f ++   Y+Ytv  ++p++G ty     ++++ +v + d++   L+ +   +k      +++l+FtN
  EPX74192.1  50 N-----TgaginrTFGMLSFREKS-GYDYTVWHVSPTTGKTYLRpwdDAVDPSVFMIDEA-SFLRLASDSNKfafigHNQDLQFTN 128
                 2.....1233344*******6666.4*******999998887422224444555555433.2344333333444565555566666 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.038
                 -SS-EEEEEE-G..TS...EGTTS--SSSE.EEEEEEEEE-SS-............TE CS
        FctA  39 keeaeeketaee..gk...tFgeitfdkagktYtYtvsEekpek............Gv 79 
                  ++  ++ +  +  +k     ++i  ++ag+++tY++   +p++            G+
  EPX74192.1 335 GPQRLHEVARFQcsNKgceYTTNIACPRAGHSHTYEIAAASPDTsmswvhtlspriGM 392
                 2222222222223222454446888899**9******987777766555555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (403 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       448  (0.0249875); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2921.80
//
Query:       EPX74193.1  [L=323]
Description: reticulon-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.9e-22   79.9   7.4    2.6e-22   79.5   7.4    1.2  1  Reticulon  Reticulon
     0.0046   15.1   0.2     0.0078   14.4   0.2    1.3  1  Patched    Patched family


Domain annotation for each model (and alignments):
>> Reticulon  Reticulon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.5   7.4   2.9e-26   2.6e-22       3     155 ..     145     301 ..     143     303 .. 0.93

  Alignments for each domain:
  == domain 1  score: 79.5 bits;  conditional E-value: 2.9e-26
   Reticulon   3 dlllWrnkkksgivlgglllllllfellgysllslvsklllllllvlflwaeyagllnkskp.......pepelelseesvreladsllellnkalsel 94 
                  +l+W+n   s+++l+++l+++++  +   ++ +l+++++  ++l++ +  e+ gl+   +        + ++++++ +s++ +++sl++ +n +l ++
  EPX74193.1 145 HVLTWKNVSCSFSTLLSILAVFFIPAWI--NIPRLFFRTIRYVFLITSI-IEFGGLFASGGRrgvlspfRNKYITCNTKSIDCFVNSLIDVVNVLLIQF 240
                 69**************************..********99999999999.888888887544566655566**************************** PP

   Reticulon  95 rrlalgedlklflkvalllyilsilgslfslltllyigvvlaftvPllYekyedeIdalve 155
                 +r++++e + l++ va++++i ++l  ++s+  l++  v++aft+P+lYe +e+ I++lv 
  EPX74193.1 241 QRVLFAECPILTFAVAIGAFIEYFLSGFLSYRGLCIWNVLFAFTLPKLYEMNETAIKRLVH 301
                 *********************************************************9986 PP

>> Patched  Patched family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.2   8.7e-07    0.0078     740     794 ..     132     189 ..     126     198 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 8.7e-07
     Patched 740 kddakeRvveal.ealgwPvvqgalSTilgvlvLlfvds..ymvqvFfktvvLvvvig 794
                 +++ +  v++al   l w  v ++ ST+l +l ++f+++  ++ + Ff+t+  v +i 
  EPX74193.1 132 QQNVDPEVASALwHVLTWKNVSCSFSTLLSILAVFFIPAwiNIPRLFFRTIRYVFLIT 189
                 44677778888834589*********************9334679*****98887764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1247  (0.0695521); expected 358.6 (0.02)
Passed bias filter:                      657  (0.0366445); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 2270.67
//
Query:       EPX74194.1  [L=265]
Description: hypothetical protein SOCG_03406 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.048   13.8  12.7        0.2   11.7  11.1    1.9  2  PARM      PARM


Domain annotation for each model (and alignments):
>> PARM  PARM
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7  11.1   1.1e-05       0.2      26     190 ..       5     172 ..       1     187 [. 0.74
   2 ?    1.7   0.0     0.013   2.4e+02     128     164 ..     223     259 ..     214     263 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.1e-05
        PARM  26 atwtsspqntaavtasptsgtssnsvlpvt.asaetstlpknvsvepreeeatspaskwe.....gtetdpssvklsstssgveltptpeehssgtpea 118
                   w+ s+qn    + s ++g+ ++ v+    +++++s+l  n+   + e+e+t   s +e      +++d+ + +++  ss++e t++p +  s   + 
  EPX74194.1   5 KRWVRSSQNH--SSPSDEKGSLTKNVFGFHsKKSQKSPLRDNIEDVEDENEQTLLHSIREssaskRQKKDKFQDDIQDFSSEEESTSAPLG--SHDLHN 99 
                 5799999999..6677777888888887765899**********99999999988777774333344555566677788888877777544..444457 PP

        PARM 119 svpatgsqspaesptltSpqapasspsslstslppevssasvstnhssaetstkptgapt.tpespteehssa 190
                 s ++t s   + s+  tS   +  sp+s+   ++ + s++sv  ++ s++++  p + p  ++ sp  +++ +
  EPX74194.1 100 SSATTNSGVYSSSSPRTSKAFSFQSPKSVKREQALQKSPVSVHLAKFSQAATGTPPPKPVfSNRSPFLDKKKK 172
                 77788888888888889999999999999999999999****9999988877776666651556776666555 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.013
        PARM 128 paesptltSpqapasspsslstslppevssasvstnh 164
                  + ++ l   ++p+ s  + s slpp v s ++ + +
  EPX74194.1 223 DSRKNYLLCKKTPVESDRPFSLSLPPPVYSNQIGSID 259
                 55667788899*******************9987755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (265 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1457  (0.081265); expected 358.6 (0.02)
Passed bias filter:                      538  (0.0300073); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 1830.48
//
Query:       EPX74195.1  [L=430]
Description: AP-3 adaptor complex subunit Apm3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.5e-46  159.0   0.7    1.9e-46  158.6   0.2    1.4  2  Adap_comp_sub  Adaptor complexes medium subunit family


Domain annotation for each model (and alignments):
>> Adap_comp_sub  Adaptor complexes medium subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0      0.25   4.5e+03     147     160 ..      65      78 ..      51      90 .. 0.79
   2 !  158.6   0.2     1e-50   1.9e-46       1     263 [.     164     428 ..     164     429 .. 0.82

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 0.25
                    EEEEEEEE--TT-E CS
  Adap_comp_sub 147 envkisiplpkevs 160
                    ++v+i ip++++++
     EPX74195.1  65 DDVRICIPVTRDTE 78 
                    68999999999865 PP

  == domain 2  score: 158.6 bits;  conditional E-value: 1e-50
                    XXXXXXXXXXXX-EEEEEEEEEEEEEE-TTS-EEEEEEEEEEEEEE---TT-EEEEEE-SS-EE--SSEESEEEEETT-B-TTHHH.H-EEEE--- CS
  Adap_comp_sub   1 iswrrkgikykkneiyldviErvsvlvdkkGkilksevqGtiacksklsgmpelklgLndklnkekkielddvsfHqcVnldkfes.ervisFiPp 95 
                    ++wr+++ +y++ne+++++iErvs+++d + +++    + +++cks+lsg pel l L   +++      ++++fH+c+++++++  + +++FiPp
     EPX74195.1 164 VPWRTSKARYTNNEFFIRIIERVSAVFDGNHQLVFGTLKVDVECKSQLSGIPELLLYLAPGSTM------ENPKFHNCIDVKRWRDrPLQLQFIPP 253
                    69*************************************************************9......**************98799******* PP

                    SEEEEEEEEEE.S--SS--SEEEEEEEEE-TTTSEEEEEEEEEE-S-TT-EEEEEEEEEE--TT-EEEEEEESSTT-EEEEET......TEEEEEE CS
  Adap_comp_sub  96 dgeftLmrYrl.sannvklPfsvkpkvklsgdevrveielklkenfkkkltlenvkisiplpkevsnlaiktskGkakynpee......naleWti 184
                    +g+f+L+++++  ++++ lP+ v+ k  +   ++ +ei++++ ++      +en++++iplp++ s+++   ++G++   p++       +leWti
     EPX74195.1 254 EGKFVLASFQTdLSKQKPLPLNVEAKNMT---DGNFEIRIRNIGK----KPIENLEVRIPLPSSLSSVTA--TNGDYICRPSKstsddgAVLEWTI 340
                    ***********888888999888888655...4667777777633....47************9887766..4444444444333444489***** PP

                    --EETT-EE...EEEEEEE--------------.........EEEEEEEET--SS---EEEEEEE-------EEEEEEEEEEEEEEE- CS
  Adap_comp_sub 185 kklpggnes.slsgeleleaesekkeenprdgkl........vsveFkipgftaSgikVeslkveeresykpfkwvryvtvsgeyeir 263
                    kk+++++ +  l+g+l+ ++e++ +e  ++  +         +++++k+p + +S++k++slk+++r + k+fk+v++++ ++++++r
     EPX74195.1 341 KKIEWTSPAyVLKGTLNSKQELSISEISDQSSEKnalpklehLTLHYKYPLTILSRFKIDSLKISNRPDMKSFKGVKHSVIAQDVSVR 428
                    **9998877645555555544444433333222233345599*******************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (430 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       344  (0.0191868); expected 358.6 (0.02)
Passed bias filter:                      297  (0.0165653); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.29s 00:00:00.86 Elapsed: 00:00:00.49
# Mc/sec: 2615.12
//
Query:       EPX74196.1  [L=389]
Description: Smc5-6 complex non-SMC subunit Nse5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (389 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       513  (0.0286129); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.45
# Mc/sec: 2618.23
//
Query:       EPX74197.1  [L=558]
Description: RNA polymerase II associated Paf1 complex [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.6e-31  107.1   0.0    1.8e-30  105.6   0.0    1.8  1  Plus-3    Plus-3 domain


Domain annotation for each model (and alignments):
>> Plus-3  Plus-3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.6   0.0     1e-34   1.8e-30       1     108 [.     215     316 ..     215     317 .. 0.95

  Alignments for each domain:
  == domain 1  score: 105.6 bits;  conditional E-value: 1e-34
      Plus-3   1 dlnkirlsRskleklleepffedavkgcfvRvkigeeretgqpvyrlaqivgvkeeekgkpyklkkgkkttnkylklrhgkseksfrlekvSnspftee 99 
                 +ln+ir++R+++++++++p+fe++++gcf Rvkige   +gq vyrl+q++g++e   +kpy++  +   t+ yl++ hg+s++ f+ + +Sn+pfte+
  EPX74197.1 215 ELNSIRMGRKHVAEYMYHPTFENTITGCFTRVKIGER--DGQGVYRLCQVKGISE--GRKPYRV--EGVLTKTYLECFHGRSKRVFEASVLSNEPFTES 307
                 59*********************************54..89************65..9******..6799***********9***************** PP

      Plus-3 100 Eferwkktl 108
                 +f+rw +++
  EPX74197.1 308 DFQRWFHQM 316
                 *****9988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (558 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1681  (0.0937587); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.29s 00:00:00.96 Elapsed: 00:00:00.45
# Mc/sec: 3716.26
//
Query:       EPX74198.1  [L=1405]
Description: DNA-directed RNA polymerase III complex large subunit Rpc1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-93  313.4   0.1    2.9e-93  312.6   0.1    1.4  1  RNA_pol_Rpb1_1  RNA polymerase Rpb1, domain 1
    5.7e-79  265.3   0.6    9.1e-79  264.6   0.6    1.3  1  RNA_pol_Rpb1_5  RNA polymerase Rpb1, domain 5
    5.8e-73  244.6   0.0      1e-72  243.8   0.0    1.4  1  RNA_pol_Rpb1_2  RNA polymerase Rpb1, domain 2
    6.3e-40  136.7   0.0    1.2e-39  135.7   0.0    1.5  1  RNA_pol_Rpb1_3  RNA polymerase Rpb1, domain 3
    3.3e-32  110.6   0.0    8.7e-32  109.3   0.0    1.8  1  RNA_pol_Rpb1_4  RNA polymerase Rpb1, domain 4


Domain annotation for each model (and alignments):
>> RNA_pol_Rpb1_1  RNA polymerase Rpb1, domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  312.6   0.1     8e-97   2.9e-93       2     312 .]      11     350 ..      10     350 .. 0.95

  Alignments for each domain:
  == domain 1  score: 312.6 bits;  conditional E-value: 8e-97
                     E---EEEEEE--HHHHHHH-SBB--STTSTCSTSSSSBBSSSSSSSSS-SSSSSTSTTTSSTTTT-----EEEEEECEEE-HHHHHHHHHHCTTC CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  RNA_pol_Rpb1_1   2 kkikeiqfgiaspeeirkwSvvevtkaetieekslkPeegGllDerlgtidkdleCetCgkkkkeCeghfGhieLakPvfhigffklilkilecv 96 
                     kkik++qfgi  p+e+ k ++vev +++++++++++P+e+G lD ++gt++k+++C+tCg+++++C+ghfG+++La Pvfhig+fk+ ++il+++
      EPX74198.1  11 KKIKHLQFGISGPKEFVKDATVEVFSRDLYTMTDRSPAEHGALDLHMGTSNKTINCTTCGESMADCMGHFGYVKLALPVFHIGYFKAAMTILQNI 105
                     89********************************************************************************************* PP

                     ETTTTEBSS-TTSH....HHHHHHCSSSCC..CCHHHHHHHHCCS-BE-SSSSB-EEE.......................EEETTEEEEEESSS CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxx.......................xxxxxxxxxxxxxx RF
  RNA_pol_Rpb1_1  97 ckecskllldeekkkllsklkkrekleelk..krlkaieelckkinlcekCgavqpkl.......................eeegeklkaalkks 166
                     ck cs++ll++ +k+++ k+ +r+ +++lk  + +k+i++ ckk + c  C+ +q+ +                        e  +++ +a+k+ 
      EPX74198.1 106 CKDCSSVLLSDPEKRQFLKELRRPGIDNLKrsQICKRINDQCKKTRRCPVCDSMQGVVkkagplkiiherfryarksqddeGEFRHTFDEAIKTI 200
                     *****************************98899*******************999998888998888888888888666555555666666666 PP

                     ST......SCEEEE-HHHHHHHHHCSTHHHHHHTTSBTTTB-GGGCCECCEEE--GGGS-BEESSSSSEEBECCCCHHHHHHHHHHHHHHHHHSS CS
                     xx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  RNA_pol_Rpb1_1 167 ke......eekeklsaekvkkllkriededvevlgfkssgsrPewliltvlPVpPpeiRPsvqldggrrsedDlteklrdiikrNnrLkkaeeeg 255
                      e      +++++l++ kv++l+k+i+  d+e+lg++++  rPe+l+++++P pP +iRPsv+ +g +++edDlt k+++i+++ + ++ a+++g
      EPX74198.1 201 PElkmhisKAHDDLNPLKVLNLFKQINPVDCELLGMDPEFGRPENLLWQYVPAPPICIRPSVAQEG-ATTEDDLTVKITEIVWTSSLIRAALSKG 294
                     66999998999*****************************************************99.9*************************** PP

                     SSSTCHHHHHHHHHHHHHHCC-TTSSSSSEEBSTTSSS--THHHHHTSSSSCCCCCT CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  RNA_pol_Rpb1_1 256 apeliieeekelLQehvatlfdneisglkpatqkskrplkslsqrLkGKeGrfRgnL 312
                     +p + ++e++e++Q+++a+++++e++gl+p +++ ++p+++l+qrLkGK GrfRgnL
      EPX74198.1 295 TPVSNLMEQWEFMQLSIAMYINSEMPGLRP-SDMPSKPVRGLCQRLKGKSGRFRGNL 350
                     ******************************.88999********************9 PP

>> RNA_pol_Rpb1_5  RNA polymerase Rpb1, domain 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  264.6   0.6   2.5e-82   9.1e-79       1     265 [.     835    1328 ..     835    1330 .. 0.98

  Alignments for each domain:
  == domain 1  score: 264.6 bits;  conditional E-value: 2.5e-82
                      B--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEETTSEEEETTS-EEESSGGGTS........................... CS
                      xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........................... RF
  RNA_pol_Rpb1_5    1 GLkvkefffhtmggReGLiDtAvkTaesGYlqRrlvkaledvvvkyddtvrnsggeivqflygedg........................... 66  
                      GL+++ef fh+  gReGL+DtAvkTae+GY++Rrl+k+led+   yd+tvr+s+ ++vqflyg+dg                           
      EPX74198.1  835 GLTPTEFLFHAISGREGLVDTAVKTAETGYMSRRLMKSLEDLSSAYDGTVRSSNSDVVQFLYGDDGldptymegdgqavefsrswthsvnisg 927 
                      9******************************************************************************************** PP

                      ............................................................................................. CS
                      ............................................................................................. RF
  RNA_pol_Rpb1_5   67 ............................................................................................. 66  
                                                                                                                   
      EPX74198.1  928 dkrdppllpyqiinntntslsqqrfvqncnrdfietirkfvtqkiaiqmakvrenrglspmleepdlddmddfesddfaplaakksveniirv 1020
                      ********************************************************************************************* PP

                      ...................B--TT-BHHHHHHHHHHHHHHCCCSSTTSSTCSSTSSSSSSHHHHHHHHTT-SS-SS-EEEEEB-SSSSSCHHH CS
                      ...................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  RNA_pol_Rpb1_5   67 ...................lvepGeavGiiaaQSiGePgTQltlnTFHfaGvasknvtlGvprlkeilnvskniksksltvllvdeeakelek 140 
                                          vepG+avG++ aQSiGePgTQ+tl+TFHfaGva+++ tlGvpr+kei+n++k+i+++ +t +lv++   + ++
      EPX74198.1 1021 tekqlntfldycwekymraKVEPGTAVGAVGAQSIGEPGTQMTLKTFHFAGVAAQT-TLGVPRIKEIINAAKAISTPIITGQLVNSS--DERS 1110
                      ****************************************************9987.9***************************99..7778 PP

                      CHHHHHHHSE................................................................................... CS
                      xxxxxxxxxx................................................................................... RF
  RNA_pol_Rpb1_5  141 akkvkkaiek................................................................................... 150 
                      a+ vk++iek                                                                                   
      EPX74198.1 1111 ARVVKGRIEKtylkdvtsyieevygpmsayiaiqvnystisklqlditladiaaaiwsdrklkipsqqvtvnnslqqihvhtssegksgesel 1203
                      899999999999********************************************************************************* PP

                      .................CBTTEEEEEEEEEEEEEEETEEEEEEECS--HHHHTTSTTTBETTTEEESSHHHHHHHHCHHHHHHHHHHHHHHHH CS
                      .................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  RNA_pol_Rpb1_5  151 .................gikkikrilvkeaekgkeeekelvletegvnlsevlkveevvdageilsndiaeileilgieaarkallkeiqevy 226 
                                       g+++i+r ++++++ gk     + l +eg  l+ev+++e+ +  +++++n++ e+  +lgieaar+ +++ei  ++
      EPX74198.1 1204 yyrlqnykralpdvivaGVPEINRSVINQED-GK-----IELFMEGYGLREVMNTEG-IVGDKTTTNHVMEMKAVLGIEAARTSIISEIGYTM 1289
                      *****************9******9999544.33.....34679*************.999******************************** PP

                      HHTTS---HHHHHHHHHHHTTTSS---SSTTCHCCSSSH CS
                      xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  RNA_pol_Rpb1_5  227 kvqgvsvndrHlelivdqmtkkgeivavnrsGinkaels 265 
                      +++g++v+ rH++l+ d+mt+kge++ ++r G+ k++ s
      EPX74198.1 1290 AKHGLTVDPRHIMLLGDVMTCKGEVLGITRFGVSKMKDS 1328
                      **********************************99876 PP

>> RNA_pol_Rpb1_2  RNA polymerase Rpb1, domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  243.8   0.0   2.9e-76     1e-72       1     166 []     352     519 ..     352     519 .. 0.98

  Alignments for each domain:
  == domain 1  score: 243.8 bits;  conditional E-value: 2.9e-76
                     SEEESSEEEEEEEEESSS-TTEEEEEHHHHTTSEEEEE-STTTHHHHHHHHHHTTTSSSSEEEE.ESTTSSEEETTTT-S.CHHCCTTTTSEEEE CS
  RNA_pol_Rpb1_2   1 GkrvdysaRsvispdpnlkldevgvPisvakkltvpeivtelnikklrklvengpevyPgasyv.kredgsekklkakkr.klakelekgdiver 93 
                     Gkrvd+s+R+vispdpnl++d+v+vP+++ak+lt+pe+vt++n++ l+++++ngp+v+Pga+y+ +re++ ++ l+  +r ++a++l++gdiver
      EPX74198.1 352 GKRVDFSGRTVISPDPNLRIDQVAVPYRIAKILTFPERVTTQNKTYLQQCIKNGPDVHPGANYIiDRESDLKRFLRFGNRnRIADDLKIGDIVER 446
                     9**************************************************************978889999*****99988************* PP

                     E--TTSEEEEE-SSTTSGGGEEEEEEEEESSSSEEEEGGGHCCCT--SSS-EEEEE--SSHHHHHHHHHCSBT CS
  RNA_pol_Rpb1_2  94 hvkdgdvvllNRqPsLhklsimahrvkvlekktlrlnlsvttayNaDFDGDemnlhlpqseearaEaeelllv 166
                     h++d+dv+l+NRqPsLhklsimah vkv +++tlr+n++v+ +yNaDFDGDemnlh+pq++ea++Ea el+ v
      EPX74198.1 447 HLNDNDVILFNRQPSLHKLSIMAHLVKVRPWRTLRFNECVCGPYNADFDGDEMNLHVPQTQEAKTEALELMGV 519
                     **********************************************************************975 PP

>> RNA_pol_Rpb1_3  RNA polymerase Rpb1, domain 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.7   0.0   3.4e-43   1.2e-39       1     157 []     522     697 ..     522     697 .. 0.93

  Alignments for each domain:
  == domain 1  score: 135.7 bits;  conditional E-value: 3.4e-43
                     CSEETTTTEESSS--THHHHHHHHHSSTTEEEEHHHHHHHHHHSSSCCSSSSSSSSSBESSSEBEEHHHHHHCCCHC......CCCEEEE..SSS CS
  RNA_pol_Rpb1_3   1 nilspqsgkPvigivQDsllGvyllTkedvfidreeaqqllykgvgsdsktvtlrpailkpkelwtgkqtfsrilpn......einyerk..nee 87 
                     n++sp++g+P+i+ +QD+++++yll+ +d+f+dr+ + +++ ++v+ + +++ ++pailkp+ lwtgkq+fs+++ +      ++n++ k  +  
      EPX74198.1 522 NLVSPRNGEPIIAATQDFITASYLLSLKDTFLDRKSFANICCYMVDASMHIDMPPPAILKPRCLWTGKQLFSVLMKPsrfspvQVNLDAKtrS-- 614
                     89******************************************9999999*************************99999887777776441.. PP

                     S.............STSEEECSSEEEES--SHHHHSSSSTTSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCEB-TGGGG CS
  RNA_pol_Rpb1_3  88 k.............dgkvlikngelikGvidkkvvgkksqgslihvlakeygiketvrfldslqrlgfkyllqsgftigigDt 157
                                   dg+ +i+n+e+i+Gv+dk+vvg+ +++sl++v+ ++yg+ e+++ + +l++++ +++ ++gf+igi+D+
      EPX74198.1 615 FsriksktpemcpkDGYLMIRNSEIIAGVVDKSVVGDGKKNSLFYVILRDYGSMEAAEAMTRLSKMCARFMGNRGFSIGISDV 697
                     14455677889999********************************************************************6 PP

>> RNA_pol_Rpb1_4  RNA polymerase Rpb1, domain 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.3   0.0   2.4e-35   8.7e-32       3     108 .]     724     828 ..     722     828 .. 0.96

  Alignments for each domain:
  == domain 1  score: 109.3 bits;  conditional E-value: 2.4e-35
                     HHCTHTCCHHHTTHCHHHHHHHHHHHHHHHHHHHHHHHHHHCST.TTSHHHHHHHCTSSS-HHHHHHHHTB-EEEEBTTBSS--SSTSCSSTTSS CS
  RNA_pol_Rpb1_4   3 eaerygkledlpgksleelfeakinkilnkardkagkiasksla.asNsiliMvksGaKGsiinisqiagclGqqnvegkripkgfsgrtlphfk 96 
                     ++ + g le +pg  +e+++eaki++ l+k+rd++g+i+ ++l    Ns liM+ +G+KGs+in+sq+++c+Gqq ++gkr+p+gf++r+lphf+
      EPX74198.1 724 QYAK-GTLETQPGLDQEATLEAKISSTLSKVRDDVGEICMDELGpM-NSPLIMATAGSKGSKINVSQMVACVGQQIISGKRVPDGFQDRSLPHFH 816
                     5666.899************************************66.************************************************ PP

                     SSESSTTTSSEE CS
  RNA_pol_Rpb1_4  97 kidespesrGFv 108
                     k+++ p ++GFv
      EPX74198.1 817 KNSKHPLAKGFV 828
                     ***********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1405 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       523  (0.0291706); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.84u 0.29s 00:00:01.12 Elapsed: 00:00:00.46
# Mc/sec: 9146.46
//
Query:       EPX74199.1  [L=264]
Description: hypothetical protein SOCG_03411 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       674  (0.0375927); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1953.48
//
Query:       EPX74200.1  [L=249]
Description: EAP30 family protein Dot2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.9e-57  193.7   0.0    3.3e-57  193.5   0.0    1.0  1  EAP30         EAP30/Vps36 family
     0.0027   17.6   0.0      0.004   17.0   0.0    1.2  1  AbiGi         Putative abortive phage resistance protein AbiG
  ------ inclusion threshold ------
      0.079   12.9   0.7       0.14   12.0   0.7    1.4  1  Phage_Mu_Gam  Bacteriophage Mu Gam like protein


Domain annotation for each model (and alignments):
>> EAP30  EAP30/Vps36 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  193.5   0.0   5.6e-61   3.3e-57       1     236 []       5     225 ..       5     225 .. 0.92

  Alignments for each domain:
  == domain 1  score: 193.5 bits;  conditional E-value: 5.6e-61
       EAP30   1 vGiaglqrreqtaaeyqdlgaellaealqdleallakfkesLvklaekhkakiksdpafraqftkmcaslGvdplsskkseslgflellglgdfyyeLa 99 
                 vGi++l+  ++  ++y+++g+el++++++++ ++l++f+e+L+++a++h+a+i+++++fr++ftk+  ++G+dpl+s ++es   ++++g+++fy ++a
  EPX74200.1   5 VGIGALN--KDPIKQYEKVGNELIEQQAEEIASQLSTFQEALKNFAKEHAAEIRNNAEFRKTFTKLSLKIGLDPLVSGSKES--AWSAVGINEFYLQVA 99 
                 5777774..3456778889********************************************************7774444..59************* PP

       EAP30 100 vqivevclatraengglisleelyalvnrarggv..alvspdDllraiekllvlgsglsvlqvggkkvvrSvptelntdqvevlevakrlvsllaekss 196
                 v+i+evc at+ enggl+s +++++ +n +++++  +l+++dD++ra+ +l++lg g  +  + gk ++rS p el++dq+ vle+++ l         
  EPX74200.1 100 VRIIEVCHATQLENGGLVSGSRVCQYLNDENEASgyDLLTEDDIVRAVTALKPLGPGCDIEVIAGKRYIRSLPLELSKDQNVVLEAVEVL--------- 189
                 ****************************977655436******************777777777****************999******9......... PP

       EAP30 197 gggvtaselaeeeenlgwsvarakeaLeelereGllwvDd 236
                 g +vt+++l   ++n+gw+++r+  +L++l+++ llw+D+
  EPX74200.1 190 G-YVTVTML---KDNYGWDRGRCIHVLNDLVSKSLLWIDN 225
                 5.*******...899************************6 PP

>> AbiGi  Putative abortive phage resistance protein AbiGi, antitoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   6.7e-07     0.004      92     139 ..      23      70 ..       8      89 .. 0.85

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 6.7e-07
       AbiGi  92 lefkesehsklesslelfliyiktfdksenksfylerEWRlvpnllsi 139
                 +e++e++ + ++s+l +f++ +k+f k+   ++  + E R ++ +ls+
  EPX74200.1  23 NELIEQQAEEIASQLSTFQEALKNFAKEHAAEIRNNAEFRKTFTKLSL 70 
                 459***************************************998764 PP

>> Phage_Mu_Gam  Bacteriophage Mu Gam like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.7   2.4e-05      0.14      34      72 ..      24      62 ..       7      74 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.4e-05
                  HHHHHHCHHHHHHHHHHHHHHHHHHHCTHHHH-..---- CS
  Phage_Mu_Gam 34 ekleaeleplkkeieylesllkqYaeankdeLfkdgktK 72
                  e  e+++e+++++ + ++++lk +a+++ +e+ ++++ +
    EPX74200.1 24 ELIEQQAEEIASQLSTFQEALKNFAKEHAAEIRNNAEFR 62
                  67899***************************9999877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1170  (0.0652574); expected 358.6 (0.02)
Passed bias filter:                      941  (0.0524848); expected 358.6 (0.02)
Passed Vit filter:                        89  (0.00496402); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 1740.85
//
Query:       EPX74201.1  [L=235]
Description: hypothetical protein SOCG_03412 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    0.00047   20.2   0.3    0.00064   19.7   0.3    1.1  1  JAKMIP_CC3     JAKMIP CC3 domain
  ------ inclusion threshold ------
      0.044   13.4   3.0        1.1    8.7   0.2    2.0  2  Filament       Intermediate filament protein
      0.096   12.9   1.4         12    6.2   0.1    2.4  2  Lge1           Transcriptional regulatory protein LGE1
       0.11   12.8   4.7       0.15   12.4   1.3    2.2  2  CLZ            C-terminal leucine zipper domain of cyclic nuc
       0.16   12.2   4.7       0.39   11.0   0.2    2.2  2  Seryl_tRNA_N   Seryl-tRNA synthetase N-terminal domain
       0.27   11.0   5.9        3.5    7.4   0.6    2.1  2  KASH_CCD       Coiled-coil region of CCDC155 or KASH
       0.67   10.2   5.2        3.3    7.9   0.4    2.1  2  Jnk-SapK_ap_N  JNK_SAPK-associated protein-1
       0.98    9.7   4.4        1.5    9.1   1.1    2.1  2  Spc24          Spc24 subunit of Ndc80
        1.1    9.1   6.5          8    6.3   0.7    2.6  3  DivIC          Septum formation initiator
        2.1    9.1   6.6        1.7    9.4   2.1    2.1  2  Occludin_ELL   Occludin homology domain
        2.1    8.5   9.6         31    4.7   9.6    2.1  1  ATG16          Autophagy protein 16 (ATG16)
        9.3    6.9   6.5        2.8    8.6   0.7    2.2  2  MerR-DNA-bind  MerR, DNA binding


Domain annotation for each model (and alignments):
>> JAKMIP_CC3  JAKMIP CC3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.3   4.3e-07   0.00064      53     176 ..      38     214 ..       9     224 .. 0.85

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 4.3e-07
  JAKMIP_CC3  53 spatpdekglkdeqvaeeeselrfrqLlaeyqalqrayalLreklggeldaerelkareqleselrktkskikdLeeaLaqk................. 134
                  p t d  g     ++++++ +  +  ++ y  +q++ya+L +     l+ +r + ++      + +  s +++Le++ ++k                 
  EPX74201.1  38 EPLTTDALGRWTAWFNKKQTRMFHEAFVNAYIDMQQKYAELESLQRKILNLQRIIAEKK---DFTVQSSSSVSNLEHTQEKKgffrkkpkcsssasssv 133
                 5667777777778888999999999999***************9999999999999888...445677888999****9999***************** PP

  JAKMIP_CC3 135 .......................................GqdskwveekQalikrnqeLvekikkleeeeskLkqeiqdlr 176
                                                         + s   ee+ ++   +q L  +++ l+ +  +L+++i++++
  EPX74201.1 134 ssgfftptldarnpalsrevalnfssipysacsaasspvSNVSSTAEEQDIINTSHQSLESQVNLLRGKAAQLEEQIKASQ 214
                 **************************************77777777777777778888*******************9876 PP

>> Filament  Intermediate filament protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.3    0.0084        13     207     262 ..      53     108 ..      43     122 .. 0.62
   2 ?    8.7   0.2   0.00077       1.1     204     258 ..     168     222 ..     150     227 .. 0.66

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0084
                 XXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Filament 207 nsealrsakeeitelrrqiqsleieleslkkqkasleaqlaeleerleaeleklqe 262
                 n+++ r  +e   ++   +q++ +elesl+ +  +l++ +ae ++   +  +++ +
  EPX74201.1  53 NKKQTRMFHEAFVNAYIDMQQKYAELESLQRKILNLQRIIAEKKDFTVQSSSSVSN 108
                 45555556666666666677777777777777777777777766655444444433 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00077
                 XXXXXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Filament 204 aeknsealrsakeeitelrrqiqsleieleslkkqkasleaqlaeleerleaele 258
                 a++  ++++s+ ee   ++ + qsle++++ l++++a+le+q++  + ++++ l+
  EPX74201.1 168 ASSPVSNVSSTAEEQDIINTSHQSLESQVNLLRGKAAQLEEQIKASQTNMHKLLR 222
                 5555566666666666677777777777777777777777777666666555444 PP

>> Lge1  Transcriptional regulatory protein LGE1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.1    0.0077        12      17      36 ..      70      89 ..      51      95 .. 0.84
   2 ?    5.3   0.2     0.015        22      16      53 ..     173     210 ..     158     215 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0077
        Lge1 17 kiesklkeiesldkqleelk 36
                 +++k+ e+esl++++ +l+
  EPX74201.1 70 DMQQKYAELESLQRKILNLQ 89
                6789************9987 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.015
        Lge1  16 kkiesklkeiesldkqleelklkvlkleleldlleeqi 53 
                 +  +s+++e++ ++   + l+ +v  l    ++leeqi
  EPX74201.1 173 SNVSSTAEEQDIINTSHQSLESQVNLLRGKAAQLEEQI 210
                 567999******************************98 PP

>> CLZ  C-terminal leucine zipper domain of cyclic nucleotide-gated channels
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.1      0.32   4.7e+02      38      59 ..      76     100 ..      65     112 .. 0.59
   2 ?   12.4   1.3    0.0001      0.15      22      63 ..     178     219 ..     173     223 .. 0.88

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.32
         CLZ  38 ssLeaLqtr...larLlaeyessqr 59 
                 ++Le+Lq +   l+r++ae +    
  EPX74201.1  76 AELESLQRKilnLQRIIAEKKDFTV 100
                 4566666653334566666665555 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 0.0001
         CLZ  22 agaeqkeleekverLessLeaLqtrlarLlaeyessqrkLkq 63 
                   +eq+ +++  ++Les+++ L  + a+L ++ ++sq+ + +
  EPX74201.1 178 TAEEQDIINTSHQSLESQVNLLRGKAAQLEEQIKASQTNMHK 219
                 457889999999**************************9975 PP

>> Seryl_tRNA_N  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.6     0.082   1.2e+02      30      65 ..      63      98 ..      51     116 .. 0.76
   2 ?   11.0   0.2   0.00026      0.39      68     108 .]     188     228 ..     172     228 .. 0.88

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.082
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCT CS
  Seryl_tRNA_N 30 elleldekrrelqveleelqaerNelskeIgkakkk 65
                  +++ ++  +++  +ele+lq++  +l++ I+++k+ 
    EPX74201.1 63 AFVNAYIDMQQKYAELESLQRKILNLQRIIAEKKDF 98
                  566666777788889999999999999999999975 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00026
                   -TCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCTS---- CS
  Seryl_tRNA_N  68 daeeliaevkelkeelkaleaelkeleaeleklllaiPNip 108
                     ++l  +v+ l  + ++le++ k+ +++++kll++ PN p
    EPX74201.1 188 SHQSLESQVNLLRGKAAQLEEQIKASQTNMHKLLRTYPNSP 228
                   56889999*******************************76 PP

>> KASH_CCD  Coiled-coil region of CCDC155 or KASH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.5     0.005       7.5     130     168 ..      76     114 ..      55     118 .. 0.86
   2 ?    7.4   0.6    0.0023       3.5      93     130 ..     185     222 ..     172     225 .. 0.76

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.005
    KASH_CCD 130 kekaeLkkqlheleellaekealleektkqieeLkltie 168
                 +e ++L++++ +l++++aek  + +++   + +L+ t+e
  EPX74201.1  76 AELESLQRKILNLQRIIAEKKDFTVQSSSSVSNLEHTQE 114
                 344689**************************9998876 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0023
    KASH_CCD  93 lekenqsLiakiesLqeenikllaekdelkkklkeLlk 130
                 ++  +qsL+++++ L  +  +l  ++ ++++ +++Ll+
  EPX74201.1 185 INTSHQSLESQVNLLRGKAAQLEEQIKASQTNMHKLLR 222
                 55678899999999999999999988888888888875 PP

>> Jnk-SapK_ap_N  JNK_SAPK-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.6     0.026        39      42      89 ..      68     115 ..      62     122 .. 0.84
   2 ?    7.9   0.4    0.0022       3.3      96     147 ..     173     224 ..     162     227 .. 0.73

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.026
  Jnk-SapK_ap_N  42 asrneeeeaeleelreeleqLeteyerekelrkraeeeleeiedqwee 89 
                    + + +++ aele l++++ +L+    ++k +  ++   + ++e + e+
     EPX74201.1  68 YIDMQQKYAELESLQRKILNLQRIIAEKKDFTVQSSSSVSNLEHTQEK 115
                    667788999999999999999999999999999999999998887665 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0022
  Jnk-SapK_ap_N  96 ekveqleeenrelelkaknaadqlsrleekeaelkkeysklheretellkkl 147
                    + v+++ ee++ +++  ++++ q++ l  k a+l+++ ++ +++ ++ll+++
     EPX74201.1 173 SNVSSTAEEQDIINTSHQSLESQVNLLRGKAAQLEEQIKASQTNMHKLLRTY 224
                    5667777777777777777777777777777777777777777777777766 PP

>> Spc24  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.1      0.24   3.7e+02      22      46 ..      73      97 ..      57     119 .. 0.63
   2 ?    9.1   1.1   0.00099       1.5       8      48 ..     177     217 ..     173     225 .. 0.83

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.24
       Spc24 22 sleselaelkeeleeleeeseekes 46
                +  +el++l++++ +l++   ek++
  EPX74201.1 73 QKYAELESLQRKILNLQRIIAEKKD 97
                4445666666666666665555333 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00099
       Spc24   8 riakelsdleselesleselaelkeeleeleeeseekeser 48 
                 ++a+e + ++++ +sles+ + l+ + ++lee+ +++++++
  EPX74201.1 177 STAEEQDIINTSHQSLESQVNLLRGKAAQLEEQIKASQTNM 217
                 57888999999999999999999999999999999855544 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.7    0.0053         8      13      44 ..      65      96 ..      63     114 .. 0.70
   2 ?   -3.2   0.0       4.9   7.3e+03      36      49 ..     142     155 ..     141     156 .. 0.82
   3 ?    5.5   0.3    0.0094        14      33      62 ..     182     211 ..     173     220 .. 0.74

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0053
                XXXXXHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       DivIC 13 kkgllaykqlkqeiaalqaelaklkaeneeLe 44
                ++ + +++q+ +e++ lq+++ +l+  ++e +
  EPX74201.1 65 VNAYIDMQQKYAELESLQRKILNLQRIIAEKK 96
                56677888888888888888888887776654 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 4.9
                 HHHHHHHHHHHHCC CS
       DivIC  36 lkaeneeLeaevkd 49 
                 l a+n +L +ev++
  EPX74201.1 142 LDARNPALSREVAL 155
                 78999999999975 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.0094
                 HHHHHHHHHHHHHHHCC-XXXXXXXXXXXX CS
       DivIC  33 laklkaeneeLeaevkdLksdedyieerAR 62 
                  + ++   ++Le++v++L+   + +ee+ +
  EPX74201.1 182 QDIINTSHQSLESQVNLLRGKAAQLEEQIK 211
                 555667778999999999878888888877 PP

>> Occludin_ELL  Occludin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   2.1    0.0011       1.7       7      82 ..      54     125 ..      51     127 .. 0.83
   2 ?    1.6   0.2      0.31   4.6e+02      25      53 ..     190     218 ..     177     226 .. 0.64

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0011
  Occludin_ELL   7 aeqrerYkaeFnkeYkeYkelhaeleevskkfseLerelkelkegskeykkieeeilqeykklkkdpeyqekkkrc 82 
                   ++q + + + F + Y   ++ +aele++++k+ +L+r + e k+ + + ++ ++    ++++ ++++ + +kk +c
    EPX74201.1  54 KKQTRMFHEAFVNAYIDMQQKYAELESLQRKILNLQRIIAEKKDFTVQSSSSVS----NLEHTQEKKGFFRKKPKC 125
                   789999******************************999987666655555544....488888888999999888 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.31
  Occludin_ELL  25 kelhaeleevskkfseLerelkelkegsk 53 
                   ++l+++++ ++ k ++Le+++k+++++ +
    EPX74201.1 190 QSLESQVNLLRGKAAQLEEQIKASQTNMH 218
                   45555666666666666666666655544 PP

>> ATG16  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   9.6     0.021        31      12     130 ..      55     222 ..      53     225 .. 0.77

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.021
       ATG16  12 rqekafa.eliqaynrLldrtsaleaenaklekaaasaks.....sksskksakekeasasq..................................... 67 
                 +q+ +f+ ++++ay ++ ++ ++le+ ++k+ +      +      +ss+++++ + +++++                                     
  EPX74201.1  55 KQTRMFHeAFVNAYIDMQQKYAELESLQRKILNLQRIIAEkkdftVQSSSSVSNLEHTQEKKgffrkkpkcsssasssvssgfftptldarnpalsrev 153
                 555555427899999999999999998887644332222244577344444444444444446889999999999999999999999999999999999 PP

       ATG16  68 ......snskqsakiqsleqklaqlreelaelyksrgelaqrllelneelqkleeklkedeerlaelea 130
                          +  +  +s+ ++++++ ee+     s++ l+++++ l  + ++lee++k+ ++++++l +
  EPX74201.1 154 alnfssIPYSACSAASSPVSNVSSTAEEQDIINTSHQSLESQVNLLRGKAAQLEEQIKASQTNMHKLLR 222
                 999974334455667788999*******************************************99976 PP

>> MerR-DNA-bind  MerR, DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.6      0.38   5.7e+02      45      60 ..      78      93 ..      70      97 .. 0.66
   2 ?    8.6   0.7    0.0018       2.8      39      63 ..     197     221 ..     179     223 .. 0.79

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.38
                   HHHHHHHHHHHHHHHH CS
  MerR-DNA-bind 45 laeleeriaeLqalra 60
                   l++l+++i  Lq++ a
     EPX74201.1 78 LESLQRKILNLQRIIA 93
                   5666677777766655 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0018
                    HHHHHHHHHHHHHHHHHHHHHHHHH CS
  MerR-DNA-bind  39 allarklaeleeriaeLqalraeLa 63 
                    +ll+ k+a+lee+i++ q  +  L 
     EPX74201.1 197 NLLRGKAAQLEEQIKASQTNMHKLL 221
                    79*************9999888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (235 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1381  (0.077026); expected 358.6 (0.02)
Passed bias filter:                      656  (0.0365888); expected 358.6 (0.02)
Passed Vit filter:                        81  (0.00451782); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.52u 0.29s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 1557.03
//
Query:       EPX74202.1  [L=232]
Description: hypothetical protein SOCG_03414 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00033   19.3   0.0    0.00044   18.9   0.0    1.1  1  LEF-9     Late expression factor 9 (LEF-9)


Domain annotation for each model (and alignments):
>> LEF-9  Late expression factor 9 (LEF-9)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   2.5e-08   0.00044     126     183 ..      33      92 ..      25     104 .. 0.84

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 2.5e-08
       LEF-9 126 nylvflnkkfnskkennlvdvsgalqkikltq.gvikdllqskngyavqyly.stflnta 183
                 +y  +++++++sk  + l+++sga+q ++l++ gv   +l +k  +a   l  s+fln +
  EPX74202.1  33 QYQSIFKHSMESKPFQCLMNLSGAMQCVPLSHmGVNDHRLSNKASFAITTLTsSSFLNVS 92 
                 56666778899*******************995677778********9998725799987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       416  (0.0232026); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1660.97
//
Query:       EPX74203.1  [L=372]
Description: GTPase activating protein Gyp10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-26   92.2   4.3    5.6e-26   91.5   4.3    1.3  1  RabGAP-TBC  Rab-GTPase-TBC domain


Domain annotation for each model (and alignments):
>> RabGAP-TBC  Rab-GTPase-TBC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.5   4.3   3.1e-30   5.6e-26       2     214 ..      39     239 ..      38     240 .. 0.89

  Alignments for each domain:
  == domain 1  score: 91.5 bits;  conditional E-value: 3.1e-30
  RabGAP-TBC   2 elRgevWklllgyepevkrlkksekkqeksekeksklekseeskelsqIkkDvprtfpes..esfknkqgqnqLeriLkaysiynpevgYcqGmndiva 98 
                 ++R+ +W ll+g++p            ++++++  k   +++  ++ q+ +D +r+f +   +    ++ ++qL ++L+++ ++ pe+ Y qG++di++
  EPX74203.1  39 SFRKPAWTLLCGISP------------RDRMECLAKSAVQSSYADQVQVLLDSERSFFQYrlNPILLRKYRSQLIKLLSTLFKRYPELCYYQGLHDIAQ 125
                 6899*********87............77888888888888888899***********335677788899***************************** PP

  RabGAP-TBC  99 plllvsldeeeaFwcfvsLlekyklrdlytsslpglkrklkvleellkkkdpklykhlkeegldlelfaikwfltlflrefpl.etvlrlwDlllegek 196
                 + l ++ + ++a  ++  L+  ++lrd++ ++l+ + ++l+++ e+++++d  ly++lk+ +++++ fa++w++t+f+++++  ++v rl+D+++  + 
  EPX74203.1 126 IVL-LTVPYSHALPLMEYLM-FHRLRDFMLPTLDATIKQLHLVLEIIRYRDFTLYEYLKKADVQCY-FALSWLITWFAHDISDiSVVGRLFDFFISSHP 221
                 ***.8889999*********.9*************999**********************999665.9**********887655********9996665 PP

  RabGAP-TBC 197 fvllrvalailklleeel 214
                   ++++++ i+   ++++
  EPX74203.1 222 SAVVYTCAQIVIDDRKKI 239
                 659999998876666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (372 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       478  (0.0266607); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2600.58
//
Query:       EPX74204.1  [L=275]
Description: bis(5'-adenosyl)-triphosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.3e-51  175.5   0.0    1.5e-51  175.3   0.0    1.0  1  CN_hydrolase  Carbon-nitrogen hydrolase


Domain annotation for each model (and alignments):
>> CN_hydrolase  Carbon-nitrogen hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.3   0.0   8.2e-56   1.5e-51       1     260 [.       3     260 ..       3     261 .. 0.95

  Alignments for each domain:
  == domain 1  score: 175.3 bits;  conditional E-value: 8.2e-56
                   EEEEEEBB-STTHHHHHHHHHHHHHHHHHHTTESEEEEETTTTTBSSSHHHHHHHHB.HSSSHHHHHHHHHHHHHTEEEEEEEEEEECCTTEEEEEE CS
  CN_hydrolase   1 rvAvvQlpqkaadleanlqklleliaeAarkgadLivlPElfitgykeeahfleaAe.aglgetlallaalarkngiavvigliereltngklqayn 96 
                   ++Av+Q+++ ++++ +n + +++li eAa+kga+ +++PE+++++ +++ + le++     ++++++++a a+++ i v ig+ e    ++kl  +n
    EPX74204.1   3 LAAVAQITS-TSNILKNAKICKDLIGEAASKGAKCVFFPEASDYIAQNSSEALELSChPDCSAFVKQICAEAKQHSICVQIGVHEPSPIENKL--LN 96 
                   69*******.79**********************************999999999996334799**********************8899999..** PP

                   EEEEEETTSEEEEEEE-SS--E.ECTTSCECCGHHTSCS-SS.S-EEEETTEEEEEEEGGGGGSHHHHHHHHHTT-SEEEEBH.GCCCTCHHHHHHH CS
  CN_hydrolase  97 tavlldldgklvgkyrKlhLfp.geprpptaverelfepgdg.ipvfdtpvgkiGaaiCyeigfpellralalkgaeilvnlserapvpksmgppqw 191
                   + +l+++d+ +v++y+K hLf+ +++++p   e+    pg++ +p+f t++gk+G aiC + +fpe +++l+  ga+i+++    + +++++g+++w
    EPX74204.1  97 SSLLIEPDKGIVQRYSKAHLFDvDIANGPVLKESNSTVPGNAiVPPFLTSLGKVGSAICFDLRFPEHALKLRNLGADIITYP---SAFTQKTGAAHW 190
                   *******************************************************************************993...57999******* PP

                   HHHHHHHHHHHTSEEEEEEBEEEHCETTEEEE--EEEE-TTS-EEEECCSSS..TEEEEEEEEHHHHHHHH CS
  CN_hydrolase 192 ellgraralengcfviaanqvggyeqlilwpvghSaiidpdGrilaglgeee..egvliaeidladvratr 260
                   e+l raral+++ ++ a +q g  +++++ ++gh++i+dp+G+++a+ +  +   g++ a++dl++v+ +r
    EPX74204.1 191 EVLLRARALDAQSYIFAPAQGGS-HNEKRASYGHAMIVDPWGTVVAQYSDLAspNGLIFADVDLNLVQHVR 260
                   ***********************.************************76541156***********9988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (275 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       286  (0.0159518); expected 358.6 (0.02)
Passed bias filter:                      252  (0.0140554); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 2027.48
//
Query:       EPX74205.1  [L=642]
Description: GTP binding protein Nog1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.5e-51  172.3   0.4      2e-50  170.9   0.4    1.8  1  NOG1_N       NOG1 N-terminal helical domain
    1.2e-25   89.3   0.1    1.2e-25   89.3   0.1    1.8  2  NOGCT        NOGCT (NUC087) domain
    4.8e-25   87.1   0.1    9.9e-25   86.1   0.1    1.6  1  NOG1         Nucleolar GTP-binding protein 1 (NOG1)
    1.1e-16   60.9   0.0    2.4e-16   59.8   0.0    1.6  1  MMR_HSR1     50S ribosome-binding GTPase
    2.9e-09   36.6   0.1      6e-09   35.6   0.1    1.5  1  FeoB_N       Ferrous iron transport protein B
    0.00027   21.1   0.2       0.75    9.8   0.0    2.9  3  Dynamin_N    Dynamin family
     0.0055   16.6   0.1        1.2    9.0   0.0    3.0  2  RsgA_GTPase  RsgA GTPase
  ------ inclusion threshold ------
      0.015   14.6   1.9      0.017   14.4   0.0    2.1  3  AIG1         AIG1 family
        0.1   13.0   0.6       0.84   10.0   0.0    2.8  3  AAA_16       AAA ATPase domain


Domain annotation for each model (and alignments):
>> NOG1_N  NOG1 N-terminal helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  170.9   0.4     1e-53     2e-50       1     160 []       6     165 ..       6     165 .. 1.00

  Alignments for each domain:
  == domain 1  score: 170.9 bits;  conditional E-value: 1e-53
      NOG1_N   1 FekiptvptseelidkalrrakraakttkkkkneikrlrnlearkvrtasntlsdkLeeivkkfPnldelhpFyrelldvlvdkdelkksLaqvkwark 99 
                 F++i  +p+++ ++d  l+r++r+++t+ +++ +i+r+r ++ rkv+++++t  +kL +i+++fP+ld++hpF+ +ll++l+d+d+lk++L+q+++a++
  EPX74205.1   6 FKNISPIPDVNTFLDVVLSRTQRKTPTVIRSGFKISRIRGFYGRKVKFTQDTCTEKLDAILQEFPRLDDIHPFHADLLNILYDRDHLKIALSQLSTAKH 104
                 9************************************************************************************************** PP

      NOG1_N 100 lirkigkeyvnklkkaddkkeakelrreafgrvasvlkkvdkaldfLedvrkkLrkLpaiD 160
                 li++++++y+++lk++d++ ++k+l+r+a+gr+a+++k+ + +l+fLe+vr+++ +Lp+iD
  EPX74205.1 105 LIENVARDYIRLLKYGDSLYRCKQLKRAALGRMATIIKRQKSSLEFLEQVRQHMSRLPSID 165
                 ************************************************************9 PP

>> NOGCT  NOGCT (NUC087) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.3   0.1   5.9e-29   1.2e-25       1      54 []     396     449 ..     396     449 .. 0.98
   2 ?   -3.3   0.7       4.8   9.6e+03       6      20 ..     458     472 ..     455     474 .. 0.72

  Alignments for each domain:
  == domain 1  score: 89.3 bits;  conditional E-value: 5.9e-29
       NOGCT   1 rklerdleeenggagvYsvdlkkkYllkndewkyDiiPEildGkNvaDFidpdI 54 
                 r l+rd+e++nggagv++v+l++kYll n+ewkyD iPE+ldGkNvaD++dp+I
  EPX74205.1 396 RILARDIEAANGGAGVFNVNLRDKYLLSNPEWKYDRIPELLDGKNVADYVDPEI 449
                 5799*************************************************9 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 4.8
       NOGCT   6 dleeenggagvYsvd 20 
                 + ee+ ++ g Y+ d
  EPX74205.1 458 EEEERLENEGYYNSD 472
                 556667888899987 PP

>> NOG1  Nucleolar GTP-binding protein 1 (NOG1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.1   0.1     5e-28   9.9e-25       1      58 []     235     292 ..     235     292 .. 0.99

  Alignments for each domain:
  == domain 1  score: 86.1 bits;  conditional E-value: 5e-28
        NOG1   1 eIEkqAiaALkhladavlFllDpseecgysleeQlsLleeikelfankpvivvlnKiD 58 
                 +IE+q+i+A++hl++avl+++D+se cgys++ Q++L+++ik+lfank  + v+nK+D
  EPX74205.1 235 TIEMQSITAMAHLRSAVLYFMDLSEMCGYSIAAQVKLYHSIKPLFANKLTLLVVNKVD 292
                 6********************************************************9 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.8   0.0   1.2e-19   2.4e-16       3     114 .]     172     290 ..     170     290 .. 0.69

  Alignments for each domain:
  == domain 1  score: 59.8 bits;  conditional E-value: 1.2e-19
                 EEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSS....HHHHHHHHHHHHHHHHCTSEEEEEEETTTT..CSHHHHH CS
    MMR_HSR1   3 aivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvklkgkeielvDtpGlie....gaseekglgkaflaleeadlillvvdasee..klkplde 95 
                 ++ G+pNvGKS+++n++t++++ v+ +++tT+    g++++k  +++++DtpG+++    + ++ ++ + +  a+ + +++l+ +d+s e  +++    
  EPX74205.1 172 LVCGYPNVGKSSFMNKITRAEVDVQPYAFTTKSLFVGHFDYKYLRWQVIDTPGILDhpleQMNTIEMQSITAMAHLR-SAVLYFMDLS-EmcGYSI-AA 267
                 689*************************************999**********874332222222234444444555.8999999988.3233322.23 PP

                 HHHHHHHH....TTSEEEEEEES CS
    MMR_HSR1  96 eleellee....akkplilvlnk 114
                 +++ + +     a+k ++lv+nk
  EPX74205.1 268 QVKLYHSIkplfANKLTLLVVNK 290
                 33333211345566667777776 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.6   0.1     3e-12     6e-09       3     153 ..     171     333 ..     169     336 .. 0.71

  Alignments for each domain:
  == domain 1  score: 35.6 bits;  conditional E-value: 3e-12
                 EEEEESTTSSHHHHHHHHHTTSEEEEESTTSSSEEEEEEEEETTEEEEEEE----..SSSSSSSHHHHHHHHHHHCTSSSEEEEEEE.......GGGHH CS
      FeoB_N   3 valvGnpnvGkttlfnaltgakqkvgNwpGvtvekkegklklkgkeveivDlPGi..Yslsayseeekvardflleeepdvvvnvvd.......atnle 92 
                 + ++G pnvGk++++n++t a+ +v  ++ +t     g++++k  + +++D PGi  + l+++++ e  + + +++    +v+  +d       +   +
  EPX74205.1 171 LLVCGYPNVGKSSFMNKITRAEVDVQPYAFTTKSLFVGHFDYKYLRWQVIDTPGIldHPLEQMNTIEMQSITAMAHL-RSAVLYFMDlsemcgySIAAQ 268
                 6789***************************************************4444655544443333333322.234444444111221133345 PP

                 HHHHHHHHHHHTTSSEEEEEETHHHHHHTTEEE-HHHHHHHH....TS-EEEEBTTTTBTHHHHH CS
      FeoB_N  93 rnLyLtlqllelgvpvvlalnmideaekkgieidlkkLsekL....gvpvvktsakkkegieell 153
                  +Ly  ++ l  ++ ++l++n++d ++ + ++ + +++ +++    +v++v+ts  +  g+ +++
  EPX74205.1 269 VKLYHSIKPLFANKLTLLVVNKVDIVRPEDLDPESQEMIQSIladgNVQMVQTSCVSDMGVMDVR 333
                 56666777777788899999999999999999888887665435545888888888888777665 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0   0.00038      0.75       2      32 ..     172     202 ..     171     211 .. 0.81
   2 !    8.1   0.0    0.0013       2.5     104     167 ..     218     290 ..     209     291 .. 0.80
   3 ?   -3.9   0.0       6.4   1.3e+04      59      82 ..     594     617 ..     576     625 .. 0.57

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00038
                 EEEEBTTTTHHHHHHHHHTS--S---SSS-- CS
   Dynamin_N   2 avvGsqSsGKSSvlnaLlgedilprgpnptT 32 
                 +v+G  + GKSS++n+++++++ +     tT
  EPX74205.1 172 LVCGYPNVGKSSFMNKITRAEVDVQPYAFTT 202
                 799***************9998665555555 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.0013
                 EEEE---B-SSSGTTS.....HHHHHHHSTTEEEEEEEETTS..-CCC-CHHHHHHHHSTTBTT..EEEEEE- CS
   Dynamin_N 104 tlvDlPGldsvnkrdq.....elvkeyikkadiilavtsanh..dlsnsealflarevdpkgkr..tivvltk 167
                  ++D+PG+ + + +++     + ++ +++ ++++l+ ++ +     s + + +l ++++p   +  t+ v++k
  EPX74205.1 218 QVIDTPGILDHPLEQMntiemQSITAMAHLRSAVLYFMDLSEmcGYSIAAQVKLYHSIKPLFANklTLLVVNK 290
                 68********999888778766666667999******999984455777888999999999888888999888 PP

  == domain 3  score: -3.9 bits;  conditional E-value: 6.4
                 T-EB--CHHHHHHHHHHHHHHHTS CS
   Dynamin_N  59 ekkledfsevreeieketekiaga 82 
                 ++  e +++v++ +++++++++++
  EPX74205.1 594 RSYAERLNRVKQVQRNRMARASES 617
                 455555566666666665555544 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.0    0.0006       1.2      99     128 ..     167     196 ..     130     230 .. 0.67
   2 ?    3.9   0.0     0.022        44      50      96 ..     285     335 ..     278     342 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.0006
                  T.SEEEEECSTTSSHHHHHHHHCTT-----S CS
  RsgA_GTPase  99 d.ktsvlvGqSGvGKStLinallpelelktg 128
                  + +t +++G   vGKS+++n+++   e+ ++
   EPX74205.1 167 NtRTLLVCGYPNVGKSSFMNKITRA-EVDVQ 196
                  4489999***************985.44443 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.022
                  EEEEE-GGG--HHH....HHHHHHHHHHHTTSEEEE--TTTHTTHHHHHHH CS
  RsgA_GTPase  50 vivlnKiDlleeee....eleelkeelealgyevllvsaktkegleelkel 96 
                  ++v+nK+D++  e+    + e +++ l++ +++++ +s  +  g+ +++++
   EPX74205.1 285 LLVVNKVDIVRPEDldpeSQEMIQSILADGNVQMVQTSCVSDMGVMDVRNN 335
                  789********999999778888899999999*999999999888888765 PP

>> AIG1  AIG1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.1       3.3   6.5e+03     151     182 ..     131     162 ..     125     165 .. 0.72
   2 ?   14.4   0.0   8.6e-06     0.017       2     114 ..     170     282 ..     169     335 .. 0.71
   3 ?   -3.0   0.1       1.8   3.7e+03     130     188 ..     437     494 ..     433     505 .. 0.52

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 3.3
                 HHTTTSEEEEETTHHHHHHHHHHHHHHHHHHH CS
        AIG1 151 kecgnRvvlfnnktaskeekeeQvkellelve 182
                 ++  +R+  +  +++s+ e  eQv++ ++   
  EPX74205.1 131 RAALGRMATIIKRQKSSLEFLEQVRQHMSRLP 162
                 55567888888888899999999988877655 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 8.6e-06
                 EEEEESSTTSSHHHHHHHHHTS--SS--TTTS---SS-EEEEE.EETTEEEEEEE--SCCCTTCCHHCHHHHHHHHHHHCTT-ESEEEEEEETTB-S.. CS
        AIG1   2 tivlvGktgnGkSaTgNsilgkkaFesklsaqsvtkkcqkksr.twdgkkinViDTPglfdlsvsadkiskeivrclllseegihalllvlslgrft.. 97 
                 t+++ G   +GkS+  N i + ++        + t+k+  +     +  + +ViDTPg++d   ++ ++++  +++++  ++   a+l+ ++l+++   
  EPX74205.1 170 TLLVCGYPNVGKSSFMNKITRAEVDVQP---YAFTTKSLFVGHfDYKYLRWQVIDTPGILDHPLEQMNTIE--MQSITAMAHLRSAVLYFMDLSEMCgy 263
                 89999**************999884433...344444444444488889999*********9876665555..44556666667788888877644211 PP

                 ..HHHHHHHHHHHHHHCGG CS
        AIG1  98 ..eedekalktlkelFGek 114
                   +   k+ + +k lF +k
  EPX74205.1 264 siAAQVKLYHSIKPLFANK 282
                 1134455555566666555 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 1.8
                 TTCCHHHHHHHHH-HHHHHHHHHTTTSEEEEETTHHHHHHHHHHHHHHHHHHHHHHHHT CS
        AIG1 130 eddsledylsksspeaLkevlkecgnRvvlfnnktaskeekeeQvkellelveaivken 188
                  ++++ dy+  +   +L  + +  ++R     + ++++e  +e  + +l++ e+++++n
  EPX74205.1 437 DGKNVADYVDPEIEAKLAAMDE-EEERLENEGYYNSDEEVVDEDEERVLSTAEKLREKN 494
                 4455566666555554444333.334433333334455555555556666666666555 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   0.00042      0.84       9      47 ..     151     191 ..     149     218 .. 0.82
   2 ?   -1.9   0.1       1.9   3.7e+03      83      83 ..     522     522 ..     429     623 .. 0.61
   3 ?   -1.2   0.2       1.1   2.3e+03      29      38 ..     630     639 ..     602     640 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00042
      AAA_16   9 leqLlsalervrsgrp..elvllsGesGvGKsslvrellra 47 
                 leq+++ ++r+ s +p  + +l+ G++ vGKss ++++ ra
  EPX74205.1 151 LEQVRQHMSRLPSIDPntRTLLVCGYPNVGKSSFMNKITRA 191
                 577888888777777777*****************999964 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.9
      AAA_16  83 r 83 
                  
  EPX74205.1 522 D 522
                 1 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 1.1
      AAA_16  29 lsGesGvGKs 38 
                  sG +G+GK+
  EPX74205.1 630 YSGKRGMGKT 639
                 589******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (642 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       941  (0.0524848); expected 358.6 (0.02)
Passed bias filter:                      578  (0.0322383); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.68u 0.26s 00:00:00.94 Elapsed: 00:00:00.43
# Mc/sec: 4436.47
//
Query:       EPX74206.1  [L=200]
Description: RNA polymerase I transcription factor subunit Rrn11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-37  129.4   0.1    1.5e-37  129.0   0.1    1.1  1  RNA_pol_I_TF  RNA polymerase I specific initiation factor
    0.00067   19.2   0.2    0.00096   18.7   0.2    1.2  1  TAF1_subA     TAF RNA Polymerase I subunit A


Domain annotation for each model (and alignments):
>> RNA_pol_I_TF  RNA polymerase I specific initiation factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.0   0.1   1.7e-41   1.5e-37       1     197 [.       1     176 [.       1     177 [. 0.95

  Alignments for each domain:
  == domain 1  score: 129.0 bits;  conditional E-value: 1.7e-41
  RNA_pol_I_TF   1 veknldssekkakanflikskglevlpdskseirsyktkhienltqllhlnilrrnwklAykiFslLiRlpevdirsiWplGveiLekleeetssek 97 
                   ++ +++ ++k+++ +  + ++    +p+++   ++ ktkhi++l++l+hl++lr++++ Ay++FslL+R + vd++++W++G+eiL++++ + s+ +
    EPX74206.1   1 MFDPCTVRNKRSTLQDIAPKESNTSVPKIPLPASRFKTKHIDALCSLMHLCLLREDYNRAYRAFSLLLRSKGVDMSKMWNIGLEILNQVRPDDST-E 96 
                   5778999999999999999999999999***************************************************************9999.* PP

  RNA_pol_I_TF  98 flewlssvysskkafnqstsrrslapvfrsGsrthtplyvitsLWkllikrkssssvldkleelidklselvLePPysedgelyfllalcklleaee 194
                   ++e+l++ ++++ + n ++   +++ +f        p+y++     lli+r+       +++++++ l+e++L+PP++++ +ly +++++++  a++
    EPX74206.1  97 YMERLIARFPANPNKNRTQRSLTSEQFF--------PAYIL-----LLIQRQ-------EYQRAMNSLDEYMLSPPFNQNKALYEYSGMLCFELAKN 173
                   **************99999999999999........*****.....999999.......6*********************************9998 PP

  RNA_pol_I_TF 195 lss 197
                    ss
    EPX74206.1 174 ESS 176
                   775 PP

>> TAF1_subA  TAF RNA Polymerase I subunit A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.2   1.1e-07   0.00096       7     125 ..      56     175 ..      51     194 .. 0.74

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 1.1e-07
   TAF1_subA   7 qWqeAAevlsvllqgledekspkeareiiwkvgleilkhnhpkstqeiydvfmerlknlgvknykk..i.....slehalflllqgnieeakrnleelv 98 
                  +++A + +s ll+          + +++w +gleil++++p+ ++e ++ ++ r   +  kn+ +  +        ++l l+ +++ + a ++l e++
  EPX74206.1  56 DYNRAYRAFSLLLRSKGV------DMSKMWNIGLEILNQVRPDDSTEYMERLIARFPANPNKNRTQrsLtseqfFPAYILLLIQRQEYQRAMNSLDEYM 148
                 566666666666655544......55666********************************99999651445446677888888888999988888888 PP

   TAF1_subA  99 sqeklikeplvnlykGLlsYqkWyskl 125
                  +  + ++  +  y G+l++++  +++
  EPX74206.1 149 LSPPFNQNKALYEYSGMLCFELAKNES 175
                 878888777888888888887655544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       617  (0.0344135); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1497.25
//
Query:       EPX74207.1  [L=615]
Description: MBF transcription factor complex subunit Res1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-13   49.9   3.5      3e-05   24.5   0.1    4.8  5  Ank_4     Ankyrin repeats (many copies)
    3.3e-12   46.8   1.8    4.7e-06   27.1   0.1    2.8  2  Ank_2     Ankyrin repeats (3 copies)
    9.5e-08   32.2   1.6     0.0012   19.2   0.2    3.6  3  Ank       Ankyrin repeat
      1e-06   28.6   2.6     0.0016   18.8   0.1    4.1  3  Ank_3     Ankyrin repeat
    1.1e-05   25.2   0.1    0.00011   22.1   0.1    2.4  1  KilA-N    KilA-N domain
    2.9e-05   24.2   2.7      0.079   13.3   0.2    3.7  3  Ank_5     Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.31   9.4e+02      21      36 ..      10      24 ..       6      27 .. 0.85
   2 !   24.3   0.1   1.1e-08   3.3e-05      24      55 .]     223     254 ..     218     254 .. 0.95
   3 !   24.5   0.1     1e-08     3e-05       2      47 ..     235     280 ..     234     293 .. 0.86
   4 ?    4.3   0.0     0.022        65      16      43 ..     288     312 ..     282     326 .. 0.73
   5 !   16.5   0.1   3.2e-06    0.0097      26      54 ..     337     374 ..     310     375 .. 0.73

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.31
       Ank_4 21 lekgadinaqdnrsGe 36
                +++g++++++ n++G+
  EPX74207.1 10 IYSGVNVYEC-NINGN 24
                679******9.*9997 PP

  == domain 2  score: 24.3 bits;  conditional E-value: 1.1e-08
       Ank_4  24 gadinaqdnrsGetalhiAakrgnveilklLl 55 
                 ++d+na+++++G talh Aa +gn+e+ + Ll
  EPX74207.1 223 DWDVNASIDEDGHTALHWAAAMGNLEMMHALL 254
                 79**************************9997 PP

  == domain 3  score: 24.5 bits;  conditional E-value: 1e-08
       Ank_4   2 ltaLhyaaisgrlelvrlLlekgadinaqdnrsGetalhiAakrg.n 47 
                 +taLh+aa++g+le+ + Ll+  a++  + n  ++t l +++++  n
  EPX74207.1 235 HTALHWAAAMGNLEMMHALLQAEANVVSV-NYLQQTSLMRCVMFTmN 280
                 79******************988887666.777*********98655 PP

  == domain 4  score: 4.3 bits;  conditional E-value: 0.022
       Ank_4  16 lvrlLlekgadinaqdnrsGetalhiAa 43 
                 lv  Ll++   ++++ ++ G+t +h++a
  EPX74207.1 288 LVSELLQSA--LCMT-DNFGQTVFHHVA 312
                 555566542..4588.**********87 PP

  == domain 5  score: 16.5 bits;  conditional E-value: 3.2e-06
       Ank_4  26 d..........inaqdnrsGetalhiAakrgnveilklL 54 
                 +          +n q +++G+tal i+a++g +++++lL
  EPX74207.1 337 StqsvevatqiLNVQ-DDRGDTALLICARNGAKRCARLL 374
                 355555666668999.999*****************998 PP

>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.1   1.6e-09   4.7e-06      21      73 ..     225     293 ..     194     296 .. 0.69
   2 !   20.8   0.2   1.5e-07   0.00044       9      73 ..     285     375 ..     271     385 .. 0.65

  Alignments for each domain:
  == domain 1  score: 27.1 bits;  conditional E-value: 1.6e-09
       Ank_2  21 dpn.k...ngktaLhyAakngnleivklLleh......adndgrtpLhyAars..g....hleivklLl 73 
                 d+n +   +g+taLh+Aa  gnle++ +Ll++      +++  +t L+ ++ +  +     +e+v  Ll
  EPX74207.1 225 DVNaSideDGHTALHWAAAMGNLEMMHALLQAeanvvsVNYLQQTSLMRCVMFtmNydlqTFELVSELL 293
                 344524579*********************85656766668899*******995532222356666666 PP

  == domain 2  score: 20.8 bits;  conditional E-value: 1.5e-07
       Ank_2   9 nlelvklLl..egadpnkngktaLhyAak.ngnl...ei....vklLleh................adndgrtpLhyAarsghleivklLl 73 
                  +elv  Ll  + +  +++g+t+ h+ a  + ++   e+    + +Ll++                +d+ g t+L ++ar+g  ++++lL+
  EPX74207.1 285 TFELVSELLqsALCMTDNFGQTVFHHVALlASSKskmEAaryyMDILLQNltstqsvevatqilnvQDDRGDTALLICARNGAKRCARLLM 375
                 3478999995533333349******666623322212444555788887555666777777775555588********************8 PP

>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.2     4e-07    0.0012       1      27 [.     233     260 ..     233     265 .. 0.85
   2 ?    0.3   0.0      0.39   1.2e+03       4      32 .]     269     302 ..     268     302 .. 0.67
   3 !    9.0   0.1   0.00065       1.9       2      28 ..     355     382 ..     354     386 .. 0.79

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 4e-07
                 TSBBHHHHHHHHTTHHHHHHHH.TTTST CS
         Ank   1 dGnTPLHlAatngkkriiklLL.hGAnl 27 
                 dG+T+LH+Aa  g++++ ++LL   An+
  EPX74207.1 233 DGHTALHWAAAMGNLEMMHALLqAEANV 260
                 8********989**********435886 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.39
                 BHHHHHH.........HHTTHHHHHHHHTTTSTTCBTT CS
         Ank   4 TPLHlAa.........tngkkriiklLLhGAnlnaldn 32 
                 T L++++         t+   + +++LL++A l ++dn
  EPX74207.1 269 TSLMRCVmftmnydlqTF---ELVSELLQSA-LCMTDN 302
                 557775577654444444...599****998.888886 PP

  == domain 3  score: 9.0 bits;  conditional E-value: 0.00065
                 SBBHHHHHHHHTTHHHHHHHH.TTTSTT CS
         Ank   2 GnTPLHlAatngkkriiklLL.hGAnln 28 
                 G+T+L ++a+ng kr+++lL    A+ +
  EPX74207.1 355 GDTALLICARNGAKRCARLLMaFYACAT 382
                 9******9**999*****9975456655 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.1   5.2e-07    0.0016       1      28 [.     233     259 ..     233     261 .. 0.89
   2 ?    2.8   0.0     0.087   2.6e+02       2      15 ..     304     317 ..     303     335 .. 0.72
   3 ?    4.1   0.1     0.032        96       2      22 ..     355     375 ..     354     380 .. 0.81

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 5.2e-07
       Ank_3   1 nGetpLhlAarsgnleivkfLlenkgad 28 
                 +G t+Lh+Aa  gnle++++Ll+   a+
  EPX74207.1 233 DGHTALHWAAAMGNLEMMHALLQ-AEAN 259
                 699*******************9.5555 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.087
       Ank_3   2 GetpLhlAarsgnl 15 
                 G+t +h++a+ ++ 
  EPX74207.1 304 GQTVFHHVALLASS 317
                 9*****99988776 PP

  == domain 3  score: 4.1 bits;  conditional E-value: 0.032
       Ank_3   2 GetpLhlAarsgnleivkfLl 22 
                 G t+L ++ar+g    +++L 
  EPX74207.1 355 GDTALLICARNGAKRCARLLM 375
                 89**********998666665 PP

>> KilA-N  KilA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.1   3.6e-08   0.00011       7      95 ..      24      92 ..      20     105 .. 0.84

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 3.6e-08
      KilA-N  7 eiiirrvkdgyinatkllkaaaedtkriddWlrnkstkelleeleedynisekkksektisenrkakpgrlqGtYvhpdlalavasWis 95
                ++++ r++d + nat++lk+a+ d+ r +++l++   k l+e+++                       g++qGt+v+ d a+++a+  +
  EPX74207.1 24 NFLMKRCHDQWMNATQILKIAELDKPRRTRILEKFAQKGLHEKVQGGC--------------------GKYQGTWVPLDRAVELAQEYD 92
                6889999**************777788899999999999999999763....................679**************7554 PP

>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.2   2.6e-05     0.079      13      45 ..     231     261 ..     222     267 .. 0.79
   2 ?    3.1   0.0     0.043   1.3e+02       7      24 ..     295     312 ..     288     317 .. 0.80
   3 !    5.7   0.1    0.0062        19       9      52 ..     348     391 ..     344     395 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 2.6e-05
       Ank_5  13 dgggntpLhvAakygaadvvrlLlargadlnlt 45 
                 d++g t+Lh+Aa  g+++++  Ll  +a +n+ 
  EPX74207.1 231 DEDGHTALHWAAAMGNLEMMHALL--QAEANVV 261
                 45555*******************..7766665 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.043
       Ank_5   7 advnrldgggntpLhvAa 24 
                  +++ +d++g+t++h+ a
  EPX74207.1 295 SALCMTDNFGQTVFHHVA 312
                 667899*********987 PP

  == domain 3  score: 5.7 bits;  conditional E-value: 0.0062
       Ank_5   9 vnrldgggntpLhvAakygaadvvrlLlargadlnltdsrGlta 52 
                 +n +d +g t+L + a++ga +++rlL+a+ a +++ +++G+ +
  EPX74207.1 348 LNVQDDRGDTALLICARNGAKRCARLLMAFYACATIPNNQGQYP 391
                 57777888899999999999999999999999999999999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (615 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1074  (0.059903); expected 358.6 (0.02)
Passed bias filter:                      484  (0.0269954); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.62u 0.26s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 4279.28
//
Query:       EPX74208.1  [L=215]
Description: orotate phosphoribosyltransferase Ura5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-14   54.2   0.0    1.5e-14   53.8   0.0    1.2  1  Pribosyltran  Phosphoribosyl transferase domain
     0.0096   15.4   0.0      0.013   14.9   0.0    1.2  1  UPRTase       Uracil phosphoribosyltransferase


Domain annotation for each model (and alignments):
>> Pribosyltran  Phosphoribosyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.8   0.0   1.7e-18   1.5e-14       4     133 ..      38     163 ..      35     178 .. 0.87

  Alignments for each domain:
  == domain 1  score: 53.8 bits;  conditional E-value: 1.7e-18
                   HTTT---EEEEEEETTEEEEEE--GGGEEEEEEETTTHHHHHHHHHHS......TT-EE-EEEEEE-TTT--EE........EE----TTSEEEEE- CS
  Pribosyltran   4 ellenpaildavarlaaeileeyngkpdvvvgiargGvpfakiladeL......evplayvrkvkyrpdgseeaargssdesrlledpagkkVliVD 94 
                   +++++  +++ ++++a+ i++  n + dv++g+a++G+ +a i+a +L         +ay rk+ + ++ +++            ++ + ++Vl+ D
    EPX74208.1  38 NFTHGADLSALANSYAETIISM-NIEFDVLFGPAYKGISLAAITAAKLyektgkSYGFAYNRKEAKTHGEGGNL---------VGAEMERQRVLLLD 124
                   5667777888899999999999.*************************99986666677777777777777777.........68999********* PP

                   SEESSSHHHHHHHHHHHCC-BSEEEEEEEEE-HHHHHHH CS
  Pribosyltran  95 DildtGgTllaalelLkekgpeevriavlvdkpateeev 133
                   D+++ G+++++a+ +L+ k ++  +i+ l+d+ +++ + 
    EPX74208.1 125 DVITAGTAIREAISFLEPKHVQLAGIVLLLDRQERVDPA 163
                   ********************************9998765 PP

>> UPRTase  Uracil phosphoribosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   1.5e-06     0.013     117     157 ..     113     153 ..      91     169 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.5e-06
     UPRTase 117 kkiaertvlllDpviaTGgsaaaaiqlLkergvgeekIlvl 157
                 +++++++vlllD vi  G ++ +ai+ L  ++v+   I++l
  EPX74208.1 113 AEMERQRVLLLDDVITAGTAIREAISFLEPKHVQLAGIVLL 153
                 5678999**************************99999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       251  (0.0139997); expected 358.6 (0.02)
Passed bias filter:                      216  (0.0120475); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.28s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1579.63
//
Query:       EPX74209.1  [L=495]
Description: acetylglutamate synthase Arg6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-50  170.5   0.1      5e-50  169.5   0.1    1.4  1  NAT       NAT, N-acetyltransferase, of N-acetylglutamate synt


Domain annotation for each model (and alignments):
>> NAT  NAT, N-acetyltransferase, of N-acetylglutamate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  169.5   0.1   2.8e-54     5e-50      11     165 ..     317     483 ..     313     488 .. 0.93

  Alignments for each domain:
  == domain 1  score: 169.5 bits;  conditional E-value: 2.8e-54
                 TSSEEEE---XEEEESSCCCS....SXCCHHHHHHTTSTTTSSXHHHHHHHHHTSXEEEEEETTXSEEEEE.....EX.SSSSXEEEEEEEXHHHHHT. CS
         NAT  11 gagtlirrGlkvitvkslkel....idlekLksliedsfkrkldvkdYldrlkgkiakiyiaedyeglAivtwedpke.ekevayLdkFavlkssqgs. 103
                 +++tl+rrG+ v+t+   + +    i++e+++ li+dsf+r+ld++ Yl+rlk+++a i+ia+dy g+A+vt+e++++ +++++yLdk+av+ks+qgs 
  EPX74209.1 317 TKTTLLRRGVAVYTYMGVDCItdesISWERVWMLINDSFSRTLDMEAYLQRLKDSLAAIIIAGDYAGIAVVTYEKAQKgKEKIPYLDKLAVSKSAQGSa 415
                 679**************99999999*************************************************97651669***************** PP

                 THHHHHHHHHHHHXSS.EEEEEETTXTTHHHHHHCXSEEEE..ETTEEEEEES...XXXHHHHHHHHH CS
         NAT 104 gvsdvvfkalkkdfpk.LvWrsrednpvnkWyfersdGslk..ksqwvlfWyG...lkdlkeveelve 165
                  +sdv+f+a+ + +pk L+Wrsr dnpvnkWyfers+Gslk  k+ w lfW+G   +k+l++v ++++
  EPX74209.1 416 AISDVLFNAMVELYPKeLIWRSRLDNPVNKWYFERSVGSLKspKTPWRLFWTGdtqVKSLDHVGDYLS 483
                 *****************************************************888888888877776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (495 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       406  (0.0226449); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.44
# Mc/sec: 3417.18
//
Query:       EPX74210.1  [L=183]
Description: GINS complex subunit Psf2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-22   79.9   2.5    1.7e-22   79.9   2.5    1.5  2  Sld5      GINS complex protein


Domain annotation for each model (and alignments):
>> Sld5  GINS complex protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.9   2.5   9.7e-27   1.7e-22       2     109 .]      53     159 ..      52     159 .. 0.98
   2 ?   -3.1   0.0       0.6   1.1e+04      77      85 ..     171     179 ..     162     182 .. 0.57

  Alignments for each domain:
  == domain 1  score: 79.9 bits;  conditional E-value: 9.7e-27
                 EEEHHHHHHHHHTTSCCCHHCHHHCHHHHHHCCCHHTTSSSSTTTTTTHHHHHHHHHHHHT.....HCHHHHHHHHHHHHHHHHHHHTHCHHHHHHHTS CS
        Sld5   2 eLPlWlaelLkrqrrveieppewlspesleailedetkssdlpslpphflelavkllelard....ldelkrllrdllevRlakirkfaenledaaggg 96 
                  +PlWla++Lkrq r++i+ppewl   +l++++e+e +   ++++p+ +le a  ll+++ d    ++e++r+l+ ++e R +k r ++e +++ +   
  EPX74210.1  53 RVPLWLALELKRQHRARIVPPEWLDLSNLQSLQEQEMEMDMFSKMPFRWLETAHLLLNACPDdiedVEEVRRILLTIREARQSKARAGLEAVNEVQ--- 148
                 79*************************************9*********************99999******************************... PP

                 -TCCHCCS-HHHH CS
        Sld5  97 ggellsglseeEk 109
                   ++l++l+++E+
  EPX74210.1 149 --LALDNLGAMEI 159
                 ..**********6 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 0.6
                 HHHHHHHHT CS
        Sld5  77 vRlakirkf 85 
                  R++ki + 
  EPX74210.1 171 NRMRKIVQV 179
                 355555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       471  (0.0262703); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 1350.97
//
Query:       EPX74211.1  [L=138]
Description: borealin Nbl1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.4e-17   61.2   0.9    1.2e-16   60.1   0.9    1.6  1  Nbl1_Borealin_N  Nbl1 / Borealin N terminal


Domain annotation for each model (and alignments):
>> Nbl1_Borealin_N  Nbl1 / Borealin N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.1   0.9   6.6e-21   1.2e-16       3      55 ..      28      80 ..      26      81 .. 0.96

  Alignments for each domain:
  == domain 1  score: 60.1 bits;  conditional E-value: 6.6e-21
  Nbl1_Borealin_N  3 ealLenfdlEveeRirrlraelelllktlrnrfelellriPkavRkmtmkell 55
                      ++Len+ +E+ ++irrlr+++ ll+ t+r+r e+++ +iP+a R+m++++++
       EPX74211.1 28 TDILENLAFELSDKIRRLRSNAGLLASTIRMRGEMRVASIPRAQRNMKLRDFQ 80
                     689*************************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       759  (0.0423336); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.45
# Mc/sec: 930.47
//
Query:       EPX74212.1  [L=446]
Description: CCAAT-binding factor complex subunit Php2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.9e-27   95.7   5.9    3.7e-27   94.7   5.9    1.5  1  CBFB_NFYA  CCAAT-binding transcription factor (CBF-B/NF-YA) s


Domain annotation for each model (and alignments):
>> CBFB_NFYA  CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.7   5.9   2.1e-31   3.7e-27       2      56 .]       9      64 ..       8      64 .. 0.97

  Alignments for each domain:
  == domain 1  score: 94.7 bits;  conditional E-value: 2.1e-31
   CBFB_NFYA  2 plyVNakQynrIlkRReaRakleaelkl.rkarkkylheSRhkhAmrRpRgpgGRF 56
                 lyVNakQy+rIlkRReaRa+le++l+  ++++k+ylheSRhkhAmrRpRgpgGRF
  EPX74212.1  9 GLYVNAKQYHRILKRREARARLEERLRGlQTTKKPYLHESRHKHAMRRPRGPGGRF 64
                58*************************99**************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (446 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       506  (0.0282224); expected 358.6 (0.02)
Passed bias filter:                      234  (0.0130515); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 3237.34
//
Query:       EPX74213.1  [L=164]
Description: tspO/peripheral benzodiazepine receptor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.4e-41  139.6   9.7    8.3e-41  139.2   9.7    1.1  1  TspO_MBR  TspO/MBR family


Domain annotation for each model (and alignments):
>> TspO_MBR  TspO/MBR family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.2   9.7   4.7e-45   8.3e-41       4     132 ..      20     159 ..      17     161 .. 0.96

  Alignments for each domain:
  == domain 1  score: 139.2 bits;  conditional E-value: 4.7e-45
                 HHHHHHHHHHHHHHHCCHHHHHHS---TTS--HHHHTTHHHHHHHHHHHHHHHHHHH............HHHHHHHHHHHHTSGGCTTTTTSGGGHHHH CS
    TspO_MBR   4 alpllvgllgglftkseeewykslrkPpwaPpdwvfppvWtvlyilmgvaaylvwka............lalyavqlvlnllwsplffglkspvlalvd 90 
                 ++p + g+l + +++s++++y++ +kP+++Pp+++f+pvWt+ly++mg+a++l+++a             aly++q++ln++w+plf + ++p+lalv+
  EPX74213.1  20 LVPTAFGWLTASVNRSKIDIYNKSKKPKFHPPAYIFGPVWTALYFAMGYASHLAYRAdpllitnagrkgAALYLAQMALNVSWMPLF-WCRKPKLALVN 117
                 79999*******9999999*********************************************9*99977***************8.66********* PP

                 HHHHHHHHHHHHHHCCCC-HHHHHHHCHHHHHHHHHHHHHHH CS
    TspO_MBR  91 ivallglvvalilafskvdklaallllpyllWllfatylnas 132
                 i al+g+v +li++++++ ++a+ ll+pyl+Wl +a yln++
  EPX74213.1 118 IGALTGVVGWLIKTWWPIAPTASKLLVPYLAWLGYAGYLNLG 159
                 ****************************************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       437  (0.0243739); expected 358.6 (0.02)
Passed bias filter:                      280  (0.0156172); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 1187.71
//
Query:       EPX74214.1  [L=277]
Description: BAR adaptor protein Hob3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-59  201.8   0.6    1.5e-59  201.5   0.6    1.1  1  BAR       BAR domain
     0.0032   17.2   0.1     0.0051   16.5   0.1    1.4  1  BAR_3     BAR domain of APPL family


Domain annotation for each model (and alignments):
>> BAR  BAR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  201.5   0.6   1.7e-63   1.5e-59       1     238 [.      20     243 ..      20     244 .. 0.98

  Alignments for each domain:
  == domain 1  score: 201.5 bits;  conditional E-value: 1.7e-63
         BAR   1 lkKafnRasqlleekvgkaekTkLDedFeelerrldvteklieklvkelkeylqanpgarakqivleklkeqplelLaesmieagkelgedssfgkale 99 
                 +kKa+nRa  ++++k+g++e+T  D++Fe +err++++e++ +kl+ke+k+yl+a+++++a+q+            +a ++  ++ + g++++   ++ 
  EPX74214.1  20 FKKAVNRAGTSVMMKTGHVERTV-DREFETEERRYRTMEAAAKKLQKEAKGYLDALRAMTASQT-----------RIANTIDAFYGDAGSKDG---VSA 103
                 89*********************.****************************************...........******************...999 PP

         BAR 100 kygeavkkl.aqteeelekrvetnfldplrellekefkeiqkerkklehkrlDyDaakarlkklktkkskkakdeekaeeelrkAqqkfeesneelkae 197
                  y+++v++l a+t +el+++ +t++l+p+ +++ ++f++i+ +++k++hk+lD Da +a+++kl +k s+++++ ++ e++  +A++ +e +n++l +e
  EPX74214.1 104 YYRQVVEDLdADTVKELDGPFRTTVLEPISRFC-SYFPDINAAITKRNHKLLDHDAMRAKVQKLVDKPSSDSSKLPRTEKDAANAKDIYETLNNQLITE 201
                 *********99**********************.*******************************9999999988************************ PP

         BAR 198 Lpnllalevefv.nqlqafveaqldfhkqaaqlleqlqqqls 238
                 Lp+l++l+v+++ ++++a+v++ql+f+++ +++++q+qq+ +
  EPX74214.1 202 LPQLISLRVPYLdPSFEALVKIQLRFCREGYEKMAQVQQYFD 243
                 **************************************9865 PP

>> BAR_3  BAR domain of APPL family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.1   5.7e-07    0.0051      19     215 ..      48     243 ..      44     268 .. 0.91

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 5.7e-07
       BAR_3  19 evEaeleelekklkkllKlckrlieagkaysaaqkqfaqsLrelkkeskgdeetdesLkkfsellqelenehtilldqaqrsikkpLekFrke..dlke 115
                   E+   ++e + kkl K+ k +++a +a+ a q  +a+++  +  +  + + ++++ +++ e l+  ++  ++l   +  ++ +p+++F+    d+++
  EPX74214.1  48 TEERRYRTMEAAAKKLQKEAKGYLDALRAMTASQTRIANTIDAFYGDAGSKDGVSAYYRQVVEDLD--ADTVKELDGPFRTTVLEPISRFCSYfpDINA 144
                 56777788999*************************************999999999999999998..589999*****************97779999 PP

       BAR_3 116 vkekkkkFdkesekleaaleknaqlskkkkeseleeadnelkatrkkfhqasldyvlqinelqerkkfeiletllsfmqaqltFfhqGyelfkdlepfm 214
                 + +k+++     + + a ++k    +++  +s+l ++++  ++++  +     + + ++ +l + +   +  ++ ++++ ql F  +Gye + ++++++
  EPX74214.1 145 AITKRNHKLLDHDAMRAKVQKLVDKPSS-DSSKLPRTEKDAANAKDIYETLNNQLITELPQLISLRVPYLDPSFEALVKIQLRFCREGYEKMAQVQQYF 242
                 999999999999999999******9999.999**************99999***********99887777778899****************9999987 PP

       BAR_3 215 k 215
                  
  EPX74214.1 243 D 243
                 5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (277 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       860  (0.047967); expected 358.6 (0.02)
Passed bias filter:                      526  (0.0293379); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.34s 00:00:00.97 Elapsed: 00:00:00.56
# Mc/sec: 1487.42
//
Query:       EPX74215.1  [L=605]
Description: zf-C2H2 type zinc finger protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-09   38.7   0.1    2.8e-09   37.6   0.1    1.5  1  ARS2      Arsenite-resistance protein 2
    2.9e-09   37.1   2.9    8.4e-09   35.6   2.9    1.8  1  DUF3546   Domain of unknown function (DUF3546)


Domain annotation for each model (and alignments):
>> ARS2  Arsenite-resistance protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.6   0.1   3.1e-13   2.8e-09      63     171 ..     470     580 ..     418     597 .. 0.66

  Alignments for each domain:
  == domain 1  score: 37.6 bits;  conditional E-value: 3.1e-13
        ARS2  63 lakdKwlCplsG..KkFkgpEFvrKHilnKHaekveevrkevefFnnylldakrPalpelkdktpprda..naaeaegrafpkqapqgllgyaqprppl 157
                    +K+ C +    K+F gp Fv KHi +KH++ +  v+k +    ny+ld+ r  +p++  ++p ++a   a+++++  +  ++  ++   +  +++l
  EPX74215.1 470 EDEQKYRCHVGTctKLFLGPKFVIKHITKKHPDWLDHVKKVAICLRNYVLDPGRVMDPKV--VSPSHAAqyLANKNHSMSYAGNS-YDRKRNGLEFEDL 565
                 45689***886677**************************999*************9993..33333221222233333333331.1222223334444 PP

        ARS2 158 lgydg.gpqypptqy 171
                 + ++  +p y +++y
  EPX74215.1 566 QHNSFqKPYYRQDTY 580
                 444432455555555 PP

>> DUF3546  Domain of unknown function (DUF3546)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.6   2.9   9.4e-13   8.4e-09      15      91 ..     104     184 ..      90     201 .. 0.80

  Alignments for each domain:
  == domain 1  score: 35.6 bits;  conditional E-value: 9.4e-13
     DUF3546  15 eaqkkYdeYkeefqkkqleeFfeaHkdeeWfrekYhPeel....akrkeelrellkkrlevFlellesgvfdevsleadns 91 
                  + + Y++Yk+++ ++ +++F+ +H +e+Wf + Y  +e+    +++ e+++  + +  ++Fle++e+g++d+++l +d++
  EPX74215.1 104 SLHATYNSYKQDLYARNAKNFVLDHCNEAWFEDAYWFDESqgrlREISEKEKLYRLSMHNIFLEKFENGYYDTFKLPNDQD 184
                 56789******************************666651111455666666788999***************9976553 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (605 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       632  (0.0352502); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.71u 0.35s 00:00:01.06 Elapsed: 00:00:00.55
# Mc/sec: 3293.92
//
Query:       EPX74216.1  [L=614]
Description: peroxisomal targeting signal receptor Pex5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-13   49.3   3.8     0.0007   19.5   0.0    5.5  6  TPR_2     Tetratricopeptide repeat
    4.2e-11   42.2   3.1     0.0027   17.5   0.1    5.5  6  TPR_1     Tetratricopeptide repeat
    9.2e-10   38.2   0.8     0.0035   17.6   0.0    4.3  3  TPR_17    Tetratricopeptide repeat
    3.4e-08   33.9   1.8       0.08   13.5   0.1    4.7  4  TPR_19    Tetratricopeptide repeat
    1.3e-06   28.7   0.2       0.77   10.7   0.0    4.4  4  TPR_14    Tetratricopeptide repeat
    1.5e-06   27.8   0.2       0.23   11.2   0.0    3.9  4  TPR_11    TPR repeat
    2.7e-06   27.4   0.1       0.38   10.9   0.0    3.6  3  TPR_9     Tetratricopeptide repeat
    4.3e-05   23.7   3.4        1.4    9.3   0.0    4.8  6  TPR_12    Tetratricopeptide repeat
     0.0021   18.3   5.4        0.7   10.2   0.1    3.6  2  ANAPC3    Anaphase-promoting complex, cyclosome, subunit 3
     0.0028   17.9   0.2        5.9    7.3   0.0    3.0  2  TPR_20    Tetratricopeptide repeat
     0.0043   17.2  11.5       0.46   10.8   0.1    5.4  6  TPR_8     Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.026   15.2   0.0         12    6.7   0.0    2.8  2  TPR_16    Tetratricopeptide repeat
      0.027   14.3   1.1         11    6.1   0.0    4.1  5  TPR_10    Tetratricopeptide repeat
      0.031   14.3   0.7         35    4.7   0.0    4.2  4  TPR_7     Tetratricopeptide repeat
        1.6    9.5   3.7        4.1    8.2   0.0    3.4  3  TPR_6     Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1       4.4   5.3e+03      22      31 ..     311     320 ..     310     323 .. 0.66
   2 ?   -2.8   0.0       8.3     1e+04      19      34 .]     328     343 ..     328     343 .. 0.86
   3 ?    2.7   0.0      0.14   1.7e+02       7      25 ..     384     402 ..     382     403 .. 0.91
   4 !   19.5   0.0   5.9e-07    0.0007       5      34 .]     458     487 ..     455     487 .. 0.92
   5 !   16.6   0.1   5.1e-06    0.0061       3      34 .]     490     521 ..     488     521 .. 0.95
   6 !    6.5   0.0    0.0089        11       6      30 ..     527     551 ..     523     554 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 4.4
       TPR_2  22 eafekAleld 31 
                 +a+ekA ++ 
  EPX74216.1 311 NAYEKAQKIL 320
                 5788887765 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 8.3
       TPR_2  19 eAleafekAleldPnn 34 
                 eA+ ++ek++  +P +
  EPX74216.1 328 EAAVLLEKSVLQNPSH 343
                 7889999*99999975 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.14
       TPR_2   7 lGlayyklgdyeeAleafe 25 
                 l+ ay ++g  + Al++++
  EPX74216.1 384 LAVAYVNQGSRQSALACLR 402
                 99**************986 PP

  == domain 4  score: 19.5 bits;  conditional E-value: 5.9e-07
       TPR_2   5 ynlGlayyklgdyeeAleafekAleldPnn 34 
                   lG   y l+d+ +A+++f+kA + dP+n
  EPX74216.1 458 TGLGITMYLLDDFSKAADCFQKATQSDPKN 487
                 579*************************97 PP

  == domain 5  score: 16.6 bits;  conditional E-value: 5.1e-06
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldPnn 34 
                 +++ lG ++ ++++  +Al+a++++lel P++
  EPX74216.1 490 LWNKLGASLTNSKQEGRALKAYKRSLELQPQY 521
                 69****************************85 PP

  == domain 6  score: 6.5 bits;  conditional E-value: 0.0089
       TPR_2   6 nlGlayyklgdyeeAleafekAlel 30 
                 nl  a++++  yeeA+e+   A+ +
  EPX74216.1 527 NLSIACINMSCYEEAAEHILNAINI 551
                 89999**************999976 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1       1.5   1.7e+03      23      33 ..     312     322 ..     310     323 .. 0.76
   2 ?   -2.6   0.0         5     6e+03       3      16 ..     346     359 ..     345     360 .. 0.79
   3 ?    1.5   0.0      0.24   2.9e+02       6      24 ..     383     401 ..     379     402 .. 0.89
   4 !   15.7   0.0   8.3e-06    0.0099       3      34 .]     456     487 ..     455     487 .. 0.90
   5 !   17.5   0.1   2.3e-06    0.0027       3      34 .]     490     521 ..     489     521 .. 0.96
   6 ?    2.0   0.0      0.17     2e+02      10      28 ..     531     549 ..     523     554 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 1.5
                 HHHHHHHHSTT CS
       TPR_1  23 yyekALelnPn 33 
                 +yekA ++ ++
  EPX74216.1 312 AYEKAQKILES 322
                 89999998665 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 5
                 HHHHHHHHHHHTT- CS
       TPR_1   3 alynlGnayfklgk 16 
                 ++  l++++  lg+
  EPX74216.1 346 SWQSLAYVHTLLGN 359
                 68888999988886 PP

  == domain 3  score: 1.5 bits;  conditional E-value: 0.24
                 HHHHHHHHTT-HHHHHHHH CS
       TPR_1   6 nlGnayfklgkydeAleyy 24 
                  l++ay ++g  + Al++ 
  EPX74216.1 383 DLAVAYVNQGSRQSALACL 401
                 599*************997 PP

  == domain 4  score: 15.7 bits;  conditional E-value: 8.3e-06
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   3 alynlGnayfklgkydeAleyyekALelnPnn 34 
                 a  +lG + + l ++ +A ++++kA + +P+n
  EPX74216.1 456 AQTGLGITMYLLDDFSKAADCFQKATQSDPKN 487
                 66788999999*******************97 PP

  == domain 5  score: 17.5 bits;  conditional E-value: 2.3e-06
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   3 alynlGnayfklgkydeAleyyekALelnPnn 34 
                  ++ lG+ + + ++   Al++y++ Lel+P++
  EPX74216.1 490 LWNKLGASLTNSKQEGRALKAYKRSLELQPQY 521
                 59****************************86 PP

  == domain 6  score: 2.0 bits;  conditional E-value: 0.17
                 HHHHTT-HHHHHHHHHHHH CS
       TPR_1  10 ayfklgkydeAleyyekAL 28 
                 a+ ++  y+eA e+   A+
  EPX74216.1 531 ACINMSCYEEAAEHILNAI 549
                 6788999******998887 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   0.0   0.00022      0.26       1      31 [.     332     362 ..     332     365 .. 0.92
   2 !   17.6   0.0   2.9e-06    0.0035       1      33 [.     476     508 ..     476     509 .. 0.95
   3 ?    4.4   0.1     0.049        59       1      25 [.     510     534 ..     510     543 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00022
      TPR_17   1 lylkaleldPnnadaynnLAelllknGdlmt 31 
                 l++k++ ++P++ ++++ LA+++  +G+ m+
  EPX74216.1 332 LLEKSVLQNPSHLESWQSLAYVHTLLGNEMR 362
                 679*********************9999886 PP

  == domain 2  score: 17.6 bits;  conditional E-value: 2.9e-06
      TPR_17   1 lylkaleldPnnadaynnLAelllknGdlmtAr 33 
                 +++ka + dP+n +++n L+  l + ++ ++A+
  EPX74216.1 476 CFQKATQSDPKNCVLWNKLGASLTNSKQEGRAL 508
                 89**************************99997 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.049
      TPR_17   1 lylkaleldPnnadaynnLAelllk 25 
                 +y+++lel P ++    nL  +  +
  EPX74216.1 510 AYKRSLELQPQYVRTRSNLSIACIN 534
                 59***********999999776555 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.1      0.26   3.1e+02       9      39 ..     328     358 ..     308     360 .. 0.77
   2 !    7.6   0.0    0.0045       5.4      19      55 ..     372     408 ..     362     418 .. 0.81
   3 ?    5.8   0.0     0.017        20      22      58 ..     451     487 ..     441     497 .. 0.86
   4 !   13.5   0.1   6.7e-05      0.08       8      46 ..     505     543 ..     501     554 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.26
      TPR_19   9 eAlalleqalqedpknaearllLAeallalg 39 
                 eA+ lle+   ++p ++e +  LA ++  lg
  EPX74216.1 328 EAAVLLEKSVLQNPSHLESWQSLAYVHTLLG 358
                 5777778888888888888888887776666 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0045
      TPR_19  19 qedpknaearllLAeallalgqldeAealLdalpeed 55 
                 + + ++ +  ++LA a++++g  + A a+L + + + 
  EPX74216.1 372 SLSSDHINTEMDLAVAYVNQGSRQSALACLRDWLYAS 408
                 55788888999*******************9877665 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.017
      TPR_19  22 pknaearllLAeallalgqldeAealLdalpeedpdd 58 
                   ++ a+ +L + ++ l ++ +A ++ +++ ++dp++
  EPX74216.1 451 KADDKAQTGLGITMYLLDDFSKAADCFQKATQSDPKN 487
                 5589999***************************984 PP

  == domain 4  score: 13.5 bits;  conditional E-value: 6.7e-05
      TPR_19   8 aeAlalleqalqedpknaearllLAeallalgqldeAea 46 
                  +Al+++++ l+  p++ + r +L +a++++  ++eA +
  EPX74216.1 505 GRALKAYKRSLELQPQYVRTRSNLSIACINMSCYEEAAE 543
                 58*****************************88888765 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0       1.2   1.5e+03      19      42 ..     328     351 ..     328     353 .. 0.88
   2 ?    6.5   0.0     0.015        18       5      28 ..     382     405 ..     378     412 .. 0.90
   3 ?    5.0   0.0     0.045        54       6      34 ..     459     487 ..     454     491 .. 0.87
   4 !   10.7   0.0   0.00064      0.77       3      38 ..     490     525 ..     489     530 .. 0.90

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 1.2
      TPR_14  19 eAiallrralalaPddaeawllla 42 
                 eA+ ll++ + ++P+++e w  la
  EPX74216.1 328 EAAVLLEKSVLQNPSHLESWQSLA 351
                 68889*************999888 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.015
      TPR_14   5 lalaeallalGdpdeAiallrral 28 
                 ++la a+ ++G  + A+a+lr++l
  EPX74216.1 382 MDLAVAYVNQGSRQSALACLRDWL 405
                 799*******************96 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.045
      TPR_14   6 alaeallalGdpdeAiallrralalaPdd 34 
                  l+  ++ l+d+ +A++++++a + +P++
  EPX74216.1 459 GLGITMYLLDDFSKAADCFQKATQSDPKN 487
                 688889999***************99986 PP

  == domain 4  score: 10.7 bits;  conditional E-value: 0.00064
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddaeaw 38 
                 ++ +l++ l ++ +  +A+++++r l+l+P+  +++
  EPX74216.1 490 LWNKLGASLTNSKQEGRALKAYKRSLELQPQYVRTR 525
                 588999************************998876 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       6.5   7.7e+03      34      42 .]     384     392 ..     383     399 .. 0.86
   2 !   11.0   0.0   0.00022      0.26       9      37 ..     469     497 ..     463     500 .. 0.90
   3 !   11.2   0.0   0.00019      0.23      13      34 ..     507     528 ..     505     532 .. 0.93
   4 ?   -0.2   0.0       0.7   8.3e+02      10      26 ..     538     554 ..     537     559 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 6.5
      TPR_11  34 LGlayykqG 42 
                 L++ay +qG
  EPX74216.1 384 LAVAYVNQG 392
                 788999888 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00022
      TPR_11   9 kyeeAieaYkkAlkldPdnaeayynLGla 37 
                 ++ +A  +++kA + dP+n  ++++LG+ 
  EPX74216.1 469 DFSKAADCFQKATQSDPKNCVLWNKLGAS 497
                 7899***********************75 PP

  == domain 3  score: 11.2 bits;  conditional E-value: 0.00019
      TPR_11  13 AieaYkkAlkldPdnaeayynL 34 
                 A++aYk+ l+l P++++  +nL
  EPX74216.1 507 ALKAYKRSLELQPQYVRTRSNL 528
                 9****************99998 PP

  == domain 4  score: -0.2 bits;  conditional E-value: 0.7
      TPR_11  10 yeeAieaYkkAlkldPd 26 
                 yeeA e+  +A+++ +d
  EPX74216.1 538 YEEAAEHILNAINIVQD 554
                 9******99***99877 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.0    0.0027       3.2      16      56 ..     362     405 ..     359     415 .. 0.82
   2 ?    4.1   0.0     0.043        51      36      61 ..     461     486 ..     459     489 .. 0.89
   3 !   10.9   0.0   0.00032      0.38       4      50 ..     497     543 ..     494     554 .. 0.91

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0027
       TPR_9  16 avverllll...aPddpeerrdRGlllaqlGclsaAladLeayl 56 
                 +vve ll      +d++   +d +++++ +G  + Ala+L   l
  EPX74216.1 362 RVVEALLETkslSSDHINTEMDLAVAYVNQGSRQSALACLRDWL 405
                 66777776544489999999********************8765 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.043
       TPR_9  36 GlllaqlGclsaAladLeaylalapd 61 
                 G+  + l+++s+A+++++ + + +p+
  EPX74216.1 461 GITMYLLDDFSKAADCFQKATQSDPK 486
                 6777899*************999996 PP

  == domain 3  score: 10.9 bits;  conditional E-value: 0.00032
       TPR_9   4 iaireedweralavverllllaPddpeerrdRGlllaqlGclsaAla 50 
                  + ++++  ral+++ r l l+P+ ++ r    ++   + c+++A++
  EPX74216.1 497 SLTNSKQEGRALKAYKRSLELQPQYVRTRSNLSIACINMSCYEEAAE 543
                 567788889************************************97 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       2.7   3.2e+03      24      41 ..     307     324 ..     304     339 .. 0.70
   2 ?   -2.6   0.0       5.7   6.8e+03      29      60 ..     330     359 ..     324     360 .. 0.67
   3 ?    0.5   0.0      0.63   7.5e+02      45      69 ..     378     402 ..     363     405 .. 0.71
   4 !    9.3   0.0    0.0011       1.4      47      74 ..     456     483 ..     449     486 .. 0.89
   5 !    8.2   0.3    0.0024       2.9       5      67 ..     490     544 ..     487     554 .. 0.78
   6 ?    4.4   0.0     0.039        47       5      38 ..     524     557 ..     520     564 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 2.7
      TPR_12  24 ellekaleiarrllGpdh 41 
                  l e a+e a+++l+ + 
  EPX74216.1 307 PLIENAYEKAQKILESNG 324
                 566666666666666655 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 5.7
      TPR_12  29 aleiarrllGpdhpltattlrnLgrlyralgr 60 
                 a+ + +++   ++p  +++ + L+ ++ +lg+
  EPX74216.1 330 AVLLEKSV--LQNPSHLESWQSLAYVHTLLGN 359
                 55555555..5667778888888888887775 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.63
      TPR_12  45 attlrnLgrlyralgryeeAlelle 69 
                 ++t  +L+ +y  +g  + Al+ l+
  EPX74216.1 378 INTEMDLAVAYVNQGSRQSALACLR 402
                 6666777777777777777777765 PP

  == domain 4  score: 9.3 bits;  conditional E-value: 0.0011
      TPR_12  47 tlrnLgrlyralgryeeAlelleealai 74 
                 ++ +Lg++ ++l+++ +A + +++a++ 
  EPX74216.1 456 AQTGLGITMYLLDDFSKAADCFQKATQS 483
                 5679*********************975 PP

  == domain 5  score: 8.2 bits;  conditional E-value: 0.0024
      TPR_12   5 alnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlel 67 
                 ++n+l+a l+  ++   Al+ ++++le++     p+   +++t+ nL++++  +  yeeA e+
  EPX74216.1 490 LWNKLGASLTNSKQEGRALKAYKRSLELQ-----PQ---YVRTRSNLSIACINMSCYEEAAEH 544
                 56679999999999999*********999.....76...488888888888777777777776 PP

  == domain 6  score: 4.4 bits;  conditional E-value: 0.039
      TPR_12   5 alnnlaavlrrlgrydeAlellekaleiarrllG 38 
                 + +nl  ++  +  y+eA e+   a++i++  +G
  EPX74216.1 524 TRSNLSIACINMSCYEEAAEHILNAINIVQDKHG 557
                 66799999999******************98887 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.1   0.00058       0.7       8      80 ..     329     402 ..     322     404 .. 0.88
   2 !    7.2   1.4    0.0048       5.7      16      81 ..     478     547 ..     438     548 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00058
                 HHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH- CS
      ANAPC3   8 AiflaerllaaetespedayllAlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaLe 80 
                 A  l+e+ + +++ ++e+   lA+++ l+g+  r  e l ++  l s +++  + +A +++ +++ + A+a+L 
  EPX74216.1 329 AAVLLEKSVLQNPSHLESWQSLAYVHTLLGNEMRVVEALLETkSLSSDHINTEMDLAVAYVNQGSRQSALACLR 402
                 5556666665999************************99999999************************99996 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0048
                 H.HHH--HHHHHH...HHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH-S CS
      ANAPC3  16 laaetespedayl...lAlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaLek 81 
                 ++a + +p++  l   l+ +l +++q  rA++ ++++ +l+++  + r  +  +++ ++ yeeA  ++ +
  EPX74216.1 478 QKATQSDPKNCVLwnkLGASLTNSKQEGRALKAYKRSlELQPQYVRTRSNLSIACINMSCYEEAAEHILN 547
                 3455666666443366799999******************************************999876 PP

>> TPR_20  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0    0.0049       5.9      19      49 ..     375     405 ..     357     413 .. 0.81
   2 !    7.3   0.0    0.0051         6       5      50 ..     505     550 ..     501     557 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0049
      TPR_20  19 pddldarldlAlallaagryeeAleqLleil 49 
                  d +++++dlA a++ +g ++ Al+ L ++l
  EPX74216.1 375 SDHINTEMDLAVAYVNQGSRQSALACLRDWL 405
                 5667999*****************9998877 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0051
      TPR_20   5 apelaeleaalaanpddldarldlAlallaagryeeAleqLleilk 50 
                    l++ ++ l+ +p+ + +r +l+ a +  + yeeA+e++l+ + 
  EPX74216.1 505 GRALKAYKRSLELQPQYVRTRSNLSIACINMSCYEEAAEHILNAIN 550
                 56788999999*******************************9876 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1       5.6   6.7e+03      23      30 ..     312     319 ..     310     321 .. 0.61
   2 ?   -0.6   0.0       1.8   2.1e+03       2      16 ..     345     359 ..     344     368 .. 0.91
   3 ?    2.5   0.0      0.18   2.2e+02       6      25 ..     383     402 ..     382     407 .. 0.90
   4 !    6.9   0.0    0.0069       8.3      14      34 .]     467     487 ..     459     487 .. 0.93
   5 !   10.8   0.1   0.00039      0.46       3      33 ..     490     520 ..     490     521 .. 0.95
   6 ?   -2.2   0.0       5.7   6.8e+03      16      28 ..     537     549 ..     526     551 .. 0.62

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 5.6
                 HHHHHHHH CS
       TPR_8  23 yyekalel 30 
                 +yeka ++
  EPX74216.1 312 AYEKAQKI 319
                 56666654 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 1.8
                 CHHHHHHHHHHHTT- CS
       TPR_8   2 eayynlgsiylklgd 16 
                 e+++ l++++  lg+
  EPX74216.1 345 ESWQSLAYVHTLLGN 359
                 89********99997 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.18
                 HHHHHHHHTT-HHHHHHHHH CS
       TPR_8   6 nlgsiylklgdyeeAkeyye 25 
                  l+ +y ++g  ++A ++++
  EPX74216.1 383 DLAVAYVNQGSRQSALACLR 402
                 5899*************997 PP

  == domain 4  score: 6.9 bits;  conditional E-value: 0.0069
                 TT-HHHHHHHHHHHHHHHHH. CS
       TPR_8  14 lgdyeeAkeyyekaleldpdn 34 
                 l d+ +A  +++ka++ dp+n
  EPX74216.1 467 LDDFSKAADCFQKATQSDPKN 487
                 78999**************97 PP

  == domain 5  score: 10.8 bits;  conditional E-value: 0.00039
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyekaleldpd 33 
                 ++++lg  + + ++   A ++y++ lel+p+
  EPX74216.1 490 LWNKLGASLTNSKQEGRALKAYKRSLELQPQ 520
                 599***************************8 PP

  == domain 6  score: -2.2 bits;  conditional E-value: 5.7
                 -HHHHHHHHHHHH CS
       TPR_8  16 dyeeAkeyyekal 28 
                  yeeA e +  a+
  EPX74216.1 537 CYEEAAEHILNAI 549
                 4677766666665 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0     0.024        29       2      32 ..     383     411 ..     382     419 .. 0.88
   2 ?    6.7   0.0    0.0097        12      12      66 ..     469     520 ..     467     528 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.024
      TPR_16   2 alaraalragdyddAaaal.eaalkrdpssPd 32 
                 +la a++++g  + A+a l +++ +++   P+
  EPX74216.1 383 DLAVAYVNQGSRQSALACLrDWLYASH---PE 411
                 7899***************99999999...65 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0097
      TPR_16  12 dyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalraapd 66 
                 d+ +Aa  ++ a+ +d   P +   ++ lg ++   +   +A+ +y++ l+  p+
  EPX74216.1 469 DFSKAADCFQKATQSD---PKNCVLWNKLGASLTNSKQEGRALKAYKRSLELQPQ 520
                 7899999999999999...777779999999999999999999999999999987 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       5.6   6.7e+03      24      39 ..     308     323 ..     305     325 .. 0.72
   2 ?    6.1   0.0    0.0089        11       7      26 ..     383     402 ..     382     404 .. 0.92
   3 ?   -2.0   0.0       3.2   3.8e+03       5      28 ..     457     480 ..     456     482 .. 0.87
   4 ?    2.7   0.1       0.1   1.2e+02       6      31 ..     492     517 ..     492     518 .. 0.92
   5 ?    0.0   0.0      0.71   8.5e+02       3      32 ..     523     552 ..     522     559 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 5.6
      TPR_10  24 lleealairrrllGpd 39 
                 l e a++  +++l+ +
  EPX74216.1 308 LIENAYEKAQKILESN 323
                 5677888888888876 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0089
      TPR_10   7 NLanalrqrgrydeAealle 26 
                 +La+a+ ++g ++ A+a l+
  EPX74216.1 383 DLAVAYVNQGSRQSALACLR 402
                 69**************9987 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 3.2
      TPR_10   5 lnNLanalrqrgrydeAealleea 28 
                 ++ L+++ + + ++ +A + +++a
  EPX74216.1 457 QTGLGITMYLLDDFSKAADCFQKA 480
                 677999999999*****9999998 PP

  == domain 4  score: 2.7 bits;  conditional E-value: 0.1
      TPR_10   6 nNLanalrqrgrydeAealleealai 31 
                 n L++ l++ ++  +A++ ++++l++
  EPX74216.1 492 NKLGASLTNSKQEGRALKAYKRSLEL 517
                 789********************987 PP

  == domain 5  score: 0.0 bits;  conditional E-value: 0.71
      TPR_10   3 sslnNLanalrqrgrydeAealleealair 32 
                 ++++NL++a  ++  y+eA ++   a++i 
  EPX74216.1 523 RTRSNLSIACINMSCYEEAAEHILNAINIV 552
                 578999999999999999999988888875 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.1     0.072        86       5      23 ..     384     402 ..     383     412 .. 0.90
   2 ?    4.7   0.0      0.03        35      12      33 ..     467     486 ..     460     488 .. 0.87
   3 ?   -0.9   0.1       1.8   2.1e+03      17      28 ..     506     517 ..     506     520 .. 0.85
   4 ?   -0.4   0.0       1.3   1.6e+03       4      26 ..     527     549 ..     524     558 .. 0.72

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.072
       TPR_7   5 LarlysrlGdyeeAielye 23 
                 La++y+++G ++ A+ +++
  EPX74216.1 384 LAVAYVNQGSRQSALACLR 402
                 9**************9987 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.03
       TPR_7  12 lGdyeeAielyeqsLaltkdpe 33 
                 l d+++A++++++  a+ +dp 
  EPX74216.1 467 LDDFSKAADCFQK--ATQSDPK 486
                 579**********..9988885 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 1.8
       TPR_7  17 eAielyeqsLal 28 
                 +A++ y++sL+l
  EPX74216.1 506 RALKAYKRSLEL 517
                 69999***9987 PP

  == domain 4  score: -0.4 bits;  conditional E-value: 1.3
       TPR_7   4 nLarlysrlGdyeeAielyeqsL 26 
                 nL  ++ ++  yeeA+e+   ++
  EPX74216.1 527 NLSIACINMSCYEEAAEHILNAI 549
                 77777888888999999877655 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       3.3   3.9e+03       6      24 ..     384     402 ..     382     403 .. 0.85
   2 ?    8.2   0.0    0.0034       4.1       5      32 ..     459     486 ..     455     487 .. 0.90
   3 ?   -0.3   0.1       1.8   2.2e+03       6      32 ..     494     520 ..     493     521 .. 0.73

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 3.3
                 HHHHHHHHHHHHHHHHHHH CS
       TPR_6   6 lalsyrklgdtdkAleale 24 
                 la +y ++g  + Al+ l+
  EPX74216.1 384 LAVAYVNQGSRQSALACLR 402
                 899****999999998886 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.0034
                 HHHHHHHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6   5 klalsyrklgdtdkAlealerlikeYPd 32 
                  l+  ++ l+d +kA + +++  ++ P+
  EPX74216.1 459 GLGITMYLLDDFSKAADCFQKATQSDPK 486
                 589999**99**************9997 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 1.8
                 HHHHHHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6   6 lalsyrklgdtdkAlealerlikeYPd 32 
                 l+ s+ + ++  +Al+a++r ++  P+
  EPX74216.1 494 LGASLTNSKQEGRALKAYKRSLELQPQ 520
                 5566666557789*****998887775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (614 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       996  (0.0555525); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.66u 0.24s 00:00:00.90 Elapsed: 00:00:00.46
# Mc/sec: 4037.80
//
Query:       EPX74217.1  [L=967]
Description: AGC protein kinase Ppk31 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.7e-52  176.5   0.1    1.8e-31  109.5   0.2    2.3  2  Pkinase         Protein kinase domain
    1.3e-21   77.1   0.0    6.3e-16   58.4   0.0    2.3  2  Pkinase_Tyr     Protein tyrosine kinase
    0.00014   20.8   0.0    0.00025   20.0   0.0    1.3  1  Pkinase_fungal  Fungal protein kinase
     0.0011   18.9   0.0      0.014   15.4   0.0    2.2  2  APH             Phosphotransferase enzyme family
     0.0041   16.8   0.5        1.8    8.1   0.0    2.7  2  FTA2            Kinetochore Sim4 complex subunit FTA2
  ------ inclusion threshold ------
      0.031   13.9   0.7      0.076   12.6   0.1    1.9  2  RIO1            RIO1 family
       0.07   12.4   0.0        3.7    6.8   0.0    2.7  3  Kinase-like     Kinase-like
      0.089   12.1   0.7       0.19   11.1   0.2    1.8  2  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
      0.096   12.5   0.0       0.51   10.1   0.0    2.2  2  IL13            Interleukin-13
       0.11   12.5   0.3         12    5.9   0.0    2.5  2  HbrB            HbrB-like


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.5   0.2     1e-34   1.8e-31       2     153 ..     535     688 ..     534     701 .. 0.93
   2 !   64.5   0.0   5.1e-21   9.2e-18     154     264 .]     771     874 ..     752     874 .. 0.81

  Alignments for each domain:
  == domain 1  score: 109.5 bits;  conditional E-value: 1e-34
                 EEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHS.CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HH CS
     Pkinase   2 ekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklk.hpnivrlyevfeekdelylvleyveggeladllerkgslsee 98 
                 + ++++ +G++++Vy +++ +tg+ +A+K i k   k+ ++ k+++ E + ++  k  +n+v++y++fe++  ++lv+++ +gg+ ++l+e+ g l+e+
  EPX74217.1 535 TFVREINRGASSRVYLVKKISTGNYYALKAIPKLGLKDPDKlKALMYEKANMEIQKyGSNVVKIYYAFESEGFFCLVMDFFNGGDCQTLVEKLGPLPEQ 633
                 5678999*************************9998888887999999999998889****************************************** PP

                 HHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS CS
     Pkinase  99 eakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk 153
                  ++ +++++le++e lH+++iiHrD+Kp+N+Lid++g+++++D+Gl+ + ++ss+
  EPX74217.1 634 WVQTYIAELLEAVEILHKMSIIHRDIKPANMLIDHNGHIRLADLGLSDNKDESSD 688
                 ***********************************************99888765 PP

  == domain 2  score: 64.5 bits;  conditional E-value: 5.1e-21
                 BCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCS CS
     Pkinase 154 ltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkR 252
                  +s++gt++Y+APEvl+++e s+  D+W++G++l+e+ltg  pf++++ +  v+  +++        +++  + + +++ s ea+dl kkll+ +p kR
  EPX74217.1 771 GKSITGTPNYMAPEVLSGTE-SPMNDIWAIGCVLFEMLTGIIPFQSDTIRG-VWDRIQR--------NDVGWEKDSDEQHSLEAIDLAKKLLEANPDKR 859
                 57899***********6554.8999********************333332.3333333........2445556667788******************* PP

                 TT...HHHHHTSGGG CS
     Pkinase 253 lt...aeellqhpyl 264
                 l+   ++e+++hp++
  EPX74217.1 860 LGingFSEIKRHPFF 874
                 *988899******98 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.4   0.0   3.5e-19   6.3e-16       3     163 ..     536     694 ..     534     706 .. 0.81
   2 !   16.2   0.0   2.7e-06    0.0048     165     250 ..     774     860 ..     761     870 .. 0.76

  Alignments for each domain:
  == domain 1  score: 58.4 bits;  conditional E-value: 3.5e-19
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEEST..TSSHHHHHHHHHHHHHHHTS.-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlke..eateeekeelleeakimkkl.khpnivkllgvctkeepllivteyvkgGdLlkfLrkkek 97 
                  + +++ +Ga ++V+  +      ++    a+K + +   ++ ++ ++l+ e + m+      n+vk++ +  +e+  ++v+++ +gGd ++ ++k   
   EPX74217.1 536 FVREINRGASSRVYLVKKI----STGNYYALKAIPKlgLKDPDKLKALMYEKANMEIQkYGSNVVKIYYAFESEGFFCLVMDFFNGGDCQTLVEKL-- 627
                  5677788888888877766....44445556655332134556689999999999988689****************************9999887.. PP

                  TTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEET.TTSSEEEETT CS
  Pkinase_Tyr  98 ekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardi.ekddeyvkke 163
                   +l  +++  +++++ +++e L++++++Hrd+   N+L+++n +++++D GL+++  e++d+y++++
   EPX74217.1 628 GPLPEQWVQTYIAELLEAVEILHKMSIIHRDIKPANMLIDHNGHIRLADLGLSDNKdESSDKYYHEK 694
                  9****************************************************99953334443333 PP

  == domain 2  score: 16.2 bits;  conditional E-value: 2.7e-06
                  STSGGGGS-HHHHHHSEEEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHHHTTEE...S-BBTTSBHHHHHHHHHHT-SSGGGS- CS
  Pkinase_Tyr 165 aklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglkneevleklkegkr...lekpekcpeelyelmkkcweedpeeRp 250
                   +   ++mapE+l+ ++ +   D+W+ G +l+E++t g  p+++ + + v ++++++      +  e+ + e  +l kk +e++p++R 
   EPX74217.1 774 ITGTPNYMAPEVLSGTE-SPMNDIWAIGCVLFEMLT-GIIPFQSDTIRGVWDRIQRNDVgweKDSDEQHSLEAIDLAKKLLEANPDKRL 860
                  556679*******9877.6678**************.*****99999999999966543211445555666666778888888888886 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   1.4e-07   0.00025     316     392 ..     643     791 ..     636     804 .. 0.65

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 1.4e-07
  Pkinase_fungal 316 IkghrsLflkagiLHrDiSenNilit.............................................................dskkeger 349
                     +++ + L+ k  i+HrDi   N+li                                                               +++e ++
      EPX74217.1 643 LEAVEILH-KMSIIHRDIKPANMLIDhnghirladlglsdnkdessdkyyhekinqlkevshegarkqlvnglkdkakkemnptnrkTTEEEFDP 736
                     67778999.*****************666666666666666666666666666666666666666666666666555555555544333444555 PP

  Pkinase_fungal 350 kglLiDLDlakelsddssesgare...........................rtGTleFmaievlkgeeHs 392
                        LiD+D                                            tGT+++ma evl+g+e s
      EPX74217.1 737 FERLIDVDT--------------SnlnkamsqvfrarlkvtypgelksgksITGTPNYMAPEVLSGTE-S 791
                     566666664..............0444444444444445555555555555*************9643.4 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.24   4.3e+02       2      31 ..     537     568 ..     537     622 .. 0.72
   2 !   15.4   0.0   7.7e-06     0.014     146     187 ..     632     672 ..     618     681 .. 0.72

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.24
                 EEEE--.SSCEEEEEEETT.-.-EEEEEE-TT CS
         APH   2 vrelsggasnrtylvttpa.g.ryvlrrnppa 31 
                 vre++ gas+r+ylv+  + g  y+l+ +p+ 
  EPX74217.1 537 VREINRGASSRVYLVKKIStGnYYALKAIPKL 568
                 699************97775657778877665 PP

  == domain 2  score: 15.4 bits;  conditional E-value: 7.7e-06
                 HHHHHHHHHHHHHH--SSS-EEEE-SS-SGGGEEEC..TTEE CS
         APH 146 eeleeqvlaalaallpgelptvllHgDlhpgNllvdpddgrv 187
                 e+  +  +a+l++ +    +++++H+D++p N+l+d ++g++
  EPX74217.1 632 EQWVQTYIAELLEAVEILHKMSIIHRDIKPANMLID-HNGHI 672
                 33333355666666666999****************.77776 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.1   0.1    0.0041       7.3      17      62 ..     527     574 ..     471     609 .. 0.73
   2 !    8.1   0.0     0.001       1.8     170     204 ..     631     665 ..     607     678 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0041
        FTA2  17 dfsaekdiefleyLgkglhsiVlkvk..irgkeYALKlFrfleaeele 62 
                 ++   k++ f+  +++g++s+V+ vk    g+ YALK   +l  ++++
  EPX74217.1 527 TPRSLKEFTFVREINRGASSRVYLVKkiSTGNYYALKAIPKLGLKDPD 574
                 3333478889**********9999974235779****87777666665 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.001
        FTA2 170 qeelevsqlpkllrdlkklhklgIvvrDlkeenyi 204
                 +e+  + ++ +ll+ +++lhk  I++rD+k+ n++
  EPX74217.1 631 PEQWVQTYIAELLEAVEILHKMSIIHRDIKPANML 665
                 6677788999********************99975 PP

>> RIO1  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.3   0.0       6.3   1.1e+04     124     138 ..     144     158 ..     133     158 .. 0.79
   2 ?   12.6   0.1   4.2e-05     0.076      82     152 ..     609     680 ..     586     702 .. 0.75

  Alignments for each domain:
  == domain 1  score: -4.3 bits;  conditional E-value: 6.3
                 TSTEEESS-STTSEE CS
        RIO1 124 eaglvHaDLSeyNvl 138
                 + ++ H D+  +N+l
  EPX74217.1 144 RYHITHMDFVLFNTL 158
                 56899****999987 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 4.2e-05
                 EEEEE--EETTEEGGBH.HHCG.-.HHHHHHHHHHHHHHHHHHHHTSTEEESS-STTSEEEETT.EEEE--GTTE CS
        RIO1  82 vlvmefigedgvaapkl.kdve.e.eeeaeelyeevleemrklykeaglvHaDLSeyNvlvded.kvviIDvsQa 152
                 +lvm+f +  g   ++l +++    e+  +++ +e+le++++ ++++ ++H D+   N+l+d++ ++ + D++ +
  EPX74217.1 609 CLVMDFFN--GGDCQTLvEKLGpLpEQWVQTYIAELLEAVEI-LHKMSIIHRDIKPANMLIDHNgHIRLADLGLS 680
                 79*****9..44444440444444355566667777776655.55****************99989999998755 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       1.1   1.9e+03      17      44 ..     537     564 ..     525     592 .. 0.72
   2 ?    6.8   0.0    0.0021       3.7     149     188 ..     639     677 ..     629     685 .. 0.88
   3 ?    2.2   0.0     0.053        95     231     254 ..     794     817 ..     743     826 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 1.1
  Kinase-like  17 gellkkgdrsvvfevkdqetgeplavkv 44 
                  +  +++g +s v++vk   tg++ a+k 
   EPX74217.1 537 VREINRGASSRVYLVKKISTGNYYALKA 564
                  45688999999**********9999985 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0021
  Kinase-like 149 lTlqlirlaanLqakglvhgkftvdnllldekgglmlggf 188
                  + ++l+  +  L++  ++h ++++ n+l d++g + l ++
   EPX74217.1 639 I-AELLEAVEILHKMSIIHRDIKPANMLIDHNGHIRLADL 677
                  5.678888999************************99986 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.053
  Kinase-like 231 ldaWqlGlviyriwclklPltlat 254
                   d W++G v + +    +P++ +t
   EPX74217.1 794 NDIWAIGCVLFEMLTGIIPFQSDT 817
                  59*****************98876 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.2    0.0001      0.19     117     189 ..     632     701 ..     616     723 .. 0.83
   2 ?   -3.4   0.0       2.8     5e+03     164     201 ..     900     935 ..     898     938 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.0001
         Kdo 117 eelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDldkarlrlr.adrwrekdLarLkrs 189
                 e+  ++ + ++  +++ lh++ + H+d+ + n+l++ ++    +i l Dl  + ++    d+  ++ +++Lk  
  EPX74217.1 632 EQWVQTYIAELLEAVEILHKMSIIHRDIKPANMLIDHNG----HIRLADLGLSDNKDEsSDKYYHEKINQLKEV 701
                 55556666677778999**********************....************9998999999999999875 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2.8
         Kdo 164 iDldkarlrlradrwrekdLarLkrsflkielteadwe 201
                 i +++ +l +  +     +L++L++s ++i +   d  
  EPX74217.1 900 IYFERMELAI--QASTGMNLKALNFSNKNILWEISDQL 935
                 5666666666..55567899999999888888777665 PP

>> IL13  Interleukin-13
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00029      0.51      19      66 ..      59     107 ..      52     114 .. 0.80
   2 ?   -1.8   0.0       1.4   2.5e+03      38      57 ..     346     365 ..     330     370 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00029
                 XXSS-CHH.HHHHHHHHHHHHHHSTSS-CGTC-EEE---SSSSHHHHHH CS
        IL13  19 pgpvprsk.alkeLieeLvnitqnqkasLCngsmvWsvnltaevycaal 66 
                  ++vpr++ a + L +  + it+ q + LCn+smv  + ++++ y a+ 
  EPX74217.1  59 KTSVPRVRrATQMLFNGSSKITHFQTSLLCNTSMVPTMFMNSKDYEASS 107
                 456777554788899999*****************99988888887665 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 1.4
                 HHHSTSS-CGTC-EEE---S CS
        IL13  38 itqnqkasLCngsmvWsvnl 57 
                 ++ + + +LCn  m++ + +
  EPX74217.1 346 LSLKYNLKLCNHNMIYGMTF 365
                 45556678******997765 PP

>> HbrB  HbrB-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.2     0.027        49      46      90 ..     283     327 ..     271     336 .. 0.87
   2 ?    5.9   0.0    0.0067        12      14      55 ..     611     659 ..     606     666 .. 0.78

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.027
        HbrB  46 kalsllvedleeLlstglltLenkLsqleeerllkrLveiWkffy 90 
                 ++l++ ++ +eeL ++ +l+ +++L  + +e++lk+ + +Wkf +
  EPX74217.1 283 RQLTQAEKTFEELGKNTFLVVSEELAIEMKEKVLKKTILLWKFDF 327
                 6777788999********************************976 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0067
        HbrB  14 vlplFngedlrvpiEdlnklvelhiqlvier......a.kalsllvedl 55 
                 v+  Fng d ++ +E+l+ l e+ +q+ i++        +++s++++d+
  EPX74217.1 611 VMDFFNGGDCQTLVEKLGPLPEQWVQTYIAElleaveIlHKMSIIHRDI 659
                 7899*************99988888888887555565236777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (967 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       674  (0.0375927); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.77u 0.30s 00:00:01.07 Elapsed: 00:00:00.48
# Mc/sec: 6115.68
//
Query:       EPX74218.1  [L=567]
Description: oxalyl-CoA decarboxylase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.4e-45  155.0   0.1    3.9e-45  153.6   0.1    1.7  2  TPP_enzyme_N    Thiamine pyrophosphate enzyme, N-terminal TPP
    2.2e-34  118.2   0.0    4.3e-34  117.2   0.0    1.5  1  TPP_enzyme_M    Thiamine pyrophosphate enzyme, central domain
      2e-23   82.8   0.0    4.2e-23   81.8   0.0    1.5  1  TPP_enzyme_C    Thiamine pyrophosphate enzyme, C-terminal TPP
  ------ inclusion threshold ------
       0.15   12.1   0.0       0.28   11.2   0.0    1.4  1  zinc-ribbons_6  zinc-ribbons


Domain annotation for each model (and alignments):
>> TPP_enzyme_N  Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.6   0.1   8.6e-49   3.9e-45       5     169 ..       7     169 ..       5     172 .. 0.98
   2 ?   -3.0   0.0       1.1   4.9e+03      74     103 ..     187     216 ..     184     227 .. 0.72

  Alignments for each domain:
  == domain 1  score: 153.6 bits;  conditional E-value: 8.6e-49
                   HHHHHHHHHCT--EEEE---CCCHHHHCCHHCT.TSEEEE-SSHHHHHHHHHHHHHHHTS-EEEEE-CHHHHHHCHHHHHHHHHHT--EEEEEEE-- CS
  TPP_enzyme_N   5 ealvraLkalgvehvfgvpGsrilplldalseeqgirvvlarhEqgaafaAdgyaratgkpgvvlvtsgpGatnaltalaeAkvdriPllvlsgdrp 101
                   ++++r+L +l+v++vfg++G  + ++++a+++  gi+++ +r+Eq+aa+aA++y  +t+ pgv++v  gpG+++al ++++A+ +r+Pll+++g+++
    EPX74218.1   7 DVVARTLLDLNVKVVFGIVGIPVIEVCEAIQKV-GIHFIAFRNEQSAAYAASAYGYLTKTPGVCIVVGGPGVVHALAGVFNASANRWPLLLMAGSSA 102
                   789******************************.7************************************************************** PP

                   CCCHHS..TC--T-CCHHHCCCSSEEEE-SSGGGHHHHHHHHHHHHHSSS--EEEEEEEHHHCC-EEE CS
  TPP_enzyme_N 102 tslrgqgvlqqeldqlalfrpvtkyaervtspeelpealrrAirtalsgrpgPvylelpkdvlleevd 169
                   ts+r +g++q eldq+  + p tk a r+ +++ +pe+++rA+ ++l+g+pgP y++lp+d +++  +
    EPX74218.1 103 TSQRYRGAFQ-ELDQVTYLSPSTKLALRPPTATMTPELIHRAYHVSLNGTPGPCYVDLPADFIQSSLQ 169
                   **********.**************************************************9998766 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.1
                   HHHHHCHHHHHHHHHHT--EEEEEEE--CC CS
  TPP_enzyme_N  74 pGatnaltalaeAkvdriPllvlsgdrpts 103
                   p+ + +  a++  k++++Pl+++   ++++
    EPX74218.1 187 PNPAQVQKAIHFLKSAKSPLVIIGKGASYA 216
                   555566667777788899999987666655 PP

>> TPP_enzyme_M  Thiamine pyrophosphate enzyme, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.2   0.0   9.7e-38   4.3e-34       1     136 [.     192     321 ..     192     322 .. 0.96

  Alignments for each domain:
  == domain 1  score: 117.2 bits;  conditional E-value: 9.7e-38
                   HHHHHHHHHH-SSEEEEE-CHHCHTTGHHHHHHHHHHHT-EEEEEGGGTTSS-TTSTTEEEESGGGSCHHHHHHHHH-SEEEEES-SSSTCCCTTTT CS
  TPP_enzyme_M   1 iekaaellkaakrpvilvGggvarsgaseelrelaeklgiPvvttlmgkgvipedhplylgmlglhgskaanealeeaDlvlalGarfddirttgse 97 
                   ++ka+  lk+ak p++++G+g+++++a+e l +++ek++iP++ t+mgkgv+pe+h l+        s+a++ al++aD+vl++Gar++++ ++g +
    EPX74218.1 192 VQKAIHFLKSAKSPLVIIGKGASYARAEEILSNFIEKTHIPFLPTPMGKGVLPENHRLN-------FSSARSTALKNADVVLLVGARLNWVLHFGLS 281
                   689******************************************************99.......48999************************** PP

                   TTTTTT-EEEEEESSCCCCTTCC.--SEEEECTHHHHHHH CS
  TPP_enzyme_M  98 pefapeakiihididpaeigkny.qvdlaivgdvketlea 136
                   p+++++ k+i+id++p+e+g n   v+l+i++d++ +l a
    EPX74218.1 282 PRWSKDVKFIQIDSNPEELGSNGgDVSLGIWSDINLALHA 321
                   ***9999***************94588********99987 PP

>> TPP_enzyme_C  Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.8   0.0   9.3e-27   4.2e-23      11     153 .]     402     543 ..     393     543 .. 0.85

  Alignments for each domain:
  == domain 1  score: 81.8 bits;  conditional E-value: 9.3e-27
                   HHHTTSSSSEEECETTTS-TTTHHHHHHHHHHHSTTSEEEEEEEHHHHHHTGGGHHHHHHTT-SEEEEEEE-SBCCCHHHHHHHHTCCTTTTSBB.. CS
  TPP_enzyme_C  11 rllkvkrprsyltsgglgtmGyglpaAiGaklakpdrevvaivGDGgflmilqelatavrrnlpitvvvlnNegygmtggqqepfggkrksgpagk. 106
                   r+l+v+ pr  l+sg+++tmG+gl+++i+a++a+p ++ va+ GD++f ++ +el+tavr nl+i+++v+nN+g     g  e++++k ks+ +   
    EPX74218.1 402 RILEVTHPRGRLDSGTMATMGVGLSYSIAASIANPANKTVAVEGDSAFGFSAMELETAVRSNLDILIIVINNNGV--YHGLDESNFKKLKSHHKLPt 496
                   6678899****************************99*********************************99876..34444444444444322224 PP

                   ..BS----HHHHHHHTTSEEEEESSH.HHHHHHHHHHHHCSSSEEEEEE CS
  TPP_enzyme_C 107 ..dlkpvdfaklaealGakgarvekadveeleealkealekkgpaliev 153
                      ++ v++  ++ea+G  g+ v++a   el+ a++   e+k ++li+v
    EPX74218.1 497 taLSPAVRYDLICEACGGAGYFVTNA--HELKSAIQSSWERKTTCLINV 543
                   557*******************9999..***********9999999987 PP

>> zinc-ribbons_6  zinc-ribbons
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   6.3e-05      0.28      42      62 ..     509     529 ..     496     534 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 6.3e-05
                     EEETTEEEE--TTTT----TT CS
  zinc-ribbons_6  42 lkaCgavdyfCnkcneLiSkk 62 
                     ++aCg ++yf  +++eL+S  
      EPX74218.1 509 CEACGGAGYFVTNAHELKSAI 529
                     89****************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (567 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       496  (0.0276647); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.23s 00:00:00.80 Elapsed: 00:00:00.40
# Mc/sec: 4248.66
//
Query:       EPX74219.1  [L=489]
Description: nucleotide pyrophosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.3e-90  303.8   2.3    2.7e-90  303.5   2.3    1.1  1  Phosphodiest  Type I phosphodiesterase / nucleotide pyrophosp
      1e-07   31.7   0.2     0.0006   19.3   0.0    2.3  2  Sulfatase     Sulfatase


Domain annotation for each model (and alignments):
>> Phosphodiest  Type I phosphodiesterase / nucleotide pyrophosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  303.5   2.3     3e-94   2.7e-90       1     357 []      78     406 ..      78     406 .. 0.95

  Alignments for each domain:
  == domain 1  score: 303.5 bits;  conditional E-value: 3e-94
                   EEEEEETT-BTTHHHHHGSTSHHHHHHHHHSEEESEEE-SSS-SHHHHHHHHHHSS-HHHHS--SSSEEETTTTEEEEEETTTTGG...GGGCTT.S CS
  Phosphodiest   1 vlvislDGlradlldrlaellpnlaaLakegvsapnlrpvfPtlTfpnhaslvTGlyPgeHGivgNtfydrktgeyvvfvtededa...prwwqg.e 93 
                   v++islDG+rad+++r  +++pnl +La++  +ap+++pvfP++Tfpnh+sl+TGlyP++HG+v+N+fyd+ tg+   fv+++++    p ww++ e
    EPX74219.1  78 VIMISLDGFRADYIYR--GHTPNLLRLAENNAHAPYMIPVFPSITFPNHYSLATGLYPENHGMVSNNFYDPITGK--YFVNTRPECnrdPVWWTQaE 170
                   79**************..*********************************************************..688888888889****999* PP

                   -HHHHHHHTHTTCEEEESETTTTSEBTTCT.SC.TBHHSBTCT.CSTTSCHHHHHHHHHHHHHHHCHTHSHHHHHCTSSESEEEEEECCCHHHHHHH CS
  Phosphodiest  94 piwdtaakarglkaaalfwpgsevdystyyylvsetppryleddfnakvpledkvdkavlqtwldaafakvvlekelekpdlllvyleetDtvgHkf 190
                   piw +a++   +++a+++wpg ev+++       +++p+y+   fna+ +l  k+++ +l  wld  +          +p+ll++y++++D+vgH f
    EPX74219.1 171 PIWINAERH-SVRSAVHMWPGNEVPHH-------GIRPSYY-TSFNASATLKAKKNE-LL-HWLDHTDD--------TRPQLLMCYVPHVDSVGHTF 248
                   *********.*****************.......******9.78************8.88.8***9995........8******************* PP

                   -TTSHHHHHHHHHHHHHHHHHHHHHHHTTGTTTEEEEEEES---EEEHTTSEEEGGGTSTGGHGEEEEECBHHS.SSEEEEEESTEEE.CCCTTHHH CS
  Phosphodiest 191 GpdspevedalrrvDkaigdLlealderglsaetniilvSDHGmadvsddkvielndlleekgllhlkdegkggakaliainpkarelnrvaeaeae 287
                   Gpdsp+++  l++vD+++gdLle+l +r+l++ +n+i vSDHGma++s+d+++ l+dl++ + + + +d++     +l++++ +        e +  
    EPX74219.1 249 GPDSPQLNLMLKEVDQMVGDLLEGLNKRNLQDVVNLIFVSDHGMAPTSNDRLLWLDDLFNVS-KVEFRDGW-----PLAGFRGE-------SESDET 332
                   *************************************************************9.9*******.....********.......888888 PP

                   HHHHHHHTCHHCCHSTHTT.TEEEEEGGGS-GGGCH..STTS-SEEEEE-TTEEEESSTTCS...SBS-SEE--SS CS
  Phosphodiest 288 evyaelkakleelrkkege.alavylkeaipkrlhy..kkrapdlvlvadpgwsitskdkpd...eyeikgthGyd 357
                   + ++ lk++ ++ +  +g  +++  +ke++p  lhy  ++r+ ++++v+dpgwsi+s+  +    eye+ g hGyd
    EPX74219.1 333 YIADSLKNATSKAL--PGTkHWKSSRKEEMPDSLHYskNNRIAPVWMVPDPGWSIVSSLDHSpdvEYEPYGVHGYD 406
                   88888888866544..6777****************877*******************99989************8 PP

>> Sulfatase  Sulfatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.0   3.2e-05      0.29       1      71 [.      76     142 ..      76     157 .. 0.79
   2 !   19.3   0.0   6.7e-08    0.0006     217     253 ..     258     294 ..     195     355 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 3.2e-05
                 EEEEEEEESSE-TTGSGGGTTTSCSSHHHHHHHHTSEEESSEE.-SSSSHHHHHHHHHHSS-HHHHTHSSCC CS
   Sulfatase   1 pnvvliladdlgagdlglyggktattpnldrlaeeglrftnfy.saaplcspsraalltgryphnsgvasnt 71 
                 p+v+ i +d ++a++  + g+    tpnl rlae+      ++ +  + + p   +l tg+yp+n+g++sn+
  EPX74219.1  76 PTVIMISLDGFRADY-IYRGH----TPNLLRLAENNAHAPYMIpVFPSITFPNHYSLATGLYPENHGMVSNN 142
                 789999999998855.33343....889999997776666666655569********************997 PP

  == domain 2  score: 19.3 bits;  conditional E-value: 6.7e-08
                 HHHHHHHHHHHHHHHHHHTTTGGGEEEEEEESSSSCC CS
   Sulfatase 217 sveyvDdligrvlaaLeenglldntlvvftSDhgasl 253
                 ++++vD+++g++l+ L + +l d + ++f+SDhg + 
  EPX74219.1 258 MLKEVDQMVGDLLEGLNKRNLQDVVNLIFVSDHGMAP 294
                 689*******************************866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (489 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       374  (0.0208601); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3398.28
//
Query:       EPX74220.1  [L=255]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.7e-20   73.5   0.0    2.7e-20   72.8   0.0    1.3  1  Pyridox_oxase_2  Pyridoxamine 5'-phosphate oxidase
  ------ inclusion threshold ------
       0.15   12.2   0.0       0.59   10.3   0.0    1.9  2  Putative_PNPOx   Pyridoxamine 5'-phosphate oxidase


Domain annotation for each model (and alignments):
>> Pyridox_oxase_2  Pyridoxamine 5'-phosphate oxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.8   0.0     3e-24   2.7e-20       3      99 ..       4     121 ..       2     122 .. 0.92

  Alignments for each domain:
  == domain 1  score: 72.8 bits;  conditional E-value: 3e-24
                      TTHHHHHHHHHHT....T-GGGGEEEEEEE-.T.TS-EEEEEEE---B-TT.........SS-.EEEEEETTSHHHHHHH...........H-- CS
  Pyridox_oxase_2   3 pWrsllesalkkn....kkkkstefqlaTvd.eeegkPrvRtvvfRgfleekke......esdvltfttDvrseKvkqles..........sna 75 
                       W++ l + lk+n       + +++qlaT+  e +++Pr+Rtv++Rgfl++ +e       +d+l f+tDv s+K+k+++            ++
       EPX74220.1   4 DWKTKLIKLLKENsdssGLLHPEYMQLATLPsEGDKYPRNRTVAIRGFLNSGWEidkndlDTDLLVFSTDVESQKAKDISLrqakstptgpMHN 97 
                      7999999999999766566789*********777888**************9978999999******************9999******9989* PP

                      EEEEEEEETTTTEEEEEEEEEEEE CS
  Pyridox_oxase_2  76 aveavfylketreQfRisGkafvi 99 
                      ++e++ +l++t++Q R+ G+++++
       EPX74220.1  98 TFELCSWLPKTMQQVRLWGQIWFY 121
                      ********************9976 PP

>> Putative_PNPOx  Pyridoxamine 5'-phosphate oxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   6.6e-05      0.59      11      56 ..      24      82 ..      11      86 .. 0.85
   2 ?   -2.4   0.0      0.63   5.6e+03      33      49 ..     111     125 ..     106     128 .. 0.59

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 6.6e-05
                    HSSEEEEEEEE..TTSEEEEEEEEEEEETTT............TEEEEEEETTSHHHHHH CS
  Putative_PNPOx 11 eskavvlATvd..edGrPnvspvllkagdgr............dgivfatnadsrklrnl 56
                     ++++ lAT     d +P  ++v    g+              d++vf+t+ +s+k++++
      EPX74220.1 24 HPEYMQLATLPseGDKYPRNRTVAIR-GFLNsgweidkndldtDLLVFSTDVESQKAKDI 82
                    5799*****66447889999999988.55556999***********************98 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.63
                     EEEETTTTEEEEEEETT CS
  Putative_PNPOx  33 lkagdgrdgivfatnad 49 
                      +++ g+  i+f+t   
      EPX74220.1 111 QVRLWGQ--IWFYTPDL 125
                     4445555..77877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       422  (0.0235373); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1822.96
//
Query:       EPX74221.1  [L=295]
Description: histidine-containing response regulator phosphotransferase Mpr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-12   47.8   0.0    2.4e-12   46.9   0.0    1.5  1  Hpt       Hpt domain
  ------ inclusion threshold ------
       0.04   13.0   0.6        1.8    7.6   0.1    2.1  2  DUF3516   Domain of unknown function (DUF3516)


Domain annotation for each model (and alignments):
>> Hpt  Hpt domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.9   0.0   2.7e-16   2.4e-12       5      73 ..     193     264 ..     189     288 .. 0.81

  Alignments for each domain:
  == domain 1  score: 46.9 bits;  conditional E-value: 2.7e-16
                 HHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHHH...HCTSCHHHHHHHH CS
         Hpt   5 lfleeaeelleqleqaldqedlqelaraaHtLKGsagmlGltelaelahelEdlld...ragelelepelle 73 
                  ++e+ae+ +++l+ al+q+dl++l ++ H LKGs++ lGlte++ ++++++++     r+g l +  e+++
  EPX74221.1 193 NYFEQAETTIKELHGALKQKDLKKLSSLGHFLKGSSAALGLTEMKNVCERIQNYGAlrsRDGALTVPSEEIA 264
                 689**************************************************5556355555555555544 PP

>> DUF3516  Domain of unknown function (DUF3516)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.1    0.0002       1.8      84     119 ..       9      44 ..       4      55 .. 0.88
   2 ?    3.9   0.1    0.0026        23     351     394 ..     156     200 ..      91     214 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0002
     DUF3516  84 dnhesrakqrklirraieifrsLleagvverleeed 119
                 +n+e+r+++r+ + ra++++r+L ++g+ e+++++ 
  EPX74221.1   9 RNTENRTSKRNEQIRAASLARTLQSSGIAEKARSPS 44 
                 799***************************988876 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.0026
     DUF3516 351 vRnalfrrvellarekeeelaeldeedaeeweea.ldayfdehde 394
                   + +f++ +++++   ++l e+d++d++e+++  + +yf++ ++
  EPX74221.1 156 FDDDVFQKPQMIDHTTFDQLLEMDDDDQHEFSKSiVFNYFEQAET 200
                 56789999******************9999986515689988764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (295 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       787  (0.0438954); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.29s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 1888.11
//
Query:       EPX74222.1  [L=440]
Description: aspartate aminotransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.7e-84  281.6   0.0    1.1e-83  281.4   0.0    1.0  1  Aminotran_1_2  Aminotransferase class I and II


Domain annotation for each model (and alignments):
>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  281.4   0.0   6.2e-88   1.1e-83       2     363 .]      68     434 ..      67     434 .. 0.98

  Alignments for each domain:
  == domain 1  score: 281.4 bits;  conditional E-value: 6.2e-88
                    EEEESSSSSTTSTTSS.HHHHHHHHHHHHHHHHHTSTTST-BTTHHHHHHHHHHHHHC.TCTTCHTTGGEGEEEESHHHHHHHHHHHHHHHTTT-E CS
  Aminotran_1_2   2 dvinLgsneylgdsgk.ptlpevakaekegalaggtlneygpidglpeleealakflg.rseklklkreaavvvgsGagaliealifllklnpgde 95 
                    +++nLg+++y++d+gk ++lp+v+ ae e +l++   +ey+ i+g   ++e+ ++ +  + +    +r +a +  sG+gal+    f+ k+ p+ +
     EPX74222.1  68 KKMNLGVGAYRDDAGKpYVLPSVRTAETE-ILKQDLDKEYLSITGDNGFREEATRMAYgDVYDSIRNRLVAAQSVSGTGALLLSSRFFSKFYPSND 162
                    79***************************.************************999988888888888899************************ PP

                    EEEEESS-THHHHHHHHTTSEEEEEEBEETTTTEE-HHHHHHHHTTHHCTTETEEEEEEESS-TTT--B--HHHHHHHHHHHHHTTEEEEEEETTT CS
  Aminotran_1_2  96 ilvpdptyasyknilrlsggevvryplyseedfhldlealeealkeapegnkktkvilvesphNPtGtvatleeleklldlakkynlllfvDeaYa 191
                    i++++pt++++kn++ ++g+ + +y++y++ + +ld+e+++++l++ap  ++   v+l++++hNPtG++++++++ ++l+++++++++++ D+aY+
     EPX74222.1 163 IYISNPTWGNHKNVFSNAGLNIKEYRYYNPVTKGLDIEGMLTDLSKAPNSSI---VLLHACAHNPTGVDPSHAQWNDILRVVREKGHFVLMDMAYQ 255
                    ****************************************************...***************************************** PP

                    TCBSSSS..HTHHHHGGSTTSTTEEEEEESSSTTSSGGG-EEEEEE.EH......HHHHHHHHHHHHHTS..SHHHHHHHHHHHHHHHHHHH...H CS
  Aminotran_1_2 192 gfvfgsl..davatranveeepnllivgslsKafGlaGeRvGyilg.na......avvsqlrklsrpfls..ssllqaavaaalsdallkqs...e 273
                    gf++g+   da+at +++++ + +++++s++K++Gl+GeRvG++++ +a      ++ sql++l+r+ +s  + +++++++ +l++++l+++   e
     EPX74222.1 256 GFASGNFarDAYATQLFASNNVPMFLCQSFAKNMGLYGERVGCFSSlTAspeeaaRFESQLKILVRASYSnpPVHGARIASFILKNSDLRAQwagE 351
                    ******9***************************************877*********************************************** PP

                    HHHHHHHHHHHHHHHHHHHHHS.....TEEEECCSCSSEEEEEETHHCHHHHHHH..HHHTCTEEEEEGGGGTSTTEEEEECTTS-HHHHHHHHHH CS
  Aminotran_1_2 274 leemrqrlqkrrkelrdeLael.....glkvlasqsgmflltdlsaetakelskk..LleevgvyvtpgtsftvpgrlRitvAglteeeleelvea 362
                    ++ m++r++++r++lr+ L+++     g+k+++ q+gmf++t+l++e      ++  L   +++y+t+        ++Ri++Ag +++++++l+ea
     EPX74222.1 352 VKGMASRIISMRQTLRSILENDlkskhGWKHITDQIGMFCYTGLKPE------QVetLSRDYHIYLTK--------NGRISIAGINTSNVRYLAEA 433
                    *******************999*************************......777799999******........9******************9 PP

                    H CS
  Aminotran_1_2 363 l 363
                    +
     EPX74222.1 434 I 434
                    8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (440 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       338  (0.0188521); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 3058.86
//
Query:       EPX74223.1  [L=406]
Description: hypothetical protein SOCG_03435 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-41  139.8   1.2    5.1e-13   48.6   0.0    3.2  3  KH_1      KH domain
    2.8e-12   46.3   0.3    0.00057   19.7   0.0    3.5  3  KH_2      KH domain
    1.3e-06   28.1   0.3       0.98    9.3   0.1    3.4  3  KH_4      KH domain
    0.00054   20.0   0.5         25    5.1   0.0    4.3  4  KH_5      NusA-like KH domain
  ------ inclusion threshold ------
      0.095   12.4   0.0       0.15   11.8   0.0    1.4  1  PYC_OADA  Conserved carboxylase domain


Domain annotation for each model (and alignments):
>> KH_1  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.6   0.0   4.5e-14   1.6e-10       3      65 ..      90     152 ..      88     153 .. 0.89
   2 !   48.0   0.1   2.3e-16   8.1e-13       5      66 .]     189     250 ..     187     250 .. 0.90
   3 !   48.6   0.0   1.4e-16   5.1e-13       2      64 ..     274     336 ..     273     338 .. 0.89

  Alignments for each domain:
  == domain 1  score: 40.6 bits;  conditional E-value: 4.5e-14
                 EEEEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEESSTT....T.-EEEEEESHHHHHHHHHHHH CS
        KH_1   3 rilvPsslvgriIGkgGsnIkeIreetgakIkvpksedeg.sderevtisGspeavekAkelie 65 
                 +++v+s +vg +IGk+G++++++++ t+++++++ +e  +  +er+  i+G  ++++ ++++i+
  EPX74223.1  90 SFPVKSCYVGMLIGKRGEKLQKMESATKTRVQFM-PETTSkPGERTAIITGQTDNIDMCRREIS 152
                 56777779**************************.6666679*********9999******997 PP

  == domain 2  score: 48.0 bits;  conditional E-value: 2.3e-16
                 EEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEESSTT.....T.-EEEEEESHHHHHHHHHHHHH CS
        KH_1   5 lvPsslvgriIGkgGsnIkeIreetgakIkvpksedeg..sderevtisGspeavekAkeliee 66 
                  +P +++g++IGkgG++I++++e t +kI +   +  +  ++ r v  +Gspe+v +Ak  i++
  EPX74223.1 189 VIPEHHIGLVIGKGGEKIRDLQETTDTKIIIN-TDT-DlmNPLRPVSFQGSPERVSRAKSIIQD 250
                 79*********************88*****76.444.4489******************99985 PP

  == domain 3  score: 48.6 bits;  conditional E-value: 1.4e-16
                 EEEEEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEESSTT....T.-EEEEEESHHHHHHHHHHH CS
        KH_1   2 lrilvPsslvgriIGkgGsnIkeIreetgakIkvpksedeg.sderevtisGspeavekAkeli 64 
                  ++ vP++ +g iIG+gG++++eI ++t ++ k+  ++ ++  +ere+t +G+p +ve Ak  +
  EPX74223.1 274 DVMAVPRESAGMIIGRGGETVREIYAKTMCQLKIS-PDGGPsVPEREITFIGTPSSVELAKWDV 336
                 5789*****************************87.4444479*****************9766 PP

>> KH_2  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.0   6.1e-05      0.22      36      59 ..      98     121 ..      91     127 .. 0.86
   2 !   19.7   0.0   1.6e-07   0.00057      29      58 ..     188     217 ..     187     227 .. 0.88
   3 !   11.0   0.1   8.1e-05      0.29      35      52 ..     282     299 ..     270     308 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 6.1e-05
                 HHHHHTGGGHHHHHHHHHHHHHHH CS
        KH_2  36 pgivIGkgGsnikkigkelrkdie 59 
                  g++IGk+G++++k++++ + +++
  EPX74223.1  98 VGMLIGKRGEKLQKMESATKTRVQ 121
                 79***************9999885 PP

  == domain 2  score: 19.7 bits;  conditional E-value: 1.6e-07
                 EEEEESCHHHHHTGGGHHHHHHHHHHHHHH CS
        KH_2  29 iviresqpgivIGkgGsnikkigkelrkdi 58 
                 +vi e + g+vIGkgG++i+ ++++   +i
  EPX74223.1 188 FVIPEHHIGLVIGKGGEKIRDLQETTDTKI 217
                 688999******************999888 PP

  == domain 3  score: 11.0 bits;  conditional E-value: 8.1e-05
                 CHHHHHTGGGHHHHHHHH CS
        KH_2  35 qpgivIGkgGsnikkigk 52 
                   g++IG+gG+++++i +
  EPX74223.1 282 SAGMIIGRGGETVREIYA 299
                 57************9965 PP

>> KH_4  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.0    0.0016       5.7      32      52 ..      90     110 ..      82     116 .. 0.82
   2 !    7.9   0.0   0.00076       2.7      37      55 ..     192     210 ..     188     216 .. 0.86
   3 !    9.3   0.1   0.00027      0.98       6      51 ..     246     294 ..     242     297 .. 0.61

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0016
        KH_4  32 elnvegedlGrvIGkrGrtld 52 
                    v++  +G +IGkrG+ l+
  EPX74223.1  90 SFPVKSCYVGMLIGKRGEKLQ 110
                 556777889********9876 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.00076
        KH_4  37 gedlGrvIGkrGrtldAlq 55 
                 ++++G+vIGk G+ ++ lq
  EPX74223.1 192 EHHIGLVIGKGGEKIRDLQ 210
                 6789*********998776 PP

  == domain 3  score: 9.3 bits;  conditional E-value: 0.00027
        KH_4   6 dilkalvddpeevevtee.eeeeeveielnv...egedlGrvIGkrGrtl 51 
                 +i++ +v  +e+++++   ++++ ++++ +v     e  G +IG+ G+t+
  EPX74223.1 246 SIIQDIV-IQEQLKINSLsTTSNPNKVHTDVmavPRESAGMIIGRGGETV 294
                 5666666.455666655444444444433322127788**********98 PP

>> KH_5  NusA-like KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0     0.022        80      19      43 ..      98     121 ..      91     127 .. 0.80
   2 ?    2.0   0.0     0.064   2.3e+02       1      25 [.     130     153 ..     130     163 .. 0.83
   3 !    5.1   0.0    0.0069        25      11      42 ..     192     217 ..     188     228 .. 0.78
   4 ?    3.9   0.0     0.016        57       7      35 ..     276     299 ..     272     302 .. 0.82

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.022
        KH_5  19 vGaivgkkGsrikavsseLkgekid 43 
                 vG ++gk+G++ ++ +s   +++++
  EPX74223.1  98 VGMLIGKRGEKLQKMESAT-KTRVQ 121
                 9************998876.66665 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.064
        KH_5   1 aGertkvaVkshnpnvdpvGaivgk 25 
                 +Gert +++ +++ n+d ++  + +
  EPX74223.1 130 PGERTAIITGQTD-NIDMCRREISQ 153
                 79**********9.***98776655 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.0069
        KH_5  11 shnpnvdpvGaivgkkGsrikavsseLkgeki 42 
                 +h+     +G ++gk+G++i+ + +   ++ki
  EPX74223.1 192 EHH-----IGLVIGKGGEKIRDLQETT-DTKI 217
                 556.....9************998877.7777 PP

  == domain 4  score: 3.9 bits;  conditional E-value: 0.016
        KH_5   7 vaVkshnpnvdpvGaivgkkGsrikavss 35 
                 +aV ++      +G i+g++G+ ++++  
  EPX74223.1 276 MAVPRES-----AGMIIGRGGETVREIYA 299
                 5666666.....9************9965 PP

>> PYC_OADA  Conserved carboxylase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   4.2e-05      0.15      82     154 ..      95     171 ..      55     216 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 4.2e-05
                 HHHHHHHTTSS---SS---HHHHHHHHT.-----S-GGGG.....---.-HHHHHHHTTTTSSSHHHHHHHHHSHHHH CS
    PYC_OADA  82 dsvvdllkGelGkppggfpeelvkkvlkgeepitsrpads.....lepedleklrkeleekakteedvlsyalypkva 154
                 + +v++l G+ G+   +++ +  ++v +  e  ts+p++       +  +++ +r+e+++k+k+ +dvl+++++p+ a
  EPX74223.1  95 SCYVGMLIGKRGEKLQKMESATKTRVQFMPET-TSKPGERtaiitGQTDNIDMCRREISQKIKDYQDVLTATAFPALA 171
                 55899**********************98777.9999999898763344699***********************865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (406 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       468  (0.026103); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.51u 0.30s 00:00:00.81 Elapsed: 00:00:00.52
# Mc/sec: 2336.62
//
Query:       EPX74224.1  [L=448]
Description: 19S proteasome regulatory subunit Rpt2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-41  142.1   0.0    2.5e-41  141.2   0.0    1.5  1  AAA              ATPase family associated with various cellul
    4.1e-10   39.4   0.0    9.4e-10   38.3   0.0    1.6  1  Prot_ATP_ID_OB   Proteasomal ATPase OB C-terminal domain
    9.8e-10   38.1   0.2      2e-09   37.1   0.2    1.5  1  AAA_lid_3        AAA+ lid domain
    9.8e-07   29.0   0.0    2.3e-06   27.8   0.0    1.6  1  AAA_2            AAA domain (Cdc48 subfamily)
    3.7e-06   27.0   0.1    1.3e-05   25.2   0.1    2.0  1  AAA_5            AAA domain (dynein-related subfamily)
    1.1e-05   24.7   0.0    1.9e-05   24.0   0.0    1.3  1  DUF815           Protein of unknown function (DUF815)
    1.6e-05   25.2   0.6      0.018   15.3   0.1    2.6  2  AAA_22           AAA domain
    9.7e-05   22.8   1.0     0.0012   19.2   0.3    2.6  1  AAA_16           AAA ATPase domain
    0.00018   21.3   0.0    0.00036   20.3   0.0    1.5  1  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    0.00021   20.9   1.1    0.00047   19.7   0.0    2.2  1  Prot_ATP_OB_N    Proteasomal ATPase OB N-terminal domain
    0.00049   20.4   1.3     0.0013   19.0   0.0    2.2  2  AAA_28           AAA domain
     0.0023   17.3   0.8       0.49    9.7   0.1    2.6  3  ATPase           KaiC
     0.0044   17.2   0.1       0.02   15.0   0.0    1.9  1  AAA_33           AAA domain
     0.0059   16.6   0.1      0.029   14.4   0.0    2.0  2  AAA_14           AAA domain
  ------ inclusion threshold ------
      0.011   16.3   0.0      0.046   14.3   0.0    2.1  2  AAA_18           AAA domain
      0.014   15.1   0.0      0.028   14.1   0.0    1.4  1  IstB_IS21        IstB-like ATP binding protein
      0.015   15.0   0.1       0.78    9.4   0.0    2.2  2  Sigma54_activat  Sigma-54 interaction domain
       0.02   14.7   1.0       0.18   11.5   0.2    2.6  2  AAA_24           AAA domain
       0.02   14.7   0.0      0.052   13.4   0.0    1.7  1  AAA_3            ATPase family associated with various cellul
      0.027   14.9   0.0      0.094   13.1   0.0    2.0  1  RNA_helicase     RNA helicase
      0.028   13.9   0.1       0.18   11.3   0.1    2.0  1  AAA_7            P-loop containing dynein motor region
      0.043   13.0   0.0      0.088   12.0   0.0    1.4  1  TIP49            TIP49 P-loop domain
      0.056   12.8   0.0       0.11   11.9   0.0    1.4  1  Mg_chelatase     Magnesium chelatase, subunit ChlI
      0.072   13.1   0.0        0.2   11.7   0.0    1.7  1  DUF1128          Protein of unknown function (DUF1128)
       0.11   11.8   0.1       0.23   10.7   0.1    1.5  1  Zeta_toxin       Zeta toxin
       0.12   11.5   0.0       0.19   11.0   0.0    1.3  1  DUF2075          Uncharacterized conserved protein (DUF2075)
       0.16   11.9   1.0        0.6   10.0   0.1    2.3  3  NACHT            NACHT domain
       0.28   10.7   4.2        0.5    9.9   0.4    2.5  2  AAA_25           AAA domain
       0.39   10.4   2.2       0.39   10.4   0.4    2.0  2  AAA_30           AAA domain


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.2   0.0   4.1e-44   2.5e-41       1     131 [.     228     361 ..     228     362 .. 0.96

  Alignments for each domain:
  == domain 1  score: 141.2 bits;  conditional E-value: 4.1e-44
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHH...TTCCCHHHHHHHHHHHHHHHHT CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr...sgseseeeervvnqLlteldgv 96 
                 v+lyG pGtGKTllakava++++++fl++ gsel++ky+g++++ +r+lf++a+e++ psi+fiDEida++++r   ++++++e +r++ +Ll++ldg+
  EPX74224.1 228 VILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHS-PSIVFIDEIDAIGTKRyeaQSGAEREIQRTMLELLNQLDGF 325
                 79******************************************************9.****************887667788888999999******* PP

                 TTSSSTEEEEEEESSGGGSTHHHHS.TTSSEEEETT CS
         AAA  97 kkkeskvivigatnrpdkldpallr.gRfdrkieie 131
                 ++ ++++ vi+atnr+++ldpal+r gR+drki +e
  EPX74224.1 326 DTTNRDIKVIMATNRISDLDPALIRpGRIDRKILFE 361
                 *********************************986 PP

>> Prot_ATP_ID_OB  Proteasomal ATPase OB C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.3   0.0   1.5e-12   9.4e-10       1      55 [.     116     168 ..     116     169 .. 0.95

  Alignments for each domain:
  == domain 1  score: 38.3 bits;  conditional E-value: 1.5e-12
                     EEEEEEE-TTSSEEEEE-TTS-EEEEEE-GGGSSST--TTEEEEEETTTTEEEEE CS
  Prot_ATP_ID_OB   1 VatVsEvlddteraiVktssdeevvvslagavpremLrpgDlVavdkdtgfifEk 55 
                     V+t+ E++dd ++aiV t ++ e++vs+ + v+++mL pg +V+++ ++  i+ +
      EPX74224.1 116 VGTLEEIIDD-DHAIVST-AGPEYYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGI 168
                     9*********.*****99.*****************************9988866 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.1   0.2   3.2e-12     2e-09       1      44 [.     384     427 ..     384     428 .. 0.97

  Alignments for each domain:
  == domain 1  score: 37.1 bits;  conditional E-value: 3.2e-12
   AAA_lid_3   1 dvdlkeLAerTeGySGADlaalcreAallAlrrgikeitmedfe 44 
                 dv+l+eL +  +  SGA+++a++ eA+llAlr+ +  + medf+
  EPX74224.1 384 DVNLEELIQSKDELSGAEIKAIVSEAGLLALRERRMRVVMEDFR 427
                 9******************************************7 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.0   3.7e-09   2.3e-06       7     105 ..     229     321 ..     224     345 .. 0.86

  Alignments for each domain:
  == domain 1  score: 27.8 bits;  conditional E-value: 3.7e-09
                 EEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTS..EEEEETGGG-------------HHHHHHHHHHH CS
       AAA_2   7 lllgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG..ivllDEidKihpkessgadvSregVqrdLLqil 103
                 +l g  g+Gkt+laka+a+  ++    ++ r+  sel++    + l +     ++  ++aee+   iv++DEid i  k+ + +   + ++qr +L +l
  EPX74224.1 229 ILYGAPGTGKTLLAKAVANQTSA----TFLRVVGSELIQ----KYLGDGPRLVRQLFNAAEEHSpsIVFIDEIDAIGTKRYEAQSGAEREIQRTMLELL 319
                 5668889*************996....************....99999999999999999999999************988888888999********9 PP

                 H- CS
       AAA_2 104 eg 105
                  +
  EPX74224.1 320 NQ 321
                 75 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.1   2.2e-08   1.3e-05       1     136 [.     227     350 ..     227     350 .. 0.79

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 2.2e-08
                 EEEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------..G-SEEEEESGGG--HHHHHHHHHHHHSSEEE.. CS
       AAA_5   1 dvlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar..egeilvlDEveraesevlnsLlslleerrllle 97 
                 +v+L G+pGtgK+ la+ +a  + ++++ v +++      l++++   +++ +lv   l +aa+  +++i+++DE++ + ++  ++      e ++ + 
  EPX74224.1 227 GVILYGAPGTGKTLLAKAVANQTSATFLRVVGSE------LIQKYL--GDGPRLV-RQLFNAAEehSPSIVFIDEIDAIGTKRYEAQSGAEREIQRTML 316
                 59*****************************988......666666..4444444.56666888899*************9999999988777776666 PP

                 -SSSEEE---......-EEEEEESS--.-TT-TTHHHHT CS
       AAA_5  98 eggelvkaknddllerfrviatanpldrslnelspalrs 136
                 e+ ++ +   +   +++ vi+++n+ +    +l+pal++
  EPX74224.1 317 ELLNQLDGFDT-TNRDIKVIMATNRIS----DLDPALIR 350
                 65554443322.344499999999999....88888875 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.0     3e-08   1.9e-05      51     116 ..     223     293 ..     180     314 .. 0.86

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 3e-08
      DUF815  51 lpannvLLwGarGtGKSslvkallneyaeegLrli..evekedlkelpklvellr...erperfilfvDDL 116
                 +p + v+L+Ga GtGK  l ka+ n+++++ Lr++  e+ ++ l + p+lv++l    e++   i+f+D +
  EPX74224.1 223 KPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVgsELIQKYLGDGPRLVRQLFnaaEEHSPSIVFIDEI 293
                 567889*****************************888999************972224445679999975 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.1   2.9e-05     0.018       8      29 ..     228     249 ..     223     257 .. 0.87
   2 !    8.5   0.1    0.0038       2.4      53     127 ..     250     336 ..     248     343 .. 0.72

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 2.9e-05
      AAA_22   8 lvvtGesGtGKTtllrrlleql 29 
                 ++++G +GtGKT+l++ +++q 
  EPX74224.1 228 VILYGAPGTGKTLLAKAVANQT 249
                 689****************997 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0038
      AAA_22  53 skdllrellralglelkaerlsseellealeqalraravielliiDEaqhlr....s..........eealeeLrsllnl..srkgvqliL 127
                 s+++lr + ++l ++  +   +  +l+++l +a+++++  +++ iDE++ +     +           ++le L +l  +     ++++i+
  EPX74224.1 250 SATFLRVVGSELIQKYLG---DGPRLVRQLFNAAEEHSP-SIVFIDEIDAIGtkryEaqsgaereiqRTMLELLNQLDGFdtTNRDIKVIM 336
                 556666666666655555...888999999999999999.***********8765515567777888888888877766555556666655 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.3     2e-06    0.0012      24      88 ..     225     279 ..     195     322 .. 0.59

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 2e-06
      AAA_16  24 pelvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipysalaqalareellrqllde 88 
                 p  v+l+G++G+GK+ l+++++++ +++   flr    +l     y+         +l+rql ++
  EPX74224.1 225 PKGVILYGAPGTGKTLLAKAVANQTSAT---FLRVVGSEL--IQKYLGDGP-----RLVRQLFNA 279
                 499*******************977766...666666665..222322111.....344444444 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   5.8e-07   0.00036      35      98 ..     227     298 ..     202     312 .. 0.76

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 5.8e-07
      RuvB_N  35 hvllyGpPGlGkttlakiiakelgvkl.kitsgPvleka.gd...laalltnleek...dvlfideihrlsr 98 
                  v+lyG+PG Gkt lak +a++  +++ ++  +  ++k  gd   l+  l n  e+    ++fidei  + +
  EPX74224.1 227 GVILYGAPGTGKTLLAKAVANQTSATFlRVVGSELIQKYlGDgprLVRQLFNAAEEhspSIVFIDEIDAIGT 298
                 699*******************998752666677787743563334444444333223369*****987755 PP

>> Prot_ATP_OB_N  Proteasomal ATPase OB N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   7.6e-07   0.00047       1      55 [.     115     169 ..     115     174 .. 0.89

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 7.6e-07
  Prot_ATP_OB_N   1 tyGtflavnsqdgtadVlvggrrmrVavsPlvdaeeLrpGqeVlLn.EalvvVeal 55 
                    ++Gt+ ++  +d++a V+++g ++ V++   vd + L+pG  VlL   a+ +V+ l
     EPX74224.1 115 SVGTLEEII-DDDHAIVSTAGPEYYVSIMSFVDKDMLEPGCSVLLHhKAMSIVGIL 169
                    579999999.8**********************************72578888866 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.2       2.6   1.6e+03     118     139 ..      82     103 ..      63     116 .. 0.63
   2 !   19.0   0.0   2.1e-06    0.0013       2      44 ..     228     275 ..     227     366 .. 0.72

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 2.6
      AAA_28 118 apeidddgeRredleereaide 139
                 ++e+++++eR + ++er++ ++
  EPX74224.1  82 EEEYVQNQERLKPQDERTQEER 103
                 3455588888666666665544 PP

  == domain 2  score: 19.0 bits;  conditional E-value: 2.1e-06
      AAA_28   2 ivitGgestGKTtlleaLaar....gypvv.pEaareileeklakged 44 
                 +++ G+++tGKT l++a a++      +vv  E   ++l ++ +  ++
  EPX74224.1 228 VILYGAPGTGKTLLAKAVANQtsatFLRVVgSELIQKYLGDGPRLVRQ 275
                 789****************77565567788888888888777644433 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       7.5   4.6e+03     201     221 ..     105     125 ..      84     131 .. 0.67
   2 !    9.7   0.1   0.00079      0.49      14      38 ..     220     244 ..     193     253 .. 0.82
   3 ?    5.5   0.0     0.015       9.5     104     154 ..     269     322 ..     255     329 .. 0.77

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 7.5
      ATPase 201 eivkmRgtkhskkehpfeIte 221
                 +++ +Rgt++s  +++  I++
  EPX74224.1 105 RVDEIRGTPMSVGTLEEIIDD 125
                 677888888888887777777 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00079
      ATPase  14 gGipegrvvlitGepGtGKtifalq 38 
                  Gi   + v ++G pGtGKt++a+ 
  EPX74224.1 220 MGIKPPKGVILYGAPGTGKTLLAKA 244
                 6888888899************975 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.015
      ATPase 104 leelieelaeaikeikakrvviDsitgl...ayeekeavaReilrqlvrvlkkl 154
                    l+++l +a +e   + v iD i+++    ye+++   Rei r++++ l++l
  EPX74224.1 269 GPRLVRQLFNAAEEHSPSIVFIDEIDAIgtkRYEAQSGAEREIQRTMLELLNQL 322
                 567999999***************999874446677777788777777777665 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   3.3e-05      0.02       2      29 ..     228     255 ..     228     288 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 3.3e-05
      AAA_33   2 vllvGlpGsGKstlaerllkklgavlls 29 
                 v+l G+pG+GK+ la+ +++++ a++l+
  EPX74224.1 228 VILYGAPGTGKTLLAKAVANQTSATFLR 255
                 7899***************999955544 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0         3   1.8e+03      63      90 ..      99     126 ..      69     135 .. 0.64
   2 !   14.4   0.0   4.7e-05     0.029       5      76 ..     228     296 ..     225     337 .. 0.73

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 3
      AAA_14  63 ekktylflDEiqevpewekalkslvdeg 90 
                  +++    DEi   p    +l +++d++
  EPX74224.1  99 TQEERNRVDEIRGTPMSVGTLEEIIDDD 126
                 3344455788888888888888888877 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 4.7e-05
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelileklkeekktylflDEiqev 76 
                 +++ Ga  +GKT l+k ++++       +l +   +  +k l d  +l + +++ ++e+  +++f+DEi  +
  EPX74224.1 228 VILYGAPGTGKTLLAKAVANQTS---ATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAI 296
                 899***************98877...777777666655555555435666666665567899*******987 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       5.1   3.1e+03      30      69 ..      74     111 ..      66     139 .. 0.68
   2 ?   14.3   0.0   7.5e-05     0.046       1      25 [.     228     273 ..     228     365 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 5.1
      AAA_18  30 dvakenglllevdpealdeskrldedkldklldaleenss 69 
                  ++ +  +++e+ ++  +e ++ +++++++  + ++e++ 
  EPX74224.1  74 RIHDHLLMEEEYVQN--QERLKPQDERTQEERNRVDEIRG 111
                 556666666666666..77777777777777776666655 PP

  == domain 2  score: 14.3 bits;  conditional E-value: 7.5e-05
      AAA_18   1 IlltGtpGvGKttlakeLskrl.gf....................g 25 
                 ++l G+pG+GKt lak++++ + +                     +
  EPX74224.1 228 VILYGAPGTGKTLLAKAVANQTsATflrvvgseliqkylgdgprlV 273
                 79****************9986332666665444444444444444 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   4.6e-05     0.028      46      73 ..     224     251 ..     210     264 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 4.6e-05
   IstB_IS21  46 kkenivllGpsGvGKshlaialgveavr 73 
                   ++++l G +G+GK+ la a++ ++ +
  EPX74224.1 224 PPKGVILYGAPGTGKTLLAKAVANQTSA 251
                 56789*****************998765 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.0    0.0013      0.78      23      47 ..     226     250 ..     214     263 .. 0.84
   2 ?    3.1   0.0      0.11        70      94     143 ..     285     340 ..     275     351 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0013
                      S-EEEECSTTSSHHHHHHHHHHHST CS
  Sigma54_activat  23 lsvlitGesGtGKellaraiheask 47 
                        v++ G  GtGK+lla+a+ ++++
       EPX74224.1 226 KGVILYGAPGTGKTLLAKAVANQTS 250
                      6799***************988655 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.11
                      TSEEEEETGGGS...-HHHHHHHHHHHHHSEEESBT...SSSEEE--EEEEEEESS CS
  Sigma54_activat  94 gGtlfLDeigel...plelQekLlrvlqegevervG...sskeikvdvriiaatne 143
                       +++f+Dei  +    +e+Q+   r +q+  +e +    + ++++ d+++i+atn+
       EPX74224.1 285 PSIVFIDEIDAIgtkRYEAQSGAEREIQRTMLELLNqldGFDTTNRDIKVIMATNR 340
                      5688999987772224678999999999988765541115679999********97 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.2   0.00028      0.18       5      24 ..     228     249 ..     225     336 .. 0.69
   2 ?    0.5   0.0       0.7   4.3e+02     126     187 ..     371     438 ..     363     442 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00028
      AAA_24   5 iliyGpsgiGKTtlakel..gp 24 
                 +++yG +g+GKT lak    + 
  EPX74224.1 228 VILYGAPGTGKTLLAKAVanQT 249
                 789************9986433 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.7
      AAA_24 126 ifiahektrkdedpegeakytrlepklgkktanelkeevDlvlranlkred.........kvgervlktsk 187
                 if+ h+ + + +++        l+++ ++ +++e+k +v + + + l++           +  e+vlkt++
  EPX74224.1 371 IFTIHTSKMNLGED---VNLEELIQSKDELSGAEIKAIVSEAGLLALRERRmrvvmedfrQAREKVLKTKD 438
                 67777777777766...345789999999999999999999999999876689999999999999999886 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   8.3e-05     0.052       2      30 ..     228     256 ..     227     268 .. 0.92

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 8.3e-05
       AAA_3   2 vllegvPGlaktllvkalakaldlefkri 30 
                 v+l g+PG++ktll+ka+a++ +++f r+
  EPX74224.1 228 VILYGAPGTGKTLLAKAVANQTSATFLRV 256
                 7899**********************998 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   0.00015     0.094       1      26 [.     228     253 ..     228     314 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 0.00015
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkkl 26 
                   ++lyG++g+GK++lak +a++ + ++
    EPX74224.1 228 VILYGAPGTGKTLLAKAVANQTSATF 253
                   689**************777766544 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   0.00029      0.18      32     121 ..     224     305 ..     216     339 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00029
       AAA_7  32 nkkpvllvGptGtGKtviikdllkkldkekylsltinfsaqtsanqlqdiiesklekrrkgvygPpggkklvvFvDDlnmpakekygaqp 121
                   k v+l+G  GtGKt+++k + ++ +         +f     ++ +q+ + +     r+    +  +   +vF+D+++     +y+aq+
  EPX74224.1 224 PPKGVILYGAPGTGKTLLAKAVANQTS--------ATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYEAQS 305
                 56789****************999888........4555556666666666666655555555555566666777777666666666665 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00014     0.088      51      89 ..     226     262 ..     213     279 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00014
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  51 ravLlaGpsgtGktalaiaiskelgedvpfvalsgsevy 89 
                 ++v+l G +gtGkt la a++++ +    f  ++gse+ 
  EPX74224.1 226 KGVILYGAPGTGKTLLAKAVANQTS--ATFLRVVGSELI 262
                 89*******************9977..789999999986 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00018      0.11      25      43 ..     228     246 ..     222     255 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00018
  Mg_chelatase  25 lllvGppGsGKtmlakrlp 43 
                   ++l+G+pG+GKt+lak+++
    EPX74224.1 228 VILYGAPGTGKTLLAKAVA 246
                   79*************9975 PP

>> DUF1128  Protein of unknown function (DUF1128)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00032       0.2      44      67 ..     387     410 ..     374     415 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00032
     DUF1128  44 lYemVmkkesfSisEmqaiveeLg 67 
                 l e++++k+++S +E++aiv+e g
  EPX74224.1 387 LEELIQSKDELSGAEIKAIVSEAG 410
                 6799*****************976 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1   0.00037      0.23      15      44 ..     224     251 ..     216     264 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00037
  Zeta_toxin  15 rPklillgGqpGAGKselaellkdelerqg 44 
                  Pk ++l G+pG GK+ la+++++++    
  EPX74224.1 224 PPKGVILYGAPGTGKTLLAKAVANQT--SA 251
                 6999******************9997..44 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0    0.0003      0.19       4      25 ..     228     249 ..     225     313 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.0003
     DUF2075   4 vlVtGvaGtGKtvvllnllael 25 
                 v+  G++GtGKt+++ +++++ 
  EPX74224.1 228 VILYGAPGTGKTLLAKAVANQT 249
                 6789***********9999987 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.1   0.00098       0.6       3      23 ..     228     248 ..     226     255 .. 0.89
   2 ?   -0.7   0.0       1.9   1.2e+03      69     114 ..     273     320 ..     251     347 .. 0.62
   3 ?   -2.5   0.0       6.8   4.2e+03     108     137 ..     386     416 ..     366     434 .. 0.64

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00098
                 EEEEC-TTTCHHHHHHHHHHH CS
       NACHT   3 vilqGeaGsGKTtLlqklala 23 
                 vil G++G GKT L++ +a +
  EPX74224.1 228 VILYGAPGTGKTLLAKAVANQ 248
                 89**************99875 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 1.9
                 S-CCHHHHCCSCCCEEEEEE-STT-SS-TCH............HHHHHC CS
       NACHT  69 vsevwavllelperlLlilDglDelvtdlgq...kekqpvrtlLselir 114
                 v++ ++   e+  ++++ +D +D + t+  +     ++++++ + el++
  EPX74224.1 273 VRQLFNAAEEHSPSIVF-IDEIDAIGTKRYEaqsGAEREIQRTMLELLN 320
                 55555555555555555.4666666665555444223333333334444 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 6.8
                 .HHHHHC.TTTTT--EEEEEEECCCHHHHCT CS
       NACHT 108 lLselir.kkllpeasllltvrpralrdlee 137
                  L+eli+ k  l++a ++++v+  +l  l+e
  EPX74224.1 386 NLEELIQsKDELSGAEIKAIVSEAGLLALRE 416
                 5666776234677777777777777755444 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.4    0.0008       0.5      36      54 ..     228     246 ..     212     259 .. 0.88
   2 ?    1.5   0.0       0.3   1.8e+02     128     157 ..     271     299 ..     252     326 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.0008
      AAA_25  36 allaGapgtGKttlaldla 54 
                 ++l+GapgtGKt la  +a
  EPX74224.1 228 VILYGAPGTGKTLLAKAVA 246
                 69************97665 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.3
      AAA_25 128 advdaleaaieevegvrlvviDplsralgg 157
                 + v++l +a+ee + +  v iD ++++   
  EPX74224.1 271 RLVRQLFNAAEE-HSPSIVFIDEIDAIGTK 299
                 568999******.89*******99987555 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.4   0.00064      0.39      21      51 ..     228     258 ..     216     304 .. 0.89
   2 ?   -3.1   0.1       8.5   5.3e+03      93     119 ..     405     433 ..     387     437 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00064
      AAA_30  21 avltGpAGtGKttalkalreaweaaggrvig 51 
                 ++l G++GtGKt + ka+++   a   rv+g
  EPX74224.1 228 VILYGAPGTGKTLLAKAVANQTSATFLRVVG 258
                 6899**************9998888777776 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 8.5
      AAA_30  93 ivDEagmv..dtkqlaallkaaekagakv 119
                 iv Eag++    + ++ +++  ++a  kv
  EPX74224.1 405 IVSEAGLLalRERRMRVVMEDFRQAREKV 433
                 78888887334455666777777666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (448 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       595  (0.0331865); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        89  (0.00496402); expected 17.9 (0.001)
Passed Fwd filter:                        29  (0.00161749); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              29  [number of targets reported over threshold]
# CPU time: 0.64u 0.31s 00:00:00.95 Elapsed: 00:00:00.48
# Mc/sec: 2783.46
//
Query:       EPX74225.1  [L=459]
Description: acid phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.7e-37  128.0   0.0    7.5e-37  127.6   0.0    1.1  1  His_Phos_2  Histidine phosphatase superfamily (branch 2)


Domain annotation for each model (and alignments):
>> His_Phos_2  Histidine phosphatase superfamily (branch 2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.6   0.0   4.2e-41   7.5e-37       1     374 [.      25     365 ..      25     381 .. 0.89

  Alignments for each domain:
  == domain 1  score: 127.6 bits;  conditional E-value: 4.2e-41
                 EEEEEEEEEE--SBB-SHHHHHHHHHHHHHHHH................HHCHHTGCCGGGGT............--SSSTTS.B-HHHHHHHHHHHHH CS
  His_Phos_2   1 eLksvvvviRHGdRtPkqkvkksvtspiflsllkkhke.......Klkqlktalekkghfpgtyrkv...eveklqlilkwggelthaGrkqaeelGrq 89 
                 eLk ++vv RHG+R+P + +  s   p++++l++++++         ++    +e k + p +   +    +e++  ++ + gelt  Gr ++++lG++
  EPX74225.1  25 ELKYLQVVFRHGERAPVKARLESAGIPKDWKLCNNARRffaqikgAKEWSVLGFERKTENPVDSS-LaapPKEEAESGVCINGELTDIGRITTRNLGEY 122
                 79*******************************98877777776656666666666666665444.269988888888999999*************** PP

                 HHHHCH..TCCHTTSS--.TTEEEEEESSHHHHHHHHHHHHHHCHCCC---S-TTSTTGGG-TTTTCCCEEEHHHHCCCCHHCTTSHHTCHHHCHHHTG CS
  His_Phos_2  90 frqrYp..lgLlrlhlty.kdlkirassegRviaSAaafakGllglegeltdllskdkdllddsnaakdlldeakkklkelltegaeacpafewpikva 185
                 +r+rY   lg+l++  ++ + +++ra+   R ++S +++ +Gl++ e+             +   +  ++ ++   + +e+l++++++cp++ +   ++
  EPX74225.1 123 LRERYInkLGFLPDSIQNaNGIYMRATPMTRALESLEHVFTGLYPDEK-------------RHGVVPTIYTRN---WSHENLLPNENNCPRLVQ--LYE 203
                 ***************999**************************7777.............445556666666...******************..*** PP

                 GHCHHHHCHCCCCCHHHHHHHCHHHCTTEEEE-HHHHHHHHHHHHHHHH...HHCT-TTGGGCTH..HCHHHHHHHHHHHHHHHC........TTTCCC CS
  His_Phos_2 186 krvdelvkylkedmdeniakrleqlcpgesnllakerwdklercfyekn...kfdiskicdlydemkydalhnrylkdleelyklakvipqEygigpee 281
                 +  + + k +++ +++++++ ++q+++g+ ++   + +  l+  + ++n    + +   ++l de   ++l  +     ee+++        y++++ +
  EPX74225.1 204 EFAERAAKIYDPLLAGRASEMMSQFMNGQ-PVRVVSSHPRLSGLLDTINaaiGNRLELHPNLVDE---QWLRESGQAVSEEWFGG-------YKVSKLM 291
                 ****************************9.***********999999995555555555666666...9999999999999****.......******* PP

                 CHHHHHHHHHHHHHHHCTSSSEECCSCCCECS-SEEEEEE-HHHHHHHHHHCTTTTTBTTB.SSS.TTT..HCCCS-CT-EEEEEEEEETCTT CS
  His_Phos_2 282 klkiGllllnpllkkilndlqrtreeatperhvrlrlyfthdshiysllnaLglpeelagedslaaldrlsaspelpymsqivfelyedssek 374
                 ++  ++ lln+l+++++ ++++++   + +   rl ly +hd +++++l+ L+ ++                 +++p+ s++ +el++d+s++
  EPX74225.1 292 RQLGAGSLLNDLFMRMETQVKADK---SGSPSDRLALYGAHDVTLAAILASLDAFD----------------YQWPPFTSHLELELFKDTSDN 365
                 ************************...9****************************................79**************85554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (459 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       299  (0.0166769); expected 358.6 (0.02)
Passed bias filter:                      290  (0.0161749); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 3261.85
//
Query:       EPX74226.1  [L=329]
Description: zinc finger protein Mlo2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      6e-05   22.9   6.7      6e-05   22.9   6.7    3.9  4  PHD            PHD-finger
  ------ inclusion threshold ------
      0.059   13.8   4.4        3.2    8.1   1.4    2.5  2  DUF1178        Protein of unknown function (DUF1178)
       0.13   12.1   0.0       0.23   11.2   0.0    1.3  1  Novirhabdo_Nv  Viral hemorrhagic septicemia virus non-virion 


Domain annotation for each model (and alignments):
>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.8  10.0         3   1.8e+04       2      28 ..      49      73 ..      48      89 .. 0.80
   2 ?   -0.8   0.6      0.25   1.5e+03      15      38 ..      84     108 ..      77     115 .. 0.67
   3 !   22.9   6.7     1e-08     6e-05       1      50 [.     122     177 ..     122     179 .. 0.88
   4 ?   -0.7   0.7      0.23   1.4e+03      13      22 ..     210     219 ..     205     225 .. 0.72

  Alignments for each domain:
  == domain 1  score: -4.8 bits;  conditional E-value: 3
                BTTTTSTTSTTSCEEEETTTSCEEETT CS
         PHD  2 CavCkkksdeeeelvqCdgCkrwfHqk 28
                C  C++  ++++   +C +C+ ++H +
  EPX74226.1 49 CLTCQR--KADSLNGVCYSCSISCHAD 73
                999999..66777778*****999975 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.25
                 EEEET.TTSCEEETTTSSSTHSHHS CS
         PHD  15 lvqCd.gCkrwfHqkClkpplesee 38 
                   qCd g +r+ H  C   + ++++
  EPX74226.1  84 HFQCDcGTSRTGHEPCAIRKTRDDR 108
                 5678745677889999776666555 PP

  == domain 3  score: 22.9 bits;  conditional E-value: 1e-08
                 SBTTTTS...TTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSS...TB.SSTTTH CS
         PHD   1 rCavCkk...ksdeeeelvqCdgCkrwfHqkClkppleseekpeg...ew.lCekCk 50 
                 +C  C+     ++e++ + qC  C++wfH  Cl+ + + ++ p++   ew +C+ C 
  EPX74226.1 122 FC-SCDTfydPEQESGIMFQCILCEDWFHDRCLEASNQGKSLPDSesfEWvVCKDCV 177
                 57.88888866677999***********************9999999*9955****6 PP

  == domain 4  score: -0.7 bits;  conditional E-value: 0.23
                 SCEEEETTTS CS
         PHD  13 eelvqCdgCk 22 
                 e+l qC++C 
  EPX74226.1 210 EHLCQCNSCV 219
                 5677788874 PP

>> DUF1178  Protein of unknown function (DUF1178)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   1.4   0.00054       3.2       9      45 ..     113     151 ..     108     165 .. 0.75
   2 ?    5.8   0.1    0.0028        16      24      78 ..     204     259 ..     200     285 .. 0.65

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00054
     DUF1178   9 ekgheFegwFassedfee..qkarglveCpvCgstevek 45 
                 + +h+Feg F s ++f +  q++  + +C +C++   ++
  EPX74226.1 113 HYNHNFEGRFCSCDTFYDpeQESGIMFQCILCEDWFHDR 151
                 568***********99752255556789****9865555 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0028
     DUF1178  24 feeqkarglveCpvCgstevekalmaprvakskkkaaeaaeaeaaaaaakaaaa...a 78 
                 f+eq +++l +C  C   e++k+ m   ++ +   +++++++ +++++ + + a   +
  EPX74226.1 204 FDEQFREHLCQCNSCV--EIRKTQMPILIEDEPVYEQAEDSDMDEETNFEVEDArslD 259
                 99*************5..7999999999988777766666555554444433332231 PP

>> Novirhabdo_Nv  Viral hemorrhagic septicemia virus non-virion protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   3.9e-05      0.23      39      83 ..     241     287 ..     232     293 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 3.9e-05
  Novirhabdo_Nv  39 rsdisatdflettlprilddlrastrlpylhvldm..risllerthy 83 
                     sd+     +e   +r ldd+ +st    lhvld   r+  +e+ h 
     EPX74226.1 241 DSDMDEETNFEVEDARSLDDVVSSTMQDVLHVLDQlpRVQAIEGVHA 287
                    67888888899***********************6568999999885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (329 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1008  (0.0562218); expected 358.6 (0.02)
Passed bias filter:                      464  (0.0258799); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.30s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 2151.61
//
Query:       EPX74227.1  [L=830]
Description: MCM complex subunit Mcm2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.7e-98  328.2   0.1    2.5e-98  327.6   0.1    1.3  1  MCM              MCM P-loop domain
      8e-38  130.1  23.1      8e-38  130.1  23.1    2.0  2  MCM2_N           Mini-chromosome maintenance protein 2
    3.5e-37  127.1   0.0    6.2e-37  126.3   0.0    1.4  1  MCM_OB           MCM OB domain
      5e-28   97.3   0.6    1.2e-27   96.2   0.6    1.7  1  MCM_lid          MCM AAA-lid domain
    3.8e-12   46.7   1.2    9.2e-12   45.5   0.0    2.2  2  MCM_N            MCM N-terminal domain
    6.4e-09   35.5   0.0    2.1e-07   30.6   0.0    2.4  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
      1e-06   28.8   0.0    2.3e-06   27.6   0.0    1.7  1  AAA_5            AAA domain (dynein-related subfamily)
    0.00014   21.8   0.1    0.00062   19.6   0.0    2.2  2  AAA_3            ATPase family associated with various cellul
     0.0027   17.4   0.1      0.013   15.2   0.1    1.9  1  Sigma54_activat  Sigma-54 interaction domain
  ------ inclusion threshold ------
       0.02   15.3   0.0      0.059   13.8   0.0    1.8  1  AAA              ATPase family associated with various cellul
      0.039   14.0   0.3       0.39   10.8   0.1    2.2  2  SelR             SelR domain
       0.11   11.9   0.0       0.22   10.9   0.0    1.5  1  PIN_5            PINc domain ribonuclease
       0.13   12.6   0.0       0.55   10.6   0.0    2.1  1  E2F_CC-MB        E2F transcription factor CC-MB domain
       0.17   11.6   0.1       0.37   10.5   0.1    1.5  1  AAA_30           AAA domain


Domain annotation for each model (and alignments):
>> MCM  MCM P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  327.6   0.1    2e-101   2.5e-98       2     224 .]     472     694 ..     471     694 .. 0.99

  Alignments for each domain:
  == domain 1  score: 327.6 bits;  conditional E-value: 2e-101
                 HHHHHHHHTSSTHHHHHHHHSSTTSSS-HHHHHHHHHHHH---EBBBSSSSBBCSS-EEEEEESSTSTHHHHHHHHHHHSSSEEEEESSSSSSSHSSSE CS
         MCM   2 veeikelakekdiieklvksiapsiyghedvkkaillqlfggvkkkledktklrgdinvllvgdpgtaKsqlLkyveklapravytsgkgssaagLtaa 100
                 ++ei+ lak +di+e++++s+ psiygh+++k ai+ +lfggv k+ + k+k+rgdinvll+gdpgtaKsq+Lkyvek+a+rav+++g+g+sa+gLta+
  EPX74227.1 472 EREIRALAKIPDIHERIIASVSPSIYGHRSIKVAIAAALFGGVPKNISGKHKIRGDINVLLLGDPGTAKSQFLKYVEKTAHRAVFATGQGASAVGLTAS 570
                 689************************************************************************************************ PP

                 EEEESSSSSEEEEETHHHHTTTSEEEEESGGGSTCHHHHHHHHHHHHSEEEEESSSCEEEEE--EEEEEEE--SSSSCCTTS-HHHHSSSSHHHHHHSS CS
         MCM 101 vvrdeetgefvleaGalvladkGvcciDefdkmkeedrsalhEamEqqtisiaKaGivatLnartsvlaAanpkagrydkkksvaeninlsaalLsrFD 199
                 v++d+ t+e++le+GalvladkGvc+iDefdkm+++dr+++hEamEqq+isi+KaGiv+tL+ar++++aAanp++gry+++ ++++n++l++++LsrFD
  EPX74227.1 571 VRKDPITNEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCTIIAAANPIGGRYNTTIPLSQNVELTEPILSRFD 669
                 *************************************************************************************************** PP

                 EEEEE-SSTTHHHHHHHHHHHHHHH CS
         MCM 200 lifvllDkvdeekDeelaehivslh 224
                 ++ v++D+v+ e De+la+++vs+h
  EPX74227.1 670 ILQVVKDTVNPEIDEQLASFVVSSH 694
                 **********************987 PP

>> MCM2_N  Mini-chromosome maintenance protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.1  23.1   6.2e-41     8e-38       3     153 .]      45     187 ..      42     187 .. 0.89
   2 ?   -2.2   0.1       3.6   4.6e+03      57      76 ..     599     618 ..     597     626 .. 0.78

  Alignments for each domain:
  == domain 1  score: 130.1 bits;  conditional E-value: 6.2e-41
      MCM2_N   3 eeaeveeediadldev.aaeeeedgeDLfndnledDyreneeqDrYdlddidDendldeldaaeRraieaeLdrRDrelkaraarrsklaafLqdddde 100
                 +ea ve+ +i+d +    + eeedgeDLf+d++e+Dy++n e+DrYdld++dDendl+eld+++Rr i+a+L+rRD+el+ ++a r+k+aafLqd+dd+
  EPX74227.1  45 AEALVED-EIEDVNSDnMDLEEEDGEDLFGDDMERDYQQNLELDRYDLDELDDENDLEELDLGDRRIIDAKLRRRDMELE-ATAGRTKPAAFLQDEDDD 141
                 5666766.888888776678***********************************************************8.56**************86 PP

      MCM2_N 101 delddelglpiqkrRrRreyded..ededldeadideleeelsleslaDvkadsi 153
                   ld++lgl+i ++R+R +  e   ++ +lde      ++el+les+aDvkadsi
  EPX74227.1 142 --LDSNLGLGIPRHRHRVYD-EFapNAGALDE------TGELPLESIADVKADSI 187
                 ..68*************983.32347888887......9**************98 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 3.6
      MCM2_N  57 dldeldaaeRraieaeLdrR 76 
                 ++d+++ ++R  i ++++++
  EPX74227.1 599 EFDKMNDQDRTSIHEAMEQQ 618
                 68899999999999888875 PP

>> MCM_OB  MCM OB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.3   0.0   4.8e-40   6.2e-37       2     124 ..     299     425 ..     298     427 .. 0.91

  Alignments for each domain:
  == domain 1  score: 126.3 bits;  conditional E-value: 4.8e-40
                 XGG--GGGTTSEEEEEEEEEEE---EEEEEEEEEEETTT-.-EEES----S...........B-..TTT-HHH-EEE-GGGSEEEEEEEEEEE------ CS
      MCM_OB   2 lRdlrsehigklvkveGivtrasevkpklkkavfeckkcgktveveleePr...........kCeekeCeskdpfkletekskfvdfqklklQEspeev 89 
                 lR+lr++h++ lv+v+G+vtr++ ++p+lk++ f+c+kcg+t++      +            C  ++C+s++pf++++e++++ ++q+l+lQEsp++v
  EPX74227.1 299 LRELRQTHLNCLVRVSGVVTRRTGLFPQLKHIRFTCTKCGATLGP-----FfqdssvevkisFC--HNCSSRGPFVINSERTVYNNYQRLTLQESPGTV 390
                 7****************************************9993.....2222234444458*..89******************************* PP

                 -------EEEEEEEGGGTT---TT-EEEEEEEEEE CS
      MCM_OB  90 paGelPrslevileddlvdkvkPGdrvevtGiyra 124
                 p G+lPr+ evil  dlvd++kPG+++evtGiyr+
  EPX74227.1 391 PSGRLPRHREVILLADLVDNAKPGEEIEVTGIYRN 425
                 *********************************97 PP

>> MCM_lid  MCM AAA-lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.2   0.6   9.2e-31   1.2e-27       1      86 [.     725     808 ..     725     809 .. 0.95

  Alignments for each domain:
  == domain 1  score: 96.2 bits;  conditional E-value: 9.2e-31
                 HHHHHHHHHHHHTT--BETCHHHHHHHHHHHHHHHHHTSSTSSSST--HHHHHHHHHHHHHHHHHHTSSSE-HHHHHHHHHHHHHH CS
     MCM_lid   1 ellrkYiayarekikPklseeakeklseaYvelRkeeedskrksipitvRqLesliRLseAlAklrlsevvteedveeairllkes 86 
                 +llrkYi+yare+++P+l ++++ek+s+ Y ++R+++   ++ s+pitvR+Les iRLseA+Ak++lse+v++ ++++ai+++ +s
  EPX74227.1 725 DLLRKYIHYARERVTPRLLQMDEEKISRLYSDMRRQSL--ATGSYPITVRHLESAIRLSEAFAKMELSEFVRPAHIDKAIHVIVDS 808
                 58*********************************885..489**************************************99877 PP

>> MCM_N  MCM N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.8       5.9   7.6e+03      30      51 ..      75      96 ..      73     103 .. 0.82
   2 !   45.5   0.0   7.2e-15   9.2e-12       2     104 .]     202     292 ..     201     296 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 5.9
       MCM_N 30 emaerekttLevdlddLaafde 51
                +m +  +++Le+d  dL + d+
  EPX74227.1 75 DMERDYQQNLELDRYDLDELDD 96
                68888999*********99976 PP

  == domain 2  score: 45.5 bits;  conditional E-value: 7.2e-15
       MCM_N   2 ekFedFLeefkddsededgekkYrdqlqemaerekttLevdlddLaafdeeLaeailenpkeylplleealkevvkklepsykddakefpaeltrrfqv 100
                 ++F++FL e+    +de+g+++Y ++++++ e + ++L v++ +L + ++ La  + + p  +l ++++++ e    ++p+y++         + +++v
  EPX74227.1 202 REFKNFLLEY----TDEKGTSVYGNRIRTLGEVNAESLLVNYAHLGESKPILAYFLANAPAPVLRIFDRVALEATLLHYPDYERI--------HSDIHV 288
                 79********....7899***************************************************************9998........888888 PP

       MCM_N 101 rfkn 104
                 r++n
  EPX74227.1 289 RITN 292
                 8876 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0     0.086   1.1e+02      21      40 ..     526     545 ..     518     551 .. 0.84
   2 !   30.6   0.0   1.6e-10   2.1e-07      97     160 ..     582     645 ..     552     681 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.086
  Mg_chelatase  21 GgHnlllvGppGsGKtmlak 40 
                   G  n+ll+G pG+ K+   k
    EPX74227.1 526 GDINVLLLGDPGTAKSQFLK 545
                   7889***********97665 PP

  == domain 2  score: 30.6 bits;  conditional E-value: 1.6e-10
  Mg_chelatase  97 pkpGeislahnGvLfLDElpefkrkvlevLRePledgevtisrakakvefparfqlvaamNpcp 160
                    + G++ la +Gv ++DE+ +++ +   ++ e +e+++++is+a   ++  ar++++aa+Np  
    EPX74227.1 582 LEGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCTIIAAANPIG 645
                   56799********************************************************964 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   0.0   1.8e-09   2.3e-06       1     124 [.     529     645 ..     529     668 .. 0.85

  Alignments for each domain:
  == domain 1  score: 27.6 bits;  conditional E-value: 1.8e-09
                 EEEEE--SSSSHHHHHHHGGGGB.......S--EEEEE--TT--HHHHH--B--.........--------G-SEEEEESGGG--HHHHHHHHHHHHSS CS
       AAA_5   1 dvlLvGppGtgKselaerlaaal.......nreveyvqltrdtteedlkgrreikngttslvdsplvraaregeilvlDEveraesevlnsLlslleer 92 
                 +vlL+G+pGt+Ks++ +++ +         ++    v lt++ +++ ++ ++ +       + ++lv     + ++++DE+++++++   s +  +e++
  EPX74227.1 529 NVLLLGDPGTAKSQFLKYVEKTAhravfatGQGASAVGLTASVRKDPITNEWTL-------EGGALV--LADKGVCLIDEFDKMNDQDRTSIHEAMEQQ 618
                 69************9998887766667888999999999*************96.......889999..88999************************* PP

                 EEE..-SSSEEE---......-EEEEEESS-- CS
       AAA_5  93 rllleeggelvkaknddllerfrviatanpld 124
                  +++ + g ++  ++       ++ia+anp  
  EPX74227.1 619 SISISKAGIVTTLQAR-----CTIIAAANPIG 645
                 ***9999988888775.....9*******988 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       3.4   4.3e+03      51      72 ..     428     450 ..     415     455 .. 0.71
   2 !   19.6   0.0   4.9e-07   0.00062       2     116 ..     530     647 ..     529     659 .. 0.71

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 3.4
       AAA_3  51 ekefefkkG.pvfanllladein 72 
                 + ++++k+G pvfa ++ a+ i 
  EPX74227.1 428 DASLNTKNGfPVFATIIEANHIA 450
                 36677788779***999998885 PP

  == domain 2  score: 19.6 bits;  conditional E-value: 4.9e-07
       AAA_3   2 vllegvPGlaktllvkalakaldlefkriqftpdllPsdi..lGtevfeekekefefkkGpvf...anllladeinrappktqsalleameerqvtveg 95 
                 vll g PG+ak ++ k + k    + +r  f++    s +  + +   +  ++e++++ G+++   + + l de ++ + + ++++ eame++ +++++
  EPX74227.1 530 VLLLGDPGTAKSQFLKYVEK----TAHRAVFATGQGASAVglTASVRKDPITNEWTLEGGALVladKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISK 624
                 78889999999888776554....455555655544444310222223344599999999976333359************************999876 PP

       AAA_3  96 e..thklpepflvlatqnPieqe 116
                 +   ++l+   +++a+ nPi  +
  EPX74227.1 625 AgiVTTLQARCTIIAAANPIGGR 647
                 522689*************9754 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.1   1.1e-05     0.013      19     142 ..     524     642 ..     516     644 .. 0.87

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.1e-05
                      CTSSS-EEEECSTTSSHHHHHHHHHHHSTTTTS-EEEEETTTS-TTCHHHHHHEBSSSSSTTTSS-BEHHHHHTTTSEEEEETGGGS-HHHHHH CS
  Sigma54_activat  19 aktdlsvlitGesGtGKellaraiheaskrkekpfvavncaaipeelleseLFGhekGaFtGAekekkGlfekadgGtlfLDeigelplelQek 112
                      ++ d++vl++G+ Gt K+ + + + ++ +   + + a   +a +  l +s    ++k   t   + + G++  ad+G+ ++De  +++ +  + 
       EPX74227.1 524 IRGDINVLLLGDPGTAKSQFLKYVEKTAH---RAVFATGQGASAVGLTAS----VRKDPITNEWTLEGGALVLADKGVCLIDEFDKMNDQDRTS 610
                      667899***********999988876655...456678888999999998....899************************************* PP

                      HHHHHHHSE..EESBTSSSEEE--EEEEEEES CS
  Sigma54_activat 113 Llrvlqege..vervGsskeikvdvriiaatn 142
                      + +++++++  +++ G  ++ ++ + iiaa+n
       EPX74227.1 611 IHEAMEQQSisISKAGIVTTLQARCTIIAAAN 642
                      *****9997225799***************87 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   4.6e-05     0.059       1     110 [.     530     642 ..     530     653 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 4.6e-05
                 EEEESSTTSSHHHHHHHHHHHHTHEE.EEEETTTCSSSSTTHHHHHHHHHHHHHHHTS....TSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHH CS
         AAA   1 vllyGppGtGKTllakavakelgvef.leisgsellskyvgesekkirelfkeakeka....kpsilfiDEidalaksrsgseseeeervvnqLlteld 94 
                 vll G pGt K+ + k v k++++ +  + +g++ +  + + +++ i + ++  +  a    ++ + +iDE+d+++ ++ +++  e+++ ++  +++  
  EPX74227.1 530 VLLLGDPGTAKSQFLKYVEKTAHRAVfATGQGASAVGLTASVRKDPITNEWTL-EGGAlvlaDKGVCLIDEFDKMNDQD-RTSIHEAMEQQSISISKAG 626
                 79********************8666155566666655555555555555543.3444788777***********8888.4455555555555555555 PP

                 HTTTSSSTEEEEEEES CS
         AAA  95 gvkkkeskvivigatn 110
                  v++ ++++++i+a+n
  EPX74227.1 627 IVTTLQARCTIIAAAN 642
                 5666688999999998 PP

>> SelR  SelR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.1    0.0003      0.39      80     116 ..     327     362 ..     313     363 .. 0.85
   2 ?    0.3   0.0      0.53   6.8e+02      52      75 ..     431     454 ..     422     462 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.0003
                 SEEEEEEETTCECEEEEEECTSSSSS.SEEEEE-CCC CS
        SelR  80 mertevvcakcdahlGhvFedgpkpttgkrycinsvs 116
                 ++++  +c+kc+a lG  F+d   +  +  +c n  s
  EPX74227.1 327 LKHIRFTCTKCGATLGPFFQDSSVEV-KISFCHNCSS 362
                 5677899***************9985.999**99765 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.53
                 E-STTSSSEESS-STTTTEEEEEE CS
        SelR  52 fdsgcGwpsFaeaikeeavkekkd 75 
                  +++ G+p Fa+ i++++++++++
  EPX74227.1 431 LNTKNGFPVFATIIEANHIAHVDN 454
                 56789***********99987654 PP

>> PIN_5  PINc domain ribonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00017      0.22      47     121 ..     678     756 ..     656     812 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00017
       PIN_5  47 ippsvykElkeflkreeveeeviakldtwlvkkspdryevk...ipaeilyeyveevrerin.kGlrvaEeavreaaee 121
                 + p + + l +f+ +++++++     d  +++k+p++  ++   ip ++l++y+++ rer++ + l++ Ee++ +  ++
  EPX74227.1 678 VNPEIDEQLASFVVSSHIRSHPSFDPDFDILTKAPTETGIEakaIPQDLLRKYIHYARERVTpRLLQMDEEKISRLYSD 756
                 568888999999999999999999999*********998854459***************9757788999988776555 PP

>> E2F_CC-MB  E2F transcription factor CC-MB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00043      0.55      30      72 ..     679     722 ..     659     755 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00043
   E2F_CC-MB  30 tedeknq.laYvtyedirsiasfkeqtviaikAppgtqlevpdp 72 
                 + + ++q  ++v ++ irs +sf+ +  i  kAp +t +e++  
  EPX74227.1 679 NPEIDEQlASFVVSSHIRSHPSFDPDFDILTKAPTETGIEAKAI 722
                 4445555688******************************9843 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.1   0.00029      0.37      21     119 ..     530     622 ..     523     627 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00029
      AAA_30  21 avltGpAGtGKttalkalreaweaaggrviglAptgkaAkvLaeelgieastiakllkrlkgrarlepgtllivDEagmvdtkqlaallkaaekagakv 119
                 ++l G +Gt K+  lk +++++++a    + ++ +g+ A  L++++    + i + ++  +g+  l+++ + ++DE   ++ ++ +++ +a+e++++++
  EPX74227.1 530 VLLLGDPGTAKSQFLKYVEKTAHRA----VFATGQGASAVGLTASVR--KDPITNEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISI 622
                 6889*************99988865....566667777777887755..55555555446677889999***************999999999987766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (830 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       689  (0.0384294); expected 358.6 (0.02)
Passed bias filter:                      602  (0.0335769); expected 358.6 (0.02)
Passed Vit filter:                        70  (0.00390429); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.69u 0.29s 00:00:00.98 Elapsed: 00:00:00.43
# Mc/sec: 5779.51
//
Query:       EPX74228.1  [L=894]
Description: COPII-coated vesicle component Sfb3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.4e-64  218.0   0.0      2e-64  217.5   0.0    1.2  1  Sec23_trunk     Sec23/Sec24 trunk domain
    1.9e-17   63.8   0.0    4.4e-17   62.6   0.0    1.7  1  Sec23_BS        Sec23/Sec24 beta-sandwich domain
    1.3e-16   60.3   0.2    2.5e-16   59.4   0.2    1.5  1  Sec23_helical   Sec23/Sec24 helical domain
    2.9e-13   49.6   1.7      7e-13   48.4   1.7    1.7  1  zf-Sec23_Sec24  Sec23/Sec24 zinc finger
    1.5e-08   34.4   0.0    4.1e-08   33.0   0.0    1.7  1  Gelsolin        Gelsolin repeat
  ------ inclusion threshold ------
       0.15   11.9   0.3       0.31   11.0   0.3    1.4  1  C1_1            Phorbol esters/diacylglycerol binding domain 


Domain annotation for each model (and alignments):
>> Sec23_trunk  Sec23/Sec24 trunk domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  217.5   0.0   6.6e-68     2e-64       1     243 []     292     529 ..     292     529 .. 0.98

  Alignments for each domain:
  == domain 1  score: 217.5 bits;  conditional E-value: 6.6e-68
                  SS--EEEEEEE-SHHHHHHTHHHHHHHHHHHHC.TTSSTSTT-EEEEEEESSSEEEEETSTTSSSSEEEEECHTTSCCSSTSSSSSEETTTTHHHHHH CS
  Sec23_trunk   1 pkppvflFviDvsleaikegelkalkeslkqsL.dllPeepralvglitfdsvvhffelkselrqpkelvvsdlqdvflpladrlLvplseseavled 97 
                  p+p+ ++FviDvs+ea+++g  k+++e+++++L    P +p+++v++i+fd+ vhff l ++l+qp++++v dl+++f+p++++l v++ es+av+e+
   EPX74228.1 292 PQPAQYVFVIDVSYEATSKGIPKIAAEAIRDILyGPTPLHPSIRVSIIAFDRNVHFFYLTPNLEQPRMISVADLENPFVPFKNGLSVDPMESRAVIER 389
                  79*******************************888999*********************************************************** PP

                  HHHHHHHHSTT-TTC-----HHHHHHHHHHHHCHCTS-EEEEEEESS---SSTTTSS-SBTTSCCTSSTTCHHCHSCSSSCHHHHHHHHHHHCTEEEE CS
  Sec23_trunk  98 lLeelpemfavtagkrperalgpalkaavellkavetggkiivfvgslptvgaggklksredeslldidkekaklvkkadkfYkkLakecvkqgisvD 195
                  lL++lp++ ++   k pe  +g+a++  ++llk  etggk ++fv++lpt+g+ g l+ red++l++ + e+++l++++dk+Y+ La+e+v++gis+D
   EPX74228.1 390 LLDTLPSIVEDI--KVPEPTVGNAMECIKHLLK--ETGGKSFLFVSALPTMGL-GRLRYREDQRLYG-NPEEKNLWNTQDKWYSLLADELVTSGISID 481
                  ************..*******************..******************.*************.55559************************* PP

                  EEEECSS--SHHHHTHHHHTTT-EEEEETTTCCHHHHHHHHHHHHHHH CS
  Sec23_trunk 196 lFlfsldyvdlaelkqlaeltgGqvvlydsFsaekdasklkqdlkrvv 243
                  +F+++++yvd+a+++++a+ltgGqv +y +F  e+d+ +lkqdl r+v
   EPX74228.1 482 IFFTPTAYVDVATVGSVATLTGGQVWYYGNFVPERDGPRLKQDLYRSV 529
                  ********************************************9975 PP

>> Sec23_BS  Sec23/Sec24 beta-sandwich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.6   0.0   1.5e-20   4.4e-17       1      96 []     534     618 ..     534     618 .. 0.96

  Alignments for each domain:
  == domain 1  score: 62.6 bits;  conditional E-value: 1.5e-20
                 EEEEEEEEEE-TTEEEEEEESSSEECSTBESSEESECSESEEEEEEEETT--EEEEEEESSBTCTTSEEEEEEEEEEEETTSEEEEEEEEEEEEEE CS
    Sec23_BS   1 gfnatlevrtSkelkvsgliGncvslsnvsekeiGeggtsewklcsldpdstlavyfdideklksgkqayiQfatlYthssgerrlRVttvalpva 96 
                 gf ++l+ r+S++l+vs+++Gn+ +++          +   ++l+ ld d+++++ f+ + kl+++ +a++Q+a+lYt++ g+rr+RV++++++v+
  EPX74228.1 534 GFRVMLKTRCSNGLRVSRYLGNFLQRT---------PQD--IELGGLDADKSIGMLFNLEGKLNNALDAHFQTAILYTTPMGSRRVRVINYCCAVT 618
                 6899**********************9.........666..8***************************************************986 PP

>> Sec23_helical  Sec23/Sec24 helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.4   0.2   8.3e-20   2.5e-16       5     102 ..     633     729 ..     630     730 .. 0.94

  Alignments for each domain:
  == domain 1  score: 59.4 bits;  conditional E-value: 8.3e-20
                    HHHHHHHHHHHHTTTS-HHHHHHHHHHHHHHHHHHHHHH-------------GGGTTHHHHHHHHHTSTTTS--TT--HHHHHHHHHHHHH--HHH CS
  Sec23_helical   5 vtvllakqaidkalesgladarealdtslvdllsayrkvgasgsspsqlqlpeslklLPlyilallKspafrggnsvpaDervfalslllslpvdq 100
                    ++ +++k a  ++ +++l+++  +l++ +v+lls+yrkv +s   p+ql+lp++l lLP y+l++lKs afr+g s+++D rv   + +++ p++q
     EPX74228.1 633 LVGIFSKIASMNMATESLKAIATKLVEGIVKLLSCYRKVASSRLTPGQLVLPKHLILLPIYMLSVLKSSAFRNG-SIHSDVRVSQFRFIRASPLSQ 727
                    67789999999**99*********************************************************98.8888**************999 PP

                    HH CS
  Sec23_helical 101 ll 102
                    l+
     EPX74228.1 728 LM 729
                    97 PP

>> zf-Sec23_Sec24  Sec23/Sec24 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.4   1.7   2.3e-16     7e-13       1      36 [.     215     250 ..     215     252 .. 0.95

  Alignments for each domain:
  == domain 1  score: 48.4 bits;  conditional E-value: 2.3e-16
  zf-Sec23_Sec24   1 PirCrrCraylNpfckidfggkrwiCnfCnhknevp 36 
                     P+rC++Cr y+Npf++++ + + w+Cn+C+++n + 
      EPX74228.1 215 PPRCKKCRGYINPFVQFTLSRSGWTCNLCGSENSLS 250
                     99******************999**********986 PP

>> Gelsolin  Gelsolin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.0   0.0   1.4e-11   4.1e-08       5      65 ..     762     824 ..     759     829 .. 0.95

  Alignments for each domain:
  == domain 1  score: 33.0 bits;  conditional E-value: 1.4e-11
                 EEEBSSSGGGEETTSEEEEEESSEEEEEEHTT..SHHHHHHHHHHHHHHHHHCTTTTTSEEEE CS
    Gelsolin   5 pkvvklsssslesgdcyLLdngftiflWiGke..ssqeeknfaadlaaeldseerfplpelir 65 
                 p +v++s + +e+g+++L+ +g+++flW+ ++  + ++++++++ + +++ds++  +lpe ++
  EPX74228.1 762 PLCVRASRKFIEDGGAFLIVTGQKVFLWLHQRtsPLLLQDLLGVNQLEQIDSMKACELPEMDN 824
                 6689****************************99999**************9999****9887 PP

>> C1_1  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.3    0.0001      0.31       7      35 ..     211     244 ..     207     246 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.0001
                 --SS--B-TTT-SB-.....-SSSS-EEEETTT- CS
        C1_1   7 nfkqptfCkhCgefl.....wgkekqglkCswCk 35 
                 ++++p +Ck+C+  +     +++++ g++C+ C+
  EPX74228.1 211 TTSSPPRCKKCRGYInpfvqFTLSRSGWTCNLCG 244
                 668999************9555***********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (894 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       318  (0.0177366); expected 358.6 (0.02)
Passed bias filter:                      300  (0.0167327); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.67u 0.27s 00:00:00.94 Elapsed: 00:00:00.47
# Mc/sec: 5765.82
//
Query:       EPX74229.1  [L=437]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      2e-58  197.6   0.5    2.7e-58  197.1   0.5    1.2  1  HAD_SAK_1  HAD domain family 1 in Swiss Army Knife RNA repair


Domain annotation for each model (and alignments):
>> HAD_SAK_1  HAD domain family 1 in Swiss Army Knife RNA repair proteins
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  197.1   0.5   1.5e-62   2.7e-58       1     203 []      40     234 ..      40     234 .. 0.97

  Alignments for each domain:
  == domain 1  score: 197.1 bits;  conditional E-value: 1.5e-62
   HAD_SAK_1   1 SPlpnpqlwtkeligllqseevlknggWwsdpriLeesvkeslkaatgegv....erawegwWnekivelarlsikdkdtltvlLTGRkekkFselier 95 
                 +Plpn ++w+++ i++l++ + l+nggW+ dpr+L         a+tgegv    +raw+gwWnekiv++ar+si+++d l+vlLTGR+e +F+e+ e+
  EPX74229.1  40 TPLPNANIWSNQAIRVLMAFNILANGGWFFDPRVL---------ASTGEGVeveeKRAWDGWWNEKIVSQARESIRRQDVLAVLLTGRNE-QFREITEK 128
                 7**********************************.........778888888889*********************************6.9******* PP

   HAD_SAK_1  96 ileskklkfdavvLkkkvepsseefesTmeFKqafledlletyksleeitiYedrpkhvkkfkefleklnkkkkpikaeviqvaelskyldpekEvklv 194
                 i++sk+l+fd vv+k ++++    + +T++FK +f+e++  +y++++ i++Yedrp+hv++f+++l++  ++ + +++e+i+v+e  kyl+ ++E+klv
  EPX74229.1 129 IVKSKGLDFDGVVFKLQTTT--GYWPQTLTFKLWFFEQVFLQYPNVHTIRVYEDRPSHVESFSNWLARKADEDERFSFEIIAVTEPPKYLKFTTEIKLV 225
                 ****************8755..78**********************************************99999************************ PP

   HAD_SAK_1 195 qelinehnk 203
                 +++i +hn+
  EPX74229.1 226 KSMIASHNA 234
                 *******95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (437 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       366  (0.0204139); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 2881.14
//
Query:       EPX74230.1  [L=232]
Description: tetraspan protein Dni2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       773  (0.0431145); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.28s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 1536.15
//
Query:       EPX74231.1  [L=985]
Description: WDR6 family WD repeat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.9e-21   74.2  23.0    3.5e-06   27.7   0.1   10.0 10  WD40         WD domain, G-beta repeat
    5.8e-07   29.7   0.6       0.16   12.3   0.0    6.0  6  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    8.6e-07   28.6   3.0    0.00052   19.4   0.1    4.8  5  WD40_like    WD40-like domain
  ------ inclusion threshold ------
       0.14   12.5   0.7          8    6.9   0.0    4.2  4  Kelch_6      Kelch motif


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0       0.9     4e+03      12      29 ..      20      36 ..      13      44 .. 0.74
   2 !   27.7   0.1   7.7e-10   3.5e-06       5      38 .]     189     223 ..     185     223 .. 0.91
   3 ?    3.3   0.1      0.04   1.8e+02       8      37 ..     235     264 ..     228     265 .. 0.71
   4 !   22.4   0.4   3.6e-08   0.00016       3      38 .]     273     310 ..     271     310 .. 0.92
   5 ?   -1.5   0.0       1.2   5.5e+03      14      37 ..     470     491 ..     464     492 .. 0.75
   6 !    9.4   0.0   0.00046       2.1       2      35 ..     639     675 ..     638     676 .. 0.83
   7 ?    4.0   0.0     0.023     1e+02       4      29 ..     688     714 ..     685     716 .. 0.86
   8 ?    4.2   0.0     0.021        93      25      38 .]     824     836 ..     808     836 .. 0.82
   9 !    5.9   1.7    0.0059        27       3      34 ..     848     884 ..     846     886 .. 0.81
  10 ?    2.9   0.0     0.053   2.4e+02       5      36 ..     909     940 ..     905     941 .. 0.73

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.9
                SEEEEEEETTSSEEEEEE CS
        WD40 12 svtslafspdgawlasGs 29
                +vtsl    d ++l++  
  EPX74231.1 20 PVTSLTLFNDDKYLCA-A 36
                59***99999999864.3 PP

  == domain 2  score: 27.7 bits;  conditional E-value: 7.7e-10
                 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++l+GH +   +++fs+dg++l++ s+D+tvr+Wd
  EPX74231.1 189 GSLRGHeGACFDIRFSDDGQYLSTVSEDRTVRLWD 223
                 689***77799***********999*********9 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.04
                 ESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   8 tGH.ssvtslafspdgawlasGsdDgtvriW 37 
                  GH   v+ ++f +++++++  s+D t+r W
  EPX74231.1 235 FGHtARVWKCRFLSNSSLVTI-SEDLTLRKW 264
                 488555999999999999876.448888877 PP

  == domain 4  score: 22.4 bits;  conditional E-value: 3.6e-08
                 EEEEEESS..SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH..ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++ t+tGH  ++++s+a+s  +++l++G+ Dg +r W+
  EPX74231.1 273 NTETFTGHrgKHIWSIATSIKHDLLFTGGNDGAIRQWK 310
                 5679****9888*************************6 PP

  == domain 5  score: -1.5 bits;  conditional E-value: 1.2
                 EEEEEETTSSEEEEEETTSEEEEE CS
        WD40  14 tslafspdgawlasGsdDgtvriW 37 
                 t+l +s++  ++  Gs+ g++ i+
  EPX74231.1 470 TCLTVSDNMVFI--GSRSGSLSIY 491
                 778666666664..9999999987 PP

  == domain 6  score: 9.4 bits;  conditional E-value: 0.00046
                 EEEEEEE..SS.SSEEEEEEETTSSEEEEEETTSEEE CS
        WD40   2 qclrtlt..GH.ssvtslafspdgawlasGsdDgtvr 35 
                 +c ++l+  GH   +++++ +p g++ +sG +D ++ 
  EPX74231.1 639 ECNKVLRkgGHgREIRAMCSNPKGNLTVSGAEDTNIL 675
                 677888777**444************999*99*9986 PP

  == domain 7  score: 4.0 bits;  conditional E-value: 0.023
                 EEEEESS.SSEEEEEEETTSSEEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawlasGs 29 
                 l + ++H s++  l++  +  +++sG+
  EPX74231.1 688 LNSVKAHnSGIQTLCWANNELLFSSGG 714
                 66789**777********999999987 PP

  == domain 8  score: 4.2 bits;  conditional E-value: 0.021
                 EEEEETTSEEEEEE CS
        WD40  25 lasGsdDgtvriWd 38 
                 +++++ Dgt+ +Wd
  EPX74231.1 824 VVTAT-DGTITLWD 836
                 45789.*******9 PP

  == domain 9  score: 5.9 bits;  conditional E-value: 0.0059
                 EEEEEESS.SSEEEEE...EETTSSE.EEEEETTSEE CS
        WD40   3 clrtltGH.ssvtsla...fspdgaw.lasGsdDgtv 34 
                 cl++ + H s+v sl+   +++ g++ l++G+dDg v
  EPX74231.1 848 CLWSASVHqSCVKSLDvhlNDHTGDLsLLTGGDDGAV 884
                 778888897779999988877788888789****987 PP

  == domain 10  score: 2.9 bits;  conditional E-value: 0.053
                 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS
        WD40   5 rtltGH.ssvtslafspdgawlasGsdDgtvri 36 
                  + ++H ssvt++   ++  +l++ s D+ +  
  EPX74231.1 909 SHPEAHaSSVTGVIQLREDLFLST-SVDQRILT 940
                 67789*999****77777777754.55888765 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.016        73      41      70 ..     198     227 ..     179     248 .. 0.84
   2 ?   -1.8   0.0      0.89     4e+03      36      69 ..     280     313 ..     263     325 .. 0.77
   3 ?    2.3   0.0     0.045     2e+02      37      89 ..     328     378 ..     295     381 .. 0.82
   4 ?    4.3   0.0     0.011        51      27      85 ..     357     415 ..     341     420 .. 0.84
   5 !   12.3   0.0   3.6e-05      0.16      33      91 ..     645     705 ..     622     706 .. 0.80
   6 ?   -0.1   0.0      0.26   1.2e+03      49      72 ..     742     765 ..     714     769 .. 0.76

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.016
  ANAPC4_WD40  41 vrsLaWkpdgklLavaysdgevrlldaesg 70 
                    +++++ dg+ L  + +d +vrl d++++
   EPX74231.1 198 CFDIRFSDDGQYLSTVSEDRTVRLWDIKKE 227
                  55789*********************9876 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.89
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaes 69 
                  ++++++ s+a + +  lL  + +dg++r  + ++
   EPX74231.1 280 HRGKHIWSIATSIKHDLLFTGGNDGAIRQWKNNN 313
                  6788888888899999999999999998766555 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.045
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                   d + +s+++   +klL+va ++ge++lld +  k +  +s +se   +  +W
   EPX74231.1 328 GDVSLSSFCFLSVNKLLCVA-KNGEISLLDNKIWKSLPPFSLDSEA-TALCSW 378
                  5667788999999999*998.79*******9988888888877774.444455 PP

  == domain 4  score: 4.3 bits;  conditional E-value: 0.011
  ANAPC4_WD40  27 qrvwtl.eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavt 85 
                  +++w+  +  + dse ++L+  ++ ++ a +++ g+v +++  +     s++v+++k ++
   EPX74231.1 357 NKIWKSlPPFSLDSEATALCSWENKNIAALGTKIGSVVIFHCANPSNCCSVEVHTSK-IQ 415
                  68888867788999*****9999999***************9999999888888774.65 PP

  == domain 5  score: 12.3 bits;  conditional E-value: 3.6e-05
  ANAPC4_WD40  33 eedkedsevrsLaWkpdgklLavaysdgevrlldaesgk...vvhslsvksekavtclgWge 91 
                   + ++++e+r+++ +p+g+l + + +d+++ l + e+++   v++s++++++  +++l W++
   EPX74231.1 645 RKGGHGREIRAMCSNPKGNLTVSGAEDTNILLSKFEKEDqidVLNSVKAHNS-GIQTLCWAN 705
                  45789*****************************999862225666777766.699999986 PP

  == domain 6  score: -0.1 bits;  conditional E-value: 0.26
  ANAPC4_WD40  49 dgklLavaysdgevrlldaesgkv 72 
                    k La    dg +r+ d++++k+
   EPX74231.1 742 CPKALAKRKMDGDLRITDVSTKKI 765
                  5688999999*********99987 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0     0.021        94       4      68 ..     199     264 ..     197     277 .. 0.77
   2 !   19.4   0.1   1.2e-07   0.00052       2     145 ..     284     436 ..     283     460 .. 0.72
   3 ?    1.7   0.0      0.03   1.3e+02     196     254 ..     466     528 ..     451     536 .. 0.66
   4 ?   -0.5   0.0      0.13     6e+02       5      41 ..     655     691 ..     651     711 .. 0.80
   5 ?   -0.3   0.0      0.12   5.4e+02      26      74 ..     899     946 ..     892     962 .. 0.75

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.021
   WD40_like   4 YsidiskkgslilyGgkddkctvlkleslesvsivesf..edSvifvklldddlilvvtlDGtills 68 
                 + i +s +g++++  ++d ++++ +++ ++   + ++f  +  v  +++l++  ++  + D t+ + 
  EPX74231.1 199 FDIRFSDDGQYLSTVSEDRTVRLWDIKKEIRL-LATGFghTARVWKCRFLSNSSLVTISEDLTLRKW 264
                 568899********************988765.4556611567999*********999999888443 PP

  == domain 2  score: 19.4 bits;  conditional E-value: 1.2e-07
   WD40_like   2 eiYsidiskkgslilyGgkddkctvlklesle...svsivesfedSvifvk..lldddlilvvtlDGtillsllenee..evenekieedistvkvidd 93 
                  i+si  s k +l+  Gg+d  ++  k ++++   s +i   f+  v  +   +l+ +++l+v+  G i  sll n+   +    +++ + +  +  ++
  EPX74231.1 284 HIWSIATSIKHDLLFTGGNDGAIRQWKNNNDTdtySFYISSIFNGDVSLSSfcFLSVNKLLCVAKNGEI--SLLDNKIwkSLPPFSLDSEATALCSWEN 380
                 699************************9998722245677889887765542279**************..7777766559999999988877665544 PP

   WD40_like  94 k.l.liGtnkGsiyvfskdlqleevll.gqsseIkeikie..nnkiysLsesafivf 145
                 k + ++Gt+ Gs+ +f     ++   +  ++s+I+++ +   n++ y L ++af+  
  EPX74231.1 381 KnIaALGTKIGSVVIFHCANPSNCCSVeVHTSKIQHLYTAfdNGFYYLL-SKAFVGK 436
                 424269*********987633333333158899*999653315555555.5566644 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.03
   WD40_like 196 egkPecillvddylivGgsfkyllliNiklnvntfklrl....evegiskikkisefvvafsT 254
                    P c+ ++d+++++G    +l +  +  +++ f  r     +++    +++i +++v + T
  EPX74231.1 466 TFDPTCLTVSDNMVFIGSRSGSLSIYKVGDSSSLFCWRRlhefDTICSIVLESIMDNTVSLKT 528
                 556888888888888888888888877777777666554342233333334456666665555 PP

  == domain 4  score: -0.5 bits;  conditional E-value: 0.13
   WD40_like   5 sidiskkgslilyGgkddkctvlkleslesvsivesf 41 
                 ++  ++kg+l + G++d ++ + k+e ++++ +++s 
  EPX74231.1 655 AMCSNPKGNLTVSGAEDTNILLSKFEKEDQIDVLNSV 691
                 5566889999999999999999999999999887765 PP

  == domain 5  score: -0.3 bits;  conditional E-value: 0.12
   WD40_like  26 vlkleslesvsivesfedSvifvklldddlilvvtlDGtillsllenee 74 
                 ++ +  le+ s  e    Sv  v +l +dl+l +++D  i l+ ++ e 
  EPX74231.1 899 IVYVAVLEEFSHPEAHASSVTGVIQLREDLFLSTSVDQRI-LTWINREG 946
                 5666666777777888899999****************99.55555554 PP

>> Kelch_6  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.0    0.0018         8       5      34 ..      67     105 ..      64     110 .. 0.82
   2 ?   -1.4   0.0      0.76   3.4e+03      25      39 ..     236     250 ..     231     256 .. 0.80
   3 ?   -1.9   0.0       1.1   4.7e+03      29      44 ..     754     769 ..     753     772 .. 0.84
   4 ?   -1.2   0.1      0.66     3e+03      24      47 ..     780     803 ..     774     806 .. 0.77

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0018
     Kelch_6   5 hslvsvggkiYifGGytds..........spylnkvwvyd 34 
                 h + ++++ + i+GGy+ +          ++++ + w+++
  EPX74231.1  67 HGMLACQNGLLIWGGYNIGmvdwntweifWTRTTD-WIFN 105
                 78899************988887777777777777.6666 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.76
     Kelch_6  25 pylnkvwvydpetks 39 
                  ++ +vw++++ ++s
  EPX74231.1 236 GHTARVWKCRFLSNS 250
                 4589******99997 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 1.1
     Kelch_6  29 kvwvydpetksWeqlp 44 
                 ++ + d++tk++e l+
  EPX74231.1 754 DLRITDVSTKKIESLG 769
                 56789*******9886 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 0.66
     Kelch_6  24 spylnkvwvydpetksWeqlpplp 47 
                 s++++++++y+   + +++l + +
  EPX74231.1 780 SNSTSRLYLYNENKRDFQFLKSWE 803
                 46789******9888888876655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (985 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       461  (0.0257125); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.69u 0.27s 00:00:00.96 Elapsed: 00:00:00.44
# Mc/sec: 6707.70
//
Query:       EPX74232.1  [L=765]
Description: translation elongation factor G [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      2e-60  203.7   0.3      2e-60  203.7   0.3    1.6  2  GTP_EFTU     Elongation factor Tu GTP binding domain
    1.1e-33  115.6   0.0    2.5e-33  114.4   0.0    1.6  1  EFG_IV       Elongation factor G, domain IV
    4.2e-31  106.8   0.0      1e-30  105.6   0.0    1.7  1  EFG_II       Elongation Factor G, domain II
    1.6e-22   79.3   0.0    3.6e-22   78.2   0.0    1.6  1  EFG_C        Elongation factor G C-terminus
    8.1e-11   42.2   0.1      2e-10   40.9   0.1    1.7  1  GTP_EFTU_D2  Elongation factor Tu domain 2
    1.5e-06   28.1   0.0    3.8e-06   26.7   0.0    1.7  1  RF3_C        Class II release factor RF3, C-terminal domain
    0.00094   19.6   0.0     0.0064   16.9   0.0    2.3  2  AvrPtoB_bdg  Avirulence AvrPtoB, BAK1-binding domain


Domain annotation for each model (and alignments):
>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  203.7   0.3   7.9e-64     2e-60       2     193 ..      54     345 ..      53     346 .. 0.91
   2 ?   -3.7   0.0       2.9   7.4e+03       7      22 ..     687     702 ..     687     702 .. 0.89

  Alignments for each domain:
  == domain 1  score: 203.7 bits;  conditional E-value: 7.9e-64
                 CEEEEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHHHHHST...HCHSHHHHHHTSCSSCEEEEEE...............TTCSSEEEEEEEESSSGG CS
    GTP_EFTU   2 rirnigiighvDhGKtTLtdrLlyktgaiskkgekaeeerv...lDtlkeErergiTiksaaisle...............ketkkylinliDtPGHvd 82 
                 +irnigi +h+D+GKtT+t+r+l++tg+i++ +e++++++v   +D+++ Ere+giTi+saa+++                + +k++ +n+iDtPGH+d
  EPX74232.1  54 NIRNIGISAHIDSGKTTFTERVLFYTGRIKDIHEVRGKDNVgakMDSMELEREKGITIQSAATHCTwsrtldqiqsenqenHASKEFAVNIIDTPGHID 152
                 89**********************************66555566**********************************98669**************** PP

                 GHHHHHHHHHT-SEEEEEEETTTBSTHHHHHHHHHHHHTTTEEEEEEESCGSTHHHHHHHHHHHHHHHHHH............................ CS
    GTP_EFTU  83 FskevirglrvlDgavlvvdaveGvepqteevlrlalkegvpiivfiNKmDrlkaelkeiveevkqklsrk............................ 153
                 F+ ev+r+lrvlDgavlv++av+Gv++qt +v r++++++vp++ fiNKmDr++a+  ++++++++kl+                              
  EPX74232.1 153 FTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRYNVPRVSFINKMDRMGADPWKVIQQINTKLKIPaaavqvpiggesemkgvvdliymraiyn 251
                 ********************************************************************666**************************** PP

                 ....................................................HHHHHHHHHTTT............TTEEEEEEBTTTTBTHHHHHHHH CS
    GTP_EFTU 154 ....................................................eeklekygekge............kevpvvfgSalkgegvktlleal 188
                                                                     e          +            k++pv++gSal++ gv+++l+a+
  EPX74232.1 252 hgdkgekveysdsipkdlqelaqekrsvliekladldeqiadmyvmeetpspE----------QlvqairrttlarKFTPVLMGSALSNIGVQPVLDAV 340
                 ****9999999999999999999999888888888877766655555555541..........15555555556668********************** PP

                 HHHSH CS
    GTP_EFTU 189 vellp 193
                  ++lp
  EPX74232.1 341 CDYLP 345
                 ***98 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 2.9
                 EEEESTTSSHHHHHHH CS
    GTP_EFTU   7 giighvDhGKtTLtdr 22 
                 ++ig vD+ K T++d+
  EPX74232.1 687 AVIGNVDKRKGTIVDS 702
                 599*********9985 PP

>> EFG_IV  Elongation factor G, domain IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.4   0.0   9.7e-37   2.5e-33       1     120 [.     540     665 ..     540     666 .. 0.95

  Alignments for each domain:
  == domain 1  score: 114.4 bits;  conditional E-value: 9.7e-37
                 TCCESCEE.SS-CCHCCCCCCCHTSSSHCCCCCEEEECCTT.......TTSSEEEEE--STCCCHCCCCHHHHCCCCCCTTS-TTTS--EESEEEEEEE CS
      EFG_IV   1 pqVayrEtirkpvkereeklkkqsggdgqyakvileiePle.......egsgnefvdetkggqvpkeyieavekGfqealkeGplagepvtdvkvtLld 92 
                 p+Va+rE+++k+v  +++ +kkqsgg+gqyakv   ie ++       +   +efv++++gg++p +yi+a+ek+f+e l++G l+g+p+ +++ +L d
  EPX74232.1 540 PRVAFRESLTKKVP-FSYLHKKQSGGAGQYAKVEGYIEYMDakeddagNVVDFEFVNKVTGGAIPSQYIPACEKAFRESLEKGFLIGHPIKNCRLVLED 637
                 89************.*******************99999888887655556799********************************************* PP

                 EE--TTTC-HHHHHHHHCHHHHHHHHCC CS
      EFG_IV  93 gslhevdsseaafkpaarralkeallkA 120
                 g++h vdsse+af++a+  a++ a+l+A
  EPX74232.1 638 GAYHPVDSSELAFRMATITAFRGAFLQA 665
                 **************************99 PP

>> EFG_II  Elongation Factor G, domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.6   0.0     4e-34     1e-30       1      75 []     466     539 ..     466     539 .. 0.96

  Alignments for each domain:
  == domain 1  score: 105.6 bits;  conditional E-value: 4e-34
      EFG_II   1 fPePvislaiepkskadedklskaLarlleEDptlrverdeeTketilsGmGelHleivverlkreykvevelgk 75 
                 +PePvisl+++pksk d+ ++skaL+r+++EDpt+rv+ d+e+keti+sGmGelHle++ver++rey ve+++gk
  EPX74232.1 466 VPEPVISLSLNPKSK-DTSNFSKALNRFQREDPTFRVKLDPESKETIISGMGELHLEVYVERMRREYRVECDTGK 539
                 8***********876.7789***************************************************9985 PP

>> EFG_C  Elongation factor G C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.2   0.0   1.4e-25   3.6e-22       1      88 [.     668     754 ..     668     755 .. 0.97

  Alignments for each domain:
  == domain 1  score: 78.2 bits;  conditional E-value: 1.4e-25
                 EEEEEEEEEEEEEECCCCCCHHHHHHHCT-EEEEEEEE.TTEEEEEEEEEGGG-TTHHHCHHHCTTTS-EEEEEEEEEEE--HHHHHH CS
       EFG_C   1 vllEPivkveievpeeyvgkvisdlssrrGeiedmeqdasgrviieaeiPlaeligfateLrslTkGegsfsmefsgYeevpgdklde 88 
                 ++lEPi++v i++p e++g+vi+++ +r+G+i d +   ++ + + ae+Pl++++ +++++r+lTkG+g+fsmef +Y ++p+ ++++
  EPX74232.1 668 IILEPIMNVSITAPVEHQGAVIGNVDKRKGTIVDSDIG-EEEFSLLAEVPLNNMFSYSSDIRALTKGKGEFSMEFLKYLPAPKYVQKD 754
                 59**********************************99.*******************************************999876 PP

>> GTP_EFTU_D2  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.9   0.1   7.7e-14     2e-10       1      74 []     387     453 ..     387     453 .. 0.95

  Alignments for each domain:
  == domain 1  score: 40.9 bits;  conditional E-value: 7.7e-14
                  EEEEEEEEEESEEETTEEEEEECTCTTSEEEEEEEEEEEEETEEESEEETTSEEEEEEEESSCCSGSSTTCEEE CS
  GTP_EFTU_D2   1 GtvalgrvysGtlkkGdevrilgndtskkeivtrissletfhededeavaganaGvivaikgledaiivGdtlt 74 
                  G++++ rvy+G lk+G ++++  + + k+    ++s+l ++h +  e+v++  aG i ai g+e+a   Gdt+t
   EPX74232.1 387 GQLTYLRVYQGSLKRGGYLYN--VNSTKR---IKVSRLVRMHSNDMEEVEETGAGGIGAIFGIECA--SGDTFT 453
                  78899****************..888789...*********************************7..9**985 PP

>> RF3_C  Class II release factor RF3, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   0.0   1.5e-09   3.8e-06       6      84 ..     464     543 ..     459     567 .. 0.83

  Alignments for each domain:
  == domain 1  score: 26.7 bits;  conditional E-value: 1.5e-09
                 EE--SEEEEEEESSGGG.HHHHHHHHHHHHHCTSSEEEEET.TSS-EEEEESSTHHHHHHHHHHHHHH---EEEEE-S-- CS
       RF3_C   6 sFaPElfarvrlkdplk.rkqlrkgleqLaeEGavqvfkeeeageelilgaVGqLQfeVveeRlknEYgvevrleslpys 84 
                  F PE   +++l+  +k + +++k+l+ ++ E  +   k + +++e+i++ +G+L +eV  eR+++EY+ve+++ + ++ 
  EPX74232.1 464 MFVPEPVISLSLNPKSKdTSNFSKALNRFQREDPTFRVKLDPESKETIISGMGELHLEVYVERMRREYRVECDTGKPRVA 543
                 578887777777666552578************99999999899***************************998766555 PP

>> AvrPtoB_bdg  Avirulence AvrPtoB, BAK1-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0         1   2.7e+03      55      71 ..      54      70 ..      37      79 .. 0.83
   2 !   16.9   0.0   2.5e-06    0.0064      32      85 ..     304     357 ..     288     363 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1
                 HHHCTT--S----SS-B CS
  AvrPtoB_bdg 55 alqnvginpsidlgesl 71
                  ++n+gi   id g++ 
   EPX74232.1 54 NIRNIGISAHIDSGKTT 70
                 5789********99875 PP

  == domain 2  score: 16.9 bits;  conditional E-value: 2.5e-06
                  HHHHHHHHHHHHH-----HHHHHHHHCTT--S----SS-BS--HHHHHHHHHHH CS
  AvrPtoB_bdg  32 ehlrtalerhvmqrlpipldigsalqnvginpsidlgeslvqhpllnlnvalnr 85 
                  e+l  a+ r  + r   p+ +gsal n+g++p +d     +  p    nvaln 
   EPX74232.1 304 EQLVQAIRRTTLARKFTPVLMGSALSNIGVQPVLDAVCDYLPAPYEVENVALNA 357
                  78999*******************************99999****999***996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (765 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       570  (0.0317921); expected 358.6 (0.02)
Passed bias filter:                      492  (0.0274416); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.63u 0.29s 00:00:00.92 Elapsed: 00:00:00.43
# Mc/sec: 5332.49
//
Query:       EPX74233.1  [L=192]
Description: ER protein translocation subcomplex subunit Sec66 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.1e-56  188.3   0.1    1.1e-55  188.1   0.1    1.0  1  Sec66     Preprotein translocase subunit Sec66


Domain annotation for each model (and alignments):
>> Sec66  Preprotein translocase subunit Sec66
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.1   0.1   5.9e-60   1.1e-55       2     176 ..       2     173 ..       1     177 [. 0.96

  Alignments for each domain:
  == domain 1  score: 188.1 bits;  conditional E-value: 5.9e-60
       Sec66   2 vslytPliYvavligslatfsslyrkrkakklael.epwFpenlqrdiYlsllhlekkkeekvpekvlkAALLrravedirrilklreskpalevllqk 99 
                 +s+y+Pl+Yvavli++++ +s++ rk++    + + e+wF++n +r+ ++ ll++    ++ vp++v+kA L+ ra+e++r++++l++s++al+vll++
  EPX74233.1   2 ISIYAPLVYVAVLISAMYGVSVFVRKSRTIPNEFVsEEWFGKNSARSYFFRLLEQ----NPPVPDTVIKAGLVLRATEALRQLMRLKSSRMALNVLLNR 96 
                 89************************99988888779*****************9....669************************************* PP

       Sec66 100 GsvgddlwqrfqraekeleeElkdvvqeaealkpgWgqtifqsaneilanealrrrleeiekrkeeekeewekkkad 176
                 G vgddl+++f+r eke+e+El+d++++a++l+pgW+q+ifq++nei++ne++ +++++i ++ e+++ +w+ +k+ 
  EPX74233.1  97 GGVGDDLVRKFSRLEKETELELMDIAKTANSLQPGWNQFIFQTCNEIIENEKILEHIDQIPNDLEQISIRWSGEKQL 173
                 ***********************************************************************999775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       683  (0.0380947); expected 358.6 (0.02)
Passed bias filter:                      514  (0.0286686); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.28s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 1316.03
//
Query:       EPX74234.1  [L=216]
Description: ER chaperone SHR3 ue Psh3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.2e-38  129.7   5.5    7.4e-38  129.4   5.5    1.0  1  SHR3_chaperone  ER membrane protein SH3
  ------ inclusion threshold ------
      0.011   15.8  13.1      0.016   15.3   2.1    2.1  2  DHHC            DHHC palmitoyltransferase


Domain annotation for each model (and alignments):
>> SHR3_chaperone  ER membrane protein SH3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.4   5.5   8.3e-42   7.4e-38       5     183 ..      18     195 ..      14     201 .. 0.90

  Alignments for each domain:
  == domain 1  score: 129.4 bits;  conditional E-value: 8.3e-42
  SHR3_chaperone   5 vataliigstsFflGvlfanfpyDynlLwssesteeafdaalehykflhaspplikrilhiviglgliglliklykpsednllFdgaSLvLyvvg 99 
                     +++  +++stsF+l++lf +  +Dy +Lw ++  e++f++a+++y++l+++  + k+ +++v++ g++ +li++ k + d+ l+ ++S +Ly+++
      EPX74234.1  18 LSRLGVLMSTSFCLALLFVSSIVDYYTLW-NPGPESSFTSAETYYTLLANASVYHKYFFYFVVASGMVFHLIQANKVTGDDRLYYYSSTLLYITA 111
                     667789***********************.677778*********************************************************** PP

  SHR3_chaperone 100 vvvyitnivkglrtvtegawgevdredslkvlaasntilalvLvGVlvLQaGqwYaerkeqeeleefeeeeaeeaaakaeekak 183
                     +v++i n+ +++ t++ + + ++dr+++  vl+as++++ ++L+GVl+LQ G+ +a +  +    e++ee+++eaa+++ ++++
      EPX74234.1 112 TVIFIVNVSPAIITAKLRRYVQFDRNMHFMVLGASQVLIGFLLAGVLLLQLGHLFALHVTAIVQSEYTEEQSNEAAEQEISTTD 195
                     ********************************************************9977777766666666666665544443 PP

>> DHHC  DHHC palmitoyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   3.6    0.0012        11      54     121 ..      23      90 ..      14      94 .. 0.79
   2 ?   15.3   2.1   1.8e-06     0.016      48     130 ..      99     182 ..      90     187 .. 0.66

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0012
        DHHC  54 fllylllllilalvlllialvklveeekkseflavtllkkllsilllvlsllfllllgllllfhlyli 121
                 +l++++++l+l +v +++ +++l++   +s+f+ ++++++ll+  +++   +f++++++ ++fhl+++
  EPX74234.1  23 VLMSTSFCLALLFVSSIVDYYTLWNPGPESSFTSAETYYTLLANASVYHKYFFYFVVASGMVFHLIQA 90 
                 56777777777777777777777777777777888888888889999999999999999999999875 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 1.8e-06
        DHHC  48 ykyFllfllylllllilalv.lllialvklveeekkseflavtllkkllsilllvlsllfllllgllllfhlylilrnlTtiea 130
                   y+   lly++  +i+++     i+  kl ++ +++++  ++ l +  +++ ++l+ ++ll lg+l+  h++ i++   t e+
  EPX74234.1  99 LYYYSSTLLYITATVIFIVNvSPAIITAKLRRYVQFDRNMHFMVLGASQVLIGFLLAGVLLLQLGHLFALHVTAIVQSEYTEEQ 182
                 45665555555544444443144455555555555555555556666789**************************77655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1185  (0.066094); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1583.18
//
Query:       EPX74235.1  [L=445]
Description: metaxin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-30  105.7   0.4    3.3e-30  105.0   0.4    1.4  1  Tom37     Outer mitochondrial membrane transport complex prot
    6.4e-10   38.7   0.2    1.8e-09   37.3   0.2    1.8  1  GST_C_6   Glutathione S-transferase, C-terminal domain
    2.5e-09   37.8   0.1    5.7e-09   36.6   0.1    1.6  1  GST_N_4   Glutathione S-transferase N-terminal domain
    0.00085   19.3   0.2     0.0021   18.1   0.0    1.8  2  GST_C_2   Glutathione S-transferase, C-terminal domain


Domain annotation for each model (and alignments):
>> Tom37  Outer mitochondrial membrane transport complex protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.0   0.4   7.3e-34   3.3e-30       1     124 [.      20     141 ..      20     142 .. 0.97

  Alignments for each domain:
  == domain 1  score: 105.0 bits;  conditional E-value: 7.3e-34
       Tom37   1 Claviaylkllal.apfevvessnpslsptgeLPaLkdgegtwisgfdnIveylrkkseesdldaslsakekadatAlisllesklaplllyslyvnse 98 
                 Cla+i y++l+   ++f + ++ n+s+spt++LPaL dg+ tw+ ++++++ yl++k  ++dld++l++++  + tA+++ll++++++l+l+  yv ++
  EPX74235.1  20 CLAAILYCSLAVPkDEFVIYQTANASMSPTQKLPALWDGH-TWVGSLNPVLFYLKQK--GYDLDNQLDKDALSKITAFSCLLQRNAYDLWLFKAYVCED 115
                 *********5555***********************9999.9**************9..**************************************** PP

       Tom37  99 nyekvTrpayskllpfPlnyilplkl 124
                 ny +v rp +sk+l fP+ny++p+++
  EPX74235.1 116 NYVRVMRPEWSKVLGFPFNYTTPNAF 141
                 ***********************987 PP

>> GST_C_6  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.3   0.2     4e-13   1.8e-09       9      64 .]     205     262 ..     197     262 .. 0.83

  Alignments for each domain:
  == domain 1  score: 37.3 bits;  conditional E-value: 4e-13
     GST_C_6   9 selLgdkkyFfGdkPtslDAlvFGhlaqilyt.plespelrellk.eypNLvayceri 64 
                   l gd++y+fG++PtslD+l++++l +   t ++++ +lr+ ++ + p+L ++ e +
  EPX74235.1 205 ELLVGDSEYLFGERPTSLDCLLYAFLSFHALTeNFDQLTLRSTMQsSAPKLFRLLESM 262
                 4455********99************777666477777*************9988776 PP

>> GST_N_4  Glutathione S-transferase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.6   0.1   1.3e-12   5.7e-09       1      99 []      18     116 ..      18     116 .. 0.94

  Alignments for each domain:
  == domain 1  score: 36.6 bits;  conditional E-value: 1.3e-12
     GST_N_4   1 pfclkletyLrmagip..yelepssne.mhaspkgklPfielngelliadsefiieflkekgvdldaelseeqkadaralkalveeklynallyerwld 96 
                 p+cl++  y+ +a  +  + + +++n  m  sp++klP +  +++  + + ++++ +lk+kg+dld++l+++  ++  a+ +l++ + y+++l+  ++ 
  EPX74235.1  18 PSCLAAILYCSLAVPKdeFVIYQTANAsM--SPTQKLPALWDGHT-WVGSLNPVLFYLKQKGYDLDNQLDKDALSKITAFSCLLQRNAYDLWLFKAYVC 113
                 89*******99998878899999***879..***********999.************************************************99987 PP

     GST_N_4  97 pen 99 
                 ++n
  EPX74235.1 114 EDN 116
                 766 PP

>> GST_C_2  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   4.6e-07    0.0021      18      47 ..     204     233 ..     178     261 .. 0.72
   2 ?   -3.4   0.0       2.2     1e+04      27      38 ..     329     340 ..     318     346 .. 0.56

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 4.6e-07
                 CTTT---SS.CTTCS--HHHHHHHHHHHHH CS
     GST_C_2  18 leahLadspflfGdqptlaDialapflvrl 47 
                 le + +ds +lfG++pt  D+ l++fl + 
  EPX74235.1 204 LELLVGDSEYLFGERPTSLDCLLYAFLSFH 233
                 444556777*****************9874 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2.2
                 .CTTCS--HHHH CS
     GST_C_2  27 flfGdqptlaDi 38 
                 f++ ++++++ +
  EPX74235.1 329 FILASTFGFVWF 340
                 666666665544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (445 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       679  (0.0378716); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.28s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 3137.92
//
Query:       EPX74236.1  [L=276]
Description: phosphatidic acid phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.9e-30  104.1   1.7    7.5e-30  103.5   1.7    1.3  1  PAP2      PAP2 superfamily
    0.00019   21.2   2.8    0.00053   19.7   2.8    1.7  1  PAP2_3    PAP2 superfamily
  ------ inclusion threshold ------
       0.02   14.8   0.1      0.048   13.6   0.1    1.7  1  DUF5510   Family of unknown function (DUF5510)
       0.05   13.4   0.0       0.67    9.7   0.0    2.4  2  MNHE      Na+/H+ ion antiporter subunit
       0.11   12.0   4.4      0.038   13.6   1.2    1.9  2  YhhN      YhhN family
        2.2    9.0   6.4       0.31   11.8   0.7    2.5  4  PrgI      PrgI family protein


Domain annotation for each model (and alignments):
>> PAP2  PAP2 superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.5   1.7   2.5e-33   7.5e-30       2     132 ..      97     244 ..      96     248 .. 0.94

  Alignments for each domain:
  == domain 1  score: 103.5 bits;  conditional E-value: 2.5e-33
        PAP2   2 llalllalalaalltsvlKdlvgrpRPfflaeetkldtqvstletses.............keakesfPSgHsafafalalllalllrrkrkkig.... 83 
                 l+ ll++ +l++l+++v+K++vgrpRP+f+a++++l++++ t     +             +++ +sfPSgH+af+fa++ +l+l++++  + ++    
  EPX74236.1  97 LMGLLYSTMLSGLIVTVIKNTVGRPRPDFIARCNPLSSSPHTGLV--DlhvcttsweshilQDGLRSFPSGHTAFSFAGLGYLSLFIASQLRMFRkkts 193
                 689***********************************9765443..357**************************************9999988899* PP

        PAP2  84 ..lvllalillllavlvalsRlylgvHflsDvlaGlliGialaalayrlvq 132
                    +++++++l+la+++++sR  +++H++ D+++G ++G a+a+++yr+ +
  EPX74236.1 194 swAIIITVLPLMLATWIGISRNEDYRHHVEDIVVGGFLGMAIAYVCYRQIF 244
                 ************************************************976 PP

>> PAP2_3  PAP2 superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   2.8   1.8e-07   0.00053      12     189 ..      42     237 ..      37     238 .. 0.62

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 1.8e-07
      PAP2_3  12 ldweaalnklllahpa.lavilalaYaslhfqvtllvlvllf...lrrrerlreflttlllatll.gllvyalfPaagPrlleeagfvdtvaaaslag. 104
                 ++ e +l++l+ +hp   +    ++Y  ++ + ++ ++++ f   ++ +  +++ l  ll++t+l gl+v +   ++g    + ++f+   ++ s +  
  EPX74236.1  42 FQREFSLEDLTISHPYaKHERVPTMYLGIIALPLPGLILYGFgrfRKSPLLFWKSLMGLLYSTMLsGLIVTVIKNTVGR---PRPDFIARCNPLSSSPh 137
                 6667777777777777334456667776555555555554443224445566666666677777645555555555554...44555554444444445 PP

      PAP2_3 105 ..alrdgasravllrgtienglaafPSlHvawal.......lvalalwrlrrkr......llrvlalllnvlmivatvatgnHYlvDviaGvalalvai 188
                     +++   +++ ++ +++gl +fPS H+a+++       l+++   r+ rk+      +++vl l+l+ ++ ++      H + D+++G +l+++++
  EPX74236.1 138 tgLVDLHVCTTSWESHILQDGLRSFPSGHTAFSFaglgylsLFIASQLRMFRKKtsswaiIITVLPLMLATWIGISRNEDYRHHVEDIVVGGFLGMAIA 236
                 666677778889999****************986333333334444455555553554444555555566667777777889************99998 PP

      PAP2_3 189 a 189
                 +
  EPX74236.1 237 Y 237
                 7 PP

>> DUF5510  Family of unknown function (DUF5510)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   1.6e-05     0.048      33      53 ..     225     245 ..     197     253 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.6e-05
     DUF5510  33 iviGtilGlacayftykyiip 53 
                 iv+G  lG+a ay  y+ i p
  EPX74236.1 225 IVVGGFLGMAIAYVCYRQIFP 245
                 9******************98 PP

>> MNHE  Na+/H+ ion antiporter subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.12   3.7e+02       6      27 ..      92     114 ..      66     144 .. 0.66
   2 ?    9.7   0.0   0.00022      0.67       3      52 ..     204     256 ..     202     272 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.12
        MNHE   6 lvWllltgs.lgelllGlllall 27 
                 l+W  l+g  ++++l Gl++ ++
  EPX74236.1  92 LFWKSLMGLlYSTMLSGLIVTVI 114
                 34444444455555555555444 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00022
        MNHE   3 llflvWllltgs......lgelllGlllallvalllrrlllplrrvllrllayllv 52 
                 l++++W+ ++ +      ++++++G +l++++a++++r ++p++     +la +++
  EPX74236.1 204 LMLATWIGISRNedyrhhVEDIVVGGFLGMAIAYVCYRQIFPPV---DDALANIPY 256
                 57889999999999999*******************76554443...333344444 PP

>> YhhN  YhhN family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.1       2.3   6.8e+03     107     115 ..      26      34 ..      16      45 .. 0.54
   2 ?   13.6   1.2   1.3e-05     0.038      48      99 ..     157     210 ..     139     249 .. 0.74

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 2.3
        YhhN 107 kipvlvYal 115
                  ++ l+Y +
  EPX74236.1  26 LLVALCYFI 34 
                 222233333 PP

  == domain 2  score: 13.6 bits;  conditional E-value: 1.3e-05
        YhhN  48 kkkrsfllGlvaFllaHilYivafl..eqratstlslllllllllaaavllall 99 
                 +  rsf  G  aF +a + Y+ +f+  + r++++ +  +++++ ++ ++l+ ++
  EPX74236.1 157 DGLRSFPSGHTAFSFAGLGYLSLFIasQLRMFRKKTSSWAIIITVLPLMLATWI 210
                 5668999*******************9666666666666666666666666663 PP

>> PrgI  PrgI family protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1       3.2   9.5e+03      29      42 ..      25      38 ..      22      44 .. 0.60
   2 ?   -2.1   0.0       2.3   6.7e+03      52      65 ..      69      85 ..      53     101 .. 0.58
   3 ?   11.8   0.7    0.0001      0.31      27      65 ..     170     214 ..     166     244 .. 0.74
   4 ?   -1.3   0.0       1.3   3.8e+03      25      43 ..     226     243 ..     223     254 .. 0.56

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 3.2
        PrgI 29 llvaiglylllraf 42
                ll+++++y++l + 
  EPX74236.1 25 LLLVALCYFILDVT 38
                44566667766554 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 2.3
        PrgI 52 illavP...vaalgfyk 65
                 ++a+P   +++ gf +
  EPX74236.1 69 GIIALPlpgLILYGFGR 85
                33444422433335544 PP

  == domain 3  score: 11.8 bits;  conditional E-value: 0.0001
        PrgI  27 lallvaiglylllrafl...eelasvlvillavPvaalgfy...k 65 
                 ++++++++ +++ +++    ++++s+++i++++P+++  ++   +
  EPX74236.1 170 SFAGLGYLSLFIASQLRmfrKKTSSWAIIITVLPLMLATWIgisR 214
                 45556777777777665668*****************99985542 PP

  == domain 4  score: -1.3 bits;  conditional E-value: 1.3
        PrgI  25 lvlallvaiglylllrafl 43 
                 +v+++l ++++++++++ +
  EPX74236.1 226 VVGGFL-GMAIAYVCYRQI 243
                 344444.555555554443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (276 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       433  (0.0241508); expected 358.6 (0.02)
Passed bias filter:                      296  (0.0165096); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.47u 0.28s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 1854.01
//
Query:       EPX74237.1  [L=223]
Description: DUF1769 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      6e-25   87.2   0.6      1e-24   86.5   0.6    1.4  1  DUF1769   Protein of unknown function (DUF1769)


Domain annotation for each model (and alignments):
>> DUF1769  Protein of unknown function (DUF1769)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.5   0.6   5.7e-29     1e-24       1      55 []      71     125 ..      71     125 .. 0.99

  Alignments for each domain:
  == domain 1  score: 86.5 bits;  conditional E-value: 5.7e-29
     DUF1769   1 GddllfGndfdrpirdrlPpgfsaalkfakfiDpglegDlyadkPylyspllssm 55 
                 +dd+lfGn+fd+p+rd lP+g+s+++k +k++Dp++e+Dly+d+P+++sp++++m
  EPX74237.1  71 ADDILFGNQFDKPLRDILPTGSSYMMKGLKLVDPAIEYDLYCDRPWAFSPFYATM 125
                 89****************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (223 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       256  (0.0142785); expected 358.6 (0.02)
Passed bias filter:                      247  (0.0137766); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1626.67
//
Query:       EPX74238.1  [L=123]
Description: recombination protein Saw1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.081   13.2   0.0       0.14   12.5   0.0    1.4  1  MG3       Macroglobulin domain MG3


Domain annotation for each model (and alignments):
>> MG3  Macroglobulin domain MG3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   7.6e-06      0.14      34      73 ..      64     107 ..      60     120 .. 0.62

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 7.6e-06
                 TS-B---EEEEEEEE......E-SSS-EEE-..--EEEE-BTTEEE CS
         MG3  34 yGkpVkGkvkvtlclk....qkdkkkkkeee..qiekelekdGcgs 73 
                 y +pV+G++ v++++k    +  + +++ee+  + + el+ +G +s
  EPX74238.1  64 YSEPVQGHALVEIGRKfvqpK--EPQDEEEKdlKPTLELQYQGSMS 107
                 999************976431..22222222343344444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       428  (0.0238719); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.27s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 904.03
//
Query:       EPX74239.1  [L=179]
Description: rRNA processing protein Tsr2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-21   76.2   0.1      5e-21   75.1   0.1    1.6  1  WGG       Pre-rRNA-processing protein TSR2
  ------ inclusion threshold ------
      0.024   14.8   0.8        0.1   12.8   0.1    2.0  2  RRP7      Ribosomal RNA-processing protein 7 (RRP7) C-termina


Domain annotation for each model (and alignments):
>> WGG  Pre-rRNA-processing protein TSR2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.1   0.1   5.6e-25     5e-21       1      79 [.      12      91 ..      12      92 .. 0.95

  Alignments for each domain:
  == domain 1  score: 75.1 bits;  conditional E-value: 5.6e-25
         WGG  1 FeegvalilhlWtaLklavengwggpdsadkrdwlagaivdlfkakeeldqedvedvLlqvmedeFev.nveDdSaeevA 79
                Fe +   ++  W+ ++ av ++w + d+adkrdw+agaivd++ +++++d++d+e+++lq+++deF+v  +eDdS++  A
  EPX74239.1 12 FEYAAGVLICCWPIMRQAVAEEWADVDTADKRDWMAGAIVDYICSAKDVDPYDIEELILQILQDEFNVgSIEDDSPYILA 91
                7777888999**********************************************************88*****99877 PP

>> RRP7  Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1     0.079   7.1e+02      13      32 ..     115     134 ..      99     145 .. 0.55
   2 ?   12.8   0.1   1.1e-05       0.1      31      50 ..     158     177 ..     148     179 .] 0.75

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.079
        RRP7  13 evdeymeefdkeeeeekkee 32 
                 ++ + m e +++ee+++k++
  EPX74239.1 115 HLGKPMVEKQEREENRNKKS 134
                 44444443333333333332 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 1.1e-05
        RRP7  31 eekkkeeevDeDGfvtVtrg 50 
                 ee+ k+ +vD+DGf++V+r+
  EPX74239.1 158 EEESKAPTVDDDGFTVVQRK 177
                 44455589**********93 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       607  (0.0338558); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1267.25
//
Query:       EPX74240.1  [L=98]
Description: ribosomal protein subunit S17 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-20   73.3   0.9    1.5e-20   73.0   0.9    1.1  1  Ribosomal_S17  Ribosomal protein S17


Domain annotation for each model (and alignments):
>> Ribosomal_S17  Ribosomal protein S17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.0   0.9   8.4e-25   1.5e-20       1      68 []       7      73 ..       7      73 .. 0.97

  Alignments for each domain:
  == domain 1  score: 73.0 bits;  conditional E-value: 8.4e-25
                   EEEEE--STTEEEEEEEEEEEETTTTEEEEEEEEEEEE-TTTS--TT-EEEEEEECECSSSEEEEEEE CS
  Ribosomal_S17  1 GvVvsdkmdkTvvVrverlvkhpkykkyvkrrkkylahdennsvkvGDiVrieecrPlSktkrfvvve 68
                   G+V+s+ m kT++Vrv + + hp +kkyv++ ++y++ d    + vGD V i+ crP S tkrf++++
     EPX74240.1  7 GIVISNFMPKTAKVRVAKEKFHPVIKKYVTKYQNYMVQDDRG-CGVGDAVVIQPCRPRSATKRFEIIK 73
                   99*************************************988.*********************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       656  (0.0365888); expected 358.6 (0.02)
Passed bias filter:                      508  (0.028334); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.28s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 682.34
//
Query:       EPX74241.1  [L=160]
Description: 6,7-dimethyl-8-ribityllumazine synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      7e-52  175.0   0.0    8.1e-52  174.8   0.0    1.0  1  DMRL_synthase  6,7-dimethyl-8-ribityllumazine synthase


Domain annotation for each model (and alignments):
>> DMRL_synthase  6,7-dimethyl-8-ribityllumazine synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  174.8   0.0   4.5e-56   8.1e-52       2     136 ..      18     153 ..      17     157 .. 0.95

  Alignments for each domain:
  == domain 1  score: 174.8 bits;  conditional E-value: 4.5e-56
                    EEEEEEEESTTHHHHHHHHHHHHHHHHH.CTTSSCCEEEEEESSCCCHHHHHHHHCTSTT-.SEEEEEEEEE--SSCHHHHHHHHHHHHHHHHHHH CS
  DMRL_synthase   2 lriaiVvarfneeitdkllegaldelke.agvaeenidvvtVPGafElplaakklaesskyldavialGvvirGetphfeyvaeavskglmrvsld 96 
                    lri+iV+ar+n + ++ l++ga++++   +gv++enidv +VPG++Elp+ ++++++s++y davi +Gv+i+G+t+hfey++eav +glmr+ ld
     EPX74241.1  18 LRILIVHARWNLQAIEPLVKGAVNKMIHhHGVKAENIDVRSVPGSWELPVGIRSFMASNSY-DAVIGIGVLIKGSTMHFEYISEAVVHGLMRIGLD 112
                    8**********************99877367**************************7657.********************************** PP

                    CTS-EEEEEEEESSHHCCHHCCTSTC.CCHHHHHHHHHHHH CS
  DMRL_synthase  97 tgvPvifgvltvdteeqaleraggka.gnkGeeaaeaalem 136
                    ++vPvi g+ltv +eeqal rag ++ +n+G ++++aa+em
     EPX74241.1 113 SNVPVILGLLTVLNEEQALYRAGLNGgHNHGDDWGSAAVEM 153
                    ***********************7667*************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       307  (0.0171231); expected 358.6 (0.02)
Passed bias filter:                      282  (0.0157287); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.27s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1205.81
//
Query:       EPX74242.1  [L=72]
Description: hypothetical protein SOCG_03454 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.093   11.8   0.1      0.096   11.8   0.1    1.0  1  DUF1749   Protein of unknown function (DUF1749)


Domain annotation for each model (and alignments):
>> DUF1749  Protein of unknown function (DUF1749)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   5.4e-06     0.096     203     229 ..      14      39 ..       4      53 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 5.4e-06
     DUF1749 203 svdgdDDfFssDlsdeklektfGkvke 229
                 +vd+dDD++ss+l  ++l+++  ++++
  EPX74242.1  14 EVDADDDYYSSELD-DDLKESIEQLEQ 39 
                 678**********5.578888887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       588  (0.032796); expected 358.6 (0.02)
Passed bias filter:                      513  (0.0286129); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.28s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 504.82
//
Query:       EPX74243.1  [L=335]
Description: telomere cap complex subunit Stn1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.4e-28   97.4   0.5    9.5e-28   96.8   0.5    1.2  1  Stn1             Telomere regulation protein Stn1
     0.0018   18.1   0.1     0.0038   17.1   0.1    1.5  1  RMI2             RecQ-mediated genome instability protein 2
  ------ inclusion threshold ------
      0.013   15.4   0.0      0.031   14.3   0.0    1.7  1  tRNA_anti-codon  OB-fold nucleic acid binding domain


Domain annotation for each model (and alignments):
>> Stn1  Telomere regulation protein Stn1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.8   0.5   1.6e-31   9.5e-28      17     175 ..      10     155 ..       2     174 .. 0.90

  Alignments for each domain:
  == domain 1  score: 96.8 bits;  conditional E-value: 1.6e-31
                 ---.......B--HHHHTT...........-B---------EEETTEEE-EEEEEEEEEEEEEE....TTEEEEEEE-SSS-EEEEEEEGGG-HHHHHH CS
        Stn1  17 rlsesydkatpllirdihkrldsSrrvgneisiyaslirdilfylnrpirrikvvGlvvgvkwklikgedkavlkiDDcsdkllkckcsksqllslgie 115
                 + +  + + +p++i d+++           i + +s+ ++i+f+ + p+ ++++vG+vv ++ +    ed+ +  +DDc+++ l+ ++s ++  sl+ +
  EPX74243.1  10 KHCTTLTRWNPMFINDVYS-----------IVFNGSTTQNIGFWFGSPVCWVQIVGYVVSLDVY----EDRCICVVDDCTGQSLRTVFSMQEKPSLAQK 93 
                 4455555556********9...........99999*****************************....******************************* PP

                 HTT-.TT-EEEEEEEEE.SSS-EEEEEEEEEE-STTHHHHHHHHHHHHHHHHHHHHHHH-XX CS
        Stn1 116 ival.iGstvavfGkln.reeveleveflelvkglesEiefWrkamllrkeLakpweldpek 175
                 ++ l +G+ v v Gk++  + v l++ +lel+++++ E++ W +++++r++L+k++ + ++k
  EPX74243.1  94 ASTLnPGNIVRVGGKIQrSHSVHLVAYKLELLEDPNAEWKEWLQRIHYRQNLQKMQFNLKQK 155
                 *****************55679*******************************987665555 PP

>> RMI2  RecQ-mediated genome instability protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.1   6.3e-07    0.0038      41     119 ..      47     133 ..      31     139 .. 0.74

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 6.3e-07
        RMI2  41 rvWlQ..Gtvvevdaske..sllldDgtgvfvveglnelpktk......kclkeGkYVmVvGvvqssspepvlkavKvvdLsenpdrea 119
                 + W+Q  G+vv++d  ++   +++dD tg  + +++ ++++++      ++l++G+ V V G +q+s++ ++  a K+  L + +   +
  EPX74243.1  47 VCWVQivGYVVSLDVYEDrcICVVDDCTGQ-SLRTVFSMQEKPslaqkaSTLNPGNIVRVGGKIQRSHSVHL-VAYKLELLEDPNAEWK 133
                 57999889****999888778899**9997.3444444333334445559**************77777665.5777777766555555 PP

>> tRNA_anti-codon  OB-fold nucleic acid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   5.1e-06     0.031       1      76 []      50     125 ..      50     125 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 5.1e-06
                      EEEEEEEEEEEEEEETTEEEEEEEETTEEEEEEEET....HHHHHHHTTS-TTSEEEEEEEEEECTTSSEEEEEEEEEEE CS
  tRNA_anti-codon   1 VtvaGrvtsisdrsggkvifidlrDgtgriqvvlfr....eeatklaenlkeGdvvrvtGrvkrrpggelelkveeiell 76 
                      V ++G v+s         +  +++D tg+   ++f+     +  + a++l +G +vrv G+++r+    + l++ ++ell
       EPX74243.1  50 VQIVGYVVSL--DVYEDRCICVVDDCTGQSLRTVFSmqekPSLAQKASTLNPGNIVRVGGKIQRSH-S-VHLVAYKLELL 125
                      6788888888..77777888999****7554455555889999999999****************6.4.78888888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (335 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       795  (0.0443416); expected 358.6 (0.02)
Passed bias filter:                      631  (0.0351944); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 2361.24
//
Query:       EPX74244.1  [L=658]
Description: hypothetical protein SOCG_03456 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (658 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1223  (0.0682135); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.64u 0.29s 00:00:00.93 Elapsed: 00:00:00.48
# Mc/sec: 4146.00
//
Query:       EPX74245.1  [L=299]
Description: phosphoribosylamidoimidazolesuccinocarboxamide synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   4.1e-101  337.8   0.0   5.1e-101  337.5   0.0    1.0  1  SAICAR_synt  SAICAR synthetase


Domain annotation for each model (and alignments):
>> SAICAR_synt  SAICAR synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  337.5   0.0  2.8e-105  5.1e-101       2     246 ..      15     268 ..      14     272 .. 0.95

  Alignments for each domain:
  == domain 1  score: 337.5 bits;  conditional E-value: 2.8e-105
                  EEE-SSEEEEE-SST.TEEEEEEESEEEECCCTEEEEETTHHHHHHHHHHHHHHHHHH.--BSEEEE...............-SSSEEEEE-EEEESE CS
  SAICAR_synt   2 lyeGKvrdvYeledd.dklllvakDrisAfdvvlkeeipgKGkvltqlsafwfeklek.ipnhliksld....pe......qlegrsmlvkklkmlpv 87 
                  +++GKvrd+Ye+e+  + ll+va+DrisA+dv+++++ip+KGk+lt++s+fwf++l++ +++h+++s +    p+      +l++r mlvkk+k+lp+
   EPX74245.1  15 VASGKVRDLYECEEFpSCLLFVATDRISAYDVIMENGIPNKGKILTKISEFWFSLLKEkVQTHIVTS-KwnemPQviqqhpELKDRCMLVKKFKILPI 111
                  799*********5546*****************************************66******66.44776337778899**************** PP

                  EEEEEEE--HHH.......HH....HH..T--TT-EEEEEEEEEEE--CCCT.S-EE-HHHHH.HTT-HHHHHHHHHHHHHHHHHHHHHHHHTTEEEE CS
  SAICAR_synt  88 EvvvRgyltGslwkeykksgkvcgirlpeglkegeklpepiftpstKaeegehDeniseeevvealgteeeaeeieelalavyekaaelaaergiilv 185
                  E++vRgyltGs+wkey+++g+v+gi++p++++ege +pep+ftpstKa+eg hDeni+ +++ +++g e+ a++++++a+++y+ a+++a ++gii++
   EPX74245.1 112 EAIVRGYLTGSAWKEYQTHGTVHGIQVPANMQEGEAFPEPLFTPSTKAAEG-HDENIHPDRMSSIIG-EDLAKQVAQTAVDLYKVARDYALQKGIIIA 207
                  **************************************************9.7**************.9***************************** PP

                  EEEEEEEEETTTTEEEEES--.STTTEEEEETTT.....GGGB-STHHHHTT-STHHHHHH CS
  SAICAR_synt 186 DtKlEFGldeedgelvLaDevltpDssRfwdaetyeegkeqeslDKqfvRdwleeveekwk 246
                  DtK+EFG+de ++++vL+DevltpDssRfw a +y++g +++s+DKqf+R+wl++++ + k
   EPX74245.1 208 DTKFEFGVDELTNKIVLVDEVLTPDSSRFWLAADYKVGASPDSFDKQFLRNWLTSNKLNGK 268
                  *******************************************************887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (299 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       435  (0.0242624); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.29s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 2084.51
//
Query:       EPX74246.1  [L=329]
Description: kinetochore protein Mis13 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.5e-58  196.4  10.0    9.2e-58  195.9  10.0    1.2  1  MIS13           Mis12-Mtw1 protein family
  ------ inclusion threshold ------
      0.012   14.6   0.8      0.012   14.6   0.8    1.5  2  Ran-binding     RanGTP-binding protein
      0.014   14.7   3.2       0.16   11.2   0.4    2.5  2  Radial_spoke_3  Radial spoke protein 3
      0.039   14.3   0.5      0.076   13.4   0.5    1.5  1  DUF4378         Domain of unknown function (DUF4378)
      0.086   11.9   0.1       0.24   10.4   0.0    1.7  2  Glyco_hydro_88  Glycosyl Hydrolase Family 88


Domain annotation for each model (and alignments):
>> MIS13  Mis12-Mtw1 protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  195.9  10.0   2.6e-61   9.2e-58       1     299 [.      45     320 ..      45     324 .. 0.91

  Alignments for each domain:
  == domain 1  score: 195.9 bits;  conditional E-value: 2.6e-61
                 XXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXX.......XXXXXXXC..CHHCCTSXTTSTCHHHHHHHHHHHHHHHHHHHC.......HTTT.TT CS
       MIS13   1 lpLsdteiilqekekkerarnkRrsslsqrGRRlSsLgtgftiaspHkdvpesefykhienslaeplrlrqLlnWclkralekleekakseskkeetee 99 
                 lp+sdt+ii++++  k r+++ Rrssl qrG+R+Ss+gtgf +a pH+dvp+ e+y+hi+++l+eplr++qLl+W++ + l++++      +k++et+e
  EPX74246.1  45 LPVSDTPIIKKNQ--KLRKSKGRRSSLGQRGKRASSIGTGF-EALPHADVPTDEYYRHISKDLSEPLRMKQLLLWASYKHLNQQR------EKYKETKE 134
                 69*******9888..677788999*****************.*******************************************......99****** PP

                 .HHHCHHHHHCCHCCHHHHCHHCHHCCHHHHHHCHHHTHCSTTGCCCSXXX....XXSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH...HH. CS
       MIS13 100 sdakkiarvIikeflrdlkkgkisidWeareeeeeedendteltklFedndkkklpnaknieneenlailkekikalknEikeWaklladskdpdkeiq 198
                 s++++iar+I++e+l++l  ++ si+W++r+++e        + +         +p+++n++n + l++l++++++l+ E+++W++++a + + +k++ 
  EPX74246.1 135 SSEAAIARSIVQEVLNELLSNQFSISWYQRPPNEI-------IPN---------KPHPQNLKNIQLLDELTAQLAKLQDEEATWRAVAAGTVENEKSLH 217
                 *******************************5554.......556.........5******************************************** PP

                 HHHHHHTT-.----------S--...HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTSTTTSSXXXXXXXXXXXXX...XXXXX CS
       MIS13 199 kekklvdse.akidsdtqepdta...qrilsdnanveskletkvDeLqdsvhkLdsaskalnelstqklqklsrllakrskkekkssesrkks.tkkLl 292
                 +   l+d+  +  ds+  ep+t    ++++s ++++ +++   v+ L++ +h ++s +     +++      +r++++++ +++k  + ++ s t++Ll
  EPX74246.1 218 SCRRLSDQIhSATDSTSHEPETSngtKEYQSSIKDIRKNITPLVESLSQHIHAIHSLTRIGPSVRSAFG---ERAAQSYLLHKQKFCKTNNHSdTMNLL 313
                 *********9999*********999999****************************9999999999999...55555555555444333333359**** PP

                 XXXXXXX CS
       MIS13 293 rglssss 299
                 r ls+s 
  EPX74246.1 314 RILSKSA 320
                 ****775 PP

>> Ran-binding  RanGTP-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.1       1.1   3.9e+03     104     126 ..     124     146 ..     115     155 .. 0.36
   2 ?   14.6   0.8   3.4e-06     0.012      95     183 ..     219     310 ..     182     319 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 1.1
  Ran-binding 104 eaaekeekskkkeeekeelkkvi 126
                  +  ek +++k+++e+  + + v+
   EPX74246.1 124 QQREKYKETKESSEAAIARSIVQ 146
                  22222222222222222222233 PP

  == domain 2  score: 14.6 bits;  conditional E-value: 3.4e-06
  Ran-binding  95 ieelgerleeaaekeekskk....keeekeelkkviedikeLLkrieeaiPllnLalttsGaslstslpksvSpsrLLqAstflsaadtqfaa 183
                   ++l++++++a+++++++ +    ++e ++++k++ ++i  L++++ ++i+ ++ +lt  G s+ ++  ++   s LL+ ++f ++++++ ++
   EPX74246.1 219 CRRLSDQIHSATDSTSHEPEtsngTKEYQSSIKDIRKNITPLVESLSQHIHAIH-SLTRIGPSVRSAFGERAAQSYLLHKQKFCKTNNHSDTM 310
                  45666666666666655444556699999************************8.9****************************999987655 PP

>> Radial_spoke_3  Radial spoke protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.1      0.01        36      32      83 ..      53     103 ..       7     109 .. 0.65
   2 ?   11.2   0.4   4.5e-05      0.16     192     229 ..     120     157 ..     116     159 .. 0.92

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.01
  Radial_spoke_3  32 aereaearrrklarkkakeqaerellktPepvegrkhidvqteeyLeeltdk 83 
                     ++++++ r+ k  r +  ++ +r  ++     e   h dv t+ey+  +++ 
      EPX74246.1  53 IKKNQKLRKSKGRRSSLGQRGKR-ASSIGTGFEALPHADVPTDEYYRHISKD 103
                     33333333333333333333333.3444566999************998876 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 4.5e-05
  Radial_spoke_3 192 rrlkqqkealkkeketaekiaaralakqylaellpsvl 229
                     + l+qq+e++k+ ke +e  +ar++++++l+ell++ +
      EPX74246.1 120 KHLNQQREKYKETKESSEAAIARSIVQEVLNELLSNQF 157
                     6789*****************************99876 PP

>> DUF4378  Domain of unknown function (DUF4378)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.5   2.1e-05     0.076      42     122 ..     127     203 ..     105     258 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 2.1e-05
     DUF4378  42 eekksss.sekkrreerserklLFDlvneiLaeilalelkrslaepsskvssakkrrkkklsgeqLleevwseieewlsse...e 122
                 e+      + k+++e  + r ++  + ne+L+  ++     ++ +p+++  + k++ +++l++ qLl+e+ +++ +++++e    
  EPX74246.1 127 EK----YkETKESSEAAIARSIVQEVLNELLSNQFSIS---WYQRPPNEIIPNKPH-PQNLKNIQLLDELTAQLAKLQDEEatwR 203
                 22....2345666799999***************9865...888888777666665.889**************98655555541 PP

>> Glyco_hydro_88  Glycosyl Hydrolase Family 88
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0      0.34   1.2e+03     243     273 ..     120     153 ..      83     165 .. 0.57
   2 ?   10.4   0.0   6.7e-05      0.24     208     243 ..     170     206 ..     166     219 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.34
                     TT-TT.TTSSBEH..HHHHHHHHHHHHHHHTTSS CS
  Glyco_hydro_88 243 lddgs.kesylEt..SatalfvygLakgvnkgll 273
                      + ++ +e+y+Et  S  a ++ ++ ++v + ll
      EPX74246.1 120 KHLNQqREKYKETkeSSEAAIARSIVQEVLNELL 153
                     3333334555554335556666777777777666 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 6.7e-05
                     S-T.T-TTHHHHHHHHHHHHHHHHCTS-TTSSEBSBT CS
  Glyco_hydro_88 208 Lpe.kekarqelinllrdlvkalaklqdeeglWhqil 243
                     +p+  +++  + i+ll++l+ +laklqdee +W+++ 
      EPX74246.1 170 IPNkPHPQNLKNIQLLDELTAQLAKLQDEEATWRAVA 206
                     666468999999*********************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (329 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1502  (0.0837749); expected 358.6 (0.02)
Passed bias filter:                      629  (0.0350828); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.44
# Mc/sec: 2258.76
//
Query:       EPX74247.1  [L=556]
Description: spermine family transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.4e-35  120.3  31.0    8.4e-35  120.3  31.0    1.9  2  MFS_1     Major Facilitator Superfamily
    2.6e-06   26.6  28.1    1.3e-05   24.3  28.1    2.1  1  Sugar_tr  Sugar (and other) transporter
     0.0024   17.7   0.8        3.2    7.5   0.0    3.5  3  DUF3464   Photosynthesis affected mutant 68


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.3  31.0   1.4e-38   8.4e-35       3     353 .]     126     507 ..     125     507 .. 0.81
   2 ?   -1.2   5.5      0.13   7.6e+02     122     173 ..     491     542 ..     488     555 .. 0.72

  Alignments for each domain:
  == domain 1  score: 120.3 bits;  conditional E-value: 1.4e-38
       MFS_1   3 laaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslwlllvlrvlqGlgaga 101
                 l++++sa+++s+++  l  ++++dl++ p +++l ++l  +g++v+ l++++ls+ +Grr v+l++l+++++  + +++a+++  ll++r+++G ++++
  EPX74247.1 126 LLVICSAFGSSVIAGDLE-HVSRDLNVGPEVANLSCSLMVVGFGVGPLIISPLSEMYGRRIVYLVTLAIYIILQIPCALANNIACLLICRFFAGCFGCS 223
                 6789*************9.******************************************************44444668888*************** PP

       MFS_1 102 lfpagaaliadwfpkeergraigllsagfslGailgpllgglla.sslgWravfyilaivsllafvlfllllpeepperkrkspkeee........... 188
                  +++++ +++d++  ++rg+ai++++ag  +G+ +gpl+gg++      +r++f+++ i ++++ +     lp +++  +    ++             
  EPX74247.1 224 PLTLAGGVLSDIWETRQRGLAIAFFAAGPYAGPTIGPLVGGWVGvGTDDFRWIFWVNMIYMFVMYI---TMLPIPETYAPVLLRWRAQkirketgrqvf 319
                 ********************************************44444***************99...889888888888888888788877777777 PP

       MFS_1 189 ...........kgtgpaplvpawkallkdpvlw..illialllfffgfsglltllplylqevlgls.glllaglllallalvgailallagrlsdr... 270
                            + ++   l+ ++++l + p l+  ++ ial+++   ++g+++  p  +++  g++ g +++  l+ ++ lvg+++al ++ ++ r   
  EPX74247.1 320 taqekqmlslkEIVQVNLLR-PITLLMTEPILLsiSCYIALIYA--LLYGYFFAYPNVFVKGKGYNeG-ITG--LMFIPVLVGVAFALATTPFLERqym 412
                 77666666663333333333.69999999977633333333333..5555555555556*******54.444..5999999999998888888888885 PP

       MFS_1 271 ...lgr.......rrrlllallllllaalglallavtssavllllvlvl..iGfglgfv..fpsllalasdlappeeagtasglfntagslggalgp 353
                      +       ++rl+ +++++ ++  gl+++++ts + l++++ ++  + fg+g+v  + s+++++ d++  +  ++a+++ ++++s gga +p
  EPX74247.1 413 nrmD-AnggksipEWRLIGMMIAAPFIPTGLLIFGWTSFPRLIWIGPAFsgVPFGYGMVlfYFSANNYLIDVYQ-NFCASALAAKTMVRSGGGAAFP 507
                 5540.2666666799**********************9999999977776766677777776666666666663.8888888888899888888776 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.13
       MFS_1 122 aigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllp 173
                 a++  ++  s G +  pl+  +++     +++f++l+ v++ a+ + +++++
  EPX74247.1 491 ALAAKTMVRSGGGAAFPLFIDYMMNGMTRQWAFFLLGMVAVAAIPIPFIFYF 542
                 6666677778888888888888888888899999999999999775445544 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.3  28.1   2.1e-09   1.3e-05      50     438 ..     158     542 ..     115     546 .. 0.76

  Alignments for each domain:
  == domain 1  score: 24.3 bits;  conditional E-value: 2.1e-09
                 HHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHH CS
    Sugar_tr  50 livsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlait 148
                 l++s+++vG  +G l++++l++++GR+ ++l++ ++++i ++ +a+a+   ++  l+++R+++G +     +l+   +s i  ++ Rg  + ++  +  
  EPX74247.1 158 LSCSLMVVGFGVGPLIISPLSEMYGRRIVYLVTLAIYIILQIPCALAN---NIACLLICRFFAGCFGCSPLTLAGGVLSDIWETRQRGLAIAFFAAGPY 253
                 789*********************************************...*************9988889999********************99877 PP

                 HHHHHHHHHHHHHHTSS-TTHHHHHHHCCHHHHHHHHHHGGGS---HHHHHHTT-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH.....HTTHHH CS
    Sugar_tr 149 fGilvaaifglglnktsnadgwrillglqlvpallllilllflPESPrylvekgkeeeakevlaklrgeedadrelaeekdsleaeqeeekaswkells 247
                 +G  ++  +g  +   ++   +r+ ++++++   ++ i +l +PE+   +  +  + +a+++ ++  +  ++  + ++ + sl++ ++       +ll+
  EPX74247.1 254 AGPTIGPLVGGWVGVGTD--DFRWIFWVNMIYMFVMYITMLPIPET---YAPVLLRWRAQKIRKE--TGRQVFTAQEKQMLSLKEIVQ------VNLLR 339
                 777777766666644444..5999**********************...3333333344444444..222222233333333333322......34555 PP

                 HSH.....HHHHHHHHHHHHHHT.THHHHHHHTTTHHHHSS-THH.HHHHHHHHHHHHHHHHHHHHHHHHS-SHHHHHHH........HHHHHHHHHHH CS
    Sugar_tr 248 skt..vrqrlligvvlqifqqlt.Ginaimyysptifenlglsks.llvtiivgvvnfvatfvaiflvdrfGRRtllllG........aagmaicfvil 334
                  +t  ++ ++l+ + + i+  +   + +++ y+ ++ +  g+++      +i + v +++ ++  ++ +r  + ++   G        ++gm+i++ ++
  EPX74247.1 340 PITllMTEPILLSISCYIALIYAlLYGYFFAYPNVFVKGKGYNEGiTGLMFIPVLVGVAFALATTPFLERQYMNRMDANGgksipewrLIGMMIAAPFI 438
                 5566677888887776655543213379*****************644455666677777777778888888888888777777777799999998888 PP

                 H...HHHHTTSS...CHHHHHHHHHHHHHHHTTTTHHHHHHHHHHS....HTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHT-HHHHHHHHHHHH CS
    Sugar_tr 335 g.ivalllvakskaasivaivfialfialfalgwgpvpwvlvsElf....pqsvRskalaiavavnwlanflisllfpiiteaigggyvflvfaglavl 428
                   +  +++ ++      ++ ++ a+  + f+   g v++  ++  +     q++ ++ala  ++v      +  l++ ++++ ++  + f++ +++av+
  EPX74247.1 439 PtGLLIFGWTSF---PRLIWIGPAFSGVPFG--YGMVLFYFSANNYlidvYQNFCASALAAKTMVRSGGGAAFPLFIDYMMNGMTRQWAFFLLGMVAVA 532
                 643444444443...4444455554444444..33333333333321122688999999999999********************************** PP

                 HHHHHHHHS- CS
    Sugar_tr 429 fiifvfffvp 438
                 +i + f+f++
  EPX74247.1 533 AIPIPFIFYF 542
                 **99999985 PP

>> DUF3464  Photosynthesis affected mutant 68
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0   0.00053       3.2     101     127 ..     216     242 ..     186     247 .. 0.76
   2 ?    2.1   0.0     0.024   1.5e+02      34      95 ..     312     374 ..     304     379 .. 0.74
   3 !    4.0   0.1    0.0064        38      64      81 ..     458     475 ..     450     498 .. 0.74

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.00053
     DUF3464 101 slvlFglgvlGlsYGvlSasWdeereG 127
                  +++Fg + l l+ GvlS  W+ +++G
  EPX74247.1 216 FAGCFGCSPLTLAGGVLSDIWETRQRG 242
                 478********************9999 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.024
     DUF3464  34 kakeeekkdkeekeeaaiPevVskRmirRvalfsGiPlalGlatfvv.fylivskelvdlptw 95 
                 k++ ++  + +ek+  ++ e+V+  ++r ++l+   P++l ++  ++  y+++ +  +  p++
  EPX74247.1 312 KETGRQVFTAQEKQMLSLKEIVQVNLLRPITLLMTEPILLSISCYIAlIYALLYGYFFAYPNV 374
                 44555555667777778*************************987751566666666666665 PP

  == domain 3  score: 4.0 bits;  conditional E-value: 0.0064
     DUF3464  64 alfsGiPlalGlatfvvf 81 
                  +fsG+P   G+++f ++
  EPX74247.1 458 PAFSGVPFGYGMVLFYFS 475
                 579*********998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (556 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       490  (0.02733); expected 358.6 (0.02)
Passed bias filter:                      261  (0.0145574); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 3860.33
//
Query:       EPX74248.1  [L=117]
Description: hypothetical protein SOCG_05147 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       335  (0.0186848); expected 358.6 (0.02)
Passed bias filter:                      298  (0.0166211); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 904.25
//
Query:       EPX74249.1  [L=633]
Description: STE/STE7 protein kinase Wis1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.4e-59  199.5   0.0    8.1e-59  199.1   0.0    1.1  1  Pkinase         Protein kinase domain
    5.2e-37  127.5   0.0    7.1e-37  127.1   0.0    1.1  1  Pkinase_Tyr     Protein tyrosine kinase
    8.1e-05   22.1   0.0    0.00013   21.4   0.0    1.2  1  Kinase-like     Kinase-like
     0.0012   17.9   0.0     0.0012   17.9   0.0    2.0  2  Haspin_kinase   Haspin like kinase domain
     0.0095   15.0   0.0      0.017   14.2   0.0    1.3  1  Seadorna_VP7    Seadornavirus VP7
  ------ inclusion threshold ------
       0.07   11.9   0.0       0.07   11.9   0.0    1.5  2  Pkinase_fungal  Fungal protein kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  199.1   0.0   2.7e-62   8.1e-59       4     264 .]     349     605 ..     346     605 .. 0.92

  Alignments for each domain:
  == domain 1  score: 199.1 bits;  conditional E-value: 2.7e-62
                 EEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHHHHH CS
     Pkinase   4 leklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseeeakk 102
                 l +lG+G++G+Vyka+++ +g ++AvK+i+ + ++ + + ++++E+ il+k  +p+iv +y++f  + ++++++ey++ g++++l+   g+ +e  +++
  EPX74249.1 349 LAELGKGNYGVVYKALHRPSGVTMAVKEIRLSLEEATFN-QIIMELDILHKATSPYIVDFYGAFFVEGSVFICMEYMDVGSMDKLYI-GGITDEGVLSR 445
                 679*******************************99886.9********************************************97.68999****** PP

                 HHHHHHHHHHHHH.HTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHH.......TTSCBSHHHHHHHHHHHHHHHHHS CS
     Pkinase 103 iakqilegleylH.skgiiHrDlKpeNiLidekgelKitDFGlakelessskltsfvgtseYlAPEvl.......keneyskkvDvWslGvilyelltg 193
                 ia+ +l+gl+ l  +++iiHrD+Kp N+L++++g++K++DFG++ +l  s   ++ +g + Y+APE +       +  +y+ ++D+WslG++++e+  g
  EPX74249.1 446 IAYAVLQGLKTLKeEHNIIHRDVKPTNVLVNSSGQIKLCDFGVSGNLVASI-SKTNIGCQSYMAPERIrvggggnGVLSYTVQADIWSLGLTILEMAIG 543
                 *************7788********************************99.9999************998865444899******************* PP

                 S-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 194 kppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 + p++     +++++++ ql +i++      e  + +s +s+ea d+++++l+k+p+ R++ +el +hp++
  EPX74249.1 544 CYPYP----PDSYTSIFAQLSAICD-----GEPPKMPSCFSPEAHDFVNRCLRKNPSLRPGYQELSSHPWI 605
                 *****....4556778888655554.....3566788889******************************7 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.1   0.0   2.4e-40   7.1e-37       5     256 ..     350     600 ..     346     602 .. 0.91

  Alignments for each domain:
  == domain 1  score: 127.1 bits;  conditional E-value: 2.4e-40
                  EEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBH CS
  Pkinase_Tyr   5 kklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekekltl 102
                   +lG+G++G V+++  +     + v+ avK ++ + +e + ++++ e++i++k   p iv ++g+   e++++i +ey++ G+++k         ++ 
   EPX74249.1 350 AELGKGNYGVVYKALHR----PSGVTMAVKEIRLSLEEATFNQIIMELDILHKATSPYIVDFYGAFFVEGSVFICMEYMDVGSMDKLYIGG---ITDE 440
                  68************999....899************************************************************9866554...6777 PP

                  HHHHHHHHHHHHHHHHHHH.TTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE.......EEHHHHHHHHH CS
  Pkinase_Tyr 103 kdllsfalqvAkGmeyLes.kklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk.......ftsksDvWsfG 192
                    l ++a+ v +G++ L++ ++++Hrd+   NvL++++ ++k++DfG++ ++      + ++++  +  +mapE ++ +        +t+++D+Ws G
   EPX74249.1 441 GVLSRIAYAVLQGLKTLKEeHNIIHRDVKPTNVLVNSSGQIKLCDFGVSGNL----VASISKTNIGCQSYMAPERIRVGGggngvlsYTVQADIWSLG 534
                  78899************76167*****************************9....556667778899*********9988899999*********** PP

                  HHHHHHHTTSSGTTTTSHHHHHHHHH...HTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHH CS
  Pkinase_Tyr 193 vllwEiftlgespypglkneevlekl...kegkrlekpekcpeelyelmkkcweedpeeRptfselv 256
                   ++ E++  g  pyp  + ++++++l    +g+  ++p+  ++e ++++++c++++p+ Rp ++el 
   EPX74249.1 535 LTILEMAI-GCYPYPPDSYTSIFAQLsaiCDGEPPKMPSCFSPEAHDFVNRCLRKNPSLRPGYQELS 600
                  *****998.9999998887777665533389999****************************99986 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.0   4.3e-08   0.00013     163     250 ..     461     549 ..     444     559 .. 0.78

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 4.3e-08
  Kinase-like 163 kglvhgkftvdnllldekgglmlggftaLvragtkvvl.sevekgfaPpEllgsrggytrknktkmthkldaWqlGlviyriw..clklPl 250
                  + ++h +++++n+l +  g+++l +f+      ++    +  ++++  pE +   gg   +  + +t + d W lGl+i+ ++  c   P 
   EPX74249.1 461 HNIIHRDVKPTNVLVNSSGQIKLCDFGVSGNLVASISKtNIGCQSYMAPERIRVGGG--GNGVLSYTVQADIWSLGLTILEMAigCYPYPP 549
                  679***********************864444444433246679**99999888666..5689*****************98733555555 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -8.4   7.6         6   1.8e+04      31      32 ..      73      84 ..      17     141 .. 0.51
   2 !   17.9   0.0     4e-07    0.0012      61     254 ..     289     489 ..     264     501 .. 0.76

  Alignments for each domain:
  == domain 1  score: -8.4 bits;  conditional E-value: 6
  Haspin_kinase 31 f..........s 32
                              +
     EPX74249.1 73 NsvddnnahnvQ 84
                   022222222220 PP

  == domain 2  score: 17.9 bits;  conditional E-value: 4e-07
  Haspin_kinase  61 lrnsesllslnsqeevkdfdevilsqilelc.kikkilneadlasllndsekl.ssevyqtke...kdkevvlKviplevledvtis.kelsl..k 148
                    l+   sl +++s+++   f++++  +  +l  k k iln   ++ +  +s ++ +se+ ++ e    +  vv+K +     + vt+  ke++l  +
     EPX74249.1 289 LKIPPSLRQFASETPFSTFSDILDAKSGSLNfKNKAILNADGVNFSSGSSFRInMSEIIKLAElgkGNYGVVYKALH--RPSGVTMAvKEIRLslE 382
                    55666888888888888999988886666655777888888777666665554357777777766566778888654..46666666666655436 PP

  Haspin_kinase 149 elkslklvkgtypglllllqdkvlkek.pdfyseqqlflvlllkdkGt..dLeevklkswkqalsifwqivkiLyvaEtkfeFEHRdLhldniLvd 241
                    e    +++     ++l+ + + ++ +    f+ e+ +f+ ++  d G+   L    +++     +i + +++ L+   ++ +  HRd +  n+Lv+
     EPX74249.1 383 EATFNQIIMEL--DILHKATSPYIVDFyGAFFVEGSVFICMEYMDVGSmdKLYIGGITDEGVLSRIAYAVLQGLKTLKEEHNIIHRDVKPTNVLVN 476
                    66666666666..6777777777777667889999999999988888621344448888888999******************************* PP

  Haspin_kinase 242 knlnvtlidlkls 254
                    +++++ l+d+ +s
     EPX74249.1 477 SSGQIKLCDFGVS 489
                    *********9876 PP

>> Seadorna_VP7  Seadornavirus VP7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.0   5.8e-06     0.017     146     187 ..     449     486 ..     441     504 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 5.8e-06
  Seadorna_VP7 146 iivaglkdLmdfhsestnllhGDcnpenlmcDknGylklvDP 187
                    ++ glk L++ h    n++h D++p n++ ++ G++kl D 
    EPX74249.1 449 AVLQGLKTLKEEH----NIIHRDVKPTNVLVNSSGQIKLCDF 486
                   4667777777777....9*********************995 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.3   1.3         2   5.9e+03     257     257 ..      84      84 ..      36     139 .. 0.48
   2 ?   11.9   0.0   2.3e-05      0.07     315     382 ..     450     508 ..     438     532 .. 0.74

  Alignments for each domain:
  == domain 1  score: -4.3 bits;  conditional E-value: 2
  Pkinase_fungal 257 k 257
                     +
      EPX74249.1  84 Q 84 
                     1 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 2.3e-05
  Pkinase_fungal 315 aIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFma 382
                     +++g++ L ++ +i+HrD+   N+l++     ++ +  L D+ +  +l      s +++ +G   +ma
      EPX74249.1 450 VLQGLKTLKEEHNIIHRDVKPTNVLVN-----SSGQIKLCDFGVSGNLVA----SISKTNIGCQSYMA 508
                     67899*********************9.....445555666655555552....33345566666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (633 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       755  (0.0421105); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.70u 0.29s 00:00:00.99 Elapsed: 00:00:00.46
# Mc/sec: 4117.30
//
Query:       EPX74250.1  [L=298]
Description: ubiquitin carboxy terminal hydrolase Uch2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.8e-65  219.2   0.0    6.9e-65  218.7   0.0    1.2  1  Peptidase_C12  Ubiquitin carboxyl-terminal hydrolase, family 
    1.2e-12   47.5   0.9      3e-12   46.3   0.9    1.5  1  UCH_C          Ubiquitin carboxyl-terminal hydrolases


Domain annotation for each model (and alignments):
>> Peptidase_C12  Ubiquitin carboxyl-terminal hydrolase, family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  218.7   0.0   7.8e-69   6.9e-65       1     210 [.       3     203 ..       3     204 .. 0.88

  Alignments for each domain:
  == domain 1  score: 218.7 bits;  conditional E-value: 7.8e-69
                    ---EE--HHHHHHHHHHHT--S..EEEE--S.SHHHTTS-.--EEEEEEE.----------.---------..T...TS------STTGHHHHHHH CS
  Peptidase_C12   1 wlplEsdPevftelleklGvkgvqfeevyslddellaslp.vyglillfkyieeeeeeeerekeeeekdeeeeevsekvfFakQtiqnaCgtiAlL 95 
                    w+++Esd++vft+l+e+lGv+gv++ee+y+ld+e+l+++  +yg+i+lfk+ +++  + +     +e d+e   + +++fF +Q+i+naC+t+AlL
     EPX74250.1   3 WTTIESDAGVFTDLIENLGVSGVEVEELYTLDEETLRNISdIYGIIFLFKWKKPD-GKPD-----GELDYE---SIDRIFFGQQVINNACATQALL 89 
                    9******************************999****966**********9877.3332.....233333...2357****************** PP

                    HHHHH..STS--.-TTSHHHHHHHHHTTS-HHHHHHHHHT-HHHHHHHTTSC.......---SSTHHHHS--EEEEEEEEETTEEEEE-TTS.S-E CS
  Peptidase_C12  96 hvllNlekeaeeielgseLkkfkeftkelspeergealenseeireahnsfa.....segqteapeeeedvafHFiafvpvngklyeLDGlkegPi 186
                    +vllN +   eei+lg++L++f+eftk l+p+ +geal+ns++ir ahnsfa      +++t++++e++d  +HFia++++n++ yeLDGl+++Pi
     EPX74250.1  90 SVLLNHS---EEINLGPKLNEFREFTKLLPPDLKGEALGNSDDIRCAHNSFArsdpfVSDETKVATEDDD-VYHFIAYTNINNTFYELDGLQPAPI 181
                    *****55...688***************************************888884445666656677.8************************ PP

                    EEEE--T..TTHHHH.HHHHHHHT CS
  Peptidase_C12 187 dlgeveeeeedledavrkviqeri 210
                    ++g+++  +e++++ + ++iq+ri
     EPX74250.1 182 NHGSCT--KEEFSKRAVTTIQSRI 203
                    *****5..58**99999****997 PP

>> UCH_C  Ubiquitin carboxyl-terminal hydrolases
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.3   0.9   3.3e-16     3e-12       8      42 ..     241     275 ..     240     277 .. 0.95

  Alignments for each domain:
  == domain 1  score: 46.3 bits;  conditional E-value: 3.3e-16
       UCH_C   8 LeeEeeKrerwkeENaRRrHNYlPFIvelLkaLae 42 
                 +++E++Kr++wk+EN++RrHN+l++Ive+ k +a+
  EPX74250.1 241 IAAENDKRAKWKRENQLRRHNFLGLIVEMSKLMAK 275
                 799****************************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (298 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       595  (0.0331865); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 2105.72
//
Query:       EPX74251.1  [L=161]
Description: SCF ubiquitin ligase complex subunit Skp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-28   97.2   0.5    1.4e-27   95.6   0.2    1.9  2  Skp1      Skp1 family, dimerisation domain
    1.6e-26   92.2   0.4    3.9e-26   91.0   0.2    1.8  2  Skp1_POZ  Skp1 family, tetramerisation domain
  ------ inclusion threshold ------
       0.09   11.8   0.0        0.1   11.6   0.0    1.1  1  DUF2090   Uncharacterized protein conserved in bacteria (DUF2


Domain annotation for each model (and alignments):
>> Skp1  Skp1 family, dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.33     2e+03      30      42 ..      62      76 ..      60      80 .. 0.66
   2 !   95.6   0.2   2.3e-31   1.4e-27       1      48 []     111     158 ..     111     158 .. 0.98

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.33
        Skp1 30 enD.ft.pEEeeeir 42
                +nD ++  +Ee  ir
  EPX74251.1 62 KNDlYSnTDEESDIR 76
                688777555665687 PP

  == domain 2  score: 95.6 bits;  conditional E-value: 2.3e-31
        Skp1   1 kgLldltcktvAdmikgktpeeiReiFnIenDftpEEeeeirkEneWa 48 
                 k+Lld +cktvA+mi+gk+pe+iR++FnI+nDftpEEee+irkEneWa
  EPX74251.1 111 KPLLDTGCKTVANMIRGKSPEDIRKTFNIPNDFTPEEEEQIRKENEWA 158
                 78*********************************************8 PP

>> Skp1_POZ  Skp1 family, tetramerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.0   0.2   6.6e-30   3.9e-26       2      63 .]       3      63 ..       2      63 .. 0.97
   2 ?   -3.2   0.0       1.6   9.8e+03      24      32 ..     119     127 ..     118     133 .. 0.76

  Alignments for each domain:
  == domain 1  score: 91.0 bits;  conditional E-value: 6.6e-30
                EEEEEETTSCEEEEEHHHHTTSHHHHHHHHCTCCCGTTCEEETTS-HHHHHHHHHHHHHCHH CS
    Skp1_POZ  2 sivLqSsDgesfeveeavakkSktikhmiedlgdddkpriplpnvtskiLekvieYckhhkk 63
                +i+L+SsD+e+f v++ va+kS +i++m+ed+g+ +  +iplpnv+s++L+kv+e+c+hhk+
  EPX74251.1  3 KIKLISSDNEEFTVDRPVAEKSMLINNMLEDVGELNV-PIPLPNVSSNVLRKVLEWCEHHKN 63
                8**********************************99.7*********************96 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.6
                 HHHHHHHHC CS
    Skp1_POZ  24 ktikhmied 32 
                 kt+++mi +
  EPX74251.1 119 KTVANMIRG 127
                 789999965 PP

>> DUF2090  Uncharacterized protein conserved in bacteria (DUF2090)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   1.8e-05       0.1     125     188 ..      45     106 ..      19     126 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 1.8e-05
     DUF2090 125 elgrsvgselveWpkehvvkclvfyHPddeaelraeqeaklkelyeaarksghelllEvippkd 188
                 + +++v  +++eW ++h  k  ++   d+e+++r ++ + + e  +   + ++e+l E+i++ +
  EPX74251.1  45 NVSSNVLRKVLEWCEHH--KNDLYSNTDEESDIRLKKSTDIDEWDKKFMSVDQEMLFEIILASN 106
                 467899999****9999..8899999**********************************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       666  (0.0371465); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.47
# Mc/sec: 1033.27
//
Query:       EPX74252.1  [L=255]
Description: kinetochore protein Mis12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.2e-33  114.3   0.3    4.2e-33  114.3   0.3    1.8  2  Mis12      Mis12 protein
  ------ inclusion threshold ------
       0.02   14.6   0.6       0.03   14.0   0.6    1.2  1  CPP1-like  Protein CHAPERONE-LIKE PROTEIN OF POR1-like


Domain annotation for each model (and alignments):
>> Mis12  Mis12 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.3   0.3   4.7e-37   4.2e-33       1     134 [.       1     131 [.       1     132 [. 0.91
   2 ?   -1.8   0.1      0.33     3e+03      90     116 ..     157     176 ..     139     210 .. 0.61

  Alignments for each domain:
  == domain 1  score: 114.3 bits;  conditional E-value: 4.7e-37
                 HHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHHH........TTSTHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTS---HHHHCCCH CS
       Mis12   1 lltehlgftPqsliddiinavndllyravdavekvLdkkleedeeeekaaeesteeieeGtakletlleasvDknfdkfElyvlrniltipeelvewvr 99 
                 +l++ ++ftP+s+idd+in+ n+lly++v++v+++++        + +++++s +eieeG++k+e l+e+ vD+ +d+fE+yvlrni++ p+el+ ++r
  EPX74252.1   1 MLVQLFEFTPLSFIDDVINITNQLLYKTVNGVDRAFS--------SLSSTKKSPQEIEEGLHKFEILFESVVDRYYDRFEIYVLRNIFHYPPELKGYLR 91 
                 5899******************************994........56677789********************************************** PP

                 CCHHCCTTS......HHHHHHHHHHHHHHHHHHHHHHHHHH CS
       Mis12 100 Lphdeglel......eerldeeieelrrkleaelklnkaLk 134
                 L+ +  ++       +++ld+eie+  + l+++lk+++ L+
  EPX74252.1  92 LEGQ-TADYtvtlekDASLDQEIEDAAHILTEKLKTRHSLR 131
                 ***9.4444456654556*******************9996 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.33
                 --HHHHCCCHCCHHCCTTSHHHHHHHH CS
       Mis12  90 ipeelvewvrLphdegleleerldeei 116
                 ip+  ++ + Lp+  ++ l     +++
  EPX74252.1 157 IPK--QQRITLPETTDFLL-----DQL 176
                 555..44566666644444.....222 PP

>> CPP1-like  Protein CHAPERONE-LIKE PROTEIN OF POR1-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.6   3.3e-06      0.03      18     113 ..     102     188 ..      97     195 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 3.3e-06
   CPP1-like  18 eyagdekaveaiEaAYDaiLmdrLreRqegkikvperirfaekkeeesppsas.asklkkspawvkklqesldtPssedlliraavflvlavltlva 113
                 ++++d    ++iE A   iL ++L++R + +     ++r+ e+++++ +++ +  s l+++p+     q++++ P+++d l+  +v l  ++ ++ +
  EPX74252.1 102 TLEKDASLDQEIEDA-AHILTEKLKTRHSLR----MQLRKSEERRQQLKKQLEtISLLSNIPK-----QQRITLPETTDFLLDQLVGLQTSLHSVTQ 188
                 578899999****99.68**********999....6666666677677776665888899994.....69***********9999988777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1400  (0.0780858); expected 358.6 (0.02)
Passed bias filter:                      626  (0.0349155); expected 358.6 (0.02)
Passed Vit filter:                        70  (0.00390429); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.28s 00:00:00.78 Elapsed: 00:00:00.46
# Mc/sec: 1675.18
//
Query:       EPX74253.1  [L=85]
Description: Swi5 protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.7e-28   98.5   1.4    1.9e-28   98.4   1.4    1.0  1  Swi5           Swi5
     0.0011   19.4   1.2     0.0011   19.4   1.2    1.5  2  KELK           KELK-motif containing domain of MRCK Ser/Thr p
      0.006   16.7   1.5     0.0072   16.5   1.5    1.2  1  Tropomyosin_1  Tropomyosin like
     0.0094   16.3   2.8      0.011   16.1   2.8    1.2  1  YlqD           YlqD protein
  ------ inclusion threshold ------
      0.011   15.6   0.8      0.015   15.2   0.8    1.4  1  Nas2_N         Nas2 N_terminal domain
      0.016   14.7   0.5      0.034   13.7   0.3    1.6  2  KNOX2          KNOX2 domain
      0.025   14.8   1.0       0.03   14.5   1.0    1.2  1  Spc24          Spc24 subunit of Ndc80
      0.053   13.1   0.0      0.062   12.9   0.0    1.1  1  HSM3_C         DNA mismatch repair protein HSM3, C terminal d
       0.25   11.8   4.4       0.37   11.2   4.4    1.2  1  DUF2681        Protein of unknown function (DUF2681)
       0.25   11.6   3.3       0.36   11.1   3.2    1.4  1  T3SS_needle_F  Type III secretion needle MxiH, YscF, SsaG, Ep
       0.68   10.7  10.1       0.98   10.2   5.8    2.6  2  M              M protein repeat
       0.69   11.0   4.3          1   10.5   4.3    1.3  1  DUF5320        Family of unknown function (DUF5320)


Domain annotation for each model (and alignments):
>> Swi5  Swi5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.4   1.4   1.3e-31   1.9e-28       1      79 [.       6      83 ..       6      84 .. 0.97

  Alignments for each domain:
  == domain 1  score: 98.4 bits;  conditional E-value: 1.3e-31
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTSHCGGGHHHCT-XT CS
        Swi5  1 leaeikeleeqleelekelaelkeelkekkdpeetvkrhIklLheYNEiKDvgqgLigliAeargvrikevfeefGvee 79
                lea+++ le+q ++lek+l+e+ ++lk+++ ++ tv+rhI+lLh+YNEi+Dv++g+ig++Ae+++++ +e+f++fGv+ 
  EPX74253.1  6 LEARVQLLEQQKQQLEKQLQEAMSKLKNPN-AKYTVQRHIDLLHTYNEIRDVALGMIGKVAEQEKCTSVELFQRFGVDS 83
                57899***********************98.**********************************************85 PP

>> KELK  KELK-motif containing domain of MRCK Ser/Thr protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   1.2   7.4e-07    0.0011       4      34 ..       5      35 ..       4      58 .. 0.89
   2 ?   -3.0   0.0       6.8     1e+04      28      31 ..      66      69 ..      60      75 .. 0.50

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 7.4e-07
        KELK  4 eLekqlrllkqEkeelqkelaeaqErlksqk 34
                +Le +++ll+q k++l+k+l+ea+ +lk+ +
  EPX74253.1  5 QLEARVQLLEQQKQQLEKQLQEAMSKLKNPN 35
                699*************************855 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 6.8
        KELK 28 Erlk 31
                E+ k
  EPX74253.1 66 EQEK 69
                3333 PP

>> Tropomyosin_1  Tropomyosin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   1.5   4.8e-06    0.0072      77     109 ..       5      37 ..       1      55 [. 0.80

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 4.8e-06
  Tropomyosin_1  77 altrkiqlLEeeleesdkkLkettekLretdvk 109
                    +l+ ++qlLE++  + +k+L+e++ kL++ ++k
     EPX74253.1   5 QLEARVQLLEQQKQQLEKQLQEAMSKLKNPNAK 37 
                    678899999999999999999999999887655 PP

>> YlqD  YlqD protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   2.8   7.2e-06     0.011      24      57 ..       5      42 ..       2      76 .. 0.77

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 7.2e-06
        YlqD 24 qlqaqieqldkelqqLefqakrlikeikkqsaq....q 57
                ql+a+++ l+++ qqLe q++++++++k+ +a+    +
  EPX74253.1  5 QLEARVQLLEQQKQQLEKQLQEAMSKLKNPNAKytvqR 42
                899************************88776654441 PP

>> Nas2_N  Nas2 N_terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.8     1e-05     0.015       2      30 ..      11      39 ..      10      54 .. 0.90

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1e-05
      Nas2_N  2 keLekkkdeiekeieelsevLesqnvgmd 30
                + Le++k+++ek+++e+++ L+++n++++
  EPX74253.1 11 QLLEQQKQQLEKQLQEAMSKLKNPNAKYT 39
                5699******************9998775 PP

>> KNOX2  KNOX2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.3   2.2e-05     0.034      13      39 ..       7      33 ..       6      37 .. 0.87
   2 ?   -2.7   0.0       2.8   4.2e+03      16      24 ..      44      52 ..      41      52 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 2.2e-05
       KNOX2 13 eaYcdvLvkYkeeLtrpveEAteFlre 39
                ea +++L + k++L++ ++EA++ l++
  EPX74253.1  7 EARVQLLEQQKQQLEKQLQEAMSKLKN 33
                666899****************98875 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 2.8
       KNOX2 16 cdvLvkYke 24
                +d+L+ Y e
  EPX74253.1 44 IDLLHTYNE 52
                578888865 PP

>> Spc24  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   1.0     2e-05      0.03      15      66 ..       5      82 ..       2      85 .] 0.69

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 2e-05
       Spc24 15 dleselesleselaelkeeleeleeesee....keser.........................vedetllklklYrsLGie 66
                +le+ ++ le+++++l+++l+e  ++ ++        +                         +e+e+   ++l++ +G++
  EPX74253.1  5 QLEARVQLLEQQKQQLEKQLQEAMSKLKNpnakY---TvqrhidllhtyneirdvalgmigkvAEQEKCTSVELFQRFGVD 82
                6899999999999999999999999999964430...23344455555555566666777774447777777777777765 PP

>> HSM3_C  DNA mismatch repair protein HSM3, C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   4.1e-05     0.062      24      65 ..      31      72 ..      10      78 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 4.1e-05
      HSM3_C 24 lslvnPkylvkyhktlvkelalvspsklgilrnliadeecfn 65
                l+  n ky v+ h +l++++  +    lg++  ++ +e+c +
  EPX74253.1 31 LKNPNAKYTVQRHIDLLHTYNEIRDVALGMIGKVAEQEKCTS 72
                3444668*******************************9965 PP

>> DUF2681  Protein of unknown function (DUF2681)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   4.4   0.00025      0.37      34      86 ..       5      55 ..       2      55 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00025
     DUF2681 34 klqaekqqlkvekavaeaevknakvkqkneentrrlsrdsvddqLhqhgylRd 86
                +l+a  q l+++k++ e++ + a  k kn ++   ++r+  +d Lh  + +Rd
  EPX74253.1  5 QLEARVQLLEQQKQQLEKQLQEAMSKLKNPNAKYTVQRH--IDLLHTYNEIRD 55
                578889999999999999999999999999999999999..899999999887 PP

>> T3SS_needle_F  Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   3.2   0.00024      0.36       5      43 ..      10      44 ..       6      61 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00024
                   HHHHHCCTHHHHHHHHHHHHHHHHSTTXHHHHHHHHHHH CS
  T3SS_needle_F  5 asalsqkvskaekelqdalealkadpsdPaaLakvQfkl 43
                   ++ l+q+ +++ek+lq+a+++l    ++P+a  +vQ+ +
     EPX74253.1 10 VQLLEQQKQQLEKQLQEAMSKL----KNPNAKYTVQRHI 44
                   57799*****************....7777777777665 PP

>> M  M protein repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   3.4   0.00067         1       5      21 .]       5      21 ..       2      21 .. 0.94
   2 ?   10.2   5.8   0.00065      0.98       1      19 [.      15      33 ..      15      39 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00067
           M  5 eLEaelqeLeeelqaLe 21
                +LEa++q Le+++q+Le
  EPX74253.1  5 QLEARVQLLEQQKQQLE 21
                8***************8 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00065
           M  1 eakkeLEaelqeLeeelqa 19
                ++k++LE++lqe+ ++l++
  EPX74253.1 15 QQKQQLEKQLQEAMSKLKN 33
                79**********9998886 PP

>> DUF5320  Family of unknown function (DUF5320)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   4.3   0.00068         1      68      98 ..       3      33 ..       1      34 [. 0.87

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00068
     DUF5320 68 easkeeekelLeeqaeaLeeeleaikkrlke 98
                +++ e++ +lLe+q++ Le++l++ +++lk+
  EPX74253.1  3 KPQLEARVQLLEQQKQQLEKQLQEAMSKLKN 33
                567788999***************9999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2445  (0.136371); expected 358.6 (0.02)
Passed bias filter:                     1232  (0.0687155); expected 358.6 (0.02)
Passed Vit filter:                       187  (0.01043); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.43u 0.28s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 640.16
//
Query:       EPX74254.1  [L=236]
Description: translation initiation factor eIF4E 4F complex subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.4e-54  181.8   0.3    8.9e-54  181.6   0.3    1.1  1  IF4E      Eukaryotic initiation factor 4E


Domain annotation for each model (and alignments):
>> IF4E  Eukaryotic initiation factor 4E
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  181.6   0.3     5e-58   8.9e-54       1     159 []      58     216 ..      58     216 .. 0.96

  Alignments for each domain:
  == domain 1  score: 181.6 bits;  conditional E-value: 5e-58
                 EEEEEEEEEEE-TTT--SS-SGGG-EEEEEEEEHHHHHHHHHHS--GGGB-SSEEEEEEETT--SSTTSHHHHS-EEEEEEE--.---HHHHHHHHHHH CS
        IF4E   1 pLkskWtlwfdsksksksenyeeslkkvatfstveeFwslynnlkkpsklkvksdyhlFkkgikPmWEdpankkGGkwvirlkk.kekldrlWeellla 98 
                 p++++Wtlwf  k++++  ++ + lk++++f+tveeFw++++ + k+s l+ ksdy++F kgi+P WEdp+n +GGkw ++ k+  ++ld+lW +++la
  EPX74254.1  58 PFQHEWTLWF-LKPPTQGLEWGDLLKEIISFKTVEEFWGIFKTIAKASMLPAKSDYSFFLKGIRPEWEDPNNMNGGKWAFQSKHkGSNLDELWLYMVLA 155
                 789*******.666669****************************************************************9884566*********** PP

                 HHTT-SS--.-SEEEEEEEE-SSEEEEEEEES-TT-HHHHHHHHHHHHHT--------EEE CS
        IF4E  99 ligeqleeeedeicGvvvsvRkkedrisiWtrdasdeekvekigeklkevlelpeekkley 159
                 ++ge+l++ ++e++Gvv+++R+ ++ri++Wtr+++d+e++ekig ++ke+l+++e++++ey
  EPX74254.1 156 ALGETLDPTGKEVTGVVCNMRRGFYRIAVWTRNCNDREVLEKIGLRFKEILGVSEKETIEY 216
                 **********************************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (236 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       298  (0.0166211); expected 358.6 (0.02)
Passed bias filter:                      284  (0.0158403); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 1648.07
//
Query:       EPX74255.1  [L=259]
Description: NifU-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-30  104.6   0.0      4e-30  103.7   0.0    1.5  1  Nfu_N     Scaffold protein Nfu/NifU N terminal
    2.7e-26   91.5   0.0    4.3e-26   90.8   0.0    1.3  1  NifU      NifU-like domain
  ------ inclusion threshold ------
      0.044   13.9   0.1        0.1   12.7   0.1    1.6  1  YojJ      Bacterial membrane-spanning protein N-terminus


Domain annotation for each model (and alignments):
>> Nfu_N  Scaffold protein Nfu/NifU N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.7   0.0   6.7e-34     4e-30       1      87 []      45     133 ..      45     133 .. 0.95

  Alignments for each domain:
  == domain 1  score: 103.7 bits;  conditional E-value: 6.7e-34
       Nfu_N   1 iqteeTPNpnalkFlpgkellpe.gstaefksaeea.asplakkLfkiegVksVfigsdFitvtkeddvdWeelkpevlevikeflesg 87 
                 i+ eeTPN+na+kFlpg ++lp+  +t e+ +++e  +spla+kLf+i+gVks+f+g dFitv+k+++ +W++lkpev+++i+e+l++g
  EPX74255.1  45 IRSEETPNENAIKFLPGLDILPPtIGTLEYMRTQEYnNSPLAEKLFEIPGVKSIFFGRDFITVSKDESQSWTQLKPEVFSTIMEHLSNG 133
                 7789******************97779*****99866*************************************************976 PP

>> NifU  NifU-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.8   0.0   7.2e-30   4.3e-26       1      66 [.     161     228 ..     161     229 .. 0.98

  Alignments for each domain:
  == domain 1  score: 90.8 bits;  conditional E-value: 7.2e-30
                 HHHHHHH.HGGG--GG--EEEEEEEETT..EEEEEEESGGGG-....THHHHHHHHHHHHH-TT--EE CS
        NifU   1 ieevleeeirPaLasdGGdielvdvdeg..vVkvrlqGaCsgCpsstvtlkegiekaLkeevpevkeV 66 
                 i+e+le+ irP +++dGGd+e+ ++de+   V ++l+GaC++C+ss+vtlk+gi+++L +++pev eV
  EPX74255.1 161 IKELLETSIRPSIQEDGGDVEFRGFDEEtgMVSLKLRGACRSCSSSAVTLKSGIQQMLNHYIPEVREV 228
                 89*************************999************************************99 PP

>> YojJ  Bacterial membrane-spanning protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   1.7e-05       0.1       7      51 ..     207     251 ..     201     256 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1.7e-05
        YojJ   7 eeelkeklkeeLeqiekeleevlkaldeedeClLcelesirekfa 51 
                 +  lk+ ++++L++ + e+ ev + ld e+e   +e+e+  + + 
  EPX74255.1 207 AVTLKSGIQQMLNHYIPEVREVNQVLDPEEEVAISEFEKFEKRIH 251
                 5579**********************************9888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       640  (0.0356964); expected 358.6 (0.02)
Passed bias filter:                      497  (0.0277205); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1975.34
//
Query:       EPX74256.1  [L=512]
Description: folylpolyglutamate synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     0.0002   21.4   0.7     0.0067   16.4   0.1    3.5  3  Mur_ligase_M  Mur ligase middle domain
  ------ inclusion threshold ------
      0.031   14.0   0.0         13    5.4   0.0    3.0  3  peroxidase    Peroxidase


Domain annotation for each model (and alignments):
>> Mur_ligase_M  Mur ligase middle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.1   7.5e-07    0.0067       1     108 [.      87     248 ..      87     279 .. 0.75
   2 ?   -0.2   0.0     0.095   8.5e+02     162     190 ..     274     302 ..     258     304 .. 0.71
   3 ?   -1.1   0.0      0.18   1.6e+03      96     118 ..     367     391 ..     359     434 .. 0.79

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 7.5e-07
                   EESSS-HHHHHHHHHHHHHCTEEEEETTC.................................................SS-THHHHHHHHHHHHH.. CS
  Mur_ligase_M   1 vTGtnGKTTtteliaailekagkvigtvg.................................................ttnneiglpktlaemek.. 46 
                   v+Gt+GK +t  ++ +il+k  k++  +                                                  t +++  + ++l+ +    
    EPX74256.1  87 VAGTKGKGSTCAFTSSILSKIQKKYPDIApkrigmytsphlrsvceriqldgkpvskelftkyffqmwdrleataseaTNPEKPMYFRFLTLL-Awh 182
                   89****************9995555554455666777888*********************************99997333333333333222.234 PP

                   ....TT-SEEEEE--HCHHHC.TTTCCHCBESEEEE---TSTTHHHH.SSHHHHHHHHHHHHHTSETT CS
  Mur_ligase_M  47 ....keaeyavlEvsshglge.krlegllkpdvavitnispdHldfh.gtlenyaeaKaelferlkee 108
                       +++++a++Ev+  g  +   l  + kp v ++t+++ dH   + +++ ++a  Ka ++++    
    EPX74256.1 183 vffsEGVDAAIIEVGIGGEYDsTNL--IEKPIVTAVTSLGLDHTALLgKSISEIAWQKAGIYKESATA 248
                   55558************54444444..459***************8879*************877643 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.095
                   EEEETTEEEEEEESSCSCHHHHHHHHHHH CS
  Mur_ligase_M 162 llevkggeleieipllGkhnvyNalaaia 190
                   +++ ++      i+l G h++ Na++a+ 
    EPX74256.1 274 IIKAPFFLKPEMIGLSGAHQLGNAALAME 302
                   454455544566899**********9986 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 0.18
                   HHHHHHHHTSETTCEEEEE...TTSC CS
  Mur_ligase_M  96 eaKaelferlkeegiavin...addp 118
                   ++K++lf++ +++ +++ n   +ddp
    EPX74256.1 367 ASKRQLFKEAEKR-VLIFNqqsRDDP 391
                   6899999999965.888884444444 PP

>> peroxidase  Peroxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0     0.038   3.4e+02     116     160 ..      57     100 ..      32     165 .. 0.63
   2 ?    4.0   0.0    0.0039        35       5      38 ..     161     195 ..     153     211 .. 0.76
   3 ?    5.4   0.0    0.0014        13     136     154 ..     282     300 ..     249     360 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.038
                 -.-TS-HHHHHHHHHHHT--HHHHHHHHGGGGC-EESHH...... CS
  peroxidase 116 PdptasvdelrdkfarkgltdeelvaLsGaHtiGkahcssfsrly 160
                 P +++s++++++  +r g ++ +l  L   H+ G++ + s   ++
  EPX74256.1  57 P-NDDSMTQMKEYLNRIGYQTSDLNRLNVIHVAGTKGKGSTCAFT 100
                 6.57999********************999999998765444444 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.0039
                 HHHCCCC.TTTHCHHHHHHHHHHHTTSSTTSCHHH CS
  peroxidase   5 vkaalka.drdmgpsllrlafhdcfvgGcdgsvll 38 
                 +++a ++ ++ +   l  la+h  f +G d++++ 
  EPX74256.1 161 ASEATNPeKPMYFRFLTLLAWHVFFSEGVDAAIIE 195
                 4555555455666677889*************985 PP

  == domain 3  score: 5.4 bits;  conditional E-value: 0.0014
                 HHHHHHHHGGGGC-EESHH CS
  peroxidase 136 deelvaLsGaHtiGkahcs 154
                 ++e++ LsGaH +G+a  +
  EPX74256.1 282 KPEMIGLSGAHQLGNAALA 300
                 68**************954 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (512 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       676  (0.0377043); expected 358.6 (0.02)
Passed bias filter:                      631  (0.0351944); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.39
# Mc/sec: 3982.82
//
Query:       EPX74257.1  [L=791]
Description: cleavage factor two Cft2/polyadenylation factor CPSF-73 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.3e-54  182.6   0.1    1.1e-53  181.6   0.1    1.6  1  Lactamase_B_6  Metallo-beta-lactamase superfamily domain
    8.6e-33  113.9   0.1    2.5e-32  112.4   0.1    1.8  1  CPSF100_C      Cleavage and polyadenylation factor 2 C-termin
    3.9e-16   59.3   0.0      1e-15   58.0   0.0    1.8  1  Beta-Casp      Beta-Casp domain
    7.5e-11   41.8   0.0    1.6e-10   40.8   0.0    1.5  1  RMMBL          Zn-dependent metallo-hydrolase RNA specificity
    0.00024   20.7   0.0    0.00064   19.3   0.0    1.6  2  Lactamase_B_2  Beta-lactamase superfamily domain
     0.0015   18.5   0.1     0.0041   17.0   0.1    1.7  1  Lactamase_B_3  Beta-lactamase superfamily domain
     0.0051   16.8   0.1     0.0099   15.9   0.1    1.4  1  Lactamase_B    Metallo-beta-lactamase superfamily


Domain annotation for each model (and alignments):
>> Lactamase_B_6  Metallo-beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  181.6   0.1   4.2e-57   1.1e-53       2     193 .]      18     191 ..      17     191 .. 0.92

  Alignments for each domain:
  == domain 1  score: 181.6 bits;  conditional E-value: 4.2e-57
  Lactamase_B_6   2 LeldnvkiLlDvGwdeskvslesalkelekviptvdliLLshatlehlGayallyakfksklllnipvyatlpvvkLGrvslldlyaskgllgped 97 
                    +eld+++i +D+G+d+s +       e   v ++ dliLLsh++l+hlG++++ y+++    ++n+++yatlpv+++Gr+++ld+++s+ +     
     EPX74257.1  18 IELDGIHIYIDPGSDDS-L-------EHPPVPEQPDLILLSHSDLSHLGGLVYAYHRY---DWKNAHIYATLPVINMGRMTMLDAIKSNFV----- 97 
                    79*************97.3.......34567889****************97777665...479***********************9955..... PP

  Lactamase_B_6  98 seeleledideafdkiktlkYsQklelkskldgltitaynaGhtlGGtiWkiskesekivYavdwnhakeshLngaalldssgkvleqllrptali 193
                     + +++e ++++fd+i++l+YsQ+++l +++ g+++taynaGh+lGGt+W++ kese+i+Yavdwnh+k++hLng+al  ++g+ le+l rp++li
     EPX74257.1  98 -DDITKEQVNQVFDSIIALRYSQPTSLLGTCCGVSVTAYNAGHSLGGTLWSLIKESESILYAVDWNHSKDKHLNGTALY-TNGHILEALNRPNTLI 191
                    .46899**********************************************************************976.69***********998 PP

>> CPSF100_C  Cleavage and polyadenylation factor 2 C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.4   0.1   9.9e-36   2.5e-32       2     170 .]     645     788 ..     644     788 .. 0.85

  Alignments for each domain:
  == domain 1  score: 112.4 bits;  conditional E-value: 9.9e-36
   CPSF100_C   2 kLsdsLvksLkwqkveglevatvtgeleieeeaeeaeeeekeeeeeeeeeeeeeeeaskkqklaeksekeaseeeseekkeslptldvlpankasvrs. 99 
                 kLsd+L+++L w kv ++ev+++ +++e            k  ++e++++e +ee+a              ++++s+++++ lp+l+++  ++  +r  
  EPX74257.1 645 KLSDDLIRNLIWTKVGNCEVSHMLAKIE------------KPLDSETQDSEVNEEDA--------------KRNDSDKEADHLPVLNPVTLRSDLARAp 717
                 9**************************9............23333333333333222..............23345667889999*9999888888888 PP

   CPSF100_C 100 aaqplfvGdlrLadLkkallssgikAEFrgeGtLvidgaVaVrKsakGrieiegvvletfyeVrkaiYegl 170
                  a pl vG+ +La+L+kall++ i+AE++geG+L+++g+VaVrK + G+i ieg ++++f+eVrk+iY++l
  EPX74257.1 718 RAAPLLVGNTKLAELRKALLDQRISAELKGEGVLLCGGVVAVRKLSGGKITIEGGLSNQFFEVRKMIYKML 788
                 9*******************************************************************987 PP

>> Beta-Casp  Beta-Casp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.0   0.0   3.9e-19     1e-15       1     102 [.     235     352 ..     235     361 .. 0.85

  Alignments for each domain:
  == domain 1  score: 58.0 bits;  conditional E-value: 3.9e-19
                 HHHHHHHH..HCTT..TTS-S-EEEEE-HHHHHHHHHGGGGGGE-SHH.....HHH..H...HH....................HS-SSEEEEES-TTS CS
   Beta-Casp   1 aqellylLeelwkekkledlklpiyldsplaskatevYkeyaeveaks.lewmesk..ke.eln....................sskgpkvilassgml 75 
                 ++el+++L+ +w++ ++  + +pi+++sp+++k++++        a+s +ewm ++  ++  ++                      +gpkvila+s  l
  EPX74257.1 235 VLELCCFLDSHWSSTQPPLP-FPIFFLSPTSTKTIDY--------ARSmIEWMGDNivRDfGIDesllefrnihtitdysqlssIGPGPKVILATSLTL 324
                 68**********99774234.9***************........9********9986544333889****************96679*********** PP

                 SSSHHHHHHHH.HTTSTTSEEEESS--- CS
   Beta-Casp  76 egGrsrellkk.lledprntvilvgyqa 102
                 + G+s+++l + + ++++ ++++++++ 
  EPX74257.1 325 DCGFSQQVLLNfMSQNSNDLILFTQKSR 352
                 ***********66678999999998775 PP

>> RMMBL  Zn-dependent metallo-hydrolase RNA specificity domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.8   0.0   6.1e-14   1.6e-10       2      62 .]     565     627 ..     564     627 .. 0.91

  Alignments for each domain:
  == domain 1  score: 40.8 bits;  conditional E-value: 6.1e-14
       RMMBL   2 ipvkarieeidfSgHadknellelirklkprnvilvHGeeeatsalarllk..eeegidvfiP 62 
                 i++ +++++id +g +d ++l+ +i++++pr+++l+H   e+ ++++r+++  + + +dv++P
  EPX74257.1 565 IRISCQVQFIDIEGLHDGRSLKTIIPQVNPRKLVLIHATDEEREDMKRTCSalSAFTKDVYLP 627
                 799***********************************************6556666888776 PP

>> Lactamase_B_2  Beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   2.5e-07   0.00064       3     165 ..      25     195 ..      24     209 .. 0.82
   2 ?   -2.9   0.0       1.6   4.1e+03      38     109 ..     695     779 ..     694     783 .. 0.56

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 2.5e-07
                    EEES--TTHHHHHTCGGS--SSS--..SEEEEE-SS--HHHHGGGGCCCC..C--EE.EEEEEEHHHHH........HCCTTCGHHHCHTT...TT CS
  Lactamase_B_2   3 iLiDagpdlrqqalralqPvelrdelppidaVllthaHyDHlaglltlre..lrpkk.lplyapkgvla........vleanfvylaleee...pa 84 
                    i iD+g d     +  + Pv     +++ d++ll+h++  Hl gl    +      k +++ya++ v+          +++nfv + ++e+    +
     EPX74257.1  25 IYIDPGSD----DSLEHPPV-----PEQPDLILLSHSDLSHLGGLVYAYHryD--WKnAHIYATLPVINmgrmtmldAIKSNFVDDITKEQvnqVF 109
                    78999999....23344443.....5699***************999999532..33488999966666555555558999988888888888888 PP

                    EEEEEE-TTSEEEE..CSTTEEEEEEEE-EE--C..TCCE-TTTSEEEEEECTTEEEEEESS-S---.HHHHHHHCT-SEEEEE-S CS
  Lactamase_B_2  85 vnvheldwgesfel..gdggleitatparhksgr..rldrnagdtlGlriegggkrvyyigDtgyip.eeigerlggadlllldit 165
                     ++  l   ++++l  +  g+++ta  a h+ g       ++++ + +++++++ +  ++ +t+ ++ ++i e l+ ++ l+ d++
     EPX74257.1 110 DSIIALRYSQPTSLlgTCCGVSVTAYNAGHSLGGtlWSLIKESESILYAVDWNHSKDKHLNGTALYTnGHILEALNRPNTLITDAN 195
                    9999999********9888999******9999996655567779999*****************7777*************99986 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.6
                    S--HHHH..GGGGCCCC...C--EEEEEEEEHHHHHHCCTTCGHHHCHTT..........TTEEEEEE-TTSEEEECSTTEEEEEEE CS
  Lactamase_B_2  38 haHyDHl..aglltlre...lrpkklplyapkgvlavleanfvylaleee..........pavnvheldwgesfelgdggleitatp 109
                    ++++DHl   +  tlr    ++p+ +pl++    la+l++ +       e          + v+v++l  g++++++ ggl+ ++++
     EPX74257.1 695 DKEADHLpvLNPVTLRSdlaRAPRAAPLLVGNTKLAELRKALLDQRISAElkgegvllcgGVVAVRKLS-GGKITIE-GGLSNQFFE 779
                    677888866666777777766666677776666566565554444333334444566655555666655.5556664.455555555 PP

>> Lactamase_B_3  Beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.1   1.6e-06    0.0041      11      49 ..      17      56 ..      13      66 .. 0.91

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 1.6e-06
  Lactamase_B_3 11 lletagarilvDPfka.nlgyeppaeeaDlvlisqaledH 49
                    +e +g  i++DP++  +l+  p +e++Dl+l+s++   H
     EPX74257.1 17 HIELDGIHIYIDPGSDdSLEHPPVPEQPDLILLSHSDLSH 56
                   6899**********98899999999**********99888 PP

>> Lactamase_B  Metallo-beta-lactamase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.1   3.9e-06    0.0099      42      88 ..      41      87 ..      19     130 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 3.9e-06
                 GGGEEEEE-SBSSHHHHTTGGGCTTHHCCEETCCEHHHHCCHCHHHH CS
  Lactamase_B 42 pkdvdavilTHlHlDHiGglgglveatdvpvgavaeeapalfmeead 88
                 p+++d ++l+H++l H Ggl +  +++d + ++ ++++p+ +m  + 
   EPX74257.1 41 PEQPDLILLSHSDLSHLGGLVYAYHRYDWKNAHIYATLPVINMGRMT 87
                 789*************************************9998874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (791 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       632  (0.0352502); expected 358.6 (0.02)
Passed bias filter:                      514  (0.0286686); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.65u 0.25s 00:00:00.90 Elapsed: 00:00:00.42
# Mc/sec: 5690.67
//
Query:       EPX74258.1  [L=331]
Description: peptide N-glycanase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.8e-14   52.5   1.2    1.2e-13   51.5   1.2    1.5  1  Transglut_core  Transglutaminase-like superfamily
    4.5e-11   42.6   0.1    8.6e-11   41.7   0.1    1.4  1  Rad4            Rad4 transglutaminase-like domain
    0.00044   20.1   3.2     0.0011   18.9   3.2    1.6  1  PhnA_Zn_Ribbon  PhnA Zinc-Ribbon
     0.0033   17.3   2.2      0.013   15.5   2.2    2.0  1  Zn_Tnp_IS1595   Transposase zinc-ribbon domain


Domain annotation for each model (and alignments):
>> Transglut_core  Transglutaminase-like superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.5   1.2   2.6e-17   1.2e-13      24     111 ..     137     209 ..     116     210 .. 0.85

  Alignments for each domain:
  == domain 1  score: 51.5 bits;  conditional E-value: 2.6e-17
  Transglut_core  24 wvrknveysaprrtpgsrdaeavletgkGncedfaslfvallRalGipaRvvtgylsgeeekeqsvasedaHawvevyl.egygWvplD 111
                     + ++ ++  +++r p++++++ +l ++kG+c ++a++f+ l+RalG  aR+v +  +              H+w+evy  ++++Wv++D
      EPX74258.1 137 YQCNTCS--HQQRFPRYNKVRPLLHSRKGRCGEWACCFTFLCRALGSRARWVWNAED--------------HVWTEVYSfKQNRWVHVD 209
                     4444444..5599***************************************88877..............*******98********9 PP

>> Rad4  Rad4 transglutaminase-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.7   0.1   1.9e-14   8.6e-11      37     146 ..     192     299 ..     188     300 .. 0.78

  Alignments for each domain:
  == domain 1  score: 41.7 bits;  conditional E-value: 1.9e-14
                 SEEEEEEETTTTEEEEEESSSS-EESS--TTS--..TGGGS----EEEEE-TTS-EEE-HHHH-T.TCCCCHGGGSGGGSHHHHHHHHHHHHHH--S-- CS
        Rad4  37 vyWvEvfspekkkwisvdplvgstiekkeilepl..aekakqvlsYVvAfdsdgsakDVTrRYlsdysnsktkklrvekskeekkWfesvlrplekrnk 133
                 ++W+Ev+s ++ +w++vd +       ++ ++pl   +   + +sY ++f s  s++DV++RY+++  ++   + r +     +  +e v+r l+++ +
  EPX74258.1 192 HVWTEVYSFKQNRWVHVDSCE------ESFDQPLiyEQGWGKKMSYCIGF-SIDSVRDVSSRYIRN-PENGNPRNRCP-----EYVIEHVIRSLNEEFR 277
                 79******************6......5888898867777777*******.999***********9.67777777888.....6666777776666665 PP

                 -H...........HHHHHHHHH CS
        Rad4 134 ert.........evdalEdael 146
                 +           + d++E++el
  EPX74258.1 278 SPLtaddrskllDEDKREKEEL 299
                 5444555666677777777776 PP

>> PhnA_Zn_Ribbon  PhnA Zinc-Ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   3.2   2.4e-07    0.0011       3      28 ..     105     145 ..      97     145 .. 0.97

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 2.4e-07
  PhnA_Zn_Ribbon   3 pkCplCaSeytY...............edgallvCpeCahE 28 
                     pkC+ C+S++ +                + +++ C +C+h+
      EPX74258.1 105 PKCESCQSDTHLigasrpnaeesfqgcNNVEVYQCNTCSHQ 145
                     9***************************************9 PP

>> Zn_Tnp_IS1595  Transposase zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   2.2   2.8e-06     0.013      14      46 .]     100     145 ..      97     145 .. 0.96

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 2.8e-06
  Zn_Tnp_IS1595  14 rWpngfvCPhCgsr.kayrikt............rglfqCkeCrkq 46 
                     W n + C  C+s+ +++  ++             +++qC+ C++q
     EPX74258.1 100 SWVNSPKCESCQSDtHLIGASRpnaeesfqgcnnVEVYQCNTCSHQ 145
                    599*****************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       802  (0.044732); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2412.76
//
Query:       EPX74259.1  [L=550]
Description: lysine methyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-05   25.9   0.1    2.2e-05   24.9   0.1    1.5  1  SET       SET domain


Domain annotation for each model (and alignments):
>> SET  SET domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.1   1.2e-09   2.2e-05       6     169 .]      38     238 ..      36     238 .. 0.73

  Alignments for each domain:
  == domain 1  score: 24.9 bits;  conditional E-value: 1.2e-09
                 ESSXBXTTXEE....EEEE...ECCEECHHHHHHHHHH........................HTEEEEEXGGXX.GGSXHHHHHHHTTSSHHHHHHHHH CS
                 xxxxxxxxxxx....xxxx...xxxxxxxxxxxxxxxx........................xxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxx RF
         SET   6 AtedIpkgefi....ceyp...eeiiltkdeadksele........................aylfslpeapkn.laftkelakasastllqklakdqk 72 
                 A+ dI+++e++    +ey+   e +i++ +  + ++++                        ay++ lp+++ +  +f++e+ +  + t+++ + +d  
  EPX74259.1  38 AKTDIEADELLiscpFEYAityETAIISLQSINAEFKSlspeivmytflalerlkasdskwaAYIEYLPKSFDTpTYFNDEDKQFLKATNIEFALQDRL 136
                 899********44333666999999999999999998899*****999999999999999998888888554443334344444444444444444444 PP

                 HHHHHHHHHTHHHHHHHXTTTSXXXHCCCCC....HCCCHEEEETEEEEEECCC............GTTGGGCEEXS.SSSEEEEEEEETTSSEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxx............xxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxx RF
         SET  73 qaekedtdaalkasskaesdlnaskpeagaf....saiagysidaralksgnga............gplarflNHsC.dpNcnltvqnvlrgprvavfA 154
                 ++   ++++ lk  s  e+          +f    + +a  ++ +r++ s+                pl++ lNH   +p + + +++  + + + +++
  EPX74259.1 137 HNWRHAYEDVLKLGSFSEN----------QFtldlFIWAATVFTSRCFSSTLINssiskedatpilLPLIDSLNHKAmQPIL-WKTDV-RDTMSIQLVS 223
                 4444444444444332222..........22345689999999999999999999999999999***********9856666.44444.79******** PP

                 SSXBXTTEEEEEXTT CS
                 xxxxxxxxxxxxxxx RF
         SET 155 trdIkkGeEltidYg 169
                 +   + G++++++Yg
  EPX74259.1 224 QNTTSRGQQIFNNYG 238
                 **************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (550 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       437  (0.0243739); expected 358.6 (0.02)
Passed bias filter:                      300  (0.0167327); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.28s 00:00:00.81 Elapsed: 00:00:00.44
# Mc/sec: 3714.02
//
Query:       EPX74260.1  [L=400]
Description: GTPase binding protein Rid1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.5e-18   65.9   3.7    6.5e-18   65.0   3.4    1.6  1  Drf_GBD         Diaphanous GTPase-binding Domain
  ------ inclusion threshold ------
       0.32   11.2   3.4       0.75   10.1   0.7    2.4  2  Imm44           Immunity protein 44


Domain annotation for each model (and alignments):
>> Drf_GBD  Diaphanous GTPase-binding Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.0   3.4   7.3e-22   6.5e-18      10     182 ..      48     227 ..      41     232 .. 0.89

  Alignments for each domain:
  == domain 1  score: 65.0 bits;  conditional E-value: 7.3e-22
     Drf_GBD  10 dklFeelleelnlpeekreallalpiekKwqlvvqdkkkkakkeeklsksksksneeespesyvkklkddslke...kqlesLrVaLrtqplsWvkrFi 105
                  + Fe+l++   l++e+ + ll+l+ + K ++  + ++++++k   + + k+k+ + + p++++ ++ ++s+++   +++++L+  Lr +++ Wv+ Fi
  EPX74260.1  48 PQCFENLIKAQVLSSEASRGLLSLNDNIKLEILNSLNERNKHKRSRILSWKKKKTSYSEPIDFISYIVNTSIDSmdeTIIHKLALLLRKEQILWVTCFI 146
                 588***********************************99999999999**********************999999********************** PP

     Drf_GBD 106 eleGlvaLlnvLskinekkaeeeedlkkey.eiikClKalmNnkvGldavlahksvikllaqsldserl....ktrklvlel 182
                 +++G  ++l++ +ki + + +e + +++ + + + ClKa++   +Gl+  l+ ++ ++ l+q l s+++     tr+ ++++
  EPX74260.1 147 HYGGFGVILSMIEKISRIEWRE-NLHDILLdQFLLCLKAMCTVHFGLECLLRSSYHVQQLVQLLFSKKQpsdfATREVIIQI 227
                 ****************999888.55555552799******************************998762222566666665 PP

>> Imm44  Immunity protein 44
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.7   8.3e-05      0.75      48     101 ..      75     129 ..      69     140 .. 0.82
   2 ?    0.7   0.1     0.066   5.9e+02      90     117 ..     216     243 ..     206     264 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 8.3e-05
       Imm44  48 ivvyilkkielkeftkerklykkkskeadlrlridyeaflanaDiatre.Livkn 101
                 i + il+ ++ ++ +k  ++   k+k+  +  +id+ ++  n+ i++ +  i+++
  EPX74260.1  75 IKLEILNSLNERNKHKRSRILSWKKKKTSYSEPIDFISYIVNTSIDSMDeTIIHK 129
                 55678999999999**999***************************985344443 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.066
       Imm44  90 aDiatreLivkniiavirklgekkvsdf 117
                 +D+atre+i++ i   ++   ++++   
  EPX74260.1 216 SDFATREVIIQIINLYLKAHTNREIGAK 243
                 6999999999877666655555544443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (400 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       844  (0.0470746); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2781.93
//
Query:       EPX74261.1  [L=308]
Description: ING family Png2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      9e-19   67.9   0.4    1.8e-18   67.0   0.0    1.7  2  ING         Inhibitor of growth proteins N-terminal histone-b
    5.6e-05   22.9   8.0    0.00013   21.8   8.0    1.6  1  PHD         PHD-finger
    0.00042   20.5   1.0    0.00083   19.6   0.2    1.9  2  zf-HC5HC2H  PHD-like zinc-binding domain
  ------ inclusion threshold ------
       0.11   12.6   0.1        1.4    9.1   0.1    2.3  1  DegQ        DegQ (SacQ) family
          1    8.0   8.7        1.5    7.4   8.7    1.2  1  MAP65_ASE1  Microtubule associated protein (MAP65/ASE1 family


Domain annotation for each model (and alignments):
>> ING  Inhibitor of growth proteins N-terminal histone-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.0   0.0     5e-22   1.8e-18       2     100 ..      12     110 ..      11     111 .. 0.98
   2 ?   -2.3   0.4       1.9   6.8e+03      16      52 ..     145     180 ..     142     205 .. 0.60

  Alignments for each domain:
  == domain 1  score: 67.0 bits;  conditional E-value: 5e-22
                 HHHHHTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS..S-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTXX CS
         ING   2 LedyldsvenLPlelqrnltelreiDakvqellkeidskiekflkngslqknekeeelsriqeelkeaqelldeKiqlaqqaldlvdkhlrrLdqdlek 100
                 L+d++d++ ++P+ ++ n+t l+eiDa+ +el+ ++ + i++ l++g+  +n+ ++++ ++++++ke+++++d Ki+la++a+  ++++++rLd+d+e 
  EPX74261.1  12 LNDFTDAIVSIPESVCSNFTYLKEIDARSRELKTKVTEGIDSILSDGKRGSNPINNRCLQLENDIKEMIPFSDSKICLATEAMGNINQCIDRLDADFEY 110
                 9************************************************************************************************96 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 1.9
                 HHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHTS..S-H CS
         ING  16 lqrnltelreiDakvqellkei.dskiekflkngslqk 52 
                 ++rn  + +  D + q++  ++  ++ie+ +  ++++ 
  EPX74261.1 145 TRRNQPQQHHTDHQHQTHHTSYpGQHIEERS--SAHHG 180
                 5566666666677777777666656666655..22333 PP

>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   8.0   3.6e-08   0.00013       1      51 [.     256     302 ..     256     303 .. 0.84

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 3.6e-08
                 SBTTTTSTTSTTSCEEEET..TTSC.EEETTTSSSTHSHHSHHSSTBSSTTTHT CS
         PHD   1 rCavCkkksdeeeelvqCd..gCkr.wfHqkClkppleseekpegewlCekCke 51 
                 +C  C++     ++++ Cd  +Ckr wfH  C+++ +     p+g w+C++C+e
  EPX74261.1 256 YC-YCQQ--VSYGQMIGCDneNCKReWFHLPCVGLVEP----PKGIWYCTECRE 302
                 68.9999..679******8446*855**********66....7778******97 PP

>> zf-HC5HC2H  PHD-like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       4.2   1.5e+04      36      52 ..      85     100 ..      72     102 .. 0.57
   2 !   19.6   0.2   2.3e-07   0.00083      31      66 ..     249     285 ..     230     289 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 4.2
  zf-HC5HC2H  36 klkCylCkkkvGaciqC 52 
                 ++ C   +  +G + qC
  EPX74261.1  85 SKICLATEA-MGNINQC 100
                 444544443.4777777 PP

  == domain 2  score: 19.6 bits;  conditional E-value: 2.3e-07
  zf-HC5HC2H  31 kkerkklkCylCkkkvGaciqCskkkCkk.afHvtCa 66 
                  +e ++l Cy+ + ++G +i+C++++Ck+  fH+ C 
  EPX74261.1 249 LNEGEQLYCYCQQVSYGQMIGCDNENCKReWFHLPCV 285
                 466788899866777************86369****6 PP

>> DegQ  DegQ (SacQ) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.1   0.00039       1.4      16      43 ..      72     111 ..      69     114 .. 0.66

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00039
        DegQ  16 LEneirE...........TtdSLrniNKSiDQyD.KYeYl 43 
                 LEn+i+E            t+ + niN+ iD +D  +eY+
  EPX74261.1  72 LENDIKEmipfsdskiclATEAMGNINQCIDRLDaDFEYV 111
                 666666643333333333588899*********9447886 PP

>> MAP65_ASE1  Microtubule associated protein (MAP65/ASE1 family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   8.7   0.00043       1.5     411     513 ..     135     246 ..     130     260 .. 0.74

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.00043
                 HHHHHH...HHHHHHHHHHHHHHHHHHHHHHHCXXXXXXXXXXXXXX.........X.XXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  MAP65_ASE1 411 qweeleekyqererqksarklkkasqteeeilkgskmrtpskrrvta.........p.kTPsklksmskvsssssslkktpsnskslsankntalstan 499
                 +++++e k ++r+ q ++ + + + qt+++   g+     s+++            + +TPsk++++ + ++sss+l++t+ n   + ++ + +  t +
  EPX74261.1 135 NNQRIEGKRETRRNQPQQHHTDHQHQTHHTSYPGQHIEERSSAHH-GndhndshhaIyNTPSKRRKTTAQRKSSSPLHRTKPNVVTVVERRPGRRGTRQ 232
                 678899999999999999999999999966666666533333222.236677666536*********************99988777777776666666 PP

                 XXXXXXXXXXXXXX CS
  MAP65_ASE1 500 erkrklpsanvisk 513
                   + + +++n++++
  EPX74261.1 233 TTDDPSTKPNILEP 246
                 66666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (308 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1102  (0.0614647); expected 358.6 (0.02)
Passed bias filter:                      499  (0.027832); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 2125.91
//
Query:       EPX74262.1  [L=248]
Description: translation termination factor Rrf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.4e-23   81.7   9.0    5.4e-23   81.7   9.0    2.1  2  RRF        Ribosome recycling factor
     0.0056   16.8   0.1        1.3    9.3   0.1    2.6  2  RRM_DME    RRM in Demeter
  ------ inclusion threshold ------
      0.041   14.1   7.1      0.067   13.4   2.1    2.4  2  DUF4047    Domain of unknown function (DUF4047)
      0.085   12.8   0.2      0.085   12.8   0.2    2.1  2  DUF3437    Domain of unknown function (DUF3437)
        4.2    7.8   8.8       0.55   10.6   1.8    2.3  2  YlqD       YlqD protein


Domain annotation for each model (and alignments):
>> RRF  Ribosome recycling factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   2.9     0.014        51     117     152 ..      47      80 ..       2      89 .. 0.67
   2 !   81.7   9.0   1.5e-26   5.4e-23      16     161 ..      91     245 ..      82     246 .. 0.92

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.014
                 HHHHHHHHHC...S-HHHHHHHHHHHHHHHHHHHHHHHH CS
         RRF 117 nkklkklekk...iseDdvkkaekeiqkltdkyikeide 152
                  +k+     k   + +D +kk+e e+ ++++k  +  +e
  EPX74262.1  47 SDKI-----KdseVYSDVLKKMESEMSQVHKKLEAGFKE 80 
                 2223.....123366788888888888888876665555 PP

  == domain 2  score: 81.7 bits;  conditional E-value: 1.5e-26
                 GGGTTSEEEETTEEEE.......GGGTEEEEESSTTEEEEEESSCCHHHHHHHHHHHSCC-SEEE.EESSEEEEE--SSSHHHHHHHHHHHHHHHHHHH CS
         RRF  16 slldnikVeyygkktp.......LnqlAqvsvkeartllitpfdkslvkaiekaIlksdlglnpq.qdgevlrvpipplTeErrkelvkeakkaaekak 106
                 + l++++V y g++ +       L+++A+ + k+a++l+i+p+++s++k++ k++ +s l ++ + +d++++ v+ ++ T+E+r+ l+ke+++ a+k k
  EPX74262.1  91 NQLEKLSV-YIGSSKKnsnegqlLREVASLTKKSAQQLIIHPYEESYMKHVLKSLDESSLPIKASkTDSSTIMVVPQKTTQESRQRLAKELENHAKKSK 188
                 67999999.88885555677788*****************************************94588899999999********************* PP

                 HHHHHHHHHHHHHHHHHHHC..S-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         RRF 107 vairniRrdankklkklekk..iseDdvkkaekeiqkltdkyikeidellkakekel 161
                 +++  iR+d++k++ k +k+   ++Dd  +ae+++q + +k ++ +d +l++  k++
  EPX74262.1 189 DTVSVIRNDVKKAIAKYKKDrtWTTDDCYNAENHMQVIYKKSVSTLDTILSNVLKKV 245
                 *******************668888************************99887776 PP

>> RRM_DME  RRM in Demeter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   0.1   0.00036       1.3      60      94 ..       5      39 ..       2      46 .. 0.84
   2 !    5.1   0.0    0.0069        25      44      77 ..      89     122 ..      66     145 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00036
     RRM_DME 60 asifkglsteeiqecfwkgfvcvrgfdrktraPkp 94
                ++  ++ + +++ ++fwk+  cvr f+ + r  k+
  EPX74262.1  5 TTFSRASQWQKLSSTFWKQPTCVRNFHVNDRLWKE 39
                56678888999****************99997765 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.0069
     RRM_DME  44 liwnlerrivylGssvasifkglsteeiqecfwk 77 
                 + ++le+ +vy+Gss +    g+  +e+++  +k
  EPX74262.1  89 VFNQLEKLSVYIGSSKKNSNEGQLLREVASLTKK 122
                 56789**********9999999888888776555 PP

>> DUF4047  Domain of unknown function (DUF4047)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.2     0.032   1.2e+02      63     101 ..      31      74 ..      12      91 .. 0.64
   2 ?   13.4   2.1   1.9e-05     0.067      32     117 ..     119     207 ..     112     211 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.032
     DUF4047  63 eqalsvwkqgr.ekikaerealqkvy....teieepynqvqeel 101
                 + +  +wk+++  k+ +++    +vy    +++e    qv  +l
  EPX74262.1  31 HVNDRLWKEKKsKKVSSDKIKDSEVYsdvlKKMESEMSQVHKKL 74 
                 55567898876256777776655666111144555555555554 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 1.9e-05
     DUF4047  32 lveqakqhkelilheyeemksklkvdsveeieqalsvwkqgreki.....kaerealqkvyteieepynqvqeelkvnksesskqvlsyvn 117
                 l +++   ++li h yee  +k   +s++e    ++  k +   i     k+ +e+ q++ +e+e++ +++++ + v +++ +k +++y +
  EPX74262.1 119 LTKKS--AQQLIIHPYEESYMKHVLKSLDESSLPIKASKTDSSTImvvpqKTTQESRQRLAKELENHAKKSKDTVSVIRNDVKKAIAKYKK 207
                 44444..4579*******************999999999988887323333578*********************************9965 PP

>> DUF3437  Domain of unknown function (DUF3437)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   1.0       1.5   5.4e+03      57      57 ..      23      23 ..       4      58 .. 0.53
   2 ?   12.8   0.2   2.4e-05     0.085      24      67 ..     174     216 ..     156     234 .. 0.72

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 1.5
     DUF3437 57 t 57
                +
  EPX74262.1 23 Q 23
                2 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 2.4e-05
     DUF3437  24 kwlpevleeLaraardpa.pirktvkktlseFkrthqDtWeedkk 67 
                 + l + le+ a++++d    ir+ vkk+++++k+ +  tW++d  
  EPX74262.1 174 QRLAKELENHAKKSKDTVsVIRNDVKKAIAKYKKDR--TWTTDDC 216
                 55667777788888888878***************9..7976654 PP

>> YlqD  YlqD protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.7      0.14   4.9e+02      27      57 ..      58      92 ..      37     132 .. 0.62
   2 ?   10.6   1.8   0.00015      0.55       8      57 ..     163     218 ..     159     245 .. 0.79

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.14
        YlqD 27 aqieqldkelqqLefqakrlikeikkqsaq....q 57
                + ++++++e++q++ +++   ke++   +q    q
  EPX74262.1 58 DVLKKMESEMSQVHKKLEAGFKELALSPNQgvfnQ 92
                44566666666666666666666655444444443 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00015
        YlqD   8 tVKaivTeklKeelqqqlqaqieqldkelqqLefqakrlikeikkqsaq......q 57 
                 +V ++ T++++++l+++l+++ ++ +  ++ ++ + k++i++ kk  +       +
  EPX74262.1 163 VVPQKTTQESRQRLAKELENHAKKSKDTVSVIRNDVKKAIAKYKKDRTWttddcyN 218
                 578999*************************************9966545555541 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2621  (0.146188); expected 358.6 (0.02)
Passed bias filter:                      653  (0.0364214); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.52u 0.31s 00:00:00.83 Elapsed: 00:00:00.47
# Mc/sec: 1570.91
//
Query:       EPX74263.1  [L=68]
Description: copper chaperone Atx1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.1e-10   39.9   0.5    4.8e-10   39.7   0.5    1.1  1  HMA              Heavy-metal-associated domain
  ------ inclusion threshold ------
      0.016   15.3   0.0      0.018   15.2   0.0    1.1  1  Tox-PL-2         Papain fold toxin 2
      0.092   13.0   0.0       0.22   11.8   0.0    1.6  2  Antimicrobial_7  Scorpion antimicrobial peptide


Domain annotation for each model (and alignments):
>> HMA  Heavy-metal-associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.7   0.5     8e-14   4.8e-10       2      62 .]       5      60 ..       4      60 .. 0.95

  Alignments for each domain:
  == domain 1  score: 39.7 bits;  conditional E-value: 8e-14
         HMA  2 vrvsgmhCagCaakvekvLselpgVesvkvdlatktvtVegdaestklrkiieaiekagyk 62
                ++v  m+C+gC++++ +vL +l gV++ +++l++++v V++d +     +++++i+k+g++
  EPX74263.1  5 FNV-VMTCDGCKNAIDRVLNRL-GVDEKEISLEAQEVHVTTDKPY---DTVLQTIKKTGKE 60
                667.5*****************.*********************9...99*********96 PP

>> Tox-PL-2  Papain fold toxin 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.0     3e-06     0.018      15      58 ..       8      51 ..       2      62 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 3e-06
    Tox-PL-2 15 lleCveCAaalekyLkeqgisGkrlklktksaedaasfilserl 58
                ++ C+ C +a+ + L++ g+  k+++l++++ + +++  ++  l
  EPX74263.1  8 VMTCDGCKNAIDRVLNRLGVDEKEISLEAQEVHVTTDKPYDTVL 51
                478**************************998877776666655 PP

>> Antimicrobial_7  Scorpion antimicrobial peptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.97   5.8e+03      14      38 ..      21      24 ..      12      29 .. 0.52
   2 ?   11.8   0.0   3.7e-05      0.22       3      20 ..      50      67 ..      49      68 .] 0.93

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.97
  Antimicrobial_7 14 vwnSepvkqLKnkalNAAKNfVAeK 38
                     v+                     ++
       EPX74263.1 21 VL---------------------NR 24
                     33.....................44 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 3.7e-05
  Antimicrobial_7  3 vwDwIKstAkkvwnSepv 20
                     v+ +IK+t k+v++ ++v
       EPX74263.1 50 VLQTIKKTGKEVLSGKTV 67
                     899*************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       748  (0.0417201); expected 358.6 (0.02)
Passed bias filter:                      512  (0.0285571); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.35u 0.25s 00:00:00.60 Elapsed: 00:00:00.40
# Mc/sec: 514.85
//
Query:       EPX74264.1  [L=1426]
Description: cleavage factor one Cft1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-90  303.4   0.0      7e-89  298.3   0.0    2.6  2  CPSF_A    CPSF A subunit region
    1.6e-34  119.4   0.1    2.6e-34  118.7   0.1    1.3  1  MMS1_N    Mono-functional DNA-alkylating methyl methanesulfon


Domain annotation for each model (and alignments):
>> CPSF_A  CPSF A subunit region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0     0.011        97      66     117 ..      75     124 ..      34     187 .. 0.73
   2 !  298.3   0.0   7.8e-93     7e-89       3     321 ..    1061    1391 ..    1059    1392 .. 0.97

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.011
                 EEEEEEEE-SS--EEEEEEEEEEEES----EEEETTEEEEE-SSEEEEEEE- CS
      CPSF_A  66 ilvfeiievpetnrkLklvhkeevkgavtalaefqGrllvgvgqkvrvydlg 117
                  ++ + +  ++t++ L+lv + +v g+vtal+ ++G+   g+   v++ d+ 
  EPX74264.1  75 MHLIRTH--EHTSYVLRLVSQFQVFGTVTALSILKGKGNKGCDLLVMLTDYA 124
                 4444444..589999****************999998655555555555554 PP

  == domain 2  score: 298.3 bits;  conditional E-value: 7.8e-93
                  EEEEE-T..TT-EEEEE--TTEEEEEEEE--B-SSTTT---B--EEEEEEE---SSS--E.EEEEEEEEEE-......SS--EEEEEEEEEEEES-- CS
      CPSF_A    3 siklvdpiskeeidsleLeenEavlsvksvelessettkekkellvVGtafnlgedpaarsGrilvfeiiev......petnrkLklvhkeevkgav 93  
                  s+ l++p ++++ids+ + + E  lsv  v+le+settk +k++++VGt++++ged+a r G  ++feii+v      pet++kLkl+++ee+kg+v
  EPX74264.1 1061 SLDLISPLTWTVIDSYGFLPYEIPLSVSVVNLEVSETTKLRKPYVAVGTSITKGEDIAVR-GATYLFEIIDVvpqpgrPETRHKLKLITREEIKGTV 1156
                  789*********************************************************.************************************ PP

                  --EEEETTEEEEE-SSEEEEEEE-TTS-EEEEEEEE-SS-EEEEEEETTEEEEEESSS-EEEEEE-SSS--EEEEEEESS---EEEEEEE--SSS.E CS
      CPSF_A   94 talaefqGrllvgvgqkvrvydlgedktLlrkafldtqlyvvslkvlgnriivgDlmkSvtfveydeenyklilfardtqkrwvtaaeflvdged.t 189 
                  + ++e+ G+ll g+gqk++v+ l+++++L+++af+d + y+v++k l+n++++gD+++ v+fv+++ee+y+++lfa+   +++vtaa+flv+ge+ +
  EPX74264.1 1157 AVVCEVDGYLLSGQGQKIIVRALEDEDHLVGVAFIDLGSYTVTAKCLRNLLLFGDIRQNVSFVGFSEEPYRMTLFAKGQDALSVTAADFLVQGENlY 1253
                  ************************************************************************************************* PP

                  EEEEETTSEEEEEE--TTSGGGTTTT.EEEEEEEEE-SS----E...EEEE.SSS--S.........-EEEEEE-TTS-EEEEEE.--HHHHHHHHH CS
      CPSF_A  190 vlvaDkfgnlfvlrydpeasessdgdprleeraefhlgeivtslrkgslvpgeaesss.........spqllyatldGsigllvPliseeeyrrlqa 277 
                  ++vaD +g + +l ydpe++es +g+ rl  r +fh+g+i+t +   ++vp++++s +         +++++++ +dG++ ++ P +se+ yrrl+ 
  EPX74264.1 1254 FVVADTEGDMRLLAYDPENPESHSGE-RLVARGDFHIGHIITAM---KIVPKKKKSRQddydydtgnDFSCIMVNADGGLQMVSP-VSERVYRRLNI 1345
                  **************************.*****************...****777765689*************************.*********** PP

                  HHHHHHHHS--SSS--HHHHS---..----....---EEHHHHHHHH CS
      CPSF_A  278 LqqqLrkelkhlgGldhrafRsyyspksee...vkgviDgdllerfl 321 
                  +q+ L++ ++++gGl++r+ R ++ + s+    +++v+Dg l+erf+
  EPX74264.1 1346 IQNYLANRVDSVGGLNPRSHRLISIT-SNLsnaAHRVLDGTLIERFT 1391
                  ***********************996.444567*************7 PP

>> MMS1_N  Mono-functional DNA-alkylating methyl methanesulfonate N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.7   0.1   2.9e-38   2.6e-34       1     479 [.     115     697 ..     115     709 .. 0.79

  Alignments for each domain:
  == domain 1  score: 118.7 bits;  conditional E-value: 2.9e-38
      MMS1_N   1 DlLvvgsdsgelvflsynpeknqfet..vhshetlgksgsrrsqpGqylavDPkgraiavsayekvflvyslkk..............keilnr..... 78 
                 DlLv  +d  ++++l+++ +++++ t   h +e + ++  + +++   l+vDP + ++ +  + +++ ++++ k              k+i n+     
  EPX74264.1 115 DLLVMLTDYAKISILEWDMKTQSLVTtsLHYYEAVKPTMPSTNKTPTQLIVDPDSNCCLLRFHTDMMAIIPFPKiedlemeeaavddsKNIWNSitpyk 213
                 89********************88772246699*****************************************9987666655555544444477776 PP

      MMS1_N  79 ealll.ssplearksegvilsmvFldpgykeednpiialleqdrrg..........kteltlyewdlglnlvrkisktsepkknldsganlLiplpkp. 165
                  +  l ss le  ++   il++ Fl+    e   p++a+l++ ++           ++   l ++dl ++++ +i++   + +nl+     L+p+p p 
  EPX74264.1 214 PSFVLdSSQLE--STIARILDVKFLYGYR-E---PTLAILYSPQQTttvtlpilkdNVCFSLVTLDLDQRASAVITT---I-QNLPYDIFQLVPIPMPl 302
                 55555566666..77788*******9777.4...*******766667789999976677777888888877777554...3.358888899******85 PP

      MMS1_N 166 gg.vlVcgetiitykdildqedirkk..........swarPrrekatn.........fv..awekldsfffllatedGdLylleiekdedsgkvvtsis 242
                 gg +lV g++ i ++  +                    + P++  ++n          v  +++k+ + f+ll    G+  +l +++d   gk+v++++
  EPX74264.1 303 GGaLLVGGNELIYVDSAGRT-----VgigvntfyskCTNFPLQD-QSNfnvelegtvAVplVNSKIGNPFVLLILTSGQFLYLDFSMD---GKTVKGLT 392
                 66566666666666555443.....2233446666533466665.55556666664322667777777777777779********774...36799999 PP

      MMS1_N 243 lkyf........dtvsvasalvilksgfLfvasefGdgqlyqieargedd............................................knlel 289
                 l+++        +   v +al i +++++f++s+  d+ l+  +  ++                                               ++++
  EPX74264.1 393 LRNLdldinedfLRAGVTTALPI-EENMIFLGSQVTDSYLVHWNRHSSVSkntednendelysnndaemeemldiyetndrndlagkvtfengpLRMSI 490
                 99966666666566666666666.5667*************99998765589999***************************************999** PP

      MMS1_N 290 iqtldNlaPilDfkvvkes.....dlasegqdqiytcsGagkrgsLrelRsGieveelavseepgspitgvWtlklssede..............yddy 369
                  + l+N +Pi+Df++ k++      +++ g  +++ +sGag  g L + R +i     +     ++++ ++W+++l+  +                d+y
  EPX74264.1 491 FDVLTNVGPITDFAIGKAGslayyPQDNHGPLELVGTSGAGGAGGLVVCRRSIFPLVAGE--FGFQGCEALWSVSLTGRQRrsrrrvqpsymnmePDTY 587
                 ***************94446778844556889*******************997655555..577899*******9444334566778889998778** PP

      MMS1_N 370 lvlSfvneTlvlsidgdgeveevtedsglllsvpTLaagnlgdgs.lvQVtpngirliradk.rvsewkppngksiiaaaangeqllvalsgrelvyfe 466
                 l+lS  +e+  +s  g+ +++ev+ +s ++ +++T+ +g+l +g+ +vQ++p++i ++++   r++ ++  +++ +++ ++ + +++v+  g+++  ++
  EPX74264.1 588 LILSKADESFMFSA-GE-TFDEVE-NSDFNKHTRTIDVGSLMSGMrMVQICPTSIHVYDSTLkRTQLFNFGKNQVVVSTSICDPCIIVVFLGGNISLYR 683
                 **************.99.*****8.***************998766*********77776668999999998899999999999999999999999999 PP

      MMS1_N 467 ld.lieevekkdle 479
                 +d   +  +++dl+
  EPX74264.1 684 MDlRSQLLTRTDLH 697
                 97644444555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1426 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       411  (0.0229238); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.81u 0.31s 00:00:01.12 Elapsed: 00:00:00.46
# Mc/sec: 9227.47
//
Query:       EPX74265.1  [L=116]
Description: RNase P and RNase MRP subunit Pop8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    0.00033   20.9   0.1    0.00048   20.3   0.1    1.2  1  RNase_P_Rpp14  Rpp14/Pop5 family


Domain annotation for each model (and alignments):
>> RNase_P_Rpp14  Rpp14/Pop5 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.1   2.7e-08   0.00048       2      91 ..      13      97 ..      13     103 .. 0.85

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 2.7e-08
                   EEEEEEEESS.......-HHHHHHHHHHHHHHHHHHHHHHH--..EEEEEETTTTEEEEEEEGGGHHHHHHHH.HT--EETTEEEEEEEEEE CS
  RNase_P_Rpp14  2 Yllveilypde.eeelteksllkairesvqelfGdyglgklgsslsvkyfspatstaiiRcsresyrlvwaaL.tlitkiegrpvvfrvvrv 91
                   Y+lv+il++++ e+el+e +l + i  ++++ fG +g++      sv  ++ + s+  +Rc+ ++ ++++ aL ++i++   ++v f+v++ 
     EPX74265.1 13 YILVKILHNSSmETELDELTLRHFITLALSQSFGIFGSAI-----SVDILHRNASLLYLRCHINDSEKLLLALgSYIREP--EQVRFQVLHA 97
                   9*********85445999*******************765.....455677788**************999996677776..6888888885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       356  (0.0198561); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 820.06
//
Query:       EPX74266.1  [L=338]
Description: 3-keto sterol reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.2e-12   45.4   0.0    3.4e-11   43.0   0.0    2.2  1  adh_short     short chain dehydrogenase
    8.2e-06   25.9   0.0    1.8e-05   24.7   0.0    1.5  1  KR            KR domain
    1.8e-05   24.4   0.0    0.00015   21.4   0.0    2.1  2  adh_short_C2  Enoyl-(Acyl carrier protein) reductase
  ------ inclusion threshold ------
       0.14   12.3   0.5       0.14   12.3   0.5    1.8  2  ATPase_gene1  Putative F0F1-ATPase subunit Ca2+/Mg2+ transpor


Domain annotation for each model (and alignments):
>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.0   0.0   7.6e-15   3.4e-11       1     143 [.       5     188 ..       5     240 .. 0.85

  Alignments for each domain:
  == domain 1  score: 43.0 bits;  conditional E-value: 7.6e-15
                 SEEEEESTTSHHHHHHHHHHHH..........TT-EEEEEESCHHHHHHHHHHHHHT....TSEEEEEE-TTTSHHHHHHHHHHHHHHHSSESEEEE-- CS
   adh_short   1 kvvlvtGassGIGraiakelak..........eGakvvvvdrseekleevakelkee....gakalaiqvDvtdreevealvekavkklgkldvLvnNA 85 
                 k +l+tG  sG+G  ia +l++          e +++v++ rs +k+e ++k lke+    + ++ ++ +D++d+++vea+ +++++++ kld ++ NA
  EPX74266.1   5 KYALITGSNSGLGFGIAARLLEfykpriqdepETFTIVLTCRSRAKAEDACKRLKELfperKIRLEYVLLDLSDMQSVEAAAQEIKARYPKLDYVYLNA 103
                 679*****************97666666666677899999****************9995556689********************************* PP

                 -S..............S--SSGGGCSHHHHHHH.............HHHHTHHHHHHHHHHHHHHHHCTTEEEEEEEEGGGTSB- CS
   adh_short  86 Gi..............tgsgpfselseeewerv.............ievNltgvflltravlpamlkqssGrIvnvsSvagkvpv 143
                 G               t ++p++ l+  ++ +              ++ N++g + l   +l+  + +ss ++v ++S ++k+++
  EPX74266.1 104 GAwdlqgidwikaifaTIMNPVKALTFPTFYKEaigriskdsmghiFQSNVFGHYYLKTRLLELSVLGSSTKVVLTGSLVAKKES 188
                 **99999999999999555555555555533333555566666666999999999999999999999999999999999998765 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.0   4.1e-09   1.8e-05       4      93 ..       8     107 ..       6     119 .. 0.87

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 4.1e-09
                 EEETTTSHHHHHHHHHHHH.........HHS-EEEEE-SS..--HHHHHHHHHHH.HTT-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE----- CS
          KR   4 litGGlGgLGlelarwlae.........kgarhlvllsRsaaadedskaliaele.algaevevvaaDvsdkdavealleeikaeeppikGvihaAgvl 92 
                 litG   gLG  +a  l+e             ++vl+ Rs a+ ed+ ++++el  ++ ++ e+v +D+sd ++vea+ +eika+ p++  v+  Ag+ 
  EPX74266.1   8 LITGSNSGLGFGIAARLLEfykpriqdePETFTIVLTCRSRAKAEDACKRLKELFpERKIRLEYVLLDLSDMQSVEAAAQEIKARYPKLDYVYLNAGAW 106
                 89**************99988887765334678*******9999999999999861569*********************************9999987 PP

                 - CS
          KR  93 r 93 
                 +
  EPX74266.1 107 D 107
                 6 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.0   3.4e-08   0.00015      19      81 ..      39     107 ..      11     123 .. 0.84
   2 ?    0.4   0.0     0.089     4e+02      84     132 ..     135     185 ..     111     191 .. 0.81

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 3.4e-08
                   -EEEEEESSGGH.HHHHHHHHHHTTSE.E....EE--TTSHHHHHHHHHHHHHHHSSEEEEEE-----E CS
  adh_short_C2  19 aevvltdlneea.kkrveelaeelgae.v....lecDVtdeeqvealveevvekfgklDilvnnagiap 81 
                    ++vlt +++++ ++++++l+e ++++ +    + +D +d ++vea+++e+++++ klD++  nag  +
    EPX74266.1  39 FTIVLTCRSRAKaEDACKRLKELFPERkIrleyVLLDLSDMQSVEAAAQEIKARYPKLDYVYLNAGAWD 107
                   57999999999988999999999987665667799*******************************866 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.089
                   SS-GGGH-HHHHHHHHHHHTHHHHHHHHHHHH..HCTSCCEEEEEEEGGGT CS
  adh_short_C2  84 kgpfletsreefdraldvnlyslfllakaalp..lmkeggsivnlssvgae 132
                   k+ +  +s++++ ++++ n+ + ++l  ++l+  ++ ++ ++v + s+ a+
    EPX74266.1 135 KEAIGRISKDSMGHIFQSNVFGHYYLKTRLLElsVLGSSTKVVLTGSLVAK 185
                   5677889999****************9999996666666888888888775 PP

>> ATPase_gene1  Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1      0.85   3.8e+03      39      52 ..      15      28 ..      12      29 .. 0.68
   2 ?   12.3   0.5   3.1e-05      0.14      10      37 ..     241     267 ..     240     268 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.85
  ATPase_gene1 39 glllGlaaGfynvy 52
                  gl++G+aa ++ +y
    EPX74266.1 15 GLGFGIAARLLEFY 28
                  67788887655555 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 3.1e-05
  ATPase_gene1  10 elvapillggllGywLDkkfgtspwfli 37 
                   +++++i++++ lG+wL +++g spw ++
    EPX74266.1 241 TFLGFIVIFAKLGFWLCRLLG-SPWHTV 267
                   6899****************9.799775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       636  (0.0354733); expected 358.6 (0.02)
Passed bias filter:                      572  (0.0319036); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.31s 00:00:00.88 Elapsed: 00:00:00.51
# Mc/sec: 2000.77
//
Query:       EPX74267.1  [L=486]
Description: tRNA dihydrouridine synthase Dus2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-51  175.8   0.0    1.8e-51  175.1   0.0    1.3  1  Dus            Dihydrouridine synthase (Dus)
  ------ inclusion threshold ------
      0.029   13.7   0.0      0.067   12.5   0.0    1.6  1  TMP-TENI       Thiamine monophosphate synthase
        0.1   12.4   0.0       0.41   10.4   0.0    1.9  2  FAD_binding_4  FAD binding domain
       0.11   12.4   0.0       0.47   10.3   0.0    2.0  3  TP_methylase   Tetrapyrrole (Corrin/Porphyrin) Methylases


Domain annotation for each model (and alignments):
>> Dus  Dihydrouridine synthase (Dus)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.1   0.0   3.9e-55   1.8e-51       2     225 ..      12     257 ..      11     333 .. 0.84

  Alignments for each domain:
  == domain 1  score: 175.1 bits;  conditional E-value: 3.9e-55
                 E---TTTS-HHHHHHHHHTT-S..................SEEEEEEEE-SSS---HHHHHHH-GGGGGTSCEEEEEE-S-HHHHHHHHHHHHHTT-SC CS
         Dus   2 laPmagvtdlpfRelvrefgat..................aLvvtemvtakaivreekvrirmlseeeeetplavQlggsdpallaeaAklvadlgade 82 
                 laPm+++ +lp R l  ++ga+                  + +v + v+  ++v++ + +++   +  e++ l++Qlg+++p+l+++aAklvad ++ +
  EPX74267.1  12 LAPMVRIGELPTRLLALRYGANlvwgpeivdkalvggslvQRIVNDRVNCIDFVKPPTNKVLFRVHPLEANRLVFQLGSASPDLAVQAAKLVAD-DVAG 109
                 8*********************99999999999999777666677777777888876666555555555569**********************.**** PP

                 EEEEESSTTEEETTEEEGGGGGGSHHHHHHHHHHHHCCSSS-EEEEEESESS..TTTC.HHHHHHHHHHCT-SEEEEESS.ECCCTT-C..G--CHHHH CS
         Dus  83 IdlNvGCPskkvtrggaGaaLlrkpdlvaqivkavvkaveiPvtvkirigid..deeenalelakiveaaGaqaltvHgR.traqnyeg..tadweaIk 176
                 IdlN+GCP++++ + g+Ga Ll++pd + +i++a+vk v+iP+ v i+ +i+  +++e++l l+++++ +G+ a+t+H+R t+++n e   + ++++I 
  EPX74267.1 110 IDLNCGCPKHFSVHAGMGAGLLKEPDRLISILQALVKEVGIPHNVSISCKIRllETKEKTLALIERLCSTGIRAITIHCRtTPMRNTEPahREYLQDIV 208
                 ********************************************************************************888888888888899**** PP

                 HHHHH-SS-EEEESS--SHHHHHHHHHHH--SEEEESCHHCCSTTHHHH CS
         Dus 177 evkqavsipviaNGdIkdaedaqaileetGadgvmigrgalgnPwlfae 225
                 +++++ ++ v+aNGd+   e+ ++ +e+ G dgv+i+r+a++n   f++
  EPX74267.1 209 DLCKKYNVAVLANGDVSGYEEGKKLIEKYGLDGVLIARAAEKNVSCFRA 257
                 ******************************************9888874 PP

>> TMP-TENI  Thiamine monophosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.5e-05     0.067      11      67 ..     165     225 ..     156     247 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.5e-05
    TMP-TENI  11 kneellevveealkggvtlvqlRek....eldarellelaeklaalcrkygvpliindrvd 67 
                  +e+ l+++e++++ g++++++  +      ++ + +e  +++ +lc+ky+v+++ n +v 
  EPX74267.1 165 TKEKTLALIERLCSTGIRAITIHCRttpmRNTEPAHREYLQDIVDLCKKYNVAVLANGDVS 225
                 4678999***********99998885565577888999*******************9985 PP

>> FAD_binding_4  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.59   2.6e+03      91     109 ..      37      55 ..      25      63 .. 0.77
   2 ?   10.4   0.0   9.2e-05      0.41       6      42 ..     197     238 ..     194     252 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.59
                    GGGTTCGSBHHHTTTTT-E CS
  FAD_binding_4  91 epgsgipgtvGGaiatnag 109
                     p+ ++ + vGG ++++++
     EPX74267.1  37 GPEIVDKALVGGSLVQRIV 55 
                    478889999****999876 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 9.2e-05
                    EESSHHHHHHHHHHHHHCTSCEEEESSSTTEE.STTC....S CS
  FAD_binding_4   6 rpeseeevaaalrlaneaglpvlvrGgGssll.gqav....a 42 
                    +p++ e +++++ l++++++ vl+ G  s++  g+++     
     EPX74267.1 197 EPAHREYLQDIVDLCKKYNVAVLANGDVSGYEeGKKLiekyG 238
                    6999**************************998887654443 PP

>> TP_methylase  Tetrapyrrole (Corrin/Porphyrin) Methylases
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00011      0.47      36     102 ..     169     236 ..     156     244 .. 0.75
   2 ?   -2.7   0.0       1.1   4.8e+03     146     171 ..     353     376 ..     341     390 .. 0.74
   3 ?   -3.3   0.0       1.6   7.1e+03      23      37 ..     409     423 ..     409     456 .. 0.63

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00011
  TP_methylase  36 aleilldllaeel...eleapmgkekepleeayeeiaealaealragkdVvllvsGDPlvygtgselvea 102
                   +l+++++l+        ++ ++++  ++ e a++e  + ++++++++ +V++l  GD + y  g +l+e+
    EPX74267.1 169 TLALIERLCSTGIraiTIHCRTTPM-RNTEPAHREYLQDIVDLCKKY-NVAVLANGDVSGYEEGKKLIEK 236
                   5555555555444654444444444.788899**************9.7************999999865 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1.1
  TP_methylase 146 lakeeereleallangdtlvllkapr 171
                   l+  +e+ l++l+a   t v+++ p+
    EPX74267.1 353 LS--NEATLKQLAAFSFTKVFVYKPE 376
                   33..7788888888889999988887 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 1.6
  TP_methylase  23 lktadvvlgddsral 37 
                   + +ad++++++++ +
    EPX74267.1 409 IDQADLIICSKEEQS 423
                   568999999884432 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (486 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       583  (0.0325172); expected 358.6 (0.02)
Passed bias filter:                      452  (0.0252106); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 3491.57
//
Query:       EPX74268.1  [L=613]
Description: heat shock protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   3.2e-233  775.3  10.3   3.6e-233  775.2  10.3    1.0  1  HSP70           Hsp70 protein
    4.6e-19   68.4   1.5    8.3e-18   64.3   0.6    2.1  2  MreB_Mbl        MreB/Mbl protein
     0.0013   18.0   0.3     0.0033   16.7   0.3    1.6  1  Hydantoinase_A  Hydantoinase/oxoprolinase
      0.005   16.6   0.0      0.023   14.5   0.0    2.1  2  FGGY_C          FGGY family of carbohydrate kinases, C-termin
  ------ inclusion threshold ------
      0.022   14.0   0.0      0.072   12.3   0.0    1.9  1  StbA            StbA protein
      0.031   13.3   1.9       0.26   10.2   1.0    2.8  2  DDR             Diol dehydratase reactivase ATPase-like domai
       0.55   10.7   7.1         14    6.2   2.2    3.8  2  FtsA            Cell division protein FtsA


Domain annotation for each model (and alignments):
>> HSP70  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  775.2  10.3  1.4e-236  3.6e-233       1     595 [.       8     610 ..       8     613 .] 0.97

  Alignments for each domain:
  == domain 1  score: 775.2 bits;  conditional E-value: 1.4e-236
                 EEEEEEXSSEEEEEEEETTEEEEEXXTTSXSSEESEEEEXTTSEEETHHHHHCTTTTGGGEEEXGGGTTTXBTTSHHHHHHHTTXSSEEEEETTSBEEE CS
       HSP70   1 viGiDLGttnsvvavmeggkievianeegnrttPsvvaFtkkerlvGeaAkrqavtnpkntvfsvKrliGrkfsdpevqkeikelpykvvkkengkavv 99 
                 +iGiDLGtt+s+vav+e  ++e+i n++g+rttPs+vaFt+ erlvG+aAk+qa++np+ntvf++KrliGr+++dpe qk+ik++p+kv  + ng +++
  EPX74268.1   8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTEAERLVGDAAKNQAAMNPRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDN-NGVPTI 105
                 59****************************************************************************************99.****** PP

                 EEEETTE..EEEHHHHHHHHHHHHHHHHHHHHTSBEEEEEEEEXTTXXHHHHHHHHHHHHHTTXEEEEEEEHHHHHHHHHHTCCSS.SCEEEEEEEEXS CS
       HSP70 100 eveaage..kftpeqisamvLkklketaeaylgkkvtdavitvPaYfndaqRqatkdAgkiAGLnvlRivNepTAaalaYGldkkd.kernvlvyDlGg 195
                 ev++ ge  +ft+++isamvL+k+ke+ ea l+k+v++av+tvPaYf d+qR atkdAg+iAGLnvlRi+NepTAaa+aYGld k    +nvl++DlGg
  EPX74268.1 106 EVDYLGEkkQFTAQEISAMVLTKMKEISEAKLNKRVEKAVVTVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKTeAAKNVLIFDLGG 204
                 *****9999*************************************************************************9655489********** PP

                 SXEEEEEEEEETTEEEEEEEEEETTXSHHHHHHHHHHHHHHHHHHHHSXXGGGSHHHHHHHHHHHHHHHHHTTTSSCSEEEEEEEEEETTTEEEEEEEE CS
       HSP70 196 gtfdvSilelekGvfevkaTagDthlGGedfDealvehlveefkkkegidlskdkkalqrlkeaaekaKkeLSsskqteinleietvdedgkdlsekls 294
                 gtfdvS+l+++ Gvfev+aTagDthlGGedfD+alveh+++efk+k++id+s+d++al+rl++a+e+aK++LSs   t++++e++++ + g+d+s++++
  EPX74268.1 205 GTFDVSLLKIQGGVFEVLATAGDTHLGGEDFDAALVEHFIQEFKRKQKIDISEDPRALRRLRSACERAKRALSS--VTQTTIEVDSLSN-GVDFSSSIT 300
                 **************************************************************************..6788889999999.********* PP

                 HHHHHHHHHHHHHHTHHHHHHHHHHCTEEGGGCSEEEEESGGGGSHHHHHHHHHHTT.CHHBSSSHTTTHHHHHHHHHHHHHCTC...GCSHCCEEEEB CS
       HSP70 295 RakfeelvedllertlepvekalkdaklkkeeidevvlvGGstRiPkvqelvkelfg.kepsktvnpDeavaiGAAvqagvlsge...eevkdllllDv 389
                 Ra+fe++++  +++t++pvek+lkd+k+ k +++++vlvGGstRiPkvq lv+++f+ ++++k++npDeava+GAAvqa+vl+ +    ++ dllllDv
  EPX74268.1 301 RARFEDINATTFKKTIDPVEKVLKDSKVAKADVHDIVLVGGSTRIPKVQRLVSDFFQgRPLNKSINPDEAVAYGAAVQAAVLTNKadsDKTADLLLLDV 399
                 ********************************************************98************************9986667899******* PP

                 ESS-EEEEETTTEEEEEESTTCBSSEEEEEEEEESSTTSSSEEEEEEESSSSBGGGSEEEEEEEEECESSCSTTCSEEEEEEEEETTSCEEEEEEETTT CS
       HSP70 390 tpLslgietlggvmtkliernttiptkksqvfstaadnqtaveievlqgerelvkdnkllgsfeldgippaprGvpqieVtfdidanGiltvsakdket 488
                 +pLslg+ ++g+v+  + +rnt+ipt k+++f+t+adnqt+v+  v+qger   ++n++lg+f+l+gipp+prG+ ++e tf++d+nGil+v+a +k+t
  EPX74268.1 400 VPLSLGVAMEGNVFGVVCPRNTAIPTIKKRTFTTVADNQTSVTFPVYQGERVNCSENEALGEFQLTGIPPMPRGQAELEATFELDVNGILKVTALEKTT 498
                 *************************************************************************************************** PP

                 CCEEEEEEECCSS.SBHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH..GGGSTHHHHHHHHHHHHHHHCHTTSSC..HHHHHHH CS
       HSP70 489 gkeeeitieaseg.lseeeiekmvkdaeesaeedkkkkeaieakneaeelvyslekkleee..aekvseaekekvesaieeLkeeleeee..keeieak 582
                 g++++i+i++s g ls+++i++m+++a++++++dk  +++ eak ++e+++ ++e++++e   + k+++ +k+k+e++++e  ++le e+  ++++++ 
  EPX74268.1 499 GRTAHIEITNSVGhLSSAKIQEMIENADKFKQQDKDFAKRLEAKSQLEAYISNIETTISEPnvMMKLKRGDKSKIEQQLAECMSQLELEDsnTDALRKS 597
                 ************99*********************************************99889999***********999988775544449999999 PP

                 HHHHHHHHHHHHH CS
       HSP70 583 teelkkvvekiae 595
                   +lk++v+k ++
  EPX74268.1 598 ELRLKRTVQKAFA 610
                 9999999988765 PP

>> MreB_Mbl  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0     0.017        44       3      60 ..       8      63 ..       6      70 .. 0.62
   2 !   64.3   0.6   3.3e-21   8.3e-18      75     318 ..     122     378 ..     116     387 .. 0.79

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.017
                EEEEEE-SSEEEEEETTTEEEEEEES-EEEETTT--EEEESHHHHTTTTS-GTTEEEE CS
    MreB_Mbl  3 dlgiDLGtantlvyvkgkgivlnepsvvAikkktkkvlavGeeAkkmlgktpgnikav 60
                 +giDLGt+   v v ++  v   p     +++ +  +a  +eA++++g + +n  a+
  EPX74268.1  8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPS-FVAF-TEAERLVGDAAKNQAAM 63
                69********9999988777765555444443332.2222.45555555555555555 PP

  == domain 2  score: 64.3 bits;  conditional E-value: 3.3e-21
                 HHHHHHHHHHHHTSS-S.S--EEEEEE-SS--HHHHHHHHHHHHHTT-SEEEEEEHHHHHHHHTT--TT..SSS-EEEEEE-SS-EEEEEEETTEEE.. CS
    MreB_Mbl  75 eellkyfikkvkkkksl.skprvvicvPsgiteverrAvkeaakkaGarevllieeplaAAiGaglpve..epsgnmvvdiGggttevavislggiv.. 168
                 ++++ + +k+++++k   + ++ v++vP   ++ +r A k+a   aG +   +i+ep aAAi  gl+ +  +++  ++ d+Gggt +v+++ ++g v  
  EPX74268.1 122 SAMVLTKMKEISEAKLNkRVEKAVVTVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKteAAKNVLIFDLGGGTFDVSLLKIQGGVfe 220
                 45666667777775544266899***************************************99988751156667999************99875522 PP

                 ...EEEEES-SHHHHHHHHHHHH....HHHHSEE--H..HHHHHHHHHH-BSS--HHHH.EEEEEEEETTTTCEEEEEEEHHHHHHHHHHHHHHHHHHH CS
    MreB_Mbl 169 ...tsksvrvaGdeldeaiikyi....rkkynlliGe..rtaekikieigsavkeeeee.kmeikGrdlvtglpkevevsseevrealkepvsaiveav 257
                    t+   +++G+++d a++++     ++k ++ i e  r  ++++ +   a+   ++  +++i+   l +g+  + +++ ++ ++  ++++++ ++ v
  EPX74268.1 221 vlaTAGDTHLGGEDFDAALVEHFiqefKRKQKIDISEdpRALRRLRSACERAKRALSSVtQTTIEVDSLSNGVDFSSSITRARFEDINATTFKKTIDPV 319
                 2224567899******99988751222556667777622344555555555554433336999999********************************* PP

                 HHHHHTS-HHHHHHHHHH-EEEESGGGGSBTHHHHHHHHHS.S-EEE-SSTTTHHHHHHHHT CS
    MreB_Mbl 258 kevLektppeLaadivdrgivltGGgallkgldkllseetg.lpvkvaedpltcvakGtgkv 318
                 ++vL++ +    ad+ d  ivl+GG++ +  +++l+s+ ++  p + + +p ++va G++  
  EPX74268.1 320 EKVLKDSKVA-KADVHD--IVLVGGSTRIPKVQRLVSDFFQgRPLNKSINPDEAVAYGAAVQ 378
                 *****98864.688876..*******************98636899999*********9765 PP

>> Hydantoinase_A  Hydantoinase/oxoprolinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.3   1.3e-06    0.0033       7      97 ..     121     213 ..     116     226 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 1.3e-06
  Hydantoinase_A   7 vnAylspilreyle.svekslekrgakarlmvmqsdGg.lvsadearkkpvetilSGPaaGvvgaaatsklagekkvItfDmGGTstDvslik 97 
                     + A++  +++e  e +++k++ek+ ++ + ++ +s+   + +a ++ +  v  i+  P a ++++   +k++ +k+v+ fD+GG ++Dvsl+k
      EPX74268.1 121 ISAMVLTKMKEISEaKLNKRVEKAVVTVPAYFSDSQRAaTKDAGAIAGLNVLRIINEPTAAAIAYGLDAKTEAAKNVLIFDLGGGTFDVSLLK 213
                     56777777777654279999999999999999999865155788999999999*********999999**********************976 PP

>> FGGY_C  FGGY family of carbohydrate kinases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.89   2.3e+03      41     109 ..     112     167 ..     102     194 .. 0.48
   2 !   14.5   0.0   8.8e-06     0.023     145     196 ..     325     381 ..     290     383 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.89
      FGGY_C  41 egsiavagslvawlldnlglreeirdageveeslaelaaaeavadaggvvfvpaf.sglrapywdpdarg 109
                 e+ ++ a+++ a +l +  + +ei++a+           +++ ++ + v++  +f   +ra   d++a +
  EPX74268.1 112 EKKQFTAQEISAMVLTK--M-KEISEAK-----------LNKRVEKAVVTVPAYFsDSQRAATKDAGAIA 167
                 44455555554444444..2.1122222...........2222222233333444444555555555544 PP

  == domain 2  score: 14.5 bits;  conditional E-value: 8.8e-06
      FGGY_C 145 d...sgkpldrlavdGGgskndllmqllAdilg.vpVerpkt.aeatalGaAilAav 196
                 d    ++++  ++++GG ++ + +++l  d ++ +p+ +  + +ea+a GaA+ Aav
  EPX74268.1 325 DskvAKADVHDIVLVGGSTRIPKVQRLVSDFFQgRPLNKSINpDEAVAYGAAVQAAV 381
                 33334566999*********************88***999888************98 PP

>> StbA  StbA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   2.8e-05     0.072     151     199 ..     183     233 ..     158     275 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 2.8e-05
        StbA 151 agfealkeldeleslLiiDlGGttLDva..kvrgklegiskvkgdskiGvs 199
                  ++  +++ +   ++Li DlGG t Dv+  k++g + ++  + gd ++G  
  EPX74268.1 183 IAYGLDAKTEAAKNVLIFDLGGGTFDVSllKIQGGVFEVLATAGDTHLGGE 233
                 45667788899999*************955688999999999999999864 PP

>> DDR  Diol dehydratase reactivase ATPase-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   1.0    0.0001      0.26     130     167 ..     192     228 ..      84     230 .. 0.88
   2 ?   -0.2   0.0      0.15   3.8e+02     274     296 ..     332     354 ..     297     360 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.0001
         DDR 130 GtekplailDlGaGstDaalieeegevkavhlAGAGem 167
                  + k++ i DlG+G+ D +l++ +g v    lA AG++
  EPX74268.1 192 EAAKNVLIFDLGGGTFDVSLLKIQGGVFE-VLATAGDT 228
                 4578899*******************999.59999985 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.15
         DDR 274 didfvvlvGgsalDfEipelvtd 296
                 d++ +vlvGgs+    +++lv+d
  EPX74268.1 332 DVHDIVLVGGSTRIPKVQRLVSD 354
                 56779******999999998887 PP

>> FtsA  Cell division protein FtsA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   2.2    0.0055        14       2      86 ..      10     356 ..       9     381 .. 0.46
   2 ?    0.7   0.2      0.27   6.8e+02      36      85 ..     509     584 ..     484     609 .. 0.61

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0055
                 EEEE-SSSEEEEEEETTEEEEEEEES-.-HHHHHHHHHHHHT--HHHHHHHHHHH--S--....................................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....................................... RF
        FtsA   2 lvDiGagktdvavaedgalvhlrvigv.ggngitkdiakalrtaveeAerikikyGsala....................................... 60 
                 ++D+G++ ++vav e    +++++i+  +g   t + +     a+ eAer+    G a +                                       
  EPX74268.1  10 GIDLGTTYSCVAVWET---ANVEIIPNdQGARTTPSFV-----AFTEAERLV---GDAAKnqaamnprntvfdakrligrryedpetqkdikhwpfkvi 97 
                 6888888888888888...4666776654444444421.....222222222...22222222222233333332222222324444444444444444 PP

                 ...............EEEEEHHHHH.......................................................................... CS
                 ...............xxxxxxxxxx.......................................................................... RF
        FtsA  61 ...............ekeigrkels.......................................................................... 70 
                                +k+++ +e+s                                                                          
  EPX74268.1  98 dnngvptievdylgeKKQFTAQEISamvltkmkeiseaklnkrvekavvtvpayfsdsqraatkdagaiaglnvlriineptaaaiaygldakteaakn 196
                 444444444444444222222222244444444443333335555555555555555555555555555555555555555555555555555555555 PP

                 ................................................................................................... CS
                 ................................................................................................... RF
        FtsA  71 ................................................................................................... 70 
                                                                                                                    
  EPX74268.1 197 vlifdlgggtfdvsllkiqggvfevlatagdthlggedfdaalvehfiqefkrkqkidisedpralrrlrsacerakralssvtqttievdslsngvdf 295
                 555555555555555555555555555555555555555444444444444444444444444444444444444444444444444445555555555 PP

                 .............................................GGGGSTTHHHHHHHHH CS
                 .............................................xxxxxxxxxxxxxxxx RF
        FtsA  71 .............................................ggsalpnleelaeral 86 
                                                              g++ +p++++l+++ +
  EPX74268.1 296 sssitrarfedinattfkktidpvekvlkdskvakadvhdivlvgGSTRIPKVQRLVSDFF 356
                 5555555555555555555555666666666666666666666666666666666666665 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.27
                 H....HHHHHT--HHHHHHHHHHH--S--...............EEEEEHHHHH..................GGGGS.TTHHHHHHHH CS
                 x....xxxxxxxxxxxxxxxxxxxxxxxx...............xxxxxxxxxx..................xxxxx.xxxxxxxxxx RF
        FtsA  36 d....iakalrtaveeAerikikyGsala...............ekeigrkels..................ggsal.pnleelaera 85 
                 +     +  +++ +e+A + k ++    +                        s                  ++s++ ++l+e++++ 
  EPX74268.1 509 SvghlSSAKIQEMIENADKFKQQD----KdfakrleaksqleayI--------SniettisepnvmmklkrgDKSKIeQQLAECMSQL 584
                 444544566888888888888432....12222344434333330........14444445555557777775555525677777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (613 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1120  (0.0624686); expected 358.6 (0.02)
Passed bias filter:                      561  (0.0312901); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.68u 0.30s 00:00:00.98 Elapsed: 00:00:00.47
# Mc/sec: 3950.31
//
Query:       EPX74269.1  [L=173]
Description: cyclophilin family peptidyl-prolyl cis- trans isomerase Cyp3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-49  168.7   0.2    1.2e-49  168.6   0.2    1.0  1  Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans iso


Domain annotation for each model (and alignments):
>> Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  168.6   0.2   6.8e-54   1.2e-49       9     157 ..      18     171 ..       8     172 .. 0.90

  Alignments for each domain:
  == domain 1  score: 168.6 bits;  conditional E-value: 6.8e-54
  Pro_isomerase   9 kGrivieLfadkaPktvenFlklvkeg..........fYdgttFhRvikgfmvqgGdptgktsageqekkggesiraipdEitsklkh.krGalam 93 
                     Gr+ ++Lf++++Pkt+enF++++ +g           Y++ tFhR+i++fm+qgGd+++++ +g+++   g   r++pdE+ + lkh ++G+l+m
     EPX74269.1  18 IGRVRFRLFSNTVPKTAENFRQFC-TGeakgpnrnpiGYKNATFHRIIPDFMIQGGDFVSGDGTGSTT-IYGS--RTFPDEN-FALKHdRPGLLSM 108
                    69**********************.666999999**************************97755533.3332..79*****.89999788***** PP

  Pro_isomerase  94 artgkepnsagsqFfItlkeaphldgkytvFGkVveGmdvvekiekvetde.erpkknvkivsae 157
                    a++g  ++s+g+qFfIt+ ++++ldgk++vFG+V+eG+dvv++ie++++   +rpk nv+i +++
     EPX74269.1 109 ANAG--KDSNGCQFFITTVPCDFLDGKHVVFGEVIEGFDVVKQIESTPVGTsSRPKMNVVIMECG 171
                    ***8..6***************************************9999999**********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       167  (0.00931452); expected 358.6 (0.02)
Passed bias filter:                      159  (0.00886831); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1274.94
//
Query:       EPX74270.1  [L=430]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.9e-31  106.7   7.8    9.7e-31  106.0   7.8    1.4  1  DUF3844   Domain of unknown function (DUF3844)
  ------ inclusion threshold ------
        8.8    6.8  10.2         76    3.8  10.2    2.4  1  EGF_2     EGF-like domain


Domain annotation for each model (and alignments):
>> DUF3844  Domain of unknown function (DUF3844)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.0   7.8   1.1e-34   9.7e-31       1     104 [.     321     420 ..     321     421 .. 0.97

  Alignments for each domain:
  == domain 1  score: 106.0 bits;  conditional E-value: 1.1e-34
     DUF3844   1 CfeseeacekatnsCsghGecvkklkskeegeacfvCkCeatvekkkedkkkttkwgGeaCekkDvsvefvllalttvalvvlvilsislLfsvGeeeL 99 
                 Cf +eeac+katnsCsg+Gecvk ++    +e+cfvC+C++tv  +++  ++t++w+G++C+k+D+s+ef+++++++++ ++l++++i+lLfsvG+eeL
  EPX74270.1 321 CFLTEEACKKATNSCSGRGECVKYAN----KESCFVCQCASTVVAAGNGGNRTVQWTGDTCSKQDISMEFQFFFWFAIVGFGLLVFCIKLLFSVGQEEL 415
                 ***********************977....599**************99************************************************** PP

     DUF3844 100 pgvlg 104
                 ++vl+
  EPX74270.1 416 ANVLT 420
                 ***96 PP

>> EGF_2  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8  10.2    0.0084        76       1      24 [.     328     357 ..     328     377 .. 0.66

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.0084
       EGF_2   1 CsasdeiCgghGtCvnqcG.....qCdC.d 24 
                 C+   + C+g+G Cv+  +     +C+C +
  EPX74270.1 328 CKKATNSCSGRGECVKYANkescfVCQCaS 357
                 7777789*******94445776766*9951 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (430 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       627  (0.0349713); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 3212.05
//
Query:       EPX74271.1  [L=982]
Description: cytoplasmic valine-tRNA ligase Vrs1/Vas1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   2.7e-219  729.4   0.3   5.2e-218  725.1   0.3    2.2  1  tRNA-synt_1    tRNA synthetases class I (I, L, M and V)
    1.8e-31  109.2   0.7      4e-31  108.0   0.7    1.6  1  Anticodon_1    Anticodon-binding domain of tRNA
    1.8e-17   63.2   1.1    1.1e-09   37.6   0.0    4.9  5  tRNA-synt_1g   tRNA synthetases class I (M)
    1.3e-09   37.9   3.4    4.3e-06   26.4   0.0    2.9  3  tRNA-synt_1_2  Leucyl-tRNA synthetase, Domain 2
    0.00015   21.3   0.0       0.37   10.1   0.0    2.9  2  tRNA-synt_1e   tRNA synthetases class I (C) catalytic domain
  ------ inclusion threshold ------
      0.093   11.6   0.0      0.093   11.6   0.0    2.2  2  tRNA-synt_1c   tRNA synthetases class I (E and Q), catalytic 


Domain annotation for each model (and alignments):
>> tRNA-synt_1  tRNA synthetases class I (I, L, M and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  725.1   0.3  1.8e-221  5.2e-218       2     602 .]     108     731 ..     107     731 .. 0.97

  Alignments for each domain:
  == domain 1  score: 725.1 bits;  conditional E-value: 1.8e-221
  tRNA-synt_1   2 lyekWeeedvfkkelekeke.kke..filvdgPPyvtGslHiGhalaktlkdivirykrmkGkevlyvpGwDhaGlaieakvekklgakekkerkklg 96 
                  +y++W ++++f++e+  + + k+e  f+++ +PP+vtG+lHiGhal+ +++d + r++rmkGk+vl++ G+DhaGl+++++vekkl+a++k++r++++
   EPX74271.1 108 WYDWWVKSGFFEPEFGPDGKvKEEgqFVITSPPPNVTGALHIGHALTIAIQDSLARWNRMKGKTVLFLGGFDHAGLSTQSVVEKKLWAEKKQTRHDYA 205
                  9*************987766544455************************************************************************ PP

  tRNA-synt_1  97 reefrekvrewkaeyaeeirkqvkrlGvsvDfdreylTldkeleeavkevfvrladkgliyrgkklvnwstklktalselEveykdkk.......... 184
                  r++f++ v++wk+ey+e+i+kq++rlG s+D++re++T+d++l+ av+e+fvrl+d+ +iyr+++lvnw+t+l+t+ls+lEve+ +++          
   EPX74271.1 206 RNDFVDIVWKWKEEYHERIKKQMSRLGGSFDWKREAFTMDENLTRAVVETFVRLHDEKIIYRANRLVNWCTALQTTLSNLEVENVEVTgrteikvpgy 303
                  ************************************************************************************************** PP

  tRNA-synt_1 185 ......dalihvafpladkeevklviaTTtPeTllgdtavavnpeldyvitkeklilaeallkslvkkesekkiledergkeLegkevelplvnrkip 276
                        ++l+++a+++++++e +++iaTT+PeTllgdta+av+p+                               d+r+k+L+gk v++p+ +r +p
   EPX74271.1 304 dhlvevGVLTSIAYEVEGSDE-RIIIATTRPETLLGDTAIAVHPQ-------------------------------DPRYKHLHGKSVKHPFCDRILP 369
                  *********************.***********************...............................********************** PP

  tRNA-synt_1 277 iiadd.yvdkeaGtGvVkiaPahdedDyevgkkynlevinildedgtlteeaaefeglkvfdarkkvveelkekglllkaekiehsvpfcerskkpii 373
                  ii dd  vd+e+GtG+Vki+Pahd++Dyevgk++nl +inil+++gtl+e ++ef+g+k+fd r k+ve lke gl++ ++++ + +p+c ++ ++i+
   EPX74271.1 370 IICDDiAVDMEFGTGAVKITPAHDPNDYEVGKRHNLAFINILNDNGTLNEACGEFAGMKRFDVRIKIVERLKELGLFVGTQDNAMVIPVCGKTSDIIE 467
                  ***98469****************************************************************************************** PP

  tRNA-synt_1 374 yrateqWfvrvkeladaalkave..kvqfvpkskekryaswleniqdWciSRqrwWGhriplfvsketeevvvre.elkelvagreeeeaekkaleke 468
                  + +++qW+v++ke+a+aa +av+  ++ + p+ ++k++ +w+eniqdWciSRq+wWGhr+p+++ k  +    ++ +  ++  gr++ee+e+ka +  
   EPX74271.1 468 PIMKPQWWVNQKEMANAAADAVRsgEIDIAPEVSRKEFIRWMENIQDWCISRQLWWGHRVPAYFVKLSDAKNHDKsDDRYWFSGRTTEEVEEKAKAAF 565
                  ***********************99**************************************99977755554449999**************9999 PP

  tRNA-synt_1 469 akdklkkekgelekdedvlDvWFsSgswpfstlgypeedteelkkffpadmlleGlDiirgWvarlillslaltgsePfkevlvhglvrdeeGrKmSK 566
                    +++     +le+dedvlD+WFsSg+wpfstlg+p+  t ++k+f+p+ ++++G+Di+++W+ar+++l+++ltg++Pfk+v++h+lvrd++GrKmSK
   EPX74271.1 566 PGKSF-----TLEQDEDVLDTWFSSGLWPFSTLGWPND-TADFKTFYPTVLMETGWDILFFWIARMVMLGIKLTGQVPFKRVFCHALVRDAQGRKMSK 657
                  99999.....***************************9.*********************************************************** PP

  tRNA-synt_1 567 slgNvidpldvik.....................................kygadalRltli.lsdvgrdinls 602
                  slgNv+dp+dvi+                                     ++g+dalR+tl+ l++ grd+nl+
   EPX74271.1 658 SLGNVVDPIDVIEgislqslhdkllvgnldsrevekakkgqklsypkgipQCGTDALRFTLCsLTSGGRDLNLD 731
                  **************************************************************9********986 PP

>> Anticodon_1  Anticodon-binding domain of tRNA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.0   0.7   1.3e-34     4e-31       1     146 [.     776     922 ..     776     927 .. 0.86

  Alignments for each domain:
  == domain 1  score: 108.0 bits;  conditional E-value: 1.3e-34
  Anticodon_1   1 drwilselnklvkevteayeeyrfnkaasalyeffwndlcdwylelvkprlysesaedkra.aqevllevletllrllaPfmPfitEelwqr.....e 92 
                  ++wi ++ln +v  +++++ee++f +a sa+y+f++ +lcd+y+e +k  +++ +++++ + a+++l++vl+t lrl++PfmP++tEe++qr     +
   EPX74271.1 776 EKWIFHRLNIAVDAMNKYMEEMNFLQATSAIYQFWLYELCDVYIENSKYLISDGTPTQQ-EsAKQTLYTVLDTSLRLMHPFMPYVTEEMFQRlprrpN 872
                  69************************************************987776665.66*****************************9866432 PP

  Anticodon_1  93 eeelgkkesimlaewpe.kaeel.ekeleeeevellkeivkairklrselkikpss 146
                      +   si++a++p   ++++ e++   +++e ++ +v+  r++ ++++ik ++
   EPX74271.1 873 ----DTTPSIVKAKFPMvREDYAfEQA--AKDYESIITVVHSSRSMMADNGIKSDA 922
                  ....45699*******95555556433..479999888888888888888888765 PP

>> tRNA-synt_1g  tRNA synthetases class I (M)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.6   0.0   3.5e-13   1.1e-09       2     136 ..     135     288 ..     134     295 .. 0.78
   2 !   11.3   0.1   3.6e-05      0.11     182     239 ..     472     529 ..     452     541 .. 0.77
   3 !    7.8   0.0   0.00041       1.2     313     349 ..     639     676 ..     598     691 .. 0.78
   4 ?   -2.7   0.0      0.64   1.9e+03     344     366 ..     708     730 ..     702     737 .. 0.86
   5 ?   -1.0   0.1      0.19   5.8e+02     173     252 ..     770     848 ..     756     866 .. 0.71

  Alignments for each domain:
  == domain 1  score: 37.6 bits;  conditional E-value: 3.5e-13
                   EEEE--B--SS---HHHHHHHHHHHHHHHHHHHTT-EEEEEEEE---SHHHHHH......HHHTTS-....HHHHH.......HHHHHHHHHHHHHT CS
  tRNA-synt_1g   2 lvttalpYangklHlGhllevisaDifaRykrlrgeevlfvcgtDehGtpielk......Aekegvt....peelv.......ekvheeikelfkkl 81 
                   ++t++ p ++g+lH+Gh+l++ + D +aR++r++g+ vlf++g D+ G  ++        Aek+++      +++v       e++he+ik+++++l
    EPX74271.1 135 VITSPPPNVTGALHIGHALTIAIQDSLARWNRMKGKTVLFLGGFDHAGLSTQSVvekklwAEKKQTRhdyaRNDFVdivwkwkEEYHERIKKQMSRL 231
                   79**********************************************98765411122255554431111344442222222689999******** PP

                   T---SEEEE..TTSHHHHHHHHHHHHHHHHTT-EEEEEEEEEEETTTTEEE-GGG-E CS
  tRNA-synt_1g  82 nisfdkygr..ttseehkelvqeifkklkekgliyekeieqlycpkderflpdryve 136
                   + sfd   +  t +e+ +++v e f +l++++ iy+ +  + +c++ +++l++ +ve
    EPX74271.1 232 GGSFDWKREafTMDENLTRAVVETFVRLHDEKIIYRANRLVNWCTALQTTLSNLEVE 288
                   ****9654333788888999999999********************99999987775 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 3.6e-05
                   EEEEE-GGGGHHHHHHHH.HH-TT.SHHHHHHHH.HHHHT----EE-ESS-SSS-EETT CS
  tRNA-synt_1g 182 ehlffklskfekklkewieeeeke.leenvkkivkewlkegLkdlaisrdldwGipvPg 239
                    +++ + ++++++  + +++ e +  +e  +k    w+++ ++d++isr+l wG +vP 
    EPX74271.1 472 PQWWVNQKEMANAAADAVRSGEIDiAPEVSRKEFIRWMEN-IQDWCISRQLWWGHRVPA 529
                   5677777778888888887777776666677778899999.****************94 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.00041
                   S-EEEE--EE.E--------------HHHHHHHH-HHH CS
  tRNA-synt_1g 313 kkvvaheylt.vegkKlSkSrgvvvkakealerldadl 349
                   k+v+ h  +   +g+K+SkS g+vv++ +++e ++ + 
    EPX74271.1 639 KRVFCHALVRdAQGRKMSKSLGNVVDPIDVIEGISLQS 676
                   5666666664279**************99999877655 PP

  == domain 4  score: -2.7 bits;  conditional E-value: 0.64
                   HH-HHHHHHHHHHHS-TTS-EEE CS
  tRNA-synt_1g 344 rldadllRYylaaeapekkDldf 366
                   ++ +d+lR+ l++ ++  +Dl++
    EPX74271.1 708 QCGTDALRFTLCSLTSGGRDLNL 730
                   5789************9999987 PP

  == domain 5  score: -1.0 bits;  conditional E-value: 0.19
                   ....EEE.EEEEEE-GGGGHHHHHHHH.HH-TTSHHHHHHHH.HHHHT----EE-ESS-SS....S-EET.TECCEEE-HHHHHH CS
  tRNA-synt_1g 173 gskpevketehlffklskfekklkewieeeekeleenvkkivkewlkegLkdlaisrdldw....GipvP.gaekkvlYVWldAl 252
                   g++  v+  + +f +l+   +++++++ee +    + ++ i + wl e L d+ i +  ++    G p   ++ k++lY  ld  
    EPX74271.1 770 GKESLVE--KWIFHRLNIAVDAMNKYMEEMN--FLQATSAIYQFWLYE-LCDVYIENS-KYlisdGTPTQqESAKQTLYTVLDTS 848
                   5555554..7889999999999999996666..778888888899998.999999743.22122355555677777888777765 PP

>> tRNA-synt_1_2  Leucyl-tRNA synthetase, Domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   1.4       2.5   7.5e+03      52      76 ..      36      60 ..      28      75 .. 0.63
   2 !   12.5   0.0   2.6e-05     0.079      11      51 ..     314     354 ..     310     360 .. 0.89
   3 !   26.4   0.0   1.4e-09   4.3e-06      86     144 ..     356     415 ..     351     428 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 2.5
  tRNA-synt_1_2 52 aekkkelaafieevkkkseserele 76
                    +k ++l+++ ++++ k+ +e++ +
     EPX74271.1 36 RQKAAKLEKYHAKLAAKKAKEESRK 60
                   5677788888888877776665433 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 2.6e-05
  tRNA-synt_1_2  11 eiefkveeseeklevfttrpdtlfGvtfvalapehplvekl 51 
                    +i ++ve+s+e++ + ttrp+tl G t +a+ p+ p  ++l
     EPX74271.1 314 SIAYEVEGSDERIIIATTRPETLLGDTAIAVHPQDPRYKHL 354
                    6999*****************************99977776 PP

  == domain 3  score: 26.4 bits;  conditional E-value: 1.4e-09
  tRNA-synt_1_2  86 glkaihPitgekipiwvany.vlmeygtgavmavPahdqrDfeFakkynlpikqvikped 144
                    g  + hP+ ++ +pi   +  v me+gtgav   Pahd +D+e  k++nl ++++++ ++
     EPX74271.1 356 GKSVKHPFCDRILPIICDDIaVDMEFGTGAVKITPAHDPNDYEVGKRHNLAFINILNDNG 415
                    77899**********99996366******************************9998654 PP

>> tRNA-synt_1e  tRNA synthetases class I (C) catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.0   0.00068         2      17     127 ..     141     322 ..     127     336 .. 0.76
   2 !   10.1   0.0   0.00012      0.37     235     277 ..     636     678 ..     614     689 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.00068
                   EBTTS--BHHHHHHHHHHHHHHHHHHHTT-EEEEEEEBB-........-SHHHHHHHHHTTS-.................................. CS
  tRNA-synt_1e  17 ptvydashlGhaRslvafDilrrilqalgYdvqfvqnvtD........idDkiikrareeeks.................................. 71 
                   p v  a h+Gha ++ + D l+r+ +++g  v f+  +          ++ k+ ++      +                                  
    EPX74271.1 141 PNVTGALHIGHALTIAIQDSLARWNRMKGKTVLFLGGFDHaglstqsvVEKKLWAEK-----Kqtrhdyarndfvdivwkwkeeyherikkqmsrlg 232
                   778999****************************98775411111111233333222.....13455699999999999999999999999999999 PP

                   ...................................HHHHHHHHHHHHHHHHHHTT----SB--BGGGGHHHHHHHHHHHHHTTSEEE-TTS CS
  tRNA-synt_1e  72 ...................................vkelaekfieefkkdleaLnvlkptleprvsekvdeiielvekliekgyaYavsdg 127
                                                       ++   ++ +++++ l++L+v + +++ r   kv+   +lve  +  ++aY+v+  
    EPX74271.1 233 gsfdwkreaftmdenltravvetfvrlhdekiiyrANR-LVNWCTALQTTLSNLEVENVEVTGRTEIKVPGYDHLVEVGVLTSIAYEVEGS 322
                   99999999999999999999999999998888874444.4468888999999999999999999999999999999988888888888754 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00012
                   S--EEEEEEE--EEETTBE--TTTT---BHHHHHTTS-HHHHH CS
  tRNA-synt_1e 235 kqlvkyflhnghlkiegekmsksLknfitikdvlkkfdprqlR 277
                    ++ + f h+ +   +g+kmsksL+n++   dv++  + + l 
    EPX74271.1 636 VPFKRVFCHALVRDAQGRKMSKSLGNVVDPIDVIEGISLQSLH 678
                   567788999999999*************999999887777765 PP

>> tRNA-synt_1c  tRNA synthetases class I (E and Q), catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.6   2.8       2.7   7.9e+03     100     130 ..      28      58 ..      26      76 .. 0.60
   2 ?   11.6   0.0   3.1e-05     0.093       6      32 ..     139     165 ..     135     176 .. 0.79

  Alignments for each domain:
  == domain 1  score: -4.6 bits;  conditional E-value: 2.7
                   THHHHHHHHCCSSHSS-TTTTS-HHHHHHHH CS
  tRNA-synt_1c 100 tkeeleeereeqeklgskerdrydeenlklf 130
                   t+ ele+er+++ kl++ + +   +++ + +
    EPX74271.1  28 TEKELERERQKAAKLEKYHAKLAAKKAKEES 58 
                   6789999999988777544444444333333 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 3.1e-05
                   E---SSSS-BHHHHHHHHHHHHHHHHT CS
  tRNA-synt_1c   6 faPePtGyLHiGhakaallnylfAknn 32 
                    +P+ tG LHiGha ++ +   +A+ n
    EPX74271.1 139 PPPNVTGALHIGHALTIAIQDSLARWN 165
                   59****************999999843 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (982 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1396  (0.0778627); expected 358.6 (0.02)
Passed bias filter:                      733  (0.0408835); expected 358.6 (0.02)
Passed Vit filter:                        71  (0.00396006); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.89u 0.34s 00:00:01.23 Elapsed: 00:00:00.52
# Mc/sec: 5684.16
//
Query:       EPX74272.1  [L=905]
Description: chitin synthase Chs2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.5e-53  179.9   0.1    5.8e-53  179.2   0.1    1.3  1  Chitin_synth_1   Chitin synthase
    1.6e-15   56.8   0.0    3.4e-15   55.7   0.0    1.6  1  Chitin_synth_1N  Chitin synthase N-terminal


Domain annotation for each model (and alignments):
>> Chitin_synth_1  Chitin synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  179.2   0.1   6.4e-57   5.8e-53       3     163 .]     240     400 ..     238     400 .. 0.99

  Alignments for each domain:
  == domain 1  score: 179.2 bits;  conditional E-value: 6.4e-57
  Chitin_synth_1   3 nEdkellarTLkgvmkNieelkkrkkskvwgkdsWkkivVcivsDGrekideetldvlaalgvyqegvakkkvngkevkahlfeyttqlsvdeel 97 
                     +Ed + +a TL++vm+N+++l+kr+ks+vwg ++Wk+++ civ DGr+++++++ld+l+++g+yq ++ k ++ngk+v ah++e+t+++svde+l
      EPX74272.1 240 QEDLASFALTLSSVMENVKYLTKRNKSRVWGVEGWKRVLTCIVLDGRNSVHRSILDLLSTIGAYQASISKGRINGKKVLAHMYEFTSTISVDEKL 334
                     79999****************************************************************************************** PP

  Chitin_synth_1  98 klkenekslvpvqllfclkeknakkinShrWlfnafarllqPevcvlldvGtkpgkkslyklwkaf 163
                     ++++++++++p+qll+clke++++  +S+rW+++++++l++P++c++ +vG+k++++s+y+ wk+f
      EPX74272.1 335 NITTRNDGNTPMQLLVCLKENESGTHDSQRWFLQGICSLVRPNICLFAKVGSKLETQSVYHAWKSF 400
                     ****************************************************************98 PP

>> Chitin_synth_1N  Chitin synthase N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.7   0.0   3.8e-19   3.4e-15       2      73 .]     165     237 ..     164     237 .. 0.95

  Alignments for each domain:
  == domain 1  score: 55.7 bits;  conditional E-value: 3.8e-19
  Chitin_synth_1N   2 kkvkLlngnlvldlpvpkkllkalpeee.keseEfthmRYtAvTcdPddftkegytLRqalygReteLlIviT 73 
                      ++v++++++lv+++p+p++l+++l +   ++ eE + +RYtAvT +P+d+++++ ++R+ l++R+++ +I++T
       EPX74272.1 165 QEVPIMHDSLVVECPCPSDLKHMLGSIVqTNPEESSSIRYTAVTSNPEDMMANELKVRTILFDRDIQAAICMT 237
                      68999********************666589*****************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (905 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       745  (0.0415528); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.30s 00:00:00.97 Elapsed: 00:00:00.45
# Mc/sec: 5984.19
//
Query:       EPX74273.1  [L=1146]
Description: SIN3 family co-repressor Pst3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.5e-36  124.5   5.4      2e-30  106.5   0.1    3.7  3  Sin3a_C         C-terminal domain of Sin3a protein
    2.4e-32  110.8   8.9    1.7e-14   53.6   0.1    4.3  4  PAH             Paired amphipathic helix repeat
    1.6e-23   82.6   0.7    4.1e-23   81.3   0.7    1.7  1  Sin3_corepress  Sin3 family co-repressor


Domain annotation for each model (and alignments):
>> Sin3a_C  C-terminal domain of Sin3a protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.1      0.15   8.9e+02      62      88 ..     114     151 ..      61     163 .. 0.67
   2 !   18.7   0.1     2e-07    0.0012       1      28 [.     843     870 ..     843     880 .. 0.85
   3 !  106.5   0.1   3.3e-34     2e-30      67     285 ..     877    1091 ..     870    1092 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.15
     Sin3a_C  62 e...........seeeeeeyYsqllelveklldGeidq 88 
                 +             +e+ e+Y+++le ++++   ++d 
  EPX74273.1 114 NdalsylelvkyYFSEKREVYNKFLEIMRDFKSQSLDT 151
                 0444444455455578999********99998888776 PP

  == domain 2  score: 18.7 bits;  conditional E-value: 2e-07
     Sin3a_C   1 FfaNttfYvflrlfqiLyeRLlkikqae 28 
                 Ff+N t+Yv++rl+ + y+RL++ik+  
  EPX74273.1 843 FFGNATMYVLFRLICVSYSRLEQIKKYI 870
                 9***********************7654 PP

  == domain 3  score: 106.5 bits;  conditional E-value: 3.3e-34
     Sin3a_C   67 eeeyYsqllelveklldGeidqsqfEdslRemfgikaYklfTldKliqalvkqlqtivsDekcqellelfekerskeettsqdeisyrkkaekll.k 162 
                  e+  Y+ +le +ek+l+G +  ++f + l ++ +   Y +  +++l++ +   ++ i+ D k  +ll lfe++ + + tt+++++ yr+ +e +l +
  EPX74273.1  877 ESINYDSVLETCEKYLKGALSGNEFHEYLQKLNNDACYMISSIERLLKVVFYRVHEILLDPKLGQLLLLFESDGAHSVTTAREQMIYRNHVETILaP 973 
                  5556********************************************************************************************* PP

     Sin3a_C  163 denlfriewkseskkltiqlldkddetldddeveaeerwkeYvesYvlveptegvereklkkvfLkRnlkaerkeeekkeeeeqekaekeeeaekel 259 
                  d ++f + w + +kkl+iq l + d t+++ + +  + + +Yv+sY+ ++ teg++  +++++fLkR+l+ ++++   +     +++++ ++  +e 
  EPX74273.1  974 DTKIFNMRWYPLEKKLCIQQLFSADLTIHKFD-DPAKAFMYYVDSYAISHITEGIDLMQVRMPFLKRSLQLISQKGYLAG----RESSSLHSLFNER 1065
                  ****************************9999.999*********************************66655544443....3333444555666 PP

     Sin3a_C  260 eveekleiriclnsyklvyvpgtedv 285 
                    +++l++ +++ +y ++++++te+v
  EPX74273.1 1066 FCKSNLQLFFSTDTYMIFFESNTENV 1091
                  667********************986 PP

>> PAH  Paired amphipathic helix repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.6   0.1   2.9e-18   1.7e-14       1      45 []     132     176 ..     132     176 .. 0.99
   2 !   52.9   0.3     5e-18     3e-14       1      45 []     273     317 ..     273     317 .. 0.98
   3 !    7.5   0.2   0.00075       4.5       4      34 ..     426     456 ..     424     466 .. 0.81
   4 ?   -3.4   0.0       1.9   1.1e+04       3      22 ..     881     900 ..     880     925 .. 0.71

  Alignments for each domain:
  == domain 1  score: 53.6 bits;  conditional E-value: 2.9e-18
         PAH   1 evYkeFLdiLhdyqkeqidskeVyeqVskLFhdhpdLlreFnqFL 45 
                 evY++FL+i++d+++++ d+ +V+ +V+ LF ++p+L+++Fn+FL
  EPX74273.1 132 EVYNKFLEIMRDFKSQSLDTLGVIDRVATLFNGYPQLIEGFNTFL 176
                 8*******************************************8 PP

  == domain 2  score: 52.9 bits;  conditional E-value: 5e-18
         PAH   1 evYkeFLdiLhdyqkeqidskeVyeqVskLFhdhpdLlreFnqFL 45 
                 e+Y eFL +L++yqk+ ++++eV ++Vs++F+d+pdLl+eF+ FL
  EPX74273.1 273 ETYMEFLGVLRTYQKAEKSIHEVRARVSEIFSDSPDLLDEFKLFL 317
                 79****************************************998 PP

  == domain 3  score: 7.5 bits;  conditional E-value: 0.00075
         PAH   4 keFLdiLhdyqkeqidskeVyeqVskLFhdh 34 
                 ++F ++Lh y+++  d++++    s L +++
  EPX74273.1 426 HKFMELLHLYREKLMDKTDLLNSFSRLVKND 456
                 79************9****999888887654 PP

  == domain 4  score: -3.4 bits;  conditional E-value: 1.9
         PAH   3 YkeFLdiLhdyqkeqidske 22 
                 Y++ L+++ +y k   + +e
  EPX74273.1 881 YDSVLETCEKYLKGALSGNE 900
                 88888888888766554444 PP

>> Sin3_corepress  Sin3 family co-repressor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.3   0.7   6.9e-27   4.1e-23       2      95 ..     492     583 ..     491     586 .. 0.90

  Alignments for each domain:
  == domain 1  score: 81.3 bits;  conditional E-value: 6.9e-27
  Sin3_corepress   2 rlgpsYrlLpksyqqpkcsgrdelekevLNdewvsvptwasedsgsfkasrknqyeealfrcEderyelDmvieanrstiklleelakkiesms 95 
                     ++g sYr++p++ +++ cs rd+l+++vLNde++ v+   +  +   + + +nqy +al  +Ederye+D ++++n++tikll el+++++  +
      EPX74273.1 492 SVGYSYRRIPQERKNEICSSRDALCNSVLNDEYILVAPKLAGIK--NVKHSENQYLQALQLVEDERYEYDRILSVNQRTIKLLAELCEAVNDET 583
                     6899********************************97744443..4677**************************************999765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1146 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       749  (0.0417759); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.73u 0.28s 00:00:01.01 Elapsed: 00:00:00.43
# Mc/sec: 8085.14
//
Query:       EPX74274.1  [L=537]
Description: RSC complex subunit Rsc4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.1e-42  144.0   3.8    2.1e-20   72.5   0.8    2.5  2  Bromodomain  Bromodomain


Domain annotation for each model (and alignments):
>> Bromodomain  Bromodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.7   0.1   2.1e-24   3.9e-20      10      82 ..      31     103 ..      20     105 .. 0.91
   2 !   72.5   0.8   1.2e-24   2.1e-20      13      81 ..     166     234 ..     148     237 .. 0.92

  Alignments for each domain:
  == domain 1  score: 71.7 bits;  conditional E-value: 2.1e-24
                  TTTCGGGGCSTT-GCCSTTHHHH.SS---HHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHSHTTSHHHHHH CS
  Bromodomain  10 ehklaepFlepvdpeefpdyyavikkPldLstIkkklesnkYksladfeadlkllfsNarkyngegsviyela 82 
                   ++++++F+e ++++ fpdyy++i++P+  +t+++k+++++Y s+ +f++dl+l+++Na++yn +gs +ye+a
   EPX74274.1  31 GNPFDDVFEELPSKKYFPDYYQIITEPIAYKTMRSKARHGQYISMGEFYDDLRLMVNNAKTYNAPGSFVYECA 103
                  456999*****************************************************************98 PP

  == domain 2  score: 72.5 bits;  conditional E-value: 1.2e-24
                  CGGGGCSTT-GCCSTTHHHH.SS---HHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHSHTTSHHHHH CS
  Bromodomain  13 laepFlepvdpeefpdyyavikkPldLstIkkklesnkYksladfeadlkllfsNarkyngegsviyel 81 
                  l ++F++ ++++ +pdyy++ik P+ +++++k++++n+Y+s++dfe dl++++ Na++yn+ gs +ye+
   EPX74274.1 166 LIDMFIDLPSKRLYPDYYDIIKTPMTIKMMEKRVKKNEYSSIKDFESDLNQMYLNAQTYNEAGSFVYED 234
                  6789***************************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (537 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       799  (0.0445647); expected 358.6 (0.02)
Passed bias filter:                      474  (0.0264376); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.38
# Mc/sec: 4291.11
//
Query:       EPX74275.1  [L=111]
Description: cyclin-dependent protein kinase regulatory subunit Suc1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.5e-33  113.7   0.4    4.8e-33  113.2   0.4    1.2  1  CKS       Cyclin-dependent kinase regulatory subunit


Domain annotation for each model (and alignments):
>> CKS  Cyclin-dependent kinase regulatory subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.2   0.4   2.7e-37   4.8e-33       1      68 []      25     101 ..      25     101 .. 0.96

  Alignments for each domain:
  == domain 1  score: 113.2 bits;  conditional E-value: 2.7e-37
         CKS   1 ieYSdkyeddeyeYRhViLpkellkkipks.........rlLsekewraLgIqqskgWehyeihkpephiLlfrrpk 68 
                 i+YS++y ddeyeYRhV+Lpk +lk ip +         r+L+e+ewr+LgI+qs+gWe ye+h pephiLlf+r+k
  EPX74275.1  25 IHYSPRYADDEYEYRHVMLPKAMLKVIPTDyfnpetgtlRILHEEEWRGLGITQSLGWEMYEVHVPEPHILLFKREK 101
                 8****************************7777788889************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       248  (0.0138323); expected 358.6 (0.02)
Passed bias filter:                      234  (0.0130515); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.27s 00:00:00.66 Elapsed: 00:00:00.44
# Mc/sec: 762.38
//
Query:       EPX74276.1  [L=301]
Description: F1-ATPase gamma subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-72  244.6   7.6    1.8e-72  244.4   7.6    1.0  1  ATP-synt  ATP synthase
  ------ inclusion threshold ------
       0.18   11.7   2.5        0.9    9.4   0.1    2.3  2  EspA      EspA-like secreted protein


Domain annotation for each model (and alignments):
>> ATP-synt  ATP synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  244.4   7.6     2e-76   1.8e-72       1     279 []      33     300 ..      33     300 .. 0.90

  Alignments for each domain:
  == domain 1  score: 244.4 bits;  conditional E-value: 2e-76
                 THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHCEHHHHTTT..SSG.S.SSEEEEEEE--SSSSSTTHHHHHHHHH.HH CS
    ATP-synt   1 slkeikrRiksvkstkkItkAmkmVaaaklrkaqealeaarpyaekleevlealakreeeekhpllkeeekkvllivitSDrGLcGgfNsnvikka.ek 98 
                 +lke++ R+ks+++++kItk++k+Va +kl++aq+a+e a++y++  +e++e+  ++      p    +e k+lli+++SD+GLcGg++s++ + + ++
  EPX74276.1  33 TLKELEIRLKSIRNIEKITKTIKTVAQTKLNRAQRAMELAKKYQTVSNEFFEEAGTQ-----AP----KEGKTLLIACSSDKGLCGGIHSSISRLVrKE 122
                 69***************************************************9332.....12....46799***********************666 PP

                 HHHHHHTTTETEEEEESHHHHHHH.HH.SS.EHHTTCE-TS.S--HHHHHHHHHHHHSHHHTTSBSEEEEEEEEECCTSEEEEEEEEESST...HCS.. CS
    ATP-synt  99 lieelkkegevklvvvGkkgreyf.kr.kvevqleftgvsk.kptfeeaseiaeeildlyeegeideveivynkfksaisqeptvekllplekeeekke 194
                 +i+ +  e++++l+v+G+k+r+++ +     + l+f +++  +p++eea +i+++il+  +++e+d++ ivyn+f sa+s+e+++++l+  ++   +++
  EPX74276.1 123 MIDPNV-EQNTSLCVLGEKVRSQLyRYyPGSLYLTFAHIGGaSPSYEEALQISSNILE--NANEFDRIVIVYNRFASAVSFETVMKNLYTRQSI--AES 216
                 666633.33569**********99533444566667888888***************9..89****************************6444..678 PP

                 SSTSEESS.HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT- CS
    ATP-synt 195 kseyefepdeeevleellpeylasliyrallesaasEqaaRmtaMdnAtknakelidkltleyNraRQaaITqELieIvsGaeAL 279
                 ++ + +e + +ev + l+++ ++++i+ a++e+++sE ++R++aM+nA+k a+e+i+k++  yNr+RQa+IT+ELi+Iv+Ga+AL
  EPX74276.1 217 PNLFAYEAS-SEVHQPLMEYAFTNAIFAAMAEAHCSEMSSRRNAMENASKSAGEMINKFSTIYNRQRQASITNELIDIVTGANAL 300
                 888899998.9*************************************************************************8 PP

>> EspA  EspA-like secreted protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.1    0.0001       0.9      32      72 ..      42      82 ..      16      96 .. 0.85
   2 ?    2.0   0.4     0.019   1.7e+02      42      74 ..     240     272 ..     197     295 .. 0.75

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0001
        EspA 32 eaittleevmllltelsnakfaqmskkaevardaqekaNem 72
                + i  +e++ + ++ +++ k ++ ++++e a++ q  +Ne 
  EPX74276.1 42 KSIRNIEKITKTIKTVAQTKLNRAQRAMELAKKYQTVSNEF 82
                678999*********************************85 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.019
        EspA  42 llltelsnakfaqmskkaevardaqekaNemda 74 
                  ++ ++++a+ ++ms++ +   +a + a em +
  EPX74276.1 240 AIFAAMAEAHCSEMSSRRNAMENASKSAGEMIN 272
                 578899999999999887777777666666644 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (301 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1177  (0.0656478); expected 358.6 (0.02)
Passed bias filter:                      634  (0.0353617); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.29s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2145.15
//
Query:       EPX74277.1  [L=555]
Description: hypothetical protein SOCG_03488 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.4e-36  124.3  29.8      1e-35  123.8  29.8    1.1  1  Glyco_transf_22  Alg9-like mannosyltransferase family
    0.00018   21.5   0.0    0.00033   20.6   0.0    1.4  1  Inhibitor_I78    Peptidase inhibitor I78 family


Domain annotation for each model (and alignments):
>> Glyco_transf_22  Alg9-like mannosyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.8  29.8   1.1e-39     1e-35      14     386 ..      32     389 ..      17     410 .. 0.81

  Alignments for each domain:
  == domain 1  score: 123.8 bits;  conditional E-value: 1.1e-39
  Glyco_transf_22  14 alltqtsf.dpDEffqslEvahklvfgkgtltWEyspkyg.i.RSylfllllalpyrllaelvadskiavlyapRlllallsalidyylfravc 104
                      a++t   + +++E f ++ ++   +++ g++ +++++  g + RS ++ l++al+ +l a     ++   l+a+R ++++ls+ + + +++a+ 
       EPX74277.1  32 AFITP--YtKVEESFSMQAIHDIQTYKLGLSKYDHQKFPGsVkRSFIPSLFIALISYLPA-----KHFSSLLAVRWTIGFLSCESFMAVAKALR 118
                      33333..338***********999***********6666542477777777777765544.....5566799********************** PP

  Glyco_transf_22 105 rkygseiakialllslsswglfvfstrtfsnslemlltsialyllsellsrenksssnekylvavlliavlavliRptsallwlplvlflllrl 198
                      +++g      ++l+   +++l+++++r ++n+  +++t  al +l+           n ky + ++++a++av+iR +  ll+++l+l+ll   
       EPX74277.1 119 KRFGFFAGISFILITAGQFHLIYYMSRPLPNVYGLMFTNAALGFLL-----------NGKYYKSISVLAFAAVVIRSEIFLLLSVLSLSLL--- 198
                      **********************************************...........68999************************99999... PP

  Glyco_transf_22 199 vkkrsktflfliialvllvlllvlvlviliDslfYgkfvftplnflkyNvlsnlsslyGvhPwyfYllqnlpnilgvlllavllgllvllsrkv 292
                       ++r++++  +++++++l+ + +l  +++iDs f+g + +++l+ + +Nvl+ +ss +G+ P+y+Y+     ++++++l+++ l+ + +  ++ 
       EPX74277.1 199 -GQRRIHI-GRLFLIGVLSSVTALSFTVFIDSWFWGTWCWPELQAFVFNVLEGKSSEWGTSPFYYYFKRIPWIMMNPTLFVFGLVSFLT--VRS 288
                      .7777888.7899999999999999******************************************9887777787777766666655..455 PP

  Glyco_transf_22 293 srlllllltilltLlvysllpHKElRFllpvlPlillsaavlltrls......resakvskk........lsllvllllfnvvlalllglvhqa 372
                      sr   ll+  + +++++s+l+HKE RF+ +++P i  s+av+++rl       +                +++++ + ++  + +lll ++  a
       EPX74277.1 289 SR--ILLYVPFAFVFIFSFLKHKEWRFISYIIPWIDSSCAVGFSRLMqlngqnKM------NnnirklaiIAIFFGFSFGIFASSLLLKVFTFA 374
                      65..788889999*********************************866554322......123433455555555555555666666665544 PP

  Glyco_transf_22 373 gvillv.evmselee 386
                       +  ++ e+++++++
       EPX74277.1 375 YPGGVAlEKLHSMNN 389
                      333333355554444 PP

>> Inhibitor_I78  Peptidase inhibitor I78 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   3.7e-08   0.00033      29      60 ..     519     550 ..     498     555 .] 0.78

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 3.7e-08
  Inhibitor_I78  29 dsvRvlkPGqvvtleynpaRlniivegaGkis 60 
                    +  R+lkPG ++t +y   Rln  + ++G + 
     EPX74277.1 519 EVYRILKPGSIMTRDYREERLNFFITEDGILD 550
                    457********************999999665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (555 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       577  (0.0321825); expected 358.6 (0.02)
Passed bias filter:                      250  (0.0139439); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 4073.17
//
Query:       EPX74278.1  [L=414]
Description: DNAJ domain-containing protein Mas5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.4e-39  134.8   0.1    3.6e-39  134.2   0.1    1.3  1  DnaJ_C          DnaJ C terminal domain
    2.9e-25   88.2   1.6    4.7e-25   87.5   1.6    1.3  1  DnaJ            DnaJ domain
    4.5e-16   59.0  15.9    7.8e-16   58.2  15.9    1.4  1  DnaJ_CXXCXGXG   DnaJ central domain
  ------ inclusion threshold ------
       0.13   12.3  10.7       0.65   10.0   2.4    2.3  2  HypA            Hydrogenase/urease nickel incorporation, meta
        0.2   11.6  16.3       0.38   10.7   3.0    3.4  4  Anti-TRAP       Tryptophan RNA-binding attenuator protein inh
       0.41   10.6   8.3          6    6.9   8.3    2.2  1  zinc-ribbons_6  zinc-ribbons
        2.3    8.3  10.7        1.2    9.2   0.7    2.6  2  Zn_Tnp_IS1595   Transposase zinc-ribbon domain
        4.5    7.6   6.6         30    5.0   0.1    3.7  4  zinc_ribbon_9   zinc-ribbon
          5    7.2   5.9         14    5.9   0.5    2.2  2  DUF2614         Zinc-ribbon containing domain
        8.4    6.7  19.7        1.8    8.8   0.8    4.2  4  DUF5351         Family of unknown function (DUF5351)


Domain annotation for each model (and alignments):
>> DnaJ_C  DnaJ C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.2   0.1     2e-42   3.6e-39       2     148 .]     117     336 ..     116     336 .. 0.95

  Alignments for each domain:
  == domain 1  score: 134.2 bits;  conditional E-value: 2e-42
                 EEEEEE-HHHHHH-.EEE.EEEE..........................................................................TE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx...................................................................xxxxxx RF
      DnaJ_C   2 eveleisleelykGktkkikikrnvi...................................................................kkekkt 33 
                  ++++++le+ly+Gkt k++++++vi                                                                   ++++k+
  EPX74278.1 117 VHTIKVTLEDLYRGKTSKLALQKKVIcpkcsgrggkegavrtcqscsgsgvkfitramgpmiqrmqmtcpdcdgegesirsedrckecngakvVSQRKI 215
                 689*****************************************************************************************988999* PP

                 EEEEE-TT--TT-EEEETT-SSSS...S---EEEEEEE---SS-EEETTEEEEEEEEEHHHHHHTEEEEEE-S.S-EEEE.....EE--TT-EEEETT- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxx.....xxxxxxxxxxxxxx RF
      DnaJ_C  34 levkipaGikdgqkirlegeGdeeg.gepGDlivtikvkphpvFkrkgndlyveveislaeallGgklevptl.dgkvkl.....kitqpgevlrikgk 125
                 l+v++++G+++gqk+++++eG++ +   pGD+i++i+vk+hp+Fkr g++l++e++++l  al Gg++ ++ l d+  ++     + ++p+e ++i+g+
  EPX74278.1 216 LTVNVEKGMHNGQKVVFKEEGEQAPgIIPGDVIFVIDVKEHPRFKRSGDHLFYEAHVDLLSALAGGEIVIEHLdDRYLTVpiipgECIRPNELKVIPGQ 314
                 **********************8888***********************************************54445555455555************ PP

                 S-EET...TEE--EEEEEEEE-- CS
                 xxxxxxxxxxxxxxxxxxxxxxx RF
      DnaJ_C 126 GmpklkkpgkrGdlyvevkvefP 148
                 Gm +++ +++ G+ly++++v+fP
  EPX74278.1 315 GMLSQR-HHQPGNLYIRFTVDFP 336
                 ***997.***************9 PP

>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.5   1.6   2.6e-28   4.7e-25       2      63 .]       7      65 ..       6      65 .. 0.98

  Alignments for each domain:
  == domain 1  score: 87.5 bits;  conditional E-value: 2.6e-28
                HHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHHHHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ  2 yYeiLgvskdasedeIkkaYrklalkyHPDknpkdpeaeekFkeineAyevLsdpekRkqYD 63
                +Ye Lgv+++as++++kkaYrklalkyHPDkn   p+a +kFkei++Aye+Lsd++kR+ YD
  EPX74278.1  7 LYETLGVDPSASQNDLKKAYRKLALKYHPDKN---PNAGDKFKEISRAYEILSDEDKRSTYD 65
                8*******************************...**************************9 PP

>> DnaJ_CXXCXGXG  DnaJ central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.2  15.9   4.3e-19   7.8e-16       1      66 [.     143     207 ..     143     208 .. 0.91

  Alignments for each domain:
  == domain 1  score: 58.2 bits;  conditional E-value: 4.3e-19
  DnaJ_CXXCXGXG   1 CkkCkGsgakkgkkktCktCkGsGvvreeqktlgpfvqqsqstCpeCeGtGkvikekdkCkkCkGk 66 
                    C+kC+G+g k+g+++tC++C+GsGv+  ++  +gp++q++q+tCp+C+G+G+ i+++d+Ck+C+G 
     EPX74278.1 143 CPKCSGRGGKEGAVRTCQSCSGSGVKFITR-AMGPMIQRMQMTCPDCDGEGESIRSEDRCKECNGA 207
                    ************************544443.499*******************************7 PP

>> HypA  Hydrogenase/urease nickel incorporation, metallochaperone, hypA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   1.2    0.0023       4.1      68     101 ..     138     171 ..     122     183 .. 0.82
   2 ?   10.0   2.4   0.00037      0.65      67      97 ..     179     209 ..     174     221 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0023
                 --EEEETTTS-EEECHHHHHS-TTTSSS-EEEEE CS
        HypA  68 pvkvrCreCgkefeleekalrCpkCgsadveivs 101
                 + kv C +C+ ++ +e +  +C++C++++v++++
  EPX74278.1 138 QKKVICPKCSGRGGKEGAVRTCQSCSGSGVKFIT 171
                 45799*****99998876668******9999765 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00037
                 E--EEEETTTS-EEECHHHHHS-TTTSSS-E CS
        HypA  67 vpvkvrCreCgkefeleekalrCpkCgsadv 97 
                 ++++++C +C+ e+e+ +++ rC++C++a+v
  EPX74278.1 179 QRMQMTCPDCDGEGESIRSEDRCKECNGAKV 209
                 57899**********7766779*****9876 PP

>> Anti-TRAP  Tryptophan RNA-binding attenuator protein inhibitory protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   4.8    0.0035       6.3      12      41 ..     142     167 ..     138     178 .. 0.82
   2 ?   10.7   3.0   0.00021      0.38      12      40 ..     158     192 ..     153     199 .. 0.82
   3 ?    8.2   3.4    0.0013       2.3       9      42 ..     181     210 ..     176     214 .. 0.78
   4 ?    2.3   0.2     0.093   1.7e+02      10      19 ..     198     207 ..     195     237 .. 0.77

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0035
                 E-TTTTTTSEETTE......E-TTTTTSSE CS
   Anti-TRAP  12 kCdaCngsGkiepeeprasleCPkCsGkgl 41 
                  C++C g G  e++       C  CsG g+
  EPX74278.1 142 ICPKCSGRGGKEGA----VRTCQSCSGSGV 167
                 6********99999....668999999887 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00021
                 E-TTTTTTSEETTE............E-TTTTTSS CS
   Anti-TRAP  12 kCdaCngsGkiepe......eprasleCPkCsGkg 40 
                 +C+ C gsG    +       +r  + CP+C G+g
  EPX74278.1 158 TCQSCSGSGVKFITramgpmIQRMQMTCPDCDGEG 192
                 8********765444465567899*********97 PP

  == domain 3  score: 8.2 bits;  conditional E-value: 0.0013
                 CEEE-TTTTTTSEETTE......E-TTTTTSSEE CS
   Anti-TRAP   9 LEtkCdaCngsGkiepeeprasleCPkCsGkgli 42 
                 +  +C+ C+g G+    e      C +C+G +++
  EPX74278.1 181 MQMTCPDCDGEGESIRSE----DRCKECNGAKVV 210
                 5679******99865443....4699****9997 PP

  == domain 4  score: 2.3 bits;  conditional E-value: 0.093
                 EEE-TTTTTT CS
   Anti-TRAP  10 EtkCdaCngs 19 
                 E  C++Cng+
  EPX74278.1 198 EDRCKECNGA 207
                 5567777665 PP

>> zinc-ribbons_6  zinc-ribbons
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   8.3    0.0033         6       2      56 ..     142     205 ..     141     215 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0033
                     --SSS-S--EE-SSEEE-TTT--.............EEEEEEE-SSS-S---EEEETTEEEE--TTTT CS
  zinc-ribbons_6   2 kCpeCqqelekrgeqyhCeaCqe.............dlkkealCpeCeqelevlkaCgavdyfCnkcn 56 
                     +Cp+C     k+g+  +C++C+                +++ +Cp+C+ e e ++        C++cn
      EPX74278.1 142 ICPKCSGRGGKEGAVRTCQSCSGsgvkfitramgpmIQRMQMTCPDCDGEGESIRSEDR----CKECN 205
                     6************99******9999999999999977788999****988777765333....55555 PP

>> Zn_Tnp_IS1595  Transposase zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   3.7     0.065   1.2e+02      17      44 ..     139     163 ..     133     165 .. 0.78
   2 ?    9.2   0.7   0.00067       1.2      19      44 ..     183     205 ..     177     207 .. 0.91

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.065
  Zn_Tnp_IS1595  17 ngfvCPhCgsr..kayriktrglfqCkeCr 44 
                     +++CP+C +r  k   ++t     C++C+
     EPX74278.1 139 KKVICPKCSGRggKEGAVRT-----CQSCS 163
                    5689*****99887777777.....88885 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00067
  Zn_Tnp_IS1595  19 fvCPhCgsr.kayriktrglfqCkeCr 44 
                     +CP C ++ +++r ++    +CkeC+
     EPX74278.1 183 MTCPDCDGEgESIRSED----RCKECN 205
                    68***************....9****6 PP

>> zinc_ribbon_9  zinc-ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0     0.051        92      21      29 ..     140     148 ..     132     150 .. 0.79
   2 ?   -1.5   0.1       1.8   3.2e+03      22      29 ..     156     164 ..     152     167 .. 0.73
   3 ?    5.0   0.1     0.017        30      22      29 ..     183     190 ..     173     192 .. 0.77
   4 ?   -0.3   0.1      0.75   1.3e+03      19      29 ..     197     206 ..     193     209 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.051
  zinc_ribbon_9  21 dvlCPhCgg 29 
                     v+CP C g
     EPX74278.1 140 KVICPKCSG 148
                    468****87 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 1.8
  zinc_ribbon_9  22 v.lCPhCgg 29 
                    v +C +C g
     EPX74278.1 156 VrTCQSCSG 164
                    448****76 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.017
  zinc_ribbon_9  22 vlCPhCgg 29 
                     +CP+C+g
     EPX74278.1 183 MTCPDCDG 190
                    48****98 PP

  == domain 4  score: -0.3 bits;  conditional E-value: 0.75
  zinc_ribbon_9  19 dsdvlCPhCgg 29 
                    ++d  C +C+g
     EPX74278.1 197 SEDR-CKECNG 206
                    5677.****99 PP

>> DUF2614  Zinc-ribbon containing domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.6     0.029        52      61      90 ..     132     163 ..     116     168 .. 0.79
   2 ?    5.9   0.5    0.0076        14      64      91 ..     179     206 ..     165     215 .. 0.87

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.029
     DUF2614  61 lstkavq..vvcpeceketkvlGrvdlcmhcd 90 
                 +s  a+q  v+cp+c  +    G v  c  c+
  EPX74278.1 132 TSKLALQkkVICPKCSGRGGKEGAVRTCQSCS 163
                 5555553339******999999******9996 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0076
     DUF2614  64 kavqvvcpeceketkvlGrvdlcmhcde 91 
                 + +q++cp+c+ e   +   d c  c+ 
  EPX74278.1 179 QRMQMTCPDCDGEGESIRSEDRCKECNG 206
                 45799*********************96 PP

>> DUF5351  Family of unknown function (DUF5351)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.9      0.09   1.6e+02      20      27 ..     143     150 ..     142     152 .. 0.78
   2 ?    8.8   0.8   0.00098       1.8      19      28 ..     158     167 ..     154     168 .. 0.87
   3 ?    5.6   0.6      0.01        18      19      28 ..     184     193 ..     183     194 .. 0.90
   4 ?    1.1   0.2      0.25   4.5e+02      20      26 ..     201     207 ..     197     209 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.09
     DUF5351  20 CesCeGtg 27 
                 C++C+G g
  EPX74278.1 143 CPKCSGRG 150
                 88888887 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00098
     DUF5351  19 TCesCeGtgk 28 
                 TC+sC+G+g+
  EPX74278.1 158 TCQSCSGSGV 167
                 ********97 PP

  == domain 3  score: 5.6 bits;  conditional E-value: 0.01
     DUF5351  19 TCesCeGtgk 28 
                 TC+ C G+g+
  EPX74278.1 184 TCPDCDGEGE 193
                 9******997 PP

  == domain 4  score: 1.1 bits;  conditional E-value: 0.25
     DUF5351  20 CesCeGt 26 
                 C++C+G+
  EPX74278.1 201 CKECNGA 207
                 *****97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (414 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       677  (0.0377601); expected 358.6 (0.02)
Passed bias filter:                      506  (0.0282224); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.53u 0.22s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3130.78
//
Query:       EPX74279.1  [L=324]
Description: mRNA processing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      6e-34  117.5   1.3    6.8e-34  117.3   1.3    1.0  1  HECT_2    HECT-like Ubiquitin-conjugating enzyme (E2)-binding
  ------ inclusion threshold ------
      0.068   13.1   0.0       0.11   12.3   0.0    1.3  1  LPD15     Large polyvalent-protein-associated domain 15


Domain annotation for each model (and alignments):
>> HECT_2  HECT-like Ubiquitin-conjugating enzyme (E2)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.3   1.3   7.6e-38   6.8e-34      98     376 .]      58     318 ..      11     318 .. 0.84

  Alignments for each domain:
  == domain 1  score: 117.3 bits;  conditional E-value: 7.6e-38
      HECT_2  98 s........ekevpWsakdlsa..etslrCrsCknvllksrkikrwkdLPSenwaemmdfWhCHkpdehedsedenaatkgygasnklspqegdglvdl 186
                 +        + +vpW+  d  +  e  ++Cr C+ +l +   +   +dLPS+nw+e+md W CH + + +        +k  g   ++ p+++  + ++
  EPX74279.1  58 RcppriqnfDIKVPWKGLDFDSnlEQVVQCRYCSGKLAS---FFSCRDLPSANWQELMDCWACHVDFPAAL-------AKNGG-MPSFAPTKDMSYSGI 145
                 2455555566679*********76699**********87...66678********************4333.......33323.358************ PP

      HECT_2 187 tsfllaesdcqglklseetkpkkeeslsCkrCkatlGeeds..aaegvkLfkwnvslqpsesseskeesyplesivaaqLleliersgsrkflihseds 283
                 +++ll+ +++++ +      +k+++  +C +C+ +lG+ d+    e+v+L k ++ ++ +           ++ +v+++Ll l e +++ kf+++ + +
  EPX74279.1 146 SFLLLHPNSLENSQSY----EKDSSMYHCPSCQEQLGIQDKqdVPESVRLDKSCIMINGNR--------VHPSYVVTSELLTLRELNAVHKFCLTDQCN 232
                 ************6665....99*******************987789***********774........56789************************9 PP

      HECT_2 284 kekkglllwvfnpdlrvs....ssssssssleaqramKvlYkdeieeedaeklldesdssveelelpeeiieellevLeesnellPesaRkfkewkv 376
                      l++w f+p l v+    ++ ++s  +++   +K lY ++ +++        +  + ++++l ++++ e++  Le +++++P+sa+kf++w v
  EPX74279.1 233 ----TLYIWCFTPYLPVTffnsPNITASFPQSPVATIKTLYCYDPPDN-------LQGDDWQDITLTPSVFLEIKHLLELTTQSFPSSAQKFQHWYV 318
                 ....**************98776666778889**********777662.......446799**********************************87 PP

>> LPD15  Large polyvalent-protein-associated domain 15
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   1.3e-05      0.11      40      96 ..     174     234 ..     163     237 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.3e-05
       LPD15  40 ddtleeedlkrlreikkaDdkAvvvnGkys....gnlgedmtleelaaairyhyeniqnni 96 
                 +++l  +d++++ e  + D++ +++nG++        +e +tl+el a  ++ + +++n +
  EPX74279.1 174 QEQLGIQDKQDVPESVRLDKSCIMINGNRVhpsyVVTSELLTLRELNAVHKFCLTDQCNTL 234
                 5667889**********************87754455667899999998888887777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (324 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       620  (0.0345808); expected 358.6 (0.02)
Passed bias filter:                      481  (0.026828); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 2526.15
//
Query:       EPX74280.1  [L=323]
Description: NST UDP-N-acetylglucosamine transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-94  316.9  20.5    1.4e-94  316.7  20.5    1.0  1  UAA             UAA transporter family
     0.0083   16.3  29.9      0.018   15.2  11.3    2.7  2  EamA            EamA-like transporter family
  ------ inclusion threshold ------
      0.011   14.9  13.7      0.026   13.7  13.9    1.6  1  Nuc_sug_transp  Nucleotide-sugar transporter


Domain annotation for each model (and alignments):
>> UAA  UAA transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  316.7  20.5   2.3e-98   1.4e-94       3     301 ..       3     306 ..       1     307 [. 0.95

  Alignments for each domain:
  == domain 1  score: 316.7 bits;  conditional E-value: 2.3e-98
         UAA   3 llavslvfvgccsnvvllElivkeepkafgnlltfvqflfvalegllesid....ilkkrkiPlktYvilvalffitsvlnnealkydisvPvhiifrs 97 
                 l a+s++f+gccs +++lE iv+e pk+ g l+tf+qf+f+++egl+  +      lk +++P k+++ +v+lff ++vlnn al++d+svPvhii+rs
  EPX74280.1   3 LGALSFIFGGCCSTAYTLEAIVREYPKS-GLLITFSQFVFITIEGLVYFLLynpsALKSPNVPRKRWMYIVFLFFSINVLNNVALGFDVSVPVHIILRS 100
                 5689*******************999**.*****************9998865545******************************************* PP

         UAA  98 sklipvmilGililgkrYsllqylsvllltlGviiftllsakdkkedskeslnkfllGiallvlallldavlglvqeklykkygkhskealfyshllsl 196
                 s+ +++m +G+++++k+Y++lq++sv++lt+Gv+i  l +a+d  + + +s+++f++G+++l++++ll a++gl+ e +ykky+ +++e+lfy+h++s+
  EPX74280.1 101 SGPLTTMSVGWMLANKKYTILQMISVVFLTIGVVISVLGNANDI-HVHMSSTTNFTIGFTILMVTQLLGAFMGLLLEDTYKKYNASWRESLFYTHAFSI 198
                 *******************************************9.888999999********************************************* PP

         UAA 197 plflllqgellsavkflsesedval...lslpsklfylllnvltqyvcikgVlilisefgaltvtlvltlRKfvslllSillFknpltlqhlvgtllVf 292
                 p+fl l g++++++ +l++ ++ +    + +p   +y++ln+l+qyvc++gV+ l s+++altvt++l++RKfvsl+lSillF+n l+   ++g+ lVf
  EPX74280.1 199 PFFLPLLGSIRRQWMLLFTDSKSSNlyfFGMPPAFWYICLNTLAQYVCVRGVNSLGSQSSALTVTIILNIRKFVSLCLSILLFGNRLSGAVVLGACLVF 297
                 **************999765554443559********************************************************************** PP

         UAA 293 lglllysyv 301
                 ++ + y+y+
  EPX74280.1 298 GSSATYVYS 306
                 *****9996 PP

>> EamA  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2  11.3   3.1e-06     0.018       3     136 ..       4     137 ..       2     138 .. 0.72
   2 !    6.4  10.5    0.0015       9.2      20     132 ..     174     300 ..     155     305 .. 0.63

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 3.1e-06
        EamA   3 gillallaalfwaiyfvlskillrkv..spltltfvrfliagi.llliiallkegkl..aklslkdwllllllgllgtvlafllffyalk.ktsasnas 95 
                 g+l ++ + +++ +y++ +  ++r++  s l +tf +f++ +i  l+ ++l++ + l  ++ ++k w ++++l +      ++l + al  ++s+ +  
  EPX74280.1   4 GALSFIFGGCCSTAYTLEA--IVREYpkSGLLITFSQFVFITIeGLVYFLLYNPSALksPNVPRKRWMYIVFLFF----SINVLNNVALGfDVSVPVHI 96 
                 5555555555555555544..677774455699999999777745566666666666557777777777655554....44445555555279999*** PP

        EamA  96 litslePvftlilsvlllgekltlkqllgivlillGvllil 136
                 ++ s  P+ t+  ++ l ++k t++q++++v+  +Gv++ +
  EPX74280.1  97 ILRSSGPLTTMSVGWMLANKKYTILQMISVVFLTIGVVISV 137
                 *************************************9876 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0015
        EamA  20 lskillrkvspl..tltfvrfliagilllii.........allkegklaklslkdwlll.lllgllgtvlafllffyalkktsas....naslitsleP 102
                 l   +++k++    + +f++  ++  ++l++         +l++++k    +l  +    ++  +  ++la+++ + ++++++++    ++++i+++  
  EPX74280.1 174 LLEDTYKKYNASwrESLFYTHAFSIPFFLPLlgsirrqwmLLFTDSKS--SNLYFFGMPpAFWYICLNTLAQYVCVRGVNSLGSQssalTVTIILNIRK 270
                 555555555554445667777777777777744444433333333333..333333333344444445555555555555555445555********** PP

        EamA 103 vftlilsvlllgekltlkqllgivlillGv 132
                  ++l+ls+ll+g +l+   +lg++l++ + 
  EPX74280.1 271 FVSLCLSILLFGNRLSGAVVLGACLVFGSS 300
                 **************************9876 PP

>> Nuc_sug_transp  Nucleotide-sugar transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7  13.9   4.4e-06     0.026     121     314 ..     104     305 ..      68     306 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 4.4e-06
  Nuc_sug_transp 121 lttalfsvllLkrklskkqWlslllLvaGvalvqlkqkeseesekaaaaakeensvlGliavlaacllsgfaGvYfekiLkdsnvslWirni.ql 214
                     ltt  +  +l ++k ++ q +s+++L++Gv++  l +++  +     +++++ n  +G++ ++++ ll +f G+ +e   k+ n+s W   +   
      EPX74280.1 104 LTTMSVGWMLANKKYTILQMISVVFLTIGVVISVLGNANDIH----VHMSSTTNFTIGFTILMVTQLLGAFMGLLLEDTYKKYNAS-WRESLfYT 193
                     577777888899******************998777766533....3345568*******************************99.55544145 PP

  Nuc_sug_transp 215 allsi..ilalltvllkdgskisekG.....ffkGydlvvwvvvllqavGGlvvavvvkyaDni.lkgfatslaiil......stvasvllldlk 295
                       +si  +l ll+ + +++  + ++      +f+G   + w++ l++    l   v+v+ ++ +  ++ a +++iil      s   s+ll++ +
      EPX74280.1 194 HAFSIpfFLPLLGSIRRQWMLLFTDSkssnlYFFGMPPAFWYICLNT----LAQYVCVRGVNSLgSQSSALTVTIILnirkfvSLCLSILLFGNR 284
                     556662145678888999999988888888899********998765....5566777776665235566777888722222234679999999* PP

  Nuc_sug_transp 296 itllFllGallvia..avflY 314
                     ++   +lGa+lv    a+++Y
      EPX74280.1 285 LSGAVVLGACLVFGssATYVY 305
                     **********99852256666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       921  (0.0513693); expected 358.6 (0.02)
Passed bias filter:                      366  (0.0204139); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.22s 00:00:00.71 Elapsed: 00:00:00.38
# Mc/sec: 2550.62
//
Query:       EPX74281.1  [L=372]
Description: STAM like protein Hse1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-28   99.9   2.2    1.1e-28   99.9   2.2    1.7  2  VHS        VHS domain
    3.8e-17   61.6   1.7    4.5e-17   61.4   0.0    2.1  3  SH3_1      SH3 domain
    7.5e-14   51.3   0.0    1.7e-13   50.2   0.0    1.6  1  SH3_9      Variant SH3 domain
    1.8e-12   46.7   0.1    6.3e-12   45.0   0.1    1.9  2  SH3_2      Variant SH3 domain
    1.2e-05   25.6   3.3    2.2e-05   24.7   0.4    2.6  2  GAT        GAT domain
     0.0037   17.1   2.8     0.0037   17.1   2.8    2.5  3  UIM        Ubiquitin interaction motif
  ------ inclusion threshold ------
       0.01   15.6   4.5      0.028   14.2   4.5    1.7  1  RAP80_UIM  RAP80 N-terminal ubiquitin interaction motif
       0.32   10.6   2.4       0.45   10.1   2.4    1.3  1  GCD14      tRNA methyltransferase complex GCD14 subunit


Domain annotation for each model (and alignments):
>> VHS  VHS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.9   2.2   4.9e-32   1.1e-28       8     138 ..      10     139 ..       3     141 .. 0.92
   2 ?   -4.0   0.0       5.4   1.2e+04     100     119 ..     320     339 ..     317     346 .. 0.67

  Alignments for each domain:
  == domain 1  score: 99.9 bits;  conditional E-value: 4.9e-32
                 HHHHHHHT-TT-SS--HHHHHHHHHHHHCS.TCHHHHHHHHHHHHHT-SSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHHCTTTCHCS. CS
         VHS   8 ekliekATdeslreedlslileicDlinek.eagpkeavrlikkkinsknphvallaLklldalvkNcGskfhleiaskeflnelvklilekknsklak 105
                 +++i  ATde ++++ + li+++cDl+ ++ e+  ++a++ ++k++ns n++v+ll+L+l+da+vkNc +k  +eias+ f+++l++++ + + ++  +
  EPX74281.1  10 QTAILCATDENNTKDKWDLIMDVCDLLSSSsEEVCRNAIQFLNKRLNSVNSNVQLLTLTLTDAIVKNCDQKTQHEIASRLFTDSLLHIAGNPNTHN--Q 106
                 678999***********************99999*****************************************************666666555..5 PP

                 HHHHHHHHHHHHHHHTTT-TTGHHHHHHHHHHH CS
         VHS 106 vkkkvlelleeWadafknkpelkkisdvykllk 138
                 vk+k+  l+ eWa +++++p++  ++++ ++++
  EPX74281.1 107 VKSKIAVLVDEWARELRYDPSMDLMQQTCNEIR 139
                 **************************9988765 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 5.4
                 TCHCS.HHHHHHHHHHHHHH CS
         VHS 100 nsklakvkkkvlelleeWad 119
                 ++++  ++ k+++l+e++a 
  EPX74281.1 320 YHETIILRPKLIRLIEKYAS 339
                 55555677788888877664 PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.1       3.9   8.7e+03       9      16 ..     164     171 ..     163     172 .. 0.81
   2 !   61.4   0.0     2e-20   4.5e-17       1      48 []     220     265 ..     220     265 .. 0.97
   3 ?   -2.4   0.0       1.6   3.7e+03       8      22 ..     310     324 ..     309     326 .. 0.73

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 3.9
                 SSTTBXEB CS
       SH3_1   9 eesdELsf 16 
                 +e++EL+f
  EPX74281.1 164 KEEEELQF 171
                 6899**99 PP

  == domain 2  score: 61.4 bits;  conditional E-value: 2e-20
                 EESSSBEXSSTTBXEBSTTEEEEEEEECSSSEEEEEETTSTEEEEEEG CS
       SH3_1   1 iAlYDYeaeesdELsfkkGDviivleksedgWwkgrlkgtgkeGliPs 48 
                 +AlYD++a+e++ELsf+kGDvi vle + ++Wwkg +k  +k+G++P+
  EPX74281.1 220 RALYDFAASEPGELSFQKGDVILVLESVFKDWWKGSCK--NKVGIFPV 265
                 7*************************************..69*****5 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 1.6
                 XSSTTBXEBSTTEEE CS
       SH3_1   8 aeesdELsfkkGDvi 22 
                 a ++dEL+ k  ++i
  EPX74281.1 310 AADDDELQSKYHETI 324
                 7899***97766665 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.2   0.0   7.5e-17   1.7e-13       1      49 []     221     269 ..     221     269 .. 0.99

  Alignments for each domain:
  == domain 1  score: 50.2 bits;  conditional E-value: 7.5e-17
       SH3_9   1 AlypyepreddeLsLqrGDvitvieesedgWlegsltGrtGlvPanyve 49 
                 Aly++++ e+ eLs+q+GDvi+v+e    +W+ gs + + G +P+nyve
  EPX74281.1 221 ALYDFAASEPGELSFQKGDVILVLESVFKDWWKGSCKNKVGIFPVNYVE 269
                 8***********************************************7 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.0   0.1   2.8e-15   6.3e-12       1      55 [.     218     269 ..     218     271 .. 0.93
   2 ?   -1.8   0.0       1.2   2.6e+03       2      15 ..     331     344 ..     330     350 .. 0.82

  Alignments for each domain:
  == domain 1  score: 45.0 bits;  conditional E-value: 2.8e-15
                 EEEESS-B-SCGCCB--B-TTEEEEEE..EEEECT..TEEEEEECCCEEEEEGCGEE CS
       SH3_2   1 yvraiedyvgedkseLsfkkGdvikvlslgskdsd..gwwegevgGrvGlfPsslve 55 
                 +vra+ d+ ++ ++eLsf+kGdvi vl     +s   +ww+g+ +++vG+fP ++ve
  EPX74281.1 218 RVRALYDFAASEPGELSFQKGDVILVL-----ESVfkDWWKGSCKNKVGIFPVNYVE 269
                 689************************.....66667******************98 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 1.2
                 EEESS-B-SCGCCB CS
       SH3_2   2 vraiedyvgedkse 15 
                 +r+ie+y ++++++
  EPX74281.1 331 IRLIEKYASQKEEL 344
                 899****9988876 PP

>> GAT  GAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.1      0.36   8.1e+02       2      33 ..      46      77 ..      25      86 .. 0.65
   2 !   24.7   0.4   9.9e-09   2.2e-05       7      76 ..     299     363 ..     294     364 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.36
         GAT  2 nnaklLsemLsstepdeellenellkeLyetc 33
                n ++ L+  L+s++++ +ll   l +  +++c
  EPX74281.1 46 NAIQFLNKRLNSVNSNVQLLTLTLTDAIVKNC 77
                44555666666665444455555555555555 PP

  == domain 2  score: 24.7 bits;  conditional E-value: 9.9e-09
         GAT   7 LsemLsstepdeellenellkeLyetckamqpriqklieetadeedllaelLqlNDeLnnvlerYerlkk 76 
                 L  +Ls+++p+   ++++ l+  y++   ++p++++lie++a +++   el  lN+ L  + + Ye l++
  EPX74281.1 299 LLNILSAAPPE--AADDDELQSKYHETIILRPKLIRLIEKYASQKE---ELVDLNERLLAARKDYEVLYE 363
                 78899998866..7788888888888888************99996...****************98875 PP

>> UIM  Ubiquitin interaction motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   2.8   1.6e-06    0.0037       2      17 .]     165     180 ..     164     180 .. 0.94
   2 ?   -4.3   1.6         8   1.8e+04       2       7 ..     312     317 ..     312     317 .. 0.75
   3 ?   -3.8   2.8       7.6   1.7e+04      11      17 .]     363     369 ..     363     369 .. 0.85

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 1.6e-06
         UIM   2 EdedLqrAlalSlqEa 17 
                 E+e+Lq AlalSl+Ea
  EPX74281.1 165 EEEELQFALALSLSEA 180
                 9*************95 PP

  == domain 2  score: -4.3 bits;  conditional E-value: 8
         UIM   2 EdedLq 7  
                 +d++Lq
  EPX74281.1 312 DDDELQ 317
                 688887 PP

  == domain 3  score: -3.8 bits;  conditional E-value: 7.6
         UIM  11 alSlqEa 17 
                 ++S++E+
  EPX74281.1 363 EQSMSEM 369
                 68***96 PP

>> RAP80_UIM  RAP80 N-terminal ubiquitin interaction motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   4.5   1.2e-05     0.028       9      35 ..     166     192 ..     157     196 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 1.2e-05
   RAP80_UIM   9 tEeEqFALALkmsEqEArqvndqeEeE 35 
                  Ee qFALAL +sE  A++  +qe  +
  EPX74281.1 166 EEELQFALALSLSEATAQEAKKQEKTD 192
                 4677******************99765 PP

>> GCD14  tRNA methyltransferase complex GCD14 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   2.4    0.0002      0.45     122     234 ..     101     215 ..      40     228 .. 0.64

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.0002
       GCD14 122 PaPweaiphaakalkkeggrlCsfsPCieqvqrtceaLrelgfteietlevllrtyevr.kskleeidl.aekrleenerkriekakrrkaskdakved 218
                 P+  + +++ +++l +e +r   + P ++ +q+tc+++r+l+ +++++     ++ +   + k ee +l ++ +l  +e ++ e +k++k+ +++++++
  EPX74281.1 101 PNTHNQVKSKIAVLVDEWARELRYDPSMDLMQQTCNEIRKLDIIDLRAPKKPSKQKKNNsELKKEEEELqFALALSLSEATAQEAKKQEKTDDKNNSQQ 199
                 67778899999999999999999***********************99876554433220223333333244445555555555555555554444444 PP

       GCD14 219 kssksstevllkPvse 234
                   +  +t + + P s 
  EPX74281.1 200 PVQAQDTSLNATPASS 215
                 4444456667777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (372 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1943  (0.108372); expected 358.6 (0.02)
Passed bias filter:                      577  (0.0321825); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.72u 0.34s 00:00:01.06 Elapsed: 00:00:00.56
# Mc/sec: 1986.75
//
Query:       EPX74282.1  [L=605]
Description: TRAPP complex subunit Trs85 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.8e-87  291.9   3.3    1.1e-86  291.4   3.3    1.1  1  TRAPPC-Trs85  ER-Golgi trafficking TRAPP I complex 85 kDa sub


Domain annotation for each model (and alignments):
>> TRAPPC-Trs85  ER-Golgi trafficking TRAPP I complex 85 kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  291.4   3.3   6.1e-91   1.1e-86       2     403 ..     209     591 ..     208     593 .. 0.94

  Alignments for each domain:
  == domain 1  score: 291.4 bits;  conditional E-value: 6.1e-91
  TRAPPC-Trs85   2 dpleslrkllqefsnlqsslpnspkwlnpdvlryyvllhDeseeeeskaeallekikktlglecalLpinSrsgssaasaessssadsaeeadesep 98 
                    p eslr+++++  +++      p+++++d+l+++v++hDe++++++ ++a+++++ +t+g   ++L++        +s++++ + +++ ++++s++
    EPX74282.1 209 TPFESLREIINSLPQISL-----PAFVSNDILNFFVYVHDEDQHDIELSMAIFDTMLQTFGGRGYFLRL--------HSQKATLDYEHTIPFPRSSW 292
                   6999************99.....**********************************************........677999************** PP

  TRAPPC-Trs85  99 lsaaeeaaslsqsesssleedlssestshgalLslsdvdsirafirelvvqslipfmerkirqlneqiaqsRkgltgkLfsaskklfgsskpssssa 195
                   lsa+e+   l  s++++              lL++sd++si++++++++++++ip++++++rq+++q+a++R+g+tgkLf askkl++   +++++ 
    EPX74282.1 293 LSAEERLRLLDGSQKEQQ-------------LLFESDAESIKRLVSHIAFNGVIPHLDKCVRQWDDQYASPRRGFTGKLFFASKKLIS---TQNNTH 373
                   ***999988888777776.............8*******************************************************5...568899 PP

  TRAPPC-Trs85 196 sssynaasayYsasspElqlRkLADlafmlrdyklAystYeslkkDfknDkawkylAgalEmaavslllsgqqlstkk..kndeidpylenalqtye 290
                   +s++ a+s++Y+++s+E+ lR+LAD++fmlrdy +A ++Ye+++k+++nD+a++y+A++ Em+ +  ++ + ++++ +  ++  ++ ++ +a+++y+
    EPX74282.1 374 NSNFFASSNVYRPDSIEAYLRRLADYSFMLRDYTHANQIYEIASKQYANDNAYLYYAASSEMIVITEYIIHLDRPYMSltNKLRLNDCMRSAMENYL 470
                   99999999**********************************************************9999977777777767788***********9 PP

  TRAPPC-Trs85 291 krc.saklyalRcallsaelllslsdyseaaletllkltselddaavrsalllEqaalcflqr.......sagltrrRKaafhmvlAahryskagqk 379
                   ++  +++++a Rc+ll+ + l sl +  ++a+++ + l  +   ++v +a++++q   ++ q+         +++r+RK af++++Aa+++ ++++ 
    EPX74282.1 471 NKPfNSYYHAARCFLLLGQYLSSLPNSRDDAANWNAGLVFSKRLGPVGRAIIFQQTYELYRQSestnsdtLTDIRRHRKTAFWCIMAADAWLRCHIS 567
                   887799*******************999999998886655555579*************************************************** PP

  TRAPPC-Trs85 380 rqalrclkqalsvykgkgWslaed 403
                     a+  ++ a++ y+++ W ++e+
    EPX74282.1 568 FRAKPFIDTAKKFYSQVAWPDLEE 591
                   *********************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (605 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       475  (0.0264934); expected 358.6 (0.02)
Passed bias filter:                      348  (0.0194099); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.27s 00:00:00.85 Elapsed: 00:00:00.45
# Mc/sec: 4047.32
//
Query:       EPX74283.1  [L=138]
Description: postreplication repair E3 ubiquitin-protein ligase rad18, partial [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-07   30.2   0.0      5e-07   29.3   0.0    1.5  1  SAP       SAP domain
  ------ inclusion threshold ------
      0.043   13.5   0.2       0.12   12.1   0.1    1.6  2  DUF3507   Domain of unknown function (DUF3507)
      0.045   13.3   0.2      0.045   13.2   0.2    1.1  1  ECH_2     Enoyl-CoA hydratase/isomerase
      0.055   13.5   0.1       0.09   12.8   0.1    1.3  1  DUF1263   Protein of unknown function (DUF1263)


Domain annotation for each model (and alignments):
>> SAP  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.3   0.0   1.1e-10     5e-07       2      34 ..      19      51 ..      18      52 .. 0.91

  Alignments for each domain:
  == domain 1  score: 29.3 bits;  conditional E-value: 1.1e-10
                TT--HHHHHHHHHHTT--TTS-HHHHHHHHHHH CS
         SAP  2 skltVaeLKeeLkkrGLptsGkKaeLieRLkey 34
                 +l+ ++ +++L ++GLpt G+K++L+ R+ ++
  EPX74283.1 19 ALLSESKIRSKLVEMGLPTEGNKQVLQRRHAQW 51
                67888999**********************987 PP

>> DUF3507  Domain of unknown function (DUF3507)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.39   1.8e+03     112     127 ..      16      30 ..      11      42 .. 0.74
   2 ?   12.1   0.1   2.7e-05      0.12      96     149 ..      59     110 ..      43     120 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.39
     DUF3507 112 LkkYallsesklskik 127
                 L  Yallsesk++   
  EPX74283.1  16 LT-YALLSESKIRSKL 30 
                 55.8888888887655 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 2.7e-05
     DUF3507  96 pkyqksnvrkslAvalLkkYallsesklskikselsklleyDethaGdlAsrck 149
                 + +qk  v k    a L+k++ +++++    k++l   +e+  t+aGd+A+ ++
  EPX74283.1  59 L-DQKHPVSKKALLAQLRKWEKTQSNANVITKEKLG-GTEWGSTYAGDFANLVQ 110
                 3.4455555555578999999988776555556666.59***********9776 PP

>> ECH_2  Enoyl-CoA hydratase/isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.2     1e-05     0.045     239     319 ..      45     126 ..      22     138 .] 0.80

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1e-05
                 H.T..--SHHHHHHHHHHHHS-HHHHHHHHHHHHHHTTT--HHHHHHHHHHHHHHHHHH..SSHHHHHHHH..TTS-------SS CS
       ECH_2 239 ekaeaeedewakktletlkkrsPtslkvtleqlrrgrklsslaevlrmElrlalrllae..kDfveGvral..lvdkdkkPkWkp 319
                 +   +++++w++   ++l ++ P+s k+ l+qlr+ +k++s a+v+++E    +++ ++  +Df++ v+++   ++k+ +P+ + 
  EPX74283.1  45 Q---RRHAQWVTMYNSNLDQKHPVSKKALLAQLRKWEKTQSNANVITKEKLGGTEWGSTyaGDFANLVQKAknSIKKSDAPSPDE 126
                 3...45689****************************************998888877556888888875412577777776554 PP

>> DUF1263  Protein of unknown function (DUF1263)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1     2e-05      0.09       9      43 ..     102     135 ..      99     137 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2e-05
     DUF1263   9 yndllamvrlkpgsdltgtdvPvtgrstlaaArde 43 
                 ++d+ ++v  k+   +  +d P+++  t++ A de
  EPX74283.1 102 AGDFANLVQ-KAKNSIKKSDAPSPDEQTSSTAVDE 135
                 799999997.99999*****************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       607  (0.0338558); expected 358.6 (0.02)
Passed bias filter:                      324  (0.0180713); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 985.08
//
Query:       EPX74284.1  [L=343]
Description: Rad18 Rhp18 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.6e-11   41.9  13.3    1.3e-10   41.0  10.2    2.2  2  zf-C3HC4_2      Zinc finger, C3HC4 type (RING finger)
    4.9e-08   32.7  12.5    1.9e-07   30.9   7.7    2.3  2  zf-C3HC4_3      Zinc finger, C3HC4 type (RING finger)
    5.7e-07   29.3  10.7    5.7e-07   29.3  10.7    2.4  2  zf-C3HC4        Zinc finger, C3HC4 type (RING finger)
    8.7e-07   28.6   0.0      2e-06   27.4   0.0    1.7  1  SAP             SAP domain
    1.6e-06   28.4  16.1    2.6e-06   27.7  11.5    2.3  2  zf-RING_2       Ring finger domain
    2.7e-06   27.2   9.9    2.7e-06   27.2   9.9    2.3  2  zf-RING_5       zinc-RING finger domain
    1.2e-05   25.1   3.0    1.2e-05   25.1   3.0    2.0  2  zf-RING_6       zf-RING of BARD1-type protein
    6.9e-05   22.9  14.5    7.6e-05   22.8  11.6    2.3  2  zf-C3HC4_4      zinc finger of C3HC4-type, RING
    7.3e-05   22.5  12.8     0.0066   16.3   9.0    2.4  2  Prok-RING_4     Prokaryotic RING finger family 4
    0.00016   21.2   1.3    0.00033   20.2   0.1    2.1  2  Sgf11           Sgf11 (transcriptional regulation protein)
    0.00029   20.8  12.4    0.00029   20.8  12.4    2.4  2  zf-RING_UBOX    RING-type zinc-finger
    0.00045   19.9   7.6     0.0027   17.4   7.6    2.2  1  RNF220          E3 ubiquitin-protein ligase RNF220
      0.001   19.1   3.8      0.001   19.1   3.8    2.1  2  zf-RING_10      zinc RING finger of MSL2
     0.0013   18.7   1.2     0.0029   17.5   1.2    1.7  1  PRP21_like_P    Pre-mRNA splicing factor PRP21 like protein
     0.0028   17.9   8.0     0.0028   17.9   8.0    2.6  2  zf-rbx1         RING-H2 zinc finger domain
     0.0062   16.7   1.4       0.06   13.5   0.0    2.9  3  U-box           U-box domain
  ------ inclusion threshold ------
      0.015   15.6   0.2      0.015   15.6   0.2    2.9  2  zf-Di19         Drought induced 19 protein (Di19), zinc-bindi
      0.016   15.0   4.5      0.016   15.0   4.5    2.5  2  zf-RING_4       RING/Ubox like zinc-binding domain
      0.066   13.3   0.6       0.57   10.3   1.5    2.2  1  zf-ANAPC11      Anaphase-promoting complex subunit 11 RING-H2
      0.081   12.6   1.3       0.67    9.6   0.1    2.2  2  DUF3507         Domain of unknown function (DUF3507)
       0.13   12.3   0.1       0.37   10.9   0.1    1.8  1  DUF1263         Protein of unknown function (DUF1263)
       0.15   12.0   8.6       0.58   10.2   3.4    2.5  2  zinc-ribbons_6  zinc-ribbons
       0.17   11.5   1.1       0.41   10.3   0.0    2.3  2  zf_UBZ          Ubiquitin-Binding Zinc Finger
       0.76    9.2   3.5       0.73    9.3   2.3    1.6  2  ECH_2           Enoyl-CoA hydratase/isomerase
        1.6    8.6   9.5       0.41   10.5   4.6    2.2  2  zf-Nse          Zinc-finger of the MIZ type in Nse subunit
        3.7    7.7   8.8        2.9    8.1   6.0    2.1  2  DUF1272         Protein of unknown function (DUF1272)
        4.5    7.4   8.2         12    6.0   4.0    2.5  2  DZR             Double zinc ribbon


Domain annotation for each model (and alignments):
>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.0  10.2   1.9e-13   1.3e-10       1      40 []      28      66 ..      28      66 .. 0.98
   2 ?    1.4   0.0      0.45     3e+02       2       8 ..     153     159 ..     145     167 .. 0.72

  Alignments for each domain:
  == domain 1  score: 41.0 bits;  conditional E-value: 1.9e-13
  zf-C3HC4_2  1 kCpiCldmlkdpsvvtpCgHvfCqkCilrsLeekneCPlC 40
                +C iC d++k p v+t C H+fC+ Ci+ +L+e+  CP C
  EPX74284.1 28 RCLICHDFFKGP-VITSCSHTFCSYCIRDYLREHPICPAC 66
                6*********99.*************************** PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.45
  zf-C3HC4_2   2 CpiCldm 8  
                 Cp+C  +
  EPX74284.1 153 CPVCARE 159
                 7777655 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.9   7.7   2.8e-10   1.9e-07       3      47 ..      27      70 ..      25      73 .. 0.94
   2 ?    4.3   0.2     0.056        37      39      49 ..     152     162 ..     143     164 .. 0.78

  Alignments for each domain:
  == domain 1  score: 30.9 bits;  conditional E-value: 2.8e-10
                SB-TTTSSSBS-EEETTEEEEEE-HHHHHHHHHTT-B-TTT--B- CS
  zf-C3HC4_3  3 eeCviClerprnvvllpCgHlvlCeeCaekllkrkkkCpiCrrpi 47
                  C+iC++  +  v+  C H+ +C+ C +++l++++ Cp Cr+p 
  EPX74284.1 27 MRCLICHDFFKGPVITSCSHT-FCSYCIRDYLREHPICPACRAPE 70
                57*******************.********************985 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.056
                 B-TTT--B--E CS
  zf-C3HC4_3  39 kCpiCrrpiek 49 
                  Cp+C r++++
  EPX74284.1 152 VCPVCAREVSQ 162
                 69999998876 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.3  10.7   8.7e-10   5.7e-07       1      41 []      29      66 ..      29      66 .. 0.97
   2 ?    2.3   0.2      0.23   1.5e+02       1      17 [.     153     172 ..     142     173 .. 0.71

  Alignments for each domain:
  == domain 1  score: 29.3 bits;  conditional E-value: 8.7e-10
                -TTT-S--SS-E.E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4  1 CpiCleeakepnelleCkHsfCskCirkilksrkkvkCPlC 41
                C iC + +k p+ ++ C H+fCs Cir +l+  ++  CP C
  EPX74284.1 29 CLICHDFFKGPV-ITSCSHTFCSYCIRDYLR--EHPICPAC 66
                99**********.******************..8888**** PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.23
                 -TTT-S--SS-E....E-TT CS
    zf-C3HC4   1 CpiCleeakepn...elleC 17 
                 Cp+C  e+++      l++C
  EPX74284.1 153 CPVCAREVSQSEinqHLDTC 172
                 77777777766555555555 PP

>> SAP  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   0.0     3e-09     2e-06       2      34 ..     224     256 ..     223     257 .. 0.91

  Alignments for each domain:
  == domain 1  score: 27.4 bits;  conditional E-value: 3e-09
                 TT--HHHHHHHHHHTT--TTS-HHHHHHHHHHH CS
         SAP   2 skltVaeLKeeLkkrGLptsGkKaeLieRLkey 34 
                  +l+ ++ +++L ++GLpt G+K++L+ R+ ++
  EPX74284.1 224 ALLSESKIRSKLVEMGLPTEGNKQVLQRRHAQW 256
                 67888999**********************987 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7  11.5   3.8e-09   2.6e-06       2      44 .]      28      67 ..      27      67 .. 0.84
   2 ?    2.8   0.1      0.22   1.5e+02       3      13 ..     153     163 ..     140     174 .. 0.69

  Alignments for each domain:
  == domain 1  score: 27.7 bits;  conditional E-value: 3.8e-09
   zf-RING_2  2 eCpICleelssadsvlllpCgHvfhreClerwlrssstCPlCr 44
                 C IC + ++    v++  C+H+f+  C++++lr+++ CP+Cr
  EPX74284.1 28 RCLICHDFFK--GPVIT-SCSHTFCSYCIRDYLREHPICPACR 67
                6****76664..34444.4***********************9 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.22
   zf-RING_2   3 CpICleelssa 13 
                 Cp+C  e+s++
  EPX74284.1 153 CPVCAREVSQS 163
                 77776666555 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.2   9.9   4.1e-09   2.7e-06       1      43 [.      28      67 ..      28      68 .. 0.97
   2 ?    1.9   0.2      0.33   2.2e+02      38      43 ..     152     157 ..     142     173 .. 0.70

  Alignments for each domain:
  == domain 1  score: 27.2 bits;  conditional E-value: 4.1e-09
   zf-RING_5  1 hCnkCfeklskeekfyltsCgHifCekClkkllekeavCpiCr 43
                +C +C++ +   +++++tsC+H+fC+ C++ +l +   Cp+Cr
  EPX74284.1 28 RCLICHDFF---KGPVITSCSHTFCSYCIRDYLREHPICPACR 67
                6********...******************************9 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.33
   zf-RING_5  38 vCpiCr 43 
                 vCp+C 
  EPX74284.1 152 VCPVCA 157
                 566663 PP

>> zf-RING_6  zf-RING of BARD1-type protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   3.0   1.7e-08   1.2e-05       4      51 ..      23      71 ..      19      85 .. 0.81
   2 ?   -0.7   0.1       1.9   1.3e+03      43      63 ..     153     171 ..     150     173 .. 0.72

  Alignments for each domain:
  == domain 1  score: 25.1 bits;  conditional E-value: 1.7e-08
   zf-RING_6  4 lekllrcsrctdilrepvclggcehifcsncisdcfgsg..cpvcytpaw 51
                l+  +rc  c d ++ pv    c h fcs ci d +     cp c +p  
  EPX74284.1 23 LDSSMRCLICHDFFKGPVI-TSCSHTFCSYCIRDYLREHpiCPACRAPEQ 71
                67789************95.78************9975334999999965 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 1.9
   zf-RING_6  43 cpvcytpawiqdvkinrqlds 63 
                 cpvc     + +  in+ ld+
  EPX74284.1 153 CPVCARE--VSQSEINQHLDT 171
                 9999654..566778888876 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8  11.6   1.1e-07   7.6e-05       1      42 []      29      66 ..      29      66 .. 0.93
   2 ?   -0.0   0.0       1.5     1e+03       1       4 [.     153     156 ..     143     165 .. 0.81

  Alignments for each domain:
  == domain 1  score: 22.8 bits;  conditional E-value: 1.1e-07
  zf-C3HC4_4  1 CPiCldYLekPvsleCGhsfClsCisslqkepdgeqllCplC 42
                C iC d+++ Pv  +C h+fC  Ci  +  e       Cp C
  EPX74284.1 29 CLICHDFFKGPVITSCSHTFCSYCIRDYLREH----PICPAC 66
                99*************************99988....568888 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 1.5
  zf-C3HC4_4   1 CPiC 4  
                 CP+C
  EPX74284.1 153 CPVC 156
                 6666 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   9.0   9.9e-06    0.0066       1      38 [.      29      68 ..      29      74 .. 0.91
   2 !    7.5   0.1    0.0054       3.6      30      44 ..     150     164 ..     143     166 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 9.9e-06
  Prok-RING_4  1 CvlCgeqekkailepCgHlvCkeCfdsk..dlssCPlCqr 38
                 C++C    k +++ +C H +C  C  +   ++  CP C+ 
   EPX74284.1 29 CLICHDFFKGPVITSCSHTFCSYCIRDYlrEHPICPACRA 68
                 **************************9866777*****95 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0054
  Prok-RING_4  30 lssCPlCqrrisksd 44 
                  l  CP+C r++s+s+
   EPX74284.1 150 LVVCPVCAREVSQSE 164
                  457*******99875 PP

>> Sgf11  Sgf11 (transcriptional regulation protein)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1       8.2   5.4e+03       7      12 ..      49      54 ..      46      55 .. 0.80
   2 !   20.2   0.1   4.9e-07   0.00033       4      28 ..     150     174 ..     148     179 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 8.2
                -TTTSS CS
       Sgf11  7 CpnCgR 12
                C +C R
  EPX74284.1 49 CSYCIR 54
                999*88 PP

  == domain 2  score: 20.2 bits;  conditional E-value: 4.9e-07
                 EEE-TTTSSEEEGGGHHHHHHHHCH CS
       Sgf11   4 yvtCpnCgRqiaasRFApHLekClg 28 
                 +v+Cp C R++++s   +HL+ Cl 
  EPX74284.1 150 LVVCPVCAREVSQSEINQHLDTCLA 174
                 79*********************95 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8  12.4   4.4e-07   0.00029       1      39 []      29      64 ..      29      67 .. 0.90
   2 ?   -0.3   0.3       1.7   1.1e+03       1       7 [.     153     159 ..     153     173 .. 0.78

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 4.4e-07
  zf-RING_UBOX  1 CpIClelftdPlv.lpCGHtFCreClwelskslegafkCP 39
                  C IC + f+ P v ++C+HtFC+ C+   ++ l+ +  CP
    EPX74284.1 29 CLICHDFFKGP-ViTSCSHTFCSYCI---RDYLREHPICP 64
                  99*********.6479**********...88888888887 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 1.7
  zf-RING_UBOX   1 CpIClel 7  
                   Cp+C  +
    EPX74284.1 153 CPVCARE 159
                   ****755 PP

>> RNF220  E3 ubiquitin-protein ligase RNF220
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   7.6     4e-06    0.0027     100     148 ..     141     191 ..      57     207 .. 0.76

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 4e-06
      RNF220 100 karkrkped.nvcpvCnkkvl.eeltlhveaclrksesedededdedesid 148
                 +++krk  +  vcpvC ++v+  e+++h+++cl+   ++++++    ++id
  EPX74284.1 141 NRKKRKLRNlVVCPVCAREVSqSEINQHLDTCLASPGQSSTENRFSSQEID 191
                 34578888879*********989**********987744444444444444 PP

>> zf-RING_10  zinc RING finger of MSL2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   3.8   1.6e-06     0.001       2      55 ..      28      81 ..      27      93 .. 0.81
   2 ?   -0.2   0.2       1.7   1.1e+03      38      55 ..     151     169 ..     137     175 .. 0.56

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 1.6e-06
  zf-RING_10  2 sCvvCckLLvdPlepkekeCqHyvCrlCvgkkkklkpsCsqCk...dyekyeenkql 55
                 C++C    + P+     +C H  C  C+++  + +p C+ C+   + ++ + nk +
  EPX74284.1 28 RCLICHDFFKGPVIT---SCSHTFCSYCIRDYLREHPICPACRapeQESRLRKNKVV 81
                699*****9999875...9***********************955445555666655 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 1.7
  zf-RING_10  38 psCsqCk.dyekyeenkql 55 
                   C+ C  + ++ e n++l
  EPX74284.1 151 VVCPVCArEVSQSEINQHL 169
                 3566665455555556555 PP

>> PRP21_like_P  Pre-mRNA splicing factor PRP21 like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   1.2   4.3e-06    0.0029     138     194 ..     129     192 ..      95     216 .. 0.66

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 4.3e-06
  PRP21_like_P 138 yesrlkkrknskatkekkka...kcpitgeliPedeleeHmrieLlDPrykeqkdkl....vek 194
                   +es+++  +++++ k++k     +cp++   + ++e+++H+ + L  P +    +++    +++
    EPX74284.1 129 EESENSHPSSYTNRKKRKLRnlvVCPVCAREVSQSEINQHLDTCLASPGQSSTENRFssqeIDE 192
                   44444444444444433333556*************************9988877775444333 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   8.0   4.2e-06    0.0028      27      55 .]      39      67 ..      25      67 .. 0.86
   2 ?   -0.2   0.1       1.9   1.3e+03      49      54 ..     151     156 ..     144     173 .. 0.79

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 4.2e-06
     zf-rbx1 27 vvlGeCgHaFHlhCiskWlktrkvCPlcr 55
                +v+ +C+H+F   Ci+++l+++  CP cr
  EPX74284.1 39 PVITSCSHTFCSYCIRDYLREHPICPACR 67
                56779***********************8 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 1.9
     zf-rbx1  49 kvCPlc 54 
                  vCP+c
  EPX74284.1 151 VVCPVC 156
                 568888 PP

>> U-box  U-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.0   9.1e-05      0.06       6      68 ..      28      89 ..      26      93 .. 0.91
   2 ?   -0.7   0.0       2.5   1.6e+03      21      37 ..     154     171 ..     147     199 .. 0.73
   3 ?   -0.4   0.3         2   1.3e+03      46      72 ..     261     287 ..     246     288 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 9.1e-05
                B-TTT-SB-SSEEEETTTEEEEHHHHHHHHTT.SSB-TTT-SB--GGGSEE-HHHHHHHHHHH CS
       U-box  6 ldpitlelmkdPvilpsgvvvdrstiekhllsrdktdPftrepltqdqlipnlelKekIdefl 68
                ++ i    +k Pvi++ ++++    i  +l++ ++ +P  r+p +++ l  n  +    d+f 
  EPX74284.1 28 RCLICHDFFKGPVITSCSHTFCSYCIRDYLRE-HPICPACRAPEQESRLRKNKVVEDILDAFH 89
                67899999************************.*******************99888888876 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 2.5
                 TTT.EEEEHHHHHHHHTT CS
       U-box  21 psg.vvvdrstiekhlls 37 
                 p     v +s i++hl+ 
  EPX74284.1 154 PVCaREVSQSEINQHLDT 171
                 433356788999999876 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 2
                 -SB--GGGSEE-HHHHHHHHHHHHHCT CS
       U-box  46 repltqdqlipnlelKekIdefleekr 72 
                 ++ l+q++++++ +l ++  ++ ++++
  EPX74284.1 261 NSNLDQKHPVSKKALLAQLRKWEKTQS 287
                 678999999999999999999988876 PP

>> zf-Di19  Drought induced 19 protein (Di19), zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   1.9       1.7   1.1e+03      32      38 ..      61      67 ..      45      91 .. 0.64
   2 ?   15.6   0.2   2.2e-05     0.015      28      50 ..     147     170 ..     138     173 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 1.7
     zf-Di19 32 vvCPvCa 38
                 +CP C 
  EPX74284.1 61 PICPACR 67
                4777775 PP

  == domain 2  score: 15.6 bits;  conditional E-value: 2.2e-05
     zf-Di19  28 eskevvCPvCaekvtk.dlvaHlt 50 
                  ++ vvCPvCa +v++ ++ +Hl 
  EPX74284.1 147 LRNLVVCPVCAREVSQsEINQHLD 170
                 56789******9998768999995 PP

>> zf-RING_4  RING/Ubox like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   4.5   2.4e-05     0.016      19      46 ..      43      69 ..      40      69 .. 0.92
   2 ?    0.8   0.2      0.63   4.2e+02       1      11 [.     153     163 ..     149     173 .. 0.65

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 2.4e-05
   zf-RING_4 19 eCgyqiClfCyhrileeeegrCPaCree 46
                +C + +C  C ++ l+ e+ +CPaCr +
  EPX74284.1 43 SCSHTFCSYCIRDYLR-EHPICPACRAP 69
                6**************6.6********75 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.63
   zf-RING_4   1 cplCdeeldet 11 
                 cp+C+ e++++
  EPX74284.1 153 CPVCAREVSQS 163
                 78888877443 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   1.5   0.00086      0.57      48      79 ..      40      68 ..      24      77 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00086
                EEBTTS-EEEHHHHHHHHHHHSTSSB-TTTSS CS
  zf-ANAPC11 48 vlGkckhnfhlhcilkwletetskglcpmcrq 79
                v+ +c+h+f  +ci  +l ++     cp cr 
  EPX74284.1 40 VITSCSHTFCSYCIRDYLREH---PICPACRA 68
                7889**************876...57888884 PP

>> DUF3507  Domain of unknown function (DUF3507)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.2      0.28   1.9e+02      88     127 ..     197     235 ..     183     245 .. 0.81
   2 ?    9.6   0.1     0.001      0.67      98     149 ..     265     315 ..     245     325 .. 0.72

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.28
     DUF3507  88 ypaveNLspkyqksnvrkslAvalLkkYallsesklskik 127
                   +v+NL    ++  +   + +  L  Yallsesk++   
  EPX74284.1 197 SKSVNNLAVTNKELPESERVRIPKLT-YALLSESKIRSKL 235
                 5689999999999999999999***9.*******998765 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.001
     DUF3507  98 yqksnvrkslAvalLkkYallsesklskikselsklleyDethaGdlAsrck 149
                 +qk  v k    a L+k++ +++++    k++l   +e+  t+aGd+A+ ++
  EPX74284.1 265 DQKHPVSKKALLAQLRKWEKTQSNANVITKEKLG-GTEWGSTYAGDFANLVQ 315
                 4455555555578999999987776555556666.59***********9775 PP

>> DUF1263  Protein of unknown function (DUF1263)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   0.00056      0.37       9      43 ..     307     340 ..     304     342 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00056
     DUF1263   9 yndllamvrlkpgsdltgtdvPvtgrstlaaArde 43 
                 ++d+ ++v  k+   +  +d P+++  t++ A de
  EPX74284.1 307 AGDFANLVQ-KAKNSIKKSDAPSPDEQTSSTAVDE 340
                 689999997.99999*****************998 PP

>> zinc-ribbons_6  zinc-ribbons
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   3.4   0.00088      0.58      10      40 ..      40      71 ..      23      75 .. 0.72
   2 ?    4.2   0.2     0.065        43       2      22 ..     152     172 ..     141     183 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00088
                    -EE-SSEEE-TTT--EEE.EEEE-SSS-S--- CS
  zinc-ribbons_6 10 lekrgeqyhCeaCqedlk.kealCpeCeqele 40
                    + ++ ++++C+ C +d+  ++++Cp C+ + +
      EPX74284.1 40 VITSCSHTFCSYCIRDYLrEHPICPACRAPEQ 71
                    3345589******998751678*****98755 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.065
                     --SSS-S--EE-SSEEE-TTT CS
  zinc-ribbons_6   2 kCpeCqqelekrgeqyhCeaC 22 
                      Cp C +e+++++ + h ++C
      EPX74284.1 152 VCPVCAREVSQSEINQHLDTC 172
                     588888888887777777777 PP

>> zf_UBZ  Ubiquitin-Binding Zinc Finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.2       6.7   4.4e+03       4      10 ..      62      68 ..      60      71 .. 0.84
   2 ?   10.3   0.0   0.00062      0.41       3      22 ..     151     170 ..     149     170 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 6.7
      zf_UBZ  4 lCerCgk 10
                +C+ C +
  EPX74284.1 62 ICPACRA 68
                6****75 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00062
      zf_UBZ   3 ylCerCgkeipeselqEHeD 22 
                 ++C+ C +e+++se  +H+D
  EPX74284.1 151 VVCPVCAREVSQSEINQHLD 170
                 79*****************9 PP

>> ECH_2  Enoyl-CoA hydratase/isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.5       1.1   7.4e+02     224     296 ..     155     237 ..      87     253 .. 0.57
   2 ?    9.3   2.3    0.0011      0.73     238     317 ..     249     329 ..     156     343 .] 0.70

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 1.1
                 HHT.-S-TTTHHHHHH.......T..--SHHHHHHH..HHHHHS-HHHHHHHHHHHHHHTTT-..-HHHHHHHHHHHHHHHHH CS
       ECH_2 224 rlfsadsveeiveaLek......aeaeedewakktl..etlkkrsPtslkvtleqlrrgrkls..slaevlrmElrlalrlla 296
                  + ++ s +ei ++L++      ++++e+++ ++ +  ++ +++s   l+vt ++l ++++ +  +l+ +l  E ++ ++l++
  EPX74284.1 155 VCAREVSQSEINQHLDTclaspgQSSTENRFSSQEIdeKKSESKSVNNLAVTNKELPESERVRipKLTYALLSESKIRSKLVE 237
                 23333366677777765555666555566666666522344466667777777777766665444566666666666666655 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.0011
                 HH.T..--SHHHHHHHHHHHHS-HHHHHHHHHHHHHHTTT--HHHHHHHHHHHHHHHHHH..SSHHHHHHHH..TTS------- CS
       ECH_2 238 LekaeaeedewakktletlkkrsPtslkvtleqlrrgrklsslaevlrmElrlalrllae..kDfveGvral..lvdkdkkPkW 317
                 L   ++++++w++   ++l ++ P+s k+ l+qlr+ +k++s a+v+++E    +++ ++  +Df++ v+++   ++k+ +P+ 
  EPX74284.1 249 L---QRRHAQWVTMYNSNLDQKHPVSKKALLAQLRKWEKTQSNANVITKEKLGGTEWGSTyaGDFANLVQKAknSIKKSDAPSP 329
                 3...345789*******************************9********9888888765568888877653115677666655 PP

>> zf-Nse  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   4.6   0.00062      0.41      10      56 ..      25      66 ..      20      67 .. 0.88
   2 ?   -0.4   0.2       1.6     1e+03      46      56 ..     148     156 ..     141     157 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00062
                XXSB-TTTSSB-SSEEEESSS--EEEHHHHHHHCTTTS-EE-SCCC- CS
      zf-Nse 10 islkCPltlqpfeePvtskkCpHvFEreaIlelikrkktvkCPvagC 56
                 s++C +    f+ Pv+ + C H+F    I +++  +++  CP   C
  EPX74284.1 25 SSMRCLICHDFFKGPVI-TSCSHTFCSYCIRDYL--REHPICPA--C 66
                589*************9.78**************..66777887..5 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 1.6
                 TS-EE-SCCC- CS
      zf-Nse  46 kktvkCPvagC 56 
                 ++ v CPv  C
  EPX74284.1 148 RNLVVCPV--C 156
                 56789***..7 PP

>> DUF1272  Protein of unknown function (DUF1272)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   6.0    0.0043       2.9      23      48 ..      40      67 ..      26      71 .. 0.83
   2 ?   -1.1   0.0       3.1   2.1e+03      43      50 ..     152     159 ..     145     164 .. 0.69

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0043
     DUF1272 23 ricsyEctFCaeCaeevl..envCPncg 48
                +i s  +tFC+ C    l  + +CP c 
  EPX74284.1 40 VITSCSHTFCSYCIRDYLreHPICPACR 67
                5788889***********55568****5 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 3.1
     DUF1272  43 vCPncgGe 50 
                 vCP c+ e
  EPX74284.1 152 VCPVCARE 159
                 67777655 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   4.0     0.019        12      28      48 ..      46      66 ..      19      74 .. 0.65
   2 ?    2.9   0.1      0.18   1.2e+02      28      41 ..     150     163 ..     125     175 .. 0.76

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.019
         DZR 28 edrCpsCgekvdpearfCpeC 48
                +++C+ C ++   e+ +Cp+C
  EPX74284.1 46 HTFCSYCIRDYLREHPICPAC 66
                566666666666666666666 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.18
         DZR  28 edrCpsCgekvdpe 41 
                   +Cp C ++v++ 
  EPX74284.1 150 LVVCPVCAREVSQS 163
                 56788888887654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1055  (0.0588432); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        76  (0.00423894); expected 17.9 (0.001)
Passed Fwd filter:                        27  (0.00150594); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              27  [number of targets reported over threshold]
# CPU time: 0.54u 0.31s 00:00:00.85 Elapsed: 00:00:00.48
# Mc/sec: 2128.22
//
Query:       EPX74285.1  [L=209]
Description: DNAJ protein Spf31 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-14   54.0   0.1    3.1e-14   52.9   0.1    1.7  1  DnaJ      DnaJ domain
  ------ inclusion threshold ------
        1.1    9.1   6.0        1.5    8.7   6.0    1.2  1  Noggin    Noggin
        6.6    5.7  12.7        7.4    5.6  12.1    1.4  1  Atg14     Vacuolar sorting 38 and autophagy-related subunit 1


Domain annotation for each model (and alignments):
>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.9   0.1   5.1e-18   3.1e-14       1      63 []      31      93 ..      31      93 .. 0.96

  Alignments for each domain:
  == domain 1  score: 52.9 bits;  conditional E-value: 5.1e-18
                HHHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHHHHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ  1 dyYeiLgvskdasedeIkkaYrklalkyHPDknpkdpeaeekFkeineAyevLsdpekRkqYD 63
                + Y++Lg+ +  + d+I + Yrk++l++HPDkn+++p+a+++F+ +++A + L +++ R + D
  EPX74285.1 31 NAYDVLGILPGITVDDIDNLYRKKSLMIHPDKNRENPKAADAFNFLKKAQSDLHNENLRDSLD 93
                68******************************************************9998766 PP

>> Noggin  Noggin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   6.0   0.00025       1.5      46     147 ..      79     189 ..      64     199 .. 0.68

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00025
      Noggin  46 kekdlneteLraklgskfdpnflsvsaPeeeklsgae.eleeldaklrlkatga......lpkeikkldlkealkkg.kkkklskklrrklq.qwlwsy 135
                  ++dl++++Lr  l s + +    + a ++ k  ++e + ee    lr ++          ++  ++l+l+++++++ kk +++k ++r+++   +w+ 
  EPX74285.1  79 AQSDLHNENLRDSLDSAYTTARNQLIAEKKLKWDSEEvKSEEFLFDLRIRWRDIliedeiARRRARQLELSYQQREQaKKDEETKDRKRRMEsDKVWEE 177
                 578***************98877776666555433330333333344444443321111145566888988777665356666666777776268**** PP

      Noggin 136 taCpvlytWkdL 147
                 t    +++W+d 
  EPX74285.1 178 TRDERVNNWQDY 189
                 **********95 PP

>> Atg14  Vacuolar sorting 38 and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6  12.1    0.0012       7.4      21     103 ..     119     203 ..      96     206 .. 0.82

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0012
       Atg14  21 perlyelrerlaklksekeslkkkiekalegkeeaeqle..dkiknkkakleelksliadlrerlqelkdklsqlkkeieekkkk 103
                 +e l++lr+r +++++e e  +++  +++ + ++ eq++  ++ k +k ++e+ k + +   er+++ +d l++ kk++ +kk+k
  EPX74285.1 119 EEFLFDLRIRWRDILIEDEIARRRARQLELSYQQREQAKkdEETKDRKRRMESDKVWEETRDERVNNWQDYLHKTKKSTIKKKNK 203
                 77899*******************9988777775555540055667788999***************************999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2312  (0.128953); expected 358.6 (0.02)
Passed bias filter:                      569  (0.0317363); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 1603.77
//
Query:       EPX74286.1  [L=434]
Description: anp family mannosyltransferase complex subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   8.6e-106  353.2   0.0   1.2e-105  352.7   0.0    1.2  1  Anp1         Anp1
  ------ inclusion threshold ------
       0.14   12.8   0.1       0.44   11.2   0.1    1.8  1  U1snRNP70_N  U1 small nuclear ribonucleoprotein of 70kDa MW N


Domain annotation for each model (and alignments):
>> Anp1  Anp1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  352.7   0.0  1.4e-109  1.2e-105       3     263 ..      79     341 ..      77     342 .. 0.96

  Alignments for each domain:
  == domain 1  score: 352.7 bits;  conditional E-value: 1.4e-109
        Anp1   3 ekydlnklestada..aenkekvLiltplrdaekflpeyfenllkltyphelidLaflvsdtsegdktlealeeelkklqkkkkk.krfrsitilekdf 98 
                 ++ydl++l + + +   +++ ++Li+ plr+a+++l ++fe+l +l+yph+lidLafl+sdt+  d+t ++l+++l+ +qk+++   +f+s  i+ kdf
  EPX74286.1  79 KEYDLRDLMNVKFTgdYSKSGHILICAPLRNARDHLGMFFEHLRNLSYPHHLIDLAFLISDTN--DDTYDSLKSKLEIIQKDDDPkMHFNSAVIYLKDF 175
                 678888877766332378899******************************************..***************988889************* PP

        Anp1  99 gekisqsesdrhkvevqklRRklmaraRNsLlssaLkpehswvlwlDaDivetpktliedlishdkdvivpnvlrklpdele.keqpYDlnsWveseea 196
                 g+ ++q++sdrh +++q++RRklmaraRN+Lls+aLkp+hswv+w+D+D+++ p+t++edl++hdkdvivpnv+r+lpd+ + +eq+YDlnsW ese+a
  EPX74286.1 176 GALVGQEFSDRHGFAAQGPRRKLMARARNWLLSAALKPYHSWVYWRDVDVETAPRTILEDLMRHDKDVIVPNVYRPLPDWFGtTEQAYDLNSWSESETA 274
                 *********************************************************************************977*************** PP

        Anp1 197 lelakkldeddvivegyaelatkrvhlaklrdengdpeeeveLDgVGgvsilvkaevfrqGamFpaf 263
                 l+la++lded vivegyae+at+r+hla+lrd+ngdp+ e++LDg+Ggvsi+ ka+++ +G++Fpaf
  EPX74286.1 275 LQLAETLDEDAVIVEGYAEYATWRPHLAYLRDPNGDPNFEMSLDGIGGVSIMSKAKIYFEGCHFPAF 341
                 ******************************************************************9 PP

>> U1snRNP70_N  U1 small nuclear ribonucleoprotein of 70kDa MW N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   4.9e-05      0.44      14      90 ..     298     418 ..     296     420 .. 0.61

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 4.9e-05
  U1snRNP70_N  14 rpplpylppldydpekrktkkkitGvaafl..selke............................................deeeqeppektetkeek 65 
                  rp l yl++ + dp+ + +   i Gv+ +   +                                                ++ ++++  + e ++e+
   EPX74286.1 298 RPHLAYLRDPNGDPNFEMSLDGIGGVSIMSkaK---IyfegchfpafsferhaetegfgkmakrmgfsvvglphyviwhiyEPSDEDKVIMAEMERER 392
                  566666666666666544422344443322320...12333444444444455555566666666666667777777766667788888999****** PP

  U1snRNP70_N  66 kererkekke.kkeekleealeeydP 90 
                  kere++e+++ +++ ++++a + y++
   EPX74286.1 393 KEREAAEREAeAQAHRAQSATQRYND 418
                  ****9998751567788999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (434 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       873  (0.0486921); expected 358.6 (0.02)
Passed bias filter:                      599  (0.0334096); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 3286.72
//
Query:       EPX74287.1  [L=768]
Description: dihydropteroatesynthase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridinediphosphokinase/dihydroneopterinaldolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.2e-76  257.7   0.0    1.8e-76  257.1   0.0    1.3  1  Pterin_bind  Pterin binding enzyme
      9e-35  119.6   0.0    1.1e-19   71.1   0.0    2.6  2  FolB         Dihydroneopterin aldolase
    1.3e-32  112.7   0.0    3.4e-32  111.3   0.0    1.8  1  HPPK         7,8-dihydro-6-hydroxymethylpterin-pyrophosphokin
  ------ inclusion threshold ------
      0.035   13.6   0.2        0.2   11.1   0.1    2.2  2  PEP_mutase   Phosphoenolpyruvate phosphomutase


Domain annotation for each model (and alignments):
>> Pterin_bind  Pterin binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  257.1   0.0     4e-80   1.8e-76       1     244 []     502     748 ..     502     748 .. 0.97

  Alignments for each domain:
  == domain 1  score: 257.1 bits;  conditional E-value: 4e-80
                  EEEEETTTTTCHCCHHCTHHHHHHHHHHHHHHTT-SEEEEESS-TSTT--CCHHHHHHHHHHHHHHHHHHHC.TSEEEEE-S-HHHHHHHHHTTSEEE CS
  Pterin_bind   1 mgilNvtpdsfsdggkfedldkalaqarkmveeGAdilDiggestrPgaervdeeeelervvpvlealrdea.dvpisiDttkaevaeaAlkagadiv 97 
                  mgi+N+tpdsfsdg  +  l+++++++++mve+GA+i+Digg+strP+a++v+  ee++rvvp + a+r+   d+pis+Dt+++eva++A++aga+i+
   EPX74287.1 502 MGIINITPDSFSDGFSV-TLNNVVEVVNEMVENGASIIDIGGQSTRPHATPVSLSEEINRVVPAIYAIRNAGiDIPISVDTFEVEVAKEAINAGANII 598
                  9************9888.9***************************************************888************************* PP

                  EETTTTSSSTTHHHHHHHHT-EEEEESECSSTTTHCCCCCCCSSHHHHHHHHHHHHHHHHHHTT--GGGEEEETTTTSSTTHHHHHHHHHTHHHHHHT CS
  Pterin_bind  98 NdvsgeerdpkmlelvaeagaavvvmhmrgtpktmqeeegqyedvveeveaflearveaaeeaGvaperillDpgigfgkteehnlellrrldelrea 195
                  Nd++ +++ p+ml+++a+a++++++mh+rgtp+tm+  + +++d+v+ev  +l++rv aa +aG+++ +i+lDpg+gf+k+  ++ +ll+++++l ++
   EPX74287.1 599 NDITSGKKCPDMLSFAAKAEVPICLMHTRGTPQTMNSLSTYEKDIVQEVFEELNERVCAAIKAGIPRYNIILDPGFGFAKKIGQSTYLLHKFEQLVNK 696
                  ***********************************************************************************************555 PP

                  TS...SEBEEEGTTGHHHHHHHCTTCHGHHHHHHHHHHHHHHHTT-SEEEES CS
  Pterin_bind 196 le...vpvllGvSrksflgrllelgkaeeRdagtaaflalaaaaGadivrVh 244
                   e   +++l G Srk f+g   ++ ++++R +gtaa++++++ +Ga+i+rVh
   EPX74287.1 697 PEfmdLQWLSGPSRKGFTGHYSQDVEPKKRVWGTAAAVTASVLKGASIIRVH 748
                  55999***************986566*************************9 PP

>> FolB  Dihydroneopterin aldolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.8   0.0   1.6e-15   7.3e-12       2      98 ..      87     184 ..      86     192 .. 0.89
   2 !   71.1   0.0   2.3e-23   1.1e-19       2     110 ..     208     309 ..     207     310 .. 0.93

  Alignments for each domain:
  == domain 1  score: 45.8 bits;  conditional E-value: 1.6e-15
                 EEEEEEEEEEESSSHHHHHC-EEEEEEEEEEE-CHHHHHHTT.GGGSS-HHHHHHHHHHHHHSSEES-HHHHHHHHHHHHHCHSTESEEEEEEEETTS CS
        FolB   2 eikglrvpaiiGvnpeErelkQrvvvdleleldlskaaesdd.ledtvdYaelakavkelvesssfkllEalaeriaealleefpvekvevrveKpna 98 
                  +++lr +a +G +++ r + Q+v+v+l+++l+++  +e+ + l+++++Y+ ++k+v e +e+++fk l ++++ ia+a+ ++f+ +   v v+ p+ 
  EPX74287.1  87 LVQNLRANAKVGTDQWRRAASQPVEVNLRMDLNTRLNGEDNHdLKNSIHYGIASKIVLETIEKNEFKGLRNMVDMIAKACRNQFEFRDFFVNVRLPKK 184
                 589***************************9999888754445*******************99****************999999997777776665 PP

  == domain 2  score: 71.1 bits;  conditional E-value: 2.3e-23
                 EEEEEEEEEEESSSHHHHHC-EEEEEEEEEEE-CHHHHHHTTGGGSS-HHHHHHHHHHHHHSSEES-HHHHHHHHHHHHHCHSTESEEEEEEEETTSSS CS
        FolB   2 eikglrvpaiiGvnpeErelkQrvvvdleleldlskaaesddledtvdYaelakavkelvesssfkllEalaeriaealleefpvekvevrveKpnapi 100
                 +i +l++ +iiG++p+Er++kQr+ +d+++++        d+  d++   +l+++v  +vesssf ++Eal++++++ l+ + +v+ v+++ eKp+a i
  EPX74287.1 208 RIFDLELATIIGIHPFERKEKQRLGIDISFNV------GGDKEFDSLAISDLCHEVASFVESSSFLTIEALVHKLSKFLCFSQSVDCVHIKAEKPSA-I 299
                 7889**************************77......67777899***************99****************76666*************.6 PP

                 TCESEEEEEE CS
        FolB 101 gaadavgvei 110
                 ++ada++v+i
  EPX74287.1 300 TFADAPAVQI 309
                 88******98 PP

>> HPPK  7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.3   0.0   7.5e-36   3.4e-32       1     110 [.     333     459 ..     333     461 .. 0.94

  Alignments for each domain:
  == domain 1  score: 111.3 bits;  conditional E-value: 7.5e-36
                 EEEEEE-SSSHHHHHHHHHHHHHH....EEEEE---EEE--S...SS-GEEEEEEEEEESS-HHHHHHHHHHHHHHTT--C..STS-BS-EEEEEEET. CS
        HPPK   1 ylalGsNlgdreanleealealee....kvvkvSslyetepv...dqpdFlNavvevetelspeellealkeiEkelgrer..rwgpRtlDlDillyg. 89 
                 y+++GsN+g+r +n+++al+ ++e    ++++vS+lyet+p+   +q+ F+N v++++t+lsp +ll+a++++E++lgr +  ++gpR +DlDi +y+ 
  EPX74287.1 333 YISFGSNVGSRIKNIATALKCFSEiediTLLDVSPLYETKPMyyeNQSLFMNGVCKIQTRLSPFNLLRACQSVEQKLGRIKliDKGPRCIDLDIAMYDd 431
                 89*****************999777656678***********9876899*******************************87679************** PP

                 .......EEES-TTGGG-HHHHHHHHHH CS
        HPPK  90 .......ltlPhprlaeraFvlvplael 110
                        lt+Ph  + er+Fvl+pl+ l
  EPX74287.1 432 ciyesedLTIPHVGMLEREFVLRPLIAL 459
                 *************************987 PP

>> PEP_mutase  Phosphoenolpyruvate phosphomutase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.26   1.2e+03     114     155 ..     150     192 ..     105     204 .. 0.69
   2 ?   11.1   0.1   4.4e-05       0.2      76     205 ..     512     631 ..     505     647 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.26
  PEP_mutase 114 rqlldieefaekiaaaraaaeeag.fvinARtdalllsagagl 155
                 +++  ++++++ ia+a +++ e   f++n R    +l+ ++gl
  EPX74287.1 150 NEFKGLRNMVDMIAKACRNQFEFRdFFVNVRLPKKVLRSRSGL 192
                 3455778899999988888777667****99866555444444 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 4.4e-05
  PEP_mutase  76 ledGygespeevaetvrrliaaGvvgvniEDkkkndaerqlldieefaekiaaaraaaeeagfvinARtdalllsagagleeaieRaraYaeAGAdgvf 174
                 + dG++ + ++v e v+++++ G++ + i  ++  +++ + +++ e  +++  a  a ++ag+ i   +d++           +e a+   +AGA+ + 
  EPX74287.1 512 FSDGFSVTLNNVVEVVNEMVENGASIIDIGGQS-TRPHATPVSLSEEINRVVPAIYAIRNAGIDIPISVDTFE----------VEVAKEAINAGANIIN 599
                 569**************************9993.235555566666666666666666555544444444444..........455788899*****97 PP

  PEP_mutase 175 .vpglqkdaeiaelvaavdvplnvvplkgtls 205
                  + +++k +++ +++a+ +vp+ ++ ++gt++
  EPX74287.1 600 dITSGKKCPDMLSFAAKAEVPICLMHTRGTPQ 631
                 58899999**************9999755533 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (768 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       488  (0.0272185); expected 358.6 (0.02)
Passed bias filter:                      426  (0.0237604); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.61u 0.27s 00:00:00.88 Elapsed: 00:00:00.41
# Mc/sec: 5650.67
//
Query:       EPX74288.1  [L=375]
Description: DNA polymerase delta subunit Cdc27 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.7e-37  128.7  24.5      3e-25   89.5  15.1    2.0  2  CDC27      DNA polymerase subunit Cdc27
  ------ inclusion threshold ------
      0.071   11.5   0.0        0.1   11.0   0.0    1.2  1  Orbi_VP5   Orbivirus outer capsid protein VP5
       0.15   11.8   0.3       0.28   10.9   0.3    1.3  1  Phage_Nu1  Phage DNA packaging protein Nu1


Domain annotation for each model (and alignments):
>> CDC27  DNA polymerase subunit Cdc27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.6   2.8   2.1e-15   1.3e-11       3     209 ..      19     224 ..      17     231 .. 0.78
   2 !   89.5  15.1     5e-29     3e-25     289     427 .]     227     375 .]     220     375 .] 0.72

  Alignments for each domain:
  == domain 1  score: 44.6 bits;  conditional E-value: 2.1e-15
       CDC27   3 VTYrlLSrtLrVhvnqAKqmLyefveskkkkksaqlhaTYlvsGrkaqneetask..............ivLvreedLeeakskletvtSvhiYsvqka 87 
                 VT  +LS  L++ v+ A+  L +f+e++      ql+  Y++ G+ ++  +  +               ++L++ e L +++s++e+     iY ++++
  EPX74288.1  19 VTETVLSLSLKIPVQDAQNYLKAFYEEN-----DQLYPVYIIHGVPKDPTSLVDLdsesdslssdfltqYALATKESLPDVCSQFEEGYKTQIYALSAN 112
                 77789*******************9753.....59*************9977666999***************************************** PP

       CDC27  88 llkDsnvLydvdydilkenkkndskdslirgaqagpivnkevkraeel..grpplaapaseakektangkkpkaakekaaketssakseskkksaeksk 184
                 ++ D   L  + y++  +    d  ++++++  +g i n++ + ++ +  ++    +++++++ k  +++         +k+++s+++++ + + ++s+
  EPX74288.1 113 RVVDFDELLPIIYNLRGN----DAIYQKEQCEIYGFIHNENSRPRNLKtkAI--SHSAKAPPSVKKEPSEV------DLKKSKTSSSNMFRNVKPSNSR 199
                 **************9988....99*****************99888652322..22233333333444432......3455566666666666666677 PP

       CDC27 185 daskettkekaekaasskaaslkkk 209
                 ++s+ +++ +  +  s+ a  ++k+
  EPX74288.1 200 KNSTDSKASADSENKSVPAGFSRKS 224
                 7776666666666666666555554 PP

  == domain 2  score: 89.5 bits;  conditional E-value: 5e-29
       CDC27 289 erekekekrkrlkkmmeDededdemedvpespvateeeetseppvl.........lkeevekeevtesgdgrrRkrrkVlKkktikDeeGylVtekvye 378
                 + ++ +++  +lk +m+ +d  d + ++  s  +++    +ep+            +  +++e++t  ++gr+R++rkV+  +t  D+eG+l+t+++++
  EPX74288.1 227 QTNQLRKENDDLKSIMDMDDSHDSIDEARKSA-TSAAVSHEEPESIdiesnrpstDTSPEAQETITSISNGRKRGKRKVTNTVTTHDDEGFLITKEEQA 324
                 33445566889*****9888888788888887.3333333444333456666555455555666666666***************************** PP

       CDC27 379 wESfsedEeeppvkkkpaeskkas.aaaakkak..apkkkkQssimSFFgkK 427
                 wESfsedE+e ++k++pa ++kas + + kk+   ++ + +Q+simSFFgkK
  EPX74288.1 325 WESFSEDENE-KPKQAPAPKTKASnPPVRKKSGpqQGGNRQQKSIMSFFGKK 375
                 **********.77777777777662445554445577788899********9 PP

>> Orbi_VP5  Orbivirus outer capsid protein VP5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   1.7e-05       0.1      57     133 ..      69     150 ..      54     185 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 1.7e-05
    Orbi_VP5  57 esygesvkqavll.nvlgtgeelpdplspgergmqtkikeledeqr...nelvrlkynkeite.kfgkelgevydfmngeak 133
                 +s  +s+    l    l t e lpd  s  e g +t+i  l  ++    +el+ + yn    +  + ke  e+y f+  e  
  EPX74288.1  69 DSESDSLSSDFLTqYALATKESLPDVCSQFEEGYKTQIYALSANRVvdfDELLPIIYNLRGNDaIYQKEQCEIYGFIHNENS 150
                 555566665555414799***********************98764233899******876651689*********988865 PP

>> Phage_Nu1  Phage DNA packaging protein Nu1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.3   4.7e-05      0.28      53     100 ..     222     269 ..     218     283 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 4.7e-05
   Phage_Nu1  53 rdaeieneklrkeveelraaaeadldpgtieyerrrlikaqadaqelk 100
                 r++e++ ++lrke ++l++  + d    +i++ r+  + a    +e +
  EPX74288.1 222 RKSELQTNQLRKENDDLKSIMDMDDSHDSIDEARKSATSAAVSHEEPE 269
                 788999*********************************999988865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (375 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1319  (0.073568); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 2778.19
//
Query:       EPX74289.1  [L=678]
Description: pre-rRNA processing protein Esf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.7e-15   54.1  14.1    1.4e-13   50.4   1.3    3.7  3  NUC153    NUC153 domain


Domain annotation for each model (and alignments):
>> NUC153  NUC153 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.2   0.2   0.00024       4.4       1      13 [.      21      33 ..      21      34 .. 0.95
   2 !    3.6   1.4    0.0032        58       1      13 [.      46      58 ..      46      59 .. 0.95
   3 !   50.4   1.3   7.8e-18   1.4e-13       1      28 [.     598     625 ..     598     626 .. 0.96

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.00024
      NUC153  1 DpRFkalFedhdF 13
                DpRF+ ++ d+ F
  EPX74289.1 21 DPRFQSVHSDPRF 33
                9**********99 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.0032
      NUC153  1 DpRFkalFedhdF 13
                D+RFk l +d+dF
  EPX74289.1 46 DERFKSLKDDKDF 58
                9***********9 PP

  == domain 3  score: 50.4 bits;  conditional E-value: 7.8e-18
      NUC153   1 DpRFkalFedhdFaIDptspeFkktnpm 28 
                 DpRF al+ +h+FaIDpt+p+Fkkt+ +
  EPX74289.1 598 DPRFEALYSNHNFAIDPTNPHFKKTKTT 625
                 9************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (678 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2351  (0.131128); expected 358.6 (0.02)
Passed bias filter:                      554  (0.0308997); expected 358.6 (0.02)
Passed Vit filter:                       131  (0.0073066); expected 17.9 (0.001)
Passed Fwd filter:                        40  (0.00223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.15u 0.40s 00:00:01.54 Elapsed: 00:00:00.57
# Mc/sec: 3594.94
//
Query:       EPX74290.1  [L=196]
Description: phosphatidyl-N-methylethanolamine N- methyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-29  102.8   2.0    2.3e-29  101.9   2.0    1.5  1  PEMT      Phospholipid methyltransferase
  ------ inclusion threshold ------
      0.085   12.7   0.4      0.085   12.7   0.4    2.0  3  YrhK      YrhK-like protein


Domain annotation for each model (and alignments):
>> PEMT  Phospholipid methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.9   2.0   2.5e-33   2.3e-29       4     105 ..      87     187 ..      84     188 .. 0.96

  Alignments for each domain:
  == domain 1  score: 101.9 bits;  conditional E-value: 2.5e-33
        PEMT   4 ilGlllialglllvlssiealgefgtfygdfFlelmdklvtsGiYrylnnPeyvgstlgflGlaLitgsaaglllallvllvylialkfvEephlakiY 102
                 ++  +l+ +g +lvlss+++lg+ gt++gd+F+ l +++v+++++++++nP+y gst++f+ +aL +g++aglll+l v+lvy +al  +Eep++akiY
  EPX74290.1  87 FVSKVLFYVGSILVLSSMYKLGIVGTYLGDYFGFLLPARVSGFPFNVTENPMYNGSTICFFSTALRYGKPAGLLLSLEVFLVYRLALM-FEEPFTAKIY 184
                 45889**********************************************************************************9.********** PP

        PEMT 103 gkr 105
                 ++r
  EPX74290.1 185 AAR 187
                 986 PP

>> YrhK  YrhK-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0      0.63   5.7e+03      10      19 ..      49      58 ..      39      61 .. 0.59
   2 ?   12.7   0.4   9.5e-06     0.085       9      41 ..      84     114 ..      78     121 .. 0.84
   3 ?   -3.8   0.0       1.4   1.2e+04      23      26 ..     144     147 ..     142     155 .. 0.68

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 0.63
        YrhK 10 ndiigsllFl 19
                ++ +++++F+
  EPX74290.1 49 CYALAACIFV 58
                3444444443 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 9.5e-06
        YrhK   9 andiigsllFlvGSilflpnsefwkwqiagvwl 41 
                 ++++   +lF vGSil l++++  k+ i+g++l
  EPX74290.1  84 IVQFVSKVLFYVGSILVLSSMY--KLGIVGTYL 114
                 67788889**********5555..999999965 PP

  == domain 3  score: -3.8 bits;  conditional E-value: 1.4
        YrhK  23 ilfl 26 
                 i+f+
  EPX74290.1 144 ICFF 147
                 6777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       389  (0.0216967); expected 358.6 (0.02)
Passed bias filter:                      264  (0.0147247); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1436.86
//
Query:       EPX74291.1  [L=212]
Description: ubiquinone biosynthesis protein Coq7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.3e-72  241.2   0.0      6e-72  241.0   0.0    1.0  1  COQ7      Ubiquinone biosynthesis protein COQ7
  ------ inclusion threshold ------
      0.029   13.2   0.0      0.043   12.6   0.0    1.2  1  MtaB      Methanol-cobalamin methyltransferase B subunit


Domain annotation for each model (and alignments):
>> COQ7  Ubiquinone biosynthesis protein COQ7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  241.0   0.0   6.7e-76     6e-72       2     171 ..      39     211 ..      38     212 .] 0.98

  Alignments for each domain:
  == domain 1  score: 241.0 bits;  conditional E-value: 6.7e-76
        COQ7   2 ldrllRvdhaGElgAvaiYkgqlavlakkdpelkpllkemleqEkeHlatfeellkerrvrpslllplwkvagfalGaltallGkeaamacteavEtvi 100
                 ld+++Rvd+aGElgA++iYkgq+++l+ +dp++ p++++m++qEk+Hl+tf++++ e+rvrp+ll+p+w+vagfalGa+tallG++aamacteavEt+i
  EPX74291.1  39 LDQVIRVDQAGELGANQIYKGQYFILQFTDPKVAPTIQHMWDQEKHHLKTFDNYILENRVRPTLLRPFWDVAGFALGAGTALLGTKAAMACTEAVETAI 137
                 79************************************************************************************************* PP

        COQ7 101 geHYneqlreleelee..eedkelleiikqfrddEleHldtAven.daekapaykllsaviklgcrvaiavaer 171
                 g HYn+qlr+  +l++  +e+++l++ +++frddEleHl+tAv+  +a++apa+ ll+++i++gc++ai++++r
  EPX74291.1 138 GGHYNDQLRDTVHLNDaaPELEKLRDDLAEFRDDELEHLNTAVDDwNAKEAPAHGLLNNAIQAGCQAAIWLCKR 211
                 **********998887889************************9989999**********************99 PP

>> MtaB  Methanol-cobalamin methyltransferase B subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   4.8e-06     0.043     393     458 ..     123     187 ..     114     188 .. 0.93

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 4.8e-06
        MtaB 393 kaaalkaielleeaveekklklskfekkaLdkakkelealpddedkFikeclkkykkevkkfkpen 458
                  +aa++++e +e+a+  ++ + + +++  L++a  ele+l dd  +F ++ l+++++ v+++++++
  EPX74291.1 123 TKAAMACTEAVETAI-GGHYNDQLRDTVHLNDAAPELEKLRDDLAEFRDDELEHLNTAVDDWNAKE 187
                 6799*********99.89999999**************************************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       672  (0.0374812); expected 358.6 (0.02)
Passed bias filter:                      587  (0.0327403); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 1449.97
//
Query:       EPX74292.1  [L=135]
Description: DNA-directed RNA polymerase II complex subunit Rpb4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.7e-21   75.7   0.1    4.6e-21   75.4   0.1    1.1  1  RNA_pol_Rpb4  RNA polymerase Rpb4


Domain annotation for each model (and alignments):
>> RNA_pol_Rpb4  RNA polymerase Rpb4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.4   0.1   2.6e-25   4.6e-21       1     122 [.      24     130 ..      24     131 .. 0.94

  Alignments for each domain:
  == domain 1  score: 75.4 bits;  conditional E-value: 2.6e-25
                   EE-HHHHHHHHHHHHHHHHCHHHHHTCCCCCHHSHCHTCHHCHHHHHHHHHHHCTHHTTSSHHHHHHHHHHHTTSTSTHHHHHHHHHCSTSSHHHHH CS
  RNA_pol_Rpb4   1 lLsnsEvllvlkeeleerknkdkkeseddkisekeevkgnlnkilkktleyltnkfsrlkneekfnelvellksfeLtkaEklqlvnlkPesavelk 97 
                   +L+ sE++ ++   +++r +++             +++  ++ ++kktl+y +  f r+k++e+  ++ + l +  ++k E++ql++l++e+a+e++
    EPX74292.1  24 MLTVSEAKILIDTVMAQRTREA-------------NAEIPMTDVMKKTLSYFNV-FGRFKTAESTYACERILGN-RFHKYERAQLGTLCCEDAEEAR 105
                   699*********9999997774.............67899*************9.*****************99.59******************** PP

                   HHSTTGTTTSTSHHHHHHHHHHHHH CS
  RNA_pol_Rpb4  98 tlieeleerfedeqleeiLdelkev 122
                   tli++l ++++de l+ iLdel+++
    EPX74292.1 106 TLIPSLSNKIDDESLQGILDELSTL 130
                   **********************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       403  (0.0224776); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 991.72
//
Query:       EPX74293.1  [L=304]
Description: Gtr1/RagA G protein Gtr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   1.9e-100  335.0   0.4   2.3e-100  334.7   0.4    1.1  1  Gtr1_RagA     Gtr1/RagA G protein conserved region
    3.3e-09   37.0   0.0    1.8e-08   34.6   0.0    2.1  2  Roc           Ras of Complex, Roc, domain of DAPkinase
    3.6e-08   33.5   0.0    7.6e-08   32.4   0.0    1.6  1  MMR_HSR1      50S ribosome-binding GTPase
    4.1e-08   33.0   0.5    9.5e-08   31.8   0.0    1.9  3  Ras           Ras family
    1.7e-06   27.6   0.0      3e-06   26.8   0.0    1.5  1  Arf           ADP-ribosylation factor family
    0.00026   20.6   0.0    0.00039   20.0   0.0    1.4  1  GTP_EFTU      Elongation factor Tu GTP binding domain
     0.0026   17.0   0.4      0.014   14.6   0.4    2.1  1  DUF815        Protein of unknown function (DUF815)
     0.0061   16.5   1.0        1.7    8.6   0.1    2.4  2  RsgA_GTPase   RsgA GTPase
  ------ inclusion threshold ------
      0.062   13.0   0.2       0.13   12.0   0.2    1.5  1  AAA_29        P-loop containing region of AAA domain
      0.074   13.6   0.0       0.14   12.7   0.0    1.6  1  ABC_tran      ABC transporter
      0.099   11.8   4.6        1.4    8.0   0.0    2.5  3  G-alpha       G-protein alpha subunit
       0.11   12.6   0.2       0.36   10.9   0.0    1.9  2  MMR_HSR1_Xtn  C-terminal region of MMR_HSR1 domain


Domain annotation for each model (and alignments):
>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  334.7   0.4  1.5e-103  2.3e-100       1     232 []       4     232 ..       4     232 .. 0.99

  Alignments for each domain:
  == domain 1  score: 334.7 bits;  conditional E-value: 1.5e-103
   Gtr1_RagA   1 kvLLmGksgsGKtsmrsiiFdnylardtlrlgatidveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDvesreleedletlk 99 
                 kvLLmG+sgsGK+smrsi+F+ny+a++t+rlgatid+e+s+vrflgnl+lnlwDcgGqeaf+e+yls q+++ifrnv+vliyVfDvesre+e+dl t++
  EPX74293.1   4 KVLLMGRSGSGKSSMRSIVFSNYVAKNTRRLGATIDIEHSHVRFLGNLVLNLWDCGGQEAFMENYLSAQRDHIFRNVQVLIYVFDVESREFERDLVTFR 102
                 8************************************************************************************************** PP

   Gtr1_RagA 100 eilealrqyspeakvfvlihKmDliqedereeifeerkeeireeieklekeeiqffaTSiwdeslykAfssivqklipnldvleelLkklaeaieaeev 198
                 ++lea   +sp+a+vf+lihKmDl+qed r+ +feerk+ + e++++l+   +++ aTSiwde+l+kA+s iv++lipn+++le++L+++++a+ea+ev
  EPX74293.1 103 NCLEATIANSPQARVFCLIHKMDLVQEDLRDLVFEERKAILLEASKELN---TTCLATSIWDETLFKAWSAIVYTLIPNTPTLESHLREFCKAAEAAEV 198
                 ************************************************9...99********************************************* PP

   Gtr1_RagA 199 lLferstflviatvsskeaeekdasrfekvseii 232
                 +Lfer+tflvi+++ss e+ + d++rfek+s+i+
  EPX74293.1 199 VLFERTTFLVISSYSSDETVAVDTHRFEKISNIV 232
                 ********************************97 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.6   0.0   1.2e-11   1.8e-08       1     119 [.       4     125 ..       4     126 .. 0.68
   2 ?   -0.6   0.0      0.96   1.4e+03      45      90 ..     233     277 ..     207     302 .. 0.53

  Alignments for each domain:
  == domain 1  score: 34.6 bits;  conditional E-value: 1.2e-11
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTT.....TT-HHHHCTSCEEEEEEE..GHHH CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfr.....slhplylreaalailvyd..srss 92 
                 Kv+l+G sg+GK+s+ + + ++ +  k++  +g+++  ++  +++       + ++ ln+WD +Gqe f      + +++ +r+ +++i+v+d  sr++
  EPX74293.1   4 KVLLMGRSGSGKSSMRSIVFSNYV-AKNTRRLGATIDIEHS-HVRF------LGNLVLNLWDCGGQEAFMenylsAQRDHIFRNVQVLIYVFDveSREF 94 
                 99************9777665555.5666778888765543.4444......34689**********997333324578999***********765554 PP

                 .HCHHHHHHHHHHH...CSSS-EEEEEE-TT CS
         Roc  93 .enlkeWlkelkkv...agkspvilvgnkiD 119
                  ++l +  + l++    ++++ v++++ k+D
  EPX74293.1  95 eRDLVTFRNCLEATianSPQARVFCLIHKMD 125
                 2455555555555511045556777778887 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.96
                 GGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEEGH CS
         Roc  45 kgvendkkvkkvklniWDtaGqerfrslhplylreaalailvydsr 90 
                 k+++ + ++ + ++  + + G  +f++    y ++  +++++ d +
  EPX74293.1 233 KQFKLSCSKMQAQFTTFELRGG-NFSAFIVPYTEDTYILVVIADPE 277
                 3334333334455666666664.36666666777776666666633 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.4   0.0   5.1e-11   7.6e-08       1     102 [.       4     106 ..       4     125 .. 0.75

  Alignments for each domain:
  == domain 1  score: 32.4 bits;  conditional E-value: 5.1e-11
                 EEEEEESTTSSHHHHHHHHHTS.TEEESSSTTSSSSEEEEEEEETT.EEEEEEECGGCSSHHHHHHHHHHHHHHHHC.TSEEEEEEETTTTCSHHHHHH CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltge.kaivsdkpgtTrdinegrvklkg.keielvDtpGliegaseekglgkaflalee.adlillvvdaseeklkpldee 96 
                 +v+++Gr+ +GKS++ +  + + +a+ +++ g+T+di++ +v++ g   ++l+D+ G  e a  e+ l+ +   + + ++++++v+d+++++++++  +
  EPX74293.1   4 KVLLMGRSGSGKSSMRSIVFSNyVAKNTRRLGATIDIEHSHVRFLGnLVLNLWDCGG-QE-AFMENYLSAQRDHIFRnVQVLIYVFDVESREFERDLVT 100
                 589*************99999989*******************5554889*******.54.3333433333333323489*******886667666666 PP

                 HHHHHH CS
    MMR_HSR1  97 leelle 102
                 + ++le
  EPX74293.1 101 FRNCLE 106
                 666664 PP

>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.8   0.0   6.4e-11   9.5e-08       1     119 [.       4     131 ..       4     170 .. 0.69
   2 ?   -2.9   0.0         3   4.5e+03      85     103 ..     223     241 ..     218     248 .. 0.76
   3 ?   -2.7   0.0       2.6   3.9e+03      81     142 ..     278     297 ..     255     303 .. 0.52

  Alignments for each domain:
  == domain 1  score: 31.8 bits;  conditional E-value: 6.4e-11
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEET.TEEEEEEEEEETTSGGG.....HHHHHHHHTTESEEEEEEETTBHHHHHTHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievd.gkevkleiwDTAGqeef.....kslrelyyrdaegillvyditsresfenvkkw 93 
                 K++l+G s+ GK+s+     ++ +  + +  +g+   +++ +v+   ++ l++wD  Gqe f     ++ r+  +r++++++ v+d++sre  +++ ++
  EPX74293.1   4 KVLLMGRSGSGKSSMRSIVFSN-YVAKNTRRLGATIDIEHSHVRfLGNLVLNLWDCGGQEAFmenylSAQRDHIFRNVQVLIYVFDVESREFERDLVTF 101
                 89***********986544444.444444444444444444444345678**********9944333457899****************9977777777 PP

                 HHHHHHHST..TTSEEEEEEETTTGGG..G CS
         Ras  94 veeikrvae..envpivLvGnKvDlee..k 119
                  + ++ +     +  +  +  K+Dl +   
  EPX74293.1 102 RNCLEATIAnsPQARVFCLIHKMDLVQedL 131
                 777776665443455556668899877451 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 3
                 HHHHTHHHHHHHHHHHSTT CS
         Ras  85 esfenvkkwveeikrvaee 103
                 + fe+++++v+++k  +++
  EPX74293.1 223 HRFEKISNIVKQFKLSCSK 241
                 5689999999998888874 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 2.6
                 TTBHHHHHTHHHHHHHHHHHSTTTSEEEEEEETTTGGGG-SS-HHHHHHHHHHHTSEEEEEB CS
         Ras  81 itsresfenvkkwveeikrvaeenvpivLvGnKvDleekravsteegeelakelglkfletS 142
                 i+s++++ n+++  +                                           +etS
  EPX74293.1 278 IESAATLMNIQSARRY------------------------------------------IETS 297
                 4444444444444433..........................................3333 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.0     2e-09     3e-06      15     129 ..       3     128 ..       1     161 [. 0.73

  Alignments for each domain:
  == domain 1  score: 26.8 bits;  conditional E-value: 2e-09
                 EEEEEEESTTSSHHH....HHHHHHHSSCEECSSSSSEEEEEEEE.TTEEEEEEEE-SSGGGGGGG.....GGGCTTESEEEEEEETT-CT..T.HHHH CS
         Arf  15 lrilllGLDnaGKtT....ilkklkleelvttvPTigfnveelei.knlkftvwDvGGqeklRplW.....knYfektdavifvvDsadre..R.leea 100
                  ++ll+G  ++GK+     +  ++  +++ +   Ti  +  ++++  nl +++wD GGqe   + +     ++ f++++++i+v D+  re  R l + 
  EPX74293.1   3 KKVLLMGRSGSGKSSmrsiVFSNYVAKNTRRLGATIDIEHSHVRFlGNLVLNLWDCGGQEAFMENYlsaqrDHIFRNVQVLIYVFDVESREfeRdLVTF 101
                 589**********8633325678888888889999999999998769************986554423333789**********998877533336666 PP

                 HHHHHHHCTSGCCTTSEEEEEEE-TTSTT CS
         Arf 101 keeLkalleeeelkevallvlaNKqDlpe 129
                 ++ L+a ++++  ++v  l+   K+Dl +
  EPX74293.1 102 RNCLEATIANSPQARVFCLI--HKMDLVQ 128
                 66777766666666555555..6777765 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   2.6e-07   0.00039      47     154 ..      29     178 ..       8     253 .. 0.72

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 2.6e-07
                 HHHHHHTSCSSCEEEEEETTCSSEEEEEEEESSSGGGHHHHHHH.....HHT-SEEEEEEETTTB......STHHHHHHHHHHHHTTTEEEEEEESCGS CS
    GTP_EFTU  47 keErergiTiksaaisleketkkylinliDtPGHvdFskevirg.....lrvlDgavlvvdaveG......vepqteevlrlalkegvpiivfiNKmDr 134
                 k+ r+ g Ti++++ ++     +  +nl D+ G + F+++   +      r + + + v+d+++       v+ +    + +a++ + +++++i KmD 
  EPX74293.1  29 KNTRRLGATIDIEHSHVR-FLGNLVLNLWDCGGQEAFMENYLSAqrdhiFRNVQVLIYVFDVESReferdlVTFRNCLEATIANSPQARVFCLIHKMDL 126
                 556777999999999999.788999****************99988888899**********976666444444444445555555666********** PP

                 THHHHHHHHHHHHHHHHHH................................H CS
    GTP_EFTU 135 lkaelkeiveevkqklsrk................................e 154
                 ++++l+ +v e ++ +  +                                +
  EPX74293.1 127 VQEDLRDLVFEERKAILLEaskelnttclatsiwdetlfkawsaivytlipN 178
                 *999999988888766222344444445555555444444444444444440 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.4   9.1e-06     0.014      55     103 ..       4      56 ..       2     149 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 9.1e-06
      DUF815  55 nvLLwGarGtGKSslvkallneyaeeg....Lrlievekedlkelpklvellr 103
                 +vLL+G  G+GKSs+   ++++y +++     + i++e+++++ l +lv +l 
  EPX74293.1   4 KVLLMGRSGSGKSSMRSIVFSNYVAKNtrrlGATIDIEHSHVRFLGNLVLNLW 56 
                 79*************99999999988855533579*****9999999987765 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.1    0.0011       1.7     101     119 ..       4      22 ..       1      37 [. 0.79
   2 !    6.4   0.1     0.005       7.5      13      78 ..      77     153 ..      65     173 .. 0.69

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0011
                  EEEEECSTTSSHHHHHHHH CS
  RsgA_GTPase 101 tsvlvGqSGvGKStLinal 119
                   ++l+G SG GKS++   +
   EPX74293.1   4 KVLLMGRSGSGKSSMRSIV 22 
                  5789**********96655 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.005
                  EES--EEEEEEESTTTT--HHHHH..HHH..HHHHHTT-EEEEEEE-GGG--HHH.......HHHHHHHHHHHTTSE CS
  RsgA_GTPase  13 vaNvdqllivvslkepelslnlld..rfL..vlaeekgiepvivlnKiDlleeee.......eleelkeelealgye 78 
                    Nv+ l+ v+ +++ e++ +l++   +L  ++a++ ++++  ++ K+Dl++e+        +   l e+ ++l+++
   EPX74293.1  77 FRNVQVLIYVFDVESREFERDLVTfrNCLeaTIANSPQARVFCLIHKMDLVQEDLrdlvfeeRKAILLEASKELNTT 153
                  569999999*********9998864255633456777889999*********9885664443333334444445555 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.2   8.9e-05      0.13      24      38 ..       4      18 ..       1      20 [. 0.86

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 8.9e-05
      AAA_29 24 atlltGpsGsGKSTl 38
                 +ll+G+sGsGKS++
  EPX74293.1  4 KVLLMGRSGSGKSSM 18
                48***********86 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   9.4e-05      0.14      12      36 ..       3      27 ..       1      93 [. 0.88

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 9.4e-05
                SEEEEEESTTSSHHHHHHHHTTSS- CS
                xxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 12 ekvaivGenGaGKStLlkllagllk 36
                +kv ++G++G+GKS++ +++  ++ 
  EPX74293.1  3 KKVLLMGRSGSGKSSMRSIVFSNYV 27
                6899***********9988877765 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.5    0.0073        11      25      39 ..       4      18 ..       1      33 [. 0.89
   2 ?    8.0   0.0   0.00092       1.4     188     234 ..      37      88 ..      23     100 .. 0.86
   3 ?   -2.8   0.1       1.8   2.7e+03     335     352 ..     217     234 ..     178     250 .. 0.64

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0073
                EEEEEESTTSSHHHH CS
     G-alpha 25 kllllGqseSGKsTi 39
                k+ll+G s+SGKs++
  EPX74293.1  4 KVLLMGRSGSGKSSM 18
                89***********96 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.00092
                 --SEEEEEEECT-TEEEEEEEE-SSHHHHHGTC.....CCTTTECEEEEEEE CS
     G-alpha 188 tvGisetkfevdsklefrivdvgGqrserkkWv.....pffddvdaiiFlvs 234
                 t+ i++ ++++  +l ++++d+gGq +  ++++     ++f +v+++i++  
  EPX74293.1  37 TIDIEHSHVRFLGNLVLNLWDCGGQEAFMENYLsaqrdHIFRNVQVLIYVFD 88 
                 78888888888669999***************99999999*********975 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 1.8
                 E-TT-HHHHHHHHHHHHH CS
     G-alpha 335 tsatdtkevqkviesvrd 352
                 t a+dt+ ++k+ + v++
  EPX74293.1 217 TVAVDTHRFEKISNIVKQ 234
                 444444444444444443 PP

>> MMR_HSR1_Xtn  C-terminal region of MMR_HSR1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00024      0.36      57     103 ..     116     162 ..      96     164 .. 0.90
   2 ?   -2.1   0.0       2.5   3.7e+03      12      31 ..     220     239 ..     212     245 .. 0.65

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00024
  MMR_HSR1_Xtn  57 pclyvlNKiDlisleeldelarepnsvviSaekelnldeLkekiwee 103
                   ++++++ K+Dl++++  d + +e++++ + a+keln   L + iw+e
    EPX74293.1 116 RVFCLIHKMDLVQEDLRDLVFEERKAILLEASKELNTTCLATSIWDE 162
                   6778999**************************************97 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 2.5
  MMR_HSR1_Xtn  12 ltkldeetvkkilkeykihn 31 
                   +++   e++++i+k++k+  
    EPX74293.1 220 VDTHRFEKISNIVKQFKLSC 239
                   44444477888888888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       617  (0.0344135); expected 358.6 (0.02)
Passed bias filter:                      426  (0.0237604); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.50u 0.30s 00:00:00.80 Elapsed: 00:00:00.45
# Mc/sec: 2008.86
//
Query:       EPX74294.1  [L=378]
Description: hypothetical protein SOCG_03504 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      1e-07   31.7  28.8    9.9e-05   22.1   1.3    4.9  5  zf-CCCH       Zinc finger C-x8-C-x5-C-x3-H type (and similar)
    0.00015   22.5  27.7       0.01   16.5   1.8    5.3  5  Torus         Torus domain
    0.00031   20.7   4.3    0.00031   20.7   4.3    6.0  5  zf_CCCH_4     Zinc finger domain
    0.00049   19.8  25.7      0.079   12.8   0.0    5.3  4  zf-CCCH_4     CCCH-type zinc finger
     0.0041   17.3   4.8     0.0041   17.3   4.8    3.8  3  zf-CCCH_3     Zinc-finger containing family
  ------ inclusion threshold ------
       0.15   11.8   7.5        0.5   10.1   0.7    3.4  3  zf-C3H1       Putative zinc-finger domain
       0.55   10.4   7.6        8.1    6.7   0.1    3.6  3  zf_CCCH_5     Unkempt Zinc finger domain 1 (Znf1)


Domain annotation for each model (and alignments):
>> zf-CCCH  Zinc finger C-x8-C-x5-C-x3-H type (and similar)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   1.3   3.9e-08   9.9e-05       4      27 .]     205     228 ..     202     228 .. 0.91
   2 ?   -1.3   0.2       0.9   2.3e+03       6      22 ..     234     249 ..     232     253 .. 0.71
   3 !   11.3   1.8   9.9e-05      0.25       4      26 ..     260     280 ..     257     281 .. 0.91
   4 !   11.5   0.2   8.6e-05      0.22       4      26 ..     287     309 ..     285     310 .. 0.92
   5 ?    4.6   1.1     0.012        32       6      25 ..     312     330 ..     311     332 .. 0.86

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 3.9e-08
                 HCBCHHHHHS--TTGGG-SSBSCS CS
     zf-CCCH   4 elCrffmrtGyCkyGdrCkFaHgq 27 
                 + Cr+++ +GyC  G++C + H++
  EPX74294.1 205 VYCRYYNSSGYCANGSSCMYLHDP 228
                 57********************85 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.9
                 BCHHHHHS--TTGGG-S CS
     zf-CCCH   6 CrffmrtGyCkyGdrCk 22 
                 C+ f+    C+ G+ C+
  EPX74294.1 234 CPKFLN-EKCSKGEMCS 249
                 666666.6799999887 PP

  == domain 3  score: 11.3 bits;  conditional E-value: 9.9e-05
                 HCBCHHHHHS--TTGGG-SSBSC CS
     zf-CCCH   4 elCrffmrtGyCkyGdrCkFaHg 26 
                 + C +f++ G C+   +C++ H+
  EPX74294.1 260 PACYYFLQ-GKCNN-VNCRYVHV 280
                 78******.*****.*******6 PP

  == domain 4  score: 11.5 bits;  conditional E-value: 8.6e-05
                 HCBCHHHHHS--TTGGG-SSBSC CS
     zf-CCCH   4 elCrffmrtGyCkyGdrCkFaHg 26 
                 ++C  f+++ yC  G +Ck  H+
  EPX74294.1 287 PICFEFAKYSYCELGTSCKEKHV 309
                 57889*****************6 PP

  == domain 5  score: 4.6 bits;  conditional E-value: 0.012
                 BCHHHHHS--TTGGG-SSBS CS
     zf-CCCH   6 CrffmrtGyCkyGdrCkFaH 25 
                 C  f+ +G+C   ++C+  H
  EPX74294.1 312 CSEFAMNGSCAN-PQCRLYH 330
                 **********99.9998666 PP

>> Torus  Torus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   1.8   3.9e-06      0.01      62      92 ..     196     227 ..     127     231 .. 0.69
   2 !    8.5   0.1    0.0013       3.3      69      96 ..     230     257 ..     227     259 .. 0.88
   3 !    7.8   1.5    0.0021       5.3      71      91 ..     260     279 ..     255     285 .. 0.85
   4 !    6.5   1.5    0.0052        13      68      93 ..     284     310 ..     280     319 .. 0.83
   5 ?    0.4   0.2      0.42   1.1e+03      71      94 ..     310     333 ..     306     350 .. 0.63

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 3.9e-06
                 -HHHHSTT--B-HHH.HHT--SSGGG-SSB-S CS
       Torus  62 tkadkekesyfClfF.arGlCakGkkCeylHr 92 
                  +  ++ +s++C ++ + G+Ca+G++C ylH+
  EPX74294.1 196 KEVGSSPSSVYCRYYnSSGYCANGSSCMYLHD 227
                 333346677888776479*************6 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0013
                 T--B-HHHHHT--SSGGG-SSB-S---S CS
       Torus  69 esyfClfFarGlCakGkkCeylHrlPte 96 
                 ++++C  F    C+kG+ C+  H+l t+
  EPX74294.1 230 RRMICPKFLNEKCSKGEMCSLSHDLDTK 257
                 5689*******************99765 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.0021
                 -B-HHHHHT--SSGGG-SSB- CS
       Torus  71 yfClfFarGlCakGkkCeylH 91 
                   C++F +G C +  +C+y+H
  EPX74294.1 260 PACYYFLQGKCNN-VNCRYVH 279
                 68*********87.79****9 PP

  == domain 4  score: 6.5 bits;  conditional E-value: 0.0052
                 TT--B-HHHHH.T--SSGGG-SSB-S- CS
       Torus  68 kesyfClfFar.GlCakGkkCeylHrl 93 
                 +++ +C+ Fa+  +C  G++C+  H l
  EPX74294.1 284 ETAPICFEFAKySYCELGTSCKEKHVL 310
                 56789*****9668********99987 PP

  == domain 5  score: 0.4 bits;  conditional E-value: 0.42
                 -B-HHHH.HT--SSGGG-SSB-S-- CS
       Torus  71 yfClfFa.rGlCakGkkCeylHrlP 94 
                   C  Fa  G Ca+  +C+ +H   
  EPX74294.1 310 LQCSEFAmNGSCAN-PQCRLYHGTL 333
                 57999994577776.6799988543 PP

>> zf_CCCH_4  Zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   4.3   1.2e-07   0.00031       1      19 []     207     226 ..     207     226 .. 0.99
   2 !    5.5   0.3     0.007        18       1      15 [.     234     248 ..     234     252 .. 0.88
   3 !    7.0   4.6    0.0025       6.3       1      19 []     262     279 ..     262     279 .. 0.82
   4 ?    0.2   1.0      0.33   8.6e+02       8      16 ..     297     305 ..     289     305 .. 0.88
   5 ?    0.7   0.1      0.24     6e+02       1      10 [.     312     322 ..     312     323 .. 0.75

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 1.2e-07
   zf_CCCH_4   1 Ckfflq.GtCkkGdkCrFaH 19 
                 C+++   G+C +G++C ++H
  EPX74294.1 207 CRYYNSsGYCANGSSCMYLH 226
                 ******************** PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.007
   zf_CCCH_4   1 CkfflqGtCkkGdkC 15 
                 C  fl+ +C+kG+ C
  EPX74294.1 234 CPKFLNEKCSKGEMC 248
                 88888889******* PP

  == domain 3  score: 7.0 bits;  conditional E-value: 0.0025
   zf_CCCH_4   1 CkfflqGtCkkGdkCrFaH 19 
                 C +flqG+C+ + +Cr+ H
  EPX74294.1 262 CYYFLQGKCN-NVNCRYVH 279
                 *********6.57777776 PP

  == domain 4  score: 0.2 bits;  conditional E-value: 0.33
   zf_CCCH_4   8 tCkkGdkCr 16 
                 +C  G++C+
  EPX74294.1 297 YCELGTSCK 305
                 899*****7 PP

  == domain 5  score: 0.7 bits;  conditional E-value: 0.24
   zf_CCCH_4   1 Ckfflq.GtCk 10 
                 C  f+  G+C 
  EPX74294.1 312 CSEFAMnGSCA 322
                 6667788***7 PP

>> zf-CCCH_4  CCCH-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   2.7   3.1e-05      0.08       3      22 .]     207     227 ..     205     227 .. 0.95
   2 !   12.8   0.0   3.1e-05     0.079       2      22 .]     233     253 ..     232     253 .. 0.97
   3 ?    4.2   4.1     0.015        40       3      21 ..     262     279 ..     260     280 .. 0.84
   4 ?    0.9   1.1      0.17   4.2e+02       6      21 ..     315     330 ..     311     331 .. 0.63

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3.1e-05
   zf-CCCH_4   3 Cpyfa.kGsCrfGdnCrFsHd 22 
                 C+y+   G C  G+ C ++Hd
  EPX74294.1 207 CRYYNsSGYCANGSSCMYLHD 227
                 *****99*************9 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 3.1e-05
   zf-CCCH_4   2 lCpyfakGsCrfGdnCrFsHd 22 
                 +Cp+f++++C  G+ C  sHd
  EPX74294.1 233 ICPKFLNEKCSKGEMCSLSHD 253
                 7*******************9 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.015
   zf-CCCH_4   3 CpyfakGsCrfGdnCrFsH 21 
                 C yf++G+C    nCr+ H
  EPX74294.1 262 CYYFLQGKCNN-VNCRYVH 279
                 88*******95.4999998 PP

  == domain 4  score: 0.9 bits;  conditional E-value: 0.17
   zf-CCCH_4   6 fa.kGsCrfGdnCrFsH 21 
                 fa +GsC   + Cr +H
  EPX74294.1 315 FAmNGSCAN-PQCRLYH 330
                 554889976.5566666 PP

>> zf-CCCH_3  Zinc-finger containing family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   3.6      0.44   1.1e+03       8      28 ..     207     228 ..     201     234 .. 0.73
   2 !   17.3   4.8   1.6e-06    0.0041       8      58 ..     234     283 ..     229     292 .. 0.85
   3 !    6.1   3.7    0.0051        13      10      60 ..     292     336 ..     284     365 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.44
   zf-CCCH_3   8 cyffyys.tctkGdscpfrhee 28 
                 c ++  s  c+ G sc + h +
  EPX74294.1 207 CRYYNSSgYCANGSSCMYLHDP 228
                 433333335*********9976 PP

  == domain 2  score: 17.3 bits;  conditional E-value: 1.6e-06
   zf-CCCH_3   8 cyffyystctkGdscpfrheeaalGsetvctlWqegrclrevckfrhmeid 58 
                 c  f   +c+kG++c+  h   +      c ++ +g+c +  c++ h++ +
  EPX74294.1 234 CPKFLNEKCSKGEMCSLSHDLDTK-RIPACYYFLQGKCNNVNCRYVHVHYS 283
                 66678899***********87665.5568******************9865 PP

  == domain 3  score: 6.1 bits;  conditional E-value: 0.0051
   zf-CCCH_3  10 ffyystctkGdscpfrheeaalGsetvctlWqegrclrevckfrhmeidkk 60 
                 f  ys c+ G sc  +h      +    ++  +g c + +c++ h  ++k+
  EPX74294.1 292 FAKYSYCELGTSCKEKHVLQ---C---SEFAMNGSCANPQCRLYHGTLEKN 336
                 556**********9999643...2...356679************999887 PP

>> zf-C3H1  Putative zinc-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.1      0.43   1.1e+03       8      20 ..     213     226 ..     207     226 .. 0.73
   2 ?   10.1   0.7    0.0002       0.5       7      21 ..     267     280 ..     262     281 .. 0.83
   3 ?    3.9   0.1     0.017        44       8      17 ..     319     327 ..     317     330 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.43
     zf-C3H1   8 GGvCnD.psCefQH 20 
                  G C +  sC + H
  EPX74294.1 213 SGYCANgSSCMYLH 226
                 45899999998888 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.0002
     zf-C3H1   7 aGGvCnDpsCefQHF 21 
                   G+Cn+ +C++ H+
  EPX74294.1 267 Q-GKCNNVNCRYVHV 280
                 4.5*********996 PP

  == domain 3  score: 3.9 bits;  conditional E-value: 0.017
     zf-C3H1   8 GGvCnDpsCe 17 
                 G  C +p+C+
  EPX74294.1 319 G-SCANPQCR 327
                 5.9******8 PP

>> zf_CCCH_5  Unkempt Zinc finger domain 1 (Znf1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0     0.018        45      11      21 ..     233     243 ..     223     245 .. 0.83
   2 ?    6.7   0.1    0.0031       8.1       8      21 ..     258     271 ..     252     278 .. 0.87
   3 ?    1.4   0.9      0.14   3.6e+02       5      16 ..     305     316 ..     302     326 .. 0.78

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.018
   zf_CCCH_5  11 qCprFlQhkCq 21 
                  Cp+Fl  kC 
  EPX74294.1 233 ICPKFLNEKCS 243
                 5*********6 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0031
   zf_CCCH_5   8 rveqCprFlQhkCq 21 
                 r+  C  FlQ+kC+
  EPX74294.1 258 RIPACYYFLQGKCN 271
                 7788*********7 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.14
   zf_CCCH_5   5 kefrveqCprFl 16 
                 ke +v qC +F 
  EPX74294.1 305 KEKHVLQCSEFA 316
                 7889*******6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (378 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1152  (0.0642534); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.56u 0.29s 00:00:00.85 Elapsed: 00:00:00.47
# Mc/sec: 2429.02
//
Query:       EPX74295.1  [L=297]
Description: anamorsin family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.1e-34  116.5   4.1    1.3e-33  115.5   4.1    1.6  1  CIAPIN1   Cytokine-induced anti-apoptosis inhibitor 1, Fe-S b
    1.3e-25   90.2   0.0    2.2e-25   89.4   0.0    1.3  1  DRE2_N    Fe-S cluster assembly protein DRE2 N-terminus


Domain annotation for each model (and alignments):
>> CIAPIN1  Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.5   4.1   1.5e-37   1.3e-33       3      98 ..     189     281 ..     187     283 .. 0.81

  Alignments for each domain:
  == domain 1  score: 115.5 bits;  conditional E-value: 1.5e-37
     CIAPIN1   3 vkpeeCekkakkrrkackdctCGlkeleeeeekkkraaadkalekkvkleeeelaevdft..vegkt..ssCgsCaLGDafrCsgCPylGlPafkpGek 97 
                  +p+eC++  +k+++ack+ctCGl+e+e++e++k++a+ ++     vk   ++ +e+dft  +++k+  ssCg+C+LGDafrCsgCPy+GlPaf+pG+ 
  EPX74295.1 189 LRPPECKPAPNKKKRACKNCTCGLREMEQKESSKASAQLET-----VK--LNDTSEIDFTekLKSKNavSSCGNCYLGDAFRCSGCPYIGLPAFNPGDP 280
                 6789**************************99665544443.....44..4566688887554444455****************************98 PP

     CIAPIN1  98 v 98 
                 +
  EPX74295.1 281 I 281
                 7 PP

>> DRE2_N  Fe-S cluster assembly protein DRE2 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.4   0.0   2.4e-29   2.2e-25       2     131 .]       4     130 ..       3     131 .. 0.88

  Alignments for each domain:
  == domain 1  score: 89.4 bits;  conditional E-value: 2.4e-29
                 EEEEEE-HHHHTSHHHHHHHHHHHHTTEEEEEEEHHHHHHT-----SSS--SEEEE---..SS-S----HHHHHHHHTT--TT--EE---H......HH CS
      DRE2_N   2 rtLLLapPsvathpekleaikklydsrsstdlqmlDRlaaglvsLpastYdlvllltdeeeeeeelliprkliqkivkaLkpgGklkgqdgkake..aq 98 
                 +tL+L++Ps+a+ +++l+++++l+d +s+++lqm+DR++++lv+Lp ++Y  v++  d+  ++ +    + ++++++++++pgG+l++++   ++  ++
  EPX74295.1   4 STLVLTSPSFASSEQELKHVLSLIDPNSERELQMIDRVQSNLVTLPVNKYISVIVALDT--ADWSSVL-TPIFPQVFACVQPGGNLRVHSSVGNNdgSF 99 
                 79***********************9*********************************..3333444.69*****************998544488** PP

                 HHHHHHHTEEEE-SSS..EEE-XXXXXXXXXXX CS
      DRE2_N  99 kleallaGlvieeeekgelvKpeqeeeeavpLk 131
                 ++ al+aG++ie  +k+ ++   +++ eavp+k
  EPX74295.1 100 EMTALMAGWMIE--SKDPWILSRPAQVEAVPIK 130
                 ***********9..7777776666667888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (297 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       899  (0.0501422); expected 358.6 (0.02)
Passed bias filter:                      469  (0.0261587); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.30s 00:00:00.79 Elapsed: 00:00:00.45
# Mc/sec: 1975.10
//
Query:       EPX74296.1  [L=142]
Description: Erg28 protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.1e-40  135.8   3.1    9.6e-40  135.4   3.1    1.2  1  Erg28            Erg28 like protein
  ------ inclusion threshold ------
       0.14   11.5   0.0        0.2   11.1   0.0    1.2  1  Phage_connector  Phage Connector (GP10)


Domain annotation for each model (and alignments):
>> Erg28  Erg28 like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.4   3.1   1.1e-43   9.6e-40       1     110 []      17     124 ..      17     124 .. 0.98

  Alignments for each domain:
  == domain 1  score: 135.4 bits;  conditional E-value: 1.1e-43
       Erg28   1 glLpkwllfvsvvslgnslqnyvtlkltrrvYsgkpkeqvtplsaRtfgtwtllsaivrlyaaynienkalyqlalltyvialvhflsEllvfktaklg 99 
                 g+L kw l+v++ +++n++q+y+t+klt+rvYs+++  +v++l++Rtfg+wt+lsa+vr y+ay+++n+ +y ++ +ty++a +hflsE+l+f++a++g
  EPX74296.1  17 GTLAKWNLLVGFAAIFNTIQSYLTPKLTQRVYSNSK--EVNGLQGRTFGLWTFLSALVRAYCAYHMSNADIYFICQCTYYLASFHFLSEWLLFRSANMG 113
                 689*******************************86..************************************************************* PP

       Erg28 100 kgllfplivat 110
                 +gll+p+iv+t
  EPX74296.1 114 AGLLSPIIVST 124
                 *********86 PP

>> Phage_connector  Phage Connector (GP10)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   2.2e-05       0.2     194     247 ..       2      55 ..       1      62 [. 0.88

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 2.2e-05
                      EEE------HHHHHHHHHHHHHHHHHHTT-------------------THHHHH CS
  Phage_connector 194 vfktdaPyvvdklnaekkavlnelltflGiknanldkkerlvvsevesndeqie 247
                      vf t a +v+d l +  +a +n l+ f  i n+        +++ v sn + ++
       EPX74296.1   2 VFSTVASFVLDNLPEGTLAKWNLLVGFAAIFNTIQSYLTPKLTQRVYSNSKEVN 55 
                      99*****************************99888887778888888877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       477  (0.0266049); expected 358.6 (0.02)
Passed bias filter:                      304  (0.0169558); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1039.77
//
Query:       EPX74297.1  [L=230]
Description: ubiquitin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   5.5e-102  333.6  13.3    1.9e-33  114.0   0.6    3.0  3  ubiquitin        Ubiquitin family
    1.4e-48  162.6  13.8    1.2e-15   57.1   0.7    3.0  3  Rad60-SLD        Ubiquitin-2 like Rad60 SUMO-like
    7.8e-18   64.7   6.1    0.00026   21.4   0.1    4.6  3  Ubiquitin_2      Ubiquitin-like domain
    1.8e-12   47.0   1.7      0.017   15.1   0.1    3.2  3  TBK1_ULD         TANK binding kinase 1 ubiquitin-like domain
    1.8e-12   47.4   2.2      0.014   15.8   0.1    3.1  3  Ubiquitin_5      Ubiquitin-like domain
    4.5e-11   42.8   1.2      0.073   13.2   0.0    3.9  3  Rad60-SLD_2      Ubiquitin-2 like Rad60 SUMO-like
    7.4e-10   39.3   0.3       0.22   12.1   0.0    3.2  3  DUF2407          DUF2407 ubiquitin-like domain
    2.4e-08   34.0   0.2       0.39   10.5   0.0    3.1  3  Sde2_N_Ubi       Silencing defective 2 N-terminal ubiquitin d
    2.4e-06   27.5  16.0         11    6.1   0.2    6.0  6  Ubiquitin_4      Ubiquitin-like domain
    8.6e-05   22.6   1.0        8.1    6.7   0.0    3.2  3  DUF3861          Domain of Unknown Function with PDB structur
    0.00015   21.5   2.1        6.9    6.6   0.0    3.3  3  ACT_5            ACT domain
    0.00028   21.2   0.0         20    5.6   0.0    3.6  3  DUF2870          Protein of unknown function (DUF2870)
    0.00063   19.2   0.1        1.1    8.5   0.0    2.3  2  Methyltrans_RNA  RNA methyltransferase
     0.0012   19.6   0.1         34    5.3   0.0    3.2  3  Big_7            Bacterial Ig domain
     0.0031   17.6   2.9         19    5.5   0.1    3.3  3  YcgR_2           Flagellar protein YcgR
      0.007   16.5   3.0        4.5    7.4   0.0    3.1  3  UDP-g_GGTase     UDP-glucose:Glycoprotein Glucosyltransferase
     0.0074   15.7   0.0         15    5.0   0.0    3.0  3  DUF969           Protein of unknown function (DUF969)
  ------ inclusion threshold ------
      0.031   14.8   0.0         95    3.7   0.0    3.1  3  DUF493           Protein of unknown function (DUF493)
      0.031   13.9   0.0         72    3.2   0.0    3.2  3  Raf1_HTH         Rubisco accumulation factor 1 helix turn hel
      0.033   14.8   0.3         96    3.7   0.0    3.3  3  ACT_4            ACT domain
       0.09   12.9   0.0         62    3.8   0.0    3.4  3  ORF11CD3         ORF11CD3 domain
       0.12   12.5   2.6         73    3.6   0.1    3.2  3  ProRS-C_2        Prolyl-tRNA synthetase, C-terminal
       0.14   12.4  18.4        4.5    7.6   1.4    3.3  3  Tash_PEST        Tash protein PEST motif
       0.27   11.1   3.4         76    3.3   0.0    4.3  3  Myosin_N         Myosin N-terminal SH3-like domain
       0.45   10.2   1.7    1.1e+02    2.5   0.0    3.2  3  DMA              DMRTA motif
       0.53    8.9  10.5        8.4    4.9   0.3    3.9  4  Plexin_cytopl    Plexin cytoplasmic RasGAP domain
       0.87    9.4   5.0         67    3.3   0.1    3.3  3  PI3K_p85B        PI3-kinase family, p85-binding domain
        2.9    7.8   4.9    1.2e+02    2.6   0.1    3.3  3  FlgD_ig          FlgD Ig-like domain


Domain annotation for each model (and alignments):
>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.0   0.6     3e-36   1.9e-33       1      72 []       3      74 ..       3      74 .. 0.99
   2 !  114.0   0.6     3e-36   1.9e-33       1      72 []      79     150 ..      79     150 .. 0.99
   3 !  114.0   0.6     3e-36   1.9e-33       1      72 []     155     226 ..     155     226 .. 0.99

  Alignments for each domain:
  == domain 1  score: 114.0 bits;  conditional E-value: 3e-36
                EEEEETTSEEEEEEEETTSBHHHHHHHHHHHHTSSGGGEEEEETTEEE-TTSBHGGHTTSTTEEEEEEESSC CS
   ubiquitin  1 itvktldgkkitleveesdtveelKekiaekegipaeqqrLiysGkvLedertleeygiqdgstlhlvlrlr 72
                i+vktl+gk+itleve+sdt++++K ki++kegip++qqrLi++Gk+Led rtl++y+iq++stlhlvlrlr
  EPX74297.1  3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74
                9********************************************************************986 PP

  == domain 2  score: 114.0 bits;  conditional E-value: 3e-36
                 EEEEETTSEEEEEEEETTSBHHHHHHHHHHHHTSSGGGEEEEETTEEE-TTSBHGGHTTSTTEEEEEEESSC CS
   ubiquitin   1 itvktldgkkitleveesdtveelKekiaekegipaeqqrLiysGkvLedertleeygiqdgstlhlvlrlr 72 
                 i+vktl+gk+itleve+sdt++++K ki++kegip++qqrLi++Gk+Led rtl++y+iq++stlhlvlrlr
  EPX74297.1  79 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150
                 9********************************************************************986 PP

  == domain 3  score: 114.0 bits;  conditional E-value: 3e-36
                 EEEEETTSEEEEEEEETTSBHHHHHHHHHHHHTSSGGGEEEEETTEEE-TTSBHGGHTTSTTEEEEEEESSC CS
   ubiquitin   1 itvktldgkkitleveesdtveelKekiaekegipaeqqrLiysGkvLedertleeygiqdgstlhlvlrlr 72 
                 i+vktl+gk+itleve+sdt++++K ki++kegip++qqrLi++Gk+Led rtl++y+iq++stlhlvlrlr
  EPX74297.1 155 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226
                 9********************************************************************986 PP

>> Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.1   0.7   1.8e-18   1.2e-15       1      72 []       1      71 [.       1      71 [. 0.98
   2 !   57.1   0.7   1.8e-18   1.2e-15       1      72 []      77     147 ..      77     147 .. 0.98
   3 !   57.1   0.7   1.8e-18   1.2e-15       1      72 []     153     223 ..     153     223 .. 0.98

  Alignments for each domain:
  == domain 1  score: 57.1 bits;  conditional E-value: 1.8e-18
                EEEEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEEETTEE--TTSBGGGSS--TTEEEEEEX CS
   Rad60-SLD  1 ikiilkgkdgkevkikVkptttvskLieayrkkkgipeeqkvrLiFDGeeLdpnstvedldiedgdtidvvi 72
                ++i++k+ +gk+++++V+++ t+ +++++ ++k+gip+ +++rLiF G++L++  t+ d+ i++++t+++v+
  EPX74297.1  1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPP-DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 71
                89************************************.******************************986 PP

  == domain 2  score: 57.1 bits;  conditional E-value: 1.8e-18
                 EEEEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEEETTEE--TTSBGGGSS--TTEEEEEEX CS
   Rad60-SLD   1 ikiilkgkdgkevkikVkptttvskLieayrkkkgipeeqkvrLiFDGeeLdpnstvedldiedgdtidvvi 72 
                 ++i++k+ +gk+++++V+++ t+ +++++ ++k+gip+ +++rLiF G++L++  t+ d+ i++++t+++v+
  EPX74297.1  77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPP-DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 147
                 89************************************.******************************986 PP

  == domain 3  score: 57.1 bits;  conditional E-value: 1.8e-18
                 EEEEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEEETTEE--TTSBGGGSS--TTEEEEEEX CS
   Rad60-SLD   1 ikiilkgkdgkevkikVkptttvskLieayrkkkgipeeqkvrLiFDGeeLdpnstvedldiedgdtidvvi 72 
                 ++i++k+ +gk+++++V+++ t+ +++++ ++k+gip+ +++rLiF G++L++  t+ d+ i++++t+++v+
  EPX74297.1 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPP-DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223
                 89************************************.******************************986 PP

>> Ubiquitin_2  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.1   4.5e-07   0.00029      17      80 ..      14      69 ..       2      70 .. 0.86
   2 !   21.4   0.1   4.1e-07   0.00026      15      80 ..      88     145 ..      77     146 .. 0.85
   3 !   21.4   0.1   4.1e-07   0.00026      15      80 ..     164     221 ..     153     222 .. 0.85

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 4.5e-07
                 EEEEETTSBHHHHHHHHHHHH---TTCEEEEEE.-SSSSEEECSSGCCSBCCCCT--TTEEEEE CS
  Ubiquitin_2 17 errfsksltieelKekLelitGtspasmrLqlyddkkdnevsklddddalLgsYgvkdgmrihV 80
                 +  +++s+ti+++K+k++   G++p+++rL +          k  +d ++L++Y+++  +++h 
   EPX74297.1 14 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFA--------GKQLEDGRTLSDYNIQKESTLHL 69
                 5667899************************99........56678999********9999995 PP

  == domain 2  score: 21.4 bits;  conditional E-value: 4.1e-07
                  EEEEEEETTSBHHHHHHHHHHHH---TTCEEEEEE.-SSSSEEECSSGCCSBCCCCT--TTEEEEE CS
  Ubiquitin_2  15 sserrfsksltieelKekLelitGtspasmrLqlyddkkdnevsklddddalLgsYgvkdgmrihV 80 
                    +  +++s+ti+++K+k++   G++p+++rL +          k  +d ++L++Y+++  +++h 
   EPX74297.1  88 TITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFA--------GKQLEDGRTLSDYNIQKESTLHL 145
                  556678899************************99........56678999********9999995 PP

  == domain 3  score: 21.4 bits;  conditional E-value: 4.1e-07
                  EEEEEEETTSBHHHHHHHHHHHH---TTCEEEEEE.-SSSSEEECSSGCCSBCCCCT--TTEEEEE CS
  Ubiquitin_2  15 sserrfsksltieelKekLelitGtspasmrLqlyddkkdnevsklddddalLgsYgvkdgmrihV 80 
                    +  +++s+ti+++K+k++   G++p+++rL +          k  +d ++L++Y+++  +++h 
   EPX74297.1 164 TITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFA--------GKQLEDGRTLSDYNIQKESTLHL 221
                  556678899************************99........56678999********9999995 PP

>> TBK1_ULD  TANK binding kinase 1 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   2.7e-05     0.018      19      53 ..      17      51 ..       5      71 .. 0.86
   2 !   15.1   0.1   2.6e-05     0.017      19      53 ..      93     127 ..      78     147 .. 0.86
   3 !   15.0   0.1   2.7e-05     0.017      19      53 ..     169     203 ..     154     221 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 2.7e-05
    TBK1_ULD 19 ihpyntvaifqeevakqTkiaaekQellfeghrll 53
                +++ +t++++  +++++  i++++Q l+f g++l 
  EPX74297.1 17 VESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLE 51
                67899***************************973 PP

  == domain 2  score: 15.1 bits;  conditional E-value: 2.6e-05
    TBK1_ULD  19 ihpyntvaifqeevakqTkiaaekQellfeghrll 53 
                 +++ +t++++  +++++  i++++Q l+f g++l 
  EPX74297.1  93 VESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLE 127
                 6789****************************973 PP

  == domain 3  score: 15.0 bits;  conditional E-value: 2.7e-05
    TBK1_ULD  19 ihpyntvaifqeevakqTkiaaekQellfeghrll 53 
                 +++ +t++++  +++++  i++++Q l+f g++l 
  EPX74297.1 169 VESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLE 203
                 6789****************************974 PP

>> Ubiquitin_5  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   2.8e-05     0.018      34      93 ..      13      73 ..       5      78 .. 0.83
   2 !   15.8   0.1   2.1e-05     0.014      32      93 ..      87     149 ..      66     154 .. 0.83
   3 !   15.3   0.1   2.9e-05     0.019      33      92 ..     164     224 ..     153     228 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 2.8e-05
  Ubiquitin_5 34 klletkLdvtgkelvskiaeefglkensiKlilngklleldktLeeQgvknnskv.mvLkl 93
                  +le++ + t +++ ski ++ g+  ++ +li  gk+le ++tL + +++++s + +vL+l
   EPX74297.1 13 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLhLVLRL 73
                 55666666678899999999****99***********************999875467765 PP

  == domain 2  score: 15.8 bits;  conditional E-value: 2.1e-05
  Ubiquitin_5  32 kkklletkLdvtgkelvskiaeefglkensiKlilngklleldktLeeQgvknnskv.mvLkl 93 
                  k  +le++ + t +++ ski ++ g+  ++ +li  gk+le ++tL + +++++s + +vL+l
   EPX74297.1  87 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLhLVLRL 149
                  4556777777788899999********9***********************999875467765 PP

  == domain 3  score: 15.3 bits;  conditional E-value: 2.9e-05
  Ubiquitin_5  33 kklletkLdvtgkelvskiaeefglkensiKlilngklleldktLeeQgvknnskv.mvLk 92 
                    +le++ + t +++ ski ++ g+  ++ +li  gk+le ++tL + +++++s + +vL+
   EPX74297.1 164 TITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLhLVLR 224
                  4566666677888999999******99***********************99987546666 PP

>> Rad60-SLD_2  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.0   0.00013     0.082      17      87 ..      14      71 ..       2      75 .. 0.69
   2 !   13.2   0.0   0.00011     0.073      12      87 ..      86     147 ..      76     151 .. 0.69
   3 !   13.1   0.0   0.00012     0.077      12      87 ..     162     223 ..     152     226 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 0.00013
                 EEEEETT-BHHHHHHHHHHHS-TT-SSS--SCCCEEEEETTEEE-TTSBCCCCS-TTTTTTTS-EEEEEEE CS
  Rad60-SLD_2 17 pvkfsdaatvaelkekviaqWPkdkeekpksvndlklilaGkiLennktlkelrlplgevkggvtvmHvvv 87
                  ++ ++++t++++k k+     +dke  p  +++ +li aGk Le+ +tl++++++        +++H+v+
   EPX74297.1 14 TLEVESSDTIDNVKSKI-----QDKEGIP--PDQQRLIFAGKQLEDGRTLSDYNIQKE------STLHLVL 71
                 55666777777777777.....4555533..34559****************965433......3566665 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 0.00011
                  S-EEEEEEEETT-BHHHHHHHHHHHS-TT-SSS--SCCCEEEEETTEEE-TTSBCCCCS-TTTTTTTS-EEEEEEE CS
  Rad60-SLD_2  12 GsDigpvkfsdaatvaelkekviaqWPkdkeekpksvndlklilaGkiLennktlkelrlplgevkggvtvmHvvv 87 
                  G+ +  ++ ++++t++++k k+     +dke  p  +++ +li aGk Le+ +tl++++++        +++H+v+
   EPX74297.1  86 GK-TITLEVESSDTIDNVKSKI-----QDKEGIP--PDQQRLIFAGKQLEDGRTLSDYNIQKE------STLHLVL 147
                  55.5556667777777777777.....4555533..34559****************965433......3566665 PP

  == domain 3  score: 13.1 bits;  conditional E-value: 0.00012
                  S-EEEEEEEETT-BHHHHHHHHHHHS-TT-SSS--SCCCEEEEETTEEE-TTSBCCCCS-TTTTTTTS-EEEEEEE CS
  Rad60-SLD_2  12 GsDigpvkfsdaatvaelkekviaqWPkdkeekpksvndlklilaGkiLennktlkelrlplgevkggvtvmHvvv 87 
                  G+ +  ++ ++++t++++k k+     +dke  p  +++ +li aGk Le+ +tl++++++        +++H+v+
   EPX74297.1 162 GK-TITLEVESSDTIDNVKSKI-----QDKEGIP--PDQQRLIFAGKQLEDGRTLSDYNIQKE------STLHLVL 223
                  55.5556667777777777777.....4555533..34559****************965433......3566665 PP

>> DUF2407  DUF2407 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   0.0   0.00034      0.22      14      64 ..      13      59 ..       7      88 .. 0.82
   2 !   11.9   0.0   0.00039      0.25      14      64 ..      89     135 ..      80     148 .. 0.81
   3 !   11.8   0.0   0.00043      0.27      14      63 ..     165     210 ..     158     222 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00034
     DUF2407 14 leLdipdpntttvagLkqliRerlpaelasrrLrLIyaGrlLedttslass 64
                ++L+++  ++ t+ ++k  i ++    +   + rLI+aG+ Led  +l++ 
  EPX74297.1 13 ITLEVE--SSDTIDNVKSKIQDKE--GIPPDQQRLIFAGKQLEDGRTLSDY 59
                566666..6789999999999987..67777789*************9874 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 0.00039
     DUF2407  14 leLdipdpntttvagLkqliRerlpaelasrrLrLIyaGrlLedttslass 64 
                 ++L+++  ++ t+ ++k  i ++    +   + rLI+aG+ Led  +l++ 
  EPX74297.1  89 ITLEVE--SSDTIDNVKSKIQDKE--GIPPDQQRLIFAGKQLEDGRTLSDY 135
                 566666..6789999999999987..67777789************99874 PP

  == domain 3  score: 11.8 bits;  conditional E-value: 0.00043
     DUF2407  14 leLdipdpntttvagLkqliRerlpaelasrrLrLIyaGrlLedttslas 63 
                 ++L+++  ++ t+ ++k  i ++    +   + rLI+aG+ Led  +l++
  EPX74297.1 165 ITLEVE--SSDTIDNVKSKIQDKE--GIPPDQQRLIFAGKQLEDGRTLSD 210
                 566666..6789999999999987..67777789************9986 PP

>> Sde2_N_Ubi  Silencing defective 2 N-terminal ubiquitin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.0   0.00061      0.39       2      88 ..       2      76 ..       1      78 [. 0.85
   2 !   10.4   0.0   0.00065      0.42       2      88 ..      78     152 ..      77     153 .. 0.84
   3 !   10.4   0.0   0.00067      0.43       2      88 ..     154     228 ..     153     229 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00061
  Sde2_N_Ubi  2 nvlvssfdgltlpstlsltlpstatvsdlvdklserlpeslkesliLttvsnkqlllssdvslssllassadsellslrllvrlrGG 88
                +++v+++ g+    t++l++ s+ t+ ++ +k++++      +   L  + + ql  ++  +ls++  ++++    +l+l++rlrGG
  EPX74297.1  2 QIFVKTLTGK----TITLEVESSDTIDNVKSKIQDKEGIPPDQ-QRLIFAGK-QL--EDGRTLSDYNIQKES----TLHLVLRLRGG 76
                8999999996....999*****************998877555.45555554.66..99999****999999....99********9 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00065
  Sde2_N_Ubi   2 nvlvssfdgltlpstlsltlpstatvsdlvdklserlpeslkesliLttvsnkqlllssdvslssllassadsellslrllvrlrGG 88 
                 +++v+++ g+    t++l++ s+ t+ ++ +k++++      +   L  + + ql  ++  +ls++  ++++    +l+l++rlrGG
  EPX74297.1  78 QIFVKTLTGK----TITLEVESSDTIDNVKSKIQDKEGIPPDQ-QRLIFAGK-QL--EDGRTLSDYNIQKES----TLHLVLRLRGG 152
                 8999999996....999*****************998877555.45555544.66..99999****999999....99********9 PP

  == domain 3  score: 10.4 bits;  conditional E-value: 0.00067
  Sde2_N_Ubi   2 nvlvssfdgltlpstlsltlpstatvsdlvdklserlpeslkesliLttvsnkqlllssdvslssllassadsellslrllvrlrGG 88 
                 +++v+++ g+    t++l++ s+ t+ ++ +k++++      +   L  + + ql  ++  +ls++  ++++    +l+l++rlrGG
  EPX74297.1 154 QIFVKTLTGK----TITLEVESSDTIDNVKSKIQDKEGIPPDQ-QRLIFAGK-QL--EDGRTLSDYNIQKES----TLHLVLRLRGG 228
                 8999999996....999*****************998877555.45555544.66..99999****999999....99********9 PP

>> Ubiquitin_4  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.2     0.017        11       1      32 [.       1      32 [.       1      36 [. 0.94
   2 ?    5.5   0.0     0.026        17      58      86 ..      43      70 ..      39      73 .. 0.83
   3 ?    6.1   0.2     0.017        11       1      32 [.      77     108 ..      77     112 .. 0.94
   4 ?    5.5   0.0     0.026        17      58      86 ..     119     146 ..     115     149 .. 0.83
   5 ?    6.1   0.2     0.017        11       1      32 [.     153     184 ..     153     188 .. 0.94
   6 ?    5.5   0.0     0.026        17      58      86 ..     195     222 ..     191     225 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.017
  Ubiquitin_4  1 lkvtvkkldgeslevvvkqnatvkdLkkaier 32
                 +++ vk l g+++ ++v+++ t+ ++k  i+ 
   EPX74297.1  1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD 32
                 7899*************************997 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.026
  Ubiquitin_4 58 LsfegekLkddkaklkeygirnkselsFv 86
                 L+f g++L+ d  +l++y i+++s+l+ v
   EPX74297.1 43 LIFAGKQLE-DGRTLSDYNIQKESTLHLV 70
                 889999986.6789***********9976 PP

  == domain 3  score: 6.1 bits;  conditional E-value: 0.017
  Ubiquitin_4   1 lkvtvkkldgeslevvvkqnatvkdLkkaier 32 
                  +++ vk l g+++ ++v+++ t+ ++k  i+ 
   EPX74297.1  77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD 108
                  7899*************************997 PP

  == domain 4  score: 5.5 bits;  conditional E-value: 0.026
  Ubiquitin_4  58 LsfegekLkddkaklkeygirnkselsFv 86 
                  L+f g++L+ d  +l++y i+++s+l+ v
   EPX74297.1 119 LIFAGKQLE-DGRTLSDYNIQKESTLHLV 146
                  889999986.6789***********9976 PP

  == domain 5  score: 6.1 bits;  conditional E-value: 0.017
  Ubiquitin_4   1 lkvtvkkldgeslevvvkqnatvkdLkkaier 32 
                  +++ vk l g+++ ++v+++ t+ ++k  i+ 
   EPX74297.1 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD 184
                  7899*************************997 PP

  == domain 6  score: 5.5 bits;  conditional E-value: 0.026
  Ubiquitin_4  58 LsfegekLkddkaklkeygirnkselsFv 86 
                  L+f g++L+ d  +l++y i+++s+l+ v
   EPX74297.1 195 LIFAGKQLE-DGRTLSDYNIQKESTLHLV 222
                  889999986.6789***********9976 PP

>> DUF3861  Domain of Unknown Function with PDB structure (DUF3861)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.0     0.014       8.9      19      60 ..       9      50 ..       5      58 .. 0.87
   2 ?    6.7   0.0     0.013       8.1      19      60 ..      85     126 ..      77     134 .. 0.87
   3 ?    6.6   0.0     0.014       8.7      19      59 ..     161     201 ..     153     205 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.014
     DUF3861 19 eekpleFeaenhdDilkiverlkkkedldadeaaalavglkL 60
                + k++++e+e++d i ++  ++++ke++ +d+++ +  g +L
  EPX74297.1  9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL 50
                5579*************************9998877766655 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.013
     DUF3861  19 eekpleFeaenhdDilkiverlkkkedldadeaaalavglkL 60 
                 + k++++e+e++d i ++  ++++ke++ +d+++ +  g +L
  EPX74297.1  85 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL 126
                 5579*************************9998877766655 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.014
     DUF3861  19 eekpleFeaenhdDilkiverlkkkedldadeaaalavglk 59 
                 + k++++e+e++d i ++  ++++ke++ +d+++ +  g +
  EPX74297.1 161 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQ 201
                 5579*************************999887766655 PP

>> ACT_5  ACT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.1     0.012       7.9      34      53 ..      11      30 ..       1      31 [. 0.83
   2 ?    6.6   0.0     0.011       6.9      33      53 ..      86     106 ..      76     107 .. 0.82
   3 ?    6.6   0.0     0.011       6.9      33      53 ..     162     182 ..     152     183 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.012
       ACT_5 34 vrieltVesersvelLsnQl 53
                 +i+l+Ves+++++++ +++
  EPX74297.1 11 KTITLEVESSDTIDNVKSKI 30
                58**************9998 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.011
       ACT_5  33 tvrieltVesersvelLsnQl 53 
                   +i+l+Ves+++++++ +++
  EPX74297.1  86 GKTITLEVESSDTIDNVKSKI 106
                 468**************9998 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.011
       ACT_5  33 tvrieltVesersvelLsnQl 53 
                   +i+l+Ves+++++++ +++
  EPX74297.1 162 GKTITLEVESSDTIDNVKSKI 182
                 468**************9998 PP

>> DUF2870  Protein of unknown function (DUF2870)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.031        20       3      25 ..      43      65 ..      41      76 .. 0.79
   2 ?    5.6   0.0     0.031        20       3      25 ..     119     141 ..     117     152 .. 0.79
   3 ?    5.6   0.0     0.033        21       3      25 ..     195     217 ..     193     227 .. 0.79

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.031
     DUF2870  3 lWwagkelqrgkklsdyvGkNek 25
                l +agk+l++g++lsdy  + e 
  EPX74297.1 43 LIFAGKQLEDGRTLSDYNIQKES 65
                889*************9766555 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.031
     DUF2870   3 lWwagkelqrgkklsdyvGkNek 25 
                 l +agk+l++g++lsdy  + e 
  EPX74297.1 119 LIFAGKQLEDGRTLSDYNIQKES 141
                 889*************9766555 PP

  == domain 3  score: 5.6 bits;  conditional E-value: 0.033
     DUF2870   3 lWwagkelqrgkklsdyvGkNek 25 
                 l +agk+l++g++lsdy  + e 
  EPX74297.1 195 LIFAGKQLEDGRTLSDYNIQKES 217
                 889*************9765555 PP

>> Methyltrans_RNA  RNA methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.0    0.0018       1.2       2      61 ..      60     118 ..      59     124 .. 0.82
   2 !    8.5   0.0    0.0018       1.1       2      61 ..     136     194 ..     135     203 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0018
                      EEEHHHHHHHHTTTT--TT-EEEEEESSSEEEEEEEEEEESS.EEEEEEEEEEE---SSSS CS
  Methyltrans_RNA   2 sltdeeahHlvkVlRlkegdeiklfdgdgkeyeaeieeiskk.kvtvkilekeeenkespe 61 
                      ++++e + Hl  VlRl+ g +i +    gk ++ e+e+ +   +v+ ki++ke +++++++
       EPX74297.1  60 NIQKESTLHL--VLRLRGGMQIFVKTLTGKTITLEVESSDTIdNVKSKIQDKEGIPPDQQR 118
                      5788999999..*************************998751557778777777776655 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0018
                      EEEHHHHHHHHTTTT--TT-EEEEEESSSEEEEEEEEEEESS.EEEEEEEEEEE---SSSS CS
  Methyltrans_RNA   2 sltdeeahHlvkVlRlkegdeiklfdgdgkeyeaeieeiskk.kvtvkilekeeenkespe 61 
                      ++++e + Hl  VlRl+ g +i +    gk ++ e+e+ +   +v+ ki++ke +++++++
       EPX74297.1 136 NIQKESTLHL--VLRLRGGMQIFVKTLTGKTITLEVESSDTIdNVKSKIQDKEGIPPDQQR 194
                      5788999999..*************************998751567778777777776655 PP

>> Big_7  Bacterial Ig domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0     0.053        34      13      42 ..       7      34 ..       6      56 .. 0.81
   2 ?    5.3   0.0     0.053        34      13      42 ..      83     110 ..      82     132 .. 0.81
   3 ?    5.3   0.0     0.053        34      13      42 ..     159     186 ..     158     208 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.053
                -EBTSEEEEEEEEE-SS-EEEEEEEETTEE CS
       Big_7 13 tvsggtvtisasAsddggvskVefyvdgtl 42
                t++g+t+t++++ sd   +++V+  +++++
  EPX74297.1  7 TLTGKTITLEVESSDT--IDNVKSKIQDKE 34
                6678899999999998..888888877766 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.053
                 -EBTSEEEEEEEEE-SS-EEEEEEEETTEE CS
       Big_7  13 tvsggtvtisasAsddggvskVefyvdgtl 42 
                 t++g+t+t++++ sd   +++V+  +++++
  EPX74297.1  83 TLTGKTITLEVESSDT--IDNVKSKIQDKE 110
                 6678899999999998..888888877766 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.053
                 -EBTSEEEEEEEEE-SS-EEEEEEEETTEE CS
       Big_7  13 tvsggtvtisasAsddggvskVefyvdgtl 42 
                 t++g+t+t++++ sd   +++V+  +++++
  EPX74297.1 159 TLTGKTITLEVESSDT--IDNVKSKIQDKE 186
                 6678899999999998..888888877766 PP

>> YcgR_2  Flagellar protein YcgR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.1      0.03        19       3      26 ..      10      33 ..       9      45 .. 0.89
   2 ?    5.5   0.1      0.03        19       3      26 ..      86     109 ..      85     121 .. 0.89
   3 ?    5.5   0.1      0.03        19       3      26 ..     162     185 ..     161     197 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.03
                TSEEEEEEEETTEEEEEEEEEEEE CS
      YcgR_2  3 Gdkveieiesgdgekryksrvvdi 26
                G+ +++e+es+d   ++ks+++d 
  EPX74297.1 10 GKTITLEVESSDTIDNVKSKIQDK 33
                899***********99******85 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.03
                 TSEEEEEEEETTEEEEEEEEEEEE CS
      YcgR_2   3 Gdkveieiesgdgekryksrvvdi 26 
                 G+ +++e+es+d   ++ks+++d 
  EPX74297.1  86 GKTITLEVESSDTIDNVKSKIQDK 109
                 899***********99******85 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.03
                 TSEEEEEEEETTEEEEEEEEEEEE CS
      YcgR_2   3 Gdkveieiesgdgekryksrvvdi 26 
                 G+ +++e+es+d   ++ks+++d 
  EPX74297.1 162 GKTITLEVESSDTIDNVKSKIQDK 185
                 899***********99******85 PP

>> UDP-g_GGTase  UDP-glucose:Glycoprotein Glucosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0       1.7   1.1e+03      81      99 ..       2      20 ..       1      28 [. 0.82
   2 !    7.4   0.0     0.007       4.5      52     100 ..      49      97 ..      48     104 .. 0.84
   3 !    7.4   0.0     0.007       4.5      52     100 ..     125     173 ..     124     180 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 1.7
                  EEEE-STT-EEE--EEEE- CS
  UDP-g_GGTase 81 evvltsfegktlyprvkrk 99
                  ++++++++gkt++++v+  
    EPX74297.1  2 QIFVKTLTGKTITLEVESS 20
                  689999******9999876 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.007
                   EE-TTHHHHHEEEEE--SS-S--TT----EEEE-STT-EEE--EEEE-T CS
  UDP-g_GGTase  52 elregrssdiyeiesvgaeglsspkdegkevvltsfegktlyprvkrkp 100
                   +l++gr+ + y+i++ ++ +l  + + g ++++++++gkt++++v+  +
    EPX74297.1  49 QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 97 
                   5889**********99999865555679***************998765 PP

  == domain 3  score: 7.4 bits;  conditional E-value: 0.007
                   EE-TTHHHHHEEEEE--SS-S--TT----EEEE-STT-EEE--EEEE-T CS
  UDP-g_GGTase  52 elregrssdiyeiesvgaeglsspkdegkevvltsfegktlyprvkrkp 100
                   +l++gr+ + y+i++ ++ +l  + + g ++++++++gkt++++v+  +
    EPX74297.1 125 QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 173
                   5889**********99999865555679***************998765 PP

>> DUF969  Protein of unknown function (DUF969)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.023        15      70     117 ..      32      79 ..      28      86 .. 0.88
   2 ?    5.0   0.0     0.023        15      70     117 ..     108     155 ..     104     162 .. 0.88
   3 ?    2.0   0.0      0.18   1.1e+02      70     113 ..     184     227 ..     180     229 .. 0.90

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.023
      DUF969  70 eraGLkeraaklikkikkatagrlllvYllirelaaalglslgGhaqf 117
                 ++ G+    ++li   k++  gr l+ Y + +e +  l l+l G  q+
  EPX74297.1  32 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 79 
                 67888889999*****************************99887774 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.023
      DUF969  70 eraGLkeraaklikkikkatagrlllvYllirelaaalglslgGhaqf 117
                 ++ G+    ++li   k++  gr l+ Y + +e +  l l+l G  q+
  EPX74297.1 108 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 155
                 67888889999*****************************99887774 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.18
      DUF969  70 eraGLkeraaklikkikkatagrlllvYllirelaaalglslgG 113
                 ++ G+    ++li   k++  gr l+ Y + +e +  l l+l G
  EPX74297.1 184 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 227
                 67888889999***************************999988 PP

>> DUF493  Protein of unknown function (DUF493)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0      0.15        95      56      79 ..      12      35 ..       7      37 .. 0.89
   2 ?    3.7   0.0      0.15        95      56      79 ..      88     111 ..      83     113 .. 0.89
   3 ?    3.7   0.0      0.15        95      56      79 ..     164     187 ..     159     189 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.15
      DUF493 56 tvtvrveseeqldalyqeLkahpr 79
                t+t++ves++ +d++ +++++ + 
  EPX74297.1 12 TITLEVESSDTIDNVKSKIQDKEG 35
                89**************99999876 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.15
      DUF493  56 tvtvrveseeqldalyqeLkahpr 79 
                 t+t++ves++ +d++ +++++ + 
  EPX74297.1  88 TITLEVESSDTIDNVKSKIQDKEG 111
                 89**************99999876 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.15
      DUF493  56 tvtvrveseeqldalyqeLkahpr 79 
                 t+t++ves++ +d++ +++++ + 
  EPX74297.1 164 TITLEVESSDTIDNVKSKIQDKEG 187
                 89**************99999876 PP

>> Raf1_HTH  Rubisco accumulation factor 1 helix turn helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0      0.11        72      34      55 ..      28      49 ..      26      52 .. 0.88
   2 ?    3.2   0.0      0.11        72      34      55 ..     104     125 ..     102     128 .. 0.88
   3 ?    3.2   0.0      0.11        72      34      55 ..     180     201 ..     178     204 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.11
    Raf1_HTH 34 qeIfEaTGiepvqQnqliVaaq 55
                ++I ++ Gi p qQ ++  + q
  EPX74297.1 28 SKIQDKEGIPPDQQRLIFAGKQ 49
                6899***********9998877 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.11
    Raf1_HTH  34 qeIfEaTGiepvqQnqliVaaq 55 
                 ++I ++ Gi p qQ ++  + q
  EPX74297.1 104 SKIQDKEGIPPDQQRLIFAGKQ 125
                 6899***********9998877 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.11
    Raf1_HTH  34 qeIfEaTGiepvqQnqliVaaq 55 
                 ++I ++ Gi p qQ ++  + q
  EPX74297.1 180 SKIQDKEGIPPDQQRLIFAGKQ 201
                 6899***********9998877 PP

>> ACT_4  ACT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0      0.16     1e+02      51      75 ..      12      36 ..       6      37 .. 0.86
   2 ?    3.7   0.0      0.15        96      51      75 ..      88     112 ..      81     113 .. 0.86
   3 ?    3.7   0.0      0.15        96      51      75 ..     164     188 ..     157     189 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.16
       ACT_4 51 kitveVkdvehLsrviakLraipgV 75
                +it+eV++++ +++v  k++  +g+
  EPX74297.1 12 TITLEVESSDTIDNVKSKIQDKEGI 36
                69****************9976665 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.15
       ACT_4  51 kitveVkdvehLsrviakLraipgV 75 
                 +it+eV++++ +++v  k++  +g+
  EPX74297.1  88 TITLEVESSDTIDNVKSKIQDKEGI 112
                 69****************9976665 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.15
       ACT_4  51 kitveVkdvehLsrviakLraipgV 75 
                 +it+eV++++ +++v  k++  +g+
  EPX74297.1 164 TITLEVESSDTIDNVKSKIQDKEGI 188
                 69****************9976665 PP

>> ORF11CD3  ORF11CD3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.097        62      24      50 ..      53      79 ..      52      81 .. 0.93
   2 ?    3.8   0.0     0.097        62      24      50 ..     129     155 ..     128     157 .. 0.93
   3 ?    0.2   0.0       1.3   8.2e+02      24      37 ..     205     218 ..     204     226 .. 0.76

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.097
    ORF11CD3 24 GrgLsewKqkKpqltqkveeLeeklQl 50
                Gr+Ls++ ++K   +  v +L+  +Q+
  EPX74297.1 53 GRTLSDYNIQKESTLHLVLRLRGGMQI 79
                9************99999999999997 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.097
    ORF11CD3  24 GrgLsewKqkKpqltqkveeLeeklQl 50 
                 Gr+Ls++ ++K   +  v +L+  +Q+
  EPX74297.1 129 GRTLSDYNIQKESTLHLVLRLRGGMQI 155
                 9************99999999999997 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 1.3
    ORF11CD3  24 GrgLsewKqkKpql 37 
                 Gr+Ls++ ++K   
  EPX74297.1 205 GRTLSDYNIQKEST 218
                 9******9998655 PP

>> ProRS-C_2  Prolyl-tRNA synthetase, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.1      0.11        73       7      26 ..      17      36 ..      12      37 .. 0.80
   2 ?    3.6   0.1      0.11        73       7      26 ..      93     112 ..      88     113 .. 0.80
   3 ?    3.6   0.1      0.11        73       7      26 ..     169     188 ..     164     189 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.11
                --....HHHHHHHCTTT-SE CS
   ProRS-C_2  7 envnlllenikeklsekkGv 26
                +++    +n+k k+++k G+
  EPX74297.1 17 VESSDTIDNVKSKIQDKEGI 36
                5567789**********997 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.11
                 --....HHHHHHHCTTT-SE CS
   ProRS-C_2   7 envnlllenikeklsekkGv 26 
                 +++    +n+k k+++k G+
  EPX74297.1  93 VESSDTIDNVKSKIQDKEGI 112
                 5567789**********997 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.11
                 --....HHHHHHHCTTT-SE CS
   ProRS-C_2   7 envnlllenikeklsekkGv 26 
                 +++    +n+k k+++k G+
  EPX74297.1 169 VESSDTIDNVKSKIQDKEGI 188
                 5567789**********997 PP

>> Tash_PEST  Tash protein PEST motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   1.4     0.007       4.5       7      16 ..      12      21 ..      12      21 .. 0.96
   2 ?    7.6   1.4     0.007       4.5       7      16 ..      88      97 ..      88      97 .. 0.96
   3 ?    7.6   1.4     0.007       4.5       7      16 ..     164     173 ..     164     173 .. 0.96

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.007
   Tash_PEST  7 TIpVEigSDe 16
                TI++E++S++
  EPX74297.1 12 TITLEVESSD 21
                9*******98 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.007
   Tash_PEST  7 TIpVEigSDe 16
                TI++E++S++
  EPX74297.1 88 TITLEVESSD 97
                9*******98 PP

  == domain 3  score: 7.6 bits;  conditional E-value: 0.007
   Tash_PEST   7 TIpVEigSDe 16 
                 TI++E++S++
  EPX74297.1 164 TITLEVESSD 173
                 9*******98 PP

>> Myosin_N  Myosin N-terminal SH3-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.2      0.35   2.2e+02      28      38 ..       5      15 ..       2      17 .. 0.86
   2 ?    3.3   0.0      0.12        76      25      38 ..      77      91 ..      70      92 .. 0.79
   3 ?    3.3   0.0      0.12        76      25      38 ..     153     167 ..     146     168 .. 0.79

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.35
                EEETTSEEEEE CS
    Myosin_N 28 VetedGktvtV 38
                V+t +Gkt t+
  EPX74297.1  5 VKTLTGKTITL 15
                9*******995 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.12
                E.EEEEETTSEEEEE CS
    Myosin_N 25 k.vtVetedGktvtV 38
                + + V+t +Gkt t+
  EPX74297.1 77 MqIFVKTLTGKTITL 91
                4488********995 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.12
                 E.EEEEETTSEEEEE CS
    Myosin_N  25 k.vtVetedGktvtV 38 
                 + + V+t +Gkt t+
  EPX74297.1 153 MqIFVKTLTGKTITL 167
                 4488********995 PP

>> DMA  DMRTA motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0      0.17   1.1e+02      14      24 ..      62      72 ..      60      76 .. 0.87
   2 ?    2.5   0.0      0.17   1.1e+02      14      24 ..     138     148 ..     136     152 .. 0.87
   3 ?    2.5   0.0      0.17   1.1e+02      14      24 ..     214     224 ..     212     228 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.17
         DMA 14 hkrsvLelvLq 24
                +k s+L+lvL+
  EPX74297.1 62 QKESTLHLVLR 72
                89********8 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.17
         DMA  14 hkrsvLelvLq 24 
                 +k s+L+lvL+
  EPX74297.1 138 QKESTLHLVLR 148
                 89********8 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.17
         DMA  14 hkrsvLelvLq 24 
                 +k s+L+lvL+
  EPX74297.1 214 QKESTLHLVLR 224
                 89********8 PP

>> Plexin_cytopl  Plexin cytoplasmic RasGAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.2     0.034        21     200     223 ..       9      32 ..       1      35 [. 0.83
   2 ?    4.6   0.4     0.016        10     200     223 ..      85     108 ..      51     110 .. 0.70
   3 ?    4.9   0.3     0.013       8.4     199     223 ..     157     184 ..     122     189 .. 0.70
   4 ?   -2.4   0.0       2.2   1.4e+03     271     289 ..     206     224 ..     198     226 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.034
                    ---EEEEEEETT-BHHHHHHHHHH CS
  Plexin_cytopl 200 esekvevkvldcDtitQvkeKild 223
                      ++++++v + Dti+ vk+Ki d
     EPX74297.1   9 TGKTITLEVESSDTIDNVKSKIQD 32 
                    5678999**************976 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.016
                    ---EEEEEEETT-BHHHHHHHHHH CS
  Plexin_cytopl 200 esekvevkvldcDtitQvkeKild 223
                      ++++++v + Dti+ vk+Ki d
     EPX74297.1  85 TGKTITLEVESSDTIDNVKSKIQD 108
                    778899999************976 PP

  == domain 3  score: 4.9 bits;  conditional E-value: 0.013
                    -...---EEEEEEETT-BHHHHHHHHHH CS
  Plexin_cytopl 199 e...esekvevkvldcDtitQvkeKild 223
                          ++++++v + Dti+ vk+Ki d
     EPX74297.1 157 VktlTGKTITLEVESSDTIDNVKSKIQD 184
                    1333778899999999999999999976 PP

  == domain 4  score: -2.4 bits;  conditional E-value: 2.2
                    -BTTTTT--TTEEEEEE-T CS
  Plexin_cytopl 271 nTlahYkvsdgavlalvkk 289
                     Tl++Y+++ +++l+lv +
     EPX74297.1 206 RTLSDYNIQKESTLHLVLR 224
                    6999******999999865 PP

>> PI3K_p85B  PI3-kinase family, p85-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.1       0.1        67       1      18 [.      13      30 ..      13      33 .. 0.92
   2 ?    3.3   0.1       0.1        67       1      18 [.      89     106 ..      89     109 .. 0.92
   3 ?    3.3   0.1       0.1        67       1      18 [.     165     182 ..     165     185 .. 0.92

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.1
   PI3K_p85B  1 itlrvsreatLseiKeeL 18
                itl+v+++ t++++K+++
  EPX74297.1 13 ITLEVESSDTIDNVKSKI 30
                89*************986 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.1
   PI3K_p85B   1 itlrvsreatLseiKeeL 18 
                 itl+v+++ t++++K+++
  EPX74297.1  89 ITLEVESSDTIDNVKSKI 106
                 89*************986 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.1
   PI3K_p85B   1 itlrvsreatLseiKeeL 18 
                 itl+v+++ t++++K+++
  EPX74297.1 165 ITLEVESSDTIDNVKSKI 182
                 89*************986 PP

>> FlgD_ig  FlgD Ig-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.1      0.19   1.2e+02       6      34 ..       7      35 ..       4      36 .. 0.84
   2 ?    2.6   0.1      0.19   1.2e+02       6      34 ..      83     111 ..      80     112 .. 0.84
   3 ?    2.6   0.1      0.19   1.2e+02       6      34 ..     159     187 ..     156     188 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.19
                E-SS--EEEEEE.ESSSEEEEEEEE-SS- CS
     FlgD_ig  6 llgdgeaplgvelpeaadevtvtikDasG 34
                +l++++  l+ve ++ +d+v+ +i+D++G
  EPX74297.1  7 TLTGKTITLEVESSDTIDNVKSKIQDKEG 35
                456777788899**************998 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.19
                 E-SS--EEEEEE.ESSSEEEEEEEE-SS- CS
     FlgD_ig   6 llgdgeaplgvelpeaadevtvtikDasG 34 
                 +l++++  l+ve ++ +d+v+ +i+D++G
  EPX74297.1  83 TLTGKTITLEVESSDTIDNVKSKIQDKEG 111
                 456777788899**************998 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.19
                 E-SS--EEEEEE.ESSSEEEEEEEE-SS- CS
     FlgD_ig   6 llgdgeaplgvelpeaadevtvtikDasG 34 
                 +l++++  l+ve ++ +d+v+ +i+D++G
  EPX74297.1 159 TLTGKTITLEVESSDTIDNVKSKIQDKEG 187
                 456777788899**************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       219  (0.0122148); expected 358.6 (0.02)
Passed bias filter:                      156  (0.00870099); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                        28  (0.00156172); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              28  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 1695.39
//
Query:       EPX74298.1  [L=486]
Description: carboxypeptidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-71  241.8   0.0    1.7e-71  241.4   0.0    1.2  1  Peptidase_M14  Zinc carboxypeptidase


Domain annotation for each model (and alignments):
>> Peptidase_M14  Zinc carboxypeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  241.4   0.0   9.5e-76   1.7e-71       1     285 [.     182     469 ..     182     473 .. 0.95

  Alignments for each domain:
  == domain 1  score: 241.4 bits;  conditional E-value: 9.5e-76
                    HHHHHHHHHHHSTTTEEEEEEEE-TTS-EEEEEEE-SSTTSTTST-CEEEEEE-SSTT-HHHHHHHHHHHHHHHHHTTTSHHHHHHHHHEEEEEES CS
  Peptidase_M14   1 ieayldalaarypdlvrlvsiGkSvegRplkvlkisssateaeegkpvvlidggiHarEwigsalllylleqLlsaYgedeeikellddtdiyilp 96 
                    i++yl+ la++y+dl++l s+G+++egR++ +l+i    + + e+k v++++g+ HarEwi+  +l+y +++L+ +Y++d+++++lld+++++i+p
     EPX74298.1 182 INSYLRLLASMYSDLCELTSLGTTAEGRSILALRIHGRIPNKDEKKEVIILQGTAHAREWISIPTLCYSAWKLVAQYDSDNRVRKLLDKFEWIIVP 277
                    689********************************************************************************************* PP

                    -STHHHHHHHHHT-TTTTST-SBCTTSSSBS--GGGSSSSSTTSSSSBSSTTSTTBHHSSTT.SHHHHHHHHHHHH......TTEEEEEEEEESSS CS
  Peptidase_M14  97 vlNPDGyeysstedrlwrknrsnakessceGvDlnRnFpdlwnsegastspcsetyrgpapfsepetravlefiqk......knivlfidlhsysq 186
                    vlN+DGy+y+++edr w knr++ k+s c+G++++ n+ + +n +    +pc+e + g +pf++ et a+ ++i++      k+ v+f+d+hsysq
     EPX74298.1 278 VLNVDGYAYTWSEDRFWTKNRQSLKNSNCKGINIDNNWGFGFNGQ---GNPCDELFGGLEPFEANETFAMFNLISNtlpkekKSTVGFLDIHSYSQ 370
                    *****************************************9866...69***********************988899999************** PP

                    EEEESHSSSS---SS-TTHHHHHHHHHHHHHHHCHTTTTEEE.-EEEEEHHHH.T---S.S-HHHHHHHHTT-SEEEEEEESSSSSSTTS--GGGH CS
  Peptidase_M14 187 vilypygstrdeispppddeelkslarkyaealqkmvrgtey.lsegitngal.iyeas.ggmddwayertgvkfeytlelrdegkqgflppasqi 279
                     +l+py++++d    p dde++++la    + l++ v+g+ y  +++ + ++   +++  g++ d+ay +++v++ +t++lrd g++g+l+pa++i
     EPX74298.1 371 SVLWPYAYSCD--LLPADDENFQELAMGLTKVLHQ-VHGRLYsHQQACIPFDGiHKHYHpGAAIDFAYFNAEVRWPFTIRLRDVGDYGYLLPAREI 463
                    **********9..*********************9.787778667777777765677778************************************ PP

                    HHHHHH CS
  Peptidase_M14 280 epeaee 285
                     p+ +e
     EPX74298.1 464 VPTSRE 469
                    **9887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (486 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       530  (0.029561); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 3462.63
//
Query:       EPX74299.1  [L=264]
Description: complexed with Cdc5 protein Cwf15 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.4e-76  255.9  31.0    5.2e-76  255.6  31.0    1.1  1  Cwf_Cwc_15   Cwf15/Cwc15 cell cycle control protein
     0.0028   16.5  31.5     0.0036   16.1  31.5    1.1  1  Caldesmon    Caldesmon
  ------ inclusion threshold ------
        1.4    7.6  16.8        1.8    7.3  16.8    1.0  1  DUF4551      Protein of unknown function (DUF4551)
        1.5    7.0  26.1        1.9    6.7  26.1    1.2  1  CDC45        CDC45-like protein


Domain annotation for each model (and alignments):
>> Cwf_Cwc_15  Cwf15/Cwc15 cell cycle control protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  255.6  31.0   1.2e-79   5.2e-76       1     247 []       1     264 []       1     264 [] 0.89

  Alignments for each domain:
  == domain 1  score: 255.6 bits;  conditional E-value: 1.2e-79
                 XXXXXXXXXXXXXXX.XXXXXXXX--STTS----------TTT--HHHHHHS-HHHHHHHHHHHHHHHHH-----------.----------------- CS
  Cwf_Cwc_15   1 MttAhRPtfdpakGkealrgpskqyssrdlpahtkLKfRqegqgteeelekrdlraeLeeaeaeakakkrkkaeleaeeee.ekekkeeeeeeeeeeak 98 
                 MttAhRP+fdpa+G+ ++++p++ + sr lpah kLK+R++ qgt+eel+krd+r++L++aea+++a+++++a++++  e+ ++ +++ e +++e+e+k
  EPX74299.1   1 MTTAHRPQFDPARGT-SEMAPTRITASRALPAHLKLKYRKAKQGTQEELSKRDFRDQLLRAEASHFANREHGASSDKRPEApAAIEANPEAKSNESEDK 98 
                 ***************.999**************************************************998888887776445555556666667777 PP

                 ---------..-----------------..................-----.....------------------------------------------- CS
  Cwf_Cwc_15  99 rrkeelleeareidaddedseeeeeeee..................eesdd.....dsdsdsdddddedetaeLlrELekikreraeekerkerekaee 174
                    e+ll+++ e dad ++se+++e e+                  e   +     +++s++ddd++edeta+LlrELe+ik+er++eker+e e+++e
  EPX74299.1  99 VDYEALLRKTLEEDADTSESESDSEVEDkdgegsnspeekrlkttnE---EmresmSESSSDDDDEEEDETAQLLRELENIKQERQKEKERQEMEEKKE 194
                 77777898888999999999888777767888888888877775541...14555577788888889******************************** PP

                 -----------------...------------TTTS-SS-S-SSS----STTS--S-TTSSSHHHHHHHHSB. CS
  Cwf_Cwc_15 175 eekereeeiatgNpLlnlkskeesedfkvkrrWdddvvFknqargeeekkkkeFvnDllRsdFHkkFlkkyik 247
                 e+++re+eia gN Lln   ++++++f+vkrrWd+dvvFkn+++g+++++++ FvnD+lRsdFH+kFl+++++
  EPX74299.1 195 EQEKREREIAYGNVLLN---NSSTGSFQVKRRWDEDVVFKNTHKGVDDQPRQGFVNDMLRSDFHRKFLSRFVR 264
                 *****************...57889**********************************************97 PP

>> Caldesmon  Caldesmon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1  31.5   8.1e-07    0.0036     103     279 ..      32     203 ..       6     209 .. 0.70

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 8.1e-07
   Caldesmon 103 slaeekeeaeeeekssrrkeryrdeeeeeeeteekekereekkqaeskeeeeeekaeaeeeaeeeeeekkvdesedkevseelkdeeskqvleekkaie 201
                 +l+++ ++a++ ++++  k   rd+    e    +    +e+  + +k+ e  +  ea+ ea+ +e e+kvd++  +  +++l+++   + +e + ++e
  EPX74299.1  32 HLKLKYRKAKQGTQEELSKRDFRDQLLRAEAS--HFA-NREHGASSDKRPEAPAAIEANPEAKSNESEDKVDYE--ALLRKTLEEDADTSESESDSEVE 125
                 44455555555555555555554443333333..333.333344566777777888899999***********7..77788888887899999999999 PP

   Caldesmon 202 eskkqngaeeeveaalkktkktertlseasanaedeedeeakleaekkleelkr.rrdekeseefeklrqkqqeaevel 279
                 ++  + + ++ +e+ lk+t+   r  +++s +++d+e+e ++++  + le++k+ r++eke++e+e+ ++ q++ e e+
  EPX74299.1 126 DKDGEGS-NSPEEKRLKTTNEEMRESMSESSSDDDDEEEDETAQLLRELENIKQeRQKEKERQEMEEKKEEQEKREREI 203
                 8888844.444477777777777766666666777777777788899******8356699************9999885 PP

>> DUF4551  Protein of unknown function (DUF4551)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3  16.8   0.00039       1.8      86     266 ..      26     203 ..      24     243 .. 0.55

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.00039
     DUF4551  86 drercqHirityvtestalkselllskdkkselfkvspskasekksrressgaakkssslnessl.dakekeektvskksqlslslselrklseeekee 183
                 +r+   H +++y + ++ +++e l+++d + +l +++ s+  ++++  +s+  + + +   e++  ++++++e  v  ++ l+ +       + +   e
  EPX74299.1  26 SRALPAHLKLKYRKAKQGTQEE-LSKRDFRDQLLRAEASHFANREHGASSDKRP-EAPAAIEANPeAKSNESEDKVDYEALLRKT-----LEEDADTSE 117
                 577788999***9777776666.6667899999999988766666666555444.334444444422233333333333333322.....222223334 PP

     DUF4551 184 lesekalkslrsasrplPesllsrapkppsspkeppssslskderdskseessqvelrlgsvlsrlllrsla......tssaeekeael 266
                 +es+++++ +  ++   Pe+ + ++++  ++ +e+ s+s s d+ d++++e+ q+ ++l+++ ++ ++ + +      ++++e++e e+
  EPX74299.1 118 SESDSEVEDKDGEGSNSPEEKRLKTTN--EEMRESMSES-SSDDDDEEEDETAQLLRELENIKQERQKEKERqemeekKEEQEKREREI 203
                 555667889999999***998555444..3333333333.3444555555666666666666555444333312224344445555554 PP

>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7  26.1   0.00043       1.9     117     218 ..      95     211 ..      65     222 .. 0.46

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.00043
       CDC45 117 eeereayealeeeeesdeedeeeeeeddddeeeeeeeeedeedee.edeeeskkkrksksdeeee.sdddd.............ersrkrrrsepsakk 200
                 +e++ +yeal ++  +++ d++e+e+d++ e+++ e +++ e++  ++++e+ ++++s+s+++++ +++d+             er+++++r+e ++kk
  EPX74299.1  95 SEDKVDYEALLRKTLEEDADTSESESDSEVEDKDGEGSNSPEEKRlKTTNEEMRESMSESSSDDDdEEEDEtaqllrelenikqERQKEKERQEMEEKK 193
                 344558888888877754443333333333333333322222222022222223333333333332222222334443333322444444444433333 PP

       CDC45 201 lrrqlkkerrkyeavlek 218
                  ++++++++  y +vl +
  EPX74299.1 194 EEQEKREREIAYGNVLLN 211
                 333333333344444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3396  (0.189414); expected 358.6 (0.02)
Passed bias filter:                      976  (0.0544369); expected 358.6 (0.02)
Passed Vit filter:                       229  (0.0127726); expected 17.9 (0.001)
Passed Fwd filter:                        54  (0.00301188); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.05u 0.39s 00:00:01.44 Elapsed: 00:00:00.54
# Mc/sec: 1461.42
//
Query:       EPX74300.1  [L=546]
Description: chaperonin-containing T-complex theta subunit Cct8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.6e-149  498.7   6.6   1.8e-149  498.6   6.6    1.0  1  Cpn60_TCP1  TCP-1/cpn60 chaperonin family
  ------ inclusion threshold ------
      0.086   13.1   0.0       0.19   12.0   0.0    1.6  1  PucR        Purine catabolism regulatory protein-like family
       0.11   12.8   0.0        2.2    8.7   0.0    2.5  2  HTH_31      Helix-turn-helix domain


Domain annotation for each model (and alignments):
>> Cpn60_TCP1  TCP-1/cpn60 chaperonin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  498.6   6.6    3e-153  1.8e-149       1     491 []      38     530 ..      38     530 .. 0.97

  Alignments for each domain:
  == domain 1  score: 498.6 bits;  conditional E-value: 3e-153
                 HHHHHHCCSSTTXXEEEEEETTSEEEEEXSHHHHHHCSXXXSHHHHHHHHHHHHCCCCCTTCHHHHHHHHHHHHHHHHHHHHCTXXHHHHHHHHHHHHH CS
  Cpn60_TCP1   1 ladivkttlGPkGmdKmlvnkggkvvvTnDGatilkeleiehPaakllveaaesqdeevGDGTttvviLageLleeaekliaagvhpttiiegyekale 99 
                 l++i++t+lGP+G +K++vn+ +++++TnD+ati+kele+ hPaakl+v+a ++q++e GD  ++v++++geLl ++e++i++g++p++i +g+++a +
  EPX74300.1  38 LSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIKELEVIHPAAKLVVDATKQQENELGDAANFVIVFCGELLAKTENMIRMGLTPSEIAKGFDMAYS 136
                 799************************************************************************************************ PP

                 HHHHHHHHHXEEBXSCSTT.HHHHHHHHHHCTTSSXXSTHHHHHHHHHHHH.HCHCCCSEECSCCCEECCCCEECECTTSEEESEEEESS--SSTTSSC CS
  Cpn60_TCP1 100 kaleaLkeiaveisseekdreeLlkvartslsskltskeaeelsklvvdAv.klieenekeldlgrikvvkieggsledselveGlvldkgvlspdmpk 197
                 ++ +aL+ei  +     +++ +L+k++rt++ssk++ +e ++ls+lv++A+ ++++++ +++++++i+vvki ggsl +s++v+G+vl +++ ++   +
  EPX74300.1 137 HVTKALDEIVADKIEAVENEGDLIKAIRTCISSKQYGNE-DFLSDLVAKAIlTVLPKDPSKFNVDNIRVVKIMGGSLYNSQVVKGMVLPREPEGS--VQ 232
                 ******9996665556899***************99999.***********99999999***********************************9..99 PP

                 EEECEEEEEESS-BS--HHCCHHHCCCCSCCHHHHHHHHHHHHHHHHHHHHHHTTECEEEESS-B-HHHHHHHHHCT-EEE-S--HHHHHHHHHHHT-- CS
  Cpn60_TCP1 198 klenakvllldvsLeiektetkttvvlsdaeeleklekaeekqleellekiiksgvnvvvcqkgiddlalhflakngilalrrvkkkdlerlakatGat 296
                 + ++akv++++++L+i +tetk+tv l++a+e+ +++k ee+q+e  +++i+++gv+vvv+ + ++dl+lh+l++ +i ++r  +k+dl+rl++++Gat
  EPX74300.1 233 RAKKAKVAVFSCPLDISQTETKGTVLLHNAQEMLDFSKGEEEQIESHIKEIHDAGVRVVVTGGNVNDLVLHYLNRFEIAVVRVPSKFDLRRLCRVVGAT 331
                 *************************************************************************************************** PP

                 EBSCGGGGGCGC-EEEEEEEECCETTCCEEEEECE.SSSSXEEEEEEESTCCCHHHHHHHHHHHHHHHHHHHHHHEEEETTTCHHHHHHHHHHCCCCTS CS
  Cpn60_TCP1 297 avssledltpeelGtakkveeekigsekttiieev.ksgkiatillrgatdtvldeieraiedAlnvvknaiedekvvpGGGatelelakklkeyaksv 394
                 ++s+++ + pee+G+++ ve+ +ig +++t++++v +  ++ati+lrgat+t ld+ierai+d++n+vk++++d+++++G+Ga+ ++l ++l ++ +++
  EPX74300.1 332 PLSRVGVPMPEEMGSVDVVETIEIGGDRVTVFRQVeDITRTATIVLRGATKTYLDDIERAIDDGVNIVKALVKDNRLLYGAGASDMQLCTRLISIGEKT 430
                 *********************************9845689*********************************************************** PP

                 XCCHHHHHHHHHHHHTHHHHHHHHHCTSXHHHHHHHHHHHH..HTTXTTEEEETTTTC..EEECCCCTXEEEHHHHHHHHHHHHHHHHHHHCEEEEEXX CS
  Cpn60_TCP1 395 sgeeqlaieafakALevipktLaeNaGldpievlaklraah..nkgekelgidvesge..iidlveagvvDplkvkrqalksAteaastiLrideiika 489
                 +g  q ai+++++A+ev+p+t+ eNaGldp+++l+kl+aah  + ge + g+dve++e    d++e + +D l++k++a+ +Atea+ t+L +d++++ 
  EPX74300.1 431 PGIYQHAIKQYGEAFEVVPRTISENAGLDPTDILSKLYAAHqkEGGE-SIGVDVECEEegLLDAKEGQLFDVLAAKHSAIRLATEAVLTVLNVDQVVMS 528
                 ***************************************99533345.99999999998899***********************************99 PP

                 XX CS
  Cpn60_TCP1 490 kk 491
                 k+
  EPX74300.1 529 KP 530
                 85 PP

>> PucR  Purine catabolism regulatory protein-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   3.2e-05      0.19      26     113 ..     238     328 ..     231     331 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 3.2e-05
        PucR  26 wvhvlevp.diaellrggeLllttglalkd....dpealaelvrelaeagvaaLviklgreipeelieaadelglPlielpeevpfveiieev 113
                 +v v+ +p di++  ++g +ll  +  + d    ++e++++ ++e+++agv  +v +   ++ + ++++ +++++ ++ +p++ ++  +++ v
  EPX74300.1 238 KVAVFSCPlDISQTETKGTVLLHNAQEMLDfskgEEEQIESHIKEIHDAGVRVVVTGG--NVNDLVLHYLNRFEIAVVRVPSKFDLRRLCRVV 328
                 5788888889999999999999988777444555999***************999998..8*********************99998887765 PP

>> HTH_31  Helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.0   0.00037       2.2      30      58 ..     304     332 ..     291     337 .. 0.88
   2 ?    0.9   0.0       0.1   6.1e+02       3      39 ..     357     393 ..     357     402 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00037
      HTH_31  30 tlsrlEqGrrgrpspavlealaralgldp 58 
                 +l+r E +   +ps  +l++l+r++g++p
  EPX74300.1 304 YLNRFEIAVVRVPSKFDLRRLCRVVGATP 332
                 788888888889***************97 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.1
      HTH_31   3 GalLralReraGLsqeevAerlgvsestlsrlEqGrr 39 
                 G+++  +R+ + +++++   + g ++++l ++E++  
  EPX74300.1 357 GDRVTVFRQVEDITRTATIVLRGATKTYLDDIERAID 393
                 67777888889999999999999**********9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (546 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       498  (0.0277762); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.29s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 3768.18
//
Query:       EPX74301.1  [L=407]
Description: CAMK protein kinase Ppk27 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      1e-38  133.2   0.0    1.4e-38  132.8   0.0    1.2  1  Pkinase         Protein kinase domain
      1e-24   87.2   0.0      2e-24   86.3   0.0    1.4  2  Pkinase_Tyr     Protein tyrosine kinase
     0.0074   15.6   0.9       0.24   10.7   0.3    2.9  2  Kinase-like     Kinase-like
  ------ inclusion threshold ------
      0.032   13.0   0.0      0.055   12.2   0.0    1.3  1  Pkinase_fungal  Fungal protein kinase
      0.045   13.1   0.0       0.09   12.1   0.0    1.5  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
      0.051   13.5   0.2        1.2    9.0   0.0    2.5  3  APH             Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.8   0.0   4.6e-42   1.4e-38      16     263 ..     119     401 ..     101     402 .. 0.75

  Alignments for each domain:
  == domain 1  score: 132.8 bits;  conditional E-value: 4.6e-42
                 EEEEETTTTEEEEEEEEECHCHCHHHH...HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHH.HHSS--HHHHHHHHHHHHHH CS
     Pkinase  16 ykaveketgkivAvKkikkekakkkke...kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladlle.rkgslseeeakkiakqileg 110
                  + +++++++   vKk+  +++ k      k +l+Eik+l +l+h+ iv+l++++ ++++++l   + egg+l +  + + +s+s++ + +i+ +i+++
  EPX74301.1 119 TSSKDSSERQPLIVKKLLCNSKPKILStsfKGFLQEIKVLSSLRHRGIVNLINYYLSPSDILLAESFYEGGDLYECTRfNYSSFSPNFVARIFGEIVQA 217
                 3344555667788888765555554444669***********************************************66667**************** PP

                 HHHHHHTTEE-SS-SGGGEEEETTTE...............EEE-SGTTSEESSSSCS.BCTTTSCGGGS-HHHHTTSCB.SHHHHHHHHHHHHHHHHH CS
     Pkinase 111 leylHskgiiHrDlKpeNiLidekge...............lKitDFGlakelesssk.ltsfvgtseYlAPEvlkeney.skkvDvWslGvilyellt 192
                 +++lH++ ++HrDlK eNiL+ +k +               +K++DF ++k ++++++ ++s+ g++eY APEv  +  + + k+D WslG++l+ ++ 
  EPX74301.1 218 VAFLHDQLLVHRDLKLENILLTKKYKelkgaedlksfrfplIKVSDFEFSKFVDKENHiVQSEYGSPEYAAPEVYLGIAHdGYKADCWSLGILLFAMME 316
                 **********************744456677778889999***************9999***************9555555****************** PP

                 SS-STTTSSHHHHHHHHHHT..HHHHHHHCT...SHH...HHHTTS.................-HHHHHHHHHHT-SSGCCSTTHHHHHTSGG CS
     Pkinase 193 gkppfsgekgkekvekeldq..lekilkilg...etkeklpeasei.................seeakdllkkllkkdpkkRltaeellqhpy 263
                 g+ pf +    e+  +   +  +++++++              + +                   ea+ l+++ll   + +R+  eell++++
  EPX74301.1 317 GRLPFDAVPPFEDEPQVRIKryVQRLVRLSYswiR-------CKPLeeqehevagcsitrldtWIEARALVQSLLIH-RDSRPYSEELLRNSW 401
                 *****976554433332222113333333223321.......22222223445666777776666777777777754.456777777777777 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.4   4.2e+03      33      54 ..      28      49 ..      19      52 .. 0.86
   2 !   86.3   0.0   6.8e-28     2e-24       3     212 ..     103     327 ..     101     347 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.4
                 EEEESTTSSHHHHHHHHHHHHH CS
  Pkinase_Tyr 33 vKtlkeeateeekeelleeaki 54
                 vK  ++++++++k++l+ee++i
   EPX74301.1 28 VKYSNANTSNSSKRALIEETNI 49
                 8999999999999999999887 PP

  == domain 2  score: 86.3 bits;  conditional E-value: 6.8e-28
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEE....STTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTC CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtl....keeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkke 96 
                  ++k+l +G+  +V+  t + +++++++  +vK+l    k +  +++ + +l+e+k++++l+h+ iv+l+  +++ + +l+   + +gGdL +  r + 
   EPX74301.1 103 IKKQLPSGHQRDVFLVTSS-KDSSERQPLIVKKLlcnsKPKILSTSFKGFLQEIKVLSSLRHRGIVNLINYYLSPSDILLAESFYEGGDLYECTRFN- 198
                  6789999********9999.88899999999999444444555667899***********************************************9. PP

                  TTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE...............TTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHH CS
  Pkinase_Tyr  97 kekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse...............nkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslke 179
                   ++++ + + ++  ++ +++++L+++ lvHrdl   N+Ll++                 ++k+sDf  ++ +  d+e +  +++  + ++ apE+   
   EPX74301.1 199 YSSFSPNFVARIFGEIVQAVAFLHDQLLVHRDLKLENILLTKkykelkgaedlksfrFPLIKVSDFEFSKFV--DKENHIVQSEYGSPEYAAPEVYLG 294
                  *****************************************************999888*************..444444455677789*****9887 PP

                  SE.EEHHHHHHHHHHHHHHHHTTSSGTTTTSHHH CS
  Pkinase_Tyr 180 kk.ftsksDvWsfGvllwEiftlgespypglkne 212
                        k+D Ws G+ll+ +++ g+ p+  + + 
   EPX74301.1 295 IAhDGYKADCWSLGILLFAMME-GRLPFDAVPPF 327
                  7625689*************99.99999887655 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.21   6.3e+02     151     178 ..     152     182 ..     131     186 .. 0.75
   2 !   10.7   0.3     8e-05      0.24     152     255 ..     213     326 ..     200     353 .. 0.72

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.21
  Kinase-like 151 lqlirlaanLqakglvh...gkftvdnllld 178
                  lq i++  +L+++g+v      +++ ++ll 
   EPX74301.1 152 LQEIKVLSSLRHRGIVNlinYYLSPSDILLA 182
                  589***********98621145566666665 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 8e-05
  Kinase-like 152 qlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkv.vlseve.............kgfaPpEllgsrggytrknktkmthkldaWq 235
                  ++++ +a L+++ lvh +++ +n+ll +k +  l+g + L        ++s  e               +  pE  +          ++  +k d W 
   EPX74301.1 213 EIVQAVAFLHDQLLVHRDLKLENILLTKKYK-ELKGAEDLKSFRFPLiKVSDFEfskfvdkenhivqSEYGSPEYAAPEVY-LG--IAHDGYKADCWS 306
                  5788899999999999999999999998876.5666666654433220224444544445555566667777777777443.33..4777899***** PP

  Kinase-like 236 lGlviyriwclklPltlate 255
                  lG+  + +    lP++ + +
   EPX74301.1 307 LGILLFAMMEGRLPFDAVPP 326
                  ***************98755 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   1.9e-05     0.055     315     392 ..     214     298 ..     203     307 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.9e-05
  Pkinase_fungal 315 aIkghrsLflkagiLHrDiSenNilitdskke..........gerkglLiDLDlakelsddssesgarertGTleFmaievlkgeeHs 392
                      +++   L+ ++ ++HrD   +Nil+t + ke          + +   ++D+++ k +++ +++ + + + G +e+ a ev  g+ H 
      EPX74301.1 214 IVQAVAFLH-DQLLVHRDLKLENILLTKKYKElkgaedlksfRFPLIKVSDFEFSKFVDK-ENHIV-QSEYGSPEYAAPEVYLGIAHD 298
                     566777788.9999*************665545777767555777778889999999996.44444.679999999999999988885 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0     3e-05      0.09      93     155 ..     179     242 ..     144     252 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 3e-05
         Kdo  93 lllterlegaqdLedllakwae.laeelkrallkavgrliaklhragvnHadlyaknillqqee 155
                 +ll e   +  dL ++ +   + ++ +  ++++ ++ +++a lh+  + H+dl   nill ++ 
  EPX74301.1 179 ILLAESFYEGGDLYECTRFNYSsFSPNFVARIFGEIVQAVAFLHDQLLVHRDLKLENILLTKKY 242
                 5777888888888888885444799999999*****************************9875 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.38   1.1e+03       4      81 ..     106     193 ..     105     224 .. 0.61
   2 ?    9.0   0.0   0.00041       1.2     164     181 ..     222     239 ..     204     247 .. 0.80
   3 ?    1.2   0.0     0.094   2.8e+02     148     175 ..     358     391 ..     302     393 .. 0.62

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.38
                 EE--.SSCEEEEEEETT.-....-EEEEE........E-TTS-HHHHHHHHHHHHHHHHTT-B--B-CTTBS-EEETTEEEEEEE----EE CS
         APH   4 elsggasnrtylvttpa.g....ryvlrr........npparaaeeirrevallrlLakagvpvPevlagdtddeeigllfalieyvpgrs 81 
                 +l++g   +++lvt+++      +++++         +    +   + +e ++l  L+ +g+ v  ++ +  +  +i+l   ++e+ +   
  EPX74301.1 106 QLPSGHQRDVFLVTSSKdSserqPLIVKKllcnskpkILS-TSFKGFLQEIKVLSSLRHRGI-V-NLINYYLSPSDILLAESFYEGGDLYE 193
                 6888999999999977743667788888867665443222.356666677777777777777.4.66776677777666666666555544 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00041
                 S-EEEE-SS-SGGGEEEC CS
         APH 164 lptvllHgDlhpgNllvd 181
                  ++ l+H+Dl++ N+l++
  EPX74301.1 222 HDQLLVHRDLKLENILLT 239
                 57899***********99 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.094
                 HHHH........HHHHHHHH--SSS-EEEE-SS-SG CS
         APH 148 leeq........vlaalaallpgelptvllHgDlhp 175
                  e++        +  +++a+++  ++  l+H+D +p
  EPX74301.1 358 QEHEvagcsitrLDTWIEARAL--VQSLLIHRDSRP 391
                 2222445555558888888888..99*******766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (407 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       492  (0.0274416); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.53u 0.29s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 2755.90
//
Query:       EPX74302.1  [L=365]
Description: RNA polymerase II transcription termination factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      6e-17   62.2   3.4    6.7e-15   55.7   0.3    3.0  3  CTD_bind   RNA polymerase II-binding domain.
     0.0056   16.7   1.2      0.032   14.2   0.2    2.4  2  CTK3       CTD kinase subunit gamma CTK3


Domain annotation for each model (and alignments):
>> CTD_bind  RNA polymerase II-binding domain.
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.94   8.4e+03      50      58 ..      36      44 ..      30      49 .. 0.65
   2 !   55.7   0.3   7.5e-19   6.7e-15       1      63 []      55     117 ..      55     117 .. 0.99
   3 !    6.4   0.0    0.0018        16      10      44 ..     173     206 ..     171     235 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.94
    CTD_bind 50 lkrllniWe 58
                 ++++++W 
  EPX74302.1 36 ANEIIQLWL 44
                345555664 PP

  == domain 2  score: 55.7 bits;  conditional E-value: 7.5e-19
    CTD_bind   1 kLnllYLaNdvlqnskrkqkdefapaFapvlpeafadaykkapekikkklkrllniWeernvf 63 
                 kL llYL+N+v+q+s+ k+  ++++a ap+++ea+++ay++ p++ik k+k + ++W +r +f
  EPX74302.1  55 KLLLLYLINEVVQQSRVKKITDLIDAVAPFVVEAVSQAYASVPSTIKTKIKYVYDVWCQRAIF 117
                 899**********************************************************99 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.0018
    CTD_bind  10 dvlqns...krkq..kdefapaFapvlpeafadaykkape 44 
                 dvl++s   k  +  ++e+ ++F++ l++a+++    ++ 
  EPX74302.1 173 DVLYKSyeeK--SsdDPELNEKFKAQLVNAVSS----CER 206
                 8999996433..2569**************954....343 PP

>> CTK3  CTD kinase subunit gamma CTK3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.2   3.6e-06     0.032      12      74 ..      10      72 ..       6     105 .. 0.89
   2 ?   -0.2   0.1      0.11   9.7e+02      45      87 ..     201     244 ..     185     265 .. 0.67

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3.6e-06
                HHHTT--SSGGGTHHHHHHHHHTGGGHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHT CS
        CTK3 12 qlLrkLtasvqslqkaaqfAlknkdkeedlfscileqlesadlNtranilyfidllleeslke 74
                + L +L+  ++s++  a++ + +k  ++++ +  le l +a  N +  +ly+i+ ++++s  +
  EPX74302.1 10 AKLVTLNETQESITGIAHWVIYHKRYANEIIQLWLESLREAPSNKKLLLLYLINEVVQQSRVK 72
                56899**************************************************99998655 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.11
                 HHHHHHHS...-HHHHHHHHHHHHHHHHHHHHTT--S..THHHHHH CS
        CTK3  45 ileqlesa...dlNtranilyfidllleeslkegqsekspYveslk 87 
                 + + +e++   ++ +r  ++  +++ll++  ++ q+e+ + ++ l+
  EPX74302.1 201 V-SSCERThrlSVESRLALISSLETLLDNQRQQVQREE-ANISELT 244
                 4.345555555788888888899999998888888765.5555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (365 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1022  (0.0570026); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2605.10
//
Query:       EPX74303.1  [L=941]
Description: coatomer beta subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.6e-88  295.3  11.7    1.3e-87  294.6  11.7    1.3  1  Adaptin_N        Adaptin N terminal region
    1.1e-52  177.3   0.0    2.8e-52  176.1   0.0    1.7  1  Coatomer_b_Cpla  Coatomer beta subunit appendage platform
    6.5e-51  171.9   0.5    1.5e-50  170.7   0.1    1.9  2  Coatamer_beta_C  Coatomer beta C-terminal region
    4.6e-09   36.5  12.6    6.5e-09   36.0   0.2    4.2  5  Cnd1             non-SMC mitotic condensation complex subunit
    7.2e-07   29.5   0.3    0.00026   21.3   0.0    4.0  4  HEAT_2           HEAT repeats
     0.0064   17.1   0.0      0.043   14.4   0.0    2.5  1  HsdM_N           HsdM N-terminal domain
  ------ inclusion threshold ------
       0.01   16.0   0.0        2.6    8.5   0.0    4.2  4  HEAT             HEAT repeat
      0.021   15.0   0.0      0.053   13.6   0.0    1.8  1  Coatomer_g_Cpla  Coatomer subunit gamma-1 C-terminal appendag
      0.037   13.5   1.5       0.12   11.8   0.2    2.4  2  DUF5578          Family of unknown function (DUF5578)
      0.048   13.8   2.2        7.7    6.6   0.0    2.9  3  ParcG            Parkin co-regulated protein
       0.14   12.6   3.5        2.7    8.5   0.0    3.6  3  Telomere_reg-2   Telomere length regulation protein
       0.23   10.9   7.9       0.13   11.7   0.4    3.0  3  SPO22            Meiosis protein SPO22/ZIP4 like


Domain annotation for each model (and alignments):
>> Adaptin_N  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  294.6  11.7   8.4e-91   1.3e-87       5     481 ..      17     496 ..      13     526 .. 0.93

  Alignments for each domain:
  == domain 1  score: 294.6 bits;  conditional E-value: 8.4e-91
                 CCHHHHHHCCSSS-SCHHHHHHHHHHHHHHHCT---GHHHHHHHCCCC.SS-CHHHHHHHHHHHHHCTTSCC.....HHCCCCHHHHHHCCSSSHHHHH CS
   Adaptin_N   5 iqqelaeilnsnkdddekkkeavkkliylialGedvsflffevvklva.skdfelKrlvYlylellaeesed.....lalLvtnslqkDlkdpnqlirg 97 
                 ++++l+++l+s+  +d  k+ a+k ++ +i++G+++s ++++v+++v+ s + elK+l+Y y+e++++ ++d     +++L++ns+++Dl++pn++irg
  EPX74303.1  17 SSDQLKTALESK--NDFVKISAMKTILRIIINGDPLSSVLMHVIRFVMpSRNKELKKLLYYYWEICPKYNSDgtmkqEMILACNSFRNDLQHPNEYIRG 113
                 7899********..************************************************************************************* PP

                 HHHHHHCCC--CCCHHHHHHHHHHHHT-SSHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHCT.T-SSHHHHHHHHHHHHHHHCCCCCCCHHHHHHHC CS
   Adaptin_N  98 lALrvLssirvpelaedlapaikkllkdrspyvrkkAalailklykkdpdllrkqlveeikell.sdkdpgvvlaAvalleeikkndrlllkllpklvr 195
                  +Lr+L+++ +pel+e l p+++++l++r++yvrk+A+++++ +y+ +++l+++  ++ i++ l  +++  ++++A+ +l+ i  ++++++     l++
  EPX74303.1 114 ATLRFLCKLNEPELLEPLIPTVRQCLEHRHAYVRKNAIMSVFSIYQTSSHLIPDA-ASLIEDVLvVETEGTCKRNALIVLCTI-DPEHAAM----WLTN 206
                 ******************************************************8.9999998889*****************.6666644....4444 PP

                 CHHHHHHCS-HHHHHHHHHHHCC---SSHHHH..HHHHHHHCGGCGCSSCHHHHHHHHHCCHCCCCSTHHHCCHHCHHHHHH.SSCCTCHHHHHCHHHH CS
   Adaptin_N 196 rLcnllteldpwlqvkiiklltrlarqepeerskkellesllnllqssnnaVlletvnlivelapknelivlavnaLvrlls.skdenlryvaLrtllk 293
                 +++ + t+l+    +++i+++++ + ++ +++   +++  ll+ll+  + +V++e+   ++++  + ++i+ a+++L +l + + d+n +++ L++++ 
  EPX74303.1 207 NFDHI-TSLNASSLLIVIEFIRKIVIVNSPDK--TKYFSLLLELLHVNSSSVVFEASTSLMNMTTNIQIIKTAASRLLDLATrEADNNAKLIMLDRISD 302
                 44444.899999*************9999999..66**********************************************9**************** PP

                 HHHHXXTTTTTTTCCCCSXXTTSXHHHHHHHHHHHCCCXXTTTHHHHHHHHHHHTTSSXXHH......HHHHHHHHHHHHHHHSCCHHHHHHHHHHHHH CS
   Adaptin_N 294 ivkkepkavqhldlkifllktdddvsirlkaldlllklvdesNvkeivkeLkkyvkevaded......fksklvkaIgrlaekfatdaewvldvllell 386
                 +v++ ++ + +  +++    +++d +++ ka+ + l+lv+ +Nv+ i+++L+k++ ++++++       +++l +aI+++a++f++ a++ ++ ll ++
  EPX74303.1 303 LVQHVKSGLDDIVTDVLPFLASTDFDVCEKAISIILGLVTTRNVDDILEQLQKEL-SKSNGEsenddaRRRALTEAIHHCAITFPQTAATAIQYLLSHI 400
                 ****************99999**********************************.444555567788999**************************** PP

                 TTXXHHHHHHHHHHHHHHHHHSTTTSTTCHHHHCCTCCGXXSHHHHHHHHHHHHHTTTTXTT....HHHHHHCTTTTTTTSXHHHHHHHHHHHHHH CS
   Adaptin_N 387 slsgesvkdeivevirdliqkvpelheeiiekLaellekieseearaaaiWllGeygelvsnte.sasdllrslaekfvlesekvklqiltalvKl 481
                 s+ +++ +++++++++++++k+pel+   ++kL+  l++ +  ++ ++++W+ Gey+    +++  ++++  s+ e ++l+se+  l+ ++  ++ 
  EPX74303.1 401 SDFQSKSASSVLSFVKEVMEKFPELRSANLTKLLLSLKEFRAGKIFRGVVWIAGEYCFTEADIRtAWKSIRASIGEIPILASEEQLLNDVSDRQEQ 496
                 *********************************************************************************998777766655554 PP

>> Coatomer_b_Cpla  Coatomer beta subunit appendage platform
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  176.1   0.0   1.9e-55   2.8e-52       2     126 ..     812     937 ..     811     939 .. 0.96

  Alignments for each domain:
  == domain 1  score: 176.1 bits;  conditional E-value: 1.9e-55
  Coatomer_b_Cpla   2 rnvvilndikidimdyikpakiseeeFremWaefeWEnkiavktk.ltdlkeyleelvkktnmklltpeeeleeeaeflsanlyaksvfgedal 94 
                      ++vv+l+ i++++mdyikpa++ e++Fr+mW+efeWEnk+ ++++   +l e+l++l+kktnm++ltp+++l+++++flsanlya+s+fgedal
       EPX74303.1 812 DRVVNLSSISLNLMDYIKPASCPESKFRSMWTEFEWENKVDISSNeNINLMEFLHKLMKKTNMNCLTPDASLRGDCGFLSANLYARSIFGEDAL 905
                      689****************************************984567********************************************* PP

  Coatomer_b_Cpla  95 anvsiekeeegkisgvvRiRsktqgialslgd 126
                      + +s+ek+++g isg+vRiRsktqgial+lg+
       EPX74303.1 906 MSLSVEKSTNGPISGHVRIRSKTQGIALTLGS 937
                      ******************************97 PP

>> Coatamer_beta_C  Coatomer beta C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.1       5.8   8.7e+03      69     102 ..     240     273 ..     237     282 .. 0.63
   2 !  170.7   0.1     1e-53   1.5e-50       1     138 [.     670     804 ..     670     806 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 5.8
  Coatamer_beta_C  69 qfDivLdvlivNqtketLqnltvelatlgdlklv 102
                       f ++L++l vN ++  ++  t  +  + +++++
       EPX74303.1 240 YFSLLLELLHVNSSSVVFEASTSLMNMTTNIQII 273
                      5778888888887776666555555555555555 PP

  == domain 2  score: 170.7 bits;  conditional E-value: 1e-53
  Coatamer_beta_C   1 vddlisfrqlkekkelseeeeedlveedlsqatgakkkeeefasklkkvvqLtGfsDpvYaEayvkvnqfDivLdvlivNqtketLqnltvela 94 
                      +dd++s+rql+++ e++ e    ++e+d+ qa++     e+++skl++vv LtG++DpvY+Eayvk++qfDi+Ld+livN+t++tLqnl++ela
       EPX74303.1 670 PDDTLSIRQLSRAIEEKAE---ASFEADVIQAASDGIVVEDLSSKLDHVVSLTGYTDPVYVEAYVKIQQFDIILDILIVNRTDSTLQNLCLELA 760
                      59*********97755444...56********************************************************************** PP

  Coatamer_beta_C  95 tlgdlklvekpqsvtlaphdfakikatvkvsstetGvifGnivY 138
                      tlgdlk+ve+p++++lap++f++++at+kvsst++GvifG++ +
       EPX74303.1 761 TLGDLKIVERPSPLNLAPRAFNSVQATIKVSSTDSGVIFGAVSF 804
                      *****************************************988 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       2.5   3.7e+03      22      49 ..      17      45 ..       5      56 .. 0.76
   2 !   36.0   0.2   4.4e-12   6.5e-09       2     106 ..     111     216 ..     110     256 .. 0.85
   3 !    5.6   1.3      0.01        15      60     161 ..     241     338 ..     221     339 .. 0.83
   4 ?    0.1   0.1      0.49   7.4e+02     111     145 ..     388     422 ..     342     440 .. 0.56
   5 ?   -2.9   0.1       4.2   6.2e+03     110     131 ..     852     873 ..     814     876 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 2.5
        Cnd1 22 lvepLrkrLkDedpyVRktaaivvakL.i 49
                 +++L+++L+ ++  V+  a+ +++++ i
  EPX74303.1 17 SSDQLKTALESKNDFVKISAMKTILRIiI 45
                56788888888888888888888877744 PP

  == domain 2  score: 36.0 bits;  conditional E-value: 4.4e-12
        Cnd1   2 iRalairtlgcirvpnlveylvepLrkrLkDedpyVRktaaivvakLilndmvkekgflselakll.eDenprVvanalaalteiseksenaiynllpd 99 
                 iR+  +r l+ ++ p+l+e+l++ +r++L+ +++yVRk+a++ v  +++       +  s +++ l  +++ +   nal++l+ i  +   + ++++ d
  EPX74303.1 111 IRGATLRFLCKLNEPELLEPLIPTVRQCLEHRHAYVRKNAIMSVFSIYQTSSHLIPDAASLIEDVLvVETEGTCKRNALIVLCTIDPEHAAMWLTNNFD 209
                 9**********************************************999888888888888888879********************88899999999 PP

        Cnd1 100 iisklsd 106
                  i +l++
  EPX74303.1 210 HITSLNA 216
                 9999985 PP

  == domain 3  score: 5.6 bits;  conditional E-value: 0.01
        Cnd1  60 lselaklleDenprVvanalaalteiseksenaiynllpdiisklsd.alnecsewgqitilefLlsyipkdkqeaeslveklcprlqhansavvlaai 157
                 +s l++ll+ ++++Vv  a ++l+++ ++      ++ ++ +s+l+d a  e+++++   +l+ +++ ++  k+  +++v  + p l  +  +v  +ai
  EPX74303.1 241 FSLLLELLHVNSSSVVFEASTSLMNMTTNI-----QIIKTAASRLLDlATREADNNAKLIMLDRISDLVQHVKSGLDDIVTDVLPFLASTDFDVCEKAI 334
                 666777777777777777777777777765.....55666677776656679**************************************999999999 PP

        Cnd1 158 kviL 161
                 ++iL
  EPX74303.1 335 SIIL 338
                 9998 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 0.49
        Cnd1 111 csewgqitilefLlsyipkdkqeaeslveklcprl 145
                     + ++ l+ ++++++k+++   s v+ +++++
  EPX74303.1 388 TAATAIQYLLSHISDFQSKSASSVLSFVKEVMEKF 422
                 33444445555555555555555555555555444 PP

  == domain 5  score: -2.9 bits;  conditional E-value: 4.2
        Cnd1 110 ecsewgqitilefLlsyipkdk 131
                 ++s ++ i+ +efL + ++k++
  EPX74303.1 852 DISSNENINLMEFLHKLMKKTN 873
                 3677777888888888888765 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       8.7   1.3e+04       3      23 ..      20      39 ..      18      43 .. 0.63
   2 !   21.3   0.0   1.8e-07   0.00026       8      87 ..     104     192 ..      98     193 .. 0.86
   3 ?    0.6   0.0      0.52   7.8e+02      30      75 ..     238     288 ..     223     295 .. 0.76
   4 ?    2.0   0.5      0.18   2.7e+02      28      86 ..     310     377 ..     277     379 .. 0.58

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 8.7
      HEAT_2  3 aLlqalendpdpevrraaira 23
                +L  al +++++ v++ a ++
  EPX74303.1 20 QLKTAL-ESKNDFVKISAMKT 39
                566666.67777777776655 PP

  == domain 2  score: 21.3 bits;  conditional E-value: 1.8e-07
      HEAT_2   8 lendpdpevrraairaLgrignpea....lpaLvellededpavRraaaeaLgaig.d.....pealpaLkellddddddvvReaAaeaL 87 
                 l ++p++++r a++r L ++++pe+    +p+++++le+ +++vR++a+++   i  +     p+a+++ ++ l  +++   ++ A++ L
  EPX74303.1 104 L-QHPNEYIRGATLRFLCKLNEPELleplIPTVRQCLEHRHAYVRKNAIMSVFSIYqTsshliPDAASLIEDVLVVETEGTCKRNALIVL 192
                 6.79*******************88888899999999*************9976642234678999999999999999999999988776 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.52
      HEAT_2  30 pealpaLvellededpavRraaaeaLgaigd.....pealpaLkelldddd 75 
                 ++++ +L+ell   ++ v  +a ++L  + +     + a++ L++l++++ 
  EPX74303.1 238 TKYFSLLLELLHVNSSSVVFEASTSLMNMTTniqiiKTAASRLLDLATREA 288
                 467788999999999999999999999887645555667777777777665 PP

  == domain 4  score: 2.0 bits;  conditional E-value: 0.18
      HEAT_2  28 gnpealpaLvellededpavRraaae.aLgaigd.......pealpaLkell.ddddddvvReaAaea 86 
                 g ++++  ++++l ++d +v + a+   Lg + +       ++  + L ++   +++dd +R+a +ea
  EPX74303.1 310 GLDDIVTDVLPFLASTDFDVCEKAISiILGLVTTrnvddilEQLQKELSKSNgESENDDARRRALTEA 377
                 45688888999999999999999996466766541121122333344443221345566666666666 PP

>> HsdM_N  HsdM N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   2.9e-05     0.043      20     103 ..     332     427 ..     326     447 .. 0.72

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 2.9e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHCC........--..--------.........S-C......CCSHHHHHHS..--HHHHHHHHHHCHHHHCT--S CS
      HsdM_N  20 eykeyilgLlFlKrlddveeereeklleeyken.aleeleeklksk.....eafyipe......elrWkelakk..kdddelgenlnkafpaleelnk 103
                 + +  ilgL+  + +dd++e+ +++l ++++e+ +++++++ l +       +f   +      ++ ++++++   k++++++++++++++++ el +
  EPX74303.1 332 KAISIILGLVTTRNVDDILEQLQKELSKSNGESeNDDARRRALTEAihhcaITFP--QtaataiQYLLSHISDFqsKSASSVLSFVKEVMEKFPELRS 427
                 67899*********************88866664223334433333444452222..23466679***9999998877779*******9999988865 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0       1.1   1.7e+03       5      27 ..      21      43 ..      19      45 .. 0.85
   2 ?    0.5   0.0      0.67     1e+03       9      27 ..     104     122 ..      98     124 .. 0.85
   3 ?    8.5   0.0    0.0018       2.6       1      24 [.     131     154 ..     131     160 .. 0.89
   4 ?   -0.9   0.0       1.9   2.8e+03       3      28 ..     242     267 ..     241     270 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 1.1
                HHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT  5 llkllsDpspeVReaAakaLgal 27
                l ++l++++ +V  +A k++ ++
  EPX74303.1 21 LKTALESKNDFVKISAMKTILRI 43
                567899**********9999776 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.67
                 HT-SSHHHHHHHHHHHHHH CS
        HEAT   9 lsDpspeVReaAakaLgal 27 
                 l++p+  +R a+++ L++l
  EPX74303.1 104 LQHPNEYIRGATLRFLCKL 122
                 89**********9999876 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.0018
                 HHHHHHHHHT-SSHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaL 24 
                 l+P++ ++l++ ++ VR++A+ ++
  EPX74303.1 131 LIPTVRQCLEHRHAYVRKNAIMSV 154
                 79******************9876 PP

  == domain 4  score: -0.9 bits;  conditional E-value: 1.9
                 HHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   3 PlllkllsDpspeVReaAakaLgala 28 
                  lll+ll+ +s++V   A  +L ++ 
  EPX74303.1 242 SLLLELLHVNSSSVVFEASTSLMNMT 267
                 589****9999999999999988876 PP

>> Coatomer_g_Cpla  Coatomer subunit gamma-1 C-terminal appendage platform
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   3.6e-05     0.053       2     111 ..     826     935 ..     825     939 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 3.6e-05
                      GGEEE---S..-HHHHHHHH-STT-EEEEEEESS---HHHHHHHHHHHHT-EE-TTTT---SS-SEEEEEEEEEETTS-EEEEEEEEEE..SS. CS
  Coatomer_g_Cpla   2 Dyikpvavs..nFeaaWeeleseaeavetfaLssvksleeavdkliellgmqplegsdkvpenassHtLklaGkfvggekvlvrarlalssskg 93 
                      Dyikp++ +  +F+++W e e e ++v+ ++ ++  +l e  +kl++ ++m+ l        +    + +l+  ++ ge+ l+++++ +s+++ 
       EPX74303.1 826 DYIKPASCPesKFRSMWTEFEWE-NKVD-ISSNENINLMEFLHKLMKKTNMNCLTPDASLRGDCGFLSANLYARSIFGEDALMSLSVEKSTNGP 917
                      9*****99888*********994.4444.444466899**************999999888888899*************************** PP

                      EEEEEEEEESSHHHHHHH CS
  Coatomer_g_Cpla  94 vtlkltvRsedeevaelv 111
                      +  ++ +Rs+++ +a ++
       EPX74303.1 918 ISGHVRIRSKTQGIALTL 935
                      ***********9998766 PP

>> DUF5578  Family of unknown function (DUF5578)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.2   8.1e-05      0.12     199     263 ..     290     354 ..     246     359 .. 0.81
   2 ?   -0.7   0.1      0.52   7.8e+02     207     263 ..     376     434 ..     363     439 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 8.1e-05
     DUF5578 199 pkaqqlalqtlrvvqeivkeakpsivepllelLkslhlevqyeaielikelmstevraallkglv 263
                  +a+ ++l+ +  + ++vk+    iv  +l  L+s++++v  +ai++i  l++t   +++l++l 
  EPX74303.1 290 NNAKLIMLDRISDLVQHVKSGLDDIVTDVLPFLASTDFDVCEKAISIILGLVTTRNVDDILEQLQ 354
                 456667779999999999**********************************9988888998885 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.52
     DUF5578 207 qtlrvvqeivkeakpsivepllelLkslhlevqyeaielikelmst..evraallkglv 263
                 ++++    + +++  + ++ ll+ ++  +++  + +++++ke+m++  e+r+a l++l+
  EPX74303.1 376 EAIHHCAITFPQTAATAIQYLLSHISDFQSKSASSVLSFVKEVMEKfpELRSANLTKLL 434
                 67777777888888888899999999999999999999999998765677777777765 PP

>> ParcG  Parkin co-regulated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.1    0.0098        15      85     130 ..      21      66 ..      19      75 .. 0.89
   2 ?    6.6   0.0    0.0052       7.7      85     145 ..     100     158 ..      91     193 .. 0.81
   3 ?   -2.3   0.1       2.8   4.1e+03      85     109 ..     318     342 ..     251     364 .. 0.57

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0098
       ParcG  85 lkeaLntrdeeviesaLkvlqklvkaseligeaLvpyyrqlLpvln 130
                 lk+aL+++++ v +sa+k++ +++  ++  ++ L+  +r ++p  n
  EPX74303.1  21 LKTALESKNDFVKISAMKTILRIIINGDPLSSVLMHVIRFVMPSRN 66 
                 8***********************9999999999999998888776 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0052
       ParcG  85 lkeaLntrdeeviesaLkvlqklvkaseligeaLvpyyrqlLpvlnlfknkrvnlgdkidy 145
                  +++L++ +e +  ++L+ l kl   ++   e L+p  rq L +  ++ +k+  ++    y
  EPX74303.1 100 FRNDLQHPNEYIRGATLRFLCKL--NEPELLEPLIPTVRQCLEHRHAYVRKNAIMSVFSIY 158
                 799********************..899999***************999999666555555 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 2.8
       ParcG  85 lkeaLntrdeeviesaLkvlqklvk 109
                 +   L ++d +v+e+a++++  lv+
  EPX74303.1 318 VLPFLASTDFDVCEKAISIILGLVT 342
                 2223444444444444444444443 PP

>> Telomere_reg-2  Telomere length regulation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.0    0.0018       2.7      58      88 ..     178     208 ..     133     225 .. 0.77
   2 ?    2.8   0.2       0.1   1.5e+02       5      84 ..     316     392 ..     314     437 .. 0.73
   3 ?   -2.3   0.1       4.2   6.2e+03      44      83 ..     559     598 ..     554     620 .. 0.60

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0018
  Telomere_reg-2  58 ienfeelrlnalvallvatpekvaeylteef 88 
                     +e+  + ++nal+ l++ +pe++a +lt++f
      EPX74303.1 178 VETEGTCKRNALIVLCTIDPEHAAMWLTNNF 208
                     55556789*********************98 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.1
  Telomere_reg-2   5 kdllelLrdkddyekieaaLksaeeLirrkadeveenaveLataLltledkfdienfeelr.lnalvallvatpekvaeyl 84 
                      d+l +L  + d +  e+a++ +  L+    ++v+++ ++L + L + + + + ++  +    +a+  ++++ p+++a+  
      EPX74303.1 316 TDVLPFLA-STDFDVCEKAISIILGLVTT--RNVDDILEQLQKELSKSNGESENDDARRRAlTEAIHHCAITFPQTAAT-A 392
                     68999999.66779999999999999984..457789999999998888776555555444134555556666665553.3 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 4.2
  Telomere_reg-2  44 eLataLltledkfdienfeelrlnalvallvatpekvaey 83 
                      La+aL +l  +f+  + +  rlnal a ++   ++++++
      EPX74303.1 559 VLASALTKLVMRFHQISDNLERLNALRAEATLIMTSIIRV 598
                     5666666666666555555556666665555555555544 PP

>> SPO22  Meiosis protein SPO22/ZIP4 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.8     0.087   1.3e+02     156     231 ..     233     307 ..     215     318 .. 0.70
   2 ?   11.7   0.4   8.8e-05      0.13     135     207 ..     362     437 ..     322     444 .. 0.76
   3 ?   -2.3   0.0       1.6   2.4e+03      98     114 ..     608     627 ..     559     662 .. 0.69

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.087
       SPO22 156 lseanfklilslikrlaeksaalavrvldylldrklsfersedvvekllvalfflltqskkeed...aiealedilaal 231
                  s  + k +  l+ +l+ +s+++++++  +l++       + +++ ++   l++l+t++ + +    +++ ++d+++++
  EPX74303.1 233 NSPDKTKYFSLLLELLHVNSSSVVFEASTSLMN----MTTNIQIIKTAASRLLDLATREADNNAkliMLDRISDLVQHV 307
                 4666677777888999999*********99999....567777899999999999999444444334444444444443 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 8.8e-05
       SPO22 135 kreadeeeieealeemidsve.....lseanfklilslikrlaeksaalavrvldylldrklsfersedvvekllval 207
                  ++ ++++ + al+e i++        + ++++ +ls+i+++ +ksa+ ++ +++++++ k++  rs + + kll++l
  EPX74303.1 362 GESENDDARRRALTEAIHHCAitfpqTAATAIQYLLSHISDFQSKSASSVLSFVKEVME-KFPELRSAN-LTKLLLSL 437
                 5666777777788888887777777888999****************************.677677777.88888876 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 1.6
       SPO22  98 dqeesyekalkavell...q 114
                  +++s+e+ l+++++l   +
  EPX74303.1 608 IDDDSIERILSCIKVLysfE 627
                 46778888888888885551 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (941 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       753  (0.041999); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.75u 0.27s 00:00:01.02 Elapsed: 00:00:00.43
# Mc/sec: 6548.69
//
Query:       EPX74304.1  [L=1196]
Description: myosin type I [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   4.1e-233  775.5   3.8     5e-233  775.2   3.8    1.1  1  Myosin_head      Myosin head (motor domain)
    1.5e-46  158.4   0.4    3.7e-46  157.2   0.4    1.7  1  Myosin_TH1       Unconventional myosin tail, actin- and lipid
    1.7e-13   50.0   0.4    1.1e-12   47.4   0.1    2.5  3  SH3_1            SH3 domain
    2.4e-10   40.1   0.0    1.7e-09   37.4   0.0    2.4  2  SH3_9            Variant SH3 domain
    2.5e-08   33.4   0.0    8.5e-08   31.8   0.0    2.0  1  SH3_2            Variant SH3 domain
  ------ inclusion threshold ------
      0.021   15.1   0.0       0.11   12.7   0.0    2.3  1  AAA_22           AAA domain
      0.022   14.3   0.2        5.9    6.4   0.0    2.5  2  Hpr_kinase_C     HPr Serine kinase C-terminal domain
      0.044   14.1   0.6       0.13   12.5   0.2    2.1  2  SH3_3            Bacterial SH3 domain
      0.053   13.9   0.0       0.15   12.4   0.0    1.7  1  AAA_16           AAA ATPase domain
       0.11   12.2   0.2       0.97    9.1   0.1    2.4  2  PRK              Phosphoribulokinase / Uridine kinase family
       0.15   12.1   0.0       0.33   10.9   0.0    1.5  1  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
       0.16   11.7   0.0       0.31   10.7   0.0    1.4  1  Sigma54_activat  Sigma-54 interaction domain
        3.8    7.6   8.9        1.9    8.5   5.7    2.2  2  IQ               IQ calmodulin-binding motif


Domain annotation for each model (and alignments):
>> Myosin_head  Myosin head (motor domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  775.2   3.8  3.6e-236    5e-233       1     677 []      42     707 ..      42     707 .. 0.96

  Alignments for each domain:
  == domain 1  score: 775.2 bits;  conditional E-value: 3.6e-236
                  -SBGCGSSS-SHHHHHHHHHHHHHTT--EEEETTEEEEE--SS--STSSHHHHHHHTTS-GGGSSSSHHHHHHHHHHHHHHHTSEEEEEEESSTTSSH CS
  Myosin_head   1 vedlveLsllneasvlenlkkRykkdliYtysglvlvavnPykklkiysedvikaykgkkreelpPHifaiadeayrslledkenqsilisGEsGAGK 98 
                  v+dl+ Ls+++e+++ +nl+ R+ + +iYty+g+vl++vnP++ l iy+ dv+k+y+gk+r e  PH++aia++ay ++++++enq+i+isGEsGAGK
   EPX74304.1  42 VDDLTLLSKISEDEINKNLELRFRNGEIYTYIGHVLISVNPFRDLGIYTMDVLKSYQGKNRLETSPHVYAIAENAYYQMKSYHENQCIIISGESGAGK 139
                  69************************************************************************************************ PP

                  HHHHHHHHHHHHHHSSSSSCTCTTHHHHHHHHHHHHHHHHHEEEESSETTEESSEEEEEEEEETTSSEEEEEEEEECE-GGGGT---TT--SBHHHHH CS
  Myosin_head  99 teatKkvlqylasvaeskekveeeeleekilqsnPilEafGnAktvrndnssRFGKfieiefdakgkiagakietYLLEksRvvkqakeERnyHiFYq 196
                  tea+K+++qy++ v++s   +e e+++e il++nP+lE+fG Akt+rn+nssR GK++e+ f+ +g ++gaki++YLLEk R+v+q ++ERn+HiFYq
   EPX74304.1 140 TEAAKQIMQYITHVSKSVG-TEIEKVSEIILATNPLLESFGCAKTLRNNNSSRHGKYLEMIFNPSGAPIGAKITNYLLEKNRIVHQVRNERNFHIFYQ 236
                  ****************999.799*************************************************************************** PP

                  HHHCSTHHHHHHTT--TCCGSTTTTTTSSSSBTTS-HHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHCTSSEEEECTTSSEEESSHHHHHHHHH CS
  Myosin_head 197 llagaseeekkelkledvkdyaylsqsgeltvdgiddseefketkkaldilglseeeqkeifrivaailhlGniefkkeakdeqavledeeklekaae 294
                  + ++a+++ ++++ ++ +++y y+s s++++vdg++d+++f+ t++a++++g++e+eq eif+i+a+il lGni+f++ +++  +v++d++  e    
   EPX74304.1 237 FTKSAPQKYRDAYGIQGPESYLYTSASQCFSVDGMSDERDFQGTVNAMQVIGITESEQDEIFKIIAIILWLGNIQFQEGPDG-GSVITDKSISEFLGY 333
                  ******************************************************************************9987.5888888889999** PP

                  HHTS-HHHHHHHHHSEEEEET.....TEEEEEE-BHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS-S-SEEEEEEEEE-B---SSB-HHHHHH CS
  Myosin_head 295 llgvdaeelekalvkrriktg.....kevvskalnveqaevardalakaiyerlFdwlverinkslekkkeekksfiGvLDiaGFEifeknsFEqlci 387
                  l+g +a  +ekal+ r ++t+      +v+ ++ln +qa   rdala a+y+ lFdw+ver+nk+l ++ ++ ++ iG+LDi+GFEife+nsFEqlci
   EPX74304.1 334 LIGASAPLIEKALTIRIMQTQhgsrrGSVYEVPLNPTQALAVRDALAMALYNCLFDWIVERVNKALVTSDRSANTSIGILDIYGFEIFEHNSFEQLCI 431
                  ********************99999899********************************************************************** PP

                  HHHHHHHHHHHHHHHCHHHHHHHHHTTSSGCGS-GGGCCHHHHHHHHS.SSTSHHHHHHHHHTSTTS....-HHHHHHHHHHHHTTSTTEEETTSTTT CS
  Myosin_head 388 nyvnEkLqqlFnelvlklEqeeYvrEgiewkfidfgldnqaiidLiek.kplGilslLdeecllpka....tdetfleklvkafskhakfeksrlkkg 480
                  nyvnEkLqq+F+el+lk+EqeeYvrE+iew+ i++ ++n+ ++dLie+ +p G+++ +++   +++a     d+ f+++l+   s++++fe       
   EPX74304.1 432 NYVNEKLQQIFIELTLKTEQEEYVREQIEWTPIKY-FNNKVVCDLIESkRPPGLFAAMNDAIATAHAdssaADNAFAQRLN-FLSSNPHFEPR----- 522
                  ***********************************.***********9789********9999888744457888888885.34778889544..... PP

                  TTEEEEEETTCEEEEE-TTHHHHHH----HHHHHHHHTSSSHHHHHHCCSHCHB--.........CSSSECCCCCSBHHHHHHHHHHHHHHHHCTSEE CS
  Myosin_head 481 eakFiikHyAgkveYevegfleKnkDtlnedlvellksskkkllaelfkeeekeakaeakksekkkkkkkkkkkfktvgskfkeslaeLmktlestnp 578
                  +++Fi+kHyAg+v+Y++ g  +KnkD+l +d+++l++ss++++l+++f+  ++               ++ ++++ t+g ++k s ++L++tl +++p
   EPX74304.1 523 QTQFIVKHYAGDVTYDTMGMTDKNKDQLATDILNLVHSSSNNFLKSIFPAPQE---------------TNARRRPPTAGDRIKASANDLVDTLMKCQP 605
                  69***********************************************9442...............3344579*********************** PP

                  EEEEEE-SSSS--TT---HHHHHHHHHHTTHHHHHHHHHHSSSEEEEHHHHHHHHGGGSTTSS-SS....SSSHHHHHHHHHHHTTS-GCGEEECSSE CS
  Myosin_head 579 hfvRCikpnekkkakkldeslvleqlrclGvlegirirraGfpnRitfeefvqrYkllakkelkkl...lkedakkaveailkeleldkeeykiGktK 673
                   ++R ikpn++k+++++d+++vl+q+++lG+ e+irirraGf++R++f+ f qr+++l++k+       +++d+ +a+e+ilk++++   ey++G++K
   EPX74304.1 606 SYIRTIKPNQTKSPQDYDTRMVLHQVKYLGLQENIRIRRAGFAYRQAFDTFAQRFSVLSSKTSYAGeytWQGDDTTACEQILKDTNIPPTEYQMGTSK 703
                  *************************************************************99877889***************************** PP

                  EEET CS
  Myosin_head 674 iFfr 677
                  +F++
   EPX74304.1 704 VFIK 707
                  **97 PP

>> Myosin_TH1  Unconventional myosin tail, actin- and lipid-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.2   0.4   2.6e-49   3.7e-46       1     187 []     765     958 ..     765     958 .. 0.95

  Alignments for each domain:
  == domain 1  score: 157.2 bits;  conditional E-value: 2.6e-49
  Myosin_TH1   1 kvlasellkgkKerrrfsll..rkFegDYLglenesevgkelkkkvgkdqdekvlFssr....vkKlnrssksskrilvlTdkalylldpkkvk..... 88 
                 ++++s+ll+gkKerrr+s+l  rkF+gDYL+ ++      +l +++g ++ + v+Fs r    v+Kl+rssk+s+r lvlT+kalyl+ +k v      
  EPX74304.1 765 RDEGSKLLQGKKERRRYSMLgsRKFHGDYLSASK---PNGTLWSTCGLSSGDVVIFSMRcevlVHKLGRSSKPSPRQLVLTKKALYLVITKIVDhqltq 860
                 799****************************944...588999999********************************************998899*** PP

  Myosin_TH1  89 vlkrriplseItsvsvsplqDdlvvlhlke.skgDllleldfktElvtklskaykkktnkklkvkisdtieyklkkkktrtvkfqkd...kgkdsyksl 183
                 +++++ p+++I+sv +++lqDd+v+++ k+  +gD++l + fktEl+t+l     +  n++++v +++tiey  k++kt tvk+qk+   ++ d yks+
  EPX74304.1 861 QVEKKFPVASIDSVNLTNLQDDWVAVRNKSsPDGDMFLRCFFKTELITIL-----RSINRQIQVVVGPTIEYCRKQGKTLTVKTQKEetaNDYDYYKSS 954
                 ***************************8874489****************.....9*****************************987655599***** PP

  Myosin_TH1 184 tvsv 187
                 t++v
  EPX74304.1 955 TIRV 958
                 *987 PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       1.7   2.3e+03      13      23 ..      61      71 ..      58      75 .. 0.88
   2 ?   -2.1   0.0       2.3   3.1e+03      25      39 ..     876     890 ..     874     892 .. 0.79
   3 !   47.4   0.1   7.9e-16   1.1e-12       1      48 []    1098    1143 ..    1098    1143 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 1.7
                BXEBSTTEEEE CS
       SH3_1 13 ELsfkkGDvii 23
                EL f+ G++++
  EPX74304.1 61 ELRFRNGEIYT 71
                9********97 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 2.3
                 EEECSSSEEEEEETT CS
       SH3_1  25 leksedgWwkgrlkg 39 
                 l    d+W+ +r+k+
  EPX74304.1 876 LTNLQDDWVAVRNKS 890
                 5667889*****985 PP

  == domain 3  score: 47.4 bits;  conditional E-value: 7.9e-16
                  EESSSBEXSSTTBXEBSTTEEEEEEEECSSSEEEEEETTSTEEEEEEG CS
       SH3_1    1 iAlYDYeaeesdELsfkkGDviivleksedgWwkgrlkgtgkeGliPs 48  
                  iAlYD+++++++E+s+kk+++++++ k+ +gWw +  +  g eG++P+
  EPX74304.1 1098 IALYDFTGRSANEMSIKKDEILEIVLKEPSGWWLAVKN--GLEGWVPA 1143
                  7*************************************..57*****6 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       1.7   2.4e+03      12      24 ..      61      73 ..      57      75 .. 0.87
   2 !   37.4   0.0   1.2e-12   1.7e-09       1      49 []    1099    1147 ..    1099    1147 .. 0.97

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.7
       SH3_9 12 eLsLqrGDvitvi 24
                eL+++ G+++t i
  EPX74304.1 61 ELRFRNGEIYTYI 73
                9********9976 PP

  == domain 2  score: 37.4 bits;  conditional E-value: 1.2e-12
       SH3_9    1 AlypyepreddeLsLqrGDvitvieesedgWlegsltGrtGlvPanyve 49  
                  Aly+++ r++ e+s+ +++++ +  ++ +gW+++ ++G  G+vPa+yv+
  EPX74304.1 1099 ALYDFTGRSANEMSIKKDEILEIVLKEPSGWWLAVKNGLEGWVPATYVT 1147
                  8**********************9777********************96 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.8   0.0   6.1e-11   8.5e-08       2      56 ..    1097    1148 ..    1096    1149 .. 0.95

  Alignments for each domain:
  == domain 1  score: 31.8 bits;  conditional E-value: 6.1e-11
                  EEESS-B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEECCCEEEEEGCGEEE CS
       SH3_2    2 vraiedyvgedkseLsfkkGdvikvlslgskdsdgwwegevgGrvGlfPsslvee 56  
                  ++a+ d++g + +e+s+kk++++ ++    k++ gww++ ++G  G++P ++v e
  EPX74304.1 1097 YIALYDFTGRSANEMSIKKDEILEIV---LKEPSGWWLAVKNGLEGWVPATYVTE 1148
                  78999*********************...99*********************976 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   8.3e-05      0.11       4      27 ..     125     148 ..     121     181 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 8.3e-05
      AAA_22   4 tagilvvtGesGtGKTtllrrlle 27 
                 + +++++ GesG+GKT  ++++++
  EPX74304.1 125 ENQCIIISGESGAGKTEAAKQIMQ 148
                 679****************99876 PP

>> Hpr_kinase_C  HPr Serine kinase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0    0.0042       5.9      21      40 ..     129     148 ..     125     157 .. 0.89
   2 ?    5.1   0.0      0.01        14      78     149 ..     410     478 ..     406     496 .. 0.91

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0042
                   EEEEESTCHHHHHHHHHHHT CS
  Hpr_kinase_C  21 vLitGesgvGKselaleLik 40 
                   ++i Gesg GK+e+a ++++
    EPX74304.1 129 IIISGESGAGKTEAAKQIMQ 148
                   89*************98765 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.01
                   TEEEEHHHHH-GGGB-SEEEEEEEEEEESTT---TTTSTTSS-EEEEETTEEEEEEEEE--TTS-HHHHHHH CS
  Hpr_kinase_C  78 lGiidvkklfGaeavrekkeielvveLeewekkkeydrlgleeetkeilgvkvpkvtipvkpgrnlaviiea 149
                   +Gi+   +++G e +++++  +l+++ ++ + ++ + +l+l++e++e++  +++ + i   + + +  +ie+
    EPX74304.1 410 IGIL---DIYGFEIFEHNSFEQLCINYVNEKLQQIFIELTLKTEQEEYVREQIEWTPIKYFNNKVVCDLIES 478
                   4555...57*********************************************999999999999999986 PP

>> SH3_3  Bacterial SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       8.1   1.1e+04      24      41 ..     873     888 ..     871     892 .. 0.74
   2 ?   12.5   0.2   9.7e-05      0.13      19      54 ..    1113    1146 ..    1107    1147 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 8.1
       SH3_3  24 kVevleetgggeWykvrt 41 
                  V+++  +++  W+ vr+
  EPX74304.1 873 SVNLTNLQDD--WVAVRN 888
                 5777778888..*99966 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 9.7e-05
       SH3_3   19 lpyGekVev.leetgggeWykvrtddgteGwvssgyl 54  
                  +++ e +e+ l+e  g  W+     +g eGwv ++y+
  EPX74304.1 1113 IKKDEILEIvLKEPSG--WWLA-VKNGLEGWVPATYV 1146
                  6677778875777777..9888.8************8 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   0.00011      0.15      17      49 ..     119     151 ..     110     176 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00011
      AAA_16  17 ervrsgrpelvllsGesGvGKsslvrellrale 49 
                 ++ + ++ +++++sGesG GK+  +++++++++
  EPX74304.1 119 QMKSYHENQCIIISGESGAGKTEAAKQIMQYIT 151
                 444444459******************998765 PP

>> PRK  Phosphoribulokinase / Uridine kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.56   7.7e+02       6      63 ..      17      75 ..      15     115 .. 0.74
   2 ?    9.1   0.1    0.0007      0.97       2      37 ..     129     165 ..     128     192 .. 0.73

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.56
         PRK  6 gsSGaGkttvarklekifgrekvkaaei...egdsflrldraekdleleerkrakekevsf 63
                ++SG G++t  rk   +f+++ +k++++   ++ s ++ d+++k+lel+ r+++    + +
  EPX74304.1 17 APSGTGQSTGVRKA--VFQGNRKKTVGVddlTLLSKISEDEINKNLELRFRNGEIYTYIGH 75
                689****9998874..566667776666666888999999999999888887776555555 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0007
         PRK   2 IgvagsSGaGkttvarklekifgrekvk.aaeiegds 37 
                 I ++g+SGaGkt  a+++ + + ++++   +eie +s
  EPX74304.1 129 IIISGESGAGKTEAAKQIMQYITHVSKSvGTEIEKVS 165
                 7799*****************9966554123344444 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00024      0.33      18      45 ..     120     152 ..     104     159 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00024
                 H.....TEEEEEEESTTSSHHHHHHHHHHHTT- CS
        TsaE  18 l.....gdvilLeGdLGaGKTtlvrglakalgv 45 
                 +     +++i+++G+ GaGKT  ++++++ + +
  EPX74304.1 120 MksyheNQCIIISGESGAGKTEAAKQIMQYITH 152
                 223345678*******************98865 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00022      0.31      19      49 ..     123     153 ..     107     184 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00022
                      CTSSS-EEEECSTTSSHHHHHHHHHHHSTTT CS
  Sigma54_activat  19 aktdlsvlitGesGtGKellaraiheaskrk 49 
                       + +  ++i GesG+GK+  a++i +  ++ 
       EPX74304.1 123 YHENQCIIISGESGAGKTEAAKQIMQYITHV 153
                      34556799****************9865543 PP

>> IQ  IQ calmodulin-binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   5.7    0.0013       1.9       4      18 ..     727     741 ..     727     743 .. 0.93
   2 ?   -1.7   0.0       2.6   3.6e+03       2      11 ..     743     752 ..     742     752 .. 0.88

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0013
                 HHHHHHHHHHHHHHH CS
          IQ   4 aikIQaawRGylaRk 18 
                 ai+IQ+awR+y+ R+
  EPX74304.1 727 AIRIQRAWRAYVRRR 741
                 8***********998 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 2.6
                 HHHHHHHHHH CS
          IQ   2 kaaikIQaaw 11 
                 +aa  IQ+ w
  EPX74304.1 743 EAASSIQKLW 752
                 69999***99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1196 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       907  (0.0505884); expected 358.6 (0.02)
Passed bias filter:                      586  (0.0326845); expected 358.6 (0.02)
Passed Vit filter:                        90  (0.0050198); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.92u 0.30s 00:00:01.22 Elapsed: 00:00:00.45
# Mc/sec: 7972.22
//
Query:       EPX74305.1  [L=469]
Description: monooxygenase Coq6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.4e-22   79.2   0.0    1.6e-20   73.6   0.0    2.2  1  FAD_binding_3  FAD binding domain
    0.00052   19.2   0.0       0.59    9.1   0.0    2.6  3  Lycopene_cycl  Lycopene cyclase protein
     0.0031   16.6   0.0     0.0046   16.0   0.0    1.2  1  SE             Squalene epoxidase
  ------ inclusion threshold ------
       0.01   16.1   0.0      0.023   14.9   0.0    1.6  1  NAD_binding_8  NAD(P)-binding Rossmann-like domain
       0.02   14.1   0.0      0.035   13.3   0.0    1.3  1  Thi4           Thi4 family
      0.047   13.7   0.0      0.088   12.8   0.0    1.4  1  NAD_binding_9  FAD-NAD(P)-binding
      0.049   12.8   0.0      0.084   12.0   0.0    1.3  1  K_oxygenase    L-lysine 6-monooxygenase (NADPH-requiring)
        0.2   10.8   0.0       0.41    9.8   0.0    1.5  2  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase


Domain annotation for each model (and alignments):
>> FAD_binding_3  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.6   0.0   7.3e-24   1.6e-20       2     323 ..      29     397 ..      28     407 .. 0.77

  Alignments for each domain:
  == domain 1  score: 73.6 bits;  conditional E-value: 7.3e-24
                    EEEEEE--SHHHHHHHHHHHHTTHH............EEEEESSSSSCCSSS--EEEHHHHHHHHHTT-HHHHHHHSEECCCCEEEEEEECCCC.. CS
  FAD_binding_3   2 tdVlIVGaGpaGlmlallLseaGvr............vvlvekrsttvvlpradglnqrtmellrqlGledrilaegapnelmgealynelsdt.. 83 
                    +d+ IVG+Gp+Gl la  L++                ++ +  ++ t++  r   + +r+   ++ +G +d +++e   +  ++++ y  + +   
     EPX74305.1  29 YDITIVGTGPVGLALAAGLQTNPYTrslkvaildnqnTMKIQDWNPTSYSNRCVSVMSRSRKFFERIGAWDLMRKER-LQPFQHIIAYDGITNSki 123
                    7899****************997668999999999988889999999****************************99.788899999999555544 PP

                    .CEEEEEHHCHHCST-CEE--HHHHHHHHHHHHHHHTEEETCSEEEECCEECCCCCCCEEEECCTTEEEEEEEEEEEE--GTT-HHHHHHTGGEEE CS
  FAD_binding_3  84 .pkaradlelesspervtvypqteleriLvehaeerglqvrfktevesleqdeegvtaevrdketgeeetvrakYlvGaDGgrStvrktlgiefeg 178
                      + + d e     ++  v  q  l+r ++++   +  +++f    + +e+ +  +++++    t ++  +r + lvGaDG +S+vr+  +ie++g
     EPX74305.1 124 hFDQPKDRE-PMAFMAENVNLQYGLLRSILKRKDLHQDKFDFLVPCN-IEEITRDEHTNIPCIHTSTHGILRTRLLVGADGRNSIVRRFSKIEMPG 217
                    423333333.3334444455566677777666666665555555544.44444455556666666677789************************* PP

                    EEEEEEEEEEEEEEEC..-SCCCTTC.......CEEEEECCTTEE..........................EEEECCETEEEEEEEEECCE-GGGS CS
  FAD_binding_3 179 eetvyeagvldvlfda..dlsdivep.......lvlilsaesrgv..........................mviPlentlerfyvqvearaekeer 239
                       +   gv+++l  +  +l++++ +       l +++ + ++                            +   l++ + ++++ ++++++++ +
     EPX74305.1 218 WAYS-SHGVVGTLRVShnNLPSVAFQrflptgpLAYLPLPGDNATfvwsihselakkllglpepvfvkllnAAFILDQVDLDYLLKMDVSKPDNLE 312
                    9976.66777776555467776665577777884444433333335788888888889999***99999985566666567788888888766666 PP

                    CCCHHHHHHHHHHHHHHTTSSCEE.EEEEEEEEEEEEEEESSSEETTEEE-GGGTEEE-STTSHHHHHHHHHHHHHHHHHHHHHT CS
  FAD_binding_3 240 sekfteeevkarlreivgektldv.eieevsawtvaqrvaekyrkgrvflaGDAaHihpPtgGqGlNtaiqDavnLawkLaavlk 323
                    ++   + e k r  ++  +++++   ++   +++++   +e+y k++v l GDAaH + P +GqG+Nt+iqDa  L  +L  +++
     EPX74305.1 313 KQLDWRIETKGRCLSSDRPPQVTEiVPNTRASFPLRMAHVEEYVKENVALCGDAAHNTHPLAGQGMNTGIQDAEALTNALSYAIQ 397
                    66666668899999999999988878899999***********************************************998876 PP

>> Lycopene_cycl  Lycopene cyclase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   0.0   0.00027      0.59       1      33 [.      30      64 ..      30      73 .. 0.78
   2 ?   -2.4   0.0      0.83   1.9e+03     231     250 ..     169     188 ..     165     209 .. 0.71
   3 !    7.2   0.0     0.001       2.3     231     296 ..     333     398 ..     306     431 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00027
  Lycopene_cycl  1 DvvviGaGpAglslAarltea..kpglkvvlieas 33
                   D+ ++G Gp gl+lAa l  +     lkv +++  
     EPX74305.1 30 DITIVGTGPVGLALAAGLQTNpyTRSLKVAILDNQ 64
                   99**************9944411457888888765 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.83
  Lycopene_cycl 231 kvkevveeEqgviPvtlggs 250
                    +++e+ ++E+  iP +    
     EPX74305.1 169 NIEEITRDEHTNIPCIHTST 188
                    7899**********965443 PP

  == domain 3  score: 7.2 bits;  conditional E-value: 0.001
  Lycopene_cycl 231 kvkevveeEqgviPvtlggslprleqkvlaiGaaaglvhPaTGYsvarslaeapllasaiaaalre 296
                    +v e+v + ++  P+  +   + ++++v+  G aa  +hP  G  +   ++ a+ l++a++ a ++
     EPX74305.1 333 QVTEIVPNTRASFPLRMAHVEEYVKENVALCGDAAHNTHPLAGQGMNTGIQDAEALTNALSYAIQH 398
                    678899999999999999999999999*********************************988774 PP

>> SE  Squalene epoxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   2.1e-06    0.0046     125     167 ..     353     395 ..     337     457 .. 0.76

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 2.1e-06
          SE 125 sknekkGlillGDalnmRHPltggGmtvalnDivllskllkpl 167
                 ++  k+ + l GDa    HPl g Gm  +++D+  l++ l+  
  EPX74305.1 353 EEYVKENVALCGDAAHNTHPLAGQGMNTGIQDAEALTNALSYA 395
                 555678899**************************99999865 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.0     1e-05     0.023       1      29 [.      33      65 ..      33      67 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1e-05
                   EE--SHHHHHHHHHHHCC....TEEEEEE-SSS CS
  NAD_binding_8  1 IvGaGlsGlvaAylLaka....gfdvlllekrd 29
                   IvG+G  Gl++A+ L+ +     ++v +l++++
     EPX74305.1 33 IVGTGPVGLALAAGLQTNpytrSLKVAILDNQN 65
                   9***************964444779*****998 PP

>> Thi4  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   1.6e-05     0.035      13      50 ..      24      64 ..      13      96 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.6e-05
                HHHTEEEEEEE--SHHHHHHHHHHHHCT...TS-EEEEESS CS
        Thi4 13 lkyaesDvvivGaGssGLtaayylakkp...dlkvailers 50
                ++  + D+ ivG+G+ GL+ a  l ++p    lkvail+++
  EPX74305.1 24 ISKSDYDITIVGTGPVGLALAAGLQTNPytrSLKVAILDNQ 64
                5556789******************99755579****9976 PP

>> NAD_binding_9  FAD-NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   3.9e-05     0.088       2      46 ..      33      76 ..      32      94 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3.9e-05
  NAD_binding_9  2 ivGaGprGlavlerLlarakkkspleitlfdpsepgagrvwrtdq 46
                   ivG Gp Gla+++ L  +   +++l++ + d++++++ + w+++ 
     EPX74305.1 33 IVGTGPVGLALAAGLQTNP-YTRSLKVAILDNQNTMKIQDWNPTS 76
                   9*****************6.99**********9998889998885 PP

>> K_oxygenase  L-lysine 6-monooxygenase (NADPH-requiring)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   3.8e-05     0.084       3      39 ..      29      67 ..      27      80 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 3.8e-05
  K_oxygenase  3 lDligiGiGpsnLsLailleevk..kelkalflerqpef 39
                 +D+ ++G Gp  L+La+ l+ ++  + lk+  l++q+++
   EPX74305.1 29 YDITIVGTGPVGLALAAGLQTNPytRSLKVAILDNQNTM 67
                 8*******************99998999******99875 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0   0.00018      0.41       1      42 [.      29      74 ..      29     135 .. 0.76
   2 ?   -3.7   0.0       2.4   5.3e+03     192     237 ..     156     203 ..     154     206 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00018
                 CSEEEE--SHHHHHHHHHHHH....HTS-EEEEETTHCHHHCSHHH CS
                 xxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2  1 kdvvviGgGpAGlaaaltlaq....agakvtlvelegtclnggcll 42
                 +d+ ++G Gp Gla+a  l++     ++kv++++ ++t+  ++  +
   EPX74305.1 29 YDITIVGTGPVGLALAAGLQTnpytRSLKVAILDNQNTMKIQDWNP 74
                 6899*****************887779******8877777666555 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 2.4
                  HHHHTTEEEEESCEEEEEEETTE.EEE.EEETTSCEEEESEEEE-S-E CS
                  xxxxxxxxxxxxxxxxxxxxxxx.xxx.xxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 192 alekeGvevklgtsvkeidgnge.kle.vvledgeeidadlvvvavGv 237
                   l++++ ++ + ++++ei+++++ ++   ++++   + ++l+v a G+
   EPX74305.1 156 DLHQDKFDFLVPCNIEEITRDEHtNIPcIHTSTHGILRTRLLVGADGR 203
                  577777888999999999999984444666666666778777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (469 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       326  (0.0181828); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 3275.97
//
Query:       EPX74306.1  [L=193]
Description: meiotically upregulated Mug57 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.4e-07   31.0   0.0    3.7e-07   30.4   0.0    1.3  1  Fasciclin  Fasciclin domain


Domain annotation for each model (and alignments):
>> Fasciclin  Fasciclin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   0.0     2e-11   3.7e-07       2     126 ..      51     184 ..      50     187 .. 0.79

  Alignments for each domain:
  == domain 1  score: 30.4 bits;  conditional E-value: 2e-11
                 GGHHHHHHHHTT.TCCCCCTCSSSSEEEEEE-HHHHCCC..HHHHHHHHHT...........CHHHHHHHHHTTEEESSS-HHHHHHHHEEEECCTTSS CS
   Fasciclin   2 dlstfvslleka.glaeeLnkkdgglTvFaPtneAfakl..ppellaklln...........dkkklkeiLkyHvvpetvsssalkkasetlatllega 86 
                 d++ f+++l +  +l+e L++++++ T+++Pt+ Af+++  +p +l++l++           ++++++  L+ ++ +  +s+s  + + +++++ l+g+
  EPX74306.1  51 DCNIFSDILMQFpELVERLQSSNENTTLLVPTDLAFQNMkvKPWKLDTLEAkfempsepvhiTEDQAQGNLHRFIKSHFISASPSHGN-GEYKS-LSGS 147
                 57789998888889******999*************9998855566666556667778888877777777777666655555555555.99***.**** PP

                 EEEEEEEGGTTEEEETTEEEEEEEEEEESSEEEEEESS-T CS
   Fasciclin  87 klrvniekgngtvtvngkarvvrsdieatngvihvidkvL 126
                 +++v ++  +++++++++++v+ s + a+ng + ++++ L
  EPX74306.1 148 TINVIKQ--KDNLYLDDSVQVL-SIKLASNGEMWILNNTL 184
                 *******..999****988888.77788998888887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       499  (0.027832); expected 358.6 (0.02)
Passed bias filter:                      407  (0.0227007); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.21s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1575.67
//
Query:       EPX74307.1  [L=267]
Description: meiotically upregulated Mug97 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (267 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       790  (0.0440627); expected 358.6 (0.02)
Passed bias filter:                      474  (0.0264376); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 1978.93
//
Query:       EPX74308.1  [L=1010]
Description: histone demethylase SWIRM1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.1e-46  157.6   0.0    1.2e-45  156.7   0.0    1.5  1  Amino_oxidase  Flavin containing amine oxidoreductase
    4.3e-14   52.6   0.1    3.4e-13   49.7   0.0    2.6  2  SWIRM          SWIRM domain
    3.4e-05   24.0   0.0    9.4e-05   22.6   0.0    1.8  1  NAD_binding_8  NAD(P)-binding Rossmann-like domain
    5.6e-05   23.5   0.2    0.00013   22.3   0.2    1.7  1  HMG_box        HMG (high mobility group) box
     0.0015   17.9   0.0      0.014   14.6   0.0    2.2  2  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
      0.003   17.2   0.4      0.012   15.2   0.0    2.2  3  DAO            FAD dependent oxidoreductase
     0.0045   17.0   0.0       0.61   10.1   0.0    2.5  2  NAD_binding_9  FAD-NAD(P)-binding
  ------ inclusion threshold ------
      0.029   14.9   0.7       0.11   13.1   0.3    2.2  2  HMG_box_2      HMG-box domain
      0.072   12.3   0.2        3.4    6.9   0.0    2.4  2  Pyr_redox_3    Pyridine nucleotide-disulphide oxidoreductase


Domain annotation for each model (and alignments):
>> Amino_oxidase  Flavin containing amine oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.7   0.0     6e-49   1.2e-45       1     452 []     282     765 ..     282     765 .. 0.80

  Alignments for each domain:
  == domain 1  score: 156.7 bits;  conditional E-value: 6e-49
                    HHHHHHHHHH...........HHTT...EEEEEEESSSSSBTTS-EEEET...........T........EEEESS--EEET.....TTHHHHHHH CS
  Amino_oxidase   1 laGLaaArqL...........lsaG...fdVtvlEardrvGGRirtvrsd...........G........ylielGamwftg.....agnpllell 58 
                    +aG ++ArqL           +++G   ++++v+Ea++r+GG++++++ +           G         +++l ++++ g     +++ +  + 
     EPX74308.1 282 MAGVSCARQLanlfaqyeqdfTTRGeqpPQLIVYEASSRLGGHVFSHEISlieslseeeqvGlqmdipqaCTVNLSSDFLYGfpfleNDPLHIIVS 377
                    8********************9999999************************98866666635566666688888888888888874444455555 PP

                    HHTTCCCCEEEESCCGCEEEEETTEECCTTEECHHHHHHHHHHHHHHHH..CHHHHHHHHHHHHHHHHH..HHHCCCCHHHHHHHHHCHHHHHHHH CS
  Amino_oxidase  59 kelgledslslpdpgapkrvlskggrefpgdlspvpaewealleqgals..aellsleeklrlgleall..qktldeldldskslaesleelgrre 150
                    ++l l+++l+    +++  ++s   r+ +  + ++ +++++ll++ +    + ll++ ++ ++++   l    ++ + d    s+++sl  + +++
     EPX74308.1 378 QQLSLDEVLR--QTQNVALYDSDACRIDQRYIDRILMLFRSLLDYFFSMknDQLLNIVSSPKQKFIGALqsLDWHLVGDIFPLSTQDSLKIFLEDS 471
                    5566666655..333223333333333344444447777777774433356667777444444333333354555555555555555555555555 PP

                    HHHHHH...HHHHHHHHHHHHHHHHHHCHTSTTTTCBHHHHTCCCCHHHHHTSCCCEETTHTHHHHHHHHHTTTTEEEETSEEEEEEEEETTCEEE CS
  Amino_oxidase 151 pgdvev...wdrliepelfaklefasglfagdpselsaklalpllwelegfggslllprgGlsqlpealaeelrgldirlntrVkeikregdgvtv 243
                    + + ++   ++   +   ++ +e++  +  + p e+ +  ++++  + +g++ + + +++G+s+l+eala + ++l i++++   +++ ++ +v +
     EPX74308.1 472 FRNLNHslhFSIPETRVFEWCVEYLKQT-SYAPLESIKPTSFNSINFPFGEDVPSYAIKNGMSTLIEALATTPSPLPILFDHTIQSVDVDDQKVQL 566
                    5554444224444445566788888887.466778888889999**************************************************** PP

                    EETTSTEEEESEEEE-S-HHHHH..SSEEESCCSHHHHHHHHHSEEEEEEEEEEEESSGGSGCSTSECECECCCEEETTTEEEEECC.ECCCSTTT CS
  Amino_oxidase 244 tledgevveaDaVvvTvplgvlk..ailfsPplpdekaeairnlgfgsvnkvilefdrkfwednalgqgvlvseltttlgeafissd.fpsrappg 336
                     +++ e+v++D+Vv+++p++  +  ++ f+P  ++ k +a+ ++ + +  k+++ f ++fwe n      +   ++t++++++i++d  +++  p 
     EPX74308.1 567 SFTNEESVTVDKVVMCLPIDKYRnsTVSFRPAISENKINALNKCYMLNRKKIVFLFNKQFWELNR-----SIFGSLTSSKKNYIFNDcSDIYGLP- 656
                    *******************************99******************************98.....4555677788889999977888777. PP

                    EEEEEEEEECHHHHHHHTTS-HHHHHHHHHHHHHHHHTGTSSTCSEEEEEECCTETTT.SSSEEE.BTTHHHHHHHHHHCHHCSTTEEE.SGGGCT CS
  Amino_oxidase 337 kglvllvyvggdaaneleslsdeelvqavlrdLrklfgeevpepkatlvtrWhtdpla.rgsysyvsvgpghedydplakpegdprlffAGehtsr 431
                        l+vyv   a++++    d ++v  +l +Lr++f+ e+ +p +t++t+W  +++  ++sy + s+ ++ edy  l+++   ++++fA e+ s+
     EPX74308.1 657 ---SLSVYVDIPAHQQV---VDRDIVHDILAELRSIFKVENLQPLRTVITNWENNAFLnHSSY-TISPDSSLEDYSILRES-MGDTVYFASEALSK 744
                    ...59*****8899888...9*************************************88888.7888889**********.************** PP

                    TTTTSHHHHHHHHHHHHHHHH CS
  Amino_oxidase 432 eypgtvegAilSGlraAaril 452
                    ++pgt+ gA++SGl aA +il
     EPX74308.1 745 DHPGTLRGAFQSGLLAAKDIL 765
                    ******************997 PP

>> SWIRM  SWIRM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.7   0.0   1.7e-16   3.4e-13       6      89 .]     177     255 ..     171     255 .. 0.93
   2 ?   -1.6   0.1       1.8   3.7e+03      28      49 ..     606     627 ..     593     649 .. 0.75

  Alignments for each domain:
  == domain 1  score: 49.7 bits;  conditional E-value: 1.7e-16
       SWIRM   6 FdpdslhpiEkellselfngkdktpeeYlkiRnkiialyrenpkeyltvteaqkalkrrrltgidvnllsrihefLerwGlINf 89 
                 ++p+sl+++E+ellse++++  +    YlkiRn i+ l+++np+  ++++ea   ++    ++  + l+s ++efL+r+G+IN+
  EPX74308.1 177 LSPNSLSDEEVELLSEILDN-PNWLSLYLKIRNGICYLWHRNPTLFVSFNEALGIVR----DKMAFPLASLAFEFLTRNGYINY 255
                 789***************65.59*****************************99998....55699*****************8 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.8
       SWIRM  28 ktpeeYlkiRnkiialyrenpk 49 
                 +  + Y+  R+ki+ l++++  
  EPX74308.1 606 ALNKCYMLNRKKIVFLFNKQFW 627
                 5667899999999999888754 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.0   4.7e-08   9.4e-05       1      40 [.     277     330 ..     277     347 .. 0.78

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 4.7e-08
                    EE--SHHHHHHHHHHH..............CCTEEEEEE-SSSSSSGGG-EECE CS
  NAD_binding_8   1 IvGaGlsGlvaAylLa..............kagfdvlllekrdrlGGraasyev 40 
                    +vGaG++G ++A+ La              ++  +  ++e+++rlGG++ s e+
     EPX74308.1 277 VVGAGMAGVSCARQLAnlfaqyeqdfttrgEQPPQLIVYEASSRLGGHVFSHEI 330
                    8***************6665554444332223449**************99876 PP

>> HMG_box  HMG (high mobility group) box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.2   6.7e-08   0.00013      23      68 ..     881     928 ..     870     929 .. 0.84

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 6.7e-08
                 STTS-..HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     HMG_box  23 nPelk..naeiskklgekWkalseeeKkkYeekaekekaryekekpey 68 
                 +Pe +   +ei  klg++W+al +  K+++ ++  + +a y +  +ey
  EPX74308.1 881 DPEVRatKNEIRAKLGKTWRALDDLGKQPWVDEVTARRANYSSRLEEY 928
                 555554479**********************************99999 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   7.1e-06     0.014     143     166 ..     273     296 ..     248     348 .. 0.62
   2 ?    0.2   0.0      0.18   3.6e+02     201     234 ..     549     582 ..     527     587 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 7.1e-06
                  SEEEEES-SHHHHHHHHHHHHHT- CS
                  xxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 143 krivvvGgGyiGvElAaalaklgk 166
                  k i+vvG+G+ Gv +A +la+l +
   EPX74308.1 273 KTIAVVGAGMAGVSCARQLANLFA 296
                  555666666666666666555422 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.18
                  EESCEEEEEEETTEEEEEEETTSCEEEESEEEE- CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 201 klgtsvkeidgngeklevvledgeeidadlvvva 234
                   + ++++ +d +++k+++  +++e++ +d vv++
   EPX74308.1 549 LFDHTIQSVDVDDQKVQLSFTNEESVTVDKVVMC 582
                  5556667777777777777777777777777776 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       2.7   5.3e+03     143     181 ..      93     131 ..      30     144 .. 0.67
   2 !   15.2   0.0   5.9e-06     0.012       2      39 ..     275     328 ..     274     357 .. 0.73
   3 ?   -2.5   0.1       1.5     3e+03      25      80 ..     779     834 ..     765     961 .. 0.56

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 2.7
                 EEHHHHHHHHHHH.HHHTT-EEEESECEEEEEEEETCEEE CS
         DAO 143 vdpakltaalara.aealGveilegtevtgleeedgkvwg 181
                  ++  l + ++++ a+++G +   +  v g++ ++++v+ 
  EPX74308.1  93 QEASMLNQHMLNTeAAQKGLDAKGRQSVNGIR-KGKRVSA 131
                 45566666666666899999999999999994.3444433 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 5.9e-06
                 EEEECTSHHHHHHHHHH...........HHTT.....EEEEESSSSTTSSGGGS CS
         DAO   2 vviiGGGiiGlstAyeL...........arrg.....VtllekgdiagsgaSgr 39 
                 ++++G+G++G+s+A++L           ++rg      +++e+++++g +  ++
  EPX74308.1 275 IAVVGAGMAGVSCARQLanlfaqyeqdfTTRGeqppqLIVYEASSRLGGHVFSH 328
                 89***************5555444433333556667888888887777665555 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 1.5
                 EEESSSSTTSSGGGSSEEEEESSSSTHHSTHHHH.HHHHHHHHHH.HHHHHHHSSTTS CS
         DAO  25 llekgdiagsgaSgrnsgllhsglrylpeasela.rlslealeel.releeelgidid 80 
                 ++e + + ++ +  r++g+ +   r + +  ++a   +++ l+++ ++le+e + +++
  EPX74308.1 779 IVEEKLEGSESSRKRSAGQTYDTRR-KDNDDDKAlSYYHDYLRLRkQRLEKE-EQECE 834
                 5555544444444555555555544.33222222144444445554444444.33333 PP

>> NAD_binding_9  FAD-NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.0   0.00031      0.61       1      45 [.     276     329 ..     276     336 .. 0.83
   2 ?    4.1   0.0     0.022        43     122     153 ..     552     583 ..     536     584 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00031
  NAD_binding_9   1 aivGaGprGlavlerLlara.........kkkspleitlfdpsep.gagrvwrtd 45 
                    a+vGaG++G++++++L++           + ++p ++ +++ s+  g g+v++ +
     EPX74308.1 276 AVVGAGMAGVSCARQLANLFaqyeqdfttRGEQPPQLIVYEASSRlG-GHVFSHE 329
                    89*************99887777887777777889999999966637.9988765 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.022
  NAD_binding_9 122 aevvdleeradgqavlladgaslaadaVvLAl 153
                    +++ +++ +++++++  ++++s+++d+Vv++l
     EPX74308.1 552 HTIQSVDVDDQKVQLSFTNEESVTVDKVVMCL 583
                    56777888888899999*************97 PP

>> HMG_box_2  HMG-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.3   5.5e-05      0.11       3      69 ..     850     925 ..     848     929 .. 0.83
   2 ?   -1.7   0.0       2.3   4.5e+03       5      27 ..     929     950 ..     926     967 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 5.5e-05
                 -.-SS--HHHHHHHTTHHHHHHH.........T--..-SSHHHHTGGGHHHHHHS-HHHHHHHHHHHHHHHHHHHH-S CS
   HMG_box_2   3 kpkaarnAYalfvqemipelkrk.........Gnp..viglaevsklcsekWkalseeeKekYeekAkedkkrydrea 69 
                 +p a  n Y+++ ++++   ++          G p  ++  +e+  ++++ W+al +  K+++ ++  + +++y++  
  EPX74308.1 850 RPSA--NPYLIYQKTQWHVCRALadqekqrstGDPevRATKNEIRAKLGKTWRALDDLGKQPWVDEVTARRANYSSRL 925
                 5544..88999999988877766666777788999888899******************************9999765 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 2.3
                 -SS--HHHHHHHTTHHHHHHHT- CS
   HMG_box_2   5 kaarnAYalfvqemipelkrkGn 27 
                 +++ n+Y++ + + ++e+ rk  
  EPX74308.1 929 QRQINGYNVRAAQIRDEHLRK-C 950
                 678899999999999999888.3 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.1     0.027        54       2      18 ..     277     293 ..     276     298 .. 0.87
   2 ?    6.9   0.0    0.0017       3.4     205     263 ..     523     581 ..     516     610 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.027
  Pyr_redox_3   2 IiGaGPaGlaaaielkk 18 
                  ++GaG aG+++a +l +
   EPX74308.1 277 VVGAGMAGVSCARQLAN 293
                  8***********99876 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0017
  Pyr_redox_3 205 dpsyslkpdienrleelvke.ekikvlfnaevkeikekeeeykvktedgkkvevkddvvl 263
                   psy +k  +   +e+l ++ + + +lf++++++++ ++++++++++++++v+v++ vv+
   EPX74308.1 523 VPSYAIKNGMSTLIEALATTpSPLPILFDHTIQSVDVDDQKVQLSFTNEESVTVDK-VVM 581
                  589999999999999999888779************************99999955.454 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1010 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       744  (0.041497); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        67  (0.00373696); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.80u 0.26s 00:00:01.06 Elapsed: 00:00:00.42
# Mc/sec: 7186.55
//
Query:       EPX74309.1  [L=125]
Description: translation initiation factor eIF1A-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-18   66.4   0.0    1.8e-18   66.1   0.0    1.1  1  eIF-1a    Translation initiation factor 1A / IF-1
     0.0094   16.6   0.0      0.012   16.3   0.0    1.2  1  HlyD_3    HlyD family secretion protein
  ------ inclusion threshold ------
      0.073   13.2   0.0      0.094   12.8   0.0    1.3  1  DUF3567   Protein of unknown function (DUF3567)


Domain annotation for each model (and alignments):
>> eIF-1a  Translation initiation factor 1A / IF-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.1   0.0     3e-22   1.8e-18       1      63 [.      20      85 ..      20      86 .. 0.96

  Alignments for each domain:
  == domain 1  score: 66.1 bits;  conditional E-value: 3e-22
                EEEEEEEEEEETTTEEEEEE.SSSSBEEEEE-HHHHCT----TT-EEEEEE-TT-TT....EEEEES CS
      eIF-1a  1 gevigkViealgnnlfrVelpdngkevlaeipgkfRnkiwikrGdyVlVelspydlt....kGrIvy 63
                ++v ++V++++g++lf+V  p ngke+l+e+p+k R+k wikrG+yV+V+ s++ ++     G Ivy
  EPX74309.1 20 DQVVARVLQLRGSALFTVCEP-NGKELLVEMPAKYRSKAWIKRGGYVVVDKSEFTDQqnkiDGSIVY 85
                69******************9.9*******************************8889999999998 PP

>> HlyD_3  HlyD family secretion protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0     2e-06     0.012      14      82 ..      20      92 ..      16     112 .. 0.83

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 2e-06
      HlyD_3 14 nveegevvq.agdelleiippd..tllveakvpaadlgsikkkgqkvtlkldqgsdy..tlkgkierisptvda 82
                +  + +v+q +g +l++++ p+  +llve    ++  ++ik  g  v ++ + ++d+  +++g i+++ + + +
  EPX74309.1 20 DQVVARVLQlRGSALFTVCEPNgkELLVEMPAKYRSKAWIK-RGGYVVVDKSEFTDQqnKIDGSIVYVVQHPLK 92
                55677888889*********954499999999999999995.********997777777*********998855 PP

>> DUF3567  Protein of unknown function (DUF3567)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   1.6e-05     0.094      18      66 ..      52      99 ..      30     119 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.6e-05
     DUF3567 18 daeeealaeka..argGyEivDKr..akkeiyldGslAesfrkevkalieeep 66
                + +++     a  +rgGy +vDK+  + ++  +dGs+    ++ +k++ +++ 
  EPX74309.1 52 KYRSK-----AwiKRGGYVVVDKSefTDQQNKIDGSIVYVVQHPLKNWEKQSY 99
                22222.....1459*********733567778****************98864 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       526  (0.0293379); expected 358.6 (0.02)
Passed bias filter:                      378  (0.0210832); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.37u 0.23s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 988.29
//
Query:       EPX74310.1  [L=518]
Description: U2AF large subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      2e-27   94.8   2.4    6.9e-19   67.5   0.3    3.2  3  RRM_1         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
     0.0071   16.4   0.0      0.026   14.6   0.0    2.0  2  RNA_bind      RNA binding domain
  ------ inclusion threshold ------
      0.024   14.5   0.0       0.53   10.2   0.0    2.4  2  RRM_occluded  Occluded RNA-recognition motif
      0.031   14.3   0.1         24    4.9   0.0    3.3  3  Smg4_UPF3     Smg-4/UPF3 family


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.28   1.3e+03       1      16 [.     201     216 ..     201     222 .. 0.76
   2 !   67.5   0.3   1.5e-22   6.9e-19       1      69 [.     312     381 ..     312     382 .. 0.97
   3 !   25.4   0.0     2e-09   9.2e-06      19      69 ..     448     503 ..     441     504 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.28
                 EEEESETTTSSHHHHH CS
       RRM_1   1 lfVgnLppdvteeeLk 16 
                 l+V+nLp+d + ++ k
  EPX74310.1 201 LVVSNLPSDFDINTFK 216
                 78******98766665 PP

  == domain 2  score: 67.5 bits;  conditional E-value: 1.5e-22
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrel 69 
                 ++ +n+p++++e+++ elF++fG+  s++l++d ++++s+gf+f+e+ ++e+ ekA+++l+g++++++++
  EPX74310.1 312 VYFTNFPSNLSEQNVIELFKPFGELLSFQLIKDvADNSSRGFGFCEYRNPENTEKAIQNLDGMEFNDKKI 381
                 5779****************************************************************98 PP

  == domain 3  score: 25.4 bits;  conditional E-value: 2e-09
                 HHTTSCEEEEEEEEE...TTTSEEEEE..EEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1  19 FskfGpiksiklvrd...etgkskgfa..fVeFeskedAekAlealngkklggrel 69 
                 +s++G++ +ik++ +   ++ +s g++  +V+F++ e+A  A++++ g+k+++r++
  EPX74310.1 448 LSQYGKVLDIKIPQQkgfSDTPSLGIGkvYVRFADIESAVTAMQEMRGYKFDDRTI 503
                 79************99988888888876689***********************98 PP

>> RNA_bind  RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   5.8e-06     0.026       4      35 ..     305     336 ..     302     375 .. 0.84
   2 ?   -3.2   0.0       2.1   9.2e+03      33      50 ..     474     491 ..     471     495 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 5.8e-06
                 XXXXXEEEEEEE--TT--HHHHHHHTTTSEEE CS
    RNA_bind   4 pepsReHvfyvtFPkeWktsDivqlFspfGsv 35 
                    s++ v++  FP++  ++++++lF+pfG+ 
  EPX74310.1 305 VLDSKNKVYFTNFPSNLSEQNVIELFKPFGEL 336
                 567899************************85 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 2.1
                 EEEEEEEEETTEEEEEEE CS
    RNA_bind  33 GsvyvsWlddtsAfvaLh 50 
                 G+vyv + d  sA  a++
  EPX74310.1 474 GKVYVRFADIESAVTAMQ 491
                 899999999888877765 PP

>> RRM_occluded  Occluded RNA-recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   0.00012      0.53       8      71 ..     316     384 ..     310     388 .. 0.79
   2 ?    1.4   0.0     0.066   2.9e+02      43      68 ..     478     503 ..     476     506 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00012
  RRM_occluded   8 plsDtvnkariralveek....e.geikkivLvpdheGAivefkdekiagkasLaLdgsefegkklrcG 71 
                   +++ + +++++ +l+++     + + ik++   ++ +  + e+++ + + ka+  Ldg+ef++kk+++G
    EPX74310.1 316 NFPSNLSEQNVIELFKPFgellSfQLIKDVADNSSRGFGFCEYRNPENTEKAIQNLDGMEFNDKKISVG 384
                   5566666777777777776555336677777777777788999************************99 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.066
  RRM_occluded  43 vefkdekiagkasLaLdgsefegkkl 68 
                   v f+d ++a  a+ ++ g++f+++++
    EPX74310.1 478 VRFADIESAVTAMQEMRGYKFDDRTI 503
                   8899********************98 PP

>> Smg4_UPF3  Smg-4/UPF3 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0       0.1   4.6e+02       4      41 ..     199     244 ..     196     255 .. 0.83
   2 ?    4.9   0.0    0.0053        24       3     102 ..     309     398 ..     307     417 .. 0.76
   3 ?    4.3   0.0    0.0083        37      55      81 ..     475     501 ..     461     504 .. 0.93

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.1
   Smg4_UPF3   4 tKvviRrLPPnLteeefleavsd........kplpetvdykyFvpG 41 
                  ++v+  LP +   ++f + ++d        kp +++++  yF++ 
  EPX74310.1 199 RRLVVSNLPSDFDINTFKSFIEDlfisttyhKPETSHFSNAYFCKE 244
                 6899999******999999999777777777888888888888875 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.0053
   Smg4_UPF3   3 ktKvviRrLPPnLteeefleavsdkplpetvdykyFvpGklskdslkeskysrayinfkdpedlvqfakkfdghvFvDskgnespaivefApyqkvpkk 101
                 k Kv     P nL+e++++e  +  p+    +  +F   k   d  ++s+      + ++pe+  +  +++dg+ F D+k   s+    + + qk+p++
  EPX74310.1 309 KNKVYFTNFPSNLSEQNVIELFK--PFG---ELLSFQLIK---DVADNSSRGFGFCEYRNPENTEKAIQNLDGMEFNDKK--ISVGFSCVGLNQKIPES 397
                 67888888999999999999999..666...566666666...77888888888889999******************99..77777777777777664 PP

   Smg4_UPF3 102 k 102
                 +
  EPX74310.1 398 N 398
                 4 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.0083
   Smg4_UPF3  55 rayinfkdpedlvqfakkfdghvFvDs 81 
                  +y++f d e+ v+  ++++g++F D 
  EPX74310.1 475 KVYVRFADIESAVTAMQEMRGYKFDDR 501
                 68**********************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (518 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       848  (0.0472977); expected 358.6 (0.02)
Passed bias filter:                      514  (0.0286686); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.55u 0.31s 00:00:00.86 Elapsed: 00:00:00.44
# Mc/sec: 3537.74
//
Query:       EPX74311.1  [L=693]
Description: VRR-NUC nuclease associated domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-23   82.2   0.0    5.2e-23   81.2   0.0    1.5  1  VRR_NUC   VRR-NUC domain


Domain annotation for each model (and alignments):
>> VRR_NUC  VRR-NUC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.2   0.0   2.9e-27   5.2e-23      11     106 ..     585     684 ..     576     686 .. 0.90

  Alignments for each domain:
  == domain 1  score: 81.2 bits;  conditional E-value: 2.9e-27
                 HHHHHHTTCBBTTB-TTTSS.......HHCHHHHHHHHHHHHHHCHHHHSSTS-SEEEEETTTTE..EEEEEEE-TT----HHHHHHHHHHHHTT-EEE CS
     VRR_NUC  11 adkleklgllapvvnwgels.......qcepkealaklfralledyrglrsGvPDLilwieeqkryvflliEvKgpgdrlsdnQrkwldelarsgvrve 102
                  ++ e ++ ++ +++w+ ++       +c+p++ la++f a+++dy++ +sG+PDL+lw+ e+k+  fll EvK+  drls+ Q+ w+d l +   +ve
  EPX74311.1 585 TRESENQP-VCIGLQWSYSLemllsvtHCIPGKGLASIFHAMAQDYKNASSGMPDLCLWNAEKKT--FLLSEVKSDSDRLSEPQKFWIDLLLSASLPVE 680
                 44444444.8999999997799999***************************************8..******************************** PP

                 EEEE CS
     VRR_NUC 103 vcrv 106
                 vc+v
  EPX74311.1 681 VCHV 684
                 ***8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (693 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       478  (0.0266607); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 4804.49
//
Query:       EPX74312.1  [L=363]
Description: complexed with Cdc5 protein Cwf25 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.1e-20   73.0   3.9    3.1e-20   73.0   3.9    3.1  4  CWC25     Pre-mRNA splicing factor
    3.1e-14   52.8  12.2    3.1e-14   52.8  12.2    4.2  3  Cir_N     N-terminal domain of CBF1 interacting co-repressor 
  ------ inclusion threshold ------
          3    8.1   5.2         25    5.1   0.3    2.7  2  ROF       Modulator of Rho-dependent transcription terminatio


Domain annotation for each model (and alignments):
>> CWC25  Pre-mRNA splicing factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.1       1.8   1.1e+04      61      61 ..      33      33 ..       9      60 .. 0.54
   2 !   73.0   3.9   5.1e-24   3.1e-20       2     100 ..      66     155 ..      65     158 .. 0.80
   3 ?   -2.8   0.1       2.1   1.2e+04      25      25 ..     214     214 ..     185     256 .. 0.54
   4 ?    2.6   1.0     0.044   2.6e+02      26      55 ..     293     324 ..     265     348 .. 0.54

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.8
       CWC25 61 g 61
                +
  EPX74312.1 33 E 33
                1 PP

  == domain 2  score: 73.0 bits;  conditional E-value: 5.1e-24
       CWC25   2 aerleWMYegpke..agaaeeeneeyllGKkrvdkllegkdkaekkkkakaskaesaaeqggaarlekvansardtanklreDPllaIkkqeqealkal 98 
                 ++r+eWMY+ p++  a+ +++e+eeyllGK+r d+ll++k +++k++ +          +++   l++ ans +dt++k+r DPllaIk+qeq++++ l
  EPX74312.1  66 KDRVEWMYAVPTAegAKRDASEMEEYLLGKRRLDDLLSDKVEDQKNSLN----------KTEFISLQN-ANSVQDTQSKIRLDPLLAIKQQEQKQMQIL 153
                 79*******9944456679999*****************7766555532..........222333455.589***********************9987 PP

       CWC25  99 lk 100
                  +
  EPX74312.1 154 AE 155
                 65 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 2.1
       CWC25  25 y 25 
                 y
  EPX74312.1 214 Y 214
                 2 PP

  == domain 4  score: 2.6 bits;  conditional E-value: 0.044
       CWC25  26 llGKkrvdkl..legkdkaekkkkakaskaes 55 
                  l+ +rv+kl  le+++ +e++k+++++++++
  EPX74312.1 293 SLEQNRVEKLrkLEQEERTETAKNEEERSSTA 324
                 34445566663333333322222222222222 PP

>> Cir_N  N-terminal domain of CBF1 interacting co-repressor CIR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.8  12.2   5.2e-18   3.1e-14       1      37 []      11      47 ..      11      47 .. 0.99
   2 ?   -5.6   7.1         3   1.8e+04      20      24 ..     152     156 ..     142     168 .. 0.49
   3 ?   -2.2   6.1      0.86   5.1e+03      11      29 ..     300     318 ..     295     326 .. 0.79

  Alignments for each domain:
  == domain 1  score: 52.8 bits;  conditional E-value: 5.2e-18
                SS-TTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       Cir_N  1 SWHPgllkNqerVWkaEqkaleEkkkieerkkeieeE 37
                SWHP l++NqerVWk+Eq ++eE k+ e++++eieeE
  EPX74312.1 11 SWHPLLMRNQERVWKEEQTHKEELKRVEQLRREIEEE 47
                9***********************************9 PP

  == domain 2  score: -5.6 bits;  conditional E-value: 3
                 HHHHH CS
       Cir_N  20 aleEk 24 
                  l+Ek
  EPX74312.1 152 ILAEK 156
                 23333 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 0.86
                 HHHHHHHHHHHHHHHHHHH CS
       Cir_N  11 erVWkaEqkaleEkkkiee 29 
                 e+ +k Eq++  E  k ee
  EPX74312.1 300 EKLRKLEQEERTETAKNEE 318
                 8999999999988766554 PP

>> ROF  Modulator of Rho-dependent transcription termination (ROF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.6    0.0091        55      24      65 ..      17      58 ..      10      64 .. 0.80
   2 ?    5.1   0.3    0.0041        25      38      71 ..     110     147 ..      99     152 .. 0.73

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.0091
                -TTT--EEESS-EEE--S.SS-EEEEEETTEEEEESTT--SE CS
         ROF 24 LkdgetiegkakdtltrkekeEyLvvetegeeqelrldeils 65
                ++++e++  + ++   + +++E L  e e+e+q l+l+++++
  EPX74312.1 17 MRNQERVWKEEQTHKEELKRVEQLRREIEEERQLLELQRLQE 58
                56666666555555666699******************9975 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.0041
                 E--S.SS-EEEEEET....TEEEEESTT--SEEE.... CS
         ROF  38 ltrkekeEyLvvete....geeqelrldeilslsvlte 71 
                   + +k E++ ++++    +++ ++rld +l+++ +++
  EPX74312.1 110 KNSLNKTEFISLQNAnsvqDTQSKIRLDPLLAIKQQEQ 147
                 4455899***99987333256779*********96655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (363 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2185  (0.12187); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.28s 00:00:00.90 Elapsed: 00:00:00.46
# Mc/sec: 2374.21
//
Query:       EPX74313.1  [L=196]
Description: sulfhydryl oxidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-10   41.8   0.0      2e-10   41.0   0.0    1.4  1  Evr1_Alr  Erv1 / Alr family
  ------ inclusion threshold ------
      0.027   14.3   0.2      0.045   13.6   0.2    1.3  1  AbiGi     Putative abortive phage resistance protein AbiGi, a


Domain annotation for each model (and alignments):
>> Evr1_Alr  Erv1 / Alr family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.0   0.0   2.2e-14     2e-10       3      84 ..      74     150 ..      72     163 .. 0.90

  Alignments for each domain:
  == domain 1  score: 41.0 bits;  conditional E-value: 2.2e-14
                 HHHHHHHHHHCSHSS..HHHHHHH-CHHHHHHHHHHHSSCHHHHHHHHHHHHHCH.CCCGSSHHHHHHHHHHHHHHHHHHTT CS
    Evr1_Alr   3 lWtllHtlaaevpekpteeqqkelavlkaflkliakfypCeeCaehfekvlaenppekevesrdelvlWlweaHNeVnkrla 84 
                  Wt lHt+ a++p+ pt +++++l    +++ + a+++pC +C+   +k+++++pp+  + sr+++ +W +++H + n++ +
  EPX74313.1  74 YWTSLHTTLANYPSLPTLHERNTL---YHYVISSASLFPCGDCSIVSQKLMRKYPPQ--IGSRKSALTWGCKIHRKFNEEFN 150
                 6************99***999998...888888999*******************88..*******************9877 PP

>> AbiGi  Putative abortive phage resistance protein AbiGi, antitoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.2     5e-06     0.045     109     168 ..      14      74 ..       6      82 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 5e-06
       AbiGi 109 fliyiktfdksenksfylerEWR.lvpnllsilgekvteeevtkkkfedkentkleafkFk 168
                 + + i  f   +++s+  ++EWR ++p+l++i++++ +e+ v+   ++ k++tk e  k+ 
  EPX74313.1  14 STVIIMVFVIWVFDSVMIDKEWRlYMPELKEIGKKEKSENVVAMTPLNYKDDTKKEIMKYY 74 
                 555566677778999********5589***************************9999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       868  (0.0484132); expected 358.6 (0.02)
Passed bias filter:                      604  (0.0336884); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.29s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 1360.79
//
Query:       EPX74314.1  [L=1338]
Description: condensin complex subunit Cut3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      8e-66  221.6  52.2    9.5e-37  126.6   7.3    3.9  2  SMC_N           RecF/RecN/SMC N terminal domain
    3.9e-25   88.4   1.4    1.2e-24   86.8   0.0    2.7  2  SMC_hinge       SMC proteins Flexible Hinge Domain
    8.5e-11   42.2  21.7    6.2e-07   29.5   0.9    5.2  4  AAA_21          AAA domain, putative AbiEii toxin, Type IV TA
    6.1e-06   26.2  22.7    6.1e-06   26.2  22.7    6.7  6  KASH_CCD        Coiled-coil region of CCDC155 or KASH
    7.5e-05   22.4   0.0    0.00015   21.5   0.0    1.5  1  AAA_29          P-loop containing region of AAA domain
     0.0033   16.4  15.8     0.0033   16.4  15.8    7.2  8  Spc7            Spc7 kinetochore protein
     0.0099   15.9   8.9     0.0099   15.9   8.9    6.9  7  CENP-F_leu_zip  Leucine-rich repeats of kinetochore protein C
  ------ inclusion threshold ------
       0.49   10.9   0.0       0.49   10.9   0.0    7.2  4  ABC_tran        ABC transporter
         10    5.4   9.4        0.7    9.2   0.6    3.2  3  CcmH            Cytochrome C biogenesis protein


Domain annotation for each model (and alignments):
>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.6   7.3   4.8e-40   9.5e-37       2     135 ..     127     260 ..     126     488 .. 0.85
   2 !   97.8  36.9     3e-31   5.9e-28      65     219 ..     531    1313 ..     516    1314 .. 0.96

  Alignments for each domain:
  == domain 1  score: 126.6 bits;  conditional E-value: 4.8e-40
                 EEEEEEESETTEECEEEEEETTSSEEEEEESTTSSHHHHHHHHHHHCTT.TTTTTTCHCCCCCC--BTTCSSTTEEEEEEEEEETTEE.SSSSSSCEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxx RF
       SMC_N   2 lkrleienFksyagktvilpfsksftaivGpNGSGKsnlldAilFvLGersakklrseklsdlihkskekasvkkaeveitfdnedkk.lkiekeevsi 99 
                 + +l+++nFksyag+++i+pf++sf++ivGpNGSGKsn++dA+lFv+G+r++ klr++k+s+lihks++++s+++++vei+f++ + + + ie +e+si
  EPX74314.1 127 VYQLTLKNFKSYAGTQIIGPFHPSFSSIVGPNGSGKSNVIDALLFVFGFRAS-KLRQTKASALIHKSAAHPSLESCDVEILFKEVNPDsSYIEGSELSI 224
                 6799*********************************************988.*****************************9877665799******* PP

                 EEEEETTSEEEEEETTEEE-HHHHHHHHHCTT-STT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 100 srrvkrkgeseykingkevtkkevsellesagiske 135
                 +r++++++ s+y++n+ e +++ +s++l++ g++ +
  EPX74314.1 225 RRSAYKNNVSKYFLNNVESSFSTISNMLKERGVDLN 260
                 ******************************998866 PP

  == domain 2  score: 97.8 bits;  conditional E-value: 3e-31
                  C--BTTCSSTTEEEEEEEEEETTEE.SSSSSSCEEEEEEEETTSEEEEEETTEEE-HHHHHHHHHCTT-STT......................... CS
                  xxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......................... RF
       SMC_N   65 ihkskekasvkkaeveitfdnedkk.lkiekeevsisrrvkrkgeseykingkevtkkevsellesagiske......................... 135 
                  i++ ++ ++v+kae+++++++e+++ ++++k + s+++ + +++e +  +n k+ + + +++  ++   + +                         
  EPX74314.1  531 INELNSVKQVTKAELDMLLEQEKNSdEEQQKAKSSLEKLLAEQKEKTQLLNSKKTHHHSIKKESQNLARNVSdlkqkknelhriiaqsrvkleeirs 627 
                  455577889999999999966555536677888999999999999999999999999999986555444444888999999999999999999**** PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX74314.1  628 tlsssrsrgnvlgglqtlhdsgqltgfhgrlgdlatidskydvaistacpalnhivvdnlevgqkciaflrsnnlgrssfivlgalqeknlkpiqtp 724 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX74314.1  725 envprlfdllhykdnifapaffsvlqntlvadnleqanriafgktrwrvvtlngqlidksgtmtgggtrvkqggmasqlpaeispvalnnietqttd 821 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX74314.1  822 aenrhrqvseqlqalleksdilkneipsleleisklhldlsafnnlvegarnqvsnsrmaskderslqdrkqkltsdlkklqqqidsindsnagvva 918 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX74314.1  919 evrelqdkimqiggikyriqkskvddlheqhkfvkekitninfekrkneqrvhsiaqeleslqsdisitekdikmnedelsslrqktkeytgkidkl 1015
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX74314.1 1016 snmihdiddsinelnsrvefeskeinsmkaerldlenklteqksahtdvlnsekkirkllselllhdlreydqsetqapefqefsedelaslnkqsl 1112
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX74314.1 1113 ydgisefkkkteekevdvgvlqsylkctkdaekkaidfeaetqkrnnvkqtvtdlqtqrldefmegfniisqklkamyqiitmggnaelelvdsldp 1209
                  ************************************************************************************************* PP

                  ....................CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC-SCEEEEE CS
                  ....................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  136 ....................lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemlekadklvgvt 212 
                                      +LSgGektL++laL+fA++++kp+ply++DeidaaLD+knv++va+++ke++knaQfivislr++m+e +++lvg++
  EPX74314.1 1210 fsegvlfsimppkkswknisNLSGGEKTLSSLALVFALHSYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIVISLRSNMFELSSRLVGIY 1306
                  ************************************************************************************************* PP

                  EEETTEE CS
                  xxxxxxx RF
       SMC_N  213 kvengvs 219 
                  k+ n ++
  EPX74314.1 1307 KTANMTK 1313
                  *888765 PP

>> SMC_hinge  SMC proteins Flexible Hinge Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.6       2.7   5.4e+03      37      83 ..     558     601 ..     556     617 .. 0.70
   2 !   86.8   0.0   6.2e-28   1.2e-24       2     117 .]     652     765 ..     651     765 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 2.7
   SMC_hinge  37 deetakkiieflkkknagratflpldrikqknkadgandknsgavpl 83 
                  +++ak+ +e l + ++ ++++l  ++ ++ + +++ ++    a+ +
  EPX74314.1 558 EQQKAKSSLEKLLAEQKEKTQLLNSKKTHHHSIKKESQN---LARNV 601
                 678999999999999899999999888777766666655...34444 PP

  == domain 2  score: 86.8 bits;  conditional E-value: 6.2e-28
   SMC_hinge   2 kgvlGrladlievdegyekAveaalgnrlqalvvedeetakkiieflkkknagratflpldrikqknkadgandknsgavplidlvevdde.lrkalry 99 
                 +g++Grl+dl ++d++y++A+++a+ ++l+++vv++ e+ +k+i fl+++n+gr +f++l  ++ kn ++ ++++  ++ +l+dl++++d+ +++a+  
  EPX74314.1 652 TGFHGRLGDLATIDSKYDVAISTAC-PALNHIVVDNLEVGQKCIAFLRSNNLGRSSFIVLGALQEKNLKPIQTPE--NVPRLFDLLHYKDNiFAPAFFS 747
                 689*******************999.67*********************************************99..6********************* PP

   SMC_hinge 100 llgdtlvvdsldeAeela 117
                 +l++tlv+d+l++A+++a
  EPX74314.1 748 VLQNTLVADNLEQANRIA 765
                 ***************986 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.5   0.9   3.1e-10   6.2e-07       3     186 ..     153     307 ..     151     318 .. 0.56
   2 ?   -1.7   0.1      0.97   1.9e+03     155     206 ..     348     401 ..     324     418 .. 0.71
   3 ?   -0.9   2.9      0.55   1.1e+03     120     209 ..     411     502 ..     382     559 .. 0.88
   4 !   22.2   1.6   5.4e-08   0.00011     233     296 ..    1227    1290 ..     933    1290 .. 0.86

  Alignments for each domain:
  == domain 1  score: 29.5 bits;  conditional E-value: 3.1e-10
      AAA_21   3 vliGpNgsGKSnLLdaldllarl.drdvegltdelsggggirkipslldlydpeipfefeieeflsqgvryryglrlersqveeklssvetllesglll 100
                  ++GpNgsGKSn++dal +++++ ++ +++++ ++     i k +  + l + + ++ f     ++++     +l + rs++                 
  EPX74314.1 153 SIVGPNGSGKSNVIDALLFVFGFrASKLRQTKASA----LIHKSAAHPSLESCDVEILFKEV-NPDSSYIEGSELSIRRSAY----------------- 229
                 69*******************97755555555555....33333333333333333333333.3333333333333333333................. PP

      AAA_21 101 dkrsleeedvfnpeargirggvsvfslkelsvsepndlqfgkaltditsrawsllllldglrke.rigllnifadyfgfakekrllq 186
                          + n  ++    ++s+fs ++  ++e   + + k+++ +  + +s+++++ + + e + gll++  d +g ++ k++++
  EPX74314.1 230 ---------KNNVSKYFLNNVESSFSTISNMLKERGVDLNHKRFLILQGEVESIAQMKPKALTEsDDGLLEYLEDIIGTSRYKPIIE 307
                 .........444444444555556666666666666666666666666666666666666666666666666666666655555555 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.97
      AAA_21 155 lllldglrke..rigllnifadyfgfakekrllqrlvrslklveielsdlgege 206
                 l + ++l  +  +  +ln+f  + + + + ++lq+l++s+k  +++   +++++
  EPX74314.1 348 LRDENNLNRKlhTLYQLNLFELNSKRNLITNMLQKLEDSYKSKNDNFNENEKVV 401
                 333333333346999999999999999999999999999999999988887665 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.55
      AAA_21 120 ggvsvfslkelsvsepndlqfgkaltditsrawsllllldglrke..rigllnifadyfgfakekrllqrlvrslklveielsdlgegeeli 209
                    +  + k+++++e  ++q++++    ++++w+ l+++++   +  + + +  +  ++  + +++l  rl+ +  ++ ++ls++++  ++i
  EPX74314.1 411 LKSKAQEFKNSNRAEKRERQRYEQQAVKIEEKWKHLSSKQKKNQKqlETLSAKKSELEYSLDTHGDLHHRLTQEMEEIVSKLSAEEDELNKI 502
                 556677899999****************************9999999999999999999999999999999999999999999998777665 PP

  == domain 4  score: 22.2 bits;  conditional E-value: 5.4e-08
      AAA_21  233 parelSdGtkrll..alltallralkkgsllliDEpEngLHPkllrrllellkelsrngaQviltT 296 
                  ++++lS G k l   al+ al++  +  +l++ DE+++ L+ k ++ ++  +ke ++ +aQ+i+ +
  EPX74314.1 1227 NISNLSGGEKTLSslALVFALHSYKPT-PLYVMDEIDAALDFKNVSIVANYIKERTK-NAQFIVIS 1290
                  67899*******656999999999999.************************99999.9****976 PP

>> KASH_CCD  Coiled-coil region of CCDC155 or KASH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.5   0.8     0.007        14     122     187 ..     276     340 ..     257     343 .. 0.76
   2 ?   -2.5  29.2       1.9   3.8e+03      59     175 ..     395     511 ..     353     523 .. 0.71
   3 ?   -8.3  21.9         9   1.8e+04      84     152 ..     546     621 ..     527     634 .. 0.38
   4 ?    1.3   2.6      0.13   2.5e+02      71     120 ..     814     863 ..     809     885 .. 0.71
   5 !   26.2  22.7   3.1e-09   6.1e-06      12     165 ..     887    1045 ..     880    1068 .. 0.74
   6 ?   -5.7   5.3         9   1.8e+04      20      74 ..    1054    1109 ..    1046    1175 .. 0.60

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.007
    KASH_CCD 122 kkklkeLlkekaeLkkqlheleella.ek.ealleektkqieeLkltieEyssiieeLraeksrLeeq 187
                 + k k L+++ + L + l   e +++ ++   ++eek ++   L+ t +E +   +++ aek++Le+ 
  EPX74314.1 276 QMKPKALTESDDGLLEYL---EDIIGtSRyKPIIEEKINELTALNDTCNEKENRFQLVVAEKNKLESS 340
                 555666666666665555...33332133146899******************************975 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.9
    KASH_CCD  59 lqkaklleeEleelkalvkeleEkrarlkaqnkqlekenqsLiakiesLqeenikllaekdelkkklkeLlkekaeLkkqlhel....eellaekeall 153
                  +++k++++ +eel +l ++ +E +    + n+  ++e+q  +++  +++e+ + l + + +++k+l+ L+++k+eL   l+      ++l+ e e+++
  EPX74314.1 395 NENEKVVAQMVEELNQLKSKAQEFK----NSNRAEKRERQRYEQQAVKIEEKWKHLSSKQKKNQKQLETLSAKKSELEYSLDTHgdlhHRLTQEMEEIV 489
                 4667888888888887777777755....567777899***************************************9998654111145555666666 PP

    KASH_CCD 154 eektkqieeLkltieEyssiie 175
                 ++  ++ +eL+ + e ++  +e
  EPX74314.1 490 SKLSAEEDELNKIRESLRGKTE 511
                 6666666666655555544444 PP

  == domain 3  score: -8.3 bits;  conditional E-value: 9
    KASH_CCD  84 arlkaqnkqlekenqsLiakiesL...qeenikll....aekdelkkklkeLlkekaeLkkqlheleellaekeal 152
                   l  q+k+ + e+q  ++ +e+L   q e ++ll    + +   kk +++L+++ ++Lk++  el++++a+    
  EPX74314.1 546 DMLLEQEKNSDEEQQKAKSSLEKLlaeQKEKTQLLnskkTHHHSIKKESQNLARNVSDLKQKKNELHRIIAQSRVK 621
                 2233333333333333333333321111111111100001122334444445555555554444444444443333 PP

  == domain 4  score: 1.3 bits;  conditional E-value: 0.13
    KASH_CCD  71 elkalvkeleEkrarlkaqnkqlekenqsLiakiesLqeenikllaekde 120
                 ++ + +++ e ++++++ q + l    + L+ +i sL+ e+ kl  + ++
  EPX74314.1 814 NIETQTTDAENRHRQVSEQLQALLEKSDILKNEIPSLELEISKLHLDLSA 863
                 45556666777777777777776666777777788887777777776655 PP

  == domain 5  score: 26.2 bits;  conditional E-value: 3.1e-09
    KASH_CCD   12 dLqlnNkkLaeenskLkkavetaeetnakLteeieeLkkklkstQqalqkaklleeEleelkalvkeleEkrarlkaqnkqlekenqsLiakiesLq 108 
                  +Lq   +kL  + +kL++++++++++na  ++e+ eL+ k+  +Q    k+++ +  +++l +  k ++Ek  +++ ++++ e+   s+ +++esLq
  EPX74314.1  887 SLQDRKQKLTSDLKKLQQQIDSINDSNAGVVAEVRELQDKI--MQIGGIKYRIQKSKVDDLHEQHKFVKEKITNINFEKRKNEQRVHSIAQELESLQ 981 
                  799999*******************************8875..688999***************************999999999999999999999 PP

    KASH_CCD  109 eenikllaekde.......lkkklkeLlkekaeLkkqlheleellaekealleektkqieeLkl 165 
                   ++     ++ +       l++k+ke + ++++L + +h ++  ++e ++ +e   k+i+++k+
  EPX74314.1  982 SDISITEKDIKMnedelssLRQKTKEYTGKIDKLSNMIHDIDDSINELNSRVEFESKEINSMKA 1045
                  7766555555550000000455555555555555555555555555555555555555555543 PP

  == domain 6  score: -5.7 bits;  conditional E-value: 9
    KASH_CCD   20 LaeenskLkkavetaeetnakLteei..eeLkkklkstQqalqkaklleeEleelka 74  
                  L e+ s  +  v ++e +  kL  e+  ++L++  +s  qa ++++  e+El+ l +
  EPX74314.1 1054 LTEQKS-AHTDVLNSEKKIRKLLSELllHDLREYDQSETQAPEFQEFSEDELASLNK 1109
                  555543.34555566777777777742257777777777777777777777776643 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   7.4e-08   0.00015       4      46 ..     130     173 ..     127     187 .. 0.76

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 7.4e-08
      AAA_29   4 lqlvNWgtfdg.hti.eidlkgatlltGpsGsGKSTllDAiqalL 46 
                 l l N  ++ g + i +++++ +  ++Gp+GsGKS ++DA+ +++
  EPX74314.1 130 LTLKNFKSYAGtQIIgPFHPS-FSSIVGPNGSGKSNVIDALLFVF 173
                 566677777774444345544.699****************9987 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.9      0.19   3.8e+02     182     248 ..     270     339 ..     237     350 .. 0.67
   2 ?   -1.6  25.8      0.49   9.8e+02     158     254 ..     369     461 ..     346     499 .. 0.63
   3 !    4.8  11.5    0.0053        11     155     250 ..     457     545 ..     451     547 .. 0.67
   4 !    4.4  25.5    0.0071        14     137     261 ..     503     626 ..     500     635 .. 0.91
   5 ?    2.3  10.8     0.031        61     165     281 ..     815     930 ..     809     940 .. 0.59
   6 !    9.2  12.5   0.00026      0.51     143     250 ..     887     991 ..     881     992 .. 0.85
   7 !   16.4  15.8   1.6e-06    0.0033     168     282 ..     941    1054 ..     934    1068 .. 0.87
   8 ?   -2.0  11.0      0.63   1.2e+03     157     284 ..    1053    1188 ..    1049    1204 .. 0.68

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.19
        Spc7 182 eleklqe.aaeelesidkeeLeelreel..aelkaeieekkkelaelqeqleeleekieelkeqkselee 248
                 e+e++ + + + l+++d   Le l + +  ++ k  ieek +el+ l++  +e+e++++ + ++k++le+
  EPX74314.1 270 EVESIAQmKPKALTESDDGLLEYLEDIIgtSRYKPIIEEKINELTALNDTCNEKENRFQLVVAEKNKLES 339
                 4444444344555556666666666555112334447888888888888888888888888888887766 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.49
        Spc7 158 LekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeae 254
                 L++++++++++l++le  +++ ++++++ ++ +++      eeL++l+++ +e k+  ++ k+e ++ ++q  ++eek+++l+++ ++ +++++   
  EPX74314.1 369 LNSKRNLITNMLQKLEDSYKSKNDNFNENEKVVAQ----MVEELNQLKSKAQEFKNSNRAEKRERQRYEQQAVKIEEKWKHLSSKQKKNQKQLETLS 461
                 55566666666666666666555555555554444....4567777777777777777777777777777777777777777666666666665433 PP

  == domain 3  score: 4.8 bits;  conditional E-value: 0.0053
        Spc7 155 kelLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeei 250
                  e+L+++++el+  l+     + +l+++l+++ e+  +  s +++eL+++re+l+   + i+   + ++e+q+ ++ +e+ki+el++ k+ +++e+
  EPX74314.1 457 LETLSAKKSELEYSLDT----HGDLHHRLTQEMEEIVSKLSAEEDELNKIRESLRGKTEGIS---NAIEEKQKLMAPSEKKINELNSVKQVTKAEL 545
                 33344444444444443....34555555555555555556789999999999999888888...8999999999999999999999998887775 PP

  == domain 4  score: 4.4 bits;  conditional E-value: 0.0071
        Spc7 137 legLkegleenlegleedkelLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleek 235
                  e+L+ + e + +++ee ++l++ +e++++el    +  kael   le++++  ee ++  k +Le+l  e +e  + +++kk+ + + +++ ++l+ +
  EPX74314.1 503 RESLRGKTEGISNAIEEKQKLMAPSEKKINELNSVKQVTKAELDMLLEQEKNSDEE-QQKAKSSLEKLLAEQKEKTQLLNSKKTHHHSIKKESQNLARN 600
                 58899999999999********************99*************9997766.8889************************************** PP

        Spc7 236 ieelkeqkseleeeiaeaervleeck 261
                 +++lk++k+el+  ia+++  lee +
  EPX74314.1 601 VSDLKQKKNELHRIIAQSRVKLEEIR 626
                 ****************9988777766 PP

  == domain 5  score: 2.3 bits;  conditional E-value: 0.031
        Spc7 165 ldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekie...elkeqkseleeeiaeaervleec 260
                 +++   + e+++ +++e+l+ l e+    ++i k+e+ +l  e+++l+ +++++++ ++  ++q+ +++ + +   +l+++k++l +++++ ++ ++  
  EPX74314.1 815 IETQTTDAENRHRQVSEQLQALLEK----SDILKNEIPSLELEISKLHLDLSAFNNLVEGARNQVSNSRMASKderSLQDRKQKLTSDLKKLQQQIDSI 909
                 3444444455555555555555553....3455667777777777777777777777777777776665444311147777888888888877777777 PP

        Spc7 261 kgwsesevsrlkeevkaleel 281
                  ++++  v +++e  +++ ++
  EPX74314.1 910 NDSNAGVVAEVRELQDKIMQI 930
                 777765555555555555544 PP

  == domain 6  score: 9.2 bits;  conditional E-value: 0.00026
        Spc7 143 gleenlegleedkelLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelke 241
                 +l+++ ++l++d ++L++q + +++    +++e  el++++ ++   +     i+k ++  l+e+ + +k++i + + e  + ++++ ++++++e+l++
  EPX74314.1 887 SLQDRKQKLTSDLKKLQQQIDSINDSNAGVVAEVRELQDKIMQIGGIKYR---IQKSKVDDLHEQHKFVKEKITNINFEKRKNEQRVHSIAQELESLQS 982
                 799999************************************99997777...6666666666777777778888888999999999999999999999 PP

        Spc7 242 qkseleeei 250
                  +s +e++i
  EPX74314.1 983 DISITEKDI 991
                 999888887 PP

  == domain 7  score: 16.4 bits;  conditional E-value: 1.6e-06
        Spc7  168 llpeleeekaeleeeleklqeaaeeles...idkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeaervleeck 261 
                   +++l+e+++ ++e++++++ ++++ e+   +  +eLe+l+++++  +++i+  ++el++l+++ +e + ki++l++ ++++ + i+e ++ +e   
  EPX74314.1  941 KVDDLHEQHKFVKEKITNINFEKRKNEQrvhSIAQELESLQSDISITEKDIKMNEDELSSLRQKTKEYTGKIDKLSNMIHDIDDSINELNSRVE--- 1034
                  567899999999999999887555555554455899***************************************************9999998... PP

        Spc7  262 gwsesevsrlkeevkaleelt 282 
                   ++++e++++k+e  +le+++
  EPX74314.1 1035 -FESKEINSMKAERLDLENKL 1054
                  .999*******9999999875 PP

  == domain 8  score: -2.0 bits;  conditional E-value: 0.63
        Spc7  157 lLekqeeeldellpeleeekaele.......eeleklqeaaeelesidkeeLeel.reelaelkaeieekkkelaelqeqleeleekieelkeqkse 245 
                  +L++q++  +++l++ ++ ++ l+       +e+++ +++a e+++  ++eL++l +++l +  +e ++k +e +     l++  +  ++++++  +
  EPX74314.1 1053 KLTEQKSAHTDVLNSEKKIRKLLSelllhdlREYDQSETQAPEFQEFSEDELASLnKQSLYDGISEFKKKTEEKEVDVGVLQSYLKCTKDAEKKAID 1149
                  3444444444444444444443330000000345555558889999999999998456677777777766666666667777777778889999999 PP

        Spc7  246 leeeiaeaervleeckgwsesevsrlkeevkaleeltgw 284 
                  +e+e+++ ++v++   + +++ +++ +e ++ + ++++ 
  EPX74314.1 1150 FEAETQKRNNVKQTVTDLQTQRLDEFMEGFNIISQKLKA 1188
                  ***********************9999999988887765 PP

>> CENP-F_leu_zip  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.3  11.0       8.3   1.7e+04      74     138 ..     343     411 ..     298     417 .. 0.68
   2 ?   -2.6  24.0       2.6   5.1e+03      34     139 ..     395     500 ..     377     501 .. 0.89
   3 ?    2.0  33.1     0.094   1.9e+02       2     138 ..     440     576 ..     439     581 .. 0.87
   4 ?    1.3   9.4      0.16   3.1e+02      41     107 ..     567     633 ..     565     635 .. 0.84
   5 !   15.9   8.9     5e-06    0.0099       2      98 ..     823     929 ..     822     940 .. 0.83
   6 ?    5.1  19.8      0.01        21       5     126 ..     949    1070 ..     943    1085 .. 0.89
   7 ?   -1.5   0.6       1.2   2.4e+03      45     134 ..    1150    1170 ..    1103    1177 .. 0.55

  Alignments for each domain:
  == domain 1  score: -4.3 bits;  conditional E-value: 8.3
  CENP-F_leu_zip  74 dLvalrsekeeLekelqk.kqervseLeslnsslenlleekEqe...kvqmkeeskaaveeLqtqlkel 138
                      + ++ ++ ++L+++l +  q    eL+s +  ++n+l+++E+    k    +e ++ v ++  +l++l
      EPX74314.1 343 VVLDILRDENNLNRKLHTlYQLNLFELNSKRNLITNMLQKLEDSyksKNDNFNENEKVVAQMVEELNQL 411
                     333444566788888876368889999999999999999999885443333445555566666666665 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 2.6
  CENP-F_leu_zip  34 emseenqekvileaEtskaevetlkeeieelaeelreleldLvalrsekeeLekelqkkqervseLeslnsslenlleekEqekvqmkeeskaav 128
                     ++ e+   +++ e  + k +++++k+  +  ++e+++ e++ v++ +  ++L  + +k+q++ ++L + +s+le  l    + + ++ +e+++ v
      EPX74314.1 395 NENEKVVAQMVEELNQLKSKAQEFKNSNRAEKRERQRYEQQAVKIEEKWKHLSSKQKKNQKQLETLSAKKSELEYSLDTHGDLHHRLTQEMEEIV 489
                     455666678888899999999999999999999************************************************************** PP

  CENP-F_leu_zip 129 eeLqtqlkeln 139
                     ++L+++  eln
      EPX74314.1 490 SKLSAEEDELN 500
                     ******99997 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.094
  CENP-F_leu_zip   2 ekkklhvlekLKeserkadsLkdkvenLerelemseenqekvileaEtskaevetlkeeieelaeelreleldLvalrsekeeLekelqkkqerv 96 
                     e+k +h+ +k K+++++ + L  k  +Le  l + +    +++ e+E+   ++++ ++e+++++e+lr  +  +++  +ek++L+   +kk ++ 
      EPX74314.1 440 EEKWKHLSSKQKKNQKQLETLSAKKSELEYSLDTHGDLHHRLTQEMEEIVSKLSAEEDELNKIRESLRGKTEGISNAIEEKQKLMAPSEKKINEL 534
                     7899********************************************************************************76666655555 PP

  CENP-F_leu_zip  97 seLeslnsslenlleekEqekvqmkeeskaaveeLqtqlkel 138
                     ++ +++      +l e+E++  ++++++k+++e+L ++ ke 
      EPX74314.1 535 NSVKQVTKAELDMLLEQEKNSDEEQQKAKSSLEKLLAEQKEK 576
                     555555555556677788888999999999999999999886 PP

  == domain 4  score: 1.3 bits;  conditional E-value: 0.16
  CENP-F_leu_zip  41 ekvileaEtskaevetlkeeieelaeelreleldLvalrsekeeLekelqkkqervseLeslnssle 107
                     ek+  e  ++ + +++ k++ + +++e ++l  ++++l++ k+eL++ + +++ + +e  s+ ss +
      EPX74314.1 567 EKLLAEQKEKTQLLNSKKTHHHSIKKESQNLARNVSDLKQKKNELHRIIAQSRVKLEEIRSTLSSSR 633
                     66666666666667777888899**********************************9999988876 PP

  == domain 5  score: 15.9 bits;  conditional E-value: 5e-06
  CENP-F_leu_zip   2 ekkklhvlekLKeserkadsLkdkvenLerelemseenqekvileaEtskaevet..........lkeeieelaeelreleldLvalrsekeeLe 86 
                     e+++++v e+L++  +k+d Lk+ + +Le e+  +  ++++    +E ++++v++          l++ +++l++ l++l+++++++   +  + 
      EPX74314.1 823 ENRHRQVSEQLQALLEKSDILKNEIPSLELEISKLHLDLSAFNNLVEGARNQVSNsrmaskdersLQDRKQKLTSDLKKLQQQIDSINDSNAGVV 917
                     67899*****************************9999999999999999999888876666777888888888888888888888888888887 PP

  CENP-F_leu_zip  87 kelqkkqervse 98 
                      e+++ q+++ +
      EPX74314.1 918 AEVRELQDKIMQ 929
                     777777777765 PP

  == domain 6  score: 5.1 bits;  conditional E-value: 0.01
  CENP-F_leu_zip    5 klhvlekLKeserkadsLkdkvenLerelemseenqekvileaEtskaevetlkeeieelaeelreleldLvalrsekeeLekelqkkqervs 97  
                      ++ v+ek  +++ ++ + +++v ++ +ele ++++ + ++ +   +  e+++l+++ +e + +  +l+  + ++    +eL+  ++ + ++++
      EPX74314.1  949 HKFVKEKITNINFEKRKNEQRVHSIAQELESLQSDISITEKDIKMNEDELSSLRQKTKEYTGKIDKLSNMIHDIDDSINELNSRVEFESKEIN 1041
                      555788888899999999*************************************************************************** PP

  CENP-F_leu_zip   98 eLeslnsslenlleekEqekvqmkeeska 126 
                      ++++ +++len l e+   +  + ++ k+
      EPX74314.1 1042 SMKAERLDLENKLTEQKSAHTDVLNSEKK 1070
                      *************9988776666655544 PP

  == domain 7  score: -1.5 bits;  conditional E-value: 1.2
  CENP-F_leu_zip   45 leaEtskaevetlkeeieelaeelreleldLvalrsekeeLekelqkkqervseLeslnsslenlleekEqekvqmkeeskaaveeLqtq 134 
                       ea                                                                     + q +++ k++v  Lqtq
      EPX74314.1 1150 FEA---------------------------------------------------------------------ETQKRNNVKQTVTDLQTQ 1170
                      222.....................................................................344445555555555555 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00025      0.49      15      32 ..     153     170 ..     149     277 .. 0.89
   2 ?   -5.6   7.9         9   1.8e+04      52      80 ..     427     462 ..     372     510 .. 0.45
   3 ?   -0.1   3.0      0.63   1.2e+03      24      94 ..     563     631 ..     561     669 .. 0.66
   4 ?   -9.6  17.8         9   1.8e+04      46     126 ..    1164    1248 ..     767    1263 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00025
                 EEEESTTSSHHHHHHHHT CS
                 xxxxxxxxxxxxxxxxxx RF
    ABC_tran  15 aivGenGaGKStLlklla 32 
                  ivG+nG+GKS ++ +l+
  EPX74314.1 153 SIVGPNGSGKSNVIDALL 170
                 69************9986 PP

  == domain 2  score: -5.6 bits;  conditional E-value: 9
                 B-HHHCCHCEEEE-SS.--S-TTSB.HHHH.......H CS
                 xxxxxxxxxxxxxxxx.xxxxxxxx.xxxx.......x RF
    ABC_tran  52 qeleslrkeigvlpqe.pqlfpelt.vren.......e 80 
                 +e+++++++   ++++ ++l ++ + +  +       +
  EPX74314.1 427 RERQRYEQQAVKIEEKwKHLSSKQKkN--QkqletlsA 462
                 333333333333333322222222211..123444441 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.63
                 HHHHHHHHTTSS--SEEEEEETTCEGGG....B-HHHCCHCEEEE-SS--S-TTSBHHHHHHHTCHHHHHHHSTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  24 KStLlkllagllkpteGeilldgkdlke....qeleslrkeigvlpqepqlfpeltvrenesdeeiekalsklgl 94 
                 KS+L klla++ ++t  ++ l++k++++    +e + l ++++ l+q+++   ++ +++   ++++e+++s+l+ 
  EPX74314.1 563 KSSLEKLLAEQKEKT--QL-LNSKKTHHhsikKESQNLARNVSDLKQKKNELHRIIAQS---RVKLEEIRSTLSS 631
                 888888888876543..33.555555554666788888888888888866666664444...4444444444443 PP

  == domain 4  score: -9.6 bits;  conditional E-value: 9
                  TCEGGGB-HHHCCHCEEEE-SS.--S-TTSBHHHH...HHHTCHHHHHHHSTTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHT CS
                  xxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   46 gkdlkeqeleslrkeigvlpqe.pqlfpeltvren...esdeeiekalsklglkelkdtvvksspssLSgGqkqrvalarallkk 126 
                   +dl++q+l ++ + + +++q+ + + + +t++ n   e  + ++ + + +  + ++ ++  ++ s+LSgG+k   +la +++ +
  EPX74314.1 1164 VTDLQTQRLDEFMEGFNIISQKlKAMYQIITMGGNaelELVDSLDPFSEGVLFSIMPPKKSWKNISNLSGGEKTLSSLALVFALH 1248
                  3344444444444444444444222222233444344333333444444444333555555577899999999998888877643 PP

>> CcmH  Cytochrome C biogenesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.3       3.5     7e+03      24      50 ..     396     422 ..     382     431 .. 0.72
   2 ?    9.2   0.6   0.00035       0.7      20      68 ..     883     931 ..     866     943 .. 0.81
   3 ?    0.3   0.1       0.2   3.9e+02      13      40 ..     954     981 ..     947    1011 .. 0.76

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 3.5
                 HHHHHHHHHHHHEE-TTSSS-BTTT-- CS
        CcmH  24 aqeararalseeLRClvCqnqsiadSn 50 
                 ++e+ + ++ eeL  l+ + q+ ++Sn
  EPX74314.1 396 ENEKVVAQMVEELNQLKSKAQEFKNSN 422
                 467777777777777777777777776 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00035
                 -SSHHHHHHHHHHHHHEE-TTSSS-BTTT--SHHHHHHHHHHHHHHHHT CS
        CcmH  20 lkdpaqeararalseeLRClvCqnqsiadSnaelAkdlrrevremlkaG 68 
                  ++ +++ r ++l+++L+ l+ q +si+dSna + +++r+   + ++ G
  EPX74314.1 883 KDERSLQDRKQKLTSDLKKLQQQIDSINDSNAGVVAEVRELQDKIMQIG 931
                 455678899**************************99999877777766 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 0.2
                 XGGGGS--SSHHHHHHHHHHHHHEE-TT CS
        CcmH  13 aaeedeelkdpaqeararalseeLRClv 40 
                 +++ + ++++ ++e+r++++++eL  l+
  EPX74314.1 954 EKITNINFEKRKNEQRVHSIAQELESLQ 981
                 55678899***************97666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1338 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3750  (0.209158); expected 358.6 (0.02)
Passed bias filter:                      671  (0.0374254); expected 358.6 (0.02)
Passed Vit filter:                       237  (0.0132188); expected 17.9 (0.001)
Passed Fwd filter:                       112  (0.00624686); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 3.07u 0.39s 00:00:03.46 Elapsed: 00:00:00.73
# Mc/sec: 5515.00
//
Query:       EPX74315.1  [L=254]
Description: hypothetical protein SOCG_03525 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       594  (0.0331307); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1862.61
//
Query:       EPX74316.1  [L=1013]
Description: mediator complex subunit Med15 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.6e-28   98.1   4.4    3.6e-28   98.1   4.4    4.3  5  Med15_fungi  Mediator complex subunit 15
    2.7e-16   59.3   0.6    1.6e-15   56.8   0.6    2.5  1  KIX_2        KIX domain
    1.2e-09   38.1   2.5    1.2e-09   38.1   2.5    6.3  6  Gal11_ABD1   Gal11 activator-binding domain (ABD1)


Domain annotation for each model (and alignments):
>> Med15_fungi  Mediator complex subunit 15
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.2      0.82   4.9e+03      25      46 ..      11      32 ..       3      52 .. 0.69
   2 ?   -4.0   1.9         3   1.8e+04      24      45 ..     142     162 ..     138     166 .. 0.70
   3 ?   -2.5   1.6         1   6.1e+03      16      40 ..     236     257 ..     224     282 .. 0.61
   4 !   98.1   4.4     6e-32   3.6e-28       2     112 .]     537     646 ..     536     646 .. 0.98
   5 ?   -5.1   2.7         3   1.8e+04      21      35 ..     679     692 ..     662     707 .. 0.49

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.82
  Med15_fungi 25 tnlspeqKaaikqqlqeiqqml 46
                 t++ p+++++i+ q+++   ++
   EPX74316.1 11 TQIRPNERQSIALQIAQTLRII 32
                 4588888888888877765554 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 3
  Med15_fungi  24 itnlspeqKaaikqqlqeiqqm 45 
                  ++ l+p+q++   qq q  qq+
   EPX74316.1 142 VK-LTPQQRQLLYQQSQLQQQQ 162
                  55.8888888888877665554 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 1
  Med15_fungi  16 knavrlkpitnlspeqKaaikqqlq 40 
                  ++   + ++++l+++qK+  +q+ q
   EPX74316.1 236 QK---FRSLQQLQQQQKQDQQQTKQ 257
                  33...34455566777766555544 PP

  == domain 4  score: 98.1 bits;  conditional E-value: 6e-32
  Med15_fungi   2 qlkeklkqiyeevaknavrlkpitnlspeqKaaikqqlqeiqqmlarvdaliplfykltkneeavkrLlqmrimlkeqleklpqdqftikpeyLeklk 99 
                  ++  ++++++e v+++ +r  p++ l ++qK  i++ +++  +m++r+++li lfy+lt neea+ +L+qmr+++k qle l+q++ft +p+++ k+k
   EPX74316.1 537 KMTVRIRELTERVMHSMIRPIPLE-LPHDQKVIIAELVKSAYPMFSRTNQLIYLFYCLTANEEATVQLIQMRHIFKLQLEGLQQGVFTSTPQMMAKIK 633
                  68889*******************.************************************************************************* PP

  Med15_fungi 100 sqiqkyfeyvksq 112
                  ++ ++yf+yv++q
   EPX74316.1 634 EKTSRYFAYVRTQ 646
                  ***********97 PP

  == domain 5  score: -5.1 bits;  conditional E-value: 3
  Med15_fungi  21 lkpitnlspeqKaai 35 
                   + ++  +++q+++ 
   EPX74316.1 679 QQHQQ-QQQQQRNQK 692
                  22222.222222222 PP

>> KIX_2  KIX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.8   0.6   2.7e-19   1.6e-15       2      79 ..       7      81 ..       6      84 .. 0.93

  Alignments for each domain:
  == domain 1  score: 56.8 bits;  conditional E-value: 2.7e-19
       KIX_2  2 sdwratlspeeRqkivnkiletLkk.hlpvsgpeglnelkkiAvrFEekiFskAtskedYlrkislKmlqmetksqnaa 79
                + w+++++p+eRq+i+ +i++tL+  +     + +  +l+++A +FE ++F  A+sk++Yl+++s+K +q++++ +++ 
  EPX74316.1  7 KGWQTQIRPNERQSIALQIAQTLRIiS----PSISEVQLMNMALSFERQAFDGANSKHEYLTTCSKKTAQLRDQIREHL 81
                67***********************55....788899************************************999876 PP

>> Gal11_ABD1  Gal11 activator-binding domain (ABD1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -8.6  10.7         3   1.8e+04      66      80 ..     148     163 ..      72     166 .. 0.56
   2 ?   -8.8   9.0         3   1.8e+04      11      35 ..     201     225 ..     191     257 .. 0.42
   3 !   38.1   2.5   2.1e-13   1.2e-09      15      75 ..     306     366 ..     294     375 .. 0.89
   4 ?   -0.3   1.3       0.2   1.2e+03       8      38 ..     400     431 ..     396     442 .. 0.81
   5 ?   -9.9  11.5         3   1.8e+04       2      24 ..     678     702 ..     677     711 .. 0.63
   6 ?   -1.1   0.9      0.35   2.1e+03       7      34 ..     710     736 ..     702     764 .. 0.75

  Alignments for each domain:
  == domain 1  score: -8.6 bits;  conditional E-value: 3
  Gal11_ABD1  66 Hqqlllks.klqqqqa 80 
                   qll+++ +lqqqq+
  EPX74316.1 148 QRQLLYQQsQLQQQQQ 163
                 3356664314554444 PP

  == domain 2  score: -8.8 bits;  conditional E-value: 3
  Gal11_ABD1  11 qlinqmkvapiPreLLqriPnlPpg 35 
                 q++  +  +  P+  Lq++  +Pp 
  EPX74316.1 201 QISTLLARTGTPPIPLQKLQSMPPA 225
                 3333344444444444444444443 PP

  == domain 3  score: 38.1 bits;  conditional E-value: 2.1e-13
  Gal11_ABD1  15 qmkvapiPreLLqriPnlPpgvntWqqitelaqqkrlsaqdmqiakevykiHqqlllkskl 75 
                 +m + p+P++L  +iP lP++++ W+ ++el +++rl++++ + +  +y+ H q+ll+ + 
  EPX74316.1 306 EMLNIPVPKQLFAQIPGLPSNIKLWRDVIELGKNQRLTPEQAKAIGILYQKHMQVLLQHRQ 366
                 58899***************************************************98873 PP

  == domain 4  score: -0.3 bits;  conditional E-value: 0.2
  Gal11_ABD1   8 qqqqlinqmkvapiPreLLq.riPnlPpgvnt 38 
                  qq    qm++a++ ++ ++ +  n+P +++t
  EPX74316.1 400 SQQAYAQQMRNANVTNQAVNpQGGNIPLNIDT 431
                 5788999******9887665377899999988 PP

  == domain 5  score: -9.9 bits;  conditional E-value: 3
  Gal11_ABD1   2 rqqltsqqqqlinqm..kvapiPre 24 
                 +qq  +qqqq  nq   ++ +iP++
  EPX74316.1 678 QQQHQQQQQQQRNQKqpQAQHIPPQ 702
                 5666666666666541145567765 PP

  == domain 6  score: -1.1 bits;  conditional E-value: 0.35
  Gal11_ABD1   7 sqqqqlinqmkvapiPreLLqriPnlPp 34 
                 + q   in+ ++a +P ++ + +P+ P 
  EPX74316.1 710 QPQNEFINKAQTASLPSQV-RNVPKPPN 736
                 3456799999***999885.66777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1013 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2272  (0.126722); expected 358.6 (0.02)
Passed bias filter:                      553  (0.0308439); expected 358.6 (0.02)
Passed Vit filter:                        79  (0.00440627); expected 17.9 (0.001)
Passed Fwd filter:                        20  (0.00111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.08u 0.30s 00:00:01.38 Elapsed: 00:00:00.50
# Mc/sec: 6094.71
//
Query:       EPX74317.1  [L=1051]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.9e-18   63.3   0.0     0.0012   18.5   0.0    4.6  4  PUF           Pumilio-family RNA binding repeat
    1.9e-10   40.4   0.0    7.2e-10   38.5   0.0    1.9  2  RRM_1         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
  ------ inclusion threshold ------
      0.091   12.6   0.0       0.28   11.1   0.0    1.8  1  RRM_occluded  Occluded RNA-recognition motif


Domain annotation for each model (and alignments):
>> PUF  Pumilio-family RNA binding repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   9.5e-07    0.0057       4      34 ..     762     792 ..     761     793 .. 0.86
   2 !    8.2   0.0   0.00036       2.2       3      30 ..     797     825 ..     795     829 .. 0.80
   3 !   18.5   0.0   1.9e-07    0.0012       5      29 ..     836     859 ..     833     865 .. 0.73
   4 !   14.6   0.0   3.3e-06      0.02       5      29 ..     871     896 ..     868     901 .. 0.82

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 9.5e-07
                 GGHHHHHTSTTHHHHHHHHHHHSCHHHHHHH CS
         PUF   4 gnlvqLstdqyGnyvvQkllehateeqkkli 34 
                 +++ +L++d  Gn vvQkl+++++ + k+ +
  EPX74317.1 762 DEVSDLASDHLGNTVVQKLFDYCSDPVKEMM 792
                 57789*****************998877766 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.00036
                 GGGHHHHHTSTTHHHHHHHHHHH.SCHHH CS
         PUF   3 kgnlvqLstdqyGnyvvQklleh.ateeq 30 
                  ++l q+ ++++G+++ Qk+ ++ +t +q
  EPX74317.1 797 APHLAQIGIHKNGTWAAQKIVDVaSTDSQ 825
                 68999******************444444 PP

  == domain 3  score: 18.5 bits;  conditional E-value: 1.9e-07
                 GHHHHHTSTTHHHHHHHHHHHSCHH CS
         PUF   5 nlvqLstdqyGnyvvQkllehatee 29 
                 ++  L  dq+GnyvvQ++l  ++++
  EPX74317.1 836 YVPLLFADQFGNYVVQTCLR-FGSP 859
                 5556666************9.4544 PP

  == domain 4  score: 14.6 bits;  conditional E-value: 3.3e-06
                 GHHHHHTSTTHHHHHHHHHHH.SCHH CS
         PUF   5 nlvqLstdqyGnyvvQklleh.atee 29 
                  ++++++ +yG+++++++le   + e
  EPX74317.1 871 QFWVIAQSRYGSRAIRTCLESpDVVE 896
                 6899****************755444 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.5   0.0   1.2e-13   7.2e-10       1      64 [.     580     638 ..     580     641 .. 0.97
   2 ?   -1.7   0.0      0.45   2.7e+03      13      41 ..     665     694 ..     647     696 .. 0.64

  Alignments for each domain:
  == domain 1  score: 38.5 bits;  conditional E-value: 1.2e-13
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkkl 64 
                 l+VgnLp  ++ +++ + F   G++ +i++ +     +k  af++F+s   A+ +le+lngk +
  EPX74317.1 580 LWVGNLPAGISSDTVVATFASHGSVINIRMLS-----HKHSAFINFDSVNTAKYILEELNGKCI 638
                 79******************************.....6***********************987 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.45
                 HHHHHHHHTTSCEEEEEEEEE.TTTSEEEE CS
       RRM_1  13 eeLkelFskfGpiksiklvrd.etgkskgf 41 
                 + L + Fs++  ++s++ v+d   g  k f
  EPX74317.1 665 DGLNKAFSNVSFVTSLREVYDdIIGVIKSF 694
                 456677777777777776666555555555 PP

>> RRM_occluded  Occluded RNA-recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   4.7e-05      0.28       8      61 ..     584     636 ..     578     649 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 4.7e-05
  RRM_occluded   8 plsDtvnkariralveekegeikkivLvpdheGAivefkdekiagkasL.aLdgs 61 
                   +l+  ++++ + a + ++ g++ +i + + +++A++ f+++++a k++L +L+g+
    EPX74317.1 584 NLPAGISSDTVVATFASH-GSVINIRMLSHKHSAFINFDSVNTA-KYILeELNGK 636
                   89999*************.*******************999876.6666257776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1051 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       731  (0.0407719); expected 358.6 (0.02)
Passed bias filter:                      452  (0.0252106); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.78u 0.34s 00:00:01.12 Elapsed: 00:00:00.50
# Mc/sec: 6279.54
//
Query:       EPX74318.1  [L=318]
Description: Swr1 complex subunit Swc2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-33  117.3  32.5    1.5e-33  117.0  32.5    1.1  1  YL1       YL1 nuclear protein
    2.1e-11   43.4   0.0    4.1e-11   42.5   0.0    1.5  1  YL1_C     YL1 nuclear protein C-terminal domain


Domain annotation for each model (and alignments):
>> YL1  YL1 nuclear protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.0  32.5   1.6e-37   1.5e-33       1     243 [.      11     231 ..      11     232 .. 0.68

  Alignments for each domain:
  == domain 1  score: 117.0 bits;  conditional E-value: 1.6e-37
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxx RF
         YL1   1 RarRstAGnrlkkLleqeeeedelellFaEeedDeefeseeeeeeeensDsdfdsdeedeesdeeedeeegekelerqerkkr..kkekkkrkaqkkks 97 
                 R+rR++AGn+l+ Lle+e+    +e+  + e++Dee++ e e + e   D+d+  ++ed es+e+e+e++ e   +++e+  r  +k++k+r + ++++
  EPX74318.1  11 RSRRANAGNKLRDLLEKEHLRASVEE--ESEKEDEEYSFEREVDAE--RDIDI--SSEDSESEEGEEEQQVEL-AQKEEKLLRqeEKSEKRRLQRSRIT 102
                 99*************99998666666..5588*******9887766..67666..444444444444333333.2344444444322223333333333 PP

                 xxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         YL1  98 kkkkkkqkkkkkkkidpqakep.rpkkkseraswlpaeslltpkrRkssRastvenkeqleerlkereerrkkilermrkkaarkkkkkkerplTQeer 195
                 + +k +  + k + + p+++ep   kk  ++++  p+      +rR+ssR +t++ ++ +e rl+e++ r        rk   ++   +++ +lTQ++r
  EPX74318.1 103 NLQK-SLGTPKIR-V-PEKNEPgIGKKTYKKQKLDPS------SRRTSSRMHTIRMTQSTEHRLQEARPR--------RKYTVHAGGDRTKFRLTQQQR 184
                 3333.33333333.1.223344344444455555555......59**********************999........666666667777789****** PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxx RF
         YL1 196 LaeAketEeeNlksLnryeeqEeekkkeqraklaalkrrkl.gpvirfl 243
                 L+eA++tE  N+ sL++y + Ee++k + r ++aa + r+l gpv++f+
  EPX74318.1 185 LEEAAKTEAFNIGSLRNYVNYEEQRKLRLR-RSAAKH-RRLqGPVLKFI 231
                 **************************6666.555665.5555****997 PP

>> YL1_C  YL1 nuclear protein C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.5   0.0   4.5e-15   4.1e-11       2      28 ..     273     299 ..     273     300 .. 0.97

  Alignments for each domain:
  == domain 1  score: 42.5 bits;  conditional E-value: 4.5e-15
       YL1_C   2 CdITGlpAkYrDPkTgLpYanveaykv 28 
                 C+ITG+ A Y+DP T+Lp+an+ a+++
  EPX74318.1 273 CAITGKRAIYMDPLTRLPFANAAAFQE 299
                 *************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (318 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1888  (0.105304); expected 358.6 (0.02)
Passed bias filter:                      503  (0.0280551); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 2277.75
//
Query:       EPX74319.1  [L=288]
Description: ADP-ribose diphosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-13   50.1   0.0    6.9e-12   45.6   0.0    2.1  2  NUDIX     NUDIX domain


Domain annotation for each model (and alignments):
>> NUDIX  NUDIX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    2.6   0.0    0.0075   1.3e+02      90     118 ..      85     116 ..      51     128 .. 0.58
   2 !   45.6   0.0   3.8e-16   6.9e-12       5      89 ..     138     222 ..     136     260 .. 0.69

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.0075
                 EEECSGCSST.STTTEEEEEEEEHHHH..HHH CS
       NUDIX  90 eevegelepn.denevsevrwvpleel..lke 118
                  ++++   ++  + e+++++w +l+++  +++
  EPX74319.1  85 SQEQEPKILDvSDLETKDAKWTSLKKItwQDQ 116
                 333333333347999**********9954333 PP

  == domain 2  score: 45.6 bits;  conditional E-value: 3.8e-16
                 EEEEE.EEETTSE..EEEEEESSSSTTT...EESSEEECBTTSHHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE CS
       NUDIX   5 avgvv.llnekge..vLlvrrskkpfpg...WelPgGkvepgEtpeeAArREleEEtGleaellellgrlhylapydgpygdeheilyvfl 89 
                 av+++ ++  +ge  vL ++++ +p+ g    e+P+G v+ +E+pee A+REl+EEtG+    ++  +    + +y++p  ++  + ++++
  EPX74319.1 138 AVAILgIIPIDGEphVLCQKQY-RPPLGktcIEIPAGLVDSDESPEESAVRELREETGFVG-VVKEAT----TIMYNDPGLTNANLKIILV 222
                 556666666666666*******.9999974335*************************522.222222....2334555555555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       450  (0.025099); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2085.01
//
Query:       EPX74320.1  [L=362]
Description: transcription like zf-ZZ type zinc finger protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-24   84.9  46.8    2.2e-10   40.2  11.4    3.8  3  ZZ          Zinc finger, ZZ type
    2.3e-11   44.3   0.0      5e-11   43.2   0.0    1.5  1  N_BRCA1_IG  Ig-like domain from next to BRCA1 gene
      2e-05   24.8  38.4      0.014   15.7   6.5    3.7  3  C1_2        C1 domain
  ------ inclusion threshold ------
        3.1    8.0  50.0       0.29   11.3   6.8    4.5  4  zf-UBR      Putative zinc finger in N-recognin (UBR box)


Domain annotation for each model (and alignments):
>> ZZ  Zinc finger, ZZ type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5  12.5   5.8e-07    0.0026       3      41 ..      35      74 ..      33      77 .. 0.89
   2 !   38.6   6.9   1.5e-13   6.7e-10       6      43 ..     109     146 ..     105     148 .. 0.92
   3 !   40.2  11.4   4.8e-14   2.2e-10       6      45 .]     185     224 ..     180     224 .. 0.94

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 5.8e-07
                S-EE-TTT-S..EESSEEEESSSSS-EE-HHHHHH..H-- CS
          ZZ  3 kkytCdgCseapligvRyhclrcsdYDLCqsCfst.hkag 41
                  + C+ C +    +v +hc  c d+D C sC+s  ++++
  EPX74320.1 35 SSVACNSCLKLIYDQVYFHCKDCLDFDVCRSCYSNqKFTH 74
                6799******88889999****************988887 PP

  == domain 2  score: 38.6 bits;  conditional E-value: 1.5e-13
                 E-TTT-S..EESSEEEESSSSS-EE-HHHHHH..H---S CS
          ZZ   6 tCdgCseapligvRyhclrcsdYDLCqsCfst.hkagkh 43 
                 +Cd C + p+ + R +c  c+dYDLC+sCf++   +++h
  EPX74320.1 109 ICDACEQ-PIKNLRLKCGTCDDYDLCSSCFPSnEHTKTH 146
                 7******.************************8777777 PP

  == domain 3  score: 40.2 bits;  conditional E-value: 4.8e-14
                 E-TTT-S..EESSEEEESSSSS-EE-HHHHHH.H---SSE CS
          ZZ   6 tCdgCseapligvRyhclrcsdYDLCqsCfsthkagkhkm 45 
                 +Cd C + p++g+Ry+cl+c+d DLC++C +  ++ +h+m
  EPX74320.1 185 QCDSCHAHPIVGNRYKCLVCKDSDLCFECVNHTFHYNHEM 224
                 7*******************************9*****99 PP

>> N_BRCA1_IG  Ig-like domain from next to BRCA1 gene
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.2   0.0   1.1e-14     5e-11      10      96 ..     262     351 ..     258     354 .. 0.84

  Alignments for each domain:
  == domain 1  score: 43.2 bits;  conditional E-value: 1.1e-14
  N_BRCA1_IG  10 pgteftktWrlrNtGseaWpagtklvfvgGdkmgsasaeessvs.vpavapgeevevsvelkaPskp...gryisywrlatedgseFGdrl 96 
                 p++   k+W+l+N +s  Wp+  +l+f gGdk++s   ++s++  +++v+pge++ +++++++Ps +    +y s ++l+te+gs F ++l
  EPX74320.1 262 PNSSCIKIWQLKNISSDVWPTPLYLKFNGGDKLISDD-NSSTLPiTRQVQPGESALIALSIRIPSAEvckKTYFSFFQLVTESGSVFHKNL 351
                 89999****************************8523.3455545999****************8762225677888*****9*9998776 PP

>> C1_2  C1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   9.4   8.3e-05      0.37       7      46 ..      28      66 ..      24      67 .. 0.86
   2 !   15.7   6.5     3e-06     0.014      19      46 ..     108     136 ..      97     137 .. 0.89
   3 !    9.4   6.6   0.00029       1.3      16      47 .]     181     214 ..     172     214 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 8.3e-05
        C1_2  7 LtlskgedssesfnCsaCgrk.idgffYsCseC.dfslhvrC 46
                Lt++   ++s+s  C+ C +   d+ +++C+ C df ++ +C
  EPX74320.1 28 LTFN---EKSSSVACNSCLKLiYDQVYFHCKDClDFDVCRSC 66
                7777...89999********9445555*************** PP

  == domain 2  score: 15.7 bits;  conditional E-value: 3e-06
        C1_2  19 fnCsaCgrkidgffYsCseC.dfslhvrC 46 
                   C+aC+++i++ + +C +C d+ l+++C
  EPX74320.1 108 SICDACEQPIKNLRLKCGTCdDYDLCSSC 136
                 57******************66******* PP

  == domain 3  score: 9.4 bits;  conditional E-value: 0.00029
        C1_2  16 sesfnCsaCgrk.idgffYsCseC.dfslhvrCa 47 
                 +   +C+ C    i g++Y+C  C d  l+++C+
  EPX74320.1 181 HRFSQCDSCHAHpIVGNRYKCLVCkDSDLCFECV 214
                 55679****999988*********88*******6 PP

>> zf-UBR  Putative zinc finger in N-recognin (UBR box)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.5      0.15   6.6e+02      21      32 ..      27      44 ..       6      47 .. 0.63
   2 ?    2.1  11.6     0.049   2.2e+02       3      44 ..      40      79 ..      38      86 .. 0.69
   3 ?   11.3   6.8   6.5e-05      0.29      10      50 ..     119     157 ..     100     162 .. 0.77
   4 ?    6.4  13.7    0.0022       9.8      12      53 ..     198     234 ..     167     236 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.15
      zf-UBR 21 d......etsviCeeCfk 32
                +      ++sv C++C k
  EPX74320.1 27 KltfnekSSSVACNSCLK 44
                255554466788888865 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.049
      zf-UBR  3 tkvfkkg..evvyrCltCsldetsviCeeCfkaskHeghelvel 44
                + ++k    +v+++C++C   +   +C +C+ ++k   h++++ 
  EPX74320.1 40 NSCLKLIydQVYFHCKDCLDFD---VCRSCYSNQK-FTHSCLKA 79
                5544443449********9955...9*****9994.44555455 PP

  == domain 3  score: 11.3 bits;  conditional E-value: 6.5e-05
      zf-UBR  10 evvyrCltCsldetsviCeeCfkaskH.eghelvelstkrng 50 
                 ++  +C tC     + +C++Cf +++H + h++v+++++  +
  EPX74320.1 119 NLRLKCGTCDD---YDLCSSCFPSNEHtKTHSFVRITKSYPN 157
                 55667888887...55***********889**9999887665 PP

  == domain 4  score: 6.4 bits;  conditional E-value: 0.0022
      zf-UBR  12 vyrCltCsldetsviCeeCfkaskHeghelvelstkrnggvC 53 
                  y+Cl C+ ++   +C+eC++++ H +he++ l+ +++  +C
  EPX74320.1 198 RYKCLVCKDSD---LCFECVNHTFHYNHEMICLTRSST--SC 234
                 59999999977...****************77776665..55 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (362 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       726  (0.0404931); expected 358.6 (0.02)
Passed bias filter:                      204  (0.0113782); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 2535.42
//
Query:       EPX74321.1  [L=1391]
Description: SHREC complex subunit Mit1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.1e-56  192.1   2.2    2.6e-56  190.9   2.2    1.5  1  SNF2_N       SNF2 family N-terminal domain
    6.1e-37  125.8   3.1    1.1e-36  125.0   0.2    2.9  3  zf-CCCH_7    Chromatin remodeling factor Mit1 C-terminal Zn f
    9.7e-19   67.8   0.1    4.9e-18   65.5   0.0    2.3  1  Helicase_C   Helicase conserved C-terminal domain
    1.4e-14   53.7   0.0    1.4e-14   53.7   0.0    2.6  2  zf-CCCH_6    Chromatin remodeling factor Mit1 C-terminal Zn f
    8.5e-14   51.4   6.3    2.5e-13   49.9   6.3    1.8  1  HDA2-3       Class II histone deacetylase complex subunits 2 
      3e-07   30.6   0.1    1.5e-06   28.3   0.0    2.3  2  ResIII       Type III restriction enzyme, res subunit
    1.8e-05   24.5   8.2    1.8e-05   24.5   8.2    2.4  1  PHD          PHD-finger
    3.9e-05   23.5   4.7     0.0012   18.7   1.2    2.8  2  Chromo       Chromo (CHRromatin Organisation MOdifier) domain
  ------ inclusion threshold ------
       0.12   12.2  11.3      0.074   12.9   7.9    2.2  2  PHD_Oberon   PHD - plant homeodomain finger protein
       0.14   11.8  11.0        3.4    7.3   6.5    2.6  2  zf-PHD-like  PHD/FYVE-zinc-finger like domain
       0.48   10.4   3.9        5.1    7.0   0.2    3.6  3  Peroxin-22   Peroxisomal biogenesis protein family
        2.2    8.4   5.9         10    6.3   5.9    2.3  1  PHD_4        PHD-finger


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  190.9   2.2   1.7e-59   2.6e-56      54     349 ..     575     849 ..     561     850 .. 0.87

  Alignments for each domain:
  == domain 1  score: 190.9 bits;  conditional E-value: 1.7e-59
                 TT--EEE---TTS--HHHHHHHHH...HHTTTS---.......S-EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH---------------... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx... RF
      SNF2_N  54 svrGGiLaDemGLGKTvqvlalilaqrakeekdkekkrkdtlagptLivvPaslldqWeneierhvsssalrvlvyggqkkmkkkntkvapkllad... 149
                 + + +iLaDemGLGKTvqv+++i      ++        ++  +p+LivvP +++ +We+e++++ +s  +  lv++++++++ +++++ ++   d   
  EPX74321.1 575 QRQHCILADEMGLGKTVQVISFIS---VLYH--------RHHCFPFLIVVPHATVANWEREFHKWDPSLLVATLVGSERNREVVREHRIYQNGNFDsir 662
                 5677********************...4344........44579********************************99988666655554443332111 PP

                 --EEEE-HHHHHHHT......TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHHHHHHH-TTTT--HHHHHHHTHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 150 ydvvittYdvlsreaelqkkrsvlkqvewkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledlygLlkfLreepfgekqtfdkllqrp 248
                 ++v+i++ + + +      ++s lk+ +w+++++DEg++lk+ +s++ + + ++++  + +ltGTP+qn+ ++l+ Ll+fL +++ +      + l+r+
  EPX74321.1 663 THVLIISTSSVDS------EISLLKKFRWQCMIIDEGQRLKSDQSSLFNDLISIEATFKALLTGTPLQNNIRELFNLLQFLTPDKID-----ASELERE 750
                 5677776666664......56******************************************************************.....7889*** PP

                 HHHHHHHHHHHHHTT-STTEE---GGGT--S---EEEEEEEEE--HHHHHHHH....................HHHHHH-HHH-HHHHHHHHHHHHH-- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 249 ieaqaekgrsrLlqllqrlmlrrakkdveknlPpkteeiiflklskverksYnrllevlrkkalakllkrseaalkssskskekilelllelrqacnhp 347
                 +e+ +e+++ +L+q+l+++ lrr+k++v + lPpk+e i+ l +++ ++k+Y+ l+ ++  + ++++ ++s+a+ +s+s s++ + ++l++lr++  hp
  EPX74321.1 751 YEHIDEEKVIELHQMLKPFFLRRVKEEVLERLPPKVEVIVPLTMTPLQKKLYK-LIVSKNVDLIQSIVSKSRAKSNSNS-SRASLSNILMQLRKTLAHP 847
                 *****************************************************.7777777778888888777777666.45779999**********9 PP

                 -X CS
                 xx RF
      SNF2_N 348 ql 349
                 +l
  EPX74321.1 848 YL 849
                 87 PP

>> zf-CCCH_7  Chromatin remodeling factor Mit1 C-terminal Zn finger 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0       1.4   2.1e+03       8      37 ..     159     190 ..     153     225 .. 0.81
   2 ?   -3.1   0.0       6.8     1e+04       8      50 ..    1092    1136 ..    1086    1137 .. 0.76
   3 !  125.0   0.2   7.5e-40   1.1e-36       2      90 .]    1245    1328 ..    1244    1328 .. 0.98

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 1.4
                 HHHHHHHHHHHHT-----------B----..- CS
   zf-CCCH_7   8 tlkiinlevkrkvekseyvrelekDdpvf..s 37 
                   +i + + k+k+e+ e++ + e  d++f  +
  EPX74321.1 159 RKRIHQSNKKNKLELFEKISSNEDSDTLFqiP 190
                 455667778999*******9999999999444 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 6.8
                  HHHHHHHHHHHHT-----------...B-----S--S-----EESS CS
   zf-CCCH_7    8 tlkiinlevkrkvekseyvrelek...DdpvfsykviekehrLvan 50  
                  t   +n + k +  + + ++++e    Dd ++  +++ +++++  n
  EPX74321.1 1092 TRVWVNNQEKSAALENDSLNKSEGpiqDDDIW-LDILRQREQVASN 1136
                  56668888899999999999998777899998.7888887776655 PP

  == domain 3  score: 125.0 bits;  conditional E-value: 7.5e-40
                  TTSS-HHHHHHHHHHHHHT-----------B-----S--S-----EESS---HHHHHHHHHTT--SSS-B-TTT--B--TT--GGGT-- CS
   zf-CCCH_7    2 edeaaktlkiinlevkrkvekseyvrelekDdpvfsykviekehrLvansvsklvldnflalysvddsvrCrcCgieHvPgrCpLskvP 90  
                  +++aa++++i+n++++r+++k++yvr+++kDd++f     +++++Lvan+++k+v+dnfla++++d+s++C+cCgieHvPgrCpL+kvP
  EPX74321.1 1245 RLKAASNPMIFNDLNQRAIWKPQYVRSFQKDDSLF-----AHKNLLVANRIPKFVFDNFLATFFDDKSIACKCCGIEHVPGRCPLNKVP 1328
                  789********************************.....************************************************9 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.5   0.0   3.3e-21   4.9e-18       6     111 .]     877     987 ..     873     987 .. 0.88

  Alignments for each domain:
  == domain 1  score: 65.5 bits;  conditional E-value: 3.3e-21
                 HHHHH..HHTTTTSEEEEEESSHHHHHH.HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH...TTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHH CS
  Helicase_C   6 llell..kleeeggkilifvntidrlek.vklllekkgikvavlhgelpqnereeileqfn...kgesdvLiatdvaerGidipkvnlVinfdlprnvt 98 
                 ll+ll  kl  +g++il+f++++++l+   +++  +k+i++ +++g+++  +r++ +++fn   +++s +L++t++++ Gi++ ++++Vi++d+++n++
  EPX74321.1 877 LLRLLipKLIMRGHRILLFSQFVQQLDIlEDWM-DHKDISYSRFDGTTTEHDRQKEIDSFNspnSKKSCFLLTTRAGGVGINLASADTVIILDPDFNPH 974
                 45555688999***************8755555.6668***********************88445555****************************** PP

                 HHHHHHTTSSSTT CS
  Helicase_C  99 syiqriGRtgRag 111
                 + +q+i R++R+g
  EPX74321.1 975 QDMQAIARAHRYG 987
                 ***********86 PP

>> zf-CCCH_6  Chromatin remodeling factor Mit1 C-terminal Zn finger 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.1       6.4   9.6e+03      32      48 ..     998    1014 ..     989    1016 .. 0.72
   2 !   53.7   0.0   9.5e-18   1.4e-14       1      52 [.    1330    1381 ..    1330    1382 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 6.4
                  HHHT--S-HHHHHHHHH CS
   zf-CCCH_6   32 aLkeStEprelveeAkk 48  
                   +++S+E++ l+++ kk
  EPX74321.1  998 IIRNSAEEKILQAAQKK 1014
                  57899999999877666 PP

  == domain 2  score: 53.7 bits;  conditional E-value: 9.5e-18
                  EB-TTTSSB--SSSS--GGGSSHHHHHHHHHHHHT--S-HHHHHHHHHHHHT CS
   zf-CCCH_6    1 EhCgLCglAHfGekrtCPhlksetqvrrmleaLkeStEprelveeAkkyLrg 52  
                  E+C+LCg++Hf++k+tCP l++ t+v+ + + L +S+Ep  ++  A ++L+g
  EPX74321.1 1330 EICFLCGTPHFSGKDTCPLLRDTTTVKILRNLLANSREPLPTKLLALERLNG 1381
                  9*************************************************98 PP

>> HDA2-3  Class II histone deacetylase complex subunits 2 and 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.9   6.3   1.7e-16   2.5e-13       7     274 ..     789    1036 ..     786    1045 .. 0.84

  Alignments for each domain:
  == domain 1  score: 49.9 bits;  conditional E-value: 1.7e-16
                  EEEE---HHHHHHHHHHHHHTHHHHHHHHHSTTT--HHHH.HHHHHHHH.HHHHHHH-GGGT--TT--S-S-STTHHHHHHHT-HHHHHHHHHHHHH CS
      HDA2-3    7 ylPtpltelqkelteqivslhyedllkyvetsdsqeklslsikslticlenlslvanHPsLLvdHympkklllkelpeklaetSgKFkvlndlvnli 103 
                   +P+++t lqk l++ ivs     + + v+ s  +++ ++s  sl+ +l +l+    HP+L    + +k+   +     l+e S+K+ +l+ l+  +
  EPX74321.1  789 IVPLTMTPLQKKLYKLIVSKNVDLIQSIVSKSRAKSNSNSSRASLSNILMQLRKTLAHPYLYSPDVEEKDVSEELSIRSLEEASAKMLLLRLLIPKL 885 
                  58********************9999999999999888888888888888**********************99999******************** PP

                  TTSS....EEEEEEE-STHHHHHHHHHHTTSSSEEEESSS--S--S---S-..................-SEEEEEEESS---TTTS--TT-S-EEE CS
      HDA2-3  104 ierkrksslnvlvvakskkeldLiEalllGkklkikrysgeklydekkkkskdtkknsrktkeklkkkihsltihllsttrqltkdksllenikfdl 200 
                  i r       +l+ ++ +++ld++E  +  k++++ r++g++  ++ +k             +++++ ++++ + ll+t           +   +d 
  EPX74321.1  886 IMRG----HRILLFSQFVQQLDILEDWMDHKDISYSRFDGTTTEHDRQKEI-----------DSFNSPNSKKSCFLLTTRAGG----VGINLASADT 963 
                  ****....9********************************9999988888...........455666677777777665433....44667778** PP

                  EEE-SST--TTSHHHHHHH----.------EEEEEETTSHHHHHHHHTS-TT-HHHHHHHHHHHHHHTTTTT--- CS
      HDA2-3  201 iiafDssvdtsspsveslrtqnr.kknklpiirlvpinSieHvkLcfkkdedepeylekvissivvlrdevGkLp 274 
                  +i +D++++++++     r ++  +++k+ ++ l+  nS e   L+  +++   +++  v++s+    d+v +L 
  EPX74321.1  964 VIILDPDFNPHQDMQAIARAHRYgQDKKVLVFSLIIRNSAEEKILQAAQKKMLLDQI--VVQSMGENNDNVMDLH 1036
                  ***********999888888764145569*************999999333333333..5666666666665555 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.2       5.5   8.2e+03      77     120 ..     144     183 ..     134     200 .. 0.54
   2 !   28.3   0.0     1e-09   1.5e-06       3     169 ..     557     722 ..     555     724 .. 0.74

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 5.5
                 GTGG....GEEEESSS-B--.......-SEEEEEHHHHHHTH.. CS
      ResIII  77 flseaykeigkkvsgdkkkakekdstnkkilvttiqsldadsee 120
                  l++a    +++++++++++k+++++nkk  ++  +++++++++
  EPX74321.1 144 SLPNA----ETVFRNNEHDRKRIHQSNKKNKLELFEKISSNEDS 183
                 44444....23333333444455666666666666666665544 PP

  == domain 2  score: 28.3 bits;  conditional E-value: 1e-09
                 EE-HHHHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG..........GEEEESSS-B- CS
      ResIII   3 elreyQeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkeekflflvprkslleqtleefkkflseayke......igkkvsgdkkk 95 
                 +l +yQ++ ++ l  ++   ++++ +++ + G GKT+  +++i  l++ ++   fl++vp  ++   +++ef k+ ++   +               ++
  EPX74321.1 557 KLMPYQIQGVNWLYFQW--IQRQHCILADEMGLGKTVQVISFISVLYHRHHCFPFLIVVPHATVA-NWEREFHKWDPSLLVAtlvgseR--------NR 644
                 67899999999998777..49999*************************************9986.6999**88877765333333221........22 PP

                 -.................-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS...TTTHHHHHT---SEEEEEESS- CS
      ResIII  96 a..........kekdstnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgak..kswreilekfkeavllglTATp 169
                 +           + ds  +++l+++++s+d+++         l++ r +++iiDE  rl+++  + ++ +  ++++ ++  lT+Tp
  EPX74321.1 645 EvvrehriyqnGNFDSIRTHVLIISTSSVDSEI-------SLLKKFRWQCMIIDEGQRLKSDqsSLFNDL-ISIEATFKALLTGTP 722
                 234444444344445667888888888888888.......777777888**********99743245553.344666666678887 PP

>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   8.2   1.2e-08   1.8e-05       2      51 ..     222     277 ..     221     278 .. 0.88

  Alignments for each domain:
  == domain 1  score: 24.5 bits;  conditional E-value: 1.2e-08
                 BTTTTS..TTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSS....TBSSTTTHT CS
         PHD   2 CavCkk..ksdeeeelvqCdgCkrwfHqkClkppleseekpeg....ewlCekCke 51 
                 C  C+   ++ +++++++C +C ++fH++C +++  ++ ++ +     + C++C++
  EPX74321.1 222 CVKCHHheSKGDDRKFIYCRTCTNTFHVECSGISTLTKMRQAEisveGYSCSSCSK 277
                 999*998777789********************98877777778888*******86 PP

>> Chromo  Chromo (CHRromatin Organisation MOdifier) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.1     0.014        21      18      53 ..     400     435 ..     382     436 .. 0.84
   2 !   18.7   1.2   8.1e-07    0.0012       4      43 ..     456     508 ..     453     516 .. 0.74

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.014
                 EEEEEEETTSTGGGTEEEEGGGCSSHSHHHHHHHHH CS
      Chromo  18 leYlVKWkglpysentWEpeenlekcfqelideFkk 53 
                  eY+V+ k+ +y ++ W +++ l++ ++ + ++F++
  EPX74321.1 400 REYYVRPKNHSYLHCFWCSASWLASVSNTKKRNFDS 435
                 59*****************99998887777777766 PP

  == domain 2  score: 18.7 bits;  conditional E-value: 8.1e-07
                 EEEEEEEEETTEEC.............EEEEEEETTSTGGGTEEEEGGGCSSH CS
      Chromo   4 erIidhrtdkdgle.............leYlVKWkglpysentWEpeenlekc 43 
                 +++ ++r++ +++              ++ +V W+glpy  ++WE+++++   
  EPX74321.1 456 DKVWNVRYRNSRKFgskekqlqaltnvEKAYVSWRGLPYLMSSWESITDIHGL 508
                 5666666555555555666677888888999*******************876 PP

>> PHD_Oberon  PHD - plant homeodomain finger protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   7.9     5e-05     0.074      24      99 ..     214     279 ..     208     297 .. 0.82
   2 ?   -1.0   0.1         1   1.5e+03      83      98 ..     315     330 ..     306     339 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 5e-05
  PHD_Oberon  24 kgFCkeCsCviCskfddekdtsswikCeevvseediCghvcHldCalreekagtvkkggsikldvefyCraCdkks 99 
                  +F ++  Cv C++ +++ d  ++i C       ++C+ + H++C+  ++ +++   +++i+++  ++C +C+k s
  EPX74321.1 214 AKFTHTSLCVKCHHHESKGDDRKFIYC-------RTCTNTFHVECSGISTLTKMR--QAEISVE-GYSCSSCSKSS 279
                 6899999********************.......99*********8666655555..5555555.5******9987 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 1
  PHD_Oberon  83 sikldvefyCraCdkk 98 
                 s + dv f+C +C+++
  EPX74321.1 315 SYTKDVRFRCWRCRRV 330
                 56789********976 PP

>> zf-PHD-like  PHD/FYVE-zinc-finger like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   6.5    0.0022       3.4       1      34 [.     222     256 ..     222     280 .. 0.82
   2 ?    6.1   0.1    0.0053         8     113     144 ..     312     343 ..     303     363 .. 0.72

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0022
  zf-PHD-like   1 CdtCaesk.deekgqlvyCqGCslsyhkaClGkRs 34 
                  C  C++++ + +  +++yC  C++++h +C G  +
   EPX74321.1 222 CVKCHHHEsKGDDRKFIYCRTCTNTFHVECSGIST 256
                  889999886667789***************99754 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0053
  zf-PHD-like 113 elinnaenvlfRCaeCkrawhlehlpkkskks 144
                  +l+  +++v fRC +C+r +++    ++ ++ 
   EPX74321.1 312 RLVSYTKDVRFRCWRCRRVFYFFYYDQNPDTF 343
                  56788999***********9987766555554 PP

>> Peroxin-22  Peroxisomal biogenesis protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.2    0.0034       5.1      59      89 ..     658     694 ..     611     752 .. 0.77
   2 ?    1.4   0.2       0.2   2.9e+02      53      86 ..     750     855 ..     705     870 .. 0.60
   3 ?   -0.2   0.0       0.6     9e+02      31      59 ..     957     985 ..     952    1042 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0034
  Peroxin-22  59 e......yKiilcdssdglsavvkqLkpsslivdede 89 
                          ii+++s+d++++++k+++ +++i+de  
  EPX74321.1 658 FdsirthVLIISTSSVDSEISLLKKFRWQCMIIDEGQ 694
                 0344444679**********************88754 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.2
  Peroxin-22  53 evsskneyKiilcd.................................................................ssdglsavvkqLkpssli.. 84 
                 e+++ +e K+i+                                                                   s  +ls+++ qL++      
  EPX74321.1 750 EYEHIDEEKVIELHqmlkpfflrrvkeevlerlppkvevivpltmtplqkklyklivsknvdliqsivsksraksnsnsSRASLSNILMQLRKTLAHpy 848
                 555555555555444444444444444444444444444444444444444444444447777777777777777777777888888888887654444 PP

  Peroxin-22  85 .....vd 86 
                      v 
  EPX74321.1 849 lyspdVE 855
                 4444444 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.6
  Peroxin-22  31 ellsedvvlillPkvprddleeevsskne 59 
                 +l s d+v+il P+ +  +  + + ++++
  EPX74321.1 957 NLASADTVIILDPDFNPHQDMQAIARAHR 985
                 67799********9976665455555555 PP

>> PHD_4  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   5.9    0.0069        10       3      67 ..     218     275 ..     216     277 .. 0.77

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0069
       PHD_4   3 vtaaCivCgedgkedevveeesetpsslmeCsvCyeivHpeClkekegegvvned.lpnsWeCpkC 67 
                 +t+ C+ C++++++            +++ C  C+++ H eC   ++   + + +  ++ + C++C
  EPX74321.1 218 HTSLCVKCHHHESKG--------DDRKFIYCRTCTNTFHVECSGISTLTKMRQAEiSVEGYSCSSC 275
                 79999***9998887........357899*************998766665444414566777777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1391 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       718  (0.0400469); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.88u 0.29s 00:00:01.17 Elapsed: 00:00:00.47
# Mc/sec: 8827.55
//
Query:       EPX74322.1  [L=183]
Description: U1 snRNP-associated protein Usp103 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-22   78.6   1.3    3.6e-22   77.8   1.3    1.4  1  zf-U1     U1 zinc finger


Domain annotation for each model (and alignments):
>> zf-U1  U1 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.8   1.3     2e-26   3.6e-22       1      38 []       1      38 [.       1      38 [. 0.99

  Alignments for each domain:
  == domain 1  score: 77.8 bits;  conditional E-value: 2e-26
                XXSEEETTTTEEESS-SHHHHHHHHTSHHHHHHHHHHH CS
       zf-U1  1 mpkYyCdYCdiyLthDspsvRksHngGrkHkenvkdyy 38
                mpkY CdYC+++LthDs+svRk+Hn+Gr+H +nv+dyy
  EPX74322.1  1 MPKYLCDYCQVWLTHDSQSVRKAHNAGRAHLQNVQDYY 38
                9************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       773  (0.0431145); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1307.39
//
Query:       EPX74323.1  [L=312]
Description: zinc knuckle TRAMP complex subunit Air1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-11   44.0  24.8    3.9e-05   23.5   3.1    4.9  4  zf-CCHC     Zinc knuckle
  ------ inclusion threshold ------
      0.042   13.7  24.4       0.67    9.8   3.1    4.3  4  zf-CCHC_6   Zinc knuckle
       0.11   12.5   0.0       0.19   11.8   0.0    1.4  1  Sec61_beta  Sec61beta family


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   3.1   6.5e-09   3.9e-05       3      18 .]      91     106 ..      89     106 .. 0.94
   2 ?    3.3   0.8     0.017        99       3      17 ..     109     124 ..     108     125 .. 0.78
   3 !   13.7   0.2   8.6e-06     0.052       2      18 .]     128     144 ..     127     144 .. 0.91
   4 !   16.6   1.6     1e-06     0.006       3      17 ..     191     205 ..     189     206 .. 0.94

  Alignments for each domain:
  == domain 1  score: 23.5 bits;  conditional E-value: 6.5e-09
                 TSSSSSSSSTTTTSTS CS
     zf-CCHC   3 CynCGepGHiardCpk 18 
                 C+nC + GHia++Cp+
  EPX74323.1  91 CHNCKGFGHIAKECPH 106
                 ***************8 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.017
                 TSSSSSS.SSTTTTST CS
     zf-CCHC   3 CynCGep.GHiardCp 17 
                 C +CG +  Hi++ Cp
  EPX74323.1 109 CTTCGAIdDHISSRCP 124
                 8888886359999998 PP

  == domain 3  score: 13.7 bits;  conditional E-value: 8.6e-06
                 CTSSSSSSSSTTTTSTS CS
     zf-CCHC   2 kCynCGepGHiardCpk 18 
                  C nCG  GHia  Cp+
  EPX74323.1 128 RCINCGLLGHIAVRCPE 144
                 699************96 PP

  == domain 4  score: 16.6 bits;  conditional E-value: 1e-06
                 TSSSSSSSSTTTTST CS
     zf-CCHC   3 CynCGepGHiardCp 17 
                 CynC +  H+  dCp
  EPX74323.1 191 CYNCASGEHFGDDCP 205
                 **************9 PP

>> zf-CCHC_6  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   4.9   0.00024       1.4       4      20 ..      91     105 ..      89     108 .. 0.92
   2 ?    5.7   0.5    0.0022        13       4      20 ..     109     124 ..     106     128 .. 0.86
   3 ?    9.8   3.1   0.00011      0.67       3      26 ..     128     149 ..     125     161 .. 0.86
   4 ?   -1.5   0.5      0.38   2.3e+03      15      21 ..     162     168 ..     150     169 .. 0.69

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00024
   zf-CCHC_6   4 CknCGAFGHtarSkrCP 20 
                 C nC  FGH a  k CP
  EPX74323.1  91 CHNCKGFGHIA--KECP 105
                 ***********..9999 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0022
   zf-CCHC_6   4 CknCGAFGHtarSkrCP 20 
                 C  CGA+  +  S+rCP
  EPX74323.1 109 CTTCGAIDDHI-SSRCP 124
                 99*****9887.889*9 PP

  == domain 3  score: 9.8 bits;  conditional E-value: 0.00011
   zf-CCHC_6   3 KCknCGAFGHtarSkrCPmkcwng 26 
                 +C nCG +GH a   rCP  + +g
  EPX74323.1 128 RCINCGLLGHIA--VRCPESRRKG 149
                 8***********..9***776655 PP

  == domain 4  score: -1.5 bits;  conditional E-value: 0.38
   zf-CCHC_6  15 rSkrCPm 21 
                 +S +CP+
  EPX74323.1 162 TSGTCPL 168
                 5789996 PP

>> Sec61_beta  Sec61beta family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   3.2e-05      0.19       5      21 ..     169     185 ..     169     187 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.2e-05
                 XXXXXX----SS-B-TH CS
  Sec61_beta   5 LlryyeedapgikidPk 21 
                 ++ryy e ++g+++dP 
  EPX74323.1 169 IWRYYVESENGVRVDPN 185
                 68**************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (312 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1004  (0.0559987); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 2234.92
//
Query:       EPX74324.1  [L=660]
Description: acetolactate synthase catalytic subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.4e-53  178.9   0.2      5e-52  176.0   0.0    2.4  2  TPP_enzyme_N  Thiamine pyrophosphate enzyme, N-terminal TPP b
    8.6e-50  168.5   0.0      4e-48  163.1   0.0    2.6  2  TPP_enzyme_C  Thiamine pyrophosphate enzyme, C-terminal TPP b
    8.5e-44  148.6   0.0      5e-43  146.1   0.0    2.1  2  TPP_enzyme_M  Thiamine pyrophosphate enzyme, central domain
  ------ inclusion threshold ------
        0.1   12.4   0.0       0.22   11.3   0.0    1.5  1  CO_dh         CO dehydrogenase beta subunit/acetyl-CoA syntha
       0.11   11.3   0.0        0.2   10.4   0.0    1.4  1  XFP_N         XFP N-terminal domain


Domain annotation for each model (and alignments):
>> TPP_enzyme_N  Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  176.0   0.0   1.4e-55     5e-52       2     164 ..      79     240 ..      78     247 .. 0.98
   2 ?   -0.1   0.1      0.17   6.1e+02     103     146 ..     581     624 ..     464     633 .. 0.67

  Alignments for each domain:
  == domain 1  score: 176.0 bits;  conditional E-value: 1.4e-55
                   EHHHHHHHHHHHCT--EEEE---CCCHHHHCCHHCT.TSEEEE-SSHHHHHHHHHHHHHHHTS-EEEEE-CHHHHHHCHHHHHHHHHHT--EEEEEE CS
  TPP_enzyme_N   2 tvaealvraLkalgvehvfgvpGsrilplldalseeqgirvvlarhEqgaafaAdgyaratgkpgvvlvtsgpGatnaltalaeAkvdriPllvlsg 98 
                   t++e++ +++ +++v+hvfg+pG+ ilp++da+ +++ ++++l rhEqga++aA++y+r+t+ pgvvlvtsgpGatn++t +a+A  d++Pl+v+sg
    EPX74324.1  79 TGGEIFHDMMLKNNVKHVFGYPGGAILPVFDAIYRSPHFEFILPRHEQGAGHAAQAYSRVTRLPGVVLVTSGPGATNVVTPMADALMDGTPLVVFSG 175
                   89*********************************************************************************************** PP

                   E--CCCHHS..TC--T-CCHHHCCCSSEEEE-SSGGGHHHHHHHHHHHHHSSS--EEEEEEEHHHC CS
  TPP_enzyme_N  99 drptslrgqgvlqqeldqlalfrpvtkyaervtspeelpealrrAirtalsgrpgPvylelpkdvl 164
                   +++ts++g +++q e d  ++ r++tk+++ v++ ++lp+ +++A+++a+sgrpgPv+++lpkdv 
    EPX74324.1 176 QVATSSIGSDAFQ-EADMIGISRSCTKWNVMVKDIADLPRRIDEAFEIATSGRPGPVLVDLPKDVT 240
                   *************.**************************************************97 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.17
                   CCHHS..TC--T-CCHHHCCCSSEEEE-SSGGGHHHHHHHHHHH CS
  TPP_enzyme_N 103 slrgqgvlqqeldqlalfrpvtkyaervtspeelpealrrAirt 146
                   ++r  ++ q++ + ++l++++   a rv+++e+l++ +++ i+t
    EPX74324.1 581 EKRYSHTHQKNPNFTKLAESMGLKALRVEKKEDLASNMKEFIET 624
                   22225666666677777777777777777777777777766665 PP

>> TPP_enzyme_C  Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0     0.031   1.1e+02     107     152 ..     186     234 ..     172     235 .. 0.74
   2 !  163.1   0.0   1.1e-51     4e-48       1     153 []     485     632 ..     485     632 .. 0.99

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.031
                   BS----HHHHHHHTTSEEEEESSH.HHHHHHHHHHHH.....CSSSEEEEE CS
  TPP_enzyme_C 107 dlkpvdfaklaealGakgarvekadveeleealkeal.....ekkgpalie 152
                    +++ d+  + +++      v ++d+++l + ++ea+      + gp+l++
    EPX74324.1 186 AFQEADMIGISRSCTK--WNVMVKDIADLPRRIDEAFeiatsGRPGPVLVD 234
                   4777888888888833..356677789999999999988888899999997 PP

  == domain 2  score: 163.1 bits;  conditional E-value: 1.1e-51
                   ESSHHHHHHHHHHTTSSSSEEECETTTS-TTTHHHHHHHHHHHSTTSEEEEEEEHHHHHHTGGGHHHHHHTT-SEEEEEEE-SBCCCHHHHHHHHTC CS
  TPP_enzyme_C   1 diGcltlwaarllkvkrprsyltsgglgtmGyglpaAiGaklakpdrevvaivGDGgflmilqelatavrrnlpitvvvlnNegygmtggqqepfgg 97 
                   ++G +++waa +++ ++pr ++tsgglgtmGyglpaAiGa++a+pd  v+ i GD +f m+++elat+ ++++p+++++lnNe  gm+ ++q+ f++
    EPX74324.1 485 GVGAHQMWAATFYRWTKPRALVTSGGLGTMGYGLPAAIGASVANPDDIVIDIDGDASFSMTGMELATVRQHDIPVKILLLNNEEQGMVTQWQNLFYE 581
                   69*********************************************************************************************** PP

                   CTTTTSBB.BS----HHHHHHHTTSEEEEESSH.HHHHHHHHHHHHCSSSEEEEEE CS
  TPP_enzyme_C  98 krksgpagkdlkpvdfaklaealGakgarvekadveeleealkealekkgpaliev 153
                   kr+s+++   +k+++f klae++G k++rvek+  e+l+  +ke +e+kgp+l ev
    EPX74324.1 582 KRYSHTH---QKNPNFTKLAESMGLKALRVEKK--EDLASNMKEFIETKGPVLMEV 632
                   *****99...9999*******************..******************987 PP

>> TPP_enzyme_M  Thiamine pyrophosphate enzyme, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.28     1e+03      42      81 ..     155     193 ..     150     198 .. 0.81
   2 !  146.1   0.0   1.4e-46     5e-43       1     137 []     276     421 ..     276     421 .. 0.97

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.28
                   EEEEGGGTTSS-TTSTTEEEESGGGSCHHHHHHHHH-SEE CS
  TPP_enzyme_M  42 vvttlmgkgvipedhplylgmlglhgskaanealeeaDlv 81 
                    v t+m+  +++   pl + +  ++ s+ +++a++eaD +
    EPX74324.1 155 NVVTPMADALMD-GTPLVVFSGQVATSSIGSDAFQEADMI 193
                   577888877776.788888888888899999999999987 PP

  == domain 2  score: 146.1 bits;  conditional E-value: 1.4e-46
                   HHHHHHHHHH-SSEEEEE-CHHCHT.TGHHHHHHHHHHHT-EEEEEGGGTTSS-TTSTTEEEESGGGSCHHHHHHHHH-SEEEEES-SSSTCCCTTT CS
  TPP_enzyme_M   1 iekaaellkaakrpvilvGggvars.gaseelrelaeklgiPvvttlmgkgvipedhplylgmlglhgskaanealeeaDlvlalGarfddirttgs 96 
                   i+++  ll++ak+pvi++G+g+ ++ +a + lre++e+++iPv+t+l g g+++e+++l+l+mlg+hgs +an+a++eaD ++alGarfdd r+tg+
    EPX74324.1 276 IQRVSTLLQRAKKPVIFCGQGATYNsEAPKLLREFSERFQIPVTTSLLGLGAYDERSDLSLHMLGMHGSGYANMAMQEADMIIALGARFDD-RVTGN 371
                   78999******************9989****************************************************************.***** PP

                   TTTTTTT-E.........EEEEESSCCCCTTCC--SEEEECTHHHHHHHH CS
  TPP_enzyme_M  97 epefapeak.........iihididpaeigknyqvdlaivgdvketleaL 137
                      fapeak         iih+di+p++igk++q++ ai gd+ e+l+ L
    EPX74324.1 372 VALFAPEAKragaeerggIIHFDISPKNIGKVVQPTEAIEGDLFESLKLL 421
                   *******95599999999*************************9999865 PP

>> CO_dh  CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0     6e-05      0.22      21      54 ..     272     305 ..     260     338 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 6e-05
                 EE--SHHHHHHHHHSSSEEEEE-S--.-HH.HHH CS
       CO_dh  21 leealkvvakmikkakrPllivGpqvlkaeneea 54 
                 +e +++ v  ++++ak+P+++ G  + ++ +  +
  EPX74324.1 272 VEAKIQRVSTLLQRAKKPVIFCGQGATYNSEAPK 305
                 4556679*****************9988873333 PP

>> XFP_N  XFP N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   5.7e-05       0.2     140     234 ..     512     610 ..     500     639 .. 0.63

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 5.7e-05
       XFP_N 140 GelGyalshayGavldnPdlivacvvGdGe.aetGP.latswhsn...k..flnPaedGavlPilelnGykisnptilarisdeelkklfeGlGyepaf 231
                 G +Gy l  a+Ga + nPd iv+ + Gd   + tG  lat  +     k  +ln +e+G+v    +l      ++   +  ++ ++ kl e +G ++  
  EPX74324.1 512 GTMGYGLPAAIGASVANPDDIVIDIDGDASfSMTGMeLATVRQHDipvKilLLNNEEQGMVTQWQNLFYE---KRYSHTHQKNPNFTKLAESMGLKALR 607
                 789************************9863567752444433211222224666666666655554322...23333344555566666666666666 PP

       XFP_N 232 ved 234
                 ve+
  EPX74324.1 608 VEK 610
                 655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (660 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       570  (0.0317921); expected 358.6 (0.02)
Passed bias filter:                      537  (0.0299515); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.63u 0.25s 00:00:00.88 Elapsed: 00:00:00.42
# Mc/sec: 4759.63
//
Query:       EPX74325.1  [L=1151]
Description: nucleoporin Nup131 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.6e-31  107.2  16.2    1.5e-30  106.5  16.2    1.2  1  Nucleoporin_C  Non-repetitive/WGA-negative nucleoporin C-term
    1.9e-27   96.1   0.5      3e-27   95.5   0.5    1.3  1  Nucleoporin_N  Nup133 N terminal like


Domain annotation for each model (and alignments):
>> Nucleoporin_C  Non-repetitive/WGA-negative nucleoporin C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.5  16.2   1.7e-34   1.5e-30      65     574 ..     579    1051 ..     558    1098 .. 0.82

  Alignments for each domain:
  == domain 1  score: 106.5 bits;  conditional E-value: 1.7e-34
                     ...XXXXXXXX.......................................XXXXXXXXXXXXXXXX........XXXXXXXXXXXXXXXX.... CS
  Nucleoporin_C   65 ktllnsiieliklneeageeDaVRhwFihdvdrleiiiawaykvikdlksnsikealsflnvllEanevvlaaleeafefrkenaafygieeek 158 
                     +++l  i++ +       ++ ++ + F++   +++ ++  ++ + k  +s   +   ++l++l+  n+v+  ++ + + +r+e+  + +++++k
     EPX74325.1  579 SNILHLILQAM------VKSGNINDLFLNKSLNIKLLLYSLHTFYKHYASTENTFNFKLLQFLITVNNVFGLVFGNELAYRQEEV-IGNVDSTK 665 
                     55555555555......44446667788888899999999999998887777777888898888888888888888888887765.44554444 PP

                     ....XXXX.......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHHHHHHHHHHHHHH..HHHHHHHH CS
  Nucleoporin_C  159 led.ekwtstsvivenlerlldLtklllkdlfapnlssiinrnisrgesieleatllqeicgslcsltdvllfraiErlrwake..qkdkklqn 249 
                     ++  e w        +    +d ++lll++ ++++  ++  ++   g ++++++++l ++++++ +l +  +f   E  +   +  +   +  +
     EPX74325.1  666 ISIpELWNI------E----IDSVNLLLSQ-IEKS-IAVDRKKDFIGLKNDRNKKMLMKLQKQILHLIEHGCFLIHELTNSYTKpnSVPAAGAD 747 
                     432344542......2....2222222222.2222.222234556688899***************************9999997555566789 PP

                     HHXXXXXXXXX.........XXXHHHHHHHHHHHHTSXHHHHHHHHHHHHH..HHHXSSSSXHHHH......HHHHHHHSSSXXHHHHHHHHHH CS
  Nucleoporin_C  250 aikllekaydearkeqilkLlsigkleeaielaekledfralvellleianklasdkgederkelyekaeelekrielyfekfgkaFayalYdw 343 
                     + ++le++++ +r+e++  L++ig l++ai++ e ++d+++l+ ll+  +   ++++   ++               +y++ f ++Fa  l+++
     EPX74325.1  748 EYSSLEEHFRGRRREWLNYLAQIGYLKRAIKISEHVRDYPSLITLLNSCNF--ETPE---DK----------VSTQRHYLQIFKDDFAIVLFTH 826 
                     9*********************************************99885..2221...22..........223468**************** PP

                     HHHTTXGGGGGGX...XXTTHHHHHHHTXXHHHHHHTHHHHXXSHHHHHHHHHHHHSSSSXXXHHHHHHHHHHX---HHH.............. CS
  Nucleoporin_C  344 lisqgqqekLLdl.kedtsfilpFLrekpelakllWiydvkekdfeeAAeiLysLalskeqlvlskrieLSlakLaqLaeleesekekkglekk 436 
                     l+++gq   LL   ++++s++ +FL+ + +l +llW+y+++  +f +A++iL++  +   +++ ++ i   l+kL+ L +++    +++ ++kk
     EPX74325.1  827 LVETGQLHSLLHDfRSYESYLRKFLETN-KLYNLLWVYEAESGNFTHASDILLRGDVILKSKISEQNILFTLSKLFTLVNEKGY--DNNLVKKK 917 
                     ****************************.*************************9999999999999*************5555..444569** PP

                     ..HGGGHHHHHHHHHHHHHHHH.......................H-TT..S-HHHHHHHHHHHHHS---HHHHHHHTT.........TTTT-H CS
  Nucleoporin_C  437 lekieellevaaiQddllalilpsiegaidekaeveLamekfgkklderpalrqllkdelkklLkhkildasdLidlltLidtkeeeedplgef 530 
                     ++ i+ +  +++iQ +  +l  ++i  a +e++++ L++e+ + +l+e  +  + +++ l++lL ++  ++ + id +t      + e    ef
     EPX74325.1  918 MKEIDSNQRIVSIQREYAKLLDSTIVIAGNEEEAIVLLLEANCVSLHEASVRYRIVSNLLTRLLLKEHSPLVETIDFFTSF----SIENNYYEF 1007
                     *********************************************99998899999***********************22....334567778 PP

                     HHHHHHHHHTT---HHH............HHHHHHHHHHHHHHH CS
  Nucleoporin_C  531 elALkvlkvsdlrneeeealekliWRRcvIrddWeelnetkkke 574 
                      lA   l+ s+++ ++  +l  l  +R +++ +W+e ++ + + 
     EPX74325.1 1008 RLACDLLENSSFSTHQFVFLYLLLTQRFLLQLNWDETLRALTER 1051
                     89999************9999*************9998876554 PP

>> Nucleoporin_N  Nup133 N terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.5   0.5   3.3e-31     3e-27       1     432 [.      39     449 ..      39     451 .. 0.82

  Alignments for each domain:
  == domain 1  score: 95.5 bits;  conditional E-value: 3.3e-31
                    CE-SCEEEEEEE--HCHHHTTS--SS-EEEEEECTTTEEEEEETTEEEEEETTSSSS..............EEEEEE--.....--S---EEEEEE CS
  Nucleoporin_N   1 tetdfykvsklalPdelleelnhtesstkgglfpeigrawitvdnklflWnYnstassps...........tdtipydg.....eehtilavglLv 80 
                    t tdfy+v +l+ P++ +e +n+  + + g+++p ++r  i++ ++  l   n++   +s           +      g     +++++l+v  + 
     EPX74325.1  39 TSTDFYRVLQLSPPERCHEKANS--DFCEGYIDPYLRRFIIVDIKNWRLFISNDRY-CMSnaisydikrhlS------GfvdfeNDNEHLSVL-FR 124
                    579********99********98..9*************99988776666334443.333466663333333......3666669********.99 PP

                    ---SSSS-SSSCEEEEECTTSEEEEECECCS----.----EEEE.EEEE--EETT.TTEEEEEEETTTC-EEEEETTSSEEEEEEC-SSS-CEEEE CS
  Nucleoporin_N  81 kpkpgtfveevgllLvvattgeivyweviysaasl.lstnelsl.fntdlsvssdgeivtqvinseptgriflagstgrlyeltyrdssgwpslkc 174
                     +k +   +++g +L+ + tg+ +ywe+i    +l  + n +++ ++ +l+++++ e+++ ++   p+g  +++++ gr + +  r+ + + sl++
     EPX74325.1 125 FVKRNFTCDDPGFVLLFPSTGDMFYWEDINYI-RLvHELNGSKGfVHIKLPLLTK-EKCIGLTMIPPAG-SVVSTTAGRFFNIYPRNDNQRLSLVY 217
                    999999999***********************.6676666666515899*****9.*************.************************** PP

                    EEEEE-SSSS-...--SSS--G----GG-EEEEEEECCT....CEEEEEETTSEEEEEEEETTCEE-EEEEEEEHHHHHHHH.HHSCHTTTCGCTT CS
  Nucleoporin_N 175 kkicltkgglssllsilpgvlsgasereeivqlridssr....rilytlsskgvirvydlsasngesslksdidirqilleaitesliasaplask 266
                    + + l+ +++     i  ++ ++ s ++++v++r++s++    ri+y l s   i ++++s + g s l ++++ir+ ++++     ++ + +  +
     EPX74325.1 218 RMLPLSGSLIN----IQCSISKITSYPSHVVAIRAGSIKskyeRIVYGLFSNADIYIWEIS-RKGCSQLLQKKNIRNLIIQR-----FRLDGDCVN 303
                    *9999999986....6666666677************************************.99******************.....********* PP

                    T-EEEEEEES-TTTSSCEEEEEEECSSSEEEEEEEEEEEECTTT-EEEEEEEEEEEEECCCCCSSSSSSSBECC-CCSSETTCEEEEEEES--SEE CS
  Nucleoporin_N 267 slkildispvsaeessllhlvaitsngvrlylllsssssdspsalslvsvrfppkrlntysskllenkkksklllpskiispgiflfvvfdkssav 362
                    +l++ld+s ++++++sl++l+a+ +n    y++ +s+s+++++   +    f+   +++y s + +     +++ p     p +++++vfd  s  
     EPX74325.1 304 ELEFLDLSICKSDPYSLVCLIAWNENAPTKYYAIASVSFNNEML--PTISGFHK--VCSYHSLVDSIS--ARIFCPA----PCTVIYCVFD--SLP 387
                    *************************************9999965..45555555..666766666666..*******....**********..888 PP

                    EEEEEEE-TTTTSSSESEEEECCS--SE-EEEEE--T--T--CCCCCCSSTTCTTTTS---EEEETTTEE CS
  Nucleoporin_N 363 vlvslpdtgilkksqlvedasflpldgkwediislrksfdatilpsgyenesatqykeParvalltntGv 432
                    v+v++         + +e ++f++ + ++   ++  +++d +++    e+        Pa  +l++++Gv
     EPX74325.1 388 VIVCN--------FKGRETNEFVEESLFISNSYKQFQVMDIASVDAVLEDTNTLMLEFPAIALLTKGNGV 449
                    88888........236666666666666666665555566666666555554333355555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1151 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       532  (0.0296726); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.70u 0.26s 00:00:00.96 Elapsed: 00:00:00.42
# Mc/sec: 8178.97
//
Query:       EPX74326.1  [L=437]
Description: CK1/CK1/CK1-G protein kinase Cki2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.2e-27   94.6   0.0    8.5e-27   94.2   0.0    1.2  1  Pkinase         Protein kinase domain
    2.7e-11   43.3   0.0    3.4e-11   42.9   0.0    1.1  1  Pkinase_Tyr     Protein tyrosine kinase
    3.5e-07   29.4   0.5    5.4e-07   28.7   0.0    1.5  2  Pkinase_fungal  Fungal protein kinase
     0.0021   18.0   0.0      0.022   14.7   0.0    2.1  2  APH             Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.2   0.0   1.9e-30   8.5e-27       1     216 [.      12     236 ..      12     270 .. 0.85

  Alignments for each domain:
  == domain 1  score: 94.2 bits;  conditional E-value: 1.9e-30
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS.CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHH.HHSS--H CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklk.hpnivrlyevfeekdelylvleyveggeladlle.rkgslse 97 
                 y++ +k+GeGsfG+++ +++  +++ vA+K   k+++      +++ E +  k l  +  i  +y++ +e  + +lv +++   +l+dl e    ++s 
  EPX74326.1  12 YRVGRKIGEGSFGVIFDGKNLLNNQLVAIKFEPKKSEAP----QLRDEYRTYKLLVgSVGIPSVYYFGQEGLHNILVIDLLG-PSLEDLFEwCGCKFSV 105
                 67899**************************99988877....5689******9998999********************98.5599999965667*** PP

                 HHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEET...TTE...EEE-SGTTSEESSSSCS........BCTTTSCGGGS-HHHHTTSCBSHHHHHHH CS
     Pkinase  98 eeakkiakqilegleylHskgiiHrDlKpeNiLide...kge...lKitDFGlakelesssk........ltsfvgtseYlAPEvlkeneyskkvDvWs 182
                 +++  iakq+l  ++ +H+k++++rD+Kp+N+Li +   + +   + ++DFG+ak ++  ++         +s  gt +Y++     ++e s+  D+ s
  EPX74326.1 106 KTVAMIAKQMLDRVQTIHKKNLVYRDIKPDNFLIGRpctR-NtnlVYVVDFGMAKYYRDPKTkqhipyseRKSLSGTARYMSINTHLGREQSRRDDLES 203
                 **********************************954441.1456*************999899*****99***********999999999******** PP

                 HHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHH CS
     Pkinase 183 lGvilyelltgkppfsgekgkekvekeldqleki 216
                 lG +++ +l g+ p++g k  + ++++++++ + 
  EPX74326.1 204 LGHVFMYFLRGSLPWQGLKAAN-NKHKYEKISEK 236
                 ****************665544.33333332222 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.9   0.0   7.6e-15   3.4e-11       3     251 ..      14     270 ..      12     278 .. 0.79

  Alignments for each domain:
  == domain 1  score: 42.9 bits;  conditional E-value: 7.6e-15
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS.-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkkl.khpnivkllgvctkeepllivteyvkgGdLlkfLrkkekek 99 
                  +g+k+GeG+fG ++ g+       +++ Va+K   +++++    +l +e+++ k l     i +++ +  ++ + ++v++++ g +L++  +     k
   EPX74326.1  14 VGRKIGEGSFGVIFDGKNL----LNNQLVAIKFEPKKSEAP---QLRDEYRTYKLLvGSVGIPSVYYFGQEGLHNILVIDLL-GPSLEDLFEWC-GCK 102
                  689*************999....88999****997666666...67777777777778888999999999999999999997.46999999998.*** PP

                  SBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE.....TTEEEE-STTTHEETTTSSEE.....EETTSSTSGGGGS-HHHHHHSEEEHHHH CS
  Pkinase_Tyr 100 ltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse.....nkvvkisDfGLardiekddey.....vkkeeaklpvkWmapEslkekkftsksD 187
                  +++k++  +a q+ + ++ +++k+lv rd+   N L+ +     +++v + DfG+a+   + ++      +++++     ++m++ +   ++ + + D
   EPX74326.1 103 FSVKTVAMIAKQMLDRVQTIHKKNLVYRDIKPDNFLIGRpctrnTNLVYVVDFGMAKYYRDPKTKqhipySERKSLSGTARYMSINTHLGREQSRRDD 200
                  *************************************988888799**********9884333222344488889999******************** PP

                  HHHHHHHHHHHHTTSSGTTTTS...HHHHHHHHHHTTEE.S-BBTTS...BHHHHHHHHHHT-SSGGGS-- CS
  Pkinase_Tyr 188 vWsfGvllwEiftlgespypgl...kneevleklkegkr.lekpekc...peelyelmkkcweedpeeRpt 251
                    s G + +  +  g+ p++gl   +n++ +ek++e+k+  + +e c   p+e+++ m+   + + +e p+
   EPX74326.1 201 LESLGHVFMYFLR-GSLPWQGLkaaNNKHKYEKISEKKQaTSINELCkgfPNEFNKYMTYVRSLQFDEDPD 270
                  *****88776555.****99984334566777885555513333333222566666666666665555555 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.7   0.0   1.2e-10   5.4e-07     322     406 ..     122     210 ..     111     212 .. 0.90
   2 ?   -3.3   0.3      0.65   2.9e+03     219     225 ..     349     355 ..     317     408 .. 0.44

  Alignments for each domain:
  == domain 1  score: 28.7 bits;  conditional E-value: 1.2e-10
  Pkinase_fungal 322 LflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddsses.....garertGTleFmaievlkgeeHsyrhDLESffyvllw 406
                      + k++++ rDi  +N li  + + +++   ++D+ +ak + d+++++     +++   GT+ +m+i+   g e s r+DLES+  v+++
      EPX74326.1 122 IH-KKNLVYRDIKPDNFLIGRPCTRNTNLVYVVDFGMAKYYRDPKTKQhipysERKSLSGTARYMSINTHLGREQSRRDDLESLGHVFMY 210
                     56.999**************999999****************988888666655599***************************999998 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 0.65
  Pkinase_fungal 219 aeiRkgl 225
                     +  ++gl
      EPX74326.1 349 SAYKSGL 355
                     1111111 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0     0.093   4.2e+02      25      69 ..      40      83 ..      33     100 .. 0.79
   2 !   14.7   0.0     5e-06     0.022     165     198 ..     124     160 ..     106     161 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.093
                EEEE-TTS-HHHHHHHHHHHHHHHHTT-B--B-CTTBS-EEETTE CS
         APH 25 lrrnpparaaeeirrevallrlLakagvpvPevlagdtddeeigl 69
                 ++ p++ +a+++r+e++ ++lL ++ v +P v+++++ + ++ l
  EPX74326.1 40 IKFEPKKSEAPQLRDEYRTYKLLVGS-VGIPSVYYFGQEGLHNIL 83
                566677789*************9998.668999998877776665 PP

  == domain 2  score: 14.7 bits;  conditional E-value: 5e-06
                 -EEEE-SS-SGGGEEEC.....TTEEEEE---TT-EE CS
         APH 165 ptvllHgDlhpgNllvd...pddgrvtGviDfedagl 198
                 ++ l+ +D++p+N+l+     +++ +++v+Df++a++
  EPX74326.1 124 KKNLVYRDIKPDNFLIGrpcTRNTNLVYVVDFGMAKY 160
                 566999**************9999999********87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (437 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       691  (0.0385409); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 3053.75
//
Query:       EPX74327.1  [L=224]
Description: hypothetical protein SOCG_03537 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       757  (0.0422221); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.44
# Mc/sec: 1543.77
//
Query:       EPX74328.1  [L=207]
Description: proteasome interacting protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-35  121.7   0.0    3.5e-35  121.5   0.0    1.1  1  PITH      PITH domain
  ------ inclusion threshold ------
      0.038   13.6   0.0      0.053   13.1   0.0    1.2  1  DUF3153   Protein of unknown function (DUF3153)


Domain annotation for each model (and alignments):
>> PITH  PITH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.5   0.0   3.9e-39   3.5e-35       1     151 [.      24     171 ..      24     172 .. 0.90

  Alignments for each domain:
  == domain 1  score: 121.5 bits;  conditional E-value: 3.9e-39
        PITH   1 LyqyIdlkkveclNeseegsvkkvlkksweerldekkyleSdaDeqLlihipFtqsvklksllikstkkeeeesaPktiklfkNrkkkldFdda.s.ep 97 
                 Ly++Id + + +lNe+e++++k+v+ k+w++r d++ ++eSd+D+qLl+hipFt+s  l+sll+++     ++saP ++ l+ Nr+  ldF  + + +p
  EPX74328.1  24 LYTCIDKDAIVTLNEAEQDTGKQVF-KPWDQRFDDSVIVESDVDDQLLFHIPFTGSATLRSLLVRIFP---DSSAPHSVSLYPNRS-DLDFTAVqDsKP 117
                 899**********************.9******99889***************************965...89***********85.55*****55569 PP

        PITH  98 tqeiels.eedeeketvelplrfvkfqnvssLtlffednnegedvtridyiglkG 151
                 t+++e+  +  + +++ e+p+++  +qn ++L+lff+ n++++d  +i yigl+G
  EPX74328.1 118 TESFEFPlSF-SGNQIFEFPVKTRLYQNLRNLNLFFSRNDGSDDPIQIAYIGLRG 171
                 9999965222.234466*********************9999************9 PP

>> DUF3153  Protein of unknown function (DUF3153)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   5.9e-06     0.053      10      80 ..      33      99 ..      23     126 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 5.9e-06
     DUF3153 10 rlkleqelssasgeql.pwqeeleqrlaelggkveerdeeelrltipflngeeleellnrlvsraseaagls 80
                +++l+   + ++++ + pw ++++  +      ve+  +++l + ipf  +++l++ll r+++  s++  +s
  EPX74328.1 33 IVTLNEAEQDTGKQVFkPWDQRFDDSV-----IVESDVDDQLLFHIPFTGSATLRSLLVRIFPDSSAPHSVS 99
                677777777777777899999998766.....4555557899*********************888765555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       330  (0.0184059); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1499.68
//
Query:       EPX74329.1  [L=328]
Description: shugoshin Sgo1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.5e-09   36.4   9.4    7.9e-09   35.3   9.4    1.7  1  Shugoshin_N  Shugoshin N-terminal coiled-coil region
    3.1e-05   23.7   2.3    3.1e-05   23.7   2.3    2.1  2  Shugoshin_C  Shugoshin C terminus
  ------ inclusion threshold ------
       0.24   11.3   6.1       0.52   10.2   4.8    2.2  2  GIT_CC       GIT coiled-coil Rho guanine nucleotide exchange 
       0.64    8.6   7.5       0.13   10.9   1.9    1.9  2  FapA         Flagellar Assembly Protein A


Domain annotation for each model (and alignments):
>> Shugoshin_N  Shugoshin N-terminal coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   9.4   1.8e-12   7.9e-09       1      43 [.      21      63 ..      21      65 .. 0.95

  Alignments for each domain:
  == domain 1  score: 35.3 bits;  conditional E-value: 1.8e-12
  Shugoshin_N  1 lKrkylrqNreLAKsNsalslkirelekevseLlsENlnLRel 43
                 lK+++l+qNre+++ N +ls+k+++ e e+++Ll+ N +L+ +
   EPX74329.1 21 LKKRFLKQNREIIRVNTQLSAKLSQSEIEMEKLLQDNCQLKNN 63
                 79*************************************9976 PP

>> Shugoshin_C  Shugoshin C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   2.3     7e-09   3.1e-05       3      24 ..     287     308 ..     285     308 .. 0.90
   2 ?   -3.9   1.8         3   1.3e+04       3       8 ..     318     323 ..     318     324 .. 0.73

  Alignments for each domain:
  == domain 1  score: 23.7 bits;  conditional E-value: 7e-09
  Shugoshin_C   3 psRrarkvvsYKEPSLnsKMRR 24 
                  ++Rra k+v+Y+ P L+ K+RR
   EPX74329.1 287 RRRRAVKSVNYAIPDLRMKLRR 308
                  577778***************9 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 3
  Shugoshin_C   3 psRrar 8  
                  ++R++r
   EPX74329.1 318 RRRQCR 323
                  588887 PP

>> GIT_CC  GIT coiled-coil Rho guanine nucleotide exchange factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   1.4    0.0006       2.7      34      64 ..      31      61 ..      27      62 .. 0.77
   2 ?   10.2   4.8   0.00012      0.52      23      60 ..      41      78 ..      37      84 .. 0.86

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0006
      GIT_CC 34 qLlkvNtslsdelrlLQskvqkLqaeNaqlr 64
                ++++vNt+ls +l++   +++kL ++N ql+
  EPX74329.1 31 EIIRVNTQLSAKLSQSEIEMEKLLQDNCQLK 61
                5678888888888888888888888888876 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00012
      GIT_CC 23 kalaaseakiqqLlkvNtslsdelrlLQskvqkLqaeN 60
                 +l+ se  +++Ll+ N++l+++l +L s vq   + +
  EPX74329.1 41 AKLSQSEIEMEKLLQDNCQLKNNLIKLESRVQMYSQSE 78
                69****************************99766655 PP

>> FapA  Flagellar Assembly Protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   1.9   2.9e-05      0.13     329     411 ..      34     112 ..      23     144 .. 0.78
   2 ?    0.6   0.3     0.038   1.7e+02     360     428 ..     196     257 ..     177     263 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 2.9e-05
        FapA 329 gldepelkeklkeleeeleeleeeleklkkkikklpklkaekqlesekkeqlkklletkeklkeeleeleeelkelkeelesk 411
                  ++  +l +kl++ e e+e+l +   +lk++++kl++   + q+ s+ ++ + ++ ++ +k++++l+e+++ + e++e++   
  EPX74329.1  34 RVN-TQLSAKLSQSEIEMEKLLQDNCQLKNNLIKLES---RVQMYSQSESLYRQYFQDFQKIRNKLSEVHHLMMEIDERILPP 112
                 566.778888888888888998888899999888888...8899999******************************999877 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.038
        FapA 360 ikklpklkaekqlesekkeqlkklletkeklkeeleeleeelkelkeeleskkeeakikvnkeiypgvk 428
                 +kk++        + +  e++++ +e+ ++++++ ++    ++ +ke+++sk ++ ++ + ++++++v+
  EPX74329.1 196 LKKMK-------PPTHDIESMNNSKESEKEFSQNETKFPLGKEVMKEQVNSKPSNVRVCIPSKAFDSVT 257
                 22222.......256778899999999999999999999999999999999966669999888888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1613  (0.089966); expected 358.6 (0.02)
Passed bias filter:                      590  (0.0329076); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.62u 0.29s 00:00:00.90 Elapsed: 00:00:00.49
# Mc/sec: 2011.93
//
Query:       EPX74330.1  [L=94]
Description: extender-the chronological lifespan protein Ecl2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00014   23.1   8.3    0.00016   22.9   8.3    1.0  1  Ecl1      ECL1/2/3 zinc binding proteins


Domain annotation for each model (and alignments):
>> Ecl1  ECL1/2/3 zinc binding proteins
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   8.3   9.1e-09   0.00016       4      74 ..       2      71 ..       1      83 [. 0.67

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 9.1e-09
        Ecl1  4 flqfCamCEkqivpsnsiLYCSEaCRrkD....sekslssssssssspplsprsssapseprdsavpsrpsfsri 74
                +l++C+ C   +      LYCS +C ++D     ++s ++ +s+ +s  + ++++ ++ ++r s++ps++ +s+ 
  EPX74330.1  2 DLDYCLICGMPT---TGNLYCSRECHLQDcpgcDSQSEQCAYSHAASLHMLSSQYLDHFRRR-SSMPSPS-TSSL 71
                69******9666...999*************9955555555555555555555455555443.6777776.4444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       684  (0.0381505); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.42
# Mc/sec: 679.00
//
Query:       EPX74331.1  [L=565]
Description: dynein intermediate chain Dic1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-13   50.5   5.0       0.02   15.8   0.1    7.2  7  WD40        WD domain, G-beta repeat
  ------ inclusion threshold ------
      0.067   13.1   1.6       0.83    9.6   1.4    2.5  2  SpoOE-like  Spo0E like sporulation regulatory protein


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0      0.02   1.8e+02      13      38 .]     222     256 ..     207     256 .. 0.64
   2 !   10.2   0.0   0.00013       1.1       8      38 .]     268     299 ..     262     299 .. 0.77
   3 !   15.8   0.1   2.2e-06      0.02       8      38 .]     315     348 ..     309     348 .. 0.84
   4 ?    0.6   0.0      0.13   1.2e+03      22      36 ..     384     397 ..     371     397 .. 0.67
   5 !   12.2   0.0   2.9e-05      0.26       4      38 .]     413     458 ..     410     458 .. 0.76
   6 ?    0.4   0.1      0.16   1.4e+03       2      20 ..     479     497 ..     478     516 .. 0.72
   7 ?    1.1   0.0     0.097   8.7e+02      13      36 ..     536     560 ..     519     562 .. 0.74

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.02
                 EEEEE..EETTSSEEEE.....E...ETTSEEEEEE CS
        WD40  13 vtsla..fspdgawlas.....G...sdDgtvriWd 38 
                 ++sl+     d  +las     G   s Dg v +W+
  EPX74331.1 222 INSLDysHFFDELLLASysnpvGgqrS-DGLVLVWN 256
                 888865333333335556666642444.*******8 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00013
                 ESSSSEEEEEEETTSSEEEEEE.TTSEEEEEE CS
        WD40   8 tGHssvtslafspdgawlasGs.dDgtvriWd 38 
                 ++ s +t  +fsp+++ +++G+ ++g + +Wd
  EPX74331.1 268 KANSEITISKFSPSNPHIVAGGaYNGQLFLWD 299
                 55545644459********99647*******9 PP

  == domain 3  score: 15.8 bits;  conditional E-value: 2.2e-06
                 ESS.SSEEEEE..EETTSSEEEEEETTSEEEEEE CS
        WD40   8 tGH.ssvtsla..fspdgawlasGsdDgtvriWd 38 
                  GH  ++++la  +s +   ++++s Dg  +iWd
  EPX74331.1 315 GGHiEPINDLAfmNSFSTENIVTCSTDGYMHIWD 348
                 5*********9887777777999999*******9 PP

  == domain 4  score: 0.6 bits;  conditional E-value: 0.13
                 SSEEEEEETTSEEEE CS
        WD40  22 gawlasGsdDgtvri 36 
                 +a++  G +Dg +ri
  EPX74331.1 384 NAFV-IGAEDGRLRI 397
                 3445.5*99****98 PP

  == domain 5  score: 12.2 bits;  conditional E-value: 2.9e-05
                 EEEEESSSS.EEEEE..........EETTSSE.EEEEETTSEEEEEE CS
        WD40   4 lrtltGHss.vtsla..........fspdgaw.lasGsdDgtvriWd 38 
                  ++l+GHs  vt+l+            ++ ++ l s+s D tv++W+
  EPX74331.1 413 FKSLEGHSAyVTGLDvmrasidiepLKKSENYyL-SSSLDWTVKLWS 458
                 68999**445****99999999999444445525.6788*******5 PP

  == domain 6  score: 0.4 bits;  conditional E-value: 0.16
                 EEEEEEESSSS.EEEEEEET CS
        WD40   2 qclrtltGHss.vtslafsp 20 
                 +c+r+++ H++ v +++++p
  EPX74331.1 479 TCVREFD-HQDmVFDVKWNP 497
                 5888885.756799998777 PP

  == domain 7  score: 1.1 bits;  conditional E-value: 0.097
                 EEEEEEETTSSE.EEEEETTSEEEE CS
        WD40  13 vtslafspdgaw.lasGsdDgtvri 36 
                  + +a++p ++  la+G+  g++ +
  EPX74331.1 536 LNRIAWQPKSNQhLACGGLGGSLFL 560
                 5789999999994466776666655 PP

>> SpoOE-like  Spo0E like sporulation regulatory protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   1.4   9.2e-05      0.83       2      21 ..       5      25 ..       5      29 .. 0.78
   2 ?    0.5   0.0     0.064   5.8e+02      13      30 ..     322     339 ..     320     341 .. 0.92

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 9.2e-05
                HHHHHHHHHHHHHH.HHHCC- CS
  SpoOE-like  2 lkeIEelRkeLnel.aekkgl 21
                ++eIEe+R++L +l +ek+++
  EPX74331.1  5 KREIEEKREKLLKLrQEKQSF 25
                68************4444465 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.064
                 HHHHHHCC--HHHHHHHH CS
  SpoOE-like  13 nelaekkgltdpeVlelS 30 
                 n+la  ++++ + ++++S
  EPX74331.1 322 NDLAFMNSFSTENIVTCS 339
                 789999***********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (565 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       589  (0.0328518); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.44
# Mc/sec: 3817.65
//
Query:       EPX74332.1  [L=244]
Description: 20S proteasome component alpha 1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      6e-47  159.6   0.1    7.9e-47  159.2   0.1    1.1  1  Proteasome      Proteasome subunit
    3.8e-14   52.1   0.1      6e-14   51.4   0.1    1.3  1  Proteasome_A_N  Proteasome subunit A N-terminal signature
  ------ inclusion threshold ------
       0.13   12.0   0.0       0.54   10.1   0.0    2.0  2  LexA_DNA_bind   LexA DNA binding domain
       0.14   12.5   0.0       0.41   11.0   0.0    1.7  1  HTH_WhiA        WhiA C-terminal HTH domain


Domain annotation for each model (and alignments):
>> Proteasome  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.2   0.1   1.8e-50   7.9e-47       4     190 .]      34     219 ..      32     219 .. 0.97

  Alignments for each domain:
  == domain 1  score: 159.2 bits;  conditional E-value: 1.8e-50
                 S-EEEEEEETTEEEEEEEEEEEETTEEEESSSSTSEEEEETTEEEEEEESHHHHHHHHHHHHHHHHHHHHHHSSGTCHHHHHHHHHHHHHHHHHHCTTT CS
  Proteasome   4 GttvvGikgkdgvvlaadkratagskllskstveKifkiddhigvafaGlaaDartlvrraraeaqlyrlrygrpipverlvarvaaklqaytqrsgrr 102
                 G t+vGi+g++  +++++k+++  +kl++ stv+ +f i++ ig++++G++aDar+ v+rar+ea+++++++g+p+p+++l++r+a+ +q+ tqr+++r
  EPX74332.1  34 GITSVGITGQNSGCVISQKKIP--DKLIDASTVNYVFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQRASMR 130
                 78********************..*************************************************************************** PP

                 TTSEEEEEEEEETTTEEEEEEEETTSEEEEESSEEEESTTHHHHHHHHHHHHSTT...BSHHHHHHHHHHHHHHHHHHBTTSCSSEEEEEE CS
  Proteasome 103 pfgvslliagvdeeggpeLyqidpsGsyieekdavaiGsgseaaktalekeyked...ltleeavelavkalkealerdklsgknievavi 190
                 p+gv++ +++vd+e gp+Ly++dp+G yi++k a+++G+++++ +++lek+yk++    +l e+ve+ +++l ++l  d ++ ++++++v+
  EPX74332.1 131 PLGVAMTLVSVDDELGPSLYKLDPAGFYIGYK-ATSAGTKQTETMNWLEKRYKKNgvpPNLAETVETGIQSLMSSLSTD-FKATELQIGVV 219
                 *******************************8.*****99************998666799****************77.99999999986 PP

>> Proteasome_A_N  Proteasome subunit A N-terminal signature
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.4   0.1   1.3e-17     6e-14       1      23 []       7      29 ..       7      29 .. 0.98

  Alignments for each domain:
  == domain 1  score: 51.4 bits;  conditional E-value: 1.3e-17
  Proteasome_A_N  1 YDrslttFSPdGRLfQVEYAmkA 23
                    +Dr++t+FSP+GRLfQVEYA+kA
      EPX74332.1  7 FDRTITVFSPEGRLFQVEYAFKA 29
                    7*********************9 PP

>> LexA_DNA_bind  LexA DNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00012      0.54       7      32 ..     169     194 ..     164     207 .. 0.87
   2 ?   -1.7   0.0      0.55   2.5e+03      35      53 ..     225     243 ..     218     243 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00012
                    HHHHHHHHHHHHHHHHSS---HHHHH CS
  LexA_DNA_bind   7 rQrevldlikasieetgypPsireia 32 
                    +Q e ++++++  +++g pP  +e  
     EPX74332.1 169 KQTETMNWLEKRYKKNGVPPNLAETV 194
                    79********************9965 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.55
                    HTS-.HHHHHHHHHHHHHT CS
  LexA_DNA_bind  35 lglkSpsaveehLkaLerK 53 
                    ++l S   +  hL+  + K
     EPX74332.1 225 FRLLSVDEIDAHLQSIAEK 243
                    6788999999999998877 PP

>> HTH_WhiA  WhiA C-terminal HTH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   9.1e-05      0.41      14      58 ..     162     206 ..     161     212 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 9.1e-05
                 HHHHHHHHHHHHHHHHHHHT-GGGS-HHHHHHHHHHHH-TTS-HH CS
    HTH_WhiA  14 KtvkaaakqieaielieekkgleklpeklkevaelRlenpdaSLk 58 
                 K+++a++kq+e ++ +e++++ + +p++l e++e+ ++   +SL+
  EPX74332.1 162 KATSAGTKQTETMNWLEKRYKKNGVPPNLAETVETGIQSLMSSLS 206
                 8899*****************************998888888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       477  (0.0266049); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.41u 0.30s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1755.60
//
Query:       EPX74333.1  [L=360]
Description: Pex16 family peroxisome import protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.6e-40  138.1   3.5      4e-40  137.9   3.5    1.0  1  Pex16     Peroxisomal membrane protein (Pex16)
  ------ inclusion threshold ------
      0.035   14.1   0.2        1.4    9.0   0.6    2.3  2  FAS_N     N-terminal domain in fatty acid synthase subunit be


Domain annotation for each model (and alignments):
>> Pex16  Peroxisomal membrane protein (Pex16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.9   3.5   4.5e-44     4e-40       3     312 ..       7     344 ..       5     357 .. 0.85

  Alignments for each domain:
  == domain 1  score: 137.9 bits;  conditional E-value: 4.5e-44
       Pex16   3 Yekfvlkna...sqvsqiEstlrsltyilpgrfrdaeiasEalysllnLlslyhDslLeravks........ppseharytrawtkksklyrrvalvLq 90 
                 Yek +l+++   ++vs+iE++l++l y+lp  fr +e+ s++++++l Ll+ +h +lL+r++++         +se + + +++ ++s++ +  + +L 
  EPX74333.1   7 YEKHILADErsfTRVSEIEKILKYLAYFLPAEFRTNELSSQTISCVLLLLQQFHTNLLYRKISElpeheqtlLKSERTLFIEHFNHRSSFFQTSSQLLF 105
                 666666444111689*********************************************99779***999977999********************** PP

       Pex16  91 vveytelllEmaakrklGekgrWrvvvlieaiKavlRllLlrltksrpllspplperevdpeeleeeee.....kkewtlkrtgrvlpslassgdissy 184
                 +++ + l +E++ +++   + ++++v+ +e +K +lRl L++ t++ +  + pl+ r++++++  +  +     ++ +tlk+tg+ +p l s  +  ++
  EPX74333.1 106 LLDNLSLPAEILTAKL-YPSYQYDTVLSVESLKLLLRLHLMYQTGGYLPFKNPLLTRDFNAKDFINIYAtykdpNNYITLKKTGKRVPRLHSVPSSFQQ 203
                 ****************.788*************************9999999999999544433332224445599**************999989999 PP

       Pex16 185 llskvltaddikpptkllrrlkgsaqlAEvlyilrPlvyvlalrrygrr..........swkPwllslalellsrqlrklrtkkkkslsalereelsrR 273
                 l +++ + +++  +++  ++l     ++++l ++rP+vy+l+  +++r+           w Pw+l l++e++s  l + +++k++++ +   e +s++
  EPX74333.1 204 LNQSTPKLHNLLLQSSSFHPLGLLRIISNILRVFRPFVYMLLTWHWKRTqlsgnssrkrPWFPWILTLLMEIASNYLNSKDRNKSSKSLPMRVEAWSNQ 302
                 ********************************************999998888888888999*****************44444455555555556555 PP

       Pex16 274 k..lallwyll.Rgpfyekvtkpkleglakrlesvpllglvg 312
                 +  ++ l + l  g f++++t+++l+  ++++e +p++g + 
  EPX74333.1 303 SafRDYLTWSLtHGRFFDEFTRQWLKCAVRWVEPIPFVGRFL 344
                 4115666665527*********************99996443 PP

>> FAS_N  N-terminal domain in fatty acid synthase subunit beta
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.6   0.00015       1.4      48      95 ..      18      65 ..       7      85 .. 0.87
   2 ?    2.2   0.0     0.019   1.7e+02      80     110 ..     266     296 ..     247     312 .. 0.73

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00015
       FAS_N 48 eeplseieLlakFLgyvaksiestesstsqfedvlklvleefessyLk 95
                 + +seie + k+L y    +  t++ +sq+ +++ l+l++f+++ L 
  EPX74333.1 18 FTRVSEIEKILKYLAYFLPAEFRTNELSSQTISCVLLLLQQFHTNLLY 65
                56799************9988888899*****************9983 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.019
       FAS_N  80 dvlklvleefessyLkkndihalvsnLpset 110
                 + + ++l e+ s+yL+++d     ++Lp+  
  EPX74333.1 266 PWILTLLMEIASNYLNSKDRNKSSKSLPMRV 296
                 5677899**********99888888887654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       465  (0.0259356); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2794.93
//
Query:       EPX74334.1  [L=458]
Description: origin recognition complex subunit Orc5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      3e-69  233.7   0.1    3.7e-69  233.4   0.1    1.1  1  ORC5_C    Origin recognition complex (ORC) subunit 5 C-termin
    6.6e-09   36.4   0.0    3.7e-08   33.9   0.0    2.0  1  AAA_16    AAA ATPase domain
    7.7e-05   23.0   0.3    0.00031   21.0   0.1    2.0  2  AAA_22    AAA domain
     0.0024   17.9   0.1     0.0073   16.3   0.1    1.8  1  AAA_14    AAA domain
  ------ inclusion threshold ------
      0.029   14.1   0.0      0.063   13.0   0.0    1.5  1  AAA_24    AAA domain
       0.11   12.4   0.0       0.54   10.1   0.0    2.0  1  ATPase_2  ATPase domain predominantly from Archaea


Domain annotation for each model (and alignments):
>> ORC5_C  Origin recognition complex (ORC) subunit 5 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  233.4   0.1   1.3e-72   3.7e-69       1     285 []     172     453 ..     172     453 .. 0.84

  Alignments for each domain:
  == domain 1  score: 233.4 bits;  conditional E-value: 1.3e-72
      ORC5_C   1 ihFppytreevleilskekps.......ngeeeeeeataklyerFvslvydslvkptardipelrsiceklWprFvaPildgelkpedfsrllaanral 92 
                 i Fp+y ++e+lei+++++p         +e+ e+e + ++++++++++++++++++ ++  ++r++++  Wp+Fv+Pi++g++ p d+ +l +++++ 
  EPX74334.1 172 IFFPQYMKDEILEICQNTPPIldfidetGEETFEDEIELSVWMQYCGFLWNVFGSHCLNNYRAFRDVVDLHWPQFVQPIVKGNVHPADYAQLHKLAKHA 270
                 78**************76555889999888889999********************************************************7777776 PP

      ORC5_C  93 frdqgesalaeelvektaasssassasskssssklpeLpylaklLLiAAYLASynpprlDlrlFsktsgks.kkrrkrrkgssqkskeka........k 182
                 ++++ + +           +  ++++ +  ++ k+ +Lp+l+k+LLi+A+LASynp+rlD+++Fs+++g++ ++r+ r+++++qk + ++        +
  EPX74334.1 271 LTSDLTVSRR--------LHIIEPTKIKYMHDAKSVDLPLLTKYLLISAFLASYNPSRLDAQFFSHSKGSKrRGRK-RKNTENQKLEPAKgakngtsrT 360
                 6664332222........223333444555566789********************************99955554.4444444333333455544433 PP

      ORC5_C 183 skkrk....isqkllgPkaFpLeRllAIfqailpeeeaepseeessetlsvdvlsqiatLvslrllvrtsaaagdkldgsekwrvnVswevirelArsv 277
                     k     sq  lgPkaF+LeRl+AI++ai p+  +          ls+dv++qi +L+sl++l ++ +++  +ld++ +++vnVs+e++ ++++sv
  EPX74334.1 361 ----KptakLSQLTLGPKAFELERLFAIYYAICPSGRH---------VLSADVFNQITSLTSLKMLLPAHKGSLRSLDSP-RFKVNVSREFVFKVSKSV 445
                 ....155559************************9966.........39*******************************.****************** PP

      ORC5_C 278 gfeleeYL 285
                  f+le+YL
  EPX74334.1 446 TFPLESYL 453
                 *******9 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   0.0   1.2e-11   3.7e-08       3     162 ..      15     142 ..      14     153 .. 0.75

  Alignments for each domain:
  == domain 1  score: 33.9 bits;  conditional E-value: 1.2e-11
      AAA_16   3 vGReeeleqLlsalervrsgrp.elvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipysalaqalareellrqlldeaesaeleawrek 100
                 ++R+e++e+L s+l   +++   ++++l+G s +GKs l+ ++l+  +kd   +++ + + +            +++  ll  +l++a  ++  a+++ 
  EPX74334.1  15 FCRDEQIEKLVSLLF--NDDCNvPSLILYGVSSTGKSYLLSQALNLSNKD---VIWINLKTC------------FTTPLLLYRILTHAGVDQDLAYKK- 95 
                 8*********99885..3333369********************988888...788888888............444457777888855544444444. PP

      AAA_16 101 leealaavpelagaeasrllellkrllallsrderplvlvlDdlqwadeaslqllaaLlrll 162
                             g + s + +ll++ +++ ++  + ++lvlD+++++ e s  l++ +++l+
  EPX74334.1  96 ------------GTQVSGFIHLLQQNISKNKN--H-VYLVLDQIDQFSEISPILFSMFADLA 142
                 ............23336799999999955554..6.*************9999999888874 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.57   1.7e+03      98     121 ..       4      33 ..       3      37 .. 0.70
   2 !   21.0   0.1     1e-07   0.00031       7     129 ..      37     156 ..      34     164 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.57
      AAA_22  98 DEaqh.lr.....seealeeLrsllnlsrk 121
                 DE q+ l      ++e++e+L+sll ++++
  EPX74334.1   4 DELQNkLKecvfcRDEQIEKLVSLLFNDDC 33 
                 99999996655555*******776543455 PP

  == domain 2  score: 21.0 bits;  conditional E-value: 1e-07
      AAA_22   7 ilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelka...erlsseellealeqalraravielliiDEaqh 102
                 +l+++G s tGK++ll + l+           +++v+ ++l+   +   ll ++l   g++++    ++ + + ++++l+q++++ + ++ l++D ++ 
  EPX74334.1  37 SLILYGVSSTGKSYLLSQALNLS---------NKDVIWINLKTCFTTPLLLYRILTHAGVDQDLaykKGTQVSGFIHLLQQNISKNKNHVYLVLDQIDQ 126
                 689*******************9.........*********99996666767777766665555688888888888************9********** PP

      AAA_22 103 lr..s...eealeeLrsllnlsrkgvqliLvG 129
                 ++  s     ++ +L    n    +++++L  
  EPX74334.1 127 FSeiSpilFSMFADLALNTN--LANLSVVLTL 156
                 *6553788888888877777..8888888865 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.1   2.5e-06    0.0073       4      88 ..      37     139 ..      34     162 .. 0.70

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 2.5e-06
      AAA_14   4 ilvitGaRrvGKTtllkqlikellvkkesilyinldderd....................kkladpe.....kllelileklke.ekktylflDEiqev 76 
                  l++ G+  +GK++ll q ++ +   +++++ inl++  +                    k     +      +++l+++++++ +++ yl+lD i + 
  EPX74334.1  37 SLILYGVSSTGKSYLLSQALNLS---NKDVIWINLKTCFTtplllyrilthagvdqdlayK-----KgtqvsGFIHLLQQNISKnKNHVYLVLDQIDQF 127
                 5899***************9444...599****9999665666777777777766554321.....13223355566666643358999********** PP

      AAA_14  77 pewekalkslvd 88 
                 +e++ +l s++ 
  EPX74334.1 128 SEISPILFSMFA 139
                 999999877766 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   2.1e-05     0.063       4      80 ..      37     130 ..      35     133 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2.1e-05
      AAA_24   4 kiliyGpsgiGKTtlakel....gpkplfi...............dtekGlk.sldadkfpdieswedfldevvelaaeladyktlviDtideleel 80 
                 ++++yG s +GK++l++++     ++++ i                t +G++ +l  +k+    ++  f++ ++++  ++++   lv+D id++ e+
  EPX74334.1  37 SLILYGVSSTGKSYLLSQAlnlsNKDVIWInlktcfttplllyriLTHAGVDqDLAYKKGT---QVSGFIHLLQQNISKNKNHVYLVLDQIDQFSEI 130
                 578****************998877777777888887888888885555543134444444...667888888888888888899*******99875 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00018      0.54       4      57 ..      17      68 ..      15     160 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00018
    ATPase_2  4 Rekelkeleeilerep.nei.yfiYGpegsGKtaLlkeiienledkdkyviyyial 57
                R++ +++l ++l ++  n + + +YG  + GK+ Ll ++++ +   +k+vi++ +l
  EPX74334.1 17 RDEQIEKLVSLLFNDDcNVPsLILYGVSSTGKSYLLSQALNLS---NKDVIWI-NL 68
                788888888877555414443567****************998...4456654.44 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (458 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       564  (0.0314574); expected 358.6 (0.02)
Passed bias filter:                      471  (0.0262703); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 3393.50
//
Query:       EPX74335.1  [L=406]
Description: inducer-sexual development Sds23/Moc1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.4e-19   68.4   0.1    7.9e-05   23.0   0.0    4.6  5  CBS       CBS domain


Domain annotation for each model (and alignments):
>> CBS  CBS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.0   9.2e-06      0.17       9      47 ..      55      95 ..      44     105 .. 0.80
   2 !   23.0   0.0   4.4e-09   7.9e-05       9      56 ..     145     191 ..     137     192 .. 0.89
   3 !   17.7   0.0     2e-07    0.0036       7      51 ..     216     260 ..     204     262 .. 0.90
   4 ?   -3.1   0.0      0.62   1.1e+04      13      36 ..     302     325 ..     298     339 .. 0.70
   5 !    9.3   0.0   8.4e-05       1.5      40      55 ..     350     365 ..     340     367 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 9.2e-06
                CEEEETTSBHHHHHHHHHHHTSSEEEEE..ETTTBEEEEEE CS
         CBS  9 vvtvppdttleealelmrekgvsrlPVV..dedgklvGivt 47
                +  ++p+t++eea  +++++++s+lP++   +++++v  + 
  EPX74335.1 55 IALIDPETSMEEASSILIDRELSALPILaaKGSNEIVSTFD 95
                5679************99*********97766667776555 PP

  == domain 2  score: 23.0 bits;  conditional E-value: 4.4e-09
                 CEEEETTSBHHHHHHHHHHHTSSEEEEEETTTBEEEEEEHHHHHHHHH CS
         CBS   9 vvtvppdttleealelmrekgvsrlPVVdedgklvGivtlrDllrall 56 
                 ++t+pp+ttl+e+++++  +g++r+ V++e+g+l  + ++r ++r+l 
  EPX74335.1 145 FMTIPPTTTLGELAKTL-ASGIRRVAVTNESGELSFMASQRSIIRFLW 191
                 47***************.999************998888888888875 PP

  == domain 3  score: 17.7 bits;  conditional E-value: 2e-07
                 SSCEEEETTSBHHHHHHHHHHHTSSEEEEEETTTBEEEEEEHHHH CS
         CBS   7 rdvvtvppdttleealelmrekgvsrlPVVdedgklvGivtlrDl 51 
                  d+ +++ d+ ++ al++m ++g+++l VVd++ +l+G ++l D+
  EPX74335.1 216 CDITCISGDEKVALALRQMNQTGIGSLAVVDSQFRLLGNISLVDV 260
                 47899**************9999*******9999******99886 PP

  == domain 4  score: -3.1 bits;  conditional E-value: 0.62
                 ETTSB.HHHHHHHHHHHTSSEEEEE CS
         CBS  13 ppdtt.leealelmrekgvsrlPVV 36 
                 ++++t    +++l   + ++rl  V
  EPX74335.1 302 YESSTfAFTLAKLV-ATQCHRLWLV 325
                 56666344445555.6668999766 PP

  == domain 5  score: 9.3 bits;  conditional E-value: 8.4e-05
                 TBEEEEEEHHHHHHHH CS
         CBS  40 gklvGivtlrDllral 55 
                 ++l+G+v+l+D++++l
  EPX74335.1 350 NQLLGVVSLTDIISVL 365
                 579**********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (406 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       431  (0.0240393); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 3031.22
//
Query:       EPX74336.1  [L=759]
Description: GTPase activating protein Gap1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.9e-49  166.2   0.2      2e-48  164.9   0.2    1.7  1  RasGAP    GTPase-activator protein for Ras-like GTPase
    1.2e-21   77.3   0.7    1.2e-21   77.3   0.7    2.4  2  RasGAP_C  RasGAP C-terminus


Domain annotation for each model (and alignments):
>> RasGAP  GTPase-activator protein for Ras-like GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.9   0.2   2.3e-52     2e-48       1     208 []     170     373 ..     170     373 .. 0.92

  Alignments for each domain:
  == domain 1  score: 164.9 bits;  conditional E-value: 2.3e-52
      RasGAP   1 liseliklElessenpndllrsnsvvsklleeytkrpegqeyLkkilkpllqkilekedlnlelDPrkiyeelkkkkesktgkksessgkksekeasel 99 
                 l++ +++ E+e ++++ +llr+n+ vs+++++yt+r+ gq yL++il ++++++  +++++l+++P ++y++l+++ +       + +    + e++ +
  EPX74336.1 170 LFQMVLTSEFEATSDVTSLLRANTPVSRMMTTYTRRGPGQAYLRSILYQIINEVAADDSKSLQINPLQVYQQLVDNATLP----ID-DVTGLTTEEIAS 263
                 688999************************************************99********************9995....22.333344444444 PP

      RasGAP 100 ek.vsqmleknldkLkelvneildsIfksleqlPvgiRiickqirekvkekfpdaseeeilnligsflflrfliPaivnPklfglvdkqiseeqrrnLt 197
                    +++++ ++ ++Lk++++++l+sI++sl+ +P+giR+ick ir ++++ fp+  +++i+ lig+f+flrf++Pai++P+ ++l++ ++s++ r++L 
  EPX74336.1 264 IPiIKETIAERSTELKQITQRFLESILRSLDAVPYGIRWICKLIRSLINRFFPKVPDSTICSLIGGFFFLRFINPAIISPQTSMLLETNPSDNVRKTLA 362
                 443888888*****************************************************************************9999********* PP

      RasGAP 198 liaKllqnlan 208
                 +iaK++q++an
  EPX74336.1 363 AIAKIIQSVAN 373
                 *********97 PP

>> RasGAP_C  RasGAP C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.2      0.92   8.3e+03      50      87 ..      47      84 ..      44     102 .. 0.59
   2 !   77.3   0.7   1.4e-25   1.2e-21       3     134 ..     550     680 ..     548     682 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 0.92
    RasGAP_C 50 eElesleetlktLseknnylesqlesYkayienvleql 87
                +El+ l++ ++  s++n  le++++ +++ i   +++ 
  EPX74336.1 47 RELQELKQRISIQSKRNFVLEKDVRFLDSRIALLIQNR 84
                56666666665555555556777776666666555554 PP

  == domain 2  score: 77.3 bits;  conditional E-value: 1.4e-25
    RasGAP_C   3 elkkkalenlkeLeelgvisrennyqellneIakdirnkgrlrekrkeElesleetlktLseknnylesqlesYkayienvleqlkkkkgklpfskqyf 101
                 +++ ka++ l++L++l+++ +enny+ l +e++k+  + ++ +++++ E ++l++++k+++++n+yl++qle Y +y+ n+++q++ ++g+   sk+  
  EPX74336.1 550 RKGLKAIQLLERLSDLNLVYKENNYEPLASEVEKEYLSFDKIIRRIQVERDALKDVHKAICDHNEYLRTQLEIYASYLANARNQISGTNGE---SKRLA 645
                 7899*********************************************************************************888744...33444 PP

    RasGAP_C 102 kkrel..kksgklpkfgsykysakqLeekgVLlei 134
                 + +     k +  ++   +++sa q++++ +Ll++
  EPX74336.1 646 RGVGVigIKPKHNKTGEVVRFSALQMKKESILLDF 680
                 4443332222333444689*************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (759 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       736  (0.0410508); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.27s 00:00:00.93 Elapsed: 00:00:00.42
# Mc/sec: 5425.48
//
Query:       EPX74337.1  [L=535]
Description: chaperonin-containing T-complex zeta subunit Cct6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
     2e-161  537.9   1.9   2.3e-161  537.8   1.9    1.0  1  Cpn60_TCP1   TCP-1/cpn60 chaperonin family
  ------ inclusion threshold ------
       0.15   12.1   1.8       0.23   11.5   0.1    2.1  3  Lin0512_fam  Conserved hypothetical protein (Lin0512_fam)


Domain annotation for each model (and alignments):
>> Cpn60_TCP1  TCP-1/cpn60 chaperonin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  537.8   1.9  2.6e-165  2.3e-161       1     490 [.      28     525 ..      28     526 .. 0.98

  Alignments for each domain:
  == domain 1  score: 537.8 bits;  conditional E-value: 2.6e-165
                 HHHHHHCCSSTTXXEEEEEETTSEEEEEXSHHHHHHCSXXXSHHHHHHHHHHHHCCCCCTTCHHHHHHHHHHHHHHHHHHHHCTXXHHHHHHHHHHHHH CS
  Cpn60_TCP1   1 ladivkttlGPkGmdKmlvnkggkvvvTnDGatilkeleiehPaakllveaaesqdeevGDGTttvviLageLleeaekliaagvhpttiiegyekale 99 
                 l+d+++++lGP+G++Kmlv+ +g +++T+DG+++l+e++i++P+a ++++aa++qde +GDGTt+v++L+geLl+++e +i++g+hp+ i +g++ a+ 
  EPX74337.1  28 LQDVLRSNLGPTGTTKMLVDGAGGIKLTKDGKVLLTEMQIQNPTASCIAKAATAQDEVTGDGTTSVCLLVGELLKQSELYIREGLHPSLISDGFDLAKI 126
                 789************************************************************************************************ PP

                 HHHHHHHHHXEEBXSCSTT.HHHHHHHHHHCTTSSXXSTHHHHHHHHHHHHHCHCCCSEECSCCCEECCCCEECECTTSEEESEEEESS--SSTTSSCE CS
  Cpn60_TCP1 100 kaleaLkeiaveisseekdreeLlkvartslsskltskeaeelsklvvdAvklieenekeldlgrikvvkieggsledselveGlvldkgvlspdmpkk 198
                 + l++L+  + +++++   re Ll+va+tsl++k++sk  e l+  vvdAv++i+++++++dl++++++k++++s++ds++++Gl+ld+g ++pdmpk+
  EPX74337.1 127 ESLKFLEDFKTNFEVD---REVLLNVAKTSLNTKISSKVVESLAPAVVDAVLAIRKDNGPIDLHMVEIMKMQNRSSSDSKIIKGLLLDHGTRHPDMPKQ 222
                 *********8999987...9**********************************9999***************************************** PP

                 EECEEEEEESS-BS--HHCCHHHCCCCSCCHHHHHHHHHHHHHHHHHHHHHHTTECE..........EEESS-B-HHHHHHHHHCT-EEE-S--HHHHH CS
  Cpn60_TCP1 199 lenakvllldvsLeiektetkttvvlsdaeeleklekaeekqleellekiiksgvnv..........vvcqkgiddlalhflakngilalrrvkkkdle 287
                 ++na vl+l+vsLe+ek+e+++++ +s+ e++e+l+++e+++++++l+ki++++++v          v++qkgid+l+l++lakngi+alrr+k++++e
  EPX74337.1 223 VKNAFVLTLNVSLEYEKSEINSGFFYSTSEQRERLVESERNFVDQKLRKIVELKKEVcerdptsnfvVINQKGIDPLSLDVLAKNGIMALRRAKRRNME 321
                 *************************************************************************************************** PP

                 HHHHHHT--EBSCGGGGGCGC-EEEEEEEECCETTCCEEEEECESSSSXEEEEEEESTCCCHHHHHHHHHHHHHHHHHHHHHHEEEETTTCHHHHHHHH CS
  Cpn60_TCP1 288 rlakatGatavssledltpeelGtakkveeekigsekttiieevksgkiatillrgatdtvldeieraiedAlnvvknaiedekvvpGGGatelelakk 386
                 rl  ++G+ a +s+edltpe lG+a++v+e+++g+ek+t++e+vk++k++til+ g++d+++++i++a +d+l++vknaied+++v+G+Ga+e+++a++
  EPX74337.1 322 RLQLICGGVAQNSVEDLTPEVLGWAGSVYEQTMGEEKFTFVEDVKEPKSVTILIHGPNDYTIKQIQDATRDGLRAVKNAIEDNCLVAGAGAFEIACASH 420
                 *************************************************************************************************** PP

                 HHCCCCT..SXCCHHHHHHHHHHHHTHHHHHHHHHCTSXHHHHHHHHHHHHHTTXTTEEEETTTTCEEECCCCTXEEEHHHHHHHHHHHHHHHHHHHCE CS
  Cpn60_TCP1 387 lkeyaks..vsgeeqlaieafakALevipktLaeNaGldpievlaklraahnkgekelgidvesgeiidlveagvvDplkvkrqalksAteaastiLri 483
                 l+++  +  v+g+ ++++ afa+AL+vipktLa N+ +d ++ +  l+++  +g  ++g+d+++g + d+  +g++D+++v r +l+sAt +a  ++++
  EPX74337.1 421 LRNKFAQqeVKGKAKMGVYAFADALLVIPKTLAANSSYDIQDAIVALQEEATEGY-KVGLDIRTGLPFDPEIEGIYDNYRVIRHMLHSATVIAGNLISV 518
                 *96544447****************************************999999.******************************************* PP

                 EEEEXXX CS
  Cpn60_TCP1 484 deiikak 490
                 d+i++a+
  EPX74337.1 519 DQILRAG 525
                 ***9986 PP

>> Lin0512_fam  Conserved hypothetical protein (Lin0512_fam)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.55   4.9e+03      74      90 ..      37      54 ..       9      80 .. 0.47
   2 ?   -3.3   0.0         1   9.2e+03      65      97 ..     158     193 ..     133     202 .. 0.55
   3 ?   11.5   0.1   2.6e-05      0.23      15      38 ..     387     410 ..     383     426 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.55
  Lin0512_fam 74 lPygevevevv.eGGldv 90
                  P g++++ v   GG++ 
   EPX74337.1 37 GPTGTTKMLVDgAGGIKL 54
                 355555444432455554 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1
  Lin0512_fam  65 vdleavkavlPy..gev.evevveGGldvsgialee 97 
                  +  + v+++ P     v  ++  +G +d + +++ +
   EPX74337.1 158 ISSKVVESLAPAvvDAVlAIRKDNGPIDLHMVEIMK 193
                  444444444444221222444555555555555544 PP

  == domain 3  score: 11.5 bits;  conditional E-value: 2.6e-05
  Lin0512_fam  15 qdvtkAAvrAvkdAisrnslpgla 38 
                  qd+t+   rAvk+Ai+ n+l++ a
   EPX74337.1 387 QDATRDGLRAVKNAIEDNCLVAGA 410
                  9*******************7655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (535 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       679  (0.0378716); expected 358.6 (0.02)
Passed bias filter:                      563  (0.0314016); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.24s 00:00:00.81 Elapsed: 00:00:00.40
# Mc/sec: 4023.11
//
Query:       EPX74338.1  [L=503]
Description: U3 snoRNP protein Nop56 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.3e-87  291.8   0.0    3.3e-87  291.8   0.0    1.7  2  Nop           snoRNA binding domain, fibrillarin
      7e-20   71.2   0.4      7e-20   71.2   0.4    2.4  2  NOP5NT        NOP5NT (NUC127) domain
  ------ inclusion threshold ------
      0.096   12.8   0.1        5.3    7.2   0.0    2.6  2  Tricorn_C1    Tricorn protease C1 domain
       0.41   10.9  10.2       0.71   10.1  10.2    1.4  1  GAGA_bind     GAGA binding protein-like family
       0.52    9.7  17.1        1.1    8.6  17.1    1.5  1  CobT          Cobalamin biosynthesis protein CobT
        1.8    8.3  18.3        3.1    7.5  18.3    1.4  1  RR_TM4-6      Ryanodine Receptor TM 4-6
        3.2    5.9  24.4        4.3    5.5  24.4    1.1  1  CDC45         CDC45-like protein
        9.7    6.2  36.4         19    5.3  36.4    1.4  1  RNA_polI_A34  DNA-directed RNA polymerase I subunit RPA34.5


Domain annotation for each model (and alignments):
>> Nop  snoRNA binding domain, fibrillarin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  291.8   0.0   1.5e-90   3.3e-87       2     228 ..     177     408 ..     176     409 .. 0.94
   2 ?   -5.2   3.2         8   1.8e+04      72      77 ..     466     471 ..     424     500 .. 0.48

  Alignments for each domain:
  == domain 1  score: 291.8 bits;  conditional E-value: 1.5e-90
                 HHHHHHHHHHHHHHHHHHHTTTSTCHHHHS-SHHHHHHHHHHCCCCHCCT.HH..TT........HHHHHHHHHHHHCHHHH-SSS-S-HHHHHHHHHH CS
         Nop   2 ldeidkeintlhkrvrewYswhFpELeslvkdnleYakvvkligneredlekk..ee.......deelakevimaakvtastsmgaelseedlknikel 91 
                 ld++dk+int+++r++ewYswhFpEL+++v +n++Ya v+k+ig ++++++++  ++       d+++a+++i  a+v    smg+++s  dl+ni+++
  EPX74338.1 177 LDQLDKDINTFSMRMKEWYSWHFPELSKIVGENYKYALVAKFIG-DKNSVNDEilHDlaalvddDKDVAQSIISSARV----SMGQDISAIDLENISAF 270
                 89******************************************.888885554433777886455599999999999....***************** PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHCHHHHHHHHHHHHSSHHHHHCS-HHHHTTTT-HHHHCCCHH.T---SSSCHHHCSHHHHHTS-CCCH CS
         Nop  92 cdrvleleelrkelleYlesrmsaiAPNlsaLvGeevaarLishaGgLtnLakmPastiqilGaekalfralk.kkntpkyGliyhselvqkatppklk 189
                 ++rv++l+e+r++l++Yl ++ms++APNl++L+Ge v+arLishaG+LtnL+k+Past+qilGaekalfralk ++ntpkyG+iyhs++++ka   k+k
  EPX74338.1 271 AERVIKLSEYRRQLHNYLVQKMSVVAPNLAELIGEMVGARLISHAGSLTNLSKCPASTVQILGAEKALFRALKtRGNTPKYGIIYHSSFIGKA-GSKNK 368
                 *************************************************************************777***************77.***** PP

                 HHHHHHHHHHHHHHHHHHHTT---.-SHHHHHHHHHHHHH CS
         Nop 190 kkiaRllaaKvalaaRiDafsekd.gslGkklreeiekkl 228
                 ++i+R+la+K+++a+RiD+fs+ + +++G+ lr++++++l
  EPX74338.1 369 GRISRFLANKCSIASRIDNFSDIPsTAFGEVLRRQVDERL 408
                 ********************99888*************98 PP

  == domain 2  score: -5.2 bits;  conditional E-value: 8
                 HHH-SS CS
         Nop  72 astsmg 77 
                  ++++g
  EPX74338.1 466 EKKEKG 471
                 111222 PP

>> NOP5NT  NOP5NT (NUC127) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.2   0.4   3.1e-23     7e-20       1      65 []       4      69 ..       4      69 .. 0.92
   2 ?  -10.7   9.4         8   1.8e+04      34      34 ..     474     474 ..     447     501 .. 0.57

  Alignments for each domain:
  == domain 1  score: 71.2 bits;  conditional E-value: 3.1e-23
      NOP5NT  1 fiLfEtaaGYaLfkvkdk....kllkkddlvkdsvsdlekfsklvkLkaFqkFesaaeALenanaiseG 65
                ++L+E+a+GY+Lf v  +     ++k+   v+ s++dl+kf+k+v+L +F++F++aa+ALenan++seG
  EPX74338.1  4 YLLYESATGYSLFDVVGAeevaGKTKE---VQLSLQDLSKFGKVVQLRSFVPFKNAAHALENANDVSEG 69
                89*************777656666666...**************************************9 PP

  == domain 2  score: -10.7 bits;  conditional E-value: 8
      NOP5NT  34 l 34 
                  
  EPX74338.1 474 K 474
                 1 PP

>> Tricorn_C1  Tricorn protease C1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0      0.06   1.3e+02      48      66 ..     298     316 ..     281     319 .. 0.87
   2 ?    7.2   0.0    0.0024       5.3       7      52 ..     395     444 ..     393     449 .. 0.86

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.06
                 HHHHHHHHHHHTT--S--- CS
  Tricorn_C1  48 eladllsemlgeLntsHvy 66 
                 +la+l+ em+g    sH++
  EPX74338.1 298 NLAELIGEMVGARLISHAG 316
                 699**************97 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0024
                 HHHHHHHHHHHH...SS-HHHHHH.HHHHHHHHHHGGGGG--SHHHHHHH CS
  Tricorn_C1   7 mfdeawrllrdk...Fydpdmhgv.DWeavkerYepllprvatrdeladl 52 
                 +f e+ r++ d+   Fyd  +  + +  a+ e Ye+ l  v+ +++ +d+
  EPX74338.1 395 AFGEVLRRQVDErlgFYDTGVAPTrNSVAMSEAYEKALSNVKLDADEEDV 444
                 799999999888899****9887779**************9988886666 PP

>> GAGA_bind  GAGA binding protein-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1  10.2   0.00032      0.71     126     187 ..     441     499 ..     370     503 .] 0.56

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00032
   GAGA_bind 126 sselveesavvekeeaakkrqqgkrpkepkakkakkaarkpkeegedlalkkakrsksekks 187
                 ++++ ee +v+   +a kk +++k++k++k++k++k+++  k++++d a +++k+sk++kks
  EPX74338.1 441 EEDVAEE-EVKD--DADKKDKKSKKEKKEKKEKGEKKEKSKKKRSSDDADEDSKKSKKKKKS 499
                 2222222.2222..223333333333333334444433333333333344555555555554 PP

>> CobT  Cobalamin biosynthesis protein CobT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6  17.1   0.00048       1.1     181     264 ..     415     498 ..     394     503 .] 0.49

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00048
        CobT 181 aealeDqkaFaravrqlLqdldla.eesaeepeeedeeeeedeeeeeeeseeeeeegedddkeeqeeaaseeeeeededeesket 264
                  + +++ +a ++a ++ L++ +l  +e+  ++ee +++++++++++++e++e++e+ge+++k+++++ +s++++e+++++++k++
  EPX74338.1 415 VAPTRNSVAMSEAYEKALSNVKLDaDEEDVAEEEVKDDADKKDKKSKKEKKEKKEKGEKKEKSKKKR-SSDDADEDSKKSKKKKK 498
                 55678899999***********994444444444444444444444444333333333333333222.22223332222222222 PP

>> RR_TM4-6  Ryanodine Receptor TM 4-6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5  18.3    0.0014       3.1      91     149 ..     432     500 ..     396     503 .] 0.35

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0014
                 X.............XXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXX..........XXXXXXXXXXXX CS
    RR_TM4-6  91 a.............eeeeaeeekeeeeepeaeaeekadaengekeekekekeeeekeseeeeeekkkkkkak 149
                               eee++++++++++++++e  +k+++e+gek+ek+k+k ++ +++ e+++++kkkkk++
  EPX74338.1 432 LsnvkldadeedvaEEEVKDDADKKDKKSKKE--KKEKKEKGEKKEKSKKKRSS-DDADEDSKKSKKKKKSH 500
                 22222222211111222222222222222222..23334444444444442222.22222222222222222 PP

>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5  24.4    0.0019       4.3     119     195 ..     424     500 ..     405     503 .] 0.48

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0019
       CDC45 119 ereayealeeeeesdeede...eeeeeddddeeeeeeeeedeedeeedeeeskkkrksksdeeee.sddddersrkrrrse 195
                   eaye+  ++ + d ++e   e   e+ + +++++++++++++++e++e+ +kk+ksk++++++  d+d+++s+k+++s+
  EPX74338.1 424 MSEAYEKALSNVKLDADEEdvaE---EEVK-DDADKKDKKSKKEKKEKKEKGEKKEKSKKKRSSDdADEDSKKSKKKKKSH 500
                 56899999999998855542322...2222.22222222222222333333333334333333331333333444444333 PP

>> RNA_polI_A34  DNA-directed RNA polymerase I subunit RPA34.5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3  36.4    0.0083        19     137     202 ..     438     499 ..     410     502 .. 0.52

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0083
                   ....XXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXX..XXXXXX...XXXXXX CS
  RNA_polI_A34 137 egekekkkkpkakkkekkkkkkkaaeedeeeeapkkkkkkkkkkkekkeeekkeekeeeskkskkk 202
                   + ++e+++ ++ k+ ++kk+kk+++e++  e+++k +kk+k+kkk+  +  +++e++++skk+kk+
    EPX74338.1 438 DADEEDVAEEEVKDDADKKDKKSKKEKK--EKKEKGEKKEKSKKKRSSD--DADEDSKKSKKKKKS 499
                   3444555555555555555555555555..4444444444444444443..344444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (503 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2628  (0.146578); expected 358.6 (0.02)
Passed bias filter:                      847  (0.0472419); expected 358.6 (0.02)
Passed Vit filter:                       243  (0.0135535); expected 17.9 (0.001)
Passed Fwd filter:                        32  (0.00178482); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.83u 0.30s 00:00:01.12 Elapsed: 00:00:00.46
# Mc/sec: 3316.57
//
Query:       EPX74339.1  [L=499]
Description: eIF3e subunit Int6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.1e-47  160.9   8.0    7.6e-47  159.1   3.8    2.5  2  eIF3_N          eIF3 subunit 6 N terminal domain
    0.00055   20.4   0.3     0.0024   18.3   0.3    2.2  1  PCI             PCI domain
     0.0068   16.2   1.8       0.15   11.9   0.1    3.4  3  IF2_N           Translation initiation factor IF-2, N-termina
  ------ inclusion threshold ------
       0.06   12.8   0.0       0.13   11.7   0.0    1.5  1  BAR_3_WASP_bdg  WASP-binding domain of Sorting nexin protein
      0.076   13.1   4.0       0.17   11.9   0.7    2.4  2  RP-C_C          Replication protein C C-terminal region
      0.081   12.8   0.7       0.18   11.7   0.7    1.5  1  DUF4859         Domain of unknown function (DUF4859)
       0.33   11.5   3.7       0.59   10.7   3.7    1.3  1  Alpha_GJ        Alphavirus glycoprotein J
       0.36   10.8   2.5         23    5.0   0.0    3.6  4  DUF4250         Domain of unknown function (DUF4250)
        1.2    9.1   4.9       0.46   10.5   1.7    1.9  3  DUF4366         Domain of unknown function (DUF4366)


Domain annotation for each model (and alignments):
>> eIF3_N  eIF3 subunit 6 N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.1   3.8   3.8e-50   7.6e-47       1     133 []      16     151 ..      16     151 .. 0.95
   2 ?    3.3   0.1     0.051     1e+02      81     118 ..     360     397 ..     349     410 .. 0.80

  Alignments for each domain:
  == domain 1  score: 159.1 bits;  conditional E-value: 3.8e-50
      eIF3_N   1 DLtskllpyLDrHLvfpLLeflsekeiydeeellkaklellkkTnmvdyaadlykeleg..eee.vpeelekkreevleeleeleeeaekvlelledee 96 
                 DL +k++++LDrHL+fpLLefls +++++ +ell+ak++llk+Tnm+dy+a+l++el+g  ++e  ++++++kr++vl+el+eleee++ +l +le+++
  EPX74339.1  16 DLSQKIMQHLDRHLIFPLLEFLSLRNTHNPKELLQAKYDLLKDTNMTDYVANLWTELHGgqTDEaLANQFAEKRKSVLDELSELEEEVQGILGVLENPD 114
                 9*********************************************************6334443566******************************* PP

      eIF3_N  97 vvsnlrsdkkqnlefLkeehgitpemidalykfakFq 133
                  +++lr+dk qnl++L+e+++itpe i++lykfa+Fq
  EPX74339.1 115 LIAALRQDKGQNLQHLQEHYNITPERIAVLYKFAQFQ 151
                 ************************************8 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.051
      eIF3_N  81 leeeaekvlelledeevvsnlrsdkkqnlefLkeehgi 118
                 l e+  ++ ++++ +e +++l+ d++q++++ +++ + 
  EPX74339.1 360 LAEAYCRIHSVISVDELANKLEMDSAQLIQLVENQNNA 397
                 5566778999********************99988765 PP

>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.3   1.2e-06    0.0024       3      78 ..     312     388 ..     310     394 .. 0.87

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 1.2e-06
                 HHHHHHHHHHTS.HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCESEEEHHHHHHHHTSSHHHHH CS
         PCI   3 ysdllkalrsgn.lsgfseelkdleeelladdglaqllesLekkvrerllrqvskiyssislerlaklldlsvdevE 78 
                 ++ +++al+s   +++ +++l+++ee l  d +l  l + + + +r+ l + +++i+s is+++la++l++++ ++ 
  EPX74339.1 312 ITSFISALYSEVdFEKTQRCLRECEEVLKTDFFLVSLCDHFMEAARKLLAEAYCRIHSVISVDELANKLEMDSAQLI 388
                 6667778888777***********999999999999************************************97654 PP

>> IF2_N  Translation initiation factor IF-2, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.1      0.62   1.2e+03      15      25 ..     110     120 ..      80     131 .. 0.52
   2 !   11.9   0.1   7.5e-05      0.15       3      22 ..     370     389 ..     368     395 .. 0.89
   3 ?    1.3   0.0      0.16   3.1e+02      19      44 ..     468     492 ..     467     494 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.62
       IF2_N  15 vkskevikkLf 25 
                 +++ ++i+ L 
  EPX74339.1 110 LENPDLIAALR 120
                 34455555555 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 7.5e-05
       IF2_N   3 kirVyeLAkeLgvkskevik 22 
                  i+V eLA++L ++s+++i+
  EPX74339.1 370 VISVDELANKLEMDSAQLIQ 389
                 69*****************8 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.16
       IF2_N  19 evikkLfkelGievkshsssLDeeta 44 
                 ++i++  k+lG+e  +  ++L+   a
  EPX74339.1 468 QIIDRT-KSLGYESQNLEQTLSRSIA 492
                 689999.88****9999999998776 PP

>> BAR_3_WASP_bdg  WASP-binding domain of Sorting nexin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   6.4e-05      0.13     109     168 ..      73     132 ..      54     147 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 6.4e-05
  BAR_3_WASP_bdg 109 atgktYeeigevfaeqpkkDleflletleeYkGllanf..PDiigvhkgalekvkesdklve 168
                     + g+t e++++ fae+ k  l+ l+e+ ee +G+l+ +  PD+i + ++  +k ++ ++l e
      EPX74339.1  73 HGGQTDEALANQFAEKRKSVLDELSELEEEVQGILGVLenPDLIAALRQ--DKGQNLQHLQE 132
                     569999*****************************98666999987664..44444444444 PP

>> RP-C_C  Replication protein C C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.1      0.14   2.8e+02      22      65 ..      86     132 ..      76     151 .. 0.73
   2 ?   11.9   0.7   8.7e-05      0.17       9      88 ..     357     440 ..     349     472 .. 0.73

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.14
      RP-C_C  22 laeleelleelealreevenal...esalkaenssanesqnerhiqn 65 
                 +++ +++l+el +l eev+ +l   e+ +  +  +  + qn +h q+
  EPX74339.1  86 AEKRKSVLDELSELEEEVQGILgvlENPDLIAALRQDKGQNLQHLQE 132
                 55667899999999999999997665555555555555566666654 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 8.7e-05
      RP-C_C   9 fralverlprkatlaeleelleelealreevenalesalkaenssanesqnerhiqnsnpdsssese....pasekereekeaa 88 
                  + l+e+  r  ++ ++ el+++le+ ++++ +++e++++a+ s a +++n++  ++s + ss+       p++e+++e++e +
  EPX74339.1 357 RKLLAEAYCRIHSVISVDELANKLEMDSAQLIQLVENQNNAAGSTAAAATNQANNEESDTASSTAGTgdiiPETETTTEAEEPE 440
                 344566777999999*****************************9999999999999999655553334444444444433332 PP

>> DUF4859  Domain of unknown function (DUF4859)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.7   8.9e-05      0.18       9      59 ..     371     422 ..     363     425 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 8.9e-05
     DUF4859   9 ldaakiakaLgltteelvta..lkaeeagskvklytvesdgtlseltsastan 59 
                 ++ +++a++L+++ ++l++    +++ ags+++ +t ++++++s +t++sta+
  EPX74339.1 371 ISVDELANKLEMDSAQLIQLveNQNNAAGSTAAAATNQANNEES-DTASSTAG 422
                 6889***************9434445566666666666666643.55555554 PP

>> Alpha_GJ  Alphavirus glycoprotein J
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   3.7   0.00029      0.59      29      84 ..     394     447 ..     375     451 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00029
    Alpha_GJ  29 ttatvgaanaaavanatganatsaaaastiaatvgapptdstvaaetPgpflptdf 84 
                  ++++g+  +aa+a+ +++n  s +a+st+ +    p t++t+ ae P p ++  f
  EPX74339.1 394 QNNAAGS--TAAAATNQANNEESDTASSTAGTGDIIPETETTTEAEEPEPEPQFSF 447
                 3333333..34456666667777777888888788999***********9998665 PP

>> DUF4250  Domain of unknown function (DUF4250)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.011        23      16      49 ..     119     153 ..     117     156 .. 0.85
   2 ?   -2.3   0.0       2.2   4.4e+03      30      49 ..     290     309 ..     288     314 .. 0.81
   3 ?    3.6   0.1     0.033        66      22      40 ..     372     390 ..     366     395 .. 0.86
   4 ?   -3.2   0.0       4.4   8.8e+03      36      47 ..     468     479 ..     467     488 .. 0.62

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.011
     DUF4250  16 LRDey.ssldelcedldidkeeleekLasigYeYd 49 
                 LR +  ++l++l e+++i+ e +    + + ++Y+
  EPX74339.1 119 LRQDKgQNLQHLQEHYNITPERIAVLYKFAQFQYN 153
                 7755559****************988888888887 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 2.2
     DUF4250  30 ldidkeeleekLasigYeYd 49 
                 ++    +l+  +++  YeY+
  EPX74339.1 290 YQRRMRDLIRIINQESYEYS 309
                 66777889999999999997 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.033
     DUF4250  22 sldelcedldidkeeleek 40 
                 s+del+++l++d ++l++ 
  EPX74339.1 372 SVDELANKLEMDSAQLIQL 390
                 89**************985 PP

  == domain 4  score: -3.2 bits;  conditional E-value: 4.4
     DUF4250  36 eleekLasigYe 47 
                 +++++ +s+gYe
  EPX74339.1 468 QIIDRTKSLGYE 479
                 566666677775 PP

>> DUF4366  Domain of unknown function (DUF4366)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       3.8   7.6e+03      51      72 ..     107     128 ..      95     135 .. 0.76
   2 ?   -3.6   0.0       5.2     1e+04      88     110 ..     257     288 ..     255     297 .. 0.60
   3 ?   10.5   1.7   0.00023      0.46      54     115 ..     382     446 ..     380     458 .. 0.71

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 3.8
     DUF4366  51 LnqVdeaDLlalleedeeaake 72 
                 L   ++ DL+a+l +d+ ++ +
  EPX74339.1 107 LGVLENPDLIAALRQDKGQNLQ 128
                 5566778999999888877665 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 5.2
     DUF4366  88 vntdcpv.........eepepekeaepeepee 110
                 ++t+cp          ++ +++++++p++p +
  EPX74339.1 257 IQTSCPWllrylavavVTNQNNANQKPRNPRQ 288
                 66777766666666665555555555555444 PP

  == domain 3  score: 10.5 bits;  conditional E-value: 0.00023
     DUF4366  54 VdeaDLlalleedeeaakeeeevcactekcaagkvntdcpv...eepepekeaepeepeeepekk 115
                  d a L++l+e++++aa  + ++++ +++ ++ +  ++++      pe+e+++e eepe+ep+ +
  EPX74339.1 382 MDSAQLIQLVENQNNAAGSTAAAATNQANNEESDTASSTAGtgdIIPETETTTEAEEPEPEPQFS 446
                 58999*****9999999887777766666555544444433677788888888888888887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (499 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1214  (0.0677115); expected 358.6 (0.02)
Passed bias filter:                      725  (0.0404373); expected 358.6 (0.02)
Passed Vit filter:                        71  (0.00396006); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.41
# Mc/sec: 3626.41
//
Query:       EPX74340.1  [L=530]
Description: oxysterol binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.3e-49  168.2   1.7    3.9e-30  104.9   2.4    3.2  2  Oxysterol_BP  Oxysterol-binding protein


Domain annotation for each model (and alignments):
>> Oxysterol_BP  Oxysterol-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.2   0.0   1.1e-18     2e-14       2     116 ..      42     163 ..      41     190 .. 0.83
   2 !  104.9   2.4   2.2e-34   3.9e-30      94     356 ..     261     508 ..     246     522 .. 0.87

  Alignments for each domain:
  == domain 1  score: 53.2 bits;  conditional E-value: 1.1e-18
                   HHCCHTTSTT.-BCCCS..---GGGEEEEEHHHHHHHCCTTCHHHHHHHC.SSHHHHHHHHHHHHHHCCCGCTSTSSSEEE---TT-EEEEEETT.. CS
  Oxysterol_BP   2 lwsilkkciG.kDLski..slPvffneplSlLqrlaedleyselLdkaakeddsleRlayVaaFalSsyastikrrlkKPFNPlLGEtfelvred.. 93 
                   ++silk+ciG kD+ ++  slP +++ep+  L+ + +++  ++ + ++ ++dd+leR++ V+++++++    i +r+ KP+N +LGE f+++++   
    EPX74340.1  42 VLSILKQCIGvKDIASLrfSLPAQLLEPVGNLE-YWNYVDRPDYFATMGDNDDDLERMLSVLRWWFTKDLRFIRGRVVKPYNSVLGEFFRCKWDVde 137
                   589*******8899865449************9.789************************************9*******************5435 PP

                   ...CEEEEEEEEEETTTTEEEEEEEE CS
  Oxysterol_BP  94 ...kgfrfiaEQVsHhPpvsAfhaes 116
                      ++ + i    sH P     ++es
    EPX74340.1 138 pvvREDHTIDPESSHLPLHKTEYTES 163
                   55544455555566666555555555 PP

  == domain 2  score: 104.9 bits;  conditional E-value: 2.2e-34
                   CEEEEEEEEEETTTTEEEEEEEE..CTEEEEEEEEEEEEE-SSEEEEEE...-SEEEEEEEEESEEEEEEE--EEEEE-TTTTS-EEEEEEEEEEEE CS
  Oxysterol_BP  94 kgfrfiaEQVsHhPpvsAfhaes..egweldgeikvkskflgkslevkp...eGtahlellkksgehYtwtkpttivhniivgklwvelsgeveitn 185
                   + + f+aEQ+sHhP vsA+ + +  +g+e++g+ ++++ f+g+s++v+    +  ++++++++++e+Y +t+p+++v +i+ g+l +++ ++++it 
    EPX74340.1 261 HPVVFMAEQTSHHPAVSAYIVACpsKGVEIFGQDQISVGFTGTSFKVSSghlNKGVYVRFNHRDNEEYLCTHPSASVGGILRGNLHINMQDSTYITC 357
                   45679**************999988*********************98722233468999999*********************************8 PP

                   TTT--EEEEEEE---SSS---SSEEEEEEEE..............TTS-EEEEEEEETTTEEEEEETTSTTS--EEEEETT....-BSXXGCGSSTT CS
  Oxysterol_BP 186 hstgdkakleFkkkglfsskksnkvegkvkd..............kkkevlyeisGkwdeelyikkkktekkeeeedasek....skvkekeeqeef 264
                    +t  ka++++ ++++++ k +  veg+v++               ++  l++++G+w + ++++ + ++++++ +d +e     ++  + ++q  f
    EPX74340.1 358 PRTRIKAIVTYVEERWLG-KPKSLVEGVVFRydpendcydtiksvPNDCILATLKGNWRNCIFYNYAGDSESKMLVDLNELdlvhKRCPPLNKQFPF 453
                   89***************6.8999*******777888999999887778899*************9998888888888877766545999******** PP

                   BCCCCCCH-----...GGG--HHHHCCT---.TTGGS-TTBGGG-HHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHH.CCTT----SSEEEEE CS
  Oxysterol_BP 265 eseklWkasplpkaeeyygftkfavtlNeieekekslaptDsRlRpDqraleegdideAeeeKkrlEekQRerrker.eekkewkpkwFekek 356
                   es+k+W                  vt+                      ++ ++++ +A++ K+++Ee+QR++ ++r e+++ewkp++F  ++
    EPX74340.1 454 ESRKIWYP----------------VTQ----------------------NIVSKRYPQATKAKQEIEEQQRQDSAMRhESNTEWKPRFFIPDN 508
                   ********................999......................688899**********************655548******6655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (530 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       860  (0.047967); expected 358.6 (0.02)
Passed bias filter:                      527  (0.0293937); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.29s 00:00:00.90 Elapsed: 00:00:00.46
# Mc/sec: 3458.06
//
Query:       EPX74341.1  [L=295]
Description: enoyl reductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-44  151.6   8.4    2.5e-44  150.9   8.4    1.3  1  Steroid_dh  3-oxo-5-alpha-steroid 4-dehydrogenase
    3.5e-06   26.7   0.0    6.6e-06   25.8   0.0    1.4  1  ubiquitin   Ubiquitin family
     0.0043   17.4   0.2       0.01   16.2   0.2    1.6  1  PEMT        Phospholipid methyltransferase
  ------ inclusion threshold ------
      0.071   13.8   0.0       0.11   13.2   0.0    1.3  1  YukD        WXG100 protein secretion system (Wss), protein Yu


Domain annotation for each model (and alignments):
>> Steroid_dh  3-oxo-5-alpha-steroid 4-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.9   8.4   5.6e-48   2.5e-44       2     149 ..     147     294 ..     146     295 .] 0.96

  Alignments for each domain:
  == domain 1  score: 150.9 bits;  conditional E-value: 5.6e-48
  Steroid_dh   2 kmpllivakavl.fcvlnGllqarylsyyqpy.aedylkkdrlllgivlfvlgmliniksdiiLrelrkegetkykiprgglFelvsapnyfgEilewi 98 
                 +mp ++++k+++ ++vl+Gll a  +++y p+  +dy+  + + + ++ + +++l+n k +  Lr+lr+eg+ k+ ip g+ F++vs+pnyf+E+lew+
  EPX74341.1 147 TMPFRNIFKNCFhYHVLSGLLLA--FFIYGPWhSQDYICPKLFTFYTIGWTVSLLSNLKIHLELRNLRPEGSSKRAIPYGFGFNWVSCPNYFFESLEWL 243
                 89*********************..56666665999***99********************************************************** PP

  Steroid_dh  99 gyalvtkslaalaFalftvlnltvraaahhkwykkkfekYpksRkiliPfv 149
                 ++al+tks+a++ F  + ++++ v+a ++h++y k+f++YpksRk++iP++
  EPX74341.1 244 FFALITKSWASWLFLAVGFVQMLVWAQKKHQRYIKEFPNYPKSRKAIIPYF 294
                 *************************************************97 PP

>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   0.0   1.5e-09   6.6e-06       3      65 ..      12      72 ..      11      74 .. 0.92

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 1.5e-09
                EEETTSEEEEEEEETTSBHHHHHHHHHHHHTSSGGGEEEE.ETTEEE-TTSBHGGHTTSTTEEE CS
   ubiquitin  3 vktldgkkitleveesdtveelKekiaekegipaeqqrLi.ysGkvLedertleeygiqdgstl 65
                +k+l+++   le++ + ++++lKe i++++++p e++rL   +G vL   +tl+  gi  g+t+
  EPX74341.1 12 IKSLPKN---LEFPLDGSIDQLKEEISQRTRLPIERLRLStVDGTVLVPGKTLRKFGIGTGTTI 72
                6777777...9****************************549*******************998 PP

>> PEMT  Phospholipid methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.2   2.3e-06      0.01      39      90 ..     218     269 ..     189     278 .. 0.82

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 2.3e-06
        PEMT  39 mdklvtsGiYrylnnPeyvgstlgflGlaLitgsaaglllallvllvylial 90 
                 ++++ +++ +++++ P y++  l +l  aLit+s+a+ l++++ ++ +l++ 
  EPX74341.1 218 KRAIPYGFGFNWVSCPNYFFESLEWLFFALITKSWASWLFLAVGFVQMLVWA 269
                 4577799*****************************9666555555555554 PP

>> YukD  WXG100 protein secretion system (Wss), protein YukD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   2.5e-05      0.11      39      75 ..      37      73 ..      19      74 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.5e-05
                --S---TT-EEEEGGGEEEETTSBCGGGT--TT-EEE CS
        YukD 39 deagrpggwsLarvggapLsgdrtLaeagVrDGdlLv 75
                 ++ + ++++L++v+g++L + +tL ++g+ +G +++
  EPX74341.1 37 RTRLPIERLRLSTVDGTVLVPGKTLRKFGIGTGTTIW 73
                45566789*************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (295 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       516  (0.0287802); expected 358.6 (0.02)
Passed bias filter:                      311  (0.0173462); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.47u 0.28s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 1965.10
//
Query:       EPX74342.1  [L=467]
Description: glucan endo-1,3-alpha-glucosidase Agn2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     6e-100  334.7  14.2   6.8e-100  334.5  14.2    1.0  1  Glyco_hydro_71  Glycosyl hydrolase family 71


Domain annotation for each model (and alignments):
>> Glyco_hydro_71  Glycosyl hydrolase family 71
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  334.5  14.2  3.8e-104  6.8e-100       1     364 [.      47     429 ..      47     440 .. 0.93

  Alignments for each domain:
  == domain 1  score: 334.5 bits;  conditional E-value: 3.8e-104
  Glyco_hydro_71   1 VfaHfmvgntenytasdwekDiklAkaagiDgFaLNigskdswtaeqladayeaAeavg..fkLflSfDmavagawpksevislikkyashpaql 93 
                     V+aHfm+g t++y+++d+e Di++A  +g+DgFaLN+g+ dsw+ e+l+ +y+aA+av+  fkL+l  Dma++g++p+s v++++k++a +++q 
      EPX74342.1  47 VVAHFMMGLTSTYQQADFEWDINNAVGYGFDGFALNFGN-DSWMMEKLQLVYNAADAVNkdFKLYLNVDMAAMGNVPASVVTNYVKTFAYRNHQA 140
                     89************************************7.******************889**********77********************** PP

  Glyco_hydro_71  94 kvngkplvSTFeGeknaedwasiksal...........teeiffvPdfsslgaaaaaekaldvvDGlfsWeaWpkga.tnmstetDeaylsalkg 176
                     +++gk+lv TF+Ge+n++++a+ ++++           +++iff+P++  l+a+++ e + +v+DG+++W++Wp+ + t  s ++D+ yl+++++
      EPX74342.1 141 TIDGKVLVGTFAGETNTFGQANANDGWqtqvkdalassGINIFFLPSWA-LDANNIYE-THPVADGFLKWNSWPYYTgTPLSDSEDQVYLQHARS 233
                     ***************************9999999999879*********.**9****9.59**************99899*************77 PP

  Glyco_hydro_71 177 ..kpYmmpvSpwffthlgkesynknwvwrgddlwakRweqvlelqpdfveiitWNDygEShYigplkek....kaqdgsskyvegmpHdgwrdll 265
                       k+Ym +vSp++fth+++    kn+v+  + lw++Rw q+++lqpd+ ++itWNDygEShYigp++++       ++++ +v+ + H ++ ++l
      EPX74342.1 234 snKKYMGGVSPCMFTHFTS----KNFVFFYEGLWYSRWMQMIKLQPDYLQVITWNDYGESHYIGPTNNNaafpVDGSNAHDWVDAFTHVPLASTL 324
                     78***************55....*******************************************99966653444899*************** PP

  Glyco_hydro_71 266 kyyiaayKtgsk...kpaitedklvlwyRphpkkakcssgdttgnpanaelleDkvfvvallkspatvtvsvggkesetfsvkaGvnklsvpfng 357
                     +y+i++yK+g++   ++   + +l++ yR+h+k+ak+ +gd++g+p+n + ++D++ v+a+ +s+ tv+vs++g+   + +++aGv++ s++f +
      EPX74342.1 325 PYFIQMYKQGTTglpSNFHGPSTLFFTYRVHSKNAKA-TGDPIGEPQNSQNSRDEIDVIAFSSSSFTVKVSINGTVLGSANMQAGVTANSFSFVQ 418
                     **********9999888889999************99.99*************************************99***********99944 PP

  Glyco_hydro_71 358 et....Gkvkv 364
                     ++    G + +
      EPX74342.1 419 NNaavaGVPLF 429
                     43233344555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (467 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       439  (0.0244855); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 3457.77
//
Query:       EPX74343.1  [L=465]
Description: squalene synthase Erg9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-39  135.6   0.0    2.8e-39  135.2   0.0    1.1  1  SQS_PSY   Squalene/phytoene synthase
  ------ inclusion threshold ------
      0.029   14.4   0.6       0.07   13.2   0.1    1.9  2  DUF2714   Protein of unknown function (DUF2714)


Domain annotation for each model (and alignments):
>> SQS_PSY  Squalene/phytoene synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.2   0.0   3.2e-43   2.8e-39       2     262 ..      45     325 ..      44     326 .. 0.91

  Alignments for each domain:
  == domain 1  score: 135.2 bits;  conditional E-value: 3.2e-43
                 XHH-HHHHHHHTTS-HHHHHHHHHHHHHHHHHT-.-----.........------------............---------THHHHHHHHHHHT.--H CS
     SQS_PSY   2 raasksfylaslllppelRdalgalYafcreaddlvDdvseplqara.rldwwrdavdavya..........edklkpprepvlralaqlirtyk.lpk 88 
                  + s+sf ++++ lp elR+a++++Y++ r +d+++Dd +  l+++   l+ +++++++  +          +++l  +++ +  ++ +l + y+ +++
  EPX74343.1  45 DKTSRSFSAVIKALPDELREAVMLFYLVLRGLDTVEDDMTLSLEKKVpILRSFHEKIEQEGWnfeesgpnekDRELLVKFNIIISEFLKLNKGYRsIIQ 143
                 678*************************************888887779**********99999887776554899*********************** PP

                 HHHHHHHHHTS--SS-........--SHHHHHHHHHHHHHHHHHHHHHHH-S....S-H..HHHHHHHHHHHHHHHHHHHHT---SHHHHTT..S-HHH CS
     SQS_PSY  89 ellleliegmeadlef......tryetlddLeeYcyrvagvVgelclrllgar...rsd..ralaeaarrlGkalQltnilRdvpeDaergrvyLPadv 176
                 e+ +e+ egm+  ++        ++ t +d+++Yc++vag Vg  + rl+  +   + +  +++ + +++lG++lQ tni+Rd++eD + +r ++P+++
  EPX74343.1 144 EITKEMGEGMAHYATLsgkndgFSVSTVQDYDQYCHYVAGLVGIGLSRLFAESkleD-PefTNAVDISNSLGLFLQKTNIIRDYREDFDDNRHFWPKEI 241
                 ************99976666556688*************************986652.1566789********************************** PP

                 HHHHT--HHHHHHT-.-SHHHHHHHHHHHHHHHHHHHHHHHTGGGS.-HHHHHHHHHHHHHHHHHHHHHHHTTT-TTT------HH CS
     SQS_PSY 177 lkefgvseedllrkgvrsaelrallrrlaerArelldearellkqlpdrrarpalllavalyrailerieaadydvlsrrvklsll 262
                 + ++  +  +  + + +s+++  +l +++++A  +  +a  ++++l+++++  +++++ +++ a+l  + +++   ++  vk++++
  EPX74343.1 242 WSKYVTNFGEFCQPE-NSEKALTCLSEMTANALTHATDALSYIASLQNQKVFNFVAIPQVMAIATLSTVFRNPTM-FQANVKIRKG 325
                 *99988889998877.6666*****************************************************96.6788888875 PP

>> DUF2714  Protein of unknown function (DUF2714)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   7.8e-06      0.07      65     115 ..      84     136 ..      77     146 .. 0.84
   2 ?   -3.7   0.1       1.2   1.1e+04      14      36 ..     388     410 ..     388     424 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 7.8e-06
     DUF2714  65 rfsskklvPiviek.essnveainlss.sndeklnkflkslNklikkllekkk 115
                   s +k vPi+ +  e+ ++e  n+ +   +ek +++l ++N +i ++l+ +k
  EPX74343.1  84 TLSLEKKVPILRSFhEKIEQEGWNFEEsGPNEKDRELLVKFNIIISEFLKLNK 136
                 568999*****986599********996789******************7655 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 1.2
     DUF2714  14 yeklinsvlLksnlgfsseiykk 36 
                 y+k++++ l++ + g+  ++  k
  EPX74343.1 388 YDKVFSEKLFQEKKGNTKDESAK 410
                 78888888888877766665544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (465 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       826  (0.0460706); expected 358.6 (0.02)
Passed bias filter:                      527  (0.0293937); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 3262.63
//
Query:       EPX74344.1  [L=558]
Description: poly(A) polymerase Pla1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   3.1e-109  363.7   0.0   4.6e-109  363.2   0.0    1.3  1  PAP_central   Poly(A) polymerase central domain
    3.3e-62  209.1   0.5    6.3e-62  208.2   0.5    1.5  1  PAP_RNA-bind  Poly(A) polymerase predicted RNA binding domain
    2.3e-11   43.8   0.4    6.1e-11   42.5   0.0    1.9  2  NTP_transf_2  Nucleotidyltransferase domain
  ------ inclusion threshold ------
       0.12   12.5   0.0       0.53   10.4   0.0    2.1  2  Polbeta       Polymerase beta, Nucleotidyltransferase
       0.14   12.0   0.6       0.49   10.1   0.1    2.2  3  Nrap_D2       Nrap protein PAP/OAS-like domain


Domain annotation for each model (and alignments):
>> PAP_central  Poly(A) polymerase central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  363.2   0.0  1.3e-112  4.6e-109       1     248 []       7     350 ..       7     350 .. 0.99

  Alignments for each domain:
  == domain 1  score: 363.2 bits;  conditional E-value: 1.3e-112
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........................................ RF
  PAP_central   1 GvtepislakptekdlklteeLieeLkeqnlfeseeetkkreevlekleklvkefvkk........................................ 58 
                  G+t+pis+a++te++++l+++Li+eLk+qnlfes++e+++r +vl+ l+++++efvkk                                        
   EPX74344.1   7 GITPPISTAPATEQENALNTALIDELKRQNLFESSAESERRIKVLDDLQRIATEFVKKvslakhmnekmaneaggkiftygsyrlgvygpgsdidtll 104
                  9************************************************************************************************* PP

                  ........................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PAP_central  59 ........................................................lkevpedldlkddslLknldekevrslnGvRvtdeilrlvpn 100
                                                                          +++vp++l+l+d++lLk+++e+++ slnG+Rvtd+il+lvpn
   EPX74344.1 105 vvpkhvsrenffqdlepmlrereeitelasvpdayvpiikfkyfdisidlifarlsVPKVPRTLELSDNNLLKGVEERCILSLNGTRVTDQILQLVPN 202
                  ************************************************************************************************** PP

                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PAP_central 101 ketFrlaLraiklWAkrraiysnvlgflgGvawAllvariCqlyPnaaastlvskfFlvlskWkwpqpvlLkeieekeeplrvWdpkvnksdrahlmp 198
                  +++F++aLra+k+WA+rraiy+nv+gf+gGvawA++variCqlyPna++s++v kfF++l++W+wpqp+lLk+ie+   ++r+W+pk+++sd+ah+mp
   EPX74344.1 203 RAVFKHALRAVKFWAQRRAIYANVIGFPGGVAWAMMVARICQLYPNAVSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYPSDKAHRMP 300
                  ****************************************************************************665699**************** PP

                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  PAP_central 199 iitpaypsmnstynvsrstlevlkeelkrgleiteeiesgkakwekLfek 248
                  iitpaypsm++t+n++ st++++ +e+ r+ ei+++i+ g+  w++Lf+k
   EPX74344.1 301 IITPAYPSMCATHNITPSTQAIILSEMVRAGEIADQIMVGSVGWSALFQK 350
                  ************************************************86 PP

>> PAP_RNA-bind  Poly(A) polymerase predicted RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  208.2   0.5   1.8e-65   6.3e-62       1     170 [.     352     533 ..     352     534 .. 0.93

  Alignments for each domain:
  == domain 1  score: 208.2 bits;  conditional E-value: 1.8e-65
  PAP_RNA-bind   1 tFFskYkyYLsvvassktkeaqkkWsglVESkvRlLvqkLeavesialahpfnkgfervheckteeeleevqegslkslvkeekea..........s 87 
                   +FF++Yk+YL+++a+skt+e q+kWsglVESk+R+Lv++Le ve ialahpfnkgf++ h+ck+eee+++ ++g    +++++++           +
    EPX74344.1 352 DFFHRYKHYLMITAASKTAEGQLKWSGLVESKLRHLVTRLELVEAIALAHPFNKGFDKIHNCKSEEEAHQLASGISLDVASQTADLerlaadangqN 448
                   7*********************************************************************77776555555555546999**99988 PP

  PAP_RNA-bind  88 eekeeeeeeeskevytttfYIGLeleekaks..kkldlsypvqeFkelckswekykeelmsltvkhvknfdLpddVfeegekrpk 170
                   e+++e+ee++   vytttfYIGLele+k+ +  kkld+s+p qeF+elck+w++y+e+  ++ +k+++n++Lpd+Vfe+ge++pk
    EPX74344.1 449 ENEDEKEEKKIYPVYTTTFYIGLELEKKKGQpiKKLDISWPAQEFYELCKKWDRYDETQVNVFIKNTRNVNLPDEVFEPGEEKPK 533
                   8888888889999****************99****************************************************97 PP

>> NTP_transf_2  Nucleotidyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.5   0.0   1.7e-14   6.1e-11       9      87 ..      76     153 ..      67     161 .. 0.73
   2 ?   -3.3   0.1       3.3   1.2e+04      47      75 ..     456     489 ..     448     507 .. 0.53

  Alignments for each domain:
  == domain 1  score: 42.5 bits;  conditional E-value: 1.7e-14
                   HHHTTTSEEEEEHHHHCTTSCTTSSEEEEEEESTTCHHHHHHEHHHHHHHHCCCEEECTTEEEEEECEEECCCCTEEEE CS
  NTP_transf_2   9 kelepvakvvlfGSyarGtalkgSDiDllvvlpeevsrekkeegleklaeiikfleellglevdlvtrekledpllvks 87 
                     +  + k++++GSy+ G +++gSDiD+l+v+p++vsre+ +  le   ++++++ el  ++   v++ k++  +++++
    EPX74344.1  76 ANEA-GGKIFTYGSYRLGVYGPGSDIDTLLVVPKHVSRENFFQDLEPMLREREEITELASVPDAYVPIIKFKYFDISID 153
                   4333.89********************************5555555555566666666888888888888775555555 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 3.3
                   H....HHHEHHHHHHHHCCCEEECTTEEEEEE.C CS
  NTP_transf_2  47 e....kkeegleklaeiikfleellglevdlv.t 75 
                   e    +++++++++  + ++ + ++  + d++ +
    EPX74344.1 456 EkkiyPVYTTTFYIGLELEKKKGQPIKKLDISwP 489
                   2445544455555555555555556666666653 PP

>> Polbeta  Polymerase beta, Nucleotidyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.77   2.8e+03      39      68 ..      38      69 ..      36      80 .. 0.70
   2 ?   10.4   0.0   0.00015      0.53      15      52 ..      82     116 ..      69     145 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.77
                ESS---HHHHHHHHHHHHHH...SSSEEEEEE CS
     Polbeta 39 lkekldleeelelaaeledi..klgkkvDlvd 68
                ++++ + e+++++ ++l++i  +  kkv l +
  EPX74344.1 38 FESSAESERRIKVLDDLQRIatEFVKKVSLAK 69
                56667788899999999999665556666554 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00015
                 STTEEEEEE-S------EEEEEEEESS-...--HHHHHHHH CS
     Polbeta  15 laylFGSrakgkareeSDiDlavllkek...ldleeelela 52 
                  ++ +GS+  g + + SDiD  +++ ++   +   +   + 
  EPX74344.1  82 KIFTYGSYRLGVYGPGSDIDTLLVVPKHvsrE---N---FF 116
                 5788****************888888873441...2...22 PP

>> Nrap_D2  Nrap protein PAP/OAS-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0         1   3.7e+03      94     117 ..      17      40 ..       9      49 .. 0.75
   2 ?   10.1   0.1   0.00014      0.49       2      58 ..     206     252 ..     205     286 .. 0.72
   3 ?   -3.0   0.0       1.6   5.7e+03     100     114 ..     506     520 ..     499     524 .. 0.75

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1
                 -.--SS...--EEETTT--BTTTT CS
     Nrap_D2  94 eeefskafepvlvdpsgklNllak 117
                  +e ++a + +l+d+ ++ Nl+ +
  EPX74344.1  17 ATEQENALNTALIDELKRQNLFES 40 
                 445567888999999999999876 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00014
                 HHHHHHHHHHHHHHTT--SS--T.S-S-SHHHHHHHHHHHTSBBSTTS-BSS-TT--H CS
     Nrap_D2   2 fkdAclLlkvWlrqRgfgssirk.aggfggfewamllalllqgggkkgrkklskslss 58 
                 fk A+  +k W+++R +    ++ +g  gg+ wam++a + q         +++ +ss
  EPX74344.1 206 FKHALRAVKFWAQRRAIY---ANvIGFPGGVAWAMMVARICQ--------LYPNAVSS 252
                 8999999***********...3458899***********994........33333333 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 1.6
                 ...--EEETTT--BT CS
     Nrap_D2 100 afepvlvdpsgklNl 114
                 +   v++ +++++Nl
  EPX74344.1 506 TQVNVFIKNTRNVNL 520
                 455799999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (558 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       546  (0.0304535); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.55u 0.29s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 3688.47
//
Query:       EPX74345.1  [L=463]
Description: glutamyl-tRNA amidotransferase alpha subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   9.1e-106  354.5   0.0     1e-105  354.3   0.0    1.0  1  Amidase   Amidase


Domain annotation for each model (and alignments):
>> Amidase  Amidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  354.3   0.0  5.7e-110    1e-105       1     451 []       4     456 ..       4     456 .. 0.92

  Alignments for each domain:
  == domain 1  score: 354.3 bits;  conditional E-value: 5.7e-110
                 HHHHHHHHHHHHHHHHH--EEEEEHCCCCHHHHT---TTT......TTTT-EEEEETTB--TTSB--TTSGGGTT-B-SS--HHHHHHHHTT-EEEEEE CS
     Amidase   1 elveaflkrieavneklnalvtvfieealaqAakldkkrargkekgpLhGvPisvKDnidvkgvpttaGskalenypaekDatvverLkkaGavilgkT 99 
                 elv+++l+ + + + k+n+   + + +a ++  +l++ ++++  + pL    ++vKDn+++  +pt++Gs+ l +y+++++at+v+ Lk++G +i+gkT
  EPX74345.1   4 ELVKKCLSAVLK-DAKVNS--LTSFHTADSIKHSLKELATKNARDLPLNNRILTVKDNLCTNYWPTSCGSRYLSDYISPFEATLVKTLKENGGIIIGKT 99 
                 677888885555.889994..4445666667777777777889******************************************************** PP

                 --SGGG-SSSSTT-TT---BBTTCTCC....B--SSSHHHHHHHHTTSSSCEEEEESSSTTHHHHHHCTSEEEE--TTSC--TTB--SSTTT-EEEEEE CS
     Amidase 100 nmdefamgsstensvfgptrNPwdksr....tpGGSSGGsAAavAaglvplaiGtDtGGSiRiPAsfcglvGlKPtygrvSragvvalessldvvGpla 194
                 nmdefamg+st+n ++g+t+  +++++     +GGSSGGs A vAa+++ ++iGtDtGGS+R+PA++ g++G+KP+ygr+Sr+g v++++s+d+ G++a
  EPX74345.1 100 NMDEFAMGTSTNNALYGQTVFQLSEDKdklyQVGGSSGGSSASVAADICYASIGTDTGGSVRLPAAYIGCIGFKPSYGRISRYGAVPFANSMDTMGIMA 198
                 ********************999888777889******************************************************************* PP

                 SSHHHHHHHHHHHBS--TT-TTS----...HHHHHHHHCTT---TT-EEEEEGGGCSS---CCHHHHHHHHHHHHHCTT-EEEEEE-CCGGGHHHHHHH CS
     Amidase 195 rsvedlalllrvilgedpkdstssvip...eesedlaeelkkslkglriGvvkedgvasldpevqravekalkaLeeaGhevvevelpsleealslyyl 290
                 ++ + +  +++ + + dpkd t+++     + +++ + + k+++ +  iGv+++ +v+++d+ev    ++++  L++ Gh ++ev+lps  + +s+y+ 
  EPX74345.1 199 KDFDGITSVFDLLNRTDPKDATCLSEKmrmKIDRHCQ-KYKNHETPSIIGVPTDWNVVEMDNEVLSKWNEFISLLKSRGHLIKEVHLPSSLYGVSIYTS 296
                 ***********************98667544444444.4445558889*************************************************** PP

                 HHHHHHHHHTTT-SSSSS---SS-SCCCCCCCHHHHCCS-HHHHHHHHHHHHHCSCCCCCCCHHHHHHHHHHHHHHHHHHCCC...........BSEEE CS
     Amidase 291 ilvaeassnlarylgvryerlsetkvlsellpksraellgeevkrrielgnyalsaeasskyylkaqkvrrllrrefakafee...........lDvll 378
                 +++ae++snlary +  + ++s++k  +el   +r++++geevk r+ lg+y ls++++  +y+kaq  rr++++ef++ f+            +D+++
  EPX74345.1 297 LAYAEGASNLARYNNSIFGPISQDKR-HELS--PRSANFGEEVKKRLLLGAYSLSSGKKIGFYRKAQLLRRAVQKEFNACFRIpslhaldpsgdIDFIV 392
                 ***********997776666666655.5555..599*********************99999************************************* PP

                 EESSSSS--BCCCCCHHHCSHHHHHGCCTTT...HHHHHTT--EEEEECCCCT.TECEEEEEEESTT-HHHHH CS
     Amidase 379 sPtaptpaprlgekdktidsytvlynlldftavvvpvnlaglpalsvpagksedglPvGvqvigkafqeetlL 451
                 +P++ +p +++g k+      ++ ++++ ++   vp+nlaglp++s+p+g+  +glP G+q+i+++++++ lL
  EPX74345.1 393 TPSFLKPSMPIGSKT------SSDFLSDSML---VPANLAGLPSISIPFGQVHNGLPMGIQLISQYGDDNSLL 456
                 ************996......688999****...************************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (463 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       413  (0.0230353); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.29s 00:00:00.83 Elapsed: 00:00:00.45
# Mc/sec: 3095.63
//
Query:       EPX74346.1  [L=1272]
Description: complexed with Cdc5 protein Cwf11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-49  167.3  10.3    2.5e-48  164.8  10.3    1.9  1  Aquarius_N  Intron-binding protein aquarius N-terminus
    1.3e-08   34.7   0.0    3.7e-08   33.2   0.0    1.7  1  AAA_12      AAA domain
  ------ inclusion threshold ------
      0.039   13.7   0.0      0.073   12.8   0.0    1.4  1  AAA_11      AAA domain


Domain annotation for each model (and alignments):
>> Aquarius_N  Intron-binding protein aquarius N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.8  10.3   4.2e-52   2.5e-48      14     722 ..      19     678 ..      12     718 .. 0.85

  Alignments for each domain:
  == domain 1  score: 164.8 bits;  conditional E-value: 4.2e-52
  Aquarius_N  14 WlkkkkskkkkvkpevvkkilkeelekekfslkslllLevlqyLEkyLwpnytedasnahvllivlmvnekfrerleawelfedrpeefsslfrrvlsl 112
                 W    k+++k+++  ++++i+ +el +ek s+  l+ L+ + + E  Lwp+ t+d    hv li+lm+ +k+    +       +p++f+ lf +v+ l
  EPX74346.1  19 WG---KEHQKQYDVGMLENIY-SELLNEKNSIDLLSFLDDSAFFETCLWPTVTNDMPLVHVQLICLMILHKTSSYPSFL--KDLDPSKFKILFDQVIIL 111
                 54...478999********88.88889999**************************************99976544333..34479************* PP

  Aquarius_N 113 sldeslslkertallvFlinaFqSleselvrkevaklvslsiWhnL.seekreeelekspklkkawralkkkydkadeatkaklrfersflyklildfl 210
                 s +e+l  ++   l+ F++ + +Sl +  v+k + +l +++i  +L s+ekr++ ++k ++++ka+ + k+k+    + ++ +      +l++++l++ 
  EPX74346.1 112 SYNENL--HNSFCLVRFITLCIESLHVPHVKKLIYPLTNIAILDCLeSQEKRDHVFTKVKAFRKAYVSYKQKQPGILK-ENPNHGAYSGWLHQILLKCD 207
                 998776..56789******************************************************99999888777.5566677789********99 PP

  Aquarius_N 211 evleeaeeegeleeekvlyceRflelliDLesqLptRRyvntllkdlhllvairlsklvkdeegklfrqlldlLkfYtkFeiddqtgeqlseeevteah 309
                  +l+++++e++     ++     l l   + s +ptRR+ + +++d  + +  r+s  +++++  lf+ l+d L+   +++ d+ +g  lse+e+ ++ 
  EPX74346.1 208 LLLQDSADETN-----LRPSLTVLGLCLAFLSTFPTRRFSHLIIEDACFDAFSRTSLFYHTSA--LFKSLTDSLRRSLRYPYDNAKGIDLSEKEIIQRD 299
                 99999876644.....4445567777778889***************9999999998888776..********************************** PP

  Aquarius_N 310 yaklakLqrvalkkfkekLkelaLsnvgsidkreeLekhleaLsdeeleelaallklrtskkpesekleadrkfllevlvskfek..rksqqeainel. 405
                     ++Lq + ++ ++++L+++ +   +  +kre+Lek    L+ +el+ l+++ +lrt+  +e+  +++++++l e+ +s+fek  ++s++++ ne+ 
  EPX74346.1 300 ELLYHSLQTTLFRFYQDRLHDFLFFPQSWFQKRENLEKITGCLTFDELKGLCQKCHLRTN-FTETYPIKVSHSLLKEIYISTFEKiqQNSFLKSSNEIi 397
                 *********************************************************999.9999999****************854678999999862 PP

  Aquarius_N 406 pllPtekvlfdenlvrsesydgerpLalpKLnLQfLtlgDyLlRnfnLfrlEstYeirkdiedavkrlkpklkeegetsfeGfsrmalpiskfaiveva 504
                  +  ++   +++++++ ++ +            Q L+++ +L + +     + + e+ ++i +a ++   k       +++ fs   +pi+kf i  +a
  EPX74346.1 398 HITLDDLNFWERKVTEIQNLKIP-FNDFQGYQFQNLSISSFLQKTLDALYGDLLKEVSNEISSACNHNLLK-----GNEIKRFSSAFTPIKKFRIQKTA 490
                 67778889999999998887665.4468889999**********997666777778888887777664433.....34578899999************ PP

  Aquarius_N 505 kpkvGekkPsaVraevtldlsrlkeevrreWesLrkhDvvFLlavrpkkelgekekkkkgekssfaeklglkavRgaevievldeegrvleeaekkege 603
                 +p vGe +P +++ +v +d  + + ++    +++rk+  v Ll++ ++k    ++++ +           ++   g   ++ +d+eg+ +++++     
  EPX74346.1 491 PPLVGEIHPQYIHCKVDIDT-EKRIDI---FDKIRKNKFVCLLSIANHK----EQRSFQ----GSG--SCINLAFGRPFTSQVDAEGNEVKDNS----- 570
                 *******************9.444444...89*************8887....333343....333..444555566789999****9999933..... PP

  Aquarius_N 604 ekrpkgekrtlrvkLDaaqYkaDlekaakgkedvYetlNvlvRRkakeNn.FkavLetirdLmnsdvvvpdWLhdvfLGYGdPaaAtYkklpnrlktvd 701
                        ++++ + +D+  Y+  +ek +   ++    +N ++  ++   + +  +L+  r L+++    p+WL d fLG+G P+  t+ ++ ++   + 
  EPX74346.1 571 -------SKNMDIYMDPLFYSDVVEK-EGMFPEA-MDFNYMMTVSSSVKDiWSEILA-NRLLLKKAGNFPKWLLDCFLGFGAPNLVTFPNVGSNN--IT 657
                 .......46789*****998755554.4444555.5799999877765551555665.59999***************************99865..56 PP

  Aquarius_N 702 frDTFldwqHliesfpgkkve 722
                  +D F + + l e fp+ + +
  EPX74346.1 658 VKDVFSSNEQLEEVFPNADRN 678
                 69**************97654 PP

>> AAA_12  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.2   0.0   6.3e-12   3.7e-08      16     168 ..    1027    1177 ..    1016    1205 .. 0.81

  Alignments for each domain:
  == domain 1  score: 33.2 bits;  conditional E-value: 6.3e-12
      AAA_12   16 kvvlLdtqYRmhpeIsrfpsklfYkgkLkdaesvkkreleaqealeepleplvfidv...ekseeekekkeksyiNeeEaelvvklvekllkkgsee 109 
                    + L+t Y  +++I ++  ++ Y+ +++  +++ ++ +   +  +   +++ fidv   ++ +e++ + e s+ N  Eae  v +++++   g+ +
  EPX74346.1 1027 FCHQLKTKYNTRKSIGELT-DWQYGTEIEYVDTTDTSVSL--HGNSGFVNEYQFIDVgpfKGAKETEIT-EGSKQNLGEAEYAVAIYQYMRMLGYPA 1119
                  568899***********86.6789***9998877766655..566777788*****9665555555554.49****************999999999 PP

      AAA_12  110 erkkigvitpYraqvellkkklkekeeekseke..ievntvdgfQGrekdviilslVRsne 168 
                    ++ig+ t Y +qv ll++ l+ + + +s     + vn v +  Gr  +++i+++V s+ 
  EPX74346.1 1120 --DEIGICTLYDSQVALLREILNVRCSGNSFFGlpLLVNNVKNL-GRHVKYMIFTTVSSEG 1177
                  ..9********************888887554488999999987.9***********9973 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   1.2e-05     0.073       2      71 ..     715     776 ..     714     791 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.2e-05
      AAA_11   2 lndsqreaiksalseseitliqGPPGtgKTktivellsqllsrrkseeeksakpriLvCapSNaAvDell 71 
                 +nd+q  a+ + l+    tl++GP  tgK   ++++l+ l        ++ +++r L+ +  N + ++l 
  EPX74346.1 715 YNDEQCSALLNSLQPGL-TLVHGPSQTGKHALVCKVLEIL-------SRNFQNERTLIVSKENDSLNKLF 776
                 79***********9885.********************99.......35788888898888888877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1272 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       627  (0.0349713); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.87u 0.31s 00:00:01.18 Elapsed: 00:00:00.50
# Mc/sec: 7597.95
//
Query:       EPX74347.1  [L=2338]
Description: phosphatidylinositol kinase Tor2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   3.3e-121  404.7   8.7   8.2e-121  403.4   8.7    1.7  1  FAT             FAT domain
    1.2e-72  244.7   0.0    2.3e-72  243.8   0.0    1.5  1  PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
    2.1e-63  213.0  11.8    5.2e-63  211.8   0.4    4.7  4  DUF3385         Domain of unknown function (DUF3385)
    1.1e-44  150.8   1.3    2.7e-44  149.6   0.1    2.4  2  FRB_dom         FKBP12-rapamycin binding domain
      6e-15   54.8   1.7    1.5e-14   53.5   1.1    2.2  2  FATC            FATC domain
    3.6e-13   48.5  18.2      0.025   14.8   0.1   12.6 12  HEAT            HEAT repeat
    1.9e-11   44.2   7.7      0.025   15.0   0.0    8.4  7  HEAT_2          HEAT repeats
    2.8e-09   37.3  15.7     0.0033   17.9   0.0   12.4 13  HEAT_EZ         HEAT-like repeat
    0.00014   22.4   1.7        1.8    9.2   0.0    5.8  5  Vac14_Fab1_bd   Vacuolar 14 Fab1-binding region
     0.0033   17.5  10.3        1.7    8.6   0.2    6.0  5  Cnd1            non-SMC mitotic condensation complex subunit 
  ------ inclusion threshold ------
      0.016   15.4   4.4        9.6    6.5   0.0    4.3  4  ANAPC3          Anaphase-promoting complex, cyclosome, subuni
       0.02   14.2   0.2       0.19   11.0   0.0    2.6  2  BAF250_C        SWI/SNF-like complex subunit BAF250/Osa
      0.038   14.5   1.3         36    5.0   0.0    4.6  4  TPR_19          Tetratricopeptide repeat
      0.061   12.9   5.7        1.1    8.8   0.0    4.7  5  CLASP_N         CLASP N terminal
      0.088   12.9   2.1         14    6.0   0.1    3.4  2  TPR_7           Tetratricopeptide repeat
       0.12   11.4   4.6         13    4.8   0.4    4.4  6  IFRD            Interferon-related developmental regulator (I
        7.7    6.9   9.3         18    5.8   0.4    4.2  4  TPR_2           Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> FAT  FAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  403.4   8.7  7.8e-124  8.2e-121       1     346 []    1363    1710 ..    1363    1710 .. 0.95

  Alignments for each domain:
  == domain 1  score: 403.4 bits;  conditional E-value: 7.8e-124
                  CCCTTCCCCTSSSGHHCCCCT....TSSSS--CCCHCCCCHH--CCHCHHCCCHCCCCCCCCCTS---SCCCCCHHHHHCCCCCHHHCHHCCHHCSS CS
         FAT    1 aplaaeaaWrlgqWdsmeeylsvlkkdspdkaffeailalhrnqfdeakeliekarqlldtelsalvgesynraygvlvrvQmlaEleeiiqykqkl 97  
                  apl+++aaW+lgqW++m+ey+sv+k++spdkaff+ai+alhr qf+ea+++i +ar+lldtel+alv esynray+v vrvQml+Eleeii+yk+++
  EPX74347.1 1363 APLSVAAAWGLGQWEQMDEYISVMKSESPDKAFFSAIVALHRLQFEEASAHITRARDLLDTELTALVAESYNRAYSVAVRVQMLSELEEIISYKKAE 1459
                  79*********************************************************************************************** PP

                  ----TTTTTTT----TTS-TTTGCCCTTTCCCCTCCCHCCCHCHCCS-STTCCCCCCCCHCHHHHCCSTTHHCCCCCHCTT.........TT.TSSC CS
         FAT   98 ssseklksllktWrkRlpgcqdnvevwqdiltvRslvlspiedllkgvkaemwlkfanlarksgrlslAekaLkelleedp...eewlp.rappevv 190 
                  ++++ ++ ++ktW +Rl+gcq+nv+vwq++l++Rslv+sp+e+      +emw+k++nl+rksgr++lA+k+L  lle ++    + lp +a+p ++
  EPX74347.1 1460 NKPHVREVIKKTWIRRLKGCQRNVDVWQRMLRIRSLVISPKEN------MEMWIKYSNLCRKSGRIGLAKKSLDLLLEDENhleGNVLPkNAHPSII 1550
                  *******************************************......***************************9999988866666899***** PP

                  CCHHHHHHHCCHHHHHSSCCHHHHCCTSSCCCSS-SS---...................HHHHCCCTCCCCCCCCCCCT.S...-SSCCHHHHCCHH CS
         FAT  191 yaylKylwssgeqkealqkLreftsellekkeelqsgleaq.......keptnleeftkllarcylkkGewqealqkldwseekieeilqsysaate 280 
                  ya+lK++w+ +++k al +++eft +l+++ + +  +l aq       k+++++ ++  llarcy+k+G+wq++++  +wse  +  +lqsy  at+
  EPX74347.1 1551 YAKLKFSWTVDDKKRALVNMQEFTAQLISDIN-IDPALFAQsaitgsqKSQEEIHYYFHLLARCYHKQGQWQQEIEP-KWSEGLFTRVLQSYMYATQ 1645
                  ******************************75.44444444566666899***************************.9****************** PP

                  CTCCCHSTTCCCCHHHHHCCHHHHHHSSSS.S-TCCHHHHCCT..CCHHHHTTTSSTTTCHHHHHC CS
         FAT  281 idpswykawhtwalfnfevvskeeeqkeeeepedlqeyvvpavkgflksislssenslqdtlRLLt 346 
                  +d +wykawh+wal+nf +++++e++++++    +++y++pa+kgf+ksi+ls++ + qdtlRLL+
  EPX74347.1 1646 FDSKWYKAWHSWALANFDAIKHLEQSEDNIPLGAYEQYIIPAIKGFFKSIALSKG-NIQDTLRLLS 1710
                  **************************9999777777*******************.899*****95 PP

>> PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  243.8   0.0   2.2e-75   2.3e-72       2     249 ..    1984    2232 ..    1983    2233 .. 0.98

  Alignments for each domain:
  == domain 1  score: 243.8 bits;  conditional E-value: 2.2e-75
                      EEEEEECSSCHHHHHHHHHHHHHHHHHHHHTTTTCCCT-------EEESSSSEEEEE--TTEEEHHHHHHHHHHHCTTSTCHHHHH.HHHHCH CS
  PI3_PI4_kinase    2 sagiykvgddlrqdelivqvfklmdeelskennpkrrklalktysviplgrkcgiielvassetaaslldeklekkgvpptasves.lrvald 93  
                      +++++k+++d rqde+++q+f+l++++ls++ ++ +r l++++y vipl++++g++++v  s+t++ l++ ++e +++  +++++   ++a+d
      EPX74347.1 1984 YQYLLKGHEDIRQDERVMQLFGLCNNLLSADPETFKRLLSIQRYPVIPLSPDSGLLGWVLDSDTLHVLIRDYRESRKILLNIEHRLiIQMAPD 2076
                      78999**********************************************************************988888888888888*** PP

                      CHCCHHHHHCC.HHHHHHTSSTTHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHT-TT--TTTEEEETTTSEEEESSTTTCCTCSHC CS
  PI3_PI4_kinase   94 kkklkkekklk.fekrtalkpksgllqeFvkkspsaeewlearkqFvrslaklsvldyilgngDRhldNilvdktsgklihIDfGlilpdewk 185 
                      +++l +++k++ fe   + ++ ++l++ ++ ks s e+wl++r+++ rsla++s+++yilg+gDRh++N+++d+ +g++ihIDfG++++ +++
      EPX74347.1 2077 YDRLSLLQKVEvFEYALMSTTGQDLYRVLWLKSRSSEAWLNRRTNYSRSLAVMSMVGYILGLGDRHPSNLMLDRYTGNIIHIDFGDCFEVAMH 2169
                      ********************************************************************************************* PP

                      SSSS-.SSSSSS-THHHHHHTSTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCCSSC CS
  PI3_PI4_kinase  186 llpfpqekvPfrltrelvlaidpskdeglfresceealealrrdqnlltrllkkavkdglilwe 249 
                      + +fp ek+Pfrltr+lv+a++ s+ eg+fr +ce+++++lr +++ ++++l+++v+d+li+w+
      EPX74347.1 2170 REKFP-EKIPFRLTRMLVNAMEVSGIEGTFRITCEHVMRVLRDNKESVMAVLEAFVHDPLINWR 2232
                      *****.*********************************************************7 PP

>> DUF3385  Domain of unknown function (DUF3385)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.5     0.075        79      57     137 ..     262     343 ..     245     366 .. 0.61
   2 ?    1.8   0.1       0.2   2.1e+02      74     156 ..     631     715 ..     566     717 .. 0.58
   3 !  211.8   0.4   4.9e-66   5.2e-63       1     161 []     722     880 ..     722     880 .. 0.95
   4 ?   -0.1   0.1      0.74   7.8e+02      87     157 ..     970    1038 ..     942    1041 .. 0.58

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.075
     DUF3385  57 krreeaaretdlsllmvglspsn.eeyypt...vvinaLlrilkdpslsshhaavveaimnifktlglkcvpfLdqiipallsvi 137
                 k++ ++   +++++l+ ++s+ n ee+ +    v +  Ll++lk++  +     + +++ +i   +  + vp+Ld i+ a+ + +
  EPX74347.1 262 KDHRDSLIRKTVTELIATISTYNpEEFVSNylhVCMLHLLNLLKKERARM---LAFSTLGKIAVAITNSIVPYLDPICAAIKESL 343
                 44555555566777777888888788866644477777777777777665...45555555555566688999999988876643 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.2
     DUF3385  74 glspsneeyyptvvinaLlril....kdpslsshhaavveaimnifktlglkcvpfLdqiipallsvirtteesnlrefllqqLatL 156
                  l ++    +++  +  +l+il    kd+s  s  a++v++   i++  g   ++f + ++p ++ +++++++   r   l+ L++L
  EPX74347.1 631 LLISAAPKLIES-HVGPILQILvpkaKDSS-PSVAANIVNSFGEICQISGDTILTFKKDLMPLIIDALQDQSSPVKRAASLRTLGNL 715
                 333333444444.33445666666545555.45889999999999999999999999999999999999888777777777777665 PP

  == domain 3  score: 211.8 bits;  conditional E-value: 4.9e-66
     DUF3385   1 VvdPyleypqLLelLlnilkteqsqsirrevikllGilGALDPykhkqveeraedkkrreeaaretdlsllmvglspsneeyyptvvinaLlrilkdps 99 
                 V+dPyleyp+LL++L++i+kteq+ sirre+ikl+G+lGALDP +h+++e+ +e+    e+++  +d+sllm g+ ps+eeyyptvvi+aL++ilkdps
  EPX74347.1 722 VIDPYLEYPSLLDILVGIIKTEQDISIRRETIKLIGTLGALDPNRHQVLEKGTEK-LVPEQKNIPSDISLLMSGIGPSSEEYYPTVVITALMSILKDPS 819
                 9*********************************************988865555.5567778889********************************* PP

     DUF3385 100 lsshhaavveaimnifktlglkcvpfLdqiipallsvirtteesnlrefllqqLatLvsivk 161
                 ls hh+av++a+m+ifkt+gl+c pfL+qiip+++ v+rt+++ n++ef++qqL++Lv iv+
  EPX74347.1 820 LSIHHTAVIQAVMYIFKTMGLRCAPFLSQIIPEFIAVMRTSPS-NILEFYFQQLSILVLIVR 880
                 ***************************************9877.****************97 PP

  == domain 4  score: -0.1 bits;  conditional E-value: 0.74
     DUF3385   87 vinaLlrilkdpsls.shhaavveaimnifktlglkcvpfLdqiipallsvirtteesnlrefllqqLatLv 157 
                   + +L+r+ + + +s + +++v+ +i    +   ++   + ++ii+ +++++++ ++ +l  + l+ L+ L+
  EPX74347.1  970 LLGSLMRLYERQDVSlDVRENVMITIGRLSTV--INISDYASRIIHPIMRTLSSGAP-SLVRVSLNTLCALI 1038
                  44445555544444423333333333333222..33345666666666666666665.66666666666665 PP

>> FRB_dom  FKBP12-rapamycin binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.2         8   8.5e+03      10      24 ..    1296    1313 ..    1285    1321 .. 0.62
   2 !  149.6   0.1   2.5e-47   2.7e-44       1      99 []    1817    1915 ..    1817    1915 .. 0.99

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 8
     FRB_dom   10 hElwhegL...eeAsrly 24  
                  +E+w+e L   e+A ++y
  EPX74347.1 1296 KETWYEKLqrwEDALAAY 1313
                  677777774334444444 PP

  == domain 2  score: 149.6 bits;  conditional E-value: 2.5e-47
     FRB_dom    1 ELiRvAilwhElwhegLeeAsrlyfgeknveamlklleplhellekgpetlreasFaqafgreLkeaeewlkkykkteneedlnqawdiyyevfrri 97  
                  ELiR+AilwhE+whegLeeAsrlyfg++n+e+m+++l+plhe+le+gpetlre+sF+qafgr+L ea++++ ++++t++++dlnqawd+yy+vf++i
  EPX74347.1 1817 ELIRAAILWHEQWHEGLEEASRLYFGDHNIEGMFAVLRPLHEMLERGPETLREISFQQAFGRDLIEARDCCIRFEQTGDISDLNQAWDLYYQVFKKI 1913
                  9************************************************************************************************ PP

     FRB_dom   98 kk 99  
                  +k
  EPX74347.1 1914 RK 1915
                  86 PP

>> FATC  FATC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0         9   9.5e+03      12      22 ..    2071    2081 ..    2068    2082 .. 0.81
   2 !   53.5   1.1   1.4e-17   1.5e-14       2      32 .]    2308    2338 .]    2307    2338 .] 0.98

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 9
        FATC   12 IkeATdpeNLa 22  
                  I++A d + L+
  EPX74347.1 2071 IQMAPDYDRLS 2081
                  7*****99997 PP

  == domain 2  score: 53.5 bits;  conditional E-value: 1.4e-17
        FATC    2 LsveqQVdrLIkeATdpeNLaqmyiGWcPww 32  
                  L+v+ QV++LI++AT+ eNL+ +yiGWc +w
  EPX74347.1 2308 LDVPNQVEKLIQQATSIENLCLCYIGWCSFW 2338
                  99***************************** PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1         7   7.4e+03      19      28 ..     103     112 ..     102     112 .. 0.87
   2 ?    0.8   0.0      0.75   7.9e+02      13      30 ..     139     156 ..     131     157 .. 0.83
   3 !    7.1   0.0     0.007       7.4       1      30 [.     168     197 ..     168     198 .. 0.92
   4 ?   -1.9   0.0       5.4   5.7e+03       5      28 ..     258     281 ..     256     283 .. 0.77
   5 ?    2.3   0.1      0.24   2.5e+02       5      27 ..     484     506 ..     482     508 .. 0.84
   6 ?    4.3   0.0     0.057        60       5      24 ..     532     551 ..     527     553 .. 0.82
   7 ?    5.8   0.0     0.019        20       4      27 ..     567     590 ..     565     593 .. 0.87
   8 !    7.5   0.0    0.0054       5.7       1      30 [.     647     676 ..     647     677 .. 0.91
   9 !   14.8   0.1   2.4e-05     0.025       1      27 [.     688     715 ..     688     717 .. 0.92
  10 ?    1.8   0.0      0.37   3.9e+02      10      30 ..     981    1001 ..     974    1002 .. 0.87
  11 ?   -1.9   0.0       5.8   6.1e+03       1      28 [.    1011    1038 ..    1011    1041 .. 0.84
  12 ?    2.1   0.0       0.3   3.1e+02       1      26 [.    1740    1765 ..    1740    1769 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 7
                 HHHHHHHHHH CS
        HEAT  19 aAakaLgala 28 
                  AakaLg+la
  EPX74347.1 103 LAAKALGRLA 112
                 59******97 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.75
                 SHHHHHHHHHHHHHHHHC CS
        HEAT  13 speVReaAakaLgalaev 30 
                 + + R+aA++ L +la++
  EPX74347.1 139 NENRRYAAVLILKELAKN 156
                 5668***********986 PP

  == domain 3  score: 7.1 bits;  conditional E-value: 0.007
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalaev 30 
                 ++ +l++ l+Dp   +R a+  aL +l+e+
  EPX74347.1 168 IFEFLWHGLRDPKVLIRTASSDALSELLEI 197
                 57899**********************986 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 5.4
                 HHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAakaLgala 28 
                 +l+   + ++ +R+++ + +++++
  EPX74347.1 258 ILQFKDHRDSLIRKTVTELIATIS 281
                 566445678889*******99997 PP

  == domain 5  score: 2.3 bits;  conditional E-value: 0.24
                 HHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAakaLgal 27 
                 +++ l+ +++++R+aAa ++++l
  EPX74347.1 484 VVTYLENDDASIRKAAAVTCCEL 506
                 567788999********998876 PP

  == domain 6  score: 4.3 bits;  conditional E-value: 0.057
                 HHHHHT-SSHHHHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAakaL 24 
                 l   ++D++p++R +++++L
  EPX74347.1 532 LTVGICDTNPDIRLTVLLSL 551
                 45568***********9988 PP

  == domain 7  score: 5.8 bits;  conditional E-value: 0.019
                 HHHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAakaLgal 27 
                 ll  +++D+  ++Rea++k Lg+l
  EPX74347.1 567 LLFIAINDEVFSIREASLKILGRL 590
                 566779****************98 PP

  == domain 8  score: 7.5 bits;  conditional E-value: 0.0054
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalaev 30 
                 +l +l+   +D+sp+V ++ ++++g+++++
  EPX74347.1 647 ILQILVPKAKDSSPSVAANIVNSFGEICQI 676
                 678888889*******************96 PP

  == domain 9  score: 14.8 bits;  conditional E-value: 2.4e-05
                 HHHHHHHHHT-SSHHH.HHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeV.ReaAakaLgal 27 
                 l+Pl++ +l+D+s+ V R+a++++Lg+l
  EPX74347.1 688 LMPLIIDALQDQSSPVkRAASLRTLGNL 715
                 8**********888888*********98 PP

  == domain 10  score: 1.8 bits;  conditional E-value: 0.37
                  T-SSHHHHHHHHHHHHHHHHC CS
        HEAT   10 sDpspeVReaAakaLgalaev 30  
                  +D s +VRe++  ++g+l+ v
  EPX74347.1  981 QDVSLDVRENVMITIGRLSTV 1001
                  78899************9875 PP

  == domain 11  score: -1.9 bits;  conditional E-value: 5.8
                  HHHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT    1 llPlllkllsDpspeVReaAakaLgala 28  
                  ++ ++++ ls+ +p+  + ++++L+al+
  EPX74347.1 1011 IIHPIMRTLSSGAPSLVRVSLNTLCALI 1038
                  5677899999*****9999999999997 PP

  == domain 12  score: 2.1 bits;  conditional E-value: 0.3
                  HHHHHHHHHT-SSHHHHHHHHHHHHH CS
        HEAT    1 llPlllkllsDpspeVReaAakaLga 26  
                  ++P l+  ++ ps +VR+++ + L +
  EPX74347.1 1740 VIPQLIARIHAPSLNVRKSVHQLLSD 1765
                  68****************99887765 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.1      0.04        42       4      58 ..     130     194 ..      95     211 .. 0.77
   2 ?   -1.3   0.0       2.7   2.9e+03      35      67 ..     296     332 ..     257     340 .. 0.58
   3 ?    2.9   0.0      0.13   1.4e+02      16      53 ..     458     501 ..     453     529 .. 0.80
   4 !    9.5   0.0    0.0012       1.3       9      72 ..     536     607 ..     524     610 .. 0.76
   5 !   15.0   0.0   2.3e-05     0.025       4      85 ..     651     754 ..     645     757 .. 0.73
   6 ?   -1.1   0.1       2.5   2.6e+03      38      55 ..    1140    1158 ..    1112    1195 .. 0.62
   7 ?    5.0   1.1     0.031        32       1      57 [.    1741    1798 ..    1739    1825 .. 0.65

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.04
      HEAT_2   4 LlqalendpdpevrraairaLgri.gnp.........ealpaLvellededpavRraaaeaLgai 58 
                  l+ l+   +++ r+aa+  L ++ +n+         ++++ L   l+d++  +R a  +aL+++
  EPX74347.1 130 ALEWLQGERNENRRYAAVLILKELaKNTstliyahidSIFEFLWHGLRDPKVLIRTASSDALSEL 194
                 57888888999999999999996513445555555546688888888999999999999999976 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 2.7
      HEAT_2  35 aLvelled.edpavRraaaeaLgaig...dpealpaL 67 
                 +++ ll+  ++++ R+ a  +Lg+i+   +++ +p L
  EPX74347.1 296 CMLHLLNLlKKERARMLAFSTLGKIAvaiTNSIVPYL 332
                 4555553227889999999999999744445556655 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.13
      HEAT_2  16 vrraairaLg......rignpealpaLvellededpavRraaae 53 
                 v   a+++Lg       i n+ + +++v +le++d+ +R+aaa 
  EPX74347.1 458 VYVLALQTLGdfnfsgYILNEFVKDYVVTYLENDDASIRKAAAV 501
                 556788888866665556677779999**************996 PP

  == domain 4  score: 9.5 bits;  conditional E-value: 0.0012
      HEAT_2   9 endpdpevrraairaLg.rignp....ealpaLvellededpavRraaaeaLgaigd..pe.alpaLkelld 72 
                   d +p++r +++ +L  r++      + +++L+ +++de   +R+a  + Lg++    p+ + p L++l++
  EPX74347.1 536 ICDTNPDIRLTVLLSLDsRFDRHlaqvDKIRLLFIAINDEVFSIREASLKILGRLNAynPAyVMPYLRKLML 607
                 349**************745443333355************************9974335548899999986 PP

  == domain 5  score: 15.0 bits;  conditional E-value: 2.3e-05
      HEAT_2   4 LlqalendpdpevrraairaLg...ri.gnp......ealpaLvelleded.pavRraaaeaLgai....g........dpealpaLkellddddddvv 79 
                 L+  + +d++p v+++++ + g   +i g++      +++p+++++l+d++ p  R+a  ++Lg +    g         p+ l++L  + ++++d  +
  EPX74347.1 651 LVPKA-KDSSPSVAANIVNSFGeicQIsGDTiltfkkDLMPLIIDALQDQSsPVKRAASLRTLGNLsvstGyvidpyleYPSLLDILVGIIKTEQDISI 748
                 45555.7***************66643233377777799********99772666666678***8855551444444335999********99999888 PP

      HEAT_2  80 ReaAae 85 
                 R+++++
  EPX74347.1 749 RRETIK 754
                 888776 PP

  == domain 6  score: -1.1 bits;  conditional E-value: 2.5
      HEAT_2   38 ell.ededpavRraaaeaL 55  
                   ll e+++ a R+ aa a+
  EPX74347.1 1140 ALLrESPSHALRACAALAA 1158
                  2222233333333333332 PP

  == domain 7  score: 5.0 bits;  conditional E-value: 0.031
      HEAT_2    1 ldaLlqalendpdpevrraairaLg..rignpealpaLvellededpavRraaaeaLga 57  
                  +++L++++ + p+ +vr+ + + L     ++p+al + + ++  + + +R++aa a+  
  EPX74347.1 1741 IPQLIARI-HAPSLNVRKSVHQLLSdvGRAHPQALVYPLTVAAKSQSSTRQNAALAIMD 1798
                  57899999.89999999999999994433445554444444456677899999988764 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0       1.8   1.9e+03       7      21 ..     104     118 ..     102     127 .. 0.78
   2 ?    5.8   0.0     0.019        20       4      55 .]     143     194 ..     140     194 .. 0.94
   3 ?    0.8   0.0      0.72   7.6e+02      26      55 .]     293     320 ..     278     320 .. 0.86
   4 ?   -0.2   0.0       1.4   1.5e+03      37      51 ..     488     502 ..     482     503 .. 0.78
   5 ?   -1.5   0.1       3.6   3.8e+03      18      49 ..     516     548 ..     514     551 .. 0.80
   6 ?    0.5   0.0      0.85     9e+02       3      31 ..     579     607 ..     578     617 .. 0.84
   7 ?    5.0   0.0     0.035        37      14      55 .]     632     673 ..     619     673 .. 0.83
   8 !   17.9   0.0   3.2e-06    0.0033       6      55 .]     665     715 ..     660     715 .. 0.93
   9 ?   -0.7   0.0       2.1   2.2e+03      19      44 ..     797     822 ..     790     828 .. 0.76
  10 ?    2.0   0.0       0.3   3.1e+02      22      43 ..     842     863 ..     838     866 .. 0.85
  11 ?   -2.5   0.0       7.8   8.3e+03      44      55 .]     987     998 ..     984    1029 .. 0.56
  12 ?    1.4   0.0      0.44   4.7e+02      18      42 ..    1196    1220 ..    1188    1233 .. 0.85
  13 ?   -1.1   0.1       2.9     3e+03       3      50 ..    1788    1825 ..    1786    1826 .. 0.59

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 1.8
     HEAT_EZ   7 AawaLGrlaggepel 21 
                 Aa aLGrla+ ++ l
  EPX74347.1 104 AAKALGRLAVPGGAL 118
                 899****99887766 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.019
     HEAT_EZ   4 RraAawaLGrlaggepellqplvpeilpaLlalLnddsdeVRaaAagaLgnl 55 
                 R aA++ L +la + + l+  +++ i  +L  +L+d++ ++R+a+  aL+ l
  EPX74347.1 143 RYAAVLILKELAKNTSTLIYAHIDSIFEFLWHGLRDPKVLIRTASSDALSEL 194
                 779*****99************************9999999********986 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.72
     HEAT_EZ  26 vpeilpaLlalLnddsdeVRaaAagaLgnl 55 
                 + + +  Ll+lL  ++ + R  A  +Lg++
  EPX74347.1 293 LHVCMLHLLNLL--KKERARMLAFSTLGKI 320
                 4478999*****..**************97 PP

  == domain 4  score: -0.2 bits;  conditional E-value: 1.4
     HEAT_EZ  37 LnddsdeVRaaAaga 51 
                 L++d++++R+aAa +
  EPX74347.1 488 LENDDASIRKAAAVT 502
                 667888**9999965 PP

  == domain 5  score: -1.5 bits;  conditional E-value: 3.6
     HEAT_EZ  18 epellqplvpeilpaLl.alLnddsdeVRaaAa 49 
                  +++  ++v e+l  Ll  + +d ++++R +++
  EPX74347.1 516 TSDHAIQVVAEVLEKLLtVGICDTNPDIRLTVL 548
                 567778889999999997888999999998876 PP

  == domain 6  score: 0.5 bits;  conditional E-value: 0.85
     HEAT_EZ   3 vRraAawaLGrlaggepellqplvpeilp 31 
                 +R+a +  LGrl + +p ++ p++ +++ 
  EPX74347.1 579 IREASLKILGRLNAYNPAYVMPYLRKLML 607
                 799********777799999999999986 PP

  == domain 7  score: 5.0 bits;  conditional E-value: 0.035
     HEAT_EZ  14 laggepellqplvpeilpaLlalLnddsdeVRaaAagaLgnl 55 
                 l + +p l++ +v  il  L++  +d+s++V a+ +  +g +
  EPX74347.1 632 LISAAPKLIESHVGPILQILVPKAKDSSPSVAANIVNSFGEI 673
                 446789999************************999999876 PP

  == domain 8  score: 17.9 bits;  conditional E-value: 3.2e-06
     HEAT_EZ   6 aAawaLGrlaggepellqplvpeilpaLlalLnddsdeV.RaaAagaLgnl 55 
                 + ++ +G++++  ++++ ++ ++++p+ + +L+d s++V Raa++++Lgnl
  EPX74347.1 665 NIVNSFGEICQISGDTILTFKKDLMPLIIDALQDQSSPVkRAASLRTLGNL 715
                 55788999*****************************************97 PP

  == domain 9  score: -0.7 bits;  conditional E-value: 2.1
     HEAT_EZ  19 pellqplvpeilpaLlalLnddsdeV 44 
                 p   + + ++++ aL++ L+d+s ++
  EPX74347.1 797 PSSEEYYPTVVITALMSILKDPSLSI 822
                 55556677899**********99776 PP

  == domain 10  score: 2.0 bits;  conditional E-value: 0.3
     HEAT_EZ  22 lqplvpeilpaLlalLnddsde 43 
                 ++p++++i+p+++a +++++++
  EPX74347.1 842 CAPFLSQIIPEFIAVMRTSPSN 863
                 6799**********99888765 PP

  == domain 11  score: -2.5 bits;  conditional E-value: 7.8
     HEAT_EZ  44 VRaaAagaLgnl 55 
                 VR+++ +++g+l
  EPX74347.1 987 VRENVMITIGRL 998
                 555555555554 PP

  == domain 12  score: 1.4 bits;  conditional E-value: 0.44
     HEAT_EZ   18 epellqplvpeilpaLlalLnddsd 42  
                   +++++p++ +il  L+ ++++d++
  EPX74347.1 1196 TSPHISPEIIQILLNLAEFMEHDDK 1220
                  57899*****************998 PP

  == domain 13  score: -1.1 bits;  conditional E-value: 2.9
     HEAT_EZ    3 vRraAawaLGrlaggepellqplvpeilpaLlalLnddsdeVRaaAag 50  
                   R +Aa+a++      + + + lv+   + L+     ++ ++Raa ++
  EPX74347.1 1788 TRQNAALAIM---DSVRTHSARLVE--QARLV-----SHELIRAAILW 1825
                  5888888887...555555444444..35666.....66666666666 PP

>> Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.0    0.0017       1.8      23      89 ..     121     188 ..     102     196 .. 0.78
   2 ?   -1.0   0.0       2.6   2.8e+03       5      30 ..     312     337 ..     250     346 .. 0.65
   3 ?   -0.8   0.1       2.2   2.3e+03      26      85 ..     477     544 ..     461     553 .. 0.68
   4 ?    5.3   0.0     0.028        29      21      90 ..     640     709 ..     626     713 .. 0.89
   5 ?   -0.7   0.0       2.1   2.2e+03      18      73 ..     839     894 ..     799     906 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.0017
  Vac14_Fab1_bd  23 eyleeivkpvlkcfsD.kdsrvRyyacEslyniakvakgevlkllneifdalvklvaDsdesvksgae 89 
                    e+++  vk  l+ ++  +++  Ry a+  l  +ak + + +  ++ +if+ l++ + D +  ++++++
     EPX74347.1 121 EFVNFEVKRALEWLQGeRNENRRYAAVLILKELAKNTSTLIYAHIDSIFEFLWHGLRDPKVLIRTASS 188
                    55555666666666641455669999999*******************************99999864 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 2.6
  Vac14_Fab1_bd   5 ggligLaavaialekkikeyleeivk 30 
                     +  +L  +a+a++++i +yl+ i +
     EPX74347.1 312 LAFSTLGKIAVAITNSIVPYLDPICA 337
                    23334444555555555555544444 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 2.2
  Vac14_Fab1_bd  26 eeivk.pvlkcfsDkdsrvRyya...cEslyn...iakvakgevlkllneifdalvkl.vaDsdesvk 85 
                    +e+vk  v+++++ +d+ +R  a   c  l+    i  ++ +++++++ e+++ l  + ++D++++++
     EPX74347.1 477 NEFVKdYVVTYLENDDASIRKAAavtCCELFVhdpIHSQTSDHAIQVVAEVLEKLLTVgICDTNPDIR 544
                    55554257788888888888644333334443244777888888888888888777664788888887 PP

  == domain 4  score: 5.3 bits;  conditional E-value: 0.028
  Vac14_Fab1_bd  21 ikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalvklvaDsdesvksgael 90 
                    i++++  i+++++   +D++  v    + s+  i++++ +++l++ +++   ++  + D+ + vk++a+l
     EPX74347.1 640 IESHVGPILQILVPKAKDSSPSVAANIVNSFGEICQISGDTILTFKKDLMPLIIDALQDQSSPVKRAASL 709
                    788889999999******************************************************9975 PP

  == domain 5  score: -0.7 bits;  conditional E-value: 2.1
  Vac14_Fab1_bd  18 ekkikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdal 73 
                    + + +++l++i++  +++++ + s +  +    l  ++ ++++++ ++l e+f+ +
     EPX74347.1 839 GLRCAPFLSQIIPEFIAVMRTSPSNILEFYFQQLSILVLIVRQHIRTFLPELFKLI 894
                    34466777777777777777777777666666777777777777777777777665 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0      0.25   2.7e+02      19      92 ..     165     202 ..     134     297 .. 0.53
   2 ?   -0.5   0.0       1.1   1.1e+03       3      32 ..     310     341 ..     309     345 .. 0.92
   3 !    8.6   0.2    0.0017       1.7       5      88 ..     461     557 ..     458     599 .. 0.67
   4 !    7.6   0.0    0.0035       3.7      66     110 ..     654     698 ..     609     717 .. 0.80
   5 ?   -0.7   0.2       1.2   1.3e+03       2      50 ..     987    1039 ..     986    1057 .. 0.76

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.25
        Cnd1  19 veylvepLrkrLkDedpyVRktaaivvakLilndmvkekgflselaklleDenprVvanalaalteisek.sena 92 
                 ++                                      +++ l + l+D++  +++ +  al+e++e   ++ 
  EPX74347.1 165 IDS-------------------------------------IFEFLWHGLRDPKVLIRTASSDALSELLEIvRQRD 202
                 222.....................................44444455566666666666666666666653333 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 1.1
        Cnd1   3 Ralairtlg..cirvpnlveylvepLrkrLkD 32 
                 R la  tlg  ++ ++n + ++++p+++++k 
  EPX74347.1 310 RMLAFSTLGkiAVAITNSIVPYLDPICAAIKE 341
                 8899***********************99885 PP

  == domain 3  score: 8.6 bits;  conditional E-value: 0.0017
        Cnd1   5 lairtlgcirvpn..lveylvepLrkrLkDedpyVRktaaivvakLilndmvk..........ekgflselakl.leDenprVvanalaalteisek 88 
                 la+ tlg ++++   l e + + + + L+ +d+ +Rk aa+++++L+ +d +           + ++l++l++  ++D+np ++  +l++l    ++
  EPX74347.1 461 LALQTLGDFNFSGyiLNEFVKDYVVTYLENDDASIRKAAAVTCCELFVHDPIHsqtsdhaiqvVAEVLEKLLTVgICDTNPDIRLTVLLSLDSRFDR 557
                 6777777555554114466777888999******************665554411111111113345555544325899998888888888766555 PP

  == domain 4  score: 7.6 bits;  conditional E-value: 0.0035
        Cnd1  66 lleDenprVvanalaalteiseksenaiynllpdiisklsdalne 110
                   +D++p+V an ++++ ei + s+++i++ ++d++  + dal++
  EPX74347.1 654 KAKDSSPSVAANIVNSFGEICQISGDTILTFKKDLMPLIIDALQD 698
                 459********************99****9999988877776655 PP

  == domain 5  score: -0.7 bits;  conditional E-value: 1.2
        Cnd1    2 iRalairtlg....cirvpnlveylvepLrkrLkDedpyVRktaaivvakLil 50  
                  +R ++++t+g    +i++++    ++ p+ ++L+   p   +  + +++ Li 
  EPX74347.1  987 VRENVMITIGrlstVINISDYASRIIHPIMRTLSSGAPSLVRVSLNTLCALIY 1039
                  8*********9888888888888899999999998888777777777777755 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       3.8   4.1e+03      38      57 ..     126     146 ..     122     153 .. 0.73
   2 ?    4.4   0.2     0.041        43       5      81 ..    1245    1315 ..    1242    1316 .. 0.70
   3 ?    2.5   0.0      0.16   1.7e+02      18      56 ..    1386    1425 ..    1379    1440 .. 0.80
   4 ?    6.5   0.0    0.0091       9.6       5      41 ..    1583    1622 ..    1579    1626 .. 0.65

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 3.8
                 -HHHHHHHHHCT.SHHHC-HH CS
      ANAPC3  38 qykrAyellrka.klnskslg 57 
                 + krA+e+l+   ++n +  +
  EPX74347.1 126 EVKRALEWLQGErNENRRYAA 146
                 689*******99666655544 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.041
                  HHHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCTSHHHC-HHHHHHHHHHHHHTT-HHHHHHHH-S CS
      ANAPC3    5 yknAiflaerllaaetespedayllAlclylngqykrAyellrkaklnskslgcrylfAqcllkLkkyeeAiaaLek 81  
                  yk+ +f+ e l+   + s + + +l     +++q + A+ +l+ a++n+k      l+   + kL+++e+A+aa+ek
  EPX74347.1 1245 YKELEFIEEELV--TKPSIDTIEALISINNQLQQPDAAIGILKHAQQNDKM----NLKETWYEKLQRWEDALAAYEK 1315
                  666666666666..3335555556666666788999999999999443333....46666667***********987 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.16
                  HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-H CS
      ANAPC3   18 aetespedayllAlclylngqykrAyellrka.klnsksl 56  
                  +++esp+ a++ A + +++ q+++A   + +a +l ++ l
  EPX74347.1 1386 MKSESPDKAFFSAIVALHRLQFEEASAHITRArDLLDTEL 1425
                  6899**********************99999955544443 PP

  == domain 4  score: 6.5 bits;  conditional E-value: 0.0091
                  HHHHHHHHHHHH.HHH--HHHHHHH....HHHHHHTT-HHH CS
      ANAPC3    5 yknAiflaerllaaetespedayll....Alclylngqykr 41  
                  ++ A+f  + +   +++s e ++++    A c+ ++gq+++
  EPX74347.1 1583 IDPALFAQSAIT-GSQKSQEEIHYYfhllARCYHKQGQWQQ 1622
                  666777666666.4455555544433344999999999975 PP

>> BAF250_C  SWI/SNF-like complex subunit BAF250/Osa
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1      0.77   8.1e+02     124     162 ..     509     547 ..     501     599 .. 0.53
   2 ?   11.0   0.0   0.00018      0.19      75     112 ..     982    1019 ..     976    1025 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.77
    BAF250_C 124 tDplpslgsksvlspqrlaLEaLckLsvldsNvdlllat 162
                  Dp+ s +s+  +     +LE L  + + d+N d+ l+ 
  EPX74347.1 509 HDPIHSQTSDHAIQVVAEVLEKLLTVGICDTNPDIRLTV 547
                 577777777777777777888888888888887754432 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00018
    BAF250_C   75 dvlealrenalvllaniagqLdlskysesivlpildGL 112 
                  dv  ++ren+++++  ++  +++s+y + i  pi+  L
  EPX74347.1  982 DVSLDVRENVMITIGRLSTVINISDYASRIIHPIMRTL 1019
                  666789****************************9766 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.1       1.6   1.7e+03       5      53 ..    1275    1289 ..    1272    1295 .. 0.60
   2 ?    1.3   0.0      0.46   4.9e+02       5      42 ..    1304    1341 ..    1302    1342 .. 0.84
   3 ?    2.0   0.0      0.28   2.9e+02      23      55 ..    1500    1533 ..    1492    1536 .. 0.87
   4 ?    5.0   0.0     0.034        36      24      43 ..    1600    1622 ..    1586    1622 .. 0.72

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 1.6
      TPR_19    5 gdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpe 53  
                  +++++A+ +l+ a                                  ++
  EPX74347.1 1275 QQPDAAIGILKHA----------------------------------QQ 1289
                  5667777777766..................................33 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.46
      TPR_19    5 gdyaeAlalleqalqedpk.naearllLAeallalgqld 42  
                  ++ ++Ala++e+  +++   n e+ ++  ++l alg++d
  EPX74347.1 1304 QRWEDALAAYEK-REASGTgNFEITMGKLRCLHALGEWD 1341
                  567899999999.5555556*****************98 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.28
      TPR_19   23 k.naearllLAeallalgqldeAealLdalpeed 55  
                  k n e ++ + +++ ++g++  A++ Ld l+e++
  EPX74347.1 1500 KeNMEMWIKYSNLCRKSGRIGLAKKSLDLLLEDE 1533
                  4478899999******************999876 PP

  == domain 4  score: 5.0 bits;  conditional E-value: 0.034
      TPR_19   24 naearl...lLAeallalgqlde 43  
                  ++e+ +   lLA+++ ++gq+++
  EPX74347.1 1600 QEEIHYyfhLLARCYHKQGQWQQ 1622
                  56666655579*********986 PP

>> CLASP_N  CLASP N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.0     0.001       1.1      73     126 ..     146     199 ..     143     211 .. 0.90
   2 ?    0.3   0.2      0.39   4.2e+02      51     129 ..     251     326 ..     245     341 .. 0.80
   3 ?    1.7   0.0      0.15   1.5e+02     160     194 ..     509     545 ..     483     551 .. 0.72
   4 ?   -2.3   0.0       2.6   2.7e+03     100     196 ..     610     707 ..     581     709 .. 0.58
   5 ?   -2.9   0.1         4   4.2e+03      20      52 ..    1438    1469 ..    1428    1474 .. 0.71

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.001
     CLASP_N  73 gchllkelaiqlkeqldpmveillptLlkllgdtKkiisqnanqalaallsnas 126
                 ++++lkela+   + + + ++++++ L   l d K +i+++++ al+ ll+ + 
  EPX74347.1 146 AVLILKELAKNTSTLIYAHIDSIFEFLWHGLRDPKVLIRTASSDALSELLEIVR 199
                 6789*********************************************99887 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.39
     CLASP_N  51 lkqlleailkalssLrttlsstgchllkelaiqlkeq.ldpmveillptLlkllgdtKkiisqnanqalaallsnasfsp 129
                  +++++ il+   +  + + +t  +l+  ++  + e+ + ++++  + +Ll+ll  +K+++++ a+ +l  +  +++  +
  EPX74347.1 251 YREVSNTILQFKDHRDSLIRKTVTELIATISTYNPEEfVSNYLHVCMLHLLNLL--KKERARMLAFSTLGKIAVAIT--N 326
                 566666666666666666778889999999999999988889**********99..599999999999999988777..4 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.15
     CLASP_N 160 rfeshkskleaslll..dliekslkkgleDanptVRe 194
                 + ++h+++ ++   +  + +ek+l+ g+ D np +R 
  EPX74347.1 509 HDPIHSQTSDHAIQVvaEVLEKLLTVGICDTNPDIRL 545
                 4444444444444333399****************95 PP

  == domain 4  score: -2.3 bits;  conditional E-value: 2.6
     CLASP_N 100 lkllgdtKkiisqnanqalaallsnasfspri.lqvlsvalqdKnvqpReysaiwLkilltrfeshkskleaslll...dliekslkkgleDanptVRe 194
                 l++l   K i  ++ n+ l +ll +a   p++  +++  +lq   ++++  s    ++++++f+ +  +++  ++l   + ++++++ +l+D ++ V++
  EPX74347.1 610 LTVLDYSKVIRTKEENARLICLLISAA--PKLiESHVGPILQILVPKAKDSSPSVAANIVNSFG-EICQISGDTILtfkKDLMPLIIDALQDQSSPVKR 705
                 444444554444444444444444444..45546666666666666666666666667777776.3333333333334567788888888888888877 PP

     CLASP_N 195 ta 196
                 +a
  EPX74347.1 706 AA 707
                 65 PP

  == domain 5  score: -2.9 bits;  conditional E-value: 4
     CLASP_N   20 nwdaReknilklrslikgnvpedaveelleclk 52  
                  ++  R++ + +l ++i+ + + ++ +++ e++k
  EPX74347.1 1438 SVAVRVQMLSELEEIISYK-KAENKPHVREVIK 1469
                  6777888888888888887.6666677777776 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.1     0.013        14       8      24 ..    1299    1315 ..    1294    1323 .. 0.88
   2 ?    4.5   0.2     0.039        41       3      17 ..    1608    1622 ..    1606    1622 .. 0.91

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.013
       TPR_7    8 lysrlGdyeeAielyeq 24  
                  +y++l+++e+A+  ye+
  EPX74347.1 1299 WYEKLQRWEDALAAYEK 1315
                  599*************9 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.039
       TPR_7    3 lnLarlysrlGdyee 17  
                  + Lar+y+++G++++
  EPX74347.1 1608 HLLARCYHKQGQWQQ 1622
                  78***********97 PP

>> IFRD  Interferon-related developmental regulator (IFRD)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1      0.57     6e+02      67     163 ..      30     121 ..       6     205 .. 0.49
   2 ?    4.8   0.4     0.012        13      59     153 ..     273     367 ..     254     382 .. 0.83
   3 ?   -3.2   0.0       3.2   3.4e+03     226     245 ..     483     502 ..     472     531 .. 0.78
   4 ?    4.4   0.0     0.016        17      74     148 ..     680     754 ..     627     774 .. 0.61
   5 ?   -4.2   0.0       6.6     7e+03     113     141 ..     794     823 ..     789     830 .. 0.73
   6 ?   -2.8   0.0       2.4   2.6e+03     115     155 ..     960    1001 ..     914    1019 .. 0.76

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.57
        IFRD  67 sshyleefveerlatlldalekslkkgkseEqalAlkalallcitlgagdeseeileelkpvLkriikdssvslsakaaaieaLglltfvggadeee 163
                 s+++  e + +  +++ + ++k ++++ s  +++ ++a+  l i    ++e+ + ++++ + L+ i+  ++   +a   a++aLg l++ gga  +e
  EPX74347.1  30 SRELSGEALIQFNNEVNKYVYKLVHSNDSVDRLAGVTAINRL-ID--IEAEDTTRITRFANYLRIILPGND--QTATDLAAKALGRLAVPGGALTSE 121
                 555666666666666666666666666666666666666655.33..234444455555555554444444..555555556666555555554333 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.012
        IFRD  59 LesllellsshyleefveerlatlldalekslkkgkseEqalAlkalallcitlgagdeseeileelkpvLkriikdssvslsakaaaieaLgll 153
                  ++l+ ++s+   eefv++ l   +  l++ lkk+++   a+ +    +++it   +   + i+ ++k+ L+  i++++ s +a  ++i+ L+++
  EPX74347.1 273 VTELIATISTYNPEEFVSNYLHVCMLHLLNLLKKERARMLAFSTLGKIAVAITNSIVPYLDPICAAIKESLTVHIRSKNSSDAAIFQCISYLSIA 367
                 56788888889999*******************99765444444444566778777777788***************999999999***999986 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 3.2
        IFRD 226 alvelLdssdvevriAAGea 245
                 ++v+ L+ +d ++r AA  +
  EPX74347.1 483 YVVTYLENDDASIRKAAAVT 502
                 67788888888888888765 PP

  == domain 4  score: 4.4 bits;  conditional E-value: 0.016
        IFRD  74 fveerlatlldalekslkkgkse.EqalAlkalallcitlgagdeseeileelkpvLkriikdssvslsakaaaie 148
                  + + +++l++ ++ +l+  +s   +a+ l+ l+ l ++ g + +    + +l ++L  iik+++ ++s++ + i+
  EPX74347.1 680 TILTFKKDLMPLIIDALQDQSSPvKRAASLRTLGNLSVSTGYVIDPYLEYPSLLDILVGIIKTEQ-DISIRRETIK 754
                 44444445555555555554444444444555555555544444444444455555555555555.5555555544 PP

  == domain 5  score: -4.2 bits;  conditional E-value: 6.6
        IFRD 113 gagdeseeileelk.pvLkriikdssvsls 141
                 g g +see++ +++ + L++i+kd s+s+ 
  EPX74347.1 794 GIGPSSEEYYPTVViTALMSILKDPSLSIH 823
                 788999998877652669999999997765 PP

  == domain 6  score: -2.8 bits;  conditional E-value: 2.4
        IFRD  115 gdeseeileelkpvLkriikdssvslsakaaaieaLg.lltf 155 
                  gd+  ++++ l   L+r+++ ++vsl+++ +++ ++g l t+
  EPX74347.1  960 GDTLGDYFHMLLGSLMRLYERQDVSLDVRENVMITIGrLSTV 1001
                  455667889999999999999999999999999988844444 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.4     0.017        18      11      26 ..    1300    1315 ..    1298    1315 .. 0.94
   2 ?   -0.9   0.0       2.4   2.5e+03       9      30 ..    1399    1420 ..    1395    1423 .. 0.82
   3 ?   -2.1   0.0       5.6   5.9e+03       4      28 ..    1506    1530 ..    1504    1532 .. 0.85
   4 ?    3.2   0.9      0.11   1.2e+02       3      18 ..    1606    1621 ..    1604    1622 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.017
       TPR_2   11 yyklgdyeeAleafek 26  
                  y+kl+++e+Al+a+ek
  EPX74347.1 1300 YEKLQRWEDALAAYEK 1315
                  99************98 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 2.4
       TPR_2    9 layyklgdyeeAleafekAlel 30  
                   +++++ ++eeA ++  +A  l
  EPX74347.1 1399 IVALHRLQFEEASAHITRARDL 1420
                  56677779*********99876 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 5.6
       TPR_2    4 lynlGlayyklgdyeeAleafekAl 28  
                  +    ++++k+g+   A++ ++  l
  EPX74347.1 1506 WIKYSNLCRKSGRIGLAKKSLDLLL 1530
                  7788999**********99987666 PP

  == domain 4  score: 3.2 bits;  conditional E-value: 0.11
       TPR_2    3 alynlGlayyklgdye 18  
                  + + l+++y k+g+++
  EPX74347.1 1606 YFHLLARCYHKQGQWQ 1621
                  7899**********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2338 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       586  (0.0326845); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 1.22u 0.32s 00:00:01.54 Elapsed: 00:00:00.52
# Mc/sec: 13575.93
//
Query:       EPX74348.1  [L=974]
Description: hypothetical protein SOCG_03558 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.7e-71  239.3   6.9    4.7e-71  239.3   6.9    2.5  3  TIMELESS  Timeless protein


Domain annotation for each model (and alignments):
>> TIMELESS  Timeless protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  239.3   6.9   2.6e-75   4.7e-71       2     276 .]      26     281 ..      25     281 .. 0.94
   2 ?   -0.6   0.2     0.035   6.3e+02     178     242 ..     467     529 ..     432     563 .. 0.56
   3 ?   -3.1   0.1      0.21   3.8e+03     217     253 ..     826     871 ..     824     889 .. 0.55

  Alignments for each domain:
  == domain 1  score: 239.3 bits;  conditional E-value: 2.6e-75
    TIMELESS   2 YklgddclecLkdLkrwlrl.DdddnrrdvaralaeakilqndLipiLiqweek.....kkklalaclrLlvaLTwPlelleeeeeteeqtahytqlkk 94 
                 Y+lg+d+l+cLkdLkr+l++ D++ + ++v+ +l++ +++ ndL+piL++w+ +     ++++ala+l+Llv+LTwPle  e+e + +e+++ + +l++
  EPX74348.1  26 YVLGEDALGCLKDLKRYLQIiDEKYKVWQVRFLLSKLRVVANDLCPILACWDRNiedykHWRIALAALELLVPLTWPLET-EQE-TYRENVDVLKNLQQ 122
                 9***************************************************9999887777*****************8.444.79999********* PP

    TIMELESS  95 alleyKaailseekgkvlkalvrlllevlakdreerterdegiieliLtLiRNilaiedpqekeksasskkeddilhskliealeesgvldllltlass 193
                 a+ +yK+ il++++g vlk ++ +ll++l++++e+r+ rd+g+i++ L+L+RN++ i+++              + ++++i al++s++ldll+tl+s+
  EPX74348.1 123 AQNDYKSCILNYKDGSVLKSILAVLLKPLSTSKESRSVRDNGVIRITLLLLRNLARINEE--------------QTKNETILALQKSNMLDLLVTLTSN 207
                 *********************************************************988..............25789******************** PP

    TIMELESS 194 igkefeqeqfnllllEiiylllkgqdpeeLakesekesrstkeasrasdelskllekekakkkasikknastRHsrFggtlsv 276
                 ++   e+e++++ +lEiiy+l++g++p++L+ ++     ++++++ +++el++ll+ke+++ +  + +na+tRH+rFg+++s+
  EPX74348.1 208 LS---EFEHVDIYILEIIYYLIRGIRPSRLF-KVA----DDNPTKHNQQELNELLQKESNQSRYLK-RNANTRHNRFGTMISI 281
                 *9...9999**********************.333....345666789*************99999.689**********986 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.035
    TIMELESS 178 leesgvldllltlassigkefeqeqfnllllEiiylllkgqdpeeLa..........kesekesrstkeasrasd 242
                 ++++++l+++    +s++++  +  +   + E+ + llk+ +  + a          +          ++++a++
  EPX74348.1 467 FYQEEILNIIYHALKSFKTQ-SF-GYLEAITELTMILLKELERYSSAkqfiyvksrrR----------QQKSAKS 529
                 55566666666666666644.44.3444455555555555544333344445433321..........1122222 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 0.21
    TIMELESS 217 gqdpeeLa.........kesekesrstkeasrasdelskllekeka 253
                 g++p++L+           s++es++++e++  ++++++l ++++ 
  EPX74348.1 826 GINPDNLLvrkqrgkarLPSSSESETESEQRPPESDVEDLSDHNEF 871
                 6666666655555555523333444444444555555555444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (974 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1183  (0.0659825); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.71u 0.29s 00:00:01.00 Elapsed: 00:00:00.47
# Mc/sec: 6210.36
//
Query:       EPX74349.1  [L=2391]
Description: ATR checkpoint kinase Rad3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.1e-62  209.1   0.1    1.9e-61  208.1   0.1    1.6  1  PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
    2.9e-34  118.8   4.3    5.1e-34  118.0   4.3    1.3  1  FAT             FAT domain
    1.8e-21   76.0   0.2    2.3e-20   72.4   0.0    3.0  2  UME             UME (NUC010) domain
    7.9e-13   48.0   0.0    1.9e-12   46.8   0.0    1.7  1  FATC            FATC domain
      0.006   17.1   0.0      0.026   15.0   0.0    2.2  1  LepB_GAP_C      LepB GAP domain C-terminal subdomain
     0.0062   17.2   0.2       0.22   12.2   0.0    2.7  2  TPR_16          Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.078   13.8   0.6        6.1    8.0   0.0    3.4  3  TPR_14          Tetratricopeptide repeat
       0.18   12.5   0.3        1.3    9.9   0.0    2.7  3  TPR_6           Tetratricopeptide repeat
       0.19   11.9   2.8        9.5    6.6   0.0    4.0  5  TPR_2           Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  208.1   0.1   9.5e-65   1.9e-61       2     249 ..    2083    2326 ..    2082    2327 .. 0.95

  Alignments for each domain:
  == domain 1  score: 208.1 bits;  conditional E-value: 9.5e-65
                      EEEEEECSSCHHHHHHHHHHHHHHHHHHHHTTTTCCCT-------EEESSSSEEEEE--TTEEEHHHHHHHHHHHCTTSTCHHHHH...HHHH CS
  PI3_PI4_kinase    2 sagiykvgddlrqdelivqvfklmdeelskennpkrrklalktysviplgrkcgiielvassetaaslldeklekkgvpptasves...lrva 91  
                      +++++k +ddlr+d + +++ +++ ++l+k+++ +rr+l+++ty vipl ++cg+ie+v+++ +++ +l +++ +k++p   ++e+   l +a
      EPX74349.1 2083 YPFLCKPKDDLRKDARLMEFNNVICKILRKDQEANRRNLCIRTYVVIPLNEECGFIEWVNHTRPFRDVLLKNYRQKNIP-ISYQEIkvdLDMA 2174
                      789**********************************************************************995554.4555555678999 PP

                      CHCHCCHHHHHCCHHHHHHTSSTTHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHT-TT--TTTEEEETTTSEEEESSTTTCCTCSH CS
  PI3_PI4_kinase   92 ldkkklkkekklkfekrtalkpksgllqeFvkkspsaeewlearkqFvrslaklsvldyilgngDRhldNilvdktsgklihIDfGlilpdew 184 
                      l+ ++  ++    fek++++k++ + +++Fv+++p+++ w ++r++++r la++s+++y+lg+gDRh +Nil d+ +g+ ih+Df  +l d++
      EPX74349.1 2175 LRSPNPGET----FEKKMLPKFPPVFYEWFVESFPEPNSWVNSRRNYCRTLAVMSIVGYVLGLGDRHGENILFDEFTGEAIHVDF-NCLFDKG 2262
                      999997755....9***********************************************************************.5666*** PP

                      CSSSS-.SSSSSS-THHHHHHTSTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCCSSC CS
  PI3_PI4_kinase  185 kllpfpqekvPfrltrelvlaidpskdeglfresceealealrrdqnlltrllkkavkdglilwe 249 
                       +++ p ekvPfrlt+++v+a++p++ eg fr+  e ++++lr++q+ l+++l+ +++d+l++w+
      EPX74349.1 2263 LTFEKP-EKVPFRLTHNMVDAMGPTGYEGGFRKASEITMKLLRSNQDTLMSVLESFLHDPLVEWN 2326
                      ******.********************************************************96 PP

>> FAT  FAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.0   4.3   2.6e-37   5.1e-34       3     346 .]    1525    1849 ..    1524    1849 .. 0.90

  Alignments for each domain:
  == domain 1  score: 118.0 bits;  conditional E-value: 2.6e-37
                  CTTCCCCTSSSGHHCCCCT....TSSSS--CCCHCCC..CHH--CCHCHHCCCHCCCCCCCCCTS---SCCCCCHHHHHCCCCCHHHCHHCCHHCSS CS
         FAT    3 laaeaaWrlgqWdsmeeylsvlkkdspdkaffeaila..lhrnqfdeakeliekarqlldtelsalvgesynraygvlvrvQmlaEleeiiqykqkl 97  
                  l +eaaW+  + +s+++++++ + +++d ++ e + +  l   ++  +++  e         +s +   s + +y+ l ++++l ++ +i++ ++++
  EPX74349.1 1525 LGIEAAWHSLSVNSLQKCIQKSNLQTFDAKLGEIFRNylLKDSDLATLERQLEPLYAEAASIISNIGAHSSYDCYEMLSKLHALYDFSKIAKTDSSP 1621
                  7799**************************88888777556799***************************************************76 PP

                  ----TTTTTTT----TTS-TTTGCCCTTTCCCCTCCCHCCCHCHCCS-STTCCCCCCCCHCHHHHCCSTTHHCCCCCHCTT.....TT.TSSCCCHH CS
         FAT   98 ssseklksllktWrkRlpgcqdnvevwqdiltvRslvlspiedllkgvkaemwlkfanlarksgrlslAekaLkelleedpeewlprappevvyayl 194 
                  s +e+l++    + +Rl  +  + + ++ il+++ +++s  +    +  a + l++a+  rk+g+ + A++a+++++e d+        p+ +++++
  EPX74349.1 1622 SAQENLETF---LHRRLNKVAPYGRYRHHILSTHLVAFSRFKL--HEKLAGIYLEIARFSRKNGQAQRAYNAILKAMELDK--------PQATIEHA 1705
                  666666666...99************************77755..6679********************************........9******* PP

                  HHHHHCCHHHHHSSCCHHHHCCTSSCCC..SS-SS---............HH.HHCCCTCCCCCCCCCCCT.S...-SSCCHHHHCCHHCTCCCHST CS
         FAT  195 KylwssgeqkealqkLreftsellekke..elqsgleaqkeptnleeftkll.arcylkkGewqealqkldwseekieeilqsysaateidpswyka 288 
                  +++w++g+q++a+ +L  ++++ + + e  ++        ++++  +  +   +++yl++ +w+ + ++l       ++ + +ys+++ei  +w+k+
  EPX74349.1 1706 RWWWHQGQQRKAIAELHSSLENNIFDGEsfNI--------KNKKATQTGNPFkGKVYLELTKWLGKAGQLG-----LKDLETHYSKSVEIYSEWEKN 1789
                  *********************88777532222........3334444666666****************86.....********************* PP

                  TCCCCHHHHHCCHHHHHHSSSS..S-TCC.HHHHCCT..CCHHHHTTTSSTTTCHHHHHC CS
         FAT  289 whtwalfnfevvskeeeqkeeee.pedlq.eyvvpavkgflksislssenslqdtlRLLt 346 
                  +++++++   ++++e++ +  e+ ++ l+ e+v++ +++f +s+ ++ ++ ++++++LLt
  EPX74349.1 1790 HYYLGHHRVLMFEEEKKLPVYEQsERFLSgELVTRIINEFGRSLYYGTSHIYESMPKLLT 1849
                  ****************99766663567779*****************************8 PP

>> UME  UME (NUC010) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1      0.88   1.8e+03      49      97 ..     614     663 ..     576     667 .. 0.83
   2 !   72.4   0.0   1.2e-23   2.3e-20       1      97 [.     863     959 ..     863     963 .. 0.95

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.88
         UME  49 salpqimacLqsaleid.elrsaalsvWatllsnlededleplleqtfal 97 
                 ++++ +m  L+++ ++d  l + ++ +W+   +  e e+l+ +l q++++
  EPX74349.1 614 IIRMEVMKSLKDMSSSDiSLMETTIITWENVGRLAEGEELHLVLLQIIST 663
                 55667899999999886599999999999999999999999999999876 PP

  == domain 2  score: 72.4 bits;  conditional E-value: 1.2e-23
         UME   1 fLqqhilgiltrlseklndshgkkslaekkraikaleeliklagssissalpqimacLqsaleidelrsaalsvWatllsnlededleplleqtfal 97 
                 f+++hilgil+++s+ lnd +gk+s+++k+r+i +++e++ l g++i+  lpqi++ Lq+a+++d lrs a+++W  l+s +++ +  ++ +  ++l
  EPX74349.1 863 FFNNHILGILAEFSNILNDLKGKTSVNDKIRTIIGIREMFTLSGNAIKLGLPQILSSLQNAFQDDTLRSYAIDTWFQLVSYINEPEYTSIASLSLVL 959
                 899*******************************************************************************999998888776666 PP

>> FATC  FATC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.8   0.0   9.3e-16   1.9e-12       1      32 []    2360    2391 .]    2360    2391 .] 0.98

  Alignments for each domain:
  == domain 1  score: 46.8 bits;  conditional E-value: 9.3e-16
        FATC    1 pLsveqQVdrLIkeATdpeNLaqmyiGWcPww 32  
                  pLsve+Q+++LI+ A++p+NL  myiGW++++
  EPX74349.1 2360 PLSVEGQIQELIRSAVSPKNLVEMYIGWAAYF 2391
                  8*****************************96 PP

>> LepB_GAP_C  LepB GAP domain C-terminal subdomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   1.3e-05     0.026       5      47 ..     344     386 ..     341     408 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 1.3e-05
                 SB----HHHHTTS-HHHHHHHHHHHTTSSS--HHHHHHHTTTH CS
  LepB_GAP_C   5 fFYpisdkeLkemsGaqLatiCleEleaaepSlLlvrivkddt 47 
                 +F +     ++ +s + L+tiC +E +++++S+Ll+r + +d 
  EPX74349.1 344 CFESFRSFSMHLLSSQTLMTICNDEHSDSHTSVLLFRYLLEDA 386
                 566666667889999**********************987764 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.0   0.00011      0.22       5      51 ..    1457    1500 ..    1454    1501 .. 0.91
   2 ?    1.8   0.2      0.19   3.9e+02       7      54 ..    1673    1718 ..    1671    1728 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00011
      TPR_16    5 raalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrla 51  
                  +++ ++g++d A+  +e+++ ++   P++++A  +l +a l+ g ++
  EPX74349.1 1457 LLHENSGKWDSALSCYEILVQNY---PENHRAKVGLLNAMLQSGHYE 1500
                  567899*****************...**********99999999886 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.19
      TPR_16    7 alragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAa 54  
                  a+ +++  +A++a++a lk+     d ++A  + ++ +++qg   +A+
  EPX74349.1 1673 ARFSRKNGQAQRAYNAILKAME--LDKPQATIEHARWWWHQGQQRKAI 1718
                  56678999**********9984..556666666666666666666666 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.0     0.003       6.1       7      41 ..    1455    1489 ..    1451    1492 .. 0.87
   2 ?   -0.0   0.1       1.1   2.2e+03       3      31 ..    1668    1696 ..    1666    1713 .. 0.78
   3 ?    1.4   0.0      0.38   7.5e+02       6      29 ..    1703    1726 ..    1698    1728 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.003
      TPR_14    7 laeallalGdpdeAiallrralalaPddaeawlll 41  
                   + +++++G++d A+ +++ +++ +P++ +a   l
  EPX74349.1 1455 QLLLHENSGKWDSALSCYEILVQNYPENHRAKVGL 1489
                  566899***********************998765 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 1.1
      TPR_14    3 allalaeallalGdpdeAiallrralala 31  
                   +l++a++ + +G+ ++A ++  +a +l+
  EPX74349.1 1668 IYLEIARFSRKNGQAQRAYNAILKAMELD 1696
                  57899999999999999999887776655 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.38
      TPR_14    6 alaeallalGdpdeAiallrrala 29  
                  + a+  +++G+ ++Aia l+  l+
  EPX74349.1 1703 EHARWWWHQGQQRKAIAELHSSLE 1726
                  558889************998887 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0   0.00063       1.3       9      32 ..    1458    1481 ..    1452    1482 .. 0.86
   2 ?   -3.5   0.1         9   1.8e+04       6      21 ..    1672    1687 ..    1669    1691 .. 0.57
   3 ?   -4.0   0.0         9   1.8e+04       7      21 ..    1705    1719 ..    1704    1722 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00063
                  HHHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6    9 syrklgdtdkAlealerlikeYPd 32  
                  ++++ g++d Al  +e l+++YP+
  EPX74349.1 1458 LHENSGKWDSALSCYEILVQNYPE 1481
                  455658*****************7 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 9
                  HHHHHHHHHHHHHHHH CS
       TPR_6    6 lalsyrklgdtdkAle 21  
                  +a+  rk g++++A  
  EPX74349.1 1672 IARFSRKNGQAQRAYN 1687
                  5655566556666644 PP

  == domain 3  score: -4.0 bits;  conditional E-value: 9
                  HHHHHHHHHHHHHHH CS
       TPR_6    7 alsyrklgdtdkAle 21  
                  a+    +g+ +kA++
  EPX74349.1 1705 ARWWWHQGQQRKAIA 1719
                  66677899*****97 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       2.7   5.3e+03      16      27 ..     215     226 ..     214     228 .. 0.86
   2 ?   -2.8   0.0       4.8   9.6e+03       7      26 ..    1387    1406 ..    1386    1406 .. 0.88
   3 ?    6.6   0.0    0.0048       9.5      10      34 .]    1458    1482 ..    1457    1482 .. 0.92
   4 ?    2.6   0.2      0.09   1.8e+02       3      31 ..    1668    1696 ..    1666    1698 .. 0.88
   5 ?   -2.9   0.0       5.1     1e+04      11      29 ..    1708    1726 ..    1705    1728 .. 0.76

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 2.7
       TPR_2  16 dyeeAleafekA 27 
                 +y+eA  ++ ++
  EPX74349.1 215 NYQEACSFYLES 226
                 9*****999886 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 4.8
       TPR_2    7 lGlayyklgdyeeAleafek 26  
                  lGl+ ++ g +++Al ++e+
  EPX74349.1 1387 LGLVSLNCGFHARALFYWEQ 1406
                  889999999999****9996 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.0048
       TPR_2   10 ayyklgdyeeAleafekAleldPnn 34  
                  +++++g+++ Al ++e  ++ +P+n
  EPX74349.1 1458 LHENSGKWDSALSCYEILVQNYPEN 1482
                  6899***************999987 PP

  == domain 4  score: 2.6 bits;  conditional E-value: 0.09
       TPR_2    3 alynlGlayyklgdyeeAleafekAleld 31  
                  ++ ++++  +k+g+ ++A +a  kA eld
  EPX74349.1 1668 IYLEIARFSRKNGQAQRAYNAILKAMELD 1696
                  5778888899******************9 PP

  == domain 5  score: -2.9 bits;  conditional E-value: 5.1
       TPR_2   11 yyklgdyeeAleafekAle 29  
                  ++++g+  +A++ +  +le
  EPX74349.1 1708 WWHQGQQRKAIAELHSSLE 1726
                  6789999999998877766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2391 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       624  (0.0348039); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 1.12u 0.33s 00:00:01.45 Elapsed: 00:00:00.50
# Mc/sec: 14300.55
//
Query:       EPX74350.1  [L=167]
Description: methionine sulfoxide [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      8e-50  168.0   0.2      1e-49  167.6   0.2    1.1  1  SelR            SelR domain
     0.0033   17.1   1.3       0.96    9.2   0.0    3.0  3  zinc_ribbon_10  Predicted integral membrane zinc-ribbon metal
     0.0097   15.4   0.6       0.94    9.0   0.1    2.6  2  TF_Zn_Ribbon    TFIIB zinc-binding
  ------ inclusion threshold ------
       0.11   12.0   1.9        3.9    7.0   0.1    3.1  3  zf-ribbon_3     zinc-ribbon domain
       0.16   11.6   0.2         11    5.7   0.0    2.4  2  zf-C2H2_12      Zinc-finger C2H2-type
       0.36   11.0   3.0        1.1    9.4   0.3    2.7  3  NOB1_Zn_bind    Nin one binding (NOB1) Zn-ribbon like
       0.54   10.4   3.4       0.86    9.7   0.1    2.5  2  zf-ACC          Acetyl-coA carboxylase zinc finger domain
        2.1    8.6   4.7        7.5    6.8   0.1    2.6  3  Ribosomal_L37e  Ribosomal protein L37e


Domain annotation for each model (and alignments):
>> SelR  SelR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  167.6   0.2   4.5e-53     1e-49       1     120 [.      40     160 ..      40     161 .. 0.98

  Alignments for each domain:
  == domain 1  score: 167.6 bits;  conditional E-value: 4.5e-53
                 HHHCTSHCCHHHHHHHTT-SSTTSSSTSS--.SSCEEEETTTS-EEEECCCCE-STTSSSEESS-STTTTEEEEEEECTTSEEEEEEETTCECEEEEEE CS
        SelR   1 elkkkLtpeqyevlrekgterpftgeyekek.ekGvyecavcgepLfssetkfdsgcGwpsFaeaikeeavkekkdtslgmertevvcakcdahlGhvF 98 
                 e++k+L+peqy+vlr+kgte p +g+y++ + ekGv++ca+c+e L++++tkf+s+cGwp+F++++++ +vk+ +d s+gm+rtevvc++c++hlGhvF
  EPX74350.1  40 EWRKELDPEQYRVLRNKGTELPGSGKYTNYFpEKGVFVCAACKELLYKADTKFESHCGWPAFYDNLPG-KVKRIEDDSYGMRRTEVVCSNCGGHLGHVF 137
                 7**************************998769***********************************.****************************** PP

                 C.TSSSSS.SEEEEE-CCCEEEE CS
        SelR  99 e.dgpkpttgkrycinsvslkfk 120
                 + +g++ +t++r+cinsvsl+f+
  EPX74350.1 138 KgEGYAVPTNERHCINSVSLDFH 160
                 **********************8 PP

>> zinc_ribbon_10  Predicted integral membrane zinc-ribbon metal-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.57   1.3e+03      42      48 ..      11      17 ..       7      18 .. 0.76
   2 !    5.2   0.1     0.008        18      33      53 ..      64      84 ..      62      85 .. 0.77
   3 !    9.2   0.0   0.00043      0.96      16      35 ..     117     136 ..     111     145 .. 0.80

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.57
  zinc_ribbon_10 42 evkyrCp 48
                    +++yrC+
      EPX74350.1 11 TLQYRCF 17
                    679***7 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.008
  zinc_ribbon_10 33 GlapkeeleevkyrCpkCgal 53
                    G +++  +e+  ++C+ C++l
      EPX74350.1 64 GKYTNYFPEKGVFVCAACKEL 84
                    556566678889******987 PP

  == domain 3  score: 9.2 bits;  conditional E-value: 0.00043
  zinc_ribbon_10  16 saknryalICskChshnGla 35 
                       + r  ++Cs+C  h G +
      EPX74350.1 117 YGMRRTEVVCSNCGGHLGHV 136
                     5678999*********9987 PP

>> TF_Zn_Ribbon  TFIIB zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0     0.016        37      15      26 ..      71      83 ..      63      89 .. 0.81
   2 !    9.0   0.1   0.00042      0.94      16      26 ..     120     130 ..     109     133 .. 0.87

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.016
                  TSTTCEEESSS.S CS
  TF_Zn_Ribbon 15 pergelvCtdC.G 26
                  pe g +vC +C +
    EPX74350.1 71 PEKGVFVCAACkE 83
                  67899******55 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00042
                   STTCEEESSSS CS
  TF_Zn_Ribbon  16 ergelvCtdCG 26 
                    r+e+vC++CG
    EPX74350.1 120 RRTEVVCSNCG 130
                   589*******7 PP

>> zf-ribbon_3  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0     0.099   2.2e+02      14      24 ..      73      83 ..      70      85 .. 0.70
   2 ?    0.6   0.0      0.19   4.2e+02       6      11 ..      94      99 ..      94     104 .. 0.78
   3 ?    7.0   0.1    0.0017       3.9      17      23 ..     124     130 ..     120     133 .. 0.60

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.099
  zf-ribbon_3 14 sddnvCpyCGt 24
                 +++ vC+ C +
   EPX74350.1 73 KGVFVCAACKE 83
                 56668999976 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.19
  zf-ribbon_3  6 PnCGap 11
                 ++CG+p
   EPX74350.1 94 SHCGWP 99
                 589998 PP

  == domain 3  score: 7.0 bits;  conditional E-value: 0.0017
  zf-ribbon_3  17 nvCpyCG 23 
                  +vC +CG
   EPX74350.1 124 VVCSNCG 130
                  4555555 PP

>> zf-C2H2_12  Zinc-finger C2H2-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.0    0.0049        11      15      34 ..      68      87 ..      66      95 .. 0.87
   2 ?    3.4   0.1     0.026        58      16      32 ..     117     133 ..     116     137 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0049
  zf-C2H2_12 15 dydpqrrglvCmvCgeslas 34
                +y p++   vC  C+e l++
  EPX74350.1 68 NYFPEKGVFVCAACKELLYK 87
                5889999**********987 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.026
  zf-C2H2_12  16 ydpqrrglvCmvCgesl 32 
                 y+ +r  +vC  Cg+ l
  EPX74350.1 117 YGMRRTEVVCSNCGGHL 133
                 888999********988 PP

>> NOB1_Zn_bind  Nin one binding (NOB1) Zn-ribbon like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0         4   8.9e+03      49      55 ..      20      26 ..      11      34 .. 0.52
   2 ?    9.4   0.3   0.00051       1.1       8      31 ..      75      98 ..      72     102 .. 0.91
   3 ?    1.1   0.0      0.21   4.6e+02      22      32 ..     122     132 ..     116     148 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 4
  NOB1_Zn_bind 49 lhlkknf 55
                  ++++kn+
    EPX74350.1 20 FFFQKNP 26
                  3333443 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00051
  NOB1_Zn_bind  8 vlrChaCfkvtkdmtkkFCpkCGn 31
                  v  C aC ++  + + kF ++CG 
    EPX74350.1 75 VFVCAACKELLYKADTKFESHCGW 98
                  678*******************95 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.21
  NOB1_Zn_bind  22 tkkFCpkCGnk 32 
                   t + C++CG +
    EPX74350.1 122 TEVVCSNCGGH 132
                   56679999975 PP

>> zf-ACC  Acetyl-coA carboxylase zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.1   0.00038      0.86       4      15 ..      78      89 ..      76      90 .. 0.94
   2 ?    0.0   0.6      0.41   9.2e+02      22      26 .]     125     129 ..     122     130 .. 0.90

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00038
      zf-ACC  4 CpsCgemlykke 15
                C +C+e+lyk +
  EPX74350.1 78 CAACKELLYKAD 89
                **********87 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.41
      zf-ACC  22 VCPkC 26 
                 VC +C
  EPX74350.1 125 VCSNC 129
                 89999 PP

>> Ribosomal_L37e  Ribosomal protein L37e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       4.2   9.5e+03      26      43 ..      19      36 ..      15      42 .. 0.67
   2 ?    6.8   0.1    0.0033       7.5      17      41 ..      76     100 ..      56     101 .. 0.87
   3 ?    3.2   0.2     0.043        97       6      28 ..     116     135 ..     113     141 .. 0.72

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 4.2
  Ribosomal_L37e 26 syhvqkktCascGypsak 43
                    ++ +qk+   +  yp  k
      EPX74350.1 19 TFFFQKNPSTNMKYPLDK 36
                    566777777777776655 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0033
  Ribosomal_L37e  17 ilCrrCgkrsyhvqkktCascGyps 41 
                      +C  C +  y+  +k  ++cG+p+
      EPX74350.1  76 FVCAACKELLYKADTKFESHCGWPA 100
                     68*********************96 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.043
  Ribosomal_L37e   6 sfGkrqkkktHilCrrCgkrsyh 28 
                     s G r   +t ++C  Cg +  h
      EPX74350.1 116 SYGMR---RTEVVCSNCGGHLGH 135
                     66666...467999999977555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       712  (0.0397122); expected 358.6 (0.02)
Passed bias filter:                      546  (0.0304535); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.44
# Mc/sec: 1151.19
//
Query:       EPX74351.1  [L=247]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      4e-31  108.3   0.0    4.8e-31  108.1   0.0    1.1  1  NAD_binding_10  NAD(P)H-binding
    2.6e-06   27.1   0.0      3e-06   26.9   0.0    1.1  1  Epimerase       NAD dependent epimerase/dehydratase family
     0.0072   15.5   0.0     0.0086   15.3   0.0    1.2  1  NAD_binding_4   Male sterility protein
  ------ inclusion threshold ------
      0.045   13.3   0.0      0.064   12.8   0.0    1.2  1  NmrA            NmrA-like family
      0.046   12.8   0.0      0.065   12.3   0.0    1.3  1  RmlD_sub_bind   RmlD substrate binding domain
       0.11   11.5   0.0       0.15   11.0   0.0    1.2  1  3Beta_HSD       3-beta hydroxysteroid dehydrogenase/isomerase
       0.13   12.1   0.2        3.1    7.7   0.0    2.3  2  LpxI_N          LpxI N-terminal domain


Domain annotation for each model (and alignments):
>> NAD_binding_10  NAD(P)H-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.1   0.0   1.9e-34   4.8e-31       1     181 [.       8     209 ..       8     212 .. 0.80

  Alignments for each domain:
  == domain 1  score: 108.1 bits;  conditional E-value: 1.9e-34
                     TTTSHHHHHHHHHHHHC-T-EEEEEETTHHHCHHHHCT.TTCEEEE--TT-CCHHHHHHTT-..SEEEES---TCC.........HHHHHHHHHH CS
  NAD_binding_10   1 GAtGkvGrllvkellargghevtalvRnpeklaeleae.eglevvegdvtdvedlaealkga..daVvsalggggk.........deegaknivd 83 
                     G++Gkv  ll+k + ++ gh v  +vR+  + +++e+   +++v++++  ++ ++ae lkg+  d++v+a+g+ggk         d eg +++ d
      EPX74351.1   8 GGHGKVSLLLTKIASEA-GHVVYNVVRDYVQNSDIEKVnGRTKVCSLERASPMQIAELLKGIkpDIIVFAAGSGGKggiertkavDYEGSVKVFD 101
                     9****************.5*********99888888544999*******************9666999999888887988877777777****** PP

                     HHHHCT--EEEEEEETTTTSGCGCHHHHHHHH..........CCHHHHHHHHHHHHHH..HHSSSEEEEEEE-CEE-ST--SEEEEETTSS---- CS
  NAD_binding_10  84 aakeagvkRfvlvsaigvgdevpgefgewnke..........llkaylaakraaeell..rasgldwTivrpggLtdepttkyrvvekgepfkgg 166
                     a++ a ++R+++vsai+ +d  + + + ++ke          +l++y+  k+ a+++l  r++++dwTivrp+gLtde++++    + g+   ++
      EPX74351.1 102 AMRIARIRRLIMVSAIDNRDMNQPAPPHYKKEdielslkiheALGTYYHYKYIADQELvrRSTDIDWTIVRPSGLTDEDSNGNI--SIGKVSINS 194
                     *****************998544443333332233333333389********99998543447***************965543..335677789 PP

                     EEEHHHHHHHHHHHC CS
  NAD_binding_10 167 sisradVAdvlvavl 181
                      isr+ VA++++  +
      EPX74351.1 195 MISRETVARAILLFA 209
                     9*********98665 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   0.0   1.2e-09     3e-06       3     172 ..       6     176 ..       4     209 .. 0.81

  Alignments for each domain:
  == domain 1  score: 26.9 bits;  conditional E-value: 1.2e-09
                 EETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC...EEEE--TT-HHHHHHHHHHHT-SEEEE--S---HHHHHHSHHHHHHHHTHHHHHH CS
   Epimerase   3 VtGatGfiGsalvkallekgyevigldrlssasntarledl...elveldltdrsalerlfkeeqpdavihlAavggvaassedpadfieknlqgtlnl 98 
                 + G++G +   l+k   e+g+ v ++ r+ + +n+  ++     +++ l+   + ++++l+k  +pd+++ +A+ gg +  +e+   +   + +g++++
  EPX74351.1   6 IFGGHGKVSLLLTKIASEAGHVVYNVVRD-YVQNSDIEKVNgrtKVCSLERASPMQIAELLKGIKPDIIVFAAGSGGKGG-IER---TKAVDYEGSVKV 99 
                 789*****9999*************9999.5555554444488899999999999***************9988777766.444...3447899***** PP

                 HHHHHHHTCTEEEEEEEGGGGTSCSSSS...BSTCS.TTS--.--SSHHHHHHHHHHHHHHHHHHHHT-EEEEEEESEE CS
   Epimerase  99 leaarkagvkrllflsSsevYGkdaeqp...keett.ltgpl.kpnspYaaaKlageklveayaaqyglnaiilrlfnl 172
                 ++a+r a ++rl+ +s       +++ p   k+e++ l+ ++ +    Y   K+ +++ +   +++ +++ +i+r++ l
  EPX74351.1 100 FDAMRIARIRRLIMVSAIDNRDMNQPAPphyKKEDIeLSLKIhEALGTYYHYKYIADQELV--RRSTDIDWTIVRPSGL 176
                 *****************88888777764598555550444559999999999999999887..6899999*****9866 PP

>> NAD_binding_4  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   3.4e-06    0.0086     159     227 ..     132     197 ..      57     228 .. 0.70

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 3.4e-06
                    .HHH--EEEETTTCCCHHHHHHHHHHHHHHHHHHHH---EEEEEE-EEE--SSST---TTSHHHHHHHH CS
  NAD_binding_4 159 ekldederaklkglpntYeqsKalaEklvrearrrsglpvvivRpsiitgesktGwingsdlgirgllg 227
                    +++ e++++  ++   tY   K++a++ + + +   ++ ++ivRps +t e ++G i   ++ i+ +++
     EPX74351.1 132 KEDIELSLK-IHEALGTYYHYKYIADQELVRRS--TDIDWTIVRPSGLTDEDSNGNISIGKVSINSMIS 197
                    333344444.44455677778******999999..79******************99998877777665 PP

>> NmrA  NmrA-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   2.5e-05     0.064       2     125 ..       5     135 ..       4     153 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2.5e-05
                 EESSTTSHHHHHHHHHHHHHT-EEEEEES-S.-SHHHHHHHHSTTEEE.ES-TT-HHHHHHHHTT-SEEEE---GG...........S-HHHHHHHHHH CS
        NmrA   2 lviGaTGrqGksvvrallkaghkvralvRdt.kselakslkeaGvelv.kgdlddkeslvealkgvdvvfsvtgfy...........skeiedgkklvd 87 
                 +++G+ G+    +++++ +agh v  +vRd  ++  ++++  +G + v + +  +   ++e+lkg +  ++v+++                e  +k+ d
  EPX74351.1   5 AIFGGHGKVSLLLTKIASEAGHVVYNVVRDYvQNSDIEKV--NGRTKVcSLERASPMQIAELLKGIKPDIIVFAAGsggkggiertkAVDYEGSVKVFD 101
                 79****************************9788888887..566777688999999********99888888866789999998666667778999** PP

                 HHHHHS-SEEEEEE---GG.GT.SSS---TTTHHHHHH CS
        NmrA  88 AakeaGvkhfiySslgddndrsnaeepavphfdsKaei 125
                 A   a ++++i  s  d+ d     +pa ph++ K  i
  EPX74351.1 102 AMRIARIRRLIMVSAIDNRDMN---QPAPPHYK-KEDI 135
                 ***********99999888655...77778874.5555 PP

>> RmlD_sub_bind  RmlD substrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   2.6e-05     0.065       4      60 ..       5      78 ..       1     116 [. 0.88

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 2.6e-05
                   EEESTTSHHHHHHHHHCTTTSEEEEEE-TT.................T--TTSHHHHHHHHHHH--SEEEE--- CS
  RmlD_sub_bind  4 lvtGanGqlGseLakqlaeeglevlaltre.................eldltdaeavaellkeakpdvvvnaAA 60
                    ++G++G++   L+k ++e+g+ v+ + r+                 +l+ + + ++aellk +kpd++v aA 
     EPX74351.1  5 AIFGGHGKVSLLLTKIASEAGHVVYNVVRDyvqnsdiekvngrtkvcSLERASPMQIAELLKGIKPDIIVFAAG 78
                   699************************99999************999999999*****************9985 PP

>> 3Beta_HSD  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   5.8e-05      0.15      28     128 ..      28     128 ..       6     168 .. 0.69

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 5.8e-05
   3Beta_HSD  28 vlDlrespelleelskvnvkk.viegDvtdkdkleealegvdvvihlaslvdvagkltedeimkvnvkGTrnvleacvkagvrvlvYtSsaevvgpnsl 125
                 v+ ++ +    ++++kvn ++ v      +  ++ e l+g++  i + ++  + gk   ++   v ++G  +v +a + a +r+l+ +S+++    n+ 
  EPX74351.1  28 VYNVVRDYVQNSDIEKVNGRTkVCSLERASPMQIAELLKGIKPDIIVFAA-GSGGKGGIERTKAVDYEGSVKVFDAMRIARIRRLIMVSAIDNRDMNQP 125
                 45556666666777888877656667777888999999999865555333.344556677789***************************997666555 PP

   3Beta_HSD 126 gee 128
                 + +
  EPX74351.1 126 APP 128
                 544 PP

>> LpxI_N  LpxI N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.0    0.0012       3.1       3      71 ..       5      75 ..       3      95 .. 0.78
   2 ?    2.7   0.1     0.043   1.1e+02      47      84 ..      89     126 ..      58     135 .. 0.75

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0012
      LpxI_N  3 gliAGsGrlPllvaeaakaagrevvvvalegeadeelekivd..evaevsvgqlgklikaLkregvtevvm 71
                ++  G G+  ll+ + a +ag+ v+ v      + ++ek+    +v +++ +   ++ ++Lk  + + +v+
  EPX74351.1  5 AIFGGHGKVSLLLTKIASEAGHVVYNVVRDYVQNSDIEKVNGrtKVCSLERASPMQIAELLKGIKPDIIVF 75
                7889******************9999999999999999977644555555555667788888776666666 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.043
      LpxI_N  47 aevsvgqlgklikaLkregvtevvmaGkvekpklldlr 84 
                   v  +   k+++a++ +++++++m+ ++   ++ + +
  EPX74351.1  89 KAVDYEGSVKVFDAMRIARIRRLIMVSAIDNRDMNQPA 126
                 456667777999*************9999877777655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       449  (0.0250432); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1783.47
//
Query:       EPX74352.1  [L=953]
Description: cortical anchoring factor for dynein Mcp5/Num1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-28   99.3   0.1    3.6e-28   98.1   0.1    1.7  1  Mcp5_PH       Meiotic cell cortex C-terminal pleckstrin homol
  ------ inclusion threshold ------
        3.3    7.8  23.4        6.2    6.9  11.2    3.0  2  Mod_r         Modifier of rudimentary (Mod(r)) protein
        8.5    6.9   7.9          9    6.8   0.3    4.1  3  FlaC_arch     Flagella accessory protein C (FlaC)
        9.2    6.1  13.7        0.2   11.4   2.8    3.2  2  DivIC         Septum formation initiator


Domain annotation for each model (and alignments):
>> Mcp5_PH  Meiotic cell cortex C-terminal pleckstrin homology
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.1   0.1   8.1e-32   3.6e-28       4     119 ..     806     920 ..     803     923 .. 0.91

  Alignments for each domain:
  == domain 1  score: 98.1 bits;  conditional E-value: 8.1e-32
     Mcp5_PH   4 daiaqtmiGeylyKyvrkrkskgssekrhkryvwihpyertllWsskqPksekakegksksvaiesvlsvedenplpkglkefnksililtpdralklt 102
                 + +a++miG+y++Ky r++ +   +++ h ry wihpy++ l+Ws+ +P ++ ++ ++ ksv+i  + +v+++    +    + +si++lt+++ +k++
  EPX74352.1 806 EDLAHVMIGDYIFKYKRNKFARFFFKTMHLRYAWIHPYQERLYWSEINPFIGINRRAEIKSVKIIGFDIVSESYLDDPDA-VHDQSIIVLTDEKPVKIA 903
                 6689***************555569*********************************************9887665555.5***************** PP

     Mcp5_PH 103 aetrerhevWltaLsyl 119
                 a ++++hevWl+aL+ l
  EPX74352.1 904 ARSKDIHEVWLKALRDL 920
                 **************987 PP

>> Mod_r  Modifier of rudimentary (Mod(r)) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   4.3    0.0044        20      36      92 ..      38      94 ..      30     109 .. 0.77
   2 ?    6.9  11.2    0.0014       6.2       6      87 ..     150     232 ..     145     247 .. 0.87

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0044
       Mod_r 36 eellaeneslaeknlslepeleelrselqekleelkelekefeekeqeldellqkfs 92
                e++  ene    +n  +e+ le+  +++ e + +l+ele+++ + e++l +++++ s
  EPX74352.1 38 EKAAVENEIKQAQNSVKENNLEHDHEKVHEIRTQLQELEDSLVAEEAKLVQIVNSKS 94
                555556666666788889999999999999999999999999999999998885544 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0014
       Mod_r   6 eeLqelledeeklealvktl.pevkqlkeekeellaeneslaeknlslepeleelrselqekleelkelekefeekeqeldel 87 
                 +eLq++l++ + l + +++l +++k+++ ek+++ +  +sl ++ l+l ++l +  s ++  + e ++l  e++ +    ++l
  EPX74352.1 150 NELQKVLKENDELLSQLDSLnDRIKTYTIEKSNMTTDHQSLEQNSLALTEKLAQSESMMKMHIGEKEKLALELNSLRLSFNQL 232
                 79********9999999999899*************************99999999999888888888877777766655554 PP

>> FlaC_arch  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   1.5       0.2   8.9e+02       7      36 ..      56      78 ..      40      89 .. 0.55
   2 ?    6.8   0.3     0.002         9       5      38 ..     141     174 ..     137     176 .. 0.87
   3 ?   -1.5   0.0      0.76   3.4e+03      27      42 ..     445     460 ..     443     462 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.2
   FlaC_arch  7 nklsklsteletvkkeneelsksveelken 36
                n       +le   ++  e++++++el+++
  EPX74352.1 56 N-------NLEHDHEKVHEIRTQLQELEDS 78
                2.......3333344445555555555554 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.002
   FlaC_arch   5 lEnklsklsteletvkkeneelsksveelkenVk 38 
                 l  ++++ + el+ v ken+el ++++ l++++k
  EPX74352.1 141 LHYRFKEKDNELQKVLKENDELLSQLDSLNDRIK 174
                 5566778899**********************98 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 0.76
   FlaC_arch  27 sksveelkenVkdlls 42 
                 sk+v +l+ +Vk l+ 
  EPX74352.1 445 SKDVMKLETTVKPLVP 460
                 68999******99986 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   3.1      0.53   2.4e+03       8      36 ..      28      56 ..      25      86 .. 0.60
   2 ?   11.4   2.8   4.5e-05       0.2       6      53 ..     125     171 ..     123     203 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.53
                XXXXXXXXXXHHHHHHHHHHHHHHHHHHH CS
       DivIC  8 llifgkkgllaykqlkqeiaalqaelakl 36
                +  +g++ l+   ++++ei++ q+ +++ 
  EPX74352.1 28 AGLLGESFLQEKAAVENEIKQAQNSVKEN 56
                55566666666666666666666665543 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 4.5e-05
                 XXXXXXXXXXXXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-XXX CS
       DivIC   6 llllifgkkgllaykqlkqeiaalqaelaklkaeneeLeaevkdLksd 53 
                 ++++  gk+ l+++k l+   +++ +el+k+ +en+eL ++++ L+ d
  EPX74352.1 125 QYAATVGKNLLQQLKTLHYRFKEKDNELQKVLKENDELLSQLDSLN-D 171
                 89999****************************************4.4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (953 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1561  (0.0870656); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.82u 0.33s 00:00:01.14 Elapsed: 00:00:00.50
# Mc/sec: 5716.97
//
Query:       EPX74353.1  [L=812]
Description: DNA damage response protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-71  239.6   6.1      5e-71  238.5   6.1    1.6  1  SMK-1     Component of IIS longevity pathway SMK-1


Domain annotation for each model (and alignments):
>> SMK-1  Component of IIS longevity pathway SMK-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  238.5   6.1   2.8e-75     5e-71       1     190 [.     200     390 ..     200     391 .. 0.99

  Alignments for each domain:
  == domain 1  score: 238.5 bits;  conditional E-value: 2.8e-75
       SMK-1   1 eedYikkLlelfeeaedleslenLhalcsivktilllndeelleells.delilgvvGilEydpefpehkanhRefLkqkakfkevipikdeelkkkih 98 
                 +edY+ +L+elf  +edle++++Lh+lcsi+k  + lnd+ lle+l+s de ++ ++GilEydpefp+ kanhRe+L++++kfk+v+pi+++++++kih
  EPX74353.1 200 NEDYVARLIELFPLCEDLENTDDLHRLCSIIKCFVQLNDAPLLESLVSnDEKLMTIAGILEYDPEFPNIKANHREYLTDTSKFKQVVPIREPRILAKIH 298
                 689*********************************************9************************************************** PP

       SMK-1  99 qtyrlqylkDvvLarvlddstlsvLnsliffnqveIvsllqedeefLkelfkllkdeetekekrrelvlllkelcslaknlqlpareelfkt 190
                 qt++lqyl+Dv+++r++d++ +svLns+iffnq++I+++lq+++ fL elf++++++++++ek++e++++++++c++ak+lq ++ ++lf t
  EPX74353.1 299 QTFKLQYLRDVIISRIVDEPSFSVLNSFIFFNQADIIQYLQTNKCFLLELFSIYTNDSHDDEKKQEGIFFIQQVCNIAKSLQFQSCSALFVT 390
                 *****************************************************************************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (812 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       754  (0.0420548); expected 358.6 (0.02)
Passed bias filter:                      421  (0.0234815); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.31s 00:00:00.96 Elapsed: 00:00:00.48
# Mc/sec: 5088.55
//
Query:       EPX74354.1  [L=458]
Description: squalene monooxygenase Erg1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   6.2e-110  366.6   0.0   8.3e-110  366.2   0.0    1.2  1  SE              Squalene epoxidase
    1.9e-10   40.5   0.0    6.6e-10   38.8   0.0    1.7  1  FAD_binding_3   FAD binding domain
    4.2e-08   33.2   0.0    2.9e-06   27.1   0.2    2.2  2  DAO             FAD dependent oxidoreductase
    3.4e-06   27.2   0.5    7.7e-06   26.1   0.5    1.6  1  NAD_binding_8   NAD(P)-binding Rossmann-like domain
    2.2e-05   23.8   0.6    8.8e-05   21.7   0.6    1.8  1  GIDA            Glucose inhibited division protein A
    0.00012   21.3   0.5      0.001   18.3   1.0    2.0  2  FAD_binding_2   FAD binding domain
    0.00019   20.8   0.2     0.0018   17.5   0.1    2.1  2  Thi4            Thi4 family
    0.00066   19.1   0.0    0.00082   18.8   0.0    1.1  1  FAD_oxidored    FAD dependent oxidoreductase
     0.0016   17.7   0.1     0.0025   17.1   0.1    1.2  1  Pyr_redox_2     Pyridine nucleotide-disulphide oxidoreductase
     0.0027   16.8   0.2     0.0078   15.3   0.3    1.7  2  Lycopene_cycl   Lycopene cyclase protein
     0.0038   15.8   0.0     0.0055   15.3   0.0    1.2  1  GDI             GDP dissociation inhibitor
     0.0038   17.7   0.2     0.0081   16.7   0.2    1.6  1  Pyr_redox       Pyridine nucleotide-disulphide oxidoreductase
      0.008   15.8   0.2      0.013   15.1   0.2    1.3  1  ApbA            Ketopantoate reductase PanE/ApbA
  ------ inclusion threshold ------
      0.011   15.8   0.0      0.016   15.2   0.0    1.2  1  Shikimate_DH    Shikimate / quinate 5-dehydrogenase
      0.015   15.5   0.5       0.11   12.7   0.2    2.2  2  TrkA_N          TrkA-N domain
      0.033   12.9   0.3      0.045   12.4   0.3    1.1  1  HI0933_like     HI0933-like protein
      0.043   13.1   0.0      0.068   12.4   0.0    1.2  1  DNase_II        Deoxyribonuclease II
       0.12   11.2   0.4       0.46    9.3   0.6    1.8  2  Trp_halogenase  Tryptophan halogenase
       0.13   11.6   0.0        1.4    8.2   0.0    2.0  2  GMC_oxred_N     GMC oxidoreductase
       0.14   11.4   0.2        0.2   10.8   0.2    1.2  1  Pyr_redox_3     Pyridine nucleotide-disulphide oxidoreductase
       0.16   11.9   0.0       0.28   11.2   0.0    1.3  1  NAD_Gly3P_dh_N  NAD-dependent glycerol-3-phosphate dehydrogen


Domain annotation for each model (and alignments):
>> SE  Squalene epoxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  366.2   0.0  9.7e-113  8.3e-110       1     265 [.     159     423 ..     159     435 .. 0.97

  Alignments for each domain:
  == domain 1  score: 366.2 bits;  conditional E-value: 9.7e-113
          SE   1 kAkltvvcDGifsklRkelsdnkvevtssfvGlvlknaelpkknkghvilgkpspvllYqisstetRilveikskklPsiangelkeylkeevaPqlPk 99 
                 kA+lt+vcDG+fsk+Rk+++d+ +++t++f+Glvl+n+ +p + +ghvil++ +p+++Y+is te+Ril+++++k+lPs  ++ lk+y+ e+++P +P+
  EPX74354.1 159 KAPLTLVCDGCFSKFRKSFVDHPIQITDHFLGLVLTNPGFPVPGRGHVILSDIAPMVIYPISHTEARILINYPGKNLPS--SDVLKQYVLEKCVPRMPE 255
                 69*****************************************************************************..89**************** PP

          SE 100 elrksfkkaleegklrsmpnkflpasknekkGlillGDalnmRHPltggGmtvalnDivllskllkpl..edlsdeekvleelksfyvkRkeldavvnv 196
                 +lr+s+k+a+++++lrsmpn+flp+s n++kGlil+GD++nmRHPltggGmtv+++D++lls+++ p   +dl+d ++v+++ ++ ++kRk +++v+nv
  EPX74354.1 256 SLRPSLKAAVHNDRLRSMPNQFLPPSINRTKGLILVGDSNNMRHPLTGGGMTVCFHDAYLLSRFIAPNvvPDLYDYDNVISQTNKLHWKRKGYSFVINV 354
                 ******************************************************************9888***************************** PP

          SE 197 LsialyslfaadsdelkalrkgCfdYlkrGgecvsgpvallsgllprPllLikhffavalysvylllke 265
                 Lsialy+lfa+++++++alr+gC++Y+ rGg+c++gpv+ll+gl+++P +L+ hf+av+ ys+y+++  
  EPX74354.1 355 LSIALYKLFAPKNRYMQALRNGCIEYFLRGGSCIEGPVRLLGGLDHSPSHLLFHFYAVCAYSIYQYIFV 423
                 ****************************************************************98643 PP

>> FAD_binding_3  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.8   0.0   7.8e-13   6.6e-10       2     319 ..       6     321 ..       5     324 .. 0.76

  Alignments for each domain:
  == domain 1  score: 38.8 bits;  conditional E-value: 7.8e-13
                    EEEEEE--SHHHHHHHHHHHHTTHHEEEEESSSSSCCSSS--EEEHHHHHHHHHTT-HHHHHH.HSEECCCCEEEEEEECCCCCEEEEEHHCHHCS CS
  FAD_binding_3   2 tdVlIVGaGpaGlmlallLseaGvrvvlvekrsttvvlpradglnqrtmellrqlGledrila.egapnelmgealynelsdtpkaradlelessp 96 
                    +d++IVGaG +G  la  L ++G +v+++e+  ++ +   ++ l++  +e l+++G+ed i+  +g+  ++ +++++ +      + + +  +s +
     EPX74354.1   6 ADIIIVGAGITGCALAAALGRQGRKVLVLERDMSEPDRIVGELLQPGGIEALEKIGIEDCIQGiDGQFTSGYQIFHKDS-----SVAVPYPKKSDG 96 
                    799**********************************************************863566677777777777.....444444434555 PP

                    T-CEE--..HHHHHHHHHHHHHHHT.EEETCSEEEECCEECCCCC..CCEEEECCTTEE.EEEEEEEEEE--GTT-HHHHHHTGGEEEEEEEEEEE CS
  FAD_binding_3  97 ervtvyp..qteleriLvehaeerg.lqvrfktevesleqdeegv..taevrdketgee.etvrakYlvGaDGgrStvrktlgiefegeetvyeag 186
                    +++  ++    ++   L++ + +++ +++ ++t  e l++d++g+  + ++  ++ ++     +a  +  +DG  S+ rk+   + + + t+   +
     EPX74354.1  97 SSYRGIGfhYGRFVMNLRKTLMNTPnVTIVEATVNE-LLRDDSGEiiRGVAATRKPDASlLSYKAPLTLVCDGCFSKFRKSFV-DHPIQITD---H 187
                    555554400556777788999999989998888766.556655541255555666666557889****************975.33444444...7 PP

                    EEEEEEEC.-SCCCTTCCEEEEECCTTEEEEEECCETEEEEEEEEECCE-GGGS.CCCHHHHHHHHHHHHHHTTSSCEE.EEEEEEEEEEEEEEES CS
  FAD_binding_3 187 vldvlfda.dlsdiveplvlilsaesrgvmviPlentlerfyvqvearaekeer.sekfteeevkarlreivgektldv.eieevsawtvaqrvae 279
                    +l+++ +   ++ +    ++ils+  ++  + P + t+ r+++  + ++  +++  +++  e+++ r++e+  ++   +   ++ ++++++    +
     EPX74354.1 188 FLGLVLTNpGFPVPGR-GHVILSDIAPM-VIYPISHTEARILINYPGKNLPSSDvLKQYVLEKCVPRMPESLRPSLKAAvHNDRLRSMPNQFLPPS 281
                    7777777778884444.47888888885.899999988888887776665555559999*************999876636666777766666666 PP

                    SSEETTEEE-GGGTEEE-STTSHHHHHHHHHHHHHHHHHH CS
  FAD_binding_3 280 kyrkgrvflaGDAaHihpPtgGqGlNtaiqDavnLawkLa 319
                      r   + l+GD+  +  P +G G+ +   Da+ L + +a
     EPX74354.1 282 INRTKGLILVGDSNNMRHPLTGGGMTVCFHDAYLLSRFIA 321
                    67777****************************9987665 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.2   3.4e-09   2.9e-06       1      29 [.       7      37 ..       7      42 .. 0.94
   2 ?    3.9   0.0     0.039        33     143     218 ..     104     183 ..      90     288 .. 0.73

  Alignments for each domain:
  == domain 1  score: 27.1 bits;  conditional E-value: 3.4e-09
                EEEEECTSHHHHHHHHHHHHTT..EEEEESS CS
         DAO  1 dvviiGGGiiGlstAyeLarrg..Vtllekg 29
                d++i+G+Gi+G++ A +L r+g  V++le++
  EPX74354.1  7 DIIIVGAGITGCALAAALGRQGrkVLVLERD 37
                8*****************99999*******8 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.039
                 EEHHHHHHHHHHH.HHHTT-EEEESECEEEEEEEE..TCEEEEE.EECT.EEEEEEEE..EEE--GGGHHHHHTTCTT.TSEEE CS
         DAO 143 vdpakltaalara.aealGveilegtevtgleeed..gkvwgve.rttp.gendaada..vVnaaGawsdllgllkel.dlpis 218
                 +++ +++  l+++ + +  v+i+e  +v +l ++d  + + gv  + +p  +  +++a    ++ G++s++    k + d+pi+
  EPX74354.1 104 FHYGRFVMNLRKTlMNTPNVTIVEA-TVNELLRDDsgEIIRGVAaTRKPdASLLSYKAplTLVCDGCFSKFR---KSFvDHPIQ 183
                 5999*********778889*****9.9999855555655556645333323332445566*******99743...222334433 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.5     9e-09   7.7e-06       1      27 [.      10      36 ..      10      39 .. 0.96

  Alignments for each domain:
  == domain 1  score: 26.1 bits;  conditional E-value: 9e-09
                   EE--SHHHHHHHHHHHCCTEEEEEE-S CS
  NAD_binding_8  1 IvGaGlsGlvaAylLakagfdvlllek 27
                   IvGaG++G+++A++L ++g++vl+le+
     EPX74354.1 10 IVGAGITGCALAAALGRQGRKVLVLER 36
                   9*************************8 PP

>> GIDA  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.6     1e-07   8.8e-05       1     133 [.       7     147 ..       7     172 .. 0.76

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 1e-07
                 CEEEE-SSHHHHHHHHHHHHTT--EEEE...ES-GGGT.T--SSSSEEE-TTHHHHHHHHHHHT....-SHHHHHHHHEEEEEEESTTS-CCC-EEEEE CS
        GIDA   1 dviViGgGhAGceAAlaaarlGakvlLi...thkldti.aelsCnpsiggiakgllvrEidalg....gliikaadkagiqfrilNrskGpavralraq 91 
                 d+i++G+G  Gc+ A+a+ r G kvl +     + d+i +el     i ++ k  +   i+ ++    +    + + +++ +    +s G + r++   
  EPX74354.1   7 DIIIVGAGITGCALAAALGRQGRKVLVLerdMSEPDRIvGELLQPGGIEALEKIGIEDCIQGIDgqftSGYQIFHKDSSVAVPYPKKSDGSSYRGI--G 103
                 79**************************9984444443134444444555555555555555550001444556777889999999999*******..8 PP

                 E-HHHHHHHHHHHHHTSTTEEEEES-EEEEEECT..TEEEEEEE CS
        GIDA  92 vdrelyskevteklenepnleiieeeveelivee..kkvkgvvt 133
                     ++  +++++l n+pn++i+e++v+el+ ++  + ++gv  
  EPX74354.1 104 FHYGRFVMNLRKTLMNTPNVTIVEATVNELLRDDsgEIIRGVAA 147
                 88899*************************87667677777765 PP

>> FAD_binding_2  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   1.0   1.2e-06     0.001       1      30 [.       7      36 ..       7      40 .. 0.95
   2 ?   -0.2   0.0      0.48   4.1e+02     161     211 ..     127     178 ..     109     205 .. 0.79

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 1.2e-06
                   SEEEE--SHHHHHHHHHHHHTTT-EEEEES CS
  FAD_binding_2  1 DviViGsGlAGLaAAleaaeaGlkvavvek 30
                   D+i++G+G+ G+a A+++ ++G+kv+v+e 
     EPX74354.1  7 DIIIVGAGITGCALAAALGRQGRKVLVLER 36
                   99**************************97 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.48
                    SEEEEEEEECTT..EEEEEEEEETTTTCEEEEEESEEEE-----GG....... CS
  FAD_binding_2 161 rteadeLivedg..rvtGavvenpesgrevrirakavvlatgGfgrallkell 211
                    ++ ++eL+++d    ++G+ ++ + + +   ++a  +++  g f++ + k++ 
     EPX74354.1 127 EATVNELLRDDSgeIIRGVAATRKPDASLLSYKAPLTLVCDGCFSK-FRKSFV 178
                    67799999987777899**99999999999*****99999999996.444433 PP

>> Thi4  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.1   2.1e-06    0.0018      17      52 ..       5      39 ..       2      66 .. 0.94
   2 ?    0.8   0.0      0.29   2.5e+02      99     136 ..     109     146 ..      86     150 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 2.1e-06
                EEEEEEE--SHHHHHHHHHHHHCTTS-EEEEESSSS CS
        Thi4 17 esDvvivGaGssGLtaayylakkpdlkvailersvs 52
                ++D++ivGaG +G + a  l+++ + kv++ler +s
  EPX74354.1  5 DADIIIVGAGITGCALAAALGRQ-GRKVLVLERDMS 39
                58*********************.*********987 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.29
                 HHHHHHHHHHTSTTEEEEESEEEEEEEEET..BTEEEEEE CS
        Thi4  99 ftstllskvlqlanvkllnavaveDlivre..gegvaGvv 136
                 f+ +l   +++ +nv +++a++ e l+ r+  ge ++Gv 
  EPX74354.1 109 FVMNLRKTLMNTPNVTIVEATVNE-LL-RDdsGEIIRGVA 146
                 66777788999********99766.43.442358999986 PP

>> FAD_oxidored  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   9.6e-07   0.00082       1     127 [.       7     149 ..       7     167 .. 0.60

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 9.6e-07
  FAD_oxidored   1 DvvVvGGgpaGvaAAiaAaraGakvlLve.....ergvlGGlltsglvatdignkaeeqvvtgiareflerlrq.rgga....rlkkrskwn..... 82 
                   D+++vG+g+ G+a A a  r+G+kvl++e     +++ +G ll  g+  ++++  +e+  ++gi ++f++  +  ++++    ++ k+s+ +     
    EPX74354.1   7 DIIIVGAGITGCALAAALGRQGRKVLVLErdmsePDRIVGELLQPGGIEALEKIGIED-CIQGIDGQFTSGYQIfHKDSsvavPYPKKSDGSsyrgi 102
                   9***************************944443456667666666666666666555.66666666666664453333244433333332123456 PP

  FAD_oxidored  83 .tfepevakavleemlaeagvtvllntrlvevekeg.kr.iesvtves 127
                    ++  +++ ++ + +++ ++vt++  t + e  +++ ++ i++v + +
    EPX74354.1 103 gFHYGRFVMNLRKTLMNTPNVTIVEAT-VNELLRDDsGEiIRGVAATR 149
                   555556666666666677777765443.44444432122466666654 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.1   2.9e-06    0.0025     144     173 ..       7      36 ..       3      88 .. 0.71

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 2.9e-06
                  EEEEES-SHHHHHHHHHHHHHT-EEEEEES CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 144 rivvvGgGyiGvElAaalaklgkevtlvea 173
                  +i++vG+G +G+ lAaal + g +v ++e+
   EPX74354.1   7 DIIIVGAGITGCALAAALGRQGRKVLVLER 36 
                  566666666666666666666666666555 PP

>> Lycopene_cycl  Lycopene cyclase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.3   9.1e-06    0.0078       1      32 [.       7      36 ..       7      45 .. 0.90
   2 ?   -3.2   0.0       3.9   3.3e+03      89     128 ..     109     149 ..      93     181 .. 0.72

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 9.1e-06
  Lycopene_cycl  1 DvvviGaGpAglslAarlteakpglkvvliea 32
                   D++++GaG  g++lAa l   ++g kv+++e 
     EPX74354.1  7 DIIIVGAGITGCALAAAL--GRQGRKVLVLER 36
                   9*****************..999999999974 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 3.9
  Lycopene_cycl  89 lkeellerlv.engvklleakvesveeeeageslvvleggr 128
                    +  +l + l+ + +v+ +ea+v++   ++ ge    +++ r
     EPX74354.1 109 FVMNLRKTLMnTPNVTIVEATVNELLRDDSGEIIRGVAATR 149
                    44456666666678899999999888888777665555555 PP

>> GDI  GDP dissociation inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   6.4e-06    0.0055       3      36 ..       4      37 ..       1      40 [. 0.92

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 6.4e-06
                XEECEEEE--SHHHHHHHHHHHHTT--EEEE-SS CS
         GDI  3 eeydvivlGtGlkecilsGllsvdgkkvlhldrn 36
                ++ d+i++G+G++ c l+  l  +g+kvl+l+r+
  EPX74354.1  4 DDADIIIVGAGITGCALAAALGRQGRKVLVLERD 37
                567****************************996 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.2   9.5e-06    0.0081       2      31 ..       8      37 ..       7      63 .. 0.88

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 9.5e-06
                EEEECSSHHHHHHHHHHHHTTSEEEEEESS CS
   Pyr_redox  2 vvvvGgGyiglElAgalaelgkkVtvvers 31
                +++vG+G +g+ lA+al + g kV v+er 
  EPX74354.1  8 IIIVGAGITGCALAAALGRQGRKVLVLERD 37
                89*************************995 PP

>> ApbA  Ketopantoate reductase PanE/ApbA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.2   1.6e-05     0.013       1      30 [.       8      37 ..       8      46 .. 0.92

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.6e-05
                EEEES-SHHHHHHHHHHHHHTHCEEEE-SC CS
        ApbA  1 iailGaGaiGsllaakLakagadvtlilrs 30
                i i+GaG  G+ laa L ++g++v ++ r+
  EPX74354.1  8 IIIVGAGITGCALAAALGRQGRKVLVLERD 37
                89**********************999887 PP

>> Shikimate_DH  Shikimate / quinate 5-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.0   1.9e-05     0.016      11      77 ..       4      70 ..       1      84 [. 0.79

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.9e-05
                  TT-EEEEES-SHHHHHHHHHHHCCT-CEEEEEESSHHHHHHHHHHH.T.ET-EEEEGCGHHHHHHT-S CS
  Shikimate_DH 11 kekkvlliGaGemaelvakhLlakgvkkvvvaNRtlerakelaeel.kgeeiealkleelkellaead 77
                  +++ ++++GaG ++  +a +L ++g k v+v+ R+++  ++++ el +   ieal+   ++++++ +d
    EPX74354.1  4 DDADIIIVGAGITGCALAAALGRQGRK-VLVLERDMSEPDRIVGELlQPGGIEALEKIGIEDCIQGID 70
                  6889*****************998877.*********9999999984444455555555666666666 PP

>> TrkA_N  TrkA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.2   0.00013      0.11       1      33 [.       8      40 ..       8      66 .. 0.84
   2 ?    0.2   0.0      0.98   8.4e+02       6      47 ..     106     144 ..     103     150 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 0.00013
                EEEES-SHHHHHHHHHHHHTTEEEEEEESSHHH CS
      TrkA_N  1 iiiiGlGrvGrslaeeLseggkdvvvidkdeer 33
                iii+G+G +G +la  L ++g++v+v ++d + 
  EPX74354.1  8 IIIVGAGITGCALAAALGRQGRKVLVLERDMSE 40
                8******************7778******9765 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.98
                 -SHHHHHHHHHHHHTTEEEEEEESSHHHHHHH.HHTTSEEEES CS
      TrkA_N   6 lGrvGrslaeeLseggkdvvvidkdeerveel.reeglevvvg 47 
                 +Gr+ ++l ++L++   +v++++     v+el r++  e++ g
  EPX74354.1 106 YGRFVMNLRKTLMNTP-NVTIVEAT---VNELlRDDSGEIIRG 144
                 7999999999999977.5****985...344314444666665 PP

>> HI0933_like  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.3   5.3e-05     0.045       2      32 ..       7      37 ..       6      45 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 5.3e-05
                 SEEEE--SHHHHHHHHHHHHTT--EEEE-SS CS
  HI0933_like  2 dviviGgGaAGlmaAisaakrgkrVllleka 32
                 d+i++G+G  G   A++++++g++Vl+le+ 
   EPX74354.1  7 DIIIVGAGITGCALAAALGRQGRKVLVLERD 37
                 89**************************986 PP

>> DNase_II  Deoxyribonuclease II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0     8e-05     0.068     278     313 ..     284     319 ..     279     322 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 8e-05
    DNase_II 278 knknwvClgDinrkksqakrgggtvCiknkilwkaf 313
                 ++k ++++gD n++ +    gg+tvC++++ l ++f
  EPX74354.1 284 RTKGLILVGDSNNMRHPLTGGGMTVCFHDAYLLSRF 319
                 45789*************************999988 PP

>> Trp_halogenase  Tryptophan halogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.6   0.00054      0.46       1      59 [.       7      63 ..       7      81 .. 0.74
   2 ?   -2.7   0.0       2.3     2e+03     316     353 ..     286     323 ..     284     330 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00054
                    EEEEE--SHHHHHHHHHHHHHTTTSSEEEEEE-SSS.---SS-EE--THHHHTHHHHT-- CS
  Trp_halogenase  1 kivivGGGtaGwlaAaalakalkgklevtlveseei.gtvgvGeatipsirkllrlLgid 59
                    +i+ivG+G+ G   Aaal++++    +v+++e +   +   vGe + p   + l+ +gi+
      EPX74354.1  7 DIIIVGAGITGCALAAALGRQG---RKVLVLERDMSePDRIVGELLQPGGIEALEKIGIE 63
                    69********************...46999988754255567776666655556666665 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 2.3
                     TTEEE-CCCTEE--CCCS-HHHHHHHHHHHHHHT--BT CS
  Trp_halogenase 316 knvvalGlasgfvePlestsihliqaalrrLlallpdk 353
                     k+++++G+++    Pl + ++ +  ++++ L ++++ +
      EPX74354.1 286 KGLILVGDSNNMRHPLTGGGMTVCFHDAYLLSRFIAPN 323
                     78999******************999999999988765 PP

>> GMC_oxred_N  GMC oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.0    0.0016       1.4       2      40 ..       7      44 ..       6      59 .. 0.84
   2 ?    1.0   0.0      0.26   2.2e+02     202     257 ..     117     170 ..     107     172 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0016
  GMC_oxred_N  2 delveggGsagsvvAaRLsedpstsvlvleaggreknrl 40
                 d +++g+G++g+++Aa L  +++ +vlvle + +e +r 
   EPX74354.1  7 DIIIVGAGITGCALAAALGRQGR-KVLVLERDMSEPDRI 44
                 89****************99876.799999998888776 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.26
  GMC_oxred_N 202 alerpnleiltgakaekiilegrkkravGVeasdkkgtvkrlvvaakevvvaaGal 257
                   ++ pn++i+ +a+++ ++ ++ ++ + GV+a++k    + l+++a  ++v+ G +
   EPX74354.1 117 LMNTPNVTIV-EATVNELLRDDSGEIIRGVAATRKPDA-SLLSYKAPLTLVCDGCF 170
                  3588999999.999****99999********9998888.89999999999998865 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.2   0.00024       0.2       1      30 [.       9      37 ..       9      42 .. 0.95

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00024
  Pyr_redox_3  1 iIiGaGPaGlaaaielkkagledylilEkg 30
                 iI+GaG  G a a +l + g  ++l+lE++
   EPX74354.1  9 IIVGAGITGCALAAALGRQGR-KVLVLERD 37
                 8*******************9.7*****96 PP

>> NAD_Gly3P_dh_N  NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00032      0.28       2      35 ..       8      41 ..       7      50 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00032
                    EEEE--SHHHHHHHHHHHTTT--EEEE-S-HHHH CS
  NAD_Gly3P_dh_N  2 iavlGaGswGtalAkvlaenghevrlwvreeeli 35
                    i ++GaG  G alA++l+++g +v +  r+  + 
      EPX74354.1  8 IIIVGAGITGCALAAALGRQGRKVLVLERDMSEP 41
                    789**********************999987655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (458 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       357  (0.0199119); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                        21  (0.00117129); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              21  [number of targets reported over threshold]
# CPU time: 0.57u 0.28s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 3100.55
//
Query:       EPX74355.1  [L=79]
Description: hypothetical protein SOCG_05167 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1998  (0.11144); expected 358.6 (0.02)
Passed bias filter:                      641  (0.0357521); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.27s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 559.39
//
Query:       EPX74356.1  [L=57]
Description: plasma membrane proteolipid Pmp3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-22   79.5   9.6    1.7e-22   79.4   9.6    1.0  1  Pmp3      Proteolipid membrane potential modulator


Domain annotation for each model (and alignments):
>> Pmp3  Proteolipid membrane potential modulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.4   9.6   9.3e-27   1.7e-22       1      48 [.       7      54 ..       7      55 .. 0.98

  Alignments for each domain:
  == domain 1  score: 79.4 bits;  conditional E-value: 9.3e-27
        Pmp3  1 dillillaiilPPlaValksGcsadllinilLtllgylPgviHAfyii 48
                di++i+ aiilPPl+V+l++Gc+ad++inilL++lgy+Pg+iHA+yii
  EPX74356.1  7 DIFKIIFAIILPPLGVFLERGCGADIIINILLCCLGYVPGIIHALYII 54
                89*********************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (57 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       315  (0.0175693); expected 358.6 (0.02)
Passed bias filter:                      181  (0.0100954); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.24s 00:00:00.59 Elapsed: 00:00:00.40
# Mc/sec: 424.28
//
Query:       EPX74357.1  [L=132]
Description: TIM23 translocase complex subunit Tim16 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-34  117.8   0.9    3.3e-34  117.6   0.9    1.0  1  Pam16     Pam16
  ------ inclusion threshold ------
      0.084   12.7   4.0        4.8    6.9   0.7    2.4  3  SurA_N_3  SurA N-terminal domain


Domain annotation for each model (and alignments):
>> Pam16  Pam16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.6   0.9   3.7e-38   3.3e-34       8     123 ..       9     126 ..       3     132 .] 0.87

  Alignments for each domain:
  == domain 1  score: 117.6 bits;  conditional E-value: 3.7e-38
                 XXXXXXXXXXXXXXXXXXXXXX.XXXXXXXX.XXXXXXXXXXXXXX.XX-HHHHHHHHT--G.--SHHHHHHHHHHHHHHT-CCCTS-HHHHHHHHHHH CS
       Pam16   8 kvivagtqvvgkalaralrqeiaaaraaadartsasereaaksnlk.Gisleeslkilnvee.dlnreevekryehlfevndkskGGslylqskvfrak 104
                 k i++g+qv+++a+ +a++q +a a++++   ++a++ e+ak   +  i++ e+  ilnv++ +ln+ee+e+r++ +f++nd + GGs+ylqskvfra+
  EPX74357.1   9 KFIIVGSQVMSRAFIQAYKQMVANASQQNTGASQAGNAEKAKVARRgEITMREAGDILNVNTdPLNKEELEQRFQRMFKINDPKAGGSFYLQSKVFRAH 107
                 889*******************9888888878999**99999888736*************989*********************************** PP

                 HHHHHHHHHHH-XXXXXXX CS
       Pam16 105 erldeelkieekeekkkee 123
                 erl eelk++e ee + ++
  EPX74357.1 108 ERLMEELKQNEPEETNEKQ 126
                 *******999877654322 PP

>> SurA_N_3  SurA N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.7   0.00054       4.8      46      84 ..      14      52 ..       6      58 .. 0.82
   2 ?    6.9   0.1   0.00054       4.9      37      73 ..      61      97 ..      51     118 .. 0.78
   3 ?   -1.2   0.0      0.18   1.6e+03      53      79 ..     102     128 ..      92     131 .. 0.63

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.00054
    SurA_N_3 46 gekIsraefqqayrrqleqlrqqlggnldaelldelglr 84
                g++++ + f qay++++ +++qq+ g+ +a  ++++++ 
  EPX74357.1 14 GSQVMSRAFIQAYKQMVANASQQNTGASQAGNAEKAKVA 52
                56778889999************9888888887776665 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.00054
    SurA_N_3 37 sgnsvakVngekIsraefqqayrrqleqlrqqlggnl 73
                +++++  Vn +++ ++e++q+++r+ +    + gg++
  EPX74357.1 61 EAGDILNVNTDPLNKEELEQRFQRMFKINDPKAGGSF 97
                446699******************9988777777655 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 0.18
    SurA_N_3  53 efqqayrrqleqlrqqlggnldaelld 79 
                 ++ +a++r +e+l+q+  ++ ++++ +
  EPX74357.1 102 KVFRAHERLMEELKQNEPEETNEKQGQ 128
                 555677777777777665555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1251  (0.0697752); expected 358.6 (0.02)
Passed bias filter:                      568  (0.0316805); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 1002.89
//
Query:       EPX74358.1  [L=399]
Description: hypothetical protein SOCG_03567 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0023   18.0   4.4     0.0023   18.0   4.4    4.3  4  Exonuc_VII_S     Exonuclease VII small subunit
  ------ inclusion threshold ------
      0.091   12.7   2.3       0.11   12.4   0.1    2.3  2  Surfac_D-trimer  Lung surfactant protein D coiled-coil trimer


Domain annotation for each model (and alignments):
>> Exonuc_VII_S  Exonuclease VII small subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   2.2      0.33   2.9e+03      36      49 ..       8      21 ..       5      23 .. 0.81
   2 ?    2.0   0.1     0.025   2.2e+02       9      23 ..     170     184 ..     170     186 .. 0.89
   3 ?   -1.5   1.5       0.3   2.7e+03       8      20 ..     194     206 ..     188     238 .. 0.65
   4 !   18.0   4.4   2.6e-07    0.0023       6      47 ..     311     352 ..     308     357 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.33
  Exonuc_VII_S 36 lkeCekkLdeaeqk 49
                  l+ ++++L+ea++k
    EPX74358.1  8 LALAKQRLQEAKKK 21
                  66789999999997 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.025
  Exonuc_VII_S   9 eeIvekLEsgelsLe 23 
                   +e v+kLE+  lsL 
    EPX74358.1 170 QETVKKLEKKALSLK 184
                   589*********995 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 0.3
  Exonuc_VII_S   8 LeeIvekLEsgel 20 
                   L+  v+kLE+ +l
    EPX74358.1 194 LDSTVKKLEELKL 206
                   7777888875444 PP

  == domain 4  score: 18.0 bits;  conditional E-value: 2.6e-07
  Exonuc_VII_S   6 aeLeeIvekLEsgelsLeeslklyeeGvkLlkeCekkLdeae 47 
                   + Le+ v+ L  ++  Lee+++ y+ ++   +eC+++L e +
    EPX74358.1 311 QSLETQVRDLKGEKQYLEEAIERYKAAMDEFAECQQQLRELQ 352
                   579***********************************9976 PP

>> Surfac_D-trimer  Lung surfactant protein D coiled-coil trimerisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   1.2e-05      0.11       3      29 ..     312     338 ..     310     339 .. 0.93
   2 ?   -3.5   0.4       1.1   9.9e+03      14      20 ..     347     353 ..     344     357 .. 0.61

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.2e-05
                      HHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Surfac_D-trimer   3 aLrQrveaLeGklqrLqnafsqYkKav 29 
                      +L  +v+ L+G+ q L+ a+ +Yk a+
       EPX74358.1 312 SLETQVRDLKGEKQYLEEAIERYKAAM 338
                      7999********************986 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 1.1
                      HHHHHHH CS
  Surfac_D-trimer  14 klqrLqn 20 
                      +l+ Lqn
       EPX74358.1 347 QLRELQN 353
                      5666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (399 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      4117  (0.229628); expected 358.6 (0.02)
Passed bias filter:                      758  (0.0422779); expected 358.6 (0.02)
Passed Vit filter:                       423  (0.0235931); expected 17.9 (0.001)
Passed Fwd filter:                       145  (0.00808746); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 2.85u 0.54s 00:00:03.39 Elapsed: 00:00:00.82
# Mc/sec: 1464.36
//
Query:       EPX74359.1  [L=71]
Description: TOM complex assembly protein Mim1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.7e-16   58.5   0.1    5.1e-16   58.4   0.1    1.1  1  TOM13     Outer membrane protein TOM13


Domain annotation for each model (and alignments):
>> TOM13  Outer membrane protein TOM13
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.4   0.1   2.9e-20   5.1e-16      35      83 ..      14      64 ..       2      65 .. 0.85

  Alignments for each domain:
  == domain 1  score: 58.4 bits;  conditional E-value: 2.9e-20
       TOM13 35 ptllsllrsaainlvLPFinGlmLGfGellAhEiafrlgW..sgtkvfPes 83
                 +++++l+ +ainl LPF+nG+mLGfGe++Ah + + lgW    t+++  +
  EPX74359.1 14 TQVIQVLKYTAINLGLPFLNGIMLGFGEIFAHAFIHSLGWapGHTRIYSIQ 64
                5799************************************66567887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       286  (0.0159518); expected 358.6 (0.02)
Passed bias filter:                      228  (0.0127168); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.27s 00:00:00.65 Elapsed: 00:00:00.43
# Mc/sec: 493.68
//
Query:       EPX74360.1  [L=594]
Description: vacuolar polyphosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.75   10.3  12.8        3.6    8.1   8.9    2.4  2  SRP72     SRP72 RNA-binding domain


Domain annotation for each model (and alignments):
>> SRP72  SRP72 RNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   8.9    0.0002       3.6      11      39 ..     460     488 ..     451     490 .. 0.85
   2 ?    3.3   0.1    0.0063   1.1e+02      21      30 ..     560     569 ..     516     574 .. 0.75

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0002
       SRP72  11 tatsekgkkkkrkkkrkRkvklPKnydpg 39 
                 t++ e  kkk+rkkk+k+k ++ K+ +pg
  EPX74360.1 460 TSDYESMKKKSRKKKKKKKNRRKKKIQPG 488
                 55667889999**************9997 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.0063
       SRP72  21 krkkkrkRkv 30 
                  +kkk+kR+ 
  EPX74360.1 560 NKKKKKKRRY 569
                 2345555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (594 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1121  (0.0625244); expected 358.6 (0.02)
Passed bias filter:                      685  (0.0382063); expected 358.6 (0.02)
Passed Vit filter:                        69  (0.00384851); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.31s 00:00:01.00 Elapsed: 00:00:00.47
# Mc/sec: 3771.58
//
Query:       EPX74361.1  [L=776]
Description: DNA ligase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.8e-56  188.8   0.9    2.4e-55  187.4   0.1    1.9  2  DNA_ligase_A_M   ATP dependent DNA ligase domain
    7.6e-34  117.5   0.0    1.4e-33  116.6   0.0    1.5  1  DNA_ligase_A_N   DNA ligase N terminus
    1.4e-15   57.7   0.0      3e-15   56.6   0.0    1.6  1  DNA_ligase_A_C   ATP dependent DNA ligase C terminal region
  ------ inclusion threshold ------
      0.028   14.2   0.2        2.6    7.8   0.0    2.4  2  mRNA_cap_enzyme  mRNA capping enzyme, catalytic domain


Domain annotation for each model (and alignments):
>> DNA_ligase_A_M  ATP dependent DNA ligase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.21   9.3e+02     122     169 ..     345     399 ..     322     402 .. 0.85
   2 !  187.4   0.1   5.3e-59   2.4e-55       1     204 []     411     619 ..     411     619 .. 0.96

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.21
                     EEEETTEEH.......TTSCHHHHHHHHHHHB--BTTTEEE--EEEESSHHHHHH CS
  DNA_ligase_A_M 122 iLyldgesl.......tdeplkeRrklLeeilkesedrvelaeslevkdveelee 169
                     i+y d+e l       ++e++++  + L++ + + +d   l+++l ++ +++l++
      EPX74361.1 345 IIYSDYERLanlgsasLQEEFQKAEEALKQSFYQVPDYNILVKTLLTTGLNDLTQ 399
                     6778888887888888999999999*****9999999999999999988888766 PP

  == domain 2  score: 187.4 bits;  conditional E-value: 5.3e-59
                     -EEEEEESCHHHHHHHTTTSEEEEEEEESSEEEEEEE.ETTEEEEEETTS-B-GGGCHHHHHHHHHHBSTTESEEEEEEEEEEEETTTTCBEHHH CS
  DNA_ligase_A_M   1 pmLAeslksiekalkkleekafivEiKyDGeRaqvhk.egdkvklfSRrlkditaakpelvkalkeafkkdeksvilDGElvavdketgeilpfq 94 
                     pmL + +k+++++l+kl++ +f +E KyDG+Raqvhk ++++vk+fSR l++i++++p++++  + a k +  ++i++GElva+d ++g+il+fq
      EPX74361.1 411 PMLGSITKNLQEMLHKLKGHNFCCEFKYDGQRAQVHKsKTGEVKIFSRHLEEISERYPDVIESCQIAQKTN-ADYIIEGELVAIDSKSGQILDFQ 504
                     9************************************9**************************7666665.7********************** PP

                     HHCHHHHCHCCTHHHHHHSEEEEEEEEEEEETTEEHTTSCHHHHHHHHHHHB--BTTTEEE--EEEESSHHHHHHHHHHHHHTTECEEEEEE... CS
  DNA_ligase_A_M  95 klasrkkkkkkveeklkeaelclfvFDiLyldgesltdeplkeRrklLeeilkesedrvelaeslevkdveeleelleeaiseglEGlvvKn... 186
                     +l++r++kk++++e+  ++++c+f+FD++y+ gesl++ pl+ Rr+ + e ++ ++++++la sle k+   ++e+++ ai++++EGl+vK    
      EPX74361.1 505 TLSTRERKKVNLNEI--TVHVCFFIFDMMYFKGESLLQCPLSVRRRNIIESFNIIPNQFQLAASLESKEEAAIQEFFNLAINSKCEGLMVKVldg 597
                     ***************..***********************************9**************************************9777 PP

                     ....TT-CC-TTCEEEEEEEEE CS
  DNA_ligase_A_M 187 ....pdskYepgkrsknwlKvK 204
                           s+Yep+kr+++w+KvK
      EPX74361.1 598 inskLPSTYEPDKRGEGWIKVK 619
                     66667789*************9 PP

>> DNA_ligase_A_N  DNA ligase N terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.6   0.0   3.2e-37   1.4e-33       1     172 [.     165     340 ..     165     341 .. 0.96

  Alignments for each domain:
  == domain 1  score: 116.6 bits;  conditional E-value: 3.2e-37
                     BCHHHHHHHHHHCC.---HHHHHHHHHHHHHTS-..SHHHHHHHHHH....SS-CCCS------HHHHHHHHHHHHT--HHHHHHHHHHHS-HHH CS
  DNA_ligase_A_N   1 pFaelaelfekieestkkrlekrailanffrkvesagpedlypalrL....llPdydgreygigesllakalaealglskkkikdalakvgDlge 91 
                     p++ la++f  i++ tk+r++++ +l+n++  + + ++++l++a++L    ++P++ g+++g+g+ + +kal e++g+s++++k+  +++gD g+
      EPX74361.1 165 PYSFLANTFVLISS-TKSRIRIVTLLTNCLLFLLHIEKDSLLSAVWLstndIAPSFYGKNLGVGPAMYSKALKEVCGISSQSLKNLWNRHGDPGD 258
                     7999**********.99************94444556779**********************************************999****** PP

                     HHHHHHCCHHHH------BHHHHHHHHHHHHH-.STTHHHHHHHHHHHHHHHS-HHHHHHHHHHHCT---SS--HHHHHHHH CS
  DNA_ligase_A_N  92 vaeevlskrstlakkspltieevnelLdklaaa.gkgsedekkkilkkllkraspeEakyliriilkdlriglsektvldal 172
                     va+e++ + +tl++++plti++v+++L k+a   g+g +++k ++ k ll +a++eE++y+ r i ++lrig+ ++t+l al
      EPX74361.1 259 VAYEAKVSVRTLFQPQPLTIKKVFSTLLKIADCiGNGAQNRKLELTKYLLISAKAEEVRYIGRSIMQNLRIGAVQNTMLTAL 340
                     *******************************999**********************************************99 PP

>> DNA_ligase_A_C  ATP dependent DNA ligase C terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.6   0.0   6.8e-19     3e-15       2      99 .]     644     756 ..     643     756 .. 0.85

  Alignments for each domain:
  == domain 1  score: 56.6 bits;  conditional E-value: 6.8e-19
                     GGSEEEEEEEEEE..TTEEEEEEEE-SS--HHHHHHHHHHHGGGEECTTCESS---HHHHTT...EEE-TT-EEEEEESEEECTSSSTT...... CS
  DNA_ligase_A_C   2 gglvgslllgvyd..dgkleyvgkvgtGfsdaeleelrkklkelerkkppfaekvpeeekrd...vWvePelvveVkfaeitasgkyka...... 85 
                     +g+++ +ll+v +  + ++e v+k+ +Gfsd+ ++e++++++ l+  +++ +  + ++ +r       + + v+eVk+a+it s+ yka      
      EPX74361.1 644 AGWFSPILLAVFNpeNATYEAVCKCMSGFSDQFYKEITDRYS-LDSGNSSPCVLTCPHAMRGlieILASADEVWEVKGAQITSSPVYKAgiglad 737
                     799**********98888***********************6.55554444344444445555755577************************** PP

                     .....EECT-EEEEE-TTS CS
  DNA_ligase_A_C  86 .....slRfPrfkrlReDk 99 
                          s+RfPrf+++R+Dk
      EPX74361.1 738 edrglSIRFPRFIKIRSDK 756
                     ******************8 PP

>> mRNA_cap_enzyme  mRNA capping enzyme, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0    0.0092        41       8      82 ..     422     494 ..     415     509 .. 0.81
   2 ?    7.8   0.0   0.00059       2.6      89     121 ..     521     553 ..     511     591 .. 0.76

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.0092
                      THHHHHHHS-EEEEEEESSEEEEEEEEECTEEEEEEETTS-EEEESSST-BTTSSSST.CTSBGGSEEEEEEEE.EE CS
  mRNA_cap_enzyme   8 enlekLkqkkYvvseKaDGiRylmllteeeegvylidRenevyrvenlrfprekdkek.lekvldetllDgElv.id 82 
                      e l+kLk +++    K DG R  +   ++ e v ++ R+ e  +++  r+p   ++ +  +k   + ++ gElv id
       EPX74361.1 422 EMLHKLKGHNFCCEFKYDGQRAQVHKSKTGE-VKIFSRHLE--EIS-ERYPDVIESCQiAQKTNADYIIEGELVaID 494
                      6789*******************99988855.******877..555.578877766556889999999999998455 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.00059
                      EEEEEEEEEEEEETTEEGTTSBHHHHHHHHHHH CS
  mRNA_cap_enzyme  89 kelryliyDivaingvtvaeeplskRleilkke 121
                       ++ + i+D++ ++g ++ ++pls R + +  +
       EPX74361.1 521 VHVCFFIFDMMYFKGESLLQCPLSVRRRNIIES 553
                      567899******************765544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (776 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       601  (0.0335211); expected 358.6 (0.02)
Passed bias filter:                      485  (0.0270511); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.65u 0.29s 00:00:00.94 Elapsed: 00:00:00.45
# Mc/sec: 5166.39
//
Query:       EPX74362.1  [L=299]
Description: MAPK organizer 1 family WD repeat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.4e-19   68.5   7.2    1.3e-05   25.8   0.1    6.6  7  WD40           WD domain, G-beta repeat
    3.7e-11   43.2   0.3       0.12   12.7   0.0    5.7  6  ANAPC4_WD40    Anaphase-promoting complex subunit 4 WD40 doma
    1.8e-07   30.7   0.4      0.011   15.6   0.1    4.9  5  PQQ            PQQ enzyme repeat
    1.3e-06   28.0   3.0    9.6e-05   21.8   0.4    3.1  3  WD40_like      WD40-like domain
    6.5e-06   25.9   0.0      0.078   12.5   0.0    3.1  3  PQQ_2          PQQ-like domain
    1.4e-05   25.1   0.3        1.7    8.5   0.0    3.8  4  eIF2A          Eukaryotic translation initiation factor eIF2A
    4.8e-05   22.9   0.2     0.0015   18.1   0.0    2.8  3  DUF5046        Domain of unknown function (DUF5046)
    0.00034   20.6   0.4          2    8.5   0.0    4.2  4  BBS2_Mid       Ciliary BBSome complex subunit 2, middle regio
  ------ inclusion threshold ------
       0.18   10.8   1.2        4.4    6.2   0.0    2.9  4  Coatomer_WDAD  Coatomer WD associated region


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4   0.0    0.0092        18      16      36 ..      20      40 ..       6      42 .. 0.86
   2 !   16.1   0.1   8.1e-06     0.016       4      38 .]      49      84 ..      46      84 .. 0.83
   3 !   25.8   0.1   6.5e-09   1.3e-05       1      38 []      88     126 ..      88     126 .. 0.95
   4 ?    4.3   0.0     0.043        86      24      38 .]     154     168 ..     134     168 .. 0.70
   5 ?   -0.2   0.1       1.1   2.1e+03      11      25 ..     181     195 ..     172     206 .. 0.76
   6 !   13.2   0.0   6.4e-05      0.13      15      38 .]     231     252 ..     212     252 .. 0.72
   7 ?   -0.8   0.1       1.7   3.3e+03      12      28 ..     269     285 ..     256     294 .. 0.66

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0092
                EEEETTSSEEEEEETTSEEEE CS
        WD40 16 lafspdgawlasGsdDgtvri 36
                +++++ g++l++++ D+ vr+
  EPX74362.1 20 IKYNSTGNYLLCAGNDRVVRL 40
                568999***999999****97 PP

  == domain 2  score: 16.1 bits;  conditional E-value: 8.1e-06
                EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38
                +r++ +H + + +l+   d++ +as++ D+ v++Wd
  EPX74362.1 49 IREYMAHsFEIMDLDIVTDSTRFASCGGDRFVHVWD 84
                788889*555*****8889999998766*******9 PP

  == domain 3  score: 25.8 bits;  conditional E-value: 6.5e-09
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 gq +r++  H   v+ ++++++++ lasGs D +vr+Wd
  EPX74362.1  88 GQVIRKFGSHlARVNTVCYNQESSILASGSFDSKVRLWD 126
                 678999****999*************************9 PP

  == domain 4  score: 4.3 bits;  conditional E-value: 0.043
                 EEEEEETTSEEEEEE CS
        WD40  24 wlasGsdDgtvriWd 38 
                  +++Gs Dg++r +d
  EPX74362.1 154 KIIAGSTDGNIRTYD 168
                 3568*99****9666 PP

  == domain 5  score: -0.2 bits;  conditional E-value: 1.1
                 SSEEEEEEETTSSEE CS
        WD40  11 ssvtslafspdgawl 25 
                 +++ts+ +s+ ga+ 
  EPX74362.1 181 NPITSIWTSKTGAFA 195
                 579***999999984 PP

  == domain 6  score: 13.2 bits;  conditional E-value: 6.4e-05
                 EEEEETTSSEEEEEETTSEEEEEE CS
        WD40  15 slafspdgawlasGsdDgtvriWd 38 
                 +l  +   ++++sGs+Dg++ +Wd
  EPX74362.1 231 CL--DYMERYVISGSEDGKILVWD 252
                 55..33345699***********9 PP

  == domain 7  score: -0.8 bits;  conditional E-value: 1.7
                 SEEEEEEETTSSEEEEE CS
        WD40  12 svtslafspdgawlasG 28 
                  v+++  +p+++ +a+ 
  EPX74362.1 269 IVSDIVSHPSSDSFAAT 285
                 37888899999988754 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   0.0   5.9e-05      0.12      34      82 ..      10      58 ..       2      67 .. 0.87
   2 ?    1.2   0.0      0.23   4.5e+02      42      77 ..      60      95 ..      55     100 .. 0.79
   3 !    9.5   0.1   0.00061       1.2      36      73 ..      96     133 ..      80     153 .. 0.74
   4 !    6.1   0.0    0.0066        13      52      76 ..     154     178 ..     136     190 .. 0.78
   5 ?    2.8   0.0     0.071   1.4e+02      41      81 ..     183     223 ..     177     237 .. 0.76
   6 ?    5.4   0.0     0.011        23      51      82 ..     237     268 ..     231     276 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 5.9e-05
  ANAPC4_WD40 34 edkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksek 82
                 ++ke++  + ++++  g+ L  a +d  vrll++++g  ++++ ++s +
   EPX74362.1 10 STKEKEPLNVIKYNSTGNYLLCAGNDRVVRLLNSKTGAYIREYMAHSFE 58
                 5678899999*******************************99998764 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.23
  ANAPC4_WD40 42 rsLaWkpdgklLavaysdgevrlldaesgkvvhsls 77
                  +L    d + +a    d  v++ d+++g+v++++ 
   EPX74362.1 60 MDLDIVTDSTRFASCGGDRFVHVWDVSTGQVIRKFG 95
                 55666667777888889999************9986 PP

  == domain 3  score: 9.5 bits;  conditional E-value: 0.00061
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvv 73 
                  ++  +v+ ++++++ ++La +  d++vrl d  s   +
   EPX74362.1  96 SHLARVNTVCYNQESSILASGSFDSKVRLWDCRSSSSI 133
                  566789************************99877654 PP

  == domain 4  score: 6.1 bits;  conditional E-value: 0.0066
  ANAPC4_WD40  52 lLavaysdgevrlldaesgkvvhsl 76 
                   +  +  dg++r +d+ +gk++  +
   EPX74362.1 154 KIIAGSTDGNIRTYDIRNGKLLTDS 178
                  3567899*************99865 PP

  == domain 5  score: 2.8 bits;  conditional E-value: 0.071
  ANAPC4_WD40  41 vrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  ++s+  ++ g +  +++  ++ +lld e+g +++s+s k++
   EPX74362.1 183 ITSIWTSKTGAFALISILHSSNHLLDLENGAILKSYSGKKN 223
                  66666677788888888888999***********9987766 PP

  == domain 6  score: 5.4 bits;  conditional E-value: 0.011
  ANAPC4_WD40  51 klLavaysdgevrlldaesgkvvhslsvksek 82 
                  +    + +dg++ + d+esg+ + s+s+ + +
   EPX74362.1 237 RYVISGSEDGKILVWDMESGEQLTSISTPNMS 268
                  6677899****************999987765 PP

>> PQQ  PQQ enzyme repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.056   1.1e+02       3      23 ..      28      49 ..      26      54 .. 0.78
   2 ?   -0.7   0.0      0.82   1.6e+03      16      24 ..      84      92 ..      74      95 .. 0.76
   3 !   15.6   0.1   5.5e-06     0.011       1      23 [.     153     175 ..     153     178 .. 0.93
   4 ?    0.2   0.0      0.43   8.7e+02      15      26 ..     207     218 ..     205     219 .. 0.90
   5 ?    4.3   0.0     0.021        41       3      25 ..     239     261 ..     238     266 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.056
                EEEE.ETTSEEEEEETTTCCEE CS
         PQQ  3 vylg.sadGylyAlDadTGkvl 23
                + l+  +d +++ l+ +TG  +
  EPX74362.1 28 YLLCaGNDRVVRLLNSKTGAYI 49
                556679999**********876 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.82
                ETTTCCEEE CS
         PQQ 16 DadTGkvlW 24
                D++TG+v+ 
  EPX74362.1 84 DVSTGQVIR 92
                899999875 PP

  == domain 3  score: 15.6 bits;  conditional E-value: 5.5e-06
                 TEEEEEETTSEEEEEETTTCCEE CS
         PQQ   1 gvvylgsadGylyAlDadTGkvl 23 
                 +++++gs dG+++ +D+++Gk+l
  EPX74362.1 153 DKIIAGSTDGNIRTYDIRNGKLL 175
                 6899*****************98 PP

  == domain 4  score: 0.2 bits;  conditional E-value: 0.43
                 EETTTCCEEEEE CS
         PQQ  15 lDadTGkvlWrf 26 
                 lD+++G +l ++
  EPX74362.1 207 LDLENGAILKSY 218
                 8*******9988 PP

  == domain 5  score: 4.3 bits;  conditional E-value: 0.021
                 EEEEETTSEEEEEETTTCCEEEE CS
         PQQ   3 vylgsadGylyAlDadTGkvlWr 25 
                 v+ gs dG+++  D+++G+ l +
  EPX74362.1 239 VISGSEDGKILVWDMESGEQLTS 261
                 567899*************9987 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.11   2.1e+02       5      36 ..      19      50 ..      15      93 .. 0.77
   2 !   21.8   0.4   4.8e-08   9.6e-05       4      88 ..     102     186 ..      57     196 .. 0.84
   3 ?    4.0   0.0     0.013        26     202     239 ..     232     270 ..     189     295 .. 0.59

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.11
   WD40_like  5 sidiskkgslilyGgkddkctvlkleslesvs 36
                 i ++  g+++l  g+d  +++l+ +++  + 
  EPX74362.1 19 VIKYNSTGNYLLCAGNDRVVRLLNSKTGAYIR 50
                68889999999999999999998888876654 PP

  == domain 2  score: 21.8 bits;  conditional E-value: 4.8e-08
   WD40_like   4 YsidiskkgslilyGgkddkctvlklesl..esvsivesfedSvifvklldddlilvvtlDGtillslleneeevenekieedistv 88 
                  ++ +++++s+++ G+ d k+++ + +s   + v+++++ +dSv  +  +++d+i+ ++ DG+i +++++n++   + +  + i+ +
  EPX74362.1 102 NTVCYNQESSILASGSFDSKVRLWDCRSSssIPVQVLNEAKDSVSTID-IKEDKIIAGSTDGNIRTYDIRNGK-LLTDSFTNPITSI 186
                 567789999999999999999999998761145788999999999876.799999999999999999999998.4455566666655 PP

  == domain 3  score: 4.0 bits;  conditional E-value: 0.013
   WD40_like 202 illvddylivGgsfkyllliNiklnvntfklrl.evegi 239
                 + +++ y+i+G +   +l+  +++  +   ++  +++ +
  EPX74362.1 232 LDYMERYVISGSEDGKILVWDMESGEQLTSISTpNMSIV 270
                 444444444444444444444444433333333333333 PP

>> PQQ_2  PQQ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.8   0.0    0.0093        18     176     236 ..      28      93 ..       6      94 .. 0.68
   2 !   12.5   0.0   3.9e-05     0.078      98     147 ..     123     177 ..      97     191 .. 0.81
   3 !    5.0   0.0     0.008        16     122     170 ..     236     278 ..     205     298 .. 0.52

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0093
       PQQ_2 176 Vyassgqgrllal.dlatgr..rlwskeissinglpildgdllyvvsa..gelialdratGavlWk 236
                  + ++g+ r++ l + +tg   r++     +i+ l+i+++ + + +      ++ +d++tG+v++k
  EPX74362.1  28 YLLCAGNDRVVRLlNSKTGAyiREYMAHSFEIMDLDIVTDSTRFASCGgdRFVHVWDVSTGQVIRK 93 
                 445566666788888888885444434444588888888888886664677788899999998776 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 3.9e-05
       PQQ_2  98 rlWstqqrseepaelrssaspava.....gdtvvvgessgklvaldpkdGkvlWe 147
                 rlW   ++s+ p+ ++  a+++v+      d++++g ++g++  +d+++Gk+l +
  EPX74362.1 123 RLWDCRSSSSIPVQVLNEAKDSVStidikEDKIIAGSTDGNIRTYDIRNGKLLTD 177
                 678877777655556666666666677989*********************9865 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.008
       PQQ_2 122 gdtvvvgessgklvaldpkdGkvlWerelaaprgtselsrvgdisgrpv 170
                   +v+ g ++gk+ + d ++G++l + +   p+    +s v di + p 
  EPX74362.1 236 ERYVISGSEDGKILVWDMESGEQLTSIST--PN----MSIVSDIVSHPS 278
                 44555555555555555555555444433..22....223444444444 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   0.0   0.00087       1.7      93     119 ..       7      33 ..       1      45 [. 0.87
   2 !    8.2   0.0    0.0011       2.1      61     136 ..      58     131 ..      37     148 .. 0.79
   3 ?    0.9   0.0      0.18   3.5e+02      75     118 ..     154     198 ..     130     224 .. 0.72
   4 ?    2.7   0.0     0.052     1e+02     123     164 ..     244     288 ..     220     293 .. 0.70

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00087
                 EEEEEEEEES--EEEE-TTSSEEEEE- CS
       eIF2A  93 kviskleeqkrNtiffspkgklvllaG 119
                 +++s+ e+++ N i+++++g+++l aG
  EPX74362.1   7 RQVSTKEKEPLNVIKYNSTGNYLLCAG 33 
                 567888999****************99 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.0011
                 .EEEEEE-TTSS-EEEEESSSSCEEEEEECS.CEEEEEEEEE..S--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTE CS
       eIF2A  61 pihdvaWspkskefaviyGkmpakvslfdlk.vkviskleeq..krNtiffspkgklvllaGfgnlaGeleiwdvkkkk 136
                 +i d+   ++s++fa + G  ++ v+++d+  ++vi k++++  + Nt+ ++++  +++ + f +   ++ +wd  + +
  EPX74362.1  58 EIMDLDIVTDSTRFASCGG--DRFVHVWDVStGQVIRKFGSHlaRVNTVCYNQESSILASGSFDS---KVRLWDCRSSS 131
                 5667777778899999998..5899****96599999*99863368************9999976...47778776555 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.18
                 EEEESSSSCEEEEEECS.CEEEEEEEEES--EEEE-TTSSEEEEE CS
       eIF2A  75 aviyGkmpakvslfdlk.vkviskleeqkrNtiffspkgklvlla 118
                  +i G  + ++  +d + +k++++  +++  +i  s++g + l++
  EPX74362.1 154 KIIAGSTDGNIRTYDIRnGKLLTDSFTNPITSIWTSKTGAFALIS 198
                 577777777777777744677776666666666666666665554 PP

  == domain 4  score: 2.7 bits;  conditional E-value: 0.052
                 SS-EEEEEETT...TTEEEEEEE-TT--EEEE-TTSSEEEEEE-T CS
       eIF2A 123 laGeleiwdvk...kkkkiakaeaanatlvewspdgryvlTatta 164
                   G++ +wd++   ++++i++ + +  +++  +p+++ ++  tt+
  EPX74362.1 244 EDGKILVWDMEsgeQLTSISTPNMSIVSDIVSHPSSDSFAATTTH 288
                 469999999994444444445555555555666777766666665 PP

>> DUF5046  Domain of unknown function (DUF5046)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.39   7.7e+02      89     115 ..      66      92 ..      18     145 .. 0.63
   2 !   18.1   0.0   7.4e-07    0.0015      79     123 ..     140     184 ..     112     205 .. 0.83
   3 ?    0.4   0.0      0.18   3.5e+02      26      47 ..     243     264 ..     238     273 .. 0.80

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.39
     DUF5046  89 ardktvavyatdgilrvydkttGallt 115
                 +++   a    d  ++v+d +tG+++ 
  EPX74362.1  66 TDSTRFASCGGDRFVHVWDVSTGQVIR 92 
                 344455556666666666666666654 PP

  == domain 2  score: 18.1 bits;  conditional E-value: 7.4e-07
     DUF5046  79 GektpvydvdardktvavyatdgilrvydkttGalltdvevepve 123
                  +k +v  +d +++++   +tdg +r yd  +G+lltd   +p+ 
  EPX74362.1 140 EAKDSVSTIDIKEDKIIAGSTDGNIRTYDIRNGKLLTDSFTNPIT 184
                 46778889******************************9988875 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.18
     DUF5046  26 tedgryelidlastedsellat 47 
                 +edg+  + d++s+e+   ++t
  EPX74362.1 243 SEDGKILVWDMESGEQLTSIST 264
                 5899999999999999888877 PP

>> BBS2_Mid  Ciliary BBSome complex subunit 2, middle region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.48   9.5e+02      11      31 ..      25      45 ..      17      73 .. 0.71
   2 ?    1.4   0.0      0.16   3.3e+02      63      84 ..     116     137 ..     114     146 .. 0.76
   3 !    8.5   0.0     0.001         2       5      29 ..     148     169 ..     144     224 .. 0.72
   4 ?    4.8   0.0     0.014        27      12      68 ..     236     297 ..     228     299 .] 0.69

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.48
    BBS2_Mid 11 geneLvvgsddfeirvfkeee 31
                  n+L+ + +d  +r+++ ++
  EPX74362.1 25 TGNYLLCAGNDRVVRLLNSKT 45
                358999999***999998763 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.16
    BBS2_Mid  63 gvyekkerlWrvksknevvala 84 
                 g +++k rlW  +s++++    
  EPX74362.1 116 GSFDSKVRLWDCRSSSSIPVQV 137
                 56999********999865444 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.001
    BBS2_Mid   5 advdgdgeneLvvgsddfeirvfke 29 
                 +d++   e+++++gs+d +ir ++ 
  EPX74362.1 148 IDIK---EDKIIAGSTDGNIRTYDI 169
                 4444...469************963 PP

  == domain 4  score: 4.8 bits;  conditional E-value: 0.014
    BBS2_Mid  12 eneLvvgsddfeirvfkee..elvaeitete.kvv..slarlekerfayaleNGtvgvyekk 68 
                 e++++ gs+d +i v++ e  e ++ i++ +  +v  ++++ ++++fa++   G v vy+ +
  EPX74362.1 236 ERYVISGSEDGKILVWDMEsgEQLTSISTPNmSIVsdIVSHPSSDSFAATTTHGDVLVYQYT 297
                 568899********998764444555544330333223455566779999999999999865 PP

>> Coatomer_WDAD  Coatomer WD associated region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       1.8   3.6e+03      35      53 ..      17      35 ..       4      46 .. 0.64
   2 ?    0.1   0.0      0.16   3.1e+02     125     160 ..      77     114 ..      74     122 .. 0.81
   3 ?    6.2   0.0    0.0022       4.4     104     162 ..     145     198 ..     115     212 .. 0.73
   4 ?    0.7   0.0       0.1   2.1e+02     120     172 ..     240     296 ..     210     299 .] 0.74

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 1.8
                   XXXXXXXXXXXXXXXXXXX CS
  Coatomer_WDAD 35 pqslshnpngrfvlVcgdg 53
                    + +++n +g+++l  g++
     EPX74362.1 17 LNVIKYNSTGNYLLCAGND 35
                   4567777777777776665 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.16
                    XX.XXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXX CS
  Coatomer_WDAD 125 egsvsfYDweqgklvrridvk..kvknVvwsddgelva 160
                    + +v+++D+ +g+++r+   +   v+ V  +++ +++a
     EPX74362.1  77 DRFVHVWDVSTGQVIRKFGSHlaRVNTVCYNQESSILA 114
                    67899************975542699999998887776 PP

  == domain 3  score: 6.2 bits;  conditional E-value: 0.0022
                    XXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Coatomer_WDAD 104 sikleyqvdkifgGalLgvksegsvsfYDweqgklvrridvkkvknVvwsddgelvalv 162
                      +++ + dki++G     +++g +  YD+ +gkl+     ++++ ++ s++g ++ + 
     EPX74362.1 145 VSTIDIKEDKIIAG-----STDGNIRTYDIRNGKLLTDSFTNPITSIWTSKTGAFALIS 198
                    33333334666555.....56777***************************99887765 PP

  == domain 4  score: 0.7 bits;  conditional E-value: 0.1
                    XXXXXXX.XXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXX.XXXXXXXXXX CS
  Coatomer_WDAD 120 LgvksegsvsfYDweqgklvrridvkk...vknVvwsddgelvalv.skdtvyilsy 172
                    +  +++g + ++D+e+g+++ +i+  +   v+++v  ++ + +a + +  +v +++y
     EPX74362.1 240 ISGSEDGKILVWDMESGEQLTSISTPNmsiVSDIVSHPSSDSFAATtTHGDVLVYQY 296
                    55567778999***********99764345899999888666666514556666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (299 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       406  (0.0226449); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.58u 0.28s 00:00:00.86 Elapsed: 00:00:00.47
# Mc/sec: 1912.43
//
Query:       EPX74363.1  [L=837]
Description: U3 snoRNP-associated protein Utp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.9e-41  138.3  21.8    2.4e-09   37.7   0.1   11.3 12  WD40         WD domain, G-beta repeat
    1.5e-27   95.7   0.0     0.0069   16.7   0.0    9.2  9  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    5.8e-23   81.3   0.2    9.9e-23   80.5   0.2    1.4  1  Utp12        Dip2/Utp12 Family
    3.9e-08   32.6   1.1       0.31   10.0   0.0    6.5  8  Ge1_WD40     WD40 region of Ge1, enhancer of mRNA-decapping p
    9.1e-05   21.9   0.6       0.43    9.9   0.0    4.3  4  Nbas_N       Neuroblastoma-amplified sequence, N terminal
    0.00029   19.7   4.4       0.41    9.2   0.0    4.2  5  Nup160       Nucleoporin Nup120/160
  ------ inclusion threshold ------
      0.066   12.5   0.1        5.2    6.2   0.0    2.8  3  RAB3GAP2_N   Rab3 GTPase-activating protein regulatory subuni


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.23     6e+02      11      34 ..      56      79 ..      44      83 .. 0.81
   2 ?    0.5   0.0      0.51   1.3e+03      11      37 ..      97     122 ..      87     123 .. 0.74
   3 !   21.1   0.6   1.6e-07    0.0004       5      36 ..     140     172 ..     137     174 .. 0.92
   4 !    9.8   0.1    0.0006       1.5       7      37 ..     186     217 ..     182     218 .. 0.85
   5 ?   -1.1   0.0       1.7   4.3e+03      15      31 ..     259     275 ..     251     281 .. 0.79
   6 ?   -2.2   0.0       3.5   9.1e+03      15      37 ..     301     324 ..     292     325 .. 0.69
   7 !   21.0   0.1   1.8e-07   0.00045       8      38 .]     336     367 ..     329     367 .. 0.88
   8 !   24.0   0.4     2e-08   5.1e-05       3      38 .]     373     409 ..     371     409 .. 0.95
   9 !    9.3   0.0   0.00084       2.1       3      31 ..     415     445 ..     413     453 .. 0.81
  10 !   37.7   0.1   9.3e-13   2.4e-09       2      38 .]     458     495 ..     457     495 .. 0.93
  11 !   10.5   0.0   0.00036      0.93      11      38 .]     510     537 ..     503     537 .. 0.91
  12 ?    5.5   0.0     0.013        34      13      38 .]     574     599 ..     565     599 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.23
                SSEEEEEEETTSSEEEEEETTSEE CS
        WD40 11 ssvtslafspdgawlasGsdDgtv 34
                ++++ +a sp  ++l+s ++Dg +
  EPX74363.1 56 KNISRIALSPQATLLLSVDEDGRC 79
                559999**********99999987 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.51
                 SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  11 ssvtslafspdgawlasGsdDgtvriW 37 
                 s+v ++ f p+g+++a +   + + +W
  EPX74363.1  97 SPVGAIEFAPHGRYFAVAL-GKLIQVW 122
                 459999********98765.7777776 PP

  == domain 3  score: 21.1 bits;  conditional E-value: 1.6e-07
                 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS
        WD40   5 rtltGH.ssvtslafspdgawlasGsdDgtvri 36 
                 r++tGH ++v s+++s d+++++s s+D tvri
  EPX74363.1 140 REYTGHfDDVVSISWSADSRFFLSTSKDLTVRI 172
                 689***88899*********************9 PP

  == domain 4  score: 9.8 bits;  conditional E-value: 0.0006
                 EESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   7 ltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 ltGH s v s  fs+d++ + s s+Dg +  W
  EPX74363.1 186 LTGHkSTVVSAFFSQDQQTIYSVSKDGALFSW 217
                 79**65577777*********99****99988 PP

  == domain 5  score: -1.1 bits;  conditional E-value: 1.7
                 EEEEETTSSEEEEE.ETT CS
        WD40  15 slafspdgawlasG.sdD 31 
                 s af+p  ++l+ G s +
  EPX74363.1 259 STAFHPTTNLLVVGfS-N 275
                 5689*******99944.5 PP

  == domain 6  score: -2.2 bits;  conditional E-value: 3.5
                 EEEEETTSSEEEEE.ETTSEEEEE CS
        WD40  15 slafspdgawlasG.sdDgtvriW 37 
                  l  +  g w+a G s+ g + iW
  EPX74363.1 301 TLTINNTGEWIALGsSKLGQLLIW 324
                 566788899997442677777787 PP

  == domain 7  score: 21.0 bits;  conditional E-value: 1.8e-07
                 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 + H +s + l + pdg+ ++sG dDg++++Wd
  EPX74363.1 336 SSHyDSLSTLVYTPDGQRVVSGADDGKIKLWD 367
                 47888899999********************9 PP

  == domain 8  score: 24.0 bits;  conditional E-value: 2e-08
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 c+ t+t H ss+t+l+f + g+ l+s++ Dg+vr Wd
  EPX74363.1 373 CVVTFTQHaSSITGLCFAKRGNVLFSSCLDGSVRAWD 409
                 899*****999**************9999*******9 PP

  == domain 9  score: 9.3 bits;  conditional E-value: 0.00084
                 EEEEEESSSSE..EEEEEETTSSEEEEEETT CS
        WD40   3 clrtltGHssv..tslafspdgawlasGsdD 31 
                 + rt+t+ + v  +++a++p+g  +++Gs D
  EPX74363.1 415 NFRTFTAPNRVqfSCVAVDPSGEIVCAGSQD 445
                 67888888888778**************955 PP

  == domain 10  score: 37.7 bits;  conditional E-value: 9.3e-13
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 q+l  l GH ++v+sl+f+++g++lasGs+D+tvriWd
  EPX74363.1 458 QLLERLAGHeGPVSSLSFNSSGSLLASGSWDKTVRIWD 495
                 6777789**999*************************9 PP

  == domain 11  score: 10.5 bits;  conditional E-value: 0.00036
                 SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  11 ssvtslafspdgawlasGsdDgtvriWd 38 
                 s+v +l+f pdg+ l+ +s Dg + +Wd
  EPX74363.1 510 SDVLALSFRPDGKELSVASLDGQLSFWD 537
                 5799***********99999*******9 PP

  == domain 12  score: 5.5 bits;  conditional E-value: 0.013
                 EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  13 vtslafspdgawlasGsdDgtvriWd 38 
                  ts+++s dg+ +++++  + v ++d
  EPX74363.1 574 FTSICYSADGSCVLTAGTSKYVCLYD 599
                 69**********99887799999998 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.0   4.1e-05       0.1      17      88 ..      35     103 ..      30     115 .. 0.90
   2 ?    5.1   0.0     0.011        29      39      68 ..     147     176 ..     128     207 .. 0.89
   3 !    7.1   0.0    0.0025       6.4      37      87 ..     253     302 ..     237     307 .. 0.80
   4 !   16.7   0.0   2.7e-06    0.0069      33      81 ..     334     382 ..     302     385 .. 0.79
   5 !   11.4   0.0   0.00011      0.29      35      81 ..     378     424 ..     374     432 .. 0.81
   6 ?    1.0   0.0       0.2   5.2e+02      39      77 ..     425     464 ..     408     468 .. 0.82
   7 !   11.1   0.0   0.00015      0.38      36      69 ..     465     498 ..     452     508 .. 0.87
   8 !   12.5   0.0   5.5e-05      0.14      39      74 ..     510     545 ..     502     554 .. 0.88
   9 !    8.5   0.0   0.00097       2.5      33      82 ..     566     615 ..     556     626 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 4.1e-05
  ANAPC4_WD40  17 gellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclg 88 
                  +++ v+ l+ ++ +tl   +++++++ +a +p+ +lL  + +dg++ l++     v+h ++ ks   v  ++
   EPX74363.1  35 NRITVYNLKENKSFTL-PFENKKNISRIALSPQATLLLSVDEDGRCILCNFVRRSVLHYFNFKSP--VGAIE 103
                  5788899999999999.789999*************************************99987..65555 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.011
  ANAPC4_WD40  39 sevrsLaWkpdgklLavaysdgevrlldae 68 
                    v s++W+ d +++    +d +vr++++ 
   EPX74363.1 147 DDVVSISWSADSRFFLSTSKDLTVRIHSVD 176
                  5799**********************9986 PP

  == domain 3  score: 7.1 bits;  conditional E-value: 0.0025
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtcl 87 
                  ++ + rs a++p  +lL+v++s+g   +++    +++ +ls+++++ + +l
   EPX74363.1 253 QNANLRSTAFHPTTNLLVVGFSNGLFGIYELPLFTMLYQLSITQSN-IDTL 302
                  67788999*********************99999999999998874.6655 PP

  == domain 4  score: 16.7 bits;  conditional E-value: 2.7e-06
  ANAPC4_WD40  33 eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  +++++  + + L + pdg+  + + +dg+++l d+ sg +v +++ +++
   EPX74363.1 334 KQSSHYDSLSTLVYTPDGQRVVSGADDGKIKLWDITSGFCVVTFTQHAS 382
                  56788888999*********************************99877 PP

  == domain 5  score: 11.4 bits;  conditional E-value: 0.00011
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  +++ s++++L++ + g++L  ++ dg+vr  d    +  +++++ + 
   EPX74363.1 378 TQHASSITGLCFAKRGNVLFSSCLDGSVRAWDLVRYRNFRTFTAPNR 424
                  567899***********************999887777777766655 PP

  == domain 6  score: 1.0 bits;  conditional E-value: 0.2
  ANAPC4_WD40  39 sevrsLaWkpdgklLavaysdg.evrlldaesgkvvhsls 77 
                   + +++a  p+g++ + + +d+ e+ + ++++g++++ l 
   EPX74363.1 425 VQFSCVAVDPSGEIVCAGSQDSfEIFMWSVQTGQLLERLA 464
                  4556788899***********999**********998775 PP

  == domain 7  score: 11.1 bits;  conditional E-value: 0.00015
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaes 69 
                  ++++ v+sL+++ +g+lLa +  d +vr+ d+ s
   EPX74363.1 465 GHEGPVSSLSFNSSGSLLASGSWDKTVRIWDIFS 498
                  67889************************99865 PP

  == domain 8  score: 12.5 bits;  conditional E-value: 5.5e-05
  ANAPC4_WD40  39 sevrsLaWkpdgklLavaysdgevrlldaesgkvvh 74 
                  s v +L+++pdgk L va  dg++++ d++++k  +
   EPX74363.1 510 SDVLALSFRPDGKELSVASLDGQLSFWDVQEAKQTS 545
                  57899*************************999766 PP

  == domain 9  score: 8.5 bits;  conditional E-value: 0.00097
  ANAPC4_WD40  33 eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksek 82 
                  e+++ +++ +s++++ dg+    a     v l+d+ +g ++++++ ++++
   EPX74363.1 566 ENASGNKTFTSICYSADGSCVLTAGTSKYVCLYDIATGVLIKKFQLSKNE 615
                  5667788899**********************************998875 PP

>> Utp12  Dip2/Utp12 Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.5   0.2   3.8e-26   9.9e-23       4     106 ..     725     826 ..     724     827 .. 0.94

  Alignments for each domain:
  == domain 1  score: 80.5 bits;  conditional E-value: 3.8e-26
                 HHHH.HHHSS-TTTHHHHHHCS-CTCHHHHHHHHHHHH.HTTTTHHHHHHHHHHHHHHHHHHHHHSH..HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       Utp12   4 elleevlekippsdirltvlrLpssyvlkLLeflaerlaeksphlelllrwlkallrvHgsylvasps.dlvpaLrslqkslrerlktlskllglnlgr 101
                 e++e+v+e+ip++di+++ ++Lp++y+ +L+++l++ +a ++ph+e++l+w++++l++Hg +++ +++ ++ ++L+slqks+    k ls+l+++n ++
  EPX74363.1 725 EVIERVYESIPVADIDHITQQLPTTYLANLINYLSS-FAAETPHIEFHLKWMRSILSHHGEFIK-RRNfEYASQLTSLQKSIVVLSKRLSQLSSNNEFS 821
                 689*********************************.669****************99997775.6787999*************************** PP

                 HHHHH CS
       Utp12 102 Ldyll 106
                 L ++l
  EPX74363.1 822 LSFIL 826
                 *9997 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       1.7   4.4e+03     176     209 ..      44      77 ..      39      80 .. 0.82
   2 ?    1.6   0.0     0.042   1.1e+02     186     211 ..     189     214 ..     168     240 .. 0.88
   3 !    3.8   0.0    0.0089        23     177     216 ..     328     368 ..     311     372 .. 0.81
   4 !    5.1   0.0    0.0036       9.3     181     216 ..     374     410 ..     369     418 .. 0.86
   5 ?    0.9   0.0      0.07   1.8e+02     189     218 ..     469     498 ..     453     504 .. 0.85
   6 !   10.0   0.0   0.00012      0.31     189     220 ..     511     542 ..     499     547 .. 0.84
   7 ?   -2.4   0.1      0.71   1.8e+03     189     216 ..     573     600 ..     560     603 .. 0.83
   8 ?    1.3   0.0     0.051   1.3e+02     190     214 ..     674     698 ..     658     704 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 1.7
    Ge1_WD40 176 eieegllkieehsliveaafspdGtalatasedG 209
                 e+++ +l +e++ +i+  a+sp  t l    edG
  EPX74363.1  44 ENKSFTLPFENKKNISRIALSPQATLLLSVDEDG 77 
                 556667888999999999*****99999888888 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.042
    Ge1_WD40 186 ehsliveaafspdGtalatasedGev 211
                 ++s++v+a fs d  ++   s+dG +
  EPX74363.1 189 HKSTVVSAFFSQDQQTIYSVSKDGAL 214
                 4589********************86 PP

  == domain 3  score: 3.8 bits;  conditional E-value: 0.0089
    Ge1_WD40 177 ieegllkieehs.liveaafspdGtalatasedGevkffqv 216
                  e+ +lk ++h   +++ +++pdG  +   + dG++k++ +
  EPX74363.1 328 SESYVLKQSSHYdSLSTLVYTPDGQRVVSGADDGKIKLWDI 368
                 4555666667754899999********************98 PP

  == domain 4  score: 5.1 bits;  conditional E-value: 0.0036
    Ge1_WD40 181 llkieehs.liveaafspdGtalatasedGevkffqv 216
                 ++ +++h+  i+   f+  G +l  ++ dG v+ + +
  EPX74363.1 374 VVTFTQHAsSITGLCFAKRGNVLFSSCLDGSVRAWDL 410
                 5677888559***********************9976 PP

  == domain 5  score: 0.9 bits;  conditional E-value: 0.07
    Ge1_WD40 189 liveaafspdGtalatasedGevkffqvyl 218
                  +++ +f + G  la  s d +v+ + ++ 
  EPX74363.1 469 PVSSLSFNSSGSLLASGSWDKTVRIWDIFS 498
                 57778999*******************996 PP

  == domain 6  score: 10.0 bits;  conditional E-value: 0.00012
    Ge1_WD40 189 liveaafspdGtalatasedGevkffqvyled 220
                  +   +f pdG  l++as dG++ f+ v   +
  EPX74363.1 511 DVLALSFRPDGKELSVASLDGQLSFWDVQEAK 542
                 5677799********************97665 PP

  == domain 7  score: -2.4 bits;  conditional E-value: 0.71
    Ge1_WD40 189 liveaafspdGtalatasedGevkffqv 216
                 + ++  +s+dG  + ta +  +v ++ +
  EPX74363.1 573 TFTSICYSADGSCVLTAGTSKYVCLYDI 600
                 5677789**********99999999987 PP

  == domain 8  score: 1.3 bits;  conditional E-value: 0.051
    Ge1_WD40 190 iveaafspdGtalatasedGevkff 214
                   e  fsp G a a+a+++G++ f 
  EPX74363.1 674 CQEVQFSPSGGAFAAATTEGLMIFS 698
                 56789***************99885 PP

>> Nbas_N  Neuroblastoma-amplified sequence, N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0      0.03        78     208     253 ..      34      79 ..      26      87 .. 0.85
   2 ?    3.0   0.0     0.021        54     219     260 ..     329     370 ..     248     383 .. 0.70
   3 ?    0.2   0.0      0.15   3.9e+02     217     260 ..     455     498 ..     432     504 .. 0.82
   4 !    9.9   0.0   0.00017      0.43     232     265 ..     512     545 ..     506     552 .. 0.90

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.03
      Nbas_N 208 akkrgllkllslklysrkaeekdgvfkmslspdgtllavihfsgkl 253
                  ++ ++++l + k ++ + e+k  + +++lsp+ tll  +   g+ 
  EPX74363.1  34 GNRITVYNLKENKSFTLPFENKKNISRIALSPQATLLLSVDEDGRC 79 
                 5677889999999999999******************999888775 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.021
      Nbas_N 219 lklysrkaeekdgvfkmslspdgtllavihfsgklsiwdips 260
                   +  ++++  d +  +  +pdg ++      gk+ +wdi s
  EPX74363.1 329 ESYVLKQSSHYDSLSTLVYTPDGQRVVSGADDGKIKLWDITS 370
                 345557788889999999999999999999999999999987 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.15
      Nbas_N 217 lslklysrkaeekdgvfkmslspdgtllavihfsgklsiwdips 260
                 ++ +l  r a  +  v  +s+   g+lla   +   + iwdi s
  EPX74363.1 455 QTGQLLERLAGHEGPVSSLSFNSSGSLLASGSWDKTVRIWDIFS 498
                 4456788888999999999*********************9976 PP

  == domain 4  score: 9.9 bits;  conditional E-value: 0.00017
      Nbas_N 232 vfkmslspdgtllavihfsgklsiwdipslkqrg 265
                 v+ +s+ pdg  l+v  + g+ls wd+   kq +
  EPX74363.1 512 VLALSFRPDGKELSVASLDGQLSFWDVQEAKQTS 545
                 7889***********************9999875 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.15   3.8e+02     221     248 ..     193     220 ..     151     252 .. 0.60
   2 ?    0.0   0.0       0.1   2.6e+02     239     256 ..     360     377 ..     342     385 .. 0.87
   3 !    6.8   0.0   0.00088       2.3     229     259 ..     392     422 ..     374     438 .. 0.81
   4 ?   -1.5   0.0      0.28   7.1e+02     233     250 ..     482     499 ..     474     503 .. 0.81
   5 !    9.2   0.0   0.00016      0.41     234     330 ..     525     630 ..     512     647 .. 0.74

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.15
                 EET.........TTTEEEEEETT-EEEEEETT CS
      Nup160 221 vavavvei....gqtylfalsrdgkLrvWnll 248
                 v++    +    +q++++++s dg L  W ++
  EPX74363.1 193 VVS----AffsqDQQTIYSVSKDGALFSWKYS 220
                 222....1333499999999999998777655 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.1
                 T-EEEEEETTTTEEEEEE CS
      Nup160 239 dgkLrvWnlltgkclati 256
                 dgk+++W++++g c+ t+
  EPX74363.1 360 DGKIKLWDITSGFCVVTF 377
                 9*************9885 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.00088
                 TTTEEEEEETT-EEEEEETTTTEEEEEEE-- CS
      Nup160 229 gqtylfalsrdgkLrvWnlltgkclatidll 259
                   ++lf+ ++dg +r+W+l  ++  +t++ +
  EPX74363.1 392 RGNVLFSSCLDGSVRAWDLVRYRNFRTFTAP 422
                 5699***************999988887666 PP

  == domain 4  score: -1.5 bits;  conditional E-value: 0.28
                 EEEEETT-EEEEEETTTT CS
      Nup160 233 lfalsrdgkLrvWnlltg 250
                 l++ s d+++r+W++ + 
  EPX74363.1 482 LASGSWDKTVRIWDIFSR 499
                 666688********9876 PP

  == domain 5  score: 9.2 bits;  conditional E-value: 0.00016
                 EEEETT-EEEEEETTTTEEEEEEE--.-SSSTTS--SSEESEEESSSSEEEE.....................E--GGG-EEEEEEEEEEE-...SSSE CS
      Nup160 234 falsrdgkLrvWnlltgkclatidllrdeeaqdessskstldpaesslirvs...........dggqsylvvtyspssggefkvwkvkkedtsvslglv 321
                  ++s+dg L  W+++ +k+++ id  +d+    +s+ + t + a+ + +  s             g s +v++y   +g  +k ++ +k+ +   +g++
  EPX74363.1 525 SVASLDGQLSFWDVQEAKQTSLIDGRKDLSGGRKSTDAQTAENASGNKTFTSicysadgscvlTAGTSKYVCLYDIATGVLIKKFQLSKNES-L-QGVL 621
                 5789********************99555555555555555554444443333346899999988888899999888999999999888866.3.5666 PP

                 EEEES-S-- CS
      Nup160 322 dlfleqtiv 330
                 +++ + +++
  EPX74363.1 622 EVLNSRNMT 630
                 666665544 PP

>> RAB3GAP2_N  Rab3 GTPase-activating protein regulatory subunit N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0     0.002       5.2     306     343 ..      54      91 ..      47      94 .. 0.89
   2 ?    2.6   0.0     0.025        65      68     111 ..     258     302 ..     244     318 .. 0.74
   3 ?   -3.5   0.0       1.8   4.7e+03       7      27 ..     577     597 ..     574     610 .. 0.65

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.002
  RAB3GAP2_N 306 skRegesivlsPsgrlaavtDsLgRVlLlDvqagvvvR 343
                  k ++ +i+lsP+ +l+   D+ gR +L +  ++ v+ 
  EPX74363.1  54 NKKNISRIALSPQATLLLSVDEDGRCILCNFVRRSVLH 91 
                 578999************************99998875 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.025
  RAB3GAP2_N  68 kssqgspdwtviavGlssGylrfytengelLlsql.lheepvlki 111
                 +s+  +p  ++++vG+s+G + +y+     +l ql + ++++ ++
  EPX74363.1 258 RSTAFHPTTNLLVVGFSNGLFGIYELPLFTMLYQLsITQSNIDTL 302
                 4444589999**************987655555541455666555 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 1.8
  RAB3GAP2_N   7 islspdgellvlakeqkavvl 27 
                 i++s+dg++++ a+ +k+v+l
  EPX74363.1 577 ICYSADGSCVLTAGTSKYVCL 597
                 666666666666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (837 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       543  (0.0302861); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.75u 0.32s 00:00:01.07 Elapsed: 00:00:00.48
# Mc/sec: 5281.19
//
Query:       EPX74364.1  [L=530]
Description: D-lactate dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.4e-68  231.2   0.0    1.8e-68  230.9   0.0    1.1  1  FAD-oxidase_C  FAD linked oxidases, C-terminal domain
    1.4e-32  112.3   0.1    2.3e-32  111.6   0.1    1.3  1  FAD_binding_4  FAD binding domain


Domain annotation for each model (and alignments):
>> FAD-oxidase_C  FAD linked oxidases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  230.9   0.0     2e-72   1.8e-68       2     249 ..     277     528 ..     276     529 .. 0.99

  Alignments for each domain:
  == domain 1  score: 230.9 bits;  conditional E-value: 2e-72
                    -SEEEEEEEEESSHHHHHHHHHHHHHH.T---SEEEEE-HHHHHHHHHTS-SSTTS-TTT-EEEEEEEEE-HHHHHHHHHHHHHHHTTT-EEEEE. CS
  FAD-oxidase_C   2 pearavalvafpsfeaavkavreiaqa.giipaalelmdkkaldlveatkgakkglpdeeealllvefegddeeeaeeelealveaileatgaadv 96 
                    p++++va++++ps+e+++ka++e +++  +i++a+elmd+++ +lv a++ ++++++de+++++l+e++g++++++e++l+al+e++ e+++++d+
     EPX74364.1 277 PRSTNVAFFGVPSYENVLKAFSESKSHlTEILSAFELMDNTSQRLVDAHSSTQRPVEDEHPFYVLLETQGSNKDHDEQKLNALIENLIENEIITDG 372
                    999********************************************************************************************* PP

                    .........ETGGGGGGGGHHHHHHHHHCTTEEEEEEEEEEEHHHHHHHHHHHHHHHHHHH..........EEEEEEEEEETTEEEEEEEEEEE.. CS
  FAD-oxidase_C  97 lvaqdeaeaealwkaRkaalpylrdallkagvavlseDtsvPvsrladlvrdikalldkyg..........levvlfgHagdgnlhlyilfdlade 182
                    ++aqde + + lw+ R+++ +    +l+kag+ v+++D+s+P+  l+dlv+d+k++l + +          ++vv fgH+gdgnlhl+i+++  d+
     EPX74364.1 373 VIAQDESQLRVLWERREGITE----CLAKAGSGVYKYDVSLPLGVLYDLVNDTKQRLIDLDllgessdhpvIDVVGFGHMGDGNLHLNIAVRNYDK 464
                    *********************....*********************************************************************** PP

                    --TT--THHHHHHHHHHHHTT-----------------------THHHHHHHHHHHH-TT--BSTT- CS
  FAD-oxidase_C 183 aeeeraeklvdevvdlavelgGsisgEHGvGldkkaylerekgeeglalmrriKaalDPkgiLNPgk 249
                      e++++++v e+   +++ +Gsis+EHG Gl kk+y+ ++k++e +alm+++K+++DP+gi+ P+k
     EPX74364.1 465 RVENALQPWVFEW---VASQRGSISAEHGLGLLKKPYVGYSKTPEMIALMKNLKNVFDPNGIMLPYK 528
                    *************...*************************************************99 PP

>> FAD_binding_4  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.6   0.1   2.6e-36   2.3e-32       2     136 ..     102     237 ..     101     239 .. 0.98

  Alignments for each domain:
  == domain 1  score: 111.6 bits;  conditional E-value: 2.6e-36
                    EEEEEESSHHHHHHHHHHHHHCTSCEEEESSSTTEESTTC.SCCEEEEEETTS--EEEEETTTTEEEEETTSBHHHHHHHHHHHTTECSSGGGTTC CS
  FAD_binding_4   2 aavvrpeseeevaaalrlaneaglpvlvrGgGssllgqav.atggvvldlsrlnrileideeegtatveaGvtlgdlvealaakglllglepgsgi 96 
                    ++v++p+++++v+ +l+++n+++l v+++Gg ++l+g+++  ++ vvl+l  +n+i+++de +g++ + aGv+l++++ +la+k  +++l+ g+  
     EPX74364.1 102 ELVIKPKTTQQVSQILKYCNSRKLAVVPQGGNTGLVGGSIpVFDEVVLNLGLMNKIHSFDELSGVLSLDAGVILENADTFLAEKDHMFPLDLGAKG 197
                    589************************************999********88******************************************** PP

                    GSBHHHTTTTT-EETTEEGG--HHGTEEEEEEEETTSEEE CS
  FAD_binding_4  97 pgtvGGaiatnagGygsekyGlirdnvlglevvladGevv 136
                    ++ vGG  at agG +  +yG++r ++lg e+vl+dG+v+
     EPX74364.1 198 SCQVGGCAATAAGGLRLLRYGSLRGTILGIEAVLPDGTVL 237
                    **************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (530 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       581  (0.0324056); expected 358.6 (0.02)
Passed bias filter:                      564  (0.0314574); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.30s 00:00:00.88 Elapsed: 00:00:00.45
# Mc/sec: 3560.21
//
Query:       EPX74365.1  [L=1122]
Description: ubiquitin carboxy terminal hydrolase Ubp21 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.8e-70  236.3   0.7    3.5e-66  223.0   0.1    3.3  3  USP7_ICP0_bdg  ICP0-binding domain of Ubiquitin-specific prot
    7.9e-59  198.8   3.1    7.5e-57  192.4   0.3    2.7  3  USP7_C2        Ubiquitin-specific protease C-terminal
    2.8e-49  167.9   0.6    5.7e-49  166.9   0.6    1.6  1  UCH            Ubiquitin carboxyl-terminal hydrolase
      1e-23   84.5   0.0    2.7e-23   83.0   0.0    1.7  1  UCH_1          Ubiquitin carboxyl-terminal hydrolase
    6.6e-06   26.3   0.0     0.0001   22.5   0.0    2.9  1  MATH           MATH domain
  ------ inclusion threshold ------
      0.051   12.7   0.2        0.1   11.7   0.2    1.4  1  NSP16          Coronavirus NSP16
        5.3    7.4   6.3       0.41   11.0   0.1    2.4  4  FliC           Flagellin protein


Domain annotation for each model (and alignments):
>> USP7_ICP0_bdg  ICP0-binding domain of Ubiquitin-specific protease 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  223.0   0.1   1.4e-69   3.5e-66       1     238 [.     650     891 ..     650     893 .. 0.95
   2 !    7.4   0.0   0.00097       2.5      82     130 ..     939     989 ..     898     991 .. 0.89
   3 ?    2.1   0.0     0.039     1e+02      43     106 ..     996    1061 ..     990    1069 .. 0.79

  Alignments for each domain:
  == domain 1  score: 223.0 bits;  conditional E-value: 1.4e-69
  USP7_ICP0_bdg   1 vRlWvmvnrqnkTvRpdqpledeeesktveelreklaskqaelrlylEvlede...lppvkkeddillFlKlfdpekqtLsyvghvyvskeskvsd 93 
                    +RlW+m+nrqn+TvR+d +  ++     v+++ +++ +k+a+lr+y+E+++d+   +++v +e++ ++FlK+fd++kq++s+v +v+v+++s +sd
     EPX74365.1 650 IRLWMMTNRQNRTVRVDLLFDKKGL--LVDQICDTHIRKDADLRIYAEYVDDKqelSHEVVDETSAFIFLKYFDYQKQSISGVFSVHVERDSPISD 743
                    7*******************99888..9******999999***********52467778999********************************** PP

  USP7_ICP0_bdg  94 lvpeineraglpsdtelllyEEikpnmieilklkqtlkkaelqdGdIicfqkelse.e.ekdelpdakeyydfllnrveVtFkpkekpk.deeftl 186
                    l +++++ +++p++t ++ yEEik +m++il++++++ k+e+qdGdIicf+k++++ e +++++++a + ydfl++r +VtF+p++ ++ d +f+l
     EPX74365.1 744 LSDIVCKSMHWPEGTAITYYEEIKTGMVDILDTNSSFLKSEIQDGDIICFEKNDKSpEvPHQQFSSALDLYDFLAHRLTVTFEPRNGEEsDGTFDL 839
                    ***************************************************9999976899************************6555599**** PP

  USP7_ICP0_bdg 187 eLskkmtYdqlaekvaekLkvdptklrfttvnaasgkpkapikrsnqetlkd 238
                    eL++++tY+++a++v++ L++d+ +l+ft ++  s +p+++i++ ++ tl++
     EPX74365.1 840 ELTTHTTYNEMAQAVGKVLNTDAGYLQFTLAHLPSRTPRTVIRNPSKFTLQN 891
                    *******************************99***********88889986 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.00097
  USP7_ICP0_bdg  82 hvyvskeskvsdlvpeineragl..psdtelllyEEikpnmieilklkqtl 130
                     +yv+k+ +v+d+++++  +agl  ++ ++l+lyE +++ + + ++l+++l
     EPX74365.1 939 DFYVNKDGSVKDILQQVAVKAGLgnEKVEDLRLYEVYNHRILKAHNLSDSL 989
                    589********************878889********99999988887765 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.039
  USP7_ICP0_bdg   43 lrlylEvled.elppvkkeddillFlKlfdpekqtLsyvghvy.vskeskvsdlvpeineraglps 106 
                      ++y+E +++ e  + ++++ i +++ +f  +  +L+++   + + +++ + ++ + +++r+g++ 
     EPX74365.1  996 ATIYVEATSKeEELELSEQNGISIIVQHFSRDLSRLHGIPFYFtLLPDEDLGSMKKRLQKRLGFKD 1061
                     579***9994345578999*******************9755415578889999999999998854 PP

>> USP7_C2  Ubiquitin-specific protease C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.2   0.2     0.003       7.6      32      78 ..     619     662 ..     609     744 .. 0.63
   2 ?   -2.7   0.0       1.6   4.1e+03      34      79 ..     730     773 ..     703     786 .. 0.76
   3 !  192.4   0.3   2.9e-60   7.5e-57       2     204 ..     905    1108 ..     904    1110 .. 0.97

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.003
     USP7_C2  32 eeelellvpkngtvkdlleelqkkvklseeeskklrllevsnhkiqk 78 
                 ++ l+ +v++n+t+ dl +++++ +   +++s+ +rl+ + n + ++
  EPX74365.1 619 HNLLTTRVKRNATILDLYNHVASIL---KRDSTSIRLWMMTNRQNRT 662
                 34578899**********9999877...5677888888875544332 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1.6
     USP7_C2  34 elellvpkngtvkdlleelqkkvklseeeskklrllevsnhkiqkv 79 
                  +++ v++++ ++dl + + k ++ +e   + +  +e  ++ ++++
  EPX74365.1 730 VFSVHVERDSPISDLSDIVCKSMHWPEG--TAITYYEEIKTGMVDI 773
                 4789999999999999999998888765..5666666555555555 PP

  == domain 3  score: 192.4 bits;  conditional E-value: 2.9e-60
     USP7_C2    2 lyYevLsislkElEnkksikvtwlseklkkeeelellvpkngtvkdlleelqkkvklseeeskklrllevsnhkiqkvlkedealeslndsttlrae 98  
                  ++Yev+++sl+ElE+k+ i+ +++s++++k ++++++v+k+g+vkd+l++++ k++l +e+ + lrl+ev+nh+i k ++ +++l +l+++ t+++e
  EPX74365.1  905 MFYEVMDLSLSELEHKQLIQAYFISDGITKTNKYDFYVNKDGSVKDILQQVAVKAGLGNEKVEDLRLYEVYNHRILKAHNLSDSLFDLTEFATIYVE 1001
                  79*********************************************************************************************** PP

     USP7_C2   99 eip.edeleleede.kliqvfhFskepskthGiPFlfklkegEtfsetkeRlqkrlgvkdkeFekiKfalvtrsky.kpeyledddlvlldllsked 192 
                      e+elel+e++   i v+hFs+++s+ hGiPF+f+l ++E ++++k+Rlqkrlg+kd +F+kiK+a+++ ++  kp yl+dd+ vl+ ++  e+
  EPX74365.1 1002 ATSkEEELELSEQNgISIIVQHFSRDLSRLHGIPFYFTLLPDEDLGSMKKRLQKRLGFKDAQFAKIKLAVLQAQSLgKPYYLSDDSEVLYGEFDPES 1098
                  ***9******998899***********************************************************88*******98899*8888666 PP

     USP7_C2  193 dldlLgLdHpdk 204 
                  +  +LgLdHp  
  EPX74365.1 1099 H--ILGLDHPAP 1108
                  6..******976 PP

>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.9   0.6   2.2e-52   5.7e-49       1     257 []     230     542 ..     230     542 .. 0.90

  Alignments for each domain:
  == domain 1  score: 166.9 bits;  conditional E-value: 2.2e-52
                 -EES-SSSTHHHHHHHHHHHTSHHHHHHHHTCHHCCSSTCCCCC-.TT.TTS.TTHHHHHHHHHHHHHHSH-CCEE--HHHHHHHHHHSGGGTSSSTCE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH   1 tGlsNlGntCymnsvlQcLfsipelrdyllsleevkkesrnkkelnesnplgkkgelakalkdlfkellkskskavsPkklkktlsklaksfsgykqqD 99 
                 +Gl+N G+tCymns+lQ+L+ ++ +r+ ++++ + +++               kg +a+al+++f++l  ++++avs+++l++++++   sf +++q+D
  EPX74365.1 230 VGLNNQGATCYMNSLLQSLYFTNVFRKTVYKIPTDSDDA--------------KGSVAYALQRVFYNLE-KQREAVSTNELTRSFGWN--SFDSFMQHD 311
                 69************************9999953333333..............345*************.58*************996..567****** PP

                 HHHHHHHHHHHHHHHHCCHCCCHHHHHHCCCTTSHHHHHH-EEEEE..................................................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..................................................... RF
         UCH 100 aqEflaflLdqlhedlnrevaeekwkkhlkrndslitdlfegqlks..................................................... 145
                 +qEf ++l d+l+++++            +  ++  +d+f g++ks                                                     
  EPX74365.1 312 VQEFNRVLQDNLEKKMKG-----------TDVENALNDIFVGKMKSyvkcidvnyessrvedfwdiqlnvkgmatledsfrdaiqvetltgdnkyyaeg 399
                 ******************...........889999**************************************************************** PP

                 ........EEEEEEB-SEEEEEEESEEETEE...EEE--SEEB--SEEE-GGGBSS-BTTS-TCS-BEEEEEEEEEESCTTSEEEEEEEECTTTTEEEE CS
                 ........xxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH 146 ........klklkrlPeiLiihlkRfsynss...ksKlntkvefpeeldlssylaeekkkkteekkkYeLiavvvHsGslssGHYvayiknekngkWyk 233
                          + ++++P++L+++lkRf y+       K+n++ efp+e+dl++yl++ ++k+  e+  Y L++v+vH G l++GHY+a+ik ek++ W+k
  EPX74365.1 400 hglqdahkGVVFESFPNVLQLQLKRFDYDMLrdmMVKINDRHEFPLEIDLEPYLSDTADKS--ESHVYCLHGVLVHGGDLHGGHYYALIKPEKDSGWFK 496
                 ********9*******************7767789*******************9666665..6678***********************999999*** PP

                 EETTEEEEE-HHCCCTT.......................CEEEEEE CS
                 xxxxxxxxxxxxxxxxx.......................xxxxxxx RF
         UCH 234 ydDetvkevkeeeevls.......................sayiLfY 257
                 +dD++v++ + + ev+                        +ay+L+Y
  EPX74365.1 497 FDDDRVTRATLK-EVQDdnfggeslnkpkgytgnpfkrfmNAYMLVY 542
                 *********987.4444445555555566666667777999999999 PP

>> UCH_1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.0   0.0   1.1e-26   2.7e-23       1     318 [.     230     500 ..     230     502 .. 0.81

  Alignments for each domain:
  == domain 1  score: 83.0 bits;  conditional E-value: 1.1e-26
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1   1 sGLEnhivnsYlNslLQvlyfipplrnlalshlakeckkehcLlcElgflfdmldkakglncqasnFlralssipeasalglileeeeetekssaisls 99 
                 +GL n+ +++Y+NslLQ lyf+  +r+++ +  +++++ + ++++ l+ +f+ l+k++ + + +++++r+++    ++++  + ++  +          
  EPX74365.1 230 VGLNNQGATCYMNSLLQSLYFTNVFRKTVYKIPTDSDDAKGSVAYALQRVFYNLEKQR-EAVSTNELTRSFG----WNSFDSFMQH--D---------- 311
                 8*************************888888889999999***************98.7899*********....5556666555..3.......... PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 100 sliqsfnrflldqlekelketkknsseeesaieqllgtkaettirclkCgseksrksstlvldlkyPkpsnekkeakvtfasilksslerekttrawCe 198
                   +q+fnr+l d+lek+ k t       e+a+++++  k+++ ++c++ + e+sr +++  ++l+     +  ++ + +f + ++       ++++   
  EPX74365.1 312 --VQEFNRVLQDNLEKKMKGTD-----VENALNDIFVGKMKSYVKCIDVNYESSRVEDFWDIQLNV----KGMATLEDSFRDAIQVETLT-GDNKYYA- 397
                 ..688************99975.....6999*********************************55....33444555666666555544.4455555. PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 199 kCkryqpteqrktvknlPpvLalnakle.eeeelelwkt.......knwlpleiklsldedknleeklkeerekakaekeikvYeLqsvvvhigdskes 289
                 + +  q  +++ +++++P+vL l++k++  +     +++       ++ +plei+l+          l ++     +++e+ vY L++v vh gd  + 
  EPX74365.1 398 EGHGLQDAHKGVVFESFPNVLQLQLKRFdYDM----LRDmmvkindRHEFPLEIDLE--------PYLSDT----ADKSESHVYCLHGVLVHGGDL-HG 479
                 559999********************985553....333333344359999999992........222333....4478999************55.5* PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 290 ghLvslvkvaekelerdppesqWylFNDf 318
                 gh+++l+k   +     +++s W++F+D 
  EPX74365.1 480 GHYYALIK---P-----EKDSGWFKFDDD 500
                 ********...3.....23589******5 PP

>> MATH  MATH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   3.9e-08    0.0001       1     113 []      58     206 ..      58     206 .. 0.84

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 3.9e-08
        MATH   1 iknfSklkegesryskveerfnipWrlkikrkng........flglyLrcnkeeele....................rkwsieveftlklvssngksvk 71 
                 +k+fSkl   e++ys++++++   Wrl + +k++        fl+   +c+ +  ++                     + s+ ++f l+l + + + v+
  EPX74365.1  58 VKDFSKLI--EKTYSPIFTAGDSAWRLVLFPKGCnqteyasvFLEYLPQCKVDAIKQeekeiaegkevtvdseivtdETYSCCAQFALSLSNVRNPAVM 154
                 699*****..****************************8887666666777665555667789999999999999999*******************55 PP

        MATH  72 kkdt..hkfeke.kgwgwgkfiswdklekky.......lvdDsiiveaevkI 113
                 + +t  h+f +e k+wg+++f  + k+   +       l+dD +++ ++v +
  EPX74365.1 155 QINTshHRFRSEvKDWGFTRFADLRKIGVPNsdfpvpfLEDDQFCISVTVRV 206
                 444448**************99999985444444888899999999999975 PP

>> NSP16  Coronavirus NSP16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.2   4.1e-05       0.1     101     189 ..     666     754 ..     618     762 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 4.1e-05
                 --B-SSSEEEES-GGGEEESS-EEEEEE----TTS-SS-S------THHHHHHHHHHHHEEEEEEEEEEE-SSS--HHHHHHHTTEEEE CS
       NSP16 101 dyvsdadvsvlgdcatlkledkfdllisdlydkrtkeidkenvskdgfftylsgfikeklalGGsiaikitefswnkelyelvqkfafw 189
                 d + d +  ++ +    ++ +  dl i   y + ++e+++e v +   f++l  f  +k ++ G +++ +   s   +l ++v k  +w
  EPX74365.1 666 DLLFDKKGLLVDQICDTHIRKDADLRIYAEYVDDKQELSHEVVDETSAFIFLKYFDYQKQSISGVFSVHVERDSPISDLSDIVCKSMHW 754
                 566677777778888899999**************************************************************999999 PP

>> FliC  Flagellin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       4.4   1.1e+04      10      55 ..     124     173 ..     111     175 .. 0.52
   2 ?   -3.5   0.1         5   1.3e+04      97     118 ..     219     242 ..     217     243 .. 0.69
   3 ?   -3.6   0.2       5.3   1.4e+04      89     109 ..     841     859 ..     833     868 .. 0.57
   4 ?   11.0   0.1   0.00016      0.41      80     110 ..     924     960 ..     879    1005 .. 0.74

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 4.4
        FliC  10 akkatittdsgttytlaga......tagtvdvtgatvsadallsavksaaft 55 
                 +++++i td   ty+  ++      +  +  v +++ s   + s+vk+ +ft
  EPX74365.1 124 TVDSEIVTD--ETYSCCAQfalslsNVRNPAVMQINTSHHRFRSEVKDWGFT 173
                 233333333..33333333445444444466777777777777777776666 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 5
        FliC  97 vtYfvqaD.GsV.tngsGkavYvs 118
                 v+Y+ +++ G V  n++G++ Y++
  EPX74365.1 219 VNYNSKKEtGFVgLNNQGATCYMN 242
                 677777777777346888888876 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 5.3
        FliC  89 LTttasytvtYfvqaDGsVtn 109
                 LTt ++   + ++qa G+V n
  EPX74365.1 841 LTTHTT--YNEMAQAVGKVLN 859
                 444444..2223444477766 PP

  == domain 4  score: 11.0 bits;  conditional E-value: 0.00016
        FliC  80 avYvdadgeLTttasytvtYfvqaDGsVtn.........g 110
                 ++Y  +dg +T+t++   +++v++DGsV++         g
  EPX74365.1 924 QAYFISDG-ITKTNK--YDFYVNKDGSVKDilqqvavkaG 960
                 68887887.******..89*********987766666551 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1122 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       556  (0.0310112); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.75u 0.28s 00:00:01.03 Elapsed: 00:00:00.45
# Mc/sec: 7511.84
//
Query:       EPX74366.1  [L=345]
Description: hypothetical protein SOCG_03576 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    0.00025   21.2   0.4    0.00061   20.0   0.0    1.8  2  Glycophorin_A  Glycophorin A
    0.00043   20.2   0.0    0.00043   20.2   0.0    1.7  2  Mid2           Mid2 like cell wall stress sensor
    0.00057   18.8   0.5     0.0015   17.4   0.0    1.7  2  Amnionless     Amnionless
  ------ inclusion threshold ------
      0.073   13.0   0.8       0.43   10.5   0.0    2.2  2  TMEM154        TMEM154 protein family
       0.08   13.4   0.0       0.21   12.0   0.0    1.7  1  FAM163         FAM163 family
       0.11   12.4   0.1       0.41   10.5   0.0    1.8  2  Tmemb_9        TMEM9
       0.12   12.3   0.2       0.12   12.3   0.2    2.1  3  Syndecan       Syndecan domain


Domain annotation for each model (and alignments):
>> Glycophorin_A  Glycophorin A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   2.4e-07   0.00061      33      89 ..      82     137 ..      52     148 .. 0.78
   2 ?   -3.0   0.1       3.2   8.3e+03       9      21 ..     294     306 ..     276     319 .. 0.63

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 2.4e-07
                    XXXXXXXXXXXX.XXXXSSSSSSS-TTHHHHHHHHHHHHHHHHHHHHHHHHTHSXXX CS
  Glycophorin_A  33 tirtevaaeqeetgereqlvhdFselvitliifgvmAgvigtillisYlirRliKKs 89 
                     + t+va +++++g+ ++  ++ s +vi++ i+gv+ ++i ++l+  Y++r  ++K 
     EPX74366.1  82 VASTTVASANNSKGKSSKSSKHASTAVIAGPIVGVLGALIIVVLF-FYCLRHYKRKR 137
                    3568888999999***********************999987776.5***9988875 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 3.2
                    XXXXXXXXXXXXX CS
  Glycophorin_A   9 sttgdkskasvta 21 
                    st  +++k++ t 
     EPX74366.1 294 STEDNEHKSTSTE 306
                    4444444444443 PP

>> Mid2  Mid2 like cell wall stress sensor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.0   1.7e-07   0.00043       8      81 ..      63     139 ..      57     163 .. 0.71
   2 ?   -3.9   0.6       4.2   1.1e+04     123     140 ..     285     302 ..     275     309 .. 0.49

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 1.7e-07
        Mid2   8 iiegktiLsdlyttvtytptataessnkskssGLskknrn.....iviGcvvGigvPlllvillllyifCiks.krtdfi 81 
                 ++  ++   d+ytt t+ p a+++  + ++s+G s+k  +     ++ G +vG+   l++   ++l+++C+++ kr  f+
  EPX74366.1  63 VVSTRASDGDTYTTGTAIPVASTTVASANNSKGKSSKSSKhastaVIAGPIVGVLGALII---VVLFFYCLRHyKRKRFL 139
                 55555556799********99999998899999888865422232666777777655555...56788999862455566 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 4.2
        Mid2 123 sddeeldlakaenndesl 140
                 +++++l+++++e+n++++
  EPX74366.1 285 NNKQNLSFDSTEDNEHKS 302
                 333344444444444433 PP

>> Amnionless  Amnionless
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0     6e-07    0.0015     311     399 ..      71     160 ..      53     187 .. 0.62
   2 ?   -1.0   0.1      0.22   5.7e+02     391     443 ..     274     322 ..     254     334 .. 0.61

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 6e-07
  Amnionless 311 adiaehgealgilsaeletsgasssdssaag.apgesaglvlgivfgl..vlllllllillllllrrkgvl.rlpqllkspsrreeveelkak 399
                  d  + g a+ ++s+++  +++s+++ss  + +++ s+++++g+++g+  +l++++l+++ l  ++rk  l   +++ ++  ++e+ + + ++
  EPX74366.1  71 GDTYTTGTAIPVASTTVASANNSKGKSS--KsSKHASTAVIAGPIVGVlgALIIVVLFFYCLRHYKRKRFLaEQQEFETQF-EEEKSRLAAMR 160
                 4555566666666665555555444444..55789999**********776666666666666666776663444433333.33333322222 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.22
  Amnionless 391 eeveelkakldkgfdnprFdnvesnekpeeeslegesavdnlsvsssevedee 443
                   ++++++ ++++ +n  Fd++e+ne+++   ++ +++ ++l ++s+++e+ +
  EPX74366.1 274 VSISSVNDLNENNKQNLSFDSTEDNEHKS---TS-TESSSELFFESDDKEKLK 322
                 45556666666777788888775555544...23.333345666666666544 PP

>> TMEM154  TMEM154 protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00017      0.43       7      90 ..      54     137 ..      44     159 .. 0.66
   2 ?    0.2   0.5      0.25   6.5e+02      21     103 ..     299     318 ..     271     335 .. 0.50

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00017
     TMEM154   7 sgdtaletatleeesadatsaasteseslkqeeakeslssaelsnesdqlelvlmiiiPlvllillllvviiliqkkkrkrsKd 90 
                 sgd a  ++ +++  +d  + +  +  ++++++     +s   s +s++ +   +i+ P v ++  l++v+++    ++ ++K 
  EPX74366.1  54 SGDHAYYSTVVSTRASDGDTYTTGTAIPVASTTVASANNSKGKSSKSSKHASTAVIAGPIVGVLGALIIVVLFFYCLRHYKRKR 137
                 678888888888877776666555566666666666677777788889999999999999966555555555543444444443 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.25
     TMEM154  21 sadatsaasteseslkqeeakeslssaelsnesdqlelvlmiiiPlvllillllvviiliqkkkrkrsKddekseaesdelds 103
                   ++ts+ s+ se +                e                                                +d+
  EPX74366.1 299 EHKSTSTESS-SELFF---------------E-----------------------------------------------SDDK 318
                 2222222222.22222...............1...............................................3333 PP

>> FAM163  FAM163 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   8.3e-05      0.21       3      58 ..     104     158 ..     102     189 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 8.3e-05
      FAM163   3 aGtvvitGGilatviLLciiavLCyCRLqYYCCkkdeseeeeeeepefav.leplac 58 
                 a t vi+G i+     L+i+ +  yC L +Y  k+  +e+ +e e +f++ ++ la+
  EPX74366.1 104 ASTAVIAGPIVGVLGALIIVVLFFYC-LRHYKRKRFLAEQ-QEFETQFEEeKSRLAA 158
                 88********9988888888777888.8999999988888.5555556552222322 PP

>> Tmemb_9  TMEM9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00016      0.41      57     108 ..     113     163 ..      84     173 .. 0.72
   2 ?   -1.4   0.2      0.74   1.9e+03      88     111 ..     279     302 ..     267     317 .. 0.52

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00016
     Tmemb_9  57 vivvislLviYmlflllldpllnkrkkkasyqehtneedetseslssasqsl 108
                 ++ v+++L+i +lf+ +l    +kr   a++qe++++ +e++++l+++ +++
  EPX74366.1 113 IVGVLGALIIVVLFFYCLRHYKRKR-FLAEQQEFETQFEEEKSRLAAMRKNN 163
                 7889*****************9999.55555555555555555555444443 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.74
     Tmemb_9  88 qehtneedetseslssasqslelr 111
                  ++ ne+++++ s+ s++++++++
  EPX74366.1 279 VNDLNENNKQNLSFDSTEDNEHKS 302
                 444455544444444444332222 PP

>> Syndecan  Syndecan domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.2   4.8e-05      0.12      10      35 ..     106     131 ..      99     136 .. 0.88
   2 ?   -3.1   0.2         3   7.6e+03      40      50 ..     195     205 ..     194     208 .. 0.76
   3 ?   -3.0   0.2       2.8   7.1e+03      44      61 ..     282     299 ..     281     300 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 4.8e-05
    Syndecan  10 aaviggvvvgllfaillvlflvYRmr 35 
                  avi+g +vg+l a ++v++  Y +r
  EPX74366.1 106 TAVIAGPIVGVLGALIIVVLFFYCLR 131
                 79******************999988 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 3
    Syndecan  40 GSYaLdepkks 50 
                 GSY  d+++ +
  EPX74366.1 195 GSYYYDKRNSE 205
                 89999988765 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 2.8
    Syndecan  44 LdepkksnaaYkkaptkE 61 
                 L+e++k+n ++  ++++E
  EPX74366.1 282 LNENNKQNLSFDSTEDNE 299
                 899999999998877776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (345 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1098  (0.0612416); expected 358.6 (0.02)
Passed bias filter:                      707  (0.0394333); expected 358.6 (0.02)
Passed Vit filter:                        94  (0.0052429); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.55u 0.29s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 2328.22
//
Query:       EPX74367.1  [L=386]
Description: SGT1-like protein Git7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-32  112.0   1.9    2.8e-32  110.7   1.9    1.8  1  SGS       SGS domain
    2.9e-14   53.8   0.2    5.7e-14   52.9   0.2    1.5  1  CS        CS domain
  ------ inclusion threshold ------
      0.084   12.6   0.2       0.21   11.4   0.2    1.6  1  DUF5096   Domain of unknown function (DUF5096)


Domain annotation for each model (and alignments):
>> SGS  SGS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.7   1.9   4.7e-36   2.8e-32       1      83 []     306     384 ..     306     384 .. 0.93

  Alignments for each domain:
  == domain 1  score: 110.7 bits;  conditional E-value: 4.7e-36
         SGS   1 kdWdklekelekeekeekkeeegeaalnklFkklYadadedtrrammKSyveSnGtvLstnWeevkkkkvetkpPegmeakkw 83 
                 k+Wd+l +e++kee+e     +g+aal klF++lY++ad+dtrrammKSy+eSnGt+LstnW++v+ +k+et+pP+gme kk+
  EPX74367.1 306 KNWDHLLNEADKEEEE----PTGDAALTKLFQELYQNADDDTRRAMMKSYTESNGTSLSTNWKDVSGRKFETRPPKGMEPKKY 384
                 79*******9955443....459**********************************************************97 PP

>> CS  CS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.9   0.2   9.6e-18   5.7e-14       2      76 .]     195     271 ..     194     271 .. 0.91

  Alignments for each domain:
  == domain 1  score: 52.9 bits;  conditional E-value: 9.6e-18
                 SCEEEEETTEEEEEEE-TTCTTTTTCEEEEEETTEEEEEETSCEEEEECE........BSS-BETTTEEEEEETTEEEEEEEB CS
          CS   2 kydWyQtldeVvvtiyvkkvnikkkdvkvefkerslkvkigkeklliege........LfgpIdpeesswtieskkveitLkK 76 
                 ++dW+Q ++++ + iy+k+v  k ++++v++k++s++++     +l++++        L++ Id++ ss+++ s+k+e++LkK
  EPX74367.1 195 RFDWSQASSTISLDIYAKNV--KPENLTVNIKTTSVSIHA----ILMDNScytlnldpLAHAIDTDASSYRLFSTKIEVILKK 271
                 89*****************9..*****************8....44444448888888************************9 PP

>> DUF5096  Domain of unknown function (DUF5096)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.2   3.5e-05      0.21      91     144 ..     168     218 ..     160     230 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 3.5e-05
     DUF5096  91 iyennggiikkknresndvsIaladkknievqekktaksvlflgvpenakeikn 144
                 +y+nn  +i + n   ++ +I ladk+++      +a s++ l+++ ++ + +n
  EPX74367.1 168 SYQNNSSMIADANSTVQSKVISLADKTRFDW---SQASSTISLDIYAKNVKPEN 218
                 79*****************************...88999********5554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (386 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       764  (0.0426125); expected 358.6 (0.02)
Passed bias filter:                      451  (0.0251548); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2666.72
//
Query:       EPX74368.1  [L=185]
Description: intermembrane space protein sorting protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.5e-53  180.1   0.3    2.9e-53  179.9   0.3    1.0  1  PRELI         PRELI-like family
  ------ inclusion threshold ------
      0.036   13.6   0.0      0.041   13.5   0.0    1.2  1  IP_trans      Phosphatidylinositol transfer protein
       0.16   12.0   0.1       0.16   12.0   0.1    1.6  2  Mob1_phocein  Mob1/phocein family


Domain annotation for each model (and alignments):
>> PRELI  PRELI-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  179.9   0.3   4.9e-57   2.9e-53       1     155 [.      15     169 ..      15     171 .. 0.97

  Alignments for each domain:
  == domain 1  score: 179.9 bits;  conditional E-value: 4.9e-57
                 HHHHHHHHT--SBTTBTTEEEEEEEEEEEET.TSEEEEEEEEEEEEESSTTSTTTSSSEEEEEEEEEEEEETTTTEEEEEEEESSSTTTEEEEEEEEEE CS
       PRELI   1 eqVtaaflrryPnpiskhvisvdvlereldd.egklvteRlitlqvrvPrwlkkligvaktvyvleesvvdlkkrtlkletrNltfssllkveErvvYk 98 
                 e+V+aa++++yPn++++hv++vd+l+r++ + +++l+teRlit+++ vPrw+ kl+++a+++yv+e+s++dlk+rtl+l+++N+tf+++l+v+E+v+Y+
  EPX74368.1  15 EKVSAAHWQKYPNEYATHVVAVDTLDRKVLPdTQTLYTERLITCRQGVPRWILKLVDGAQECYVREVSYMDLKSRTLTLYSSNMTFCDRLRVHETVTYS 113
                 79**************************8875888**************************************************************** PP

                 EETTTT..EEEEEEEEEE..HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       PRELI  99 phpensekTvlkqeakisvkgslfglsskveklllkkfsenakkgkeglesvlkele 155
                 ph e  + Tv++qea+i++ + +++l++ ve+++++++s++a+ gk g+e vlk+++
  EPX74368.1 114 PHYE-LNATVFRQEARIEALAYMKRLANIVEQWSVDRISQKASIGKLGFENVLKQIN 169
                 ***9.899**********************************************976 PP

>> IP_trans  Phosphatidylinositol transfer protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   6.9e-06     0.041      52     126 ..      46     123 ..      17     158 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 6.9e-06
                 S-EEEEEEEEEE-GGGS-HHHHTTS-.TTTTEEEEEEE.EETTEEEEEEEET.TTGGGEEEEEEEEEESSSS--SSTT CS
    IP_trans  52 ggkgqytekiyhlesklPswlrallp.kkaltveekaw.naypytkTvytnp.lmkekfsikietvhkedngtqeNvf 126
                  ++  yte+++   + +P+w+ +l++  + ++v e ++ +    t T y+++  + +++ ++ + +++++ + +  vf
  EPX74368.1  46 DTQTLYTERLITCRQGVPRWILKLVDgAQECYVREVSYmDLKSRTLTLYSSNmTFCDRLRVHETVTYSPHYELNATVF 123
                 46789********************98999*******95667788999998875569888887777777766665555 PP

>> Mob1_phocein  Mob1/phocein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.7      0.66   3.9e+03     125     152 ..       7      34 ..       1      38 [. 0.75
   2 ?   12.0   0.1   2.7e-05      0.16      33     121 ..      87     173 ..      73     176 .. 0.71

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.66
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Mob1_phocein 125 aHiYihHfeeiaeleleahlntcfkhfv 152
                   +H+++  fe++ + + +++ n   +h v
    EPX74368.1   7 CHLFHYPFEKVSAAHWQKYPNEYATHVV 34 
                   5888988999988888888887777766 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 2.7e-05
                   xxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Mob1_phocein  33 fneinllygtisefcteqscp.tmsagpkyeYlwadeevkkpvklsApeYidllmdwiesqlndlfpskagspfpknflkvvkkilkrlf 121
                     +  +ly++   fc + +   t++  p+ye   +   +++++++ A  Y+++l + +e+   d   +ka s  +  f++v+k+i   +f
    EPX74368.1  87 KSRTLTLYSSNMTFCDRLRVHeTVTYSPHYELNATV--FRQEARIEALAYMKRLANIVEQWSVDRISQKA-SIGKLGFENVLKQINLSVF 173
                   555556677766777665554144455544444444..89********************9999777777.4447788888888876666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       430  (0.0239835); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1310.07
//
Query:       EPX74369.1  [L=494]
Description: U2 snRNP-associated protein sap61 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.2e-80  267.9   1.5    6.1e-77  257.6   0.2    2.4  2  DUF3449          Domain of unknown function (DUF3449)
    2.4e-24   85.7   4.8    5.5e-24   84.5   4.8    1.7  1  SF3A3            Pre-mRNA-splicing factor SF3A3, of SF3a comp
    3.8e-08   33.4  11.1    2.5e-07   30.8   6.6    2.7  2  zf-C2H2_jaz      Zinc-finger double-stranded RNA-binding
      6e-08   32.4   1.1    1.5e-07   31.2   1.1    1.7  1  SF3a60_bindingd  Splicing factor SF3a60 binding domain
      1e-07   32.1   5.2    2.2e-05   24.7   3.1    2.5  2  zf-met           Zinc-finger of C2H2 type
      0.001   19.2   1.5      0.001   19.2   1.5    2.7  2  zf-DBF           DBF zinc finger
     0.0044   17.3   3.8      0.085   13.2   1.4    2.8  2  zf-C2H2_2        C2H2 type zinc-finger (2 copies)
  ------ inclusion threshold ------
       0.08   13.1   1.6       0.17   12.1   1.6    1.5  1  DUF719           Protein of unknown function (DUF719)
        9.1    6.0   8.8         27    4.4   0.0    3.2  3  DUF4637          Domain of unknown function (DUF4637)


Domain annotation for each model (and alignments):
>> DUF3449  Domain of unknown function (DUF3449)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.1   0.00055       1.1      91     129 ..     240     277 ..     233     285 .. 0.88
   2 !  257.6   0.2   3.1e-80   6.1e-77       2     184 .]     300     493 ..     299     493 .. 0.90

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00055
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
     DUF3449  91 kCeiCgnavYkGrkaFekHFseerHaeglkcLgientkl 129
                  Ce C    Y+ + +++ H + ++H++   +L++ ++++
  EPX74369.1 240 YCEACEK-YYQKKSVYDAHLTSKKHKKAAERLDVRKSQN 277
                 5****65.6999*********************998876 PP

  == domain 2  score: 257.6 bits;  conditional E-value: 3.1e-80
                 HHHHHHHHHHTHHHHHHHHHHHHHHHT--HHHHHHH...................HH--SS--B-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
     DUF3449   2 elkikklaellskeieetkenverkqaltaeereee...........eeeeeeekkeeeedeeeeeeeekiynplnlplgwdgkPipyWLykLhgLgke 89 
                 e+ ikkl+++l++e+++t+env r+q+lta+er +e           ++ e+e+k++e+e++++ee e kiynpl+lp+gwdgkPip+WL+kLhgLgke
  EPX74369.1 300 EFIIKKLLDILNEERQATRENVVRRQTLTASERLAEilaaereaveaSAVENESKQKEDENSDDEEGEGKIYNPLKLPIGWDGKPIPFWLWKLHGLGKE 398
                 899******************************99988776655543222222223344444446788899**************************** PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
     DUF3449  90 ykCeiCgnavYkGrkaFekHFseerHaeglkcLgientklfkeitkiedaleLweklkkekkkekakeeeeveveDeeGnvmskkvYedLkkqgl 184
                 ++CeiCgn+vY+GrkaF+kHF+e+rH++glkcLgi+ + lf++i +i++al+Lw+k+k++++k++++  + +e+eD+eGnvms+kvY+dLk qgl
  EPX74369.1 399 FPCEICGNYVYMGRKAFDKHFTEQRHIYGLKCLGISPSPLFNQIVSIDEALQLWQKIKADSRKQETSVANLNEMEDDEGNVMSEKVYNDLKAQGL 493
                 **********************************************************************************************8 PP

>> SF3A3  Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.5   4.8   2.7e-27   5.5e-24       1      78 [.     126     203 ..     126     204 .. 0.94

  Alignments for each domain:
  == domain 1  score: 84.5 bits;  conditional E-value: 2.7e-27
       SF3A3   1 lFsgeEqyGkylDLnelyeeylnlkeik.ldYlqYLesfdkfseipkkqkkskeYkeYlkeLleYLesfikrtqpLedl 78 
                 lF geE+yG+++DLnely+e++nlk+i+ ++Yl+YL+++d+f+ +pk++k +++Y +Yl++L+eYL sf++rt+pL+d+
  EPX74369.1 126 LFRGEEMYGRFMDLNELYDEFVNLKGIQpISYLEYLSKLDDFNLVPKSEK-NHSYVSYLRHLYEYLFSFFQRTHPLKDI 203
                 59***********************9977*************88888766.599**********************997 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   6.6   1.3e-10   2.5e-07       3      27 .]     240     264 ..     240     264 .. 0.99
   2 ?    4.2   0.1     0.027        54       2      26 ..     399     424 ..     398     425 .. 0.87

  Alignments for each domain:
  == domain 1  score: 30.8 bits;  conditional E-value: 1.3e-10
                  BBTTTTBBBSSHHHHHCCTTSHHHH CS
  zf-C2H2_jaz   3 YCvlCdKyFksenaldnHlkSKkHK 27 
                  YC++C+Ky+++ +++d+Hl+SKkHK
   EPX74369.1 240 YCEACEKYYQKKSVYDAHLTSKKHK 264
                  9***********************9 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.027
                  CBBTTTT.BBBSSHHHHHCCTTSHHH CS
  zf-C2H2_jaz   2 fYCvlCd.KyFksenaldnHlkSKkH 26 
                  f C++C    +   +a+d+H++  +H
   EPX74369.1 399 FPCEICGnYVYMGRKAFDKHFTEQRH 424
                  679999889999999******99999 PP

>> SF3a60_bindingd  Splicing factor SF3a60 binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2   1.1   7.5e-11   1.5e-07       2      27 .]      76     101 ..      75     101 .. 0.89

  Alignments for each domain:
  == domain 1  score: 31.2 bits;  conditional E-value: 7.5e-11
  SF3a60_bindingd   2 isggDpFseFYkrLkeIKdyHrkYPN 27 
                      is ++ ++ FYk+L+eI+d+H++YP+
       EPX74369.1  76 ISRDEGLDGFYKELDEIRDFHHRYPD 101
                      677777888****************7 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   3.1   1.1e-08   2.2e-05       2      25 .]     240     263 ..     240     263 .. 0.99
   2 !    6.9   0.0    0.0043       8.5       3      20 ..     401     419 ..     399     420 .. 0.93

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 1.1e-08
      zf-met   2 yCelCnvtfnsesqlksHlqGKkH 25 
                 yCe+C ++++ +s++++Hl +KkH
  EPX74369.1 240 YCEACEKYYQKKSVYDAHLTSKKH 263
                 9*********************** PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0043
      zf-met   3 CelC.nvtfnsesqlksHl 20 
                 Ce+C n ++ ++++++ H+
  EPX74369.1 401 CEICgNYVYMGRKAFDKHF 419
                 ******************6 PP

>> zf-DBF  DBF zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   1.5     5e-07     0.001       4      29 ..     239     267 ..     236     273 .. 0.84
   2 ?    0.3   1.6      0.38   7.6e+02       6      25 ..     401     424 ..     397     426 .. 0.71

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 5e-07
      zf-DBF   4 GYCEnCrvkfed...leeHlksekHrkFa 29 
                  YCE C++ +++   ++ Hl+s+kH+k a
  EPX74369.1 239 EYCEACEKYYQKksvYDAHLTSKKHKKAA 267
                 5*********8655589*********966 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.38
      zf-DBF   6 CEnCrvk.f...edleeHlksekH 25 
                 CE+C +  +   + +++H ++++H
  EPX74369.1 401 CEICGNYvYmgrKAFDKHFTEQRH 424
                 888864323444678999999999 PP

>> zf-C2H2_2  C2H2 type zinc-finger (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   1.4   4.3e-05     0.085      29      81 ..     196     269 ..     170     278 .. 0.68
   2 ?    3.2   0.0     0.057   1.1e+02      48      76 ..     396     425 ..     391     429 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 4.3e-05
   zf-C2H2_2  29 ereylvdleglleylrekiee.....................kleClyCekefkslealreHmkkkgHckinee 81 
                 +++ l+d+++++++ + + +                      +  C  Cek  ++++ + +H+++k+H+k +e+
  EPX74369.1 196 RTHPLKDIHRIVSVFQTEFDVsreaglpgqavgleqsngsssGEYCEACEKYYQKKSVYDAHLTSKKHKKAAER 269
                 455566666666666666555556666666666666666666789*******99****************8764 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.057
   zf-C2H2_2  48 eekleClyCeke.fkslealreHmkkkgHc 76 
                  +++ C +C++     ++a+ +H ++++H 
  EPX74369.1 396 GKEFPCEICGNYvYMGRKAFDKHFTEQRHI 425
                 56789****999788**************6 PP

>> DUF719  Protein of unknown function (DUF719)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.6   8.4e-05      0.17     112     175 ..     295     358 ..     222     364 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 8.4e-05
      DUF719 112 GLdaLefiGkktmdvlqegdpglkkkkallleaekkptLsqvLreaKekeeqeekaeeeaqeek 175
                    aLefi kk +d+l+e+    ++     ++ +    L ++L   +e  e  + ++e++q+e+
  EPX74369.1 295 EIAALEFIIKKLLDILNEERQATRENVVRRQTLTASERLAEILAAEREAVEASAVENESKQKED 358
                 4679**************9888777544444446777899999777776666666666655554 PP

>> DUF4637  Domain of unknown function (DUF4637)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0     0.014        27     101     139 ..     214     252 ..     199     267 .. 0.88
   2 ?    2.1   2.7     0.069   1.4e+02      34      66 ..     341     373 ..     312     376 .. 0.63
   3 ?    0.9   0.3      0.17   3.3e+02       4      32 ..     451     479 ..     448     492 .. 0.75

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.014
     DUF4637 101 aPadrkrslPeepcvletrrrpprrGgcarceilfckkc 139
                 + + r+  lP++   le+    ++   c+ ce  + kk 
  EPX74369.1 214 FDVSREAGLPGQAVGLEQSNGSSSGEYCEACEKYYQKKS 252
                 66889999************9999999*****9999985 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.069
     DUF4637  34 draeeesaaegeeesreaeeaegrekgsvsysP 66 
                  +a e+sa e+e++++e e+++ +e     y P
  EPX74369.1 341 REAVEASAVENESKQKEDENSDDEEGEGKIYNP 373
                 334455555555555555555555555555555 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.17
     DUF4637   4 lwkkeleeleareveeeeaeeeseeedee 32 
                 lw+k   +++++e+   + +e +++e + 
  EPX74369.1 451 LWQKIKADSRKQETSVANLNEMEDDEGNV 479
                 99999999999999999888887777655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (494 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1385  (0.0772491); expected 358.6 (0.02)
Passed bias filter:                      700  (0.0390429); expected 358.6 (0.02)
Passed Vit filter:                        78  (0.00435049); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.66u 0.30s 00:00:00.96 Elapsed: 00:00:00.47
# Mc/sec: 3141.48
//
Query:       EPX74370.1  [L=190]
Description: transport complex subunit Cog2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.7e-14   53.4   5.3    4.2e-14   52.8   5.3    1.3  1  COG2          COG (conserved oligomeric Golgi) complex compon
     0.0013   19.2   5.2     0.0022   18.4   5.2    1.3  1  DUF16         Protein of unknown function DUF16
     0.0019   18.0   1.5     0.0028   17.5   1.5    1.2  1  SPAM          Salmonella surface presentation of antigen gene
     0.0051   15.4   1.1      0.006   15.2   1.1    1.1  1  Zw10          Centromere/kinetochore Zw10
     0.0063   16.2   1.0      0.008   15.9   1.0    1.4  1  Med4          Vitamin-D-receptor interacting Mediator subunit
      0.008   16.7   2.7      0.013   16.0   2.7    1.4  1  APG6_N        Apg6 coiled-coil region
  ------ inclusion threshold ------
       0.08   13.0   3.5       0.33   11.1   0.3    2.7  2  Vps51         Vps51/Vps67
       0.14   11.7   2.0       0.15   11.6   2.0    1.1  1  Exonuc_VII_L  Exonuclease VII, large subunit


Domain annotation for each model (and alignments):
>> COG2  COG (conserved oligomeric Golgi) complex component, COG2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.8   5.3   1.9e-17   4.2e-14      11     126 ..      29     143 ..      11     149 .. 0.92

  Alignments for each domain:
  == domain 1  score: 52.8 bits;  conditional E-value: 1.9e-17
        COG2  11 pdFdpdqFvselrhgvpLeslrrdLeaylkllekellelvnedyadFvslSghLvglqeeleevesplaaarkkvesvreklsereeeveskleeakel 109
                 ++F pd+F+ + +++  L+ l  +L    +  +kel++lv ++y+dFv l++++   +++++ + s +++  +++++ + ++++ e+++++ ++ +k+l
  EPX74370.1  29 DEFTPDEFLVS-KRFLGLDGLITELSRVFENANKELMDLVKDNYQDFVRLGARMNAGNQKVDVLLSAIQRSEEQIKKSQTSVQNYENDLRDLINRRKNL 126
                 79******988.99************************************************************************************* PP

        COG2 110 eekrellklllkldevv 126
                 e+++++   ll+l++ +
  EPX74370.1 127 EKEKQIASELLLLQRHL 143
                 ****9999998887765 PP

>> DUF16  Protein of unknown function DUF16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   5.2   9.9e-07    0.0022      22     101 ..      60     145 ..      58     148 .. 0.88

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 9.9e-07
                 HHHHHHB-..BHHHHHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHH.............HHHHHHHHHHHHHHHHHH CS
       DUF16  22 rkqlnefkdsnkqrLkkieakvdklgeqinkleqkvekqgekikelkveqkaqgeeln......kvdetleliletLqkinkRlDs 101
                  k+l +  ++n q++ ++ a++++ ++++++l  ++++ +e+ik+ +  ++  +++l       k  e  + i+  L  ++  lD 
  EPX74370.1  60 NKELMDLVKDNYQDFVRLGARMNAGNQKVDVLLSAIQRSEEQIKKSQTSVQNYENDLRdlinrrKNLEKEKQIASELLLLQRHLDF 145
                 69999999********************************************9999988888877777777888888777777775 PP

>> SPAM  Salmonella surface presentation of antigen gene type M protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   1.5   1.2e-06    0.0028       4      99 ..      76     172 ..      73     181 .. 0.84

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 1.2e-06
        SPAM   4 vLlarCevaqsrCeaallqlkdeereldkeeeaieeqragLkeLLdlqrpegksld.reelyallrkqaivrrqlkeLeLqlvaiqekrselqkeke 99 
                  L ar ++ +++ ++ l  +++ e++++k +  +++ +++L+ L++ ++  +k+ +  +el  l+r++  ++   ++  L l++++  +   q +k+
  EPX74370.1  76 RLGARMNAGNQKVDVLLSAIQRSEEQIKKSQTSVQNYENDLRDLINRRKNLEKEKQiASELLLLQRHLDFLKTSSRNHPLWLDSLNTVQCLSQTHKD 172
                 5778999999************************************9998665433157999*******9999999988888888776666665555 PP

>> Zw10  Centromere/kinetochore Zw10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   1.1   2.7e-06     0.006      13     114 ..      46     146 ..      44     186 .. 0.70

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 2.7e-06
        Zw10  13 ekkisklekkveeikeevskmivkkYseflelsssaeellerveslskeidalkkkven..eieqdlkaaveelaelkqqlkekevvlellealkkiee 109
                  + i++l++  e+  +e+++ ++++Y++f+ l    +  +++v+ l + i+ + +++++     q+ ++    l +  ++l++++   ++  +l  ++ 
  EPX74370.1  46 DGLITELSRVFENANKELMDLVKDNYQDFVRLGARMNAGNQKVDVLLSAIQRSEEQIKKsqTSVQNYENDLRDLINRRKNLEKEK---QIASELLLLQR 141
                 6789*****************************************************9832222333333344444445555444...44444444444 PP

        Zw10 110 aleel 114
                  l  l
  EPX74370.1 142 HLDFL 146
                 44444 PP

>> Med4  Vitamin-D-receptor interacting Mediator subunit 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   1.0   3.6e-06     0.008      27      89 ..      84     138 ..      47     189 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 3.6e-06
        Med4  27 nearilqLraeveslDekikeivksLkeyekeLkavpdqenskldtasiklaekrevdseeLL 89 
                  +++++ L   ++  +e+ik+ ++s+ +ye+ L+ ++     +   +  +l++++++ se+LL
  EPX74370.1  84 GNQKVDVLLSAIQRSEEQIKKSQTSVQNYENDLRDLI-----N---RRKNLEKEKQIASELLL 138
                 5777888888999************************.....2...56677888888888887 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   2.7   5.7e-06     0.013      10      98 ..      48     150 ..      45     172 .. 0.78

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 5.7e-06
      APG6_N  10 Lleeldkqleqaeke.....rdaYeeflkklkkekkeeek..........qdeeleeleeeleklekeeeelleeLkelekereeleaelaaleeelea 93 
                 L++el + +e+a+ke     +d+Y++f +   + +  ++k          ++e++++++ ++++ e++ ++l++  k+leke+ ++++el  l++ l+ 
  EPX74370.1  48 LITELSRVFENANKElmdlvKDNYQDFVRLGARMNAGNQKvdvllsaiqrSEEQIKKSQTSVQNYENDLRDLINRRKNLEKEK-QIASELLLLQRHLDF 145
                 566666666666666444447899999986665544443488999999999999***************************97.688888888888877 PP

      APG6_N  94 leeee 98 
                 l+   
  EPX74370.1 146 LKTSS 150
                 77655 PP

>> Vps51  Vps51/Vps67
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.3   0.00015      0.33      22      57 ..      43      78 ..      27     107 .. 0.71
   2 ?    1.6   1.5      0.14     3e+02      18      34 ..     113     129 ..      81     150 .. 0.66

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00015
       Vps51 22 kellkveasllseiraldselkalVydnYskLisas 57
                 +l+ +  +l +  ++ ++el  lV dnY++++   
  EPX74370.1 43 LGLDGLITELSRVFENANKELMDLVKDNYQDFVRLG 78
                556666678889999*****************9765 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.14
       Vps51  18 kstlkellkveasllse 34 
                 +++l++l++++++l++e
  EPX74370.1 113 ENDLRDLINRRKNLEKE 129
                 22455555555555555 PP

>> Exonuc_VII_L  Exonuclease VII, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   2.0   6.9e-05      0.15     161     240 ..      53     134 ..      19     183 .. 0.54

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 6.9e-05
  Exonuc_VII_L 161 krlleekkqrlekl.asrl...kspeellerkrqrldeleerleralkkqlkkkrerleelkerlk......ekleekkerlkklkerle 240
                   +r +e+++++l  l + ++    +  +++++ +q++d l + ++r  ++q+kk+++ ++++++ l+      +       +l+k k+  +
    EPX74370.1  53 SRVFENANKELMDLvKDNYqdfVRLGARMNAGNQKVDVLLSAIQR-SEEQIKKSQTSVQNYENDLRdlinrrK-------NLEKEKQIAS 134
                   344444444444431222222134455666666666666666666.566666666666666666642332221.......2222111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1755  (0.0978861); expected 358.6 (0.02)
Passed bias filter:                      759  (0.0423336); expected 358.6 (0.02)
Passed Vit filter:                        79  (0.00440627); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 1293.45
//
Query:       EPX74371.1  [L=1260]
Description: elongator subunit Iki3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.6e-290  965.7   0.0   4.1e-290  965.0   0.0    1.3  1  IKI3      IKI3 family
     0.0057   16.5   8.8      0.071   13.0   0.1    4.1  3  Clathrin  Region in Clathrin and VPS
  ------ inclusion threshold ------
        2.8    6.7   6.6       0.46    9.3   0.1    2.1  2  LMBR1     LMBR1-like membrane protein


Domain annotation for each model (and alignments):
>> IKI3  IKI3 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  965.0   0.0  6.8e-294  4.1e-290       1     930 [.       1     904 [.       1     905 [. 0.94

  Alignments for each domain:
  == domain 1  score: 965.0 bits;  conditional E-value: 6.8e-294
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXX......XXXXXXXXXXXXXXXXXXXXXXXX CS
        IKI3   1 MrNlkvlseralkpesesesdlkvlasvfdtesdsilivlssteseaaievqrfekdsevevlasleaeel...eekkdkivsveyladkeelvlalas 96 
                 MrNl++ s++a+ + s+      ++  +fdt +++i+++++ ++++  i+v r ++d  ve l++ + +     +++ d+i  +++l d++++++ +++
  EPX74371.1   1 MRNLIIQSHHAYPEISN-----AIQSIAFDTVNNTIYVACGLNDNNPGITVYRIHEDNVVEYLTEHDDPAYlkeDGSWDQICNMQFLGDSMSICISMKG 94 
                 9********99998887.....57999*******************************88999999987668888899********************* PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        IKI3  97 GdillvtvdsdaeekeveivGsiesGieaaawspdeellalvtgeekvvlmtrdfepisetsldaddlke.skhvsvgwGkkeTqfkgkeakaaekelr 194
                 Gdi++v++++ + e +ve++G++e+Gi a++wspde++l ++tg ++++ mt+ f++i+et+l+++dl e +kh+svgwG+ eTqf+gk+ +a   +lr
  EPX74371.1  95 GDIIMVKTEPAPGEPVVEVIGNVENGIIASCWSPDEQVLSILTGGNTILHMTKRFDVIAETTLSENDLSEfNKHISVGWGRSETQFRGKRVRA---QLR 190
                 ****************************************************************9999999*********************9...9** PP

                 XXXXX..XXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXX CS
        IKI3 195 dptlp..vdegkls.lddskvtIsWRGDgeYfavssleaetgerralrvyeregaLdsvsekvdgleeaLaWrPsGsliAstqr...kkdksldvvfFE 287
                 dptlp  +degkls +dd+kv+++WRGDg+Y+a++ +  e g+rra+rvy+reg Lds+se++dg ++ L+W+PsGs++As+q+   + +  ++v+fFE
  EPX74371.1 191 DPTLPeqIDEGKLSdVDDGKVNMCWRGDGAYVAINRI--EAGSRRAIRVYSREGVLDSISEPQDGHQSFLSWKPSGSVLASVQSsfgDAN-ESKVIFFE 286
                 *************************************..88889***************************************5331334.69****** PP

                 XXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXX CS
        IKI3 288 rNGLrhgefslrlekeeeevqsLaWsadSevLavrledrvqlwtisNyhWYLKqelrysasegveevkWdpekpltLlvltesgkievvdfafetavse 386
                 rNGLrhgefsl   +++e+ + LaW++ S++La+++ +++ lwt++NyhWYLK+ + ++++++   + W+pe+ ++L v++  +++e++d+ f++ + +
  EPX74371.1 287 RNGLRHGEFSLGC-PSNEKFTGLAWNNASSILAISTPQSIALWTTGNYHWYLKKTIPIASHAS---FCWHPERSQSLFVTNG-SHVERIDLEFAYPTCK 380
                 ************9.*******************************************887766...89**********9999.**************** PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.....XXXX CS
        IKI3 387 tssendvgtvaViDgkklllTplslanvPPPmsareleleaavndvafsksnsktlavllsdgelaiaeldlekakaskepklvsevsknstasesvev 485
                 t  ++d g++ ViDg++ll+Tpl  an+PPP+s  +l+l+ ++  v++++ + +  + l  + ++++++ +      +++p+ + +++++     ++ +
  EPX74371.1 381 TAAPTDYGLTPVIDGSSLLVTPLYFANIPPPLSLCNLSLPFKIELVSLDPFSRS--IYLSDNYKVHVYQYE-----PKRKPTFSYACDIS-----EY-T 466
                 **************************************************9987..666667777777732.....23445555554443.....44.3 PP

                 XXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXX..XXXXXXXX CS
        IKI3 486 alaklkqlafinddtllvlassaenlseillvevddaee...kvlvssstslekvvlakssadastsvvvetadGkvlelsaeeekeei..tklpqlcr 579
                 ++ ++k l+ ++++++++la++++n ++i l++++  ++    +++ ++t l k  + +s  ++ +++++++++G++++l++++ + e   + lp+ c 
  EPX74371.1 467 SELNVKRLLALESSKFIILADDRNNKTKICLFQSTGVKDescMASLLNVTDLGKNFINVSYIEKLAKLFLQSENGEIFSLDINNFNVEKfhCDLPKACA 565
                 456788899999999999999999*********9766664456677778888888999999999889***************9988888889******* PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXX CS
        IKI3 580 dfrvlqveeeeeklllvgLtsrgkLyankkllasdvtSfavtdsfLlfttvshvlkfvdlksevkdlevveksreesaderirqvErGsrlVavvpska 678
                 +f+ + ++++    + +gLts+g+Lya+++ll++ v Sf +td+fL ftt +h lkfv+l+  v+d++vve++  e++der+r+vErG+++V+++psk+
  EPX74371.1 566 WFTTVLIDDSV---IPIGLTSSGRLYAEQRLLSTGVLSFYCTDRFLAFTTNKHILKFVHLQPFVDDMKVVEDDGVERHDERCRAVERGAKVVTMMPSKM 661
                 *******9998...************************************************************************************* PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        IKI3 679 svvLqmpRGNLEtiypriLvLaavrkalkakrYkeAfklcrthRidlnllvDydpelFlenveaFvrqvkkvdylnlFlssLkeeDvtktlYketlskt 777
                 +vvLqmpRGNLEti pri+vL++vrk+++  +Y +Afk+crthR+dln+l+Dydpe+F+ nv +Fv+q+ +vdyl+lF+ sLk eDvt+++Y +t+   
  EPX74371.1 662 AVVLQMPRGNLETIFPRIMVLNGVRKLIDVSDYSSAFKVCRTHRLDLNMLFDYDPEKFFLNVSSFVDQLGRVDYLDLFFASLKPEDVTQSMYMDTS--- 757
                 ************************************************************************************************... PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXX---HHHHHHHHTT- CS
        IKI3 778 kaskeakakakekdtkesKvnkvcdairkalekeeesekyllailtayvkkeppeleaaLkliaslkeedeeqaeealkyllfLvdvnklYdvALGlYd 876
                      +++  ++++t e+Kvn++c+a+r++l  +++ +k+ ++i+t+y +++pp++++aL++i+ l e+++++ ++ +++++fLvd+n l+d+ALGlYd
  EPX74371.1 758 -----KYKLSENQTTYENKVNTICKAVRDVLI-SKKDNKFFQSIITSYLCETPPNITEALNMISGLIESKSSSVDSVIEHMCFLVDINMLFDHALGLYD 850
                 .....667777788899**************8.9999************************************************************** PP

                 HHHHHHHHHCTT--GGGTHHHHHHHHCS-HHHHHHHHHHHHT-HHHHHHHHHCS CS
        IKI3 877 lelallvAqksqkDPkEYLpfLqeLkkleelrrkfeIDdyLkryekAlehlvea 930
                 l+lall+Aq+sqkDP+EY+pfLq+++k++ lrrkf+ID++Lkrye+ l+hl+e+
  EPX74371.1 851 LKLALLIAQQSQKDPREYVPFLQNFQKQDILRRKFNIDCHLKRYEHGLTHLKEI 904
                 ***************************************************987 PP

>> Clathrin  Region in Clathrin and VPS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   1.6     0.046   2.8e+02      74      94 ..     909     929 ..     848     944 .. 0.52
   2 !   13.0   0.1   1.2e-05     0.071      77     138 ..     943    1009 ..     940    1010 .. 0.87
   3 !    6.9   0.6   0.00088       5.3      75     130 ..    1001    1058 ..     999    1062 .. 0.73

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.046
                 THHHHHHHT-SSHHHHHHHHH CS
    Clathrin  74 ekvaklcekadlyeeavilyk 94 
                 e++ ++  k++ly++a++lyk
  EPX74371.1 909 EELKDYVVKHKLYRTALELYK 929
                 334444455555555555555 PP

  == domain 2  score: 13.0 bits;  conditional E-value: 1.2e-05
                  HHHHHT-SSHHHHHHHHHTTXTHSSHSSXSSSSHCSCHHH...HTTTTTXX..SHHHHHHHHHHHSS CS
    Clathrin   77 aklcekadlyeeavilykkinefkkaisllkklkdfddai...eyaakvsn..pelwekllealldk 138 
                  a++++++++ +ea i +  ++++++ai+ +k  +++++ +   ++  ++++  +e+++ l++ +l+k
  EPX74371.1  943 ANYLRENGKANEAAIAFESVGMISEAIEAYKSAGMWRECMsilQFSSTSDSkvEEIADNLANLCLEK 1009
                  799*************************************665444444447799999999999987 PP

  == domain 3  score: 6.9 bits;  conditional E-value: 0.00088
                  HHHHHH.HT-SSHHHHHHHHHTTXTHSSHSSXSSSSHCSCHHHHTTTTTX.XSHHHHH CS
    Clathrin   75 kvaklc.ekadlyeeavilykkinefkkaisllkklkdfddaieyaakvs.npelwek 130 
                   +a+lc ek+d+++ a+i +  ++++k+ai  + k  ++ +ai+ a++ + +p l ++
  EPX74371.1 1001 NLANLClEKRDYVDAAYIYLLYLSNVKEAIINMCKGTQYSEAIRLARTKEaDPSLFKD 1058
                  68999977777777777766669*******9645559******888765414666555 PP

>> LMBR1  LMBR1-like membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.1   7.8e-05      0.46     205     327 ..     754     902 ..     736     930 .. 0.64
   2 ?   -0.7   2.0     0.083     5e+02     220     320 ..    1105    1214 ..    1054    1235 .. 0.65

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 7.8e-05
       LMBR1 205 lyfeaaklntekeeaereledllkevkklrksisesdplrkyleeilkkvPeeiaeklks................nenkteeslaklekqlika.... 283
                 + ++ +kl+++++  e++++ ++k+v+ +  s+++++++++ ++  l ++P +i+e l+                 +                      
  EPX74371.1 754 MDTSKYKLSENQTTYENKVNTICKAVRDVLISKKDNKFFQSIITSYLCETPPNITEALNMisgliesksssvdsviE-----------------Hmcfl 835
                 344567899999999******************************************98877665533322222220.................12222 PP

       LMBR1 284 ......................lqkrertekqwkrllekalelediiknksskekefksses..srrg 327
                                        q++++  +++   l+++ + +di++ k +++ ++k+ e+  ++++
  EPX74371.1 836 vdinmlfdhalglydlklalliAQQSQKDPREYVPFLQNF-QKQDILRRKFNIDCHLKRYEHglTHLK 902
                 2223333333444444444444333333333333333333.444777777777777777666655555 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.083
       LMBR1  220 ereled.llkevkklrksisesdplr.kyleeilk.kvPeeiaeklks.........nenk.teeslaklekqlikalqkrertekqwkrllekale 303 
                  e +led + ++++ +++s+s +  l+ +y +   + k+  + a+++++         +++   ee+l+++ k+li++++  + +  ++ ++l ++  
  EPX74371.1 1105 EGNLEDqTPDDLSLASTSVSTNRSLYtRYTQSTAStKMTRNTAKNNRRlekkrargkKGTVfEEEYLVNSLKRLISRVESMRAETYRLLEALMRC-- 1199
                  45555313345555555555555533355554444344444444444477778888844445999999999999888888888888888888888.. PP

       LMBR1  304 lediiknksskekefks 320 
                    d+  ++s+ ++ f+ 
  EPX74371.1 1200 --DMYTQASELQRGFSN 1214
                  ..888888877777664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1260 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       802  (0.044732); expected 358.6 (0.02)
Passed bias filter:                      530  (0.029561); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.89u 0.36s 00:00:01.25 Elapsed: 00:00:00.49
# Mc/sec: 7693.69
//
Query:       EPX74372.1  [L=358]
Description: farnesyl pyrophosphate synthetase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.7e-72  242.5   0.0    4.6e-72  242.2   0.0    1.1  1  polyprenyl_synt  Polyprenyl synthetase


Domain annotation for each model (and alignments):
>> polyprenyl_synt  Polyprenyl synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  242.2   0.0   2.6e-76   4.6e-72       7     255 ..      54     310 ..      48     311 .. 0.91

  Alignments for each domain:
  == domain 1  score: 242.2 bits;  conditional E-value: 2.6e-76
                      HHHHHHHSSS--HHHHHHHHHHHHHS.CG..HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SEETTEE-HHHCTCHHHHHHHHHHHHHHHHHH CS
  polyprenyl_synt   7 aleylveagGKrlRpllvllaaealk.ee..eeelekaavlawivellhaasLvhDDimDdsetRRGqpcahrlvGnklAindgdfllarafel 97 
                      +l+ ++  gGK++R+l+v+ + + l  ++  e+e+++aa l+w +e+l+ ++L++DDimD+s+ RRG +c++r+vG+++A nd+ +l+a++  l
       EPX74372.1  54 SLQRNT-LGGKNNRSLCVVESLKSLLgRDlrENEFREAALLGWLIEILQGCFLMADDIMDNSTKRRGLECWYREVGVARAFNDSQLLEACIPLL 146
                      677888.9****************9964466779************************************************************ PP

                      HHHHH..STT.HHHHHHHHHHHHHHHHHHHHHH..HHTTTTTCCC.SHHHHHHHHHHHTH.HHCHHHHHHHHHHTTHHHHHH.HHHHHHHHHHH CS
  polyprenyl_synt  98 laklf..eks.lellelfsevllqtveGqlldl..eeekdddlskfsleeyleivkyKTa.ylfalpvalaallagasdeel.ealkdiglelG 184
                      l+k+   ++  +ellelf+ev++ t+ G+  dl  + ++   + +f +e+y  iv+yKTa y+f+lpv++a+ll+g  +e + ++ k++ + lG
       EPX74372.1 147 LRKFYknHPFyVELLELFREVTFLTELGEQKDLlsS-AEARRVFSFDFENYDFIVTYKTAfYSFYLPVKCALLLSGNLNEFAdATTKKLSKLLG 239
                      ***98665548*********************9743.4445555699*****************************64543348899******* PP

                      HHHHHHHHHHHHHS-HHHHSS-TSHHHHTT---HHHHHHHHCT-HHHHHHHHHHTT.SSHHHHHHHHHHHHH CS
  polyprenyl_synt 185 laFQiqDDylDlfgdpevlgKpagtDiqegkctlpilkalelaspeqrkvlkeilg.kkaekeedvkealel 255
                      ++FQ qDDylD+fgd ++lgK+ g Di+++kct+++++a   a+++q   l+ ++g +++++++++k+++++
       EPX74372.1 240 YYFQAQDDYLDCFGDYASLGKV-GMDIEDNKCTWLVCQAQMIANADQLMCLEMHYGrRNQDSVSKIKQLYRE 310
                      **********************.*********************************888999*******987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       537  (0.0299515); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2616.74
//
Query:       EPX74373.1  [L=405]
Description: histone deacetylase Clr6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.2e-84  282.3   0.2    6.7e-84  282.0   0.2    1.1  1  Hist_deacetyl  Histone deacetylase domain
  ------ inclusion threshold ------
      0.029   14.2   0.0      0.062   13.2   0.0    1.5  1  NIL            NIL domain
      0.083   12.3   0.0       0.19   11.1   0.0    1.5  1  DUF1256        Protein of unknown function (DUF1256)


Domain annotation for each model (and alignments):
>> Hist_deacetyl  Histone deacetylase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  282.0   0.2   1.1e-87   6.7e-84       1     306 [.      25     315 ..      25     316 .. 0.94

  Alignments for each domain:
  == domain 1  score: 282.0 bits;  conditional E-value: 1.1e-87
                    SCCGTHHHHHHHHHHHHT.THHHHCCE.EE-----HHHHTTTS-HHHHHHHHCHHHHCHHT.TTHCCHHHCCTSTSSSSSTHCTTTCCHHHHHHHH CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Hist_deacetyl   1 hpenpkRlsaileslaesvglldelelliqpseatkeellkvHskeYlelleslsnelkkkeeakekeleeiasklldddtpvspktlkaallavg 96 
                    hp++p+R++ + ++l  +++l +++  +i+p +at ++++++H++eY+++l++++ +  +k    +++  + +   + dd+pv++++++ +++++g
     EPX74373.1  25 HPMKPHRVR-MAHNLVVNYNLHEKMN-IITPVRATINDMTRCHTDEYIDFLHRVTPDTMEKF---QPHQLKFN---VGDDCPVFDGLYEFCSISAG 112
                    89*******.9999999999876655.7*************************998887776...33333333...5899**************** PP

                    HHHHHHHHHHTTSSSEEEETT.SS--TT-BTTB-BTTBSS-HHHHHHHHHHHCC-SS-EEEEE-SSS--HHHHHHCTT-TTEEEEEEEE-CCTSTT CS
                    xxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Hist_deacetyl  97 avleavdavlsgsvkaafvlv.rPpgHHakaseasGFClvNnvaiaikylqakhelkrvailDvDvHhGnGteeafysdpdvltlSiHryegifyP 191
                    +++ a++++ sg  +a+++++  ++ HHak++easGFC+vN++a+a+ +l + h  +rv+++D+DvHhG+G+ee+fy +++v+t+S+H++++ ++P
     EPX74373.1 113 GSIGAAQELNSG--NAEIAINwAGGLHHAKKREASGFCYVNDIALAALELLKYH--QRVLYIDIDVHHGDGVEEFFYTTDRVMTCSFHKFGE-YFP 203
                    ************..99999999****************************9944..6********************************865.9** PP

                    SS--TT---SGGGTTSEEEEEE-TT-BHHHHHHHHHHCHHHHHCCH--SEEEEEE-STTBTTSTT-S-BB-HHHHHHHHHHHCCCHGS-G.EEEEE CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Hist_deacetyl 192 gtgaledlgegkgkgfnlnvpleegtgdeeylkvfeeilrpvleefkPdlilvsaGfDalkgdplgelnlsvegykeltkklaeladkvkkvvlll 287
                    gtg+++d+g g gk++++nvpl++g++de+y +vf+ ++ ++++ f+P+++++++G+D+l+gd+lg +nls++g++++++ l++++    ++++++
     EPX74373.1 204 GTGHIKDTGIGVGKNYAVNVPLRDGINDESYESVFKPVVSHIMQWFRPEAVILQCGTDSLAGDRLGCFNLSMRGHASCVRFLKSFKV---PLICVG 296
                    *************************************************************************************98...99**** PP

                    -S---HHHHHHHHHHHHHH CS
                    xxxxxxxxxxxxxxxxxxx RF
  Hist_deacetyl 288 eGGYnlealaravtavlsa 306
                    +GGY+ +++ar +t+ + +
     EPX74373.1 297 GGGYTVRNVARVWTYETGI 315
                    **************99876 PP

>> NIL  NIL domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0     1e-05     0.062      10      54 ..     235     279 ..     233     290 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1e-05
                 -S-SS-HHHHHHHHHT-EEEEEEEEEEEETTEEEEEEEEEEES-H CS
         NIL  10 ksavePllshlvrqlglevnIlqGsveriqgtpfGqlvielsgsq 54 
                 +s+ +P++sh+++ +  e+ Ilq +++ ++g ++G + ++++g +
  EPX74373.1 235 ESVFKPVVSHIMQWFRPEAVILQCGTDSLAGDRLGCFNLSMRGHA 279
                 68899***********************************99844 PP

>> DUF1256  Protein of unknown function (DUF1256)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   3.2e-05      0.19       8      44 ..     232     269 ..     228     277 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 3.2e-05
     DUF1256   8 naleelsellsseikkv.keeivivciGtdrstgdsLg 44 
                 + +e++++ + s+i+++ + e vi+  Gtd + gd Lg
  EPX74373.1 232 ESYESVFKPVVSHIMQWfRPEAVILQCGTDSLAGDRLG 269
                 568899999999**999999*****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (405 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       507  (0.0282782); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.38
# Mc/sec: 3207.96
//
Query:       EPX74374.1  [L=351]
Description: cysteine synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-68  231.8   0.0    1.4e-68  231.5   0.0    1.0  1  PALP      Pyridoxal-phosphate dependent enzyme


Domain annotation for each model (and alignments):
>> PALP  Pyridoxal-phosphate dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  231.5   0.0   7.9e-73   1.4e-68       4     294 .]      20     316 ..      18     316 .. 0.93

  Alignments for each domain:
  == domain 1  score: 231.5 bits;  conditional E-value: 7.9e-73
                 CSSS--EEEECCTCCCCCCEEEEEEGGGSTTSBTTHHHHHHHHHHHHTT...TTTSEEEEEBSSHHHHHHHHHHHHHT-EEEEEEETTS-HHHHHHHHH CS
        PALP   4 gigpTPlvrlprlskelgvplflKlEslnptgSfKdRgaeyllarlkeg...tgaktvveassGNhgralAaaaallGlkvtivvpadaspekvallrl 99 
                 +ig+TPl+rl++lske+g+++++K E+ np+gS+KdR+a+y++ +++ +   +++ tvve+++GN+g++lA++a++ G++++i++p++ s+ k++ lr 
  EPX74374.1  20 AIGRTPLIRLESLSKETGCNILAKAEFQNPGGSVKDRAAYYVVRNAEMNgtlRRGGTVVEGTAGNTGIGLAHIARARGYRCVIYMPNTQSQNKIDTLRY 118
                 79*******************************************99999************************************************* PP

                 TT-EEEEECCH.HHHHHHH...HHHHHHHSTTCEE--TTTSHHHHHH.HHTHHHHHHHHTTTTEEEEEEE-SSSHHHHHHHHHHHH.HSTT-EEEEEEE CS
        PALP 100 lGaevvevggd.ydeavaa...aaelaaegegaylvsqfdnptvieg.ygtiglEileqlggkpdavvvpvGgGgliaGiaaglke.rrpdvrvigvep 192
                 lGaev  v+   y++ +++   a++ a+++++a++++qfdn+++ +  y+t+g+Ei+eq+ggk+d + +++G+Gg++aGi ++lke + + v  ++++p
  EPX74374.1 119 LGAEVFPVPAVaYTNPENYnhqARRHAESIPNAVWTDQFDNVANLQShYETTGPEIWEQTGGKVDGFTCSTGTGGTFAGITKFLKEkSEGRVSSFVADP 217
                 ********555555555554458889999*********************************************************66667******** PP

                 CTTCGGTTCCS..S.SS..B.SSS.CCSTCSCGTTCCHHHHSEEEEEEEEEEHHHHHHHHHHHHHHHSB-B-HHHHHHHHHHHHHHHHCCTTCEEEEEE CS
        PALP 193 egsdalarslragrrvtvpvsdtiadglavgspselafelldrlvdeivtvsdeealeamrllarregivvepssaaalaalklreagelkegdrvvvi 291
                  gs  + ++  +g+  +  +++++ +g++ g   + +++   +l+d++  ++de  + ++ +l  +egi+++ ss  ++ a+  ++a+ l++g+++v+i
  EPX74374.1 218 PGSVLYSHFKTKGEK-PDNSGSSFTEGIGQG-RITGNMQSTYGLIDDALRIPDELSINMLYRLLDEEGIFLGGSSTLNVVAA-VEMAKILGPGKTIVTI 313
                 *99999999966655.55556**********.777777888899*****************************999999999.9*************** PP

                 E-B CS
        PALP 292 ltg 294
                 l++
  EPX74374.1 314 LCD 316
                 *97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (351 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       275  (0.0153383); expected 358.6 (0.02)
Passed bias filter:                      259  (0.0144459); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2547.38
//
Query:       EPX74375.1  [L=727]
Description: ATP-dependent RNA helicase Dbp7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-46  158.4   0.0    3.5e-46  157.2   0.0    1.6  2  DEAD        DEAD/DEAH box helicase
    2.4e-24   85.8   0.2    1.5e-23   83.2   0.1    2.5  2  Helicase_C  Helicase conserved C-terminal domain
    2.8e-22   78.7   0.1    6.3e-22   77.6   0.1    1.6  1  DUF4217     Domain of unknown function (DUF4217)
      6e-11   42.6   0.2    1.3e-09   38.2   0.0    2.6  3  ResIII      Type III restriction enzyme, res subunit
  ------ inclusion threshold ------
      0.011   15.0   0.0      0.042   13.2   0.0    2.0  2  CMS1        U3-containing 90S pre-ribosomal complex subunit


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.2   0.0   9.8e-50   3.5e-46       1     176 []     168     360 ..     168     360 .. 0.91
   2 ?   -2.9   0.0       1.3   4.8e+03     127     157 ..     471     498 ..     459     516 .. 0.57

  Alignments for each domain:
  == domain 1  score: 157.2 bits;  conditional E-value: 9.8e-50
                 -HHHHHHHHHHHTT..CEEEEEESTTSSHHHHHHHHHHHHHHHS.....TTSTS-EEEEEESSHHHHHHHHHHHHHHTTT.ST..SEEEEEETTSSHHH CS
                 xxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xx..xxxxxxxxxxxxxx RF
        DEAD   1 tdiQaeaiplilgg..gdvlvaaeTGsGKTlaflipvlqivyet.....kgktgpkalivePtreLaeqtlnnlkkfkky.id..lrvlliiggvaard 89 
                 t+iQ +++p++l+g  +d +++aeTGsGKTla+l+p++q++++       +++g  a+iv+PtreL++q+++ +++++++ +   +  + +igg+++++
  EPX74375.1 168 TNIQNSCLPALLNGndRDAFIEAETGSGKTLAYLLPIIQRLIRLpyekrSRTSGLFAVIVAPTRELCQQIYTVANNLTNNrLAhwIVSCNVIGGEKKKS 266
                 78**********66448*************************99*998889999*************************764467777799******** PP

                 HHHHHHTTCSEEEEEHHHHHHHH.HCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTST.TT....SE.EEEEESSBSHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xx....xx.xxxxxxxxxxxxxxx RF
        DEAD  90 qlskldngvdivvgtpgrlddll.stgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgk.lq....rq.vivlSATlpkdvkkl 176
                 ++s++++gv+i++gtpgrl+d++ +t+ l+lsqvr++VlDE drl+d+gf+++i +il+ l+++++  +  +    r+  +++SAT++++v++l
  EPX74375.1 267 EKSRIRKGVNILIGTPGRLADHIeNTEALDLSQVRWVVLDEGDRLMDMGFEETITKILKYLDSQNSPYPlGDsmpsRKvNVLCSATIKDTVEQL 360
                 ***********************88999*********************************8887777744477764469********999875 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.3
                 EETHHHHHHTTTHHHHHHHHHHSHHHCTTST CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 127 lDEadrlldqgfsdfinrilnqlpqitcdgk 157
                 +D a+rl ++    ++ r++ +l+q+t +  
  EPX74375.1 471 VDTAHRLNNN---AKVYRLHGSLSQQTRTAT 498
                 4555555554...555555555554444433 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0         1   3.7e+03      20      62 ..     225     275 ..     205     307 .. 0.54
   2 !   83.2   0.1   4.2e-27   1.5e-23      26     111 .]     468     554 ..     408     554 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 1
                 EEEESSHHHHHH....HHHHHHHT....TSTEEEESTTSTHHHHHHHHHHH CS
  Helicase_C  20 lifvntidrlek....vklllekk....gikvavlhgelpqnereeileqf 62 
                 +i+++t++ +++    ++ l++++     +++ v+ ge +++e+ +i +  
  EPX74375.1 225 VIVAPTRELCQQiytvANNLTNNRlahwIVSCNVIGGEKKKSEKSRIRKGV 275
                 666666665554433433332222444446666666666666665554443 PP

  == domain 2  score: 83.2 bits;  conditional E-value: 4.2e-27
                 HHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH..TTSSS.EEEESGGGTSSSTSTTESEEEESSSSSSHHHHHHHHTTSSSTT CS
  Helicase_C  26 idrlekvklllekkgikvavlhgelpqnereeileqfn..kgesd.vLiatdvaerGidipkvnlVinfdlprnvtsyiqriGRtgRag 111
                  + ++ ++ l  +++ kv +lhg+l+q+ r ++l+qf   k+++  +L++tdva+rG+d+p+++lV+++d+p+++++y +riGRt+Rag
  EPX74375.1 468 EQAVDTAHRL--NNNAKVYRLHGSLSQQTRTATLSQFSseKNNFPrILLCTDVAARGLDLPNIDLVVQYDAPFSTDDYLHRIGRTARAG 554
                 3344434555..779**********************977788999*****************************************97 PP

>> DUF4217  Domain of unknown function (DUF4217)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.6   0.1   1.8e-25   6.3e-22       1      59 [.     617     677 ..     617     678 .. 0.98

  Alignments for each domain:
  == domain 1  score: 77.6 bits;  conditional E-value: 1.8e-25
     DUF4217   1 iqqkleslcakdrdlkelAqkAfvsyvraYsvhlake..iFrvkkLdlealAksfGLleaP 59 
                 +q +le+++++d +lke A+kAf syvraY++hl++e  iF++++L+l+++Aksf+L+eaP
  EPX74375.1 617 WQLELERMILEDSELKEIAKKAFSSYVRAYATHLSSErsIFNMRDLHLGHIAKSFALREAP 677
                 5899********************************************************9 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       2.4   8.5e+03      60      89 ..      53      83 ..      52     115 .. 0.61
   2 !   38.2   0.0   3.8e-13   1.3e-09      22     159 ..     181     329 ..     151     355 .. 0.85
   3 ?    1.3   0.2     0.083     3e+02      98     151 ..     429     484 ..     376     508 .. 0.64

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 2.4
                EESSHHHHHHHHHHGGGGTGG.....GEEEE CS
      ResIII 60 lvprkslleqtleefkkflseayke.igkkv 89
                l+ rk + +q +e++ ++ ++++ + i ++v
  EPX74375.1 53 LAERKPIKSQRKENIPSMHESKRRKsIPGSV 83
                6778888888888887777776655533333 PP

  == domain 2  score: 38.2 bits;  conditional E-value: 3.8e-13
                 .TTSEEEEEESTTSTHHHHH.HHHHHHH-S............-EEEEESSHHHHHHHHHHGGGGTGG.......GEEEESSS-B--........-SEEE CS
      ResIII  22 krdkrglikmaTGtGKTlva.aklierllkkgkee.......kflflvprkslleqtleefkkflseayke...igkkvsgdkkka.kekdstnkkilv 108
                  +d+ ++i+++TG+GKTl + + +i+rl +  +e+        +++++p+++l++q ++  ++++++  +     ++++ g+kkk+ k++ ++  +il+
  EPX74375.1 181 GNDRDAFIEAETGSGKTLAYlLPIIQRLIRLPYEKrsrtsglFAVIVAPTRELCQQIYTVANNLTNNRLAHwivSCNVIGGEKKKSeKSRIRKGVNILI 279
                 5778999*************999*******9999999999999999************999999999887799988888888888877778999***** PP

                 EEHHHHHHTH........HHHTTT-SEEEEETGGGTTS....TTTHHHHHT--- CS
      ResIII 109 ttiqsldadseeeeeeseellrdrfdviiiDEaHrlgak...kswreilekfke 159
                  t  +l  ++    e++e l+ ++   ++ DE  rl ++   +++++il+++++
  EPX74375.1 280 GTPGRLADHI----ENTEALDLSQVRWVVLDEGDRLMDMgfeETITKILKYLDS 329
                 **********....788888999999************9776688889888764 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.083
                 ......-SEEEEEHHHHHHTH..........HHHTTT-SEEEEETGGGTTS.TTTH CS
      ResIII  98 ekdstnkkilvttiqsldadseee..eeeseellrdrfdviiiDEaHrlgakkswr 151
                  + +++ +++++   +++a+se+e   +e++ ++ +++    +D aHrl+ ++++ 
  EPX74375.1 429 LSCADSVNFHFEAFRRVQAKSENEleVKEDDANKISTSSEQAVDTAHRLNNNAKVY 484
                 44455556666666666666655554222222222223344457777777654433 PP

>> CMS1  U3-containing 90S pre-ribosomal complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.2e-05     0.042     178     209 ..     275     307 ..     264     348 .. 0.82
   2 ?   -3.2   0.0       1.2   4.3e+03     117     142 ..     499     525 ..     488     528 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.2e-05
        CMS1 178 igiavGtpgRildLl.eeeslsvdeLkrivlDa 209
                 + i +GtpgR++d + ++e+l +++++ +vlD 
  EPX74375.1 275 VNILIGTPGRLADHIeNTEALDLSQVRWVVLDE 307
                 67889**********778*************96 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.2
        CMS1 117 lvk.saksngsPelLvltlaalRaaDl 142
                 l++ s++ n  P++L+ t  a R  Dl
  EPX74375.1 499 LSQfSSEKNNFPRILLCTDVAARGLDL 525
                 55524566788*******999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (727 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       860  (0.047967); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.66u 0.30s 00:00:00.96 Elapsed: 00:00:00.46
# Mc/sec: 4705.81
//
Query:       EPX74376.1  [L=216]
Description: SAGA complex/transcription factor TFIID complex subunit Taf10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.6e-24   83.6   0.1    1.1e-23   82.9   0.1    1.4  1  TFIID_30kDa      Transcription initiation factor TFIID 23-30k
  ------ inclusion threshold ------
       0.16   12.5   2.5       0.24   12.0   0.0    2.2  2  FoP_duplication  C-terminal duplication domain of Friend of P


Domain annotation for each model (and alignments):
>> TFIID_30kDa  Transcription initiation factor TFIID 23-30kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.9   0.1   1.2e-27   1.1e-23       1      50 []     107     156 ..     107     156 .. 0.99

  Alignments for each domain:
  == domain 1  score: 82.9 bits;  conditional E-value: 1.2e-27
  TFIID_30kDa   1 PiIPDavtayyLekaGletsDprlarlvsLaaqKFisdiaadAyqyskir 50 
                  PiIPD + +yyL+ +G+++ D rl++l+ LaaqKFisdia+dAyqyskir
   EPX74376.1 107 PIIPDVLLDYYLSLSGFRCADSRLKKLLGLAAQKFISDIAQDAYQYSKIR 156
                  9************************************************8 PP

>> FoP_duplication  C-terminal duplication domain of Friend of PRMT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.8      0.22     2e+03      41      59 ..      87     105 ..      39     107 .. 0.59
   2 ?   12.0   0.0   2.6e-05      0.24      12      59 ..     158     205 ..     152     212 .. 0.78

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.22
  FoP_duplication  41 rkkkkpltkeeLDaeLDaY 59 
                      r+ +k++t  e  +e+D+Y
       EPX74376.1  87 RDMAKNKTLQEFMNEMDDY 105
                      5555666666666777776 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 2.6e-05
  FoP_duplication  12 ggrggrrgrgrggrggrggrgrgrggrggrkkkkpltkeeLDaeLDaY 59 
                      g+ +++ ++++  + g  g+++g  +r+g + k  lt ++L  +L++Y
       EPX74376.1 158 GSSSTSSTGFNVPNYGAAGASAGGPTRRGDRGKAVLTVDDLSSALNEY 205
                      556666677777777777777777777777888*************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       680  (0.0379274); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.28s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 1490.47
//
Query:       EPX74377.1  [L=591]
Description: transcription factor tfiiic complex subunit sfc6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (591 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       539  (0.030063); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 4155.74
//
Query:       EPX74378.1  [L=200]
Description: inositol metabolism protein Opi10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-57  193.0   0.1    5.7e-57  192.5   0.1    1.2  1  DUF775    Protein of unknown function (DUF775)


Domain annotation for each model (and alignments):
>> DUF775  Protein of unknown function (DUF775)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  192.5   0.1   3.2e-61   5.7e-57       1     199 []       1     194 [.       1     194 [. 0.91

  Alignments for each domain:
  == domain 1  score: 192.5 bits;  conditional E-value: 3.2e-61
      DUF775   1 mFgvivagrpvqtelqqvsetkfvfslpkaksishivvFllpnvtlpegtaaavYlqlpekeefklLGalsneKpSAifkvknekssseaesaseassa 99 
                 mFg+i+agr+vqt+lqqv e++fvf+l+ a+s++hivvFllp++++ +g++a vY+q+p  ++f++LG+l+n+KpSAif++kn+ +s       ++  +
  EPX74378.1   1 MFGAICAGRLVQTNLQQVAENQFVFQLDFAESLNHIVVFLLPTAPFAPGMGAKVYFQWP-GKTFQFLGYLTNDKPSAIFRLKNTIQSL------SNDMP 92 
                 9*********************************************************9.679*********************9994......44557 PP

      DUF775 100 eesstltiGisiEpleqvaaqlaelkaeqsassssaassskseessaavtkelaqkiiknafnylaSFadka.............geevvplkafekWw 185
                     t+++Gis+Ep+ +  +  a   a++sa ++               t+++aq+i++n++n+laSFa+++             +++++pl++f++W+
  EPX74378.1  93 CIGVTAILGISVEPTVNFVESPAGEAAATSAIAKP-----------LPPTTSIAQRILRNLYNFLASFATSNlppnalglgdirpNDTYIPLRVFQDWH 180
                 8899***********99888777766666544432...........223899******************55789************************ PP

      DUF775 186 ekFerklendpnFl 199
                 +kF  k++n+pnFl
  EPX74378.1 181 TKFLAKINNNPNFL 194
                 *************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       377  (0.0210274); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.21s 00:00:00.59 Elapsed: 00:00:00.35
# Mc/sec: 1694.05
//
Query:       EPX74379.1  [L=216]
Description: imidazoleglycerol phosphate dehydratase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-59  199.6   0.1      4e-59  199.0   0.1    1.3  1  IGPD      Imidazoleglycerol-phosphate dehydratase
  ------ inclusion threshold ------
       0.12   12.2   0.0       0.24   11.3   0.0    1.4  1  DUF3277   Protein of unknown function (DUF3277)


Domain annotation for each model (and alignments):
>> IGPD  Imidazoleglycerol-phosphate dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  199.0   0.1   4.5e-63     4e-59       1     144 []      54     197 ..      54     197 .. 1.00

  Alignments for each domain:
  == domain 1  score: 199.0 bits;  conditional E-value: 4.5e-63
                 ....HHHHHHHHHHHHHT--EEEEEEESSH...HHHHHHHHHHHHHHHHHHS..-SSB--EEEEEEEETTEEEEEEEE--SS-EEE--..-SB--TT.- CS
        IGPD   1 TgigfldhmLdqlakhggfdlkvkvkgdlevddHhtvedvgialGqalkealgdkrgikRfgsallpmDealaevaldlsgrpylvleaelkrekigel 99 
                 Tgigfldhm ++lakh+g++l++  +gdl +ddHht ed++ialG a+k+a+g+ +g+kRfg+a++p+Deal+++++dlsgrpy v++  lkrekigel
  EPX74379.1  54 TGIGFLDHMYHALAKHSGWSLRLYSRGDLVIDDHHTAEDTAIALGMAFKKAMGNFAGVKRFGHAYCPLDEALSRAVVDLSGRPYSVIDLGLKREKIGEL 152
                 9************************************************************************************************** PP

                 -HHHHHHHHHHHHHHHT-EEEEEEEE--BHHHHHHHHHHHHHHHH CS
        IGPD 100 dtelveeffeslaeaagitlhvkvlrgenahhivealfKafaraL 144
                 ++e+v+++++s+a++agitlh+++l+g+n+hh +e++fK+fa aL
  EPX74379.1 153 SCEMVPHLLNSFATSAGITLHISCLYGNNDHHRTESAFKSFAVAL 197
                 *******************************************98 PP

>> DUF3277  Protein of unknown function (DUF3277)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   2.7e-05      0.24      51     118 ..      35     104 ..       6     107 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 2.7e-05
     DUF3277  51 evmhslhagksGtitirllktspvnkkLqalyna....qslssaewgsnvitirnta.agdvivarsvafrke 118
                 ev+ s+ha+++G+ ti++     +   L  +y+a       s  ++++  ++i +++ a d+++a ++af+k+
  EPX74379.1  35 EVITSKHANQKGEQTIQVDTGIGF---LDHMYHAlakhSGWSLRLYSRGDLVIDDHHtAEDTAIALGMAFKKA 104
                 89***************9877654...4444444210244556789999999998762579*********996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       275  (0.0153383); expected 358.6 (0.02)
Passed bias filter:                      256  (0.0142785); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1555.83
//
Query:       EPX74380.1  [L=288]
Description: short chain dehydrogenase DHRS family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.4e-22   77.8   0.0      1e-21   77.3   0.0    1.1  1  adh_short      short chain dehydrogenase
      5e-14   52.4   0.0    7.4e-14   51.9   0.0    1.2  1  adh_short_C2   Enoyl-(Acyl carrier protein) reductase
    2.3e-05   24.0   0.0      4e-05   23.2   0.0    1.5  1  Epimerase      NAD dependent epimerase/dehydratase family
    6.5e-05   22.9   0.3    0.00042   20.3   0.4    1.9  1  KR             KR domain
    0.00084   18.4   0.0     0.0011   18.0   0.0    1.4  1  3Beta_HSD      3-beta hydroxysteroid dehydrogenase/isomerase 
     0.0037   16.4   0.0     0.0051   16.0   0.0    1.2  1  RmlD_sub_bind  RmlD substrate binding domain


Domain annotation for each model (and alignments):
>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.3   0.0   3.3e-25     1e-21       3     191 ..      40     224 ..      39     228 .. 0.94

  Alignments for each domain:
  == domain 1  score: 77.3 bits;  conditional E-value: 3.3e-25
                 EEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHTTSEEEEEE-TTTSHHHHHHHHHHHHHHHSSESEEEE---SS--SSGGGCSHHHH CS
   adh_short   3 vlvtGassGIGraiakelakeGakvvvvdrseekleevakelkeegakalaiqvDvtdreevealvekavkklgkldvLvnNAGitgsgpfselseeew 101
                 +++tG+ + +Gr +  + ++ G  v+ +d + ++     + + +    +++i +D+t++e+++++++k +    k  +L+n  +i+ ++   ++s+++ 
  EPX74380.1  40 IVITGGNGVLGRSLISQAINIGLLVISLDVEYSPD--FFQDIPD----VIPIVCDITEEESINNFLKKLETIRAKPFALINAGAIAPKNRLFDMSSKQL 132
                 89************************999987765..9999997....9*********************999999*****999999999********* PP

                 HHHHHHHTHHHHHHHHHHHHHHHHCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGT..EEEEEEEESSBSSHHHHHHC CS
   adh_short 102 ervievNltgvflltravlpamlkqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptg..irvnavaPGlvdTdmakelr 191
                  r+i+vN  g f++t++++p +  + + +I+nv+S  +  +  gvaaYs+sKaa+ +l ++l  e ++    i+ +    G +++ m  + +
  EPX74380.1 133 ARCIHVNTIGQFNITKMLYPSLFLSVEPHIINVTSALAYFSASGVAAYSCSKAALLSLHETLEVETRQMHvpIKLSLYSLGQFKSTMFDKDT 224
                 *********************************************************************98888889999999988877655 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.9   0.0   2.5e-17   7.4e-14      43     158 ..      81     197 ..      55     206 .. 0.91

  Alignments for each domain:
  == domain 1  score: 51.9 bits;  conditional E-value: 2.5e-17
                   SEE.EE--TTSHHHHHHHHHHHHHHHSSEEEEEE-----EGCSS-GGGH-HHHHHHHHHHHTHHHHHHHHHHHH..HCTSCCEEEEEEEGGGTSBST CS
  adh_short_C2  43 aev.lecDVtdeeqvealveevvekfgklDilvnnagiapklkgpfletsreefdraldvnlyslfllakaalp..lmkeggsivnlssvgaervvp 136
                     + + cD+t+ee+++++ ++++    k   l+n+ +iapk  +++ ++s ++++r ++vn+ + f+++k + p   +  +  i+n++s  a  + +
    EPX74380.1  81 DVIpIVCDITEEESINNFLKKLETIRAKPFALINAGAIAPK--NRLFDMSSKQLARCIHVNTIGQFNITKMLYPslFLSVEPHIINVTSALAYFSAS 175
                   445799***********************************..*******************************9556666**************** PP

                   TTTHHHHHHHHHHHHHHHHHHH CS
  adh_short_C2 137 nynaygaaKaalealtrylAve 158
                   + +ay+ +Kaal +l  +l ve
    EPX74380.1 176 GVAAYSCSKAALLSLHETLEVE 197
                   **************98887666 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.0   1.3e-08     4e-05       1     102 [.      40     150 ..      40     203 .. 0.84

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 1.3e-08
                 EEEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHCEEEE--TT-HHHHHHHHHH.....HT-SEEEE--S---HHH....HHHSHHHHHHH CS
   Epimerase   1 ilVtGatGfiGsalvkallekgyevigldrlssasntarledlelveldltdrsalerlfke.....eqpdavihlAavggvaa....ssedpadfiek 90 
                 i++tG++G +G+ l+ +  + g  vi ld + s + ++ ++d+  + +d+t+++++++++k+      +p a i+++a++  ++    ss++ a++i+ 
  EPX74380.1  40 IVITGGNGVLGRSLISQAINIGLLVISLDVEYSPDFFQDIPDVIPIVCDITEEESINNFLKKletirAKPFALINAGAIAPKNRlfdmSSKQLARCIHV 138
                 89********************************************************99963333247889999988655443233388899999999 PP

                 HTHHHHHHHHHH CS
   Epimerase  91 nlqgtlnlleaa 102
                 n++g+ n+ +++
  EPX74380.1 139 NTIGQFNITKML 150
                 999999998876 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.4   1.4e-07   0.00042       1     159 [.      38     190 ..      38     203 .. 0.85

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 1.4e-07
                 SEEEEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHTT-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE---------TTT CS
          KR   1 gtylitGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaelealgaevevvaaDvsdkdavealleeikaeeppikGvihaAgvlrdkllee 99 
                 g+ +itGG G LG++l+ + ++ g   l+++s +    e s ++++ +     +v  + +D+++++++++ l+++++  ++    i+a  ++ ++ l +
  EPX74380.1  38 GSIVITGGNGVLGRSLISQAINIG---LLVISLDV---EYSPDFFQDIP----DVIPIVCDITEEESINNFLKKLETIRAKPFALINAGAIAPKNRLFD 126
                 6889***********998888777...78888884...34445666665....599********************9998888899999999******* PP

                 --HHHHHHHHTTTTHHHHHHHHHTTT....S--SEEEEEEEHHHHH--TT-HHHHHHHHHHHHH CS
          KR 100 mtaedleqvlapKvkGawnLhelled....esldffvlfSSiagllgsagqanYaaaNaflDal 159
                 m++++l+++++    G  n+ ++l +    +   +++ ++S+ + + + g a+Y++  a l +l
  EPX74380.1 127 MSSKQLARCIHVNTIGQFNITKMLYPslflSVEPHIINVTSALAYFSASGVAAYSCSKAALLSL 190
                 **********************99987774444589999***************9988877665 PP

>> 3Beta_HSD  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   3.8e-07    0.0011       1      68 [.      41     103 ..      41     203 .. 0.89

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 3.8e-07
   3Beta_HSD   1 vvtGgaGFlGralvkeLvrleelkevrvlDlrespelleelskvnvkkviegDvtdkdkleealegvd 68 
                 v+tGg G lGr+l+++ ++++    v +lD++ sp   +++   +v+  i +D+t+++++++ l++ +
  EPX74380.1  41 VITGGNGVLGRSLISQAINIGL--LVISLDVEYSPDFFQDIP--DVI-PIVCDITEEESINNFLKKLE 103
                 79*******************4..7899*******9944443..344.89***********9988765 PP

>> RmlD_sub_bind  RmlD substrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   1.7e-06    0.0051       3      60 ..      40     117 ..      38     149 .. 0.83

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.7e-06
                    EEEESTTSHHHHHHHHHCTTTSEEEEEE-TT...............T--TTSHHHHHHHH.....HHH--SEEEE--- CS
  RmlD_sub_bind   3 ilvtGanGqlGseLakqlaeeglevlaltre...............eldltdaeavaell.....keakpdvvvnaAA 60 
                    i++tG+nG lG+ L+ q+ + gl v++l+ e                +d+t++e+++++l       akp +++na+A
     EPX74380.1  40 IVITGGNGVLGRSLISQAINIGLLVISLDVEyspdffqdipdvipiVCDITEEESINNFLkkletIRAKPFALINAGA 117
                    89****************************9****************************9333332346778888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       398  (0.0221987); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2045.54
//
Query:       EPX74381.1  [L=1026]
Description: WD repeat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.067   12.8   0.1        0.2   11.3   0.0    1.8  2  Ilm1      Increased loss of mitochondrial DNA protein 1


Domain annotation for each model (and alignments):
>> Ilm1  Increased loss of mitochondrial DNA protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   1.1e-05       0.2      30     111 ..      38     122 ..      34     214 .. 0.81
   2 ?   -3.5   0.1      0.39     7e+03       4      21 ..     246     263 ..     216     267 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 1.1e-05
        Ilm1  30 dqelvyllgealridaarsfskpssp.lAflgvlLlvlalvDlvllslneelavaeywgrqaplRlllff..ivslyiYlssess 111
                 +q lv+ ++e+  +d+++ +   ++p  ++l   + v ++vDlv+lsl+e   + + + ++  +R+ + +   + l+ Yl +++ 
  EPX74381.1  38 GQVLVFTIRENGDLDYTERLLYHKHPiSSLLCFPFEVDGFVDLVILSLDESGLLCQWLLKSCKCRAKIQLydGLCLQLYLLDPNY 122
                 789*************988776665516789999*****************9999999999888876544116788888877765 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 0.39
        Ilm1   4 ktlirslalfhltlavyl 21 
                   li++  +f +tl+ +l
  EPX74381.1 246 VLLIKTGVIFLFTLSEML 263
                 444555555555555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1026 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       579  (0.032294); expected 358.6 (0.02)
Passed bias filter:                      405  (0.0225891); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.68u 0.28s 00:00:00.96 Elapsed: 00:00:00.43
# Mc/sec: 7192.43
//
Query:       EPX74382.1  [L=722]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.3e-34  116.7   0.3    1.2e-33  115.9   0.3    1.5  1  DUF2433        Protein of unknown function (DUF2433)
  ------ inclusion threshold ------
       0.12   12.5   0.0       0.31   11.2   0.0    1.7  1  Metallophos_2  Calcineurin-like phosphoesterase superfamily d


Domain annotation for each model (and alignments):
>> DUF2433  Protein of unknown function (DUF2433)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.9   0.3   1.3e-37   1.2e-33       1     124 []     291     408 ..     291     408 .. 0.95

  Alignments for each domain:
  == domain 1  score: 115.9 bits;  conditional E-value: 1.3e-37
     DUF2433   1 YgssyNefsvnpsleayrsklakskakfaevwetvkkeveaaideaqrklLenalevvekiPtiakeeakkneastskekeesafknlWnfNLcDaayg 99 
                 Yg syNefsvnp+ e+y +kl++ +a+f+evwetvk+eve +++++q++l +n+  +v ++P ++++       + +++   +a knlWnfNL Da++g
  EPX74382.1 291 YGASYNEFSVNPNPEHYLQKLSAGRAQFMEVWETVKSEVERMVTPDQQHLVNNVTRLVSRMPDATNS------YAMNNMLPGTALKNLWNFNLLDASFG 383
                 9**************************************************************9993......3445667889**************** PP

     DUF2433 100 slvldikegrigaelrsqGfnfayr 124
                 + vl +++g+++ e +s Gfn++yr
  EPX74382.1 384 WNVLVVENGHVQVESKSFGFNLGYR 408
                 **********************998 PP

>> Metallophos_2  Calcineurin-like phosphoesterase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   3.5e-05      0.31       2      42 ..      50      91 ..      50     187 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 3.5e-05
  Metallophos_2  2 klaiiSDlHsnldaleavlealkevgvdaiihaGDl....eeeep 42
                   +l+ i+D++++l+++++++e+  ++  d +ih+GD+      + p
     EPX74382.1 50 RLLCIADVRGELSLINKLAEE-TRA--DCVIHTGDFgffeRSSLP 91
                   5789**************999.555..9*******7544222333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (722 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       587  (0.0327403); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.26s 00:00:00.87 Elapsed: 00:00:00.41
# Mc/sec: 5327.68
//
Query:       EPX74383.1  [L=625]
Description: type II protein arginine N-methyltransferase Skb1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.5e-63  211.5   0.0    1.1e-62  210.9   0.0    1.2  1  PRMT5      PRMT5 arginine-N-methyltransferase
    5.5e-61  206.0   0.0    8.8e-61  205.3   0.0    1.3  1  PRMT5_TIM  PRMT5 TIM barrel domain
    1.6e-58  197.5   2.3    2.5e-58  196.9   2.3    1.2  1  PRMT5_C    PRMT5 oligomerisation domain


Domain annotation for each model (and alignments):
>> PRMT5  PRMT5 arginine-N-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  210.9   0.0   1.9e-66   1.1e-62       4     173 .]     270     432 ..     268     432 .. 0.96

  Alignments for each domain:
  == domain 1  score: 210.9 bits;  conditional E-value: 1.9e-66
                 HHHSCCGBT-EEEE--TTTS---HHHHHHHCC-CCHHHHHHHHHHHHHHHHCTCCGTCC.-EEEEEEES-TTSHHHHHHHHHHHHHCCCEEEEEEEES- CS
       PRMT5   4 ekleseyedvlqapLqPlsdnLesatYevFEkdkvKYelYeeAiekalsdlkkekkkksekklvilvvGaGRGplvdralkaleetkvtkvkivavEKn 102
                 e+++ +y+d+lq+pLqPls+nLe++tYe+FE+d+vKY++Ye+Ai +al+d+ +++       + i+vvGaGRGplvd+al+a+ ++  ++v+++a+EKn
  EPX74383.1 270 EEFAGGYKDYLQIPLQPLSHNLENITYEIFERDPVKYAQYEQAIFSALNDRDEAS------VTRIAVVGAGRGPLVDCALRAAISSA-RTVDMIALEKN 361
                 678889*******************************************988765......3579*******************999.9********** PP

                 HHHHHHHHHHHHHHTTCCGCEEEES-CCCCCHCC-ECEEEE---BTTBCCCSHHHHHHCCGGGCECC.EEEE CS
       PRMT5 103 pnavvtLqkkvneekWeekveviksdmrelkaeekvdllvsELLGSfgdnELsPEcldgvqkflkee.gisi 173
                 pna+ +L  + n ++W+ kv+++  dmre++ + k+d+lvsELLGS++dnELsPEcldgvq++l+++ gisi
  EPX74383.1 362 PNAFAMLLLR-NRQDWAGKVSLVFGDMREWNPDYKIDILVSELLGSMADNELSPECLDGVQRVLNPHnGISI 432
                 *******999.99****************************************************9999997 PP

>> PRMT5_TIM  PRMT5 TIM barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  205.3   0.0   1.5e-64   8.8e-61       1     255 [.      24     261 ..      24     262 .. 0.97

  Alignments for each domain:
  == domain 1  score: 205.3 bits;  conditional E-value: 1.5e-64
                 T-SEEEEETT-CCHHT-..SSSTTCCC--S-SS--CCCS-HHHHHHHEEEE--TT--TT-SSHHHHHHHHHHHHHHHHHHHHHT-SEEEEE--SS..-- CS
   PRMT5_TIM   1 gydfvvlpltnarfkdekkdeeadaerrvppltrsdvvlspsdwsqsviglisewidldsedeeirkdsekvLkkelayaaylglralilpgpslrekl 99 
                 gydfv + l +++ k++   e  ++ ++v+++ +s++  +p++++++v+gl+sewi+lds++  i+++se++L+ke+++a+y+gl +++ +gp+  +++
  EPX74383.1  24 GYDFVGVRLSTDALKQR--VESLEPFENVQEFLDSEIDYHPEEHVNKVVGLTSEWIELDSNNALIAQRSEEILMKEVSFASYCGLASVVCNGPKIADNI 120
                 79***************..9999**************************************************************************** PP

                 HHHHHHHHHHHCCSSS-EEEEEEESSGGGCTT-STCTTS----SCCGHHHHHHHHHHHHTTT-TCEEEECC--.CCGTSHHHHCCCCCTTEEEEEEECG CS
   PRMT5_TIM 100 anyaraissalesanavtisisiplaedkeleeeeetlanalegdllstWelWntirtlcgyssrLsVaLeLp.kelpskeelerWlaEPvkliilsas 197
                  +yar  s  l s  ++++++++p+ + +e              dl+++W++Wn +rt+c+y++rL++aLeLp +  p +e ++rW+aEP+++i+ls  
  EPX74383.1 121 MQYARSCSMILDSSFNINLLLQFPIESGNE--------------DLFENWKMWNLVRTACKYNPRLQLALELPpSCSPPIELVNRWYAEPIDMITLSCM 205
                 *************************99974..............9****************************************************** PP

                 G-EESTTT-EE--HHHHHHHHHHHHTT-EEEEESSSTTTTTCCCHCHHHHHHHHHHHH CS
   PRMT5_TIM 198 iFltnkkgypvLskahqallkeffklnvkiiLsgvekkaksskgdvkaylkyikyllk 255
                 +F++n  gypvLs++++a+ + ++++n+k++L +  +    + g+  +y  y+k+l+ 
  EPX74383.1 206 AFVPNPTGYPVLSRKLRAIFSLYIRKNPKVFLRD--SDFPDKIGESPDYSIYMKHLFD 261
                 **********************************..555556688999********96 PP

>> PRMT5_C  PRMT5 oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  196.9   2.3   4.1e-62   2.5e-58       1     176 [.     435     621 ..     435     622 .. 0.97

  Alignments for each domain:
  == domain 1  score: 196.9 bits;  conditional E-value: 4.1e-62
                 EEEEEEEEEE-HHHHHHHHT...-HHHCS-EEEB--S-EESSS....S-EEEEEEESS-TTSS......-S-EEEEEEEEE-SSEEEEEEEEEEEEEEE CS
     PRMT5_C   1 sytsyiaPisapklyqklks...ekaletpyvvklvkvdklse....kvkevweFehpneeke.....eenersktlefkikekaeihGlagyFeavLY 87 
                 sytsyi+Pi++pkl++++++    +a+ ++yvv +++vd+l+     +++++w+F+hpn+e++     ++n+rs+  +f++++ + +hG+agyFea LY
  EPX74383.1 435 SYTSYITPIMSPKLWSEVRNmndASAFARQYVVLMNSVDFLAPndefRFQPLWSFHHPNNETKlftknQHNRRSAAASFQATNPGILHGFAGYFEAILY 533
                 7*******************8766899***************999999**************99*9999****************************** PP

                 TTEEEE-SCCC...--TT-TS---EEEEEEEEEEE-TTEEEEEEEEEEEESSEEEEEEEEEECSTTS-E........---BSGGGSS-- CS
     PRMT5_C  88 kdvelSilPetkeaktkdliSWfpiffPlkkpllvkddselevslwRktdekkvWYEWsvesfvylvlshvrvkvgvselhnvngrays 176
                 k+++lS+lP+t+e+k++d++SWfp+++P++kp++++++s+l+v+lwR+td  +vW+EWs +++  l + + +++++++e+hn +gr +s
  EPX74383.1 534 KNISLSTLPTTMEEKSPDMFSWFPMYIPIEKPMYIPENSQLQVHLWRMTDGVRVWFEWSANTYLILRN-GSQIHLSSTEIHNASGRGFS 621
                 ****************************************************************9665.99**************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (625 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       419  (0.02337); expected 358.6 (0.02)
Passed bias filter:                      407  (0.0227007); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.31s 00:00:00.88 Elapsed: 00:00:00.46
# Mc/sec: 4099.08
//
Query:       EPX74384.1  [L=735]
Description: ATP-dependent RNA helicase Prp43 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.3e-21   76.7   0.4    6.8e-21   74.4   0.1    2.4  2  OB_NTP_bind  Oligonucleotide/oligosaccharide-binding (OB)-fol
    1.6e-19   70.2   0.0    3.2e-19   69.2   0.0    1.5  1  HA2          Helicase associated domain (HA2)
    5.6e-12   46.0   0.0    1.3e-11   44.8   0.0    1.6  1  Helicase_C   Helicase conserved C-terminal domain
    3.9e-10   39.8   0.0    8.1e-10   38.7   0.0    1.6  1  DEAD         DEAD/DEAH box helicase
    3.7e-07   30.5   0.1    3.9e-06   27.2   0.0    2.5  2  AAA_22       AAA domain
    5.9e-05   22.8   0.1    0.00043   20.0   0.0    2.4  2  SRP54        SRP54-type protein, GTPase domain
      0.002   18.1   0.0       0.59   10.1   0.0    2.4  2  ResIII       Type III restriction enzyme, res subunit
     0.0064   16.8   0.0      0.013   15.9   0.0    1.5  1  AAA_19       AAA domain
  ------ inclusion threshold ------
      0.012   15.3   0.0       0.02   14.6   0.0    1.3  1  AAA_30       AAA domain
       0.02   15.4   0.0       0.05   14.1   0.0    1.7  1  AAA_23       AAA domain
      0.031   13.5   0.0      0.058   12.6   0.0    1.4  1  DUF2075      Uncharacterized conserved protein (DUF2075)
      0.041   13.4   0.1       0.18   11.3   0.0    2.1  3  AAA_7        P-loop containing dynein motor region
      0.044   13.8   0.1      0.082   12.9   0.1    1.4  1  Flavi_DEAD   Flavivirus DEAD domain
      0.053   12.6   0.0        0.1   11.6   0.0    1.4  1  T2SSE        Type II/IV secretion system protein


Domain annotation for each model (and alignments):
>> OB_NTP_bind  Oligonucleotide/oligosaccharide-binding (OB)-fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       5.3   6.8e+03       5      21 ..     208     224 ..     208     280 .. 0.65
   2 !   74.4   0.1   5.3e-24   6.8e-21       1      83 []     626     703 ..     626     703 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 5.3
                  HHHHHTTCEEEEEETTC CS
  OB_NTP_bind   5 llaGlypqiarkdpskk 21 
                  +l+Gl  +ia++ p  k
   EPX74384.1 208 ILMGLMKRIAQRRPDLK 224
                  67899999997665433 PP

  == domain 2  score: 74.4 bits;  conditional E-value: 5.3e-24
                  HHHHHHHHHTTCEEEEEETTCCEEETTTCEEEEE-TTSTTTTT...TSSSEEEEEEEEESSSEEEEEEEEE-HHHHHHHSTTT CS
  OB_NTP_bind   1 lraillaGlypqiarkdpskkdyktartktrvfihpsSvlaknekekepewvvytelvettklylrdltaidpawLllfagqi 83 
                  +r++l++G+++q+a+k  ++k+y t+++++ v++hps+ l+      +pewvvy+e+v ttk ++r+++ ++p+wL+++a+++
   EPX74384.1 626 IRRALVSGFFMQVAKKSANGKSYVTMKDNQMVSLHPSCGLS-----VTPEWVVYNEFVLTTKSFIRTVSSVRPEWLVELAPSY 703
                  799**************************************.....6*********************************985 PP

>> HA2  Helicase associated domain (HA2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.2   0.0   2.5e-22   3.2e-19       1     108 []     476     564 ..     476     564 .. 0.90

  Alignments for each domain:
  == domain 1  score: 69.2 bits;  conditional E-value: 2.5e-22
         HA2   1 AlelLvalgALdeegnlTelGrkmaelPlsprlakmLlaaaeleegcldevitivAalsveeifleeneeekeeeeeeeekakkkrkeeekarrklahk 99 
                 Ale L +l +Ld+egnlT+lGrk +++Pl+p la mL+ +   e+ c +e++++ A+lsv +if+++n+++               k +++ r+++ h+
  EPX74384.1 476 ALEELNYLACLDDEGNLTPLGRKASDFPLDPNLAVMLIKS--PEFYCSNEILSLTALLSVPSIFVRPNSAR---------------KLADEIRQQFEHP 557
                 899*************************************..556***********************764...............4445555678888 PP

         HA2 100 daegDhltl 108
                 d  gDhltl
  EPX74384.1 558 D--GDHLTL 564
                 8..***997 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.8   0.0   1.1e-14   1.3e-11       6     110 ..     276     413 ..     268     414 .. 0.80

  Alignments for each domain:
  == domain 1  score: 44.8 bits;  conditional E-value: 1.1e-14
                 HHHHHHHTTTTSEEEEEESSHHHHHH........HHHHHHHT.........TSTEEEESTTSTHHHHHHHHHHHH....TTSSS.EEEESGGGTSSSTS CS
  Helicase_C   6 llellkleeeggkilifvntidrlek........vklllekk.........gikvavlhgelpqnereeileqfn....kgesd.vLiatdvaerGidi 82 
                 +l++ + ee  g+il+f++  +++e+        +                 ++v +l+g+lp n +++i+e       +g+ + v+i+t++ae++++i
  EPX74384.1 276 VLQI-HVEEGPGDILVFLTGEEEIEDacrkialeA------DdllregaagPLNVYPLYGSLPPNLQQRIFEPTPedtkSGHGRkVVISTNIAETSLTI 367
                 4444.578999***********8877853333331......23333356867********************9985554455555************** PP

                 TTESEEEESSSSSSH..................HHHHHHHTTSSST CS
  Helicase_C  83 pkvnlVinfdlprnv..................tsyiqriGRtgRa 110
                 +++ +V++ ++ ++                   +s++qr+GR+gR 
  EPX74384.1 368 DGIVYVVDPGFSKQKiynprirvesllvspiskASAQQRAGRAGRT 413
                 ************55335669999999*******************6 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.7   0.0   6.3e-13   8.1e-10       6     174 ..      83     238 ..      78     240 .. 0.80

  Alignments for each domain:
  == domain 1  score: 38.7 bits;  conditional E-value: 6.3e-13
                 HHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHS.TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTT..CSEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxx RF
        DEAD   6 eaiplilgggdvlvaaeTGsGKTlaflipvlqivyet.kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldng..vdiv 101
                 e ++l  +++ ++  +eTGsGKT+     vl   y++  + t+ ++ +  P r  a  +++++   ++   +++    ++v ++   ++  +g  + + 
  EPX74384.1  83 EFLKLYHENQIIVFVGETGSGKTTQIPQFVL---YDElPHLTNSQVACTQPRRVAAMSVAKRVADEMD---VKLG---EEVGYNIRFEDC-SGpnTMLK 171
                 556677788888999********98555555...5545799999*****************9999888...3333...234456666777.44448888 PP

                 EEEHHHHHH.HHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBS.HHHH CS
                 xxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxx RF
        DEAD 102 vgtpgrldd.llstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlp.kdvk 174
                 ++t g+l++  ++++   ls+ ++++lDEa++       d +  ++++++q   d k    +iv+SATl  ++ +
  EPX74384.1 172 YMTDGMLLReAMNDHA--LSRYSCIILDEAHERTLA--TDILMGLMKRIAQRRPDLK----IIVMSATLDaRKFQ 238
                 99******95557666..*************98886..99*********98888877....********977766 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.2   0.0   3.1e-09   3.9e-06       4     127 ..      90     227 ..      87     237 .. 0.76
   2 ?   -0.4   0.0         1   1.3e+03      51     108 ..     541     605 ..     532     621 .. 0.72

  Alignments for each domain:
  == domain 1  score: 27.2 bits;  conditional E-value: 3.1e-09
      AAA_22   4 tagilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelka...................erlsseelleale 83 
                 + +i+v +Ge+G+GKTt + +++  ++  +   +   ++v +t p      +++++++ +++++l +                   +  +   l+ea++
  EPX74384.1  90 ENQIIVFVGETGSGKTTQIPQFVLYDE-LP---HLTNSQVACTQPRRVAAMSVAKRVADEMDVKLGEevgynirfedcsgpntmlkYMTDGMLLREAMN 184
                 5789*******************9863.22...235555666666666899999999999999999999999*************6666777777**** PP

      AAA_22  84 qalraravielliiDEaqhlr.seealeeL.rsllnlsrkgvqliL 127
                 +++ +r+   ++i+DEa+  +   ++l  L ++++  +r ++++i+
  EPX74384.1 185 DHALSRYS--CIILDEAHERTlATDILMGLmKRIAQ-RRPDLKIIV 227
                 ********..********953245555555444444.455666665 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 1
      AAA_22  51 tsskdllrellralglelka.........erlsseellealeqalraravielliiDEaqh.lrseea 108
                 +s ++l+ e+ ++++++  +         + +sse   + +++++ ++++  l+  D++ + l + ++
  EPX74384.1 541 NSARKLADEIRQQFEHPDGDhltllnvyhAYKSSEGTSDWCWNHFLSHRA--LISADNVRNqL-RRTM 605
                 57788888888888888877777888876556666666777777777777..88888887777.4333 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   3.3e-07   0.00043       2     130 ..      92     237 ..      91     244 .. 0.80
   2 ?   -3.7   0.0       6.1   7.8e+03      30      49 ..     303     322 ..     299     324 .. 0.82

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 3.3e-07
                 EEEEEEESTTSSHHHHHHHHHHHHHHT.TS-EEEEEESTSSTTHHHHHHHHHHHTTEEEEE................SSTTSCHHHHHHHHHHHHHHTT CS
       SRP54   2 nvillvGlqGaGKTttlaKLaallkke.gkkvllvaaDtfRaaAveQLktlaeklgvpvik................kkeeadpaavakeavekakeek 83 
                 ++i++vG +G+GKTt + +   + +    ++  ++++   R+aA+   k +a++++v++ +                + +      +++ea++    ++
  EPX74384.1  92 QIIVFVGETGSGKTTQIPQFVLYDELPhLTNSQVACTQPRRVAAMSVAKRVADEMDVKLGEevgynirfedcsgpntMLKYMTDGMLLREAMNDHALSR 190
                 689*****************999888756788999999*******************987777777777666554332223345556778889999999 PP

                 SSEEEEEE--SSTTHHHHHHHHHHHHHHHSSSEEEEEEETTBHTHHH CS
       SRP54  84 idvvlvDTaGrlqndkelmeelkkikkvvkpdevllvldattgqeav 130
                 + ++++D a      ++++  l k     +pd +++v++at+   ++
  EPX74384.1 191 YSCIILDEAHERTLATDILMGLMKRIAQRRPDLKIIVMSATLDARKF 237
                 99*****999888888877777777777789999***9999887665 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 6.1
                 S-EEEEEESTSSTTHHHHHH CS
       SRP54  30 kkvllvaaDtfRaaAveQLk 49 
                 +k++l a D  R +A+  L+
  EPX74384.1 303 RKIALEADDLLREGAAGPLN 322
                 68999*********987665 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.011        14      22      40 ..      89     107 ..      42     122 .. 0.80
   2 !   10.1   0.0   0.00046      0.59     125     169 ..     183     232 ..     144     234 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.011
                 .TTSEEEEEESTTSTHHHH CS
      ResIII  22 krdkrglikmaTGtGKTlv 40 
                 ++++ ++++ +TG+GKT  
  EPX74384.1  89 HENQIIVFVGETGSGKTTQ 107
                 5667788**********75 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00046
                 ..HHHTTT-SEEEEETGGGTTS.T.....TTHHHHHT---SEEEEEESS- CS
      ResIII 125 seellrdrfdviiiDEaHrlgakk.....swreilekfkeavllglTATp 169
                  ++   +r+ +ii DEaH  + ++      +++i++  ++ +++ ++AT+
  EPX74384.1 183 MNDHALSRYSCIILDEAHERTLATdilmgLMKRIAQRRPDLKIIVMSATL 232
                 4556667788********888764577779999****9***********7 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   9.9e-06     0.013       7     127 ..      88     218 ..      80     227 .. 0.55

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 9.9e-06
      AAA_19   7 alkekvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAakelrerlaalgae..................atTiHrlalldfddlltea 87 
                 ++++++++ ++  G+GKT+ + + v +  el ++   ++++  + + Aa+ +++r+a  +++                   +T+ +       +     
  EPX74384.1  88 YHENQIIVFVGETGSGKTTQIPQFVLY-DELPHLTNSQVACTQPRRVAAMSVAKRVAD-EMDvklgeevgynirfedcsgPNTMLKY-----MT----D 175
                 788999999**********99887743.333334445555555555555555555411.1111233335554444443332222222.....22....2 PP

      AAA_19  88 lelleeaeeekklqeee.llivDEfqdvd...elqyrLlkallg 127
                   ll+ea +++ l +++ ++i DE+ + +   +  + L+k++++
  EPX74384.1 176 GMLLREAMNDHAL-SRYsCIILDEAHERTlatDILMGLMKRIAQ 218
                 2345577788899.5555******98754213445566666665 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   1.6e-05      0.02       5     114 ..      79     218 ..      77     229 .. 0.66

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1.6e-05
      AAA_30   5 eQaaavealltsgdrvavltGpAGtGKttalkalreaweaag...........grviglAptgkaAkvLa....eelgi..............eastia 74 
                 +Q++ + +l ++++ + v +G  G+GKtt + + +   e              +rv++++  +++A+++     ee+g               + +t  
  EPX74384.1  79 QQRDEFLKLYHENQ-IIVFVGETGSGKTTQIPQFVLYDELPHltnsqvactqpRRVAAMSVAKRVADEMDvklgEEVGYnirfedcsgpntmlKYMTDG 176
                 67777777877775.****************99876655444667888999999999999999999999844443333233334222222222555555 PP

      AAA_30  75 kllkrlkgrarlepgtllivDEagmv..dtkqlaallkaaek 114
                  ll++  +  +l++ +++i DEa     +t+ l  l+k++++
  EPX74384.1 177 MLLREAMNDHALSRYSCIILDEAHERtlATDILMGLMKRIAQ 218
                 555444455788889*******96432266666666666665 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   3.9e-05      0.05      14      53 ..      84     123 ..      69     195 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 3.9e-05
      AAA_23  14 eidF..skgltlItGpNGaGKTTildAiklaLygetprlsrk 53 
                  + +  ++ + +++G++G+GKTT +   +++Ly e p l ++
  EPX74384.1  84 FLKLyhENQIIVFVGETGSGKTTQI--PQFVLYDELPHLTNS 123
                 344476889**************44..567777777766665 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   4.5e-05     0.058       2      98 ..      92     200 ..      91     221 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 4.5e-05
     DUF2075   2 avvlVtGvaGtGKtvvllnllael.........eddeeertavylsvNhplvlvlrealakkeekkkkkeafeklssfinnlsef...kkaeekkeepk 88 
                 ++++  G++G+GKt    +++                + r+++ +sv ++  + +  +l ++   + + e+ ++++++ + ++ +   ++a ++++  +
  EPX74384.1  92 QIIVFVGETGSGKTTQIPQFVLYDelphltnsqVACTQPRRVAAMSVAKRVADEMDVKLGEEVGYNIRFEDCSGPNTMLKYMTDGmllREAMNDHALSR 190
                 567778********99999888776788755444444999999****************99997888889*************99************** PP

     DUF2075  89 edvvivDEAh 98 
                   ++i DEAh
  EPX74384.1 191 YSCIILDEAH 200
                 ********** PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00014      0.18      29      69 ..      87     129 ..      80     155 .. 0.68
   2 ?   -3.9   0.0       6.4   8.2e+03      50      80 ..     209     239 ..     206     241 .. 0.79
   3 ?   -3.0   0.0       3.5   4.5e+03      10      28 ..     681     699 ..     674     700 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00014
       AAA_7  29 llknkkpvllvGptGtGKtviikd..llkkldkekylsltinf 69 
                 l ++++ +++vG+tG+GKt+ i +  l ++l++ + + + ++ 
  EPX74384.1  87 LYHENQIIVFVGETGSGKTTQIPQfvLYDELPHLTNSQVACTQ 129
                 667788899************9996445566655555555554 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 6.4
       AAA_7  50 ikdllkkldkekylsltinfsaqtsanqlqd 80 
                 ++ l+k++ +++   ++i +sa+ +a+++q+
  EPX74384.1 209 LMGLMKRIAQRRPDLKIIVMSATLDARKFQK 239
                 5567788888888889999999999999997 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 3.5
       AAA_7  10 seilVptvdtvrysyllel 28 
                 ++ ++ tv +vr ++l+el
  EPX74384.1 681 TKSFIRTVSSVRPEWLVEL 699
                 67899**********9986 PP

>> Flavi_DEAD  Flavivirus DEAD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   6.4e-05     0.082      12     135 ..      99     231 ..      88     237 .. 0.66

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 6.4e-05
                 -TTS-TTTTH........HHHHHHH..HHHTT--EEEEESSHHHHHHHHHHTTTS-EEE-------------SEEEEEHHHHHHHHHHT------SEEE CS
  Flavi_DEAD  12 hPGaGktrkv........lpelvke..aierrlrtlvLaPtrvvlaemeealkglevryktsavkeektgrelvdvmchatftkrllspvrkknyelii 100
                   G+Gkt ++        lp+l+++  a+++  r   ++ ++ v+ em   l g ev y+ +  ++ +  + ++  m    + +  ++++   +y  ii
  EPX74384.1  99 ETGSGKTTQIpqfvlydeLPHLTNSqvACTQPRRVAAMSVAKRVADEMDVKL-GEEVGYNIRF-EDCSGPNTMLKYMTDGMLLREAMNDHALSRYSCII 195
                 5677777664222222223333332112233334445555555666666555.3455555543.46777899*************************** PP

                 EETTT--SHHHHHHHHHHHHHHHTT.S-EEEEEESS CS
  Flavi_DEAD 101 mDeahflDPasiaarGyletkaeeg.eaalilltat 135
                 +Deah    a     G +++ a+++ + ++i ++at
  EPX74384.1 196 LDEAHERTLATDILMGLMKRIAQRRpDLKIIVMSAT 231
                 *****9888887888999887765437899999998 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   8.1e-05       0.1     115     146 ..      78     108 ..      60     126 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 8.1e-05
       T2SSE 115 kekiaevlrkavrerglilvsGgTgsGKttll 146
                 +++ +e+l+   +e+++i++ G TgsGKtt +
  EPX74384.1  78 HQQRDEFLKLY-HENQIIVFVGETGSGKTTQI 108
                 56778899988.8999**************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (735 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       504  (0.0281109); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        70  (0.00390429); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.66u 0.29s 00:00:00.95 Elapsed: 00:00:00.43
# Mc/sec: 5089.51
//
Query:       EPX74385.1  [L=367]
Description: alpha-1,2-mannosyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     2e-111  372.4  10.2   2.5e-111  372.1  10.2    1.1  1  Glyco_transf_15  Glycolipid 2-alpha-mannosyltransferase


Domain annotation for each model (and alignments):
>> Glyco_transf_15  Glycolipid 2-alpha-mannosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  372.1  10.2  1.4e-115  2.5e-111      50     325 .]      52     330 ..      29     330 .. 0.95

  Alignments for each domain:
  == domain 1  score: 372.1 bits;  conditional E-value: 1.4e-115
  Glyco_transf_15  50 Pie..denenAtllalvrnselakilrsikkvekrFnkkfnYpyvfindepftekfkekieklveeadvefgeipkeewsyPefideekaakar 141
                       ++  +++enAtll+l+rnsel++i++++ + e++Fn  ++Yp+vf+ndepf++kfk++i++l++ + + fgeipke+w++Pe id  +a+ + 
       EPX74385.1  52 DVNnfQRKENATLLTLARNSELYEIVNTVLNYENKFNGIYQYPWVFLNDEPFSDKFKNTITRLTS-GPTYFGEIPKEQWDMPESIDVGRAEASW 144
                      333246678********************************************************.***************************9 PP

  Glyco_transf_15 142 eelad..iaygdsesyrhmcRyysGlfykhellkkydyYwRvePdiklycdieyDvfkymkdekkiygFtlslkeieetiktlWdstkkflken 233
                       e+a   i+yg ++syr+mcRyysG+f+kh+ll+ y+yYwRve d +l c+i+ D f  +++++k ygF++++kei+ t+++lW++t++f++++
       EPX74385.1 145 GEMAMrgIIYGGKKSYRQMCRYYSGFFWKHPLLDSYKYYWRVEHDSNLLCNIKKDPFTELREKNKTYGFVITIKEIAATVPSLWNTTMDFVATY 238
                      9999889*************************************************************************************** PP

  Glyco_transf_15 234 kefieeknslsflsdddqdtynlCeFwsnfeigdldffrseayekfFeylDskGgffYerWgdapvhsiavslllpkdkihffedigyshdp 325
                      +e+++ +n  +++s++++ +y+lC+Fwsnfe++dldffrs+ay+k+F+ylD++GgffYerWgdapvhsia+sl+l+kd+i ff+digy+h+p
       EPX74385.1 239 PELVAPNNLWNWISKNEGRDYSLCHFWSNFEVADLDFFRSDAYQKYFDYLDNAGGFFYERWGDAPVHSIALSLFLDKDQILFFKDIGYEHSP 330
                      *****************************************************************************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (367 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       639  (0.0356406); expected 358.6 (0.02)
Passed bias filter:                      463  (0.0258241); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2566.27
//
Query:       EPX74386.1  [L=617]
Description: ribosome biogenesis ATPase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.2e-46  156.3   0.0    7.5e-23   81.6   0.0    2.7  2  ABC_tran      ABC transporter
    1.4e-19   69.9   2.7    1.4e-19   69.9   2.7    2.8  2  ABC_tran_Xtn  ABC transporter
    1.3e-16   61.3   6.3     0.0024   17.8   0.2    4.3  4  AAA_21        AAA domain, putative AbiEii toxin, Type IV TA s
    2.1e-09   37.2   1.1     0.0016   17.9   0.3    4.0  3  SMC_N         RecF/RecN/SMC N terminal domain
    2.9e-09   36.5   0.2     0.0013   18.5   0.1    2.5  2  AAA_29        P-loop containing region of AAA domain
    2.3e-06   28.3  16.9    0.00086   19.9   0.3    4.5  5  AAA_23        AAA domain
    2.4e-06   27.7   5.1        0.1   12.7   0.0    4.2  3  Dynamin_N     Dynamin family
    3.1e-06   27.3   0.4     0.0026   17.8   0.1    3.0  2  MMR_HSR1      50S ribosome-binding GTPase
      4e-06   26.8   0.7      0.035   14.0   0.0    3.3  3  RsgA_GTPase   RsgA GTPase
    3.8e-05   23.6  14.3     0.0036   17.1   0.3    3.9  3  AAA_15        AAA ATPase domain
    4.6e-05   23.9   0.0        0.3   11.5   0.0    2.6  2  AAA_16        AAA ATPase domain
    9.7e-05   22.2   0.3       0.61    9.8   0.0    3.2  3  AAA_24        AAA domain
    0.00016   21.7   0.4       0.76    9.7   0.0    2.7  2  NACHT         NACHT domain
    0.00019   21.7   0.3        1.2    9.4   0.0    2.9  2  AAA_22        AAA domain
    0.00034   20.9   0.0       0.77   10.0   0.0    2.5  2  AAA_28        AAA domain
    0.00038   19.9   0.0       0.19   11.1   0.0    2.3  2  FtsK_SpoIIIE  FtsK/SpoIIIE family
    0.00059   20.4   1.1        2.1    8.9   0.0    3.3  3  AAA_18        AAA domain
    0.00071   19.7   3.7       0.95    9.5   0.0    3.5  3  DUF87         Helicase HerA, central domain
    0.00089   19.6   0.1        2.5    8.5   0.0    2.8  2  RNA_helicase  RNA helicase
      0.003   17.6   0.1          3    7.9   0.0    2.9  3  AAA_5         AAA domain (dynein-related subfamily)
     0.0039   17.4   0.0        2.2    8.4   0.0    2.7  2  AAA_33        AAA domain
     0.0051   16.3   0.0      0.074   12.6   0.0    2.5  2  FeoB_N        Ferrous iron transport protein B
     0.0058   16.4   0.0       0.58    9.9   0.0    2.8  2  AAA_30        AAA domain
     0.0061   15.9   0.1        2.4    7.4   0.0    2.5  2  Septin        Septin
     0.0073   16.7   0.1        2.5    8.6   0.0    3.2  3  AAA           ATPase family associated with various cellular 
     0.0075   15.8   1.3        1.4    8.3   0.1    2.7  2  Pox_A32       Poxvirus A32 protein
     0.0085   15.6   0.0        4.4    6.8   0.0    2.5  2  AAA_7         P-loop containing dynein motor region
     0.0098   16.1   0.1        5.8    7.2   0.0    2.9  2  Roc           Ras of Complex, Roc, domain of DAPkinase
  ------ inclusion threshold ------
      0.013   14.4   0.0        1.5    7.7   0.0    2.3  2  MeaB          Methylmalonyl Co-A mutase-associated GTPase Mea
      0.024   13.8   0.0        1.8    7.7   0.0    2.8  3  NB-ARC        NB-ARC domain
      0.035   13.7   0.1         11    5.5   0.0    2.6  2  AAA_25        AAA domain
      0.037   14.1   0.2       0.13   12.3   0.2    1.9  1  DUF2730       Protein of unknown function (DUF2730)
      0.039   13.6   0.0        2.8    7.5   0.0    2.6  2  AAA_27        AAA domain
      0.051   14.0   0.6       0.87   10.0   0.0    2.9  3  AAA_17        AAA domain
      0.076   12.4   0.1        7.1    5.9   0.0    3.0  3  ATPase        KaiC
      0.084   12.0   1.0         11    5.0   0.1    3.0  3  DAP3          Mitochondrial ribosomal death-associated protei
       0.12   12.0   0.0          3    7.4   0.0    2.2  2  ATP-synt_ab   ATP synthase alpha/beta family, nucleotide-bind
       0.16   12.0   1.8         24    5.0   0.2    3.6  2  TsaE          Threonylcarbamoyl adenosine biosynthesis protei


Domain annotation for each model (and alignments):
>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.0   0.0   1.4e-22   6.5e-20       3     137 .]      92     248 ..      90     248 .. 0.72
   2 !   81.6   0.0   1.6e-25   7.5e-23       2     137 .]     406     540 ..     405     540 .. 0.73

  Alignments for each domain:
  == domain 1  score: 72.0 bits;  conditional E-value: 1.4e-22
                 EEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEE.......EETTCEGGG..B-HHHCCHCEEEE-SS.--S-TTSBHHHH............ CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxx..xxxxxxxxxxxxxxxx.xxxxxxxxxxxx............ RF
    ABC_tran   3 nvslklkegekvaivGenGaGKStLlkllagllkpteGei.......lldgkdlke..qeleslrkeigvlpqe.pqlfpeltvren............ 79 
                 n  ++l++g++++++G+nG+GKSt+l+ la       ++i       + + +d++     ++s++++++ l+ e ++l                     
  EPX74386.1  92 NAVVELNHGQRYGLLGDNGSGKSTFLESLAARDVEIPEHIdvyllnaEAEPTDINAveYIIKSAKEKVQKLELEiEELSTAD----Dvddvlletkyee 186
                 67789**************************999999999665554433333333355445555555555555522222222....1344477777777 PP

                 .......HHHTCHHHHHHHSTTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 .......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  80 .......esdeeiekalsklglkelkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137
                        + +++++ +l+ lg ++   + +k+ ++ +SgG++ rv+l ral+ kp+llllDEpt+
  EPX74386.1 187 lddmdpsTFEAKAAMILNGLGFTQ---EMMKKPTKDMSGGWRMRVSLSRALFIKPSLLLLDEPTN 248
                 787776666666777777777555...7777778******************************8 PP

  == domain 2  score: 81.6 bits;  conditional E-value: 1.6e-25
                 EEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEET.TCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH........HHHTCHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........xxxxxxxxxxxx RF
    ABC_tran   2 knvslklkegekvaivGenGaGKStLlkllagllkpteGeilld.gkdlkeqeleslrkeigvlpqepqlfpeltvren........esdeeiekalsk 91 
                 +++s+ +  +++vaivG+nG+GKStLl+l++g+l p eG++    g +l +     ++++   lp e      ++  e           ++e+++++s 
  EPX74386.1 406 RDLSFGIDMDSRVAIVGKNGTGKSTLLNLITGMLIPIEGNVSRYsGLKLAK----YSQHSADQLPYE------KSPLEYvsetykskFPNRELQQWRSV 494
                 689**************************************2221222222....222222222222......22111122223333556668888888 PP

                 STTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  92 lglkelkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137
                 lg  +l  ++++s+ ++LS G k+rv+ a++ l++p +lllDEpt+
  EPX74386.1 495 LGKFGLSGQHQTSEIRTLSDGLKSRVVFAALALEEPHILLLDEPTN 540
                 888888888888999******************************8 PP

>> ABC_tran_Xtn  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   1.4       7.3   3.4e+03      35      60 ..       6      31 ..       1      40 [. 0.62
   2 !   69.9   2.7     3e-22   1.4e-19       5      78 ..     292     368 ..     290     376 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 7.3
  ABC_tran_Xtn 35 kqqkeikkleefIerfrakakkakqa 60
                  k   +++++ +  er++ak++  k  
    EPX74386.1  6 KSSSKLRREAKQAERLAAKGQAPKSK 31
                  55567777777777777766444433 PP

  == domain 2  score: 69.9 bits;  conditional E-value: 3e-22
  ABC_tran_Xtn   5 ngklteYkGnYseyleekeerleqqqkayekqqkeikkleefIerfrakakkakqaqsrekaLeklek...iekpee 78 
                   +++l +Y Gn++ y+++kee++ +q+kay kqq+ei+++++fI+  +  a+  +qa+s++k ++k+e    iekpe 
    EPX74386.1 292 KKQLIYYGGNFDIYMRTKEENETNQMKAYLKQQEEIAHIKKFIAGAGTYANLVRQAKSKQKIIDKMEAaglIEKPEP 368
                   6899**************************************************************98777888833 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   4.8e-05     0.023       3      63 ..     104     167 ..     103     201 .. 0.66
   2 !   12.4   0.0   0.00022       0.1     257     302 ..     237     279 ..     224     280 .. 0.73
   3 !   15.9   1.0   1.8e-05    0.0086       3      22 ..     419     438 ..     418     463 .. 0.78
   4 !   17.8   0.2     5e-06    0.0024     231     298 ..     506     567 ..     472     571 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 4.8e-05
      AAA_21   3 vliGpNgsGKSnLLdaldllarl....drdvegltdelsggggirkipslldlydpeipfefeie 63 
                 +l G+NgsGKS++L+ l  ++++      dv  l+ e+ ++  +++       +++ ++ e+eie
  EPX74386.1 104 GLLGDNGSGKSTFLESLA-ARDVeipeHIDVYLLNAEAEPTDINAVEYIIKSAKEKVQKLELEIE 167
                 699************993.3444666655555555555555555555555555555555555555 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 0.00022
      AAA_21 257 kgsllliDEpEngLHPkllrrllellkelsrngaQviltTHSplll 302
                 k+slll+DEp n+L+ +++  l    ++l++ +  +++t+HS  +l
  EPX74386.1 237 KPSLLLLDEPTNHLDLEAVVWLE---SYLAKYDKCLVVTSHSQDFL 279
                 349*************6555554...44555556789999996655 PP

  == domain 3  score: 15.9 bits;  conditional E-value: 1.8e-05
      AAA_21   3 vliGpNgsGKSnLLdaldll 22 
                 +++G+Ng+GKS+LL ++ ++
  EPX74386.1 419 AIVGKNGTGKSTLLNLITGM 438
                 79***************776 PP

  == domain 4  score: 17.8 bits;  conditional E-value: 5e-06
      AAA_21 231 elparelSdGtkrllalltallralkkgsllliDEpEngLHPkllrrllellkelsrngaQviltTHS 298
                    +r lSdG k+   ++++ l+ +    +ll+DEp n+L+   +  l++ +++   + + v+l++H+
  EPX74386.1 506 TSEIRTLSDGLKSRVVFAALALEEP---HILLLDEPTNHLDITSIDALAGAINR---WSGGVVLVSHD 567
                 5568899***999855555555555...89*******************99954...55599999997 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.3   3.4e-06    0.0016      27     209 ..     103     287 ..      88     296 .. 0.68
   2 !    9.6   0.1    0.0012      0.55      26      44 ..     417     435 ..     405     440 .. 0.83
   3 ?    4.8   0.0     0.034        16     148     200 ..     519     569 ..     495     587 .. 0.81

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 3.4e-06
                 EEEEESTTSSHHHHHHHHHHHCTT.TTTTTTCHCCCCCC--BTTCSSTTEEEEEEEEEETTEESSSSSSCEEEEEEEETTSEEEEEE.......TTEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......xxxxx RF
       SMC_N  27 taivGpNGSGKsnlldAilFvLGersakklrseklsdlihkskekasvkkaeveitfdnedkklkiekeevsisrrvkrkgeseyki.......ngkev 118
                   ++G NGSGKs +l+++      r+  ++ ++    l++  +e + ++   ve +++  ++k  ++k e++i+     ++  ++ +       ++ + 
  EPX74386.1 103 YGLLGDNGSGKSTFLESL----AARDV-EIPEHIDVYLLN--AEAEPTDINAVEYIIKSAKEK--VQKLELEIEELSTADDVDDVLLetkyeelDDMDP 192
                 5689*************9....44444.555555555555..577788888899988777666..7777777777776666656665222222244433 PP

                 -H..HHHHHHHHCTT-STT.......CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC-.SC CS
                 xx..xxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xx RF
       SMC_N 119 tk..kevsellesagiske.......lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemleka.dk 207
                 +   ++ + +l+  g+++e        +SgG +  v+l+  +    + + +l llDe   +LD + v  + ++l +      ++v+s+++++l+++  +
  EPX74386.1 193 STfeAKAAMILNGLGFTQEmmkkptkDMSGGWRMRVSLSRAL----FIKPSLLLLDEPTNHLDLEAVVWLESYLAKYD--KCLVVTSHSQDFLNNVcTN 285
                 331344455566666666677777777788877666665443....4456799**********************999..56899******99987455 PP

                 EE CS
                 xx RF
       SMC_N 208 lv 209
                 ++
  EPX74386.1 286 II 287
                 55 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.0012
                 EEEEEESTTSSHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxx RF
       SMC_N  26 ftaivGpNGSGKsnlldAi 44 
                   aivG+NG GKs ll+ i
  EPX74386.1 417 RVAIVGKNGTGKSTLLNLI 435
                 569**********998766 PP

  == domain 3  score: 4.8 bits;  conditional E-value: 0.034
                 HHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 148 aLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislree 200
                  ++fA  + +   + llDe   +LD + + ++a  +++ s    ++ +s++ +
  EPX74386.1 519 RVVFAALALEEPHILLLDEPTNHLDITSIDALAGAINRWS--GGVVLVSHDFR 569
                 4689999999999*********************999877..55666666555 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   2.3e-05     0.011      16      43 ..      94     121 ..      89     123 .. 0.77
   2 !   18.5   0.1   2.7e-06    0.0013      15      48 ..     408     441 ..     400     447 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 2.3e-05
      AAA_29  16 tieidlkgatlltGpsGsGKSTllDAiq 43 
                 ++e++  + + l G++GsGKST+l +++
  EPX74386.1  94 VVELNHGQRYGLLGDNGSGKSTFLESLA 121
                 5666644478899**********98765 PP

  == domain 2  score: 18.5 bits;  conditional E-value: 2.7e-06
      AAA_29  15 htieidlkgatlltGpsGsGKSTllDAiqalLvp 48 
                  ++ id+++ + ++G++G+GKSTll  i+ +L+p
  EPX74386.1 408 LSFGIDMDSRVAIVGKNGTGKSTLLNLITGMLIP 441
                 56778878899**************988888877 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1       6.8   3.2e+03     125     173 ..      11      59 ..       6      76 .. 0.76
   2 !   13.7   0.0   0.00014     0.065      22      39 ..     103     120 ..      81     122 .. 0.77
   3 ?   -1.1   0.2       4.9   2.3e+03     151     166 ..     155     170 ..     133     201 .. 0.56
   4 ?    3.8   1.0      0.16        74     131     188 ..     291     357 ..     258     365 .. 0.65
   5 !   19.9   0.3   1.8e-06   0.00086      23      52 ..     419     448 ..     403     610 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 6.8
      AAA_23 125 lgskkiilnlilflgqerfeefelkdkkerleelekeleeledekklle 173
                 l ++ ++ ++++ +gq  + + +++ k ++++ ++++l +l++ +  +e
  EPX74386.1  11 LRREAKQAERLAAKGQAPKSKSSKNGKDKEVDGVTTDLSQLSTSDPIFE 59 
                 4555667778888888888888888888888888888888887776666 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 0.00014
      AAA_23  22 tlItGpNGaGKTTildAi 39 
                 + + G+NG+GK+T+l+ +
  EPX74386.1 103 YGLLGDNGSGKSTFLESL 120
                 6789************87 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 4.9
      AAA_23 151 kkerleelekeleele 166
                  ke++++le e+eel+
  EPX74386.1 155 AKEKVQKLELEIEELS 170
                 2223333333333322 PP

  == domain 4  score: 3.8 bits;  conditional E-value: 0.16
      AAA_23 131 ilnlilflgqerfeefel..kdkkerleelekeleeledekkllekl.......eqekekekeleel 188
                   ++++++g     ++++  +++ ++++++ k++ee+  +kk++           q+k+k+k +++ 
  EPX74386.1 291 TKKQLIYYGGNFDIYMRTkeENETNQMKAYLKQQEEIAHIKKFIAGAgtyanlvRQAKSKQKIIDKM 357
                 4455566666554444442234445999999999999999998877777777666777777666554 PP

  == domain 5  score: 19.9 bits;  conditional E-value: 1.8e-06
      AAA_23  23 lItGpNGaGKTTildAiklaLygetprlsr 52 
                 +I+G+NG+GK+T+l+ i+ +L    ++ sr
  EPX74386.1 419 AIVGKNGTGKSTLLNLITGMLIPIEGNVSR 448
                 8*****************999765444444 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   0.4   0.00025      0.12       3      25 ..     105     127 ..     104     299 .. 0.50
   2 ?   -0.1   0.4       1.8   8.3e+02      48      75 ..     310     337 ..     282     364 .. 0.69
   3 !   12.7   0.0   0.00021       0.1       1      69 [.     418     495 ..     418     544 .. 0.59

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00025
                 EEEBTTTTHHHHHHHHHTS--S- CS
   Dynamin_N   3 vvGsqSsGKSSvlnaLlgedilp 25 
                 ++G+  sGKS++l++L  +d+  
  EPX74386.1 105 LLGDNGSGKSTFLESLAARDVEI 127
                 57999**************9743 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 1.8
                 CS...SSEEEET-EB--CHHHHHHHHHH CS
   Dynamin_N  48 eravkeelkekekkledfsevreeieke 75 
                 e+++++++k   k++e++ ++++ i  +
  EPX74386.1 310 EENETNQMKAYLKQQEEIAHIKKFIAGA 337
                 3467777888888888888888877655 PP

  == domain 3  score: 12.7 bits;  conditional E-value: 0.00021
                 EEEEEBTTTTHHHHHHHHHTS--S---SSS---S-EEEEECCT---C........CS...SSEEEE..T-EB--CHHHH CS
   Dynamin_N   1 iavvGsqSsGKSSvlnaLlgedilprgpnptTrrplelqlgeeeeas........eravkeelkek..ekkledfsevr 69 
                 +a+vG+   GKS++ln ++g  i p++ n+     l+l + ++ +a          + v+e++k+k  +++l+++  v 
  EPX74386.1 418 VAIVGKNGTGKSTLLNLITGMLI-PIEGNVSRYSGLKLAKYSQHSADqlpyekspLEYVSETYKSKfpNRELQQWRSVL 495
                 79******************884.6666655555555555333333334444444445555555555555555555555 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0     0.024        11       3      25 ..     104     126 ..     102     133 .. 0.83
   2 !   17.8   0.1   5.6e-06    0.0026       1      22 [.     417     438 ..     417     460 .. 0.79

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.024
                 EEEESTTSSHHHHHHHHHTSTEE CS
    MMR_HSR1   3 aivGrpNvGKStLinaltgekai 25 
                 +++G   +GKSt++ +l  + ++
  EPX74386.1 104 GLLGDNGSGKSTFLESLAARDVE 126
                 799**************987554 PP

  == domain 2  score: 17.8 bits;  conditional E-value: 5.6e-06
                 EEEEEESTTSSHHHHHHHHHTS CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltge 22 
                 +vaivG+  +GKStL+n +tg 
  EPX74386.1 417 RVAIVGKNGTGKSTLLNLITGM 438
                 69******************96 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0    0.0042         2      94     122 ..      95     123 ..      67     173 .. 0.80
   2 ?    0.5   0.1         1   4.9e+02      36      99 ..     266     336 ..     254     342 .. 0.74
   3 !   14.0   0.0   7.5e-05     0.035     100     130 ..     416     446 ..     395     454 .. 0.79

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0042
                  HHHCTTSEEEEECSTTSSHHHHHHHHCTT CS
  RsgA_GTPase  94 kellkdktsvlvGqSGvGKStLinallpe 122
                   el +++   l+G  G GKSt++++l+ +
   EPX74386.1  95 VELNHGQRYGLLGDNGSGKSTFLESLAAR 123
                  3444458999****************986 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 1
                  HHHHHHH.HHTT-EEEEEEE-GGG--HHH......HHHHHHHHHHHTTSEEEE--TTTHTTHHHHHHHCTT CS
  RsgA_GTPase  36 drfLvla.eekgiepvivlnKiDlleeee......eleelkeelealgyevllvsaktkegleelkellkd 99 
                  d++Lv+  ++++    ++ n iDl ++++      +++ ++ + e+ +++ ++   k++e+++++k+ +++
   EPX74386.1 266 DKCLVVTsHSQDFLNNVCTNIIDLNTKKQliyyggNFDIYMRTKEENETNQMKAYLKQQEEIAHIKKFIAG 336
                  66666541455667788888888888888888888777778888888888888888888888888887765 PP

  == domain 3  score: 14.0 bits;  conditional E-value: 7.5e-05
                  SEEEEECSTTSSHHHHHHHHCTT-----S-- CS
  RsgA_GTPase 100 ktsvlvGqSGvGKStLinallpelelktgev 130
                  + +++vG+ G GKStL+n +++ l    g+v
   EPX74386.1 416 SRVAIVGKNGTGKSTLLNLITGMLIPIEGNV 446
                  66899**************998765555555 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   6.2    0.0041       1.9      28     119 ..     105     191 ..      96     383 .. 0.66
   2 !   17.1   0.3   7.7e-06    0.0036      11      47 ..     405     439 ..     405     482 .. 0.86
   3 ?   -1.4   0.1       3.2   1.5e+03     322     336 ..     528     542 ..     468     542 .. 0.79

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0041
      AAA_15  28 liGkNnsGKSsilealdlFlnnkekknkkvikiekedleifeniseskdikIdvef......aekekakeyektlkskekkkadlllkkkesdlkkti 119
                 l G N+sGKS++le l     ++        ++  e ++++  ++e  + +I+  +      +ek ++ e e ++ s++++ +d+ll+ k+++l+++ 
  EPX74386.1 105 LLGDNGSGKSTFLESL---AARD--------VEIPEHIDVYLLNAEAEPTDINAVEyiiksaKEKVQKLELEIEELSTADDVDDVLLETKYEELDDMD 191
                 57**************...3333........3333344444444444444443322233222122344445566666666677777777777666554 PP

  == domain 2  score: 17.1 bits;  conditional E-value: 7.7e-06
      AAA_15  11 FRslkdveidlseeltvliGkNnsGKSsilealdlFl 47 
                 +R l+ + id+++    ++GkN++GKS++l+++  +l
  EPX74386.1 405 YRDLS-FGIDMDS-RVAIVGKNGTGKSTLLNLITGML 439
                 56666.8899999.9****************997665 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 3.2
      AAA_15 322 eknvilliEEPEahL 336
                 e+++ill++EP +hL
  EPX74386.1 528 EEPHILLLDEPTNHL 542
                 45799******9997 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.0    0.0019      0.88      29     106 ..     105     185 ..      89     294 .. 0.69
   2 !   11.5   0.0   0.00064       0.3      26     143 ..     417     537 ..     402     564 .. 0.56

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.0019
      AAA_16  29 lsGesGvGKsslvrellr...alekd.ggiflrgkcdqlesa.ipysalaqalareellrqllde..aesaeleawrekleeala 106
                 l G+ G+GKs+ +++l+    ++ ++ ++++l+++++  + + ++y  +++ + + e +++l+ e  + s++ + ++  le+ ++
  EPX74386.1 105 LLGDNGSGKSTFLESLAArdvEIPEHiDVYLLNAEAEPTDINaVEY--IIKSA-K-EKVQKLELEieELSTADDVDDVLLETKYE 185
                 78***********999964444444476777666666662222444..55555.3.33344444422233344444444444444 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 0.00064
      AAA_16  26 lvllsGesGvGKsslvrellr...alekd...ggiflrgkcdql.esaipysa.laqalareellrqlldeaesaeleawrekleeala.avpelagae 115
                  v ++G  G+GKs+l++ +     ++e++   +  +  +k+ q+   ++py    +++   e++  +  ++    el++wr  l + ++ ++++ ++++
  EPX74386.1 417 RVAIVGKNGTGKSTLLNLITGmliPIEGNvsrYSGLKLAKYSQHsADQLPYEKsPLEYV-SETYKSKFPNR----ELQQWRSVLGK-FGlSGQHQTSEI 509
                 5899************9998533333333433222222222222133356644444444.33444444444....77777774433.441222222222 PP

      AAA_16 116 asrllellkrll..allsrderplvlvlDd 143
                  + l + lk+ +  a l   e+p +l+lD+
  EPX74386.1 510 -RTLSDGLKSRVvfAAL-ALEEPHILLLDE 537
                 .5555555555543333.336667777774 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0    0.0039       1.9       2      22 ..     100     120 ..      99     187 .. 0.79
   2 ?   -0.1   0.2       1.4   6.7e+02      79     110 ..     315     346 ..     310     360 .. 0.82
   3 !    9.8   0.0    0.0013      0.61       3      22 ..     416     435 ..     414     466 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0039
      AAA_24   2 klkiliyGpsgiGKTtlakel 22 
                 ++++ + G++g+GK+t++ +l
  EPX74386.1 100 GQRYGLLGDNGSGKSTFLESL 120
                 578899************999 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 1.4
      AAA_24  79 elclaevirqnekaeskedkgdgkG.ygelaee 110
                 ++++a++++q e+  +++++ +g+G y++l ++
  EPX74386.1 315 NQMKAYLKQQEEI-AHIKKFIAGAGtYANLVRQ 346
                 6789999999999.9999*******99987655 PP

  == domain 3  score: 9.8 bits;  conditional E-value: 0.0013
      AAA_24   3 lkiliyGpsgiGKTtlakel 22 
                  +++i+G++g+GK+tl++ +
  EPX74386.1 416 SRVAIVGKNGTGKSTLLNLI 435
                 589*************9877 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.0    0.0016      0.76       5      21 ..     105     121 ..     102     125 .. 0.91
   2 !    9.1   0.3    0.0025       1.2       2      20 ..     417     435 ..     416     439 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.0016
                 EEC-TTTCHHHHHHHHH CS
       NACHT   5 lqGeaGsGKTtLlqkla 21 
                 l G++GsGK+t+l++la
  EPX74386.1 105 LLGDNGSGKSTFLESLA 121
                 68************998 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0025
                 CEEEEC-TTTCHHHHHHHH CS
       NACHT   2 lvilqGeaGsGKTtLlqkl 20 
                  v++ G++G GK+tLl  +
  EPX74386.1 417 RVAIVGKNGTGKSTLLNLI 435
                 689************9865 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.0    0.0025       1.2      10      46 ..     105     165 ..      99     270 .. 0.68
   2 !    9.2   0.1     0.003       1.4       8      29 ..     418     439 ..     414     558 .. 0.64

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0025
      AAA_22  10 vtGesGtGKTtllrrlleqldeeakaee........................erpevvfvt 46 
                 + G  G+GK+t l+ l+ +++e +++ +                        e+++ ++ +
  EPX74386.1 105 LLGDNGSGKSTFLESLAARDVEIPEHIDvyllnaeaeptdinaveyiiksakEKVQKLELE 165
                 5699***************998777666777776666644444444444433333333444 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.003
      AAA_22   8 lvvtGesGtGKTtllrrlleql 29 
                 ++++G  GtGK+tll+ ++  l
  EPX74386.1 418 VAIVGKNGTGKSTLLNLITGML 439
                 589************9988776 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.0    0.0016      0.77       4      61 ..     105     161 ..     102     185 .. 0.67
   2 !    8.5   0.0    0.0048       2.3       1      20 [.     417     436 ..     417     474 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.0016
      AAA_28   4 itGgestGKTtlleaLaargypvvpEaareileeklakgedalpwv.edllafaervle 61 
                 ++G  ++GK+t le Laar+++ +pE    +l +  a+ +d +++v + +   +e+v +
  EPX74386.1 105 LLGDNGSGKSTFLESLAARDVE-IPEHIDVYLLNAEAEPTD-INAVeYIIKSAKEKVQK 161
                 67889**************988.588888888888777776.45552333333333333 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0048
      AAA_28   1 kivitGgestGKTtlleaLa 20 
                 +++i+G  +tGK+tll+ ++
  EPX74386.1 417 RVAIVGKNGTGKSTLLNLIT 436
                 79**************9775 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0     0.011         5      44      59 ..     105     120 ..      90     157 .. 0.83
   2 !   11.1   0.0   0.00039      0.19      20      61 ..     392     436 ..     388     442 .. 0.80

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.011
                   EE--TTSSHHHHHHHH CS
  FtsK_SpoIIIE  44 vaGatgsGKStalntL 59 
                   ++G  gsGKSt+l +L
    EPX74386.1 105 LLGDNGSGKSTFLESL 120
                   5799*********998 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.00039
                   EEEEEET.TS-EEEEEGGGS-....SEEEE--TTSSHHHHHHHHHH CS
  FtsK_SpoIIIE  20 valgkei.sgnplvldlkkma...shllvaGatgsGKStalntLil 61 
                   va+  ++ +++ l+ dl+      s + ++G  g+GKSt ln Li+
    EPX74386.1 392 VAFSYDGnIDHSLYRDLSFGIdmdSRVAIVGKNGTGKSTLLN-LIT 436
                   6677788899999999976555669**************997.555 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.0    0.0045       2.1       3      25 ..     105     130 ..     104     188 .. 0.69
   2 ?   -0.9   0.0       4.9   2.3e+03      26      69 ..     284     329 ..     263     363 .. 0.62
   3 !    8.4   0.1    0.0063         3       1      25 [.     418     451 ..     418     565 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0045
      AAA_18   3 ltGtpGvGKttlakeLskrl.gf..g 25 
                 l G  G+GK+t+ + L+ r  ++  +
  EPX74386.1 105 LLGDNGSGKSTFLESLAARDvEIpeH 130
                 78999***********9995444431 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 4.9
      AAA_18  26 vnlrdvakenglllevdpe..aldeskrldedkldklldaleenss 69 
                 +n++d+ ++++l ++  ++    + +++ +++++++ l++ ee++ 
  EPX74386.1 284 TNIIDLNTKKQLIYYGGNFdiYMRTKEENETNQMKAYLKQQEEIAH 329
                 5666666666666666666644444444444555555555555544 PP

  == domain 3  score: 8.4 bits;  conditional E-value: 0.0063
      AAA_18   1 IlltGtpGvGKttlakeLskrl.gf........g 25 
                 +++ G+ G+GK+tl + +  +l  +        g
  EPX74386.1 418 VAIVGKNGTGKSTLLNLITGMLiPIegnvsrysG 451
                 689***********99997665444555554442 PP

>> DUF87  Helicase HerA, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.032        15      25      46 ..     102     123 ..      95     132 .. 0.87
   2 ?    4.2   0.4     0.086        41      95     163 ..     123     190 ..     119     223 .. 0.74
   3 !    9.5   0.0     0.002      0.95      24      46 ..     416     438 ..     407     446 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.032
       DUF87  25 HlAilgsTGsGKSntvavLlee 46 
                 + + lg  GsGKS++  +L ++
  EPX74386.1 102 RYGLLGDNGSGKSTFLESLAAR 123
                 6789************999876 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.086
       DUF87  95 wsldpeelldlleeddkpaaavqrsvleealdqaka.....keekeklssdepveklleelkkekeelrklknq 163
                 +++++ e++d++   + +a+++  +++e+++++ak+     + e+e+ls+++ v  +l e+k     +++l+++
  EPX74386.1 123 RDVEIPEHIDVYLL-NAEAEPTDINAVEYIIKSAKEkvqklELEIEELSTADDVDDVLLETK-----YEELDDM 190
                 56677788888888.88888999************999989999999999999998888888.....3333333 PP

  == domain 3  score: 9.5 bits;  conditional E-value: 0.002
       DUF87  24 rHlAilgsTGsGKSntvavLlee 46 
                  ++Ai+g+ G+GKS++  ++   
  EPX74386.1 416 SRVAIVGKNGTGKSTLLNLITGM 438
                 689**************999755 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   0.0    0.0054       2.5       3      41 ..     105     140 ..     104     147 .. 0.79
   2 !    7.9   0.0    0.0084       3.9       2      22 ..     419     439 ..     418     464 .. 0.79

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0054
  RNA_helicase   3 lyGpsgeGKStlakeLakallkklklkkkdsvysrnped 41 
                   l G++g GKSt+ ++La++     + +++ +vy  n+e 
    EPX74386.1 105 LLGDNGSGKSTFLESLAARDV---EIPEHIDVYLLNAEA 140
                   579************886544...678888888877766 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0084
  RNA_helicase   2 wlyGpsgeGKStlakeLakal 22 
                    ++G++g+GKStl + ++  l
    EPX74386.1 419 AIVGKNGTGKSTLLNLITGML 439
                   689***********9965544 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.0    0.0063         3       4      41 ..     105     145 ..     104     164 .. 0.83
   2 ?    6.2   0.1      0.02       9.4       2      23 ..     418     439 ..     417     453 .. 0.82
   3 ?   -2.3   0.0       8.9   4.2e+03      62      73 ..     526     537 ..     504     547 .. 0.74

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0063
                 EE--SSSSHHHHHHHGGGGB...S--EEEEE--TT--HHHH CS
       AAA_5   4 LvGppGtgKselaerlaaal...nreveyvqltrdtteedl 41 
                 L+G+ G+gKs++ e+laa+       + +++l++  +++d+
  EPX74386.1 105 LLGDNGSGKSTFLESLAARDveiPEHIDVYLLNAEAEPTDI 145
                 89***************987677888888888888888777 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.02
                 EEEE--SSSSHHHHHHHGGGGB CS
       AAA_5   2 vlLvGppGtgKselaerlaaal 23 
                 v +vG+ GtgKs+l   +  +l
  EPX74386.1 418 VAIVGKNGTGKSTLLNLITGML 439
                 5689***********9998877 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 8.9
                 ---G-SEEEEES CS
       AAA_5  62 aaregeilvlDE 73 
                 a +e++il+lDE
  EPX74386.1 526 ALEEPHILLLDE 537
                 556999999999 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.0    0.0046       2.2       6      29 ..     107     132 ..     105     170 .. 0.76
   2 ?    5.8   0.1     0.031        14       3      16 ..     419     432 ..     418     439 .. 0.87

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0046
      AAA_33   6 GlpGsGKstlaerllkklg..avlls 29 
                 G +GsGKst++e+l+++     ++++
  EPX74386.1 107 GDNGSGKSTFLESLAARDVeiPEHID 132
                 779***********966545655555 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.031
      AAA_33   3 llvGlpGsGKstla 16 
                  +vG +G+GKstl+
  EPX74386.1 419 AIVGKNGTGKSTLL 432
                 689*********97 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.79   3.7e+02       4      27 ..     104     127 ..     101     140 .. 0.85
   2 !   12.6   0.0   0.00016     0.074       2      33 ..     417     452 ..     416     465 .. 0.75

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.79
                 EEEESTTSSHHHHHHHHHTTSEEE CS
      FeoB_N   4 alvGnpnvGkttlfnaltgakqkv 27 
                  l+G+  +Gk+t++++l+  + ++
  EPX74386.1 104 GLLGDNGSGKSTFLESLAARDVEI 127
                 6899***********999877665 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 0.00016
                 EEEEEESTTSSHHHHHHHHHTT....SEEEEESTTS CS
      FeoB_N   2 tvalvGnpnvGkttlfnaltga....kqkvgNwpGv 33 
                 +va+vG+  +Gk+tl+n +tg+    + +v+ ++G 
  EPX74386.1 417 RVAIVGKNGTGKSTLLNLITGMlipiEGNVSRYSGL 452
                 69*******************822223556666665 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0      0.14        65      21      40 ..     103     122 ..      91     141 .. 0.79
   2 !    9.9   0.0    0.0012      0.58      21      47 ..     418     449 ..     412     569 .. 0.53

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.14
      AAA_30  21 avltGpAGtGKttalkalre 40 
                   l G  G+GK+t l++l++
  EPX74386.1 103 YGLLGDNGSGKSTFLESLAA 122
                 567899*********99865 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.0012
      AAA_30  21 avltGpAGtGKttalkalreaweaa.g....g 47 
                 ++++G  GtGK+t+l+ ++ ++    g    +
  EPX74386.1 418 VAIVGKNGTGKSTLLNLITGMLIPIeGnvsrY 449
                 6899*************987765552444443 PP

>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0    0.0051       2.4      10      64 ..     106     164 ..     103     177 .. 0.63
   2 ?    5.9   0.0     0.014       6.8       6      24 ..     417     435 ..     411     462 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0051
                 EEBTTSSCCCCCCTTSSSS------------.------S-EEEEEEE...EETTCEEEE CS
      Septin  10 vGesglGkttlintlfetdlieeekleease.kkkktveikkkkvvi...eedgvklnl 64 
                  G++g Gk+t++++l ++d+   e+++      +++ ++i++ + +i   +e+ +kl+l
  EPX74386.1 106 LGDNGSGKSTFLESLAARDVEIPEHIDVYLLnAEAEPTDINAVEYIIksaKEKVQKLEL 164
                 69**************9998766444433221334444555444444111344445544 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.014
                 EEEEEEBTTSSCCCCCCTT CS
      Septin   6 tlmvvGesglGkttlintl 24 
                  + +vG++g+Gk+tl+n +
  EPX74386.1 417 RVAIVGKNGTGKSTLLNLI 435
                 5789************965 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0       0.1        48       3      45 ..     105     161 ..     103     245 .. 0.76
   2 !    8.6   0.0    0.0052       2.5       2      45 ..     419     464 ..     418     482 .. 0.86
   3 ?   -1.5   0.0       6.7   3.1e+03      49      66 ..     521     537 ..     492     542 .. 0.75

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.1
                 EESSTTSSHHHHHHHHHHH..............HTHEEEEEETTTCSSSSTTHHHHH CS
         AAA   3 lyGppGtGKTllakavake..............lgvefleisgsellskyvgesekk 45 
                 l G  G GK+++ +++a                +++e   i++ e + k  +e+ +k
  EPX74386.1 105 LLGDNGSGKSTFLESLAARdveipehidvyllnAEAEPTDINAVEYIIKSAKEKVQK 161
                 7899************99976666665554433345556666666553333333333 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0052
                 EEESSTTSSHHHHHHHHHHHH...THEEEEEETTTCSSSSTTHHHHH CS
         AAA   2 llyGppGtGKTllakavakel...gvefleisgsellskyvgesekk 45 
                  ++G  GtGK++l + +   l   + ++ + sg +l  ky ++s+++
  EPX74386.1 419 AIVGKNGTGKSTLLNLITGMLipiEGNVSRYSGLKLA-KYSQHSADQ 464
                 579*****************76667889999999999.888887766 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 6.7
                 HHHHHHHTSTSEEEEEET CS
         AAA  49 lfkeakekakpsilfiDE 66 
                 +f+++  + +p+il++DE
  EPX74386.1 521 VFAALALE-EPHILLLDE 537
                 44433333.599****99 PP

>> Pox_A32  Poxvirus A32 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.1     0.003       1.4      15      43 ..     102     130 ..      96     187 .. 0.85
   2 ?    5.3   0.1     0.025        12      12      36 ..     414     437 ..     408     441 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.003
     Pox_A32  15 rlalvGgsGsGktvyLlsLlrtlvkkykh 43 
                 r  l+G  GsGk ++L sL  + v+   h
  EPX74386.1 102 RYGLLGDNGSGKSTFLESLAARDVEIPEH 130
                 6779***************8776665555 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.025
     Pox_A32  12 kpFrlalvGgsGsGktvyLlsLlrt 36 
                 ++ r+a+vG+ G Gk + Ll+L++ 
  EPX74386.1 414 MDSRVAIVGKNGTGKST-LLNLITG 437
                 5679***********98.5567665 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.0     0.017       8.2      31      90 ..      98     160 ..      91     164 .. 0.80
   2 !    6.8   0.0    0.0093       4.4      31      52 ..     413     434 ..     407     447 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.017
       AAA_7  31 knkkpvllvGptGtGKtviikd.llkkld.kekylsltinfsaq.tsanqlqdiiesklekrr 90 
                 ++++   l G+ G+GK++ +++   + ++ +e++ +  +n  a  t+ n +  ii+s  ek +
  EPX74386.1  98 NHGQRYGLLGDNGSGKSTFLESlAARDVEiPEHIDVYLLNAEAEpTDINAVEYIIKSAKEKVQ 160
                 677778899*************77788887888999999988864677888888888777765 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0093
       AAA_7  31 knkkpvllvGptGtGKtviikd 52 
                 + +  v +vG+ GtGK+++++ 
  EPX74386.1 413 DMDSRVAIVGKNGTGKSTLLNL 434
                 5678899***********9875 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.0     0.012       5.8       4      25 ..     105     126 ..     102     166 .. 0.81
   2 ?    5.8   0.1     0.032        15       1      18 [.     417     434 ..     417     447 .. 0.90

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.012
                 EESSTTSSHHHHHHCHCT-CCC CS
         Roc   4 lvGdsgvGKtsllkrfvedkfs 25 
                 l+Gd+g+GK+++l+++  ++++
  EPX74386.1 105 LLGDNGSGKSTFLESLAARDVE 126
                 89************99987765 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.032
                 EEEEESSTTSSHHHHHHC CS
         Roc   1 KvvlvGdsgvGKtsllkr 18 
                 +v +vG++g+GK++ll+ 
  EPX74386.1 417 RVAIVGKNGTGKSTLLNL 434
                 589************985 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.0    0.0032       1.5      17      52 ..      88     123 ..      77     137 .. 0.84
   2 ?    4.2   0.0     0.038        18      30      54 ..     416     440 ..     402     447 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0032
                 HHHHHHGGG-S-SEEEEEEE-TTSSHHHHHHHHHHH CS
        MeaB  17 ellerllakaGraqvvGltGvPGaGkstlvealgle 52 
                  l+e+++ +  + q+ Gl G  G+Gkst++e l+++
  EPX74386.1  88 LLIENAVVELNHGQRYGLLGDNGSGKSTFLESLAAR 123
                 56777777788899*****************99875 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.038
                 EEEEEEE-TTSSHHHHHHHHHHHHH CS
        MeaB  30 qvvGltGvPGaGkstlvealglelr 54 
                  +v + G  G+Gkstl++ ++  l+
  EPX74386.1 416 SRVAIVGKNGTGKSTLLNLITGMLI 440
                 6899*************98876665 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0      0.16        78      24      55 ..     104     135 ..      90     190 .. 0.72
   2 ?   -0.8   0.0       1.5     7e+02      73     135 ..     203     269 ..     193     295 .. 0.67
   3 ?    7.7   0.0    0.0039       1.8      21      48 ..     416     443 ..     402     504 .. 0.83

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.16
                 EEEESTTSSHHHHHHHHCCSHCCCCCCBTEEE CS
      NB-ARC  24 alvGmgGvGKttlakqilnksdevegrFdsva 55 
                 +l G  G+GK+t +++      e+ ++ d++ 
  EPX74386.1 104 GLLGDNGSGKSTFLESLAARDVEIPEHIDVYL 135
                 7899********99988777677777777665 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 1.5
                 HHHHHCCCTTSSSS-STTS....HHHHHHHHCCCTTEEEEEEEE-SHHHH.....HHHHCHTTSEEE CS
      NB-ARC  73 lkeLslseddleekeeves....lkrklvrlLltkrfllvlDDVweeedwdkigvvlparenrlrvl 135
                 l+ L+ +++ +++ ++  s    +   l r+L  k +ll+lD   ++ d++++    +   +  ++l
  EPX74386.1 203 LNGLGFTQEMMKKPTKDMSggwrMRVSLSRALFIKPSLLLLDEPTNHLDLEAVVWLESYLAKYDKCL 269
                 555555544444444444466668889999************9888888877765444333333443 PP

  == domain 3  score: 7.7 bits;  conditional E-value: 0.0039
                 EEEEEEESTTSSHHHHHHHHCCSHCCCC CS
      NB-ARC  21 lvvalvGmgGvGKttlakqilnksdeve 48 
                   va+vG+ G GK+tl++ i   +  +e
  EPX74386.1 416 SRVAIVGKNGTGKSTLLNLITGMLIPIE 443
                 4599************998876655555 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0      0.03        14      38      56 ..     105     123 ..      95     161 .. 0.82
   2 ?    5.5   0.0     0.024        11      31      50 ..     413     432 ..     406     436 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.03
      AAA_25  38 laGapgtGKttlaldlala 56 
                 l G+ g+GK+t++ +la+ 
  EPX74386.1 105 LLGDNGSGKSTFLESLAAR 123
                 78*************9986 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.024
      AAA_25  31 pagelallaGapgtGKttla 50 
                  +++ ++++G  gtGK+tl+
  EPX74386.1 413 DMDSRVAIVGKNGTGKSTLL 432
                 678899************97 PP

>> DUF2730  Protein of unknown function (DUF2730)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.2   0.00028      0.13      33      70 ..     143     180 ..     131     195 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00028
     DUF2730  33 edleklaekveendkrlteletkvenLPtakdlekLkl 70 
                  d++ ++ ++++ ++++++le ++e+L ta+d++++ l
  EPX74386.1 143 TDINAVEYIIKSAKEKVQKLELEIEELSTADDVDDVLL 180
                 689999999************************98644 PP

>> AAA_27  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0      0.12        58      16      47 ..      92     121 ..      75     137 .. 0.69
   2 ?    7.5   0.0    0.0059       2.8      19      53 ..     408     442 ..     403     450 .. 0.78

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.12
      AAA_27  16 drsldfsaeeadlhliyGpNEAGKstalrAis 47 
                 +  ++++ + ++   ++G N +GKst l+++ 
  EPX74386.1  92 NAVVELN-HGQRYG-LLGDNGSGKSTFLESLA 121
                 5555555.334443.47***********9876 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0059
      AAA_27  19 ldfsaeeadlhliyGpNEAGKstalrAisdllfGi 53 
                 l+f+ + ++   i+G N +GKst+l+ i+ +l  i
  EPX74386.1 408 LSFGIDMDSRVAIVGKNGTGKSTLLNLITGMLIPI 442
                 55665555566799************999888665 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0    0.0019      0.87       2      81 ..     107     185 ..     106     206 .. 0.77
   2 ?    0.5   0.1       1.6   7.7e+02       1      15 [.     421     435 ..     421     442 .. 0.82
   3 ?   -2.1   0.0        10   4.7e+03      99     128 ..     580     609 ..     560     616 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.0019
                 E-TTSSHHHHHHHHH.HHHTEE.EEEHHHHHHHHHHTTTSHSSHHHHCTSHHHHHHHHHHHHHHHHHHHHHSSEEEEEE-SE CS
      AAA_17   2 GgPGsGKgtqceklv.ekygft.hlsaGdllreeakrgglakardemrklpleekkelqkeaaekiaeeakkkgvlvdghpr 81 
                 G  GsGK+t +e l+ ++++++ h+    ll +ea++    +a +++ k  +e+ ++l  e++e +  +++ ++vl+++++ 
  EPX74386.1 107 GDNGSGKSTFLESLAaRDVEIPeHID-VYLLNAEAEPTDI-NAVEYIIKSAKEKVQKLELEIEE-LSTADDVDDVLLETKYE 185
                 678**********9747788885666.68999**999997.89999999999999998888764.66666778888887764 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 1.6
                 EE-TTSSHHHHHHHH CS
      AAA_17   1 lGgPGsGKgtqcekl 15 
                 +G  G GK+t+++ +
  EPX74386.1 421 VGKNGTGKSTLLNLI 435
                 6889*******9654 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 10
                 HH..SEEEEEE--HHHHHHHHHHHTTST-T CS
      AAA_17  99 elkpdaiilleadpeeilerrlkdrtrgrd 128
                 e+k ++i+ l+++ ee  ++++ + ++ ++
  EPX74386.1 580 EVKDKKIVKLDCNIEEYKKQMAIEVQSHDT 609
                 456678888999999888888776555554 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0       0.2        94      18      45 ..      99     126 ..      95     190 .. 0.73
   2 ?   -0.8   0.0       1.7   8.1e+02     108     139 ..     337     368 ..     269     379 .. 0.68
   3 ?    5.9   0.0     0.015       7.1      15      35 ..     411     431 ..     400     435 .. 0.89

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.2
      ATPase  18 egrvvlitGepGtGKtifalqFlikgae 45 
                 +g+ + + G+ G+GK++f +  + + +e
  EPX74386.1  99 HGQRYGLLGDNGSGKSTFLESLAARDVE 126
                 67888899**********8887777665 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 1.7
      ATPase 108 ieelaeaikeikakrvviDsitglayeekeav 139
                 + + a+ +++ k k+ +iD+ ++   +ek++ 
  EPX74386.1 337 AGTYANLVRQAKSKQKIIDKMEAAGLIEKPEP 368
                 34556778888888889998887766666655 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.015
      ATPase  15 GipegrvvlitGepGtGKtif 35 
                 Gi +++ v i+G+ GtGK+++
  EPX74386.1 411 GIDMDSRVAIVGKNGTGKSTL 431
                 899999************987 PP

>> DAP3  Mitochondrial ribosomal death-associated protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0     0.068        32      23      41 ..     100     118 ..      90     123 .. 0.85
   2 ?   -0.7   0.0       1.3   6.2e+02     215     246 ..     306     336 ..     264     364 .. 0.62
   3 ?    5.0   0.1     0.024        11      24      41 ..     416     433 ..     413     440 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.068
                 --EEEEE-SSSSSTTTTHH CS
        DAP3  23 vkrlvltGekgsGKSvlLl 41 
                  +r+ l G++gsGKS+ L 
  EPX74386.1 100 GQRYGLLGDNGSGKSTFLE 118
                 58999***********985 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 1.3
                 -SS-SS--SS---HHHHHTTTTTGGG-S-E.. CS
        DAP3 215 atsssntpksatlevallqeearpqldpYvkk 246
                   +++++++ ++++ +l+q+e+  ++  +++ 
  EPX74386.1 306 MRTKEENET-NQMKAYLKQQEEIAHIKKFIAG 336
                 333333333.5899999999988888888865 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.024
                 -EEEEE-SSSSSTTTTHH CS
        DAP3  24 krlvltGekgsGKSvlLl 41 
                  r+ + G++g+GKS+lL+
  EPX74386.1 416 SRVAIVGKNGTGKSTLLN 433
                 68999***********97 PP

>> ATP-synt_ab  ATP synthase alpha/beta family, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.0    0.0063         3       7      38 ..      93     124 ..      90     354 .. 0.84
   2 ?    2.4   0.0      0.22   1.1e+02      14      34 ..     415     435 ..     406     461 .. 0.86

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0063
                  HHS-EBTT-EEEEEESTTSSHHHHHHHHHHHS CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab   7 alfpivqGqrtlipgafgvGktvisqslskqs 38 
                  a++ + +Gqr +++g++g Gk++ ++sl+   
   EPX74386.1  93 AVVELNHGQRYGLLGDNGSGKSTFLESLAARD 124
                  5666789********************99873 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.22
                  T-EEEEEESTTSSHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab  14 GqrtlipgafgvGktvisqsl 34 
                    r++i+g++g+Gk+++++ +
   EPX74386.1 415 DSRVAIVGKNGTGKSTLLNLI 435
                  57999***********99766 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.2      0.05        24      24      41 ..     105     122 ..      85     186 .. 0.72
   2 ?    1.7   0.0       0.5   2.3e+02      20      40 ..     416     436 ..     399     447 .. 0.76

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.05
                 EEESTTSSHHHHHHHHHH CS
        TsaE  24 LeGdLGaGKTtlvrglak 41 
                 L Gd G+GK+t+  +la+
  EPX74386.1 105 LLGDNGSGKSTFLESLAA 122
                 666666777666666553 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.5
                 EEEEEEESTTSSHHHHHHHHH CS
        TsaE  20 dvilLeGdLGaGKTtlvrgla 40 
                 + +++ G+ G+GK+tl   + 
  EPX74386.1 416 SRVAIVGKNGTGKSTLLNLIT 436
                 459999**********98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (617 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1137  (0.0634168); expected 358.6 (0.02)
Passed bias filter:                      669  (0.0373138); expected 358.6 (0.02)
Passed Vit filter:                       112  (0.00624686); expected 17.9 (0.001)
Passed Fwd filter:                        38  (0.00211947); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              38  [number of targets reported over threshold]
# CPU time: 0.96u 0.38s 00:00:01.34 Elapsed: 00:00:00.58
# Mc/sec: 3210.73
//
Query:       EPX74387.1  [L=322]
Description: serine/threonine protein phosphatase Ppa2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.7e-34  117.7   0.5    1.5e-33  117.0   0.5    1.2  1  Metallophos      Calcineurin-like phosphoesterase
  ------ inclusion threshold ------
      0.022   15.2   0.1      0.049   14.1   0.1    1.5  1  STPPase_N        Serine-threonine protein phosphatase N-termi
      0.029   14.0   0.0      0.043   13.4   0.0    1.2  1  Glyco_hydro_65N  Glycosyl hydrolase family 65, N-terminal dom


Domain annotation for each model (and alignments):
>> Metallophos  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.0   0.5   2.5e-37   1.5e-33       2     201 ..      64     255 ..      64     258 .. 0.93

  Alignments for each domain:
  == domain 1  score: 117.0 bits;  conditional E-value: 2.5e-37
                  EEEEEESBTBTTCCTHHHHHHHHHHHH..HHHTTESEEEEESTSSSSS..HHHHHHHHHHHHHHHHTSEEEEEC-TTS........CHHHHHHHHHHH CS
  Metallophos   2 rilvigDlHlalgggqlddllkllddl..lreekpdlvllaGDlvdrg..dlekellellaalvkypipvylllGNHe........gfeeellnkygy 87 
                  +++v+gD+H     gq++dl++l++     ++  ++l++  GD+vdrg  ++e+ +  l+a ++++p+++ +l+GNHe        gf++e+l+kyg+
   EPX74387.1  64 PVTVCGDIH-----GQFHDLMELFKIGgeVPD-MNYLFM--GDYVDRGyhSVET-VSLLVAMKLRFPHRITILRGNHEsrqitqvyGFYDECLRKYGS 152
                  589******.....**********77764445.899999..*******767777.77779999999*******************************9 PP

                  HHHHHHHHEHHHCEEETSEEEEEETTEEEEEEEESE.CEEETHHHHHHHHHHHSCHHHHCC...HHHHHHHHHHTTCSEEEEEESSESSCSSSCSCCH CS
  Metallophos  88 lgifsepwrsdaevfnnlplaslgsgslkvlllhGg.spellvsldklgslnleleapepg...dewlkdlekrekadwvivlgHsplyrgsgylfgd 181
                      +++w+++++ f+++pl +l+++  ++++lhGg sp + +sld+++sl++ +e+p++g   d++++d        ++   g+   +rg+gy+fg+
   EPX74387.1 153 ----ANVWKHFTNLFDYFPLTALIED--RIFCLHGGlSPSI-DSLDQIRSLDRVQEVPHEGpmcDLLWSD--------PDDRCGWGISPRGAGYTFGQ 235
                  ....889*******************..********77777.****************************........99999999999********* PP

                  HHHHHHHHHTTESEEEEESS CS
  Metallophos 182 ealedllkkygvdlvisGHt 201
                  +  e +   +g+ l  ++H+
   EPX74387.1 236 DISESFNHANGLSLTARAHQ 255
                  ******99999999999997 PP

>> STPPase_N  Serine-threonine protein phosphatase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.1   8.2e-06     0.049      21      41 ..      35      55 ..      21      57 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 8.2e-06
   STPPase_N 21 qLseaEIrqlCakareiFLsQ 41
                +Lse+++++lC ka+e++ ++
  EPX74387.1 35 PLSESDVEALCEKAKEVLCRE 55
                5****************9765 PP

>> Glyco_hydro_65N  Glycosyl hydrolase family 65, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   7.2e-06     0.043      26      85 ..     127     181 ..     125     197 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 7.2e-06
                      E----TTTT--.-EEETT-EE-T........TSSS-EE----EEEEEEEEETTEE--GGG CS
  Glyco_hydro_65N  26 tRgafeeeysdpgtyiaGvYdreiseeanGypeeneelvnlpdwlglrlrvdgeeldlde 85 
                      +Rg++e     + t + G+Yd+     ++G ++++++  nl d+ +l+  +++  + l  
       EPX74387.1 127 LRGNHES--R-QITQVYGFYDEC--LRKYGSANVWKHFTNLFDYFPLTALIEDRIFCLHG 181
                      5999999..4.59*******999..68**************************8888864 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       485  (0.0270511); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.31s 00:00:00.93 Elapsed: 00:00:00.52
# Mc/sec: 1851.81
//
Query:       EPX74388.1  [L=237]
Description: ubiquinol-cytochrome-c reductase complex subunit 5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.6e-11   42.5   0.0    8.3e-11   41.7   0.0    1.4  1  Rieske    Rieske [2Fe-2S] domain
    6.5e-10   39.3   2.2    2.1e-09   37.7   0.2    2.4  2  UCR_TM    Ubiquinol cytochrome reductase transmembrane region


Domain annotation for each model (and alignments):
>> Rieske  Rieske [2Fe-2S] domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.7   0.0   9.3e-15   8.3e-11      32      85 ..     162     222 ..     116     227 .. 0.69

  Alignments for each domain:
  == domain 1  score: 41.7 bits;  conditional E-value: 9.3e-15
                 T........TS-EEEEESC-TTTT-BCGGSEEETT.EEE-TTT--EEETTSBEEE-TTHHHE CS
      Rieske  32 e........dgevyAlsdvCtHrgaplsegkidekgvleCpcHgwaydadGkvikgPaprpl 85 
                          + e+ ++ +vCtH+g+ + ++++d +    CpcHg+ yd +G+++ gPap +l
  EPX74388.1 162 PqadsdrvqKPEWLVMIGVCTHLGCVPIGEAGDYG-GWFCPCHGSHYDISGRIRRGPAPINL 222
                 13444444478888*************99777545.677*******************9886 PP

>> UCR_TM  Ubiquinol cytochrome reductase transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.1     0.084   7.5e+02      41      61 ..      22      42 ..      10      46 .. 0.82
   2 !   37.7   0.2   2.3e-13   2.1e-09       5      66 .]      57     109 ..      54     109 .. 0.90

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.084
      UCR_TM 41 ggavvgayaaKsvVqkfvssm 61
                  +v++ + a+s+V+  v + 
  EPX74388.1 22 SSSVASQSLARSAVNSAVNTS 42
                567889999999999999875 PP

  == domain 2  score: 37.7 bits;  conditional E-value: 2.3e-13
      UCR_TM   5 kvPdfsdyrresvkDpskssretedeRkaftylvlaggavvgayaaKsvVqkfvssmsASAD 66 
                 ++Pdfs+y+ +s          + d  ++++y+++++ ++++a +a ++V++f+ s+sASAD
  EPX74388.1  57 EIPDFSEYQTKSS---------SGDRSRVVSYAMVGTLGALTAAGAQATVHDFLASWSASAD 109
                 58*******9983.........34555**********************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       480  (0.0267723); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1715.48
//
Query:       EPX74389.1  [L=166]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.8e-16   59.9   0.0    5.2e-16   59.4   0.0    1.2  1  DUF3807      Protein of unknown function (DUF3807)
  ------ inclusion threshold ------
      0.019   15.3   1.5      0.046   14.0   1.5    1.6  1  GEMIN8       Gemini of Cajal bodies-associated protein 8
      0.023   15.5   0.4        1.1   10.1   0.3    2.3  2  ANAPC_CDC26  Anaphase-promoting complex APC subunit CDC26


Domain annotation for each model (and alignments):
>> DUF3807  Protein of unknown function (DUF3807)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.4   0.0   8.8e-20   5.2e-16       1      91 [.       7     100 ..       7     120 .. 0.75

  Alignments for each domain:
  == domain 1  score: 59.4 bits;  conditional E-value: 8.8e-20
     DUF3807   1 DLqaFhakHFseastdhfesqfleeeeeaeeeeydeedD...gLGYYpDGvKRTLTDeQIaiFRHSEieallRereleeeesekekkeeeeeee 91 
                 DLq+Fh++HF + +++  e+ fl+   + +  + ++e+        YpDG  RTLTDeQI  FR SE+ +l  +re+e+  +ekek +++++++
  EPX74389.1   7 DLQKFHDEHFGKVAVQCWENAFLQPPVDLNVSYPYNENPtfsAVERYPDGSIRTLTDEQISYFRESELRELEWKREKEQFMQEKEKAAKAHAQT 100
                 9**********************65555555555666641114568*************************99999777775544444333333 PP

>> GEMIN8  Gemini of Cajal bodies-associated protein 8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   1.5   7.7e-06     0.046     128     229 ..      61     164 ..      50     165 .. 0.62

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 7.7e-06
      GEMIN8 128 iteelRqyfaeterHreErrr.qqqldaerl...ddyvnadedliykkkrsveppverpgerrqaemkklygdsAakIqamEtavqlsFdkncdkkqpk 222
                 +t+e   yf e+e    E +r ++q   e+    + + + +   ++ ++ +   p+   ++      ++lyg s   I ++E  ++ sF k  +  + k
  EPX74389.1  61 LTDEQISYFRESELRELEWKReKEQFMQEKEkaaKAHAQTSIAASVPESEPN-IPMCLQESLPLDSYRNLYGYSYHDILELEQILDNSFQKFTAV-RTK 157
                 5666666777777655555554223222222111333333333333333333.3344444555556678********************998877.99* PP

      GEMIN8 223 yWpviPL 229
                 yWp iP+
  EPX74389.1 158 YWPSIPI 164
                 ******7 PP

>> ANAPC_CDC26  Anaphase-promoting complex APC subunit CDC26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.032   1.9e+02      11      23 ..       3      15 ..       2      23 .. 0.89
   2 ?   10.1   0.3   0.00019       1.1      10      48 ..      60     106 ..      60     129 .. 0.73

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.032
  ANAPC_CDC26 11 LtseDiaeyeder 23
                 Lt+eD++++ de+
   EPX74389.1  3 LTEEDLQKFHDEH 15
                 9********9984 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00019
  ANAPC_CDC26  10 tLtseDiaeyede........rqrqkeqaaqqqrsqasastsqasdt 48 
                  tLt e i+++ ++        r++++ +++++++++a+a ts a++ 
   EPX74389.1  60 TLTDEQISYFRESelrelewkREKEQFMQEKEKAAKAHAQTSIAASV 106
                  68888888888888888887799999999999999998888766654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1076  (0.0600145); expected 358.6 (0.02)
Passed bias filter:                      636  (0.0354733); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.30s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 1074.54
//
Query:       EPX74390.1  [L=461]
Description: cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.1e-42  143.2   0.0    1.8e-41  142.1   0.0    1.6  1  Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans iso


Domain annotation for each model (and alignments):
>> Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.1   0.0   9.8e-46   1.8e-41       3     157 ..      16     165 ..      14     166 .. 0.89

  Alignments for each domain:
  == domain 1  score: 142.1 bits;  conditional E-value: 9.8e-46
  Pro_isomerase   3 dietsskGrivieLfadkaPktvenFlklvkegfYdgttFhRvikgfmvqgGdptgktsageqekkggesiraipdEitsklkh.krGalamartg 97 
                     ++t  +G+i++eL  ++aPk+++nFl+l+ eg+Yd+t+FhRv+++f++qgGdptg++  g+  +    +++a+p E +++l++ +rG+l+ma ++
     EPX74390.1  16 VFKTT-RGDIQLELWCNEAPKACRNFLQLCMEGYYDNTIFHRVVPNFLIQGGDPTGTGMGGQ--SI---YEEAFPIETHPRLRFmRRGLLGMASAE 105
                    68895.**************************************************955222..23...3369******666666*********95 PP

  Pro_isomerase  98 kepnsagsqFfItlkeaphldgkytvFGkVv.eGmdvvekiekvetde.erpkknvkivsae 157
                       + ++sqFfItl+++p+l+gk t FG+Vv e +  v +i+++e d+ erp  + ki sae
     EPX74390.1 106 --DEGNQSQFFITLGPTPELNGKQTLFGRVVgETIYNVVRISELELDAdERPLYPPKILSAE 165
                    ..799***************************88888889***9999999********9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (461 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1409  (0.0785878); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.41
# Mc/sec: 3358.45
//
Query:       EPX74391.1  [L=193]
Description: pho88 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-60  203.0   0.7    2.7e-60  202.7   0.7    1.0  1  Pho88     Phosphate transport (Pho88)


Domain annotation for each model (and alignments):
>> Pho88  Phosphate transport (Pho88)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  202.7   0.7   1.5e-64   2.7e-60       2     177 ..      11     187 ..      10     191 .. 0.97

  Alignments for each domain:
  == domain 1  score: 202.7 bits;  conditional E-value: 1.5e-64
       Pho88   2 npqvtnlviilvlmqvskkidfedpevllyvRilYvvsqliillvylyikskikkknDlttlkyvepasplske.eeklvttTvkdYDlaelkkllksi 99 
                 npqv++++i+ vlm ++k idf++p  ll +Ri+Y++++l+++++++y+++ i+kknDlt++kyvepa+p+s++ + k+ +tTv++YDl++l +++k++
  EPX74391.1  11 NPQVKSIAITGVLMSLTKVIDFSKPYLLLPLRIAYAAVTLLQIGLFYYTRTIIQKKNDLTVMKYVEPATPISGReHAKFIATTVREYDLNKLLASFKQM 109
                 8***********************************************************************99899999******************* PP

       Pho88 100 lmgvammafmhlymkytnPLllQsimplknllesnlvkihllgkpaegdLkRPFkaaagllgaa.eaktdkksiekaek 177
                 l++++ ++fmhlym+y++PLl+Q +++++++l++n++kih+l+kpa++dLkRPFk +agll +  ++ tdk+s++ ae 
  EPX74391.1 110 LVTIGTTMFMHLYMGYAPPLLFQLVSAVRGFLDENEMKIHILNKPATDDLKRPFK-SAGLLASYgQVLTDKRSVDDAEV 187
                 *******************************************************.899997778**********9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       470  (0.0262145); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.27s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 1337.71
//
Query:       EPX74392.1  [L=624]
Description: SUMO E1-like activator enzyme Fub2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-69  234.2   0.2    1.9e-69  233.7   0.2    1.1  1  ThiF             ThiF family
    1.7e-12   47.8   0.5    4.1e-07   30.2   0.0    2.3  2  UBA_e1_thiolCys  Ubiquitin-activating enzyme active site
    1.4e-06   28.8   0.1    3.1e-06   27.7   0.1    1.6  1  UAE_UbL          Ubiquitin/SUMO-activating enzyme ubiquitin-l
    0.00068   19.7   0.1     0.0017   18.4   0.1    1.6  1  Shikimate_DH     Shikimate / quinate 5-dehydrogenase
     0.0034   17.8   1.8      0.014   15.8   0.0    2.9  4  NAD_binding_7    Putative NAD(P)-binding
  ------ inclusion threshold ------
      0.015   14.4   0.6      0.043   12.9   0.0    2.0  3  Polysacc_synt_2  Polysaccharide biosynthesis protein
      0.095   13.0   0.1       0.31   11.3   0.1    1.9  1  Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding doma
       0.38   10.6   5.0         12    5.7   2.8    2.6  2  DivIC            Septum formation initiator
       0.52   10.3   5.6        3.4    7.7   2.0    2.5  2  CENP-F_leu_zip   Leucine-rich repeats of kinetochore protein 


Domain annotation for each model (and alignments):
>> ThiF  ThiF family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  233.7   0.2   9.5e-73   1.9e-69      11     237 ..      12     422 ..       4     430 .. 0.95

  Alignments for each domain:
  == domain 1  score: 233.7 bits;  conditional E-value: 9.5e-73
                 HHHHHHHTSEEEEE--SHHHHHHHHHHHHHTTTEEEEEESSB--GGGGGTBTTS-GGGTTSBHHHHHHHHHHHT-TTSEEEEEES-CCGCCS-HHHHTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        ThiF  11 dgqekLrdskvllvGaGglGsellknLalsGvgkltlvDnDkielsNlnRqflfreediGkpKaevaaealqeinpdveveavteritdetvleelles 109
                 + +++ ++skvllvGaGg+G+ellknL +s v+++ ++D D+i+lsNlnRqflfr+++++++Ka va + +q++np+v++ea++++i++  ++ +++++
  EPX74392.1  12 EALRRFQESKVLLVGAGGIGCELLKNLLMSNVREICIIDLDTIDLSNLNRQFLFRKHHVKQAKAIVAMKTAQSFNPNVKIEAIQANIKEPRFNISWFRQ 110
                 67889999*******************************************************************************99889******* PP

                 -SEEEEESSSHHHHHHHHHHHHHHT-EEEEEEEETTEEEEEEEEECCS-ECTSS-TGGS.EECCCCEEHHH............................ CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............................ RF
        ThiF 110 vDlVvdalDniearrlvnracvkkgiplieagtlgfegqvvviipgktgcyeCldpsstedptekkvplct............................ 180
                 + +V++alDn++arr+vn++c    ipl+e+gt gf gqv+vi++gkt+cy+C++     +++ k +p+ct                            
  EPX74392.1 111 FGMVFNALDNLDARRHVNKLCLLANIPLVESGTTGFLGQVQVIAHGKTECYDCNP-----KQQAKVYPVCTirstpsqpihcivwaksyffpqlfgdne 204
                 ******************************************************5.....7889999999999************************** PP

                 ................................................................................................... CS
                 ................................................................................................... RF
        ThiF 181 ................................................................................................... 180
                                                                                                                    
  EPX74392.1 205 endegiqniaqneaqkkeieelaretaelaelrnslvtdsnafekifekiyhrdiarlravpdmwtyrtaptvldlnelgqkavhlsspwldeqkiwtl 303
                 *************************************************************************************************** PP

                 .............................................................HHHCT.E-B-HHHHHHHHHHHHHHHHHHHTTBCGGGCC CS
                 .............................................................xxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        ThiF 181 .............................................................siagn.ipaiatttavvaglaalellkllsgkeklens 217
                                                                              ++agn ipaiatt+av+agl+++++lk+ ++ ++  ++
  EPX74392.1 304 eenfavlkssiqrlsqrlkncnseglsfdkddkdtmdfvaasanlraysfgieqhsefdikQMAGNiIPAIATTNAVIAGLCVTQALKVYQNDNDELKN 402
                 ******************************************************************************************988889999 PP

                 EEEECCTTTTEEEEECCEEE CS
                 xxxxxxxxxxxxxxxxxxxx RF
        ThiF 218 lltqvdllesrfenvelera 237
                 ++   ++ + ++ +  ++++
  EPX74392.1 403 VFMAKRADRVFHGEKVCKPN 422
                 99666666555555554444 PP

>> UBA_e1_thiolCys  Ubiquitin-activating enzyme active site
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.1   5.1e-06      0.01       1      69 [.     181     249 ..     181     267 .. 0.68
   2 !   30.2   0.0     2e-10   4.1e-07     188     252 .]     304     364 ..     273     364 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 5.1e-06
  UBA_e1_thiolCys   1 PneieHtieWArdkF.eglFekkpeevnkflkdkekfleelekekeeekletlekvlkllvkerpktfed 69 
                      P++  H+i WA+++F  +lF ++ e+ + + +  ++ +++ e e+ + +++ l +++++l   + + fe+
       EPX74392.1 181 PSQPIHCIVWAKSYFfPQLFGDNEENDEGIQNIAQNEAQKKEIEELARETAELAELRNSL-VTDSNAFEK 249
                      8999********975278888888877777755555555555555555566799999999.455555554 PP

  == domain 2  score: 30.2 bits;  conditional E-value: 2e-10
  UBA_e1_thiolCys 188 eeeleelaeeleklakkesslalklkpieFeKDddtnfhidfitaasNlRArnYkIkeadrlkvK 252
                      ee++  l+++++ l+++ ++   + + ++F+KDd++   +df++a +NlRA  ++I++ +++++K
       EPX74392.1 304 EENFAVLKSSIQRLSQRLKN--CNSEGLSFDKDDKD--TMDFVAASANLRAYSFGIEQHSEFDIK 364
                      34455556666665444444..58999*******99..7*******************9988876 PP

>> UAE_UbL  Ubiquitin/SUMO-activating enzyme ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   0.1   1.5e-09   3.1e-06       3      69 ..     437     498 ..     435     505 .. 0.86

  Alignments for each domain:
  == domain 1  score: 27.7 bits;  conditional E-value: 1.5e-09
     UAE_UbL   3 vdlskatlgdLvekvlkkeLgleepevsvnggatilYlsseedeeeddnldkkLaelgik..ngsiLtv 69 
                 vd  ++ l+d+v+ +l   L ++e evsv  +++++Y     d++ +dn + +La+lgi+  n+++Lt+
  EPX74392.1 437 VDHYRLLLKDFVKYILHDFLRYSE-EVSV-IKEDLIY-----DVDFEDNCESTLADLGISgnNNTVLTI 498
                 6778899*****************.8888.89*****.....****************97224567776 PP

>> Shikimate_DH  Shikimate / quinate 5-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.1   8.5e-07    0.0017       8      56 ..      15      63 ..      11      82 .. 0.80

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 8.5e-07
                  S..TT-EEEEES-SHHHHHHHHHHHCCT-CEEEEEESSHHHHHHHHHHH CS
  Shikimate_DH  8 eslkekkvlliGaGemaelvakhLlakgvkkvvvaNRtlerakelaeel 56
                   +++e+kvll+GaG ++ +++k+Ll ++v++++++  +    ++l +++
    EPX74392.1 15 RRFQESKVLLVGAGGIGCELLKNLLMSNVREICIIDLDTIDLSNLNRQF 63
                  56789*****************************986666666666665 PP

>> NAD_binding_7  Putative NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0     7e-06     0.014       4      88 ..      16     137 ..      14     143 .. 0.73
   2 ?   -3.4   0.0         7   1.4e+04      72      84 ..     217     229 ..     200     245 .. 0.61
   3 ?   -1.1   0.1       1.3   2.6e+03      59     100 ..     363     403 ..     297     406 .. 0.59
   4 ?   -3.2   0.0         6   1.2e+04      25      42 ..     454     471 ..     452     496 .. 0.69

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 7e-06
  NAD_binding_7   4 dlkgkkvlvvGgGevAarkvrklleag.akvtvvapevkeele.................................elvklaeee.....le.kdl 59 
                    ++++ kvl+vG+G ++ + +++ll ++  ++ +++ ++ + ++                                 e +++   +     ++ +++
     EPX74392.1  16 RFQESKVLLVGAGGIGCELLKNLLMSNvREICIIDLDTIDLSNlnrqflfrkhhvkqakaivamktaqsfnpnvkiEAIQA---NikeprFNiSWF 108
                    57899*******************988678*******63333366666666666666666666666666665544433333...133333544789 PP

  NAD_binding_7  60 egadlviaatddrelneriaeaakarril 88 
                     ++ +v+ a d+ + ++++ +++  ++i+
     EPX74392.1 109 RQFGMVFNALDNLDARRHVNKLCLLANIP 137
                    9999*******************888886 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 7
  NAD_binding_7  72 relneriaeaaka 84 
                    ++ +++i e+a++
     EPX74392.1 217 EAQKKEIEELARE 229
                    4444444444443 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 1.3
  NAD_binding_7  59 legad.lviaatddrelneriaeaakarrilvnvadkpelcdf 100
                    +++++  +i a+  +  n+ ia ++ ++ + v   d+ el ++
     EPX74392.1 363 IKQMAgNIIPAI--ATTNAVIAGLCVTQALKVYQNDNDELKNV 403
                    333333344444..45566667777666666666666666655 PP

  == domain 4  score: -3.2 bits;  conditional E-value: 6
  NAD_binding_7  25 klleagakvtvvapevke 42 
                     +l+++ +v v+ +++ +
     EPX74392.1 454 DFLRYSEEVSVIKEDLIY 471
                    678888888888888633 PP

>> Polysacc_synt_2  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   2.2e-05     0.043       1      60 [.      22      76 ..      22      96 .. 0.74
   2 ?   -2.9   0.0       1.4   2.8e+03      39      70 ..     213     243 ..     199     272 .. 0.46
   3 ?   -2.3   0.0      0.97   1.9e+03      64      83 ..     395     414 ..     344     425 .. 0.62

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2.2e-05
                     EEEETTTSHHHHHHHHHHHHHB-SEEEEEES-HHHHHHHHHH......-TTEEEE....E CS
  Polysacc_synt_2  1 vlvtGagGsiGselvrqilkkkpkkiillerdElklyeiekeleeelkkkklkveivpvi 60
                     vl+ GagG iG el++++l +++++i +++ d   l ++++++   ++k+++k   ++ i
       EPX74392.1 22 VLLVGAGG-IGCELLKNLLMSNVREICIIDLDTIDLSNLNRQFL--FRKHHVKQ--AKAI 76
                     56777766.********************************953..33333322..2333 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.4
                      HHHH......-TTEEEE....E--TT-HHHHH CS
  Polysacc_synt_2  39 iekeleeelkkkklkveivpvigdvrdkerle 70 
                      i+++  ++++ ++l    ++ ++++r++   +
       EPX74392.1 213 IAQNEAQKKEIEELAR-ETAELAELRNSLVTD 243
                      3333333333333322.244455544444333 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 0.97
                      T-HHHHHHHTT..T-SEEEE CS
  Polysacc_synt_2  64 rdkerlekaleelkvdvvfh 83 
                      +d+++l++++ + + d vfh
       EPX74392.1 395 NDNDELKNVFMAKRADRVFH 414
                      57788999999899999998 PP

>> Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   0.00016      0.31       1      89 [.      22     131 ..      22     170 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00016
                      EEEE--SHHHHHHHHHHHCTCCT-GEEEEEESSHHHHHHHHCHH.......................TTTCEEEEE--TTTHHHHHHHHHTTSS CS
  Sacchrp_dh_NADP   1 vliiGaGsvGqavaellarhfdvdaeitvadrskeklealaaka.......................lgvrfeaialdaenyeavLaallkegd 71 
                      vl++GaG++G  +++ l+ ++    ei+++d +   l +l  +                         +v++eai+ ++++++    +  ++ +
       EPX74392.1  22 VLLVGAGGIGCELLKNLLMSNVR--EICIIDLDTIDLSNLNRQFlfrkhhvkqakaivamktaqsfnPNVKIEAIQANIKEPRF-NISWFRQFG 112
                      799****************9866..********999999988777776666666666666666665555555555555555555.445566666 PP

                      EEEE-SSGG.GHHHHHHHH CS
  Sacchrp_dh_NADP  72 lvvnlsppi.ssldvlkaC 89 
                      +v n++ +    + v k+C
       EPX74392.1 113 MVFNALDNLdARRHVNKLC 131
                      6666666664444555555 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   2.8    0.0061        12      24      59 ..     214     249 ..     206     250 .. 0.77
   2 ?    3.9   0.0     0.022        44      24      50 ..     298     324 ..     290     336 .. 0.69

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0061
                 HHHHHHHHHHHHHHHHHHHHHHHHCC-XXXXXXXXX CS
       DivIC  24 qeiaalqaelaklkaeneeLeaevkdLksdedyiee 59 
                 ++ +a+++e+++l  e +eL++  + L  d ++ e+
  EPX74392.1 214 AQNEAQKKEIEELARETAELAELRNSLVTDSNAFEK 249
                 677888999999999999998888888667666665 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.022
                 HHHHHHHHHHHHHHHHHHHHHHHHCC- CS
       DivIC  24 qeiaalqaelaklkaeneeLeaevkdL 50 
                 q+i +l+++ a lk  +++L +++k+ 
  EPX74392.1 298 QKIWTLEENFAVLKSSIQRLSQRLKNC 324
                 666666666666666666666666665 PP

>> CENP-F_leu_zip  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   2.0    0.0017       3.4      37      76 ..     204     245 ..     201     254 .. 0.79
   2 ?    3.2   0.1     0.042        84      54      85 ..     300     331 ..     296     341 .. 0.81

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0017
  CENP-F_leu_zip  37 eenqe..kvileaEtskaevetlkeeieelaeelreleldLv 76 
                     een e  + i + E +k+e+e+l  e  elae ++ l +d +
      EPX74392.1 204 EENDEgiQNIAQNEAQKKEIEELARETAELAELRNSLVTDSN 245
                     555552245889*******************99999887755 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.042
  CENP-F_leu_zip  54 vetlkeeieelaeelreleldLvalrsekeeL 85 
                     + tl+e+   l+++ ++l++ L+++ se  + 
      EPX74392.1 300 IWTLEENFAVLKSSIQRLSQRLKNCNSEGLSF 331
                     66899999999999999999999999986555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (624 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1017  (0.0567237); expected 358.6 (0.02)
Passed bias filter:                      687  (0.0383178); expected 358.6 (0.02)
Passed Vit filter:                        70  (0.00390429); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.66u 0.29s 00:00:00.95 Elapsed: 00:00:00.43
# Mc/sec: 4338.28
//
Query:       EPX74393.1  [L=945]
Description: 6-phosphofructokinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.4e-186  617.7   3.5   9.1e-106  353.3   1.0    2.2  2  PFK       Phosphofructokinase
    3.5e-05   24.1   0.1    7.7e-05   23.0   0.1    1.5  1  Pfk_N     Phosphofructokinase N-terminal domain yeast
  ------ inclusion threshold ------
      0.025   14.2   0.4          1    9.0   0.1    2.9  3  DAGK_cat  Diacylglycerol kinase catalytic domain


Domain annotation for each model (and alignments):
>> PFK  Phosphofructokinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  353.3   1.0  1.5e-109  9.1e-106       1     283 [.     199     506 ..     199     507 .. 0.98
   2 !  264.9   0.1   1.3e-82   7.8e-79       1     282 [.     588     876 ..     588     878 .. 0.93

  Alignments for each domain:
  == domain 1  score: 353.3 bits;  conditional E-value: 1.5e-109
                 EEEEEEESS--TTHHHHHHHHHHHHHHTT-EEEEETTHHHHHHTT..-EEEE-SGGGTT-TT--S-TT-----GGGGSHHHHHHHHHHHHHHT--EEEE CS
         PFK   1 riailtsGGdapGmNaairavvrtaikkglevygireGfeGliee..eiekltledvsgilsegGtiLgsaRskefkeregrkkaaenlkklgidaLvv 97 
                 +ia++tsGGdapGmNaa+rav+r+ai++g++ ++++eG+eGl+++   i++l + dv+g+l+egGt++g+aR+ +f+er gr +aa+nl   gid L+v
  EPX74393.1 199 KIAVMTSGGDAPGMNAAVRAVARYAIHRGCDAFAVYEGYEGLVQGgdMIRQLAWGDVRGWLAEGGTLIGTARCMSFRERAGRLRAAKNLISAGIDSLIV 297
                 7*******************************************997788************************************************* PP

                 EESHHHHHHHHHHHHT..T.....................--EEEEEEETT---TT-S--EEHHHHHHHHHHHHHHHHHHHHHHT-EEEEEES-TT-TH CS
         PFK  98 iGGdgslkganklseerkgllee.................lkivgiPkTidNDipgtdytiGfdTAlntiveaidklkstakshkrvfvvEvmGrncGw 179
                 +GGdgsl+ga+ +++ ++gl++e                 l+ivg++++idND+  td+tiG+ ++l++i+ea+d+++sta sh+r+fvvEvmGr+cGw
  EPX74393.1 298 CGGDGSLTGADLFRSDWPGLVQEledtkaitveqanlyrhLTIVGLVGSIDNDMSSTDVTIGAFSSLHRICEAVDSISSTAISHSRAFVVEVMGRHCGW 396
                 *********************99**************************************************************************** PP

                 HHHHHHHHHT-SEEE-TTS---HH....HHHHHHHHHHT.T-S-EEEEEESSS..S-.....HHHHHHHHHHHHSS-EEEEE-GGGGG-S---HHHHHH CS
         PFK 180 lAlmaglaggadvilipEepfdie....eliekikklrkkgkkksiivvaEgakdkeg..iiaeelakeieektgievrvtvlGhlqrGgspsafDril 272
                 lA+ a+la+gad++++pE+p ++     e+++++   rk+gk+ksii+vaEga+d+e   i+ae+++k+++e+ ++++rvt+lGh+qrGg p+a+Dr+l
  EPX74393.1 397 LAVLAALATGADFVFVPERPAQVGkwqeEMCNALSAFRKEGKRKSIIIVAEGAIDSELnhITAEDIKKLLSERVHLDTRVTTLGHVQRGGVPCAYDRML 495
                 *********************99888899*************************766578************9************************** PP

                 HHHHHHHHHHH CS
         PFK 273 atrlGikavel 283
                 at+ G+ av++
  EPX74393.1 496 ATLQGVDAVDA 506
                 *********97 PP

  == domain 2  score: 264.9 bits;  conditional E-value: 1.3e-82
                 EEEEEEESS--TTHHHHHHHHHHHHHHTT-EEEEETTHHHHHHTT.-EEEE-SGGGTT-TT--S-TT-----GGGGSHHHHHHHHHHHHHHT--EEEEE CS
         PFK   1 riailtsGGdapGmNaairavvrtaikkglevygireGfeGliee.eiekltledvsgilsegGtiLgsaRskefkeregrkkaaenlkklgidaLvvi 98 
                 r+ai+++G++a GmN+a+ra+vr+++++g+++++i +Gf+G++++ +i++l++ dv+++  +gG+ +g++R  +     ++ ++a ++++++id+L+++
  EPX74393.1 588 RVAIVHVGAPAGGMNSATRAAVRYCLNRGHTPLAIDNGFSGFLRHdSIHELSWIDVDEWCIRGGSEIGTNRDTPDL---DMGHCAYKFQQHKIDGLIIV 683
                 79****************************************9997888*************************64...49****************** PP

                 ESHHHHHHHHHHHHT..T.....--EEEEEEETT---TT-S--EEHHHHHHHHHHHHHHHHHHHHHH.T-EEEEEES-TT-THHHHHHHHHHT-SEEE- CS
         PFK  99 GGdgslkganklseerkgllee.lkivgiPkTidNDipgtdytiGfdTAlntiveaidklkstaksh.krvfvvEvmGrncGwlAlmaglaggadvili 195
                 GG+++++++++l+++r +++++ +++  iP+Ti+N++pgt++++G+dT+ln ++e++d +k++a+++ +rvfv Ev+G+++G++A+++gl +ga +i++
  EPX74393.1 684 GGFEAFTALSQLEHARVNYPSFrIPMATIPATISNNVPGTEFSLGCDTCLNSVMEYCDTIKQSASASrRRVFVCEVQGGKSGYVATVGGLITGASAIYT 782
                 ****************9999878*****************************************9999******************************* PP

                 TTS---HHHHHHHHHHHH.....T.T-S-E..EEEEESSS..S-...HHHHHHHHHHHHSS..-EEEEE-GGGGG-S---HHHHHHHHHHHHHHHH CS
         PFK 196 pEepfdieeliekikklr.....kkgkkks..iivvaEgakdkegiiaeelakeieektgi..evrvtvlGhlqrGgspsafDrilatrlGikave 282
                 pE+ ++++ l ++i++l+     + g++++  +i+++E a++   ++++ + + i+e++++  ++r++++Gh+q+Gg+p+++Dr  a rl+++ ++
  EPX74393.1 783 PEDGITLDMLRADIDHLKqtfamEAGRNRAgqLILRNECASK--VYTTDVIGDIISEEAKHrfSARTAIPGHVQQGGNPTPMDRARAARLAMRTIR 876
                 ****************9988877445444467********85..4678889999955444345****************************99876 PP

>> Pfk_N  Phosphofructokinase N-terminal domain yeast
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.1   1.3e-08   7.7e-05       2      59 ..       8      62 ..       7      77 .. 0.85

  Alignments for each domain:
  == domain 1  score: 23.0 bits;  conditional E-value: 1.3e-08
       Pfk_N  2 gvsftslvtnkeekyeelikfYkklGfkvvksyskeantkselkGvstdslkeiWles 59
                g+s  slv+++e  y+e++kfY+klGf+ +  +  +    ++   v ++s++e Wl+ 
  EPX74393.1  8 GISCYSLVASSEGAYDETLKFYQKLGFQKLAFFGISD---THNVRVCNNSVREDWLHV 62
                78999*************************9998665...44466999*******975 PP

>> DAGK_cat  Diacylglycerol kinase catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.46   2.8e+03       7      65 ..     150     208 ..     149     220 .. 0.58
   2 ?    9.0   0.1   0.00017         1      43      68 ..     279     304 ..     243     307 .. 0.79
   3 ?    1.7   0.0     0.032   1.9e+02      44      94 ..     665     718 ..     653     749 .. 0.72

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.46
                 -TTCTTTTHHHHHHHCHHHHHHCTCEEEEEE--STTHHHHHHHHHHH.CC-SEEEEEESH CS
    DAGK_cat   7 NpksGkgkgekllrkvrelleeagvelelieteepgdakelakeake.egvdlivvaGGD 65 
                 Np +  +  +++ + v++++++ g ++ l   +++ + ++ +++a   ++  +++  GGD
  EPX74393.1 150 NPFAHANMKKSVESGVQSHMTS-GTSTPLDAIKKATEPTNATTKAPGvKKKIAVMTSGGD 208
                 6776544444444677777763.4445555555555444444444431234788889998 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00017
                 HHHHHHHHHHHCC-SEEEEEESHHHH CS
    DAGK_cat  43 dakelakeakeegvdlivvaGGDGtv 68 
                    + ak++ ++g+d ++v+GGDG +
  EPX74393.1 279 GRLRAAKNLISAGIDSLIVCGGDGSL 304
                 4566788888889***********87 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.032
                 HHHHHHHHHHCC-SEEEEEESHHHHHHHHHHHCT.......HHCTTSEEEEEE-SS-- CS
    DAGK_cat  44 akelakeakeegvdlivvaGGDGtvsevlnglle.......elatkpplgiiPlGtgN 94 
                   ++a + +++++d+++++GG     e++ +l +         + ++p+++iP+   N
  EPX74393.1 665 MGHCAYKFQQHKIDGLIIVGG----FEAFTALSQleharvnYPSFRIPMATIPATISN 718
                 567899999999********9....566666666433433333334888888875555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (945 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       487  (0.0271627); expected 358.6 (0.02)
Passed bias filter:                      452  (0.0252106); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.69u 0.28s 00:00:00.97 Elapsed: 00:00:00.44
# Mc/sec: 6389.77
//
Query:       EPX74394.1  [L=162]
Description: DNA polymerase delta subunit Cdm1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.8e-43  147.0   0.8    5.1e-43  146.5   0.8    1.2  1  DNA_pol_delta_4  DNA polymerase delta, subunit 4


Domain annotation for each model (and alignments):
>> DNA_pol_delta_4  DNA polymerase delta, subunit 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  146.5   0.8   2.8e-47   5.1e-43       1     130 [.      21     150 ..      21     151 .. 0.98

  Alignments for each domain:
  == domain 1  score: 146.5 bits;  conditional E-value: 2.8e-47
  DNA_pol_delta_4   1 vekvvrkkekesevdkekkvssaekeevaetkepekleeelkaekelekqidkewkkieeerkappvHaeelskvekvLreFDvsskYGPciGl 94 
                      ++k+vr   k+s + k+ k+  +ek  ++e+++  +lee++++++el+k++dk++k i +er+++pvH+e++skv+ vL++FD+s+kYGP++G+
       EPX74394.1  21 FPKIVRGTGKSSATGKNAKSTVTEKGAKKESAKILSLEERIENDPELSKSLDKAYKDILSERMSKPVHEEDMSKVQLVLHHFDMSAKYGPYLGM 114
                      689******************************************************************************************* PP

  DNA_pol_delta_4  95 tRleRWkRAeklgLnPPeevkavLlkeeaeeekkke 130
                      tRleRW+RA++++L+PP+ ++++L++eea+ee++k+
       EPX74394.1 115 TRLERWRRAKRFELDPPDIIEQILTLEEADEENRKR 150
                      *********************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1094  (0.0610185); expected 358.6 (0.02)
Passed bias filter:                      636  (0.0354733); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.29s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 1073.40
//
Query:       EPX74395.1  [L=512]
Description: spindle pole body protein Sad1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.4e-38  130.3   0.1    7.8e-38  129.5   0.1    1.4  1  Sad1_UNC  Sad1 / UNC-like C-terminal
    0.00065   19.2   0.4      0.001   18.6   0.4    1.2  1  SDA1      SDA1
  ------ inclusion threshold ------
        3.1    7.7   5.9       0.32   10.8   1.2    1.8  2  UVR       UvrB/uvrC motif


Domain annotation for each model (and alignments):
>> Sad1_UNC  Sad1 / UNC-like C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.5   0.1   1.3e-41   7.8e-38       6     131 ..     355     483 ..     351     484 .. 0.97

  Alignments for each domain:
  == domain 1  score: 129.5 bits;  conditional E-value: 1.3e-41
                 B-GGGGGSS--STT-SEEEESS-EEEEEEEEEEEEEEEEEEE---GGGSG.-TTSB-EEEEEEESSTT---..-EEEEEEE--TTS-SEEEEE--TT-- CS
    Sad1_UNC   6 kapkvilqedyspgeCwsfkgsrgfvvieLseeiiveavtlehveksvap.isSapKdfevsgskrypekk..wvllgefsydedgknaqtFeleeskd 101
                 ++p+++lq+ + + +Cwsf+gs+g++ i+Ls++++v++vt+ehv+++va+ +sSapK++ev+g++   + k     lg+ +y+ + +++qtF+++ s++
  EPX74395.1 355 HEPNMALQSTNGVAMCWSFQGSEGQLGISLSRPVHVTNVTVEHVNQKVAHdLSSAPKEIEVWGQDIRHNGKkgFSYLGNLMYNIEDEPIQTFPIHVSSK 453
                 689999***********************************************************99988889************************99 PP

                 --EEEEEEEE--BSS-SSEEEESEEEEEEE CS
    Sad1_UNC 102 ilvkyvkleilsnyGneeytclyrlrVyGt 131
                  ++k v ++i+sn+Gn+eytcly++rV+Gt
  EPX74395.1 454 YPTKSVIFKIKSNWGNPEYTCLYQVRVHGT 483
                 9****************************8 PP

>> SDA1  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.4   1.7e-07     0.001     123     234 ..      86     273 ..      62     296 .. 0.61

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 1.7e-07
        SDA1 123 vesdee............eieesdesedeeeeeeeeeekeekeeeeeeeeeeeeeeeeeeeeeekekkkk............................. 180
                  +s++e              + s +se+ e+  e+ +  + +++ee ++  +e++ +  +++ +++++kk                             
  EPX74395.1  86 EASENEeferairsdpstASNASYSSEENEDGIEDTSIADTEDNEEVSD-LDEDSYKAYSKRPSANRRKKqikhffnqsswlpfesykpfawfflalfl 183
                 3333332222222222221222221111111111111122222222222.2222222222222223333356778999999****************** PP

        SDA1 181 ..........................................kakeaseeekkkekeeekiskaselattrILTpaDFaklkelraeaavkkqles 234
                                                           +     e +k+  ++e+ +++++  ++t+ LT ++F+++   ++ +++k qle+
  EPX74395.1 184 tliiigilhkapgisfgkddsiyppivqpsppsptdlgkpfeT----FEPAKE-PAKEKPKNENEPESSTHFLTKEEFHNIIHTKI-NELKTQLEK 273
                 ***********************************99744322....322333.33344444456678**********98888873.233333333 PP

>> UVR  UvrB/uvrC motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   1.2   5.4e-05      0.32      11      24 ..      84      97 ..      81      98 .. 0.85
   2 ?   -3.0   0.2       1.2   6.9e+03       3      12 ..     263     272 ..     262     273 .. 0.63

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 5.4e-05
         UVR 11 meeAaenedFEkAA 24
                 +eA+ene+FE+A 
  EPX74395.1 84 INEASENEEFERAI 97
                59***********6 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.2
         UVR   3 likeLeeeme 12 
                 +i+eL+ ++e
  EPX74395.1 263 KINELKTQLE 272
                 5677777666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (512 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1116  (0.0622455); expected 358.6 (0.02)
Passed bias filter:                      638  (0.0355848); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.42
# Mc/sec: 3630.67
//
Query:       EPX74396.1  [L=556]
Description: chaperonin-containing T-complex alpha subunit Cct1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   3.8e-150  500.8  12.2   4.3e-150  500.6  12.2    1.0  1  Cpn60_TCP1  TCP-1/cpn60 chaperonin family


Domain annotation for each model (and alignments):
>> Cpn60_TCP1  TCP-1/cpn60 chaperonin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  500.6  12.2  2.4e-154  4.3e-150       1     488 [.      33     541 ..      33     544 .. 0.97

  Alignments for each domain:
  == domain 1  score: 500.6 bits;  conditional E-value: 2.4e-154
                 HHHHHHCCSSTTXXEEEEEETTSEEEEEXSHHHHHHCSXXXSHHHHHHHHHHHHCCCCCTTCHHHHHHHHHHHHHHHHHHHHCTXXHHHHHHHHHHHHH CS
  Cpn60_TCP1   1 ladivkttlGPkGmdKmlvnkggkvvvTnDGatilkeleiehPaakllveaaesqdeevGDGTttvviLageLleeaekliaagvhpttiiegyekale 99 
                 +a+ivk++lGP G+dKmlv+++g+v+vTnDGatil+ l++ehPa k+lve+a++qd+evGDGTt+vvi+a+eLl++a +l+++++hpttii gy+ a  
  EPX74396.1  33 IANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEHPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIR 131
                 79************************************************************************************************* PP

                 HHHHHHHHHXEEBXSCSTT.HHHHHHHHHHCTTSSXXSTHHHHHHHHHHHHHCHCCCS....EECSCCCEECCCCEECECTTSEEESEEEESS--SSTT CS
  Cpn60_TCP1 100 kaleaLkeiaveisseekdreeLlkvartslsskltskeaeelsklvvdAvklieene....keldlgrikvvkieggsledselveGlvldkgvlspd 194
                 +a+++++ +  + s+++  +e+L++va+ts+ssk++ ++++++s+++vdA++++++ +    +++ ++ ++++k +g+s+++s lv+G++l+++v+s+ 
  EPX74396.1 132 EAVKFMNDV-LSSSVDTLGKESLINVAKTSMSSKVIGNDSDFFSAMAVDAMLSVKSINpkgeTRYPVKAVNILKAHGRSSRESVLVKGYALNCTVASQA 229
                 ******888.89999999*********************************8787776799999*********************************** PP

                 SSCEEECEEEEEESS-BS--HHCCHHHCCCCSCCHHHHHHHHHHHHHHHHHHHHHHTTECEEEESS-B-HHHHHHHHHCT-EEE-S--HHHHHHHHHHH CS
  Cpn60_TCP1 195 mpkklenakvllldvsLeiektetkttvvlsdaeeleklekaeekqleellekiiksgvnvvvcqkgiddlalhflakngilalrrvkkkdlerlakat 293
                 m++++ nak+++ld+ L+ ++    + ++++d+++lek++++e  +++e+++ki +sg+nv++++kgiddl+l+++ ++g +a+rr+k++dl+r+aka 
  EPX74396.1 230 MKTRIPNAKIAILDMDLQRTRMALGVHITIDDPDQLEKIREREVMIILERIKKILNSGANVILTTKGIDDLCLKTFIEAGAMAVRRCKREDLRRIAKAS 328
                 *************************************************************************************************** PP

                 T--EBSCGGGGGCGC......-EEEEEEEECCETTCCEEEEECESSSSXEEEEEEESTCCCHHHHHHHHHHHHHHHHHHHHHHEEEETTTCHHHHHHHH CS
  Cpn60_TCP1 294 Gatavssledltpee......lGtakkveeekigsekttiieevksgkiatillrgatdtvldeieraiedAlnvvknaiedekvvpGGGatelelakk 386
                 Gat++ssl++l+ +e      lG+a++v +ek++++++++++++k  ++a+++lrg+++ +lde+er+++d+l+vvk+++e++ vvpGGGa+e +l+ +
  EPX74396.1 329 GATMLSSLSNLEGDEvfessnLGYAEEVVQEKFSDDECILVKGTKAYSSASLVLRGPNEFTLDEMERSLHDSLSVVKRTLESGAVVPGGGAVESALSIY 427
                 ********8888877788888****************************************************************************** PP

                 HHCCCCTSXCCHHHHHHHHHHHHTHHHHHHHHHCTSXHHHHHHHHHHHH............HTTXTTEEEETTTTCEEECCCCTXEEEHHHHHHHHHHH CS
  Cpn60_TCP1 387 lkeyaksvsgeeqlaieafakALevipktLaeNaGldpievlaklraah............nkgekelgidvesgeiidlveagvvDplkvkrqalksA 473
                 l+++a+s+ ++eqlai  fa+AL++ip+tLa Na  d++e+ aklra h            ++g k++g+d+ +g i+d ++agv++p   k ++lksA
  EPX74396.1 428 LENFATSLGSREQLAIAEFAQALLIIPRTLAVNAAKDSTELTAKLRAYHaasqnaevtdtkKRGYKNYGLDLLNGVIRDNIKAGVLEPSMSKLKSLKSA 526
                 *************************************************7776666666555555********************************** PP

                 HHHHHHHHCEEEEEX CS
  Cpn60_TCP1 474 teaastiLrideiik 488
                 +ea   iLrid  ik
  EPX74396.1 527 VEACIAILRIDTSIK 541
                 ***********9887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (556 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       454  (0.0253221); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.48
# Mc/sec: 3510.43
//
Query:       EPX74397.1  [L=991]
Description: AGC/PKC protein kinase Pck2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.4e-61  206.9   0.0    6.4e-61  206.0   0.0    1.5  1  Pkinase         Protein kinase domain
    2.6e-37  128.5   0.0    5.5e-37  127.5   0.0    1.5  1  Pkinase_Tyr     Protein tyrosine kinase
    2.1e-23   82.2  19.1    5.7e-13   48.8   5.8    3.5  3  HR1             Hr1 repeat
    1.5e-20   72.8  30.3    4.4e-11   42.5  11.2    2.5  2  C1_1            Phorbol esters/diacylglycerol binding domain 
    2.1e-12   47.5   0.9    7.5e-12   45.8   0.9    2.1  1  Pkinase_C       Protein kinase C terminal domain
      6e-06   25.8   0.1    1.6e-05   24.4   0.0    1.8  2  Kinase-like     Kinase-like
  ------ inclusion threshold ------
        0.1   12.3   0.0       0.21   11.3   0.0    1.5  1  Crp             Bacterial regulatory proteins, crp family
       0.44   10.5   2.2        1.4    8.9   2.2    1.9  1  SipA_VBS        SipA vinculin binding site


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  206.0   0.0   2.8e-64   6.4e-61       2     264 .]     661     919 ..     660     919 .. 0.92

  Alignments for each domain:
  == domain 1  score: 206.0 bits;  conditional E-value: 2.8e-64
                 EEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHS...CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS-- CS
     Pkinase   2 ekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklk...hpnivrlyevfeekdelylvleyveggeladllerkgsls 96 
                 + l+ lG+G+fGkV+ a  k++++ +A+K++kk+ + +++e +++ +E +++   +   hp++v+l ++f++++++y+v+++v+gg+l+ +++ ++++s
  EPX74397.1 661 NFLTVLGKGNFGKVMLAEYKSNKELYAIKVLKKKFILENDEvESTKSEKRVFLVANrerHPFLVNLHSCFQTETRIYFVMDFVSGGDLMLHIQ-QQQFS 758
                 56789*********************************999999999999887776678*********************************7.689** PP

                 HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEE.SSSSCSBCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS CS
     Pkinase  97 eeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlake.lessskltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgk 194
                  ++a+++a++++ +l+y H++gi++rDlK +NiL++ +g++K++D+Gl+ke +  ++++ +f+gt+e++APE+l e++y+++vD+W+ Gv++y++l g+
  EPX74397.1 759 RRRAQFYAAEVCLALKYFHDNGIVYRDLKLDNILLSPDGHIKVADYGLCKEdMWFNNTTATFCGTPEFMAPEILLEQNYTRSVDWWAFGVLIYQMLLGQ 857
                 *************************************************9733444459**************************************** PP

                 -STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTT.....HHHHHTSGGG CS
     Pkinase 195 ppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRlt.....aeellqhpyl 264
                  pf+g++++e + ++l +             +   + +++++  ++l+kll++dp+kRl+     ae++++hp++
  EPX74397.1 858 SPFRGDDEEEIFDAILSD-------------EPLYPIHMPRDSVSILQKLLTRDPTKRLGsgendAEDVMAHPFF 919
                 ****88888855555555.............445566789********************9************98 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.5   0.0   2.4e-40   5.5e-37       3     249 ..     662     902 ..     660     905 .. 0.84

  Alignments for each domain:
  == domain 1  score: 127.5 bits;  conditional E-value: 2.4e-40
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEEST....TSSHHHHHHHHHHHHHHHTS.-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlke....eateeekeelleeakimkkl.khpnivkllgvctkeepllivteyvkgGdLlkfLrkk 95 
                  + + lG+G+fGkV+ +++k+    +++  a+K+lk+    e++e e+++  + + +  +  +hp +v+l+ +   e ++++v+++v+gGdL  +++++
   EPX74397.1 662 FLTVLGKGNFGKVMLAEYKS----NKELYAIKVLKKkfilENDEVESTKSEKRVFLVANReRHPFLVNLHSCFQTETRIYFVMDFVSGGDLMLHIQQQ 755
                  6789***************4....45555666665511114444444444444445556679*****************************9888887 PP

                  CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHH CS
  Pkinase_Tyr  96 ekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfGv 193
                     +++ ++   +a++v+ +++y +++ +v rdl   N+Lls + ++k++D+GL+++ +  +++  + +     ++mapE+l e+++t + D W+fGv
   EPX74397.1 756 ---QFSRRRAQFYAAEVCLALKYFHDNGIVYRDLKLDNILLSPDGHIKVADYGLCKEDMWFNNT--TATFCGTPEFMAPEILLEQNYTRSVDWWAFGV 848
                  ...999999999********************************************88444444..334445679*********************** PP

                  HHHHHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS CS
  Pkinase_Tyr 194 llwEiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeR 249
                  l++ ++  g+sp++g ++ee+++++ +++ l  p ++p++  ++++k +++dp++R
   EPX74397.1 849 LIYQMLL-GQSPFRGDDEEEIFDAILSDEPLY-PIHMPRDSVSILQKLLTRDPTKR 902
                  ****997.*****************9988875.778999999**********9999 PP

>> HR1  Hr1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.9   1.8   3.2e-13   7.1e-10       2      66 ..       8      67 ..       7      69 .. 0.95
   2 ?    1.5   0.1      0.14   3.2e+02      31      55 ..      84     108 ..      75     110 .. 0.85
   3 !   48.8   5.8   2.5e-16   5.7e-13       2      67 ..     122     185 ..     121     187 .. 0.95

  Alignments for each domain:
  == domain 1  score: 38.9 bits;  conditional E-value: 3.2e-13
         HR1  2 leelekklekElkireGAenllraleskktqnkkvrqeaeselsesnskielLreqLeelqasvq 66
                ++e+++k+e+E+ +++GA ++ r      tqn  v+q+ +s+++e+++ i +L+e+L +lq +++
  EPX74397.1  8 ITEVNRKIERERSVIHGALSMKR-----LTQNPVVHQQLHSNIEEAKKSIIYLEERLGKLQLRKS 67
                789********************.....69*******************************9876 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.14
         HR1  31 tqnkkvrqeaeselsesnskielLr 55 
                   n k+   + s ls  +s+++lL+
  EPX74397.1  84 YSNPKSSKSVSSSLSNVDSNLDLLN 108
                 568999999**************96 PP

  == domain 3  score: 48.8 bits;  conditional E-value: 2.5e-16
         HR1   2 leelekklekElkireGAenllraleskktqnkkvrqeaeselsesnskielLreqLeelqasvqn 67 
                 l++le+kl +E ++r G+e++ +++e   + ++++++eae + +es +ki+lLr++L+++++ + +
  EPX74397.1 122 LQQLEFKLSVEEQYRRGIEKMAKLYE--REHDRRSIAEAEKKYEESAQKISLLRHSLKRYHDLHIE 185
                 79************************..8*******************************998765 PP

>> C1_1  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.5  11.2     2e-14   4.4e-11       1      52 [.     401     450 ..     401     451 .. 0.97
   2 !   35.9  11.2   2.2e-12     5e-09       1      52 [.     469     520 ..     469     521 .. 0.97

  Alignments for each domain:
  == domain 1  score: 42.5 bits;  conditional E-value: 2e-14
                 --EEEE--SS--B-TTT-SB--SSSS-EEEETTT--EE-CCCCTTS-SBTTC CS
        C1_1   1 HhwvhrnfkqptfCkhCgeflwgkekqglkCswCkllvHkkChekvpkecgc 52 
                 H++ +++f+q ++C+ Cgefl  k+ +g++C++C +++H kC++kv ++c  
  EPX74397.1 401 HRFLQHQFYQIMRCALCGEFL--KSAVGMQCKDCLYTCHRKCYSKVVTKCIS 450
                 9********************..***************************75 PP

  == domain 2  score: 35.9 bits;  conditional E-value: 2.2e-12
                 --EEEE--SS--B-TTT-SB--SSSS-EEEETTT--EE-CCCCTTS-SBTTC CS
        C1_1   1 HhwvhrnfkqptfCkhCgeflwgkekqglkCswCkllvHkkChekvpkecgc 52 
                 Hh++ ++    ++C+hCg +l +++k + kC++C++++H +C+++vp  cg+
  EPX74397.1 469 HHFESHTNIGANWCCHCGYILPFGRKNARKCTECGITAHAQCVHLVPDFCGM 520
                 *********************99***************************97 PP

>> Pkinase_C  Protein kinase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.8   0.9   3.4e-15   7.5e-12       2      46 .]     941     980 ..     940     980 .. 0.97

  Alignments for each domain:
  == domain 1  score: 45.8 bits;  conditional E-value: 3.4e-15
   Pkinase_C   2 esdeDtsNFDpeFTeedprdtppddmpagspltssvqenFrGFtY 46 
                 +s +Dt +FD+eFT+e p +tp++     s lt  +qe+FrGF+Y
  EPX74397.1 941 DSQTDTKYFDEEFTRELPVLTPVQ-----SVLTDKMQEEFRGFSY 980
                 89*********************9.....89*************9 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0         1   2.3e+03      84     106 ..     289     311 ..     234     319 .. 0.79
   2 !   24.4   0.0     7e-09   1.6e-05     138     258 ..     760     868 ..     683     902 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 1
  Kinase-like  84 llpfdlvkiqkkkpfiqlkskes 106
                  +  +dlv+ q++k++ q  s++ 
   EPX74397.1 289 VRLSDLVEKQRRKKVEQEVSDKG 311
                  66689999999999999999875 PP

  == domain 2  score: 24.4 bits;  conditional E-value: 7e-09
  Kinase-like 138 hkkletiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvlsevekgfaPpEllgsrggytrknktkmthkldaWq 235
                  ++   ++a+  l l       + +++g+v  +++ dn+ll ++g +++ + + L +       ++++     pE+++         + ++t ++d W+
   EPX74397.1 760 RRAQFYAAEVCLAL------KYFHDNGIVYRDLKLDNILLSPDGHIKVADYG-LCKEDMWFN-NTTATFCGTPEFMAPEIL----LEQNYTRSVDWWA 845
                  44455555555555......899***************************97.777766666.555555578******888....5669********* PP

  Kinase-like 236 lGlviyriwclklPltlateeak 258
                   G+ iy +   + P+  + ee +
   EPX74397.1 846 FGVLIYQMLLGQSPFRGDDEEEI 868
                  **************998887765 PP

>> Crp  Bacterial regulatory proteins, crp family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   9.3e-05      0.21      10      27 ..     516     533 ..     515     536 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 9.3e-05
                 HHHTS-HHHHHHHHHHHH CS
         Crp  10 dylGlTrETVSRlLtrLr 27 
                 d++G + E+++R+L+  r
  EPX74397.1 516 DFCGMSMEMANRVLSEIR 533
                 8*************8765 PP

>> SipA_VBS  SipA vinculin binding site
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   2.2   0.00063       1.4       5      19 ..      88     102 ..      87     105 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00063
    SipA_VBS   5 eAAKdVtsSLSnvls 19 
                 + +K V+sSLSnv s
  EPX74397.1  88 KSSKSVSSSLSNVDS 102
                 779*********965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (991 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1194  (0.066596); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.79u 0.31s 00:00:01.10 Elapsed: 00:00:00.47
# Mc/sec: 6275.90
//
Query:       EPX74398.1  [L=213]
Description: DNA polymerase zeta Rev7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-10   39.9   1.1    1.1e-06   28.4   0.4    2.0  2  HORMA     HORMA domain


Domain annotation for each model (and alignments):
>> HORMA  HORMA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.4   0.4   6.2e-11   1.1e-06       3      93 ..      15      99 ..      13     106 .. 0.83
   2 !   10.5   0.0   1.9e-05      0.33     139     207 ..     128     201 ..     113     205 .. 0.77

  Alignments for each domain:
  == domain 1  score: 28.4 bits;  conditional E-value: 6.2e-11
       HORMA  3 elvkellaasissilylRglfpedaFedrklsglklkiLlrgsseeadr.lldwLekGvfdaLekkyLealiltIykdkdepenvlEsYtFs 93
                ++ +e+l ++i++il  R+l+pe+ F + ++  ++  +  +++++  ++ ++d +e  + + L+++ +e + l+I+++++     lE+Y Fs
  EPX74398.1 15 QVFREFLIVCIHCILCNRHLYPESLFIKSRK--YNTVVW-QSRHPILCNyIKDAVEA-CTQELQEGAVECIYLSIVSKDQV---ELERYIFS 99
                56789************************98..555555.33445555559999988.*****************966555...39*****8 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 1.9e-05
       HORMA 139 elealirrlitltqsLpplpekryltmkLlytdd..tPedyePpgFkaaaeee...dstrkeneepekvsvGkv 207
                 +l+a + r+   t sL +lpe++  +++L+  ++   P+ +e  + ++++ e+   +  r+ +    ++s+G +
  EPX74398.1 128 SLRAAMIRIQNTTRSLRNLPEDCSWSIRLTLKENdtRPRAWENWYLSENTPESnleRRYRNLTIPLRNISIGPM 201
                 6677777888999******************999999****999999888888554333333333345555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       416  (0.0232026); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.21s 00:00:00.61 Elapsed: 00:00:00.37
# Mc/sec: 1745.87
//
Query:       EPX74399.1  [L=664]
Description: U5 snRNP-associated protein Prp28 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.1e-52  175.4   0.0    1.8e-50  171.2   0.0    2.2  2  DEAD        DEAD/DEAH box helicase
    2.7e-29  101.7   0.0    5.9e-29  100.6   0.0    1.6  1  Helicase_C  Helicase conserved C-terminal domain
    2.5e-05   24.3   0.0    5.8e-05   23.2   0.0    1.6  1  ResIII      Type III restriction enzyme, res subunit
     0.0027   17.5   0.0      0.005   16.6   0.0    1.4  1  PRAI        N-(5'phosphoribosyl)anthranilate (PRA) isomerase
     0.0032   17.9   0.6       0.01   16.3   0.6    1.9  1  DUF2986     Protein of unknown function (DUF2986)


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  171.2   0.0   4.9e-54   1.8e-50       2     174 ..     276     466 ..     275     468 .. 0.96
   2 ?    1.8   0.0     0.049   1.8e+02      60     105 ..     531     576 ..     502     592 .. 0.65

  Alignments for each domain:
  == domain 1  score: 171.2 bits;  conditional E-value: 4.9e-54
                 HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHS......TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   2 diQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyet......kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskl 94 
                 +iQ+++ip + +g+d+++ aeTGsGKT+af+ip++q++++       +   gp a++++PtreLa+q+  + +kf ++++ r+++++gg+a ++q  +l
  EPX74399.1 276 SIQRASIPVLSQGKDLIGIAETGSGKTAAFMIPLIQAILKYpplderNLHLGPYAIVLAPTRELAQQIQAEGNKFAEPLGFRCVSVVGGHAFEEQSFQL 374
                 69*************************************99***9988999************************************************ PP

                 HTTCSEEEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTT............SEEEEEESSBSHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............xxxxxxxxxxxxxxx RF
        DEAD  95 dngvdivvgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklq............rqvivlSATlpkdvk 174
                 ++g++ivv+tpgrl+d l+++ + lsq++++V+DEadr+ld+gf++++n+il++lp+ +++ k+             r+++++SATlp  v 
  EPX74399.1 375 SQGAHIVVATPGRLVDCLDRRVFVLSQCSYVVMDEADRMLDMGFEEDVNKILESLPSSNSSDKNAiipasegqpssmRRTLMFSATLPPRVA 466
                 *******************************************************98887777559**********999*********7665 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.049
                 HHHHHHHHHHHTTTSTSEEEEEET...TSSHHHHHHHHHTT.CSEEEEEH CS
                 xxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxx.xxxxxxxx RF
        DEAD  60 aeqtlnnlkkfkkyidlrvlliig...gvaardqlskldng.vdivvgtp 105
                 +e + ++l++++     r++ + g   ++++++ +++l+ g +di+v+t 
  EPX74399.1 531 IEAISKQLNTLGW----RAVTLHGsknQEQREKAIEQLRGGtADILVATD 576
                 4444444444444....4443333222666677777776558*****995 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.6   0.0   1.7e-32   5.9e-29       3     111 .]     505     613 ..     503     613 .. 0.91

  Alignments for each domain:
  == domain 1  score: 100.6 bits;  conditional E-value: 1.7e-32
                 HHHHHHHHHHTTTTSEEEEEESSHHHHHH.HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHHH CS
  Helicase_C   3 leallellkleeeggkilifvntidrlek.vklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvtsy 100
                 +++l ell++ +    i++fvn ++++e   k l ++ g ++++lhg+ +q++re+++eq + g+ d+L+atd+a+rGidip+v+lV n+++ +++++y
  EPX74399.1 505 MKRLEELLESGRFAPPIIVFVNLKRNIEAiSKQL-NTLGWRAVTLHGSKNQEQREKAIEQLRGGTADILVATDIAGRGIDIPNVSLVLNYNMAKSIEDY 602
                 6778889999999999***********8533333.444************************************************************* PP

                 HHHHTTSSSTT CS
  Helicase_C 101 iqriGRtgRag 111
                  +riGRtgRag
  EPX74399.1 603 THRIGRTGRAG 613
                 *********97 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.0   1.6e-08   5.8e-05      25     158 ..     289     430 ..     258     462 .. 0.78

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 1.6e-08
                 SEEEEEESTTSTHHHHH.HHHHHHH-S.............-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--........-SEEEEEHHH CS
      ResIII  25 krglikmaTGtGKTlva.aklierllkkgkee........kflflvprkslleqtleefkkflseaykeigkkvsgdkkka.kekdstnkkilvttiqs 113
                 k ++  ++TG+GKT    + li+++lk  + +         +++l+p+++l +q + e +kf+++   +   +v g   ++ + + s+ ++i+v+t  +
  EPX74399.1 289 KDLIGIAETGSGKTAAFmIPLIQAILKYPPLDernlhlgpYAIVLAPTRELAQQIQAEGNKFAEPLGFRCVSVVGGHAFEEqSFQLSQGAHIVVATPGR 387
                 55566789******977699999999987776899*********************99999999876553333333333334455799*********** PP

                 HHHTH........HHHTTT-SEEEEETGGGTTS....TTTHHHHHT-- CS
      ResIII 114 ldadseeeeeeseellrdrfdviiiDEaHrlgak...kswreilekfk 158
                 l   +     ++  +  ++  ++++DEa r+ ++   + +++ile+++
  EPX74399.1 388 LVDCL-----DRRVFVLSQCSYVVMDEADRMLDMgfeEDVNKILESLP 430
                 *****.....99999***************999866657777766654 PP

>> PRAI  N-(5'phosphoribosyl)anthranilate (PRA) isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.4e-06     0.005      18      92 ..     486     563 ..     477     586 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.4e-06
                 HTSSEEEEE--TTBTTB--HHHHHHHCCCS--E...EEEEESSS-HHHHHHHHHHCTECEEEE-CGG.-HHHHHHHHH CS
        PRAI  18 agadelglifaesskrevseeqaqellekvpak...lVGVfvNqpieevlriaqelgldvvQLHGdedeqeyeellkt 92 
                 +++d++++i   +s  +   + ++elle+++     +V V    +ie +++++++lg  +v LHG+ ++++ e+++++
  EPX74399.1 486 QAVDRVEQIVEMVSDDSKRMKRLEELLESGRFAppiIVFVNLKRNIEAISKQLNTLGWRAVTLHGSKNQEQREKAIEQ 563
                 455666777777777777777777777777755533666666689**********************88888887774 PP

>> DUF2986  Protein of unknown function (DUF2986)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.6   2.9e-06      0.01      16      42 ..      15      41 ..       9      42 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 2.9e-06
     DUF2986 16 KkanaKlhpsnKpkYISKAeRakleae 42
                K++++  ++  Kpk+ SKAeR +l++e
  EPX74399.1 15 KNKRTREERESKPKFLSKAERTRLALE 41
                66777778889*************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (664 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1089  (0.0607396); expected 358.6 (0.02)
Passed bias filter:                      691  (0.0385409); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.62u 0.29s 00:00:00.90 Elapsed: 00:00:00.39
# Mc/sec: 5111.96
//
Query:       EPX74400.1  [L=428]
Description: carrier protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.7e-71  234.8   4.1    1.2e-23   82.8   0.1    3.1  3  Mito_carr  Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.2   0.1   7.9e-26   1.4e-21       7      94 ..     132     221 ..     128     224 .. 0.91
   2 !   76.0   0.1   8.8e-26   1.6e-21       3      92 ..     228     317 ..     226     320 .. 0.95
   3 !   82.8   0.1   6.7e-28   1.2e-23       9      93 ..     341     425 ..     334     428 .] 0.96

  Alignments for each domain:
  == domain 1  score: 76.2 bits;  conditional E-value: 7.9e-26
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS..HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
   Mito_carr   7 kellaGglagavatlvttPldvvKtrlqtqkksskksksaa..ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlll 94 
                  ++++Gg+ag+v+ ++t+Pld++K++l ++  s+ +sk+    +l++ k++y   G+rg++ G+++n+l+v+p+s++kf++ye +k+l+ 
  EPX74400.1 132 GYFFSGGIAGIVSRTCTAPLDRLKVMLISDTCSKPSSKYPFstLLHTTKSLYSRSGIRGFFVGNGINVLKVMPESSIKFGSYEAMKTLFG 221
                 5799*************************88777665544477********************************************985 PP

  == domain 2  score: 76.0 bits;  conditional E-value: 8.8e-26
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   3 lsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrl 92 
                  ++l + laGg+ag+va+++++P+d++K r+q +  +++k++++ ++d +k++yk++G+rg yrG+l+ +l+++p+sa  ++++e lk++
  EPX74400.1 228 HNPLYSYLAGGFAGTVAQFFIYPVDTLKFRIQCSDYNTQKAGRSVVFDNIKQLYKSHGVRGYYRGILIGVLGMFPYSATDLGTFEGLKKT 317
                 6788899*********************************99999******************************************987 PP

  == domain 3  score: 82.8 bits;  conditional E-value: 6.7e-28
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   9 llaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                 ++ G+l+g++++++++Pl v++trlqtq++ ++ + +++++d++ k+ k+eG+r+ly+Gl pnll+vap+ a+  ++ye  k ll
  EPX74400.1 341 MVFGALSGSIGATLVFPLNVIRTRLQTQGTPGHRASYTGFADCFLKTTKKEGFRALYKGLAPNLLKVAPSVAISYLVYENSKSLL 425
                 689*******************************99999*******************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (428 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       518  (0.0288917); expected 358.6 (0.02)
Passed bias filter:                      492  (0.0274416); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 2968.67
//
Query:       EPX74401.1  [L=228]
Description: cyclin CycC [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.8e-13   48.3   0.8    5.7e-12   45.5   0.2    2.0  2  Cyclin_N    Cyclin, N-terminal domain
    0.00013   22.3   0.3    0.00077   19.8   0.0    2.3  2  Cyclin_C_2  Cyclin C-terminal domain
     0.0016   18.5   0.1     0.0037   17.3   0.1    1.6  1  RB_B        Retinoblastoma-associated protein B domain
     0.0022   18.0   0.0     0.0053   16.8   0.0    1.5  1  TFIIB_C_1   Transcription factor IIB C-terminal module 1
     0.0032   17.5   0.8     0.0053   16.8   0.2    1.7  2  TFIIB       Transcription factor TFIIB repeat
  ------ inclusion threshold ------
      0.018   15.1   0.3       0.93    9.6   0.0    2.4  2  Cyclin_C    Cyclin, C-terminal domain
      0.035   14.1   0.0      0.048   13.7   0.0    1.1  1  NHase_beta  Nitrile hydratase beta subunit


Domain annotation for each model (and alignments):
>> Cyclin_N  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.5   0.2   2.2e-15   5.7e-12      33     126 ..      32     133 ..       7     134 .. 0.85
   2 ?    1.3   0.0       0.1   2.6e+02      51      94 ..     155     198 ..     142     212 .. 0.76

  Alignments for each domain:
  == domain 1  score: 45.5 bits;  conditional E-value: 2.2e-15
                 HHHHH..HHHHHHHTT--TTHHHHHHHHHHHHHHHS---CC.CHHHHHHHHHHHHHHHHSSS---HHHHHHHT....TT..SS-HHHHHHHHHHHHHHT CS
    Cyclin_N  33 ilidw..lvevaekfkltpetlflavnyldRflskksvpkd.klqlvgatcLllAaKveeisppkledlvyit....de..afteeeilemErliLetL 122
                 + ++w  + e+  k kl+++++++a ++l R+lsk++ + + +l+  + +c++lA+Kvee  p++++ ++  +    ++   ++++++  +E +i+++L
  EPX74401.1  32 STLHWerIQEIGDKIKLHQRVMATASVLLKRYLSKRKGKVEhTLEQHVSACVYLACKVEES-PVHIRTICNEAnalwNSslPIDRSQVAALEFEIISVL 129
                 567777799*************************98776655899999**********999.9********99666522579****************9 PP

                 TT-- CS
    Cyclin_N 123 nfdl 126
                 + +l
  EPX74401.1 130 EAYL 133
                 8765 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.1
                 HHHHHHHHHHHHHHHS---CCCHHHHHHHHHHHHHHHHSSS--- CS
    Cyclin_N  51 tlflavnyldRflskksvpkdklqlvgatcLllAaKveeisppk 94 
                  + la n+++  +++  +   + + ++ ++L+l++   e  + +
  EPX74401.1 155 QIQLAWNIVNDSYATDLCLLAHPHQIAYAALMLSCCDDEGTMNR 198
                 567788888877888888889999*********99666655555 PP

>> Cyclin_C_2  Cyclin C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1      0.47   1.2e+03      54      54 ..      47      47 ..       5      91 .. 0.55
   2 !   19.8   0.0     3e-07   0.00077      30      61 ..     158     188 ..     137     207 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.47
  Cyclin_C_2 54 a 54
                 
  EPX74401.1 47 K 47
                1 PP

  == domain 2  score: 19.8 bits;  conditional E-value: 3e-07
  Cyclin_C_2  30 rareilkssalltDayflytPsqIalaallla 61 
                  a++i++ +++ tD+++l  P qIa aal+l+
  EPX74401.1 158 LAWNIVN-DSYATDLCLLAHPHQIAYAALMLS 188
                 68999**.*********************986 PP

>> RB_B  Retinoblastoma-associated protein B domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.1   1.5e-06    0.0037      11      80 ..      33     101 ..      26     116 .. 0.90

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 1.5e-06
        RB_B  11 klaavrlrdLcerLklsselrekiwtlfehvlveetellkdRhlDqillcavYvvakvtkeelsFkeiik 80 
                 +l + r++++ +++kl+++++  +  l+++ l +++   +++ l+q + ++vY  +kv+++ ++ ++i +
  EPX74401.1  33 TLHWERIQEIGDKIKLHQRVMATASVLLKRYLSKRKGK-VEHTLEQHVSACVYLACKVEESPVHIRTICN 101
                 67789***************************988776.6899****************99999988875 PP

>> TFIIB_C_1  Transcription factor IIB C-terminal module 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   2.1e-06    0.0053       8      70 ..      38      98 ..      34     111 .. 0.83

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 2.1e-06
   TFIIB_C_1  8 alevllklsrrdeavleealelakrfvGkrrergervek.qeevaaaclmlaaerlrqPvPLae 70
                +++ + ++++  + v++ a  l+kr+  kr+    +ve+ +e+ ++ac+ la++  + Pv +  
  EPX74401.1 38 RIQEIGDKIKLHQRVMATASVLLKRYLSKRKG---KVEHtLEQHVSACVYLACKVEESPVHIRT 98
                67788899*******************99986...56662566799*************97765 PP

>> TFIIB  Transcription factor TFIIB repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.2   2.1e-06    0.0053       1      61 [.      39     100 ..      39     104 .. 0.82
   2 ?   -3.4   0.0         4     1e+04      36      48 ..     177     189 ..     176     193 .. 0.76

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 2.1e-06
                 HHHHHHHTT--HHHHHHHHHHHHHHTTSTTTTSGCTTHH...HTTHHHHHHTTTTSS--HHHHH CS
       TFIIB   1 ikrfadaleLpekVadaAkelaklaleekvlkGrspagi...aAAclyiAcrkeevkrtqkeis 61 
                 i+++ d+++L + V   A  l+k+ l+++  kG+ + ++   ++Ac+y+Ac+ ee     + i+
  EPX74401.1  39 IQEIGDKIKLHQRVMATASVLLKRYLSKR--KGKVEHTLeqhVSACVYLACKVEESPVHIRTIC 100
                 78999*******************99987..788775533339*********999876666665 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 4
                 TTHHHTTHHHHHH CS
       TFIIB  36 pagiaAAclyiAc 48 
                 p  ia A+l + c
  EPX74401.1 177 PHQIAYAALMLSC 189
                 5678888888888 PP

>> Cyclin_C  Cyclin, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.1     0.025        64      41      72 ..      47      79 ..      32     111 .. 0.72
   2 ?    9.6   0.0   0.00036      0.93      36      92 ..     169     224 ..     138     228 .] 0.78

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.025
                CS-HHHHHHHHHHHCCHHH.HS--S-HHHHHHC CS
    Cyclin_C 41 syppSliAaaalllarstl.nspewtetlehyt 72
                +    ++A+a++ll r+   ++++  +tle++ 
  EPX74401.1 47 KLHQRVMATASVLLKRYLSkRKGKVEHTLEQHV 79
                566789999999999999654444444444443 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00036
                 SCCHCCS-HHHHHHHHHHHCCHHHHS--S-HHHHHHC--.-HHHHHHHHHHHHHHHHH CS
    Cyclin_C  36 dydflsyppSliAaaalllarstlnspewtetlehytgy.skedlkpcvelilellss 92 
                    +l   p +iA aal+l+++   ++   ++l+ + +  +  ++  c++++l+++++
  EPX74401.1 169 TDLCLLAHPHQIAYAALMLSCCD--DEGTMNRLVDLFKTsDPLKIVLCIQALLSFYNQ 224
                 45578889***************..555677888888665999999999999999944 PP

>> NHase_beta  Nitrile hydratase beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   1.9e-05     0.048     134     202 ..      41     111 ..      22     125 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.9e-05
  NHase_beta 134 avGdaVrvrn.lspaghtRlPrYvrgrtGvveavegayvfpdsta.hgrgeapeplYtVrFtaeeLwgeea 202
                 ++Gd+++ ++ +++++   l rY+ +r+G+ve+  +++v  +     + +e+p ++ t+  +a+ Lw ++ 
  EPX74401.1  41 EIGDKIKLHQrVMATASVLLKRYLSKRKGKVEHTLEQHVSACVYLaCKVEESPVHIRTICNEANALWNSSL 111
                 689999987746677778899*************888888776651566666***************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       490  (0.02733); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1781.90
//
Query:       EPX74402.1  [L=138]
Description: thioredoxin Trx2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.3e-24   84.5   0.0    5.5e-24   84.1   0.0    1.1  1  Thioredoxin    Thioredoxin
    1.1e-06   28.9   0.1    1.9e-05   24.9   0.1    2.2  2  Thioredoxin_8  Thioredoxin-like
    1.2e-06   28.9   0.1    4.8e-06   27.0   0.1    1.9  1  Thioredoxin_2  Thioredoxin-like domain
    0.00046   20.0   0.0    0.00057   19.7   0.0    1.1  1  Thioredoxin_9  Thioredoxin
     0.0066   16.2   0.0     0.0089   15.8   0.0    1.3  1  Redoxin        Redoxin
  ------ inclusion threshold ------
      0.018   15.2   0.1      0.029   14.5   0.1    1.4  1  Thioredoxin_7  Thioredoxin-like
      0.035   13.5   0.0      0.042   13.2   0.0    1.1  1  OST3_OST6      OST3 / OST6 family, transporter family
      0.068   13.0   0.0      0.082   12.7   0.0    1.1  1  DIM1           Mitosis protein DIM1


Domain annotation for each model (and alignments):
>> Thioredoxin  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.1   0.0   2.5e-27   5.5e-24       6      92 ..      40     124 ..      34     134 .. 0.92

  Alignments for each domain:
  == domain 1  score: 84.1 bits;  conditional E-value: 2.5e-27
                  SHHHHHHHHTTTSSEEEEEEE-TTSHHHHCHHHHHHHHHHHCTTTSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTEEEEEEESS- CS
  Thioredoxin   6 tkenFeeevakekklvlveFyApwCghCkalaPeleklaeelkdkvklakvdvdenedlakkyevegiPtlklfkngkevkkyegar 92 
                  + e++ + v++ +k  +v+FyA+wCg+Ck l+P lekl++ ++ k  ++ vd+d+ ++la+k ev ++Pt++lfk+g+e ++++ga 
   EPX74402.1  40 SLEDYAQRVNA-DKVTVVDFYADWCGPCKFLSPLLEKLSNSHS-KSSFIAVDADKYTELAQKNEVYALPTVVLFKKGQELDRIVGAD 124
                  557899***99.*******************************.99**************************************985 PP

>> Thioredoxin_8  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.1   8.3e-09   1.9e-05       2      48 ..      52      95 ..      51     108 .. 0.85
   2 !    7.1   0.0    0.0029       6.5      64      92 ..      86     114 ..      84     117 .. 0.86

  Alignments for each domain:
  == domain 1  score: 24.9 bits;  conditional E-value: 8.3e-09
                   SEEEEEE--SSSHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-SS-HH CS
  Thioredoxin_8  2 kvvlLyfgaswcppckaftpklkelyeklkkkkkveivyvsldkkee 48
                   kv+++ f+a+wc pck   p l +l+++++   k  +++v  dk  e
     EPX74402.1 52 KVTVVDFYADWCGPCKFLSPLLEKLSNSHS---KSSFIAVDADKYTE 95
                   99***************************8...9********98433 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0029
                    .EE-TT-HHHHTT-S--TT-SEEEEE-TT CS
  Thioredoxin_8  64 vpfddkkrnklkkkynvkaiPtlvvldkn 92 
                    +++d +k  +l++k +v a+Pt+v+ +k 
     EPX74402.1  86 IAVDADKYTELAQKNEVYALPTVVLFKKG 114
                    677888999***************99875 PP

>> Thioredoxin_2  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.0   0.1   2.2e-09   4.8e-06       6      99 ..      52     123 ..      46     128 .. 0.86

  Alignments for each domain:
  == domain 1  score: 27.0 bits;  conditional E-value: 2.2e-09
  Thioredoxin_2   6 kpvlvvftdpdCpyCkklkkelkelddvtvrvllfplkpsfepkavaiwcakekkkafkdieenvelarkygvrgtPtivfldgkeivarlpGy 99 
                    k ++v+f++++C+ Ck l   l++l            +++++  ++a++ +k             ela+k +v ++Pt+v++ + ++++r++G+
     EPX74402.1  52 KVTVVDFYADWCGPCKFLSPLLEKL-----------SNSHSKSSFIAVDADKYT-----------ELAQKNEVYALPTVVLFKKGQELDRIVGA 123
                    889**********************...........677777777777777766...........599**********9977777799***996 PP

>> Thioredoxin_9  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   2.5e-07   0.00057      18     107 ..      27     114 ..      13     122 .. 0.76

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 2.5e-07
                    HHHHHHHHHHHH---HHHHHT--.S-EEEEEE--TT-HHHHHHHHHHHHHHHH-TTEEEEEE-HHHHHHHTTTTTT-SS--SSEEEEE-TT CS
  Thioredoxin_9  18 rmlrvykkvelseeteekiksie.kklkilvltedwCgDaavnvPvlakiaelnpnievkillrdenlelmdqyltngaraiPtliildee 107
                    +  +v+k+v+  +  e+ +++++ +k++++ + +dwCg +    P l+k+++   + ++  +  d+++el +   +n+  a Pt+++++++
     EPX74402.1  27 QTSSVMKQVQHVKSLEDYAQRVNaDKVTVVDFYADWCGPCKFLSPLLEKLSNSHSKSSFIAVDADKYTELAQ---KNEVYALPTVVLFKKG 114
                    4566778888777777766665416678888********************999776666666666666665...67999****9999654 PP

>> Redoxin  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0     4e-06    0.0089      26     102 ..      49     122 ..      27     134 .. 0.69

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 4e-06
                 HTTSEEEEEEESTTT-HHHHHTHHHHHTHHHHHHCSTTTEEEEEESSSHHHHHHHHH..TT-TSEEEE-TTSHHHHHTT CS
     Redoxin  26 fkgkkvvvnfvpgafcPtCsaehpyleklaellkekgvdvvavvadndafvkefwgk..eglkfpvlsDgsaaftkalG 102
                  ++k++vv f++  +c++C+   p lekl++  ++k  +++av  d d +   + ++  + l+ +vl   ++++ +  G
  EPX74402.1  49 NADKVTVVDFYAD-WCGPCKFLSPLLEKLSNS-HSK-SSFIAV--DADKYTELAQKNevYALPTVVLFKKGQELDRIVG 122
                 57899********.*******999*****998.443.455544..4444433333334455555555555555555555 PP

>> Thioredoxin_7  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.1   1.3e-05     0.029      18      82 ..      52     112 ..      38     113 .. 0.72

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 1.3e-05
                    --EEEEE--TT-HHHHHHHHHHHH-HHHHH.HHHT-EEEEESS--S-GGG.-TT---.SSEEEEE- CS
  Thioredoxin_7  18 kpvlvffgaswcftCqalerdflsdeevkaalaekfvllrvdvterdanileldeqg.vPvvafld 82 
                    k   v+f a+wc++C+ l   +++  +     ++ f+ + +d  ++ a+     e + +P+v++++
     EPX74402.1  52 KVTVVDFYADWCGPCKFLSPLLEKLSNS-H-SKSSFIAVDADKYTELAQK---NEVYaLPTVVLFK 112
                    44569************99888777444.4.5899999999985555522...3545588888876 PP

>> OST3_OST6  OST3 / OST6 family, transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.9e-05     0.042      46     106 ..      63     115 ..      39     127 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.9e-05
   OST3_OST6  46 CelCrefepefelvakswrkdekskskklfFakvdfdegkdvFqklglnsaPhlllfppkk 106
                 C +C+ + p +e++++s+ k+         F+ vd d+  ++ qk ++  +P ++lf+  +
  EPX74402.1  63 CGPCKFLSPLLEKLSNSHSKS--------SFIAVDADKYTELAQKNEVYALPTVVLFKKGQ 115
                 99******************9........4***************************9844 PP

>> DIM1  Mitosis protein DIM1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   3.6e-05     0.082      12      87 ..      43     117 ..      31     133 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 3.6e-05
                 HHHHHH-SSSEEEEEEE-TT-HHHHHHHHHHHHHHHHTTTTEEEEEEETTT--TTSCCCTT-SSSEEEEEETTEEE CS
        DIM1  12 dqailseeerlvviRFGrdedaeClklDelLakiaeklknfaviylvdidevpdfnkmyeledpvtilffyrnkhm 87 
                 d a + + +++ v+ F  d+   C  l  lL+k +++ ++ + i  vd d+  ++ +  e++   t+++f +++ +
  EPX74402.1  43 DYAQRVNADKVTVVDFYADWCGPCKFLSPLLEKLSNSHSKSSFI-AVDADKYTELAQKNEVYALPTVVLFKKGQEL 117
                 567777899****************************9997766.68***************88888888677655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       574  (0.0320152); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.48u 0.30s 00:00:00.78 Elapsed: 00:00:00.48
# Mc/sec: 861.89
//
Query:       EPX74403.1  [L=136]
Description: hypothetical protein SOCG_03612 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       320  (0.0178482); expected 358.6 (0.02)
Passed bias filter:                      211  (0.0117686); expected 358.6 (0.02)
Passed Vit filter:                         8  (0.000446204); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.28s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 990.80
//
Query:       EPX74404.1  [L=999]
Description: 2-oxoglutarate dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.5e-65  217.6   0.0    2.5e-64  216.2   0.0    1.7  2  Transket_pyr     Transketolase, pyrimidine binding domain
    5.4e-60  202.9   0.0    7.7e-60  202.4   0.0    1.2  1  E1_dh            Dehydrogenase E1 component
    3.3e-51  173.0   0.1    6.2e-51  172.1   0.1    1.5  1  OxoGdeHyase_C    2-oxoglutarate dehydrogenase C-terminal
    2.5e-19   68.6   2.3    2.6e-19   68.5   0.5    2.0  2  2-oxogl_dehyd_N  2-oxoglutarate dehydrogenase N-terminus
  ------ inclusion threshold ------
       0.11   13.1   0.0       0.27   11.8   0.0    1.6  1  baeRF_family12   Bacterial archaeo-eukaryotic release factor 
       0.19   11.5   0.0       0.31   10.8   0.0    1.3  1  ATP_bind_1       Conserved hypothetical ATP binding protein


Domain annotation for each model (and alignments):
>> Transket_pyr  Transketolase, pyrimidine binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       1.3     4e+03      57      74 ..     282     298 ..     281     318 .. 0.68
   2 !  216.2   0.0   8.3e-68   2.5e-64       2     178 .]     633     845 ..     632     845 .. 0.99

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.3
                   HHHHHHHHHHHHHHCTTE CS
  Transket_pyr  57 EqavlgfavGaalagpll 74 
                   E++v  + +G+a +g+ l
    EPX74404.1 282 EHGVSNVVIGMAHRGR-L 298
                   8899999999998885.3 PP

  == domain 2  score: 216.2 bits;  conditional E-value: 8.3e-68
                   EEEHHHHHHHHHHHHHCTTTTEEEEESSTHHHHTTCHCCHHEGGT................TEGEEE--S-HHHHHHHHHHHHHHCT.TEEEEEEEE CS
  Transket_pyr   2 kiawrkaeaealaellkedpevvligaDvaggtfsvrkgllhdqg................egrvidsgisEqavlgfavGaalagp.llviveaqF 81 
                   +i++ +ae++a+a+ll+e+++v+++g+Dv++gtfs+r+++lhdq+                ++ + +s++sE++vlgf++G++l++p +lv++eaqF
    EPX74404.1 633 QIDMPTAETLAFATLLEEGHHVRVSGQDVERGTFSQRHSVLHDQKsenvyiplnhlsdkqaSFVIRNSSLSEYGVLGFEYGYSLSSPnALVVWEAQF 729
                   89*********************************************************************************************** PP

                   HHHHGGGHHGGHHHHHCHHHHHT--EEEEESBSGGGSTTGTTTSBSSHHHHHHTSTT...................EEEE--SSHHHHHHHHHHHHH CS
  Transket_pyr  82 gdFangAqiyadqairsgeakgklkvgvvtrlpigvgedGpehqsaeleaflrlipg...................lkvvrPsdpaetkhllrrair 159
                   gdFan+Aq+++dq+i +ge+k+ +++g+v+ lp+g++++Gpeh+sa++e++l+l+++                   +++++ + p++++h+lrr i+
    EPX74404.1 730 GDFANNAQCIIDQFIAAGETKWLQRSGIVLSLPHGYDGQGPEHSSARIERYLQLCNEdprtfpsedklqrqhqdcnIQCIYVTKPSQYFHALRRNIH 826
                   ************************************************************************************************* PP

                   SSS.SEEEEEE-SSEEC.T CS
  Transket_pyr 160 redrkPvvlrlpksllrhk 178
                   r++rkP++++++ksllrh+
    EPX74404.1 827 RQFRKPLIVFFSKSLLRHP 845
                   *****************85 PP

>> E1_dh  Dehydrogenase E1 component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  202.4   0.0   2.6e-63   7.7e-60       7     297 ..     245     562 ..     239     565 .. 0.89

  Alignments for each domain:
  == domain 1  score: 202.4 bits;  conditional E-value: 2.6e-63
                 HHHHHHHHHHHHTTSS-S-----TT-HHHHHHHHHTS-TT..SEEEES.S--HHHHHHTT--..HHHHHHHHTT-T....TTSSGTT-..-E..BT... CS
       E1_dh   7 rrvedaldalykrkkrigfyhlsagqealkvgiaaaleke..Dliite.YReagvllargls..leeilaeltgkv....kgkggsrh.elmyaek... 92 
                   +e +l+ ++ + kr+g++ ++   + +k +i+ ++e++  +++i + +R++ ++l ++++   ++i++e++g +    +g+g++++  +m  ++   
  EPX74404.1 245 HSFERFLSTKFPNDKRFGLEGCESMVPGMKALIDRSVEHGvsNVVIGMaHRGRLNVLHNVVRkpAQAIFSEFRGTQdpedEGSGDVKYhLGMNYQRptp 343
                 678999999******************************9988888666************98899**************7888888776554443111 PP

                 ...T..BEEE-SSTTTH..HHHHHHHHHHHH......HHTS---EEEEEEGGG.TT-HHHHHHHHHHHHTT--E...EEEEEEESEETTEEHHHH-S-- CS
       E1_dh  93 ...esrilggngivgaq..vplvaGialaak......iegkkevailliGDgA.anqGdvyealnlaalwklpv...ifvveNNkygisTeaekasask 176
                     +++    ++++++   p+v G ++a +         ++++ +ll+GD+A a+qG+vye+l l +l+++ v   i++v NN++g++T+++ a++++
  EPX74404.1 344 sgkRVSLSLVANPSHLEaeDPVVLGKVRAIQhytsdeASHDQSMGVLLHGDAAfAAQGIVYETLGLHSLPGYSVggtIHIVINNQIGFTTDPRFARSTP 442
                 1112333334444444433777778888888***9999999********************************************************** PP

                 -GGG..TTTTS-EEEEETTSHHHHHHHHHHHHHHHHTTT--EEEEEEE--SS-SSTTSHSHSSSHHHHHHHHHHHH-HHHHHHHHHHHTTSS-HHHHHH CS
       E1_dh 177 eladrargvgipglrVdgnDplavyeAvkfAaeraregkgpllielvtYRyggHsesDdpstyrtreeveevrkkkdpiqrlkelLvkkgvvseeelke 275
                 + +d a+ +++p+++V+g+D++a    ++ Aae+++++k +++i++v+YR++gH+e D ps+++ + +++ + ++++  +++ e+L ++  ++ ee+++
  EPX74404.1 443 YCTDIAKTMEAPIFHVNGDDVEATTFICQLAAEWRKTFKTDVVIDIVCYRRHGHNETDQPSFTQ-PRMYQTISEHEPTFNKYTEKLLNEKSITPEEVEA 540
                 ****************************************************************.********************************** PP

                 HHHHHHHHHHHHHHHHHHS--- CS
       E1_dh 276 iekevrkeveeavkkaeskkel 297
                  +k++ ++ e  ++ ++++k+ 
  EPX74404.1 541 QKKRIWEILESSFESSKDYKQD 562
                 ******************9986 PP

>> OxoGdeHyase_C  2-oxoglutarate dehydrogenase C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  172.1   0.1   2.1e-54   6.2e-51       1     152 []     848     998 ..     848     998 .. 0.96

  Alignments for each domain:
  == domain 1  score: 172.1 bits;  conditional E-value: 2.1e-54
  OxoGdeHyase_C   1 rSsleelaegtsFqrvledeeeea.lkepekvkrvvlcsGkvyydLlkerekkekekdvaivriEqlyPfpfeelkeelekYpnakelvWvQeEpk 95 
                    rS++ee++e+  F+ +le+ee+ + +++pek++r+vlc+G+v+++L k+re+++  ++va++riEql+Pf +++++e+++kYpn+ke+vW+QeEp 
     EPX74404.1 848 RSDIEEFEENRAFKLILEEEEHGTkIQAPEKIDRLVLCTGQVWVALSKAREDNKV-DNVAFTRIEQLHPFGWKQVAENISKYPNLKEIVWCQEEPL 942
                    699***************9999657999***********************8865.**************************************** PP

  OxoGdeHyase_C  96 NqGawsfveprletvlkekkkkkkklryvgreasaspAtGskkvhkkeqealleeaf 152
                    N+Gaws++epr+ t+l++   +k  +ry+gr++sas+AtG+k++h  e e+ll+ea+
     EPX74404.1 943 NAGAWSYMEPRIYTILDHL-GRKLPVRYAGRAPSASVATGNKQQHILESEQLLNEAL 998
                    ****************976.67799*****************************997 PP

>> 2-oxogl_dehyd_N  2-oxoglutarate dehydrogenase N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.5   0.5   8.6e-23   2.6e-19       1      40 [.      35      74 ..      35      75 .. 0.96
   2 ?   -2.3   0.1       1.2   3.5e+03      28      35 ..     474     481 ..     473     482 .. 0.87

  Alignments for each domain:
  == domain 1  score: 68.5 bits;  conditional E-value: 8.6e-23
  2-oxogl_dehyd_N  1 dsfLsgtnaaYiEelYeayleDPsSVdesWrayFknledg 40
                     d+fL+g+ a Y++e+Yea+++DP+SV+ sW+ayFkn+++g
       EPX74404.1 35 DTFLTGSAADYVDEMYEAWKKDPNSVHVSWQAYFKNVKSG 74
                     68**********************************9987 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 1.2
  2-oxogl_dehyd_N  28 esWrayFk 35 
                      ++Wr+ Fk
       EPX74404.1 474 AEWRKTFK 481
                      69*****8 PP

>> baeRF_family12  Bacterial archaeo-eukaryotic release factor family 12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   9.2e-05      0.27      80     132 ..     795     847 ..     793     853 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 9.2e-05
  baeRF_family12  80 deLkkrakegkferlvlvappetlgelrkhlhkevkkrlvgeiaknltkhppa 132
                     d+L+++ ++ +++ ++++ p +  + lr+++h++ +k l   ++k l+ hp+a
      EPX74404.1 795 DKLQRQHQDCNIQCIYVTKPSQYFHALRRNIHRQFRKPLIVFFSKSLLRHPVA 847
                     8999***********************************************96 PP

>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0    0.0001      0.31     132     236 ..     808     911 ..     795     915 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.0001
  ATP_bind_1 132 sqrltdptkfisgllsalsamlrlelPhvvvlnkfDllkeklekeleffedvealslllekee.ekykklaeaiaelleefalvlrflplssekeesie 229
                 + ++t+p++++++  +  ++  + + P +v ++k  l    ++ ++e fe+  a++l+le+ee +   + +e+i +l+  ++ v + l  ++e+++  +
  EPX74404.1 808 CIYVTKPSQYFHA--LRRNIHRQFRKPLIVFFSKSLLRHPVARSDIEEFEENRAFKLILEEEEhGTKIQAPEKIDRLVLCTGQVWVALSKAREDNKVDN 904
                 568999*******..8999999*************996655****************9999988777899999*9999999999888888888877666 PP

  ATP_bind_1 230 dllslid 236
                 + ++ i+
  EPX74404.1 905 VAFTRIE 911
                 6666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (999 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       518  (0.0288917); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.81u 0.31s 00:00:01.12 Elapsed: 00:00:00.52
# Mc/sec: 5831.10
//
Query:       EPX74405.1  [L=884]
Description: sulfate transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   2.3e-113  378.8  17.4     3e-113  378.4  17.4    1.1  1  Sulfate_transp  Sulfate permease family
    5.3e-13   48.6   0.0    1.1e-12   47.6   0.0    1.4  1  STAS            STAS domain
     0.0036   17.7   1.5     0.0036   17.7   1.5    2.7  2  MFS_MOT1        Molybdate transporter of MFS superfamily


Domain annotation for each model (and alignments):
>> Sulfate_transp  Sulfate permease family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  378.4  17.4    5e-117    3e-113       2     379 ..     138     526 ..     137     527 .. 0.97

  Alignments for each domain:
  == domain 1  score: 378.4 bits;  conditional E-value: 5e-117
  Sulfate_transp   2 kgDliaGitvallaiPqalayallaglppiygLyssvvpqlvyalfGtsrqlavGpvavlslivgeiiakvaeee.pekgieiattltllaGviq 95 
                     + D+iaG+tv+++ +Pq+++ya++aglp++ygLyss+v+ ++y +f+ts+++++Gpvav+sl+++e+i++v +++   ++ +i + l+llaG++ 
      EPX74405.1 138 IFDVIAGVTVGCIVVPQGMSYAKVAGLPAEYGLYSSFVGVAIYCFFATSKDVSIGPVAVMSLVTSEVIKNVSAKDpTYSAPQIGSCLALLAGAVT 232
                     67*********************************************************************77773567899************* PP

  Sulfate_transp  96 vllGllRLgflveflseavlsGfiaGaaivillsqikvllgle.rvskkeslvsvlsslftnlekvnlakvvlgllllvvLlvtkellkklkkl. 188
                     + +GllRLgf++ef++ ++++Gf++G+a++i+  q+ +l+g++  vs+++ +++ ++ +++nl++++ +++++gl+ l++L+v++  ++ l  + 
      EPX74405.1 233 CGIGLLRLGFIIEFIPIPAVAGFTTGSALNIISGQVPSLMGYKkLVSTHGATYRIIIGTLKNLPHTK-VDAAFGLVSLFILYVIRYSCQFLTRRy 326
                     *******************************************99********************99.9*****************999887779 PP

  Sulfate_transp 189 .......lvipapaelvavivatlvsaif..elkreagvkivgeipsglpelslpkvdwsllsallpdalaialvglleaiavsksldkkkgykv 274
                            +++ + +  v++i++t +s+ +   ++++  + i+ ++p+g++++++pk++ +l  ++++++++  +v lle+i+++ks++++++ykv
      EPX74405.1 327 prgqrvfFLVNVLRSAVIIIIGTAISYGVckGRRENPPINILLSVPRGFQHVGVPKISKKLCADMASELPVSVIVLLLEHISIAKSFGRVNDYKV 421
                     9**************************9986666677888999**************************************************** PP

  Sulfate_transp 275 dsnkELvAlGfsNilsslfgglpatgafsrsavnikaGaktqlsglvsalvvllvllvltplleyiPkavLaaiiivagkglLvelkelkklwkl 369
                      +++EL+A+G++N+++ +f+++patg+fsrsa+++k+G++t+l+g+++a+vv+l+l++lt++++yiP+avL+a+ii+ + +l+  +++l+ +w++
      EPX74405.1 422 IPDQELIAMGVTNLIGVFFNAYPATGSFSRSAIKAKSGVRTPLAGIFTAAVVILALYCLTGAFYYIPNAVLSAVIIHSVFDLILPWRQLVLFWRM 516
                     *********************************************************************************************** PP

  Sulfate_transp 370 skldflilla 379
                     ++l++li+la
      EPX74405.1 517 QPLEALIFLA 526
                     *******987 PP

>> STAS  STAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.6   0.0   1.8e-16   1.1e-12       8      78 ..     604     702 ..     597     729 .. 0.94

  Alignments for each domain:
  == domain 1  score: 47.6 bits;  conditional E-value: 1.8e-16
                 TTEEEEEEEEEESHHHHHHHHHHHHHHHHCCC....................................-SEEEEEEEEEEEE-HHHHHHHHHHHHHHHH CS
        STAS   8 egililrldgpidfanaesfkeklkravgeeperve............................kkeslkslildlsavsfiDssGvraLkeilkelkr 78 
                  g+li+rl++ +++ na+++++ l+ ++++ ++r +                            k+  l+ +ild+sav++iD++Gv++L++++kel++
  EPX74405.1 604 LGVLIFRLQESFTYPNAQHVNSMLTTKAKDVTRRGKnvqvkkkqdrawndpppkkqkkgvkiedKRPLLRAIILDFSAVNHIDTTGVQSLVDTRKELEN 702
                 589****************************99999***************************99999****************************984 PP

>> MFS_MOT1  Molybdate transporter of MFS superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.3     0.089   5.3e+02      73     109 ..     226     261 ..     190     302 .. 0.75
   2 !   17.7   1.5     6e-07    0.0036      25     106 ..     410     498 ..     386     503 .. 0.76

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.089
    MFS_MOT1  73 illGlvllllgltgllerllrliPksvlgglllgaGl 109
                 +l G+v + +gl++ l  + ++iP + + g   g++l
  EPX74405.1 226 LLAGAVTCGIGLLR-LGFIIEFIPIPAVAGFTTGSAL 261
                 34455555555554.6666667777777666666555 PP

  == domain 2  score: 17.7 bits;  conditional E-value: 6e-07
    MFS_MOT1  25 a.........slsltalllsvGlmnlltglfggvPmc.hgAgglaaqyrfgartgaagillGlvllllgltgllerllrliPksvlgglllg 106
                 a         ++ +++ l+ +G+ nl++++f + P     +  ++   ++g rt  agi++++v++ l+l   l+    +iP++vl ++++ 
  EPX74405.1 410 AksfgrvndyKVIPDQELIAMGVTNLIGVFFNAYPATgSFSRSAIKA-KSGVRTPLAGIFTAAVVI-LALYC-LTGAFYYIPNAVLSAVIIH 498
                 255566666667788999******************98777777766.67**********998876.55554.6888999******999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (884 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       528  (0.0294495); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.29s 00:00:00.95 Elapsed: 00:00:00.46
# Mc/sec: 5795.57
//
Query:       EPX74406.1  [L=399]
Description: GDP/GTP exchange factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    0.00026   21.7   0.1       0.23   12.4   0.1    3.1  2  WD40         WD domain, G-beta repeat
  ------ inclusion threshold ------
      0.014   15.6   0.0       0.47   10.8   0.0    2.9  3  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.9   0.0    0.0028        25       4      36 ..     255     287 ..     252     287 .. 0.85
   2 !   12.4   0.1   2.6e-05      0.23       7      36 ..     298     328 ..     291     329 .. 0.80

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0028
                 EEEEESSSSEEEEEEETTSSEEEEEETTSEEEE CS
        WD40   4 lrtltGHssvtslafspdgawlasGsdDgtvri 36 
                 ++tl+  ++vt ++ +p++ +++ ++ D++vr+
  EPX74406.1 255 MKTLRNAKGVTKFCMDPSSGMIIVATADCKVRF 287
                 567776689************998888****95 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 2.6e-05
                 EESS.SSEEEEEEETTSSEEEEEETTSEEEE CS
        WD40   7 ltGH.ssvtslafspdgawlasGsdDgtvri 36 
                  t H  ++t+++ spd+  las s Dg + i
  EPX74406.1 298 NTVHhLPITDMRLSPDSEILASVSVDGQLCI 328
                 3456456**************99****9987 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.0         2   1.8e+04      46      60 ..      16      29 ..      13      32 .. 0.67
   2 ?    5.6   0.0    0.0021        19      31      68 ..     251     291 ..     228     305 .. 0.72
   3 ?   10.8   0.0   5.2e-05      0.47       6      80 ..     272     344 ..     268     353 .. 0.86

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 2
  ANAPC4_WD40 46 WkpdgklLavaysdg 60
                 W ++ +lLav+   g
   EPX74406.1 16 W-MNKNLLAVGGGGG 29
                 5.3567899987666 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.0021
  ANAPC4_WD40  31 tl...eedkedsevrsLaWkpdgklLavaysdgevrlldae 68 
                  t+   ++  + + v++++  p+  ++ va++d +vr++  +
   EPX74406.1 251 TFasmKTLRNAKGVTKFCMDPSSGMIIVATADCKVRFMTLN 291
                  3366666778899***********************98765 PP

  == domain 3  score: 10.8 bits;  conditional E-value: 5.2e-05
  ANAPC4_WD40   6 tmDLiAlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvks 80 
                  +  +i +at+d +++   ln   + +   + +   +++++ +pd ++La +  dg++ ++ + + k +++++ ++
   EPX74406.1 272 SSGMIIVATADCKVRFMTLNLTTLSSN--TVHHLPITDMRLSPDSEILASVSVDGQLCIHYSGKYKQLSTVQLED 344
                  556788899999999999999888877..899*************************999998888888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (399 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       581  (0.0324056); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.45
# Mc/sec: 2684.06
//
Query:       EPX74407.1  [L=322]
Description: TFIIH complex cyclin Mcs2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-17   63.4   0.2    2.2e-13   50.5   0.0    2.4  2  Cyclin_C_2  Cyclin C-terminal domain
    1.5e-08   34.4   0.0    2.6e-08   33.6   0.0    1.4  1  Cyclin_N    Cyclin, N-terminal domain


Domain annotation for each model (and alignments):
>> Cyclin_C_2  Cyclin C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   0.1   5.3e-05      0.47      13      70 ..      77     131 ..      64     155 .. 0.81
   2 !   50.5   0.0   2.5e-17   2.2e-13       2      77 ..     168     243 ..     167     310 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 5.3e-05
  Cyclin_C_2  13 LkalgkslekriekaykrareilkssalltDayflytPsqIalaallladeklaerYl 70 
                 L+al+++++  +++++++a  ++k + +lt  ++ y P  I + +l+la ++ +  Yl
  EPX74407.1  77 LNALSSTMS-LPTHIRATATLFFK-RFYLTSSVMEYNPKIISFTTLYLATKTND-HYL 131
                 555566665.8899999*******.************************98876.444 PP

  == domain 2  score: 50.5 bits;  conditional E-value: 2.5e-17
  Cyclin_C_2   2 PfRpLeGflldLkalgksle.kriekaykrareilkssalltDayflytPsqIalaallladeklaerYleeklgke 77 
                 PfRpL+Gflld++ + ++   + + +++++a+++l  ++l +D+yf+++Ps Ial+ +++++ +l  +Yl+ k  ++
  EPX74407.1 168 PFRPLQGFLLDFQVVIPETPvEILFECHDQAKRFLV-ETLHSDVYFYHSPSIIALSGIYHTNPSLCLSYLQAKSINS 243
                 9************995555437899***********.***********************************99874 PP

>> Cyclin_N  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.6   0.0   2.9e-12   2.6e-08      38     126 ..      77     163 ..      46     164 .. 0.88

  Alignments for each domain:
  == domain 1  score: 33.6 bits;  conditional E-value: 2.9e-12
                 HHHHHHHTT--TTHHHHHHHHHHHHHHHS---CCCHHHHHHHHHHHHHHHHSSS---HHHHHHHTTTSS-HHHHHHHHHHHHHHTTT-- CS
    Cyclin_N  38 lvevaekfkltpetlflavnyldRflskksvpkdklqlvgatcLllAaKveeisppkledlvyitdeafteeeilemErliLetLnfdl 126
                 l  +++ ++l + + ++a  ++ Rf+ + sv +++ + +  t L+lA+K+++ +   +e+++       t +++le E ++ ++Ln+dl
  EPX74407.1  77 LNALSSTMSLPTHIRATATLFFKRFYLTSSVMEYNPKIISFTTLYLATKTNDHY-LPIEHFCKNLP-KTTPDQVLEYEFDVCQALNWDL 163
                 6678889999999*************************************8775.55888887765.788*****************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       866  (0.0483016); expected 358.6 (0.02)
Passed bias filter:                      500  (0.0278878); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.28s 00:00:00.78 Elapsed: 00:00:00.44
# Mc/sec: 2216.13
//
Query:       EPX74408.1  [L=3632]
Description: SAGA complex phosphatidylinositol kinase-like protein Tra1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      2e-66  224.6   8.1      2e-66  224.6   8.1    2.5  2  FAT             FAT domain
    3.8e-29  102.2   0.2    1.5e-28  100.3   0.1    2.0  2  PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
    0.00016   21.4   0.5    0.00037   20.2   0.5    1.7  1  FATC            FATC domain
  ------ inclusion threshold ------
      0.033   14.3   1.6         11    6.5   0.2    2.9  2  TPR_2           Tetratricopeptide repeat
       0.09   13.1   0.1       0.27   11.5   0.1    1.7  1  E2R135          Coiled-coil receptor-binding R-domain of coli
        0.2   12.5   3.3        7.2    7.7   0.1    4.1  3  TPR_14          Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> FAT  FAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.9      0.39   1.2e+03     225     277 ..    2547    2608 ..    2517    2626 .. 0.66
   2 !  224.6   8.1   6.7e-70     2e-66       2     346 .]    2642    2994 ..    2641    2994 .. 0.98

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.39
                  -SS---.....................HHHHCCCTCCCCCCCCCCCT.S...-SSCCHHHHC CS
         FAT  225 qsgleaq.........keptnleeftkllarcylkkGewqealqkldwseekieeilqsysa 277 
                   s+l+a+         +  ++ +++++++a  y  +G+w +a q  +++++k++ +   +s+
  EPX74408.1 2547 ISELYASlseedmfygHGRRTSKYLQTQVALSYEQLGMWGRAQQLYEQAQTKARSEAFPFSE 2608
                  22233335555566666777888888888999********9999977666666655555544 PP

  == domain 2  score: 224.6 bits;  conditional E-value: 6.7e-70
                  CCTTCCCCTSSSGHHCCCCT.........TSSSS--CCCHCCCCHH..--...CCHCHHCCCHCCCCCCCCCTS---SCCCCCHHHHHCCCCCHHHC CS
         FAT    2 plaaeaaWrlgqWdsmeeylsvlk.....kdspdkaffeailalhr..nq...fdeakeliekarqlldtelsalvgesynraygvlvrvQmlaEle 88  
                  +l +e+aWr ++W s +e l+v        ++p+k +f+ ++ l++  nq   ++e+++   +a+ l   ++++l+ ++ +++ ++l+ +Q+ +El+
  EPX74408.1 2642 ELLLECAWRISDWSSNRESLEVAIkslsdIPTPRKLTFQSFMTLQKslNQpasVKEFHQTLAEAIHLGLLKWHQLPEKINQSHFPLLHLFQQFVELQ 2738
                  789*****************99999999999************9998866666******************************************** PP

                  HHCCHHCSS-.........---TTTTTTT----TTS-TTTGCCCTTTCCCCTCCCHCCCHC........................HCCS-STTCCC. CS
         FAT   89 eiiqykqkls.........sseklksllktWrkRlpgcqdnvevwqdiltvRslvlspied........................llkgvkaemwl. 151 
                  e++++++ ls         + ++ ks l+ W++Rlp+++d+++ w d+l++R++++s+ ++                         ++g+++++wl 
  EPX74408.1 2739 EASNIYSYLSsintqnlptNVQCIKSALQVWQERLPNVWDDISLWRDLLSWRQIIFSMVNRiylplipkvqstgsdspassntsfFFRGYHETAWLi 2835
                  ********99*************************************************************************************** PP

                  .CCCCCHCHHHHCCSTTHHCCCCCHCTT.....TT.TSSCCCHHHHHHHCCHHHHHSSCCHHHHCCTSSCCCSS-SS---............HH.HH CS
         FAT  152 .kfanlarksgrlslAekaLkelleedpeewlprappevvyaylKylwssgeqkealqkLreftsellekkeelqsgleaqkeptnleeftkll.ar 246 
                   +fa++ark++ +s++ ++L+++                      y+++++e++ea++kLre++ ++l++++el++gle   ++tnl++f+ ++ ++
  EPX74408.1 2836 nRFAHVARKHKLPSVCLNQLTKI----------------------YSLPNIEIQEAFYKLREQVLCYLQNPKELKNGLEIV-SNTNLMYFNSRQkSE 2909
                  ***********************......................***********************************9.*************** PP

                  CCCTCCCCCCCCCCCT.S...-SSCCHHHHCCHHCTCCCHSTTCCCCHHHHHCCHHHHHHSSSS.S-TCCHHHHCCT..CCHHHHTTTS.STTTCHH CS
         FAT  247 cylkkGewqealqkldwseekieeilqsysaateidpswykawhtwalfnfevvskeeeqkeeeepedlqeyvvpavkgflksislsse.nslqdtl 342 
                  +y +kG+++e+l+k        +e++q y+aa++id ++ +aw++w+++n+ +++k         pe+++  +++av+++l+++  +++ ++++ ++
  EPX74408.1 2910 FYSLKGKFLEKLGK-------DDEANQTYAAAVQIDLGLSEAWAEWGRYNDINFRKS--------PENIN-AACNAVSCYLQAAGTYETyHARKMLA 2990
                  **************.......89**********************************........99998.************************** PP

                  HHHC CS
         FAT  343 RLLt 346 
                  R+L+
  EPX74408.1 2991 RVLW 2994
                  ***8 PP

>> PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.86   2.6e+03     190     243 ..    1391    1441 ..    1360    1447 .. 0.76
   2 !  100.3   0.1   4.9e-32   1.5e-28       4     248 ..    3296    3562 ..    3293    3563 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.86
                      -.SSSSSS-THHHHHHT.STTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHH CS
  PI3_PI4_kinase  190 pqekvPfrltrelvlai.dpskdeglfresceealealrrdqnlltrllkkavkd 243 
                      + +k+P +l ++   +   +++d +++  sc   le l+r  +llt+++k  + +
      EPX74408.1 1391 N-QKLPKELLQSGLRPVlMNLSDHNKLSVSC---LEGLSRLLRLLTNYFKVEIGR 1441
                      4.7888876666666555999*******999...899999999999999976555 PP

  == domain 2  score: 100.3 bits;  conditional E-value: 4.9e-32
                      EEEECSSCHHHHHHHHHHHHHHHHHHHHTTTTCCCT-------EEESSSSEEEEE--TTEEEHHHHHHHHHHHC........TTSTCHHHHH. CS
  PI3_PI4_kinase    4 giykvgddlrqdelivqvfklmdeelskennpkrrklalktysviplgrkcgiielvassetaaslldeklekk........gvpptasves. 87  
                      ++y+ g+ +r++e+i+q+ + ++  l ++ +++rr l+++ +s++pl+++ +++e+ +ss +++++++ +   +        +        + 
      EPX74408.1 3296 VQYPSGRNSRREERIMQFTRYLNDALNANTETRRRCLNFYVPSAVPLSSHIRLLEDQPSSVSLQTVYEDYSDVRkfakdepaN--------Vf 3380
                      79*******************************************************************99877566555552........34 PP

                      ......................HHHHCHCHCCHHHHHCCHHHHHHTSSTTHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHT-TT-- CS
  PI3_PI4_kinase   88 ......................lrvaldkkklkkekklkfekrtalkpksgllqeFvkkspsaeewlearkqFvrslaklsvldyilgngDRh 158 
                                            +++a++k+ ++k +++ +e +++++p+  l+++F  +++++ +++ +rk+F  ++a +s+l+yil ++ R 
      EPX74408.1 3381 tdelskwmqsaasrftsessesEKLATRKELFAKRITIFEEIQKLFVPTTMLKDYFNNTFTNFSDFWLFRKSFSYQYACFSFLTYILSINSRV 3473
                      444554578888777666666666666666666666666****************************************************** PP

                      TTTEEEETTTSEEEESSTTTCCTCSHCSSSS-.SSSSSS-THHHHHHTSTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCCSS CS
  PI3_PI4_kinase  159 ldNilvdktsgklihIDfGlilpdewkllpfpqekvPfrltrelvlaidpskdeglfresceealealrrdqnlltrllkkavkdglilw 248 
                      +++i  +k+sg +   +   ++ ++ +++++  e vPfr t+++ + i+ +   gl+  s + + +al++++  l +ll ++v+d + +w
      EPX74408.1 3474 PSKIYFSKESGSVWSSEALPAMISSSPVYHNG-EVVPFRFTPNINEFIGRTCRDGLLGPSIMAIARALSKPDFDLSMLLGIFVADDVQWW 3562
                      ******************************88.***************************************************998877 PP

>> FATC  FATC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.5   1.3e-07   0.00037       1      32 []    3601    3632 .]    3601    3632 .] 0.96

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 1.3e-07
        FATC    1 pLsveqQVdrLIkeATdpeNLaqmyiGWcPww 32  
                  +L+v+q+  +   +A + + Laqm++ W+Pw+
  EPX74408.1 3601 NLPVNQTAIDYLTQASSSKVLAQMDVLWAPWI 3632
                  599****************************6 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.2    0.0036        11       8      28 ..    2576    2596 ..    2571    2600 .. 0.90
   2 ?    5.8   0.1     0.006        18       2      31 ..    2909    2938 ..    2908    2940 .. 0.93

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0036
       TPR_2    8 GlayyklgdyeeAleafekAl 28  
                  +l+y++lg + +A +++e+A 
  EPX74408.1 2576 ALSYEQLGMWGRAQQLYEQAQ 2596
                  89*****************95 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.006
       TPR_2    2 ealynlGlayyklgdyeeAleafekAleld 31  
                  e +   G+ ++klg+ +eA + + +A+++d
  EPX74408.1 2909 EFYSLKGKFLEKLGKDDEANQTYAAAVQID 2938
                  679999*********************997 PP

>> E2R135  Coiled-coil receptor-binding R-domain of colicin E2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   8.9e-05      0.27      21     112 ..    2065    2161 ..    2055    2186 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 8.9e-05
      E2R135   21 dkniatlnsriast.ekai...pgaraavqeadkkvkeaeankddfvty.nppheygsgwqdqvryldkdiqnqneklkaaqtslnemneslsrdka 112 
                  dkn+ +    ias+ +k+i     +r +v e +  v e +  k+ f +        gs  +  + yl+   +nq e l a  t+ln++ + +++d+ 
  EPX74408.1 2065 DKNLRSGRLNIASSlKKTItilLESRPTVVEDEDEVTEVDEFKQSFTSLlHDNLSNGSNVEATICYLQIIQENQPESLDALLTALNKVFQKIAKDHI 2161
                  67776666666654133441115799********************9862566789************9999********************99974 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.86   2.6e+03      15      39 ..    1291    1317 ..    1288    1320 .. 0.73
   2 ?    1.8   0.2       0.2   5.9e+02       7      28 ..    2575    2596 ..    2571    2604 .. 0.82
   3 ?    7.7   0.1    0.0024       7.2       5      43 ..    2912    2950 ..    2908    2951 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.86
      TPR_14   15 GdpdeAiallrr..alalaPddaeawl 39  
                  G  de i+l+r+  a+a+a dda + +
  EPX74408.1 1291 GLSDELIRLFREtiAIADAEDDALVTM 1317
                  7789********666666677766654 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.2
      TPR_14    7 laeallalGdpdeAiallrral 28  
                   a  +++lG + +A +l+++a 
  EPX74408.1 2575 VALSYEQLGMWGRAQQLYEQAQ 2596
                  57789***************95 PP

  == domain 3  score: 7.7 bits;  conditional E-value: 0.0024
      TPR_14    5 lalaeallalGdpdeAiallrralalaPddaeawlllaq 43  
                   + +++l+ lG+ deA + + +a++ + +  eaw ++++
  EPX74408.1 2912 SLKGKFLEKLGKDDEANQTYAAAVQIDLGLSEAWAEWGR 2950
                  55689******************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (3632 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       652  (0.0363657); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.41u 0.35s 00:00:01.75 Elapsed: 00:00:00.55
# Mc/sec: 20056.42
//
Query:       EPX74409.1  [L=166]
Description: ubiquitin conjugating enzyme Ubc7/UbcP3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-49  167.0   0.0      2e-49  166.8   0.0    1.0  1  UQ_con    Ubiquitin-conjugating enzyme


Domain annotation for each model (and alignments):
>> UQ_con  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.8   0.0   1.1e-53     2e-49       1     138 [.       9     158 ..       9     160 .. 0.98

  Alignments for each domain:
  == domain 1  score: 166.8 bits;  conditional E-value: 1.1e-53
                 HHHHHHHHHHHSTTTTEEEEEEETTEECEEEEEEEB.TTSTTTTEEEEEEEE--TTTTTS--EEEESST-SCTTBETTSBB-CGGGS............ CS
      UQ_con   1 rlqkelkelakkkpsgisaklvddenlfewkvlikgpedtpYeggvFklelefpedYPlkpPkvkfvtkifHPnvdksGevcldiLk............ 87 
                 rl+ke+kel+++ p+gi+a+++d++++f+w++l++gp++tpYegg++ ++l+fp+dYPl pP++kf++++fHPnv+++G+vc++iL+            
  EPX74409.1   9 RLMKEYKELTENGPDGITAGPSDEDDFFHWDCLVQGPDGTPYEGGLYPASLKFPPDYPLGPPTLKFECEFFHPNVYPDGTVCISILHapgddpnmyess 107
                 89*********************99***********************************************************************999 PP

                 TTT--TTSHHHHHHHHHHHHHHS--TTS-SSHHHHHHHHHTHHHHHHHHHH CS
      UQ_con  88 eekWspaltlesvllsiqsLlaepnpesplnkeaakllkkdreeykkkvke 138
                 +e+Wsp++++e++lls++s+laepn+es++n++a+kl++++ e y + v++
  EPX74409.1 108 SERWSPVQSVEKILLSVMSMLAEPNDESGANIDACKLYRENYESYCNVVRK 158
                 888******************************************999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       429  (0.0239277); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.21s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1226.00
//
Query:       EPX74410.1  [L=145]
Description: ribosome biogenesis protein Nop8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-16   60.0   1.6      2e-09   37.5   0.6    2.3  2  Ank_5     Ankyrin repeats (many copies)
    6.5e-16   58.7   1.7    2.5e-15   56.8   0.7    1.9  2  Ank_2     Ankyrin repeats (3 copies)
    8.6e-14   51.7   5.3    5.8e-06   26.7   0.3    2.8  3  Ank_4     Ankyrin repeats (many copies)
    4.3e-11   42.0   1.8    1.3e-06   28.3   0.2    3.4  3  Ank_3     Ankyrin repeat
    6.4e-11   42.2   5.0    3.8e-08   33.4   1.0    2.7  2  Ank       Ankyrin repeat


Domain annotation for each model (and alignments):
>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   5.8e-08   0.00021       2      36 ..      22      56 ..      21      63 .. 0.92
   2 !   37.5   0.6   5.5e-13     2e-09       9      53 ..      64     108 ..      58     111 .. 0.93

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 5.8e-08
       Ank_5  2 lehgpadvnrldgggntpLhvAakygaadvvrlLl 36
                le++p  +nr+d++gn+ Lh+A+ +g+  +v+++l
  EPX74410.1 22 LEKCPSELNRRDENGNSGLHMASANGYTHIVQKIL 56
                788899**************************999 PP

  == domain 2  score: 37.5 bits;  conditional E-value: 5.5e-13
       Ank_5   9 vnrldgggntpLhvAakygaadvvrlLlargadlnltdsrGltal 53 
                 vn+++  gnt++h+Aa +g+ad+++lLl+ gadl l++++ ++a+
  EPX74410.1  64 VNAQNSSGNTAMHWAALNGHADICKLLLETGADLHLKNNHDKSAI 108
                 79**************************************98886 PP

>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.8   0.7   7.1e-19   2.5e-15       2      83 .]       7     101 ..       6     101 .. 0.86
   2 ?    1.5   0.0      0.13   4.6e+02      52      76 ..     103     127 ..      99     144 .. 0.53

  Alignments for each domain:
  == domain 1  score: 56.8 bits;  conditional E-value: 7.1e-19
       Ank_2   2 hlAakngnlelvklLl..egadpn..k.ngktaLhyAakngnleivklLleh........adndgrtpLhyAarsghleivklLlekgadinlkd 83 
                 ++ ++  ++e+++ +l  + +++n  + ng++ Lh A  ng+++iv+ +l h        ++++g+t++h+Aa +gh +i+klLle gad++lk+
  EPX74410.1   7 IYSCRAPDDEMLDEILekCPSELNrrDeNGNSGLHMASANGYTHIVQKILPHlsletvnaQNSSGNTAMHWAALNGHADICKLLLETGADLHLKN 101
                 6677776678999999665566667647**********************99888886655599**********************9****9986 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.13
       Ank_2  52 dgrtpLhyAarsghleivklLlekg 76 
                 + +++++ A   +++++++l+l+++
  EPX74410.1 103 HDKSAIYEADVRNQQKVMELFLDYE 127
                 3444444454444445555555432 PP

>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.0   3.9e-08   0.00014      11      52 ..      12      53 ..       5      56 .. 0.89
   2 !   26.7   0.3   1.6e-09   5.8e-06      27      55 .]      64      91 ..      58      91 .. 0.93
   3 !   16.0   0.3   3.8e-06     0.014       5      40 ..      75     109 ..      75     111 .. 0.86

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 3.9e-08
       Ank_4 11 sgrlelvrlLlek.gadinaqdnrsGetalhiAakrgnveilk 52
                + + e+++ +lek   ++n++ +++G++ lh+A  +g+ +i++
  EPX74410.1 12 APDDEMLDEILEKcPSELNRR-DENGNSGLHMASANGYTHIVQ 53
                67789*******98899****.*******************98 PP

  == domain 2  score: 26.7 bits;  conditional E-value: 1.6e-09
       Ank_4 27 inaqdnrsGetalhiAakrgnveilklLl 55
                +naq n+sG+ta+h Aa++g+ +i klLl
  EPX74410.1 64 VNAQ-NSSGNTAMHWAALNGHADICKLLL 91
                8***.***********************8 PP

  == domain 3  score: 16.0 bits;  conditional E-value: 3.8e-06
       Ank_4   5 LhyaaisgrlelvrlLlekgadinaqdnrsGetalh 40 
                 +h+aa  g+ ++++lLle+gad++   n+ + +a++
  EPX74410.1  75 MHWAALNGHADICKLLLETGADLHLK-NNHDKSAIY 109
                 6*********************9997.776666665 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0     0.024        85       8      30 ..       8      30 ..       6      31 .. 0.83
   2 !    7.4   0.1    0.0022         8       1      24 [.      35      58 ..      35      61 .. 0.91
   3 !   28.3   0.2   3.6e-10   1.3e-06       2      30 ..      71      98 ..      70      99 .. 0.95

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.024
       Ank_3  8 lAarsgnleivkfLlenkgadvn 30
                + +r+ + e+++ +le++  ++n
  EPX74410.1  8 YSCRAPDDEMLDEILEKCPSELN 30
                7899************8877666 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0022
       Ank_3  1 nGetpLhlAarsgnleivkfLlen 24
                nG++ Lh+A  +g + iv+ +l +
  EPX74410.1 35 NGNSGLHMASANGYTHIVQKILPH 58
                79*************99*999874 PP

  == domain 3  score: 28.3 bits;  conditional E-value: 3.6e-10
       Ank_3  2 GetpLhlAarsgnleivkfLlenkgadvn 30
                G+t++h+Aa++g+ +i+k+Lle  gad++
  EPX74410.1 71 GNTAMHWAALNGHADICKLLLE-TGADLH 98
                9*********************.8***97 PP

>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.2   0.00028         1       1      31 [.      35      68 ..      35      69 .. 0.85
   2 !   33.4   1.0     1e-11   3.8e-08       2      32 .]      71     102 ..      70     102 .. 0.96

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00028
                TSBBHHHHHHHHTTHHHHHHHH.T.T.TSTTCBT CS
         Ank  1 dGnTPLHlAatngkkriiklLL.h.G.Anlnald 31
                +Gn+ LH+A+ ng ++i++ +L h +   +na++
  EPX74410.1 35 NGNSGLHMASANGYTHIVQKILpHlSlETVNAQN 68
                79999*****9999*****999887665688887 PP

  == domain 2  score: 33.4 bits;  conditional E-value: 1e-11
                 SBBHHHHHHHHTTHHHHHHHH.TTTSTTCBTT CS
         Ank   2 GnTPLHlAatngkkriiklLL.hGAnlnaldn 32 
                 GnT+ H+Aa ng+++i+klLL  GA+l++++n
  EPX74410.1  71 GNTAMHWAALNGHADICKLLLeTGADLHLKNN 102
                 9********************99******997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       533  (0.0297284); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.41u 0.28s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1036.11
//
Query:       EPX74411.1  [L=464]
Description: ribosome biogenesis protein Nop6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-12   47.6   0.9    4.4e-12   45.6   0.1    2.5  2  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
     0.0011   19.1   0.0     0.0038   17.3   0.0    2.0  1  RRM_7     RNA recognition motif
  ------ inclusion threshold ------
       0.13   12.4   0.0       0.27   11.4   0.0    1.5  1  GerPE     Spore germination protein GerPE


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.6   0.1   7.4e-16   4.4e-12       1      70 []       7      79 ..       7      79 .. 0.93
   2 ?   -1.7   0.1      0.45   2.7e+03      39      53 ..     294     308 ..     271     311 .. 0.55

  Alignments for each domain:
  == domain 1  score: 45.6 bits;  conditional E-value: 7.4e-16
                EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE..TTTSEEEEEEEEESSHHH.HHHHHHHHTTEEETTEEEE CS
       RRM_1  1 lfVgnLppdvteeeLkelFskfGpiksiklvrd..etgkskgfafVeFesked.AekAlealngkklggrelk 70
                +fVg+L++++te++Lk  F+ fG ++++++v +    g+s++fa+V+Fe+ ed  +k++  l + +++g++l+
  EPX74411.1  7 VFVGGLSSTITEDDLKPRFNRFGNVTKFTIVEKqlPVGTSQKFAYVTFETNEDnWKKCKTYLSKATFKGSVLR 79
                8***********************************************9765428999999999999998875 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.45
                 EEEEEEEESSHHHHH CS
       RRM_1  39 kgfafVeFeskedAe 53 
                    a ++Fe+   Ae
  EPX74411.1 294 ESEATITFEDDNKAE 308
                 445667777766665 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   6.3e-07    0.0038       2      29 ..       5      32 ..       4      83 .. 0.77

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 6.3e-07
       RRM_7  2 rkvFvGGlPiDiteeelkatfkefgkvl 29
                ++vFvGGl   ite++lk  f++fg+v+
  EPX74411.1  5 KRVFVGGLSSTITEDDLKPRFNRFGNVT 32
                68***********************985 PP

>> GerPE  Spore germination protein GerPE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   4.6e-05      0.27      27      84 ..     333     393 ..     310     397 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 4.6e-05
       GerPE  27 elkskvlAvqRelslfyknEgrkkefeift...epiplllpetdvklavlhekPvikvrsi 84 
                 e ++ v+ v    ++f +nE ++  f++f    e ++   + + ++++ ++e+P+i+v+s 
  EPX74411.1 333 EKQAAVVNVDNLKEMFTNNENEAAGFSLFGggdEDLSDENEAEYMETEETQEQPFIQVEST 393
                 3455577788899****************76668999999999999*************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (464 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1116  (0.0622455); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 3335.15
//
Query:       EPX74412.1  [L=426]
Description: AP-1 adaptor complex mu subunit Apm1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.1e-92  307.3   0.0      1e-91  307.0   0.0    1.1  1  Adap_comp_sub   Adaptor complexes medium subunit family
    4.9e-07   29.8   0.5      8e-07   29.1   0.5    1.4  1  Clat_adaptor_s  Clathrin adaptor complex small chain
  ------ inclusion threshold ------
      0.017   14.2   0.0      0.025   13.7   0.0    1.2  1  Mon1            Trafficking protein Mon1


Domain annotation for each model (and alignments):
>> Adap_comp_sub  Adaptor complexes medium subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  307.0   0.0   1.7e-95     1e-91       1     263 [.     156     425 ..     156     426 .] 0.98

  Alignments for each domain:
  == domain 1  score: 307.0 bits;  conditional E-value: 1.7e-95
                    XXXXXXXXXXXX-EEEEEEEEEEEEEE-TTS-EEEEEEEEEEEEEE---TT-EEEEEE-SS-EE.......--S.SEESEEEEETT-B-TTHHHH- CS
  Adap_comp_sub   1 iswrrkgikykkneiyldviErvsvlvdkkGkilksevqGtiacksklsgmpelklgLndklnk.......ekk.ielddvsfHqcVnldkfeser 88 
                    iswr++gi+y+kne++ldviE+v+++ +++G+i++s++ G++++k++lsgmpel+lgLndk  +       +++ +e++dv+fHqcV+l++fe++r
     EPX74412.1 156 ISWRSEGIHYRKNEVFLDVIESVNLIAAPDGTIIQSDILGKVHLKCFLSGMPELRLGLNDKVLFeaagrtiKGNaVEMEDVKFHQCVRLARFENDR 251
                    69*******************************************************************997778********************* PP

                    EEEE---SEEEEEEEEEES--SS--SEEEEEEEEE-TTTSEEEEEEEEEE-S-TT-EEEEEEEEEE--TT-EEEEEEESSTT-EEEEETTEEEEEE CS
  Adap_comp_sub  89 visFiPpdgeftLmrYrlsannvklPfsvkpkvklsgdevrveielklkenfkkkltlenvkisiplpkevsnlaiktskGkakynpeenaleWti 184
                    +isFiPpdgef+Lm+Yrl ++n+++ ++v++   +++  +rve+++k+k++fkk+  ++nvki ip+p+++++++++ s+G+++y pe+ a++W+i
     EPX74412.1 252 TISFIPPDGEFDLMSYRL-SSNSRPLIWVECDSVVHSG-SRVEYMVKAKAQFKKRCIANNVKIIIPVPEDADSPRFQSSNGHVQYAPEQAAMIWNI 345
                    ******************.*************999777.********************************************************* PP

                    --EETT-EE..EEEEEEE--------------.EEEEEEEET--SS---EEEEEEE--.-----EEEEEEEEEEE.EEEE- CS
  Adap_comp_sub 185 kklpggnesslsgeleleaesekkeenprdgklvsveFkipgftaSgikVeslkveer.esykpfkwvryvtvsg.eyeir 263
                    kk+ gg+e+ +++e+ l++ + ++ +++ + + v+++F+ip+ft+Sgi+V++lk+ e+  +y  ++wvryvt+ g ey+ir
     EPX74412.1 346 KKFSGGKECFMRAEMGLPSVQGEETTKRVKRP-VQMSFAIPYFTTSGIQVRYLKITEPkLNYHAMPWVRYVTQNGkEYAIR 425
                    ****************************9999.*************************9*******************998 PP

>> Clat_adaptor_s  Clathrin adaptor complex small chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1   0.5   1.3e-10     8e-07       2     133 ..       2     133 ..       1     142 [. 0.82

  Alignments for each domain:
  == domain 1  score: 29.1 bits;  conditional E-value: 1.3e-10
                     EEEEEEE-TTS-EEEEEES.SSS-CHHHHHHHHHHHHHHHTT-SSS...-SEEEETTEEEEEEEETTEEEEEEEETTS-HHHHHHHHHHHHHHHH CS
  Clat_adaptor_s   2 ikaililnkkgkvrlakfy.tavddkkkqklieevyelvsaRdskl...sniveledlkviYkryasLYFvvivdeqeneliilelihlfvesLd 92 
                       a++iln kgk+ + + y   ++      ++e+ + l+++ +++    +  +  e+++ iY +  ++Y +   + + + + +l  ++++ + + 
      EPX74412.1   2 ASAVFILNLKGKPIISRDYrADIPM----SAVEKFTPLITEVEEENgcvTPCLTHEGINYIYVQHNDVYLLALSKRNTDAMEMLVFLRKLADLFI 92 
                     5799*************99544444....4455555555555444444388899999************************************** PP

                     HHCTS-SHHHHHHCHHHHHHHHHCCEETTEES---HHHHHH CS
  Clat_adaptor_s  93 kyfgnVceldlvfnfekvylildEivsgGeiletskkevlk 133
                      yf++ +e  +  nf  vy +ldE+++ G  + t++k + +
      EPX74412.1  93 DYFKELQEESIRDNFVLVYELLDEVMDFGFPQTTETKILQE 133
                     ****************************9887776654444 PP

>> Mon1  Trafficking protein Mon1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   4.2e-06     0.025       9      91 ..       5      87 ..       2     113 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 4.2e-06
                EEEEETTS-EEEESSS-HHHHHHHHHHHHHHHHHHH.HTT--EEEEEETTEEEEEEEETTEEEEEEE-SS--HHHHHHHHHHH CS
        Mon1  9 ffilSsAGKPIYsrygseeklsslmGviqaivsffeenekdelksitagdtkfvflnkspliLvaiskteesesqlrkqLell 91
                +fil   GKPI sr    +  +s +   + ++  +ee+++    ++t++ +++++++ + ++L+a sk++ ++ ++   L+ l
  EPX74412.1  5 VFILNLKGKPIISRDYRADIPMSAVEKFTPLITEVEEENGCVTPCLTHEGINYIYVQHNDVYLLALSKRNTDAMEMLVFLRKL 87
                8***********************************87777778999999******************999888877666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (426 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       551  (0.0307323); expected 358.6 (0.02)
Passed bias filter:                      468  (0.026103); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.22s 00:00:00.75 Elapsed: 00:00:00.39
# Mc/sec: 3276.62
//
Query:       EPX74413.1  [L=448]
Description: flavin dependent monooxygenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-34  119.6   0.0    2.2e-20   72.6   0.0    3.0  3  FMO-like       Flavin-binding monooxygenase-like
    8.3e-13   48.6   0.0    2.5e-11   43.8   0.0    2.6  2  NAD_binding_9  FAD-NAD(P)-binding
    1.3e-12   47.6   0.1    2.6e-07   30.2   0.0    3.2  3  Pyr_redox_3    Pyridine nucleotide-disulphide oxidoreductase
    1.2e-07   31.3   0.0    9.8e-07   28.3   0.0    2.0  1  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
    3.3e-07   29.8   0.2    5.2e-05   22.5   0.0    2.7  3  K_oxygenase    L-lysine 6-monooxygenase (NADPH-requiring)
    3.6e-06   26.8   0.0     0.0054   16.4   0.0    2.6  3  DAO            FAD dependent oxidoreductase
    7.9e-06   26.0   0.0    1.7e-05   24.9   0.0    1.6  1  NAD_binding_8  NAD(P)-binding Rossmann-like domain
    0.00088   18.6   0.1     0.0014   17.9   0.1    1.3  1  Thi4           Thi4 family
  ------ inclusion threshold ------
       0.02   13.6   0.1      0.029   13.1   0.1    1.2  1  HI0933_like    HI0933-like protein
      0.068   13.4   0.0         18    5.5   0.0    2.2  2  baeRF_family5  Bacterial archaeo-eukaryotic release factor fa
        0.1   12.1   0.0       0.28   10.7   0.0    1.6  2  Glu_dehyd_C    Glucose dehydrogenase C-terminus
       0.17   11.1   0.1       0.36   10.0   0.0    1.5  2  FAD_binding_3  FAD binding domain


Domain annotation for each model (and alignments):
>> FMO-like  Flavin-binding monooxygenase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0     2e-06     0.003       3      44 ..       8      51 ..       6      56 .. 0.85
   2 !   72.6   0.0   1.5e-23   2.2e-20      53     207 ..      84     236 ..      81     249 .. 0.88
   3 !   27.5   0.0     7e-10     1e-06     302     442 ..     260     410 ..     248     416 .. 0.70

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 2e-06
    FMO-like  3 kvaviGaGvsGlasikccleeg.lep.tcfersddiGGlwrfke 44
                 +a+iGaG sGl++ k+ l e  +e  + fer    GG+w+++ 
  EPX74413.1  8 SIAIIGAGPSGLVTAKSLLAEKaFERiVLFERRGSAGGVWNYTS 51
                69****************98752675267************986 PP

  == domain 2  score: 72.6 bits;  conditional E-value: 1.5e-23
    FMO-like  53 iyksvvsnsskemscfsdfplpedypnflhnsklleylklfakefdllkyiqfkttvcsvkkrpdfstsGqwevv...tekegkkesavfdavmvctGh 148
                 +y+ + +n+  e++ +s + +p++   f h+  ++ey ++fa+   ll +i+  t v+ v+k+++     +w+v+   t++    + + fdav +c Gh
  EPX74413.1  84 LYRDLQTNTPIELMGYSTHQFPKETLQFPHRTSVQEYQRTFAE--PLLPFIKRATEVIDVEKKNN-----KWHVTyrnTKEGSPSNEESFDAVAICNGH 175
                 899***************************************8..59***************875.....7887633244445578899********** PP

    FMO-like 149 hvnphlplesfpGiekfk....GqyfhsrdykepevfkgkrvlviGlGnsggdiavelsrtae 207
                 +  p++p    pG++++     G ++h+ +++epe f++ rvl++G   s+ d+   l   a+
  EPX74413.1 176 YEIPFIPN--VPGLQQYAervpGSVLHASQFREPELFTNERVLIVGGASSANDLVRHLQPLAK 236
                 *******5..899987643333999*****************************998887776 PP

  == domain 3  score: 27.5 bits;  conditional E-value: 7e-10
    FMO-like 302 vkelt.etsaif.edgtveedidvvifatGytfafpf.....l.eeslvkvekn...kvslykkvfpanlekptlaiiGliqplGsilptvelqarwav 389
                 + ++  et  if +dg + ++id vi++tGy ++ pf     l +++  k++++      +y+++f   +  p la +Gl   +   +pt++ qa + +
  EPX74413.1 260 IMKFDpETREIFlKDGKILKEIDRVIYCTGYLYNIPFpslnkLnDNPETKLVTDgthVHNVYQHIFY--IPDPNLAFVGLALHV-VPFPTSQAQAAYLA 355
                 444432777777589*****************99888554442234445554431103457888885..679*******97654.679*********** PP

    FMO-like 390 rvlkGlkklpsekel...leeitekkekkakrfgesksktiqtdyiayldelaali 442
                 rv  G   lp  +e     +++ +  +  ++++  s     +++yi+y+++l+   
  EPX74413.1 356 RVWSGRLSLPHPQEQrewQDQLVNSLDGSMSLYH-SMNFPKDAEYINYIHDLTLQA 410
                 *********9876651114455566666666666.444456789******998654 PP

>> NAD_binding_9  FAD-NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.8   0.0   1.7e-14   2.5e-11       1     155 [.      10     175 ..      10     176 .. 0.80
   2 ?    1.8   0.0      0.15   2.2e+02     129     155 ..     263     290 ..     255     291 .. 0.86

  Alignments for each domain:
  == domain 1  score: 43.8 bits;  conditional E-value: 1.7e-14
  NAD_binding_9   1 aivGaGprGlavlerLlarakkkspleitlfdpsepgagrvwrtdqseelllNvpasemslftddp...........ptfaeWlrerga....... 78 
                    ai+GaGp+Gl +++ Lla+   k+  +i lf+++++  g+vw+ + s    + +p+ + +l  + p             +++ l+++         
     EPX74413.1  10 AIIGAGPSGLVTAKSLLAE---KAFERIVLFERRGSA-GGVWNYTSSLPSKIPTPSTKPNLSSN-PilqpsalpvypSPLYRDLQTNTPielmgys 100
                    8******************...6999**********8.9******8776677777777776654.4699999999998888889988876655433 PP

  NAD_binding_9  79 leeaeeldpddfvpRalyGrYlrdlfeellarlpegvtvevhraevvdleeradgqavll...adg...aslaadaVvLAlGh 155
                    ++     +  +f+ R  +++Y+r ++e ll   +         +ev+d+e+++++++v+    ++g   ++  +daV ++ Gh
     EPX74413.1 101 TH-QFPKETLQFPHRTSVQEYQRTFAEPLLPFIK-------RATEVIDVEKKNNKWHVTYrntKEGspsNEESFDAVAICNGH 175
                    11.23445779*******************6665.......479***********98887332222333458**********9 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.15
  NAD_binding_9 129 eradgqavlladgasl.aadaVvLAlGh 155
                     +++++++ l+dg+ l ++d+V+ ++G 
     EPX74413.1 263 FDPETREIFLKDGKILkEIDRVIYCTGY 290
                    4677889999****998*********96 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.0    0.0022       3.4       2      30 ..      11      40 ..      10      52 .. 0.75
   2 !   30.2   0.0   1.8e-10   2.6e-07      76     182 ..     110     230 ..      93     237 .. 0.80
   3 !    8.3   0.0    0.0008       1.2     208     286 ..     229     309 ..     225     327 .. 0.65

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0022
  Pyr_redox_3  2 IiGaGPaGlaaaiel.kkagledylilEkg 30
                 IiGaGP Gl +a  l  ++ +e+++  E+ 
   EPX74413.1 11 IIGAGPSGLVTAKSLlAEKAFERIVLFERR 40
                 9********999875256666777777765 PP

  == domain 2  score: 30.2 bits;  conditional E-value: 1.8e-10
  Pyr_redox_3  76 eklsrkealeYlrevaksfelpiklfeeVesvkkedegfevetske.......tyeAkkviiAtGefdkPnklnipGeeklvk.......hyskvkef 159
                  + ++r  + eY r+ a+     ik  +eV +v+k++++ +v+ ++        + + + v i  G +++P  +n+pG +++++       h s+++e+
   EPX74413.1 110 QFPHRTSVQEYQRTFAEPLLPFIKRATEVIDVEKKNNKWHVTYRNTkegspsnEESFDAVAICNGHYEIPFIPNVPGLQQYAErvpgsvlHASQFREP 207
                  5788999999999999998888*******************865541123332344568******************99743223334449******* PP

  Pyr_redox_3 160 hkyagqkvvViGgknSavDaAle 182
                  + +++++v+++Gg  Sa D   +
   EPX74413.1 208 ELFTNERVLIVGGASSANDLVRH 230
                  *****************997655 PP

  == domain 3  score: 8.3 bits;  conditional E-value: 0.0008
  Pyr_redox_3 208 yslkpdienrleelvke..ekikvlfnaevkeikekeeeykvktedgkkvevkddvvlatGykpdlsflkkslfeldedgr 286
                   +l+p  +n + + + +  e+++    +  + +k + e+ ++  +dgk +++ d+v+++tGy  ++ f + ++++++ +++
   EPX74413.1 229 RHLQPLAKNPIYQSLLNveESVDDKLIKVPQIMKFDPETREIFLKDGKILKEIDRVIYCTGYLYNIPFPSLNKLNDNPETK 309
                  67777777777666665555555544444444455556678999******************9999886644554443333 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.3   0.0   6.6e-10   9.8e-07       2     167 ..       8     237 ..       7     331 .. 0.74

  Alignments for each domain:
  == domain 1  score: 28.3 bits;  conditional E-value: 6.6e-10
                  SEEEE--SHHHHHHHHHHHH..HTS-EEEEE...TTHCHHHCSHHHHCHHHHHHHHHHHHH..................................... CS
                  xxxxxxxxxxxxxxxxxxxx..xxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxx..................................... RF
  Pyr_redox_2   2 dvvviGgGpAGlaaaltlaq..agakvtlve...legtclnggcllskallgvaedaeias..................................... 57 
                  ++++iG+Gp Gl +a+ l +  a  +++l+e   + g + n + +l++++   + +++  s                                     
   EPX74413.1   8 SIAIIGAGPSGLVTAKSLLAekAFERIVLFErrgSAGGVWNYTSSLPSKIPTPSTKPNLSSnpilqpsalpvypsplyrdlqtntpielmgysthqfp 105
                  799**************999655679999988885555556666666666666777777778************************************ PP

                  .............HHHHCHHHHCCCCHC..........CTCEEEEESCEEEEETEEEC...TCEEEEEESEEEE---E..EE-BCTCTTC.TTBEECC CS
                  .............xxxxxxxxxxxxxxx..........xxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2  58 .............evvkklnqgielllg..........eevvkidpgkkkvklekkke...gdeekiaydklvlAtGs..sprdlgipGvaenvgklv 127
                               e        +++  +          +ev+++++++ k +++ +++   +  ++  +d++ ++ G    p+++++pG+++++ ++ 
   EPX74413.1 106 ketlqfphrtsvqE--------YQRTFAepllpfikraTEVIDVEKKNNKWHVTYRNTkegSPSNEESFDAVAICNGHyeIPFIPNVPGLQQYAERVP 195
                  99888876644431........22222244445555555688888766655554444444655567899********75578888*****88888887 PP

                  SECHHHHHHCCSS-T..SEEEEES-SHHHHHHHHHHHHHT-E CS
                  xxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 128 rtldsaealklkllp..krivvvGgGyiGvElAaalaklgke 167
                   ++ +a ++++ +l   +r+++vGg   + +l  +l  l+k+
   EPX74413.1 196 GSVLHASQFREPELFtnERVLIVGGASSANDLVRHLQPLAKN 237
                  78888888888877788********99999988888877774 PP

>> K_oxygenase  L-lysine 6-monooxygenase (NADPH-requiring)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.017        25     192     225 ..       7      40 ..       3      50 .. 0.68
   2 !   22.5   0.0   3.5e-08   5.2e-05      84     211 ..     103     232 ..     100     250 .. 0.82
   3 ?   -1.3   0.0      0.62   9.2e+02     328     340 ..     278     290 ..     261     292 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.017
  K_oxygenase 192 kriaVvGsGqSaaeifedllrrqkkvelklvtrs 225
                  ++ia++G+G S+   ++ ll++++   + l+ r+
   EPX74413.1   7 RSIAIIGAGPSGLVTAKSLLAEKAFERIVLFERR 40 
                  5677777777777777777766666666665555 PP

  == domain 2  score: 22.5 bits;  conditional E-value: 3.5e-08
  K_oxygenase  84 kFlnletflpsRkefedYlrWvasqleeqvrfgeeveevepdeeeeeelltveskdaegeeeelearnlvlgvGtepkiPev..lekle..gkervvH 177
                  +F     ++p+R+  ++Y r  a+ l   ++ ++ev +ve ++++ +  ++ +++ +  +ee++ a +++ g    p iP+v  l+++       v+H
   EPX74413.1 103 QFPKETLQFPHRTSVQEYQRTFAEPLLPFIKRATEVIDVEKKNNKWHVTYRNTKEGSPSNEESFDAVAICNGHYEIPFIPNVpgLQQYAerVPGSVLH 200
                  6667778999**************999989999999999998876556677666667788999*******99999999998755455543434789** PP

  K_oxygenase 178 sseylerkeellakkriaVvGsGqSaaeifedll 211
                  +s++ e +  l +++r+++vG+  Sa +++++l 
   EPX74413.1 201 ASQFREPE--LFTNERVLIVGGASSANDLVRHLQ 232
                  ***98887..9*******************9996 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 0.62
  K_oxygenase 328 tlevdavvlATGY 340
                    e+d+v+++TGY
   EPX74413.1 278 LKEIDRVIYCTGY 290
                  5689********* PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   3.6e-06    0.0054       2      35 ..       9      45 ..       8      76 .. 0.83
   2 !    7.7   0.0    0.0015       2.3     164     228 ..     133     202 ..     107     252 .. 0.75
   3 ?   -1.8   0.0       1.2   1.9e+03     190     227 ..     277     327 ..     256     391 .. 0.53

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 3.6e-06
                EEEECTSHHHHHHHHHHHHTT....EEEEESSSSTTSS CS
         DAO  2 vviiGGGiiGlstAyeLarrg....Vtllekgdiagsg 35
                ++iiG+G  Gl tA  L +++    ++l+e++  ag g
  EPX74413.1  9 IAIIGAGPSGLVTAKSLLAEKaferIVLFERRGSAG-G 45
                89***************76656889*******7766.4 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.0015
                 EESECEEEEEEEETCEEEEE.EECT.EEEE...EEEEEEE--GGGHH.HHHTTCTTTSEEEEEEEEEEEEE CS
         DAO 164 legtevtgleeedgkvwgve.rttp.gend...aadavVnaaGawsd.llgllkeldlpispvrgqvlvlk 228
                  + tev ++e++++k w+v  r+t+ g+ +   ++dav +++G++   ++++++ l++  + v g+vl+ +
  EPX74413.1 133 KRATEVIDVEKKNNK-WHVTyRNTKeGSPSneeSFDAVAICNGHYEIpFIPNVPGLQQYAERVPGSVLHAS 202
                 45699****998877.*****65655765346778*********933333333444444455666666654 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 1.2
                 E.EEEEEEEE--GGGHH.HHHTTCTT..........T.SEEEEEEEEEEEE CS
         DAO 190 n.daadavVnaaGawsd.llgllkel..........d.lpispvrgqvlvl 227
                 + +++d v+ ++G   +  ++ l++l          d   ++ v  +++ +
  EPX74413.1 277 IlKEIDRVIYCTGYLYNiPFPSLNKLndnpetklvtDgTHVHNVYQHIFYI 327
                 444678888888855544222221122222233333223445555555555 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.0   1.2e-08   1.7e-05       1      35 [.      11      47 ..      11      57 .. 0.84

  Alignments for each domain:
  == domain 1  score: 24.9 bits;  conditional E-value: 1.2e-08
                   EE--SHHHHHHHHHHHCC.TE.EEEEE-SSSSSSGGG CS
  NAD_binding_8  1 IvGaGlsGlvaAylLaka.gf.dvlllekrdrlGGra 35
                   I+GaG sGlv+A  L  +  f +++l+e+r + GG +
     EPX74413.1 11 IIGAGPSGLVTAKSLLAEkAFeRIVLFERRGSAGGVW 47
                   9***********87655516678***********965 PP

>> Thi4  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.1   9.6e-07    0.0014      19      58 ..       8      47 ..       2      57 .. 0.79

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 9.6e-07
                EEEEE--SHHHHHHHH.HHHHCTTS-EEEEESSSS--TTTT CS
        Thi4 19 DvvivGaGssGLtaay.ylakkpdlkvailersvspGGGaw 58
                 ++i+GaG+sGL +a+  la+k   +++++er+ s GG +w
  EPX74413.1  8 SIAIIGAGPSGLVTAKsLLAEKAFERIVLFERRGSAGG-VW 47
                589*********77761567776678999999988765.55 PP

>> HI0933_like  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1     2e-05     0.029       2      36 ..       8      44 ..       7      46 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 2e-05
                 SEEEE--SHHHHHHHHHH..HHTT--EEEE-SSSSS- CS
  HI0933_like  2 dviviGgGaAGlmaAisa..akrgkrVlllekakklg 36
                 ++++iG+G++Gl +A s+  +k+ +r++l+e+  ++g
   EPX74413.1  8 SIAIIGAGPSGLVTAKSLlaEKAFERIVLFERRGSAG 44
                 589************9986678889999*99987766 PP

>> baeRF_family5  Bacterial archaeo-eukaryotic release factor family 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0     0.013        19      53      89 ..     114     150 ..      95     153 .. 0.86
   2 ?    5.5   0.0     0.012        18      88     123 ..     213     248 ..     209     253 .. 0.93

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.013
  baeRF_family5  53 sgskdefeerfeenqqRwyKslaskleklakerewee 89 
                     +s+ e+++ f e    + K+ ++ ++ ++k+++w+ 
     EPX74413.1 114 RTSVQEYQRTFAEPLLPFIKRATEVIDVEKKNNKWHV 150
                    4668899****************************86 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.012
  baeRF_family5  88 eeiylvGekeeakeleeelnkkvkevieknllnkee 123
                    e++ +vG + +a++l ++l+  +k+ i++ lln ee
     EPX74413.1 213 ERVLIVGGASSANDLVRHLQPLAKNPIYQSLLNVEE 248
                    7899****************************9887 PP

>> Glu_dehyd_C  Glucose dehydrogenase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00018      0.28      32      67 ..       7      41 ..       4      49 .. 0.89
   2 ?   -3.7   0.0       4.7   7.1e+03      99     111 ..     279     291 ..     276     305 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00018
  Glu_dehyd_C 32 esalvlGaGslGLLalalleaeerglervyvlgrrd 67
                 +s  ++GaG+ GL+++  l a e+++er+  ++rr 
   EPX74413.1  7 RSIAIIGAGPSGLVTAKSLLA-EKAFERIVLFERRG 41
                 6789***************97.799****9999985 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 4.7
  Glu_dehyd_C  99 eemdlvvEaTGsa 111
                  +e+d v+ +TG+ 
   EPX74413.1 279 KEIDRVIYCTGYL 291
                  68899999**995 PP

>> FAD_binding_3  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   0.00024      0.36       4      21 ..       9      26 ..       7      43 .. 0.76
   2 ?   -3.8   0.0       3.9   5.8e+03     132     245 ..     142     165 ..     129     193 .. 0.60

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00024
                   EEEE--SHHHHHHHHHHH CS
  FAD_binding_3  4 VlIVGaGpaGlmlallLs 21
                   ++I+GaGp+Gl++a+ L 
     EPX74413.1  9 IAIIGAGPSGLVTAKSLL 26
                   68************8653 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 3.9
                    EECCCCCCCEEEECCTTEEEEEEEEEEEE--GTT-HHHHHHTGGEEEEEEEEEEEEEEEEEEC-SCCCTTCCEEEEECCTTEEEEEECCETEEEEE CS
  FAD_binding_3 132 eqdeegvtaevrdketgeeetvrakYlvGaDGgrStvrktlgiefegeetvyeagvldvlfdadlsdiveplvlilsaesrgvmviPlentlerfy 227
                    e+ ++                                                                                           
     EPX74413.1 142 EKKNN------------------------------------------------------------------------------------------K 147
                    33333..........................................................................................3 PP

                    EEEECCE-GGGSCCCHHH CS
  FAD_binding_3 228 vqvearaekeersekfte 245
                    ++v++r++ke+++ +++ 
     EPX74413.1 148 WHVTYRNTKEGSPSNEES 165
                    555555555555555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (448 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       370  (0.020637); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.60u 0.29s 00:00:00.88 Elapsed: 00:00:00.48
# Mc/sec: 2814.50
//
Query:       EPX74414.1  [L=302]
Description: CCAAT-binding factor complex subunit Php4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.4e-06   28.2   8.7    1.4e-06   28.2   8.7    3.0  3  Hap4_Hap_bind  Minimal binding motif of Hap4 for binding to H
  ------ inclusion threshold ------
      0.039   14.0   1.0      0.075   13.0   1.0    1.5  1  DUF3338        Domain of unknown function (DUF3338)
       0.47   10.6   4.7        1.3    9.2   4.7    1.8  1  bZIP_2         Basic region leucine zipper


Domain annotation for each model (and alignments):
>> Hap4_Hap_bind  Minimal binding motif of Hap4 for binding to Hap2/3/5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.2   8.7   2.4e-10   1.4e-06       2      17 .]      28      43 ..      27      43 .. 0.98
   2 ?   -2.9   2.4       1.4   8.6e+03       7      13 ..      53      59 ..      53      59 .. 0.83
   3 ?   -2.3   1.9      0.93   5.6e+03       9      13 ..     280     284 ..     280     284 .. 0.91

  Alignments for each domain:
  == domain 1  score: 28.2 bits;  conditional E-value: 2.4e-10
  Hap4_Hap_bind  2 SKnWVLPPRpKPGRKP 17
                   SK WV+PPRpKPGRKP
     EPX74414.1 28 SKQWVVPPRPKPGRKP 43
                   9**************9 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.4
  Hap4_Hap_bind  7 LPPRpKP 13
                   +P +pKP
     EPX74414.1 53 IPIKPKP 59
                   6779**9 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 0.93
  Hap4_Hap_bind   9 PRpKP 13 
                    ++pKP
     EPX74414.1 280 QKPKP 284
                    89**9 PP

>> DUF3338  Domain of unknown function (DUF3338)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   1.0   1.3e-05     0.075      17      70 ..      68     120 ..      60     138 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.3e-05
     DUF3338  17 sgskssessekqkkekvaalkkkqkaleerLelkleelkklClrEAeltGklpk 70 
                 + + + +++e+q +e + +l++k++ l e+Le+  ++++ +Cl E ++t  l+ 
  EPX74414.1  68 TEQTQFHVREEQYQELIGELQRKNNLLLEQLEAMHKQMRNVCL-ERNVTPPLSV 120
                 6677889999********************************9.5555555555 PP

>> bZIP_2  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   4.7   0.00022       1.3      26      53 ..      76     103 ..      74     104 .. 0.93

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00022
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_2  26 keeeleervkeLeeeNaqLrqkveqLek 53 
                 +ee+ +e + eL+++N+ L++++e++ k
  EPX74414.1  76 REEQYQELIGELQRKNNLLLEQLEAMHK 103
                 899**********************977 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       802  (0.044732); expected 358.6 (0.02)
Passed bias filter:                      543  (0.0302861); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2191.75
//
Query:       EPX74415.1  [L=454]
Description: CUE domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-11   42.7   0.0      2e-10   40.1   0.0    2.2  2  CUE       CUE domain


Domain annotation for each model (and alignments):
>> CUE  CUE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.1   0.0   1.1e-14     2e-10       1      41 [.      18      58 ..      18      59 .. 0.93
   2 ?   -0.9   0.0     0.081   1.4e+03      15      30 ..     304     319 ..     303     325 .. 0.84

  Alignments for each domain:
  == domain 1  score: 40.1 bits;  conditional E-value: 1.1e-14
                CHHHHHHHHHHSTTS-HHHHHHHHHHCTTTHHHHHHHHHHC CS
         CUE  1 reqmletLkemFPdldeevIravLrasngnvEatinaLLeg 41
                +eq+  tLke+FPd d+ +IravL as+  +E+++naLL +
  EPX74415.1 18 HEQAKATLKEAFPDTDDAIIRAVLAASGFHIEPAFNALLGL 58
                567778********************************976 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.081
                 S-HHHHHHHHHHCTTT CS
         CUE  15 ldeevIravLrasngn 30 
                 ld+++++  +++++g 
  EPX74415.1 304 LDDSDLESTYEEETGK 319
                 89999**999999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (454 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2234  (0.124603); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                       114  (0.00635841); expected 17.9 (0.001)
Passed Fwd filter:                        32  (0.00178482); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.95u 0.31s 00:00:01.26 Elapsed: 00:00:00.47
# Mc/sec: 2915.03
//
Query:       EPX74416.1  [L=242]
Description: inner membrane protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-28   98.5   0.0      3e-28   97.9   0.0    1.2  1  Coa1      Cytochrome oxidase complex assembly protein 1


Domain annotation for each model (and alignments):
>> Coa1  Cytochrome oxidase complex assembly protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.9   0.0   1.7e-32     3e-28       3     115 ..     122     233 ..     120     235 .. 0.98

  Alignments for each domain:
  == domain 1  score: 97.9 bits;  conditional E-value: 1.7e-32
        Coa1   3 tfavfvvgvvvalayifnyektsssivrsvlyqlrrspevrelLGeeipfkssipwisGelntvkGkidlsfpvkGskgeGtvyltaeResktepfeil 101
                 +fa+f+v+++++ +y++ y k++s++++ v+y++++s+e+  lLG++i+f+  +pwi+G+l++  G id+sf+v+Gs++ G+v+++++R  +  ++  l
  EPX74416.1 122 LFAFFCVVWAACAFYAIHYGKQNSNVTQIVMYRVQHSNEALILLGDNIQFRYPFPWIKGKLHKRYGIIDISFEVTGSQNLGVVHYKSQRFGPIPHWVEL 220
                 6899*********************************************************************************************** PP

        Coa1 102 efsvevddgkkidL 115
                 e+s++ + gk+i L
  EPX74416.1 221 ECSLTSN-GKTIPL 233
                 *******.**9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       481  (0.026828); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.47
# Mc/sec: 1548.97
//
Query:       EPX74417.1  [L=142]
Description: hypothetical protein SOCG_03626 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0039   17.3   0.0     0.0071   16.5   0.0    1.7  1  PAC3             Proteasome assembly chaperone 3
  ------ inclusion threshold ------
      0.016   14.1   0.0       0.02   13.8   0.0    1.1  1  Integrin_alpha2  Integrin alpha
       0.09   12.6   0.0       0.14   12.0   0.0    1.3  1  DUF3703          Protein of unknown function (DUF3703)


Domain annotation for each model (and alignments):
>> PAC3  Proteasome assembly chaperone 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   1.2e-06    0.0071       1      54 [.      30      91 ..      30     135 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 1.2e-06
        PAC3  1 vviTqigkiGtlvsvt........pdsksdelseptytvrvllGkdddllrvyarqLiekis 54
                +++T +gkiG+++ vt           ++d++s p + vr++lG+ dd      + L+ +++
  EPX74417.1 30 LIVTMTGKIGQMFMVTyersvvspLVLNEDMSSLPEIGVRTILGDRDDFKAQWGQLLASQVG 91
                69**************8877777666677777788**********66666666666666655 PP

>> Integrin_alpha2  Integrin alpha
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   3.4e-06      0.02     355     390 ..      97     135 ..      82     140 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 3.4e-06
                      XXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXX CS
  Integrin_alpha2 355 yeiqNkGpstvpeaeleiqwPlelsngk...wLLYlldv 390
                       +i+N+G+s+vp++ l +++P+ ls++k      Yl+++
       EPX74417.1  97 QQIHNTGNSKVPKLCLGLHVPWDLSDEKngdLVVYLMEL 135
                      58***********************99988766788875 PP

>> DUF3703  Protein of unknown function (DUF3703)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   2.4e-05      0.14      59      96 ..      73     110 ..      65     121 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.4e-05
     DUF3703  59 kdlkEvlGQilRlllalvgsllgrvPegNtGganvsal 96 
                 +d+ +  +Q+  ll+  vgsll +    NtG+++v+ l
  EPX74417.1  73 GDRDDFKAQWGQLLASQVGSLLAKQQIHNTGNSKVPKL 110
                 577888899999***********************865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       260  (0.0145016); expected 358.6 (0.02)
Passed bias filter:                      232  (0.0129399); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 1015.37
//
Query:       EPX74418.1  [L=164]
Description: poly(A) binding protein Pab2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.9e-17   60.5   0.0    2.6e-16   59.2   0.0    1.7  2  RRM_1        RNA recognition motif. (a.k.a. RRM, RBD, or RNP 
     0.0092   15.7   6.1      0.013   15.2   6.1    1.2  1  DivIC        Septum formation initiator
  ------ inclusion threshold ------
      0.023   15.1   0.2      0.034   14.5   0.2    1.3  1  Flagellin_C  Bacterial flagellin C-terminal helical region
      0.036   13.4   3.2      0.045   13.1   3.2    1.1  1  GAS          Growth-arrest specific micro-tubule binding
      0.058   13.0   2.2      0.069   12.7   2.2    1.1  1  PEARLI-4     Arabidopsis phospholipase-like protein (PEARLI 4
      0.072   12.4   3.6      0.088   12.1   3.6    1.1  1  DUF3450      Protein of unknown function (DUF3450)
       0.13   12.3   3.4       0.16   12.0   3.4    1.1  1  DUF2514      Protein of unknown function (DUF2514)
       0.15   12.4   4.5       0.19   12.1   4.5    1.2  1  OmpH         Outer membrane protein (OmpH-like)
       0.15   10.9   4.0       0.21   10.5   4.0    1.1  1  Spc7         Spc7 kinetochore protein
       0.29    9.3   2.2       0.35    9.0   2.2    1.0  1  COG6         Conserved oligomeric complex COG6
       0.31   10.9   5.4       0.38   10.5   5.4    1.1  1  DUF724       Protein of unknown function (DUF724)
       0.36    8.7   1.0       0.39    8.6   1.0    1.0  1  V_ATPase_I   V-type ATPase 116kDa subunit family
       0.67   10.2   3.0       0.92    9.8   3.0    1.2  1  Spc24        Spc24 subunit of Ndc80
          3    8.4  10.7        3.9    8.0  10.7    1.1  1  APG6_N       Apg6 coiled-coil region
        6.4    6.7   5.1        8.5    6.3   5.1    1.1  1  EMP24_GP25L  emp24/gp25L/p24 family/GOLD


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       3.3   3.9e+03       9      18 ..       8      17 ..       6      30 .. 0.75
   2 !   59.2   0.0   2.1e-19   2.6e-16       1      70 []      57     126 ..      57     126 .. 0.98

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 3.3
                TSSHHHHHHH CS
       RRM_1  9 dvteeeLkel 18
                d+ e+eL+e+
  EPX74418.1  8 DTQEKELREM 17
                7888888886 PP

  == domain 2  score: 59.2 bits;  conditional E-value: 2.1e-19
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrelk 70 
                 ++Vgn+ ++vt eeL  +F+ +G+i+++++ +d  tg +kgfa+VeF  ++   +Al  lng +l+ r+lk
  EPX74418.1  57 VYVGNVDYSVTPEELQSHFGSCGSINRVTILCDkFTGHPKGFAYVEFSEPSLIPNALL-LNGSMLHERPLK 126
                 8*********************************************************.*******99986 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   6.1   1.1e-05     0.013      18      60 ..      13      55 ..       6      56 .. 0.92

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.1e-05
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-XXXXXXXXXX CS
       DivIC 18 aykqlkqeiaalqaelaklkaeneeLeaevkdLksdedyieer 60
                 ++++k+ +a+ +ae akl+a +e+L+ e + L++d++ i+++
  EPX74418.1 13 ELREMKERVAEMEAEAAKLRAMQEQLDNESEALRNDRESIDAQ 55
                6889************************************987 PP

>> Flagellin_C  Bacterial flagellin C-terminal helical region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.2   2.9e-05     0.034       5      53 ..      18      66 ..      14      74 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 2.9e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCHHCCHHHHH CS
  Flagellin_C  5 deaitdldkvrselGavqnRlesaitnlkaqsenlkaaesrledvDpae 53
                 +e + ++++++++l a+q++l++ +++l +  e ++a+ +   +vD+  
   EPX74418.1 18 KERVAEMEAEAAKLRAMQEQLDNESEALRNDRESIDAQSVYVGNVDYSV 66
                 56788999**************************************975 PP

>> GAS  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   3.2   3.8e-05     0.045      50     127 ..       8      54 ..       2      72 .. 0.61

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 3.8e-05
         GAS  50 seisqenkrlkepLkkaeeeveeLrkqlknyekdkqslknlkarlkelekelkdlkwehevleqrfekvekerdelyk 127
                 +                                + ++l+++k+r+ e+e e  +l+  +e+l  + e++ ++r+ + +
  EPX74418.1   8 DT-------------------------------QEKELREMKERVAEMEAEAAKLRAMQEQLDNESEALRNDRESIDA 54 
                 33...............................445566666666666666666666666666666666666655544 PP

>> PEARLI-4  Arabidopsis phospholipase-like protein (PEARLI 4)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   2.2   5.8e-05     0.069     214     259 ..       5      50 ..       1      59 [. 0.81

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 5.8e-05
    PEARLI-4 214 kelaekEKeikevrekvtemaaklgelemkrarlekrlaflssKve 259
                 + +  +EKe++e++e+v em+a+ ++l + + +l+++ + l+   e
  EPX74418.1   5 DAMDTQEKELREMKERVAEMEAEAAKLRAMQEQLDNESEALRNDRE 50 
                 557789***********************99999988777766555 PP

>> DUF3450  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   3.6   7.4e-05     0.088      44      93 ..       5      54 ..       2      68 .. 0.61

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 7.4e-05
     DUF3450 44 dekqellaeyralkeeleslevyneqlerlvasqeqeiasleeqieeiee 93
                d  ++ ++e+r++ke+++++e++ ++l+++++++++e + l+++ e+i++
  EPX74418.1  5 DAMDTQEKELREMKERVAEMEAEAAKLRAMQEQLDNESEALRNDRESIDA 54
                44455556666666666666666666666666666666666666666654 PP

>> DUF2514  Protein of unknown function (DUF2514)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   3.4   0.00014      0.16      54     108 ..       2      56 ..       1      64 [. 0.88

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00014
     DUF2514  54 eeqrrkaaaekavkdaqekaaaAradavgaaaaadrLrqeaakLaaaksavaads 108
                  eq+   ++ek  ++ +e+ a   a+a++++a +++L +e ++L   ++ + a+s
  EPX74418.1   2 SEQDAMDTQEKELREMKERVAEMEAEAAKLRAMQEQLDNESEALRNDRESIDAQS 56 
                 699999**************************************77777666655 PP

>> OmpH  Outer membrane protein (OmpH-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   4.5   0.00016      0.19      15      63 ..       5      50 ..       1      73 [. 0.73

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00016
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS.-HHHHH CS
        OmpH 15 pegkaaqeqlekkfkklqaeleakekelqklqeelqkkakklekeekeq 63
                +++ + +++l ++ k++ ae+ea++++l+++qe+l++++++l ++++ +
  EPX74418.1  5 DAMDTQEKEL-REMKERVAEMEAEAAKLRAMQEQLDNESEAL-RNDR-E 50
                4555666666.6778999*****************8766664.3333.3 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   4.0   0.00017      0.21     195     242 ..       8      55 ..       2      64 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00017
        Spc7 195 sidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeq 242
                 + +++eL+e++e++ae +ae ++++++ ++l ++ e+l+++ e++++q
  EPX74418.1   8 DTQEKELREMKERVAEMEAEAAKLRAMQEQLDNESEALRNDRESIDAQ 55 
                 345778888888888888888888888888888888888877777665 PP

>> COG6  Conserved oligomeric complex COG6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   2.2   0.00029      0.35      44     100 ..       5      61 ..       2      73 .. 0.86

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00029
        COG6  44 eqLkriesdveklnelcdemkkklssakeetsdlleeaeeLkeekkklelkqkllka 100
                 +++++ e+++ +++e + em+ +  + ++ +++l +e e+L++++++++ +   + +
  EPX74418.1   5 DAMDTQEKELREMKERVAEMEAEAAKLRAMQEQLDNESEALRNDRESIDAQSVYVGN 61 
                 6789999*****************************************999877765 PP

>> DUF724  Protein of unknown function (DUF724)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   5.4   0.00032      0.38     121     173 ..       3      55 ..       1      61 [. 0.87

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00032
      DUF724 121 eesekrkleeeidelekkilelerqlallkekkeaadkeiarlkseaekleee 173
                 e++++   e+e++e++++++e+e ++a l++++e+ d+e  +l+ + e+++ +
  EPX74418.1   3 EQDAMDTQEKELREMKERVAEMEAEAAKLRAMQEQLDNESEALRNDRESIDAQ 55 
                 4555667799*********************************9999999876 PP

>> V_ATPase_I  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   1.0   0.00033      0.39      67     119 ..       3      55 ..       1      80 [. 0.75

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00033
  V_ATPase_I  67 eekeldeleeelekleeelkelnenleklkkelnelvelkavlekakefleee 119
                 e++ +d+ e+el++++e++ e+++++ kl++ +++l ++++ l++ +e ++++
  EPX74418.1   3 EQDAMDTQEKELREMKERVAEMEAEAAKLRAMQEQLDNESEALRNDRESIDAQ 55 
                 56778888888888888888888888888888888888888888887777655 PP

>> Spc24  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   3.0   0.00077      0.92      10      48 ..      11      49 ..       3      67 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00077
       Spc24 10 akelsdleselesleselaelkeeleeleeesee..keser 48
                 kel+++++ + ++e+e a+l+++ e+l++ese+  +  +r
  EPX74418.1 11 EKELREMKERVAEMEAEAAKLRAMQEQLDNESEAlrN--DR 49
                5788888888888888888888888888888888432..22 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0  10.7    0.0032       3.9      49      94 ..       7      52 ..       1      57 [. 0.47

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0032
      APG6_N 49 leeleeeleklekeeeelleeLkelekereeleaelaaleeeleal 94
                ++  e+el+++++  +e+++e ++l + +e+l++e +al++  e +
  EPX74418.1  7 MDTQEKELREMKERVAEMEAEAAKLRAMQEQLDNESEALRNDRESI 52
                3444455555555555555555555555555555555554444444 PP

>> EMP24_GP25L  emp24/gp25L/p24 family/GOLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   5.1    0.0071       8.5     110     151 ..       4      45 ..       1      48 [. 0.91

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0071
  EMP24_GP25L 110 kekletleselkkleekldsikreqkylrereerlrdtnest 151
                  ++ ++t e+el++++e++ +++ e   lr+++e+l + +e +
   EPX74418.1   4 QDAMDTQEKELREMKERVAEMEAEAAKLRAMQEQLDNESEAL 45 
                  6789999*****************************999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1953  (0.10893); expected 358.6 (0.02)
Passed bias filter:                     1424  (0.0794244); expected 358.6 (0.02)
Passed Vit filter:                       265  (0.0147805); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.53u 0.33s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 1102.91
//
Query:       EPX74419.1  [L=755]
Description: HECT-type ubiquitin-protein ligase Pub3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-97  326.8   0.0      2e-97  326.4   0.0    1.2  1  HECT      HECT-domain (ubiquitin-transferase)
      1e-34  118.3  15.0    8.8e-12   44.9   1.8    3.7  3  WW        WW domain
    2.1e-17   63.3   0.0    5.1e-17   62.0   0.0    1.7  1  C2        C2 domain


Domain annotation for each model (and alignments):
>> HECT  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  326.4   0.0  3.4e-101     2e-97       2     306 ..     452     754 ..     451     755 .] 0.97

  Alignments for each domain:
  == domain 1  score: 326.4 bits;  conditional E-value: 3.4e-101
                 HHHHHHT-GGGSSEEESSTTSSSEEE-TTHHHHS.....HHHHHHHHHHHHHTT--BSS-B-HHHHHHHTT-.---TCHHHHH-HHHHHHHHHHH..HS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT   2 llskelldpklglfeeesedsgtlypkpssseee.llklfeflGkvlGkaiyeeilldlpfsraflkfllgeekitledleeidpelakslkellsles 99 
                 lls++++dp + lfe++++d++tl+++p s  +  +l++f+f+G+v+G+ai++++ ld  f   ++k+ll+ +k+tl+d+e+id ++++slk++l  e+
  EPX74419.1 452 LLSHKMFDPIYCLFEYSAVDNYTLQINPHSGINPeHLNYFRFIGRVIGLAIFHRRFLDAFFVVSLYKKLLQ-KKVTLADMESIDADFYRSLKWVL--EN 547
                 89**************************98776698899********************************.6**********************..66 PP

                 -GGG...GT-BSEEEEE.TTEEEEEESSTTGGGSB--TTTHHHHHHHHHHHHHTGGGHHHHHHHHHHHHTTS-HHHHTTS-HHHHHHHHBCSSS.--HH CS
                 xxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT 100 nteevedlaLtFtipen.agasatieLipnGanipVtnenkkeYiklyvnyllkksvekqleaflkGfsevipskalklfdaeelellisGedelidve 197
                 + +    l+LtF+ +e+ +g+ +tieL+pnG+ni+Vt+enkkeY++l++++++ ++ve+q++af  Gf e++p +++++fd++elelli G ++ +d+ 
  EPX74419.1 548 DIT--GILDLTFSAEEDhFGEVRTIELKPNGENIEVTEENKKEYVDLVTEWRISRRVENQFNAFYAGFVELVPPDLVSVFDERELELLIGGISD-VDIG 643
                 775..45********99****************************************************************************7.**** PP

                 HHHHTEEEETT--TTSHHHHHHHHHHHHS-HHHHHHHHHHHHSSSS--TTCGGG-.....B--EEEEE-S..-TTS--EEEGGGTEEEE---SSHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT 198 dlrrnteykggynaesetiewlweilkefspeekrlfLqFvTgssrlPlgGfael.....hpkftierkskedetrLPtahTCfnlLklpdYsskeilk 291
                 d++++tey+  y++++++++w+wei++++++ee++ +LqFvTg+sr+P++Gf+ l      +kftie+ +  + ++LP ahTCfn+L+lp+Y++k++l+
  EPX74419.1 644 DWKSHTEYRT-YSSSDQVVKWFWEIISNWKNEERSMLLQFVTGTSRIPVNGFRDLqgsdgPRKFTIEKAG--SPDQLPVAHTCFNRLDLPEYPTKAKLE 739
                 ********86.************************************************99*******88..99************************* PP

                 HHHHHHHHHHH--XX CS
                 xxxxxxxxxxxxxxx RF
        HECT 292 ekLltAieetegFel 306
                  kL +Aie+t gF+ 
  EPX74419.1 740 GKLSLAIENTVGFGN 754
                 *************86 PP

>> WW  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.0   1.5   4.9e-14   2.9e-10       1      31 []     209     238 ..     209     238 .. 0.98
   2 !   44.9   1.8   1.5e-15   8.8e-12       1      31 []     276     305 ..     276     305 .. 0.99
   3 !   40.7   0.1   2.9e-14   1.8e-10       1      31 []     335     364 ..     335     364 .. 0.99

  Alignments for each domain:
  == domain 1  score: 40.0 bits;  conditional E-value: 4.9e-14
                 X-TTEEEEE-TTTT-EEEEETTT--EESS-- CS
          WW   1 LPpGWeeqwdpdsGrvYYyNheTgetqWekP 31 
                 LPpGWe + d+  Gr+YY++h++++t+W +P
  EPX74419.1 209 LPPGWERRADSL-GRTYYVDHNNRTTTWNRP 238
                 8***********.*****************9 PP

  == domain 2  score: 44.9 bits;  conditional E-value: 1.5e-15
                 X-TTEEEEE-TTTT-EEEEETTT--EESS-- CS
          WW   1 LPpGWeeqwdpdsGrvYYyNheTgetqWekP 31 
                 LP+GWe++++ + Gr+Y+++h+T++t+W++P
  EPX74419.1 276 LPAGWEQRFTNT-GRPYFVDHNTRTTTWVDP 305
                 8***********.****************99 PP

  == domain 3  score: 40.7 bits;  conditional E-value: 2.9e-14
                 X-TTEEEEE-TTTT-EEEEETTT--EESS-- CS
          WW   1 LPpGWeeqwdpdsGrvYYyNheTgetqWekP 31 
                 LP+GWe++ + +  rvY+++h+T++t+W++P
  EPX74419.1 335 LPSGWEMRLTNS-ARVYFVDHNTKTTTWDDP 364
                 8***********.*****************9 PP

>> C2  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.0   0.0   8.6e-21   5.1e-17       2      92 ..       7     100 ..       6     111 .. 0.88

  Alignments for each domain:
  == domain 1  score: 62.0 bits;  conditional E-value: 8.6e-21
                 EEEEEEEEEESSSSSSTTSSCEEEEEEEEECEEEEEE-SCSSSSSSEEEEEEEEEESCHTTSEEEEEEEEECSSSTEE..EEEEEEEEGHH...HH CS
          C2   2 klevtvieAknLpnkdkkgssdpyvkvsldgkqkakTrviknslnPvWnekftfevaeleeakLeveVfdndrlskdd..fiGkveiplst...ll 92 
                 +++++++ A++L+++d ++++dp++ +++dg+q++ Trv+k+s+nP Wne f + v++  ++ + +++fd+++++k+d  f+G v++++++   l 
  EPX74419.1   7 RIRFSIMAAEGLAKRDLFRQPDPFAILTVDGEQTHTTRVVKKSTNPYWNEGFDIVVKP--SSGVLIRLFDQKKFKKKDqgFLGLVSFQVQDisnLR 100
                 67899*************************************************9999..999**********966656***********944333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (755 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1020  (0.0568911); expected 358.6 (0.02)
Passed bias filter:                      510  (0.0284455); expected 358.6 (0.02)
Passed Vit filter:                        66  (0.00368119); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.74u 0.31s 00:00:01.05 Elapsed: 00:00:00.47
# Mc/sec: 4797.14
//
Query:       EPX74420.1  [L=775]
Description: AAA family ATPase Rix7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.9e-91  302.8   0.0    3.2e-46  157.0   0.0    2.5  2  AAA              ATPase family associated with various cellul
    5.4e-21   74.1   0.8    9.4e-10   38.1   0.0    2.6  2  AAA_lid_3        AAA+ lid domain
    8.5e-15   54.9   0.0      7e-07   29.1   0.0    3.3  3  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    5.7e-14   52.8   0.5     0.0004   20.8   0.0    4.4  3  AAA_16           AAA ATPase domain
    3.2e-12   46.6   0.1    0.00013   22.0   0.0    3.6  2  AAA_5            AAA domain (dynein-related subfamily)
    1.7e-11   44.8   0.0    7.4e-07   29.8   0.0    3.1  2  AAA_18           AAA domain
    2.3e-11   44.1   0.0    5.8e-05   23.3   0.0    3.1  2  AAA_33           AAA domain
      4e-11   43.3   0.2     0.0041   17.4   0.0    4.9  4  AAA_22           AAA domain
    4.3e-10   40.0   0.0     0.0015   18.7   0.0    3.0  2  AAA_2            AAA domain (Cdc48 subfamily)
      2e-09   37.8   0.0     0.0023   18.3   0.0    3.1  2  RNA_helicase     RNA helicase
    5.9e-09   35.6   0.0     0.0002   20.7   0.0    2.4  2  TIP49            TIP49 P-loop domain
    3.9e-08   33.4   0.0      0.011   15.8   0.0    2.6  2  AAA_14           AAA domain
    9.7e-08   31.9   0.0     0.0016   18.3   0.0    2.5  2  AAA_3            ATPase family associated with various cellul
    1.4e-07   31.1   0.5     0.0073   15.7   0.1    2.5  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
    1.7e-07   31.7   0.0      0.003   17.8   0.0    2.8  2  AAA_28           AAA domain
    2.9e-07   30.4   0.0      0.016   15.0   0.0    2.4  2  IstB_IS21        IstB-like ATP binding protein
    3.1e-07   30.3   0.6    0.00062   19.7   0.1    3.5  3  Vps4_C           Vps4 C terminal oligomerisation domain
    7.1e-07   29.3   0.1      0.011   15.6   0.0    3.3  3  NACHT            NACHT domain
    3.4e-06   26.8   2.8      0.097   12.2   0.1    4.4  4  AAA_25           AAA domain
    3.5e-06   27.3   0.0     0.0032   17.6   0.0    2.6  2  Cytidylate_kin2  Cytidylate kinase-like family
    4.1e-06   26.8   0.0       0.03   14.3   0.0    2.4  2  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
    6.8e-06   25.5   0.0       0.12   11.6   0.0    2.6  2  Zeta_toxin       Zeta toxin
    6.8e-06   26.5   1.3       0.03   14.7   0.0    3.7  3  AAA_17           AAA domain
      8e-06   26.4   0.0       0.33   11.4   0.0    3.3  2  ABC_tran         ABC transporter
    1.6e-05   24.9   0.0      0.065   13.1   0.0    2.6  2  Rad17            Rad17 P-loop domain
    5.3e-05   22.8   0.0       0.22   11.0   0.0    2.7  2  AAA_7            P-loop containing dynein motor region
    6.1e-05   22.5   0.2       0.25   10.7   0.0    3.2  3  ATPase           KaiC
    6.3e-05   22.7   0.0       0.29   10.8   0.0    3.4  3  Sigma54_activat  Sigma-54 interaction domain
    0.00012   21.3   0.0       0.82    8.8   0.0    3.2  3  NB-ARC           NB-ARC domain
    0.00016   20.9   0.0      0.028   13.6   0.0    2.8  2  DUF815           Protein of unknown function (DUF815)
    0.00021   21.2   4.8        1.1    8.9   0.0    3.4  3  AAA_11           AAA domain
    0.00029   20.7   0.7        1.2    8.9   0.0    3.0  3  Viral_helicase1  Viral (Superfamily 1) RNA helicase
    0.00085   19.5   0.0        2.1    8.5   0.0    2.6  2  Sigma54_activ_2  Sigma-54 interaction domain
    0.00095   18.9   0.0        1.1    9.0   0.0    2.6  2  AAA_24           AAA domain
    0.00095   18.1   0.0       0.21   10.5   0.0    2.9  2  AFG1_ATPase      AFG1-like ATPase
     0.0011   18.1   0.1        1.4    8.0   0.0    2.2  2  Parvo_NS1        Parvovirus non-structural protein NS1
     0.0014   18.1   0.3        1.5    8.2   0.0    2.5  2  PhoH             PhoH-like protein
     0.0016   18.6   1.8       0.97    9.5   0.0    3.6  2  SKI              Shikimate kinase
      0.002   18.5   4.0       0.46   10.7   0.0    3.8  4  Hydin_ADK        Hydin Adenylate kinase-like domain
      0.002   18.1   0.0        1.9    8.4   0.0    2.9  2  ATPase_2         ATPase domain predominantly from Archaea
     0.0027   17.1   0.0        4.5    6.6   0.0    3.5  3  TniB             Bacterial TniB protein
  ------ inclusion threshold ------
      0.012   15.1   0.0        3.9    6.9   0.0    2.9  2  SRPRB            Signal recognition particle receptor beta su
      0.013   15.4   0.0       0.36   10.7   0.0    2.4  2  CPT              Chloramphenicol phosphotransferase-like prot
      0.019   14.7   0.1        2.3    7.9   0.0    2.7  2  Cytidylate_kin   Cytidylate kinase
      0.026   14.5   0.0        7.3    6.5   0.0    2.8  2  NTPase_1         NTPase
      0.029   14.7   1.1         10    6.5   0.1    3.1  2  AAA_19           AAA domain
      0.042   13.6   0.0         11    5.7   0.0    2.4  2  PduV-EutP        Ethanolamine utilisation - propanediol utili
      0.059   13.2   0.0          4    7.2   0.0    2.7  2  Bac_DnaA         Bacterial dnaA  protein
      0.089   12.5   1.5         14    5.3   0.0    4.3  5  Guanylate_kin    Guanylate kinase
       0.09   12.0   1.3        3.2    6.9   0.0    2.6  2  DUF2075          Uncharacterized conserved protein (DUF2075)
      0.099   12.3   0.3         12    5.6   0.0    2.6  2  AAA_30           AAA domain
       0.13   12.4   0.1         18    5.4   0.0    2.8  2  ADK              Adenylate kinase
       0.13   11.6   0.1         14    5.0   0.0    2.4  2  IPT              Isopentenyl transferase


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.4   0.0   1.5e-44   5.2e-42       1     129 [.     206     337 ..     206     340 .. 0.97
   2 !  157.0   0.0   9.3e-49   3.2e-46       1     130 [.     526     654 ..     526     656 .. 0.97

  Alignments for each domain:
  == domain 1  score: 143.4 bits;  conditional E-value: 1.5e-44
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTS CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkk 99 
                 vll+GppG+GKT+la+a+a elgv+fl+is+++++s + gesekk+r++f+eak  a p+ +fiDEida++++r+++++e e+r+v+q+lt ld+++ +
  EPX74420.1 206 VLLHGPPGCGKTMLANALAAELGVPFLSISAPSIVSGMSGESEKKVRDVFEEAKLLA-PCLMFIDEIDAVTPKRESAQREMERRIVAQFLTCLDELSFE 303
                 79******************************************************9.*************************************9988 PP

                 ...SSTEEEEEEESSGGGSTHHHHS.TTSSEEEE CS
         AAA 100 ...eskvivigatnrpdkldpallr.gRfdrkie 129
                     ++v+vigatnrpd+ld+al+r gRfdr+i 
  EPX74420.1 304 ntgGKPVLVIGATNRPDSLDSALRRaGRFDREIC 337
                 888677*************************996 PP

  == domain 2  score: 157.0 bits;  conditional E-value: 9.3e-49
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTS CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkk 99 
                 vll+GppG+GKTllakava+e++++f++i g+ell+kyvgese+ +r++f++a++++ p+++f+DE+da++++r++s se ++rvvn+Llteldg++++
  EPX74420.1 526 VLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFARARASS-PCVIFFDELDAMVPKRDDSLSEASSRVVNTLLTELDGLNDR 623
                 79******************************************************9.****************************************7 PP

                 SSTEEEEEEESSGGGSTHHHHS.TTSSEEEET CS
         AAA 100 eskvivigatnrpdkldpallr.gRfdrkiei 130
                  s v vi+atnrpd +d a+lr gR+d+ + +
  EPX74420.1 624 AS-VYVIAATNRPDIIDAAMLRpGRLDKTLLV 654
                 55.************************98876 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.1   0.0   2.8e-12   9.4e-10       1      39 [.     362     400 ..     362     408 .. 0.91
   2 !   33.9   0.1   5.9e-11     2e-08       1      33 [.     678     712 ..     678     742 .. 0.73

  Alignments for each domain:
  == domain 1  score: 38.1 bits;  conditional E-value: 2.8e-12
   AAA_lid_3   1 dvdlkeLAerTeGySGADlaalcreAallAlrrgikeit 39 
                 ++d+ +LA++T+Gy+GADl+al  +A+  A++r + e+t
  EPX74420.1 362 NFDFRQLAKQTPGYVGADLKALTSAAGVIAIKRIFNELT 400
                 68*******************************998876 PP

  == domain 2  score: 33.9 bits;  conditional E-value: 5.9e-11
   AAA_lid_3   1 dvdlkeLAe..rTeGySGADlaalcreAallAlrr 33 
                 d++l+ + +  r+  +SGADlaal+reAa  Alr 
  EPX74420.1 678 DINLELIGRdeRCSSFSGADLAALVREAAVTALRS 712
                 67777788888**********************98 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1   0.0   2.1e-09     7e-07      36     150 ..     206     327 ..     197     335 .. 0.70
   2 !   21.0   0.0   6.5e-07   0.00022      36      70 ..     526     560 ..     495     609 .. 0.79
   3 ?   -0.4   0.0       2.5   8.3e+02      16      52 ..     621     656 ..     613     679 .. 0.75

  Alignments for each domain:
  == domain 1  score: 29.1 bits;  conditional E-value: 2.1e-09
      RuvB_N  36 vllyGpPGlGkttlakiiakelgvklkitsgPvl......ekagdlaallt..nleekdvlfideihrlsraveevlysamedfrldivigkGpsarsi 126
                 vll+GpPG Gkt la+ +a+elgv + + s+P +      e ++ +  ++   +l +  ++fidei  ++++ e      me   +   +         
  EPX74420.1 206 VLLHGPPGCGKTMLANALAAELGVPFLSISAPSIvsgmsgESEKKVRDVFEeaKLLAPCLMFIDEIDAVTPKRES-AQREMERRIVAQFLTCLDELSFE 303
                 9*******************************9844444434445555554114556678999999999887654.45566666666666555555555 PP

      RuvB_N 127 kldlpkftlvgattragllssPlr 150
                 +   ++  ++gat r   l s lr
  EPX74420.1 304 NTGGKPVLVIGATNRPDSLDSALR 327
                 566666666666666666666666 PP

  == domain 2  score: 21.0 bits;  conditional E-value: 6.5e-07
      RuvB_N  36 vllyGpPGlGkttlakiiakelgvklkitsgPvle 70 
                 vll GpPG Gkt lak +a+e ++++ +  gP l 
  EPX74420.1 526 VLLWGPPGCGKTLLAKAVANESKANFISIRGPELL 560
                 9***************************9999874 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 2.5
      RuvB_N  16 keklkifieaakkreealdhvllyGpPGlGkttlaki 52 
                 +++ ++++ aa +r + +d  +l  p  l kt l  +
  EPX74420.1 621 NDRASVYVIAATNRPDIIDAAMLR-PGRLDKTLLVDL 656
                 567789999999999999988875.556888877655 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.0   1.2e-06    0.0004      24      49 ..     203     228 ..     193     313 .. 0.83
   2 !   20.3   0.0   1.7e-06   0.00059      15      59 ..     514     555 ..     513     570 .. 0.82
   3 ?    6.1   0.0     0.038        13     122     161 ..     570     616 ..     565     629 .. 0.73

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 1.2e-06
      AAA_16  24 pelvllsGesGvGKsslvrellrale 49 
                 p+ vll+G++G+GK+ l+++l+ +l 
  EPX74420.1 203 PRGVLLHGPPGCGKTMLANALAAELG 228
                 599******************98775 PP

  == domain 2  score: 20.3 bits;  conditional E-value: 1.7e-06
      AAA_16  15 alervrsgrpelvllsGesGvGKsslvrellralekdggiflrgk 59 
                 ++++v    p+ vll G++G+GK+ l+++++++ +++   f++ +
  EPX74420.1 514 LYKSVGITAPCGVLLWGPPGCGKTLLAKAVANESKAN---FISIR 555
                 6778888899*********************987777...54444 PP

  == domain 3  score: 6.1 bits;  conditional E-value: 0.038
      AAA_16 122 llkrllallsrderplvlvlDdlq........wadeaslqllaaLlrl 161
                 ++++ +a+++  ++p v+++D+l+         + eas  +  +Ll++
  EPX74420.1 570 AVRQVFARARA-SSPCVIFFDELDamvpkrddSLSEASSRVVNTLLTE 616
                 56677788898.889*********888877775555666666555555 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0   3.8e-07   0.00013       1     136 [.     205     328 ..     205     329 .. 0.65
   2 !   20.0   0.0   1.6e-06   0.00054       1     124 [.     525     636 ..     525     645 .. 0.72

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 3.8e-07
                 EEEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------..G-SEEEEESGGG--HHHHHHHHHHHHSSEEE.. CS
       AAA_5   1 dvlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar..egeilvlDEveraesevlnsLlslleerrllle 97 
                 +vlL GppG+gK++la  laa l+ +++ +  ++      ++ +++   g+ + +   + ++a+   ++++++DE++ + ++  ++   +  +   ++ 
  EPX74420.1 205 GVLLHGPPGCGKTMLANALAAELGVPFLSISAPS------IVSGMS---GESEKKVRDVFEEAKllAPCLMFIDEIDAVTPKRESAQREMERRIVAQFL 294
                 59*************************9988777......666666...33333334444455555999999999997766654444333222233333 PP

                 -SSSEEE---..........-EEEEEESS--.-TT-TTHHHHT CS
       AAA_5  98 eggelvkaknddller....frviatanpldrslnelspalrs 136
                     + +++n     +    + vi+++n++d    +l++alr+
  EPX74420.1 295 TCLDELSFEN-----TggkpVLVIGATNRPD----SLDSALRR 328
                 4444444444.....1234488888888888....77777775 PP

  == domain 2  score: 20.0 bits;  conditional E-value: 1.6e-06
                 EEEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------.G-SEEEEESGGG--HHHHHHHHHHHHSSEEE..- CS
       AAA_5   1 dvlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar.egeilvlDEveraesevlnsLlslleerrlllee 98 
                 +vlL GppG+gK+ la+ +a   ++++  + +++      l+ ++   ++ ++ v +++ ra   +++++++DE++ + ++  +sL        + ++ 
  EPX74420.1 525 GVLLWGPPGCGKTLLAKAVANESKANFISIRGPE------LLNKYV--GESERAVRQVFARARAsSPCVIFFDELDAMVPKRDDSLSEA---SSRVVNT 612
                 59********************999999999987......666666..445555677777654469**********7777777777444...4444445 PP

                 SSSEEE---......-EEEEEESS-- CS
       AAA_5  99 ggelvkaknddllerfrviatanpld 124
                 + ++ +  nd +++ ++via++n++d
  EPX74420.1 613 LLTELDGLND-RAS-VYVIAATNRPD 636
                 5555555443.233.99999999998 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.8   0.0   2.2e-09   7.4e-07       1     112 [.     206     351 ..     206     369 .. 0.71
   2 !   11.8   0.0   0.00081      0.28       1      25 [.     526     557 ..     526     634 .. 0.74

  Alignments for each domain:
  == domain 1  score: 29.8 bits;  conditional E-value: 2.2e-09
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf.....................gvnlrdvakenglllevdpe.......aldeskrldedkldklldaleenssal 71 
                 +ll G+pG+GKt la++L+ +lg+                     ++ + + ak   ++l++ +e         + ++++++  +++ l++l+e s  +
  EPX74420.1 206 VLLHGPPGCGKTMLANALAAELGVpflsisapsivsgmsgesekkVRDVFEEAKLLAPCLMFIDEidavtpkRESAQREMERRIVAQFLTCLDELSFEN 304
                 7899*****************99999****************555555555555555555666669996665445556666666677777777765577 PP

      AAA_18  72 eegknlvi.......dghlaeleseaakdikk.....vvLtaspeelleRlek 112
                 + gk++++       d++ + l+ +      +     ++Lt+++ee +eR+ +
  EPX74420.1 305 TGGKPVLVigatnrpDSLDSALRRA------GrfdreICLTVPNEESRERILR 351
                 7788775523333334444444444......346666*************975 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 0.00081
      AAA_18   1 IlltGtpGvGKttlakeLskrl.gf......g 25 
                 +ll G+pG+GKt lak+++++  ++       
  EPX74420.1 526 VLLWGPPGCGKTLLAKAVANESkANfisirgP 557
                 7899**************77643223555551 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.0   1.7e-07   5.8e-05       2      47 ..     206     269 ..     206     375 .. 0.55
   2 !   17.4   0.0   1.1e-05    0.0039       2      43 ..     526     569 ..     526     656 .. 0.67

  Alignments for each domain:
  == domain 1  score: 23.3 bits;  conditional E-value: 1.7e-07
      AAA_33   2 vllvGlpGsGKstlaerllkklg..avllssdtlrrrlfgtdqqskt................d 47 
                 vll+G+pG+GK+ la  l+++lg  +  +s +++ + + g+ +++ +                d
  EPX74420.1 206 VLLHGPPGCGKTMLANALAAELGvpFLSISAPSIVSGMSGESEKKVRdvfeeakllapclmfiD 269
                 799********************98888999997777777544444433333333333333331 PP

  == domain 2  score: 17.4 bits;  conditional E-value: 1.1e-05
      AAA_33   2 vllvGlpGsGKstlaerllkklg..avllssdtlrrrlfgtdqq 43 
                 vll G+pG+GK+ la+ ++++ +  ++ ++ ++l+++++g+ ++
  EPX74420.1 526 VLLWGPPGCGKTLLAKAVANESKanFISIRGPELLNKYVGESER 569
                 6899***************9999888889999976666664332 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   1.2e-05    0.0041       8      48 ..     206     237 ..     201     258 .. 0.78
   2 ?    2.0   0.0      0.67   2.3e+02      88     131 ..     257     316 ..     244     322 .. 0.59
   3 ?   -1.5   0.0       8.1   2.8e+03      44      70 ..     337     363 ..     325     446 .. 0.77
   4 !   15.7   0.0   4.2e-05     0.014       9      38 ..     527     562 ..     523     629 .. 0.69

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 1.2e-05
      AAA_22   8 lvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlp 48 
                 ++++G++G+GKT+l++ l+ +l         +++++++ +p
  EPX74420.1 206 VLLHGPPGCGKTMLANALAAEL---------GVPFLSISAP 237
                 689*****************99.........5555555444 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.67
      AAA_22  88 arav..ielliiDEaqhlr....s......eealeeLrsllnl....srkgvqliLvGtp 131
                 +++   + l+ iDE++ ++    s       +++ ++ ++l+     ++ g +++++G +
  EPX74420.1 257 EAKLlaPCLMFIDEIDAVTpkreSaqremeRRIVAQFLTCLDElsfeNTGGKPVLVIGAT 316
                 4444567899********876541554444222222233333344444777777777765 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 8.1
      AAA_22  44 fvtlpsstsskdllrellralglelka 70 
                   t+p+++s++ +lr +++ l l+++ 
  EPX74420.1 337 CLTVPNEESRERILRTMAKGLRLSGNF 363
                 567777888888888888888777666 PP

  == domain 4  score: 15.7 bits;  conditional E-value: 4.2e-05
      AAA_22   9 vvtGesGtGKTtllrrlleqldeeakaee......e 38 
                 +++G++G+GKT+l++ ++++ ++     +      +
  EPX74420.1 527 LLWGPPGCGKTLLAKAVANESKANFISIRgpellnK 562
                 799****************98433222224444440 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   9.8e-06    0.0033       6     106 ..     206     300 ..     202     354 .. 0.74
   2 !   18.7   0.0   4.5e-06    0.0015       6     104 ..     526     618 ..     523     622 .. 0.75

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 9.8e-06
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG---..----THHHHHHHHHTTT-HHHHTTSEEEEETGGG----.---------HHHHHHHHH CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselle..eeevehlvsrligappgyvgaeegGivllDEidKihpk.essgadvSregVqrdLLq 101
                 +ll gp g+Gkt+la+ala  l v    ++  + a ++    + e+e+ v     +++           ++DEid ++pk es+++++ r  V + +L 
  EPX74420.1 206 VLLHGPPGCGKTMLANALAAELGV----PFLSISAPSIVSgmSGESEKKVRDVFEEAKLLA----PCLMFIDEIDAVTPKrESAQREMERRIVAQ-FLT 295
                 6889*******************9....777777766666333333344444444444443....3399***********999999998876665.555 PP

                 HHH-- CS
       AAA_2 102 ilegg 106
                  l++ 
  EPX74420.1 296 CLDEL 300
                 56655 PP

  == domain 2  score: 18.7 bits;  conditional E-value: 4.5e-06
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTS...EEEEETGGG----.---------HHHHHHHH CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG...ivllDEidKihpk.essgadvSregVqrdLL 100
                 +ll gp g+Gkt+laka+a+  ++    ++i +   ell      ++v + + a     +++      ++++DE+d   pk + s ++ S+  V++ LL
  EPX74420.1 526 VLLWGPPGCGKTLLAKAVANESKA----NFISIRGPELLN-----KYVGESERAVRQVFARARASspcVIFFDELDAMVPKrDDSLSEASS-RVVNTLL 614
                 5789****************9985....***********9.....55555444444433333333366************97666666666.4777777 PP

                 HHHH CS
       AAA_2 101 qile 104
                   l+
  EPX74420.1 615 TELD 618
                 6555 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0   6.8e-06    0.0023       1      38 [.     206     243 ..     206     286 .. 0.88
   2 !   16.2   0.0   3.1e-05      0.01       1     106 [.     526     633 ..     526     634 .. 0.68

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 6.8e-06
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkklklkkkdsvysrn 38 
                   ++l+Gp+g+GK++la+ La++l   + +++++s++s+ 
    EPX74420.1 206 VLLHGPPGCGKTMLANALAAELGVPFLSISAPSIVSGM 243
                   689*******************9888888888887754 PP

  == domain 2  score: 16.2 bits;  conditional E-value: 3.1e-05
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkkl......klkkkdsvys.rnpeddfwdgYtgqevvvidD.fgqvkdeenpsdlaelirlvsstpyplnmasl 89 
                   ++l+Gp+g+GK++lak +a++   ++      +l +k    s r++++ f     + ++v+++D + +++ + ++s  +   r+v++    ++ + l
    EPX74420.1 526 VLLWGPPGCGKTLLAKAVANESKANFisirgpELLNKYVGESeRAVRQVFARARASSPCVIFFDeLDAMVPKRDDSLSEASSRVVNTLL--TELDGL 620
                   679**************999999887888887444444444557777777777777777665541666665546666777777777644..444555 PP

  RNA_helicase  90 eekgtlftSkvvivtsN 106
                   ++     +S++vi+ +N
    EPX74420.1 621 NDR----ASVYVIAATN 633
                   555....5788888887 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0     6e-07    0.0002      51      92 ..     204     243 ..     197     271 .. 0.89
   2 !   12.4   0.0    0.0002     0.066      52     103 ..     525     575 ..     513     580 .. 0.82

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 6e-07
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  51 ravLlaGpsgtGktalaiaiskelgedvpfvalsgsevysle 92 
                 r+vLl Gp+g Gkt la a++ elg  vpf ++s+  + s  
  EPX74420.1 204 RGVLLHGPPGCGKTMLANALAAELG--VPFLSISAPSIVSGM 243
                 89***********************..********9998764 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 0.0002
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXX CS
       TIP49  52 avLlaGpsgtGktalaiaiskelgedvpfvalsgsevyslevkkte.vltqal 103
                 +vLl Gp+g Gkt la a+++e  ++  f+++ g e+    v  +e ++ q +
  EPX74420.1 525 GVLLWGPPGCGKTLLAKAVANE--SKANFISIRGPELLNKYVGESErAVRQVF 575
                 79******************99..5689********99998888773445555 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   3.2e-05     0.011       5      87 ..     206     285 ..     203     307 .. 0.70
   2 !   14.7   0.0   6.7e-05     0.023       6      76 ..     527     594 ..     525     637 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 3.2e-05
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpe.kllelilek.lkeekktylflDEiqevpewekalkslv 87 
                 +++ G+  +GKT+l++ l+ el      +l i+  +    ++ ++e k+ +++ e  l      ++f+DEi  v+  ++  ++ +
  EPX74420.1 206 VLLHGPPGCGKTMLANALAAELG---VPFLSISAPSIVSGMSGESEkKVRDVFEEAkL--LAPCLMFIDEIDAVTPKRESAQREM 285
                 7899***************9999...44555554444443333333256677777643..35799******99966555555555 PP

  == domain 2  score: 14.7 bits;  conditional E-value: 6.7e-05
      AAA_14   6 vitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelileklkeekktylflDEiqev 76 
                 ++ G+  +GKT l+k +++e+     +++ i   +  +k   ++e+  + ++++++++   ++f+DE   +
  EPX74420.1 527 LLWGPPGCGKTLLAKAVANESK---ANFISIRGPELLNKYVGESERAVRQVFARARASSPCVIFFDELDAM 594
                 688999************8888...8899888888877776666655555555545568999*****9765 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0   4.9e-06    0.0016       2      88 ..     206     287 ..     205     320 .. 0.85
   2 !   11.2   0.0   0.00072      0.24       2     111 ..     526     633 ..     525     653 .. 0.66

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 4.9e-06
       AAA_3   2 vllegvPGlaktllvkalakaldlefkriqftpdllPsdilGtevfeekekefefkkGpvfan.llladeinrappktqsalleamee 88 
                 vll+g PG +kt+l++ala  l++ f  i       Ps + G++  +ek+ +  f++  ++a  l++ dei+  +pk +sa  e me 
  EPX74420.1 206 VLLHGPPGCGKTMLANALAAELGVPFLSIS-----APSIVSGMSGESEKKVRDVFEEAKLLAPcLMFIDEIDAVTPKRESAQRE-MER 287
                 89*********************9998886.....589999999999999999999999999725679************9766.444 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00072
       AAA_3   2 vllegvPGlaktllvkalakaldlefkriqftpdllPsdilGtevfeekekefefkkGpvfanllladeinrappktqsalleameerqvtvegethkl 100
                 vll g PG +ktll+ka+a+  +++f  i+  p+ll   + G +   ++ +++  ++ +    +++ de++   pk + +l ea      t+  e   l
  EPX74420.1 526 VLLWGPPGCGKTLLAKAVANESKANFISIR-GPELLNKYV-GESE--RAVRQVFARARASSPCVIFFDELDAMVPKRDDSLSEASSRVVNTLLTELDGL 620
                 7999**********************9997.688887655.4432..2223333333333445778888888888888888888776666665555555 PP

       AAA_3 101 pep..flvlatqn 111
                 ++    +v+a+ n
  EPX74420.1 621 NDRasVYVIAATN 633
                 4321133444444 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.1   2.2e-05    0.0073      25      44 ..     206     225 ..     203     250 .. 0.91
   2 !   12.9   0.0   0.00016     0.054      25      42 ..     526     543 ..     515     547 .. 0.87

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 2.2e-05
  Mg_chelatase  25 lllvGppGsGKtmlakrlps 44 
                   +ll GppG+GKtmla++l++
    EPX74420.1 206 VLLHGPPGCGKTMLANALAA 225
                   79**************9976 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 0.00016
  Mg_chelatase  25 lllvGppGsGKtmlakrl 42 
                   +ll GppG+GKt+lak++
    EPX74420.1 526 VLLWGPPGCGKTLLAKAV 543
                   89*************987 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   8.9e-06     0.003       2      50 ..     206     256 ..     205     348 .. 0.81
   2 !   11.1   0.0     0.001      0.35       2      37 ..     526     566 ..     525     590 .. 0.74

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 8.9e-06
      AAA_28   2 ivitGgestGKTtlleaLaar.gypvvpEaareileeklakgedalpwv.e 50 
                 + + G++++GKT l++aLaa+ g+p +  +a  i++  + + e++ ++v e
  EPX74420.1 206 VLLHGPPGCGKTMLANALAAElGVPFLSISAPSIVSGMSGESEKKVRDVfE 256
                 6799***************988**999888888888877777777776633 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.001
      AAA_28   2 ivitGgestGKTtlleaLaar...gypvv..pEaareilee 37 
                 + + G++++GKT l++a a++   ++  +  pE   +++ e
  EPX74420.1 526 VLLWGPPGCGKTLLAKAVANEskaNFISIrgPELLNKYVGE 566
                 6789***************7654533333477776666655 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   4.6e-05     0.016      48      92 ..     204     245 ..     190     291 .. 0.66
   2 !   12.8   0.0   0.00022     0.074      48      73 ..     524     549 ..     504     582 .. 0.87

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 4.6e-05
   IstB_IS21  48 enivllGpsGvGKshlaialgveavraglsvlfvrvedLveelkr 92 
                  +++l Gp+G GK+ la al+ e    g+  l ++++ +v+ ++ 
  EPX74420.1 204 RGVLLHGPPGCGKTMLANALAAE---LGVPFLSISAPSIVSGMSG 245
                 6799****************865...4555555556666666654 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 0.00022
   IstB_IS21  48 enivllGpsGvGKshlaialgveavr 73 
                  +++l Gp+G GK+ la a++ e  +
  EPX74420.1 524 CGVLLWGPPGCGKTLLAKAVANESKA 549
                 5799***************9988655 PP

>> Vps4_C  Vps4 C terminal oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0       2.3   7.8e+02      10      44 ..     245     280 ..     241     284 .. 0.79
   2 ?    5.7   0.0     0.045        15      21      45 ..     451     475 ..     426     480 .. 0.81
   3 !   19.7   0.1   1.8e-06   0.00062      25      55 ..     731     762 ..     716     766 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 2.3
      Vps4_C  10 gaiemtwmd.ipsdkllePpvtlkDflkalkkarpt 44 
                 g  e++++d +++ kll+P + + D ++a+   r +
  EPX74420.1 245 GESEKKVRDvFEEAKLLAPCLMFIDEIDAVTPKRES 280
                 66788888856799********99999998777665 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.045
      Vps4_C  21 sdkllePpvtlkDflkalkkarptV 45 
                 +++l +  +  +Df++al+k++p+ 
  EPX74420.1 451 PEELEPLAIGPHDFVEALSKVQPSS 475
                 66777779999************96 PP

  == domain 3  score: 19.7 bits;  conditional E-value: 1.8e-06
      Vps4_C  25 leP.pvtlkDflkalkkarptVskeDLekhee 55 
                  +P  vt+ Df+ a k+ rp+Vs+ D +k+++
  EPX74420.1 731 NAPiRVTMADFDLAFKNIRPSVSDRDRQKYQR 762
                 56779*********************999975 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   3.3e-05     0.011       3      24 ..     206     227 ..     204     233 .. 0.89
   2 !    9.3   0.0    0.0029      0.97       3      24 ..     526     547 ..     525     553 .. 0.87
   3 ?   -0.8   0.0       3.7   1.3e+03      58     112 ..     560     617 ..     555     641 .. 0.69

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 3.3e-05
                 EEEEC-TTTCHHHHHHHHHHHH CS
       NACHT   3 vilqGeaGsGKTtLlqklalaw 24 
                 v+l+G++G+GKT+L+  la ++
  EPX74420.1 206 VLLHGPPGCGKTMLANALAAEL 227
                 89****************9887 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.0029
                 EEEEC-TTTCHHHHHHHHHHHH CS
       NACHT   3 vilqGeaGsGKTtLlqklalaw 24 
                 v+l G++G+GKT L++ +a + 
  EPX74420.1 526 VLLWGPPGCGKTLLAKAVANES 547
                 6889************999875 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 3.7
                 HCCCCTS--SSS-CCHHHHCCSCCCEEEEEE-STT-SS-TCH.............HHHH CS
       NACHT  58 lfsqlpepaapvsevwavllelperlLlilDglDelvtdlgq....kekqpvrtlLsel 112
                 l +   e++++v++ +  +++     ++ +D lD +v + +     +  + v+tlL+el
  EPX74420.1 560 LNKYVGESERAVRQ-VFARARASSPCVIFFDELDAMVPKRDDslseASSRVVNTLLTEL 617
                 55555666777777.44467777788899999999998877766555555555666554 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.1   0.00029     0.097      36      57 ..     206     227 ..     188     243 .. 0.87
   2 ?    0.9   0.0      0.83   2.8e+02     130     172 ..     251     293 ..     239     314 .. 0.71
   3 ?    7.0   0.0     0.012         4      36      52 ..     526     542 ..     510     546 .. 0.90
   4 ?    2.7   0.0      0.24        83     127     182 ..     568     627 ..     557     632 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00029
      AAA_25  36 allaGapgtGKttlaldlalav 57 
                 +ll G+pg+GKt+la  la+++
  EPX74420.1 206 VLLHGPPGCGKTMLANALAAEL 227
                 689*************999874 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.83
      AAA_25 130 vdaleaaieevegvrlvviDplsralggdensnsdv.galveal 172
                 v+++ ++++  + + l  iD ++++++  e +++++ +++v+++
  EPX74420.1 251 VRDVFEEAKLLA-PCLMFIDEIDAVTPKRESAQREMeRRIVAQF 293
                 455555666643.78999**********9999999665555554 PP

  == domain 3  score: 7.0 bits;  conditional E-value: 0.012
      AAA_25  36 allaGapgtGKttlald 52 
                 +ll+G+pg+GKt la  
  EPX74420.1 526 VLLWGPPGCGKTLLAKA 542
                 689**********9965 PP

  == domain 4  score: 2.7 bits;  conditional E-value: 0.24
      AAA_25 127 tadvdaleaaieevegvrlvviDplsralgg..densnsd.....vgalvealeriarrtgaa 182
                 +++v+++ a++++   + ++ +D l+++++   d  s s+     v+ l++ l+ + +r  + 
  EPX74420.1 568 ERAVRQVFARARA-SSPCVIFFDELDAMVPKrdD--SLSEassrvVNTLLTELDGLNDRASVY 627
                 5789999999999.78**************9642..333311332466666666666666555 PP

>> Cytidylate_kin2  Cytidylate kinase-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   9.4e-06    0.0032       8      62 ..     212     263 ..     207     300 .. 0.69
   2 ?    6.6   0.0     0.022       7.5       8      93 ..     532     614 ..     529     632 .. 0.81

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 9.4e-06
  Cytidylate_kin2   8 yGsgGetigeaLAekLglpfydreiieevakelglseeeveevdersrlssflsk 62 
                       G+g++ ++ aLA +Lg+pf++   +  v+  +g se++v+ v e+++   +l+ 
       EPX74420.1 212 PGCGKTMLANALAAELGVPFLSISAPSIVSGMSGESEKKVRDVFEEAK---LLAP 263
                      6***************************************66655333...2222 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.022
  Cytidylate_kin2   8 yGsgGetigeaLAekLglpfydreiieevakelglseeeveevdersrlssflskllaarvagdtldeklddelfeaqervirela 93 
                       G+g++ +++a+A++ + +f++ + +e + k  g se  v++v  r+r+ss    ++++    d +  k dd+l ea +rv+++l 
       EPX74420.1 532 PGCGKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFARARASSPCVIFFDE---LDAMVPKRDDSLSEASSRVVNTLL 614
                      59*********************999999999999999997777767766666555555...344577888888888888888876 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   8.8e-05      0.03      21      52 ..     201     238 ..     175     241 .. 0.79
   2 !    9.8   0.0    0.0022      0.73      21      59 ..     525     563 ..     500     574 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 8.8e-05
                 E....EEEEESTTSSHHHHHHHHHHHTT--..----TT CS
        TsaE  21 v....ilLeGdLGaGKTtlvrglakalgve..evkSPT 52 
                      +lL+G+ G+GKT+l+ +la++lgv   +++ P+
  EPX74420.1 201 QpprgVLLHGPPGCGKTMLANALAAELGVPflSISAPS 238
                 044449***********************888888886 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.0022
                 EEEEEESTTSSHHHHHHHHHHHTT--..----TTTTSEEEE CS
        TsaE  21 vilLeGdLGaGKTtlvrglakalgve..evkSPTFtlveeY 59 
                  +lL G+ G+GKT l++++a++ + +  +++ P   l+++Y
  EPX74420.1 525 GVLLWGPPGCGKTLLAKAVANESKANfiSIRGP--ELLNKY 563
                 399******************998887777777..566666 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   0.0   0.00059       0.2      14      40 ..     201     227 ..     193     236 .. 0.85
   2 !   11.6   0.0   0.00036      0.12      15      50 ..     522     555 ..     512     564 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00059
  Zeta_toxin  14 erPklillgGqpGAGKselaellkdel 40 
                 + P  +ll G pG+GK+ la++l++el
  EPX74420.1 201 QPPRGVLLHGPPGCGKTMLANALAAEL 227
                 568889******************998 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 0.00036
  Zeta_toxin  15 rPklillgGqpGAGKselaellkdelerqgnvvrld 50 
                  P  +ll G pG+GK+ la+++++e   + n++ + 
  EPX74420.1 522 APCGVLLWGPPGCGKTLLAKAVANES--KANFISIR 555
                 68889********************8..89998886 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   8.9e-05      0.03       2      27 ..     210     235 ..     209     262 .. 0.90
   2 ?   -0.4   0.0       4.2   1.4e+03      98     122 ..     328     352 ..     267     358 .. 0.78
   3 ?    7.9   0.0     0.011       3.8       2      25 ..     530     553 ..     529     574 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 8.9e-05
                 E-TTSSHHHHHHHHHHHHTEEEEEHH CS
      AAA_17   2 GgPGsGKgtqceklvekygfthlsaG 27 
                 G+PG+GK+ +++ l+ ++g+++ls +
  EPX74420.1 210 GPPGCGKTMLANALAAELGVPFLSIS 235
                 9*********************9975 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 4.2
                 HHH..SEEEEEE--HHHHHHHHHHH CS
      AAA_17  98 eelkpdaiilleadpeeilerrlkd 122
                 +    d  i+l +++ee +er l+ 
  EPX74420.1 328 RAGRFDREICLTVPNEESRERILRT 352
                 45556778999******99999975 PP

  == domain 3  score: 7.9 bits;  conditional E-value: 0.011
                 E-TTSSHHHHHHHHHHHHTEEEEE CS
      AAA_17   2 GgPGsGKgtqceklvekygfthls 25 
                 G+PG+GK+ +++ ++ + +  ++s
  EPX74420.1 530 GPPGCGKTLLAKAVANESKANFIS 553
                 9**********9999887766666 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.0   0.00099      0.33      10      35 ..     202     227 ..     197     351 .. 0.83
   2 !   11.0   0.0    0.0013      0.44      14      51 ..     526     561 ..     517     625 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00099
                 TTSEEEEEESTTSSHHHHHHHHTTSS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  10 egekvaivGenGaGKStLlkllagll 35 
                 + + v + G+ G+GK+ L+++la +l
  EPX74420.1 202 PPRGVLLHGPPGCGKTMLANALAAEL 227
                 5566889***************9886 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.0013
                 EEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGG CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  14 vaivGenGaGKStLlkllagllkpteGeilldgkdlke 51 
                 v + G+ G+GK+ L+k++a+++k     i ++g +l +
  EPX74420.1 526 VLLWGPPGCGKTLLAKAVANESKA--NFISIRGPELLN 561
                 6799***************99874..445555555555 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.0   0.00019     0.065      46      82 ..     204     240 ..     196     278 .. 0.78
   2 !    8.8   0.0     0.004       1.4      49      82 ..     527     560 ..     521     601 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 0.00019
       Rad17  46 riLLisGPsGCgkstvvkvLskelgiklrewlnpvsl 82 
                 r +L+ GP+GCgk+   + L+ elg+ +   + p  +
  EPX74420.1 204 RGVLLHGPPGCGKTMLANALAAELGVPFLSISAPSIV 240
                 55799********************988777777654 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.004
       Rad17  49 LisGPsGCgkstvvkvLskelgiklrewlnpvsl 82 
                 L+ GP+GCgk+   k ++ e   +++    p +l
  EPX74420.1 527 LLWGPPGCGKTLLAKAVANESKANFISIRGPELL 560
                 899*********9999999988777766666554 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.0   0.00064      0.22      33     118 ..     203     280 ..     193     295 .. 0.72
   2 !    8.7   0.0    0.0033       1.1      35      62 ..     525     551 ..     514     600 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00064
       AAA_7  33 kkpvllvGptGtGKtviikdllkkldkekylsltinfsaqtsanqlqdiiesklekrrkgvyg.PpggkklvvFvDDlnmpakekyg 118
                  + vll Gp G+GKt++++ l  +l         + f +  sa ++ + +  + ek+ ++v+  ++    +++F+D+++  ++ +  
  EPX74420.1 203 PRGVLLHGPPGCGKTMLANALAAELG--------VPFLS-ISAPSIVSGMSGESEKKVRDVFEeAKLLAPCLMFIDEIDAVTPKRES 280
                 5679****************999988........33332.34556667777888888888886245667788888887765555544 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0033
       AAA_7  35 pvllvGptGtGKtviikdllkkldkeky 62 
                  vll Gp G+GKt+++k + ++ +  ++
  EPX74420.1 525 GVLLWGPPGCGKTLLAKAVANESK-ANF 551
                 69***************9998877.444 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.0   0.00073      0.25       7      37 ..     173     221 ..     163     229 .. 0.83
   2 ?    0.6   0.0      0.89     3e+02     125     154 ..     271     300 ..     248     303 .. 0.84
   3 ?    6.8   0.0     0.011       3.8      16      38 ..     520     542 ..     513     552 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00073
      ATPase   7 glDeilk..................gGipegrvvlitGepGtGKtifal 37 
                 glDe ++                   Gi   r vl+ G pG+GKt++a 
  EPX74420.1 173 GLDECITelletvampikhpevyqhTGIQPPRGVLLHGPPGCGKTMLAN 221
                 77777755777777777788888779********************997 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.89
      ATPase 125 iDsitglayeekeavaReilrqlvrvlkkl 154
                 iD +t+  ++++ ++ R+i+ q+++ l +l
  EPX74420.1 271 IDAVTPKRESAQREMERRIVAQFLTCLDEL 300
                 6777777888999999******99998775 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.011
      ATPase  16 ipegrvvlitGepGtGKtifalq 38 
                 i     vl+ G pG+GKt++a+ 
  EPX74420.1 520 ITAPCGVLLWGPPGCGKTLLAKA 542
                 55556699************985 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0    0.0099       3.4      23      43 ..     204     224 ..     188     240 .. 0.85
   2 ?   -1.6   0.0       5.7   1.9e+03     104     128 ..     284     308 ..     248     332 .. 0.68
   3 !   10.8   0.0   0.00087      0.29      21      54 ..     522     552 ..     511     648 .. 0.89

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0099
                      S-EEEECSTTSSHHHHHHHHH CS
  Sigma54_activat  23 lsvlitGesGtGKellaraih 43 
                        vl++G  G+GK++la+a+ 
       EPX74420.1 204 RGVLLHGPPGCGKTMLANALA 224
                      679***************986 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 5.7
                      GS-HHHHHHHHHHHHHSEEESBTSS CS
  Sigma54_activat 104 elplelQekLlrvlqegevervGss 128
                      e++ ++ +++l++l+e ++e  G++
       EPX74420.1 284 EMERRIVAQFLTCLDELSFENTGGK 308
                      4445555666777777777776665 PP

  == domain 3  score: 10.8 bits;  conditional E-value: 0.00087
                      SSS-EEEECSTTSSHHHHHHHHHHHSTTTTS-EE CS
  Sigma54_activat  21 tdlsvlitGesGtGKellaraiheaskrkekpfv 54 
                       ++ vl+ G  G+GK+lla+a+ ++sk   ++f+
       EPX74420.1 522 APCGVLLWGPPGCGKTLLAKAVANESK---ANFI 552
                      56789*****************99887...4455 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.0    0.0091       3.1      23      39 ..     206     222 ..     201     228 .. 0.86
   2 ?    1.0   0.0      0.59     2e+02      48      79 ..     329     360 ..     307     372 .. 0.85
   3 !    8.8   0.0    0.0024      0.82      23      45 ..     526     548 ..     521     552 .. 0.88

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0091
                 EEEEESTTSSHHHHHHH CS
      NB-ARC  23 valvGmgGvGKttlakq 39 
                 v l+G +G+GKt la+ 
  EPX74420.1 206 VLLHGPPGCGKTMLANA 222
                 679***********986 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.59
                 CCCBTEEEEEEEESXXHHHHHHHXXHHHHHCC CS
      NB-ARC  48 egrFdsvawvvvsktdkseeiletilkeLsls 79 
                  grFd+ + ++v ++ + e+il+t++k L ls
  EPX74420.1 329 AGRFDREICLTVPNEESRERILRTMAKGLRLS 360
                 469************************99876 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.0024
                 EEEEESTTSSHHHHHHHHCCSHC CS
      NB-ARC  23 valvGmgGvGKttlakqilnksd 45 
                 v l G +G+GKt lak + n+s+
  EPX74420.1 526 VLLWGPPGCGKTLLAKAVANESK 548
                 6689**************99954 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0     0.072        24      51      78 ..     201     228 ..     159     235 .. 0.81
   2 !   13.6   0.0   8.4e-05     0.028      55     117 ..     525     592 ..     516     651 .. 0.70

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.072
      DUF815  51 lpannvLLwGarGtGKSslvkallneya 78 
                 +p + vLL G  G+GK  l  al +e+ 
  EPX74420.1 201 QPPRGVLLHGPPGCGKTMLANALAAELG 228
                 67788*****************998875 PP

  == domain 2  score: 13.6 bits;  conditional E-value: 8.4e-05
      DUF815  55 nvLLwGarGtGKSslvkallneyaeeg..Lrlievekedlkelpklvellr...erperfilfvDDLs 117
                  vLLwG  G+GK  l ka+ ne +++   +r  e+ ++ + e ++ v+++    +++  +++f D L 
  EPX74420.1 525 GVLLWGPPGCGKTLLAKAVANESKANFisIRGPELLNKYVGESERAVRQVFaraRASSPCVIFFDELD 592
                 59********************9999856677899999999999888888622244567899999874 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   3.6      0.63   2.1e+02     149     180 ..      91     156 ..      35     164 .. 0.42
   2 !    8.9   0.0    0.0033       1.1      20      41 ..     206     227 ..     190     296 .. 0.81
   3 !    7.7   0.0    0.0083       2.8      20      41 ..     526     547 ..     504     584 .. 0.71

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.63
      AAA_11 149 k..................................eklkkskekskskleqerrklkkerkelske 180
                 +                                  ++ kks+++++ k++ +r+k ++++k+l+++
  EPX74420.1  91 SdpedsnssrlmevkdtnvvnksitslwntsnpttDEDKKSSNQENTKRKDRRSKTSSSAKRLKST 156
                 122223334444444444444455555544433333344444444444444444444444444333 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0033
      AAA_11  20 tliqGPPGtgKTktivellsql 41 
                 +l++GPPG+gKT    +l ++l
  EPX74420.1 206 VLLHGPPGCGKTMLANALAAEL 227
                 79**********8877777766 PP

  == domain 3  score: 7.7 bits;  conditional E-value: 0.0083
      AAA_11  20 tliqGPPGtgKTktivellsql 41 
                 +l++GPPG+gKT    ++ ++ 
  EPX74420.1 526 VLLWGPPGCGKTLLAKAVANES 547
                 699*********8888777777 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.9         4   1.3e+03     111     173 ..      99     158 ..      90     162 .. 0.61
   2 !    8.3   0.0    0.0051       1.7       2      24 ..     207     230 ..     206     276 .. 0.59
   3 !    8.9   0.0    0.0034       1.2       5      70 ..     530     590 ..     526     594 .. 0.67

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 4
  Viral_helicase1 111 lahlpsslshrvgrrttyllpsdvaeilsakvgteveversgelkvetepkgqekvlvyltft 173
                       +  +++ +++v++++t+l+++      ++k +++++ + + +++++ ++++   + + +t+t
       EPX74420.1  99 SRLMEVKDTNVVNKSITSLWNTSNPTTDEDK-KSSNQENTKRKDRRSKTSSSA--KRLKSTET 158
                      4455666679999999998888766666666.555555555555445555444..55555555 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.0051
  Viral_helicase1   2 vvhGvpGcGKStlirkllrts.li 24 
                      + hG pGcGK+ l   l+ +  + 
       EPX74420.1 207 LLHGPPGCGKTMLANALAAELgVP 230
                      68*********9998888774533 PP

  == domain 3  score: 8.9 bits;  conditional E-value: 0.0034
  Viral_helicase1   5 GvpGcGKStlirkllrts.liltvnrptaelltegkpklpnlsvrtvdsflmalvkstkgkililDE 70 
                      G pGcGK+ l + ++++s  ++ ++r   ell++ + +++ + vr v +   a ++ +   ++++DE
       EPX74420.1 530 GPPGCGKTLLAKAVANESkANFISIRG-PELLNKYVGESE-RAVRQVFARARASSP-C---VIFFDE 590
                      77***************8888878887.788888773333.334444433333332.2...666676 PP

>> Sigma54_activ_2  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0    0.0073       2.5      24      45 ..     206     227 ..     200     292 .. 0.64
   2 !    8.5   0.0    0.0061       2.1      22      48 ..     524     550 ..     511     632 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0073
                      EEEEEETT--HHHHHHCC--TT CS
  Sigma54_activ_2  24 vfltGekGsgkelvArlLhkns 45 
                      v+l G++G+gk++ A++L+ + 
       EPX74420.1 206 VLLHGPPGCGKTMLANALAAEL 227
                      9*****************8653 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0061
                      S-EEEEEETT--HHHHHHCC--TTS-E CS
  Sigma54_activ_2  22 lpvfltGekGsgkelvArlLhknsgpw 48 
                        v+l G++G+gk+l A++ +++s  +
       EPX74420.1 524 CGVLLWGPPGCGKTLLAKAVANESKAN 550
                      569*****************9988764 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.0     0.011       3.8       5      22 ..     206     223 ..     203     274 .. 0.90
   2 !    9.0   0.0    0.0031       1.1       5      23 ..     526     546 ..     523     595 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.011
      AAA_24   5 iliyGpsgiGKTtlakel 22 
                 +l+ Gp+g GKT+la+ l
  EPX74420.1 206 VLLHGPPGCGKTMLANAL 223
                 799************987 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0031
      AAA_24   5 iliyGpsgiGKTtlakel..g 23 
                 +l++Gp+g GKT lak    +
  EPX74420.1 526 VLLWGPPGCGKTLLAKAVanE 546
                 79*************988653 PP

>> AFG1_ATPase  AFG1-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.0   0.00061      0.21      57      81 ..     198     222 ..     149     307 .. 0.85
   2 ?    4.4   0.0     0.043        15      59      79 ..     520     540 ..     498     547 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00061
  AFG1_ATPase  57 ksvepvrglYlwGgvGrGKtylmdl 81 
                  +  +p+rg+ l+G+ G GKt+l + 
   EPX74420.1 198 TGIQPPRGVLLHGPPGCGKTMLANA 222
                  5679*****************9765 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.043
  AFG1_ATPase  59 vepvrglYlwGgvGrGKtylm 79 
                   +++ g+ lwG+ G GKt l 
   EPX74420.1 520 ITAPCGVLLWGPPGCGKTLLA 540
                  57899*************985 PP

>> Parvo_NS1  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.0   0.0     0.004       1.4     117     136 ..     206     225 ..     197     229 .. 0.87
   2 !    7.6   0.0    0.0051       1.7     117     137 ..     526     546 ..     525     550 .. 0.90

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.004
   Parvo_NS1 117 vwfyGpantGktnlaeaIak 136
                 v+++Gp+ +Gkt+la+a+a 
  EPX74420.1 206 VLLHGPPGCGKTMLANALAA 225
                 899***************96 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0051
   Parvo_NS1 117 vwfyGpantGktnlaeaIaka 137
                 v+++Gp+ +Gkt la+a a+ 
  EPX74420.1 526 VLLWGPPGCGKTLLAKAVANE 546
                 799**************9986 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0    0.0044       1.5      22      42 ..     206     226 ..     197     229 .. 0.88
   2 !    7.3   0.1    0.0084       2.8      22      41 ..     526     545 ..     516     554 .. 0.87

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0044
                 EEEE--TTSSTTHHHHHHHHH CS
        PhoH  22 vfaiGpaGtGKtylavalave 42 
                 v   Gp G+GKt+la ala+e
  EPX74420.1 206 VLLHGPPGCGKTMLANALAAE 226
                 6778**************987 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0084
                 EEEE--TTSSTTHHHHHHHH CS
        PhoH  22 vfaiGpaGtGKtylavalav 41 
                 v   Gp G+GKt+la a+a 
  EPX74420.1 526 VLLWGPPGCGKTLLAKAVAN 545
                 5678***********99985 PP

>> SKI  Shikimate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0    0.0029      0.97       1      21 [.     212     232 ..     212     258 .. 0.89
   2 ?    6.6   0.0     0.024         8       1      21 [.     532     552 ..     532     578 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0029
                 TTSSHHHHHHHHHHHHTSEEE CS
         SKI   1 mGaGKstvGkllAkklglefi 21 
                 +G+GK+ ++++lA +lg++f+
  EPX74420.1 212 PGCGKTMLANALAAELGVPFL 232
                 6******************97 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.024
                 TTSSHHHHHHHHHHHHTSEEE CS
         SKI   1 mGaGKstvGkllAkklglefi 21 
                 +G+GK+ ++k++A++ + +fi
  EPX74420.1 532 PGCGKTLLAKAVANESKANFI 552
                 6****************9998 PP

>> Hydin_ADK  Hydin Adenylate kinase-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   1.3      0.19        64      93     145 ..      97     151 ..      48     178 .. 0.48
   2 !   10.7   0.0    0.0014      0.46       2      31 ..     206     235 ..     205     251 .. 0.87
   3 ?   -0.6   0.0       4.2   1.4e+03      44     153 ..     328     441 ..     320     449 .. 0.53
   4 ?    1.0   0.0       1.3   4.6e+02       3      30 ..     527     554 ..     525     556 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.19
   Hydin_ADK  93 saaeekaas..skiskkkktsvvsgkkkaesegaksqkqkekkts.etaqissspp 145
                 +++  ++    + + +k+ ts+ ++++ +  e++ks++q+++k + +++++sss +
  EPX74420.1  97 NSSRLME-VkdTNVVNKSITSLWNTSNPTTDEDKKSSNQENTKRKdRRSKTSSSAK 151
                 1111111.112333333444444444333333333333333333303333333332 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.0014
   Hydin_ADK   2 iivhGaPlsGKtatavtLakkYeaAlltiD 31 
                 +++hG+P  GKt  a +La + +  +l+i 
  EPX74420.1 206 VLLHGPPGCGKTMLANALAAELGVPFLSIS 235
                 689************************995 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 4.2
   Hydin_ADK  44 saGlrArelCaeaaieqaekekeeaaeeaekkegqlsvealvkktselssaaeekaas....skiskkkktsvvsgkkkaesegaksqkqke.kktset 137
                  aG   re+C++   e++ ++  ++ ++  + +g+    +l+k+t     a  + a +     ++ k+  +++   kk ae  +a++  q+e +   ++
  EPX74420.1 328 RAGRFDREICLTVPNEESRERILRTMAKGLRLSGNFDFRQLAKQTPGYVGADLK-ALTsaagVIAIKRIFNELTALKKDAEDPNAMQTDQEEiTLDMDS 425
                 567777999999999999988888888888888887777777777743322222.11112222222222222222233333333333333330222333 PP

   Hydin_ADK 138 aqissspplaapiarr 153
                 a  +++ ++++ i+r 
  EPX74420.1 426 ADDNNEDMHMSVIQRY 441
                 3444455555555555 PP

  == domain 4  score: 1.0 bits;  conditional E-value: 1.3
   Hydin_ADK   3 ivhGaPlsGKtatavtLakkYeaAllti 30 
                 ++ G+P  GKt  a ++a + +a +++i
  EPX74420.1 527 LLWGPPGCGKTLLAKAVANESKANFISI 554
                 678***************9999998887 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0     0.025       8.3      23      44 ..     206     227 ..     194     313 .. 0.80
   2 !    8.4   0.0    0.0056       1.9      24      45 ..     527     548 ..     522     573 .. 0.89

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.025
    ATPase_2  23 yfiYGpegsGKtaLlkeiienl 44 
                 +++ Gp g+GKt L + ++ +l
  EPX74420.1 206 VLLHGPPGCGKTMLANALAAEL 227
                 6789**********99988776 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.0056
    ATPase_2  24 fiYGpegsGKtaLlkeiienle 45 
                 +++Gp g+GKt L k ++++++
  EPX74420.1 527 LLWGPPGCGKTLLAKAVANESK 548
                 689************9999885 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.0     0.013       4.5      26      54 ..     194     222 ..     188     229 .. 0.84
   2 ?    1.2   0.0      0.63   2.1e+02     105     142 ..     245     285 ..     232     294 .. 0.71
   3 ?    4.4   0.0     0.065        22      33      60 ..     521     548 ..     497     556 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.013
        TniB  26 LleypkrkrmpnlllvGdsnnGKtmivek 54 
                 ++++   + ++ +ll+G++ +GKtm+++ 
  EPX74420.1 194 VYQHTGIQPPRGVLLHGPPGCGKTMLANA 222
                 566777777899**************986 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.63
        TniB 105 skleqqvlrllrelk...vrvLiiDEihnllagsarkqref 142
                  + e++v  +++e k   + ++ iDEi+ +   + ++qre+
  EPX74420.1 245 GESEKKVRDVFEEAKllaPCLMFIDEIDAVTPKRESAQREM 285
                 45555555555554411167999********9999999987 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.065
        TniB  33 krmpnlllvGdsnnGKtmivekFarlhp 60 
                 + +  +ll+G++ +GKt +++  a++ +
  EPX74420.1 521 TAPCGVLLWGPPGCGKTLLAKAVANESK 548
                 556679*************998887665 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.0     0.011       3.9       5      48 ..     205     248 ..     202     257 .. 0.73
   2 ?    4.8   0.0     0.051        17       6      43 ..     526     563 ..     522     574 .. 0.72

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.011
                 EEEEE-STTSSHHHHHHHHHHSS---B---S.S-EEETTG...GG CS
       SRPRB   5 avllvGlsdsGKTslftrLttdsvkktvtSq.essaalkvksekg 48 
                  vll G+  +GKT+l + L  +   +   S+ ++s++  +++e +
  EPX74420.1 205 GVLLHGPPGCGKTMLANALAAELGVP-FLSIsAPSIVSGMSGESE 248
                 599***************99875544.445546666666655544 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.051
                 EEEE-STTSSHHHHHHHHHHSS---B---S.S-EEETTG CS
       SRPRB   6 vllvGlsdsGKTslftrLttdsvkktvtSq.essaalkv 43 
                 vll G+  +GKT+l + + ++  k   +S+  +++ +k+
  EPX74420.1 526 VLLWGPPGCGKTLLAKAVANE-SKANFISIrGPELLNKY 563
                 89**********987766555.55566676666666666 PP

>> CPT  Chloramphenicol phosphotransferase-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0    0.0011      0.36       4      47 ..     206     249 ..     204     291 .. 0.87
   2 ?    2.0   0.0       0.5   1.7e+02       4      32 ..     526     554 ..     525     570 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.0011
                 EEEEE-TTSSHHHHHHHHHHHSSS-EEEEEHHHHHHHS-GGGGT CS
         CPT   4 ilLnGgsssGKsslaralqevldepwlhlgvDafvealppkrqd 47 
                 +lL+G +  GK+ la+al + l  p+l +   + v  +  +  +
  EPX74420.1 206 VLLHGPPGCGKTMLANALAAELGVPFLSISAPSIVSGMSGESEK 249
                 89***************************999988888766655 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.5
                 EEEEE-TTSSHHHHHHHHHHHSSS-EEEE CS
         CPT   4 ilLnGgsssGKsslaralqevldepwlhl 32 
                 +lL G +  GK+ la+a+ + +++ ++ +
  EPX74420.1 526 VLLWGPPGCGKTLLAKAVANESKANFISI 554
                 799****************9999999877 PP

>> Cytidylate_kin  Cytidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.0    0.0067       2.3       3      29 ..     208     234 ..     206     238 .. 0.90
   2 ?    3.8   0.0      0.12        41       4      28 ..     529     553 ..     526     555 .. 0.90

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0067
                     EE-STTSSHHHHHHHHHHHHT-EEEEH CS
  Cytidylate_kin   3 iDGPagsGKssvaralaeklglkyldt 29 
                     + GP g GK  +a ala +lg+ +l+ 
      EPX74420.1 208 LHGPPGCGKTMLANALAAELGVPFLSI 234
                     68*********************9975 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.12
                     E-STTSSHHHHHHHHHHHHT-EEEE CS
  Cytidylate_kin   4 DGPagsGKssvaralaeklglkyld 28 
                      GP g GK  +a+a+a++ ++++++
      EPX74420.1 529 WGPPGCGKTLLAKAVANESKANFIS 553
                     59****************9999875 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0     0.056        19       2      28 ..     206     229 ..     205     271 .. 0.88
   2 ?    6.5   0.0     0.022       7.3       2      32 ..     526     556 ..     525     574 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.056
                 EEEE--TTSSHHHHHHHHHHHH...GG CS
    NTPase_1   2 vfiTGppGvGKtTlvkkvlellkssgv 28 
                 v++ GppG GKt l + ++ +l   gv
  EPX74420.1 206 VLLHGPPGCGKTMLANALAAEL---GV 229
                 6789***********9999988...54 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.022
                 EEEE--TTSSHHHHHHHHHHHH...GGGEEE CS
    NTPase_1   2 vfiTGppGvGKtTlvkkvlellkssgvkvgG 32 
                 v++ GppG GKt l k v+++ k + ++++G
  EPX74420.1 526 VLLWGPPGCGKTLLAKAVANESKANFISIRG 556
                 6788***************999888777777 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.1      0.03        10      12      34 ..     205     227 ..     198     301 .. 0.73
   2 ?    5.0   0.1     0.085        29      13      32 ..     526     545 ..     518     556 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.03
      AAA_19  12 vllvtaGpGtGKTrvlkhivall 34 
                  +l+ ++pG+GKT + ++  a+l
  EPX74420.1 205 GVLLHGPPGCGKTMLANALAAEL 227
                 5899*********9988877765 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.085
      AAA_19  13 llvtaGpGtGKTrvlkhiva 32 
                 +l+ ++pG+GKT + k++ +
  EPX74420.1 526 VLLWGPPGCGKTLLAKAVAN 545
                 6899********98777665 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.047        16       4      23 ..     206     225 ..     204     228 .. 0.89
   2 ?    5.7   0.0     0.034        11       4      24 ..     526     546 ..     524     551 .. 0.91

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.047
   PduV-EutP   4 illiGkvgsGKttLtqalkg 23 
                 +ll G+ g+GKt L++al  
  EPX74420.1 206 VLLHGPPGCGKTMLANALAA 225
                 8999************9976 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.034
   PduV-EutP   4 illiGkvgsGKttLtqalkge 24 
                 +ll G+ g+GKt L++a+ +e
  EPX74420.1 526 VLLWGPPGCGKTLLAKAVANE 546
                 7999*************9987 PP

>> Bac_DnaA  Bacterial dnaA  protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0       0.2        69      37      57 ..     206     226 ..     194     360 .. 0.89
   2 ?    7.2   0.0     0.012         4      37      65 ..     526     554 ..     521     684 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.2
                 EEEE-SSSSSHHHHHHHHHHH CS
    Bac_DnaA  37 lfiygevGlGktHLlkaigne 57 
                 ++++g+ G Gkt L +a++ e
  EPX74420.1 206 VLLHGPPGCGKTMLANALAAE 226
                 799************999876 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.012
                 EEEE-SSSSSHHHHHHHHHHHHHHHSSSS CS
    Bac_DnaA  37 lfiygevGlGktHLlkaignevlenapel 65 
                 ++++g+ G Gkt L ka++ne ++n+ + 
  EPX74420.1 526 VLLWGPPGCGKTLLAKAVANESKANFISI 554
                 799*****************998887655 PP

>> Guanylate_kin  Guanylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0     0.042        14       3      34 ..     204     236 ..     202     241 .. 0.83
   2 ?   -1.5   0.0       5.1   1.7e+03      77     101 ..     242     269 ..     233     282 .. 0.77
   3 ?    1.7   0.0      0.54   1.8e+02       5      31 ..     526     552 ..     524     558 .. 0.88
   4 ?   -1.2   0.0       4.1   1.4e+03      77      95 ..     562     580 ..     556     594 .. 0.81
   5 ?   -1.5   0.0       5.2   1.8e+03      89     154 ..     707     774 ..     688     775 .] 0.72

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.042
                    SEEEEESTTTSSHHHHHHHHHHHSTTTE.EE-- CS
  Guanylate_kin   3 rpvvlvgpsgaGksslkkaLlselpekf.gvsv 34 
                    r v l gp g Gk +l +aL +el   f ++s 
     EPX74420.1 204 RGVLLHGPPGCGKTMLANALAAELGVPFlSISA 236
                    67899***************9998887744655 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 5.1
                    EEEEEEHHHHHHHHHTTSE...EEEE-- CS
  Guanylate_kin  77 nlygtsveaieevlekgki...viLDvd 101
                     + g+s ++++ v+e++k    +++ +d
     EPX74420.1 242 GMSGESEKKVRDVFEEAKLlapCLMFID 269
                    57799999******99997666665555 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.54
                    EEEESTTTSSHHHHHHHHHHHSTTTEE CS
  Guanylate_kin   5 vvlvgpsgaGksslkkaLlselpekfg 31 
                    v l gp g Gk  l ka+ +e + +f 
     EPX74420.1 526 VLLWGPPGCGKTLLAKAVANESKANFI 552
                    6799***************99999884 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 4.1
                    EEEEEEHHHHHHHHHTTSE CS
  Guanylate_kin  77 nlygtsveaieevlekgki 95 
                    ++ g+s  a+++v++ ++ 
     EPX74420.1 562 KYVGESERAVRQVFARARA 580
                    688***********99987 PP

  == domain 5  score: -1.5 bits;  conditional E-value: 5.2
                    HHHTTSEEEEE--CHHHHHHHHTTTTEEEEEEEES..SHHHHHHHHTTSSSSHHHHHHHHHHHHHHHH CS
  Guanylate_kin  89 vlekgkiviLDvdiqavkqlrkaelspiivFikpp..slkelqrrlksrgkeqeeklakrlaaaekel 154
                    v +    v+ D+  + ++  +++  +pi v ++      k+++  +  r +++ + lakr + a +e+
     EPX74420.1 707 VTALRSAVFQDIASNEPEMTQHTANAPIRVTMADFdlAFKNIRPSVSDRDRQKYQRLAKRWSSASQEV 774
                    55666678899999999999999999999988643114467777777788888888888888777765 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.0    0.0096       3.2       4      25 ..     206     227 ..     203     257 .. 0.80
   2 ?    3.4   0.0      0.11        36       6      25 ..     528     547 ..     524     580 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0096
     DUF2075   4 vlVtGvaGtGKtvvllnllael 25 
                 vl +G +G GKt+++++l+ael
  EPX74420.1 206 VLLHGPPGCGKTMLANALAAEL 227
                 6889***************998 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.11
     DUF2075   6 VtGvaGtGKtvvllnllael 25 
                   G +G GKt+++ ++++e 
  EPX74420.1 528 LWGPPGCGKTLLAKAVANES 547
                 5699**********999997 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.034        12      20      39 ..     205     224 ..     193     228 .. 0.83
   2 ?    3.8   0.0      0.12        40      22      41 ..     527     546 ..     521     557 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.034
      AAA_30  20 vavltGpAGtGKttalkalr 39 
                  ++l+Gp+G GKt++ +al+
  EPX74420.1 205 GVLLHGPPGCGKTMLANALA 224
                 5789**********999986 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.12
      AAA_30  22 vltGpAGtGKttalkalrea 41 
                 +l Gp+G GKt + ka+++ 
  EPX74420.1 527 LLWGPPGCGKTLLAKAVANE 546
                 678***********999765 PP

>> ADK  Adenylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0     0.052        18       1      26 [.     208     233 ..     208     266 .. 0.84
   2 ?    3.8   0.0      0.17        57       1      26 [.     528     553 ..     528     573 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.052
                 EEESTTSSHHHHHHHHHHHHTSEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx RF
         ADK   1 llGaPgaGKGtqaeklvkkyglahls 26 
                 l G+Pg+GK   a+ l+ ++g++ ls
  EPX74420.1 208 LHGPPGCGKTMLANALAAELGVPFLS 233
                 57******************999887 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.17
                 EEESTTSSHHHHHHHHHHHHTSEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx RF
         ADK   1 llGaPgaGKGtqaeklvkkyglahls 26 
                 l G+Pg+GK   a+ ++++ +++ +s
  EPX74420.1 528 LWGPPGCGKTLLAKAVANESKANFIS 553
                 57**************9998887776 PP

>> IPT  Isopentenyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.042        14       5      32 ..     207     234 ..     204     248 .. 0.92
   2 ?    3.8   0.0     0.093        31       5      31 ..     527     553 ..     525     555 .. 0.90

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.042
         IPT   5 lifGatttGKtaeaiklaketgapvivl 32 
                 l++G+ + GKt  a +la e g+p +++
  EPX74420.1 207 LLHGPPGCGKTMLANALAAELGVPFLSI 234
                 899*********************9875 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.093
         IPT   5 lifGatttGKtaeaiklaketgapviv 31 
                 l++G+ + GKt  a ++a+e  a  i+
  EPX74420.1 527 LLWGPPGCGKTLLAKAVANESKANFIS 553
                 89****************999887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (775 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1311  (0.0731218); expected 358.6 (0.02)
Passed bias filter:                      714  (0.0398237); expected 358.6 (0.02)
Passed Vit filter:                       112  (0.00624686); expected 17.9 (0.001)
Passed Fwd filter:                        53  (0.0029561); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              53  [number of targets reported over threshold]
# CPU time: 0.94u 0.34s 00:00:01.28 Elapsed: 00:00:00.50
# Mc/sec: 4698.93
//
Query:       EPX74421.1  [L=215]
Description: COPII vesicle coat component Erp5/Erp6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.9e-35  120.3   1.3      1e-34  120.1   1.3    1.0  1  EMP24_GP25L  emp24/gp25L/p24 family/GOLD


Domain annotation for each model (and alignments):
>> EMP24_GP25L  emp24/gp25L/p24 family/GOLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.1   1.3   5.7e-39     1e-34       1     181 [.      19     209 ..      19     210 .. 0.92

  Alignments for each domain:
  == domain 1  score: 120.1 bits;  conditional E-value: 5.7e-39
  EMP24_GP25L   1 altfklpageekCfyeelkkgtlltgsyqvtdgg.........aaldvdlsvkdpdgngerlvkkkdresegdfsftakesgeykvCfdnsfstkss. 88 
                  a++f+ +  ++kCf ++++kg ++tgs+q ++ +         ++ +++++v +++ n+++ ++k+   ++ + +ft + +g++++C  + + +  + 
   EPX74421.1  19 AVYFYFDGSKPKCFLKDMSKGRMVTGSIQPEQWNeelkkwvpnEKTKIRVQVDETFANNHITYQKSLMNKD-KLRFTPQNEGTHRICYISDS-DGGWf 114
                  689****************************9999999***9877999*****************999888.***************99864.44566 PP

  EMP24_GP25L  89 ..kkvsfdievgseasdykdsak.kekletleselkkleekldsikreqkylrereerlrdtnestnsrvvwwsilqllvlvlvavlqvyyLkrfF 181
                     k ++ +++gs+++ y+ +a  +++ +++ ++++ l+++l+s+++eq  +r+re  +rd +e +nsrvv+w+++q+++l++++++q+ +L++fF
   EPX74421.1 115 ssTKTRLHVDIGSDDK-YNLIASsEDEAKNVADRVEALNSRLESVYKEQLKQRNREMAFRDSSEHANSRVVKWTFVQIVILLVTSAWQLSHLQHFF 209
                  7899999999999875.454444599*********************************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1110  (0.0619109); expected 358.6 (0.02)
Passed bias filter:                      528  (0.0294495); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 1482.97
//
Query:       EPX74422.1  [L=383]
Description: hypothetical protein SOCG_03631 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (383 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1349  (0.0752412); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 2713.63
//
Query:       EPX74423.1  [L=323]
Description: hypothetical protein SOCG_03632 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.026   14.9  10.0      0.039   14.3   0.8    2.8  3  ATP-synt_I  ATP synthase I chain


Domain annotation for each model (and alignments):
>> ATP-synt_I  ATP synthase I chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.5   0.00083        15       4      41 ..       5      42 ..       2      47 .. 0.82
   2 ?   14.3   0.8   2.2e-06     0.039      42      92 ..     150     198 ..     144     200 .. 0.81
   3 ?   -2.5   0.1      0.37   6.7e+03      73      86 ..     217     230 ..     206     238 .. 0.61

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.00083
  ATP-synt_I  4 liqlvllavlalgwlltgsasvalsallGglisvlpfa 41
                 + +++l +++++w+++  as+ +   +G+l ++++ +
  EPX74423.1  5 SLLWLILTFICVVWIISRPASYNVFKSCGFLSAFFASL 42
                56799************888877777799999988765 PP

  == domain 2  score: 14.3 bits;  conditional E-value: 2.2e-06
  ATP-synt_I  42 lfalrvfrfsgalarkkkkivrslylgeairlaltiallilalklvkelsl 92 
                 l+a  +  ++++l+++ kki  s++  +ai+++++++ l +++ +++++sl
  EPX74423.1 150 LMAANT-TYNRSLQKGFKKIR-SFLSEYAIKYLIILVFLRAIIFIIHKFSL 198
                 444444.59999999888885.5****************999999999876 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 0.37
  ATP-synt_I  73 laltiallilalkl 86 
                  +l ++ +i+ l++
  EPX74423.1 217 NVLFLVFFIFCLQW 230
                 44455555544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1345  (0.0750181); expected 358.6 (0.02)
Passed bias filter:                      576  (0.0321267); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2363.16
//
Query:       EPX74424.1  [L=333]
Description: STE/STE7/MEK1 protein kinase Byr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.9e-60  202.4   0.0    2.1e-59  201.1   0.0    1.6  2  Pkinase         Protein kinase domain
    3.2e-36  125.0   0.0    7.4e-36  123.7   0.0    1.5  2  Pkinase_Tyr     Protein tyrosine kinase
  ------ inclusion threshold ------
      0.012   14.5   0.0      0.017   14.0   0.0    1.1  1  Pkinase_fungal  Fungal protein kinase
      0.067   12.5   0.0       0.23   10.7   0.0    1.8  2  Kinase-like     Kinase-like


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.31   1.4e+03     222     249 ..      19      46 ..       9      51 .. 0.80
   2 !  201.1   0.0   4.6e-63   2.1e-59       3     264 .]      61     313 ..      59     313 .. 0.92

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.31
                 SHH...HHHTTS-HHHHHHHHHHT-SSG CS
     Pkinase 222 etkeklpeaseiseeakdllkkllkkdp 249
                 +++e +++++++++++  +++++ ++++
  EPX74424.1  19 PKDELVDNQKTFEHNMETFMEQCANVNQ 46 
                 5567778889999999999999998875 PP

  == domain 2  score: 201.1 bits;  conditional E-value: 4.6e-63
                 EEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHHHH CS
     Pkinase   3 kleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseeeak 101
                 ++++lGeG+ G V  ++   ++  +A K++ +  ++k + k++lrE+ il+++++p+i+ +y++f ++++++l++ey+++g+l+ +l++ g ++ + + 
  EPX74424.1  61 VVRRLGEGNGGAVALVK--YKNLYMARKTVYVGANTKLQ-KQILRELGILHHCRSPFIIGFYGAFLNENSICLCVEYMDCGSLDAILREGGPIPLDILG 156
                 6899***********99..799***********999988.59********************************************************* PP

                 HHHHHHHHHHHHHH.HTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-STTT CS
     Pkinase 102 kiakqilegleylH.skgiiHrDlKpeNiLidekgelKitDFGlakelessskltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgkppfsg 199
                  i++++++gl yl+  ++iiHrDlKp+N++i++ g +K++DFG++ el +s  +++fvgts+Y++PE + + +ys k+D+WslG++++el t++ p+  
  EPX74424.1 157 CIINSMVKGLIYLYnVMHIIHRDLKPSNVIINSLGYIKLCDFGVSGELVNSI-AHTFVGTSTYMSPERICGGDYSVKSDIWSLGITIIELATQELPWC- 253
                 **************7799********************************99.*********************************************. PP

                 SSHHHHHHHHHHTHHHHHHHCT.SHH....HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 200 ekgkekvekeldqlekilkilg.etkek.lpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                         + +++ + il++++  ++e+  + +++++e+++ +++ +l+kdp+ R + +el++ py+
  EPX74424.1 254 -------FSGVNEPMGILDVMHcIVQEDpPRLPDSFPEDLRLFVDACLHKDPNLRASPQELCAMPYF 313
                 .......33455556667777763444405567889******************************8 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1      0.45     2e+03     226     248 ..      26      46 ..      19      50 .. 0.73
   2 !  123.7   0.0   1.7e-39   7.4e-36       2     255 ..      60     307 ..      59     310 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.45
                  BBTTSBHHHHHHHHHHT-SSGGG CS
  Pkinase_Tyr 226 kpekcpeelyelmkkcweedpee 248
                  + ++ ++++ ++m++c + +  +
   EPX74424.1  26 NQKTFEHNMETFMEQCANVN--Q 46 
                  56677889999999998654..4 PP

  == domain 2  score: 123.7 bits;  conditional E-value: 1.7e-39
                  EEEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTT CS
  Pkinase_Tyr   2 elgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekek 99 
                  ++ ++lGeG+ G V   ++k      ++  a Kt+  +a+ + ++++l+e+ i+++++ p i+ ++g+ ++e+++++ +ey++ G+L+  Lr+    +
   EPX74424.1  60 TVVRRLGEGNGGAVALVKYK------NLYMARKTVYVGANTKLQKQILRELGILHHCRSPFIIGFYGAFLNENSICLCVEYMDCGSLDAILREG--GP 149
                  67899*************99......999999***99*******************************************************97..9* PP

                  SBHHHHHHHHHHHHHHHHHHHH.TTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHHH CS
  Pkinase_Tyr 100 ltlkdllsfalqvAkGmeyLes.kklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfGvllw 196
                  + l+ l +++  + kG+ yL + ++++Hrdl   Nv++++   +k++DfG++ ++      + +++      +m+pE +  + +++ksD+Ws G++++
   EPX74424.1 150 IPLDILGCIINSMVKGLIYLYNvMHIIHRDLKPSNVIINSLGYIKLCDFGVSGEL----VNSIAHTFVGTSTYMSPERICGGDYSVKSDIWSLGITII 243
                  ********************76379*****************************9....3344455666789************************** PP

                  HHHTTSSGT......TTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHH CS
  Pkinase_Tyr 197 Eiftlgesp......ypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfsel 255
                  E++t  e p       + +   +v++ + ++   + p++ pe+l  ++  c+++dp+ R++ +el
   EPX74424.1 244 ELAT-QELPwcfsgvNEPMGILDVMHCIVQEDPPRLPDSFPEDLRLFVDACLHKDPNLRASPQEL 307
                  ****.6777554443444555679***********************************987776 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   3.7e-06     0.017     312     397 ..     159     235 ..     141     238 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 3.7e-06
  Pkinase_fungal 312 lrDaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlkgeeHsyrhDL 397
                     +   +kg+  L++   i+HrD    N++i+     +     L D+ +  el +    s a++ +GT  +m+ e + g++ s+  D+
      EPX74424.1 159 INSMVKGLIYLYNVMHIIHRDLKPSNVIIN-----SLGYIKLCDFGVSGELVN----SIAHTFVGTSTYMSPERICGGDYSVKSDI 235
                     456799************************.....567777888888888874....56678999999999998888888777776 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.39   1.7e+03     122     154 ..      32      62 ..      28      96 .. 0.73
   2 ?   10.7   0.0   5.2e-05      0.23     165     250 ..     175     252 ..     166     269 .. 0.69

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.39
  Kinase-like 122 vdleilnkvlqkrsethkkletiarlllTlqli 154
                   ++e++++   +++++ +   +++ + lT+  +
   EPX74424.1  32 HNMETFMEQCANVNQRPACISDLSNQNLTV--V 62 
                  677777777777777777777777777777..3 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 5.2e-05
  Kinase-like 165 lvhgkftvdnllldekgglmlggftaLvragtkvvlsevekgfaPpEllgsrggytrknktkmthkldaWqlGlviyriwclklPl 250
                  ++h ++++ n++ +  g ++l +f+           ++++++f    +  s  +        ++ k d W lG++i  ++  +lP 
   EPX74424.1 175 IIHRDLKPSNVIINSLGYIKLCDFGVSGELV-----NSIAHTFVGTSTYMSPER---ICGGDYSVKSDIWSLGITIIELATQELPW 252
                  7788888888888888888888876322221.....333333333333322222...12247999*******************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (333 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       517  (0.028836); expected 358.6 (0.02)
Passed bias filter:                      480  (0.0267723); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2406.48
//
Query:       EPX74425.1  [L=1601]
Description: THO complex subunit Tho2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.6e-142  475.6   3.1   5.2e-142  474.7   3.1    1.5  1  THOC2_N   THO complex subunit 2 N-terminus
    2.1e-90  303.0   2.2    2.1e-90  303.0   2.2    2.8  3  Tho2      Transcription factor/nuclear export subunit protein
    5.7e-28   96.8   0.0    1.8e-27   95.2   0.0    2.0  1  Thoc2     Transcription- and export-related complex subunit
  ------ inclusion threshold ------
      0.014   15.1   0.0      0.034   13.8   0.0    1.6  1  PAM2      Ataxin-2 C-terminal region


Domain annotation for each model (and alignments):
>> THOC2_N  THO complex subunit 2 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  474.7   3.1  1.2e-145  5.2e-142      20     630 .]      32     660 ..      12     660 .. 0.85

  Alignments for each domain:
  == domain 1  score: 474.7 bits;  conditional E-value: 1.2e-145
     THOC2_N  20 klkqarsdededelsslfqellrsvlderlspedagsfvkeilkeeseesekskaedvaklfldvvsvldeeed..........lakllrklla..ati 106
                 +   ++ +e+ + l+sl   +l s++d+++s+ed+ +++k +l+ + e+     +  +++ ++d+++++d+e +          +++ l+ l+   ++ 
  EPX74425.1  32 H--AEKLSERPELLESLQDTILSSIVDDKTSIEDVEATLKYVLDISGEH-----NALLTTCLVDLFWLFDNELEnlchseglqkSRERLNYLVNslKSL 123
                 3..346788999999*****************************65444.....99***************9999********9999******9999** PP

     THOC2_N 107 iseslmreeldskllqelglvrdt.vferklirkstnllYrqkkyNLLrEeseGYSkLitelft....tsdseepseekaeetlervkaliGkFdLDpg 200
                 ++++++ ++ldsk+l+ ++l+++   ++rk+ r +t+llYrqkk+NLLrEe+eGYSkL++e++     +++++ +++   +++ er+k +iG+F+LDp+
  EPX74425.1 124 LPHEILLSRLDSKFLETISLTSNGdLLNRKIARTNTTLLYRQKKFNLLREENEGYSKLMVEIIDgyncFRSKTLETHILSSHINERIKTIIGSFNLDPN 222
                 ***************************************************************99888777766689999999**************** PP

     THOC2_N 201 RvLDviLdvfaavvvkqyrffvklLrasswwPrdeesewieetktlpp....................ggnrvaAqlLgfklrfysseaddelpenlly 279
                 +vLD+iL++f++++v+ ++ff++lL  s+w P+++++ w    +  ++                    g ++++Aq+Lg  l+ y  +++d+++e+ +y
  EPX74425.1 223 KVLDTILTIFSTNIVDGWKFFLELLSDSPWKPENQKKFWKDMSDDEQEkelgsflyeegslsfspvfsGKKSTMAQILGHDLQ-YLYNENDSTDESIYY 320
                 *********************************54444444443333333333444444444555554666***********9.778889********* PP

     THOC2_N 280 laAlLIkiGfislsdlYphLspddeemealkekyekeleekssekgsanaLamagaLsdddDtepkkekeakkkekakkkeeeekeeepepeklkd.qk 377
                 l+A+L k Gf  l +++phLsp+d++m++  ++y++++++ s++ ++ naL+ma++L+d++ t            ++  ++++  e+++ep+k+k+ qk
  EPX74425.1 321 LIAILLKYGFFGLDNIWPHLSPSDDDMSKEWDRYKNKVDDLSFK-AKGNALTMAAPLPDEE-T------------ETGVAASDVPEKQQEPAKPKSsQK 405
                 ********************************************.*************333.2............2233333333334444444455** PP

     THOC2_N 378 iqLlkaLLaiGalpeslfiLgryPwlaevdpeipelihRilehsleplyesvravplssee.kvae.dqsglpkgskvkltesp...kkrllrwpktdk 471
                 i  lkaLLaiG l+ sl iLgryP+++ ++p++++l+h++l++s  p+y+ + +++  s+e k    + + +p+  +++  + +    k+l +  ++  
  EPX74425.1 406 IGVLKALLAIGELKTSLAILGRYPFILRAFPDLANLYHKLLHVSFAPVYSFFSPQNRLSKEtKERLkQPKYVPTDVRLREITLRppdRKKLEYGIDPFG 504
                 ***************************************************998877777742222334444444333333333432333333333333 PP

     THOC2_N 472 pleldlnkkyrFyydeWkd.nlpvcqtvddvfklckellkllGvklgkdpeLlsklcrIgkksleeedeseenrerWldllrrlllPalsllkenpgvv 569
                  ++ +++++  F+y+e kd n+p  +t +d+ ++  ++l+l+G  l+ dp+L++klcrI+k  l    +s+e+r+ Wld++r +llP  sl+  n g+ 
  EPX74425.1 505 -HRRNQTQQEVFFYEEYKDeNIPLLKTAEDFYQIGIPWLELSGIALHYDPTLIIKLCRIAKGFL---GKSSERRDLWLDVIRVILLPVYSLVGVNIGLS 599
                 .2344589999*****99758*******************************************...777899************************** PP

     THOC2_N 570 devyeLlklfplekRYslYgewfegltsrlpeikaafakaeketkdiLkrlSkenikqmaR 630
                 +e+y+Ll lf+  +RYslYgew + ++++ pe+k +   +e+etk+iL+rl+k+n+kq +R
  EPX74425.1 600 NELYDLLTLFDPSTRYSLYGEWSSTTIKKYPELKLQLISTERETKGILRRLTKTNVKQTGR 660
                 **********************************************************998 PP

>> Tho2  Transcription factor/nuclear export subunit protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  303.0   2.2   4.8e-94   2.1e-90       1     301 []     973    1274 ..     973    1274 .. 0.94
   2 ?   -5.5   2.1         4   1.8e+04      30      79 ..    1339    1390 ..    1336    1401 .. 0.67
   3 ?   -3.5   5.9         1   4.5e+03      41      79 ..    1545    1588 ..    1471    1595 .. 0.80

  Alignments for each domain:
  == domain 1  score: 303.0 bits;  conditional E-value: 4.8e-94
        Tho2    1 weilspefyvtFWslslyDiyvpkeqYekeieklkseieelakdrsderaaakkkkkekkrlkeliekLeeEkkeqiehvekvkkrLkeekkswfk. 96  
                  we+++p++y  FW+ls+yDiyvp e+Ye e ++  ++ ++++ +++      +k+k+e ++l++l ++L++E+k +i++ e ++k L++++ +wf  
  EPX74425.1  973 WECINPDLYELFWKLSIYDIYVPLERYEYESNRAFEQFRQVEVSGQ----PYSKSKQECQKLTTLSDNLRNELKDHIQSLETTRKDLQSKCTKWFLp 1065
                  899**************************************44444....5899*****************************************98 PP

        Tho2   97 ...ndekkkkeitdallqrcilPRlllsplDAlycakfvkllhelktpnFstldlldrlfkanliplifscTerEaenlgrFlneilkdlkrWhkde 190 
                     ++ + +  +++ ++++ci+PRl + plDAlycakf+kllh+l++pnFst+++l++lf +++ +++f +T rE +n++rFl +il+d++ W+k++
  EPX74425.1 1066 mdtQRLHPRGLASQYFWSYCIAPRLRMGPLDALYCAKFIKLLHSLNAPNFSTISFLNKLFDSHIPSFVFALTPRESDNFSRFLFQILNDVTHWYKEK 1162
                  75433355566999*********************************************************************************** PP

        Tho2  191 eayekeal.kkdlpgfqkklkeegkekelkyeqfrkvlkkwhkkilkalkscleskeymeirNaiivLkkvlevFPavknsgekvlnaveklakqek 286 
                  ++yeke+l +  l gf+ ++ +e+  + l++++f+ ++ kwhk++++ +++cl s+eym+i+Naii+L+k+l++FP++++sg+++++a ++l+++ek
  EPX74425.1 1163 NIYEKECLgNGLLTGFRVDWLDENGPSLLQHNKFVLLVSKWHKQLTQYFEQCLMSGEYMHIYNAIIILEKILPCFPLIQESGQSLKKAADNLKENEK 1259
                  ********555566******555569*********************************************************************** PP

        Tho2  287 reDlkvlansllkll 301 
                  reD+k+la +++++l
  EPX74425.1 1260 REDIKILALGYYAKL 1274
                  ***********9986 PP

  == domain 2  score: -5.5 bits;  conditional E-value: 4
        Tho2   30 eieklkseieel..akdrsde.raaakkkkkekkrlkeliekLeeEkkeqieh 79  
                  ei+++k++ ++   +  ++++ +++ +  + +  +l+++ + L++E +e i++
  EPX74425.1 1339 EIQQMKTATSDNvpS-MEDTNtKQENDTGTVKTPKLTSTEKPLSSESQEGIRS 1390
                  566666655554542.3333336777777888888889999999998887765 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 1
        Tho2   41 l....akdrsde.raaakkkkkekkrlkeliekLeeEkkeqieh 79  
                       +++r+de r++ +++++++++ +++ ++L++E++++ ++
  EPX74425.1 1545 SsglaDENRRDEqRNTGMNRRARQDERRDRDTRLQKERQRERSS 1588
                  023343444444477788888888888999*******9987765 PP

>> Thoc2  Transcription- and export-related complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.2   0.0     4e-31   1.8e-27       1      76 []     662     737 ..     662     737 .. 0.99

  Alignments for each domain:
  == domain 1  score: 95.2 bits;  conditional E-value: 4e-31
       Thoc2   1 laklshsnPlivfevvlsqiesYdnlievvvdalkyltslsyDvLtyclleaLanserervkedglnlskWlqsLa 76 
                 lak++h+ P  vf+++l+qie+Ydnl+ev+vd+++++t+l +DvLt+++l++++n+ ++r+k dg+++++Wlq La
  EPX74425.1 662 LAKVCHNIPYPVFSIALNQIETYDNLVEVIVDSARFMTALDFDVLTFAILSSFSNEMKKRLKPDGTSIAHWLQGLA 737
                 8*************************************************************************98 PP

>> PAM2  Ataxin-2 C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   7.5e-06     0.034       4      15 ..    1322    1333 ..    1321    1334 .. 0.93

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 7.5e-06
                  --SSTTSS---- CS
        PAM2    4 SkLNPnAkEFVP 15  
                  S LN+nA EFVP
  EPX74425.1 1322 SGLNVNASEFVP 1333
                  78********** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1601 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1478  (0.0824363); expected 358.6 (0.02)
Passed bias filter:                      497  (0.0277205); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.11u 0.31s 00:00:01.42 Elapsed: 00:00:00.48
# Mc/sec: 10059.57
//
Query:       EPX74426.1  [L=905]
Description: hamartin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.7e-12   46.2  27.0    3.5e-10   39.3  27.0    3.9  1  Hamartin         Hamartin protein
    0.00012   21.8   3.6    0.00012   21.8   3.6    2.6  2  Lebercilin       Ciliary protein causing Leber congenital ama
  ------ inclusion threshold ------
      0.018   15.3   2.7      0.087   13.1   0.3    3.2  3  Phage_int_SAM_1  Phage integrase, N-terminal SAM-like domain


Domain annotation for each model (and alignments):
>> Hamartin  Hamartin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.3  27.0   5.8e-14   3.5e-10      74     596 ..     198     765 ..     175     871 .. 0.52

  Alignments for each domain:
  == domain 1  score: 39.3 bits;  conditional E-value: 5.8e-14
    Hamartin  74 lkkaatrLqaLtLLghvvrrqPsWlhKiakhpllksLLKlLktekdivvLmtgvLvlitLLpmipqsvkqyLpdlfevFgrLasw.nlknpgkvpev.. 169
                  +++ +r++ L+++  v+rrq + l+ i ++  +  +L  L  +   + L   +  +i++Lp i + ++++L+ lf  F rL+   +l  p k+p+   
  EPX74426.1 198 YSQPRNRIPILSVMVSVARRQGPRLYEIPQTGFFDCVLNSLDYDCSPIALSYSLSFVIMILPHICNDLGNLLYRLFSCFLRLSMIdSLTGPPKAPNTng 296
                 57899******************************************************************************9984444534443333 PP

    Hamartin 170 .........................................ylvHLqaslysLFhrLYGmyPcnfvsYLrshysmkenletFeevik...........P 216
                                                          y   L+   + LF  LY+ +P nf+ +Lr   +   n   F+   +           P
  EPX74426.1 297 wevlpnfastyttssstssspsplsahgkaksnlsdtfhseYFSSLEY--SQLFTFLYALFPINFLEFLRDPTTYAANH-NFTIPHRynsemilskctP 392
                 344444444444444444444444444444444444444334444433..58******************876666665.343333355788889999* PP

    Hamartin 217 mLetVRiHPeLvtgtkdtEl.dptRWKklEthDvVieCakl.sldpkeasceegyssvaadptsspytdlqsstgssts..tpistkr..lqlsslsgt 309
                 +L +   H + ++ t   El d++RWKkl+   +V  C +l ++ ++e + + gy ++     + p  dl   tg  ++  ++ +++   l++s  ++ 
  EPX74426.1 393 LLSNHLAHRNFLSFTASSELsDKSRWKKLDSTTIVALCNRLnTVGMTEGNADLGYHQS-----TRPLEDLGPPTGVLAYpnENHDICTdpLSVSWHQQL 486
                 *******************84578****************967888899988888754.....333444433333333200111222211233322222 PP

    Hamartin 310 spavlsvessrskddeislWSPssvcgmttppsspgivpttelelsssasllsskvsstpeaagkatpetTPa.kssrkl.....ppslsesavvvalp 402
                 s +++  +s   +   ++ + P +v   + ++s+++++    +e s+    + ++v++ +e++   +p+tT +   +++      ++   e++++++  
  EPX74426.1 487 SVPNSINSSFALEPTDMKGSVPAIVDESSENDSQRASI----SEASPYFHGNVKSVPGVSESSEDISPNTTTLiLRLQREllflkNELDFEKYMRQQ-- 579
                 22222222233333333344455444444444444333....3555555555666666666666666664433022222223332111122222211.. PP

    Hamartin 403 assrksspprkdeksesskpdlskqeevenekeleeslkskssvtlseLsdvikelleaesedsvekeeeeaaisqelseiteekketlvsrggldspf 501
                  + ++ s+ r+++        ++ ++  e+e++    ++++  v+   L++ ++++++++++    + + e +++++l++  ee+k     +  l s+ 
  EPX74426.1 580 -HIQNISKLRREH--------VQDMAV-ESERQKLLLTNKRYKVQIDVLTQELEQQRTESQAALNRRFQWETDCNNKLKAFREERKAWKSKEESLSSSL 668
                 .111112222221........111111.22222222222333444444444444443333344444444444444444444444444444444455444 PP

    Hamartin 502 srtleslaksqr.rkrlasalssesisdaegaatkkeaksskeaesslekekscsakqsftpieqklessk..dcpadeeesensleeklltpspckk 596
                  + +++l   +r + ++a    +     ++   +k ++ ++  ++++l+k +++++++s+ +  ++ ++    +  ++e+e++  ++e+l+t+ ++++
  EPX74426.1 669 ASLTNQLKTFERvQTEIAYEKNQL-ELRVQLYKSKVDEFEQNGSSTNLSKRNKEAVNDSINNAAMENSTILsnSLLSEEHEKKMIESEQLCTNLKSEN 765
                 444444444443222222222221.1111111111112223333333333333333333322222211111112222222222222222222222221 PP

>> Lebercilin  Ciliary protein causing Leber congenital amaurosis disease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.4  16.3       2.2   1.3e+04     117     184 ..     613     680 ..     554     708 .. 0.76
   2 !   21.8   3.6     2e-08   0.00012       6     108 ..     751     853 ..     747     859 .. 0.94

  Alignments for each domain:
  == domain 1  score: -4.4 bits;  conditional E-value: 2.2
  Lebercilin 117 aereeLqkkLeeleakleekeekikeLerkleleeksfrrqlaaekkktkeaqeevkalqeeierlkq 184
                    + L+++Le+ +++ +++ ++  + e  ++++ k+fr + +a+k+k+  + +++++l+++++++++
  EPX74426.1 613 VQIDVLTQELEQQRTESQAALNRRFQWETDCNNKLKAFREERKAWKSKEESLSSSLASLTNQLKTFER 680
                 366778888999999988888888889999999999*******************9999999987765 PP

  == domain 2  score: 21.8 bits;  conditional E-value: 2e-08
  Lebercilin   6 lsarllkikeLqnelaelqskleelrkEnklLkrlqkrqekaLskyedteaeLpqllarhneEvrvlrerlRksqekerelekklkekeaellrlkdkl 104
                 + ++++  ++L++e+  lq+k++ l+k++k+L+ ++      L+k  +++a +p++  + n  + ++ +++ + +ek++el kk ++ e++ l  + +l
  EPX74426.1 751 MIESEQLCTNLKSENIHLQNKIDFLTKDLKALNVVCEAKIYDLEKRLSSQATIPEMHGSFNTNIDNYIAQYTDVKEKYDELLKKFRNLESKFLDSQAEL 849
                 556778889*****************************************************************************************9 PP

  Lebercilin 105 kklk 108
                 ++l 
  EPX74426.1 850 EELL 853
                 9885 PP

>> Phage_int_SAM_1  Phage integrase, N-terminal SAM-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.17     1e+03      36      77 ..      37      80 ..      22      85 .. 0.79
   2 ?   13.1   0.3   1.5e-05     0.087      28      61 ..     571     606 ..     567     637 .. 0.91
   3 ?   -2.4   0.0         1   6.2e+03      55      73 ..     653     671 ..     638     713 .. 0.65

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.17
                     .TS--TTT--HHHHHHHHHS-----..-----HHHHHHHHHHHH CS
  Phage_int_SAM_1 36 rgkesleqlttedvraflaeleeeg..lsatslarrlsalrsFf 77
                      + +s ++++ + +r+ l +l e+   ++++ +a+ l+ l++ +
       EPX74426.1 37 LQYPSPNAANSQKIREVLSQLYEKIpfNNSKRRALWLAVLKTVL 80
                     456889999**************889999999999999998765 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 1.5e-05
                      HHHHHHHH.TS--TTT--HHHHHHHHHS-----..- CS
  Phage_int_SAM_1  28 rflkflaergkesleqlttedvraflaeleeeg..l 61 
                      +f+k++++++++++ +l++e+v+++ +e+e+++  l
       EPX74426.1 571 DFEKYMRQQHIQNISKLRREHVQDMAVESERQKllL 606
                      699****************************88543 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 1
                      S----------HHHHHHHH CS
  Phage_int_SAM_1  55 eleeeglsatslarrlsal 73 
                      e+++ + ++ sl+  l++l
       EPX74426.1 653 ERKAWKSKEESLSSSLASL 671
                      4444444444544444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (905 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1550  (0.0864521); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.78u 0.26s 00:00:01.04 Elapsed: 00:00:00.42
# Mc/sec: 6478.26
//
Query:       EPX74427.1  [L=484]
Description: regulator-G-protein signaling Rgs1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-18   66.6   1.1    4.6e-18   65.6   0.3    1.9  2  RGS       Regulator of G protein signaling domain
     0.0061   16.6   0.0     0.0061   16.6   0.0    3.1  5  DEP       Domain found in Dishevelled, Egl-10, and Pleckstrin


Domain annotation for each model (and alignments):
>> RGS  Regulator of G protein signaling domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0      0.81   7.2e+03      62      90 ..     127     155 ..     112     173 .. 0.69
   2 !   65.6   0.3   5.1e-22   4.6e-18       2     113 ..     348     479 ..     347     482 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 0.81
                 STTSSTS-HHHHHHHHHHHCSSSTTTTTT CS
         RGS  62 spkelnidkklreelekrlekeqpsrklf 90 
                 + +e++++ +l + + + +  + +++k+ 
  EPX74427.1 127 CLCEMFLNARLLQVVHNPMARKFTTEKCV 155
                 55777777777777777776664444444 PP

  == domain 2  score: 65.6 bits;  conditional E-value: 5.1e-22
                 HHHHHTSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHTS..........SHHHHHHHHHHHHHHHHTSTTSTTSSTS-HHHHHHHHHHHCSS....... CS
         RGS   2 leslledqpgrslFreFlesefseenlsFwlaveefkka..........keqeelkkkakeIyneylapsspkelnidkklreelekrleke....... 83 
                 les+l+++++  +F eFl+++f++en +F+ +v ef+               +e   +a  Iyn +l+p++p+ +n++ +l e++ ++++ +       
  EPX74427.1 348 LESILKKPSLQTYFFEFLKKNFCDENQQFYSEVCEFNDFfsqasqandiIAVRESFVHACGIYNCFLSPAAPNAVNLPGDLYERISNHMSLAmevepld 446
                 799**********************************999999776555333333445999*****************************999****** PP

                 ...STTTTTTHHHHHHHHHHHHHHHHHHHHTSH CS
         RGS  84 ...qpsrklfeeaqeevfellekdsypkFlkse 113
                    +  +klf eaq+ +++l++ ds  kFl+s+
  EPX74427.1 447 ewlRIVHKLFLEAQALILDLMAGDSLLKFLESQ 479
                 *******************************97 PP

>> DEP  Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1      0.92   8.2e+03       5      19 ..      70      84 ..      68      84 .. 0.84
   2 ?   -0.9   0.0      0.19   1.7e+03      33      58 ..     119     144 ..     111     156 .. 0.73
   3 !   16.6   0.0   6.9e-07    0.0061      18      70 ..     256     311 ..     241     312 .. 0.83
   4 ?   -2.9   0.1      0.84   7.5e+03      58      70 ..     366     377 ..     344     378 .. 0.69
   5 ?   -4.0   0.0       1.8   1.6e+04      10      19 ..     405     414 ..     399     415 .. 0.71

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 0.92
                CEEECTTEEESSE-H CS
         DEP  5 kdrrkhlktypncft 19
                +++r +++t+ +++t
  EPX74427.1 70 SKNRSRFRTIDSSCT 84
                689999***999986 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.19
                 SSSHHHHHHHHHHHHHCTSCECSSSS CS
         DEP  33 iedreeAvalgqlLldqgliehvedk 58 
                 ++  + A  l++++l+ +l++ v + 
  EPX74427.1 119 TVPKKAAKCLCEMFLNARLLQVVHNP 144
                 5556778889*********9999664 PP

  == domain 3  score: 16.6 bits;  conditional E-value: 6.9e-07
                 -HHHHHHHHHHHHTSSSSHHHHHHHHHHHHHCTSCECSSSSHCC....--SSSSS-E CS
         DEP  18 ftGseavdWLldnldiedreeAvalgqlLldqgliehvedkhqe....FrdskqafY 70 
                 + G ++ +WL+++  + d +e v++++ Ll + ++ h ++ +      F+ +  ++Y
  EPX74427.1 256 LFGIDIAEWLMNHTMLLDWNEVVSVANNLLLYSYLSHSQPTNEPysfsFEKG-VSYY 311
                 6799**********************************99998888777766.3444 PP

  == domain 4  score: -2.9 bits;  conditional E-value: 0.84
                 SHCC--SSSSS-E CS
         DEP  58 khqeFrdskqafY 70 
                 k++ F d++q fY
  EPX74427.1 366 KKN-FCDENQQFY 377
                 334.889989998 PP

  == domain 5  score: -4.0 bits;  conditional E-value: 1.8
                 TTEEESSE-H CS
         DEP  10 hlktypncft 19 
                 h   ++ncf+
  EPX74427.1 405 HACGIYNCFL 414
                 5666899996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (484 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       500  (0.0278878); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3354.29
//
Query:       EPX74428.1  [L=176]
Description: U4/U6 X U5 tri-snRNP complex subunit Snu23 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.6e-07   31.4   0.1    1.6e-07   31.4   0.1    1.7  2  zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
    0.00023   21.5   1.1     0.0004   20.7   1.1    1.4  1  zf-met       Zinc-finger of C2H2 type
    0.00025   21.1   0.2    0.00045   20.3   0.2    1.4  1  zf-DBF       DBF zinc finger
  ------ inclusion threshold ------
       0.47   10.5   2.7       0.82    9.8   0.0    2.4  2  SNRNP27      U4/U6.U5 small nuclear ribonucleoproteins


Domain annotation for each model (and alignments):
>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.3       1.2   5.6e+03      19      24 ..       2       7 ..       1       8 [. 0.81
   2 !   31.4   0.1   3.6e-11   1.6e-07       2      26 ..      56      80 ..      55      81 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 1.2
                 CCTTSH CS
  zf-C2H2_jaz 19 nHlkSK 24
                 +H+kS+
   EPX74428.1  2 EHQKSH 7 
                 699997 PP

  == domain 2  score: 31.4 bits;  conditional E-value: 3.6e-11
                 CBBTTTTBBBSSHHHHHCCTTSHHH CS
  zf-C2H2_jaz  2 fYCvlCdKyFksenaldnHlkSKkH 26
                 +YC++C+ ++k++ ++ +Hl+S +H
   EPX74428.1 56 WYCEACNETYKDSLSWVEHLNSTQH 80
                 8************************ PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   1.1   8.9e-08    0.0004       1      25 []      56      80 ..      56      80 .. 0.97

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 8.9e-08
      zf-met  1 fyCelCnvtfnsesqlksHlqGKkH 25
                +yCe+Cn t+++  ++  Hl++ +H
  EPX74428.1 56 WYCEACNETYKDSLSWVEHLNSTQH 80
                9*********************888 PP

>> zf-DBF  DBF zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.2     1e-07   0.00045       5      27 ..      57      82 ..      54      85 .. 0.87

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 1e-07
      zf-DBF  5 YCEnCrvkfedle...eHlksekHrk 27
                YCE C+++++d     eHl+s +H +
  EPX74428.1 57 YCEACNETYKDSLswvEHLNSTQHLR 82
                *********99655779*******75 PP

>> SNRNP27  U4/U6.U5 small nuclear ribonucleoproteins
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   1.4      0.46   2.1e+03      32      46 ..     136     150 ..     122     151 .. 0.80
   2 ?    9.8   0.0   0.00018      0.82       2      19 ..     158     175 ..     157     176 .] 0.90

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.46
     SNRNP27  32 kkkkkrkyRQYMNRk 46 
                 k +k+rk R   NRk
  EPX74428.1 136 KLEKQRKKRELANRK 150
                 678999999999997 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00018
     SNRNP27   2 eeeemmklmGfggFdtTk 19 
                 e+ e+ ++mG+ gF++T 
  EPX74428.1 158 EDSELVQVMGLRGFGSTN 175
                 78999***********95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1586  (0.08846); expected 358.6 (0.02)
Passed bias filter:                      588  (0.032796); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1282.34
//
Query:       EPX74429.1  [L=669]
Description: glutamate-cysteine ligase Gcs1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   2.3e-161  537.2   0.0   3.5e-161  536.6   0.0    1.3  1  GCS        Glutamate-cysteine ligase
  ------ inclusion threshold ------
        0.1   12.8   0.0       0.29   11.4   0.0    1.8  1  RNase_3_N  Ribonuclease III N-terminal domain


Domain annotation for each model (and alignments):
>> GCS  Glutamate-cysteine ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  536.6   0.0  3.9e-165  3.5e-161       1     365 []     298     654 ..     298     654 .. 0.99

  Alignments for each domain:
  == domain 1  score: 536.6 bits;  conditional E-value: 3.9e-165
         GCS   1 iymDamgfGmGsccLQvtfqaknieearllYdqlaplaPillalsaaspiykGlladvdvrwnvisasvDdrteeErgeeplknekkripksrydsvdl 99 
                 iymD+mgfGmG+ccLQ+tfqak+++earllYdql+p++P++la+sa +p+++G+la++d+rwnvi+++vDdrt++E+         +++pksrydsvdl
  EPX74429.1 298 IYMDSMGFGMGCCCLQLTFQAKSCDEARLLYDQLTPITPLMLAISAGTPAFRGYLAEQDCRWNVIAGAVDDRTKSEM---------ETVPKSRYDSVDL 387
                 9***************************************************************************6.........4689********* PP

         GCS 100 ylseekrlreeyndlelpldeevlkklleagvdellakhiahlfirdplvifeekieqddekstdhFeniqstnWqtlrfKpPppesekigWrvefRpm 198
                 y+s++ r+ +eynd++++++e ++++l+++g+de+l++h+ah+f rdplvif+++i+qd+++s+ hFen++stnWq++rfKpPp +s+ igWrvefR+m
  EPX74429.1 388 YISNDPRNLPEYNDVPVVTNEGCYEQLIKGGIDERLSRHMAHIFARDPLVIFSDNIQQDNSTSNGHFENLNSTNWQSMRFKPPPLNSS-IGWRVEFRSM 485
                 ************************************************************************************9888.********** PP

         GCS 199 evqltdfenaafsvfivLltrvilsfklnfyipiskvdenmkrAhkrdavleekfyfrkniakkeeaaekakeieemtideiingk..egefpglipli 295
                 e+q+t+fenaa+svf+v+l+r+ilsf+l+fy+pis vd+nm +A++rda++++kf+fr n ++++ea  ++ +++++t+d+i+ng+  e+ fpgl++++
  EPX74429.1 486 EIQFTEFENAAYSVFVVMLSRAILSFNLDFYMPISLVDKNMVNAQARDAIHRKKFWFRCNPFSDTEAPPERGQFKQLTLDQIFNGEqtEDGFPGLVQIV 584
                 *******************************************************************99****************98899********* PP

         GCS 296 esylesvevdvetrkklekylkliskrasgelltaAkwiRefvakhpdYkkdSvvsdeinydLlkkveki 365
                 +syl +++ d+et ++l++yl+l+skrasge+lt A+wiR+f+++hp Yk+dSvvs ein+dL+k++++i
  EPX74429.1 585 RSYLYTCNPDAETLCSLDRYLRLVSKRASGECLTEASWIRNFITTHPLYKQDSVVSPEINFDLIKRITSI 654
                 *****************************************************************99876 PP

>> RNase_3_N  Ribonuclease III N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   3.2e-05      0.29      69     104 ..      69     104 ..      63     106 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 3.2e-05
                 TT--THHHHHHHHHHH--TT--S-SSTTSHHHHHHH CS
   RNase_3_N  69 lgklplleeisnyeskfkssdskPilselekedlek 104
                 l ++++l+ + +ye++fk+ d +Pi   l++++  k
  EPX74429.1  69 LRQEQILKALGDYEERFKHVDFSPIYAALKNTNCSK 104
                 67899*************************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (669 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       503  (0.0280551); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.28s 00:00:00.91 Elapsed: 00:00:00.47
# Mc/sec: 4235.77
//
Query:       EPX74430.1  [L=650]
Description: MBF transcription factor complex subunit Res2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.2e-17   62.0   0.0    2.7e-07   31.1   0.0    3.3  3  Ank_2      Ankyrin repeats (3 copies)
    3.1e-15   56.3   3.1    1.2e-07   32.1   0.2    5.0  5  Ank_4      Ankyrin repeats (many copies)
    6.9e-14   50.6   0.4    1.4e-05   25.1   0.1    4.5  5  Ank_3      Ankyrin repeat
    2.7e-12   46.7   0.6    3.1e-05   24.2   0.0    3.2  3  Ank_5      Ankyrin repeats (many copies)
    4.7e-11   42.6   1.3    0.00013   22.3   0.1    4.1  4  Ank        Ankyrin repeat
      7e-05   22.6   0.2    0.00069   19.4   0.2    2.3  1  KilA-N     KilA-N domain
  ------ inclusion threshold ------
      0.045   13.3   0.2       0.13   11.8   0.2    1.8  1  AHJR-like  REase_AHJR-like


Domain annotation for each model (and alignments):
>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.38   9.8e+02      55      73 ..       6      23 ..       3      38 .. 0.60
   2 !   31.1   0.0   1.1e-10   2.7e-07      23      68 ..     240     296 ..     210     300 .. 0.77
   3 !   25.8   0.0   4.7e-09   1.2e-05      19      81 ..     310     396 ..     297     398 .. 0.72

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.38
       Ank_2 55 tpLhyAarsghleivklLl 73
                t+ h+A+ sg  e+ + ++
  EPX74430.1  6 TAVHIAVYSGV-EVYECFI 23
                56666665553.5554444 PP

  == domain 2  score: 31.1 bits;  conditional E-value: 1.1e-10
       Ank_2  23 n...k.ngktaLhyAakngnleivklLleh......adndgrtpLhyAars.ghlei 68 
                 n   + +g+t Lh+A++ g++e++klLl +       ++  +tpL+ ++ + +++++
  EPX74430.1 240 NsviDdDGHTSLHWACSMGHIEMIKLLLRAnadigvCNRLSQTPLMRSVIFtNNYDC 296
                 34432599********************86656665557899*****9999767776 PP

  == domain 3  score: 25.8 bits;  conditional E-value: 4.7e-09
       Ank_2  19 gadpnkngktaLhyAakngnl....eivklLle....h................adndgrtpLhyAarsghleivklLlekgadinl 81 
                  + ++++g+++Lh+ ++++++    +++k+ l+    +                +d++g t+L +Aar+g +e+v+ Ll ++a++ +
  EPX74430.1 310 IYAVDSCGQSILHHVVRSTSTpskvNAAKYYLDsvleKlvliqpfenvvrlvnlQDSSGDTALLIAARNGATECVNSLLSYNANPSI 396
                 34455589*********97553323678999985554156666767787775555599*********************88898865 PP

>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.29   7.5e+02      37      46 ..       6      15 ..       4      23 .. 0.84
   2 !   32.1   0.2   4.8e-11   1.2e-07       2      50 ..     248     296 ..     247     299 .. 0.90
   3 ?    4.4   0.0     0.024        61      27      44 ..     310     326 ..     299     339 .. 0.81
   4 !   14.7   0.0   1.4e-05     0.035      27      51 ..     361     384 ..     332     388 .. 0.78
   5 !   10.1   0.0   0.00037      0.96       2      38 ..     369     404 ..     368     404 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.29
       Ank_4 37 talhiAakrg 46
                ta+hiA++ g
  EPX74430.1  6 TAVHIAVYSG 15
                8999999987 PP

  == domain 2  score: 32.1 bits;  conditional E-value: 4.8e-11
       Ank_4   2 ltaLhyaaisgrlelvrlLlekgadinaqdnrsGetalhiAa.krgnvei 50 
                 +t Lh+a+++g++e+++lLl  +adi  + nr  +t+l + +  ++n+++
  EPX74430.1 248 HTSLHWACSMGHIEMIKLLLRANADIGVC-NRLSQTPLMRSViFTNNYDC 296
                 689*****************99******9.**********7746668887 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.024
       Ank_4  27 inaqdnrsGetalhiAak 44 
                 i+a+ +++G++ lh++++
  EPX74430.1 310 IYAV-DSCGQSILHHVVR 326
                 8999.**********996 PP

  == domain 4  score: 14.7 bits;  conditional E-value: 1.4e-05
       Ank_4  27 inaqdnrsGetalhiAakrgnveil 51 
                 +n q ++sG+tal iAa++g  e++
  EPX74430.1 361 VNLQ-DSSGDTALLIAARNGATECV 384
                 7899.****************9998 PP

  == domain 5  score: 10.1 bits;  conditional E-value: 0.00037
       Ank_4   2 ltaLhyaaisgrlelvrlLlekgadinaqdnrsGeta 38 
                  taL  aa  g +e+v +Ll+++a++    nr+ +ta
  EPX74430.1 369 DTALLIAARNGATECVNSLLSYNANPSIP-NRQRRTA 404
                 58999999999999999999999998887.8877775 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       6.8   1.7e+04       4      13 ..       6      15 ..       5      17 .. 0.86
   2 !   25.1   0.1   5.5e-09   1.4e-05       1      29 [.     246     273 ..     246     275 .. 0.93
   3 ?   -1.9   0.0       3.4   8.6e+03       3      14 ..     281     292 ..     280     302 .. 0.78
   4 !    6.7   0.0    0.0051        13       1      16 [.     316     331 ..     316     344 .. 0.74
   5 !   13.2   0.0   3.9e-05     0.099       2      30 ..     368     395 ..     367     396 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 6.8
       Ank_3  4 tpLhlAarsg 13
                t+ h+A+ sg
  EPX74430.1  6 TAVHIAVYSG 15
                899***9987 PP

  == domain 2  score: 25.1 bits;  conditional E-value: 5.5e-09
       Ank_3   1 nGetpLhlAarsgnleivkfLlenkgadv 29 
                 +G t Lh+A++ g++e++k+Ll+  +ad+
  EPX74430.1 246 DGHTSLHWACSMGHIEMIKLLLR-ANADI 273
                 699********************.89998 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 3.4
       Ank_3   3 etpLhlAarsgn 14 
                 +tpL++ + ++n
  EPX74430.1 281 QTPLMRSVIFTN 292
                 79***7776554 PP

  == domain 4  score: 6.7 bits;  conditional E-value: 0.0051
       Ank_3   1 nGetpLhlAarsgnle 16 
                 +G+++Lh+++rs++++
  EPX74430.1 316 CGQSILHHVVRSTSTP 331
                 69**********9984 PP

  == domain 5  score: 13.2 bits;  conditional E-value: 3.9e-05
       Ank_3   2 GetpLhlAarsgnleivkfLlenkgadvn 30 
                 G t+L +Aar+g +e v  Ll  ++a++ 
  EPX74430.1 368 GDTALLIAARNGATECVNSLLS-YNANPS 395
                 89********************.999986 PP

>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.0   1.2e-08   3.1e-05       8      53 ..     241     284 ..     236     285 .. 0.88
   2 ?   -2.6   0.0         3   7.6e+03      12      23 ..     313     324 ..     310     326 .. 0.74
   3 !   19.4   0.1   3.9e-07   0.00099       8      54 ..     360     406 ..     355     408 .. 0.90

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 1.2e-08
       Ank_5   8 dvnrldgggntpLhvAakygaadvvrlLlargadlnltdsrGltal 53 
                 +v + dg+  t Lh+A++ g+ ++++lLl  +ad+++++   +t+l
  EPX74430.1 241 SVIDDDGH--TSLHWACSMGHIEMIKLLLRANADIGVCNRLSQTPL 284
                 55566666..*****************************9999997 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 3
       Ank_5  12 ldgggntpLhvA 23 
                  d +g+++Lh+ 
  EPX74430.1 313 VDSCGQSILHHV 324
                 578888999976 PP

  == domain 3  score: 19.4 bits;  conditional E-value: 3.9e-07
       Ank_5   8 dvnrldgggntpLhvAakygaadvvrlLlargadlnltdsrGltald 54 
                  vn +d  g t+L +Aa++ga ++v+ Ll ++a++ + + + +ta +
  EPX74430.1 360 LVNLQDSSGDTALLIAARNGATECVNSLLSYNANPSIPNRQRRTASE 406
                 6899999999***************************9999999855 PP

>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       2.1   5.4e+03       4      15 ..       6      16 ..       5      30 .. 0.71
   2 !   22.3   0.1     5e-08   0.00013       1      27 [.     246     273 ..     246     278 .. 0.85
   3 ?    1.2   0.0      0.23   5.8e+02       4      22 ..     282     306 ..     281     325 .. 0.70
   4 !   14.6   0.1   1.3e-05     0.034       2      31 ..     368     398 ..     367     399 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 2.1
                BHHHHHHHHTTH CS
         Ank  4 TPLHlAatngkk 15
                T+ H+A+ + ++
  EPX74430.1  6 TAVHIAV-YSGV 16
                999**99.4444 PP

  == domain 2  score: 22.3 bits;  conditional E-value: 5e-08
                 TSBBHHHHHHHHTTHHHHHHHH.TTTST CS
         Ank   1 dGnTPLHlAatngkkriiklLL.hGAnl 27 
                 dG+T LH+A++ g+ ++iklLL   A++
  EPX74430.1 246 DGHTSLHWACSMGHIEMIKLLLrANADI 273
                 8*********************434655 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.23
                 BHHHHHH..HHTT.....HHHHHHHH CS
         Ank   4 TPLHlAa..tngk.....kriiklLL 22 
                 TPL++ +  tn+       +++ l L
  EPX74430.1 282 TPLMRSVifTNNYdcqtfQQVLDL-L 306
                 9***97688555466776666664.3 PP

  == domain 4  score: 14.6 bits;  conditional E-value: 1.3e-05
                 SBBHHHHHHHHTTHHHHHHHH.TTTSTTCBT CS
         Ank   2 GnTPLHlAatngkkriiklLL.hGAnlnald 31 
                 G+T+L +Aa+ng ++++  LL + An+ + +
  EPX74430.1 368 GDTALLIAARNGATECVNSLLsYNANPSIPN 398
                 9********************778**98866 PP

>> KilA-N  KilA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.2   2.7e-07   0.00069       7      91 ..      26      90 ..      21      97 .. 0.76

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 2.7e-07
      KilA-N  7 eiiirrvkdgyinatkllkaaaedtkriddWlrnkstkelleeleedynisekkksektisenrkakpgrlqGtYvhpdlalava 91
                  ++rr++d + nat++lk a        d+ + + t+ l +e++  +            +e  ++ +g++qGt+v+++  +++a
  EPX74430.1 26 VSVMRRRRDSWLNATQILKVA--------DFDKPQRTRVLEKEVQIGT------------HEKVQGGYGKYQGTWVPYERGVDLA 90
                45789989*************........3446677777777777542............2344677899********9999888 PP

>> AHJR-like  REase_AHJR-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.2   5.2e-05      0.13       6      47 ..     196     237 ..     192     242 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 5.2e-05
   AHJR-like   6 selererleslaeqyrekGyevllhPnredlPdfLksYrpDl 47 
                 +e e   l+s  ++y+e    ++lhP++  +P fL s  pD 
  EPX74430.1 196 KEEESSMLDSSLDKYEESLLDFFLHPEEARIPSFLYSPPPDF 237
                 567888999**************************9988886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (650 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       880  (0.0490825); expected 358.6 (0.02)
Passed bias filter:                      558  (0.0311228); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.67u 0.28s 00:00:00.95 Elapsed: 00:00:00.45
# Mc/sec: 4377.47
//
Query:       EPX74431.1  [L=478]
Description: ATP-dependent RNA helicase Rok1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.4e-39  133.0   0.0    1.8e-38  132.0   0.0    1.5  1  DEAD        DEAD/DEAH box helicase
      2e-36  124.7   0.7      2e-31  108.6   0.1    2.8  3  Helicase_C  Helicase conserved C-terminal domain
      2e-12   47.5   0.1    6.4e-12   45.8   0.0    1.9  2  ResIII      Type III restriction enzyme, res subunit
    5.6e-08   31.9   0.0    1.3e-07   30.7   0.0    1.6  2  SNF2_N      SNF2 family N-terminal domain
     0.0035   17.1   0.0     0.0082   15.8   0.0    1.5  1  SWI2_SNF2   SWI2/SNF2 ATPase
  ------ inclusion threshold ------
      0.023   15.0   0.6       0.19   12.0   0.6    2.4  1  AAA_22      AAA domain


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.0   0.0   6.1e-42   1.8e-38       2     176 .]      71     238 ..      70     238 .. 0.91

  Alignments for each domain:
  == domain 1  score: 132.0 bits;  conditional E-value: 6.1e-42
                 HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEE.EEETTSSHHHHHHHHHTTCS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxx RF
        DEAD   2 diQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvl.liiggvaardqlskldngvd 99 
                 +iQ+ +ip++  ++d+l++a+TGsGKT a+l+p+l ++ + + + g +ali++Pt+ L+eq+++++k+++ + ++ v  l  ++++ +++  +l++++d
  EPX74431.1  71 AIQRYSIPILSMKRDLLACAPTGSGKTIAYLFPILYSLQS-HVEGGYRALIIAPTKDLCEQIYKQAKRLTTNSSIHVTeLNKSNEKIQEKSPQLREKYD 168
                 79*********************************99976.99****************************98877774566788889999999999** PP

                 EEEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 100 ivvgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkdvkkl 176
                 i ++tp rl++ l+   l+l++v+++V+DEadrl ++gf ++ ++il+++       + +    ++SATlp++v++l
  EPX74431.1 169 ICISTPMRLIHALR-SGLKLDKVEYIVMDEADRLFEEGFVEQTDEILSACT------HPKVCKSLFSATLPSTVEEL 238
                 **********9884.6779*******************************3......2334588********99986 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.0   1.9e-05     0.056       6      92 ..     105     197 ..      97     213 .. 0.72
   2 ?   -3.0   0.0       3.2   9.5e+03      60      81 ..     240     261 ..     223     263 .. 0.63
   3 !  108.6   0.1   6.8e-35     2e-31       2     111 .]     273     382 ..     272     382 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1.9e-05
                 HHHHHHHTTTTSEEEEEESSHHHHHHHHHHHHHT..TSTEEEESTTSTHHHHHHHHHHHH.TTSSSEEEESGG.....GTSSSTSTTESEEEESS CS
  Helicase_C   6 llellkleeeggkilifvntidrlekvklllekk..gikvavlhgelpqnereeileqfn.kgesdvLiatdv.....aerGidipkvnlVinfd 92 
                 l+ l ++ e g+++li+++t+d +e  ++ ++ k    ++ ++  el++++ +   ++ + ++++d+ i+t +     +  G+ ++kv+++++ +
  EPX74431.1 105 LYSLQSHVEGGYRALIIAPTKDLCE--QIYKQAKrlTTNSSIHVTELNKSNEKIQEKSPQlREKYDICISTPMrlihaLRSGLKLDKVEYIVMDE 197
                 44444788999***********997..4443333334444444445555554444444446789*******988888899999999999998755 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 3.2
                 HHHHTTSSSEEEESGGGTSSST CS
  Helicase_C  60 eqfnkgesdvLiatdvaerGid 81 
                 +   ++  +v+i t++ ++ id
  EPX74431.1 240 QTIARDPLRVIIGTKDTSKTID 261
                 3444455667777777777766 PP

  == domain 3  score: 108.6 bits;  conditional E-value: 6.8e-35
                 HHHHHHHHHHHTTTTSEEEEEESSHHHHHH..HHHHHHHT.TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSH CS
  Helicase_C   2 kleallellkleeeggkilifvntidrlek..vklllekk.gikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnv 97 
                 k+ ++ +++ + e++ +++ifv+ i+r++   ++l+   + +i++ v+hgelp  +ree+l++f++g++ vLiatd ++rGid+ +v++Vinfd+p++v
  EPX74431.1 273 KIVIFRQMIANGEIKPRVVIFVQDIERAKAlyAELM---FdEIHAGVIHGELPEVKREEVLNKFRHGDIWVLIATDLLARGIDFHGVKMVINFDFPQSV 368
                 67778888888999*************974543443...369********************************************************* PP

                 HHHHHHHTTSSSTT CS
  Helicase_C  98 tsyiqriGRtgRag 111
                 +syi+riGRtgRag
  EPX74431.1 369 HSYIHRIGRTGRAG 382
                 ************97 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.8   0.0   2.2e-15   6.4e-12      24     169 ..      83     231 ..      54     233 .. 0.79
   2 ?   -2.8   0.0       1.8   5.4e+03     136     156 ..     307     332 ..     269     339 .. 0.66

  Alignments for each domain:
  == domain 1  score: 45.8 bits;  conditional E-value: 2.2e-15
                 TSEEEEEESTTSTHHHHHHHHHHHH-S.......-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--.........-SEEEEEHHHHHHTH CS
      ResIII  24 dkrglikmaTGtGKTlvaaklierllkkgkee..kflflvprkslleqtleefkkflseaykeigkkvsgdkkka..kekdstnkkilvttiqsldads 118
                 ++ +l  ++TG+GKT+ ++  i + l+++ e   ++l+++p+k+l+eq +++ k+++ +    +++  ++++k++  + + +++ +i+++t  +l  ++
  EPX74431.1  83 KRDLLACAPTGSGKTIAYLFPILYSLQSHVEGgyRALIIAPTKDLCEQIYKQAKRLTTNSSIHVTELNKSNEKIQekSPQLREKYDICISTPMRLIHAL 181
                 56778889**********9999988888666699************************99877666666666666666677899*************** PP

                 ........HHHTTT-SEEEEETGGGTTS....TTTHHHHHT---..SEEEEEESS- CS
      ResIII 119 eeeeeeseellrdrfdviiiDEaHrlgak...kswreilekfke..avllglTATp 169
                       +  l+ d+ ++i++DEa rl ++   ++  eil ++ +   ++  ++AT+
  EPX74431.1 182 ------RSGLKLDKVEYIVMDEADRLFEEgfvEQTDEILSACTHpkVCKSLFSATL 231
                 ......8899999***************7444355556555544334444466665 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.8
                 EEEETGGGTTS.T.....TTHHHHHT CS
      ResIII 136 iiiDEaHrlgakk.....swreilek 156
                 + +DE H           + +e+l+k
  EPX74431.1 307 LMFDEIHAGVIHGelpevKREEVLNK 332
                 67888887766413333444445555 PP

>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.7   0.0   4.3e-11   1.3e-07      61     192 ..      89     204 ..       4     224 .. 0.82
   2 ?   -2.2   0.0      0.42   1.3e+03     271     288 ..     426     442 ..     317     474 .. 0.59

  Alignments for each domain:
  == domain 1  score: 30.7 bits;  conditional E-value: 4.3e-11
                 ---TTS--HHHHHHHHH...HHTTTS---.......S-EEEE--H.HHHHHHHHHHHHH-TTS-EEE--SSHHHH-----------------EEEE-HH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  61 aDemGLGKTvqvlalilaqrakeekdkekkrkdtlagptLivvPa.slldqWeneierhvsssalrvlvyggqkkmkkkntkvapklladydvvittYd 158
                 +  +G GKT+  l  il   +  +++       +    +Li++P+ +l++q +++ +r + +s+++v   ++++   +k ++ +p+l ++yd++i t  
  EPX74431.1  89 CAPTGSGKTIAYLFPIL---YSLQSHV------EGGYRALIIAPTkDLCEQIYKQAKRLTTNSSIHVTELNKSN---EKIQEKSPQLREKYDICISTPM 175
                 55678899999999999...4222222......334448******9*******************998888875...666789**************** PP

                 HHHHHT......TTS-S-S-SEEEES-GGGT--T CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 159 vlsreaelqkkrsvlkqvewkrvvlDEghtlkns 192
                 +l         rs lk  + +++v+DE+ +l  +
  EPX74431.1 176 RLIHAL-----RSGLKLDKVEYIVMDEADRLFEE 204
                 ***555.....9****************998655 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.42
                 --GGGT--S---EEEEEE CS
                 xxxxxxxxxxxxxxxxxx RF
      SNF2_N 271 rakkdveknlPpkteeii 288
                 ++kk++ k+ Ppk ++i+
  EPX74431.1 426 ETKKKL-KKSPPKRKKIT 442
                 344444.33344444444 PP

>> SWI2_SNF2  SWI2/SNF2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   2.7e-06    0.0082      27     145 ..      92     214 ..      87     219 .. 0.68

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 2.7e-06
   SWI2_SNF2  27 qGSGKsltmvflakklle.eelknpkvvvvtDRkdLdkQlsktfakageekpkqaesrkeLkelle......kesekiifttiqKfeeeekeklevlse 118
                 +GSGK++  +f     l+ +    ++ +++   kdL +Q++k++++++++++ ++++ ++ +e+++      +e+ +i+++t  ++ ++ +   + l+ 
  EPX74431.1  92 TGSGKTIAYLFPILYSLQsHVEGGYRALIIAPTKDLCEQIYKQAKRLTTNSSIHVTELNKSNEKIQekspqlREKYDICISTPMRLIHALR---SGLKL 187
                 8*******9998777666356799**********************865555444444444444431111124577777777777754433...33444 PP

   SWI2_SNF2 119 reniivlvDEaHRsqygelakklrkal 145
                 ++  ++++DEa R  ++++ ++  ++l
  EPX74431.1 188 DKVEYIVMDEADRLFEEGFVEQTDEIL 214
                 444577889999988877777766666 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.6   6.3e-05      0.19       9     106 ..      87     208 ..      82     230 .. 0.54

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 6.3e-05
      AAA_22   9 vvtGesGtGKTtllrr.lleqldeeakaee........................erpevvfvtlpsst..sskdllrellralglelkaerlsseelle 80 
                 + ++++G+GKT  +   +l++l+  ++ e                            + ++vt  +++  + ++   +l ++++  + +   +  +l++
  EPX74431.1  87 LACAPTGSGKTIAYLFpILYSLQ--SHVEGgyraliiaptkdlceqiykqakrlTTNSSIHVTELNKSneKIQEKSPQLREKYDI-CIS---TPMRLIH 179
                 67999999999998763344443..333335577788887744444444333331112222222222223333334444444442.333...5555555 PP

      AAA_22  81 aleqalraravielliiDEaqhlr.s...e 106
                 al+  l+  +v e ++ DEa++l+ +   e
  EPX74431.1 180 ALRSGLKLDKV-EYIVMDEADRLFeEgfvE 208
                 55555555555.**********98523422 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (478 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1147  (0.0639746); expected 358.6 (0.02)
Passed bias filter:                      590  (0.0329076); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.63u 0.29s 00:00:00.92 Elapsed: 00:00:00.46
# Mc/sec: 3099.46
//
Query:       EPX74432.1  [L=119]
Description: F0-ATPase subunit G [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-12   46.9   1.3    4.2e-07   30.7   0.2    2.3  2  ATP-synt_G  Mitochondrial ATP synthase g subunit


Domain annotation for each model (and alignments):
>> ATP-synt_G  Mitochondrial ATP synthase g subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   1.4e-06     0.025       4      34 ..      42      72 ..      39      82 .. 0.88
   2 !   30.7   0.2   2.4e-11   4.2e-07      63      99 ..      81     117 ..      74     118 .. 0.92

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.4e-06
  ATP-synt_G  4 eslvpkavyyskvglelskqvakkeklapPt 34
                 ++ ++a+y++ vg el +q+++++k+a+P+
  EPX74432.1 42 AGAFEPATYWATVGKELIQQIYHSQKMANPS 72
                5678899***********************8 PP

  == domain 2  score: 30.7 bits;  conditional E-value: 2.4e-11
  ATP-synt_G  63 lknlkkeeallagvvaaevlgfFsvGEiIGRrklvGY 99 
                 +k+ ++e+++ +  +++e+lg F+vG +IGRrk++ Y
  EPX74432.1  81 WKSQSSETWGRNFYLGVELLGIFCVGQMIGRRKVTAY 117
                 67788999***************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       427  (0.0238162); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.29s 00:00:00.71 Elapsed: 00:00:00.44
# Mc/sec: 805.91
//
Query:       EPX74433.1  [L=119]
Description: GatB/YqeY domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.9e-20   71.8   5.3    6.8e-20   71.6   5.3    1.0  1  YqeY      Yqey-like protein
     0.0096   15.9   4.8       0.02   14.9   0.3    2.6  3  Pox_A3L   Poxvirus A3L Protein
  ------ inclusion threshold ------
      0.037   14.0   1.0       0.73    9.8   0.1    2.3  2  TBPIP     TBPIP/Hop2 winged helix domain
      0.059   13.2   0.1      0.072   12.9   0.1    1.1  1  BSP       Peptidase of plants and bacteria


Domain annotation for each model (and alignments):
>> YqeY  Yqey-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.6   5.3   1.5e-23   6.8e-20       2      90 ..      30     118 ..      29     119 .] 0.97

  Alignments for each domain:
  == domain 1  score: 71.6 bits;  conditional E-value: 1.5e-23
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHTTSS--HHHHHHHHHHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHHGGGS--- CS
        YqeY   2 eklkedlkeamkakdkerlstlrllkaaikqeevderkelsdeevlkvlakevkqRresieefekagRedlaekekaEievleeYlPeq 90 
                 ++++++l e+m++kdk+++st++l +++i+ ++ ++r   +d ev+++l+k +k+++++ie+f +a+R+dl +kek+E+++l+++lP++
  EPX74433.1  30 SEIRKKLMESMRNKDKKQTSTIKLFLSEIEIANKSSRPVTNDSEVIRLLNKSIKKKKQAIEQFLSANRTDLSDKEKDEVAILQNFLPRE 118
                 6899***********************************************************************************85 PP

>> Pox_A3L  Poxvirus A3L Protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.3     0.034   1.5e+02      18      50 ..      23      57 ..      11      66 .. 0.67
   2 !   14.9   0.3   4.5e-06      0.02      23      53 ..      68      98 ..      61     104 .. 0.92
   3 ?   -1.4   0.0      0.55   2.5e+03      38      48 ..     105     115 ..      99     117 .. 0.73

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.034
     Pox_A3L 18 nlveylkeD..retikmilesqpkklkilkeFLaa 50
                n++  l++   ++ +  + +++ k+ +++k FL+ 
  EPX74433.1 23 NVMPALQSEirKKLMESMRNKDKKQTSTIKLFLSE 57
                55555554422344566667777788889999875 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 4.5e-06
     Pox_A3L 23 lkeDretikmilesqpkklkilkeFLaavrn 53
                +++D+e i+++ +s  kk++++ +FL+a r+
  EPX74433.1 68 VTNDSEVIRLLNKSIKKKKQAIEQFLSANRT 98
                689*************************997 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 0.55
     Pox_A3L  38 pkklkilkeFL 48 
                    + il++FL
  EPX74433.1 105 KDEVAILQNFL 115
                 45678999998 PP

>> TBPIP  TBPIP/Hop2 winged helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.1   0.00016      0.73      10      46 ..      12      44 ..       6      51 .. 0.80
   2 ?    2.8   0.1     0.026   1.2e+02      11      33 ..      62      85 ..      58      99 .. 0.69

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00016
       TBPIP 10 lqeqnrPfsvqdvvanlqkklgKtavqkaLdeLvdeg 46
                ++ q+r  ++++v+ +lq+++ K    k ++++++++
  EPX74433.1 12 MRFQYRCIATNNVMPALQSEIRK----KLMESMRNKD 44
                889******************99....4555555555 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.026
       TBPIP 11 qeqnrP.fsvqdvvanlqkklgKt 33
                +++ rP ++ ++v+  l k ++K+
  EPX74433.1 62 NKSSRPvTNDSEVIRLLNKSIKKK 85
                677788447899999999977664 PP

>> BSP  Peptidase of plants and bacteria
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   1.6e-05     0.072      26      91 ..      21      88 ..      12      98 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.6e-05
         BSP 26 aesvlsdasrkvlklLyks..pserippvrsVtlllrdidgvaytsG.ldddhkeIhlslsyiekasae 91
                 ++v+    +++ k L +s   +++ +++ ++ l+l +i+     s  +++d+++I+l  + i+k++++
  EPX74433.1 21 TNNVMPALQSEIRKKLMESmrNKDK-KQTSTIKLFLSEIEIANKSSRpVTNDSEVIRLLNKSIKKKKQA 88
                5677778889999999999756666.*************976655559****************98865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1929  (0.107591); expected 358.6 (0.02)
Passed bias filter:                      660  (0.0368119); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 859.88
//
Query:       EPX74434.1  [L=1042]
Description: lon protease Lon1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      1e-60  204.8   0.0    2.1e-60  203.8   0.0    1.5  1  Lon_C           Lon protease (S16) C-terminal proteolytic dom
    1.2e-35  123.2   0.7    1.2e-35  123.2   0.7    2.1  1  LON_substr_bdg  ATP-dependent protease La (LON) substrate-bin
    8.6e-24   84.5   0.3    2.5e-23   83.0   0.0    1.9  1  AAA             ATPase family associated with various cellula
    6.3e-10   39.2   0.0    2.3e-09   37.3   0.0    2.0  2  AAA_5           AAA domain (dynein-related subfamily)
    1.5e-06   28.4   0.0      7e-06   26.3   0.0    2.1  1  AAA_2           AAA domain (Cdc48 subfamily)
      1e-05   25.4   0.0    2.6e-05   24.1   0.0    1.7  1  ChlI            Subunit ChlI of Mg-chelatase
    0.00029   20.6   0.1     0.0029   17.4   0.0    2.6  2  RuvB_N          Holliday junction DNA helicase RuvB P-loop do
    0.00036   21.1   0.0     0.0015   19.1   0.0    2.1  1  AAA_18          AAA domain
    0.00071   19.9   0.1    0.00071   19.9   0.1    3.3  3  AAA_22          AAA domain
    0.00086   19.7   1.9      0.002   18.6   0.2    2.4  2  AAA_16          AAA ATPase domain
     0.0009   18.2   0.0     0.0017   17.4   0.0    1.3  1  AAA_PrkA        PrkA AAA domain
     0.0014   18.7   0.1      0.011   15.8   0.0    2.6  2  AAA_14          AAA domain
     0.0017   18.7   0.0     0.0045   17.4   0.0    1.8  1  RNA_helicase    RNA helicase
  ------ inclusion threshold ------
       0.01   15.6   0.0      0.023   14.4   0.0    1.5  1  AAA_30          AAA domain
      0.015   15.0   0.0      0.036   13.8   0.0    1.6  1  IstB_IS21       IstB-like ATP binding protein
      0.024   14.5   0.0      0.061   13.2   0.0    1.7  1  AAA_3           ATPase family associated with various cellula
      0.026   14.3   0.1       0.15   11.8   0.0    2.3  2  AAA_24          AAA domain
      0.031   14.2   0.9        1.1    9.1   0.1    3.0  3  NTPase_1        NTPase
      0.045   13.6   0.0       0.15   12.0   0.0    1.8  1  RsgA_GTPase     RsgA GTPase
       0.11   12.3   0.1       0.72    9.7   0.1    2.2  1  NACHT           NACHT domain
       0.13   12.4   2.1       0.13   12.3   0.0    2.2  1  SKI             Shikimate kinase
       0.46   10.8   2.2        1.3    9.3   0.5    2.5  2  AAA_19          AAA domain
        9.3    6.1   8.9        4.1    7.2   0.0    3.3  3  ATPase_2        ATPase domain predominantly from Archaea


Domain annotation for each model (and alignments):
>> Lon_C  Lon protease (S16) C-terminal proteolytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  203.8   0.0   2.7e-63   2.1e-60       2     203 ..     813    1019 ..     812    1021 .. 0.95

  Alignments for each domain:
  == domain 1  score: 203.8 bits;  conditional E-value: 2.7e-63
                  E-TTTTHHHH-S-SS--SSSSS--BSSEEEEEEEETTEEEEEEEEEEEES.....S-S-EEEEES--HHHHHHHHHHHHHHTSS-GGGSS-SS-TTT CS
       Lon_C    2 vtakeleellGkkrfrseeaekedqvGvvtGlawtevGGdlltieavllp.....gkgklkltGklgdvmkesaqaalsyvrsraeelgidkevfek 93  
                  +++k+l ++lG ++++s +   +   Gvv+Glawt +GG  l++e+ + +        +l+ tG+lgdvmkes + ++s+ +s  ++   ++++fe+
  EPX74434.1  813 IDEKDLIDYLGPPIHTSPRLYDRTPNGVVMGLAWTPMGGVPLYVETIVKNilsaaSAPSLERTGQLGDVMKESSELSYSFCKSFLSKNFPNNKFFEH 909 
                  899******************************************97644222225679************************************** PP

                  -EEEEEE-S-B-GGGGGGGHHHHHHHHHHHHTS--B-TTBEE--EE-TT-BEE--S-HHHHHHHHHHTT-SBEEEEGGGGGGTTTS-HHHHTS-B-- CS
       Lon_C   94 kdihihvPeGavPkdGPsaGvtlatalvslltgkkvrkdvamtGeitLrGrvlpiGGlkekllaakragikkvilPkenekdlediPeevreeleii 190 
                  +++h+h PeG++ kdGPsaG+t+at+l+sl   ++v +  amtGe+tL+G+vl iGGl+ek +aak +gi+++++Pk n  d e++P++v+e+l+ +
  EPX74434.1  910 ARLHMHCPEGSISKDGPSAGITMATSLLSLALSMPVPATTAMTGELTLTGKVLRIGGLREKAVAAKLSGINEILFPKGNIADWEQLPDYVKEGLTGV 1006
                  ************************************************************************************************* PP

                  EESBHHHHHHHHB CS
       Lon_C  191 lveevdevlkaal 203 
                  +ve++d+v+k+++
  EPX74434.1 1007 PVEWYDDVFKKIF 1019
                  *********9875 PP

>> LON_substr_bdg  ATP-dependent protease La (LON) substrate-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.2   0.7   1.6e-38   1.2e-35       2     208 .]     154     403 ..     153     403 .. 0.80

  Alignments for each domain:
  == domain 1  score: 123.2 bits;  conditional E-value: 1.6e-38
  LON_substr_bdg   2 lpllpldnkvlfPgitlpltvsrpksiaaierlldkdkpyigvflvkesqkdaide.esiselysvGtvarIvqil.rlddgr..ikvvlegleR 92 
                     l +lp+ +++lfPg++  +  ++p++ +ai++l++k++pyig fl+ + +++++d  ++i+++y+vG++a+I+ i  + + g+  +  vl++++R
      EPX74434.1 154 LLALPIVRRPLFPGFYKAIVTKDPSVSEAIKELVKKRQPYIGAFLH-KDENADTDViTDINQVYPVGVFAQITSIFpTKNAGEtaLTAVLYPHRR 247
                     7789******************************************.333333444677****************9744445556999******* PP

  LON_substr_bdg  93 vkikklekekeegylvaeveiiedd....................................s.epedsdslqkelkalvqeiiekikks.....l 145
                     ++i++l ++k++ ++ ae +++++                                     +  +  ++ ++ ++kal+ ei +++k++      
      EPX74434.1 248 IRITELIPPKDHVVPIAESKELKQAdnpkeittarknkdesdaestasmlqdfnvsvvnveNvYNLPFNRQNPVIKALTGEIMSTFKEIaalshI 342
                     ******6665555565555444333455555555555555555555555555555555443248999999999***************4455579 PP

  LON_substr_bdg 146 arellkllleielllkyedlenpyrLadlvaailpfsneekqelLeeldvedRlkkvlelLkr 208
                     +re++ +++  ++ ++ +++++p+rLad++aa++++  +++q +Le+ ++e+Rl+k+l +Lk+
      EPX74434.1 343 FREQIANFS--ISTGTSNVFDEPARLADFTAAVCSTALQDLQGVLEAQNIEERLEKALIILKQ 403
                     ********7..889999********************************************86 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.0   0.0   3.2e-26   2.5e-23       1     126 [.     553     689 ..     553     694 .. 0.96

  Alignments for each domain:
  == domain 1  score: 83.0 bits;  conditional E-value: 3.2e-26
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSS.........STTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHH CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellsk.........yvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLl 90 
                 ++l+GppG+GKT++ k++a+ l++ef+++s+  l++          y+g+++ k+ + +k++++++    ++iDEid+++ks        + +  ++Ll
  EPX74434.1 553 ICLVGPPGVGKTSVGKSIASALNREFFRFSVGGLTDVaeikghrrtYIGAMPGKVVQALKKVQTEN--PLILIDEIDKVGKSH-------QGDPHSALL 642
                 69*********************************6699************************998..9**********9999.......9999***** PP

                 HHHHHTTTS............SSTEEEEEEESSGGGSTHHHHSTTSSE CS
         AAA  91 teldgvkkk............eskvivigatnrpdkldpallrgRfdr 126
                 + ld ++++             s v++++++n++d+++p+ll +R+++
  EPX74434.1 643 ELLDSEQNSafldhymdmtldVSSVLFVCTANTIDTIPPPLL-DRMEV 689
                 *********************666******************.**987 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.3   0.0     3e-12   2.3e-09       2     138 .]     553     687 ..     552     687 .. 0.77
   2 ?   -2.9   0.0       8.1   6.3e+03      58      86 ..     946     977 ..     943     981 .. 0.81

  Alignments for each domain:
  == domain 1  score: 37.3 bits;  conditional E-value: 3e-12
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------....G-SEEEEESGGG--HHHHHHHHHHHHSSEEE. CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar....egeilvlDEveraesevlnsLlslleerrlll 96 
                 ++LvGppG+gK+++ +++a+alnre++       t  +++kg+r++        ++++v+a +    e  ++++DE++++ ++ ++  +s l e   + 
  EPX74434.1 553 ICLVGPPGVGKTSVGKSIASALNREFFRFSVGGLTDVAEIKGHRRT---YIGAMPGKVVQALKkvqtENPLILIDEIDKVGKSHQGDPHSALLELLDSE 648
                 79*******************************************7...666678888888888888**************999986555554433333 PP

                 .-SSSEEE---.......-EEEEEESS--.-TT-TTHHHHTT- CS
       AAA_5  97 eeggelvkakndd.llerfrviatanpldrslnelspalrsRf 138
                  ++ +l +    +   + + ++ tan+ d     + p+l++R+
  EPX74434.1 649 QNSAFLDHYMDMTlDVSSVLFVCTANTID----TIPPPLLDRM 687
                 33344443333332334488888888888....7777777775 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 8.1
                 -------.....G-SEEEEESGGG--HHHHHHHH CS
       AAA_5  58 plvraar.....egeilvlDEveraesevlnsLl 86 
                 p+++a++     +g++l+++++   e++v+++L 
  EPX74434.1 946 PATTAMTgeltlTGKVLRIGGLR--EKAVAAKLS 977
                 7888999999999*******999..777777775 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.3   0.0     9e-09     7e-06       6     129 ..     553     675 ..     550     681 .. 0.85

  Alignments for each domain:
  == domain 1  score: 26.3 bits;  conditional E-value: 9e-09
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTS......EEEEETGGG-------------HHHHHH CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG......ivllDEidKihpkessgadvSregVqrd 98 
                 i l+gp gvGkt + k++a+ l+    +++ r+    l+   e++      iga pg v ++ +        +l+DEidK+ +         + + + +
  EPX74434.1 553 ICLVGPPGVGKTSVGKSIASALN----REFFRFSVGGLTDVAEIKGHRRTYIGAMPGKVVQALKKvqtenpLILIDEIDKVGK-------SHQGDPHSA 640
                 6789******************9....68999999999888889999999999999998777666788888************.......22347899* PP

                 HHHHHH--EE-...----.--EE-TT-EEEEEE-- CS
       AAA_2  99 LLqileggtlt...dkqg.rkvdtknilfImtgaf 129
                 LL +l+  + +   d++   + d + +lf++t + 
  EPX74434.1 641 LLELLDSEQNSaflDHYMdMTLDVSSVLFVCTANT 675
                 ******76666666777669************996 PP

>> ChlI  Subunit ChlI of Mg-chelatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.0   3.3e-08   2.6e-05      52     121 .]     919     988 ..     868     988 .. 0.91

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 3.3e-08
        ChlI  52 adlkkeGsafDLpiAigilaaleqieaeeetlflGeLsldGslrpvkgvlpialaakkegikkvivpken 121
                  ++ k+G++  +++A ++l+ + ++++ ++t + GeL l+G++ ++ g+ + a+aak +gi++++ pk n
  EPX74434.1 919 GSISKDGPSAGITMATSLLSLALSMPVPATTAMTGELTLTGKVLRIGGLREKAVAAKLSGINEILFPKGN 988
                 5789***************************************************************987 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   3.7e-06    0.0029       8      62 ..     524     579 ..     518     690 .. 0.85
   2 ?   -1.3   0.0       2.1   1.7e+03      60      81 ..     863     884 ..     853     892 .. 0.81

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 3.7e-06
      RuvB_N   8 eyigqekvkeklkifieaakkreealdhvl.lyGpPGlGkttlakiiakelgvklk 62 
                 ++ g ++vk+++  +++  k r++    ++ l+GpPG+Gkt++ k ia+ l+ ++ 
  EPX74434.1 524 DHYGLKDVKDRILELVAVGKLRGTMQGRIIcLVGPPGVGKTSVGKSIASALNREFF 579
                 7789999***99999999****99998865499****************9998764 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 2.1
      RuvB_N  60 klkitsgPvlekagdlaalltn 81 
                  l ++s+P le++g+l  ++++
  EPX74434.1 863 ILSAASAPSLERTGQLGDVMKE 884
                 46789**********9988865 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0   1.9e-06    0.0015       1      68 [.     553     630 ..     553     668 .. 0.63

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 1.9e-06
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf......gvnlrdvakenglllevdpe....aldeskrldedkldklldaleens 68 
                 I+l G+pGvGKt+++k +++ l+       +  l+dva  +g + ++  +     ++  k++++++   l+d++++  
  EPX74434.1 553 ICLVGPPGVGKTSVGKSIASALNReffrfsVGGLTDVAEIKGHRRTYIGAmpgkVVQALKKVQTENPLILIDEIDKVG 630
                 9*****************999865668777555555555444444444444445555555555555555555555544 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1       6.7   5.2e+03      43      75 ..     106     143 ..      84     159 .. 0.59
   2 ?   -1.0   0.2       2.5     2e+03      58     103 ..     395     438 ..     369     465 .. 0.55
   3 !   19.9   0.1   9.2e-07   0.00071       4     112 ..     549     645 ..     545     672 .. 0.77

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 6.7
      AAA_22  43 v...fvtlpsst.sskdllrellralglelka.erlss 75 
                     + t++ss+ + kd  +++ + +gle+++ + +ss
  EPX74434.1 106 TesgKTTAKSSSnNVKDENEQVTESTGLENSGkKKDSS 143
                 24445555555557777788888888877777444444 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 2.5
      AAA_22  58 rellralglelkaerlsseellealeqalraravielliiDEaqhl 103
                 ++ l +l++el +  + ++ + + +eq l++r++ e+++ + +  +
  EPX74434.1 395 EKALIILKQELTN-AQLQSKISRDVEQKLSQRQK-EFILMEQMKGI 438
                 3333333333333.33333333666666666666.66666655555 PP

  == domain 3  score: 19.9 bits;  conditional E-value: 9.2e-07
      AAA_22   4 tagilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelkaerlsseellealeqalrarav.ielliiDEaq 101
                 + +i++++G++G+GKT + + +++ l         ++e++++ + ++t+ +++  +                 ++  ++ qal++ ++  +l++iDE++
  EPX74434.1 549 QGRIICLVGPPGVGKTSVGKSIASAL---------NREFFRFSVGGLTDVAEIKGHRRTY-----------IGAMPGKVVQALKKVQTeNPLILIDEID 627
                 679***********************.........9999999999999555554444444...........4467788999999999999999999999 PP

      AAA_22 102 hlr.s......eealeeL 112
                 ++  s       ++le L
  EPX74434.1 628 KVGkShqgdphSALLELL 645
                 997624455544455444 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1       3.8     3e+03      78     136 ..     407     428 ..     339     479 .. 0.55
   2 !   18.6   0.2   2.5e-06     0.002      24      63 ..     548     589 ..     526     652 .. 0.69

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 3.8
      AAA_16  78 reellrqlldeaesaeleawrekleealaavpelagaeasrllellkrll.allsrderp 136
                 +                                       +l  +++r + ++ls++++ 
  EPX74434.1 407 N--------------------------------------AQLQSKISRDVeQKLSQRQKE 428
                 2......................................233333333333333332332 PP

  == domain 2  score: 18.6 bits;  conditional E-value: 2.5e-06
      AAA_16  24 p..elvllsGesGvGKsslvrellralekdggiflrgkcdql 63 
                    +++ l+G++GvGK+s+ ++++ al+++ + f  g  ++ 
  EPX74434.1 548 MqgRIICLVGPPGVGKTSVGKSIASALNREFFRFSVGGLTDV 589
                 1349********************999999444433333333 PP

>> AAA_PrkA  PrkA AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   2.1e-06    0.0017      58     114 ..     520     576 ..     510     587 .. 0.92

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 2.1e-06
    AAA_PrkA  58 afeedffGleetiekiveyfraaaqrleerkqilyllGPvggGksslverlkkllea 114
                 ++++d +Gl+++ ++i+e +     r+  + +i+ l+GP g Gk+s+ +++ ++l+ 
  EPX74434.1 520 ILDRDHYGLKDVKDRILELVAVGKLRGTMQGRIICLVGPPGVGKTSVGKSIASALNR 576
                 6799*********************************************99999875 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.2       4.5   3.5e+03      50      84 ..     448     487 ..     411     499 .. 0.60
   2 !   15.8   0.0   1.4e-05     0.011       2      88 ..     550     646 ..     549     673 .. 0.68

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 4.5
      AAA_14  50 e.kllelileklke....ekktylflDEiqevpewekalk 84 
                 + +ll++++++++e    e+ + +f DE ++ +++e +  
  EPX74434.1 448 KeSLLNEFKKRAEEtempEHVKKVFNDELSKFQHLEPMAA 487
                 2234444444422234445566688888888888777655 PP

  == domain 2  score: 15.8 bits;  conditional E-value: 1.4e-05
      AAA_14   2 rkilvitGaRrvGKTtllkqlikellvkkesilyinldderd....kkladpe.........kllelileklkeekktylflDEiqev.....peweka 82 
                 ++i++++G+  vGKT + k +++ l    ++++ +++   +d    k +   +         k+ +++++ +++ ++ ++++DEi +v      +  +a
  EPX74434.1 550 GRIICLVGPPGVGKTSVGKSIASALN---REFFRFSVGGLTDvaeiKGH---RrtyigampgKVVQALKK-VQT-ENPLILIDEIDKVgkshqGDPHSA 640
                 689******************98888...99999998877774333222...122355444455555555.444.899********9966666333344 PP

      AAA_14  83 lkslvd 88 
                 l +l+d
  EPX74434.1 641 LLELLD 646
                 444444 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   5.8e-06    0.0045       1     106 [.     553     674 ..     553     675 .. 0.84

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 5.8e-06
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkkl............klkkkdsvysrnpeddfwdgYt....gqevvvidDfgqvkdeenpsdlaelirlvsstp 81 
                   i+l+Gp+g+GK+++ k++a+al +++            + k + ++y++++  ++++  +    +++ ++id++ +v ++ + +  + l++l +s +
    EPX74434.1 553 ICLVGPPGVGKTSVGKSIASALNREFfrfsvggltdvaEIKGHRRTYIGAMPGKVVQALKkvqtENPLILIDEIDKVGKSHQGDPHSALLELLDSEQ 649
                   799********************9999**********9888889999977666666555433267889999*9999998856668899999999999 PP

  RNA_helicase  82 yplnmasleekgtlftSkvvivtsN 106
                        ++  +    ++S++ ++t+N
    EPX74434.1 650 NSAFLDHYMDMTLDVSSVLFVCTAN 674
                   8888888888889999999999999 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0     3e-05     0.023      18     101 ..     550     630 ..     542     646 .. 0.73

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 3e-05
      AAA_30  18 drvavltGpAGtGKttalkalreaweaa..ggrviglAptgkaAkvLaeelgi.eastiakllkrlkgrarlepgtllivDEagmvd 101
                  r+ +l+Gp+G GKt + k+++ a++++   ++v gl+  ++     ++ +g+ +++ ++ l  + +      ++ l+++DE+  v+
  EPX74434.1 550 GRIICLVGPPGVGKTSVGKSIASALNREffRFSVGGLTDVAEIKGHRRTYIGAmPGKVVQALK-KVQT-----ENPLILIDEIDKVG 630
                 46999**********************954477777777777766666677752444444444.3332.....35888888887776 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   4.6e-05     0.036      44     135 ..     547     646 ..     511     653 .. 0.65

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 4.6e-05
   IstB_IS21  44 iekkenivllGpsGvGKshlaialgveavraglsvlfvrvedLveelkrarrd......gklaralkrllkv.dllilDdlgllpldqae..aellfev 133
                 + +   i+l+Gp+GvGK+ +  +++ +  r+ ++ +   ++d+ +e+k +rr       gk+ +alk+++    l+++D++  +  +++    + l+e+
  EPX74434.1 547 TMQGRIICLVGPPGVGKTSVGKSIASALNREFFRFSVGGLTDV-AEIKGHRRTyigampGKVVQALKKVQTEnPLILIDEIDKVGKSHQGdpHSALLEL 644
                 44556799*****************999999888887777775.4455555432322236777777776655357788888877666554114567777 PP

   IstB_IS21 134 ie 135
                 ++
  EPX74434.1 645 LD 646
                 76 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   7.8e-05     0.061       3      93 ..     554     652 ..     552     681 .. 0.67

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 7.8e-05
       AAA_3   3 llegvPGlaktllvkalakaldlefkriqftpdllPsdilGtevfeeke....kefefkkGpvfanllladeinrappktq....salleameerqvtv 93 
                  l g PG++kt + k++a+al+ ef r  +      ++i G++     +        +kk    + l+l dei++     q    salle ++ +q ++
  EPX74434.1 554 CLVGPPGVGKTSVGKSIASALNREFFRFSVGGLTDVAEIKGHRRTYIGAmpgkVVQALKKVQTENPLILIDEIDKVGKSHQgdphSALLELLDSEQNSA 652
                 57799**********************99998888899999854333322321223455556666799*****99765554333499999998766553 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       2.3   1.8e+03     122     153 ..     257     286 ..     249     302 .. 0.73
   2 ?   11.8   0.0   0.00019      0.15       3      77 ..     551     629 ..     549     635 .. 0.60

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 2.3
      AAA_24 122 rknvifiahektrkdedpegeakytrlepklg 153
                 +++v+ ia++k+ k+ d+++e  +t+ + + +
  EPX74434.1 257 KDHVVPIAESKELKQADNPKE--ITTARKNKD 286
                 459*********999999888..444444444 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 0.00019
      AAA_24   3 lkiliyGpsgiGKTtlakel...gpkplfidtekGlksldadkfpdieswedfldevvel.aaeladyktlviDtidel 77 
                 + i+++Gp+g+GKT++ k++    ++ +f    +Gl ++  +k+ + + + ++  +vv+  ++ + +   + iD id++
  EPX74434.1 551 RIICLVGPPGVGKTSVGKSIasaLNREFFRFSVGGLTDVAEIKGHRRTYIGAMPGKVVQAlKKVQTENPLILIDEIDKV 629
                 569***************9955422222222223566666666665555555554444444555555556667766665 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       2.9   2.3e+03     112     148 ..     177     216 ..     174     225 .. 0.72
   2 ?    9.1   0.1    0.0015       1.1       2      33 ..     553     586 ..     552     601 .. 0.78
   3 ?    2.1   0.1       0.2   1.6e+02      84     107 ..     606     629 ..     594     652 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 2.9
                 HHHHHHHHHHHTTTSEEEEE--SS-...-SHHHHHHHT-T CS
    NTPase_1 112 kkfkeaveevLksekpvlavihrrk...dlalveeirerk 148
                 ++++ea++e++k+ +p ++ + +++   d +++ +i++  
  EPX74434.1 177 PSVSEAIKELVKKRQPYIGAFLHKDenaDTDVITDINQVY 216
                 57899*******9999998865555366667777776654 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0015
                 EEEE--TTSSHHHHHHHHHHHH.....GGGEEEE CS
    NTPase_1   2 vfiTGppGvGKtTlvkkvlellkss..gvkvgGf 33 
                 +++ GppGvGKt + k ++++l+++   ++vgG+
  EPX74434.1 553 ICLVGPPGVGKTSVGKSIASALNREffRFSVGGL 586
                 6789******************988555567775 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.2
                 HHHHHHHHHHHHH-EEEE---STT CS
    NTPase_1  84 lalealrkalseadviviDEiGkm 107
                  +++al+k ++e+ +i+iDEi k 
  EPX74434.1 606 KVVQALKKVQTENPLILIDEIDKV 629
                 56899999999999*******775 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00019      0.15      89     124 ..     540     575 ..     515     584 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00019
                  THHHHHHHCTTSEEEEECSTTSSHHHHHHHHCTT-- CS
  RsgA_GTPase  89 gleelkellkdktsvlvGqSGvGKStLinallpele 124
                  ++ +l+  +++++++lvG+ GvGK+++ +++++ l+
   EPX74434.1 540 AVGKLRGTMQGRIICLVGPPGVGKTSVGKSIASALN 575
                  56789999******************9999888765 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.1   0.00093      0.72       1      27 [.     551     577 ..     551     654 .. 0.84

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00093
                 SCEEEEC-TTTCHHHHHHHHHHHHCTS CS
       NACHT   1 rlvilqGeaGsGKTtLlqklalawaeg 27 
                 r+++l G++G+GKT   +++a+a+ ++
  EPX74434.1 551 RIICLVGPPGVGKTSVGKSIASALNRE 577
                 689*******************99765 PP

>> SKI  Shikimate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   0.00017      0.13       1      21 [.     559     579 ..     559     581 .. 0.95

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00017
                 TTSSHHHHHHHHHHHHTSEEE CS
         SKI   1 mGaGKstvGkllAkklglefi 21 
                 +G+GK++vGk +A +l++ef+
  EPX74434.1 559 PGVGKTSVGKSIASALNREFF 579
                 69*****************97 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1       7.7     6e+03      78     110 ..     442     475 ..     321     483 .. 0.57
   2 ?    9.3   0.5    0.0017       1.3       7      37 ..     547     577 ..     543     649 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 7.7
      AAA_19  78 ldfddlltealelleeaeeekklqeee.llivDE 110
                 l+ dd ++  l+ +++++ee+++ e+   ++ DE
  EPX74434.1 442 LGHDDPKESLLNEFKKRAEETEMPEHVkKVFNDE 475
                 3334433333333344444444444444555555 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.0017
      AAA_19   7 alkekvllvtaGpGtGKTrvlkhivallvel 37 
                 +++ ++++++++pG GKT v k i + l+++
  EPX74434.1 547 TMQGRIICLVGPPGVGKTSVGKSIASALNRE 577
                 578899**************99998888765 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.2       6.7   5.2e+03      76     118 ..     392     427 ..     365     439 .. 0.51
   2 ?    7.2   0.0    0.0053       4.1       3      44 ..     533     574 ..     532     583 .. 0.90
   3 ?    3.2   0.1      0.09        70     108     148 ..     606     644 ..     583     654 .. 0.75

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 6.7
    ATPase_2  76 kklekalgiavpkaeleeilk.eksklvfkaielllekikkkgk 118
                 ++lekal i +++   ++ l+ + s++       + +k+++++k
  EPX74434.1 392 ERLEKAL-IILKQELTNAQLQsKISRD-------VEQKLSQRQK 427
                 2333333.2222222222222233333.......4444444444 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0053
    ATPase_2   3 dRekelkeleeilerepneiyfiYGpegsGKtaLlkeiienl 44 
                 dR  el  + ++  + + +i+ + Gp g+GKt++ k i++ l
  EPX74434.1 533 DRILELVAVGKLRGTMQGRIICLVGPPGVGKTSVGKSIASAL 574
                 8999999999**9*********************99999877 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.09
    ATPase_2 108 lllekikkkgkk.iiiiiDelqklidlglngaellvkeLlnl 148
                 ++ +++kk +++ + i+iDe+ k++  ++  +++  ++Ll+l
  EPX74434.1 606 KVVQALKKVQTEnPLILIDEIDKVG--KSH-QGDPHSALLEL 644
                 5677888888888**********99..655.44444455554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1042 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2040  (0.113782); expected 358.6 (0.02)
Passed bias filter:                      728  (0.0406046); expected 358.6 (0.02)
Passed Vit filter:                       106  (0.00591221); expected 17.9 (0.001)
Passed Fwd filter:                        29  (0.00161749); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              23  [number of targets reported over threshold]
# CPU time: 1.02u 0.33s 00:00:01.35 Elapsed: 00:00:00.52
# Mc/sec: 6055.51
//
Query:       EPX74435.1  [L=184]
Description: ADP-ribosylation factor Alp41 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-31  109.1   0.4    4.2e-31  107.7   0.3    1.6  2  Arf       ADP-ribosylation factor family
     0.0015   18.1   0.0     0.0022   17.6   0.0    1.4  1  Ras       Ras family
      0.003   17.0   0.0     0.0043   16.5   0.0    1.2  1  SRPRB     Signal recognition particle receptor beta subunit
  ------ inclusion threshold ------
      0.023   14.6   0.0      0.025   14.5   0.0    1.3  1  NACHT     NACHT domain


Domain annotation for each model (and alignments):
>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.23     1e+03      18      32 ..      40      54 ..      23      71 .. 0.72
   2 !  107.7   0.3   9.4e-35   4.2e-31      74     174 ..      73     172 ..      60     173 .. 0.95

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.23
                EEEESTTSSHHHHHH CS
         Arf 18 lllGLDnaGKtTilk 32
                l  GLDna K  i +
  EPX74435.1 40 LQRGLDNADKYCISY 54
                666999999987755 PP

  == domain 2  score: 107.7 bits;  conditional E-value: 9.4e-35
                 GGGGGCTTESEEEEEEETT-CTTHHHHHHHHHHHCTSGCCTTSEEEEEEE-TTSTTSS-HHHHHHHTTGGGSSSSSSEEEEEEBTTTTBTHHHHHHHHH CS
         Arf  74 lWknYfektdavifvvDsadreRleeakeeLkalleeeelkevallvlaNKqDlpealseeelrellgleelkgkrkleiqkcsavkgeglkeglewls 172
                 +WknYfe+t+a+++vvDs d++Rl+e++++L++ll ee+l +v ll+laNK D++++l+++ +++ll+l++lk +r+ +i+++sa++geg++e+++wl+
  EPX74435.1  73 FWKNYFESTEAIVWVVDSLDESRLKECEHQLHELLLEEKLLNVSLLILANKSDAAGSLNAKTIEQLLHLNDLK-SRHYCIFSVSALTGEGIQEAIKWLA 170
                 7************************************************************************.************************8 PP

                 HH CS
         Arf 173 es 174
                 ++
  EPX74435.1 171 SD 172
                 75 PP

>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   4.9e-07    0.0022      66     160 ..      75     173 ..      43     175 .. 0.82

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 4.9e-07
                 HHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHHHST.TTSEEEEEEETTTGGG...G-SS-HHHHHHHHHHHTSEEEEEBTTTTCTHHHHHHHHHHHH CS
         Ras  66 elyyrdaegillvyditsresfenvkkwveeikrvae.envpivLvGnKvDlee...kravsteegeelakelglkfletSAktnenveeafeellrei 160
                 ++y++++e+i+ v d  +++ ++++++ ++e+    +  nv++++++nK+D +     +++++    +  k+ ++  + +SA t e+++ea++ l++++
  EPX74435.1  75 KNYFESTEAIVWVVDSLDESRLKECEHQLHELLLEEKlLNVSLLILANKSDAAGslnAKTIEQLLHLNDLKSRHYCIFSVSALTGEGIQEAIKWLASDL 173
                 679999********************76666655555588***********9984334444444444444677777899*************9998876 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   9.6e-07    0.0043      74     137 ..      79     139 ..      65     149 .. 0.87

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 9.6e-07
                 GGEEEEEEEEETTS-HHHHHHHHHHHHHHHHHHHHHTT---EEEEEE-TTSTT---HHHHHHHH CS
       SRPRB  74 sslkglvfvvDStidpkevkevAEllyeilliteklkdavdiliACnKqelflakspklikdaL 137
                 +s  ++v+vvDS  d+ ++ke    l e+ll+ ++l  +v++li  nK++ + + ++k i + L
  EPX74435.1  79 ESTEAIVWVVDS-LDESRLKECEHQLHELLLEEKLL--NVSLLILANKSDAAGSLNAKTIEQLL 139
                 67889******8.78899************998854..699*******************9977 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   5.5e-06     0.025      72     150 ..      73     144 ..      16     172 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 5.5e-06
                 CHHHHCCSCCCEEEEEE-STT-SS-TCH.........HHHHHCTTTTT--EEEEEEECCCHHHHCTTSSCE..EEEE-- CS
       NACHT  72 vwavllelperlLlilDglDelvtdlgqkekqpvrtlLselirkkllpeasllltvrpralrdleeqleeaivlevegf 150
                 +w++  e  e ++ ++D+lDe + + ++    ++++l   l+++kll  + l+l+ +++a   l  +  e+  l+++++
  EPX74435.1  73 FWKNYFESTEAIVWVVDSLDESRLKECE---HQLHEL---LLEEKLLNVSLLILANKSDAAGSLNAKTIEQ-LLHLNDL 144
                 799999999************9997777...444444...59999**************998854443333.3444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       635  (0.0354175); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.44
# Mc/sec: 1268.36
//
Query:       EPX74436.1  [L=1491]
Description: AMP binding enzyme [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.4e-31  107.9   0.0    1.3e-17   63.5   0.0    4.0  3  AMP-binding  AMP-binding enzyme


Domain annotation for each model (and alignments):
>> AMP-binding  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.5   0.0   7.4e-22   1.3e-17       8     289 ..     166     460 ..     160     479 .. 0.78
   2 !    3.7   0.0    0.0011        19     342     373 ..     568     599 ..     561     653 .. 0.87
   3 !   33.5   0.0   9.4e-13   1.7e-08      20     406 ..     882    1307 ..     872    1312 .. 0.71

  Alignments for each domain:
  == domain 1  score: 63.5 bits;  conditional E-value: 7.4e-22
                  STTSEEEEE....CCSTEEEEHHHHHHHHHHHHHHHH.HTTSSTT-EEEEEESS..SHHHHHHHHHHHHTT-EEEEEETTS-HHHHHHHHHHHTESEE CS
  AMP-binding   8 tpdkvalvd....sgegqtlTYreldervnrlAagLr.slGvkkgdrVaillpn..spewvvallailkaGavvvplnptltaeelayiledseakvl 98 
                  +p+++a ++    + e  +++++ + ++v+r+A++ + + G+ +g++V +++++   +e++++l+++l +G++v p+ p+l+ ++la ++++ ++kv 
   EPX74436.1 166 NPKAIAHIFlgkkGREISQFSWEKFFNKVTRVAKVVKkQVGLLPGTKVILYYRKleLAEYLISLFGCLLLGLIVLPVHPSLSLHQLACVVKNEKVKVA 263
                  6888899899888888999******************99*************973369**************************************** PP

                  EETCTCCC.HHHHHHHHSCC-EECEEEEESCCS-HCCHCCCHCCCCSCTTS-TSCCCS-BTTSEEEEEEE--SSSS-EEEEEEHHHHHHHHHHHH..H CS
  AMP-binding  99 iatvdsel.leklleaaakleavklvivldadellkeeelkeeeeseekaekpeeeeelkpddlayiiYTSGTTGkPKGVmlshrnlvanvaslk..l 193
                  + t++s+  +     ++++l +++++   ++ ++  +      + + ++   + +  +++p+d+a+i Y   +  +P  ++++h  ++++v+ l   +
   EPX74436.1 264 F-TTESTFrIFV---KDSELGSKDEIEWWKSTDFIHY------KVEVNS---QLTF-QPSPHDVALIDYIFESPSHPTKAVYKHHTIMNQVKCLTssI 347
                  *.6665553332...2333444444444444444433......211222...2233.789******************************99887775 PP

                  HHCSCCTT..........T-EEEESS-TTSCHHHHHHHHHHHHTT-EEEE-TTCGCCHHHHHHHHHHHHT-SEEEEEHHHHH.HHHH.CCCHH.C.HH CS
  AMP-binding 194 etrfklke..........ddvvlsilplahifglilelllallsGatvvllpkdaaldpklllelieklkvtviagvPrvle.alle.sgalk.a.ak 277
                   t+ + ++          +d +++    + ++gli++++ a++sG + ++++++   +p+ll+  ++k++v++    ++ l+  + + ++++  + ++
   EPX74436.1 348 ITHPSSRRkcvsvdvqstGDNFITNFQPHNMLGLIMGVFNAMFSGYQTIFCETEVLKTPGLLVYILSKYRVSHALFDYASLKqTIYNyQEDPMsTlHY 445
                  555332224777999999**********************************9988889*************99888877773444433333322333 PP

                  HHC...CGTT-SEEE CS
  AMP-binding 278 kak...dlsslrlvl 289
                  k++   dls l++++
   EPX74436.1 446 KKNyipDLSNLKICM 460
                  322555777777765 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.0011
                  E-TTEEEEEE-TTTSCBEETTSEEEEEEEETT CS
  AMP-binding 342 plpgvevkivDeetgepvpdgeeGellvrgpg 373
                  p+p+  v+iv   t+e +++g+ G l+v +++
   EPX74436.1 568 PIPESSVAIVSNPTQEICEEGKIGNLWVYSNC 599
                  99********999***************9875 PP

  == domain 3  score: 33.5 bits;  conditional E-value: 9.4e-13
                   TEEEEHHHHHHHHHHHHHHHH.HTTSSTT-EEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS-H...HHHHHHHHHHT...ESEEEETCTCCC.H CS
  AMP-binding   20 gqtlTYreldervnrlAagLr.slGvkkgdrVaillpnspewvvallailkaGavvvplnptlta...eelayiledse...akvliatvdsel.l 107 
                      ++++ ++++v +l  +++ +  +++ +  ++l+   +e+vv+l++++ +G+ ++pl  +  +   +e++ i++ ++   + +++   ds+  +
   EPX74436.1  882 TINISWSAFENKVASLVEHMQtNVKIRQNQYALLLYNDPYEFVVSLYGCFFLGICAIPLQIHAVNhvvKEIEEIMRLCDqfpVNFIL-LDDSTFiN 976 
                   5679*****************999999999999999999*********************954444445555555555433278888.44566678 PP

                   HHHHHHHSCC-EECEEEEESCCS-HCCHCCCHCCCCSCTT.S-TSCCCS-BTTSEEEEEEE--SSSS-EEEEEEHHHHHHHHHHHHHHHCSCCTT. CS
  AMP-binding  108 eklleaaakleavklvivldadellkeeelkeeeeseeka.ekpeeeeelkpddlayiiYTSGTTGkPKGVmlshrnlvanvaslkletrfklke. 201 
                    k+++  + l++v  +  ++  ++++++ l++++ + +k    ++ +e  ++d +a++  +  T G    V  sh  l++ ++++k   +f l++ 
   EPX74436.1  977 IKSRDSFHHLQQVCNEKRVKVPKMYNTNYLPTAKRPLKKLiS-KKSKEHYNKDKVALVTVSRLTDGSTFSVNFSHSDLLHYCREQK---EFILGDn 1068
                   899999999999999999999999999999999988776642.445667999********************************64...5555553 PP

                   T-EEEESS-TTSCHHHHHHHHHHHHTT-EEEE-TTCGC.CHHHHHHH.HHHHHT-SEEEEEHHHHHHH..........HHCCCHHC........HH CS
  AMP-binding  202 ddvvlsilplahifglilelllallsGatvvllpkdaa.ldpkllle.lieklkvtviagvPrvleal..........lesgalka........ak 277 
                   d+ +l    +   +gl    +l ++ G   vl++++ +  ++++ l+ ++ k  + v+   + +l+ l          l+     +         +
   EPX74436.1 1069 DSSLLGGIEFGSGIGLLHTAFLGIYTGLPTVLVRRSGDrCQKEITLQtMLGKRIPKVVLPMNYLLNTLekteiceyegLN-----EmvkciivpCY 1159
                   7778999****************************999655555554055555566666666666666443332222211.....01223344444 PP

                   HHCCGTT-SEEE.......EESS-EBHHHHHHHHHHHTCEEEEEEEEGGGSSECEE.................CHCTTTCTSTTS-BEE-TTEEEE CS
  AMP-binding  278 kakdlsslrlvl.......lggeplspellrffralfgeevlegYGlTEttgvvtv.................lpleedkkklgsvGkplpgvevk 349 
                   ++ + s++r ++       l  e +  +  + ++ l +   ++  G   +                       ++  ++ ++++  G+    +++ 
   EPX74436.1 1160 EKIETSKVRAIIdnmfrlnLKTEMIKLAYCHPLNPLIC--WSDELGINDM-----KsdfdtndlkkglitlkgDN-FNKANTIYGLGTNCLQNDIC 1247
                   44455556664333333222333333333333333322..2333444444.....14555568888888888644.445566777899999***** PP

                   EE-TTTSCBEETTSEEEEEEEETTS-SEBTT-.....HHHHHHHEEETCCEEEEEEEEEEET CS
  AMP-binding  350 ivDeetgepvpdgeeGellvrgpgvmkgYlkk.....peataeafdsegrwlrTGDlgrlde 406 
                   +v +e ++ + +ge+Ge+++       + + +     + +t+e ++ + +++rTG+lg++++
   EPX74436.1 1248 VVHPESKRICNEGEVGEIWIAARRGSYCTFDHrnvgsELLTEENLK-K-QYFRTGYLGFIHP 1307
                   ********************98865555555423443666888887.4.6*********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1491 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       658  (0.0367003); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.87u 0.28s 00:00:01.14 Elapsed: 00:00:00.44
# Mc/sec: 10112.75
//
Query:       EPX74437.1  [L=376]
Description: sterol 24-C-methyltransferase Erg6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.6e-26   90.6   0.1    9.2e-26   89.9   0.1    1.4  1  Sterol_MT_C      Sterol methyltransferase C-terminal
    4.7e-19   68.8   0.0    9.3e-19   67.9   0.0    1.5  1  Methyltransf_11  Methyltransferase domain
    2.3e-16   60.2   0.0    4.4e-16   59.4   0.0    1.5  1  Methyltransf_25  Methyltransferase domain
    7.8e-14   51.8   0.0    1.3e-13   51.2   0.0    1.3  1  Methyltransf_23  Methyltransferase domain
    8.2e-14   51.7   0.0    1.3e-13   51.0   0.0    1.4  1  Methyltransf_31  Methyltransferase domain
    4.6e-09   36.9   0.1    2.6e-08   34.5   0.0    2.2  3  Methyltransf_12  Methyltransferase domain
    6.4e-09   35.5   0.0    1.1e-08   34.7   0.0    1.3  1  Ubie_methyltran  ubiE/COQ5 methyltransferase family
    2.9e-08   33.3   0.0    4.4e-08   32.7   0.0    1.3  1  CMAS             Mycolic acid cyclopropane synthetase
    0.00011   21.9   0.0    0.00018   21.2   0.0    1.3  1  MetW             Methionine biosynthesis protein MetW
    0.00033   19.3   0.0     0.0004   19.1   0.0    1.2  1  Methyltransf_29  Putative S-adenosyl-L-methionine-dependent m
  ------ inclusion threshold ------
       0.01   15.7   0.0      0.031   14.1   0.0    1.8  1  Methyltransf_8   Hypothetical methyltransferase
      0.028   14.2   0.1       0.86    9.3   0.1    2.2  1  PCMT             Protein-L-isoaspartate(D-aspartate) O-methyl
       0.11   12.3   0.1       0.22   11.3   0.1    1.4  1  CDC48_2          Cell division protein 48 (CDC48), domain 2


Domain annotation for each model (and alignments):
>> Sterol_MT_C  Sterol methyltransferase C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.9   0.1   6.7e-29   9.2e-26       1      66 []     309     374 ..     309     374 .. 0.98

  Alignments for each domain:
  == domain 1  score: 89.9 bits;  conditional E-value: 6.7e-29
  Sterol_MT_C   1 ltvfrmtkvGrfithnlvkvleflglapkGtqkvaefLekAadsLvaGGkegiFTPmylfvaRKPl 66 
                  +tvfr++++G+fit++ vkvle lg++ kGt++v+++L+ A d+L++GGk+++FTPmyl++++KP+
   EPX74437.1 309 ITVFRTSTLGKFITRHSVKVLERLGMVSKGTSEVSDTLAIAQDGLIEGGKKKLFTPMYLMIGKKPE 374
                  599**************************************************************6 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.9   0.0   6.7e-22   9.3e-19       1      94 [.     128     224 ..     128     226 .. 0.89

  Alignments for each domain:
  == domain 1  score: 67.9 bits;  conditional E-value: 6.7e-22
                      EEET-TTSHHHHHHHHTT.SEEEEEES-HHHHHHHHHHCCHHT-..EEEETTEECCCTSS-TT-EEEEEEES-CCC-CCHHHHHHHHHHHEEEE CS
  Methyltransf_11   1 LdvGcGtGrlaealakrg.arvvgvDlskemlklakekaseegl..kvefvvadaeklpfednsfDlvvssevlhhvedpekalkeiaRvLkpg 91 
                      LdvGcG G  a+++++   +++vg++ +++++ +a + a +++l  k  fv++d+ k+pf dn+fD+v++ e+  h + +e + +ei+RvLkpg
       EPX74437.1 128 LDVGCGVGGPAREITEFTgCNLVGLNNNDYQISRAVNYAIKRNLdkKQVFVKGDFMKMPFDDNTFDFVYAIEATVHAPSLEGVYSEIYRVLKPG 221
                      8**************7777*************888544444444554569******************************************** PP

                      EEE CS
  Methyltransf_11  92 Gll 94 
                      G++
       EPX74437.1 222 GVF 224
                      *97 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.4   0.0   3.2e-19   4.4e-16       1      97 []     127     222 ..     127     222 .. 0.94

  Alignments for each domain:
  == domain 1  score: 59.4 bits;  conditional E-value: 3.2e-19
                      EEEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTT..TEEEEESBCCGBSSSTTTEEEEEEESTGGGSSHHHHHHHHHHHHHH CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeegl..nvefvqgdaedlpfedgsfDlvvssgalhhlsdedlekalkeiarv 92 
                      vLd+GcG G  ++++ +  g ++++g+  ++ ++ +a + a +++l  +  fv+gd+ ++pf+d++fD+v+++ a  h   + le +++ei+rv
       EPX74437.1 127 VLDVGCGVGGPAREITEFTG-CNLVGLNNNDYQISRAVNYAIKRNLdkKQVFVKGDFMKMPFDDNTFDFVYAIEATVH--APSLEGVYSEIYRV 217
                      9***************9877.********************9999998999*********************988444..5689********** PP

                      EEEEE CS
  Methyltransf_25  93 LkpgG 97 
                      LkpgG
       EPX74437.1 218 LKPGG 222
                      ****9 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.2   0.0   9.2e-17   1.3e-13      20     164 ..     121     277 ..      98     278 .. 0.83

  Alignments for each domain:
  == domain 1  score: 51.2 bits;  conditional E-value: 9.2e-17
  Methyltransf_23  20 lraggrvLdiGcGtGillevlren.gfsvtgvDlspeaveiae.......kakkaqkdqfdeqeaaepqgkfdlIvlrevlehvpdppellrqi 105
                        +++rvLd+GcG+G  ++++ e+ g++++g   ++ ++++a         +kk+++++ d ++ ++++++fd+++++e + h p+++ + + i
       EPX74437.1 121 ITPDSRVLDVGCGVGGPAREITEFtGCNLVGLNNNDYQISRAVnyaikrnLDKKQVFVKGDFMKMPFDDNTFDFVYAIEATVHAPSLEGVYSEI 214
                      46788****************9988**********************9996666666666669******************************* PP

  Methyltransf_23 106 atllkpgGylllseplasl...kedrllldwlylvpagrhi.sffsarslkelleeaGlevve 164
                      ++ lkpgG++ + e+  s+   + +   + ++y  + g+ i ++ +  +  e+++++G+e++e
       EPX74437.1 215 YRVLKPGGVFGVYEWVMSDdydSTNPEHRRIAYNIEIGDGIpQMVRKCDALEAFKKSGFEILE 277
                      *********9999976666443233334446777777766669999999999*******9997 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.0   0.0   9.7e-17   1.3e-13       3     113 ..     123     230 ..     121     279 .. 0.89

  Alignments for each domain:
  == domain 1  score: 51.0 bits;  conditional E-value: 9.7e-17
  Methyltransf_31   3 kglrvlDlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaqklgld.nveFeqgdieeleklledekfDlilsnevlnaladpdkile 95 
                       + rvlD+GCG G  + e+    ++++++vG+ ++   i++A + a k +ld    F +gd+ +++  + d++fD++ + e+  + ++++ ++ 
       EPX74437.1 123 PDSRVLDVGCGVGGPAREIT--EFTGCNLVGLNNNDYQISRAVNYAIKRNLDkKQVFVKGDFMKMP--FDDNTFDFVYAIEATVHAPSLEGVYS 212
                      6789****************..46789*****************999999998899999*******..************************** PP

  Methyltransf_31  96 eiervlkpggilliedpr 113
                      ei rvlkpgg++ + +  
       EPX74437.1 213 EIYRVLKPGGVFGVYEWV 230
                      ***********9776655 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1       3.8   5.3e+03      35      71 ..      36      82 ..      27      86 .. 0.53
   2 !   34.5   0.0   1.9e-11   2.6e-08       1      99 []     128     224 ..     128     224 .. 0.78
   3 ?   -2.1   0.0       4.8   6.6e+03      40      73 ..     268     312 ..     256     317 .. 0.55

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 3.8
  Methyltransf_12 35 dakeklakrennnnnnvelealdlldldgg...........ssfDlvv 71
                     d +e+ +k ++++  + +  ++++ d+              +++Dl +
       EPX74437.1 36 DIQEQKKKLSEYFQFWDKGYKDESQDD-RDvrvsdykklvnNYYDLAT 82
                     555555555554444444444443222.22466666667777777765 PP

  == domain 2  score: 34.5 bits;  conditional E-value: 1.9e-11
  Methyltransf_12   1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakre.nnnnnnvelealdlldldggssfDlvvasnvlhhlkdirevldnirklL 93 
                      L++GcG+G  +r++ e   +++++g+  +  +i +a +   kr+ +++  +v+ +      +   ++fD v+a+++  h + ++ v ++i+++L
       EPX74437.1 128 LDVGCGVGGPAREITEF-TGCNLVGLNNNDYQISRAVNYAIKRNlDKKQVFVKGDFMKMPFD--DNTFDFVYAIEATVHAPSLEGVYSEIYRVL 218
                      8*************777.***************55555544444033333344444443333..37**************************** PP

  Methyltransf_12  94 kpgGrl 99 
                      kpgG++
       EPX74437.1 219 KPGGVF 224
                      ****86 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 4.8
  Methyltransf_12  40 lakrennnnnnvelealdlldldgg...........ssfDlvvas 73 
                      ++k + +  ++ +l ++d  +l+             + +Dl++++
       EPX74437.1 268 FKKSGFEILEQQDLAENDNPELPWYypvtgdvtkcqNVWDLITVF 312
                      444444444444444444333333366666666666777777765 PP

>> Ubie_methyltran  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.7   0.0   8.2e-12   1.1e-08      38     154 ..     114     229 ..     103     243 .. 0.81

  Alignments for each domain:
  == domain 1  score: 34.7 bits;  conditional E-value: 8.2e-12
                      HHHHH--S--TTEEEEES-TT-HHHHHHHHHHHHHHEEEEEES-HHHHHHHHH.HHHHHTSSTEEEEE--TTT-TTS-T-EEEEEEES-GGG-S CS
  Ubie_methyltran  38 fveklvavkrgakvlDvagGtgDlafklsdsvgekgkvvvlDinenmLkvgek.klkeegkinieflqanaeeLpfeddsfDvvtvsfGlrnvt 130
                      ++ ++++  + ++vlDv +G g  a ++++  g   ++v+l+ n+  ++ + +  +k++  ++  f++++ +++pf+d++fD+v         +
       EPX74437.1 114 YLAHRMGITPDSRVLDVGCGVGGPAREITEFTGC--NLVGLNNNDYQISRAVNyAIKRNLDKKQVFVKGDFMKMPFDDNTFDFVYAIEATVHAP 205
                      566778888999****************999875..56777777666665554145666666777*****************875555555689 PP

                      -HHHHHHHHHHHEEEEEEEEEEEE CS
  Ubie_methyltran 131 DklkaLkeayrvlkpGGrlvvlef 154
                        + +  e+yrvlkpGG + v e 
       EPX74437.1 206 SLEGVYSEIYRVLKPGGVFGVYEW 229
                      999***************999885 PP

>> CMAS  Mycolic acid cyclopropane synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.7   0.0   3.2e-11   4.4e-08       8     218 ..      72     281 ..      61     292 .. 0.74

  Alignments for each domain:
  == domain 1  score: 32.7 bits;  conditional E-value: 3.2e-11
                 HHHHHHHTS-HHHHCTTS-TT---S----SSTT--HHHHHHHHHHHHHTTTT--TT-EEEEES-TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHH CS
        CMAS   8 enikahYDlsndffalfldptmtYsCAyferddmtLeeAqlaKldlileklelkpGmtlLdiGcGWGslvrraverydvkvvglTlSkeqaklakkrvd 106
                 + +++ YDl+ d+++    ++  +s  +++ +    ++   +  + + +++++ p +++Ld+GcG G+ +r+  e  + + vgl   + q  +a +   
  EPX74437.1  72 KLVNNYYDLATDLYEYGWCQSFHFSR-FYKGEAF--AQSIARHEHYLAHRMGITPDSRVLDVGCGVGGPAREITEFTGCNLVGLNNNDYQISRAVNYAI 167
                 567899*********99999999985.4444443..45555556677899*********************************9888888877777777 PP

                 TS-SSS-EEEEES-GGG---...--SEEEEES-GGGTSGGGHHHHHHHHHHHS-TT-EEEEEEEEE--HHHHH.CTTCCCHHHHHHT.STTS---BHHH CS
        CMAS 107 eldlerkvevklldyedlde...kvdrvvsvgafehvgkenydtffkklkkllkedGllllhtitslhkkela.erglklkfidkei.FPgGelpsiee 200
                 +++l++k+     d+  ++     +d v +++a+ h    +++  +++++++lk++G++ +   ++ +    +  ++   + i+ +i   +G    +++
  EPX74437.1 168 KRNLDKKQVFVKGDFMKMPFddnTFDFVYAIEATVH--APSLEGVYSEIYRVLKPGGVFGVYEWVMSDDYDSTnPEH---RRIAYNIeIGDGIPQMVRK 261
                 788777777778899986433369*******99866..678999***************888777666554440333...3455555223444444444 PP

                 HHH..HHHHTT-EEEEEEE- CS
        CMAS 201 iee..eiseagftvvdvesl 218
                  ++   +++ gf++++ + l
  EPX74437.1 262 CDAleAFKKSGFEILEQQDL 281
                 43332677777777777766 PP

>> MetW  Methionine biosynthesis protein MetW
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   1.3e-07   0.00018      11      85 ..     121     201 ..     110     221 .. 0.72

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 1.3e-07
        MetW  11 ikpgsrvldlGcGdGellellkeekqvdgrGleldeegv....aecvakGlsviqgdldkdlen..fedksfdyvvlsqtl 85 
                 i p srvld+GcG G   + + e  + +  Gl++++  +    + ++++ l   q  +  d+ +  f+d++fd+v    + 
  EPX74437.1 121 ITPDSRVLDVGCGVGGPAREITEFTGCNLVGLNNNDYQIsravNYAIKRNLDKKQVFVKGDFMKmpFDDNTFDFVYAIEAT 201
                 89*******************************99866500005566788888888788887644499*****99654443 PP

>> Methyltransf_29  Putative S-adenosyl-L-methionine-dependent methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0   2.9e-07    0.0004     120     216 ..     126     225 ..      75     306 .. 0.82

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 2.9e-07
  Methyltransf_29 120 tvlDvGCgvasfgaylls.rdvltlslapkDeh.eaqvqfaLeRgvpailavl.g.tkrlpyPsrsfdlihCsrCridwteedgilllevdRvl 209
                       vlDvGCgv   +  + +  +   + l  +D      v +a+ R +      + g  +++p+  ++fd++      ++  + +g++  e+ Rvl
       EPX74437.1 126 RVLDVGCGVGGPAREITEfTGCNLVGLNNNDYQiSRAVNYAIKRNLDKKQVFVkGdFMKMPFDDNTFDFVYAIEATVHAPSLEGVY-SEIYRVL 218
                      69*********999999834567778999997625679********8765544142489*************************98.7****** PP

  Methyltransf_29 210 RpgGyfv 216
                      +pgG f 
       EPX74437.1 219 KPGGVFG 225
                      ****873 PP

>> Methyltransf_8  Hypothetical methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   2.2e-05     0.031     108     158 ..     177     228 ..     122     238 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2.2e-05
                     EEES-TTS-S--TT-EEEEEEE.S---SS-HHHHHHHHHHHEEEEEEEEEEE CS
  Methyltransf_8 108 vvacdlakvPledesvdvavfc.lslmgtnladflkeanrvlkvGGllkvae 158
                      v  d+ k+P +d++ d +     ++ +  l+    e++rvlk+GG++ v e
      EPX74437.1 177 FVKGDFMKMPFDDNTFDFVYAIeATVHAPSLEGVYSEIYRVLKPGGVFGVYE 228
                     356899***********8654414566778999**************98876 PP

>> PCMT  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.1   0.00062      0.86      70     132 ..     116     181 ..     104     222 .. 0.65

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00062
                 T....--TT-EEEEES-TTSHHHHHHHHHHCTTCEEEEEESBH.HHHHHHHHHHHHCTTCSEEEEES- CS
        PCMT  70 e....lkkgarvLevGsGsGyltavlarlvgekgrvvsierik.elveeakrnlkkldlenvivvvgD 132
                      +++ +rvL+vG+G G  +  ++++ g +   v+++    ++ ++ +  +k++  ++ ++v gD
  EPX74437.1 116 AhrmgITPDSRVLDVGCGVGGPAREITEFTGCNL--VGLNNNDyQISRAVNYAIKRNLDKKQVFVKGD 181
                 3344499999********9988877777766554..77766541333333444544433344444555 PP

>> CDC48_2  Cell division protein 48 (CDC48), domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   0.00016      0.22       9      37 ..     166     195 ..     159     196 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00016
                 HHHCCCTT.EEE-TTEEEEECCTCCCEEEE CS
     CDC48_2   9 ylkrqFlg.rpvtkGdlvvfefkgqeiklv 37 
                 ++kr++ + ++++kGd + ++f  +++++v
  EPX74437.1 166 AIKRNLDKkQVFVKGDFMKMPFDDNTFDFV 195
                 899***999**************9999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (376 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       566  (0.031569); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 2862.71
//
Query:       EPX74438.1  [L=104]
Description: BolA domain UV induced protein Uvi31 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-27   95.4   1.0    2.4e-27   95.0   1.0    1.2  1  BolA      BolA-like protein


Domain annotation for each model (and alignments):
>> BolA  BolA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.0   1.0   1.4e-31   2.4e-27       1      76 []      19     100 ..      19     100 .. 0.96

  Alignments for each domain:
  == domain 1  score: 95.0 bits;  conditional E-value: 1.4e-31
        BolA   1 LtealkpehlevedeShkhagha.....eaggetHFkvvivseaFegkslvarhRlvyalLkeelakgiHALslk.tktpee 76 
                 L+++l++ ++e++++S+kha+ha     e+++etHF+++i+s++F+g+++varhRlvy+ Lk+e+++g+HAL+++ +ktp+e
  EPX74438.1  19 LSKKLEANKIELYNDSDKHAHHAamkslEDKNETHFRLNIISPKFSGLTRVARHRLVYSSLKDEFENGLHALQITsAKTPQE 100
                 6799*******************99999889*******************************************87999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       933  (0.0520386); expected 358.6 (0.02)
Passed bias filter:                      524  (0.0292264); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.22s 00:00:00.59 Elapsed: 00:00:00.36
# Mc/sec: 860.16
//
Query:       EPX74439.1  [L=770]
Description: transcription factor TFIIH complex subunit Rad15 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.7e-58  197.2   0.7      5e-58  195.6   0.1    2.0  2  DEAD_2        DEAD_2
    9.7e-46  155.9   0.9    2.6e-42  144.7   0.3    2.4  2  HBB           Helical and beta-bridge domain
    2.5e-42  145.0   0.0    6.9e-42  143.5   0.0    1.8  1  Helicase_C_2  Helicase C-terminal domain
    0.00027   21.0   0.1       0.02   14.9   0.0    2.6  2  ResIII        Type III restriction enzyme, res subunit
  ------ inclusion threshold ------
      0.014   15.2   0.0        1.6    8.5   0.0    2.6  2  DEAD          DEAD/DEAH box helicase
      0.026   14.3   0.0      0.069   12.9   0.0    1.7  1  AAA_11        AAA domain
      0.044   12.4   0.2       0.07   11.7   0.2    1.2  1  Zw10          Centromere/kinetochore Zw10
      0.088   12.4   0.1       0.34   10.5   0.1    2.0  1  YtxC          YtxC-like family


Domain annotation for each model (and alignments):
>> DEAD_2  DEAD_2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  195.6   0.1   2.3e-61     5e-58       1     176 []      71     255 ..      71     255 .. 0.97
   2 ?   -0.9   0.1       0.5   1.1e+03       2      25 ..     258     281 ..     258     296 .. 0.72

  Alignments for each domain:
  == domain 1  score: 195.6 bits;  conditional E-value: 2.3e-61
                 EEESSHHHHHHHHHHHHHHHHHCHH....HS---EEEE--CCCC-SCHHCCCHHCCCCHHHHHHHHHCCHHCCH......TTTTTT-SCCCCHHHHHHH CS
      DEAD_2   1 ycsRThsqleqvvkelkklesykkk....kekvkvviLgSRknlCineevkkekkekavneaCkelkkkkaeek......eekCsffenleelkklkkl 89 
                 ycsRT+s+++++++elk+l++y+++    +e ++ ++L+SRknlC++++v++ek+++ v+++C+++++  ++e+      ++ C+f+enle+l+  ++l
  EPX74439.1  71 YCSRTMSEIDKALAELKRLMQYRTSqlgyEEPFLGLGLSSRKNLCLHPSVRREKNGNVVDARCRSMTAGFVKEQkqagmdVQLCDFHENLEDLEP-HSL 168
                 9***********************8889999**************************************99998999**9999*******99998.8** PP

                 HHHC---CHHHHHHHHHCT--HHHHHHHHHCCTSEEEEEHHHHTSCCCHHHHHT..GCGCEEEECTCCCHHHHHHHCC-EEEECHHH CS
      DEAD_2  90 lleevvdiedlvelgeklklCPYylsrelledadiiilpYqyLldekireslkgislknsivilDEAhNiedvceeaasveiseesl 176
                 ++++v++++d++++g+k+  CPY+++r++l+++++ii++Y+yLld+ki+e++++  +k++iv++DEAhNi++vc+e++s++++++sl
  EPX74439.1 169 VPNGVWTLDDITDYGTKHVRCPYFTVRRMLPFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNIDNVCIESLSIDLTDSSL 255
                 *****************************************************7779**************************9886 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.5
                 EESSHHHHHHHHHHHHHHHHHCHH CS
      DEAD_2   2 csRThsqleqvvkelkklesykkk 25 
                 ++R ++ leq v+e+k+  + k +
  EPX74439.1 258 ATRGVQALEQKVNEVKQSDAKKLQ 281
                 5899999*********98654443 PP

>> HBB  Helical and beta-bridge domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.7   0.3   1.2e-45   2.6e-42       2     189 ..     269     411 ..     268     412 .. 0.99
   2 !    9.2   0.0   0.00038      0.86     118     161 ..     429     473 ..     425     484 .. 0.81

  Alignments for each domain:
  == domain 1  score: 144.7 bits;  conditional E-value: 1.2e-45
                 CHCHCCCCHHCCCCCCCHHHHHHHHHCCCCHHHHSTTTECCHCHHHHHCHCHHHCHHHHHHHHHHHHHHHHHHHCCHHCCCTCC-SHHHHHHHHHHHHH CS
         HBB   2 ikeaketdepklqdeysrLvegLreaeeereeeyvleeepilpdeileeavpglirsaehflsllkrlveygkarreekieksesPrsflsrlaeflla 100
                 ++e+k++d++klqdey++Lv gL+ a+ +++ee+++++ p+lp+++l+eavpg+ir+aehf+++lkr+vey+k+r+++ +++ e+P+sfl++++     
  EPX74439.1 269 VNEVKQSDAKKLQDEYQKLVSGLQGANTASDEEQFMSN-PVLPEDLLQEAVPGNIRRAEHFVAFLKRFVEYLKTRMKVLHVIAETPTSFLQHVK----- 361
                 79************************************.*******************************************************..... PP

                 HHTS.TTTEEEEEE.STT.EECCCCS-TCCHHHHHHHCHCCCCCCTS-SSHHHHHHHHT....EEE.S..S.GGHCCCCCCCCCSHTCC CS
         HBB 101 wlssdeedYvrlvskeegesLeavcldPskalrflkerlssllmsgtltpleeysdiiGleaklkkfpspfpkEnlivlfatdVsTkyk 189
                                      +++++d +k+lrf++erl sl+++++++ +++++++                 +++++fat+VsT++ 
  EPX74439.1 362 ---------------------DLTFID-AKPLRFCAERLNSLVRALQIAAVDDFQSL-----------------QQVATFATLVSTYER 411
                 .....................******.*****************************.................*************87 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00038
                 T.EECCCCS-TCCHHHHHHHC.HCCCCCCTS-SSHHHHHHHHT.. CS
         HBB 118 gesLeavcldPskalrflker.lssllmsgtltpleeysdiiGle 161
                 ++ L+ +cld + a++++ +r +s++++sgtl+pl+ y +++ ++
  EPX74439.1 429 NPILHFSCLDAAIAIKPVFDRfRSVIITSGTLSPLDMYPKMLQFN 473
                 688999****99999988766267899***********9986665 PP

>> Helicase_C_2  Helicase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.5   0.0   3.1e-45   6.9e-42       2     170 ..     524     698 ..     523     699 .. 0.92

  Alignments for each domain:
  == domain 1  score: 143.5 bits;  conditional E-value: 3.1e-45
  Helicase_C_2   2 lellevvpggvlvffpSyklleevverlkeel....eskkieifvee.keesrekvleeykek..kkkgaillavcrGklsEGidfsddllraviiv 91 
                   +e++++vp+g ++ffpSy +le++v+ +++ +     +k + i+ve+ + ++++  le+y+++  +++ga+ll+v+rGk+sEG+df  +++ravi++
    EPX74439.1 524 IEYSKIVPDGLVAFFPSYLYLESIVSSWQSMGildeVWKYKLILVETpDPHETTLALETYRAAcsNGRGAVLLSVARGKVSEGVDFDHHYGRAVIMF 620
                   68899*************************884443444447777766888999999****9556******************************** PP

  Helicase_C_2  92 glPfpnpkdpeveakreyldekgkknsgkewylpealravnQaiGRliRhkdDygaivllDeRfakeeireklpkwlre 170
                   g+P++ +++  ++a+ e+l+++ +  +  ++ + +a+r   Q++GR++R kdD+g++vl D+R+ +++ r klpkw+++
    EPX74439.1 621 GIPYQYTESRILKARLEFLRDTYQ-IREADFLTFDAMRHAAQCLGRVLRGKDDHGIMVLADKRYGRSDKRTKLPKWIQQ 698
                   ************************.999*************************************************96 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   8.9e-06      0.02      14      63 ..      27      74 ..      16     127 .. 0.78
   2 ?    2.9   0.2     0.045     1e+02     130     145 ..     224     239 ..     201     273 .. 0.71

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 8.9e-06
                HHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESS CS
      ResIII 14 nlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkeekflflvpr 63
                +l+ +l+      +l++m+ GtGKT+ +++li +++++++e + l+ + r
  EPX74439.1 27 DLKHSLD--AGGAALLEMPSGTGKTISLLSLIISYQSHYPEHRKLIYCSR 74
                5555553..455789**********************9999876665555 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.045
                 TTT-SEEEEETGGGTT CS
      ResIII 130 rdrfdviiiDEaHrlg 145
                  ++  ++++DEaH++ 
  EPX74439.1 224 LSKDCIVVFDEAHNID 239
                 33334899*****976 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.0   0.00071       1.6      13      74 ..      34      93 ..      20     129 .. 0.83
   2 ?    3.9   0.0     0.018        41     104     135 ..     207     240 ..     192     272 .. 0.73

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00071
                TTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTS CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 13 gggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyi 74
                 gg  l++++ G+GKT   l  +++  +  +  ++ k ++ + t + + + l +lk++++y 
  EPX74439.1 34 AGGAALLEMPSGTGKTISLLSLIISYQS--HYPEHRKLIYCSRTMSEIDKALAELKRLMQYR 93
                688999************8888885544..58888899999999999999999999999973 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.018
                 EHHHHHHHH..HCTSSHCTTEEEEEEETHHHHHH CS
                 xxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 104 tpgrlddll..stgklnlsqvrflVlDEadrlld 135
                     l+d    ++ + +ls+  ++V+DEa+++ +
  EPX74439.1 207 SYHYLLDPKiaERVSKELSKDCIVVFDEAHNIDN 240
                 55555552223555556999999*******9876 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   3.1e-05     0.069      10     117 ..      28     133 ..      20     306 .. 0.63

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 3.1e-05
      AAA_11  10 iksalseseitliqGPPGtgKTktivellsqllsrrkseeeksakpriLvCapSNaAvDellerllr.glldsegekykpkivRvgnee...eriseav 104
                 +k+ l   + +l++ P GtgKT  +++l+ +       + +  +++++ +C+ +   +D+ l+ l r   ++++   y+  ++ +g ++      +++v
  EPX74439.1  28 LKHSLDAGGAALLEMPSGTGKTISLLSLIISY------QSHYPEHRKLIYCSRTMSEIDKALAELKRlMQYRTSQLGYEEPFLGLGLSSrknLCLHPSV 120
                 47788888899***********9999999999......23567889999**************999955555556666666776666665553345555 PP

      AAA_11 105 ksvsleekvekrl 117
                 ++ +  + v++r+
  EPX74439.1 121 RREKNGNVVDARC 133
                 5554444444444 PP

>> Zw10  Centromere/kinetochore Zw10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.2   3.1e-05      0.07      16     160 ..     262     411 ..     251     425 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 3.1e-05
        Zw10  16 isklekkveeikeevskmivkkYseflelsssaeellerveslskeidalkkkveneieqdlkaaveelaelkqqlkekevvlellealkkieea.lee 113
                 ++ le+kv+e+k++  k+++++Y+ ++   + a+   ++ + +s+ + +    +++ +  +++ a   +a lk+ ++  +  +++l+ + +  +  l+ 
  EPX74439.1 262 VQALEQKVNEVKQSDAKKLQDEYQKLVSGLQGANTASDEEQFMSNPV-LPEDLLQEAVPGNIRRAEHFVAFLKRFVEYLKTRMKVLHVIAETPTSfLQH 359
                 788*******************************9999999998887.567778889999999999999*********************997761566 PP

        Zw10 114 lkea..lknkaflvaadlleelksll...dlekvekafqlkilkalrkelsv 160
                 +k    +  k  +++a++l+ l   l   ++ + + ++q+  +++l + +++
  EPX74439.1 360 VKDLtfIDAKPLRFCAERLNSLVRALqiaAVDDFQSLQQVATFATLVSTYER 411
                 66431146789**********9999944433344444456666666666665 PP

>> YtxC  YtxC-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.1   0.00015      0.34     117     147 ..     326     356 ..     321     376 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00015
        YtxC 117 qeFiklLkyfveiqepkielvhvvieengef 147
                 + F+  Lk fve  +++++++hv+ e+  +f
  EPX74439.1 326 EHFVAFLKRFVEYLKTRMKVLHVIAETPTSF 356
                 78**********************9665544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (770 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       825  (0.0460148); expected 358.6 (0.02)
Passed bias filter:                      609  (0.0339673); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.71u 0.25s 00:00:00.96 Elapsed: 00:00:00.42
# Mc/sec: 5537.51
//
Query:       EPX74440.1  [L=704]
Description: CMGC/CLK protein kinase Lkh1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      1e-47  162.8   0.0    1.4e-47  162.3   0.0    1.2  1  Pkinase          Protein kinase domain
    8.5e-19   67.8   0.0    1.3e-18   67.3   0.0    1.2  1  Pkinase_Tyr      Protein tyrosine kinase
     0.0051   15.8   0.6     0.0076   15.3   0.6    1.1  1  Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase
  ------ inclusion threshold ------
       0.15   11.4   0.0       0.24   10.7   0.0    1.3  1  Kdo              Lipopolysaccharide kinase (Kdo/WaaP) family
       0.18   11.6   0.0       0.33   10.7   0.0    1.3  1  DUF3025          Protein of unknown function (DUF3025)


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  162.3   0.0   3.8e-51   1.4e-47       1     264 []     375     696 ..     375     696 .. 0.82

  Alignments for each domain:
  == domain 1  score: 162.3 bits;  conditional E-value: 3.8e-51
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEE...CHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS.. CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkik...kekakkkkekkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgs.. 94 
                 y++++ lG+G+fGkV++++++ +gk+vA+K+ +   k ++ +  e +vl+ i+    ++ ++ ++l+++f   +++++v+++    +++d+l+++    
  EPX74440.1 375 YTVIRLLGHGTFGKVIQCYDQVQGKHVAIKVTRaipKYREASLIELRVLQTIAQNDPTNENKCIELKDYFDYRKHICIVTDLFG-WSVFDFLKNNNYip 472
                 78899*************************86611144444444456666666666667999********************98.55999999554425 PP

                 --HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEET...................TTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHHTTSCB CS
     Pkinase  95 lseeeakkiakqilegleylHskgiiHrDlKpeNiLide...................kgelKitDFGlakelessskltsfvgtseYlAPEvlkeney 174
                 +s  +++++a+q+++++++lH+ g++H DlKpeN+L+ +                   + e++++DFG a+  ++ +  +s+v t++Y+APE++ + + 
  EPX74440.1 473 FSLLHIQSLAHQLFKSVAFLHEIGLVHTDLKPENVLLVSnasknvrlpyrnysqkilnNTEIRLIDFGSATFEDEYH--SSVVSTRHYRAPEIILGVGW 569
                 8888*********************************965888888888888777776666*********9988865..9******************* PP

                 SHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCT....SHH...HHHTTS.................................... CS
     Pkinase 175 skkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilg....etkeklpeasei.................................... 233
                 s ++D+WslG+i++el+tg+ +f+ ++++e + ++++      k++g    + + + +                                         
  EPX74440.1 570 SYPCDIWSLGCIIVELFTGQALFQTHEDNE-HLAMME------KVIGpfnyD-SISRAG---Rstqrffrtngsvkypmsntpkksiayveslqsldql 657
                 ************************666655.333333......455533221.111111...122456777788899999999**************** PP

                 ........-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 234 ........seeakdllkkllkkdpkkRltaeellqhpyl 264
                            ++dll+k++ +dp kR+ta+e+l hp++
  EPX74440.1 658 fscttssgVALLLDLLRKIFVYDPAKRITAKEALWHPFF 696
                 *****87777889************************98 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.3   0.0   3.6e-22   1.3e-18       3     219 ..     377     605 ..     375     610 .. 0.85

  Alignments for each domain:
  == domain 1  score: 67.3 bits;  conditional E-value: 3.6e-22
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS.-.....BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHH CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkkl.k.....hpnivkllgvctkeepllivteyvkgGdLlkfLrk 94 
                  + + lG+G+fGkV++++ +     +  +Va+K+ ++  +   +e+ l e+++++++ +      ++ ++l      +++++ivt++    ++ +fL++
   EPX74440.1 377 VIRLLGHGTFGKVIQCYDQ----VQGKHVAIKVTRAIPK--YREASLIELRVLQTIaQndptnENKCIELKDYFDYRKHICIVTDLFGW-SVFDFLKN 467
                  5688***********9988....88999*****965444..45677777888877643111114578888888889999******9976.7789**** PP

                  TCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE...................TTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS- CS
  Pkinase_Tyr  95 kekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse...................nkvvkisDfGLardiekddeyvkkeeaklpvkWma 173
                  ++  +++l ++ s+a+q+ k +++L++  lvH dl   NvLl +                   n+ +++ DfG a      dey++  +     ++ a
   EPX74440.1 468 NNYIPFSLLHIQSLAHQLFKSVAFLHEIGLVHTDLKPENVLLVSnasknvrlpyrnysqkilnNTEIRLIDFGSATFE---DEYHS--SVVSTRHYRA 560
                  *****************************************9999*****************999********88765...55543..445566899* PP

                  HHHHHHSEEEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHHH CS
  Pkinase_Tyr 174 pEslkekkftsksDvWsfGvllwEiftlgespypglkneevleklk 219
                  pE++     +   D+Ws G ++ E+ft g+  +++ +++e l++++
   EPX74440.1 561 PEIILGVGWSYPCDIWSLGCIIVELFT-GQALFQTHEDNEHLAMME 605
                  ***************************.999999998888777665 PP

>> Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.6   2.1e-06    0.0076     269     342 ..     463     540 ..     453     553 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 2.1e-06
  Pox_ser-thr_kin 269 GfaslveyikfifLqiaLLyikiyelpd...cenflhvDlkPdniLifds.kekliikvkerkyvfkepvklaLnDfD 342
                       f  +++yi f +L i  L  ++++  +       +h+DlkP+n+L+  + ++++++ +++ +    ++  + L Df 
       EPX74440.1 463 DFLKNNNYIPFSLLHIQSLAHQLFKSVAflhEIGLVHTDLKPENVLLVSNaSKNVRLPYRNYSQKILNNTEIRLIDFG 540
                      577999********9999888777654311145689*********999886888999999988887788888888885 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   6.8e-05      0.24     122     158 ..     480     516 ..     448     540 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 6.8e-05
         Kdo 122 allkavgrliaklhragvnHadlyaknillqqeeeee 158
                  l +++ + +a lh++g+ H+dl + n+ll  +++++
  EPX74440.1 480 SLAHQLFKSVAFLHEIGLVHTDLKPENVLLVSNASKN 516
                 566788888999*****************98887544 PP

>> DUF3025  Protein of unknown function (DUF3025)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   9.3e-05      0.33     115     170 ..     376     428 ..     345     440 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 9.3e-05
     DUF3025 115 ievvvfGHallekllqpykaltakalvveveeevfalsaaeqaaevdallaeelee 170
                 + ++++GH+++ k++q y ++ +k ++++v++++    + ++a+ ++ ++++++++
  EPX74440.1 376 TVIRLLGHGTFGKVIQCYDQVQGKHVAIKVTRAIP---KYREASLIELRVLQTIAQ 428
                 556799*************************8665...555566778888888863 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (704 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       455  (0.0253779); expected 358.6 (0.02)
Passed bias filter:                      277  (0.0154498); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.61u 0.26s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 4795.52
//
Query:       EPX74441.1  [L=788]
Description: 3'-tRNA processing endonuclease Trz2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.9e-21   73.5   0.1    4.2e-20   71.2   0.0    2.2  2  Lactamase_B_4  tRNase Z endonuclease
    7.5e-13   48.4   0.0    1.4e-12   47.5   0.0    1.5  1  Lactamase_B_2  Beta-lactamase superfamily domain
    0.00099   19.2   0.1     0.0045   17.0   0.1    2.1  1  Lactamase_B    Metallo-beta-lactamase superfamily
  ------ inclusion threshold ------
       0.13   12.2   0.0       0.69    9.9   0.0    2.2  2  Caf4           CCR4-associated factor 4


Domain annotation for each model (and alignments):
>> Lactamase_B_4  tRNase Z endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.2   0.0   9.3e-24   4.2e-20       1      54 [.      16      70 ..      16      74 .. 0.97
   2 ?   -1.9   0.0       0.6   2.7e+03      18      28 ..     420     430 ..     417     432 .. 0.82

  Alignments for each domain:
  == domain 1  score: 71.2 bits;  conditional E-value: 9.3e-24
  Lactamase_B_4  1 qvvttptsDtsg.PlllLqldskrYlfGkvgEgtQRavneqkvrlsklesiFLtg 54
                   q++t  + Dts  P+++L++dskrY+fG++gEg+QRa+ +q+++lsk++++FL++
     EPX74441.1 16 QFLTVNSRDTSViPCVHLFFDSKRYIFGSIGEGCQRAILSQQLKLSKIKDVFLCH 70
                   799**************************************************97 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.6
  Lactamase_B_4  18 qldskrYlfGk 28 
                    ++++ +++fGk
     EPX74441.1 420 ACPKMKFMFGK 430
                    68899*****8 PP

>> Lactamase_B_2  Beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.5   0.0   3.2e-16   1.4e-12       1     201 []     525     735 ..     525     735 .. 0.76

  Alignments for each domain:
  == domain 1  score: 47.5 bits;  conditional E-value: 3.2e-16
                    SEEEES--TTHHHHHTCGGS--S.SS--..SEEEEE-SS--HHHHGGGGCCCC......C--EE..EEEEEEHHHHHHCCTTCGHHHCHTT..TTE CS
  Lactamase_B_2   1 rriLiDagpdlrqqalralqPve.lrdelppidaVllthaHyDHlaglltlre......lrpkk..lplyapkgvlavleanfvylaleee..pav 85 
                    ++iL+D+g ++++ ++r+   +  l de++ +  + ++h H+DH ag+  + +      ++  +  l ++ap++  + l++ ++ + l+     ++
     EPX74441.1 525 NNILLDCGEGTLGRLARQY--GDsLNDEISLLRWIYISHMHADHHAGVIGVLKlwfsisTT--SskLFICAPPQFESWLKDYSKLDKLDLSriVFL 616
                    59********999966666..66699***************************88875433..3336677****************9999966333 PP

                    EEEEE-TTSEEEE..........CSTTEEEEEEEE-EE--CTCCE-TTTSEEEEEE...CTTEEEEEESS-S---HHHHHHHCT-SEEEEE-S-SS CS
  Lactamase_B_2  86 nvheldwgesfel..........gdggleitatparhksgrrldrnagdtlGlrie...gggkrvyyigDtgyipeeigerlggadllllditaye 168
                    +   +  + +++           +  +l++t ++                ++++++   ++g +++y+gDt   + e  e  ++a ++++++t+ +
     EPX74441.1 617 SNSAVRRDRTLTDedlikyrlllQ--ELDLTSFE--------TVAAVHCPFSYCMQftgNEGWKIAYSGDTRPSE-EFIEIGKDATVVIHEATLED 701
                    333333344443322222233222..23333333........3344456999*99977777888********766.55668899*******99888 PP

                    TTHHHH.HHT---STSHHHHCTTSSSSEEEEESB CS
  Lactamase_B_2 169 ddemir.hmgHltpeeaveaaadlgakrlvliHi 201
                    + + i+ +  H+t +ea+++ + ++a+  +l+H+
     EPX74441.1 702 SMQEIAvRKQHSTYSEALRVGQLMNARSIILTHF 735
                    766666***************************7 PP

>> Lactamase_B  Metallo-beta-lactamase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.1     1e-06    0.0045      16     162 ..     525     688 ..     517     711 .. 0.65

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 1e-06
                  CEEEES--SCHHHHHHHHHHHHHTSGGGGEEEEE-SBSSHHHHTTGGGCTTHHCCEETCCEHH...HHCCHCHHHHHHHHHCCHH............. CS
  Lactamase_B  16 gviLiDtGtsteaaraalelaalglkpkdvdavilTHlHlDHiGglgglveatdvpvgavaee...apalfmeeaddaasrkgll............. 97 
                   +iL D+G +t   +a++   +l  ++  ++++ ++H+H+DH +g+ g+ + +   +   ++    ap  f+ +++d++  ++l+             
   EPX74441.1 525 NNILLDCGEGTLGRLARQYGDSLNDEISLLRWIYISHMHADHHAGVIGVLKLWFSISTTSSKLficAPPQFESWLKDYSKLDKLDlsrivflsnsavr 622
                  689***************************************99998888877655444444422233444444444444444446666666666666 PP

                  .TTCHCGCCEEEEETTTEECCCTEEEEEHECTTSTSCCEEEEEETTCCEEEECTTTSSHHCCCCCC CS
  Lactamase_B  98 .lagvsadkpdvdeeeldgnaggrralyvtggpghghghgvveygggkvlftGDallagetgridl 162
                   +++ ++ + +  ++ l++ ++   ++++ ++ + + +    +++g k++++GD+ +++e ++i++
   EPX74441.1 623 rDRTLTDEDLIKYRLLLQELDLTSFETVAAVHCPFSYCMQFTGNEGWKIAYSGDTRPSEEFIEIGK 688
                  655555555555555555555555555555555555555555566666666666666666666666 PP

>> Caf4  CCR4-associated factor 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0   0.00015      0.69      13      46 ..     379     412 ..     376     419 .. 0.94
   2 ?   -2.8   0.0       1.5   6.6e+03      23      35 ..     731     743 ..     730     752 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00015
        Caf4  13 nyaDsattfkiLahLDeeryPLPidaakkqLPsL 46 
                 ny  sa +   L  LDe+ +PL  +  ++ L sL
  EPX74441.1 379 NYTRSASAITALNMLDENTFPLGKNCYQESLDSL 412
                 9******************************998 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.5
        Caf4  23 iLahLDeeryP.LP 35 
                 iL h+  +ryP LP
  EPX74441.1 731 ILTHF-SQRYPkLP 743
                 77887.58999555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (788 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       487  (0.0271627); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.64u 0.24s 00:00:00.88 Elapsed: 00:00:00.40
# Mc/sec: 5870.72
//
Query:       EPX74442.1  [L=243]
Description: replication termination factor Rtf2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.4e-63  214.7   0.7    1.7e-63  214.5   0.7    1.1  1  Rtf2          Rtf2 RING-finger
    5.9e-07   29.2   0.4    0.00073   19.3   0.1    2.6  2  zf-Nse        Zinc-finger of the MIZ type in Nse subunit
     0.0034   17.4   5.2     0.0054   16.7   0.7    2.4  2  zf-RING_UBOX  RING-type zinc-finger
  ------ inclusion threshold ------
      0.025   14.9   0.4      0.064   13.6   0.4    1.7  1  zf-RING_2     Ring finger domain
      0.042   14.0   0.5        4.3    7.5   0.1    3.1  3  zf-UDP        Zinc-binding RING-finger
       0.06   13.3   3.1          3    7.7   0.1    2.4  2  TORC_M        Transducer of regulated CREB activity middle do


Domain annotation for each model (and alignments):
>> Rtf2  Rtf2 RING-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  214.5   0.7   5.7e-67   1.7e-63       1     235 [.       1     221 [.       1     243 [] 0.78

  Alignments for each domain:
  == domain 1  score: 214.5 bits;  conditional E-value: 5.7e-67
        Rtf2   1 mGnDGGsipkRdelvke..kkkkekvd.keeekearwklCaLsqepLkkPivadrlGkLYnkdavleaLldkskekslskaashikglkdvvelkltkn 96 
                 mGnDGGs+p+R+elvke  k ++ ++d k+++k++  ++C+++ ++L++Piv++ lG+LYnk ++l++Lld+s   s+++a  hi +lkdvve++ +++
  EPX74442.1   1 MGNDGGSLPTRNELVKEppKSRPLDIDlKRSLKQSEITQCSITGDNLSPPIVSCGLGRLYNKASILQMLLDRS---SVPEAPTHIHSLKDVVEVHAENE 96 
                 9****************7777777889*********************************************7...8*****************98877 PP

        Rtf2  97 pafeeskkdatkdtkeapfiCpltglemngktkfvalrkCGcVfsekalkevksevClvCgkeykeedviplnptkeelellkarleeekakkkkkkka 195
                 +            ++++ ++Cp+t++em++ ++f+++++CG+Vf+ +a++e+ +++C++C+++y++e++ip+np++e+ + l++rl    ++ k+++ +
  EPX74442.1  97 E------------ENKVSWVCPITRHEMSSAYQFAYIVPCGHVFEYSAVREFGEKNCFQCNAPYEQENIIPINPNGEQIQALSKRLLMLTKSGKSHSLN 183
                 4............5789********************************************************************99888887766654 PP

        Rtf2 196 kkkkkakakgskaeaeaaskssseas........esskagkkkekkke 235
                  kk ++k+k+++++ ++  +++s++                  ++ ++
  EPX74442.1 184 LKKVSKKHKNQEKKRKH--SKESDEVpsltfidsD--------SSLAK 221
                 44333322222222222..2222222123333221........22222 PP

>> zf-Nse  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0    0.0012       3.6      12      46 ..      38      72 ..      26      86 .. 0.85
   2 !   19.3   0.1   2.5e-07   0.00073       6      51 ..      97     144 ..      93     149 .. 0.90

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0012
                SB-TTTSSB-SSEEEESSS--EEEHHHHHHHCTTT CS
      zf-Nse 12 lkCPltlqpfeePvtskkCpHvFEreaIlelikrk 46
                ++C +t  ++  P+ s      +++ +Il+++  +
  EPX74442.1 38 TQCSITGDNLSPPIVSCGLGRLYNKASILQMLLDR 72
                58**************999************9433 PP

  == domain 2  score: 19.3 bits;  conditional E-value: 2.5e-07
                 XSSBXXSB-TTTSSB-SSEEEES...SS--EEEHHHHHHHCTTTS-EE- CS
      zf-Nse   6 eeerislkCPltlqpfeePvtsk...kCpHvFEreaIlelikrkktvkC 51 
                 ee+++s  CP+t++++   ++      C HvFE +a+ e+  +k++ +C
  EPX74442.1  97 EENKVSWVCPITRHEMSSAYQFAyivPCGHVFEYSAVREFG-EKNCFQC 144
                 56899***************9988889**********9996.8888888 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.3     0.055   1.7e+02       1      17 [.      40      55 ..      40      55 .. 0.88
   2 !   16.7   0.7   1.8e-06    0.0054       1      38 [.     105     144 ..     105     145 .. 0.80

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.055
  zf-RING_UBOX  1 CpIClelftdPlvlpCG 17
                  C+I  + ++ P +++CG
    EPX74442.1 40 CSITGDNLSPP-IVSCG 55
                  9**********.548*9 PP

  == domain 2  score: 16.7 bits;  conditional E-value: 1.8e-06
  zf-RING_UBOX   1 CpIClelft......dPlvlpCGHtFCreClwelskslegafkC 38 
                   CpI + +++        +v pCGH+F  + +    +++++ f+C
    EPX74442.1 105 CPITRHEMSsayqfaY-IV-PCGHVFEYSAV--REFGEKNCFQC 144
                   ******9996654321.34.9*********9..78999999998 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.4   2.1e-05     0.064       3      43 ..     105     144 ..     104     145 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 2.1e-05
   zf-RING_2   3 CpICleelssadsvl.llpCgHvfhreClerwlrssstCPlC 43 
                 CpI   e+ssa++   ++pCgHvf ++ ++++ +++  C  C
  EPX74442.1 105 CPITRHEMSSAYQFAyIVPCGHVFEYSAVREFGEKN--CFQC 144
                 999999999999955488*********999944444..8887 PP

>> zf-UDP  Zinc-binding RING-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0       0.2     6e+02       1      18 [.      30      47 ..      30      50 .. 0.88
   2 ?    1.9   0.0     0.085   2.5e+02      52      77 ..      74      99 ..      70     100 .. 0.89
   3 ?    7.5   0.1    0.0014       4.3      38      64 ..     124     152 ..     110     162 .. 0.78

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.2
      zf-UDP  1 kplkdlngqiCqiCgddv 18
                ++lk+++ + C i gd++
  EPX74442.1 30 RSLKQSEITQCSITGDNL 47
                57999999********86 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.085
      zf-UDP 52 sCPqCktrykrlkgsprvegdeeedd 77
                s P+  t+ + lk+  +v+ ++ee++
  EPX74442.1 74 SVPEAPTHIHSLKDVVEVHAENEEEN 99
                679999***************99986 PP

  == domain 3  score: 7.5 bits;  conditional E-value: 0.0014
      zf-UDP  38 crpcyeye..rkdgnqsCPqCktrykrlk 64 
                 c  ++ey   r  g+++C qC++ y++ +
  EPX74442.1 124 CGHVFEYSavREFGEKNCFQCNAPYEQEN 152
                 6677787633667************9865 PP

>> TORC_M  Transducer of regulated CREB activity middle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.1     0.001         3     106     132 ..       3      29 ..       1      49 [. 0.85
   2 ?    5.7   0.5    0.0043        13      36      91 ..     163     215 ..     137     234 .. 0.64

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.001
      TORC_M 106 nTGGsLPDLtnlhfpsPLptpLDpeea 132
                 n GGsLP   +l   +P + pLD + +
  EPX74442.1   3 NDGGSLPTRNELVKEPPKSRPLDIDLK 29 
                 88*********************9866 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0043
      TORC_M  36 ldge.krvllltvpkieenllevkkelkkqlweakkvqslssrpkscevpginifps 91 
                 +++  kr+l+lt +++  + l++kk  kk+  ++kk +      +s evp+     s
  EPX74442.1 163 IQALsKRLLMLTKSGK-SHSLNLKKVSKKHKNQEKKRKH---SKESDEVPSLTFIDS 215
                 2222477777777766.5668888887776666666666...478999999865443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (243 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1602  (0.0893524); expected 358.6 (0.02)
Passed bias filter:                      608  (0.0339115); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 1660.99
//
Query:       EPX74443.1  [L=204]
Description: CDP-diacylglycerol-inositol 3- phosphatidyltransferase Pis1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.6e-10   40.1   0.0    4.6e-10   40.1   0.0    2.6  2  CDP-OH_P_transf  CDP-alcohol phosphatidyltransferase


Domain annotation for each model (and alignments):
>> CDP-OH_P_transf  CDP-alcohol phosphatidyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.1   0.0   2.6e-14   4.6e-10      29      66 .]       7      44 ..       2      44 .. 0.91
   2 ?   -4.1   5.2         1   1.8e+04      20      20 ..     114     114 ..      46     183 .. 0.58

  Alignments for each domain:
  == domain 1  score: 40.1 bits;  conditional E-value: 2.6e-14
                     HHHHHHHHHHHHTTHHHHHHHHTT---HHHHHHHHHHH CS
  CDP-OH_P_transf 29 lailllliasltDalDGklARrlnqvstlGkllDslaD 66
                     ++ +l+l++sl+Da+DG+ AR+lnq++++G++lD + D
       EPX74443.1  7 YCTILYLFSSLLDAFDGWTARKLNQSTNFGAILDMVTD 44
                     5788999******************888*******998 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 1
                      G CS
  CDP-OH_P_transf  20 l 20 
                      +
       EPX74443.1 114 F 114
                      0 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       690  (0.0384851); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.28s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1507.08
//
Query:       EPX74444.1  [L=296]
Description: CMGC/CDK protein kinase Csk1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      4e-36  124.7   0.0    4.6e-36  124.5   0.0    1.0  1  Pkinase         Protein kinase domain
    1.3e-23   83.6   0.0    1.7e-23   83.3   0.0    1.1  1  Pkinase_Tyr     Protein tyrosine kinase
    8.4e-07   28.1   0.0    1.2e-06   27.6   0.0    1.1  1  Pkinase_fungal  Fungal protein kinase
    0.00095   19.2   0.1     0.0027   17.7   0.0    1.6  2  APH             Phosphotransferase enzyme family
    0.00095   18.6   0.0     0.0017   17.7   0.0    1.4  1  Kinase-like     Kinase-like
  ------ inclusion threshold ------
      0.018   14.4   0.0      0.039   13.3   0.0    1.5  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
      0.049   13.3   0.0      0.064   12.9   0.0    1.3  1  FTA2            Kinetochore Sim4 complex subunit FTA2
       0.12   13.0   0.0         14    6.3   0.0    2.8  3  MgtE_N          MgtE intracellular N domain
       0.17   11.4   0.1       0.45   10.0   0.0    1.6  2  YrbL-PhoP_reg   PhoP regulatory network protein YrbL


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.5   0.0   2.3e-39   4.6e-36       3     247 ..      12     281 ..      10     293 .. 0.85

  Alignments for each domain:
  == domain 1  score: 124.5 bits;  conditional E-value: 2.3e-39
                 EEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEE..SSEEEEEEE--TTEBHHHHHHHHSS--HHH CS
     Pkinase   3 kleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfee..kdelylvleyveggeladllerkgslseee 99 
                 ++e+l  G+ ++Vy +v+k+++  ++vK+ +++ ++  ++  ++r  +ilk+++hp+i rl+++f+e  ++ l+l++ey +   l ++l++   ls++ 
  EPX74444.1  12 QVEHLSDGTISEVYVGVNKRNNIAYVVKIQETRFKRPPHD--AVRGRNILKEIEHPHIQRLLGSFSEpsTSCLHLITEYQPFV-LSEILNK---LSKNV 104
                 6788999**********************99998888665..9************************54455679*****966.9999985...9**** PP

                 HHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEE.TTTEEEE-SGTTSEESSSSCS....BCTTTSCGGGS-HHHH.TTSCBSHHHHHHHHHHHHHHHHH CS
     Pkinase 100 akkiakqilegleylHskgiiHrDlKpeNiLid.ekgelKitDFGlakelesssk....ltsfvgtseYlAPEvl.keneyskkvDvWslGvilyellt 192
                   +i++q++ +l+yl ++gi+HrD+ p+N+L+  e+g   +tDF +a   +   +    l s++gts+Y+A E l + + y ++vD Ws G++++el++
  EPX74444.1 105 KINIVSQLADALQYLENNGILHRDIHPNNVLLAsEEGPAYLTDFSIAWSEKYPGDekeeLISQIGTSHYRAIETLfGCRTYRHEVDRWSFGILIAELFS 203
                 *********************************88888*******9866555444458899**************999********************* PP

                 SS-STTTSSHHHHHHHHHHTHHHHHHHCT.SHH...HHHTTS.......................-HHHHHHHHHHT-S CS
     Pkinase 193 gkppfsgekgkekvekeldqlekilkilg.etkeklpeasei.......................seeakdllkkllkk 247
                 g p+f  + ++e   +el+ + +i+++lg ++ e +pe  ++                       +++++++++kl+++
  EPX74444.1 204 GVPLFD-DGSSEGWPSELRLISNIFQTLGtPNLEMWPELANCpdwnkfifheyppkpwedilpnvDPTVRKVVSKLVNY 281
                 ******.555555778888899******976667778777777777777777777777777777777777777777665 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.3   0.0   8.3e-27   1.7e-23       3     200 ..      12     203 ..      10     216 .. 0.86

  Alignments for each domain:
  == domain 1  score: 83.3 bits;  conditional E-value: 8.3e-27
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEE..SSSSEEEEEE--TTEBHHHHHHHTCTT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvct..keepllivteyvkgGdLlkfLrkkeke 98 
                    ++l  G+ ++V+ g  k    ++++  +vK+ + + ++   ++ ++  +i+k+++hp+i +llg  +  +++ l ++tey +   L++ L+k    
   EPX74444.1  12 QVEHLSDGTISEVYVGVNK----RNNIAYVVKIQETRFKRP-PHDAVRGRNILKEIEHPHIQRLLGSFSepSTSCLHLITEYQPF-VLSEILNK---- 99 
                  678999**********999....899999****98777777.7889999********************544444999****887.57777766.... PP

                  TSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETT.EEEE-STTTHEET.TTSSEEEETTSSTSGGGGS-HHHHHHSE.EEHHHHHHHHHH CS
  Pkinase_Tyr  99 kltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenk.vvkisDfGLardi.ekddeyvkkeeaklpvkWmapEslkekk.ftsksDvWsfGv 193
                   l+ + +++++ q+A++++yLe++ ++Hrd+   NvLl++++  + ++Df +a +  +  de ++  ++    ++ a+E+l+ ++ + ++ D WsfG+
   EPX74444.1 100 -LSKNVKINIVSQLADALQYLENNGILHRDIHPNNVLLASEEgPAYLTDFSIAWSEkYPGDEKEELISQIGTSHYRAIETLFGCRtYRHEVDRWSFGI 196
                  .57778899*****************************975549********9877366667777777888899********98779*********** PP

                  HHHHHHT CS
  Pkinase_Tyr 194 llwEift 200
                  l+ E+f+
   EPX74444.1 197 LIAELFS 203
                  ******9 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   0.0     6e-10   1.2e-06     319     397 ..     116     189 ..      96     196 .. 0.82

  Alignments for each domain:
  == domain 1  score: 27.6 bits;  conditional E-value: 6e-10
  Pkinase_fungal 319 hrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesga.rertGTleFmaievlkgeeHsyrhDL 397
                     ++ L  + giLHrDi  nN+l+      +e    L D+ +a +++ +  e+++   ++GT  + aie l g   +yrh +
      EPX74444.1 116 LQYLE-NNGILHRDIHPNNVLLA----SEEGPAYLTDFSIAWSEKYPGDEKEElISQIGTSHYRAIETLFG-CRTYRHEV 189
                     45565.99***************....4577899*********9987666655589*************94.56777765 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.95   1.9e+03       3      34 ..      14      49 ..      12      73 .. 0.73
   2 !   17.7   0.0   1.4e-06    0.0027     156     193 ..     112     148 ..      83     151 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.95
                EEE--.SSCEEEEEEETT.-.-EEEEEE-TT..S-H CS
         APH  3 relsggasnrtylvttpa.g.ryvlrrnppa..raa 34
                + ls+g+++ +y  + ++    yv+++ +++  r++
  EPX74444.1 14 EHLSDGTISEVYVGVNKRnNiAYVVKIQETRfkRPP 49
                668899999888877777448999999877754333 PP

  == domain 2  score: 17.7 bits;  conditional E-value: 1.4e-06
                 HHHH--SSS-EEEE-SS-SGGGEEEC..TTEEEEE--- CS
         APH 156 laallpgelptvllHgDlhpgNllvdpddgrvtGviDf 193
                 la+ l+  +  ++lH+D+hp+N+l+ +++g+  ++ Df
  EPX74444.1 112 LADALQYLENNGILHRDIHPNNVLLASEEGPA-YLTDF 148
                 44444447889***************998886.88777 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   8.6e-07    0.0017     140     243 ..      99     201 ..      80     230 .. 0.72

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 8.6e-07
  Kinase-like 140 kletiarlllTlqlirlaanLqakglvhgkftvdnllld.ekgglmlggftaLvragtkvvlsevekgfaPpEllgsrgg..ytrknkt....kmthk 230
                  kl +  +  +  ql    ++L ++g++h +++++n+ll  e+g+ +l++f+  +  +  +         +  El+++ g+  y+  +++    ++ h+
   EPX74444.1  99 KLSKNVKINIVSQLADALQYLENNGILHRDIHPNNVLLAsEEGPAYLTDFSIAWSEKYPGD--------EKEELISQIGTshYRAIETLfgcrTYRHE 188
                  566666777778888999*****************9996378*********9887664444........33444444444444443332222267788 PP

  Kinase-like 231 ldaWqlGlviyri 243
                  +d W  G+ i  +
   EPX74444.1 189 VDRWSFGILIAEL 201
                  8888888877655 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0     2e-05     0.039     109     166 ..      97     148 ..      90     163 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 2e-05
         Kdo 109 lakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDl 166
                 l+k   l++++k +++ +++ + + l + g+ H+d+ + n+ll  ee     ++l D+
  EPX74444.1  97 LNK---LSKNVKINIVSQLADALQYLENNGILHRDIHPNNVLLASEE---GPAYLTDF 148
                 444...88999********************************9997...56666666 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   3.2e-05     0.064     164     215 .]      88     152 ..      11     152 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 3.2e-05
        FTA2 164 l.......ellkeqeelevsqlpkllrdlkklhklgIvvrDlkeenyi......dgkLvDlsaai 215
                 +        l k +++++++++++l + l+ l++ gI++rD++++n++         L D+s a+
  EPX74444.1  88 YqpfvlseILNKLSKNVKINIVSQLADALQYLENNGILHRDIHPNNVLlaseegPAYLTDFSIAW 152
                 355566656778899******************************98733321112466666665 PP

>> MgtE_N  MgtE intracellular N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0       0.1     2e+02      27      51 ..      90     114 ..      66     120 .. 0.66
   2 ?   -3.4   0.0       7.8   1.5e+04      75      86 ..     158     169 ..     150     179 .. 0.50
   3 ?    6.3   0.0    0.0073        14      70     101 ..     252     283 ..     246     284 .. 0.90

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.1
                 HHHHHHHHCTS-CCCCCHHHHCS-H CS
      MgtE_N  27 keeaaevleeldedlqeeliealsd 51 
                 +  ++e+l++l+ +++ +++++l d
  EPX74444.1  90 PFVLSEILNKLSKNVKINIVSQLAD 114
                 4455666666666666666666654 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 7.8
                 HHHHHHHHHCS- CS
      MgtE_N  75 eekveellsald 86 
                  +++eel+s++ 
  EPX74444.1 158 GDEKEELISQIG 169
                 334444444433 PP

  == domain 3  score: 6.3 bits;  conditional E-value: 0.0073
                 HCCCHHHHHHHHHHCS-HHHHHHHHHHCTS-T CS
      MgtE_N  70 leelpeekveellsaldeeereeieellsYpe 101
                 ++e p++  e +l++ d+  r+ + +l +Yp+
  EPX74444.1 252 FHEYPPKPWEDILPNVDPTVRKVVSKLVNYPN 283
                 6788888899********************96 PP

>> YrbL-PhoP_reg  PhoP regulatory network protein YrbL
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.83   1.7e+03       3      43 ..      10      47 ..       9      78 .. 0.62
   2 ?   10.0   0.0   0.00023      0.45     121     156 ..     105     140 ..      89     147 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.83
  YrbL-PhoP_reg  3 LsdekllakGteRlvyaHPedsakliKvvkpeeiaarrrrk 43
                   Ls+ ++l +Gt  +vy   +  + +  vvk +e   +r ++
     EPX74444.1 10 LSQVEHLSDGTISEVYVGVNKRNNIAYVVKIQE---TRFKR 47
                   677778888888888877777777766666666...22222 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00023
  YrbL-PhoP_reg 121 taelkeaLdefleelldnhivtndlsakNivvkkns 156
                    + ++ ++L + l++l +n i+ +d++++N++++ ++
     EPX74444.1 105 KINIVSQLADALQYLENNGILHRDIHPNNVLLASEE 140
                    335688999**********************98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (296 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       463  (0.0258241); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.46
# Mc/sec: 1946.27
//
Query:       EPX74445.1  [L=384]
Description: Erd1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-65  221.0  24.2    3.2e-65  220.7  24.2    1.0  1  EXS       EXS family


Domain annotation for each model (and alignments):
>> EXS  EXS family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  220.7  24.2   1.8e-69   3.2e-65       2     327 ..      15     381 ..      14     383 .. 0.84

  Alignments for each domain:
  == domain 1  score: 220.7 bits;  conditional E-value: 1.8e-69
         EXS   2 plpyrvlllvvlglllwalnlhvlsklginyalifeldp...........................r..sslsyrqlyelaalllllllllllllllsa 71 
                  lp+r+ ll++lg++lw l++h+++ l+ +   + +++                            +  ++ +y+  y + +++++ +l+ +ll++l++
  EPX74445.1  15 ALPFRIGLLFILGTWLWSLCCHYIYYLKKQDLEVYNARSrvrqssmmpsvnftdtrtdleqapiknSiiKRINYEAGYCFSTIIFISWLIGFLLFILNT 113
                 68********************999987666666666333444555556666666666666666552458888888888***********777777755 PP

         EXS  72 evd.....alellplllllllllllllplnilyrssrrrflrtllrillapla..pvefadfllaDiltSlakvlgDlaltvclya...sswsee.... 156
                 + d     ++ l+p l+++++++l+ +p+++ +r+ +r++ ++++r+++   a    + +dfll++i+tS+ak+lgD++++ c++    +   +     
  EPX74445.1 114 RGDvkglyMHPLYPTLWMITTVVLVAVPFPWRFRPVQRSLQNSIIRVFFLFHAnsYYPHKDFLLSEIFTSYAKMLGDFYVFGCVLKghiT---KYtlrp 209
                 5554555556699**********************************99443322445***************************74442...223334 PP

         EXS 157 drkcgsssvvvplllslPyliRfrQclreyrdtkkr...phllNalKYatafpvivlsalqrlsksd...esestl.rvlwllaalvnslysfiWDvtm 248
                 d kc+++ ++vpl++++P+++  +Q l+  ++ +k     +llNa+K+a+afp i+lsal+++++s+   +s++ + ++ w l+al+ns+y+f+WD   
  EPX74445.1 210 DLKCDGT-LFVPLIMTYPFIVATLQSLHYAVRHRKAalkISLLNAFKHALAFPLIYLSALMHAERSKfklSSNHGYlFWSWNLLALLNSVYTFCWDTYV 307
                 779*999.99********************9977666789***************************9997777777********************** PP

         EXS 249 DWgLlkllksknwflRdellypkkwvYylaivldlvlRftWslklsshlhsiqeselgvfllellEvlRRwvWvffRvE 327
                 DWg    +++     R++l +     Y+la +l+++lR+tWslkl+++l +++++e+g+f +e+lEv+RR +W +f+++
  EPX74445.1 308 DWGVKFPFEK--VPSRRCLPFV---AYFLAAILNFILRITWSLKLYPRLYQYHDYEMGMFSFEMLEVIRRNLWLLFHLD 381
                 ****966665..7789999665...5**************************************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (384 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       542  (0.0302304); expected 358.6 (0.02)
Passed bias filter:                      276  (0.0153941); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2703.24
//
Query:       EPX74446.1  [L=527]
Description: chaperonin-containing T-complex beta subunit Cct2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   1.8e-144  482.0  13.2   2.1e-144  481.8  13.2    1.0  1  Cpn60_TCP1   TCP-1/cpn60 chaperonin family
  ------ inclusion threshold ------
      0.093   12.3   0.0        0.2   11.2   0.0    1.5  1  CRM1_repeat  Chromosome region maintenance or exportin repeat


Domain annotation for each model (and alignments):
>> Cpn60_TCP1  TCP-1/cpn60 chaperonin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  481.8  13.2  2.3e-148  2.1e-144       3     490 ..      34     520 ..      32     521 .. 0.98

  Alignments for each domain:
  == domain 1  score: 481.8 bits;  conditional E-value: 2.3e-148
                 HHHHCCSSTTXXEEEEEE.TTSEEEEEXSHHHHHHCSXXXSHHHHHHHHHHHHCCCCCTTCHHHHHHHHHHHHHHHHHHHHCTXXHHHHHHHHHHHHHH CS
  Cpn60_TCP1   3 divkttlGPkGmdKmlvn.kggkvvvTnDGatilkeleiehPaakllveaaesqdeevGDGTttvviLageLleeaekliaagvhpttiiegyekalek 100
                 d+vk+tlGPkGmdK+l++   g++vvTnDGatilk + +++ aak+lv++++ qd+evGDGTt+v+++a+eLl++ae l+++++hp++ii+gy+  ++k
  EPX74446.1  34 DLVKSTLGPKGMDKILQSgTSGDIVVTNDGATILKAIALDNAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEILVNSKIHPQVIIDGYRIGAKK 132
                 89****************99******************************************************************************* PP

                 HHHHHHHHXEEBXSC.STT.HHHHHHHHHHCTTSSXXSTHHHHHHHHHHHHHCHCCCSEECSCCCEECCCCEECECTTSEEESEEEESS--SSTTSSCE CS
  Cpn60_TCP1 101 aleaLkeiaveisse.ekdreeLlkvartslsskltskeaeelsklvvdAvklieenekeldlgrikvvkieggsledselveGlvldkgvlspdmpkk 198
                 a+eaL++ +v+ s++ e  r++L ++a+t+lssk+ s+++++++kl+vdAv+ +++n   ++l++i+++ki gg++eds l eG++l+k++  + +pk 
  EPX74446.1 133 AIEALQASSVDNSKDpELFRQDLENIAKTTLSSKILSQSKDHFAKLAVDAVLRLKQN---INLDNIQIMKILGGKMEDSFLDEGFILNKNIGVN-CPKV 227
                 *****99988888887889********************************888766...******************************8876.9*** PP

                 EECEEEEEESS-BS--HHCC.HHHCCCCSCCHHHHHHHHHHHHHHHHHHHHHHTTECEEEESS-B-HHHHHHHHHCT-EEE-S--HHHHHHHHHHHT-- CS
  Cpn60_TCP1 199 lenakvllldvsLeiektet.kttvvlsdaeeleklekaeekqleellekiiksgvnvvvcqkgiddlalhflakngilalrrvkkkdlerlakatGat 296
                 +e+a++l+ +++++++k ++  + +++++  +l++le+ae+++++ ++e+i++++ n++++ + i +  ++++a++gi+ +++++ + +erl+ +tG++
  EPX74446.1 228 MEDANILIANTPMDTDKVKVfGARLRVDTTGKLAELERAEREKMKAKVERIKNHNINCFINRQLIYNWPEQLFADAGIMSIEHADFDGIERLSLVTGGE 326
                 *****************9987899*************************************************************************** PP

                 EBSCGGGGGCGC-EEEEEEEECCETTCCEEEEECESSSSXEEEEEEESTCCCHHHHHHHHHHHHHHHHHHHHHHEEEETTTCHHHHHHHHHHCCCCTSX CS
  Cpn60_TCP1 297 avssledltpeelGtakkveeekigsekttiieevksgkiatillrgatdtvldeieraiedAlnvvknaiedekvvpGGGatelelakklkeyaksvs 395
                 + s++e+++  +lG++k++ee  ig++k++ +++v+ g+++ti+lrgat ++lde+erai+dAl v++++i++++v +GGG++e+ +a++++e a + +
  EPX74446.1 327 IASTFEHPELVKLGHCKRIEEVIIGEDKMIKFSGVAAGEACTIVLRGATHQMLDEAERAIHDALAVLSQTITESRVTLGGGSAEMLMARAVEEAAAHEP 425
                 *************************************************************************************************** PP

                 CCHHHHHHHHHHHHTHHHHHHHHHCTSXHHHHHHHHHHHHHTTXTTEEEETTTTCEEECCCCTXEEEHHHHHHHHHHHHHHHHHHHCEEEEEXXX CS
  Cpn60_TCP1 396 geeqlaieafakALevipktLaeNaGldpievlaklraahnkgekelgidvesgeiidlveagvvDplkvkrqalksAteaastiLrideiikak 490
                 g++++a+ afakAL+++p +La NaG+d+ e++a+l+aah  g++++g+d+++gei d+ e+g++++lk k+ +++s +e a+++Lr+d i++a 
  EPX74446.1 426 GKRAIAVSAFAKALTQLPTILADNAGYDSSELVAQLKAAHYDGKTKMGLDMDKGEIADMSEKGILESLKLKQAVVSSGSEGAQLLLRVDTILRAA 520
                 *******************************************************************************************9985 PP

>> CRM1_repeat  Chromosome region maintenance or exportin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   2.2e-05       0.2       5      21 ..      75      91 ..      72      91 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 2.2e-05
                 HHHHHHHHHHHHHSHHH CS
  CRM1_repeat  5 aalqYLvkISeVedrEi 21
                 aa + Lv+IS+V+d+E+
   EPX74446.1 75 AAAKVLVNISKVQDDEV 91
                 67899***********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (527 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       764  (0.0426125); expected 358.6 (0.02)
Passed bias filter:                      538  (0.0300073); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.40
# Mc/sec: 3953.36
//
Query:       EPX74447.1  [L=511]
Description: autophagy associated protein Aut12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.3e-105  353.8  10.5   1.6e-105  353.5  10.5    1.0  1  Mon1      Trafficking protein Mon1


Domain annotation for each model (and alignments):
>> Mon1  Trafficking protein Mon1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  353.5  10.5  8.8e-110  1.6e-105       4     401 ..     110     507 ..     108     510 .. 0.97

  Alignments for each domain:
  == domain 1  score: 353.5 bits;  conditional E-value: 8.8e-110
                 H-SEEEEEEETTS-EEEESSS-HHHHHHHHHHHHHHHHHHH.HTT--EEEEEETTEEEEEEEETTEEEEEEE-.SS--HHHHHHHHHHHHHHHHHHHHH CS
        Mon1   4 kkkkhffilSsAGKPIYsrygseeklsslmGviqaivsffeenekdelksitagdtkfvflnkspliLvaisk.teesesqlrkqLellysqllsiLtk 101
                 ++k++++i++s+GKP++s+  +e+   s+++ +qai+s+fe   k++l ++++ +t +v  + +pl+Lv+is  t  s   ++++L+l y+q+ls++t+
  EPX74447.1 110 RQKRKYLIFTSSGKPVFSNVADENLEPSTVAALQAILSSFE-VLKEDLTYFETFSTIIVAYSAGPLYLVCISPlTTLSPDFMKNELRLFYHQILSTITS 207
                 689**************************************.59*****************************9999********************** PP

                 HHHHHHHHH-TT--TTTTTTT-HHHHHHHHHHHHHH-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        Mon1 102 sqleklfekrenfDLrrlLegtdelldslidkslelspslllsaleclklrkslRekinnillkakkkkllfgllvaenklvsvlrpkkhtlhpsDlql 200
                 ++++++++ r+nfDLrrl+++++++l+ l ++  +++p  +l+a++ l+lr s R++++++llk+k k+l+f+llv++++lv  ++++k  lh +D+ l
  EPX74447.1 208 KSISSILDSRPNFDLRRLIGSSEQFLKVLSSDLENYEPFSFLNAISPLPLRVSFRDQLSQLLLKEKPKSLIFALLVVQGRLVCAIKARKLMLHANDIYL 306
                 *******************************9999**************************************************************** PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXX CS
        Mon1 201 LfnlisssesfkaedeesWiPiCLpkFnsngflyayvkfleeekialvliSadkdaFfelkelkekiiekleksellkelkealsskklsvsdipipll 299
                 +f  ++++++f+ ++ e+W+PiCLp  n+n++ly+y +f+ ++++al+l S+++++Ff+l+ +++ +  +l ++ +lk++ +a++  + s ++ ++p +
  EPX74447.1 307 VFLSVFNTQAFN-DSMEHWVPICLPSLNPNAYLYIYSHFI-DHEVALILASNESSSFFDLQAMRNIVSMRLYERYWLKKILHAAELDQTSFRNPGFPCI 403
                 ************.79*************************.9***************************************99999999********** PP

                 XXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        Mon1 300 rHFiykskknvQfvmseleapyseeerkrllklYqklhasvhek...lkllyeesekltllawvtssfelYlvfnplvskkaliksankilkwikkeee 395
                  H++++skk++Qf+ + +   + +++ k+l+ +Y++lh++v ++   l++  e + +l+l++w+tssf++Y+++n + + + li+++nk+l+wi++ee+
  EPX74447.1 404 LHYLFYSKKYSQFYAPGY-RFNAKNNVKNLYAIYASLHDQVFHRkrsLSIDVEIHGSLMLFTWSTSSFNFYCLANANENLQILIANINKVLRWIRREES 501
                 ******************.33459999*************99776766899999999****************************************** PP

                 XXXXXX CS
        Mon1 396 rlFise 401
                 rlFi++
  EPX74447.1 502 RLFICT 507
                 ****86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (511 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       583  (0.0325172); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 3731.38
//
Query:       EPX74448.1  [L=249]
Description: hypothetical protein SOCG_01933 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-08   35.0   0.6    1.9e-08   35.0   0.6    2.5  4  Hep_59    Hepatocellular carcinoma-associated antigen 59


Domain annotation for each model (and alignments):
>> Hep_59  Hepatocellular carcinoma-associated antigen 59
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1      0.27   4.8e+03      82     101 ..      25      47 ..       7      53 .. 0.68
   2 ?   -2.1   0.2      0.37   6.6e+03      60      60 ..      68      68 ..      38      94 .. 0.52
   3 !   35.0   0.6     1e-12   1.9e-08       1     101 [.     105     201 ..     105     205 .. 0.60
   4 ?   -0.3   0.2       0.1   1.9e+03      31      50 ..     198     217 ..     187     243 .. 0.36

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.27
      Hep_59  82 IpEVdLgiea...klkNieetek 101
                 + E+dL  e    k++ i e  k
  EPX74448.1  25 LNEIDLEGEDsapKVRSILEDAK 47 
                 67888877765556666655444 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.37
      Hep_59 60 e 60
                +
  EPX74448.1 68 K 68
                1 PP

  == domain 3  score: 35.0 bits;  conditional E-value: 1e-12
      Hep_59   1 rFtkqtgkrdvdkhMekYIeeeLakrkgkskqeqeeeeekeseassksedaede...lyevpehlkvsskkeeeealsnqmlggIpEVdLgiea....k 92 
                 rF+k t+++dv++h+  YIe++++  k++ ++ ++e+e++++   +++  +e+    + ++p++++      ++         +IpEVd+gi +    +
  EPX74448.1 105 RFAKPTNEIDVNQHLLSYIESKINFDKQS-SHPSTEHENNAEVIPKRDAGHEKAptiVSDLPNKVQ------NNSI----ASDAIPEVDVGITSteleS 192
                 7***********************97755.222222222222222222222222333445554433......2333....4679********9865555 PP

      Hep_59  93 lkNieetek 101
                  kN +  +k
  EPX74448.1 193 SKNSASKRK 201
                 566555555 PP

  == domain 4  score: -0.3 bits;  conditional E-value: 0.1
      Hep_59  31 kqeqeeeeekeseassksed 50 
                 ++++++  +k++ +s++s+ 
  EPX74448.1 198 SKRKRKGLNKTNPTSTRSSA 217
                 22222222222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       858  (0.0478554); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1813.63
//
Query:       EPX74449.1  [L=339]
Description: GRASP protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-55  187.5   0.1    1.4e-47  161.5   0.0    2.2  2  GRASP55_65  GRASP55/65 PDZ-like domain
  ------ inclusion threshold ------
      0.034   14.5   0.0       0.22   11.9   0.0    2.1  2  PDZ_2       PDZ domain
      0.054   13.4   0.0       0.25   11.2   0.0    2.2  2  PDZ_6       PDZ domain


Domain annotation for each model (and alignments):
>> GRASP55_65  GRASP55/65 PDZ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.5   0.0   3.1e-11   1.9e-07      36     112 ..      20      96 ..      13      98 .. 0.94
   2 !  161.5   0.0   2.3e-51   1.4e-47       1     137 [.      80     214 ..      80     215 .. 0.97

  Alignments for each domain:
  == domain 1  score: 31.5 bits;  conditional E-value: 3.1e-11
                 E-TTTTTS-EEEEEEBTTSHHHHHT--TTTEEEEEEE.SSSSSTSCSHHHHTTTSSS-EEEEEEETTTTEEEEEEE- CS
  GRASP55_65  36 slekaaeevwhvldvlegsPaakagLvpksDYiiGldkgllkgeedlselveaheekelkLlvYnsesdevrevtvk 112
                 + ++a e+ ++vl+++e+s aa+ag+  + D+i +++  ll+g+  +++ +    + e++L v+  + ++ r+v ++
  EPX74449.1  20 HHDSAEEYGFRVLKIQENSLAANAGIESYYDFITAINGILLNGDPLMFRSLLRDSSPEITLEVFSLKGQIARKVKIN 96 
                 6677999*******************************************************************997 PP

  == domain 2  score: 161.5 bits;  conditional E-value: 2.3e-51
                 EEEEETTT--EEEEEE---SSSSSSSSSSEEEEEEE-TTTTTS-EEEEEEBTTSHHHHHT--TTTEEEEEEE.SSSSSTSCSHHHHTTTSSS-EEEEEE CS
  GRASP55_65   1 levysaksqklrevslvpskewggqgllGlslrlaslekaaeevwhvldvlegsPaakagLvpksDYiiGldkgllkgeedlselveaheekelkLlvY 99 
                 lev+s+k+q  r+v++  s++  +q +lG++l++as+++a + vwh+l+v+e+sP a a+++p++DYi+G+++g+++ge++l +l+e+h +++l+L++Y
  EPX74449.1  80 LEVFSLKGQIARKVKINVSNA--EQDKLGMTLQWASIHSAIDAVWHILNVIENSPIALAKVIPYQDYIVGTPEGMMTGEKALADLIETHLNRPLRLYIY 176
                 79**************66555..799************************************************************************* PP

                 ETTTTEEEEEEE---TTSSSSTTTSEEEE-SGGGS--- CS
  GRASP55_65 100 nsesdevrevtvkpsrewGgegalGcdvgyGlLhriPe 137
                 n+ +d++r++t++p+r+wGg+ga+Gc+vg+G+Lhr+P+
  EPX74449.1 177 NQYQDNTRQITIVPKRNWGGDGAIGCGVGHGALHRLPA 214
                 *************************************7 PP

>> PDZ_2  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   3.7e-05      0.22      14      66 ..      27      81 ..      16     104 .. 0.75
   2 ?   -0.2   0.0      0.21   1.3e+03      18      40 ..     124     147 ..     112     188 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 3.7e-05
                .-EEEEEE-TTSGGGGT.--T.T-EEEEETTB--SSHHHHH.HHHHTS-TT-EEE CS
       PDZ_2 14 ggvlvvsVkeggPaakaglka.gDvilkvdgkkvksledli.slllkkkpGdtVk 66
                 g  v +++e++ aa+ag+++ +D i++++g  ++ ++ +  sll+  +p  t++
  EPX74449.1 27 YGFRVLKIQENSLAANAGIESyYDFITAINGILLNGDPLMFrSLLRDSSPEITLE 81
                4899***************9978********999766544414444666665555 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.21
                 EEEE-TTSGGGGT..--TT-EEEE CS
       PDZ_2  18 vvsVkeggPaakag.lkagDvilk 40 
                 + +V e++P a a+ +  +D i+ 
  EPX74449.1 124 ILNVIENSPIALAKvIPYQDYIVG 147
                 789999999999986777787765 PP

>> PDZ_6  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   4.2e-05      0.25       1      50 [.      30      79 ..      30      83 .. 0.82
   2 ?   -3.0   0.0       1.1   6.8e+03      37      52 ..     158     173 ..     155     175 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 4.2e-05
       PDZ_6  1 vVtaVdpgsPAdrAGlrv.GDiilsvNGqpveglsladvaallrgsagesv 50
                +V  ++++s A++AG++   D i+++NG+ +  +++  +++llr s +e++
  EPX74449.1 30 RVLKIQENSLAANAGIESyYDFITAINGILL-NGDPLMFRSLLRDSSPEIT 79
                577899**********9846**********9.7788888888886666655 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.1
       PDZ_6  37 dvaallrgsagesvvl 52 
                  +a+l++++ +++++l
  EPX74449.1 158 ALADLIETHLNRPLRL 173
                 5899999999999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (339 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       534  (0.0297841); expected 358.6 (0.02)
Passed bias filter:                      469  (0.0261587); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.31s 00:00:00.84 Elapsed: 00:00:00.48
# Mc/sec: 2119.58
//
Query:       EPX74450.1  [L=762]
Description: intermediate peptidase Oct1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   3.9e-135  451.6   0.0   4.9e-135  451.3   0.0    1.1  1  Peptidase_M3   Peptidase family M3
  ------ inclusion threshold ------
      0.077   13.3   0.0       0.16   12.2   0.0    1.5  1  Peptidase_M91  Effector protein


Domain annotation for each model (and alignments):
>> Peptidase_M3  Peptidase family M3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  451.3   0.0  5.5e-139  4.9e-135       3     457 ..     275     748 ..     273     749 .. 0.96

  Alignments for each domain:
  == domain 1  score: 451.3 bits;  conditional E-value: 5.5e-139
                   HC-S-HHHHHHHHHHHCTTTCCSS..THHHHHHHHHHHHHHHHHHHTT-SSHHHHHHTTSTT-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
  Peptidase_M3   3 kespdrelRkeayeashskaaeqrntlensklleellklraelAkllgyesyaelaledkmaknpetvldfleelvkklrpllekelkllkelkkke 99 
                    +  ++e+Rk++y++ h+       + ++  l+e+++ ++ +lA+++g++s+ael+l dkma +p  v +fle+l+k++ p++++  +l +++k+ +
    EPX74450.1 275 VSIANPEVRKQIYIQGHKG------SDQDISLFESYVGSKYKLANIVGKSSFAELQLLDKMARSPSCVINFLENLSKENLPKVRQIHSLFSRMKQMD 365
                   56789**************......336699****************************************************************** PP

                   CT-S..SS--CCCHHHHHHHHHCCCCS......--CCCCGGG-BHHHHHHCHHHHHHHHHTEEEEEETTS..--SSTT-EEEEEEET.TT-EEEEEE CS
  Peptidase_M3 100 lgle..gelqpwDvaYYsekqreekyd......ldqeelkeyfpletvleGllelfeeLfGikfveekdakgevwhedVrkleVvdeilsegligei 188
                   lgl+  +e+++wD++YY ++++++ ++       + +  + y++++tv++Gl++lf++L+G++fv+++   ge w ++Vrkl+V++e  ++ lig i
    EPX74450.1 366 LGLTnlPEVNIWDREYYVTRYKQQLFQrksfltSSVNYQRDYLTVGTVIQGLSRLFNSLYGLRFVPAEVMPGEIWDSEVRKLNVLNE--KNCLIGVI 460
                   999999******************999888864344556899*********************************************..******** PP

                   EEEEC--TTS-SS-EEEEEE--BT.......................TS-B--EEEEEEEEE---BTTS--B--HHHHHHHHHHHHHHHHHHC--BS CS
  Peptidase_M3 189 ylDlyerkgKrggAasfglvksre.......................dgtrqlpviylllNftkpsskkPsLLtldevetLfHEfGHsmHsllsrte 262
                   y+Dl+ r+gK++gAa+f++++sre                       + ++q+p i+ll+Nf+k+  ++ s L+l++v+tLfHE+GH+mHs+l+rt+
    EPX74450.1 461 YFDLFTRPGKTDGAAHFTIRSSREldsisindslslgfsdyiseknqQVAYQIPIISLLCNFQKSNDDRSSCLDLWDVKTLFHEMGHAMHSILGRTK 557
                   **********************9445677888999999******998888*********************************************** PP

                   SGGGSTT-S-CCCCCHHHHHHHHGGGSHHHHHCC-B-TTT--B--HHHHHHHHCCCCTTHHHHHHHHHHHHHHHHHCTT-TCCGHH....HHHHHHH CS
  Peptidase_M3 263 ysnvsgtnvpidfvElpSqlmEnlltepevlkslskhyetgeaipeelleklikaknvnaalellrqlvfaafdqelHeeaeeeqilkkdlletyae 359
                   y+n++gt++++dfvElpS++mE+++ + evl ++++hy+t ++ p ++le+  ++++++ al+ ++q++++++dq +H+ a  ++  ++++++++ +
    EPX74450.1 558 YQNLAGTRCATDFVELPSIIMEHFMASSEVLPLYARHYQTDKPFPSQILEHYNQVEDSCVALDQQSQICMSMIDQVFHSGAVSKP--DFNSVDVVHQ 652
                   ***********************************************************************************88..899******* PP

                   HHHCTTSCTTBTTSSGGGC-CCCHTSS-TTTTCHHHHHHHHHHHHHHCCHHCCTT-CCHHHHHHHHTTTTTTSS-HHHHHHCCCSS---SHHHHHHC CS
  Peptidase_M3 360 lrkkflglpvapdeasqasFghlfahgYaanYYsylyaevlaldifekffeedplnretGeryrkeiLsrGgskdplellkkflgrepsadallkal 456
                   + ++f+g++++p+++++++F+hl+  gY+a YYsyl++++la+ +f+k+f+++pl+re+Ge++r++iL++Ggs+ p+e+++++l+++  a++ +ka+
    EPX74450.1 653 ISNRFSGFESVPKTSWHLQFSHLY--GYSASYYSYLFDTALASLVFRKLFSKNPLKREAGEKFRNTILKWGGSRNPWECIAEALEDPVYAEGGEKAM 747
                   ************************..********************************************************************999 PP

                   T CS
  Peptidase_M3 457 g 457
                   +
    EPX74450.1 748 Q 748
                   7 PP

>> Peptidase_M91  Effector protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   1.8e-05      0.16      69     120 ..     502     564 ..     467     574 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.8e-05
  Peptidase_M91  69 gegtdaeinynpafsse....eegkegrPs.......avLyHElaHaydalngtlddgeydgk 120
                     +++++++ y   + s     +++++ r+s        +L+HE+ Ha++++ g ++ ++ +g+
     EPX74450.1 502 ISEKNQQVAYQIPIISLlcnfQKSNDDRSScldlwdvKTLFHEMGHAMHSILGRTKYQNLAGT 564
                    455555555555544445555566777777889998677**************9998877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (762 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       498  (0.0277762); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.27s 00:00:00.91 Elapsed: 00:00:00.45
# Mc/sec: 5077.98
//
Query:       EPX74451.1  [L=519]
Description: CwfJ family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.2e-40  135.3   0.0    1.6e-39  134.5   0.0    1.4  1  CwfJ_C_1  Protein similar to CwfJ C-terminus 1
    6.3e-16   59.1   0.7    1.2e-15   58.1   0.7    1.5  1  CwfJ_C_2  Protein similar to CwfJ C-terminus 2


Domain annotation for each model (and alignments):
>> CwfJ_C_1  Protein similar to CwfJ C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.5   0.0   1.8e-43   1.6e-39       5     121 ..     296     427 ..     293     428 .. 0.96

  Alignments for each domain:
  == domain 1  score: 134.5 bits;  conditional E-value: 1.8e-43
                 HHHHHHHHH-S----SS---SS--S-B-SSEEEE---S-S...........STT-EEEEESS--SSTTSS-H....HHHHHHHHHHHHHHHHHHHTT-- CS
    CwfJ_C_1   5 krikasldsClfClsnpklekhlivsignkvYlalpkgpL...........ssgHvliipieHisallslde....evldeirkfrkalvkmykkqdkd 88 
                 k++k+ +d C+fClsn++   hliv+ign++Y+alpkgpL              Hvliipi+H+sal+ l++    ++ de+++frka+++my++ ++d
  EPX74451.1 296 KKSKVGPDACFFCLSNSSISLHLIVAIGNEAYMALPKGPLttkdtnvpelpFPAHVLIIPIAHTSALSLLSDssyqNTVDELHRFRKAVTQMYNAHNSD 394
                 8999**********************************************999**************9998888999********************** PP

                 EEEEEE-SSS-----EEEEE--HHHHTTHHHHH CS
    CwfJ_C_1  89 avvfEissersvHlaiqvipvpksiskkaelyf 121
                 a+v+Eis+++ vH+++qvip+pk +s ka  yf
  EPX74451.1 395 AIVYEISRANGVHVHWQVIPIPKDLSPKALEYF 427
                 ************************999988887 PP

>> CwfJ_C_2  Protein similar to CwfJ C-terminus 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.1   0.7   1.4e-19   1.2e-15      22      99 .]     445     519 .]     424     519 .] 0.90

  Alignments for each domain:
  == domain 1  score: 58.1 bits;  conditional E-value: 1.4e-19
                 -SSS--EEEEETTT-..-EEE----HHHH-TTHHHHHHHHHTT--TTT.SS------S--H.HHHHHHHHHHTTT--X CS
    CwfJ_C_2  22 vknlpyfyvqfdykgekgyghviedeerfdlqFareviaglLdlekrrkwrkpkrqskeeeekrveaFkkawkkyDwT 99 
                  ++l+yf v + + +  +++h    +erfdlqF+r+  a+l+++e+r++wr+ ++q++eee+k++e+Fk+ +k+yD+T
  EPX74451.1 445 SHELNYFRVFLPSGE--VLVHTLSLRERFDLQFGRRAAAKLMGIEERIDWRQ-CNQTEEEEKKDAEDFKSYFKPYDFT 519
                 468999999997776..888988*****************************.************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (519 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       557  (0.031067); expected 358.6 (0.02)
Passed bias filter:                      514  (0.0286686); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 3727.02
//
Query:       EPX74452.1  [L=407]
Description: RSC complex subunit Rsc58 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (407 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       465  (0.0259356); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.28s 00:00:00.78 Elapsed: 00:00:00.45
# Mc/sec: 2727.12
//
Query:       EPX74453.1  [L=2106]
Description: sporulation protein Spo15 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.7e-12   48.0 333.5     0.0013   19.1  37.4   17.8 17  ATG16           Autophagy protein 16 (ATG16)
    0.00012   21.1  27.0    0.00012   21.1  27.0   11.5 11  CALCOCO1        Calcium binding and coiled-coil domain (CALCO
    0.00014   20.9  52.5    0.00048   19.1  25.9   15.4 19  Spc7            Spc7 kinetochore protein
    0.00055   20.0   7.0    0.00055   20.0   7.0   25.1 25  BRE1            BRE1 E3 ubiquitin ligase
    0.00064   19.5   3.7    0.00064   19.5   3.7   16.6 17  DUF745          Protein of unknown function (DUF745)
     0.0027   17.9  20.1     0.0027   17.9  20.1   19.3 16  UPF0242         Uncharacterised protein family (UPF0242) N-te
     0.0029   17.6   7.0     0.0029   17.6   7.0   20.0 23  Laminin_II      Laminin Domain II
     0.0041   17.1  12.7     0.0041   17.1  12.7   22.0 22  CENP-F_leu_zip  Leucine-rich repeats of kinetochore protein C
     0.0055   16.5   4.7     0.0055   16.5   4.7   19.3 22  Bacillus_HBL    Bacillus haemolytic enterotoxin (HBL)
  ------ inclusion threshold ------
       0.03   14.1   0.3       0.03   14.1   0.3    9.6 10  TRAF_BIRC3_bd   TNF receptor-associated factor BIRC3 binding 
      0.036   14.2   1.0       0.25   11.5   1.0    2.5  1  Mustang         Musculoskeletal, temporally activated-embryon


Domain annotation for each model (and alignments):
>> ATG16  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4  19.8   0.00017      0.28      15     182 ..     124     292 ..     119     293 .. 0.91
   2 !   10.8  10.2   0.00026      0.42      99     163 ..     292     356 ..     289     357 .. 0.94
   3 !    9.8   3.3   0.00053      0.86     109     169 ..     354     414 ..     349     420 .. 0.90
   4 !   13.9  18.2   2.9e-05     0.047      58     162 ..     408     512 ..     398     514 .. 0.88
   5 !   14.6   5.6   1.7e-05     0.028     114     169 ..     506     561 ..     503     575 .. 0.86
   6 !   13.2  26.0   4.8e-05     0.078       5     175 ..     562     732 ..     560     746 .. 0.75
   7 !   10.7   9.6   0.00029      0.47      24     167 ..     758     898 ..     740     907 .. 0.80
   8 ?    2.5  13.4      0.09   1.5e+02      31     157 ..     902    1018 ..     896    1031 .. 0.57
   9 ?    5.5  27.6     0.011        18      38     187 ..    1004    1146 ..     994    1147 .. 0.70
  10 !   19.1  37.4   7.7e-07    0.0013      17     194 ..    1119    1286 ..    1116    1287 .. 0.86
  11 !   10.2  26.3    0.0004      0.66      75     194 ..    1230    1342 ..    1229    1342 .. 0.92
  12 ?    4.9  22.3     0.017        27      74     178 ..    1285    1382 ..    1282    1411 .. 0.78
  13 ?    2.8  17.4     0.073   1.2e+02      24     167 ..    1468    1601 ..    1439    1606 .. 0.74
  14 ?    2.4  19.1       0.1   1.6e+02       3     153 ..    1514    1664 ..    1512    1690 .. 0.75
  15 ?   -2.0  33.4       2.1   3.4e+03      38     189 ..    1689    1843 ..    1665    1849 .. 0.72
  16 ?    3.5   7.4     0.046        75      76     146 ..    1797    1867 ..    1795    1869 .. 0.47
  17 ?    2.0  11.8      0.13   2.1e+02      72     171 ..    1828    1940 ..    1826    1945 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00017
       ATG16  15 kafaeliqaynrLldrtsaleaenaklekaaasaks.sksskksakekeasasqsnskqsakiqsleqklaqlreelaelyksrgelaqrllelneelq 112
                 + +++li+  +    + ++le+en  l+ +  s+++ + ++k+++  ++ ++s++ +  ++k+++le++l++ ++e  el ++    +qrl ++++e +
  EPX74453.1 124 TQNSSLIADLKAVRSKLATLEHENGLLSMQLMSKSNrEGWEKNPSDMDALTSSEDYQYFQKKVSELESALSSKQSEAYELSRQLLNVTQRLDQKEKEYE 222
                 567888888888889999*********999988888877777777777666666788999*************************************** PP

       ATG16 113 kleeklkedeerlaeleaeraaletklkdreeelrekeklvqdlqDElsaLqlqlnqaEeklrklekENk 182
                 +  +  k+++ ++++ + ++++l+ + ++++  l   ++++  l+   ++L+ q++ +E+kl  l++ N+
  EPX74453.1 223 TVIQDVKSMKDKMNHDQVSNSDLRAEQERLQRLLVSSNNTIGSLRQTETTLRSQCKDVEKKLSALNESNS 292
                 *****************************************************************99986 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00026
       ATG16  99 elaqrllelneelqkleeklkedeerlaeleaeraaletklkdreeelrekeklvqdlqDElsaL 163
                  +++ +++ +e+lq+l ++lk++e  +++l+++ ++le   +d++e ++  +kl ++l+  +++L
  EPX74453.1 292 SNKDEIKDYQEKLQALTNQLKKKEHMIEALRKDTQSLENTSADNAELIEKNRKLEKILRSSIASL 356
                 68899*****************************************************9988887 PP

  == domain 3  score: 9.8 bits;  conditional E-value: 0.00053
       ATG16 109 eelqkleeklkedeerlaeleaeraaletklkdreeelrekeklvqdlqDElsaLqlqlnq 169
                 ++l++ +e++++++++++ele + ++l+ kl+ +e+e  e + + + lq  l+  + +l+ 
  EPX74453.1 354 ASLKDSKEEITSMQNKINELEGRSSDLQYKLNTLEDESGEFDSVKHHLQATLEESNYKLSE 414
                 6899*********************************************999999888876 PP

  == domain 4  score: 13.9 bits;  conditional E-value: 2.9e-05
       ATG16  58 akekeasasqsnskqsakiqsleqklaqlreelaelyksrgelaqrllelneelqkleeklkedeerlaeleaeraaletklkdreeelrekeklvqdl 156
                 ++ k++++++s +++++++q+le++++++++ l  +  +r  +++ +++l e++ +l++  ++ +++l++ ++ +a+ e ++++++  l+eke+l+ + 
  EPX74453.1 408 SNYKLSEKTESLNHSNQQLQELEARITETNKHLVLVTSERDRNSSEVKDLHEKITELQNLVTSSSKSLEDSQSIIAQKENEYSKLTSLLEEKERLLFES 506
                 44455555556678899******************************************************************************9998 PP

       ATG16 157 qDElsa 162
                 + E ++
  EPX74453.1 507 KNESVS 512
                 888765 PP

  == domain 5  score: 14.6 bits;  conditional E-value: 1.7e-05
       ATG16 114 leeklkedeerlaeleaeraaletklkdreeelrekeklvqdlqDElsaLqlqlnq 169
                  ++++ ++++ ++ l++++++ e++++d++ el+e+++++ +l DE+ +L    n 
  EPX74453.1 506 SKNESVSKNQYVETLKDQVKKYEDNIEDLTSELNERRNVIAKLGDEYKSLSASRNE 561
                 6889999******************************************9876554 PP

  == domain 6  score: 13.2 bits;  conditional E-value: 4.8e-05
       ATG16   5 qLreRdarqekafaeliqaynr....Lldrtsaleaenaklekaaasakssksskksakekeasasqsnskqsakiqsleqklaqlreelaelyksrge 99 
                 +L e ++  +ka a++ + ++     L d t +l+   + le++ +s+ +   + ++ k ++++ ++s  ++++++ + ++++ +l+++  +l+  ++e
  EPX74453.1 562 ELAEKEQA-QKALADVQDLCKAfqdrLKDSTLSLRNMEKLLEESQNSNGE---EVHTLKAELSRIKSSLDEKDSYVYKVNEQIMSLNKDFNDLQANNEE 656
                 68888887.77777666666662222444444555554445444333333...2233333344444455678899999999999999999999999999 PP

       ATG16 100 laqrllelneelqkleeklkedeerlaeleaeraaletklkdreeelrekeklvqdlqDElsaLqlqlnqaEeklr 175
                  + +  +ln++ ++l++k +  +e  +++e+e+++l++ l++++e+   ++kl +  +D  ++L++   q+Eek +
  EPX74453.1 657 QSRSYDSLNASFAELQKKFNDSQEMNNSMESEIKTLRDSLSKLDETEDSLRKLEEHNRDLSDQLNVYKDQVEEKEN 732
                 9999999999999999999999999999999999999999999999999999999999999999999999999876 PP

  == domain 7  score: 10.7 bits;  conditional E-value: 0.00029
       ATG16  24 ynrLldrtsaleaenaklekaaasaks..sksskksakekeasasqsnskqsakiqsleqklaqlreelaelyksrgelaqrllelneelqkleeklke 120
                 y +    +  l++ n++le++ ++ +s  +  + +++ ++  +    + ++  ++  l+q l++l ee +el    + l+q  ++ +e+   l+ ++++
  EPX74453.1 758 YDDSQSEVTYLKSMNESLEAKHSTFSSsfE--KISTELQSVMK---VKDETFGECCRLKQCLTSLTEEYKELSSDYSGLKQAYQNSEESNNNLRVNSSK 851
                 555555666788888888666555555331..22222222222...3457788999******************************************* PP

       ATG16 121 deerlaeleaeraaletklkdreeelrekeklvqdlqDElsaLqlql 167
                  +e++ +l+++ +++   l++ +  ++ ++ +++ lqDEl+ L+   
  EPX74453.1 852 LTEEIGHLKSSLQNVVSSLSSSKVVMNSLTDANKRLQDELAVLRSNH 898
                 *****************************************998765 PP

  == domain 8  score: 2.5 bits;  conditional E-value: 0.09
       ATG16   31 tsaleaenaklekaaasakssksskksakekeasasqsnskqsakiqsleqklaqlreelaelyksrgelaqrllelneelqkleeklkedeerlae 127 
                  t++l++ ++kl ka+   +s     +sa+e+e++ +++n   + ki +leq+   l +e ++l ++   la+ ++++ e+l+ le   +++ee+ ++
  EPX74453.1  902 TKQLNSDREKLFKASDLYES---LLQSATETEKNLRSENDGYAGKICALEQEKEGLFKEKEDLNQKALSLADEVKDKIEKLSNLEVLHSSREEEFKN 995 
                  57788888888666555555...22333444444444444666666666666666666666666666666666666666666666666666666666 PP

       ATG16  128 leaeraaletklkdreeelrekeklvqdlq 157 
                  +++e ++ ++ l++  e ++       +l 
  EPX74453.1  996 ARDELSEKSKILSQTMEIVK-------QLE 1018
                  66665555555554444444.......333 PP

  == domain 9  score: 5.5 bits;  conditional E-value: 0.011
       ATG16   38 naklekaaasakssksskksakekeasasq..snskqsakiqsleqklaqlreelaelyksrgelaqrllelneelqkleeklkedeerlaeleaer 132 
                  ++ l++ ++ +k+          +e+++++  + ++  ++ ++ e++l +l++ la l++s ++      +l+e+l k ++++++ e+  +++  e+
  EPX74453.1 1004 SKILSQTMEIVKQ---------LEEEKSTTgkEIKHLMSSKENIEEELRTLNSSLASLQRSLEDQIAEKENLSEKLVKSQDSISALEKDQESVLLEK 1091
                  2223222222222.........222222222334445566778888888888888888888888888888888888888888888888888888889 PP

       ATG16  133 aaletklkdreeelrekeklvqdlqDElsaLqlqlnqaEeklrklekENkeLveR 187 
                  ++l++   d+e++l+  e+    l +E+ + + +++++E++  kl++ N++L+e+
  EPX74453.1 1092 NNLQKSKVDLEQALESVERSYASLSEEHRSIRDEYQSLEDAFSKLKELNQKLIEK 1146
                  9999999999999999999999999999999999999999999999999999885 PP

  == domain 10  score: 19.1 bits;  conditional E-value: 7.7e-07
       ATG16   17 faeliqaynrLldrtsaleaenaklekaaasaks.sksskksakekeasasqsnskqsakiqsleqklaqlreelaelyksrgelaqrllelneelq 112 
                  ++++ + y+ L d  s+l++ n+kl +++++++  s   k+ +++++a  +++  +++++++++e+ laq  +e ++++ +++ l+q+l e++++ +
  EPX74453.1 1119 HRSIRDEYQSLEDAFSKLKELNQKLIEKISQSEDlS---KQLKEKNAAV-DDKLLDTTKQLKDTEAMLAQKSQEFSDVQSEKNLLNQQLYEAENSSK 1211
                  6778899******************88877777632...2233333333.3357899**************************************** PP

       ATG16  113 kleeklkedeerlaeleaeraaletklkdreeelrekeklvqdlqDElsaLqlqlnqaEeklrklekENkeLveRWmkrkaq 194 
                  kleek ++++++l ++        ++lkd e+ l++k +   d+q E + L+ ql+ aE  ++kle+ N+ + +++++ ++q
  EPX74453.1 1212 KLEEKNTAMDNKLLDAM-------KQLKDTEAMLAQKSQEFSDVQSEKDLLNQQLSEAENSSKKLEEKNTAMDNKLLDAMKQ 1286
                  ********999987764.......56788899999999999*****************************999999999986 PP

  == domain 11  score: 10.2 bits;  conditional E-value: 0.0004
       ATG16   75 kiqsleqklaqlreelaelyksrgelaqrllelneelqkleeklkedeerlaeleaeraaletklkdreeelrekeklvqdlqDElsaLqlqlnqaE 171 
                  +++++e+ laq  +e ++++ ++  l+q+l e++++ +kleek ++++++l ++        ++lkd e+ l++k +   d+q E + L+ ql+ aE
  EPX74453.1 1230 QLKDTEAMLAQKSQEFSDVQSEKDLLNQQLSEAENSSKKLEEKNTAMDNKLLDAM-------KQLKDTEAMLAQKSQEFSDVQSEKNLLNQQLSEAE 1319
                  678999***************************************9999887764.......56788899999999999****************** PP

       ATG16  172 eklrklekENkeLveRWmkrkaq 194 
                    ++kle+ N+ + +++++ ++q
  EPX74453.1 1320 NSSKKLEEKNTAMDNKLLDAMKQ 1342
                  ***********999999998876 PP

  == domain 12  score: 4.9 bits;  conditional E-value: 0.017
       ATG16   74 akiqsleqklaqlreelaelyksrgelaqrllelneelqkleeklkedeerlaeleaeraaletklkdreeelrekeklvqdlqDElsaLqlqlnqa 170 
                  ++++++e+ laq  +e ++++ +++ l+q+l e++++ +kleek ++++++l ++ ++        kd e  l++k +    +q E + L+ q++ a
  EPX74453.1 1285 KQLKDTEAMLAQKSQEFSDVQSEKNLLNQQLSEAENSSKKLEEKNTAMDNKLLDAMKQL-------KDTETMLAQKSQEFSYVQSEKDLLNQQFSEA 1374
                  6889999***************************************9999988776554.......4555556666666677788888888888888 PP

       ATG16  171 Eeklrkle 178 
                  Ee+   l+
  EPX74453.1 1375 EENISSLH 1382
                  87766443 PP

  == domain 13  score: 2.8 bits;  conditional E-value: 0.073
       ATG16   24 ynrLldrtsaleaenaklekaaasakssksskksakekeasasq....snskqsakiqsleqklaqlreelaelyksrgelaqrllelneelqklee 116 
                   ++L dr++  ++ + +l++  ++ +s               sq    ++++ +++ ++l ++l  l+ e+    ks + +++ l++++e +  l++
  EPX74453.1 1468 ETELQDRIQDADTLSNELRNVRSDLNS--------------LSQlfsdTKKDYASREHDLITQLNDLNLEVDSFSKSIESNSSELQRKEELIGGLNQ 1550
                  223444444444444444322222222..............222333344555566678999999999***************************** PP

       ATG16  117 klkedeerlaeleaeraaletklkdreeelrekeklvqdlqDElsaLqlql 167 
                  k+++ ++ l++ ++e ++ +  l++++  ++ +++ ++++  E ++   +l
  EPX74453.1 1551 KINNLQRDLESSSEEANTHKSDLENKRSLVNKLTERIEIVTKEKQSVSEEL 1601
                  ******************************************999987776 PP

  == domain 14  score: 2.4 bits;  conditional E-value: 0.1
       ATG16    3 laqLreRdarqekafaeliqaynr.Lldrtsaleaenaklekaaasakssksskksakekeasasqsnskqsakiqsleqklaqlreelaelyksrg 98  
                  ++qL++ + +  ++f++ i+  +  L  + ++    n+k+++   + +ss+ ++++ k++++++++  +k +++i+  +++ +++ eel+    s +
  EPX74453.1 1514 ITQLNDLNLE-VDSFSKSIESNSSeLQRKEELIGGLNQKINNLQRDLESSSEEANTHKSDLENKRSLVNKLTERIEIVTKEKQSVSEELTGIKMSYE 1609
                  5666666664.555555555544315555556566666665555555555566667777788888888899999999999999999*********** PP

       ATG16   99 elaqrllelneelqkleeklkedeerlaeleaeraaletklkdreeelrekeklv 153 
                  + +++l ++++el+  +++l+++e + ++l+++  +l++k +++   +++ e  +
  EPX74453.1 1610 KANNKLSATEAELHFVQDNLSKKEDESKKLSSNLHTLKKKTDEHMVLIKGYEVDL 1664
                  *************************************999999888888766555 PP

  == domain 15  score: -2.0 bits;  conditional E-value: 2.1
       ATG16   38 naklekaaasakssksskksakekeasasqsnskqsakiqsleqk...laqlreelaelyksrgelaqrllelneelqkleeklkedeerlaeleae 131 
                  ++kl             ++s+ke++a  +q +s++++ +++leqk   +++ +e  + l+k ++ ++++l +l+eel++l+++++e  ++l+++e +
  EPX74453.1 1689 KEKL-------------EASSKETNAAIQQLDSEKRKILKDLEQKrllITEKNEIIESLQKFKNNSEDKLAKLEEELHTLKNSSEEYVQKLQDAECK 1772
                  2222.............1122222222222233333444445544111556666678999************************************* PP

       ATG16  132 raaletklkdreeelrekeklvq..........dlqDElsaLqlqlnqaEeklrklekENkeL...veRWm 189 
                   ++l+  l++ +eel  k++  +           +q El a   +l+++E+ l  +++ N+eL   v+R m
  EPX74453.1 1773 ANNLQNLLNRSNEELSVKDQQCKelqstqqsltVVQNELKAKCSTLSSLEDVLTGTQAHNTELegeVKRSM 1843
                  ******99999999999999999888888888889999999999999999999999999999855555555 PP

  == domain 16  score: 3.5 bits;  conditional E-value: 0.046
       ATG16   76 iqsleqklaqlreelaelyksrgelaqrllelneelqkleeklkedeerlaeleaeraaletklkdreeel 146 
                  +qs++q l+ +++el++   + + l++ l+ +++   +le + k+  er+++  +++ +l  k+k++ ++l
  EPX74453.1 1797 LQSTQQSLTVVQNELKAKCSTLSSLEDVLTGTQAHNTELEGEVKRSMERIKRRDDRCDHLASKVKKLHQQL 1867
                  44455555555555555555555555555555555555555555555555555555555555555554444 PP

  == domain 17  score: 2.0 bits;  conditional E-value: 0.13
       ATG16   72 qsakiqsleqklaqlreelaelyksrgelaqrllelneelqklee.klkedeerlaeleaeraaletklkdreeelrekeklvq............d 155 
                  ++a+ ++le ++++  e  +    ++ +la+++++l ++l+++ +   +++++r+ +l++ + +++++ k +++ ++ +++lv             d
  EPX74453.1 1828 TQAHNTELEGEVKRSMERIKRRDDRCDHLASKVKKLHQQLSQQHDtFFEAEQKRILQLTNLKDTVKKQDKHLKKLIQKQDELVPrstilvyeayikD 1924
                  5677888889999999999999999***************88876257999*******************************999999999999999 PP

       ATG16  156 lqDElsaLqlqlnqaE 171 
                  +  E++ Lq +ln++E
  EPX74453.1 1925 IEKEIIILQERLNSLE 1940
                  9999999999998888 PP

>> CALCOCO1  Calcium binding and coiled-coil domain (CALCOCO1) like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.6  10.5    0.0074        12     161     259 ..     153     248 ..     119     252 .. 0.84
   2 ?   -1.6  32.0      0.57   9.3e+02      75     260 ..     242     433 ..     237     440 .. 0.82
   3 !    6.5  27.0    0.0019       3.1      38     196 ..     417     585 ..     412     599 .. 0.78
   4 !    6.3  11.0    0.0023       3.8     173     262 ..     601     691 ..     584     703 .. 0.68
   5 ?    2.2  18.1     0.039        64      75     269 ..     706     900 ..     697     917 .. 0.51
   6 ?   -3.9  31.5       2.9   4.7e+03      63     254 ..     897    1085 ..     888    1090 .. 0.67
   7 ?   -3.1  42.4       1.6   2.6e+03      59     272 ..    1082    1292 ..    1071    1296 .. 0.46
   8 ?   -4.2  47.8       3.6   5.8e+03      47     269 ..    1175    1401 ..    1170    1476 .. 0.84
   9 !   21.1  27.0   7.4e-08   0.00012      29     254 ..    1478    1700 ..    1470    1706 .. 0.91
  10 ?    1.6  35.2     0.061        99      77     268 ..    1670    1871 ..    1657    1884 .. 0.69
  11 ?   -1.9  10.7      0.68   1.1e+03      45     121 ..    1823    1910 ..    1806    1947 .. 0.51

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.0074
    CALCOCO1 161 kalaqrkeeeaerkqlqakleqseeelrslskelqelrnslaerdtqvlqLqdtittltqkLttAqrkeaenEallkelrslqerlaaSerkvegLkee 259
                 +++ +   e  e++ ++++  +s e+ + + k + el + l  +++++ +L  ++ ++tq+L+   +ke e E++ ++++s++++++  + +   L++e
  EPX74453.1 153 QLMSKSNREGWEKNPSDMDALTSSEDYQYFQKKVSELESALSSKQSEAYELSRQLLNVTQRLD---QKEKEYETVIQDVKSMKDKMNHDQVSNSDLRAE 248
                 5555666677788889999999999*************************************7...7999******************99999999887 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.57
    CALCOCO1  75 rkelesrveelkeelkesrekveeleekqkelerlseelaeeksalleakeesearirELEeDiktltqralekEteLeRlkerak...kalaqrkeee 170
                  ++l+ + e+l++ l +s++ + +l++ +  l++  + + ++ sal e ++ ++  i++  e  ++lt++  +kE  +e l++  +    + a   e  
  EPX74453.1 242 NSDLRAEQERLQRLLVSSNNTIGSLRQTETTLRSQCKDVEKKLSALNE-SNSNKDEIKDYQEKLQALTNQLKKKEHMIEALRKDTQsleNTSADNAELI 339
                 5799999******************99888888888888877777765.5567789*************************987773445555556666 PP

    CALCOCO1 171 aerkqlqakleqseeelrslskelqelrnslaerdtqvlqLqdtittltqkLtt....AqrkeaenEallkelrslqerlaaSerkvegLkeeL 260
                 + +++l++ l++s + l+   +e+ +++n+ +e + +   Lq +++tl+++  +     ++ +a  E++  +l+   e l+ S+++ + L++ +
  EPX74453.1 340 EKNRKLEKILRSSIASLKDSKEEITSMQNKINELEGRSSDLQYKLNTLEDESGEfdsvKHHLQATLEESNYKLSEKTESLNHSNQQLQELEARI 433
                 778889989999999999999999999999999999999999999999987544111135557889999999************9999988765 PP

  == domain 3  score: 6.5 bits;  conditional E-value: 0.0019
    CALCOCO1  38 eclreraeLlqaqeaanrqrekekeeykrdreeldrerkelesrveelkeelkesre....kveeleekqkelerlseelaeeksalleakeesear.. 130
                 e+l   ++ lq+ ea   + +k      ++r++  +e+k+l++++ el++ +++s +     +  +++k++e ++l+  l e+++ l e k+es+++  
  EPX74453.1 417 ESLNHSNQQLQELEARITETNKHLVLVTSERDRNSSEVKDLHEKITELQNLVTSSSKsledSQSIIAQKENEYSKLTSLLEEKERLLFESKNESVSKnq 515
                 788888999999999999999999999**********************98877665333244456677888888888888888888888888754322 PP

    CALCOCO1 131 ........irELEeDiktltqralekEteLeRlkerakkalaqrkeeeaerkqlqakleqseeelrslskelqe 196
                         ++  E++i+ lt    e+   + +l ++ k + a r ee ae++q q+ l   +     l+k +q+
  EPX74453.1 516 yvetlkdqVKKYEDNIEDLTSELNERRNVIAKLGDEYKSLSASRNEELAEKEQAQKALADVQ----DLCKAFQD 585
                 2222222388999******************************************7776555....55555553 PP

  == domain 4  score: 6.3 bits;  conditional E-value: 0.0023
    CALCOCO1 173 rkqlqakleqseeelrslskelqelrnslaerdtqvlqLqdtittltqkLttAqrkeaen....EallkelrslqerlaaSerkvegLkeeLss 262
                  +++q   ++  ee++ l +el ++++sl+e+d+ v +++++i  l++  ++ q  + e+    ++l + +  lq +++ S+   + +++e++ 
  EPX74453.1 601 LEESQ---NSNGEEVHTLKAELSRIKSSLDEKDSYVYKVNEQIMSLNKDFNDLQANNEEQsrsyDSLNASFAELQKKFNDSQEMNNSMESEIKT 691
                 33333...55568899999999999999999999999999999999988887665555541111445555666788888888888888887665 PP

  == domain 5  score: 2.2 bits;  conditional E-value: 0.039
    CALCOCO1  75 rkelesrveelkeelkesrekveelee...kqkelerlseelaeeksalleakeesearirELEeDiktltqralekEteLeRlkerakkalaqrkeee 170
                  ++le++  +l ++l+ ++++vee e+      +l++l+++l  + +   +  ++s++ +  L    ++l  +  +    +e++  + + +++ + e  
  EPX74453.1 706 LRKLEEHNRDLSDQLNVYKDQVEEKENfiiSLGDLRKLKDNLESKLDSCQRSYDDSQSEVTYLKSMNESLEAKHSTFSSSFEKISTELQSVMKVKDETF 804
                 445555555555555555554444443111334455555555555555555566666666666666666666666666666666666666666655666 PP

    CALCOCO1 171 aerkqlqakleqseeelrslskelqelrnslaerdtqvlqLqdtittltqkLttAqrkeaenEallkelrslqerlaaSerkvegLkeeLssvaaqrdr 269
                  e   l++ l +  ee ++ls+++  l++  ++ + +  +L+ + ++lt+++ + +       ++   l+s++ ++++   + + L++eL+ + + ++ 
  EPX74453.1 805 GECCRLKQCLTSLTEEYKELSSDYSGLKQAYQNSEESNNNLRVNSSKLTEEIGHLK---SSLQNVVSSLSSSKVVMNSLTDANKRLQDELAVLRSNHEG 900
                 66666666666666666666666666666666555555566555555555554332...2333444455555555555555555555555554444433 PP

  == domain 6  score: -3.9 bits;  conditional E-value: 2.9
    CALCOCO1   63 eykrdreeldrerkelesrveelkeelkesrekveeleekqkelerlseelaeeksalleakeesearirELEeDiktltqralekEteLeRlkera 159 
                  +++   ++l++ r++l +  +  ++ l++++e  ++l++++ + +    +l +ek+ l ++ke+ +++   L +++k   ++  + E+      e+ 
  EPX74453.1  897 NHEGVTKQLNSDREKLFKASDLYESLLQSATETEKNLRSENDGYAGKICALEQEKEGLFKEKEDLNQKALSLADEVKDKIEKLSNLEVLHSSREEEF 993 
                  4555566777777777755555556666777777777777777778888888888888888888888888888888765555544444333333444 PP

    CALCOCO1  160 kkalaqrkeeeaerkqlqakleqseeelrslskelqelrnslaerdtqvlqLqdtittltqkLttAqrkeaenEallkelrslqerlaaSerkve 254 
                  k a   + e+ +  +q    ++q eee     ke+++l +s+++ + ++ +L+++++ l++ L++   ++ae+E+l ++l  +q+ + a e+  e
  EPX74453.1  994 KNARDELSEKSKILSQTMEIVKQLEEEKSTTGKEIKHLMSSKENIEEELRTLNSSLASLQRSLED---QIAEKENLSEKLVKSQDSISALEKDQE 1085
                  44444444444444444445667788888888888888888888888888888888888888864...688888888888888888877776655 PP

  == domain 7  score: -3.1 bits;  conditional E-value: 1.6
    CALCOCO1   59 kekeeykrdreeldrerkelesrveelkeelkesrekveeleekqkelerlseelaeeksalleakeesearirELEeDiktltqralekEteLeRl 155 
                  k++e    ++++l++ + +le+ +e +++  +++ e++++++ +++ le++  +l+e ++ l+e+  +se   + L e  +++ ++ l+   +L   
  EPX74453.1 1082 KDQESVLLEKNNLQKSKVDLEQALESVERSYASLSEEHRSIRDEYQSLEDAFSKLKELNQKLIEKISQSEDLSKQLKEKNAAVDDKLLDTTKQL--- 1175
                  5555555555555555555555555555555555555555555555555555555555555555555555555555555555555555544333... PP

    CALCOCO1  156 kerakkalaqrkeeeaerkqlqakleqseeelrslskelqelrnslaerdtq.vlqLqdtittltqkLttAqrkeaenEallkelrslqerlaaSer 251 
                  k++ + +laq+ +e ++ ++ ++ l+q   e ++ sk l+e    ++++  + + qL+dt + l qk ++    + e++ l ++l+ + +  +  e 
  EPX74453.1 1176 KDT-EAMLAQKSQEFSDVQSEKNLLNQQLYEAENSSKKLEEKNTAMDNKLLDaMKQLKDTEAMLAQKSQEFSDVQSEKDLLNQQLSEAENSSKKLEE 1271
                  332.233444444444444444444444444444444444444444444332033455555555555555555555555555555555555555555 PP

    CALCOCO1  252 kvegLkeeLssvaaqrdrtqa 272 
                  k +++ + L ++  q   t+a
  EPX74453.1 1272 KNTAMDNKLLDAMKQLKDTEA 1292
                  544444444443333333333 PP

  == domain 8  score: -4.2 bits;  conditional E-value: 3.6
    CALCOCO1   47 lqaqeaanrqrekekeeykrdreeldrerkelesrveelkeelkesrekveeleekqkelerlseelaeeksalleakeesearirELEeDiktltq 143 
                  l+ +ea   q+ +e ++ +++++ l+++  e e++ ++l+e+ + +++k  + +++ k++e++ ++ ++e+s   ++k+  ++++ E E+ +k l +
  EPX74453.1 1175 LKDTEAMLAQKSQEFSDVQSEKNLLNQQLYEAENSSKKLEEKNTAMDNKLLDAMKQLKDTEAMLAQKSQEFSDVQSEKDLLNQQLSEAENSSKKLEE 1271
                  778899999***************************************************************999999999**************** PP

    CALCOCO1  144 ralekEte.LeRlkerak..kalaqrkeeeaerkqlqakleqseeelrslskelqelrnslaerdtqv.lqLqdtittltqkLttAqrkeaenEall 236 
                  +    + + L+ +k+      +laq+ +e ++ ++ ++ l+q  +e ++ sk l+e    ++++  ++  qL+dt t l qk ++    + e++ l 
  EPX74453.1 1272 KNTAMDNKlLDAMKQLKDteAMLAQKSQEFSDVQSEKNLLNQQLSEAENSSKKLEEKNTAMDNKLLDAmKQLKDTETMLAQKSQEFSYVQSEKDLLN 1368
                  *9988876357888754444899***********99999*****************999999998765179************************** PP

    CALCOCO1  237 kelrslqerlaaSerkvegLkeeLssvaaqrdr 269 
                  ++++ + e + +  ++ +  +++ ++++a+ d+
  EPX74453.1 1369 QQFSEAEENISSLHQSIAQFENDKKELSAKIDS 1401
                  ********9999888888888877777776664 PP

  == domain 9  score: 21.1 bits;  conditional E-value: 7.4e-08
    CALCOCO1   29 AelLqnrLeeclreraeLlqaqeaanrqrekekeeykrdreeldrerkelesrveelkeelkesrekveeleekqkelerlseelaeeksalleake 125 
                  A+ L n L + + + + L q +  ++++     ++  ++ ++l+ e+  +++++e   +el++ +e +  l++k ++l+r  e+ +ee ++  +  e
  EPX74453.1 1478 ADTLSNELRNVRSDLNSLSQLFSDTKKDYASREHDLITQLNDLNLEVDSFSKSIESNSSELQRKEELIGGLNQKINNLQRDLESSSEEANTHKSDLE 1574
                  78899******************99999999999999************************************************************ PP

    CALCOCO1  126 esearirELEeDiktltqralekEteLeRlkerakkalaqrkeeeaerkqlqakleqseeelrslskelqelrnslaerdtqvlqLqdtittltqkL 222 
                  ++++ +  L e i+++t+ ++    eL  +k   +ka +++   eae + +q +l++ e+e+++ls++l++l+ + +e+      ++     l++  
  EPX74453.1 1575 NKRSLVNKLTERIEIVTKEKQSVSEELTGIKMSYEKANNKLSATEAELHFVQDNLSKKEDESKKLSSNLHTLKKKTDEHMVL---IKGYEVDLQNSA 1668
                  *************************************************************************998887544...444445677777 PP

    CALCOCO1  223 ttAqrkeaenEallkelrslqerlaaSerkve 254 
                  +t +++ a   +l k ++  +e+l+aS ++++
  EPX74453.1 1669 NTINHHLATIGSLEKVISENKEKLEASSKETN 1700
                  77777778888888888888888888877765 PP

  == domain 10  score: 1.6 bits;  conditional E-value: 0.061
    CALCOCO1   77 elesrveelkeelkesrekveeleekqkelerlseelaeeksalleakeesearirELEeDiktltqralekEteLeRlkerak.......kalaqr 166 
                   ++++++ + +  k   e++e+le+  ke++++ ++l  ek+ +l+  e+++  i E +e i++l + + + E +L +l e+ +         ++++
  EPX74453.1 1670 TINHHLATIGSLEKVISENKEKLEASSKETNAAIQQLDSEKRKILKDLEQKRLLITEKNEIIESLQKFKNNSEDKLAKLEEELHtlknsseEYVQKL 1766
                  55556666666666778899999***********************************99999998655555555544444444444444399999* PP

    CALCOCO1  167 keeeaerkqlqakleqseeelr...slskelqelrnslaerdtqvlqLqdtittltqkLttAqrkeaenEa.llkelrslqerlaaSerkvegLkee 259 
                  ++ e   ++lq+ l+ s+eel    + +kelq+ ++sl   + ++    +t++ l++ Lt  q +++e E  +++ +  ++ r    ++ +   k+ 
  EPX74453.1 1767 QDAECKANNLQNLLNRSNEELSvkdQQCKELQSTQQSLTVVQNELKAKCSTLSSLEDVLTGTQAHNTELEGeVKRSMERIKRRDDRCDHLASKVKK- 1862
                  ********************9622256777777777777777777777788888899998877777777741333444444444444443333332. PP

    CALCOCO1  260 Lssvaaqrd 268 
                  L++  +q+ 
  EPX74453.1 1863 LHQQLSQQH 1871
                  333334444 PP

  == domain 11  score: -1.9 bits;  conditional E-value: 0.68
    CALCOCO1   45 eLlqaqeaanrqrekekeeykrdreeldrerkelesrveelkeelkesre...........kveeleekqkelerlseelaeeksall 121 
                  + l  ++a n + e e ++  +  ++ d++   l s+v++l+++l+++++           + ++l+   k++++  ++l ++++ l+
  EPX74453.1 1823 DVLTGTQAHNTELEGEVKRSMERIKRRDDRCDHLASKVKKLHQQLSQQHDtffeaeqkrilQLTNLKDTVKKQDKHLKKLIQKQDELV 1910
                  3444444555555555444444444445555556666666666666655544444444444444444444444444444444444444 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8  12.6     0.056        91     189     295 ..     166     272 ..     121     275 .. 0.74
   2 !    7.2  14.6    0.0012         2     150     243 ..     244     339 ..     243     341 .. 0.81
   3 !   19.1  25.9   2.9e-07   0.00048     146     293 ..     326     479 ..     316     489 .. 0.90
   4 !    5.9  22.8    0.0031         5     145     281 ..     479     625 ..     468     629 .. 0.74
   5 !   17.9  18.6   6.8e-07    0.0011     144     286 ..     636     783 ..     633     801 .. 0.90
   6 !    9.1  11.4   0.00033      0.54     140     262 ..     813     938 ..     808     954 .. 0.84
   7 ?    1.6  26.4     0.063     1e+02     155     274 ..     937    1066 ..     917    1075 .. 0.61
   8 ?    0.8  31.2      0.11   1.8e+02     142     259 ..    1092    1212 ..    1063    1219 .. 0.67
   9 ?   -0.5  24.2      0.27   4.3e+02     141     249 ..    1165    1272 ..    1162    1285 .. 0.81
  10 ?   -3.2  31.0       1.9   3.1e+03     141     266 ..    1221    1346 ..    1210    1348 .. 0.75
  11 ?    4.1  24.2     0.011        18     141     259 ..    1277    1394 ..    1274    1413 .. 0.84
  12 ?    4.2  15.7     0.011        17     146     248 ..    1313    1411 ..    1311    1454 .. 0.60
  13 !    4.8   6.7    0.0066        11     165     255 ..    1457    1543 ..    1425    1546 .. 0.68
  14 !    7.0  12.9    0.0014       2.3     162     252 ..    1514    1603 ..    1495    1613 .. 0.80
  15 ?    3.0  20.5     0.024        39     135     234 ..    1550    1655 ..    1538    1689 .. 0.47
  16 !    4.8  18.0    0.0066        11     150     254 ..    1663    1770 ..    1653    1772 .. 0.82
  17 ?    2.9  23.8     0.026        42     137     247 ..    1703    1819 ..    1700    1826 .. 0.86
  18 ?    0.6  17.4      0.13   2.1e+02     162     262 ..    1773    1872 ..    1770    1899 .. 0.83
  19 ?    0.5  10.7      0.13   2.2e+02     137     252 ..    1821    1938 ..    1818    1949 .. 0.52

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.056
        Spc7 189 aaeelesid.keeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeaervleeckgwsesevsrlkeevkaleeltgwki 286
                    ++++++ +e+ + ++++++el++ +++k+ e  el +ql ++++++++ +++++++ ++++ + + ++++ ++s+s++++ +e++++l   ++ +i
  EPX74453.1 166 NPSDMDALTsSEDYQYFQKKVSELESALSSKQSEAYELSRQLLNVTQRLDQKEKEYETVIQDVK-SMKDKMNHDQVSNSDLRAEQERLQRLLVSSNNTI 263
                 4556666665788888999******************************999999999999988.666777899999*************999999999 PP

        Spc7 287 vslsgstle 295
                  sl++++ +
  EPX74453.1 264 GSLRQTETT 272
                 988877665 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0012
        Spc7 150 gleedkelLekqeeeldellpeleeekaeleeeleklqeaaeeles..idkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqk 243
                 +l++++e+L++     ++   +l++ +++l+++ ++ +++   l++  ++k+e++ ++e+l++l +++++k+ +++ l+++ ++le++ ++ +e +
  EPX74453.1 244 DLRAEQERLQRLLVSSNNTIGSLRQTETTLRSQCKDVEKKLSALNEsnSNKDEIKDYQEKLQALTNQLKKKEHMIEALRKDTQSLENTSADNAELI 339
                 56777788888888888888888888888888888888855554443378************************************9999887765 PP

  == domain 3  score: 19.1 bits;  conditional E-value: 2.9e-07
        Spc7 146 enlegleedkelLekqeeeldellpeleeekaeleeeleklqeaaeeles..id.keeLeelreelaelkaeieekkkelaelqeqleeleekieelke 241
                 + le+  +d+++L +++ +l+++l +  +  ++ +ee++++q++ +ele   +d + +L++l +e  e ++  +++++ l+e + +l e++e++++ ++
  EPX74453.1 326 QSLENTSADNAELIEKNRKLEKILRSSIASLKDSKEEITSMQNKINELEGrsSDlQYKLNTLEDESGEFDSVKHHLQATLEESNYKLSEKTESLNHSNQ 424
                 56889999**************************************99976689999****************************************** PP

        Spc7 242 qkseleeeiaeaer...vleeckgwsesevsrlkeevkaleeltgwkivslsgst 293
                 q +ele++i e ++   ++  +++ ++sev+ l+e+  +l++l   +  sl++s+
  EPX74453.1 425 QLQELEARITETNKhlvLVTSERDRNSSEVKDLHEKITELQNLVTSSSKSLEDSQ 479
                 ***********99944447899********************9998888888664 PP

  == domain 4  score: 5.9 bits;  conditional E-value: 0.0031
        Spc7 145 eenlegleedkelLekqeeeldellpeleeekaeleeeleklqeaaeeles..id.keeLeelreelaelkaeieekkkelaelqeqleeleekieelk 240
                 ++++++ e+++++L++  ee ++ll e ++e  + ++ +e+l++++++ e+   d   eL+e r+ +a+l  e++++++  +e  +++e+ ++++++++
  EPX74453.1 479 QSIIAQKENEYSKLTSLLEEKERLLFESKNESVSKNQYVETLKDQVKKYEDniEDlTSELNERRNVIAKLGDEYKSLSASRNEELAEKEQAQKALADVQ 577
                 556666677777777777777777777777777777777777776666666544457899999999999999999999888888888888888888888 PP

        Spc7 241 eqkseleeeia.......eaervleeckgwsesevsrlkeevkaleel 281
                 + ++ ++++++       + e++lee ++++ +ev +lk+e++++++ 
  EPX74453.1 578 DLCKAFQDRLKdstlslrNMEKLLEESQNSNGEEVHTLKAELSRIKSS 625
                 88888887665111111167999999*************999999875 PP

  == domain 5  score: 17.9 bits;  conditional E-value: 6.8e-07
        Spc7 144 leenlegleedkelLekqeeeldellpeleeekaeleeeleklqeaaeeles.....id.keeLeelreelaelkaeieekkkelaelqeqleeleeki 236
                 ++e++++l++d + L++++ee ++ +++l++ +ael++++++ qe+++++es      d   +L e+ ++l++l++  + ++++l+  ++q+ee+e+ i
  EPX74453.1 636 VNEQIMSLNKDFNDLQANNEEQSRSYDSLNASFAELQKKFNDSQEMNNSMESeiktlRDsLSKLDETEDSLRKLEEHNRDLSDQLNVYKDQVEEKENFI 734
                 78999****************************************9999999888884448999999*******************************9 PP

        Spc7 237 eelkeqkseleeeiaeaervleeckgwsesevsrlkeevkaleeltgwki 286
                  +l    ++l+++++++ + +++  + s+sev  lk+  ++le ++    
  EPX74453.1 735 ISL-GDLRKLKDNLESKLDSCQRSYDDSQSEVTYLKSMNESLEAKHSTFS 783
                 999.556789999999999************************9997654 PP

  == domain 6  score: 9.1 bits;  conditional E-value: 0.00033
        Spc7 140 LkegleenlegleedkelLekqeeeldellpeleeekaeleeeleklqeaaeeles...idkeeLeelreelaelkaeieekkkelaelqeqleeleek 235
                   ++l+e++++l +d++ L++  ++ +e  ++l+ + ++l+ee+ +l++  +++ s   + k  +++l ++ ++l+ e++ ++ +++ +++ql++ +ek
  EPX74453.1 813 CLTSLTEEYKELSSDYSGLKQAYQNSEESNNNLRVNSSKLTEEIGHLKSSLQNVVSslsSSKVVMNSLTDANKRLQDELAVLRSNHEGVTKQLNSDREK 911
                 567899******************************************966665554546688999********************************* PP

        Spc7 236 ieelkeqkseleeeiaeaervleeckg 262
                 + ++++ +++l +   e e+ l+ + +
  EPX74453.1 912 LFKASDLYESLLQSATETEKNLRSEND 938
                 ****99999988877777776655544 PP

  == domain 7  score: 1.6 bits;  conditional E-value: 0.063
        Spc7  155 kelLekqeeeldellpeleeekaeleeeleklqe..........aaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelke 241 
                  ++  + +   l++ ++ l +ek++l++++ +l +            e l s+ +ee +++r+el+e ++ +++ ++ +++l+e++ +  ++i++l +
  EPX74453.1  937 NDGYAGKICALEQEKEGLFKEKEDLNQKALSLADevkdkieklsNLEVLHSSREEEFKNARDELSEKSKILSQTMEIVKQLEEEKSTTGKEIKHLMS 1033
                  4444444444444444444444444444444433211111111112225557888888888888888888888888888888888888888888888 PP

        Spc7  242 qkseleeeiaeaervleeckgwsesevsrlkee 274 
                  +k+++eee++  ++ l   +++ e+++ + ++ 
  EPX74453.1 1034 SKENIEEELRTLNSSLASLQRSLEDQIAEKENL 1066
                  888888888888888888888877777765555 PP

  == domain 8  score: 0.8 bits;  conditional E-value: 0.11
        Spc7  142 egleenlegleedkelLekqeeeldellpeleeekaeleeeleklqe.aaeeles.idkeeL.eelreelaelkaeieekkkelaelqeqleeleek 235 
                  ++l++   +le+  e +e++ + l+e   +++ e+++le+ + kl+e  ++ +e+ +++e+L ++l+e+ a+++ ++    k+l++ ++ l++++++
  EPX74453.1 1092 NNLQKSKVDLEQALESVERSYASLSEEHRSIRDEYQSLEDAFSKLKElNQKLIEKiSQSEDLsKQLKEKNAAVDDKLLDTTKQLKDTEAMLAQKSQE 1188
                  4455555555555555555555555555555555555555555555532333344344666734688888888888888888888888888889999 PP

        Spc7  236 ieelkeqkseleeeiaeaervlee 259 
                  +++++++k+ l++++ eae+  ++
  EPX74453.1 1189 FSDVQSEKNLLNQQLYEAENSSKK 1212
                  999988888888888888876554 PP

  == domain 9  score: -0.5 bits;  conditional E-value: 0.27
        Spc7  141 kegleenlegleedkelLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekie 237 
                   ++l ++ ++l++ +++L+++ +e++++  e +   ++l e  ++ ++ +e+ +++d++ L +++ +l++ +a +++k++e +++q++++ l+++++
  EPX74453.1 1165 DDKLLDTTKQLKDTEAMLAQKSQEFSDVQSEKNLLNQQLYEAENSSKKLEEKNTAMDNKLLDAMK-QLKDTEAMLAQKSQEFSDVQSEKDLLNQQLS 1260
                  56788889999999999999999999888887777777777777777766666667777666665.79***************************** PP

        Spc7  238 elkeqkseleee 249 
                  e++++ ++lee+
  EPX74453.1 1261 EAENSSKKLEEK 1272
                  ***999999875 PP

  == domain 10  score: -3.2 bits;  conditional E-value: 1.9
        Spc7  141 kegleenlegleedkelLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekie 237 
                   ++l + +++l++ +++L+++ +e++++  e +   ++l+e  ++ ++ +e+ +++d++ L +++ +l++ +a +++k++e +++q++++ l+++++
  EPX74453.1 1221 DNKLLDAMKQLKDTEAMLAQKSQEFSDVQSEKDLLNQQLSEAENSSKKLEEKNTAMDNKLLDAMK-QLKDTEAMLAQKSQEFSDVQSEKNLLNQQLS 1316
                  56777888888888888888888888888777777777777777777766666667776666665.7999999999999999999999999999999 PP

        Spc7  238 elkeqkselee.eiaeaervleeckgwses 266 
                  e++++ ++lee ++a  +++l++ k+ +++
  EPX74453.1 1317 EAENSSKKLEEkNTAMDNKLLDAMKQLKDT 1346
                  999988888751566667777777766655 PP

  == domain 11  score: 4.1 bits;  conditional E-value: 0.011
        Spc7  141 kegleenlegleedkelLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekie 237 
                   ++l + +++l++ +++L+++ +e++++  e +   ++l+e  ++ ++ +e+ +++d++ L +++ +l++ ++ +++k++e + +q++++ l+++++
  EPX74453.1 1277 DNKLLDAMKQLKDTEAMLAQKSQEFSDVQSEKNLLNQQLSEAENSSKKLEEKNTAMDNKLLDAMK-QLKDTETMLAQKSQEFSYVQSEKDLLNQQFS 1372
                  57888899999999999999999999998888888888887777777777776777777776665.79***************************** PP

        Spc7  238 elkeqkseleeeiaeaervlee 259 
                  e++e++s+l++ ia+ e+ ++e
  EPX74453.1 1373 EAEENISSLHQSIAQFENDKKE 1394
                  **************98887765 PP

  == domain 12  score: 4.2 bits;  conditional E-value: 0.011
        Spc7  146 enlegleedkelLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeq 242 
                  ++l++ e+ +++Le+++    ++ ++l    ++l+++ ++l ++++e++ +++e+   l ++++e++++i+++ + +a+ +++++el++ki+++ ++
  EPX74453.1 1313 QQLSEAENSSKKLEEKNT---AMDNKLLDAMKQLKDTETMLAQKSQEFSYVQSEK-DLLNQQFSEAEENISSLHQSIAQFENDKKELSAKIDSIGKE 1405
                  444555555555554444...4455666666677777777777777766655333.44556777777777777777777777777777777777777 PP

        Spc7  243 kselee 248 
                   +el++
  EPX74453.1 1406 NEELNS 1411
                  666665 PP

  == domain 13  score: 4.8 bits;  conditional E-value: 0.0066
        Spc7  165 ldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeaer 255 
                  ++el ++l+++++el++++++  + ++el ++   +L++l + +++ k+++++++    +l +ql++l+ ++++ ++++++  +e++++e+
  EPX74453.1 1457 FKELTNKLRNKETELQDRIQDADTLSNELRNVR-SDLNSLSQLFSDTKKDYASRE---HDLITQLNDLNLEVDSFSKSIESNSSELQRKEE 1543
                  456666677777777777777777777766654.457777777777777777443...345567777777777777777777777776664 PP

  == domain 14  score: 7.0 bits;  conditional E-value: 0.0014
        Spc7  162 eeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiae 252 
                    +l++l  e+++  +++e++  +lq+++e l    ++++++l+++l++ ++e + +k +l+++++ +++l+e+ie ++++k+++ ee+  
  EPX74453.1 1514 ITQLNDLNLEVDSFSKSIESNSSELQRKEE-LIGGLNQKINNLQRDLESSSEEANTHKSDLENKRSLVNKLTERIEIVTKEKQSVSEELTG 1603
                  467888888888888899999999988555.555556789999999999999999999999999999999999999999999999998865 PP

  == domain 15  score: 3.0 bits;  conditional E-value: 0.024
        Spc7  135 qllegLkegleenlegleedkelLekqeeeldellpel...eeekaeleeeleklqeaaeeles...idkeeLeelreelaelkaeieekkkelael 225 
                  q +++L+  le+  e+ ++ k+ Le++++++++l +++   ++ek++++eel+ ++  +e+ ++    +++eL+ ++++l++ + e ++++ +l +l
  EPX74453.1 1550 QKINNLQRDLESSSEEANTHKSDLENKRSLVNKLTERIeivTKEKQSVSEELTGIKMSYEKANNklsATEAELHFVQDNLSKKEDESKKLSSNLHTL 1646
                  3344455555555555555555555555555554444311135555555555555553333333332334444444444444444444444444444 PP

        Spc7  226 qeqleelee 234 
                  +++ +e   
  EPX74453.1 1647 KKKTDEHMV 1655
                  444444333 PP

  == domain 16  score: 4.8 bits;  conditional E-value: 0.0066
        Spc7  150 gleedkelLekqeeeldellpeleeekaeleeeleklqeaaeelesid...keeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqk 243 
                  +l++ +++++++ + + +l + ++e+k++le+  ++ ++a ++l+s +    ++Le+ r  ++e ++ ie+++k  ++ +++l++lee++ +lk++ 
  EPX74453.1 1663 DLQNSANTINHHLATIGSLEKVISENKEKLEASSKETNAAIQQLDSEKrkiLKDLEQKRLLITEKNEIIESLQKFKNNSEDKLAKLEEELHTLKNSS 1759
                  4677777777777777777788888888888777777777777777552235789999999************************************ PP

        Spc7  244 seleeeiaeae 254 
                  +e+ ++++ ae
  EPX74453.1 1760 EEYVQKLQDAE 1770
                  *****999987 PP

  == domain 17  score: 2.9 bits;  conditional E-value: 0.026
        Spc7  137 legLkegleenlegleedkelLekqeeel...dellpeleeekaeleeeleklqeaaeeles..id.keeLeelreelaelkaeieekkkelaelqe 227 
                  +++L ++ +++l++le+ + l+++++e +   ++++++ e + a+leeel++l++ +ee  +   d + + ++l++ l++ ++e++ k ++ +elq+
  EPX74453.1 1703 IQQLDSEKRKILKDLEQKRLLITEKNEIIeslQKFKNNSEDKLAKLEEELHTLKNSSEEYVQklQDaECKANNLQNLLNRSNEELSVKDQQCKELQS 1799
                  68999999**************999877633378899******************7777555442336678999*********************** PP

        Spc7  228 qleeleekieelkeqksele 247 
                    ++l+   +elk+++s+l 
  EPX74453.1 1800 TQQSLTVVQNELKAKCSTLS 1819
                  *************9999875 PP

  == domain 18  score: 0.6 bits;  conditional E-value: 0.13
        Spc7  162 eeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeaervle 258 
                   ++l++ll++ +ee +   ++ ++lq+ +++  ++ ++eL++  ++l++l+  +   ++  +el+ +++++ e+i+  ++++++l +++++  + l 
  EPX74453.1 1773 ANNLQNLLNRSNEELSVKDQQCKELQSTQQS-LTVVQNELKAKCSTLSSLEDVLTGTQAHNTELEGEVKRSMERIKRRDDRCDHLASKVKKLHQQLS 1868
                  6889999999999999999999999997776.55678999999999999999999999999999999999999999999999999999999988877 PP

        Spc7  259 eckg 262 
                  ++++
  EPX74453.1 1869 QQHD 1872
                  6654 PP

  == domain 19  score: 0.5 bits;  conditional E-value: 0.13
        Spc7  137 legLkegleenlegleedkelLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleel. 232 
                  le++ +g + + ++le + ++ +++ +  d+  + l ++ ++l+++l ++ +   e e+    +L +l+++++++++ ++++ ++ +el  + + l 
  EPX74453.1 1821 LEDVLTGTQAHNTELEGEVKRSMERIKRRDDRCDHLASKVKKLHQQLSQQHDTFFEAEQKRILQLTNLKDTVKKQDKHLKKLIQKQDELVPRSTILv 1917
                  4555555555555555555555555555555555555555555555555555444455556777777777777777777766665555533333221 PP

        Spc7  233 .eekieelkeqkseleeeiae 252 
                   e+ i+++++++  l+e++++
  EPX74453.1 1918 yEAYIKDIEKEIIILQERLNS 1938
                  144455555555444444444 PP

>> BRE1  BRE1 E3 ubiquitin ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.2       4.2   6.8e+03      16      39 ..     123     146 ..     121     147 .. 0.70
   2 ?    5.3  14.3     0.013        21       3      94 ..     191     282 ..     180     283 .. 0.77
   3 ?    2.7  15.2      0.08   1.3e+02       8      76 ..     280     347 ..     278     357 .. 0.89
   4 ?    2.1   1.5      0.12     2e+02      49      84 ..     355     390 ..     350     409 .. 0.79
   5 ?   -1.6  14.3       1.8   2.9e+03       7      94 ..     414     501 ..     399     502 .. 0.91
   6 ?   -0.4  10.1      0.77   1.2e+03       7      94 ..     512     599 ..     506     600 .. 0.75
   7 ?    1.6   6.7      0.18     3e+02      15      91 ..     601     677 ..     594     681 .. 0.83
   8 ?    3.0  12.1     0.064     1e+02       1      80 [.     643     722 ..     643     742 .. 0.88
   9 !    7.0   0.8    0.0037       6.1       1      66 [.     747     812 ..     747     816 .. 0.92
  10 ?    3.5   5.7     0.047        76       2      81 ..     811     896 ..     810     912 .. 0.78
  11 ?   -1.1   3.7       1.2     2e+03       5      68 ..     923     986 ..     919     991 .. 0.70
  12 !   20.0   7.0   3.4e-07   0.00055       9      68 ..     990    1049 ..     987    1051 .. 0.96
  13 ?    0.9   7.9      0.31     5e+02      49      89 ..    1051    1097 ..    1048    1103 .. 0.84
  14 ?    0.8  10.8      0.32   5.2e+02       5      59 ..    1182    1236 ..    1178    1241 .. 0.89
  15 ?    2.5  11.0     0.095   1.5e+02       5      59 ..    1238    1292 ..    1234    1297 .. 0.91
  16 ?    2.7  10.6     0.081   1.3e+02       5      58 ..    1294    1347 ..    1290    1352 .. 0.91
  17 !   10.3   4.8   0.00034      0.55       5      67 ..    1350    1412 ..    1346    1421 .. 0.94
  18 ?    2.7   4.0     0.083   1.4e+02      36      93 ..    1460    1521 ..    1457    1523 .. 0.82
  19 ?    3.1   5.6     0.062     1e+02       4      70 ..    1523    1586 ..    1519    1595 .. 0.58
  20 ?   -0.0  11.7      0.58   9.5e+02      12      88 ..    1573    1649 ..    1567    1654 .. 0.89
  21 ?    1.0   5.6      0.28   4.5e+02       3      58 ..    1599    1654 ..    1597    1674 .. 0.86
  22 ?   -2.9  15.0       4.4   7.2e+03      29      95 .]    1685    1751 ..    1662    1751 .. 0.89
  23 ?    4.3   8.6     0.026        42       1      66 [.    1748    1813 ..    1748    1821 .. 0.90
  24 !    8.1   9.0    0.0017       2.7       2      92 ..    1794    1888 ..    1793    1889 .. 0.85
  25 ?    1.3  10.0      0.23   3.7e+02      11      85 ..    1838    1909 ..    1833    1928 .. 0.56

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 4.2
        BRE1  16 seqlskkvkeltileekklrleae 39 
                   q+s+++++l++  +k++ le e
  EPX74453.1 123 VTQNSSLIADLKAVRSKLATLEHE 146
                 457777777888777777777766 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.013
        BRE1   3 kELvklekafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdalenelkkLnkllsKsselieqLkelekefvrklkelek 94 
                 + L + + +  els+ql + ++ l   e++   + ++ +  + k    + s  +l++e  +L++ll  s+ +i  L ++e+ +++++k+ ek
  EPX74453.1 191 SALSSKQSEAYELSRQLLNVTQRLDQKEKEYETVIQDVKSMKDKMNHDQVSNSDLRAEQERLQRLLVSSNNTIGSLRQTETTLRSQCKDVEK 282
                 455555666666777777777777777777777777777777777777777888999999999999999999999999************99 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.08
        BRE1   8 lekafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdalenelkkLnkllsKsselie 76 
                 +ek   +l+e++s+k  e+++ +ek++ l+++ +k +  + a++++ ++len      +l++K+++l +
  EPX74453.1 280 VEKKLSALNESNSNK-DEIKDYQEKLQALTNQLKKKEHMIEALRKDTQSLENTSADNAELIEKNRKLEK 347
                 677777888888877.9***********************************************99865 PP

  == domain 4  score: 2.1 bits;  conditional E-value: 0.12
        BRE1  49 aamrskdalenelkkLnkllsKsselieqLkeleke 84 
                 +++ sk+ ++   +k+n+l  +ss+l+ +L+ le e
  EPX74453.1 355 SLKDSKEEITSMQNKINELEGRSSDLQYKLNTLEDE 390
                 566678888888888888888888888888887654 PP

  == domain 5  score: -1.6 bits;  conditional E-value: 1.8
        BRE1   7 klekafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdalenelkkLnkllsKsselieqLkelekefvrklkelek 94 
                 + ++  +  ++ql+++ + +t   + +  +++e ++   + +++  ++  l+n +   +k+l+ s+++i+q ++  ++++++l+e e+
  EPX74453.1 414 EKTESLNHSNQQLQELEARITETNKHLVLVTSERDRNSSEVKDLHEKITELQNLVTSSSKSLEDSQSIIAQKENEYSKLTSLLEEKER 501
                 5566778889999999999999999999**********************************************99999999999987 PP

  == domain 6  score: -0.4 bits;  conditional E-value: 0.77
        BRE1   7 klekafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdalenelkkLnkllsKsselieqLkelekefvrklkelek 94 
                 + ++  e l++q++k   ++++l+++++   + +ak   +y+++  s++   +e  + +k l+  ++l ++++++ k+ + +l ++ek
  EPX74453.1 512 SKNQYVETLKDQVKKYEDNIEDLTSELNERRNVIAKLGDEYKSLSASRNEELAEKEQAQKALADVQDLCKAFQDRLKDSTLSLRNMEK 599
                 5556667777888888888888888888888888888888888888888888888888888888888888888888888888888876 PP

  == domain 7  score: 1.6 bits;  conditional E-value: 0.18
        BRE1  15 lseqlskkvkeltileekklrleaekakadqkyfaamrskdalenelkkLnkllsKsselieqLkelekefvrklke 91 
                 l+e+ ++  +e++ l+ +++r+++  ++ d   + ++ ++ +l+++ + L+++++ +s + + L+ + +e+++k  +
  EPX74453.1 601 LEESQNSNGEEVHTLKAELSRIKSSLDEKDSYVYKVNEQIMSLNKDFNDLQANNEEQSRSYDSLNASFAELQKKFND 677
                 45555666788999**********************************************99999966666666554 PP

  == domain 8  score: 3.0 bits;  conditional E-value: 0.064
        BRE1   1 lqkELvklekafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdalenelkkLnkllsKsselieqLke 80 
                 l+k   +l++  ee+s++ +++ ++++ l++k +  + + +  + +++ ++ s  +l+     L+kl + +++l++qL+ 
  EPX74453.1 643 LNKDFNDLQANNEEQSRSYDSLNASFAELQKKFNDSQEMNNSMESEIKTLRDSLSKLDETEDSLRKLEEHNRDLSDQLNV 722
                 5777889999*******************************************************************986 PP

  == domain 9  score: 7.0 bits;  conditional E-value: 0.0037
        BRE1   1 lqkELvklekafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdalenelkkLnk 66 
                 l++ L+++++ +++ ++++  +++  ++le k +  ++  +k   +  ++m+ kd    e+ +L++
  EPX74453.1 747 LESKLDSCQRSYDDSQSEVTYLKSMNESLEAKHSTFSSSFEKISTELQSVMKVKDETFGECCRLKQ 812
                 67889**************************************************98877777766 PP

  == domain 10  score: 3.5 bits;  conditional E-value: 0.047
        BRE1   2 qkELvklekafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdalenelkkLnkllsKsselieqLke......l 81 
                 ++ L +l+++++els+  s +++ +++ ee  + l ++ +k  +++  ++ s +++   l   +  ++  ++  ++L++      +
  EPX74453.1 811 KQCLTSLTEEYKELSSDYSGLKQAYQNSEESNNNLRVNSSKLTEEIGHLKSSLQNVVSSLSSSKVVMNSLTDANKRLQDelavlrS 896
                 5678999*********************************9999999988888887777777777777777777777774444441 PP

  == domain 11  score: -1.1 bits;  conditional E-value: 1.2
        BRE1   5 LvklekafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdalenelkkLnkll 68 
                 L++ ++  ++l+++++    ++ +le++k  l +ek+   qk  ++  + ++   +l +L  l+
  EPX74453.1 923 LQSATETEKNLRSENDGYAGKICALEQEKEGLFKEKEDLNQKALSLADEVKDKIEKLSNLEVLH 986
                 5666666677777777777788888888888888888888887777766666666666666555 PP

  == domain 12  score: 20.0 bits;  conditional E-value: 3.4e-07
        BRE1    9 ekafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdalenelkkLnkll 68  
                  e++f++++++ls+k k l+   e +++le ek+   ++++ +m sk+++e el++Ln++l
  EPX74453.1  990 EEEFKNARDELSEKSKILSQTMEIVKQLEEEKSTTGKEIKHLMSSKENIEEELRTLNSSL 1049
                  899******************************************************987 PP

  == domain 13  score: 0.9 bits;  conditional E-value: 0.31
        BRE1   49 aamrskdalenelkkLnkllsKsselieqLke......lekefvrkl 89  
                  +++rs ++  +e  +L+++l Ks+++i++L+       lek++ +k 
  EPX74453.1 1051 SLQRSLEDQIAEKENLSEKLVKSQDSISALEKdqesvlLEKNNLQKS 1097
                  789999************************99877877777766665 PP

  == domain 14  score: 0.8 bits;  conditional E-value: 0.32
        BRE1    5 Lvklekafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdalen 59  
                  L + +++f +++++ + + ++l   e+  ++le + +  d+k  +am++ ++ e+
  EPX74453.1 1182 LAQKSQEFSDVQSEKNLLNQQLYEAENSSKKLEEKNTAMDNKLLDAMKQLKDTEA 1236
                  6778999*****************************************9988765 PP

  == domain 15  score: 2.5 bits;  conditional E-value: 0.095
        BRE1    5 Lvklekafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdalen 59  
                  L + +++f +++++ + + ++l+  e+  ++le + +  d+k  +am++ ++ e+
  EPX74453.1 1238 LAQKSQEFSDVQSEKDLLNQQLSEAENSSKKLEEKNTAMDNKLLDAMKQLKDTEA 1292
                  67789*******************************************9998765 PP

  == domain 16  score: 2.7 bits;  conditional E-value: 0.081
        BRE1    5 Lvklekafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdale 58  
                  L + +++f +++++ + + ++l+  e+  ++le + +  d+k  +am++ ++ e
  EPX74453.1 1294 LAQKSQEFSDVQSEKNLLNQQLSEAENSSKKLEEKNTAMDNKLLDAMKQLKDTE 1347
                  67789*******************************************998866 PP

  == domain 17  score: 10.3 bits;  conditional E-value: 0.00034
        BRE1    5 LvklekafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdalenelkkLnkl 67  
                  L + +++f  ++++ + + ++++  ee+++ l++ +a+ ++  +++  ++d++ +e+  Ln+l
  EPX74453.1 1350 LAQKSQEFSYVQSEKDLLNQQFSEAEENISSLHQSIAQFENDKKELSAKIDSIGKENEELNSL 1412
                  778899*******************************************************87 PP

  == domain 18  score: 2.7 bits;  conditional E-value: 0.083
        BRE1   36 leaekakadqkyfaamrskdalenelkkLnkllsKsselieqLke....lekefvrklkele 93  
                  l+++    + +  +   + d+l nel+++++ l+  s+l ++ k     +e++++++l +l+
  EPX74453.1 1460 LTNKLRNKETELQDRIQDADTLSNELRNVRSDLNSLSQLFSDTKKdyasREHDLITQLNDLN 1521
                  5566666666666666789999*********999999999999999999********99886 PP

  == domain 19  score: 3.1 bits;  conditional E-value: 0.062
        BRE1    4 ELvklekafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdalenelkkLnkllsK 70  
                  E+++ +k +e  s++l+ k + +  l +k++ l+ + +   ++   a+ +k +len+   +nkl ++
  EPX74453.1 1523 EVDSFSKSIESNSSELQRKEELIGGLNQKINNLQRDLESSSEE---ANTHKSDLENKRSLVNKLTER 1586
                  6666666666666666666666666666666666666666554...444455555554444444443 PP

  == domain 20  score: -0.0 bits;  conditional E-value: 0.58
        BRE1   12 feelseqlskkvkeltileekklrleaekakadqkyfaamrskdalenelkkLnkllsKsselieqLkelekefvrk 88  
                   e+ +++++k+++ ++i +++k+ ++ e +  +  y  a+++  a e+el  ++ +lsK+ + +++L    + +++k
  EPX74453.1 1573 LENKRSLVNKLTERIEIVTKEKQSVSEELTGIKMSYEKANNKLSATEAELHFVQDNLSKKEDESKKLSSNLHTLKKK 1649
                  5778899***********************************************************99866666555 PP

  == domain 21  score: 1.0 bits;  conditional E-value: 0.28
        BRE1    3 kELvklekafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdale 58  
                   EL  ++  +e+++++ls+  +el+  ++++++ e e +k       ++++ d  +
  EPX74453.1 1599 EELTGIKMSYEKANNKLSATEAELHFVQDNLSKKEDESKKLSSNLHTLKKKTDEHM 1654
                  7999999999******************9999999999999999999999988776 PP

  == domain 22  score: -2.9 bits;  conditional E-value: 4.4
        BRE1   29 leekklrleaekakadqkyfaamrskdalenelkkLnkllsKsselieqLkelekefvrklkeleke 95  
                    e+k +lea  ++    + +++ +k+++ ++l + + l++ ++e+ie L+   ++   kl++le+e
  EPX74453.1 1685 ISENKEKLEASSKETNAAIQQLDSEKRKILKDLEQKRLLITEKNEIIESLQKFKNNSEDKLAKLEEE 1751
                  568889999999999999999999****************************************987 PP

  == domain 23  score: 4.3 bits;  conditional E-value: 0.026
        BRE1    1 lqkELvklekafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdalenelkkLnk 66  
                  l+ EL  l++  ee  ++l++   +  +l++ ++r + e +  dq++++++   ++l+   + L++
  EPX74453.1 1748 LEEELHTLKNSSEEYVQKLQDAECKANNLQNLLNRSNEELSVKDQQCKELQSTQQSLTVVQNELKA 1813
                  678**********************************************99998888877777766 PP

  == domain 24  score: 8.1 bits;  conditional E-value: 0.0017
        BRE1    2 qkELvklekafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdalenelkkLnkllsKsselieqLke....lekefvrklkel 92  
                   kEL++ ++    ++++l++k + l++le+ ++ ++a  ++ + + +  m  ++ ++  + +L ++++K  +  +q ++    +e + + +l++l
  EPX74453.1 1794 CKELQSTQQSLTVVQNELKAKCSTLSSLEDVLTGTQAHNTELEGEVKRSMERIKRRDDRCDHLASKVKKLHQQLSQQHDtffeAEQKRILQLTNL 1888
                  69************************************999999999888888888888888888888877777777778866666666666665 PP

  == domain 25  score: 1.3 bits;  conditional E-value: 0.23
        BRE1   11 afeelseqlskkvkeltileekklrleaekakadqkyfaamrskdalenelkkLnkllsKsselieqLkelekef 85  
                  + +   e ++       +l +k+++l+++ ++++  +f+a+ +   +  +l +L+  ++K+ ++ ++L + + e+
  EPX74453.1 1838 EVKRSMERIKRRDDRCDHLASKVKKLHQQLSQQHDTFFEAEQK---RILQLTNLKDTVKKQDKHLKKLIQKQDEL 1909
                  4444444444555555566667777777777777776666643...33344444444444444444444433333 PP

>> DUF745  Protein of unknown function (DUF745)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   8.2       1.2     2e+03      67     164 ..     182     279 ..     179     283 .. 0.77
   2 ?   -1.9  10.1       1.4   2.3e+03      79     157 ..     253     334 ..     239     345 .. 0.59
   3 !    6.7   6.5    0.0033       5.4      66     160 ..     344     438 ..     336     446 .. 0.78
   4 !    8.4   5.5   0.00096       1.6      69     160 ..     452     543 ..     448     548 .. 0.92
   5 ?    4.4   5.8     0.017        28      64     143 ..     531     617 ..     527     651 .. 0.61
   6 ?    4.5   4.1     0.016        25      66     142 ..     621     697 ..     614     725 .. 0.82
   7 !    6.4   0.7    0.0042       6.9      73     168 ..     746     841 ..     736     846 .. 0.89
   8 !    7.1   1.5    0.0024       3.9      66     124 ..     851     909 ..     846     938 .. 0.85
   9 ?   -0.7   4.3       0.6   9.8e+02      94     158 ..     964    1024 ..     918    1037 .. 0.72
  10 ?   -2.5   9.4       2.2   3.5e+03      66     138 ..     988    1060 ..     958    1087 .. 0.79
  11 ?   -0.9   7.8      0.69   1.1e+03      66     131 ..    1093    1158 ..    1063    1169 .. 0.60
  12 ?   -2.2  18.6       1.7   2.8e+03      67     167 ..    1171    1271 ..    1167    1277 .. 0.94
  13 ?   -3.2  17.6       3.5   5.7e+03      69     167 ..    1285    1383 ..    1269    1390 .. 0.92
  14 !   19.5   3.7   3.9e-07   0.00064      78     180 ..    1517    1621 ..    1496    1624 .. 0.88
  15 ?   -2.9  10.4         3   4.8e+03      66     166 ..    1645    1749 ..    1629    1765 .. 0.70
  16 ?    3.8   5.2     0.026        43      60     121 ..    1727    1788 ..    1721    1793 .. 0.90
  17 ?    4.2   9.8      0.02        32      60     164 ..    1772    1876 ..    1770    1882 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 1.2
      DUF745  67 leqelreaeavvqeekkslqsseanakaaakaakqaqqqlealkallkaakenlenaeqvaagaqqelaektqlleaAkkRveeLkkqlkearkdlek 164
                  +++++e e+++++ +++  + ++++  +++  +q ++++e++ + +k++k+++++ +  ++   +e +  + ll ++++ + +L++  ++ r+  ++
  EPX74453.1 182 FQKKVSELESALSSKQSEAYELSRQLLNVTQRLDQKEKEYETVIQDVKSMKDKMNHDQVSNSDLRAEQERLQRLLVSSNNTIGSLRQTETTLRSQCKD 279
                 57889999999988777666666666666666777888899999999999999999999999999999999999999999999988876666655554 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.4
      DUF745  79 qeekkslqsseanakaaakaakqaqqqlealkallkaakenlenaeqvaagaq...qelaektqlleaAkkRveeLkkqlke 157
                 q+   s +++  +++ ++++ ++  + +e   ++l+++++n +++++ +++ q   ++l++k++++ea +k  ++L++  ++
  EPX74453.1 253 QRLLVSSNNTIGSLRQTETTLRSQCKDVEKKLSALNESNSNKDEIKDYQEKLQaltNQLKKKEHMIEALRKDTQSLENTSAD 334
                 4444444444444444444444444555555556666666666666665555422278999999999999999999876655 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.0033
      DUF745  66 qleqelreaeavvqeekkslqsseanakaaakaakqaqqqlealkallkaakenlenaeqvaagaqqelaektqlleaAkkRveeLkkqlkeark 160
                 +le+ lr   a +++ k++++s +++++  +  +++ q +l++l++   ++ +  ++++++ ++++ +l+ekt+ l++++++++eL+ +++e  k
  EPX74453.1 344 KLEKILRSSIASLKDSKEEITSMQNKINELEGRSSDLQYKLNTLEDESGEFDSVKHHLQATLEESNYKLSEKTESLNHSNQQLQELEARITETNK 438
                 46666666677777777788888888888888888888888888888888888888888888888888999999999999999999988887665 PP

  == domain 4  score: 8.4 bits;  conditional E-value: 0.00096
      DUF745  69 qelreaeavvqeekkslqsseanakaaakaakqaqqqlealkallkaakenlenaeqvaagaqqelaektqlleaAkkRveeLkkqlkeark 160
                 +e+++ ++ + e ++ ++ss+++++  +++ +q +++++ l++ll++ +  l ++++ + + +q ++  ++ +++ +  +e L+++l+e r+
  EPX74453.1 452 SEVKDLHEKITELQNLVTSSSKSLEDSQSIIAQKENEYSKLTSLLEEKERLLFESKNESVSKNQYVETLKDQVKKYEDNIEDLTSELNERRN 543
                 7999************************************************9999999999999999999999999999999999998775 PP

  == domain 5  score: 4.4 bits;  conditional E-value: 0.017
      DUF745  64 veqleqelreaeavvqeekkslqsseanaka.......aakaakqaqqqlealkallkaakenlenaeqvaagaqqelaektqllea 143
                 +e l++el+e  +v+ +  ++++s +a+ +        a+ka +++q  ++a+++ lk ++ +l+n+e++ +++q++  e  + l+a
  EPX74453.1 531 IEDLTSELNERRNVIAKLGDEYKSLSASRNEelaekeqAQKALADVQDLCKAFQDRLKDSTLSLRNMEKLLEESQNSNGEEVHTLKA 617
                 789999999999999887666665444444400000014444445555555555555566666666666666666655555444444 PP

  == domain 6  score: 4.5 bits;  conditional E-value: 0.016
      DUF745  66 qleqelreaeavvqeekkslqsseanakaaakaakqaqqqlealkallkaakenlenaeqvaagaqqelaektqlle 142
                 +++++l e ++ v ++++++ s ++  +  ++ +++  +++++l+a +++ ++++++++++++++++e++  ++ l 
  EPX74453.1 621 RIKSSLDEKDSYVYKVNEQIMSLNKDFNDLQANNEEQSRSYDSLNASFAELQKKFNDSQEMNNSMESEIKTLRDSLS 697
                 67789999999***************************************************999999886555554 PP

  == domain 7  score: 6.4 bits;  conditional E-value: 0.0042
      DUF745  73 eaeavvqeekkslqsseanakaaakaakqaqqqlealkallkaakenlenaeqvaagaqqelaektqlleaAkkRveeLkkqlkearkdlektkka 168
                 + e+ +++ ++s+  s++ ++  ++++++ +++ +++++ +++++++l+++ +v+++   e    +q l++  +  +eL+++ +  ++ +++ +++
  EPX74453.1 746 NLESKLDSCQRSYDDSQSEVTYLKSMNESLEAKHSTFSSSFEKISTELQSVMKVKDETFGECCRLKQCLTSLTEEYKELSSDYSGLKQAYQNSEES 841
                 56778889999999***********************************************99999999999999999999999999999988775 PP

  == domain 8  score: 7.1 bits;  conditional E-value: 0.0024
      DUF745  66 qleqelreaeavvqeekkslqsseanakaaakaakqaqqqlealkallkaakenlenae 124
                 +l++e+ + ++ +q++ +sl+ss+  +++ ++a+k  q +l++l++  + ++++l++ +
  EPX74453.1 851 KLTEEIGHLKSSLQNVVSSLSSSKVVMNSLTDANKRLQDELAVLRSNHEGVTKQLNSDR 909
                 7999*****************************************99999988887654 PP

  == domain 9  score: -0.7 bits;  conditional E-value: 0.6
      DUF745   94 aaakaakqaqqqlealkallkaakenlenaeqvaagaqqelaektqlleaAkkRveeLkkqlkea 158 
                   a + a++++ ++e l++l    +   ++ e+  ++a  el+ek+++l +  + v++L+++ ++ 
  EPX74453.1  964 KALSLADEVKDKIEKLSNL----EVLHSSREEEFKNARDELSEKSKILSQTMEIVKQLEEEKSTT 1024
                  4555555555555555443....4444555666788999***********999999999876665 PP

  == domain 10  score: -2.5 bits;  conditional E-value: 2.2
      DUF745   66 qleqelreaeavvqeekkslqsseanakaaakaakqaqqqlealkallkaakenlenaeqvaagaqqelaekt 138 
                  + e+e ++a + ++e +k l+++ + +k  ++ +++  ++++ l +  ++++e+l+++++  a+ q++l+++ 
  EPX74453.1  988 SREEEFKNARDELSEKSKILSQTMEIVKQLEEEKSTTGKEIKHLMSSKENIEEELRTLNSSLASLQRSLEDQI 1060
                  5578888888888888888888888888888888888888888888888888888888888888887777664 PP

  == domain 11  score: -0.9 bits;  conditional E-value: 0.69
      DUF745   66 qleqelreaeavvqeekkslqsseanakaaakaakqaqqqlealkallkaakenlenaeqvaagaq 131 
                  +l+++  + e++++++++s++s ++  ++ ++  ++ +  ++ lk+l ++  e+++++e+++++ +
  EPX74453.1 1093 NLQKSKVDLEQALESVERSYASLSEEHRSIRDEYQSLEDAFSKLKELNQKLIEKISQSEDLSKQLK 1158
                  456666666666666666666666666666666666666666666666666666666666555543 PP

  == domain 12  score: -2.2 bits;  conditional E-value: 1.7
      DUF745   67 leqelreaeavvqeekkslqsseanakaaakaakqaqqqlealkallkaakenlenaeqvaagaqqelaektqlleaAkkRveeLkkqlkearkdle 163 
                  ++++l+++ea++ + +++ +  ++  ++ ++   +a+++ + l++   a+ ++l +a +  +  ++ la+k+q   + ++  + L++ql+ea +  +
  EPX74453.1 1171 TTKQLKDTEAMLAQKSQEFSDVQSEKNLLNQQLYEAENSSKKLEEKNTAMDNKLLDAMKQLKDTEAMLAQKSQEFSDVQSEKDLLNQQLSEAENSSK 1267
                  5789****************************************************************************************99877 PP

      DUF745  164 ktkk 167 
                  k ++
  EPX74453.1 1268 KLEE 1271
                  7655 PP

  == domain 13  score: -3.2 bits;  conditional E-value: 3.5
      DUF745   69 qelreaeavvqeekkslqsseanakaaakaakqaqqqlealkallkaakenlenaeqvaagaqqelaektqlleaAkkRveeLkkqlkearkdlekt 165 
                  ++l+++ea++ + +++ +  ++  ++ ++  ++a+++ + l++   a+ ++l +a +  +  ++ la+k+q     ++  + L++q++ea ++  + 
  EPX74453.1 1285 KQLKDTEAMLAQKSQEFSDVQSEKNLLNQQLSEAENSSKKLEEKNTAMDNKLLDAMKQLKDTETMLAQKSQEFSYVQSEKDLLNQQFSEAEENISSL 1381
                  789**************************************************999999*******************************9987766 PP

      DUF745  166 kk 167 
                   +
  EPX74453.1 1382 HQ 1383
                  55 PP

  == domain 14  score: 19.5 bits;  conditional E-value: 3.9e-07
      DUF745   78 vqeekkslqsseanakaaakaakqaqqqlealkallkaakenlenaeqvaagaqqelaektqlleaAkkRveeLkkqlkearkdlektkkaAykAac 174 
                  +++ + ++ s ++++++ ++  +  ++ +  l++ +++ +  le++ + a+  +++l++k++l+++  +R+e ++k+ +++ ++l+ +k + +kA+ 
  EPX74453.1 1517 LNDLNLEVDSFSKSIESNSSELQRKEELIGGLNQKINNLQRDLESSSEEANTHKSDLENKRSLVNKLTERIEIVTKEKQSVSEELTGIKMSYEKANN 1613
                  55556666677788888889999999999******************************************************************85 PP

      DUF745  175 ..AAqeAk 180 
                    +A eA+
  EPX74453.1 1614 klSATEAE 1621
                  33788775 PP

  == domain 15  score: -2.9 bits;  conditional E-value: 3
      DUF745   66 qleqelreaeavvqeekkslqsseanak....aaakaakqaqqqlealkallkaakenlenaeqvaagaqqelaektqlleaAkkRveeLkkqlkea 158 
                   l+++  e    ++  +  lq+s ++++    +  +  k + ++ e l+a  k+++++++++++ + +  ++l++k+ l+++ ++ +e+L+k  ++ 
  EPX74453.1 1645 TLKKKTDEHMVLIKGYEVDLQNSANTINhhlaTIGSLEKVISENKEKLEASSKETNAAIQQLDSEKRKILKDLEQKRLLITEKNEIIESLQKFKNNS 1741
                  5666666666666666666776666555111133445566677777888888888888888888888888888888888888888888888776666 PP

      DUF745  159 rkdlektk 166 
                   + l+k +
  EPX74453.1 1742 EDKLAKLE 1749
                  66666555 PP

  == domain 16  score: 3.8 bits;  conditional E-value: 0.026
      DUF745   60 Kqqlveqleqelreaeavvqeekkslqsseanakaaakaakqaqqqlealkallkaakenle 121 
                  K+ ++e+l++  ++ e+ + + +++l++ +++ +   +  ++a+ +++ l++ll+ ++e+l+
  EPX74453.1 1727 KNEIIESLQKFKNNSEDKLAKLEEELHTLKNSSEEYVQKLQDAECKANNLQNLLNRSNEELS 1788
                  89999*************************999999999**************999998876 PP

  == domain 17  score: 4.2 bits;  conditional E-value: 0.02
      DUF745   60 KqqlveqleqelreaeavvqeekkslqsseanakaaakaakqaqqqlealkallkaakenlenaeqvaagaqqelaektqlleaAkkRveeLkkqlk 156 
                  K   +++l +  +e  +v +++ k+lqs++++++++++  k   + l++l+++l  +++  +++e   + + + ++ + +  ++  ++v++L++ql+
  EPX74453.1 1772 KANNLQNLLNRSNEELSVKDQQCKELQSTQQSLTVVQNELKAKCSTLSSLEDVLTGTQAHNTELEGEVKRSMERIKRRDDRCDHLASKVKKLHQQLS 1868
                  77889999999999999*******************************************************************************9 PP

      DUF745  157 earkdlek 164 
                  + ++ + +
  EPX74453.1 1869 QQHDTFFE 1876
                  98877655 PP

>> UPF0242  Uncharacterised protein family (UPF0242) N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2  12.8      0.55     9e+02      56     153 ..     154     254 ..     119     269 .. 0.59
   2 !   17.9  20.1   1.6e-06    0.0027      68     189 ..     275     387 ..     262     389 .. 0.78
   3 ?    2.2  15.6       0.1   1.7e+02      87     177 ..     405     494 ..     392     499 .. 0.73
   4 ?    3.9  19.0      0.03        49      61     179 ..     500     640 ..     493     650 .. 0.51
   5 !    7.2  15.4     0.003       4.9      67     153 ..     651     736 ..     632     753 .. 0.84
   6 !    7.9   0.9    0.0018         3      93     151 ..     746     804 ..     736     809 .. 0.86
   7 ?    3.8   2.4     0.033        55      88     142 ..     811     865 ..     806     892 .. 0.81
   8 ?   -1.7  12.4       1.6   2.6e+03      79     169 ..     915    1004 ..     867    1006 .. 0.65
   9 ?    2.0  20.5      0.12   1.9e+02      70     176 ..     972    1081 ..     969    1089 .. 0.60
  10 ?    1.7  16.0      0.14   2.3e+02      82     152 ..    1103    1176 ..    1081    1183 .. 0.53
  11 ?    2.9  12.2     0.063     1e+02      75     137 ..    1173    1235 ..    1166    1242 .. 0.83
  12 !    5.8  13.3    0.0079        13      77     154 ..    1231    1304 ..    1227    1305 .. 0.85
  13 ?    2.1  23.2      0.11   1.9e+02      77     177 ..    1287    1390 ..    1282    1405 .. 0.69
  14 !   16.0  10.9   6.2e-06      0.01      75     183 ..    1444    1556 ..    1408    1560 .. 0.82
  15 ?   -1.8  12.3       1.8   2.9e+03      77     162 ..    1559    1647 ..    1554    1657 .. 0.49
  16 !    9.5  19.7   0.00059      0.96      51     176 ..    1654    1777 ..    1652    1779 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.55
     UPF0242  56 kwekalkeklekskleekeaklteld......eglktkeealeelqeeeeeLkeeldakeeelerlkeenqqLqekleaiaedfeelkleleeqLaekq 148
                  ++k  +e++ek+    +   lt+ +      +++++ e al   q+e  eL ++l + ++ l + ++e + +  +  ++ +d  ++ + +++ L+ +q
  EPX74453.1 154 LMSKSNREGWEKNPS--DMDALTSSEdyqyfqKKVSELESALSSKQSEAYELSRQLLNVTQRLDQKEKEYETVI-QDVKSMKDKMNHDQVSNSDLRAEQ 249
                 445555555554433..233333333356666666667777777777777777775555555555555555444.444445555555555555555555 PP

     UPF0242 149 ellqe 153
                 e+lq 
  EPX74453.1 250 ERLQR 254
                 54443 PP

  == domain 2  score: 17.9 bits;  conditional E-value: 1.6e-06
     UPF0242  68 skleekeaklteldeglktkeealeelqeeeeeLkeeldakeeelerlkeenqqLqekleaiaedfeelkleleeqLaekqellqeyqetieeqrsvle 166
                 s+ +  e+kl++l+e  + +++++++ qe+ + L ++l++ke+ +e l+++ q+L+    ++++d++el  e +   ++ ++ l  + +++++ ++++ 
  EPX74453.1 275 SQCKDVEKKLSALNE-SNSNKDEIKDYQEKLQALTNQLKKKEHMIEALRKDTQSLE----NTSADNAELI-EKN---RKLEKILRSSIASLKDSKEEIT 364
                 344444555555553.3477889*******************************99....4555666653.222...33456788899999******** PP

     UPF0242 167 krqdqieqLeskVrDlnyEiktL 189
                 + q++i++Le + +Dl+y + tL
  EPX74453.1 365 SMQNKINELEGRSSDLQYKLNTL 387
                 *********************98 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.1
     UPF0242  87 keealeelqeeeeeLkeeldakeeelerlkeenqqLqekleaiaedfeelkleleeqLaekqellqeyqetieeqrsvlekrqdqieqLes 177
                  ee+  +l e++e L++  ++ +e+ +r +e n++L   +++    ++   ++l e++ e q+l+  + +++e+ +s + +++++ ++L s
  EPX74453.1 405 LEESNYKLSEKTESLNHSNQQLQELEARITETNKHLVLVTSERD-RNSSEVKDLHEKITELQNLVTSSSKSLEDSQSIIAQKENEYSKLTS 494
                 33344455666666666666677777777788888886666633.455556799999*************************999999876 PP

  == domain 4  score: 3.9 bits;  conditional E-value: 0.03
     UPF0242  61 lkekl.ekskleekeaklteldeglktkeealeelqeeeeeLkeeldakeeelerlk.eenqqLqekleaiae.........dfeelkleleeqLaekq 148
                 +++ +  k++  +k++ +  l++++k+ e+++e+l++e +e+++ +++   e + l   +n++L ek +a ++          f++ ++++   L++ +
  EPX74453.1 500 ERLLFeSKNESVSKNQYVETLKDQVKKYEDNIEDLTSELNERRNVIAKLGDEYKSLSaSRNEELAEKEQAQKAladvqdlckAFQDRLKDSTLSLRNME 598
                 333332233344555555566689999999999999999999999555555555443134445544333322244444444444444444444444444 PP

     UPF0242 149 ...........ellqeyqetieeqrsvlekrqdqieqLeskV 179
                            e +++++++++  +s+l++++ ++++ + ++
  EPX74453.1 599 klleesqnsngEEVHTLKAELSRIKSSLDEKDSYVYKVNEQI 640
                 000000011113445555555556666666666666655555 PP

  == domain 5  score: 7.2 bits;  conditional E-value: 0.003
     UPF0242  67 kskleekeaklteldeglktkeealeelqeeeeeLkeeldakeeelerlkeenqqLqekleaiaedfeelkleleeqLaekqellqe 153
                 + ++ee+ +   +l+ ++++ +++ +++qe ++ ++ e++     l +l e + +L+ kle+  +d ++++  +++q++ek++ +  
  EPX74453.1 651 QANNEEQSRSYDSLNASFAELQKKFNDSQEMNNSMESEIKTLRDSLSKLDETEDSLR-KLEEHNRDLSDQLNVYKDQVEEKENFIIS 736
                 456788999999999******************************************.9**********************987754 PP

  == domain 6  score: 7.9 bits;  conditional E-value: 0.0018
     UPF0242  93 elqeeeeeLkeeldakeeelerlkeenqqLqekleaiaedfeelkleleeqLaekqell 151
                 +l+++ +  ++ +d  ++e+  lk  n++L+ k +  +  fe+ + el++ ++ k e +
  EPX74453.1 746 NLESKLDSCQRSYDDSQSEVTYLKSMNESLEAKHSTFSSSFEKISTELQSVMKVKDETF 804
                 567788888888**************************************999998876 PP

  == domain 7  score: 3.8 bits;  conditional E-value: 0.033
     UPF0242  88 eealeelqeeeeeLkeeldakeeelerlkeenqqLqekleaiaedfeelklelee 142
                 ++ l  l+ee +eL   ++  +++ ++ +e n++L++  ++  e++ +lk  l++
  EPX74453.1 811 KQCLTSLTEEYKELSSDYSGLKQAYQNSEESNNNLRVNSSKLTEEIGHLKSSLQN 865
                 6778899999999999999999999999999999999999999988877766654 PP

  == domain 8  score: -1.7 bits;  conditional E-value: 1.6
     UPF0242   79 eldeglktkeealeelqeeeeeLkeeldakeeelerlkeenqqLqekleaiae...dfeelkleleeqLaekqellqeyqetieeqrsvlekrq 169 
                  + d      e  l+ ++e e++L+ e d    ++  l++e++ L +++e+  +     ++  ++  e+L + + l++  +e++++ r +l ++ 
  EPX74453.1  915 ASD----LYESLLQSATETEKNLRSENDGYAGKICALEQEKEGLFKEKEDLNQkalSLADEVKDKIEKLSNLEVLHSSREEEFKNARDELSEKS 1004
                  222....233367777788888888888888888888888888888888877733333444444445666778889999999999999998885 PP

  == domain 9  score: 2.0 bits;  conditional E-value: 0.12
     UPF0242   70 leekeaklteldeglktkeealeelqeeeeeLkeeldakeeelerlkeenq....qLqekleaiaedfeelkleleeqLaekqellqeyqetieeqr 162 
                  ++ k++kl++l+  ++  ee+ +++++e  e  + l++  e +++l+ee+     +++  l  ++e++ee ++ l++ La  q  l++  ++ e++ 
  EPX74453.1  972 VKDKIEKLSNLEVLHSSREEEFKNARDELSEKSKILSQTMEIVKQLEEEKSttgkEIK-HLMSSKENIEEELRTLNSSLASLQRSLEDQIAEKENLS 1067
                  5677778888886666666666666666666666666666666666666664432333.34444556666666666666666666666666666666 PP

     UPF0242  163 svlekrqdqieqLe 176 
                  + l k qd i+ Le
  EPX74453.1 1068 EKLVKSQDSISALE 1081
                  66666666666666 PP

  == domain 10  score: 1.7 bits;  conditional E-value: 0.14
     UPF0242   82 eglktkeealeelqeeeeeLkeeldakeeelerlkeenqqLqekleaiae....dfeelkleleeqLaekqellq 152 
                  + l+  e +   l ee++  ++e+++ e +  +lke nq+L ek ++ +e    + +e   +++++L   +++l+
  EPX74453.1 1103 QALESVERSYASLSEEHRSIRDEYQSLEDAFSKLKELNQKLIEKISQ-SEdlskQLKEKNAAVDDKLLDTTKQLK 1176
                  23444444555667777778888888888888888888888887777.440222444444444444444444444 PP

  == domain 11  score: 2.9 bits;  conditional E-value: 0.063
     UPF0242   75 aklteldeglktkeealeelqeeeeeLkeeldakeeelerlkeenqqLqekleaiaedfeelk 137 
                  ++l++++  l++k ++  ++q+e++ L+++l + e+ +++l+e+n  +  kl ++ ++ ++  
  EPX74453.1 1173 KQLKDTEAMLAQKSQEFSDVQSEKNLLNQQLYEAENSSKKLEEKNTAMDNKLLDAMKQLKDTE 1235
                  44556666799*****************************************99888766543 PP

  == domain 12  score: 5.8 bits;  conditional E-value: 0.0079
     UPF0242   77 lteldeglktkeealeelqeeeeeLkeeldakeeelerlkeenqqLqekleaiaedfeelkleleeqLaekqellqey 154 
                  l++++  l++k ++  ++q+e++ L+++l++ e+ +++l+e+n  +  kl ++ +    ++++ e+ La+k + +++ 
  EPX74453.1 1231 LKDTEAMLAQKSQEFSDVQSEKDLLNQQLSEAENSSKKLEEKNTAMDNKLLDAMK----QLKDTEAMLAQKSQEFSDV 1304
                  5555667999****************************************99655....5677888888888887765 PP

  == domain 13  score: 2.1 bits;  conditional E-value: 0.11
     UPF0242   77 lteldeglktkeealeelqeeeeeLkeeldakeeelerlkeenqqLqekleaiae...dfeelkleleeqLaekqellqeyqetieeqrsvlekrqd 170 
                  l++++  l++k ++  ++q+e++ L+++l++ e+ +++l+e+n  +  kl ++ +   d e ++ +  ++  + q   + ++++++e  + + +  +
  EPX74453.1 1287 LKDTEAMLAQKSQEFSDVQSEKNLLNQQLSEAENSSKKLEEKNTAMDNKLLDAMKqlkDTETMLAQKSQEFSYVQSEKDLLNQQFSEAEENISSLHQ 1383
                  5556667999***************************************999888555444444444455555555555555555555555555555 PP

     UPF0242  171 qieqLes 177 
                   i+q e 
  EPX74453.1 1384 SIAQFEN 1390
                  5544443 PP

  == domain 14  score: 16.0 bits;  conditional E-value: 6.2e-06
     UPF0242   75 aklteld....eglktkeealeelqeeeeeLkeeldakeeelerlkeenqqLqekleaiaedfeelkleleeqLaekqellqeyqetieeqrsvlek 167 
                  + + e      + +k+  ++l++ + e +++ +  d  ++el++ + + ++L++  +++++d++    +l  qL+  ++ ++ + ++ie+  s+l++
  EPX74453.1 1444 SEILEATslftNCFKELTNKLRNKETELQDRIQDADTLSNELRNVRSDLNSLSQLFSDTKKDYASREHDLITQLNDLNLEVDSFSKSIESNSSELQR 1540
                  33333334665677888889999999999999999999999999999999***999***************************************** PP

     UPF0242  168 rqdqieqLeskVrDln 183 
                  +++ i+ L+ k++ l+
  EPX74453.1 1541 KEELIGGLNQKINNLQ 1556
                  ************9986 PP

  == domain 15  score: -1.8 bits;  conditional E-value: 1.8
     UPF0242   77 lteldeglktkeealeelqeeeeeLkeeldakeeelerlkeenqqLqekleaiae...dfeelkleleeqLaekqellqeyqetieeqr 162 
                  l + +e+ +t++  le+ ++  ++L e+++  ++e +   ee   +++  e++ +     e+ + +++++L +k+   +++  +++ ++
  EPX74453.1 1559 LESSSEEANTHKSDLENKRSLVNKLTERIEIVTKEKQSVSEELTGIKMSYEKANNklsATEAELHFVQDNLSKKEDESKKLSSNLHTLK 1647
                  44444555555555555555555555555555555555555555555555554443323333344445555555555555544444444 PP

  == domain 16  score: 9.5 bits;  conditional E-value: 0.00059
     UPF0242   51 lllllkwekalkeklekskleekeaklteldeglktkeealeelqeeeeeLkeeldakeeelerlkeenqqLqekleaiaedfeelkleleeqLaek 147 
                  ++l++ +e +l++   ++++++  a + +l++ +++++e+le + +e++   ++ld+ ++++ +  e++  L  ++++i e  +++k ++e++La+ 
  EPX74453.1 1654 MVLIKGYEVDLQN--SANTINHHLATIGSLEKVISENKEKLEASSKETNAAIQQLDSEKRKILKDLEQKRLLITEKNEIIESLQKFKNNSEDKLAKL 1748
                  5667777666666..789999999************************************************************************* PP

     UPF0242  148 qellqeyqetieeqrsvlekrqdqieqLe 176 
                  +e l++++++ ee  + l+  + + ++L+
  EPX74453.1 1749 EEELHTLKNSSEEYVQKLQDAECKANNLQ 1777
                  *********99999888887776666665 PP

>> Laminin_II  Laminin Domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   1.5     0.055        89      14      69 ..     181     236 ..     171     242 .. 0.80
   2 ?    2.9  11.0     0.064   1.1e+02      10     101 ..     219     310 ..     211     314 .. 0.91
   3 ?    1.8   6.4      0.13   2.2e+02       5      91 ..     317     400 ..     311     406 .. 0.73
   4 ?    4.4   8.3     0.022        36      13      89 ..     399     476 ..     392     485 .. 0.82
   5 ?    0.3   6.3      0.41   6.7e+02       9      94 ..     458     540 ..     452     555 .. 0.45
   6 ?   -1.1   9.5         1   1.7e+03      16      97 ..     535     624 ..     513     628 .. 0.70
   7 !   17.6   7.0   1.8e-06    0.0029       6     100 ..     634     728 ..     630     730 .. 0.93
   8 ?    2.4   0.1     0.092   1.5e+02       7      80 ..     753     826 ..     747     837 .. 0.83
   9 ?   -0.0   3.0       0.5   8.1e+02      12      74 ..     835     897 ..     828     909 .. 0.80
  10 ?    2.9   2.2     0.064     1e+02      15      96 ..     901     980 ..     895     990 .. 0.87
  11 ?   -0.3   7.6      0.61     1e+03       6      71 ..    1001    1066 ..     990    1082 .. 0.46
  12 ?   -0.8  10.9      0.88   1.4e+03      11      84 ..    1027    1100 ..    1014    1109 .. 0.83
  13 ?    3.7   8.6     0.036        58      13      89 ..    1085    1165 ..    1073    1168 .. 0.57
  14 ?    2.1  13.2      0.11   1.8e+02       9      86 ..    1158    1239 ..    1151    1250 .. 0.67
  15 ?    0.4   9.6      0.37     6e+02      17      84 ..    1229    1293 ..    1222    1305 .. 0.60
  16 ?   -2.4  16.4       2.7   4.4e+03       4      82 ..    1258    1347 ..    1255    1355 .. 0.65
  17 ?    4.7   7.0     0.017        28      10      88 ..    1334    1412 ..    1327    1418 .. 0.87
  18 ?    0.0   0.7      0.49   7.9e+02      20      46 ..    1479    1505 ..    1455    1534 .. 0.44
  19 ?    2.7   8.2     0.071   1.2e+02       7      96 ..    1516    1605 ..    1510    1607 .. 0.64
  20 ?    2.1   7.6      0.11   1.8e+02       5      91 ..    1608    1688 ..    1605    1705 .. 0.85
  21 ?   -0.9   7.6      0.97   1.6e+03      16      93 ..    1686    1753 ..    1662    1760 .. 0.50
  22 ?   -0.6  10.8      0.77   1.3e+03       3      88 ..    1722    1804 ..    1719    1816 .. 0.75
  23 ?   -0.6   7.6      0.75   1.2e+03      17      84 ..    1816    1883 ..    1795    1909 .. 0.58

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.055
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTT CS
  Laminin_II  14 evleqlaplsqnlentkeklseinrsveetnekvkdankairdArrsvkkLeklap 69 
                   ++++ +l+  l+  ++++ e+ r++ ++++ ++++ k  + + + vk ++ +++
  EPX74453.1 181 YFQKKVSELESALSSKQSEAYELSRQLLNVTQRLDQKEKEYETVIQDVKSMKDKMN 236
                 56788888888888889999999999988888888888888888888888877665 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.064
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTTTTGGGHHHHHHHHHH...HHHHHHHHHHHHHH CS
  Laminin_II  10 etakevleqlaplsqnlentkeklseinrsveetnekvkdankairdArrsvkkLeklapqLldklkelkqleeassslsdniseikelIaq 101
                 +  + v ++++ ++ ++++ + + s ++++ e+ + ++ ++n++i + r+   +L  +  ++++kl+ l++ ++++  ++d  +++++l +q
  EPX74453.1 219 KEYETVIQDVKSMKDKMNHDQVSNSDLRAEQERLQRLLVSSNNTIGSLRQTETTLRSQCKDVEKKLSALNESNSNKDEIKDYQEKLQALTNQ 310
                 5667899***********************99*******************************************99999988888888776 PP

  == domain 3  score: 1.8 bits;  conditional E-value: 0.13
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTTTTGGGHHHHHHHHHH...HHHH CS
  Laminin_II   5 aaeanetakevleqlaplsqnlentkeklseinrsveetnekvkdankairdArrsvkkLeklapqLldklkelkqleeassslsdn 91 
                 + ea+ + ++ le + + +++l + + kl++i rs     + +kd+++ i + ++++ +Le    +L  kl++l+  + +  s+++ 
  EPX74453.1 317 MIEALRKDTQSLENTSADNAELIEKNRKLEKILRS---SIASLKDSKEEITSMQNKINELEGRSSDLQYKLNTLEDESGEFDSVKHH 400
                 55566666666666666666666777777777666...6778889999999999999999999999999999999887776666655 PP

  == domain 4  score: 4.4 bits;  conditional E-value: 0.022
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTTTTGGGHHHHHHHHHH....HH CS
  Laminin_II  13 kevleqlaplsqnlentkeklseinrsveetnekvkdankairdArrsvkkLeklapqLldklkelkqleeasss.ls 89 
                  + ++ l++ + +l++  e+l++ n++++e ++ + + nk ++++ ++      ++ +L +k+ el++l   ss  l 
  EPX74453.1 399 HHLQATLEESNYKLSEKTESLNHSNQQLQELEARITETNKHLVLVTSERDRNSSEVKDLHEKITELQNLVTSSSKsLE 476
                 566778888889999999999************************9999999999*******9999999877443343 PP

  == domain 5  score: 0.3 bits;  conditional E-value: 0.41
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTTTTGGGHHHHHHHHHH...HHHHHHH CS
  Laminin_II   9 netakevleqlaplsqnlentkeklseinrsveetnekvkdankairdArrsvkkLeklapqLldklkelkqleeassslsdnise 94 
                  e+++e ++ ++  s+ le  ++ + + +++  + + +++++ + + + +++++  ++ ++ L d+   +k+ e++ + l  +++e
  EPX74453.1 458 HEKITELQNLVTSSSKSLEDSQSIIAQKENEYSKLTSLLEEKERLLFESKNESVSKNQYVETLKDQ---VKKYEDNIEDLTSELNE 540
                 444444444444444444444444444444444444444444444444444444444444444444...33333333334444444 PP

  == domain 6  score: -1.1 bits;  conditional E-value: 1
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTTTTGGGHHHHHHHHHH...........HHHHHHHHHH CS
  Laminin_II  16 leqlaplsqnlentkeklseinrsveetnekvkdankairdArrsvkkLeklapqLldklkelkqleeasss........lsdniseike 97 
                  + l++  + + ++ ++++++ +s +e  ++ ++a+ka++d+++  k  +  + +    l+++++l e+s++        l++++s+ik 
  EPX74453.1 535 TSELNERRNVIAKLGDEYKSLSASRNEELAEKEQAQKALADVQDLCKAFQDRLKDSTLSLRNMEKLLEESQNsngeevhtLKAELSRIKS 624
                 3333333444555556666666665555555569999999999999999999999999999999999888888899999999****9996 PP

  == domain 7  score: 17.6 bits;  conditional E-value: 1.8e-06
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTTTTGGGHHHHHHHHHH...HHHHHHHHHHHHH CS
  Laminin_II   6 aeanetakevleqlaplsqnlentkeklseinrsveetnekvkdankairdArrsvkkLeklapqLldklkelkqleeassslsdniseikelIa 100
                  ++ne++ +  ++ ++l++n e+ + ++ ++n+s +e ++k +d++++ ++ ++++k+L   + +L +   +l++lee++  lsd+++  k +++
  EPX74453.1 634 YKVNEQIMSLNKDFNDLQANNEEQSRSYDSLNASFAELQKKFNDSQEMNNSMESEIKTLRDSLSKLDETEDSLRKLEEHNRDLSDQLNVYKDQVE 728
                 578999999*******************************************************999999999999999888****998888876 PP

  == domain 8  score: 2.4 bits;  conditional E-value: 0.092
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTTTTGGGHHHHHH CS
  Laminin_II   7 eanetakevleqlaplsqnlentkeklseinrsveetnekvkdankairdArrsvkkLeklapqLldklkelkq 80 
                 + + +    ++ ++ l+   e +++k s++ +s e++  ++++ +k+ ++   +   L++ +  L +  kel  
  EPX74453.1 753 SCQRSYDDSQSEVTYLKSMNESLEAKHSTFSSSFEKISTELQSVMKVKDETFGECCRLKQCLTSLTEEYKELSS 826
                 5556666677888888888899999***********************99999999999999999998888765 PP

  == domain 9  score: -0.0 bits;  conditional E-value: 0.5
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTTTTGGG CS
  Laminin_II  12 akevleqlaplsqnlentkeklseinrsveetnekvkdankairdArrsvkkLeklapqLldk 74 
                  ++ +e  ++l +n +++ e++ ++++s++++   +++++ ++++  ++ k L+ ++ +L + 
  EPX74453.1 835 YQNSEESNNNLRVNSSKLTEEIGHLKSSLQNVVSSLSSSKVVMNSLTDANKRLQDELAVLRSN 897
                 567788889999999999999999999999999999999988888888888888888777665 PP

  == domain 10  score: 2.9 bits;  conditional E-value: 0.064
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTTTTGGGHHHHHHHHHH....HHHHHHHHH CS
  Laminin_II  15 vleqlaplsqnlentkeklseinrsveetnekvkdankairdArrsvkkLeklapqLldklkelkqleeasss.lsdniseik 96 
                 v +ql+   ++l + ++ ++++ +s+ et++++++ n + +    ++  Le++ + L++  + l+q+    +  ++d+i+++ 
  EPX74453.1 901 VTKQLNSDREKLFKASDLYESLLQSATETEKNLRSENDGYA---GKICALEQEKEGLFKEKEDLNQKALSLADeVKDKIEKLS 980
                 677788888899999999*******9****99999998874...7999**********999******9998878999999875 PP

  == domain 11  score: -0.3 bits;  conditional E-value: 0.61
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTTTT CS
  Laminin_II    6 aeanetakevleqlaplsqnlentkeklseinrsveetnekvkdankairdArrsvkkLeklapqL 71  
                  +e +++++++ e++++l+++ + t ++++++ +s e+++e+++ +n  +++ +rs  +   + ++L
  EPX74453.1 1001 SEKSKILSQTMEIVKQLEEEKSTTGKEIKHLMSSKENIEEELRTLNSSLASLQRSLEDQIAEKENL 1066
                  344444444444444444444444444444444444444444444444444444444333333333 PP

  == domain 12  score: -0.8 bits;  conditional E-value: 0.88
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTT.TTGGGHHHHHHHHHH CS
  Laminin_II   11 takevleqlaplsqnlentkeklseinrsveetnekvkdankairdArrsvkkLeklap.qLldklkelkqleea 84  
                   +k+  + +++++++l  ++++l +++rs+e   ++ +++++ ++  ++s++ Lek  + +Ll+k ++l++ ++ 
  EPX74453.1 1027 EIKHLMSSKENIEEELRTLNSSLASLQRSLEDQIAEKENLSEKLVKSQDSISALEKDQEsVLLEK-NNLQKSKVD 1100
                  5677888999*********************999999******************9877256677.777666655 PP

  == domain 13  score: 3.7 bits;  conditional E-value: 0.036
                  XXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTTTTGGGHHHHHHHHHH....HH CS
  Laminin_II   13 kevleqlaplsq...nlentkeklseinrsveetnekvkdankairdArrsvkkLeklapqLldklkelkqleeasss.ls 89  
                  ++vl  +++l++   +le+  e++++  +s+ e +  ++d  + ++dA ++ k+L++++ + +++ + l ++ +++++ + 
  EPX74453.1 1085 ESVLLEKNNLQKskvDLEQALESVERSYASLSEEHRSIRDEYQSLEDAFSKLKELNQKLIEKISQSEDLSKQLKEKNAaVD 1165
                  556666666655111444444444444455555677777888888888888888887766666666777555444443355 PP

  == domain 14  score: 2.1 bits;  conditional E-value: 0.11
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TT....TTTGGGHHHHHHHHHH.. CS
  Laminin_II    9 netakevleqlaplsqnlentkeklseinrsveetnekvkdankairdArrsvkkLekla....pqLldklkelkqleeass 86  
                  +e+ ++v ++l +  ++l+ t++ l +  ++   ++ + + +n+++ +A++s+kkLe++     ++Lld +k+lk  e   +
  EPX74453.1 1158 KEKNAAVDDKLLDTTKQLKDTEAMLAQKSQEFSDVQSEKNLLNQQLYEAENSSKKLEEKNtamdNKLLDAMKQLKDTEAMLA 1239
                  455566666666666666666666666666666666668899***************9862233566666666666665543 PP

  == domain 15  score: 0.4 bits;  conditional E-value: 0.37
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TT....TTTGGGHHHHHHHHHH CS
  Laminin_II   17 eqlaplsqnlentkeklseinrsveetnekvkdankairdArrsvkkLekla....pqLldklkelkqleea 84  
                  +ql++ ++ l + +++ s ++++        + +n+++ +A++s+kkLe++     ++Lld +k+lk  e  
  EPX74453.1 1229 KQLKDTEAMLAQKSQEFSDVQSE-------KDLLNQQLSEAENSSKKLEEKNtamdNKLLDAMKQLKDTEAM 1293
                  45555555555555555555555.......446788999999999999987622335566666666655544 PP

  == domain 16  score: -2.4 bits;  conditional E-value: 2.7
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.......XXXXXXXXXXXXXXXX--TT....TTTGGGHHHHHHHH CS
  Laminin_II    4 laaeanetakevleqlaplsqnlentkeklseinrsveetnekvk.......dankairdArrsvkkLekla....pqLldklkelkqle 82  
                   ++ea+++ k+ +e+ ++++++l    ++l+  ++ +++  ++ +        +n+++ +A++s+kkLe++     ++Lld +k+lk  e
  EPX74453.1 1258 QLSEAENSSKKLEEKNTAMDNKLLDAMKQLKDTEAMLAQKSQEFSdvqseknLLNQQLSEAENSSKKLEEKNtamdNKLLDAMKQLKDTE 1347
                  57788888888888888888888777777776665555544443322223325789999*********9986223356666666666555 PP

  == domain 17  score: 4.7 bits;  conditional E-value: 0.017
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTTTTGGGHHHHHHHHHH...H CS
  Laminin_II   10 etakevleqlaplsqnlentkeklseinrsveetnekvkdankairdArrsvkkLeklapqLldklkelkqleeasssl 88  
                  +++    +ql++ ++ l + +++ s ++++ +  n++ ++a + i +  +s+ + e+   +L +k+ ++ + +e+ +sl
  EPX74453.1 1334 NKLLDAMKQLKDTETMLAQKSQEFSYVQSEKDLLNQQFSEAEENISSLHQSIAQFENDKKELSAKIDSIGKENEELNSL 1412
                  5556667899999999999999999999999999999999999999999999999999999999999999999888775 PP

  == domain 18  score: 0.0 bits;  conditional E-value: 0.49
                  XXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Laminin_II   20 aplsqnlentkeklseinrsveetnek 46  
                    ls++l n++++l+++ +    t+++
  EPX74453.1 1479 DTLSNELRNVRSDLNSLSQLFSDTKKD 1505
                  233333333333333333332222222 PP

  == domain 19  score: 2.7 bits;  conditional E-value: 0.071
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--T...TTTTGGGHHHHHHHHHH...HHHHHHHHH CS
  Laminin_II    7 eanetakevleqlaplsqnlentkeklseinrsveetnekvkdankairdArrsvkkLekl...apqLldklkelkqleeassslsdniseik 96  
                  + n+   ev +  + ++ n ++++ k + i +  +++n++ +d+    ++A++  ++Le++   +++L ++++ + + +   +s+s+++  ik
  EPX74453.1 1516 QLNDLNLEVDSFSKSIESNSSELQRKEELIGGLNQKINNLQRDLESSSEEANTHKSDLENKrslVNKLTERIEIVTKEK---QSVSEELTGIK 1605
                  5556666666667777766666666666555555567777777777777788888888765222666777765555544...45999999998 PP

  == domain 20  score: 2.1 bits;  conditional E-value: 0.11
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTTTTGGGHHHHHHHHHH...HHHH CS
  Laminin_II    5 aaeanetakevleqlaplsqnlentkeklseinrsveetnekvkdankairdArrsvkkLeklapqLldklkelkqleeassslsdn 91  
                   ++an++++++++ l+ ++ nl++ +++ +++ ++    + + k+  + +++ +   ++L++ a+ +   l ++  le+    +s+n
  EPX74453.1 1608 YEKANNKLSATEAELHFVQDNLSKKEDESKKLSSN---LHTLKKKTDEHMVLIKGYEVDLQNSANTINHHLATIGSLEKV---ISEN 1688
                  578********************************...5555556777788889999999999*9999999999999887...6655 PP

  == domain 21  score: -0.9 bits;  conditional E-value: 0.97
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTTTTGGGHHHHHHHHHH...HHHHHH CS
  Laminin_II   16 leqlaplsqnlentkeklseinrsveetnekvkdankairdArrsvkkLeklapqLldklkelkqleeassslsdnis 93  
                   e +++l++  ++t++ +++++++ +++ ++++++   i + ++ +  L+k  ++ +dkl +l++          ++ 
  EPX74453.1 1686 SENKEKLEASSKETNAAIQQLDSEKRKILKDLEQKRLLITEKNEIIESLQKFKNNSEDKLAKLEE----------ELH 1753
                  33444444444455555555555555555555544444444444444444444444444444444..........333 PP

  == domain 22  score: -0.6 bits;  conditional E-value: 0.77
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTTTTGGGHHHHHHHHHH...H CS
  Laminin_II    3 elaaeanetakevleqlaplsqnlentkeklseinrsveetnekvkdankairdArrsvkkLeklapqLldklkelkqleeasssl 88  
                   l++e ne++++ ++ +++ + +l +++e+l+++++s    +e v++++ a   A++    L++  ++L  k ++ k+l++ ++sl
  EPX74453.1 1722 LLITEKNEIIESLQKFKNNSEDKLAKLEEELHTLKNS---SEEYVQKLQDAECKANNLQNLLNRSNEELSVKDQQCKELQSTQQSL 1804
                  5688999999999999999999999999999999999...5556666666667777777777777777877777888888877774 PP

  == domain 23  score: -0.6 bits;  conditional E-value: 0.75
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTTTTGGGHHHHHHHHHH CS
  Laminin_II   17 eqlaplsqnlentkeklseinrsveetnekvkdankairdArrsvkkLeklapqLldklkelkqleea 84  
                  + l  l+  l  t++   e++++v++  e +k      +   ++vkkL +++ q  d + e +q++  
  EPX74453.1 1816 STLSSLEDVLTGTQAHNTELEGEVKRSMERIKRRDDRCDHLASKVKKLHQQLSQQHDTFFEAEQKRIL 1883
                  44455556666667777777777777777777777777777777777777777776666666666543 PP

>> CENP-F_leu_zip  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   1.6      0.29   4.8e+02      79     106 ..     158     196 ..     121     204 .. 0.56
   2 ?    3.8  20.4     0.032        53      22     137 ..     182     306 ..     173     311 .. 0.71
   3 !    6.9  25.0    0.0037       6.1       7     127 ..     282     401 ..     278     420 .. 0.80
   4 ?    3.4  17.5     0.044        71      40     133 ..     405     498 ..     398     505 .. 0.83
   5 ?   -2.1  13.9       2.2   3.6e+03      26     123 ..     545     639 ..     542     657 .. 0.79
   6 ?    1.6  15.3      0.16   2.6e+02      20     140 .]     585     701 ..     580     701 .. 0.69
   7 ?    1.2  14.1      0.21   3.5e+02      19     122 ..     633     731 ..     620     742 .. 0.65
   8 ?    4.0   8.8     0.028        46      36     136 ..     747     850 ..     739     873 .. 0.47
   9 ?   -1.6  24.5       1.6   2.6e+03       6     136 ..     864    1005 ..     860    1023 .. 0.80
  10 !    7.8  17.5     0.002       3.2      43     106 ..    1017    1087 ..    1009    1096 .. 0.69
  11 ?    1.7  17.9      0.15   2.4e+02      19     124 ..    1091    1189 ..    1089    1195 .. 0.75
  12 ?    2.9   8.0     0.064     1e+02      60     110 ..    1174    1224 ..    1167    1229 .. 0.86
  13 ?   -2.7  20.9       3.4   5.6e+03      32     111 ..    1205    1281 ..    1193    1291 .. 0.68
  14 ?    2.8   9.5     0.068   1.1e+02      61     110 ..    1287    1336 ..    1280    1342 .. 0.84
  15 !    8.2   6.2    0.0015       2.4      61     112 ..    1343    1394 ..    1337    1415 .. 0.77
  16 !    7.1   4.4    0.0033       5.3      60     130 ..    1456    1526 ..    1441    1535 .. 0.85
  17 !   17.1  12.7   2.5e-06    0.0041       9      90 ..    1535    1616 ..    1528    1622 .. 0.89
  18 ?   -1.4  22.6       1.3   2.2e+03       3     125 ..    1592    1729 ..    1591    1738 .. 0.90
  19 ?   -3.6  24.9       6.3     1e+04      12     131 ..    1643    1766 ..    1632    1767 .. 0.58
  20 ?   -2.1  17.9       2.3   3.7e+03      52     136 ..    1729    1812 ..    1724    1819 .. 0.79
  21 ?   -1.7  11.8       1.7   2.7e+03       6     103 ..    1840    1943 ..    1836    1952 .. 0.80
  22 ?    1.2   0.1      0.21   3.4e+02      36      76 ..    1987    2027 ..    1984    2037 .. 0.88

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.29
  CENP-F_leu_zip  79 r.........sekeeLek..elqkkqervseLeslnssl 106
                     +         s+ + L+   + q  q++vseLes+ ss 
      EPX74453.1 158 SnregweknpSDMDALTSseDYQYFQKKVSELESALSSK 196
                     244444444466666654115677899999999888775 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.032
  CENP-F_leu_zip  22 LkdkvenLerelemsee.......nqekvileaEtskaevetlkeeieelaeelreleldLvalrsekeeLekelqkkqervseLeslnsslenl 109
                     ++ kv +Le+ l   ++       ++ +v+   +++ +e et+ + ++ ++ ++++ ++  ++lr e+e L++ l  +++++ +L +++ +l+++
      EPX74453.1 182 FQKKVSELESALSSKQSeayelsrQLLNVTQRLDQKEKEYETVIQDVKSMKDKMNHDQVSNSDLRAEQERLQRLLVSSNNTIGSLRQTETTLRSQ 276
                     455555555555554440000000455555667888899******************************************************** PP

  CENP-F_leu_zip 110 leekEqe..kvqmkeeskaaveeLqtqlke 137
                      ++ E++    +++++ k +++  q  l+ 
      EPX74453.1 277 CKDVEKKlsALNESNSNKDEIKDYQEKLQA 306
                     *****9966333334444455554444444 PP

  == domain 3  score: 6.9 bits;  conditional E-value: 0.0037
  CENP-F_leu_zip   7 hvlekLKeserkadsLkdkvenLerelemseenqekvileaEtskaevetlkeeieelaeelreleldLvalrsekeeLekelqkkqervseLes 101
                     + l+ L es++++d +kd  e+L++ l ++ +++e++i    +  + +e+  +   el e+ r+le  L +     ++ ++e+  +q++++eLe 
      EPX74453.1 282 KKLSALNESNSNKDEIKDYQEKLQA-LTNQLKKKEHMIEALRKDTQSLENTSADNAELIEKNRKLEKILRSSIASLKDSKEEITSMQNKINELEG 375
                     5577899****************87.66777788******************999999999999998887655555555778899********** PP

  CENP-F_leu_zip 102 lnsslenlleekEqekvqmkeeskaa 127
                     + s+l+  l+ +E+e  +     ++ 
      EPX74453.1 376 RSSDLQYKLNTLEDESGEFDSVKHHL 401
                     **************965544433333 PP

  == domain 4  score: 3.4 bits;  conditional E-value: 0.044
  CENP-F_leu_zip  40 qekvileaEtskaevetlkeeieelaeelreleldLvalrsekeeLekelqkkqervseLeslnsslenlleekEqekvqmkeeskaaveeLqt 133
                     +e+      ++ + ++  +++++el+++ +e +  Lv ++se++    e+++  e++ eL++l  s ++ le++    +q ++e+ +  ++L+ 
      EPX74453.1 405 LEESNYKLSEKTESLNHSNQQLQELEARITETNKHLVLVTSERDRNSSEVKDLHEKITELQNLVTSSSKSLEDSQSIIAQKENEYSKLTSLLEE 498
                     55555555556667777899****************************************************9998888888888777776665 PP

  == domain 5  score: -2.1 bits;  conditional E-value: 2.2
  CENP-F_leu_zip  26 venLerelemseenqekvileaEtskaevetlkeeieelaeelreleldLvalrsekeeLekelqkkqervseLeslnsslenlleekEqekvqm 120
                     + +L  e + + +++++   e+E++++++  +++  +  + +l++ +l L ++    + Le++ + + e+v++L++  s +++ l ek     ++
      EPX74453.1 545 IAKLGDEYKSLSASRNEELAEKEQAQKALADVQDLCKAFQDRLKDSTLSLRNME---KLLEESQNSNGEEVHTLKAELSRIKSSLDEKDSYVYKV 636
                     677888889999999999999999999999999999999999999999998874...34555555666899999999999999999998886666 PP

  CENP-F_leu_zip 121 kee 123
                     +e+
      EPX74453.1 637 NEQ 639
                     665 PP

  == domain 6  score: 1.6 bits;  conditional E-value: 0.16
  CENP-F_leu_zip  20 dsLkdkvenLerelemseenqekvileaEtskaevetlkeeieelaeelreleldLvalrsekeeLekelqkkqervseLeslnsslenlleekE 114
                     d Lkd  ++L    + +ee+q++   e+ t kae++ +k+ ++e  +   + + ++ +l ++ ++L+ + +++     + +sln s+ + l++k 
      EPX74453.1 585 DRLKDSTLSLRNMEKLLEESQNSNGEEVHTLKAELSRIKSSLDEKDSYVYKVNEQIMSLNKDFNDLQANNEEQS---RSYDSLNASFAE-LQKKF 675
                     77777777777777777777777777777777777777777777777777777777777777777744433333...356677777765.57777 PP

  CENP-F_leu_zip 115 qekvqmkeeskaaveeLqtqlkelne 140
                     ++  +m+++++++++ L+  l +l+e
      EPX74453.1 676 NDSQEMNNSMESEIKTLRDSLSKLDE 701
                     88888888888888888888877765 PP

  == domain 7  score: 1.2 bits;  conditional E-value: 0.21
  CENP-F_leu_zip  19 adsLkdkvenLerelemseenqekvileaEtskaevetlkeeieelaeelreleldLvalrsekeeLekelqkkqervseLeslnsslenlleek 113
                       ++++++ +L+++ +++++n+e+  +  ++  a   +l+++ +  +e  + +e+++++lr     L  +l +  +    Le+ n +l+ +l+  
      EPX74453.1 633 VYKVNEQIMSLNKDFNDLQANNEEQSRSYDSLNASFAELQKKFNDSQEMNNSMESEIKTLRDS---L-SKLDETEDSLRKLEEHNRDLSDQLNVY 723
                     445778888888888889988888888888888888888888888888888888888888743...3.334555555555666666655555432 PP

  CENP-F_leu_zip 114 Eqekvqmke 122
                      +++v++ke
      EPX74453.1 724 -KDQVEEKE 731
                     .33333333 PP

  == domain 8  score: 4.0 bits;  conditional E-value: 0.028
  CENP-F_leu_zip  36 seenqekvileaEtskaevetlkeeieelaeelreleldLvalrsekeeLekelqkkqervseLeslnsslenlleekEqe...kvqmkeeskaa 127
                     +e+++++  +  ++s+ ev  lk++ e l+++ + +++ +++++ e ++++k   +   +   L+++  sl++  +e+  +    +q +++s+++
      EPX74453.1 747 LESKLDSCQRSYDDSQSEVTYLKSMNESLEAKHSTFSSSFEKISTELQSVMKVKDETFGECCRLKQCLTSLTEEYKELSSDysgLKQAYQNSEES 841
                     34444444444444444444444444444444444444444444444444444444444444444444444444444444433333333333333 PP

  CENP-F_leu_zip 128 veeLqtqlk 136
                      + L+++  
      EPX74453.1 842 NNNLRVNSS 850
                     333333333 PP

  == domain 9  score: -1.6 bits;  conditional E-value: 1.6
  CENP-F_leu_zip    6 lhvlekLKeserkadsLkdkvenLerelemseenqekvileaEtskaevetlkeeieelaeelreleldLvalr...........sekeeLek 87  
                      ++v + L  s+   +sL d  ++L+ el  + +n e v+ +  + ++++ +  +  e l ++ +e e +L +             +eke L k
      EPX74453.1  864 QNVVSSLSSSKVVMNSLTDANKRLQDELAVLRSNHEGVTKQLNSDREKLFKASDLYESLLQSATETEKNLRSENdgyagkicaleQEKEGLFK 956 
                      567788889999999************************************777777777777777777766666666666666688888888 PP

  CENP-F_leu_zip   88 elqkkqervseLeslnsslenlleekEqekvqmkeeskaaveeLqtqlk 136 
                      e ++ +++  +L     +  + l+++E  +   +ee k+a +eL+   k
      EPX74453.1  957 EKEDLNQKALSLADEVKDKIEKLSNLEVLHSSREEEFKNARDELSEKSK 1005
                      8888888888888888888888888888888888888888888877665 PP

  == domain 10  score: 7.8 bits;  conditional E-value: 0.002
  CENP-F_leu_zip   43 vileaEtskaevetlkeeieelaeelreleldLvalr.......sekeeLekelqkkqervseLeslnssl 106 
                      ++ e+ t  +e++ l + +e+++eelr l++ L++l+        eke+L ++l k+q+ +s Le+ ++s+
      EPX74453.1 1017 LEEEKSTTGKEIKHLMSSKENIEEELRTLNSSLASLQrsledqiAEKENLSEKLVKSQDSISALEKDQESV 1087
                      233333444556666666666666666666666666656666669********************988775 PP

  == domain 11  score: 1.7 bits;  conditional E-value: 0.15
  CENP-F_leu_zip   19 adsLkdkvenLerelemseenqekvileaEtskaevetlkeeieelaeelreleldLvalrsekeeLekelqkkqervseLeslnsslenlle 111 
                      +++L+     Le+ le +e++  ++  e  + + e ++l++   +    l+el+++L +  s+ e+L k+l++k+  v++     ++++++l+
      EPX74453.1 1091 KNNLQKSKVDLEQALESVERSYASLSEEHRSIRDEYQSLEDAFSK----LKELNQKLIEKISQSEDLSKQLKEKNAAVDD---KLLDTTKQLK 1176
                      566666666777777777777777777777777777777777765....778888888888999***********99976...6778888888 PP

  CENP-F_leu_zip  112 ekEqekvqmkees 124 
                      + E+  +q ++e 
      EPX74453.1 1177 DTEAMLAQKSQEF 1189
                      8888777666664 PP

  == domain 12  score: 2.9 bits;  conditional E-value: 0.064
  CENP-F_leu_zip   60 eieelaeelreleldLvalrsekeeLekelqkkqervseLeslnsslenll 110 
                      +++  ++ l + ++++++++sek+ L+++l +  +  + Le+ n  + n l
      EPX74453.1 1174 QLKDTEAMLAQKSQEFSDVQSEKNLLNQQLYEAENSSKKLEEKNTAMDNKL 1224
                      444456778888999******************************999977 PP

  == domain 13  score: -2.7 bits;  conditional E-value: 3.4
  CENP-F_leu_zip   32 elemseenqekvileaEtsk.aevetlkeeieelaeelreleldLvalrsekeeLekelqkkqervseLeslnsslenlle 111 
                      e e+s +++e+  + ++++   ++++lk+     ++ l + ++++++++sek+ L+++l +  +  + Le+ n  + n l 
      EPX74453.1 1205 EAENSSKKLEEKNTAMDNKLlDAMKQLKDT----EAMLAQKSQEFSDVQSEKDLLNQQLSEAENSSKKLEEKNTAMDNKLL 1281
                      344444555555555544431223333333....5556667788999**************************99999875 PP

  == domain 14  score: 2.8 bits;  conditional E-value: 0.068
  CENP-F_leu_zip   61 ieelaeelreleldLvalrsekeeLekelqkkqervseLeslnsslenll 110 
                      ++  ++ l + ++++++++sek+ L+++l +  +  + Le+ n  + n l
      EPX74453.1 1287 LKDTEAMLAQKSQEFSDVQSEKNLLNQQLSEAENSSKKLEEKNTAMDNKL 1336
                      333466788889999*****************************999987 PP

  == domain 15  score: 8.2 bits;  conditional E-value: 0.0015
  CENP-F_leu_zip   61 ieelaeelreleldLvalrsekeeLekelqkkqervseLeslnsslenllee 112 
                      ++  ++ l + +++++ ++sek+ L+++  +  e +s+L ++  ++en  +e
      EPX74453.1 1343 LKDTETMLAQKSQEFSYVQSEKDLLNQQFSEAEENISSLHQSIAQFENDKKE 1394
                      33446778888899999***********************999999986554 PP

  == domain 16  score: 7.1 bits;  conditional E-value: 0.0033
  CENP-F_leu_zip   60 eieelaeelreleldLvalrsekeeLekelqkkqervseLeslnsslenlleekEqekvqmkeeskaavee 130 
                        +el+++lr+ e++L++  ++ ++L +el++ ++  ++L +l s++++     E++ +   ++ + +v++
      EPX74453.1 1456 CFKELTNKLRNKETELQDRIQDADTLSNELRNVRSDLNSLSQLFSDTKKDYASREHDLITQLNDLNLEVDS 1526
                      5689*********************************************9999999977666666666555 PP

  == domain 17  score: 17.1 bits;  conditional E-value: 2.5e-06
  CENP-F_leu_zip    9 lekLKeserkadsLkdkvenLerelemseenqekvileaEtskaevetlkeeieelaeelreleldLvalrsekeeLekelq 90  
                       ++L++ e+    L++k++nL+r+le s e+ +  + + E+++  v++l e ie  ++e +  + +L+ ++   e+ +++l 
      EPX74453.1 1535 SSELQRKEELIGGLNQKINNLQRDLESSSEEANTHKSDLENKRSLVNKLTERIEIVTKEKQSVSEELTGIKMSYEKANNKLS 1616
                      5678888888889*******************************************************99988777777765 PP

  == domain 18  score: -1.4 bits;  conditional E-value: 1.3
  CENP-F_leu_zip    3 kkklhvlekLKeserkadsLkdkvenLerelemseenqekvileaEtskaevetlkeeieelaeelreleldLvalr................ 79  
                      k+k++v e+L  ++ + ++ ++k  + e+el  ++ n++k + e  +    + tlk++ +e     +  e+dL++                  
      EPX74453.1 1592 KEKQSVSEELTGIKMSYEKANNKLSATEAELHFVQDNLSKKEDESKKLSSNLHTLKKKTDEHMVLIKGYEVDLQNSAntinhhlatigslekv 1684
                      8999**********************************************************************9999999************ PP

  CENP-F_leu_zip   80 ..sekeeLekelqkkqervseLeslnsslenlleekEqekvqmkeesk 125 
                        ++ke+Le + ++ +  +++L+s +   +++l+++Eq++  + e+ +
      EPX74453.1 1685 isENKEKLEASSKETNAAIQQLDSEK---RKILKDLEQKRLLITEKNE 1729
                      *999****************999766...6778888888777766654 PP

  == domain 19  score: -3.6 bits;  conditional E-value: 6.3
  CENP-F_leu_zip   12 LKeserkadsLkdkvenLerelemseenqekvileaEtskaevetlkeeieelaeelreleldLvalrsekeeLekelqkkq.......ervs 97  
                      L   ++k d     +++ e +l++s +  ++      +  +    + e++e+l+++ +e ++ +++l sek ++ k+l++k+       e ++
      EPX74453.1 1643 LHTLKKKTDEHMVLIKGYEVDLQNSANTINHHLATIGSLEKV---ISENKEKLEASSKETNAAIQQLDSEKRKILKDLEQKRlliteknEIIE 1732
                      555555555555555555555555555544444444444333...3466777888999999*****************998711111114445 PP

  CENP-F_leu_zip   98 eLeslnsslenlleekEqekvqmkeeskaaveeL 131 
                      +L++ +   e  l ++E+e   +k++s++ v++L
      EPX74453.1 1733 SLQKFKNNSEDKLAKLEEELHTLKNSSEEYVQKL 1766
                      5555555555555555555555555555555555 PP

  == domain 20  score: -2.1 bits;  conditional E-value: 2.3
  CENP-F_leu_zip   52 aevetlkeeieelaeelreleldLvalrsekeeLekelqkkqervseLeslnsslenlleekEqekvqmkeeskaaveeLqtqlk 136 
                      + +e+l++ +++ + +l +le +L +l++  ee  ++lq+   + ++L++l    ++ l+ k q+  ++ +++++++   q++lk
      EPX74453.1 1729 EIIESLQKFKNNSEDKLAKLEEELHTLKNSSEEYVQKLQDAECKANNLQNLLNRSNEELSVKDQQ-CKELQSTQQSLTVVQNELK 1812
                      33678888899999999999999999999999999999999999999999999999999999876.4455566666666676666 PP

  == domain 21  score: -1.7 bits;  conditional E-value: 1.7
  CENP-F_leu_zip    6 lhvlekLKeserkadsLkdkvenLerelemse....enqekvileaEtskaevetlkeeieelaeelrel..eldLvalrsekeeLekelqkk 92  
                      ++  e+ K+   + d+L  kv++L ++l ++     e  +k il+  + k +v++  +++++l ++  el  ++ +       +++eke+   
      EPX74453.1 1840 KRSMERIKRRDDRCDHLASKVKKLHQQLSQQHdtffEAEQKRILQLTNLKDTVKKQDKHLKKLIQKQDELvpRSTILVYEAYIKDIEKEIIIL 1932
                      5678999*****************999987763333567788999999999999999999999999998844456666667788999999999 PP

  CENP-F_leu_zip   93 qervseLesln 103 
                      qer ++Le ++
      EPX74453.1 1933 QERLNSLELSQ 1943
                      99999988765 PP

  == domain 22  score: 1.2 bits;  conditional E-value: 0.21
  CENP-F_leu_zip   36 seenqekvileaEtskaevetlkeeieelaeelreleldLv 76  
                       +e++++ i++  + +a+     +++++lae l+ l+  L+
      EPX74453.1 1987 FQEDLDRCITDEKERQATYFDYTQKVDHLAECLQALQFALD 2027
                      588999999****************************9986 PP

>> Bacillus_HBL  Bacillus haemolytic enterotoxin (HBL)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   4.7   3.4e-06    0.0055      82     175 ..     177     278 ..     148     280 .. 0.84
   2 !    8.5  10.8     0.001       1.7      96     175 ..     293     371 ..     281     373 .. 0.88
   3 ?    0.7   1.1      0.24   3.9e+02     128     175 ..     380     427 ..     371     441 .. 0.59
   4 ?    1.1   5.5      0.19   3.1e+02     100     169 ..     447     526 ..     438     533 .. 0.69
   5 ?    0.6   1.4      0.26   4.2e+02     129     170 ..     514     555 ..     485     562 .. 0.71
   6 ?   -2.5   8.0       2.4   3.9e+03     115     174 ..     563     626 ..     506     641 .. 0.55
   7 ?    0.3   5.1      0.33   5.3e+02      96     172 ..     608     680 ..     594     692 .. 0.68
   8 ?    2.4   4.4     0.076   1.2e+02      65     155 ..     701     795 ..     679     822 .. 0.79
   9 ?    0.9   3.1      0.21   3.4e+02     103     174 ..     817     891 ..     781     893 .. 0.78
  10 ?    0.7   2.1      0.25   4.1e+02     100     156 ..     849     908 ..     826     928 .. 0.54
  11 !   13.6   4.7   2.7e-05     0.045      97     176 ..     948    1030 ..     938    1031 .. 0.90
  12 ?   -1.7   6.3       1.4   2.2e+03      99     156 ..    1034    1091 ..    1032    1115 .. 0.76
  13 ?   -3.7  10.2       5.4   8.8e+03     101     172 ..    1130    1201 ..    1112    1206 .. 0.69
  14 ?   -4.3   6.1       8.3   1.4e+04     108     170 ..    1211    1276 ..    1203    1283 .. 0.68
  15 ?   -3.3   9.4       4.3     7e+03     107     173 ..    1322    1391 ..    1308    1395 .. 0.86
  16 ?   -0.8   7.4      0.73   1.2e+03     105     172 ..    1490    1557 ..    1443    1569 .. 0.59
  17 ?   -2.2   8.8       1.9   3.1e+03     126     173 ..    1511    1558 ..    1470    1597 .. 0.55
  18 ?   -2.6   4.1       2.5   4.1e+03     108     151 ..    1581    1624 ..    1563    1650 .. 0.46
  19 ?    2.4   4.5     0.073   1.2e+02     105     175 ..    1620    1693 ..    1604    1695 .. 0.85
  20 ?   -2.5  10.0       2.4   3.9e+03      97     173 ..    1735    1810 ..    1719    1819 .. 0.60
  21 ?   -0.2   5.2      0.48   7.8e+02     105     175 ..    1774    1847 ..    1756    1849 .. 0.77
  22 ?   -2.8   5.5         3   4.8e+03     102     151 ..    1859    1908 ..    1850    1938 .. 0.66

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 3.4e-06
  Bacillus_HBL  82 tkFqsyyktlveav.....dkkdkaellellekLqeeiqqnqkevkqlikeLkklklklakds...knFktdvdeltsilagdsgvisqlqneiedl 170
                   + +q ++k+++e+      ++ +  el+ +l +  + + q++ke +++i+++k++k+k+++d+   +++ ++ + l+  l +++ +i  l+++ ++l
    EPX74453.1 177 EDYQYFQKKVSELEsalssKQSEAYELSRQLLNVTQRLDQKEKEYETVIQDVKSMKDKMNHDQvsnSDLRAEQERLQRLLVSSNNTIGSLRQTETTL 273
                   4455555555554444588888888999**********************************64436899999********************9999 PP

  Bacillus_HBL 171 qgkik 175
                   +++ k
    EPX74453.1 274 RSQCK 278
                   99876 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.001
  Bacillus_HBL  96 dkkdkaellellekLqeeiqqnqkevkqlikeLkklklklakdsknFktdvdeltsilagdsgvisqlqneiedlqgkik 175
                   +k + ++  e+l++L +++ ++++ +++l k+ ++l++ + +d++++ ++  +l++il ++ + +++ ++ei+++q+ki+
    EPX74453.1 293 NKDEIKDYQEKLQALTNQLKKKEHMIEALRKDTQSLEN-TSADNAELIEKNRKLEKILRSSIASLKDSKEEITSMQNKIN 371
                   66677888999999999999999999999999999986.678999999999***************************98 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.24
  Bacillus_HBL 128 LkklklklakdsknFktdvdeltsilagdsgvisqlqneiedlqgkik 175
                   L+   + l+ +s +F++ +  l+++l+ ++ ++s+  + +++ +++++
    EPX74453.1 380 LQYKLNTLEDESGEFDSVKHHLQATLEESNYKLSEKTESLNHSNQQLQ 427
                   444445555666666666666666666666666666666665555544 PP

  == domain 4  score: 1.1 bits;  conditional E-value: 0.19
  Bacillus_HBL 100 kaellellekLqeeiqqnqkevkqlikeLkklklklakdsknFktdv..........deltsilagdsgvisqlqneied 169
                   ++  ++ +++L+e+i++ q+ v++++k L++ ++ +a++++++++ +           e ++   +++  +++l+ ++++
    EPX74453.1 447 RDRNSSEVKDLHEKITELQNLVTSSSKSLEDSQSIIAQKENEYSKLTslleekerllFESKNESVSKNQYVETLKDQVKK 526
                   555677899********************************999877455433333322222233333444444444444 PP

  == domain 5  score: 0.6 bits;  conditional E-value: 0.26
  Bacillus_HBL 129 kklklklakdsknFktdvdeltsilagdsgvisqlqneiedl 170
                   +++ + l+  +k+++ +++ lts l+    vi++l  e ++l
    EPX74453.1 514 NQYVETLKDQVKKYEDNIEDLTSELNERRNVIAKLGDEYKSL 555
                   455566666777777777777777777777777777776665 PP

  == domain 6  score: -2.5 bits;  conditional E-value: 2.4
  Bacillus_HBL 115 qqnqkevkqlikeLkklklklakdsknFktdvdeltsil....agdsgvisqlqneiedlqgki 174
                      ++++++ ++++++l ++++   k+ +  + ++++ l    ++++ ++ +l++e++++++++
    EPX74453.1 563 LAEKEQAQKALADVQDLCKAFQDRLKDSTLSLRNMEKLLeesqNSNGEEVHTLKAELSRIKSSL 626
                   3344555666666666555555555554444444444441110344466777777777777765 PP

  == domain 7  score: 0.3 bits;  conditional E-value: 0.33
  Bacillus_HBL  96 dkkdkaellellekLqeeiqqnqkevkqlikeLkklklklakdsknFktdvdeltsilagdsgvisqlqneiedlqg 172
                   + ++  +l++ l+++++++ ++  +v ++ +++++l    +kd ++++++ +e    + + ++  ++lq++ +d q+
    EPX74453.1 608 NGEEVHTLKAELSRIKSSLDEKDSYVYKVNEQIMSL----NKDFNDLQANNEEQSRSYDSLNASFAELQKKFNDSQE 680
                   555666788888888888888888887777777765....5666677777777777777777777777776666554 PP

  == domain 8  score: 2.4 bits;  conditional E-value: 0.076
  Bacillus_HBL  65 evkPqliktiqdiigYstkFqsyyktlveav....dkkdkaellellekLqeeiqqnqkevkqlikeLkklklklakdsknFktdvdeltsilag 155
                   e++ +l k+ +   + s++ + y+++++e+       +d  +l++ le   ++ q     +++ +  Lk+++++l+++ ++F++  +++   l++
    EPX74453.1 701 ETEDSLRKLEEHNRDLSDQLNVYKDQVEEKEnfiiSLGDLRKLKDNLESKLDSCQRSYDDSQSEVTYLKSMNESLEAKHSTFSSSFEKISTELQS 795
                   55555555556666667888999999988754446899999999999988889999999999999999999999999999999999888877776 PP

  == domain 9  score: 0.9 bits;  conditional E-value: 0.21
  Bacillus_HBL 103 llellekLqee...iqqnqkevkqlikeLkklklklakdsknFktdvdeltsilagdsgvisqlqneiedlqgki 174
                   l+e +++L+++   + q  ++++++ ++L+   +kl+++   +k+ ++++ s l++++ v++ l  ++++lq+++
    EPX74453.1 817 LTEEYKELSSDysgLKQAYQNSEESNNNLRVNSSKLTEEIGHLKSSLQNVVSSLSSSKVVMNSLTDANKRLQDEL 891
                   566666666543336677777888888999999999999999999999999999999999999999999999875 PP

  == domain 10  score: 0.7 bits;  conditional E-value: 0.25
  Bacillus_HBL 100 kaellellekLqeeiqq...nqkevkqlikeLkklklklakdsknFktdvdeltsilagd 156
                   + +l+e +++L++++q+      ++k +++ L++ +++l+ + + + ++ + +t+ l++d
    EPX74453.1 849 SSKLTEEIGHLKSSLQNvvsSLSSSKVVMNSLTDANKRLQDELAVLRSNHEGVTKQLNSD 908
                   334444455554443330002333444455555555555555555555555555555555 PP

  == domain 11  score: 13.6 bits;  conditional E-value: 2.7e-05
  Bacillus_HBL   97 kkdkaellellekLqeeiqqnqkevkqlikeLkklklklakdsknFktdvdel...tsilagdsgvisqlqneiedlqgkikk 176 
                    +++k++l +  e+L++++ +   evk++i++L++l++   + +++Fk++ del    +il+ +   ++ql++e +++ ++ik+
    EPX74453.1  948 EQEKEGLFKEKEDLNQKALSLADEVKDKIEKLSNLEVLHSSREEEFKNARDELsekSKILSQTMEIVKQLEEEKSTTGKEIKH 1030
                    5789*******************************************99865522278********************99996 PP

  == domain 12  score: -1.7 bits;  conditional E-value: 1.4
  Bacillus_HBL   99 dkaellellekLqeeiqqnqkevkqlikeLkklklklakdsknFktdvdeltsilagd 156 
                     k+++ e l  L++++ + q + +++i+e ++l +kl k + + ++  +  +s+l  +
    EPX74453.1 1034 SKENIEEELRTLNSSLASLQRSLEDQIAEKENLSEKLVKSQDSISALEKDQESVLLEK 1091
                    5899999******************************999999888777777776433 PP

  == domain 13  score: -3.7 bits;  conditional E-value: 5.4
  Bacillus_HBL  101 aellellekLqeeiqqnqkevkqlikeLkklklklakdsknFktdvdeltsilagdsgvisqlqneiedlqg 172 
                    +++ ++l++L+++++++  ++++l+k+Lk+ + +++ +  + +++++  +++la +s + s++q e + l++
    EPX74453.1 1130 EDAFSKLKELNQKLIEKISQSEDLSKQLKEKNAAVDDKLLDTTKQLKDTEAMLAQKSQEFSDVQSEKNLLNQ 1201
                    556667777777777777777777777777777777777777777777777777777777777776665555 PP

  == domain 14  score: -4.3 bits;  conditional E-value: 8.3
  Bacillus_HBL  108 ekLqeeiqqnqkevkqlikeLkklklklakdsknFktdv...deltsilagdsgvisqlqneiedl 170 
                    +kL+e+ +   ++  + +k+Lk+ +  la++s++F+      d l++ l+  +   ++l+++++ +
    EPX74453.1 1211 KKLEEKNTAMDNKLLDAMKQLKDTEAMLAQKSQEFSDVQsekDLLNQQLSEAENSSKKLEEKNTAM 1276
                    677788888888888999999999999999999997432222555555555555555555555555 PP

  == domain 15  score: -3.3 bits;  conditional E-value: 4.3
  Bacillus_HBL  107 lekLqeeiqqnqkevkqlikeLkklklklakdsknFk...tdvdeltsilagdsgvisqlqneiedlqgk 173 
                     +kL+e+ +   ++  + +k+Lk+ ++ la++s++F+   +++d l++  +  + +is l + i+++++ 
    EPX74453.1 1322 SKKLEEKNTAMDNKLLDAMKQLKDTETMLAQKSQEFSyvqSEKDLLNQQFSEAEENISSLHQSIAQFEND 1391
                    5789999999999999********************73335679999999999***********999875 PP

  == domain 16  score: -0.8 bits;  conditional E-value: 0.73
  Bacillus_HBL  105 ellekLqeeiqqnqkevkqlikeLkklklklakdsknFktdvdeltsilagdsgvisqlqneiedlqg 172 
                    ++l+ L++     +k   +   +L    ++l+ ++ +F++ ++   s l+ ++  i  l ++i++lq 
    EPX74453.1 1490 SDLNSLSQLFSDTKKDYASREHDLITQLNDLNLEVDSFSKSIESNSSELQRKEELIGGLNQKINNLQR 1557
                    44444444444333333333333444445555555555555555555555555555555555555554 PP

  == domain 17  score: -2.2 bits;  conditional E-value: 1.9
  Bacillus_HBL  126 keLkklklklakdsknFktdvdeltsilagdsgvisqlqneiedlqgk 173 
                     +L    ++l+ ++ +F++ ++   s l+ ++  i  l ++i++lq  
    EPX74453.1 1511 HDLITQLNDLNLEVDSFSKSIESNSSELQRKEELIGGLNQKINNLQRD 1558
                    333333334444444444444444444444444444444444444433 PP

  == domain 18  score: -2.6 bits;  conditional E-value: 2.5
  Bacillus_HBL  108 ekLqeeiqqnqkevkqlikeLkklklklakdsknFktdvdelts 151 
                    +kL e i    ke +++++eL+  k + +k +++++++ +el  
    EPX74453.1 1581 NKLTERIEIVTKEKQSVSEELTGIKMSYEKANNKLSATEAELHF 1624
                    33333433334444444444444444444444443333333322 PP

  == domain 19  score: 2.4 bits;  conditional E-value: 0.073
  Bacillus_HBL  105 ellekLqeeiqqnqkevkqlikeLkklklklakds...knFktdvdeltsilagdsgvisqlqneiedlqgkik 175 
                    + l+  q+++ +++ e+k+l+ +L+ lk+k+++     k ++ d+++  ++++   ++i  l++ i++ ++k++
    EPX74453.1 1620 AELHFVQDNLSKKEDESKKLSSNLHTLKKKTDEHMvliKGYEVDLQNSANTINHHLATIGSLEKVISENKEKLE 1693
                    56788899************************9963447788899*********************99988865 PP

  == domain 20  score: -2.5 bits;  conditional E-value: 2.4
  Bacillus_HBL   97 kkdkaellellekLqeeiqqnqkevkqlikeLkklklklakdsknFktdvdeltsilagdsgvisqlqneiedlqgk 173 
                    +k k++  ++l kL+ee+ + ++++++ +++L++ + k a++ +n+ +  +e  s+   + ++++  q+ ++ +q++
    EPX74453.1 1735 QKFKNNSEDKLAKLEEELHTLKNSSEEYVQKLQDAECK-ANNLQNLLNRSNEELSVKDQQCKELQSTQQSLTVVQNE 1810
                    45566667777777777777777777777777776655.34455555555444444444444555555554444444 PP

  == domain 21  score: -0.2 bits;  conditional E-value: 0.48
  Bacillus_HBL  105 ellekLqeeiqqnqkevkqlikeLkklklklakdsknFktdv...deltsilagdsgvisqlqneiedlqgkik 175 
                    + l++L +  ++     +q+ keL++ +++l+  ++++k++    + l+ +l g++++  +l+ e+++  + ik
    EPX74453.1 1774 NNLQNLLNRSNEELSVKDQQCKELQSTQQSLTVVQNELKAKCstlSSLEDVLTGTQAHNTELEGEVKRSMERIK 1847
                    456666666666666678999*****************9998444667789***********999999988887 PP

  == domain 22  score: -2.8 bits;  conditional E-value: 3
  Bacillus_HBL  102 ellellekLqeeiqqnqkevkqlikeLkklklklakdsknFktdvdelts 151 
                    ++++l ++L+++  +  ++ ++ i +L++lk+ ++k +k +k+ +++ ++
    EPX74453.1 1859 KVKKLHQQLSQQHDTFFEAEQKRILQLTNLKDTVKKQDKHLKKLIQKQDE 1908
                    56677777777777777888888999999999999888888877755543 PP

>> TRAF_BIRC3_bd  TNF receptor-associated factor BIRC3 binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   1.6     0.014        23      26      61 ..     296     331 ..     273     333 .. 0.90
   2 ?    0.7   0.2      0.29   4.7e+02      43      59 ..     358     374 ..     342     378 .. 0.85
   3 ?   -2.3   0.5       2.4   3.8e+03       2      57 ..     380     435 ..     379     442 .. 0.72
   4 ?   -2.4   0.1       2.7   4.4e+03      47      60 ..     453     466 ..     445     487 .. 0.64
   5 ?   -3.2   0.2       4.7   7.7e+03      34      57 ..     517     540 ..     512     548 .. 0.61
   6 ?    0.6   1.8       0.3   4.9e+02       8      53 ..    1037    1082 ..    1031    1087 .. 0.89
   7 ?   -1.0   0.2      0.97   1.6e+03      31      59 ..    1361    1389 ..    1347    1391 .. 0.80
   8 ?   14.1   0.3   1.9e-05      0.03      23      61 ..    1520    1558 ..    1518    1560 .. 0.96
   9 ?   -2.6   1.4         3   4.8e+03      27      54 ..    1692    1720 ..    1678    1721 .. 0.73
  10 ?   -2.4   0.3       2.7   4.4e+03      38      62 ..    1844    1867 ..    1837    1869 .. 0.71

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.014
  TRAF_BIRC3_bd  26 EverssttieaverqrrldqekieaLekKvrqLert 61 
                    E+   + +++a+  q ++ + +ieaL k  ++Le t
     EPX74453.1 296 EIKDYQEKLQALTNQLKKKEHMIEALRKDTQSLENT 331
                    8999999***********************999976 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.29
  TRAF_BIRC3_bd  43 ldqekieaLekKvrqLe 59 
                      +e i ++++K+++Le
     EPX74453.1 358 DSKEEITSMQNKINELE 374
                    568999********998 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 2.4
  TRAF_BIRC3_bd   2 lekklsaLetkvatFEnIVsVLnrEverssttieaverqrrldqekieaLekKvrq 57 
                    l+ kl++Le   + F  +   L+   e s+ ++ +  +  +   +  + Le ++ +
     EPX74453.1 380 LQYKLNTLEDESGEFDSVKHHLQATLEESNYKLSEKTESLNHSNQQLQELEARITE 435
                    56677788888888887777777778888888877777777777777777777765 PP

  == domain 4  score: -2.4 bits;  conditional E-value: 2.7
  TRAF_BIRC3_bd  47 kieaLekKvrqLer 60 
                     ++ L +K+ +L+ 
     EPX74453.1 453 EVKDLHEKITELQN 466
                    46666666666653 PP

  == domain 5  score: -3.2 bits;  conditional E-value: 4.7
  TRAF_BIRC3_bd  34 ieaverqrrldqekieaLekKvrq 57 
                    +e ++ q ++ ++ ie L+  +++
     EPX74453.1 517 VETLKDQVKKYEDNIEDLTSELNE 540
                    566666667777777766655554 PP

  == domain 6  score: 0.6 bits;  conditional E-value: 0.3
  TRAF_BIRC3_bd    8 aLetkvatFEnIVsVLnrEverssttieaverqrrldqekieaLek 53  
                      +e+ ++t     + L+r  e  +++ e++++   + q+ i aLek
     EPX74453.1 1037 NIEEELRTLNSSLASLQRSLEDQIAEKENLSEKLVKSQDSISALEK 1082
                     567778888888999*****************************97 PP

  == domain 7  score: -1.0 bits;  conditional E-value: 0.97
  TRAF_BIRC3_bd   31 sttieaverqrrldqekieaLekKvrqLe 59  
                     +++ + +++q  +++e i +L + ++q e
     EPX74453.1 1361 QSEKDLLNQQFSEAEENISSLHQSIAQFE 1389
                     55566678899999999999999999977 PP

  == domain 8  score: 14.1 bits;  conditional E-value: 1.9e-05
  TRAF_BIRC3_bd   23 LnrEverssttieaverqrrldqekieaLekKvrqLert 61  
                     Ln Ev+++s  ie  +   +  +e i +L++K+++L+r 
     EPX74453.1 1520 LNLEVDSFSKSIESNSSELQRKEELIGGLNQKINNLQRD 1558
                     899**********************************96 PP

  == domain 9  score: -2.6 bits;  conditional E-value: 3
  TRAF_BIRC3_bd   27 verssttieaverqrrldqeki.eaLekK 54  
                      e ss + +a  +q   +++ki + Le+K
     EPX74453.1 1692 LEASSKETNAAIQQLDSEKRKIlKDLEQK 1720
                     78888888888889888888774678877 PP

  == domain 10  score: -2.4 bits;  conditional E-value: 2.7
  TRAF_BIRC3_bd   38 erqrrldqekieaLekKvrqLerti 62  
                     er +r d +  + L  Kv++L+  +
     EPX74453.1 1844 ERIKRRD-DRCDHLASKVKKLHQQL 1867
                     4555555.45689999999999765 PP

>> Mustang  Musculoskeletal, temporally activated-embryonic nuclear protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   1.0   0.00015      0.25      12      43 ..     989    1020 ..     985    1027 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00015
     Mustang   12 kEedlkgArskLgskkevksktyqvlkecEqa 43  
                  +Ee+ k+Ar +L++k+++ s+t +++k+ E+ 
  EPX74453.1  989 REEEFKNARDELSEKSKILSQTMEIVKQLEEE 1020
                  7**************************99985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2106 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3975  (0.221708); expected 358.6 (0.02)
Passed bias filter:                      662  (0.0369234); expected 358.6 (0.02)
Passed Vit filter:                       331  (0.0184617); expected 17.9 (0.001)
Passed Fwd filter:                       196  (0.010932); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 12.25u 0.57s 00:00:12.82 Elapsed: 00:00:02.02
# Mc/sec: 3152.73
//
Query:       EPX74454.1  [L=502]
Description: arf binding gamma-adaptin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.2e-46  157.2   0.0    4.5e-46  156.2   0.0    1.5  1  VHS              VHS domain
    1.5e-08   35.0   0.1    3.1e-08   33.9   0.1    1.6  1  Alpha_adaptinC2  Adaptin C-terminal domain
    0.00011   21.8   0.1    0.00032   20.3   0.1    1.8  1  GGA_N-GAT        GGA N-GAT domain
      0.006   16.9   0.2      0.006   16.9   0.2    2.5  3  GAT              GAT domain
     0.0066   17.0   0.8      0.015   15.8   0.8    1.6  1  MetRS-N          MetRS-N binding domain
  ------ inclusion threshold ------
       0.44   10.8   2.5        2.1    8.6   0.2    2.9  3  GlcNAc-1_reg     Putative GlcNAc-1 phosphotransferase regulat


Domain annotation for each model (and alignments):
>> VHS  VHS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.2   0.0   1.5e-49   4.5e-46       3     141 .]       6     149 ..       4     149 .. 0.97

  Alignments for each domain:
  == domain 1  score: 156.2 bits;  conditional E-value: 1.5e-49
                 HHHHHHHHHHHHT-TT-SS--HHHHHHHHHHHHCS.TCHHHHHHHHHHHHHT-SSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHHCTTT CS
         VHS   3 sasslekliekATdeslreedlslileicDlinek.eagpkeavrlikkkinsknphvallaLklldalvkNcGskfhleiaskeflnelvklilekkn 100
                  ++++e++i++ATd+++ e++l+l+lei+D+in k ++ p+ea+ +i k+ins np+v +laL+lld++vkNcG +fhl+i+s+efln +v+++++ + 
  EPX74454.1   6 VSRTIERYIDRATDQFNLEPNLALNLEIADYINAKkGNAPREAAFTILKRINSANPTVTYLALNLLDICVKNCGFPFHLQIGSQEFLNGFVSRFPKYPL 104
                 5788******************************99*************************************************************** PP

                 CHCS.HHHHHHHHHHHHHHHT....TT-TTGHHHHHHHHHHHHTT CS
         VHS 101 sklakvkkkvlelleeWadaf....knkpelkkisdvykllkrkg 141
                  +++k++kk+le+leeW++++    ++++e++ki+d+ +l+  +g
  EPX74454.1 105 PHMNKIQKKILEMLEEWNYMLcknnRHSQEFSKIHDLRELMAFQG 149
                 **********************999999*************9887 PP

>> Alpha_adaptinC2  Adaptin C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   0.1     1e-11   3.1e-08      11      96 ..     394     484 ..     384     499 .. 0.81

  Alignments for each domain:
  == domain 1  score: 33.9 bits;  conditional E-value: 1e-11
                      EEEEEEEEE.TTSTTEEEEEEEEEE-S.SS-EEEEEEEEEEBTTCEEEEEEES-S-B-.TTCEEEEEEEEEEES..CTTS-EEEEEEEEEE CS
  Alpha_adaptinC2  11 lqIgfkfek.perpgqiritlsftNks.sqpisnfsfqaavpkslklqlqppsstvlp.pnpggqitqvllien..pskkplrmrlrisyk 96 
                      l ++ k+ + +  +g++ + ++++N s  + +sn++fq+av ks+klq+ p  + +   p++++ +  +++i++  + +k++r r+r  ++
       EPX74454.1 394 LLLSAKLVSyNPASGTASYAVYLSNDSfASSVSNVTFQVAVMKSQKLQMLPLVGETTIaPKKQDAAYMTMNISGvsNDQKSIRIRWRSYWM 484
                      5555666666778899***********************************9998888799***********9988889999999986555 PP

>> GGA_N-GAT  GGA N-GAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.1   1.1e-07   0.00032       4      33 ..     181     210 ..     179     215 .. 0.90

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 1.1e-07
   GGA_N-GAT   4 eeksklLarLLkSknpeDLqaANrLIKsmV 33 
                 e ++ +L++LL+ + p DL +AN+L K + 
  EPX74454.1 181 EAHKAKLQELLRRGTPMDLAEANALMKVIA 210
                 67899**********************875 PP

>> GAT  GAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       4.1   1.2e+04      37      51 ..       7      21 ..       4      41 .. 0.47
   2 ?   -2.1   0.0       1.6   4.9e+03      35      46 ..     109     120 ..     106     140 .. 0.71
   3 !   16.9   0.2     2e-06     0.006      23      71 ..     251     299 ..     237     301 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 4.1
         GAT 37 qpriqklieetadee 51
                +++i ++i++ +d+ 
  EPX74454.1  7 SRTIERYIDRATDQF 21
                455555555533333 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.6
         GAT  35 amqpriqkliee 46 
                 ++q++i +++ee
  EPX74454.1 109 KIQKKILEMLEE 120
                 678888888877 PP

  == domain 3  score: 16.9 bits;  conditional E-value: 2e-06
         GAT  23 nellkeLyetckamqpriqklieetadeedllaelLqlNDeLnnvlerY 71 
                 +e l+   e++k  ++++++l+++  d+e  + +l++lN+ L+ vl+ Y
  EPX74454.1 251 DEPLESAIESLKVYKNKVVRLLQTEDDDEYYVHKLISLNELLHDVLHAY 299
                 566666678999************555555****************988 PP

>> MetRS-N  MetRS-N binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.8   5.2e-06     0.015      18     110 ..     172     262 ..     158     271 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 5.2e-06
                 HHHH--STT--EE-SS--S--EE-S--S----HHHHHHHHTT--TTTTSHHHH.HHHHHTTTGGGSSS--HHHHHHHHHHHHHHT-S---SS-- CS
     MetRS-N  18 alelaskglklevnedeaapqLttaeefrLfDanaiLryvldDfegeesdeyq.yalasleallyhkelvkehvtelvnkslenyLvsleepLs 110
                 a ela ++  le ++ +++  L  ++++ L +ana+++ v+  f++e++++y   a a +e++  +   v++h+++ +  sl++ L s  e L+
  EPX74454.1 172 AHELAMED--LEAHKAKLQELLRRGTPMDLAEANALMK-VIAGFDKENTEDYSaLASAEIESIKAKALRVQHHLENPTSVSLDEPLESAIESLK 262
                 45556444..5667777777889************998.7899**999999963788889999999999**************99987777665 PP

>> GlcNAc-1_reg  Putative GlcNAc-1 phosphotransferase regulatory domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1      0.38   1.1e+03      46      67 ..     157     179 ..     150     190 .. 0.82
   2 ?    8.6   0.2    0.0007       2.1      27      59 ..     247     279 ..     234     289 .. 0.85
   3 ?   -1.2   0.0      0.85   2.5e+03      12      52 ..     400     435 ..     392     464 .. 0.65

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.38
  GlcNAc-1_reg  46 ekrvalld.lndfkdldeLlkdd 67 
                   e +va+++  nd +  +eL  +d
    EPX74454.1 157 EDSVAVMNpSNDLRSAHELAMED 179
                   899****8457889999998765 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0007
  GlcNAc-1_reg  27 kskLeeklaekvkllelylekrvalldlndfkd 59 
                      L+e l + +++l++y +k v ll+ +d ++
    EPX74454.1 247 SVSLDEPLESAIESLKVYKNKVVRLLQTEDDDE 279
                   56799**********************998765 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 0.85
  GlcNAc-1_reg  12 llsglPatfketnelkskLeeklaekvkllelylekrvall 52 
                   l+s  Pa +  +  +    ++++a+ v+ +      +va++
    EPX74454.1 400 LVSYNPASGTASYAVY-LSNDSFASSVSNVTF----QVAVM 435
                   5556666665533332.346889999888754....34444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (502 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       824  (0.0459591); expected 358.6 (0.02)
Passed bias filter:                      540  (0.0301188); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.43
# Mc/sec: 3506.61
//
Query:       EPX74455.1  [L=275]
Description: ribosome biogenesis protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-52  176.9   0.0    1.8e-52  176.4   0.0    1.2  1  Ribo_biogen_C  Ribosome biogenesis protein, C-terminal
    1.7e-12   46.9   0.1    3.1e-12   46.1   0.1    1.5  1  RLI            Possible Fer4-like domain in RNase L inhibitor


Domain annotation for each model (and alignments):
>> Ribo_biogen_C  Ribosome biogenesis protein, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  176.4   0.0     2e-56   1.8e-52       1     127 []      63     189 ..      63     189 .. 0.99

  Alignments for each domain:
  == domain 1  score: 176.4 bits;  conditional E-value: 2e-56
                    EEE-TT-SSB--GGGHHHHHHT-EEEE---TTT--GGGTTT-E....EB--S-B--STTTTT-BS---HHHHHHHHHHHTT-HHHHHHHHTSSTTH CS
  Ribo_biogen_C   1 ivlspkakkvlspaDreiveksgiavvdcsWarleevkfkklkakeerlLPyLvAaNpvnYgkplkLscvEAlaaalyilglkeeaeellskfkwg 96 
                    +v++p++k+ +spaDrei ++ g +vv+csWa+++e++f+++ +++erlLPyLvA+Np+nYg+p++L+c+EAlaa++yi+g+k+ea+ l+++fkwg
     EPX74455.1  63 VVVTPNGKSPVSPADREIFDNGGASVVECSWAKIDEIPFSRIGGRCERLLPYLVATNPINYGRPWRLNCAEALAACMYIVGYKDEARLLMENFKWG 158
                    79********************************************************************************************** PP

                    HHHHHHCHHHHHHH.TT--HHHHHHHHHHHH CS
  Ribo_biogen_C  97 eeFlelnkelleeYakckdseevvevqkeyl 127
                    ++F+++n+ell+ Ya+ckds+++++ qk+yl
     EPX74455.1 159 HAFFDVNEELLDIYASCKDSDDIQQKQKQYL 189
                    ****************************996 PP

>> RLI  Possible Fer4-like domain in RNase L inhibitor, RLI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.1   0.1   3.5e-16   3.1e-12       2      35 .]      26      59 ..      25      59 .. 0.97

  Alignments for each domain:
  == domain 1  score: 46.1 bits;  conditional E-value: 3.5e-16
                -EEEES---------TTHHHHHTTSEEEESS--S CS
         RLI  2 rlAivdadqCdPKKCtgkkcarfcpvrlvrtgkk 35
                +lA++d+++C+P  C+gk+++r++++r++r+g+k
  EPX74455.1 26 PLAMWDFGHCNPNACSGKRLERLGCIRNLRIGQK 59
                79******************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (275 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       970  (0.0541023); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 1793.38
//
Query:       EPX74456.1  [L=1006]
Description: lgl family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.4e-74  248.5   0.0    3.2e-72  243.4   0.0    2.2  1  Lgl_C        Lethal giant larvae(Lgl) like, C-terminal
  ------ inclusion threshold ------
       0.12   12.7   0.0          2    8.8   0.0    3.0  3  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain


Domain annotation for each model (and alignments):
>> Lgl_C  Lethal giant larvae(Lgl) like, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  243.4   0.0   3.6e-76   3.2e-72       3     393 .]     530     905 ..     528     905 .. 0.94

  Alignments for each domain:
  == domain 1  score: 243.4 bits;  conditional E-value: 3.6e-76
                 -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEE..EEEEEEE---S-SEEEEEE-BTSE CS
       Lgl_C   3 evksvslaaetlElavaletGeVvvfkfgknknfknkeksgaleleqkrlqlknskeklldisdrakpslkeg..flPvtllnlkqgevsalkvSniGF 99 
                 ++ svsl++ + E++ a ++G+V++++ ++  n+                     + +l+    r+++s++ +  +  +  ++lkqg+++ +++S+iGF
  EPX74456.1 530 KIISVSLSSTNCEFSTADNFGRVIICRVKDSLNPL--------------------PYQLASGIFRLDDSFAIDgiIYGQFCIDLKQGPITTNCMSDIGF 608
                 799************************99988877....................456888888999998865589999******************** PP

                 EEEEETTSEEEEEETTTTEEEEEEEGGG.......T-SS----EEEEEEEEEE-TTSSSEEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS- CS
       Lgl_C 100 vAigyesgslviiDlRGPaviynenise.....kllskeksskvttieFsvmelggdgyssilllvGtnkGelltfkilPessGrfevefadktaadds 193
                 v+igy +gsl++iDlRGP++++n+++se     k +s++++ ++++ eF++m+l++dg  si l++ tn G +l f+i   ssG+++v f +  +    
  EPX74456.1 609 VCIGYANGSLAVIDLRGPHILCNTSLSElgverKSKSSSSTDYISSAEFVIMNLNNDGLASIHLIAVTNTGIVLSFQIGLTSSGNYSVTFLSYEKLGIF 707
                 ****************************999888888888999999*********************************9******************* PP

                 ---EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT- CS
       Lgl_C 194 kilkiasieketgesalAtiskmqklskglvveglvvatskkdirvikpakskethksfedellcsaisvvkteekkkgivlvaltkdgevkvlslPsL 292
                 ++++i+++ +e+g+ a At+ ++q ++ +   + ++++++++++rv + +++ ++  ++++  +c  +sv+    ++++ ++++++++ +v ++slP+L
  EPX74456.1 708 NVHSIIPL-TESGQHAIATGTSLQMVGLQS-EKIYLLYIGETGMRVYSRFSKCSSTTDWSK-HACYKASVIFSSASRQMGSVACIMSNLNVYWFSLPNL 803
                 ********.9**************877654.46799***********************77.688888888777799********************** PP

                 -EEEEEE-SS---HHHHTT-EE-TTS-.EEEE-SSSEEEEEEEES----..------B---TT----------TTTS-SS-----HHHHHHHHH-TT-- CS
       Lgl_C 293 keikkvklpealdarrlsessilrnGd.ilvrlgkleaallsvlgksktskeeeetdtlynekaaipprPqvsslqWirGtqyvskedLdlLigGpnRp 390
                  e ++++lp ++d+r+l+  +i ++Gd ++ ++g +e+a+ svlg ++++ ++ +  ++++  +++pprP+ s+++W+ G q+++ ++L+lL+gG++Rp
  EPX74456.1 804 VEERRARLPDDIDERMLRFGNITEDGDfVFPTIGGTELAFGSVLGMGRKMFASISCNLITKDPLVLPPRPTLSTWKWLMGGQTTTSDELNLLLGGEHRP 902
                 ***************************77899*****************999999999999************************************** PP

                 --S CS
       Lgl_C 391 psk 393
                  sk
  EPX74456.1 903 VSK 905
                 998 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.67     6e+03       6      22 ..      55      71 ..      49      81 .. 0.67
   2 ?    8.8   0.0   0.00022         2      39      74 ..     251     286 ..     238     320 .. 0.85
   3 ?   -2.0   0.0       0.5   4.5e+03      52      75 ..     608     631 ..     604     637 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.67
  ANAPC4_WD40  6 tmDLiAlatedgellvf 22
                 +  L+A+a+++++++++
   EPX74456.1 55 QQGLLAVASTSKRIYIY 71
                 45688888888887765 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00022
  ANAPC4_WD40  39 sevrsLaWkpdgklLavaysdgevrlldaesgkvvh 74 
                    v++++W+p g+ +   y+d+++ + d e++  ++
   EPX74456.1 251 PMVKGIHWSPCGEYFLSYYEDSSIAFWDTEKEMPIQ 286
                  5699*************************9987765 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 0.5
  ANAPC4_WD40  52 lLavaysdgevrlldaesgkvvhs 75 
                  + +++y++g++ ++d    +++ +
   EPX74456.1 608 FVCIGYANGSLAVIDLRGPHILCN 631
                  6799*********99887776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1006 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       549  (0.0306208); expected 358.6 (0.02)
Passed bias filter:                      502  (0.0279993); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.78u 0.28s 00:00:01.06 Elapsed: 00:00:00.45
# Mc/sec: 6650.92
//
Query:       EPX74457.1  [L=1116]
Description: STE/STE11 protein kinase Mkh1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-67  227.7   0.0      3e-67  226.8   0.0    1.5  1  Pkinase         Protein kinase domain
      2e-42  145.3   0.0    3.5e-42  144.5   0.0    1.3  1  Pkinase_Tyr     Protein tyrosine kinase
    3.5e-07   29.8   0.0    9.6e-06   25.1   0.0    2.3  2  Kinase-like     Kinase-like
     0.0026   16.6   0.1     0.0059   15.4   0.1    1.5  1  Pkinase_fungal  Fungal protein kinase
  ------ inclusion threshold ------
      0.071   12.5   0.0       0.16   11.3   0.0    1.5  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
       0.09   12.7   0.0       0.23   11.4   0.0    1.6  2  APH             Phosphotransferase enzyme family
        7.5    6.6   5.4       0.43   10.6   0.1    1.7  2  Integrase_Zn    Integrase Zinc binding domain


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  226.8   0.0   1.2e-70     3e-67       3     264 .]     826    1093 ..     824    1093 .. 0.91

  Alignments for each domain:
  == domain 1  score: 226.8 bits;  conditional E-value: 1.2e-70
                  EEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH........HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHH CS
     Pkinase    3 kleklGeGsfGkVykaveketgkivAvKkikkekakkkke........kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladller 91  
                  k e +G+G++G+V+ a++ +tg+ +AvK+++  ++ ++ +        +++ +Ei+ ++ l+h n+v+++++ ++++++ ++leyv+gg++ + l++
  EPX74457.1  826 KGELIGNGTYGRVFIAMNVNTGELIAVKQVEIPQTVNTYHerlwknivDSINSEIETMADLEHINVVQYLGFEKTDTDISIFLEYVSGGSVSRCLRN 922 
                  5689***************************9999998888899999999*********************************************** PP

                  HSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS...BCTTTSCGGGS-HHHH..TTSCBSHHHHHHHH CS
     Pkinase   92 kgslseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk...ltsfvgtseYlAPEvl..keneyskkvDvWsl 183 
                   g ++e+ +++i+kq+l+gl+ylHskgiiHrDlK +N+Lid +g+ Ki+DFG++k+ e+        s+ gt  ++APEv+  ++++ys+kvD+Wsl
  EPX74457.1  923 YGPFEESVVRFITKQVLQGLAYLHSKGIIHRDLKADNLLIDFDGMCKISDFGISKHSENVYGndaNLSMQGTIFWMAPEVIdsNHRGYSAKVDIWSL 1019
                  *******************************************************9999877777899*************888899********** PP

                  HHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS....-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase  184 Gvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeasei....seeakdllkkllkkdpkkRltaeellqhpyl 264 
                  G++++e+l g+ p+s   ++e     ++    ++k lg++k++ p +se+    se+ +++l+++++ d  kR+taeell+hp+l
  EPX74457.1 1020 GCVVLEMLGGNRPWS---TEE----AIQA---MFK-LGTEKKAPPLPSELrkrvSEDSINFLNECFTIDADKRPTAEELLSHPFL 1093
                  ***************...222....2222...333.344455555555555555*****************************97 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.5   0.0   1.4e-45   3.5e-42       4     257 ..     827    1089 ..     825    1090 .. 0.86

  Alignments for each domain:
  == domain 1  score: 144.5 bits;  conditional E-value: 1.4e-45
                   EEEEEEESSEEEEEEEEET.....TTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHH CS
  Pkinase_Tyr    4 gkklGeGafGkVvegtlkg.....ekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrk 94  
                   g+ +G+G++G+V+ +   +       ++ e+   v t +e+  ++  +++ +e+++m +l+h n+v++lg+   +  + i +eyv+gG+++  Lr+
   EPX74457.1  827 GELIGNGTYGRVFIAMNVNtgeliAVKQVEIPQTVNTYHERLWKNIVDSINSEIETMADLEHINVVQYLGFEKTDTDISIFLEYVSGGSVSRCLRN 922 
                   5789*********999885455555555555556666666666666788899*******************************************9 PP

                   TCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE..EEHHHHH CS
  Pkinase_Tyr   95 kekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk..ftsksDv 188 
                       +++ + +  ++ qv +G++yL+sk ++Hrdl a N L++ + ++kisDfG++++ e+     ++ + +  + WmapE++++++  ++ k D+
   EPX74457.1  923 Y--GPFEESVVRFITKQVLQGLAYLHSKGIIHRDLKADNLLIDFDGMCKISDFGISKHSENVYGNDANLSMQGTIFWMAPEVIDSNHrgYSAKVDI 1016
                   8..999999999999******************************************9966666688888999**********998888******* PP

                   HHHHHHHHHHHTTSSGTTTTSHHHHHHHHH.HTTEES-BBTTSBHHHH....HHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr  189 WsfGvllwEiftlgespypglkneevlekl.kegkrlekpekcpeely....elmkkcweedpeeRptfselve 257 
                   Ws G ++ E++  g++p+++ ++ +++ kl +e+k  + p++  +++     +++++c++ d+++Rpt +el++
   EPX74457.1 1017 WSLGCVVLEMLG-GNRPWSTEEAIQAMFKLgTEKKAPPLPSELRKRVSedsiNFLNECFTIDADKRPTAEELLS 1089
                   ***********9.********999999998677777777877666654222279**************999875 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0     0.039     1e+02      13      49 ..     823     859 ..     812     867 .. 0.88
   2 !   25.1   0.0   3.7e-09   9.6e-06     147     251 ..     932    1034 ..     890    1058 .. 0.80

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.039
  Kinase-like  13 tlvrgellkkgdrsvvfevkdqetgeplavkvfllps 49 
                  +  +gel+++g  + vf + +++tge +avk+  +p+
   EPX74457.1 823 KWLKGELIGNGTYGRVFIAMNVNTGELIAVKQVEIPQ 859
                  56799**************************988776 PP

  == domain 2  score: 25.1 bits;  conditional E-value: 3.7e-09
  Kinase-like  147 lllTlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvr....agtkvvlsevekgf.aPpEllgsrggytrknktkmthkldaWqlG 237 
                     +T q+++  a+L++kg++h ++++dnll d +g  ++ +f+        +g+ + ls+    f   pE++ s       n+  ++ k+d W lG
   EPX74457.1  932 RFITKQVLQGLAYLHSKGIIHRDLKADNLLIDFDGMCKISDFGISKHsenvYGNDANLSMQGTIFwMAPEVIDS-------NHRGYSAKVDIWSLG 1020
                   57899*************************************85543122267777777777554378999999.......6678999******** PP

  Kinase-like  238 lviyriwclklPlt 251 
                    v++ +   + P  
   EPX74457.1 1021 CVVLEMLGGNRPWS 1034
                   *****988888765 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.1   2.3e-06    0.0059     314     392 ..     937    1008 ..     930    1020 .. 0.90

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 2.3e-06
  Pkinase_fungal  314 DaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlkgeeHs 392 
                      ++++g+  L+  +gi+HrD  ++N+li       +    ++D+ + k+ +++  ++++    GT+ +ma ev+  ++H+
      EPX74457.1  937 QVLQGLAYLH-SKGIIHRDLKADNLLID-----FDGMCKISDFGISKHSENVYGNDANLSMQGTIFWMAPEVID-SNHR 1008
                      67889999**.****************9.....6677789***************999**************99.5665 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   6.1e-05      0.16     106     155 ..     917     966 ..     908     982 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 6.1e-05
         Kdo 106 edllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqee 155
                   +l+++  ++e++ r + k+v +  a lh+ g+ H+dl a n+l++ ++
  EPX74457.1 917 SRCLRNYGPFEESVVRFITKQVLQGLAYLHSKGIIHRDLKADNLLIDFDG 966
                 667777667899999999****************************9877 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   8.9e-05      0.23     152     181 ..     930     963 ..     882     979 .. 0.76
   2 ?   -4.2   0.0         5   1.3e+04      53      84 ..     998    1034 ..     988    1043 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 8.9e-05
                 HHHHHHHH--S....SS-EEEE-SS-SGGGEEEC CS
         APH 152 vlaalaallpg....elptvllHgDlhpgNllvd 181
                 v + + + ++       +++++H+Dl+ +Nll+d
  EPX74457.1 930 VVRFITKQVLQglayLHSKGIIHRDLKADNLLID 963
                 5555555555556666789**************9 PP

  == domain 2  score: -4.2 bits;  conditional E-value: 5
                  B--B-CTTBS-EEETTE.........EEEEEE----EE-SS CS
         APH   53 pvPevlagdtddeeigl.........lfalieyvpgrsllr 84  
                   +Pev++     +++g+           +++e ++g  ++ 
  EPX74457.1  998 MAPEVID----SNHRGYsakvdiwslGCVVLEMLGGNRPWS 1034
                  6899999....567777688888899999999999999998 PP

>> Integrase_Zn  Integrase Zinc binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.1   0.00017      0.43       9      28 ..      76      95 ..      74      99 .. 0.91
   2 ?   -5.6   2.3         7   1.8e+04       2       9 ..    1108    1115 ..    1108    1115 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00017
  Integrase_Zn  9 HvNakaLrkkFgitrkqAre 28
                  H Na aL++k++i+ ++A +
    EPX74457.1 76 HGNALALAQKYNIPDEEAAQ 95
                  99****************87 PP

  == domain 2  score: -5.6 bits;  conditional E-value: 7
  Integrase_Zn    2 kelHelhH 9   
                    k lHe hH
    EPX74457.1 1108 KLLHERHH 1115
                    679***** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1116 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       506  (0.0282224); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.74u 0.28s 00:00:01.02 Elapsed: 00:00:00.44
# Mc/sec: 7552.50
//
Query:       EPX74458.1  [L=794]
Description: exosome subunit Rrp6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.6e-51  173.8   1.0    5.3e-51  172.8   0.5    1.8  2  DNA_pol_A_exo1  3'-5' exonuclease
    2.6e-19   69.7   1.1    2.6e-19   69.7   1.1    3.4  3  PMC2NT          PMC2NT (NUC016) domain
    1.1e-14   54.2   0.0    3.2e-14   52.6   0.0    1.8  1  HRDC            HRDC domain


Domain annotation for each model (and alignments):
>> DNA_pol_A_exo1  3'-5' exonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0      0.93   5.6e+03      11      31 ..      14      37 ..      12      52 .. 0.80
   2 !  172.8   0.5   8.9e-55   5.3e-51       2     175 ..     218     384 ..     217     385 .. 0.99

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 0.93
                    HHHHHHHTTSS...EEEEEEEEE- CS
  DNA_pol_A_exo1 11 eelieelknlk...vvavDtEtts 31
                    +++++el++l+   + ++D+E++ 
      EPX74458.1 14 TAFCSELEKLDipfYRSIDSEFSE 37
                    578999999999888899999875 PP

  == domain 2  score: 172.8 bits;  conditional E-value: 8.9e-55
                     EEEHSHHHHHHHHHHHTTSSEEEEEEEEE-SSSTTSSEEEEEEEEECSSEEEEEECTTTTTT-HGHHHHHHHT-TTSEEEESSHHHHHHHHHHHH CS
  DNA_pol_A_exo1   2 eivtdeeeleelieelknlkvvavDtEttsldlisatlvliliqlgekeeayiidplelgddvalealkrlledenitkvghnakfDlevlardf 96 
                      +v++ee+l+++++elk+++++avD E++++++  +++ ++l+q++++++++++d+l+l+d+  l+ l+ +++d++i kv+h+a +D+ +l+rdf
      EPX74458.1 218 IWVDTEEALKDMLKELKQSNAIAVDLEHHDYRS--FRGYVCLMQISNRKYDWVVDTLQLRDE--LQCLNVVFTDPKIVKVLHGANMDIIWLQRDF 308
                     69*******************************..**************************9..******************************* PP

                     TS--SSEEEHHHHHHHTTHSTTSSHHHHHHHHHSB---GHCCTTSSTTTSSS-HHHHHHHHHHHHHTHHHHHHHHHHHH CS
  DNA_pol_A_exo1  97 gielenlfdtmlaayvldyershsLdsLaekylgdleldkeeqiakwqkarplleeqllYAaeDadvllrlfkkLtkel 175
                     g ++ n+fdt+ a++vl++e  h+L+ L++ky++ +e dk +q+a+w+  rpl++e+l+YA  D+++ll+++++L++el
      EPX74458.1 309 GLYIVNIFDTYCATKVLGFEG-HGLAFLLKKYCD-YEADKRYQMADWR-IRPLPKEMLSYAQSDTHYLLYIWDHLRNEL 384
                     *********************.************.*************.***************************997 PP

>> PMC2NT  PMC2NT (NUC016) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.7   1.1   4.4e-23   2.6e-19       1      92 []      11      98 ..      11      98 .. 0.96
   2 ?    0.0   0.5      0.23   1.4e+03      25      51 ..     585     611 ..     565     696 .. 0.68
   3 ?   -2.7   0.1       1.6   9.8e+03      36      36 ..     710     710 ..     674     757 .. 0.61

  Alignments for each domain:
  == domain 1  score: 69.7 bits;  conditional E-value: 4.4e-23
      PMC2NT  1 veatraanaLpaeDldfyrsldpefaksldeqserllslinsllklaaskseisassklededdveekfksvvdvvDsllEkadtcLDeltg 92
                +++t  +++L + D+ fyrs+d+ef+++l++ s r+l+ i+ l + +++++         d++d+++++ +v+d++D l+Ek+d+cLD+++g
  EPX74458.1 11 MNTTAFCSELEKLDIPFYRSIDSEFSENLKNVSLRILKNIQLLFSKVDKSRASDFV----DVEDIDNRWMEVSDTLDILFEKTDYCLDKAKG 98
                6899*********************************************9998665....99**999**********************997 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.23
      PMC2NT  25 faksldeqserllslinsllklaasks 51 
                 f + l++ +e+lls+++++  +++   
  EPX74458.1 585 FPSTLKDRKEKLLSVTEKVSLNVSPIV 611
                 445566666666666666633333222 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 1.6
      PMC2NT  36 l 36 
                  
  EPX74458.1 710 K 710
                 2 PP

>> HRDC  HRDC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.6   0.0   5.4e-18   3.2e-14       4      68 .]     447     511 ..     446     511 .. 0.98

  Alignments for each domain:
  == domain 1  score: 52.6 bits;  conditional E-value: 5.4e-18
                 HHHHHHHHHHHHHHHHTS-HHHHS-HHHHHHHHHH---SHHHHHTSTTT-HHHHHHHHHHHHHHH CS
        HRDC   4 llkaLrewReelAreedvppyvvfpdktLleiAeklPttleeLlqiegvgkrklekygeeileai 68 
                 ++kaL++wR+++Ar+ed++ ++v+p++ L  iA+ +P  + +Ll+i++  +  ++ y++ei+++i
  EPX74458.1 447 IFKALHDWRDSTARKEDESVRYVMPNHLLTTIAANKPMETLDLLSISKQLTPLVRMYADEIVQVI 511
                 69************************************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (794 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1742  (0.097161); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.72u 0.29s 00:00:01.01 Elapsed: 00:00:00.44
# Mc/sec: 5422.80
//
Query:       EPX74459.1  [L=286]
Description: sec14 cytosolic factor family Sec14 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.8e-37  127.9   0.0    7.1e-37  126.6   0.0    1.6  2  CRAL_TRIO    CRAL/TRIO domain
    1.9e-09   37.5   1.7    2.1e-09   37.4   0.2    1.9  2  CRAL_TRIO_N  CRAL/TRIO, N-terminal domain
     0.0023   18.1   0.1      0.005   17.0   0.0    1.7  2  CRAL_TRIO_2  Divergent CRAL/TRIO domain


Domain annotation for each model (and alignments):
>> CRAL_TRIO  CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0      0.37   2.2e+03     138     157 ..      63      82 ..      49      82 .. 0.81
   2 !  126.6   0.0   1.2e-40   7.1e-37       3     159 .]      98     262 ..      97     262 .. 0.94

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.37
   CRAL_TRIO 138 nteatlekyidpeqlpkelG 157
                 n +++le ++  eq+ ke+G
  EPX74459.1  63 NLQQALEMFVKSEQWRKEFG 82 
                 45568999999999999998 PP

  == domain 2  score: 126.6 bits;  conditional E-value: 1.2e-40
   CRAL_TRIO   3 ileggkvgihgrDkegrpvlylrlgrfdpk...kls.leelvralvlvlerllkelee......dgqvegvtvviDlkglslskmlwkp.isllkkilk 90 
                 + +++++++h++D +grpv++ +lg++d k   +++  e++++ lv+ +e l+++  +      +g +e+ + ++Dlkg+++  +   + +s++++ + 
  EPX74459.1  98 VSKYYPQYYHKTDIDGRPVYIEQLGNVDLKklyQITtTERMLQNLVYEYEMLALKRFPacsrkyNGLIETSCTIMDLKGVGITSIH--SvYSYIRQASS 194
                 5789**************************999777789************9998888899999*****************88777..45********* PP

   CRAL_TRIO  91 ilqdnyperlgkilivnaPklfkfafklvkpfldektreKikfvspsnteatlekyidpeqlpkelGGt 159
                 i qd+yper+gk++++naP+ f+ af+l+k+ lde+t +Ki+++++ n +++l ++i++e lp++lGGt
  EPX74459.1 195 ISQDYYPERMGKFYLINAPWGFSSAFNLIKGYLDENTVKKIHVLGS-NYKSALLEQIPAEHLPASLGGT 262
                 ********************************************55.6679*****************7 PP

>> CRAL_TRIO_N  CRAL/TRIO, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.4   0.2   3.5e-13   2.1e-09      17      54 .]      37      73 ..      22      73 .. 0.75
   2 ?   -2.6   0.1       1.1   6.4e+03      19      27 ..     278     286 .]     271     286 .] 0.84

  Alignments for each domain:
  == domain 1  score: 37.4 bits;  conditional E-value: 3.5e-13
  CRAL_TRIO_N 17 teeekfWltredhddaclLRfLRArkwdvekAikrLed 54
                 +e +k+ +t+   dda+lLRfLRArk+++++A +++++
   EPX74459.1 37 SELKKMGYTLR-LDDATLLRFLRARKFNLQQALEMFVK 73
                 34445554444.689********************985 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.1
  CRAL_TRIO_N  19 eekfWltre 27 
                  +e+ W+++e
   EPX74459.1 278 HEEQWMSKE 286
                  7899*9998 PP

>> CRAL_TRIO_2  Divergent CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.1   6.8e+03      95     129 ..      69      82 ..      61     108 .. 0.54
   2 !   17.0   0.0   8.4e-07     0.005      54     132 ..     184     262 ..     126     266 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.1
  CRAL_TRIO_2  95 safvsskfrkkveyvsrleeLarkidrtqllkslP 129
                   +fv+s+ ++k                     +++
   EPX74459.1  69 EMFVKSEQWRK---------------------EFG 82 
                  44444444333.....................332 PP

  == domain 2  score: 17.0 bits;  conditional E-value: 8.4e-07
  CRAL_TRIO_2  54 pslswlkkvystlprrykknlkklyivhpstfvktllktvlsafvsskfrkkvey..vsrleeLarkidrtqllkslPegv 132
                   ++s+++++ s+ +  y+++  k+y++++ + + +++  +  ++ ++ + kk+++   ++ + L + i  ++l+ sl+ g+
   EPX74459.1 184 SVYSYIRQASSISQDYYPERMGKFYLINAPWGFSSAFNLIKGYLDENTV-KKIHVlgSNYKSALLEQIPAEHLPASLG-GT 262
                  589****************************999999666666655555.888883357789999*********9999.66 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2088.33
//
Query:       EPX74460.1  [L=707]
Description: poly(A) binding protein Nab3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-07   29.6   0.0    8.2e-07   28.8   0.0    1.5  1  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
  ------ inclusion threshold ------
      0.031   14.5   0.2       0.22   11.8   0.1    2.2  2  HopJ      HopJ type III effector protein


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.8   0.0   9.2e-11   8.2e-07       2      69 ..     345     407 ..     344     408 .. 0.88

  Alignments for each domain:
  == domain 1  score: 28.8 bits;  conditional E-value: 9.2e-11
                 EEESE..TTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   2 fVgnL..ppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 f+g L   ++++++e+ + F+++G+   + l +        ++fV+F + e+ ++Al+ ++gk +++++l
  EPX74460.1 345 FLGHLqkENNLSKREVWKTFQNYGRLAQVVLKP-------TYGFVQFFTDEACARALNDMQGKYIQNQRL 407
                 666666668899**************7777777.......6*************************9987 PP

>> HopJ  HopJ type III effector protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   2.5e-05      0.22      13      68 ..     213     267 ..     204     289 .. 0.79
   2 ?   -0.5   0.0      0.16   1.5e+03      50      76 ..     341     369 ..     334     379 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.5e-05
                 CG--HHHHHHHHHHHEEE----EEETTEEE-TTSSHHHHHHHHHHHHTT--HHHHH CS
        HopJ  13 esvefedvlavideaYeftptaFkNgeleneagenegsckifafakleelskeetL 68 
                 + ++ ++vla+++++ + +++aF+N +++++++en +s+ + ++++  ++s++ t+
  EPX74460.1 213 KGIDVNKVLATVNNNNRPSNVAFQNLNVQDRQSENTSSSSV-SLSHSPNFSESVTI 267
                 678999*****************************999876.67777777777665 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.16
                 HHHHH..HHHHHTT--HHHHHHHTTHHHH CS
        HopJ  50 sckif..afakleelskeetLalfgeyYr 76 
                 s+++f   ++k ++lsk+e  + f +y r
  EPX74460.1 341 SSRLFlgHLQKENNLSKREVWKTFQNYGR 369
                 6666633588999***********99976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (707 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       707  (0.0394333); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.24s 00:00:00.85 Elapsed: 00:00:00.41
# Mc/sec: 5141.36
//
Query:       EPX74461.1  [L=562]
Description: transcription factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-08   35.1  14.4    2.3e-08   34.0  14.4    1.6  1  Zn_clus   Fungal Zn(2)-Cys(6) binuclear cluster domain


Domain annotation for each model (and alignments):
>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.0  14.4   1.3e-12   2.3e-08       1      34 [.      15      46 ..      15      50 .. 0.92

  Alignments for each domain:
  == domain 1  score: 34.0 bits;  conditional E-value: 1.3e-12
                SS-HHHHHCT---STSSSS-HHHHHCTHHHCCCC CS
     Zn_clus  1 haCdnCrkkKvKCdakkPaCsnCkklnleCtfys 34
                ++C nCr++K KCd+++P Cs+Ck+++  C+ y 
  EPX74461.1 15 KSCLNCRRRKLKCDRQHP-CSRCKERSERCV-YA 46
                59****************.************.65 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (562 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       576  (0.0321267); expected 358.6 (0.02)
Passed bias filter:                      347  (0.0193541); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 3874.04
//
Query:       EPX74462.1  [L=171]
Description: prefoldin subunit 3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.3e-34  118.7   3.7    1.3e-34  118.7   3.7    1.8  2  Prefoldin    Prefoldin subunit
     0.0018   18.2   7.3      0.002   18.0   3.7    2.3  2  Prefoldin_2  Prefoldin subunit
  ------ inclusion threshold ------
      0.063   13.6   3.9        1.3    9.3   3.7    2.2  1  THOC7        Tho complex subunit 7
      0.093   13.0   2.1       0.87    9.9   0.2    2.1  2  DUF5082      Domain of unknown function (DUF5082)


Domain annotation for each model (and alignments):
>> Prefoldin  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.1      0.16   7.4e+02      84     101 ..      20      37 ..      15      38 .. 0.70
   2 !  118.7   3.7   2.9e-38   1.3e-34       1     120 []      39     159 ..      39     159 .. 0.99

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.16
                 HHHHHHHHHHHHHHHHHH CS
   Prefoldin  84 kkleelekqlekleeele 101
                   +e++++ lek++e+++
  EPX74462.1  20 LSMEDAQNHLEKFQEAIA 37 
                 457788888888888876 PP

  == domain 2  score: 118.7 bits;  conditional E-value: 2.9e-38
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT..-TT-EEEEEEETTEEEEEE--STTEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH CS
   Prefoldin   1 lkeeleslqaelaqlkeaieelektletlktlkk.edegkevlvplgaglyvkaevkdtdkvlvdlGagyyveksleeAiellkkkleelekqleklee 98 
                 +k++++s+ +++a l+++i++++ktl+t++ +kk ++e+ +vl++l+++ly+kaev+  +kv+++lGa++++e+s+eeA++ll +kl+ +++++ +++e
  EPX74462.1  39 YKFMETSIVRRVAGLDDKIPDITKTLQTVQFMKKkKGESFNVLYELNDTLYTKAEVEASEKVYLWLGANVMLEYSVEEAETLLTQKLNAAQETMMVCKE 137
                 89************************************************************************************************* PP

                 HHHHHHHHHHHHHHHHHHHHHH CS
   Prefoldin  99 eleklkdqittleanlaqlyqk 120
                 +le+l++qitt+e+n a++y++
  EPX74462.1 138 DLEFLRAQITTMEVNTARVYNH 159
                 ********************95 PP

>> Prefoldin_2  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.1     0.086   3.9e+02      61      74 ..      23      36 ..      14      57 .. 0.65
   2 !   18.0   3.7   4.5e-07     0.002      13      98 ..      66     152 ..      55     158 .. 0.83

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.086
                 HHHHHHHHHHHHHH CS
  Prefoldin_2 61 eevkeeLeerketl 74
                 e+++++Le+ +e +
   EPX74462.1 23 EDAQNHLEKFQEAI 36
                 33444444433333 PP

  == domain 2  score: 18.0 bits;  conditional E-value: 4.5e-07
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHS-TT--EEEEET.TEEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Prefoldin_2  13 qlqqlaqqikqletqlkelelvleelelldedtkvyklvG.dvlvkqdkeevkeeLeerketlekeiktlekqleklekeleelkee 98 
                  ++q +++++ +  + l el+++l +  +++ ++kvy   G +v+++ ++ee+++ L ++++ +++ +  +++ le l+++++ ++ +
   EPX74462.1  66 TVQFMKKKKGESFNVLYELNDTLYTKAEVEASEKVYLWLGaNVMLEYSVEEAETLLTQKLNAAQETMMVCKEDLEFLRAQITTMEVN 152
                  4444444555555567789999999999***********96799*************************************999876 PP

>> THOC7  Tho complex subunit 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   3.7   0.00029       1.3      41      88 ..      21      68 ..      15     151 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00029
       THOC7 41 lkedllldfaafelsierlqllakanerereryeaekeeieseieavr 88
                  ed++  +++f+ +i+++++ +++  r ++ ++++  +i ++++ v+
  EPX74462.1 21 SMEDAQNHLEKFQEAIAKYKFMETSIVRRVAGLDDKIPDITKTLQTVQ 68
                457777788888888888888888888888777777777776666554 PP

>> DUF5082  Domain of unknown function (DUF5082)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.2   0.00019      0.87      11      73 ..      21      83 ..      17      99 .. 0.86
   2 ?    3.1   0.1     0.025   1.1e+02      28      56 ..     124     152 ..     110     170 .. 0.59

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00019
     DUF5082 11 qiaelrseiaaleekIerLkeaktklsdekeslkqkkkklekplnssesWkGkeennydgirs 73
                 ++++++ +++ +e I++ k + t+++   + l++k+ +++k+l + +  k+k+ ++++  ++
  EPX74462.1 21 SMEDAQNHLEKFQEAIAKYKFMETSIVRRVAGLDDKIPDITKTLQTVQFMKKKKGESFNVLYE 83
                699******************************************999999998888876666 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.025
     DUF5082  28 rLkeaktklsdekeslkqkkkklekplns 56 
                 +L +a ++++  ke l+  + ++++++++
  EPX74462.1 124 KLNAAQETMMVCKEDLEFLRAQITTMEVN 152
                 34455555555555555555555555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1031  (0.0575046); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.39u 0.27s 00:00:00.66 Elapsed: 00:00:00.41
# Mc/sec: 1255.06
//
Query:       EPX74463.1  [L=422]
Description: inositol phosphorylceramide synthase Aur1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.4e-26   90.7  12.1    9.4e-26   90.7  12.1    2.1  2  PAP2_3    PAP2 superfamily
    7.3e-09   35.5   4.8    7.3e-09   35.5   4.8    2.6  3  PAP2      PAP2 superfamily


Domain annotation for each model (and alignments):
>> PAP2_3  PAP2 superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   2.4      0.18   1.6e+03      36      76 ..      40      80 ..      21     108 .. 0.75
   2 !   90.7  12.1   1.1e-29   9.4e-26      23     189 ..     139     311 ..     120     312 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.18
      PAP2_3 36 Yaslhfqvtllvlvllflrrrerlreflttlllatllgllv 76
                 +++h+q++ll+ vl+f+    ++  f   + ++ llg+++
  EPX74463.1 40 WSWIHLQYLLLLGVLAFCFAVVQFPGFWGKIGFTILLGTAL 80
                67888888888888888777777777766666666666665 PP

  == domain 2  score: 90.7 bits;  conditional E-value: 1.1e-29
      PAP2_3  23 lahpalavilala.Yaslhfqvtllvlvllf.lrrrerlreflttlllatllgllvyalfPaagPrlleeagfvdtvaaaslag...alrdgasravll 116
                 +++ ++ ++la+  Y ++h+ +++++ ++lf ++ +  l   ++t+ +++l+g+++ ++fP+ +P++ + +g++ +  + + +    a  d+ ++++++
  EPX74463.1 139 KSTHSILDVLAWLpYGVVHYSAPIIISFILFiFAPPGTLPVWARTFGYMNLTGVFIQMVFPCSPPWYEDMYGLTPATYSIRGSPgglARIDALFGTSTY 237
                 44455788888888***************************************************9886666666555555555788678888889999 PP

      PAP2_3 117 rgtienglaa...fPSlHvawallvalalwrlrrkrllrvlalllnvlmivatvatgnHYlvDviaGvalalvaia 189
                 +++++n+ +    fPSlH++wa+l al+l ++ +    r  + ++++++ ++t+++ +HY+vD+++G++la+ +++
  EPX74463.1 238 TTGFNNSPIVfgaFPSLHAGWAMLEALFLSHVFPAY--RFPFYFYVCWLCWCTMYLNHHYFVDLVGGMCLAFTCFV 311
                 9999999887788********************999..**********************************9997 PP

>> PAP2  PAP2 superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.7      0.25   2.2e+03      65      65 ..      72      72 ..      11     109 .. 0.65
   2 ?   -1.0   1.4      0.15   1.4e+03      24     107 ..     110     187 ..      88     191 .. 0.57
   3 !   35.5   4.8   8.1e-13   7.3e-09      50     130 ..     245     316 ..     211     321 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.25
        PAP2 65 f 65
                f
  EPX74463.1 72 F 72
                1 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.15
        PAP2  24 grpRPfflaeetkldtqvstletseskeakesf.PSgHs...afafalalllalllrrkrkkiglvllalillllavlvalsRlylgv 107
                 + +RP ++ +  ++ ++    ++s+    ++ +  S+Hs   + a++ + ++++  +  +++     +++i++   +l  ++R + ++
  EPX74463.1 110 EGWRPPIWVRVLPTLENIL--YGSNL---SDILsKSTHSildVLAWLPYGVVHYSAPIIISF-----ILFIFAPPGTLPVWARTFGYM 187
                 4577888777777777743..33322...222245666655566666666666666666666.....555555556666666666555 PP

  == domain 3  score: 35.5 bits;  conditional E-value: 8.1e-13
        PAP2  50 keakesfPSgHsafafalalllalllrrkrkkiglvllalillllavlvalsRlylgvHflsDvlaGlliGialaalayrl 130
                   ++  fPS H+  a++ al+l+++++  r++         +++++++ ++  +yl++H++ D+++G++++++++++a +l
  EPX74463.1 245 PIVFGAFPSLHAGWAMLEALFLSHVFPAYRFP---------FYFYVCWLCWCTMYLNHHYFVDLVGGMCLAFTCFVIAQKL 316
                 467889**************************.........999*****************************99988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (422 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       615  (0.034302); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 2886.61
//
Query:       EPX74464.1  [L=1053]
Description: E3 ubiquitin ligase complex subunit Mms1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-22   80.2   0.3    6.3e-22   77.9   0.0    2.2  3  MMS1_N    Mono-functional DNA-alkylating methyl methanesulfon
    7.8e-17   61.6   0.0    1.6e-16   60.5   0.0    1.5  1  CPSF_A    CPSF A subunit region


Domain annotation for each model (and alignments):
>> MMS1_N  Mono-functional DNA-alkylating methyl methanesulfonate N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.9   0.0     7e-26   6.3e-22       7     461 ..      82     526 ..      77     558 .. 0.71
   2 ?   -1.3   0.0      0.07   6.3e+02     344     382 ..     700     737 ..     693     738 .. 0.77
   3 ?   -4.0   0.0      0.46   4.1e+03     266     288 ..     844     866 ..     829     895 .. 0.59

  Alignments for each domain:
  == domain 1  score: 77.9 bits;  conditional E-value: 7e-26
      MMS1_N   7 sdsgelvfl..synpeknqfetvhs.hetlgksgsrrsqpGqylavDPkgraiavsayekvflvyslkkkeilnrealllssplea.rksegvilsmvF 101
                 +d g + +   + ++ +++f  ++   + + ++ s ++q+G+++ v P+  ++a+s++++ +l+y   +++ l+   ++   p  +  + eg+il+++F
  EPX74464.1  82 TDAGTCWTFqvKLQN-DGRFLIQRCnERYIDPTRSCEEQLGKNIDVCPNAPYLATSSFSGELLIY---SQSFLE---DK--TPTTIkLSLEGIILHSAF 171
                 666666666332222.223322222166778888999****************************...334454...22..3555547789******** PP

      MMS1_N 102 ldpgykeednpiialleqdrrgkteltlyewdlglnlvrkisktsepkk......nldsganlLiplpk.pgg.vlVcgetiitykdildqedirkk.. 190
                 l p+ ++ +  + ++l+ +++g+ ++++  w+ g   ++  + +++ +             +++ + p  p   +l  +++ ++   +    +i++   
  EPX74464.1 172 LFPKRSSLTCVTHVCLLLESNGTPRIVVHRWIHGISSSNG-TSYTSYSIpvpvefA---VVSHILACPDlPDHfLLLLENKLCLLSAS----QIECGdl 262
                 *****877755556666788999*********99885555.445555334543321...23477777776677444444444444333....3555555 PP

      MMS1_N 191 ...swarPrrekatn...fvawekldsfffllatedGdLylleiekdedsgkvvtsislkyf..dtvsvasalvilksgfLfvasefGdgqlyqiearg 281
                    + ++P+ + + +   + ++  +     +l  e+G L  + +  +      v s+  +y+  ++ +   +l+ +   +L++ ++  d  +y i+++ 
  EPX74464.1 263 kflQETLPTYH-SPAfplSLVIDPTVPNTCFLIYENGALVHVRF--S------VVSMDFFYMgyLNSPLGDCLLPF-YPYLLCCGDGYDTSVYDISSL- 350
                 66645567666.44434322556665577888899*********..2......67788888644888899999987.458*****************9. PP

      MMS1_N 282 eddknleliqtldNlaPilDfkvv...kes..dlasegq.dqiytcsGagkrgsLrelRsGieveela.vseepgspitgvWtlklssedeyddylvlS 373
                     n++l+ t+++++P+ Df+     ++   d  +e      y++sG g++g+L  lR+G +v+ l+  + ++g   +gv      s ++   y+ l 
  EPX74464.1 351 ----NPSLVTTMPSWSPMWDFVYTddfQNIllD--NEVLdNSCYAVSGIGESGALVKLRHGCSVSVLLeALMTEGALLKGVLG----SIEDSVFYVWLN 439
                 ....8****************998655333553..22332789*************************555555555555554....4456779***** PP

      MMS1_N 374 fvneTlvlsidgdgeveevtedsglllsvpTLaagnlgdgslvQVtpngirliradk..rvsewkppngksiiaaaangeqllvalsgre 461
                  + +Tlvl+++ dg+ve+++ +s  l ++ +L ++ +  ++++ Vt++ + ++  d   ++   + p+ +  i a+  ++ l v+ +++e
  EPX74464.1 440 YPWQTLVLRLQMDGTVEDIS-ESLALEDSLSLDVALIK-ETFLIVTDRLVYTLTPDVsqNI-LMQCPDAEDFILATHTQNMLYVVNKNKE 526
                 *******************9.885556888*******8.79999******76666654222.5566665666677777777766665544 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.07
      MMS1_N 344 vseepgspitgvWtlklssedeyddylvlSfvneTlvls 382
                 + e+ +++i g++ l++ + +++++ +v+ f n+Tl ls
  EPX74464.1 700 DVENLFHSIAGIYDLPK-NFQKNNSKIVVYFSNSTLYLS 737
                 456677899*******5.45567899*********9775 PP

  == domain 3  score: -4.0 bits;  conditional E-value: 0.46
      MMS1_N 266 asefGdgqlyqieargeddknle 288
                 +se+++g l++++ + +d +++e
  EPX74464.1 844 GSESNSGRLLILTMIANDSNKVE 866
                 55555555555555554442222 PP

>> CPSF_A  CPSF A subunit region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.5   0.0   1.8e-20   1.6e-16      19     260 ..     810    1049 ..     795    1051 .. 0.83

  Alignments for each domain:
  == domain 1  score: 60.5 bits;  conditional E-value: 1.8e-20
                  E--TTEEEEEEEE--B-SSTTT---B--EEEEEEE---SSS--E.EEEEEEEEEE-SS--EEEEEEEEEEEES----EEEETTE.EEEE-SSEEEEE CS
      CPSF_A   19 eLeenEavlsvksvelessettkekkellvVGtafnlgedpaarsGrilvfeiievpetnrkLklvhkeevkgavtalaefqGr.llvgvgqkvrvy 114 
                   +++nE   ++    + +s++  +k  +l+ Gt+++ +e    + Gr+l++++i + +++ +L+ v    + ++v++++ +++  l  +vg+ + + 
  EPX74464.1  810 VFKNNETLYAMHFWIIRDSKR--RKFRYLCLGTGITGSESN--S-GRLLILTMIANDSNKVELRSVITLSMPQPVYSVCSLENSgLCYSVGRRLGIK 901 
                  588999999999999998877..6678*********99955..6.***********99999********************6555999999997655 PP

                  ..EE-TTS-EEEEEEEE-SS-EEEEEEETTEEEEEESSS-EEEEEE-SSS--EEEEEEESS---EEEEEEE--SSSEEEEEETTSEEEEEE--TTSG CS
      CPSF_A  115 ..dlgedktLlrkafldtqlyvvslkvlgnriivgDlmkSvtfveydeenyklilfardtqkrwvtaaeflvdgedtvlvaDkfgnlfvlrydpeas 209 
                    dl+ +k   ++++  t   +vs+++ +n+i+ + l+ Sv+++ey +e ++l+l + d+++   +++  l+++ + + ++Dk++++++++y+ +  
  EPX74464.1  902 ilDLESKKFSNGECEVTTRSPIVSMHTYKNYIFTSSLRDSVSVFEYIKETNSLHLACNDISPALGIDCYYLPQE-KLLFGCDKEKHITCFKYEASLR 997 
                  11666666556788888888****************************8888*******************888.8*****************9999 PP

                  GGTTTT....EEEEEEEEE-SS----E...EEEE.SSS--S-EEEEEE-TTS-E CS
      CPSF_A  210 essdgdp...rleeraefhlgeivtslrkgslvpgeaesssspqllyatldGsi 260 
                  +s+  ++    l ++++  l +i+++l k  l+ ++ ++     ++ +t+ G i
  EPX74464.1  998 TSQHLQKlepILSRKSKRKLPSITNRL-KYGLLRRSDNQ-ELWGIVGGTIGGDI 1049
                  999998666677788888999999999.66666632222.23555666655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1053 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       509  (0.0283898); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.71u 0.30s 00:00:01.01 Elapsed: 00:00:00.44
# Mc/sec: 7214.08
//
Query:       EPX74465.1  [L=320]
Description: chromosome segregation protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      1e-23   83.6   0.8    3.5e-23   82.0   0.6    2.0  2  DUF4210         Domain of unknown function (DUF4210)
     0.0035   17.5   0.1     0.0083   16.3   0.1    1.7  1  Chromosome_seg  Chromosome segregation during meiosis


Domain annotation for each model (and alignments):
>> DUF4210  Domain of unknown function (DUF4210)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.0   0.6   3.9e-27   3.5e-23       1      68 []     126     192 ..     126     192 .. 0.99
   2 ?   -3.2   0.0       1.5   1.3e+04      18      34 ..     270     286 ..     267     292 .. 0.66

  Alignments for each domain:
  == domain 1  score: 82.0 bits;  conditional E-value: 3.9e-27
     DUF4210   1 lvgsfeeSlLsgrmstlpskpleFvaeiGvlgsgkcksslrcPkhlklpfsavfysledsdksssPYv 68 
                 +vgs+ee l++++m+ +ps+ l+Fv++iGv++++kc ssl cP+h k++f + +y ++dsd++ sPYv
  EPX74465.1 126 FVGSYEETLFNCKMPLNPSQYLPFVVDIGVISRCKCLSSLVCPPHFKMRFWSAYYITDDSDFQ-SPYV 192
                 79************************************************************7.***8 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.5
     DUF4210  18 pskpleFvaeiGvlgsg 34 
                 +sk l++ +++ v +s+
  EPX74465.1 270 SSKHLKYGVHLQVRSSF 286
                 56667777777666666 PP

>> Chromosome_seg  Chromosome segregation during meiosis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.1   9.3e-07    0.0083       2      30 ..     274     302 ..     273     319 .. 0.89

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 9.3e-07
  Chromosome_seg   2 LRYaiHLrflcpksgRiYLykdiRvVFar 30 
                     L+Y +HL++ ++  + ++L+   Rv+F+ 
      EPX74465.1 274 LKYGVHLQVRSSFDNQYFLHGVQRVIFSS 302
                     89*************************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       442  (0.0246528); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2380.18
//
Query:       EPX74466.1  [L=104]
Description: ribosomal protein subunit Img2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-24   85.5   0.0    2.7e-24   85.3   0.0    1.1  1  Img2      Mitochondrial large subunit ribosomal protein (Img2
     0.0055   17.2   0.2     0.0097   16.4   0.2    1.4  1  SUI1      Translation initiation factor SUI1


Domain annotation for each model (and alignments):
>> Img2  Mitochondrial large subunit ribosomal protein (Img2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.3   0.0     3e-28   2.7e-24       1      80 []      22     104 .]      22     104 .] 0.96

  Alignments for each domain:
  == domain 1  score: 85.3 bits;  conditional E-value: 3e-28
        Img2   1 lpYfvrRtrsgslPVYtdvkrggtkkltvirkieGDiaalredLrkaleel....vkvnevtgkieikGdrveevkkfLeskgF 80 
                 lp+ ++R+++ + PVY d+k+gg++ +t+ir+ieGD +al ++L ++l+ +    +++n+ t++i+ikG+++++vk+++++ gF
  EPX74466.1  22 LPFAISRSKTANYPVYIDYKSGGNQVQTIIRRIEGDDNALLKELISDLA-IpkadASINRLTKQIVIKGNHSQRVKQWIQDHGF 104
                 69***********************************************.445569***************************9 PP

>> SUI1  Translation initiation factor SUI1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.2   1.1e-06    0.0097      12      76 ..      42     104 .]      35     104 .] 0.75

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 1.1e-06
        SUI1  12 rggrKkvTtvsgleaf.gidlkklakelkkkfacsgsvvkdggeeiqvQGdqrkkvaelLtekygv 76 
                  gg+ + T+++ +e + +  lk+l ++l     + +s+++   ++i++ G+++++v+++++++ g+
  EPX74466.1  42 SGGNQVQTIIRRIEGDdNALLKELISDLAIP-KADASINRLT-KQIVIKGNHSQRVKQWIQDH-GF 104
                 4679999999999877455588888888863.3455664433.69***************998.75 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       674  (0.0375927); expected 358.6 (0.02)
Passed bias filter:                      568  (0.0316805); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 776.10
//
Query:       EPX74467.1  [L=447]
Description: sec14 cytosolic factor family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.3e-46  155.8   0.0    1.4e-45  154.9   0.0    1.4  1  CRAL_TRIO    CRAL/TRIO domain
    6.1e-12   45.5   0.6      3e-11   43.3   0.6    2.2  1  CRAL_TRIO_N  CRAL/TRIO, N-terminal domain
    7.7e-09   35.8   0.0    1.8e-08   34.7   0.0    1.6  1  CRAL_TRIO_2  Divergent CRAL/TRIO domain


Domain annotation for each model (and alignments):
>> CRAL_TRIO  CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  154.9   0.0   2.3e-49   1.4e-45       5     158 ..     179     324 ..     176     325 .. 0.96

  Alignments for each domain:
  == domain 1  score: 154.9 bits;  conditional E-value: 2.3e-49
   CRAL_TRIO   5 eggkvgihgrDkegrpvlylrlgrfdpkklsleelvralvlvlerllkeleedgqvegvtvviDlkglslskmlwkpisllkkilkilqdnyperlgki 103
                 + gk++i g Dk++rpv+y+r++ ++  ++s e + r++v+v+e++ + l++  ++e++t+v+D++++sls+m+   ++ lk+++k+++++ype+lg++
  EPX74467.1 179 RIGKCFIFGEDKKNRPVCYIRARLHKAGDVSPESVERLTVWVMETARLILKP--PIETATIVFDMTDFSLSNMD---YGPLKFMIKCFEAHYPECLGEC 272
                 669********************************************88888..********************...********************** PP

   CRAL_TRIO 104 livnaPklfkfafklvkpfldektreKikfvspsnteatlekyidpeqlpkelGG 158
                 ++++aP+lf+ +++++k++ld+++++Kikf+ + +   +l++yi ++++ ke+GG
  EPX74467.1 273 IVHKAPWLFQGIWSFIKSWLDPVVASKIKFTRNVK---DLQQYIKADSILKEFGG 324
                 *******************************6655...5**************** PP

>> CRAL_TRIO_N  CRAL/TRIO, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.3   0.6     5e-15     3e-11      11      54 .]     104     147 ..      96     147 .. 0.86

  Alignments for each domain:
  == domain 1  score: 43.3 bits;  conditional E-value: 5e-15
  CRAL_TRIO_N  11 eseyklteeekfW.ltredhddaclLRfLRArkwdvekAikrLed 54 
                  e++++ + +  fW     d +d +lLRfLRArkw+ve+A +++++
   EPX74467.1 104 EWDPE-ELRLAFWdTVNCDDPDGLLLRFLRARKWNVEAALEMFIK 147
                  66666.667789*77788************************975 PP

>> CRAL_TRIO_2  Divergent CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.7   0.0   2.9e-12   1.8e-08       2     130 ..     193     324 ..     192     335 .. 0.90

  Alignments for each domain:
  == domain 1  score: 34.7 bits;  conditional E-value: 2.9e-12
  CRAL_TRIO_2   2 rpVfvfiaafl...lsskadldkllryvlhtladkivgke...yvlVyfhtglssenkpslswlkkvystlprrykknlkklyivhpstfvktllktv 93 
                  rpV +++a+       s ++ ++l   v++t  + i +++    ++V+++t++s  ++++++ lk ++++++ +y++ l + +++ + + ++ +  ++
   EPX74467.1 193 RPVCYIRARLHkagDVSPESVERLTVWVMETA-RLILKPPietATIVFDMTDFS-LSNMDYGPLKFMIKCFEAHYPECLGECIVHKAPWLFQGIW-SF 287
                  8999999999977766778***********99.88888889999*********9.6*************************99988888888888.88 PP

  CRAL_TRIO_2  94 lsafvsskfrkkveyvsrleeLarkidrtqllkslPe 130
                   + ++ + +  k+ +  ++++L+++i+ + +lk++++
   EPX74467.1 288 IKSWLDPVVASKIKFTRNVKDLQQYIKADSILKEFGG 324
                  899999999**************************93 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (447 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       571  (0.0318478); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 3244.85
//
Query:       EPX74468.1  [L=569]
Description: pyruvate decarboxylase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      3e-32  111.6   0.0    5.2e-32  110.8   0.0    1.3  1  TPP_enzyme_N    Thiamine pyrophosphate enzyme, N-terminal TPP
    1.5e-20   73.3   0.0      3e-20   72.4   0.0    1.5  1  TPP_enzyme_M    Thiamine pyrophosphate enzyme, central domain
    3.8e-15   56.0   0.0    1.2e-14   54.4   0.0    1.9  3  TPP_enzyme_C    Thiamine pyrophosphate enzyme, C-terminal TPP
  ------ inclusion threshold ------
      0.022   14.0   0.0      0.038   13.2   0.0    1.3  1  DXP_synthase_N  1-deoxy-D-xylulose-5-phosphate synthase


Domain annotation for each model (and alignments):
>> TPP_enzyme_N  Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.8   0.0   1.2e-35   5.2e-32       3     169 ..       7     180 ..       6     183 .. 0.93

  Alignments for each domain:
  == domain 1  score: 110.8 bits;  conditional E-value: 1.2e-35
                   HHHHHHHHHHHCT--EEEE---CCCHHHHCCHHCT...TSEEEE-SSHHHHHHHHHHHHHHHTS-EEEEE-CHHHHHHCHHHHHHHHHHT--EEEEE CS
  TPP_enzyme_N   3 vaealvraLkalgvehvfgvpGsrilplldalseeq..girvvlarhEqgaafaAdgyaratgkpgvvlvtsgpGatnaltalaeAkvdriPllvls 97 
                   v+e+l++++++lgv+++ gvpG+ +l lld +++    ++r+v   +E + a+ Adgyar++g + ++++t g+G ++a+++la+A+++++P+++++
    EPX74468.1   7 VGEYLFERIRQLGVKSIQGVPGDFNLTLLDLIENVGdeSFRWVGNTNELNGAYSADGYARVKG-LSAIVTTFGVGELSAINGLAGAYSEHVPIVHIV 102
                   799******************************99999***********************97.9999***************************** PP

                   EE--CCCHH.....S..TC--T..-CCHHHCCCSSEEEE-SSGGGHHHHHHHHHHHHHSSS--EEEEEEEHHHCC-EEE CS
  TPP_enzyme_N  98 gdrptslrg.....qgvlqqel..dqlalfrpvtkyaervtspeelpealrrAirtalsgrpgPvylelpkdvlleevd 169
                   g ++t+ ++     +++l +      +++ rpv  y++ +t+ e++ +++++A++++ +++ +Pvy+ +p+d   +++ 
    EPX74468.1 103 GMPSTKAQRtgallHHTLGNGDfgIFVEMNRPVSAYTTVITDGENASKVIDEALTIC-YRKARPVYIGVPADAGYFKTS 180
                   *********77776666664446668899****************************.**************9877766 PP

>> TPP_enzyme_M  Thiamine pyrophosphate enzyme, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.4   0.0   6.6e-24     3e-20       3     135 ..     206     338 ..     204     340 .. 0.91

  Alignments for each domain:
  == domain 1  score: 72.4 bits;  conditional E-value: 6.6e-24
                   HHHHHHHH-SSEEEEE-CHHCHTTGHHHHHHHHHHHT-EEEEEGGGTTSS-TTSTTEEE.ESGGGSCHHHHHHHHH-SEEEEES-SSSTCCCTTTTT CS
  TPP_enzyme_M   3 kaaellkaakrpvilvGggvarsgaseelrelaeklgiPvvttlmgkgvipedhplylg.mlglhgskaanealeeaDlvlalGarfddirttgsep 98 
                    +++++++ak+pvilv+  ++r+++  e+++l e +++P   t+mgk++++e+++++ g ++g ++++ ++e +e++Dl+l +Ga  +d++ tgs++
    EPX74468.1 206 TIVDMIEKAKKPVILVDACAIRHRVVPEVKQLMELTRFPSYVTPMGKSALDETSKYFDGvYVGSISDPDVKERIESTDLLLSFGALKSDFN-TGSFS 301
                   789******************************************************999*****************************55.56566 PP

                   .TTTTT-EEEEEESSCCCCTTCC--SEEEECTHHHHHH CS
  TPP_enzyme_M  99 .efapeakiihididpaeigknyqvdlaivgdvketle 135
                    +  ++++ i++++d+  i  +y +d+++   +++ l+
    EPX74468.1 302 yHL-SQQNSIEFHSDHMIIRYAYYPDVSMKYVIRKLLN 338
                   344.44589******************99888877776 PP

>> TPP_enzyme_C  Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       2.2   9.8e+03      62      79 ..      85     102 ..      77     103 .. 0.81
   2 ?   -3.1   0.0       1.3   5.9e+03      53     151 ..     142     168 ..     125     176 .. 0.56
   3 !   54.4   0.0   2.6e-18   1.2e-14      16     141 ..     406     531 ..     392     545 .. 0.79

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 2.2
                   GGGHHHHHHTT-SEEEEE CS
  TPP_enzyme_C  62 lqelatavrrnlpitvvv 79 
                   ++ la a  +++pi+++v
    EPX74468.1  85 INGLAGAYSEHVPIVHIV 102
                   778888999999999987 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 1.3
                   EEHHHHHHT.GGGHHHHHHTT-SEEEEEEE-SBCCCHHHHHHHHTCCTTTTSBB.BS----HHHHHHHTTSEEEEESSH.HHHHHHHHHHHHCSSSE CS
  TPP_enzyme_C  53 vGDGgflmi.lqelatavrrnlpitvvvlnNegygmtggqqepfggkrksgpagkdlkpvdfaklaealGakgarvekadveeleealkealekkgp 148
                   + DG  +   + e  t+++r++                                                                         +p
    EPX74468.1 142 ITDGENASKvIDEALTICYRKA-------------------------------------------------------------------------RP 165
                   4444444444555555555554.........................................................................44 PP

                   EEE CS
  TPP_enzyme_C 149 ali 151
                   ++i
    EPX74468.1 166 VYI 168
                   433 PP

  == domain 3  score: 54.4 bits;  conditional E-value: 2.6e-18
                   SSSSEEECETTTS-TTTHHHHHHHHHH.....HSTTSEEEEEEEHHHHHHTGGGHHHHHHTT-SEEEEEEE-SBCCCHHHHHHHHTCCTTTTSBB.B CS
  TPP_enzyme_C  16 krprsyltsgglgtmGyglpaAiGakl.....akpdrevvaivGDGgflmilqelatavrrnlpitvvvlnNegygmtggqqepfggkrksgpagkd 107
                    +  + +++ ++g++Gy+++a  Ga+l      +p+r+ + +vGDG++  +++e++t++r+nl+ +++v+nN gy   +  +  + g +  +     
    EPX74468.1 406 PPDVTAISQVLWGSIGYSVGAFFGAALgvrdsDEPNRRTILVVGDGSLHLTVTEISTCIRQNLKPIIFVINNDGYTIERLIHGLHAGYNDIN----- 497
                   445556678899***************765443899***************************************99999988887755554..... PP

                   S----HHHHHHHTTSE.EEEESSH.HHHHHHHHHH CS
  TPP_enzyme_C 108 lkpvdfaklaealGak.garvekadveeleealke 141
                    ++ ++  l + +Gak   ++++++++++e+ + +
    EPX74468.1 498 -TQWQYQDLLKFFGAKqSRSYRVKTPQDVEKLFND 531
                   .5578888888888887775555555999988765 PP

>> DXP_synthase_N  1-deoxy-D-xylulose-5-phosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   8.6e-06     0.038     116     203 ..     423     510 ..     415     542 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 8.6e-06
  DXP_synthase_N 116 sisaalGlava.rdlkgekkkvvaviGDgaltgGmafealnnigelkkkllvilNdNemsisknvGalskylskllsskayeklkkevk 203
                     s+ a  G a   rd ++ +++++ v+GDg+l   +  e    i ++ k ++ ++N+   +i++ + +l++  +++ ++ +y++l k + 
      EPX74468.1 423 SVGAFFGAALGvRDSDEPNRRTILVVGDGSLHLTV-TEISTCIRQNLKPIIFVINNDGYTIERLIHGLHAGYNDINTQWQYQDLLKFFG 510
                     55666666666345555799***********9755.4666778888899******************************9999877554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (569 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       367  (0.0204696); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.23s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 4307.63
//
Query:       EPX74469.1  [L=520]
Description: peptidase family M17 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     5e-108  361.0   0.1   6.3e-108  360.7   0.1    1.1  1  Peptidase_M17    Cytosol aminopeptidase family, catalytic dom
     0.0092   15.8   0.0       0.02   14.7   0.0    1.6  1  Peptidase_M17_N  Cytosol aminopeptidase family, N-terminal do
  ------ inclusion threshold ------
       0.39   11.1   1.3        2.3    8.7   0.1    2.3  2  Transp_Tc5_C     Tc5 transposase C-terminal domain


Domain annotation for each model (and alignments):
>> Peptidase_M17  Cytosol aminopeptidase family, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  360.7   0.1  1.1e-111  6.3e-108       1     310 [.     197     513 ..     197     514 .. 0.93

  Alignments for each domain:
  == domain 1  score: 360.7 bits;  conditional E-value: 1.1e-111
                    HHHHHHHHS-TTTS-HHHHHHHHHHHHTCCTEEEEEEEECHHHHHTT-HHHHHHHTTSSSS--EEEEEEEE-SS......TTSEEEEEEEEEEEEE CS
  Peptidase_M17   1 nlardlvntpaneltpeklaeeaeelakeagkvevevldeeeleekgmgallaVgkgSeeepprlveleykgak......ekekklalVGKGitfD 90 
                    n+ar+l++ pan+lt+ ++++ a+el k+  +v+ve++de+++ e++m++ll+V++gS+  ppr++e++y+ga+      ++e+ l lVGKGitfD
     EPX74469.1 197 NMARSLMECPANYLTSIEFCNFAKELFKDCPNVDVEIHDEKWIDEQRMNGLLSVNAGSD-IPPRFLEIKYRGAAnsadksAAEEWLGLVGKGITFD 291
                    68**********************98788888**************************5.6***********997655555555566********* PP

                    E-TTSS--HHHHTTGGGGGHHHHHHHHHHHHHHHHT-SSEEEEEEEEEEE--STTSTTTTEEEE-TTS-EEEES-TTGCHHHHHHHHHHHHHGCT- CS
  Peptidase_M17  91 tGGlslKpsasmeemkaDmgGAAavlgalkavaelklpvnvvavlplaeNmisgkavkpgdvitamnGktvevlnTDaEGRLvLADalayaeekek 186
                    +GG+s+Kps +m+em+aDmgGAA++l+a+ a+++l++p+n v+v+pl+eN++sg+avkpgd+i ++nG ++ev+nTDaEGRLvLADa++y++++++
     EPX74469.1 292 AGGISIKPSMNMKEMRADMGGAAVMLSAIYAMSQLSMPINTVFVTPLTENLPSGSAVKPGDIIFMRNGLSIEVDNTDAEGRLVLADAVHYVTSNYS 387
                    *******************************************************************************************9999* PP

                    -SEEEEEE---THHHHHHTTTSEEEEES-HHHHHHHHHHHHHHS-EEEE----HHHGGGG-.-SSSSEESS-SSSSTHHHHHHHHHHTTS.SE.CG CS
  Peptidase_M17 187 pdlivdvATLTgavvvalGkkaaglfsnddelaeelekageeagervwrlpleeeykkqlk.skvaDlknvgkkrragaitAalFLkefv.ke.tp 279
                     +++++++TLTga+ valG+ ++g+f + +el+++le+++e+a + +wr+p+++ y kql+ s+ aDl+nv++ + +ga++Aa+F+k f+ k+ ++
     EPX74469.1 388 TKAVLEASTLTGAMLVALGNVYTGAFVQGEELWKNLEASAETADDLFWRMPFHDAYLKQLTgSSNADLCNVNRASGGGACVAAAFIKCFLaKKdVS 483
                    *****************************************************99****998899********8888*************633588 PP

                    EEEEE-TTTTES.BTTB.S...EE--TTHHHH CS
  Peptidase_M17 280 WaHlDiagtalkekealkke.kgatGvgvrtL 310
                    +aHlDiag++ k+ +      +g++G++vrt+
     EPX74469.1 484 FAHLDIAGVMDKKLN-AW-DcDGMSGRPVRTI 513
                    *********954433.33.249********98 PP

>> Peptidase_M17_N  Cytosol aminopeptidase family, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   3.4e-06      0.02      41     119 ..      67     134 ..      59     139 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 3.4e-06
  Peptidase_M17_N  41 vlvlralsgekakrvllVGLGkeeeltaealrkaagaaaralkgakvttiavalplegknsdekaeaaaegallglYrf 119
                      v++++++ g  + r+++V L  ++ +t++++r aa+ a r lk+ ++++iav+ +       ++ + aa + +l+++ f
       EPX74469.1  67 VRLFWNVHG--YTRLAIVQL--SDQITEKSIRTAAAEASRLLKSNGAKSIAVDGM-------GFPKDAALASALATFDF 134
                      555555554..466666666..56699****************************.......88888888888888777 PP

>> Transp_Tc5_C  Tc5 transposase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.1      0.13   7.8e+02      10      31 ..     205     227 ..     199     232 .. 0.85
   2 ?    8.7   0.1   0.00038       2.3      34      57 ..     466     489 ..     448     492 .. 0.87

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.13
  Transp_Tc5_C  10 reeeFktPaeyc.fgektsedCk 31 
                    ++++ t +e+c f ++  +dC 
    EPX74469.1 205 CPANYLTSIEFCnFAKELFKDCP 227
                   57889999****99999999995 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00038
  Transp_Tc5_C  34 gCselafikCarCkellCFdHfvv 57 
                    C   afikC   k+ + F H+ +
    EPX74469.1 466 ACVAAAFIKCFLAKKDVSFAHLDI 489
                   5999*****************955 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (520 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       519  (0.0289475); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.30s 00:00:00.88 Elapsed: 00:00:00.46
# Mc/sec: 3389.12
//
Query:       EPX74470.1  [L=447]
Description: SAGA complex ubiquitin carboxy terminal hydrolase Ubp8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.1e-52  177.2   4.3    6.1e-52  176.7   4.3    1.3  1  UCH       Ubiquitin carboxyl-terminal hydrolase
    4.7e-17   62.6   9.3    4.7e-17   62.6   9.3    2.8  2  UCH_1     Ubiquitin carboxyl-terminal hydrolase
    1.5e-10   41.2  11.5    1.5e-10   41.2  11.5    2.9  4  zf-UBP    Zn-finger in ubiquitin-hydrolases and other protein


Domain annotation for each model (and alignments):
>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  176.7   4.3     1e-55   6.1e-52       2     257 .]     146     432 ..     145     432 .. 0.93

  Alignments for each domain:
  == domain 1  score: 176.7 bits;  conditional E-value: 1e-55
                 EES-SSSTHHHHHHHHHHHTSHHHHHHHHTCHHCCSSTCCCCC-.TT.TTS.TTHHHHHHHHHHHHHH..SH-CCEE--HHHHHHHHHHSGGGTSSSTC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH   2 GlsNlGntCymnsvlQcLfsipelrdyllsleevkkesrnkkelnesnplgkkgelakalkdlfkell..kskskavsPkklkktlsklaksfsgykqq 98 
                 G++NlG+tC+m+ +lQ+ ++ p lr+++ls  +++++ + + ++           + +a+ ++f++++  k+k++ + P+ +++ + kl+ks+sgy+qq
  EPX74470.1 146 GIQNLGATCFMSVILQSTLHNPLLRNLFLSGFHTSENCKRS-SC-----------MTCAIDNMFASIYasKEKTSFYGPTVILNLMWKLSKSLSGYSQQ 232
                 9*****************************76666665544.33...........9************99889999*********************** PP

                 EHHHHHHHHHHHHHHHHCCHCCCHHHHHHCCCTTSHHHHHH-EEEEE.................................................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.................................................... RF
         UCH  99 DaqEflaflLdqlhedlnrevaeekwkkhlkrndslitdlfegqlks.................................................... 145
                 D +Efl +lLdq+h+++          +++   +++i+++f g++k+                                                    
  EPX74470.1 233 DGHEFLVYLLDQMHSESGG--------DNSFPCNCPIHKIFSGSMKNvitccecktkkvatdplmevsldlhessiqgcleryispeqiqytcsncnak 323
                 ******************9........7889999***************************************************************** PP

                 ....EEEEEEB-SEEEEEEESEEETEE..EEE--SEEB--SEEE-GGGBSS-BTTS-TCS-BEEEEEEEEEESCTTSEEEEEEEECTTTTEEEEEETTE CS
                 ....xxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH 146 ....klklkrlPeiLiihlkRfsynss..ksKlntkvefpeeldlssylaeekkkkteekkkYeLiavvvHsGslssGHYvayiknekngkWykydDet 238
                     +l +++lP++L+++lkRf+ ns   ++K ++ +++p  l+++  ++       +++ +Y+L+a+v+H+G+l+ GHY+ay+    +  Wy +dD+t
  EPX74470.1 324 vatkQLFFDKLPPTLCLQLKRFEQNSFamSTKVDKLITYPMLLKMQYNFN-------QDSVDYQLYAIVCHKGTLDTGHYIAYTL--FQDHWYLLDDTT 413
                 **************************9******************97666.......23456***********************..6778******** PP

                 EEEE-HHCCCTTCEEEEEE CS
                 xxxxxxxxxxxxxxxxxxx RF
         UCH 239 vkevkeeeevlssayiLfY 257
                 ++ v e+e ++++ay+LfY
  EPX74470.1 414 ITVVPESEVMKTQAYLLFY 432
                 *****9955555******* PP

>> UCH_1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   1.1      0.29   1.7e+03     145     163 ..      38      56 ..      12     125 .. 0.56
   2 !   62.6   9.3   7.8e-21   4.7e-17       2     320 .]     146     414 ..     145     414 .. 0.78

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.29
                 xxxxxxxxxxxxxxxxxxx RF
       UCH_1 145 clkCgseksrksstlvldl 163
                 c+ C++ ++r+ + l ++ 
  EPX74470.1  38 CRVCRKSNKRTLHCLECEF 56 
                 3334444444444444433 PP

  == domain 2  score: 62.6 bits;  conditional E-value: 7.8e-21
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1   2 GLEnhivnsYlNslLQvlyfipplrnlals..hlakeckkehcLlcElgflfdmldkak..glncqasnFlralssipeasalglileeeeetekssai 96 
                 G  n  +++++  +LQ   + p+lrnl ls  h++++ck+ +c+ c    +f     +k  ++    +  l+ + +++  ++l  + +++         
  EPX74470.1 146 GIQNLGATCFMSVILQSTLHNPLLRNLFLSgfHTSENCKRSSCMTCAIDNMFASIYASKekTSFYGPTVILNLMWKLS--KSLSGYSQQD------G-- 234
                 6777889******************98885449999**************9966665552144666777777777666..5555542332......1.. PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1  97 slssliqsfnrflldqlekelketkknsseeesaieqllgtkaettirclkCgseksrksstlvldlkyPkpsnekkeakvtfasilksslerekttra 195
                        +f  +lldq+++e+   +  s + + +i+++++ +++++i+c +C+++k+ ++ ++ ++l           ++++++ +l++ ++  +++++
  EPX74470.1 235 ------HEFLVYLLDQMHSESGGDN--SFPCNCPIHKIFSGSMKNVITCCECKTKKVATDPLMEVSLD---------LHESSIQGCLERYISP-EQIQY 315
                 ......2499**********88855..5788999******************************9993.........45689***********.8999* PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 196 wCekCkryqpteqrktvknlPpvLalnakleeeeelelwktknwlpleiklsldedknleeklkeerekakaekeikvYeLqsvvvhigdskesghLvs 294
                 +C++C+ +   +++  + +lPp L+l++k++e++             ++++s++ dk   +     + + + +++++ Y+L ++v+h g + + gh+++
  EPX74470.1 316 TCSNCNAKV-ATKQLFFDKLPPTLCLQLKRFEQN-------------SFAMSTKVDKLI-TYPMLLKMQYNFNQDSVDYQLYAIVCHKG-TLDTGHYIA 398
                 *****9955.5567899************98777.............333322223322.2222222334467889*************.666****** PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 295 lvkvaekelerdppesqWylFNDflV 320
                 +             +++Wyl++D  +
  EPX74470.1 399 YTLF----------QDHWYLLDDTTI 414
                 **97..........468******876 PP

>> zf-UBP  Zn-finger in ubiquitin-hydrolases and other protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.2  11.5   2.6e-14   1.5e-10       1      62 [.      38      97 ..      38      99 .. 0.96
   2 ?   -4.3   0.5         3   1.8e+04      14      18 ..     275     279 ..     268     283 .. 0.61
   3 ?   -1.9   0.1      0.73   4.4e+03      52      60 ..     317     325 ..     307     331 .. 0.61
   4 ?   -3.3   0.0         2   1.2e+04      27      44 ..     393     410 ..     382     416 .. 0.55

  Alignments for each domain:
  == domain 1  score: 41.2 bits;  conditional E-value: 2.6e-14
                -TTTH--.SSEEEETTT--EEE-TTTT-HHHHHHHHH---EEEETTT--EEETTTTEEBE-G CS
      zf-UBP  1 CseCnsenknlWlCLkCghvgCgrksnghalkHyeetrHplavdlstlsvycyscddevedk 62
                C +C+++nk+   CL+C + gC     +h  +H++e++H +  dl++ ++ycysc+d+v+++
  EPX74470.1 38 CRVCRKSNKRTLHCLECEFTGCLW--DEHFEQHVKESNHLFGADLKNSHLYCYSCKDYVYHP 97
                9****88999999**********8..8*********************************97 PP

  == domain 2  score: -4.3 bits;  conditional E-value: 3
                 ETTT- CS
      zf-UBP  14 CLkCg 18 
                 C +C 
  EPX74470.1 275 CCECK 279
                 55553 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 0.73
                 ETTTTEEBE CS
      zf-UBP  52 cyscddeve 60 
                 c +c+ +v 
  EPX74470.1 317 CSNCNAKVA 325
                 444444444 PP

  == domain 4  score: -3.3 bits;  conditional E-value: 2
                 T-HHHHHHHHH---EEEE CS
      zf-UBP  27 nghalkHyeetrHplavd 44 
                  gh +++   ++H++ +d
  EPX74470.1 393 TGHYIAYTLFQDHWYLLD 410
                 466666666566666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (447 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       809  (0.0451224); expected 358.6 (0.02)
Passed bias filter:                      270  (0.0150594); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.44
# Mc/sec: 3074.34
//
Query:       EPX74471.1  [L=211]
Description: meiosis specific coiled-coil protein Mcp7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.9e-29  100.4   0.6      9e-29   99.5   0.6    1.5  1  Mnd1             Mnd1 HTH domain
    5.2e-07   29.7   0.0    1.6e-06   28.1   0.0    1.9  1  LZ3wCH           Leucine zipper with capping helix domain
    0.00074   19.9   0.8     0.0015   18.9   0.3    1.7  2  Penicillinase_R  Penicillinase repressor
    0.00094   19.3   0.2     0.0023   18.1   0.2    1.7  1  FUR              Ferric uptake regulator family
     0.0083   15.3   0.5      0.043   13.0   0.5    1.9  1  Aldo_ket_red     Aldo/keto reductase family
  ------ inclusion threshold ------
      0.015   15.2   0.0      0.031   14.1   0.0    1.6  1  TrmB             Sugar-specific transcriptional regulator Trm
      0.026   14.7   0.2      0.039   14.1   0.2    1.3  1  DUF5025          Domain of unknown function (DUF5025)
       0.04   13.8   0.9       0.12   12.2   0.9    1.9  1  YebG             YebG protein
      0.099   13.1   0.8        0.8   10.1   0.0    2.2  2  AAA              ATPase family associated with various cellul
        0.2   11.8   2.3       0.71   10.0   2.3    1.9  1  DUF3369          Domain of unknown function (DUF3369)
       0.77    9.9   4.3         25    5.1   0.4    3.1  3  DUF2802          Protein of unknown function (DUF2802)
        1.3    8.2   6.4       0.73    9.0   0.1    2.1  3  dCache_2         Cache domain
        6.9    6.8   9.8         11    6.1   0.7    2.8  3  DUF848           Gammaherpesvirus protein of unknown function


Domain annotation for each model (and alignments):
>> Mnd1  Mnd1 HTH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.5   0.6   6.6e-32     9e-29       2      60 .]      16      73 ..      15      73 .. 0.98

  Alignments for each domain:
  == domain 1  score: 99.5 bits;  conditional E-value: 6.6e-32
        Mnd1  2 leifqeskefytlKeleklapkekgivsqsVkdvlqsLvdDglveveKiGssnvyWsFp 60
                ++if+esk+f++lKe+ekl++k  +iv q+VkdvlqsLvdDglv++eKiG+sn+yWsFp
  EPX74471.1 16 ETIFHESKDFFQLKEIEKLGSK-RQIVLQTVKDVLQSLVDDGLVKSEKIGTSNYYWSFP 73
                78********************.9**********************************8 PP

>> LZ3wCH  Leucine zipper with capping helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.1   0.0   1.2e-09   1.6e-06       7      53 ..     158     203 ..     152     205 .. 0.90

  Alignments for each domain:
  == domain 1  score: 28.1 bits;  conditional E-value: 1.2e-09
      LZ3wCH   7 kkatkkakeaanrWtdnifdikswikekfpkskkelneefgIetDeD 53 
                 +k t k+ eaan Wtd i +++s++   ++ +  ++ + + I++D+D
  EPX74471.1 158 EKMTMKYLEAANLWTDQIHSLLSFCRD-MGAELPQVLQACDIPEDLD 203
                 5667799********************.******************9 PP

>> Penicillinase_R  Penicillinase repressor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.3   1.1e-06    0.0015      24      90 ..      31      96 ..      14     117 .. 0.76
   2 ?   -1.8   0.0       2.9   3.9e+03      15      39 ..     131     155 ..     126     167 .. 0.76

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 1.1e-06
                     HHT--GGG---HHHHHHHHHHHHHTTS-EEEEETTEEEEE----XXXXXXXXXXXXXXXXXXXXXXX CS
  Penicillinase_R 24 veeleeekelaysTVktllrrLvkKgllsrekegrafiYsplvseeeavasavkqlldklfegsvke 90
                     +e+l ++++   +TVk +l+ Lv+ gl+++ek g +  Y +  se +  ++++ + l+  ++ +++e
       EPX74471.1 31 IEKLGSKRQIVLQTVKDVLQSLVDDGLVKSEKIGTSNYYWSFPSEAKRSRETTIESLQIQLA-DYRE 96
                     57899999****************************99999999888777777666665554.4444 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 2.9
                      HS-EEHHHHHHT--GGG---HHHHH CS
  Penicillinase_R  15 kgeatvkevveeleeekelaysTVk 39 
                      ++e t +++++el++  + +++T++
       EPX74471.1 131 QKESTLQSLQSELASLNHCNPETIA 155
                      5667778888888887777777774 PP

>> FUR  Ferric uptake regulator family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.2   1.7e-06    0.0023       3      71 ..       5      71 ..       3     108 .. 0.87

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 1.7e-06
                THCHHHHHHHHHHHHHHHSSSBEHHHHHHHHHHTTTT--HHHHHHHHHHHHHTTSEEEEEETTSEEEEE CS
         FUR  3 glklTkqRekilevlekseehlsaeevykelkeedpeislaTVYrtLklleeaglvkelefedgesrye 71
                gl l ++R+++ +++++s+++++ +e+ k     + +i l TV  +L+ l + glvk+ ++ +++ ++ 
  EPX74471.1  5 GLSLEEKRKRLETIFHESKDFFQLKEIEKLG--SKRQIVLQTVKDVLQSLVDDGLVKSEKIGTSNYYWS 71
                777889*********************8865..5568*********************99986665554 PP

>> Aldo_ket_red  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.5   3.1e-05     0.043     118     168 ..      43      96 ..       6     157 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 3.1e-05
                   HHHHHHHHHHHHTTSEEE..EEEES--HHHHHHHHHTTT--EEEEE-B-BTT.- CS
  Aldo_ket_red 118 eevldaleelvkeGkira..iGvSnfsveqlekakkkkkvkivavqveynll.r 168
                     v d+l+ lv+ G++++  iG+Sn+ +   ++ak+ ++++i ++q++  ++ +
    EPX74471.1  43 QTVKDVLQSLVDDGLVKSekIGTSNYYWSFPSEAKRSRETTIESLQIQLADYrE 96 
                   344599********998555****************************999931 PP

>> TrmB  Sugar-specific transcriptional regulator TrmB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   2.3e-05     0.031      37      62 ..      43      68 ..      29      75 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2.3e-05
                HCHHHHHHHHHHCTSEEEESSTTTEE CS
        TrmB 37 skvYevLrsLedkGlVerekgrpklY 62
                ++v +vL+sL+d GlV+ ek  +  Y
  EPX74471.1 43 QTVKDVLQSLVDDGLVKSEKIGTSNY 68
                79*****************9654433 PP

>> DUF5025  Domain of unknown function (DUF5025)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.2   2.8e-05     0.039      37      87 ..      60     109 ..      50     137 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2.8e-05
     DUF5025  37 addidlelftisvaldakksntetdsklriqitdikkgeyeltksklyked 87 
                  ++i  + +++s++++ak+s ++t + l+iq+ d +++  ++++s + +e 
  EPX74471.1  60 SEKIGTSNYYWSFPSEAKRSRETTIESLQIQLADYREKILQVSES-IENET 109
                 57889999******************************9999999.44433 PP

>> YebG  YebG protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.9   8.8e-05      0.12      23      69 ..      90     137 ..      76     142 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 8.8e-05
                 HHHHHHHHHHHHHHHHHHHHHHHSTT--HHHHHHHHH.HHHTTHHHHH CS
        YebG  23 keADayDkmLdladeLaelLeqselgldeeqaEelal.lLaenkeela 69 
                 + AD + k+L +++++++  ++++ + +++q E+ +  +La++  +l+
  EPX74471.1  90 QLADYREKILQVSESIENETAKRKSENEDDQDETFTPqMLAQKESTLQ 137
                 57********************************99615566655555 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00058       0.8      41     123 ..      10      80 ..       4      88 .. 0.81
   2 ?    1.2   0.2      0.34   4.6e+02      72      96 ..     110     135 ..      94     179 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00058
                 HHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTSSSTEEEEEEESSGGGSTHHHHSTT CS
         AAA  41 esekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkkeskvivigatnrpdkldpallrgR 123
                 e+ k+++ +f e    + +  + + Ei++l+++r    + + ++v ++L + +d+   k++    ig++n++++++++  r+R
  EPX74471.1  10 EKRKRLETIFHE----S-KDFFQLKEIEKLGSKR----QIVLQTVKDVLQSLVDDGLVKSE---KIGTSNYYWSFPSEAKRSR 80 
                 555666666644....3.58999***********....89999**********99998644...8**********99998755 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.34
                 HHH.TTCCCHHHHHHHHHHHHHHHHT CS
         AAA  72 ksr.sgseseeeervvnqLlteldgv 96 
                  +r s++e++++e+  +q+l++ +  
  EPX74471.1 110 AKRkSENEDDQDETFTPQMLAQKEST 135
                 33448899999999999999887655 PP

>> DUF3369  Domain of unknown function (DUF3369)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   2.3   0.00052      0.71      14      65 ..       8      63 ..       6     188 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00052
     DUF3369 14 ieasRrGLekIieasaeLfelrsleefaeg...vltqlasllnl.kkdglvcaska 65
                +e++R+ Le I + s++ f+l+++e++ ++   vl+ ++ +l++  +dglv ++k 
  EPX74471.1  8 LEEKRKRLETIFHESKDFFQLKEIEKLGSKrqiVLQTVKDVLQSlVDDGLVKSEKI 63
                89************************986544499999999977577776655443 PP

>> DUF2802  Protein of unknown function (DUF2802)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1      0.77   1.1e+03       9      24 ..      87     115 ..      81     126 .. 0.51
   2 ?    5.1   0.4     0.018        25       5      39 ..     128     170 ..     125     173 .. 0.86
   3 ?    4.3   0.0     0.032        44      42      58 ..     185     201 ..     183     208 .. 0.89

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.77
     DUF2802   9 lekrlkqleerleel.............e 24 
                 l+ +l   +e++ ++             e
  EPX74471.1  87 LQIQLADYREKILQVsesienetakrksE 115
                 55555555555555543333334444433 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.018
     DUF2802   5 rlaelekrlkqleerleel........eqqdpqsklYsqAikl 39 
                  la+ e +l++l+++l++l        + q++ + +Y +A+ l
  EPX74471.1 128 MLAQKESTLQSLQSELASLnhcnpetiALQEKMTMKYLEAANL 170
                 6888999999999999999999999999999999999999877 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.032
     DUF2802  42 qGasveelaeecgLsra 58 
                 +Ga++ ++ ++c+++++
  EPX74471.1 185 MGAELPQVLQACDIPED 201
                 8*************975 PP

>> dCache_2  Cache domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.1   0.00053      0.73     216     271 ..      16      80 ..      10      84 .. 0.87
   2 ?    2.8   2.3     0.039        54      36      76 ..      77     117 ..      74     132 .. 0.82
   3 ?    0.2   2.0      0.24   3.3e+02       5      52 ..      98     145 ..      94     164 .. 0.89

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00053
    dCache_2 216 niilhplkkelngknllevkdkkgkl.......lqelleaakkkge..gfveYkwpkpsgdkerk 271
                 ++i+h++k  ++ k++ ++ +k++ +       lq+l++    k e  g+ +Y+w  ps++k++ 
  EPX74471.1  16 ETIFHESKDFFQLKEIEKLGSKRQIVlqtvkdvLQSLVDDGLVKSEkiGTSNYYWSFPSEAKRSR 80 
                 789999999999999999999999999999999999999999999999************97654 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.039
    dCache_2  36 eyeknsleeslkesLksrveeaysiaeeiyekyknelseee 76 
                 ++++++++esl+ +L +  e+++++ e+i ++  +++se+e
  EPX74471.1  77 KRSRETTIESLQIQLADYREKILQVSESIENETAKRKSENE 117
                 46788899999999999999999999999999888888877 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.24
    dCache_2   5 fkeeiekleeetikerkellksevdsaielieyeknsleeslkesLks 52 
                 + +  e +e+et+k++ e+  ++ +  + ++  +k+s+ +sl+++L s
  EPX74471.1  98 ILQVSESIENETAKRKSENEDDQDETFTPQMLAQKESTLQSLQSELAS 145
                 56667899999999999999999999999999**********999986 PP

>> DUF848  Gammaherpesvirus protein of unknown function (DUF848)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.2      0.62   8.5e+02      68     111 ..       7      52 ..       4      68 .. 0.67
   2 ?    5.6   2.0     0.011        16      83     125 ..      77     119 ..      60     131 .. 0.79
   3 ?    6.1   0.7     0.008        11      58     103 ..     125     170 ..     109     200 .. 0.80

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.62
      DUF848  68 eieakkkelslLkk..lnrkkvarveeLtdkvlelkeevsleldsl 111
                 ++e+k+k l+++ +   +  +++++e+L  k + + + v+  l+sl
  EPX74471.1   7 SLEEKRKRLETIFHesKDFFQLKEIEKLGSKRQIVLQTVKDVLQSL 52 
                 5677888777765445777888888888777665555555555555 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.011
      DUF848  83 nrkkvarveeLtdkvlelkeevsleldsleeaqeeyqegesse 125
                  r + +++e L+ + ++ +e + +  +s+e++  + + +++++
  EPX74471.1  77 KRSRETTIESLQIQLADYREKILQVSESIENETAKRKSENEDD 119
                 5667789**********************99988777664433 PP

  == domain 3  score: 6.1 bits;  conditional E-value: 0.008
      DUF848  58 ikalveavdteieakkkelslLkklnrkkvarveeLtdkvlelkee 103
                   +++ + + +++  + el++L++ n++ +a  e++t k le+ + 
  EPX74471.1 125 TPQMLAQKESTLQSLQSELASLNHCNPETIALQEKMTMKYLEAANL 170
                 4688999999***************************999998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2127  (0.118635); expected 358.6 (0.02)
Passed bias filter:                      835  (0.0465726); expected 358.6 (0.02)
Passed Vit filter:                        78  (0.00435049); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.54u 0.29s 00:00:00.83 Elapsed: 00:00:00.44
# Mc/sec: 1431.52
//
Query:       EPX74472.1  [L=497]
Description: sterol 14-demethylase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-74  251.5   0.0    1.8e-74  251.2   0.0    1.0  1  p450      Cytochrome P450


Domain annotation for each model (and alignments):
>> p450  Cytochrome P450
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  251.2   0.0     1e-78   1.8e-74       4     461 ..      37     491 ..      33     493 .. 0.91

  Alignments for each domain:
  == domain 1  score: 251.2 bits;  conditional E-value: 1e-78
                 ESEHHCCHCHHHHTTTCCHHHHHHHHHHHH-SEEEEEETTEEEEEEESHHHHHHHHCTSTTTTCEESSHHHHHHHHHTTTTSSSTTCGH.HHHHHHHHH CS
        p450   4 ptplplvgnllqlgrkeelhevlrklqkkygpifrlklgskpvvvlsgpeavkevlikkgeefsgrpdeallatsrkpfkgkgvlfang.ekwkklRrf 101
                 + ++p++g+++ +g    ++ +++++++kyg++f++  ++++++ + g +    +++ k ++ s++  +++l+t   p  gk+v+++ + +  +++++f
  EPX74472.1  37 FHWVPFFGSAIPYG--IDPYAFFHECREKYGDVFTFVCMGRKMTAYLGVKGNDFLFNGKLADLSAEEAYSHLTT---PVFGKDVVYDVPnHVLMEHKKF 130
                 5699*********9..78***********************************************999999999...************8889999999 PP

                 HHHHHTSHSTTTHHHHHHHHHHHHHHHHHCCCCHCSEEETHHHHHHHHHHHHHHHHHSSHHHTTTSSHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHTC CS
        p450 102 ltptltsfgklsleelveeeaedlveklrkkagesselditellskaaldvigsilFgarfdlledeklselvkaveelssllskssvqllllfpllky 200
                 +   l +++ +s+++l+  e++ ++++   + ++      +e +++   ++  +++F+a+  l + e ++ +++ +++l++ l++ +  ++++fp+l  
  EPX74472.1 131 IKSGLGFPQFRSYVPLILNEMDAFLNT---SPEFG---PGKEGIADLLKTMPVMTIFTASRTLQGAEVREGFDAGFADLYHDLDQGFSPINFVFPWL-- 221
                 999999993336666666666666555...55555...345777777778888999999999999999***************************55.. PP

                 CSCHHHHHHHHHHHHHHHHHHHHHHHHHHCHCHCSCSSCSHHHHHHHHCTTCTCTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHH CS
        p450 201 lptkllrklkeavkklkdlldklieerretldsakksrrdfldalllakkekkgesklsdeelaatvlellfaGvdTtsstlswaLyeLaknPevqekl 299
                  p + +r+ ++a++++++++ ++i++rr++ ++      d++  l+++k  ++g+ +l+++e+a  ++ ll+aG++T+++t++waL++L  +Pev e+l
  EPX74472.1 222 -PLPRNRRRDRAHNIMQQTYLNIIKQRRSSPENP---GSDMIWTLMNSK-YRDGR-NLKEHEIAGIMIALLMAGQHTSAATIMWALTLLGSKPEVIEML 314
                 .888999999999******************999...99*********8.66776.******************************************* PP

                 HHHHHHHCCTTT..T-HHHHCCT-HHHHHHHHHHHHHSCSSTTEEEEESSSCEEETT..EEE-TT-EEEEEHHHHHT-TTTSSSTTS--GGGGB-TTS. CS
        p450 300 reEidevlgdkr..eptyddlqklpyldavikEtLRlhpvvplllpRevtkdvvirg..ylipkGtevivnlyalhrdpevfpnPeeFdpeRFldekg. 393
                 +eE ++vlg+ +  ++++d  ++lp+l+ vi+EtLRlhp+++ +++R+v++d+ +++   +ip+G++ +  +++    +++f +++eF peR+ ++   
  EPX74472.1 315 YEEQKRVLGEGEnfHVDFDKYKDLPLLNYVIRETLRLHPPIH-SIMRKVKRDLPVPDskMVIPAGSHLLAAPGYSATHEDFFTHAKEFCPERWGERPDd 412
                 ********888878999*************************.**************************************************766556 PP

                 .............CTESSCTT--TTEEGGGS-TTHHHHHHHHHHHHHHHHHHEEEEESTSTSGGEEESSCSSEEESSSSEE CS
        p450 394 .............nskrksfaflPFGaGpRnCiGerlArmelklflatlLqnFevelqpetdpppileksglllppkpikl 461
                               sk+ s  +lPFGaG++ CiGe++A+m+l  ++ ++++ +++++   +++p+ +  s+++lp  p k+
  EPX74472.1 413 eenaeqidygyglVSKGGSSPYLPFGAGRHRCIGEQFAYMHLTTIICKFVHDYTWTT--VGKVPDVDYSSMVALPLAPVKI 491
                 6779*********778****************************************6..5789999888888888777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (497 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       372  (0.0207485); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3733.07
//
Query:       EPX74473.1  [L=790]
Description: rho-type GTPase activating protein Rga8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.1e-14   54.5   0.6    3.1e-14   53.1   0.1    2.1  2  RhoGAP       RhoGAP domain
    2.1e-13   50.1   0.0    4.6e-13   49.0   0.0    1.7  1  DEP          Domain found in Dishevelled, Egl-10, and Pleckst
    7.3e-07   29.4   0.8    2.3e-06   27.8   0.8    1.9  1  FCH          Fes/CIP4, and EFC/F-BAR homology domain
  ------ inclusion threshold ------
      0.045   14.1   0.2       0.14   12.5   0.2    1.9  1  DUF3232      Protein of unknown function (DUF3232)
       0.13   12.4   2.1       0.26   11.4   0.2    2.5  2  Flagellin_N  Bacterial flagellin N-terminal helical region


Domain annotation for each model (and alignments):
>> RhoGAP  RhoGAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       1.2   4.3e+03      93     127 ..     356     390 ..     335     413 .. 0.64
   2 !   53.1   0.1   8.7e-18   3.1e-14      24     126 ..     509     614 ..     480     636 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 1.2
                 HHHHHHHHTTS-HHHHHHHHHHHHHHHHHHHTHHH CS
      RhoGAP  93 lealkellekLPkenrdtLryLlehLkrvaenske 127
                   ++ke++ +L k+   + + +++h++ +++++ e
  EPX74473.1 356 NTSYKEAVYDLDKCRTLLEENIVDHFQFLQKCEVE 390
                 56677777777777777777777777777776655 PP

  == domain 2  score: 53.1 bits;  conditional E-value: 8.7e-18
                 S-S-HHHHHHHHHHHHHTGGGCT.TTTTSCHHHHHHHHHHHHHHSSSTTTTGGHHHHHHH..HHTSSSHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHH CS
      RhoGAP  24 vsgskarvkelreafdkgkavds.dleeedvhavaslLKrfLrelpepLltkelyeelie..aaksedeeerlealkellekLPkenrdtLryLlehLk 119
                 v+   +++++lrea++  ++v++  l ++++ +v + LK+fL elp+++++ +++e + +  a++ +de  r++ l++ll++L ++n +tL +++ hL+
  EPX74473.1 509 VNSPLSSIHQLREALNYAPNVSKdILVQYSPTVVVGTLKLFLLELPDSIIPSSAFELIRSiyANHGNDEVYRVRLLQNLLSQLRRVNLATLSAIITHLH 607
                 6667789**************998899*******************************98434444899999*************************** PP

                 HHHHTHH CS
      RhoGAP 120 rvaensk 126
                 r+++   
  EPX74473.1 608 RLISLTT 614
                 *988544 PP

>> DEP  Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.0   0.0   1.3e-16   4.6e-13       2      72 .]     226     299 ..     225     299 .. 0.96

  Alignments for each domain:
  == domain 1  score: 49.0 bits;  conditional E-value: 1.3e-16
                 S-SCEEECT.TEEESSE-HHHHHHHHHHHHTSSSSHHHHHHHHHHHHHCTSCECSSSSHCC..--SSSSS-EEE CS
         DEP   2 vklkdrrkh.lktypncftGseavdWLldnldiedreeAvalgqlLldqgliehvedkhqe..FrdskqafYqf 72 
                 ++l+d+r+  l ty+n+++G+ +v+WL++nl++ +   A+a+gq+L+++g+++++++ +    F +s++++Yq+
  EPX74473.1 226 LPLQDKRVPiLGTYQNTCSGNIIVSWLQENLPVPTLVAAEAFGQDLIAEGFLRQIGQIGVGgtFVNSTNFYYQW 299
                 689****************************************************99888889**********8 PP

>> FCH  Fes/CIP4, and EFC/F-BAR homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.8   6.3e-10   2.3e-06       1      76 [.      19      97 ..      19      98 .. 0.94

  Alignments for each domain:
  == domain 1  score: 27.8 bits;  conditional E-value: 6.3e-10
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT----TT.-.......HHHHHHHHHHHHHHHHHHHHHH CS
         FCH  1 gfkvlqkrleqgialledlqeflkeRaeiEkeYakkLqkLakkylkrr.kkks..eestlvtawtvlleeteklaqshl 76
                g+++l++rl+ g++ +e++++++k   +  ++++ +Lq ++k + k++ k+++  ++ ++++a++ l++e+e ++++h 
  EPX74473.1 19 GINTLFERLSLGTQENEQVKTLIKLYKQANEDFGERLQEITKECMKNGnKEETneDCTSSSKAFEGLRSEIETQGKQHV 97
                6789******************************************99777669999999******************6 PP

>> DUF3232  Protein of unknown function (DUF3232)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.2   3.9e-05      0.14      38     106 ..     333     401 ..     310     427 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 3.9e-05
                 HHHHHHHHHHHHHHHHH.CCTS-HH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-T CS
     DUF3232  38 trYvkkvvemearlasa.rfrleae.elkelveelDrsRrlahnslisslkiinrllvkeeveelseagle 106
                  +Y  k + me+ l+ a r  ++a+  +ke v +lD+ R+l  + ++   + + + ++ e+v+ ++++ ++
  EPX74473.1 333 IQY-RKQYAMESPLQRAhREAVDANtSYKEAVYDLDKCRTLLEENIVDHFQFLQK-CEVERVKYFKNTFMD 401
                 333.35688999998873566887637******************9999998876.888999888877665 PP

>> Flagellin_N  Bacterial flagellin N-terminal helical region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.2   7.3e-05      0.26      55     126 ..      25      91 ..      16      96 .. 0.93
   2 ?   -1.8   0.1      0.88   3.2e+03      42      67 ..     740     765 ..     736     770 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 7.3e-05
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TTTS-SHHHHHHHHHHHHHHHHHHHHHH- CS
  Flagellin_N  55 aglsqlvrnnslgisrlqtaqgalselsdilqrlkelavaasndsnsdedrqslqaelqqLtdelnriantt 126
                  ++ls  +++n+ +  +++  ++a +   + lq++ +  + ++n++ ++ed +s ++++++L++e++     t
   EPX74473.1  25 ERLSLGTQENEQVKTLIKLYKQANEDFGERLQEITKECMKNGNKEETNEDCTSSSKAFEGLRSEIE-----T 91 
                  7899999**********************************************************9.....4 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.88
                  HHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Flagellin_N  42 aglaisvslrsqiaglsqlvrnnslg 67 
                  ++++ + + r+++++ sq+++++++ 
   EPX74473.1 740 SYASNARRGRRNVSQASQVSDTSEFS 765
                  56677778889999999999988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (790 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1571  (0.0876234); expected 358.6 (0.02)
Passed bias filter:                      567  (0.0316247); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.72u 0.31s 00:00:01.03 Elapsed: 00:00:00.47
# Mc/sec: 5055.95
//
Query:       EPX74474.1  [L=401]
Description: peptide chain release factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.4e-52  176.2   0.5    6.4e-52  176.2   0.5    2.0  2  PCRF      PCRF domain
    6.5e-35  119.6   5.3    6.5e-35  119.6   5.3    2.0  2  RF-1      RF-1 domain
  ------ inclusion threshold ------
        1.1    9.4   4.3        1.1    9.4   0.2    2.8  3  DUF1912   Domain of unknown function (DUF1912)


Domain annotation for each model (and alignments):
>> PCRF  PCRF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  176.2   0.5   1.1e-55   6.4e-52       2     193 .]      50     243 ..      49     243 .. 0.96
   2 ?    0.8   0.2     0.064   3.8e+02      23      58 ..     304     339 ..     290     393 .. 0.56

  Alignments for each domain:
  == domain 1  score: 176.2 bits;  conditional E-value: 1.1e-55
                 HHHHTTTTTST.-GGGTTTGGGSSSTTHHHHHTHHHHHHHHHHHHHTTTHHH...HT......-S-..-GGGTHHHHHHHHHH..HHHHHT-..SSSTT CS
        PCRF   2 eeeleelekklsdpevwedqekakklskelaeleeivealeeleealedleeakelle..edeelaelaeeeleelekeleeleeelkklLlpkdende 98 
                 ++e++e+e + s++e +++ +++ +l+k++ +l++i+++++++e++ ++lee++++ +  +d+el+ la++e ++l+  l +  e+l++ Ll +    +
  EPX74474.1  50 SNEYKEIEINRSENEAHNNVNNV-DLAKRFVRLQKIYNSFSNYESVYKQLEELQSMEAceADAELKLLARSETDSLRPLLLSSIEKLENSLLSQPLSHQ 147
                 689************99987775.5******************************97466******************999999********8888999 PP

                 SEEEEEEEE-SSTHHHHHHHHHHHHHHHHHHHTTT-EEEEEEEEE.SSS.SEEEEEEEEESTTHHHHHGGG-EEEEEEEE-TTSSS--EEEEEEEE CS
        PCRF  99 knaileiraGaGGdeaalfaedLlrmYtryaerkgwkvevldase.eeagGikevtleiegegaYgkLkfEsGvHRvqRvpetesqgrihTStatV 193
                 ++a++eir+G+GG+eaalfa++L+++Yt+ya+ k+wk++++++se + ++Gi+e++++++gegaYg+L  E GvHRvqR p+te++gr+hTSta+V
  EPX74474.1 148 SSALIEIRPGVGGTEAALFAKELADLYTKYANYKNWKTKIISSSEvQGTEGISEMIFSVDGEGAYGHLMLEGGVHRVQRTPATETKGRVHTSTASV 243
                 9********************************************99999********************************************99 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.064
                 GSSSTTHHHHHTHHHHHHHHHHHHHTTTHHH...HT CS
        PCRF  23 kakklskelaeleeivealeeleealedleeakell 58 
                 + ++  k +  l++ ++a++e++e++e+ ++ k  +
  EPX74474.1 304 QHQNREKAFMVLNSRLAAIKEAKEMEEERAKRKVQV 339
                 333333333334444444444444444433322222 PP

>> RF-1  RF-1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.26   1.5e+03      13      34 ..      55      76 ..      38     115 .. 0.65
   2 !  119.6   5.3   1.1e-38   6.5e-35       8     116 .]     259     362 ..     253     362 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.26
                EEEEE---SSSSSSGCSSSCEE CS
        RF-1 13 eidtfrssGaGGQnVNktesaV 34
                ei++ rs+     nVN ++ a 
  EPX74474.1 55 EIEINRSENEAHNNVNNVDLAK 76
                3444455555555555555443 PP

  == domain 2  score: 119.6 bits;  conditional E-value: 1.1e-38
                 -GGGEEEEEE---SSSSSSGCSSSCEEEEEETTTTEEEEEEECSSSHHHHHHHHHHHHHHHHHHHHHHHCCCCCHTTTTT-.S.-S---S.--ECEEEE CS
        RF-1   8 dekdleidtfrssGaGGQnVNktesaVrlthlptgvivvecqeeRsqekNrekAlerLkaklkekeleeekeeekkrrvkkekkkigtgs.sekiRtyn 105
                 +++d++i+++rs+GaGGQ+VN+tesaVrlth+ptg i+v++q++Rsq++NrekA+ +L+++l++ + ++e eee+++r    k +++++s sek Rtyn
  EPX74474.1 259 SPSDIKIEVMRSRGAGGQHVNRTESAVRLTHVPTG-ITVSMQDSRSQHQNREKAFMVLNSRLAAIKEAKEMEEERAKR----KVQVSSSSrSEKLRTYN 352
                 589********************************.8*************************7743333333333333....3467778889******* PP

                 CGCTTEEEETT CS
        RF-1 106 kkpqsrvkdhr 116
                 + +q+rv+dhr
  EPX74474.1 353 Y-NQNRVTDHR 362
                 *.99******9 PP

>> DUF1912  Domain of unknown function (DUF1912)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.1      0.15   8.8e+02      58      69 ..     173     184 ..     162     188 .. 0.85
   2 ?    9.4   0.2   0.00019       1.1      25      83 ..     321     379 ..     308     380 .. 0.85
   3 ?   -3.0   0.1       1.5   8.7e+03       6      19 ..     382     395 ..     381     397 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.15
                 HHHHHHHHHHT- CS
     DUF1912  58 llgkfenykagk 69 
                 l +k++nyk+ k
  EPX74474.1 173 LYTKYANYKNWK 184
                 679******987 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00019
                 HHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TTS----XXXXXX CS
     DUF1912  25 aleaskkvleedkderakdaliryeskldaykfllgkfenykagkgfhdlPdelfGerh 83 
                 a++++k++ ee  +++ + ++     kl +y++ + + ++++ g ++h+l   l G+ +
  EPX74474.1 321 AIKEAKEMEEERAKRKVQVSSSSRSEKLRTYNYNQNRVTDHRLGLSYHNLDSFLEGTNK 379
                 77888998888888888888777788************************988888766 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 1.5
                 HHHHHHHHHHHHHH CS
     DUF1912   6 eflkdfeewvntqv 19 
                 efl+   +w ++q+
  EPX74474.1 382 EFLETIRKWNRQQL 395
                 899******99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1396  (0.0778627); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.44
# Mc/sec: 2725.08
//
Query:       EPX74475.1  [L=1367]
Description: phospholipase D [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.1e-26   90.9   0.9    1.7e-25   89.2   0.1    2.4  2  PX        PX domain
    8.6e-19   66.9   1.7    2.2e-09   37.1   0.1    2.7  2  PLDc      Phospholipase D Active site motif
    8.5e-13   48.3   0.1    6.4e-06   26.1   0.0    2.9  3  PLDc_2    PLD-like domain
  ------ inclusion threshold ------
        1.4    8.8   3.9         10    6.0   0.0    3.7  4  DUF4028   Protein of unknown function (DUF4028)


Domain annotation for each model (and alignments):
>> PX  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.2   0.1   3.9e-29   1.7e-25       4     112 ..     210     376 ..     207     377 .. 0.98
   2 ?   -1.6   0.1      0.58   2.6e+03      14      42 ..    1280    1309 ..    1270    1310 .. 0.79

  Alignments for each domain:
  == domain 1  score: 89.2 bits;  conditional E-value: 3.9e-29
                 EEEEEEEEEEETTSSEEEEEEEEEETTS..SSEEEEEEEHHHHHHHHHHHHHHHT.......TSTSTSSSTSGSSSSS..................... CS
          PX   4 aqvsvleretsgskkhsyylyevelktg..akewtvkRrYsdFeeLhskLlrkfp.......rvkiPplPkkvlfgsv..................... 72 
                 ++vsv+++e+++++++s+++++ve+++g  a++wt++R+ +dF++Lhs++l +++       r+k+P++Pk+vl++ v                     
  EPX74475.1 210 LRVSVVDVEPKQNRIQSTITMQVEYGSGpnAIRWTIYRQLRDFINLHSHFLVFEFqhhfygkRMKLPKFPKEVLPYLVklrgynratfanpddplidet 308
                 689************************************************************************999********************* PP

                 ...........................CTTSHHHHHHHHHHHHHHHHHHHTSCHHHH.SHHHHHHHHS CS
          PX  73 ...........................rkkdeefiekrrkgLeeyLqrllnhpelrn.sevlteFLev 112
                                            +kk  +f++++ ++L +yLq ++n  ++++ ++vl++FLe 
  EPX74475.1 309 qslssisiesqsadipqqnnnrgnsgvKKKVANFWTIQGNTLGKYLQDMINCLQFFPeVNVLYTFLEM 376
                 ******************************************************************96 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.58
                  ETTSSEEEEEEEEEETTS.SSEEEEEEEHH CS
          PX   14 sgskkhsyylyevelktg.akewtvkRrYs 42  
                  +++k++s +l  v+ ++g ++e+++kR +s
  EPX74475.1 1280 EMEKESSDFLSGVSSENGnSEEKNIKRHFS 1309
                  37788888888899998899*******998 PP

>> PLDc  Phospholipase D Active site motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.1   0.1   4.9e-13   2.2e-09       2      28 .]     640     666 ..     639     666 .. 0.96
   2 !   28.5   0.1   2.5e-10   1.1e-06       3      28 .]     943     968 ..     941     968 .. 0.93

  Alignments for each domain:
  == domain 1  score: 37.1 bits;  conditional E-value: 4.9e-13
                 TBEE---EEEETTTEEEEE---SSHHH CS
        PLDc   2 mgthHqKivivDdrvafvGgaNLcdgr 28 
                 ++ hH+K v+vDd++af+Gg +Lc gr
  EPX74475.1 640 FWAHHEKLVVVDDAIAFIGGIDLCFGR 666
                 7***********************997 PP

  == domain 2  score: 28.5 bits;  conditional E-value: 2.5e-10
                 BEE---EEEETTTEEEEE---SSHHH CS
        PLDc   3 gthHqKivivDdrvafvGgaNLcdgr 28 
                 + +H Ki+i Ddrva++G+aN++ ++
  EPX74475.1 943 IYVHGKIMIADDRVAVIGSANINERS 968
                 678********************996 PP

>> PLDc_2  PLD-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   2.4e-07    0.0011       7      99 ..     551     660 ..     545     668 .. 0.67
   2 ?   -2.3   0.0      0.85   3.8e+03       2      36 ..     814     861 ..     813     869 .. 0.69
   3 !   26.1   0.0   1.4e-09   6.4e-06      35     114 ..     884     977 ..     877     989 .. 0.59

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 2.4e-07
      PLDc_2   7 sAkksidiatyyf...........vsdreildallk.aakrgvkvrilldskkddagavdeaslkelkellleagvevrvfe...t......llgslHa 84 
                 +Ak++i i    +             d++ +d+ll+ +a++gvkv i++ +++d  ++v+ +s+++ + l ++ + ++ v+    +      +    H+
  EPX74475.1 551 NAKHTIMIHGWWLtpelqmrrpysLADKWRIDHLLQeKAREGVKVYIMVYRNID--ATVPIDSFHTKSYL-QSLHPNIFVIRspsHfrqnalF-WAHHE 645
                 5555555555555444444444436777789999888**************876..44455555555555.5555665565533325444432.577** PP

      PLDc_2  85 KlylidgktvivGSs 99 
                 Kl+++d+ ++++G+ 
  EPX74475.1 646 KLVVVDDAIAFIGGI 660
                 *************86 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.85
      PLDc_2   2 iqliksAkksidiatyyf.............vsdreildallkaakrg 36 
                 +++i+++++ i++ +++f              + +++++++ +a+k++
  EPX74475.1 814 VKCIEKSEHFIYVENQFFitstisdgtvienRVGDALVERITRAHKNN 861
                 678999999999999999666655555544444444566666666665 PP

  == domain 3  score: 26.1 bits;  conditional E-value: 1.4e-09
      PLDc_2  35 rgvkvrilldskkddagavdeaslkelkellleagvevrvfet.............ll.....gslHaKlylidgktvivGSsNltkrgldlnlElnv 114
                 +g  +r+++d + +   +  + +++ + +l  ++g++  ++ +             ++       +H K+++ d++++++GS+N+++r+l +n+++ +
  EPX74475.1 884 EGSSLRLIVDCQYK---SICRGENSIFGRL-KAKGIDGSKYLKfyglrgwahigpeHElstdlIYVHGKIMIADDRVAVIGSANINERSLLGNRDSEI 977
                 56666667666433...2222333333333.33444433333211222232233331134444678************************99887654 PP

>> DUF4028  Protein of unknown function (DUF4028)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0    0.0023        10      16      38 ..     841     863 ..     832     866 .. 0.88
   2 ?    0.4   0.1      0.13   5.7e+02      26      57 ..    1220    1255 ..    1214    1263 .. 0.76
   3 ?   -1.4   0.3      0.46     2e+03      42      55 ..    1260    1273 ..    1241    1276 .. 0.73
   4 ?   -0.8   0.0      0.29   1.3e+03       9      32 ..    1284    1310 ..    1280    1323 .. 0.70

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0023
     DUF4028  16 tvqnknGdqyvkkwfrkhennek 38 
                  ++n+ Gd  v +  r h+nne+
  EPX74475.1 841 VIENRVGDALVERITRAHKNNER 863
                 578******************97 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.13
     DUF4028   26 vkkwfrkhenneklGrptfkevekd....wkenkes 57  
                     w +  enn  + r  fk v  d    w   +es
  EPX74475.1 1220 DNIWCKTAENNTLFYRYIFKCVPDDtiltWDAYHES 1255
                  5679999*************9987755556555555 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 0.46
     DUF4028   42 ptfkevekdwkenk 55  
                    fke +k w+e  
  EPX74475.1 1260 QLFKEEQKRWREQE 1273
                  469*******9975 PP

  == domain 4  score: -0.8 bits;  conditional E-value: 0.29
     DUF4028    9 ssnsflctvqnknGd...qyvkkwfrk 32  
                   s  fl  v   nG+   + +k+ f k
  EPX74475.1 1284 ESSDFLSGVSSENGNseeKNIKRHFSK 1310
                  45679****999997222456666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1367 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       738  (0.0411624); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.84u 0.35s 00:00:01.19 Elapsed: 00:00:00.51
# Mc/sec: 8048.77
//
Query:       EPX74476.1  [L=217]
Description: ribosomal protein subunit S24 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.5e-34  116.9   0.4    1.2e-33  116.3   0.4    1.3  1  MRP-S28   Mitochondrial ribosomal subunit protein
  ------ inclusion threshold ------
       0.35   10.7   3.2        0.9    9.4   0.5    2.6  2  Sas6_CC   Sas6/XLF/XRCC4 coiled-coil domain


Domain annotation for each model (and alignments):
>> MRP-S28  Mitochondrial ribosomal subunit protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.3   0.4   1.3e-37   1.2e-33       1     126 [.      84     205 ..      84     206 .. 0.96

  Alignments for each domain:
  == domain 1  score: 116.3 bits;  conditional E-value: 1.3e-37
     MRP-S28   1 efkppkeeaplrfrytsylgeehpasrkvvlevkvadL.kleekqkhklklLagprynpetdviklsserfesaaqNkrylsdilekLlkeakdlkddf 98 
                 +++p++ +++l f++ +++++ +    kvvl++kv++L +l+++++h lklL+g rynpetd +k+s+++++s  qNk +l++ l++L+ e+k+lk +f
  EPX74476.1  84 PYRPRSVDQVLVFESPIEMSSTATPVSKVVLKFKVSNLpHLQNNERHVLKLLSGVRYNPETDEVKMSCNKYPSSLQNKLFLAECLNSLISESKRLKTKF 182
                 6999999*******************************999********************************************************** PP

     MRP-S28  99 eDvpldtrhlkakkekkrsrkaefpeeW 126
                 +Dvpld rh+k kk++      +fp+ W
  EPX74476.1 183 ADVPLDIRHVKKKKQD-----LRFPKAW 205
                 **********999554.....59***99 PP

>> Sas6_CC  Sas6/XLF/XRCC4 coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.5    0.0001       0.9       5      26 ..     161     182 ..     161     184 .. 0.90
   2 ?    0.8   0.1     0.049   4.4e+02      19      27 ..     203     211 ..     191     212 .. 0.84

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0001
                 HHHHCCHHHHHHHHHHHHHHHH CS
     Sas6_CC   5 KKYLAvCLkslKeeKqlLeqkL 26 
                 K +LA CL sl  e ++L+ k+
  EPX74476.1 161 KLFLAECLNSLISESKRLKTKF 182
                 569***********99999997 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.049
                 HHHHHHHHH CS
     Sas6_CC  19 KqlLeqkLk 27 
                 K +Leq L+
  EPX74476.1 203 KAWLEQSLQ 211
                 999999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       433  (0.0241508); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1656.68
//
Query:       EPX74477.1  [L=331]
Description: exosome subunit Rrp4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.4e-17   61.6   0.5      8e-17   60.8   0.5    1.5  1  ECR1_N    Exosome complex exonuclease RRP4 N-terminal region
    3.4e-08   33.7   0.2    6.2e-08   32.9   0.2    1.5  1  KH_6      KH domain
     0.0042   17.7   0.1       0.05   14.2   0.0    2.4  2  EXOSC1    Exosome component EXOSC1/CSL4
  ------ inclusion threshold ------
      0.024   15.0   0.3        2.2    8.7   0.0    3.5  4  S1        S1 RNA binding domain


Domain annotation for each model (and alignments):
>> ECR1_N  Exosome complex exonuclease RRP4 N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.8   0.5   1.8e-20     8e-17       1      38 []      59      96 ..      59      96 .. 0.97

  Alignments for each domain:
  == domain 1  score: 60.8 bits;  conditional E-value: 1.8e-20
                EE-TT-EEEETTTSEE-TTEEEETTEEEESSSEEEEEE CS
      ECR1_N  1 iVtPGevlttdeefmrGhGTYvrggtiyAsvaGtvevv 38
                +V PG+ +t+d++fmrGhGTY ++g iyAsv+G+v++v
  EPX74477.1 59 MVAPGQLITDDPQFMRGHGTYFEDGGIYASVTGVVQRV 96
                699*********************************97 PP

>> KH_6  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.9   0.2   1.4e-11   6.2e-08       1      45 [.     202     243 ..     202     244 .. 0.95

  Alignments for each domain:
  == domain 1  score: 32.9 bits;  conditional E-value: 1.4e-11
        KH_6   1 GmlfeVslslvrRllnhvLeeLgkagpfeiavGlNGriWvksesp 45 
                 G++++V++slv R ++h+  +L+ +  +++++ +NG+ W++++++
  EPX74477.1 202 GVFLKVPSSLVVRSKSHI-FNLPGG--VDLILSVNGYAWISKHNK 243
                 99****************.9**996..**************9986 PP

>> EXOSC1  Exosome component EXOSC1/CSL4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.0   1.1e-05      0.05       1      36 [.     110     143 ..     110     159 .. 0.84
   2 ?    0.3   0.0      0.23     1e+03      83     101 ..     155     173 ..     152     180 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 1.1e-05
                 -S-TT-EEEEEEEEEESSEEEEEEEEECTBSBCCCE CS
      EXOSC1   1 lPkegdvVLarvtrlrkkqalveilsvegennvlsd 36 
                 +P++gd++++r+t+++ k+  v+i s+++   vl+ 
  EPX74477.1 110 VPEIGDLIIGRITEVQPKRWKVDIGSKQDA--VLML 143
                 6**************************876..4444 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.23
                 ECCSSSTT-GGCTEECTTE CS
      EXOSC1  83 RatekdrvkviemfrpGDI 101
                 R  e d+ ++ + f++GD 
  EPX74477.1 155 RKLETDELQMRNYFQEGDR 173
                 677899************5 PP

>> S1  S1 RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.1      0.23     1e+03       7      17 ..      88      98 ..      85     100 .. 0.88
   2 ?    8.7   0.0   0.00049       2.2       2      38 ..     111     147 ..     110     163 .. 0.93
   3 ?   -3.3   0.0       2.6   1.2e+04       2      14 ..     168     180 ..     167     181 .. 0.78
   4 ?    0.7   0.0      0.15   6.7e+02      52      72 ..     243     263 ..     239     265 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.23
                EEEEEEEEEET CS
          S1  7 vveGeVtsvtk 17
                 v+G+V++v+k
  EPX74477.1 88 SVTGVVQRVNK 98
                699******97 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00049
                 STTTCEEEEEEEEEETTEEEEEETTTEEEEEEGGGSS CS
          S1   2 pekgevveGeVtsvtkgGafVelgngvegfvpasels 38 
                 pe+g+ + G +t+v ++   V++g ++++ + +s++ 
  EPX74477.1 111 PEIGDLIIGRITEVQPKRWKVDIGSKQDAVLMLSSIN 147
                 799*****************************99985 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 2.6
                 STTTCEEEEEEEE CS
          S1   2 pekgevveGeVts 14 
                 +++g+++ +eV++
  EPX74477.1 168 FQEGDRLVAEVQQ 180
                 6789999999886 PP

  == domain 4  score: 0.7 bits;  conditional E-value: 0.15
                 TTEEEEEEEEEEETTTTEEEE CS
          S1  52 vGdevkvkvlkvdkdrrriil 72 
                 +++e  v ++++++++ ++i 
  EPX74477.1 243 KNQESSVSITRLEEEASEAIY 263
                 7899**********9998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       751  (0.0418874); expected 358.6 (0.02)
Passed bias filter:                      547  (0.0305092); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.62u 0.30s 00:00:00.92 Elapsed: 00:00:00.52
# Mc/sec: 1904.28
//
Query:       EPX74478.1  [L=395]
Description: tryptophan-tRNA ligase Wrs1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.6e-22   80.2   0.0    3.6e-22   79.0   0.0    1.5  1  tRNA-synt_1b  tRNA synthetases class I (W and Y)
     0.0066   16.2   0.0      0.013   15.2   0.0    1.4  1  NIF           NLI interacting factor-like phosphatase


Domain annotation for each model (and alignments):
>> tRNA-synt_1b  tRNA synthetases class I (W and Y)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.0   0.0   4.1e-26   3.6e-22       3     291 ..      80     367 ..      78     369 .. 0.88

  Alignments for each domain:
  == domain 1  score: 79.0 bits;  conditional E-value: 4.1e-26
                   HS--EEEEEEETSSS.-BGGGHHHHHHHHHHHH.TTSEEEEEEEHHHHHTTTTT-SSHHHHHHHHHHHHHHHHHHHHHTCHTTTEEEEETHHHHTTH CS
  tRNA-synt_1b   3 erplrvysGidPTgk.lHlGylvplkklvelqk.aghevffliaDlhAiigdpskaeerklrkreevlenaikaqlakgldpekaevvlqsewlehl 97 
                   ++p+ +y+G  P+++ +HlG+l+p+    +lq+  ++ +++   D + ++ +++  ++++ +  +++ ++    ++a+g+dp+k+ ++ ++++    
    EPX74478.1  80 KKPFYLYTGRGPSSDsMHLGHLIPFLFCKWLQDvFQVPIVIQMTDDEKFLFKQN-LSLEECQRFARENAKD---IIACGFDPKKTLIFANTQYVGGA 172
                   68999***************************7666677777899999999999.7888888888888888...*********************** PP

                   HHHHHHHHHHTTCBHHHHHHHHHCCHHCSSSC--BHHHHHHHHHHHHHHHHTCHS...........EEEEEGGGHHHHHHHHHHHHHHHHHSTTSS- CS
  tRNA-synt_1b  98 elaellrdlgklgslnrmlqfksvkkrleegegislgeftYplLqaaDilllkad...........lvpgGsDQkqnielgrdlarrfnkkevfkkp 183
                    +  ++r ++k+++ n+  ++      ++ ++  s+g + +   qaa ++                l p   DQ+  ++l+rd+  r++     kkp
    EPX74478.1 173 FYQNIVR-ISKCITANQAKSCFG----FNDSD--SIGKLHFASIQAAPSFSSSFPnifngakdvpcLIPCAIDQDPYFRLTRDVSARLKF----KKP 258
                   9999886.566688888888877....44434..99***********9885544368899999*************************55....5** PP

                   EEEEET-BBSTTSSS.BTTCETTCGC-BTTCCHHHHHHHHH.HCHCSTTC..SHHHHHHHHHTHHHCHHHHHHHHCCSEEESSHHHHHHHHHCCCCH CS
  tRNA-synt_1b 184 egltvplltgldGek.KmSKSagnsaIfLddekesvkkkiq.kavtdsde..evekllklktelsnelierleavsgkkpkreaeellaeevtklvh 276
                     +  ++ + l+G + KmS S+++saIf++d ++++k k++ +a++  ++  e+++ + +++ ++   +++l+ +++ +   +++el   ++++++ 
    EPX74478.1 259 ALIHSRFFPALQGPQsKMSASKDSSAIFMTDTPNKIKNKVNkYAFSGGGAtvEIHREKGGNPDVDV-AYQYLSFFLDDDA--KLQELHDNYKSGTLL 352
                   *99999****999777********************9998616778777799**************.***********99..9************** PP

                   HHHHHHHHHHHHHHH CS
  tRNA-synt_1b 277 ggdlkkalaealnel 291
                    g+lk +  + l+e+
    EPX74478.1 353 TGQLKAECIKILQEV 367
                   *****9988887765 PP

>> NIF  NLI interacting factor-like phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   1.5e-06     0.013      66     130 ..     119     183 ..     115     194 .. 0.90

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.5e-06
         NIF  66 vidildpekkllshrlyrescvkk.kgeyvKdLsllgrdlsrvvivDdspdsfelqpengipiksf 130
                 vi++ d ek l+++ l+ e+c  +  +e  Kd+   g d ++++i+ +++++  +  +n+++i++ 
  EPX74478.1 119 VIQMTDDEKFLFKQNLSLEECQ-RfARENAKDIIACGFDPKKTLIFANTQYVGGAFYQNIVRISKC 183
                 89999****************5.4499**********************************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (395 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       518  (0.0288917); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 2739.04
//
Query:       EPX74479.1  [L=533]
Description: RNA-binding protein Nrd1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-34  117.7   0.1    2.1e-12   46.6   0.0    4.4  4  RRM_1         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
    1.7e-13   50.2   0.0     0.0036   17.1   0.0    4.2  4  RRM_occluded  Occluded RNA-recognition motif
    3.9e-05   23.6   0.3        2.2    8.3   0.0    3.9  4  Nup35_RRM_2   Nup53/35/40-type RNA recognition motif
    0.00017   21.3   3.1    0.00058   19.5   3.1    2.0  1  RRM           Putative RRM domain
     0.0007   19.6   0.0      0.025   14.6   0.1    2.2  2  RRM_3         RNA binding motif
     0.0045   17.1   0.0       0.26   11.4   0.0    3.1  3  RRM_7         RNA recognition motif
     0.0061   16.4   0.0        0.2   11.4   0.0    2.3  2  DUF4523       Protein of unknown function (DUF4523)


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   4.1e-07     0.001       1      60 [.     122     175 ..     122     182 .. 0.91
   2 !   46.6   0.0   8.4e-16   2.1e-12       1      60 [.     213     267 ..     213     273 .. 0.97
   3 !   10.3   0.0   0.00019      0.48       1      69 [.     329     393 ..     329     394 .. 0.83
   4 !   36.3   0.2   1.4e-12   3.6e-09       1      60 [.     420     474 ..     420     484 .. 0.93

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 4.1e-07
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHT CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealn 60 
                 ++VgnLp+ +  +e+     + Gpi+s+ + ++     k++af+ F ++  A++ l++ +
  EPX74479.1 122 VYVGNLPSGTPIDEILS-CVHTGPIESAWILPE-----KNCAFISFLDPTHATAFLQESH 175
                 8**************97.6789**********8.....*****************99755 PP

  == domain 2  score: 46.6 bits;  conditional E-value: 8.4e-16
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHT CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealn 60 
                 +f+gnLp+ +t+ee++e +++fGpi  ik+v d     k++afV F +  +A kA+++l 
  EPX74479.1 213 VFLGNLPSGITDEEIREDLEPFGPIDQIKIVVD-----KNIAFVHFLNIAAAIKAVQNLP 267
                 79*******************************.....*******************996 PP

  == domain 3  score: 10.3 bits;  conditional E-value: 0.00019
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHH..HHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAle..alngkklggrel 69 
                 +++gn++ d+t ee+    ++ G   +i+  ++     k ++fV+F ++ +A +  e  + ng  +++r+l
  EPX74479.1 329 VYIGNIHADTTIEEICNTVRG-GLLHNIRFLPE-----KHICFVTFVDPVSAYRFFEltSINGLVIRNRRL 393
                 799999999999999999886.889999*9997.....**************9986522567777777766 PP

  == domain 4  score: 36.3 bits;  conditional E-value: 1.4e-12
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHT CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealn 60 
                 +++gn   ++t e Lk+ F+++G+i+ i+l+r+     k++afV+F+s ++A  Ale+  
  EPX74479.1 420 IYIGNADDSLTVERLKQDFEEYGEIEYINLFRE-----KNCAFVNFTSISNAIYALECIK 474
                 8*******************************8.....******************9765 PP

>> RRM_occluded  Occluded RNA-recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0    0.0015       3.8      14      53 ..     132     169 ..     120     189 .. 0.74
   2 !   17.1   0.0   1.4e-06    0.0036       6      55 ..     215     263 ..     211     280 .. 0.90
   3 !    5.9   0.0    0.0046        12      15      71 ..     337     396 ..     327     399 .. 0.86
   4 !   14.3   0.0   1.1e-05     0.028       2      51 ..     418     466 ..     417     487 .. 0.90

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0015
  RRM_occluded  14 nkariralveekegeikkivLvpdheGAivefkdekiagk 53 
                     ++i + v++  g+i+   + p++++A++ f d ++a  
    EPX74479.1 132 PIDEILSCVHT--GPIESAWILPEKNCAFISFLDPTHATA 169
                   44455555444..7********************999865 PP

  == domain 2  score: 17.1 bits;  conditional E-value: 1.4e-06
  RRM_occluded   6 llplsDtvnkariralveekegeikkivLvpdheGAivefkdekiagkas 55 
                   l +l+  +++++ir+ +e+  g+i++i +v d++ A+v f + ++a ka+
    EPX74479.1 215 LGNLPSGITDEEIREDLEPF-GPIDQIKIVVDKNIAFVHFLNIAAAIKAV 263
                   6799****************.***********************999987 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.0046
  RRM_occluded  15 kariralveeke.geikkivLvpdheGAivefkdekiagka..sLaLdgsefegkklrcG 71 
                   ++ i++++++ + g +++i   p+++ ++v f d  +a +   + +++g  + +++l++G
    EPX74479.1 337 DTTIEEICNTVRgGLLHNIRFLPEKHICFVTFVDPVSAYRFfeLTSINGLVIRNRRLKIG 396
                   6789999999954999*********************99973346899999999999998 PP

  == domain 4  score: 14.3 bits;  conditional E-value: 1.1e-05
  RRM_occluded   2 rtisllplsDtvnkariralveekegeikkivLvpdheGAivefkdekia 51 
                   r i + +  D  + +r+++ +ee+ gei+ i L+ ++++A+v f++ + a
    EPX74479.1 418 RNIYIGNADDSLTVERLKQDFEEY-GEIEYINLFREKNCAFVNFTSISNA 466
                   56778888999*************.*******************997765 PP

>> Nup35_RRM_2  Nup53/35/40-type RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.95   2.4e+03      34      49 ..     152     167 ..     138     168 .. 0.75
   2 !    8.3   0.0   0.00086       2.2      16      53 .]     226     263 ..     220     263 .. 0.89
   3 ?    3.5   0.0     0.028        71      27      49 ..     352     374 ..     340     376 .. 0.82
   4 !    6.5   0.2    0.0033       8.5      21      50 ..     438     467 ..     437     470 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.95
  Nup35_RRM_2  34 kevsvmyvkfesekda 49 
                  +e++ +++ f ++  a
   EPX74479.1 152 PEKNCAFISFLDPTHA 167
                  799*******998765 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00086
  Nup35_RRM_2  16 lVlehFasfGeIvkhyvpkevsvmyvkfesekdaekAL 53 
                  +++e ++ fG+I+++ +   +++++v f +  +a kA+
   EPX74479.1 226 EIREDLEPFGPIDQIKIVVDKNIAFVHFLNIAAAIKAV 263
                  66777889******999988**********99999997 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.028
  Nup35_RRM_2  27 Ivkhyvpkevsvmyvkfesekda 49 
                   +++ + +e+++ +v+f ++++a
   EPX74479.1 352 LHNIRFLPEKHICFVTFVDPVSA 374
                  45566669*************98 PP

  == domain 4  score: 6.5 bits;  conditional E-value: 0.0033
  Nup35_RRM_2  21 FasfGeIvkhyvpkevsvmyvkfesekdae 50 
                  F+++GeI  ++  +e++ ++v f s  +a 
   EPX74479.1 438 FEEYGEIEYINLFREKNCAFVNFTSISNAI 467
                  99*********************9877665 PP

>> RRM  Putative RRM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   3.1   2.2e-07   0.00058      16      38 ..      46      68 ..      40      84 .. 0.83

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 2.2e-07
         RRM 16 sLLPShLLvgSPFissPnlpsqy 38
                 LLP  LLvgSPF++sP+  +++
  EPX74479.1 46 ALLPTGLLVGSPFVQSPTSYTPM 68
                69*************99765554 PP

>> RRM_3  RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0     0.062   1.6e+02      10      57 ..     219     266 ..     212     276 .. 0.88
   2 !   14.6   0.1   9.6e-06     0.025       9      58 ..     425     474 ..     420     485 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.062
                 SSS--HHHHHHHCHCCS-ECEEEE-TTSSEEEEEESSHHHHHHHHHHH CS
       RRM_3  10 nkelsredikellsklgevayvdyekgdkegevrFkedeeakkaleka 57 
                  + ++ e+i+e l+ +g++  +    +++ + v F +  +a ka++++
  EPX74479.1 219 PSGITDEEIREDLEPFGPIDQIKIVVDKNIAFVHFLNIAAAIKAVQNL 266
                 5678899******************************99999998876 PP

  == domain 2  score: 14.6 bits;  conditional E-value: 9.6e-06
                 -SSS--HHHHHHHCHCCS-ECEEEE-TTSSEEEEEESSHHHHHHHHHHHH CS
       RRM_3   9 lnkelsredikellsklgevayvdyekgdkegevrFkedeeakkalekat 58 
                 +++ l++e++k+ ++++ge++y+++ ++++ + v F + ++a  ale  +
  EPX74479.1 425 ADDSLTVERLKQDFEEYGEIEYINLFREKNCAFVNFTSISNAIYALECIK 474
                 567889*******************************9999988877655 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.0    0.0001      0.26       2      28 ..     211     237 ..     210     242 .. 0.93
   2 ?   -1.1   0.0      0.81   2.1e+03       2      23 ..     327     348 ..     326     362 .. 0.90
   3 ?    1.4   0.0      0.14   3.6e+02       1      28 [.     417     444 ..     417     472 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.0001
       RRM_7   2 rkvFvGGlPiDiteeelkatfkefgkv 28 
                 r vF+G lP  it+ee+ + ++ fg++
  EPX74479.1 211 RNVFLGNLPSGITDEEIREDLEPFGPI 237
                 78***********************86 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.81
       RRM_7   2 rkvFvGGlPiDiteeelkatfk 23 
                 r v++G + +D t ee+ +t++
  EPX74479.1 327 RTVYIGNIHADTTIEEICNTVR 348
                 679***********99999875 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.14
       RRM_7   1 srkvFvGGlPiDiteeelkatfkefgkv 28 
                 sr +++G     +t e lk+ f+e+g++
  EPX74479.1 417 SRNIYIGNADDSLTVERLKQDFEEYGEI 444
                 89999**99999**************86 PP

>> DUF4523  Protein of unknown function (DUF4523)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.0   7.9e-05       0.2     103     148 ..     223     269 ..     213     279 .. 0.84
   2 ?    2.3   0.0      0.05   1.3e+02     102     157 ..     429     485 ..     420     489 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 7.9e-05
     DUF4523 103 dlksviqrLsvfGpiesvt.lcGrqsavvvfkdiisackavsafqsr 148
                 + + + + L  fGpi+ +  ++ ++ a v f +i++a kav+ ++s+
  EPX74479.1 223 TDEEIREDLEPFGPIDQIKiVVDKNIAFVHFLNIAAAIKAVQNLPSN 269
                 567788999******99961578999****************99987 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.05
     DUF4523 102 edlksviqrLsvfGpiesvtlcG.rqsavvvfkdiisackavsafqsrtpgtmlqCs 157
                 ++++ + q    +G+ie + l   ++ a v f  i  a  a + +++++  + ++ s
  EPX74479.1 429 LTVERLKQDFEEYGEIEYINLFReKNCAFVNFTSISNAIYALECIKQKSGYENFRIS 485
                 5566667778899****9998752678999999999999999999888877777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (533 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       421  (0.0234815); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.56u 0.30s 00:00:00.86 Elapsed: 00:00:01.03
# Mc/sec: 1560.30
//
Query:       EPX74480.1  [L=639]
Description: palmitoyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-30  106.3  17.6    1.3e-30  106.3  17.6    3.3  3  DHHC      DHHC palmitoyltransferase
    4.1e-28   97.8   0.8    2.7e-11   43.9   0.1    4.0  4  Ank_2     Ankyrin repeats (3 copies)
    5.8e-24   81.6   4.1    1.8e-07   30.9   0.0    6.2  5  Ank_3     Ankyrin repeat
      6e-24   84.1   1.4    1.6e-12   47.7   0.1    4.4  4  Ank_4     Ankyrin repeats (many copies)
    4.8e-22   77.7   2.1    7.2e-07   29.4   0.0    4.6  4  Ank_5     Ankyrin repeats (many copies)
    9.9e-20   70.0   4.6    0.00028   21.2   0.0    5.8  5  Ank       Ankyrin repeat


Domain annotation for each model (and alignments):
>> DHHC  DHHC palmitoyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.4      0.67     2e+03      94     115 ..     258     279 ..     225     297 .. 0.56
   2 ?  -11.1  15.2         6   1.8e+04      68     115 ..     294     336 ..     265     370 .. 0.46
   3 !  106.3  17.6   4.3e-34   1.3e-30       2     130 ..     397     533 ..     396     537 .. 0.94

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.67
        DHHC  94 llsilllvlsllfllllgllll 115
                 +  ++l+++ ++ ++ll++ ++
  EPX74480.1 258 FRICFLTCFPIMGIALLMMSVC 279
                 3334444444444444444333 PP

  == domain 2  score: -11.1 bits;  conditional E-value: 6
        DHHC  68 lllialvklveeekkseflavtllkkllsilllvlsllfllllgllll 115
                 l++ +l++++e++++     v+++      l  ++s +f+ +l++ ++
  EPX74480.1 294 LSSNILIYYIESSSEVNSFFVETPF-----LAGLFSSIFFWVLSYACV 336
                 3444444444444443333333332.....222222222222222211 PP

  == domain 3  score: 106.3 bits;  conditional E-value: 4.3e-34
        DHHC   2 ekelkfCstcniykpprskHcrvCnrcvlrfDHhCpwlnnciGerNykyFllfllylllllilalvlllialvklveeekkseflavtllkk....... 93 
                 ++++++C +c + kp+rs Hc +C+rc++r+DHhCpw+ nc+G +N+k Fl++ l l++l+ ++++l +++l+ +  +ek +++ ++    +       
  EPX74480.1 397 FDQNHYCIKCLQLKPERSFHCLSCGRCIYRYDHHCPWISNCVGMKNHKSFLIYTLLLVILIPVYCYLGFVYLTLIPIQEKYKSYKCLWVGGTicewmlk 495
                 5789*******************************************************************99998888888888777777789***99 PP

        DHHC  94 .llsilllvlsllfllllgllllfhlylilrnlTtiea 130
                  +++i ++++ ++ ++++++l +++l+++++n+Tt e+
  EPX74480.1 496 dMFVINSMFIVCINWIWVLSLSFTQLWQVAHNITTAEY 533
                 99999999999************************997 PP

>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   0.0   1.6e-10   4.9e-07      31      82 ..       5      63 ..       4      64 .. 0.74
   2 !   43.9   0.1     9e-15   2.7e-11       1      83 []      72     164 ..      72     164 .. 0.85
   3 !   33.3   0.1   1.8e-11   5.3e-08       1      74 [.     105     189 ..     105     198 .. 0.77
   4 !   10.3   0.0   0.00028      0.83      19      73 ..     157     225 ..     153     236 .. 0.70

  Alignments for each domain:
  == domain 1  score: 30.2 bits;  conditional E-value: 1.6e-10
       Ank_2 31 hyAakngnleivklLleh.......adndgrtpLhyAarsghleivklLlekgadinlk 82
                ++Aa++g+++ +k   +        +d+ g tpLh+Aa ++++e++++Lle+g+din +
  EPX74480.1  5 FVAASQGDVDSIKNEFQSgssnindIDEGGATPLHWAALNQQFEVCDYLLENGIDINST 63
                5677777665554333324445444558899**************************87 PP

  == domain 2  score: 43.9 bits;  conditional E-value: 9e-15
       Ank_2   1 LhlAakngnlelvklLl.egadpn..k.ngktaLhyAakngnleivklLleh.......adndgrtpLhyAarsghleivk.lLlekgadinlkd 83 
                 Lh+Aak g  ++v++L+  g dp   + +g   Lh+A+++ n  +v +Ll h        d++ +tpL++A+ +g+ eiv   Ll+ gad++++d
  EPX74480.1  72 LHWAAKRGLVQMVHYLVqRGGDPLmhDsQGFHCLHLAVHSSNAFLVAYLL-HldipvdsPDENQHTPLMWAVYHGN-EIVTnCLLKWGADVHATD 164
                 8*******779******999998665369***********98777*****.54778445559999***********.7776589977****9987 PP

  == domain 3  score: 33.3 bits;  conditional E-value: 1.8e-11
       Ank_2   1 LhlAakn.gnlelvklLlegadpn....k.ngktaLhyAakngnleiv.klLle.....h.adndgrtpLhyAarsghleivklLl.e 74 
                 LhlA+ + +++ lv +Ll + d+     + n +t+L++A+ +gn eiv   Ll+     h +d++ +tpLh++    +l++++l l e
  EPX74480.1 105 LHLAVHSsNAF-LVAYLL-HLDIPvdspDeNQHTPLMWAVYHGN-EIVtNCLLKwgadvHaTDSEEMTPLHWSLVGANLKCMRLILqE 189
                 89****74655.999999.3333232333699***********8.8876999987765547779999*******88899****99944 PP

  == domain 4  score: 10.3 bits;  conditional E-value: 0.00028
       Ank_2  19 gadpn..k.ngktaLhyAakngnleivklLleh.........ad..ndgrtpLhyAarsghleivklLl 73 
                 gad++  + +++t+Lh++  + nl++++l+l++         a+   + +tp  ++++ g ++i+k  l
  EPX74480.1 157 GADVHatDsEEMTPLHWSLVGANLKCMRLILQEcglpetmavANlsGQVKTPWSLSIELGVSKIFKEAL 225
                 67887753699*********9999*******96666666666553333448888888777777777666 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.9   0.0   5.9e-11   1.8e-07       2      30 ..      34      61 ..      33      62 .. 0.96
   2 !   20.6   0.0   1.3e-07    0.0004       2      29 ..      68      94 ..      67      96 .. 0.94
   3 ?    5.2   0.1     0.014        42       2      29 ..     101     127 ..     100     129 .. 0.85
   4 !   16.8   0.0   2.2e-06    0.0067       1      31 []     133     162 ..     133     162 .. 0.92
   5 ?    3.8   0.0     0.038   1.1e+02       3      26 ..     168     191 ..     166     193 .. 0.87

  Alignments for each domain:
  == domain 1  score: 30.9 bits;  conditional E-value: 5.9e-11
       Ank_3  2 GetpLhlAarsgnleivkfLlenkgadvn 30
                G tpLh+Aa+++ +e++++Lle +g+d+n
  EPX74480.1 34 GATPLHWAALNQQFEVCDYLLE-NGIDIN 61
                89********************.8****9 PP

  == domain 2  score: 20.6 bits;  conditional E-value: 1.3e-07
       Ank_3  2 GetpLhlAarsgnleivkfLlenkgadv 29
                G tpLh+Aa+ g + +v++L++ +g d+
  EPX74480.1 68 GATPLHWAAKRGLVQMVHYLVQ-RGGDP 94
                89********************.99997 PP

  == domain 3  score: 5.2 bits;  conditional E-value: 0.014
       Ank_3   2 GetpLhlAarsgnleivkfLlenkgadv 29 
                 G   LhlA++s n  +v +Ll    ++v
  EPX74480.1 101 GFHCLHLAVHSSNAFLVAYLLH-LDIPV 127
                 6678**********99999998.77776 PP

  == domain 4  score: 16.8 bits;  conditional E-value: 2.2e-06
       Ank_3   1 nGetpLhlAarsgnleivkfLlenkgadvna 31 
                 n+ tpL++A+ +gn  +   Ll+ +gadv+a
  EPX74480.1 133 NQHTPLMWAVYHGNEIVTNCLLK-WGADVHA 162
                 578*************9999999.****985 PP

  == domain 5  score: 3.8 bits;  conditional E-value: 0.038
       Ank_3   3 etpLhlAarsgnleivkfLlenkg 26 
                 +tpLh+ +  +nl+ ++++l+++g
  EPX74480.1 168 MTPLHWSLVGANLKCMRLILQECG 191
                 7*****999999999**9999776 PP

>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0   1.3e-07   0.00039       5      55 .]       4      54 ..       1      54 [. 0.92
   2 !   47.7   0.1   5.3e-16   1.6e-12       3      55 .]      36      88 ..      34      88 .. 0.97
   3 !   23.2   0.2   2.5e-08   7.3e-05       4      51 ..     104     150 ..     102     154 .. 0.90
   4 !    8.3   0.0    0.0012       3.4      24      53 ..     157     185 ..     152     187 .. 0.84

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 1.3e-07
       Ank_4  5 LhyaaisgrlelvrlLlekg.adinaqdnrsGetalhiAakrgnveilklLl 55
                ++ aa++g++++++  +++g  +in   ++ G t+lh Aa++ ++e+  +Ll
  EPX74480.1  4 IFVAASQGDVDSIKNEFQSGsSNINDI-DEGGATPLHWAALNQQFEVCDYLL 54
                79999*********999**6477***8.**********************98 PP

  == domain 2  score: 47.7 bits;  conditional E-value: 5.3e-16
       Ank_4  3 taLhyaaisgrlelvrlLlekgadinaqdnrsGetalhiAakrgnveilklLl 55
                t+Lh+aa  +++e++++Lle+g+din ++ + G t+lh Aakrg v+++++L+
  EPX74480.1 36 TPLHWAALNQQFEVCDYLLENGIDINSTAGDLGATPLHWAAKRGLVQMVHYLV 88
                89**************************9999*******************96 PP

  == domain 3  score: 23.2 bits;  conditional E-value: 2.5e-08
       Ank_4   4 aLhyaaisgrlelvrlLlekgadinaqdnrsGetalhiAakrgnveil 51 
                 +Lh a++s++  lv++Ll  ++ ++   ++++ t+l  A+++gn  ++
  EPX74480.1 104 CLHLAVHSSNAFLVAYLLHLDIPVDSP-DENQHTPLMWAVYHGNEIVT 150
                 8*****************99******8.****************6555 PP

  == domain 4  score: 8.3 bits;  conditional E-value: 0.0012
       Ank_4  24 gadinaqdnrsGetalhiAakrgnveilkl 53 
                 gad++a+ +++ +t+lh  + + n+++ +l
  EPX74480.1 157 GADVHAT-DSEEMTPLHWSLVGANLKCMRL 185
                 99*****.**********998888888776 PP

>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4   0.0   2.4e-10   7.2e-07       6      45 ..      24      63 ..      21      67 .. 0.92
   2 !   26.5   0.0     2e-09   5.8e-06      16      56 .]      68     108 ..      63     108 .. 0.92
   3 !   17.2   0.1   1.6e-06    0.0047       1      53 [.     120     171 ..     120     172 .. 0.90
   4 !    8.0   0.0    0.0012       3.7       5      36 ..     157     187 ..     153     196 .. 0.81

  Alignments for each domain:
  == domain 1  score: 29.4 bits;  conditional E-value: 2.4e-10
       Ank_5  6 padvnrldgggntpLhvAakygaadvvrlLlargadlnlt 45
                + ++n+ d+gg tpLh+Aa ++ ++v+ +Ll++g d+n t
  EPX74480.1 24 SSNINDIDEGGATPLHWAALNQQFEVCDYLLENGIDINST 63
                6799*********************************976 PP

  == domain 2  score: 26.5 bits;  conditional E-value: 2e-09
       Ank_5  16 gntpLhvAakygaadvvrlLlargadlnltdsrGltaldlA 56 
                 g tpLh+Aak+g  ++v +L+ rg d+ + ds+G   l+lA
  EPX74480.1  68 GATPLHWAAKRGLVQMVHYLVQRGGDPLMHDSQGFHCLHLA 108
                 67********************************8888776 PP

  == domain 3  score: 17.2 bits;  conditional E-value: 1.6e-06
       Ank_5   1 Llehg.padvnrldgggntpLhvAakygaadvvrlLlargadlnltdsrGltal 53 
                 Ll+ + p+d  +++++  tpL++A+++g+  v + Ll+ gad  +tds+  t+l
  EPX74480.1 120 LLHLDiPVDSPDENQH--TPLMWAVYHGNEIVTNCLLKWGADVHATDSEEMTPL 171
                 7788888888888888..***********99999999***********998888 PP

  == domain 4  score: 8.0 bits;  conditional E-value: 0.0012
       Ank_5   5 gpadvnrldgggntpLhvAakygaadvvrlLl 36 
                 g adv ++d + +tpLh++  + ++ ++rl+l
  EPX74480.1 157 G-ADVHATDSEEMTPLHWSLVGANLKCMRLIL 187
                 5.9***************98888888888887 PP

>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   1.1e-06    0.0032       2      29 ..      34      62 ..      33      64 .. 0.90
   2 !   21.2   0.0   9.4e-08   0.00028       2      31 ..      68      98 ..      67      99 .. 0.91
   3 ?    4.8   0.1     0.015        43       2      23 ..     101     122 ..     100     131 .. 0.84
   4 !   17.7   0.0   1.2e-06    0.0035       3      31 ..     135     164 ..     133     165 .. 0.84
   5 !    5.3   0.0      0.01        30       2      24 ..     167     191 ..     166     201 .. 0.73

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 1.1e-06
                SBBHHHHHHHHTTHHHHHHHH.TTTSTTC CS
         Ank  2 GnTPLHlAatngkkriiklLL.hGAnlna 29
                G TPLH+Aa n + +++ +LL +G ++n+
  EPX74480.1 34 GATPLHWAALNQQFEVCDYLLeNGIDINS 62
                78*******888899******99***997 PP

  == domain 2  score: 21.2 bits;  conditional E-value: 9.4e-08
                SBBHHHHHHHHTTHHHHHHHH.TTTSTTCBT CS
         Ank  2 GnTPLHlAatngkkriiklLL.hGAnlnald 31
                G TPLH+Aa +g ++++++L+ +G ++ ++d
  EPX74480.1 68 GATPLHWAAKRGLVQMVHYLVqRGGDPLMHD 98
                78*******************7677*99998 PP

  == domain 3  score: 4.8 bits;  conditional E-value: 0.015
                 SBBHHHHHHHHTTHHHHHHHHT CS
         Ank   2 GnTPLHlAatngkkriiklLLh 23 
                 G+ +LHlA++  ++  + +LLh
  EPX74480.1 101 GFHCLHLAVHSSNAFLVAYLLH 122
                 8999*****8888889999985 PP

  == domain 4  score: 17.7 bits;  conditional E-value: 1.2e-06
                 BBHHHHHHHHTTHHHHHHHH.TTTSTTCBT CS
         Ank   3 nTPLHlAatngkkriiklLL.hGAnlnald 31 
                 +TPL++A++ g++ ++  LL  GA+++a+d
  EPX74480.1 135 HTPLMWAVYHGNEIVTNCLLkWGADVHATD 164
                 7*******88888888889955******99 PP

  == domain 5  score: 5.3 bits;  conditional E-value: 0.01
                 SBBHHHHHHHHTTHHHHHHHH..TT CS
         Ank   2 GnTPLHlAatngkkriiklLL..hG 24 
                  +TPLH+   ++++ + +l+L  +G
  EPX74480.1 167 EMTPLHWSLVGANLKCMRLILqeCG 191
                 58****9656666669998885445 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (639 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       895  (0.0499191); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.65u 0.28s 00:00:00.93 Elapsed: 00:00:00.46
# Mc/sec: 4215.15
//
Query:       EPX74481.1  [L=494]
Description: GTPase like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.8e-06   27.4   0.0    5.6e-06   26.4   0.0    1.5  1  MMR_HSR1     50S ribosome-binding GTPase
  ------ inclusion threshold ------
      0.024   14.6   0.1      0.075   12.9   0.1    1.8  1  RsgA_GTPase  RsgA GTPase
       0.13   12.6   0.0       0.27   11.6   0.0    1.5  1  AAA_16       AAA ATPase domain
       0.15   12.6   0.1       0.38   11.3   0.1    1.7  1  ABC_tran     ABC transporter
       0.15   12.1   0.0       0.28   11.2   0.0    1.4  1  MTS_N        Methyltransferase small domain N-terminal
       0.17   11.3   0.0       0.39   10.1   0.0    1.5  2  TniB         Bacterial TniB protein


Domain annotation for each model (and alignments):
>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   0.0   1.9e-09   5.6e-06       2      58 ..     212     280 ..     211     349 .. 0.74

  Alignments for each domain:
  == domain 1  score: 26.4 bits;  conditional E-value: 1.9e-09
                 EEEEESTTSSHHHHHHHHHT.......STEEESSSTTSSSSEEEEEEE.....ETT.EEEEEEECGGCSS CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltg.......ekaivsdkpgtTrdinegrvk.....lkg.keielvDtpGlie 58 
                 v i+G  N+GKS+Li++  +       e +  s  pgtT++   ++ +     + g ++ +++DtpG ++
  EPX74481.1 212 VYIIGEANSGKSSLIQSFAKygnglvnELSMESLLPGTTLKYMPFTASsfgkaFTGlENGKVIDTPG-YS 280
                 89**************9996555555367888999********99988777774444778*******.53 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   2.5e-05     0.075      85     162 ..     194     280 ..     142     283 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2.5e-05
                  TTHTTHHHHHHHCTT.SEEEEECSTTSSHHHHHHHHCTT-----S--------------SEEEEEETT.........TEEEESS-SSS CS
  RsgA_GTPase  85 ktkegleelkellkd.ktsvlvGqSGvGKStLinallpelelktgevseklgrGkhTTtavellelae.........gglliDtPGfr 162
                  + +e l+++++ lk    + ++G+   GKS+Li +++   +  ++e+s ++     TT +   +  ++         +g +iDtPG +
   EPX74481.1 194 TMRELLSSIQPFLKPgGHVYIIGEANSGKSSLIQSFAKYGNGLVNELSMESLLPG-TTLKYMPFTASSfgkaftgleNGKVIDTPGYS 280
                  23466788999999878999******************99999***998765543.333333232222233444455999*****976 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   8.9e-05      0.27      10      46 ..     196     231 ..     189     266 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 8.9e-05
      AAA_16  10 eqLlsalervrsgrpelvllsGesGvGKsslvrellr 46 
                 ++Lls +++  +++ + v+++Ge+ +GKssl++++++
  EPX74481.1 196 RELLSSIQPFLKPG-GHVYIIGEANSGKSSLIQSFAK 231
                 55555566555555.89*****************997 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   0.00013      0.38       8      33 ..     206     231 ..     199     250 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00013
                 EETTSEEEEEESTTSSHHHHHHHHTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   8 lkegekvaivGenGaGKStLlkllag 33 
                 lk+g  v i+Ge  +GKS+L++ +a+
  EPX74481.1 206 LKPGGHVYIIGEANSGKSSLIQSFAK 231
                 899******************99875 PP

>> MTS_N  Methyltransferase small domain N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   9.5e-05      0.28      84     123 ..     194     233 ..     173     238 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 9.5e-05
                 HHHHHHHHHHTTS-TT-EEEEEEEGGGTGGGHHHHHTTTS CS
       MTS_N  84 eakylLalllsklkkgteilvVGenksGvksaekllaeyl 123
                  ++ lL+++ + lk+g++++++Ge  sG  s  + +a+y+
  EPX74481.1 194 TMRELLSSIQPFLKPGGHVYIIGEANSGKSSLIQSFAKYG 233
                 566789999**********************999999997 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00013      0.39      36      57 ..     210     231 ..     185     244 .. 0.75
   2 ?   -4.1   0.0         3   8.9e+03      85     110 ..     382     407 ..     376     409 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00013
        TniB  36 pnlllvGdsnnGKtmivekFar 57 
                  +++++G+ n GK++++++Fa+
  EPX74481.1 210 GHVYIIGEANSGKSSLIQSFAK 231
                 5799****************97 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 3
        TniB  85 rlyaaiLealgaplkararvskleqq 110
                  l a+i+++l   ++++++++kleq+
  EPX74481.1 382 PLLAKIFTTLPFHVSSTEKIKKLEQK 407
                 57788999999999999999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (494 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       593  (0.0330749); expected 358.6 (0.02)
Passed bias filter:                      561  (0.0312901); expected 358.6 (0.02)
Passed Vit filter:                        85  (0.00474092); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.61u 0.27s 00:00:00.88 Elapsed: 00:00:00.44
# Mc/sec: 3409.08
//
Query:       EPX74482.1  [L=581]
Description: SWI/SNF complex subunit Snf5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.1e-69  233.4   0.0    4.2e-69  232.9   0.0    1.2  1  SNF5      SNF5 / SMARCB1 / INI1


Domain annotation for each model (and alignments):
>> SNF5  SNF5 / SMARCB1 / INI1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  232.9   0.0   2.4e-73   4.2e-69       1     237 []      99     349 ..      99     349 .. 0.86

  Alignments for each domain:
  == domain 1  score: 232.9 bits;  conditional E-value: 2.4e-73
        SNF5   1 qaekpetLvPiridldidkyrlrDtFlwNlhetlitpeqFaqtlveDldlpeea.avveeiskqireqleeyagvalhel.asekkesatpae.kkese 96 
                 qae+p+ LvPir+++d+d+y+lrD+F+wN+ ++++  ++Fa++l+ D+d+p ++ +++++isk+i++q+++y  +  + l +s + + ++p + ++ s 
  EPX74482.1  99 QAELPVDLVPIRLEIDADRYKLRDSFTWNVYDKCVPLDVFAEQLCLDYDIPPNHmHMAQNISKSIQSQIQDYRPIR-QALdSSLQAKLEDPFQrRHLSL 196
                 89*************************************************8889*****************4443.3342222333333333366777 PP

        SNF5  97 edtpkakiseeeekeekenkddelRvlikldiqigsklltDkfEWdllsplntpEeFAkqlcadlgLsgefvtaiaHaIrEqvlkykksllesgllvag 195
                 ++ +++++s++++++e +n + +lR +++ldi+ig+ +l+D+fEWdl sp++++EeFA+++c dlgLsg+f+tai+H+IrEq+++y ksl+ +g    g
  EPX74482.1 197 SEGVSTDVSANTRNDEVSNCNTDLRFMVNLDITIGRLNLVDQFEWDLFSPSGSAEEFASVMCFDLGLSGDFCTAISHSIREQSQMYLKSLVLVGYTFDG 295
                 777778888887778889*************************************************************************77777776 PP

        SNF5 196 lkk............leagwrfdeelaeefepkleelskeelekrekerereir 237
                  +             l+  +r ++ +a++++p ++els++e+e++++  +re+r
  EPX74482.1 296 KEIddeeirsfmlpsLKEAFRWKDMNAKSYSPMVYELSDAEMERQDRGYDREAR 349
                 555556655555444477777666689************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (581 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       548  (0.030565); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 4046.07
//
Query:       EPX74483.1  [L=592]
Description: Clr6 histone deacetylase associated PHD protein- 2 Cph2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.6e-16   58.4  25.2    5.1e-11   42.3   8.7    2.6  2  PHD            PHD-finger
  ------ inclusion threshold ------
        1.7    8.9  10.5        1.7    8.8   2.3    2.6  2  zf-HC5HC2H_2   PHD-zinc-finger like domain


Domain annotation for each model (and alignments):
>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.3   8.7   5.7e-15   5.1e-11       1      50 [.     246     291 ..     246     293 .. 0.96
   2 !   21.5   8.5   1.8e-08   0.00016       2      48 ..     391     437 ..     390     439 .. 0.91

  Alignments for each domain:
  == domain 1  score: 42.3 bits;  conditional E-value: 5.7e-15
                 SBTTTTSTTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSSTBSSTTTH CS
         PHD   1 rCavCkkksdeeeelvqCdgCkrwfHqkClkppleseekpegewlCekCk 50 
                 +C++C++    ++++++C++C ++fH +C++pp e+++ p+g w+C++C+
  EPX74483.1 246 FCSACHG----SGNFLCCETCPNSFHFSCIDPPIEETNLPDGAWYCNSCR 291
                 6999999....9*************************************8 PP

  == domain 2  score: 21.5 bits;  conditional E-value: 1.8e-08
                 BTTTTSTTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSSTBSSTT CS
         PHD   2 CavCkkksdeeeelvqCdgCkrwfHqkClkppleseekpegewlCek 48 
                 C  C+++    + +v+Cd C +  H++Cl+ppl++ + + ++w C++
  EPX74483.1 391 CYHCQSSVLPCQSMVVCDYCLTYWHPDCLSPPLSTLPSSVRKWKCPN 437
                 999999777799**********************8888888****85 PP

>> zf-HC5HC2H_2  PHD-zinc-finger like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   2.3   0.00019       1.7      47      85 ..     236     271 ..     210     279 .. 0.79
   2 ?    4.2   1.3    0.0053        48      56      85 ..     389     419 ..     367     435 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00019
  zf-HC5HC2H_2  47 ekikkerlkekCllCkkrkGaciqCskkeCktafHvtCa 85 
                   ++++ +  ++ C+ C+  +G  + C +  C ++fH  C+
    EPX74483.1 236 QEYTYRYNNDFCSACHG-SGNFLCCET--CPNSFHFSCI 271
                   445555567889***98.598888887..*********7 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.0053
  zf-HC5HC2H_2  56 ekCllCkkr...kGaciqCskkeCktafHvtCa 85 
                    +C+ C+++      ++ C +  C t++H+ C 
    EPX74483.1 389 VHCYHCQSSvlpCQSMVVCDY--CLTYWHPDCL 419
                   589999998665555667777..*********6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (592 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       922  (0.0514251); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.31s 00:00:00.96 Elapsed: 00:00:00.50
# Mc/sec: 3550.20
//
Query:       EPX74484.1  [L=502]
Description: DNA polymerase Xfamily [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.5e-20   72.7   0.2    1.9e-19   69.2   0.4    2.2  2  DNA_pol_lambd_f  Fingers domain of DNA polymerase lambda
    2.2e-14   53.4   0.2    6.4e-14   51.9   0.0    1.9  2  DNA_pol_B_thumb  DNA polymerase beta thumb
    3.2e-12   46.6   0.0      7e-12   45.5   0.0    1.6  1  HHH_8            Helix-hairpin-helix domain
    1.4e-07   31.7   0.0    2.5e-07   30.9   0.0    1.4  1  DNA_pol_B_palm   DNA polymerase beta palm
  ------ inclusion threshold ------
      0.073   13.7   0.0         16    6.2   0.0    2.6  2  HHH_5            Helix-hairpin-helix domain


Domain annotation for each model (and alignments):
>> DNA_pol_lambd_f  Fingers domain of DNA polymerase lambda
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.14     5e+02       3      17 ..     222     236 ..     220     239 .. 0.83
   2 !   69.2   0.4   5.2e-23   1.9e-19       2      49 ..     262     309 ..     261     310 .. 0.97

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.14
  DNA_pol_lambd_f   3 FtkvyGVGpktAkkw 17 
                      ++k  G+Gpk+A+ w
       EPX74484.1 222 LSKLPGCGPKIAHLW 236
                      56778*******999 PP

  == domain 2  score: 69.2 bits;  conditional E-value: 5.2e-23
  DNA_pol_lambd_f   2 lFtkvyGVGpktAkkwyakGirtledlrakrakLtreqqiGlkyyeDl 49 
                      lF++++GVG+++A +wy+kG+rt+e++r++++++t++ q+Gl+yyeD+
       EPX74484.1 262 LFYNIFGVGAAKALEWYQKGWRTVEEVRKHKDTFTKQIQVGLEYYEDF 309
                      8****************************99****************9 PP

>> DNA_pol_B_thumb  DNA polymerase beta thumb
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.2       1.6   5.7e+03      37      56 ..     128     149 ..      99     150 .. 0.46
   2 !   51.9   0.0   1.8e-17   6.4e-14       1      70 []     428     500 ..     428     500 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 1.6
                      ...ETCCCEEE.C-.SSHHHHH CS
  DNA_pol_B_thumb  37 kaeddddgelv.ev.etErdvf 56 
                      ++++++++  + ++ e+E +v+
       EPX74484.1 128 DDSKERSKAEIeASqECENQVY 149
                      1222222223322347777776 PP

  == domain 2  score: 51.9 bits;  conditional E-value: 1.8e-17
                      HHHHHHS-HHHHHHHHHHHHCTTEEEETTEEE.......ETCCCEEE..........C-SSHHHHHHHCTS----GGGTT CS
  DNA_pol_B_thumb   1 allyfTGsktFnrdlRrlakkkglkLnssglrdekgkaeddddgelv..........evetErdvfelLglpyipPeeRe 70 
                      a+l+++G+  F rdl+ +a++++l+ +s  ++       d ++g+++          +v++Erdvf+lL+l+yi+P+ R+
       EPX74484.1 428 AVLGWSGGIFFLRDLKVYANERQLSVDSFDIT-------DLKTGKDIcpttfgewkdPVSAERDVFHLLQLDYIEPKYRN 500
                      89******************************.......89999988888888888899********************7 PP

>> HHH_8  Helix-hairpin-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.5   0.0     2e-15     7e-12       1      66 [.     176     239 ..     176     241 .. 0.95

  Alignments for each domain:
  == domain 1  score: 45.5 bits;  conditional E-value: 2e-15
                 HHHHHHHHHHHHHHHHHCT--CCCHHHHHHHHCCCCC-SS-HHHHTTHCTTSTT--HHHHHHHHHH CS
       HHH_8   1 NkeiadaLeeladllelkgedpfrvraYrrAaraiealpeeitsleeeltklpgiGkkiaakieei 66 
                 N+++++ Le l   +e++ ++++r+raY  A+++i++lp +i+++e  l+klpg+G+kia  ++e+
  EPX74484.1 176 NQDFVSSLEVLKLCREVN-GESMRARAYGMAISSIKSLPVKIDDGEF-LSKLPGCGPKIAHLWREF 239
                 89999*************.899**********************998.*************99998 PP

>> DNA_pol_B_palm  DNA polymerase beta palm
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.9   0.0     7e-11   2.5e-07       6     113 ..     317     421 ..     313     422 .. 0.67

  Alignments for each domain:
  == domain 1  score: 30.9 bits;  conditional E-value: 7e-11
                     HHHHHHHHHHHHHHHH-TT-EEEE-HHHHTT-SEESSEEEEEEBTTBSTTSS--HHHHHHHHHHHHHTTSEEEEEE.....E-.SSEEEEEEE-- CS
  DNA_pol_B_palm   6 EvealealvkkaakeldpevevivcGSYRRgaessGDvDvlitkkdakseskklkklleklvkklkkkgfltdsLav...esg.eskfmGvcrlp 96 
                     E++++ ++v +++ +  + v+   +G +RRg+    D+D++++ + a++    +++l+++l++ lk+ +f  + ++v   + g ++ ++ ++++ 
      EPX74484.1 317 EATNIYRTVLASLPDAIQ-VHSCLVGGFRRGKPVGADIDMVLSPSPAHT----TNHLFNALLEILKQ-EFSFNLISVqehSCGgKKGYVILAVIL 405
                     444444444444443333.44455688****************999888....45788888887776.444444444322333577788888888 PP

                     -SSSTS-EEEEEEEEE- CS
  DNA_pol_B_palm  97 eeekkelhrRiDlklvp 113
                     + +++++hrRiD+ +vp
      EPX74484.1 406 S-PESNIHRRIDIIVVP 421
                     8.569**********98 PP

>> HHH_5  Helix-hairpin-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0    0.0045        16      33      52 ..     218     237 ..     198     240 .. 0.74
   2 ?    4.6   0.0     0.014        52       9      30 ..     268     289 ..     261     300 .. 0.85

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0045
                 -HHHHHTSTTS-HHHHHHHH CS
       HHH_5  33 dveeLakipGiGkktAerii 52 
                 d e L+k+pG G+k A  + 
  EPX74484.1 218 DGEFLSKLPGCGPKIAHLWR 237
                 445699********998776 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.014
                 T--HHHHHHHHTTT--SHHHHH CS
       HHH_5   9 GiGpktAlallsaGiesvedla 30 
                 G+G++ Al  + +G+++ve++ 
  EPX74484.1 268 GVGAAKALEWYQKGWRTVEEVR 289
                 9******************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (502 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       899  (0.0501422); expected 358.6 (0.02)
Passed bias filter:                      639  (0.0356406); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.60u 0.28s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 3470.70
//
Query:       EPX74485.1  [L=383]
Description: translation initiation factor eIF5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.5e-38  130.5   0.0    4.5e-38  129.7   0.0    1.4  1  eIF-5_eIF-2B    Domain found in IF2B/IF5
    6.1e-17   61.5   0.7    6.1e-17   61.5   0.7    2.1  2  W2              eIF4-gamma/eIF5/eIF2-epsilon
  ------ inclusion threshold ------
       0.16   11.9   1.3       0.16   11.9   0.1    1.6  2  RNA_POL_M_15KD  RNA polymerases M/15 Kd subunit
       0.18   11.8   0.0       0.37   10.9   0.0    1.5  1  DNA_ligase_C    DNA ligase C-terminal domain


Domain annotation for each model (and alignments):
>> eIF-5_eIF-2B  Domain found in IF2B/IF5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.7   0.0     1e-41   4.5e-38       2     116 ..       8     128 ..       7     129 .. 0.96

  Alignments for each domain:
  == domain 1  score: 129.7 bits;  conditional E-value: 1e-41
                   .CCCSSSS--SSTT--EEEETT....EEEETTHHHHHHHHTTSHHHHHHHHHHHHTSEEEES.ETTEEEESSSSSCCHHHHHHHHHHHHHTSTSSST CS
  eIF-5_eIF-2B   2 eekedkkerykmpklqvkvegkk...ktvivNfeeiakaLnrdpehvlkyllkelgtqgsid.engrlilngkfeakkleklldkyieeyVlCkeCk 94 
                   ++++d+++ry+mpklq k+egk+   ktvi N++++akaL r+p +++k++++elg+q++i  + +r+i+ng+++a+kl++lld +i+++VlC +C 
    EPX74485.1   8 RDVKDSFYRYQMPKLQSKIEGKGngiKTVIPNMTDVAKALGRPPLYLTKFFGFELGAQTTIVaDMDRYIVNGAHDAAKLQDLLDVFIRRFVLCASCL 104
                   57889*******************************************************9989********************************* PP

                   STCEEECC..SSSCEEEEESSSTC CS
  eIF-5_eIF-2B  95 spetelek..eerllvlkCkaCga 116
                   +petel++  ++++++ +CkaCg 
    EPX74485.1 105 NPETELSInkKDQTITYDCKACGY 128
                   ******9977688888******96 PP

>> W2  eIF4-gamma/eIF5/eIF2-epsilon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1       0.8   3.6e+03      55      69 ..     226     240 ..     186     241 .. 0.55
   2 !   61.5   0.7   1.4e-20   6.1e-17       1      79 []     299     381 ..     299     381 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.8
          W2  55 kkkvrkkaepfvewL 69 
                 + ++ ++  +f +wL
  EPX74485.1 226 DDEADARYDEFGQWL 240
                 345556666666666 PP

  == domain 2  score: 61.5 bits;  conditional E-value: 1.4e-20
          W2   1 eqvallgalerlcaekee.llkllakilkaLYdeDileEeailkWgekkskaekg...kkkvrkkaepfvewLeeaeeeeeee 79 
                 +++a+lg+ erl+++ +  +l  ++k+l + Y++D+++E ++ kWg+k sk+  +   +kk++++a+pf++wL+ea++e+e+e
  EPX74485.1 299 HERAILGGYERLIESTKLqHLDSVSKVLLEIYESDLVSEGTLEKWGAKPSKKYVSretSKKIQESARPFLNWLAEASDESESE 381
                 7899********8665558*****************************999754466799*********************97 PP

>> RNA_POL_M_15KD  RNA polymerases M/15 Kd subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.2       3.5   1.6e+04      24      27 ..     100     103 ..      98     105 .. 0.71
   2 ?   11.9   0.1   3.5e-05      0.16      15      35 ..     113     134 ..     110     135 .. 0.79

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 3.5
                     ESSS CS
  RNA_POL_M_15KD  24 CrqC 27 
                     C++C
      EPX74485.1 100 CASC 103
                     6776 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 3.5e-05
                     ECSCCCE.EEESSSS-EEESSC CS
  RNA_POL_M_15KD  15 edkegkn.feCrqCgYeepadq 35 
                     ++k  ++ ++C  CgY  ++d+
      EPX74485.1 113 NKKDQTItYDCKACGYRGEIDG 134
                     455566779*********9985 PP

>> DNA_ligase_C  DNA ligase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   8.2e-05      0.37      26      65 ..     305     345 ..     291     376 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 8.2e-05
                   -EEEEE-TTS-EEEEB---SHHHHHH.HHHHHHHHTTTS-- CS
  DNA_ligase_C  26 igfevllesgrlvnatnisralmdef.tetvkeatlsqwgf 65 
                    g+e l+es +l     +s+ l++ + ++ v e tl +wg 
    EPX74485.1 305 GGYERLIESTKLQHLDSVSKVLLEIYeSDLVSEGTLEKWGA 345
                   48*********************99835789********95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (383 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       893  (0.0498076); expected 358.6 (0.02)
Passed bias filter:                      586  (0.0326845); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 2609.64
//
Query:       EPX74486.1  [L=464]
Description: mediator complex subunit Pmc2/Med1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      6e-28   98.0   1.2    1.6e-20   73.6   0.1    2.1  2  Med1          Mediator of RNA polymerase II transcription sub
  ------ inclusion threshold ------
       0.19   11.6   3.2        5.6    6.8   0.1    2.2  2  Dynactin_p22  Dynactin subunit p22


Domain annotation for each model (and alignments):
>> Med1  Mediator of RNA polymerase II transcription subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.6   0.1   1.8e-24   1.6e-20      16     197 ..      43     214 ..      31     241 .. 0.90
   2 !   23.5   0.1   2.9e-09   2.6e-05     374     413 ..     325     362 ..     268     363 .. 0.83

  Alignments for each domain:
  == domain 1  score: 73.6 bits;  conditional E-value: 1.8e-24
        Med1  16 vsreglerLarqlgLetfwdennklsektqtLsIAgssfyLeIdfeednkVkdVsLslagseaeqsgeereeAseiLlrdLrltkkldeFaanLerLar 114
                 +s+ g e La++  L++f+d++n   +++  Ls+Ag+++++++   + ++  d++++la  +a+ ++ +++ A+eiL + ++ +++    + n   La 
  EPX74486.1  43 ISVTGFEYLAKKYRLDVFSDTSN---PNEVLLSLAGKIILIDVIIPTHGTYRDIKIALAFADATGEQYKNTTAEEILQSAIH-ENNTTLLERNVALLAM 137
                 7999****************999...9******************999**********************************.9999999********* PP

        Med1 115 lDklsgdpklncfealegleesLqklsqleskshwelekkdeeleelglcssvGkptmhkkgrvGLsldYWveprrlldekek 197
                 lD+ s   +  cf++le l   ++ +++   k++      d+e e +  +s  Gkp  +++g++GL+l +W+ +  l ++k +
  EPX74486.1 138 LDRCSPSVQQSCFQYLETLKSTFNIIYNSRLKNQ------DSENEMELIMSTEGKPLNDNDGNLGLQLAFWKYQNCLYNAKIS 214
                 *****99*******************76666662......3555777778**********************99998888654 PP

  == domain 2  score: 23.5 bits;  conditional E-value: 2.9e-09
        Med1 374 dlpglgitvkelpFshPrqlpeiLpiLRqyallstLlrsc 413
                 d+p +   v+ +p shPrq+  i+++ Rqy+ l+t+l+++
  EPX74486.1 325 DIPAR--SVHRIPYSHPRQILGIFQYVRQYLTLQTILENV 362
                 78889..9*****************************986 PP

>> Dynactin_p22  Dynactin subunit p22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.4     0.002        18      91     140 ..     128     177 ..      99     182 .. 0.90
   2 ?    6.8   0.1   0.00063       5.6      56     128 ..     350     422 ..     342     444 .. 0.76

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.002
  Dynactin_p22  91 LkktaalleqlqeLkpvldseeikdvpelkekLekLsqihlkqqeeveel 140
                   L+ ++all  l++ +p + ++ ++ +++lk++++ +  + lk q++ +e+
    EPX74486.1 128 LERNVALLAMLDRCSPSVQQSCFQYLETLKSTFNIIYNSRLKNQDSENEM 177
                   78899***************************************998887 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.00063
  Dynactin_p22  56 kkleelekyLd...peyedseelpdevKleliLaeedeLkktaalleqlqeLkpvldseeikdvpelkekLekLsq 128
                   +++ +l+++L+   p  + +++ +++++l+li+++ + ++ + ++l++l++  pv+   +i  +p+   +L++++ 
    EPX74486.1 350 RQYLTLQTILEnvkP-WSTKITATASLRLNLIMKQYPIIHIQYQELNKLSNVDPVIA--HIAVLPNGIVQLNSIAC 422
                   566677777774433.6677789999*****************************84..56666766666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (464 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       466  (0.0259914); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3217.66
//
Query:       EPX74487.1  [L=1069]
Description: CMGC/DYRK/DYRK2 protein kinase Pom1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.4e-49  168.1   0.0    4.2e-49  167.3   0.0    1.4  1  Pkinase          Protein kinase domain
    1.7e-14   53.7   0.1    5.5e-14   52.1   0.0    1.8  3  Pkinase_Tyr      Protein tyrosine kinase
  ------ inclusion threshold ------
      0.059   12.3   0.2      0.096   11.6   0.2    1.2  1  Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  167.3   0.0     7e-53   4.2e-49       1     264 []     688     984 ..     688     984 .. 0.86

  Alignments for each domain:
  == domain 1  score: 167.3 bits;  conditional E-value: 7e-53
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS......CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHS CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklk......hpnivrlyevfeekdelylvleyveggeladllerkg 93 
                 ye++  lG+GsfG+V+++++ etgk vA+K+i+++k+ + +    l E +il+k++          +++ + f+  d+l++ +e++  + l +l++ +g
  EPX74487.1 688 YEVVDFLGKGSFGQVLRCIDYETGKLVALKIIRNKKRFHIQA---LVETNILQKIRewdpmdEACMLQYSDHFYFRDHLCVATELLGVN-LYELIKSNG 782
                 778899****************************99998665...666666666654433337889999999**9*********99855.999999666 PP

                 S..--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEET..TTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHH CS
     Pkinase  94 s..lseeeakkiakqilegleylHskgiiHrDlKpeNiLide..kgelKitDFGlakelessskltsfvgtseYlAPEvlkeneyskkvDvWslGvily 188
                    l+   +k+i+kq+l  l+ l +k++iH+DlKpeNiL+ +  k ++K++DFG ++   +s  + +++ ++ Y++PEv+ + +y++++D+WslG+il+
  EPX74487.1 783 FkgLPIVVIKSITKQLLLCLSLLKQKNVIHCDLKPENILLCHpfKSQIKVIDFGSSCFEGES--VYTYIQSRFYRSPEVILGMGYGTPIDMWSLGCILA 879
                 5579999********************************98534777********9987664..79********************************* PP

                 HHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS......................................-HHHHHHHHHHT-SSG CS
     Pkinase 189 elltgkppfsgekgkekvekeldqlekilkilgetkeklpeasei......................................seeakdllkkllkkdp 249
                 e++tg p+f+ge+++e       ql  i++i+g+ + ++ e+  +                                      + ++++++ ++lk+dp
  EPX74487.1 880 EMYTGFPIFPGENEQE-------QLACIMEIFGPPDSSMLEK--CsrrkvffdsfgkprpfvsskgvsrrpfakslhqvleckDISFLSFIADCLKWDP 969
                 **********776666.......4445677777422222222..12245679999***************************999************** PP

                 CCSTTHHHHHTSGGG CS
     Pkinase 250 kkRltaeellqhpyl 264
                 ++R+t  e++qh+++
  EPX74487.1 970 EERMTPFEAIQHDFI 984
                 ************996 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.2   0.0       1.4   8.3e+03      41      58 ..     592     609 ..     584     612 .. 0.72
   2 !   52.1   0.0   9.2e-18   5.5e-14       5     212 ..     692     894 ..     688     907 .. 0.79
   3 ?   -2.7   0.0      0.48   2.9e+03     235     257 ..     958     981 ..     946     983 .. 0.78

  Alignments for each domain:
  == domain 1  score: -4.2 bits;  conditional E-value: 1.4
                  SHHHHHHHHHHHHHHHTS CS
  Pkinase_Tyr  41 teeekeelleeakimkkl 58 
                  ++++ ++ll+eakim++l
   EPX74487.1 592 NSKRINRLLDEAKIMQSL 609
                  4555788999****9986 PP

  == domain 2  score: 52.1 bits;  conditional E-value: 9.2e-18
                  EEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS.-.....BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTC CS
  Pkinase_Tyr   5 kklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkkl.k.....hpnivkllgvctkeepllivteyvkgGdLlkfLrkke 96 
                  + lG+G+fG+V ++  +    ++   Va+K+++++++ +   + l e++i++k+ +        ++++    + +++l++ te++   +L + ++++ 
   EPX74487.1 692 DFLGKGSFGQVLRCIDY----ETGKLVALKIIRNKKRFH--IQALVETNILQKIrEwdpmdEACMLQYSDHFYFRDHLCVATELLG-VNLYELIKSNG 782
                  569***********999....88999******7766555..555667777777732111113445556666667777999999985.59********9 PP

                  TTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE..TTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHH CS
  Pkinase_Tyr  97 kekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse..nkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfG 192
                   + l +  + s++ q+   ++ L++k+++H dl   N+Ll++  ++++k+ DfG +     ++ y+  +    +  + +pE++  + + +  D+Ws G
   EPX74487.1 783 FKGLPIVVIKSITKQLLLCLSLLKQKNVIHCDLKPENILLCHpfKSQIKVIDFGSSCFE-GESVYTYIQ----SRFYRSPEVILGMGYGTPIDMWSLG 875
                  9****************************************98889********87765.444443333....34588******************** PP

                  HHHHHHHTTSSGTTTTSHHH CS
  Pkinase_Tyr 193 vllwEiftlgespypglkne 212
                   +l E++t g   +pg +++
   EPX74487.1 876 CILAEMYT-GFPIFPGENEQ 894
                  ******99.66666665544 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 0.48
                  HHHHHHHT-SSGGGS--.HHHHHH CS
  Pkinase_Tyr 235 yelmkkcweedpeeRpt.fselve 257
                   +++ +c++ dpeeR t f+++++
   EPX74487.1 958 LSFIADCLKWDPEERMTpFEAIQH 981
                  578999*********864777765 PP

>> Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.2   1.6e-05     0.096     287     320 ..     798     831 ..     774     844 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 1.6e-05
  Pox_ser-thr_kin 287 LyikiyelpdcenflhvDlkPdniLifds.kekli 320
                      L++++  l + +n +h DlkP+niL+    k++++
       EPX74487.1 798 LLLCL-SLLKQKNVIHCDLKPENILLCHPfKSQIK 831
                      55666.444689*************9654355544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1069 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       978  (0.0545485); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.91u 0.34s 00:00:01.25 Elapsed: 00:00:00.49
# Mc/sec: 6536.51
//
Query:       EPX74488.1  [L=332]
Description: NLI interacting factor family phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-50  171.5   0.1    1.3e-50  171.2   0.1    1.1  1  NIF       NLI interacting factor-like phosphatase


Domain annotation for each model (and alignments):
>> NIF  NLI interacting factor-like phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  171.2   0.1   7.5e-55   1.3e-50       1     156 []     165     325 ..     165     325 .. 0.93

  Alignments for each domain:
  == domain 1  score: 171.2 bits;  conditional E-value: 7.5e-55
         NIF   1 ktLVLDLDetLvhskleksk......klkvegekvevsvlkRpgldefLkelsklyevvifTasseeyaeavidildpekkllshrlyrescvkkkgey 93 
                 k+L+LDLDetLvhs+++  +       ++++g  ++v+v kRpg+d fL+++ +l+e+v+fTas  +ya++v+++ld+ +  + hrl+re+c+ ++g++
  EPX74488.1 165 KCLILDLDETLVHSSFKYLEpadyvvSIEIDGLFHDVRVVKRPGVDLFLQKMGELFEIVVFTASLAKYADPVLNMLDNSQV-VRHRLFREACCNYEGNF 262
                 79*************944434677665566677799*******************************************96.**********877**** PP

         NIF  94 vKdLsllgrdlsrvvivDdspdsfelqpengipiksffsdkkDneLlkllpllkelakvddvr 156
                 vKdLs lgr+l++ +i+D+sp s+ ++p+n++pi+s+f+d +D eLl+l+p+l++l++v dv+
  EPX74488.1 263 VKDLSQLGRNLEDAIILDNSPSSYIFHPSNAVPISSWFNDMHDMELLDLIPFLEQLSRVPDVS 325
                 ***********************************************************9995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (332 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       499  (0.027832); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2412.58
//
Query:       EPX74489.1  [L=368]
Description: saccharopine dehydrogenase Lys3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.2e-29  101.6   0.0    5.7e-29  101.1   0.0    1.2  1  AlaDh_PNT_N  Alanine dehydrogenase/PNT, N-terminal domain
  ------ inclusion threshold ------
      0.072   12.4   0.0       0.13   11.5   0.0    1.5  2  AlaDh_PNT_C  Alanine dehydrogenase/PNT, C-terminal domain


Domain annotation for each model (and alignments):
>> AlaDh_PNT_N  Alanine dehydrogenase/PNT, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.1   0.0   6.4e-33   5.7e-29       1     136 []       7     142 ..       7     142 .. 0.96

  Alignments for each domain:
  == domain 1  score: 101.1 bits;  conditional E-value: 6.4e-33
                  EE---SSTT----SS-HHHHHHHHHTT-EEEEETTTTGGGTC-HHHHHHTTEEEES.CHHHHCTTSSEEEESS--.CHCGGGS-TTCEEEEE--GG.. CS
  AlaDh_PNT_N   1 gvpkEikagErRvaltPatvkkLvkaGhevlVesgaGegagfsdeeYeeaGaeive.saeevlaeadlilkVkepseeelellkegqtlisflhla.. 95 
                  ++++E+k+ E+R altP+t+kkL +aG++v++e++   +++f+d+e+e+aG e+v+  +++ ++++++i ++ke+  +e +  + ++t+i+f+h++  
   EPX74489.1   7 WLRAESKPLEERSALTPTTAKKLANAGFRVTIERSS--QRAFKDSEFESAGFEMVPeGSWRNAPRDAYIYGLKEL--PENDNSPLHHTHIQFAHCYkn 100
                  6799********************************..*****************9889****************..888889*************99 PP

                  ..CHHHHHHHHHHCTEEEEEGGG-BSSGCCGGGTHHHHHHHHH CS
  AlaDh_PNT_N  96 ..anpellealaekgvtaialElvprisraqsldaLssmaeia 136
                    +++e+l+++ ++++ +++lE++++ +++++++a++++a++a
   EPX74489.1 101 qeGWREVLSRFPQGNGLLYDLEFLQD-DSGRRVAAFGYHAGFA 142
                  8669**********************.8************997 PP

>> AlaDh_PNT_C  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0      0.69   6.2e+03      30      51 ..     195     217 ..     189     223 .. 0.79
   2 ?   11.5   0.0   1.5e-05      0.13     123     191 ..     274     351 ..     225     366 .. 0.66

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 0.69
                  EEEEEST.SHHHHHHHHHHHHTT CS
  AlaDh_PNT_C  30 kvlviGg.GvaGlqAiatakglg 51 
                  ++lviG+ G  G  A   a+++g
   EPX74489.1 195 RILVIGArGRCGSGACDLATKVG 217
                  78899987888888888887766 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 1.5e-05
                  EEEETTGGGT........-SBTT-..-TBBTTSEEEEETTEEEEEBSTGGGGSHHHHHHHHHHHHHHHHHHHCHHHTCC CS
  AlaDh_PNT_C 123 VivDvAidqG........Gnvets..rltthgepvveekgvvhygvanlpgavprtasalltnntlpyleelladkglk 191
                  V+ Dv++d+          nv+ts  ++t + + +       ++    lp+ +pr++s+++++++lp l +l +d + +
   EPX74489.1 274 VVCDVSCDTTnpnnpipiYNVNTSfdHPTVPVDGIKGPLPLEVISIDHLPTLLPRESSEAFSEALLPSLFAL-KDVNHA 351
                  6666666643222222223444444455555555555555579************************99999.766654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (368 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       335  (0.0186848); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2747.08
//
Query:       EPX74490.1  [L=112]
Description: hypothetical protein SOCG_01974 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.3e-23   81.2   2.9    7.1e-23   80.8   2.9    1.2  1  DUF3128   Protein of unknown function (DUF3128)


Domain annotation for each model (and alignments):
>> DUF3128  Protein of unknown function (DUF3128)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.8   2.9   3.9e-27   7.1e-23       2      79 .]      27     107 ..      26     107 .. 0.97

  Alignments for each domain:
  == domain 1  score: 80.8 bits;  conditional E-value: 3.9e-27
     DUF3128   2 lscseafdellsCyslggqfkqyYryGeldnCsekwedfkfClklktkksekiqeilkkrerekkakk...kssedvWelR 79 
                 +s + +fd++ +C ++ +q+++yYryG++++C+  ++dfk+Cl++k+k++e+ q++l++r+ +++ k    +ssed+W++R
  EPX74490.1  27 CSLQYYFDQMAMCLTVTSQIRHYYRYGDYNKCKGAFTDFKWCLSTKSKSPEEEQKMLQERRLDQWVKLregPSSEDIWNVR 107
                 78999***********************************************************9998899********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       552  (0.0307881); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.24s 00:00:00.59 Elapsed: 00:00:00.37
# Mc/sec: 903.96
//
Query:       EPX74491.1  [L=402]
Description: ubiquitin-protein ligase E3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      3e-27   95.3   0.1      3e-27   95.3   0.1    1.9  3  CLTH          CTLH/CRA C-terminal to LisH motif domain
      5e-09   36.0   0.2    9.2e-08   32.0   0.1    2.6  2  zf-RING_UBOX  RING-type zinc-finger
    0.00012   21.5   0.1    0.00024   20.6   0.1    1.4  1  Rtf2          Rtf2 RING-finger
    0.00064   19.6   2.6    0.00082   19.3   0.6    2.2  2  zf-RING_5     zinc-RING finger domain
     0.0063   16.8   0.6     0.0063   16.8   0.6    2.0  2  zf-RING_2     Ring finger domain
  ------ inclusion threshold ------
      0.038   14.2   2.9      0.047   13.8   0.9    2.4  2  zf-C3HC4_4    zinc finger of C3HC4-type, RING
      0.051   13.4   0.5       0.14   12.0   0.5    1.8  1  Prok-RING_4   Prokaryotic RING finger family 4
      0.062   12.6   3.6      0.052   12.8   1.6    1.8  2  ATLF          Anthrax toxin lethal factor, N- and C-terminal 
      0.071   13.0   3.0       0.09   12.7   0.9    2.3  2  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
      0.095   12.6   2.9       0.29   11.0   1.4    2.4  2  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)


Domain annotation for each model (and alignments):
>> CLTH  CTLH/CRA C-terminal to LisH motif domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1       2.5   4.5e+03      87     109 ..      30      51 ..      16      90 .. 0.55
   2 ?   -1.9   0.3       1.6   2.9e+03      72      91 ..      96     114 ..      41     127 .. 0.62
   3 !   95.3   0.1   1.7e-30     3e-27       2     146 ..     139     306 ..     138     308 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 2.5
        CLTH  87 Lafsdpeskelssplknlldpsr 109
                 La ++ +  +++++++++l++s 
  EPX74491.1  30 LATKEACI-TDPANVSKQLSSSC 51 
                 44444444.44444444444433 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.6
        CLTH  72 endehlkelekamsLLafsd 91 
                 +    +kel+ a +L +f++
  EPX74491.1  96 FE-DKKKELNTALALHFFRQ 114
                 22.35666666666665555 PP

  == domain 3  score: 95.3 bits;  conditional E-value: 1.7e-30
        CLTH   2 ikerqkIiklilegdlseaiewinenkpellesnsnLeFkLkllqfielirgktkdieealeyarenlefendehlkelekamsLLafsdpes...... 94 
                 ++ ++ I + i+++dl++ai+w+ +++ +l+++ snLeF L++ q++  +  +tkd+++a++y+r++l  ++++hlke++k++++L+fs+         
  EPX74491.1 139 FTLLNTILQGIRQHDLQSAIDWALQCRGYLERKGSNLEFILRRHQLLNEYF-QTKDVLAAIHYCRTYLTEFQEKHLKEIQKLIGALFFSSRRAnlvssk 236
                 67789******************************************9999.77**************666666****************988999999 PP

        CLTH  95 ...................kelssplknlldpsrrekvakefnsailkllglskespLeillsaglsalkt 146
                                    ++ ++ +++ l    ++++  +f +++++ lg+s +sp  i+++ag++al+ 
  EPX74491.1 237 tngfhdglpreqygieqiaNDVPEDYRKALRL-DWKHLELIFVREFCAALGMSLDSPVDIVVNAGSIALPV 306
                 99999988888888887777777777777766.4**********************************986 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.25   4.4e+02      18      23 ..     121     126 ..     120     135 .. 0.91
   2 !   32.0   0.1   5.1e-11   9.2e-08       1      39 []     345     386 ..     345     386 .. 0.92

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.25
  zf-RING_UBOX  18 HtFCre 23 
                   H+FC+e
    EPX74491.1 121 HSFCKE 126
                   ****98 PP

  == domain 2  score: 32.0 bits;  conditional E-value: 5.1e-11
  zf-RING_UBOX   1 CpIClelft..dP.lvlpCGHtFCreClwelskslegafkCP 39 
                   Cp+++e+ t  +P +++ CGH++ +e l++ls++++++fkCP
    EPX74491.1 345 CPVSKEQATeeNPpMMMACGHVIAQESLRQLSRNGSQHFKCP 386
                   ******999997776668**********99***********9 PP

>> Rtf2  Rtf2 RING-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.1   1.3e-07   0.00024     110     161 ..     338     393 ..     308     400 .. 0.74

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 1.3e-07
        Rtf2 110 tkeapfiCpltglemngktkfvalrkCGcVfsekalkevk.....sevClvCgkeyk 161
                 + ++ f Cp+++ +   ++   +++ CG+V++++ l+++      + +C+ C +e +
  EPX74491.1 338 HFHSVFTCPVSKEQATEENPP-MMMACGHVIAQESLRQLSrngsqHFKCPYCPNEND 393
                 55789******9998777765.6779*************855533334999987655 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       2.1   3.8e+03      22      27 ..     121     126 ..     120     130 .. 0.85
   2 !   19.3   0.6   4.6e-07   0.00082       2      42 ..     345     388 ..     344     390 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 2.1
   zf-RING_5  22 HifCek 27 
                 H+fC++
  EPX74491.1 121 HSFCKE 126
                 9***86 PP

  == domain 2  score: 19.3 bits;  conditional E-value: 4.6e-07
   zf-RING_5   2 CnkCfeklskeekfyltsCgHifCekClkkll...ekeavCpiC 42 
                 C++  e+ ++e ++++++CgH++ ++ l++l+    + ++Cp C
  EPX74491.1 345 CPVSKEQATEENPPMMMACGHVIAQESLRQLSrngSQHFKCPYC 388
                 7777888899999******************************* PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.1       8.1   1.5e+04       6      15 ..      18      27 ..      16      36 .. 0.58
   2 !   16.8   0.6   3.5e-06    0.0063       2      43 ..     344     388 ..     343     389 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 8.1
   zf-RING_2  6 Cleelssads 15
                Cl+++++ ++
  EPX74491.1 18 CLQKMDELET 27
                6666655444 PP

  == domain 2  score: 16.8 bits;  conditional E-value: 3.5e-06
   zf-RING_2   2 eCpICleelssadsvlllpCgHvfhreClerwlrssst...CPlC 43 
                 +Cp+  e+ ++++ ++ + CgHv+ +e l+++ r+ s+   CP+C
  EPX74491.1 344 TCPVSKEQATEENPPMMMACGHVIAQESLRQLSRNGSQhfkCPYC 388
                 5888877777777777789************77777779****** PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       6.1   1.1e+04       4      10 ..     201     207 ..     199     212 .. 0.62
   2 ?   13.8   0.9   2.6e-05     0.047      11      42 .]     358     388 ..     343     388 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 6.1
  zf-C3HC4_4   4 CldYLek 10 
                 C+ YL++
  EPX74491.1 201 CRTYLTE 207
                 6666653 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 2.6e-05
  zf-C3HC4_4  11 PvsleCGhsfClsCisslqkepdgeqllCplC 42 
                 P+ ++CGh++ ++ + +l+ + ++  + Cp C
  EPX74491.1 358 PMMMACGHVIAQESLRQLSRNGSQH-FKCPYC 388
                 9*******************99876.*****9 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.5   7.9e-05      0.14       6      40 ..     353     392 ..     341     397 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 7.9e-05
  Prok-RING_4   6 eqekkailepCgHlvCkeCfdskdls.....sCPlCqrri 40 
                  ++e+ +++  CgH++ +e + +   +      CP C ++ 
   EPX74491.1 353 TEENPPMMMACGHVIAQESLRQLSRNgsqhfKCPYCPNEN 392
                  457888999***********99866556778*****9874 PP

>> ATLF  Anthrax toxin lethal factor, N- and C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   1.6   2.9e-05     0.052     116     184 ..      43     125 ..      27     130 .. 0.75
   2 ?   -1.8   0.0      0.86   1.5e+03     165     181 ..     195     211 ..     179     220 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2.9e-05
                 HHHHCTTCCG......SCCTTSSSHHHHHHHHHHTCC....TSCSCCCH....CCHHHHCCSSSSSCTCCCCTHHHHHHHHHH CS
        ATLF 116 igkglsrdil......skdkelrnefldlikelkdav....DsdssDLl....FidkfkeegsdlsveflkeneaefqevFak 184
                 ++k ls +           k+++++f   ++++++      + + +D+     F dk ke ++ l ++f ++ e+e+ + F k
  EPX74491.1  43 VSKQLSSSCTkteqvfDDMKKIEKKFNSSMNKFGKVLdrkfNFNLEDISlqssFEDKKKELNTALALHFFRQGETEIAHSFCK 125
                 66666544433333336677788888888888888773333234455448899***************************986 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.86
                 SSSCTCCCCTHHHHHHH CS
        ATLF 165 dlsveflkeneaefqev 181
                    +++ ++ ++efqe 
  EPX74491.1 195 LAAIHYCRTYLTEFQEK 211
                 45688999999999985 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       1.3   2.4e+03      19      23 ..     121     125 ..     116     126 .. 0.85
   2 ?   12.7   0.9     5e-05      0.09       1      41 []     345     388 ..     345     388 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.3
                 --B-C CS
    zf-C3HC4  19 HsfCs 23 
                 HsfC+
  EPX74491.1 121 HSFCK 125
                 ****7 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 5e-05
                 -TTT-S--SS-E...E-TTS--B-CHHHHHHHHC.TSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepn..elleCkHsfCskCirkilks.rkkvkCPlC 41 
                 Cp+ +e a+e+n  +++ C+H + ++ +r++ ++ ++++kCP C
  EPX74491.1 345 CPVSKEQATEENppMMMACGHVIAQESLRQLSRNgSQHFKCPYC 388
                 777777777777889******************99********9 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.53   9.5e+02      19      25 ..     120     126 ..     116     130 .. 0.84
   2 ?   11.0   1.4   0.00016      0.29      10      40 .]     355     388 ..     344     388 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.53
  zf-C3HC4_2  19 gHvfCqk 25 
                  H+fC++
  EPX74491.1 120 AHSFCKE 126
                 5****96 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00016
  zf-C3HC4_2  10 kdpsvvtpCgHvfCqkCilrsLeekn...eCPlC 40 
                 ++p ++ +CgHv  q+ +++  ++++   +CP C
  EPX74491.1 355 ENPPMMMACGHVIAQESLRQLSRNGSqhfKCPYC 388
                 6889*************9993333222468***9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (402 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1124  (0.0626917); expected 358.6 (0.02)
Passed bias filter:                      690  (0.0384851); expected 358.6 (0.02)
Passed Vit filter:                        74  (0.00412739); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 2833.02
//
Query:       EPX74492.1  [L=905]
Description: copper transporting ATPase Ccc2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.5e-48  163.2   0.8    1.2e-47  161.8   0.5    2.0  2  E1-E2_ATPase  E1-E2 ATPase
    1.1e-36  127.1   0.0    1.9e-36  126.3   0.0    1.4  1  Hydrolase     haloacid dehalogenase-like hydrolase
    3.3e-11   43.5   0.3    6.4e-09   36.1   0.1    3.0  2  HMA           Heavy-metal-associated domain
  ------ inclusion threshold ------
      0.019   14.2   0.4      0.046   12.9   0.1    1.7  2  CofC          Guanylyl transferase CofC like
       0.11   12.6   0.0        1.4    9.1   0.0    2.9  3  Hydrolase_6   Haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> E1-E2_ATPase  E1-E2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  161.8   0.5   3.4e-51   1.2e-47       2     178 ..     316     506 ..     315     509 .. 0.94
   2 ?   -3.7   0.0       2.1   7.4e+03      53      64 ..     692     703 ..     689     731 .. 0.78

  Alignments for each domain:
  == domain 1  score: 161.8 bits;  conditional E-value: 3.4e-51
                   SS--EEEEE-TTS-EEEEGGG--TTSEEEEETT-B--SEEEEEEE-SEEE-TTTS---S-EE-G-TTEE-TT-EEEE-EEEEEEEE-TTTSTTTTTS CS
  E1-E2_ATPase   2 llpptakvirdgteeeidakelvpGDivllkagdrvpaDgrivegsaevdesaLTGEslpvekekgdmvfsGtvvvsgeakavVtatgedtelgkia 98 
                   l+p+ +++i+++++ +i+++ ++ GD vl+++gdr+++Dg+i+egs+ +des+L GE +pv k+  d+v sGtv+ +g++ +++++  ++++l+ i+
    EPX74492.1 316 LSPSNTTIIQNDEQISIETDLVQRGDTVLVRPGDRISVDGVIIEGSSYIDESSLSGEPVPVFKKVDDYVLSGTVNGNGRILFRALKSPRESQLAVIV 412
                   7899********************************************************************************************* PP

                   TTS--------HHHHHHHHHHHHHHHHHHHHHHHHHHS-STTTSSTT.............HHHHH.HHHHHHHHS-TTHHHHHHHHHHHHHHHH CS
  E1-E2_ATPase  99 rlveeakskktplqkkldklgkvlvpvvlliallvflialllgksla.............eallr.alallvaaiPcaLplavplalalgarrl 178
                   +lv++a+ +k+p+q+++dk+++++vpv++++a+ +f++++l   +                  l+ +++++v+a+PcaL+l +p+a+++g++  
    EPX74492.1 413 DLVQKAQTSKAPIQEFADKVAGIFVPVIITLAVSTFAFWYLFVTFSSsyppifndsigkfAVCLKlTISVIVVACPCALGLSTPTAVMVGTGVG 506
                   ***************************************995555556777888888998555556************************9865 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 2.1
                   TTTS---S-EE- CS
  E1-E2_ATPase  53 saLTGEslpvek 64 
                   s+LTG++lp  +
    EPX74492.1 692 SLLTGDQLPTAR 703
                   889999998765 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.3   0.0   5.3e-40   1.9e-36       1     210 []     525     756 ..     525     756 .. 0.85

  Alignments for each domain:
  == domain 1  score: 126.3 bits;  conditional E-value: 5.3e-40
                 SSEEEEESBTTTBCHH......HHHHHHHHHHCHHHHHHHHHH......HHCHHHHHHHHHHHHH....HHHHHHHHHETTTE............HHHH CS
                 xxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxx....xxxxxxxxxxxxxx............xxxx RF
   Hydrolase   1 iktvvfDkdGTLttge......psvedvivsaalalaaaletg......sehpigkalvaaakar....sgaltgfatfigrg............ayai 71 
                 ++tv+fDk+GTLt+ge       +ve+ ++++ +++ +   ++      sehpigka++++ +++    s +l++f +++g+g            +++ 
  EPX74492.1 525 VDTVIFDKTGTLTRGEltvnqmEVVEENTKKLNISIDELWGLVytaelaSEHPIGKAITEKLQELshtySMELKSFLAIPGQGakaevlyknrifTLLL 623
                 68**************887664444444444444444444444777777****************99999999************************** PP

                 THHHHHHHH..HCHHHHHHHHHHHHHHCHHHHHH..TTHHHHHHHHHHTHHBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTGGGESEEEEH CS
                 xxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  72 gkpewltal..dippdlgaaigsaqsqgrtvall..qaralavftiadplkvkpeaaeavasLkaagievvlltgdnpetaeraanqlGddyfdavias 166
                 g+  +l+++    p + + +   a   g t +    +++ l+ f   d+  ++p+aa +v +Lk ++ +v lltgd+  ta+r+a  +G          
  EPX74492.1 624 GNSLLLRENqiYTPLEIDHTLNFASNNGLTCVQIsvNNEFLGFFGCMDE--LRPDAARCVSALKMMKKNVSLLTGDQLPTARRVAYDVG---------- 710
                 *********88555555566666666666665556677***********..**************************************.......... PP

                 HCES...STTTSHHHHHHHHHHHTSTGGGEEEEESSHHHHHHHHHTT CS
                 xxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 167 diet...vakpspegkvaaireLqgkpeevamVGDgvnDaaalaaAg 210
                  i +   +a++ p  k a++++ + ++++vamVGDg+nD++ la A+
  EPX74492.1 711 -ILAsdvHAEAVPTTKTAIVQQKKDEGHRVAMVGDGINDSPSLALAD 756
                 .5555569************************************997 PP

>> HMA  Heavy-metal-associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.1   0.1   1.8e-12   6.4e-09       2      62 .]       6      66 ..       5      66 .. 0.97
   2 ?    4.2   0.0     0.017        61      15      58 ..      96     140 ..      95     143 .. 0.83

  Alignments for each domain:
  == domain 1  score: 36.1 bits;  conditional E-value: 1.8e-12
         HMA  2 vrvsgmhCagCaakvekvLselpgVesvkvdlatktvtVegdaestklrkiieaiekagyk 62
                ++v+gm+C++C+a+++  L++++g ++ +v+l   +++ ++d++ +++++iie ie++g++
  EPX74492.1  6 INVQGMTCTSCVASIQAMLKSVEGMQQFTVSLLLERAVAVHDMSTLSPEDIIERIEDCGFD 66
                789********************************************************96 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.017
         HMA  15 kvekvLselpgVesvkvdlat.ktvtVegdaestklrkiieaiek 58 
                 kv++ +  l+gV +v  +        V++d e t +r+i+e+ie+
  EPX74492.1  96 KVQSQINDLQGVLNVRQQTQPdAVIHVSYDSEITGPRTILEEIES 140
                 788899999999888888776455689999999**********96 PP

>> CofC  Guanylyl transferase CofC like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   1.3e-05     0.046      36      82 ..     517     563 ..     511     596 .. 0.91
   2 ?   -3.3   0.0       1.2   4.2e+03     116     130 ..     755     769 ..     753     791 .. 0.63

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.3e-05
        CofC  36 dvidalkrldvlvvsedeevleyaldelgvevvkekekdlntaveka 82 
                 d+ +al+++d +++ +   +   +l + ++evv+e+ k ln ++++ 
  EPX74492.1 517 DILEALNKVDTVIFDKTGTLTRGELTVNQMEVVEENTKKLNISIDEL 563
                 99***************************************999876 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.2
        CofC 116 advviaPargGGtnl 130
                 adv iaP+ g G  l
  EPX74492.1 755 ADVGIAPSSGSGIAL 769
                 688888888888532 PP

>> Hydrolase_6  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       3.4   1.2e+04      60      81 ..     284     305 ..     278     311 .. 0.79
   2 ?   -3.0   0.0       2.2     8e+03       5      18 ..     353     366 ..     352     368 .. 0.86
   3 ?    9.1   0.0   0.00039       1.4      14      88 ..     672     744 ..     665     756 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 3.4
                  GGGEEEHHHHHHHHHHHHSXXX CS
  Hydrolase_6  60 eeqvvtsataaaeylkkrkadk 81 
                   ++++ s +++ +yl+++ +++
   EPX74492.1 284 TSDMLLSFVTLGRYLESKAKGS 305
                  6789999999999*99976654 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 2.2
                  STTTSEETTEE-TT CS
  Hydrolase_6   5 idGvLwrgdkaipg 18 
                  +dGv+++g++ i++
   EPX74492.1 353 VDGVIIEGSSYIDE 366
                  7*******998876 PP

  == domain 3  score: 9.1 bits;  conditional E-value: 0.00039
                  EE-TTHHHHHHHHHHTT-EEEEEE---SS-HHHHHHHHHHTT----GGGEEEHHHHHHHHHHHHSXXXEEEEESX CS
  Hydrolase_6  14 kaipgaaealnalraagkpvvllTNnsskseeeyakkleklgvditeeqvvtsataaaeylkkrkadkkvlvige 88 
                  ++ p aa+++ al+ ++k+v llT     + + +a ++  l  d+++e v t+ ta+++  k+  ++++v ++g 
   EPX74492.1 672 ELRPDAARCVSALKMMKKNVSLLTGDQLPTARRVAYDVGILASDVHAEAVPTTKTAIVQQKKD--EGHRVAMVGD 744
                  67799**************************************************99986655..7888888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (905 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       747  (0.0416643); expected 358.6 (0.02)
Passed bias filter:                      520  (0.0290033); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.69u 0.26s 00:00:00.95 Elapsed: 00:00:00.41
# Mc/sec: 6621.06
//
Query:       EPX74493.1  [L=416]
Description: phosphoribosyl-AMP cyclohydrolase/phosphoribosyl- ATP pyrophosphohydrolase His7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.1e-24   83.3   0.2    1.4e-23   82.5   0.2    1.4  1  PRA-CH    Phosphoribosyl-AMP cyclohydrolase
    6.4e-16   58.6   0.0    1.6e-15   57.3   0.0    1.7  1  PRA-PH    Phosphoribosyl-ATP pyrophosphohydrolase
  ------ inclusion threshold ------
      0.011   15.8   0.0      0.027   14.7   0.0    1.6  1  MazG      MazG nucleotide pyrophosphohydrolase domain
      0.037   13.6   0.0      0.088   12.4   0.0    1.6  1  LEDGF     Lens epithelium-derived growth factor (LEDGF)


Domain annotation for each model (and alignments):
>> PRA-CH  Phosphoribosyl-AMP cyclohydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.5   0.2   3.1e-27   1.4e-23       2      73 ..     226     297 ..     225     298 .. 0.96

  Alignments for each domain:
  == domain 1  score: 82.5 bits;  conditional E-value: 3.1e-27
                 EEEE-HHHHHHHHHHSB-EEEETTTTEEEETTTTTS--EEEEEEEE-TTSSEEEEEEEESS.-SSTTSBSSS- CS
      PRA-CH   2 laymnkealektletgkavyySrsrkklWkKGetSgnvqkvkeirlDcDqDalllkveqkg.aaCHtgkesCF 73 
                 l+y++ke+++++++tg+ vy+Sr+r  lW+KG+tSg+vqk+ +i+lDcD+D+l + v+q+g  +CH+++  CF
  EPX74493.1 226 LVYSSKESVAESMKTGTGVYQSRKR-GLWYKGATSGAVQKLLRIDLDCDGDCLRFVVHQTGkGFCHLDTLHCF 297
                 68***********************.9*********************************846********** PP

>> PRA-PH  Phosphoribosyl-ATP pyrophosphohydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.3   0.0   3.5e-19   1.6e-15       2      80 ..     304     383 ..     303     386 .. 0.95

  Alignments for each domain:
  == domain 1  score: 57.3 bits;  conditional E-value: 3.5e-19
                 HHHHHHCT----SS----.-HHHHHH...HHHHHHHHHHHHHHHT-SCHHHHHHHHHHHHHHHHHHHHHHCT--CHHHHHHHH CS
      PRA-PH   2 kefhrligerkpetPeas.taelasl...raaligEEavElleaasegdlaeladelaDllYvtygllvllGidldavfeevh 80 
                  +++ ++ +rk+++Pe+s ta+l+s+   ++a+i+EEa+El++a    ++ e+++e+aDllY+t+  +v  G++l+++ ++++
  EPX74493.1 304 PQLESVLTDRKENAPEGSyTARLFSDpklLRAKIMEEAEELCDAK---TKDEVTWEMADLLYFTITRCVGSGVTLEDISRHLD 383
                 58999****************************************...8*****************************98876 PP

>> MazG  MazG nucleotide pyrophosphohydrolase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   5.9e-06     0.027       3      60 ..     330     380 ..     328     394 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 5.9e-06
                 HHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHH CS
        MazG   3 petllaylleEvgEvaeaIkkedrdeleeELGDvLlqvlflaniaeeeggidledvae 60 
                 p+ l a ++eE++E+++a   + +de++ E++D+L+  +  +      +g++led+ +
  EPX74493.1 330 PKLLRAKIMEEAEELCDA---KTKDEVTWEMADLLYFTITRCVG----SGVTLEDISR 380
                 688999***********9...45568*********999988885....7777777655 PP

>> LEDGF  Lens epithelium-derived growth factor (LEDGF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0     2e-05     0.088      11      85 ..      64     141 ..      58     144 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 2e-05
       LEDGF  11 ikeslkldradvekcl...eaLdelkslqvtplmLkKnpeivetikklrrYkgnleewklteeekvefkekakeirkk 85 
                 i e++k+ +a + + l   e+L+el++++ ++l+Lk n++ ++ + +l ++ g+ +    t++   +f eka++  +k
  EPX74493.1  64 IEECIKILNAGALAILvneEVLQELSDISPSRLILKTNTTDIKKVEELCKFAGSFQWIARTQDYPPDFFEKASKLIHK 141
                 666666666655554433379*********************************998899999999998888765554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (416 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       645  (0.0359752); expected 358.6 (0.02)
Passed bias filter:                      563  (0.0314016); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.45
# Mc/sec: 2785.83
//
Query:       EPX74494.1  [L=159]
Description: TIM22 inner membrane protein import complex anchor subunit Tim18 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.8e-53  177.7   0.0    9.1e-53  177.5   0.0    1.0  1  CybS      CybS, succinate dehydrogenase cytochrome B small su


Domain annotation for each model (and alignments):
>> CybS  CybS, succinate dehydrogenase cytochrome B small subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  177.5   0.0   5.1e-57   9.1e-53       4     133 .]      29     158 ..      26     158 .. 0.98

  Alignments for each domain:
  == domain 1  score: 177.5 bits;  conditional E-value: 5.1e-57
        CybS   4 lklipqppggvsgtvndaakvpepsksegsyhwtleRivavglvpltvvplvagslspvlDavlavlllihshlgfesciiDYipkrvygklhklahyl 102
                  +++p+pp+ ++gtvndaa+ p+psk++gsyhw++eRiva+g+vp +v+pl+ag+ +p+lDa+la+++++h+hlgfesc+iDY+pkr++ ++  l+h++
  EPX74494.1  29 RQIFPPPPQSIKGTVNDAAVFPPPSKFHGSYHWNFERIVAIGMVPQVVMPLFAGTSHPILDAALACTMITHAHLGFESCVIDYFPKRRFHRIGPLVHWI 127
                 57899********************************************************************************************** PP

        CybS 103 LalgtvlslvGlYeletednGltelvkklws 133
                 L+++tvl+++G+Ye++t+d+Glte +kklw+
  EPX74494.1 128 LRGFTVLTFIGVYEFNTNDIGLTEGIKKLWK 158
                 ******************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       283  (0.0157845); expected 358.6 (0.02)
Passed bias filter:                      254  (0.014167); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1213.05
//
Query:       EPX74495.1  [L=461]
Description: processing peptidase complex beta subunit Qcr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-50  171.1   3.3    4.1e-50  169.6   2.1    2.3  2  Peptidase_M16    Insulinase (Peptidase family M16)
    4.5e-40  137.6   0.0      8e-38  130.3   0.0    2.2  2  Peptidase_M16_C  Peptidase M16 inactive domain


Domain annotation for each model (and alignments):
>> Peptidase_M16  Insulinase (Peptidase family M16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  169.6   2.1   4.6e-54   4.1e-50       2     149 .]      37     184 ..      36     184 .. 0.99
   2 ?   -0.9   0.0      0.17   1.5e+03     101     148 ..     354     401 ..     350     402 .. 0.81

  Alignments for each domain:
  == domain 1  score: 169.6 bits;  conditional E-value: 4.6e-54
                    EEEEE-TSSSEEEEEEEES-SGGGSCTTTTTHHHHHHHHTTSBBSSSCHHHHHHHHHHTTCEEEEEEESSEEEEEEEEEGGGHHHHHHHHHHHHHS CS
  Peptidase_M16   2 valesdppaktsavglvvdaGSryepkdlnGlAHllehmafkgTkkypsnklaeeleklGgslnAttsrentvYyvevlskdlekaldvladvfka 97 
                    +a+e++p+a+t++v + vdaGSr+e +++nG+AH+leh+afkgTk++++++l+ e+e+ G++lnA+tsre+tvYy+++++++++k ++vlad++++
     EPX74495.1  37 IATEHHPYAQTATVLVGVDAGSRAESEKNNGAAHFLEHLAFKGTKNRSQRALELEFENTGAHLNAYTSREQTVYYAHAFKEAVPKTVAVLADILTN 132
                    79********************************************************************************************** PP

                    BTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHTTTSGGGSHSS-TH CS
  Peptidase_M16  98 plleesevererkvvekeveavdaepekvveenlhaaayrekalgrsllgpe 149
                    + +++ +verer+v+++e e+vd+  ++vv+++lha+ay+ +algr++lgp+
     EPX74495.1 133 SSISSAAVERERQVILREQEEVDKMADEVVFDHLHATAYQGQALGRTILGPK 184
                    *************************************************995 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.17
                    SHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHTTTSGGGSHSS-T CS
  Peptidase_M16 101 eesevererkvvekeveavdaepekvveenlhaaayrekalgrsllgp 148
                    + ++  r   ++++eve ++a+ +++++ +l +++   +  gr+ll +
     EPX74495.1 354 TLQNWARLTVATRAEVELAKAQLRASLLLSLDSTTAIAEDIGRQLLTT 401
                    555556655688999999999999999999***999999999999876 PP

>> Peptidase_M16_C  Peptidase M16 inactive domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.2   0.0    0.0021        19      52     163 ..      12     130 ..       4     146 .. 0.75
   2 !  130.3   0.0   8.9e-42     8e-38       1     183 []     189     376 ..     189     376 .. 0.93

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.0021
                      GSCTSSSSSGGGSSEEEEEEEES........SS.SSEEEEEEEEEECT.CTHTTHHHHHHHHHHHHSSTTSHHHHHHHTTTTS.ESEEEEEEEE CS
  Peptidase_M16_C  52 akptgepltpatlkkppvvlkkl........de.eqahlslafegpsk.endeddlalavlntlLgggmesrLytnlrekegl.aysvsafnds 134
                      +k ++++ t+a +k+++  lk+         +  ++a + ++  + s+ e+++++ a + l++l   g + r  ++l     l +++ +a+++ 
       EPX74495.1  12 PKLARRFATSALPKTETTTLKNGltiatehhPYaQTATVLVGVDAGSRaESEKNNGAAHFLEHLAFKGTKNRSQRALE----LeFENTGAHLNA 101
                      56667777777777777777777777755552225666666666666699******************8888888888....67********** PP

                      ESSCEEEEEEEEEECTTHHHHHHHHHHHH CS
  Peptidase_M16_C 135 yrdsglfgisatadpenveevvevilkel 163
                      y+    ++ +a a +e v ++v+v+ + l
       EPX74495.1 102 YTSREQTVYYAHAFKEAVPKTVAVLADIL 130
                      **999999999999998888887776554 PP

  == domain 2  score: 130.3 bits;  conditional E-value: 8.9e-42
                      CH-HHHHHHHHHHHSSGGGEEEEEEESS-HHHHHHHHHHHHTTSTHHSH..CSGSCTSSSSSGGGSSEEEEEEEESSSSSEEEEEEEEEECTCT CS
  Peptidase_M16_C   1 sltredlkefykkfYrpenmvlaivGdvdheelvkliekyfgdlkaska..ppakptgepltpatlkkppvvlkkldeeqahlslafegpsken 92 
                      sltr+dl +++k +Yr+++m la++G ++heelvkl+ekyfg+l+ s +  +      ++++ + + +++v+++++  ++a +++a eg s+ +
       EPX74495.1 189 SLTRDDLLTYIKDNYRSDRMILAAAGSISHEELVKLAEKYFGHLEPSTEqlS---LGAPRGPQPRFVGSEVRIRDDYSPTANIAIAVEGMSW-K 278
                      69*********************************************95541...22223333367889999999988**************.* PP

                      HTTHHHHHHHHHHHHSS.........TTSHHHHHHHTTTTSESEEEEEEEEESSCEEEEEEEEEECT.THHHHHHHHHHHHHHHHHHTS-HHHH CS
  Peptidase_M16_C  93 deddlalavlntlLggg.........mesrLytnlrekeglaysvsafndsyrdsglfgisatadpe.nveevvevilkelrklkkeglteeel 176
                      ++d+++  v++ ++g++         m srL + ++ + +la s+++f++sy+d+gl+gi++ +++  +++++v+ +l+ +++l+    t++e+
       EPX74495.1 279 HPDYFVGLVMQAIIGNWdramgasphMASRLSSVVQ-QDQLANSFMSFSTSYSDTGLWGIYLVTENLgRIDDLVHFTLQNWARLTVA--TRAEV 369
                      ************************************.****************************999******************9..***** PP

                      HHHHHHH CS
  Peptidase_M16_C 177 eraknql 183
                      e ak+ql
       EPX74495.1 370 ELAKAQL 376
                      *****97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (461 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       548  (0.030565); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 3046.23
//
Query:       EPX74496.1  [L=246]
Description: FRG1 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-20   73.9   0.3    4.4e-20   72.2   0.3    1.7  1  FRG1      FRG1-like domain
    4.4e-06   26.9   0.2    7.5e-06   26.1   0.2    1.4  1  Fascin    Fascin domain


Domain annotation for each model (and alignments):
>> FRG1  FRG1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.2   0.3     5e-24   4.4e-20      22     191 .]      83     245 ..      78     245 .. 0.81

  Alignments for each domain:
  == domain 1  score: 72.2 bits;  conditional E-value: 5e-24
        FRG1  22 egPdPeevftavkvasdekislKsgyGkYlgvdkegilsaraeAisseEqfev.vfeegktallalaketflsvdeekdivakskkaaeeevveiRsda 119
                 e+ + ++vf+a+ +  + ++ lKs   kYl+  keg l ++ eAi++eEq+++   ++g  a  +++++++l +             +e++   +R   
  EPX74496.1  83 EPDNTRQVFVASDM--NGNVVLKSFLMKYLSAGKEGDLFSKREAIGAEEQWQLqYLHDGYWAWKSMSNNKYLECLL-----------NENDTYVFRCTS 168
                 56788*********..7789********************************944578999***********9877...........233344455444 PP

        FRG1 120 er.egktkdrirvedreklrekeskyvkkfqkiqdkkl......rldkedvkrlkkarkeGnlhEvlLDrrvkmksDky 191
                  + ++++k r+rv+ r+  r   ++++k+   ++ ++l       l+++++k lk+a ++G+lhE+lLD+rv  ksDky
  EPX74496.1 169 DTvTFTSKWRVRVQTRFVKR-PSIQNIKQP-TVHSQQLeamvgrPLSSDEKKILKQASRDGSLHEALLDVRVSKKSDKY 245
                 44466899999999999554.455666654.34444444568978*********************************9 PP

>> Fascin  Fascin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.2   8.4e-10   7.5e-06      33     110 ..      95     178 ..      81     179 .. 0.84

  Alignments for each domain:
  == domain 1  score: 26.1 bits;  conditional E-value: 8.4e-10
                 TTSEEEEEEETTSEEEEE-TTSBEEEEESS--GGGEEEEEEE..TCEEEEEETTSCEEE..E..CTTTEEEEEESSSSGGGEEE CS
      Fascin  33 eesyavaLrshngkYlsldkdGrvvaeaetkeedtlFelefr..grwallresngryLg..i..gkeglLkasastvgkdelft 110
                 + + +v L+s++ kYls+ k+G + +++e   ++ +++l++   g wa ++ sn +yL+     +++ ++ ++++tv+ ++ + 
  EPX74496.1  95 DMNGNVVLKSFLMKYLSAGKEGDLFSKREAIGAEEQWQLQYLhdGYWAWKSMSNNKYLEclLneNDTYVFRCTSDTVTFTSKWR 178
                 3355678*********************************9989**************9543334556799*******999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       582  (0.0324614); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 1826.21
//
Query:       EPX74497.1  [L=897]
Description: origin recognition complex subunit Orc4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-45  153.9   2.5      4e-45  153.9   1.2    1.7  2  ORC4_C    Origin recognition complex (ORC) subunit 4 C-termin
    1.6e-13   51.4   0.2    5.6e-13   49.6   0.2    2.0  2  AAA_16    AAA ATPase domain
    5.7e-05   23.4   0.0    0.00024   21.4   0.0    2.0  2  AAA_22    AAA domain
    0.00011   22.7   0.0    0.00031   21.2   0.0    1.8  1  AAA       ATPase family associated with various cellular acti
     0.0018   17.9  43.6        0.2   11.6   3.6    4.9  4  AT_hook   AT hook motif
     0.0099   15.1   0.0      0.018   14.2   0.0    1.3  1  DUF815    Protein of unknown function (DUF815)
  ------ inclusion threshold ------
      0.021   14.9   0.0      0.049   13.7   0.0    1.6  1  AAA_14    AAA domain
      0.061   13.2   0.0       0.12   12.3   0.0    1.5  1  ATPase_2  ATPase domain predominantly from Archaea
      0.078   13.1   0.0       0.17   12.0   0.0    1.6  1  AAA_33    AAA domain


Domain annotation for each model (and alignments):
>> ORC4_C  Origin recognition complex (ORC) subunit 4 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.5   0.0       5.4   1.1e+04      56      73 ..     571     588 ..     565     601 .. 0.66
   2 !  153.9   1.2     2e-48     4e-45       2     219 .]     680     879 ..     679     879 .. 0.94

  Alignments for each domain:
  == domain 1  score: -4.5 bits;  conditional E-value: 5.4
      ORC4_C  56 svrallnslilpvsalsp 73 
                 s +++  +l+ ++++ls+
  EPX74497.1 571 SESSFADTLTRLLATLSH 588
                 555666666666666665 PP

  == domain 2  score: 153.9 bits;  conditional E-value: 2e-48
      ORC4_C   2 ickelLslpeeesseeasdsadakfleaWnksieell..edsafqellkrlyyltksvrallnslilpvsalspsspkitaesllsalesaapdsklsl 98 
                 i +++L++++ee          +k++ +Wn+++++ll  ++s++++l++ +yy+++++r+l+   ++pv++ sps+p ++++++ + ++  + d+k++l
  EPX74497.1 680 IYRSVLTIKDEEP--------ISKLRLEWNNRVNDLLsdSSSNMHKLVQYHYYSSRNLRMLYVDSLIPVTSRSPSQPLLNDSDF-QRFNLRVSDHKVEL 769
                 7899999999998........89**************988999*****************************************.99999********* PP

      ORC4_C  99 LrsLSeLeLaLLIaaarldeiydtdtvNFemaydeYkklakrakvqsssassqssasgalatgarvWgrdvalkawerLisleLllpagagsssessss 197
                 ++ LS LeLaLLI+  r  e +d  ++NF+ +y+eY+ l++r   +       ++asgal++++r+Wgrdval+awe+L+s++L++  + +   ++ s+
  EPX74497.1 770 VKNLSLLELALLICTIRF-ENRDIPACNFNSVYQEYRHLHQRTVLD-------AVASGALVHSFRLWGRDVALEAWEKLASVGLIVSLQPN---SEISG 857
                 ******************.************************888.......8999******************************8653...33667 PP

      ORC4_C 198 gggkefrmvrlevsleeikaav 219
                   ++e+++++ ev+l+ i aa+
  EPX74497.1 858 ALSRECQLWQPEVDLSVITAAL 879
                 7*****************9985 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.6   0.2   2.8e-16   5.6e-13       2     170 .]     477     641 ..     476     641 .. 0.74
   2 ?   -2.7   0.0       3.4   6.7e+03      72     107 ..     677     715 ..     649     765 .. 0.60

  Alignments for each domain:
  == domain 1  score: 49.6 bits;  conditional E-value: 2.8e-16
      AAA_16   2 lvGReeeleqLlsale.rvrsgrpelvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipysalaqalareellrqlldeaesaeleawre 99 
                 l+G eee ++L + ++ +v  g++++v+++G++ +GKs lv+++l+ ++++    l + +                   +l    l +++  +l++ ++
  EPX74497.1 477 LIGHEEEKSKLYRWMQqTVVLGEGNSVIIVGPRSSGKSLLVESVLQKARAE----LPESFYTV----------------RLNGTYLHDDK-VALREISR 554
                 88999999999776666****************************999999....55555555................22222222212.23333333 PP

      AAA_16 100 kleealaavpelagaea....srllellkrllallsrder............plvlvlDdlqwadeaslql.laaLlrlles.k.pllvv 170
                 +l  +l++   l++++a    s+++++l+rlla ls++++             +v++l++++ + ++++q+ l++L++ ++s k p+lv+
  EPX74497.1 555 QLSVELES---LDSEDAirseSSFADTLTRLLATLSHPADlgitkdglttsaSVVFILEEFDLFVQHPRQMlLYNLFDIAQSrKaPILVI 641
                 34444442...222222222488999999999888887889999999*99977***************************9987799997 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 3.4
      AAA_16  72 laqalareellrqlldeaesaeleawrekleeala.....a 107
                 ++++  r ++l+  ++e+ s+++ +w  +  + l+      
  EPX74497.1 677 FLKIY-R-SVLTIKDEEPISKLRLEWNNRVNDLLSdsssnM 715
                 55555.5.777777777777777777776666666444440 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       1.6   3.1e+03      51      71 ..     435     480 ..     420     499 .. 0.64
   2 !   21.4   0.0   1.2e-07   0.00024       5     132 ..     500     645 ..     496     650 .. 0.67

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 1.6
      AAA_22  51 t.sskdllrellralglelka........................e 71 
                   ++k++ ++l ++lgl++ +                         
  EPX74497.1 435 VsTPKEITNNLISELGLDKLDaelrifkttvtsrftgkasipligH 480
                 3489999999999999988885555555555555555555555554 PP

  == domain 2  score: 21.4 bits;  conditional E-value: 1.2e-07
      AAA_22   5 agilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsst..sskdllrellralglelka.....................erlsseelle 80 
                  ++++++G+  +GK++l++ +l+++      +e + ++++v l++    + k  lre+ r+l +el++                     ++ls  +   
  EPX74497.1 500 GNSVIIVGPRSSGKSLLVESVLQKAR-----AELPESFYTVRLNGTYlhDDKVALREISRQLSVELESldsedairsessfadtltrllATLSHPA--- 590
                 5789********************93.....22244444444444444366666888888888888888888877744444443333333344444... PP

      AAA_22  81 aleqalrarav............ielliiDEaqhlr...seealeeLrsllnlsrkgvqliLvGtpe 132
                           +             +++i++E++ +    ++ +l +L +++   + + +++++G + 
  EPX74497.1 591 ----------DlgitkdglttsaSVVFILEEFDLFVqhpRQMLLYNLFDIAQ--SRKAPILVIGLTA 645
                 ..........34555555555556**********775533666666766666..99****9999765 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   1.6e-07   0.00031       1     125 [.     503     662 ..     503     667 .. 0.72

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 1.6e-07
                 EEEESSTTSSHHHHHHHHHHHH......THEEEEEETTTCSSS.............................STTHHHHHHHHHHHHHHHTS....... CS
         AAA   1 vllyGppGtGKTllakavakel......gvefleisgsellsk.............................yvgesekkirelfkeakeka....... 57 
                 v+++Gp   GK+ll+++v +++      +++ ++++g+ l ++                             +    ++ +  l++++++ a       
  EPX74497.1 503 VIIVGPRSSGKSLLVESVLQKAraelpeSFYTVRLNGTYLHDDkvalreisrqlsvelesldsedairsessF----ADTLTRLLATLSHPAdlgitkd 597
                 6899*****************9444444466888888888844599999999999999999999887755541....2222222222233334445556 PP

                 .....TSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTSSSTEEEEEEESSGGGSTHHHHS..TTSS CS
         AAA  58 .....kpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkkeskvivigatnrpdkldpallr..gRfd 125
                      + ++++++E+d ++++            +  L++ +d  ++++++++vig t r+d +++   r  +Rf+
  EPX74497.1 598 glttsASVVFILEEFDLFVQHP----------RQMLLYNLFDIAQSRKAPILVIGLTARYDCFESLEKRvkSRFS 662
                 667634588888******9998..........689999********9************6665554432237775 PP

>> AT_hook  AT hook motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   5.0   0.00018      0.35       1      11 [.     129     139 ..     129     140 .. 0.92
   2 !   11.4   6.1   0.00012      0.23       1      11 [.     151     161 ..     151     163 .. 0.90
   3 ?    1.8   5.2      0.16   3.2e+02       2      10 ..     174     182 ..     173     185 .. 0.83
   4 !   11.6   3.6   9.9e-05       0.2       1      11 [.     275     285 ..     275     287 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00018
     AT_hook   1 kRkRGRPrKaa 11 
                 kR+RGRPrK++
  EPX74497.1 129 KRGRGRPRKYP 139
                 8********85 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00012
     AT_hook   1 kRkRGRPrKaa 11 
                 kRkRGRPrK+a
  EPX74497.1 151 KRKRGRPRKTA 161
                 8********98 PP

  == domain 3  score: 1.8 bits;  conditional E-value: 0.16
     AT_hook   2 RkRGRPrKa 10 
                 R RGRP+ +
  EPX74497.1 174 RNRGRPPLK 182
                 89****976 PP

  == domain 4  score: 11.6 bits;  conditional E-value: 9.9e-05
     AT_hook   1 kRkRGRPrKaa 11 
                 kR+RGRPrK +
  EPX74497.1 275 KRGRGRPRKIQ 285
                 8********76 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.0   8.9e-06     0.018      30      80 ..     477     527 ..     465     555 .. 0.91

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 8.9e-06
      DUF815  30 LvgidkqkealventeqfleglpannvLLwGarGtGKSslvkallneyaee 80 
                 L+g +++k++l +  +q +   + n v+++G r +GKS lv ++l+++++e
  EPX74497.1 477 LIGHEEEKSKLYRWMQQTVVLGEGNSVIIVGPRSSGKSLLVESVLQKARAE 527
                 89*******************************************998765 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   2.5e-05     0.049       3      39 ..     501     538 ..     499     571 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 2.5e-05
      AAA_14   3 kilvitGaRrvGKTtllkqlikell.vkkesilyinld 39 
                 + ++i+G+R +GK+ l++ ++++     +es+  + l+
  EPX74497.1 501 NSVIIVGPRSSGKSLLVESVLQKARaELPESFYTVRLN 538
                 5699****************999886556666666555 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0     6e-05      0.12      18      71 ..     498     559 ..     483     657 .. 0.67

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 6e-05
    ATPase_2  18 epneiyfiYGpegsGKtaLlkeiienledkdkyviyyialreesiskldefie........e 71 
                 ++ + + i Gp++sGK+ L+  ++++ +    + +y   l++ +++  +  ++        e
  EPX74497.1 498 GEGNSVIIVGPRSSGKSLLVESVLQKARAELPESFYTVRLNGTYLHDDKVALReisrqlsvE 559
                 556678899******************999999*******9999998888876333333321 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   8.7e-05      0.17       2      63 ..     503     583 ..     503     668 .. 0.63

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 8.7e-05
      AAA_33   2 vllvGlpGsGKstlaerllkklg........avllssdtlrrrlfgtdqqskt...........dytrvldrlyqilnela 63 
                 v++vG+  sGKs l+e++l+k          +v+l+  +l++  ++  + s +           d +r ++++ ++l +l+
  EPX74497.1 503 VIIVGPRSSGKSLLVESVLQKARaelpesfyTVRLNGTYLHDDKVALREISRQlsvelesldseDAIRSESSFADTLTRLL 583
                 799****************99987777887767777777555444422221111222222222244555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (897 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       795  (0.0443416); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.82u 0.30s 00:00:01.11 Elapsed: 00:00:00.48
# Mc/sec: 5673.71
//
Query:       EPX74498.1  [L=544]
Description: RNA polymerase II transcription elongation factor SpELL [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (544 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1615  (0.0900775); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.66u 0.26s 00:00:00.92 Elapsed: 00:00:00.44
# Mc/sec: 3755.67
//
Query:       EPX74499.1  [L=221]
Description: hypothetical protein SOCG_01983 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0062   15.1   0.7     0.0091   14.6   0.7    1.2  1  MFS_2     MFS/sugar transport protein
  ------ inclusion threshold ------
      0.044   13.4   0.1      0.084   12.5   0.1    1.4  1  MatE      MatE
       0.42   10.7   3.1       0.75    9.9   3.0    1.5  1  GWT1      GWT1


Domain annotation for each model (and alignments):
>> MFS_2  MFS/sugar transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.7   1.5e-06    0.0091     212     281 ..      92     156 ..      87     161 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1.5e-06
       MFS_2 212 slleqlkevfrnraflillllfllaalalgvlnglllYyltyvlg.ngsaasvfllvvtisallgiplwqp 281
                 ++++q+++v++n      +++++l +++l+v +  + Y++++v+g ++ +  +f++v ++ +++++++w+ 
  EPX74499.1  92 EWFKQIGRVLSN------MCAAVLCTASLNVPCYSVYYFVKKVIGfEKMDKGFFYFVCIVNVAVFVLFWST 156
                 678888888888......99999999999****************7777777777777999999**99986 PP

>> MatE  MatE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   1.4e-05     0.084     112     157 ..      71     117 ..      65     120 .. 0.95

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.4e-05
        MatE 112 krylrililgipalalqlvlsgilrgagktkvplyislisl.llnip 157
                 ++++ri+i++ ++++  ++++ +++ +g++   + ++++++  ln+p
  EPX74499.1  71 SKWIRIAIFFFCIFCSRICSKEWFKQIGRVLSNMCAAVLCTaSLNVP 117
                 6899*****************************************98 PP

>> GWT1  GWT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   3.0   0.00013      0.75      36     108 ..      55     128 ..      14     162 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00013
        GWT1  36 eekkkkkkkkesketlkllikllllsilllllllllelyvefvSRrlaNl.pYvlwvvalnltllllflliell 108
                 ++ ++++++  s +t +  i+++++ +++++  ++++ +++ + R+l N+ + vl +++ln+ + +++++++++
  EPX74499.1  55 HSAQESTNNAGSDSTYSKWIRIAIFFFCIFCSRICSKEWFKQIGRVLSNMcAAVLCTASLNVPCYSVYYFVKKV 128
                 234555667778888888888888888889999999999*9********8456788999*********999983 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       591  (0.0329634); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.37
# Mc/sec: 1810.91
//
Query:       EPX74500.1  [L=478]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.6e-93  311.0   4.9    4.6e-93  311.0   4.9    2.3  3  DUF2401   Putative TOS1-like glycosyl hydrolase (DUF2401)
    3.9e-26   91.2   0.1    8.1e-26   90.2   0.1    1.6  1  DUF2403   Glycine-rich protein domain (DUF2403)


Domain annotation for each model (and alignments):
>> DUF2401  Putative TOS1-like glycosyl hydrolase (DUF2401)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.1      0.12   1.1e+03      18      71 ..      30      83 ..      22      86 .. 0.77
   2 ?   -2.2   0.0      0.29   2.6e+03      39      64 ..     145     170 ..     111     184 .. 0.75
   3 !  311.0   4.9   5.2e-97   4.6e-93       1     229 []     235     467 ..     235     467 .. 0.98

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.12
     DUF2401 18 nlvFlnnkggksgsGvfdsalgnslsyassdgtsgassptvledvllssnkEii 71
                +  + n++ + + +Gv  s   n ++ ++s+++++ s+p+ + ++l++ ++E++
  EPX74500.1 30 GYYYCNQASEVEFKGVGFSSSYNRITGMDSESCECTSTPQSFGGSLAPFDEELS 83
                455666666777778777777888888999999999999999999999888875 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.29
     DUF2401  39 gnslsyassdgtsgassptvledvll 64 
                     +y+++dg+ + s+p+++  +++
  EPX74500.1 145 ILRTAYINADGSPVTSAPEAFPASTA 170
                 44568999999999999999877766 PP

  == domain 3  score: 311.0 bits;  conditional E-value: 5.2e-97
     DUF2401   1 gswkrvayYnaesgtaenlvFlnnkggksgsGvfdsalgnslsyassdgtsgassptvledvllssnkEiiifsdkkCedkdCgyyregivayhGfgGa 99 
                 ++w r++yY++es t++n+vF+nn+gg++gsGv++s++gns+sya+s+g++gassp+vl+d++l+s+kE++i+s++kC+++dCgyy +gi+ayhGf+G+
  EPX74500.1 235 SDWVRSSYYDSESSTSDNIVFMNNMGGTAGSGVWSSCFGNSISYAASNGVDGASSPQVLSDTMLKSDKEVSIWSANKCNGDDCGYYLSGIPAYHGFSGT 333
                 58************************************************************************************************8 PP

     DUF2401 100 kkvflfefsmpedkksssnkdmPAiWlLnakiprtaqYpgnaeCsCwksgCGelDifEvlesgseklkstlhtaqgae.....gggssdyfeRptdeti 193
                  kv+l+ef mp+d+++++ +dmPAiW+Lna++prt qY g++eCsCw+sgCGe+DifEvl+sg+ek+ stlh++qg++     g+gssdyf+Rpt +t+
  EPX74500.1 334 -KVVLMEFAMPHDDSTNFVNDMPAIWALNAQVPRTLQY-GKKECSCWDSGCGEFDIFEVLNSGNEKMVSTLHSKQGSQngaggGAGSSDYFSRPTGSTM 430
                 .9************************************.79***********************************999**9999************** PP

     DUF2401 194 kvavvfdseestvkiveldds.tdfdeslsaetvesl 229
                  +avvfd+++s v+++ +++s ++fd++ sa++++ +
  EPX74500.1 431 VGAVVFDTSSSAVYVIDVSKSgVNFDQTYSASDIAGW 467
                 *******************999**********99877 PP

>> DUF2403  Glycine-rich protein domain (DUF2403)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.2   0.1   9.1e-30   8.1e-26       2      63 .]      39     100 ..      38     100 .. 0.98

  Alignments for each domain:
  == domain 1  score: 90.2 bits;  conditional E-value: 9.1e-30
     DUF2403   2 aitytnvggsGsYkeVtsmdessgeCeteeksfsGplaPldeelSvhfRGPlkLkqfavYtp 63 
                 ++++++vg+s+sY+++t md++s+eC+++++sf G+laP+deelS+hfRGP++Lk+favY+p
  EPX74500.1  39 EVEFKGVGFSSSYNRITGMDSESCECTSTPQSFGGSLAPFDEELSFHFRGPVQLKRFAVYYP 100
                 799*********************************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (478 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       717  (0.0399911); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.33s 00:00:00.89 Elapsed: 00:00:00.50
# Mc/sec: 2854.18
//
Query:       EPX74501.1  [L=699]
Description: SCY1 protein kinase Ppk32 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      2e-21   76.5   0.0    4.1e-21   75.5   0.0    1.5  1  Pkinase      Protein kinase domain
    2.4e-11   43.4   0.0      5e-11   42.4   0.0    1.5  1  Pkinase_Tyr  Protein tyrosine kinase
  ------ inclusion threshold ------
       0.14   12.9   0.0       0.51   11.1   0.0    1.9  2  HIT          HIT domain


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.5   0.0   6.9e-25   4.1e-21      43     263 ..      76     312 ..      57     313 .. 0.86

  Alignments for each domain:
  == domain 1  score: 75.5 bits;  conditional E-value: 6.9e-25
                 HHHHHHHHHHHHHSCTTB--EEEEEEE.SSEEEEEEE--TTEBHHHHHH.............HHSS--HHHHHHHHHHHHHHHHHHH.HTTEE-SS-SG CS
     Pkinase  43 kkvlrEikilkklkhpnivrlyevfee.kdelylvleyveggeladlle.............rkgslseeeakkiakqilegleylH.skgiiHrDlKp 126
                 + ++r ++ l +l+hp +++++e +ee  ++l++v+  ++  +lad++              ++ +l+e e++k + q+++g+ +l  s++i+H  + p
  EPX74501.1  76 EVLRRDVSSLSRLRHPSLLQVVEPLEEsRSRLTFVTKRIQ-SSLADVICistpiagnsgdidNHLALDEIEVQKGLLQVMNGILFLKdSANILHLNIQP 173
                 788999*****************99994555668888888.66999988888999999988778889999****************98999******** PP

                 GGEEEETTTEEEE-SGTTSEESSSSCS.........BCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHH.SS-STTTSSHHHHHHHHHHTHHH CS
     Pkinase 127 eNiLidekgelKitDFGlakelesssk.........ltsfvgtseYlAPEvlkeneyskkvDvWslGvilyellt.gkppfsgekgkekvekeldqlek 215
                   + id+kg+ K++ FG+++  es             +s   + ++lAPE + ++ ++++ Dv+slG+++y +++ gk + s++++  ++e+e+++   
  EPX74501.1 174 RSVVIDSKGDWKLCGFGFCQSSESPRYelmdfdtstPSSLQQSLDFLAPEYVLHEIVGPENDVFSLGCLIYAVFNkGKSVISAKNNLLTYEREVNN--- 269
                 ********************999987799****99999**********************************997368888877777777777777... PP

                 HHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGG CS
     Pkinase 216 ilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpy 263
                     l + k+++   s  s+++++ll +ll+ +pk+R+ ++ + +++y
  EPX74501.1 270 ----L-NDKLQFYVGSIQSPSLRSLLLQLLSPNPKNRVDVAFMDSSDY 312
                 ....4.347889999999*******************98766655555 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.4   0.0   8.3e-15     5e-11      47     252 ..      77     304 ..      58     310 .. 0.80

  Alignments for each domain:
  == domain 1  score: 42.4 bits;  conditional E-value: 8.3e-15
                  HHHHHHHHHHTS-BTTB--EEEEEE.SSSSEEEEEE--TTEBHHHHHHHT...........CTTTSBHHHHHHHHHHHHHHHHHHHH.TTEEEST-SG CS
  Pkinase_Tyr  47 elleeakimkklkhpnivkllgvct.keepllivteyvkgGdLlkfLrkk...........ekekltlkdllsfalqvAkGmeyLes.kklvHrdlaa 131
                   l ++++ +++l+hp +++++     ++++l +vt+ +++ +L + +  +           ++ +l+  ++ +  lqv +G+ +L++  +++H ++  
   EPX74501.1  77 VLRRDVSSLSRLRHPSLLQVVEPLEeSRSRLTFVTKRIQS-SLADVICIStpiagnsgdidNHLALDEIEVQKGLLQVMNGILFLKDsANILHLNIQP 173
                  4567888999999999999999888444457777777765.7777777777899999998777788888899999**********862689******* PP

                  GGEEEEETTEEEE-STTTHEETTTSSEE......EETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHHHHHHTTSSGTTTTSHH....HHHHHHHH CS
  Pkinase_Tyr 132 rNvLlsenkvvkisDfGLardiekddey......vkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglkn....eevleklk 219
                  r v+++++   k++ fG +++ e+  +       ++ ++ + ++ ++apE + ++ +  + Dv+s G l++ +f++g+s ++  +n    e+ +++l+
   EPX74501.1 174 RSVVIDSKGDWKLCGFGFCQSSESPRYElmdfdtSTPSSLQQSLDFLAPEYVLHEIVGPENDVFSLGCLIYAVFNKGKSVISAKNNlltyEREVNNLN 271
                  ********************9977666644443334445566789*********************************98766655111155667788 PP

                  TTEES-BBTTSBHHHHHHHHHHT-SSGGGS--H CS
  Pkinase_Tyr 220 egkrlekpekcpeelyelmkkcweedpeeRptf 252
                  ++ +    +  +++l +l+ + ++ +p++R + 
   EPX74501.1 272 DKLQFYVGSIQSPSLRSLLLQLLSPNPKNRVDV 304
                  888888889999999999999999999999876 PP

>> HIT  HIT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       1.6   9.7e+03      44      63 ..      95     119 ..      73     137 .. 0.70
   2 ?   11.1   0.0   8.6e-05      0.51      23      68 ..     548     594 ..     529     624 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 1.6
                 C.....HHHHHHHHHHHHHHHHHHH CS
         HIT  44 t.....eeelakllsavkkvakalq 63 
                 +     ee +++l+ ++k++++ l 
  EPX74501.1  95 QvveplEESRSRLTFVTKRIQSSLA 119
                 0334555888889999998888765 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 8.6e-05
                 -SSSSEEEEEESS.TGCSGGGCCHHHHHHHHHHHHHHHHHHHTCTTC CS
         HIT  23 pkapghlLvipkk.hlselhdlteeelakllsavkkvakalqkkfkn 68 
                 p+  +h Lv+p+   ls +++l+ +e ++++++++k+  ++q + k+
  EPX74501.1 548 PEESVHELVMPRLwVLSASSELSVQEYSQFMREIRKLSDYIQIEHKK 594
                 78889********99**************************997753 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (699 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       621  (0.0346366); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.24s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 4908.59
//
Query:       EPX74502.1  [L=203]
Description: GINS complex subunit Psf1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-06   28.6   0.1    3.9e-06   27.3   0.1    1.7  2  Sld5      GINS complex protein


Domain annotation for each model (and alignments):
>> Sld5  GINS complex protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.3   0.1   2.2e-10   3.9e-06       4     108 ..      26     122 ..      17     125 .. 0.76
   2 ?   -2.2   0.0      0.32   5.7e+03      17      39 ..     147     171 ..     139     186 .. 0.74

  Alignments for each domain:
  == domain 1  score: 27.3 bits;  conditional E-value: 2.2e-10
                 EHHHHHHHHHTTSCCCHHCHHHCHHHHHHCCCHHTTS..............SSSTTTTTTHHHHHHHHHHHHT.HCHHHHHHHHHHHHHHHHHHHTHCH CS
        Sld5   4 PlWlaelLkrqrrveieppewlspesleailedetks..............sdlpslpphflelavkllelardldelkrllrdllevRlakirkfaen 88 
                 P+++++ +               +e++++i+++e++s               ++  +p     l + +++   +    kr+l++++++Rl+ ir++++n
  EPX74502.1  26 PPYQTDTV---------------NEVIREIRTAERESlgilqaltnggevaFNPMEHPSEASSLLMFHTSNLYN----KRCLMAYHNLRLRSIRQYCWN 105
                 44444444...............555666666666666666666665555577778888888888899999999....********************* PP

                 HHHHHHTS-TCCHCCS-HHH CS
        Sld5  89 ledaagggggellsglseeE 108
                  ++     +  ++++l++ E
  EPX74502.1 106 GGKRM---EACIDTSLNQAE 122
                 *9999...777777777777 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.32
                 CCCHHCHHH..CHHHHHHCCCHHTT CS
        Sld5  17 veieppewl..spesleailedetk 39 
                 ++++pp++l    ++l+++ + et+
  EPX74502.1 147 ASVVPPKNLfiDVRVLKDVGDIETE 171
                 6788888887777788877777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1457.29
//
Query:       EPX74503.1  [L=434]
Description: actin-like protein Arp4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.2e-134  448.9   0.0   1.4e-134  448.8   0.0    1.0  1  Actin     Actin
    5.3e-05   22.2   0.0       0.17   10.7   0.0    2.1  2  MreB_Mbl  MreB/Mbl protein
  ------ inclusion threshold ------
      0.071   12.9   0.0       0.13   12.0   0.0    1.3  1  DUF1134   Protein of unknown function (DUF1134)


Domain annotation for each model (and alignments):
>> Actin  Actin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  448.8   0.0  2.4e-138  1.4e-134       1     407 []       9     434 .]       9     434 .] 0.96

  Alignments for each domain:
  == domain 1  score: 448.8 bits;  conditional E-value: 2.4e-138
       Actin   1 gdevsavVlDnGssttraGyagedaPkavipslvgkprgrkveaklyvgdealt.krpelevrspvedGvvedwdaveelwehvlkeelkvdpeehpll 98 
                 gdevsa+V+D+Gs++tr+G++ged+Pk+v+ps +g+ ++     + ++g+e++  + +++e+++ v++G+++ wda+ +lw+++lke+lk+dp+ehp+l
  EPX74503.1   9 GDEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSNYGEFEDG----RRLFGEEYIYqPHKGMEIKRCVSNGWIQQWDATLDLWQYALKERLKTDPSEHPIL 103
                 599************************************9....89*****77758******************************************* PP

       Actin  99 ltepplnppkqrekalEivfEkfkvpalylaksavlsafasgkstglvvDsGasvtsvvpVldGyvLkkairrsdlgGkaLteqlkellssknvevtpr 197
                 +tep  np+++r k++E+vfE+++ pa+yla+++ ++afasgk t++++D+G++++sv++++dG+vL+k +  ++++G aL+e ++ +l++k  e +p+
  EPX74503.1 104 VTEPFDNPSENRVKTMEMVFESLGSPATYLARQEACAAFASGKGTACLIDVGYDRASVSAIHDGFVLQKPYNVQQFAGAALDEIIADTLRRKGYETVPK 202
                 *************************************************************************************************** PP

       Actin 198 ylikkkkvveaessae.keelekltesyktleeeevleeiKesvcevsedpegdeeksssspeksYeLPDgseiklgeeRfkvpEiLFdpsligsesal 295
                 yl+++k++v  ++s++ ++ + ++tes++ ++ e+v++e+Ke++   ++ p+   +++++  ++++e+PDg ++++g++R+++pE LF+ps+ ++ +++
  EPX74503.1 203 YLVRSKHPVGVGESPKyERANINTTESFHRFQLERVYDEWKEECALTADVPF---DSDHTILDSEFEFPDGARVVFGADRYQIPERLFKPSEDTTMNEQ 298
                 *********9999988788899*****************************9...678899*****************************875555554 PP

       Actin 296 eee....................kskllgiselivaainacdvdlrpeLlanivvtGGnsllpglteRlekelaqlaskgvkvkiiapee..erkysaW 372
                 ++e                    + k++gi++l++++i++cdvd+r+ L++nivv+GG+sll+g++ Rl+++l++ +++g ++ki+a+++  er+y++W
  EPX74503.1 299 NDEnenekdgdgdgddeekkntsNPKTKGICQLFQNCISECDVDIRNALFNNIVVCGGTSLLQGFSIRLQNDLSK-IYPGNRLKIHASGHiiERSYASW 396
                 444589***************999999************************************************.9********************** PP

       Actin 373 iGGSiLAslgtfqqlwvskqEYeEqGss...vverkck 407
                 +GGSiL+slgtf+qlw+s+qEY+E+G++   ++e++ck
  EPX74503.1 397 LGGSILSSLGTFHQLWISRQEYDEHGADrlaLIEKRCK 434
                 ***************************988899**997 PP

>> MreB_Mbl  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.0   2.8e-05      0.17      50     191 ..      57     195 ..      52     220 .. 0.82
   2 !    9.3   0.0   7.2e-05      0.43     248     296 ..     323     370 ..     313     376 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 2.8e-05
                 TTS-GTTEEEE-SEETTEESSHHHHHHHHHHHHHHHHTSS-SS--EEEEEE-SS--HHHH.HHHHHHHHHTT-SEEEEEEHHHHHHHHTT--TTSSS-E CS
    MreB_Mbl  50 lgktpgnikavrPlkdGviadlevaeellkyfikkvkkkkslskprvvicvPsgitever.rAvkeaakkaGarevllieeplaAAiGaglpveepsgn 147
                 + + ++ +++ r +++G i++ +++ +l +y +k+  k++  s+  ++++ P +  + +r + ++ + +++G+   +l  +   AA  +g         
  EPX74503.1  57 IYQPHKGMEIKRCVSNGWIQQWDATLDLWQYALKERLKTDP-SEHPILVTEPFDNPSENRvKTMEMVFESLGSPATYLARQEACAAFASGK-----GTA 149
                 667788999*************************9998755.5566899999987766662666777899****************99984.....345 PP

                 EEEEE-SS-EEEEEEETTEEEEE..EEES-SHHHHHHHHHHHHHHH CS
    MreB_Mbl 148 mvvdiGggttevavislggivts..ksvrvaGdeldeaiikyirkk 191
                  ++d+G   ++v+ i  g + ++  +  + aG +lde i + +r+k
  EPX74503.1 150 CLIDVGYDRASVSAIHDGFVLQKpyNVQQFAGAALDEIIADTLRRK 195
                 689************877666542234567**********999986 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 7.2e-05
                 HHHHHHHHHHHHHHHTS-HHHHHHHHHH-EEEESGGGGSBTHHHHHHHH CS
    MreB_Mbl 248 epvsaiveavkevLektppeLaadivdrgivltGGgallkgldkllsee 296
                  + + i++  ++ + ++  ++   +++  iv++GG++ll+g+   l++ 
  EPX74503.1 323 PKTKGICQLFQNCISECDVDIRNALFN-NIVVCGGTSLLQGFSIRLQND 370
                 556677788888888888888777665.6999**********9988875 PP

>> DUF1134  Protein of unknown function (DUF1134)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   2.1e-05      0.13      16      53 ..     108     145 ..     103     151 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.1e-05
     DUF1134  16 fGkvseglakvvekvfkeqGrPnayilGeeaggalvvG 53 
                 f + se+  k++e vf++ G+P +y++ +ea +a++ G
  EPX74503.1 108 FDNPSENRVKTMEMVFESLGSPATYLARQEACAAFASG 145
                 6677889999*************************988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (434 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       544  (0.0303419); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 3014.81
//
Query:       EPX74504.1  [L=1173]
Description: DNA-directed RNA polymerase I complex subunit Rpa2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   2.4e-113  379.1   0.0   6.1e-113  377.8   0.0    1.6  1  RNA_pol_Rpb2_6  RNA polymerase Rpb2, domain 6
    4.6e-39  134.0   0.0      7e-39  133.4   0.0    1.2  1  RNA_pol_Rpb2_1  RNA polymerase beta subunit
    7.2e-28   96.6   0.0    1.8e-27   95.3   0.0    1.7  1  RNA_pol_Rpb2_3  RNA polymerase Rpb2, domain 3
    4.1e-23   82.0   0.0    7.1e-23   81.2   0.0    1.4  1  RNA_pol_Rpb2_2  RNA polymerase Rpb2, domain 2
    2.1e-22   78.9   0.0    4.5e-22   77.8   0.0    1.6  1  RNA_pol_Rpa2_4  RNA polymerase I, Rpa2 specific domain
      5e-16   58.9   0.9    7.3e-15   55.1   0.9    2.5  1  RNA_pol_Rpb2_7  RNA polymerase Rpb2, domain 7
  ------ inclusion threshold ------
       0.29   11.2   1.2       0.83    9.8   0.2    2.2  2  zf-Sec23_Sec24  Sec23/Sec24 zinc finger


Domain annotation for each model (and alignments):
>> RNA_pol_Rpb2_6  RNA polymerase Rpb2, domain 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  377.8   0.0  2.4e-116  6.1e-113       1     390 []     684    1049 ..     684    1049 .. 0.92

  Alignments for each domain:
  == domain 1  score: 377.8 bits;  conditional E-value: 2.4e-116
                      HHHT-SS-TTB-HHHHHHHHHHGGGB-S---TTTTT---SSEEEESS----SSB-S.TTTTTS........GGGS-SEEEEEBBBS--TTTTT CS
  RNA_pol_Rpb2_6    1 vaklapvvehvqspriiiqaamekqalgiyslnkfkrsnqktyllcinqkPlvktgdkveagqvldgpatekgelalGqnavVAvmsyeGYni 93  
                      va+ +p+++ +qspr+++q++m+kq++g+  +   +r+++k+y+l++ q+P+v+ +  ++ ++        ++++++G+na+VAv+sy+GY++
      EPX74504.1  684 VANMTPFSDFNQSPRNMYQCQMGKQTMGTPGTALRYRTDNKLYRLQTGQTPVVRPK-LHNTYG--------MDHFPNGTNAIVAVISYTGYDM 767 
                      6999****************************************************.999999........9********************* PP

                      TT-EEEBCHHHHTTTT-EEEEEE..EEE--SSSS---.-S--..-.....-SS-GGGS-TTSB--SS-EEETT-EEE---..B-----...-- CS
  RNA_pol_Rpb2_6   94 EDaiilnerlvdrdvftsihikeyeveardtklgeeeitrdipnv.....seealkkLdedGivrvgaevkegdilvgkvtkgeteltpeekl 181 
                      EDa+iln+++ +r++   +++k  +v+  ++++  e ++++         ++e l+k+d dG+++vg+ +++gd++v ++             
      EPX74504.1  768 EDAMILNKSAHERGFGYGTVYKGESVDLGQKRRRGEPVVHHFGFApgsspRREWLQKVDADGLPYVGTMLEDGDPMVAYY------------- 847 
                      ***********************999995555444444444333334478999**************************7............. PP

                      ---------..-B---EE--TT-EEEEEEEEE.......EE-TT--EEEEEEEEEEE---TT-BEEETTS---BBEEEB-TTTSEEETTS--- CS
  RNA_pol_Rpb2_6  182 lraifgekarevkdtslrvksgeegvVdkvkvfsrekgdelkagvnklvkvyvaqkRklqvGDKfasrhGqKGvvslilpqeDmPfledGivv 274 
                             ++++ ++   +++ +e+g+Vd+v++     g++  ++ ++ ++++++ +R + +GDKf+srhGqKG++s+ +p  DmPf+e+G+++
      EPX74504.1  848 -------DESTGQNFVETYHGTEPGFVDEVRL----IGNDVGDSECQQIHIKFRITRSPIIGDKFSSRHGQKGICSQKWPAVDMPFTESGMQP 929 
                      .......2222345566789999*********....688889999************************************************ PP

                      SEEE-GGGCHHH-BTTHHHHHHHHHCCCSSSS--B--TT-.......-HHHHHHHHHTTS-TT-EE-EEETTTS-B-SS-EEB-EEEEEEBS- CS
  RNA_pol_Rpb2_6  275 DivlNPlgvPSRmtigqllEtllgkaaalegkkvdatvFdgak....eeeikelLeeagleasGkevlydGrtGekleaeifvGviYylkLkh 363 
                      Di++NP+++PSRmtig+ +E+l+gka+a++g   d+t+F  ++    ++++ e+L ++g++++G+e +y+G+tG++++a+i++Gv+Yy++L+h
      EPX74504.1  930 DIIINPHAFPSRMTIGMFVESLAGKAGACQGLAQDSTPFIFSEqqtaSDYFGEQLVKSGYNYHGNEPMYSGITGKEMHADIYIGVVYYQRLRH 1022
                      **************************************9876655545********************************************* PP

                      -CCCS----SS--B-TTT--B-SCGGG CS
  RNA_pol_Rpb2_6  364 lvedKihaRstGpyslltqQPlgGkaq 390 
                      +v+dK+++R+tGp+++lt+QP++G+++
      EPX74504.1 1023 MVNDKFQVRTTGPIHNLTRQPIKGRKR 1049
                      *************************86 PP

>> RNA_pol_Rpb2_1  RNA polymerase beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.4   0.0   2.7e-42     7e-39       3     187 ..      29     409 ..      27     429 .. 0.93

  Alignments for each domain:
  == domain 1  score: 133.4 bits;  conditional E-value: 2.7e-42
                     THHHHHHHHHH.........HHTHHHHHCTTSSECCHCSSSHCSSSCEEEEEEEEEEESCSSEC..TTSCEEES.HHHHHHCTSBXEEEEEEEEE CS
                     xxxxxxxxxxx.........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  RNA_pol_Rpb2_1   3 vsqqldSFnkf.........veqdlekiikeeaaieseeeiqssgeelelkfvsirlgkPvvde..sdasereiyPkearlrnltYsaplyvklk 86 
                     ++++++SFn++         v++  ek i ++ + e  + + + g++l+  + +++++kP+ ++      +r++yP ear+r ++Y++ l +kl 
      EPX74504.1  29 TKPHVQSFNALtdagllnlaVKEIGEKTIFDSITQE--NGNLKFGNKLSFRVDEVQIAKPMLSSreRTSINRKVYPAEARERLTSYKSRLVLKLS 121
                     689********8888666666666666666543333..333345677**************9984455899************************ PP

                     EEECCCCTCCEEEEEEEEEEEEEXBTTSTTSSSTTS.HHHHHHTTS.TTS..SSEEETTCEEEEXEEEE.......................... CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......................... RF
  RNA_pol_Rpb2_1  87 lvvyekdnkeeikeeevyiGelPlMlrskacvlseaseeelvelkEcpldqGGyFiinGtekvivaqek.......................... 155
                     ++v    n+   + e  ++G lP+M+rs++c+l+++++ el+++kE+++++GGyFi+nG+ek+i++++                           
      EPX74504.1 122 WSV----NNGPRQTEMREVGMLPIMVRSNRCHLEGLPPAELIAHKEESEEMGGYFIVNGIEKLIRMLILpkrnhptalirpsfanrgnsysqygl 212
                     ***....7888899999***************************************************9************************** PP

                     ............................................................................................... CS
                     ............................................................................................... RF
  RNA_pol_Rpb2_1 156 ............................................................................................... 155
                                                                                                                    
      EPX74504.1 213 sircvradessltntlhylnngvtmfrfhwrkneylipsmmilkalvetsdkeifegivgndlentfltdrvelmlrayksyglytqtetlqylg 307
                     *********************************************************************************************** PP

                     ......................................................................XHHHHHHHHHHHHHHHHHHHHHHHH CS
                     ......................................................................xxxxxxxxxxxxxxxxxxxxxxxxx RF
  RNA_pol_Rpb2_1 156 ......................................................................laGeLlaslfrvllkklerdvkerl 180
                                                                                           l+G L+ ++++++++ + + ++ ++
      EPX74504.1 308 skfrvvlgvaedltdvevgrflikkvvlvhlseprdkfrlllfmirklyalvageccadnpdspqhqeilLGGFLYGQILKEKIEDWLNSIRTQI 402
                     *********************************************************************************************** PP

                     HHHHCTS CS
                     xxxxxxx RF
  RNA_pol_Rpb2_1 181 qkslekl 187
                     ++++ ++
      EPX74504.1 403 NMDMRRN 409
                     9999876 PP

>> RNA_pol_Rpb2_3  RNA polymerase Rpb2, domain 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.3   0.0   6.9e-31   1.8e-27       2      68 .]     462     526 ..     461     526 .. 0.98

  Alignments for each domain:
  == domain 1  score: 95.3 bits;  conditional E-value: 6.9e-31
  RNA_pol_Rpb2_3   2 vldrlnplselshlrrvsslrgglskerkttevRdlhpshwGriCpveTPEGencGlvksLallarv 68 
                     v+++ln++++lsh+r v+  rg++++e ktt+vR+l p++wG++Cpv+TP+G++cGl+++La  + +
      EPX74504.1 462 VAEKLNFYRFLSHFRMVH--RGAFFAELKTTTVRKLLPEAWGFMCPVHTPDGAPCGLLNHLARKCDI 526
                     89****************..********************************************987 PP

>> RNA_pol_Rpb2_2  RNA polymerase Rpb2, domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.2   0.0   2.8e-26   7.1e-23       2     189 ..     189     376 ..     188     377 .. 0.85

  Alignments for each domain:
  == domain 1  score: 81.2 bits;  conditional E-value: 2.8e-26
                     TSCEEEEE-SSSSSE..........SSSCCEECCCEEEEECCCCSTSCEEEEECTTSSSEEEHHHHHHHTT--STTHHHHHHTS...SSTTHHHH CS
  RNA_pol_Rpb2_2   2 sngiyvekekdknki..........satvtsslisqrgsvlklekdgktliwtriskkrkipivivlkAlglvsdreIlericy...dsedsqll 83 
                     +n++ +  +++  ++          ++ v+++++s ++ +++l+++   ++++++++++ ip +++lkAl  +sd+eI+e+i++   +++   + 
      EPX74504.1 189 RNHPTALIRPSFANRgnsysqyglsIRCVRADESSLTNTLHYLNNGVTMFRFHWRKNEYLIPSMMILKALVETSDKEIFEGIVGndlENTFLTDR 283
                     57777777777777777788888888*********************************************************955322233456 PP

                     HHHHHHHHHHCTSSSCHHHHHHHHH...CSSTTSSSCCCCCHHHHHHHCHHHHHHHTTTTSSTTTTTSSSTCHH..HHHHHHHHHHHHHHHHTTS CS
  RNA_pol_Rpb2_2  84 eelleeleekeeiqtqeealdyigk...vvalrrgeearlqsareilqkrydlgeigreklnkhlglseslenkrlkaqdilymidrLlslklgr 175
                      el+ ++ +   ++tq+e l+y+g+   vv    ++ ++++++r +         i + +l+ hl  se+  ++  k++ +l+mi++L+ l +g+
      EPX74504.1 284 VELMLRAYKSYGLYTQTETLQYLGSkfrVVLGVAEDLTDVEVGRFL---------IKKVVLV-HL--SEP--RD--KFRLLLFMIRKLYALVAGE 362
                     78999999999**************886666777888899999944.........4566666.65..556..44..******************* PP

                     SSS--TTSGGGEEE CS
  RNA_pol_Rpb2_2 176 revDDiDhlgnkRv 189
                     +  D+ D+ +++++
      EPX74504.1 363 CCADNPDSPQHQEI 376
                     ***********998 PP

>> RNA_pol_Rpa2_4  RNA polymerase I, Rpa2 specific domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.8   0.0   1.8e-25   4.5e-22       1      58 []     567     635 ..     567     635 .. 0.98

  Alignments for each domain:
  == domain 1  score: 77.8 bits;  conditional E-value: 1.8e-25
  RNA_pol_Rpa2_4   1 iGyvspkeakavaktLRrlKve...........gekkvpltlEIglvppskggqYpGLYlftspaRmmR 58 
                     +G++++ +a++va+ LR+lK++           +++kvpl+lEIglvpps+ggq+pGL+lf+++aRm+R
      EPX74504.1 567 VGWCTHRLAAHVANVLRNLKIQyaaaerngtltEKPKVPLDLEIGLVPPSHGGQFPGLFLFSNTARMVR 635
                     8****************************999768*********************************9 PP

>> RNA_pol_Rpb2_7  RNA polymerase Rpb2, domain 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.1   0.9   2.9e-18   7.3e-15       1      85 [.    1051    1171 ..    1051    1173 .] 0.92

  Alignments for each domain:
  == domain 1  score: 55.1 bits;  conditional E-value: 2.9e-18
                      BBEEEEHHHHHHHHHHTBHHHHHHHHTTTTTEEEEEEESSSSSCCCEE....................................EBTTTTCSS CS
  RNA_pol_Rpb2_7    1 GGlrfGEMErdaliayGaaalLkerltikSDavevdvcgrckllaaan....................................eCkivksee 57  
                      GG+rfGEMErda+i++G++ l+++rl+  SD  + +vc++c+ + +                                      + +   + +
      EPX74504.1 1051 GGIRFGEMERDAVIGHGTSFLMQDRLMNCSDYAQSWVCRDCGSIISPMstismsgsgassevkcracakpaggledanltwedgTGHKFVGGS 1143
                      9*****************************************98775578999***************************9999788888888 PP

                      SEEEEEEEHHHHHHHHHHHHTTBEEEEE CS
  RNA_pol_Rpb2_7   58 kiekveipeafklLlqeLqslgialkll 85  
                      +++ v +p  f+ L+ eL +++i++ l+
      EPX74504.1 1144 NTTLVALPSVFNYLTAELAAMNIKMMLD 1171
                      8889999***************999775 PP

>> zf-Sec23_Sec24  Sec23/Sec24 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       1.2   3.2e+03      12      33 ..     688     710 ..     685     714 .. 0.73
   2 ?    9.8   0.2   0.00032      0.83       3      29 ..    1087    1117 ..    1086    1120 .. 0.73

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 1.2
  zf-Sec23_Sec24  12 Npfckidfg.gkrwiCnfCnhkn 33 
                      pf+ + ++  ++++C++ ++  
      EPX74504.1 688 TPFSDFNQSpRNMYQCQMGKQTM 710
                     599999777357799*9977765 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00032
  zf-Sec23_Sec24    3 rCrrCraylNpfckidfg....gkrwiCnfC 29  
                       Cr C++++ p+++i  +    ++  +C  C
      EPX74504.1 1087 VCRDCGSIISPMSTISMSgsgaSSEVKCRAC 1117
                      5**************5552222455888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1173 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       367  (0.0204696); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.74u 0.29s 00:00:01.03 Elapsed: 00:00:00.45
# Mc/sec: 7851.11
//
Query:       EPX74505.1  [L=336]
Description: manganese ion transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-57  191.9   4.3    2.7e-19   68.9   0.1    3.2  3  Mito_carr        Mitochondrial carrier protein
  ------ inclusion threshold ------
      0.014   14.6   2.2      0.091   11.9   0.1    3.1  5  Serine_protease  Gammaproteobacterial serine protease
      0.019   15.0   0.6      0.098   12.7   0.0    2.4  3  DUF2109          Predicted membrane protein (DUF2109)


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.9   0.1   4.5e-23   2.7e-19       2      93 ..      21     134 ..      20     138 .. 0.86
   2 !   59.1   0.0   4.9e-20   2.9e-16       4      95 ..     139     234 ..     136     236 .. 0.92
   3 !   64.6   0.2   9.8e-22   5.9e-18       4      95 ..     249     334 ..     246     336 .] 0.93

  Alignments for each domain:
  == domain 1  score: 68.9 bits;  conditional E-value: 4.5e-23
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS......................HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHH CS
   Mito_carr   2 elsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaa......................ildvlkkiykeeGlrglyrGllpnllrvapa 78 
                 ++++++++++++++  ++tl++tP+dvvKtrlq+++ s+ +s+ ++                       ++ l +i ++eG+r l+rGl+p+l++ +pa
  EPX74505.1  21 DVKPMAKMVSACVGSFITTLAVTPFDVVKTRLQSESMSAFTSTEGNaiqssvkttavqnplkarhltgPVSGLFQIARNEGIRNLWRGLVPSLTMLIPA 119
                 578899****************************6666655555445666667777777788888999******************************* PP

                 HHHHHHHHHHHHHHH CS
   Mito_carr  79 salkfvlyetlkrll 93 
                 ++++f++ye l  l+
  EPX74505.1 120 NVVQFLMYERLLLLY 134
                 *********987665 PP

  == domain 2  score: 59.1 bits;  conditional E-value: 4.9e-20
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS....HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkksskksksaa....ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                  +++  +aG+ a +v+++++ P+++ +tr+q++++++   + +     +++ l+++++++G ++l+ G++++l r +p sa ++++ye ++ ++l+
  EPX74505.1 139 FPASAAIAGASARTVSASIVSPIELFRTRVQAAGGHYPPGHTGDiakeVFQGLQRMIQQKGYLSLWNGVGVTLWRDVPFSAFYWWAYERTRWFFLQ 234
                 567789******************************998877779999*****************************************9988865 PP

  == domain 3  score: 64.6 bits;  conditional E-value: 9.8e-22
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                  ++ ++++Gg++g++atl+t+P+dv Kt  q+++++ +        ++l ++y + G r+l++G lp++++vap+ a++ ++y  +k+++ +
  EPX74505.1 249 DLYVNFMSGGISGVMATLLTQPFDVSKTARQVHGHTVSRG------QILVTLYSKGGARALWKGTLPRCVKVAPSCAIMISTYHATKKYFSE 334
                 67889*******************************8874......589****************************************976 PP

>> Serine_protease  Gammaproteobacterial serine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1      0.19   1.1e+03      12      38 ..      33      58 ..      27      77 .. 0.66
   2 ?   -2.4   0.0      0.35   2.1e+03      14      27 ..      71      84 ..      47     114 .. 0.52
   3 ?   -1.6   0.0      0.19   1.1e+03      14      54 ..     150     191 ..     137     198 .. 0.67
   4 ?   11.9   0.1   1.5e-05     0.091     171     213 ..     248     291 ..     243     297 .. 0.80
   5 ?    0.8   0.0     0.036   2.2e+02      37      75 ..     290     328 ..     283     335 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.19
  Serine_protease 12 visfsvsaltsPfkalLtnlqkdgsvl 38
                     v sf       Pf ++ t+lq +  ++
       EPX74505.1 33 VGSFITTLAVTPFDVVKTRLQSES-MS 58
                     555666666778888888888764.32 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.35
  Serine_protease 14 sfsvsaltsPfkal 27
                     s+   a+++P+ka 
       EPX74505.1 71 SVKTTAVQNPLKAR 84
                     33334555555553 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 0.19
  Serine_protease  14 sfsvsa.ltsPfkalLtnlqkdgsvlpsaysgGlfralYrGf 54 
                      + +vsa + sP++ + t++q  g   p +  g + + +++G 
       EPX74505.1 150 ARTVSAsIVSPIELFRTRVQAAGGHYPPGHTGDIAKEVFQGL 191
                      444443256888888888888888888666666888888776 PP

  == domain 4  score: 11.9 bits;  conditional E-value: 1.5e-05
  Serine_protease 171 delynkllaGalsGviAtvlttifnsykD.kkllaskvengrll 213
                      ++ly ++++G +sGv+At+lt +f   k  +++   +v  g++l
       EPX74505.1 248 KDLYVNFMSGGISGVMATLLTQPFDVSKTaRQVHGHTVSRGQIL 291
                      688999******************98776144555677888876 PP

  == domain 5  score: 0.8 bits;  conditional E-value: 0.036
  Serine_protease  37 vlpsaysgGlfralYrGflayalagskrravaVtakktn 75 
                      +l + ys+G  ral++G+l+  ++     a+ +++ +++
       EPX74505.1 290 ILVTLYSKGGARALWKGTLPRCVKVAPSCAIMISTYHAT 328
                      5556899999**********8888777777766665555 PP

>> DUF2109  Predicted membrane protein (DUF2109)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.3      0.37   2.2e+03      59      71 ..      60      72 ..      24      76 .. 0.54
   2 ?   -2.7   0.0         1   6.1e+03      32      41 ..     137     146 ..     120     157 .. 0.58
   3 ?   12.7   0.0   1.6e-05     0.098      21      49 ..     244     272 ..     241     286 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.37
     DUF2109 59 gsTlesNAiAstl 71
                ++  e NAi s++
  EPX74505.1 60 FTSTEGNAIQSSV 72
                3444667777666 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1
     DUF2109  32 lnFaiaalia 41 
                  nF  +a+ia
  EPX74505.1 137 WNFPASAAIA 146
                 4555555555 PP

  == domain 3  score: 12.7 bits;  conditional E-value: 1.6e-05
     DUF2109  21 nraekLlylnvlnFaiaalialliktplg 49 
                 ++ +k ly+n ++ +i++++a+l+ +p+ 
  EPX74505.1 244 DNSKKDLYVNFMSGGISGVMATLLTQPFD 272
                 677899*********************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (336 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       508  (0.028334); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2530.61
//
Query:       EPX74506.1  [L=115]
Description: hypothetical protein SOCG_05195 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
       0.62   10.7   7.4          4    8.1   7.4    1.9  1  Syntaxin-6_N  Syntaxin 6, N-terminal


Domain annotation for each model (and alignments):
>> Syntaxin-6_N  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   7.4   0.00022         4      39      85 ..      30      78 ..      21     105 .. 0.70

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00022
  Syntaxin-6_N 39 ldetrteLrkalrsiewdl...edLeetvriveknpskfkidekelsrrr 85
                  +++t+teL+ + + i++++   ++Le+ +ri+e+  s+++ +e+ +++ +
    EPX74506.1 30 SKQTQTELQVTTELIQEQVksqKELENRIRILEETASRYNTEEQ-VKEWK 78
                  688999999999999999844459*****999996666665443.33333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2318  (0.129288); expected 358.6 (0.02)
Passed bias filter:                      686  (0.038262); expected 358.6 (0.02)
Passed Vit filter:                        70  (0.00390429); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 849.22
//
Query:       EPX74507.1  [L=383]
Description: SWI/SNF and RSC complex subunit Ssr4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.2e-34  119.2   6.4      3e-34  118.8   4.5    2.0  2  SWI-SNF_Ssr4   Fungal domain of unknown function (DUF1750)
  ------ inclusion threshold ------
      0.025   14.6   1.2      0.046   13.8   1.2    1.4  1  BRE1           BRE1 E3 ubiquitin ligase
       0.06   13.2   0.3      0.088   12.6   0.3    1.2  1  USP8_interact  USP8 interacting


Domain annotation for each model (and alignments):
>> SWI-SNF_Ssr4  Fungal domain of unknown function (DUF1750)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.8   4.5     5e-38     3e-34      22     308 ..      28     296 ..      19     329 .. 0.81
   2 ?   -1.3   0.3       0.1   6.1e+02     386     455 ..     302     375 ..     297     377 .. 0.64

  Alignments for each domain:
  == domain 1  score: 118.8 bits;  conditional E-value: 5e-38
  SWI-SNF_Ssr4  22 rypalarlelekvveyLlaApkiardkaPfvWtyLdrPqDgtvlltWQplkrlgtnfasDGyvWadaEqayklevgnGltlEiylqkaGyapg.eqv 117
                    yp  ++l++  vv+ L++A++    +  f+Wt +d+P+Dgt +l+WQ+ +      + DG+    +E ++++ev  G +lEi+  k G+ p  e+ 
    EPX74507.1  28 PYPPAPQLPIPAVVDILTKASQAL-PQITFSWTLVDQPNDGTLFLAWQAPT---LPCPPDGMHFMSNERVFNIEV-TGKVLEIHEAKHGFFPLsEPK 119
                   59********************77.6788********************99...7889*****************.*****************9*** PP

  SWI-SNF_Ssr4 118 alhaRrRyRlvpskvpnpnapqpDpsLwivhYskaepedripanripvdervqkilaqrrfLqsqGqlarKeFmLhD.ranwptiefpr..kqpq.. 209
                   ++h+R RyRl+   ++         + w++hY +a+++d +pan  ++ +      + r++      ++   F+L+  r+  +++++ +  ++ +  
    EPX74507.1 120 TVHSRFRYRLLG--IGFD-------NYWLIHYIHAPENDSVPANI-SIAKPP----QIRQY--PLPDIRTPPFLLREqRTPAANVSVDTpmNEASvs 200
                   ***********7..4533.......58***************984.444433....45777..4568********9724445555554422432233 PP

  SWI-SNF_Ssr4 210 .ayaaqmaprrvPqqmayppqqgqvgppakraarasaaqaaaaaaaeadleledeedvsrgDllDhlTPReiskaRYqqnhewmeEilsSpyaisqi 305
                    a ++ +a  r+P ++  +++   ++pp   +   ++ +++ ++ ++  ++ ed e + +gD++D lTP +i +aR+ +n ewm  il    a + i
    EPX74507.1 201 sATSQLRARSRTPSTANAAAP-SGNVPP--NQVPDPSVKTTIQNGVTPPIAPEDLE-IEKGDIMDKLTPQQICTARFVRNTEWMSQILLTLQAAKDI 293
                   233333333455666555554.334444..44467788888888999999999999.*******************************999999988 PP

  SWI-SNF_Ssr4 306 vpv 308
                    p+
    EPX74507.1 294 EPP 296
                   886 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.1
  SWI-SNF_Ssr4 386 ssllkqaEkeLreavadpsetgseiwrlegrl....deeeeeeseasveakkkvddivaeveaslgrkivavke 455
                   ++ l++  +e++e  a+  ++ +e+ rl+g l    + +e+ ++ +++++ ++ + +v+++++  + kiv+ ++
    EPX74507.1 302 KKSLEEFSNEVKEKKAQLVKQDEEYQRLQGELtytnTISEKLKECSNMDSWEDYQKVVSSLNEFAQAKIVPWER 375
                   56666666777777778888888899999988554222222222233336677788888888888888887665 PP

>> BRE1  BRE1 E3 ubiquitin ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   1.2   7.7e-06     0.046      25      82 ..     276     336 ..     267     348 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 7.7e-06
        BRE1  25 eltileekklrleaekakadqkyfaamrskdalenelkkLnkllsKsselieqLke...le 82 
                 +++ + + +l l+a k+ +    f++++s +   ne+k  +++l K+ e  ++L+      
  EPX74507.1 276 NTEWMSQILLTLQAAKDIEPPTVFDTKKSLEEFSNEVKEKKAQLVKQDEEYQRLQGeltYT 336
                 55668888999999999999**********************************9766433 PP

>> USP8_interact  USP8 interacting
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.3   1.5e-05     0.088       8      85 ..     300     380 ..     296     383 .] 0.83

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.5e-05
  USP8_interact   8 kqqqkiaelkkevaeqkqqlseqkrelellkeyiralrstnpvlral..adql.erdevlrWveslklarvtrWGglistP 85 
                    + +++++e+++ev+e+k ql +q +e + l+  ++ + +++++l++    d+  + ++v+  ++++ +a++  W  ++  P
     EPX74507.1 300 DTKKSLEEFSNEVKEKKAQLVKQDEEYQRLQGELTYTNTISEKLKECsnMDSWeDYQKVVSSLNEFAQAKIVPWERVLHRP 380
                    668899**************************99999999999988743445535589999999999****9998776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (383 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1135  (0.0633053); expected 358.6 (0.02)
Passed bias filter:                      702  (0.0391544); expected 358.6 (0.02)
Passed Vit filter:                        77  (0.00429472); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.41
# Mc/sec: 2807.57
//
Query:       EPX74508.1  [L=681]
Description: anaphase-promoting complex subunit Apc2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-25   89.3   0.4    1.2e-24   86.6   0.1    2.7  2  ANAPC2    Anaphase promoting complex (APC) subunit 2
    8.4e-19   67.6   4.2    1.5e-18   66.8   4.2    1.3  1  Cullin    Cullin family
  ------ inclusion threshold ------
      0.029   14.4   0.2      0.076   13.0   0.2    1.7  1  DUF2400   Protein of unknown function (DUF2400)
       0.05   13.3   0.1       0.12   12.0   0.1    1.6  1  DUF1699   Protein of unknown function (DUF1699)
       0.17   11.7   0.7        1.2    9.0   0.0    2.7  3  OST-HTH   OST-HTH/LOTUS domain


Domain annotation for each model (and alignments):
>> ANAPC2  Anaphase promoting complex (APC) subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       1.6   5.6e+03      17      48 ..     187     216 ..     184     226 .. 0.67
   2 !   86.6   0.1   3.3e-28   1.2e-24       1      60 []     621     680 ..     621     680 .. 0.99

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 1.6
      ANAPC2  17 IhsmLkmfvpkdegyd.isdeeLkefLdelvke 48 
                 I s L+++v  + +++  s   ++  Ld+lv++
  EPX74508.1 187 IRSELTLLV--E-HVSfLSTASVHIQLDQLVSN 216
                 556666777..3.44447777777777777764 PP

  == domain 2  score: 86.6 bits;  conditional E-value: 3.3e-28
      ANAPC2   1 fIvgMLtNlgslpleRIhsmLkmfvpkdegydisdeeLkefLdelvkegkLelsgGkYkL 60 
                 f+vgMLtNlgsl+leRIh+mL+mf+p ++gy+ +++eL+efL  +vke+kLe++gG YkL
  EPX74508.1 621 FVVGMLTNLGSLELERIHNMLTMFIPPPDGYNRTQNELREFLALMVKEDKLEFTGGAYKL 680
                 9*************************9********************************8 PP

>> Cullin  Cullin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.8   4.2   4.1e-22   1.5e-18     397     599 ..     386     574 ..     373     590 .. 0.86

  Alignments for each domain:
  == domain 1  score: 66.8 bits;  conditional E-value: 4.1e-22
      Cullin 397 KDvFekyYkkhLakRLllgksasddaEksmiskLkeecGseftskLegMfkDiklskdlnkefkeyleeekkkkkkvdlsvkVLtagaWpterskesev 495
                 K+   k  +  La RLl+ +  + d+E++ i  Lk   G +  +  + M++Dik sk + +  +e+   ++++     ++++VL+  +Wp+        
  EPX74508.1 386 KETLIKELQLLLAERLLQITDYNYDHEEKNIGFLKYRFGESTLQMCNVMLEDIKKSKYIDSFIHERE--NESD----VFHATVLSRIFWPNLIV----R 474
                 55555556678**********************************************9987777743..3444....69***********5333....4 PP

      Cullin 496 svklpeeledlieeFeefYkskhsgrkLtWlhslgsaelkatfpkkkyelqvstfqmvvLllFndeeeklsyeeiqeatglpekeLkrtLqsLavakka 594
                 s++ p+ +++ ++++ + +++++++r+L +l +lg++el+++ ++++ +++v+  q+  L  F+++  +l +ee +++ g p++ +k+++   +    +
  EPX74508.1 475 SFRTPKAIQEELDKYANSFSKNQNKRELVYLQNLGTVELEIELEDRTLNISVTPEQATLLSFFEES-PTLRLEEAANQLGQPTEIVKKHINFWV---HH 569
                 7**********************************************9****************55.9*********************98876...45 PP

      Cullin 595 rvLlk 599
                 +vL+ 
  EPX74508.1 570 QVLTL 574
                 56654 PP

>> DUF2400  Protein of unknown function (DUF2400)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.2   2.1e-05     0.076       1     121 [.     359     495 ..     359     510 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2.1e-05
     DUF2400   1 DPiqiphrfkekedieiaallaallayGnrkqiikkleellelmdkspydfvleeeeekdlkelekfkyRffnsedllallkalkelleksgsLeeafl 99 
                 DPi  +  f++ +d++i+a l +++   + +++ik+l+ ll+    + +d+  ++e ek   ++  +kyRf   e++l++++++ e ++ks+ +++++ 
  EPX74508.1 359 DPIDAAPDFRKPTDKDIIASLISIFK--SKETLIKELQLLLAERLLQITDYNYDHE-EK---NIGFLKYRFG--ESTLQMCNVMLEDIKKSKYIDSFIH 449
                 9******************9999986..899*********9999889999988888.33...333369**96..5678999999999999999999999 PP

     DUF2400 100 kaeeeeeel.........................eealeafreafle 121
                 +  e+e+++                         +e+l++++++f++
  EPX74508.1 450 ER-ENESDVfhatvlsrifwpnlivrsfrtpkaiQEELDKYANSFSK 495
                 93.44444423333333333333333333332225555555555554 PP

>> DUF1699  Protein of unknown function (DUF1699)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   3.4e-05      0.12      15     100 ..     515     603 ..     511     624 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 3.4e-05
     DUF1699  15 lnenekivHlafrpsntdilslvkkcpklkaiqvpeSy...kktlsksakmfleiqgiellegdvwghrkdineyyevseevierikel 100
                 ++ +++++ ++  p + ++ls ++++p l+  + ++     ++ + k ++ +++ q ++l++ d+++ r+  +e  ++++++ ++  + 
  EPX74508.1 515 IELEDRTLNISVTPEQATLLSFFEESPTLRLEEAANQLgqpTEIVKKHINFWVHHQVLTLVKDDIYRVRETQEEAAVIDTAIEDEPASA 603
                 6678999999*******************9888887652225678999***************************99999988775554 PP

>> OST-HTH  OST-HTH/LOTUS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.0   0.00033       1.2      10      44 ..      33      77 ..      27      78 .. 0.82
   2 ?   -1.4   0.0      0.59   2.1e+03      31      46 ..     159     173 ..     147     174 .. 0.63
   3 ?   -2.9   0.0       1.8   6.4e+03       5      20 ..     301     316 ..     299     328 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00033
                HHHHHHH..........TTTTSBEHHHHHHHHHHHHSST-STCCC CS
     OST-HTH 10 irelLrs..........dpdgwvslsrlgslykkkygksfdprky 44
                +++ Lrs           ++ ++++ +l  l++++y+++f +r+y
  EPX74508.1 33 LIDTLRSnfyssiqtqlFDNRPTTIEELQGLIQNLYSFWFSYRDY 77
                6666677777777778856678*********************99 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.59
                 HHHHHSST-STCCCTS CS
     OST-HTH  31 ykkkygksfdprkyGf 46 
                 +k +   ++ +r+yG+
  EPX74508.1 159 LKDHVQ-TLLYRRYGY 173
                 344444.5559****9 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 1.8
                 HHHHHHHHHHHHTTTT CS
     OST-HTH   5 klkkeirelLrsdpdg 20 
                 k  k ir++L++++d 
  EPX74508.1 301 KALKPIRSFLNERDDT 316
                 6678899999999884 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (681 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       852  (0.0475208); expected 358.6 (0.02)
Passed bias filter:                      590  (0.0329076); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.64u 0.30s 00:00:00.94 Elapsed: 00:00:00.45
# Mc/sec: 4570.88
//
Query:       EPX74509.1  [L=120]
Description: ACN9 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.6e-18   66.5   0.6    3.8e-18   66.0   0.6    1.3  1  Complex1_LYR_2  Complex1_LYR-like
    2.4e-11   43.5   0.0    5.2e-11   42.4   0.0    1.6  1  Complex1_LYR    Complex 1 protein (LYR family)
  ------ inclusion threshold ------
      0.012   16.2   0.3      0.018   15.6   0.3    1.3  1  Complex1_LYR_1  Complex1_LYR-like
       0.12   12.2   0.6       0.26   11.1   0.3    1.9  1  DUF4028         Protein of unknown function (DUF4028)


Domain annotation for each model (and alignments):
>> Complex1_LYR_2  Complex1_LYR-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.0   0.6   8.4e-22   3.8e-18       2      71 ..      17      82 ..      16     111 .. 0.83

  Alignments for each domain:
  == domain 1  score: 66.0 bits;  conditional E-value: 8.4e-22
  Complex1_LYR_2  2 lsLYrrllrelrel.ppelrslgdayvraefrrhkhlknpeeialflknqreYaellerynpglkmteeek 71
                    + LYrrllr +r    p+ r+lgd+yv+aefrrhk+++np + ++fl++++ Yae+le       + +e +
      EPX74509.1 17 IPLYRRLLRVHRVMlGPQERALGDEYVKAEFRRHKNVTNPLHLVGFLTSWQRYAETLEAD-----AWKEQR 82
                    78**********96699*****************************************99.....333333 PP

>> Complex1_LYR  Complex 1 protein (LYR family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.4   0.0   1.1e-14   5.2e-11       4      58 ..      17      71 ..      14      72 .. 0.95

  Alignments for each domain:
  == domain 1  score: 42.4 bits;  conditional E-value: 1.1e-14
  Complex1_LYR  4 LsLYRalLRearkfpdyntreyfrrriRdeFrknkhvtDpekieellkkgreeLe 58
                  + LYR+lLR  r   ++++r+   +++++eFr++k+vt+p  +  +l++++++ e
    EPX74509.1 17 IPLYRRLLRVHRVMLGPQERALGDEYVKAEFRRHKNVTNPLHLVGFLTSWQRYAE 71
                  56*************************************************9976 PP

>> Complex1_LYR_1  Complex1_LYR-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.6   0.3     4e-06     0.018       5      65 ..      18      70 ..      15      93 .. 0.74

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 4e-06
  Complex1_LYR_1  5 rlyrallkaarrfPlrsrreivaeevraafrhplndslttkevdykl.llgweraaaiqtya 65
                     lyr ll+  r + + + r +  e v+a+fr       ++k+v++ l l+g+   ++ q ya
      EPX74509.1 18 PLYRRLLRVHRVMLGPQERALGDEYVKAEFR-------RHKNVTNPLhLVGF--LTSWQRYA 70
                    59*****************************.......55555554412232..22334444 PP

>> DUF4028  Protein of unknown function (DUF4028)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.3   5.9e-05      0.26      21      36 ..      38      53 ..      29      91 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 5.9e-05
     DUF4028 21 nGdqyvkkwfrkhenn 36
                 Gd+yvk  fr+h+n 
  EPX74509.1 38 LGDEYVKAEFRRHKNV 53
                59***********995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       603  (0.0336327); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.36u 0.27s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 921.45
//
Query:       EPX74510.1  [L=118]
Description: V-ATPase assembly factor Pkr1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-24   85.4   8.9    2.6e-24   85.2   8.9    1.1  1  Pkr1        ER protein Pkr1
  ------ inclusion threshold ------
      0.021   15.2   0.0      0.038   14.3   0.0    1.4  1  Phage_Gp23  Protein gp23 (Bacteriophage A118)
      0.033   13.9   0.3      0.041   13.5   0.3    1.2  1  DUF4131     Domain of unknown function (DUF4131)
      0.054   11.9   0.0      0.054   11.9   0.0    1.0  1  CBP_BcsG    Cellulose biosynthesis protein BcsG
      0.063   11.9   0.1      0.073   11.6   0.1    1.1  1  GP120       Envelope glycoprotein GP120
        3.1    7.6   7.0        3.1    7.6   6.3    1.4  1  PAP2        PAP2 superfamily
        8.3    6.3  10.3        0.9    9.4   5.5    1.7  2  DUF2721     Protein of unknown function (DUF2721)


Domain annotation for each model (and alignments):
>> Pkr1  ER protein Pkr1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.2   8.9     1e-27   2.6e-24       1      72 [.       2      73 ..       2      74 .. 0.97

  Alignments for each domain:
  == domain 1  score: 85.2 bits;  conditional E-value: 1e-27
        Pkr1  1 asffeelwesIftpgvtptlliatnvsFaaLllvllaLlvatsniHfivLlllalgLwasinWFvaeLkkak 72
                as+f+elw+sIf pgvtp l +  ++++a+L ++++aL++ t+++H+i+Llll+l+Lw+s++WF+ eL++++
  EPX74510.1  2 ASYFQELWQSIFVPGVTPVLAKSAHAACAVLAVLFIALYISTKSVHCIILLLLTLCLWLSLTWFLVELAHSR 73
                589*****************************************************************9975 PP

>> Phage_Gp23  Protein gp23 (Bacteriophage A118)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   1.5e-05     0.038      16      83 ..      33     105 ..      15     113 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.5e-05
  Phage_Gp23  16 evlfaalsv....vlflillivtkriwddrkilkiemkeerekkeekrekkek.eskeekdktissvdkskrl 83 
                  vlf al++    v  +ill++t  +w       +e+   r + +   e+  + e ++ k  t+ss+d+ ++l
  EPX74510.1  33 AVLFIALYIstksVHCIILLLLTLCLWLSLTWFLVELAHSRVQGNTTSERPPRnEKEQTKRPTTSSLDQIQNL 105
                 456666666333234589*********************9998887777665515566677899****99988 PP

>> DUF4131  Domain of unknown function (DUF4131)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.3   1.6e-05     0.041      10      59 ..      28      74 ..      21      95 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.6e-05
     DUF4131 10 lalllllllllllllrrrprrrvllllllllllallgfalrapqpnandl 59
                 +++l++l+++l++    ++    ++llll l+++l +++   + ++++ 
  EPX74510.1 28 ACAVLAVLFIALYI---STKSVHCIILLLLTLCLWLSLTWFLVELAHSRV 74
                57778888888888...799999999999999999999998888777665 PP

>> CBP_BcsG  Cellulose biosynthesis protein BcsG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   2.1e-05     0.054      96     182 ..      29     114 ..       2     118 .] 0.73

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 2.1e-05
    CBP_BcsG  96 llalivllivylllsqwirvttlvllal.ialsvleksaksaaaaaaakaaeaeaakaaaaaaqaaeansanldealeaFyekekkrk 182
                 +++l+vl+i+ ++  + +   +l ll+l ++ls++     ++ a+++ + ++++++   ++++q++++++++ld++ +  +++e +r 
  EPX74510.1  29 CAVLAVLFIALYISTKSVHCIILLLLTLcLWLSLTW--FLVELAHSRVQGNTTSERPPRNEKEQTKRPTTSSLDQIQNLSLREEPSRA 114
                 567788999999999999988888877724666655..34555555555566667777788888899999999999988888887775 PP

>> GP120  Envelope glycoprotein GP120
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   2.9e-05     0.073      79     124 ..      60     106 ..      43     114 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2.9e-05
                 EEEEEBSSSEEEEEXTTXXEE..............EEEETTTTEEEE CS
       GP120  79 vkltplcvalkcsdlkndtttpn.prtsssttsrpnssaariineks 124
                 + lt + v l  s+++++tt+   pr     t rp++s+   i++ s
  EPX74510.1  60 LSLTWFLVELAHSRVQGNTTSERpPRNEKEQTKRPTTSSLDQIQNLS 106
                 5689999************99763699999********988887655 PP

>> PAP2  PAP2 superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   6.3    0.0012       3.1      58     104 ..      24      64 ..      13      77 .. 0.81

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0012
        PAP2  58 SgHsafafalalllalllrrkrkkiglvllalillllavlvalsRly 104
                 S H+a a++++l++al++ +k         + illll+++ +ls  +
  EPX74510.1  24 SAHAACAVLAVLFIALYISTKSVH------CIILLLLTLCLWLSLTW 64 
                 99**********************......55555556666655544 PP

>> DUF2721  Protein of unknown function (DUF2721)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   5.5   0.00035       0.9      73     123 ..      24      72 ..      19      77 .. 0.83
   2 ?   -1.3   0.1      0.73   1.9e+03      40      59 ..      89     108 ..      82     114 .. 0.68

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00035
     DUF2721  73 sallvvlvvlllflsallsldlsllaailfvlalllllvslllflrEirls 123
                 sa ++++v ++lf+  +l ++++++  i+ +l  l+l +sl+ fl+E+  s
  EPX74510.1  24 SAHAACAVLAVLFI--ALYISTKSVHCIILLLLTLCLWLSLTWFLVELAHS 72 
                 66677777777777..55679999999999999**************9988 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.73
     DUF2721  40 aeeeeedeelakeiknlrrR 59 
                 +++++++++   +i+nl+ R
  EPX74510.1  89 EQTKRPTTSSLDQIQNLSLR 108
                 33334466778889998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1021  (0.0569468); expected 358.6 (0.02)
Passed bias filter:                      499  (0.027832); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.46u 0.28s 00:00:00.74 Elapsed: 00:00:00.45
# Mc/sec: 785.77
//
Query:       EPX74511.1  [L=879]
Description: mediator complex subunit Pmc1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-55  186.9   1.3    3.9e-55  186.2   0.7    1.7  2  Med14     Mediator complex subunit MED14


Domain annotation for each model (and alignments):
>> Med14  Mediator complex subunit MED14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  186.2   0.7   2.2e-59   3.9e-55       1     190 [.      13     204 ..      13     205 .. 0.96
   2 ?   -4.1   0.0      0.49   8.9e+03     139     157 ..     236     254 ..     226     258 .. 0.72

  Alignments for each domain:
  == domain 1  score: 186.2 bits;  conditional E-value: 2.2e-59
                 EEEHHHHHHHHHHHHHHHHHHHHHHCT-TS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGHHHCCHHHHHHHHHHHHHHCCCCCHCCCCCHHHHHHC CS
       Med14   1 lvpLselverlvqasykeLselaetlptsesdlerkrellkfaqktrqqfvKllvlvkWsrkaekvsklidllaflrqqneafedaadalkelkeslan 99 
                 ++pL ++ve + +++ +eL +lae lp s+s++++kr++l+++ + r   +Kll+l++W + ++ v+++id++afl+ q+++++++++ l+ ++ +++ 
  EPX74511.1  13 FYPLFNIVETYSRHVLNELVSLAEILP-SMSNVDKKRSILDWLLRSRTYTIKLLILARWMHFSPLVHRCIDVVAFLQGQKFCYQNLVHVLQTIRYQMSF 110
                 57999**********************.*********************************************************************** PP

                 CHHHHHHHHCHHCHCTTCHCHCC...CCCCSCSH..--S---SHHHHHHHHHHHHHHHHHHHHBS---CCGSSEECCTCEEEESSSBECCC-EECE CS
       Med14 100 aklpnpdlktAleVLstGrysrl...pslikeey..ppkpltakeilktlkdlnelirlrLalhekiPkefknyeikdGrvtftvpgeFevdLtla 190
                 a+l+n dl tAl++LstG+  rl   ps  +  y  p +++++k++l+ l+ +n+++r+rL lhe iP++f+++ i++Gr+tftvp+eF+v++t+ 
  EPX74511.1 111 ARLRNADLLTALDLLSTGTNVRLlnaPSSRT--YvlPRNEISTKQVLQALRTINMILRIRLDLHEVIPSPFRKFVINNGRCTFTVPNEFSVSMTTN 204
                 **********************955455443..345*********************************************************985 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 0.49
                 HHHHHHHHHHHHHHHHHHH CS
       Med14 139 eilktlkdlnelirlrLal 157
                  ++ + + +ne i lrLa 
  EPX74511.1 236 FKQLVEHHVNEQIALRLAE 254
                 4556778899999999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (879 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       441  (0.024597); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.28s 00:00:00.97 Elapsed: 00:00:00.47
# Mc/sec: 5604.46
//
Query:       EPX74512.1  [L=680]
Description: pseudouridine synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.3e-70  235.5   0.0    2.1e-67  227.7   0.0    2.3  2  TruD      tRNA pseudouridine synthase D (TruD)


Domain annotation for each model (and alignments):
>> TruD  tRNA pseudouridine synthase D (TruD)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.6   0.0   0.00033       5.9       9      33 ..      60      83 ..      51     113 .. 0.77
   2 !  227.7   0.0   1.2e-71   2.1e-67      39     415 ..     236     657 ..     209     658 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.00033
        TruD  9 tdtegigGrlrespeDFiVeEieef 33
                +  + i+G l+++  DF+V+E+  +
  EPX74512.1 60 SGLPAIDGILKARFTDFMVHEVD-V 83
                45789****************93.3 PP

  == domain 2  score: 227.7 bits;  conditional E-value: 1.2e-71
        TruD  39 adegeylvlrvekrnwdtldlvrelaralgisrkrvgfaGtKDkrAvTtQlisirkvepeeleal.......eikdvelevvgrarrklrlGdLaGNkF 130
                 a  gey+++++ k+n+d++d + ++ar l+i  k +++aGtKD+r++T Q  ++r+v++++l++l       +  +  l +    + +l+lGdL+GN+F
  EPX74512.1 236 ALGGEYCYFHLYKENRDSMDCLGKIARLLKIPTKLLSIAGTKDRRGITCQRAAVRHVRASRLAQLnagslsnSTYGFLLGNYSYGNSPLKLGDLQGNEF 334
                 456***********************************************************9998887766567888999999*************** PP

        TruD 131 eirvrdvaeeeeaakraeeileeleekggvPNyfGvQRFGsrrpvthlvGkaivkgdleeAvelyvgkpfeeesedtreareavaetgdleealeelpk 229
                 ++++rdv+ ++e  +++e ++++++e+g + NyfG+QRFG+    th++G a+++ d+++Avel +  p +e++  +rea ++   t+d ++ l+ lp+
  EPX74512.1 335 QVVLRDVS-TPE--DKIELCMSSIKEHG-FINYFGLQRFGTSSVGTHTIGIALLQSDWKKAVEL-ILSPRPEHTGPVREAMNIWHTTHDPDATLKILPR 428
                 ******84.444..69**********98.*********************************86.557889999999********************** PP

        TruD 230 slryErallkrLae..kpkdykkAlealpknLqrlFvhAyqSylFNrvlseRlerglpldepveGDvvifaeer.......lpdtdrlqlvte..knve 317
                 +l  E ++l+   +  +++d+ +A++++p++L++++ hAyqSy++N+v+s R+++    d+pv+GD+v+++            d+++ ++v++  ++ +
  EPX74512.1 429 RLIAETSILETWLRsgNQNDFLGAFQRIPRHLRSIYPHAYQSYVWNKVVSWRIKQL--GDKPVAGDLVLESPTGnqsndniPVDPEAPDVVEDipQTSK 525
                 **********998879999***********************************88..58********9986667788887445555566665335667 PP

        TruD 318 evkrliergra......fvtaplvGtetelaegevgeierevleeegleledFklpklpelsskGtrRaillrve........................ 386
                  ++r++++++        +++pl+G +   ++ ++ +  +++++e+ l++ + + ++  els  G++R++++r++                        
  EPX74512.1 526 PIARHLKEEELgnytiyDIVLPLPGRNILYPNNSTFDAYKRIMSEHSLDPCQMARKD-RELSLPGDYRKLVVRPKgmewytikydsleqqitttdkdvl 623
                 788888887742222226899*********************************777.8************************************9999 PP

        TruD 387 ....dlelsaeede.....ltleFsLpkGsYATvvlrE 415
                           ++d+     l+l+F+Lp+ sYAT+ lrE
  EPX74512.1 624 enkaP----VTTDDgkyraLVLKFQLPSSSYATMALRE 657
                 66441....33322345569*****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (680 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       570  (0.0317921); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.30s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 4696.88
//
Query:       EPX74513.1  [L=124]
Description: hypothetical protein SOCG_01996 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00057   20.0   0.7       0.14   12.2   0.1    2.3  2  DUF148     Domain of unknown function DUF148
  ------ inclusion threshold ------
      0.013   15.8   0.7      0.046   14.0   0.0    2.0  2  BLOC1_2    Biogenesis of lysosome-related organelles complex-
      0.014   15.5   0.3        2.6    8.2   0.1    2.3  2  YojJ       Bacterial membrane-spanning protein N-terminus
      0.026   14.5   0.0      0.032   14.2   0.0    1.1  1  HbrB       HbrB-like
      0.043   13.8   0.6        1.2    9.1   0.2    2.3  2  L27_1      L27_1
      0.052   13.8   0.0        0.1   12.9   0.0    1.5  1  BRICHOS    BRICHOS domain
       0.19   11.8   1.9       0.41   10.8   1.9    1.6  1  DASH_Dad3  DASH complex subunit Dad3


Domain annotation for each model (and alignments):
>> DUF148  Domain of unknown function DUF148
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.1   5.6e-05      0.14      32      76 ..      39      83 ..      17      90 .. 0.87
   2 !    6.3   0.1    0.0039        10       2      23 ..     102     123 ..     100     124 .] 0.75

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 5.6e-05
      DUF148 32 gvtdeykefeakvkaqkeevkknvtavisnLssvqekleaIldnk 76
                + ++ +++f+++++++ + ++++++++  nL+   ++++a  +++
  EPX74513.1 39 SSQQLLNQFQSTLNNNLSVLNNQIQQICGNLPRLPTMVSALDHDS 83
                568889**************************9999999987776 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0039
      DUF148   2 arkeffaIlknenltiaeieeq 23 
                 a +e  +I kn  ltiaei++q
  EPX74513.1 102 ALQELEEIRKNLGLTIAEIDKQ 123
                 6677888888888888888877 PP

>> BLOC1_2  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   1.8e-05     0.046      47      91 ..      41      86 ..      19      90 .. 0.77
   2 ?    0.1   0.1      0.39   9.9e+02      53      78 ..     103     114 ..      96     124 .] 0.35

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1.8e-05
     BLOC1_2 47 ekkleklne.kyeelqpylqqidqiekqvteLeeavseLDeyskeL 91
                ++ l++ ++ ++++l+ + +qi+qi  ++ +L ++vs+LD+ s+ L
  EPX74513.1 41 QQLLNQFQStLNNNLSVLNNQIQQICGNLPRLPTMVSALDHDSRLL 86
                33344443313469**************************988877 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.39
     BLOC1_2  53 lnekyeelqpylqqidqiekqvteLe 78 
                 l+e              +e+  + L 
  EPX74513.1 103 LQE--------------LEEIRKNLG 114
                 222..............222222222 PP

>> YojJ  Bacterial membrane-spanning protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0    0.0076        20       3      32 ..      40      69 ..      38      83 .. 0.86
   2 ?    8.2   0.1     0.001       2.6       3      35 ..      88     123 ..      86     123 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0076
        YojJ  3 ekcleeelkeklkeeLeqiekeleevlkal 32
                +++l ++++++l ++L+   ++++++  +l
  EPX74513.1 40 SQQLLNQFQSTLNNNLSVLNNQIQQICGNL 69
                577889999999999999999999998766 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.001
        YojJ   3 ekcleeelkek...lkeeLeqiekeleevlkaldee 35 
                 ++c++ ++ke+     +eLe+i+k+l   ++++d++
  EPX74513.1  88 QTCDSFPFKEDslnALQELEEIRKNLGLTIAEIDKQ 123
                 78999999998322458999***********99986 PP

>> HbrB  HbrB-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   1.2e-05     0.032      23      73 ..      16      80 ..       8      95 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 1.2e-05
        HbrB 23 lrvpiEdlnklvelhiqlvierakalsllvedleeLlstglltLenkLsq...............l 73
                   piE+ln ++ +  + +  + ++ ++l++ +++ l++ l++L+n+++q                
  EPX74513.1 16 FTNPIEKLNAILPKQGTPQQLA-TSSQQLLNQFQSTLNNNLSVLNNQIQQicgnlprlptmvsalD 80
                5679********9876665555.799************************7666666555555544 PP

>> L27_1  L27_1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.2   0.00048       1.2      25      47 ..      32      54 ..      17      65 .. 0.84
   2 ?    3.1   0.0     0.037        95       4      21 ..      96     113 ..      94     124 .] 0.83

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00048
       L27_1 25 edeeLrqalerviniFksqLfqA 47
                + ++L ++ ++++n F+s+L + 
  EPX74513.1 32 TPQQLATSSQQLLNQFQSTLNNN 54
                5689***************9765 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.037
       L27_1   4 kkDaerALelLeeyrakL 21 
                 k+D   AL+ Lee r++L
  EPX74513.1  96 KEDSLNALQELEEIRKNL 113
                 678889*******99988 PP

>> BRICHOS  BRICHOS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   3.9e-05       0.1      41      88 ..      22      70 ..       6      71 .. 0.58

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 3.9e-05
     BRICHOS 41 ellrlleekkeeeeets..eslgvyvvkeepvkdlsqlgkkiqelCkglp 88
                +l+  l ++  +++ ++  ++l     +++  ++ls l+++iq++C++lp
  EPX74513.1 22 KLNAILPKQGTPQQLATssQQL-LNQFQSTLNNNLSVLNNQIQQICGNLP 70
                3333333322233322222222.3444555555***************98 PP

>> DASH_Dad3  DASH complex subunit Dad3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   1.9   0.00016      0.41       4      45 ..      39     107 ..      36     117 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00016
   DASH_Dad3   4 leqevLdeYe.rLaenlktLaselkeLasn..........................steeildgLReLE 45 
                   q++L++++ +L++nl  L+++++++  n                           +e+ l+ L+eLE
  EPX74513.1  39 SSQQLLNQFQsTLNNNLSVLNNQIQQICGNlprlptmvsaldhdsrllsqtcdsfpFKEDSLNALQELE 107
                 57999***98459**************999999999999999999999999999964777777777777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1247  (0.0695521); expected 358.6 (0.02)
Passed bias filter:                      786  (0.0438396); expected 358.6 (0.02)
Passed Vit filter:                        77  (0.00429472); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.42u 0.27s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 908.65
//
Query:       EPX74514.1  [L=528]
Description: chaperonin-containing T-complex gamma subunit Cct3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   2.7e-165  550.7   0.3   3.1e-165  550.5   0.3    1.0  1  Cpn60_TCP1  TCP-1/cpn60 chaperonin family


Domain annotation for each model (and alignments):
>> Cpn60_TCP1  TCP-1/cpn60 chaperonin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  550.5   0.3  1.7e-169  3.1e-165       1     488 [.      31     521 ..      31     524 .. 0.99

  Alignments for each domain:
  == domain 1  score: 550.5 bits;  conditional E-value: 1.7e-169
                 HHHHHHCCSSTTXXEEEEEETTSEEEEEXSHHHHHHCSXXXSHHHHHHHHHHHHCCCCCTTCHHHHHHHHHHHHHHHHHHHHCTXXHHHHHHHHHHHHH CS
  Cpn60_TCP1   1 ladivkttlGPkGmdKmlvnkggkvvvTnDGatilkeleiehPaakllveaaesqdeevGDGTttvviLageLleeaekliaagvhpttiiegyekale 99 
                 +ad+++t+lGP+ m+Kml +++g+v +TnDG++il+e+e+ hPaak+++e+a++qdeevGDGTt+v+iLage+l +a+ l+++++hp++ i+ +++ale
  EPX74514.1  31 VADVIRTCLGPRAMLKMLLDPIGSVLLTNDGHAILREIEVAHPAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLERKIHPVVMIRSFKQALE 129
                 689************************************************************************************************ PP

                 HHHHHHHHHXEEBXSCSTT.HHHHHHHHHHCTTSSXXSTHHHHHHHHHHHH.HCHCCCS..EECSCCC.EECCCCEECECTTSEEESEEEESS--SSTT CS
  Cpn60_TCP1 100 kaleaLkeiaveisseekdreeLlkvartslsskltskeaeelsklvvdAv.klieene..keldlgr.ikvvkieggsledselveGlvldkgvlspd 194
                 +al+ +++i  +++++ +d+ e+ +++rt++++kl++++++ +++l+++Av +++ +++   e+d++r  +v+ki gg++e+s +++G++l+k++++p+
  EPX74514.1 130 DALKVIDKI--TLPVNVDDNVEMFRLIRTCIGTKLVARWSDLMCHLALRAVrTVVSTANgrMEIDIKRyARVEKIPGGEIESSCVLDGVMLNKDITHPK 226
                 *********..88888889********************************777777669999*****9****************************** PP

                 SSCEEECEEEEEESS-BS--HHCCHHHCCCCSCCHHHHHHHHHHHHHHHHHHHHHHTTECEEEESS-B-HHHHHHHHHCT-EEE-S--HHHHHHHHHHH CS
  Cpn60_TCP1 195 mpkklenakvllldvsLeiektetkttvvlsdaeeleklekaeekqleellekiiksgvnvvvcqkgiddlalhflakngilalrrvkkkdlerlakat 293
                 m +++en++v+lld++Le+ k e++t++++++++++ ++++ ee+q++++++ +i+ + ++v+++kgi+dla+h+l k++i a+rr++k+d +r+a+at
  EPX74514.1 227 MRRRIENPRVVLLDCPLEYRKGESQTNIEITKESDWSRVLEIEEEQIKHMCDCVIAVKPDLVITEKGISDLAQHYLLKANITAIRRTRKSDNNRIARAT 325
                 *************************************************************************************************** PP

                 T--EBSCGGGGGCGC-EEEEEE.EECCETTCCEEEEECESSSSXEEEEEEESTCCCHHHHHHHHHHHHHHHHHHHHHHEEEETTTCHHHHHHHHHHCCC CS
  Cpn60_TCP1 294 GatavssledltpeelGtakkv.eeekigsekttiieevksgkiatillrgatdtvldeieraiedAlnvvknaiedekvvpGGGatelelakklkeya 391
                 Gat+v+++edl ++++Gt + + +++k+g+e++t+++++k++k++ti+lrg+++++++e+er+++dA+ v++n++ ++k+ pGGGate++++  l+e++
  EPX74514.1 326 GATIVNRVEDLREKDVGTGCGLfYVDKLGDEYFTFLTGCKNPKACTIVLRGPSKDIINEVERNLQDAMAVARNVFFHPKLAPGGGATEMAVSVCLAEKS 424
                 ******************99999**************************************************************************** PP

                 CTSXCCHHHHHHHHHHHHTHHHHHHHHHCTSXHHHHHHHHHHHHHTTXTTEEEETTTTCEEECCCCTXEEEHHHHHHHHHHHHHHHHHHHCEEEEEX CS
  Cpn60_TCP1 392 ksvsgeeqlaieafakALevipktLaeNaGldpievlaklraahnkgekelgidvesgeiidlveagvvDplkvkrqalksAteaastiLrideiik 488
                 + +++  q+ ++a+a+A+e+ip+tL +N+G++pi+ l++lra+h++g+ ++gid e+g+++d++e gv++p +vk q++k+A e+a+++Lr+d+i++
  EPX74514.1 425 RAIEDVAQWPYRAIADAIEIIPRTLVQNCGANPIKSLTELRAKHAEGHYSFGIDGETGRVVDMHEYGVWEPEAVKLQSIKTAIESACLLLRVDDIVS 521
                 ***********************************************************************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (528 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       585  (0.0326287); expected 358.6 (0.02)
Passed bias filter:                      518  (0.0288917); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.27s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 3623.94
//
Query:       EPX74515.1  [L=436]
Description: U3 snoRNP-associated protein Sof1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.4e-31  106.1  14.9    1.4e-30  105.4  14.9    1.4  1  Sof1         Sof1-like domain
    1.8e-28   98.2  11.6    7.7e-08   32.9   0.0    6.8  7  WD40         WD domain, G-beta repeat
    3.6e-10   40.0   0.2    0.00027   21.1   0.0    4.2  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    2.6e-06   27.4   0.1     0.0031   17.4   0.0    2.3  2  eIF2A        Eukaryotic translation initiation factor eIF2A


Domain annotation for each model (and alignments):
>> Sof1  Sof1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.4  14.9   3.2e-34   1.4e-30       1      87 []     345     431 ..     345     431 .. 0.99

  Alignments for each domain:
  == domain 1  score: 105.4 bits;  conditional E-value: 3.2e-34
        Sof1   1 AkAseklgvlsaReraaleyreaLkekykhmpeikrIarhRhvPkaikkakkekremkeaekrKeenrrkhskkgsvprkserkkkv 87 
                 AkAs++  + s+Re+++l+y +aL+++ykh+pei+rIarhRhvP ++kka ++kre++++ kr+eenrr+hskkg+vp+++er+k+v
  EPX74515.1 345 AKASSRASIRSTREENRLKYLDALRDRYKHIPEIRRIARHRHVPSVVKKAGEIKREEIASLKRREENRRRHSKKGAVPYEKEREKHV 431
                 89***********************************************************************************97 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.2   9.4e-06     0.042       8      38 .]      61      93 ..      56      93 .. 0.76
   2 !   17.5   0.0   1.2e-06    0.0054       6      38 .]     102     134 ..      97     134 .. 0.86
   3 ?   -1.7   0.1       1.4   6.3e+03      18      38 .]     155     173 ..     143     173 .. 0.65
   4 ?    4.1   0.4     0.021        96      14      38 .]     200     216 ..     155     216 .. 0.82
   5 !    5.3   0.0     0.009        40      14      37 ..     233     257 ..     222     258 .. 0.83
   6 !   32.9   0.0   1.7e-11   7.7e-08       3      38 .]     265     301 ..     263     301 .. 0.95
   7 !   25.5   0.0   3.8e-09   1.7e-05      12      37 ..     312     343 ..     303     344 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 9.4e-06
                ESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40  8 tGH.ssvtslafspdgaw.lasGsdDgtvriWd 38
                 GH ++v+sla + ++    +sGs Dg v++W+
  EPX74515.1 61 QGHqDGVYSLARDTNSLIdCSSGSGDGVVKLWN 93
                59*777****555555555568988*******8 PP

  == domain 2  score: 17.5 bits;  conditional E-value: 1.2e-06
                 EEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   6 tltGHss.vtslafspdgawlasGsdDgtvriWd 38 
                 + ++H++ v++l fs +g+ l+++s D+ v ++d
  EPX74515.1 102 STKAHDGiVRGLVFSNNGDILSCAS-DRYVNLYD 134
                 6689*5558************9889.*****998 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 1.4
                 EETTSSEEEEEETTSEEEEEE CS
        WD40  18 fspdgawlasGsdDgtvriWd 38 
                 +++ g+ +a+ s   +v iWd
  EPX74515.1 155 TCKKGHTFAT-S-GANVSIWD 173
                 5555566553.5.56777887 PP

  == domain 4  score: 4.1 bits;  conditional E-value: 0.021
                 EEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  14 tslafspdgawlasGsdDgtvriWd 38 
                 ts+        las++ D+++ i+d
  EPX74515.1 200 TSV--------LASAGIDRSIVIYD 216
                 455........9999********98 PP

  == domain 5  score: 5.3 bits;  conditional E-value: 0.009
                 EEEEEETTSSE.EEEEETTSEEEEE CS
        WD40  14 tslafspdgaw.lasGsdDgtvriW 37 
                 +s++++p  ++ +++Gs+D++v++ 
  EPX74515.1 233 NSISWNPIEPFnFIAGSEDHNVYLH 257
                 578788888889778*******986 PP

  == domain 6  score: 32.9 bits;  conditional E-value: 1.7e-11
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  l++++ H s vts++fsp g+ ++sGs+D+t+r+++
  EPX74515.1 265 ALHVYKDHvSAVTSVDFSPTGQEFVSGSYDKTIRLYN 301
                 589*****999************************97 PP

  == domain 7  score: 25.5 bits;  conditional E-value: 3.8e-09
                 S......EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  12 s......vtslafspdgawlasGsdDgtvriW 37 
                 +      vts++fs d+++++sGsdD +vr+W
  EPX74515.1 312 HtkrmqrVTSVRFSMDSQYVFSGSDDSNVRLW 343
                 0455777************************* PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.1   6.9e-05      0.31      32      76 ..      94     144 ..      84     188 .. 0.81
   2 ?    2.0   0.0     0.057   2.6e+02      50      89 ..     200     237 ..     170     240 .. 0.78
   3 !   21.1   0.0   6.1e-08   0.00027      13      91 ..     248     326 ..     235     327 .. 0.91
   4 !    5.4   0.0    0.0052        23      36      70 ..     314     348 ..     309     365 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 6.9e-05
  ANAPC4_WD40  32 l.......eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhsl 76 
                  +       +++++d+ vr+L ++++g +L  a sd  v+l+d ++g v +s+
   EPX74515.1  94 AgereerwSTKAHDGIVRGLVFSNNGDILSCA-SDRYVNLYDKQDGSVKKSF 144
                  445555555699*****************876.899**********998776 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.057
  ANAPC4_WD40  50 gklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                   ++La a  d ++ ++d  +   + +l +k     ++++W
   EPX74515.1 200 TSVLASAGIDRSIVIYDLRTSSPLTKLVTKLR--TNSISW 237
                  479999999999****9999999998876655..677777 PP

  == domain 3  score: 21.1 bits;  conditional E-value: 6.1e-08
  ANAPC4_WD40  13 atedgellvfRl.ngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWge 91 
                  ++ed +++++ + n++r  ++  +++ s v+s+ ++p g+ ++ +  d ++rl++a +g+    +++k+ ++vt++ +++
   EPX74515.1 248 GSEDHNVYLHDMrNMKRALHV-YKDHVSAVTSVDFSPTGQEFVSGSYDKTIRLYNAREGHSRDIYHTKRMQRVTSVRFSM 326
                  578999999987799999999.789999***********************************************99986 PP

  == domain 4  score: 5.4 bits;  conditional E-value: 0.0052
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesg 70 
                  k+ ++v+s+++++d +    + +d++vrl  a+  
   EPX74515.1 314 KRMQRVTSVRFSMDSQYVFSGSDDSNVRLWRAKAS 348
                  67799************************988765 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   6.9e-07    0.0031      47     163 ..     165     293 ..     154     304 .. 0.68
   2 !   16.0   0.0   1.9e-06    0.0084      55     160 ..     225     333 ..     214     349 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 6.9e-07
                 TT--EEECCEESSS.EEEEEE........-TTSS-EEEEES.SSSCEEEEEECS.CEEEEEE.EEES--EEEE-TTSSEEEEE-TTSSS-EE.EEEETT CS
       eIF2A  47 kkkksevvelkkegpihdvaW........spkskefaviyG.kmpakvslfdlk.vkviskl.eeqkrNtiffspkgklvllaGfgnlaGel.eiwdvk 133
                 ++ ++++ +++++ p+  ++W        + +  e  v+    ++++++++dl+  ++++kl  + + N+i ++p + +  +aG  + +  l ++ ++k
  EPX74515.1 165 SGANVSIWDINRDTPVSKFEWgvdtlpvvKFNYAETSVLASaGIDRSIVIYDLRtSSPLTKLvTKLRTNSISWNPIEPFNFIAGSEDHNVYLhDMRNMK 263
                 5556666666666666666662222222212334444544436899*******865566665156688*******************965552345555 PP

                 TTEEEEEEE-TT--EEEE-TTSSEEEEEE- CS
       eIF2A 134 kkkkiakaeaanatlvewspdgryvlTatt 163
                 +  ++ k + +  t+v++sp+g+ ++  + 
  EPX74515.1 264 RALHVYKDHVSAVTSVDFSPTGQEFVSGSY 293
                 555677888889999********9987665 PP

  == domain 2  score: 16.0 bits;  conditional E-value: 1.9e-06
                 CEESSS.EEEEEE-TTSS-EEEEESSSSCEEEEEECS....CEEEEEEEEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETT...TTEEEEEEE-TT- CS
       eIF2A  55 elkkegpihdvaWspkskefaviyGkmpakvslfdlk....vkviskleeqkrNtiffspkgklvllaGfgnlaGeleiwdvk...kkkkiakaeaana 146
                 +l ++     ++W+p +  f  i G  + +v+l+d++    +  ++k + ++  ++ fsp+g+ ++ + +  +   + +++     +++ +++ + +  
  EPX74515.1 225 KLVTKLRTNSISWNPIE-PFNFIAGSEDHNVYLHDMRnmkrALHVYKDHVSAVTSVDFSPTGQEFVSGSYDKT---IRLYNAReghSRDIYHTKRMQRV 319
                 45555566789999985.7999*************9664333444444445667788**********999998...99999887767778888889999 PP

                 -EEEE-TTSSEEEE CS
       eIF2A 147 tlvewspdgryvlT 160
                 t+v +s d++yv  
  EPX74515.1 320 TSVRFSMDSQYVFS 333
                 99********9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (436 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       510  (0.0284455); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3039.97
//
Query:       EPX74516.1  [L=384]
Description: matrix protein import protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   6.1e-102  341.4   1.3   7.2e-102  341.1   1.3    1.0  1  Tam41_Mmp37  Phosphatidate cytidylyltransferase, mitochondria


Domain annotation for each model (and alignments):
>> Tam41_Mmp37  Phosphatidate cytidylyltransferase, mitochondrial
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  341.1   1.3    4e-106  7.2e-102       1     323 []      56     378 ..      56     378 .. 0.90

  Alignments for each domain:
  == domain 1  score: 341.1 bits;  conditional E-value: 4e-106
  Tam41_Mmp37   1 lekilkkfpapiryafaYGSgvfkqkgykkkkkkkkmiDlifavsdpeewHslNlkqnpsHYsllrrlgskliskvqeklgagvyfnplvevngkliK 98 
                  l+++lk+f+api++a++YGSgvf+q+gy  ++++k+m+D+if+v+dp +wH+lN++qnpsHYs+l+++g+k+++kvqe++ga++y+n+ v+v +++iK
   EPX74516.1  56 LKDLLKTFNAPIQVAIGYGSGVFQQAGY--QSSAKPMVDFIFQVNDPVRWHELNIQQNPSHYSALKYFGPKAVTKVQEDYGANIYYNTQVRVGNSIIK 151
                  6899************************..9******************************************************************* PP

  Tam41_Mmp37  99 YGVvsledllkDLleWdtLYlaGRlqKPvkilrddarirlanqvNlksAlraaLlllpekfteeeLyetiasLSYlGDlRmklggEnknKvkniVekq 196
                  YGV++ e+l++DL +W+tLY aGR+qKPv++++ ++ +  +n++Nl++A++aaL++lp+kf+e e+y+ti++LSY GD+Rm+l +En++Kv+niV+kq
   EPX74516.1 152 YGVIKRESLMDDLKNWNTLYTAGRCQKPVALFQGEEFFYPLNRQNLEQATSAALFMLPNKFSEFEFYKTIVNLSYIGDMRMSLFAENPKKVDNIVSKQ 249
                  ************************************************************************************************** PP

  Tam41_Mmp37 197 leefrelYkplleelenvellekekekeee......kkle.qdlspearaellrkLPkklrskllskyekklskkkkdeeeflkk.iakdeelaeevk 286
                  l  fr+lY p+l +  nv++   +++ ++         le ++ s+ +  +++++LP + r+ +l++  k+      +e++++ +  ++++++ + + 
   EPX74516.1 250 LFYFRKLYLPILYTHFNVSFPFYDSKFHKLnghdptFLLEiEHESTGKANHYFNNLPINYRNLILAAAYKHG----FSENDLWLRtSIQTRQMLSII- 342
                  *****************99987776554446888874444333477788889**********9998844433....344444444044444555554. PP

  Tam41_Mmp37 287 kaikkivaksslkqslkgvltaGvvksvkYaleKlkk 323
                   a+k++ +++ l+qs+kgvltaG+++s++Y+leKlkk
   EPX74516.1 343 -ALKRLTQRPILTQSAKGVLTAGLYRSISYSLEKLKK 378
                  .79********************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (384 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       458  (0.0255452); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.20s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 3062.88
//
Query:       EPX74517.1  [L=731]
Description: Blt1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.033   14.4   0.7      0.033   14.4   0.7    4.5  4  DUF4164   Domain of unknown function (DUF4164)


Domain annotation for each model (and alignments):
>> DUF4164  Domain of unknown function (DUF4164)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.3     0.021   3.8e+02       4      66 ..      98     160 ..      95     195 .. 0.82
   2 ?   -1.2   0.0      0.14   2.6e+03      35      65 ..     233     263 ..     199     282 .. 0.54
   3 ?   14.4   0.7   1.9e-06     0.033       2      79 ..     448     527 ..     447     530 .. 0.93
   4 ?    0.7   0.7     0.037   6.7e+02      14      55 ..     550     595 ..     534     612 .. 0.50

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.021
     DUF4164   4 keleaaltrLeaaldsLEkavdrrleaerkrdeleaeiealgedrsRLaeeLdqaearaarle 66 
                 k+++++l++L++ +++L +   + +e++++ ++l   +e+  + ++    eL +  ++a++le
  EPX74517.1  98 KDNASFLQELQTVVKRLSDTPFQNMESQKSVQDLHYLLEKQSSSQNHQVSELVKDMNKATSLE 160
                 678899999999999999999999999999988887777777777777777777777766666 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.14
     DUF4164  35 deleaeiealgedrsRLaeeLdqaearaarl 65 
                 ++l ++ ++l++  +R ae + q    +++l
  EPX74517.1 233 ASLIERNTELDSLTTRSAEYINQLHTITQKL 263
                 4444444444444444444444444444444 PP

  == domain 3  score: 14.4 bits;  conditional E-value: 1.9e-06
     DUF4164   2 vtkeleaaltrLeaaldsLEkavdrrleaerkrdeleaeiealgedrsRLaeeLdqaea..raarleevnrEvsrrLkaa 79 
                 +t++l++++t+L++ l++L + v r+ +     + + +++++l++  +++ +e d+ ++  +++++++ n+E+ + L+++
  EPX74517.1 448 ATENLKSITTDLNNYLETLKNEVSRMSSLYTGSSFSSKTLSLLTANDEQMQKEVDKENNspELKNVNKNNQELHEHLNST 527
                 57899**************************************************987655899*************997 PP

  == domain 4  score: 0.7 bits;  conditional E-value: 0.037
     DUF4164  14 eaaldsLEkavdr.rleaerkr...deleaeiealgedrsRLaeeL 55 
                  +++ +LE + ++  ++ ++ r   ++ ++ +++l++   RL+e+L
  EPX74517.1 550 VEKIHKLELSYTQlNMDYDKVRshyNSKQTAVQELENRSIRLEERL 595
                 4444444433322123333333222223333344444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (731 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1998  (0.11144); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.80u 0.32s 00:00:01.12 Elapsed: 00:00:00.49
# Mc/sec: 4475.33
//
Query:       EPX74518.1  [L=211]
Description: hypothetical protein SOCG_02001 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.082   12.9   1.0        6.2    6.9   0.9    2.8  1  DGF-1_C   Dispersed gene family protein 1 of Trypanosoma cruz


Domain annotation for each model (and alignments):
>> DGF-1_C  Dispersed gene family protein 1 of Trypanosoma cruzi C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.9   0.00035       6.2      48      71 ..     128     151 ..      76     169 .. 0.73

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.00035
     DGF-1_C  48 ttvassyrPPapplqplagdtrsd 71 
                 ++ +s y+ Pa+ lq +  d  s+
  EPX74518.1 128 SSSVSEYQSPASHLQNMEFDRLSE 151
                 345677888888888888777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       976  (0.0544369); expected 358.6 (0.02)
Passed bias filter:                      463  (0.0258241); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.44
# Mc/sec: 1447.33
//
Query:       EPX74519.1  [L=1490]
Description: DNA topoisomerase II [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   3.9e-126  421.4   0.0   6.5e-126  420.7   0.0    1.3  1  DNA_topoisoIV  DNA gyrase/topoisomerase IV, subunit A
    1.2e-47  161.4   6.0    1.6e-47  161.0   1.5    2.6  2  TOPRIM_C       C-terminal associated domain of TOPRIM
    2.9e-27   95.2   0.5    6.7e-27   94.1   0.5    1.6  1  DNA_gyraseB    DNA gyrase B
    3.1e-14   53.4   0.0    8.2e-14   52.1   0.0    1.8  1  HATPase_c      Histidine kinase-, DNA gyrase B-, and HSP90-li
      1e-08   35.3   0.0    2.9e-08   33.9   0.0    1.8  1  Toprim         Toprim domain


Domain annotation for each model (and alignments):
>> DNA_topoisoIV  DNA gyrase/topoisomerase IV, subunit A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  420.7   0.0  1.8e-129  6.5e-126       1     425 [.     736    1186 ..     736    1187 .. 0.96

  Alignments for each domain:
  == domain 1  score: 420.7 bits;  conditional E-value: 1.8e-129
  DNA_topoisoIV    1 RaiPsvrDGlKPvqRriLyamfkllnldkkekKvaqlvGev..lgkYhPHGdaslydaivrlaqdfvg..niplldpqGnfGsildgdkd.Aaa 89  
                     R+iPsv+DGlKP+qR+i++ + k +n  +++++v++l+G+v   ++Yh HGd+sl ++iv+laq+fvg  ni+ll+p+G+fG++l+g+kd Aa+
     EPX74519.1  736 RSIPSVVDGLKPGQRKIIHYCLK-KNI-TRQIRVSNLTGYVmsETAYH-HGDSSLTQTIVNLAQNFVGsnNINLLMPHGQFGTRLEGGKDaAAP 826 
                     9**********************.677.9************77679**.********************************************* PP

  DNA_topoisoIV   90 RYietrLskiarellkeidketvdyqenyDgsekEPevlppiiPnlLvnGaeGIavGmatkipphnlkeiidaliallkgeeaellelvlgPdf 183 
                     RYi+t Ls+iar+l+k +d+++++yq++ +g+++EP++++pi+P++LvnGaeGI++G++t+ip++n+k+i +++++ll++e   l+  ++ P++
     EPX74519.1  827 RYINTCLSPIARKLFKIEDDPLMNYQNE-EGQWIEPDYYVPILPMILVNGAEGIGTGWSTNIPNYNPKDISANIRRLLNNEP--LF--EISPWY 915 
                     ****************************.****************************************************4..55..58**** PP

  DNA_topoisoIV  184 ptgggiigkeeikeayetgrGkikvrakveieektivitElPigvntskliekieelv.kkkkik..isdirdesdr.gvrivielkrgaseek 273 
                     ++++g ++k   +++y+ + G i++ ++++     ++itElP++ +t++++e +e  +  ++k++  i+d++    + +v+++++l+++ ++e 
     EPX74519.1  916 RGFRGGMEKVA-SDKYKVT-GIINQISDLK-----VEITELPVRFWTQDMKEYLEMGIaGSDKVSpfIKDYEGFHGTgNVHFRVTLTEKGMREA 1002
                     *******6665.999****.****999966.....9********************99866677779*******7777**********999999 PP

  DNA_topoisoIV  274 vleklykktkLessisvnnlvlfdk.k..pkylslkeilkeflevrlevyerrkeyllekleerleilegllkalnkidevievirkskk.ekk 363 
                       e+l++k+kL ++ +++n+++fd  +  +ky s++eil++f+e rl++y+rrke l+++le+++++ +      n++++v+++i+++++ +kk
     EPX74519.1 1003 LAESLESKFKLARNQATSNMMAFDPsGriKKYESVEEILRDFFEIRLRTYQRRKELLVAELERQFDMFS------NQARFVHMIIENELVvSKK 1090
                     99***********************658*****************************************......***************9*** PP

  DNA_topoisoIV  364 akkeLieelse....................................eqaeyllemrlrrLtkeeveklekeieelekeikelekllaklkkli 421 
                     +++ L++el+e                                    ++++yll+m +++Lt e++  l k+++++ +e+++l kl++k  +l+
     EPX74519.1 1091 KRDVLVAELREkgfmpiskpkkgreadmeaeraqlrgedpaetqgssSDYNYLLSMAIWSLTYEKYLDLLKKRDDTMAELDALIKLTPK--DLY 1182
                     ***********************************************99***************************************9..888 PP

  DNA_topoisoIV  422 keel 425 
                      ++l
     EPX74519.1 1183 LQDL 1186
                     8776 PP

>> TOPRIM_C  C-terminal associated domain of TOPRIM
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.2     0.081   2.9e+02      32      55 ..     217     240 ..     208     263 .. 0.80
   2 !  161.0   1.5   4.4e-51   1.6e-47       1     128 []     608     734 ..     608     734 .. 0.99

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.081
    TOPRIM_C  32 enlkkwkikYYkGLgtstskeake 55 
                 e+++k+++k Yk ++t +++e k+
  EPX74519.1 217 ETADKYQMKKYKQVWTDNMSEKKD 240
                 56789************9999886 PP

  == domain 2  score: 161.0 bits;  conditional E-value: 4.4e-51
    TOPRIM_C   1 FitPivkvtkkkkeeisffslpeyeewkestenlkkwkikYYkGLgtstskeakeyfsnldkhlkefkleeeedkeaielaFskkkaderkewlkklep 99 
                 FitPivk+++++ ++i f++l+eye wke++++ ++w+ikYYkGLgts+++e+k+yfs+ld+h+k f+  +e dk +ie+aF kkkad+rkewl++++p
  EPX74519.1 608 FITPIVKCKRNR-QVIPFYTLSEYEYWKEANNDGRGWDIKYYKGLGTSDANEMKSYFSDLDRHMKYFHEIKEADKGLIEMAFAKKKADSRKEWLRTYHP 705
                 9********875.9************************************************************************************* PP

    TOPRIM_C 100 gtyldkkkkkisysdFvnkeLilfsmadn 128
                 g ++d ++ +i+++dF+nkeLi+fsmadn
  EPX74519.1 706 GIFMDYTVPRIPIDDFINKELIQFSMADN 734
                 ****************************8 PP

>> DNA_gyraseB  DNA gyrase B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.1   0.5   1.9e-30   6.7e-27       1     169 [.     304     463 ..     304     467 .. 0.85

  Alignments for each domain:
  == domain 1  score: 94.1 bits;  conditional E-value: 1.9e-30
  DNA_gyraseB   1 Glkdfveelnkdkkelike...vlsvegekaveevievevalqwtssyse.nilsFvNniatpeGGtHvdgfksaltktlneyakkkkllkkkeekis 94 
                  G+k +v+++ +++++  +e   v++++    v++++e+++a+   s ++e n++sFvNniat  GGtHv+++++ ++k++ne ++kk++   ++  ++
   EPX74519.1 304 GFKKYVDMYLSSSTPSDTEsptVIYER----VNDRWEIAFAV---S-DEEfNQVSFVNNIATIRGGTHVNYIADHIVKAVNEDVQKKNK---GA-PVR 389
                  89*********9655544332233333....36679999999...5.4555***********************************996...55.9** PP

  DNA_gyraseB  95 gediregltavvsvkipepqFeGQTKekLgnsevksivekvvseeleafleenkeeakkilekaveaakareaar 169
                  + +i++ + ++v+++i++p+F++QTKe+L+++ ++   + + s ++ + +++ +e+++k+l+ a ++a++++ + 
   EPX74519.1 390 PFQIKNFIRIFVNCQIENPSFDSQTKETLTTKVSNFGSTCTPSANFMNRVKK-SEIIEKVLDLARSRADKQLSQT 463
                  *********************************999999999********99.8999999999999888887655 PP

>> HATPase_c  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.1   0.0   2.3e-17   8.2e-14       3     111 ..     115     262 ..     113     263 .. 0.76

  Alignments for each domain:
  == domain 1  score: 52.1 bits;  conditional E-value: 2.3e-17
                 HHHHHHHHHHHHHHHHHH...HSTTTEEEEEEEEEETEEEEEEEESSSSSTTHHHT........GTCSTTCH.....HCSTCHTSTSSSHHHHHHHH.H CS
   HATPase_c   3 ekrLrqiisnlvdNavkf...atkageieveikaseddlvisveDnGiGipkedlk........klfekfsq.....ddstkrggggtGlGlsivkk.l 84 
                  ++L++i+++++ Na+++    +++++++v+i+ +e  +visv +nG+Gip+e+++        ++f+++ +     d+++k++gg++G+G+++++   
  EPX74519.1 115 VPGLYKIFDEIIVNAADNkvrDPTMNTLKVTID-PE-SNVISVFNNGKGIPVEIHDkeqiyipeLIFGHLLTssnydDNQKKVTGGRNGYGAKLCNIfS 211
                 5789999999999999996655699999*****.44.9**************************99997777789988999999***********8855 PP

                 HH.H........TTT..EEEE.............EEETTTEEEEEEEEESS CS
   HATPase_c  85 ve.l........mgG..eiwv.............esepgrGttftftlple 111
                 +e +        m+   ++w               ++p++ t++tf+++l+
  EPX74519.1 212 SEfTvetadkyqMKKykQVWTdnmsekkdpivtdLKRPEEYTKITFKPDLQ 262
                 553344444433331225555766655555554433346799999999986 PP

>> Toprim  Toprim domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   0.0   8.1e-12   2.9e-08       1      88 [.     493     592 ..     493     603 .. 0.82

  Alignments for each domain:
  == domain 1  score: 33.9 bits;  conditional E-value: 8.1e-12
                 EEEEESSHHHHHHHHHTHT...STEEEEEEESSSSEEEHS.TTEEEEE.....ECTTTHHHHHH......HHHHHHHHSEEEEECSSSHHHHHHHHHHH CS
      Toprim   1 elvivEgpsdaktiakalg...sgfqavtaslGhildlet.efkpvye.....eiedkkkvlka......lkelakradeiilatDpDreGeaiawell 84 
                 +lv+ Eg+s+  ++ + l+   ++++ +++++G++l++ + +   +++     ei+ +kk+++        +   +r+ +++++tD D +G++i+ +++
  EPX74519.1 493 VLVLTEGDSARSQALSGLSvvgRDYYGIFPLRGKLLNVREaS---HTQimnnkEIQAIKKIMGLvhkknyTDTKELRYGHLMIMTDQDPDGSHIKGLII 588
                 6999*****9999999999999******************43...3334457788888888888665555666669999******************** PP

                 HHHT CS
      Toprim  85 evlk 88 
                 ++l+
  EPX74519.1 589 NYLE 592
                 8776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1490 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1271  (0.0708907); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.03u 0.30s 00:00:01.33 Elapsed: 00:00:00.46
# Mc/sec: 9654.52
//
Query:       EPX74520.1  [L=370]
Description: 3-isopropylmalate dehydrogenase Leu1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.2e-126  422.5   0.0   1.4e-126  422.4   0.0    1.0  1  Iso_dh    Isocitrate/isopropylmalate dehydrogenase


Domain annotation for each model (and alignments):
>> Iso_dh  Isocitrate/isopropylmalate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  422.4   0.0  7.8e-131  1.4e-126       1     345 [.       5     363 ..       5     366 .. 0.96

  Alignments for each domain:
  == domain 1  score: 422.4 bits;  conditional E-value: 7.8e-131
                 EEEEEEESTTHHHHHHHHHHHHHHHHHHHT.-EEEEEE---THHHHHHHSSSS-HHHHHHHHHSSEEEEEE---CS..SSSSSHHHHHHHHHHHTTEEE CS
      Iso_dh   1 kiallegdgiGpevveaalkvlkaakekag.lelefeevdvGgaaidetgeplpeetleaikeadvvllgavgtpk..ekevrpengLlaLrkeldlfa 96 
                 ki++l+gd+iGpe+v++a++vlk++++k   l++ef+e+++Gga+id+ g+pl++et++a+ ead ++lgavg+p+  + ++rpe+gLl+Lrk+l+++a
  EPX74520.1   5 KIVVLPGDHIGPEIVSSAVEVLKTVEKKCShLKFEFQEHKIGGASIDAFGTPLTDETIKACLEADGIILGAVGGPEwtNPNCRPEQGLLKLRKSLGVWA 103
                 79************************998889*********************************************9********************* PP

                 EEEEEE-B.CCTTCCSSBTHHHHCT-EEEEEEE-SSCGGCSSEEEEETTG.GGGEEEEEEEEEHHHHHHHHHHHHHHHHHT.TTSEEEEEESTTTTHHH CS
      Iso_dh  97 nlrpvkvf.eklkvksplkrevveevdlvivReltggiYfgeekekkgsifteevavdtklyseeeieriaraafelAlkr.gkkkvtlvdKanvlkss 193
                 nlrp+++  ++l + splk+e++e+vd+++vReltgg+Yfge++e++gs+     a+dt++ys ee+ riar+a++lA++  ++++vtl+dKanvl++s
  EPX74520.1 104 NLRPCTFPsKSLLKYSPLKSEIAEGVDFCVVRELTGGCYFGERTEDNGSG----HAMDTWPYSVEEVTRIARLAAWLAQTYnPPAPVTLLDKANVLATS 198
                 *******999**************************************97....9************************98799*************** PP

                 HHHHHHHHHHHCCTTTTSEEEEEEHHHHHHHHHHSG.GGGSEEEE-HHHHHHHHHHHHHHTTSGCC-EEEEEET......SS-EEEEESS---CCCTTS CS
      Iso_dh 194 elwrkiveevaeeeypdielehqlvDsaamqlvksp.kqfdVivtkNlfGDilSDeaaalvGslGllpSaslge......kkvaifEavHGsapdiagk 285
                 +lwrk+v++v++ee+p+++l++ql+Dsaam +vk+p + ++V++t+NlfGDi+SDe ++++GslGllpSasl+       +  +++E++HGsapdiag+
  EPX74520.1 199 RLWRKTVAKVFKEEFPHLTLKNQLIDSAAMLMVKNPrALNGVVLTDNLFGDIISDESSVIPGSLGLLPSASLSGiygqteNLNCLVEPIHGSAPDIAGQ 297
                 ************************************77778********************************9999998889**************** PP

                 S-S-THHHHHHHHHHHHHTTT-HHHHHHHHHHHHHHHHH......TSCCHHHCTTSTCCCHHHHHH CS
      Iso_dh 286 dkaNpiavilSaalmLryslgleeaAdkiekAvekvlea......givTkDlageaakevstsefg 345
                 +++Np+++ilS al+Lry+l+++++A++ie+Avekvl++      g +T+Dl+g a+++  t++++
  EPX74520.1 298 GIVNPVGTILSGALLLRYALNAHKEAAAIESAVEKVLNDasiggrGLYTRDLGGDAKTVDITKAVV 363
                 **************************************999999999********95555565555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (370 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       285  (0.015896); expected 358.6 (0.02)
Passed bias filter:                      277  (0.0154498); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.20s 00:00:00.66 Elapsed: 00:00:00.37
# Mc/sec: 2990.65
//
Query:       EPX74521.1  [L=180]
Description: anaphase-promoting complex subunit Apc10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-66  223.6   0.0    1.6e-66  223.5   0.0    1.0  1  ANAPC10       Anaphase-promoting complex, subunit 10 (APC10)
  ------ inclusion threshold ------
      0.011   15.8   0.0      0.018   15.2   0.0    1.4  1  F5_F8_type_C  F5/8 type C domain


Domain annotation for each model (and alignments):
>> ANAPC10  Anaphase-promoting complex, subunit 10 (APC10)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  223.5   0.0   1.8e-70   1.6e-66       5     184 ..       2     177 ..       1     178 [. 0.96

  Alignments for each domain:
  == domain 1  score: 223.5 bits;  conditional E-value: 1.8e-70
     ANAPC10   5 akssdekqesragivrdlreigkeavwsvsSakpgngvellrddnldtyWqsdgsqPHlvniqfqkktevkavalyvdyklDeSYtPskirvraGtgfn 103
                 +ks++e+q+ ++g+v    +ig+ a+w++sS+k+g++++l+rddn++tyWqsdgsqPH ++i+f k+++vk+++ly++y+ DeSYtP ++r++aGtgf+
  EPX74521.1   2 KKSKSETQKLTDGLV----DIGNLAQWTCSSEKSGFPIRLVRDDNVETYWQSDGSQPHDIHIKFVKRVSVKYISLYLQYTFDESYTPDRLRISAGTGFH 96 
                 577899999999999....9******************************************************************************* PP

     ANAPC10 104 dlkevkkvdleeptGWvkislkd.arekllrvfllqiavlsnhqnGrdthvrqikiygPveeksevaarlikftsaefevrt 184
                 dl+ v++v+leeptGWv++++ d +r+ ll++ l+ +++l nhqnG+d+hvr +k+y+P+++ + ++ ++  +ts++f++r+
  EPX74521.1  97 DLELVTTVQLEEPTGWVHVPVGDfGRNGLLDANLIEVKILGNHQNGKDSHVRLMKVYAPETHFNFSI-DELPYTSTQFKSRN 177
                 ***********************9999********************************88887766.8899*****99886 PP

>> F5_F8_type_C  F5/8 type C domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.0     2e-06     0.018       2      58 ..      24      78 ..      23     107 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 2e-06
                  EEESSCSSTTTGGGGGGSSSTTSSEEESSSSTTEEEEEEEEEEEEEEEEEEEECSST CS
  F5_F8_type_C  2 itasseesgewpaaaaldGnkntaWsssssddkqwlqvdLgkpkkidgvvtqgrqdg 58
                   t+sse  ++ p + + d n +t+W s++s++ + + +++ k   ++ + ++     
    EPX74521.1 24 WTCSSE-KSGFPIRLVRDDNVETYWQSDGSQP-HDIHIKFVKRVSVKYISLYLQYTF 78
                  589999.9999*******************99.*************99998876655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       316  (0.0176251); expected 358.6 (0.02)
Passed bias filter:                      286  (0.0159518); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.28s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 1285.86
//
Query:       EPX74522.1  [L=268]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.8e-15   57.5   0.8    1.8e-15   57.5   0.8    2.3  3  GPI-anchored  Ser-Thr-rich glycosyl-phosphatidyl-inositol-anc


Domain annotation for each model (and alignments):
>> GPI-anchored  Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.5   0.8     1e-19   1.8e-15       2      93 .]      22     108 ..      21     108 .. 0.92
   2 ?   -2.5   1.7      0.52   9.4e+03      57      57 ..     160     160 ..     117     197 .. 0.64
   3 ?   -2.7   0.4      0.58     1e+04      50      65 ..     217     232 ..     203     250 .. 0.61

  Alignments for each domain:
  == domain 1  score: 57.5 bits;  conditional E-value: 1e-19
  GPI-anchored   2 sPssgevvtag.kpvtitWkdsgtdpgtvtlvLcagssnnlksvktiasgiknsdgsytwtvpaslesggaYflqiv.sesnegiynySdrFti 93 
                   +P++++v++ g  ++t++W++   ++ tvtl+L++g++++l +++tias+ikn+ g+y w++p++ +s+++Y l+++ ++++     yS++Ft+
    EPX74522.1  22 APATNAVIQEGgGAYTVSWSN--LTSDTVTLTLLSGGNDKLVPLETIASNIKNT-GTYGWDIPTHFPSADNYLLSVSwDGGE----SYSKYFTL 108
                   79*******99455*******..689***************************9.**********************66666....6*****96 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.52
  GPI-anchored  57 s 57 
                   +
    EPX74522.1 160 K 160
                   1 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 0.58
  GPI-anchored  50 giknsdgsytwtvpas 65 
                   + ++s++s++ + ++s
    EPX74522.1 217 STSGSSKSTSGSSSSS 232
                   3444444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (268 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1448  (0.080763); expected 358.6 (0.02)
Passed bias filter:                      588  (0.032796); expected 358.6 (0.02)
Passed Vit filter:                       145  (0.00808746); expected 17.9 (0.001)
Passed Fwd filter:                        52  (0.00290033); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.98u 0.36s 00:00:01.34 Elapsed: 00:00:00.52
# Mc/sec: 1544.01
//
Query:       EPX74523.1  [L=520]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (520 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       573  (0.0319594); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 3517.62
//
Query:       EPX74524.1  [L=584]
Description: hypothetical protein SOCG_02007 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.1e-14   53.0   0.1    4.6e-14   51.9   0.1    1.5  1  ubiquitin    Ubiquitin family
    2.9e-05   24.6   0.1    2.9e-05   24.6   0.1    2.1  3  DUF2407      DUF2407 ubiquitin-like domain
    0.00024   21.2   0.0    0.00066   19.8   0.0    1.8  1  Rad60-SLD_2  Ubiquitin-2 like Rad60 SUMO-like
     0.0073   16.1   0.6      0.037   13.9   0.2    2.2  2  Rad60-SLD    Ubiquitin-2 like Rad60 SUMO-like


Domain annotation for each model (and alignments):
>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.9   0.1     1e-17   4.6e-14       1      70 [.       9      80 ..       9      81 .. 0.96

  Alignments for each domain:
  == domain 1  score: 51.9 bits;  conditional E-value: 1e-17
                EEEEETTSEEEEEEEETTSBHHHHHHHHHHHHTSSGGGEEEEETTEEE-TTSBHGGH..TTSTTEEEEEEES CS
   ubiquitin  1 itvktldgkkitleveesdtveelKekiaekegipaeqqrLiysGkvLedertleey..giqdgstlhlvlr 70
                i v+t d+k   ++v++++tv++lK+ ia +++ p+++++Liy+G+vL+de tl+++  +++d  t hlv++
  EPX74524.1  9 IRVTTVDQKVGIFQVARDKTVLDLKNIIAPTFEAPVDRLKLIYAGRVLRDETTLSSIlnDVTDLVTFHLVIS 80
                7899999999999********************************************9999999*****996 PP

>> DUF2407  DUF2407 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.1   6.5e-09   2.9e-05      13      71 ..      15      72 ..       7     136 .. 0.79
   2 ?   -3.9   0.1         4   1.8e+04      17      30 ..     206     219 ..     204     228 .. 0.71
   3 ?   -2.7   0.1         2   8.8e+03      81      81 ..     528     528 ..     501     559 .. 0.45

  Alignments for each domain:
  == domain 1  score: 24.6 bits;  conditional E-value: 6.5e-09
     DUF2407 13 DleLdipdpnt.ttvagLkqliRerlpaelasrrLrLIyaGrlLedttslasslklpees 71
                D ++ i ++++  tv  Lk++i      e+   rL+LIyaGr+L+d+t+l+s l+  ++ 
  EPX74524.1 15 DQKVGIFQVARdKTVLDLKNIIAPTF--EAPVDRLKLIYAGRVLRDETTLSSILNDVTDL 72
                6677777666659**********999..77788******************999877554 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 4
     DUF2407  17 dipdpntttvagLk 30 
                  +p+p+ttt++++ 
  EPX74524.1 206 PVPNPTTTTTTSIT 219
                 57788888887765 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 2
     DUF2407  81 e 81 
                 +
  EPX74524.1 528 R 528
                 2 PP

>> Rad60-SLD_2  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   1.5e-07   0.00066      11      88 ..      15      80 ..       5     103 .. 0.66

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 1.5e-07
                 TS-EEEEEEEETT-BHHHHHHHHHHHS-TT-SSS--SCCCEEEEETTEEE-TTSBCCCCS-TTTTTTTS-EEEEEEE- CS
  Rad60-SLD_2 11 dGsDigpvkfsdaatvaelkekviaqWPkdkeekpksvndlklilaGkiLennktlkelrlplgevkggvtvmHvvvr 88
                 d + +g ++    +tv +lk+ +            + v+ lkli+aG++L +  tl+++  ++ ++    +++H+v++
   EPX74524.1 15 DQK-VGIFQVARDKTVLDLKNIIAPTF-------EAPVDRLKLIYAGRVLRDETTLSSILNDVTDL----VTFHLVIS 80
                 555.55555555666666655544322.......245788*******************9999999....78888775 PP

>> Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.2   8.2e-06     0.037       2      71 ..       8      78 ..       7      79 .. 0.85
   2 ?   -0.5   0.0      0.25   1.1e+03      23      42 ..     515     534 ..     513     540 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 8.2e-06
                EEEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEEETTEE--TTSBGGG..SS--TTEEEEEE CS
   Rad60-SLD  2 kiilkgkdgkevkikVkptttvskLieayrkkkgipeeqkvrLiFDGeeLdpnstved..ldiedgdtidvv 71
                ki +++ d+k   ++V+++ tv +L++  +   + p+ ++ +Li+ G+ L+++ t+ +  +d++d  t+++v
  EPX74524.1  8 KIRVTTVDQKVGIFQVARDKTVLDLKNIIAPTFEAPV-DRLKLIYAGRVLRDETTLSSilNDVTDLVTFHLV 78
                6778888999999************************.*****************98733366666666666 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.25
                 HHHHHHHHHHHHT----TT- CS
   Rad60-SLD  23 vskLieayrkkkgipeeqkv 42 
                 v+++ ++yr++++ ++ + v
  EPX74524.1 515 VRNVQNEYRQRRNRSNPEVV 534
                 78899********9997665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (584 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       756  (0.0421663); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.63u 0.28s 00:00:00.91 Elapsed: 00:00:00.46
# Mc/sec: 3831.83
//
Query:       EPX74525.1  [L=437]
Description: phosphatidylserine decarboxylase Psd1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.9e-75  250.6   0.0    1.4e-71  240.2   0.0    2.1  1  PS_Dcarbxylase  Phosphatidylserine decarboxylase


Domain annotation for each model (and alignments):
>> PS_Dcarbxylase  Phosphatidylserine decarboxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  240.2   0.0   7.8e-76   1.4e-71       1     199 [.     132     431 ..     132     432 .. 0.98

  Alignments for each domain:
  == domain 1  score: 240.2 bits;  conditional E-value: 7.8e-76
  PS_Dcarbxylase   1 lneffvrklkdgaRpidddpgaivsPaDgrilqigeieegsviqvKgityslrdLlgeasess................................ 63 
                     l+eff+rklk+g+Rpi d+++ +vsPaDg++l++g ie g ++qvKg tysl++Llg+++                                   
      EPX74525.1 132 LAEFFTRKLKPGCRPI-DSEAILVSPADGKVLNYGVIEGGHLEQVKGLTYSLEALLGQEHLARlkkahaipspehiphisqeefalvngieyslq 225
                     689*************.88889************************************99988******************************** PP

  PS_Dcarbxylase  64 ........................................adsfkngyfvviyLspgdyHryhaPvsgkveerrhipGellsvnpsalkelrglf 118
                                                              ++ + +y++v+yL+pgdyHr+h+P++++ve+rrh+ Gel+sv+p+++++l +lf
      EPX74525.1 226 dlmghdneysqnsikdasanqvdllnstkvamrstfdflrSRDQNLLYYAVVYLAPGDYHRFHSPTDWVVERRRHFSGELFSVSPYMVSKLGNLF 320
                     ***************************************9889999************************************************* PP

  PS_Dcarbxylase 119 tlneRvvlvie.wkGkvavvpvGatnvgsivln.............................vlkgdelkkGeelGyFqfGStvvlvfeagkfie 183
                     +lneRv+++++ ++G+++++pvGatnvgsi++n                             +l+g++l +Gee+G F++GStvvlvfea+ +++
      EPX74525.1 321 VLNERVAMLGRyKYGFMSMIPVGATNVGSIRINfdkelctnqfgklgptgtydeavytkssaILHGHPLLRGEEIGNFELGSTVVLVFEAPANFQ 415
                     ***********88*************************************************99***************************999* PP

  PS_Dcarbxylase 184 slvekgqkvkmGeklg 199
                     ++++ gq+vk+G+++g
      EPX74525.1 416 FDIQRGQHVKVGQSIG 431
                     **************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (437 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       328  (0.0182944); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 3191.16
//
Query:       EPX74526.1  [L=399]
Description: meiosis-specific cyclin Rem1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.3e-27   94.1   0.0    1.1e-26   93.0   0.0    1.6  1  Cyclin_N  Cyclin, N-terminal domain
    9.7e-19   67.6   0.7    4.5e-18   65.5   0.1    2.2  2  Cyclin_C  Cyclin, C-terminal domain


Domain annotation for each model (and alignments):
>> Cyclin_N  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.0   0.0   1.3e-30   1.1e-26       1     126 [.     142     266 ..     142     267 .. 0.96

  Alignments for each domain:
  == domain 1  score: 93.0 bits;  conditional E-value: 1.3e-30
                 HHHHHHHHHHCHTS-STTCTTCTSSS-HHHHHHHHHHHHHHHHHTT--TTHHHHHHHHHHHHHHHS---CCCHHHHHHHHHHHHHHHHSSS---HHHHH CS
    Cyclin_N   1 dilknlieqelkflpkpdyldqqpelnpemRailidwlvevaekfkltpetlflavnyldRflskksvpkdklqlvgatcLllAaKveeisppkledlv 99 
                 di+ ++++ e++ +p+  yl ++p    emR+++i+w++ ++ +++l petlfla n++dRf+s k+v  +k++ +++++LllA+K+eei+pp+ ++ +
  EPX74526.1 142 DIFCHMKHLENRLMPDYGYLASRPFHVLEMRTVVISWIIGIHYEMNLLPETLFLATNIFDRFFSLKNVAISKMKQIAMAALLLASKYEEIHPPSNKEAC 240
                 7999****************99998777*********************************************************************** PP

                 HHTTTSS-HHHHHHHHHHHHHHTTT-- CS
    Cyclin_N 100 yitdeafteeeilemErliLetLnfdl 126
                  + +e  t  ++++ E +iL +L+++l
  EPX74526.1 241 SLLGE-GTVGDLCKEETYILIVLQYEL 266
                 **885.5589***************98 PP

>> Cyclin_C  Cyclin, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.14   1.3e+03      45      58 ..     215     228 ..     207     244 .. 0.79
   2 !   65.5   0.1     5e-22   4.5e-18       1     109 [.     269     374 ..     269     384 .. 0.93

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.14
                 HHHHHHHHHHCCHH CS
    Cyclin_C  45 SliAaaalllarst 58 
                  +iA aallla++ 
  EPX74526.1 215 KQIAMAALLLASKY 228
                 689****9999875 PP

  == domain 2  score: 65.5 bits;  conditional E-value: 5e-22
                 --HHHHHHHHHCCSSHT.-HCCHHCHHCHHHHHHCSCCHCCS-HHHHHHHHHHHCCHHHHS--S-HHHHHHC---HHHHHHHHHHHHHHHHHHHGSS-- CS
    Cyclin_C   1 ptplsFlrrflkaadasedselrtlakylleltlldydflsyppSliAaaalllarstlnspewtetlehytgyskedlkpcvelilellssapssklq 99 
                 p p+ ++r+++ +++   d+++r  +ky+le+++ld +fls + S+  a++ + a ++l +++w+ tl+++tgy+  ++ p ++l+le+l ++p ++++
  EPX74526.1 269 PGPMPYMRLLSISDGW--DADMRLAVKYFLEICMLDPRFLSQKASQTVATCAYTAYCILHNGNWSGTLHKLTGYHCANVAPFMHLLLECL-QNPAENHR 364
                 78********999888..788**9******************************************************************.78889*** PP

                 HHCCCCTCGG CS
    Cyclin_C 100 avrrkysssk 109
                  v+ kys++ 
  EPX74526.1 365 CVYAKYSTRI 374
                 *******765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (399 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       870  (0.0485247); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 2706.54
//
Query:       EPX74527.1  [L=781]
Description: Lsd90 protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (781 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2266  (0.126387); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        73  (0.00407162); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.08u 0.33s 00:00:01.41 Elapsed: 00:00:00.52
# Mc/sec: 4521.71
//
Query:       EPX74528.1  [L=90]
Description: heat shock factor binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      1e-07   31.7   1.1    1.5e-07   31.2   1.1    1.2  1  HSBP1           Heat shock factor binding protein 1
    0.00034   20.4   0.4      0.023   14.6   0.2    2.1  2  Matrilin_ccoil  Trimeric coiled-coil oligomerisation domain o
  ------ inclusion threshold ------
      0.028   14.8   0.1      0.066   13.6   0.0    1.7  2  Caskin-tail     C-terminal region of Caskin
      0.069   13.0   0.0      0.082   12.8   0.0    1.1  1  Apolipoprotein  Apolipoprotein A1/A4/E domain
       0.14   12.8   0.0       0.17   12.5   0.0    1.2  1  DUF883          Bacterial protein of unknown function (DUF883


Domain annotation for each model (and alignments):
>> HSBP1  Heat shock factor binding protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2   1.1   4.1e-11   1.5e-07       4      46 ..      22      64 ..      20      68 .. 0.91

  Alignments for each domain:
  == domain 1  score: 31.2 bits;  conditional E-value: 4.1e-11
       HSBP1  4 tavVenlLqqlqdkFqtmsdqilsriDdMssriDdLEksiadl 46
                +a+  +lL+++++ F+++ +q l++++ M++r+D+LE s+   
  EPX74528.1 22 NAMTNKLLDDVSNEFENLRKQFLEKLEAMTHRLDSLEDSMRAS 64
                577889*********************************9865 PP

>> Matrilin_ccoil  Trimeric coiled-coil oligomerisation domain of matrilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.8   0.0    0.0035        13      20      41 ..      17      39 ..      15      42 .. 0.80
   2 !   14.6   0.2   6.3e-06     0.023      22      43 ..      38      59 ..      31      61 .. 0.73

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0035
                    HHHHHHHHHHH.HHHHHHHHHHH CS
  Matrilin_ccoil 20 VeseiqaLtqk.LeavtkRleal 41
                    + s i+a+t k L++v++  e l
      EPX74528.1 17 TGSGINAMTNKlLDDVSNEFENL 39
                    667899****879****977766 PP

  == domain 2  score: 14.6 bits;  conditional E-value: 6.3e-06
                    HHHHHHHHHHHHHHHHHHHHHH CS
  Matrilin_ccoil 22 seiqaLtqkLeavtkRlealEn 43
                    +  +++ +kLea+t Rl  lE+
      EPX74528.1 38 NLRKQFLEKLEAMTHRLDSLED 59
                    334555569************7 PP

>> Caskin-tail  C-terminal region of Caskin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.8e-05     0.066      31      60 ..      17      50 ..       5      55 .. 0.73
   2 ?   -0.8   0.0      0.57     2e+03      21      28 ..      53      60 ..      44      77 .. 0.51

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.8e-05
  Caskin-tail 31 ssaaevksaknILdDIgnMFDdLADQ....LDAM 60
                 +++  +  ++++LdD++n F +L  Q    L+AM
   EPX74528.1 17 TGSGINAMTNKLLDDVSNEFENLRKQflekLEAM 50
                 345558899**************98844445666 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.57
  Caskin-tail 21 kikqeese 28
                 ++ + e++
   EPX74528.1 53 RLDSLEDS 60
                 33333333 PP

>> Apolipoprotein  Apolipoprotein A1/A4/E domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   2.3e-05     0.082     143     186 ..      23      66 ..      13      74 .. 0.67

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2.3e-05
                     --..-----SSSHHHHHHHTS-TTSHHHHHS--XXXXXXXXXXX CS
  Apolipoprotein 143 phaeeveerlssrveelrekleeqaeelrerleanleelkaqle 186
                     + + ++ + +s++ e+lr+++ e++e++++rl+   ++++a ++
      EPX74528.1  23 AMTNKLLDDVSNEFENLRKQFLEKLEAMTHRLDSLEDSMRASFN 66 
                     44455556666777777777777777777777777777777665 PP

>> DUF883  Bacterial protein of unknown function (DUF883)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   4.6e-05      0.17      15      59 ..      22      66 ..      13      77 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 4.6e-05
      DUF883 15 eellkeaadeageeaeelRerleerlerarerlrdaeeavaerak 59
                ++++++  d+  +e e+lR++  e+le++ +rl+ +e++++++ +
  EPX74528.1 22 NAMTNKLLDDVSNEFENLRKQFLEKLEAMTHRLDSLEDSMRASFN 66
                55666666788899*************************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1179  (0.0657594); expected 358.6 (0.02)
Passed bias filter:                      794  (0.0442858); expected 358.6 (0.02)
Passed Vit filter:                        93  (0.00518713); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 635.12
//
Query:       EPX74529.1  [L=392]
Description: cation diffusion family zinc membrane transporter Zrg17 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.8e-15   56.1  16.9    5.1e-15   55.7  16.9    1.1  1  Cation_efflux  Cation efflux family
  ------ inclusion threshold ------
        1.9    7.4  11.2         12    4.8  11.1    1.9  1  Pex24p         Integral peroxisomal membrane peroxin


Domain annotation for each model (and alignments):
>> Cation_efflux  Cation efflux family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.7  16.9   5.7e-19   5.1e-15       2     196 ..     108     300 ..     107     303 .. 0.88

  Alignments for each domain:
  == domain 1  score: 55.7 bits;  conditional E-value: 5.7e-19
  Cation_efflux   2 ilsllanlilalvelivglltnSlalladafhslsdlvsllllllalklsrkppderfpfGygrlevlgalvsgllllglavfllleaiqkli... 94 
                    +l+++a ++++l + +++ll+ S++l+++++  +++++ ++l  ++++   + ++ r+pfG++++e l+ +  ++lll+l+++ll e  +++i   
     EPX74529.1 108 LLFFFASVFVFLSGDATVLLSLSCSLIVEGVLIILNVWRETLDCFVVW---RRTSLRYPFGLQQIELLADFAFSILLLFLGLNLLKEPAEHAIedw 200
                    68999*******************************************...6679***************************************** PP

  Cation_efflux  95 .......kegereihaglalvvalvslvvnlalllilrragrklrsaalkaaalhvlgDaltslgvlvsalvillfnlksgplaDpvaslliglii 183
                           + g++  h+  ++ ++++ l+   all+       +++s+ l + ++h l+ + +s+  ++ +++i ++      l+ +++++ i++ +
     EPX74529.1 201 gniqhseHAGVEGAHIQSIFSISVALLLSGGALLFDRS----HIHSQRLDSRFFHGLTFVPSSILFVLRSVGIQVG-----SLVSHIFAISIAVTV 287
                    ****8866666666666666666666666666665554....56**************999**********99997.....5899*********** PP

  Cation_efflux 184 lysalkllkesls 196
                    ++ +++++k+   
     EPX74529.1 288 VIVGFSIAKSLAM 300
                    *******998655 PP

>> Pex24p  Integral peroxisomal membrane peroxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8  11.1    0.0013        12      22     224 ..      85     318 ..      73     338 .. 0.77

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0013
      Pex24p  22 ifplllildkvlkiltWtnpdktlsfllvytficlvpyl....elvvlplllllfvvmvpaylyrhplrksslik........................ 92 
                 + p+l   ++  +iltW+++ k  s ll++ ++++v +     +l++l + l++ +v+++  ++r  l+  ++ +                        
  EPX74529.1  85 PIPTL---TETFSILTWRQKLKLSSSLLFFFASVFVFLSgdatVLLSLSCSLIVEGVLIILNVWRETLDCFVV-Wrrtslrypfglqqielladfafsi 179
                 44555...89999***********************9998888888888888888899999999865555555.3577777788888888888888888 PP

      Pex24p  93 .........keesknestsegptldeaskeivlnLrdlqnkmedllnpidalekflkelagfkdenlstllfltllltpililllsrlipwrlillvlg 182
                           +e ++   ++  +++  s++  ++   +q  +++ +  + +  ++l    ++  ++l + +f +l+ +p+ il+++r + +++  lv+ 
  EPX74529.1 180 lllflglnlLKEPAEHAIEDWGNIQ-HSEHAGVEGAHIQSIFSISVALLLSGGALLFDRSHIHSQRLDSRFFHGLTFVPSSILFVLRSVGIQVGSLVSH 277
                 8888887774444555555555555.34444455578999999999999999999999999************************99999999999999 PP

      Pex24p 183 ailltyHpsvkkvllrllwrlkivrlvvkyltgkelkkaksk 224
                 ++++++  +v  v ++ + ++++++l+++y  ++++ +  s 
  EPX74529.1 278 IFAISIAVTVVIVGFS-IAKSLAMLLLLTYSSKEKVLQCVSL 318
                 9999998888888888.6688888888888888887655444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (392 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       818  (0.0456244); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.21s 00:00:00.73 Elapsed: 00:00:00.37
# Mc/sec: 3178.66
//
Query:       EPX74530.1  [L=471]
Description: RAN protein kinase Ksp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      3e-44  151.4   0.0    5.6e-44  150.5   0.0    1.4  2  Pkinase      Protein kinase domain
      4e-27   95.1   0.0    5.9e-27   94.6   0.0    1.2  1  Pkinase_Tyr  Protein tyrosine kinase
    0.00067   19.6   1.7      0.047   13.6   0.3    3.2  4  APH          Phosphotransferase enzyme family
     0.0008   18.8   0.0     0.0014   18.0   0.0    1.3  1  Kdo          Lipopolysaccharide kinase (Kdo/WaaP) family
  ------ inclusion threshold ------
      0.031   13.9   0.1       0.12   12.0   0.0    1.7  2  FTA2         Kinetochore Sim4 complex subunit FTA2
      0.067   12.5   0.0       0.18   11.1   0.0    1.7  1  Kinase-like  Kinase-like


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.5   0.0   1.9e-47   5.6e-44       1     253 [.       9     265 ..       9     273 .. 0.83
   2 ?   -4.3   0.0       3.1   9.1e+03     136     148 ..     449     461 ..     446     464 .. 0.75

  Alignments for each domain:
  == domain 1  score: 150.5 bits;  conditional E-value: 1.9e-47
                 EEEEEEEEEESSEEEEEEEE.....TTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS...CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHH. CS
     Pkinase   1 yekleklGeGsfGkVykave.....ketgkivAvKkikkekakkkkekkvlrEikilkklk...hpnivrlyevfeekdelylvleyveggeladlle. 90 
                 y++++ l +Gs+G+V+ a++     + ++ ++A+K+i+k +    +      E++il++++   h+ni++++e+fe++ ++y+vley++ g+l + +  
  EPX74530.1   9 YKVERPLNKGSYGTVVLAHRlfrtsRYKDAKYAIKCIRKPSPIFLD------EVNILREFSryrHRNIIHFVESFEDHVYYYVVLEYCPFGDLYECILn 101
                 678889999******9997522222677889********9887655......555555554444****************************9998886 PP

                 ...HHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEE..TTTE...EEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHH...TTSCB.SHH CS
     Pkinase  91 ...rkgslseeeakkiakqilegleylHskgiiHrDlKpeNiLid..ekge...lKitDFGlakelessskltsfvgtseYlAPEvl...keney.skk 177
                     + + ++e +k+i+ q++ g++++Hs gi HrDlKpeN+L++  ++g+   +Ki+DFGla++ + s+  +  +g+ +Y+APE     ++ +y  ++
  EPX74530.1 102 ddfPNAKNQPEMIKDIFLQVIDGVSHMHSLGIYHRDLKPENFLLSlsDDGNdlvVKISDFGLACRDTISH--DYGTGSDRYMAPEQFedvDDMGYsPRA 198
                 87777788899*********************************9634444999*********9988876..8899**********9777778896789 PP

                 HHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCST CS
     Pkinase 178 vDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRl 253
                 +D+W++G+ l++l++ ++pf+  ++++    ++ +      +l+     ++   ++s++  ++l+ +l+++p+kR 
  EPX74530.1 199 ADIWAIGICLLNLIFARNPFAYPNERD---PIFAD-----YVLD-PMTLFDVFPTLSQDTYEVLRACLCVTPEKRS 265
                 9********************666555...22223.....2333.3567889999********************6 PP

  == domain 2  score: -4.3 bits;  conditional E-value: 3.1
                 EEEE-SGTTSEES CS
     Pkinase 136 elKitDFGlakel 148
                 el   DFGla  +
  EPX74530.1 449 ELNAKDFGLADDW 461
                 56678****9876 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.6   0.0     2e-30   5.9e-27       3     250 ..      11     265 ..       9     270 .. 0.84

  Alignments for each domain:
  == domain 1  score: 94.6 bits;  conditional E-value: 2e-30
                  EEEEEEEESSEEEEEEEEET.TTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS...-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHT. CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkg.ekekkevkVavKtlkeeateeekeelleeakimkkl...khpnivkllgvctkeepllivteyvkgGdLlkfLrkk. 95 
                  +++ l +G++G+Vv ++    +++ k+ k a+K++++      +  +l+e++i++++   +h+ni++++    ++  +++v+ey++ GdL + + ++ 
   EPX74530.1  11 VERPLNKGSYGTVVLAHRLFrTSRYKDAKYAIKCIRK-----PSPIFLDEVNILREFsryRHRNIIHFVESFEDHVYYYVVLEYCPFGDLYECILNDd 103
                  67899**********987765889999********43.....2456999999998765558*******************************988884 PP

                  .CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE.....TTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE....EE CS
  Pkinase_Tyr  96 .ekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse.....nkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk....ft 183
                    ++k + + + ++ lqv +G+++++s  + Hrdl   N Lls      + vvkisDfGLa +      + +++ ++ + ++mapE +++        
   EPX74530.1 104 fPNAKNQPEMIKDIFLQVIDGVSHMHSLGIYHRDLKPENFLLSLsddgnDLVVKISDFGLACRD-----TISHDYGTGSDRYMAPEQFEDVDdmgySP 196
                  4456666777889*****************************965666588*********9765.....466666777889******99887777445 PP

                  HHHHHHHHHHHHHHHHTTSSGT..TTTSHHHHHHHHH.HTTEES-BBTTSBHHHHHHHHHHT-SSGGGS- CS
  Pkinase_Tyr 184 sksDvWsfGvllwEiftlgesp..ypglkneevlekl.kegkrlekpekcpeelyelmkkcweedpeeRp 250
                   ++D+W+ G++l  ++  +++p  yp+ ++  +++++ +  +  +   + +++ ye+++ c+  +pe+R 
   EPX74530.1 197 RAADIWAIGICLLNLIF-ARNPfaYPNERDPIFADYVlDPMTLFDVFPTLSQDTYEVLRACLCVTPEKRS 265
                  789*********99876.5555227777777799999566677788999*******************95 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0     0.021        61      39     106 ..      54     129 ..      27     133 .. 0.71
   2 !   13.6   0.3   1.6e-05     0.047     166     219 ..     131     187 ..     126     198 .. 0.83
   3 ?   -0.4   0.0      0.29   8.7e+02     192     207 ..     188     203 ..     183     220 .. 0.89
   4 ?   -1.3   0.0      0.57   1.7e+03     172     185 ..     295     306 ..     294     310 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.021
                 HHHHHHHHHHHTT-B--B-CTTBS-EEETTEEEEEEE----EE-SS..........HHHHHHHHHHHHHHHHHHCCHH CS
         APH  39 revallrlLakagvpvPevlagdtddeeigllfalieyvpgrsllr..........klsaaqlpellealgeflaalh 106
                 +ev +lr +++       ++++ ++ e++ ++++++ey+p  +l++          k++++ +++++ ++++   ++h
  EPX74530.1  54 DEVNILREFSRYRH--RNIIHFVESFEDHVYYYVVLEYCPFGDLYEcilnddfpnaKNQPEMIKDIFLQVIDGVSHMH 129
                 55555555554433..25799999*********************999998865555555555555555555555555 PP

  == domain 2  score: 13.6 bits;  conditional E-value: 1.6e-05
                 EEEE-SS-SGGGEEEC.....TTEEEEE---TT-EEEECCHHHHCCHHHCSCHCCCH CS
         APH 166 tvllHgDlhpgNllvd...pddgrvtGviDfedaglgpplyDlavllrswtseldpe 219
                  ++ H+Dl+p N+l+    ++++ v+ + Df++a+   + +D ++  ++++ +++ e
  EPX74530.1 131 LGIYHRDLKPENFLLSlsdDGNDLVVKISDFGLACRDTISHDYGTGSDRYMAPEQFE 187
                 6789*************988888888899**************99986677665544 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.29
                 --TT-EEEECCHHHHC CS
         APH 192 DfedaglgpplyDlav 207
                 D +d+g++p+++D++ 
  EPX74530.1 188 DVDDMGYSPRAADIWA 203
                 779***********85 PP

  == domain 4  score: -1.3 bits;  conditional E-value: 0.57
                 S-SGGGEEEC..TT CS
         APH 172 DlhpgNllvdpddg 185
                 D++p N+l+d  ++
  EPX74530.1 295 DFCPSNFLFD--EN 306
                 9*********..44 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   4.7e-07    0.0014     116     156 ..     110     150 ..      88     167 .. 0.73

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 4.7e-07
         Kdo 116 aeelkrallkavgrliaklhragvnHadlyaknillqqeee 156
                 + e+ + ++ +v   ++ +h++g++H+dl + n+ll   ++
  EPX74530.1 110 QPEMIKDIFLQVIDGVSHMHSLGIYHRDLKPENFLLSLSDD 150
                 44555666667788899*******************99873 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       0.6   1.8e+03      42      85 ..      34      77 ..      25      84 .. 0.67
   2 ?   12.0   0.0   3.9e-05      0.12     166     204 ..     106     144 ..      85     147 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.6
        FTA2 42 kirgkeYALKlFrfleaeeleeaeedlkiprealkelasysdpf 85
                ++++ +YA+K  r+ ++  l+e +   + +r  + ++ +++++f
  EPX74530.1 34 RYKDAKYAIKCIRKPSPIFLDEVNILREFSRYRHRNIIHFVESF 77
                56788999999888877766655555555555555555555555 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 3.9e-05
        FTA2 166 llkeqeelevsqlpkllrdlkklhklgIvvrDlkeenyi 204
                  +k+q e++ +++ ++++ +  +h+lgI++rDlk+en++
  EPX74530.1 106 NAKNQPEMIKDIFLQVIDGVSHMHSLGIYHRDLKPENFL 144
                 5789999999**************************986 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0     6e-05      0.18     147     251 ..     116     219 ..      95     228 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 6e-05
  Kinase-like 147 lllTlqlirlaanLqakglvhgkftvdnllld..ekgg...lmlggftaLvragtkvvlsevekgfaPpEllgsrggytrknktkmthkldaWqlGlv 239
                   +  lq+i  + +++++g+ h +++++n+ll    +g    +++ +f+   r+  +    +    +  pE +        +    +  + d W++G+ 
   EPX74530.1 116 DIF-LQVIDGVSHMHSLGIYHRDLKPENFLLSlsDDGNdlvVKISDFGLACRDTISHDYGTGSDRYMAPEQFEDV-----DDMGYSPRAADIWAIGIC 207
                  444.8************************9853334433338899999999998888876666666666666652.....233444467899999999 PP

  Kinase-like 240 iyriwclklPlt 251
                   + +  +  P+ 
   EPX74530.1 208 LLNLIFARNPFA 219
                  888877777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (471 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       353  (0.0196888); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.44
# Mc/sec: 3198.54
//
Query:       EPX74531.1  [L=252]
Description: cyclin L family cyclin [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-11   43.6   0.3    2.5e-09   36.9   0.5    2.6  2  Cyclin_N  Cyclin, N-terminal domain
  ------ inclusion threshold ------
      0.034   13.3   0.1       0.05   12.8   0.1    1.2  1  PM0188    Sialyltransferase PMO188


Domain annotation for each model (and alignments):
>> Cyclin_N  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.9   0.5   2.8e-13   2.5e-09      36     126 ..      33     144 ..      22     145 .. 0.90
   2 !    3.4   0.0    0.0067        60      76      94 ..     193     211 ..     190     242 .. 0.81

  Alignments for each domain:
  == domain 1  score: 36.9 bits;  conditional E-value: 2.8e-13
                 HHHHHHHHHTT--TTHHHHHHHHHHHHHHHS---CCCHHHHHHHHHHHHHHHHSSS---HHHHHHHT......................TTSS-HHHHH CS
    Cyclin_N  36 dwlvevaekfkltpetlflavnyldRflskksvpkdklqlvgatcLllAaKveeisppkledlvyit......................deafteeeil 112
                 +w+ +    ++++++++++++ ++ R+++    +  +l+   ++cL+l +K  e++ ++ +dl+ i                       +   t+ +i+
  EPX74531.1  33 EWIQKAGILLQISQRCVYTSLILFRRYCTLCPPRAADLNVCSMACLSLGSKATETE-VSSQDLCNIGiylkeqflnpeseyqihdvfstEMYTTKGKIN 130
                 79999************************9999999****************9996.7778888877788999999999999998887444778889** PP

                 HHHHHHHHHTTT-- CS
    Cyclin_N 113 emErliLetLnfdl 126
                 +mE++iL+++nfd 
  EPX74531.1 131 DMELEILRVINFDT 144
                 ************95 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.0067
                 HHHHHHHHHHHHHSSS--- CS
    Cyclin_N  76 vgatcLllAaKveeisppk 94 
                 ++++c+ lA++v + + p+
  EPX74531.1 193 IAVGCIALASRVLNRKLPQ 211
                 799*********8887765 PP

>> PM0188  Sialyltransferase PMO188
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   5.6e-06      0.05     263     332 ..      94     166 ..      74     179 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 5.6e-06
                 HHHHHHHHHHHHHSTTSTT---SS...-EEEEE--TT-THHHHHHHHH-SSEEE--TTS-THHHHHTT---SE CS
      PM0188 263 laqlhvdllneytqpsgdlfignn...ylllfkGhpnekelndtilsqfknlialPanipleillllGllPdk 332
                 l  + + l +++ +p++++ i +     +   kG  n+ el+ + + +f   + +P ++++  l  lGl+ dk
  EPX74531.1  94 LCNIGIYLKEQFLNPESEYQIHDVfstEMYTTKGKINDMELEILRVINFDTHTVIPHKLAIHYLQTLGLIHDK 166
                 567889999*************9943223457**************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (252 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       590  (0.0329076); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.28s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 1744.38
//
Query:       EPX74532.1  [L=245]
Description: spore wall assembly protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00016   20.8   4.8    0.00016   20.8   4.8    1.5  2  Pex24p    Integral peroxisomal membrane peroxin


Domain annotation for each model (and alignments):
>> Pex24p  Integral peroxisomal membrane peroxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   4.8   9.2e-09   0.00016     274     366 .]      30     112 ..       6     112 .. 0.73
   2 ?   -2.7   0.0      0.13   2.3e+03      98     124 ..     154     176 ..     132     212 .. 0.60

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 9.2e-09
      Pex24p 274 tsslfsserydwtdetrkalkespsgvdhledvkpPe.dWkWdekkkWrlDlepdewvkeeeekkGWvYddnk..wkepstedslsketRRRrwiR 366
                 ++sl+  ++++w d    + k+sp    ++     P+ +W+W   ++W +D++  + v   +e+ GW Y  ++   + +++  sl++++RRRrwiR
  EPX74532.1  30 EKSLLNFDPAPWVDG---NFKASPV---NIRTATCPDpSWEWAW-QRWYVDMN--GDV---DES-GWQYGFSFgfSNWNGRPISLQSFVRRRRWIR 112
                 567888899999999...6677676...78888888889***99.89*****6..555...444.66666444545556678899**********9 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.13
      Pex24p  98 nestsegptldeaskeivlnLrdlqnk 124
                  ++++e+++++     i   L++lqn+
  EPX74532.1 154 AITDAEEEEIA----TIPSLLQSLQNC 176
                 34555555555....555666666664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       526  (0.0293379); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 1716.25
//
Query:       EPX74533.1  [L=509]
Description: serine carboxypeptidase Sxa2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.7e-58  197.3   0.6    7.2e-58  197.0   0.6    1.1  1  Peptidase_S10  Serine carboxypeptidase


Domain annotation for each model (and alignments):
>> Peptidase_S10  Serine carboxypeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  197.0   0.6     4e-62   7.2e-58      10     417 ..      73     507 ..      65     509 .] 0.76

  Alignments for each domain:
  == domain 1  score: 197.0 bits;  conditional E-value: 4e-62
                    EEEEEEEECSTTTTEEEEEEEEE-SSGTTTS-EEEEE--TTTB-THHHHHHTTSSEEEETTTTSEEEE-TT-GGGCSEEEEE--STTSTT-EETTS CS
  Peptidase_S10  10 kqysGYldveeeedkslFYwfveseknpeedplvlWLnGGPGCsSldGlleElGPfrvnkdstkkleenpysWnkvanvlfldqPvGvGFSysntk 105
                    + ysGYl++e  + k++FY f  +     +d  ++WL+GGPGC+++ G++ E+GP+ ++++ +++++ np sW++ an++++dqP G+G+S  +  
     EPX74533.1  73 ELYSGYLSAE--NFKQIFYTFAPAITP--TDKFIVWLQGGPGCAGTLGFFSENGPIILDPN-HQTPQDNPNSWTRFANMMWIDQPFGTGYSQGSPL 163
                    68********..89**********994..699***************************65.6******************************997 PP

                    SGS--SHHHHHHHHHHHHHHHHHHSTCGTTSEEEEEEETTHHHHHHHHHHHHHTHCCH--SSTSEEEEEEEESE-SBHHHHHCCHHH.....HHHH CS
  Peptidase_S10 106 sdvktddeevaedlyefLkkffekfpeyksrdfyitGESYaGhyvPalakeilkknkkekkkkinLkGlligNglideaeqvnsyve.....faye 196
                    ++     + +++d+++ Lk+f++kfpe+k++++y++GESY+ +  +++a+++ ++ + +    i + Gl i+ gl+++ e  n+++       + +
     EPX74533.1 164 AS---TVSIATSDFIQTLKSFYAKFPEMKEKELYLVGESYGSVWGAYFAQALRSDPELH---AIPFGGLGIISGLLSDYETQNTITAsmwldHVNK 253
                    77...5667789*****************************************999885...9***************999999888555554445 PP

                    TTSSHHHHHHHHHHHHEET..........................HHHHHHHHHHHHHHHHHHHHHHHHHCHCEETTETTSEETTSSEE....... CS
  Peptidase_S10 197 hgliseeeyeslkkacekk..........................eeleqesekcanllekaskvavekenkglnvynileeccklkae....... 259
                    +gl+  +e +++++  + k                                                       n  n ++++  +  +       
     EPX74533.1 254 MGLYYTNESAEVSTFFAAKnqqcgyaevlermqfpaeqtpipkprV----------------------------NLTNSFSKKKRQ--Adsdsdsg 319
                    5555555555555444444444444455555555555544443330............................333333333111..01223333 PP

                    ...........................HHHCTTCCCCTTTTTCHHHHHHHHTSHHHHHHTT--.......TTSSS-.-SB-HHH.HHHCTCCC-SB CS
  Peptidase_S10 260 ...........................lkksstdaqggedpydesyvekylnkkeVrkalhvn.......asvkkw.eecndsv.feqleddisks 319
                                                  + + +   +   +++ +++yln+k+V+k lh+        +s++ + + cn +v  +  ++   + 
     EPX74533.1 320 nikeafqmitdcdtytltdfllylknhCMITYDITLDCSFNSNNDPLTTYLNRKDVQKQLHAIhvesaltSSKGIFgNGCNYDVyGDIVKNGAPSI 415
                    333333333344444444555555332222222333334566778899999999999988876565665544444535699999656666777777 PP

                    CHHHHHHHHHTT-EEEEEEETT-STT-HHHHHHHHHHTECTTECCSCCCEEEETTTCESEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHHHH CS
  Peptidase_S10 320 veeileellesglrvliynGdvDlicnvlgteawikklelsgkkefrpwevspkkengqvaGyvkeyenltfltvkgaGHmvPedkpeealqller 415
                    +ee ++el+++ ++v   +G  D+   ++g+   +++ +++g ++f++         +   G++ + +nl+f+   + GHm+P + p+   + l++
     EPX74533.1 416 LEEAIPELVQN-YKVSFLAGALDFQLLWTGSLLALQNTTWNGWQGFQEIPD-----LNSPFGFTLDERNLAFTLSNKVGHMAPSKDPSMVIDWLQK 505
                    88899999999.***************************************.....99*****************************999998887 PP

                    HH CS
  Peptidase_S10 416 fi 417
                    ++
     EPX74533.1 506 TL 507
                    65 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (509 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       536  (0.0298957); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 3472.62
//
Query:       EPX74534.1  [L=164]
Description: cytochrome c oxidase subunit IV [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      4e-53  178.5   0.0    4.8e-53  178.3   0.0    1.0  1  COX5B     Cytochrome c oxidase subunit Vb
    0.00073   19.5   0.8     0.0012   18.8   0.8    1.4  1  zf-CHCC   Zinc-finger domain


Domain annotation for each model (and alignments):
>> COX5B  Cytochrome c oxidase subunit Vb
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.3   0.0   5.4e-57   4.8e-53       5     128 ..      41     164 .]      37     164 .] 0.97

  Alignments for each domain:
  == domain 1  score: 178.3 bits;  conditional E-value: 5.4e-57
       COX5B   5 aktakklaevkgeesligpgakegtvPtdleqatGleRlellgkleGidvfdmkPldasrkGtledPilvesydderyvGctGspadshkviWlkveke 103
                 +++a++la++k+ ++ligpg++eg+vPtd+eqatGleRlell++l+G d fdmkPldasrkGtl+dPi+v+s+d +r++Gc+Gsp++sh +iW++v+++
  EPX74534.1  41 KSAAQELASAKEASDLIGPGGREGEVPTDIEQATGLERLELLAELSGQDAFDMKPLDASRKGTLNDPIIVTSLDPYRHIGCSGSPSGSHDLIWMTVNEH 139
                 5789*********************************************************************************************** PP

       COX5B 104 kvaRcaecGsvyklkllgeeedehh 128
                 k +Rc+ecGsvyklk+ g+++ +hh
  EPX74534.1 140 KPRRCPECGSVYKLKYNGDPHASHH 164
                 ******************9997765 PP

>> zf-CHCC  Zinc-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.8   1.3e-07    0.0012       3      37 .]     118     151 ..     116     151 .. 0.88

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 1.3e-07
                 EEEEEESSTTSEEEEEEEE--TTSEEEETTTTEEE CS
     zf-CHCC   3 rvaCdGgggalGHPrvyieldkkgpvdCgYCglrF 37 
                  + C G  +   H  +++++++++p +C+ Cg  +
  EPX74534.1 118 HIGCSGS-PSGSHDLIWMTVNEHKPRRCPECGSVY 151
                 6789998.6668********************876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       548  (0.030565); expected 358.6 (0.02)
Passed bias filter:                      504  (0.0281109); expected 358.6 (0.02)
Passed Vit filter:                        67  (0.00373696); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 1178.70
//
Query:       EPX74535.1  [L=540]
Description: phosphoacetylglucosamine mutase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-12   45.8   0.1      1e-11   44.8   0.1    1.6  1  PGM_PMM_IV  Phosphoglucomutase/phosphomannomutase, C-terminal
    2.3e-11   43.6   0.6      2e-06   27.6   0.0    3.6  4  PGM_PMM_I   Phosphoglucomutase/phosphomannomutase, alpha/beta
    0.00089   19.8   1.1      0.035   14.7   0.7    3.3  2  PGM_PMM_II  Phosphoglucomutase/phosphomannomutase, alpha/beta


Domain annotation for each model (and alignments):
>> PGM_PMM_IV  Phosphoglucomutase/phosphomannomutase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.8   0.1   1.7e-15     1e-11       1      73 [.     463     539 ..     463     540 .] 0.80

  Alignments for each domain:
  == domain 1  score: 44.8 bits;  conditional E-value: 1.7e-15
                 CCCCCHCC-TT....EECCCCCTTH...HCCCCCCCCGCCEEEE.EEEETTCCEEEEEEEESSHHHHHHHHHHHHHHH CS
  PGM_PMM_IV   1 linvrveekak..vvaalaallkva...sikeglkilledGrrlavRpSGTepllrvyvEaksdeelarlaeevaell 73 
                 li++ v++     +++a ++l   +   + +++l+ ++ +Gr + vRpS Te+ +rvy+Ea++++e ++la +++ell
  EPX74535.1 463 LIKCDVPDRSIytTTDAERKLITPEglqQKIDALVAKYTNGRAF-VRPSDTENAIRVYAEASTRSESEDLALRIVELL 539
                 688888887445333333333333366689**************.*****************************9987 PP

>> PGM_PMM_I  Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   0.0   4.6e-05      0.28      88     112 ..      63      87 ..      35      89 .. 0.83
   2 !   27.6   0.0   3.3e-10     2e-06      10      88 ..      99     180 ..      91     192 .. 0.85
   3 ?    0.4   0.0     0.083     5e+02      29      56 ..     263     291 ..     247     295 .. 0.74
   4 ?   -2.1   0.0      0.49   2.9e+03      50      82 ..     327     360 ..     326     384 .. 0.69

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 4.6e-05
                 HCCECEEEEE--TTS-TTCCCEEEE CS
   PGM_PMM_I  88 klkadagimitaSHnppeyngiKvy 112
                  +    g+mitaSH  p+   +K++
  EPX74535.1  63 LHSQPVGVMITASHTSPGEHVLKIV 87 
                 445789***********99999986 PP

  == domain 2  score: 27.6 bits;  conditional E-value: 3.3e-10
                 EEECCHCTBSCCHHHHHHHHHHHHCHHC....STS-EEEEEE-S-TTHHHHHHHHHHHHHCCT-CEEEEEEB-HHHHHHHHHH CS
   PGM_PMM_I  10 Rgkvgegeltpelveklgqaiaeylkae....akkkkvvvGrDtRvssrelaealaaglaanGvevillgllptPavsfairk 88 
                  g    + ++++ + +l+ ++ +++k++    +k+++v+v++DtR+ss+ l e ++a +    +  +++++l+tP +++++++
  EPX74535.1  99 EGYLD-QVVNADSADELTVCLSSIFKKSqmpaEKNAQVFVAYDTRTSSKHLVEPVMAAAKVLKARCVDYHVLSTPQLHYLVKS 180
                 55455.337888889999999999999899999***********************************************997 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.083
                 HHHHHCHHC.STS-EEEEEE-S-TTHHHH CS
   PGM_PMM_I  29 aiaeylkae.akkkkvvvGrDtRvssrel 56 
                 + ++y+ ++ +  + + v +D R+ s  +
  EPX74535.1 263 SGIDYVLNQqRPPSNISVQKDVRYVSFDA 291
                 4445555555999***********99765 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 0.49
                 -TTHHHHHHHHHHHHHCCT-CEEEEE.EB-HHHH CS
   PGM_PMM_I  50 RvssrelaealaaglaanGvevillg.llptPav 82 
                 R+ + +l+  l++ + anG+++  ++  l +P+ 
  EPX74535.1 327 RAAGLQLQVGLVQTAYANGASTSYVQkTLKIPVT 360
                 5666777778889999999999999986666553 PP

>> PGM_PMM_II  Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0       0.2   1.2e+03      13      56 ..      60     104 ..      50     141 .. 0.76
   2 !   14.7   0.7   5.9e-06     0.035       3      96 ..     198     296 ..     196     302 .. 0.57

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.2
                 HHHHHHHT-EEEEE-TT-TTHHHHHHHHHHTT-.EEEES-----T CS
  PGM_PMM_II  13 seaikksglkvvidplhGaggeilkellkelgv.dvvelnaepdp 56 
                 s+++ ++++ v+i++ h + ge + ++ + l   d+++ + + d+
  EPX74535.1  60 SAKLHSQPVGVMITASHTSPGEHVLKIVNVLSSyDTQKWEGYLDQ 104
                 467788899999999999999999999988776666666666655 PP

  == domain 2  score: 14.7 bits;  conditional E-value: 5.9e-06
                 HHHHGGGTS-HHHHHHHT-E..EEEE-TT-TTHHHHHHHHHHTT-.....EEEES-----TT-TT.SS----TT-TTTTHHHHGGGGG-SEEEEE-TTS CS
  PGM_PMM_II   3 Yiealkekvdseaikksglk..vvidplhGaggeilkellkelgv.....dvvelnaepdpdfpt.kapnpeekealkllielvkkegadlglafDgDa 93 
                 Y+++l e++  + ++++++   vv+d+++G+g+  lk+llke++      ++v  + +++ +  t + ++     + ++    ++ ++    ++fD Da
  EPX74535.1 198 YFHRLSEAFH-SLMASKHVCpsVVVDAANGVGAVKLKKLLKEINQdflqvEIVNDHTDCSSELTTtSGIDYVL--NQQRPPSNISVQKDVRYVSFDADA 293
                 7778888887.33333333224********************9996554344444444444444432222222..222222233333445567777777 PP

                 -BE CS
  PGM_PMM_II  94 DRl 96 
                 DRl
  EPX74535.1 294 DRL 296
                 777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (540 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       609  (0.0339673); expected 358.6 (0.02)
Passed bias filter:                      527  (0.0293937); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 3641.37
//
Query:       EPX74536.1  [L=224]
Description: transcription factor Atf31 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      1e-12   47.9   9.8    2.2e-12   46.9   9.8    1.5  1  bZIP_1         bZIP transcription factor
    6.3e-08   32.6   8.5    1.2e-07   31.7   8.1    1.7  2  bZIP_2         Basic region leucine zipper
  ------ inclusion threshold ------
      0.029   13.6   2.3      0.044   13.0   2.3    1.3  1  HAP1_N         HAP1 N-terminal conserved region
      0.035   14.6   6.1      0.081   13.5   6.1    1.5  1  bZIP_Maf       bZIP Maf transcription factor
       0.22   11.6   2.4       0.42   10.7   2.4    1.5  1  DUF4337        Domain of unknown function (DUF4337)
       0.96    8.9   8.0        1.5    8.3   8.0    1.5  1  ASD2           Apx/Shroom domain ASD2


Domain annotation for each model (and alignments):
>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.9   9.8   7.3e-16   2.2e-12       9      62 ..     138     191 ..     136     193 .. 0.95

  Alignments for each domain:
  == domain 1  score: 46.9 bits;  conditional E-value: 7.3e-16
                 XX--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   9 rkqkNReaArrsRqRKqaeieeLerrvkaLekeNksLkseleelkkevekLksk 62 
                 +k++NReaA ++R RK++ i+ L++r k  ++eNksL +e+++l++e+  L++ 
  EPX74536.1 138 KKARNREAAHKCRIRKKKHIDDLQKRTKHYTTENKSLLKEANNLREEIVRLRML 191
                 89**********************************************999986 PP

>> bZIP_2  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.7   8.1   4.1e-11   1.2e-07       8      54 .]     138     184 ..     135     184 .. 0.92
   2 ?    2.2   0.4     0.067     2e+02      30      45 ..     174     189 ..     172     192 .. 0.82

  Alignments for each domain:
  == domain 1  score: 31.7 bits;  conditional E-value: 4.1e-11
                 XXXXXXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_2   8 rRrkNreAarrsRekkkakeeeleervkeLeeeNaqLrqkveqLeke 54 
                 ++ +NreAa ++R +kk++  +l++r k+ ++eN  L+++  +L+ e
  EPX74536.1 138 KKARNREAAHKCRIRKKKHIDDLQKRTKHYTTENKSLLKEANNLREE 184
                 555***********************************999888765 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.067
                 HHHHHHHHHHHHHHHH CS
      bZIP_2  30 leervkeLeeeNaqLr 45 
                 l +++++L+ee+ +Lr
  EPX74536.1 174 LLKEANNLREEIVRLR 189
                 6789999999999998 PP

>> HAP1_N  HAP1 N-terminal conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   2.3   1.5e-05     0.044     139     193 ..     131     185 ..     106     190 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.5e-05
      HAP1_N 139 eseeeseeseelreeesleslqklvqldlLqeklreLeeeNekLreeasqLktet 193
                  +e  s+++ + re  ++   +k  ++d Lq++ ++   eN++L +ea++L++e 
  EPX74536.1 131 TEEFPSNKKARNREAAHKCRIRKKKHIDDLQKRTKHYTTENKSLLKEANNLREEI 185
                 3344444555556666667778889**************************8885 PP

>> bZIP_Maf  bZIP Maf transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   6.1   2.7e-05     0.081      36      80 ..     140     184 ..     137     191 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 2.7e-05
    bZIP_Maf  36 lKNrgyakscrkrrlqqkeelekekeeleeelerlqqelsrlrqe 80 
                  +Nr +a +cr r+ +  ++l+k  +   +e+++l +e + lr+e
  EPX74536.1 140 ARNREAAHKCRIRKKKHIDDLQKRTKHYTTENKSLLKEANNLREE 184
                 68*********************************9999999987 PP

>> DUF4337  Domain of unknown function (DUF4337)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   2.4   0.00014      0.42      67     107 ..     141     185 ..     111     190 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00014
     DUF4337  67 k....aeelaaavdkkiakykkkiarykkekkeikkkAkeleaer 107
                 +    a + + + +k+i++++k++++y++e k + k+A++l +e 
  EPX74536.1 141 RnreaAHKCRIRKKKHIDDLQKRTKHYTTENKSLLKEANNLREEI 185
                 2233366667788999***********************998875 PP

>> ASD2  Apx/Shroom domain ASD2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   8.0    0.0005       1.5      59     155 ..      91     189 ..       5     199 .. 0.65

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0005
        ASD2  59 kkeeeekseasslesssayystsaakaelltklkd.eteleekdeeeek.seeeedldlkekkeeLieslskklevLkeeqealleeikanealgeeve 155
                 +++ + +++ s  ++ss++   s++++ ++t +k+ + +++e+  +++k +++e  ++ + +k++ i+ l+k+ +  ++e ++ll+e+++ ++   ++ 
  EPX74536.1  91 DSNFSPPNSPSARSDSSTSERFSRETSYFETPAKKsMGKQTEEFPSNKKaRNREAAHKCRIRKKKHIDDLQKRTKHYTTENKSLLKEANNLREEIVRLR 189
                 222222333333344444444444444444422220222222222222224555557777777778*********************998776655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1504  (0.0838864); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 1649.74
//
Query:       EPX74537.1  [L=804]
Description: ATP-dependent DNA helicase Rdh54 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.2e-51  174.7   0.7    3.5e-51  174.0   0.7    1.2  1  SNF2_N          SNF2 family N-terminal domain
    1.4e-13   51.1   0.0    3.8e-13   49.7   0.0    1.8  1  Helicase_C      Helicase conserved C-terminal domain
    2.7e-12   47.0   0.1    9.1e-12   45.3   0.0    2.0  2  ResIII          Type III restriction enzyme, res subunit
    2.8e-06   27.2   0.0    6.7e-06   26.0   0.0    1.6  1  DEAD            DEAD/DEAH box helicase
  ------ inclusion threshold ------
      0.013   14.7   0.4       0.03   13.5   0.4    1.7  1  HDA2-3          Class II histone deacetylase complex subunits
      0.024   15.0   1.9        0.1   12.9   0.1    2.9  2  DUF2439         Protein of unknown function (DUF2439)
       0.17   11.9   0.0       0.59   10.2   0.0    1.8  2  Phenol_hyd_sub  Phenol hydroxylase subunit


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  174.0   0.7   1.4e-54   3.5e-51      56     346 ..     227     500 ..     215     516 .. 0.83

  Alignments for each domain:
  == domain 1  score: 174.0 bits;  conditional E-value: 1.4e-54
                 --EEE---TTS--HHHHHHHHH...HHTTTS---.......S-EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH-----------------EEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  56 rGGiLaDemGLGKTvqvlalilaqrakeekdkekkrkdtlagptLivvPaslldqWeneierhvsssalrvlvyggqkkmkkkntkvapklladydvvi 154
                 r  iLaDemGLGKT+q++++i+++ +++ + +    +++  + +++v P +ll++W +e+ +++ + ++ v++ ++q       ++      ++y v+i
  EPX74537.1 227 RCAILADEMGLGKTLQTITVIWTLLKQNYQAS----QNNTIKNVMVVTPVTLLQNWHDEFYKWLGRERIYVCMAKSQA------DFEEFFRNRNYSVLI 315
                 678*******************6665444444....45677789***********************99777777753......4556667899***** PP

                 E-HHHHHHHT......TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHHHHHHH-TTTT--HHHHHHHTHHHHH... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx... RF
      SNF2_N 155 ttYdvlsreaelqkkrsvlkqvewkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledlygLlkfLreepfgekqtfdkllqrpie... 250
                 ++Y++    +    +r++    +++ +v+DE+h+lk+ +s+a  ++ kL+ +++++ltGTP+qn+l ++y++++fL ++ fg+  +f++++++pi    
  EPX74537.1 316 IGYEMAC--C---CIRKTTLPGKIDLLVCDEAHRLKSMQSQAWIVLHKLKIERKLLLTGTPMQNDLMEFYSMVNFLIPGLFGSVSSFKNQFEKPIVrsr 409
                 *****99..4...4677777889**************************************************************************** PP

                 .........HHHHHHHHHHHTT-STTEE---GGGT--S---EEEEEEEEE--HHHHHHHH....................HHHHHH-HHH-HHHHHHHH CS
                 .........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 251 .........aqaekgrsrLlqllqrlmlrrakkdveknlPpkteeiiflklskverksYnrllevlrkkalakllkrseaalkssskskekilelllel 340
                          +   ++ srLl+  + ++lrr  + + k lPp++  + f++ ++ +++sY+++l+   +   +  +k              k l +l  l
  EPX74537.1 410 amfatqrdqELGSARLSRLLEYTKDFILRRKTSVLAKHLPPRHDITFFISPTACQKRSYKEALKNYKN-YSQEEKKG-------------KHLVTLSTL 494
                 *****98887888888888888899***********************************44433222.22222222.............234445555 PP

                 HHHHH- CS
                 xxxxxx RF
      SNF2_N 341 rqacnh 346
                  q+cn+
  EPX74537.1 495 SQICNS 500
                 555544 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.7   0.0   1.5e-16   3.8e-13       4     111 .]     525     637 ..     522     637 .. 0.83

  Alignments for each domain:
  == domain 1  score: 49.7 bits;  conditional E-value: 1.5e-16
                 HHHHHHH.HHTTTTSEEEEEESSHHHHHH.HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH....TTSSSEEEESGGGTSSSTSTTESEEEESSSSSS CS
  Helicase_C   4 eallell.kleeeggkilifvntidrlek.vklllekkgikvavlhgelpqnereeileqfn....kgesdvLiatdvaerGidipkvnlVinfdlprn 96 
                 e ++ ll  ++ ++ k++i+++++++l+   +ll  + +i +++l g++p++er   +e+fn    +++s +L+++++++ G+++++ + +i f++ +n
  EPX74537.1 525 EVIKSLLeLFSTQKAKAVIVSQFTETLKLlQRLL-LELKIPYLTLLGSTPHSERGSLVEKFNkstfDETSVLLLSSKAGGCGLNLTGGSRLILFEPSWN 622
                 455555544589999**********996644444.4447***********************55533445589************************** PP

                 HHHHHHHHTTSSSTT CS
  Helicase_C  97 vtsyiqriGRtgRag 111
                 +++  q+  R++R g
  EPX74537.1 623 PAQDLQALSRIYRTG 637
                 *************76 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.3   0.0   3.6e-15   9.1e-12       3     169 ..     202     371 ..     200     373 .. 0.81
   2 ?   -2.9   0.0       2.3   5.9e+03      68      82 ..     469     483 ..     454     502 .. 0.52

  Alignments for each domain:
  == domain 1  score: 45.3 bits;  conditional E-value: 3.6e-15
                 EE-HHHHHHHHHHT.........TTSEEEEEESTTSTHHHHHHHHHHHH-S...........-EEEEESSHHHHHHHHHHGGGGTGG.....GEEEESS CS
      ResIII   3 elreyQeeaienlleklks...krdkrglikmaTGtGKTlvaaklierllkkgkee......kflflvprkslleqtleefkkflseayke.igkkvsg 91 
                 +l+++Q e i  l + l+    k  + ++++ + G GKTl  + +i+ llk++++       k +++v   +ll+ + +ef k+l  ++    + k + 
  EPX74537.1 202 QLQPHQREGICFLYNCLTGisnKYGRCAILADEMGLGKTLQTITVIWTLLKQNYQAsqnntiKNVMVVTPVTLLQNWHDEFYKWLGRERIYvCMAKSQA 300
                 667777776654444444333266667889999******************999889*****889999999**************99976643333444 PP

                 S-B--.......-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS.TTTHHH.HHT---SEEEEEESS- CS
      ResIII  92 dkkkakekdstnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgakkswrei.lekfkeavllglTATp 169
                 d +++   ++ n ++l++ ++++   +      +++ l++++d++++DEaHrl++++s   i l k+k   +l lT+Tp
  EPX74537.1 301 DFEEF--FRNRNYSVLIIGYEMACCCI------RKTTLPGKIDLLVCDEAHRLKSMQSQAWIvLHKLKIERKLLLTGTP 371
                 44444..67899************999......899*******************97666644999999*********9 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2.3
                 HHHHHHGGGGTGG.. CS
      ResIII  68 eqtleefkkflseay 82 
                 + +l+++k++++e++
  EPX74537.1 469 KEALKNYKNYSQEEK 483
                 222333333333322 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.0   2.6e-09   6.7e-06      14     146 ..     226     358 ..     207     378 .. 0.71

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 2.6e-09
                 TCEEEEEESTTSSHHHHHHHHHHHHHHHS....TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTT.CSEEEEEHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxx RF
        DEAD  14 ggdvlvaaeTGsGKTlaflipvlqivyet....kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldng.vdivvgtpgr 107
                 g+  ++a e G GKTl  +  +   + ++     ++++ k ++v+    L ++ ++++ k++   ++ v+  +  +++ d  + ++n+ + +++   ++
  EPX74537.1 226 GRCAILADEMGLGKTLQTITVIWTLL-KQnyqaSQNNTIKNVMVVTPVTLLQNWHDEFYKWLGRERIYVC--M-AKSQADFEEFFRNRnYSVLIIGYEM 320
                 677889999*******9776666555.4458887777777777777778889999999999986444444..3.3444455555554448888888888 PP

                 HHHHH.HCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHH CS
                 xxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 108 lddll.stgklnlsqvrflVlDEadrlldqgfsdfinril 146
                     + +t      ++ +lV DEa+rl +++ + +i    
  EPX74537.1 321 ACCCIrKTTL--PGKIDLLVCDEAHRLKSMQSQAWIVLHK 358
                 8877734444..899***************8888886533 PP

>> HDA2-3  Class II histone deacetylase complex subunits 2 and 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.4   1.2e-05      0.03      86     136 ..     517     563 ..     466     600 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.2e-05
                 HHHT-HHHHHHHHHHHHHTTSS....EEEEEEE-STHHHHHHHHHHTTSSS CS
      HDA2-3  86 laetSgKFkvlndlvnliierkrksslnvlvvakskkeldLiEalllGkkl 136
                 l ++SgK++v++ l++l + +k     + ++v++   +l+L+ +lll  k+
  EPX74537.1 517 LLKSSGKLEVIKSLLELFSTQK----AKAVIVSQFTETLKLLQRLLLELKI 563
                 6799******************....9*******************97665 PP

>> DUF2439  Protein of unknown function (DUF2439)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   4.1e-05       0.1       6      78 ..      50     119 ..      47     121 .. 0.91
   2 ?   -0.7   0.1      0.72   1.8e+03      32      52 ..     656     676 ..     648     733 .. 0.59

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 4.1e-05
     DUF2439   6 vlYTsqvtkKsKkWh.DGflklhsfnkrvvLydeesklvessflknekeeleegeelelekylvqveeliseee 78 
                 +l+ + ++kK+K+W+ DG++      +  ++y+ + + ++ss ++  +++++eg+ +++    ++ve+++s+ee
  EPX74537.1  50 ILWRKITMKKHKTWEgDGYMV--CEGSNYTIYNADWSKIGSSTIR--DFSFDEGDMFRVGGKEITVENMMSKEE 119
                 7888899*******77****9..7778899***************..9********************999876 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.72
     DUF2439  32 rvvLydeesklvessflknek 52 
                 r+++ +++++ +++sfl +++
  EPX74537.1 656 RIYIRQNTKQGLSDSFLDSDE 676
                 666666666666666666331 PP

>> Phenol_hyd_sub  Phenol hydroxylase subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   0.00023      0.59      26      52 ..     102     128 ..      95     131 .. 0.94
   2 ?   -2.5   0.0       2.1   5.4e+03      33      49 ..     291     307 ..     286     312 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00023
  Phenol_hyd_sub  26 FaiGePeLavELlLpeaaFeeFCeanr 52 
                     F +G  e++vE ++ +++F++ C +nr
      EPX74537.1 102 FRVGGKEITVENMMSKEEFNSGCLSNR 128
                     889999*******************98 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 2.1
  Phenol_hyd_sub  33 LavELlLpeaaFeeFCe 49 
                     + v +   +a+FeeF +
      EPX74537.1 291 IYVCMAKSQADFEEFFR 307
                     56667778999*99965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (804 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       772  (0.0430587); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.64u 0.29s 00:00:00.93 Elapsed: 00:00:00.43
# Mc/sec: 5573.25
//
Query:       EPX74538.1  [L=544]
Description: retromer complex subunit Vps17 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-09   37.2   0.0    5.9e-09   35.9   0.0    1.7  1  PX        PX domain
    5.3e-07   29.4  10.1    9.6e-07   28.6  10.1    1.4  1  Vps5      Vps5 C terminal like
  ------ inclusion threshold ------
       0.01   15.5   0.0      0.032   13.9   0.0    1.8  1  HipN      Hsp70-interacting protein N N-terminal domain
       0.12   12.2   2.4       0.23   11.3   2.4    1.4  1  HeLo      Prion-inhibition and propagation
       0.43    9.4   8.8       0.76    8.6   8.8    1.4  1  CALCOCO1  Calcium binding and coiled-coil domain (CALCOCO1) l


Domain annotation for each model (and alignments):
>> PX  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.9   0.0   1.7e-12   5.9e-09       3     112 ..      96     206 ..      94     207 .. 0.93

  Alignments for each domain:
  == domain 1  score: 35.9 bits;  conditional E-value: 1.7e-12
                 EEEEEEEEEEEETTSSEEEEEEEEEETTS....SSEEEEEEEHHHHHHHHHHHHHHHTTSTSTSSSTSGSSSSSCTTSHHHHHHHHHHHHHHHHHHHTS CS
          PX   3 laqvsvleretsgskkhsyylyevelktg....akewtvkRrYsdFeeLhskLlrkfprvkiPplPkkvlfgsvrkkdeefiekrrkgLeeyLqrllnh 97 
                 ++++++ e e + + k+ ++ ++++ + +    +++++v+R + ++ +L +++ +++p++ iP  P+  +        ++  +   +gL+++L+ ++ +
  EPX74538.1  96 TLKIRIMEIEAK-NTKDPVVKMNIRANINgyrsKIYKNVRRTHGEINKLARYFMSTHPECLIPAVPEVFTSAG--IGGRDDMQYMVNGLQSWLNYVSAN 191
                 677888887766.9999*********9999*************************************998877..99********************** PP

                 CHHHHSHHHHHHHHS CS
          PX  98 pelrnsevlteFLev 112
                 p l  +++l+ F e+
  EPX74538.1 192 PNLLHDPELKLFVES 206
                 ************997 PP

>> Vps5  Vps5 C terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.6  10.1   2.7e-10   9.6e-07      44     228 ..     259     443 ..     249     450 .. 0.94

  Alignments for each domain:
  == domain 1  score: 28.6 bits;  conditional E-value: 2.7e-10
        Vps5  44 ykaiellvsqrkelasataelakslesLaslelskslsralsqlaeveerikellerqaeqdvltLgetideylrligsvksvfeqRvklwqkwqsaeq 142
                 ++ ++ lv++++ la +  el++s+   a++e+++++++a+s+l  + +++++++ +q+   ++t++ t+          k+++++R  l + + +a++
  EPX74538.1 259 EMKLKKLVAKKQALARSNIELGQSMIDYAAAEDHTGMASAISRLGKMLQSLSDVRLMQSTTRLVTFADTLAYASNNAFVAKEILSNRHILMRDLITAQN 357
                 5678999***************************************************************9999999999******************* PP

        Vps5 143 elskkkeqleKlekaaksqqdklqqlkkeveelerkvqeaekeFeeisetikkElerFetervedfknvvekyLesaiesqkevie 228
                 + +   +++++l+ + k ++ + +++ + +e+ +   +e++++   ++ ++ +E +++ ++  + +++++ ++ e+    ++ v+ 
  EPX74538.1 358 QTNACLSSANRLQSNPKISKARTDEALDALETSRLHEKELSQKLAYVTLNLMNESKTYKKQTSATLRESIRDFVEKEAYYERRVLA 443
                 **************************************************************************998776666655 PP

>> HipN  Hsp70-interacting protein N N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   8.8e-06     0.032       7      30 ..     180     203 ..     175     205 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 8.8e-06
        HipN   7 eLkqFVklckanPeiLhePeLaFF 30 
                  L + ++ + anP +Lh+PeL+ F
  EPX74538.1 180 GLQSWLNYVSANPNLLHDPELKLF 203
                 5889999**************966 PP

>> HeLo  Prion-inhibition and propagation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   2.4   6.4e-05      0.23      29     149 ..     302     428 ..     291     445 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 6.4e-05
                 GGGGHHHH.HHHHHHHHHHHHHHHHHHTTT......-SHH.......HHHHHHHHHHHHHHHHHHHHHHHHHHHH--CGG.......G-B--GGGS-HH CS
        HeLo  29 lgkdyell.rlkLdieqlRLlqWgeavgllspd...sdkrlddestrralvleileqiealleefeklqeryglklekqdasssslalssereksfrae 123
                 lgk  + l  ++L+   +RL+ +++++  +s++    ++ l++ ++  + +    +q +a+l+ +++lq++ +  ++++d++   l+ s+  ek+++++
  EPX74538.1 302 LGKMLQSLsDVRLMQSTTRLVTFADTLAYASNNafvAKEILSNRHILMRDLITAQNQTNACLSSANRLQSNPKISKARTDEALDALETSRLHEKELSQK 400
                 55555444279*******************99999866667766676668888999********************9999888889999999999**** PP

                 HHHHH..HHHHHH.HHHS----S----- CS
        HeLo 124 fellk.rlmrkaa.kkrqkrtslpkrlr 149
                 ++ +  +lm+++   k+q++++l++ +r
  EPX74538.1 401 LAYVTlNLMNESKtYKKQTSATLRESIR 428
                 **99966666655588999999888776 PP

>> CALCOCO1  Calcium binding and coiled-coil domain (CALCOCO1) like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   8.8   0.00021      0.76     184     314 ..     296     428 ..     247     447 .. 0.77

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00021
    CALCOCO1 184 eeelrslskelqelrns.laerdtqvlqLqdtittltqkLttAqrkeaenEallkelrslqerlaaSerkvegLkeeLssvaaqrdrtqaeLHqaRlea 281
                  + + +l k lq+l +  l + +t++ +  dt++   ++   A+    +   l+++l ++q++ +a   +++ L+++ +   a  d++   L  +Rl  
  EPX74538.1 296 ASAISRLGKMLQSLSDVrLMQSTTRLVTFADTLAYASNNAFVAKEILSNRHILMRDLITAQNQTNACLSSANRLQSNPKISKARTDEALDALETSRLHE 394
                 34567899999999886256777889999**************9999999************************************************* PP

    CALCOCO1 282 AqltlqLadasLal.rEgrarWaqeretLqqsae 314
                  +l+ +La ++L+l  E ++  +q  +tL++s+ 
  EPX74538.1 395 KELSQKLAYVTLNLmNESKTYKKQTSATLRESIR 428
                 ************9725666666677778887764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (544 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       791  (0.0441185); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 3752.24
//
Query:       EPX74539.1  [L=578]
Description: NADPH-dependent diflavin oxidoreductase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      3e-31  108.6   0.0    6.5e-31  107.5   0.0    1.6  2  Flavodoxin_1   Flavodoxin
    8.6e-30  104.0   0.0    1.1e-29  103.6   0.0    1.2  1  FAD_binding_1  FAD binding domain
    1.6e-13   51.3   0.0    3.1e-13   50.3   0.0    1.5  1  NAD_binding_1  Oxidoreductase NAD-binding domain


Domain annotation for each model (and alignments):
>> Flavodoxin_1  Flavodoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.5   0.0   1.1e-34   6.5e-31       1     143 []       8     145 ..       8     145 .. 0.95
   2 ?   -3.8   0.0       2.2   1.3e+04      92     124 ..     528     559 ..     526     565 .. 0.77

  Alignments for each domain:
  == domain 1  score: 107.5 bits;  conditional E-value: 1.1e-34
                   EEEETSSSHHHHHHHHHHHHHHHTTTEEEEEEEEGTTSCGGGGGTHSEEEEEEEEETTTBEEGGGHHHHHHHHHHHCHHGCCSTTTTEEEEEEEEEC CS
  Flavodoxin_1   1 ilYgSetGnteklAkqlaeelgehgfnadvvslsdydeslseieeealllvvtsTfgnGdppengesffqdllelkgdeledgdlsgvrfavfglGd 97 
                   +lYgSetG++e+l ++l + l + g ++  + ++++d   +++ e  l+++v+sT+g+G++p n++ +f+++l  k+       l ++++avfg+Gd
    EPX74539.1   8 VLYGSETGTAEELSERLYRNLIRLGYRVVTLPMDEFDT--QKLIEPLLCVFVCSTTGQGEMPLNMR-KFWKFLLKKRL--PMNLLDDMQYAVFGCGD 99 
                   89***********************************4..688889********************.9****999975..5568************* PP

                   TTSSSTTHHHHHHHHHHHHTTCEEESSSEEEETTSTHGHHHHHHHH CS
  Flavodoxin_1  98 sayenFcaagkkldekleelGaerllkllegdednqegqeeafrkW 143
                   ++y  +++a kkld +l +lGa+ +++ +egde++ +g e  f  W
    EPX74539.1 100 TSYVRYNWASKKLDSRLRQLGAQSFCPRGEGDEQHPQGVEGGFAFW 145
                   **********************************999999999888 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 2.2
                   EEEEECTTSSSTTHHHHHHHHHHHHTTCEEESS CS
  Flavodoxin_1  92 vfglGdsayenFcaagkkldekleelGaerllk 124
                   v  +G+s+  + +a+ +++  ++++  +e + +
    EPX74539.1 528 VCVCGSSGSMP-NAVRDAIAGIISKFAGESISE 559
                   66799999998.788888888888887777665 PP

>> FAD_binding_1  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.6   0.0   1.8e-33   1.1e-29      38     222 .]     224     406 ..     188     406 .. 0.90

  Alignments for each domain:
  == domain 1  score: 103.6 bits;  conditional E-value: 1.8e-33
                    BT----TT-EEEE-----HHHHHHHHHHHT--T..T-EEEEEESSTT..S--SSSSSEEHHHHHHHTB--SS---HHHHHHHGGG-SSHHHHHHHH CS
  FAD_binding_1  38 sglkYetGdhlgvypsNneelVeellellgldpkadevvelkaldeesaekeprleptTlrqalkyylditgppskqlleaLaefaseeeekqkLe 133
                    s + +++Gd    yp N++e V+ +l++l+ d  ad++v + +  +   +++ +++p T+++ +ky + i + p++ ++e  a+f +++  k++L 
     EPX74539.1 224 SSVSWKPGDIAVLYPWNDDESVHSFLRCLKWDSFADDLVFITSNIP-ERKNPWLPNPLTVFNFVKYVISIHSVPNRTFFEYAAHFTNDDLHKERLL 318
                    4689*****************************9888887776665.4799999****************************************** PP

                    HHHH-HHHHHTTTTT--HHHHHHHHHTT---TTS-HHHHHHHS-B---EEEEB-S-TTTTTTEEEEEEE--EE---SSS--EE-HHHHH CS
  FAD_binding_1 134 kLssdegakeykelklneartllevleefpsvklplefLlevlpqLkpRyYSiSssskvhpdevhltvvVveyetdgegrirkGvcsny 222
                      +s eg ++y + +   +rtlle l+ef sv++p+e  l  lp ++ R YSi++  + ++ +++l++++v+y+t    + r+G+cs +
     EPX74539.1 319 EFASLEGLDDYYDYVTRPRRTLLETLQEFHSVHIPFEYALDALPVIRGRQYSIANRCNQSEGKLELLIALVKYQT-ILKEPRQGICSRW 406
                    **************************************************************************8.88999******99 PP

>> NAD_binding_1  Oxidoreductase NAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.3   0.0   5.1e-17   3.1e-13       2     108 ..     438     542 ..     438     543 .. 0.84

  Alignments for each domain:
  == domain 1  score: 50.3 bits;  conditional E-value: 5.1e-17
                    EEEGGGGHHHHHHHHHHHHHCTTCSEEEEEEEESSGC.GSTTHHHHHHHHHHCTTEEEEEEEESSCTTTSSSEESSHHHHHHHHHHH....HSSTT CS
  NAD_binding_1   2 iagGtGiaPvrsvlraileeakdktkvvlvyGnrtee.dllyreeleelakklpgrlkvvavvsreeagweggkgrvqdalleells....lkkee 92 
                    +++GtG+aP+r +++++++     ++ vl++G+r+e  d l+re++e    k+ g+l+++ + sr+++++    ++vq+++ e+ +     l +e+
     EPX74539.1 438 VGPGTGVAPLRCLIQERVNL--EIKNNVLFFGCRKESmDYLLREDWEYH--KNAGNLQLYCAFSRDQEKK----VYVQHKIQEYEEMiyhtLREEG 525
                    79*****************8..56999*********99********988..6666688888889998885....9999999665555889999*** PP

                    EEEEEEC.SHHHHHHHH CS
  NAD_binding_1  93 thvyvCG.ppgMikavr 108
                     +v+vCG    M +avr
     EPX74539.1 526 GMVCVCGsSGSMPNAVR 542
                    *******5556766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (578 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       455  (0.0253779); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 4124.16
//
Query:       EPX74540.1  [L=433]
Description: actin cortical patch component Lsb4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      1e-41  141.7   0.2    1.6e-41  141.1   0.2    1.3  1  Ysc84           Las17-binding protein actin regulator
    2.3e-15   55.9   0.1    4.4e-15   55.0   0.1    1.5  1  SH3_1           SH3 domain
    1.4e-11   43.9   0.0    2.8e-11   42.9   0.0    1.5  1  SH3_2           Variant SH3 domain
    8.3e-11   41.6   0.0    1.9e-10   40.5   0.0    1.7  1  SH3_9           Variant SH3 domain


Domain annotation for each model (and alignments):
>> Ysc84  Las17-binding protein actin regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.1   0.2   3.5e-45   1.6e-41       2     127 ..      89     213 ..      88     214 .. 0.98

  Alignments for each domain:
  == domain 1  score: 141.1 bits;  conditional E-value: 3.5e-45
       Ysc84   2 gvgaGfqiGvdiydcvlvlntkealeaftkktrvslGgdlsvaaGpvgaggeaeaaaaaklkapvysysksrGlyaGvsldgtviterkdaNaafYgek 100
                 g+g+G+qiG + +d+v++ln+++a+++f++ ++++lGg+lsvaaGp+g+++ea  +a+ +++ap++sysk++Gl+aGvsl+g++++er+daN+++Y  +
  EPX74540.1  89 GMGVGAQIGSELTDFVIILNSRSAVQTFARLGSITLGGNLSVAAGPLGRNAEAGGGASVGGMAPIFSYSKTKGLFAGVSLEGSILVERRDANRSLYRGD 187
                 89***********************************************************************************************55 PP

       Ysc84 101 gvsveqILrgevpwpaaakeLlevlka 127
                  ++++++L+g+vp+paaa++L++vl++
  EPX74540.1 188 -INAKRLLTGQVPQPAAADPLYKVLNS 213
                 .***********************985 PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.0   0.1   9.9e-19   4.4e-15       1      48 []     380     427 ..     380     427 .. 0.97

  Alignments for each domain:
  == domain 1  score: 55.0 bits;  conditional E-value: 9.9e-19
                 EESSSBEXSSTTBXEBSTTEEEEEEEECSS..SEEEEEETTSTEEEEEEG CS
       SH3_1   1 iAlYDYeaeesdELsfkkGDviivleksed..gWwkgrlkgtgkeGliPs 48 
                 +AlY +++e++++LsfkkGD+i+++++se+  +Ww+gr     +eG++P+
  EPX74540.1 380 RALYTFTGEQPGDLSFKKGDIIEIIQRSEShdDWWTGRIGY--HEGIFPA 427
                 7***************************************7..8*****6 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.9   0.0   6.2e-15   2.8e-11       2      55 ..     379     431 ..     378     432 .. 0.92

  Alignments for each domain:
  == domain 1  score: 42.9 bits;  conditional E-value: 6.2e-15
                 EEESS-B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEECCCEEEEEGCGEE CS
       SH3_2   2 vraiedyvgedkseLsfkkGdvikvlslgskdsdgwwegevgGrvGlfPsslve 55 
                 vra+ +++ge ++ LsfkkGd+i ++  +s++ d+ww g+ g + G+fP ++v+
  EPX74540.1 379 VRALYTFTGEQPGDLSFKKGDIIEII-QRSESHDDWWTGRIGYHEGIFPANYVS 431
                 79999*********************.6666777******************97 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.5   0.0   4.2e-14   1.9e-10       1      48 [.     381     430 ..     381     431 .. 0.93

  Alignments for each domain:
  == domain 1  score: 40.5 bits;  conditional E-value: 4.2e-14
       SH3_9   1 AlypyepreddeLsLqrGDvitvi..eesedgWlegsltGrtGlvPanyv 48 
                 Aly ++  ++  Ls+ +GD+i +i  +es+d+W+ g+ + + G +Panyv
  EPX74540.1 381 ALYTFTGEQPGDLSFKKGDIIEIIqrSESHDDWWTGRIGYHEGIFPANYV 430
                 89**********************544478*******************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (433 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       482  (0.0268838); expected 358.6 (0.02)
Passed bias filter:                      253  (0.0141112); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 3129.23
//
Query:       EPX74541.1  [L=598]
Description: aminopeptidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.8e-45  152.8   0.0    1.6e-44  152.1   0.0    1.4  1  Peptidase_M24    Metallopeptidase family M24
    5.1e-44  150.2   0.0    4.3e-43  147.2   0.0    2.5  3  Creatinase_N_2   Creatinase/Prolidase N-terminal domain
    1.9e-20   72.7   0.1    5.5e-20   71.2   0.1    1.9  1  Peptidase_M24_C  C-terminal region of peptidase_M24
    1.3e-19   71.1   0.1    1.2e-14   55.1   0.0    2.7  3  Creatinase_N     Creatinase/Prolidase N-terminal domain
  ------ inclusion threshold ------
       0.13   12.5   0.0       0.29   11.4   0.0    1.5  1  THF_DHG_CYH      Tetrahydrofolate dehydrogenase/cyclohydrolas


Domain annotation for each model (and alignments):
>> Peptidase_M24  Metallopeptidase family M24
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.1   0.0   4.5e-48   1.6e-44       3     209 .]     311     527 ..     309     527 .. 0.90

  Alignments for each domain:
  == domain 1  score: 152.1 bits;  conditional E-value: 4.5e-48
                    HHHHHHHHHHHHHHHHHHHHT......TCBHHHHHHHHHHHHHHHTTTCEESSSSEEEEGGGGGSTTTBC...SSSB--TTEEEEEEEEEEETTEE CS
  Peptidase_M24   3 irkaariasaaleavleaikp......gvterelaaeieattlkrhgarglafppivasgenaavlhytp...ndrvlkegdlvlidagaeydgya 89 
                    ++ ++  +  al + ++++++      +++e+++a ++e +++k+ ++  l+f++i ++g n+av+hy+p   ++ v+ + +++l+d+ga+y+  +
     EPX74541.1 311 MKDCHVRDGSALVEYFAWLEEflqsggKINEYDAATKLESFRRKNDNFVNLSFETISSTGSNGAVIHYSPpatGSAVIDPSKIYLCDSGAQYKDGT 406
                    77777788889999999999844444458************999999*********************997755777******************* PP

                    EEEEEEEECSSGSHHHHHHHHHHHHHHHHHHHC-ST.TSBHHHHHHHHHHHHHHTTBCCGBSSCSEEEES..SSSSEEEEE.ESSSTT..CSSB-- CS
  Peptidase_M24  90 sDitrTvlvGkftpeqrelyeavleaqeaaikavkp.GvtlseidaaarevlesaglakffphglGHgvG..levhdegps.vsresn..dgrkle 179
                    +D+trT+++ ++t+ +r+  ++vl+++ a+i++v+p G+t+ +ida ar++l++ gl  ++ hg+GHgvG  l+vh+  p+ + + ++  +++ le
     EPX74541.1 407 TDVTRTWHFREPTEFERQSATLVLKGHIAIINLVFPkGTTGFQIDALARQHLWQWGL--DYLHGTGHGVGsfLNVHEL-PIgIGS-RDvfNTVALE 498
                    **********99998999***********************************9888..88*********999***98.*97643.22459***** PP

                    TTBEEEEEEEEEEETTTEEEEEBEEEEEES CS
  Peptidase_M24 180 eGmvftiEpgiyfapgeggvriedtvlvte 209
                    +Gmv ++Epg+y ++g +g r+e+ v+vt+
     EPX74541.1 499 PGMVTSNEPGFY-EDGHFGFRVENCVYVTK 527
                    ************.78999**********96 PP

>> Creatinase_N_2  Creatinase/Prolidase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.62   2.2e+03      22      46 ..       5      29 ..       3      33 .. 0.82
   2 ?   -2.1   0.0         1   3.6e+03      71     101 ..      58      85 ..      55     125 .. 0.70
   3 !  147.2   0.0   1.2e-46   4.3e-43       2     161 .]     154     307 ..     153     307 .. 0.94

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.62
                    HHHHHHHHHHHHHHTT-SEEEE-SH CS
  Creatinase_N_2 22 vaeKlerlrkelkkkkadalvlsal 46
                    ++++l++lr+ +k+++ + +v+ + 
      EPX74541.1  5 TTDRLSKLRALMKEREYSFYVVPSE 29
                    6899*********999998888665 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1
                     EEES.S-EEEEE-GGG-..-HHHHHHHTTEE CS
  Creatinase_N_2  71 ivtkdekatLFvdeeklteevkehleengve 101
                     ++  d +a LF+d + + ++++++l+en ++
      EPX74541.1  58 VIGLD-SAALFTDGRYF-NQASQQLDEN-CT 85 
                     55554.89999999876.5677778554.33 PP

  == domain 3  score: 147.2 bits;  conditional E-value: 1.2e-46
                     ---------EE--HHHHSS-HHHHHHHHHHHHHHTT-SEEEE-SHHHHHHHTTEE--SBTTB----EEEEEES.S-EEEEE-GGG-..-HHHHHH CS
  Creatinase_N_2   2 rParpkepvfvlpeeyaGesvaeKlerlrkelkkkkadalvlsaldeiAWllNlRGsDipynPvflsyaivtkdekatLFvdeeklteevkehle 96 
                     rP++p+e++f+++++yaG++v+eKl+ lr+++kk++ +a+v+s+lde+AWl+NlRG D+pynPvf++y ++t+d ka+++vde+klt+ev +h++
      EPX74541.1 154 RPKPPCEKLFIQELKYAGMDVSEKLKILREAMKKEDLEAFVVSMLDEVAWLYNLRGADVPYNPVFYAYSFITHD-KAYFYVDEAKLTPEVVAHVS 247
                     9**********************************************************************975.*******************5 PP

                     HTTEEEE-GGGHHHHHHHHHHHH----EEE-TTSBHHHHHHH-GGGEEE-S-HHHHHHHC--HHH CS
  Creatinase_N_2  97 engveikpyeevvsdlkalasaskkkvlldpsktsyalasalkekkvveeespiallKavKNevE 161
                      +  ei+py+ +++d++++     + v ++ +kts+ +a+++ e++v    spia++K +KN+vE
      EPX74541.1 248 -KYAEIRPYSRIFKDANECY-L--SHVGVS-TKTSWCIATSFGEATVYPIVSPIAHAKGIKNDVE 307
                     .579**********999886.3..568888.99********9999999899************99 PP

>> Peptidase_M24_C  C-terminal region of peptidase_M24
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.2   0.1   1.5e-23   5.5e-20       2      63 .]     539     598 .]     538     598 .] 0.97

  Alignments for each domain:
  == domain 1  score: 71.2 bits;  conditional E-value: 1.5e-23
                      EEEEEES------STT--GGGS-HHHHHHHHHHHHHHHHHHHHHHHHT-H.HHHHHHHT--- CS
  Peptidase_M24_C   2 fleFetlTlvPidrklIdvslLtpeEiawLnaYhakvreklsplLeeeneeleWLkraTrpl 63 
                      +++++ lT++P ++klId++lL +eE++++n+Yha+v+++lsplL+++  +++WL ++T+pl
       EPX74541.1 539 YYGLKDLTMAPHCKKLIDPTLLCKEEVEYINKYHARVYDTLSPLLSSS--AKKWLAKETSPL 598
                      899******************************************998..79********97 PP

>> Creatinase_N  Creatinase/Prolidase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.1   0.0   3.3e-18   1.2e-14       1     114 [.       8     130 ..       8     149 .. 0.89
   2 !   13.3   0.0   2.7e-05     0.097       2      76 ..     178     257 ..     177     284 .. 0.73
   3 ?   -3.6   0.0       4.7   1.7e+04      70      95 ..     315     339 ..     303     361 .. 0.68

  Alignments for each domain:
  == domain 1  score: 55.1 bits;  conditional E-value: 3.3e-18
                   HHHHHHHHHHHTT-SEEEEECC............HHHHHHHSS...-SSSEEEEEEESSCEEEEEECTTHHHHHHHH.TTSEEEEEST...HSSHHH CS
  Creatinase_N   1 Rlerlralmeekgldallvtsp............enlrYltGfatetgsrglalvvtadgalllvdalryteaaeesatveevveydd...pveala 82 
                   Rl++lralm+e+++++++v+s+            +++ +++Gf    gs+g+a+ +  d+a l++d +ry+++a ++  +e+   +++    v++++
    EPX74541.1   8 RLSKLRALMKEREYSFYVVPSEdahaseytsesdARRAFISGF---DGSAGCAV-IGLDSAALFTD-GRYFNQASQQ-LDENCTLMKQgfpGVPSWQ 98 
                   9******************************************...********.***********.**********.666666666668889**** PP

                   HHHHHHHHHT-EEEE-TTSSBHHHHHHHHHHC CS
  Creatinase_N  83 dllkellesekrvgveldaltvafyealkeal 114
                   ++++++   +++vg++++ +t+  +++l+e l
    EPX74541.1  99 TYCSQKTRVAEKVGIDSSLITFPDAKKLREML 130
                   ******9999******************9988 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 2.7e-05
                   HHHHHHHHHHTT-SEEEEECCHHHHHHHSS........-SSSEEEEEEESSCEEEEEECTTHHH..HHHHH.TTSEEEEEST CS
  Creatinase_N   2 lerlralmeekgldallvtspenlrYltGfa.....tetgsrglalvvtadgalllvdalryte..aaeesatveevveydd 76 
                   l+ lr++m++++l+a++v+  + + +l + +       +  + + + +t+d+a+++vd+   t   +a    ++ e+++y++
    EPX74541.1 178 LKILREAMKKEDLEAFVVSMLDEVAWLYNLRgadvpYNPVFYAYSF-ITHDKAYFYVDEAKLTPevVAHV-SKYAEIRPYSR 257
                   5669**************************9997744444444444.8**********765543102222.36666666655 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 4.7
                   EEEEESTHSSHHHHHHHHHHHHT-EE CS
  Creatinase_N  70 evveyddpvealadllkellesekrv 95 
                    v++ +    +++++l+e l+s++++
    EPX74541.1 315 HVRDGSA-LVEYFAWLEEFLQSGGKI 339
                   4444444.778888888888888776 PP

>> THF_DHG_CYH  Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   8.1e-05      0.29      40      70 ..      95     125 ..      86     135 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 8.1e-05
                  HHHHHHHHHHHHHHHHTT-EEEEEEE-TT-- CS
  THF_DHG_CYH  40 pasevYvrnkkkaceevGieseliklpedvs 70 
                  p+ ++Y ++k++ +e+vGi+s+li++p+  +
   EPX74541.1  95 PSWQTYCSQKTRVAEKVGIDSSLITFPDAKK 125
                  6779**********************97544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (598 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       441  (0.024597); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.58u 0.28s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 4019.76
//
Query:       EPX74542.1  [L=992]
Description: karyopherin Kap111 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     0.0022   17.7   0.0     0.0049   16.5   0.0    1.6  1  Importin_rep    Importin 13 repeat
  ------ inclusion threshold ------
      0.013   15.4   2.3      0.038   13.9   0.6    2.9  2  IBN_N           Importin-beta N-terminal domain
      0.015   15.3   0.0       0.05   13.6   0.0    2.0  1  Importin_rep_3  Importin 13 repeat


Domain annotation for each model (and alignments):
>> Importin_rep  Importin 13 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   8.2e-07    0.0049       3      39 ..     423     459 ..     422     460 .. 0.94

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 8.2e-07
  Importin_rep   3 PsdeeyssWsadeKEqFRcYRqDIsDTlmylYeiLge 39 
                   Ps+ ++ +W ++ +  F  YR+D +D l  +Y+i ge
    EPX74542.1 423 PSSTQWKEWPSNIRDAFHSYRRDLGDLLESSYSIFGE 459
                   999*****************************99876 PP

>> IBN_N  Importin-beta N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.6   6.3e-06     0.038       2      70 ..      30      90 ..      29      94 .. 0.88
   2 ?   -3.7   0.0         2   1.2e+04       8      24 ..     543     559 ..     543     572 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 6.3e-06
                HHHHHHHHCSTCHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHHHHGGSCCCHCGSXHHHHHHHHHHHHH CS
       IBN_N  2 ekqLkqlekqpgflsallqilanseselevRqlAalyLknlitkhWsdeeekqslpseekeqIrnnlln 70
                ek L++ +k++  +s  l+ l+ns+     ++++al+L+ +i+  W       sl+   ++q+ + ll+
  EPX74542.1 30 EKELQRVQKSESGWSIGLSMLQNSDVY--QQFFGALTLQMKINTQWE------SLDGISRTQLSHRLLE 90
                99********************99887..89****************......8888887777777666 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 2
                 HHCSTCHHHHHHHHHHC CS
       IBN_N   8 lekqpgflsallqilan 24 
                 l+k+p++l+  l il +
  EPX74542.1 543 LQKNPQYLNISLPILFD 559
                 68999*99999988855 PP

>> Importin_rep_3  Importin 13 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   8.4e-06      0.05       4      72 ..     857     928 ..     854     931 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 8.4e-06
  Importin_rep_3   4 PEaptvKaaclFfvefls...qceeipelkqvvqedGklLvetvLeaiggesprsllehladvLlaLnkhcf 72 
                     PE     a+ +F+ +f++   +++  +  ++ +++    L++++L + gg+++rs l  l+d+L  L  + f
      EPX74542.1 857 PERLLESASGQFLSSFITieiNSQSKEVHNNLLESIRMPLITKILLGFGGGASRSSLPLLSDILGKLKTQNF 928
                     555555688899999987433444455555666666777*************************99987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (992 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       607  (0.0338558); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.75u 0.28s 00:00:01.03 Elapsed: 00:00:00.47
# Mc/sec: 6292.71
//
Query:       EPX74543.1  [L=237]
Description: hypothetical protein SOCG_02026 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        0.1   12.2   0.0       0.16   11.5   0.0    1.2  1  PrpR_N    Propionate catabolism activator


Domain annotation for each model (and alignments):
>> PrpR_N  Propionate catabolism activator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   8.9e-06      0.16      96     150 ..      91     146 ..      73     149 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 8.9e-06
      PrpR_N  96 dieiytinseeeaeaavkelkaegvevvvG.dgvvadlAekaGlksvlltsgkesv 150
                 +iei ++++++++ ++++++++++ ++vvG  ++++ l  + +l++  l s  +sv
  EPX74543.1  91 KIEILPLQNAKSLSDVINQAANQKGKIVVGiTNISSLLSIEDNLNGASLASTLASV 146
                 799***************************88888888889999999999998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       521  (0.0290591); expected 358.6 (0.02)
Passed bias filter:                      405  (0.0225891); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1773.72
//
Query:       EPX74544.1  [L=1087]
Description: ubiquitin carboxy terminal hydrolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.8e-69  233.7   0.0    5.4e-69  233.2   0.0    1.2  1  UCH_1      Ubiquitin carboxyl-terminal hydrolase
    1.4e-26   94.0   0.0    2.5e-26   93.2   0.0    1.4  1  RNase_T    Exonuclease
     0.0019   17.8   0.0     0.0037   16.9   0.0    1.4  1  Tenui_NCP  Tenuivirus major non-capsid protein
     0.0046   16.5   0.2      0.035   13.6   0.2    2.1  1  UCH        Ubiquitin carboxyl-terminal hydrolase
     0.0072   17.2   0.2        0.5   11.3   0.1    3.7  3  WD40       WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> UCH_1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  233.2   0.0   1.5e-72   5.4e-69       1     320 []     473     789 ..     473     789 .. 0.90

  Alignments for each domain:
  == domain 1  score: 233.2 bits;  conditional E-value: 1.5e-72
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1   1 sGLEnhivnsYlNslLQvlyfipplrnlalshlakeckkehcLlcElgflfdmldkakglncqasnFlralssipeasalglileeeeetekssaisls 99 
                 +GLE++i+nsY+N++LQ+l++ip + + a+sh    c  e+cL+cElgflf ml+++ g+ncqa+nFlr++ss+p a++lg++ +e+++      +  s
  EPX74544.1 473 AGLETDITNSYCNPILQLLAYIPSFCKSAISHSLGPCGLESCLVCELGFLFAMLKESTGKNCQATNFLRCFSSSPFAQSLGIVFDEQSN----VGALDS 567
                 7**********************************************************************************998544....334569 PP

                 xxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxx. RF
       UCH_1 100 sliqsfnrflldqlekelketkkns..seeesaieqllgtkaettirclkCgsek.srksstlvldlkyP.kpsnekkeakvtfasilksslerektt. 193
                 sliq+f +f+l ++ + ++ + kn   s   + +++ +++  ++t+rc  Cg ++ + +ss+ ++dl yP ++     e+  +f+ +lk sl+   +  
  EPX74544.1 568 SLIQKFTKFILTEIIRVTEYEDKNGgsSFPLDYLSKSFSICEVQTHRCGICGITSrKCHSSMCMIDLEYPsQQ----LESIISFEWLLKLSLDHRVDLp 662
                 **************9987776665566778889999****************999788999999*****8542....45669**********9966654 PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 194 rawCekCkryqpteqrktvknlPpvLalnakleeeeelelwktknwlpleiklsldedknleeklkeerekakaekeikvYeLqsvvvhigdskesghL 292
                 ++wCe C   qp   r++v+++P+++ +n+++++ ++l+lw++++wlp+ ++l+  +d+++  + ++ +   ++++++ ++ L++v ++i+  + ++h 
  EPX74544.1 663 PSWCEYCLAHQPGLLRSNVRSIPDIFFINTQIKHHDHLKLWAREGWLPKLLYLRRVNDTVQCLSARQVSLLGNDKSSVSIFGLRGVTYEIRGVDFASHF 761
                 89*******************************9999****************999999886666666666778999**************6677**** PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 293 vslvkvaekelerdppesqWylFNDflV 320
                 v+ v+v + + ++++++sqWy+FNDflV
  EPX74544.1 762 VAAVNVTDRLTTENAEDSQWYIFNDFLV 789
                 *******99999888888********98 PP

>> RNase_T  Exonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.2   0.0   6.9e-30   2.5e-26       1     165 []     862    1035 ..     862    1035 .. 0.97

  Alignments for each domain:
  == domain 1  score: 93.2 bits;  conditional E-value: 6.9e-30
                  EEEEEEESSSTT............CTTS-EEEEEEEEEETTCC..EEEEEEEEEEEHSSHCSSSHHHHHHHHHCHHHHHTCEBHHHHHHHHHHHHHH CS
     RNase_T    1 vviDlEttglda............kekdeiieiaaisidggen..eigetfhfyvkptelakltdecteftgitqemldeapsfkevleefkellrk 83  
                  + iD E++ l+             ++k+  +++a+is+ +ge   ++ +++++yv+ +++  + d++t+f+gi++ +ld+a s+++v++ +k  ++k
  EPX74544.1  862 IGIDSEFVALQReetevrsdstksTIKPCKLSLARISVLRGEGplKGVPFIDDYVATDDD--VVDYLTKFSGIHPGDLDPALSKYNVVP-LKVAYKK 955 
                  579*********************88**********************************..***************************.******* PP

                  HTCCCETTTCEEEESSHHHHHHHHHHHHHHHHHCSEHCECHHHHHHHHHCHHHHHHHHHTTCHSSSS.TSSHHHHHHHHHHHH CS
     RNase_T   84 lallvahnaafdvgflraadkrilkkevpkrnqfldtlildkatlkelartsldklaeklgleedgr.aHrAldDaeataklf 165 
                  l+llv+ + + +vg++ ++d+ri+++ +p  +q++dt++l+  + ++++  sl++l ++l+ e ++  +H++++Da++++kl+
  EPX74544.1  956 LRLLVNAG-CKFVGHGLQKDFRIINLLLP-PEQVIDTVDLFFLSSRQRKL-SLKYLSWYLLEEDIQLtEHDSVEDALTALKLY 1035
                  *****999.*****************999.***************99998.********99999999*************997 PP

>> Tenui_NCP  Tenuivirus major non-capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0     1e-06    0.0037      72     122 ..     490     542 ..     474     577 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 1e-06
   Tenui_NCP  72 vhkhipefchsflshllggedddnali.diglffnmlqpslggwi.tknflrh 122
                 +  +ip fc+s +sh lg    + +l+ ++g++f ml+ s g    + nflr 
  EPX74544.1 490 LLAYIPSFCKSAISHSLGPCGLESCLVcELGFLFAMLKESTGKNCqATNFLRC 542
                 5678**************99888877648************976526899996 PP

>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.2   9.7e-06     0.035       2     257 .]     474     812 ..     473     812 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 9.7e-06
                 EES-SSSTHHHHHHHHHHHTSHHHHHHHHTCHHCCSSTCCCCC-.TT.TTS.TTHHHHHHHHHHHHHHSH-CCEE--HHHHHHHHHHSGGGT....SSS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxx RF
         UCH   2 GlsNlGntCymnsvlQcLfsipelrdyllsleevkkesrnkkelnesnplgkkgelakalkdlfkellkskskavsPkklkktlsklaksfs....gyk 96 
                 Gl+    ++y+n +lQ+L+ ip++ +  +s   ++             p g +  l+++l  lf+ l +s+ k+ + +++++++s++    s      +
  EPX74544.1 474 GLETDITNSYCNPILQLLAYIPSFCKSAIS---HSLG-----------PCGLESCLVCELGFLFAMLKESTGKNCQATNFLRCFSSSPFAQSlgivFDE 558
                 666666789***************977777...1222...........33334459********99999999999999999999887655343354555 PP

                 TCEHHHHHHHHHHHHHHHHCCHCCCHHHHHHCCCTTSHHHHHH-EEEEE.................................................. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.................................................. RF
         UCH  97 qqDaqEflaflLdqlhedlnrevaeekwkkhlkrndslitdlfegqlks.................................................. 145
                 q  +  + + l++++ + +  e  + + +++++  +s++ d +  +++                                                   
  EPX74544.1 559 QSNVGALDSSLIQKFTKFILTEIIRVTEYEDKNGGSSFPLDYLSKSFSIcevqthrcgicgitsrkchssmcmidleypsqqlesiisfewllklsldh 657
                 6555555555555555555555555555677777777777777666666777778899999999999999999999999999999************** PP

                 ....................EEEEEEB-SEEEEEEESEEETEE..EEE--SEEB--SEEE-G............GGBSS-BTTS-TCS-BEEEEEEEEE CS
                 ....................xxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxx............xxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH 146 ....................klklkrlPeiLiihlkRfsynss..ksKlntkvefpeeldls............sylaeekkkkteekkkYeLiavvvH 210
                                     + ++ ++P+i++i+ +    ++   +    ++   p+ l+l             +++  +++k  ++  ++ L +v + 
  EPX74544.1 658 rvdlppswceyclahqpgllRSNVRSIPDIFFINTQIKHHDHLklW---AREGWLPKLLYLRrvndtvqclsarQVSLLGNDK--SSVSIFGLRGVTYE 751
                 *********************************9984444333341...3333334333333111112111211333323333..34556999999988 PP

                 ES.CTTSEEEEEEEE........CTTTTEEEEEETTEEEEE-HHCCCTT......CEEEEEE CS
                 xx.xxxxxxxxxxxx........xxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxx RF
         UCH 211 sG.slssGHYvayik........nekngkWykydDetvkevkeeeevls......sayiLfY 257
                 +       H+va ++        n ++++Wy ++D  vk+++ee e l+       + +L Y
  EPX74544.1 752 IRgVDFASHFVAAVNvtdrltteNAEDSQWYIFNDFLVKQISEE-EALNvhgpwkIPAMLCY 812
                 65256678***955555555555777888*************98.44444556665666655 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0       0.3   1.1e+03      13      35 ..      16      43 ..       8      44 .. 0.71
   2 ?   -2.8   0.0         4   1.4e+04      22      34 ..     150     162 ..     128     164 .. 0.62
   3 !   11.3   0.1   0.00014       0.5       3      38 .]     172     215 ..     170     215 .. 0.81

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.3
                EEEEE.....EETTSSEEEEEETTSEEE CS
        WD40 13 vtsla.....fspdgawlasGsdDgtvr 35
                +t+++     f+p++ ++ sG+++g ++
  EPX74544.1 16 ITACSlntisFDPYSELIWSGHKNGQLK 43
                5555555555****99953799998876 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 4
                 SSEEEEEETTSEE CS
        WD40  22 gawlasGsdDgtv 34 
                 +++l++Gs +g +
  EPX74544.1 150 NRLLCCGSTNGEI 162
                 3347888888876 PP

  == domain 3  score: 11.3 bits;  conditional E-value: 0.00014
                 EEEEEESS.SSEEEEEEETTSSEEEEEET.........TSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsd.........DgtvriWd 38 
                 ++  +++H + ++++  + +g++l+s+++         D+ v++Wd
  EPX74544.1 172 PVNRISAHtGTISDI--DTSGNLLLSCGYslrhdsymmDPFVKVWD 215
                 66677899666****..99****999975556667888*******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1087 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       348  (0.0194099); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.73u 0.30s 00:00:01.03 Elapsed: 00:00:00.48
# Mc/sec: 6813.95
//
Query:       EPX74545.1  [L=598]
Description: krr family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-28   99.3   0.3      1e-28   99.3   0.3    4.5  5  Kri1_C    KRI1-like family C-terminal
    4.8e-26   91.3  10.1    4.8e-26   91.3  10.1    5.3  6  Kri1      KRI1-like family


Domain annotation for each model (and alignments):
>> Kri1_C  KRI1-like family C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.9       1.3   1.2e+04      65      75 ..      63      73 ..      51      82 .. 0.49
   2 ?   -0.1   0.2      0.12     1e+03      13      30 ..     320     339 ..     308     344 .. 0.61
   3 ?   -4.8   5.8         2   1.8e+04      65      87 ..     370     393 ..     359     395 .. 0.64
   4 ?   -1.0   1.3      0.24   2.1e+03      67      85 ..     489     507 ..     482     509 .. 0.62
   5 !   99.3   0.3   1.1e-32     1e-28       1      89 []     507     593 ..     507     593 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 1.3
      Kri1_C 65 dkekkkkdkkk 75
                + e+++k ++k
  EPX74545.1 63 KREERQKLEEK 73
                22233333333 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.12
      Kri1_C  13 ldledvig..dlkvrFkYre 30 
                  +++++ +  ++k++F+Y+e
  EPX74545.1 320 NQFDETADnfETKYNFRYEE 339
                 333444445689999**998 PP

  == domain 3  score: -4.8 bits;  conditional E-value: 2
      Kri1_C  65 dke.kkkkdkkklkkkkrlrewrk 87 
                 + e ++++++k++++ +rl+++++
  EPX74545.1 370 KRErQEEEKRKRVEEMNRLKNLKQ 393
                 443255666677777778877776 PP

  == domain 4  score: -1.0 bits;  conditional E-value: 0.24
      Kri1_C  67 ekkkkdkkklkkkkrlrew 85 
                 e++kk k++ +k++++++ 
  EPX74545.1 489 ESQKKAKRQSRKEAKNKKR 507
                 4566666666666666554 PP

  == domain 5  score: 99.3 bits;  conditional E-value: 1.1e-32
      Kri1_C   1 kkleelvdeyykldledvigdlkvrFkYrevspesFgLtareILladDkeLnefvglkklapYrdkekkkkdkkklkkkkrlrewrkev 89 
                 +k+ee+vde+y +     + +  ++F+Yr+v+pe+Fg+++ +IL+a+D++Ln+++glkkl pYr++e+ +kd+kk++kkkrlrew+kev
  EPX74545.1 507 RKIEEYVDEKYGVPEP--VASSGTQFRYRQVAPETFGMDVLDILNASDADLNKYIGLKKLLPYRTPEQVEKDRKKFGKKKRLREWKKEV 593
                 589*******887765..68999****************************************************************86 PP

>> Kri1  KRI1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.9  11.6         2   1.8e+04       7      87 ..       9      89 ..       2     107 .. 0.41
   2 ?   -4.1   3.0         2   1.8e+04      75      75 ..     214     214 ..     170     258 .. 0.61
   3 ?   -2.4   0.7       0.8   7.1e+03      48      48 ..     287     287 ..     224     342 .. 0.54
   4 !   91.3  10.1   5.4e-30   4.8e-26       1     102 [.     372     463 ..     372     464 .. 0.95
   5 ?    2.7   1.0     0.021   1.9e+02      12      34 ..     489     511 ..     480     529 .. 0.63
   6 ?   -3.4   2.9       1.7   1.5e+04       5      23 ..     574     592 ..     570     597 .. 0.72

  Alignments for each domain:
  == domain 1  score: -5.9 bits;  conditional E-value: 2
        Kri1  7 keekkeelkrlkklkreeieeklekikkaageeeaalkeleeeeledlldgdfDpekw.d..rkmkklFgeeyyaeedeeekkP 87
                k+++++  k + + +  e + k + i     eee+++++l   ++++ + + f+ +k  +  +k+++ +g+e  +++d++++  
  EPX74545.1  9 KKAREALAKGQEEKQLPENSGKSQLIDDNISEEEDNVDSL---KINENFAKRFEHNKKrEerQKLEEKYGKELANQNDSDDEDE 89
                2222222222233333455555555555555444444444...33333344444332211113455555555555555433322 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 2
        Kri1  75 e 75 
                 e
  EPX74545.1 214 E 214
                 1 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 0.8
        Kri1  48 e 48 
                 e
  EPX74545.1 287 E 287
                 0 PP

  == domain 4  score: 91.3 bits;  conditional E-value: 5.4e-30
        Kri1   1 erkeeekeekkeelkrlkklkreeieeklekikkaageeeaalkeleeeeledlldgdfDpekwdrkmkklFgeeyyaeedeeekkPkwdddidikdiv 99 
                 er+eeek+++ ee++rlk+lk++e+eekl++++++ag+++ +++el      dl +gdf+pe+w+++m+++F ++yy++   ++ kP+++ddid++d+v
  EPX74545.1 372 ERQEEEKRKRVEEMNRLKNLKQKELEEKLNQVAEIAGTNDIDISEL------DL-EGDFNPEEWEARMARIFSDKYYKD---DDSKPQFEDDIDVSDLV 460
                 79***********************************999999999......88.***********************7...5678************9 PP

        Kri1 100 pdd 102
                 p++
  EPX74545.1 461 PPE 463
                 976 PP

  == domain 5  score: 2.7 bits;  conditional E-value: 0.021
        Kri1  12 eelkrlkklkreeieeklekikk 34 
                 e  k+ k+  r+e+++k +ki++
  EPX74545.1 489 ESQKKAKRQSRKEAKNKKRKIEE 511
                 44444444444555555544444 PP

  == domain 6  score: -3.4 bits;  conditional E-value: 1.7
        Kri1   5 eekeekkeelkrlkklkre 23 
                 e+ ++k  ++krl++ k+e
  EPX74545.1 574 EKDRKKFGKKKRLREWKKE 592
                 5566777889999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (598 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2391  (0.133359); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        72  (0.00401584); expected 17.9 (0.001)
Passed Fwd filter:                        24  (0.00133861); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.02u 0.33s 00:00:01.35 Elapsed: 00:00:00.52
# Mc/sec: 3447.50
//
Query:       EPX74546.1  [L=2244]
Description: carbamoyl-phosphate synthase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.3e-114  380.9   0.1    2.2e-84  282.2   0.0    2.4  2  CPSase_L_D2      Carbamoyl-phosphate synthase L chain, ATP bi
    3.1e-49  166.1   0.0    8.8e-49  164.6   0.0    1.8  1  CPSase_sm_chain  Carbamoyl-phosphate synthase small chain, CP
    5.9e-46  156.6   0.0    1.3e-45  155.5   0.0    1.6  1  GATase           Glutamine amidotransferase class-I
    8.5e-43  145.9   0.0    2.3e-42  144.5   0.0    1.8  1  OTCace_N         Aspartate/ornithine carbamoyltransferase, ca
      8e-39  132.8   0.1    1.7e-38  131.7   0.1    1.6  1  CPSase_L_D3      Carbamoyl-phosphate synthetase large chain, 
    2.8e-33  115.2   0.0    1.4e-32  113.0   0.0    2.2  2  OTCace           Aspartate/ornithine carbamoyltransferase, As
    1.1e-19   70.8   0.8    1.4e-10   41.0   0.2    2.5  2  Dala_Dala_lig_C  D-ala D-ala ligase C-terminus
    2.4e-19   69.3   0.0    1.1e-18   67.2   0.0    2.2  1  MGS              MGS-like domain
      1e-15   57.8   0.1    3.1e-09   36.6   0.0    2.6  2  ATP-grasp        ATP-grasp domain
    4.5e-10   39.4   0.3    2.6e-05   24.0   0.0    3.1  3  ATPgrasp_Ter     ATP-grasp in the biosynthetic pathway with T
    3.5e-06   27.2   0.3      0.011   15.7   0.1    2.7  2  ATP-grasp_3      ATP-grasp domain
    1.4e-05   24.9   0.0       0.15   11.9   0.0    5.1  5  DJ-1_PfpI        DJ-1/PfpI family
    0.00017   21.4   3.1      0.014   15.2   0.0    3.4  3  Peptidase_C26    Peptidase C26
      0.002   18.0   0.5       0.53   10.0   0.0    3.2  4  GARS_A           Phosphoribosylglycinamide synthetase, ATP-gr
  ------ inclusion threshold ------
      0.042   13.4   0.0        2.5    7.7   0.0    2.4  2  RimK             RimK-like ATP-grasp domain


Domain annotation for each model (and alignments):
>> CPSase_L_D2  Carbamoyl-phosphate synthase L chain, ATP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  282.2   0.0   1.8e-87   2.2e-84       1     210 [.     593     796 ..     593     797 .. 0.99
   2 !   96.4   0.0   1.3e-30   1.6e-27       2     207 ..    1129    1327 ..    1128    1330 .. 0.91

  Alignments for each domain:
  == domain 1  score: 282.2 bits;  conditional E-value: 1.8e-87
                  SHHHHHHHHHHTT-BBSSEECSSBSSHHHHHHHHHHH-SSEEEEETTCCTTTTEEEESSHHHHHHHHHHHHHHHHHHHSTS-EEEEE--SSSEEEEEE CS
  CPSase_L_D2   1 DkesakealkkinvpvvpssaapvetleealaiakeigyPviikaafglGGkGmrvarneeelaelvkkalaeakaafgnkqvlvekslkgpkeiEve 98 
                  D+e++++a+++i++++++s++a  ++leeal+++k+i++Pvi++aa++lGG+G+++a+neeel++l+++a+a++      +qvl+e+s+kg+keiE+e
   EPX74546.1 593 DREKFARAMDEIDEKCAKSASA--SSLEEALKVSKDISFPVIVRAAYALGGLGSGFADNEEELIDLCNRAFATS------PQVLIERSMKGWKEIEYE 682
                  9*********************..**************************************************......8***************** PP

                  EEEETTS-EEEEEEEEECCEC..TCCCCEEEES-SS--HHHHHHHHHHHHHHHHHHT-EEEEEEEEEEETTTTEEEEEEEESS--CCHHHHHHHHS-- CS
  CPSase_L_D2  99 vlrDakgnvitvcerenslql..rtqkvievAPsqtLtdeerqalreaavkvvrevgvvgagtveflldpkskeyyviEvNtRlsvesalaekaTGld 194
                  v+rDa +n+itvc++en+++l  +t+++i+vAPsqtLtde++++lr++av+v+r++gvvg+++++++l+p++key++iEvN+Rls++sala+kaTG++
   EPX74546.1 683 VVRDAFDNCITVCNMENFDPLgiHTGDSIVVAPSQTLTDEDYNMLRTTAVNVIRHLGVVGECNIQYALNPFTKEYCIIEVNARLSRSSALASKATGYP 780
                  ************************************************************************************************** PP

                  HHHHHHHHHTT--GCG CS
  CPSase_L_D2 195 lvkeaakialgekLee 210
                  l+++aak++l+++L+e
   EPX74546.1 781 LAFTAAKLGLNIPLNE 796
                  **************97 PP

  == domain 2  score: 96.4 bits;  conditional E-value: 1.3e-30
                   HHHHHHHHHHTT-BBSSEECSSBSSHHHHHHHHHHH-SSEEEEETTCCTTTTEEEESSHHHHHHHHHHHHHHHHHHHSTS-EEEEE--SSSEEEEE CS
  CPSase_L_D2    2 kesakealkkinvpvvpssaapvetleealaiakeigyPviikaafglGGkGmrvarneeelaelvkkalaeakaafgnkqvlvekslkgpkeiEv 97  
                   + +++++l++i+v+  + ++   ++ eea ++ ++++yPv++++++ l G  m  ++++ +l++ +k+a+a  k    ++ v + k++++ keiE+
   EPX74546.1 1129 RFKFSRMLDDIGVDQPKWKEL--TSFEEAEEFCERVSYPVLVRPSYVLSGAAMNTVYSKTDLQNYLKQAVAINK----DHPVVISKYIENAKEIEL 1218
                   567888899999998888888..99***********************************************96....9***************** PP

                   EEEEETTS-EEEEEEEEECCEC.TCCCCEEEES-SS--HHHHHHHHHHHHHHHHHHT-EEEEEEEEEEETTTTEEEEEEEESS--CCHHHHHHHHS CS
  CPSase_L_D2   98 evlrDakgnvitvcerenslql.rtqkvievAPsqtLtdeerqalreaavkvvrevgvvgagtveflldpkskeyyviEvNtRlsvesalaekaTG 192 
                   + ++     v++v +     +  + ++   v P q L++++ +++  aa+k+ ++++v+g  +++f+ +  ++e+ viE N R s++ +  +k+ G
   EPX74546.1 1219 DAVARDGRMVMHVISEHVENAGvHSGDATLVLPPQDLDPATISRIVDAAAKIGEALNVTGPYNIQFIAK--DNEIKVIECNVRASRSFPFVSKVMG 1312
                   98887666677776655444435********************************************99..69*********************** PP

                   --HHHHHHHHHTT-- CS
  CPSase_L_D2  193 ldlvkeaakialgek 207 
                    dl+ +a  + +g +
   EPX74546.1 1313 ADLISMATEVIMGFP 1327
                   *******99988866 PP

>> CPSase_sm_chain  Carbamoyl-phosphate synthase small chain, CPSase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.6   0.0   7.4e-52   8.8e-49       3     127 ..      60     196 ..      58     197 .. 0.94

  Alignments for each domain:
  == domain 1  score: 164.6 bits;  conditional E-value: 7.4e-52
  CPSase_sm_chain   3 vLvLedGtvfeGksfg.akeavGEvvfnTgmtGYqeiltDpsYagqilvltypliGnyGvneedves...........ekikvaglvvrelsee 84 
                      +L Led +v++G+sfg +k+++GE+vf+Tgm+GY+e+ltDpsY+gqilv+t+p iGnyGv ++++e+           ++i++++++++++s++
       EPX74546.1  60 ALELEDHSVLQGYSFGyDKSVSGELVFQTGMVGYPESLTDPSYRGQILVFTFPNIGNYGVPDRNIEDaikgipkyfesNEIHASAIIISSYSQN 153
                      699*************77999***************************************77777777778888887799************** PP

  CPSase_sm_chain  85 psnwraeesLsewlkeekipgisgvDTRaLtkklrekgamkgv 127
                      +s++ a++sL +wlke++ipgi g+DTRaLtkk+r++g+m+g+
       EPX74546.1 154 YSHFLAHSSLGDWLKEQGIPGIFGIDTRALTKKIRKQGSMLGR 196
                      ****************************************997 PP

>> GATase  Glutamine amidotransferase class-I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  155.5   0.0   1.1e-48   1.3e-45       3     189 ..     268     441 ..     266     442 .. 0.96

  Alignments for each domain:
  == domain 1  score: 155.5 bits;  conditional E-value: 1.1e-48
                 EESSTSTHHHHHHHHHHTT-EEEEEETTSHHHHHHHTHHSTSEEEEEEESSCTT.TTTHHHHHHHHCT.STS-EEEETHHHHHHHHHTTTEEEEEECEE CS
      GATase   3 iDnydsvtenlvhalvelgvkvevvpidasaeeilellknpdgilvsgGpgspg.vegkieaikeare.nkiPiLGICLGmQllaiefgrkvvkekeke 99 
                 +D++  +++n ++++v +gv++ vvp+d++++++     n+dg+++s+Gpg+p+ ++ ++e +++++e + iP++GIC+G+Q+la + g+++vk+k ++
  EPX74546.1 268 VDVG--MKYNQIRCFVTRGVELLVVPWDYDFSKE-----NYDGLFISNGPGDPSlMDLTVERVRRVIEsKTIPVFGICFGHQILARAAGASTVKMK-FG 358
                 6777..9**********************99998.....8****************************889*************************.** PP

                 EEEEEEEEEETTTCGGTTTTSEEEEEEEEEEEEESGCHHHTTEEEEEEEETTEEEEEEEEETTTEEEESSBTTSTTSTTHHHHHHHHHHH CS
      GATase 100 hhggtmrlgddetallyglknevierhrHryevnpkelepaglevtakseddeelmeiiekknpfvgvQFHPEststpegpellfnflik 189
                 ++g++++++         +++++i++++H+y+vn  +++p+g++ + ++++d+++++i + ++pf++vQFHPEst++p+++e+lf+ +i+
  EPX74546.1 359 NRGHNIPCTC------LVSGRCYITSQNHGYAVNA-DTLPSGWKELYVNANDGSNEGIYNTEYPFFSVQFHPESTPGPRDTEFLFDVFID 441
                 **********......44457*************8.**************************************************9986 PP

>> OTCace_N  Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.5   0.0   1.9e-45   2.3e-42       1     148 []    1937    2078 ..    1937    2078 .. 0.97

  Alignments for each domain:
  == domain 1  score: 144.5 bits;  conditional E-value: 1.9e-45
                  S-BSSGGGS-HHHHHHHHHHHHHHHHHHHTTT-STTTTT-EEEEEESS--HHHHHHHHHHHHHTTSEEEEEESTTTSCTTTGGSTTSSCHHHHHHHH CS
    OTCace_N    1 rhllsledlskeeieelldlaaelkekvkkekkekllkgktlallFeepStRTrvSfevAakrlGgkvlslseaediqlssvskgrkEsleDtarvl 97  
                  +h++s++++++++++ l+  a++++  v+++   +l+ gk+l+++F+e+StRT++Sf++A++rlGgkv+ ++++     ssv+kg  Esl+Dt+r+l
  EPX74546.1 1937 KHIISVHQVTRSDLHLLFAIAHQMRIIVERQGVIDLCYGKILCTMFFESSTRTSSSFDAAMQRLGGKVVAVTAS----ASSVNKG--ESLADTIRTL 2027
                  7***********************************************************************66....799****..********** PP

                  HHHTSEEEEEESSHHHHHHHHHHHSSEEEEEEETSSB-HHHHHHHHHHHHH CS
    OTCace_N   98 sryvdaiviRhpgaeeleelakyasvpviNagdgdgeHPtQaLaDlltire 148 
                  ++y+da+v+Rhp+ e+++  a ++ vp+iN+g+g++eHPtQa++Dl+tire
  EPX74546.1 2028 GCYGDAVVLRHPSVESARIAATFSPVPIINGGNGSKEHPTQAFLDLYTIRE 2078
                  ************88889999999**************************98 PP

>> CPSase_L_D3  Carbamoyl-phosphate synthetase large chain, oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.7   0.1   1.4e-41   1.7e-38       1     122 []     881    1002 ..     881    1002 .. 0.97

  Alignments for each domain:
  == domain 1  score: 131.7 bits;  conditional E-value: 1.4e-41
  CPSase_L_D3    1 eelkeptdeRifaiaealrrglsveeiheltkidpwFLekleelvelekelkkkkk.eldeellreakklGfsDkqiaelleeeeeeevrelrkkl 95  
                   +el++p+d+R+faia+a+++g++ve+i +lt+id+wFLekl  l++++ke++k++  +l+  llr+ak+lGf D qia++++ ++e +vr++r+++
   EPX74546.1  881 QELQTPSDQRLFAIANAMNSGYTVERIWKLTSIDRWFLEKLMGLIRMAKEISKYDIsTLPVPLLRTAKQLGFADVQIASFMN-SNELAVRRIRTEA 975 
                   589**************************************************99899*********************966.88999******** PP

  CPSase_L_D3   96 gilpvykrvDtcAaeFeaetpYlYstY 122 
                   gi+  +k++Dt+AaeF+a t+YlY+tY
   EPX74546.1  976 GIRTFVKQIDTVAAEFPAFTNYLYTTY 1002
                   **************************9 PP

>> OTCace  Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       3.1   3.7e+03       2      70 ..     552     622 ..     551     627 .. 0.74
   2 !  113.0   0.0   1.1e-35   1.4e-32       2     155 ..    2085    2234 ..    2084    2236 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 3.1
                 C.EEEEESSTTSHHHHHHHHHHHHCT-EEEEES-TT..SSH-HHHHHHHHHHHHHHT-EEEEESSCHHHHT CS
      OTCace   2 glkiafvGdkknnvanslikllarlgmdvvlvaPkg..lepdkevleeakknakksggsititedleeavk 70 
                 g+ ++f G    nv   l   +  lg++v   + ++  + +d e +++a ++++++ ++    ++leea+k
  EPX74546.1 552 GIYVTFGGQTALNVGIELKDEFESLGVKVLGTSVDTiiTTEDREKFARAMDEIDEKCAKSASASSLEEALK 622
                 66777777777888888888888888888888888877677778888888888888777666677777776 PP

  == domain 2  score: 113.0 bits;  conditional E-value: 1.1e-35
                  C.EEEEESS.TTSHHHHHHHHHHHHCT-EEEEES-TTSSH-HHHHHHHHHHHHHHT.-EEEEESSCHHHHTT-SEEEE--SSETTCCGGHH...HHH CS
      OTCace    2 glkiafvGd.kknnvanslikllarlgmdvvlvaPkglepdkevleeakknakksg.gsititedleeavkgaDvvytdvwvsmgeekere...erl 93  
                  gl+i+fvGd k++++++sl++lla  +++++lv+P++l+   +v    k++  +sg + ++  e  +++v++ Dv+y ++++     ker+   e++
  EPX74546.1 2085 GLTITFVGDlKYGRTVHSLARLLAFWQVELHLVSPEQLQLPDDV----KEDLRASGlNFVEHRELSKDVVAQSDVLYCTRVQ-----KERFssiEEY 2172
                  89***********************************9995554....566666784555555666799*************.....66666669** PP

                  HHHCC.CSB-HHHHHHS-TT-EEEE-S---BTTTB-HHH.HTSTTBHHHHHHHHHHHHHHHHHH CS
      OTCace   94 kklkd.yqvteellklakkdaivlHcLPakrgeEvtdeV.fdsprsvvfeqaeNrlhtikAllv 155 
                  ++lkd + v+++ll +ak++ iv+H+LP  r++E+++eV fd++r+++f+q++++l++++All+
  EPX74546.1 2173 EELKDsFIVDNNLLTAAKPHTIVMHPLP--RNREISEEVdFDQKRAAYFRQMRYGLYIRMALLA 2234
                  ****************************..*********557788*****************98 PP

>> Dala_Dala_lig_C  D-ala D-ala ligase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.5   0.0   1.6e-09     2e-06      26     174 ..     618     764 ..     605     766 .. 0.85
   2 !   41.0   0.2   1.2e-13   1.4e-10      15     173 ..    1141    1297 ..    1135    1300 .. 0.86

  Alignments for each domain:
  == domain 1  score: 27.5 bits;  conditional E-value: 1.6e-09
                      HHHHHHHHHC-SSEEEEESSSSTTTTEEEESSGGGHHHHHHHHHTT-SCEEEEE--.ESEEEEEEEEETSSCEEEEEEEEE-SSSSS-HHHHHC CS
  Dala_Dala_lig_C  26 ellekveeelgypvfVKpareGSSvGvskveseeelkeaieeafkydekvlvEeai.egreievavlgneklevsevgeivvkkgfydyeakys 118
                      e   kv + +++pv+V++a +   +G   + +eeel +  ++af    +vl+E+ +   +eie  v+ +   ++ +v     + + +d    ++
       EPX74546.1 618 EEALKVSKDISFPVIVRAAYALGGLGSGFADNEEELIDLCNRAFATSPQVLIERSMkGWKEIEYEVVRDAFDNCITV----CNMENFDPLGIHT 707
                      55678999*************99*********************************6679********444444443....3344566666677 PP

                      .TT-EEESS----HHHHHHHHHHHHHHHHHTT--SEEEEEEEE.ETTTEEEEEEEES CS
  Dala_Dala_lig_C 119 ddkaqlevpaklekeveekiqelalkaykaldlrGlaRvDffl.teegeivlnEvNt 174
                      +d++ +    +l++e ++ ++++a+++ + l++ G + + + l   + e  + EvN 
       EPX74546.1 708 GDSIVVAPSQTLTDEDYNMLRTTAVNVIRHLGVVGECNIQYALnPFTKEYCIIEVNA 764
                      89999999999******************************9966688999999995 PP

  == domain 2  score: 41.0 bits;  conditional E-value: 1.2e-13
                       EETTHHCH-H-.HHHHHHHHHC-SSEEEEESSSSTTTTEEEESSGGGHHHHHHHHH..TT-SCEEEEE--.ESEEEEE.EEEETSSCEEEEE CS
  Dala_Dala_lig_C   15 lekeeakeekk.ellekveeelgypvfVKpareGSSvGvskveseeelkeaieeaf..kydekvlvEeai.egreiev.avlgneklevsev 101 
                       +++ ++ke ++ e  e+ +e+++ypv+V+p+   S   ++ v s+ +l++++++a+  ++d+ v++ ++i +++eie  av  ++++ ++++
       EPX74546.1 1141 VDQPKWKELTSfEEAEEFCERVSYPVLVRPSYVLSGAAMNTVYSKTDLQNYLKQAVaiNKDHPVVISKYIeNAKEIELdAVARDGRMVMHVI 1232
                       455555555444667788***********************************975227899********99*****956777999999999 PP

                       EEEE-SSSSS-HHHHHC.TT-EEESS----HHHHHHHHHHHHHHHHHTT--SEEEEEEEEETTTEEEEEEEE CS
  Dala_Dala_lig_C  102 geivvkkgfydyeakysddkaqlevpaklekeveekiqelalkaykaldlrGlaRvDfflteegeivlnEvN 173 
                        e+v + g+       s+d++ +  p +l++++ ++i ++a k+ +al+++G   + f+ + ++ei + E N
       EPX74546.1 1233 SEHVENAGVH------SGDATLVLPPQDLDPATISRIVDAAAKIGEALNVTGPYNIQFIAK-DNEIKVIECN 1297
                       9999999986......567788999*******************************99876.9999999998 PP

>> MGS  MGS-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.2   0.0   8.8e-22   1.1e-18       1      95 []    1409    1505 ..    1409    1505 .. 0.95

  Alignments for each domain:
  == domain 1  score: 67.2 bits;  conditional E-value: 8.8e-22
                  THHHHHHHHHHTTCEEEEEHHHHHHHHHTT--EEECCCCHSTGSGGTHCHHHHHHHHTTSCCEEEEE--THHHHHH....CHHHHHHHHHHHTTSHE CS
         MGS    1 glvelakklkelgfellATgGTakllkeagipvtevvektgegerlggrveildaikngeidlvintlypfkatva....kdgykirraaenidIpl 93  
                  +l++ +++l+++g++++AT GT ++l e+g+p++ ++++  e+  ++ + ++ ++++n+ id++in++++++ ++     ++gyk rr+a+++++pl
  EPX74546.1 1409 ELLPYVRRLHNAGYNIFATAGTSDYLMESGVPCKYLADIPAEE-ANN-DFSLSAHLANNMIDMYINLPSNNRYRRPanyiSSGYKSRRLAIDYSVPL 1503
                  5899*************************************99.444.7*************************999******************** PP

                  ES CS
         MGS   94 pt 95  
                  +t
  EPX74546.1 1504 VT 1505
                  98 PP

>> ATP-grasp  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0     1e-06    0.0012       8     138 ..     608     743 ..     601     765 .. 0.86
   2 !   36.6   0.0   2.6e-12   3.1e-09       3     159 ..    1138    1299 ..    1136    1303 .. 0.88

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 1e-06
                 B-EEEEECCHHHHHHHHHHH-SCEEEEESSS-CTTTTEEEECTCCGHHCHHHHC..GTTCEEEEE----SEEEEEEEEEETTC-EEE--EEEEEEETTE CS
   ATP-grasp   8 vprflaveskeeleeaaeelglpvvvKarrlgydGkGqsvvrseedleqaleal..keekvivEefvpfekElsvlvvrsaeGetafypvvetvqedgi 104
                  ++ + ++s ee+ ++ +++ +pv+v+ +  +  G G+ +  +ee+l ++ + +  ++ +v++E  ++  kE+   vvr+a  +  ++  +e+    gi
  EPX74546.1 608 CAKSASASSLEEALKVSKDISFPVIVR-AAYALGGLGSGFADNEEELIDLCNRAfaTSPQVLIERSMKGWKEIEYEVVRDAFDNCITVCNMENFDPLGI 705
                 6778889999*****************.8999***************9999988788999*******************99999999999999998888 PP

                 EE...EEEECEE-SCH.HHHHHHHHHHHHHHHHTSSEE CS
   ATP-grasp 105 lr...lsvapaevsek.aqkkaeeiakkiveeLggvGv 138
                      ++vap++  ++ + +  +++a +++++Lg+vG 
  EPX74546.1 706 HTgdsIVVAPSQTLTDeDYNMLRTTAVNVIRHLGVVGE 743
                 743337888877655527777888899*********95 PP

  == domain 2  score: 36.6 bits;  conditional E-value: 2.6e-12
                  TTT--B-EEEEECCHHHHHHHHHHH-SCEEEEESSS-CTTTTEEEECTCCGHHCHHHHC....GTTCEEEEE----SEEEEEEEEEETTC-EEE--E CS
   ATP-grasp    3 klglpvprflaveskeeleeaaeelglpvvvKarrlgydGkGqsvvrseedleqaleal....keekvivEefvpfekElsvlvvrsaeGetafypv 95  
                  + g+  p++  ++s ee+ee++e++ +pv+v+ +    +G     v s+ dl++ l+++    k+++v++ ++++  kE+ +  + +++G++++  +
  EPX74546.1 1138 DIGVDQPKWKELTSFEEAEEFCERVSYPVLVR-PSYVLSGAAMNTVYSKTDLQNYLKQAvainKDHPVVISKYIENAKEIEL-DAVARDGRMVMHVI 1232
                  678999**************************.99999****************999999999*****************75.55578999999988 PP

                  EEEEEE....TTEEEEEEECEE-SCHHHHHHHHHHHHHHHHHTSSEEEEEEEEEETTCTEEEEEEESS CS
   ATP-grasp   96 vetvqe....dgilrlsvapaevsekaqkkaeeiakkiveeLggvGvfavElFvledgellvnElapR 159 
                   e+v++    +g+  l++ p++++ +   ++ + a+ki e+L++ G + + +  + d+e+ v E   R
  EPX74546.1 1233 SEHVENagvhSGDATLVLPPQDLDPATISRIVDAAAKIGEALNVTGPYNIQFIAK-DNEIKVIECNVR 1299
                  8888861111456789**********************************86665.999998887766 PP

>> ATPgrasp_Ter  ATP-grasp in the biosynthetic pathway with Ter operon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   0.0   0.00011      0.13      49     122 ..     727     803 ..     716     810 .. 0.78
   2 !   24.0   0.0   2.1e-08   2.6e-05       4     123 ..    1203    1338 ..    1200    1346 .. 0.76
   3 ?   -3.3   0.1         6   7.2e+03      10      47 ..    2139    2173 ..    2138    2178 .. 0.65

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00011
  ATPgrasp_Ter  49 lielaerlaeefgldglvnvQvrededg..pkLLEiNpRasGGlg.ysalaGvnlpylalklllgleteeveepeeg 122
                   l   a ++++++g+ g  n+Q+  +  +  ++++E+N+R s      s ++G  l+  a+kl l+ + +e+++  ++
    EPX74546.1 727 LRTTAVNVIRHLGVVGECNIQYALNPFTkeYCIIEVNARLSRSSAlASKATGYPLAFTAAKLGLNIPLNEIKNSVTK 803
                   5567999**************998754435**********9655515667799999999999999877777766555 PP

  == domain 2  score: 24.0 bits;  conditional E-value: 2.1e-08
  ATPgrasp_Ter    4 allvmeyLeg.pEySvDvlaekgevlaavpRrKe.kgglq.............elekdeelielaerlaeefgldglvnvQvrededgpkLLEiN 83  
                    ++++ +y+e+ +E+  D +a++g++++ v  +   + g++                + ++++++a+++ e+++++g +n+Q+  ++++ k++E N
    EPX74546.1 1203 PVVISKYIENaKEIELDAVARDGRMVMHVISEHVeNAGVHsgdatlvlppqdlDPATISRIVDAAAKIGEALNVTGPYNIQFIAKDNEIKVIECN 1297
                    5667777776358888888888888887777776533333455656666664434466789********************************** PP

  ATPgrasp_Ter   84 pRasGGlg.ysalaGvnlpylalklllgleteeveepeegl 123 
                     Ras  +  +s + G++l+++a + ++g + +  +e +++ 
    EPX74546.1 1298 VRASRSFPfVSKVMGADLISMATEVIMGFPIKPYPEINLPR 1338
                    ****9998357788***********9998666666665555 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 6
  ATPgrasp_Ter   10 yLegpEySvDvlaekgevlaavpRrKekgglqelekde 47  
                    + e  E S Dv+a++  +++  +R ++  + +++e+ e
    EPX74546.1 2139 FVEHRELSKDVVAQSDVLYC--TRVQK-ERFSSIEEYE 2173
                    66788999999998665554..55555.4555555554 PP

>> ATP-grasp_3  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.0    0.0012       1.5     115     159 ..     722     767 ..     601     769 .. 0.81
   2 !   15.7   0.1   9.5e-06     0.011       1     158 [.    1126    1300 ..    1126    1303 .. 0.75

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0012
                  -HHHHHHHHHHHHHTTSTT--EEEEEEEEESS...SEEEEEEESS-- CS
  ATP-grasp_3 115 elkeevvelaeevvekleglaGyvGvDlvlkd..eepyviEvNPRlt 159
                  e+ + ++++a +v+++l g++G   +   l+   +e ++iEvN+Rl 
   EPX74546.1 722 EDYNMLRTTAVNVIRHL-GVVGECNIQYALNPftKEYCIIEVNARLS 767
                  456778899999*****.99999999999998989**********85 PP

  == domain 2  score: 15.7 bits;  conditional E-value: 9.5e-06
                   HTSHHHHHHHHTTT.S---...........-EESS--SSSEEEEESS-------B--SS--TTE...............EEEE---.SEEEEEEEE CS
  ATP-grasp_3    1 asdKlktykkLkeagvkvP.......tkleaeeleeeekklvvKprdGaggesvrvveekeeaeaaieeve........lvqefie.GkplSvsll 80  
                   a++ +k+ + L++ gv  P        +  +e +e++ +++ v p++   g ++  v  k ++++ +++          +++++ie  k++ ++++
   EPX74546.1 1126 AENRFKFSRMLDDIGVDQPkwkeltsFEEAEEFCERVSYPVLVRPSYVLSGAAMNTVYSKTDLQNYLKQAVainkdhpvVISKYIEnAKEIELDAV 1221
                   57899999***********8875532122223355669********9988888888877777777776665788899********946899***** PP

                   E.SSSEEEEEEEEEEEET....TEEEEEEE....S----H..HHHHHHHHHHHHTTSTT--EEEEEEEEESS.SEEEEEEESS- CS
  ATP-grasp_3   81 sdgekvlvlavnrqliekaekefvyaGnvt....pietel..keevvelaeevvekleglaGyvGvDlvlkdeepyviEvNPRl 158 
                   +   ++++ ++++ + +      v +G  t    p + +    +++v++a ++ e+l ++ G   + ++ kd+e+ viE N R 
   EPX74546.1 1222 ARDGRMVMHVISEHVENA----GVHSGDATlvlpPQDLDPatISRIVDAAAKIGEAL-NVTGPYNIQFIAKDNEIKVIECNVRA 1300
                   *77666666666555544....66777766222222322233688999999999999.***********************995 PP

>> DJ-1_PfpI  DJ-1/PfpI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.0   0.00013      0.15      42     112 ..     281     349 ..     250     356 .. 0.68
   2 ?    2.2   0.0      0.12   1.4e+02      14      67 ..     495     555 ..     488     566 .. 0.79
   3 ?    0.3   0.0      0.43   5.2e+02      16      88 ..    1036    1114 ..    1030    1123 .. 0.73
   4 ?   -1.7   0.0       1.9   2.3e+03       3      55 ..    1397    1450 ..    1395    1456 .. 0.67
   5 ?    2.1   0.0      0.12   1.5e+02     135     155 ..    2172    2194 ..    2145    2197 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00013
                 ETTSEEEE-SEEGGGCTCCG-SEEEE--BHHHHHHHHTSHHHHHHHHHHH.HTT-EEEEETTTHHHHHHTTT CS
   DJ-1_PfpI  42 gsrGlkvtvdaslddvkaaeyDalvlpGGragperlrenekvvelvkefa.ekgklvaaICagpqlLaaagv 112
                  +rG+++ v     d ++++yD l +  G   p  +      ve v+++  +k  +v+ IC g q+La+a  
  EPX74546.1 281 VTRGVELLVVPWDYDFSKENYDGLFISNGPGDPSLMD---LTVERVRRVIeSKTIPVFGICFGHQILARAAG 349
                 356766666554458889*********9977555444...6799999998356679************9865 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.12
                 HHHHHHHHHHHHTTEEEEEEESSTSEEEETTS.......EEEE-SEEGGGCTCCG-SEEEE CS
   DJ-1_PfpI  14 vElivpvdvlkragikvdvvsvdkeevkgsrG.......lkvtvdaslddvkaaeyDalvl 67 
                 +  +  +++l+++gi + ++ ++  ++++s+G       l vt+d + + +k+++ D + +
  EPX74546.1 495 YSGSQAIKALREEGIYTILINPNIATIQTSKGladkvyfLPVTADFVRKVIKQERPDGIYV 555
                 55567899************************88777777777777777777778877754 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 0.43
                  HHHHHHHHHHTTEEEEEEESSTSEEEETTS.......EEEE-SEEGGGCTCC.G-SEEEE--BHHHHHHHHTSHHHHHHHH CS
   DJ-1_PfpI   16 livpvdvlkragikvdvvsvdkeevkgsrG.......lkvtvdaslddvkaa.eyDalvlpGGragperlrenekvvelvk 88  
                  ++ +v+ l+  gik+ +v  + e+v++  +       ++++++++ld  +++ +  +++  GG++ +++++ +  ++e vk
  EPX74546.1 1036 AVRTVRTLRDRGIKTIMVNYNPETVSTDYDeadrlyfENISLETVLDIYQQEsSSGVIISMGGQT-SNNIALP-LYRENVK 1114
                  56789999999**********99998888878777777778888777555553455555578887.7777764.6666555 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 1.9
                  EEEEEETTBEHHHHHHHHHHHHHTTEEEEEEESSTSEEEETTS..EEEE-SEEGG CS
   DJ-1_PfpI    3 vlvlladgvedvElivpvdvlkragikvdvvsvdkeevkgsrG..lkvtvdasld 55  
                  +l+ ++ + e  El   v++l +ag+++ + + +++ + + +G   k+ +d   +
  EPX74546.1 1397 ILISIGSYKEKAELLPYVRRLHNAGYNIFA-TAGTSDYLMESGvpCKYLADIPAE 1450
                  899999999999999999999999999843.333334444444335555555555 PP

  == domain 5  score: 2.1 bits;  conditional E-value: 0.12
                  E-SS..SEEEETTEEEESSGGGH CS
   DJ-1_PfpI  135 yvdk..rvvvdgnlvTsrgpgaa 155 
                  y++   +++vd+nl+T+++p ++
  EPX74546.1 2172 YEELkdSFIVDNNLLTAAKPHTI 2194
                  33335589***********9886 PP

>> Peptidase_C26  Peptidase C26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   1.2e-05     0.014     103     216 .]     329     424 ..     307     424 .. 0.65
   2 ?   -3.0   0.1       4.3   5.1e+03     158     196 ..    1187    1227 ..    1178    1240 .. 0.78
   3 ?   -1.1   0.1       1.1   1.3e+03     123     180 ..    1625    1688 ..    1622    1701 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.2e-05
  Peptidase_C26 103 ergvPilgiCrGlqllnvalGGtlyqdieeqsgltdhreheqsaashavkve...kgsllaellgseeievnslHhqaike..laeelrveAvae. 192
                    ++ +P++giC G+q+l+ a G +++   +++ g+            h++  +   +g+++          +   H  a++   l ++++   v + 
     EPX74546.1 329 SKTIPVFGICFGHQILARAAGASTV---KMKFGNR----------GHNIPCTclvSGRCYI---------TSQNHGYAVNAdtLPSGWKELYVNAn 402
                    4679************999997764...3323333..........3444332110333332.........23346666544348888876555444 PP

  Peptidase_C26 193 DgviEaieseeakafvlgvQwHPE 216
                    Dg  E i  +e  +++++vQ+HPE
     EPX74546.1 403 DGSNEGIYNTE--YPFFSVQFHPE 424
                    99999998888..67899999998 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 4.3
  Peptidase_C26  158 llaellgseeievnslHhqaike...laeelrveAvaeDgvi 196 
                      l++ l+ + +++n  H   i++    a+e++  Ava+Dg +
     EPX74546.1 1187 DLQNYLK-QAVAINKDHPVVISKyieNAKEIELDAVARDGRM 1227
                     5566666.8889999999999987778999999999999965 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 1.1
  Peptidase_C26  123 GGtlyqdieeqsgltdhreheq.....saashavkve.kgsllaellgseeievnslHhqaike 180 
                      G ly + e++s+ +dh+ + +       ++hav ++ k++ la++l   + +   +H  +++ 
     EPX74546.1 1625 SGCLYLHFENTSSGMDHVTEIAshfslWPQTHAVVTDaKSTTLASVLLLASLHNRRIHVASVTS 1688
                     69999****9999999998884445565567888776578889999976666666666666654 PP

>> GARS_A  Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0     0.028        34       9     101 ..     600     686 ..     594     735 .. 0.80
   2 ?   -3.5   0.0       6.2   7.4e+03      33      73 ..     808     848 ..     789     859 .. 0.73
   3 !   10.0   0.0   0.00044      0.53       8     105 ..    1134    1228 ..    1128    1247 .. 0.81
   4 ?   -2.7   0.0       3.5   4.2e+03     170     188 ..    1281    1299 ..    1255    1301 .. 0.74

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.028
                 HHHHTT--B--EEEESSHHHHHHHHHHHSSSEEEEEESC-GGGT-EEEESSHHHHHHHHHHHCTS-TTCCCCSSEEEEE---S.EEEEEEEEEC CS
      GARS_A   9 llkkagiptaeyeaftdpeeakeyieeatakalVvKadglaagKgvivakseeealkavkeilekkkfGeagekvviEelleG.eEvsllalvd 101
                  +++++ + a+ ++ ++ eea ++ ++ ++++ +v+a+   +g g   a++eee ++  +  +       ++ +v+iE  ++G +E+   ++ d
  EPX74546.1 600 AMDEIDEKCAKSASASSLEEALKVSKDISFPV-IVRAAYALGGLGSGFADNEEELIDLCNRAFA------TSPQVLIERSMKGwKEIEYEVVRD 686
                 478889999***********************.999999999************9999998885......7899*******9954665555555 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 6.2
                 HHHHSSSEEEEEESC-GGGT-EEEESSHHHHHHHHHHHCTS CS
      GARS_A  33 ieeatakalVvKadglaagKgvivakseeealkavkeilek 73 
                   e + + +VvK  +    K + v ++ + ++k v e+++ 
  EPX74546.1 808 CFEPSLDYVVVKIPRWDLKKFTRVSTQLSSSMKSVGEVMSI 848
                 4455556689999999999999999999*******999973 PP

  == domain 3  score: 10.0 bits;  conditional E-value: 0.00044
                  HHHHHTT--B--EEEESSHHHHHHHHHHHSSSEEEEEESC-GGGT-EEEESSHHHHHHHHHHHCTS-TTCCCCSSEEEEE---.SEEEEEEEEE.CT CS
      GARS_A    8 dllkkagiptaeyeaftdpeeakeyieeatakalVvKadglaagKgvivakseeealkavkeilekkkfGeagekvviEelle.GeEvsllalv.dg 102 
                  ++l+++g+  ++++++t+ eea+e+ e+++ ++  v+++ + +g  +  + s+++  +++k+ +      +  + vvi +++e  +E+ l a+  dg
  EPX74546.1 1134 RMLDDIGVDQPKWKELTSFEEAEEFCERVSYPV-LVRPSYVLSGAAMNTVYSKTDLQNYLKQAVA----INKDHPVVISKYIEnAKEIELDAVArDG 1225
                  57899****************************.9999999999999888888877777777665....5567899999998734678777765255 PP

                  TEE CS
      GARS_A  103 ktv 105 
                  + v
  EPX74546.1 1226 RMV 1228
                  554 PP

  == domain 4  score: -2.7 bits;  conditional E-value: 3.5
                  EEEEEEETTEEEEEEEESS CS
      GARS_A  170 yaglmlvedgpkvlefnvR 188 
                    +++  ++  kv+e nvR
  EPX74546.1 1281 NIQFIAKDNEIKVIECNVR 1299
                  4566777888********9 PP

>> RimK  RimK-like ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0     0.054        64      25      71 ..     615     659 ..     598     684 .. 0.75
   2 ?    7.7   0.0    0.0021       2.5       1      94 [.    1126    1222 ..    1126    1312 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.054
                 SS-S-HHHHHHTT-.-SSEEEEE-TTTT--EEEEE-SHHHHHHHHHH CS
        RimK  25 rdeedaekliekiklrfPvvvKsvegsqGikvvlakkeqklkqvlea 71 
                  + e+a k+ + i  +fPv+v+  ++  G++  +a +e++l ++ + 
  EPX74546.1 615 SSLEEALKVSKDI--SFPVIVRAAYALGGLGSGFADNEEELIDLCNR 659
                 4445555555555..8**********************999887654 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.0021
                  HH-HHHHHHHHHHTT-----EEEESS-S-HHHHHHTT-.-SSEEEEE-TTTT--EEEEE-SHHHHHHHHHH.....GGG--EEEEE--SS-SEEEEE CS
        RimK    1 ardKlkslklLakakikvpntalardeedaekliekiklrfPvvvKsvegsqGikvvlakkeqklkqvlea.....lkeailvqeyieeaenediRv 92  
                  a++++k  ++L   +++ p+ +   + e+ae++ e++  + Pv+v+ ++   G  +     + +l++ l+       ++ +++ +yie+a++ ++  
  EPX74546.1 1126 AENRFKFSRMLDDIGVDQPKWKELTSFEEAEEFCERV--SYPVLVRPSYVLSGAAMNTVYSKTDLQNYLKQavainKDHPVVISKYIENAKEIELDA 1220
                  68999999*****************************..7*******999999877666666666666554444334445799*****999866555 PP

                  EE CS
        RimK   93 lv 94  
                  + 
  EPX74546.1 1221 VA 1222
                  44 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2244 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       445  (0.0248201); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 1.13u 0.32s 00:00:01.45 Elapsed: 00:00:00.51
# Mc/sec: 13136.93
//
Query:       EPX74547.1  [L=411]
Description: mRNA (N6-adenosine)-methyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-39  134.8   0.5    4.5e-39  134.1   0.5    1.3  1  MT-A70    MT-A70
  ------ inclusion threshold ------
      0.066   12.5   0.9       0.13   11.5   0.9    1.4  1  WBS28     Williams-Beuren syndrome chromosomal region 28 prot


Domain annotation for each model (and alignments):
>> MT-A70  MT-A70
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.1   0.5     5e-43   4.5e-39       4     172 .]     228     392 ..     225     392 .. 0.93

  Alignments for each domain:
  == domain 1  score: 134.1 bits;  conditional E-value: 5e-43
                 EEE---BHHCC..HTT--SS--B-HHHHHTS-GGGCECCEEEEEEEEETTCHHHH..HHHHHHHCT-EEEEEEEEEEE-TTSCBS-BS-TTSSSBB-EE CS
      MT-A70   4 iiidPpweeklvarkkelpyktlneeelkaLpipelldkrslvflWvtnrellel..krellkkWglelveeltwlkinklgepiatlesgavlkkskE 100
                  ++dPpw +++var++  + ++++  +l+ +p+++ll+k+++v++W+tn++++    k  l+ +W+l+ v++++wlki+++g+p+++ +s   ++k++E
  EPX74547.1 228 FVLDPPWPNRSVARRN-PYPVNRHLGYLRDIPVKHLLKKKGVVAVWCTNKKKYIDfvKDTLFASWNLHYVATWIWLKITAHGDPLFDIHSR--MRKPWE 323
                 689***********95.7778999**************************9998889999**************************98887..****** PP

                 EEEEEEES---TTT.TTB-TTSSBSEEEEE-CTTTSS-THHHHHHHHHCTCS-EEEET--G--TTEEEEETT CS
      MT-A70 101 hllvgvkgnvkrstdkiinknvdtdliisperehsrKPpelfellehllesarkLelFaRslrpgwltvGne 172
                 hl++gv+ ++ ++ +k i   ++  +++s  ++hsrKP++ ++l e+l  + + Le+F+R l  +w+t+G++
  EPX74547.1 324 HLIIGVTREYLQTHSKRI---QKNYTLVSVPDYHSRKPSLHPFLKEWLQCDPTGLEVFGRCLSRNWITWGQQ 392
                 **********98887755...46678999*****************************************97 PP

>> WBS28  Williams-Beuren syndrome chromosomal region 28 protein homologue
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.9   1.4e-05      0.13     162     208 ..     254     300 ..     247     305 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 1.4e-05
       WBS28 162 lgrlkskallenrvvlellallrrLywwvesttaltsWhLaylvtWt 208
                 l  ++ k ll+ + v  ++   ++ y    + t ++sW+L y+ tW+
  EPX74547.1 254 LRDIPVKHLLKKKGVVAVWCTNKKKYIDFVKDTLFASWNLHYVATWI 300
                 5666789999999999*****9999998889999************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (411 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       671  (0.0374254); expected 358.6 (0.02)
Passed bias filter:                      541  (0.0301746); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.21s 00:00:00.70 Elapsed: 00:00:00.37
# Mc/sec: 3344.44
//
Query:       EPX74548.1  [L=544]
Description: HAL protein kinase Ppk8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.8e-46  158.6   0.0    2.7e-46  158.1   0.0    1.2  1  Pkinase      Protein kinase domain
      3e-19   69.3   0.0    4.2e-19   68.8   0.0    1.2  1  Pkinase_Tyr  Protein tyrosine kinase
    0.00049   20.1   0.5     0.0019   18.2   0.1    2.1  3  APH          Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.094   12.1   0.3       0.18   11.2   0.3    1.4  1  Kdo          Lipopolysaccharide kinase (Kdo/WaaP) family
      0.099   11.9   0.0       0.25   10.6   0.0    1.7  2  Kinase-like  Kinase-like


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.1   0.0   7.4e-50   2.7e-46       4     264 .]     272     533 ..     270     533 .. 0.90

  Alignments for each domain:
  == domain 1  score: 158.1 bits;  conditional E-value: 7.4e-50
                 EEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH...HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHH CS
     Pkinase   4 leklGeGsfGkVykaveketgkivAvKkikkekakkkke...kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseee 99 
                  + +GeG++G V  + + + +++ + K+++   +k   +   + +++E +i  +l+hpniv++y++++ k++++ +le+ + + l++++ + g+   e+
  EPX74548.1 272 GKLVGEGASGYVRLIQKPDGSCTHVAKVFRPPIDKRFLRryvRFFIAEYSIASTLNHPNIVKVYDIIYAKHTIIQILEHTPFD-LFSFVVN-GHCFAEK 368
                 5789*************9999*******998877776656778899***********************************77.8888875.5555567 PP

                 HHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.....BCTTTSCGGGS-HHHHTTSCB.SHHHHHHHHHHHHHHHHH CS
     Pkinase 100 akkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.....ltsfvgtseYlAPEvlkeney.skkvDvWslGvilyellt 192
                 a ++++q+l+g++y+Hs g+ HrD+K +N+++d++ +lKi+DFG a  ++   +     ++  vg++ Y+APEvl+++ y  ++vDvWs++v+  +l+ 
  EPX74548.1 369 ADQLFYQLLHGIDYMHSVGLAHRDVKLDNLMLDNESNLKIIDFGTAFVFHYPLEstmlkAEGLVGSKPYVAPEVLSDKLYdPRAVDVWSCAVVYCCLTL 467
                 999**********************************************9998889999999******************7789*************** PP

                 SS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 193 gkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 +k p+++ ++++k  k       +l+ +++  ++++  ++++e+ +  +k +l+ d +kR+ ++++l+ +++
  EPX74548.1 468 QKFPWKAPDESNKRFKT------FLNQMKNPALEIELINSLPEKSRTAIKGMLDPDAEKRWDIASVLNTSWM 533
                 ******76665533222......333356678999***********************************97 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.8   0.0   1.2e-22   4.2e-19       4     223 ..     272     491 ..     270     530 .. 0.75

  Alignments for each domain:
  == domain 1  score: 68.8 bits;  conditional E-value: 1.2e-22
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEE....STTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCT CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtl....keeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkek 97 
                  gk +GeGa G V   +     + ++++Va K++    +++  ++  + ++ e++i ++l+hpnivk++ +++ +++++ ++e  +  dL +f+ +   
   EPX74548.1 272 GKLVGEGASGYVRLIQKP---DGSCTHVA-KVFrppiDKRFLRRYVRFFIAEYSIASTLNHPNIVKVYDIIYAKHTIIQILEHTPF-DLFSFVVNG-- 362
                  667788888888766555...44445544.554111144445555778999**********************9*99999999998.788888876.. PP

                  TTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEET..TTSSEEEETTSSTSGGGGS-HHHHHHSEEE.HHHHHHHHH CS
  Pkinase_Tyr  98 ekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardi..ekddeyvkkeeaklpvkWmapEslkekkft.sksDvWsfG 192
                   ++  ++  ++ +q+ +G++y++s  l Hrd+   N +l++++  ki DfG a       ++++ k+e+   +  ++apE+l++k +   + DvWs +
   EPX74548.1 363 -HCFAEKADQLFYQLLHGIDYMHSVGLAHRDVKLDNLMLDNESNLKIIDFGTAFVFhyPLESTMLKAEGLVGSKPYVAPEVLSDKLYDpRAVDVWSCA 459
                  .67788888999***************************************998774234666688888889999************83467****99 PP

                  HHHHHHHTTSSGTTTTS..HHHHHHHHHHTTEE CS
  Pkinase_Tyr 193 vllwEiftlgespypgl..kneevleklkegkr 223
                  v+    +tl + p++    +n+++ ++l++ k+
   EPX74548.1 460 VVY-CCLTLQKFPWKAPdeSNKRFKTFLNQMKN 491
                  875.56677888876653366666666655544 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.97   3.5e+03      13      44 ..     283     316 ..     273     326 .. 0.59
   2 !   18.2   0.1   5.3e-07    0.0019     165     198 ..     385     416 ..     365     422 .. 0.81
   3 ?   -2.8   0.0       1.4   4.9e+03     203     222 ..     522     542 ..     522     544 .] 0.83

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.97
                 EEEEEETT-..-EEEEEE-TTS-HHHHHHHHHHH CS
         APH  13 tylvttpag..ryvlrrnpparaaeeirrevall 44 
                 + l++ p+g  + v ++++p+  ++++rr+v+++
  EPX74548.1 283 VRLIQKPDGscTHVAKVFRPPIDKRFLRRYVRFF 316
                 5555555544555566666655555555555554 PP

  == domain 2  score: 18.2 bits;  conditional E-value: 5.3e-07
                 -EEEE-SS-SGGGEEEC..TTEEEEE---TT-EE CS
         APH 165 ptvllHgDlhpgNllvdpddgrvtGviDfedagl 198
                 + +l H+D +++Nl++d + +    +iDf++a +
  EPX74548.1 385 SVGLAHRDVKLDNLMLDNESNLK--IIDFGTAFV 416
                 56899************555555..******986 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 1.4
                 HHHHCCHHH.CSCHCCCHCHH CS
         APH 203 yDlavllrs.wtseldpefla 222
                 +D+a++l++ w+ ++  ++++
  EPX74548.1 522 WDIASVLNTsWMKDTATSLRQ 542
                 69*****777**999998887 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.3   4.9e-05      0.18     126     166 ..     375     411 ..     345     415 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 4.9e-05
         Kdo 126 avgrliaklhragvnHadlyaknillqqeeeeeaeiwliDl 166
                 ++   i  +h++g+ H+d+   n++l++e     ++ +iD+
  EPX74548.1 375 QLLHGIDYMHSVGLAHRDVKLDNLMLDNES----NLKIIDF 411
                 55566899*********************9....9999999 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       1.6   5.8e+03     185     203 ..     236     255 ..     235     259 .. 0.79
   2 ?   10.6   0.0   7.1e-05      0.25     149     288 .]     372     521 ..     345     521 .. 0.78

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 1.6
  Kinase-like 185 lggftaLvragtkvvl.sev 203
                  l+ + +L+++gtk++l + v
   EPX74548.1 236 LRQLCHLRTVGTKYKLvNRV 255
                  567789*******9986766 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 7.1e-05
  Kinase-like 149 lTlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvlseve........kgfaPpEllgsrggytrknktkmthkldaWqlGl 238
                  l  ql+  + ++++ gl h +++ dnl+ld++  l++ +f+  +        s++         k +  pE+l+  + y +        ++d+W   +
   EPX74548.1 372 LFYQLLHGIDYMHSVGLAHRDVKLDNLMLDNESNLKIIDFGTAFVFHYPLE-STMLkaeglvgsKPYVAPEVLSD-KLYDP-------RAVDVWSCAV 460
                  44688888899*****************************87654433222.22223556766777888999998.44566.......6789999887 PP

  Kinase-like 239 viyriwclklPltlateeakeew............kfklckkipekvkaLlkkfLqlsqedR 288
                  v   +   k P   +  e ++ +            + +l++  pek ++ +k++L ++ e+R
   EPX74548.1 461 VYCCLTLQKFPWKAPD-ESNKRFktflnqmknpalEIELINSLPEKSRTAIKGMLDPDAEKR 521
                  7777777788887654.455566677999999999999999999999999999999999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (544 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       411  (0.0229238); expected 358.6 (0.02)
Passed bias filter:                      297  (0.0165653); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 3986.48
//
Query:       EPX74549.1  [L=403]
Description: nucleoporin Nup45 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.9e-12   47.3  75.2    3.1e-09   37.6  26.0    3.4  3  Nucleoporin_FG  Nucleoporin FG repeat region


Domain annotation for each model (and alignments):
>> Nucleoporin_FG  Nucleoporin FG repeat region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9  38.8   0.00016       2.8       3      91 .]       2     112 ..       1     112 [. 0.73
   2 !   21.1  36.7   2.3e-08   0.00042       6      91 .]      62     167 ..      58     167 .. 0.57
   3 !   37.6  26.0   1.7e-13   3.1e-09       1      85 [.     119     200 ..     119     211 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00016
  Nucleoporin_FG   3 FGaaatstsgglFGststtatstgglFG..........asstatatasggglfgat.....sqtaasgglFGstnattqtta......tgglFGs 76 
                     FG ++++++g   G++ +t+t++++lF           +s++a  +a g glfg++     +++++sgglF ++++++++        tggl G+
      EPX74549.1   2 FGFNKPASTGFGIGNQGNTSTTGSNLFSqppssstaapNSQPAFGSAGG-GLFGQQkpalgTTNPQSGGLFSQSTTAAPAPGiqgtapTGGLLGQ 95 
                     6666666666677777777777777777666544332222222223333.499999*******************999988899999******** PP

  Nucleoporin_FG  77 taataqq..ttsgglFG 91 
                     ++++++     +gglFG
      EPX74549.1  96 SQPSTSGfgGGGGGLFG 112
                     *9999889888888**9 PP

  == domain 2  score: 21.1 bits;  conditional E-value: 2.3e-08
  Nucleoporin_FG   6 aatstsgglFGststt........atstgglFGasstatatasgg..glfgatsqtaasgglFGstnattqtta.tgglFGstaataqq...... 83 
                     +++++sgglF +++t+        +++tggl G+s+++t+   gg  glfg+   +++++glFG+++ +++t++ ++glFG+t++++++      
      EPX74549.1  62 TTNPQSGGLFSQSTTAapapgiqgTAPTGGLLGQSQPSTSGFGGGggGLFGS---KPSGTGLFGQAQPSSATNQpSTGLFGQTQPSTTPgtgllg 153
                     5666777777777777777777766666677774444433333332346655...5555666666555555555555666655555554555555 PP

  Nucleoporin_FG  84 ......ttsgglFG 91 
                           ++sgglFG
      EPX74549.1 154 qsqsttQPSGGLFG 167
                     55555489999999 PP

  == domain 3  score: 37.6 bits;  conditional E-value: 1.7e-13
  Nucleoporin_FG   1 glFG.....aaatstsgglFGststtatstgglFGasstatatasggglfgatsqtaasgglFGstnattqttatgglFGstaataqqtt 85 
                     glFG     +a++++s+glFG+t+ ++t+++gl G +s++t+++sgg lfg+  ++a+ gglFG++ ++++    ++lFGst++++ +++
      EPX74549.1 119 GLFGqaqpsSATNQPSTGLFGQTQPSTTPGTGLLG-QSQSTTQPSGG-LFGQ--KPAQEGGLFGQSLQKPN----TSLFGSTNNQQPNAQ 200
                     69999999889999999******************.66677777776.***9..89**********98875....69***9999997644 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (403 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       894  (0.0498633); expected 358.6 (0.02)
Passed bias filter:                      566  (0.031569); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 2823.52
//
Query:       EPX74550.1  [L=362]
Description: mRNA cleavage and polyadenylation specificity factor complex subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.5e-25   85.9   0.5    1.7e-24   85.1   0.5    1.4  1  Fip1      Fip1 motif


Domain annotation for each model (and alignments):
>> Fip1  Fip1 motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.1   0.5   9.3e-29   1.7e-24       1      43 []     123     165 ..     123     165 .. 0.97

  Alignments for each domain:
  == domain 1  score: 85.1 bits;  conditional E-value: 9.3e-29
        Fip1   1 didldqleekpWrkpGaDisDYFNYGfdEetWkeYcekqeklr 43 
                 ++dl++le+kpWrkpGaDisDYFNYGfdE+tW++Yc+kq++lr
  EPX74550.1 123 EVDLESLEDKPWRKPGADISDYFNYGFDEFTWAAYCAKQTTLR 165
                 69*************************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (362 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       530  (0.029561); expected 358.6 (0.02)
Passed bias filter:                      252  (0.0140554); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2623.44
//
Query:       EPX74551.1  [L=137]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.6e-15   55.7   0.1    7.5e-15   54.7   0.1    1.6  1  Con-6     Conidiation protein 6


Domain annotation for each model (and alignments):
>> Con-6  Conidiation protein 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.7   0.1   4.2e-19   7.5e-15       2      33 ..      99     130 ..      98     131 .. 0.94

  Alignments for each domain:
  == domain 1  score: 54.7 bits;  conditional E-value: 4.2e-19
       Con-6   2 penvirGyKAtLsNPnvSeeAKehAkeeLekl 33 
                  +nv +GyKAtL+NPn Se AK+hA e+L++l
  EPX74551.1  99 LGNVRGGYKATLHNPNISEGAKKHAHEVLDEL 130
                 58****************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       232  (0.0129399); expected 358.6 (0.02)
Passed bias filter:                      181  (0.0100954); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.24s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 1059.77
//
Query:       EPX74552.1  [L=70]
Description: translocon gamma subunit Sss1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-12   47.6   0.1    1.3e-12   47.4   0.1    1.1  1  SecE      SecE/Sec61-gamma subunits of protein translocation 
  ------ inclusion threshold ------
      0.025   14.6   0.0      0.031   14.3   0.0    1.1  1  Hol_Tox   Putative Holin-like Toxin (Hol-Tox)


Domain annotation for each model (and alignments):
>> SecE  SecE/Sec61-gamma subunits of protein translocation complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.4   0.1   1.4e-16   1.3e-12       4      54 ..      16      65 ..      13      67 .. 0.92

  Alignments for each domain:
  == domain 1  score: 47.4 bits;  conditional E-value: 1.4e-16
                HHHHHHHHHCCCCCHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        SecE  4 fkevkaElkKVtWPtrkEllkttvvVlvfvvimglflflvDlvfsklinll 54
                +ke   ++k++++P+rkE+++ + +V+ ++v+mg+++++++l++ ++in +
  EPX74552.1 16 YKEGSLFIKRCVKPDRKEFFSVSRAVATGFVLMGFIGYIIKLIH-IPINKV 65
                6888899************************************9.**9765 PP

>> Hol_Tox  Putative Holin-like Toxin (Hol-Tox)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   3.5e-06     0.031       8      48 ..      19      59 ..      15      64 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 3.5e-06
     Hol_Tox  8 esevvfktVltdtkkrrallsvsealQliLaFGtFilalla 48
                +s +  ++V +d k+  +   +  +  ++++F ++i+ l+ 
  EPX74552.1 19 GSLFIKRCVKPDRKEFFSVSRAVATGFVLMGFIGYIIKLIH 59
                5677899******************************9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       365  (0.0203581); expected 358.6 (0.02)
Passed bias filter:                      272  (0.015171); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.24s 00:00:00.58 Elapsed: 00:00:00.38
# Mc/sec: 551.60
//
Query:       EPX74553.1  [L=779]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-55  181.7   9.3    7.1e-08   31.7   0.0    8.6  8  PUF       Pumilio-family RNA binding repeat


Domain annotation for each model (and alignments):
>> PUF  Pumilio-family RNA binding repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.0   1.2e-10   2.1e-06       1      33 [.     461     493 ..     461     495 .. 0.90
   2 !   24.3   0.0   8.9e-10   1.6e-05       5      30 ..     501     526 ..     497     531 .. 0.85
   3 !   15.6   0.0   5.1e-07    0.0091       6      34 ..     538     567 ..     533     568 .. 0.83
   4 !   31.7   0.0     4e-12   7.1e-08       2      35 .]     571     604 ..     570     604 .. 0.90
   5 !   22.4   0.0   3.7e-09   6.6e-05       1      25 [.     606     630 ..     606     638 .. 0.89
   6 !   24.0   0.1   1.2e-09   2.1e-05       2      28 ..     643     669 ..     642     675 .. 0.84
   7 !   17.5   0.0   1.3e-07    0.0023       2      32 ..     679     709 ..     678     712 .. 0.90
   8 !   16.7   0.0   2.3e-07    0.0042       4      34 ..     719     749 ..     716     750 .. 0.85

  Alignments for each domain:
  == domain 1  score: 27.1 bits;  conditional E-value: 1.2e-10
                 HHGGGHHHHHTSTTHHHHHHHHHHHSCHHHHHH CS
         PUF   1 sikgnlvqLstdqyGnyvvQkllehateeqkkl 33 
                 +++g++ ++++dq+G++ +Qkll+ +++++ +l
  EPX74553.1 461 EMLGRIPSICKDQHGCRYLQKLLDENPKTNASL 493
                 6899********************999888765 PP

  == domain 2  score: 24.3 bits;  conditional E-value: 8.9e-10
                 GHHHHHTSTTHHHHHHHHHHHSCHHH CS
         PUF   5 nlvqLstdqyGnyvvQkllehateeq 30 
                 ++v+L++d++Gny +Qkl+ +a  eq
  EPX74553.1 501 SIVELMKDPFGNYMCQKLFVYAYREQ 526
                 79*****************9876666 PP

  == domain 3  score: 15.6 bits;  conditional E-value: 5.1e-07
                 HHHHHTSTTHHHHHHHHHHH.SCHHHHHHH CS
         PUF   6 lvqLstdqyGnyvvQklleh.ateeqkkli 34 
                 +v + +d +G++++Q+++++ ++ eq++l+
  EPX74553.1 538 VVGINSDLHGTRAMQNIIDKlTSNEQISLL 567
                 5666689*************9999999887 PP

  == domain 4  score: 31.7 bits;  conditional E-value: 4e-12
                 HGGGHHHHHTSTTHHHHHHHHHHHSCHHHHHHHH CS
         PUF   2 ikgnlvqLstdqyGnyvvQkllehateeqkklil 35 
                 + ++lv+L++d +Gn+v+Qk+++++ +e  +l++
  EPX74553.1 571 LTPFLVELACDGNGNHVLQKCIDKFLPEKLELLF 604
                 679*********************9999888775 PP

  == domain 5  score: 22.4 bits;  conditional E-value: 3.7e-09
                 HHGGGHHHHHTSTTHHHHHHHHHHH CS
         PUF   1 sikgnlvqLstdqyGnyvvQklleh 25 
                 sik ++++L+t+++G++v+Q+ l+ 
  EPX74553.1 606 SIKRHVLKLATHRHGCCVLQRSLDA 630
                 5888******************994 PP

  == domain 6  score: 24.0 bits;  conditional E-value: 1.2e-09
                 HGGGHHHHHTSTTHHHHHHHHHHHSCH CS
         PUF   2 ikgnlvqLstdqyGnyvvQkllehate 28 
                 i+ + + L++d+yGnyv+Q++le+++e
  EPX74553.1 643 IISHALFLVQDPYGNYVIQHILEMNVE 669
                 67777779***************9766 PP

  == domain 7  score: 17.5 bits;  conditional E-value: 1.3e-07
                 HGGGHHHHHTSTTHHHHHHHHHHHSCHHHHH CS
         PUF   2 ikgnlvqLstdqyGnyvvQkllehateeqkk 32 
                 ++g++++Ls  ++ +++v+ ++ +a+++ +k
  EPX74553.1 679 FQGHICELSLQKFSSNAVEDCIRTASPSTRK 709
                 789*********************9998765 PP

  == domain 8  score: 16.7 bits;  conditional E-value: 2.3e-07
                 GGHHHHHTSTTHHHHHHHHHHHSCHHHHHHH CS
         PUF   4 gnlvqLstdqyGnyvvQkllehateeqkkli 34 
                 +++++L +d y+nyv+Q +l h+  e++++i
  EPX74553.1 719 PKIEDLLNDSYANYVMQSFLIHSNDEEREKI 749
                 899*****************99777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (779 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       700  (0.0390429); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.31s 00:00:00.98 Elapsed: 00:00:00.48
# Mc/sec: 4895.94
//
Query:       EPX74554.1  [L=764]
Description: GTPase activating protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-46  158.1   0.0    4.7e-46  157.2   0.0    1.5  1  RabGAP-TBC  Rab-GTPase-TBC domain


Domain annotation for each model (and alignments):
>> RabGAP-TBC  Rab-GTPase-TBC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.2   0.0   2.6e-50   4.7e-46       3     215 .]     507     711 ..     506     711 .. 0.89

  Alignments for each domain:
  == domain 1  score: 157.2 bits;  conditional E-value: 2.6e-50
  RabGAP-TBC   3 lRgevWklllgyepevkrlkksekkqeksekeksklekseeskelsqIkkDvprtfp.esesfknkqgqnqLeriLkaysiynpevgYcqGmndivapl 100
                 +R++vW  ++ +++          +   + +e   +++ +++++  qI++D++rt+  + ++  n++g  +L+r+L+ays++npevgYcqGmn i+a++
  EPX74554.1 507 YRPKVWLECSAARQ---------LHVPGYYDELLAKSDTSDPSNRIQIDQDIKRTLVgNVFFGGNGPGVPKLRRVLLAYSLHNPEVGYCQGMNVIAAFF 596
                 68888888877732.........22222333334444444555578999********888*************************************** PP

  RabGAP-TBC 101 llvsldeeeaFwcfvsLlekyklrdlytsslpglkrklkvleellkkkdpklykhlkeegldlelfaikwfltlflrefpletvlrlwD.lllegekfv 198
                 ll++ +ee++F ++ sL+e+y +++++t++l g ++++ vl+e+++  +p++++hl+++++dle  +++wfl l++ +++ ++ +r++D +++ g+   
  EPX74554.1 597 LLIYASEEDVFYLIMSLIENYLPKNYFTEDLLGSRADQIVLKEYVSLLLPQISSHLETLKVDLEAVTLHWFLSLYTDTVNTKLGFRILDlFFCDGYPC- 694
                 *****************************************************************************************9999***66. PP

  RabGAP-TBC 199 llrvalailklleeell 215
                 l+rval i+ +l++e++
  EPX74554.1 695 LFRVALDIIYTLKDEIM 711
                 *************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (764 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       613  (0.0341904); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.71u 0.28s 00:00:00.99 Elapsed: 00:00:00.46
# Mc/sec: 4969.22
//
Query:       EPX74555.1  [L=579]
Description: AGC/RSK protein kinase Ppk14 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.8e-72  243.3   0.0    4.4e-72  242.6   0.0    1.3  1  Pkinase         Protein kinase domain
    1.1e-28  100.2   0.0    6.7e-21   74.7   0.0    2.2  2  Pkinase_Tyr     Protein tyrosine kinase
    3.7e-07   29.8   0.0       0.17   11.1   0.0    3.1  3  Kinase-like     Kinase-like
     0.0066   15.3   0.0     0.0066   15.3   0.0    2.0  2  Pkinase_fungal  Fungal protein kinase
  ------ inclusion threshold ------
      0.032   13.6   0.0      0.059   12.7   0.0    1.3  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
      0.064   13.2   0.0        3.4    7.5   0.0    2.1  2  APH             Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  242.6   0.0   1.5e-75   4.4e-72       2     264 .]     210     500 ..     209     500 .. 0.95

  Alignments for each domain:
  == domain 1  score: 242.6 bits;  conditional E-value: 1.5e-75
                 EEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHH..HHSS--H CS
     Pkinase   2 ekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladlle..rkgslse 97 
                 ek+  lG+G++G+Vy ++ek+t + +A+K+++k+++ k+++ k++++E +il++++hp+iv+ly++f+++++lyl++ey++gge++++l+    ++l+e
  EPX74555.1 210 EKVFLLGKGGVGRVYLVREKKTTRFFAMKVLNKQEMIKRNKiKRAFAEQEILATSNHPFIVTLYHSFQSDEYLYLCMEYCMGGEFFRALQrrPGRCLAE 308
                 566689******************************999999************************************************644456*** PP

                 HHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.............................BCTTTSCGGGS-HH CS
     Pkinase  98 eeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.............................ltsfvgtseYlAPE 167
                 +eak++++++ ++leylH +g+i+rDlKpeNiL++e+g+++++DF+l+k+  s  +                             ++sfvgt+eY+APE
  EPX74555.1 309 HEAKFYIAEVTAALEYLHLMGFIYRDLKPENILLHESGHIMLSDFDLSKQSGSIGSptviqarnsspssqstyaldtkscianfrTNSFVGTEEYIAPE 407
                 **************************************************99988889***************************************** PP

                 HHTTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTT....HHHHHTSG CS
     Pkinase 168 vlkeneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRlt....aeellqhp 262
                 v+k+ +++++vD+W+lG+++ye+l+ ++pf+g++++ +++++l++     +++     ++ +a +is+ +k+l++kll kd+++Rl+    a++++ hp
  EPX74555.1 408 VIKGCGHTSAVDWWTLGILFYEMLYATTPFKGKNRNMTFSNILHR-----EVV---FPEYSNAPSISSLCKSLIRKLLLKDENDRLGsqagASDVKLHP 498
                 *************************************99999999.....333...35789999**********************9888888888888 PP

                 GG CS
     Pkinase 263 yl 264
                 ++
  EPX74555.1 499 FF 500
                 87 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.7   0.0   2.3e-24   6.7e-21       7     153 ..     215     359 ..     209     377 .. 0.91
   2 !   23.4   0.0     1e-08   3.1e-05     170     230 ..     402     462 ..     384     485 .. 0.80

  Alignments for each domain:
  == domain 1  score: 74.7 bits;  conditional E-value: 2.3e-24
                  EEEESSEEEEEEEEETTTTSSEEEEEEEEESTTS..SHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBH CS
  Pkinase_Tyr   7 lGeGafGkVvegtlkgekekkevkVavKtlkeea..teeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekekltl 102
                  lG+G  G+V+  + k    k++   a+K+l+++   ++++ ++ + e +i+ + +hp iv l+    ++e l++ +ey+ gG++   L+++  + l  
   EPX74555.1 215 LGKGGVGRVYLVREK----KTTRFFAMKVLNKQEmiKRNKIKRAFAEQEILATSNHPFIVTLYHSFQSDEYLYLCMEYCMGGEFFRALQRRPGRCLAE 308
                  9*********99888....788889999996554114556889999*********************************************9999999 PP

                  HHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEET CS
  Pkinase_Tyr 103 kdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardi 153
                  ++   ++++v +++eyL+ + ++ rdl   N+Ll+e+ ++ +sDf L+++ 
   EPX74555.1 309 HEAKFYIAEVTAALEYLHLMGFIYRDLKPENILLHESGHIMLSDFDLSKQS 359
                  999999******************************************986 PP

  == domain 2  score: 23.4 bits;  conditional E-value: 1e-08
                  GGS-HHHHHHSEEEHHHHHHHHHHHHHHHHTTSSGTTTTS.HHHHHHHHHHTTEES-BBTTS CS
  Pkinase_Tyr 170 kWmapEslkekkftsksDvWsfGvllwEiftlgespypgl.kneevleklkegkrlekpekc 230
                  +++apE++k +  ts+ D W  G+l +E++  + +p++g  +n+++ + l+++   ++ +++
   EPX74555.1 402 EYIAPEVIKGCGHTSAVDWWTLGILFYEMLY-ATTPFKGKnRNMTFSNILHREVVFPEYSNA 462
                  799**************************98.99****995566666666766666655554 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.8   0.0      0.01        30      14      59 ..     209     254 ..     199     267 .. 0.83
   2 !   11.1   0.0   5.8e-05      0.17     141     189 ..     307     354 ..     280     375 .. 0.82
   3 !   11.0   0.0   6.3e-05      0.19     228     288 .]     415     484 ..     408     484 .. 0.91

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.01
  Kinase-like  14 lvrgellkkgdrsvvfevkdqetgeplavkvfllpseaskkdlerl 59 
                  + ++ ll+kg+ + v++v++++t   +a+kv   ++   +++++r 
   EPX74555.1 209 FEKVFLLGKGGVGRVYLVREKKTTRFFAMKVLNKQEMIKRNKIKRA 254
                  567889***************************9999999999984 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 5.8e-05
  Kinase-like 141 letiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggft 189
                   e+ a+ ++ +++     +L+  g +  +++++n+ll+e g +ml +f+
   EPX74555.1 307 AEHEAKFYI-AEVTAALEYLHLMGFIYRDLKPENILLHESGHIMLSDFD 354
                  467788888.77888889*****************************97 PP

  == domain 3  score: 11.0 bits;  conditional E-value: 6.3e-05
  Kinase-like 228 thkldaWqlGlviyriwclklPltlateeakeew.........kfklckkipekvkaLlkkfLqlsqedR 288
                  t ++d W+lG+  y +  ++ P+  +  ++  +          +++    i+   k L++k+L  +++dR
   EPX74555.1 415 TSAVDWWTLGILFYEMLYATTPFKGKNRNMTFSNilhrevvfpEYSNAPSISSLCKSLIRKLLLKDENDR 484
                  7899*******************9999888777679999999999999999999*********9999998 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -6.7   6.1         6   1.8e+04     277     277 ..     102     102 ..       8     238 .. 0.62
   2 !   15.3   0.0   2.2e-06    0.0066     314     396 ..     317     419 ..     307     434 .. 0.79

  Alignments for each domain:
  == domain 1  score: -6.7 bits;  conditional E-value: 6
  Pkinase_fungal 277 s 277
                      
      EPX74555.1 102 M 102
                     0 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 2.2e-06
  Pkinase_fungal 314 DaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddsses..gare..........................rtGTleF 380
                     ++ ++++ L+   g++ rD   +Nil+      ++ + +L+D+Dl k+ +   s    +                              +GT e+
      EPX74555.1 317 EVTAALEYLH-LMGFIYRDLKPENILLH-----ESGHIMLSDFDLSKQSGSIGSPTviQ--ArnsspssqstyaldtkscianfrtnsFVGTEEY 403
                     5667888899.89***************.....67899************876666441..2445666667777777777777777779****** PP

  Pkinase_fungal 381 maievlkgeeHsyrhD 396
                     +a ev+kg+ H+   D
      EPX74555.1 404 IAPEVIKGCGHTSAVD 419
                     ********99*98766 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0     2e-05     0.059     120     170 ..     311     357 ..     297     361 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 2e-05
         Kdo 120 krallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDldkar 170
                  +  + +v ++ + lh +g   +dl + nill++ +    +i+l D+d ++
  EPX74555.1 311 AKFYIAEVTAALEYLHLMGFIYRDLKPENILLHESG----HIMLSDFDLSK 357
                 55567889999*************************....9*****99765 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0     0.017        51      11      84 ..     221     296 ..     214     326 .. 0.77
   2 ?    7.5   0.0    0.0011       3.4     166     195 ..     328     355 ..     300     359 .. 0.73

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.017
                 CEEEEEEETT.--EE.EEEE-TT..S-HHHHHHHHHHHHHHHHTT-B--B-CTTBS-EEETTEEEEEEE----EE-SS CS
         APH  11 nrtylvttpa.gryv.lrrnppa..raaeeirrevallrlLakagvpvPevlagdtddeeigllfalieyvpgrsllr 84 
                  r+ylv +++ +r++ +++ +++     ++i r +a+   La ++ p  + l+   + +  ++l++ +ey+ g  + r
  EPX74555.1 221 GRVYLVREKKtTRFFaMKVLNKQemIKRNKIKRAFAEQEILATSNHPFIVTLY--HSFQSDEYLYLCMEYCMGGEFFR 296
                 58999999997666636666666889999999999999999999886655555..69999999999999998888887 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0011
                 EEEE-SS-SGGGEEEC..TTEEEEE---TT CS
         APH 166 tvllHgDlhpgNllvdpddgrvtGviDfed 195
                 ++++ +Dl+p N+l++ + g++  + Df++
  EPX74555.1 328 MGFIYRDLKPENILLH-ESGHI-MLSDFDL 355
                 799*************.66776.3557765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (579 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       888  (0.0495287); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.57u 0.24s 00:00:00.81 Elapsed: 00:00:00.40
# Mc/sec: 4343.84
//
Query:       EPX74556.1  [L=420]
Description: tRNA methyltransferase Trm12 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.4e-12   45.3   0.2    2.1e-11   44.0   0.0    1.7  2  Met_10    Met-10+ like-protein
  ------ inclusion threshold ------
      0.042   13.4   0.0      0.069   12.7   0.0    1.3  1  MTS       Methyltransferase small domain


Domain annotation for each model (and alignments):
>> Met_10  Met-10+ like-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.0   0.0   2.3e-15   2.1e-11      80     153 ..     225     298 ..     205     331 .. 0.85
   2 ?   -2.7   0.0      0.45     4e+03      15      40 ..     373     398 ..     361     405 .. 0.71

  Alignments for each domain:
  == domain 1  score: 44.0 bits;  conditional E-value: 2.3e-15
                 TS---GGGHHHHHHHHTT.--TT-EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCE CS
      Met_10  80 kvyfsskleaErerlakl.veegevVvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkvekvv 153
                   +fs++++ E++r+ k     +ev+ d++AGiG+f+ +  k +kak v+  ++nP sv+ l+++   N+ +  +
  EPX74556.1 225 YTMFSRGNSVEKARVLKFnNISNEVIADLYAGIGYFSFSYVK-GKAKSVFCWEINPWSVEALRRAAIANNWSVCI 298
                 579**************95669*******************9.*******************9987777665554 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.45
                 -TTSSHHHHHHHHHHHHHSS-SCEEE CS
      Met_10  15 reelkeykkvigevildktkvktvlr 40 
                 ++++++y ++i  +  +k  ++t ++
  EPX74556.1 373 EDRIEKYGEEINSAFTNKLGIQTTYQ 398
                 56777788888888888888887664 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   7.7e-06     0.069      27      86 ..     242     301 ..     224     321 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 7.7e-06
                 CHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC.EEEEE CS
         MTS  27 lpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle.vevva 86 
                 +++  ++ ++Dl +G+G+ + +  k + + +v + +++  ++e+ ++ + an+ + + v++
  EPX74556.1 242 FNNISNEVIADLYAGIGYFSFSYVKGKAK-SVFCWEINPWSVEALRRAAIANNWSvCIVRH 301
                 444456779**************997777.8*********************999444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (420 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       531  (0.0296168); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.57
# Mc/sec: 2206.27
//
Query:       EPX74557.1  [L=476]
Description: tRNA methyltransferase Trm2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.9e-22   79.2   0.0    3.4e-18   65.8   0.2    3.1  2  tRNA_U5-meth_tr  tRNA (Uracil-5-)-methyltransferase
      2e-08   34.1   0.0    3.9e-08   33.2   0.0    1.5  1  TRAM             TRAM domain
    8.7e-08   32.1   0.0    1.8e-07   31.1   0.0    1.5  1  Methyltransf_31  Methyltransferase domain
      4e-07   30.7   0.0    9.9e-07   29.4   0.0    1.7  1  Methyltransf_25  Methyltransferase domain
    4.9e-06   26.2   0.0    7.2e-06   25.6   0.0    1.2  1  PrmA             Ribosomal protein L11 methyltransferase (Prm
    5.8e-06   26.0   0.1    1.6e-05   24.6   0.1    1.7  2  Methyltransf_15  RNA cap guanine-N2 methyltransferase
    1.9e-05   24.4   0.0    3.4e-05   23.6   0.0    1.3  1  Cons_hypoth95    Conserved hypothetical protein 95
     0.0001   22.1   0.0    0.00021   21.1   0.0    1.5  1  Met_10           Met-10+ like-protein
    0.00016   21.2   0.0    0.00039   19.9   0.0    1.6  1  Methyltransf_4   Putative methyltransferase
    0.00032   21.3   0.0    0.00095   19.8   0.0    1.8  1  Methyltransf_11  Methyltransferase domain
    0.00051   19.9   0.0    0.00094   19.1   0.0    1.4  1  Methyltransf_23  Methyltransferase domain
      0.003   17.1   0.0     0.0054   16.3   0.0    1.3  1  MTS              Methyltransferase small domain
     0.0053   17.5   0.0      0.012   16.3   0.0    1.6  1  Methyltransf_12  Methyltransferase domain
  ------ inclusion threshold ------
      0.067   12.5   0.0       0.12   11.7   0.0    1.3  1  Ubie_methyltran  ubiE/COQ5 methyltransferase family


Domain annotation for each model (and alignments):
>> tRNA_U5-meth_tr  tRNA (Uracil-5-)-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0    0.0016         2       2      90 ..     148     248 ..     147     259 .. 0.67
   2 !   65.8   0.2   2.6e-21   3.4e-18     200     356 ..     324     474 ..     285     475 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0016
  tRNA_U5-meth_tr   2 yeaqleekksrlkkllaefeapel....ev...fesp.eehyrlra..efrlwhe.eddlyyimfdqktk.kkirvdefdaaselinelmkall 83 
                      ye+ql++kk+ ++k+++ f+  ++    +v     sp +  yr++    f + +   +    i f++k + + + ++e ++a ++ine  ++++
       EPX74557.1 148 YEKQLQQKKKVIEKAFRYFSKLDPsklpQVestVGSPlQYNYRTKItpHFDVPKGgTNGPLTIGFQEKGRrRVLDIEECPIATKKINESYPKII 241
                      899***********9999987654111122111234423357765422577777633334566776666615667******************9 PP

  tRNA_U5-meth_tr  84 aalkqde 90 
                       ++++ +
       EPX74557.1 242 GEVQDRA 248
                      9997765 PP

  == domain 2  score: 65.8 bits;  conditional E-value: 2.6e-21
  tRNA_U5-meth_tr 200 eskgdllelycGnGnfslalarnfekvlateiakssveaaqyniaankidnvqiirlsaeeltealkkkrefrrlkgidlksyafetifvdPPr 293
                      ++ + +++ ycG G fs+a ++ f  v+  ei+  sv+ a+ n + n++ n ++i   ae + ++++              s    +++vdPPr
       EPX74557.1 324 QKPKYFVDAYCGSGLFSVACSEGFDSVIGVEISADSVHYAKENAQRNNVSNTNFIVGEAEKIFSSIETP------------SA-ETAMVVDPPR 404
                      455567899**********************************************99999876665543............33.35678***** PP

  tRNA_U5-meth_tr 294 aGldketvklvkky..erilyiscnPetlkenl.....eelsethrverlalfdqfpythhlesGvllek 356
                       G d+  ++ + +y   r++yiscn +t + ++     +el +  +++++  fd fp +hh+es + l+k
       EPX74557.1 405 KGCDQVFLNQLLEYgpSRVVYISCNVHTQARDVgyilhHELGKNFKIDEIRGFDLFPQSHHVESILTLTK 474
                      ********9999994459***********999744444578999********************998876 PP

>> TRAM  TRAM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.2   0.0     3e-11   3.9e-08       3      62 .]      59     116 ..      57     116 .. 0.92

  Alignments for each domain:
  == domain 1  score: 33.2 bits;  conditional E-value: 3e-11
                 XXXXEEEEEEEEE-.TTSEEEEEET..TEEEEETT--T..TEEEEEEEEEE-SSEEEEEEE CS
        TRAM   3 yvGstqeVlveglsksegegiGrtdn.gkvvfvpgdlpgIGdfVeVkItkvkrqyLrGell 62 
                 ++ +++eV +  ls s g+giG + +  ++v+vp+ lp  Gd+V++k +   + y+ +++l
  EPX74557.1  59 ERFQEIEVDIVYLS-SSGDGIGLVLEgRYAVVVPFSLP--GDRVKAKLHFLAETYALADFL 116
                 678***********.********98857789*******..****************99976 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.1   0.0   1.4e-10   1.8e-07       4      69 ..     326     388 ..     324     447 .. 0.76

  Alignments for each domain:
  == domain 1  score: 31.1 bits;  conditional E-value: 1.4e-10
  Methyltransf_31   4 glrvlDlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaqklgldnveFeqgdieelekl 69 
                       ++++D+ CG+G ++ +   e ++   v+G++is++++ +A+enaq+++++n +F +g++e++ ++
       EPX74557.1 326 PKYFVDAYCGSGLFSVACS-EGFD--SVIGVEISADSVHYAKENAQRNNVSNTNFIVGEAEKIFSS 388
                      56789999***99998888.4332..49********************************995434 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4   0.0   7.8e-10   9.9e-07       2      58 ..     330     385 ..     329     402 .. 0.89

  Alignments for each domain:
  == domain 1  score: 29.4 bits;  conditional E-value: 7.8e-10
                      EEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTT.TEEEEESBCCGB CS
  Methyltransf_25   2 LdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeegl.nvefvqgdaedl 58 
                      +d+ cG+G ++ a+++ +   +v+gv+is++ + +a+e+a+++++ n +f++g+ae++
       EPX74557.1 330 VDAYCGSGLFSVACSEGF--DSVIGVEISADSVHYAKENAQRNNVsNTNFIVGEAEKI 385
                      6888***********999..9**********************************985 PP

>> PrmA  Ribosomal protein L11 methyltransferase (PrmA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.0   5.6e-09   7.2e-06     160     217 ..     324     381 ..     318     400 .. 0.83

  Alignments for each domain:
  == domain 1  score: 25.6 bits;  conditional E-value: 5.6e-09
        PrmA 160 kegeevlDvGtGSGiLaiaaakLgakkvvavDiDevAvkvakeNaelNkvea.kleval 217
                 ++ + ++D  +GSG+ ++a +  g ++v++v i   +v+ akeNa++N+v++ ++ v  
  EPX74557.1 324 QKPKYFVDAYCGSGLFSVACSE-GFDSVIGVEISADSVHYAKENAQRNNVSNtNFIVGE 381
                 5567789***********9987.***************************997775533 PP

>> Methyltransf_15  RNA cap guanine-N2 methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       3.7   4.7e+03      66      83 ..      60      77 ..      54      87 .. 0.78
   2 !   24.6   0.1   1.2e-08   1.6e-05       3      83 ..     328     406 ..     326     415 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 3.7
  Methyltransf_15 66 klekikvdlvflSpPwGG 83
                     ++++i+vd+v+lS    G
       EPX74557.1 60 RFQEIEVDIVYLSSSGDG 77
                     7889999***99976555 PP

  == domain 2  score: 24.6 bits;  conditional E-value: 1.2e-08
  Methyltransf_15   3 vilDlfsGaGGnviqfalvfekviaieinleklacaqhNaevYgvsdkitlvlgdvfellaklklekikvdlvflSpPwGG 83 
                      + +D+++G+G  +++  + f++vi++ei+ + +  a++Na+  +vs+   +++g+ +++++++++ ++++ +v+  pP  G
       EPX74557.1 328 YFVDAYCGSGLFSVACSEGFDSVIGVEISADSVHYAKENAQRNNVSN-TNFIVGEAEKIFSSIETPSAETAMVV-DPPRKG 406
                      789****************************************9986.58999************999766665.566555 PP

>> Cons_hypoth95  Conserved hypothetical protein 95
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   0.0   2.6e-08   3.4e-05      26     125 ..     308     406 ..     298     440 .. 0.82

  Alignments for each domain:
  == domain 1  score: 23.6 bits;  conditional E-value: 2.6e-08
                    HHHHHHHHHHHCCC..HCC-EEEETT-TTSHHHHHHHHTT-SEEEEEES-HHHHHHHHHHHCCCT--TTTEEEEES-HHHHCTS--SS-EEEEEEE CS
  Cons_hypoth95  26 drvrealFnilaae..iegarvLDlfaGsGalglEAlSRgakkavlvekdkeavkilkenleelkleeetaelkedaleallklakkkeefdivfl 119
                      vr+ l n  ++e   + + ++D ++GsG  ++ A S g ++++ ve ++  v+  ken ++ ++++ t+ ++ +a++ +++    +       +
     EPX74557.1 308 GYVRKQLLNPFGHEnyQKPKYFVDAYCGSGLFSV-ACSEGFDSVIGVEISADSVHYAKENAQRNNVSN-TNFIVGEAEKIFSSIETPS-AETAMVV 400
                    569999999998887788899*********8887.99****************************997.8888888888888875555.5577779 PP

                    --SSST CS
  Cons_hypoth95 120 DPPyak 125
                    DPP + 
     EPX74557.1 401 DPPRKG 406
                    ***654 PP

>> Met_10  Met-10+ like-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0   1.7e-07   0.00021     102     153 ..     327     376 ..     320     418 .. 0.84

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 1.7e-07
                 -EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCE CS
      Met_10 102 evVvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkvekvv 153
                 +  vd + G G f+++++       v+++++  +sv+y ken ++N+v+++ 
  EPX74557.1 327 KYFVDAYCGSGLFSVACSE--GFDSVIGVEISADSVHYAKENAQRNNVSNTN 376
                 56799*************8..5556***********************9974 PP

>> Methyltransf_4  Putative methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   3.1e-07   0.00039       4      70 ..     328     391 ..     325     402 .. 0.82

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 3.1e-07
                     EEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHHHHHCTTSSEEEEES-CCCHHHHCS-T CS
  Methyltransf_4   4 vvleiGcGkGeflvalAkknPdknflGiEirvkvvakvlkkiealelkNlrilrgdalkvllelled 70 
                      +++  cG+G f va ++ +   +++G+Ei+ ++v+++ +++++++++N + + g+a k++ +++e+
      EPX74557.1 328 YFVDAYCGSGLFSVACSEGF--DSVIGVEISADSVHYAKENAQRNNVSNTNFIVGEAEKIF-SSIET 391
                     57888899999988777766..689********************************6655.55554 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   7.4e-07   0.00095       3      55 ..     332     385 ..     330     396 .. 0.92

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 7.4e-07
                      ET-TTSHHHHHHHHTTSEEEEEES-HHHHHHHHHHCCHHT-.EEEETTEECCCT CS
  Methyltransf_11   3 vGcGtGrlaealakrgarvvgvDlskemlklakekaseegl.kvefvvadaekl 55 
                      + cG+G+++ a+ + + +v+gv++s+  + +ake+a+++++ + +f+v++aek+
       EPX74557.1 332 AYCGSGLFSVACSEGFDSVIGVEISADSVHYAKENAQRNNVsNTNFIVGEAEKI 385
                      55***********888***********************99*999******985 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0   7.3e-07   0.00094      18     125 ..     321     450 ..     307     472 .. 0.75

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 7.3e-07
  Methyltransf_23  18 pklraggrvLdiGcGtGillevlrengfsvtgvDlspeaveiae.........................kakkaqkdqfdeqeaaepqgkfdlI 86 
                      ++ ++++  +d  cG+G ++  ++e + sv+gv++s   v+ a+                         +    ++  + ++  ++p + +d +
       EPX74557.1 321 ENYQKPKYFVDAYCGSGLFSVACSEGFDSVIGVEISADSVHYAKenaqrnnvsntnfivgeaekifssiE---TPSAET-AMVVDPPRKGCDQV 410
                      3458999999*******99999987777**********99999887777766666666666655543221...111111.245666999***** PP

  Methyltransf_23  87 vlrevlehvpdppellrq.iatllkpgGylllseplaslk 125
                       l+++le  p+   ++++ ++t  ++ Gy+l++e +++ k
       EPX74557.1 411 FLNQLLEYGPSRVVYISCnVHTQARDVGYILHHELGKNFK 450
                      ***********9999996378888888*******999874 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   4.2e-06    0.0054      34      94 ..     328     390 ..     313     414 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 4.2e-06
                 EEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC.EEEE...E-STTTTST CS
         MTS  34 kvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle.vevv...asdvleeve 94 
                   +D  cG G+ ++a+ +  ++  v  v+++a +++ aken+++n+++ ++++   a+ +++ +e
  EPX74557.1 328 YFVDAYCGSGLFSVACSEGFDS--VIGVEISADSVHYAKENAQRNNVSnTNFIvgeAEKIFSSIE 390
                 579999***********98888..99*********************985554111344455555 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   9.4e-06     0.012       5      78 ..     334     418 ..     330     431 .. 0.83

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 9.4e-06
  Methyltransf_12   5 cGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvelealdlldldgg.............ssfDlvvasnvlhh 78 
                      cG+G ++ a+ e   + +++gv+is+++++ ake  ++++  n+n++  ea+ ++++ +              +  D v+++++l++
       EPX74557.1 334 CGSGLFSVACSEG--FDSVIGVEISADSVHYAKENAQRNNVSNTNFIVGEAEKIFSSIETpsaetamvvdpprKGCDQVFLNQLLEY 418
                      9*******99999..9*************7777777777777777777777777766666999999999999999999999999988 PP

>> Ubie_methyltran  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   9.2e-05      0.12      44     110 ..     322     385 ..     313     396 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 9.2e-05
                      -S--TTEEEEES-TT-HHHHHHHHHHHHHHEEEEEES-HHHHHHHHHHHHHHTSSTEEEEE--TTT- CS
  Ubie_methyltran  44 avkrgakvlDvagGtgDlafklsdsvgekgkvvvlDinenmLkvgekklkeegkinieflqanaeeL 110
                      + ++++ ++D  +G+g ++++ s+  +    v++++i+++ ++ +++ ++++ ++n +f++++ae++
       EPX74557.1 322 NYQKPKYFVDAYCGSGLFSVACSEGFD---SVIGVEISADSVHYAKENAQRNNVSNTNFIVGEAEKI 385
                      5678899*********99999888766...599*******************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (476 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       468  (0.026103); expected 358.6 (0.02)
Passed bias filter:                      426  (0.0237604); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.55u 0.29s 00:00:00.84 Elapsed: 00:00:00.46
# Mc/sec: 3089.00
//
Query:       EPX74558.1  [L=516]
Description: ARS-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.5e-47  158.9   3.3    1.5e-46  158.2   0.5    2.5  3  DDE_1        DDE superfamily endonuclease
    2.1e-22   78.6   3.8    4.8e-22   77.4   3.8    1.7  1  HTH_ABP1_N   Fission yeast centromere protein N-terminal doma
    6.4e-17   61.4   3.3    1.3e-16   60.3   1.9    2.3  2  HTH_Tnp_Tc5  Tc5 transposase DNA-binding domain
  ------ inclusion threshold ------
      0.032   13.8   0.0      0.061   12.9   0.0    1.4  1  PARP         Poly(ADP-ribose) polymerase catalytic domain
       0.06   12.9   0.4        0.1   12.1   0.4    1.4  1  4HB_MCP_1    Four helix bundle sensory module for signal tran


Domain annotation for each model (and alignments):
>> DDE_1  DDE superfamily endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.18   6.3e+02      38      73 ..      12      48 ..       4      60 .. 0.76
   2 ?   -2.5   0.0      0.98   3.5e+03      59      72 ..     128     146 ..     122     162 .. 0.66
   3 !  158.2   0.5   4.2e-50   1.5e-46       1     175 []     208     385 ..     208     385 .. 0.97

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.18
       DDE_1 38 tkkkldveyksnrkawltssifeeWL.kvfdkrleae 73
                ++kk   +y  n+  + t+s +  W+ ++fdk l ++
  EPX74558.1 12 KEKKELRNYFFNSSDKPTQSDLISWFrQRFDKDLSQP 48
                445555678888888889999999**99***998844 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.98
       DDE_1  59 feeWLkvfdkrle.....a 72 
                  + WL+ f++r +     a
  EPX74558.1 128 SNGWLENFKRRHQqfqnhA 146
                 4568888888777444433 PP

  == domain 3  score: 158.2 bits;  conditional E-value: 4.2e-50
       DDE_1   1 kerltvllcanaagsekLkplvigkaksprafkngektkkkldveyksnrkawltssifeeWLkvfdkrleaekrkilLlldssrshe.tvel...les 95 
                 k+r+t+llc na+g++kL+ + ig++++p+af+++ ++++ l+++++ n++a lt+ ++eeWL +fd +++  k k++Lll++s++   ++++    ++
  EPX74558.1 208 KARITTLLCTNATGTRKLPMWAIGYSQNPKAFRAAAIKPEVLNFHWRFNGRACLTTILIEEWLLWFDSQMQ--KGKVILLLERSTAVVcALQNlrnANR 304
                 689********************************************************************..***********998876666687899 PP

       DDE_1  96 elqniklvflPassasllqPldqgvvselKarYrrqllqalleeqnrlskeqkkltlldalkfikkAwn.avsketiksaf 175
                 +l+n+++++lP + ++ + P+d g+  +lKa Yr+++++++l++ +  ++++k++++l+a++++ kAw+ ++ +++i s+f
  EPX74558.1 305 DLKNTSVIILPGQQEKSYNPFDYGITFTLKAFYRKYWIRYMLAQIELGRNPHKTVNVLHAMRWLTKAWEiDILPASIYSSF 385
                 *****************************************************************************9988 PP

>> HTH_ABP1_N  Fission yeast centromere protein N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.4   3.8   1.3e-25   4.8e-22       1      60 [.       5      64 ..       5      65 .. 0.98

  Alignments for each domain:
  == domain 1  score: 77.4 bits;  conditional E-value: 1.3e-25
  HTH_ABP1_N  1 rRkaiskeqkkaLRawafqqnprpsqkaliaWFeqeygqkisqstvSeiLSskYayLDda 60
                rR+ai++++kk+LR++ f+ + +p+q++li+WF+q++++++sq++vS+iLSs+Y+yLD+ 
  EPX74558.1  5 RRRAITEKEKKELRNYFFNSSDKPTQSDLISWFRQRFDKDLSQPSVSQILSSRYSYLDSL 64
                89********************************************************86 PP

>> HTH_Tnp_Tc5  Tc5 transposase DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       1.5   5.5e+03       8      18 ..      33      44 ..      31      54 .. 0.63
   2 !   60.3   1.9   3.7e-20   1.3e-16       1      61 [.      79     140 ..      79     146 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1.5
                 HHHHHHHH.C-C CS
  HTH_Tnp_Tc5  8 LleWirql.rer 18
                 L+ W+rq+ ++ 
   EPX74558.1 33 LISWFRQRfDKD 44
                 677888875444 PP

  == domain 2  score: 60.3 bits;  conditional E-value: 3.7e-20
                  THHHHHHHHHHHHHHC-CT---SCHHHHHHHHHHH.HHSSSCT-TT-S--CHHHHHHHHHTS CS
  HTH_Tnp_Tc5   1 spelEkaLleWirqlrergipitgelirekAqela.slaadlgepdfkaSkgWldrFkkRhg 61 
                  +p lEk L eW ++++ ++  itge+i+e+A +l+ + +++++++++ +S+gWl++Fk+Rh+
   EPX74558.1  79 YPILEKLLFEWQQRAQSQNQVITGEAIKETASKLWkKIPEYKDLSTPEFSNGWLENFKRRHQ 140
                  789*********************************9************************4 PP

>> PARP  Poly(ADP-ribose) polymerase catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   1.7e-05     0.061      36      64 ..     138     166 ..     132     178 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.7e-05
                 HHHHCGCCGGSS-EEEEEEEE-GGGHHHH CS
        PARP  36 eaerfqekkklrnrrlLfHGsrltnvasi 64 
                  +++fq++ ++++  lLfHGs ++ v++i
  EPX74558.1 138 RHQQFQNHANKEQPYLLFHGSMVETVTRI 166
                 5789**********************998 PP

>> 4HB_MCP_1  Four helix bundle sensory module for signal transduction
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.4   2.9e-05       0.1      81     127 ..     102     148 ..      49     150 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.9e-05
   4HB_MCP_1  81 lkdieeleaeidkllekyektilteeEkelleefkeqlnaYrevrkk 127
                  ++i+e   +++k++ +y+++++ e+    le+fk+ +++++++ +k
  EPX74558.1 102 GEAIKETASKLWKKIPEYKDLSTPEFSNGWLENFKRRHQQFQNHANK 148
                 4679***************************************9886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (516 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       663  (0.0369792); expected 358.6 (0.02)
Passed bias filter:                      519  (0.0289475); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.57u 0.28s 00:00:00.85 Elapsed: 00:00:00.45
# Mc/sec: 3423.96
//
Query:       EPX74559.1  [L=271]
Description: iron ion transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.9e-37  126.5   7.5    2.9e-16   59.2   0.1    4.1  3  Mito_carr  Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.2   1.5e-06     0.027       9      95 ..       6      77 ..       3      79 .. 0.73
   2 !   59.2   0.1   1.6e-20   2.9e-16       8      95 ..      86     165 ..      81     167 .. 0.94
   3 !   49.4   0.3   1.7e-17   3.1e-13      10      90 ..     177     265 ..     171     270 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 1.5e-06
                HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr  9 llaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95
                l+a++ + +++ ++++P+d++ +  qt ++                 +++  l++ yrGl ++l+ ++pa+ l++++y   kr l++
  EPX74559.1  6 LIAASSGSVASRVICHPIDTITVHKQTVGSF---------------SFRNTPLKAYYRGLPISLTLITPATCLYMSTYVESKRRLKD 77
                5566666666666666666665555554444...............246777999***********************999998875 PP

  == domain 2  score: 59.2 bits;  conditional E-value: 1.6e-20
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   8 ellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                 + ++G++a +v+++v+tPl+v+K r q++++         ++ ++k++ k+eG++g+yrG+++ +  + p+++ ++v+ye +k++l+ 
  EPX74559.1  86 YSACGMTAEVVSSFVWTPLEVIKARTQISQHG--------VIPTIKSLQKQEGIKGFYRGYWMGIAIYLPTTVSWWVMYEETKKWLQA 165
                 5689************************9999........999******************************************986 PP

  == domain 3  score: 49.4 bits;  conditional E-value: 1.7e-17
                 HHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS........HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr  10 laGglagavatlvttPldvvKtrlqtqkksskksksaa........ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlk 90 
                 la++l+ +vat++ tPld+vKtr q++ +s+ +++  a        i dv + ++ke Gl g+ rGl+ ++  ++p+ ++ ++++e+++
  EPX74559.1 177 LASALGTVVATTISTPLDIVKTRYQVATSSAMQKTEFAnissnkikISDVARLLFKERGLGGFTRGLMFRMAYIMPSGMISMSVFESFR 265
                 78999*********************8887654443335888889*****************************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (271 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       421  (0.0234815); expected 358.6 (0.02)
Passed bias filter:                      324  (0.0180713); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.44
# Mc/sec: 1844.68
//
Query:       EPX74560.1  [L=877]
Description: leucine-tRNA ligase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.5e-59  199.3   5.9    1.3e-22   79.8   0.7    6.0  5  tRNA-synt_1    tRNA synthetases class I (I, L, M and V)
    8.8e-40  136.2   0.0    2.3e-39  134.8   0.0    1.7  1  tRNA-synt_1_2  Leucyl-tRNA synthetase, Domain 2
      2e-25   89.4   3.4    4.3e-19   68.5   0.0    4.8  5  tRNA-synt_1g   tRNA synthetases class I (M)
    8.3e-15   55.0   0.2    1.8e-14   54.0   0.2    1.5  1  Anticodon_1    Anticodon-binding domain of tRNA
     0.0084   15.1   0.8      0.012   14.5   0.0    1.6  2  tRNA-synt_1d   tRNA synthetases class I (R)
  ------ inclusion threshold ------
       0.02   14.2   0.0       0.06   12.7   0.0    1.8  2  tRNA-synt_1e   tRNA synthetases class I (C) catalytic domain
       0.11   11.9   3.8        3.1    7.3   0.3    2.5  2  zf-ribbon_3    zinc-ribbon domain


Domain annotation for each model (and alignments):
>> tRNA-synt_1  tRNA synthetases class I (I, L, M and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.8   0.7   5.2e-26   1.3e-22       2     179 ..      44     200 ..      43     204 .. 0.90
   2 !   18.0   0.4   2.8e-07   0.00071     363     414 ..     203     254 ..     200     259 .. 0.94
   3 !   50.6   0.0   3.7e-17   9.4e-14     189     352 ..     260     428 ..     254     437 .. 0.80
   4 !   34.1   0.0   3.6e-12   9.2e-09     416     557 ..     436     596 ..     427     619 .. 0.72
   5 !   12.6   0.0   1.2e-05      0.03     563     595 ..     637     670 ..     636     677 .. 0.86

  Alignments for each domain:
  == domain 1  score: 79.8 bits;  conditional E-value: 5.2e-26
  tRNA-synt_1   2 lyekWeeedvfkkelekekekkefilvdgPPyvtGslHiGhalaktlkdivirykrmkGkevlyvpGwDhaGlaiea.kvekklgakekkerkklgre 98 
                  + e+W++   f  +   e  kk+++l    Py  GslH+Gh+   t+ d++ ry+rmkG++v + +GwD  Gl+ e  ++e+++              
   EPX74560.1  44 WKEEWTKRSPFPVN---ESAKKKYVLSMF-PYPSGSLHMGHVRVYTISDTLSRYYRMKGFNVIHPMGWDAFGLPAENaAIEHHI-S------------ 124
                  67899999999888...667889999875.7*******************************************9862567766.2............ PP

  tRNA-synt_1  99 efrekvrewkaeyaeeirkqvkrlGvsvDfdreylTldkeleeavkevfvrladkgliyrgkklvnwstklktalselEve 179
                         +w +  +e++++q++ + v +D+dre +T d+++ +  +  f++l++kgl y++  lvnw++   t+l++  v+
   EPX74560.1 125 -----PNSWTKSNIEKMKHQFEYMNVHFDWDREIITCDPSYYKWSQYLFTQLFKKGLAYQADALVNWDPVDCTVLANEQVD 200
                  .....24699999***************************************************************98775 PP

  == domain 2  score: 18.0 bits;  conditional E-value: 2.8e-07
  tRNA-synt_1 363 pfcerskkpiiyrateqWfvrvkeladaalkavekvqfvpkskekryaswle 414
                  + ++rs+++++ +   qWf ++++  +++lk +e+  f p++ +k+ ++w+ 
   EPX74560.1 203 GRSWRSGAVVEKKNLCQWFFKISDYSEQLLKDLESLPFWPEKVKKMQQNWIG 254
                  568***********************************************96 PP

  == domain 3  score: 50.6 bits;  conditional E-value: 3.7e-17
  tRNA-synt_1 189 hvafpladkeevklviaTTtPeTllgdtavavnpeldyvitkeklilaeallkslvkke.sekkiledergkeLegk...evelplvnrkipiiaddy 282
                  +++f+   +++ +l+++TT+PeT+++   + + +              + l++s ++k+ + ++ le   ++++  k    + +pl+n +ip+    y
   EPX74560.1 260 EIQFK--TDKNYTLEVYTTRPETIFASAFLGLSKS-------------HPLVQSQAEKHgDLSTFLESDDANNFGFKlpiVAYNPLTNASIPVYYAPY 342
                  44554..555567********************99.............678888888885666899988888887763335779************** PP

  tRNA-synt_1 283 vdkeaGtGvVkiaPahdedDyevgkkynl................evinildedgtlteeaaefeglkvfdarkkvveelkekgll 352
                  v  e GtGvV   P hd  D++ ++++++                +  ++ + +g ++e ++e++g+k ++a k ++++l+  g  
   EPX74560.1 343 VVDEHGTGVVMGVPMHDLRDFNFATENGIsfpsvnavlpqnsetvNNETPYTGNGLMSEICGEYKGMKNKEAAKLMTKKLESLGIA 428
                  *****************************88776666665553333333555566666666********************99975 PP

  == domain 4  score: 34.1 bits;  conditional E-value: 3.6e-12
  tRNA-synt_1 416 iqdWciSRqrwWGhriplfvsketeevvvre.elk....elvagreeeeaekkalekeakdklkkekgelekdedvlDvWFsSgswpfstlgypee.. 506
                   +dW +SRqr+WG++ip+   ++ + v v e el     el+    + ++  ++le+ +k +  + k+  ++++d++D+  +S+  +f  l++ ++  
   EPX74560.1 436 LRDWLVSRQRFWGTPIPIVHCDNCGAVPVPEhELPvqlpELTDIYGKGSSPLANLESWVKTDCPQCKKPSRRETDTMDTFVDSSWYFFRFLDSKNNkl 533
                  68*********************999887553433101122332233333344555555666677788899*****************9999876644 PP

  tRNA-synt_1 507 ..dteelkkffpadmlleGlDiirgWvarlillslaltgse..........Pfkevlvhglvr 557
                    d ++++k  p d+++ G+      +  + ++s  +++            Pf++++++g+v 
   EPX74560.1 534 pfDPKKIEKDMPVDIYIGGIEHSILHLLYSRFFSKVMNDIGlwknsnlknePFTRLITQGMVH 596
                  44578999************9766555544444444433323333366777999999999985 PP

  == domain 5  score: 12.6 bits;  conditional E-value: 1.2e-05
  tRNA-synt_1 563 KmSKslgNvidpldvikkygadalRltli.lsdv 595
                  KmSKs+ N +dp++ i + g d+ R  l+ +++v
   EPX74560.1 637 KMSKSKHNGVDPISTILRWGSDVTRAHLLfSAPV 670
                  9*************************99945544 PP

>> tRNA-synt_1_2  Leucyl-tRNA synthetase, Domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.8   0.0   9.1e-43   2.3e-39       1     185 []     250     423 ..     250     423 .. 0.90

  Alignments for each domain:
  == domain 1  score: 134.8 bits;  conditional E-value: 9.1e-43
  tRNA-synt_1_2   1 rnWIGrseGleiefkveeseeklevfttrpdtlfGvtfvalapehplveklaekkkelaafieevkkksesereletkekeGvftglkaihPitge 96 
                    +nWIG+s+Glei+fk +++  +lev+ttrp+t+f   f+ l+++hplv++ aek+ +l++f+e+            ++++ G++  + a +P+t+ 
     EPX74560.1 250 QNWIGKSKGLEIQFKTDKNY-TLEVYTTRPETIFASAFLGLSKSHPLVQSQAEKHGDLSTFLESD-----------DANNFGFKLPIVAYNPLTNA 333
                    6***************9986.9***************************************9752...........34468*************** PP

  tRNA-synt_1_2  97 kipiwvanyvlmeygtgavmavPahdqrDfeFakkynlpikqvikpedeekkleeseeayteegilvns.gefdglkskeakekiakkle 185
                    +ip++ a yv+ e gtg+vm+vP hd rDf+Fa++ ++ +  v +   +++++ ++e+ yt++g + +  ge++g+k+kea + ++kkle
     EPX74560.1 334 SIPVYYAPYVVDEHGTGVVMGVPMHDLRDFNFATENGISFPSVNAVLPQNSETVNNETPYTGNGLMSEIcGEYKGMKNKEAAKLMTKKLE 423
                    *************************************88777655444444445579**********9726************9999985 PP

>> tRNA-synt_1g  tRNA synthetases class I (M)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.5   0.0   1.7e-22   4.3e-19       2     136 ..      64     200 ..      63     204 .. 0.94
   2 !    9.7   0.4   0.00012      0.31     169     236 ..     205     272 ..     201     283 .. 0.77
   3 !    3.6   0.0    0.0088        23     216     238 ..     430     452 ..     399     461 .. 0.77
   4 ?   -1.7   0.0      0.35     9e+02     133     150 ..     492     509 ..     487     514 .. 0.79
   5 !    3.7   0.0    0.0081        21     327     360 ..     637     670 ..     630     681 .. 0.88

  Alignments for each domain:
  == domain 1  score: 68.5 bits;  conditional E-value: 1.7e-22
                   EEEE--B--SS---HHHHHHHHHHHHHHHHHHHTT-EEEEEEEE---SHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHHTT---S..EEEETTSHHH CS
  tRNA-synt_1g   2 lvttalpYangklHlGhllevisaDifaRykrlrgeevlfvcgtDehGtpielkAekegvtpeelvekvheeikelfkklnisfd..kygrttseeh 96 
                   +v + +pY++g+lH+Gh++ + ++D ++Ry r++g +v++  g D++G p e +A ++ ++p+  ++++ e++k++f+ +n++fd    + t + + 
    EPX74560.1  64 YVLSMFPYPSGSLHMGHVRVYTISDTLSRYYRMKGFNVIHPMGWDAFGLPAENAAIEHHISPNSWTKSNIEKMKHQFEYMNVHFDwdREIITCDPSY 160
                   677889****************************************************************************9972256779***** PP

                   HHHHHHHHHHHHHTT-EEEEEEEEEEETTTTEEE-GGG-E CS
  tRNA-synt_1g  97 kelvqeifkklkekgliyekeieqlycpkderflpdryve 136
                   ++ +q +f++l +kgl y+ +  + ++p d + l++++v+
    EPX74560.1 161 YKWSQYLFTQLFKKGLAYQADALVNWDPVDCTVLANEQVD 200
                   ***********************************99987 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00012
                   ........EEE.EEEEEE-GGGGHHHHHHHH.HH-TTSHHHHHHHH.HHHHT----EE-E..SS-SSS-E CS
  tRNA-synt_1g 169 saisgskpevketehlffklskfekklkewieeeekeleenvkkivkewlkegLkdlais..rdldwGip 236
                   s  sg+  e k+  ++ffk+s+++++l + + e+ + ++e+vkk+ ++w+ +  k l i   +d ++ ++
    EPX74560.1 205 SWRSGAVVEKKNLCQWFFKISDYSEQLLKDL-ESLPFWPEKVKKMQQNWIGK-SKGLEIQfkTDKNYTLE 272
                   556777788888999****************.88889*************65.34444433366666555 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.0088
                   HHHHT----EE-ESS-SSS-EET CS
  tRNA-synt_1g 216 ewlkegLkdlaisrdldwGipvP 238
                    + k  L+d+ +sr+  wG p+P
    EPX74560.1 430 FVTKYKLRDWLVSRQRFWGTPIP 452
                   445779****************9 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 0.35
                   GG-EE........-TTS- CS
  tRNA-synt_1g 133 ryvegtCPkckseeargd 150
                   + v+  CP+ck+ + r++
    EPX74560.1 492 SWVKTDCPQCKKPSRRET 509
                   67999******8877664 PP

  == domain 5  score: 3.7 bits;  conditional E-value: 0.0081
                   -----------HHHHHHHH-HHHHHHHHHHHS-T CS
  tRNA-synt_1g 327 KlSkSrgvvvkakealerldadllRYylaaeape 360
                   K+SkS++++v++  ++ r  +d+ R  l+ +ap 
    EPX74560.1 637 KMSKSKHNGVDPISTILRWGSDVTRAHLLFSAPV 670
                   9************************999887765 PP

>> Anticodon_1  Anticodon-binding domain of tRNA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.0   0.2   7.1e-18   1.8e-14       4     146 ..     719     837 ..     717     843 .. 0.84

  Alignments for each domain:
  == domain 1  score: 54.0 bits;  conditional E-value: 7.1e-18
  Anticodon_1   4 ilselnklvkevteayee.yrfnkaasalyeffwndlcdwylelvkprlysesaedkraaqevllevletllrllaPfmPfitEelwqreeeelgkke 100
                  +l +++++   ++++ye+ +++n ++s+ +++ +n++   y  l k+       ++k    e+l++ +e l+r++aP++P ++ elw    ++lg+k+
   EPX74560.1 719 LLEQTYDYMVACEKNYENiFSLNVIISDSMKL-TNAI---YNSL-KDNA-----SPK----EALKTSAEVLVRCIAPIVPCVSSELW----NHLGHKN 798
                  8999***************************6.6656...4443.4443.....344....89************************....9****** PP

  Anticodon_1 101 simlaewpe.kaeelekeleeeevellkeivkairklrselkikpss 146
                  s+ + +wp+ ++   +k++    v++    v++++k r +lki+ +s
   EPX74560.1 799 SV-YTNWPSmQKPSITKKR----VSV---PVQINGKWRLQLKISSDS 837
                  **.889**86665555554....666...9*************9876 PP

>> tRNA-synt_1d  tRNA synthetases class I (R)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   4.8e-06     0.012      32     114 ..      73     153 ..      54     168 .. 0.78
   2 ?   -3.3   0.3       1.3   3.2e+03      94     152 ..     698     756 ..     692     760 .. 0.67

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 4.8e-06
                   TS--BHHHHHHHHHHHHHHHHHHHCT-EEEEEE--B-SSTCHHHHH..HHHHHHTTTTTTS-----SCCCHHHHHHHHCCCSHCC CS
  tRNA-synt_1d  32 akemhvGhLrstiiGdavsrlleflGydvirlnhvGDWGtqfGlLi..aylekkqdekllqeqelqdLeafykeakkdydeeeif 114
                   +  +h+Gh+r   i d++sr + + G++vi       W   fGl +  a +e++   +  ++ +++++++ ++ ++ ++d + ++
    EPX74560.1  73 SGSLHMGHVRVYTISDTLSRYYRMKGFNVIH---PMGWD-AFGLPAenAAIEHHISPNSWTKSNIEKMKHQFEYMNVHFDWDREI 153
                   4679*************************95...34574.588875447788888888888999999999999999999988765 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.3
                   --SCCCHHHHHHHHC.CCSHCCCHHHHHHHHHHHCT-HHHHHHHHHHHHHHHHHHHHHHH CS
  tRNA-synt_1d  94 lqdLeafykeakkdy.deeeifaerarnyvvkLqsgdedirklwkllvditrtelqklyd 152
                   +q++e+  + a  ++ d+  ++ e+ ++y+v  +++ e+i  l   + d ++   + +y+
    EPX74560.1 698 IQQMEQSSVSATSEMnDKTLELLEQTYDYMVACEKNYENIFSLNVIISDSMKL-TNAIYN 756
                   66666655555555414555688999999999999999988887777776655.555555 PP

>> tRNA-synt_1e  tRNA synthetases class I (C) catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   2.3e-05      0.06      22     125 ..      75     181 ..      57     221 .. 0.78
   2 ?   -4.1   0.0       3.1     8e+03     245     262 ..     629     646 ..     619     664 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 2.3e-05
                   --BHHHHHHHHHHHHHHHHHHHTT-EEEEEEEBB--SHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHHTT----SB--BGG...GGHHHHHHHHHHH CS
  tRNA-synt_1e  22 ashlGhaRslvafDilrrilqalgYdvqfvqnvtDidDkiikrareeeksvkelaekfieefkkdleaLnvlkptleprvs...ekvdeiielvekl 115
                     h+Gh+R + + D l r+ +++g++v +            + a e++ s +++++  ie++k+++e +nv+    +  ++    + +    l  +l
    EPX74560.1  75 SLHMGHVRVYTISDTLSRYYRMKGFNVIHPMGWDAFGLPAENAAIEHHISPNSWTKSNIEKMKHQFEYMNVHFDWDREIITcdpSYYKWSQYLFTQL 171
                   68*************************9999988888888899999999999999999999999999999986433322221114555555667788 PP

                   HHTTSEEE-T CS
  tRNA-synt_1e 116 iekgyaYavs 125
                    +kg aY+++
    EPX74560.1 172 FKKGLAYQAD 181
                   8888888877 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 3.1
                   --EEETTBE--TTTT--- CS
  tRNA-synt_1e 245 ghlkiegekmsksLknfi 262
                   + +++   kmsks +n +
    EPX74560.1 629 DEVELCYFKMSKSKHNGV 646
                   556666679999999966 PP

>> zf-ribbon_3  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.3    0.0012       3.1       3      12 ..     454     464 ..     453     467 .. 0.83
   2 ?    5.1   0.3    0.0062        16       4      15 ..     497     507 ..     494     510 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0012
  zf-ribbon_3   3 vrCPnCGa.pl 12 
                  v+C nCGa p+
   EPX74560.1 454 VHCDNCGAvPV 464
                  79*****9776 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.0062
  zf-ribbon_3   4 rCPnCGaplssd 15 
                   CP+C++p s +
   EPX74560.1 497 DCPQCKKP-SRR 507
                  6******8.655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (877 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       651  (0.0363099); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.73u 0.28s 00:00:01.01 Elapsed: 00:00:00.48
# Mc/sec: 5441.42
//
Query:       EPX74561.1  [L=182]
Description: SNARE Gos1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      1e-16   61.0   0.4      1e-16   61.0   0.4    2.4  3  V-SNARE_C  Snare region anchored in the vesicle membrane C-te
  ------ inclusion threshold ------
      0.099   13.1   2.7       0.23   12.0   0.1    2.6  2  BMFP       Membrane fusogenic activity
       0.14   12.5   2.4        6.4    7.1   0.4    2.2  2  DUF1722    Protein of unknown function (DUF1722)
       0.18   11.9   6.8       0.22   11.6   6.8    1.1  1  7TMR-HDED  7TM-HD extracellular


Domain annotation for each model (and alignments):
>> V-SNARE_C  Snare region anchored in the vesicle membrane C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.1       0.3   1.3e+03      19      30 ..      36      47 ..      27      63 .. 0.82
   2 ?   -2.4   0.0       1.3     6e+03       5      20 ..      58      73 ..      54      75 .. 0.64
   3 !   61.0   0.4   2.3e-20     1e-16       2      66 .]      96     160 ..      95     160 .. 0.97

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.3
   V-SNARE_C 19 etisiGaailed 30
                ++++++++++ed
  EPX74561.1 36 QLLEQAISTIED 47
                467788888876 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.3
   V-SNARE_C  5 resdrlknShrivdet 20
                 + drlk+ ++++ ++
  EPX74561.1 58 SHLDRLKRDENLMKRV 73
                4557788777777766 PP

  == domain 3  score: 61.0 bits;  conditional E-value: 2.3e-20
   V-SNARE_C   2 rllresdrlknShrivdetisiGaailedLhsQretLkrarsklhnvanrlgksnsiLrsikrRv 66 
                 ++l+e ++l+nS+r+++e+++++ a++ed+ +Q ++L+++ ++++ va +++++n++Lr+ k R+
  EPX74561.1  96 YELQEANSLDNSIRGTNELLERALATREDFEYQSSVLQSVSDRVNRVALTIPFINQVLRKTKSRK 160
                 699*********************************************************99885 PP

>> BMFP  Membrane fusogenic activity
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.2      0.21   9.3e+02      19      37 ..      25      39 ..       8      67 .. 0.56
   2 ?   12.0   0.1   5.2e-05      0.23      45      66 ..     119     140 ..     110     146 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.21
        BMFP 19 paaagvreeieknvravlq 37
                ++a ++ ee     r+ l+
  EPX74561.1 25 NQAEKLLEER----RQLLE 39
                3333332222....22222 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 5.2e-05
        BMFP  45 LVtREEFdvqrevlartrekle 66 
                 L tRE+F+ q+ vl+   ++++
  EPX74561.1 119 LATREDFEYQSSVLQSVSDRVN 140
                 88*************9998876 PP

>> DUF1722  Protein of unknown function (DUF1722)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.4    0.0014       6.4       1      54 [.       2      54 ..       2      74 .. 0.87
   2 ?    5.3   0.1    0.0051        23       8      60 ..      85     137 ..      83     144 .. 0.90

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0014
     DUF1722  1 KyllmahsqkeyrelgrlvanakkepleelaeeYeellmealskpatrkkhinv 54
                K +l+  s k+  + ++++ +  +++ e+l+ee ++ll++a+s+     +h +v
  EPX74561.1  2 KSMLLRDSVKKASQFQKVLHKDPNQA-EKLLEERRQLLEQAISTIEDDDSHSKV 54
                568899999999*******9999876.*****************9999999988 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.0051
     DUF1722   8 sqkeyrelgrlvanakkepleelaeeYeellmealskpatrkkhinvlqhilg 60 
                 + +++++++++ + ++ ++l++ +   +ell++al+++   + +  vlq + +
  EPX74561.1  85 NTENVKAMENMYELQEANSLDNSIRGTNELLERALATREDFEYQSSVLQSVSD 137
                 6678999999*999**********************************98865 PP

>> 7TMR-HDED  7TM-HD extracellular
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   6.8   4.8e-05      0.22      32     161 ..      13     153 ..       6     175 .. 0.61

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 4.8e-05
   7TMR-HDED  32 arsvppvydldpevteqvrqelenllee.leelra...tseenlselieqlkqarekyaqagaelsdeelrallelsdeeleelqq............. 113
                 a++ ++v+  dp+++e++ +e ++lle+ ++++++    s+ +l++ +++lk+  +  ++    ls+e+ +a l+ + e+ +++++             
  EPX74561.1  13 ASQFQKVLHKDPNQAEKLLEERRQLLEQaISTIEDddsHSKVSLQSHLDRLKRDENLMKR---VLSNEVSSAGLD-NTENVKAMENmyelqeansldns 107
                 567789*********************954445545555566666667777666666644...445555554444.23444444443334445555556 PP

   7TMR-HDED 114 ..gieqilerilsqgiped....eearekvkeqlqaalseearelatkllssvl 161
                   g+ ++ler+l+   +ed    + + ++v++++      +  +l + ++++vl
  EPX74561.1 108 irGTNELLERALAT--REDfeyqSSVLQSVSDRV------NRVALTIPFINQVL 153
                 66999999999977..444333322222222222......22233334555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1649  (0.0919739); expected 358.6 (0.02)
Passed bias filter:                      664  (0.037035); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 1207.03
//
Query:       EPX74562.1  [L=255]
Description: F1-F0 ATPase assembly protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.2e-40  139.4   0.2    1.7e-40  138.9   0.2    1.2  1  ATP-synt_10  ATP10 protein


Domain annotation for each model (and alignments):
>> ATP-synt_10  ATP10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.9   0.2   9.7e-45   1.7e-40      16     252 ..      35     243 ..      27     248 .. 0.88

  Alignments for each domain:
  == domain 1  score: 138.9 bits;  conditional E-value: 9.7e-45
  ATP-synt_10  16 eltrpiGldkppsknentskkyslgnslkdlfdeektekrrkeLeeelkksyfydlkefrktnGKlFlspksyfkadkalyfPnlvGktLasskeqsl 113
                  +l  piGl+++p  ++ tsk+ +              ++r+ ++ +e+k s++ d++e++++nGKlF sp+++fk++ +l + n+ Gk+L+ +++++l
   EPX74562.1  35 KLLTPIGLQNSPLDSTDTSKQPK-----------LTASQRQDKILREMKGSIVQDISEVQQNNGKLFYSPPRVFKKEASLWMYNFQGKSLS-GEKVNL 120
                  67778888888887433332222...........35678999*************************************************.****** PP

  ATP-synt_10 114 edvlkgkvsvVrlfssvvgeelvksyfknkeegkdylkdyeelkeenkdlQivdinlienwlKallvklslaslrkklpk.erhnkyfivsrkqlpfe 210
                  +    gk svV lf ++ ge+++k++++ +              ++ +d++++  n+++n +K +l +l+ +s++++lp+ e +++y+i     l+++
   EPX74562.1 121 YRNCLGKPSVVLLFGNSYGENQSKQWIQ-D-------------LDKISDFPVFYFNVQSNIMKYFLTRLFSGSIKSSLPSkECWSNYVIS----LNRR 200
                  ****************************.3.............35779*******************************96777*****9....5556 PP

  ATP-synt_10 211 ir.eelkinNlytGYvylvDqnlkIRWagsGnateeelellwk 252
                  +r  e++ nN ++G  +l+D+ +kIRWag G +t+eele +  
   EPX74562.1 201 LRyPEIQWNNRLVGNLFLLDETCKIRWAGTGFPTKEELERFHD 243
                  66359*********************************98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       542  (0.0302304); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 1890.50
//
Query:       EPX74563.1  [L=515]
Description: alpha-1,2-mannosyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.5e-64  218.7  41.5    1.9e-64  218.5  41.5    1.1  1  Glyco_transf_22  Alg9-like mannosyltransferase family
  ------ inclusion threshold ------
      0.061   13.5  28.3       0.28   11.4   9.5    2.5  2  PMT_2            Dolichyl-phosphate-mannose-protein mannosylt


Domain annotation for each model (and alignments):
>> Glyco_transf_22  Alg9-like mannosyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  218.5  41.5   2.1e-68   1.9e-64       2     415 ..      10     405 ..       9     407 .. 0.90

  Alignments for each domain:
  == domain 1  score: 218.5 bits;  conditional E-value: 2.1e-68
  Glyco_transf_22   2 ifllllalrlllalltqtsfdpDEffqslEva.hklvfgkgtltWEyspkygiRSylfllllalpyrllaelvadskiav...lyapRlllall 91 
                      i+ +ll +r++ ++ ++++ +pDE  qsl+++ +k++++k +l+WE++++ +iRS+++l+l++lp++  a+ ++ + + +    ++ R ++ l 
       EPX74563.1  10 IYAFLLCFRFWISQSNSYI-HPDEQLQSLQIIaGKFLNWKVELPWEFTSEEPIRSMVPLYLMLLPAFYTAKATCHEFCKPntiYLLARFTMFLW 102
                      899***********99888.***********99*********************************999988888777667767889******* PP

  Glyco_transf_22  92 salidyylfravcrkygseiakialllslsswglfvfstrtfsnslemlltsialyllsellsrenksssnekylvavlliavlavliRptsal 185
                      s++id+++ r+v  k   + ++  lll+ +s+ ++ f+t+t sns+e++++++++ +ls+l   + ks++++  +va ++ + +++++R+t+++
       EPX74563.1 103 SLVIDFSISRIVPPK---K-KWKCLLLYSISYLACSFQTHTISNSMETVFMFLTIMFLSKLAVSSVKSRKSYLLSVAASISTTIGLFTRITFLA 192
                      ************997...3.577899999***************************************************************** PP

  Glyco_transf_22 186 lwlplvlflllrlvkkrsktf..lfliialvllvlllvlvlviliDslfYgkfvftplnflkyNvlsnlsslyGvhPwyfYllqnlpnilgvll 277
                      +++++++++ +r  k++++++  +f +i+l++ + +l++ l++  D+ fYgkf++t ln++ yN   ++ +l+G h+   ++++n p+++g+ll
       EPX74563.1 193 FVFVPYIYYGFRWLKNNRQNMllIFSHIFLMFCSCVLISSLCLYEDYKFYGKFTVTLLNNISYNSRFENLALHGIHSKTQHFFVNVPLLCGPLL 286
                      ********98888888888777866666666666666688****************************************************** PP

  Glyco_transf_22 278 lavllgllvllsrkvsrlllllltilltLlvysllpHKElRFllpvlPlillsaavlltrlsresakvskklsllvllllfnvvlalllglvhq 371
                      + + l+ ++ +          ++ ++ +++v+s++pH+E RFllp ++l +++aa  +++             ll l++++++v+++++g++hq
       EPX74563.1 287 PTFSLWNIRNA---------QAWFWIFPVAVLSIFPHQEARFLLPAISLYVVFAARYIRSR-----------FLLLLFIIYSIVMSVFYGIMHQ 360
                      **********3.........479999*****************************555544...........699******************* PP

  Glyco_transf_22 372 agvillv.evmseleetkrknrk.ekketssvyvlkecyrtPsssy 415
                      +gv++ v e  s l+++   n++ ++  ++++y  + +y++P++++
       EPX74563.1 361 NGVVPSVvELGSILRDNGLLNQTsNNYYPATIY-YWRTYTAPTWML 405
                      *******76667777776666551445678999.999*******97 PP

>> PMT_2  Dolichyl-phosphate-mannose-protein mannosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3  14.4    0.0023        20      28     156 ..      95     228 ..      87     236 .. 0.54
   2 ?   11.4   9.5   3.1e-05      0.28      30     154 ..     226     352 ..     219     356 .. 0.76

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0023
       PMT_2  28 salagvltilllyllarrlfgkraallaalllavvplfvalsa...lftpdaplvllwalalylllraleknklkyw..llagvlfGlgflsKytaall 121
                 +   ++l +l++ + + r++ ++      ll+++++l     +    + +++++++l++++l  l+    k + +y+  ++a ++ ++g++++ t + +
  EPX74563.1  95 ARFTMFLWSLVIDFSISRIVPPKKKWKCLLLYSISYLACSFQThtiSNSMETVFMFLTIMFLSKLAVSSVKSRKSYLlsVAASISTTIGLFTRITFLAF 193
                 444445555555555555555555555556666666555544432356667777777777666554444455547776667778899*******99888 PP

       PMT_2 122 liaallyllisarrilke...kkpylalllalllfspv 156
                 ++    y+++   r+lk+   +++++ + ++l+ +s v
  EPX74563.1 194 VFV--PYIYYG-FRWLKNnrqNMLLIFSHIFLMFCSCV 228
                 872..244444.33444422122222333333333333 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 3.1e-05
       PMT_2  30 lagvltilllyllarrlfgkraallaalllavvplfvalsa...lftpdaplvllwalalylllraleknklkywllagvlfGlgflsKytaallliaa 125
                  ++++++l+ly   + + + ++ ll  + ++  + ++al     + ++  + v+l++  l+ ++ ++  +++++w+++ ++++l+++ + +a +ll+a+
  EPX74563.1 226 SCVLISSLCLYEDYKFYGKFTVTLLNNISYNSRFENLALHGihsKTQHFFVNVPLLCGPLLPTFSLWNIRNAQAWFWIFPVAVLSIFPHQEARFLLPAI 324
                 566777777777777766677777777777774444443333344444555678888888999999999999*************************** PP

       PMT_2 126 llyllisarrilkekkpylalllalllfs 154
                  ly+++   r ++++ ++l  +++ +++s
  EPX74563.1 325 SLYVVFA-ARYIRSRFLLLLFIIYSIVMS 352
                 *******.9******99998888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (515 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       974  (0.0543254); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.30s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 3712.63
//
Query:       EPX74564.1  [L=682]
Description: calcineurin responsive transcription factor Prz1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.2e-13   49.4  18.1    3.8e-06   27.0   1.4    3.7  3  zf-C2H2        Zinc finger, C2H2 type
    1.5e-09   37.8  15.7       0.01   16.6   0.9    3.8  3  zf-C2H2_4      C2H2-type zinc finger
    2.2e-08   34.2  17.9    2.6e-06   27.6   0.7    4.1  4  zf-H2C2_2      Zinc-finger double domain
    1.1e-06   28.4  10.0      0.053   13.5   0.2    3.5  3  zf-C2H2_6      C2H2-type zinc finger
    0.00031   21.0   8.8        2.2    8.8   0.3    3.6  3  zf-met         Zinc-finger of C2H2 type
     0.0011   19.2   5.8        2.5    8.5   0.3    3.8  3  zf-C2H2_jaz    Zinc-finger double-stranded RNA-binding
  ------ inclusion threshold ------
       0.42   11.3   1.5        1.8    9.2   0.2    2.3  2  FOXP-CC        FOXP coiled-coil domain
       0.74    9.8   6.1          1    9.4   2.0    2.3  2  Zn_Tnp_IS1595  Transposase zinc-ribbon domain
       0.95    9.8   6.3         10    6.5   0.3    3.1  3  zf-C2H2_2      C2H2 type zinc-finger (2 copies)
        1.1    9.5   4.4        1.8    8.9   2.6    2.1  2  C1_4           TFIIH C1-like domain
        1.2    8.8   3.2         13    5.5   0.3    3.0  3  zf_UBZ         Ubiquitin-Binding Zinc Finger
        1.5    9.0   5.6        1.2    9.3   1.8    2.5  2  Zn-ribbon_8    Zinc ribbon domain
        5.6    7.2   9.0          2    8.7   2.5    2.7  2  zf-AN1         AN1-like Zinc finger
        9.6    6.1   8.1         43    4.0   0.8    3.3  3  zf-C2H2_11     zinc-finger C2H2-type


Domain annotation for each model (and alignments):
>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.0   1.4     3e-09   3.8e-06       1      23 []     568     592 ..     568     592 .. 0.97
   2 !   19.6   2.3   6.9e-07   0.00089       1      23 []     598     620 ..     598     620 .. 0.97
   3 !   12.3   0.7   0.00014      0.18       3      21 ..     628     646 ..     626     647 .. 0.95

  Alignments for each domain:
  == domain 1  score: 27.0 bits;  conditional E-value: 3e-09
                 EEET..TTTEEESSHHHHHHHHHCC CS
     zf-C2H2   1 ykCp..dCgksFkrksnLkrHirtH 23 
                 ++C+   Cgk+F+r +nLk+H++tH
  EPX74564.1 568 FVCSfpNCGKRFTRAYNLKSHMNTH 592
                 899999******************9 PP

  == domain 2  score: 19.6 bits;  conditional E-value: 6.9e-07
                 EEETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                 ++C++CgksF r+++ +rH + H
  EPX74564.1 598 FQCSICGKSFARQHDKRRHEQLH 620
                 89*****************9998 PP

  == domain 3  score: 12.3 bits;  conditional E-value: 0.00014
                 ETTTTEEESSHHHHHHHHH CS
     zf-C2H2   3 CpdCgksFkrksnLkrHir 21 
                 Cp C+++F r + L+rH++
  EPX74564.1 628 CPTCHQRFARMDALNRHYK 646
                 *****************97 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.9     8e-06      0.01       1      23 [.     568     592 ..     568     593 .. 0.95
   2 !   16.6   2.0   8.1e-06      0.01       1      23 [.     598     620 ..     598     621 .. 0.94
   3 !   12.8   0.4   0.00014      0.17       1      22 [.     626     647 ..     626     648 .. 0.92

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 8e-06
   zf-C2H2_4   1 fkCpi..CgksFsskkaLlrHlkth 23 
                 f C++  Cgk+F++ ++L++H++th
  EPX74564.1 568 FVCSFpnCGKRFTRAYNLKSHMNTH 592
                 7899999*****************9 PP

  == domain 2  score: 16.6 bits;  conditional E-value: 8.1e-06
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlkth 23 
                 f+C+iCgksF ++++ +rH + h
  EPX74564.1 598 FQCSICGKSFARQHDKRRHEQLH 620
                 89*************9***9998 PP

  == domain 3  score: 12.8 bits;  conditional E-value: 0.00014
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlkt 22 
                 f Cp C+++F + +aL+rH k+
  EPX74564.1 626 FGCPTCHQRFARMDALNRHYKS 647
                 56*****************986 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   1.4      0.12   1.5e+02      11      26 .]     564     581 ..     558     581 .. 0.83
   2 !   27.6   0.7   2.1e-09   2.6e-06       1      25 [.     584     608 ..     584     609 .. 0.96
   3 !   12.0   1.4   0.00017      0.22       3      25 ..     614     636 ..     613     637 .. 0.95
   4 ?   -0.0   0.0       1.1   1.4e+03       1      13 [.     640     652 ..     640     653 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.12
   zf-H2C2_2  11 gekpyeCp..lCdkaFkt 26 
                 +e+ + C+   C+k+F++
  EPX74564.1 564 SESNFVCSfpNCGKRFTR 581
                 57789999889*****85 PP

  == domain 2  score: 27.6 bits;  conditional E-value: 2.1e-09
   zf-H2C2_2   1 nLrrHirkHtgekpyeCplCdkaFk 25 
                 nL+ H+ +Ht+ +p++C+ C+k+F+
  EPX74564.1 584 NLKSHMNTHTNYRPFQCSICGKSFA 608
                 89**********************8 PP

  == domain 3  score: 12.0 bits;  conditional E-value: 0.00017
   zf-H2C2_2   3 rrHirkHtgekpyeCplCdkaFk 25 
                 rrH   H g k + Cp C+ +F+
  EPX74564.1 614 RRHEQLHSGIKAFGCPTCHQRFA 636
                 7*********************7 PP

  == domain 4  score: -0.0 bits;  conditional E-value: 1.1
   zf-H2C2_2   1 nLrrHirkHtgek 13 
                 +L+rH ++  g+k
  EPX74564.1 640 ALNRHYKSEIGQK 652
                 79***99887775 PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   0.5     0.001       1.3       7      24 ..     575     592 ..     568     593 .. 0.94
   2 !   10.6   0.4   0.00034      0.43       2      14 ..     598     610 ..     598     612 .. 0.89
   3 !   13.5   0.2   4.1e-05     0.053       1      22 [.     625     646 ..     625     647 .. 0.90

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.001
   zf-C2H2_6   7 CsksFpslqaLggHkksH 24 
                 C+k+F   ++L  H+ +H
  EPX74564.1 575 CGKRFTRAYNLKSHMNTH 592
                 ***************999 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00034
   zf-C2H2_6   2 heCsvCsksFpsl 14 
                 + Cs+C+ksF  +
  EPX74564.1 598 FQCSICGKSFARQ 610
                 89********875 PP

  == domain 3  score: 13.5 bits;  conditional E-value: 4.1e-05
   zf-C2H2_6   1 vheCsvCsksFpslqaLggHkk 22 
                 ++ C++C+ +F   +aL+ H k
  EPX74564.1 625 AFGCPTCHQRFARMDALNRHYK 646
                 589***************9966 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.5    0.0037       4.7       6      23 ..     575     592 ..     575     594 .. 0.92
   2 !    8.8   0.3    0.0017       2.2       1      21 [.     598     618 ..     598     618 .. 0.90
   3 !    8.2   0.1    0.0026       3.3       3      22 ..     628     647 ..     626     648 .. 0.95

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0037
      zf-met   6 CnvtfnsesqlksHlqGK 23 
                 C ++f+   +lksH++ +
  EPX74564.1 575 CGKRFTRAYNLKSHMNTH 592
                 99*************966 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.0017
      zf-met   1 fyCelCnvtfnsesqlksHlq 21 
                 f+C++C ++f  + + + H q
  EPX74564.1 598 FQCSICGKSFARQHDKRRHEQ 618
                 89*********9999988876 PP

  == domain 3  score: 8.2 bits;  conditional E-value: 0.0026
      zf-met   3 CelCnvtfnsesqlksHlqG 22 
                 C+ C+ +f    +l+ H+++
  EPX74564.1 628 CPTCHQRFARMDALNRHYKS 647
                 ******************98 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.1    0.0069       8.8       7      24 ..     575     592 ..     573     592 .. 0.93
   2 !    8.5   0.3     0.002       2.5       2      21 ..     598     617 ..     597     618 .. 0.91
   3 ?    4.7   0.1     0.029        38       4      23 ..     628     647 ..     626     649 .. 0.95

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0069
                  TTBBBSSHHHHHCCTTSH CS
  zf-C2H2_jaz   7 CdKyFksenaldnHlkSK 24 
                  C K F  +++l+ H++++
   EPX74564.1 575 CGKRFTRAYNLKSHMNTH 592
                  ****************96 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.002
                  CBBTTTTBBBSSHHHHHCCT CS
  zf-C2H2_jaz   2 fYCvlCdKyFksenaldnHl 21 
                  f C +C K F  +++ + H+
   EPX74564.1 598 FQCSICGKSFARQHDKRRHE 617
                  66*****************8 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.029
                  BTTTTBBBSSHHHHHCCTTS CS
  zf-C2H2_jaz   4 CvlCdKyFksenaldnHlkS 23 
                  C++C   F  + al  H+kS
   EPX74564.1 628 CPTCHQRFARMDALNRHYKS 647
                  9******************9 PP

>> FOXP-CC  FOXP coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.2    0.0014       1.8       6      29 ..     569     592 ..     566     608 .. 0.89
   2 ?    0.1   0.1         1   1.3e+03      10      29 ..     629     648 ..     627     657 .. 0.90

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.0014
     FOXP-CC   6 vCkWPgCekvledveeflkhlnse 29 
                 vC  P+C k ++ + ++ +h+n++
  EPX74564.1 569 VCSFPNCGKRFTRAYNLKSHMNTH 592
                 8********************986 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 1
     FOXP-CC  10 PgCekvledveeflkhlnse 29 
                 P C++ +  ++++ +h +se
  EPX74564.1 629 PTCHQRFARMDALNRHYKSE 648
                 99**************9987 PP

>> Zn_Tnp_IS1595  Transposase zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   2.0   0.00081         1      19      45 ..     568     605 ..     563     606 .. 0.91
   2 ?    1.9   0.1      0.17   2.2e+02      19      27 ..     626     634 ..     620     646 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00081
  Zn_Tnp_IS1595  19 fvC..PhCgsr..kayrikt.......rglfqCkeCrk 45 
                    fvC  P+Cg+r  +ay +k+        + fqC+ C+k
     EPX74564.1 568 FVCsfPNCGKRftRAYNLKShmnthtnYRPFQCSICGK 605
                    777669******************************98 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.17
  Zn_Tnp_IS1595  19 fvCPhCgsr 27 
                    f CP C+ r
     EPX74564.1 626 FGCPTCHQR 634
                    67*****76 PP

>> zf-C2H2_2  C2H2 type zinc-finger (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.1      0.03        39      45      73 ..     562     592 ..     521     599 .. 0.72
   2 ?    0.0   0.8      0.83   1.1e+03      51      69 ..     598     616 ..     591     621 .. 0.80
   3 ?    6.5   0.3    0.0082        10      43      73 ..     619     648 ..     613     655 .. 0.83

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.03
   zf-C2H2_2  45 ekieekleCly..CekefkslealreHmkkk 73 
                  k e+++ C +  C+k+f+   +l++Hm+++
  EPX74564.1 562 TKSESNFVCSFpnCGKRFTRAYNLKSHMNTH 592
                 4555667786444***************875 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.83
   zf-C2H2_2  51 leClyCekefkslealreH 69 
                 ++C +C+k+f  +++ r H
  EPX74564.1 598 FQCSICGKSFARQHDKRRH 616
                 7999999999888877777 PP

  == domain 3  score: 6.5 bits;  conditional E-value: 0.0082
   zf-C2H2_2  43 lrekieekleClyCekefkslealreHmkkk 73 
                 l++ i+  + C +C+++f  ++al+ H k++
  EPX74564.1 619 LHSGIKA-FGCPTCHQRFARMDALNRHYKSE 648
                 5555666.99*****************8875 PP

>> C1_4  TFIIH C1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   1.4    0.0028       3.5       5      50 ..     575     622 ..     570     630 .. 0.74
   2 ?    8.9   2.6    0.0014       1.8       1      35 [.     599     635 ..     599     639 .. 0.87

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0028
        C1_4   5 Cqkkfpklakkkkdee..ltssryrCekCkndFCiDCDvFiHesLHnC 50 
                 C k+f+++ + k++ +  +    ++C  C + F    D   He+LH+ 
  EPX74564.1 575 CGKRFTRAYNLKSHMNthTNYRPFQCSICGKSFARQHDKRRHEQLHSG 622
                 8888888776555433225556699*********************74 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0014
        C1_4   1 eCygCqkkfpklakkkkdeelts..sryrCekCkndF 35 
                 +C  C k+f+++++k  +e+l s    + C++C++ F
  EPX74564.1 599 QCSICGKSFARQHDKRRHEQLHSgiKAFGCPTCHQRF 635
                 5999***********999996663378********99 PP

>> zf_UBZ  Ubiquitin-Binding Zinc Finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.91   1.2e+03       6      20 ..     573     588 ..     566     589 .. 0.69
   2 ?    5.5   0.3      0.01        13       3      20 ..     598     616 ..     596     617 .. 0.81
   3 ?    2.1   0.1      0.11   1.4e+02       3      13 ..     626     636 ..     624     644 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.91
      zf_UBZ   6 erCgkeipes.elqEH 20 
                 + Cgk++  +  l +H
  EPX74564.1 573 PNCGKRFTRAyNLKSH 588
                 58***99877777776 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.01
      zf_UBZ   3 ylCerCgkeipes.elqEH 20 
                 ++C+ Cgk++    ++  H
  EPX74564.1 598 FQCSICGKSFARQhDKRRH 616
                 89*******9877676666 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.11
      zf_UBZ   3 ylCerCgkeip 13 
                 + C+ C++++ 
  EPX74564.1 626 FGCPTCHQRFA 636
                 56******986 PP

>> Zn-ribbon_8  Zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   1.3      0.12   1.5e+02      10      38 ..     574     609 ..     567     610 .. 0.51
   2 ?    9.3   1.8   0.00096       1.2       6      39 ..     598     638 ..     594     638 .. 0.73

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.12
  Zn-ribbon_8  10 eCghefe.......vlqsisdaplta.CPeCgsevrr 38 
                  +Cg++f+       ++   + +  +  C  Cg+   r
   EPX74564.1 574 NCGKRFTraynlksHMN-THTNYRPFqCSICGKSFAR 609
                  47777776665432222.1222244447777765555 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00096
  Zn-ribbon_8   6 YrCeeCghefevlqsisdap......lta.CPeCgsevrrv 39 
                  ++C  Cg+ f + +   + +      +   CP+C+++  r+
   EPX74564.1 598 FQCSICGKSFARQHDKRRHEqlhsgiKAFgCPTCHQRFARM 638
                  78*********5554443333566657778*****998885 PP

>> zf-AN1  AN1-like Zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   2.5    0.0015         2       1      28 [.     570     612 ..     570     621 .. 0.76
   2 ?    0.9   0.9      0.42   5.3e+02      13      23 ..     625     635 ..     617     635 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0015
      zf-AN1   1 CsfksCkkkd...............flpfkCryCgkvFClkHr 28 
                 Csf++C+k+                + pf+C+ Cgk+F  +H 
  EPX74564.1 570 CSFPNCGKRFtraynlkshmnthtnYRPFQCSICGKSFARQHD 612
                 8888888887777777777777666678**********99993 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.42
      zf-AN1  13 pfkCryCgkvF 23 
                 +f C++C+++F
  EPX74564.1 625 AFGCPTCHQRF 635
                 489******98 PP

>> zf-C2H2_11  zinc-finger C2H2-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.1      0.11   1.4e+02       9      24 ..     574     589 ..     571     591 .. 0.94
   2 ?    4.0   0.8     0.033        43       5      23 ..     598     616 ..     596     619 .. 0.87
   3 ?    2.2   0.2      0.12   1.5e+02       7      23 ..     628     644 ..     624     646 .. 0.89

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.11
  zf-C2H2_11   9 eCGlcftSqlsLsRHl 24 
                  CG  ft +  L+ H+
  EPX74564.1 574 NCGKRFTRAYNLKSHM 589
                 5**************9 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.033
  zf-C2H2_11   5 cqCleCGlcftSqlsLsRH 23 
                 +qC  CG  f+ q   +RH
  EPX74564.1 598 FQCSICGKSFARQHDKRRH 616
                 6**********99888888 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.12
  zf-C2H2_11   7 CleCGlcftSqlsLsRH 23 
                 C  C   f+   +L+RH
  EPX74564.1 628 CPTCHQRFARMDALNRH 644
                 999************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (682 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       450  (0.025099); expected 358.6 (0.02)
Passed bias filter:                      315  (0.0175693); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.59u 0.22s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 4922.66
//
Query:       EPX74565.1  [L=361]
Description: carbohydrate kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.5e-12   45.6   0.0    1.2e-11   44.5   0.0    1.4  1  PfkB      pfkB family carbohydrate kinase


Domain annotation for each model (and alignments):
>> PfkB  pfkB family carbohydrate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.5   0.0   6.7e-16   1.2e-11     175     294 ..     174     315 ..     159     322 .. 0.85

  Alignments for each domain:
  == domain 1  score: 44.5 bits;  conditional E-value: 6.7e-16
                 HHHHHHHCTESEEEEEHHHHHHHHTSCT.HSHHHHHHHHHHHHH.....TTSSEEEEEEGGGEEEEEE..............TTEEEEEEE...SSSS- CS
        PfkB 175 eallellaladllkpneeElealtgekl.edieealaalhklka.....kgaktvvvtlGkeGalvve..............kdgelkvpav..pkvkv 251
                 +++++++ ++d++ pne +++ l+g +  ++ e+a++++ ++++      g+ +vv  +G+ G++++               + + +++p v   +  v
  EPX74565.1 174 PVCQKAMKYCDIFSPNEVDAANLLGIDVkVAKEKAIECVYAFQEmeigrNGQGWVVLRCGSAGCFIAPstsqtsqeqdgvvaQREAVHIPCVpmAPGSV 272
                 589999*********************99666666665544443111115669*************99999**********9777888888755689** PP

                 SBGTTHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHTSSS CS
        PfkB 252 vDttGAGDsfvggflaallegksleealrfanavAalvvqkkg 294
                 +DttGAG +f+g+++  + + +++  +   a+ +A++++q++g
  EPX74565.1 273 IDTTGAGNTFCGALILEYYRTQNIVLSSVKATVAASFTIQQHG 315
                 ******************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (361 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       390  (0.0217525); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2617.68
//
Query:       EPX74566.1  [L=303]
Description: S-methyl-5-thioadenosine phosphorylase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.4e-33  116.1   0.0    1.6e-33  116.0   0.0    1.1  1  PNP_UDP_1  Phosphorylase superfamily


Domain annotation for each model (and alignments):
>> PNP_UDP_1  Phosphorylase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.0   0.0   8.7e-38   1.6e-33      44     233 ..      51     253 ..       6     254 .. 0.84

  Alignments for each domain:
  == domain 1  score: 116.0 bits;  conditional E-value: 8.7e-38
                 EEEEE--SSHHHH...H.HHHHHHHHHHC--SEEEEEEEEEESSTTT-TT-EEEEEEEEESSSCCG.CCTHHCCTCCCCTTSSEE--HHHHHHHHH..C CS
   PNP_UDP_1  44 vvivstGiGkpna...a.vvaeirllkefgvkaiiriGtaGglnpdlkvGDvvipddainfdgrsp.lygpkeegqyfpdsydapadpelrallke..a 135
                  +++++G+G++ +      +a+i++lk++gv aii+++++G+l++++++ D+v+p+++i+ ++ ++  ++++++++ ++ + d+ +d++l+++l +  +
  EPX74566.1  51 AFLARHGVGHTYTptdVpARANIAALKSLGVHAIISFSAVGSLREEIPPEDFVLPSQIIDRTLCARpNTFFESGCVAHVSFGDP-FDQDLYEVLSQcgS 148
                 57899996654321112379****************************************666555256666668*********.***********998 PP

                 HHTTTTTEEE......EEEEEESESS-CHHHHHHHHHHTC-CEEESSHHHHHHHHHHTT--EEEEEEEEETTTBETTCTCH...HCCCHHHHHHHHHHH CS
   PNP_UDP_1 136 aealgikvhr......GvvatadgfyaeteaelrllrrlgadaveMEtaavaqlArelgipfaairvvsdlaaggadaeath..eeveefaqeaaknaa 226
                   ++g+k+h        +v++++g+ ++t+ae++l+r++g ++++M+  ++a lAre++i +  +++ +d ++ +  +e+ +  e+v++ ++++++na+
  EPX74566.1 149 SLQNGAKLHHktgaddLTVVCMEGPAFSTRAESNLYRSWGGSVINMSVIPEAKLAREAEISYQMVCMATD-YDCWRVNEEPVnvETVMKHLANNRNNAK 246
                 88889888888888999*****************************************************.7776655554455*************** PP

                 HHHHHHH CS
   PNP_UDP_1 227 alllall 233
                  lll+++
  EPX74566.1 247 LLLLEAI 253
                 9999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (303 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       367  (0.0204696); expected 358.6 (0.02)
Passed bias filter:                      349  (0.0194657); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.30s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 2086.46
//
Query:       EPX74567.1  [L=496]
Description: export adaptor Nmd3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.2e-80  267.6   6.3    1.3e-79  267.1   6.3    1.2  1  NMD3      NMD3 family


Domain annotation for each model (and alignments):
>> NMD3  NMD3 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  267.1   6.3   7.4e-84   1.3e-79       1     243 []      24     252 ..      24     252 .. 0.98

  Alignments for each domain:
  == domain 1  score: 267.1 bits;  conditional E-value: 7.4e-84
        NMD3   1 CcrCGkeieelinglCedCllkevditegiek.ievevCkeCgryl.pkgkWvkaeleseellaeclkklvekgLkvseeveevkvelvdaefiwteph 97 
                 Cc+CG+++++   ++C dC++ +vdit+gi++  ++++C+eC+ry+ p ++W+ a  es+el+a+clkkl  +gL+        +v+l+da+fiwteph
  EPX74567.1  24 CCECGVPTQPNAAAMCMDCIKLQVDITTGITReGTINHCRECERYMqPPNHWILAPNESRELMAICLKKL--RGLN--------QVRLIDANFIWTEPH 112
                 ********977777********************************9777********************..****........*************** PP

        NMD3  98 skrikvkvtvqgevrgenetilqqevevevkvkrqqCprCsriagg.yyeaivQvRqkrelteeehkrtfelleqlilkhdahafiskikevkeGlDfy 195
                 s+rik+k+tvq+e+  +++tilqq ++ve++v+++qCp+C+r ++   ++a+vQ Rqk     + hkrtf++leq+ilkh+ah  +++ike+k+G+Dfy
  EPX74567.1 113 SRRIKLKLTVQKEA--FTNTILQQAFQVEFVVNNTQCPDCARTYTPhIWKAVVQCRQK-----VLHKRTFLYLEQVILKHRAHLVTVNIKETKDGIDFY 204
                 **************..8899**************************************.....************************************ PP

        NMD3 196 fgsksaArklveflksevggkvkeseklvsedkksgkevyrltysvrl 243
                 f+++ +A k++efl+s+v++++k+se+l+sed ks++++y++tys ++
  EPX74567.1 205 FAQRAHAVKMIEFLSSVVPIRFKTSEELISEDFKSNTANYKFTYSTEI 252
                 *********************************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (496 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       861  (0.0480228); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.28s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 3572.41
//
Query:       EPX74568.1  [L=470]
Description: CCR4-Not complex subunit Mot2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.9e-21   75.6  12.2    1.9e-21   75.6  12.2    1.6  2  zf-RING_4    RING/Ubox like zinc-binding domain
    4.8e-06   26.3   0.0      1e-05   25.2   0.0    1.7  1  RRM_1        RNA recognition motif. (a.k.a. RRM, RBD, or RNP 
    0.00076   19.6   3.3    0.00076   19.6   3.3    2.2  2  zf-UDP       Zinc-binding RING-finger
     0.0019   17.6   2.5     0.0028   17.1   2.5    1.2  1  Rtf2         Rtf2 RING-finger
      0.002   18.0   8.3       0.34   10.8   9.1    2.5  2  Prok-RING_4  Prokaryotic RING finger family 4
  ------ inclusion threshold ------
      0.033   14.1   3.9      0.081   12.9   3.9    1.6  1  Baculo_IE-1  Baculovirus immediate-early protein (IE-0)
        1.6    9.1  18.9      0.037   14.4  12.1    1.8  2  zf-RING_2    Ring finger domain


Domain annotation for each model (and alignments):
>> zf-RING_4  RING/Ubox like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.6  12.2   7.3e-25   1.9e-21       1      47 [.      18      64 ..      18      65 .. 0.98
   2 ?   -4.2   0.7       6.3   1.6e+04      37      42 ..     211     216 ..     204     219 .. 0.70

  Alignments for each domain:
  == domain 1  score: 75.6 bits;  conditional E-value: 7.3e-25
   zf-RING_4  1 cplCdeeldetdkdlkpCeCgyqiClfCyhrileeeegrCPaCreeY 47
                cplC+ee+d +dk++kpC+Cgy++C+fC+h+i+e+ +grCPaCr+ Y
  EPX74568.1 18 CPLCMEEIDISDKNFKPCQCGYRVCRFCWHHIKEDLNGRCPACRRLY 64
                9********************************************99 PP

  == domain 2  score: -4.2 bits;  conditional E-value: 6.3
   zf-RING_4  37 egrCPa 42 
                 +++CP+
  EPX74568.1 211 NQQCPN 216
                 578986 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.0   4.1e-09     1e-05       2      69 ..     119     195 ..     118     196 .. 0.77

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 4.1e-09
                 EEESE.TTTSSHHHHH.....HHHHTTSCEEEEEEEEE.TTTSEEEE..EEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   2 fVgnL.ppdvteeeLk.....elFskfGpiksiklvrd.etgkskgf..afVeFeskedAekAlealngkklggrel 69 
                 +V++L p+ ++e++++     ++F+++G+i +i + ++ + ++++g+   +++++ kedA++A++a +g   +gr l
  EPX74568.1 119 YVNGLsPKIANEDNIHilkglDYFGQYGKIIKIAINKKaAANSANGHvgVYITYQRKEDAARAIAAIDGSISDGRHL 195
                 56666666666666643333389****************555555552269********************999987 PP

>> zf-UDP  Zinc-binding RING-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   3.3     3e-07   0.00076       7      62 ..      14      66 ..       9      78 .. 0.87
   2 ?   -0.4   0.4      0.49   1.2e+03      40      63 ..     204     224 ..     197     236 .. 0.69

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 3e-07
      zf-UDP  7 ngqiCqiCgddvgltedgelFvacnecafpvcrpcyeyerkdgnqsCPqCktrykr 62
                +  +C +C ++++++++   F  c +c++ vcr c+   + d n  CP C+  y+ 
  EPX74568.1 14 DDMLCPLCMEEIDISDK--NFKPC-QCGYRVCRFCWHHIKEDLNGRCPACRRLYTE 66
                5678********99764..69999.5*************************99876 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.49
      zf-UDP  40 pcyeyerkdgnqsCPqCktrykrl 63 
                  c +y r   nq CP+   +y + 
  EPX74568.1 204 YCTSYLR---NQQCPNPSCMYLHE 224
                 5666665...67899999998764 PP

>> Rtf2  Rtf2 RING-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   2.5   1.1e-06    0.0028     104     199 ..       5     103 ..       2     161 .. 0.73

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 1.1e-06
        Rtf2 104 kdatkdtkeapfiCpltglemngktkfvalrkCGcVfsekalkevksev...ClvCgkeykeedviplnptkeelellkarleeekakkkkkkkakkkk 199
                 +d+++ ++e   +Cpl   e++   k +   +CG  +      ++k++    C+ C   y+ee+v     t ee ++  +r +e+k+++k++k+ ++++
  EPX74568.1   5 QDSYSSEEEDDMLCPLCMEEIDISDKNFKPCQCGYRVCRFCWHHIKEDLngrCPACRRLYTEENVQWRPVTAEEWKMDLHRKNERKKREKERKEVEASN 103
                 467888999999**********************988888888888544445**********9974333333333333333333333333333322222 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.5   0.1     0.006        15      29      43 ..      14      28 ..       6      32 .. 0.74
   2 !   10.8   9.1   0.00013      0.34       1      39 [.      18      63 ..      18      69 .. 0.69

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.006
  Prok-RING_4 29 dlssCPlCqrrisks 43
                 d   CPlC ++i+ s
   EPX74568.1 14 DDMLCPLCMEEIDIS 28
                 4447******99865 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00013
  Prok-RING_4  1 CvlCgeq..ekkailep..CgHlvCkeCfdskdls...sCPlCqrr 39
                 C lC e+   ++  ++p  Cg  vC+ C+ + +     +CP C+r 
   EPX74568.1 18 CPLCMEEidISDKNFKPcqCGYRVCRFCWHHIKEDlngRCPACRRL 63
                 66777766634444555116888*******99554459******85 PP

>> Baculo_IE-1  Baculovirus immediate-early protein (IE-0)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   3.9   3.2e-05     0.081      83     136 ..      18      69 ..      11      73 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 3.2e-05
  Baculo_IE-1  83 cnicedt.saeerflkPneccGykicnlcyanlwkfstvyPvcPvcktsfksssk 136
                  c +c +     ++ +kP + cGy++c  c+ ++ +  ++   cP c+  + ++++
   EPX74568.1  18 CPLCMEEiDISDKNFKPCQ-CGYRVCRFCWHHIKE--DLNGRCPACRRLYTEENV 69 
                  8888654156788899976.7********887765..5889*****999887765 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4  12.1   1.5e-05     0.037       3      44 .]      18      61 ..      16      61 .. 0.77
   2 ?   -2.6   0.5       2.9   7.5e+03      36      42 ..     210     216 ..     203     222 .. 0.55

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 1.5e-05
   zf-RING_2  3 CpICleelssadsvl.llpCgHvfhreClerwlrssst..CPlCr 44
                Cp+C+ee++ +d+    ++Cg+  +r C  + +++  +  CP+Cr
  EPX74568.1 18 CPLCMEEIDISDKNFkPCQCGYRVCRFCWHH-IKEDLNgrCPACR 61
                ********88888552558***9*****777.55544467****9 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 2.9
   zf-RING_2  36 ssstCPl 42 
                 ++++CP+
  EPX74568.1 210 RNQQCPN 216
                 3345664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (470 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1127  (0.0628591); expected 358.6 (0.02)
Passed bias filter:                      567  (0.0316247); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.61u 0.29s 00:00:00.89 Elapsed: 00:00:00.47
# Mc/sec: 2988.83
//
Query:       EPX74569.1  [L=366]
Description: Clr6 histone deacetylase associated PHD protein- 1 Cph1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.2e-11   44.3  24.3    1.3e-11   44.2   6.7    2.4  2  PHD          PHD-finger
     0.0039   17.0  24.1      0.081   12.8   9.9    3.4  3  C1_1         Phorbol esters/diacylglycerol binding domain (C1
  ------ inclusion threshold ------
      0.019   15.1   3.1      0.019   15.1   3.1    2.8  3  Zf_RING      KIAA1045 RING finger
      0.064   13.0   0.0       0.18   11.6   0.0    1.7  1  Rep_fac-A_C  Replication factor-A C terminal domain


Domain annotation for each model (and alignments):
>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.2   6.7   2.9e-15   1.3e-11       1      50 [.      86     131 ..      86     133 .. 0.97
   2 !    5.8   9.6    0.0028        13       1      33 [.     206     238 ..     206     247 .. 0.88

  Alignments for each domain:
  == domain 1  score: 44.2 bits;  conditional E-value: 2.9e-15
                 SBTTTTSTTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSSTBSSTTTH CS
         PHD   1 rCavCkkksdeeeelvqCdgCkrwfHqkClkppleseekpegewlCekCk 50 
                 +C++C++     + +++C++C r+fH +Cl+pp +++e+p+g+w+C++C+
  EPX74569.1  86 YCSACGG----RGLFLCCESCPRSFHLSCLDPPITEDEIPDGSWYCTSCS 131
                 7******....9*************************************7 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0028
                 SBTTTTSTTSTTSCEEEETTTSCEEETTTSSST CS
         PHD   1 rCavCkkksdeeeelvqCdgCkrwfHqkClkpp 33 
                 +C  C+k s    ++  C+ C++ +H  C k  
  EPX74569.1 206 YCGHCSKPSLGACKVFGCQVCDTFYHSGCFKHA 238
                 699****777799****************9876 PP

>> C1_1  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   1.8   0.00011      0.51       9      43 ..      82     111 ..      76     117 .. 0.83
   2 ?    1.9   0.2     0.048   2.2e+02      29      40 ..     125     136 ..     122     137 .. 0.88
   3 !   12.8   9.9   1.8e-05     0.081      10      48 ..     203     240 ..     197     244 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00011
                 SS--B-TTT-SB--SSSS-EEEETTT--EE-CCCC CS
        C1_1   9 kqptfCkhCgeflwgkekqglkCswCkllvHkkCh 43 
                 k+  +C+ Cg          l+C+ C +++H +C+
  EPX74569.1  82 KNVDYCSACGGRG-----LFLCCESCPRSFHLSCL 111
                 6778899998766.....689*************7 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.048
                 EEETTT--EE-C CS
        C1_1  29 lkCswCkllvHk 40 
                 + C+ C+++ H 
  EPX74569.1 125 WYCTSCSMTQHV 136
                 89******9995 PP

  == domain 3  score: 12.8 bits;  conditional E-value: 1.8e-05
                 S--B-TTT-SB--SSSS-EEEETTT--EE-CCCCTTS-S CS
        C1_1  10 qptfCkhCgeflwgkekqglkCswCkllvHkkChekvpk 48 
                   ++C hC ++   ++   + C++C   +H  C+++++ 
  EPX74569.1 203 ALAYCGHCSKPS-LGACKVFGCQVCDTFYHSGCFKHAKA 240
                 5689******97.79999*****************9986 PP

>> Zf_RING  KIAA1045 RING finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   1.6     0.012        52       8      35 ..      87     112 ..      80     120 .. 0.72
   2 ?   -3.5   0.5       2.6   1.2e+04      58      64 ..     125     131 ..     121     134 .. 0.80
   3 ?   15.1   3.1   4.3e-06     0.019      16      46 ..     217     247 ..     201     256 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.012
     Zf_RING   8 CeiCevytaeelypCRvCtkvfHegClr 35 
                 C+ C    +   + C  C + fH +Cl 
  EPX74569.1  87 CSACGG--RGLFLCCESCPRSFHLSCLD 112
                 555543..233467899*********96 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 2.6
     Zf_RING  58 WsCaeCd 64 
                 W C++C 
  EPX74569.1 125 WYCTSCS 131
                 9999995 PP

  == domain 3  score: 15.1 bits;  conditional E-value: 4.3e-06
     Zf_RING  16 aeelypCRvCtkvfHegClrklgylqdesal 46 
                 a + + C vC+  +H gC+++ + +++e a+
  EPX74569.1 217 ACKVFGCQVCDTFYHSGCFKHAKACRHEVAS 247
                 567899*****************99987665 PP

>> Rep_fac-A_C  Replication factor-A C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   3.9e-05      0.18      33      98 ..     118     189 ..      96     201 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 3.9e-05
                  E..TTTEEEETTTTEE.ESS--EEEEEEEEEE-SS-EEEEEEEH...HHHHHHHSS-HHHHHHHCCC-HHHH CS
  Rep_fac-A_C  33 e..edgewrCekCdke.veepkyryilsikvsDstgqlwvtlFn...eaaekllglsaeelkklkeedeeef 98 
                  +   dg+w+C  C ++ +  pk+ + l  ++ D+++++ v+ +n    + +++ gls + + k +e+++ ++
   EPX74569.1 118 DeiPDGSWYCTSCSMTqHVPPKQPLGLWSQLFDWVDSANVSQYNlpdAVIHHFHGLSRDSVGKYEEQEDISL 189
                  33468********9861556799999*****************83312334455889999998888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (366 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1311  (0.0731218); expected 358.6 (0.02)
Passed bias filter:                      538  (0.0300073); expected 358.6 (0.02)
Passed Vit filter:                        67  (0.00373696); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 2560.63
//
Query:       EPX74570.1  [L=930]
Description: hypothetical protein SOCG_02053 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.5e-69  232.1   5.3    2.5e-69  232.1   5.3    1.8  2  UPF1_Zn_bind     RNA helicase (UPF2 interacting domain)
    1.6e-58  197.6   0.0    3.6e-58  196.5   0.0    1.6  1  AAA_12           AAA domain
    4.4e-52  177.5   3.2    3.5e-27   95.8   0.3    2.3  2  AAA_11           AAA domain
    5.9e-31  106.6   0.0    1.2e-30  105.5   0.0    1.6  1  DUF5599          Domain of unknown function (DUF5599)
    2.5e-15   56.7   0.0    9.8e-15   54.8   0.0    1.9  1  AAA_30           AAA domain
      7e-12   45.9   0.0    2.2e-11   44.3   0.0    1.9  2  AAA_19           AAA domain
    1.1e-05   25.2   0.0     0.0031   17.1   0.0    2.5  2  UvrD-helicase    UvrD/REP helicase N-terminal domain
    2.3e-05   24.5   0.0    4.7e-05   23.5   0.0    1.5  1  ResIII           Type III restriction enzyme, res subunit
     0.0003   20.6   0.0       0.16   11.7   0.0    2.8  3  Viral_helicase1  Viral (Superfamily 1) RNA helicase
      0.001   18.4   4.3     0.0034   16.7   0.1    3.4  3  DUF2075          Uncharacterized conserved protein (DUF2075)
     0.0013   18.5   0.0     0.0024   17.7   0.0    1.5  1  DEAD             DEAD/DEAH box helicase
  ------ inclusion threshold ------
      0.021   14.3   0.1       0.12   11.9   0.0    2.1  2  PhoH             PhoH-like protein
      0.027   14.5   0.0        7.1    6.6   0.0    2.6  2  AAA_5            AAA domain (dynein-related subfamily)
      0.028   14.0   0.0      0.053   13.1   0.0    1.4  1  AAA_25           AAA domain
      0.038   14.3   0.0       0.13   12.6   0.0    2.0  1  AAA_22           AAA domain
      0.067   12.4   0.0       0.77    8.9   0.0    2.1  2  PIF1             PIF1-like helicase
      0.071   13.0   0.0       0.16   11.8   0.0    1.7  1  Helicase_RecD    Helicase
       0.11   12.9   0.4       0.42   11.0   0.4    1.9  1  AAA_16           AAA ATPase domain
       0.14   12.0   0.0       0.33   10.8   0.0    1.6  1  NACHT            NACHT domain
       0.17   12.3   0.2       0.37   11.2   0.2    1.7  1  AAA              ATPase family associated with various cellul


Domain annotation for each model (and alignments):
>> UPF1_Zn_bind  RNA helicase (UPF2 interacting domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  232.1   5.3   2.8e-72   2.5e-69       2     152 .]      48     198 ..      47     198 .. 0.99
   2 ?   -3.2   0.0       7.9   7.1e+03      29      46 ..     424     442 ..     422     446 .. 0.73

  Alignments for each domain:
  == domain 1  score: 232.1 bits;  conditional E-value: 2.8e-72
  UPF1_Zn_bind   2 aCaYCgisdpesvvkCaackkwFCngkgktsashivthlvrskhkevslhkesplgdtvleCyncgsknvflLgfipaksesvvvllcrepcasaks 98 
                   +CaYC+is+p+s+vkC +c+kwFCn+++k+ ashiv hlvr++hk+vslh+espl+dt+leCyncg++nvflLgfipak+++vvvllcr+pca+++ 
    EPX74570.1  48 CCAYCNISNPNSIVKCLHCNKWFCNTREKSGASHIVIHLVRARHKQVSLHSESPLSDTTLECYNCGTRNVFLLGFIPAKAKTVVVLLCRQPCAKSSL 144
                   8************************************************************************************************ PP

  UPF1_Zn_bind  99 lkdlnwdlsewqpliedrqllswlvkvpseeeqlrarkisakqiekleelwkkn 152
                   +kd+nwdls+wqp+i+drq+l+wl+++pseeeq+ a +i+++qi +leelw+k+
    EPX74570.1 145 AKDMNWDLSQWQPIISDRQFLPWLITPPSEEEQKLASPITSQQIIRLEELWRKD 198
                   ***************************************************985 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 7.9
  UPF1_Zn_bind  29 gkt.sashivthlvrskhk 46 
                   gkt +++ iv+hl + +++
    EPX74570.1 424 GKTvTSASIVYHLATIQNR 442
                   55557889****9987765 PP

>> AAA_12  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  196.5   0.0     4e-61   3.6e-58       1     198 [.     613     809 ..     613     810 .. 0.92

  Alignments for each domain:
  == domain 1  score: 196.5 bits;  conditional E-value: 4e-61
      AAA_12   1 lerSlferllkkekekvvlLdtqYRmhpeIsrfpsklfYkgkLkdaesvkkrele.aqealeepleplvfidvekseeekekkeksyiNeeEaelvvkl 98 
                 l++Slfer++  + +++  L +qYRmhp +s+fps++fY+g+L+++ ++++r  + ++  + +p epl+f++  ++ee + +  +sy N++Ea+++ k+
  EPX74570.1 613 LSQSLFERMIILG-NSPFRLVVQYRMHPCLSEFPSNTFYEGTLQNGVTTSERIARhVDFPWIQPDEPLMFYANFGQEELSASG-TSYLNRTEASTCEKI 709
                 589**********.9********************************88887665488999**********999888888876.*************** PP

      AAA_12  99 vekllkkgseeerkkigvitpYraqvellkkklkekeeekseke..ievntvdgfQGrekdviilslVRsnekkeigflkderrlNValTRAkskliiv 195
                 v+++lk+ +    ++ig+itpY  q +++ + ++++ + +++    +ev++vd+fQGrekd+iils+VRs+e++ igfl+d rrlNValTRAk+ +i++
  EPX74570.1 710 VTRFLKCNVLP--EQIGIITPYDGQRSYIVQYMQNNGSMQKDLYkyVEVASVDAFQGREKDFIILSCVRSSEHQGIGFLNDPRRLNVALTRAKYGVIVL 806
                 *********99..9*******************9876555433255***************************************************** PP

      AAA_12 196 Gnk 198
                 Gn+
  EPX74570.1 807 GNP 809
                 *97 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.3   0.3   2.5e-26   2.3e-23       1     135 [.     397     519 ..     397     529 .. 0.84
   2 !   95.8   0.3   3.9e-30   3.5e-27     177     261 .]     524     606 ..     508     606 .. 0.88

  Alignments for each domain:
  == domain 1  score: 83.3 bits;  conditional E-value: 2.5e-26
      AAA_11   1 klndsqreaiksalseseitliqGPPGtgKTktivellsqllsrrk.seeeksakpriLvCapSNaAvDellerllrglldsegekykpkivRvgnee. 97 
                 kln+sqrea++s+ls++  +liqGPPGtgKT t ++++ +l+   + ++++++ +  +LvCapSN+AvD+l+e++ r         ++++++Rv +++ 
  EPX74570.1 397 KLNASQREAVRSVLSKPL-SLIQGPPGTGKTVTSASIVYHLA---TiQNRKRKSPLPVLVCAPSNVAVDQLAEKINR---------TGLRVIRVAAKSr 482
                 69***************6.************88888888882...235678888999*****************999.........************9 PP

      AAA_11  98 eriseavksvsleekvekrlekeekaqlakeiskelek 135
                 e+i+++v+ +sl e++++ + +  + q   ++++e+++
  EPX74570.1 483 EDIESSVSFLSLHEQIKNYQGNP-ELQRLFKLRAENNE 519
                 99***************999886.44444555555554 PP

  == domain 2  score: 95.8 bits;  conditional E-value: 3.9e-30
      AAA_11 177 lskeleeaeesleeevldeaeivltTlsgagsklleklakkfdvviIDEAaqavEpstliPlrlgakkvvLvGDpkQLpatvisk 261
                  +k+l+   +++e+e+l+ a+++++T++gag k+  k+  +f+ v+IDEA+qa E++++iPl lgak+vvLvGD++QL ++v++k
  EPX74570.1 524 DEKRLRILIAAAERELLRAAHVICCTCVGAGDKRVAKY--RFRSVLIDEATQASEAECMIPLVLGAKQVVLVGDHQQLGPVVMNK 606
                 3567778888899*************************..9*****************************************975 PP

>> DUF5599  Domain of unknown function (DUF5599)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.5   0.0   1.4e-33   1.2e-30       1      93 []     250     341 ..     250     341 .. 0.99

  Alignments for each domain:
  == domain 1  score: 105.5 bits;  conditional E-value: 1.4e-33
     DUF5599   1 qtqddisvrWdvglnkkrlasFvlpkldsgelrlvvGDelrlkykgseaeeWegeghvvkltdssseevtleLrssskkaPtevttgFtvefV 93 
                 qtq+d++vrWd+++n++ +a+F lpkl+sge+rl++GDe++l y+g+ + +W+++g+v+k++++ s+ev+leL++s  ++P+e+ ++F+v++V
  EPX74570.1 250 QTQKDVAVRWDQAINRRYTAWFLLPKLESGEIRLAIGDEMKLTYEGELRPRWSSTGYVIKIPNNVSDEVGLELKRS-DNVPVECLHNFSVDYV 341
                 99************************************************************************99.**************98 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.8   0.0   1.1e-17   9.8e-15       2     132 ..     398     603 ..     397     615 .. 0.85

  Alignments for each domain:
  == domain 1  score: 54.8 bits;  conditional E-value: 1.1e-17
      AAA_30   2 lnaeQaaavealltsgdrvavltGpAGtGKttalkalreaweaag.......grviglAptgkaAkvLaeelgieastiakllkrlk............ 81 
                 lna+Q++av+++l+++  +++++Gp+GtGKt + ++++ ++++ +        +v+++Ap++ a ++Lae+++ ++ ++ ++  + +            
  EPX74570.1 398 LNASQREAVRSVLSKP--LSLIQGPPGTGKTVTSASIVYHLATIQnrkrkspLPVLVCAPSNVAVDQLAEKINRTGLRVIRVAAKSRediessvsflsl 494
                 99**************..9**************99998777766447899999****************988877777777766666777788888889 PP

      AAA_30  82 .............................................................grarlepg.tllivDEagmvdtkq.laallkaaekaga 117
                                                                              +    + + + +++DEa  ++ ++ +  l+  a+    
  EPX74570.1 495 heqiknyqgnpelqrlfklraennelslqdekrlriliaaaerellraahvicctcvgagdK-RVAKYRfRSVLIDEATQASEAEcMIPLVLGAK---- 588
                 9999999****************************************************743.333334699*******9976551445555554.... PP

      AAA_30 118 kvilvGDerQlasVe 132
                 +v+lvGD++Ql++V 
  EPX74570.1 589 QVVLVGDHQQLGPVV 603
                 6************96 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       9.8   8.8e+03     118     145 ..     269     295 ..     235     296 .. 0.69
   2 !   44.3   0.0   2.5e-14   2.2e-11       1     143 [.     402     601 ..     402     604 .. 0.71

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 9.8
      AAA_19 118 qyrLlkallgekkklllvGDpdQliyvf 145
                 ++ Ll +l  +++  l++GD+  l y++
  EPX74570.1 269 AWFLLPKLE-SGEIRLAIGDEMKLTYEG 295
                 555666666.444458999999999887 PP

  == domain 2  score: 44.3 bits;  conditional E-value: 2.5e-14
      AAA_19   1 qreave.alkekvllvtaGpGtGKTrvlkhivallvelg...gvkpeeillvaftgrAakelrerlaalgae.......atTiHrlal........... 77 
                 qreav+  l++++ l+ ++pGtGKT +   iv +l  ++   + +p ++l++a+ + A+++l+e+++  g++                           
  EPX74570.1 402 QREAVRsVLSKPLSLIQGPPGTGKTVTSASIVYHLATIQnrkRKSPLPVLVCAPSNVAVDQLAEKINRTGLRvirvaakS-------Rediessvsfls 493
                 99***989999999************9888888776655000556799******************87777754444440.......245555666666 PP

      AAA_19  78 .......................................ldfddlltealelle...................eaeeekklqeee.llivDEfqdvdel 117
                                                                                             +++  + ++  +++DE+ + +e 
  EPX74570.1 494 lheqiknyqgnpelqrlfklraennelslqdekrlriliA-------------AaerellraahvicctcvgaG--DKRVAKYRFrSVLIDEATQASEA 577
                 7778889999999999999998888877766666666542.............022333334555558887531..33334445579******999865 PP

      AAA_19 118 qyrLlkallgekkklllvGDpdQliy 143
                 +  ++  +lg +k+++lvGD++Ql +
  EPX74570.1 578 EC-MIPLVLG-AKQVVLVGDHQQLGP 601
                 54.5566664.456*********965 PP

>> UvrD-helicase  UvrD/REP helicase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   3.4e-06    0.0031       1     102 [.     398     548 ..     398     559 .. 0.72
   2 ?    5.5   0.0     0.012        11     254     294 ..     560     598 ..     555     599 .. 0.75

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 3.4e-06
                    SSHHHHHHHHS.-SSE.EEEEE-TTSSHHHHHHHHHHHHHHTSSSTGGG...EEEEESSHHHHHHHHHHHHH........................ CS
  UvrD-helicase   1 lnpeqreaias.lggp.ilveAsAGsGKTfvlaerilrlikeeeiepdr...ilvvTFTnkAaeElkeRiee........................ 67 
                    ln++qrea++s l++p  l+   +G+GKT + a+ + +l + ++ + ++   +lv    n A + l e+i++                        
     EPX74570.1 398 LNASQREAVRSvLSKPlSLIQGPPGTGKTVTSASIVYHLATIQNRKRKSplpVLVCAPSNVAVDQLAEKINRtglrvirvaaksrediessvsfls 493
                    6899*******9666625889999*****99887777766555544444777********************999999998888888888887777 PP

                    ....................HHHHCCHHCTT-H.HHHHHHHHCTTSEEEEHHHHHH CS
  UvrD-helicase  68 ....................alkkaeqessdde.rlrlalqnlseanisTlHsfcq 102
                                        + +++e    d e rlr   + +++    + H +c+
     EPX74570.1 494 lheqiknyqgnpelqrlfklRAENNELSLQD-EkRLRILIAAAERELLRAAHVICC 548
                    7777777777777777664333333222222.246766666666666666666665 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.012
                    HHHSSEEEESSGGG-BHHHHHHHHHHHTTTTTEEEEE-GGG CS
  UvrD-helicase 254 rerykeiliDEyQDTnkiQyrilkllasgheelfmvGDpkQ 294
                    + r++ +liDE+ + +++   ++ l+  + +++++vGD  Q
     EPX74570.1 560 KYRFRSVLIDEATQASEAE-CMIPLVLGA-KQVVLVGDHQQ 598
                    5699*******97777654.455555555.47*******99 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.0   5.2e-08   4.7e-05       3     109 ..     397     533 ..     395     593 .. 0.62

  Alignments for each domain:
  == domain 1  score: 23.5 bits;  conditional E-value: 5.2e-08
                 EE-HHHHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S..........-EEEEESSHHHHHHHHHHG...................... CS
      ResIII   3 elreyQeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkee.....kflflvprkslleqtleef...................... 74 
                 +l+  Q ea++++l+      +   li+ + GtGKT+++a+++++l++ ++++      +l+ +p++  ++q+ e++                      
  EPX74570.1 397 KLNASQREAVRSVLS------KPLSLIQGPPGTGKTVTSASIVYHLATIQNRKrksplPVLVCAPSNVAVDQLAEKInrtglrvirvaaksrediessv 489
                 567788888888883......34689********************999888889*******************9996666666555555544444333 PP

                 .........GGGTGG....GEEEESSS-B--.......-SEEEE CS
      ResIII  75 .........kkflseaykeigkkvsgdkkkakekdstnkkilvt 109
                          k+++ ++  +   k++ ++++ + +d++  +il++
  EPX74570.1 490 sflslheqiKNYQGNPELQRLFKLRAENNELSLQDEKRLRILIA 533
                 33333333333333332222222222222224444444444444 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       2.3   2.1e+03       2      13 ..     416     427 ..     415     445 .. 0.79
   2 !   11.7   0.0   0.00018      0.16      56     120 ..     556     619 ..     515     668 .. 0.80
   3 ?    5.7   0.0     0.012        11     166     232 ..     736     805 ..     681     807 .. 0.61

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 2.3
  Viral_helicase1   2 vvhGvpGcGKSt 13 
                      +++G pG GK+ 
       EPX74570.1 416 LIQGPPGTGKTV 427
                      79999*****95 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 0.00018
  Viral_helicase1  56 alvkstkgkililDEylllhaGyill.laalskaklvilfGDplQipfhsrnasfllahlpsslsh 120
                      ++v++ +++ +++DE++++  ++    +    +ak+v+l+GD++Q +    n+++  a+l+ sl +
       EPX74570.1 556 KRVAKYRFRSVLIDEATQASEAE--CmIPLVLGAKQVVLVGDHQQLGPVVMNKKVAQARLSQSLFE 619
                      5566678999********98543..3334468999**********999888887777777666654 PP

  == domain 3  score: 5.7 bits;  conditional E-value: 0.012
  Viral_helicase1 166 vlvyltftqalkealgvr.....evttvhevqGltfdkVtlvllketdlelis..esrenllvAlTRhrkslvi 232
                      +++y +   +    ++ +     ev  v   qG + d  +l + ++++ + i   +++  l vAlTR++ ++++
       EPX74570.1 736 IVQYMQNNGS----MQKDlykyvEVASVDAFQGREKDFIILSCVRSSEHQGIGflNDPRRLNVALTRAKYGVIV 805
                      3333333333....3333444578999******998877765554433332225699***********987765 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.3       1.1   9.7e+02     133     195 ..     186     247 ..     183     264 .. 0.75
   2 !   16.7   0.1   3.8e-06    0.0034       3      56 ..     414     477 ..     412     644 .. 0.60
   3 ?    0.5   0.0      0.32   2.9e+02     345     359 ..     791     805 ..     749     808 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 1.1
     DUF2075 133 gQelntgeigteeelkklakkleveleekvhL.ksqfRvaaseaviewvdalldgkkekakpls 195
                 +Q+++ +e ++++  +  +++l++ +e+  +L ++ +R + + ++ + ++ l+  ++e  k+l+
  EPX74570.1 186 QQIIRLEELWRKD-SHATLEDLDKPIEDD-SLpSVELRYKDAHEYQAILSPLIHAEAEYDKRLK 247
                 7999999999776.566688888888888.6646789999999999888888877766655554 PP

  == domain 2  score: 16.7 bits;  conditional E-value: 3.8e-06
     DUF2075   3 vvlVtGvaGtGKtvvllnllael.....eddeeertavylsvNhplvlvlrealakke.....e 56 
                 + l++G +GtGKtv   ++++ l     ++ ++   + +   ++  v+ l e+++++       
  EPX74570.1 414 LSLIQGPPGTGKTVTSASIVYHLatiqnRKRKSPLPVLVCAPSNVAVDQLAEKINRTGlrvirV 477
                 569********************76533111111122222233333444444444444433331 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.32
     DUF2075 345 ayrVLLtRGrkGlyi 359
                 +++V LtR+ +G+++
  EPX74570.1 791 RLNVALTRAKYGVIV 805
                 79**********998 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   2.7e-06    0.0024       3     105 ..     401     505 ..     399     536 .. 0.67

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 2.7e-06
                 HHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHS....TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHH.. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.. RF
        DEAD   3 iQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyet....kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskld.. 95 
                  Q+ea+  +l++   l++++ G+GKT   +  v+ +++ t    k+k+   +l+ +P+   + q ++++++ +  + +rv    + ++ ++ +s l+  
  EPX74570.1 401 SQREAVRSVLSKPLSLIQGPPGTGKTVTSASIVY-HLA-TiqnrKRKSPLPVLVCAPSNVAVDQLAEKINRTGLRV-IRVA-AKSREDIESSVSFLSlh 495
                 69************************87433333.221.1234599999******************998887742.3333.22334444555554322 PP

                 TTCSEEEEEH CS
                 xxxxxxxxxx RF
        DEAD  96 ngvdivvgtp 105
                 ++++ + g+p
  EPX74570.1 496 EQIKNYQGNP 505
                 4466666666 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00013      0.12       5      40 ..     398     433 ..     394     446 .. 0.83
   2 ?   -0.8   0.0      0.98   8.8e+02     123     161 ..     566     602 ..     564     621 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00013
                 -SHHHHHHHHHHHH-SEEEEE--TTSSTTHHHHHHH CS
        PhoH   5 ktkeQkeylealkkndivfaiGpaGtGKtylavala 40 
                  +++Q+e+++++ ++ +  + Gp GtGKt  + ++ 
  EPX74570.1 398 LNASQREAVRSVLSKPLSLIQGPPGTGKTVTSASIV 433
                 6899*************************9876654 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.98
                 EEE-SGGG--HHHHHHHHTTB-TT-EEEEEE-------- CS
        PhoH 123 vilDEAQnttkeqmkmfltRlGenskvvvtGdvtqidlp 161
                 v++DEA  +++++   +   lG + +vv++Gd +q    
  EPX74570.1 566 VLIDEATQASEAECM-IPLVLGAK-QVVLVGDHQQLGPV 602
                 789999888777654.44447765.79999**9998766 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0     0.027        24      56     100 ..     176     221 ..     167     249 .. 0.84
   2 ?    6.6   0.0     0.008       7.1       3      23 ..     416     436 ..     415     454 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.027
                 .--------G-SEEEEESGGG--.HHHHHHHHHHHHSSEEE..-SS CS
       AAA_5  56 dsplvraaregeilvlDEverae.sevlnsLlslleerrllleegg 100
                 +++l   +++ +i++l+E++r +  ++l+ L +++e++ l+  e++
  EPX74570.1 176 EQKLASPITSQQIIRLEELWRKDsHATLEDLDKPIEDDSLPSVELR 221
                 56677777899************8999**********999866554 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.008
                 EEE--SSSSHHHHHHHGGGGB CS
       AAA_5   3 lLvGppGtgKselaerlaaal 23 
                 l++GppGtgK+  + ++   l
  EPX74570.1 416 LIQGPPGTGKTVTSASIVYHL 436
                 799********9988877666 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   5.9e-05     0.053      22      98 ..     402     484 ..     387     546 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 5.9e-05
      AAA_25  22 rrwlvkgllpagelallaGapgtGKttlaldlalavatGkpwlgpvapeqgkVlyvsaEds.edelrrRlravgeal.........r 98 
                 +r  v+ +l  + l+l+ G+pgtGKt+   ++++++at ++   + +  + +Vl+ +  +   d+l++++ ++g  +         +
  EPX74570.1 402 QREAVRSVL-SKPLSLIQGPPGTGKTVTSASIVYHLATIQN---RKRKSPLPVLVCAPSNVaVDQLAEKINRTGLRVirvaaksreD 484
                 566677776.58899**********************7663...2346899999988766646677777777777666664443331 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   0.00014      0.13       7      62 ..     414     469 ..     409     571 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00014
      AAA_22   7 ilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellr 62 
                 + ++ G++GtGKT++ + +++ l   ++ ++++p  v+v++ps    ++l++++ r
  EPX74570.1 414 LSLIQGPPGTGKTVTSASIVYHLATIQNRKRKSPLPVLVCAPSNVAVDQLAEKINR 469
                 56899*****************9655555556666668888888899999888876 PP

>> PIF1  PIF1-like helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.22     2e+02       2      63 ..     398     460 ..     397     487 .. 0.66
   2 ?    8.9   0.0   0.00086      0.77     136     162 ..     582     608 ..     565     624 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.22
                 --HHHHHHHHHH......HCTS-EEEEESTTSSCHHHHHHHHHHCHC.......TCCCEEEEESSHHHH CS
        PIF1   2 LneeQkkvfdaiieavlnekgklfFvtGsgGtgKtflwkallkklrs.......egkivlavAssGvAa 63 
                 Ln++Q+++++++       +  l  ++G  GtgKt     ++  l +       +   vl+ A s vA 
  EPX74570.1 398 LNASQREAVRSV------LSKPLSLIQGPPGTGKTVTSASIVYHLATiqnrkrkSPLPVLVCAPSNVAV 460
                 778888888877......333445689*******97766665444332111100334577777777765 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00086
                 -SCCCC-EEEEE--TTS-----SSSSS CS
        PIF1 136 dkpFGGktvvlgGDfrQilPviekgsr 162
                     G k+vvl GD +Q+ Pv+ + + 
  EPX74570.1 582 PLVLGAKQVVLVGDHQQLGPVVMNKKV 608
                 55689****************966543 PP

>> Helicase_RecD  Helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00018      0.16       2      63 ..     417     485 ..     416     573 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00018
  Helicase_RecD   2 ltAdRGRGKSaalGlalaaliaegk......snilvtapskenvktlfeflak.glealglkeeekkkk 63 
                    +++ +G+GK+ + + ++ +l+  ++        +lv+aps+ +v++l e +++ gl+ +++  +++++ 
     EPX74570.1 417 IQGPPGTGKTVTSASIVYHLATIQNrkrkspLPVLVCAPSNVAVDQLAEKINRtGLRVIRVAAKSREDI 485
                    7899*****988887776665544445688899***************999652566555554333333 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.4   0.00046      0.42      16     135 ..     406     544 ..     400     578 .. 0.60

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00046
      AAA_16  16 lervrsgrpelvllsGesGvGKsslvrellralekdggiflrgkcdql........esaipysalaqalareellrqlldeaesaeleawrekleeala 106
                 +++v s   +l l+ G++G+GK+    ++  +l  +    ++ + +++        +s+++ ++la+ + r +l     ++         re +e++++
  EPX74570.1 406 VRSVLSK--PLSLIQGPPGTGKTVTSASIVYHLA-T----IQNRKRKSplpvlvcaPSNVAVDQLAEKINRTGLRVIRVAA-------KSREDIESSVS 490
                 4444444..7889**********99988884333.2....34444444122222222223333344444333333333322.......22333333333 PP

      AAA_16 107 .........................avpelagaeasrllellkrll.allsrder 135
                                          + +el+ ++++rl+ l++++  +ll+  ++
  EPX74570.1 491 flslheqiknyqgnpelqrlfklraENNELSLQDEKRLRILIAAAErELLRA-AH 544
                 5555556667777888888888888888888888888888888888444444.66 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00037      0.33       3      41 ..     415     453 ..     413     469 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00037
                 EEEEC-TTTCHHHHHHHHHHHHCTS-SCCCC-SEEEEEE CS
       NACHT   3 vilqGeaGsGKTtLlqklalawaegklpqgafklvFfls 41 
                 +++qG++G GKT+  ++++  +a+ +  + + +l+ +++
  EPX74570.1 415 SLIQGPPGTGKTVTSASIVYHLATIQNRKRKSPLPVLVC 453
                 79*********************9998887777666555 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.2   0.00042      0.37       2      22 ..     416     436 ..     415     546 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00042
                 EEESSTTSSHHHHHHHHHHHH CS
         AAA   2 llyGppGtGKTllakavakel 22 
                 l+ GppGtGKT +  +++ +l
  EPX74570.1 416 LIQGPPGTGKTVTSASIVYHL 436
                 788*********999888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (930 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       663  (0.0369792); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        68  (0.00379274); expected 17.9 (0.001)
Passed Fwd filter:                        20  (0.00111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              20  [number of targets reported over threshold]
# CPU time: 0.85u 0.32s 00:00:01.17 Elapsed: 00:00:00.52
# Mc/sec: 5333.26
//
Query:       EPX74571.1  [L=854]
Description: CMGC/DYRK/DYRK2 protein kinase Ppk5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      2e-56  191.3   0.0      3e-56  190.7   0.0    1.3  1  Pkinase         Protein kinase domain
    1.9e-23   83.1   0.0      1e-21   77.4   0.0    2.1  2  Pkinase_Tyr     Protein tyrosine kinase
     0.0034   17.3   0.0     0.0058   16.6   0.0    1.3  1  APH             Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.064   12.6   0.0       0.11   11.8   0.0    1.3  1  Kinase-like     Kinase-like
      0.073   12.7   0.1       0.15   11.7   0.1    1.4  1  Choline_kinase  Choline/ethanolamine kinase
       0.12   12.0   0.0       0.28   10.7   0.0    1.6  1  RIO1            RIO1 family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  190.7   0.0     1e-59     3e-56       1     264 []     504     800 ..     504     800 .. 0.87

  Alignments for each domain:
  == domain 1  score: 190.7 bits;  conditional E-value: 1e-59
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS......CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHH..H CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklk......hpnivrlyevfeekdelylvleyveggeladlle..r 91 
                 ye++ k+G+GsfG+V+++++ + gk vA+K+i+++ +     +++l E  il++l        +ni+r+++ f+  ++l++v+e++  ++l+++++  +
  EPX74571.1 504 YEVVDKVGKGSFGEVLRCIDYKHGKLVAIKVIRNRVKCY---DQALVEAGILERLTkdetfmESNIIRYFDHFNFRNHLCIVTELLG-ENLFEVIRdnN 598
                 78999***************************9997665...4589999999998766666689*********************99.55*****9644 PP

                 HSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTE..EEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHH CS
     Pkinase  92 kgslseeeakkiakqilegleylHskgiiHrDlKpeNiLidekge..lKitDFGlakelessskltsfvgtseYlAPEvlkeneyskkvDvWslGvily 188
                  + ++   +k++++q+l++l++l +++iiH+DlKpeN+L+ ++ +  +K++DFG +++++++    ++  ++ Y+APEv+ + +y+k++D+Ws G+il+
  EPX74571.1 599 YKGFPLIIVKSFTAQLLKSLNFLQKQRIIHCDLKPENLLLCDHTNarVKLIDFGSSCRYNEK--IYTYLQSRFYRAPEVILGMPYGKEIDIWSFGCILA 695
                 445**********************************9987444446*************96..699******************************** PP

                 HHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCT...SHH...HHHTTS.................................-HHHHHHHHHHT-SSGCC CS
     Pkinase 189 elltgkppfsgekgkekvekeldqlekilkilg...etkeklpeasei.................................seeakdllkkllkkdpkk 251
                 el+tg p+f+g ++       ++ql  i+++lg    +   + ++s++                                 ++ ++dl++k+l++dpkk
  EPX74571.1 696 ELYTGIPLFPGANE-------AEQLGYIMEVLGippRELILISTRSKLyfdshgqahpilnsrgrplipstkrldqltrckNPLFLDLISKCLQWDPKK 787
                 **********5555.......4555566667775542223333333336677778899***************************************** PP

                 STTHHHHHTSGGG CS
     Pkinase 252 Rltaeellqhpyl 264
                 R+t+e++l+h+++
  EPX74571.1 788 RITVEMALRHEFI 800
                 **********996 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.4   0.0   3.5e-25     1e-21       4     213 ..     507     711 ..     504     726 .. 0.82
   2 ?    3.5   0.0     0.013        37     218     253 ..     756     792 ..     740     798 .. 0.84

  Alignments for each domain:
  == domain 1  score: 77.4 bits;  conditional E-value: 3.5e-25
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS.-.....BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHT CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkkl.k.....hpnivkllgvctkeepllivteyvkgGdLlkfLrkk 95 
                   +k+G+G+fG+V ++  +    k+   Va+K+++++ +    ++ l ea i+++l k       ni+++      +++l+ivte++ + +L + +r++
   EPX74571.1 507 VDKVGKGSFGEVLRCIDY----KHGKLVAIKVIRNRVKCY--DQALVEAGILERLtKdetfmESNIIRYFDHFNFRNHLCIVTELLGE-NLFEVIRDN 597
                  6799***********999....88899******8877766..55566677776653211111679********999********9965.899****** PP

                  CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE..TTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHH CS
  Pkinase_Tyr  96 ekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse..nkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsf 191
                  + + + l  + sf++q+ k +++L++++++H dl   N Ll++  n  vk+ DfG + +  +++ y+  +    +  + apE++  + + ++ D+Wsf
   EPX74571.1 598 NYKGFPLIIVKSFTAQLLKSLNFLQKQRIIHCDLKPENLLLCDhtNARVKLIDFGSSCRY-NEKIYTYLQ----SRFYRAPEVILGMPYGKEIDIWSF 690
                  9****************************************9755779*******99887.333333222....34578******************* PP

                  HHHHHHHHTTSSGTTTTSHHHH CS
  Pkinase_Tyr 192 GvllwEiftlgespypglknee 213
                  G +l E++t g   +pg +++e
   EPX74571.1 691 GCILAELYT-GIPLFPGANEAE 711
                  ********9.766666665555 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.013
                  HHTTEES-BBTTSBHHHH.HHHHHHT-SSGGGS--HH CS
  Pkinase_Tyr 218 lkegkrlekpekcpeely.elmkkcweedpeeRptfs 253
                  + + krl++ + c++ l  +l++kc++ dp++R t +
   EPX74571.1 756 IPSTKRLDQLTRCKNPLFlDLISKCLQWDPKKRITVE 792
                  56788999999999887549*************9986 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.9e-06    0.0058     152     196 ..     610     654 ..     554     657 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.9e-06
                 HHHHHHHH--SSS-EEEE-SS-SGGGEEEC...TTEEEEE---TT- CS
         APH 152 vlaalaallpgelptvllHgDlhpgNllvd.pddgrvtGviDfeda 196
                 + a+l++ l   ++++++H+Dl+p Nll+   ++ rv  +iDf+ +
  EPX74571.1 610 FTAQLLKSLNFLQKQRIIHCDLKPENLLLCdHTNARV-KLIDFGSS 654
                 445555555559*****************97777787.8****965 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   3.7e-05      0.11     147     212 ..     608     675 ..     574     691 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.7e-05
  Kinase-like 147 lllTlqlirlaanLqakglvhgkftvdnlll..dekgglmlggftaLvragtkvvlsevekgfaPpEl 212
                  +  T+ql++    Lq++ ++h +++++nlll  + + +++l +f++  r+ +k       + +  pE+
   EPX74571.1 608 KSFTAQLLKSLNFLQKQRIIHCDLKPENLLLcdHTNARVKLIDFGSSCRYNEKIYTYLQSRFYRAPEV 675
                  46799************************994345689************999886566677777776 PP

>> Choline_kinase  Choline/ethanolamine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   4.9e-05      0.15     147     178 ..     626     659 ..     591     663 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 4.9e-05
                     EE-S--SGGGEEE..-CTTEEEE--GTT-E.EEE CS
  Choline_kinase 147 fcHnDlqegNill.nkeekklvlIDFEYag.yny 178
                       H+Dl ++N+ll ++++ ++ lIDF  ++ yn 
      EPX74571.1 626 IIHCDLKPENLLLcDHTNARVKLIDFGSSCrYNE 659
                     56********9986788899******75442665 PP

>> RIO1  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   9.4e-05      0.28      82     154 ..     580     656 ..     562     666 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 9.4e-05
                 EEEEE--EETTEEGGBHHHCG.-.HHHHHHHHHHHHHHHHHHHHTSTEEESS-STTSEEEETT...EEEE--GTTEEE CS
        RIO1  82 vlvmefigedgvaapklkdve.e.eeeaeelyeevleemrklykeaglvHaDLSeyNvlvded...kvviIDvsQave 154
                 ++v e++ge+ +++ + ++++       ++  +++l++   ++++++++H+DL   N+l+ +    +v +ID++ +  
  EPX74571.1 580 CIVTELLGENLFEVIRDNNYKgFpLIIVKSFTAQLLKS-LNFLQKQRIIHCDLKPENLLLCDHtnaRVKLIDFGSSCR 656
                 67888888777777777777743455667777777775.56778**************995433368999**987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (854 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       666  (0.0371465); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.72u 0.32s 00:00:01.04 Elapsed: 00:00:00.50
# Mc/sec: 5163.85
//
Query:       EPX74572.1  [L=1322]
Description: ribosome biogenesis protein Urb2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.1e-34  118.7   2.7    3.1e-34  118.7   2.7    3.9  4  Urb2       Urb2/Npa2 family
  ------ inclusion threshold ------
       0.02   13.9   0.1      0.034   13.2   0.1    1.2  1  Birna_VP2  Birnavirus VP2 protein


Domain annotation for each model (and alignments):
>> Urb2  Urb2/Npa2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.3   2.4    0.0077        69      21     139 ..     140     307 ..     101     311 .. 0.70
   2 ?   -0.0   0.9     0.079   7.1e+02      43      85 ..     287     400 ..     248     487 .. 0.48
   3 ?   -2.4   0.0      0.43   3.9e+03      14      85 ..     863     940 ..     852     979 .. 0.64
   4 !  118.7   2.7   3.4e-38   3.1e-34       2     204 ..    1094    1321 ..    1093    1322 .] 0.93

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.0077
        Urb2  21 ynveqtLslvstvlspssaeess.....eifsalckllssilrhhrdklsgrfhlllavlqaLlellra......................eetsgste 92 
                  +v+ +Ls +++++    +++++     +i + +ckl+ss lr   + l+  +  l  +l+++l+ll++                      + t ++  
  EPX74572.1 140 DQVSDLLSRFCHIFALHPNTADDaiadsQIQKVFCKLISSSLRATSNTLKASVYFLSRSLNGILQLLSSvdienknyefiksilttcilspS-TLEALV 237
                 456667777777777766665558999999999***********************************988877766666666555554331.334444 PP

        Urb2  93 lsakhAkalaRlltslceptvssv.........................ssLtsetsslkkplgkhapllLv 139
                  ++++ ++l  ll++l   +v  +                         +  +++++   k +  h+ +lL+
  EPX74572.1 238 AKKESNENLFSLLKNLSVDQVDLKsvpslfqifldsissfmsdsgkhisQ--QKASDLTYKLFVEHMKYLLT 307
                 45555556666666666665544466666666666666666666655431..46667777777777777776 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.079
        Urb2  43 s..............................eifsalckllssilrhhrdklsgrfhlllavlqaLlellra........................... 84 
                 +                              e f+ lc++l+s   h+ +  ++ f +l+ + +  ++ l++                           
  EPX74572.1 287 QqkasdltyklfvehmkyllthveapdttvfEAFRLLCEMLESDKVHRGNPDKTTFDMLVTLARLCMDNLSKrdnrptlwrifasllnidfdsvlplsn 385
                 244444444444444444455555555556677777777777766666666666666666666666666666555555555555555555555555554 PP

        Urb2  85 ..............e 85 
                               +
  EPX74572.1 386 elwnfidvchpeenQ 400
                 443333333333320 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 0.43
        Urb2  14 kpalfsqynveqtLslvstvlspssaeess.eifsalckllssilrhhrdklsgrfhlllavlqaLlellra.....e 85 
                 k+  +  y v+ +L+ + + + +++++ ++ e+ s+l     ++l      l+++  l +a+l++Lle+  +     +
  EPX74572.1 863 KQGHVPMYGVSVFLNELVQYIPSIRQAPNDeEVVSKLKLCSGMVLNEISYTLDNFEVLHIALLTKLLECCNSflrtfQ 940
                 666666777777777777766666666555566666666666666666667777777777788888887775333330 PP

  == domain 4  score: 118.7 bits;  conditional E-value: 3.4e-38
        Urb2    2 aalevlesllskkpalfsqynveqtLslvstvlspssaeess....eifsalckllssilrhhrdklsgrfhlllavlqaLlellra.........e 85  
                  ++l+vl+ + +k + +++  +++ ++s++s++ls+ ++ + s     i s+++++l+ +l +hr+ +sgrfh+l  +l++ l+++++         +
  EPX74572.1 1094 SILDVLDVFANKSSKVCNVDSFNFIISSLSSLLSSRKSISCSydenLIISRIISVLRGMLYNHRSYMSGRFHVLFGILKKVLHCMFKkttnsfskaD 1190
                  799********************************8877766999889**************************************96666665551 PP

        Urb2   86 e.......tsgstelsakhAkalaRlltslceptvssv.....ssLtsetsslkkplgkhapllLvaYiklqleggiprevreaLepGiyaildvls 170 
                  +       ++ s  +s+ +  a++Rll+++++p+ ++      s+Lt++++++ k+ +kh  +lL+++++lq+++ i+ +++e L++++y++   ls
  EPX74572.1 1191 NvirtpkwFKPSMMISDYNVIAMSRLLNTWMNPNLMHDsnkkaSTLTDSERQFIKASTKHFVFLLIEFLSLQVNFMIDLDAKERLTEAFYSVYGNLS 1287
                  16666778999999*******************888889999999*****************************99********************* PP

        Urb2  171 qeelrllnaaLdasgravfkeLykdYkkfgKwkg 204 
                    e+++ +++++a+ r++f ++++++ +f Kw++
  EPX74572.1 1288 TYEKHMASTSMNAPTRSLFHRFVDNWSRFAKWQE 1321
                  ********************************97 PP

>> Birna_VP2  Birnavirus VP2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   3.8e-06     0.034      91     142 ..     173     224 ..     153     230 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 3.8e-06
   Birna_VP2  91 ygrLvsrslsvrsstLPaGvyaLnGtlnavtfqGsLsevedlsynsllslta 142
                 +++L+s sl   s tL a vy L   ln++    s  ++e+ +y+ + s+ +
  EPX74572.1 173 FCKLISSSLRATSNTLKASVYFLSRSLNGILQLLSSVDIENKNYEFIKSILT 224
                 7******************************999999********9999754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1322 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       813  (0.0453455); expected 358.6 (0.02)
Passed bias filter:                      464  (0.0258799); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.85u 0.34s 00:00:01.19 Elapsed: 00:00:00.51
# Mc/sec: 7831.13
//
Query:       EPX74573.1  [L=557]
Description: vacuolar sorting protein Vps45 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   6.2e-126  421.9   5.3   7.1e-126  421.7   5.3    1.0  1  Sec1      Sec1 family


Domain annotation for each model (and alignments):
>> Sec1  Sec1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  421.7   5.3    4e-130  7.1e-126       1     575 []      22     548 ..      22     548 .. 0.84

  Alignments for each domain:
  == domain 1  score: 421.7 bits;  conditional E-value: 4e-130
                 EEEEE-HHHHHHHHTT--HHHHHTTTEEETT..T.--S-.....BTTSEEEEEE-S-HHHHHHHHHHHHSS-SBS-EEEEESS---HHHHHHHHH..S. CS
        Sec1   1 KvLvlDkelskilssvlkvsdlleegVtkieklk.krepskrealphlkaiyflrptkenidrlakdfisarrykeyhifftprlseslleglakade. 97 
                 KvL+l++e+++i+ss +++s+lle++++    ++ +re+     l+hlk+i flrpt ++++ l++   + ++y+eyh++f++ ls+s+le+la++d+ 
  EPX74573.1  22 KVLLLERETTRIVSSSITQSNLLEHQIYLTVLVEnQREK-----LRHLKCIAFLRPTTQTLRFLCE-ELRDPKYSEYHLYFSNILSKSFLERLAESDDf 114
                 9***************************44444335555.....*********************5.566799************************99 PP

                 G.GGGEEEEE----SEEEETTEEE-S.TTHHHHSTTG.....GG.......--HHHHHHHHHHHHHHH-..--EEEE-TT-HHHHHHHH.......... CS
        Sec1  98 evvkkvklkelnldfvplesdlfsln.pelplsfrdlyldndnsaleeeieslldriakgLlsvllslekkiPiirykgsaasmvakkladelkekids 195
                 evvk+v+  e++ld++++++dl sln p+  ++ +d       s+    ++s+l+r+ +gL+s+llsl kk P iry    +s+++ kla+e+    ++
  EPX74573.1 115 EVVKSVQ--EIFLDYLVVNNDLASLNvPHIIDNTPD-------SW----LDSSLERTQQGLISLLLSL-KKKPLIRYDV--NSFLSLKLAEEIGYVTQN 197
                 *******..****************87554333333.......46....4559***************.99*******9..9*************9999 PP

                 .HHHHTTT--SS--EEEEE-GGG-SSTTTS---BHHHHHHHHS--BTEEEEEE--SSSEEEEEE--TT...-TTHHHHTTSBHHHHHHHHHHHHHHHHH CS
        Sec1 196 .kknfesessrqrpvLiIlDRsvDlvtpllhqwTYqaliddllgglnnnnvvleeepkeekeaelvess.sDeffaelrhlnfgevgeklkkeakeyqe 292
                  ++ f++ +s+++ +L+IlDR+ D++tpll+qwTYqa++++l+g +nn++v  +++++  +++e+v+++  D+f++e+r++nfg++g k+k++++ +q+
  EPX74573.1 198 eTQLFNFRKSDTPTILLILDRKNDPITPLLTQWTYQAMVHELFG-INNGRVSFQNTSVPGETTEIVLNPtLDPFYNETRFDNFGKLGVKIKEYVSHLQT 295
                 77777777***********************************8.988888888888****************************************** PP

                 HHHTTT....-TTHHHHHHHHHH-GGGHHHHHHHHHHHHHHHHHHHHS-HHH.HHHHHHHHHHHHSS--.B--..-HHHHHHHH-TTS-H.HHHHHHHH CS
        Sec1 293 enekkrn.gakesiadlkkfvaklpelqeekkklskHtnlaeellkevkkrkldellelEqdlatgesdkkikekkvieeliaddeptseledklRLll 390
                 ++ +k+  +  esiad+k+f++ +pe++ +++++ kH++l++e++ +v++++l+e++e+Eq+++++e + +i + + i+ li++  ++se ++klRL+ 
  EPX74573.1 296 KS-MKKAnEI-ESIADMKQFLETYPEYRRLSGNVNKHVSLVSEISLKVQQENLLEIGEVEQSMVCNEAE-AI-NFSYIQRLISS--SISE-NTKLRLAS 387
                 **.5554244.6*****************************************************8544.44.445799***97..4446.7******* PP

                 HHHH....-B.-HT--GG....GGHHHH..GGGGG........---.BGGG-------.........---------S.......TT-.----HHHHHHH CS
        Sec1 391 lyslv.egglkekelkellrelvqsaly..gleylktlrsleklgllkkrkgkksskkkss..lklikeeedeesnyd....lsgvs.ryaPllvrlve 479
                 ly+l+ e ++++ ++  l+  l+ + +   + +++ tl +l+++g    r+g  + ++ s+  ++  +         +    +++v+ ++ P l+++ve
  EPX74573.1 388 LYALRfE-KIDPAKVASLQGLLLANGVSpiKAAIIPTLLHLSGAGA---RQG--DIFPPSNifSRARSGF-------KglrgVENVYiQHNPFLKTIVE 473
                 *****77.88888888886666664444554788999999998866...555..3333332332222222.......13344457************** PP

                 HHTTT-S-TTTS-BSS-GGGS--------------------------S-EEEEEEEEEE-HHHHHHHHHHT...TSSSEEEEEEEEE--HHHHHH. CS
        Sec1 480 alikgkklssespslskkdpsqeesssslrsakktnsaskesaekkkkqrviVffvGGvTysEiralrllskqekknkeiiigttsilnpksflee 575
                 +li+ +kl++++ ++++ d                     + ++ +k+q++i+++vGG+Ty+E+r + ++++ +  + ++++++t+i+n++s++++
  EPX74573.1 474 DLIQ-GKLKESTHPYYDVD-------------------VPAHNAHEKPQDIIIMMVGGATYEEARFISEINATH-PGIRVVLAGTTIHNSSSYIDD 548
                 ****.66666666665433...................233333334699*********************865.7899**************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (557 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       466  (0.0259914); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 4043.59
//
Query:       EPX74574.1  [L=286]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.5e-11   41.4   0.9    1.9e-10   40.5   0.9    1.5  1  G-patch    G-patch domain
     0.0011   19.0   0.1      0.004   17.2   0.1    1.9  1  G-patch_2  G-patch domain


Domain annotation for each model (and alignments):
>> G-patch  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.5   0.9   2.1e-14   1.9e-10       1      34 [.     238     271 ..     238     275 .. 0.94

  Alignments for each domain:
  == domain 1  score: 40.5 bits;  conditional E-value: 2.1e-14
     G-patch   1 tsniGvkmLqkmGWkpGqGLGkkeqGiaePieak 34 
                 t+n G  +L+k GW +GqGLG ++qGi++P+++k
  EPX74574.1 238 TKNYGKILLKKFGWNEGQGLGLSNQGIINPLQTK 271
                 6899999************************987 PP

>> G-patch_2  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.1   4.5e-07     0.004      13      49 ..     237     273 ..     230     282 .. 0.86

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 4.5e-07
   G-patch_2  13 PVeeFGaAlLrGMGWkegqgigknkkgrvkpeepkrR 49 
                 P  ++G  lL+  GW+egqg g +++g ++p + k+ 
  EPX74574.1 237 PTKNYGKILLKKFGWNEGQGLGLSNQGIINPLQTKPS 273
                 5678999********************9999888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       976  (0.0544369); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2083.03
//
Query:       EPX74575.1  [L=711]
Description: BRO1 domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.1e-49  167.8   7.4    6.6e-49  166.7   7.4    1.5  1  BRO1            BRO1-like domain
    1.6e-16   60.5  10.5    1.6e-16   60.5  10.5    2.0  2  ALIX_LYPXL_bnd  ALIX V-shaped domain binding to HIV
  ------ inclusion threshold ------
       0.15   12.2   0.3        7.3    6.7   0.0    3.1  3  HJURP_C         Holliday junction regulator protein family C-


Domain annotation for each model (and alignments):
>> BRO1  BRO1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.7   7.4   1.1e-52   6.6e-49       1     349 [.       3     331 ..       3     352 .. 0.89

  Alignments for each domain:
  == domain 1  score: 166.7 bits;  conditional E-value: 1.1e-52
                 XXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.....XXXX.XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXX CS
        BRO1   1 llsiplKkteekevdlkkpLknyIsetygsqdpeafeddlaelnklRqdavrksankdsesglelllkYyaqLellelrfpieeqslkveFtWydafss 99 
                 l+++plK+t  +++d++  +k++  ++y   ++e+++++l+e ++lR++++       + +  +l   Yy++L +le+++  +      +FtW+ ++ss
  EPX74575.1   3 LIELPLKNT--SPLDIEVWIKDL--SEYPTVTKENLRKELEEYQELRKKLCVD---FPTFQDAQLANVYYRMLGALEEKLAGS---APTSFTWNFSYSS 91 
                 689******..669988888885..5565577899**************8843...336888999999************764...589********99 PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXX.XXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXXXX.XX CS
        BRO1 100 skkvtqsslafEkasvLFniaalysqlaasqnrstdeglkrackyfqqAAgvfqylkenflhapteeesedlspetlkaLeklmlAqAqecfleka.ik 197
                 s+  + ++++fEka+ ++ +a +y   a+++  +++ ++ +a + +q  Ag f+++ + +l       s d++++++ka e+  lAqAq ++++k  ++
  EPX74575.1  92 SQLEEYNDICFEKANFIYRMANVYQTQAKACLLKQEPNFAQAHQFLQFCAGSFNFIGKYCLYLG----SLDFEHSLIKAWEHCFLAQAQSLVYHKGlLT 186
                 99999*****************************************************888877....9***************************999 PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXX.......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..... CS
        BRO1 198 dnkkdsliaKlaaqvaelYeealealkkselidekeevlkklldksWikhvqvKashfkAlaqyrqalaaeeakkyGeeiarlqkAlellkealkskka 296
                 ++ +d +++Kla+ +a++Y++a++++++s+ +++            ++++  + + +++A ++++ + +a ++  yG+++a+l+ A  ++k+al ++  
  EPX74575.1 187 KSIRDLTLSKLANGIAKMYDDAHHSFENSTGAQS-----------YFVHVTFLESLYYRASSYFYLSKDAVSKYMYGKQVAFLELAVVYCKKALAKRF- 273
                 9*************************65554444...........77788888999*************************************54332. PP

                 ............XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        BRO1 297 eel......ledlkglkdvveeklkeaekDNdlIYheevPsesslpeikkaslvkaipl 349
                  e+       e+l+ l + ++++ ++a++DNd++ +e+vPs +++++ + + +v++  +
  EPX74575.1 274 -EVptsikvYENLEILLSDLQDQFRQAKRDNDFVHLEQVPSLQDISSCEIVMMVQSAIP 331
                 .33446677****************************************9999999776 PP

>> ALIX_LYPXL_bnd  ALIX V-shaped domain binding to HIV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0      0.51   3.1e+03      75      88 ..      32      45 ..      28      75 .. 0.72
   2 !   60.5  10.5   2.7e-20   1.6e-16       9     295 .]     412     684 ..     410     684 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 0.51
  ALIX_LYPXL_bnd 75 aelraelqkyreil 88
                    ++lr+el++y+e+ 
      EPX74575.1 32 ENLRKELEEYQELR 45
                    34555555555543 PP

  == domain 2  score: 60.5 bits;  conditional E-value: 2.7e-20
  ALIX_LYPXL_bnd   9 kaeevrsqgglqrlekllqdlqelkerneeiLdeieklLdeEesedeklrakygt.rWtrqpSseltaelraelqkyreileeAsesDkivrqkl 102
                     k ++++++gg + l+  + +l +l++++ +++++ +++L++E+++++ ++ kygt rW+  +S+++++elr+el+++r +l +  +  +++++ +
      EPX74575.1 412 KYDKIKESGGQELLRTRITSLMTLSKDVSNVFHQSNDILNNEQEKNDFYKLKYGTdRWKIVSSEIASRELRNELESLRINLINFENLANDTKKLY 506
                     7789***************************************************55************************************** PP

  ALIX_LYPXL_bnd 103 qenkedlelLsgpeeeleaalpssssaaasesveeqirklrsllekldelkaereql.lkdlkekaendDitpklltekkrdiaanefealfeee 196
                     +++++    L+++ + l   ++s ++ + s+ + + ++++ + +++++++k++r ++ l+++++++ ++   + l+t   +        + f+ee
      EPX74575.1 507 DKINPIY--LTTEPKLLITNFSSTTE-TLSPLEINFLSTINNQIQRWESIKETRSSIgLHEIESQYFSK--MTSLMTSDPN-----ILISGFKEE 591
                     **99864..44444555555565555.46788889999******************7477777544444..4446665555.....566779999 PP

  ALIX_LYPXL_bnd 197 lekydplqeqleqslakqeellkeiqeaneefeqskksdseqsqrqreevlqkleaaydkykelksnleeglkFYndltelleklqkkvkdfvfa 291
                     l+k+       ++++++q +l   i e  +++++++  ++   +++  ++l ++++ y+ y e ++  e g++F n l +l +k++ ++  + ++
      EPX74575.1 592 LSKLWNT----NEQKQSQTRLFDSISESIDNLARAYDARQ--KKKSATQILLDINEMYELYWEAMNRSETGVTFGNRLLDLFTKIELECTGYANQ 680
                     9966554....55568899999999999999999988887..778899*********************************************** PP

  ALIX_LYPXL_bnd 292 RrtE 295
                     R +E
      EPX74575.1 681 RTEE 684
                     *998 PP

>> HJURP_C  Holliday junction regulator protein family C-terminal repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.2   7.2e+03      38      57 ..     264     281 ..     264     283 .. 0.78
   2 ?    6.7   0.0    0.0012       7.3      15      29 ..     404     418 ..     399     419 .. 0.86
   3 ?    1.6   0.0      0.05     3e+02      24      50 ..     609     634 ..     600     639 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.2
     HJURP_C  38 yclsspklqsntkmpvsvpV 57 
                 yc ++  l +++++p s+ V
  EPX74575.1 264 YCKKA--LAKRFEVPTSIKV 281
                 66666..5679******988 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0012
     HJURP_C  15 eltprtenkYreIke 29 
                 + ++ te+kY++Ike
  EPX74575.1 404 KDLGATEKKYDKIKE 418
                 56899*********9 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.05
     HJURP_C  24 YreIkeeFDkLhqkyclsspklqsntk 50 
                 ++ I e +D+L + y   ++k +s t+
  EPX74575.1 609 FDSISESIDNLARAYDARQKK-KSATQ 634
                 578************999966.66665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (711 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       934  (0.0520944); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.63u 0.26s 00:00:00.89 Elapsed: 00:00:00.43
# Mc/sec: 5006.57
//
Query:       EPX74576.1  [L=431]
Description: AAA family ATPase Vps4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.9e-45  153.2   0.0    9.2e-45  152.3   0.0    1.5  1  AAA              ATPase family associated with various cellul
    5.8e-25   87.1   0.0    2.2e-24   85.2   0.0    2.1  1  Vps4_C           Vps4 C terminal oligomerisation domain
    9.8e-23   80.0   4.8      2e-22   79.0   4.8    1.6  1  MIT              MIT (microtubule interacting and transport) 
    1.3e-07   31.3   0.0      3e-07   30.1   0.0    1.6  1  AAA_lid_3        AAA+ lid domain
    6.6e-06   26.6   0.3    0.00071   20.0   0.1    2.5  2  AAA_16           AAA ATPase domain
    7.2e-06   25.8   0.0    1.4e-05   24.9   0.0    1.5  1  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    3.3e-05   24.2   0.5      0.032   14.5   0.0    2.6  2  AAA_22           AAA domain
    9.8e-05   22.4   0.0    0.00048   20.2   0.0    2.0  2  AAA_14           AAA domain
     0.0001   22.3   0.0    0.00039   20.4   0.0    2.1  1  AAA_5            AAA domain (dynein-related subfamily)
     0.0001   22.1   0.0    0.00018   21.3   0.0    1.3  1  IstB_IS21        IstB-like ATP binding protein
    0.00032   20.0   0.0    0.00066   19.0   0.0    1.5  1  TIP49            TIP49 P-loop domain
     0.0006   19.0   0.0     0.0011   18.2   0.0    1.4  1  DUF815           Protein of unknown function (DUF815)
    0.00097   19.3   0.0      0.002   18.3   0.0    1.6  1  AAA_33           AAA domain
     0.0011   19.5   0.0     0.0038   17.8   0.0    2.0  2  AAA_18           AAA domain
     0.0015   18.7   0.0     0.0029   17.7   0.0    1.5  1  AAA_2            AAA domain (Cdc48 subfamily)
     0.0032   17.2   0.0     0.0078   16.0   0.0    1.6  1  AAA_24           AAA domain
     0.0033   17.8   0.0      0.013   15.9   0.0    2.0  1  RNA_helicase     RNA helicase
  ------ inclusion threshold ------
       0.01   16.3   0.0      0.024   15.1   0.0    1.7  1  AAA_17           AAA domain
      0.012   15.2   0.1       0.67    9.5   0.1    2.2  2  AAA_25           AAA domain
       0.03   13.7   0.0        6.1    6.2   0.0    2.4  2  TniB             Bacterial TniB protein
      0.047   12.8   0.0      0.076   12.1   0.0    1.2  1  Parvo_NS1        Parvovirus non-structural protein NS1
      0.049   13.6   0.0       0.79    9.6   0.0    2.2  2  NACHT            NACHT domain
      0.051   12.9   0.1        0.1   11.9   0.1    1.4  1  Mg_chelatase     Magnesium chelatase, subunit ChlI
      0.079   12.9   1.0        2.5    8.0   0.0    2.9  3  ATPase_2         ATPase domain predominantly from Archaea
      0.081   12.4   0.1       0.21   11.0   0.1    1.6  1  PhoH             PhoH-like protein
      0.085   12.6   0.0       0.53   10.0   0.0    2.4  2  Sigma54_activat  Sigma-54 interaction domain
        0.1   11.4   0.8       0.16   10.7   0.8    1.2  1  BRO1             BRO1-like domain
       0.11   12.6   0.0        0.2   11.8   0.0    1.4  1  Torsin           Torsin
       0.11   11.8   0.1         12    5.1   0.0    2.3  2  ATPase           KaiC
       0.12   11.7   0.1        1.4    8.2   0.0    2.3  2  Zeta_toxin       Zeta toxin


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.3   0.0   1.5e-47   9.2e-45       1     132 []     164     293 ..     164     293 .. 0.98

  Alignments for each domain:
  == domain 1  score: 152.3 bits;  conditional E-value: 1.5e-47
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTS CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkk 99 
                 +llyGppGtGK++lakava+e+g++f++is s+l+sk++gese+ +r+lf+ a+e++ psi+fiDEid+l++srs++ese+++r+  ++l +++gv k+
  EPX74576.1 164 ILLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQK-PSIIFIDEIDSLCGSRSEGESESSRRIKTEFLVQMNGVGKD 261
                 69******************************************************8.***************************************** PP

                 SSTEEEEEEESSGGGSTHHHHSTTSSEEEETTS CS
         AAA 100 eskvivigatnrpdkldpallrgRfdrkieiel 132
                 es v+v+gatn p++ld+a++ +Rf+++i+i+l
  EPX74576.1 262 ESGVLVLGATNIPWTLDSAIR-RRFEKRIYIPL 293
                 *********************.7*******985 PP

>> Vps4_C  Vps4 C terminal oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.2   0.0   3.7e-27   2.2e-24       2      61 .]     369     428 ..     368     428 .. 0.99

  Alignments for each domain:
  == domain 1  score: 85.2 bits;  conditional E-value: 3.7e-27
      Vps4_C   2 tPCspgdpgaiemtwmdipsdkllePpvtlkDflkalkkarptVskeDLekheeFTkefG 61 
                 tPCspgdp+a+  twmd++++++leP ++++Df  a+kk++pt ++ D++kh++FTk+fG
  EPX74576.1 369 TPCSPGDPEAFAATWMDVNGSDILEPRLSVRDFYTAVKKVKPTLNAGDIQKHIQFTKDFG 428
                 9**********************************************************9 PP

>> MIT  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.0   4.8   3.4e-25     2e-22       1      64 [.       7      71 ..       7      72 .. 0.98

  Alignments for each domain:
  == domain 1  score: 79.0 bits;  conditional E-value: 3.4e-25
         MIT  1 ldkAlelvkkAveeDnagnyeeAlelYkealelLlqalk.ekneerrellrekieeYleRaeeLk 64
                l+kA++lvk+A++ Dna+ y +A+++Y++al+++++alk ekne+++e +r k+ eYl+Rae+Lk
  EPX74576.1  7 LSKAISLVKTAIDHDNAERYGDAYKYYQNALDYFMMALKyEKNEKSKEIIRGKVLEYLDRAEKLK 71
                89*************************************88***********************9 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.1   0.0   5.1e-10     3e-07       3      33 ..     318     348 ..     316     357 .. 0.93

  Alignments for each domain:
  == domain 1  score: 30.1 bits;  conditional E-value: 5.1e-10
   AAA_lid_3   3 dlkeLAerTeGySGADlaalcreAallAlrr 33 
                 d+keL ++TeGySG D+a ++r A ++ +r 
  EPX74576.1 318 DFKELGRMTEGYSGSDIAIVVRDAIMEPVRK 348
                 89************************99986 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.1   1.2e-06   0.00071      21      51 ..     157     188 ..     149     212 .. 0.79
   2 ?    3.7   0.0      0.12        73     123     146 ..     209     231 ..     205     253 .. 0.80

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 1.2e-06
      AAA_16  21 sgrp.elvllsGesGvGKsslvrellralekd 51 
                 s  p + +ll+G++G+GKs l++++++++  +
  EPX74576.1 157 SRKPwSGILLYGPPGTGKSYLAKAVATEAGST 188
                 3445699*******************977655 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.12
      AAA_16 123 lkrllallsrderplvlvlDdlqw 146
                 +++l++ +++ ++p ++++D+++ 
  EPX74576.1 209 VRQLFEMARE-QKPSIIFIDEIDS 231
                 5556677777.9*********994 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.0   2.4e-08   1.4e-05      31      96 ..     159     232 ..     126     242 .. 0.73

  Alignments for each domain:
  == domain 1  score: 24.9 bits;  conditional E-value: 2.4e-08
      RuvB_N  31 ealdhvllyGpPGlGkttlakiiakelgvkl.kitsgPvlek....agdlaalltnl...eekdvlfideihrl 96 
                 ++   +llyGpPG Gk+ lak +a+e g+++  i+s+  ++k    +  l+  l ++   ++  ++fidei  l
  EPX74576.1 159 KPWSGILLYGPPGTGKSYLAKAVATEAGSTFfSISSSDLVSKwmgeSERLVRQLFEMareQKPSIIFIDEIDSL 232
                 456789**********************986256666666653222455777676663223457*******887 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   5.4e-05     0.032       8      29 ..     164     185 ..     159     196 .. 0.88
   2 ?    6.9   0.0     0.012         7      74     105 ..     204     235 ..     195     261 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 5.4e-05
      AAA_22   8 lvvtGesGtGKTtllrrlleql 29 
                 ++++G++GtGK++l++ ++ ++
  EPX74576.1 164 ILLYGPPGTGKSYLAKAVATEA 185
                 799**************99876 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.012
      AAA_22  74 sseellealeqalraravielliiDEaqhlr.s 105
                 +se+l+++l + +r+++  +++ iDE++ l  s
  EPX74576.1 204 ESERLVRQLFEMAREQKP-SIIFIDEIDSLCgS 235
                 67899999999******9.**********9652 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0       2.6   1.5e+03      36      79 ..      42      73 ..      16     112 .. 0.53
   2 !   20.2   0.0   8.1e-07   0.00048       5      76 ..     164     232 ..     162     257 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 2.6
      AAA_14 36 inldderdkkladpekllelileklkeekktylflDEiqevpew 79
                ++l+ e+++k+++   +          ++k + +lD + +++ +
  EPX74576.1 42 MALKYEKNEKSKEI--I----------RGKVLEYLDRAEKLKVF 73
                33333333332221..1..........23333333333333333 PP

  == domain 2  score: 20.2 bits;  conditional E-value: 8.1e-07
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelileklkeekktylflDEiqev 76 
                 +++ G+  +GK++l+k ++ e     + ++ i+  d   k + ++e+l + ++e+++e+k +++f+DEi  +
  EPX74576.1 164 ILLYGPPGTGKSYLAKAVATEAG---STFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFIDEIDSL 232
                 6799***************9999...99999999999999888888999999998777799********865 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0   6.5e-07   0.00039       2      76 ..     164     231 ..     163     285 .. 0.84

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 6.5e-07
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------..G-SEEEEESGGG CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar..egeilvlDEver 76 
                 +lL GppGtgKs la+ +a   +++++       ++++dl+ ++    g+ ++    l + ar  +++i+++DE++ 
  EPX74576.1 164 ILLYGPPGTGKSYLAKAVATEAGSTFFS------ISSSDLVSKWM---GESERLVRQLFEMAReqKPSIIFIDEIDS 231
                 89****************9999999995......57899*****9...4444444555556666799********95 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.0     3e-07   0.00018      49     118 ..     163     230 ..     158     241 .. 0.69

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 3e-07
   IstB_IS21  49 nivllGpsGvGKshlaialgveavraglsvlfvrvedLveelkrar.rdgklaralkrllkvdllilDdlg 118
                 +i+l Gp+G+GKs+la a+++ea   g   + ++ +dLv++   +  r  +   +++r +k++++ +D++ 
  EPX74576.1 163 GILLYGPPGTGKSYLAKAVATEA---GSTFFSISSSDLVSKWMGESeRLVRQLFEMAREQKPSIIFIDEID 230
                 689***************99876...555555677888877544330333344445566667788888775 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.0   1.1e-06   0.00066      51     103 ..     162     212 ..     121     220 .. 0.84

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 1.1e-06
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  51 ravLlaGpsgtGktalaiaiskelgedvpfvalsgsevyslevkktevltqal 103
                  ++Ll Gp+gtGk+ la a++ e g    f ++s+s++ s  +  +e l+++l
  EPX74576.1 162 SGILLYGPPGTGKSYLAKAVATEAG--STFFSISSSDLVSKWMGESERLVRQL 212
                 58*********************99..5799*************999998764 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   1.8e-06    0.0011      23     115 ..     123     228 ..     105     249 .. 0.72

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 1.8e-06
      DUF815  23 devklddLvgidkqkealvent.......eqfle.glpannvLLwGarGtGKSslvkallneyaeeg..Lrlievekedlkelpklvellr...erper 108
                  +v+++d+ g+++ keal+e +       + f +  +p + +LL+G  GtGKS l ka+ +e+ ++   +   ++  + + e ++lv++l    ++++ 
  EPX74576.1 123 PNVRWEDIAGLENAKEALKETVllpiklpQLFSRsRKPWSGILLYGPPGTGKSYLAKAVATEAGSTFfsISSSDLVSKWMGESERLVRQLFemaREQKP 221
                 47899999999999999999873222222335442567899********************99998833333455566666777777766422144556 PP

      DUF815 109 filfvDD 115
                  i+f+D 
  EPX74576.1 222 SIIFIDE 228
                 7888876 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0   3.4e-06     0.002       2      40 ..     164     204 ..     164     252 .. 0.78

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 3.4e-06
      AAA_33   2 vllvGlpGsGKstlaerllkklg..avllssdtlrrrlfgt 40 
                 +ll G+pG+GKs+la+ ++ + g  ++ +ss +l ++  g+
  EPX74576.1 164 ILLYGPPGTGKSYLAKAVATEAGstFFSISSSDLVSKWMGE 204
                 6789*******************998889998855544442 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       8.3     5e+03      26      26 ..      76      76 ..      26     157 .. 0.64
   2 !   17.8   0.0   6.3e-06    0.0038       1      36 [.     164     202 ..     164     262 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 8.3
      AAA_18 26 v 26
                +
  EPX74576.1 76 Q 76
                2 PP

  == domain 2  score: 17.8 bits;  conditional E-value: 6.3e-06
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf...gvnlrdvakeng 36 
                 Ill G+pG+GK+ lak+++ + g+   ++ ++d++++ +
  EPX74576.1 164 ILLYGPPGTGKSYLAKAVATEAGStffSISSSDLVSKWM 202
                 99****************999877788666666666543 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   4.9e-06    0.0029       2      93 ..     160     245 ..     159     264 .. 0.73

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 4.9e-06
                 ----EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG---..----THHHHHHHHHTTT-HHHHTTS.EEEEETGGG-------------H CS
       AAA_2   2 piisilllgptgvGktelakalaellfvkkekkliradaselle..eeevehlvsrligappgyvgaeegG.ivllDEidKihpkessgadvSre 93 
                 p + ill gp g+Gk++laka+a        +++  +  s+l      e+e+lv +l        ++e++  i+++DEid  + ++s+g+  S+ 
  EPX74576.1 160 PWSGILLYGPPGTGKSYLAKAVATEAG----STFFSISSSDLVSkwMGESERLVRQLFE-----MAREQKPsIIFIDEIDSLCGSRSEGESESSR 245
                 567799******************999....4777777777777333466666666654.....34444434*********99985555554444 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   1.3e-05    0.0078       5      77 ..     164     232 ..     162     247 .. 0.65

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.3e-05
      AAA_24   5 iliyGpsgiGKTtlakelgpkplfidtekGlksldadkfpdieswedfldevvel...aaeladyktlviDtidel 77 
                 il+yGp+g+GK++lak          te+G+        + +++w    + +v      a +++ ++++iD id l
  EPX74576.1 164 ILLYGPPGTGKSYLAKAV-------ATEAGSTFFSISSSDLVSKWMGESERLVRQlfeMAREQKPSIIFIDEIDSL 232
                 89**************99.......556665555555555444333333333333444222233477777777766 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   2.1e-05     0.013       1      26 [.     164     189 ..     164     227 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 2.1e-05
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkkl 26 
                   i+lyGp+g+GKS+lak +a++  +++
    EPX74576.1 164 ILLYGPPGTGKSYLAKAVATEAGSTF 189
                   789**************999887666 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   0.0     4e-05     0.024       1      45 [.     167     214 ..     167     241 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 4e-05
                 EE-TTSSHHHHHHHHHHHHTEEEE..EHHHHHHHHHHTTT.SHSSHHH CS
      AAA_17   1 lGgPGsGKgtqceklvekygfthl..saGdllreeakrgg.lakarde 45 
                 +G+PG GK+ +++ ++ + g t++  s +dl+ + + +++ l+++  e
  EPX74576.1 167 YGPPGTGKSYLAKAVATEAGSTFFsiSSSDLVSKWMGESErLVRQLFE 214
                 7******************98886115688988877666523444444 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.1    0.0011      0.67      36      54 ..     164     182 ..     162     194 .. 0.86
   2 ?    3.0   0.0      0.11        67     128     165 ..     207     243 ..     197     269 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0011
      AAA_25  36 allaGapgtGKttlaldla 54 
                 +ll+G+pgtGK+ la  +a
  EPX74576.1 164 ILLYGPPGTGKSYLAKAVA 182
                 69************97766 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.11
      AAA_25 128 advdaleaaieevegvrlvviDplsralggdensnsdv 165
                 + v++l + ++e  ++  + iD +++++g  ++ +s+ 
  EPX74576.1 207 RLVRQLFEMARE-QKPSIIFIDEIDSLCGSRSEGESES 243
                 567888999999.78**************966665554 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.025        15      25      56 ..     152     182 ..     131     191 .. 0.78
   2 ?    6.2   0.0      0.01       6.1     105     143 ..     206     244 ..     198     288 .. 0.77

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.025
        TniB  25 eLleypkrkrmpnlllvGdsnnGKtmivekFa 56 
                 +L+++ ++   + +ll+G++ +GK+ +++  a
  EPX74576.1 152 QLFSRSRKPW-SGILLYGPPGTGKSYLAKAVA 182
                 5555444443.899************998765 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.01
        TniB 105 skleqqvlrllrelkvrvLiiDEihnllagsarkqrefl 143
                 ++l +q  ++ re k+ ++ iDEi++l   +++   e  
  EPX74576.1 206 ERLVRQLFEMAREQKPSIIFIDEIDSLCGSRSEGESESS 244
                 56778899999***************9855555444444 PP

>> Parvo_NS1  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00013     0.076     104     136 ..     151     183 ..     143     190 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00013
   Parvo_NS1 104 lawlskqlgkrntvwfyGpantGktnlaeaIak 136
                 ++ +s+   +   +++yGp+ tGk++la+a a+
  EPX74576.1 151 PQLFSRSRKPWSGILLYGPPGTGKSYLAKAVAT 183
                 66677777777889****************986 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.0    0.0013      0.79       3      24 ..     164     185 ..     162     191 .. 0.90
   2 ?    1.5   0.0       0.4   2.4e+02      55      99 ..     195     238 ..     187     256 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.0013
                 EEEEC-TTTCHHHHHHHHHHHH CS
       NACHT   3 vilqGeaGsGKTtLlqklalaw 24 
                 ++l G++G GK++L++ +a+++
  EPX74576.1 164 ILLYGPPGTGKSYLAKAVATEA 185
                 789***************9986 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.4
                 CHHHCCCCTS--SSS-CCHHHHCCSCCCEEEEEE-STT-SS-TCH CS
       NACHT  55 adllfsqlpepaapvsevwavllelperlLlilDglDelvtdlgq 99 
                  dl+ + + e+++ v++ +++  e++ ++ + +D +D l+   ++
  EPX74576.1 195 SDLVSKWMGESERLVRQLFEMAREQKPSIIF-IDEIDSLCGSRSE 238
                 5667777778888889977777777777666.6999999987777 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   0.00017       0.1      25      43 ..     164     182 ..     162     187 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00017
  Mg_chelatase  25 lllvGppGsGKtmlakrlp 43 
                   +ll+GppG+GK+ lak+++
    EPX74576.1 164 ILLYGPPGTGKSYLAKAVA 182
                   89*************9876 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.1       1.1   6.3e+02      46     102 ..      25      81 ..      12     119 .. 0.66
   2 ?    8.0   0.0    0.0042       2.5      17      43 ..     158     184 ..     153     193 .. 0.86
   3 ?    1.1   0.0      0.52   3.1e+02     110     134 ..     212     234 ..     185     254 .. 0.76

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 1.1
    ATPase_2  46 dkdkyviyyialreesiskldefieeeeekkklekalgiavpkaeleeilk.eksklv 102
                  +++   yy +  +++   l+   ++e++k+ ++ ++++ + +ae  +++  +ks +v
  EPX74576.1  25 RYGDAYKYYQNALDYFMMALKYE-KNEKSKEIIRGKVLEYLDRAEKLKVFLqQKSSQV 81 
                 44445556666666666666654.4666666677777777776666555554555444 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0042
    ATPase_2  17 repneiyfiYGpegsGKtaLlkeiien 43 
                 r+p++ +++YGp g GK+ L k ++++
  EPX74576.1 158 RKPWSGILLYGPPGTGKSYLAKAVATE 184
                 6788889**************998876 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.52
    ATPase_2 110 lekikkkgkkiiiiiDelqklidlg 134
                 l ++ +++k  ii+iDe+  l   g
  EPX74576.1 212 LFEMAREQKPSIIFIDEIDSLC--G 234
                 4456677777899999998877..4 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   0.00034      0.21      24      43 ..     166     185 ..     161     193 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00034
                 EE--TTSSTTHHHHHHHHHH CS
        PhoH  24 aiGpaGtGKtylavalavea 43 
                   Gp GtGK+yla a+a ea
  EPX74576.1 166 LYGPPGTGKSYLAKAVATEA 185
                 68**************9876 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   0.00088      0.53      23      45 ..     162     184 ..     148     293 .. 0.90
   2 ?   -2.1   0.0       4.5   2.7e+03      47      65 ..     296     314 ..     239     335 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00088
                      S-EEEECSTTSSHHHHHHHHHHH CS
  Sigma54_activat  23 lsvlitGesGtGKellaraihea 45 
                      + +l+ G  GtGK++la+a+ ++
       EPX74576.1 162 SGILLYGPPGTGKSYLAKAVATE 184
                      569***************98654 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 4.5
                      TTTTS-EEEEETTTS-TTC CS
  Sigma54_activat  47 krkekpfvavncaaipeel 65 
                      + +++++ ++n+++ip+el
       EPX74576.1 296 SYARSRMFELNIGDIPSEL 314
                      3445556666777776666 PP

>> BRO1  BRO1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.8   0.00027      0.16     256     318 ..       9      68 ..       6      82 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00027
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...........XXXXXXXXXXXXXXXX CS
        BRO1 256 kAlaqyrqalaaeeakkyGeeiarlqkAlellkealkskkaeelledlkglkdvveeklkeae 318
                 kA++   +a++ ++a++yG++ +++q+Al+++  alk +k+e+     + ++ +v e l +ae
  EPX74576.1   9 KAISLVKTAIDHDNAERYGDAYKYYQNALDYFMMALKYEKNEKS---KEIIRGKVLEYLDRAE 68 
                 7999999****************************876654433...3334445555555554 PP

>> Torsin  Torsin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00033       0.2      48      92 ..     155     203 ..     130     217 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00033
                 SS-SS-EE.EEEEE-TTSSHHHHHHHHHHH...HSTTGGGSTTEEEEEH CS
      Torsin  48 ekpkkpLv.lsfhGwtGtGknfvaeiiaen...lyrdGlrsdyvkkfva 92 
                  +++kp   + ++G +GtGk+++a+ +a +   ++ + + sd v k+++
  EPX74576.1 155 SRSRKPWSgILLYGPPGTGKSYLAKAVATEagsTFFSISSSDLVSKWMG 203
                 5677776437899*************98642337888888888888776 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0      0.02        12      22      38 ..     164     180 ..     159     189 .. 0.87
   2 ?    4.2   0.0     0.038        23     103     151 ..     204     255 ..     187     267 .. 0.73

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.02
      ATPase  22 vlitGepGtGKtifalq 38 
                 +l++G pGtGK+ +a+ 
  EPX74576.1 164 ILLYGPPGTGKSYLAKA 180
                 89**********99975 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.038
      ATPase 103 dleelieelaeaikeikakrvviDsitgl..ay.eekeavaReilrqlvrvl 151
                 + e l+++l e+ +e k + + iD i++l  ++ e +++  R+i  +++ ++
  EPX74576.1 204 ESERLVRQLFEMAREQKPSIIFIDEIDSLcgSRsEGESESSRRIKTEFLVQM 255
                 5688999********************9954220223334565555555555 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.0    0.0023       1.4      15      40 ..     159     185 ..     151     198 .. 0.79
   2 ?    0.7   0.0      0.44   2.6e+02      79     100 ..     204     225 ..     188     231 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0023
  Zeta_toxin  15 rPkl.illgGqpGAGKselaellkdel 40 
                 +P + ill G pG GKs+la+++++e 
  EPX74576.1 159 KPWSgILLYGPPGTGKSYLAKAVATEA 185
                 554427899**************9986 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.44
  Zeta_toxin  79 daselvekllqeaiengyniiv 100
                 ++ +lv++l++ a e++ +ii+
  EPX74576.1 204 ESERLVRQLFEMAREQKPSIIF 225
                 6789****************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (431 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       530  (0.029561); expected 358.6 (0.02)
Passed bias filter:                      471  (0.0262703); expected 358.6 (0.02)
Passed Vit filter:                        97  (0.00541023); expected 17.9 (0.001)
Passed Fwd filter:                        30  (0.00167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              30  [number of targets reported over threshold]
# CPU time: 0.60u 0.31s 00:00:00.90 Elapsed: 00:00:00.45
# Mc/sec: 2853.33
//
Query:       EPX74577.1  [L=408]
Description: protein phosphatase 2C Ptc3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-85  286.7   0.0    2.3e-85  286.3   0.0    1.2  1  PP2C      Protein phosphatase 2C
     0.0058   16.3   0.0      0.011   15.4   0.0    1.4  1  PP2C_2    Protein phosphatase 2C


Domain annotation for each model (and alignments):
>> PP2C  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  286.3   0.0   2.6e-89   2.3e-85       3     255 ..      24     272 ..      22     275 .. 0.97

  Alignments for each domain:
  == domain 1  score: 286.3 bits;  conditional E-value: 2.6e-89
                 EEEEEECCCCSSHHEEEECCCCTCTTCCCCCCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHCHTTHHHHHHHHHHHHHHHHHHHHHHHHHCHCCT-E CS
        PP2C   3 lgaselqgarksmedahislanlesssgkssvsffavfdghggseaakyarehleeilksqksfeelekleqalrksfladtdeelksskantepsksG 101
                 +g+s++qg+r smedah ++ +l++  ++++v ffav+dghgg+++ak+++e+l+ il+++++f+++ +  + l+ sfl+ +d+++  +++  + + sG
  EPX74577.1  24 YGLSSMQGWRISMEDAHSAKLSLKCPYENQEVDFFAVYDGHGGEKVAKWCGERLPSILEESEEFKKG-DFVNGLKASFLK-ADQMILEDEQF-HTDPSG 119
                 7899***************************************************************.9***********.99999997777.69**** PP

                 EEEEEEEEETTEEEEEEESS-EEEEEETTEEEEECS---STTSHHHHHHHHHTT--EEECCEEETTTBSBSB-EE-GGGTCCCC..CCSTSB---EEEE CS
        PP2C 102 stavvalirgtklyvAnvGDSravLcrkgnakkeltedHkpsdedEreRIeeaggsvsngegrvngsLavsRalGDlelkpket..eeqlvsaePdvts 198
                 +ta+v l  ++k+y+An+GDSr+vL+rkg ak +l++dHkps+e+E++RI +agg+v+  +grvng+La+sRa+GD+e+k+ +   e+q+v++ Pdv +
  EPX74577.1 120 CTATVLLRANNKIYCANAGDSRTVLGRKGVAK-ALSVDHKPSNESEKARICAAGGFVD--FGRVNGNLALSRAIGDFEFKNSNLepEKQIVTSLPDVIV 215
                 *******************************9.*************************..********************8555999************ PP

                 EEE-TTEEEEEEE-HHHHTTSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCCHH CS
        PP2C 199 vklteedefliLacdGlwdvlsdqeavdlvrdelekkkspeevaeelvdeaiargse 255
                 ++ t+edef++LacdG+wd+ ++q+++++vr+ + ++ s++e++e l+d++ia  +e
  EPX74577.1 216 HEVTDEDEFVVLACDGIWDCKTSQQVIEFVRRGIVAGLSLQEISESLMDNCIAGDTE 272
                 ************************************99**************98776 PP

>> PP2C_2  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   1.2e-06     0.011      23     190 ..      54     246 ..      47     264 .. 0.68

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.2e-06
      PP2C_2  23 ggsllaVaDGaGSakrSerGariaveavvealaell.eseeeeeeallraleaailadvlkeeaeaqdaelkdyatTllaavvtpdeivalqiGDGaiv 120
                 +++++aV DG+G  k        ++++ +e+l ++l esee ++ ++++ l+a++l++ +   +  ++   +  ++T  +++++ ++i +++ GD+   
  EPX74577.1  54 EVDFFAVYDGHGGEK--------VAKWCGERLPSILeESEEFKKGDFVNGLKASFLKADQMILE-DEQFHTDPSGCTATVLLRANNKIYCANAGDSRT- 142
                 556667777777555........46677777777774566677999********9965422222.12335666789999999****************. PP

      PP2C_2 121 vrdrdgevqllgepdsgeyanqttfltsedaeeel....................................rirrlkledgdalllmTDGlanslrdee 183
                 v +r+g  ++l+ +++    ++ + +++     ++                                     +++++ ++ + ++l+ DG+  + ++++
  EPX74577.1 143 VLGRKGVAKALSVDHKPSNESEKARICAAGGFVDFgrvngnlalsraigdfefknsnlepekqivtslpdvIVHEVT-DEDEFVVLACDGIW-DCKTSQ 239
                 569********999987777776666666444444566666677777777777777777777777777744444444.44566677777774.566666 PP

      PP2C_2 184 rfaelle 190
                 +++e+++
  EPX74577.1 240 QVIEFVR 246
                 6666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (408 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       416  (0.0232026); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2935.41
//
Query:       EPX74578.1  [L=149]
Description: SMN family protein Smn1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-06   27.6  13.0     0.0021   17.4  10.4    2.4  2  SMN              Survival motor neuron protein (SMN)
  ------ inclusion threshold ------
      0.058   13.4   2.6      0.069   13.1   2.6    1.1  1  AP-5_subunit_s1  AP-5 complex subunit sigma-1
      0.067   11.5   1.1      0.065   11.5   1.1    1.0  1  CDC45            CDC45-like protein


Domain annotation for each model (and alignments):
>> SMN  Survival motor neuron protein (SMN)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.6   1.7   8.3e-05      0.49       6      62 ..       5      67 ..       2      79 .. 0.59
   2 !   17.4  10.4   3.5e-07    0.0021     196     252 ..      93     148 ..      31     149 .] 0.77

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 8.3e-05
         SMN  6 sdiwddtalikaydkavasfkn..alkngdcae...paeke.ekrpgkkrknnkknrsrkkcn 62
                 ++wdd+ l  ay+ a+a +k+  +l ++ + +   p ++  ek+  +    +  + sr  +n
  EPX74578.1  5 KEVWDDSELRIAYETALAEYKKyhSLEAEKSQTqvqPRDETlEKQETTFVDHKDEDTSRAESN 67
                689******************844455444433101333331333333333334455566665 PP

  == domain 2  score: 17.4 bits;  conditional E-value: 3.5e-07
         SMN 196 flsgwppplp.agpplipppppmspdageddealgsmliawymsgyhtgyylglkqgr 252
                 f ++ pp       p ippppp+       de+   +l++wy +gy++g   g++q++
  EPX74578.1  93 FNTSIPPSANtEQLPTIPPPPPIQG--LTYDETYRRLLMSWYYAGYYAGLAQGMHQSQ 148
                 445566665414679*******976..5679******************999999985 PP

>> AP-5_subunit_s1  AP-5 complex subunit sigma-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   2.6   1.2e-05     0.069      15      97 ..      12      94 ..       5     105 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.2e-05
  AP-5_subunit_s1 15 esrvlysrvfg...aeekdeseeereeadeeerllrkeqiavvarqvksecalkrqasgrpvvedllsalseeeialaeaeeGvfr 97
                     e r++y ++     + ++ e+e+++++ + ++++l k++ ++v+++ ++    +r++s+++v+e+ +  + e     +eae+Gvf 
       EPX74578.1 12 ELRIAYETALAeykKYHSLEAEKSQTQVQPRDETLEKQETTFVDHKDED---TSRAESNTDVAEEGQIVKDEKDHSPQEAENGVFN 94
                     567777776543314477788889999999999999999***9987665...57788899999*999999999999********96 PP

>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   1.1   1.1e-05     0.065     106     177 ..       7      83 ..       2     137 .. 0.53

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 1.1e-05
       CDC45 106 vfDDgdieeelee...ereayealeeeeesdeede...eeeeeddddee..eeeeeeedeedeeedeeeskkkrksksde 177
                 v+DD ++    e+   e ++y++le e+ ++   +   ++e  +++++   ++++e++++ ++++d  e+++  k+++d+
  EPX74578.1   7 VWDDSELRIAYETalaEYKKYHSLEAEKSQT---QvqpRDETLEKQETTfvDHKDEDTSRAESNTDVAEEGQIVKDEKDH 83 
                 9****96333333111444566665555554...2222222222221110022222222222222222222222222221 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1285  (0.0716716); expected 358.6 (0.02)
Passed bias filter:                      500  (0.0278878); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.29s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 991.74
//
Query:       EPX74579.1  [L=781]
Description: DUF221 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-82  276.4  20.6    2.3e-82  276.4  20.6    1.8  2  RSN1_7TM  Calcium-dependent channel, 7TM region, putative pho
    7.1e-36  124.1   0.0    1.1e-35  123.4   0.0    1.3  1  PHM7_cyt  Cytosolic domain of 10TM putative phosphate transpo
    2.6e-30  105.2   3.3    2.6e-30  105.2   3.3    3.5  5  RSN1_TM   Late exocytosis, associated with Golgi transport
     0.0035   17.2   0.0     0.0074   16.1   0.0    1.5  1  DUF746    Domain of Unknown Function (DUF746)
     0.0054   16.5   0.0        4.3    7.2   0.0    2.4  2  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom


Domain annotation for each model (and alignments):
>> RSN1_7TM  Calcium-dependent channel, 7TM region, putative phosphate
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.9   3.4         5   1.8e+04     221     242 ..     188     209 ..     187     215 .. 0.60
   2 !  276.4  20.6   6.4e-86   2.3e-82       1     274 []     434     703 ..     434     703 .. 0.98

  Alignments for each domain:
  == domain 1  score: -5.9 bits;  conditional E-value: 5
    RSN1_7TM 221 faliyfllgylvykyqllyvyd 242
                 f  +y ++ y++  y l+  + 
  EPX74579.1 188 FLYLYVIFTYVISIYLLYVLFS 209
                 4556666666666666655554 PP

  == domain 2  score: 276.4 bits;  conditional E-value: 6.4e-86
    RSN1_7TM   1 rklivtlllvlliifwiipvafvgllsnletltkvlpflkkilelskkllsvvtgllPtlllslllallpiilrllsklqGalsrselelsvvskyfaF 99 
                 r++++tll++++i++w++pv +++++ nl++++k++p l+ +++  + l s+++++lPtl++sl++++ p+++++lsk+qG+ sr+e+e++ v k+fa+
  EPX74579.1 434 RSWLITLLTLMIILLWTVPVGAIAVFINLDNISKLWPELGRLIQDVPFLNSLLRTFLPTLVYSLFISISPYLFQWLSKMQGFNSRGEEEIYSVGKNFAY 532
                 7899*********************************************************************************************** PP

    RSN1_7TM 100 lvvnvFlvftlagtalslleeiidnptsipkllaeslpkasnFfityillqglagaaleLlqlvklilflikrkflsktprdlaerytkppsfdygtey 198
                 l+vn Flv+++ag+ + +  e+++++t+ +++la+ lp++++Ffi++i+lqg+++++l+L+ql+kl +++i+r+f+ +  +d++e+  kp+sf+ g+++
  EPX74579.1 533 LFVNFFLVYIIAGSTSYW--ELVKDTTTLAHFLANRLPNQAQFFIDLIVLQGIGMFPLKLIQLGKLSMYIIRRSFA-NHSQDYRELE-KPDSFSIGIYL 627
                 *************98776..77777************************************************999.7899999988.*********** PP

    RSN1_7TM 199 pkvllifvialiYsviaPlilpfaliyfllgylvykyqllyvydtkyesgGklwpralnrllvglvlfqllliglf 274
                 p+ ++i++i+l+Ys+i+Plil+f+liyf++g+lvyky+l+y+++++++s+Gklw +++ r+++g++l+ql+++gl+
  EPX74579.1 628 PQPMFILMICLCYSIISPLILIFGLIYFIVGFLVYKYKLIYQMEHPQHSTGKLWGIIFERIIFGCLLLQLTMMGLM 703
                 **************************************************************************96 PP

>> PHM7_cyt  Cytosolic domain of 10TM putative phosphate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.4   0.0   3.1e-39   1.1e-35       1     175 [.     230     422 ..     230     423 .. 0.93

  Alignments for each domain:
  == domain 1  score: 123.4 bits;  conditional E-value: 3.1e-39
    PHM7_cyt   1 srTvlvtgiPkelrseeklkeffeelypgkvvesvqivrdvkkldklveerekavrkleaalskykkngkklpkkr....................... 76 
                 +rTv++tg+P++l+s+e+lk+++e+l +g+v  +v+i+r+++ +d+l  +r+ ++++le++++ y+kn   l++ +                       
  EPX74579.1 230 DRTVFITGLPPDLCSSEALKSYLEKLDIGDV-AKVNICRNYTVIDSLLSKRKAYAQNLEKYWHAYEKNSL-LHGFQipsipdtlvsgsvpytetsqyll 326
                 7*****************************8.9**********************************975.4466699********************* PP

    PHM7_cyt  77 ..........pthklgflglkligkkvdaidyyrekleeldeeieeerekvkkkplgaaFvtfesersaaavakqakcaaqiqqssnptlkpkkwtvel 165
                           p+ +++f+g  l+g+++daid+y++kl ++d++ie +r+  +  ++g aFvtfes  sa+ va     +++i ++s      ++++++l
  EPX74579.1 327 slprgelecrPMVRTHFFG--LVGQQIDAIDFYSAKLLSVDRKIESARR-LNHPATGEAFVTFESMASAQIVA-----QIHIDAKS-----LMGLHISL 412
                 ******************9..89*************************9.77899**************9995.....33333322.....379***** PP

    PHM7_cyt 166 APePrDviWe 175
                 AP+ +D+ W+
  EPX74579.1 413 APASNDIQWH 422
                 *********7 PP

>> RSN1_TM  Late exocytosis, associated with Golgi transport
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.2   3.3   7.4e-34   2.6e-30       2     155 ..      19     209 ..      18     210 .. 0.87
   2 ?   -3.3   0.5       1.8   6.5e+03     139     153 ..     432     446 ..     419     454 .. 0.60
   3 ?   -0.5   0.3      0.26   9.3e+02      84     151 ..     484     549 ..     479     552 .. 0.56
   4 ?   -3.0   0.9       1.6   5.6e+03      91     103 ..     634     646 ..     630     676 .. 0.62
   5 ?   -2.8   0.0       1.3   4.7e+03      11      38 ..     718     750 ..     697     764 .. 0.56

  Alignments for each domain:
  == domain 1  score: 105.2 bits;  conditional E-value: 7.4e-34
     RSN1_TM   2 lltslvinlvlalvflllFlilRkknkrvYaprtylkgeeertpplpqkglfgWipallkisdeeilekaGLDayvflrflkmlikiflvlavlalivL 100
                 l t+++++++++  ++l+F+i+R++++ +Yapr      +e + p  +++ + W+++l++i+d    ++aGLD+yvfl f+km+ik++++ ++l+++v+
  EPX74579.1  19 LKTQFWLAFLVGSSACLFFCIFRRRWNVLYAPRVSI---QELKLPTLSSSSYLWLVDLIRIPDYVFQNCAGLDGYVFLLFFKMAIKFLAFTSLLGFTVI 114
                 569******************************998...4566666669999*********************************************** PP

     RSN1_TM 101 lPvn..........atggegedskesk...........sgldklsisnvs...egsn..........................rlwahvvvayiftglv 149
                 +Pvn          +          +            ++l+ ls+ nv+   ++++                          +l+++v+++y+++++ 
  EPX74579.1 115 MPVNkhfrgdafgnI----------TLsgvftsspssfHSLTSLSPPNVQsplTNQDsislkqttntfsnltdipglpgpgdgFLYLYVIFTYVISIYL 203
                 ****55544443332..........22344555666688999999999987765555899999999********************************* PP

     RSN1_TM 150 lyllyr 155
                 ly+l++
  EPX74579.1 204 LYVLFS 209
                 ***985 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.8
     RSN1_TM 139 vvvayiftglvlyll 153
                 ++ ++++t+l+l+++
  EPX74579.1 432 FFRSWLITLLTLMII 446
                 444444444444333 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.26
     RSN1_TM  84 mlikiflvlavlalivLlPvnatggegedskesksgldklsisnvsegsnrlwahvvvayiftglvly 151
                  l++ fl+ +v++l++ +  +  +  ++ + +  ++  +  i  v ++  +l++ ++++yi+ g + y
  EPX74579.1 484 SLLRTFLPTLVYSLFISISPYLFQWLSKMQGF--NSRGEEEIYSVGKNFAYLFVNFFLVYIIAGSTSY 549
                 55566666666665555544444333332222..1122334555667777888888888888887765 PP

  == domain 4  score: -3.0 bits;  conditional E-value: 1.6
     RSN1_TM  91 vlavlalivLlPv 103
                 ++++l+  +++P+
  EPX74579.1 634 LMICLCYSIISPL 646
                 3333333333332 PP

  == domain 5  score: -2.8 bits;  conditional E-value: 1.3
     RSN1_TM  11 vlalvflllFlilRkk.....nkrvYaprtylk 38 
                 +l++++ +++ + +       + ++Y+ r  ++
  EPX74579.1 718 LLCFTLTSAYNFSKMIqpameFVSLYYVRMSQS 750
                 444444444444443333344566677776654 PP

>> DUF746  Domain of Unknown Function (DUF746)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   2.1e-06    0.0074       8      42 ..     405     439 ..     404     440 .. 0.93

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 2.1e-06
      DUF746   8 lLsqplslaeaadllgtdegiiakwvreFrewllq 42 
                 l+++ +sla a++ +   +  i +w+r Fr+wl  
  EPX74579.1 405 LMGLHISLAPASNDIQWHHTYIGRWHRFFRSWLIT 439
                 6799****************************976 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.0    0.0017       6.2       1      33 [.     233     268 ..     233     276 .. 0.90
   2 !    7.2   0.0    0.0012       4.3      26      53 ..     369     393 ..     366     402 .. 0.80

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0017
                 EEEESETTT.SSHHHHHHHHHT..TSCEEEEEEEEE CS
       RRM_1   1 lfVgnLppd.vteeeLkelFsk..fGpiksiklvrd 33 
                 +f+++Lppd ++ e Lk +++k  +G++ +++++r+
  EPX74579.1 233 VFITGLPPDlCSSEALKSYLEKldIGDVAKVNICRN 268
                 8*****77758***********999********997 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0012
                 EEEEEEEETTTSEEEEEEEEESSHHHHH CS
       RRM_1  26 ksiklvrdetgkskgfafVeFeskedAe 53 
                 +s++  +   ++++g afV+Fes  +A+
  EPX74579.1 369 ESARRLN---HPATGEAFVTFESMASAQ 393
                 4555555...5999**********9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (781 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       815  (0.0454571); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.68u 0.26s 00:00:00.94 Elapsed: 00:00:00.44
# Mc/sec: 5337.40
//
Query:       EPX74580.1  [L=399]
Description: URM1 activating enzyme [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      3e-57  193.8   0.0    1.2e-56  191.9   0.0    1.7  2  ThiF            ThiF family
    0.00025   21.5   0.0     0.0022   18.5   0.0    2.6  3  Rhodanese       Rhodanese-like domain
     0.0012   18.6   0.0     0.0087   15.8   0.0    1.9  2  ELFV_dehydrog   Glutamate/Leucine/Phenylalanine/Valine dehydr
  ------ inclusion threshold ------
      0.023   15.1   0.0        1.1    9.7   0.0    2.3  2  Semialdhyde_dh  Semialdehyde dehydrogenase, NAD binding domai
       0.18   11.2   0.9         27    4.2   0.1    3.0  3  Vps36-NZF-N     Vacuolar protein sorting 36 NZF-N zinc-finger
       0.25   11.4   0.2        5.6    7.0   0.1    2.6  3  Shikimate_DH    Shikimate / quinate 5-dehydrogenase


Domain annotation for each model (and alignments):
>> ThiF  ThiF family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  191.9   0.0   3.9e-60   1.2e-56       2     242 ..      23     259 ..      22     262 .. 0.90
   2 ?   -1.1   0.0      0.33   9.9e+02      74      92 ..     362     380 ..     360     389 .. 0.85

  Alignments for each domain:
  == domain 1  score: 191.9 bits;  conditional E-value: 3.9e-60
                 HHHHHH..HHHHHHHHHHTSEEEEE--SHHHHHHHHHHHHHTTTEEEEEESSB--GGGGGTBTTS-GGGTTSBHHHHHHHHHHHT-TTSEEEEEES-CC CS
                 xxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        ThiF   2 srqlal..lgedgqekLrdskvllvGaGglGsellknLalsGvgkltlvDnDkielsNlnRqflfreediGkpKaevaaealqeinpdveveavterit 98 
                  rq+ +  +g  gq +L++s+vl++G+GglG+++++++ ++G+g + l D D++++ Nl+Rq+l+++++ G++Kae+a++ lq++np++++ +++e  +
  EPX74580.1  23 GRQMIMpeIGLPGQLALKNSSVLIIGVGGLGCPAAQYITAAGIGTIGLLDGDVVDKNNLHRQVLHSTSKEGMSKAESAKQYLQDLNPNANILTYVEYAS 121
                 578766778999*************************************************************************************** PP

                 GCCS-HHHHTT-SEEEEESSSHHHHHHHHHHHHHHT-EEEEEEEETTEEEEEEEEECCS-ECTSS-TGGS.EECCCCEEHHHHHHCTE-B-HHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        ThiF  99 detvleellesvDlVvdalDniearrlvnracvkkgiplieagtlgfegqvvviipgktgcyeCldpsstedptekkvplctsiagnipaiatttavva 197
                 ++++  e+++ +D+V+d++Dn  +r+l+ ++cv +g+pli+a++l+fegq+ v+++ + +cy+C++p     ++   v +c s  g   +++++++ ++
  EPX74580.1 122 PQNLF-EIISAYDIVLDCTDNQFTRYLISDVCVWHGKPLISASALQFEGQLCVYNYRNGPCYRCMFP-----NPTPVVTSC-SKSG---ILGPVVGTMG 210
                 *9955.9***********************************************99**********8.....555557788.7788...9********* PP

                 HHHHHHHHHHH.....TTBCGGGCCEEEECCTTTTEEEEECCEEEEEEC- CS
                 xxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        ThiF 198 glaalellkll.....sgkeklenslltqvdllesrfenvelerakkskc 242
                  ++ale++kl       +ke+  +++l +  +  ++++++++++ ++++c
  EPX74580.1 211 TMQALETIKLAlhmkgINKEPFVPFILLFHTFRFPQWKHIRIRS-RQQSC 259
                 **********9999886666678877765555556888888855.43444 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.33
                 HHHHHHHHHHT-TTSEEEE CS
                 xxxxxxxxxxxxxxxxxxx RF
        ThiF  74 aevaaealqeinpdvevea 92 
                 +++a + lqe+np++e+  
  EPX74580.1 362 SQSAVRTLQELNPGAEIFD 380
                 67899*********99965 PP

>> Rhodanese  Rhodanese-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       1.7     5e+03      65     100 ..      40      74 ..      28      77 .. 0.72
   2 ?   -3.1   0.0       3.9   1.2e+04      52      72 ..      97     116 ..      83     128 .. 0.57
   3 !   18.5   0.0   7.3e-07    0.0022       1     106 [.     301     390 ..     301     391 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 1.7
   Rhodanese  65 nkktvvvycdgggraaaaaallkklGyknvsvldGG 100
                 +++ v +++ gg +  aa+++   +G  ++ +ldG 
  EPX74580.1  40 KNSSVLIIGVGGLGCPAAQYITA-AGIGTIGLLDGD 74 
                 46778888888888555555555.897779999986 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 3.9
   Rhodanese  52 lelpeellelgidnkktvvvy 72 
                 +e  +++l+ +++++  + +y
  EPX74580.1  97 AESAKQYLQ-DLNPNANILTY 116
                 333333333.35566666655 PP

  == domain 3  score: 18.5 bits;  conditional E-value: 7.3e-07
   Rhodanese   1 sakelkell.ekgkvallDvRppeeYekghIpgAvnvskdtlsrakkseapllelpeellelgidnkktvvvycdgggraaaaaallkk..lGyknvsv 96 
                 ++ el++l+ e++++ +lDvR+p++Y  + +p   nv                 l e ++    d   +v v+c++g+ +++a ++l++   G  +++ 
  EPX74580.1 301 TPRELANLIrESPSMTFLDVREPVQYGICNLPSFKNV----------------PLSEVYSMN--DLSGKVCVICRSGNTSQSAVRTLQElnPG-AEIFD 380
                 5789999998899888**********88999999999................334444444..44778**************9999974466.78*** PP

   Rhodanese  97 ldGGfkawke 106
                 +  G+++w++
  EPX74580.1 381 VISGLQGWSK 390
                 ********87 PP

>> ELFV_dehydrog  Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   2.9e-06    0.0087      29     120 ..      38     138 ..      10     145 .. 0.71
   2 ?    0.3   0.0      0.15   4.6e+02      26      55 ..     344     373 ..     338     382 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 2.9e-06
                    -STTEEEEEE--SHHHHHHHHHHHHCT-EEEEEEESSEEEEETTEE-HHHHHHHHHCSSSSTTHSHH...........STSTSEEESHHSHHHHS. CS
  ELFV_dehydrog  29 slegkrvaisGsGnvgsyaallltelgakvvavsDssGviydpeGldieellelkeerksvkeykks...........sekkaeyieneeellel. 112
                     l++++v i G G +g  aa+ +t +g  ++++ D  G ++d++ l+++ l +  +e +s +e++k+             + +ey + + +l+e+ 
     EPX74580.1  38 ALKNSSVLIIGVGGLGCPAAQYITAAGIGTIGLLD--GDVVDKNNLHRQVLHSTSKEGMSKAESAKQylqdlnpnaniL-TYVEYASPQ-NLFEIi 129
                    68999****************************99..569*****************9997777755444444433211.122233322.334434 PP

                    .S-SEEEE- CS
  ELFV_dehydrog 113 .kvdilvPc 120
                      +di++ c
     EPX74580.1 130 sAYDIVLDC 138
                    566666666 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.15
                    TTS-STTEEEEEE--SHHHHHHHHHHHHCT CS
  ELFV_dehydrog  26 kldslegkrvaisGsGnvgsyaallltelg 55 
                    ++++l+gk ++i  sGn  + a++ l+el+
     EPX74580.1 344 SMNDLSGKVCVICRSGNTSQSAVRTLQELN 373
                    567899********************9986 PP

>> Semialdhyde_dh  Semialdehyde dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   0.00037       1.1      31      98 ..      94     164 ..      78     170 .. 0.75
   2 ?    2.9   0.0     0.046   1.4e+02       1      32 [.     351     383 ..     351     391 .. 0.89

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00037
                     EESTTTTTSBHHHHSG...GGTTTECEBEEE..GGGGGCTT-SEEEE-SCHHHHHHHHHHH.HHTTSEEEESSS CS
  Semialdhyde_dh  31 lsssrsaGkklaeavk...aleegkdlkved..vdeeelkevdivflalpagvskelapkl.aeagvkviDlss 98 
                     +s+++sa + l+++++   +    + +++ +     e++++ div+ +++++ ++ l  ++ + +g  +i++s+
      EPX74580.1  94 MSKAESAKQYLQDLNPnanI---LTYVEYASpqNLFEIISAYDIVLDCTDNQFTRYLISDVcVWHGKPLISASA 164
                     45666788888888885533...4444444431245666****************9999987999999999987 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.046
                     EEEEETTTSHHHHHHHHHHHC.TSSEEEEEEEE CS
  Semialdhyde_dh   1 kvaivGatGyvGqellrlLee.hpevelvvlls 32 
                     kv ++  +G++ q  +r L+e +p +e+  ++s
      EPX74580.1 351 KVCVICRSGNTSQSAVRTLQElNPGAEIFDVIS 383
                     6899999****************9999987765 PP

>> Vps36-NZF-N  Vacuolar protein sorting 36 NZF-N zinc-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.1    0.0092        27      12      27 ..     181     196 ..     178     230 .. 0.79
   2 ?   -1.1   0.0      0.42   1.2e+03      35      40 ..     258     263 ..     249     281 .. 0.73
   3 ?    3.8   0.0     0.012        37      11      26 ..     352     367 ..     348     375 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.0092
  Vps36-NZF-N  12 CpICsfsNevpsnfdp 27 
                  C+ C+f N++p  ++ 
   EPX74580.1 181 CYRCMFPNPTPVVTSC 196
                  999*******987665 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.42
  Vps36-NZF-N  35 pClaCG 40 
                   C aCG
   EPX74580.1 258 SCAACG 263
                  799**9 PP

  == domain 3  score: 3.8 bits;  conditional E-value: 0.012
  Vps36-NZF-N  11 vCpICsfsNevpsnfd 26 
                  vC IC   N+ +s + 
   EPX74580.1 352 VCVICRSGNTSQSAVR 367
                  8********9998765 PP

>> Shikimate_DH  Shikimate / quinate 5-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.1    0.0019       5.6      10      42 ..      39      71 ..      33     108 .. 0.79
   2 ?    1.3   0.0      0.11   3.4e+02      61      86 ..     117     142 ..     105     151 .. 0.85
   3 ?   -2.7   0.0         2   5.8e+03       9      33 ..     347     371 ..     340     381 .. 0.67

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0019
                  .TT-EEEEES-SHHHHHHHHHHHCCT-CEEEEE CS
  Shikimate_DH 10 lkekkvlliGaGemaelvakhLlakgvkkvvva 42
                  lk++ vl+iG G ++  +a+++ a+g+  +  +
    EPX74580.1 39 LKNSSVLIIGVGGLGCPAAQYITAAGIGTIGLL 71
                  8899********************999877655 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.11
                   -EEEEGCGHHHHHHT-SEEEE-SSSS CS
  Shikimate_DH  61 iealkleelkellaeadvvisatase 86 
                   +e+ + ++l e+++++d+v+ +t  +
    EPX74580.1 117 VEYASPQNLFEIISAYDIVLDCTDNQ 142
                   567778999***********999765 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 2
                   ..TT-EEEEES-SHHHHHHHHHHHC CS
  Shikimate_DH   9 slkekkvlliGaGemaelvakhLla 33 
                   +l++k  ++   G++++ +++ L +
    EPX74580.1 347 DLSGKVCVICRSGNTSQSAVRTLQE 371
                   5555555555677777777777764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (399 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       553  (0.0308439); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 2813.23
//
Query:       EPX74581.1  [L=717]
Description: ATP-dependent RNA helicase Prh1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.8e-21   74.6   0.1    6.8e-21   74.6   0.1    1.9  2  HA2          Helicase associated domain (HA2)
    1.4e-13   51.0   0.1    4.9e-13   49.3   0.1    2.0  1  OB_NTP_bind  Oligonucleotide/oligosaccharide-binding (OB)-fol
      2e-13   50.6   0.0    8.7e-13   48.6   0.0    2.1  1  Helicase_C   Helicase conserved C-terminal domain
    1.3e-07   31.6   0.1    3.4e-07   30.2   0.1    1.8  1  DEAD         DEAD/DEAH box helicase
    2.3e-06   27.9   0.0      1e-05   25.9   0.0    2.2  1  AAA_22       AAA domain
    0.00038   21.0   0.1     0.0088   16.6   0.1    2.6  1  ABC_tran     ABC transporter
    0.00077   19.5   0.2       0.43   10.6   0.0    2.7  2  ResIII       Type III restriction enzyme, res subunit
     0.0026   16.8   0.0     0.0053   15.8   0.0    1.5  1  T2SSE        Type II/IV secretion system protein
      0.006   16.0   0.0      0.036   13.4   0.0    2.2  2  ATPase       KaiC
     0.0077   16.3   0.0       0.11   12.6   0.0    2.7  1  AAA_14       AAA domain
     0.0079   15.9   0.0      0.014   15.1   0.0    1.4  1  AAA_30       AAA domain
     0.0083   16.5   0.0      0.018   15.4   0.0    1.5  1  AAA_19       AAA domain
  ------ inclusion threshold ------
       0.03   14.1   0.0      0.069   12.9   0.0    1.6  1  AAA_29       P-loop containing region of AAA domain
      0.032   13.7   0.1      0.094   12.2   0.0    1.8  2  AAA_7        P-loop containing dynein motor region
      0.051   12.8   0.0      0.098   11.9   0.0    1.4  1  DUF2075      Uncharacterized conserved protein (DUF2075)
      0.052   13.5   0.0       0.12   12.3   0.0    1.6  1  RsgA_GTPase  RsgA GTPase
       0.11   11.8   0.0       0.21   10.8   0.0    1.4  1  Zeta_toxin   Zeta toxin
       0.11   12.6   0.0        0.3   11.2   0.0    1.8  1  AAA_33       AAA domain
       0.12   12.7   0.0       0.36   11.2   0.0    1.8  1  AAA_16       AAA ATPase domain
       0.65   10.5  12.6       0.26   11.8   0.5    2.8  2  AAA_23       AAA domain


Domain annotation for each model (and alignments):
>> HA2  Helicase associated domain (HA2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.5       9.3   8.3e+03      66      66 ..      56      56 ..      17      93 .. 0.53
   2 !   74.6   0.1   7.5e-24   6.8e-21       1     107 [.     485     572 ..     485     577 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 9.3
         HA2 66 e 66
                +
  EPX74581.1 56 N 56
                1 PP

  == domain 2  score: 74.6 bits;  conditional E-value: 7.5e-24
         HA2   1 AlelLvalgALdeegnlTelGrkmaelPlsprlakmLlaaaeleegcldevitivAalsveeifleeneeekeeeeeeeekakkkrkeeekarrklahk 99 
                 Ale+L+++gAL+++g++ elG +m+ +Pl p+la+ +l a  +e++cl+evi+iv++ls++++fl ++e++               +e+++a+ k++h+
  EPX74581.1 485 ALEHLYSIGALSDNGKINELGYQMSLIPLLPSLARAMLSA--REHNCLNEVIDIVSCLSTDSMFLFPQEKR---------------EEAAEAKTKFLHS 566
                 89**************************************..777********************999643...............4444445667777 PP

         HA2 100 daegDhlt 107
                 +  gDhlt
  EPX74581.1 567 E--GDHLT 572
                 7..99998 PP

>> OB_NTP_bind  Oligonucleotide/oligosaccharide-binding (OB)-fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.3   0.1   5.4e-16   4.9e-13       3      83 .]     636     711 ..     634     711 .. 0.93

  Alignments for each domain:
  == domain 1  score: 49.3 bits;  conditional E-value: 5.4e-16
                  HHHHHHHTTCEEEEEETTCCEEETTTCEEEEE-TTSTTTTT...TSSSEEEEEEEEESSSEEEEEEEEE-HHHHHHHSTTT CS
  OB_NTP_bind   3 aillaGlypqiarkdpskkdyktartktrvfihpsSvlaknekekepewvvytelvettklylrdltaidpawLllfagqi 83 
                  ++ l+G+++  a   p ++ ykt+ +++ v+ihpsS l+     k+ e ++y+e+v ttk+y+r+++ i++ wL  +a+++
   EPX74581.1 636 RSFLSGYISSTALLHPDGS-YKTTVGNQIVSIHPSSSLFG----KKAEAIMYHESVFTTKPYVRGVSSIRSTWLSAVAPHY 711
                  6789999999999999998.999989*************8....********************************99986 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.6   0.0   9.7e-16   8.7e-13       9     109 ..     296     422 ..     285     424 .. 0.81

  Alignments for each domain:
  == domain 1  score: 48.6 bits;  conditional E-value: 9.7e-16
                 HHHHTTTTSEEEEEESSHHHHHH........HHHHHHHT.....TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSS CS
  Helicase_C   9 llkleeeggkilifvntidrlek........vklllekk.....gikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlp 94 
                 l + +   g++l+f++ +d++e         +k           +i++++l ++lpq+++  +++    ++++++++t++ae++++i ++++Vi+ +l 
  EPX74581.1 296 L-HVKLPPGDMLVFLTGQDEIEAleslikdyAKQ----LpsnklQIQACPLFASLPQEQQMLVFQPTLPNHRKIVLSTNIAETSVTISGIRYVIDTGLA 389
                 3.5678999**********997753343333333....1334479****************************************************** PP

                 ....SSH..............HHHHHHHTTSSS CS
  Helicase_C  95 ....rnv..............tsyiqriGRtgR 109
                     +n               + + qr+GR+gR
  EPX74581.1 390 kvkqFNArlglesltvqpisqSAARQRSGRAGR 422
                 665533277888889999999***********9 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   0.1   3.8e-10   3.4e-07       6     171 ..     102     252 ..      97     257 .. 0.72

  Alignments for each domain:
  == domain 1  score: 30.2 bits;  conditional E-value: 3.8e-10
                 HHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCSEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   6 eaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvdivvgt 104
                 ++++ i +++ +++ +eTGsGK++     + ++ y     ++  + i  P r  a + ++++ +  ++   r+   +g  + r + s+   +++  + t
  EPX74581.1 102 AICQKIQDNRVIVIVGETGSGKSTQIPQFLNECEYA----KEGCVGITQPRRVAAVNLAKRVAQEQNT---RLGDKVG-YSIRFDDSTS-PNTRAKYLT 191
                 566778899999***********9866666655553....44467799**************999995...4433333.4444444444.457778899 PP

                 HHHHHH.HHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTST.TTSEEEEEESSBS.H CS
                 xxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxx.x RF
        DEAD 105 pgrldd.llstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgk.lqrqvivlSATlp.k 171
                  g+l++ l+++    lsq  +l+lDEa++   +   d +   ++++    ++ + l   viv+SATl+ +
  EPX74581.1 192 DGMLLReLINDPL--LSQYHTLILDEAHERTLM--TDMLLGFVKKI---IKKRPaLR--VIVMSATLNaE 252
                 9**9996668888..*************97776..44444444444...23334344..********955 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9   0.0   1.1e-08     1e-05       4     102 ..     109     218 ..     105     251 .. 0.73

  Alignments for each domain:
  == domain 1  score: 25.9 bits;  conditional E-value: 1.1e-08
      AAA_22   4 tagilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelka...................erlsseelleale 83 
                 + +++v++Ge+G+GK+t + ++l++ + +     ++ ++v +t p      +l+++++++ + +l +                   +  +   l+e+++
  EPX74581.1 109 DNRVIVIVGETGSGKSTQIPQFLNECE-Y-----AKEGCVGITQPRRVAAVNLAKRVAQEQNTRLGDkvgysirfddstspntrakYLTDGMLLRELIN 201
                 6789********************973.3.....355555555555555555555555555555555555566669999*999995555555555**** PP

      AAA_22  84 qalraravielliiDEaqh 102
                 + l +++    li+DEa+ 
  EPX74581.1 202 DPLLSQYH--TLILDEAHE 218
                 ******99..********7 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.1   9.8e-06    0.0088       7      42 ..     106     142 ..     101     218 .. 0.74

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 9.8e-06
                 EEETTSEEEEEESTTSSHHHHHHHHTTSS--.SEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxx RF
    ABC_tran   7 klkegekvaivGenGaGKStLlkllagllkp.teGei 42 
                 k++ +++++ivGe+G+GKSt +  ++++ +  +eG +
  EPX74581.1 106 KIQDNRVIVIVGETGSGKSTQIPQFLNECEYaKEGCV 142
                 788999**************88766665554377776 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0      0.01       9.2       9      39 ..      97     125 ..      84     139 .. 0.84
   2 !   10.6   0.0   0.00048      0.43     126     170 ..     201     250 ..     161     251 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.01
                 HHHHHHHT......TTSEEEEEESTTSTHHH CS
      ResIII   9 eeaienlleklkskrdkrglikmaTGtGKTl 39 
                 +ea +++ +k++  +++ ++i+ +TG+GK+ 
  EPX74581.1  97 WEAKDAICQKIQ--DNRVIVIVGETGSGKST 125
                 678888999995..888888*********86 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00048
                 .HHHTTT-SEEEEETGGGTTS.T.....TTHHHHHT---SEEEEEESS-S CS
      ResIII 126 eellrdrfdviiiDEaHrlgakk.....swreilekfkeavllglTATpe 170
                 ++ l +++  +i DEaH  + ++     ++++i++k ++  ++ ++AT++
  EPX74581.1 201 NDPLLSQYHTLILDEAHERTLMTdmllgFVKKIIKKRPALRVIVMSATLN 250
                 45566677899*******99995566769999****************86 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   5.9e-06    0.0053     118     166 ..      99     147 ..      64     178 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 5.9e-06
       T2SSE 118 iaevlrkavrerglilvsGgTgsGKttllyallkeinksderivtvEDp 166
                  ++++ + ++ + +i++ G TgsGK+t +   l+e +  +e  v +  p
  EPX74581.1  99 AKDAICQKIQDNRVIVIVGETGSGKSTQIPQFLNECEYAKEGCVGITQP 147
                 578899999********************99999998887766666555 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.0     4e-05     0.036      10      55 ..     102     145 ..      96     168 .. 0.82
   2 ?   -1.4   0.0       1.3   1.2e+03      61      79 ..     610     628 ..     605     640 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 4e-05
      ATPase  10 eilkgGipegrvvlitGepGtGKtifalqFlikgaekygepgvfvt 55 
                  i+ + i ++rv+ i+Ge+G+GK++   qFl +  e   e +v +t
  EPX74581.1 102 AIC-QKIQDNRVIVIVGETGSGKSTQIPQFLNEC-EYAKEGCVGIT 145
                 454.77999*********************9665.66678888777 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1.3
      ATPase  61 edlrenakslGwdleklee 79 
                 ++lre++ + Gwd+++  e
  EPX74581.1 610 KQLREHCIKAGWDINDNTE 628
                 799**********987655 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   0.0   0.00012      0.11       2      98 ..     110     245 ..     109     262 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00012
      AAA_14   2 rkilvitGaRrvGKTtllkqlikell.........vkkesilyinldderd...................kkladpe........kllelileklke.. 62 
                 ++++vi+G   +GK+t + q+++e           ++++++  +nl +                      +     +                   +  
  EPX74581.1 110 NRVIVIVGETGSGKSTQIPQFLNECEyakegcvgiTQPRRVAAVNLAKRVAqeqntrlgdkvgysirfddS-----TspntrakyL-----T----Dgm 194
                 789******************98877899999999999999999999865544556666666655444320.....1232223221.....1....022 PP

      AAA_14  63 ...........ekktylflDEiqev....pewekalkslvdegknldvivt 98 
                            ++ + l+lDE++e     + +  ++k+++++++ l+viv 
  EPX74581.1 195 llrelindpllSQYHTLILDEAHERtlmtDMLLGFVKKIIKKRPALRVIVM 245
                 2223444577767788*******9844445555566666667788888876 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   1.6e-05     0.014       8      68 ..     101     161 ..      98     245 .. 0.56

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.6e-05
      AAA_30   8 aavealltsgdrvavltGpAGtGKttalkalreaweaa.ggrviglAptgkaAkvLaeelgi 68 
                 +a+ + +++++ v v++G  G+GK+t + +  +  e a +g v +  p   aA +La+ +  
  EPX74581.1 101 DAICQKIQDNR-VIVIVGETGSGKSTQIPQFLNECEYAkEGCVGITQPRRVAAVNLAKRVAQ 161
                 56777777775.****************9996666666244444444555555557754332 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0     2e-05     0.018       7     122 ..     107     227 ..     100     243 .. 0.59

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 2e-05
      AAA_19   7 alkekvllvtaGpGtGKTrvlkhivallvelggvkp.....eeillvaftgrAakelrerlaalgae........atTiHrlalldfddlltealelle 92 
                    ++v+++++  G+GK++ + + +++++ +++  +     +++++v +++r a+e ++rl     +               +  ++  +  +   ll+
  EPX74581.1 107 IQDNRVIVIVGETGSGKSTQIPQFLNECEYAKEGCVgitqpRRVAAVNLAKRVAQEQNTRLGD---KvgysirfdD-----STSPNTRAKYLTDGMLLR 197
                 457899999**************9999988875322233336666666666666666666622...2333333331.....211222222212222333 PP

      AAA_19  93 eaeeekklqeee.llivDEfqdvdelqyrLl 122
                 e   +++l +++ +li DE+ + + +   Ll
  EPX74581.1 198 E-LINDPLLSQYhTLILDEAHERTLMTDMLL 227
                 4.4455666888899****988765555555 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   7.6e-05     0.069      11      38 ..      99     126 ..      90     128 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 7.6e-05
      AAA_29  11 tfdghtieidlkgatlltGpsGsGKSTl 38 
                   d    +i+ + +++++G++GsGKST 
  EPX74581.1  99 AKDAICQKIQDNRVIVIVGETGSGKSTQ 126
                 555555566656699************5 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0    0.0001     0.094      30      62 ..     107     139 ..     101     172 .. 0.80
   2 ?   -3.6   0.0       7.7   6.9e+03      49      91 ..     321     363 ..     320     371 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.0001
       AAA_7  30 lknkkpvllvGptGtGKtviikdllkkldkeky 62 
                 ++ ++ +++vG+tG+GK++ i ++l++++  k 
  EPX74581.1 107 IQDNRVIVIVGETGSGKSTQIPQFLNECEYAKE 139
                 67788999******************9986555 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 7.7
       AAA_7  49 iikdllkkldkekylsltinfsaqtsanqlqdiiesklekrrk 91 
                 +ikd+ k+l+++k+++  + + a+   +q + +++  l  +rk
  EPX74581.1 321 LIKDYAKQLPSNKLQIQACPLFASLPQEQQMLVFQPTLPNHRK 363
                 6889999999999999888888877777766666666666665 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00011     0.098       2      99 ..     111     218 ..     110     244 .. 0.65

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00011
     DUF2075   2 avvlVtGvaGtGKtvvllnllael.........eddeeertavylsvNhplvlvlrealakkeekkkkkeafeklssfinnlsef............kk 79 
                 +v+++ G++G+GK+    ++l+e+               + + ++ v       l +++a+++ +++ ++++ ++  f  ++s              ++
  EPX74581.1 111 RVIVIVGETGSGKSTQIPQFLNECeyakegcvgI----TQPRRVAAV------NLAKRVAQEQ-NTRLGDKVGYSIRFDDSTSPNtrakyltdgmllRE 198
                 799*********************3322222110....122222222......2333333333.34444444444444444333333444566689999 PP

     DUF2075  80 aeekkeepkedvvivDEAhr 99 
                  +++    + + +i DEAh 
  EPX74581.1 199 LINDPLLSQYHTLILDEAHE 218
                 99*****************5 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   0.00013      0.12      90     122 ..     100     133 ..      79     150 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00013
                  HHHHHHHCTT.SEEEEECSTTSSHHHHHHHHCTT CS
  RsgA_GTPase  90 leelkellkd.ktsvlvGqSGvGKStLinallpe 122
                   +++ ++++d +++v+vG++G GKSt i ++l+e
   EPX74581.1 100 KDAICQKIQDnRVIVIVGETGSGKSTQIPQFLNE 133
                  577888888889**************99877766 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00024      0.21      14      49 ..     108     144 ..      97     148 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00024
  Zeta_toxin  14 erPklillgGqpGAGKselaellkdele.rqgnvvrl 49 
                 +   +i+++G +G+GKs+ +  + +e e +++++v +
  EPX74581.1 108 QDNRVIVIVGETGSGKSTQIPQFLNECEyAKEGCVGI 144
                 5667899*******************99888888877 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00033       0.3       1      43 [.     112     165 ..     112     286 .. 0.65

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00033
      AAA_33   1 lvllvGlpGsGKstlaerllkklg.....avllssdt......lrrrlfgtdqq 43 
                 ++++vG  GsGKst + + l++       +v ++++       l +r++ ++++
  EPX74581.1 112 VIVIVGETGSGKSTQIPQFLNECEyakegCVGITQPRrvaavnLAKRVAQEQNT 165
                 799***************977777777769999999955555533344333222 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0    0.0004      0.36      22      51 ..     109     137 ..      98     243 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.0004
      AAA_16  22 grpelvllsGesGvGKsslvrellralekd 51 
                 +  ++++++Ge G+GKs+ + ++l++ e +
  EPX74581.1 109 D-NRVIVIVGETGSGKSTQIPQFLNECEYA 137
                 3.3899**************9999977766 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   6.4      0.33     3e+02      90     152 ..      27      92 ..       4     111 .. 0.68
   2 ?   11.8   0.5   0.00029      0.26      19      34 ..     110     125 ..     105     338 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.33
      AAA_23  90 iererelskkkgkttkkaklelleideleqfisellgskkiilnlilflgqerfeefel...kdkk 152
                  +++++  kkk+k+  k+  e+ + + l +f++e  +++k++++ ++f ++ ++ ++++   +++k
  EPX74581.1  27 SSESKKIMKKKAKNSFKKGNESGKRNGLVNFMDEDEDRSKEQFDTSAFSKSADKSPKKKsllEQRK 92 
                 4456666677777777777777788*********999***********999996444442222222 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 0.00029
      AAA_23  19 kgltlItGpNGaGKTT 34 
                 + + +I+G++G+GK+T
  EPX74581.1 110 NRVIVIVGETGSGKST 125
                 6789************ PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (717 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       780  (0.0435049); expected 358.6 (0.02)
Passed bias filter:                      527  (0.0293937); expected 358.6 (0.02)
Passed Vit filter:                        91  (0.00507558); expected 17.9 (0.001)
Passed Fwd filter:                        20  (0.00111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              20  [number of targets reported over threshold]
# CPU time: 0.78u 0.34s 00:00:01.12 Elapsed: 00:00:00.52
# Mc/sec: 4133.69
//
Query:       EPX74582.1  [L=1294]
Description: RecQ type DNA helicase Rqh1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.2e-21   75.2   0.0    2.4e-20   73.1   0.0    2.1  2  DEAD           DEAD/DEAH box helicase
    2.2e-20   72.6   0.1    6.3e-20   71.1   0.1    1.9  1  RQC            RQC domain
    3.3e-20   72.5   0.0    2.8e-17   63.0   0.0    2.9  3  Helicase_C     Helicase conserved C-terminal domain
    1.1e-15   58.1   7.6      3e-15   56.7   7.6    1.8  1  RecQ_Zn_bind   RecQ zinc-binding
    3.5e-14   52.5   0.0    7.7e-14   51.4   0.0    1.6  1  HRDC           HRDC domain
     0.0068   16.4   0.0      0.017   15.1   0.0    1.7  1  Helicase_Sgs1  Sgs1 RecQ helicase
  ------ inclusion threshold ------
      0.012   15.6   0.0      0.039   14.0   0.0    1.9  2  ResIII         Type III restriction enzyme, res subunit


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.1   0.0   9.2e-24   2.4e-20       3     175 ..     477     649 ..     475     650 .. 0.83
   2 ?   -1.6   0.0      0.76   1.9e+03      51     104 ..     700     754 ..     684     759 .. 0.75

  Alignments for each domain:
  == domain 1  score: 73.1 bits;  conditional E-value: 9.2e-24
                 HHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTT...C CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...x RF
        DEAD   3 iQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldng...v 98 
                  Q  ai+ +l+g+dv+v ++TG GK+l++++p++   +e +g t+  +l+v+P+ +L++++l++l+k+  + +l ++     +++r+ +s l ++   v
  EPX74582.1 477 NQLDAINGTLSGRDVFVLMPTGGGKSLCYQLPAV---LE-DGVTRGVTLVVSPLLSLMQDQLEHLRKINIP-SLPLSGEQPADERRKVISFLMAEkvmV 570
                 6999******************************...56.89**************************996.45565556677777777777543478* PP

                 SEEEEEHHHHHHHH.....HCTSSHCTTEEEEEEETHHHHHHT..TTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHHHH CS
                 xxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  99 divvgtpgrlddll.....stgklnlsqvrflVlDEadrlldq..gfsdfinrilnqlpqitcdgklqrqvivlSATlpkdvkk 175
                 ++++ tp+ l++        ++  + + +  +V+DEa++++ +  +f++++++ l +l++ +   +    +++l+AT+++ vkk
  EPX74582.1 571 KLLYVTPEGLASNGaitrvLKNLYDRKLLARIVIDEAHCVSHWghDFRPDYKQ-LGALRDSYRGVP----LMALTATANEVVKK 649
                 *******9999965543332222335555669***********999*******.999998888888....********988886 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.76
                 EEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTT.CSEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxx RF
        DEAD  51 livePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldng.vdivvgt 104
                 +i + +r  +eq++++l+k        +++ i ++++++ +s+ ++g ++i+v+t
  EPX74582.1 700 IIYCLSRTSCEQVADKLRKEYGLKAWYYHAGIDKNERQRIQSEWQAGnYNIIVAT 754
                 5666678889999999988777544566677888888777888876679999998 PP

>> RQC  RQC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.1   0.1   2.5e-23   6.3e-20       3     112 ..     875     992 ..     873     994 .. 0.92

  Alignments for each domain:
  == domain 1  score: 71.1 bits;  conditional E-value: 2.5e-23
                 -EEE-HHHHHHHHHHHHHTTS-SBHHHHHHHHHT---CCCCCTTGGGSTTTTTTTTS-HHHHHHHHHHHHHTTSEEEE.......SSS.BEEE-CCG.. CS
         RQC   3 etvDvteeaqkilscvyrtgqrfgaghivdvLrGsktkkirqlghdklstfGigkdlskkewrrlirqLiaegyLeedve.....eyg.vlklteka.. 93 
                  ++D+t+ a k++++++++ +++++ +++dv+rGsk +ki ++g+d+l+  G gk l++ + +rl++qL+aeg+  e+ve     +++ ++  +++   
  EPX74582.1 875 IKKDMTDIAAKAIKLIRSLSGKTTLLQLIDVFRGSKGAKIIENGWDRLEGAGDGKSLNRGDSERLFHQLVAEGIFVEKVEanrrgFVSaYVFPGRQTll 973
                 689************************************************************************888888999988878888888666 PP

                 HHHHTSSS--EEESHHHXS CS
         RQC  94 revlkgeekvklreekkks 112
                 ++v++g+++v l++++++s
  EPX74582.1 974 NAVIAGKHRVILEIKQESS 992
                 99999******99998876 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.1   0.0    0.0052        13      10      60 ..     511     561 ..     502     576 .. 0.77
   2 !   63.0   0.0   1.1e-20   2.8e-17       4     110 ..     684     791 ..     681     792 .. 0.94
   3 ?   -3.4   0.0       4.7   1.2e+04      17      35 ..     831     852 ..     825     863 .. 0.68

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0052
                 HHHTTTTSEEEEEESSHHHHHH.HHHHHHHTTSTEEEESTTSTHHHHHHHHH CS
  Helicase_C  10 lkleeeggkilifvntidrlek.vklllekkgikvavlhgelpqnereeile 60 
                 l+  + +g +l++++  + +++ ++ l +k +i +++l ge p++er+++++
  EPX74582.1 511 LEDGVTRGVTLVVSPLLSLMQDqLEHL-RKINIPSLPLSGEQPADERRKVIS 561
                 466778889999999999554337777.3448*****************997 PP

  == domain 2  score: 63.0 bits;  conditional E-value: 1.1e-20
                 HHHHHHHHHTTTTSEEEEEESSHHHHHH.HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHHHH CS
  Helicase_C   4 eallellkleeeggkilifvntidrlek.vklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvtsyi 101
                   l+++l++ + ++  +i++ +++++e+ ++ l+++ g+k+ ++h+ + +ner++i +++++g++++++at + ++G+d  +v++Vi+ ++p++++ y 
  EPX74582.1 684 TELYRFLSNGHMHESGIIYCLSRTSCEQvADKLRKEYGLKAWYYHAGIDKNERQRIQSEWQAGNYNIIVATIAFGMGVDKGDVRFVIHHSFPKSLEGYY 782
                 5678888889999999**********99989998888************************************************************** PP

                 HHHTTSSST CS
  Helicase_C 102 qriGRtgRa 110
                 q  GR+gR 
  EPX74582.1 783 QETGRAGRD 791
                 ********6 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 4.7
                 SEEEEEESSHHHHHH...HHHH CS
  Helicase_C  17 gkilifvntidrlek...vkll 35 
                 ++++ f+++++++ +   + ++
  EPX74582.1 831 RQVIQFCENKSDCRRkqiLAYF 852
                 6899999999988653344444 PP

>> RecQ_Zn_bind  RecQ zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.7   7.6   1.2e-18     3e-15       1      65 [.     803     868 ..     803     869 .. 0.94

  Alignments for each domain:
  == domain 1  score: 56.7 bits;  conditional E-value: 1.2e-18
  RecQ_Zn_bind   1 lqDvsrlrrlieqseesekekeaelekleamlaycentteCrrkllleyFgeeaaeeeCgn.CDnC 65 
                   ++D ++ +rli ++++++++k++++++l++++++cen+++Crrk++l yFge++++++C + CD+C
    EPX74582.1 803 YKDHVTFQRLIMSGDGDAETKDRQRHMLRQVIQFCENKSDCRRKQILAYFGESFDRAQCSRgCDIC 868
                   58999******99999****************************************9**666**** PP

>> HRDC  HRDC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.4   0.0     3e-17   7.7e-14       2      68 .]    1076    1142 ..    1075    1142 .. 0.98

  Alignments for each domain:
  == domain 1  score: 51.4 bits;  conditional E-value: 3e-17
                  HHHHHHHHHHHHHHHHHHTS-HHHHS-HHHHHHHHHH---SHHHHHTSTTT-HHHHHHHHHHHHHHH CS
        HRDC    2 lallkaLrewReelAreedvppyvvfpdktLleiAeklPttleeLlqiegvgkrklekygeeileai 68  
                  ++++ +L+++R +l+  +d + ++ f+d++L ++A+klP+++ eL++i+gv+  ++e+ g+++l++i
  EPX74582.1 1076 NRCFAELKALRSNLMALNDSRVGTYFTDAMLYSMAQKLPRNTTELKEIHGVSGERAERVGPQFLQII 1142
                  68***************************************************************98 PP

>> Helicase_Sgs1  Sgs1 RecQ helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   6.7e-06     0.017       3      61 ..    1073    1131 ..    1071    1149 .. 0.87

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 6.7e-06
                     -HHHHHHHHHHHHHHHHHHSSSS--S-SS-HHHHHHHHHH---SHHHHGGGS---HHHH CS
  Helicase_Sgs1    3 nelkvayerlravainlgnrmnlpvdtylpdnilkkiAaiLPatedeFislvgnndkar 61  
                     + ++ ++  l+a+  nl       v+ty+ d++l  +A++LP +  e   + g+  + +
     EPX74582.1 1073 DIMNRCFAELKALRSNLMALNDSRVGTYFTDAMLYSMAQKLPRNTTELKEIHGVSGERA 1131
                     56799*******************************************99999876664 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   1.5e-05     0.039       4     169 ..     474     643 ..     471     645 .. 0.75
   2 ?   -3.9   0.0       4.6   1.2e+04      85     111 ..     729     755 ..     710     756 .. 0.69

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1.5e-05
                 E-HHHHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--...... CS
      ResIII   4 lreyQeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkeekflflvprkslleqtleefkkflseaykeigkkvsgdkkka...kek 99 
                 +r+ Q +ai+ +l+ +       +++ m+TG GK+l++ +l + l     +  +l++ p +sl++  le+++k+  +     g+   ++++k     + 
  EPX74582.1 474 FRNNQLDAINGTLSGR------DVFVLMPTGGGKSLCY-QLPAVLEDGVTRGVTLVVSPLLSLMQDQLEHLRKINIPSLPLSGEQPADERRKVisfLMA 565
                 6777777787777444......58999********987.44444455455559*********************9998644444433333333688888 PP

                 ....-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS......TTTHHH...HHT---SEEEEEESS- CS
      ResIII 100 dstnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgak.....kswrei...lekfkeavllglTATp 169
                 ++   k+l +t + l ++   ++  ++ ++r+    i+iDEaH ++         ++++    ++++   l++lTAT 
  EPX74582.1 566 EKVMVKLLYVTPEGLASNGAITRVLKNLYDRKLLARIVIDEAHCVSHWghdfrPDYKQLgalRDSYRGVPLMALTATA 643
                 9999999999999999999888999******************88876544543566554446666778888888886 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 4.6
                 GEEEESSS-B--.......-SEEEEEH CS
      ResIII  85 igkkvsgdkkkakekdstnkkilvtti 111
                 +g ++++++++++e ++ n +i+v+ti
  EPX74582.1 729 AGIDKNERQRIQSEWQAGNYNIIVATI 755
                 677778888888899999999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1294 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       787  (0.0438954); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.83u 0.33s 00:00:01.15 Elapsed: 00:00:00.49
# Mc/sec: 7915.60
//
Query:       EPX74583.1  [L=527]
Description: vacuolar amino acid efflux transporter Atg22 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   9.8e-102  341.0  16.7   1.2e-101  340.7  16.7    1.0  1  ATG22     Vacuole effluxer Atg22 like


Domain annotation for each model (and alignments):
>> ATG22  Vacuole effluxer Atg22 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  340.7  16.7  6.7e-106  1.2e-101       2     470 ..      15     519 ..      14     524 .. 0.95

  Alignments for each domain:
  == domain 1  score: 340.7 bits;  conditional E-value: 6.7e-106
       ATG22   2 tkkellgWylyafaaevfavvavgsfvPllleqlarenGvllsdksapCsakgdeqcvvkflg.ieidtaSfvlytfslsvllqavvvislsglADygn 99 
                 + +++l+W+lya +a+++a+  +g fvPl++++ ar nG+l+ d++ pCs+ +de+c+v +l  i+idt S+ +  f+ s llq  ++  ++ ++Dygn
  EPX74583.1  15 NVWHILSWILYAGGAGPVATANMGVFVPLVIMKNARTNGFLRRDHTIPCSSFPDESCSVRILHsIWIDTGSILFAAFAFSNLLQLCLMTGVGVVCDYGN 113
                 679***********************************************************99*********************************** PP

       ATG22 100 yrknlLlafaligslstilfllvtpkkYllgavlyivsntcfgaslvllnsfLPllvredpel...qeaeeeeeee....................... 172
                 yr+++L +++ligs+sti++ ++ ++ +  + v ++   ++f +++++++sfLP+l+r +p      + e++ ++e                       
  EPX74583.1 114 YRRYILHLCVLIGSMSTIILPWLPSHLFNFQLVSFLAIDLSFIIAQSCYDSFLPILLRYYPVSntpYTLESALQDEtssigngsfsedstagleneeqf 212
                 **************************999998989999**********************9874443333333333889******************** PP

       ATG22 173 ........eessetaeeeeskelklstriSslGlaigylgailvqiisilivialgstatfslrlalllvGlwWliftipaalllkkrp.gpplpkgls 262
                         +es++  ++ee+++++  +r+Ss+G++  + +ail+q+  + ++++ +   +  + +a++++G wWl+++ p++l++k  + ++  +   +
  EPX74583.1 213 lneqslilNESAPPVDAEEEDKSRIAARLSSVGFSCFFGSAILLQLCLVPLLYKASPD-SLLIPIAITVCGTWWLLLSNPLCLFVKLPNdNQTANPLWK 310
                 *******************************************************998.*************************97555455555777* PP

       ATG22 263 yliygwkslgrtlkqarklkdvllfLvawfllsdgiatvsstavlfaktelkmstaklillsivaviaavlGaflwplvsrrlnlktkktllaiivlfe 361
                 ++ ++ k+ ++ l++a+++  + lfL++ +++++g++t+++ a++++k++l++s+ +++ll++ ++++a+lG++++p+++++++l+  +t+++i++++ 
  EPX74583.1 311 IILDSTKESYHSLQHAMSILPIRLFLFSRLFINCGLQTTLTSAIIIGKSRLNLSNFQVALLGMGISLFALLGTIVLPYLTEYFRLTNLQTVIIIVMILP 409
                 *************************************************************************************************** PP

       ATG22 362 liplyGllGii.lgkiGlkqpwEfyvlavvyglvlgglssysRslfseLiPrGkEaaFFsLyaitdkgssvigplivglItDrtgnirsafvflavLlv 459
                 l+p+yG+lG++     G+ + ++++ ++++ ++ lgg +s +Rs++s+LiP GkE++FF+Ly+++++++ ++g + +++It +t +  + + f++v+++
  EPX74583.1 410 LAPMYGMLGFLpGFDGGICTAADIFRTTIFVSFLLGGAHSFCRSVYSQLIPHGKETRFFALYSLISQAGVFFGQISLTMITSMTTDPGAVYAFIMVVMI 508
                 ***********86679*********************************************************************************** PP

       ATG22 460 vplpllllvdv 470
                 +plp+l+++  
  EPX74583.1 509 LPLPFLWFMYK 519
                 *******9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (527 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       650  (0.0362541); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 3634.56
//
Query:       EPX74584.1  [L=977]
Description: transcription factor TFIID complex subunit Taf111 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   1.6e-182  607.1   0.8   2.3e-182  606.6   0.8    1.2  1  DUF3591    Protein of unknown function (DUF3591)
    2.7e-05   23.9   1.9    6.2e-05   22.8   1.9    1.6  1  zf-CCHC_6  Zinc knuckle
     0.0029   17.6   1.0     0.0051   16.8   1.0    1.4  1  zf-CCHC    Zinc knuckle
  ------ inclusion threshold ------
       0.15   12.7   0.2       0.15   12.7   0.2    2.5  2  LprI       Lysozyme inhibitor LprI


Domain annotation for each model (and alignments):
>> DUF3591  Protein of unknown function (DUF3591)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  606.6   0.8    5e-186  2.3e-182       1     440 [.     361     805 ..     361     806 .. 0.97

  Alignments for each domain:
  == domain 1  score: 606.6 bits;  conditional E-value: 5e-186
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..............x.xxxxxxxxxxxxxxxxxxxx RF
     DUF3591   1 fnlsnDkaYealkenkqskvrstlgnlkveHSlpAlkLqlpfyktklskkelrsfHrprlkvk..............k.kakgkeekellkktkDLslk 84 
                 +nlsnD+aYe+lk+n+qskvr+tl++l++eH+  A kL++p+ykt+lsk+ +rsfHrp++++k              k k+k+k+e+ l+ +tkD+++ 
  EPX74584.1 361 YNLSNDSAYEMLKQNHQSKVRNTLSQLAIEHAAFAEKLTFPYYKTRLSKRAVRSFHRPTMSFKpnaaivfsplnvrkKsKDKHKSERGLIPNTKDMTMG 459
                 8***************************************************************************956999***************** PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
     DUF3591  85 dtskvvllEYseeyPpllsnvGMgsklinYYrkkkekDtsrpklelGetvvlepedksPFlnlGevepgetvqtlennliraPifkhkvkstDFLlirs 183
                 dt++++l+E+see+Pp+lsnvGM+s+++nYYrkk+e+D+srpkle+Ge +vl+++d+sPF+n+G+vepge+++tl+n++iraP+fkh+  +tDF+lir+
  EPX74584.1 460 DTTHAILVEFSEEHPPVLSNVGMASRIVNYYRKKNEQDESRPKLEVGESHVLDVQDRSPFWNFGSVEPGEITPTLYNKMIRAPLFKHELPPTDFILIRN 558
                 *************************************************************************************************** PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
     DUF3591 184 ttkekkkyylreidnlfvvGqtlPlveVpgphsrkvtnfsknrLkviiyrllrkskekrikvedikkafpdqselqiRkrLkefaeyqrkgedsgvWkl 282
                 + + ++kyyl++i+++fv Gqt+P+++Vpgphsrkvt++sknrLk++++rl+r+s++  + +++++++f dq+e+qiR+rLkef+ey++kg+  g+Wkl
  EPX74584.1 559 SSSYGSKYYLKNINHIFVSGQTFPVTDVPGPHSRKVTTASKNRLKMLVFRLIRRSPTGGLFIRQLSQHFSDQNEMQIRQRLKEFMEYKKKGDGPGYWKL 657
                 99************************************************************************************************* PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
     DUF3591 283 keeerlpseeeirklvtPEdvcllesmqvgeqrlkdagyakeeeeeeedekkeeskleleeqlapWnttknFlaAtqgkamlqlhGegDPtGrgegfsf 381
                 k++e +p+e+  r++v+PE+vcllesmqvg q+l+dagy k+ +e ++d   +e+++  e+ lapW tt+nF++Atqgkaml+l GegDPtG+geg+sf
  EPX74584.1 658 KSNEVVPDEAGTRSMVSPETVCLLESMQVGVQQLEDAGYGKTIDEINDD---DEEEQPAEQLLAPWITTRNFINATQGKAMLTLFGEGDPTGIGEGYSF 753
                 ***************************************8887777775...4455689**************************************** PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
     DUF3591 382 vrtsmKegfkkageskeeklkaeaekkgtdadlrklnvaeqqkvyeeeikkiwraqris 440
                 +rtsmK+gfk+ages ++          ++++++++nva+qq++yeeei++iw+aq++ 
  EPX74584.1 754 IRTSMKGGFKPAGESDDRPE-------PQTKNAHAYNVAKQQQAYEEEINRIWNAQKRG 805
                 *********99999888743.......24579************************975 PP

>> zf-CCHC_6  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   1.9   1.4e-08   6.2e-05       2      21 ..     943     962 ..     942     968 .. 0.94

  Alignments for each domain:
  == domain 1  score: 22.8 bits;  conditional E-value: 1.4e-08
   zf-CCHC_6   2 vKCknCGAFGHtarSkrCPm 21 
                  KC nCG  GH+ ++k CP+
  EPX74584.1 943 RKCSNCGQVGHMKTNKICPL 962
                 5******************7 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   1.0   1.1e-06    0.0051       1      14 [.     943     956 ..     943     957 .. 0.89

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 1.1e-06
                 SCTSSSSSSSSTTT CS
     zf-CCHC   1 rkCynCGepGHiar 14 
                 rkC nCG++GH++ 
  EPX74584.1 943 RKCSNCGQVGHMKT 956
                 69*********985 PP

>> LprI  Lysozyme inhibitor LprI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.6      0.41   1.9e+03      13      36 ..     781     812 ..     770     833 .. 0.66
   2 ?   12.7   0.2   3.3e-05      0.15      22      68 ..     876     928 ..     857     954 .. 0.72

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.41
                 HHHHHHHHHHHHHHHHHHHHHHH........H CS
        LprI  13 nqCasaalkaadaeLnkaykalk........e 36 
                 +  ++++ +a ++e+n++++a k        +
  EPX74584.1 781 AYNVAKQQQAYEEEINRIWNAQKrglaisstD 812
                 56678899999999**9998888666655432 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 3.3e-05
                 HHHHHHHHHHHHHH......HHHHH..TT....HHHHHHHHHHHHHHHHHHHHHH CS
        LprI  22 aadaeLnkaykalk......eekek..kavssearkaLkdaqraWikyRdaeCal 68 
                 +  +e++++  al       +e  +  ++++++ +++L+++q++W++ R +++a 
  EPX74584.1 876 KKRREIDEQSTALDavvptgDE--AidRRNRKRLEQELAKSQKNWERRRARHAAK 928
                 5555555555555566664433..244888999*******************933 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (977 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       832  (0.0464053); expected 358.6 (0.02)
Passed bias filter:                      501  (0.0279436); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.74u 0.33s 00:00:01.07 Elapsed: 00:00:00.49
# Mc/sec: 5947.17
//
Query:       EPX74585.1  [L=243]
Description: RNA methyltransferase Tgs1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-47  161.6   0.0    1.5e-47  161.2   0.0    1.1  1  Methyltransf_15  RNA cap guanine-N2 methyltransferase
     0.0079   15.9   0.0      0.012   15.3   0.0    1.2  1  CmcI             Cephalosporin hydroxylase
     0.0088   16.7   0.0      0.015   16.0   0.0    1.4  1  Methyltransf_25  Methyltransferase domain
      0.009   15.8   0.0      0.011   15.4   0.0    1.3  1  Met_10           Met-10+ like-protein
  ------ inclusion threshold ------
      0.024   14.3   0.4       0.25   11.0   0.1    2.4  3  DUF1699          Protein of unknown function (DUF1699)
      0.063   12.9   0.0      0.096   12.3   0.0    1.2  1  Cons_hypoth95    Conserved hypothetical protein 95


Domain annotation for each model (and alignments):
>> Methyltransf_15  RNA cap guanine-N2 methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  161.2   0.0     5e-51   1.5e-47       3     164 ..      75     231 ..      73     232 .. 0.98

  Alignments for each domain:
  == domain 1  score: 161.2 bits;  conditional E-value: 5e-51
  Methyltransf_15   3 vilDlfsGaGGnviqfalvfekviaieinleklacaqhNaevYgv.sdkitlvlgdvfellaklklekikvdlvflSpPwGGpsYkkqekfdlk 95 
                      +i+D+fsG+GGn+iqfa+ f+ vi+ie ++ k+a+a+hN  vY++ ++++t+++gdv+e+l+++ +++  + ++f+SpPwGGpsY+ + +++l 
       EPX74585.1  75 LIIDAFSGCGGNTIQFAK-FCPVISIELDPIKIAMAKHNLSVYEIpASRVTFIQGDVLEVLRSIDFASQFRTIIFMSPPWGGPSYSGKSTYSL- 166
                      79***************9.99************************99**********************************************. PP

  Methyltransf_15  96 kklkplkleqllkeslklskniilfLPrnsdlnqlaaltaevlekaakvkvveikenglvkallaylgk 164
                      ++l p++++ l+ke+++++++i+ fLP+n+d+++la++      +++++ ++++  +g++ka+++y+ +
       EPX74585.1 167 NDLIPYTFDILYKEAVRITPYIAAFLPKNTDIDELAQY----STDKNRIVITNFLYQGYSKAICCYFSM 231
                      **************************************....6899*********************86 PP

>> CmcI  Cephalosporin hydroxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   3.9e-06     0.012      24      95 ..      64     131 ..      49     149 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 3.9e-06
        CmcI  24 yQeliwelkPdliietGiahGGsalfsasllallkskrkvlaididireknrqaieahplasrieliegssv 95 
                  Q +  + +P+lii+  +  GG  + +a+ +  +  + ++  i i + ++n +  e    asr+++i+g+ +
  EPX74585.1  64 AQSIYESHQPELIIDAFSGCGGNTIQFAKFCPVI--SIELDPIKIAMAKHNLSVYEI--PASRVTFIQGDVL 131
                 47888889**************************..777888888889998888887..679*******965 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0     5e-06     0.015       1      69 [.      76     147 ..      76     153 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 5e-06
                      EEEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTT...TEEEEESBC....CGBSSSTTTEEEEE CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeegl...nvefvqgda....edlpfedgsfDlvv 69 
                      ++d+  G G +t+++ak    + v+ +++++  ++ a+++++  ++   +v+f+qgd+    ++++f++ +f  ++
       EPX74585.1  76 IIDAFSGCGGNTIQFAKF---CPVISIELDPIKIAMAKHNLSVYEIpasRVTFIQGDVlevlRSIDFAS-QFRTII 147
                      789999**********87...58******************98777799*********43333345655.555444 PP

>> Met_10  Met-10+ like-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   3.8e-06     0.011      98     166 ..      70     136 ..      45     216 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 3.8e-06
                 --TT-EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-.TTCEEEEES-GGG---T CS
      Met_10  98 veegevVvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkv.ekvvkpileDgrevire 166
                  ++ e+++d f G G  +i  ak      v++i+l+P  + + k+n+   ++ +++v+ i++D+ ev+r+
  EPX74585.1  70 SHQPELIIDAFSGCGGNTIQFAK---FCPVISIELDPIKIAMAKHNLSVYEIpASRVTFIQGDVLEVLRS 136
                 456799**************998...5679*******************999567899*******99984 PP

>> DUF1699  Protein of unknown function (DUF1699)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.62   1.8e+03      86     115 ..      52      81 ..      43      96 .. 0.73
   2 ?    0.1   0.0      0.21   6.2e+02      65      84 ..     119     138 ..      71     147 .. 0.74
   3 ?   11.0   0.1   8.4e-05      0.25      25      69 ..     190     234 ..     187     237 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.62
     DUF1699  86 yyevseevierikelkseglseeeiaekls 115
                 y++ +e+v  +i + + e  + e i++ +s
  EPX74585.1  52 YSVTPERVAYNIAQSIYESHQPELIIDAFS 81 
                 444467888899998888888888887765 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.21
     DUF1699  65 eiqgiellegdvwghrkdin 84 
                   +++++++gdv    ++i+
  EPX74585.1 119 PASRVTFIQGDVLEVLRSID 138
                 45678889999988777665 PP

  == domain 3  score: 11.0 bits;  conditional E-value: 8.4e-05
     DUF1699  25 afrpsntdilslvkkcpklkaiqvpeSykktlsksakmfleiqgi 69 
                 af p ntdi +l + + + + i +++  ++  sk++  +++++ +
  EPX74585.1 190 AFLPKNTDIDELAQYSTDKNRIVITNFLYQGYSKAICCYFSMKSV 234
                 8*****************************************976 PP

>> Cons_hypoth95  Conserved hypothetical protein 95
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   3.2e-05     0.096      39     124 ..      70     154 ..      55     167 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 3.2e-05
                    CHCC-EEEETT-TTSHHHHHHHHTT-SEEEEEES-HHHHHHHHHHHCCCT--TTTEEEEES-HHHHCTS--SS-EE.EEEEE--SSS CS
  Cons_hypoth95  39 eiegarvLDlfaGsGalglEAlSRgakkavlvekdkeavkilkenleelkleeetaelkedaleallklakkkeef.divflDPPya 124
                      + + ++D f+G G+  +  +  +   ++ +e d+  +++ k+nl+  ++ ++  ++++ ++ ++l+    +++f  i+f+ PP+ 
     EPX74585.1  70 SHQPELIIDAFSGCGGNTIQFA--KFCPVISIELDPIKIAMAKHNLSVYEIPASRVTFIQGDVLEVLRSIDFASQFrTIIFMSPPWG 154
                    36667799**********9876..5568999**********************777777777777777777777774799*****86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (243 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       447  (0.0249317); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1736.07
//
Query:       EPX74586.1  [L=263]
Description: WLM domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.7e-42  143.5   4.7    1.1e-38  133.2   0.0    2.1  2  WLM           WLM domain
    0.00046   20.3   0.9    0.00056   20.0   0.1    1.7  2  DUF45         Protein of unknown function DUF45
  ------ inclusion threshold ------
      0.052   13.7   0.0      0.091   12.9   0.0    1.4  1  Reprolysin_5  Metallo-peptidase family M12
      0.094   13.2   0.0       0.26   11.8   0.0    1.8  3  Reprolysin_3  Metallo-peptidase family M12B Reprolysin-like


Domain annotation for each model (and alignments):
>> WLM  WLM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.2   0.0   2.6e-42   1.1e-38       6     139 ..      17     147 ..      12     153 .. 0.92
   2 !    9.7   3.4   0.00018      0.82     117     189 ..     153     236 ..     148     238 .. 0.80

  Alignments for each domain:
  == domain 1  score: 133.2 bits;  conditional E-value: 2.6e-42
         WLM   6 ikvlkkkpekeaalellkriakdvqpimkkhkfkVglLtElaPkeanlLGlNvnkGekieLrLRtdkddkeflpyesimgtllHELaHnvygpHdakFy 104
                 i+++k   ++  a+++l+ria++  pimk+++f +++L E+ ++++ ++G N+n+Ge++eL LR++    ++lp+e +m+++lHEL+H++ gpHd+ Fy
  EPX74586.1  17 ITAVK-DAQERFAKDYLNRIAAMAFPIMKNNGFGITSLDEVTYNSQ-FWGRNWNRGECVELVLRDSRG--NWLPFEFVMDVFLHELCHIWRGPHDKTFY 111
                 55555.567888*******************************998.******************996..***************************** PP

         WLM 105 allkeLekeveelkakGlk.egflkeGkrlggkevr 139
                 ++l++L++e++el+ak +k  g+++++++++ ++v 
  EPX74586.1 112 NHLSHLRQELTELYAKSYKgPGKYMTWDSFSLANVV 147
                 ******************999******999988775 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00018
         WLM 117 lkakGlk.egflkeGkrlggkevrnksaeeeeekealekagiagkgarlGgrseekt..........rskasareliaaAaerR 189
                 +  +G++ ++ + +G  l g++ ++k +++++ +  +++++ a+ g++lG++ +e++          ++ +  re+ + Aa +R
  EPX74586.1 153 VAHRGVTlTSSTPSGIDLCGGSLQRKRNKRSATGSRVGRKKNAKTGQKLGSNLDERKnmlqstskpqARSNRGREARLVAAVKR 236
                 56789998889999************99************************99544466666666655555566666666666 PP

>> DUF45  Protein of unknown function DUF45
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.1   1.2e-07   0.00056     162     196 ..      86     120 ..      17     127 .. 0.83
   2 ?   -3.0   0.1       1.4   6.4e+03     101     101 ..     209     209 ..     176     242 .. 0.50

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 1.2e-07
       DUF45 162 ppevidYVvvHElaHlleknHskrFwalvekllPd 196
                 p e++  V +HEl+H++   H k F++++++l  +
  EPX74586.1  86 PFEFVMDVFLHELCHIWRGPHDKTFYNHLSHLRQE 120
                 566666799*******************9987655 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.4
       DUF45 101 r 101
                 +
  EPX74586.1 209 K 209
                 1 PP

>> Reprolysin_5  Metallo-peptidase family M12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0     2e-05     0.091     105     182 ..      45     135 ..      14     148 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2e-05
  Reprolysin_5 105 sggvGlAwlgqlcnsgsagsvstrveks.........nsvvvstatevqvvaHElGHnfGavHDcdsss.....esqsCslsnstepaggry 182
                   ++g G+ +l ++++++++++ +++              ++++     ++v+ HEl H +  +HD +         +  + l++++ ++ g+y
    EPX74586.1  45 NNGFGITSLDEVTYNSQFWGRNWNRGECvelvlrdsrGNWLP-FEFVMDVFLHELCHIWRGPHDKTFYNhlshlRQELTELYAKSYKGPGKY 135
                   344688888888888888888877555566666666444444.555589***************9964333443333333333555555555 PP

>> Reprolysin_3  Metallo-peptidase family M12B Reprolysin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   5.7e-05      0.26      78     124 .]      47     107 ..      16     107 .. 0.73
   2 ?   -2.9   0.0         2   9.1e+03      95      97 ..     182     184 ..     144     216 .. 0.59
   3 ?   -2.5   0.0       1.6   7.1e+03      44      52 ..     209     217 ..     176     238 .. 0.52

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 5.7e-05
  Reprolysin_3  78 vgGlAyvgsvcnsskkagvnsgssvlgkvga.................dtvaHEiGHnfganHt 124
                   + G+  +  v+++s+  g n++ +                        d++ HE+ H ++ +H+
    EPX74586.1  47 GFGITSLDEVTYNSQFWGRNWNRGECV---ElvlrdsrgnwlpfefvmDVFLHELCHIWRGPHD 107
                   456666667777777766666664333...233347777777777777***************7 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2
  Reprolysin_3  95 gvn 97 
                    ++
    EPX74586.1 182 RSA 184
                   222 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 1.6
  Reprolysin_3  44 tealdelae 52 
                   + +l+++++
    EPX74586.1 209 KNMLQSTSK 217
                   223333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       731  (0.0407719); expected 358.6 (0.02)
Passed bias filter:                      580  (0.0323498); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 1926.72
//
Query:       EPX74587.1  [L=258]
Description: short chain dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.5e-51  173.1   0.1    5.4e-51  172.8   0.1    1.1  1  adh_short        short chain dehydrogenase
    8.6e-34  117.1   0.0    1.1e-33  116.8   0.0    1.0  1  adh_short_C2     Enoyl-(Acyl carrier protein) reductase
    2.6e-11   43.7   0.0    3.4e-11   43.4   0.0    1.1  1  KR               KR domain
    0.00048   19.4   0.1     0.0015   17.8   0.1    1.8  1  Polysacc_synt_2  Polysaccharide biosynthesis protein
  ------ inclusion threshold ------
      0.029   14.6   0.1      0.039   14.2   0.1    1.4  1  Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding doma


Domain annotation for each model (and alignments):
>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  172.8   0.1   1.5e-54   5.4e-51       1     189 [.       7     198 ..       7     204 .. 0.96

  Alignments for each domain:
  == domain 1  score: 172.8 bits;  conditional E-value: 1.5e-54
                 SEEEEESTTSHHHHHHHHHHHH.TT-EEEEEESCHHHHHHHHHHHHHT.TSEEEEEE-TTTSHHHHHHHHHHHHHHHSSESEEEE---S.S--SSGGGC CS
   adh_short   1 kvvlvtGassGIGraiakelak.eGakvvvvdrseekleevakelkee.gakalaiqvDvtdreevealvekavkklgkldvLvnNAGi.tgsgpfsel 96 
                 k++l+tGassGIG+ +a+e+ak + +k+++ +r+  ++ee+ak l+++ + ++l+i++Dv+d e++ +++e+  k++  +dvLvnNAG+  g+  +++l
  EPX74587.1   7 KTILITGASSGIGKSTAYEFAKvAKVKLILGARRLPTVEEIAKDLHSKySVSVLPIKLDVSDLESIPKVIENLPKDFADIDVLVNNAGLaIGVDRVKDL 105
                 79*******************9456777889**********************************************************888999**** PP

                 SHHHHHHHHHHHTHHHHHHHHHHHHHHHHCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHHHHH CS
   adh_short  97 seeewervievNltgvflltravlpamlkqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdmake 189
                 + ++  r++ +N+ g++ +tra+lp   k+ +G+Ivnv+S+ag+++++g+++Y+++K ava++t++l+ke  +tgirv+ v PG v+T++ + 
  EPX74587.1 106 KVDDAVRMMTTNVLGLMAMTRAILPLYYKKGKGDIVNVGSIAGRESYPGGSVYCSTKSAVAQFTSALRKETIDTGIRVMEVDPGQVETEFSMV 198
                 ****************************************************************************************98875 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.8   0.0   3.1e-37   1.1e-33       1     228 [.      13     243 ..      13     244 .. 0.84

  Alignments for each domain:
  == domain 1  score: 116.8 bits;  conditional E-value: 3.1e-37
                   TTTTSHHHHHHHHHHH.TT-EEEEEESSGGH.HHHHHHHHHHTTSEE..EE--TTSHHHHHHHHHHHHHHHSSEEEEEE-----EGCSS-GGGH-HH CS
  adh_short_C2   1 GaasgIGraiAkalae.eGaevvltdlneea.kkrveelaeelgaev..lecDVtdeeqvealveevvekfgklDilvnnagiapklkgpfletsre 93 
                   Ga sgIG+ +A ++a+ +  +++l  ++    ++ +++l+++++ +v  +++DV+d e++ +++e++ ++f  +D+lvnnag a     ++ +++ +
    EPX74587.1  13 GASSGIGKSTAYEFAKvAKVKLILGARRLPTvEEIAKDLHSKYSVSVlpIKLDVSDLESIPKVIENLPKDFADIDVLVNNAGLAIG-VDRVKDLKVD 108
                   899***********98345556665555555444455555555555589************************************9.99******** PP

                   HHHHHHHHHTHHHHHHHHHHHH.HCTSC.CEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCTGGGGSTTHHHH CS
  adh_short_C2  94 efdraldvnlyslfllakaalp.lmkeg.gsivnlssvgaervvpnynaygaaKaalealtrylAvelgpkgiRvNavspgpikTlaasgikgfdel 188
                   +  r++ +n+ +l+++++a+lp + k+g g ivn+ s++++ + p+ ++y+ +K a+ ++t +l +e  + giRv  v pg ++T+ +      +  
    EPX74587.1 109 DAVRMMTTNVLGLMAMTRAILPlYYKKGkGDIVNVGSIAGRESYPGGSVYCSTKSAVAQFTSALRKETIDTGIRVMEVDPGQVETEFSMVRY--SGD 203
                   **********************7667778********************************************************9854433..222 PP

                   HHHHHHHSTTSS-B-HHHHHHHHHHHCSGGGTT--SEEEE CS
  adh_short_C2 189 leelearaplgrlgtpeevaeaalfLasdeasyitGqtlv 228
                    e++ + +   +   pe++ae+++f +s + s +   tlv
    EPX74587.1 204 HEKAGNVYKGYEPLIPEDIAEVIVFTVSRRPSVVIADTLV 243
                   3444444444555679*************99999887775 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.4   0.0   9.4e-15   3.4e-11       2     166 ..       8     175 ..       7     189 .. 0.87

  Alignments for each domain:
  == domain 1  score: 43.4 bits;  conditional E-value: 9.4e-15
                 EEEEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHT.T-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE-----.----TT CS
          KR   2 tylitGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaeleal.gaevevvaaDvsdkdavealleeikaeeppikGvihaAgvl.rdklle 98 
                 t litG+  g+G+++a   a+ ++ +l+l +R+    ++ ++  + l+++  ++v  +++Dvsd +++ +++e++ ++++ i   ++ Ag++   + ++
  EPX74587.1   8 TILITGASSGIGKSTAYEFAKVAKVKLILGARR---LPTVEEIAKDLHSKySVSVLPIKLDVSDLESIPKVIENLPKDFADIDVLVNNAGLAiGVDRVK 103
                 679******************************...4566667788887669*************************************97516899** PP

                 T--HHHHHHHHTTTTHHHHHHHHHTTT....S--SEEEEEEEHHHHH--TT-HHHHHHHHHHHHHHHHHHHH CS
          KR  99 emtaedleqvlapKvkGawnLhelled....esldffvlfSSiagllgsagqanYaaaNaflDalaeyrrsq 166
                 +++ +d  +++   v G+  + +++ +    +    +v + Siag    +g + Y ++ + + ++ +  r++
  EPX74587.1 104 DLKVDDAVRMMTTNVLGLMAMTRAILPlyykKGKGDIVNVGSIAGRESYPGGSVYCSTKSAVAQFTSALRKE 175
                 ***********************9988666544556889999999999999999999888887777766655 PP

>> Polysacc_synt_2  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.1   4.1e-07    0.0015       1     171 [.       9     203 ..       9     231 .. 0.72

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 4.1e-07
                      EEEETTTSHHHHHHHHHHHHHB-SEEEEEES-HHHHHHHHHH......-TTEEEE....E--TT-HHHHHHHTT.......T-SEEEE-----. CS
  Polysacc_synt_2   1 vlvtGagGsiGselvrqilkkkpkkiillerdElklyeiekeleeelkkkklkveivpvigdvrdkerlekaleel.....kvdvvfhaAAlK. 88 
                      +l+tGa+  iG++   +++k    k+il  r   ++ ei+k+l+     +k++v+++p+  dv d e++ k++e+l     ++dv+++ A l  
       EPX74587.1   9 ILITGASSGIGKSTAYEFAKVAKVKLILGARRLPTVEEIAKDLH-----SKYSVSVLPIKLDVSDLESIPKVIENLpkdfaDIDVLVNNAGLAi 97 
                      89****************************************94.....455667789999*********999975333337888888886642 PP

                      -HHHHHH....SHHHHHHHHHHHHHHHHHHHH....HTT-SEEEEEEE...GGGSS--SHHHHHHHHHHHHHHHGGG--SSS-........... CS
  Polysacc_synt_2  89 hVPlvee....npleaiktNvlgtenvieaai....eagvkkvvliSt...DKAvnPtnvmGatKrlaekllqalakeseekk........... 160
                       V  v       ++ +++tNvlg + + +a +    ++g  ++v + +          +v+  tK +  +++ al+ke+ ++            
       EPX74587.1  98 GVDRVKDlkvdDAVRMMTTNVLGLMAMTRAILplyyKKGKGDIVNVGSiagRESYPGGSVYCSTKSAVAQFTSALRKETIDTGirvmevdpgqv 191
                      3444443111267788899999988777765422225555556665431104444456889999999999999998888777788888888888 PP

                      .-EEEEEEE-EE CS
  Polysacc_synt_2 161 .tkfvvvRfGNV 171
                       t+f++vR+   
       EPX74587.1 192 eTEFSMVRYSGD 203
                      888888888555 PP

>> Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.1   1.1e-05     0.039       1      77 [.       9      93 ..       9     184 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 1.1e-05
                     EEEE--.SHHHHHHHHHHHCTCCT-GEEEEEESSHHHHHHHHCHH...TTTCEEEEE--TTTHHHHHHHHHTTS.......SEEEE-S CS
  Sacchrp_dh_NADP  1 vliiGa.GsvGqavaellarhfdvdaeitvadrskeklealaaka...lgvrfeaialdaenyeavLaallkeg.......dlvvnls 77
                     +li Ga  ++G+++a + a+  +v  ++++  r +  +e++a+++    +v++ +i+ld+++ e+ + ++++         d++vn +
       EPX74587.1  9 ILITGAsSGIGKSTAYEFAKVAKV--KLILGARRLPTVEEIAKDLhskYSVSVLPIKLDVSDLES-IPKVIENLpkdfadiDVLVNNA 93
                     78999999****************..9********999999999888899**************9.8777776666546666666544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (258 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      471  (0.0262703); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 1808.27
//
Query:       EPX74588.1  [L=881]
Description: calcium permease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.5e-22   78.1  35.3    5.8e-14   52.3  15.5    3.9  4  Na_Ca_ex  Sodium/calcium exchanger protein
    4.2e-08   33.8  13.7    4.2e-08   33.8  13.7    4.3  5  YccF      Inner membrane component domain
  ------ inclusion threshold ------
       0.11   11.8   1.4       0.29   10.5   1.4    1.6  1  OSTMP1    Osteopetrosis-associated transmembrane protein 1 pr
       0.17   11.5   0.0       0.43   10.2   0.0    1.6  1  FAM176    FAM176 family


Domain annotation for each model (and alignments):
>> Na_Ca_ex  Sodium/calcium exchanger protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   1.5      0.89     4e+03     104     121 ..     223     240 ..     212     263 .. 0.66
   2 ?    0.0   1.1      0.16   7.3e+02     108     144 ..     325     357 ..     304     364 .. 0.68
   3 !   40.7  11.8   4.8e-14   2.1e-10       3     146 ..     446     620 ..     444     625 .. 0.74
   4 !   52.3  15.5   1.3e-17   5.8e-14       2     147 ..     724     874 ..     723     878 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.89
                 HHHHHHHHHHHHHHHHTC CS
    Na_Ca_ex 104 gllllvallllllvllll 121
                 +l++++ l++l++ ll +
  EPX74588.1 223 PLFSVMFLCFLFFSLLSY 240
                 455555555555444433 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.16
                 HHHHHHHHHHHHTCHHHHHHTEEHHHHHHHHHHHHHH CS
    Na_Ca_ex 108 lvallllllvlllllplfvpgrltvleglvllllYal 144
                  v++++  +++++ll++     l ++ ++++++++++
  EPX74588.1 325 SVSMVI-YYTFFYLLIT---PSLLLVSAICMFSIFFI 357
                 333333.3344434444...89999999999999986 PP

  == domain 3  score: 40.7 bits;  conditional E-value: 4.8e-14
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHBTTSSCECCH CS
    Na_Ca_ex   3 fvlfilslllisvladflvssaeeiakslgisgsvlGltllAlgnslpElissiiaaltgevdlaignvlGsnifnlllviGlialigslkvdseslkl 101
                 +v+f +sl+ i++la f+  ++++i+     s   +G +++A+++s++E+++  +a+++g+++l+ g+++Gs+++ lll+ Gl+++ g++ ++ + +++
  EPX74588.1 446 MVIFTASLISIIPLAYFIGMAVASIS---AQSSMGMGAFINAFFGSVIEVFLYSVALRKGNAQLVEGSIIGSILAGLLLMPGLSMCAGAVRKKFQFFNI 541
                 799***********************...889999****************************************************996666666666 PP

                 HHHHHHHHHHHHHHHHHHTCHHHHH....................................HTEEHHHHHHHHHHHHHHHH CS
    Na_Ca_ex 102 dlgllllvallllllvlllllplfv....................................pgrltvleglvllllYalyl 146
                 +  +  + ++ll++++ + + p+ +                                     +  t+  +++lll Ya+ l
  EPX74588.1 542 KS-AGATSTMLLFAVLGV-FAPTMLfqiygsftlectscgpecktctkrfvllnddfyqerIRPFTYICAVLLLLSYAIGL 620
                 66.444555555443332.22322234466666666666666666666666666666655545555555555555555555 PP

  == domain 4  score: 52.3 bits;  conditional E-value: 1.3e-17
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHBTTSSCECC CS
    Na_Ca_ex   2 lfvlfilslllisvladflvssaeeiakslgisgsvlGltllAlgnslpElissiiaaltgevdlaignvlGsnifnlllviGlialigslkvdseslk 100
                 ++v+++ ++++ +++a++lv++++ +  +  is+++lGl+l+Al+ + +E++ +i++al++++ l++    + +++++ll i++ + ++++ ++s+  +
  EPX74588.1 724 SAVILLSATFAYALIAEILVQNVDTVMVKYSISEKLLGLILFALVPNTTEFMNAISFALNDNIALSMEIGSAYALQVCLLQIPCLMAYSAFEYHSSGAT 822
                 6899***********************99***********************************************************99999998866 PP

                 HHH.HHHHHHHHHHHHHHHHTCHHHHH......HTEEHHHHHHHHHHHHHHHHH CS
    Na_Ca_ex 101 ldl.gllllvallllllvlllllplfv......pgrltvleglvllllYalylv 147
                 l++  l+ l+   + + ++++++  f+      +g+ t+++g +l+l+Y++ ++
  EPX74588.1 823 LTFeHLFTLIF-PS-WDMICIMICVFLltyvhsEGKSTYFKGSILVLAYLVSMF 874
                 66633333332.21.2222222222222234668****************9987 PP

>> YccF  Inner membrane component domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.8  13.7   9.5e-12   4.2e-08       1      51 []     211     266 ..     211     266 .. 0.95
   2 ?    3.7   6.2     0.024   1.1e+02       5      42 ..     330     367 ..     328     371 .. 0.88
   3 ?   -4.0   0.1         4   1.8e+04      41      48 ..     516     523 ..     512     530 .. 0.62
   4 ?   -4.1   0.7         4   1.8e+04      17      23 ..     840     846 ..     828     854 .. 0.50
   5 ?   -3.3   0.6       3.5   1.6e+04      10      26 ..     861     877 ..     858     879 .. 0.71

  Alignments for each domain:
  == domain 1  score: 33.8 bits;  conditional E-value: 9.5e-12
        YccF   1 lgNilWlllfGwwlaliyllaglllfitii.....gipygrvlfklakyllwPFGk 51 
                 ++N++W+ +fG++l+ +++l+ l++ ++       +i y r++ +l++yll+PFG+
  EPX74588.1 211 ISNWIWFTCFGIPLFSVMFLCFLFFSLLSYfnfpyAILYRRLCRGLMWYLLYPFGQ 266
                 68************************998899999********************6 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.024
        YccF   5 lWlllfGwwlaliyllaglllfitiigipygrvlfkla 42 
                 ++  +f +++    ll+++++++ i+ ip +r l+ l 
  EPX74588.1 330 IYYTFFYLLITPSLLLVSAICMFSIFFIPCARTLWTLW 367
                 77788888899999*********************986 PP

  == domain 3  score: -4.0 bits;  conditional E-value: 4
        YccF  41 lakyllwP 48 
                 la++ll+P
  EPX74588.1 516 LAGLLLMP 523
                 44445544 PP

  == domain 4  score: -4.1 bits;  conditional E-value: 4
        YccF  17 iyllagl 23 
                 + +++ +
  EPX74588.1 840 CIMICVF 846
                 2222222 PP

  == domain 5  score: -3.3 bits;  conditional E-value: 3.5
        YccF  10 fGwwlaliyllaglllf 26 
                  G +l l+yl++ + ++
  EPX74588.1 861 KGSILVLAYLVSMFGFM 877
                 57888888888877665 PP

>> OSTMP1  Osteopetrosis-associated transmembrane protein 1 precursor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   1.4   6.5e-05      0.29      29     127 ..     582     685 ..     572     695 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 6.5e-05
      OSTMP1  29 CqnCvqeysqlkesyeeiskklnnasesrkCsqsllksdrlqvvltlskaleeiWekakCkeCl.........kkseeslsnetleflkllnetlkCfe 118
                 C++C++ +  l++ +++  +++++ +    C+  ll s+ + + +tl +++ +iWe+ + +e           +++e++  +e  +  ++  e l+C  
  EPX74588.1 582 CKTCTKRFVLLNDDFYQ--ERIRPFTYI--CAVLLLLSYAIGLWFTLRTHAAHIWENINVNEASiiltkpednNNEENHNDHEDNDAESTSREPLECSA 676
                 9**********999998..777775555..*****************************9997668999997444444444455667778888999999 PP

      OSTMP1 119 kylqkdees 127
                 +y++ d++s
  EPX74588.1 677 DYTSSDTSS 685
                 999876655 PP

>> FAM176  FAM176 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   9.7e-05      0.43      22     104 ..     608     689 ..     601     704 .. 0.59

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 9.7e-05
      FAM176  22 aaLlFvlgvcvGLlltLcllviriscrkdlerlkkkkkklkeesekasededeeeeeeeedsseseaeeelsefertlsvnvf 104
                 +a l +l+ ++GL +tL    ++i  + ++++ +   +k +++++++++++ e+++ e+++ +  e + + ++++ + s++ f
  EPX74588.1 608 CAVLLLLSYAIGLWFTLRTHAAHIWENINVNEASIILTKPEDNNNEENHNDHEDNDAESTSREPLECSADYTSSDTS-SIQEF 689
                 688899999**********9999988888886666655555544333222222222222222222222222222222.44444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (881 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       895  (0.0499191); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.71u 0.27s 00:00:00.98 Elapsed: 00:00:00.44
# Mc/sec: 5984.23
//
Query:       EPX74589.1  [L=200]
Description: 40S ribosomal protein S8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      1e-57  194.2   0.7    1.1e-57  194.0   0.7    1.0  1  Ribosomal_S8e  Ribosomal protein S8e


Domain annotation for each model (and alignments):
>> Ribosomal_S8e  Ribosomal protein S8e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  194.0   0.7   6.4e-62   1.1e-57       1     137 []       1     184 [.       1     184 [. 1.00

  Alignments for each domain:
  == domain 1  score: 194.0 bits;  conditional E-value: 6.4e-62
                    XXXBXXCCCSEESSTEEXXXSSXXXCCSBXXXXXXXEESSHEEEEEEETTCEEEEEEESESEEEEEETTTTEEEEEEEEEEECSSSTCHHHHTTC- CS
  Ribosomal_S8e   1 mgisrdskhkrkltGgkakllrkkrkielgrkekatklgaervkvvrvrgGkrkkralrlkkanvthpeekvtkklkIlgVkknpsnneyvrlgvl 96 
                    mgi+rds+hkr+++G+k++++rkkrk+elgr++++t++ga+r+++vrvrgG++k+ralrl+++n+++++e+v+kk++I++V ++psnne+vr+++l
     EPX74589.1   1 MGITRDSRHKRSASGAKRAQYRKKRKFELGRQAANTRIGAKRIHEVRVRGGNQKFRALRLESGNFSWGSEGVAKKTRIIQVAYHPSNNELVRTNTL 96 
                    99********************************************************************************************** PP

                    -TTEEEEEESHH...............................................HHHHHHTTEEEEEEESEHHHHSSEEEEEE CS
  Ribosomal_S8e  97 tKgaiievdvse...............................................LgevtqsgkvvAqvtsrPgqdGcvnavlL 137
                    tK+ai++vd+++                                               +++++++g+++A+v+srPgq+G++++++L
     EPX74589.1  97 TKSAIVQVDAAPfrvwyethygilmggkgkkatptatpkskhvqrklgarvgsskvdpaMESQFAAGRLYACVSSRPGQSGRCDGYIL 184
                    ***************************************************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       418  (0.0233142); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.29s 00:00:00.71 Elapsed: 00:00:00.45
# Mc/sec: 1339.06
//
Query:       EPX74590.1  [L=1211]
Description: RNA polymerase II complex subunit Rpb2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     5e-126  420.9   0.3   9.1e-126  420.0   0.3    1.4  1  RNA_pol_Rpb2_6   RNA polymerase Rpb2, domain 6
    6.4e-76  254.4   0.0    9.3e-76  253.9   0.0    1.2  1  RNA_pol_Rpb2_1   RNA polymerase beta subunit
    7.1e-53  179.1   0.3    1.4e-52  178.1   0.0    1.6  2  RNA_pol_Rpb2_2   RNA polymerase Rpb2, domain 2
    5.9e-31  106.7   0.1    1.6e-30  105.4   0.1    1.8  1  RNA_pol_Rpb2_7   RNA polymerase Rpb2, domain 7
    1.4e-25   89.4   0.7    3.1e-25   88.2   0.2    1.9  2  RNA_pol_Rpb2_4   RNA polymerase Rpb2, domain 4
    2.4e-25   88.5   0.0    6.3e-25   87.2   0.0    1.8  1  RNA_pol_Rpb2_3   RNA polymerase Rpb2, domain 3
    5.9e-24   84.4   0.6    5.9e-24   84.4   0.6    2.0  2  RNA_pol_Rpb2_5   RNA polymerase Rpb2, domain 5
  ------ inclusion threshold ------
      0.021   15.1   0.7       0.57   10.5   0.2    2.9  3  RNA_pol_Rpb2_45  RNA polymerase beta subunit external 1 domai


Domain annotation for each model (and alignments):
>> RNA_pol_Rpb2_6  RNA polymerase Rpb2, domain 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  420.0   0.3  4.1e-129  9.1e-126       1     390 []     741    1113 ..     741    1113 .. 0.94

  Alignments for each domain:
  == domain 1  score: 420.0 bits;  conditional E-value: 4.1e-129
                      HHHT-SS-TTB-HHHHHHHHHHGGGB-S---TTTTT---SSEEEESS----SSB-S.TTTTTS........GGGS-SEEEEEBBBS--TTTTT CS
  RNA_pol_Rpb2_6    1 vaklapvvehvqspriiiqaamekqalgiyslnkfkrsnqktyllcinqkPlvktgdkveagqvldgpatekgelalGqnavVAvmsyeGYni 93  
                      +a+++p+++h+qspr+++q+am+kqa+g+y +n+  r+++  ++l+++qkPl +t+ ++e+++        + el++Gqna+VA+++y+GYn+
      EPX74590.1  741 LASIIPFPDHNQSPRNTYQSAMGKQAMGVYLTNYQVRMDTMANILYYPQKPLATTR-SMEYLK--------FRELPAGQNAIVAILCYSGYNQ 824 
                      5899****************************************************.******........********************** PP

                      TT-EEEBCHHHHTTTT-EEEEEE..EEE--SSSS-.--.-S--..-.....-SS-GGGS-TTSB--SS-EEETT-EEE---..B-----...- CS
  RNA_pol_Rpb2_6   94 EDaiilnerlvdrdvftsihikeyeveardtklge.eeitrdipnv.....seealkkLdedGivrvgaevkegdilvgkvtkgeteltpeek 180 
                      ED+ii+n++++dr++f+si++++y+ + ++   +  ee+ r   ++     ++  ++kL++dG++ +g++v+ +di++gk+   +  + +ee 
      EPX74590.1  825 EDSIIMNQASIDRGLFRSIFYRTYTDQEKKIGMTVmEEFERPA-RSttlrmKHGTYDKLEDDGLIAPGTRVSGDDIIIGKT--APIPVDNEEM 914 
                      ***********************66666555555546654444.4458889999**************************8..7777776666 PP

                      ----------..-B---EE--TT-EEEEEEEEE.......EE-TT--EEEEEEEEEEE---TT-BEEETTS---BBEEEB-TTTSEEETTS-- CS
  RNA_pol_Rpb2_6  181 llraifgekarevkdtslrvksgeegvVdkvkvfsrekgdelkagvnklvkvyvaqkRklqvGDKfasrhGqKGvvslilpqeDmPfledGiv 273 
                        r++  +k    +d s+ ++s+e+g+Vd+v v       ++++++ k+vkv+++++R +q+GDKfasrhGqKG++++++++eDmPf ++G+v
      EPX74590.1  915 GQRTQLHAK----RDVSTPLRSTESGIVDQVLV-------TTNQEGLKFVKVRMRSTRVPQIGDKFASRHGQKGTIGMTYRHEDMPFSAQGVV 996 
                      665555444....78999***************.......8999************************************************* PP

                      -SEEE-GGGCHHH-BTTHHHHHHHHHCCCSSSS--B--TT-...-HHHHHHHHHTTS-TT-EE-EEETTTS-B-SS-EEB-EEEEEEBS--CC CS
  RNA_pol_Rpb2_6  274 vDivlNPlgvPSRmtigqllEtllgkaaalegkkvdatvFdgakeeeikelLeeagleasGkevlydGrtGekleaeifvGviYylkLkhlve 366 
                      +D+++NP+++PSRmt+++l+E+ l+k++al+g++ dat+F+  + e++++lL+++g++++G ev+y G tG+kl +++f+G++Yy++Lkhlv+
      EPX74590.1  997 PDVIINPHAIPSRMTVAHLIECQLSKVSALSGFEGDATPFTDVTVEAVSKLLRSHGFQSRGFEVMYHGHTGRKLVSQVFLGPTYYQRLKHLVD 1089
                      *****************************************9999************************************************ PP

                      CS----SS--B-TTT--B-SCGGG CS
  RNA_pol_Rpb2_6  367 dKihaRstGpyslltqQPlgGkaq 390 
                      dKihaR++Gp++ lt+QP++G+++
      EPX74590.1 1090 DKIHARARGPVQILTRQPVEGRSR 1113
                      **********************86 PP

>> RNA_pol_Rpb2_1  RNA polymerase beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  253.9   0.0   4.2e-79   9.3e-76       2     203 .]      30     441 ..      29     441 .. 0.99

  Alignments for each domain:
  == domain 1  score: 253.9 bits;  conditional E-value: 4.2e-79
                     TTHHHHHHHHHHHHTHHHHHCTTSSECCHCSSSHCSSSC......EEEEEEEEEEESCSSECTTSCEEES.HHHHHHCTSBXEEEEEEEEEEEEC CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  RNA_pol_Rpb2_1   2 LvsqqldSFnkfveqdlekiikeeaaieseeeiqssgee......lelkfvsirlgkPvvdesdasereiyPkearlrnltYsaplyvklklvvy 90 
                     L++qql SF++fv++++++i+++++++++++ +q++g++      +e++f++i+l++P+++e+d+s+++++P+earlrnltYs+plyv+++++v+
      EPX74590.1  30 LARQQLFSFDEFVQNTMQEIVDDDSTLTLDQYAQHTGAQgdvtrrYEINFGQIYLSRPTMTEADGSTTTMFPQEARLRNLTYSSPLYVDMRKKVM 124
                     899***********************************9******************************************************99 PP

                     CCC.............TCCEEEEEEEEEEEEEXBTTSTTSSSTTS.HHHHHHTTS.TTS..SSEEETTCEEEEXEEEE................. CS
                     xxx.............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................. RF
  RNA_pol_Rpb2_1  91 ekd.............nkeeikeeevyiGelPlMlrskacvlseaseeelvelkEcpldqGGyFiinGtekvivaqek................. 155
                      ++             ++e++++++v+iG++P+Mlrs++c+l+++s+ el++l+Ecp+dqGGyFiinG+ekvi+aqe+                 
      EPX74590.1 125 VAAdsnvpigeeewlvEEEDEDPSKVFIGKIPIMLRSTFCILNGVSDAELYDLNECPYDQGGYFIINGSEKVIIAQERsaanivqvfrkaapspi 219
                     8878******************************************************************************************* PP

                     ............................................................................................... CS
                     ............................................................................................... RF
  RNA_pol_Rpb2_1 156 ............................................................................................... 155
                                                                                                                    
      EPX74590.1 220 alvaeirsavergsrlissmqiklmarnaensgqtiratlpyirsdipivivfralgvvpdrdilehicydpndlqmlemmkpcieeafviqdkd 314
                     *********************************************************************************************** PP

                     ...............................................................................XHHHHHHHHHHHHHHH CS
                     ...............................................................................xxxxxxxxxxxxxxxx RF
  RNA_pol_Rpb2_1 156 ...............................................................................laGeLlaslfrvllkk 171
                                                                                                    laG+Llaslfr+l++k
      EPX74590.1 315 ialdfigkrgsttgvtrekrlryahdilqkellphittmegfetrkafflgyminrmllcalerrepddrdhfgrkrldLAGPLLASLFRMLFRK 409
                     *********************************************************************************************** PP

                     HHHHHHHHHHHHHCTSSSSSHHHHSCSHHHHH CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  RNA_pol_Rpb2_1 172 lerdvkerlqksleklddlmlqllvnakpita 203
                     ++rdv++++qk++e++++++l+l+v++++it+
      EPX74590.1 410 MTRDVYKYMQKCVETNREFNLTLAVKSNTITN 441
                     ******************************95 PP

>> RNA_pol_Rpb2_2  RNA polymerase Rpb2, domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.1       3.8   8.5e+03      92     108 ..       7      23 ..       4      34 .. 0.75
   2 !  178.1   0.0   6.1e-56   1.4e-52       2     190 .]     205     393 ..     204     393 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 3.8
                     HHCTSSSCHHHHHHHHH CS
  RNA_pol_Rpb2_2  92 ekeeiqtqeealdyigk 108
                     +++e  tqe+++  i +
      EPX74590.1   7 QYNETLTQEDCWTVISS 23 
                     789999******99987 PP

  == domain 2  score: 178.1 bits;  conditional E-value: 6.1e-56
                     TSCEEEEE-SSSSSE...........SSSCCEECCCEEEEECCCCSTSCEEEEECTTSSSEEEHHHHHHHTT--STTHHHHHHTSSSTTHHHHHH CS
  RNA_pol_Rpb2_2   2 sngiyvekekdknki...........satvtsslisqrgsvlklekdgktliwtriskkrkipivivlkAlglvsdreIlericydsedsqllee 85 
                      n+++v+++++++ i           +++  +s+++ + +  + e++g+t+++t+++++++ipiviv++Alg+v dr+Ile+icyd++d q+le+
      EPX74590.1 205 ANIVQVFRKAAPSPIalvaeirsaveRGSRLISSMQIKLMARNAENSGQTIRATLPYIRSDIPIVIVFRALGVVPDRDILEHICYDPNDLQMLEM 299
                     69999*****************9999888888888889999****************************************************** PP

                     HHHHHHHHCTSSSCHHHHHHHHHCSSTTSSSCCCCCHHHHHHHCHHHHHHHTTTTSSTTTTTSSSTCHH..HHHHHHHHHHHHHHHHTTSSSS-- CS
  RNA_pol_Rpb2_2  86 lleeleekeeiqtqeealdyigkvvalrrgeearlqsareilqkrydlgeigreklnkhlglseslenkrlkaqdilymidrLlslklgrrevDD 180
                     ++++ ee+++iq+++ ald+igk     rg+++ +++++++   ry+++++++e l+ h++++e +e++  ka++++ymi+r+l+++l+rre+DD
      EPX74590.1 300 MKPCIEEAFVIQDKDIALDFIGK-----RGSTTGVTREKRL---RYAHDILQKELLP-HITTMEGFETR--KAFFLGYMINRMLLCALERREPDD 383
                     **********************9.....6777777777766...67777778*****.***********..************************ PP

                     TTSGGGEEEE CS
  RNA_pol_Rpb2_2 181 iDhlgnkRvr 190
                     +Dh+g kR++
      EPX74590.1 384 RDHFGRKRLD 393
                     ********96 PP

>> RNA_pol_Rpb2_7  RNA polymerase Rpb2, domain 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.4   0.1     7e-34   1.6e-30       1      86 [.    1115    1206 ..    1115    1207 .. 0.98

  Alignments for each domain:
  == domain 1  score: 105.4 bits;  conditional E-value: 7e-34
                      BBEEEEHHHHHHHHHHTBHHHHHHHHTTTTTEEEEEEESSSSSCCCEE......EBTTTTCSSSEEEEEEEHHHHHHHHHHHHTTBEEEEES CS
  RNA_pol_Rpb2_7    1 GGlrfGEMErdaliayGaaalLkerltikSDavevdvcgrckllaaan......eCkivkseekiekveipeafklLlqeLqslgialklll 86  
                      GGlrfGEMErd+ i++G++++++erl++ SDa++v vc+ c+l+a+a+      eC+ ++++++++++++p+a+klL+qeL+s++ia++l++
      EPX74590.1 1115 GGLRFGEMERDCQISHGCSSVMRERLFDCSDAYRVVVCDLCGLVAIASykknsyECRSCQNRTRFSQIYLPYAAKLLFQELMSMNIAPRLFT 1206
                      9*********************************************9899***************************************987 PP

>> RNA_pol_Rpb2_4  RNA polymerase Rpb2, domain 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       7.2   1.6e+04      15      28 ..     472     485 ..     467     488 .. 0.82
   2 !   88.2   0.2   1.4e-28   3.1e-25       1      62 []     566     627 ..     566     627 .. 0.99

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 7.2
                     CCHHHHHHHHCCTT CS
  RNA_pol_Rpb2_4  15 kklvetlRelRRkg 28 
                       +++tl +lRR++
      EPX74590.1 472 YTFASTLSHLRRTN 485
                     678999******86 PP

  == domain 2  score: 88.2 bits;  conditional E-value: 1.4e-28
                     EECTT-BEEE-S-HCCHHHHHHHHCCTTSS-TT-EEEE-TTT--EEEE-SSEEB-EEEEE-S CS
  RNA_pol_Rpb2_4   1 VfvNGrllGvtrdpkklvetlRelRRkgkiseevsivlnekqkevkiatDgGRvcRPliiVe 62 
                     VfvNG++lGv+rdp++l++tlR+lRR+ +is evsiv+++++ke++++tD+GR+cRPl+iV+
      EPX74590.1 566 VFVNGVWLGVHRDPAHLTDTLRSLRRRLDISAEVSIVRDIREKELRLFTDAGRICRPLFIVD 627
                     9***********************************************************95 PP

>> RNA_pol_Rpb2_3  RNA polymerase Rpb2, domain 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.2   0.0   2.8e-28   6.3e-25       1      68 []     467     531 ..     467     531 .. 0.98

  Alignments for each domain:
  == domain 1  score: 87.2 bits;  conditional E-value: 2.8e-28
  RNA_pol_Rpb2_3   1 qvldrlnplselshlrrvsslrgglskerkttevRdlhpshwGriCpveTPEGencGlvksLallarv 68 
                     qvl+r+++ s+lshlrr +++   + ++ k +++R+lh++hwG++Cp+eTPEG+ cGlvk+Lal+++v
      EPX74590.1 467 QVLNRYTFASTLSHLRRTNTP---IGRDGKLAKPRQLHNTHWGMVCPAETPEGQACGLVKNLALMSYV 531
                     89*******************...*****************************************987 PP

>> RNA_pol_Rpb2_5  RNA polymerase Rpb2, domain 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1       5.4   1.2e+04      23      36 ..     287     300 ..     286     313 .. 0.82
   2 !   84.4   0.6   2.6e-27   5.9e-24       1      58 []     665     734 ..     665     734 .. 0.97

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 5.4
                     EESSTTTCSST-SS CS
  RNA_pol_Rpb2_5  23 Iamtpedleksree 36 
                     I+ +p+dl++ +++
      EPX74590.1 287 ICYDPNDLQMLEMM 300
                     99******988554 PP

  == domain 2  score: 84.4 bits;  conditional E-value: 2.6e-27
                     HHHHHHTTSEEEEEHHHHTT--EESSTTTCSST-SSTTTSS-............-TTSSSST-SEEES-G CS
  RNA_pol_Rpb2_5   1 wddLlregvvEylDaeEEetamIamtpedleksreekealee............kenskshtyTHcEIhP 58 
                     w+ L+++g++EylDaeEEet+mIamtpedle+sr++++++e             ++n+++htyTHcEIhP
      EPX74590.1 665 WTALVSSGLIEYLDAEEEETVMIAMTPEDLEASRQMNAGYEVkeeldpaqrvkpAPNPHVHTYTHCEIHP 734
                     99*******************************99999988899**********9**************9 PP

>> RNA_pol_Rpb2_45  RNA polymerase beta subunit external 1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       4.9   1.1e+04      23      41 ..     124     142 ..     122     143 .. 0.84
   2 ?   10.5   0.2   0.00025      0.57      12      36 ..     674     698 ..     666     709 .. 0.85
   3 ?    1.3   0.0      0.19   4.4e+02      36      59 ..    1085    1108 ..    1079    1109 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 4.9
                      SEEE-SSS-BETTSCBSSS CS
  RNA_pol_Rpb2_45  23 yviAqAnapldeegrfvee 41 
                      +v A +n+p+ ee+ +vee
       EPX74590.1 124 MVAADSNVPIGEEEWLVEE 142
                      678999****999999876 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00025
                      EEEEEHHHHTTSEEE-SSS-BETTS CS
  RNA_pol_Rpb2_45  12 vvYLtAdeEekyviAqAnapldeeg 36 
                      ++YL A+eEe  +iA   + l+++ 
       EPX74590.1 674 IEYLDAEEEETVMIAMTPEDLEASR 698
                      89*************9999888765 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.19
                       SCBSSSEEEEECSSCEEEEEGGG- CS
  RNA_pol_Rpb2_45   36 grfveerVlaRrkgevelvepeeV 59  
                       +++v+++++aR +g v++ +++ V
       EPX74590.1 1085 KHLVDDKIHARARGPVQILTRQPV 1108
                       6899**********9999988766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1211 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       507  (0.0282782); expected 358.6 (0.02)
Passed bias filter:                      474  (0.0264376); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.80u 0.29s 00:00:01.09 Elapsed: 00:00:00.46
# Mc/sec: 7901.89
//
Query:       EPX74591.1  [L=4906]
Description: ferrichrome synthetase Sib1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   8.4e-164  545.6  19.7    7.5e-34  117.2   0.0    7.3  7  Condensation   Condensation domain
   1.2e-159  531.5   0.0    1.3e-79  267.8   0.0    4.2  4  AMP-binding    AMP-binding enzyme
    3.1e-41  139.5  15.0    3.4e-08   33.7   0.6    6.7  6  PP-binding     Phosphopantetheine attachment site
     0.0041   15.8   0.2        5.2    5.6   0.0    4.1  5  Transferase    Transferase family
     0.0097   16.9   0.0       0.52   11.3   0.0    3.2  3  AMP-binding_C  AMP-binding enzyme C-terminal domain


Domain annotation for each model (and alignments):
>> Condensation  Condensation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.4   5.1     2e-34   7.2e-31       7     439 ..     812    1197 ..     807    1207 .. 0.83
   2 !   84.8   0.0   1.4e-27   5.2e-24       2     366 ..    1329    1662 ..    1328    1698 .. 0.80
   3 !   57.6   0.2   2.4e-19   8.6e-16      56     365 ..    2328    2621 ..    2300    2693 .. 0.70
   4 !   11.6   0.0   2.3e-05     0.081      17      77 ..    3360    3419 ..    3345    3438 .. 0.81
   5 !   59.6   0.1   6.3e-20   2.2e-16     128     440 ..    3445    3726 ..    3428    3733 .. 0.83
   6 !  117.2   0.0   2.1e-37   7.5e-34       2     357 ..    3855    4181 ..    3854    4224 .. 0.81
   7 !  111.1   0.0   1.5e-35   5.4e-32       3     320 ..    4490    4789 ..    4488    4840 .. 0.83

  Alignments for each domain:
  == domain 1  score: 107.4 bits;  conditional E-value: 2e-34
                    XXCCHHHHHHHHHHSSSSSTTEEEEEEEEES---HHHHHHHHHHHHHH-SSCCEEEEE..TTEEEEEE-TT-----EEEE-T..TSSSHHHHHHH CS
  Condensation    7 lspaQkrmwflekleeessaynmqavlklegeldlerlekalqelierhdaLRtvfleeengepvQvileerevelevleisdleeseeeeaiee 101 
                     +++Qk+m++ + ++ + + y+   vlk++  +d   +ek++ ++++ h+ LR +f  ++++ +++++++e++  l + e     +++  ++ e+
    EPX74591.1  812 CTDLQKGMLYESLIN-NGEVYVNHDVLKINAPVD--EVEKSWLQVLRCHPLLRSSFHLDDKQGFILRVHQEASPILTYSEHP--FTQT-LNHFEN 900 
                    5899*****988888.889999999999877765..6*******************99*9*********6666555444333..2222.233444 PP

                    HHHHHHTC--SCCCS-SEEEEEEESSTTEEEEEEEEECCT--TTTHHHHHHHHHHHHHHHHTT-------S--HHHHHHHHHHHHCSHHHHHHHH CS
  Condensation  102 faqkdlqepfdLekgpLfraalfkiaenrlllllsvHHiivDGvSlgillrdlaklYqqlekgeelplpqktpYkdyaeweqqyleskdlekeea 196 
                    f      e+f L++gpL  a ++  ++++ +l +  HH + DG+Sl ++ ++l  l     k+++lp    +++ +y+ +   + +++ +e++  
    EPX74591.1  901 FSF---TEEF-LSRGPL-DARIIY-NSSECYLSIIWHHALYDGWSLDVIRQQLELLL----KKKPLPI--YSQFVEYVRE-LHFTKQRSMEENMH 982 
                    444...4566.888887.556665.699*************************9888....8888766..6669999999.66799999****** PP

                    HHHHHHH......S---BSS---SS---S-EEEEEEEE-S-HHHHHHHHSTSS-HHHHHHHHHHHHHHHHHT-SEEEEEEEEESSTT.CSTCHHC CS
  Condensation  197 YWseqlegelpvlqLpkdkarpakrsfkadrlsikldeeteeklrklakeqgvtlndvllaalgllLskytgqddivvgteisgRes.eikdier 290 
                    +W+++l+g          k+++ k+++k+++ ++   +   + + + +k+  +t  + ll+a+++++sk t+  d+ +gt+isgR + +i++i++
    EPX74591.1  983 FWKDYLKG---------SKTKSLKQKTKNSSSVFGETKLKSAHIDDYCKSLRITPLSFLLTAWSAVMSKHTECLDMLIGTVISGRMNnSIENIDQ 1068
                    *******9.........34677777888788888888888899******************************************998889**** PP

                    --SS-EEEEEEEEE--TT-BHHHHHHHHHHHHHHHHCCTTS-HHHHHHCSS.SS-SSSS-S-SEEEEESSS-HHCCCEEECCCCSEEECEE...E CS
  Condensation  291 mvGlFvntlPlridvkeaktfselikrvkedllkaephqgypleeLvkdlelqrkesrspLfdpvfsfenylgqeseeeesqlselklsvssvea 385 
                    +vG    tlP+ri ++e+ t +++ +++   l ++++h ++ l ++++  e++ +      +++ + ++      s  +  +     +s      
    EPX74591.1 1069 IVGPCMRTLPVRIVLSEQLTHQQICQNTLSSLTSILDHTSVSLADIQDFHENPVQ------LNSLLILQQ-----STVTLDDSIVTSIS-----S 1147
                    **********************************************999998886......667777744.....33333333333333.....3 PP

                    .....SSEEEEEEETTSSEEEEEEEETTTS-HHHHHHHHHHHHHHHHHHHHSTT CS
  Condensation  386 eeeskydlsleasetngkltikieYntslFdeetierflerlkelleqviehpe 439 
                     ++++y l +e+   +++ +iki   t  F++e++e++   l++ ++++i h +
    EPX74591.1 1148 TNKTEYPLLVEVER-HENYRIKI---TGKFENEFLETLVHDLQNSINKTILHAD 1197
                    6799******9988.99999999...9999999999999999999999998876 PP

  == domain 2  score: 84.8 bits;  conditional E-value: 1.4e-27
                    EEEEEXXCCHHHHHHHHHHSSSSSTTEEEEEEEEES---HHHHHHHHHHHHHH-SSCCEEEEE....TTEEEEEE-TT-----EEEE-T..TSSS CS
  Condensation    2 qdeyplspaQkrmwflekleeessaynmqavlklegeldlerlekalqelierhdaLRtvfle..eengepvQvileerevelevleisdleese 94  
                    +d+ p sp+Q  +  l   e++  ++     l   g   ++++ + + +l+++ ++LRt f      +    Qvil+++++    +e     +s 
    EPX74591.1 1329 EDVFPCSPMQ--LALLTSTEKNGMHFYYNKFLFDIGDHSSSTVLDIFGKLTQMFPILRTCFYLtrSSKYPYCQVILKNSNFGY--EE-----ASY 1414
                    788999****..66666666666665555555557888999999****************977313455568*******9999..33.....334 PP

                    HHHHHHHHHHHHHTC--S.CCCS.-SEEEEEEESSTTEEEEEEEEECCT--TTTHHHHHHHHHHHHHHHHTT-------S--HHHHHHHHHHHHC CS
  Condensation   95 eeeaieefaqkdlqepfd.Lekg.pLfraalfkiaenrlllllsvHHiivDGvSlgillrdlaklYqqlekgeelplpqktpYkdyaeweqqyle 187 
                     ++++ ++  +    p   +++g  ++r + ++   ++ +ll+ +HH++ D++S++i++ +lakl    + ++ + +p++ pY +y    +    
    EPX74591.1 1415 LDNHLTSYNVE----PVPvVDSGkVPLRLQFLS-GYRKNYLLIYMHHTLYDAWSFRIIFDQLAKLS---RAEQLTVSPSMRPYIEYLHLTN---- 1497
                    44455555553....5551455589********.9******************************9...8888899999999**9998832.... PP

                    SHHHHHHHHHHHHHHH......S---BSS---SS---S-EEEEEEEE-S-HHHHHHHHSTSS-HHHHHHHHHHHHHHHHHT-SEEEEEEEEESST CS
  Condensation  188 skdlekeeaYWseqlegelpvlqLpkdkarpakrsfkadrlsikldeeteeklrklakeqgvtlndvllaalgllLskytgqddivvgteisgRe 282 
                        e++   W+ +++++ p + +p+  ++ +k+s+  +r+ ++       klr++++++ v+  + l+ +++ +Ls +tg++d+ +g ++sgR+
    EPX74591.1 1498 ---DETKMLTWKRIFDNFKP-VPFPRGMTSDKKESYV-KRVPLDY-----LKLRNICSQNLVSTSSFLQVCWAKTLSLITGSKDVCFGNVVSGRN 1582
                    ...2456667******9777.8999999999999999.7777776.....99******************************************* PP

                    TCSTCHHC--SS-EEEEEEEEE--TT-.BHH..HHHHHHHHHHHHHHCCTTS-HHHHHHCSS.SS-SSSS-S-SEEEEESSS-HH.CC CS
  Condensation  283 seikdiermvGlFvntlPlridvkeak.tfs..elikrvkedllkaephqgypleeLvkdlelqrkesrspLfdpvfsfenylgq.es 366 
                     +++++++  G   n +Plr+  ++++ +f   + ++++k+  ++ e ++ ++ ++L   le+  +    p+fd++f ++n  g+ es
    EPX74591.1 1583 IPVNGVDSLAGPTFNSVPLRVLFSDDDnQFIpiQRLESLKKLTKNLELNSAIDIGKL---LEVSAN---VPMFDTIFIIQN--GSfES 1662
                    *********************998888466688999999999999999999999999...444444...69**********..33333 PP

  == domain 3  score: 57.6 bits;  conditional E-value: 2.4e-19
                    SSCCEEEEE....TTEEEEEE-TT-----EEEE-T..TSSSHHHHHHHHHHHHHTC--SCCCS-SEEEEEEESSTTEEEEEEEEECCT--TTTHH CS
  Condensation   56 daLRtvfle..eengepvQvileerevelevleisdleeseeeeaieefaqkdlqepfdLekgpLfraalfkiaenrlllllsvHHiivDGvSlg 148 
                      LRt f+   + +  + Qv le+ + ++++ e    ++ e e+a++ ++ + +q  +   + ++   + ++ ++n+ +++l +HH i+D  Sl+
    EPX74591.1 2328 SMLRTYFVSisNPQSPFAQVTLENINPPWHLRE----QMIEVEDAVSIALDNLKQALLSDITTIPYTLSFIRTNKNENYFILVMHHAIFDERSLN 2418
                    566666666322334445666666666663322....2333334444444433333444445688889999**********************99 PP

                    HHHHHHHHHHHHHHTT-------S--HHHHHHHHHHHHCSHHHHHHHHHHHHHHH......S---BSS---SS---S-EEEEEE..EE-S-HHHH CS
  Condensation  149 illrdlaklYqqlekgeelplpqktpYkdyaeweqqyleskdlekeeaYWseqlegelpvlqLpkdkarpakrsfkadrlsikl..deeteeklr 241 
                      lr   ++    e++++lp+ +          ++  + + + ++++a+W + leg+ p l +p+       ++++ d  si+   ++   +k++
    EPX74591.1 2419 HTLRIVEHAL---ESENKLPSHEAI-------TKKILAYKLRSNESKAFWINNLEGFTP-LLFPNL----CANRYSSDARSITTkpSSLDISKFK 2498
                    8888877776...555555553332.......22333444555799**********877.556666....4455555555666544777889*** PP

                    HHHHSTSS-HHHHHHHHHHHHHHHHHT-SEEEEEEEEESSTT.CSTCHHC--SS-EEEEEEEEE--TT-BHHHHHHHHHHHHHHHHCCTTS-HHH CS
  Condensation  242 klakeqgvtlndvllaalgllLskytgqddivvgteisgRes.eikdiermvGlFvntlPlridvkeaktfselikrvkedllkaephqgyplee 335 
                    +++ + +++++++ + a++ lLs y+++d i +g++ sg +  e  d ++++   + t+P+ ++v++  + s l+k+++e+ +  ++hq++pl  
    EPX74591.1 2499 EVCGKFNISIQTLAQLAWAKLLSSYCSEDCITFGLILSGQTLiE--DESDAIFPTLATIPFAVNVSG--SVSGLLKDIQEKNKGYLKHQYTPLSH 2589
                    *****************************************977..*******************55..56************************ PP

                    HHHCSS.SS-SSSS-S-SEEEEESSS-HH.....C CS
  Condensation  336 LvkdlelqrkesrspLfdpvfsfenylgq.....e 365 
                    +++ l+l  +   +  fd+ +s ++ +       +
    EPX74591.1 2590 IKRWLNLGGN---ETYFDSLLSVQVEDDTiiplkM 2621
                    ******9998...689*******993333333320 PP

  == domain 4  score: 11.6 bits;  conditional E-value: 2.3e-05
                    HHHHSSSSSTTEEEEEEEEES---HHHHHHHHHHHHHH-SSCCEEEEE..TTEEEEEE-TT CS
  Condensation   17 lekleeessaynmqavlklegeldlerlekalqelierhdaLRtvfleeengepvQvilee 77  
                    +e   ++ s y+ ++++k++ e + +++e+ l+++i++ ++LR +f++  +   +Qvi++ 
    EPX74591.1 3360 FELERGRRSLYFNTFTFKFHNEEQAKLFENDLKHFIKKVEVLRSSFIKS-EYGYFQVIWKP 3419
                    4555678999************************************877.88899999853 PP

  == domain 5  score: 59.6 bits;  conditional E-value: 6.3e-20
                    TTEEEEEEEEECCT--TTTHHHHHHHHHHHHHHHHTT-------S--.HHHHHHHHHHHHCSHHHHHHHHHHHHHHH......S---BSS---SS CS
  Condensation  128 enrlllllsvHHiivDGvSlgillrdlaklYqqlekgeelplpqktp.YkdyaeweqqyleskdlekeeaYWseqlegelpvlqLpkdkarpakr 221 
                    +  +++ l++ H + DG+Sl i+l+dla++     + +elp+    p Y++ + +   +l++    +++++Ws+++++   v +Lp+ ++ +++ 
    EPX74591.1 3445 NGIHHISLELFHGVYDGWSLDIILNDLARFS----QTRELPE---RPlYSSAVLE---VLNQSSKLDHASFWSKLFRN--GVSKLPQFSDGLPEP 3527
                    55688889999******************99....5555444...5557765555...8999999************9..7778***97777777 PP

                    ---S-EEEEEEEE-S-HHHHHHHHST.SS-HHHHHHHHHHHHHHHHHT-SEEEEEEEEESSTTCSTCHHC--SS-EEEEEEEEE--TT-BHHHHH CS
  Condensation  222 sfkadrlsikldeeteeklrklakeq.gvtlndvllaalgllLskytgqddivvgteisgReseikdiermvGlFvntlPlridvkeaktfseli 315 
                     +  ++ls++       +l+++++++ ++ + +++l+a+  +L    +   + vgt++sgR ++ ++  +++G   nt+P+   ++ + +f el+
    EPX74591.1 3528 MVFSHKLSMSN-----LRLQSICRSYfKTPVSSLFLTAWLCFLNS--HFLVTTVGTVVSGRSNQ-INHLDVIGPMFNTVPFPFFIDSESSFEELV 3614
                    66656666554.....79999999986899*************85..667789**********9.88899************************* PP

                    HHHHHHHHHHHCCTTS-HHHHHHCSS.SS-SSSS-S-SEEEEESSS-HHCCCEEECCCCSEEECEE...E.....SSEEEEEEE.TTSSEEEEEE CS
  Condensation  316 krvkedllkaephqgypleeLvkdlelqrkesrspLfdpvfsfenylgqeseeeesqlselklsvssveaeeeskydlslease.tngkltikie 409 
                    ++++  l +++p   + l e++k l+l+       Lf++ f++     + ++ +  q+   +++++    ++ +++ l++e+ + ++++l i+++
    EPX74591.1 3615 SSTQSVLSSMLPFHHTSLREVKKCLQLKD------LFNVLFVYT----HHEKDTPDQKINWDMEIK----STGTEFPLAFEVEKsKDDTLIINLA 3695
                    *********************99999777......9*******3....455555555556666655....4569*********988999999987 PP

                    EETTTS-HHHHHHHHHHHHHHHHHHHHSTTS CS
  Condensation  410 YntslFdeetierflerlkelleqviehpeq 440 
                     + +  +  + + +l +++e  + vi++p++
    EPX74591.1 3696 TSYKYVEGLETSSLLAMFEEYFLTVINEPNT 3726
                    7666667777788888888888888888876 PP

  == domain 6  score: 117.2 bits;  conditional E-value: 2.1e-37
                    EEEEEXXCCHHHHHHHHHHSSSSSTTEEEEEEEEES---HHHHHHHHHHHHHH-SSCCEEEEE.....TTEEEEEE-TT-----EEEE-T..TSS CS
  Condensation    2 qdeyplspaQkrmwflekleeessaynmqavlklegeldlerlekalqelierhdaLRtvflee...engepvQvileerevelevleisdlees 93  
                    +d y  +++Q+++++   ++  ss y  +a+++++ +l++erl++a+ ++i  +++LRt f+     ++  ++Qv++++ +++ e   i++    
    EPX74591.1 3855 EDCYMTTHLQRGLLMETLND--SSLYQNSAIFQID-SLNIERLKEAWVAMIYDNPILRTNFKLTdigNTPAVIQVVEKAPTFDYESHIIKEIFYF 3946
                    678999****8887766555..9**********65.7************************98534466679*******9999999999988888 PP

                    SHHHHHHHHHHHHHTC--SCCCS.-SEEEEEEESSTTEEEEEEEEECCT--TTTHHHHHHHHHHHHHHHHTT-------S--HHHHHHHHHHHHC CS
  Condensation   94 eeeeaieefaqkdlqepfdLekg.pLfraalfkiaenrlllllsvHHiivDGvSlgillrdlaklYqqlekgeelplpqktpYkdyaeweqqyle 187 
                    +e ++++e+++  l+++f    +  + r+  f++ ++++++ +++HH + DG+Sl+++  +l   Y    + e++p+    p+ +++ +      
    EPX74591.1 3947 DELKDAKEYLK--LKRDFPNPFEtCPYRVTFFTV-KDSHYMCVEMHHALYDGWSLSLMYDELLCRY----RHENVPT--RRPFGKFVAQ------ 4026
                    87788999999..78888654443789******5.56677778***********************....7777766..5569999988...... PP

                    SHHHHHHHHHHHHHHH......S.---BSS---SS---S-EEEEEEEE-S-HHHHHHHHSTSS-HHHHHHHHHHHHHHHHHT-SEEEEEEEEESS CS
  Condensation  188 skdlekeeaYWseqlegelpvlq.LpkdkarpakrsfkadrlsikldeeteeklrklakeqgvtlndvllaalgllLskytgqddivvgteisgR 281 
                     +++  + ++Ws++l++ l+v+  L +   ++   ++         ++    kl ++ k +gv+++++   a+g+++s++ +++di+++t++sgR
    EPX74591.1 4027 VNNISYDLEFWSTYLKN-LNVIRpLRRV-GNKGRHTWG-AY-----SSVSYLKLLSASKVYGVSIQSLIFYAWGVYISRLYHSSDIIFHTVFSGR 4113
                    6778899*********8.5555534333.333333333.33.....444557999**************************************** PP

                    TT.CSTCHHC--SS-EEEEEEEEE--TT-BHHHHHHHHHHHHHHHHCCTTS-HHHHHHCSS.SS-SSSS-S-SEEEE CS
  Condensation  282 es.eikdiermvGlFvntlPlridvkeaktfselikrvkedllkaephqgypleeLvkdlelqrkesrspLfdpvfs 357 
                    ++ e  + ++++G   nt+P+ri+++++k   ++++++ ++l +  ++q +pl  + + + l ++      ++++++
    EPX74591.1 4114 TKiE--GADSVLGPCMNTIPVRIKIEDQK---KVLRKLTRELIQLWNQQHTPLSIINSSCPLLQNV----PVQSILV 4181
                    **77..*******************8888...99**********************9999988874....3444444 PP

  == domain 7  score: 111.1 bits;  conditional E-value: 1.5e-35
                    EEEEXXCCHHHHHHHHH.HSSSSSTTEEEEEEEEES---HHHHHHHHHHHHHH-SSCCEEEEE....TTEEEEEE-TT-----EEEE-T..TSSS CS
  Condensation    3 deyplspaQkrmwflek.leeessaynmqavlklegeldlerlekalqelierhdaLRtvflee..engepvQvileerevelevleisdleese 94  
                    d++p sp Q  ++ l+  +++++  y++++    +  +d+erl+ a+q+l++  d+LRt+f++   en +++Qv+  e +++++    s   e++
    EPX74591.1 4490 DILPCSPGQ--LYALSAwYNTNKLKYFTTFLYLTDRMIDIERLKAAWQKLVKSSDILRTTFVKStnENFQILQVLNHEGDIPWQHQTES---EKD 4579
                    778999999..99998724567789***999999***************************9952366677888889999999544444...555 PP

                    HHHHHHHHHHHHHTC--SCCCS-SEEEEEEESSTTEEEEEEEEECCT--TTTHHHHHHHHHHHHHHHHTT-------S--HHHHHHHHHHHHCSH CS
  Condensation   95 eeeaieefaqkdlqepfdLekgpLfraalfkiaenrlllllsvHHiivDGvSlgillrdlaklYqqlekgeelplpqktpYkdyaeweqqylesk 189 
                     e+a  +++++++  +  L++ pL   +++   e +lll +s+HH + DG+S++ill+ l+ lY    + + +p  +++  k+ +    ++++sk
    EPX74591.1 4580 VEAASLALVEEEMYLNTTLNETPLRIRSIII--EGKLLLSISIHHALYDGWSINILLQRLSILY---DNPHLVPIDESS-SKSIVS---KIYNSK 4665
                    5777888999888888999888886666665..8******************************...444444444444.444444...59**** PP

                    HHHHHHHHHHHHHH......S---BSS---SS---S-EEEEEEEE-S-HHHHHHHHSTSS-HHHHHHHHHHHHHHHHHT-SEEEEEEEEESSTTC CS
  Condensation  190 dlekeeaYWseqlegelpvlqLpkdkarpakrsfkadrlsikldeeteeklrklakeqgvtlndvllaalgllLskytgqddivvgteisgRese 284 
                     + +++++Ws+ l+g ++   Lp+       +s ++d +    +   ++ l k a++ +++l++   +a++ +L k+t+q+++ +g+++sgR   
    EPX74591.1 4666 SITSSKSFWSNHLAG-CQPCVLPET----LGDSCNKDIYLYLPSVFDASSLLKKARSMNISLQSMAFTAFACVLNKWTKQNNFTFGVYVSGRSLN 4755
                    **************9.888999999....88999977777777888899999******************************************9 PP

                    STCHHC--SS-EEEEEEEEE--TT-BHHHHHHHHHH CS
  Condensation  285 ikdiermvGlFvntlPlridvkeaktfselikrvke 320 
                    i + ++++    n++Pl ++++e+   s l k++++
    EPX74591.1 4756 IPNADSVLYPLFNVIPLNVNLNES--VSTLAKNIQN 4789
                    99*******************554..4555555554 PP

>> AMP-binding  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  207.2   0.0     9e-65   3.2e-61       8     416 ..     228     618 ..     221     627 .. 0.82
   2 !   30.6   0.0   3.6e-11   1.3e-07      13     105 ..    1769    1862 ..    1760    1893 .. 0.86
   3 !   20.4   0.0   4.5e-08   0.00016     177     307 ..    1910    2025 ..    1908    2034 .. 0.84
   4 !  267.8   0.0   3.7e-83   1.3e-79      10     423 .]    2735    3118 ..    2721    3118 .. 0.85

  Alignments for each domain:
  == domain 1  score: 207.2 bits;  conditional E-value: 9e-65
                  STTSEEEEE.......CCSTEEEEHHHHHHHHHHHHHHHHHTTSSTT-EEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS-HHHHHHHHHHHTESEE CS
  AMP-binding   8 tpdkvalvd.......sgegqtlTYreldervnrlAagLrslGvkkgdrVaillpnspewvvallailkaGavvvplnptltaeelayiledseakvl 98 
                  +p + al +       s + +++T++el++ +  l++ +      ++++V i+ p sp +++a+la+l+ + ++ p++ ++ ++++++i++d++a++ 
   EPX74591.1 228 NPTQEALNFvyshndsSSDSTSFTFQELHSFAFTLSKSIPF----QDKVVPIMIPHSPSLFIAILAVLYSSNAYCPIDVETVSDRVQFICKDTDASLA 321
                  55566664455777777778999999999888888877763....5888************************************************* PP

                  EETCTCCCHHHHHHHHSCC-EECEEEEESCCS-HCCHCCCHCCCCSCTTS-TSCCCS-BTTSEEEEEEE--SSSS-EEEEEEHHHHHHHHHHHH.HHH CS
  AMP-binding  99 iatvdselleklleaaakleavklvivldadellkeeelkeeeeseekaekpeeeeelkpddlayiiYTSGTTGkPKGVmlshrnlvanvaslk.let 195
                  i  vd +l+e+  +        ++ ++  +d++l +  lk+ ++ ++      +  + +pd++ay++YTSG+TG+PKGV ++hr++v+++ s++ l++
   EPX74591.1 322 I--VDPALAERFSN--------SVDLLQFSDQSLPS--LKTIDPIPSI-----RF-TSSPDSTAYVLYTSGSTGTPKGVPITHRSAVNSIFSHSfLYP 401
                  *..77666433333........33333232232222..3333333332.....22.569*********************************999999 PP

                  CSCCTTT-EEEESS-TTSCHHHHHHHHHHHHTT-EEEE-TTCGCCHHHHHHHHHHHHT-SEEEEEHHHHHHH.HHCCCHHCHHHHCCGTT-SEEEEES CS
  AMP-binding 196 rfklkeddvvlsilplahifglilelllallsGatvvllpkdaaldpklllelieklkvtviagvPrvleal.lesgalkaakkakdlsslrlvllgg 292
                   f+++++d++l+++ l +++++ +e+++    G ++v +++ +    + l  li+++++t + ++P+v++ + +e+ ++        l  +r++l+ g
   EPX74591.1 402 KFGVSRGDKWLQFANLTFDVSV-YEIFGNWNMGLSLVTSTRQNL--VGCLEFLIHDFGITALELTPTVANVIsVEE-NIH------LLRNVRMLLSIG 489
                  999999***************8.***************998888..5566679******************94553.354......6777******** PP

                  S-EBHHHHHHHHHHHTCEEEEEEEEGGGSSECEECHCTTTCTSTTS-BEE-TTEEEEEE-TTTSCBE.E...TTSEEEEEEEETTS-SEBTT-HHHHH CS
  AMP-binding 293 eplspellrffralfgeevlegYGlTEttgvvtvlpleedkkklgsvGkplpgvevkivDeetgepv.p...dgeeGellvrgpgvmkgYlkkpeata 386
                  e l + +++f+ ++    ++++YG+TE++++vt l+++++ ++++ vG pl+ + + i + +      p   dg  Ge+++ gp++ kgYl+++e+++
   EPX74591.1 490 ELLTKRVIDFWDDR----LVNAYGPTEAAIHVT-LNPSQRFTSVYLVGAPLAAAMLCICNTQSDSSSyPiteDGFLGEVCIAGPQLSKGYLNREELNK 582
                  ************99....689************.8989999******************87754444234447777********************** PP

                  HHEEE.......TCC.EEEEEEEEEEETTSEEEEEEEC CS
  AMP-binding 387 eafds.......egr.wlrTGDlgrldedGyleivgRk 416
                  +af++       +    +rTGD gr+  +G+l+i gR+
   EPX74591.1 583 KAFTTafdhngrS-YcIYRTGDCGRII-NGRLYIYGRI 618
                  ***9889987532.459********98.8********8 PP

  == domain 2  score: 30.6 bits;  conditional E-value: 3.6e-11
                   EEEE...CCSTEEEEHHHHHHHHHHHHHHHHHTTSSTT-EEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS-HHHHHHHHHHHTESEEEETCTCC CS
  AMP-binding   13 alvd...sgegqtlTYreldervnrlAagLrslGvkkgdrVaillpnspewvvallailkaGavvvplnptltaeelayiledseakvliatvdse 105 
                   a+ +   +++ + ++Y++l+  +nr A++L+++Gv + ++   ++++s +++ ++la+ k+G+  + ++++l+   l    ++ +a +l+   d+e
   EPX74591.1 1769 AIRYietNDQLRNMSYADLNFFSNRWASWLLAKGVSSSKTLISYMEKSFDHYCVMLACIKLGVNFSSVDSSLSHGNLLKYTKKINAGFLV--SDKE 1862
                   4444457778899******************99*********************************************999999999999..4444 PP

  == domain 3  score: 20.4 bits;  conditional E-value: 4.5e-08
                   EEEEHHHHHHHHHHHHHHHCSCCTTT-EEEESS-TTSCHHHHHHHHHHHHTT-EEEE-TTCGCCHHHHHHHHHHHHT-SEEEEEHHHHHHHHHCCC CS
  AMP-binding  177 VmlshrnlvanvaslkletrfklkeddvvlsilplahifglilelllallsGatvvllpkdaaldpklllelieklkvtviagvPrvleallesga 272 
                   V + hr +++++ ++  +++ k++e++ +l++++ + i++l ++++++ ++Gat+v+++++  ld + l e+i+   +t++++    + +l ++  
   EPX74591.1 1910 VSIDHRLFLYALLDF--SDTSKVDETSLWLQFASNSNIMQL-FDCFTVWMKGATLVIASQN-LLD-NKLPEVIKSQYITHLNLNSLTVSKLNKD-- 1998
                   778999999999996..56677888999************8.***************9965.455.5688************988888888553.. PP

                   HHCHHHHCCGTT.-SEEEEESS-EBHHHHHHHHHHH CS
  AMP-binding  273 lkaakkakdlss.lrlvllggeplspellrffralf 307 
                              + ++l+++ g++ls+e++++++ + 
   EPX74591.1 1999 ---------ITRsVKLLISYGGRLSSEVVEQWNGRH 2025
                   .........3344*******************9875 PP

  == domain 4  score: 267.8 bits;  conditional E-value: 3.7e-83
                   TSEEEEECCSTEEEEHHHHHHHHHHHHHHHHHTTSSTT-EEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS-HHHHHHHHHHHTESEEEETCTCC CS
  AMP-binding   10 dkvalvdsgegqtlTYreldervnrlAagLrslGvkkgdrVaillpnspewvvallailkaGavvvplnptltaeelayiledseakvliatvdse 105 
                   d++ l  +   +++TY el+ r+n+lA+ L+  G+k g+ + ++ ++++e ++a+lailkaG+    l+ t + e++++i++ds++ ++i   +++
   EPX74591.1 2735 DQISLN-DYVSTKFTYWELNCRANQLAHTLKTYGCKTGTIISVYFDKCIEAFIAILAILKAGCCFLALDVTAPLERIKFIVDDSQSGLII--SSND 2827
                   445553.367899******************99*********************************************************..4444 PP

                   CHHHHHHHHSCC-EECEEEEESCCS-HCCHCCCHCCCCSCTTS-TSCCCS-BTTSEEEEEEE--SSSS-EEEEEEHHHHHHHHHHHHHHHCSCCTT CS
  AMP-binding  106 lleklleaaakleavklvivldadellkeeelkeeeeseekaekpeeeeelkpddlayiiYTSGTTGkPKGVmlshrnlvanvaslkletrfklke 201 
                   +lekl   +++     +v++l a +   +   ++ ++++e+       + l++++lay++YTSG+TGkPKG+ l+h+n+v+++ +++ +   k ++
   EPX74591.1 2828 QLEKL---QSA---NVCVTILNASD---H---DIYDPNSENL----ILDDLDESNLAYVLYTSGSTGKPKGCCLTHKNVVQTMMAFQYQFLGKWNS 2907
                   44433...332...23455555333...2...2223233332....334689*********************************87443355668 PP

                   T-EEEESS-TTSCHHHHHHHHHHHHTT-EEEE-TTCGCCHHHHHHHHHHHHT-SEEEEEHHHHHHHHHCCCHHCHHHHCCGTT-SEEEEESS-EBH CS
  AMP-binding  202 ddvvlsilplahifglilelllallsGatvvllpkdaaldpklllelieklkvtviagvPrvleallesgalkaakkakdlsslrlvllggeplsp 297 
                   d+++ls+++l++++++ le +++ + G ++v +pk+  l+   +  +++ lk+++i ++P+++  l  ++a          + l+++++gge++++
   EPX74591.1 2908 DSRFLSFASLHFDVSV-LEQYFSWSTGTCLVAAPKNLILQ--DIPTAVRVLKISHIDLTPSLASILNPDNA----------PYLQVFITGGEQIRQ 2990
                   ***************8.***************99887655..3679****************999855533..........44************* PP

                   HHHHHHHHHHTCEEEEEEEEGGGSSECEECHCTTTCTSTTS-BEE-TTEEEEEE-TTTSCBEETTSEEEEEEEETTS-SEBTT-HHHHHHHEE..E CS
  AMP-binding  298 ellrffralfgeevlegYGlTEttgvvtvlpleedkkklgsvGkplpgvevkivDeetgepvpdgeeGellvrgpgvmkgYlkkpeataeafd..s 391 
                   e+++ + ++++  +++ +G+TE t+ ++  ++  ++++++ +G+p+p++  +i+  +t+ pv  g  Ge++++g++v+kgYl+ p++t+e+f+  +
   EPX74591.1 2991 EVMEIWGDTGI--LYNFWGPTELTIGASAYRELPKNARTSNIGPPFPNCSTYIISRKTNLPVLLGAIGEICMGGNQVAKGYLNLPKQTEEKFCfyD 3084
                   ***99999974..9*************76444555567888***************************************************9554 PP

                   T..CCEEEEEEEEEEETTSEEEEEEECCCEEEET CS
  AMP-binding  392 e..grwlrTGDlgrldedGyleivgRkkdliklr 423 
                   +  +r + TGDlgrl  d +le+ gR +d+iklr
   EPX74591.1 3085 QfnDRVYYTGDLGRLLSDDSLEFGGRVDDQIKLR 3118
                   55366**********99***************96 PP

>> PP-binding  Phosphopantetheine attachment site
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.1   4.3e-06     0.015      22      65 ..     749     791 ..     745     793 .. 0.91
   2 !   17.3   0.0   1.3e-06    0.0046       4      67 .]    1233    1296 ..    1230    1296 .. 0.80
   3 !   33.7   0.6   9.5e-12   3.4e-08       2      65 ..    2174    2237 ..    2173    2239 .. 0.95
   4 !   33.6   0.1     1e-11   3.6e-08       2      64 ..    3252    3314 ..    3251    3317 .. 0.92
   5 !   20.8   0.1     1e-07   0.00037       2      64 ..    3756    3818 ..    3755    3821 .. 0.93
   6 !   23.9   0.0   1.1e-08   3.9e-05       8      67 .]    4396    4454 ..    4389    4454 .. 0.92

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 4.3e-06
  PP-binding  22 tdlfdlGlDSllavellaaleeefgveiplsdlfehptlaelaa 65 
                 t++f+lG DSl+av+l +++++ +g +i+ls l+    ++++a+
  EPX74591.1 749 TSIFELGYDSLDAVQLSRSFSK-LGYKISLSKLLSSHVVENIAK 791
                 679*******************.5*********99998888886 PP

  == domain 2  score: 17.3 bits;  conditional E-value: 1.3e-06
  PP-binding    4 relvaevlgvpleeidpdtdlfdlGlDSllavellaaleeefgv.eiplsdlfehptlaelaayl 67  
                  r+ ++++l+ p   +d  ++l  +GlDSl+++++ + l+++ g+ +++ s++  +p++  l++++
  EPX74591.1 1233 RSTLSKLLNKPFHLVDRYENLQLYGLDSLMLLRVFSDLRKQ-GIqDLNFSQIGSYPSVTTLCRMI 1296
                  55666666655444566689999******************.555*******66********987 PP

  == domain 3  score: 33.7 bits;  conditional E-value: 9.5e-12
  PP-binding    2 klrelvaevlgvpleeidpdtdlfdlGlDSllavellaaleeefgveiplsdlfehptlaelaa 65  
                   + +l+++ +++p + i+++t +++lGlDSl+a++l + l++++ ++i+  d++e +t+ +l++
  EPX74591.1 2174 DVSSLISSFFNIPSQTIKLETEISSLGLDSLSAIQLSRILRKQYRTKISALDVLESTTIFDLSR 2237
                  57899******************************************************98886 PP

  == domain 4  score: 33.6 bits;  conditional E-value: 1e-11
  PP-binding    2 klrelvaevlgvpleeidpdtdlfdlGlDSllavellaaleeefgveiplsdlfehptlaela 64  
                  k+++++a+ l+++ ++++++t++f+lG+DS++av+l+a+l+e    + ++ +l++  +++ ++
  EPX74591.1 3252 KILQIIAKFLNLSISDFKASTSIFELGIDSISAVSLAAMLRENGYRSASPVQLLNSVSISKIS 3314
                  799***************************************988899999999888888776 PP

  == domain 5  score: 20.8 bits;  conditional E-value: 1e-07
  PP-binding    2 klrelvaevlgvpleeidpdtdlfdlGlDSllavellaaleeefgveiplsdlfehptlaela 64  
                   l+++++e  +v++e+++ +t +++lG+DS++++ l ++l+++   +++l  +++ ptl +++
  EPX74591.1 3756 LLIDILSEKVKVSVEDFKKNTYIYELGIDSIDLIWLSSKLSAAGSSKFDLGLFMTDPTLFQML 3818
                  5899******************************************************96665 PP

  == domain 6  score: 23.9 bits;  conditional E-value: 1.1e-08
  PP-binding    8 aevlgvpleeidpdtdlfdlGlDSllavellaaleeefgveiplsdlfehptlaelaayl 67  
                  ++ l++p   id + ++ +lGlDS+ a+++ + l+   g+++++  ++++p+++ la+y+
  EPX74591.1 4396 SSSLNIPSHLIDRSVTFMELGLDSVHAIKFSSLLRNS-GIPVTVPNILQNPSIQFLAHYI 4454
                  6678898888999***********************9.******************9997 PP

>> Transferase  Transferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.39   1.4e+03     148     224 ..     926    1003 ..     923    1018 .. 0.68
   2 !    5.6   0.0    0.0014       5.2     150     225 ..    1452    1533 ..    1449    1550 .. 0.68
   3 ?    0.7   0.0     0.043   1.6e+02     148     184 ..    3450    3485 ..    3444    3512 .. 0.79
   4 ?   -4.3   0.0       1.5   5.4e+03     138     165 ..    3973    4001 ..    3972    4012 .. 0.79
   5 !    3.3   0.0    0.0072        26     144     170 ..    4612    4638 ..    4609    4654 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.39
  Transferase  148 lgvsvsHaiaDgaSlktfieswaelarge.kkvtvtp.lfarelllprpeppsvefdqlelrkfsasettevkevvtkk 224 
                   l++   Ha  Dg Sl  + +++  l +++  ++ +++ ++ rel   + ++   e+ ++  + ++ s+t+ +k+ ++++
   EPX74591.1  926 LSIIWHHALYDGWSLDVIRQQLELLLKKKpLPIYSQFvEYVRELHFTK-QRSMEENMHFWKDYLKGSKTKSLKQKTKNS 1003
                   788899*********999999999999985344455514555555555.666667777775667777666666655544 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.0014
  Transferase  150 vsvsHaiaDgaSlktfieswaelargekkvtvtplfarelllpr..peppsv.....efdqlelrkfsasettevkevvtkki 225 
                   + + H+  D+ S+  +  ++a+l+r e ++tv+p+ +    + +  +++ +       fd+++ + f++  t  +ke+  k++
   EPX74591.1 1452 IYMHHTLYDAWSFRIIFDQLAKLSRAE-QLTVSPSMRPYIEYLHltNDETKMltwkrIFDNFKPVPFPRGMTSDKKESYVKRV 1533
                   6699***********************.8899888775433333212233325565544555433366666666666666665 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.043
  Transferase  148 lgvsvsHaiaDgaSlktfieswaelargekkvtvtpl 184 
                   ++  + H + Dg Sl  +++++a+ ++   ++ + pl
   EPX74591.1 3450 ISLELFHGVYDGWSLDIILNDLARFSQTR-ELPERPL 3485
                   778888*******************9988.4444444 PP

  == domain 4  score: -4.3 bits;  conditional E-value: 1.5
  Transferase  138 vTkfkcG.gvalgvsvsHaiaDgaSlktf 165 
                   vT+f    +  + v + Ha  Dg Sl+ +
   EPX74591.1 3973 VTFFTVKdSHYMCVEMHHALYDGWSLSLM 4001
                   56665544678999***********9865 PP

  == domain 5  score: 3.3 bits;  conditional E-value: 0.0072
  Transferase  144 GgvalgvsvsHaiaDgaSlktfieswa 170 
                   G + l++s+ Ha  Dg S++ +++ + 
   EPX74591.1 4612 GKLLLSISIHHALYDGWSINILLQRLS 4638
                   7789******************99876 PP

>> AMP-binding_C  AMP-binding enzyme C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.3   0.0   0.00015      0.52      27      76 .]     654     697 ..     640     697 .. 0.88
   2 ?    1.2   0.0      0.21   7.4e+02      42      76 .]    3180    3214 ..    3126    3214 .. 0.64
   3 ?   -1.9   0.0       1.9   6.7e+03      43      67 ..    4323    4347 ..    4311    4355 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00015
                    ---EEEEEE------HHHHHHHHHHHHT-TTTS-SEEEE-S---B-TTS- CS
  AMP-binding_C  27 ealvafVvlkdgsealeeeLkahvrkelgpyavpkkvvfvdelpktrsGK 76 
                    e+lvaf v    s   ee++k +++++l ++++p + v v+ lp   sGK
     EPX74591.1 654 ERLVAFFVG---S---EENVKNQAETNLQAWMRPTDYVSVETLPYLPSGK 697
                    799***996...3...4***************************999998 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.21
                     HHHHHHHHHHHHT-TTTS-SEEEE-S---B-TTS- CS
  AMP-binding_C   42 leeeLkahvrkelgpyavpkkvvfvdelpktrsGK 76  
                     + +   ++++++l++y+vp  ++ ++ +p+t + K
     EPX74591.1 3180 TIQIADEYCNSHLATYMVPTFLIPINWVPLTPTNK 3214
                     566667899**************99999*999877 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 1.9
                     HHHHHHHHHHHT-TTTS-SEEEE-S CS
  AMP-binding_C   43 eeeLkahvrkelgpyavpkkvvfvd 67  
                      +++ + +r +l+p+  p+ +v v 
     EPX74591.1 4323 LKKIAKECRMKLPPFLMPNFLVPVT 4347
                     4678888899********9888664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (4906 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       680  (0.0379274); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.79u 0.33s 00:00:02.12 Elapsed: 00:00:00.55
# Mc/sec: 26809.68
//
Query:       EPX74592.1  [L=434]
Description: ornithine N5 monooxygenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   3.7e-104  348.6   0.0   4.3e-104  348.3   0.0    1.0  1  K_oxygenase    L-lysine 6-monooxygenase (NADPH-requiring)
      1e-06   28.8   0.0    9.4e-05   22.5   0.0    2.5  2  NAD_binding_9  FAD-NAD(P)-binding
    2.6e-06   26.9   0.0    0.00021   20.7   0.0    2.7  3  Pyr_redox_3    Pyridine nucleotide-disulphide oxidoreductase
    3.8e-06   26.4   0.0    0.00027   20.3   0.0    2.3  2  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
  ------ inclusion threshold ------
      0.042   13.4   0.0        6.1    6.3   0.0    2.5  3  DAO            FAD dependent oxidoreductase


Domain annotation for each model (and alignments):
>> K_oxygenase  L-lysine 6-monooxygenase (NADPH-requiring)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  348.3   0.0  1.2e-107  4.3e-104       2     342 .]      10     355 ..       9     355 .. 0.94

  Alignments for each domain:
  == domain 1  score: 348.3 bits;  conditional E-value: 1.2e-107
  K_oxygenase   2 ilDligiGiGpsnLsLailleevk....kelkalflerqpefaWhpgmllegaelqisfLkDlvtlrdPtspfsFlnYlkekg..rLykFlnletflp 93 
                  +lDl++iG+Gp++LsL ++l++++    +++k+++le++p+f+Wh+gml++g+++qisf+kDl+t+rdPts+fsFlnYl+++g  rL+ Flnl t++p
   EPX74592.1  10 TLDLVIIGFGPASLSLMVALHDHSenplRNKKICVLEKSPSFSWHSGMLIPGSNMQISFVKDLATPRDPTSYFSFLNYLHQHGdeRLSGFLNLLTMEP 107
                  79**********************999999****************************************************767************* PP

  K_oxygenase  94 sRkefedYlrWvasqleeqvrfgeeveevepdeeeeeelltveskdaegeeeelearnlvlgvGtepkiPevleklegkervvHsseylerkee...l 188
                  sR ef+dYl W+a ++++ v++g++v+++e+d++   +l++++     g  ++  a+n+++++G++++iPe + +l+ +++v+Hss ++ + ++   +
   EPX74592.1 108 SRYEFHDYLCWAAGHFKDYVQYGANVTKLEYDQSL--DLYRITY----G-DHQKIAKNVIVATGGQANIPEPFSSLQ-SPQVIHSSGFMFDDSQcklR 197
                  *********************************86..69****8....4.58889*********************9.6***********99999999 PP

  K_oxygenase 189 lakkriaVvGsGqSaaeifedllrr.qkkvelklvtrsealeplddspfvne.ifsPeyvdyfyslpeekreallkeqkatnykgvdaelieelyeel 284
                   ak+ ++V+GsGqSaaei++  ++   +k  l+l  r+ +l p+d+spfvn+ +f+++  +++y+lpe++r + l++ ++tny++v++ l+e++++e 
   EPX74592.1 198 SAKHGVLVIGSGQSAAEIWNYTHNIiDSKLPLTLAYRNLSLIPSDSSPFVNSlYFDSHNSHWWYNLPEQTRIQGLRNGHTTNYGVVKEGLLEDMFREQ 295
                  99**********************95667***********************66******************************************** PP

  K_oxygenase 285 yeqkvk.geerlrllpnrevesaeaegkgeveltlrneesg..eeetlevdavvlATGYrr 342
                  y qk+k g++ +++l+ + v+s+e++ + ++ +tl  + +g  +++t+++d+v+lATGY++
   EPX74592.1 296 YMQKLKyGKAYHNFLNATYVDSVEQKDD-HILVTLASNLDGneKKTTQKFDVVYLATGYNH 355
                  ******44557***************98.6666655555442277899***********85 PP

>> NAD_binding_9  FAD-NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   2.6e-08   9.4e-05       1     155 [.      14     165 ..      14     166 .. 0.72
   2 ?    4.0   0.0     0.013        46      83     155 ..     275     353 ..     203     354 .. 0.61

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 2.6e-08
  NAD_binding_9   1 aivGaGprGlavlerLlara.kkkspleitlfdpsepgagrvwrtdq.seelllNvpasemslftddp........ptfaeWlrergalee...ae 83 
                    +i+G Gp+ l+++ +L +++ ++ ++ +i + ++s++     w++    +    N++ s ++   d           +f ++l+++g+ e+     
     EPX74592.1  14 VIIGFGPASLSLMVALHDHSeNPLRNKKICVLEKSPSF---SWHSGMlIPG--SNMQISFVK---DLAtprdptsyFSFLNYLHQHGD-ERlsgFL 100
                    7*******************999999********9986...4555521222..233333333...222223447789**********7.2244533 PP

  NAD_binding_9  84 eldpddfvpRalyGrYlrdlfeellarlpegvtvevhraevvdleeradgq.avlladgaslaadaVvLAlGh 155
                    +l     ++R  + +Yl +++ ++ + ++       + a+v++le +++   + ++ ++++  a++V++A+G 
     EPX74592.1 101 NLL-TMEPSRYEFHDYLCWAAGHFKDYVQ-------YGANVTKLEYDQSLDlYRITYGDHQKIAKNVIVATGG 165
                    333.3568***************998886.......6799999999987752333444466789999999996 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.013
  NAD_binding_9  83 eeldpddfvpRalyGrYlrdlfeellarlpegvtvevhra.evvdleeradgqavll.......adgaslaadaVvLAlGh 155
                     +++ + +v+  l+ + +r+++ + l+  ++    ++++a  v ++e+++d+  v+l       +++++ ++d V LA+G 
     EPX74592.1 275 GHTTNYGVVKEGLLEDMFREQYMQKLKYGKA--YHNFLNAtYVDSVEQKDDHILVTLasnldgnEKKTTQKFDVVYLATGY 353
                    5556666666666666666666666654433..33455551455677788887777744433322234569********96 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.22   7.9e+02       1      29 [.      14      47 ..      14      53 .. 0.73
   2 !   20.7   0.0   5.7e-08   0.00021      76     179 ..     105     215 ..      74     247 .. 0.78
   3 ?    2.9   0.0     0.015        55     232     279 ..     312     366 ..     290     394 .. 0.62

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.22
  Pyr_redox_3  1 iIiGaGPaGlaaaielkkagl.....edylilEk 29
                 +IiG GPa l+  ++l ++       +++++lEk
   EPX74592.1 14 VIIGFGPASLSLMVALHDHSEnplrnKKICVLEK 47
                 7*********999999877653333355666666 PP

  == domain 2  score: 20.7 bits;  conditional E-value: 5.7e-08
  Pyr_redox_3  76 eklsrkealeYlrevaksfelpiklfeeVesvkked..egfevetsketyeAkkviiAtGef.dkPnklnipGeek.lvkhyskv....kefh.kyag 164
                   ++sr e+ +Yl   a +f+  +++  +V++++ ++  + ++++   ++  Ak+vi+AtG   ++P+   ++  ++ +v+h+s +    ++++   a+
   EPX74592.1 105 MEPSRYEFHDYLCWAAGHFKDYVQYGANVTKLEYDQslDLYRITYGDHQKIAKNVIVATGGQaNIPEP--FSSLQSpQVIHSSGFmfddSQCKlRSAK 200
                  579999***************************9763367*******************973034443..3333322778877653332333213458 PP

  Pyr_redox_3 165 qkvvViGgknSavDa 179
                  + v+ViG + Sa+++
   EPX74592.1 201 HGVLVIGSGQSAAEI 215
                  89**********985 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.015
  Pyr_redox_3 232 naevkeikekeeeykvk.....tedgkkvevkddvvla.tGykpd.lsflkkslf 279
                   + v+++++k+ ++ v+       ++kk+++k dvv++ tGy+   ++ + +++f
   EPX74592.1 312 ATYVDSVEQKDDHILVTlasnlDGNEKKTTQKFDVVYLaTGYNHAsYETILSPIF 366
                  555677777777776664444444567777788888777***6431555555555 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   7.5e-08   0.00027       2     161 ..      12     219 ..      11     236 .. 0.70
   2 !    3.6   0.0    0.0088        32      41     110 ..     282     354 ..     250     394 .. 0.69

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 7.5e-08
                  SEEEE--SHHHHHHHHHHHH......HTS-EEEEETTHCHHHCSHHH...HCHHHHHHHHHHHHH................................. CS
                  xxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxx................................. RF
  Pyr_redox_2   2 dvvviGgGpAGlaaaltlaq......agakvtlvelegtclnggcll...skallgvaedaeias................................. 57 
                  d+v+iG GpA l+++  l         + k+ ++e+   + ++  +l   s    +++      +                                 
   EPX74592.1  12 DLVIIGFGPASLSLMVALHDhsenplRNKKICVLEKSPSFSWHSGMLipgS--NMQISFV----Kdlatprdptsyfsflnylhqhgderlsgflnll 103
                  789************999997777766888888875555555544442221..1222222....1223455667788899999999999999999999 PP

                  .................HHHHCHHHHCCCCHCCTCEEEEESCEEEEETEEECTCEEEEEESEEEE---EEE-BC.TCTTC..TTBEECCSECHHHHHH CS
                  .................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxx.xxxxxxxxxxxxxxxxx RF
  Pyr_redox_2  58 .................evvkklnqgielllgeevvkidpgkkkvklekkkegdeekiaydklvlAtGssprdl.gipGv.aenvgklvrtldsaeal 136
                                    +   ++  +++ ++  v+k+++++  + l   + gd++ki ++++++AtG++++++ +   +  ++v+++   + ++ + 
   EPX74592.1 104 tmepsryefhdylcwaaGH---FKDYVQYGAN--VTKLEYDQ-SLDLYRITYGDHQKI-AKNVIVATGGQANIPePFSSLqSPQVIHSSGFMFDDSQC 194
                  9887777777666655433...3334444444..66666666.555544444887777.59*************988866668888887888888888 PP

                  CCSS-TSEEEEES-SHHHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 137 klkllpkrivvvGgGyiGvElAaal 161
                  kl   +  ++v+G+G  + E+  + 
   EPX74592.1 195 KLRSAKHGVLVIGSGQSAAEIWNYT 219
                  88888888********999976665 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.0088
                  HHHCHHHHHHHHHHHHHHHHHCHHHHCCCCHCCT.CEEEEESCEEEEETEEEC....TCEEEEEESEEEE---EE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2  41 llskallgvaedaeiasevvkklnqgielllgee.vvkidpgkkkvklekkke....gdeekiaydklvlAtGss 110
                  ++++ ll+ + +++ +++   k+++ ++++l+++ v +++++  ++ ++  ++    +++++ ++d + lAtG +
   EPX74592.1 282 VVKEGLLEDMFREQYMQKL--KYGKAYHNFLNATyVDSVEQKDDHILVTLASNldgnEKKTTQKFDVVYLATGYN 354
                  4445555555555555554..77788888888664666655555555543333788888999999********54 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0    0.0017       6.1       1      36 [.      12      55 ..      12      73 .. 0.84
   2 ?    4.6   0.0    0.0056        20     163     206 ..     127     172 ..     106     274 .. 0.69
   3 ?   -3.1   0.0       1.2   4.4e+03     163     203 ..     309     354 ..     303     375 .. 0.57

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0017
                EEEEECTSHHHHHHHHHHHHTT........EEEEESSSSTTSSG CS
         DAO  1 dvviiGGGiiGlstAyeLarrg........Vtllekgdiagsga 36
                d+viiG G + ls   +L  +         +++lek++ +++++
  EPX74592.1 12 DLVIIGFGPASLSLMVALHDHSenplrnkkICVLEKSPSFSWHS 55
                89****************555334577789*******8888654 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.0056
                 EEESECEEEEEEEE..TCEEEEEEECTEEE.EEEEEEEE--GGGHH...H CS
         DAO 163 ilegtevtgleeed..gkvwgverttpgen.daadavVnaaGawsd...l 206
                 + +g++vt+le  d   +++++   t g   ++a+ v++a+G +++    
  EPX74592.1 127 VQYGANVTKLEY-DqsLDLYRI---TYGDHqKIAKNVIVATGGQANipeP 172
                 567889999954.424444555...33333245688******99984431 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 1.2
                 EEESECEEEEEEEE.TCEEEEE.....EECTEEEEEEEEEEE--GGG CS
         DAO 163 ilegtevtgleeed.gkvwgve.....rttpgendaadavVnaaGaw 203
                 +l+ t v ++e++d   ++++      ++++ +++++d v +a+G  
  EPX74592.1 309 FLNATYVDSVEQKDdHILVTLAsnldgNEKK-TTQKFDVVYLATGYN 354
                 5566667777665432223332444432222.122457788888865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (434 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       360  (0.0200792); expected 358.6 (0.02)
Passed bias filter:                      304  (0.0169558); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 3048.87
//
Query:       EPX74593.1  [L=196]
Description: Ino80 complex subunit Ies4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-24   86.3   8.6    9.7e-24   84.7   3.4    2.2  2  INO80_Ies4  INO80 complex subunit Ies4


Domain annotation for each model (and alignments):
>> INO80_Ies4  INO80 complex subunit Ies4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.9   1.3    0.0025        46      25      63 ..       5      43 ..       1      86 [. 0.65
   2 !   84.7   3.4   5.4e-28   9.7e-24     146     230 ..      91     174 ..      49     190 .. 0.73

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.0025
  INO80_Ies4 25 livtlkvspekLrailedkekekkeekespasssaapaa 63
                l++ +++++e+ r+i+++ +++++++ +sp+++s+++++
  EPX74593.1  5 LVLHFRLPTERFREIVDSVKEKDSSHISSPTQASKTQEK 43
                577899999999999996555555555666555544333 PP

  == domain 2  score: 84.7 bits;  conditional E-value: 5.4e-28
  INO80_Ies4 146 raaaaahkLGPKAnqGaINAgLRALDRsGkPCRkWekkglqlksFTGvvweiprWrappkkkpeeeeeesaaasaseegdssske 230
                 ++++aa++  PKAn   INAgLRALDRsGkPCRkWekk+++++s   +vw++p+W         +e+ + +  s+++++ ++++e
  EPX74593.1  91 TPTQAASRSAPKANANLINAGLRALDRSGKPCRKWEKKPISIRSVSTIVWKLPTWLGTSDVVD-SETPSPSPISVAQDNRQEQNE 174
                 55666899***********************************************99988665.333333333333333222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       787  (0.0438954); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.28s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1381.12
//
Query:       EPX74594.1  [L=345]
Description: regulator-G-protein signaling domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00076   19.7   0.1     0.0021   18.3   0.0    1.7  2  RGS       Regulator of G protein signaling domain


Domain annotation for each model (and alignments):
>> RGS  Regulator of G protein signaling domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0      0.27   4.8e+03      12      34 ..      22      45 ..      12      53 .. 0.68
   2 !   18.3   0.0   1.1e-07    0.0021      42     112 ..     152     223 ..     126     228 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.27
                HHHHHHHHHHTTCT.HHHHHHHHH CS
         RGS 12 rslFreFlesefse.enlsFwlav 34
                   F  ++++e++  + l+ wl++
  EPX74594.1 22 IYNFYIYVQTEERGvDFLDMWLDI 45
                445666777766666777777776 PP

  == domain 2  score: 18.3 bits;  conditional E-value: 1.1e-07
                 HHHHHHHHHHHHHHHHTSTTSTTSSTS-HHHHHHHHHHHCSS.STTTTTTHHHHHHHHHHHHHHHHHHHHTS CS
         RGS  42 eqeelkkkakeIyneylapsspkelnidkklreelekrleke.qpsrklfeeaqeevfellekdsypkFlks 112
                 +q+ l++  ++I+n+yl ++sp  + ++++l++ l +  + + ++++++f ++ +  f ++ k +y++Fl+ 
  EPX74594.1 152 SQNHLSAFRQKIINRYLTKESPFRVPLPSHLVNPLLNASKYQlSEDPHIFADVHSFMFHFILKPAYNRFLER 223
                 577888999************************999888877799************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (345 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       391  (0.0218082); expected 358.6 (0.02)
Passed bias filter:                      264  (0.0147247); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 2355.61
//
Query:       EPX74595.1  [L=507]
Description: U3 snoRNP protein Nop58 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.9e-85  283.7   0.3    9.9e-85  283.7   0.3    1.8  2  Nop             snoRNA binding domain, fibrillarin
    7.7e-20   71.0   1.7    7.7e-20   71.0   1.7    2.7  2  NOP5NT          NOP5NT (NUC127) domain
  ------ inclusion threshold ------
       0.17   12.0   1.1        9.1    6.3   0.1    2.9  2  Baculo_PEP_C    Baculovirus polyhedron envelope protein, PEP,
          3    7.6  18.1        5.2    6.8  18.1    1.4  1  RR_TM4-6        Ryanodine Receptor TM 4-6
        5.9    6.3  11.0        9.3    5.6  11.0    1.3  1  Endostatin      Collagenase NC10 and Endostatin
          9    6.3   7.2         13    5.8   7.2    1.3  1  Neur_chan_memb  Neurotransmitter-gated ion-channel transmembr


Domain annotation for each model (and alignments):
>> Nop  snoRNA binding domain, fibrillarin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  283.7   0.3   3.3e-88   9.9e-85       1     229 [.     169     399 ..     169     400 .. 0.95
   2 ?   -6.0   5.0         6   1.8e+04      67      69 ..     466     468 ..     428     504 .. 0.43

  Alignments for each domain:
  == domain 1  score: 283.7 bits;  conditional E-value: 3.3e-88
                 HHHHHHHHHHHHHHHHHHHHTTTSTCHHHHS-SHHHHHHHHHHCCCCHCCT.HHTT.HHHHHHHHHHHHCHHHH-SSS-S-HHHHHHHHHHHHHHHHHH CS
         Nop   1 lldeidkeintlhkrvrewYswhFpELeslvkdnleYakvvkligneredlekkeedeelakevimaakvtastsmgaelseedlknikelcdrvlele 99 
                 lld++dke+nt+++rvrewY+whFpE+ ++v+d+l+Ya+v+k++g  r+++++++ ++ l++ev +++k +a+ smg+e++eedl+ni+ l+++vlel+
  EPX74595.1 169 LLDDLDKELNTYAMRVREWYGWHFPEMGKIVQDHLAYARVIKTMG-MRTNCSSTDFSDVLPEEVEATLKSAAEISMGTEITEEDLENISILAEQVLELA 266
                 689******************************************.999*987744444999999999999999************************* PP

                 HHHHHHHHHHHHHHHHHSHHHHHHCHHHHHHHHHHHHSSHHHHHCS-HHHHTTTT-HHHHCCCHH.T---SSSCHHHCSHHHHHTS-CCCHHHHHHHHH CS
         Nop 100 elrkelleYlesrmsaiAPNlsaLvGeevaarLishaGgLtnLakmPastiqilGaekalfralk.kkntpkyGliyhselvqkatppklkkkiaRlla 197
                  +r +l+eYl++rm+aiAPNl+aLvGe v+arLi+haG+L+nLak Past+qilGaekalfralk k++tpkyGliyh++lv++a + k+k+k+aR+la
  EPX74595.1 267 AYRAQLSEYLRNRMHAIAPNLTALVGELVGARLIAHAGSLMNLAKQPASTLQILGAEKALFRALKtKHSTPKYGLIYHASLVGQA-NSKNKGKVARVLA 364
                 *****************************************************************888***************77.************* PP

                 HHHHHHHHHHHTT---...-SHHHHHHHHHHHHHH CS
         Nop 198 aKvalaaRiDafsekd...gslGkklreeiekklk 229
                 +K+al  R+Da ++k+   g++G + r  +e++l+
  EPX74595.1 365 TKAALSLRVDALTDKNtvdGNVGLENRIRVENRLR 399
                 **********888887788*************997 PP

  == domain 2  score: -6.0 bits;  conditional E-value: 6
                 HHH CS
         Nop  67 aak 69 
                   +
  EPX74595.1 466 SKS 468
                 111 PP

>> NOP5NT  NOP5NT (NUC127) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.0   1.7   2.6e-23   7.7e-20       1      65 []       2      65 ..       2      65 .. 0.94
   2 ?  -11.9  12.4         6   1.8e+04      35      35 ..     478     478 ..     451     507 .] 0.53

  Alignments for each domain:
  == domain 1  score: 71.0 bits;  conditional E-value: 2.6e-23
      NOP5NT  1 fiLfEtaaGYaLfkvkdkkllkkddlvkdsvsdlekfsklvkLkaFqkFesaaeALenanaiseG 65
                +iL+EtaaGYa+fk+kdk l k++ lv+d ++++e +s+l+kL++F+kFes+++AL+n++a++eG
  EPX74595.1  2 LILTETAAGYAVFKAKDKLLKKREALVDD-LKTAEGASNLLKLQSFAKFESTVDALDNVSALIEG 65
                79***************866666669999.**********************************9 PP

  == domain 2  score: -11.9 bits;  conditional E-value: 6
      NOP5NT  35 e 35 
                 +
  EPX74595.1 478 K 478
                 1 PP

>> Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.028        83      36     123 ..      49     139 ..      30     153 .. 0.50
   2 ?    6.3   0.1     0.003       9.1      63     100 ..     254     293 ..     225     300 .. 0.78

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.028
  Baculo_PEP_C  36 latlldaietqLnalsedl....ksllaeldt....rldtlltnLtdalnalqdtlrneLtnlnsiltnLlssvtNinstLnnllqalnnldlgal 123
                    ++++da++++   ++ ++    +sll++l++    +l  +  +L +a+n+l   l+ e  + +s + +L     +i + L++l++ l+ +dl+a+
    EPX74595.1  49 FESTVDALDNVSALIEGKVspklSSLLKDLSEkksnMLVVADPKLGNAINKLP-GLEFEVMS-DSSVQDLY---RGIREHLSSLIAGLAPTDLNAM 139
                   44444444444333333330000333333333333366666666666666665.23333222.44444444...4555566666666665555555 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.003
  Baculo_PEP_C  63 t..rldtlltnLtdalnalqdtlrneLtnlnsiltnLlss 100
                   +   l++++ +L +  ++l++ lrn++ ++  +lt L+ +
    EPX74595.1 254 NisILAEQVLELAAYRAQLSEYLRNRMHAIAPNLTALVGE 293
                   3446889999999999*******************99865 PP

>> RR_TM4-6  Ryanodine Receptor TM 4-6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8  18.1    0.0017       5.2      91     160 ..     420     501 ..     384     507 .] 0.49

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0017
                 X...........XXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXX..........XXXXXXXXXXXXX.XXXXXXXXXX CS
    RR_TM4-6  91 a...........eeeeaeeekeeeeepeaeaeekadaengekeekekekeeeekeseeeeeekkkkkkaks.kkkeeaeaee 160
                 +           ++ ++++ +++++e+e+e+e+++d+++++k++k++++++ +++s  ++e+kkk+k +   + ++e+++++
  EPX74595.1 420 EisgeaaynpatDTIVTADDDDKKNESESEEEKSKDKDSKKKKKKSSKSKDVDESSDSKKEKKKKRKSEDGeQVSDEKKKKK 501
                 3444444444444445555555566666666444444444444433332222222222222222222222202222222222 PP

>> Endostatin  Collagenase NC10 and Endostatin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6  11.0    0.0031       9.3      35     134 ..     392     492 ..     389     507 .] 0.42

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0031
  Endostatin  35 lrvrdgwrkvqlgelipllselek.kenevaavqps..Pvvksskerlvllearrktksskesvkakekeaskeeleekaekkveesekslttarrask 130
                 +rv++++r +  g+l pl++++ + +++e++ +     P++++  ++ +  +++++++ +++s+++++k+++k+++++k  +++++s+k+++++r+++ 
  EPX74595.1 392 IRVENRLRSLEGGKLLPLPTTSVQqQKHEISGEA-AynPATDTIVTADDDDKKNESESEEEKSKDKDSKKKKKKSSKSKDVDESSDSKKEKKKKRKSED 489
                 8*****************9887653333333222.2346666655533333222222222222222222222222222222222222222222222222 PP

  Endostatin 131 kepe 134
                  e +
  EPX74595.1 490 GE-Q 492
                 22.1 PP

>> Neur_chan_memb  Neurotransmitter-gated ion-channel transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   7.2    0.0042        13     122     179 ..     439     503 ..     351     507 .] 0.61

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0042
                     ........--------------------------------------SS---TTGGG--.....-- CS
  Neur_chan_memb 122 l.......ssgasseaeelilskskseskkaklseeqgsekastckckckegeeaspstqlskee 179
                             +s +++++++ + +k+k+ sk ++ +e++ s+k++++k k+++ge++s++++++k++
      EPX74595.1 439 DddkknesESEEEKSKDKDSKKKKKKSSKSKDVDESSDSKKEKKKKRKSEDGEQVSDEKKKKKSK 503
                     02221111222222222222222223355555555555566666666666666665555544433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (507 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2652  (0.147917); expected 358.6 (0.02)
Passed bias filter:                      784  (0.043728); expected 358.6 (0.02)
Passed Vit filter:                       272  (0.015171); expected 17.9 (0.001)
Passed Fwd filter:                        32  (0.00178482); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.93u 0.31s 00:00:01.24 Elapsed: 00:00:00.48
# Mc/sec: 3195.31
//
Query:       EPX74596.1  [L=274]
Description: hypothetical protein SOCG_02079 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
       0.14   11.6   2.0       0.21   11.1   2.0    1.2  1  DUF1129          Protein of unknown function (DUF1129)
       0.18   11.6   0.8       0.23   11.3   0.8    1.2  1  FA_desaturase    Fatty acid desaturase
       0.54   10.4  10.9       0.89    9.7  10.9    1.3  1  DUF4870          Domain of unknown function (DUF4870)
        1.2    9.2   5.0          2    8.5   5.0    1.3  1  Phage_holin_3_6  Putative Actinobacterial Holin-X, holin supe
        3.1    6.0   9.0        3.8    5.7   9.0    1.1  1  DUF2070          Predicted membrane protein (DUF2070)
        8.5    5.7   7.7         15    4.9   7.7    1.4  1  TMEM43           Transmembrane protein 43


Domain annotation for each model (and alignments):
>> DUF1129  Protein of unknown function (DUF1129)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   2.0     7e-05      0.21     127     192 ..     128     196 ..     103     201 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 7e-05
     DUF1129 127 mvlvyrlltrekkkkkrp...plwkrllilllllvvwlvlftlvallpaviNpvLpplvliiigviafv 192
                 +++ y++l +  k++ ++    +++++++++l++v++ ++ ++ +ll  +i   L+ ++++  g+i+++
  EPX74596.1 128 FFFSYKYLVPFIKESMKEyvlLWFQITVAAVLVIVAFYMFLFVCSLLVDFIVLLLSGIITFFSGIITLF 196
                 5566777777744444441114566666677777777777778888***************99999865 PP

>> FA_desaturase  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.8   7.7e-05      0.23      88     175 ..     107     191 ..      92     233 .. 0.63

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 7.7e-05
  FA_desaturase  88 rfeglfryllrlllgllvlg.wllalvlglwlrrlarrrapsksrrrkwrllawlllllawlglwlalllllglall....lwlvplllllfl 175
                    r+++  + +l++ l+   +  ++++     +++ +   ++++k++   w  ++++++l+  +++++++l++ +l++     l l  ++++++ 
     EPX74596.1 107 RRQENEALRLGWCLIGSIILnFFFS-----YKYLVPFIKESMKEYVLLWFQITVAAVLV--IVAFYMFLFVCSLLVDfivlL-LSGIITFFSG 191
                    4444445555555544444434333.....77777777777777777777777777777..777777777777776654421.2222222222 PP

>> DUF4870  Domain of unknown function (DUF4870)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7  10.9    0.0003      0.89      24      93 ..     121     203 ..     113     211 .. 0.66

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.0003
     DUF4870  24 ilPlvi..wllkkdksefvdeqgkea..lNFqislliysiilivlsllvligf...ll......lllllllllnlvlviiaai 93 
                 i+ +++  ++++k  ++f++e  ke+  l Fqi++  +++i+++ ++l+++++   ++      +++++ +++ l++ i  a+
  EPX74596.1 121 IGSIILnfFFSYKYLVPFIKESMKEYvlLWFQITVAAVLVIVAFYMFLFVCSLlvdFIvlllsgIITFFSGIITLFFGINSAV 203
                 5555551155667779********974479******99888888767777755332112333344556666666666666655 PP

>> Phage_holin_3_6  Putative Actinobacterial Holin-X, holin superfamily III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   5.0   0.00068         2      27      89 ..     140     200 ..     138     216 .. 0.67

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00068
  Phage_holin_3_6  27 keeakragsgagllgaagvlallalllllvalalalaalwlaalivaavllvlagvlalvglk 89 
                      ke+ k  + +   + +a+vl+++a+ ++l+ + l++    +  l+ +++ +  +++ ++ g++
       EPX74596.1 140 KESMKEYVLLWFQITVAAVLVIVAFYMFLFVCSLLV--DFIVLLLSGIITFFSGIITLFFGIN 200
                      677888888888888999999999999999997666..3444444455555555555544444 PP

>> DUF2070  Predicted membrane protein (DUF2070)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   9.0    0.0013       3.8     103     186 ..     119     210 ..      85     213 .. 0.80

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0013
     DUF2070 103 alvlslalvfalrllvlvavsdesllkavlpaliqpllailllvly........fspesfllllllslifalavylfivvvdrplkrnlgvs 186
                 +l+ s++l f++++  lv + +es++ +vl+ + ++++a+l++v++        +  ++++lll  +++f+ +++ +++ +++ + ++lg++
  EPX74596.1 119 CLIGSIILNFFFSYKYLVPFIKESMKEYVLLWFQITVAAVLVIVAFymflfvcsLLVDFIVLLLSGIITFFSGIITLFFGINSAVTSALGFR 210
                 68889************************999999999999998888888888544445555555556677777777777888887777776 PP

>> TMEM43  Transmembrane protein 43
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   7.7     0.005        15     177     235 ..     140     199 ..     115     209 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.005
      TMEM43 177 keksenklltwllRllGfllmflglllllsplsvlvslipll.gelvglglalvalllsl 235
                 ke+ ++ +l w+   ++ +l++++++++l + s lv++i ll ++++++  ++++l++++
  EPX74596.1 140 KESMKEYVLLWFQITVAAVLVIVAFYMFLFVCSLLVDFIVLLlSGIITFFSGIITLFFGI 199
                 677788999*****************************9996588888777777766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (274 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1052  (0.0586759); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.36
# Mc/sec: 2277.78
//
Query:       EPX74597.1  [L=236]
Description: hypothetical protein SOCG_02080 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
       0.04   13.4   3.2      0.055   13.0   3.2    1.2  1  DUF1129        Protein of unknown function (DUF1129)
      0.047   13.3   0.2       0.13   11.9   0.1    1.7  2  SARAF          SOCE-associated regulatory factor of calcium h
      0.052   13.4   0.1      0.052   13.4   0.1    3.0  5  Synaptobrevin  Synaptobrevin
        1.5    8.9   8.6       0.12   12.4   1.9    2.4  2  CrgA           Cell division protein CrgA
        3.5    8.0   6.8        2.4    8.5   0.1    2.7  3  Orf78          Orf78 (ac78)
        6.6    5.4  10.2         22    3.6  10.2    1.8  1  Presenilin     Presenilin
        7.1    4.8   8.9        9.5    4.4   8.9    1.1  1  DUF2070        Predicted membrane protein (DUF2070)


Domain annotation for each model (and alignments):
>> DUF1129  Protein of unknown function (DUF1129)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   3.2   2.1e-05     0.055      67     197 ..      58     194 ..      46     202 .. 0.64

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2.1e-05
     DUF1129  67 kkakkesk...enpwlmalDnsLlllalfallfgilalfskkkqtasiGlitlllvalvgGlamvlvyrlltre.kkkkkrpplwkrllilllllvvwl 161
                 ++++++s+   ++ w+     +L+ ++lf  ++ ++ +f+ k +    ++  + l a+  G +++++ ++l  +     +   ++k ++ ++   +++l
  EPX74597.1  58 SANNTRSDssaNKEWWKNFFVGLMTIILFYNVVCLVIIFGYKVSPY--SIAFYWLAAISIGSIFIFLLTILVTYpGWYREAGRVIKKFTPAVCKALIIL 154
                 222222224557899999**********************955555..577777777777877777777776665444444444444444444433333 PP

     DUF1129 162 vl...ftlval.lpaviNpvLpplvliiigviafvvryyl 197
                 +    +    l l   i    +++vl++++v+ + + ++l
  EPX74597.1 155 ISlngVGGYVLkLSGGIEYIHSAMVLVVLAVLNICLFVLL 194
                 3300033334458888888888899999999888777665 PP

>> SARAF  SOCE-associated regulatory factor of calcium homoeostasis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   4.9e-05      0.13     209     256 ..      22      82 ..       2      85 .. 0.64
   2 ?   -1.7   0.0      0.68   1.8e+03     113     123 ..     163     173 ..     162     217 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 4.9e-05
       SARAF 209 pgseeeqddpPppy..............sltksqkpssssessqqgeqeeswrpGFWtGlat 256
                 +  ++++d+ Pppy              s+++s ++s++++ s + +++++w ++F  Gl+t
  EPX74597.1  22 KADTHSSDGTPPPYsasnkfidleiadgSAQNSAQESANNTRSDS-SANKEWWKNFFVGLMT 82 
                 222334489999999********9997754555554555444444.4666777999999875 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.68
       SARAF 113 yvLkGSCGveY 123
                 yvLk S G+eY
  EPX74597.1 163 YVLKLSGGIEY 173
                 88888888888 PP

>> Synaptobrevin  Synaptobrevin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1       3.2   8.2e+03      19      38 ..       1      20 [.       1      25 [. 0.74
   2 ?   13.4   0.1     2e-05     0.052      34      83 ..      45      96 ..      40     100 .. 0.71
   3 ?   -3.0   2.5       2.5   6.3e+03      71      84 ..     113     126 ..     107     129 .. 0.39
   4 ?   -3.7   0.0       4.3   1.1e+04      60      73 ..     142     155 ..     133     157 .. 0.52
   5 ?   -3.3   2.3       3.1   7.8e+03      69      81 ..     179     191 ..     173     196 .. 0.40

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 3.2
                   HCCHHHHCHCCCCCHHHHCC CS
  Synaptobrevin 19 mkeNidkvlergekldeLvd 38
                   mk+   +v +++e l +L d
     EPX74597.1  1 MKNKYTSVSDSEESLKTLTD 20
                   67777888888898888866 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 2e-05
                   HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHTX...XXXXXXXXXXXXXXXXX CS
  Synaptobrevin 34 deLvdktenLqssaqqFkkqarklkrkmwwknm...kliiililvvlililii 83
                   +  +  ++n ++++ + ++++   ++k wwkn+    ++iil++ v++l++i+
     EPX74597.1 45 EIADGSAQNSAQESAN-NTRSDSSANKEWWKNFfvgLMTIILFYNVVCLVIIF 96
                   5556666666666665.67788999********88667777777666666654 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 2.5
                    XXXXXXXXXXXXXX CS
  Synaptobrevin  71 ililvvlililiii 84 
                    i i+ ++i++l i+
     EPX74597.1 113 ISIGSIFIFLLTIL 126
                    22333333333333 PP

  == domain 4  score: -3.7 bits;  conditional E-value: 4.3
                    HHHHHTXXXXXXXX CS
  Synaptobrevin  60 kmwwknmkliiili 73 
                    k+    +k  iili
     EPX74597.1 142 KFTPAVCKALIILI 155
                    44444455555554 PP

  == domain 5  score: -3.3 bits;  conditional E-value: 3.1
                    XXXXXXXXXXXXX CS
  Synaptobrevin  69 iiililvvlilil 81 
                    ++++ +v+ i+++
     EPX74597.1 179 VLVVLAVLNICLF 191
                    2222222222222 PP

>> CrgA  Cell division protein CrgA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   1.9   4.8e-05      0.12      15      54 ..      54      93 ..      45     132 .. 0.74
   2 ?   -3.5   0.6       4.5   1.2e+04      36      46 ..     180     190 ..     173     197 .. 0.45

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 4.8e-05
        CrgA 15 kaaertpvkakaakpsprwyvpvmlglmllGllwlvvyYl 54
                +a+e+++++ ++++ +++w++  ++glm + l++ vv  +
  EPX74597.1 54 SAQESANNTRSDSSANKEWWKNFFVGLMTIILFYNVVCLV 93
                356666777778999*****************99998654 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 4.5
        CrgA  36 pvmlglmllGl 46 
                  v+l+++ + l
  EPX74597.1 180 LVVLAVLNICL 190
                 33333333333 PP

>> Orf78  Orf78 (ac78)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.1   0.00095       2.4      40      85 ..      53      98 ..      36     103 .. 0.53
   2 ?   -1.9   0.1       1.7   4.3e+03      67      83 ..     109     125 ..      99     129 .. 0.61
   3 ?    2.4   0.5     0.076   1.9e+02      64      80 ..     178     194 ..     170     208 .. 0.66

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00095
       Orf78 40 kksaaeknditekesnaaekaqalnillisllavvcvlvllyviyY 85
                +++++++n++++++s ++e  ++  + l++++ +  v+ l+++  Y
  EPX74597.1 53 NSAQESANNTRSDSSANKEWWKNFFVGLMTIILFYNVVCLVIIFGY 98
                2222222222222233345566666666666666666666665555 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.7
       Orf78  67 lisllavvcvlvllyvi 83 
                 +++++++ ++++ l  i
  EPX74597.1 109 WLAAISIGSIFIFLLTI 125
                 55566665555555444 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.076
       Orf78  64 nillisllavvcvlvll 80 
                  +l++ ++  +c++vll
  EPX74597.1 178 MVLVVLAVLNICLFVLL 194
                 33444444555666665 PP

>> Presenilin  Presenilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6  10.2    0.0088        22      44     152 ..      59     177 ..      37     203 .. 0.63

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.0088
  Presenilin  44 tpfeeesdstgqkllnsllnalilil.vivvvtfllvlLykyrcykvikgwlilsslllLflvsglllaevlkay........nipldyitlllllwnf 133
                  +++++++s +++ ++ +  +l++i+ +  vv +++++ yk+  y +   wl+  s+  +f++  ++l +    y        +++  +  +l++l+  
  EPX74597.1  59 ANNTRSDSSANKEWWKNFFVGLMTIIlFYNVVCLVIIFGYKVSPYSIAFYWLAAISIGSIFIFLLTILVTYPGWYreagrvikKFTPAVCKALIILISL 157
                 223346777778889998888776650556788888888**************9998877777777776655555444554544444444555555555 PP

  Presenilin 134 gvvGviaifw.kgplllqqa 152
                   vG + +    g  +++ a
  EPX74597.1 158 NGVGGYVLKLsGGIEYIHSA 177
                 44444444442444455544 PP

>> DUF2070  Predicted membrane protein (DUF2070)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   8.9    0.0037       9.5      72     175 ..      76     195 ..      61     200 .. 0.52

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.0037
     DUF2070  72 lflalltelivviisllaillsall.qalvllalvls..lalvfalrllvlvavsde.sllkavlpaliqpllailllvly.............fspes 153
                 +f+ l+t +++  ++ l i++ + + + ++ ++++ +  + ++f++ l +lv++ ++ ++   v+  ++  +  +l+++ +              + e+
  EPX74597.1  76 FFVGLMTIILFYNVVCLVIIFGYKVsPYSIAFYWLAAisIGSIFIFLLTILVTYPGWyREAGRVIKKFTPAVCKALIIL-IslngvggyvlklsGGIEY 173
                 4444444444433344444444444544444444444336667777777776665531333334444433333333333.3477789999999845555 PP

     DUF2070 154 fllllllslifalavylfivvv 175
                 +  +++l+++ +l + lf+ ++
  EPX74597.1 174 IHSAMVLVVLAVLNICLFVLLI 195
                 6666666666666666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (236 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1067  (0.0595125); expected 358.6 (0.02)
Passed bias filter:                      509  (0.0283898); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.38
# Mc/sec: 1856.12
//
Query:       EPX74598.1  [L=229]
Description: hypothetical protein SOCG_02081 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       652  (0.0363657); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.36
# Mc/sec: 1901.70
//
Query:       EPX74599.1  [L=254]
Description: SWI/SNF complex subunit Snf30 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       752  (0.0419432); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.21s 00:00:00.66 Elapsed: 00:00:00.38
# Mc/sec: 2006.74
//
Query:       EPX74600.1  [L=826]
Description: ubiquitin carboxy terminal hydrolase Ubp7 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.2e-42  144.4   8.4    3.1e-41  141.6   8.4    2.1  1  UCH             Ubiquitin carboxyl-terminal hydrolase
    1.1e-12   48.3   9.0    5.1e-06   26.3   1.0    3.7  3  UCH_1           Ubiquitin carboxyl-terminal hydrolase
    7.2e-07   29.4  11.4    7.2e-07   29.4  11.4    3.3  3  zf-UBP          Zn-finger in ubiquitin-hydrolases and other p
  ------ inclusion threshold ------
       0.25   11.7   6.3        0.1   13.0   2.9    2.1  2  RPAP2_Rtr1      Rtr1/RPAP2 family
        1.2    9.3   7.6       0.88    9.8   5.0    2.0  2  Papo_T_antigen  T-antigen specific domain


Domain annotation for each model (and alignments):
>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.6   8.4   8.7e-45   3.1e-41       2     257 .]     187     822 ..     186     822 .. 0.89

  Alignments for each domain:
  == domain 1  score: 141.6 bits;  conditional E-value: 8.7e-45
                 EES-SSSTHHHHHHHHHHHTSHHHHHHHHTCHHCCSSTCCCCC-.TT.TTS.TTHHHHHHHHHHHHHH..SH-CCEE--HHHHHHHHHHSGGGTSSSTC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH   2 GlsNlGntCymnsvlQcLfsipelrdyllsleevkkesrnkkelnesnplgkkgelakalkdlfkell..kskskavsPkklkktlsklaksfsgykqq 98 
                 Gl+N+G+tCy nsvlQ+L+s ++l d + +  +  ++++ k  l+ +n  + +  l+ a+ +++k+++    + + + P  l + ++  +++fs + qq
  EPX74600.1 187 GLKNMGATCYFNSVLQVLSSSEHLHDCISRR-PFRSDRNPK--LHFEN--HLDSSLLSAFVRFMKSFYraDGSVTVFRPGILFSEFRYRHPQFSEGIQQ 280
                 9************************999993.333333333..23333..44457*************874467899********************** PP

                 EHHHHHHHHHHHHHHHHCC................................................................................ CS
                 xxxxxxxxxxxxxxxxxxx................................................................................ RF
         UCH  99 DaqEflaflLdqlhedlnr................................................................................ 117
                 Da+E+l++lL++l ++ ++                                                                                
  EPX74600.1 281 DAHELLRYLLNDLINEEKEvarvgstiaspspqshsnaasenghqsnnnhkpasplttpinnhsvsvgadivssyihspnispipcaskedhsiqnvds 379
                 *************999988999************99998888888888888888888888888888888888888888888888888888888888888 PP

                 .................................................................HCCCHHH.HHHCCCTTSHHHHHH-EEEEE..... CS
                 .................................................................xxxxxxx.xxxxxxxxxxxxxxxxxxxxx..... RF
         UCH 118 .................................................................evaeekw.kkhlkrndslitdlfegqlks..... 145
                                                                                  + ++++  +++++  + +i++lf g+l s     
  EPX74600.1 380 sqlnivnisetkanenfvitgsnnpfkkdnrrdiyshlqkglsqdgvdeannhfpnfdeftasstN-DSDNSmNMDEEHAQTVIDSLFTGRLVSlilck 477
                 888888888888888888888888888888888888888888888888888888888877777643.333333666677777777778888877***** PP

                 ................................................................................................... CS
                 ................................................................................................... RF
         UCH 146 ................................................................................................... 145
                                                                                                                    
  EPX74600.1 478 nckevsksyeptqdfslsihahsknlskrhrfhralrsrfgrspkkpidvpdvkiiiddvnsvneknpdesnenkpetpterdaaedeksagnsyfqsf 576
                 *************************************************************************************************** PP

                 ................................................................................................... CS
                 ................................................................................................... RF
         UCH 146 ................................................................................................... 145
                                                                                                                    
  EPX74600.1 577 rrlsnrsihsrrsqkqssnlsslifpesliadsahinepntivdclrnftrieelsgdnmfacescgrscdcksasnhgsvsqentedestcdcslnft 675
                 *************************************************************************************************** PP

                 ......EEEEEE.B-SEEEEEEESEEETEE......EEE--SEEB--SEEE-GGGBSS-BTTS-TCS-BEEEEEEEEEESCTTSEEEEEEEECTTTTE. CS
                 ......xxxxxx.xxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx. RF
         UCH 146 ......klklkr.lPeiLiihlkRfsynss......ksKlntkvefpeeldlssylaeekkkkteekkkYeLiavvvHsGslssGHYvayiknekngk. 230
                       +l +++ lP++++ihlkRf  n s      ++K+n  v+f++eld+++++    +++  e++kY+L++vv HsG+l++GHYvay+ ++   k 
  EPX74600.1 676 yreaykRLLIDSpLPPVFVIHLKRFHHNFSadgscdPKKINGFVQFEQELDVNEFVMPTIRSS--EGNKYRLFGVVAHSGTLNYGHYVAYVLSH---Kh 769
                 *****977776449************977777889**********************888887..5677********************99944...23 PP

                 ..........................EEEEETTEEEEE-HHCCCTT.CEEEEEE CS
                 ..........................xxxxxxxxxxxxxxxxxxxx.xxxxxxx RF
         UCH 231 ..........................WykydDetvkevkeeeevls.sayiLfY 257
                                           W++++D+ v ++++e ev++ +ay+LfY
  EPX74600.1 770 vpvdrstsptsetsesetepgskerqWLYISDNMVLKTSWE-EVSKvEAYMLFY 822
                 45888899999999999***********************9.89999******* PP

>> UCH_1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.0   0.00016      0.58       2      26 ..     187     211 ..     186     231 .. 0.85
   2 !   14.5   1.3   5.5e-06      0.02     102     190 ..     418     520 ..     274     527 .. 0.71
   3 !   26.3   1.0   1.4e-09   5.1e-06     124     317 ..     555     801 ..     532     804 .. 0.67

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00016
                 xxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1   2 GLEnhivnsYlNslLQvlyfipplr 26 
                 GL n  +++Y Ns+LQvl   ++l 
  EPX74600.1 187 GLKNMGATCYFNSVLQVLSSSEHLH 211
                 9*****************8777776 PP

  == domain 2  score: 14.5 bits;  conditional E-value: 5.5e-06
                 x...............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 102 i...............qsfnrflldqlekelketkknsseeesaieqllgtkaettirclkCgseksrksstlvldlkyPkpsnekkeakvtfasilks 185
                 +                +f +f  + +++  ++++ +++++++ i++l++ ++++ i c++C++ ++  + t  ++l+  + ++++ +++++f   l+s
  EPX74600.1 418 QkglsqdgvdeannhfPNFDEFTASSTNDSDNSMNMDEEHAQTVIDSLFTGRLVSLILCKNCKEVSKSYEPTQDFSLSI-HAHSKNLSKRHRFHRALRS 515
                 144444444443332245666666666666666666669999*********************************9977.445557778899*****99 PP

                 xxxxx RF
       UCH_1 186 slere 190
                  + r 
  EPX74600.1 516 RFGRS 520
                 99884 PP

  == domain 3  score: 26.3 bits;  conditional E-value: 1.4e-09
                 x.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.x...xxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxx RF
       UCH_1 124 s.......seeesaieqllgtkaettirclkCgseksrksstlvldlkyP.k...psnekkeakvtfasilkssler...ekttrawCekCkryqpteq 208
                 +       + e+sa ++ ++     ++r+++    +s+k+s+   +l+ P       + + ++  t+ ++l+++        ++   Ce+C r    ++
  EPX74600.1 555 TpterdaaEDEKSAGNSYFQSFRRLSNRSIHS--RRSQKQSSNLSSLIFPeSliaD-SAHINEPNTIVDCLRNFTRIeelSGDNMFACESCGRSCDCKS 650
                 14444444444444555555555555666644..4444444444457777535532.333344468999999988774445677889999988887777 PP

                 xxxxx................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 209 rktvk................................nlPpvLalnakleeeeelelwktknwlpleiklsldedknleeklkeerekakaekeikvYe 275
                  ++                                   lPpv+++++k+++ +   + ++ +  p++i+  ++ +++   + +e   ++  ++e ++Y 
  EPX74600.1 651 ASNHGsvsqentedestcdcslnftyreaykrllidsPLPPVFVIHLKRFHHN---FSADGSCDPKKINGFVQFEQE--LDVNEFVMPTIRSSEGNKYR 744
                 77666777899999999999999999999999999999**********98777...555658888999998888885..4444445555788999**** PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................xxxxx...xxxxxxx RF
       UCH_1 276 LqsvvvhigdskesghLvslvkvaekeler................dppes...qWylFND 317
                 L++vv+h g + + gh+v++v   ++   +                    s   qW+ + D
  EPX74600.1 745 LFGVVAHSG-TLNYGHYVAYVLSHKHVPVDrstsptsetsesetepG---SkerQWLYISD 801
                 *********.777********85333333366667776665544322...14568887766 PP

>> zf-UBP  Zn-finger in ubiquitin-hydrolases and other protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4  11.4     2e-10   7.2e-07       8      60 ..      70     122 ..      58     126 .. 0.82
   2 ?   -2.6   0.2       2.1   7.5e+03      13      40 ..     475     508 ..     472     515 .. 0.51
   3 ?    0.7   1.5       0.2     7e+02       9      29 ..     634     654 ..     620     680 .. 0.82

  Alignments for each domain:
  == domain 1  score: 29.4 bits;  conditional E-value: 2e-10
                 .SSEEEETTT--EEE-TTTT-HHHHHHH.HH---EEEETTT--EEETTTTEEBE CS
      zf-UBP   8 nknlWlCLkCghvgCgrksnghalkHye.etrHplavdlstlsvycyscddeve 60 
                 + +l lC  Cg+ +C   + +h+++Hy+ +++H ++v++ tl+++c++c++ev 
  EPX74600.1  70 DYELNLCTNCGYLFCAH-NDNHSITHYRkNNKHSVFVNIVTLKCFCFACNMEVL 122
                 456899**********7.569******84777*******************995 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 2.1
                 EETTT--EEE-TTT......T-HHHHHHHHH--- CS
      zf-UBP  13 lCLkCghvgCgrks......nghalkHyeetrHp 40 
                 lC  C  v+   +       + ha++ + ++rH 
  EPX74600.1 475 LCKNCKEVSKSYEPtqdfslSIHAHSKNLSKRHR 508
                 5666666666643333343333444444455555 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.2
                 SSEEEETTT--EEE-TTTT-H CS
      zf-UBP   9 knlWlCLkCghvgCgrksngh 29 
                 +n+++C +Cg+   +++ ++h
  EPX74600.1 634 DNMFACESCGRSCDCKSASNH 654
                 689*******98888777666 PP

>> RPAP2_Rtr1  Rtr1/RPAP2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   2.9   2.8e-05       0.1      14      59 ..      72     114 ..      71     126 .. 0.89
   2 ?   -3.7   0.1       4.3   1.6e+04      24      43 ..     474     495 ..     472     508 .. 0.58

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2.8e-05
                 HHHCTT--SSTT--S--SS-----------.....--TTGGGGT-S CS
  RPAP2_Rtr1  14 ERniekkCGyplCnnsleedkrqkekyrisrkakkvvereelekfC 59 
                 E n++++CGy  C ++++++    ++yr + k++  v++  l++fC
  EPX74600.1  72 ELNLCTNCGYLFCAHNDNHSI---THYRKNNKHSVFVNIVTLKCFC 114
                 66999**********996655...9********************* PP

  == domain 2  score: -3.7 bits;  conditional E-value: 4.3
                 TT--S--SS--..--------- CS
  RPAP2_Rtr1  24 plCnnsleedk..rqkekyris 43 
                 +lC+n +e +k  + ++ + +s
  EPX74600.1 474 ILCKNCKEVSKsyEPTQDFSLS 495
                 6777766655544555566555 PP

>> Papo_T_antigen  T-antigen specific domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       1.1     4e+03      11      41 ..      39      68 ..      31      75 .. 0.68
   2 ?    9.8   5.0   0.00025      0.88      27      83 ..      77     138 ..      69     145 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 1.1
  Papo_T_antigen 11 delylkewptClkkvsseCnCllClLrkkHk 41
                    +  y+k+    l+ +s++  CllC ++   +
      EPX74600.1 39 KLSYIKNNARTLRDPSKH-LCLLCAVNSGTN 68
                    556777777777776655.699999876555 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00025
  Papo_T_antigen  27 seCnCllClLrkkHkek..kkllrkep...lvwieCyCykCyrqWFgldlteevlqlwakii 83 
                     ++C  l+C  + +H+ +  +k+ +++    +v  +C+C+ C ++   ++ +++v++  +++i
      EPX74600.1  77 TNCGYLFCAHNDNHSIThyRKNNKHSVfvnIVTLKCFCFACNMEVLPFEKKNMVIRDVSQFI 138
                     78999****99999755112333333211146779**************9999998888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (826 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1164  (0.0649228); expected 358.6 (0.02)
Passed bias filter:                      451  (0.0251548); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.66u 0.28s 00:00:00.94 Elapsed: 00:00:00.43
# Mc/sec: 5776.19
//
Query:       EPX74601.1  [L=372]
Description: transcription factor TFIID complex subunit Taf4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-55  187.6   6.5    3.9e-55  187.6   6.5    1.5  2  TAF4      Transcription initiation factor TFIID component TAF
  ------ inclusion threshold ------
      0.011   15.6   0.0      0.033   14.1   0.0    1.8  1  DUF1657   Protein of unknown function (DUF1657)
      0.016   14.5   4.2      0.029   13.7   4.2    1.3  1  DUF4407   Domain of unknown function (DUF4407)
      0.062   13.2   4.5       0.13   12.2   4.5    1.5  1  VIT1      VIT family
       0.12   12.1   0.8       0.17   11.6   0.8    1.3  1  RMI1_N    RecQ mediated genome instability protein


Domain annotation for each model (and alignments):
>> TAF4  Transcription initiation factor TFIID component TAF4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   1.0       1.2   4.3e+03     197     241 ..      38      82 ..      33      85 .. 0.51
   2 !  187.6   6.5   1.1e-58   3.9e-55       1     271 [.      87     354 ..      87     367 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 1.2
        TAF4 197 kKkyswmsagsgsgggksgaskssssggkglkgksgviserGkng 241
                 +K + + ++gsgsg+gk +   s     +++ g sg ++++G+++
  EPX74601.1  38 RKPSFGGNQGSGSGAGKLNYGPSRPGNVPSSSGASGNAAATGDRQ 82 
                 555555555555555554433222222224344477777777554 PP

  == domain 2  score: 187.6 bits;  conditional E-value: 1.1e-58
        TAF4   1 LnDvlasaGVdLkeEeerLlqssakeasrvseavravvrsekeepfLqknpLqkklaeiakkeglksidpDvlellSlAveerLrgLltklivlskhRr 99 
                 L+D+l+s+G+ LkeEe +L++s+ ++ +++++++ ++ +++k+ +fL+++ L ++++ i++ ++lks+d D+++l+S+Av++++++Ll+++iv s+hR+
  EPX74601.1  87 LQDALISCGIQLKEEELNLSTSY-YDPASLNTFALSTEDRSKKCDFLNSYTLMQTVSSIVNLHRLKSMDTDIHALISMAVRDYMANLLQRMIVESNHRT 184
                 89******************666.9999*********************************************************************** PP

        TAF4 100 rgekskkrtesltsdvrkqLrelaqkekeeeekrqa....kRieereglekaakdrskgedeeekklkaketakevqkeedekarhraANatAlaavg. 193
                   + +k+ +  + ++vr+ L + a ke+e+ee+r+a    +R+e++++l + +  +++ e+  ++++++++++ +++k+++e+a++r++NatA++++g 
  EPX74601.1 185 ARLDTKN-YS-QLDNVRQVLANSAYKEYESEERRRAvlnvRRAEHEARLAELNT-NANSEEGSSSRRRKEQSSSAAAKNISEDAQNRMTNATASIMAGs 280
                 *999997.56.9******************************************.8888888899999999999999*********************9 PP

        TAF4 194 .eprk.Kkyswmsa....gsg.sgggksgaskssssggkglkgksgviserGknglrlrerergkritlrDllaaLEqerrtsks 271
                   p+  Kkyswm      ++   ggg   ++k++++++         ++ +G   +   + e+   i++rD+la+LE++r+++++
  EPX74601.1 281 aLPSGgKKYSWMATditpAAPaIGGGFGIRKKENNTHKM--------MARDG---TLPVQNEEKGVISIRDALAILEMDREGAGR 354
                 9566669****7542222566455555555555555443........45556...7888999999****************9985 PP

>> DUF1657  Protein of unknown function (DUF1657)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   9.3e-06     0.033      13      41 ..     113     141 ..     112     146 .. 0.91

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 9.3e-06
     DUF1657  13 AtLetFaLqTedeeAKqmYeqaaeqleev 41 
                 A+L tFaL+Ted + K  + +  + ++ v
  EPX74601.1 113 ASLNTFALSTEDRSKKCDFLNSYTLMQTV 141
                 89*****************9999999987 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   4.2   8.1e-06     0.029     110     221 ..     185     291 ..     184     326 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 8.1e-06
     DUF4407 110 aelaeeqqeeakelkeqlaaaltaelaeleaqiaalqaeidaaearldalraeaqkeldgtkgtgttgvaGkgpaakekkaqldaaqaelaelkaklda 208
                 a+l++++ ++ + +++ la+++ +e++ +e+++a l+   ++ earl++l+++a++e     ++   +++ +  +  ++k+  ++aq+++++++a++ a
  EPX74601.1 185 ARLDTKNYSQLDNVRQVLANSAYKEYESEERRRAVLNVRRAEHEARLAELNTNANSEEGS--SS---RRRKEQSSSAAAKNISEDAQNRMTNATASIMA 278
                 6889999999999999***************************************99553..33...36677888888999***************999 PP

     DUF4407 209 tarlaalraelae 221
                 +++l++  ++++ 
  EPX74601.1 279 GSALPSGGKKYSW 291
                 9998888777765 PP

>> VIT1  VIT family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   4.5   3.5e-05      0.13      46     135 ..     161     254 ..     158     284 .. 0.61

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 3.5e-05
        VIT1  46 iSMgiGeYlsvkserdlekaerkreeeeleedpe.egeaeelaeilearglseelaqevaaellknpdallelmlr.......eelgpsaseelaspl 135
                 iSM++ +Y++   +r + +++ +  + + +++++ +     ++++l++   +e +++e  + +l+ ++a  e+ l+        e+g s++++++++ 
  EPX74601.1 161 ISMAVRDYMANLLQRMIVESNHRTARLDTKNYSQlD----NVRQVLANSAYKEYESEERRRAVLNVRRAEHEARLAelntnanSEEGSSSRRRKEQSS 254
                 9***********************999999998554....5555555555555555554444444444433333331112222344433333332222 PP

>> RMI1_N  RecQ mediated genome instability protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.8   4.7e-05      0.17      30     146 ..     142     269 ..     116     329 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 4.7e-05
      RMI1_N  30 sallktvleqlLasDltes.tnsssvlpaniaeqrksesspa...lkgpvvvQvldiedi.gsSaysqlealeavergeetrgrevirt....esaaaa 119
                 s++++  + + + +D+ ++ ++++    an+ ++   es+ +   l+ +   Q+++++ + ++Say+ +e+ e+++   ++r  e + +    + ++a+
  EPX74601.1 142 SSIVNLHRLKSMDTDIHALiSMAVRDYMANLLQRMIVESNHRtarLDTKNYSQLDNVRQVlANSAYKEYESEERRRAVLNVRRAEHEARlaelN-TNAN 239
                 5555556666677777777633344444555444444444445679999999*****997699********99977777777777666687541.3333 PP

      RMI1_N 120 sakadeenseekeeaqats...seskkrrm 146
                 s++ ++++++++++ +a++   se+ ++rm
  EPX74601.1 240 SEEGSSSRRRKEQSSSAAAkniSEDAQNRM 269
                 333333332222222222244544444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (372 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1319  (0.073568); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.55u 0.23s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 2723.05
//
Query:       EPX74602.1  [L=424]
Description: SWI/SNF and RSC complex subunit Ssr3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.6e-23   80.6   0.0    1.9e-22   78.9   0.0    2.0  1  SWIB      SWIB/MDM2 domain


Domain annotation for each model (and alignments):
>> SWIB  SWIB/MDM2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.9   0.0   1.1e-26   1.9e-22       1      74 []     203     275 ..     203     275 .. 0.96

  Alignments for each domain:
  == domain 1  score: 78.9 bits;  conditional E-value: 1.1e-26
        SWIB   1 kpvklspeLaellgekelsrpevvkklweYIkennLqdpedkreilcDekLkklfggkdrvkffempkllkkHl 74 
                 +++kls++ a+ll +ke +rp +v +lw+YIk + Lqd e+kr i+cD+ L++lf+ +dr++f+ +p+l++++l
  EPX74602.1 203 ERYKLSSAFANLLAIKEGTRPTIVTALWQYIKFHRLQDMEEKRLINCDKGLRNLFE-TDRLYFPRIPELMNRFL 275
                 589****************************************************6.58***********9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (424 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1199  (0.0668749); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.44
# Mc/sec: 2919.11
//
Query:       EPX74603.1  [L=421]
Description: 19S proteasome regulatory subunit Rpn6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      2e-38  131.4   3.3      2e-38  131.4   3.3    2.2  2  RPN6_N        26S proteasome regulatory subunit RPN6 N-termin
    2.2e-21   76.4   0.3    3.4e-20   72.5   0.1    3.0  3  PCI           PCI domain
    1.5e-12   47.0   0.3    3.7e-12   45.7   0.3    1.7  1  RPN6_C_helix  26S proteasome subunit RPN6 C-terminal helix do
     0.0092   15.9   3.0       0.81    9.9   0.0    4.5  4  TPR_7         Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.012   16.4   0.8        1.2   10.2   0.0    3.9  4  TPR_14        Tetratricopeptide repeat
      0.013   15.4   0.4      0.038   13.9   0.4    1.8  1  FadR_C        FadR C-terminal domain
      0.014   16.0   2.8        3.7    8.3   0.1    4.0  3  TPR_16        Tetratricopeptide repeat
      0.046   13.5   1.5        0.2   11.5   0.1    2.3  2  Baculo_p24    Baculovirus P24 capsid protein
        0.1   12.7   6.4        6.2    7.2   0.5    4.4  3  TPR_2         Tetratricopeptide repeat
       0.24   11.9   8.7        1.9    9.1   0.1    5.1  7  TPR_19        Tetratricopeptide repeat
       0.29   11.4  10.3          2    8.8   0.2    4.4  4  TPR_12        Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> RPN6_N  26S proteasome regulatory subunit RPN6 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.4   3.3   1.2e-41     2e-38       3     117 .]      13     127 ..      11     127 .. 0.98
   2 ?   -2.0   0.1       2.8   4.6e+03      38      72 ..     152     185 ..     135     194 .. 0.50

  Alignments for each domain:
  == domain 1  score: 131.4 bits;  conditional E-value: 1.2e-41
      RPN6_N   3 elaksdpkeaeelykeilskkskedeealreqeqalleLgelyrdqkkaeeLaelikesrsflssiaKaKtaKlvrtLldlfskipnslelqievlkes 101
                 el++++ ++ae++y+eil+k+ k+d++ ++eqeqa++ L++ly +++++e+La++++e+r+++s+++KaK+aK++rtL+d+fs  ++sl+lqiev+k++
  EPX74603.1  13 ELKSKNFAKAEAIYREILQKNVKKDDSLINEQEQAMVGLSDLYVAENRHEDLAKFVQEVRPLMSNFSKAKSAKIIRTLIDKFSGAKSSLHLQIEVTKSC 111
                 67889********************************************************************************************** PP

      RPN6_N 102 iewakeekriFLrqsL 117
                  ewa eekr+FLrq+L
  EPX74603.1 112 REWAVEEKRTFLRQAL 127
                 **************97 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 2.8
      RPN6_N  38 lleLgelyrdqkkaeeLaelikesrsflssiaKaK 72 
                 l+eL ++  d+   +e+  l +++ + + +i+Ka+
  EPX74603.1 152 LFELKKM-DDKMLLTEVHLLESKVYHAIRNIPKAR 185
                 3333333.333333444444445555555555555 PP

>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0       1.1   1.8e+03      14      25 ..      63      74 ..      13     134 .. 0.65
   2 ?   -1.4   0.0         2   3.3e+03      89     104 ..     203     218 ..     201     219 .. 0.87
   3 !   72.5   0.1   2.1e-23   3.4e-20       2     103 ..     284     385 ..     283     387 .. 0.98

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 1.1
                SHHHHHHHHHHH CS
         PCI 14 nlsgfseelkdl 25
                +l++f +e++ l
  EPX74603.1 63 DLAKFVQEVRPL 74
                344444444444 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 2
                 SSSEEEETTTTEEEEC CS
         PCI  89 eirakidqesgivvfk 104
                  ++a++d +sgi++ +
  EPX74603.1 203 ALQASLDMQSGILHAE 218
                 589*********9876 PP

  == domain 3  score: 72.5 bits;  conditional E-value: 2.1e-23
                 HHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCESEEEHHHHHHHHTSSHHHHHHHHHHHHHTTSSSEEEETTTTE CS
         PCI   2 sysdllkalrsgnlsgfseelkdleeelladdglaqllesLekkvrerllrqvskiyssislerlaklldlsvdevEkilvklIrdgeirakidqesgi 100
                 +++++ +a ++++l++f+++l+d+++el  d+ ++ +l+ L++++ e++l +v+++ys+i+++++a+ ++ls+ +vE  l+++I d+ +++ +dq sgi
  EPX74603.1 284 AMRAVAQAHENRSLADFEKALQDFKQELASDPIIRSHLSTLYDNLLEQNLLRVVEPYSRIEVSHIANVIGLSTVQVEGKLSQMILDKVFYGILDQGSGI 382
                 689999********************************************************************************************* PP

                 EEE CS
         PCI 101 vvf 103
                 +++
  EPX74603.1 383 LIV 385
                 *98 PP

>> RPN6_C_helix  26S proteasome subunit RPN6 C-terminal helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.7   0.3   2.3e-15   3.7e-12       1      26 [.     391     416 ..     391     417 .. 0.94

  Alignments for each domain:
  == domain 1  score: 45.7 bits;  conditional E-value: 2.3e-15
  RPN6_C_helix   1 kDktYeaALeTIknmgkVVDsLYeKA 26 
                   +DktYeaALe+Iknmg+VVD+L e+ 
    EPX74603.1 391 QDKTYEAALEVIKNMGTVVDLLIENK 416
                   8*********************9985 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.94   1.5e+03      14      26 ..      18      30 ..      14      39 .. 0.80
   2 ?    0.2   0.0      0.62     1e+03       5      21 ..      51      67 ..      47      71 .. 0.83
   3 ?    1.1   0.1      0.31     5e+02       6      22 ..     213     229 ..     211     243 .. 0.85
   4 !    9.9   0.0    0.0005      0.81       6      32 ..     289     315 ..     284     318 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.94
       TPR_7 14 dyeeAielyeqsL 26
                ++++A+ +y++ L
  EPX74603.1 18 NFAKAEAIYREIL 30
                799******9966 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.62
       TPR_7  5 LarlysrlGdyeeAiel 21
                L +ly++++++e+++++
  EPX74603.1 51 LSDLYVAENRHEDLAKF 67
                7899*********9987 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.31
       TPR_7   6 arlysrlGdyeeAiely 22 
                 + l+ ++ d+++A +++
  EPX74603.1 213 GILHAEEADFKTAYSYF 229
                 678999*********98 PP

  == domain 4  score: 9.9 bits;  conditional E-value: 0.0005
       TPR_7   6 arlysr..lGdyeeAielyeqsLaltkdp 32 
                 a+++++  l d+e+A++ ++q  +l++dp
  EPX74603.1 289 AQAHENrsLADFEKALQDFKQ--ELASDP 315
                 78888888*************..999987 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   0.00071       1.2       6      32 ..       8      34 ..       4      44 .. 0.85
   2 ?   -2.0   0.0       5.8   9.4e+03       6      25 ..     130     149 ..     125     152 .. 0.81
   3 ?   -1.4   0.0       3.7   6.1e+03       9      29 ..     214     234 ..     208     247 .. 0.77
   4 ?    1.0   0.1      0.65   1.1e+03       3      26 ..     284     309 ..     282     316 .. 0.65

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00071
      TPR_14  6 alaeallalGdpdeAiallrralalaP 32
                +la a+l + ++++A+a++r++l+++ 
  EPX74603.1  8 ELAGAELKSKNFAKAEAIYREILQKNV 34
                6999********************984 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 5.8
      TPR_14   6 alaeallalGdpdeAiallr 25 
                 +l ++++++  + +Ai+l +
  EPX74603.1 130 KLISLYYENSSYTDAINLTN 149
                 57889999999999999866 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 3.7
      TPR_14   9 eallalGdpdeAiallrrala 29 
                  ++++  d+++A  ++ +a +
  EPX74603.1 214 ILHAEEADFKTAYSYFYEAYE 234
                 677888899999988888755 PP

  == domain 4  score: 1.0 bits;  conditional E-value: 0.65
      TPR_14   3 allalaealla..lGdpdeAiallrr 26 
                 a +a a+a+++  l d+++A++ +++
  EPX74603.1 284 AMRAVAQAHENrsLADFEKALQDFKQ 309
                 56677777765226788888876665 PP

>> FadR_C  FadR C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.4   2.3e-05     0.038       9      91 ..     167     267 ..     160     278 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 2.3e-05
      FadR_C   9 lniletlirldedkvpelvedllsaRtnisaiyireavknnpeks..................levlaevkeledkaeafaefDYklfrelafasgnki 89 
                 +++le+ +     ++p+  + l +aRt   aiy ++a++++ +                     e+ + +++l+d ++a+++f Y+l  ++ ++s  ++
  EPX74603.1 167 VHLLESKVYHAIRNIPKARASLTAARTAANAIYCPAALQASLDMQsgilhaeeadfktaysyfYEAYEGYNTLDDVKKALSSFKYMLLSQIMLNSISEV 265
                 67788888888889999999*******************9988877999**********99999999999******************99999887766 PP

      FadR_C  90 Yv 91 
                   
  EPX74603.1 266 KS 267
                 55 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.1    0.0023       3.7       2      50 ..       8      61 ..       7      72 .. 0.70
   2 ?    2.7   0.0      0.13   2.1e+02       3      25 ..     131     153 ..     129     198 .. 0.62
   3 ?    2.3   0.2      0.17   2.7e+02       2      31 ..     289     315 ..     284     334 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0023
      TPR_16  2 alaraalragdyddAaaaleaalkrdpssPd.....aaeAllllgdaalrqgrl 50
                +la a l+++++++A+a +++ l ++ +  d       +A+ +l d++ + +r+
  EPX74603.1  8 ELAGAELKSKNFAKAEAIYREILQKNVKKDDslineQEQAMVGLSDLYVAENRH 61
                6899999************87777764444445665566666666666555555 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.13
      TPR_16   3 laraalragdyddAaaaleaalk 25 
                 l  +++++  y+dA+++ ++ l 
  EPX74603.1 131 LISLYYENSSYTDAINLTNTILF 153
                 55678999999999988766654 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.17
      TPR_16   2 alaraalragdyddAaaaleaalkrdpssP 31 
                 a+a++ + + d+++A+  +++ l++d   P
  EPX74603.1 289 AQAHENRSLADFEKALQDFKQELASD---P 315
                 67888888889999999999999999...6 PP

>> Baculo_p24  Baculovirus P24 capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.2      0.27   4.4e+02      97     161 ..      38     105 ..      20     158 .. 0.68
   2 ?   11.5   0.1   0.00012       0.2     108     174 ..     237     314 ..     231     320 .. 0.82

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.27
  Baculo_p24  97 DLlvGaqseavdplkdi...ktqlctlqecleesnvlvnsttesssnenieslreilrseeasllsnl 161
                 D l+++q++a+  l+d+   ++++++l + ++e   l+++ ++++s++ i++l ++   +++sl+ ++
  EPX74603.1  38 DSLINEQEQAMVGLSDLyvaENRHEDLAKFVQEVRPLMSNFSKAKSAKIIRTLIDKFSGAKSSLHLQI 105
                 66777788877777776222345555655555544433333333334555655555555555555444 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 0.00012
  Baculo_p24 108 dplkdiktqlctlqecleesnvlvn..........sttesssnenieslreilrseeasllsnlnsllesiks.lqad 174
                 + l+d+k+ l + + +l ++ +l +          +++ + s++ ie +r + +++e+  l++++++l+ +k+ l +d
  EPX74603.1 237 NTLDDVKKALSSFKYMLLSQIMLNSisevkslltgKHSAKYSGRDIEAMRAVAQAHENRSLADFEKALQDFKQeLASD 314
                 7899**********999988765558888777755444444469****************************977776 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.5    0.0038       6.2       6      31 ..       8      33 ..       4      33 .. 0.88
   2 ?    0.2   0.0      0.67   1.1e+03       2      27 ..     166     191 ..     165     195 .. 0.86
   3 ?    4.5   0.2     0.028        45      14      32 ..     297     315 ..     287     316 .. 0.80

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0038
       TPR_2  6 nlGlayyklgdyeeAleafekAleld 31
                +l+ a +k++++++A++ +++ l+ +
  EPX74603.1  8 ELAGAELKSKNFAKAEAIYREILQKN 33
                6788899**************99976 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.67
       TPR_2   2 ealynlGlayyklgdyeeAleafekA 27 
                 e++    ++y +  +  +A++ + +A
  EPX74603.1 166 EVHLLESKVYHAIRNIPKARASLTAA 191
                 56778889999*********999887 PP

  == domain 3  score: 4.5 bits;  conditional E-value: 0.028
       TPR_2  14 lgdyeeAleafekAleldP 32 
                 l d+e+Al++f++ l+ dP
  EPX74603.1 297 LADFEKALQDFKQELASDP 315
                 6689999999999888776 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.1    0.0012       1.9      26      57 ..       4      35 ..       2      42 .. 0.85
   2 ?    8.9   0.2    0.0013       2.2       2      42 ..      14      62 ..      13      63 .. 0.82
   3 ?    0.7   0.0      0.47   7.7e+02      31      55 ..     131     155 ..     124     165 .. 0.82
   4 ?    1.3   0.0      0.31   5.1e+02      25      53 ..     165     193 ..     135     206 .. 0.65
   5 ?   -0.5   0.0       1.2   1.9e+03       3      23 ..     218     238 ..     216     250 .. 0.79
   6 ?   -1.2   0.0       1.9   3.1e+03       6      22 ..     299     315 ..     285     326 .. 0.75
   7 ?   -2.8   0.0       5.7   9.4e+03       5      17 ..     393     405 ..     391     408 .. 0.76

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.0012
      TPR_19 26 earllLAeallalgqldeAealLdalpeedpd 57
                +a + LA a l+++++++Aea+  ++++++ +
  EPX74603.1  4 NASIELAGAELKSKNFAKAEAIYREILQKNVK 35
                567789****************9999988765 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0013
      TPR_19  2 laegdyaeAlalleqalqedpk........naearllLAeallalgqld 42
                l+++++a A a+++++lq++ k        ++ a  +L ++++a ++ +
  EPX74603.1 14 LKSKNFAKAEAIYREILQKNVKkddslineQEQAMVGLSDLYVAENRHE 62
                67899************9955555556666999999*******999987 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.47
      TPR_19  31 LAeallalgqldeAealLdalpeed 55 
                 L+ +++++  +++A++l ++++ e 
  EPX74603.1 131 LISLYYENSSYTDAINLTNTILFEL 155
                 6778999999999999999998665 PP

  == domain 4  score: 1.3 bits;  conditional E-value: 0.31
      TPR_19  25 aearllLAeallalgqldeAealLdalpe 53 
                  e+ ll  +++ a  ++ +A+a L a+  
  EPX74603.1 165 TEVHLLESKVYHAIRNIPKARASLTAART 193
                 34555557888888999999999987765 PP

  == domain 5  score: -0.5 bits;  conditional E-value: 1.2
      TPR_19   3 aegdyaeAlalleqalqedpk 23 
                 +e d+  A +++ +a++ ++ 
  EPX74603.1 218 EEADFKTAYSYFYEAYEGYNT 238
                 6779999*****999998765 PP

  == domain 6  score: -1.2 bits;  conditional E-value: 1.9
      TPR_19   6 dyaeAlalleqalqedp 22 
                 d++ Al+ ++q l+ dp
  EPX74603.1 299 DFEKALQDFKQELASDP 315
                 56667777777665555 PP

  == domain 7  score: -2.8 bits;  conditional E-value: 5.7
      TPR_19   5 gdyaeAlalleqa 17 
                 + y++Al+  +++
  EPX74603.1 393 KTYEAALEVIKNM 405
                 6799999988887 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.2    0.0012         2       7      62 ..       7      62 ..       3      76 .. 0.75
   2 ?    1.8   1.4      0.18   2.9e+02      12      75 ..     174     236 ..     172     238 .. 0.64
   3 ?    2.6   0.2      0.11   1.7e+02       8      36 ..     211     239 ..     204     249 .. 0.76
   4 ?    2.7   0.1     0.099   1.6e+02      45      73 ..     282     312 ..     274     315 .. 0.73

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0012
      TPR_12  7 nnlaavlrrlgrydeAlellekaleiarrllGpdh..pltattlrnLgrlyralgrye 62
                 +la ++++ +++++A++++++ l+   +   +d+   +  +++ +L++ly a +r+e
  EPX74603.1  7 IELAGAELKSKNFAKAEAIYREILQKNVKK--DDSliNEQEQAMVGLSDLYVAENRHE 62
                469999999999999999999998877666..44433566677777777777777776 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.18
      TPR_12  12 vlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealaia 75 
                 v+++  +  +A++ l +a+ +a++++ +  +l a+     g+l+ +  +++ A +++ ea++ +
  EPX74603.1 174 VYHAIRNIPKARASLTAARTAANAIY-CPAALQASLDMQSGILHAEEADFKTAYSYFYEAYEGY 236
                 56666667777777777777777766.3344555555556777777777777777777777766 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.11
      TPR_12   8 nlaavlrrlgrydeAlellekaleiarrl 36 
                 + + ++++  ++  A +++ +a+e ++ l
  EPX74603.1 211 QSGILHAEEADFKTAYSYFYEAYEGYNTL 239
                 56777888889999999999999988655 PP

  == domain 4  score: 2.7 bits;  conditional E-value: 0.099
      TPR_12  45 attlrnLgrly..ralgryeeAlelleeala 73 
                 ++++r+ ++++  r l ++e+Al+ +++ la
  EPX74603.1 282 IEAMRAVAQAHenRSLADFEKALQDFKQELA 312
                 5677777777533577999999999988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (421 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1150  (0.0641419); expected 358.6 (0.02)
Passed bias filter:                      576  (0.0321267); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 2845.28
//
Query:       EPX74604.1  [L=985]
Description: serine protease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.2e-41  137.9   0.0      2e-30  104.6   0.0    2.8  2  PDZ_1          PDZ-like domain
      2e-22   80.7   0.3    1.3e-17   65.1   0.0    3.0  3  Trypsin_2      Trypsin-like peptidase domain
    1.2e-14   54.4   0.9    5.2e-06   26.7   0.0    3.7  3  PDZ_2          PDZ domain
    4.5e-14   52.0   0.3    0.00029   20.6   0.0    3.6  3  PDZ_6          PDZ domain
    2.8e-08   34.0   0.5      0.041   14.2   0.0    4.2  4  PDZ            PDZ domain
     0.0048   16.7   0.0      0.011   15.5   0.0    1.6  1  Peptidase_S7   Peptidase S7, Flavivirus NS3 serine protease
     0.0099   15.8   0.4        5.8    7.0   0.0    2.9  3  Tricorn_PDZ    Tricorn protease PDZ domain
  ------ inclusion threshold ------
      0.058   12.9   0.0      0.086   12.4   0.0    1.2  1  DUF31          Putative peptidase (DUF31)
      0.093   11.4   0.1       0.16   10.6   0.1    1.2  1  Peptidase_S46  Peptidase S46
       0.16   12.1   0.1         21    5.4   0.0    2.8  2  YcgR_2         Flagellar protein YcgR


Domain annotation for each model (and alignments):
>> PDZ_1  PDZ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.6   0.0   1.1e-33     2e-30       1      78 []     365     441 ..     365     441 .. 0.98
   2 !   30.4   0.0   1.7e-10     3e-07       4      78 .]     837     912 ..     834     912 .. 0.91

  Alignments for each domain:
  == domain 1  score: 104.6 bits;  conditional E-value: 1.1e-33
       PDZ_1   1 aitpsrfvevaGatfhdLsyqlarsyaipvkgvyvseasgsfklsskekkgviitsinnqptpnLdefievvkkipdn 78 
                 +i p+r+vev+Ga fh+Lsyqlar+ya+pvkgv++se++gsf+l++  +  ++++s++ +p+pnLd+fiev+k+ipd+
  EPX74604.1 365 DIAPDRYVEVCGAKFHNLSYQLARQYALPVKGVFISEPAGSFRLEG-PEYCYLLESVAYKPVPNLDAFIEVMKTIPDR 441
                 699*****************************************88.9999*************************96 PP

  == domain 2  score: 30.4 bits;  conditional E-value: 1.7e-10
       PDZ_1   4 psrfvevaGatfhdLsyqlarsya..ipvkgvyvseasgsfklsskekkgviitsinnqptpnLdefievvkkipdn 78 
                 ++r++   Gat ++ +++++r     +p+++ ++++++gs++ ++      +it in+ pt +L+ f++ v+k++dn
  EPX74604.1 837 TNRVIICWGATIQA-PHRAVRLQSegLPSNVFVTNRSRGSPADQYDLGIAQFITAINGIPTLDLESFVREVRKVQDN 912
                 67888899******.******98622677799******************************************997 PP

>> Trypsin_2  Trypsin-like peptidase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.1   0.0     7e-21   1.3e-17       1     150 []      77     223 ..      77     223 .. 0.87
   2 !   12.3   0.0   0.00014      0.24      36     150 .]     572     691 ..     544     691 .. 0.73
   3 ?   -1.1   0.0       1.7   3.1e+03      12      30 ..     783     809 ..     774     916 .. 0.54

  Alignments for each domain:
  == domain 1  score: 65.1 bits;  conditional E-value: 7e-21
   Trypsin_2   1 GsGflvgsd.glilTnaHvvdsadgaavkaikkkveeagadgrevpakvvaadpelDlAllkv..ssderaglpplplgpsealkggepvyvvGyplgg 96 
                 +s+f+v++  g++lTn+Hvv     + +        ++ ++ +ev++ +v++dp +D+ +l++  +  +  +++ l+l+p+ a  +g ++ v+G+ +  
  EPX74604.1  77 ASAFIVDAKnGYMLTNRHVVCAGPFVGH--------AILDNHEEVEVYPVYRDPVHDFGFLRFdpKRIRYMNVEQLELRPDLAK-VGAEIRVIGN-DAA 165
                 589999988579********99999999........89*************************887888888888889996655.555*******.888 PP

   Trypsin_2  97 eksgsvssGivsgvve.....sesaasgegesflqtdaatspGsSGGplfdsdGrvvGl 150
                 ek  s+ +G +s+v++     +e      +++++q++a  s+GsSG+p++ ++G+vv+l
  EPX74604.1 166 EKL-SILAGWISRVDRnvpdyGELTYCDFNTNYIQAAANASGGSSGSPVVERNGNVVAL 223
                 888.************87776555555556677799999999***************97 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 0.00014
   Trypsin_2  36 eagadgrevpakvvaadpelDlAllkv..ssderaglpplplgpsealkggepvyvvGyplggeksgsvssGivsgvve.sesaasgegesfl...qtd 128
                 ++ ad  + pa+v++ +p   l+++k   +   ++++ +++l++   ++g+ +v  +G+ +++     +++ +v++v       +++++ + +     +
  EPX74604.1 572 ITVADSIQIPAEVLHLHPTQNLTFIKYdpKLLGETPIKAAELRNYYVSQGD-NVNFFGFNSKSRV--VATRTSVTDVITmVIPPNPMPRFRAVnfeSIT 667
                 56789999*********999*******988899999999999998755555.*******444444..99999999999995555555555555555666 PP

   Trypsin_2 129 a.atspGsSGGplfd.sdGrvvGl 150
                 + +  + + G+ ++  ++G+vv+l
  EPX74604.1 668 IeSGLGSQCGSGVLTdDEGKVVAL 691
                 624445556999997699****97 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 1.7
   Trypsin_2  12 ilTnaHvvdsadgaav........kai 30 
                 +lT   v+ sa+g++v        +  
  EPX74604.1 783 VLTDGDVILSANGKPVtrvqdieaEDV 809
                 788888887777777744443333222 PP

>> PDZ_2  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   0.0   2.9e-09   5.2e-06      13      79 ..     293     357 ..     273     360 .. 0.84
   2 !   13.4   0.1   4.1e-05     0.073      13      54 ..     768     806 ..     750     828 .. 0.78
   3 !   10.5   0.0   0.00033      0.59      15      68 ..     865     918 ..     854     924 .. 0.89

  Alignments for each domain:
  == domain 1  score: 26.7 bits;  conditional E-value: 2.9e-09
                 ..-EEEEEE-TTSGGGGT.--TT-EEEEETTB--SSHHHHHHHHHTS-TT-EEEEEEEETTEEEEEE CS
       PDZ_2  13 tggvlvvsVkeggPaakaglkagDvilkvdgkkvksledlislllkkkpGdtVkltvlRdgkkktve 79 
                 t+ ++v +V ++gP++++ l+ gD++l++++k + +l +l+s +l  ++G+++ ltv+R+++k +v+
  EPX74604.1 293 TSMLVVETVLPEGPSHNK-LHEGDILLHLNSKYLIDLIELES-ILDESIGQDIVLTVQRGNNKVDVT 357
                 56778888******9999.********************986.7789**************999886 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 4.1e-05
                 ..-EEEEEE-TTSGGGGT.--TT-EEEEETTB--SSHHHHHH CS
       PDZ_2  13 tggvlvvsVkeggPaakaglkagDvilkvdgkkvksledlis 54 
                  +   +++V+ ++P   + l  gDvil+++gk+v+  +d++ 
  EPX74604.1 768 HQLFMITHVEANTP---RVLTDGDVILSANGKPVTRVQDIEA 806
                 5677899*******...77***************99888774 PP

  == domain 3  score: 10.5 bits;  conditional E-value: 0.00033
                 -EEEEEE-TTSGGGGT.--TT-EEEEETTB--SSHHHHHHHHHTS-TT-EEEEE CS
       PDZ_2  15 gvlvvsVkeggPaakaglkagDvilkvdgkkvksledlislllkkkpGdtVklt 68 
                  v v++   g+Pa++ +l +   i++++g +  +le++ ++++k + ++ V+++
  EPX74604.1 865 NVFVTNRSRGSPADQYDLGIAQFITAINGIPTLDLESFVREVRKVQDNSYVRVS 918
                 6778888899**************************************999985 PP

>> PDZ_6  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   1.6e-07   0.00029       1      56 []     297     349 ..     297     349 .. 0.98
   2 !   11.7   0.1   9.6e-05      0.17      18      38 ..     786     804 ..     784     806 .. 0.87
   3 !   15.6   0.0     6e-06     0.011       1      43 [.     867     907 ..     867     918 .. 0.87

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 1.6e-07
       PDZ_6   1 vVtaVdpgsPAdrAGlrvGDiilsvNGqpveglsladvaallrgsagesvvlvvrr 56 
                 vV++V p++P  +  l  GDi+l +N + +   +l ++ ++l +s g+ +vl+v+r
  EPX74604.1 297 VVETVLPEGPSHNK-LHEGDILLHLNSKYL--IDLIELESILDESIGQDIVLTVQR 349
                 699**********8.***************..***********************9 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 9.6e-05
       PDZ_6  18 vGDiilsvNGqpveglsladv 38 
                  GD+ils NG+pv  + ++d+
  EPX74604.1 786 DGDVILSANGKPV--TRVQDI 804
                 6************..988886 PP

  == domain 3  score: 15.6 bits;  conditional E-value: 6e-06
       PDZ_6   1 vVtaVdpgsPAdrAGlrvGDiilsvNGqpveglsladvaallr 43 
                 +Vt    gsPAd+  l +   i+++NG+p+  l+l+ +++ +r
  EPX74604.1 867 FVTNRSRGSPADQYDLGIAQFITAINGIPT--LDLESFVREVR 907
                 6888899***********************..**999988777 PP

>> PDZ  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.0   2.3e-05     0.041       8      62 ..     271     329 ..     264     347 .. 0.83
   2 ?   -1.9   0.0       2.5   4.4e+03       8      35 ..     623     647 ..     619     653 .. 0.69
   3 !    9.5   0.1   0.00067       1.2      44      67 ..     784     807 ..     756     812 .. 0.76
   4 ?    4.8   0.0      0.02        36      26      56 ..     864     897 ..     846     921 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.3e-05
                 TTSESSEEEEEETTSS.....SSSSEEEEEECTTSHHHHHTSSTTEEEEEETTEETTTSH CS
         PDZ   8 grgglGfslkggsdqr.....gdkgifvsevlpggaaeadglkvGDkIlsvNgvdvenvs 62 
                 ++++lG+  + ++  r     +   ++v  vlp g+ + + l++GD++l  N + + ++ 
  EPX74604.1 271 ECSRLGLDTAIEEQVRglfpgATSMLVVETVLPEGPSHNK-LHEGDILLHLNSKYLIDLI 329
                 678888888888887788887788899*************.***********98776665 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 2.5
                 TTSESSEEEEEETTSSSSSSEEEEEECT CS
         PDZ   8 grgglGfslkggsdqrgdkgifvsevlp 35 
                 + +++Gf+ k+   +   +   v++v  
  EPX74604.1 623 NVNFFGFNSKSRVVA---TRTSVTDVIT 647
                 567888988887776...5777777654 PP

  == domain 3  score: 9.5 bits;  conditional E-value: 0.00067
                 SSTTEEEEEETTEETTTSHHHHHH CS
         PDZ  44 lkvGDkIlsvNgvdvenvsheeav 67 
                 l  GD+Ils Ng++v+ v++ ea 
  EPX74604.1 784 LTDGDVILSANGKPVTRVQDIEAE 807
                 556**************9998886 PP

  == domain 4  score: 4.8 bits;  conditional E-value: 0.02
                 SSEEEEEECTT.SHHHHHTSSTTEEEEEETT...E CS
         PDZ  26 kgifvsevlpg.gaaeadglkvGDkIlsvNg...v 56 
                  ++fv++ ++g +a++ d l +   I+++Ng    
  EPX74604.1 864 SNVFVTNRSRGsPADQYD-LGIAQFITAINGiptL 897
                 489********5555555.************4443 PP

>> Peptidase_S7  Peptidase S7, Flavivirus NS3 serine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   6.2e-06     0.011      86     117 ..     197     228 ..     166     236 .. 0.87

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 6.2e-06
                   EEEEXXXXXTT-TTSEEE-TTSXEEEECEEEE CS
  Peptidase_S7  86 lgitdlnlssGsSGSlvlnqnkqivgiYfatv 117
                   ++  + n s+GsSGS+v+ +n+++v +  ++ 
    EPX74604.1 197 YIQAAANASGGSSGSPVVERNGNVVALQAGGH 228
                   56678999*****************9977765 PP

>> Tricorn_PDZ  Tricorn protease PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.0   0.0    0.0032       5.8      40      84 ..     311     354 ..     307     358 .. 0.89
   2 !    5.7   0.0    0.0082        15      41      62 ..     785     806 ..     781     824 .. 0.88
   3 ?   -3.1   0.0       4.5   8.1e+03      44      56 ..     886     898 ..     875     917 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0032
                  -.TT-EEEEETTEE-BTTB-HHHHHHTTTTSEEEEEEE-STT-EE CS
  Tricorn_PDZ  40 vreGdlilavdgepvskekgiaelLvgkagkeveLtvkrkdgkar 84 
                  ++eGd++l+++ + +    +++++L +  g+++ Ltv+r+++ + 
   EPX74604.1 311 LHEGDILLHLNSKYLIDLIELESILDESIGQDIVLTVQRGNN-KV 354
                  689************************************664.33 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0082
                  .TT-EEEEETTEE-BTTB-HHH CS
  Tricorn_PDZ  41 reGdlilavdgepvskekgiae 62 
                    Gd+il+ +g+pv+++++i+ 
   EPX74604.1 785 TDGDVILSANGKPVTRVQDIEA 806
                  58****************9975 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 4.5
                  -EEEEETTEE-BT CS
  Tricorn_PDZ  44 dlilavdgepvsk 56 
                  + i+a++g p+  
   EPX74604.1 886 QFITAINGIPTLD 898
                  67999**998755 PP

>> DUF31  Putative peptidase (DUF31)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   4.8e-05     0.086     330     369 ..     183     222 ..     157     226 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 4.8e-05
       DUF31 330 snykekkytnyGlgyllkssalagGaSGSlvrnkdnklvG 369
                   y e +y  +  +y+    + +gG+SGS+v+  ++++v+
  EPX74604.1 183 PDYGELTYCDFNTNYIQAAANASGGSSGSPVVERNGNVVA 222
                 4677889999999************************998 PP

>> Peptidase_S46  Peptidase S46
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.1   8.8e-05      0.16     627     656 ..     200     229 ..     181     238 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 8.8e-05
                    ES----TT-TT-EEE-TTS-EEEEEEEE-G CS
  Peptidase_S46 627 stnDitGGNSGSPvlngkgelvGlaFDgni 656
                    + ++  GG SGSPv++++g++v l   g +
     EPX74604.1 200 AAANASGGSSGSPVVERNGNVVALQAGGHM 229
                    456789****************99888766 PP

>> YcgR_2  Flagellar protein YcgR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0     0.046        82       2      34 ..     339     374 ..     338     376 .. 0.89
   2 ?    5.4   0.0     0.012        21      37      77 ..     607     650 ..     597     652 .. 0.82

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.046
                 TTSEEEEEEEETTEEEEEEEEEE...EE.-TTEEEE CS
      YcgR_2   2 iGdkveieiesgdgekryksrvv...dikgddylii 34 
                 iG+ + + ++ g+ + ++++rv+   di +d+y+ +
  EPX74604.1 339 IGQDIVLTVQRGNNKVDVTCRVQsthDIAPDRYVEV 374
                 9*********************98888889998876 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.012
                 EEET..-SB----TT-EEEEEEE-T.SSEEEEEEEEEEEEETTC CS
      YcgR_2  37 Piee..grlvplregtevevrfise.ggvyaFrsrvlgrikdpi 77 
                 Pi+    r +++ +g++v+   +++ + v+a r++v+++i+  i
  EPX74604.1 607 PIKAaeLRNYYVSQGDNVNFFGFNSkSRVVATRTSVTDVITMVI 650
                 555533455999********999965*************98655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (985 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       422  (0.0235373); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.70u 0.28s 00:00:00.98 Elapsed: 00:00:00.44
# Mc/sec: 6731.33
//
Query:       EPX74605.1  [L=239]
Description: hypothetical protein SOCG_02088 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       521  (0.0290591); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1724.73
//
Query:       EPX74606.1  [L=239]
Description: transcription factor TFIIF complex subunit Tfg3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-10   40.8   0.1    3.1e-10   39.9   0.1    1.5  1  YEATS     YEATS family
    2.5e-07   30.7   0.2    4.5e-07   29.9   0.2    1.4  1  BET       Bromodomain extra-terminal - transcription regulati


Domain annotation for each model (and alignments):
>> YEATS  YEATS family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.9   0.1   3.4e-14   3.1e-10       2      80 ..      33     111 ..      32     112 .. 0.75

  Alignments for each domain:
  == domain 1  score: 39.9 bits;  conditional E-value: 3.4e-14
       YEATS   2 hkWtvavrsa.asddl..sefikk.VqFkLhetyanptrvvekpPFevtetGwGeFeiqikiffkpeaekpltlehdLklhpe 80 
                 ++W + +  + a++++  ++fi++ +  +   t+a ++r   kpP+ ++e+GwGeFe++i i+++++   + ++ h+L++++e
  EPX74606.1  33 REWAIKLVCLdAQQEEvdASFIDRmIIMNWLLTFALAVR---KPPYMIREQGWGEFEMEIIIYYADK-GGEYRFSHYLHFQQE 111
                 667777666644444346777776234556667776666...***********************88.556*********986 PP

>> BET  Bromodomain extra-terminal - transcription regulation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.9   0.2     5e-11   4.5e-07       8      63 ..     174     234 ..     172     235 .. 0.87

  Alignments for each domain:
  == domain 1  score: 29.9 bits;  conditional E-value: 5e-11
         BET   8 keLseeInkLpgeklgrvveIIqere.pelq....sdedEiElDidaldddtLreLekyvk 63 
                 ++L+++++kL +++l +vv+++ e++ p+       + +E  +D+ +l+d+ L+ L+++++
  EPX74606.1 174 EKLADGLQKLQEDDLLQVVQMVNENKtPDMYvrndIEGGEFHIDLYTLPDNLLLLLYSFCA 234
                 589************************554443346669********************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       640  (0.0356964); expected 358.6 (0.02)
Passed bias filter:                      524  (0.0292264); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 1730.22
//
Query:       EPX74607.1  [L=268]
Description: hydrolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.2e-22   78.7   0.1    1.7e-14   54.1   0.0    2.1  2  Abhydrolase_1    alpha/beta hydrolase fold
    7.7e-12   46.3   0.0    1.8e-11   45.0   0.0    1.6  1  Abhydrolase_6    Alpha/beta hydrolase family
    4.9e-10   39.1   0.1    8.2e-10   38.4   0.1    1.5  1  Hydrolase_4      Serine aminopeptidase, S33
    4.3e-08   33.1   0.1    0.00011   22.0   0.1    2.1  2  PGAP1            PGAP1-like protein
      5e-05   22.6   0.0    7.9e-05   21.9   0.0    1.3  1  DUF2048          Abhydrolase domain containing 18
    0.00014   21.6   0.0    0.00022   20.9   0.0    1.4  1  Esterase         Putative esterase
    0.00076   19.0   0.8     0.0062   16.1   0.4    2.3  2  DUF676           Putative serine esterase (DUF676)
     0.0013   17.8   0.0     0.0059   15.7   0.0    1.8  2  Chlorophyllase   Chlorophyllase
     0.0026   17.3   0.0     0.0058   16.2   0.0    1.5  1  Abhydro_lipase   Partial alpha/beta-hydrolase lipase region
  ------ inclusion threshold ------
      0.021   15.0   0.0      0.026   14.6   0.0    1.3  1  Thioesterase     Thioesterase domain
      0.031   12.8   0.7       0.28    9.6   0.3    2.3  2  PAF-AH_p_II      Platelet-activating factor acetylhydrolase, 
      0.035   13.4   0.0       0.36   10.1   0.1    2.2  2  DUF915           Alpha/beta hydrolase of unknown function (DU
       0.07   12.0   0.0       0.15   10.9   0.0    1.6  1  Chlorophyllase2  Chlorophyllase enzyme
      0.075   12.5   0.1       0.13   11.7   0.1    1.4  1  Acyl_transf_1    Acyl transferase domain


Domain annotation for each model (and alignments):
>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.1   0.0   1.3e-17   1.7e-14       1     106 [.      21     120 ..      21     142 .. 0.90
   2 !   23.0   0.0   4.1e-08   5.3e-05     200     256 ..     206     255 ..     170     256 .. 0.91

  Alignments for each domain:
  == domain 1  score: 54.1 bits;  conditional E-value: 1.3e-17
                    SEEEEE-STTTCGGGGTTGHHHHHHHHT.TSEEEEEEETTSTTSSSTTTGB.CHHSHHHHHHHHHHHHHHCTTSSEEEEEETHHHHHHHHHHHHHG CS
  Abhydrolase_1   1 pvlvilhGlpgssdvwaerglapaLakd.gfdvillDlrGvgySspapacinddygtasvaddldrildalgddkltlvGhSmGGmialayaaeyp 95 
                    p+++ilhGl+gs  +w    l +++  + + dv+ +D+r +g S+         y+   +a d + ++ ++g++k  ++GhSmGG +a+a a++yp
     EPX74607.1  21 PPVLILHGLLGSRKNWKS--LSNHFVSKlDRDVYNIDQRCHGDSPGVGPL---SYQS--LAFDTHHFMKSHGIEKASIIGHSMGGKTAMATALLYP 109
                    89****************..*****999****************888875...5776..9************************************ PP

                    GGEEEEEEESE CS
  Abhydrolase_1  96 erVkalvllga 106
                    + V +lv  + 
     EPX74607.1 110 DMVEKLVVADN 120
                    *****998776 PP

  == domain 2  score: 23.0 bits;  conditional E-value: 4.1e-08
                    HHHHHHCTHHHHSEEEEEEETTCSSSCHHHHHHHHHCHTSEEEEEEETCSSSHHHHS CS
  Abhydrolase_1 200 lllrlrelknvlaptlvisgtsDplvppkaledlaqllpkkrlvvisdagHlafleg 256
                      +++ +      ptlvi + +   vp++al  +++ +p+ +     d+gH++++e+
     EPX74607.1 206 CADQYTG------PTLVIKAKHSTFVPDEALPVFKKMFPN-YQMETLDCGHWVHFEK 255
                    5678888......***************************.**************98 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.0   0.0   1.4e-14   1.8e-11       1     217 [.      23     259 ..      23     262 .. 0.54

  Alignments for each domain:
  == domain 1  score: 45.0 bits;  conditional E-value: 1.4e-14
                    EEEE--GC.....G..CHHHHHHHHCCTCEEEEE--TTST.S-GGCS--HHHCHHH..HHHHCCTT..TTSEEEEEETCHHHHHHHHHHCC..... CS
  Abhydrolase_6   1 vlllHGagssassW..lvapLaallaagvhvlapDlpGhG.rsdpppldledladl..aalldelaagggpvvlvGHSlGGalalaaapla..... 86 
                    vl lHG+ +s+  W  l  +++ +l ++v  + +D + hG ++   pl+++  +++  +++  + +    ++ ++GHS+GG  a+a    a     
     EPX74607.1  23 VLILHGLLGSRKNWksLSNHFVSKLDRDV--YNIDQRCHGdSPGVGPLSYQS-LAFdtHHFMKSHG--IEKASIIGHSMGGKTAMA---TAllypd 110
                    7999**********65477999999****..********9444667799988.4444588888885..9999*********98888...5544565 PP

                    ..EEEEES-.............----TTTS----TTHHHHHHTT-C.........CCCHCCH...S-HSCCCCHHHCCCCHCHCCCGHHHHCCHHC CS
  Abhydrolase_6  87 lvvgvlldp.pp..........talpagllaaalelllallallrl.........lawlsre...plprlfladedadaawrarlarlaallaglg 159
                     v++++++   p          +   a+++ + ++l ++  a  +l          a+l  +    ++  f +     ++  ++    ++ lag+ 
     EPX74607.1 111 MVEKLVVADnSPiythlpektkVYIKALMRIDEANLKRQSSADNILkevedvtlvRAFLLSNirkNADNVFKS-----QIPLETIYNSLPDLAGFS 201
                    4444555554333422223433222222233333333333332222222211111122211111222224444.....333333333333444344 PP

                    HTTCCHHTT-TTGCEEE.C.....TT-CHHHHCHHCCCHSTTEEETCE...SSS-HHHHSHHHH CS
  Abhydrolase_6 160 llpaaawadlpvpllvl.g.....geDplvprllerllaqagarlpvvlpgaGHlphleepdev 217
                     +      +++ p+lv+ +       D+++p  + + +  + ++++    ++GH++h+e+++e+
     EPX74607.1 202 VN-ENCADQYTGPTLVIkAkhstfVPDEALP--VFKKMF-PNYQME--TLDCGHWVHFEKAQEF 259
                    33.3355555555566664222223355555..555555.666664..889*******999876 PP

>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.4   0.1   6.4e-13   8.2e-10       3     107 ..      19     118 ..      17     229 .. 0.85

  Alignments for each domain:
  == domain 1  score: 38.4 bits;  conditional E-value: 6.4e-13
  Hydrolase_4   3 pkavvvlvHGlaehsgryaelaeaLa.aqGfavyalDhrGhGrsegkrghvpsfddyvdDlaafvekvkeehpelplfllGhSmGGliallyllrypd 99 
                   k  v+++HGl  + +  + l ++++ + + +vy +D+r hG s+g      s++++  D + f+    + h+ ++  ++GhSmGG +a++ +l ypd
   EPX74607.1  19 KKPPVLILHGLLGSRKNWKSLSNHFVsKLDRDVYNIDQRCHGDSPGVG--PLSYQSLAFDTHHFM----KSHGIEKASIIGHSMGGKTAMATALLYPD 110
                  56679*************99998886267***************7543..479999*99*99996....7888999********************** PP

  Hydrolase_4 100 kvaglils 107
                   v++l+++
   EPX74607.1 111 MVEKLVVA 118
                  99999975 PP

>> PGAP1  PGAP1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.0   0.00061      0.78       6      27 ..      22      43 ..      18      81 .. 0.81
   2 !   22.0   0.1   8.5e-08   0.00011      88     167 ..      84     165 ..      69     203 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00061
       PGAP1  6 pVlFvpGnagsykqvrslAsea 27
                pVl ++G+ gs k+++sl++  
  EPX74607.1 22 PVLILHGLLGSRKNWKSLSNHF 43
                9*****************9876 PP

  == domain 2  score: 22.0 bits;  conditional E-value: 8.5e-08
       PGAP1  88 keptsviliGHSmGGivaraaltlknyikqsvntiltla.sPhalpplsfdkdilklyervnefwkkeleekek....lenvllv 167
                 + +++  +iGHSmGG+ a a+   + + +++v+++++ + sP+ +   +  k  +k   r++e   k++++ ++    +e+v+lv
  EPX74607.1  84 HGIEKASIIGHSMGGKTAMAT---ALLYPDMVEKLVVADnSPIYTHLPEKTKVYIKALMRIDEANLKRQSSADNilkeVEDVTLV 165
                 56677789********99443...344589*****999889*9888777777777777788877666666665575555555554 PP

>> DUF2048  Abhydrolase domain containing 18
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.0   6.1e-08   7.9e-05     168     345 ..      79     262 ..      73     268 .] 0.67

  Alignments for each domain:
  == domain 1  score: 21.9 bits;  conditional E-value: 6.1e-08
     DUF2048 168 hwlereGyGplgltGlSmGGhmaslaasnwpkplvlvpclswstasavfteGvlsksiawdvLekqledgnyrerlstasdaaaeekaakl...deake 263
                 h+++ +G  + ++ G SmGG  a  +a ++p     v  l  + +s+ +t    ++++  ++L +  ++ n + + s a+++ +e++  +l       +
  EPX74607.1  79 HFMKSHGIEKASIIGHSMGGKTAMATALLYPDM---VEKLVVADNSPIYTHLPEKTKVYIKALMRI-DEANLKRQ-SSADNILKEVEDVTLvraFLLSN 172
                 667788999************999999999875...556677888999999888888888888765.33333333.33333333333332200022223 PP

     DUF2048 264 rkae....kealrfmrllmdelthlknfsvpkd.....tsliivvaAkdDayvpresvaslqeiwpgsevryldgGHvsayllkkklfrka 345
                  + +      +    ++   +l +l+ fsv+ +     t    v+ Ak+  +vp e+   +++++p+ +++ ld GH    + k + f   
  EPX74607.1 173 IRKNadnvFKSQIPLETIYNSLPDLAGFSVNENcadqyTGPTLVIKAKHSTFVPDEALPVFKKMFPNYQMETLDCGHWV-HFEKAQEFTGH 262
                 333300123333344556788999******98822222345789*********************************65.45555556555 PP

>> Esterase  Putative esterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0   1.7e-07   0.00022     117     142 ..      89     114 ..      76     169 .. 0.78

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 1.7e-07
                 EEEEEETHHHHHHHHHHHCSTTTCCE CS
    Esterase 117 ravaGqSmGGlgALilalkhpdrFgs 142
                  +++G+SmGG +A+ +al +pd+   
  EPX74607.1  89 ASIIGHSMGGKTAMATALLYPDMVEK 114
                 79********************9875 PP

>> DUF676  Putative serine esterase (DUF676)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.4   4.9e-06    0.0062       8     100 ..      23     109 ..      19     127 .. 0.67
   2 ?   -2.1   0.0       1.8   2.3e+03      33      72 ..     139     178 ..     120     185 .. 0.70

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 4.9e-06
      DUF676   8 vVlvHGlqgnsaDlelikeqlekikeklpeekieflmsennesktfkgidvlgerlaeevlevvkkkkdknkkiSfvghSlGgliar.aaiakl 100
                 v + HGl g+ ++++++ ++++    kl++++  +   ++ + ++  g+  l ++ +     ++ k++   +k S++ghS+Gg +a   a+ ++
  EPX74607.1  23 VLILHGLLGSRKNWKSLSNHFVS---KLDRDVYNI--DQRCHGDS-PGVGPLSYQSLAFDTHHFMKSHGI-EKASIIGHSMGGKTAMaTALLYP 109
                 6678*******************...777775443..33443333.456555555444444444444444.6***********87641344444 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.8
      DUF676  33 eklpeekieflmsennesktfkgidvlgerlaeevlevvk 72 
                 ++++e ++   +s  n  k  +++++++  l++ +++ ++
  EPX74607.1 139 MRIDEANLKRQSSADNILKEVEDVTLVRAFLLSNIRKNAD 178
                 3466667777777788888888888888777777776655 PP

>> Chlorophyllase  Chlorophyllase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.48   6.1e+02      47      71 ..      21      45 ..      12      46 .. 0.84
   2 !   15.7   0.0   4.6e-06    0.0059     119     142 ..      86     109 ..      73     123 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.48
  Chlorophyllase 47 pvvlflhGtllsnkfyskllnhias 71
                    p vl+lhG l s k++ +l nh  s
      EPX74607.1 21 PPVLILHGLLGSRKNWKSLSNHFVS 45
                    67999*****999999999999766 PP

  == domain 2  score: 15.7 bits;  conditional E-value: 4.6e-06
  Chlorophyllase 119 lsklalvGhsrGGktafalalgys 142
                     ++k +++Ghs GGkta+a al y 
      EPX74607.1  86 IEKASIIGHSMGGKTAMATALLYP 109
                     7899*****************997 PP

>> Abhydro_lipase  Partial alpha/beta-hydrolase lipase region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   4.5e-06    0.0058      39      60 ..      15      36 ..       8      40 .. 0.87

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 4.5e-06
  Abhydro_lipase 39 sklekkpvVlLqHGLlasSevw 60
                       +kkp+Vl+ HGLl s ++w
      EPX74607.1 15 AVAPKKPPVLILHGLLGSRKNW 36
                    56789****************9 PP

>> Thioesterase  Thioesterase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   2.1e-05     0.026       2      87 ..      22     108 ..      21     191 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 2.1e-05
                   EEEEE--TTCCSGGGHHHHHHCTTC.EEEEEEECSTTST.SHHHCTTCHHHHHHHHHHHHHHH-SSSSEEEEEETHHHHHHHHHHHHH CS
  Thioesterase   2 pLflfppagGsasvfrslasklsdp.vvevlavqlpgre.rdepplesieelaaeyaealrqiqpegPyalfGhSlGgllAfevArqL 87 
                   p+ ++++  Gs +  +sl+ ++ ++   +v+++ ++ ++ ++   + s ++la      ++++  e    ++GhS+Gg  A+++A  +
    EPX74607.1  22 PVLILHGLLGSRKNWKSLSNHFVSKlDRDVYNIDQRCHGdSPGVGPLSYQSLAFDTHHFMKSHGIE-KASIIGHSMGGKTAMATALLY 108
                   788999999999999999999999988899999999887666666779999999999999999999.7899*************9876 PP

>> PAF-AH_p_II  Platelet-activating factor acetylhydrolase, isoform II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.13   1.6e+02      98     125 ..      19      45 ..       6      46 .. 0.74
   2 ?    9.6   0.3   0.00022      0.28     215     245 ..      74     104 ..      70     163 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.13
                  S-EEEEEEE--TT--TTTTHHHHHHHHH CS
  PAF-AH_p_II  98 ekyPlivFsHGLgafRtlYsalcielAs 125
                  +k P+++  HGL ++R  + +l+ ++ s
   EPX74607.1  19 KKPPVLIL-HGLLGSRKNWKSLSNHFVS 45 
                  56677765.*******999888776655 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00022
                  SS-GGGGTT-EEEEEEEEEEETHHHHHHHHH CS
  PAF-AH_p_II 215 dfdlqqlKdnldtskvaviGHsFGgAtviks 245
                  +fd +++  +   +k+++iGHs Gg t++++
   EPX74607.1  74 AFDTHHFMKSHGIEKASIIGHSMGGKTAMAT 104
                  68888988899999*************9865 PP

>> DUF915  Alpha/beta hydrolase of unknown function (DUF915)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.27   3.5e+02      10      39 ..      19      48 ..      12      59 .. 0.84
   2 ?   10.1   0.1   0.00028      0.36      96     118 ..      80     102 ..      74     111 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.27
      DUF915 10 keiPtifihGyggtaeslnemvkqlenkeg 39
                k+ P++ +hG  g+ +  +++ +++ +k +
  EPX74607.1 19 KKPPVLILHGLLGSRKNWKSLSNHFVSKLD 48
                567999*************99999987765 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00028
      DUF915  96 LkkkYnikkfnavGhSmGglalt 118
                   k  +i+k+ ++GhSmGg +++
  EPX74607.1  80 FMKSHGIEKASIIGHSMGGKTAM 102
                 567889*************8765 PP

>> Chlorophyllase2  Chlorophyllase enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00012      0.15      89     113 ..      86     110 ..      80     166 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00012
  Chlorophyllase2  89 lsklalsgHSrGgktafalalgkak 113
                      ++k ++ gHS Ggkta+a al + +
       EPX74607.1  86 IEKASIIGHSMGGKTAMATALLYPD 110
                      67999***************98776 PP

>> Acyl_transf_1  Acyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   0.00011      0.13      76      99 ..      80     103 ..      74     117 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00011
                    HHHHTT-TTSEEEE-TTHHHHHHH CS
  Acyl_transf_1  76 llkskGvrpaavvGHSlGElAaav 99 
                     +ks G + a ++GHS+G   a +
     EPX74607.1  80 FMKSHGIEKASIIGHSMGGKTAMA 103
                    58***************9776654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (268 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       616  (0.0343577); expected 358.6 (0.02)
Passed bias filter:                      559  (0.0311785); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.50u 0.30s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 1894.04
//
Query:       EPX74608.1  [L=253]
Description: 40S ribosomal protein S3a [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.5e-86  286.5   2.9    1.1e-85  286.3   2.9    1.0  1  Ribosomal_S3Ae  Ribosomal S3Ae family
  ------ inclusion threshold ------
      0.068   13.2   0.0       0.17   11.9   0.0    1.7  1  NEMO            NF-kappa-B essential modulator NEMO


Domain annotation for each model (and alignments):
>> Ribosomal_S3Ae  Ribosomal S3Ae family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  286.3   2.9   1.3e-89   1.1e-85       3     202 .]      17     221 ..      15     221 .. 0.99

  Alignments for each domain:
  == domain 1  score: 286.3 bits;  conditional E-value: 1.3e-89
                     ----S-TCCSEEEEEEEB-TTSSSSEEEEEEEE--BSSSESHHSHTT-EEEEESHHHHTCSHTSSSEEEEEEEEEEESSEEEEEEEEEEE-HHHH CS
  Ribosomal_S3Ae   3 kkkvvDkfkkKeWydvkaPslfgkreiGktlvnrtqgtkiaseklkgrvvevslaDLtndekeqafrklklkieevqgknaltnFkgmeltrDkl 97 
                     kk++vD+f++K+Wyd+kaPs+f+ +++Gktlvnrt+g k+a+++lkgr++evslaDL++de e+afrk+kl++e++qgkn+lt+F+g+++t+Dkl
      EPX74608.1  17 KKRAVDPFARKDWYDIKAPSFFEVKNVGKTLVNRTAGLKNANDALKGRILEVSLADLQKDE-EHAFRKVKLRVEDIQGKNCLTSFNGLSITSDKL 110
                     89**********************************************************8.889****************************** PP

                     HHH--SSB-EEEEEEEEEESSSEEEEEEEEEEE-ST.T.....B---HHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHTTTHHHHHHHHHHTTTS CS
  Ribosomal_S3Ae  98 rslvrkwsslIeaivdvktkDgyllrvfvvafTkkr.n.....sYakssqkkaIrkkmveilteeaseldlkelvkklipeslgkeiekeakkIy 186
                     rslvrkw+++Iea  ++kt+Dgyl rvfv++fT++r n     +Ya+ssq++aIr+km+++++++ s+++++elv+klipe +g+eiek+++ I+
      EPX74608.1 111 RSLVRKWQTTIEADQTIKTTDGYLCRVFVIGFTRRRaNqvkkaTYAQSSQIRAIRQKMFQVIQNQTSSCSMRELVQKLIPEVVGREIEKATNGIF 205
                     ************************************989******************************************************** PP

                     -EEEEEEEEEEEEE-S CS
  Ribosomal_S3Ae 187 plrnveirKvkvlkkP 202
                     pl+nv +rKvk+lk+P
      EPX74608.1 206 PLQNVLVRKVKILKAP 221
                     **************98 PP

>> NEMO  NF-kappa-B essential modulator NEMO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   1.9e-05      0.17      22      56 ..      54      88 ..      50     101 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 1.9e-05
        NEMO 22 lkqsNqalkeRlEeLsawqekqkeerefleeklre 56
                lk  N+alk+R+ e s    ++ ee  f + klr 
  EPX74608.1 54 LKNANDALKGRILEVSLADLQKDEEHAFRKVKLRV 88
                89***************************999984 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (253 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       991  (0.0552736); expected 358.6 (0.02)
Passed bias filter:                      597  (0.033298); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 1942.94
//
Query:       EPX74609.1  [L=737]
Description: fasciclin domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      2e-26   92.7   0.3    1.5e-06   28.4   0.0    5.3  5  Fasciclin  Fasciclin domain


Domain annotation for each model (and alignments):
>> Fasciclin  Fasciclin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.4   0.0   8.6e-11   1.5e-06       3     126 ..      63     172 ..      61     175 .. 0.81
   2 !   23.2   0.0   3.4e-09   6.1e-05      24     128 .]     203     308 ..     186     308 .. 0.83
   3 !    8.6   0.0   0.00011         2      19      94 ..     340     412 ..     324     432 .. 0.72
   4 !   24.6   0.0   1.3e-09   2.4e-05      23     128 .]     462     569 ..     437     569 .. 0.86
   5 ?    0.2   0.0     0.045   8.1e+02       4      30 ..     584     607 ..     581     610 .. 0.79

  Alignments for each domain:
  == domain 1  score: 28.4 bits;  conditional E-value: 8.6e-11
                 GHHHHHHHHTTTCCCCCTCSSSSEEEEEE-HHHHCCCHHHHHHHHHTCHHHHHHHHHTTEEES.SS-HHHHHHHHEEEECCTTSSEEEEEEE...GGTT CS
   Fasciclin   3 lstfvsllekaglaeeLnkkdgglTvFaPtneAfaklppellakllndkkklkeiLkyHvvpe.tvsssalkkasetlatllegaklrvnie...kgng 97 
                 +  +++ l++ ++   L ++++glT+FaP neAf             d++ +  +  yH+++   +    + +   +++   +g+++ ++++   ++n+
  EPX74609.1  63 FFLLIRHLQRDRFIPYL-NRNKGLTFFAPLNEAF-------------DDDTVDPVWPYHILNTtDFNRTVFAT---EFKA-ADGQPIALKVThkgESNN 143
                 5567778888999999*.7779************.............9999***********95556665555...5998.899988888886563333 PP

                 .EEEETTEEEEEEEEEEESSEEEEEESS-T CS
   Fasciclin  98 .tvtvngkarvvrsdieatngvihvidkvL 126
                     vn+ + +vr++ +a+ g++ v+d++L
  EPX74609.1 144 pFDLVND-VYIVRPNWQADSGIVQVVDQLL 172
                 3567888.********************99 PP

  == domain 2  score: 23.2 bits;  conditional E-value: 3.4e-09
                 SSEEEEEE-HHHHCCC.HHHHHHHHHT..CHHHHHHHHHTTEEES.SS-HHHHHHHHEEEECCTTSSEEEEEEEGGTTEEEETTEEEEEEEEEEESSEE CS
   Fasciclin  24 gglTvFaPtneAfakl.ppellaklln..dkkklkeiLkyHvvpe.tvsssalkkasetlatllegaklrvniekgngtvtvngkarvvrsdieatngv 118
                 ++ T+F+Pt + f +   + +l+ +++    +++k++ + H v   +v+++++++  ++++   +g  ++++++k n+ +++n+ +   + d  + ng+
  EPX74609.1 203 ESTTLFVPTTDVFINTfTNTELSYMYSiyATEDVKTLFNQHSVIHeRVYADDVVEP-KNFTL-RNGFVMTMRYDKPNKILYFND-TPSYNFDLVTRNGA 298
                 468**********666255555555559*************77666********97.77775.8888888888899********.99999********* PP

                 EEEESS-TSX CS
   Fasciclin 119 ihvidkvLlp 128
                 ihv+ ++L p
  EPX74609.1 299 IHVLPDLLNP 308
                 ***9888865 PP

  == domain 3  score: 8.6 bits;  conditional E-value: 0.00011
                 CTCSSSSEEEEEE-HHHHCCCHHHHHHHHHTCHHHHHHHHHTTEEESSS-HHHHHHHHEEEECCTTSSEEEEEEE.G CS
   Fasciclin  19 LnkkdgglTvFaPtneAfaklppellakllndkkklkeiLkyHvvpetvsssalkkasetlatllegaklrvnie.k 94 
                 + ++ ++  +FaPtn Af++  ++    ++  + ++ +i ky++++   +s + ++a  ++at      l+vn++ +
  EPX74609.1 340 I-DTSSHRGIFAPTNWAFRES-SDIDYHIM-ENFYMPNINKYYLAKTNSKSHDEHNALIRVAT-DTTGALYVNFDsH 412
                 4.55567779********555.45555554.78899999999999998888887777789999.7777888888743 PP

  == domain 4  score: 24.6 bits;  conditional E-value: 1.3e-09
                 SSSEEEEEE-HHHHCCCHHHHHHHHHTCHHHHHHHHHTTEEESSS-HHHHHHH..HEEEECCTTSSEEEEEEE.GGTTEEEETT.EEEEEEEEEEESSE CS
   Fasciclin  23 dgglTvFaPtneAfaklppellakllndkkklkeiLkyHvvpetvsssalkka..setlatllegaklrvnie.kgngtvtvng.karvvrsdieatng 117
                 d + T F  +n+A+ kl    ++ l+++ + ++++ + +v +++++  + +++  s++++t  +g+++ +++  ++n+ +++ng   +v ++d+  + g
  EPX74609.1 462 DPNSTWFLIENDAWMKL-GLIRKALEHNMEMMQNLFLEYVFQGKHYFGSSEDSwtSGNYTT-ISGKSVMIENCpENNDIIYINGlPYEVQTRDMLVQEG 558
                 4478999999****999.3455556669*****************9999999888899999.*********9999999*******99************ PP

                 EEEEESS-TSX CS
   Fasciclin 118 vihvidkvLlp 128
                 v+h+++++ +p
  EPX74609.1 559 VVHILNRLVVP 569
                 ******99877 PP

  == domain 5  score: 0.2 bits;  conditional E-value: 0.045
                 HHHHHHHHTTTCCCCCTCSSSSEEEEE CS
   Fasciclin   4 stfvsllekaglaeeLnkkdgglTvFa 30 
                 ++f +l+ k+gl+++L ++  gl + +
  EPX74609.1 584 KEFLELIDKQGLTDTL-DQ--GLSIVV 607
                 789*************.54..555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (737 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       370  (0.020637); expected 358.6 (0.02)
Passed bias filter:                      312  (0.017402); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.26s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 5290.69
//
Query:       EPX74610.1  [L=124]
Description: DNA-directed RNA polymerase I and III subunit Rpc19 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.1e-34  116.6   0.0    4.2e-34  116.2   0.0    1.2  1  RNA_pol_L_2  RNA polymerase Rpb3/Rpb11 dimerisation domain
    8.3e-14   50.8   0.0    1.2e-13   50.2   0.0    1.3  1  RNA_pol_L    RNA polymerase Rpb3/Rpb11 dimerisation domain
  ------ inclusion threshold ------
      0.057   13.8   0.0        0.1   13.0   0.0    1.4  1  FlaC_arch    Flagella accessory protein C (FlaC)


Domain annotation for each model (and alignments):
>> RNA_pol_L_2  RNA polymerase Rpb3/Rpb11 dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.2   0.0     7e-38   4.2e-34       2      73 ..      35     106 ..      34     108 .. 0.97

  Alignments for each domain:
  == domain 1  score: 116.2 bits;  conditional E-value: 7e-38
                  EEEEEES--HHHHHHHHHHHTTSTTEEEEEEECSSTTTSEEEEEEEESTSS-HHHHHHHHHHHHHHHHHHHH CS
  RNA_pol_L_2   2 ltfeingEDhTLgnlLrhlllknpsVefagYkipHPlepkmnlriqtkssnnpleaLkkalkdlldicdele 73 
                  +tf++ +EDhTLgn Lr++++knp+Vef+gY+ipHP+e kmnlriqt  s++++eaLkk+l+dl+d+cd + 
   EPX74610.1  35 VTFQVLKEDHTLGNSLRYMIMKNPEVEFCGYSIPHPSEAKMNLRIQTLPSTTAVEALKKGLDDLMDLCDVVT 106
                  89*******************************************************************986 PP

>> RNA_pol_L  RNA polymerase Rpb3/Rpb11 dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.2   0.0   2.1e-17   1.2e-13       1      69 []      36     102 ..      36     102 .. 0.95

  Alignments for each domain:
  == domain 1  score: 50.2 bits;  conditional E-value: 2.1e-17
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   RNA_pol_L   1 efllrgvdhtlgNaLRrillsevpgvaiea...pvvkvntdkdklilevetdgslkPeealkeAlkiLkekl 69 
                 +f++ ++dhtlgN+LR++++ ++p v++++   p       + k++l+++t  s+++ ealk++l++L++ +
  EPX74610.1  36 TFQVLKEDHTLGNSLRYMIM-KNPEVEFCGysiPH----PSEAKMNLRIQTLPSTTAVEALKKGLDDLMDLC 102
                 599999**************.*********99966....7799**************************987 PP

>> FlaC_arch  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   1.7e-05       0.1      28      53 ..      86     111 ..      74     111 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.7e-05
   FlaC_arch  28 ksveelkenVkdllsLYEvVsnqvNP 53 
                 + ve lk+   dl++L +vV++ +N+
  EPX74610.1  86 TAVEALKKGLDDLMDLCDVVTDSFNK 111
                 679**********************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       480  (0.0267723); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.22s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 966.07
//
Query:       EPX74611.1  [L=257]
Description: CAA Xprenyl protease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.7e-15   55.2  11.3    6.7e-15   55.2  11.3    2.2  2  CPBP      CPBP intramembrane metalloprotease


Domain annotation for each model (and alignments):
>> CPBP  CPBP intramembrane metalloprotease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.2  11.3   3.8e-19   6.7e-15       9      92 .]     116     219 ..      38     219 .. 0.89
   2 ?   -2.9   0.3      0.51   9.1e+03      46      52 ..     241     247 ..     227     256 .. 0.46

  Alignments for each domain:
  == domain 1  score: 55.2 bits;  conditional E-value: 3.8e-19
                 HHHHHHHHHHHHHHHTTCHHHHHHHH..S-HHHHHHHHHHHHHCSGGG...................HHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHH CS
        CPBP   9 llalllapllEEllfRglllqllqer.gsstlailissilFglaHlpn...................gpsvllaalaGlvlgylylktgsllaaillHa 87 
                 +++l+++pl EE++fR  +++l+++  +s+  +il + +lFg+aH+++                    +++++++l+G++ +y++l+t s+++ +l+H+
  EPX74611.1 116 WRNLVIGPLSEEVMFRCSIIPLFEKAnYSQKETILSAPLLFGFAHFHHsyefllsypgayvvamiqfLVQFFYTTLFGWYSTYVFLNTHSIWPTFLIHS 214
                 569***********************766689999999**********88888888877777777766667**************************** PP

                 HHHHH CS
        CPBP  88 llnll 92 
                 ++n++
  EPX74611.1 215 FCNFM 219
                 ***96 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.51
                 HHHHHCS CS
        CPBP  46 ilFglaH 52 
                 ++ gl+ 
  EPX74611.1 241 LITGLFL 247
                 2222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       759  (0.0423336); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.28s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 1765.22
//
Query:       EPX74612.1  [L=341]
Description: DNA replication factor C complex subunit Rfc4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.4e-23   81.2   0.1    1.9e-22   79.5   0.0    1.9  2  Rep_fac_C        Replication factor C C-terminal domain
    1.8e-13   50.6   0.0    7.5e-11   42.1   0.1    2.2  2  DNA_pol3_delta2  DNA polymerase III, delta subunit
      8e-12   45.7   0.0    1.6e-11   44.8   0.0    1.5  1  AAA              ATPase family associated with various cellul
    8.1e-06   25.9   0.0    1.7e-05   24.9   0.0    1.5  1  AAA_14           AAA domain
    1.6e-05   25.4   0.0     0.0012   19.2   0.0    2.3  2  AAA_16           AAA ATPase domain
    3.5e-05   23.6   0.0    5.8e-05   22.9   0.0    1.3  1  Viral_helicase1  Viral (Superfamily 1) RNA helicase
     0.0001   22.1   0.0    0.00029   20.6   0.0    1.7  2  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    0.00015   21.6   0.0    0.00035   20.4   0.0    1.6  1  AAA_3            ATPase family associated with various cellul
    0.00023   21.4   0.2       0.14   12.4   0.2    2.6  1  AAA_22           AAA domain
    0.00075   18.9   0.0      0.013   14.9   0.0    2.3  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
     0.0015   18.3   0.1     0.0026   17.6   0.1    1.2  1  DNA_pol3_delta   DNA polymerase III, delta subunit
     0.0026   16.8   0.1     0.0081   15.2   0.0    1.9  2  MeaB             Methylmalonyl Co-A mutase-associated GTPase 
     0.0027   17.5   0.0     0.0039   17.0   0.0    1.2  1  AAA_11           AAA domain
     0.0039   17.1   0.2      0.028   14.3   0.1    2.2  2  NTPase_1         NTPase
      0.005   17.2   0.0      0.013   15.8   0.0    1.8  1  AAA_assoc_2      AAA C-terminal domain
     0.0053   16.7   0.0      0.011   15.6   0.0    1.6  1  Rad17            Rad17 P-loop domain
     0.0078   15.6   0.0        4.4    6.7   0.0    2.4  2  TniB             Bacterial TniB protein
  ------ inclusion threshold ------
      0.016   15.5   0.6       0.28   11.5   0.1    2.6  3  AAA_19           AAA domain
      0.043   13.5   0.0      0.092   12.5   0.0    1.5  1  AAA_24           AAA domain
      0.046   13.1   0.2       0.22   10.8   0.0    2.2  3  FtsK_SpoIIIE     FtsK/SpoIIIE family
      0.051   13.7   0.0       0.21   11.7   0.0    2.0  2  PTPlike_phytase  Inositol hexakisphosphate
      0.053   12.8   0.0      0.088   12.1   0.0    1.3  1  MipZ             ATPase MipZ
      0.061   13.3   0.5        1.6    8.7   0.3    3.1  3  AAA_5            AAA domain (dynein-related subfamily)
       0.15   11.7   0.1       0.52   10.0   0.1    1.9  1  AAA_30           AAA domain


Domain annotation for each model (and alignments):
>> Rep_fac_C  Replication factor C C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       5.2   3.9e+03      37      51 ..     180     195 ..     157     218 .. 0.63
   2 !   79.5   0.0   2.5e-25   1.9e-22       1      88 []     242     328 ..     242     328 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 5.2
                 HHHHHHHHHHGCCS.. CS
   Rep_fac_C  37 ediltqlhrvvkeq.e 51 
                 +++l+ l +++k +  
  EPX74612.1 180 QQVLQRLLEICKLEnV 195
                 4555555555554332 PP

  == domain 2  score: 79.5 bits;  conditional E-value: 2.5e-25
                 --HHHHHHHHHHHHHT-HHHHHHHHHHHHHHC---HHHHHHHHHHHGCCS..S-HHHHHHHHHHHHHHHHHHHCTH-HHHHHHHHHHH CS
   Rep_fac_C   1 phpteieeileaclngdfeeaykklrellvekGysaediltqlhrvvkeqeelpeaqkleilellgeiekrlveGasehlqlsallar 88 
                 p p  i  il++c +gd+++a +kl+ +++  Gysa di+t+++rvvk+++e+pe ++le+l+++g++++ ++ G++++lqlsal++r
  EPX74612.1 242 PSPVAIYAILQSCHSGDIDTALAKLK-DVWGLGYSAVDIVTNMFRVVKTMNEIPEFTRLEMLKEIGTTHMIVLGGVQTLLQLSALVCR 328
                 67888999*****88**********6.***********************99*********************************986 PP

>> DNA_pol3_delta2  DNA polymerase III, delta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4   0.0    0.0092       6.9       2      44 ..      37      78 ..      36      88 .. 0.89
   2 !   42.1   0.1     1e-13   7.5e-11      84     162 ..      96     177 ..      86     178 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0092
  DNA_pol3_delta2  2 qeealkilskalksgrlahayLfeGdegigkkelalnlakall 44
                     +ee+++ l+ ++k g++ h ++++G  gigk ++ ++la+ ll
       EPX74612.1 37 NEETVDRLKVIAKDGNMPH-LIISGMPGIGKTTSIMCLANMLL 78
                     6889999**********99.689****************9987 PP

  == domain 2  score: 42.1 bits;  conditional E-value: 1e-13
  DNA_pol3_delta2  84 kldqirelieelsrkpre...skkkiiiiedaekmtksAaNalLktlEEPsenaifiLitsdtnklLktirSRcqelkfspl 162
                       +d +r+ i+ + +k ++   +++kiii+++a+ mt+ A+ al +t+E  s+ + f L  +++nk++++i+SRc +l+ s+l
       EPX74612.1  96 GIDVVRNKIKGFAQKKVNlppGRHKIIILDEADSMTAGAQQALRRTMEIYSNTTRFALACNQSNKIIEPIQSRCAILRYSRL 177
                      6899998888888888776889******************************************************998876 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.8   0.0   2.1e-14   1.6e-11       2     128 ..      57     173 ..      56     177 .. 0.88

  Alignments for each domain:
  == domain 1  score: 44.8 bits;  conditional E-value: 2.1e-14
                 EEESSTTSSHHHHHHHHHHHH.....THEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTS...TSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHH CS
         AAA   2 llyGppGtGKTllakavakel.....gvefleisgsellskyvgesekkirelfkeakeka...kpsilfiDEidalaksrsgseseeeervvnqLlte 92 
                 +++G pG+GKT+ +  +a+ l        +le+++s+ +   +    +ki+++ ++ k +    +++i+++DE+d+++              +++L + 
  EPX74612.1  57 IISGMPGIGKTTSIMCLANMLlgsgcREGVLELNASDER--GIDVVRNKIKGFAQK-KVNLppgRHKIIILDEADSMTAGA-----------QQALRRT 141
                 789*****************7655334669*********..99*********9998.555579888***********8888...........******* PP

                 HHHTTTSSSTEEEEEEESSGGGSTHHHHSTTSSEEE CS
         AAA  93 ldgvkkkeskvivigatnrpdkldpallrgRfdrki 128
                 ++ +++   ++ + +a+n+ +k+ +++  +R+ +  
  EPX74612.1 142 MEIYSN---TTRFALACNQSNKIIEPIQ-SRCAILR 173
                 ****99...589****************.9*98765 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.0   2.2e-08   1.7e-05       4      97 ..      55     152 ..      52     177 .. 0.76

  Alignments for each domain:
  == domain 1  score: 24.9 bits;  conditional E-value: 2.2e-08
      AAA_14   4 ilvitGaRrvGKTtllkqlikell..vkkesilyinldderdkkladpekllelilek..lkeekktylflDEiqev.pewekalkslvdegknldviv 97 
                  l+i+G+  +GKTt +  l++ ll    +e +l++n  der  +   + k+  + ++k  l + ++++++lDE+  +  ++++al++ ++ ++n   ++
  EPX74612.1  55 HLIISGMPGIGKTTSIMCLANMLLgsGCREGVLELNASDERGIDVVRN-KIKGFAQKKvnLPPGRHKIIILDEADSMtAGAQQALRRTMEIYSNTTRFA 152
                 689*****************9999*9999**********999875544.35555555543333899********87626899****9999664433332 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   1.6e-06    0.0012       3      51 ..      35      80 ..      33     100 .. 0.79
   2 ?    4.0   0.0     0.078        58     130     161 ..     114     144 ..      85     153 .. 0.73

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 1.6e-06
      AAA_16  3 vGReeeleqLlsalervrsgrpelvllsGesGvGKsslvrellralekd 51
                vG ee +++L+ + +   +g  + +++sG++G+GK++ + +l++ l ++
  EPX74612.1 35 VGNEETVDRLKVIAK---DGNMPHLIISGMPGIGKTTSIMCLANMLLGS 80
                677777777777666...555689******************9877776 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.078
      AAA_16 130 lsrderplvlvlDdlqwadeaslqllaaLlrl 161
                 l+++++  +++lD+++   ++ +q+l+ +++ 
  EPX74612.1 114 LPPGRH-KIIILDEADSMTAGAQQALRRTMEI 144
                 334333.79*****************998875 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.0   7.8e-08   5.8e-05       2      81 ..      57     137 ..      56     144 .. 0.79

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 7.8e-08
  Viral_helicase1   2 vvhGvpGcGKStlirkllrts..liltvnrptaelltegkpklpnlsvrtvdsflmalvkstkgkililDEylllhaGyill 81 
                      +++G+pG GK+t+i  l+++     +++++   ++  e+  ++ +++++++ +   +l ++ + ki+ilDE+ +++aG  ++
       EPX74612.1  57 IISGMPGIGKTTSIMCLANMLlgSGCREGVLELNASDERGIDVVRNKIKGFAQKKVNLPPG-RHKIIILDEADSMTAGAQQA 137
                      89******************55544445555555555555999999999999999988876.8*********9998886655 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   3.9e-07   0.00029       2      57 ..      27      77 ..      26      87 .. 0.89
   2 ?   -3.0   0.0       7.4   5.5e+03      85     111 ..     119     145 ..     111     148 .. 0.81

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 3.9e-07
      RuvB_N  2 rPksleeyigqekvkeklkifieaakkreealdhvllyGpPGlGkttlakiiakel 57
                rP  l++ +g e+  ++lk++ +     + ++ h++++G PG+Gktt  + +a+ l
  EPX74612.1 27 RPVVLDDVVGNEETVDRLKVIAK-----DGNMPHLIISGMPGIGKTTSIMCLANML 77
                9******************9854.....56789**************999999865 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 7.4
      RuvB_N  85 kdvlfideihrlsraveevlysamedf 111
                 ++++ +de   ++  +++ l  +me +
  EPX74612.1 119 HKIIILDEADSMTAGAQQALRRTMEIY 145
                 578889999999998888888888865 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0   4.7e-07   0.00035       1      88 [.      55     144 ..      55     159 .. 0.84

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 4.7e-07
       AAA_3   1 hvllegvPGlaktllvkalakaldlefkriqftpdllPsdilGtevfeekekefefkk...Gpvfanllladeinrappktqsalleamee 88 
                 h+++ g+PG++kt+ +  la++l  +  r     +l  sd  G++v+++k k f  kk    p  +++++ de +  ++ +q al  +me 
  EPX74612.1  55 HLIISGMPGIGKTTSIMCLANMLLGSGCREG-VLELNASDERGIDVVRNKIKGFAQKKvnlPPGRHKIIILDEADSMTAGAQQALRRTMEI 144
                 99********************998888865.4689999999999999998777655511156689*******************999985 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.2   0.00019      0.14       7      65 ..      55     109 ..      49     190 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00019
      AAA_22   7 ilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralg 65 
                 +l++ G +G+GKTt++  l++ l         r +v++ +++ + + + +++++  + +
  EPX74612.1  55 HLIISGMPGIGKTTSIMCLANMLLG----SGCREGVLELNASDERGIDVVRNKIKGFAQ 109
                 7899999999999999999998842....224455555555555555555555544444 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   1.8e-05     0.013       2      47 ..      31      78 ..      30     104 .. 0.77
   2 ?    1.5   0.0      0.22   1.6e+02     107     132 ..     119     144 ..     106     153 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.8e-05
  Mg_chelatase  2 lkdvkGqeeakraleiaa.aGg.HnlllvGppGsGKtmlakrlpsllp 47
                  l dv+G+ee+   l++ a  G+  +l++ G pG GKt  + +l+++l 
    EPX74612.1 31 LDDVVGNEETVDRLKVIAkDGNmPHLIISGMPGIGKTTSIMCLANMLL 78
                  689****999888886551565359**************999987764 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.22
  Mg_chelatase 107 nGvLfLDElpefkrkvlevLRePled 132
                   + +++LDE+  +++ + ++LR+ +e 
    EPX74612.1 119 HKIIILDEADSMTAGAQQALRRTMEI 144
                   56899*****************9995 PP

>> DNA_pol3_delta  DNA polymerase III, delta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.1   3.5e-06    0.0026      58     170 ..     119     221 ..     117     222 .. 0.94

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 3.5e-06
                     EEEEEEE--.....TT-S-TTHHHHHHHHTTT--SSEEEEEEES.S--HHHHHHHHHTTTEEEEEE----TTTHHHHHHHHHHHTT-EE-HHHHH CS
  DNA_pol3_delta  58 krivvlknpklltkesklnekllkeLeeylsnlpedtlLiliapkklderkklvklLkkkatvveaktlkeeelkkwiqkraqelglkiekeale 152
                      +i++l+ +      ++ ++  +++L ++++ ++ +t + l ++    + +k++  ++++  ++++++l+e+++ + + ++++ ++++ +++ + 
      EPX74612.1 119 HKIIILDEA------DSMTAGAQQALRRTMEIYSNTTRFALACN----QSNKIIEPIQSRCAILRYSRLTEQQVLQRLLEICKLENVNYTDDGMA 203
                     578888888......569999***********************....6789******************************************* PP

                     HHHHHHTT-HHHHHHHHH CS
  DNA_pol3_delta 153 lLlelvennlsaikqele 170
                      L+   e++++++ ++l+
      EPX74612.1 204 ALIMTAEGDMRQAVNNLQ 221
                     ***************997 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   1.1e-05    0.0081      21      69 ..      45      93 ..      22     110 .. 0.88
   2 ?   -2.4   0.0       2.5   1.9e+03     163     184 ..     184     205 ..     175     228 .. 0.59

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.1e-05
                HHGGG-S-SEEEEEEE-TTSSHHHHHHHHHHHHHCTT--EEEEEE---- CS
        MeaB 21 rllakaGraqvvGltGvPGaGkstlvealglelrrrGkrvavlavDPss 69
                +++ak G+   + + G+PG Gk t +  l+  l   G r +vl ++ s 
  EPX74612.1 45 KVIAKDGNMPHLIISGMPGIGKTTSIMCLANMLLGSGCREGVLELNASD 93
                56788999999*******************************9887664 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 2.5
                 CCCHHH-SEEEEE---HHHHHH CS
        MeaB 163 kGileiaDiivvnkaDkkeaek 184
                 + +lei  +  vn +D   a+ 
  EPX74612.1 184 QRLLEICKLENVNYTDDGMAAL 205
                 4577777777777777444432 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   5.2e-06    0.0039      18      77 ..      55     176 ..      40     225 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 5.2e-06
      AAA_11  18 eitliqGPPGtgKTktivellsqll..................................................sr.........rkseeeksakpri 57 
                 +  +i+G PG gKT+ i+ l ++ll                                                  s+         r+ e   ++++  
  EPX74612.1  55 H-LIISGMPGIGKTTSIMCLANMLLgsgcregvlelnasdergidvvrnkikgfaqkkvnlppgrhkiiildeadSMtagaqqalrRTMEIYSNTTRFA 152
                 4.68********************************999999999999999999888888877777777766666115555556644478888999999 PP

      AAA_11  58 LvCapSNaAvDeller..llr..g 77 
                 L+C +SN+ +  + +r  +lr  +
  EPX74612.1 153 LACNQSNKIIEPIQSRcaILRysR 176
                 ********9999999844333444 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.1   3.7e-05     0.028       1      29 [.      55      83 ..      55      96 .. 0.92
   2 ?    0.5   0.0      0.67     5e+02      95     149 ..     118     170 ..      86     190 .. 0.60

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 3.7e-05
                EEEEE--TTSSHHHHHHHHHHHH...GGG CS
    NTPase_1  1 kvfiTGppGvGKtTlvkkvlellkssgvk 29
                +++i+G+pG+GKtT +  ++++l  sg++
  EPX74612.1 55 HLIISGMPGIGKTTSIMCLANMLLGSGCR 83
                789*******************9998886 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.67
                 HH-EEEE---STTGGG-HHHHHHHHHHHTTTSEEEEE--SS--SHHHHHHHT-TT CS
    NTPase_1  95 eadviviDEiGkmElkskkfkeaveevLksekpvlavihrrkdlalveeirerkd 149
                 +  +i++DE  +m   +++  +   e+ ++ + +     +  +++++e i++r  
  EPX74612.1 118 RHKIIILDEADSMTAGAQQALRRTMEIYSNTTRFALACNQ--SNKIIEPIQSRCA 170
                 4559999999999776665555555555544443333333..3577888777744 PP

>> AAA_assoc_2  AAA C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   1.7e-05     0.013       4      35 ..     194     225 ..     191     269 .. 0.88

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1.7e-05
                  .XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  AAA_assoc_2   4 klkleddalealaeladGDaRkaLnlLElaae 35 
                  +++++dd ++al+ +a+GD+R+a n L+  ++
   EPX74612.1 194 NVNYTDDGMAALIMTAEGDMRQAVNNLQSTVS 225
                  78999**********************98776 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   1.5e-05     0.011       8      69 ..      21      77 ..      15     114 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 1.5e-05
       Rad17  8 lWfekykPekaeelavhkkkieevkewlkadvLesrkkriLLisGPsGCgkstvvkvLskel 69
                +W+eky+P  ++++    + ++ +k   k   +++     L+isG +G gk+t +  L+  l
  EPX74612.1 21 PWVEKYRPVVLDDVVGNEETVDRLKVIAKDGNMPH-----LIISGMPGIGKTTSIMCLANML 77
                7*************999999999988777766665.....69****************9875 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.0    0.0059       4.4      25      52 ..      43      70 ..      34      76 .. 0.83
   2 !    6.4   0.0    0.0072       5.4     120     144 ..     119     143 ..     103     155 .. 0.89

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0059
        TniB 25 eLleypkrkrmpnlllvGdsnnGKtmiv 52
                +L   +k   mp+l++ G + +GKt+ +
  EPX74612.1 43 RLKVIAKDGNMPHLIISGMPGIGKTTSI 70
                5666788999***************865 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0072
        TniB 120 vrvLiiDEihnllagsarkqrefln 144
                  +++i+DE +++ ag +++ r++++
  EPX74612.1 119 HKIIILDEADSMTAGAQQALRRTME 143
                 69**************999998875 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   0.00037      0.28       9      37 ..      52      80 ..      44     110 .. 0.82
   2 ?   -0.1   0.0       1.4     1e+03     102     125 ..     118     141 ..      98     153 .. 0.71
   3 ?   -0.6   0.0         2   1.5e+03      43      77 ..     275     313 ..     258     336 .. 0.65

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00037
      AAA_19  9 kekvllvtaGpGtGKTrvlkhivallvel 37
                + ++l++ + pG GKT+ +++  ++l+  
  EPX74612.1 52 NMPHLIISGMPGIGKTTSIMCLANMLLGS 80
                56789999************999888655 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 1.4
      AAA_19 102 eeellivDEfqdvdelqyrLlkal 125
                 +++++i DE+  ++  +++ l++ 
  EPX74612.1 118 RHKIIILDEADSMTAGAQQALRRT 141
                 4569999**998886555555544 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 2
      AAA_19  43 eeillvaftgrAakelre.....rlaalgaeatTiHrlal 77 
                   + +v+   r +k ++e     rl ++++e+ T H + l
  EPX74612.1 275 SAVDIVTNMFRVVKTMNEipeftRL-EMLKEIGTTHMIVL 313
                 5566677777777777776666555.77888999997744 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   0.00012     0.092       5      91 ..      56     144 ..      53     154 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00012
      AAA_24   5 iliyGpsgiGKTtlakelgpkplfidtekGlksldadkfpdie....swedfldevvelaaeladyktlviDtideleelclaevirqnek 91 
                 ++i G +giGKTt++  l +  l   + +G+ +l+a +   i     +++ f ++ v l+      k++++D +d +   + + ++r  e+
  EPX74612.1  56 LIISGMPGIGKTTSIMCLANMLLGSGCREGVLELNASDERGIDvvrnKIKGFAQKKVNLPPGR--HKIIILDEADSMTAGAQQALRRTMEI 144
                 6799**************777777899999999999886644433344444444444444444..49999999999999998888777666 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0    0.0003      0.22      31      59 ..      46      73 ..      22      79 .. 0.73
   2 ?   -1.6   0.0       1.9   1.4e+03     199     218 ..     200     219 ..     180     224 .. 0.78
   3 ?   -2.5   0.0       3.5   2.6e+03      34      47 ..     303     315 ..     263     318 .. 0.56

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.0003
                  EEEEGGGS-.SEEEE--TTSSHHHHHHHH CS
  FtsK_SpoIIIE 31 lvldlkkmashllvaGatgsGKStalntL 59
                  +++   +m+ hl++ G +g GK+t ++ L
    EPX74612.1 46 VIAKDGNMP-HLIISGMPGIGKTTSIMCL 73
                  333334455.**************99876 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.9
                   C-HHHHHHHHHHH....HHH CS
  FtsK_SpoIIIE 199 derieLrlaapkdssvlved 218
                   d +++L+++a++d +++v +
    EPX74612.1 200 DGMAALIMTAEGDMRQAVNN 219
                   45788889999887776665 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 3.5
                   EGGGS-.SEEEE-- CS
  FtsK_SpoIIIE  34 dlkkmashllvaGa 47 
                    +++   h++v+G+
    EPX74612.1 303 KEIGT-THMIVLGG 315
                   22223.36666665 PP

>> PTPlike_phytase  Inositol hexakisphosphate
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00028      0.21     103     155 ..      26      77 ..       5      78 .. 0.83
   2 ?   -1.9   0.0       4.2   3.1e+03      78     105 ..     143     177 ..     123     189 .. 0.58

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00028
                      EEEEE-TTS---HHHHHHHHHHHHTS-TT-EEEEE-SSSSHHHHHHHHHHHHH CS
  PTPlike_phytase 103 aRipitdekapeeedfdalvsilkeapektalvfnCqmGrgRTTtamviatLl 155
                      +R  + d+   +ee++d+l  i k+  + + l+++   G g+TT  m++a +l
       EPX74612.1  26 YRPVVLDDVVGNEETVDRLKVIAKDG-NMPHLIISGMPGIGKTTSIMCLANML 77 
                      666677788889999**998666666.68**********************98 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 4.2
                      .................EE-HHHHHHHTT-EEEEE CS
  PTPlike_phytase  78 evweeve.......tpeevyerelaeelslrYaRi 105
                      e+ ++ +       ++++++e  ++    lrY+R+
       EPX74612.1 143 EIYSNTTrfalacnQSNKIIEPIQSRCAILRYSRL 177
                      33333334444444455555555566666666666 PP

>> MipZ  ATPase MipZ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00012     0.088      11      95 ..      63     147 ..      56     154 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00012
                 TSSHHHHHHHHHHHHHTTT--EEEEE--TTT-HHHHHHHHHHHHHHHHT------EEE-SSS-HHHHTTS-HHHHHHHHHHHHHH CS
        MipZ  11 GsGksttavhvavaLlkkGarvaaidldlrqrtlarylenraataerkglsLplpealalseaeeaeveeeeeaevaeleelvad 95 
                 G Gk+t  + +a  Ll +G r ++++l++  +     + n+ +  ++k+++Lp  ++  +   e+ +++ ++++  ++ +e+ ++
  EPX74612.1  63 GIGKTTSIMCLANMLLGSGCREGVLELNASDERGIDVVRNKIKGFAQKKVNLPPGRHKIIILDEADSMTAGAQQALRRTMEIYSN 147
                 89******************************************************99998888888888888877777766655 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       7.5   5.6e+03      65      88 ..      25      47 ..       8      53 .. 0.66
   2 ?    8.7   0.3    0.0022       1.6       1      24 [.      55      82 ..      55     149 .. 0.74
   3 ?    0.0   0.0         1   7.8e+02     113     125 ..     280     296 ..     250     307 .. 0.72

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 7.5
                G-SEEEEESGGG--HHHHHHHHHH CS
       AAA_5 65 egeilvlDEveraesevlnsLlsl 88
                + + +vlD+v   + e++++L  +
  EPX74612.1 25 KYRPVVLDDVV-GNEETVDRLKVI 47
                55668899998.888888888655 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0022
                EEEEE--SSSSHHHHHHHGGGGB....S CS
       AAA_5  1 dvlLvGppGtgKselaerlaaal....n 24
                ++++ G pG+gK++ ++ la +l    +
  EPX74612.1 55 HLIISGMPGIGKTTSIMCLANMLlgsgC 82
                7999*****************9985543 PP

  == domain 3  score: 0.0 bits;  conditional E-value: 1
                 ....-EEEEEESS--.. CS
       AAA_5 113 r...frviatanpld.r 125
                     frv+ t+n+ + +
  EPX74612.1 280 VtnmFRVVKTMNEIPeF 296
                 0345********99953 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.1    0.0007      0.52      21     104 ..      56     134 ..      42     161 .. 0.69

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.0007
      AAA_30  21 avltGpAGtGKttalkalreaweaag...grviglAptgkaAkvLaeelgieastiakllkrlkgrarlepgtllivDEagmvdtkq 104
                  ++ G +G GKtt++  l++++  +g   g + + A+ ++  +v+++++   a+   +l           +++++i DEa  + +  
  EPX74612.1  56 LIISGMPGIGKTTSIMCLANMLLGSGcreGVLELNASDERGIDVVRNKIKGFAQKKVNLP----P----GRHKIIILDEADSMTAGA 134
                 6899**************999998886655555677777777777766554443333333....2....245777778876654444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (341 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       544  (0.0303419); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        85  (0.00474092); expected 17.9 (0.001)
Passed Fwd filter:                        24  (0.00133861); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              24  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.41
# Mc/sec: 2485.46
//
Query:       EPX74613.1  [L=504]
Description: MCM binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      4e-65  220.4   3.1    6.1e-53  180.2   2.2    2.3  3  MCM_bind  Mini-chromosome maintenance replisome factor


Domain annotation for each model (and alignments):
>> MCM_bind  Mini-chromosome maintenance replisome factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.8   0.0   2.2e-14     4e-10       5     132 ..      47     165 ..      43     173 .. 0.78
   2 ?   -0.8   0.0     0.022   3.9e+02     186     226 ..     160     199 ..     139     206 .. 0.65
   3 !  180.2   2.2   3.4e-57   6.1e-53     260     576 ..     208     497 ..     190     501 .. 0.90

  Alignments for each domain:
  == domain 1  score: 38.8 bits;  conditional E-value: 2.2e-14
    MCM_bind   5 LkeesalssiPllnsvplhklkpnsLVrfrcmiQDm.ldpefylgaykvkntetnekrlrtgkYkDvlelkseeevdleseenstlerqtlycvpiPge 102
                 ++++ +l++iP+  + ++++lk+++L r+++miQD+ ++ ef+ ga+k++     ++ +r  +Y  +l+++++e++ +++++  + er  l+   iPge
  EPX74613.1  47 FANKYDLQKIPYYPNCNIKELKSGQLLRLQGMIQDTnFGHEFFAGAIKMN-----DQYWRGCRY--ILSYSEDESF-VDENKIALDERYSLFLTNIPGE 137
                 5677889****************************99***********99.....578999999..5677766776.6777779*************** PP

    MCM_bind 103 neWvkeseekeksqekvesststlssrkKR 132
                  +  k ++   + +e++e  +  + + + R
  EPX74613.1 138 LRSSKANSL--EPNEENELYKDLTAKYSNR 165
                 887766664..3444444444444444444 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.022
    MCM_bind 186 aekllnfplpdekskaclVkvYdeed.elklNdvlevvGvls 226
                 a+++ n  l  ++   + Vk Y +++ +l++ + ++++G+++
  EPX74613.1 160 AKYS-NRTL-AKEDFGFCVKCYGGMEtRLRVCQAVDMLGMYE 199
                 3332.3333.45667889******9999***********987 PP

  == domain 3  score: 180.2 bits;  conditional E-value: 3.4e-57
    MCM_bind 260 vPrlHailvrklehnnplleeeaaaeneesklleeakeireellklLtklLlgDelaAeylllhLlSrVysrkdvlalGkfslnlsnipkeeasefakk 358
                 +P lH i+++  +++  ++              eea ++r +ll+ + + LlgD++a+e lll LlS+V  r+d++ +G fslnl+n+     se a++
  EPX74613.1 208 LPILHLITFEDFKQSPVTY-----------PSEEEAGHLRLKLLTQF-NKLLGDNVASESLLLSLLSNVVHRADSFIVGSFSLNLTNCT----SEHASR 290
                 6888888888887665555...........2357899**********.66789***********************************9....888999 PP

    MCM_bind 359 LaelleqlvpkshylpltlenlNtlklvPkkdyetnrLvsGvLQLakgThLvlDEtqLeeGkLestGvenvkalknlielqkveYDFkYyqiefetdiq 457
                 + +l+++l  ++ + ++ +++lN+  l P+ d +   L  G LQLa+gT L+lDEt+L++G+L++tGv+nv  l+ l+++q++ + + + + +++td++
  EPX74613.1 291 IISLIKTLTKRTVVQKIDVNELNKEPLYPRSDGD--TLSIGRLQLAPGTLLILDETELSSGTLNDTGVRNVAFLSYLLSQQEITFAYPFSSYNIQTDVR 387
                 9******************************975..5999*********************************************************** PP

    MCM_bind 458 vLvlsegkSllpsdlqvplqpsskaselleelleaaksyleeeklnklRiYlttlrlleysiseevtkaieedfVemrqadrkvsaddlhrlLvlarLl 556
                 ++vls+gkS+lp + +   +         +e+l ++++ l ++ +++l +Yl + ++   +i +++ + i++++V++r++  +++++ l+  ++ +rL 
  EPX74613.1 388 IVVLSHGKSILPVNAVYASKF--------DETLMSVETSLPSDDIERLSNYLDM-WTRTADIPTDMLEFIQSNYVRSRRDGLQTNEKVLSIEINCSRLY 477
                 ************766544333........3444555666799**********85.678899************************************** PP

    MCM_bind 557 slSlGetslskekWkrakel 576
                 + Sl  + +s+++ ++a +l
  EPX74613.1 478 AKSLASNFVSRQHFEQASRL 497
                 *************9999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (504 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.31s 00:00:00.87 Elapsed: 00:00:00.48
# Mc/sec: 3187.99
//
Query:       EPX74614.1  [L=736]
Description: SUMO E3 ligase Pli1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-29  103.0   0.1    3.6e-29  102.0   0.1    1.6  1  PINIT     PINIT domain
    6.3e-24   83.5   4.7    1.1e-23   82.6   4.7    1.5  1  zf-MIZ    MIZ/SP-RING zinc finger
    7.3e-10   38.4   0.1    2.1e-09   36.9   0.0    1.8  2  SAP       SAP domain
    3.9e-09   36.2   1.5      1e-08   34.8   1.5    1.7  1  zf-Nse    Zinc-finger of the MIZ type in Nse subunit
  ------ inclusion threshold ------
       0.16   12.2   0.3        0.3   11.3   0.3    1.3  1  FYVE_2    FYVE-type zinc finger


Domain annotation for each model (and alignments):
>> PINIT  PINIT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.0   0.1     1e-32   3.6e-29       2     146 .]     120     259 ..     119     259 .. 0.93

  Alignments for each domain:
  == domain 1  score: 102.0 bits;  conditional E-value: 1e-32
       PINIT   2 lrfkkspFYeileelskpteleasskkrnsvsfsfklseeqveklakssrkekrvqyqlrlfcasedsksesseeqdiefPpq.leikvNgkevkanlr 99 
                 +rf+k+pFY+ile  ++p +++a    rn+vsfsf+l++ +++kl  s++k    ++++++f++ +d  +   +e+ +e+P++ +e++ N++  +an+r
  EPX74614.1 120 IRFRKTPFYDILEPFNTPFTIPACVGARNTVSFSFQLTPMALSKL-LSNPK----EFRVYFFSTPTD--TIGFGECLMEYPTPqMELRANNQVAHANYR 211
                 89********************99999******************.66677....7******97754..444789******755*************** PP

       PINIT 100 glknkpGtarPvditkllrlspa.etNrieityaltkkkYylvvylVk 146
                 glk+++Gt++P+dit+++ + ++   N++ i y++ +k+Y++vv lVk
  EPX74614.1 212 GLKGRSGTTNPADITDYITKYAGpPGNNVVIYYMNATKRYSAVVSLVK 259
                 **********************9999*******999***********8 PP

>> zf-MIZ  MIZ/SP-RING zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.6   4.7   3.2e-27   1.1e-23       1      49 [.     301     349 ..     301     350 .. 0.97

  Alignments for each domain:
  == domain 1  score: 82.6 bits;  conditional E-value: 3.2e-27
                 EESB-TTTSSB-SSEEEETT--SS--EEHHHHHHHHHHS---B-TTT-- CS
      zf-MIZ   1 vslkCplslsrikiPvrgekCkHlqCfdlesylelnertetWnCPvCsk 49 
                 +slkCpls++ri++Pvr+++CkH+qCfd++++le+n++t++W+CPvC+ 
  EPX74614.1 301 ISLKCPLSFTRISLPVRSSYCKHIQCFDARAFLEMNQQTPSWMCPVCNI 349
                 79*********************************************85 PP

>> SAP  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.9   0.0   5.8e-13   2.1e-09       3      34 ..      20      51 ..      19      52 .. 0.94
   2 ?   -2.5   0.1       1.3   4.6e+03      23      32 ..     277     286 ..     277     287 .. 0.88

  Alignments for each domain:
  == domain 1  score: 36.9 bits;  conditional E-value: 5.8e-13
                T--HHHHHHHHHHTT--TTS-HHHHHHHHHHH CS
         SAP  3 kltVaeLKeeLkkrGLptsGkKaeLieRLkey 34
                 l  ++LK++L+ +GL+ sG+K eLi+R+ke+
  EPX74614.1 20 GLIIPQLKDILRVFGLRLSGTKPELIARIKEF 51
                6889***************************9 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.3
                 -HHHHHHHHH CS
         SAP  23 kKaeLieRLk 32 
                 +K+ +++R+k
  EPX74614.1 277 TKEKIVDRIK 286
                 6999****98 PP

>> zf-Nse  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.8   1.5   2.9e-12     1e-08       2      57 .]     293     348 ..     292     348 .. 0.93

  Alignments for each domain:
  == domain 1  score: 34.8 bits;  conditional E-value: 2.9e-12
                 XXXXXSSBXXSB-TTTSSB-SSEEEESSS--E..EEHHHHHHHCTTTS-EE-SCCC-S CS
      zf-Nse   2 elaieeerislkCPltlqpfeePvtskkCpHv..FEreaIlelikrkktvkCPvagCs 57 
                 ++  ++  islkCPl++  +  Pv+s  C+H+  F+ +a le+ +++++  CPv  C+
  EPX74614.1 293 DIIATSTDISLKCPLSFTRISLPVRSSYCKHIqcFDARAFLEMNQQTPSWMCPV--CN 348
                 67777899***********************766********************..86 PP

>> FYVE_2  FYVE-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.3   8.4e-05       0.3      20     101 ..     271     348 ..     262     353 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 8.4e-05
      FYVE_2  20 klrkkeeeRlgelkeklekekskrellgnqaklgethCilCleefkllvnskrqCldCklnvCkkCsvenkkekvwlCkiCs 101
                 k+rk e    ++++++++ e+   ++++ ++ ++  +C l  ++  l v  +  C+  + +  ++    n++   w+C +C+
  EPX74614.1 271 KSRKIET--KEKIVDRIKSENEDTDIIATSTDISL-KCPLSFTRISLPVR-SSYCKHIQCFDARAFLEMNQQTPSWMCPVCN 348
                 4444443..4899***************9444433.34444455555444.346777777777777777************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (736 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       765  (0.0426683); expected 358.6 (0.02)
Passed bias filter:                      452  (0.0252106); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.65u 0.29s 00:00:00.94 Elapsed: 00:00:00.46
# Mc/sec: 4840.61
//
Query:       EPX74615.1  [L=134]
Description: 60S ribosomal protein L28/L44 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.1e-30  104.3   0.1      7e-30  104.1   0.1    1.0  1  Ribosomal_L28e  Ribosomal L28e protein family


Domain annotation for each model (and alignments):
>> Ribosomal_L28e  Ribosomal L28e protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.1   0.1   3.9e-34     7e-30       1     114 [.       7     125 ..       7     126 .. 0.95

  Alignments for each domain:
  == domain 1  score: 104.1 bits;  conditional E-value: 3.9e-34
  Ribosomal_L28e   1 LiWelvrnnnsFlvktrtsnkqtFsrepyNltglhsrkysglanskavtVree.kkgvvlvtkkk.erahkpakawekvkls.knsrkalkqiak 92 
                     LiW+++r+nn Flvk+++  + +F rep+N tg++ ++ysgl  ++av+++++   gvv+vtk+  ++a+kpak++ +  ++ k+srk++k++a 
      EPX74615.1   7 LIWQVIRENNRFLVKRSEFGGIQFNREPFNATGKNAQRYSGLSSDRAVGINANsPRGVVMVTKTNpKNAQKPAKLFRTDVIAnKSSRKTYKSVAG 101
                     8***************88899******************************665789999999999***************99************ PP

  Ribosomal_L28e  93 ll..kkyrpdlrkaalaRlskitq 114
                     ++  ++yrpdl + a+aR s+i+ 
      EPX74615.1 102 RVgkTGYRPDLLNVAIARSSAILA 125
                     ***9999**************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       266  (0.0148363); expected 358.6 (0.02)
Passed bias filter:                      206  (0.0114898); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.28s 00:00:00.69 Elapsed: 00:00:00.46
# Mc/sec: 872.72
//
Query:       EPX74616.1  [L=124]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-36  123.3   0.0    4.5e-36  123.1   0.0    1.0  1  DUF2015   Fungal protein of unknown function (DUF2015)


Domain annotation for each model (and alignments):
>> DUF2015  Fungal protein of unknown function (DUF2015)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.1   0.0   2.5e-40   4.5e-36       3     112 .]      13     119 ..      11     119 .. 0.96

  Alignments for each domain:
  == domain 1  score: 123.1 bits;  conditional E-value: 2.5e-40
     DUF2015   3 llvlvvatllyltrkkllpllpeaeeylysrlpssFeedieaGlsssnFdlseNiesgdsRaGLdeaakeeikkimkkrrvkFdeARliyteerlkkng 101
                 ++++++a ++y+tr+ + p+l+   +++ys++ +sFe+di++Gl+s++Fdl +N+ s+dsRaGLde + +eik imkk++++Fd+ARliy +++++kn+
  EPX74616.1  13 IILAIIAGITYATRSIWGPRLH---RFRYSSVHDSFESDIQNGLTSNSFDLFQNVLSQDSRAGLDEISSREIKGIMKKQQCSFDQARLIYLRDTMSKNN 108
                 67889999*********88887...688*********************************************************************** PP

     DUF2015 102 igpdGrPlDpk 112
                 i+p+G+PlD+k
  EPX74616.1 109 IDPSGLPLDSK 119
                 *********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       526  (0.0293379); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 881.99
//
Query:       EPX74617.1  [L=914]
Description: ENTH/VHS domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (914 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       813  (0.0453455); expected 358.6 (0.02)
Passed bias filter:                      272  (0.015171); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.65u 0.25s 00:00:00.90 Elapsed: 00:00:00.42
# Mc/sec: 6503.87
//
Query:       EPX74618.1  [L=633]
Description: hypothetical protein SOCG_02101 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
       0.17   12.1   9.1       0.59   10.4   1.2    3.8  4  FliJ             Flagellar FliJ protein
        9.1    6.2   6.5         18    5.3   0.1    3.4  3  Methyltransf_32  Methyltransferase domain


Domain annotation for each model (and alignments):
>> FliJ  Flagellar FliJ protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.1     0.012   1.1e+02      22      87 ..       8      71 ..       4      82 .. 0.79
   2 ?   10.4   1.2   6.6e-05      0.59       6      89 ..      88     173 ..      84     186 .. 0.87
   3 ?    1.0   0.0     0.053   4.7e+02      13      44 ..     198     230 ..     195     233 .. 0.84
   4 ?   -2.8   0.0      0.79   7.1e+03      60      86 ..     498     524 ..     497     529 .. 0.74

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.012
        FliJ 22 eeleqyrqeyqkqlsgeaqglsaaelrnyqafisaldeaiaqqkqelaqaekqvekareewqearq 87
                ++le+y++e+ +qls++   ++      ++  ++++ e  + +k++l++ + + +k  ++++e ++
  EPX74618.1  8 QSLENYYHEL-NQLSSDL-DIPFDLTIFRSLILNKISEHSSGLKKNLQNTRTKCDKLSSQLLELYK 71
                6778888888.5555555.68888888888899999999999999999999999999999998776 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 6.6e-05
        FliJ   6 eLaeaqrelqqaeekleeleqyrqeyqkqlsgea.q.glsaaelrnyqafisaldeaiaqqkqelaqaekqvekareewqearqer 89 
                  +++     ++ +++ ++  q  +e +k+ls++    g + +e+   ++f +  d++i+++k+  ++ ek+ + ++e+++ ++ e 
  EPX74618.1  88 HYQRLVSLHAKVRKEYDNKLQLVKEIRKKLSYHLfClGENSEEFSLNNSFVDVSDSKIEHLKRIQEKVEKKYHSRKENLLNKKNEI 173
                 56777777788888999999999999999999999889*******************************************99885 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.053
        FliJ  13 elqqaeekleeleqyrqeyqkqlsgea.qglsa 44 
                 ++++++ +le l q r++ +++ls+++ + +s+
  EPX74618.1 198 RINDYKGRLEFLAQRRENTSSRLSNRSdSRISI 230
                 67889999**************99998556665 PP

  == domain 4  score: -2.8 bits;  conditional E-value: 0.79
        FliJ  60 aiaqqkqelaqaekqvekareewqear 86 
                 +i++   ++ ++e qve++ +++++a+
  EPX74618.1 498 QIDKNNLDVGDLESQVEAQYNHFISAN 524
                 577777788888888888887777765 PP

>> Methyltransf_32  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.2      0.12   1.1e+03      64     125 ..      42      97 ..      37      98 .. 0.64
   2 ?    5.3   0.1     0.002        18      41      90 ..     122     171 ..     116     248 .. 0.72
   3 ?    2.6   0.2     0.013   1.2e+02      50     104 ..     306     368 ..     298     504 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.12
  Methyltransf_32  64 vekaekraeklgkkfnkrlsfaelsieeatssktltkkveaeeekeeqeekesvdvligLHa 125
                      +e+++ ++++l+   n+r+++ +ls++  +  k   +  +++++++e  ++++ + l++LHa
       EPX74618.1  42 SEHSSGLKKNLQ---NTRTKCDKLSSQLLELYK---CLGKTQSFQNELPSEKHYQRLVSLHA 97 
                      566666666776...556666666655554433...44446777777788888889999998 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.002
  Methyltransf_32  41 fvlalkekeyklkvvgidakeelvekaekraeklgkkfnkrlsfaelsie 90 
                      f l  +++e++l+   +d++++ +e+ ++++ek++kk+++r +   ++ +
       EPX74618.1 122 FCLGENSEEFSLNNSFVDVSDSKIEHLKRIQEKVEKKYHSRKENLLNKKN 171
                      55555445577778889******************999444443333322 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.013
  Methyltransf_32  50 yklkvvgidakeelvekaekraeklgkkfnkrlsfaelsieeatssktltkkve.........a 104
                       k ++++++++++l  + +++ +k+  ++++rl ++ ++++++t+++ ++ +++         +
       EPX74618.1 306 IKQEIHSLEVETHLRGELNALIRKYL-ALEARLYKESQTVRSSTAPTSKPFTLKrlrkdfqltR 368
                      56789999***********9999999.8999999999999999987766555555544444440 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (633 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1344  (0.0749624); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.23s 00:00:00.89 Elapsed: 00:00:00.41
# Mc/sec: 4650.66
//
Query:       EPX74619.1  [L=801]
Description: rRNA methyltransferase Spb1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-77  260.2  27.2    1.3e-77  260.2  27.2    3.6  3  Spb1_C    Spb1 C-terminal domain
    1.1e-52  178.7   0.0    2.5e-52  177.5   0.0    1.6  1  FtsJ      FtsJ-like methyltransferase
    6.9e-46  156.0   8.0    6.9e-46  156.0   8.0    5.3  5  DUF3381   Domain of unknown function (DUF3381)


Domain annotation for each model (and alignments):
>> Spb1_C  Spb1 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   3.8       1.3   8.1e+03      81     111 ..     352     382 ..     335     396 .. 0.49
   2 ?   -1.2   2.9      0.22   1.3e+03       6      47 ..     427     469 ..     422     481 .. 0.59
   3 !  260.2  27.2   2.2e-81   1.3e-77       3     211 .]     587     797 ..     486     797 .. 0.96

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 1.3
      Spb1_C  81 kkhskpekpitkeavaaikeklralnarpiK 111
                 ++ +++ +++ +++ a++k+  r  n+   K
  EPX74619.1 352 TQMDQELQHLNEAERAKVKRERRRANKHKQK 382
                 3333333333333333333333333333332 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.22
      Spb1_C   6 ddfevvpaeekeekdsddeeeeede.kidiltaealalaqqla 47 
                 ++ e+v++ee++e+++++eee ++e ++++l+ae  ++ +q +
  EPX74619.1 427 STPEIVATEEENEDSEESEEEYDSEdEQERLEAELDSMYSQYT 469
                 5557777776666666655555555345566666555555544 PP

  == domain 3  score: 260.2 bits;  conditional E-value: 2.2e-81
      Spb1_C   3 eedddfevvpaeekeekdsd..deeeeedekidiltaealalaqqlatgkktkedlidegfnryafndkdgLPeWFldDEkkhskpekpitkeavaaik 99 
                 ++++++e vp+ ++eek++d  +++++e e++di+taea++laq +a+++k+k+dlid+g+nr++f+ k+gLP+WFld+E++h+kp+kpitkeav+a++
  EPX74619.1 587 NRKEEIELVPSVAAEEKEDDwdSDSDNEGENVDIVTAEAMTLAQDIASHRKSKSDLIDDGYNRWSFQPKEGLPDWFLDEENHHNKPNKPITKEAVMALR 685
                 567778888888877777764455566666********************************************************************* PP

      Spb1_C 100 eklralnarpiKKVaEAkaRKklkaakkleklkkkaeliaededlsekeKakqieklmkkaakkkkkkkvkvvvakkankglsgrpkgvkgkykmVDkr 198
                 ek++ +narpiKK++EA++RKk++++++++++ kkae i+e+ +++e+eK k+i++lm++a+k+k+k++  +vvak+ankg+ +rpkgvkgkykmVD+r
  EPX74619.1 686 EKMKTINARPIKKILEAQGRKKMRTIRRMQNVSKKAEGITESGEMTESEKSKEIARLMSRAMKSKPKQRPALVVAKGANKGIRSRPKGVKGKYKMVDPR 784
                 *************************************************************************************************** PP

      Spb1_C 199 mKkdlRalkriak 211
                 mKk+lRa+kr++k
  EPX74619.1 785 MKKELRAQKRLDK 797
                 **********986 PP

>> FtsJ  FtsJ-like methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  177.5   0.0   4.2e-56   2.5e-52       1     177 []      25     201 ..      25     201 .. 0.99

  Alignments for each domain:
  == domain 1  score: 177.5 bits;  conditional E-value: 4.2e-56
                 CCCCHHHHHHHHHHHHT-S-TT-EEEECT-TTSHHHHHHCCT.T.-SEEEEEESSSSHHHTTEEEECS-CCCSSHHHHHCHCHHHSSEEEEEE--S-SS CS
        FtsJ   1 yrsRsayKLleidekfklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpmaplpgvttiqgditdpetiekikealserkvdlvvsDgapdv 99 
                 yrsR+a+KL ++++kf+++++ k v+Dl+aaPGgw qv+++ +++++ +v+vDl p++ +p+++t+  dit+ + + +++  l+  k+d+v++Dgap+v
  EPX74619.1  25 YRSRAAFKLVQLNQKFSFLEKAKVVIDLCAAPGGWLQVASRACKPGSLLVGVDLAPIRAIPNCQTFVEDITSDKCRSQLRGILKTWKADVVLHDGAPNV 123
                 9****************99***********************9999***************************************************** PP

                 -CHHHHHHHHHCCCCHHHHCCHCCCCECCCEEEECCCHCCCHHHHHHHHHCCEEEEEEEE-SS--CCG-EEEEEEEEC CS
        FtsJ 100 sgvhdldeylqsqLllaalelalkllkpggtfvlkifrgeeteallkqlkkfFekvsvvkPkssrsesseeflvcrgf 177
                    + +d+y q++L+l +++la++ l pggtfv+k+fr+++ ++ll  +k++F++v+ +kP+ssr+ s+e+f+vcrg+
  EPX74619.1 124 GAAWLQDAYGQAELVLMSMKLACEFLVPGGTFVTKVFRSRDYNNLLWVFKQLFNRVDATKPPSSRNVSAEIFVVCRGY 201
                 ****************************************************************************96 PP

>> DUF3381  Domain of unknown function (DUF3381)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.0   8.0   1.2e-49   6.9e-46       1     165 []     235     386 ..     235     386 .. 0.92
   2 ?   -2.6  10.0      0.69   4.1e+03     109     144 ..     435     468 ..     409     485 .. 0.56
   3 ?  -14.4  16.7         3   1.8e+04     102     102 ..     568     568 ..     469     641 .. 0.62
   4 ?    0.5   2.6     0.075   4.5e+02      86     152 ..     705     754 ..     652     766 .. 0.59
   5 ?   -5.4   3.6         3   1.8e+04     147     160 ..     787     800 ..     771     801 .] 0.51

  Alignments for each domain:
  == domain 1  score: 156.0 bits;  conditional E-value: 1.2e-49
                 XXXXXXXXXXXXXXXXXX--EEEHHHHHT-----HHHHH-SEEE--S.HHHHH.HHSSSSS-SSHHHHHH-SSS--HHHHHHHHHHHHHHHHH-XXXX. CS
     DUF3381   1 pekkkrkreGYeegdytlykelsvseFiksedpielLgkaneitfdk.eelkekilkhpktteEikelckDLkVLGkkdlkkLLkWrkklrkelgleek 98 
                 pekkkr+reGY+++dytl+k++s+seF+  +dpi++Lg++ ei+f + +e ++++++++ t e+++ +c+DL+VLGkkd++ LLkWr+++r elgl ++
  EPX74619.1 235 PEKKKRNREGYADDDYTLHKTVSASEFVLGNDPIQILGTSAEIVFPEeDEDSKRLKNLDITDEDVLIYCSDLQVLGKKDFRDLLKWRLRARSELGLGKR 333
                 79*******************************************997777888*****************************************9988 PP

                 ................XXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
     DUF3381  99 kekeekeeeeeedeeeeeeeeeeaeeeeldeeeeiekeleelkeeekkkkKrekkkankkkqkeiqr 165
                  e+ee              ++ ++e  + dee+++++el+ l+e e++k Kre+++ank+kqkei r
  EPX74619.1 334 PENEE--------------KTVVEEIPQVDEETQMDQELQHLNEAERAKVKRERRRANKHKQKEIVR 386
                 33333..............3445556677***********************************986 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.69
                 ......XXXXX..XXXXXXXXXXXXXXXXXXXXXXX CS
     DUF3381 109 eedeeeeeeeeeeaeeeeldeeeeiekeleelkeee 144
                 ee+  +e++ee+e+e +++de+e++e el+++ ++ 
  EPX74619.1 435 EEE--NEDSEESEEEYDSEDEQERLEAELDSMYSQY 468
                 111..1123334444455577778888888776654 PP

  == domain 3  score: -14.4 bits;  conditional E-value: 3
                 . CS
     DUF3381 102 e 102
                 e
  EPX74619.1 568 E 568
                 0 PP

  == domain 4  score: 0.5 bits;  conditional E-value: 0.075
                 HHHHHHH-XXXX.....................X..XXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
     DUF3381  86 rkklrkelgleekkekeekeeeeeedee....ee..eeeeeeaeeeeldeeeeiekeleelkeeekkkkKrek 152
                 rkk+r                      +    ++  +++e  +e+ e++e  e  ke+++l ++  k k +++
  EPX74619.1 705 RKKMR----------------------TirrmQNvsKKAEGITESGEMTE-SEKSKEIARLMSRAMKSKPKQR 754
                 11111......................02222112234444455555555.4456788888777666665554 PP

  == domain 5  score: -5.4 bits;  conditional E-value: 3
                 XXXXXXXXXXXXXX CS
     DUF3381 147 kkKrekkkankkkq 160
                 k+ r +k+  kkk+
  EPX74619.1 787 KELRAQKRLDKKKR 800
                 22233333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (801 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1829  (0.102013); expected 358.6 (0.02)
Passed bias filter:                      487  (0.0271627); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.83u 0.27s 00:00:01.10 Elapsed: 00:00:00.44
# Mc/sec: 5528.61
//
Query:       EPX74620.1  [L=254]
Description: ubiquinone biosynthesis protein Coq4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-93  311.1   0.0    3.8e-93  310.9   0.0    1.0  1  Coq4      Coenzyme Q (ubiquinone) biosynthesis protein Coq4


Domain annotation for each model (and alignments):
>> Coq4  Coenzyme Q (ubiquinone) biosynthesis protein Coq4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  310.9   0.0   2.1e-97   3.8e-93       1     221 []      30     251 ..      30     251 .. 0.99

  Alignments for each domain:
  == domain 1  score: 310.9 bits;  conditional E-value: 2.1e-97
        Coq4   1 yeghvplslleklllavgsaiaalvdpergdlvaalgettglpa.lerlrekmlsdeeGrriLkerpritsetldleklkklpentlGraYakfleken 98 
                 y+ghvpls+l++++l++gsai+ l  p rgd+++ lg+ +g+p+ l+rl ++ml+de+Gr+iL e+prits++l+l  l++lp ntlGr Y++++++e+
  EPX74620.1  30 YPGHVPLSPLQRIFLVAGSAIMGLKAPWRGDMISILGDSSGQPFfLRRLLNQMLADEVGRQILMEKPRITSKSLNLPFLRTLPLNTLGRIYVDWIDREH 128
                 99****************************************999****************************************************** PP

        Coq4  99 vspdtRapvryiddeelaYvmqRyrevHDflHvllglptnvegEiavkafefaqtglpmallsalfgplrlsskererlleeylpwalragkkakelln 197
                 vspdtR+p ry+dd+e aYvmqRyre+HDf+H+l+++ptn+egE+a+k++ef+++glp+ +lsalfgplrl++++ +++ ++y+pwa+r+g  ak+l+n
  EPX74620.1 129 VSPDTRSPTRYVDDPEEAYVMQRYRECHDFYHALCHMPTNIEGELAIKWLEFINMGLPVGALSALFGPLRLNCNQIAAFRKVYIPWAVRNGLVAKTLIN 227
                 *************************************************************************************************** PP

        Coq4 198 vywEeeletdleelrkelgiekpp 221
                 vywE+el +d++e+rk++gie +p
  EPX74620.1 228 VYWEKELTKDINEVRKRIGIEAAP 251
                 ********************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       366  (0.0204139); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1852.30
//
Query:       EPX74621.1  [L=301]
Description: COP9/signalosome complex subunit Csn5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      4e-34  117.1   0.3    7.9e-34  116.2   0.3    1.5  1  JAB       JAB1/Mov34/MPN/PAD-1 ubiquitin protease
    2.6e-06   27.2   0.0    4.3e-06   26.5   0.0    1.4  1  Prok-JAB  Prokaryotic homologs of the JAB domain


Domain annotation for each model (and alignments):
>> JAB  JAB1/Mov34/MPN/PAD-1 ubiquitin protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.2   0.3   8.8e-38   7.9e-34       3     117 ..      33     144 ..      32     145 .. 0.96

  Alignments for each domain:
  == domain 1  score: 116.2 bits;  conditional E-value: 8.8e-38
                 SCEEEEEHHHHHHHHHHHHHHHHHTS--EEEEEEEESSSEEEEEEEEEEESEEEESSECEEEEEHHHHHHHHHHHHHHHCTTSEEEEEEEESSSS-SS- CS
         JAB   3 vqavhleslvllkildhalrtekeeeevmGlliGelnddttveitnvfalpfeetekdvdavsldqeylekksellkklrgrervvGWYhshpditvwl 101
                 +++vh+++ +llk+l+h++++     evmG+++G+++d+  + i + falp+++te++v+a+++  ey  ++++l+k +   e+v+GWYhshp++++wl
  EPX74621.1  33 FKSVHIDAVALLKMLRHVSQGMPL--EVMGYVQGKVKDN-KLIILDAFALPVKGTETRVNAHEEADEYSVQYQTLCKSVHRYENVIGWYHSHPNYGCWL 128
                 689*********************..*************.999************************************555***************** PP

                 -HHHHHHHHHHHHHST CS
         JAB 102 sevdvrtqalyqrmde 117
                 s vdv+tq+++qr+++
  EPX74621.1 129 SGVDVETQKQNQRFQD 144
                 *************986 PP

>> Prok-JAB  Prokaryotic homologs of the JAB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.0   4.8e-10   4.3e-06       3     105 ..      41     151 ..      39     172 .. 0.76

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 4.8e-10
    Prok-JAB   3 svlsalvaharrahpeEtcGlllgkeseseevivvplvnewsn......rfeipdpedslarlkf.earerglevvgiwHSHpggsarPSetDrrdaaa 94 
                  +l ++++h+ +  p E  G++ gk  ++++ i+ +    +++      + + ++ e s + ++  +   r ++v+g +HSHp+ +   S  D ++ ++
  EPX74621.1  41 VALLKMLRHVSQGMPLEVMGYVQGKV-KDNKLIILDAFALPVKgtetrvNAHEEADEYSVQYQTLcKSVHRYENVIGWYHSHPNYGCWLSGVDVETQKQ 138
                 67899*********************.778888888776666677665533333444444444448999***************999999999999999 PP

    Prok-JAB  95 lar...vkalliiv 105
                 + r   + +++i++
  EPX74621.1 139 NQRfqdP-FVAIVI 151
                 8888763.333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (301 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       528  (0.0294495); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 2145.24
//
Query:       EPX74622.1  [L=77]
Description: hypothetical protein SOCG_02105 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.8e-09   36.9   0.9    4.4e-09   36.7   0.9    1.1  1  EF-hand_7  EF-hand domain pair
    6.6e-09   34.7   0.1      1e-05   24.7   0.3    2.4  2  EF-hand_1  EF hand
      3e-07   29.8   1.5    1.2e-05   24.8   0.3    2.8  3  EF-hand_6  EF-hand domain
    2.9e-06   27.0   1.5    5.4e-05   22.9   0.1    2.7  2  EF-hand_8  EF-hand domain pair
    1.4e-05   24.4   0.1      0.009   15.5   0.2    2.2  2  EF-hand_5  EF hand


Domain annotation for each model (and alignments):
>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.7   0.9   1.2e-12   4.4e-09       2      69 ..      13      72 ..      12      74 .. 0.93

  Alignments for each domain:
  == domain 1  score: 36.7 bits;  conditional E-value: 1.2e-12
   EF-hand_7  2 eklkeaFkelDtdgdgyldkeellrllrkifqgagegsklsdeelellfkefDtdkdGvisfdEFlkl 69
                e+ +eaF+++D+ + g++d e+l+r +         g++l++++l+l+++   t++  +++++EF +l
  EPX74622.1 13 EEAEEAFDLFDVTHKGFIDFEDLKRSCS------LLGEDLTQDQLQLMLEIAGTNG--RVNREEFAQL 72
                78899***********************......*****************77776..*******997 PP

>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.3   2.8e-09     1e-05       1      25 [.      14      38 ..      14      42 .. 0.90
   2 !    7.8   0.0   0.00071       2.5      14      27 ..      61      74 ..      60      76 .. 0.87

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 2.8e-09
                HHHHHHHHHTTTSSSEEEHHHHHHH CS
   EF-hand_1  1 elkeiFrefDkDgdGkIdfeEfkel 25
                e +e+F++fD+ + G+Idfe++k+ 
  EPX74622.1 14 EAEEAFDLFDVTHKGFIDFEDLKRS 38
                679*******************985 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.00071
                SSEEEHHHHHHHHH CS
   EF-hand_1 14 dGkIdfeEfkellk 27
                +G++++eEf +l+ 
  EPX74622.1 61 NGRVNREEFAQLWL 74
                8*********9985 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.3   3.4e-09   1.2e-05       2      27 ..      15      40 ..      14      43 .. 0.86
   2 ?   -0.1   0.1      0.33   1.2e+03      17      27 ..      46      56 ..      45      59 .. 0.85
   3 ?    2.5   0.0     0.051   1.8e+02      14      24 ..      61      71 ..      60      76 .. 0.85

  Alignments for each domain:
  == domain 1  score: 24.8 bits;  conditional E-value: 3.4e-09
   EF-hand_6  2 lreaFklfDkdgdGkidaeElrkalr 27
                 +eaF+lfD+++ G+id+e+l++ ++
  EPX74622.1 15 AEEAFDLFDVTHKGFIDFEDLKRSCS 40
                689******************98666 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.33
   EF-hand_6 17 idaeElrkalr 27
                +++++l+ +l 
  EPX74622.1 46 LTQDQLQLMLE 56
                79999999986 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.051
   EF-hand_6 14 dGkidaeElrk 24
                +G +++eE+ +
  EPX74622.1 61 NGRVNREEFAQ 71
                89*******87 PP

>> EF-hand_8  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.1     0.056     2e+02      24      36 ..      11      23 ..       1      24 [. 0.74
   2 !   22.9   0.1   1.5e-08   5.4e-05       1      54 [.      26      75 ..      26      76 .. 0.92

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.056
   EF-hand_8 24 seeevdilfrefD 36
                 +ee+++ f++fD
  EPX74622.1 11 MDEEAEEAFDLFD 23
                5789999999998 PP

  == domain 2  score: 22.9 bits;  conditional E-value: 1.5e-08
   EF-hand_8  1 ekgkItreelrrilrilglkkglseeevdilfrefDtdgdGkisfeEFcvller 54
                +kg I++e+l+r  ++lg    l+ ++++ ++  + t+  G+++ eEF +l+ +
  EPX74622.1 26 HKGFIDFEDLKRSCSLLGED--LTQDQLQLMLEIAGTN--GRVNREEFAQLWLH 75
                79**********66***977..************9995..89**********87 PP

>> EF-hand_5  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.2   2.5e-06     0.009       3      23 ..      17      37 ..      15      40 .. 0.90
   2 !    6.8   0.0    0.0014       4.9      14      24 ..      62      72 ..      61      73 .. 0.89

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 2.5e-06
                HHHHHH-SS-SSCE-HHHHHH CS
   EF-hand_5  3 dtFqaiDlNgDGkIskeELkt 23
                ++F+ +D+ + G+I++e Lk+
  EPX74622.1 17 EAFDLFDVTHKGFIDFEDLKR 37
                57*****************97 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0014
                SCE-HHHHHHH CS
   EF-hand_5 14 GkIskeELktl 24
                G++++eE+ +l
  EPX74622.1 62 GRVNREEFAQL 72
                9*******987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       421  (0.0234815); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.38u 0.27s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 553.02
//
Query:       EPX74623.1  [L=78]
Description: hypothetical protein SOCG_02106 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       480  (0.0267723); expected 358.6 (0.02)
Passed bias filter:                      248  (0.0138323); expected 358.6 (0.02)
Passed Vit filter:                         7  (0.000390429); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.27s 00:00:00.64 Elapsed: 00:00:00.42
# Mc/sec: 554.75
//
Query:       EPX74624.1  [L=387]
Description: CMGC/GSK protein kinase Gsk3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.3e-67  226.6   0.0    3.9e-67  226.4   0.0    1.0  1  Pkinase         Protein kinase domain
    6.4e-24   84.6   0.0    8.8e-24   84.2   0.0    1.2  1  Pkinase_Tyr     Protein tyrosine kinase
    5.5e-06   25.9   0.0    1.1e-05   25.0   0.0    1.4  1  Kinase-like     Kinase-like
    0.00067   19.6   0.0     0.0027   17.7   0.0    1.9  2  APH             Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.033   13.8   0.0      0.052   13.1   0.0    1.3  1  Choline_kinase  Choline/ethanolamine kinase
       0.07   12.5   0.0       0.12   11.8   0.0    1.2  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
       0.17   11.5   0.0       0.31   10.6   0.0    1.4  1  FTA2            Kinetochore Sim4 complex subunit FTA2


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  226.4   0.0   1.5e-70   3.9e-67       1     264 []      32     316 ..      32     316 .. 0.91

  Alignments for each domain:
  == domain 1  score: 226.4 bits;  conditional E-value: 1.5e-70
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEE......SSEEEEEEE--TTEB..HHHHHH. CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfee......kdelylvleyvegge..ladlle. 90 
                 y+  + +G+GsfG+V++++  e + + A+K++ ++k+ k+      rE++i++ +khpniv l+ ++++      + +l lvle+++++     +l++ 
  EPX74624.1  32 YTSSKVVGSGSFGVVIQVHLIEHDSKAAIKRVLQDKRFKN------RELQIMRLIKHPNIVDLIAYYYNtgekvdEVYLNLVLEFMPETIyrASRLYSr 124
                 678899****************************999883......69*******************9999998777888*******875434555556 PP

                 HHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEE.TTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHH.TTSCBSHHHHHHHHHHHH CS
     Pkinase  91 rkgslseeeakkiakqilegleylHskgiiHrDlKpeNiLid.ekgelKitDFGlakelessskltsfvgtseYlAPEvl.keneyskkvDvWslGvil 187
                 +k s+++ e+k +++q+l++l+y+H+ gi+HrD+Kp+N+L+d e+g lK++DFG ak l  +++  s++++++Y+APE++ ++++y++++D+Ws G+++
  EPX74624.1 125 QKLSMPMIEVKLYIYQLLRSLAYIHASGICHRDIKPQNLLLDpETGALKLCDFGSAKILVAGEPNVSYICSRYYRAPELIfGATNYTTAIDIWSTGCVM 223
                 6677*********************************************************************************************** PP

                 HHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCT...SHH...HHHTTS......................-HHHHHHHHHHT-SSGCCSTTHHHHHTS CS
     Pkinase 188 yelltgkppfsgekgkekvekeldqlekilkilg...etkeklpeasei......................seeakdllkkllkkdpkkRltaeellqh 261
                 +el+ g+p+f+   g++     +dql++i+kilg    ++ k+ ++                         + ea+dll kll+++p++Rlta e++ h
  EPX74624.1 224 AELMLGQPLFP---GES----GIDQLVEIIKILGtptREQIKTMNP--NymehrfpqirphpfsrvfsrsvPTEAIDLLAKLLQYTPTHRLTALEAMCH 313
                 ***********...544....899*********9754333333334..24599999******************************************* PP

                 GGG CS
     Pkinase 262 pyl 264
                 p++
  EPX74624.1 314 PFF 316
                 **8 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.2   0.0   3.4e-27   8.8e-24       4     207 ..      35     234 ..      32     269 .. 0.84

  Alignments for each domain:
  == domain 1  score: 84.2 bits;  conditional E-value: 3.4e-27
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSS......EEEEEE--TTEBHH.HHHHH CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeep......llivteyvkgGdLl.kfLrk 94 
                  +k +G+G+fG V++ +l     +++ k a+K + ++++ +      +e++im+ +khpniv l++ ++++++      l +v+e++++   + + L +
   EPX74624.1  35 SKVVGSGSFGVVIQVHLI----EHDSKAAIKRVLQDKRFK-----NRELQIMRLIKHPNIVDLIAYYYNTGEkvdevyLNLVLEFMPETIYRaSRLYS 123
                  6899**************....89999*****96666655.....57*******************995544466666899******99665268999 PP

                  TCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEE.ETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE.EEHHHHHHH CS
  Pkinase_Tyr  95 kekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLls.enkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk.ftsksDvWs 190
                  ++k ++ + ++  +++q+ + ++y+++  + Hrd+  +N Ll+ e+   k++DfG a+ +      + + +  ++  + apE ++  + +t++ D+Ws
   EPX74624.1 124 RQKLSMPMIEVKLYIYQLLRSLAYIHASGICHRDIKPQNLLLDpETGALKLCDFGSAKILV---AGEPNVSYICSRYYRAPELIFGATnYTTAIDIWS 218
                  9899999***********************************944669*********9993...334445556666778*****98766********* PP

                  HHHHHHHHHTTSSGTTT CS
  Pkinase_Tyr 191 fGvllwEiftlgespyp 207
                   G ++ E++  g+  +p
   EPX74624.1 219 TGCVMAELML-GQPLFP 234
                  ********97.666555 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.0   4.2e-09   1.1e-05     146     240 ..     135     223 ..     103     228 .. 0.81

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 4.2e-09
  Kinase-like 146 rlllTlqlirlaanLqakglvhgkftvdnllldek.gglmlggfta..Lvragtkvvlseve.kgfaPpEllgsrggytrknktkmthkldaWqlGlv 239
                  +l++  ql+r  a+++a g+ h +++++nllld++ g l+l +f++  +  ag+  v s ++ + +  pEl+           t++t ++d W  G v
   EPX74624.1 135 KLYI-YQLLRSLAYIHASGICHRDIKPQNLLLDPEtGALKLCDFGSakILVAGEPNV-SYICsRYYRAPELIFG--------ATNYTTAIDIWSTGCV 222
                  6667.89**************************86378******8633677888888.8888689999999866........4889999999999987 PP

  Kinase-like 240 i 240
                  +
   EPX74624.1 223 M 223
                  5 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   1.1e-06    0.0027     164     195 ..     149     179 ..      61     182 .. 0.82
   2 ?   -0.8   0.0      0.48   1.2e+03      92     143 ..     287     341 ..     268     357 .. 0.59

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 1.1e-06
                 S-EEEE-SS-SGGGEEEC..TTEEEEE---TT CS
         APH 164 lptvllHgDlhpgNllvdpddgrvtGviDfed 195
                  + +++H+D++p+Nll+dp+ g +  + Df+ 
  EPX74624.1 149 HASGICHRDIKPQNLLLDPETGAL-KLCDFGS 179
                 5899**************998887.5666665 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.48
                 HHHHHHHHHHHC.....CHHCH.-STTTB-SHHCHTCCHHHHHHCHHH.CCCGCCTCC CS
         APH  92 pellealgefla.....alhqvdpaalpladflaqdlellrqlesata.rllaselld 143
                  e+++ l+ +l      +l ++++   p++d+l++   ++ +l+++++ +++++ l++
  EPX74624.1 287 TEAIDLLAKLLQytpthRLTALEAMCHPFFDELRD---PNTKLPDSRNpQSPPRPLPE 341
                 45555555555566666666666667777777744...55555555443555554444 PP

>> Choline_kinase  Choline/ethanolamine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0     2e-05     0.052     146     171 ..     152     177 ..     113     186 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 2e-05
                     EEE-S--SGGGEEE.-CTTEEEE--G CS
  Choline_kinase 146 vfcHnDlqegNillnkeekklvlIDF 171
                       cH D+ ++N+ll+ e++ l l DF
      EPX74624.1 152 GICHRDIKPQNLLLDPETGALKLCDF 177
                     57************************ PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   4.5e-05      0.12     129     163 ..     143     174 ..     127     183 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 4.5e-05
         Kdo 129 rliaklhragvnHadlyaknillqqeeeeeaeiwl 163
                 r  a +h+ g++H+d+ ++n+ll+ e  ++  + l
  EPX74624.1 143 RSLAYIHASGICHRDIKPQNLLLDPET-GA--LKL 174
                 567789******************997.33..334 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00012      0.31     178     214 ..     138     180 ..     123     181 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00012
        FTA2 178 lpkllrdlkklhklgIvvrDlkeenyi....dg..kLvDlsaa 214
                 + +llr l  +h++gI +rD+k++n++     g  kL+D+++a
  EPX74624.1 138 IYQLLRSLAYIHASGICHRDIKPQNLLldpeTGalKLCDFGSA 180
                 6799*********************984443124478888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (387 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       435  (0.0242624); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2771.76
//
Query:       EPX74625.1  [L=299]
Description: C-5 sterol desaturase Erg31 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.1e-22   77.8  18.9    9.1e-22   77.8  18.9    1.9  2  FA_hydroxylase  Fatty acid hydroxylase superfamily


Domain annotation for each model (and alignments):
>> FA_hydroxylase  Fatty acid hydroxylase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0     0.055   9.8e+02      57      94 ..      32      66 ..      14      88 .. 0.55
   2 !   77.8  18.9   5.1e-26   9.1e-22       2     132 ..     123     248 ..     122     249 .. 0.88

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.055
  FA_hydroxylase 57 llllllllllgplsalllvlvlaallelliHsglhvsl 94
                    ++ l+ l++   +  +ll++++  l + +++ +  +++
      EPX74625.1 32 AISLFFLTW---MGGFLLYITFSSLSYRYVFDKSLMKH 66
                    444434433...44455555555555555555522233 PP

  == domain 2  score: 77.8 bits;  conditional E-value: 5.1e-26
  FA_hydroxylase   2 llallledfveYwvHrllHrvkllwrrlHkvHHsseaptalaalrahplealllallllllllllg.plsalllvlvlaallelliHsglhvslg 95 
                      l++l+ df+ Yw+Hr+lH+ ++++ rlHk+HH+    t++a+++++  + +l+ l++ l  ++++ + +++l+++++ ++++++iH g+ +s  
      EPX74625.1 123 PLFVLFSDFGIYWAHRFLHH-RWVYPRLHKLHHKWIICTPYASHAFKSGDGFLQSLPYHLFPFFFPlHKWTYLALFTFVNFWTIMIHDGKYISN- 215
                     5899************8886.7*********************************777655555555**********************43333. PP

  FA_hydroxylase  96 wllerllatpraHrlHHskneegnfgvllslwDrlfg 132
                        + +++++++H+ HH +++ +n+g++++l+Drl +
      EPX74625.1 216 ---NPIINGAAHHNGHHIYFN-YNYGQFTTLFDRLGN 248
                     ...3469**************.************965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (299 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       415  (0.0231469); expected 358.6 (0.02)
Passed bias filter:                      260  (0.0145016); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 2018.78
//
Query:       EPX74626.1  [L=190]
Description: Der1-like family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.1e-28   98.3  11.7      6e-28   98.1  11.7    1.0  1  DER1      Der1-like family


Domain annotation for each model (and alignments):
>> DER1  Der1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.1  11.7   3.4e-32     6e-28       2     175 ..      12     185 ..      11     189 .. 0.91

  Alignments for each domain:
  == domain 1  score: 98.1 bits;  conditional E-value: 3.4e-32
        DER1   2 PavTRllltatvvltllgrlelispaklvlsyelvvkkvQiwRlltsllyfsstgfsflinlyfiyqysskLEegsfrgrsadyvyll.lflavlitll 99 
                 P+vTR+l+ +t+++tl+++++ +   k+++++ l++ k  +wR +t++ly + +g++ ++ l f+ +++s+LEe s  +r+++++  + +++  l++l 
  EPX74626.1  12 PPVTRYLIFGTLLTTLAVNFGYLRELKVFFNWRLFLFKGEYWRAITTFLYIGPLGLEPILYLSFFLRFMSMLEEASPPPRTKNFMKTIsIVCGSLLVLS 110
                 9***********************************************************************************977623444444444 PP

        DER1 100 glladlvvLgqalilaivYvwskknkdvqvsFfgvlrvkakylPlvllafsfllgesv.vvsligilvghiyyfled 175
                  + +++ +  + +  +++Y+ws k +  +vs +g+++vka+y P+v++++  +  +s+ v +l+    ghiy+fl  
  EPX74626.1 111 YF-FHMPFAASYFSFSMLYIWSWKHPLYRVSILGLFDVKAPYVPWVMILLRWFRSGSFpVLDLLSASIGHIYFFL-Y 185
                 44.5799***********************************************9976369*************9.3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       420  (0.0234257); expected 358.6 (0.02)
Passed bias filter:                      210  (0.0117129); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.28s 00:00:00.70 Elapsed: 00:00:00.45
# Mc/sec: 1263.28
//
Query:       EPX74627.1  [L=558]
Description: cohesin loading factor Ssl3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      3e-79  267.1  22.5    2.9e-78  263.8  22.5    1.9  1  Cohesin_load  Cohesin loading factor
    3.2e-08   33.8   0.6      0.056   13.7   0.0    4.7  4  TPR_12        Tetratricopeptide repeat
    0.00036   20.0   0.3        5.4    6.3   0.2    3.6  3  TPR_MalT      MalT-like TPR region
      0.004   17.0   3.1          3    7.8   0.0    4.5  4  TPR_10        Tetratricopeptide repeat
     0.0054   16.8   2.2         11    6.5   0.1    4.3  4  TPR_8         Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.032   14.1   1.1         11    6.0   0.0    4.1  4  TPR_1         Tetratricopeptide repeat
      0.036   14.1   0.5        6.5    7.0   0.0    4.2  5  TPR_7         Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> Cohesin_load  Cohesin loading factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  263.8  22.5   1.2e-81   2.9e-78       2     593 ..      14     545 ..      13     548 .. 0.90

  Alignments for each domain:
  == domain 1  score: 263.8 bits;  conditional E-value: 1.2e-81
  Cohesin_load   2 evvelLlslaeeyltaAhevvskvkseeeleqYykLiatGikCLeavlkdfklpprqearvtlrLariLleETenideAeeylskailiaeknrlid 98 
                   +++ +L+ lae y+  A+++++       ++ +  L++ G++CL+avl d+ l+pr+e +++ r+++iLl++T+++++Ae++l++a+lia+++++++
    EPX74627.1  14 SRHLFLWPLAEVYFREAEKILQHH---GTTRAFGDLLTGGLRCLYAVLLDNALEPRVELITRKRICEILLHHTQEYADAESILNRAMLIAKQHNFVE 107
                   57899*****************99...99******************************************************************** PP

  Cohesin_load  99 lkfvcqfLlarllektnpkaAlksldeliedaet...........yqhnewvylfrllriqlslqtdkdnsaalenlqslaelanrkgdkklfvvls 184
                   +kf+ q+Llar++ kt+pka + +l ++i++ae+              +++ ++++++    ++q       + ++ + + ++a+  +++++++++s
    EPX74627.1 108 EKFSLQLLLARIFSKTSPKAGKVLLLRCIQEAEEyakvlqmygtqGIASAHKWVYEFYLCCSLFQG------VQQISKNIYNYAKAYNHEEMILLAS 198
                   **********************************99999999887445566666677734444444......7799999999999999999999999 PP

  Cohesin_load 185 lleallhlrrgspkdvlevlqeiiaaarslqldeeseqipqlkalllllellvslqkddvknvkekLkalqsfldelkdkkswsswsedgsiklkit 281
                    l++ l + +            i   +r++          q+++l+l++++  ++ +++v +++ekL+  +++l++ + k  w+s++ +++i  +i 
    EPX74627.1 199 VLSQDLAMEE------------I--PTRTH----------QIAILVLVTQIVKCISEGKVLQSREKLNTVHMLLESDTLK--WESSHVEFTIDGEI- 268
                   9999994443............3..34556..........*********************************9988877..***66666665555. PP

  Cohesin_load 282 ersglklifswLpkkdllaLlYllsglvnlykkktdksekflqkalrqleklklksnnessnslstlsekikwlsvikcyvkfyliliafvlknwkk 378
                        ++ ++wL+ +++++L+Yl+sg+++l + +++++++flq++lr+ +++       ++ ++++  e   w ++i  ++k yli   +++++++k
    EPX74627.1 269 -----SIRLKWLSINQIYILVYLISGICYLPETSSGRASRFLQEGLRISGDFV-----PHETTVNESFETDRWFHSIIDNLKCYLIAAHLSRSKFSK 355
                   .....89********************************************99.....899************************************ PP

  Cohesin_load 379 ankeleeletasnkleskllkelaplllyLeglyaqskgdlkaAlaqyketaarkskerelyilsllNlviIlesevseddkelnkllsqleplcsn 475
                   a+k+l++    sn            + ++L g+ +++kg +++A+ +y+ + ++ ++ ++++ils+lNl+ +l+++ +     +n+ l+ le++c++
    EPX74627.1 356 AEKLLSSNDVESN-----------IFRTLLNGMLKHKKGNFDEAECIYRRVIKNPGTPKDVFILSTLNLINLLQDSTE-----ANNSLEWLEKSCKE 436
                   ******6555554...........7889**********************************************5555.....999***99998887 PP

  Cohesin_load 476 spnknislanalllattslfepisineekssllealkaakaikntqllsillnlisaklfegeleeqtkkseralqlakksidysdglWvlvaetil 572
                     n    ++++l  ++++l+   +  ++ +sll+  + + +++ntql +++++ ++ +l  g+ e+++k++ +al la+ks   +d +W++ +++ l
    EPX74627.1 437 QRN----IVYSLWWMILKLSREGTHVQKTNSLLKLTQSSVELSNTQLQYVVFTELCTRL--GNYEQAEKMAISALTLARKS---KDNIWSFFSGKNL 524
                   666....556666666677666665566666666666667*******************..9*******************...************* PP

  Cohesin_load 573 aqlleqlgerakaeqteesld 593
                   + l+e l e +k++q++e+  
    EPX74627.1 525 EVLYEGLHEFEKLKQQKEENA 545
                   ***************999875 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.0   0.1    0.0014       3.5      12      35 ..      79     102 ..      69     123 .. 0.83
   2 !    5.6   0.0    0.0077        20      52      72 ..     376     396 ..     370     398 .. 0.79
   3 ?   -0.4   0.0      0.58   1.5e+03       3      29 ..     408     433 ..     406     438 .. 0.88
   4 !   13.7   0.0   2.2e-05     0.056      12      44 ..     487     517 ..     486     536 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0014
      TPR_12  12 vlrrlgrydeAlellekaleiarr 35 
                 +l++ ++y++A+++l++a+ ia++
  EPX74627.1  79 LLHHTQEYADAESILNRAMLIAKQ 102
                 45889**************99953 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.0077
      TPR_12  52 grlyralgryeeAlelleeal 72 
                 g+l ++ g+++eA+ ++++++
  EPX74627.1 376 GMLKHKKGNFDEAECIYRRVI 396
                 566678889999999998876 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.58
      TPR_12   3 atalnnlaavlrrlgrydeAlelleka 29 
                 +++l nl ++l+   +   +le+lek+
  EPX74627.1 408 LSTL-NLINLLQDSTEANNSLEWLEKS 433
                 5677.9999*****9********9997 PP

  == domain 4  score: 13.7 bits;  conditional E-value: 2.2e-05
      TPR_12  12 vlrrlgrydeAlellekaleiarrllGpdhplt 44 
                 +++rlg+y++A+++   al +ar++  +d+ + 
  EPX74627.1 487 LCTRLGNYEQAEKMAISALTLARKS--KDNIWS 517
                 6789*******************99..887665 PP

>> TPR_MalT  MalT-like TPR region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.3   0.2    0.0021       5.4     286     316 ..      76     106 ..      28     141 .. 0.70
   2 !    5.4   0.0     0.004        10      59     108 ..     349     397 ..     342     404 .. 0.80
   3 ?    3.7   0.2     0.013        34      66     114 ..     464     512 ..     415     532 .. 0.65

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0021
    TPR_MalT 286 qalalqaqgreeeAlaaLeqALeLAepegyi 316
                  +++l+ +++  +A + L +A+ +A++ +++
  EPX74627.1  76 CEILLHHTQEYADAESILNRAMLIAKQHNFV 106
                 3455555666666666666666666666665 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.004
    TPR_MalT  59 AlqalqeaeklarqadslhvallallqqaeilvaqGrLheAletyeqalq 108
                 +++ +++aekl+ + + +   ++ +l  +++  ++G ++eA+++y++ ++
  EPX74627.1 349 SRSKFSKAEKLL-SSNDVESNIFRTLLNGMLKHKKGNFDEAECIYRRVIK 397
                 566788888888.5555555677777799999999999999999999886 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.013
    TPR_MalT  66 aeklarqadslhvallallqqaeilvaqGrLheAletyeqalqlateqg 114
                 + kl+++   l +++l+++  +e+ +  G  ++A+++   al+la++++
  EPX74627.1 464 LLKLTQSSVELSNTQLQYVVFTELCTRLGNYEQAEKMAISALTLARKSK 512
                 3344444444555666666666666666666666666666666666655 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.1      0.03        76      11      34 ..      79     102 ..      78     104 .. 0.88
   2 ?   -1.0   0.1      0.71   1.8e+03      19      32 ..     137     149 ..     136     149 .. 0.88
   3 ?    2.4   0.0     0.061   1.6e+02      10      29 ..     377     396 ..     376     397 .. 0.83
   4 !    7.8   0.0    0.0012         3      13      34 ..     489     510 ..     487     512 .. 0.91

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.03
      TPR_10  11 alrqrgrydeAealleealairrr 34 
                 +l+++++y++Ae +l +a+ i ++
  EPX74627.1  79 LLHHTQEYADAESILNRAMLIAKQ 102
                 68999*************998876 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.71
      TPR_10  19 deAealleealair 32 
                 +eAe++  ++l+++
  EPX74627.1 137 QEAEEY-AKVLQMY 149
                 89****.9999987 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.061
      TPR_10  10 nalrqrgrydeAealleeal 29 
                 ++ ++ g++deAe ++++++
  EPX74627.1 377 MLKHKKGNFDEAECIYRRVI 396
                 566889*******9999987 PP

  == domain 4  score: 7.8 bits;  conditional E-value: 0.0012
      TPR_10  13 rqrgrydeAealleealairrr 34 
                 +++g+y++Ae++++ al + r+
  EPX74627.1 489 TRLGNYEQAEKMAISALTLARK 510
                 689***************9987 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.47   1.2e+03      12      34 .]      81     103 ..      79     103 .. 0.84
   2 !    6.0   0.0    0.0065        17       8      29 ..     376     397 ..     375     398 .. 0.92
   3 ?   -2.6   0.0       3.7   9.4e+03      17      30 ..     423     436 ..     416     439 .. 0.72
   4 !    6.5   0.1    0.0045        11      11      33 ..     488     510 ..     486     511 .. 0.88

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.47
                 HHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8  12 lklgdyeeAkeyyekaleldpdn 34 
                 + +++y  A++ +++a  +++++
  EPX74627.1  81 HHTQEYADAESILNRAMLIAKQH 103
                 6678999*********9998875 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.0065
                 HHHHHHTT-HHHHHHHHHHHHH CS
       TPR_8   8 gsiylklgdyeeAkeyyekale 29 
                 g++ +k+g+++eA+  y+++++
  EPX74627.1 376 GMLKHKKGNFDEAECIYRRVIK 397
                 78999************99987 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 3.7
                 HHHHHHHHHHHHHH CS
       TPR_8  17 yeeAkeyyekalel 30 
                  +++ e++ek ++ 
  EPX74627.1 423 ANNSLEWLEKSCKE 436
                 56788899998775 PP

  == domain 4  score: 6.5 bits;  conditional E-value: 0.0045
                 HHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8  11 ylklgdyeeAkeyyekaleldpd 33 
                 +  lg+ye+A++    al+l+++
  EPX74627.1 488 CTRLGNYEQAEKMAISALTLARK 510
                 568***********999999986 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       1.2     3e+03      20      30 ..      23      33 ..      20      37 .. 0.78
   2 ?   -0.5   0.0      0.49   1.3e+03       5      22 ..     341     358 ..     339     361 .. 0.83
   3 ?    3.1   0.0     0.036        93       8      21 ..     376     389 ..     375     397 .. 0.78
   4 ?    6.0   0.0    0.0043        11      11      31 ..     488     508 ..     486     511 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 1.2
                HHHHHHHHHHH CS
       TPR_1 20 AleyyekALel 30
                A+ y+++A ++
  EPX74627.1 23 AEVYFREAEKI 33
                99999999776 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.49
                 HHHHHHHHHTT-HHHHHH CS
       TPR_1   5 ynlGnayfklgkydeAle 22 
                 + l +a+++  k+ +A++
  EPX74627.1 341 CYLIAAHLSRSKFSKAEK 358
                 5677899999******98 PP

  == domain 3  score: 3.1 bits;  conditional E-value: 0.036
                 HHHHHHTT-HHHHH CS
       TPR_1   8 GnayfklgkydeAl 21 
                 G++ +k+g++deA+
  EPX74627.1 376 GMLKHKKGNFDEAE 389
                 67779********8 PP

  == domain 4  score: 6.0 bits;  conditional E-value: 0.0043
                 HHHTT-HHHHHHHHHHHHHHS CS
       TPR_1  11 yfklgkydeAleyyekALeln 31 
                 + +lg+y++A++    AL+l 
  EPX74627.1 488 CTRLGNYEQAEKMAISALTLA 508
                 779********9988888876 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.1      0.66   1.7e+03      10      26 ..      81      97 ..      77     103 .. 0.77
   2 ?   -3.8   0.0         7   1.8e+04       3      11 ..     114     122 ..     112     123 .. 0.81
   3 ?   -2.1   0.0       2.1   5.5e+03       8      21 ..     346     359 ..     342     360 .. 0.86
   4 ?    0.8   0.0      0.24   6.2e+02      11      27 ..     381     395 ..     376     404 .. 0.83
   5 ?    7.0   0.0    0.0026       6.5       7      27 ..     486     506 ..     485     514 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.66
       TPR_7 10 srlGdyeeAielyeqsL 26
                +  ++y++A++++ +++
  EPX74627.1 81 HHTQEYADAESILNRAM 97
                56799*****9998844 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 7
       TPR_7   3 lnLarlysr 11 
                 l Lar++s+
  EPX74627.1 114 LLLARIFSK 122
                 579999986 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 2.1
       TPR_7   8 lysrlGdyeeAiel 21 
                 ++ ++ ++++A++l
  EPX74627.1 346 AHLSRSKFSKAEKL 359
                 789999*****987 PP

  == domain 4  score: 0.8 bits;  conditional E-value: 0.24
       TPR_7  11 rlGdyeeAielyeqsLa 27 
                 + G+++eA+ +y++  +
  EPX74627.1 381 KKGNFDEAECIYRR--V 395
                 78******999998..4 PP

  == domain 5  score: 7.0 bits;  conditional E-value: 0.0026
       TPR_7   7 rlysrlGdyeeAielyeqsLa 27 
                 +l+ rlG+ye+A++    +L 
  EPX74627.1 486 ELCTRLGNYEQAEKMAISALT 506
                 589*********998766554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (558 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       645  (0.0359752); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 3767.71
//
Query:       EPX74628.1  [L=405]
Description: queuine tRNA-ribosyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   7.8e-140  466.0   0.0   9.1e-140  465.8   0.0    1.0  1  TGT       Queuine tRNA-ribosyltransferase


Domain annotation for each model (and alignments):
>> TGT  Queuine tRNA-ribosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  465.8   0.0  5.1e-144  9.1e-140       2     348 ..      20     379 ..      16     381 .. 0.97

  Alignments for each domain:
  == domain 1  score: 465.8 bits;  conditional E-value: 5.1e-144
                 TEEEEEEEETTEEEEESEEEEBETTSSBTTB-HHHHH.HTTES-EEEEHHHHHHTTTHHHHHHTTHHHHHHT--S-EEEE-SHHHHHHH.E..EEESSE CS
         TGT   2 gaRlGklelphgtietPafmpvgtqgtvkgltpdelkeelgaqiilsntyhlelrpgeelvakagglhkflgwdkpiltdsggfqvfsl.k..kiteeg 97 
                 +aR++ lelphg++e P+fmpvgtq+++kg+ pd+l + +g+qi+l+ntyhl l+pg+e+++  gg+hk+ +w++++ltdsggfq++sl k  +iteeg
  EPX74628.1  20 RARASVLELPHGPVEAPVFMPVGTQASLKGVLPDQL-DRMGCQIMLNNTYHLGLKPGKEILDTIGGAHKLQSWKRNLLTDSGGFQMVSLlKlaTITEEG 117
                 59**********************************.589************************************************99556****** PP

                 EEEE-TTTS-EEEE-HHHHHHHHHHHT-SEEE-------SS--HHHHHHHHHHHHHHHHHHHHHH.....SEEEEEE--TT-HHHHHHHHHHHHHH--S CS
         TGT  98 vsfqsridGskvlltpeesieiqeklgsDiimalddvvpspaskkrveksverTlrwldrcleah.....qalfgivqGglyedlreesaeelakrdfd 191
                 v+f s+ dG  +lltpe+sie+q+++gsDi+m+lddvv++ ++  r+e+++ r++rwldrcl+ah     q+lf+i+qGgl++ lre +++e++krd++
  EPX74628.1 118 VTFLSPRDGTPMLLTPEHSIELQNTIGSDIMMQLDDVVHTLTEDVRMEEAMYRSIRWLDRCLKAHkntetQNLFCIIQGGLNKRLREICCKEMMKRDTP 216
                 *********************************************************************999*************************** PP

                 EEEE-SSSSSSHHHHHHHHHHHHGGGS-TTS-EEETTB-SHHHHHHHHHTT--EEEESHHHHHHHTTEEEETTEEEETTSGGGTT--SBSSSS--SHHH CS
         TGT 192 gyaigGlsvgeekeellevveavtellpedkprylmGvgtPedlleavalGvDmfdcvyptrtarngraltsegelnlknakyaedfspldegCsCytC 290
                 g+aigGls+geek+ ++e+v+++t  lpe+kprylmGvg+ edl+++valG+Dmfdcvyptrtar+g+alt++g lnl+n ++++d spld++C+C++C
  EPX74628.1 217 GIAIGGLSGGEEKRSFCEIVHTCTGILPESKPRYLMGVGYAEDLVVCVALGMDMFDCVYPTRTARFGNALTRNGILNLRNRRFKTDSSPLDTECQCPCC 315
                 *************************************************************************************************** PP

                 .HH......-BHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHH CS
         TGT 291 .kn......ytraylhhllktkemlgaiLltiHNlhyylelfkriReaIkegtfeefveefarky 348
                   +       tra l +l+ +ke++ga+L+tiHN+++ l+l++++R++I +++f++fv++f+ k+
  EPX74628.1 316 iPKekggwgITRAFLSSLV-SKETVGAHLMTIHNTQFQLQLMNDMRTSIIKDCFPQFVKDFFIKW 379
                 733466666*********8.9999*************************************9877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (405 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       530  (0.029561); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 2958.84
//
Query:       EPX74629.1  [L=659]
Description: inner centromere protein Mis6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.5e-23   80.8   3.9    5.1e-22   78.3   0.1    2.4  2  CENP-I      Mis6
  ------ inclusion threshold ------
        1.3    9.4   6.4          3    8.2   0.0    3.9  4  EntA_Immun  Enterocin A Immunity


Domain annotation for each model (and alignments):
>> CENP-I  Mis6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.3   0.1   5.7e-26   5.1e-22      74     252 ..      25     209 ..      10     240 .. 0.86
   2 !    3.1   0.6    0.0035        31     328     391 ..     259     322 ..     235     342 .. 0.89

  Alignments for each domain:
  == domain 1  score: 78.3 bits;  conditional E-value: 5.7e-26
      CENP-I  74 vslkknevlekhlktvenvalkkGlapeaidillnvalsG..kfadavntrllkclipatvisedsvvkavswl...cvgkcsgnikvlflrwliamfd 167
                 v+   ++ + + l+  + +a ++Gl+ eai++llnv+ls   +f ++    ++k+l p+  +s    vk +s l    v+   + +   +l wl  +++
  EPX74629.1  25 VPTGSKKAISNRLRQFQGLASQEGLTNEAIEVLLNVILSTntRFDKSQLIIIVKSLYPKQFVSHFIAVKIISSLdpyGVRHAYAYQ-EKLLNWLAHIYE 122
                 555566788999**************************954489****************99998888888776332677776654.45689******* PP

      CENP-I 168 fidhkeqvnslyGfffaflqddklcpyvchllylltrkenvkpfrvrklldlqakmGm..qshlqallslyklfapelvsislpvkk 252
                 f+++k++   +yG++f fl+  +l p +  ll l t++  +k fr+ +ll l  k G    +++  ll  yk + p+++  s+ ++ 
  EPX74629.1 123 FLEEKDRFARFYGVLFHFLDYVTLRPSLVRLLILTTKHSYIKRFRIHQLLSLYQKPGNanDPYILELLHTYKQHYPDVIIGSFQQRG 209
                 *******************************************************996336899*************9987777665 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.0035
      CENP-I 328 stdesfpveqlqtfpqllenihclelpsqmgsvlknslllhylncvkdesvllrlyywlsqtlq 391
                 ++ e +p +++ t +ql     +++ p q++++l++++++ y   +++  ++ +l+ wl +tl 
  EPX74629.1 259 NKLENVPLNEVFTVQQLSSAFEKIKQPNQVAALLRSNVFFLYYRLLNNPILVNKLTEWLYTTLY 322
                 455789999*********************************9999999999999999999985 PP

>> EntA_Immun  Enterocin A Immunity
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.1     0.033     3e+02       2      58 ..      51     105 ..      50     117 .. 0.83
   2 ?    8.2   0.0   0.00034         3       5      33 ..     168     196 ..     165     198 .. 0.94
   3 ?   -3.5   0.1       1.6   1.4e+04      19      28 ..     524     535 ..     515     541 .. 0.63
   4 ?   -2.2   0.1       0.6   5.4e+03      29      53 ..     592     615 ..     591     625 .. 0.77

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.033
  EntA_Immun   2 eellnelynlildpeikeneelrevLltaknklekgknvsvvasrLeqelrsyalkn 58 
                 +e+++ l n il+ +++ +   ++++  +k    k+    ++a+++  +l +y + +
  EPX74629.1  51 NEAIEVLLNVILSTNTRFDK--SQLIIIVKSLYPKQFVSHFIAVKIISSLDPYGVRH 105
                 689999**************..****9999999999888888888888888888854 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.00034
  EntA_Immun   5 lnelynlildpeikeneelrevLltaknk 33 
                 +++l +l+  p + +++++ e+L+t+k+ 
  EPX74629.1 168 IHQLLSLYQKPGNANDPYILELLHTYKQH 196
                 7999**********************985 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 1.6
  EntA_Immun  19 enee..lrevLl 28 
                 ++ +  lre+L 
  EPX74629.1 524 NEDQrdLREQLK 535
                 333345888885 PP

  == domain 4  score: -2.2 bits;  conditional E-value: 0.6
  EntA_Immun  29 taknklekgknvsvvasrLeqelrs 53 
                 ++++k  +++++ +++++L +   +
  EPX74629.1 592 QYLKK-KQEEDPTFILTSLTNLTKP 615
                 77888.8999999999999886555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (659 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       827  (0.0461264); expected 358.6 (0.02)
Passed bias filter:                      474  (0.0264376); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.28s 00:00:00.89 Elapsed: 00:00:00.42
# Mc/sec: 4673.78
//
Query:       EPX74630.1  [L=209]
Description: phosphoglycerate mutase family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-37  128.3   0.0    3.5e-37  128.0   0.0    1.1  1  His_Phos_1  Histidine phosphatase superfamily (branch 1)


Domain annotation for each model (and alignments):
>> His_Phos_1  Histidine phosphatase superfamily (branch 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.0   0.0     2e-41   3.5e-37       1     185 [.       3     186 ..       3     195 .. 0.88

  Alignments for each domain:
  == domain 1  score: 128.0 bits;  conditional E-value: 2e-41
                 EEEEE---BTTB--....TT----B-HHHHHHHHHHHHHHTTS---EEEE-SSHHHHHHHHHHHHCTT.--EEE-GGGS----GGGTT-B.HHHHHH.. CS
  His_Phos_1   1 lyLvRHGetewnaegrlqgrtdvpLteeGreqAealaerlagepidaiysSplkRarqTaeliaealg.lpveldegLrEidfGdweglttaeiaeeyp 98 
                 ++L+RHG+te n+ g+lqg  d+ L+e+G+ qA+ l+ rl++ +id+i++S +kR+r+T ++++e +  +p+e  + +rE+ +G++eg++  e+++   
  EPX74630.1   3 VFLIRHGQTEQNKVGILQGSVDTSLSETGQLQAKLLGSRLSSLNIDQIFCSSMKRCRETIKPLLELRPeIPIEYSDLIRERIYGELEGMNVVEAKRL-- 99 
                 68**************************************************************98889********************66666665.. PP

                 HSHHHHHHHHH-GGG-BS-BHHHHHHHHHHHHHHHHHHTTTSE..EEEEE-HHHHHHHHHHHHT--GGGGGGB--......-TT-EEEEEE-SS- CS
  His_Phos_1  99 eeleawlrdpadvrppggEsledvaaRvaaaleelaarheget..vlvVsHggvirallarllglpleelrrlel......dnaslsvlefdegg 185
                   +++ + d +      gE +  + +R+++++ee +   ++e+  v+v +Hggvi+al a++++ +  ++++ +l       n+s++++e++++g
  EPX74630.1 100 --MGTKHPDYY------GEGFTSLKQRLVKFWEEKVVPLREEKkcVVVLCHGGVINALRAHFMEEKGYTYDHTKLekkiltVNTSITEIEVTPEG 186
                 ..554444444......****************655544444447******************9998889988888888999********99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       559  (0.0311785); expected 358.6 (0.02)
Passed bias filter:                      514  (0.0286686); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1480.35
//
Query:       EPX74631.1  [L=715]
Description: RNA-binding protein Puf3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.7e-64  208.6  20.0    1.1e-07   31.1   0.3    8.7  8  PUF       Pumilio-family RNA binding repeat
  ------ inclusion threshold ------
      0.074   13.7   0.5        7.6    7.2   0.0    3.3  3  MgtE_N    MgtE intracellular N domain


Domain annotation for each model (and alignments):
>> PUF  Pumilio-family RNA binding repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.0   1.1e-09   9.7e-06       2      33 ..     379     410 ..     378     412 .. 0.92
   2 !   28.9   0.2   6.4e-11   5.7e-07       2      34 ..     416     448 ..     415     449 .. 0.94
   3 !   28.8   0.1   6.6e-11     6e-07       1      34 [.     451     484 ..     451     485 .. 0.88
   4 !   31.1   0.3   1.3e-11   1.1e-07       2      35 .]     488     521 ..     487     521 .. 0.92
   5 !   24.8   0.0   1.2e-09   1.1e-05       2      28 ..     524     549 ..     523     556 .. 0.80
   6 !   28.1   0.1   1.1e-10     1e-06       2      35 .]     559     592 ..     558     592 .. 0.94
   7 !   25.8   0.1   6.1e-10   5.4e-06       2      34 ..     595     627 ..     594     628 .. 0.89
   8 !   23.8   0.0   2.7e-09   2.4e-05       9      34 ..     645     670 ..     644     671 .. 0.85

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 1.1e-09
                 HGGGHHHHHTSTTHHHHHHHHHHHSCHHHHHH CS
         PUF   2 ikgnlvqLstdqyGnyvvQkllehateeqkkl 33 
                 i+gn+v  s+dqyG++++Q+ l ++tee+k+ 
  EPX74631.1 379 ILGNVVLFSSDQYGSRFIQQKLATCTEEEKEA 410
                 789*************************9975 PP

  == domain 2  score: 28.9 bits;  conditional E-value: 6.4e-11
                 HGGGHHHHHTSTTHHHHHHHHHHHSCHHHHHHH CS
         PUF   2 ikgnlvqLstdqyGnyvvQkllehateeqkkli 34 
                  ++n++qL+ d +Gnyv+Qk+le+   eqk+l+
  EPX74631.1 416 VSDNCLQLMMDIFGNYVIQKFLEYGNAEQKQLL 448
                 579****************************97 PP

  == domain 3  score: 28.8 bits;  conditional E-value: 6.6e-11
                 HHGGGHHHHHTSTTHHHHHHHHHHHSCHHHHHHH CS
         PUF   1 sikgnlvqLstdqyGnyvvQkllehateeqkkli 34 
                 +ikg+   L+++ yG++vvQk +eh + eq+  i
  EPX74631.1 451 KIKGHTFILAVHMYGCRVVQKAIEHISAEQQIEI 484
                 68999999*****************888887666 PP

  == domain 4  score: 31.1 bits;  conditional E-value: 1.3e-11
                 HGGGHHHHHTSTTHHHHHHHHHHHSCHHHHHHHH CS
         PUF   2 ikgnlvqLstdqyGnyvvQkllehateeqkklil 35 
                 ++ +++++++dq+Gn+v+Qk +e+ ++e  ++i+
  EPX74631.1 488 LDSHVLECVCDQNGNHVIQKSIECIDSERLDFIF 521
                 6789********************9999999987 PP

  == domain 5  score: 24.8 bits;  conditional E-value: 1.2e-09
                 HGGGHHHHHTSTTHHHHHHHHHHHSCH CS
         PUF   2 ikgnlvqLstdqyGnyvvQkllehate 28 
                 +++ +++Ls ++yG++v+Q+++e+  +
  EPX74631.1 524 LRPQIHVLSAHPYGCRVIQRIIEK-FT 549
                 57899******************6.33 PP

  == domain 6  score: 28.1 bits;  conditional E-value: 1.1e-10
                 HGGGHHHHHTSTTHHHHHHHHHHHSCHHHHHHHH CS
         PUF   2 ikgnlvqLstdqyGnyvvQkllehateeqkklil 35 
                 ++++ +qL + qyGnyvvQ++l+  +e++kk+++
  EPX74631.1 559 LLPYSLQLTQGQYGNYVVQHILKEGSEKDKKFVF 592
                 57999*************************9986 PP

  == domain 7  score: 25.8 bits;  conditional E-value: 6.1e-10
                 HGGGHHHHHTSTTHHHHHHHHHHHSCHHHHHHH CS
         PUF   2 ikgnlvqLstdqyGnyvvQkllehateeqkkli 34 
                 i +nl++Ls+++++++vv++++ + +e ++ +i
  EPX74631.1 595 IAKNLLYLSCHKFASNVVERCISYISEDDRAYI 627
                 5689*******************9999988776 PP

  == domain 8  score: 23.8 bits;  conditional E-value: 2.7e-09
                 HHTSTTHHHHHHHHHHHSCHHHHHHH CS
         PUF   9 LstdqyGnyvvQkllehateeqkkli 34 
                 +++d+y+nyvvQklle +  ++++l+
  EPX74631.1 645 MMKDKYANYVVQKLLEASNDKERDLL 670
                 79**************8777777765 PP

>> MgtE_N  MgtE intracellular N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.36   3.2e+03      47      70 ..     401     424 ..     393     449 .. 0.59
   2 ?    7.2   0.0   0.00085       7.6      21      73 ..     472     524 ..     467     563 .. 0.59
   3 ?    2.6   0.1     0.023     2e+02      52      82 ..     610     640 ..     579     664 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.36
                 HCS-HHHHHHHHCCS-HHHHHHHH CS
      MgtE_N  47 ealsdeelaelleeldsDdaadll 70 
                 ++ ++ee ++++ee+ sD+  +l+
  EPX74631.1 401 ATCTEEEKEAVFEEIVSDNCLQLM 424
                 445555666666666666655553 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.00085
                 HHHHS-HHHHHHHHCTS-CCCCCHHHHCS-HHHHHHHHCCS-HHHHHHHHCCC CS
      MgtE_N  21 llrllpkeeaaevleeldedlqeeliealsdeelaelleeldsDdaadlleel 73 
                  +++++ e+++e+++eld+++ e + ++  ++ +++ +e +ds+++  +++ l
  EPX74631.1 472 AIEHISAEQQIEIISELDSHVLECVCDQNGNHVIQKSIECIDSERLDFIFDAL 524
                 44555555555555555555555555555555555555555555444334333 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.023
                 HHHHHHHCCS-HHHHHHHHCCCHHHHHHHHH CS
      MgtE_N  52 eelaelleeldsDdaadlleelpeekveell 82 
                   +++ +++++ Dd+a +++    ekv+++ 
  EPX74631.1 610 NVVERCISYISEDDRAYIIQKTLTEKVDNVS 640
                 5567778888888888888888888887653 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (715 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       618  (0.0344693); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.33s 00:00:00.94 Elapsed: 00:00:00.50
# Mc/sec: 4295.45
//
Query:       EPX74632.1  [L=117]
Description: hypothetical protein SOCG_02115 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.044   13.5   0.0      0.062   13.0   0.0    1.3  1  Choline_kin_N  Choline kinase N terminus


Domain annotation for each model (and alignments):
>> Choline_kin_N  Choline kinase N terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   3.5e-06     0.062      24      40 ..      54      70 ..      29      79 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 3.5e-06
  Choline_kin_N 24 dyFKeeilrLlhtLalk 40
                   d+FK ++l+++h+L ++
     EPX74632.1 54 DVFKVDVLEIVHSLEIA 70
                   56************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       436  (0.0243181); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 877.74
//
Query:       EPX74633.1  [L=90]
Description: Tim9-Tim10 complex subunit Tim10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.5e-20   71.9   1.5    2.9e-20   71.7   1.5    1.1  1  zf-Tim10_DDP  Tim10/DDP family zinc finger


Domain annotation for each model (and alignments):
>> zf-Tim10_DDP  Tim10/DDP family zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.7   1.5   1.6e-24   2.9e-20       2      63 ..      18      80 ..      17      81 .. 0.94

  Alignments for each domain:
  == domain 1  score: 71.7 bits;  conditional E-value: 1.6e-24
  zf-Tim10_DDP  2 qleqeqqvanaqelvnkltekCfkkCigk.ypgssLdsseesCldnCvdryldvsnlvskrlq 63
                  + ++eq+v+   e++n+++++C+kkCi + y++++L+++e++C+d+Cv++y+++s++++++++
    EPX74633.1 18 IAMAEQEVELSVEIFNRMVSSCHKKCIATpYKEAELTKGESVCIDRCVAKYFESSKVLGEHMK 80
                  679************************5559****************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       506  (0.0282224); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.26s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 672.37
//
Query:       EPX74634.1  [L=117]
Description: hypothetical protein SOCG_02117 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00017   21.9   0.1    0.00021   21.5   0.1    1.2  1  DUF5308   Family of unknown function (DUF5308)


Domain annotation for each model (and alignments):
>> DUF5308  Family of unknown function (DUF5308)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.1   1.2e-08   0.00021      22      75 ..      34      86 ..      18     115 .. 0.69

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 1.2e-08
     DUF5308 22 qaqleaLtsLtstalsaheaasrlgLGapqrimVetessgpvvlqsyldpaeaa 75
                 +  ++L +Lt + l+a+e  ++l+ G+  +i+    s+g+ vlq+  ++++  
  EPX74634.1 34 VSDKSTLVQLTDACLHAQELTKHLNFGKTVSITNH-YSRGSCVLQTAREKKDGS 86
                567789*************************9855.557778888877775553 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       518  (0.0288917); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.43
# Mc/sec: 809.91
//
Query:       EPX74635.1  [L=117]
Description: Ino80 complex subunit Ies6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.5e-18   64.4   1.8    8.3e-17   60.6   1.0    2.3  2  YL1_C     YL1 nuclear protein C-terminal domain


Domain annotation for each model (and alignments):
>> YL1_C  YL1 nuclear protein C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    2.3   0.0     0.008   1.4e+02      16      25 ..      48      57 ..      47      57 .. 0.94
   2 !   60.6   1.0   4.7e-21   8.3e-17       1      29 []      67      95 ..      67      95 .. 0.97

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.008
       YL1_C 16 TgLpYanvea 25
                T+L Y+++ea
  EPX74635.1 48 TKLSYSSIEA 57
                9*******98 PP

  == domain 2  score: 60.6 bits;  conditional E-value: 4.7e-21
       YL1_C  1 yCdITGlpAkYrDPkTgLpYanveaykvI 29
                yCdITGlpA+Y+DPkT+L+Y+n+e+y  I
  EPX74635.1 67 YCDITGLPAPYTDPKTRLRYHNKEIYSLI 95
                9*************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       304  (0.0169558); expected 358.6 (0.02)
Passed bias filter:                      258  (0.0143901); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.23s 00:00:00.60 Elapsed: 00:00:00.39
# Mc/sec: 909.11
//
Query:       EPX74636.1  [L=298]
Description: nuclear HMG-like acidic protein Mak16 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-37  129.0   1.5      2e-37  128.5   0.4    1.9  2  Ribosomal_L28e  Ribosomal L28e protein family
    5.1e-27   94.4  14.3    5.1e-27   94.4  14.3    2.4  2  Mak16           Mak16 protein C-terminal region
    0.00021   20.8  15.0    0.00027   20.4  15.0    1.2  1  BUD22           BUD22
     0.0096   15.7   1.5      0.015   15.0   1.5    1.4  1  PYC_OADA        Conserved carboxylase domain
  ------ inclusion threshold ------
       0.26   12.0   0.3       0.26   12.0   0.3    2.8  3  DUF2462         Protein of unknown function (DUF2462)
        1.9    7.1  11.4        2.5    6.8  11.4    1.1  1  SAPS            SIT4 phosphatase-associated protein


Domain annotation for each model (and alignments):
>> Ribosomal_L28e  Ribosomal L28e protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.5   0.4   6.6e-41     2e-37       1     115 []       6     118 ..       6     118 .. 0.96
   2 ?   -2.0   0.0       1.9   5.8e+03      66      83 ..     144     161 ..     131     191 .. 0.58

  Alignments for each domain:
  == domain 1  score: 128.5 bits;  conditional E-value: 6.6e-41
  Ribosomal_L28e   1 LiWelvrnnn..sFlvktrtsnkqtFsrepyNltglhsrkysglanskavtVreekkgvvlvtkkkerahkpakawekvklsknsrkalkqiakl 93 
                     +iW+++  ++  s+ +k   ++  +F+r++yN+tgl++r++++lans+++tVre++++++l++k++erah+pak+w+++klskn++kal+qi+++
      EPX74636.1   6 VIWQVI-GHEfcSYRIK---GEALNFCRNEYNVTGLCNRQSCPLANSRYATVREDNGKLYLYMKTIERAHSPAKLWQRIKLSKNYTKALEQINQN 96 
                     79****.7777999999...6789*********************************************************************** PP

  Ribosomal_L28e  94 lkky.rpdlrkaalaRlskitqs 115
                     l  y +   ++++++Rl+++tq+
      EPX74636.1  97 LL-YwPGRQIHRCKQRLTRLTQY 118
                     *8.66****************96 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 1.9
  Ribosomal_L28e  66 rahkpakawekvklskns 83 
                     +a + +ka+ ++kl++n 
      EPX74636.1 144 EATRERKALVAAKLERNI 161
                     333444555555555332 PP

>> Mak16  Mak16 protein C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.4  14.3   1.7e-30   5.1e-27       1     100 []     137     230 ..     137     230 .. 0.81
   2 ?    1.3   5.6      0.17   5.2e+02      63      89 ..     241     268 ..     231     287 .. 0.50

  Alignments for each domain:
  == domain 1  score: 94.4 bits;  conditional E-value: 1.7e-30
       Mak16   1 kkKverRekrReeKAlaAAklekaIekeLleRLksgaYgd.iynveekafkkvlekeeeeeeeeeeeeeeeeeeeeeeeeegeveyve.dee.eeeele 96 
                 k+K+++Re++Re+KAl+AAkle++Ie+eL+eRLksg+Ygd ++nv+e++++kvl+++e+     +e +e+e+      +e++eveyv+ +e+ +eee++
  EPX74636.1 137 KPKQKHREATRERKALVAAKLERNIERELVERLKSGVYGDqPLNVNEEIWQKVLSAREG---LVDEAKEQED------QEDAEVEYVDeEEDeDEEEIS 226
                 68****************************************************76642...2222222222......2236899**944435999999 PP

       Mak16  97 dled 100
                 dled
  EPX74636.1 227 DLED 230
                 9998 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.17
       Mak16  63 eeeeeeeeeeeeeeeeee.geveyvede 89 
                  ++e++e+ee+++ee+ + ++++ +ed 
  EPX74636.1 241 ATSESDEDEESSDEEDATsKKRKSTEDR 268
                 2222222222222222223555555543 PP

>> BUD22  BUD22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4  15.0   9.2e-08   0.00027     141     263 ..     138     272 ..      63     296 .. 0.54

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 9.2e-08
       BUD22 141 kkkkeeekkkkkkkkkkkkkkeeeeeeesdkeeesedsed............eekeeseddeeeeeededdedaeedeedeeaeerelaqydg.llasd 226
                  k+k +e+ +++k+  ++k +++ e+e ++  ++   +++             +++e   de +e+ed++d++ e  +e+e+++e+e++++++ l+++ 
  EPX74636.1 138 PKQKHREATRERKALVAAKLERNIERELVERLKSGVYGDQplnvneeiwqkvLSAREGLVDEAKEQEDQEDAEVEYVDEEEDEDEEEISDLEDwLADQG 236
                 233333333333333333333333334444444444444466666666666645566666666666666666677777888999999999999555544 PP

       BUD22 227 dededeyneetdeesseesdssdssesasesesesse 263
                 +e++  +++++deess+e+d  ++ + +s ++++ss+
  EPX74636.1 237 SEESATSESDEDEESSDEEDATSK-KRKSTEDRKSSK 272
                 444441111122222211111111.111111111111 PP

>> PYC_OADA  Conserved carboxylase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   1.5   5.1e-06     0.015      76     143 ..     157     223 ..     140     284 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 5.1e-06
                 TTSS--HHHHH.HHTTSS---SS---HHHHHHHHT.-----S-GGGG---.-HHHHHHHTTTTSSSHHH CS
    PYC_OADA  76 rykdipdsvvd.llkGelGkppggfpeelvkkvlkgeepitsrpadslepedleklrkeleekakteed 143
                  +++i  ++v+ l  G +G  p +++ee+++kvl ++e +  +++++ e+++ +++ + ++e+ +++e+
  EPX74636.1 157 LERNIERELVErLKSGVYGDQPLNVNEEIWQKVLSAREGLVDEAKEQ-EDQE-DAEVEYVDEEEDEDEE 223
                 666677666551556*******************9777743333333.3322.2333333333333322 PP

>> DUF2462  Protein of unknown function (DUF2462)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.1      0.64   1.9e+03      37      53 ..      75      91 ..      59      98 .. 0.77
   2 ?   12.0   0.3   8.9e-05      0.26      27      65 ..     132     170 ..     113     180 .. 0.86
   3 ?   -0.1   0.1      0.54   1.6e+03      34      45 ..     260     271 ..     237     285 .. 0.61

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.64
     DUF2462 37 klvkqqklkkklsagln 53
                kl +  kl k+++++l 
  EPX74636.1 75 KLWQRIKLSKNYTKALE 91
                57777889999999886 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 8.9e-05
     DUF2462  27 garviaPKkaklvkqqklkkklsaglnkktEkelasrAg 65 
                    +i+PK+++   +++ k  + a+l  ++E+el++r +
  EPX74636.1 132 TLIPIKPKQKHREATRERKALVAAKLERNIERELVERLK 170
                 5568*******************************9965 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.54
     DUF2462  34 Kkaklvkqqklk 45 
                 Kk k  +++k  
  EPX74636.1 260 KKRKSTEDRKSS 271
                 222222222222 PP

>> SAPS  SIT4 phosphatase-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8  11.4   0.00084       2.5     222     344 ..     112     274 ..     106     294 .. 0.40

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.00084
        SAPS 222 iveLiaeLLhcsnmallnekkgeeivkerDevrerlleel.........tseeealedvs....................................dea 275
                  ++L   L++ +  al ++ +   ++k + + re  +e++         +         +                                    dea
  EPX74636.1 112 LTRLTQYLMKARRLALKHQ-PTLIPIKPKQKHREATRERKalvaaklerN---------IerelverlksgvygdqplnvneeiwqkvlsareglvDEA 200
                 5566666666666665555.555555555555555555553333333330.........2222233333333333344444444444444433333222 PP

        SAPS 276 skeesaesedltdkdedvsleesksakd.........enkesdesesdtaeesseededdasseesalaeeteeklrk 344
                 +++e++e+++++  de+ +++e+    +         ++ ++++++s+++e+++++de+da+s++   +e+++++ r 
  EPX74636.1 201 KEQEDQEDAEVEYVDEEEDEDEE----EisdledwlaDQGSEESATSESDEDEESSDEEDATSKKRKSTEDRKSSKRR 274
                 22222222222222222222211....133334455433333333333333333344444444444444444444333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (298 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2013  (0.112276); expected 358.6 (0.02)
Passed bias filter:                      611  (0.0340789); expected 358.6 (0.02)
Passed Vit filter:                       107  (0.00596798); expected 17.9 (0.001)
Passed Fwd filter:                        22  (0.00122706); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.68u 0.30s 00:00:00.98 Elapsed: 00:00:00.45
# Mc/sec: 2011.26
//
Query:       EPX74637.1  [L=484]
Description: GTPase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-45  156.3   1.2    1.6e-45  155.9   1.2    1.2  1  MnmE_helical     MnmE helical domain
    3.5e-38  130.5   0.0    7.3e-38  129.4   0.0    1.6  1  TrmE_N           GTP-binding protein TrmE N-terminus
    1.2e-19   70.4   0.1    3.7e-19   68.9   0.1    1.8  1  MMR_HSR1         50S ribosome-binding GTPase
    1.1e-09   38.0   0.2    1.9e-09   37.2   0.2    1.3  1  FeoB_N           Ferrous iron transport protein B
    3.2e-06   27.3   0.1    0.00012   22.2   0.0    2.9  3  Dynamin_N        Dynamin family
    8.5e-05   22.5   0.1       0.18   11.7   0.0    2.5  2  RsgA_GTPase      RsgA GTPase
     0.0016   18.2   0.0      0.052   13.3   0.0    2.4  2  AAA_24           AAA domain
     0.0076   16.8   0.4      0.061   13.8   0.2    2.5  2  ABC_tran         ABC transporter
       0.01   15.3   0.2        2.3    7.6   0.2    2.3  2  Arf              ADP-ribosylation factor family
  ------ inclusion threshold ------
      0.011   16.0   0.0      0.024   14.9   0.0    1.6  1  AAA_28           AAA domain
      0.035   14.6   0.0       0.13   12.9   0.0    2.0  1  AAA_18           AAA domain
      0.081   12.9   0.1        0.2   11.6   0.1    1.6  1  Glyco_hydro_3_C  Glycosyl hydrolase family 3 C-terminal domai
        0.1   12.9   0.1       0.26   11.6   0.1    1.6  1  Alkyl_sulf_C     Alkyl sulfatase C-terminal
       0.11   12.9   0.0        1.1    9.7   0.0    2.5  3  RNA_helicase     RNA helicase
       0.14   12.3   0.1       0.88    9.8   0.0    2.1  2  Roc              Ras of Complex, Roc, domain of DAPkinase
       0.16   11.3   0.0       0.28   10.5   0.0    1.3  1  GCV_T            Aminomethyltransferase folate-binding domain


Domain annotation for each model (and alignments):
>> MnmE_helical  MnmE helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  155.9   1.2   1.4e-48   1.6e-45       1     206 []     133     481 ..     133     481 .. 0.88

  Alignments for each domain:
  == domain 1  score: 155.9 bits;  conditional E-value: 1.4e-48
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  MnmE_helical   1 LtqaEavadlIdAeteaaakaalrqleGelskkikelrekllellaeleaaiDFpe.edleelseeelaekleelkeelekllatakrgellreGik 96 
                   Ltq E++ad IdAet++++ +  +q++G+l++ +  +++kl+e++a+lea+iDF+e +dl++ + e + +++ +l++e+e++l++a+  e+lreGi+
    EPX74637.1 133 LTQLEGLADAIDAETSEQLYSVSQQAHGDLYRLCFGWKNKLVECRALLEATIDFSEeHDLDQKEFEPIFQEILDLTDEMERHLSKARPTEILREGIR 229
                   9*******************************************************5569999999******************************* PP

                   ................................................................................................. RF
  MnmE_helical  97 ................................................................................................. 96 
                                                                                                                    
    EPX74637.1 230 vavvgppnagksslvnylakrkvsivneqpgttrdaietlldihgfpvfltdtagfrkgsdvqeiesigieiakekaekahvvllilpseiwtgksl 326
                   **********************************************************************999999999999999999999999999 PP

                   ...........................xxxxxxx......xxxxxxxx..............xxxxxxxxxxxxxxxxxxx.xx.x...xxx...xx RF
  MnmE_helical  97 ...........................Dllkeke......ekeeeevl..............kiSaktgegieeLeeaike.le.l...eei...ee 138
                                              Dl + ++      +                     ++S+k++ g+e+ ++a+++ ++ +   + +   ++
    EPX74637.1 327 alenqifelvknykaknqqvhvllnktDLVQGASgaatmvR------KylhqaldipishvhEVSIKNEIGLEQALAALASsFRiIshvQ-TennDD 416
                   99999998887777777777777777766666555555441......044445566667777*****************99777555542.134455 PP

                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  MnmE_helical 139 eplltnaRhkealekalealeeakealeaglpldlv..aedLrealeaLgeItGevvtedlLdeIFskFC 206
                   + + +n+R++eal++++++l+     ++ + + d+v  ae+L+ a++++g+ItG+v++e+l+d IFs+FC
    EPX74637.1 417 GGYGWNRRQREALKECIKHLK-----MSLNYASDVVitAEELKLATDEVGRITGAVNVESLFDIIFSRFC 481
                   9********************.....333334565556******************************** PP

>> TrmE_N  GTP-binding protein TrmE N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.4   0.0   6.5e-41   7.3e-38       1     115 []      13     130 ..      13     130 .. 0.96

  Alignments for each domain:
  == domain 1  score: 129.4 bits;  conditional E-value: 6.5e-41
                 -EEEE-S-SSS-SEEEEEEESTTHHHHHHTTEEET--CTEEEEEEEECT..TCEEEEEEEEEEBTTCSTTSSEEEEEEEESSHHHHHHHHHHHHCT... CS
      TrmE_N   1 TIaAlatpagkgaiaiiRvsGpkaleiakklfkkelkprkallgklvdeeekevlDevlvlvfkaprsyTgedvvElhlhGgpavvkavleallka... 96 
                 TI+Al+tpag++a++++R+sGp+a ++++kl+ k +kpr a+l+++ ++++++++D++l+l+f++p s+Tged+vE+hlhGg+a+vk++l+a+ ++   
  EPX74637.1  13 TIYALSTPAGRAALSVVRISGPSASTVLQKLTGKIPKPRLASLQSIKHPTRSQIVDKALILYFQQPASFTGEDIVEFHLHGGKAIVKEALDAIEQTnip 111
                 9*******************************999**********************************************************544666 PP

                 T-EE--CTHHHHHHHHTTS CS
      TrmE_N  97 garlAepGEFtkRaflngk 115
                 ++r+A pGEF++Raf+ngk
  EPX74637.1 112 NLRYALPGEFSERAFYNGK 130
                 78****************8 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.9   0.1   3.3e-22   3.7e-19       1     114 []     229     352 ..     229     352 .. 0.75

  Alignments for each domain:
  == domain 1  score: 68.9 bits;  conditional E-value: 3.3e-22
                 EEEEEESTTSSHHHHHHHHHTS.TEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSS....HHHHHHHHHHHHHHHHCTSEEEEEEETT......TT CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltge.kaivsdkpgtTrdinegrvklkgkeielvDtpGlie....gaseekglgkaflaleeadlillvvdas......ee 88 
                 +va+vG pN+GKS+L+n l ++ ++iv+++pgtTrd +e  ++++g ++ l+Dt+G+ +    ++ e+ g++ a ++ e+a+++ll++ ++        
  EPX74637.1 229 RVAVVGPPNAGKSSLVNYLAKRkVSIVNEQPGTTRDAIETLLDIHGFPVFLTDTAGFRKgsdvQEIESIGIEIAKEKAEKAHVVLLILPSEiwtgksL- 326
                 69*******************9678*******************************533433333444499999999999********9557654321. PP

                 CSHHHHHHHHHHHHH...TTSEEEEEEES CS
    MMR_HSR1  89 klkpldeeleellee...akkplilvlnk 114
                    +l++++ el ++   +++++ ++lnk
  EPX74637.1 327 ---ALENQIFELVKNykaKNQQVHVLLNK 352
                 ...23333333333333366677777776 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.2   0.2   1.7e-12   1.9e-09       2     142 ..     229     382 ..     228     398 .. 0.81

  Alignments for each domain:
  == domain 1  score: 37.2 bits;  conditional E-value: 1.7e-12
                 EEEEEESTTSSHHHHHHHHHTTSEEEEE.STTSSSEEEEEEEEETTEEEEEEE----SSSSSSSHHHHHHHHHHH..CTSSSEEEEEEEGGGH.HHHHH CS
      FeoB_N   2 tvalvGnpnvGkttlfnaltgakqkvgN.wpGvtvekkegklklkgkeveivDlPGiYslsayseeekvardfll..eeepdvvvnvvdatnl.ernLy 96 
                 +va+vG pn+Gk++l+n l++ k ++ N  pG+t +  e+ l+++g  v ++D  G  + s++ e e++  ++     e+++vv+ ++ ++    ++L 
  EPX74637.1 229 RVAVVGPPNAGKSSLVNYLAKRKVSIVNeQPGTTRDAIETLLDIHGFPVFLTDTAGFRKGSDVQEIESIGIEIAKekAEKAHVVLLILPSEIWtGKSLA 327
                 79*********************9887758**************************************99999874356788899999887652699** PP

                 HHHHHHHT.......TSSEEEEEETHHHHHHTT..EEE-HHHHHHHHTS-EEEEB CS
      FeoB_N  97 Ltlqllel.......gvpvvlalnmideaekkg..ieidlkkLsekLgvpvvkts 142
                 L  q++el       +++v + ln++d ++ +    ++  k L+++L++p+ ++ 
  EPX74637.1 328 LENQIFELvknykakNQQVHVLLNKTDLVQGASgaATMVRKYLHQALDIPISHVH 382
                 *****9984444333457899*******99764236777899*******986554 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       3.6     4e+03      57      80 ..     128     151 ..     115     218 .. 0.58
   2 !   22.2   0.0   1.1e-07   0.00012       1      34 [.     230     263 ..     230     272 .. 0.91
   3 ?    1.9   0.0      0.19   2.1e+02      99     139 ..     273     319 ..     265     353 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 3.6
                 EET-EB--CHHHHHHHHHHHHHHH CS
   Dynamin_N  57 ekekkledfsevreeieketekia 80 
                 +++++l++++ ++++i++et++  
  EPX74637.1 128 NGKTDLTQLEGLADAIDAETSEQL 151
                 556666666666666666666544 PP

  == domain 2  score: 22.2 bits;  conditional E-value: 1.1e-07
                 EEEEEBTTTTHHHHHHHHHTS--S---SSS---S CS
   Dynamin_N   1 iavvGsqSsGKSSvlnaLlgedilprgpnptTrr 34 
                 +avvG  ++GKSS++n L ++++  + ++p T r
  EPX74637.1 230 VAVVGPPNAGKSSLVNYLAKRKVSIVNEQPGTTR 263
                 89***********************999987754 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.19
                 TS-SEEEEE---B-SSSGTTS......HHHHHHHSTTEEEEEEEETT CS
   Dynamin_N  99 lvkgltlvDlPGldsvnkrdq......elvkeyikkadiilavtsan 139
                 +   + l D+ G+ +  + ++      e++ke ++ka+++l++++++
  EPX74637.1 273 HGFPVFLTDTAGFRKGSDVQEiesigiEIAKEKAEKAHVVLLILPSE 319
                 55568899*******98888899******************999876 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.0   0.00016      0.18      97     134 ..     224     259 ..     183     289 .. 0.65
   2 !    8.1   0.1     0.002       2.2      38      98 ..     335     400 ..     324     407 .. 0.61

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00016
                  CTT.SEEEEECSTTSSHHHHHHHHCTT-----S------ CS
  RsgA_GTPase  97 lkd.ktsvlvGqSGvGKStLinallpelelktgevsekl 134
                  l++   +++vG+  +GKS+L+n l+ ++   ++ v e+ 
   EPX74637.1 224 LREgIRVAVVGPPNAGKSSLVNYLAKRK---VSIVNEQP 259
                  5552456799**************9984...44444443 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.002
                  HHHHHHHTT-EEEEEEE-GGG--HHHHHHHHHHHH..HHTTSE...EEE--TTTHTTHHHHHHHCT CS
  RsgA_GTPase  38 fLvlaeekgiepvivlnKiDlleeeeeleelkeel..ealgye...vllvsaktkegleelkellk 98 
                  ++  +++k+ +++++lnK+Dl++ ++ + ++  ++  +al+++   v  vs k++ gle+  ++l+
   EPX74637.1 335 LVKNYKAKNQQVHVLLNKTDLVQGASGAATMVRKYlhQALDIPishVHEVSIKNEIGLEQALAALA 400
                  5556788999*************9994444444431123333311144566666666665555555 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.0   4.7e-05     0.052       2      59 ..     227     285 ..     226     316 .. 0.77
   2 ?    2.2   0.0      0.11   1.2e+02     123     172 ..     401     452 ..     391     472 .. 0.59

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 4.7e-05
      AAA_24   2 klkiliyGpsgiGKTtlakelgpkplfidtek.Glksldadkfpdieswedfldevvel 59 
                 +++++++Gp+ +GK++l++ l ++ + i  e+ G+ +     + di++++ fl + + +
  EPX74637.1 227 GIRVAVVGPPNAGKSSLVNYLAKRKVSIVNEQpGTTRDAIETLLDIHGFPVFLTDTAGF 285
                 679******************555555555555**999999999999999998877665 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.11
      AAA_24 123 knvifiahektrkdedpege.akytrlepklgkkt...anelkeevDlvlranl 172
                   + +i+h +t++++d+  +     r +  l++     +  l++ +D+v++a+ 
  EPX74637.1 401 SSFRIISHVQTENNDDGGYGwN--RRQREALKECIkhlKMSLNYASDVVITAEE 452
                 5566788888888888755531..222222222213336667777777777664 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0       1.2   1.3e+03      47      80 ..      56     120 ..      28     183 .. 0.52
   2 !   13.8   0.2   5.4e-05     0.061       8      36 ..     224     252 ..     221     374 .. 0.66

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 1.2
                 CEGGG.B-HHHCCHCEEEE-SS--S-TTSBHHHH..............................H CS
                 xxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxx..............................x RF
    ABC_tran  47 kdlke.qeleslrkeigvlpqepqlfpeltvren..............................e 80 
                 +++k+ ++ ++++k +  ++q+p  f +  + e                               e
  EPX74637.1  56 QSIKHpTRSQIVDKALILYFQQPASFTGEDIVEFhlhggkaivkealdaieqtnipnlryalpgE 120
                 44455455677777777778887777777776666776654444444444444444444444441 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 5.4e-05
                 EETTSEEEEEESTTSSHHHHHHHHTTSS- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   8 lkegekvaivGenGaGKStLlkllagllk 36 
                 l+eg +va+vG+  aGKS+L++ la+   
  EPX74637.1 224 LREGIRVAVVGPPNAGKSSLVNYLAKRKV 252
                 67899*******************98754 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0     0.011        12      13      44 ..     226     259 ..     215     285 .. 0.77
   2 !    7.6   0.2    0.0021       2.3     102     173 ..     330     401 ..     325     403 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.011
                 TEEEEEEEESTTSSHHHHHHHHHHSSC..EECSS CS
         Arf  13 kelrilllGLDnaGKtTilkklkleel..vttvP 44 
                   +r+ ++G  naGK+ +++ l + ++  v+ +P
  EPX74637.1 226 EGIRVAVVGPPNAGKSSLVNYLAKRKVsiVNEQP 259
                 56899*****************988761145555 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0021
                 HHHHHHCTSGCCTTSEEEEEEE-TTSTTSS-HHHHHHHTTGGGSSSSSSEEEEEEBTTTTBTHHHHHHHHHH CS
         Arf 102 eeLkalleeeelkevallvlaNKqDlpealseeelrellgleelkgkrkleiqkcsavkgeglkeglewlse 173
                 +++ +l+++ + k+ ++ vl NK Dl + +s +       l++       ++ ++s+ +  gl+++l  l++
  EPX74637.1 330 NQIFELVKNYKAKNQQVHVLLNKTDLVQGASGAATMVRKYLHQALDIPISHVHEVSIKNEIGLEQALAALAS 401
                 567789999999999*************99999888888888855244457888999999999999988865 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.0   2.2e-05     0.024       1      29 [.     229     257 ..     229     279 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 2.2e-05
      AAA_28   1 kivitGgestGKTtlleaLaargypvvpE 29 
                 +++++G++ +GK++l++ La+r++++v E
  EPX74637.1 229 RVAVVGPPNAGKSSLVNYLAKRKVSIVNE 257
                 799**********************9966 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   0.00011      0.13       1      22 [.     230     251 ..     230     281 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.00011
      AAA_18   1 IlltGtpGvGKttlakeLskrl 22 
                 +++ G+p +GK++l ++L+kr 
  EPX74637.1 230 VAVVGPPNAGKSSLVNYLAKRK 251
                 689*****************95 PP

>> Glyco_hydro_3_C  Glycosyl hydrolase family 3 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   0.00018       0.2      15     125 ..     226     356 ..     218     370 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00018
                      -STEEEEEESGGGSSS-SS-BSSS----S---....HHHHHHHHHHH..........................-HHHHHHHHHHHTSEEEEEEE CS
                      xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxx........................xxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_3_C  15 kklkkiaviGpnadetlklGggsgtvtvsylv....splegirerles........................eegideaveaakeaDvavvvvg 80 
                      + + ++av+Gp   ++  l ++ ++ +vs +     +  ++i++ l +                        + gi+ a+e+a++a v+++++ 
       EPX74637.1 226 EGI-RVAVVGPPNAGKSSLVNYLAKRKVSIVNeqpgTTRDAIETLL-DihgfpvfltdtagfrkgsdvqeieSIGIEIAKEKAEKAHVVLLILP 317
                      444.9*****777768888999988877666533335555555555.26**********************9999************9999987 PP

                      ES...SB-TTSCSGHHSSTTHHHHHHHHHHTTSSEEEEEEESSGG CS
                      xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_3_C  81 edpeiegEgvDrtdlalpeaqdelikavaaanknvvvvlqsggpv 125
                      ++       +  ++lal ++  el+k+ +a+n++v v+l++   v
       EPX74637.1 318 SE------IWTGKSLALENQIFELVKNYKAKNQQVHVLLNKTDLV 356
                      76......777799********************99999887655 PP

>> Alkyl_sulf_C  Alkyl sulfatase C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   0.00023      0.26      18      91 ..     295     367 ..     289     377 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00023
                   HHHHHHB-HHHHTT-EEEEEEEETTTTEEEEEEEETTEEEE.ECT---TTSSEEEEE-HHHHHHHHTTSS-HHH CS
  Alkyl_sulf_C  18 DylAirvdgpkaadkdltinlvvtDvdekyllrlsngvLthtrkaaqaddadltvtltreqLvalllgkatlgk 91 
                   ++++i + ++ka++ ++++ +  +++ ++  l l+n ++    k+ +a++ ++ v l++++Lv+ ++g+at+  
    EPX74637.1 295 ESIGIEIAKEKAEKAHVVLLILPSEIWTGKSLALENQIFEL-VKNYKAKNQQVHVLLNKTDLVQGASGAATMVR 367
                   689****************999999999*************.889999******************99998765 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       2.6   2.9e+03      10      38 ..     129     155 ..     127     164 .. 0.78
   2 ?    9.7   0.0   0.00098       1.1       2      21 ..     231     250 ..     230     266 .. 0.84
   3 ?   -1.7   0.0       3.3   3.7e+03       9      41 ..     322     353 ..     320     372 .. 0.67

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 2.6
  RNA_helicase  10 GKStlakeLakallkklklkkkdsvysrn 38 
                   GK+ l++   + l+++++ ++++++ys +
    EPX74637.1 129 GKTDLTQL--EGLADAIDAETSEQLYSVS 155
                   99999999..9999999999999999843 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00098
  RNA_helicase   2 wlyGpsgeGKStlakeLaka 21 
                    ++Gp++ GKS+l+++Lak+
    EPX74637.1 231 AVVGPPNAGKSSLVNYLAKR 250
                   689*************9987 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 3.3
  RNA_helicase   9 eGKStlakeLakallkklklkkkdsvysrnped 41 
                   +GKS++ ++ + +l k++k k+ ++v +  +++
    EPX74637.1 322 TGKSLALENQIFELVKNYKAKN-QQVHVLLNKT 353
                   5888888887888887775555.5555533344 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0   0.00079      0.88       1      25 [.     229     253 ..     229     284 .. 0.85
   2 ?   -0.4   0.1       1.2   1.3e+03      97     119 ..     331     354 ..     300     355 .. 0.57

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00079
                 EEEEESSTTSSHHHHHHCHCT-CCC CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfs 25 
                 +v +vG  ++GK+sl++ + ++k+s
  EPX74637.1 229 RVAVVGPPNAGKSSLVNYLAKRKVS 253
                 5889***************999886 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 1.2
                 HHHHHHHHH.CSSS-EEEEEE-TT CS
         Roc  97 eWlkelkkv.agkspvilvgnkiD 119
                 + ++ +k++ a++++v ++ nk+D
  EPX74637.1 331 QIFELVKNYkAKNQQVHVLLNKTD 354
                 344445666345667889999999 PP

>> GCV_T  Aminomethyltransferase folate-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00025      0.28     139     201 ..      25      94 ..      13     111 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00025
       GCV_T 139 elallalqGPkarevlskll....gadlselkffsfaevela...ggkkvlvsRtgytGedGfeiyipae 201
                 +l+++ + GP a  vl+kl+    + +l++l+  ++ +  +    + +  +    ++tGed +e++++  
  EPX74637.1  25 ALSVVRISGPSASTVLQKLTgkipKPRLASLQSIKHPTRSQIvdkALILYFQQPASFTGEDIVEFHLHGG 94 
                 57999***************86544448888888887666553222222333457999999999987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (484 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       739  (0.0412181); expected 358.6 (0.02)
Passed bias filter:                      626  (0.0349155); expected 358.6 (0.02)
Passed Vit filter:                        89  (0.00496402); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.60u 0.26s 00:00:00.86 Elapsed: 00:00:00.41
# Mc/sec: 3538.28
//
Query:       EPX74638.1  [L=654]
Description: PEK protein kinase Hri2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-35  122.7   0.0    6.6e-21   74.9   0.0    2.4  2  Pkinase          Protein kinase domain
    6.7e-15   55.1   0.0      3e-07   30.0   0.0    2.6  2  Pkinase_Tyr      Protein tyrosine kinase
     0.0078   15.0   0.0      0.015   14.1   0.0    1.5  1  Pkinase_fungal   Fungal protein kinase
  ------ inclusion threshold ------
      0.061   13.4   2.9       0.12   12.5   2.9    1.5  1  bZIP_2           Basic region leucine zipper
       0.18   10.8   2.0        7.6    5.4   0.2    2.3  2  Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase
        0.6   10.4   3.1        1.5    9.1   3.1    1.6  1  HALZ             Homeobox associated leucine zipper


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.4   0.0   2.1e-15   6.3e-12       2      71 ..     181     249 ..     180     270 .. 0.90
   2 !   74.9   0.0   2.2e-24   6.6e-21      73     260 ..     369     595 ..     365     599 .. 0.76

  Alignments for each domain:
  == domain 1  score: 45.4 bits;  conditional E-value: 2.1e-15
                 EEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESS CS
     Pkinase   2 ekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekd 71 
                  +l+ lG+G+fG Vy+++++ +g ++A+Kk+    ++    +k++rEik l+kl+hpnivr+y ++ e+ 
  EPX74638.1 181 DELHMLGKGGFGAVYRVRNRVDGAEYAMKKVFPTFQQVPY-TKIFREIKSLAKLDHPNIVRYYASWLENA 249
                 57789**************************999888766.59********************9998754 PP

  == domain 2  score: 74.9 bits;  conditional E-value: 2.2e-24
                 EEEEEE--TTEBHHHHHH........HHSS--HHHHHHHHHHHHHHHHHHH.HTTEE-SS-SGGGEEEET.......................TTEEEE CS
     Pkinase  73 lylvleyveggeladlle........rkgslseeeakkiakqilegleylH.skgiiHrDlKpeNiLide.......................kgelKi 139
                 ly+ ++++  + l+++l           ++++ +   ++++ il+g+ y+H  +++iHrD+Kp+Ni++ +                       +   K+
  EPX74638.1 369 LYIQMQLCTDD-LESYLFrrnskisfPLSIVDTRIHIQLFRAILHGVVYIHeVAHLIHRDIKPSNIFLAKsltfdrgsvplynyrdnannglsNYTPKL 466
                 68888888855.444444332222222222334456699************6678**************779999999999999987765554444*** PP

                 -SGTTSEESSSSCS................BCTTTSCGGGS-HHHH......TTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHH CS
     Pkinase 140 tDFGlakelesssk................ltsfvgtseYlAPEvl......keneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqleki 216
                 +DFGl+   e ++                 +t+ vgt  Y APE+l      ++ ++s+++D+++lG++l+ell+   pf    ++    ++l+q    
  EPX74638.1 467 GDFGLVIDNEGKTLnsvsfskdlqhvsqvnATQHVGTMSYAAPELLdalashSNVPVSEAIDIFALGIVLFELLY---PFDTAMERALRLRDLRQ---- 558
                 ******998888778999****************************99997656677****************75...88855555555555555.... PP

                 HHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHT CS
     Pkinase 217 lkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellq 260
                   +l       +e  e      +l+ ++ +kdp+kR+  +++l+
  EPX74638.1 559 -GVL------PDEFIEKHGCESSLILWMTAKDPSKRPMLSDVLK 595
                 .222......2222222333457999999999999999988887 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0   2.5e-08   7.6e-05       5      73 ..     184     248 ..     180     257 .. 0.90
   2 !   30.0   0.0     1e-10     3e-07      81     256 ..     374     594 ..     356     596 .. 0.72

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 2.5e-08
                  EEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESS CS
  Pkinase_Tyr   5 kklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctke 73 
                  + lG+G fG V++ + +     +  + a+K++  + ++   +++++e+k + kl+hpniv++++  +++
   EPX74638.1 184 HMLGKGGFGAVYRVRNR----VDGAEYAMKKVFPTFQQVPYTKIFREIKSLAKLDHPNIVRYYASWLEN 248
                  68***********9999....888999***********************************9987754 PP

  == domain 2  score: 30.0 bits;  conditional E-value: 1e-10
                  E--TTEBHHHHHHHT......CTTTSBHHHHHHHHHHHHHHHHHHHHT.TEEEST-SGGGEEEEE.......................TTEEEE-STT CS
  Pkinase_Tyr  81 eyvkgGdLlkfLrkk......ekekltlkdllsfalqvAkGmeyLesk.klvHrdlaarNvLlse.......................nkvvkisDfG 148
                  +++   dL+++L ++        + ++++  +++   + +G+ y+++  +l+Hrd+   N++l++                       n + k++DfG
   EPX74638.1 374 QLC-TDDLESYLFRRnskisfPLSIVDTRIHIQLFRAILHGVVYIHEVaHLIHRDIKPSNIFLAKsltfdrgsvplynyrdnannglsNYTPKLGDFG 470
                  444.458888887774555554555667778999999********986279************************************999******** PP

                  THEETTTSSEE.............EETTSSTSGGGGS-HHHHHHSE......EEHHHHHHHHHHHHHHHHTTSSGTTTTS.HHHHHHHHHHTTEES-B CS
  Pkinase_Tyr 149 Lardiekddey.............vkkeeaklpvkWmapEslkekk......ftsksDvWsfGvllwEiftlgespypgl.kneevleklkegkrlek 226
                  L  d e +                v+++++   + + apE l++        ++++ D+++ G++l+E++   ++ +++  + +++ + +  ++ + +
   EPX74638.1 471 LVIDNEGKTLNsvsfskdlqhvsqVNATQHVGTMSYAAPELLDALAshsnvpVSEAIDIFALGIVLFELLYPFDTAMERAlRLRDLRQGVLPDEFI-E 567
                  *98874333222233333334333455666678999*****999888889999*****************95555444442333333333333333.2 PP

                  BTTSBHHHHHHHHHHT-SSGGGS--HHHHH CS
  Pkinase_Tyr 227 pekcpeelyelmkkcweedpeeRptfselv 256
                   + c+++l   m    ++dp++Rp +s+++
   EPX74638.1 568 KHGCESSLILWM---TAKDPSKRPMLSDVL 594
                  334555544444...578888888888775 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.0   4.9e-06     0.015     160     392 ..     194     519 ..     184     579 .. 0.62

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 4.9e-06
  Pkinase_fungal 160 cwrarkegergkeyvvKdsWrdaerksEaelLkkaeergv...egvarlvahedveekdddi.aeiRkgldvtkae................... 231
                     ++r+r++ +   ey +K +    ++ + +++ +++++ ++    +++r++a+   e +  ++  ++R+    +++                    
      EPX74638.1 194 VYRVRNRVDG-AEYAMKKVFPTFQQVPYTKIFREIKSLAKldhPNIVRYYASWL-E-NASEVvPNVRNPSVSSTKMiqglesldisrddsitvan 285
                     6777775444.6777777777777777777777775544444456666665543.3.33344467776555444422355544444444442222 PP

  Pkinase_fungal 232 kfrskrkvvsssssqe....................................lsskaevklkksesskkvekrsvdssvstskrsr......... 281
                     +              e                                    +           es                             
      EPX74638.1 286 N--------------EdsvysddrsnndsiifaadisgqsdniyfqkaspeaS-----------ES-------------------Gnsshgedse 336
                     0..............02222223233444444444444334333222111111...........11...................0111111111 PP

  Pkinase_fungal 282 ...........................................lenrvhrrlvispvGkpiekaespkellealrD.aIkghrsLflkagiLHrD 332
                                                                le  ++rr    ++  +i + +   +l++a+ + ++ +h+       ++HrD
      EPX74638.1 337 nkygssydeiienpgntsalyastiaplncfvlyiqmqlctddLESYLFRRNSKISFPLSIVDTRIHIQLFRAILHgVVYIHEVA----HLIHRD 427
                     1222233334444555556777777888888888888888777777777777777777777777777888887654155666555....5***** PP

  Pkinase_fungal 333 iSenNilit................dskke................gerkglLiDLDlakelsddssesgarertGTleFmaievlkgee.Hs 392
                     i   Ni +                 d++++                +++   L  + + k+l+++s+  +a +++GT+ + a e+l +   Hs
      EPX74638.1 428 IKPSNIFLAksltfdrgsvplynyrDNANNglsnytpklgdfglviDNEGKTLNSVSFSKDLQHVSQV-NATQHVGTMSYAAPELLDALAsHS 519
                     *********99999999999999884433356556666677777778888888888899999875544.5699************99744487 PP

>> bZIP_2  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   2.9     4e-05      0.12      32      53 ..     632     653 ..     627     654 .] 0.91

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 4e-05
                 HHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_2  32 ervkeLeeeNaqLrqkveqLek 53 
                 +++k+L+eeNa+Lr+++e+L+k
  EPX74638.1 632 QENKQLREENARLRNELEELKK 653
                 899*****************97 PP

>> Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.2    0.0026       7.6      65     115 ..     162     212 ..     154     250 .. 0.75
   2 ?    4.8   0.1    0.0038        11     279     315 ..     403     438 ..     365     470 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0026
  Pox_ser-thr_kin  65 dYinpsyfqlkdkrfypanddlYhistGGYGivfriekyvvkfvfepnkky 115
                      ++   s+ + k++r++   d+l+ +  GG+G v+r+ + v    +  +k +
       EPX74638.1 162 NFTYYSWLHTKHSRYVNDFDELHMLGKGGFGAVYRVRNRVDGAEYAMKKVF 212
                      566679999**************************9765544444444444 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.0038
  Pox_ser-thr_kin 279 fifLqiaLLyikiyelpdcenflhvDlkPdniLifds 315
                      +i L  a+L+  +y   +    +h D+kP ni++ +s
       EPX74638.1 403 HIQLFRAILHGVVYIH-EVAHLIHRDIKPSNIFLAKS 438
                      5555556776666655.47889**********98665 PP

>> HALZ  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   3.1   0.00049       1.5      20      40 ..     633     653 ..     630     654 .] 0.90

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00049
        HALZ  20 dydsLkkenekLkaelqeLke 40 
                 ++ +L++en +L++el+eLk+
  EPX74638.1 633 ENKQLREENARLRNELEELKK 653
                 5779***************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (654 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       757  (0.0422221); expected 358.6 (0.02)
Passed bias filter:                      606  (0.0338); expected 358.6 (0.02)
Passed Vit filter:                        90  (0.0050198); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.69u 0.28s 00:00:00.97 Elapsed: 00:00:00.43
# Mc/sec: 4588.17
//
Query:       EPX74639.1  [L=230]
Description: glutamine aminotransferase subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      3e-44  151.1   0.0    3.5e-44  150.9   0.0    1.0  1  SNO            SNO glutamine amidotransferase family
    1.6e-07   31.2   0.0    2.6e-07   30.5   0.0    1.3  1  GATase_3       CobB/CobQ-like glutamine amidotransferase doma
    5.1e-06   26.4   0.0    1.2e-05   25.2   0.0    1.5  1  GATase         Glutamine amidotransferase class-I
    0.00073   19.4   0.0      0.014   15.2   0.0    2.3  1  Peptidase_C26  Peptidase C26
     0.0074   16.0   0.0     0.0088   15.7   0.0    1.2  1  Peptidase_S51  Peptidase family S51
  ------ inclusion threshold ------
      0.059   13.2   0.0       0.13   12.0   0.0    1.5  2  DJ-1_PfpI      DJ-1/PfpI family


Domain annotation for each model (and alignments):
>> SNO  SNO glutamine amidotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.9   0.0   1.2e-47   3.5e-44       1     186 [.      25     224 ..      25     226 .. 0.85

  Alignments for each domain:
  == domain 1  score: 150.9 bits;  conditional E-value: 1.2e-47
                 EESSSSSHHHHHHHHHHTT.SEEEEE-SGGGGCC-SEEEE-SS-HHHHHHHHH.HTT-HHHHHHHHHTT.--EEEETHHHHHHCCEETTB...SS-SS- CS
         SNO   1 vlalqGaveehveaikkcl.aenktvkrkedlaevdaliiPGGestamsklie.rtglyedllefvknsekvvlGtCaGlillskelene...lvktle 94 
                 vlalqGa++eh++ ++    + +  vk+  d +++d+l++PGGest+m++li    +l e+l   v+++  +++GtCaG+illsk+ ++    +   l 
  EPX74639.1  25 VLALQGAFIEHINILNSFEdVFSFPVKTGADCKNIDGLVLPGGESTTMGRLIGiDSDLKENLESLVARG-VPMWGTCAGMILLSKKSHGGkfpDPYLLR 122
                 8************999865255699*************************9973578999999999999.9**************99888465566799 PP

                 -CCEEEETTTT-SCCGEEEEEEEETTTC........SEEEEEESS--EEEEE-.TTTCEEEEECT..TEEEEEE.ETTEEEESS-GGGSTTHCHHHHHH CS
         SNO  95 llkvkvkrnafGrqvdsfekeldfknli........ekftavfiraPvieeilddeavkvlyeld..geivvak.qkkilatsfhPelaeddirvhdyf 182
                  ++++v rn fG q  sf+ ++   ++         e f a+firaP+   i +d + + ++ ++   e+vva  q+ +l+tsfhPel+ dd   h ++
  EPX74639.1 123 AMDIEVTRNYFGPQTMSFTTTIRPTDFMrfettkrmEAFDATFIRAPIASSINSDSVRVLATTTHkdREVVVAVeQGPFLGTSFHPELTVDD-SWHRWW 220
                 9******************999777776666999999***************977665554443333477766669*************996.689999 PP

                 HHHH CS
         SNO 183 veev 186
                 v+e 
  EPX74639.1 221 VNER 224
                 9875 PP

>> GATase_3  CobB/CobQ-like glutamine amidotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.5   0.0   8.6e-11   2.6e-07      16      92 ..      36     110 ..      22     130 .. 0.85

  Alignments for each domain:
  == domain 1  score: 30.5 bits;  conditional E-value: 8.6e-11
    GATase_3  16 ldpLeaepevrvrfvplkdeslgedadlvilpGgkdtiqdlallresgldeaikeaaeaggpvlgiCGGlqmLGeei 92 
                 +++L+  ++v  + v+ ++ + ++ +d ++lpGg++t+    +  +s+l+e++++++++g+p++g C+G+++L+++ 
  EPX74639.1  36 INILNSFEDVFSFPVK-TGADCKN-IDGLVLPGGESTTMGRLIGIDSDLKENLESLVARGVPMWGTCAGMILLSKKS 110
                 6666666666666666.7777855.************************************************9985 PP

>> GATase  Glutamine amidotransferase class-I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.0   3.9e-09   1.2e-05      40     175 ..      56     212 ..      34     223 .. 0.70

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 3.9e-09
                 HHSTSEEEEEEESSCTT......TTTHHHHHHHHCTSTS-EEEETHHHHHHHHHTTT............EEEEEECEEEEEEEEEEEETTT......CG CS
      GATase  40 lknpdgilvsgGpgspg......vegkieaikearenkiPiLGICLGmQllaiefgr............kvvkekekehhggtmrlgddet......al 114
                  kn+dg++++gG  +             e+++ +  +++P+ G C Gm ll +++ +            +++  + +    +tm ++ + +       +
  EPX74639.1  56 CKNIDGLVLPGGESTTMgrligiDSDLKENLESLVARGVPMWGTCAGMILLSKKSHGgkfpdpyllramDIEVTR-NYFGPQTMSFTTTIRptdfmrFE 153
                 589*********9888789866545556667777779***************99988788888888877444333.34444555555422243543322 PP

                 GTTTTSEEEEEEEEEEEEESG...CHHHTTEEEEEEEETTEEEEEEEEETT.TEEEESSBTTSTT CS
      GATase 115 lyglknevierhrHryevnpk...elepaglevtakseddeelmeiiekkn.pfvgvQFHPEsts 175
                 +++  + +++++            ++ ++ ++v+a+++++  ++ ++  ++ pf g+ FHPE t 
  EPX74639.1 154 TTKRMEAFDATFIRA-----PiasSINSDSVRVLATTTHK-DREVVVAVEQgPFLGTSFHPELTV 212
                 222223334444333.....2344799999*****99887.688888888879*********986 PP

>> Peptidase_C26  Peptidase C26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   4.6e-06     0.014      99     216 .]      87     209 ..      49     209 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 4.6e-06
  Peptidase_C26  99 raalergvPilgiCrGlqllnvalGGtlyqdieeqsgltdhreheqsaashavkvekgsllaellg.seeievnslHhqaike......laeelrv 187
                    ++ ++rgvP++g+C G+ ll     G  + d +     +d   +++++  +++++++     +++  +++ +++ +    i+        ++++rv
     EPX74639.1  87 ESLVARGVPMWGTCAGMILLSKKSHGGKFPDPY-LLRAMDIEVTRNYFGPQTMSFTTTIRPTDFMRfETTKRMEAFDATFIRApiassiNSDSVRV 181
                    67789***************9988777777776.47788888888888888888888777777776677778888888888777777777889999 PP

  Peptidase_C26 188 eAvaeDgviEaieseeakafvlgvQwHPE 216
                     A+++    E + + e + ++lg  +HPE
     EPX74639.1 182 LATTTHKDREVVVAVE-QGPFLGTSFHPE 209
                    9999988899988888.679********9 PP

>> Peptidase_S51  Peptidase family S51
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   2.9e-06    0.0088      58     139 ..      28     116 ..       7     175 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 2.9e-06
                    HTT-EEEE--TTTS-HHH....HHH..HHHHSSEEEE--S-HHHHHHHHH.HTTHHHHHHHHHHTT-EEEEETHHHHTTSSB-GGGTTT CS
  Peptidase_S51  58 klglevdeLelskdpeee....iee..klleadviyvgGGntfrLlkllk.etgldkllreavqqglvyiGvSAGaivagesiettsys 139
                     +g+ ++++++ ++ e+     +++    ++ d++++ GG+   + +l+  + +l + l+  v++g+++ G+ AG i  +++ +  ++ 
     EPX74639.1  28 LQGAFIEHINILNSFEDVfsfpVKTgaDCKNIDGLVLPGGESTTMGRLIGiDSDLKENLESLVARGVPMWGTCAGMILLSKKSHGGKFP 116
                    46667777777766666544555555567889***************9964899************************99998877654 PP

>> DJ-1_PfpI  DJ-1/PfpI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   4.4e-05      0.13      57     110 ..      54     109 ..      38     114 .. 0.82
   2 ?   -3.1   0.0         2     6e+03      85     104 ..     181     200 ..     174     202 .. 0.55

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 4.4e-05
                 CTCCG-SEEEE--BHHH..HHHHHTSHHHHHHHHHHHHTT-EEEEETTTHHHHHHT CS
   DJ-1_PfpI  57 vkaaeyDalvlpGGrag..perlrenekvvelvkefaekgklvaaICagpqlLaaa 110
                 +++++ D lvlpGG++      +  ++ + e + + + +g ++   Cag +lL+++
  EPX74639.1  54 ADCKNIDGLVLPGGESTtmGRLIGIDSDLKENLESLVARGVPMWGTCAGMILLSKK 109
                 568899********984113456678899********************9999986 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 2
                 HHHHHHHHTT-EEEEETTTH CS
   DJ-1_PfpI  85 elvkefaekgklvaaICagp 104
                  l+ + +++  +v+a+ +gp
  EPX74639.1 181 VLATTTHKDREVVVAVEQGP 200
                 44445555556666665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       246  (0.0137208); expected 358.6 (0.02)
Passed bias filter:                      238  (0.0132746); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.41u 0.28s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1631.30
//
Query:       EPX74640.1  [L=629]
Description: RNA-binding protein Seb1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-05   24.5   0.0    2.9e-05   23.8   0.0    1.4  1  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
    0.00021   22.0   0.0    0.00065   20.5   0.0    1.9  1  CTD_bind  RNA polymerase II-binding domain.


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.0   3.2e-09   2.9e-05       1      70 []     417     481 ..     417     481 .. 0.94

  Alignments for each domain:
  == domain 1  score: 23.8 bits;  conditional E-value: 3.2e-09
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrelk 70 
                 lf+g++++ v e  L+ +F+ fG ++s+ l ++      +++f ++  +e+AekA  a+ +  + +++++
  EPX74640.1 417 LFLGGITRAVREPVLRSMFERFGAVQSLILNHN-----YRHGFLKMFRREAAEKAQVAMENVPFADTTIR 481
                 89***********************99988885.....*********************99999998885 PP

>> CTD_bind  RNA polymerase II-binding domain.
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   7.3e-08   0.00065       1      60 [.      59     132 ..      59     135 .. 0.69

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 7.3e-08
    CTD_bind   1 kLnllYLaNdvlq...nskrkq........kdefapaFapvlpea...........fadaykkapekikkklkrllniWeer 60 
                 kL  lY+++++++   + ++k+        +     +F+                 +ada ++ap+ +  k+ +l +iW++ 
  EPX74640.1  59 KLGALYILDSIVRsfqDGAKKNnesfespvD----ASFSG----GwckaaevteslVADATHHAPSAHLPKILKLCDIWDKA 132
                 899**********665446666355533332....33333....1333355555558888889****************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (629 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       577  (0.0321825); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.30s 00:00:00.94 Elapsed: 00:00:00.46
# Mc/sec: 4151.46
//
Query:       EPX74641.1  [L=651]
Description: two-component GAP Byr4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (651 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       679  (0.0378716); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 4593.57
//
Query:       EPX74642.1  [L=313]
Description: coproporphyrinogen III oxidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   6.9e-130  432.1   0.1   7.8e-130  431.9   0.1    1.0  1  Coprogen_oxidas  Coproporphyrinogen III oxidase
  ------ inclusion threshold ------
       0.13   12.2   0.0       0.28   11.1   0.0    1.6  1  DUF4298          Domain of unknown function (DUF4298)


Domain annotation for each model (and alignments):
>> Coprogen_oxidas  Coproporphyrinogen III oxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  431.9   0.1  8.7e-134  7.8e-130       1     295 [.      13     312 ..      13     313 .] 0.97

  Alignments for each domain:
  == domain 1  score: 431.9 bits;  conditional E-value: 8.7e-134
  Coprogen_oxidas   1 kveellkelqdeivkaleeldgkakfkedewereeggggisrvledgkvfekagvnvsvvegklpesavkqmraekk...eeleeleffaagvs 91 
                      ++eel+ ++q++iv+ le++d ++kf +d+w++ egg gis+v++dg+vfek+gvn+s+v+g l+++av++mra+++   ++++el+ffaag+s
       EPX74642.1  13 RMEELILDVQQKIVAGLEAID-GQKFYQDRWTKGEGGYGISCVIQDGNVFEKGGVNTSIVQGVLSQDAVQRMRANHDgidRSAKELPFFAAGIS 105
                      699******************.89****************************************************999989999********* PP

  Coprogen_oxidas  92 lvihprnPlvPtvhlnyryfeaee..kkkawWFgGgaDLtPsylfeedavhfHktlkeacdkhdkelypkfKkwcDeyFyikhRkeaRGvGGif 183
                      +vihp+nP++Pt+hlnyryfe+ +   kk wWFgGgaDLtPs lfeeda+hfHk +keacd+hd+++yp+fKkw+D+yF+ikhRke+RG+GGif
       EPX74642.1 106 MVIHPSNPMAPTTHLNYRYFELVNsdGKKIWWFGGGADLTPSILFEEDARHFHKLHKEACDRHDPTFYPRFKKWADDYFLIKHRKETRGIGGIF 199
                      **********************9865489***************************************************************** PP

  Coprogen_oxidas 184 fddlk.esaeelfafvksvgeaflpaYlpivekrkdtpyteeerewqllrrgryveFnLvyDrGtkfGLqte.grvesiLmslPptarweyele 275
                      fddl+ ++ eelfafvk+++ +flp+Y+pi++krkd+++te+++e+ql+rrg y eFn++yDrGt fGLq++  rvesiLm+lP +a+w+y+++
       EPX74642.1 200 FDDLSdKDPEELFAFVKDCAYTFLPSYIPIMKKRKDMEFTEDDKEFQLIRRGFYTEFNVMYDRGTWFGLQAPnPRVESILMTLPLHASWRYNYQ 293
                      ****94559***************************************************************9********************* PP

  Coprogen_oxidas 276 peegseeaellevlkkpreW 295
                      p+ g ++++l+e+ ++p eW
       EPX74642.1 294 PK-GERHKALIEATHHPVEW 312
                      95.779999*********** PP

>> DUF4298  Domain of unknown function (DUF4298)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   3.2e-05      0.28      37      73 ..      36      83 ..       8      93 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 3.2e-05
                HHHTSHHH............HHHHTS--SS.....--SSTTSSSHHHHH CS
     DUF4298 37 eYYqseqw............redleasnkgelpqelkysvLSEDgiyna 73
                ++Y  + w             +d + ++kg + +++ ++vLS+D++  +
  EPX74642.1 36 KFY-QDRWtkgeggygiscvIQDGNVFEKGGVNTSIVQGVLSQDAVQRM 83
                566.34466666666666669************************9666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (313 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       404  (0.0225333); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2218.03
//
Query:       EPX74643.1  [L=81]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       417  (0.0232584); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.26s 00:00:00.62 Elapsed: 00:00:00.42
# Mc/sec: 580.97
//
Query:       EPX74644.1  [L=524]
Description: F1-ATPase beta subunit Atp2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-62  211.4   0.0    1.8e-62  210.8   0.0    1.3  1  ATP-synt_ab    ATP synthase alpha/beta family, nucleotide-bin
    1.5e-21   76.6   0.5    5.6e-21   74.8   0.5    2.0  2  ATP-synt_ab_N  ATP synthase alpha/beta family, beta-barrel do
     0.0041   16.5   0.2     0.0083   15.5   0.2    1.5  1  ATPase         KaiC
  ------ inclusion threshold ------
      0.021   14.7   0.0      0.051   13.5   0.0    1.6  1  RsgA_GTPase    RsgA GTPase
      0.021   14.0   0.4      0.082   12.1   0.1    2.0  2  NB-ARC         NB-ARC domain
      0.052   13.5   0.0       0.11   12.4   0.0    1.5  1  NACHT          NACHT domain
      0.057   13.7   0.8        0.5   10.7   0.1    2.2  2  AAA_19         AAA domain
       0.08   13.3   0.0       0.26   11.7   0.0    1.9  1  RNA_helicase   RNA helicase
       0.13   12.7   0.1        3.4    8.1   0.0    2.6  2  AAA            ATPase family associated with various cellular


Domain annotation for each model (and alignments):
>> ATP-synt_ab  ATP synthase alpha/beta family, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  210.8   0.0     9e-66   1.8e-62       1     213 []     182     400 ..     182     400 .. 0.96

  Alignments for each domain:
  == domain 1  score: 210.8 bits;  conditional E-value: 9e-66
                  SSHHHHHHS-EBTT-EEEEEESTTSSHHHHHHHHHHHSSTSS..EEEEEEESEEHHHHHHHHHHCHHSSGGG.....GEEEEEEETTS-HHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab   1 GirvlDalfpivqGqrtlipgafgvGktvisqslskqsnsdd..aiiyvgiGergnevaevleefpegtimk.....rtvlvantsnepvaareasiy 91 
                  Gi+v+D+l p+++G++++++g++gvGktv +q+l+++  +++  +++++g+Ger++e +++++e++e++++k     +  lv+ ++nep+ ar ++++
   EPX74644.1 182 GIKVVDLLAPYCRGGKIGLFGGAGVGKTVFIQELINNIAKAHggYSVFCGVGERTREGNDLYHEMQETGVIKlegdsKAALVFGQMNEPPGARARVAL 279
                  99*********************************998887457***********************8855555555********************* PP

                  HHHHHHHHHHH.TTSEEEEEEETHHHHHHHHHHHHHHTTTSBEGGGSBTTHHHHHHHHHTTSEEETSSEEEEEEEEEEE-GGCSTTSHHHHHHHHHSS CS
                  xxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab  92 tgitlAEyfrd.qgknvlliadslsrwaeAlreislrlgempadqgypaylgaklaslyERagkapdrtGsvtivaavspaggDfsdpvttatlgitd 188
                  tg+t+AEyfrd +g++vl+++d+++r+++A  e+s++lg++p++ gy+++l +++  ++ER++++  ++Gs+t+v+av+++++D++dp + +t++++d
   EPX74644.1 280 TGLTVAEYFRDvEGQDVLFFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTDMGAMQERITTT--KKGSITSVQAVYVPADDLTDPAPATTFAHLD 375
                  *****************************************************************..89***************************** PP

                  EEEEB-HHHHHTTBSSSBCTTTEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab 189 gfivLdkklaqrkhfPainvlvSvS 213
                  +++vL++++ + +++Pa+++l S S
   EPX74644.1 376 ATTVLSRSISELGIYPAVDPLDSKS 400
                  *********************9987 PP

>> ATP-synt_ab_N  ATP synthase alpha/beta family, beta-barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.8   0.5   2.8e-24   5.6e-21       1      69 []      57     125 ..      57     125 .. 0.98
   2 ?   -2.1   0.0         3   5.9e+03       4      26 ..     472     494 ..     470     501 .. 0.73

  Alignments for each domain:
  == domain 1  score: 74.8 bits;  conditional E-value: 2.8e-24
                    EEEEETTEEEEESST.SCETCTTEEEEECCETCSTEEEEEEEEEETTEEEEEESS-STTBBTTSEEEEES CS
  ATP-synt_ab_N   1 ivqviGpvvdvefgi.grlpgiynalevelvefgtlllgvalnlgedkVrvivmgstdGlsrGteVkrTG 69 
                    i qviG+vvd +f+  + lp i+ alev++ + ++l+l+va+++ge++Vr+i+m++t+Gl+rGt V +TG
     EPX74644.1  57 IKQVIGAVVDCHFEDsESLPSILSALEVKMAD-KRLVLEVAQHIGENTVRTIAMDGTEGLVRGTDVLDTG 125
                    67************99****************.************************************9 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 3
                    EETTEEEEESSTSCETCTTEEEE CS
  ATP-synt_ab_N   4 viGpvvdvefgigrlpgiynale 26 
                    + G +v+ ++ i    +i +  +
     EPX74644.1 472 IEGRLVSLKDTIRSFQEIVEGKH 494
                    77999999999987777766555 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.2   4.2e-06    0.0083       2      72 ..     180     251 ..     179     284 .. 0.89

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 4.2e-06
      ATPase   2 ktgIeglDeilkgGipegrvvlitGepGtGKtifalqFlikgaekygepgvfvtveepa...edlrenakslGw 72 
                 +tgI+  D +    + +g  + + G++G GKt+f ++ + + a+  g   vf  v e+    +dl++++++ G+
  EPX74644.1 180 ETGIKVVDLLA--PYCRGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFCGVGERTregNDLYHEMQETGV 251
                 68999888885..8999999*************************************9989999***9999987 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   2.6e-05     0.051      90     152 ..     186     248 ..     172     254 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 2.6e-05
                  HHHHHHHCTTSEEEEECSTTSSHHHHHHHHCTT-----S--------------SEEEEEETTT CS
  RsgA_GTPase  90 leelkellkdktsvlvGqSGvGKStLinallpelelktgevseklgrGkhTTtavellelaeg 152
                  ++ l++++++  + l G  GvGK+ +i +l+++   + g  s   g G  T     l++  ++
   EPX74644.1 186 VDLLAPYCRGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFCGVGERTREGNDLYHEMQE 248
                  6778999999889999**********************************9999998875444 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   4.1e-05     0.082      23      55 ..     198     230 ..     184     257 .. 0.86
   2 ?   -1.0   0.0      0.41   8.1e+02       8      28 ..     419     438 ..     414     488 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 4.1e-05
                 EEEEESTTSSHHHHHHHHCCSHCCCCCCBTEEE CS
      NB-ARC  23 valvGmgGvGKttlakqilnksdevegrFdsva 55 
                 ++l G +GvGKt+ +++ +n+ ++ +g + ++ 
  EPX74644.1 198 IGLFGGAGVGKTVFIQELINNIAKAHGGYSVFC 230
                 899******************999999998764 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.41
                 HHHHHHCTTTSCSEEEEEEES CS
      NB-ARC   8 viekLlekdelqslvvalvGm 28 
                 v++ L e ++lq +++a+ Gm
  EPX74644.1 419 VQQMLQEYKSLQ-DIIAILGM 438
                 455555555555.55555555 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   5.6e-05      0.11       6      28 ..     201     223 ..     198     287 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 5.6e-05
                 EC-TTTCHHHHHHHHHHHHCTS- CS
       NACHT   6 qGeaGsGKTtLlqklalawaegk 28 
                  G aG+GKT+++q+l+  +a+ +
  EPX74644.1 201 FGGAGVGKTVFIQELINNIAKAH 223
                 699*****************988 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1   0.00025       0.5      10      38 ..     195     223 ..     189     235 .. 0.85
   2 ?    0.9   0.0      0.26   5.1e+02      69     118 ..     368     448 ..     330     460 .. 0.60

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00025
      AAA_19  10 ekvllvtaGpGtGKTrvlkhivallvelg 38 
                  + + + +G+G GKT  +++ ++ + +++
  EPX74644.1 195 GGKIGLFGGAGVGKTVFIQELINNIAKAH 223
                 5667899**************99988876 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.26
      AAA_19  69 atTiHrlal....................................ldfddlltealelleeaeeekklqeee.llivDEfqdvdelq 118
                 atT+ +l                                       ++ ++     ++l+   e k lq+   +l  DE ++ d+l 
  EPX74644.1 368 ATTFAHLDAttvlsrsiselgiypavdpldsksrmmdpriigethYKLAGD---VQQMLQ---EYKSLQDIIaILGMDELSEADKLT 448
                 666666644666777777777777777766666666666555433222222...233333...455666666688899999999765 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00013      0.26       3      26 ..     200     223 ..     198     252 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00013
  RNA_helicase   3 lyGpsgeGKStlakeLakallkkl 26 
                   l+G +g+GK+++++eL+++++k+ 
    EPX74644.1 200 LFGGAGVGKTVFIQELINNIAKAH 223
                   89******************9766 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.0    0.0017       3.4       3      71 ..     200     307 ..     198     320 .. 0.57
   2 ?    1.5   0.0      0.19   3.7e+02      40      74 ..     413     445 ..     377     470 .. 0.71

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0017
                 EESSTTSSHHHHHHHHHHHH.THE...........................EEEEETTTCSSS......................STTHHHHHHHHHHH CS
         AAA   3 lyGppGtGKTllakavakel.gve...........................fleisgsellsk......................yvgesekkirelfk 51 
                 l+G  G+GKT +++ +++++ +++                           +        + k                       v  +   ++e+f+
  EPX74644.1 200 LFGGAGVGKTVFIQELINNIaKAHggysvfcgvgertregndlyhemqetgV--------I-KlegdskaalvfgqmneppgaraRVALTGLTVAEYFR 289
                 89****************9642223333333433444444444333333331........1.1333344444555555555555566667777777777 PP

                 HHHHTSTSEEEEEETGGGHH CS
         AAA  52 eakekakpsilfiDEidala 71 
                 +++ +   + +fiD+i +++
  EPX74644.1 290 DVEGQD--VLFFIDNIFRFT 307
                 765554..666777766655 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.19
                 THHHHHHHHHHHHHHHTSTS.EEEEEETGGGHHHHH CS
         AAA  40 gesekkirelfkeakekakp.silfiDEidalaksr 74 
                  + + +++++++e k+ ++   il +DE+    +++
  EPX74644.1 413 YKLAGDVQQMLQEYKSLQDIiAILGMDEL---SEAD 445
                 45577899999999999833355555554...3333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (524 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       611  (0.0340789); expected 358.6 (0.02)
Passed bias filter:                      569  (0.0317363); expected 358.6 (0.02)
Passed Vit filter:                        77  (0.00429472); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.57u 0.30s 00:00:00.86 Elapsed: 00:00:00.44
# Mc/sec: 3560.33
//
Query:       EPX74645.1  [L=611]
Description: 6-phosphofructo-2-kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-64  216.9   0.1    3.3e-64  216.2   0.1    1.3  1  6PF2K       6-phosphofructo-2-kinase
    1.9e-24   86.5   0.0    1.8e-22   80.0   0.0    2.3  1  His_Phos_1  Histidine phosphatase superfamily (branch 1)
  ------ inclusion threshold ------
      0.019   15.5   0.0       0.04   14.5   0.0    1.5  1  AAA_18      AAA domain
      0.093   13.2   0.0       0.17   12.3   0.0    1.5  1  AAA_17      AAA domain


Domain annotation for each model (and alignments):
>> 6PF2K  6-phosphofructo-2-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  216.2   0.1   7.4e-68   3.3e-64       5     221 ..     147     367 ..     143     369 .. 0.92

  Alignments for each domain:
  == domain 1  score: 216.2 bits;  conditional E-value: 7.4e-68
                 HHHHT..S-EEEEEESSTTSSHHHHHHHHHHHHHHTT--EEEEEHHHHHHHHHSS..---GGGGSTT-HHHHHHHHHHHHHHHHHHHHHHHTS--SEEE CS
       6PF2K   5 tvtnlknsklvivlvGLpargKtyiskkltrylkwlgvrtkvFnvgkyrreaska..lsdaeffrpdneealklreklalaalkdllaylneeegqvai 101
                 +++    +klvivlvG+pa+gK+yi +kl+ry +wl ++++ F vg+ rre   +   + a ff+ +nee  k+re la+++l++ll++l +e+g +++
  EPX74645.1 147 CGSYGIREKLVIVLVGIPATGKSYIGSKLVRYYNWLRYNCRFFSVGDKRREEGASkySMAAPFFDIENEELKKFREYLAMETLENLLHWLLNENGVIGV 245
                 556667789*****************************************965544488999************************************* PP

                 EES---SHHHHHHHHHHHHH.TT-EEEEEEEE--HHHHHHHHHHHHTTTSGGGTTS-HHHHHHHHHHHHHHHHTT-----TTTTT..TSEEEEEETTTT CS
       6PF2K 102 fDAtNttrerRklilefvee.nnlkvlflesicsdeeiikeNikevklsspDYkdketeeaikdflkRlenyekqyeplddeede..elsyIkvidvgk 197
                  DAtN+t +rRkli ++v++ +n+ ++fles+c++e i ++N+ ++  + pDY++ e+eea++d +kR+e y+k+yep+d++e+    l+y+kvi+vg 
  EPX74645.1 246 LDATNSTYQRRKLIYDRVSKeENISIMFLESMCTEEPIFQQNMILKARG-PDYEGFEPEEALADLKKRVEFYRKYYEPIDEREEAlpLLQYVKVINVGI 343
                 ***************99876156***********************999.******************************655542269********** PP

                 EEEEE---SHHHHHHHHHHTT--- CS
       6PF2K 198 slvvnnvqgylqsrivyyllNihl 221
                 +++ +n++g+l+++ vy++lN++ 
  EPX74645.1 344 KVITHNIEGFLTGQAVYFMLNLNI 367
                 *********************986 PP

>> His_Phos_1  Histidine phosphatase superfamily (branch 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.0   0.0   4.1e-26   1.8e-22       1     192 [.     372     582 ..     372     584 .. 0.89

  Alignments for each domain:
  == domain 1  score: 80.0 bits;  conditional E-value: 4.1e-26
                 EEEEE---BTTB--....TT----B-HHHHHHHHHHHHH.........HTTS---EE....................EE-SSHHHHHHHHHHHHCTT.- CS
  His_Phos_1   1 lyLvRHGetewnaegrlqgrtdvpLteeGreqAealaer.........lagepidai....................ysSplkRarqTaeliaealg.l 69 
                 ++L+R G++    +gr++g  ++pLt++G++ Ae la++         l                            +sS  +Ra +T + +    g  
  EPX74645.1 372 IWLTRPGQSNDTIAGRVGG--NAPLTDLGVQYAEDLAKFidrqrvlwqL-------RetterlnakkptfeaeafniWSSVRQRATETSQFFNP--GvY 459
                 79************98776..68***************94444444441.......133555566677777899999***************97..448 PP

                 -EEE-GGGS----GGGTT-B.HHHHHH..HSHHHHHHHHH-GGG-B..S-BHHHHHHHHHHHHHHHHHHTTTSEEEEEE-HHHHHHHHHHHHT--GGGG CS
  His_Phos_1  70 pveldegLrEidfGdweglttaeiaeeypeeleawlrdpadvrppg..gEsledvaaRvaaaleelaarhegetvlvVsHggvirallarllglpleel 166
                 +v++   L++++fG  eglt +e ae+ypee++  +r++ ++r++g  gEs+ dv+ R+++++ el++  ++  vlv++H  v ++l++++l++++ee+
  EPX74645.1 460 DVKKMRMLNDLNFGSREGLTMKEFAEKYPEEYQVIRRKDVSYRFSGlgGESYLDVVHRLQPIIVELERCSGN--VLVIAHRVVSNILMTYFLNYSPEEI 556
                 ******************************************************************988765..************************* PP

                 GGB---TT-EEEEEE-SS-EEEEEEE CS
  His_Phos_1 167 rrleldnaslsvlefdeggwrlvrln 192
                  ++ l+ ++l+ +e d+   +++ +n
  EPX74645.1 557 IDVGLPLHTLYCIESDRYSTVCKFYN 582
                 *****************999998887 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   8.9e-06      0.04       1      85 [.     158     252 ..     158     270 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 8.9e-06
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf...........gvnlrdvakenglllevdpealdeskrldedkldklldaleenssaleegknl.vidghlae 85 
                 I+l G+p++GK+ ++  L +  +              +  + a++  +  ++++ + +e k+++e   ++ l++l  +     e++++ v+d   + 
  EPX74645.1 158 IVLVGIPATGKSYIGSKLVRYYNWlryncrffsvgDKRREEGASKYSMAAPFFDIENEELKKFREYLAMETLENLLHWLL--NENGVIgVLDATNST 252
                 89****************887433666778788833344444666666666777699********************975..555555588877665 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   3.8e-05      0.17       1      58 [.     161     221 ..     161     298 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 3.8e-05
                 EE-TTSSHHHHHHHHHH.....HHTEEEEEHHHHHHHHHHTTTSHSSHHHHCTSHHHHHHHHH CS
      AAA_17   1 lGgPGsGKgtqceklve.....kygfthlsaGdllreeakrgglakardemrklpleekkelq 58 
                 +G+P  GK+ + +klv+     +y+  ++s Gd  ree +++ + +a   + + ++ee k+++
  EPX74645.1 161 VGIPATGKSYIGSKLVRyynwlRYNCRFFSVGDKRREEGASKYS-MAAPFF-DIENEELKKFR 221
                 7***************955555569***********99877764.333333.23333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (611 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       502  (0.0279993); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.31s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 4226.74
//
Query:       EPX74646.1  [L=759]
Description: GTP binding protein Sey1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   4.3e-252  838.5   9.9   3.9e-251  835.4   9.9    1.9  1  RHD3       Root hair defective 3 GTP-binding protein (RHD3)
    5.6e-07   29.1   0.2    1.1e-06   28.1   0.2    1.5  1  GBP        Guanylate-binding protein, N-terminal domain
      8e-07   29.1   0.0    2.1e-06   27.8   0.0    1.8  1  MMR_HSR1   50S ribosome-binding GTPase
    2.4e-05   24.4   0.0    5.8e-05   23.2   0.0    1.7  1  Dynamin_N  Dynamin family
  ------ inclusion threshold ------
      0.033   14.4   0.0       0.08   13.2   0.0    1.7  1  AAA_28     AAA domain
      0.056   13.0   0.1       0.17   11.4   0.0    1.7  1  FeoB_N     Ferrous iron transport protein B


Domain annotation for each model (and alignments):
>> RHD3  Root hair defective 3 GTP-binding protein (RHD3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  835.4   9.9  1.3e-254  3.9e-251       1     732 [.      43     739 ..      43     750 .. 0.97

  Alignments for each domain:
  == domain 1  score: 835.4 bits;  conditional E-value: 1.3e-254
                 EEBTTSSHHHHHHHHS--------TTS------SEEEEE-S-EE--SSEEEEEEEE-BSSSSSSS-CHHHHHHHHHHHHH-SEEEEEEEGGGTTSSTTT CS
        RHD3   1 lGsqStGKSTLLNhLFgTnFsvmdaseRqqTTKGiWlakaknvgksepnilvmDvEGtDGrERGEDqdFErksALFalavsevlivNiWehqvGlyqga 99 
                 lGsqStGKSTLLN+LFgT+F+vmda +RqqTTKGiWl+ka++       ilvmDvEGtDGrERG+DqdFErksALF++a+sev+ivN+WehqvGlyqg+
  EPX74646.1  43 LGSQSTGKSTLLNQLFGTRFDVMDAGKRQQTTKGIWLSKAQEA-----PILVMDVEGTDGRERGDDQDFERKSALFSIATSEVIIVNMWEHQVGLYQGS 136
                 7**************************************9985.....9************************************************** PP

                 THHHHHHHHHHHHHHHCCSHSS---EEEEEEEESE-SSS-HHHHHHHHHHHHHHHHHHS---GGGTT--HHHHEEEEEEEEE-TTT-HHHHHHHHHHHH CS
        RHD3 100 NmaLLKTVfeVnlrLFlkdkdsdrkvlLlfViRDkvgvTplenLektltedlqkiWdslsKPegleessledfFdvefvaLshkelkeeqFkeevkkLr 198
                 Nm LLKTV+eV l+LF+ +k   +++lL+fViRD++g+T++enL++t+++dl+++W+slsKP glees+++dfFd+ f++L+hk+l++e+F  +v++Lr
  EPX74646.1 137 NMVLLKTVLEVHLQLFHSKK---ERSLLQFVIRDYIGTTSMENLSETIKTDLTNVWSSLSKPPGLEESKITDFFDLGFTGLPHKILCSEAFDTAVDSLR 232
                 ****************8776...9*************************************************************************** PP

                 HHHTTS....--S--GGGS-SS-HHHHHHHHHHHHHHHHTTTTT-HHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTS......SS--SS--HHHHHHHH CS
        RHD3 199 erfveskeiengvfkpeyhkriPadgfslyaeqiWdqieeNkDLDLPtqqvlvAqfrcdEianevleefiaaiaeleekqrelkeaaeaglleelgkkl 297
                  rf +s + +++vf p+yhkriPadgfsly+++iWd+ie+NkDLDLPtqq+l+Aq+rcdEi+ e++e f++a+++l+      +e+  ++l+e+l++++
  EPX74646.1 233 ARFSNS-DASDYVFDPSYHKRIPADGFSLYTREIWDTIENNKDLDLPTQQQLLAQYRCDEIIAEAMEPFSKACSILQ------SEFLPGNLCENLSTRM 324
                 *****9.78*******************************************************************9......9*************** PP

                 HHHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HCT.TTTHHHHHHHHHHHHHHHHHHHH.HTTSTTTT CS
        RHD3 298 aslrekaleeydteAsryekgvyeeKrqeLeekvdsklkalfqavlealrkellekfkeavekalkagedFaesvkekkkklvekfdeeaeslvveqak 396
                 ++l e+++++yd++A ry++++ye+K+ eL   vd+ l+++fqa+l+al+k+l+ +f+ a e ++ ++++F+e ++++++k+ ++++eea++l++ +++
  EPX74646.1 325 QDLYEQVVRDYDRQAKRYNHAIYEKKKLELLRTVDTSLYVFFQAQLNALQKQLVSSFSGAAE-KFPSDKSFKELSSQEIEKCKSRMQEEAQTLMIAGIE 422
                 ************************************************************99.9*********************************** PP

                 S--.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS--TTCHHHHHHHHTTSSS.........STSS..---TTTTCTTHHHH CS
        RHD3 397 wdasdkiilklekdieaviaklrkeelkelvervekkleselseavellleklskevWdrvlkefkseveeavsklkdavsgf..elseeevdkalknl 493
                 wd+  +++lkl++++e+ ++ +++++l + ++++ + ++++++e++e++l+k++ +vWd +l+e+    ++a+ ++  +  +f   ++ e ++++++n+
  EPX74646.1 423 WDS-TQFLLKLSEELENASTAICEQKLFSRIAEMRTDVQTQIGESLEIALQKPNLKVWDGLLDELSMHRKQAEDEIIRVFPFFidSTKPEVTQTYIHNF 520
                 ***.5***************************************************************************999966666788999**** PP

                 HHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHTBBSSTBB----SHHHHCCSSHHHHHHTTSSHHHHTTTB-TTS-B---SS--SSCHHHTTT--... CS
        RHD3 494 kkkswlvlekkikeelseekillrlrdrFedvFryDedgvPrlwkkkedieaiykearekaLkllsvlsvirladeseniekveiveledeekseasee 592
                 +k  w++++kk + e+s   +++rlr +Fe+ FryD+dg+P+l+kk+++++ +y+e+ +k+L+l++vls ++ +d+  +    +++e  ++ +++    
  EPX74646.1 521 HKDVWMAFRKKLNVEMSDLLLQQRLRVYFEENFRYDADGMPKLFKKSDTLDLDYRESVSKSLELIKVLSCVKYSDGRIPELGFDVKEIDSSFSTPN--- 616
                 ****************************************************************************99888888877766666655... PP

                 ......-------TTTS-TTBSS-HHHHCCSTTCHHHHHHHHHTTTCCTT-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        RHD3 593 svtsidgldesegeeveeeatiltevkkkellvqFkkeadltvveakrsainnntqiPlyiyvlllvLGwNEfvavlrNPlylllllvlglvvyvlyql 691
                                   + til++++ ++ +v+ k++adl+++++krs++ ++t+iP+y+++lllvLGwNEf+av+rNP++++lll++g  vy ly  
  EPX74646.1 617 -----------------DFLTILNRKRISDTSVNLKRTADLIYLDSKRSVVSTQTRIPPYFWALLLVLGWNEFMAVIRNPFFFMLLLIGGSSVYILYAT 698
                 .................799******************************************************************************* PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        RHD3 692 nllgpalkvveaamnellklakeklrefleedeevresqet 732
                 +++gpa+ ++++a   +++  +ek +e ++++++ re+  +
  EPX74646.1 699 GMIGPAKVLANRAAGGMVDFVTEKVAESYQDRSKIREKSYS 739
                 ********************************999987654 PP

>> GBP  Guanylate-binding protein, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.1   0.2   3.8e-10   1.1e-06      22     115 ..      38     127 ..      22     186 .. 0.80

  Alignments for each domain:
  == domain 1  score: 28.1 bits;  conditional E-value: 3.8e-10
                 EEEEEEEBTTSSHHHHHHHHHTBSSSSESSSCSSST-SSEEEESCE-SSSTCEEEEEEEEECBTTTTTSSHHHHHHHHHH.HHHH-SEEEEEEES CS
         GBP  22 vvvaivGlyRkGksfLlnklarkkkGFslrstvesetkGiliWcephpkkekvalvLlDteGlgDveksdvkddatiFaL.avllssvfvYnssq 115
                  vva+ G   +Gks Lln+l + +     ++  ++ tkGi++      k ++  ++++D eG+   e++d++d     aL ++ +s v + n+ +
  EPX74646.1  38 HVVAVLGSQSTGKSTLLNQLFGTRFDVMDAGKRQQTTKGIWL-----SKAQEAPILVMDVEGTDGRERGDDQDFERKSALfSIATSEVIIVNMWE 127
                 59**********************9999999999******98.....4667888999**************997766665355567788888654 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.0   7.1e-10   2.1e-06       2      81 ..      40     123 ..      39     165 .. 0.76

  Alignments for each domain:
  == domain 1  score: 27.8 bits;  conditional E-value: 7.1e-10
                 EEEEESTTSSHHHHHHHHHTS...TEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSS....HHHHHHHHHHHHHHHHCTSEEEE CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltge...kaivsdkpgtTrdinegrvklkgkeielvDtpGlie....gaseekglgkaflaleeadlill 81 
                 va++G   +GKStL+n+l+g+   +  ++++++tT+ i   + +  + +i ++D+ G  +    g++++ + + a+ ++  +++i++
  EPX74646.1  40 VAVLGSQSTGKSTLLNQLFGTrfdVMDAGKRQQTTKGIWLSKAQ--EAPILVMDVEG-TDgrerGDDQDFERKSALFSIATSEVIIV 123
                 89******************844456889999******999998..899********.65332333333345555555555666555 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.0     2e-08   5.8e-05       1      29 [.      40      68 ..      40     131 .. 0.77

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 2e-08
                EEEEEBTTTTHHHHHHHHHTS--S---SS CS
   Dynamin_N  1 iavvGsqSsGKSSvlnaLlgedilprgpn 29
                +av+GsqS GKS++ln+L g ++ +++++
  EPX74646.1 40 VAVLGSQSTGKSTLLNQLFGTRFDVMDAG 68
                79******************999876655 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   2.7e-05      0.08       2      22 ..      40      60 ..      39      74 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.7e-05
      AAA_28  2 ivitGgestGKTtlleaLaar 22
                ++++G +stGK+tll++L  +
  EPX74646.1 40 VAVLGSQSTGKSTLLNQLFGT 60
                799**************9755 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   5.5e-05      0.17       2      28 ..      39      65 ..      38      97 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 5.5e-05
                EEEEEESTTSSHHHHHHHHHTTSEEEE CS
      FeoB_N  2 tvalvGnpnvGkttlfnaltgakqkvg 28
                 va++G + +Gk+tl+n+l g++ +v 
  EPX74646.1 39 VVAVLGSQSTGKSTLLNQLFGTRFDVM 65
                589******************998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (759 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       807  (0.0450109); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.67u 0.26s 00:00:00.93 Elapsed: 00:00:00.42
# Mc/sec: 5478.57
//
Query:       EPX74647.1  [L=218]
Description: tat binding protein 1(TBP-1)-interacting protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.2e-25   88.3   0.1    5.8e-25   87.0   0.1    1.8  1  TBPIP            TBPIP/Hop2 winged helix domain
    0.00026   21.1   4.7    0.00035   20.7   1.0    2.5  2  TssO             Type VI secretion system, TssO
     0.0003   20.3   2.8    0.00039   19.9   0.1    2.7  3  Nup54_57_C       NUP57/Nup54 C-terminal domain
  ------ inclusion threshold ------
      0.011   15.9   1.8      0.011   15.9   1.8    2.8  2  Seryl_tRNA_N     Seryl-tRNA synthetase N-terminal domain
      0.017   15.1   6.4      0.017   15.1   6.4    2.1  2  FlxA             FlxA-like protein
      0.061   13.2   6.3       0.71    9.8   0.4    2.4  2  NleF_casp_inhib  NleF caspase inhibitor
      0.063   13.4   1.0        1.2    9.3   0.4    2.5  2  TolA_bind_tri    TolA binding protein trimerisation
      0.077   11.9   1.2       0.35    9.7   0.0    2.2  2  DUF3375          Protein of unknown function (DUF3375)
      0.085   12.9   0.0         14    5.8   0.1    2.5  2  DUF1192          Protein of unknown function (DUF1192)
      0.088   12.2   5.5      0.089   12.2   0.9    2.1  2  NBP1             Fungal Nap binding protein NBP1
      0.092   12.9   3.0       0.39   10.9   0.0    2.4  2  Interferon       Interferon alpha/beta domain
      0.094   12.5   2.5        5.3    6.9   0.2    2.5  2  DivIC            Septum formation initiator
       0.13   12.6   6.0       0.18   12.2   2.7    2.3  2  YlqD             YlqD protein
       0.14   12.3   0.1       0.65   10.1   0.0    2.1  2  Helicase_C_3     Helicase conserved C-terminal domain
       0.26   10.8   6.5        4.9    6.7   6.5    2.6  1  PspA_IM30        PspA/IM30 family
       0.36   11.1   2.2        1.8    8.9   0.0    3.1  3  Mnd1             Mnd1 HTH domain
       0.36   11.2   3.2        9.3    6.7   0.2    2.5  2  LPP              Lipoprotein leucine-zipper
       0.39   11.4   4.3        8.5    7.1   0.1    2.7  3  YabA             Initiation control protein YabA
       0.63   10.1   7.4        2.1    8.4   5.2    2.4  2  Mod_r            Modifier of rudimentary (Mod(r)) protein
        1.1    9.6   4.5          2    8.8   0.2    2.6  2  Rx_N             Rx N-terminal domain
        1.6    8.4   8.0        3.9    7.1   0.5    2.6  3  GrpE             GrpE
        3.9    8.0   5.5         15    6.1   0.3    2.8  3  DUF4094          Domain of unknown function (DUF4094)


Domain annotation for each model (and alignments):
>> TBPIP  TBPIP/Hop2 winged helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.0   0.1   7.2e-28   5.8e-25       1      61 [.      16      76 ..      16      77 .. 0.99

  Alignments for each domain:
  == domain 1  score: 87.0 bits;  conditional E-value: 7.2e-28
       TBPIP  1 eaeelvleylqeqnrPfsvqdvvanlqkklgKtavqkaLdeLvdegkiieKeyGKqkiYla 61
                eae+++ +yl+++nrPfs++d++anl++ ++K+++qk+L++L+d+g+i+ K yGKq++Y++
  EPX74647.1 16 EAEKMIHDYLRRTNRPFSATDISANLKNAVTKQVAQKILEQLRDSGQIHGKSYGKQSVYVC 76
                79**********************************************************9 PP

>> TssO  Type VI secretion system, TssO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.2      0.29   2.4e+02      67      94 ..      17      44 ..       3     110 .. 0.65
   2 !   20.7   1.0   4.3e-07   0.00035      35     130 ..     110     204 ..     105     218 .] 0.88

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.29
        TssO 67 iykkIdsLkpevnavfleneIkkdlndi 94
                 +k+I  +   +n +f   +I+ +l+++
  EPX74647.1 17 AEKMIHDYLRRTNRPFSATDISANLKNA 44
                5566666666666666666666666443 PP

  == domain 2  score: 20.7 bits;  conditional E-value: 4.3e-07
        TssO  35 splqekeil.lkelerkkkfeekqkelkkkvdsiykkIdsLkpevnavfleneIkkdlndikntygknssdeRykmyaqiakfykmlledKkelksv 130
                 ++++++e + l +    +++ +k  +l k ++++++k+d L+++  + + e+e k+ l   ++++ k+ + +R km++++ +++ + le+ kel+++
  EPX74647.1 110 YKVKSTEFQiLNNSPSPAEIHQKISTLDKDIEQTKSKLDCLQAGSVKNVTEEEMKETLA--NHDFVKKGYLQRRKMFYNLWNLITDCLENPKELWDK 204
                 55666666656777788999**************************************7..58999*****************************97 PP

>> Nup54_57_C  NUP57/Nup54 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       8.3   6.8e+03       6      11 ..      19      24 ..      17      25 .. 0.76
   2 ?   -2.5   0.0       4.8   3.9e+03       4       9 ..      50      55 ..      50      55 .. 0.86
   3 !   19.9   0.1   4.8e-07   0.00039       9      29 .]      90     110 ..      89     110 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 8.3
  Nup54_57_C  6 KILeDY 11
                K  +DY
  EPX74647.1 19 KMIHDY 24
                778999 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 4.8
  Nup54_57_C  4 aKKILe 9 
                a KILe
  EPX74647.1 50 AQKILE 55
                78***8 PP

  == domain 3  score: 19.9 bits;  conditional E-value: 4.8e-07
  Nup54_57_C   9 eDYekQLqHLkKElEsikkDy 29 
                  D + Q+q Lk ElEs+k++y
  EPX74647.1  90 MDLDRQIQTLKGELESVKAEY 110
                 58899***************9 PP

>> Seryl_tRNA_N  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   1.1       0.5   4.1e+02      49      64 ..      39      54 ..       2      66 .. 0.61
   2 ?   15.9   1.8   1.4e-05     0.011      26      95 ..      84     152 ..      81     169 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.5
                  HHHHHHHHHHCCCCCC CS
  Seryl_tRNA_N 49 qaerNelskeIgkakk 64
                   + +N+++k++++++ 
    EPX74647.1 39 ANLKNAVTKQVAQKIL 54
                  3457888888888765 PP

  == domain 2  score: 15.9 bits;  conditional E-value: 1.4e-05
                   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCTTS-TCCCCCCCHHHHHHHHHHHHHHHHHHH CS
  Seryl_tRNA_N  26 advdelleldekrrelqveleelqaerNelskeIgkakkkkedaeeliaevkelkeelkaleaelkelea 95 
                   a  d+l++ld++ ++l+ ele+++ae +  s e++ + ++    +e+ +++++l +++++++ +l+ l+a
    EPX74647.1  84 ASSDQLMDLDRQIQTLKGELESVKAEYKVKSTEFQILNNSP-SPAEIHQKISTLDKDIEQTKSKLDCLQA 152
                   6789*******************************999886.7778888888888888888888876654 PP

>> FlxA  FlxA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1       5.6   4.6e+03      25      67 ..      48      51 ..      35      66 .. 0.53
   2 ?   15.1   6.4   2.1e-05     0.017      14      91 ..      84     166 ..      78     175 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 5.6
        FlxA 25 QiknlqkqLkelsesdeltkeekkkqqqliqaQIqqlqaQIaq 67
                Q+                                       aq
  EPX74647.1 48 QV---------------------------------------AQ 51
                22.......................................11 PP

  == domain 2  score: 15.1 bits;  conditional E-value: 2.1e-05
        FlxA  14 gsasqiasLqkQiknlqkqLkelses.deltkeekk.....kqqqliqaQIqqlqaQIaqlqqqqaekaqekqqsekeeksksk 91 
                  s++q+  L +Qi++l+ +L++++++ + +++e  +         +i ++I+ l + I+q +++ +  ++ + ++ +ee++k++
  EPX74647.1  84 ASSDQLMDLDRQIQTLKGELESVKAEyKVKSTE-FQilnnsPSPAEIHQKISTLDKDIEQTKSKLDCLQAGSVKNVTEEEMKET 166
                 6889999*******************8666666.33355558889*******************99999999988888888766 PP

>> NleF_casp_inhib  NleF caspase inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.8     0.011       9.3      32      75 ..      76     121 ..      35     125 .. 0.77
   2 ?    9.8   0.4   0.00087      0.71      39     107 ..     128     198 ..     123     212 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.011
  NleF_casp_inhib  32 TaeekikE.lsdkltklknsvlseredlYev.edykleggqkveLk 75 
                        + +++E  sd+l +l +++++ +++l  v  +yk+++ +  +L+
       EPX74647.1  76 CLQDCLEEaSSDQLMDLDRQIQTLKGELESVkAEYKVKSTEFQILN 121
                      45678888668********************99****999887776 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00087
  NleF_casp_inhib  39 ElsdkltklknsvlseredlYevedykleggqkveLkegitaed..Rdnylkdlvalyqiknavkekidna 107
                      E+ +k+  l +++++++++l +    +++ + + e+ke    +d  +  yl+    +y++ n++ + ++n 
       EPX74647.1 128 EIHQKISTLDKDIEQTKSKLDCLQAGSVKNVTEEEMKETLANHDfvKKGYLQRRKMFYNLWNLITDCLENP 198
                      8899*******************999999999999999988877556778888888888888888877554 PP

>> TolA_bind_tri  TolA binding protein trimerisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.4    0.0015       1.2      25      45 ..      87     107 ..      81     116 .. 0.76
   2 ?    2.2   0.0      0.23   1.9e+02      11      41 ..     118     147 ..     107     153 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.0015
  TolA_bind_tri  25 qqlealqqelreLRGqiEelq 45 
                     ql +l +++++L+G++E  +
     EPX74647.1  87 DQLMDLDRQIQTLKGELESVK 107
                    588888888888888888765 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.23
  TolA_bind_tri  11 rilearsqlllelqqqlealqqelreLRGqi 41 
                    +il++ s +  e++q++++l +++ + + ++
     EPX74647.1 118 QILNN-SPSPAEIHQKISTLDKDIEQTKSKL 147
                    44554.7999999999999999998876555 PP

>> DUF3375  Protein of unknown function (DUF3375)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.1      0.33   2.7e+02     137     160 ..      86     110 ..      71     120 .. 0.77
   2 ?    9.7   0.0   0.00043      0.35     137     175 ..     130     168 ..     123     171 .. 0.92

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.33
     DUF3375 137 eeRlaeLeaeiaeidaeidrlra.g 160
                 +  l +L+++i+ ++ e++ ++a  
  EPX74647.1  86 SDQLMDLDRQIQTLKGELESVKAeY 110
                 4567889999999999999999844 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00043
     DUF3375 137 eeRlaeLeaeiaeidaeidrlrageveelddeqvlerir 175
                  + +  L+++i++ + ++d l+ag v+ +++e+++e + 
  EPX74647.1 130 HQKISTLDKDIEQTKSKLDCLQAGSVKNVTEEEMKETLA 168
                 67899*******************************986 PP

>> DUF1192  Protein of unknown function (DUF1192)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.1     0.017        14      24      47 ..      91     114 ..      87     116 .. 0.90
   2 ?    4.4   0.0     0.049        40      21      44 ..     125     148 ..     123     154 .. 0.87

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.017
     DUF1192  24 ELeerIalLeaEIaRleaaiakkk 47 
                 +L+  I++L+ E + ++a+ + k+
  EPX74647.1  91 DLDRQIQTLKGELESVKAEYKVKS 114
                 89****************998775 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.049
     DUF1192  21 SveELeerIalLeaEIaRleaaia 44 
                 S +E+++ I++L + I+ ++ +++
  EPX74647.1 125 SPAEIHQKISTLDKDIEQTKSKLD 148
                 568***************999886 PP

>> NBP1  Fungal Nap binding protein NBP1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.9   0.00011     0.089     155     213 ..      47     112 ..      18     123 .. 0.87
   2 ?    2.5   0.3     0.095        77     194     251 ..     130     187 ..     125     199 .. 0.63

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00011
        NBP1 155 lkydkqmleqLrrgrssnkserr.......vslrnnnleeDqvvlLqkkikklesklkdlekeLei 213
                 ++  ++ leqLr + + + +++         +   ++  +Dq++ L ++i+ l+ +l++++ e ++
  EPX74647.1  47 KQVAQKILEQLRDSGQIHGKSYGkqsvyvcLQDCLEEASSDQLMDLDRQIQTLKGELESVKAEYKV 112
                 5567899********9999998889999997788999***********************999775 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.095
        NBP1 194 qkkikklesklkdlekeLeitkk.kLkFakeknkLleslLddanidseYvksRrdiknl 251
                 ++ki  l++ +++++++L  ++  + k + e +++ e l +   + + Y++ R+   nl
  EPX74647.1 130 HQKISTLDKDIEQTKSKLDCLQAgSVKNVTE-EEMKETLANHDFVKKGYLQRRKMFYNL 187
                 4566666666666666666666423343333.355666666666666777777666665 PP

>> Interferon  Interferon alpha/beta domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00048      0.39      39     105 ..       5      71 ..       2      76 .. 0.91
   2 ?    1.1   1.4       0.5   4.1e+02      53      95 ..     107     148 ..      75     192 .. 0.54

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00048
                 HHHH.S---HHHHHHHHHHHHHHHHHHCCS--CCCT--HHHHHHHHHHHHHHHHHHHHCCCCCCCCC CS
  Interferon  39 eilsgsqlqkeqaalvlhemlqqifnlFstnessaawnetlleqllsgLhqqleeLeacleeeaeee 105
                 + ++++ ++ e+a  ++h+ l+ + + Fs ++ sa+ +++  +q+ +++ +ql++  ++ +++ +++
  EPX74647.1   5 KEVKPKSVKGEEAEKMIHDYLRRTNRPFSATDISANLKNAVTKQVAQKILEQLRDSGQIHGKSYGKQ 71 
                 568899999*********************************************9998888776665 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.5
                 HHHHHHHHHHHHHCCS--CCCT--HHHHHHHHHHHHHHHHHHH CS
  Interferon  53 lvlhemlqqifnlFstnessaawnetlleqllsgLhqqleeLe 95 
                  + +++    f++++++ s+a+ ++++  +l + ++q  ++L+
  EPX74647.1 107 KAEYKVKSTEFQILNNSPSPAEIHQKI-STLDKDIEQTKSKLD 148
                 334444455555555555555555443.345555555555554 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.2    0.0065       5.3      18      53 ..      88     123 ..      83     129 .. 0.81
   2 ?    5.6   0.2     0.016        13      21      67 ..     128     172 ..     117     177 .. 0.79

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0065
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-XXX CS
       DivIC  18 aykqlkqeiaalqaelaklkaeneeLeaevkdLksd 53 
                 ++++l+++i++l+ el+++kae +    e + L+++
  EPX74647.1  88 QLMDLDRQIQTLKGELESVKAEYKVKSTEFQILNNS 123
                 678999************999988777777777665 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.016
                 HHHHHHHHHHHHHHHHHHHHHHHHH.HHCC-XXXXXXXXXXXXXXXXX CS
       DivIC  21 qlkqeiaalqaelaklkaeneeLea.evkdLksdedyieerARselgl 67 
                 +++q+i +l +++++ k + + L+a  vk+   +e++ e  A   +++
  EPX74647.1 128 EIHQKISTLDKDIEQTKSKLDCLQAgSVKNV-TEEEMKETLAN--HDF 172
                 6899999999999999999999987457777.69999888886..555 PP

>> YlqD  YlqD protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.1      0.53   4.3e+02       8      27 ..      40      59 ..      34      67 .. 0.79
   2 ?   12.2   2.7   0.00022      0.18      19      87 ..      79     151 ..      70     186 .. 0.67

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.53
        YlqD  8 tVKaivTeklKeelqqqlqa 27
                ++K  vT+++ +++++ql++
  EPX74647.1 40 NLKNAVTKQVAQKILEQLRD 59
                67888999999998888875 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 0.00022
        YlqD  19 eelqqqlqaqieqldkelqqLefqakrlikeikkqsaq........qieeiqeqvekekserlekkkqllqqleqvq 87 
                 + l++  ++q+  ld+++q L+ +++ + +e k +s++        + +e    +++++s + + ++q +++l+ +q
  EPX74647.1  79 DCLEEASSDQLMDLDRQIQTLKGELESVKAEYKVKSTEfqilnnspSPAE----IHQKISTLDKDIEQTKSKLDCLQ 151
                 55677788999999********9999999999999988977744444444....44444444444444433333332 PP

>> Helicase_C_3  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0    0.0008      0.65      57     105 ..      33      79 ..      18     105 .. 0.80
   2 ?   -0.1   0.0       1.1   9.3e+02      72     120 ..     128     175 ..     108     182 .. 0.61

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.0008
  Helicase_C_3  57 taeeiiefLerlskypvPqaleylirdvarryGklrlgleaslvlrsdd 105
                   +a++i + L++  + +v q++ +++rd  + +Gk      +s+++  +d
    EPX74647.1  33 SATDISANLKNAVTKQVAQKILEQLRDSGQIHGKSYGK--QSVYVCLQD 79 
                   7899*********77******************98777..566666543 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 1.1
  Helicase_C_3  72 pvPqaleylirdvarryGklrlgleaslvlrsddpalleelladkkiak 120
                   ++ q++++l +d+ +   kl    +a +v +++++++ e+l++++ ++k
    EPX74647.1 128 EIHQKISTLDKDIEQTKSKLDCL-QAGSVKNVTEEEMKETLANHDFVKK 175
                   33444444434444444444444.6677777777777777777776666 PP

>> PspA_IM30  PspA/IM30 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   6.5     0.006       4.9      94     159 ..     106     171 ..      13     178 .. 0.91

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.006
   PspA_IM30  94 kslekqaealetqlaqqrsaveqlrkqlealetkieelkakkellkarekaakaqeavqkslgkls 159
                 +++e +++  e q  +   + +++ ++++ l++ ie++k+k + l+a +     +e+++++l++ +
  EPX74647.1 106 VKAEYKVKSTEFQILNNSPSPAEIHQKISTLDKDIEQTKSKLDCLQAGSVKNVTEEEMKETLANHD 171
                 456677777777777777888999************************************999876 PP

>> Mnd1  Mnd1 HTH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.2       6.7   5.4e+03      22      33 ..       2      13 ..       1      14 [. 0.85
   2 ?    8.9   0.0    0.0022       1.8       2      58 ..      22      76 ..      21      78 .. 0.90
   3 ?   -0.0   0.1       1.4   1.1e+03      15      37 ..     138     160 ..     135     171 .. 0.59

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 6.7
        Mnd1 22 pkekgivsqsVk 33
                +k+k ++++sVk
  EPX74647.1  2 AKAKEVKPKSVK 13
                688999999998 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0022
        Mnd1  2 leifqeskefytlKeleklapkekgivsqsVkdvlqsLvdDglveveKiGssnvyWs 58
                 ++++ ++ +++  ++   ++    +++q  + +l++L d g ++ +  G + vy +
  EPX74647.1 22 HDYLRRTNRPFSATDISANLKN--AVTKQVAQKILEQLRDSGQIHGKSYGKQSVYVC 76
                577899999********99998..899***********************9999966 PP

  == domain 3  score: -0.0 bits;  conditional E-value: 1.4
        Mnd1  15 KeleklapkekgivsqsVkdvlq 37 
                 K++e+  +k    ++ sVk v +
  EPX74647.1 138 KDIEQTKSKLDCLQAGSVKNVTE 160
                 66666666655555666665544 PP

>> LPP  Lipoprotein leucine-zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.2     0.011       9.3       6      30 ..      86     110 ..      83     118 .. 0.72
   2 ?    4.6   0.2     0.054        44       5      28 ..     129     152 ..     127     164 .. 0.68

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.011
         LPP   6 ssqVsqLkskvdqlssdvnsakaaa 30 
                 s+q+ +L ++++ l+ +++s+ka+ 
  EPX74647.1  86 SDQLMDLDRQIQTLKGELESVKAEY 110
                 6677778888888887777777654 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.054
         LPP   5 LssqVsqLkskvdqlssdvnsaka 28 
                 + + +s+L ++++q +s+++ ++a
  EPX74647.1 129 IHQKISTLDKDIEQTKSKLDCLQA 152
                 566788888888888888776665 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       7.4     6e+03      65      71 ..      46      52 ..      11      72 .. 0.60
   2 ?    5.3   0.3     0.037        30       7      39 ..      86     118 ..      81     123 .. 0.77
   3 ?    7.1   0.1      0.01       8.5       5      48 ..     128     172 ..     125     206 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 7.4
                XXXXXXX CS
        YabA 65 elsegke 71
                +++ +++
  EPX74647.1 46 TKQVAQK 52
                2222233 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.037
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        YabA   7 fdkleeleeqleelleeleelkeelaelleena 39 
                  d+l++l++q+++l+ ele++k+e +    e +
  EPX74647.1  86 SDQLMDLDRQIQTLKGELESVKAEYKVKSTEFQ 118
                 578999999999999999999998876666655 PP

  == domain 3  score: 7.1 bits;  conditional E-value: 0.01
                 HHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHHH CS
        YabA   5 elfdkleeleeqleelleeleelke.elaelleenaeLelenekl 48 
                 e+ +k+++l++++e+++++l+ l++ ++++++ee+ + +l n+ +
  EPX74647.1 128 EIHQKISTLDKDIEQTKSKLDCLQAgSVKNVTEEEMKETLANHDF 172
                 79999******************9835677777777766666655 PP

>> Mod_r  Modifier of rudimentary (Mod(r)) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.51   4.1e+02      88     107 ..      25      48 ..       3      64 .. 0.73
   2 ?    8.4   5.2    0.0026       2.1      53     140 ..      86     185 ..      70     187 .. 0.71

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.51
       Mod_r  88 l....qkfspdallarLqtavaea 107
                 l    ++fs   + a+L++av+++
  EPX74647.1  25 LrrtnRPFSATDISANLKNAVTKQ 48 
                 334448999999999999999875 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.0026
       Mod_r  53 epeleelrselqekleelkelekefeekeqeldellqkfspdallarLqtavaeaeeeSeal...aeefle.......ge.ieldeFvke.fkekRkly 139
                  ++l +l  ++q    el+++++e++ k +e + l ++ sp+ + ++  t  +++e+   +l   +   ++       +e     +Fvk+ +++ Rk +
  EPX74647.1  86 SDQLMDLDRQIQTLKGELESVKAEYKVKSTEFQILNNSPSPAEIHQKISTLDKDIEQTKSKLdclQAGSVKnvteeemKEtLANHDFVKKgYLQRRKMF 184
                 569****************************************99997766666665444420003333325655443111333567765577777777 PP

       Mod_r 140 H 140
                 +
  EPX74647.1 185 Y 185
                 6 PP

>> Rx_N  Rx N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.2    0.0024         2       9      39 ..      77     108 ..      71     123 .. 0.84
   2 ?    2.3   0.1      0.26   2.1e+02      18      46 ..     131     160 ..     117     195 .. 0.75

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0024
        Rx_N   9 Ladllaeea.kllkgvkeeleklkdeLesiqa 39 
                 L d l+e    +l++++++++ lk eLes++a
  EPX74647.1  77 LQDCLEEASsDQLMDLDRQIQTLKGELESVKA 108
                 5666666667899*****************98 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.26
        Rx_N  18 kllkgvkeeleklkdeLesiqa.vLedaee 46 
                 +++  +++++e+ k++L  +qa  ++ + e
  EPX74647.1 131 QKISTLDKDIEQTKSKLDCLQAgSVKNVTE 160
                 77888999*********9999844444444 PP

>> GrpE  GrpE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1       3.6   2.9e+03      50      50 ..      39      39 ..       5      60 .. 0.51
   2 ?    5.9   0.4     0.011         9       7      43 ..      82     118 ..      78     123 .. 0.85
   3 ?    7.1   0.5    0.0048       3.9      12      64 ..     124     177 ..     118     181 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 3.6
                H CS
        GrpE 50 e 50
                +
  EPX74647.1 39 A 39
                2 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.011
                 CTTTHHHHCCCCCCTTCHHHCTTSCCCCCCTTTTTTT CS
        GrpE   7 eeeeedeeeeleeeleelekevkelkekllrllaefe 43 
                 ee+  d++ +l++++++l+ e++++k +++ +  ef+
  EPX74647.1  82 EEASSDQLMDLDRQIQTLKGELESVKAEYKVKSTEFQ 118
                 5678899999999999999999999999999999988 PP

  == domain 3  score: 7.1 bits;  conditional E-value: 0.0048
                 HHHCCCCCCTTCHHHCTTSCCCCCCTTTT.TTTTHHHHHHHHHHHHHHHHHHHH CS
        GrpE  12 deeeeleeeleelekevkelkekllrlla.efenlrkrtekekeeakkfaiekf 64 
                 +  +e  +++++l+k +++ k+kl+ l+a  ++n+++   ke  + ++f ++  
  EPX74647.1 124 PSPAEIHQKISTLDKDIEQTKSKLDCLQAgSVKNVTEEEMKETLANHDFVKKGY 177
                 566788999****************99883566**********99999988765 PP

>> DUF4094  Domain of unknown function (DUF4094)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.4     0.089        73      65      87 ..      86     108 ..      28     109 .. 0.78
   2 ?    6.1   0.3     0.018        15      64      82 ..     129     147 ..     110     153 .. 0.85
   3 ?   -2.0   0.1         6   4.9e+03      44      68 ..     148     173 ..     142     180 .. 0.62

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.089
     DUF4094  65 hkaiqtLdktissLemeLaaara 87 
                 ++ +  Ld++i +L  eL++ +a
  EPX74647.1  86 SDQLMDLDRQIQTLKGELESVKA 108
                 3457799***********98887 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.018
     DUF4094  64 thkaiqtLdktissLemeL 82 
                  h+ i+tLdk i +   +L
  EPX74647.1 129 IHQKISTLDKDIEQTKSKL 147
                 69**********9998888 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 6
     DUF4094  44 dcds.kdaesrskdilgevskthkai 68 
                 dc +   +++ ++++++e+   h+ +
  EPX74647.1 148 DCLQaGSVKNVTEEEMKETLANHDFV 173
                 56655334444557777777777655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1445  (0.0805957); expected 358.6 (0.02)
Passed bias filter:                      664  (0.037035); expected 358.6 (0.02)
Passed Vit filter:                        88  (0.00490825); expected 17.9 (0.001)
Passed Fwd filter:                        22  (0.00122706); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              22  [number of targets reported over threshold]
# CPU time: 0.56u 0.29s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 1479.76
//
Query:       EPX74648.1  [L=337]
Description: COP9/signalosome complex subunit Csn3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        0.1   13.0   0.0       0.25   11.7   0.0    1.6  1  DUF1871   Domain of unknown function (DUF1871)


Domain annotation for each model (and alignments):
>> DUF1871  Domain of unknown function (DUF1871)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.4e-05      0.25      29      67 ..     265     305 ..     260     314 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.4e-05
                 HHTT-S-HHHHHHHHHHHHHHHHSS---..HHHHHHHHHHH CS
     DUF1871  29 avyelddpkklakkiqeiyevsFeqlip..leeCkklaekL 67 
                  v + dd +kl ++    y+v F++l p  l+eCk+l+ekL
  EPX74648.1 265 IVRKYDDKSKLVQNAEGEYFVMFDSLAPvnLDECKELSEKL 305
                 68999********************9874478*******98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (337 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       648  (0.0361426); expected 358.6 (0.02)
Passed bias filter:                      521  (0.0290591); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.22s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2605.52
//
Query:       EPX74649.1  [L=476]
Description: hypothetical protein SOCG_02132 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (476 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       402  (0.0224218); expected 358.6 (0.02)
Passed bias filter:                      222  (0.0123822); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 3511.80
//
Query:       EPX74650.1  [L=567]
Description: poly(A) polymerase Cid13 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.3e-17   63.7   0.6    6.8e-17   61.4   0.4    2.3  2  PAP_assoc     Cid1 family poly A polymerase
    1.4e-07   31.7   0.0    2.8e-07   30.8   0.0    1.5  1  NTP_transf_2  Nucleotidyltransferase domain
    7.2e-05   22.8   0.0    0.00014   21.8   0.0    1.5  1  Polbeta       Polymerase beta, Nucleotidyltransferase


Domain annotation for each model (and alignments):
>> PAP_assoc  Cid1 family poly A polymerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.4   0.4   1.1e-20   6.8e-17       1      61 [.     275     330 ..     275     331 .. 0.94
   2 ?   -1.1   0.0      0.39   2.4e+03      14      30 ..     518     534 ..     518     550 .. 0.79

  Alignments for each domain:
  == domain 1  score: 61.4 bits;  conditional E-value: 1.1e-20
                 -HHHHHHHHHHHHHHT--TTTEEEECSST-EEEHHHHCGCS-SSEECESSSSEBEETTCCC CS
   PAP_assoc   1 sLGeLLigFFeyYgreFdyenvvisirtggiltkkekgwesaeskernrfllaIeDPfeld 61 
                 sLG+L+i+FF+++g+ Fdy+++vis+r+g il+k+ kgw+      +  + l++e+Pf ++
  EPX74650.1 275 SLGTLFIEFFRFFGYLFDYDHSVISVRHGTILSKRAKGWQF-----QLNNCLCVEEPFRNS 330
                 79**************************************5.....5779********876 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.39
                 HHT--TTTEEEECSST- CS
   PAP_assoc  14 greFdyenvvisirtgg 30 
                 g+ F+++ ++i ++ ++
  EPX74650.1 518 GESFNFTSDAIHMSSKD 534
                 789********987654 PP

>> NTP_transf_2  Nucleotidyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   0.0   4.6e-11   2.8e-07       1      49 [.      76     154 ..      76     200 .. 0.74

  Alignments for each domain:
  == domain 1  score: 30.8 bits;  conditional E-value: 4.6e-11
                   HHHHHHHHHHHTT..TSEEEEEHHHHCTTSCTTSSEEEEEEESTTCHHH............................HH CS
  NTP_transf_2   1 lkklleelkelep..vakvvlfGSyarGtalkgSDiDllvvlpeevsre............................kk 49 
                   ++kl  +l++++p  ++k+vlfGS++  +a k  DiDl++ ++++ + +                            k+
    EPX74650.1  76 VRKLESILQKKWPekNIKAVLFGSTESLLADKHADIDLCISTDSSQPAPttceissafaesglekvvciasakvpivKV 154
                   6899*****************************************7777******995555555444444444444433 PP

>> Polbeta  Polymerase beta, Nucleotidyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.0   2.4e-08   0.00014       2      58 ..      78     136 ..      77     154 .. 0.86

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 2.4e-08
                 STTTTHHHH..HHHHSTTEEEEEE-S------EEEEEEEESS---HHHHHHHHHHHHHH CS
     Polbeta   2 kikeileke..keielaylFGSrakgkareeSDiDlavllkekldleeelelaaeledi 58 
                 k+++il+k+  ++ + a+lFGS  +  a ++ DiDl++ +++++   + +e+++++++ 
  EPX74650.1  78 KLESILQKKwpEKNIKAVLFGSTESLLADKHADIDLCISTDSSQPAPTTCEISSAFAES 136
                 899999999886777899*************************999999*999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (567 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       476  (0.0265492); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.40
# Mc/sec: 4274.10
//
Query:       EPX74651.1  [L=358]
Description: translation initiation factor eIF3h [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.4e-07   30.3   0.0    6.9e-07   29.3   0.0    1.5  1  JAB       JAB1/Mov34/MPN/PAD-1 ubiquitin protease
  ------ inclusion threshold ------
       0.17   11.8   1.6       0.44   10.4   1.6    1.6  1  Dec-1     Dec-1 repeat


Domain annotation for each model (and alignments):
>> JAB  JAB1/Mov34/MPN/PAD-1 ubiquitin protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.3   0.0   7.7e-11   6.9e-07       4     118 .]      18     135 ..      15     135 .. 0.84

  Alignments for each domain:
  == domain 1  score: 29.3 bits;  conditional E-value: 7.7e-11
                 CEEEEEHHHHHHHHHHHHHHHHHTS--EEEEEEEESSSEEEEEEEEEEESEEEESSECEEEEEHHHHHHHHHHHHHHHC....TT.SEEEEEEEESSSS CS
         JAB   4 qavhleslvllkildhalrtekeeeevmGlliGelnddttveitnvfalpfeetekdvdavsldqeylekksellkklr....gr.ervvGWYhshpdi 97 
                 + v les  +++i++h +    +   ++G l+G   d  ++++ n+f+ p   ++++  +++ +    +++++++   r    g    +vGWY+ +   
  EPX74651.1  18 ERVELESMLVMNIIKHCRDSFPN-VGTIGQLVGIDIDG-VLQVSNSFESPAVLENEESAVNKSVSGKARQAHTEATLNRmqylGAvTGHVGWYQGTYVG 114
                 789****************9999.99*******99999.*********9988777776666665554555555555544778866699*********** PP

                 -SS--HHHHHHHHHHHHHSTT CS
         JAB  98 tvwlsevdvrtqalyqrmdee 118
                 +   s+  v+tq +yq+ +++
  EPX74651.1 115 DFLNSSFFVDTQYAYQKENPN 135
                 99***************9985 PP

>> Dec-1  Dec-1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.6   4.9e-05      0.44       8      20 ..     272     284 ..     267     289 .. 0.94

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 4.9e-05
       Dec-1   8 qRQWsEDQAKiqQ 20 
                 qRQ + +QAKiqQ
  EPX74651.1 272 QRQLAREQAKIQQ 284
                 9***********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       566  (0.031569); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 2793.42
//
Query:       EPX74652.1  [L=331]
Description: septin Spn2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.3e-112  375.7   1.1   1.6e-112  375.4   1.1    1.0  1  Septin           Septin
    7.2e-10   39.0   0.0    1.7e-09   37.8   0.0    1.6  1  MMR_HSR1         50S ribosome-binding GTPase
    6.9e-07   29.0   0.1     0.0001   21.9   0.0    2.2  2  GTP_EFTU         Elongation factor Tu GTP binding domain
    2.8e-06   27.8   0.1    1.6e-05   25.4   0.1    2.1  1  AAA_16           AAA ATPase domain
    7.3e-06   26.0   0.3    5.1e-05   23.2   0.1    2.1  2  RsgA_GTPase      RsgA GTPase
    2.1e-05   25.1   0.2    4.9e-05   23.9   0.2    1.6  1  ABC_tran         ABC transporter
      4e-05   23.7   1.4      0.048   13.7   0.3    2.5  2  Dynamin_N        Dynamin family
    7.6e-05   22.1   0.0    0.00014   21.3   0.0    1.4  1  AIG1             AIG1 family
    0.00013   21.4   0.2     0.0025   17.2   0.0    2.2  2  Gtr1_RagA        Gtr1/RagA G protein conserved region
    0.00038   20.5   0.1     0.0012   18.8   0.0    1.9  1  AAA_14           AAA domain
    0.00047   19.9   0.0    0.00083   19.0   0.0    1.4  1  AAA_29           P-loop containing region of AAA domain
    0.00055   19.4   0.0    0.00099   18.5   0.0    1.4  1  FtsK_SpoIIIE     FtsK/SpoIIIE family
    0.00064   18.9   0.0     0.0011   18.1   0.0    1.4  1  T2SSE            Type II/IV secretion system protein
     0.0015   18.8   0.0     0.0042   17.4   0.0    1.7  1  AAA_22           AAA domain
     0.0017   18.6   0.0     0.0033   17.6   0.0    1.5  1  Roc              Ras of Complex, Roc, domain of DAPkinase
     0.0019   18.8   0.6      0.024   15.2   0.0    2.4  2  AAA_18           AAA domain
     0.0022   18.2   0.0      0.004   17.3   0.0    1.6  1  AAA_33           AAA domain
     0.0024   17.1   0.2     0.0053   16.0   0.2    1.5  1  G-alpha          G-protein alpha subunit
      0.003   17.1   0.5     0.0085   15.6   0.1    1.9  2  AAA_7            P-loop containing dynein motor region
     0.0032   17.7   0.1       0.25   11.6   0.0    2.4  2  AAA_28           AAA domain
     0.0035   16.6   0.0     0.0054   15.9   0.0    1.4  1  NB-ARC           NB-ARC domain
     0.0068   15.8   0.2      0.035   13.5   0.0    2.1  2  SRPRB            Signal recognition particle receptor beta su
     0.0071   16.7   0.0      0.015   15.7   0.0    1.6  1  RNA_helicase     RNA helicase
  ------ inclusion threshold ------
      0.012   15.4   0.1      0.075   12.8   0.1    2.2  2  ATP_bind_1       Conserved hypothetical ATP binding protein
      0.013   14.8   0.0       0.03   13.6   0.0    1.6  1  GBP              Guanylate-binding protein, N-terminal domain
      0.015   15.3   0.0      0.028   14.4   0.0    1.4  1  AAA_5            AAA domain (dynein-related subfamily)
      0.018   15.5   0.3       0.03   14.8   0.3    1.7  1  AAA_23           AAA domain
      0.038   13.2   0.0      0.062   12.5   0.0    1.4  1  DUF815           Protein of unknown function (DUF815)
      0.042   13.6   0.1       0.28   10.9   0.1    2.3  1  PduV-EutP        Ethanolamine utilisation - propanediol utili
      0.046   13.4   0.0       0.18   11.5   0.0    2.0  2  Guanylate_kin    Guanylate kinase
      0.046   13.3   0.0       0.12   11.9   0.0    1.8  2  cobW             CobW/HypB/UreG, nucleotide-binding domain
      0.047   13.6   0.0       0.11   12.4   0.0    1.7  1  ATPase_2         ATPase domain predominantly from Archaea
      0.061   13.0   0.0       0.16   11.7   0.0    1.7  1  AAA_24           AAA domain
      0.076   11.8   0.0       0.15   10.8   0.0    1.5  1  Adeno_IVa2       Adenovirus IVa2 protein
      0.077   12.0   0.4       0.17   10.9   0.1    1.7  2  IIGP             Interferon-inducible GTPase (IIGP)
      0.091   12.5   0.0       0.15   11.7   0.0    1.3  1  AAA_30           AAA domain
      0.098   12.1   0.3        0.2   11.0   0.3    1.6  1  SMC_N            RecF/RecN/SMC N terminal domain
        0.1   12.3   0.0       0.17   11.5   0.0    1.3  1  Sigma54_activat  Sigma-54 interaction domain
        0.1   12.2   0.0       0.28   10.8   0.0    1.7  1  Ras              Ras family
       0.12   12.5   0.1       0.29   11.3   0.1    1.6  1  DUF1542          Domain of Unknown Function (DUF1542)
       0.14   12.1   0.0       0.27   11.2   0.0    1.4  1  NACHT            NACHT domain


Domain annotation for each model (and alignments):
>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  375.4   1.1  3.5e-115  1.6e-112       1     278 [.      29     305 ..      29     308 .. 0.98

  Alignments for each domain:
  == domain 1  score: 375.4 bits;  conditional E-value: 3.5e-115
                 XEEEEEEEEEEBTTSSCCCCCCTTSSSS------------------S-EEEEEEEEETTCEEEEEEEE---BSSSSSHHCCCHHHHHHHHHHHHHHHHH CS
      Septin   1 kgieftlmvvGesglGkttlintlfetdlieeekleeasekkkktveikkkkvvieedgvklnltviDtpgfGdavdnskswepiveyideqfeeylre 99 
                 +g++f++mvvG sg Gk+tl+ntlf+ +l++++   + +   ++t+ei+ +++v++e+ v+l+l++iDtpg+Gd+++n+k+wepi++yi++q+++ylr+
  EPX74652.1  29 RGFQFNVMVVGPSGSGKSTLVNTLFSAHLMNSKGRVDIQTPYRQTTEINVTSHVVQENRVQLQLNLIDTPGYGDQINNDKCWEPIIKYIRDQHSSYLRR 127
                 69**********************************9*9************************************************************ PP

                 CTSS--.SS-----EEEEEEEE-TTSSSS-HHHHHHHHHHTTTS-EEEEESSGGGS-HHHHHHHHHHHHHHHHHTT--------SSSS-SCCHHHHHHH CS
      Septin 100 esklkR.kkivDkRvHaclyfisPtghglkpldvelmkklsekvnliPviaKaDtltkeElkefKkkireeleeeeikiyklpdeeededeeakelsek 197
                 e + +R k+++D+RvH+cl+fi+Ptgh l+p+d++++k+l+e vn++PviaK+D+lt eE  +fK++iree+++++i++y  +d+++ +dee  +l+ +
  EPX74652.1 128 ELNSHReKRLQDTRVHCCLFFIRPTGHSLRPIDIAVLKRLTEIVNVVPVIAKSDSLTLEERAAFKQQIREEITKHDINLYP-YDSDDIDDEE-LNLNAA 224
                 ******999************************************************************************.******9999.99**** PP

                 HHHC-SEEB-SSSSEEEESSSEEEEEEETTEEEETT-TTT-SCCHHHHHHHHHCHHHHHHHHHHTHHHHHHHHHH-XXXXX CS
      Septin 198 lkeslPfaivgsneliekkgkkvrgRkypWGvvevenekhsdFlkLrklllkthledLkevteellYetyRseklsklkek 278
                 +++ +Pfa+vgs+++i  +gk++rgR+ +WG+v+v++e+h++F+ Lr++l++thl+dL+e+t+  +Ye++Rs++ls+lke+
  EPX74652.1 225 VRNLIPFAVVGSEKEIVVDGKHIRGRQNRWGIVNVDDENHCEFIYLRNFLMRTHLQDLIETTSVYHYERFRSKQLSTLKEQ 305
                 ****************************************************************************99876 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.8   0.0   3.8e-12   1.7e-09       1     101 [.      34     167 ..      34     181 .. 0.56

  Alignments for each domain:
  == domain 1  score: 37.8 bits;  conditional E-value: 3.8e-12
                 EEEEEESTTSSHHHHHHHHHT........STEEESSSTTSSSSEEEEEEE.ETT..EEEEEEECGGC................SSHHHHHHH....... CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltg........ekaivsdkpgtTrdinegrvk.lkg..keielvDtpGl................iegaseekg....... 65 
                 +v++vG + +GKStL+n+l+         ++ i + + +tT   ++ +v  +++   +++l+DtpG                 i       +       
  EPX74652.1  34 NVMVVGPSGSGKSTLVNTLFSahlmnskgRVDIQTPYRQTTEINVTSHVVqENRvqLQLNLIDTPGYgdqinndkcwepiikyI-------Rdqhssyl 125
                 599****************9544444322244667777777666555554233233679*******544444444444443321.......02222222 PP

                 ......HHHHHHHHHCTSEEEEEEETTTTCSHHHHHHHHHHH CS
    MMR_HSR1  66 ......lgkaflaleeadlillvvdaseeklkpldeeleell 101
                        +++ l+  +++  l+ ++ + ++l+p+d  + + l
  EPX74652.1 126 rrelnsHREKRLQDTRVHCCLFFIRPTGHSLRPIDIAVLKRL 167
                 222111333333344466677777645456777777766665 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.0   2.3e-07    0.0001       5      82 ..      34     102 ..      32     107 .. 0.83
   2 ?    5.1   0.0     0.034        15     119     165 ..     167     212 ..     158     292 .. 0.72

  Alignments for each domain:
  == domain 1  score: 21.9 bits;  conditional E-value: 2.3e-07
                 EEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHHHHHSTHCHSHHHHHHTSCSSCEEEEEETTCSSEEEEEEEESSSGG CS
    GTP_EFTU   5 nigiighvDhGKtTLtdrLlyktgaiskkgekaeeervlDtlkeErergiTiksaaisleketkkylinliDtPGHvd 82 
                 n++++g   +GK+TL+ +L  ++ + sk g+++       +++  +   i ++s++++ +    + ++nliDtPG  d
  EPX74652.1  34 NVMVVGPSGSGKSTLVNTLFSAHLMNSK-GRVDI------QTPYRQTTEINVTSHVVQEN--RVQLQLNLIDTPGYGD 102
                 99*****************987777666.44442......47888889999999999988..99***********876 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.034
                 HHTTTEEEEEEESCGST.HHHHHHHHHHHHHHHHHHHHHHHHHHHTTT CS
    GTP_EFTU 119 lkegvpiivfiNKmDrl.kaelkeiveevkqklsrkeeklekygekge 165
                 l+e v+++ +i K D l  +e    ++++++++  ++++++ y+++++
  EPX74652.1 167 LTEIVNVVPVIAKSDSLtLEERAAFKQQIREEI--TKHDINLYPYDSD 212
                 567789***********8777788888888888..4445555555544 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.1   3.6e-08   1.6e-05      19      75 ..      27      76 ..      12     246 .. 0.80

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 3.6e-08
      AAA_16 19 vrsgrpelvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipysalaqa 75
                vr+g   +v+++G+sG+GKs+lv++l+ a   +     +g+ d     +py + +++
  EPX74652.1 27 VRRGFQFNVMVVGPSGSGKSTLVNTLFSAHLMN----SKGRVDIQ---TPYRQTTEI 76
                455555689******************877666....56666666...666444443 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.1   1.2e-07   5.1e-05     101     161 ..      34     100 ..      11     103 .. 0.65
   2 ?    0.2   0.0       1.4     6e+02      45      80 ..     169     207 ..     153     233 .. 0.69

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 1.2e-07
                  EEEEECSTTSSHHHHHHHHCTT-.----S--------------.SEEEEEETT.....TEEEESS-SS CS
  RsgA_GTPase 101 tsvlvGqSGvGKStLinallpel.elktgevseklgrGkhTTt.avellelae.....gglliDtPGf 161
                   +++vG+SG GKStL+n+l + +   + g v  ++   + TT  +v+ + ++e     +  liDtPG 
   EPX74652.1  34 NVMVVGPSGSGKSTLVNTLFSAHlMNSKGRVDIQTPY-RQTTEiNVTSHVVQEnrvqlQLNLIDTPGY 100
                  46789***************96414444555554444.444431444444444444446789999995 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 1.4
                  TT-EEEEEEE-GGG--HHH...HHHHHHHHHHHTTSEEE CS
  RsgA_GTPase  45 kgiepvivlnKiDlleeee...eleelkeelealgyevl 80 
                  + +++v v+ K D l+ ee     ++++ee+++ +++++
   EPX74652.1 169 EIVNVVPVIAKSDSLTLEEraaFKQQIREEITKHDINLY 207
                  4567888999***99988855434455555555555555 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.2   1.1e-07   4.9e-05      14      73 ..      35      91 ..      32     144 .. 0.61

  Alignments for each domain:
  == domain 1  score: 23.9 bits;  conditional E-value: 1.1e-07
                EEEEESTTSSHHHHHHHH.TTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TT CS
                xxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 14 vaivGenGaGKStLlkll.agllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpe 73
                v +vG++G+GKStL+++l + +l + +G++ ++ ++   +++++ +  + v++++ +++ +
  EPX74652.1 35 VMVVGPSGSGKSTLVNTLfSAHLMNSKGRVDIQ-TPY--RQTTEINVTSHVVQEN-RVQLQ 91
                789************98725567789****554.222..2334444444444443.33333 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.3   0.00011     0.048       1      26 [.      35      59 ..      35      66 .. 0.85
   2 !    8.4   0.0    0.0046         2      99     127 ..      88     119 ..      65     125 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 0.00011
                EEEEEBTTTTHHHHHHHHHTS--S-- CS
   Dynamin_N  1 iavvGsqSsGKSSvlnaLlgedilpr 26
                ++vvG   sGKS+++n L  ++++ +
  EPX74652.1 35 VMVVGPSGSGKSTLVNTLFSAHLM-N 59
                79****************999944.4 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.0046
                 TS-SEEEEE---B-SSSGTTS..HHHHHHH.S CS
   Dynamin_N  99 lvkgltlvDlPGldsvnkrdq..elvkeyi.k 127
                  + +l+l+D+PG+ ++ ++d+  e + +yi +
  EPX74652.1  88 VQLQLNLIDTPGYGDQINNDKcwEPIIKYIrD 119
                 56789**********99999888888888843 PP

>> AIG1  AIG1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.0   3.2e-07   0.00014       2      69 ..      34     109 ..      33     122 .. 0.65

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 3.2e-07
                 EEEEESSTTSSHHHHHHHHHTS--SS--TT.........TS---SS-EEEEEEETTEEEEEEE--SCCCTTCCHHCH CS
        AIG1   2 tivlvGktgnGkSaTgNsilgkkaFeskls.........aqsvtkkcqkksrtwdgkkinViDTPglfdlsvsadki 69 
                 ++++vG +g+GkS+ +N++   +  +sk +         ++++  +++ +++ + + ++n iDTPg  d   ++dk+
  EPX74652.1  34 NVMVVGPSGSGKSTLVNTLFSAHLMNSKGRvdiqtpyrqTTEINVTSHVVQENRVQLQLNLIDTPGYGDQI-NNDKC 109
                 799****************9999988876511111111123344444444455566899*******87754.34444 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   5.6e-06    0.0025       2      64 ..      35     106 ..      34     119 .. 0.75
   2 ?    1.9   0.1      0.28   1.2e+02     106     143 ..     165     202 ..     159     222 .. 0.83

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 5.6e-06
   Gtr1_RagA   2 vLLmGksgsGKtsmrsiiFdnylardtlrlgati........dveksevr.flgnltlnlwDcgGqeafvee 64 
                 v+ +G+sgsGK+++ + +F+  l +   r+ + +        +v+ + v+ +  +l+lnl+D +G  + +++
  EPX74652.1  35 VMVVGPSGSGKSTLVNTLFSAHLMNSKGRVDIQTpyrqtteiNVTSHVVQeNRVQLQLNLIDTPGYGDQINN 106
                 899*****************9999988888765555555554333333321334689********9887766 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.28
   Gtr1_RagA 106 rqyspeakvfvlihKmDliqedereeifeerkeeiree 143
                 ++  + ++v   i K D ++ +er+   ++++eei+++
  EPX74652.1 165 KRLTEIVNVVPVIAKSDSLTLEERAAFKQQIREEITKH 202
                 5556667788899**************99999999875 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   2.8e-06    0.0012       5      90 ..      35     121 ..      32     139 .. 0.70

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 2.8e-06
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpe.....kllelileklkeekktylflDEiqevpewekalkslvdeg 90 
                 ++++G+  +GK+tl+++l++ +l++++  + i+    ++++++ ++     +  +l l+++    +t  + D i + ++we ++k++ d++
  EPX74652.1  35 VMVVGPSGSGKSTLVNTLFSAHLMNSKGRVDIQTPYRQTTEINVTShvvqeNRVQLQLNLI----DTPGYGDQINNDKCWEPIIKYIRDQH 121
                 6899*******************66666666666666665555433222111112222222....2334569***************9987 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.0   1.9e-06   0.00083      23      41 ..      30      51 ..       5      63 .. 0.75

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 1.9e-06
      AAA_29 23 g...atlltGpsGsGKSTllDA 41
                g   +++++GpsGsGKSTl+  
  EPX74652.1 30 GfqfNVMVVGPSGSGKSTLVNT 51
                4445799************955 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   2.3e-06   0.00099      40      67 ..      33      59 ..       4      82 .. 0.73

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 2.3e-06
                  .SEEEE--TTSSHHHHHHHHHHHHHTT- CS
  FtsK_SpoIIIE 40 shllvaGatgsGKStalntLilSlatth 67
                   +++v+G +gsGKSt +ntL  +  +++
    EPX74652.1 33 FNVMVVGPSGSGKSTLVNTLFSA-HLMN 59
                  69*****************9644.4444 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   2.4e-06    0.0011     100     151 ..       4      54 ..       1      91 [. 0.83

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 2.4e-06
       T2SSE 100 akeltlddlgaeealkekiaevlrkavrerglilvsGgTgsGKttllyallk 151
                 ++++ l++++   + + +i++ l +    + +++v G+ gsGK+tl+++l +
  EPX74652.1   4 PESIPLNNYVGFDSITSQINRKLVRR-GFQFNVMVVGPSGSGKSTLVNTLFS 54 
                 56788899999999999998877776.689******************9875 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   9.6e-06    0.0042       8      52 ..      35      83 ..      32     129 .. 0.64

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 9.6e-06
      AAA_22  8 lvvtGesGtGKTtllrrlleqldeeakaee......erpevvfvtlpssts 52
                ++v+G+sG+GK+tl+++l++ +   +k         + +++ +++++s   
  EPX74652.1 35 VMVVGPSGSGKSTLVNTLFSAHLMNSK--GrvdiqtPYRQTTEINVTSHVV 83
                589****************99854333..1346665555555666666554 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   7.6e-06    0.0033       2      65 ..      35      99 ..      34     109 .. 0.70

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 7.6e-06
                EEEESSTTSSHHHHHHCHCT-CC.C-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-S CS
         Roc  2 vvlvGdsgvGKtsllkrfvedkf.sekekstigvdfltkevtkikgvendkkvkkvklniWDtaG 65
                v++vG sg+GK++l++ + + +  ++k +  i+  + +++  ++++   +++  +++ln+ Dt G
  EPX74652.1 35 VMVVGPSGSGKSTLVNTLFSAHLmNSKGRVDIQTPYRQTTEINVTSHVVQENRVQLQLNLIDTPG 99
                89***************999877244445556666655443344433344445569999999987 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   5.5e-05     0.024       1      63 [.      35      93 ..      35     150 .. 0.54
   2 ?    1.7   0.1      0.83   3.6e+02      31      93 ..     198     256 ..     172     282 .. 0.63

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 5.5e-05
      AAA_18  1 IlltGtpGvGKttlakeL.skrl.gf..............gvnlrdvakenglllevdpealdeskrldedkldkllda 63
                +++ G++G+GK+tl + L s +l ++                            +       + +  ++++++ +l+ +
  EPX74652.1 35 VMVVGPSGSGKSTLVNTLfSAHLmNSkgrvdiqtpyrqttE-------------I-------NVTSHVVQENRVQLQLN 93
                799***************76665344533222222222221.............2.......23333333333333333 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.83
      AAA_18  31 vakenglllevdpealdeskrldedkldklldaleenssaleegknlvidghlaeleseaakd 93 
                  ++++++ l+  +   d+ + ++ +  ++++++l   +   +++k +v+dg +   ++ ++ +
  EPX74652.1 198 EITKHDINLYPYDS--DDIDDEELNL-NAAVRNLIPFA-VVGSEKEIVVDGKHIRGRQNRWGI 256
                 44443333332222..3444444444.45666666665.489999999999887777777765 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   9.1e-06     0.004       2      23 ..      35      56 ..      35     133 .. 0.89

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 9.1e-06
      AAA_33  2 vllvGlpGsGKstlaerllkkl 23
                v++vG++GsGKstl+  l  ++
  EPX74652.1 35 VMVVGPSGSGKSTLVNTLFSAH 56
                89*************9997654 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.2   1.2e-05    0.0053      12      77 ..      23      97 ..      15     214 .. 0.54

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.2e-05
                XXXXXXXXE..EEEEEEEESTTSSHHHHHHHHHHHC.S--.........--HHHHHC.CHHHHHHHHHHHHHHHHHH CS
     G-alpha 12 kaerkarkkkrevkllllGqseSGKsTilkqlklly.kkg.........fseeelat.wraviqlnivrsiktilea 77
                +++    ++ ++++++++G s+SGKsT+++ l   + +++         +++    +    v+q+n v+   +++++
  EPX74652.1 23 NRK--LVRRGFQFNVMVVGPSGSGKSTLVNTLFSAHlMNSkgrvdiqtpYRQTTEINvTSHVVQENRVQLQLNLIDT 97
                333..22335689*****************99855543332255544443322222224446666655544444433 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.1   1.9e-05    0.0085      33      61 ..      32      61 ..      18      88 .. 0.70
   2 ?   -2.5   0.0       7.2   3.2e+03     126     155 ..     114     146 ..     111     173 .. 0.66

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 1.9e-05
       AAA_7 33 kkpvllvGptGtGKtviikd.llkkldkek 61
                + +v++vGp+G+GK++++++ +  +l ++k
  EPX74652.1 32 QFNVMVVGPSGSGKSTLVNTlFSAHLMNSK 61
                468*****************6555555433 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 7.2
       AAA_7 126 lRqlldyggwYdrkkl...efkeikdvqlvaam 155
                 ++ + d++  Y r++l     k+++d+ + ++ 
  EPX74652.1 114 IKYIRDQHSSYLRRELnshREKRLQDTRVHCCL 146
                 566667777777766532244578888877774 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.0   0.00057      0.25       2      21 ..      35      54 ..      34      96 .. 0.77
   2 ?    3.9   0.1      0.13        57     129     160 ..     183     214 ..     113     216 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00057
      AAA_28  2 ivitGgestGKTtlleaLaa 21
                ++++G++++GK+tl++ L +
  EPX74652.1 35 VMVVGPSGSGKSTLVNTLFS 54
                899*************9984 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.13
      AAA_28 129 edleereaiderlrealrelgipviivpsgdv 160
                  +leer+a+++++re  ++++i+++   s d+
  EPX74652.1 183 LTLEERAAFKQQIREEITKHDINLYPYDSDDI 214
                 4789******************9988766665 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   1.2e-05    0.0054       6      45 ..      20      57 ..      16     125 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 1.2e-05
                HHHHHHHHCTTTSCSEEEEEEESTTSSHHHHHHHHCCSHC CS
      NB-ARC  6 ekviekLlekdelqslvvalvGmgGvGKttlakqilnksd 45
                 ++  kL+   ++q + v +vG  G+GK+tl++  ++ + 
  EPX74652.1 20 SQINRKLV-RRGFQ-FNVMVVGPSGSGKSTLVNTLFSAHL 57
                57889999.89999.9999**************9999854 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.0     8e-05     0.035       5      59 ..      34     100 ..      31     113 .. 0.72
   2 ?   -0.9   0.1       2.2   9.4e+02     111     143 ..     169     201 ..     159     218 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 8e-05
                 EEEEE-STTSSHHHHHHHHHHS...........S---B---S..S-EEETTG.....GGTT-SEEEETT- CS
       SRPRB   5 avllvGlsdsGKTslftrLttd...........svkktvtSq..essaalkv..ksekgskltliDfPGh 59 
                 +v++vG+s sGK +l + L +            +   t   q  e +++ +v  +++ + +l+liD PG 
  EPX74652.1  34 NVMVVGPSGSGKSTLVNTLFSAhlmnskgrvdiQ---TPYRQttEINVTSHVvqENRVQLQLNLIDTPGY 100
                 699***************9998787777775431...22222124444444445566788999*****96 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 2.2
                 T---EEEEEE-TTSTT---HHHHHHHHHHHHHH CS
       SRPRB 111 davdiliACnKqelflakspklikdaLEkElnk 143
                 + v+++    K+++ +  +    k+++ +E++k
  EPX74652.1 169 EIVNVVPVIAKSDSLTLEERAAFKQQIREEITK 201
                 455555556799999999999999999999986 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   3.5e-05     0.015       1      26 [.      35      60 ..      35     118 .. 0.72

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 3.5e-05
  RNA_helicase  1 iwlyGpsgeGKStlakeLakallkkl 26
                  ++++Gpsg GKStl+++L +a l ++
    EPX74652.1 35 VMVVGPSGSGKSTLVNTLFSAHLMNS 60
                  6899*************877665333 PP

>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   0.00017     0.075       1      23 [.      37      60 ..      37      67 .. 0.77
   2 ?   -0.6   0.0       2.1   9.3e+02      89     100 ..      87      99 ..      71     119 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 0.00017
  ATP_bind_1  1 vvGpaGsGKttfvgal.seilelr 23
                vvGp GsGK+t+v++l s +l+++
  EPX74652.1 37 VVGPSGSGKSTLVNTLfSAHLMNS 60
                89***********99724565555 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 2.1
  ATP_bind_1  89 e.eddyllfDtPG 100
                 + + ++ l+DtPG
  EPX74652.1  87 RvQLQLNLIDTPG 99 
                 2234899*****9 PP

>> GBP  Guanylate-binding protein, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   6.8e-05      0.03      24      89 ..      35     105 ..      19     113 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 6.8e-05
                 EEEEEBTTSSHHHHHHHHHT....BSSSSESSSCSSST-SSEEEESCE.-SSSTCEEEEEEEEECBTTTTT CS
         GBP  24 vaivGlyRkGksfLlnklar....kkkGFslrstvesetkGiliWcep.hpkkekvalvLlDteGlgDvek 89 
                 v +vG    Gks L+n l      + kG     t +++t+ i + +++ + ++ +  l L+Dt G gD  +
  EPX74652.1  35 VMVVGPSGSGKSTLVNTLFSahlmNSKGRVDIQTPYRQTTEINVTSHVvQENRVQLQLNLIDTPGYGDQIN 105
                 778999999*********887787899999999************988799999**************333 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   6.4e-05     0.028       1      42 [.      34      79 ..      34      92 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 6.4e-05
                EEEEE--SSSSHHHHHHHGGGGB....S--EEEEE--TT--HHHHH CS
       AAA_5  1 dvlLvGppGtgKselaerlaaal....nreveyvqltrdtteedlk 42
                +v++vGp+G+gKs+l+  l +a     + +v +   +r+tte +++
  EPX74652.1 34 NVMVVGPSGSGKSTLVNTLFSAHlmnsKGRVDIQTPYRQTTEINVT 79
                699*************998555446666666666666777766655 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.3     7e-05      0.03      23      87 ..      36     114 ..       9     306 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 7e-05
      AAA_23  23 lItGpNGaGKTTildAikla.Lygetprlsrksgrgfeksdveiesegkvkayveltfenkdgry..............t 87 
                  ++Gp G+GK+T+++ +  a L + + +  +       + +++++s   +++ v+l+++ +d+                 
  EPX74652.1  36 MVVGPSGSGKSTLVNTLFSAhLMNSK-GRVDIQTPYRQTTEINVTSHVVQENRVQLQLNLIDTPGygdqinndkcwepiI 114
                 679************99999455544.44444444566777777766555566777766555544444444444444440 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   0.00014     0.062      21      77 ..       3      56 ..       1      87 [. 0.80

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00014
      DUF815 21 evdevklddLvgidkqkealventeqfleglpannvLLwGarGtGKSslvkallney 77
                +++++ l++ vg+d+  +++    +++++     nv+++G  G+GKS+lv +l+++ 
  EPX74652.1  3 NPESIPLNNYVGFDSITSQIN---RKLVRRGFQFNVMVVGPSGSGKSTLVNTLFSAH 56
                567777888888888777775...45667777789****************998765 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   0.00064      0.28       3      30 ..      34      61 ..      32     119 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00064
   PduV-EutP  3 killiGkvgsGKttLtqalkgeelkYkk 30
                +++++G++gsGK tL ++l   +l  +k
  EPX74652.1 34 NVMVVGPSGSGKSTLVNTLFSAHLMNSK 61
                69***************99885554443 PP

>> Guanylate_kin  Guanylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00041      0.18       5      30 ..      35      60 ..      32      89 .. 0.79
   2 ?   -1.7   0.0       4.7     2e+03     105     122 ..     134     151 ..     104     159 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00041
                   EEEESTTTSSHHHHHHHHHHHSTTTE CS
  Guanylate_kin  5 vvlvgpsgaGksslkkaLlselpekf 30
                   v++vgpsg Gks+l ++L+s +  + 
     EPX74652.1 35 VMVVGPSGSGKSTLVNTLFSAHLMNS 60
                   789****************9986555 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 4.7
                    HHHHHHTTTTEEEEEEEE CS
  Guanylate_kin 105 vkqlrkaelspiivFikp 122
                     k+l+ ++++    Fi+p
     EPX74652.1 134 EKRLQDTRVHCCLFFIRP 151
                    356666666666667665 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00028      0.12       3      22 ..      35      56 ..      33      94 .. 0.81
   2 ?   -2.8   0.0       9.5   4.2e+03     146     156 ..     176     186 ..     130     203 .. 0.59

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00028
                EEEEESTTCCHHHHHHHHH..C CS
        cobW  3 tvltGflGsGKTtLlnhll..e 22
                ++++G+ GsGK+tL+n+l   +
  EPX74652.1 35 VMVVGPSGSGKSTLVNTLFsaH 56
                5799*************98541 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 9.5
                 EEE-HHHHCHC CS
        cobW 146 vlnKtDlldee 156
                 v+ K D l+ e
  EPX74652.1 176 VIAKSDSLTLE 186
                 34444444433 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   0.00024      0.11      13      51 ..      25      63 ..      20     123 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00024
    ATPase_2 13 eilerepneiyfiYGpegsGKtaLlkeiienledkdkyv 51
                ++++r+ +  +++ Gp gsGK++L++ + + ++  +k +
  EPX74652.1 25 KLVRRGFQFNVMVVGPSGSGKSTLVNTLFSAHLMNSKGR 63
                577888888899**************9999887666644 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00036      0.16       4      22 ..      34      52 ..      32      64 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00036
      AAA_24  4 kiliyGpsgiGKTtlakel 22
                +++++Gpsg+GK+tl+++l
  EPX74652.1 34 NVMVVGPSGSGKSTLVNTL 52
                689*************998 PP

>> Adeno_IVa2  Adenovirus IVa2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00035      0.15      91     115 ..      36      60 ..      20      82 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00035
  Adeno_IVa2  91 viyGPtGsGksqllrnlissklisP 115
                 ++ GP GsGks l+ +l s++l++ 
  EPX74652.1  36 MVVGPSGSGKSTLVNTLFSAHLMNS 60 
                 578******************9975 PP

>> IIGP  Interferon-inducible GTPase (IIGP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   0.00038      0.17      35      55 ..      32      52 ..      15      56 .. 0.85
   2 ?   -3.0   0.0       6.5   2.9e+03     233     262 ..     180     208 ..     154     222 .. 0.62

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00038
                -EEEEEEESTTSSHHHHHHHH CS
        IIGP 35 klkiavtGdsGnGkssFinaL 55
                + +++v+G sG+Gks+ +n+L
  EPX74652.1 32 QFNVMVVGPSGSGKSTLVNTL 52
                679*****************9 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 6.5
                 SHHHHHHHHHHHHHHHHHHHHHT--BSS-C CS
        IIGP 233 tdkvieekreslkqkialealkaalvsiip 262
                 +d+   e r+ +kq+i +e  k + +++ p
  EPX74652.1 180 SDSLTLEERAAFKQQIREEITKHD-INLYP 208
                 344455556667777777766666.36555 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00035      0.15      21      54 ..      35      69 ..      21      86 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00035
      AAA_30 21 avltGpAGtGKttalkalreaweaa.ggrviglAp 54
                ++++Gp G+GK+t++++l  a+  + +grv + +p
  EPX74652.1 35 VMVVGPSGSGKSTLVNTLFSAHLMNsKGRVDIQTP 69
                5799**************55554444778776666 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.3   0.00047       0.2      27      46 ..      35      53 ..      12     125 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00047
                EEEEESTTSSHHHHHHHHHH CS
                xxxxxxxxxxxxxxxxxxxx RF
       SMC_N 27 taivGpNGSGKsnlldAilF 46
                 ++vGp GSGKs l++ + F
  EPX74652.1 35 VMVVGPSGSGKSTLVNTL-F 53
                4699**********9988.4 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0    0.0004      0.17      21      51 ..      31      61 ..      14      78 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.0004
                     SSS-EEEECSTTSSHHHHHHHHHHHSTTTTS CS
  Sigma54_activat 21 tdlsvlitGesGtGKellaraiheaskrkek 51
                      + +v+++G sG+GK++l +++++a   ++k
       EPX74652.1 31 FQFNVMVVGPSGSGKSTLVNTLFSAHLMNSK 61
                     3589*****************9987665555 PP

>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00063      0.28       2      57 ..      35      99 ..      34     104 .. 0.69

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00063
                EEEEESTTSSHHHHHHHHHHSSCSSS.........CTTTSSEEEEEEEEEETTEEEEEEEEEETT CS
         Ras  2 lvlvGdsavGKtslllrfvkdkFkee.........yesTigvdfytkeievdgkevkleiwDTAG 57
                +++vG s+ GK++l++   + +  ++         y +T  ++ +++ ++ +  +++l++ DT G
  EPX74652.1 35 VMVVGPSGSGKSTLVNTLFSAHLMNSkgrvdiqtpYRQTTEINVTSHVVQENRVQLQLNLIDTPG 99
                789************9876655433311111222267777777777777777888999999*988 PP

>> DUF1542  Domain of Unknown Function (DUF1542)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   0.00065      0.29      20      44 ..     177     201 ..     172     216 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00065
     DUF1542  20 InnnpnaTdeEKqaainkvnaalne 44 
                 I +++ +T eE++a+++++ ++ ++
  EPX74652.1 177 IAKSDSLTLEERAAFKQQIREEITK 201
                 899*****************99887 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00061      0.27       3      22 ..      35      54 ..      34      70 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00061
                EEEEC-TTTCHHHHHHHHHH CS
       NACHT  3 vilqGeaGsGKTtLlqklal 22
                v++ G++GsGK+tL+  l +
  EPX74652.1 35 VMVVGPSGSGKSTLVNTLFS 54
                789************99976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       855  (0.0476881); expected 358.6 (0.02)
Passed bias filter:                      671  (0.0374254); expected 358.6 (0.02)
Passed Vit filter:                       123  (0.00686039); expected 17.9 (0.001)
Passed Fwd filter:                        41  (0.0022868); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              41  [number of targets reported over threshold]
# CPU time: 0.65u 0.31s 00:00:00.96 Elapsed: 00:00:00.47
# Mc/sec: 2097.09
//
Query:       EPX74653.1  [L=555]
Description: transcription factor Moc3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-09   37.7  10.0    3.4e-09   36.7  10.0    1.6  1  Zn_clus   Fungal Zn(2)-Cys(6) binuclear cluster domain


Domain annotation for each model (and alignments):
>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.7  10.0   1.9e-13   3.4e-09       1      38 [.      48      85 ..      48      87 .. 0.94

  Alignments for each domain:
  == domain 1  score: 36.7 bits;  conditional E-value: 1.9e-13
                SS-HHHHHCT---STSSSS-HHHHHCTHHHCCCCTCCC CS
     Zn_clus  1 haCdnCrkkKvKCdakkPaCsnCkklnleCtfysessk 38
                ++C +Cr++++KCd+ kP C+nC k+n +C+ y+++s+
  EPX74653.1 48 TGCLTCRRRRIKCDETKPLCANCSKSNRNCEGYPNPST 85
                58*******************************99886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (555 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      248  (0.0138323); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 3790.88
//
Query:       EPX74654.1  [L=490]
Description: sleepy Slp1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.9e-19   68.8   7.9    3.7e-08   33.5   0.2    4.3  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    1.6e-15   57.2  16.4    6.4e-05   23.6   0.1    6.8  6  WD40         WD domain, G-beta repeat
    4.4e-08   32.5   0.1    0.00023   20.3   0.0    3.4  3  Ge1_WD40     WD40 region of Ge1, enhancer of mRNA-decapping p
    4.4e-07   30.0   0.5     0.0013   18.7   0.3    2.6  3  eIF2A        Eukaryotic translation initiation factor eIF2A


Domain annotation for each model (and alignments):
>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.5   0.2   8.3e-12   3.7e-08      18      90 ..     203     274 ..     189     276 .. 0.85
   2 !   19.8   0.3   1.6e-07    0.0007      23      89 ..     293     356 ..     280     357 .. 0.81
   3 !   14.0   0.4     1e-05     0.045      32      90 ..     342     401 ..     336     403 .. 0.85
   4 !    6.1   0.0    0.0031        14      33      73 ..     433     473 ..     416     488 .. 0.80

  Alignments for each domain:
  == domain 1  score: 33.5 bits;  conditional E-value: 8.3e-12
  ANAPC4_WD40  18 ellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  +++v   +   v +l+e++e+  v +++W++dg++L v+  +g v+++d+es+k ++++  +++ +v  l W 
   EPX74654.1 203 NVYVWNADSGDVSGLAETDESTYVAGVKWSQDGTFLSVGLGNGLVEIYDVESQKKLRTMAGHQS-RVGVLAWD 274
                  5666667777778889999****************************************88888.6******7 PP

  == domain 2  score: 19.8 bits;  conditional E-value: 1.6e-07
  ANAPC4_WD40  23 RlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                  R+  ++v +l   +++sev +LaW+ dg  La + +d+ v++ da s     + + ++  av+ + W
   EPX74654.1 293 RIAQHKVGEL--LGHESEVCGLAWRSDGLQLASGGNDNLVQIWDARSSIPKFTKTNHTA-AVKAVAW 356
                  5666666666..68899****************************98765555444444.6888888 PP

  == domain 3  score: 14.0 bits;  conditional E-value: 1e-05
  ANAPC4_WD40  32 leedkedsevrsLaWkp.dgklLav..aysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  ++++++   v+++aW p + +lLa   ++ d ++++ +a +g  v++++++s+  vt+l+W+
   EPX74654.1 342 FTKTNHTAAVKAVAWCPwQSNLLATggGTMDKKIHFWNAATGSRVNTVDAGSQ--VTSLTWS 401
                  56789999*******99456788873347899*******************99..******7 PP

  == domain 4  score: 6.1 bits;  conditional E-value: 0.0031
  ANAPC4_WD40  33 eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvv 73 
                  + +++ds+v   a +pdg++L  a sd ++++  +++ ++ 
   EPX74654.1 433 DIPAHDSRVLYSALSPDGRILSTAASDENLKFWRVNDSETK 473
                  45678889999999*****************9999888765 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.1   0.00036       1.6      13      38 .]     226     251 ..     202     251 .. 0.85
   2 ?    3.4   0.4     0.035   1.6e+02       2      34 ..     256     287 ..     255     291 .. 0.71
   3 !   23.6   0.1   1.4e-08   6.4e-05       4      38 .]     299     334 ..     296     334 .. 0.92
   4 !   12.0   0.1   6.9e-05      0.31       8      38 .]     345     379 ..     339     379 .. 0.73
   5 !    5.3   0.2    0.0091        41      11      38 .]     393     422 ..     383     422 .. 0.81
   6 !    9.7   0.0   0.00037       1.7       8      37 ..     435     465 ..     428     466 .. 0.76

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00036
                 EEEEEEETTSSEEEEE.ETTSEEEEEE CS
        WD40  13 vtslafspdgawlasG.sdDgtvriWd 38 
                 v ++++s+dg++l+ G + +g v i+d
  EPX74654.1 226 VAGVKWSQDGTFLSVGlG-NGLVEIYD 251
                 67888********99*88.******98 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.035
                 EEEEEEESS.SSEEEEEEETTSSE....EEEEETTSEE CS
        WD40   2 qclrtltGH.ssvtslafspdgaw....lasGsdDgtv 34 
                 ++lrt  GH s v  l      aw    l+sGs+ g +
  EPX74654.1 256 KKLRTMAGHqSRVGVL------AWdrhiLSSGSRSGAI 287
                 6799999**7668666......4455548889887766 PP

  == domain 3  score: 23.6 bits;  conditional E-value: 1.4e-08
                 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +++l GH s v++la+ +dg  lasG+ D+ v iWd
  EPX74654.1 299 VGELLGHeSEVCGLAWRSDGLQLASGGNDNLVQIWD 334
                 67788**888*************************9 PP

  == domain 4  score: 12.0 bits;  conditional E-value: 6.9e-05
                 ESS.SSEEEEEEETTSSE.EEEEE..TTSEEEEEE CS
        WD40   8 tGH.ssvtslafspdgaw.lasGs..dDgtvriWd 38 
                 t H   v ++a++p ++  la+G+  +D+++++W+
  EPX74654.1 345 TNHtAAVKAVAWCPWQSNlLATGGgtMDKKIHFWN 379
                 468556999987777777356874458*******8 PP

  == domain 5  score: 5.3 bits;  conditional E-value: 0.0091
                 SSEEEEEEETTSSEEEEEET..TSEEEEEE CS
        WD40  11 ssvtslafspdgawlasGsd..DgtvriWd 38 
                 s vtsl +sp  + ++s +   D+++ +W+
  EPX74654.1 393 SQVTSLTWSPQLKEIISTHGfpDNNLSVWS 422
                 35***********9*9876567******95 PP

  == domain 6  score: 9.7 bits;  conditional E-value: 0.00037
                 ESS.SSE..EEEEEETTSSEEEEE.ETTSEEEEE CS
        WD40   8 tGH.ssv..tslafspdgawlasG.sdDgtvriW 37 
                  +H s v  ++l  spdg+ l+++ s D ++++W
  EPX74654.1 435 PAHdSRVlySAL--SPDGRILSTAaS-DENLKFW 465
                 578555754555..*******98736.******* PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.2   0.0   0.00048       2.2     179     223 ..     215     259 ..     183     276 .. 0.79
   2 ?    0.2   0.0     0.063   2.8e+02     184     215 ..     303     334 ..     264     339 .. 0.72
   3 !   20.3   0.0     5e-08   0.00023     116     223 ..     346     474 ..     335     480 .. 0.60

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.00048
    Ge1_WD40 179 egllkieehsliveaafspdGtalatasedGevkffqvyledeee 223
                 +gl + +e + +    +s dGt l++   +G+v  + v  +++ +
  EPX74654.1 215 SGLAETDESTYVAGVKWSQDGTFLSVGLGNGLVEIYDVESQKKLR 259
                 58888999999*************************998776654 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.063
    Ge1_WD40 184 ieehsliveaafspdGtalatasedGevkffq 215
                 + ++s++   a+ +dG  la   +d +v+ + 
  EPX74654.1 303 LGHESEVCGLAWRSDGLQLASGGNDNLVQIWD 334
                 3456799999*****************99985 PP

  == domain 3  score: 20.3 bits;  conditional E-value: 5e-08
    Ge1_WD40 116 tvvsesdrviWCPyipeedae..........esdddeaskllvltrgdkae..iw..svdmiaskygsgelsveeiee......gllkieeh.slivea 193
                 ++++ ++ v WCP+ ++  a+            ++   s++  +  g+++    w  +++ i+s +g  + + +  +         + i  h s +  +
  EPX74654.1 346 NHTAAVKAVAWCPWQSNLLATgggtmdkkihFWNAATGSRVNTVDAGSQVTslTWspQLKEIISTHGFPDNNLSVWSYgttgvtKQVDIPAHdSRVLYS 444
                 56667777778887665533322211122222234445555555555555422353346777777776544444443311211123455545368**** PP

    Ge1_WD40 194 afspdGtalatasedGevkffqvyledeee 223
                 a+spdG  l+ta++d  +kf++v+ +++++
  EPX74654.1 445 ALSPDGRILSTAASDENLKFWRVNDSETKK 474
                 ***********************9888766 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0   0.00074       3.3     104     145 ..     227     265 ..     200     276 .. 0.71
   2 !   18.7   0.3   2.8e-07    0.0013      56     179 ..     303     424 ..     279     435 .. 0.77
   3 !   18.2   0.3     4e-07    0.0018      53     164 ..     342     459 ..     322     469 .. 0.66

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.00074
                 -EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-TT CS
       eIF2A 104 NtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakaeaan 145
                   +++s+ g+++   G+gn  G +ei+dv++ kk+ ++   +
  EPX74654.1 227 AGVKWSQDGTFLS-VGLGN--GLVEIYDVESQKKLRTMAGHQ 265
                 4588999998765.58997..899999999999998876554 PP

  == domain 2  score: 18.7 bits;  conditional E-value: 2.8e-07
                 EESSS.EEEEEE-TTSS-EEEEESSSSCEEEEEECS...CEEEEEEEEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-.TT--EEE CS
       eIF2A  56 lkkegpihdvaWspkskefaviyGkmpakvslfdlk...vkviskleeqkrNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakaea.anatlve 150
                 l +e ++  +aW +++ +  +  G  ++ v+++d +    k +++ ++++  ++ ++p +  +l  G g +  ++ +w+  + + +++++a ++ t++ 
  EPX74654.1 303 LGHESEVCGLAWRSDGLQ--LASGGNDNLVQIWDARssiPKFTKTNHTAAVKAVAWCPWQSNLLATGGGTMDKKIHFWNAATGSRVNTVDAgSQVTSLT 399
                 456667778888766655..568999*********85533444555566778999***9999999999********************9984688999* PP

                 E-TTSSEEEEEE-TTT-SSS-EEEEEETT CS
       eIF2A 151 wspdgryvlTattaprlrvdngfkiwsys 179
                 wsp+ + ++    +p    dn++ +wsy 
  EPX74654.1 400 WSPQLKEIISTHGFP----DNNLSVWSYG 424
                 ***999998888887....8888888885 PP

  == domain 3  score: 18.2 bits;  conditional E-value: 4e-07
                 ECCEESSS.EEEEEE-TTSS-EEEEES.SSSCEEEEEECS.CEEEEEEEEES-.-EEEE-TTSS.EEEEE-TTSSS-EEEEEETT.TTEEEEEEE-.TT CS
       eIF2A  53 vvelkkegpihdvaWspkskefaviyG.kmpakvslfdlk.vkviskleeqkr.Ntiffspkgk.lvllaGfgnlaGeleiwdvk.kkkkiakaea.an 145
                   + +++  +++vaW p +++++   G  m++k+++++   ++ + ++++ ++  ++ +sp+ k ++ + Gf + + ++  + ++  +k++    + + 
  EPX74654.1 342 FTKTNHTAAVKAVAWCPWQSNLLATGGgTMDKKIHFWNAAtGSRVNTVDAGSQvTSLTWSPQLKeIISTHGFPDNNLSVWSYGTTgVTKQVDIPAHdSR 440
                 445667778999999998888888776589999999998548888888776541568899985516667799888444444444443344443333134 PP

                 --EEEE-TTSSEEEEEE-T CS
       eIF2A 146 atlvewspdgryvlTatta 164
                   +   spdgr + Ta + 
  EPX74654.1 441 VLYSALSPDGRILSTAASD 459
                 4556788999999888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (490 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       382  (0.0213063); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.27s 00:00:00.85 Elapsed: 00:00:00.46
# Mc/sec: 3211.73
//
Query:       EPX74655.1  [L=1042]
Description: endo-1,3-beta-glucanase Eng1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   1.7e-150  501.1   6.0   2.6e-150  500.5   6.0    1.3  1  Glyco_hydro81C  Glycosyl hydrolase family 81 C-terminal domai
    1.9e-88  296.7   2.0    2.9e-88  296.1   2.0    1.3  1  Glyco_hydro_81  Glycosyl hydrolase family 81 N-terminal domai
    4.4e-55  183.7  48.6    1.2e-18   67.0   8.5    3.4  3  Carb_bind       Carbohydrate binding


Domain annotation for each model (and alignments):
>> Glyco_hydro81C  Glycosyl hydrolase family 81 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  500.5   6.0  4.4e-154  2.6e-150       2     349 .]     381     729 ..     380     729 .. 0.99

  Alignments for each domain:
  == domain 1  score: 500.5 bits;  conditional E-value: 4.4e-154
  Glyco_hydro81C   2 lseealkaiaeaaekelkqdlsaesnldsmYfsGKalakfatlvyvvkellkdeelakaalkkLkealerflenkqklplvYdekwkGvvssagy 96 
                     +s++al++i+++a++e++ d++aes+ldsmY+sGK+l k+a+l+++++++l+d+e+ ++++kkL++a++rf++nkq +plvYd++wkGv+s+ag+
      EPX74655.1 381 YSTDALNEIRAVATQEMNGDMDAESDLDSMYYSGKVLGKYAMLCLTINDILNDKEMSNTCVKKLESAFARFVDNKQINPLVYDSTWKGVISKAGL 475
                     7899******************************************************************************************* PP

  Glyco_hydro81C  97 ktdsgaDFGntlyNDHhfHygYfvyaaaviakldpswlek..nkewvntLvrDvanpseedeyfpvsRsfDwyhgHSwakGlfesadGkdqEsss 189
                     ++ ++aDFGnt+yNDHhfHygYfv +aavia++dp+w+++  nk++vn+L+rDv+np+++d++fpv+R+fD+yhgHSwa+Glfes+dGkd+Es+s
      EPX74655.1 476 SGYAMADFGNTYYNDHHFHYGYFVLTAAVIAHIDPDWINAgnNKKFVNSLIRDVSNPTSQDPHFPVQRMFDFYHGHSWAAGLFESNDGKDEESTS 570
                     **************************************998899*************************************************** PP

  Glyco_hydro81C 190 EdvnaayalklwGkvigdasleargnlmlaiearslqkyflleednkvqpkefignkvaGilfenkvdhttyFgankeyiqgihmlPllpvseli 284
                     Ed+n++y++klwG+v+gd ++++r+n++l+i +rsl+ky++++++n vqp++++ n vaGi+f+nk+ h+tyFg+n+e++qgihmlP++p+s++i
      EPX74655.1 571 EDYNFFYGMKLWGEVTGDDAMVDRANIILSILKRSLNKYIYYSKGN-VQPESMQPNYVAGITFMNKITHVTYFGTNPEFVQGIHMLPVTPISAYI 664
                     ******************************************9998.9*********************************************** PP

  Glyco_hydro81C 285 rskkfvkeeweallaeraekveegWkgilyanlalvdpkaayeffsseefkeklldgGasrtWyl 349
                     r+++f+++ew+++l +   +   +W+++lya++a+vdp ++y++fs+++f+ ++ld Gasr+Wyl
      EPX74655.1 665 REQSFIRNEWDNMLVHDLGAAIPSWRSLLYADYAIVDPWTSYSYFSTPAFQPSWLDVGASRAWYL 729
                     ****************999999*****************************************98 PP

>> Glyco_hydro_81  Glycosyl hydrolase family 81 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  296.1   2.0   4.9e-92   2.9e-88       1     323 []      65     374 ..      65     374 .. 0.94

  Alignments for each domain:
  == domain 1  score: 296.1 bits;  conditional E-value: 4.9e-92
  Glyco_hydro_81   1 hpvppsgvs.esdkpleTNkFYaNllLgdqtqpvythPYslkwskgk.swGlavshteasqrvfgpdksaepasyyvnPigiqslvlsaaelsss 93 
                     hp++p+gvs +++ p+eTNkFY Nll+g++t+  y+ PY  +w++++ + G+++sht+++qrvf+    +  +s+y+nPig++sl + a+ l++ 
      EPX74655.1  65 HPLTPAGVSeNNGMPIETNKFYDNLLVGSRTSFLYADPYRYWWQSSNtHSGICISHTDENQRVFDW--GSAVPSFYFNPIGLCSLGFGASGLTEA 157
                     999****887999******************************999559***************66..6789********************999 PP

  Glyco_hydro_81  94 tsltvsslkdlsvtvelsasksssssirfpLvqGmgFvTaiysnltp.viqsgvgfksveagssvkssvvtkyrvkledgqtWllYatpesssdl 187
                      + +v++++++s++v+++  ++ sss+r+ Lv+G +F Ta+ysn+ p +++s++++++++++s +++ + +ky+v+l+dg++Wl+Y++   +++l
      EPX74655.1 158 ITPEVDEVDQMSARVNFN--WG-SSSMRISLVEGLAFSTAEYSNAVPeIFTSTFFMNNIQSVSGSSA-T-QKYKVTLSDGHIWLIYVF---GNHL 244
                     *****************8..55.89**********************66777777788877655554.5.9****************9...89** PP

  Glyco_hydro_81 188 eltlesnstiegskefsGiiqvaklpgedseseavlDeaagvYatgaelsgsvsgeatgsYsfkykkeGkseesgkllmfalPhhlesldeetka 282
                     +l+++ n+ ++gs++f+G+iq+ak+p+ dse+e+++D++ag+Y+tg+++sg+v+g+ tg Y+f+ k++G+s  s+ +l f lPh+++sl  ++ a
      EPX74655.1 245 TLNANGNQVLVGSNSFTGYIQIAKIPSGDSEAESIYDKYAGAYVTGISVSGNVDGD-TGYYTFNLKTSGHS--SNVPLHFLLPHQIDSL--SSGA 334
                     **************************99***********************99999.*************7..589*************..5778 PP

  Glyco_hydro_81 283 rvtklklrsttkGemtavlgdswtleetnlpvelgfaPwss 323
                     + t+++l s ++G +tav+g+s+t+  t +p +++f+Pws+
      EPX74655.1 335 STTGISLVSLVSGYATAVAGNSITFADT-VPKDIHFLPWSP 374
                     899***********************95.5*********96 PP

>> Carb_bind  Carbohydrate binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.1  15.3     4e-22   2.4e-18       1      49 []     819     866 ..     819     866 .. 0.98
   2 !   67.0   8.5     2e-22   1.2e-18       1      48 [.     911     958 ..     911     959 .. 0.98
   3 !   62.9   8.9     4e-21   2.4e-17       1      49 []     992    1039 ..     992    1039 .. 0.98

  Alignments for each domain:
  == domain 1  score: 66.1 bits;  conditional E-value: 4e-22
   Carb_bind   1 kCgkavYdpskyvCydnkvLCPivngvalqaCggaCYspsqYsCengkL 49 
                 +C++avYdps+yvC++n +LCPivngv++++C+gaCY+p+qY C n++L
  EPX74655.1 819 TCNNAVYDPSAYVCDGN-FLCPIVNGVPYANCNGACYNPKQYGCYNNNL 866
                 6****************.****************************987 PP

  == domain 2  score: 67.0 bits;  conditional E-value: 2e-22
   Carb_bind   1 kCgkavYdpskyvCydnkvLCPivngvalqaCggaCYspsqYsCengk 48 
                 kCg+++Yd+s++vCydn+vLCPiv+g++++ C+g+CY+ps+YsC+ng+
  EPX74655.1 911 KCGNTMYDASAIVCYDNDVLCPIVDGNVFEDCNGSCYDPSKYSCDNGS 958
                 7*********************************************96 PP

  == domain 3  score: 62.9 bits;  conditional E-value: 4e-21
   Carb_bind    1 kCgkavYdpskyvCydnkvLCPivngvalqaCggaCYspsqYsCengkL 49  
                  +Cg+++Y++++y+Cy+n +LCPi+ g+ lqaCg+aCY+p+ YsC  gkL
  EPX74655.1  992 QCGQTWYNSNSYICYGN-LLCPIIGGKKLQACGSACYDPDSYSCLGGKL 1039
                  7****************.**************************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1042 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       747  (0.0416643); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.78u 0.27s 00:00:01.05 Elapsed: 00:00:00.45
# Mc/sec: 6954.70
//
Query:       EPX74656.1  [L=155]
Description: superoxide dismutase Sod1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.3e-47  159.6   6.5    6.1e-47  159.4   6.5    1.0  1  Sod_Cu    Copper/zinc superoxide dismutase (SODC)


Domain annotation for each model (and alignments):
>> Sod_Cu  Copper/zinc superoxide dismutase (SODC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.4   6.5   3.4e-51   6.1e-47       5     142 .]      12     151 ..       9     151 .. 0.96

  Alignments for each domain:
  == domain 1  score: 159.4 bits;  conditional E-value: 3.4e-51
                 EEEEEEEEEEEECSTTSTCEEEEEEEECSS-STEEEEEEEESSTTTTTTTGGG-SB-STT-.CSSTTTTTCS-TTEEEEEEESTTSEEEEEEEEESC.B CS
      Sod_Cu   5 kgevsGtvtftqeeskesgsvevtvevkglppggkhgfHiHengdcsagfksagghfnptgkkhgapndeerhaGDLgnievdadgtakleittdklvs 103
                 +++v+G+v+f+qe+  e+  v+v+v++kg +++ k gfHiH++gd ++g++sag+hfnptg++hg+  ++ rh+GDLgn+++d +g++k++++ d++++
  EPX74656.1  12 DTKVNGVVSFEQEN--EKAPVTVSVDLKGNDANAKRGFHIHQFGDNTNGCTSAGPHFNPTGTTHGDRAASVRHVGDLGNVVADGNGEIKAKFE-DSVIT 107
                 579*********88..4567***********999*******************************99999*********************98.***** PP

                 CSTTTBCTTEEEEEESS---TT.....SCHHHTTSSSEEEEEEE CS
      Sod_Cu 104 lkgensilgralvihagaDdlg.....eskptgnagariacGvI 142
                 l+g+++i+gr++vihag+Ddlg     es++tgnag+r acGvI
  EPX74656.1 108 LYGPHNIIGRTIVIHAGEDDLGkggneESLKTGNAGGRNACGVI 151
                 *******************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       363  (0.0202465); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 1132.28
//
Query:       EPX74657.1  [L=453]
Description: gamma-glutamyl phosphate reductase Pro1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-23   82.3   0.7    8.1e-17   60.9   0.2    2.3  2  Aldedh    Aldehyde dehydrogenase family
  ------ inclusion threshold ------
       0.14   12.5   0.2       0.62   10.4   0.0    2.1  2  HTH_57    ThcOx helix turn helix domain


Domain annotation for each model (and alignments):
>> Aldedh  Aldehyde dehydrogenase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.9   0.2   9.1e-21   8.1e-17      31     298 ..       3     286 ..       1     295 [. 0.84
   2 !   19.6   0.0     3e-08   0.00027     374     431 ..     324     381 ..     311     403 .. 0.91

  Alignments for each domain:
  == domain 1  score: 60.9 bits;  conditional E-value: 9.1e-21
                 HHHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHTHHHH..HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH..HSEEE......EEEC.... CS
      Aldedh  31 vdaavaaAkeafkawaklpaeeRaeiLrkaadlleerkeel..aeletletGkplaearaeveeaidvlryyaelaek..legev......lpss.... 115
                 ++a v++A++ f + ++l++++R e L+ + + l+++k+ +  a++e +++ k  +ea +  +++++ l++ ++   +  ++g v         +    
  EPX74657.1   3 LEANVKTARDSFITLQTLSVKDRDEALHVIVEELTSKKDAIlkANIEDMDAAKKQNEAGKLSSSMLKRLDLSTSGKYEsmVQG-VldvknlE--Dplgr 98 
                 5789************************************9334456677788888888877889999988776544422444.43445550..14555 PP

                 ........TTEEEEEEEEE-SEEEEEE-SSSCCHHHHHHHHHHHHTT-EEEEEE-TTSHHHHHHHHHHHHHT....TS-TTSEEE--SSTCCHHHHHHH CS
      Aldedh 116 ........egklalvrrePlGvvgaItPWNfPlllaawklapalaaGNtvvlKPaeetplsalllaelfeea....glPkgvlnvvtgsgsevgealve 202
                         ++ + + +  P+Gv ++I  ++    +++  +a a+  GN+vvlK  +e++ s +++ e+++ a    ++P+g++++v+   +ev++ l  
  EPX74657.1  99 vtygcrldDKLDLYRVSCPVGVLLVI--FEARPEVIINITALAIKSGNAVVLKGGTESTKSFAAMSEVVRSAlsktKVPQGAVQLVQN-REEVAQLLQF 194
                 556666634555555566*******9..899999999*************************99999999999999**********98.999******* PP

                 -TTESEEEEES-HHHHHHHHHHHHCTTSEEEEEE---EEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHT--B CS
      Aldedh 203 hpevdkvsftGstevgrkiakaaaknlkrvtlElGGknplivledaDldkaveaivkgafgnaGQvCiaasrllvqesiydefveklveaakklkv 298
                 ++ +d+v   Gs +  r i  + +    +v+    G  ++  ++daD d av+ +  + + +    C a++ llv+e+    ++  ++e++++ +v
  EPX74657.1 195 DRYIDLVIPRGSDKLVRYIKDNTK---IPVLGHADGLCSMYLHDDADKDLAVNVVFDAKTDYP-AGCNAVETLLVHENALSTVLPSVAEKLSQASV 286
                 *********************998...9*******************9999998888777764.67************************998876 PP

  == domain 2  score: 19.6 bits;  conditional E-value: 3e-08
                 EEEEEEESSHHHHHHHHHSSSEESEEEEE-SBHHHHHHHHHHS-SSEEEESSSST--T CS
      Aldedh 374 VlsvikfkdeeeaieiaNdteyGLaagvftkdleraervaerleaGnvyiNdsttgaa 431
                 Vl++ +++++eea++  N      + ++ t+++++a+++++ ++a  vy+N st++a 
  EPX74657.1 324 VLAIKTVSSLEEAMAHINTHGSKHTDCILTSSESTANKFMSGIDASGVYWNASTRFAD 381
                 99**************************************************987765 PP

>> HTH_57  ThcOx helix turn helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1      0.61   5.5e+03      34      34 ..      44      44 ..       5      85 .. 0.48
   2 ?   10.4   0.0   6.9e-05      0.62      19      85 ..     143     205 ..     133     207 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.61
                E CS
      HTH_57 34 l 34
                l
  EPX74657.1 44 L 44
                2 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 6.9e-05
                 SSEEEEE.-SS-EEEEES--HHHHHHHHHHHHT-B-HHHHHHHHHHHH-HHHHHHHHHHHHHHHHTT CS
      HTH_57  19 edklilqsspdaslklaapspgikaAleqLkagnaTeekLselvlekdgvealekFeayLqkLielG 85 
                  ++++l++  + + ++aa s+ +++Al + k     ++  ++lv+++++v++l +F++y++ +i +G
  EPX74657.1 143 GNAVVLKGGTESTKSFAAMSEVVRSALSKTK----VPQGAVQLVQNREEVAQLLQFDRYIDLVIPRG 205
                 5668888888888888888888888887654....5667799******************9988887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (453 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       576  (0.0321267); expected 358.6 (0.02)
Passed bias filter:                      457  (0.0254894); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 3225.19
//
Query:       EPX74658.1  [L=474]
Description: AGC/NDR protein kinase Orb6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      5e-59  199.8   0.0      3e-58  197.3   0.0    1.9  1  Pkinase          Protein kinase domain
    1.8e-26   93.0   0.0    9.8e-20   70.9   0.0    2.1  2  Pkinase_Tyr      Protein tyrosine kinase
    1.5e-06   27.4   0.0    2.2e-06   26.9   0.0    1.2  1  Haspin_kinase    Haspin like kinase domain
    3.2e-05   23.4   0.2    0.00019   20.9   0.0    2.1  2  Kdo              Lipopolysaccharide kinase (Kdo/WaaP) family
     0.0011   18.9   0.2      0.038   13.9   0.2    2.3  2  APH              Phosphotransferase enzyme family
     0.0088   15.4   0.0      0.017   14.4   0.0    1.5  1  Kinase-like      Kinase-like
  ------ inclusion threshold ------
      0.018   14.1   0.0      0.094   11.7   0.1    1.9  2  Seadorna_VP7     Seadornavirus VP7
      0.051   13.6   0.1       0.16   12.1   0.1    1.8  1  PA28_alpha       Proteasome activator pa28 alpha subunit
      0.086   11.8   0.0       0.15   11.0   0.0    1.3  1  Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  197.3   0.0   1.5e-61     3e-58       2     264 .]      98     397 ..      97     397 .. 0.94

  Alignments for each domain:
  == domain 1  score: 197.3 bits;  conditional E-value: 1.5e-61
                 EEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHH CS
     Pkinase   2 ekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseee 99 
                 ++++ +G+G+fG+V  + +++tgki+A+K + k ++ k+++ ++v +E  +l ++++p +v ly +f+++ +lyl++e+++gg+l+++l +  ++se+ 
  EPX74658.1  98 STIKVIGKGAFGEVRLVQKRDTGKIYAMKSLLKTEMFKRDQlSHVKAERDLLVESDSPWVVSLYFSFQDSLYLYLIMEFLPGGDLMTMLINYDTFSEDV 196
                 67899*******************************999999************************************************99******* PP

                 HHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS...........................................BC CS
     Pkinase 100 akkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk...........................................lt 155
                 +++++++++ +++ +H++g iHrD+Kp+NiLid++g++K++DFGl++ + ++ +                                           + 
  EPX74658.1 197 TRFYMAETVLAIADVHRMGYIHRDIKPDNILIDRDGHIKLSDFGLSTGFYKQDQsasymrppksgntlkrgqmvdaiwltmsskdkmatwkknrrvmAY 295
                 ***********************************************999988889****************************************999 PP

                 TTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTT CS
     Pkinase 156 sfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRlt 254
                 s vgt++Y+APE+  +++y++ +D+WslG i++e l g ppf +e+++e+++k+++           +++ +p++ ++s ea+dl+++l++   ++Rl+
  EPX74658.1 296 STVGTPDYIAPEIFLQRGYGQDCDWWSLGTIMFECLIGWPPFCSENSHETYRKIVNW---------RETLVFPNDIHLSFEARDLMNRLMTD-SEHRLG 384
                 *******************************************77777766655555.........5577899***************9875.555665 PP

                 ...HHHHHTSGGG CS
     Pkinase 255 ...aeellqhpyl 264
                    ++e++qhpy+
  EPX74658.1 385 rggVTEIMQHPYF 397
                 555*********8 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.9   0.0   4.9e-23   9.8e-20       3     159 ..      99     251 ..      97     260 .. 0.86
   2 !   20.0   0.0   1.7e-07   0.00034     160     241 ..     292     375 ..     281     391 .. 0.77

  Alignments for each domain:
  == domain 1  score: 70.9 bits;  conditional E-value: 4.9e-23
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEE..STTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtl..keeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkeke 98 
                  + k +G+GafG+V   + +    ++    a+K+l  +e  ++++ +++  e +++ + + p +v+l+    ++  l++++e+++gGdL ++L +   +
   EPX74658.1  99 TIKVIGKGAFGEVRLVQKR----DTGKIYAMKSLlkTEMFKRDQLSHVKAERDLLVESDSPWVVSLYFSFQDSLYLYLIMEFLPGGDLMTMLINY--D 190
                  6789*********999888....555566777764234566777889999*******************************************98..6 PP

                  TSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEE CS
  Pkinase_Tyr  99 kltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddey 159
                  +++ + +  ++++   +++ ++++ ++Hrd+   N+L++++ ++k+sDfGL+   +k+d+ 
   EPX74658.1 191 TFSEDVTRFYMAETVLAIADVHRMGYIHRDIKPDNILIDRDGHIKLSDFGLSTGFYKQDQS 251
                  7777777777888889999**********************************99888876 PP

  == domain 2  score: 20.0 bits;  conditional E-value: 1.7e-07
                  EETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHH.HTTEES-BBTTSB..HHHHHHHHHH CS
  Pkinase_Tyr 160 vkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglkneevlekl.kegkrlekpekcp..eelyelmkkc 241
                  v++ ++     ++apE++ ++ + +  D Ws G++++E +  g  p+ + +++e+++k+ + ++ l  p++++   e  +lm++ 
   EPX74658.1 292 VMAYSTVGTPDYIAPEIFLQRGYGQDCDWWSLGTIMFECLI-GWPPFCSENSHETYRKIvNWRETLVFPNDIHlsFEARDLMNRL 375
                  55566667789***************************998.*****99999998888856666666666554004455666654 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   0.0   1.1e-09   2.2e-06     175     264 ..     153     253 ..      93     257 .. 0.76

  Alignments for each domain:
  == domain 1  score: 26.9 bits;  conditional E-value: 1.1e-09
  Haspin_kinase 175 k......pdfyseqqlflvlllkd.kGtdLeev..klkswkqalsifwqivkiLyvaE.tkfeFEHRdLhldniLvdknlnvtlidlklsRle.ss 259
                    +        f  ++ l+l+l++++  G dL ++  +  ++++    f+   ++L++a+  +  + HRd++ dniL+d+ +++ l d+ ls    ++
     EPX74658.1 153 DspwvvsLYFSFQDSLYLYLIMEFlPGGDLMTMliNYDTFSEDVTRFYMAETVLAIADvHRMGYIHRDIKPDNILIDRDGHIKLSDFGLSTGFyKQ 248
                    3444444456668899999999984599999997889999999999***********94589*************************999755244 PP

  Haspin_kinase 260 egkvl 264
                    ++ ++
     EPX74658.1 249 DQSAS 253
                    44455 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1      0.38   7.5e+02      22      55 ..      25      58 ..      21      81 .. 0.80
   2 !   20.9   0.0   9.3e-08   0.00019      95     166 ..     173     239 ..     170     244 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.38
         Kdo 22 fvvaekvnaalrkyyrggllgklskdlyrfklgr 55
                 ++a+k++ +  +yy+    + + +++ r++l+r
  EPX74658.1 25 LEKAQKTKKYIEHYYKVAVEHAVERNQRRIELER 58
                4566677899999999999999999987777665 PP

  == domain 2  score: 20.9 bits;  conditional E-value: 9.3e-08
         Kdo  95 lterlegaqdLedllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDl 166
                 ++e l g  dL ++l ++++++e ++r  + ++  +ia+ hr+g  H+d+ + nil++ ++    +i l D+
  EPX74658.1 173 IMEFLPG-GDLMTMLINYDTFSEDVTRFYMAETVLAIADVHRMGYIHRDIKPDNILIDRDG----HIKLSDF 239
                 5555544.5899999999****************************************998....6666665 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0      0.04        80      56      84 ..     156     184 ..     113     214 .. 0.76
   2 !   13.9   0.2   1.9e-05     0.038     164     187 ..     212     234 ..     187     243 .. 0.77

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.04
                 B-CTTBS-EEETTEEEEEEE----EE-SS CS
         APH  56 evlagdtddeeigllfalieyvpgrsllr 84 
                  v+ +  + +++++l++++e++pg +l +
  EPX74658.1 156 WVVSLYFSFQDSLYLYLIMEFLPGGDLMT 184
                 444555589999*************9988 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 1.9e-05
                 S-EEEE-SS-SGGGEEEC..TTEE CS
         APH 164 lptvllHgDlhpgNllvdpddgrv 187
                  +++ +H+D++p+N+l+d +dg++
  EPX74658.1 212 HRMGYIHRDIKPDNILID-RDGHI 234
                 37799*************.88877 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   8.7e-06     0.017     137     189 ..     189     240 ..     151     255 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 8.7e-06
  Kinase-like 137 thkkletiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggft 189
                   +   e++ r ++ ++ +  +a  +  g +h ++++dn+l d++g ++l +f+
   EPX74658.1 189 YDTFSEDVTRFYM-AETVLAIADVHRMGYIHRDIKPDNILIDRDGHIKLSDFG 240
                  4555677888888.77888889*****************************96 PP

>> Seadorna_VP7  Seadornavirus VP7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   4.7e-05     0.094     153     186 ..     207     238 ..     195     242 .. 0.86
   2 ?   -0.8   0.0       0.3     6e+02     238     296 ..     375     432 ..     361     439 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 4.7e-05
  Seadorna_VP7 153 dLmdfhsestnllhGDcnpenlmcDknGylklvD 186
                   ++ d+h    +++h D++p+n++ D+ G +kl D
    EPX74658.1 207 AIADVH--RMGYIHRDIKPDNILIDRDGHIKLSD 238
                   567788..689*********************98 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.3
  Seadorna_VP7 238 lYldLdevasdfnveagtrltdlldrlevtsdlvsavamlpflallndleyynidDvls 296
                   l  d ++ +  ++v+++++   + ++++  +   s  + +p+l  + d +y+ +dD ++
    EPX74658.1 375 LMTDSEHRLGRGGVTEIMQHPYF-NGIDWDNLRSSPAPFIPSLRSITDTHYFPVDDLSQ 432
                   55555566666777777777666.88999888899999****************99876 PP

>> PA28_alpha  Proteasome activator pa28 alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   7.9e-05      0.16      29      55 ..     121     147 ..     113     150 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 7.9e-05
  PA28_alpha  29 kiveLdeLLkspsfnvsdlsevhadLn 55 
                 ki  + +LLk+++f+ ++ls v+a+ +
  EPX74658.1 121 KIYAMKSLLKTEMFKRDQLSHVKAERD 147
                 9**********************9855 PP

>> Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   7.8e-05      0.15     290     312 ..     207     228 ..     189     238 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 7.8e-05
  Pox_ser-thr_kin 290 kiyelpdcenflhvDlkPdniLi 312
                       i +   ++ ++h D+kPdniLi
       EPX74658.1 207 AIADV-HRMGYIHRDIKPDNILI 228
                      45344.6999************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (474 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       608  (0.0339115); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.62u 0.28s 00:00:00.90 Elapsed: 00:00:00.46
# Mc/sec: 3100.08
//
Query:       EPX74659.1  [L=1542]
Description: P-type ATPase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      7e-66  222.5  27.8      7e-66  222.5  27.8    2.7  3  PhoLip_ATPase_C  Phospholipid-translocating P-type ATPase C-t
    1.9e-20   72.3   0.4    1.9e-20   72.3   0.4    2.8  2  PhoLip_ATPase_N  Phospholipid-translocating ATPase N-terminal
    8.5e-12   45.0   0.0    5.1e-11   42.5   0.0    2.2  2  Cation_ATPase    Cation transport ATPase (P-type)
    1.4e-11   44.2   0.0    1.4e-11   44.2   0.0    2.3  3  E1-E2_ATPase     E1-E2 ATPase
    2.4e-09   37.8   1.1     0.0072   16.6   0.0    3.6  3  Hydrolase        haloacid dehalogenase-like hydrolase
    0.00078   19.3   0.1     0.0021   17.8   0.1    1.7  1  Hydrolase_3      haloacid dehalogenase-like hydrolase
  ------ inclusion threshold ------
       0.12   12.5   1.3        4.1    7.4   0.0    3.3  3  HAD_2            Haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> PhoLip_ATPase_C  Phospholipid-translocating P-type ATPase C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.4       1.4   3.5e+03      54     180 ..     271     283 ..     236     304 .. 0.44
   2 ?   -1.1   4.3      0.49   1.3e+03     151     203 ..     560     613 ..     535     638 .. 0.39
   3 !  222.5  27.8   2.7e-69     7e-66       1     249 []    1249    1498 ..    1249    1498 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1.4
  PhoLip_ATPase_C  54 ngfsgqslyeswlltlynllftslpvivlgifdqdvsaelllkyPelYklgqknklfnlktfllwileglyqsliifflsylvlddssfsdgkt 147
                       g                                                              w   g                         
       EPX74659.1 271 PG--------------------------------------------------------------WSTTG------------------------- 277
                      11..............................................................11111......................... PP

  PhoLip_ATPase_C 148 ndlqlfgtlvftalvlvvnlkvaletktwtlil 180
                                                 t+t i+
       EPX74659.1 278 ---------------------------TYTTII 283
                      ...........................222222 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.49
  PhoLip_ATPase_C 151 qlfgtlvftalvlvvnlkval...etktwtl....iliililgsillyflflllyssllp 203
                      + f ++v +a+ ++v   +     etk w l    + ++ il      + f++ly++++p
       EPX74659.1 560 FIFVLVVSMAIYCTVAYFIWQkkvETKLWYLsdgsLAFVPIL------VSFIILYNTMVP 613
                      122222222222222222211100222221122112222222......222223333332 PP

  == domain 3  score: 222.5 bits;  conditional E-value: 2.7e-69
  PhoLip_ATPase_C    1 vraSDyaiaqFrfLkrLLlvhGrwsyrRisklilyffyKnvvftlvqfwfqfyngfsgqslyeswlltlynllftslpvivlgifdqdvsae 92  
                       +r+SD++ia+F+fL +LL++hGrw+y R+sk+il +fyK+ +f+l+q++ q + g++gqslye+w lt++n+lf+sl+vi lgifd+d++ +
       EPX74659.1 1249 ARSSDFSIARFKFLIKLLFCHGRWNYVRLSKYILGTFYKEQFFFLMQAIMQPFVGYTGQSLYENWGLTCFNTLFSSLCVIGLGIFDKDLNVS 1340
                       69****************************************************************************************** PP

  PhoLip_ATPase_C   93 lllkyPelYklgqknklfnlktfllwileglyqsliifflsylvlddssfsdgktndlqlfgtlvftalvlvvnlkval.etktwtliliil 183 
                       ++ ++PelY++g +n+ fn+++++ w   +++q++++f+++y++++ ++    ++n+l++fg+l+fta+++v+n+k+++ e++++++i++i+
       EPX74659.1 1341 TVVAVPELYQKGINNEAFNWQVYVRWSSLAFMQAFLVFYVTYALYGLKQ---LTDNNLFAFGQLIFTAAIVVMNFKLVFvEMQYVSIISYIV 1429
                       ********************************************99765...69***********************988************ PP

  PhoLip_ATPase_C  184 ilgsillyflflllyssllps...ssefygvleelfsspsfwlvlllvvvvallpdllikvlkrtffps 249 
                       i++++l +++f++++s  +p    +    ++++++ +++ +wl++llv+v+a+++d++ ++++r+++p+
       EPX74659.1 1430 IILTLLGWMFFNMFISDHYPDqniYLGKSQFFHHFGKNAGWWLTVLLVTVLAVVLDIILQMMRRMLKPT 1498
                       *************9999999888866666678**********************************996 PP

>> PhoLip_ATPase_N  Phospholipid-translocating ATPase N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.3   0.4   7.3e-24   1.9e-20      11      67 .]     226     282 ..     214     282 .. 0.92
   2 ?   -0.6   0.9      0.42   1.1e+03      17      36 ..    1273    1292 ..    1267    1303 .. 0.70

  Alignments for each domain:
  == domain 1  score: 72.3 bits;  conditional E-value: 7.3e-24
  PhoLip_ATPase_N  11 kkkyasNkIsTsKYtlltFlpknLfeqFrrvaNlYFLviailqliPqisplspvtti 67 
                       k + +N+I +s+Y+ ++F+p++++ qF++ aN+YFL+iai+q+iP++s+++++tti
       EPX74659.1 226 GKPFIKNSIVSSRYNKYNFVPLQIIAQFSKTANCYFLLIAIMQMIPGWSTTGTYTTI 282
                      568****************************************************97 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.42
  PhoLip_ATPase_N   17 NkIsTsKYtlltFlpknLfe 36  
                       N+++ sKY l tF   ++f 
       EPX74659.1 1273 NYVRLSKYILGTFYKEQFFF 1292
                       77788888777776665553 PP

>> Cation_ATPase  Cation transport ATPase (P-type)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.5   0.0     2e-14   5.1e-11      18      87 ..     769     857 ..     737     859 .. 0.78
   2 ?   -1.3   0.0      0.94   2.4e+03      15      28 ..    1077    1090 ..    1007    1093 .. 0.70

  Alignments for each domain:
  == domain 1  score: 42.5 bits;  conditional E-value: 2e-14
  Cation_ATPase  18 kllGnktEsALlvlaekl...............gldteelree.............tkkvqeipFnssrKrmsvvlklepekkvrlyvKGApeiil 85 
                      + +++E AL+ +a++l                        +             +k +++i+Fns+rKrmsv+++  p+++++l++KGA   i+
     EPX74659.1 769 YQSTSPDELALVHAAQQLgyividrnmdavsirL--------HypldnrsypitktYKVLNTIEFNSKRKRMSVIVRM-PNGRICLFTKGADSTIT 855
                    456689************7776666555555440........25555555555555*********************9.8***************9 PP

  Cation_ATPase  86 kr 87 
                    +r
     EPX74659.1 856 ER 857
                    97 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.94
  Cation_ATPase   15 devkllGnktEsAL 28  
                     + + l+G+k E+A+
     EPX74659.1 1077 KFWVLTGDKKETAI 1090
                     44569999999997 PP

>> E1-E2_ATPase  E1-E2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.9   1.8       6.5   1.7e+04     118     154 ..     249     288 ..     247     293 .. 0.57
   2 !   44.2   0.0   5.6e-15   1.4e-11      16     168 ..     401     621 ..     393     626 .. 0.90
   3 ?   -3.4   0.5       2.4   6.1e+03     120     141 ..    1420    1441 ..    1413    1449 .. 0.65

  Alignments for each domain:
  == domain 1  score: -4.9 bits;  conditional E-value: 6.5
                   HHHHHHHHHHHHHHHHHHS-STTTSSTT...HHHHHHHHH CS
  E1-E2_ATPase 118 lgkvlvpvvlliallvflialllgksla...eallralal 154
                   +++++++++ + +ll+++++++ g s++   ++++  l +
    EPX74659.1 249 IIAQFSKTANCYFLLIAIMQMIPGWSTTgtyTTIIPLLIF 288
                   5667777777777777777777776665333333333333 PP

  == domain 2  score: 44.2 bits;  conditional E-value: 5.6e-15
                   EEEEGGG--TTSEEEEETT-B--SEEEEEE.....E-SEEE-TTTS---S-EE-........................................... CS
  E1-E2_ATPase  16 eeidakelvpGDivllkagdrvpaDgrive.....gsaevdesaLTGEslpvek........................................... 64 
                    + d k++++GDiv l ++++vpaD++ ++     g   v+++aL GE    +k                                           
    EPX74659.1 401 ANCDWKDVRIGDIVRLSSNESVPADVIALSsphpnGAVYVETAALDGETSLKTKlvnstlrsyckdindlsrlsgeciiedpngnlyefngrirlns 497
                   567889************************77764455*********************************************************** PP

                   .......G-TTEE-TT-EEEE.-EEEEEEEE-TTTSTTTTTSTTS--------HHHHHHHHHHHHHHHHHHHHHHHHHHS-STTTSSTT........ CS
  E1-E2_ATPase  65 .......ekgdmvfsGtvvvs.geakavVtatgedtelgkiarlveeakskktplqkkldklgkvlvpvvlliallvflialllgksla........ 145
                           ++d ++ G++  +  e+ + V+ tge+t++   a+   +   k +++q+  +k++ +++++v+ +a+++ ++ ++++k++         
    EPX74659.1 498 eekeipiANNDVIYRGSILRNtPELFGLVIYTGEETKIRMNASRNLRV--KAPSMQRDTNKIVIFIFVLVVSMAIYCTVAYFIWQKKVEtklwylsd 592
                   ***99999***********99668999**********99766655555..8999******************************9999988999998 PP

                   ......HHHHHHHHHHHHHS-TTHHHHHH CS
  E1-E2_ATPase 146 ......eallralallvaaiPcaLplavp 168
                          +l++++ l   ++P+ L + + 
    EPX74659.1 593 gslafvPILVSFIILYNTMVPISLYVSME 621
                   88777777777777777778877777665 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 2.4
                    HHHHHHHHHHHHHHHHS-STTT CS
  E1-E2_ATPase  120 kvlvpvvlliallvflialllg 141 
                    +++++++ ++++l++l +++ +
    EPX74659.1 1420 QYVSIISYIVIILTLLGWMFFN 1441
                    4556666666666666666654 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.013        33       3      20 ..     662     679 ..     660     696 .. 0.84
   2 !   16.6   0.0   2.8e-06    0.0072     103     170 ..     985    1113 ..     850    1123 .. 0.66
   3 !   13.0   0.1   3.6e-05     0.093     171     209 ..    1194    1234 ..    1167    1235 .. 0.75

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.013
                 EEEEESBTTTBCHHHHHH CS
                 xxxxxxxxxxxxxxxxxx RF
   Hydrolase   3 tvvfDkdGTLttgepsve 20 
                  v+ Dk+GTLt+  +  +
  EPX74659.1 662 HVFSDKTGTLTDNVMLFR 679
                 6899********998765 PP

  == domain 2  score: 16.6 bits;  conditional E-value: 2.8e-06
                  H.............................................................TTHHHHHHHHHHTHHBHTTHHHHHHHHHHTTEEEE CS
                  x.............................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  103 l.............................................................qaralavftiadplkvkpeaaeavasLkaagievv 138 
                                                                                + +  +  +i+d+  +  ++ e ++sL +agi+ +
  EPX74659.1  985 MfentfkhvnafasdglrtliyahkfleeeeykewkalndealnsltnrqqllddaaelienNLEFSGATAIEDK--LQMGVPESINSLFRAGIKFW 1079
                  044444444444445555555555555555555555555555555555555556666666667788999999999..******************** PP

                  EEESSEHHHHHHHHHHTT.GGGE.SEEEEHHCES CS
                  xxxxxxxxxxxxxxxxxx.xxxx.xxxxxxxxxx RF
   Hydrolase  139 lltgdnpetaeraanqlG.ddyf.daviasdiet 170 
                  +ltgd +eta  + + +G  + f  + + +++++
  EPX74659.1 1080 VLTGDKKETAINIGHSCGvIKEFsTVLVLGSVDE 1113
                  ******************8444436666555555 PP

  == domain 3  score: 13.0 bits;  conditional E-value: 3.6e-05
                  STTTSHHHHHHHHHHHT..STGGGEEEEESSHHHHHHHHHT CS
                  xxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  171 vakpspegkvaaireLq..gkpeevamVGDgvnDaaalaaA 209 
                  +  +sp +k   ++  +  ++ + +++VGDg+nD+a++++A
  EPX74659.1 1194 CCRASPMQKAFMVKSVRenIDSAVTLAVGDGANDIAMIQEA 1234
                  455577777777777764488999**************998 PP

>> Hydrolase_3  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.1   8.4e-07    0.0021     188     227 ..    1202    1239 ..    1136    1243 .. 0.83

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 8.4e-07
                   HHHHHHHHHHHCT--GGGEEEEESSGGGHHHHHHSSEEEE CS
  Hydrolase_3  188 KgtalkklakelnisleeviafGDgeNDieMLeaaglgvA 227 
                   K+  +k +    ni+++ ++a+GDg NDi+M++ a +g+ 
   EPX74659.1 1202 KAFMVKSVR--ENIDSAVTLAVGDGANDIAMIQEAHVGIG 1239
                   555555555..689*******************9977764 PP

>> HAD_2  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.0    0.0016       4.1      78     146 ..    1058    1125 ..     986    1135 .. 0.71
   2 ?    0.5   0.1      0.22   5.6e+02     148     173 ..    1211    1236 ..    1190    1240 .. 0.82
   3 ?    0.7   0.1      0.19     5e+02      14      67 ..    1485    1539 ..    1479    1542 .] 0.87

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0016
       HAD_2   78 vkpydgvkelLeeLkeagyklgivTsksreaveekleqlgiesyFdvivtsedvekkKPdpeviekale 146 
                   k+  gv e +++L +ag+k  + T  ++e++ +    +g+ + F+++++   v +k P  +   k  +
  EPX74659.1 1058 DKLQMGVPESINSLFRAGIKFWVLTGDKKETAINIGHSCGVIKEFSTVLVLGSVDEK-PGSDDTIKGGQ 1125
                  3566799******************************************99998765.87665555555 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.22
       HAD_2  148 lklkkeeviyvGDsptDieaakkagi 173 
                   +++++ ++ vGD  +Di   ++a +
  EPX74659.1 1211 ENIDSAVTLAVGDGANDIAMIQEAHV 1236
                  47899999**********99888865 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.19
       HAD_2   14 eliiqafnelleeyglselseeelrkliglslrellrklgeseeeee.kieellr 67  
                  ++i+q+++++l+  + + + e e + +i+   ++  r++++s+ +e+  ie++l+
  EPX74659.1 1485 DIILQMMRRMLKPTDTDIFVELESDAFIHSRFEQESREFFNSNSNEKdEIERYLK 1539
                  7899***************************999999999987766668888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1542 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1131  (0.0630822); expected 358.6 (0.02)
Passed bias filter:                      558  (0.0311228); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 1.00u 0.30s 00:00:01.30 Elapsed: 00:00:00.48
# Mc/sec: 9612.77
//
Query:       EPX74660.1  [L=798]
Description: XP-G family nuclease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      4e-40  137.6   2.7    6.2e-40  136.9   2.7    1.3  1  MKT1_C    Temperature dependent protein affecting M2 dsRNA re
    3.2e-28   97.9   0.0    1.1e-27   96.2   0.0    1.9  2  MKT1_N    Temperature dependent protein affecting M2 dsRNA re
    1.7e-07   31.7   0.0    4.3e-07   30.4   0.0    1.7  1  XPG_N     XPG N-terminal domain


Domain annotation for each model (and alignments):
>> MKT1_C  Temperature dependent protein affecting M2 dsRNA replication
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.9   2.7     1e-43   6.2e-40       1     239 [.     559     793 ..     559     794 .. 0.94

  Alignments for each domain:
  == domain 1  score: 136.9 bits;  conditional E-value: 1e-43
      MKT1_C   1 RfLelrgyvdekheltkwGkaLakalkelk.eleealllaleLlrlgvLtgdenekpeysgapslgseeekksilLisRvasLlplrlkpigytgplsr 98 
                 RfL++r++v+++h+lt+wG+ L+ al++++ +++ ++++++eLlrl+ +++ ++   + s      +    + i ++s++a++lp+  ++     + +r
  EPX74660.1 559 RFLQIRSFVSTTHQLTSWGSPLLIALEKCNiRYQSSMCVLFELLRLRQIKEPRFDSATSS------TLYIPSVIEFLSKLATFLPIGKEAVYQLSTSNR 651
                 9***************************************************66655555......344589*************9866666666667* PP

      MKT1_C  99 dllaFrslvkllrrslreliEavlvslllsgeanrerddwlelsssLPffldt.ntglGivvktyldellkeeekstsgeakedalellkkvfpnvedl 196
                 dll+F+ + +++  +l+el  ++++s++++++a+r+  + +++ +  Pf  +  + + Gi+++ +l++l +++++ + + a e+a+++lk+ fp+v+d+
  EPX74660.1 652 DLLQFYMMQTSFGANLHELAAILIASVIMNANADRNLVNPYSIRKTFPFRRNFcSLLSGIIMNQLLQTLSTSDNEMNREVAVETAFKKLKEDFPYVTDI 750
                 ************************************99***************9**************9999999999999****************** PP

      MKT1_C 197 kedlerafefwdavyalvkelseekliskellkefekadewle 239
                 k+ l +++ fw+a++++vke++++++i k +++++  +++wl+
  EPX74660.1 751 KAFLSDFLDFWSAFMNGVKEAESTSAIGKLVASKLYLTNDWLN 793
                 *****************************************97 PP

>> MKT1_N  Temperature dependent protein affecting M2 dsRNA replication
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.2   0.0   1.9e-31   1.1e-27       1      84 [.     355     461 ..     355     465 .. 0.96
   2 ?   -2.8   0.0       1.4   8.7e+03      20      37 ..     707     724 ..     701     745 .. 0.68

  Alignments for each domain:
  == domain 1  score: 96.2 bits;  conditional E-value: 1.9e-31
      MKT1_N   1 PnDlheylgqrLPeelyyylsrGligprilnaltsgelieeppl........................dggdseeYrklvtdllteireqalnLltqrl 75 
                 P+D++ ++g+rLP+elyyy+srGl++ r+++al+sg++++++++                         + ++++ r++v+dl+ ei++q lnLltq+l
  EPX74660.1 355 PTDINVFMGTRLPNELYYYISRGLLPTRMIGALVSGCFSDPVSIleqhvgnssnqesvkpdpaahknaVAMAAVNHRRFVDDLE-EIWSQGLNLLTQPL 452
                 89***************************************************************955559*************.************** PP

      MKT1_N  76 hrfyqakdv 84 
                 hrfyqa+dv
  EPX74660.1 453 HRFYQARDV 461
                 ********9 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.4
      MKT1_N  20 lsrGligprilnaltsge 37 
                 l +G+i  ++l++l ++ 
  EPX74660.1 707 LLSGIIMNQLLQTLSTSD 724
                 667888888888887743 PP

>> XPG_N  XPG N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   0.0   7.1e-11   4.3e-07       1      93 [.       1      97 [.       1     105 [. 0.83

  Alignments for each domain:
  == domain 1  score: 30.4 bits;  conditional E-value: 7.1e-11
                X--TTHHHHHHHH-GEEEEEGGGGTTEEEEEEHHHHHHHHHHHSE.ETTEE-BS....-HHHHHHHHHHHHHHHTTEEEEEEE--S--GGGHHHHHH CS
       XPG_N  1 MGikgLlkllkevaairsvsiealegkklaiDaslwlyrfliavreqlgnalen....tshlmglfsrllrlldfgikPifVFdgkapdlkkeelek 93
                M i++L+ +l +       si +  ++kl+iDas +l  +l+    ++ +a++     + +  +l + l  l  + i+P+fVF+g  +++ ++ ++ 
  EPX74660.1  1 MTIHSLELFLIKNRHEFTCSISQIANRKLGIDASYFLLELLKRLSPEELQAISVdgesEILYNYLDQFLNVLNMYSITPLFVFNGISLTFEASGQSE 97
                99****99998888667899******************************999878744455555555667889***********999988776555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (798 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       501  (0.0279436); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.28s 00:00:00.93 Elapsed: 00:00:00.46
# Mc/sec: 5243.23
//
Query:       EPX74661.1  [L=325]
Description: anion transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.5e-55  184.4   2.2    6.3e-17   61.3   0.1    3.1  3  Mito_carr  Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.3   0.1   3.5e-21   6.3e-17       3      96 ..      26     123 ..      24     124 .. 0.93
   2 !   60.8   0.1   4.9e-21   8.7e-17       4      96 ..     132     227 ..     129     228 .. 0.88
   3 !   61.0   0.1   4.4e-21   7.9e-17       4      95 ..     233     321 ..     231     323 .. 0.96

  Alignments for each domain:
  == domain 1  score: 61.3 bits;  conditional E-value: 3.5e-21
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS....HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCTT CS
   Mito_carr   3 lsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaa....ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllkk 96 
                 l+++  +++Gg+a+++a+++t+P++++Ktr+q+q++ +k   s++    + +++k i+k+eG+rgl rGl+ + + +   +++++++y+ ++ +l+++
  EPX74661.1  26 LGPVMGFVSGGVAACGAVTLTNPFEIIKTRFQLQGQLTKVDASKNiyktVPQAFKLILKHEGIRGLQRGLGTAYVYQLFLNGCRLGFYDPIRSFLNRN 123
                 5677789**************************9999888888878888999*****************************************99976 PP

  == domain 2  score: 60.8 bits;  conditional E-value: 4.9e-21
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCS...STTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCTT CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkks...skksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllkk 96 
                 sv+ ++l+G+ +g +++l+  P+ ++Ktr+q+ +     +++ ++++i+d +k+i+ke+G+rg + G+ ++++r+++ sa+++ +y+  kr++ ++
  EPX74661.1 132 SVAINVLSGAGSGFFGALFGSPFFLIKTRMQSYSPAfpiGEQYGYKHIFDGFKRIIKENGVRGIFVGADAAIIRTVSGSAVQLPIYNWAKRTIEHN 227
                 67889***************************777733334444444********************************************99776 PP

  == domain 3  score: 61.0 bits;  conditional E-value: 4.4e-21
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                 ++lk+l a++++g +  ++++ +d+v tr+ +qk+++ +++    ld++ k+++ eG+ +ly+G+++ l r+ap +  ++++ e++ +l+ k
  EPX74661.1 233 GTLKHLTASSISGFGVCCCMQVFDTVMTRMYNQKNKELYKN---PLDCILKTVRAEGFFALYKGFGAHLARIAPHTIFTLTFAEQTNKLFSK 321
                 6789*********************************9987...9********************************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (325 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       570  (0.0317921); expected 358.6 (0.02)
Passed bias filter:                      496  (0.0276647); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.28s 00:00:00.78 Elapsed: 00:00:00.44
# Mc/sec: 2194.67
//
Query:       EPX74662.1  [L=626]
Description: transcription factor [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.4e-21   75.5   0.2    7.1e-21   74.4   0.2    1.5  1  Fungal_trans  Fungal specific transcription factor domain
    1.6e-09   37.7  10.8    2.5e-09   37.1  10.8    1.3  1  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.4   0.2   7.9e-25   7.1e-21       3     191 ..     198     381 ..     196     419 .. 0.91

  Alignments for each domain:
  == domain 1  score: 74.4 bits;  conditional E-value: 7.9e-25
  Fungal_trans   3 rffsnfhpqfpilhkpsflpkt..ssenssksayaspllllailalGalfsesetkesnssltsesqefiafplraeilihedfsspssslwilqsL 97 
                    +f  +h  +p+lhkp fl+ +  ++e +++ + + + ll++++a + l s+ et++s++  ++e++ +  +pl+++  + ++ +  +++l++l +L
    EPX74662.1 198 EYFLRCHLFMPVLHKPMFLERYklFWEDPTQRNPSMTSLLFSMFASALLASPVETRISWNLGKDEKYLHTDYPLAFRYALAASDFLIDPDLNTLRAL 294
                   6******999********************************************************99999************************87 PP

  Fungal_trans  98 lllelyektssdralherhhgvavrlarslgLhrnpsyvgkkslwklweeeaesrrRlwwaaFylDktialklGrppllddsqinlpLPcdddd 191
                    + ++  + s++  +   ++g+  + a+ +gLhr+ s +g      l  e+ e+rrR+w ++ +lD++++  +G pp + +++ ++++P    d
    EPX74662.1 295 IIRQI-TFDSDSLLAPPSIVGLITQSAYFMGLHRDGSLYG------LNNEFTEIRRRIWSSVLILDIRVSELTGIPPRIQEDSYDTSFPRLLPD 381
                   76554.455555666777**********************......*******************************77*******98866554 PP

>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.1  10.8   2.8e-13   2.5e-09       1      35 [.      20      54 ..      20      59 .. 0.90

  Alignments for each domain:
  == domain 1  score: 37.1 bits;  conditional E-value: 2.8e-13
                SS-HHHHHCT---STSSSS-HHHHHCT..HHHCCCCT CS
     Zn_clus  1 haCdnCrkkKvKCdakkPaCsnCkkln..leCtfyse 35
                h+C  CrkkK KCd ++P CsnCkk++  + C  y +
  EPX74662.1 20 HSCLACRKKKLKCDHGRP-CSNCKKRGttYSCI-YLQ 54
                8*****************.********9999*9.544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (626 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       553  (0.0308439); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 4488.88
//
Query:       EPX74663.1  [L=394]
Description: L-saccharopine oxidase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-24   87.7   0.0    5.5e-23   82.1   0.0    2.0  1  DAO            FAD dependent oxidoreductase
  ------ inclusion threshold ------
      0.011   15.0   0.0       0.17   11.1   0.0    2.1  2  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
      0.013   14.9   0.0      0.021   14.3   0.0    1.2  1  UPF0524        UPF0524 of C3orf70
      0.034   13.2   0.0       0.11   11.5   0.0    1.7  2  GIDA           Glucose inhibited division protein A
      0.059   13.4   0.0        9.3    6.2   0.0    2.3  2  NAD_binding_9  FAD-NAD(P)-binding
       0.09   13.0   0.0       0.18   12.0   0.0    1.5  1  NAD_binding_8  NAD(P)-binding Rossmann-like domain
       0.15   11.1   0.1        7.3    5.5   0.0    2.4  3  Lycopene_cycl  Lycopene cyclase protein


Domain annotation for each model (and alignments):
>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.1   0.0   2.2e-26   5.5e-23       3     351 ..       6     348 ..       4     349 .. 0.71

  Alignments for each domain:
  == domain 1  score: 82.1 bits;  conditional E-value: 2.2e-26
                 EEECTSHHHHHHHHHHHHTT....EEEEESSSSTTS.SGGGSSEEEEESSSSTHHSTHHHHHHHHHHHHHHHHHHHHHSSTTSEEEEEEEEEESSHHHH CS
         DAO   3 viiGGGiiGlstAyeLarrg....Vtllekgdiags.gaSgrnsgllhsglrylpeaselarlslealeelreleeelgididyrrtGllslaadeeel 96 
                 +i+G G++Gls A +La++     ++ ++++  ++s  a     +++++ +++ ++     +l+lea++ +r  +        y+++G ls+ +    +
  EPX74663.1   6 LIVGCGVFGLSSAVDLAKQRvfdrIVAIDAEAVPSSmSAANDLNKIVRPEYADIKYM----KLALEAMDSWRSNSPV---SSAYHESGRLSINS----K 93 
                 8****************8866789*******9999557777777*******999987....**********666643...356*********64....6 PP

                 HHHHHHHHHHHHTTTTEEEEEHHHHHHHSTTSTTTSEEEEETTEEEEEHHHHHHHHHHHHHHTT-EEEESECEEEEEEEETCEEEEEEECT.EEEEEEE CS
         DAO  97 ealdkllallleagldaelldaeevrelepalpgllgalfypdtgqvdpakltaalaraaealGveilegtevtgleeedgkvwgverttp.gendaad 194
                 +  +++++++++a+l+ +ll ++ +++l++  +++++   +p+   +  a l   + + + ++++      e+ +        + v  +t+ g++ +ad
  EPX74663.1  94 DPNRRQFDSVSQANLR-KLLGKDALMDLKS-PDEIRK--KFPT--FLSNAPLNEDISAVFNERAGYASAS-EAAS--------AAV--ETEdGSVIQAD 175
                 6677788888777775.5888887777774.245665..4666..4456666666666666664444443.3333........234..33446664469 PP

                 EEEE--GGGHH.HHHTTCTTTSEEEEEEEEEEEEEECCTHSTGSGCSEEEEEEEETTTTEEEEEE..TTSEEEEEESSE..................EE CS
         DAO 195 avVnaaGawsd.llgllkeldlpispvrgqvlvlkplseklvspaailpvpetdddgrgvyvtpr..kdgrvlvGgtad..................ee 272
                 ++ +a Ga+ +  +   ++     + v +  l +++ ++++++ +   ++p ++ d ++ y++p+  k+  +++ + ++                  ++
  EPX74663.1 176 TILLAIGAYMNaYV---HTD----RRVIAKGLPVAHMQLTEDEYNHYKNIP-IVFDPDVAYIFPPdpKSKLLKFSSAGYeyvyntrtrynesiitsiPT 266
                 9********87655...555....444444455544444333322444455.55555555666643334445565555567788888888888887645 PP

                 TTCSSTSCSHHHHHHHHHHHHHHSGGGCG..EEEEEEEEEE.ETTSSEEEEEEETEEEEEEEEECTTTHHHHHHHHHHHHHH CS
         DAO 273 sgdddpevdeedidellealrklfPqlgd..vlrkwaGlrp.lpdglpligetpgvkglylatGhsghGltlapatGkllae 351
                    +++++++ + + +++ lr ++P+l+d  ++++  +    + d  +li++ pg+++++++ G sgh++++ p +Gk++++
  EPX74663.1 267 TPSQYTDIPDYAKESIYRFLRMYLPELADrpLEKCKMCWISdTSDSEFLIDKLPGTDNVLIVNGDSGHAFKFLPNIGKYVTQ 348
                 555556788889999***********855449999999888689********999************************997 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0     0.049   1.2e+02       3      23 ..       5      25 ..       3      63 .. 0.78
   2 ?   11.1   0.0   6.5e-05      0.17     190     240 ..     135     186 ..     111     206 .. 0.79

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.049
                 EEEE--SHHHHHHHHHHHHHT CS
                 xxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2  3 vvviGgGpAGlaaaltlaqag 23
                 ++++G G+ Gl+ a +la++ 
   EPX74663.1  5 CLIVGCGVFGLSSAVDLAKQR 25
                 578999999999999988853 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 6.5e-05
                  HHHHHHTTEEEEESCEEEEEEETTE.EEEEEETTSCEEEESEEEE-S-EEES CS
                  xxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 190 eealekeGvevklgtsvkeidgnge.klevvledgeeidadlvvvavGvrps 240
                   +a  +e++  ++++++  + + +  ++ v++edg++i+ad++++a+G   +
   EPX74663.1 135 SNAPLNEDISAVFNERAGYASASEAaSAAVETEDGSVIQADTILLAIGAYMN 186
                  55555667777777777655555554556*******************8665 PP

>> UPF0524  UPF0524 of C3orf70
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0     8e-06     0.021      53     125 ..     247     319 ..     240     335 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 8e-06
     UPF0524  53 kyvyqpltsveqlpstavpaapsektdtidlsislaerflklapsfkapllpespkycvisdlfiddyvvkri 125
                 +yvy++ t++++   t++p++ps++td  d +   + rfl++     a   +e+ k c isd    ++++ ++
  EPX74663.1 247 EYVYNTRTRYNESIITSIPTTPSQYTDIPDYAKESIYRFLRMYLPELADRPLEKCKMCWISDTSDSEFLIDKL 319
                 7*****************************************9888899999*********987777776665 PP

>> GIDA  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.33   8.4e+02       2      23 ..       5      26 ..       4      42 .. 0.86
   2 ?   11.5   0.0   4.4e-05      0.11     126     166 ..     159     199 ..     125     216 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.33
                EEEE-SSHHHHHHHHHHHHTT- CS
        GIDA  2 viViGgGhAGceAAlaaarlGa 23
                + ++G G  G+  A+ +a+  +
  EPX74663.1  5 CLIVGCGVFGLSSAVDLAKQRV 26
                789**************99765 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 4.4e-05
                 TEEEEEEETTS-EEEECEEEE--TT-BT-EEEETTEEEESS CS
        GIDA 126 kkvkgvvtedgetikakavviatGtflkgkihigekelsaG 166
                    ++v tedg++i+a+++ +a G+++++ +h+ ++ +++G
  EPX74663.1 159 AASAAVETEDGSVIQADTILLAIGAYMNAYVHTDRRVIAKG 199
                 5567799**************************99999988 PP

>> NAD_binding_9  FAD-NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0     0.009        23       2      20 ..       7      25 ..       6      76 .. 0.85
   2 ?    6.2   0.0    0.0036       9.3     128     154 ..     156     182 ..     127     184 .. 0.73

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.009
  NAD_binding_9  2 ivGaGprGlavlerLlara 20
                   ivG+G+ Gl+ +  L++++
     EPX74663.1  7 IVGCGVFGLSSAVDLAKQR 25
                   9***************996 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.0036
  NAD_binding_9 128 eeradgqavlladgaslaadaVvLAlG 154
                    + +a+++av ++dg+ ++ad + LA+G
     EPX74663.1 156 ASEAASAAVETEDGSVIQADTILLAIG 182
                    33455679******************9 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   7.1e-05      0.18       1      39 [.       7      47 ..       7      63 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 7.1e-05
                   EE--SHHHHHHHHHHHCCTE..EEEEE-SSSSSSGGG-EEC CS
  NAD_binding_8  1 IvGaGlsGlvaAylLakagf..dvlllekrdrlGGraasye 39
                   IvG G++Gl+ A  Lak+++  +++ +++   ++  +a ++
     EPX74663.1  7 IVGCGVFGLSSAVDLAKQRVfdRIVAIDAEAVPSSMSAAND 47
                   9****************988788999999988876666555 PP

>> Lycopene_cycl  Lycopene cyclase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.0    0.0029       7.3       3      34 ..       6      37 ..       5      74 .. 0.86
   2 ?    1.9   0.0     0.037        94     171     214 ..     114     161 ..     107     167 .. 0.81
   3 ?    1.6   0.0     0.043   1.1e+02     106     142 ..     148     184 ..     126     207 .. 0.78

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0029
  Lycopene_cycl  3 vviGaGpAglslAarlteakpglkvvlieasp 34
                   +++G+G  gls A  l++++   ++v i+a +
     EPX74663.1  6 LIVGCGVFGLSSAVDLAKQRVFDRIVAIDAEA 37
                   69**************9999999999998753 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.037
  Lycopene_cycl 171 kmvlMDfrveqkl..kgltFlYalPldsd..rllvEeTelaskpeLpa 214
                    k  lMD ++++++  k +tFl   Pl++d   ++ E   +as+ e   
     EPX74663.1 114 KDALMDLKSPDEIrkKFPTFLSNAPLNEDisAVFNERAGYASASEAAS 161
                    5679****999998899*********8863378999999999876555 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.043
  Lycopene_cycl 106 eakvesveeeeageslvvleggrkirarlvvdargla 142
                    + ++  + ++ea+   v +e+g  i+a +++ a g+ 
     EPX74663.1 148 NERAGYASASEAASAAVETEDGSVIQADTILLAIGAY 184
                    5566667778888999**************9999964 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (394 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       498  (0.0277762); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 2870.40
//
Query:       EPX74664.1  [L=496]
Description: succinate-semialdehyde dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.2e-154  514.4   0.1   2.5e-154  514.2   0.1    1.0  1  Aldedh    Aldehyde dehydrogenase family
  ------ inclusion threshold ------
       0.13   11.9   0.0       0.25   10.9   0.0    1.4  1  SMC_ScpB  Segregation and condensation complex subunit ScpB


Domain annotation for each model (and alignments):
>> Aldedh  Aldehyde dehydrogenase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  514.2   0.1  2.8e-158  2.5e-154       1     462 []      29     491 ..      29     491 .. 0.97

  Alignments for each domain:
  == domain 1  score: 514.2 bits;  conditional E-value: 2.8e-158
                 EET-SSSE.EEEEETTTCEEEEEEE-B-HHHHHHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHTHHHHHHHHHHHH---HHHHHHHHHHHHHHHH CS
      Aldedh   1 wveseset.ievinPatgeviakvpaataedvdaavaaAkeafkawaklpaeeRaeiLrkaadlleerkeelaeletletGkplaearaeveeaidvlr 98 
                 w +s+s++ + v nPa+ ++i+kv+++t ++ ++ ++aA++ fka+++++  +R+e+L ++a+l+ee+ke+l++++tle+Gkpl++a+ ev+ +i +++
  EPX74664.1  29 WFTSNSKKsFSVENPANTQEIGKVTDMTVDETKKSIEAAANGFKAYKNTTHVQRSEMLTRWATLMEENKEDLVKMLTLENGKPLSHADMEVSTSIGYIK 127
                 666777555****************************************************************************************** PP

                 HHHHHHHHHSEEEEEEC..TTEEEEEEEEE-SEEEEEE-SSSCCHHHHHHHHHHHHTT-EEEEEE-TTSHHHHHHHHHHHHHTTS-TTSEEE--SS.TC CS
      Aldedh  99 yyaelaeklegevlpss..egklalvrrePlGvvgaItPWNfPlllaawklapalaaGNtvvlKPaeetplsalllaelfeeaglPkgvlnvvtgs.gs 194
                 +ya++a ++ g+++pss  ++++++++++P+G+ g+ItPWNfP +++++k  +alaaG+++v+ Pa+ tp s+l l++l++eag+P+gv+nv+t+s  s
  EPX74664.1 128 WYAGEAVRVFGDIAPSSlqMNNFIMSVKQPVGISGLITPWNFPSAMITRKGGAALAAGCSIVIMPATSTPYSCLGLVKLAQEAGFPNGVINVITTSnVS 226
                 ***************96679*************************************************************************877579 PP

                 CHHHHHHH-TTESEEEEES-HHHHHHHHHHHHCTTSEEEEEE---EEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHH CS
      Aldedh 195 evgealvehpevdkvsftGstevgrkiakaaaknlkrvtlElGGknplivledaDldkaveaivkgafgnaGQvCiaasrllvqesiydefveklveaa 293
                 e g++l+++p ++k+sftGst+vg+ ++ ++a+++k+v++ElGG++p+iv++d  +d+av+++ +  f++aG+vC++++r++++++iy+ef++kl+e++
  EPX74664.1 227 EHGKELTTNPLIRKISFTGSTNVGKILMGQSASTVKKVSMELGGNAPFIVFPDFPIDQAVDSLCNIKFFSAGEVCVCPNRVYLHKDIYEEFTKKLLEKV 325
                 *************************************************************************************************** PP

                 HT--BS-TTSTT-SB---SSHHHHHHHHHHHHHHHHTTSEEEE-TTE.SB-SSSTTEE--EEEES-TTTSHHHHS---SSEEEEEEESSHHHHHHHHHS CS
      Aldedh 294 kklkvgdpldedtdvGPliseaqlekvekyveeakeegaklllGgereeaglekgyfvePtvlanvtpdmriaqeEiFGPVlsvikfkdeeeaieiaNd 392
                 k++kvgd+ld++t +GPlis++  +k+ +++e+ +++gakll Gg  ++  ++ gyf+ePtvlan+++dm +a+eE+FGP++s+++f+++++++e aNd
  EPX74664.1 326 KTIKVGDGLDPSTGLGPLISKQGCDKMASHIEDSVAKGAKLLAGG--KRITDKGGYFYEPTVLANLNHDMIVACEETFGPLISLFQFENVDQVLERAND 422
                 *********************************************..56677888******************************************** PP

                 SSEESEEEEE-SBHHHHHHHHHHS-SSEEEESSSST--TTTSEB--CGGGEES-BSHHHHHHHTEEEEEE CS
      Aldedh 393 teyGLaagvftkdleraervaerleaGnvyiNdsttgaaealpfgGvkqSglGreggkegleeytevktv 462
                 te+GLa++vf+kd++++ +va++le+G v+ N   + ++ +  fgG+kqSg+G+e+g++g+ee++ +k v
  EPX74664.1 423 TEVGLAGYVFSKDVSTLVHVAKELEVGLVGANIELVDEPFM-SFGGIKQSGFGKEAGRHGVEEFMIIKEV 491
                 **********************************7666666.***********************99976 PP

>> SMC_ScpB  Segregation and condensation complex subunit ScpB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   2.8e-05      0.25       8      94 ..      38     125 ..      38     128 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 2.8e-05
    SMC_ScpB   8 fvageplsleeLakilelskeeveealeeLkeeyeeedrglelvev..aggyrlvtkpelaevvkklvkekkktrLsqaaletLaiIay 94 
                 f+ ++p + +e+ k+++++ +e+++ +e+ ++ +++ ++  ++++     ++   ++++ +++vk l+ e + + Ls+a +e+   I y
  EPX74664.1  38 FSVENPANTQEIGKVTDMTVDETKKSIEAAANGFKAYKNTTHVQRSemLTRWATLMEENKEDLVKMLTLE-NGKPLSHADMEVSTSIGY 125
                 677899***************************99988888887651168999999************99.99*********9888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (496 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       620  (0.0345808); expected 358.6 (0.02)
Passed bias filter:                      545  (0.0303977); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.30s 00:00:00.97 Elapsed: 00:00:00.52
# Mc/sec: 2877.08
//
Query:       EPX74665.1  [L=374]
Description: histone acetyltransferase Hat1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.7e-23   81.7   0.1    2.6e-22   79.8   0.1    2.0  1  Hat1_N           Histone acetyl transferase HAT1 N-terminus
     0.0035   17.0   0.2     0.0061   16.2   0.2    1.3  1  MOZ_SAS          MOZ/SAS family
     0.0098   15.8   0.0      0.017   15.0   0.0    1.4  1  Acetyltransf_10  Acetyltransferase (GNAT) domain
  ------ inclusion threshold ------
      0.028   14.6   0.0      0.047   13.9   0.0    1.4  1  Acetyltransf_1   Acetyltransferase (GNAT) family


Domain annotation for each model (and alignments):
>> Hat1_N  Histone acetyl transferase HAT1 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.8   0.1   5.8e-26   2.6e-22       1     160 []       7     149 ..       7     149 .. 0.85

  Alignments for each domain:
  == domain 1  score: 79.8 bits;  conditional E-value: 5.8e-26
                 GEEEHHHHEEEEEESSS.EEE.........E--S--HHHHTTTTEEESEES-EEEEEEETTT--EEEEEE-SEE--.STTS-..-HHHHHHTTS-T..E CS
      Hat1_N   1 wtvdanealkiklvrseedleeeektksesfhPeftyqiFgeeetIfGYkdLkInlyfaagslkpylkvsyseklkdkskte.kdvekklkeflpeeaf 98 
                 w+ +ane+++i l++++ d++        +fhP+fty+iFg++e  +GYk+L+I++++   s++p lkv+ys++l ++s  e ++v ++l+ ++ ++ +
  EPX74665.1   7 WIHNANECISIVLINEKGDID-------CKFHPTFTYSIFGDSEVLYGYKNLNIEIQYVLPSMTPELKVTYSDRLAPESGVEpTNVDQTLSIYMRDDRV 98 
                 899****************99.......48*********************************************999999888********9888654 PP

                 S-HHHHHHHHHHHH.H--GGSEEEEEETTEE..EEEEEEESSSHHHHHHHHHHTHHHHHHST CS
      Hat1_N  99 kskeeFekaleekaksfkppGelihsytrekkefeiykasladpavrelhrrlqifvllFIE 160
                        ++le  +    +p    +s++++k  f i k++ +d +  ++++ lq+f llFIE
  EPX74665.1  99 ------PENLEPVN-IRDIPVLESYSFDERK--FCILKSKPSDIG--AVMQYLQLFSLLFIE 149
                 ......45553222.3345545555677776..*****9996665..5799**********9 PP

>> MOZ_SAS  MOZ/SAS family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.2   1.4e-06    0.0061      24      98 ..     135     218 ..     114     224 .. 0.74

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.4e-06
     MOZ_SAS  24 lycqnLcllaklFldhktlyydvep.FlfYvlteadeegahivGy......F..skekesaeeynlaCilvlPpyqrkgyGkll 98 
                  + q L l++ lF++  + +   +p ++ Y+l+e ++e++ + Gy      +   kek+   +  ++  l+lPp+q++g+G+ l
  EPX74665.1 135 AVMQYLQLFSLLFIEGGSFIDIFDPkWTIYLLYEIKDEQYYLRGYctaydyYkwDKEKTDGVRPRISQFLILPPFQKEGHGSRL 218
                 6779999********9998766654399*******999877666533323242246776677889****************877 PP

>> Acetyltransf_10  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   3.8e-06     0.017      52      99 ..     198     245 ..     153     264 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 3.8e-06
  Acetyltransf_10  52 shisllfVdpeyrgqGigkaLleaveeeaekdgikl.eltvnaspyavp 99 
                       +is + + p +++ G g++L +a+ +++  +++k+ e++v+ s++a +
       EPX74665.1 198 PRISQFLILPPFQKEGHGSRLYNAIVNNF-LQDPKVlEFSVEDSSEAFD 245
                      39**************************9.5557777*****9997754 PP

>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0     1e-05     0.047      40      96 ..     171     231 ..     141     253 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1e-05
                     ETTE...EEEEEEEEEEET.....TSTTEEEEEEEEESGGGTTSSHHHHHHHHHHHHHHHTTESE CS
  Acetyltransf_1  40 edge...liGfisllkipd.....ekggvayieslaVspeyrgkGlGsaLlealeerareegikk 96 
                     +  e   l G+++++ ++      ++g +  i ++ + p +++ G Gs+L++a++  +++    k
      EPX74665.1 171 D--EqyyLRGYCTAYDYYKwdkekTDGVRPRISQFLILPPFQKEGHGSRLYNAIVNNFLQD--PK 231
                     2..235689999999999999999999999999*********************9888877..44 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (374 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       655  (0.036533); expected 358.6 (0.02)
Passed bias filter:                      415  (0.0231469); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 2589.15
//
Query:       EPX74666.1  [L=591]
Description: actin binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.6e-20   72.7   0.3    3.2e-20   71.7   0.3    1.5  1  WD40_4         Type of WD40 repeat
    1.9e-18   66.5   9.3    3.9e-06   27.5   0.2    4.9  5  WD40           WD domain, G-beta repeat
    2.9e-13   49.5   0.1    6.2e-13   48.4   0.1    1.5  1  DUF1899        Domain of unknown function (DUF1899)
    9.9e-05   22.6   0.1        1.2    9.4   0.0    3.9  4  ANAPC4_WD40    Anaphase-promoting complex subunit 4 WD40 doma


Domain annotation for each model (and alignments):
>> WD40_4  Type of WD40 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.7   0.3   7.1e-24   3.2e-20       1      43 [.     321     362 ..     321     363 .. 0.98

  Alignments for each domain:
  == domain 1  score: 71.7 bits;  conditional E-value: 7.1e-24
      WD40_4   1 iepisftVPRkskeeFqdDlyPdtagtepaltAeeWlsGknke 43 
                 iepisf+VPR+s e +q+D+yP++++++p+l+A+eW+sGk+++
  EPX74666.1 321 IEPISFIVPRRS-EAYQSDIYPPAPSGKPSLSADEWFSGKDAP 362
                 8***********.****************************97 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.2   8.8e-07    0.0039       7      38 .]      53      86 ..      49      86 .. 0.87
   2 !   27.5   0.2   8.7e-10   3.9e-06       3      38 .]     102     139 ..     101     139 .. 0.86
   3 !   21.4   0.0   7.2e-08   0.00032      14      38 .]     156     180 ..     148     180 .. 0.89
   4 ?    1.1   0.1      0.19   8.5e+02       9      38 .]     192     227 ..     185     227 .. 0.55
   5 ?   -0.8   0.0      0.76   3.4e+03      24      36 ..     260     271 ..     249     273 .. 0.73

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 8.8e-07
                EESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS
        WD40  7 ltGH.ssvtslafspdgawl.asGsdDgtvriWd 38
                ++GH   v + +++p ++ + asG+dD ++++W+
  EPX74666.1 53 FRGHtAAVLDTDWNPCHDQVlASGGDDSKIMLWK 86
                79**777************62699*********6 PP

  == domain 2  score: 27.5 bits;  conditional E-value: 8.7e-10
                 EEEEEESSSS.EEEEEEETTSSEEE.EEETTSEEEEEE CS
        WD40   3 clrtltGHss.vtslafspdgawla.sGsdDgtvriWd 38 
                 ++ +ltGH+  v +++f+p+ a ++ s+s D+t+++Wd
  EPX74666.1 102 PVAHLTGHTRkVGHVQFHPSAANVLaSSSADKTIKLWD 139
                 6899****445************7526689*******9 PP

  == domain 3  score: 21.4 bits;  conditional E-value: 7.2e-08
                 EEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  14 tslafspdgawlasGsdDgtvriWd 38 
                  s++f+ dg++l+s ++D+++riWd
  EPX74666.1 156 QSISFNADGNLLVSTGRDKKIRIWD 180
                 5889*********9999*******9 PP

  == domain 4  score: 1.1 bits;  conditional E-value: 0.19
                 SS.SS.....EE..EEEEETTSSEEE.EE.ET..TSEEEEEE CS
        WD40   9 GH.ss.....vt..slafspdgawla.sG.sd..DgtvriWd 38 
                 GH +      v+  sl      + +a +G s+  D+ + +Wd
  EPX74666.1 192 GHaGAknsrsVWlgSL------NRIAtTGfSKmsDRQLALWD 227
                 5642233455322255......666636763244*******9 PP

  == domain 5  score: -0.8 bits;  conditional E-value: 0.76
                 EEEEE.ETTSEEEE CS
        WD40  24 wlasG.sdDgtvri 36 
                 +l +G + Dg++r 
  EPX74666.1 260 YL-AGkG-DGNIRY 271
                 45.6988.****96 PP

>> DUF1899  Domain of unknown function (DUF1899)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.4   0.1   1.4e-16   6.2e-13      28      66 .]       7      45 ..       4      45 .. 0.97

  Alignments for each domain:
  == domain 1  score: 48.4 bits;  conditional E-value: 1.4e-16
     DUF1899 28 sknawdsnlikaNpkflAvnwessGGGafaVlplnktGk 66
                s+nawdsnl++aNp +l+vnw+s+ GGa+aV+pl+++Gk
  EPX74666.1  7 SNNAWDSNLLSANPFYLSVNWNSGAGGAIAVIPLENRGK 45
                899***********************************8 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.065   2.9e+02      39      70 ..      58      90 ..      51     106 .. 0.80
   2 !    6.3   0.0    0.0026        12      36      77 ..     108     150 ..      96     155 .. 0.82
   3 !    9.4   0.0   0.00028       1.2      42      79 ..     156     193 ..     151     204 .. 0.86
   4 ?   -2.8   0.0       1.8   7.9e+03      55      70 ..     262     277 ..     251     287 .. 0.72

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.065
  ANAPC4_WD40 39 sevrsLaWkp.dgklLavaysdgevrlldaesg 70
                   v +  W+p  +++La + +d+++ l ++ + 
   EPX74666.1 58 AAVLDTDWNPcHDQVLASGGDDSKIMLWKVPED 90
                 56777789984589***********99988665 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0026
  ANAPC4_WD40  36 kedsevrsLaWkpd.gklLavaysdgevrlldaesgkvvhsls 77 
                  ++ ++v +++++p+  ++La + +d +++l d e+g    +l+
   EPX74666.1 108 GHTRKVGHVQFHPSaANVLASSSADKTIKLWDCEKGIARVTLP 150
                  67889999999997358******************97766665 PP

  == domain 3  score: 9.4 bits;  conditional E-value: 0.00028
  ANAPC4_WD40  42 rsLaWkpdgklLavaysdgevrlldaesgkvvhslsvk 79 
                  +s++++ dg+lL+    d ++r+ d  + k v+ ++ +
   EPX74666.1 156 QSISFNADGNLLVSTGRDKKIRIWDPRTDKPVSVSNGH 193
                  689************************99999876655 PP

  == domain 4  score: -2.8 bits;  conditional E-value: 1.8
  ANAPC4_WD40  55 vaysdgevrlldaesg 70 
                   +  dg++r ++ e+ 
   EPX74666.1 262 AGKGDGNIRYYELEND 277
                  4678999999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (591 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1673  (0.0933125); expected 358.6 (0.02)
Passed bias filter:                      502  (0.0279993); expected 358.6 (0.02)
Passed Vit filter:                       102  (0.00568911); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.81u 0.31s 00:00:01.12 Elapsed: 00:00:00.48
# Mc/sec: 3717.86
//
Query:       EPX74667.1  [L=493]
Description: haspin protein kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.2e-81  271.6   2.8    1.2e-80  271.2   2.8    1.1  1  Haspin_kinase  Haspin like kinase domain
  ------ inclusion threshold ------
      0.032   13.6   0.1        1.6    8.0   0.0    2.3  2  Pkinase        Protein kinase domain


Domain annotation for each model (and alignments):
>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  271.2   2.8   1.3e-84   1.2e-80       8     346 ..      42     463 ..      36     483 .. 0.88

  Alignments for each domain:
  == domain 1  score: 271.2 bits;  conditional E-value: 1.3e-84
  Haspin_kinase   8 eslksrssqsslkhktshssLqkf........................................sssssessssnkislPvkdqvsrdkikkk... 60 
                    ++l++r s+ slk    +ss+ k                                         ++++++s+ +++i +P   +   ++ ++k   
     EPX74667.1  42 NELNKRRSSFSLKID-KKSSIGKKdednsvkslpdavdkvdgrrsksnlrlvptiivpsrgrdiNETNNNSTVNTSIYKPKFASQINTEFQEKssk 136
                    566666666666643.235666656666666669999999999999999999*********99999999999999*****7554444444444100 PP

  Haspin_kinase  61 .lrnsesllslnsqeevkdfdevilsqilelckikkilneadlasllndseklssevyqtkekdkevvlKvipl.........evledvtiskels 146
                      ++ e ll+l+ q+ +++f ++i+s +  + ki               +e+++sev++++e d+++vlK++p+         +++++++i+k ls
     EPX74667.1 137 tSTHLEYLLGLADQQMPVSFRDYIKSIKSPVYKI---------------GEASYSEVFKVEE-DEPIVLKIMPFgkrnqircaDIINELKITKSLS 216
                    04455679******************99999999...............************9.*****************************8776 PP

  Haspin_kinase 147 l....kelkslklvkgtypglllllqdkvlkek......pdfyseqqlflvlllkdkGtdLeevklkswkqalsifwqivkiLyvaEtkfeFEHRd 232
                         ++l+   +vkgtyp+ l+  +dk+  +k      pd y++ ql+++l+l+++GtdLe+v+l++w +a+ if+++vkiL+++E +feFEHRd
     EPX74667.1 217 KlegyVGLRRAIIVKGTYPSALIEEWDKYDIQKesenerPDRYHSSQLYCILCLNHSGTDLEHVELSNWFEAWGIFYKTVKILSIGERNFEFEHRD 312
                    55999999*********************999999************************************************************* PP

  Haspin_kinase 233 LhldniLvdkn...................................lnvtlidlklsRle.ssegkvlytrlddpllFqGggDyqfeiYrlMrsll 292
                    +h++niL++k                                    l++tlid++l+R++ ss +  +++++ddp+lF G+gDyqf+iYrlM++++
     EPX74667.1 313 MHWGNILINKRndedlsclldevsfdefhssdtsstlsersftsdsLEITLIDFTLARMRhSSLSSPIFNEFDDPDLFVGQGDYQFDIYRLMSKVT 408
                    **********99************************************************8889999***************************** PP

  Haspin_kinase 293 skswaefePrtNllwlhyLavkLlkkkn.kklnseaekrvkerleklaklldpaa 346
                    + +w+ ++P+tN+lw+hyL++++l kk+  k+    ek   erl+ l  ll+p +
     EPX74667.1 409 KGQWDGYFPKTNILWIHYLLHQILYKKTiPKPRDPREKSLMERLKDLYTLLEPFQ 463
                    ************************999998888888888888*********9866 PP

>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.0   0.00018       1.6       6      56 ..     169     216 ..     165     240 .. 0.91
   2 ?    3.2   0.0    0.0054        49     119     135 ..     308     324 ..     278     385 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.00018
                 EEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS CS
     Pkinase   6 klGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklk 56 
                 k+Ge s+++V+k+    +++ +++K++   k+++ +  ++++E+ki k+l+
  EPX74667.1 169 KIGEASYSEVFKVE---EDEPIVLKIMPFGKRNQIRCADIINELKITKSLS 216
                 8***********98...6999***************************997 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.0054
                 EE-SS-SGGGEEEETTT CS
     Pkinase 119 iiHrDlKpeNiLidekg 135
                 + HrD+   NiLi++++
  EPX74667.1 308 FEHRDMHWGNILINKRN 324
                 67************643 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (493 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       568  (0.0316805); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.23s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 3562.04
//
Query:       EPX74668.1  [L=34]
Description: hypothetical protein SOCG_05231 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (34 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       216  (0.0120475); expected 358.6 (0.02)
Passed bias filter:                      156  (0.00870099); expected 358.6 (0.02)
Passed Vit filter:                         8  (0.000446204); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.26s 00:00:00.58 Elapsed: 00:00:00.40
# Mc/sec: 254.41
//
Query:       EPX74669.1  [L=411]
Description: LEA domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-29  101.5   9.6    2.7e-09   37.2   0.0    6.8  6  Ish1      Putative stress-responsive nuclear envelope protein
     0.0017   18.4   2.9        4.3    7.5   0.1    4.2  4  SAM_2     SAM domain (Sterile alpha motif)
     0.0031   17.2   0.0        3.7    7.4   0.0    3.3  3  SAP       SAP domain
  ------ inclusion threshold ------
      0.016   14.7   0.0         13    5.4   0.0    3.6  4  LEM       LEM domain


Domain annotation for each model (and alignments):
>> Ish1  Putative stress-responsive nuclear envelope protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.1   0.00033       1.5       2      21 ..      43      64 ..      43      71 .. 0.81
   2 !   37.2   0.0   6.1e-13   2.7e-09       1      34 [.     114     146 ..     114     146 .. 0.97
   3 !   11.1   0.0   8.4e-05      0.38       1      37 []     161     196 ..     161     196 .. 0.91
   4 !   13.2   0.0   1.8e-05     0.081       4      36 ..     229     260 ..     229     261 .. 0.94
   5 !   11.6   2.7     6e-05      0.27       2      35 ..     275     312 ..     274     313 .. 0.80
   6 !   16.8   0.0   1.4e-06    0.0061       2      22 ..     344     367 ..     344     382 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00033
        Ish1  2 dtWSdsdLkkWLdshGip..vs 21
                d+W    L ++L+shG++  ++
  EPX74669.1 43 DSWPQRKLDEFLKSHGVKslDA 64
                89***************96544 PP

  == domain 2  score: 37.2 bits;  conditional E-value: 6.1e-13
        Ish1   1 FdtWSdsdLkkWLdshGipvskaastRdeLlkla 34 
                 Fd WS+s+L +WL +h++ v + + tR++Ll+++
  EPX74669.1 114 FDAWSNSELSEWLIEHNFEV-PEPGTREQLLETV 146
                 9******************8.**********986 PP

  == domain 3  score: 11.1 bits;  conditional E-value: 8.4e-05
        Ish1   1 FdtWSdsdLkkWLdshGipvskaastRdeLlklardn 37 
                 F++WS++ L + Ld+ ++   + +++R++L  la+++
  EPX74669.1 161 FESWSTNLLVNLLDEKNVRI-PLGASREDLTILAKRY 196
                 99***************995.*********7777776 PP

  == domain 4  score: 13.2 bits;  conditional E-value: 1.8e-05
        Ish1   4 WSdsdLkkWLdshGipvskaastRdeLlklard 36 
                 WSd +L ++L + Gipv +  s R+ Ll  +++
  EPX74669.1 229 WSDGRLIDFLRERGIPV-SVLSPRETLLRNVYN 260
                 ****************8.9999******99986 PP

  == domain 5  score: 11.6 bits;  conditional E-value: 6e-05
        Ish1   2 dtWSdsdLkkWLdshGipvskaas.......tRdeLlklar 35 
                 d WS +dL  WL+ h                tR++L+++a+
  EPX74669.1 275 DGWSSEDLLRWLENHRTD---DSLystisynTRHDLIHTAK 312
                 89*************733...33344788999999999997 PP

  == domain 6  score: 16.8 bits;  conditional E-value: 1.4e-06
        Ish1   2 dtWSdsdLkkWLdshG.ip..vsk 22 
                 +tW++++Lk+ L+s+G ++  +++
  EPX74669.1 344 STWTEEELKEELESFGeLVpiPFN 367
                 7***************75535555 PP

>> SAM_2  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.28   1.2e+03       2      19 ..      43      60 ..      42      62 .. 0.84
   2 !    7.5   0.1   0.00097       4.3       2      19 ..     115     132 ..     114     156 .. 0.90
   3 ?    2.9   0.0     0.027   1.2e+02       2      18 ..     227     243 ..     226     247 .. 0.87
   4 !    4.9   0.2    0.0065        29       2      17 ..     275     290 ..     274     297 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.28
                GGHHHHHHHHHHHHTTTG CS
       SAM_2  2 eswsledvaeWLrsiglk 19
                +sw +  + e+L+s+g k
  EPX74669.1 43 DSWPQRKLDEFLKSHGVK 60
                578889999*****9976 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.00097
                 GGHHHHHHHHHHHHTTTG CS
       SAM_2   2 eswsledvaeWLrsiglk 19 
                 + ws+++++eWL +++++
  EPX74669.1 115 DAWSNSELSEWLIEHNFE 132
                 68*************996 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.027
                 GGHHHHHHHHHHHHTTT CS
       SAM_2   2 eswsledvaeWLrsigl 18 
                 + ws  ++ ++Lr+ g 
  EPX74669.1 227 HLWSDGRLIDFLRERGI 243
                 89***********9875 PP

  == domain 4  score: 4.9 bits;  conditional E-value: 0.0065
                 GGHHHHHHHHHHHHTT CS
       SAM_2   2 eswsledvaeWLrsig 17 
                 + ws+ed+ +WL++++
  EPX74669.1 275 DGWSSEDLLRWLENHR 290
                 57***********987 PP

>> SAP  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0         1   4.5e+03       2      17 ..     115     130 ..     114     132 .. 0.80
   2 !    5.9   0.0    0.0025        11       5      21 ..     230     246 ..     226     246 .. 0.81
   3 !    7.4   0.0   0.00082       3.7       2      17 ..     344     359 ..     344     360 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 1
                 TT--HHHHHHHHHHTT CS
         SAP   2 skltVaeLKeeLkkrG 17 
                   ++ +eL e L +++
  EPX74669.1 115 DAWSNSELSEWLIEHN 130
                 57999***99987765 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0025
                 -HHHHHHHHHHTT--TT CS
         SAP   5 tVaeLKeeLkkrGLpts 21 
                 +   L ++L++rG+p+s
  EPX74669.1 230 SDGRLIDFLRERGIPVS 246
                 555699*********97 PP

  == domain 3  score: 7.4 bits;  conditional E-value: 0.00082
                 TT--HHHHHHHHHHTT CS
         SAP   2 skltVaeLKeeLkkrG 17 
                 s++t  eLKeeL+++G
  EPX74669.1 344 STWTEEELKEELESFG 359
                 689***********98 PP

>> LEM  LEM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.74   3.3e+03      10      19 ..      50      59 ..      48      60 .. 0.78
   2 ?    4.4   0.0    0.0061        28       5      21 ..     117     133 ..     114     134 .. 0.88
   3 ?   -1.5   0.0      0.43   1.9e+03       6      21 ..     230     245 ..     229     249 .. 0.90
   4 ?    5.4   0.0    0.0029        13       6      19 ..     347     360 ..     344     363 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.74
         LEM 10 LreeLkkyGv 19
                L e Lk++Gv
  EPX74669.1 50 LDEFLKSHGV 59
                66779****8 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.0061
         LEM   5 LsDeeLreeLkkyGvsp 21 
                  s++eL e L+++++ +
  EPX74669.1 117 WSNSELSEWLIEHNFEV 133
                 59************975 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 0.43
         LEM   6 sDeeLreeLkkyGvsp 21 
                 sD  L++ L++ G+++
  EPX74669.1 230 SDGRLIDFLRERGIPV 245
                 89999999*****997 PP

  == domain 4  score: 5.4 bits;  conditional E-value: 0.0029
         LEM   6 sDeeLreeLkkyGv 19 
                 + eeL+eeL ++G+
  EPX74669.1 347 TEEELKEELESFGE 360
                 789**********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (411 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       593  (0.0330749); expected 358.6 (0.02)
Passed bias filter:                      505  (0.0281667); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 2788.40
//
Query:       EPX74670.1  [L=326]
Description: methyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.5e-48  162.5   0.1    1.1e-47  162.0   0.1    1.2  1  Methyltransf_16  Lysine methyltransferase
    4.8e-06   26.5   0.0    7.5e-06   25.9   0.0    1.2  1  Methyltransf_23  Methyltransferase domain
    5.9e-06   25.9   0.0    8.9e-06   25.4   0.0    1.3  1  MTS              Methyltransferase small domain
     0.0032   18.2   0.0     0.0063   17.2   0.0    1.6  1  Methyltransf_12  Methyltransferase domain
  ------ inclusion threshold ------
      0.011   15.5   0.0      0.019   14.8   0.0    1.3  1  Methyltransf_31  Methyltransferase domain
      0.042   13.6   0.0      0.065   13.0   0.0    1.2  1  DUF938           Protein of unknown function (DUF938)
      0.053   14.2   0.0       0.12   13.0   0.0    1.7  1  Methyltransf_25  Methyltransferase domain
      0.098   12.0   0.0       0.15   11.4   0.0    1.3  1  PrmA             Ribosomal protein L11 methyltransferase (Prm
       0.11   12.1   0.0       0.16   11.6   0.0    1.2  1  Cons_hypoth95    Conserved hypothetical protein 95
       0.14   11.5   0.0        0.2   10.9   0.0    1.3  1  Methyltransf_2   O-methyltransferase domain


Domain annotation for each model (and alignments):
>> Methyltransf_16  Lysine methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  162.0   0.1   6.2e-51   1.1e-47       7     172 ..     142     304 ..     138     306 .. 0.94

  Alignments for each domain:
  == domain 1  score: 162.0 bits;  conditional E-value: 6.2e-51
  Methyltransf_16   7 LkieedtgesigrkvWdaavvlvkylekklakelganelsklsvlELGsGtGlvGlavaellpeakviltDleellellkknielnknalkskv 100
                      L + e++gesi++++Wda+++l++ ++k+   e   ++ ++l+vlELG+G+G+ G++va+++p+a+v++tDle++l +l+ ni  n+++l++++
       EPX74670.1 142 LCFMEQMGESIAKHIWDAGIILSEKILKQE-PEWTLSDKKNLQVLELGAGCGILGISVASKYPNASVCMTDLEDALGILQLNIFENRHLLHNNI 234
                      7789*****************998888864.55778999******************************************************* PP

  Methyltransf_16 101 kvevLdWgeeleedllekeevDlilaaDcvYledslelLvkvLkellkkeskvlvaykkrreaekkFfklle 172
                      +++v  W  +++++l  ++++D+il++D++Y+ +s++ L++ Lk l+++++ ++v+ykkr+e+ek+F+++l 
       EPX74670.1 235 STDVFVWSSQIPPKL--QKRWDYILMSDVMYNDSSFSSLEAALKSLMQSQTRLFVSYKKRHENEKSFMDHLL 304
                      *************99..4669***********************************************9886 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9   0.0   4.2e-09   7.5e-06      19     133 ..     173     302 ..     162     317 .. 0.81

  Alignments for each domain:
  == domain 1  score: 25.9 bits;  conditional E-value: 4.2e-09
  Methyltransf_23  19 k....lraggrvLdiGcGtGillevl.ren.gfsvtgvDlspeaveiae............kakkaqkdqfdeqeaaepqgkfdlIvlrevleh 94 
                      +    ++++  vL++G+G Gil  +  +++  +sv++ Dl   a +i++            ++++ +++   +q  ++ q+++d+I +++v+++
       EPX74670.1 173 EwtlsDKKNLQVLELGAGCGILGISVaSKYpNASVCMTDLE-DALGILQlnifenrhllhnNISTDVFVWS-SQIPPKLQKRWDYILMSDVMYN 264
                      3344478899**********9866663555345*******5.6899999*9*********99999999999.999999**************** PP

  Methyltransf_23  95 vpdppellrqiatllkpgGylllseplaslkedrllldw 133
                        ++ +l + +++l+  +++l++s+   +++++++++d 
       EPX74670.1 265 DSSFSSLEAALKSLMQSQTRLFVSYKK-RHENEKSFMDH 302
                      *************************85.56777777662 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.0     5e-09   8.9e-06      27      82 ..     176     231 ..     166     289 .. 0.79

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 5e-09
                 CHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC.E CS
         MTS  27 lpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle.v 82 
                 l+++++ +vl lG+G G+lg+++a+++p+a+v ++d +  Al + + n+ +n++   
  EPX74670.1 176 LSDKKNLQVLELGAGCGILGISVASKYPNASVCMTDLE-DALGILQLNIFENRHLlH 231
                 66667889****************************86.689999988887775431 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   3.5e-06    0.0063       1      77 [.     185     263 ..     185     285 .. 0.79

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 3.5e-06
  Methyltransf_12   1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvelealdlldldgg...ssfDlvvasnvlh 77 
                      Le+G+G G l   ++ k p+++++ +D+  +     +  + +++ + +nn+  ++   +++ ++   + +D++++s+v+ 
       EPX74670.1 185 LELGAGCGILGISVASKYPNASVCMTDLEDALG-ILQLNIFENRHLLHNNISTDVFVWSSQIPPklqKRWDYILMSDVMY 263
                      8***************************98887.6666666666666666666666666555558999*********985 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   1.1e-05     0.019       2     126 ..     179     307 ..     178     322 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.1e-05
  Methyltransf_31   2 dkglrvlDlGCGtGeltfelaeelgpkaevvGiDiseea..ielArenaqklgldnveFeqgdiee.leklledekfDlilsnevlnaladpdk 92 
                      +k+l+vl+lG+G G l++  a   +p+a v   D +     ++l   + ++l  +n++  +  + + ++ +l+ ++ D+il  +v++  ++  +
       EPX74670.1 179 KKNLQVLELGAGCGILGISVA-SKYPNASVCMTDLEDALgiLQLNIFENRHLLHNNISTDVFVWSSqIPPKLQ-KRWDYILMSDVMYNDSSFSS 270
                      89*******************.679****99999887754478887788888888999999999998886667.89**********88888888 PP

  Methyltransf_31  93 ileeiervlkpggilliedpr...llaelpakveees 126
                          ++++++++++l +++ +    ++ + +++ +++
       EPX74670.1 271 LEAALKSLMQSQTRLFVSYKKrheNEKSFMDHLLQWC 307
                      8889999*********999984333333336665555 PP

>> DUF938  Protein of unknown function (DUF938)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   3.6e-05     0.065      24     139 ..     178     287 ..     166     294 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 3.6e-05
      DUF938  24 ktte.rvLEiasGtGqHAvffApalpnlkwqpsdqdeelresiaawadelalsnlkpPleldvtaevapvereapp.apasidailsinllHispwsav 120
                 ++++ +vLE+++G G   +  A++ pn+    +d ++ l  +i +      +   +  l+ +++++v  + +++pp  ++  d+il + +++    s+ 
  EPX74670.1 178 DKKNlQVLELGAGCGILGISVASKYPNASVCMTDLEDAL--GILQL----NIFENRHLLHNNISTDVFVWSSQIPPkLQKRWDYILMSDVMYN--DSSF 268
                 444459********************************9..67664....34444555666777777777777777478899****9999874..4566 PP

      DUF938 121 eglfagagellkkkavlvi 139
                  +l a++++l++++++l++
  EPX74670.1 269 SSLEAALKSLMQSQTRLFV 287
                 6777888888888888875 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   6.9e-05      0.12       1      73 [.     184     261 ..     184     283 .. 0.62

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 6.9e-05
                      EEEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTT......TEEEEESBCCGBSSSTTTEEEEEEEST CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeegl......nvefvqgdaedlpfedgsfDlvvssga 73 
                      vL+lG+G G l + +a ++++a+v ++D+ +++  + + ++ e++       + ++ + + +  p  +++ D++++s +
       EPX74670.1 184 VLELGAGCGILGISVASKYPNASVCMTDLEDAL-GILQLNIFENRHllhnniSTDVFVWSSQIPPKLQKRWDYILMSDV 261
                      9******************99*******97654.444433333221122212445555555555566667777777655 PP

>> PrmA  Ribosomal protein L11 methyltransferase (PrmA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   8.2e-05      0.15     160     208 ..     179     227 ..     166     261 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 8.2e-05
        PrmA 160 kegeevlDvGtGSGiLaia.aakLgakkvvavDiDevAvkvakeNaelNk 208
                 k++ +vl +G+G GiL i  a+k   ++v+ +D+++ A+ + + N+  N+
  EPX74670.1 179 KKNLQVLELGAGCGILGISvASKYPNASVCMTDLED-ALGILQLNIFENR 227
                 56669*************6378999999999**976.7777777777763 PP

>> Cons_hypoth95  Conserved hypothetical protein 95
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   9.1e-05      0.16      40     160 ..     179     297 ..     167     312 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 9.1e-05
                    HCC-EEEETT-TTSHHHHHHHHTT-SEEEEEES-HHHHHHHHHHHCCCT--TTTEEEEES-HHHHCTS.--SS-EEEEEEE.--SSSTTCH.HHHH CS
  Cons_hypoth95  40 iegarvLDlfaGsGalglEAlSRgakkavlvekdkeavkilkenleelkleeetaelkedaleallkl.akkkeefdivfl.DPPyakellieevl 133
                     ++ +vL+l aG G lg+  +S + + +v++   + a+ il+ n+ e +    ++++  d +   ++  +k +++ d++ + D  y+++ +   + 
     EPX74670.1 179 KKNLQVLELGAGCGILGISVASKYPNASVCMTDLEDALGILQLNIFENRHLL-HNNISTDVFVWSSQIpPKLQKRWDYILMsDVMYNDSSF-SSLE 272
                    56789*************************************9997666433.44444444433332213345677877643778888876.5555 PP

                    HHHHHTT-EEEEEEEEEEEECCSSS-- CS
  Cons_hypoth95 134 elleekkllkenalvvvetekekelpe 160
                    ++l+  +l++ ++ ++v ++k++e  +
     EPX74670.1 273 AALK--SLMQSQTRLFVSYKKRHENEK 297
                    5555..677777777777777766655 PP

>> Methyltransf_2  O-methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00011       0.2      65      96 ..     183     214 ..     137     267 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00011
                     EEEEET-TTSHHHHHHHHH-TT-EEEEEE-HH CS
  Methyltransf_2  65 slvDvGGGtGalakaivsayPtikvivfDlpe 96 
                     +++++G G G l   ++s+yP+ +v++ Dl +
      EPX74670.1 183 QVLELGAGCGILGISVASKYPNASVCMTDLED 214
                     4679*************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (326 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       590  (0.0329076); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 2399.63
//
Query:       EPX74671.1  [L=192]
Description: meiotically upregulated Mug22 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0054   16.3   4.2     0.0065   16.1   4.2    1.1  1  TMCO5     TMCO5 family


Domain annotation for each model (and alignments):
>> TMCO5  TMCO5 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   4.2   3.6e-07    0.0065      20     168 ..       7     155 ..       3     186 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 3.6e-07
       TMCO5  20 qslLrkiqekeetiqslereitkldsllereedeeenfsenekedalkeLeletaklekkneiLlkevveLqkkisrkeskqddleketlkqkleelkv 118
                 + l   i+e e+ +++l +e +    + + +++ +++  e+  +da++  ++e   l+++++iLl+    L ++   + ++ dd+e++ l+++   lk 
  EPX74671.1   7 NTLVDSIKEWESYMENLDDERATFGGISNMHQKGDLEKPESFAKDAFQYFDEENESLSRRKTILLRAKRRLCQQDL-LWKHCDDTEEKFLEEMIGLLKN 104
                 678899*****************************************************************77644.44467899999*********** PP

       TMCO5 119 klqkseescaeqekelakveedyqsvaqlCkdqallikk....Yqealrkmeee 168
                 +++++ ++c       +k++e +q   +  kd + +       Y  +l+ ++++
  EPX74671.1 105 HVERMLKFCRM---VCEKLSETFQTTMKVAKDFQDCKPSqewfYLYQLKYLKKQ 155
                 99999999987...8888899999999999999999877778844444444442 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1035  (0.0577277); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.28s 00:00:00.74 Elapsed: 00:00:00.45
# Mc/sec: 1284.82
//
Query:       EPX74672.1  [L=204]
Description: rho family GTPase Rho3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.5e-55  184.6   0.0    1.1e-54  184.4   0.0    1.0  1  Ras          Ras family
    1.2e-22   80.4   0.0    1.8e-22   79.8   0.0    1.2  1  Roc          Ras of Complex, Roc, domain of DAPkinase
    3.7e-10   39.5   0.0    5.5e-10   39.0   0.0    1.2  1  Arf          ADP-ribosylation factor family
    0.00082   19.4   0.0     0.0017   18.4   0.0    1.5  1  MMR_HSR1     50S ribosome-binding GTPase
     0.0025   17.2   0.0     0.0029   17.0   0.0    1.2  1  Gtr1_RagA    Gtr1/RagA G protein conserved region
      0.007   16.3   0.0          2    8.3   0.0    2.1  2  RsgA_GTPase  RsgA GTPase
     0.0093   15.4   0.0      0.013   14.9   0.0    1.2  1  SRPRB        Signal recognition particle receptor beta subuni
  ------ inclusion threshold ------
      0.054   13.9   0.0      0.098   13.0   0.0    1.7  1  AAA_16       AAA ATPase domain
       0.13   12.8   0.0       0.28   11.7   0.0    1.4  1  ABC_tran     ABC transporter
       0.13   11.4   0.0       0.37    9.9   0.0    1.4  2  G-alpha      G-protein alpha subunit


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  184.4   0.0   6.2e-58   1.1e-54       1     160 [.      15     181 ..      15     183 .. 0.98

  Alignments for each domain:
  == domain 1  score: 184.4 bits;  conditional E-value: 6.2e-58
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHH.HHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvk.kwveeik 98 
                 K+v++Gd+a GKtsll+ f+k++F++ ye+Ti +++y+++i vdg++++l++wDTAGqee+++lr+l+y+d+++i+++++++s +s+env  kw+ e++
  EPX74672.1  15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTI-FENYIHDIFVDGNSIELSLWDTAGQEEYDQLRSLSYSDTHVIMICFAVDSPDSLENVIaKWLPEVS 112
                 9*******************************.********************************************************988******* PP

                 HHSTTTSEEEEEEETTTGGG.......G-SS-HHHHHHHHHHHT.SEEEEEBTTTTCTHHHHHHHHHHHH CS
         Ras  99 rvaeenvpivLvGnKvDlee.......kravsteegeelakelg.lkfletSAktnenveeafeellrei 160
                 r ++ +v++vLv+ K+Dl+        +r + +eeg + ak+++ +++le+SAk n +v+eaf+e++r +
  EPX74672.1 113 RNCP-SVKLVLVALKCDLRGadddqanSRLIGYEEGLAAAKKINaVRYLECSAKLNRGVNEAFTEAARVA 181
                 ****.6*************999****9*****************9*********************9976 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.8   0.0   9.8e-26   1.8e-22       1     120 []      15     129 ..      15     129 .. 0.87

  Alignments for each domain:
  == domain 1  score: 79.8 bits;  conditional E-value: 9.8e-26
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE...GHHHHC.H CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd...srssen.l 95 
                 K+v++Gd+++GKtsll+ f+++ f + +++ti  ++++  +  ++g       ++++l++WDtaGqe++++l++l +++ +++++++     +s en +
  EPX74672.1  15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIF--VDG-------NSIELSLWDTAGQEEYDQLRSLSYSDTHVIMICFAvdsPDSLENvI 104
                 9*******************************999988654..444.......5799***************************998733322334415 PP

                 HHHHHHHHHHCSSS-EEEEEE-TTT CS
         Roc  96 keWlkelkkvagkspvilvgnkiDl 120
                  +Wl e+++++++ +++lv+ k+Dl
  EPX74672.1 105 AKWLPEVSRNCPSVKLVLVALKCDL 129
                 89*********************95 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.0   0.0   3.1e-13   5.5e-10      15     169 ..      14     175 ..       4     180 .. 0.78

  Alignments for each domain:
  == domain 1  score: 39.0 bits;  conditional E-value: 3.1e-13
                 EEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSSEE.EEEEEE..TTEEEEEEEE-SSGGGGGGGGGGCTTESEEE..EEEETT-CTTHHHHH.HHHHH CS
         Arf  15 lrilllGLDnaGKtTilkklkleelvt.tvPTigfn.veelei..knlkftvwDvGGqeklRplWknYfektdavi..fvvDsadreRleeak.eeLka 106
                  +i++lG  +aGKt +l+ ++++ + +   PTi  n ++++ +  + +++++wD  Gqe+  +l +  +++t++++  f vDs d+  le+   + L +
  EPX74672.1  14 RKIVILGDGAAGKTSLLNVFTKGYFPQvYEPTIFENyIHDIFVdgNSIELSLWDTAGQEEYDQLRSLSYSDTHVIMicFAVDSPDS--LENVIaKWLPE 110
                 49**********************988578**988746777664489*************99999999999987652377888776..33332023444 PP

                 HCTSGCCTTSEEEEEEE-TTSTTSS-HHHHHHHTTGGG....SSSSSSEEEEEEBTTTTBTHHHHHH CS
         Arf 107 lleeeelkevallvlaNKqDlpealseeelrellglee....lkgkrkleiqkcsavkgeglkegle 169
                 +  +++  +v+l+++a K Dl++a +++  ++l+g ee     k+ + +   +csa  ++g++e+++
  EPX74672.1 111 V--SRNCPSVKLVLVALKCDLRGADDDQANSRLIGYEEglaaAKKINAVRYLECSAKLNRGVNEAFT 175
                 3..3456699*****************99999999988843333445566779*********99986 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   9.3e-07    0.0017       1     103 [.      15     110 ..      15     126 .. 0.60

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 9.3e-07
                 EEEEEESTTSSHHHHHHHHHTS.TEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHH.HHHHHHHHHHCTSEEEEEEETTTTCSHHHHHHH CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltge.kaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseek.glgkaflaleeadlillvvdaseeklkpldeel 97 
                 +++i+G   +GK++L+n  t+    +v +       i  + v+ +  e+ l+Dt+G  e    e  +l+    +   + +i++ vd s    + l++ +
  EPX74672.1  15 KIVILGDGAAGKTSLLNVFTKGyFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAG-QE----EYdQLRSLSYSDTHVIMICFAVD-S---PDSLENVI 104
                 589*****************98444554333333333333355445889*******.54....33123322222333556777777.3...45566777 PP

                 HHHHHH CS
    MMR_HSR1  98 eellee 103
                 +++l e
  EPX74672.1 105 AKWLPE 110
                 877765 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   1.6e-06    0.0029       1      86 [.      15      96 ..      15     162 .. 0.67

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 1.6e-06
   Gtr1_RagA  1 kvLLmGksgsGKtsmrsiiFdnylardtlrlgatidveksevrflgnltlnlwDcgGqeafvee.ylssqkeeifrnvgvliyVfDv 86
                k++++G + +GKts+ ++  + y ++ + + ++  +  ++ +   + ++l+lwD  Gqe++ +  +ls++     ++v  + + +D+
  EPX74672.1 15 KIVILGDGAAGKTSLLNVFTKGYFPQ-VYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEYDQLrSLSYSD----THVIMICFAVDS 96
                7999*************999999986.444444455566666667889**********9986651222222....233333444444 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.1   0.0    0.0054       9.7     102     120 ..      16      34 ..       9      43 .. 0.87
   2 !    8.3   0.0    0.0011         2      14      64 ..      83     143 ..      71     178 .. 0.70

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0054
                  EEEECSTTSSHHHHHHHHC CS
  RsgA_GTPase 102 svlvGqSGvGKStLinall 120
                  +v++G   +GK++L+n+++
   EPX74672.1  16 IVILGDGAAGKTSLLNVFT 34 
                  7999************986 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.0011
                  ES--EEEEEEESTTTT--HHHHHHHHHHHHHT..T-EEEEEEE-GGG--HHH........H CS
  RsgA_GTPase  14 aNvdqllivvslkepelslnlldrfLvlaeek..giepvivlnKiDlleeee........e 64 
                  +    ++i++++++p+  +n + + L ++ ++   +++v+v  K+Dl   ++         
   EPX74672.1  83 SDTHVIMICFAVDSPDSLENVIAKWLPEVSRNcpSVKLVLVALKCDLRGADDdqansrliG 143
                  555678999*****************98887633789999999***988777322332222 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   7.3e-06     0.013       4      86 ..      14      97 ..      12     120 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 7.3e-06
                -EEEEE-STTSSHHHHHHHHHHSS---B---S..S-EEETTG...GGTT-SEEEETT-GCCSHHHHHHHHHHGG.EEEEEEEEETT CS
       SRPRB  4 pavllvGlsdsGKTslftrLttdsvkktvtSq..essaalkvksekgskltliDfPGheklrqklleklkakss.lkglvfvvDSt 86
                ++++++G   +GKTsl++  t++ + + +     e+ + + + + +  +l l D  G+e+  q l     ++++ +  + f vDS 
  EPX74672.1 14 RKIVILGDGAAGKTSLLNVFTKGYFPQVYEPTifENYIHDIFVDGNSIELSLWDTAGQEEYDQ-LRSL-SYSDThVIMICFAVDSP 97
                6799*******************88777754445888888888888899999******99754.4444.444444999******95 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   5.5e-05     0.098      25     116 ..      14      85 ..       3     188 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 5.5e-05
      AAA_16  25 elvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipysalaqalareellrqlldeaesaeleawrekleealaavpelagaea 116
                 + +++ G+ + GK+sl++ + +           g + q         +  ++ +e ++ ++  + +s el+ w+++ +e++ + ++l+ ++ 
  EPX74672.1  14 RKIVILGDGAAGKTSLLNVFTK-----------GYFPQV--------YEPTI-FENYIHDIFVDGNSIELSLWDTAGQEEYDQLRSLSYSDT 85 
                 5689*************99985...........666666........55556.558888888888899999999999999995555544443 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00015      0.28      13      38 ..      15      40 ..      12      62 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00015
                EEEEEESTTSSHHHHHHHHTTSS--S CS
                xxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 13 kvaivGenGaGKStLlkllagllkpt 38
                k++i+G+  aGK++Ll+++++ + p+
  EPX74672.1 15 KIVILGDGAAGKTSLLNVFTKGYFPQ 40
                789*****************988775 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0   0.00021      0.37      24      64 ..      12      52 ..       6      61 .. 0.73
   2 ?   -1.8   0.0      0.75   1.4e+03     199     232 ..      58      91 ..      49      98 .. 0.63

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00021
                E..EEEEEESTTSSHHHHHHHHHHHCS----HHHHHCCHHHHH CS
     G-alpha 24 v..kllllGqseSGKsTilkqlkllykkgfseeelatwraviq 64
                +  k+++lG +  GK+++l+ + + y +++ e    ++ ++i+
  EPX74672.1 12 IyrKIVILGDGAAGKTSLLNVFTKGYFPQVYEP--TIFENYIH 52
                3349*******************9998877766..44445554 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.75
                 T-TEEEEEEEE-SSHHHHHGTCCCTTTECEEEEE CS
     G-alpha 199 dsklefrivdvgGqrserkkWvpffddvdaiiFl 232
                 ++++e+ ++d++Gq + ++     ++d+ +i+ +
  EPX74672.1  58 GNSIELSLWDTAGQEEYDQLRSLSYSDTHVIMIC 91 
                 5588899999999986544333345555555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       456  (0.0254337); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.48u 0.29s 00:00:00.77 Elapsed: 00:00:00.47
# Mc/sec: 1313.34
//
Query:       EPX74673.1  [L=129]
Description: DNA-binding TFAR19-like protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.6e-34  116.3  15.3    8.7e-34  116.1  15.3    1.0  1  dsDNA_bind      Double-stranded DNA-binding domain
  ------ inclusion threshold ------
       0.45   11.0   0.3       0.45   11.0   0.3    2.4  2  EF-1_beta_acid  Eukaryotic elongation factor 1 beta central a
       0.92    9.4   5.4        8.6    6.4   0.1    2.9  3  WH2             WH2 motif
        3.1    7.1   9.8        0.4   10.1   3.9    1.9  2  SDA1            SDA1


Domain annotation for each model (and alignments):
>> dsDNA_bind  Double-stranded DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.1  15.3   1.9e-37   8.7e-34       1     111 []       8     119 ..       8     119 .. 0.91

  Alignments for each domain:
  == domain 1  score: 116.1 bits;  conditional E-value: 1.9e-37
                 XXXXXXXXXXXXXXXXXXXX...XXXX--SS..S--SSHHHHTTS--HHHHHHHHHHTTT-HHHHHHHHHHHHHHHH--SS-----HHHHHHHHHHHS- CS
  dsDNA_bind   1 irkarlaelqaqagsssgsggaseqqeqqqeaseeeakqaiLsqiLepeAreRLsrirlvkperaeavenrLiqlaqsGqlrskvteeqLkeLLeqvae 99 
                 ir+arla+l++q+++s+ ++  +  +e qq+++++e +q++LsqiLe++Ar+RL ri+lvkp+ra+ave+ Li++a+sGq+ +k++e++L+eLLeq++ 
  EPX74673.1   8 IRQARLAQLKGQHQASQPQN--APASEGQQKEAQDELRQNMLSQILEHSARDRLRRIALVKPDRAQAVEELLIRMARSGQVLQKISESELIELLEQISG 104
                 9************9998854..344445555579****************************************************************9 PP

                 ...--XXXXX..XXX CS
  dsDNA_bind 100 ...kkketkivisrr 111
                    k+ketkiv+srr
  EPX74673.1 105 qlsKQKETKIVYSRR 119
                 9988888*****997 PP

>> EF-1_beta_acid  Eukaryotic elongation factor 1 beta central acidic region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.3    0.0001      0.45      10      24 ..       2      16 ..       1      18 [. 0.92
   2 ?   -4.8   4.3         4   1.8e+04       5      10 ..     122     126 ..     122     128 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.0001
  EF-1_beta_acid 10 DeEaerlreeRLaaY 24
                    DeE  ++r+ RLa+ 
      EPX74673.1  2 DEELQAIRQARLAQL 16
                    9************96 PP

  == domain 2  score: -4.8 bits;  conditional E-value: 4
  EF-1_beta_acid   5 DDEEED 10 
                     DDE+ D
      EPX74673.1 122 DDED-D 126
                     7888.5 PP

>> WH2  WH2 motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.8    0.0097        43       9      21 ..       5      17 ..       5      17 .. 0.95
   2 ?    6.4   0.1    0.0019       8.6       5      23 ..      43      62 ..      40      63 .. 0.87
   3 ?   -0.9   0.0      0.36   1.6e+03       8      13 ..      98     103 ..      97     104 .. 0.83

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.0097
                HHHHHHH..HTTB CS
         WH2  9 LadIraGskaqLK 21
                L++Ir++  aqLK
  EPX74673.1  5 LQAIRQARLAQLK 17
                89**********9 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0019
                CHHHHHHHHHH...HTTBSS CS
         WH2  5 RgALLadIraGs.kaqLKKv 23
                R ++L++I  +s +++L+ +
  EPX74673.1 43 RQNMLSQILEHSaRDRLRRI 62
                7799*************975 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.36
                 HHHHHH CS
         WH2   8 LLadIr 13 
                 LL++I 
  EPX74673.1  98 LLEQIS 103
                 9****7 PP

>> SDA1  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   3.9   8.9e-05       0.4     213     286 ..       2      71 ..       1      85 [. 0.82
   2 ?    1.0   0.4     0.052   2.3e+02      72     104 ..      95     127 ..      81     129 .] 0.62

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 8.9e-05
        SDA1 213 paDFaklkelraeaavkkqlesakrkkkkkkdeeeeeaeksedlvtasdieglakkrkatkeerlasvkegred 286
                 ++++++++++r    + +  +++++++ +++ ++e ++++++d ++++ + ++ ++   ++  r+a vk  r +
  EPX74673.1   2 DEELQAIRQAR----LAQLKGQHQASQPQNAPASEGQQKEAQDELRQNMLSQILEHSARDRLRRIALVKPDRAQ 71 
                 899********....66666666666666667777788889999999999999988888*********999876 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.052
        SDA1  72 GleLlekwkeeekkekre.....eeeedsddeddeedw 104
                  +eLle+++ + +k+k+      +        dde+dw
  EPX74673.1  95 LIELLEQISGQLSKQKETkivysR-----RAVDDEDDW 127
                 478999988888888777555431.....333344444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1776  (0.0990574); expected 358.6 (0.02)
Passed bias filter:                      756  (0.0421663); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.32s 00:00:00.76 Elapsed: 00:00:00.46
# Mc/sec: 839.55
//
Query:       EPX74674.1  [L=540]
Description: guanyl-nucleotide exchange factor Sec2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-26   91.6   8.4    2.2e-26   91.6   8.4    2.5  2  Sec2p       GDP/GTP exchange factor Sec2p
  ------ inclusion threshold ------
       0.14   12.5   3.2       0.48   10.8   3.2    1.9  1  DUF4854     Domain of unknown function (DUF4854)
       0.24   11.1  11.3       0.26   11.0   9.6    1.9  1  DUF745      Protein of unknown function (DUF745)
        1.8    6.4  10.9          3    5.7  10.9    1.4  1  V_ATPase_I  V-type ATPase 116kDa subunit family
        7.6    5.8  13.8         13    5.1  13.8    1.4  1  DUF4407     Domain of unknown function (DUF4407)


Domain annotation for each model (and alignments):
>> Sec2p  GDP/GTP exchange factor Sec2p
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.6   5.3         5   1.8e+04      50      67 ..      63      80 ..      16      93 .. 0.56
   2 !   91.6   8.4   6.1e-30   2.2e-26       2      89 ..      99     186 ..      98     189 .. 0.95

  Alignments for each domain:
  == domain 1  score: -4.6 bits;  conditional E-value: 5
                HHHHHHHHHHTTHCHCCC CS
       Sec2p 50 kkneklkeqLkeketlle 67
                +kne l+e+++  e+ + 
  EPX74674.1 63 HKNEVLEERIRKLEENIL 80
                355555555554443332 PP

  == domain 2  score: 91.6 bits;  conditional E-value: 6.1e-30
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHCHCCCHCTSSSSHHHHCTTTXXXXXXX CS
       Sec2p   2 lkeekkkreeaekekkklekEledLtasLFeeANkmVaaarkekealekkneklkeqLkeketlleslqeqLkeLkevlekmeeesee 89 
                 l+ +++k +++e e++++++E+e+Lt+sLFeeAN+mVa+arke+  ++++ ++l++qL+++etll + q+qL eLk+v+++m++  e+
  EPX74674.1  99 LRRTEAKYQTVEIERDRVQSEIEELTSSLFEEANRMVADARKETFVYQRRASQLQKQLADTETLLTNAQSQLIELKSVMQNMSDSYEQ 186
                 567788999*************************************************************************998665 PP

>> DUF4854  Domain of unknown function (DUF4854)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   3.2   0.00013      0.48       6      81 ..     112     184 ..     106     191 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00013
     DUF4854   6 qseevqsqieaakssledsGislevtaegntLvyeytlskslddaaldalkealaesldsqastfeslakqlkkev 81 
                 + + vqs+ie+ +ssl +    + + a+ +t+vy+   s+    +++ a +e+l ++ +sq   ++s+++++ ++ 
  EPX74674.1 112 ERDRVQSEIEELTSSLFEEANRMVADARKETFVYQRRASQL---QKQLADTETLLTNAQSQLIELKSVMQNMSDSY 184
                 6789*********************************9999...88889999999999999999999999988765 PP

>> DUF745  Protein of unknown function (DUF745)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   9.6   7.2e-05      0.26      66     165 ..      87     187 ..      77     197 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 7.2e-05
      DUF745  66 qleqelreaeavvqeekkslqsseanakaaakaakq.aqqqlealkallkaakenlenaeqvaagaqqelaektqlleaAkkRveeLkkqlkearkdle 163
                 ql  e ++  + +++ ++++q+ e   + +++  ++   + +e  +++++ a+++   +++ a++ q++la+ ++ll++A++++ eLk+ +++  + +e
  EPX74674.1  87 QLAIETEDVGEKLRRTEAKYQTVEIERDRVQSEIEElTSSLFEEANRMVADARKETFVYQRRASQLQKQLADTETLLTNAQSQLIELKSVMQNMSDSYE 185
                 4444444445555555555555555444444433330334455666778888888899999************************************** PP

      DUF745 164 kt 165
                 +t
  EPX74674.1 186 QT 187
                 99 PP

>> V_ATPase_I  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7  10.9   0.00083         3      17     139 ..      50     177 ..      11     245 .. 0.66

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.00083
  V_ATPase_I  17 dvnafqrkfvkevrrcdemerklrfleeeieklekavikeeea..eesleapeekeldeleeelekleeelkelnenl.eklkkelnelvelkavleka 112
                 +++a++ ++++e+++ + +e+++r lee+i  +ek+++ + e+  + ++ +++e++ +++e e +++++e++el+++l e+ ++ + ++ +++ v+++ 
  EPX74674.1  50 KQAALDERYADEIHKNEVLEERIRKLEENILTQEKTKQLAIETedVGEKLRRTEAKYQTVEIERDRVQSEIEELTSSLfEEANRMVADARKETFVYQRR 148
                 56788999*********************9886666655555433444444555566666666677777777766654255666666666666677666 PP

  V_ATPase_I 113 kefleee.eeeeeeeeseeeeee..keeee 139
                 ++ l+++ + ++e+  ++++++    ++ +
  EPX74674.1 149 ASQLQKQlA-DTETLLTNAQSQLieLKSVM 177
                 666665532.22222222222222211111 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1  13.8    0.0035        13     107     235 ..      14     156 ..      12     203 .. 0.79

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0035
     DUF4407 107 eIdaelaeeqqeeakelkeqlaaa................ltaelaeleaqiaalqaeidaaearldalraeaqkeldgtk.gtgttgvaGkgpaakek 188
                 e+++ +++++++e ke ++ + ++                l++++a++  +++ l++ i+++e+ + +++++ q  ++ +  g++    ++ ++ +++ 
  EPX74674.1  14 EVERNIEKNNEKELKEDSRAMSQEeilshkllvaiekqaaLDERYADEIHKNEVLEERIRKLEENILTQEKTKQLAIETEDvGEK---LRRTEAKYQTV 109
                 7888888888888888888888889999999998889999999999999999999999999999998888888877775433444...89999****** PP

     DUF4407 189 kaqldaaqaelaelkakldatarlaalraelaeleaerakeraasqa 235
                 + + d+ q e++el+++l ++a++  ++a++++   +r++++ ++q 
  EPX74674.1 110 EIERDRVQSEIEELTSSLFEEANRMVADARKETFVYQRRASQLQKQL 156
                 *****************997777777777777766655555544442 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (540 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2208  (0.123152); expected 358.6 (0.02)
Passed bias filter:                      596  (0.0332422); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.67u 0.32s 00:00:00.99 Elapsed: 00:00:00.48
# Mc/sec: 3409.96
//
Query:       EPX74675.1  [L=53]
Description: F0-ATPase subunit J [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-15   54.4   0.0    7.5e-15   54.2   0.0    1.1  1  ATP-synt_J  ATP synthase j chain


Domain annotation for each model (and alignments):
>> ATP-synt_J  ATP synthase j chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.2   0.0   4.2e-19   7.5e-15       1      40 [.       8      47 ..       8      49 .. 0.97

  Alignments for each domain:
  == domain 1  score: 54.2 bits;  conditional E-value: 4.2e-19
                -----SSSSSHHHHHHHHHHHHHHHHHHHHSTTSSSSSS- CS
  ATP-synt_J  1 kfptpvlkpmwPFfaaglivlygvnkaqnammnsdEfknD 40
                ++ptp+lkpm PFf +g+i++yg +k+ na+   +E knD
  EPX74675.1  8 AYPTPILKPMYPFFLGGGIIFYGTYKLRNALLGAEEKKND 47
                5**************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (53 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       130  (0.00725082); expected 358.6 (0.02)
Passed bias filter:                      121  (0.00674884); expected 358.6 (0.02)
Passed Vit filter:                         7  (0.000390429); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.23s 00:00:00.57 Elapsed: 00:00:00.40
# Mc/sec: 397.90
//
Query:       EPX74676.1  [L=434]
Description: CK1/CK1/CK1-D protein kinase Hhp2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      5e-27   94.9   0.0    6.4e-27   94.6   0.0    1.1  1  Pkinase         Protein kinase domain
    2.4e-16   59.8   0.0      3e-16   59.5   0.0    1.1  1  Pkinase_Tyr     Protein tyrosine kinase
    2.1e-09   36.7   0.1    2.8e-09   36.3   0.1    1.1  1  Pkinase_fungal  Fungal protein kinase
    2.4e-05   24.4   0.0    0.00015   21.7   0.0    2.2  3  APH             Phosphotransferase enzyme family
  ------ inclusion threshold ------
       0.06   12.9   0.1       0.11   12.0   0.1    1.4  1  Choline_kinase  Choline/ethanolamine kinase
       0.13   11.2   0.1       0.27   10.1   0.1    1.4  1  Haspin_kinase   Haspin like kinase domain
       0.14   12.3   0.0       0.44   10.7   0.0    1.8  1  ABC1            ABC1 family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.6   0.0   2.5e-30   6.4e-27       1     212 [.      30     246 ..      30     278 .. 0.81

  Alignments for each domain:
  == domain 1  score: 94.6 bits;  conditional E-value: 2.5e-30
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS...CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHH.HHSS- CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklk...hpnivrlyevfeekdelylvleyveggeladlle.rkgsl 95 
                 y+  +k+G+GsfG++y +++  +g++vAvK    +++ ++ e     E ++ + lk      i+r ++++++     +v++++   +l+dl     +++
  EPX74676.1  30 YRIGRKIGSGSFGQIYLGLNVVNGEQVAVKLEPLKSRHHQLE----YEFRVYNILKgniGIPIIRWFGIVNNY--NAMVMDLLG-PSLEDLFCyCGRKF 121
                 67899*************************988887777554....677776666633366788888888754..457778776.4477776633456* PP

                 -HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEE.TTTEEEE-SGTTSEESSSSCS........BCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHH CS
     Pkinase  96 seeeakkiakqilegleylHskgiiHrDlKpeNiLid.ekgelKitDFGlakelesssk........ltsfvgtseYlAPEvlkeneyskkvDvWslGv 185
                 s +++  +a q+++ +ey+H+k+++HrD+Kp+N+L++ +++++ ++DFGlak+++  ++         ++ +gt +Y +     + e s+  D+ slG 
  EPX74676.1 122 SLKTVVLLADQLISRIEYVHQKSFLHRDIKPDNFLLKkHSNVITMIDFGLAKKYRDFKTyvhipyrdNKNLTGTARYASINTHIGIEQSRRDDLESLGY 220
                 *************************************56666**************9999******99***********88887889999********* PP

                 HHHHHHHSS-STTTSSHHHHHHHHHHT CS
     Pkinase 186 ilyelltgkppfsgekgkekvekeldq 212
                 +l+ +  g+ p++g + ++ +e+++++
  EPX74676.1 221 VLLYFCRGSLPWQGLQADT-KEQKYQK 246
                 *************655544.2233322 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.5   0.0   1.2e-19     3e-16       3     218 ..      32     244 ..      30     290 .. 0.83

  Alignments for each domain:
  == domain 1  score: 59.5 bits;  conditional E-value: 1.2e-19
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTS CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekekl 100
                  +g+k+G+G+fG+++ g        + ++VavK    ++++++ e  ++ ++i+k      i++  g++ +     +v++++   +L++       +k+
   EPX74676.1  32 IGRKIGSGSFGQIYLGLNV----VNGEQVAVKLEPLKSRHHQLEYEFRVYNILKGNIGIPIIRWFGIVNN--YNAMVMDLLG-PSLEDLFCYC-GRKF 121
                  789*************999....88999******999999999999999*****999999********95..5679***985.5899988888.999* PP

                  BHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE.TTEEEE-STTTHEETTTSSEE.....EETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHH CS
  Pkinase_Tyr 101 tlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse.nkvvkisDfGLardiekddey.....vkkeeaklpvkWmapEslkekkftsksDvWsfG 192
                  +lk+++ +a q+ + +ey+++k+++Hrd+   N Ll++ ++v+ + DfGLa++  + ++y     +++++ +   ++ ++ +    + + + D  s G
   EPX74676.1 122 SLKTVVLLADQLISRIEYVHQKSFLHRDIKPDNFLLKKhSNVITMIDFGLAKKYRDFKTYvhipyRDNKNLTGTARYASINTHIGIEQSRRDDLESLG 219
                  ************************************9836699**********988887766665677788889999999999999999999999999 PP

                  HHHHHHHTTSSGTTTTSHHHHHHHHH CS
  Pkinase_Tyr 193 vllwEiftlgespypglkneevlekl 218
                   +l   +  g+ p++gl++ +  +k+
   EPX74676.1 220 YVLLYFC-RGSLPWQGLQADTKEQKY 244
                  8887555.599999998554433333 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.3   0.1   1.1e-12   2.8e-09     323     408 .]     140     226 ..     123     226 .. 0.86

  Alignments for each domain:
  == domain 1  score: 36.3 bits;  conditional E-value: 1.1e-12
  Pkinase_fungal 323 flkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddsses.....garertGTleFmaievlkgeeHsyrhDLESffyvllwic 408
                     ++++ +LHrDi  +N l+     ++++   +iD+ lak++ d ++       ++++ tGT+ + +i+   g+e s r+DLES+ yvll+ c
      EPX74676.1 140 VHQKSFLHRDIKPDNFLLK----KHSNVITMIDFGLAKKYRDFKTYVhipyrDNKNLTGTARYASINTHIGIEQSRRDDLESLGYVLLYFC 226
                     448999************9....5688999***********865554555555599*********************************98 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.69   1.8e+03      22      60 ..      55      92 ..      48     106 .. 0.74
   2 !   21.7   0.0     6e-08   0.00015     165     197 ..     142     173 ..     125     175 .. 0.84
   3 ?   -2.5   0.0       1.5     4e+03     177     194 ..     294     310 ..     293     337 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.69
                -EEEEEE-TTS-HHHHHHHHHHHHHHHHTT-B--B-CTT CS
         APH 22 ryvlrrnpparaaeeirrevallrlLakagvpvPevlag 60
                ++++++ p +  + +++ e++++  L ++ + +P + ++
  EPX74676.1 55 QVAVKLEPLKSRHHQLEYEFRVYNILKGN-IGIPIIRWF 92
                78899999999999999999999999966.434445554 PP

  == domain 2  score: 21.7 bits;  conditional E-value: 6e-08
                 -EEEE-SS-SGGGEEEC..TTEEEEE---TT-E CS
         APH 165 ptvllHgDlhpgNllvdpddgrvtGviDfedag 197
                 ++++lH+D++p+N+l++++   v+++iDf++a+
  EPX74676.1 142 QKSFLHRDIKPDNFLLKKH-SNVITMIDFGLAK 173
                 689**************55.5556******996 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 1.5
                 GEEEC..TTEEEEE---T CS
         APH 177 NllvdpddgrvtGviDfe 194
                 Nll++  + +  +v+D+ 
  EPX74676.1 294 NLLIR-KGIQYDYVFDWM 310
                 89999.778889999995 PP

>> Choline_kinase  Choline/ethanolamine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   4.3e-05      0.11     144     171 ..     142     169 ..     112     176 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 4.3e-05
                     -EEEE-S--SGGGEEE.-CTTEEEE--G CS
  Choline_kinase 144 pvvfcHnDlqegNillnkeekklvlIDF 171
                     +  f H D+ + N+ll+k+ + +++IDF
      EPX74676.1 142 QKSFLHRDIKPDNFLLKKHSNVITMIDF 169
                     25799*********************** PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.1   0.00011      0.27     227     257 ..     144     175 ..     125     195 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00011
  Haspin_kinase 227 eFEHRdLhldniLvdknlnv.tlidlklsRle 257
                     F HRd++ dn L++k+ nv t+id+ l++  
     EPX74676.1 144 SFLHRDIKPDNFLLKKHSNViTMIDFGLAKKY 175
                    588*************987539****999865 PP

>> ABC1  ABC1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00017      0.44      19      42 ..      36      60 ..      32      77 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00017
        ABC1 19 iAaASiaqVhrAklk.sgeeVavKv 42
                i+++S++q++ +    +ge+VavK 
  EPX74676.1 36 IGSGSFGQIYLGLNVvNGEQVAVKL 60
                89**********8777********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (434 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       376  (0.0209716); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.52u 0.28s 00:00:00.80 Elapsed: 00:00:00.45
# Mc/sec: 2882.57
//
Query:       EPX74677.1  [L=115]
Description: SNARE Bet1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0019   18.0   0.0      0.002   17.9   0.0    1.1  1  Use1        Membrane fusion protein Use1
     0.0046   17.3   1.2     0.0061   16.9   1.2    1.1  1  Syntaxin_2  Syntaxin-like protein
  ------ inclusion threshold ------
      0.058   13.4   0.6       0.13   12.3   0.6    1.6  1  SNARE       SNARE domain
      0.075   13.0   0.2      0.096   12.6   0.2    1.3  1  Sec20       Sec20


Domain annotation for each model (and alignments):
>> Use1  Membrane fusion protein Use1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   4.6e-07     0.002     166     238 ..      37     111 ..       5     113 .. 0.85

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 4.6e-07
        Use1 166 eemlsLarnLKenslaasqiikkDtetlsksekaadqnlaslkkeserleeh.skskvkcllwlllf.vvlvvFi 238
                  ++ + +++LK  ++ +++ i +  + ++ + +   +  + lk    rl++  ++s ++ ++wl++f +v ++F+
  EPX74677.1  37 ANLTGKVQSLKSLTMNIGTEITSSSKLMDTMNESYYTTQNTLKGTMGRLKNVsKSSGISIWTWLVFFcIVALIFV 111
                 556666799******************************************65999********98625666776 PP

>> Syntaxin_2  Syntaxin-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   1.2   1.4e-06    0.0061       3      59 ..      34      91 ..      33      95 .. 0.94

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 1.4e-06
  Syntaxin_2  3 snlqkinsnvstleklvkqLgtk.kdteelreklhelieeinelikktnellkklsql 59
                + + +++++v++l++l+  +gt  + + +l + ++e+   +++++k t  +lk++s+ 
  EPX74677.1 34 NRIANLTGKVQSLKSLTMNIGTEiTSSSKLMDTMNESYYTTQNTLKGTMGRLKNVSKS 91
                6799*******************779*****************************985 PP

>> SNARE  SNARE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.6   2.8e-05      0.13       2      52 ..      63     113 ..      62     113 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 2.8e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTXXXXXXXXXXXXXXXXXXX CS
       SNARE   2 mvDrIdtnVenaqsnveraqkeLkkavkyqksnRklkciillilviillvv 52 
                 ++D++  + +++q+ +++ +++Lk ++k++  + +    +++i+ +i+++v
  EPX74677.1  63 LMDTMNESYYTTQNTLKGTMGRLKNVSKSSGISIWTWLVFFCIVALIFVLV 113
                 689999999********************9988886666666666666654 PP

>> Sec20  Sec20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.2   2.1e-05     0.096      29      88 ..      55     112 ..      30     115 .] 0.73

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 2.1e-05
       Sec20  29 eeldastkslekleeeykqvedvlsrskklvkklerrdktdkllvflalglf.lacvvyvv 88 
                  e+ +s+k + +++e y  ++++l+ +   +k + +++    + +   l +f +++ ++v+
  EPX74677.1  55 TEITSSSKLMDTMNESYYTTQNTLKGTMGRLKNVSKSSG---ISIWTWLVFFcIVALIFVL 112
                 58999********************99887777777665...4455555554233334444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1073  (0.0598472); expected 358.6 (0.02)
Passed bias filter:                      634  (0.0353617); expected 358.6 (0.02)
Passed Vit filter:                        70  (0.00390429); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 853.88
//
Query:       EPX74678.1  [L=423]
Description: mannosyltransferase complex subunit Alg1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.6e-11   41.7   0.0    2.6e-08   33.6   0.0    2.5  3  Glycos_transf_1  Glycosyl transferases group 1
    1.8e-09   38.2   0.0    4.9e-09   36.7   0.0    1.7  2  Glyco_trans_1_4  Glycosyl transferases group 1
    2.7e-05   24.7   0.0    4.2e-05   24.0   0.0    1.3  1  Glyco_trans_4_4  Glycosyl transferase 4-like domain
      5e-05   23.4   0.4    9.6e-05   22.4   0.4    1.4  1  Glyco_transf_4   Glycosyltransferase Family 4
    0.00015   22.1   0.0    0.00036   20.9   0.0    1.6  1  Glyco_trans_1_2  Glycosyl transferases group 1


Domain annotation for each model (and alignments):
>> Glycos_transf_1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       1.5   5.2e+03      12      26 ..      23      37 ..      17      58 .. 0.77
   2 !    5.3   0.0    0.0035        12      66     109 ..     159     206 ..     153     209 .. 0.92
   3 !   33.6   0.0   7.2e-12   2.6e-08      25     166 ..     252     395 ..     239     400 .. 0.80

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 1.5
                     TTT-EEEEEESS-TT CS
  Glycos_transf_1 12 nekkkiilsvgrlek 26
                     ++k+ iil++gr++ 
       EPX74678.1 23 KSKRIIILVLGRIDQ 37
                     478889999999875 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.0035
                      HHHHCTTCGGGEEECCH.SSSHHHHHHCESEEEEEESS...BSS-HHH CS
  Glycos_transf_1  66 aeelelsdnviflgevs.redleellknadifvlpsis...EgfGivl 109
                      + +l+l++n+ f++ +  +e++ + + +++i+v  s+    Eg+Gi +
       EPX74678.1 159 ILALKLGKNHLFVKILRiYERILAKYAYCHITVSHSMQrvlEGWGIRP 206
                      77899999****999999*******************9*******965 PP

  == domain 3  score: 33.6 bits;  conditional E-value: 7.2e-12
                      TTTTTHHHHHHHHHCCCCC.HCSCEEEEEES.STTHHHHHHHHHHHCTTCGGGEEECCHSSSHHHHHHCESEEEEEESS...BSS-HHHHHHHH CS
  Glycos_transf_1  25 ekeKgvdllikafallkkq.lnpnvklviaGngeeekelkklaeelelsdnviflgevsredleellknadifvlpsis...EgfGivllEAma 114
                      ++  ++  l +a++   ++    ++ +++ G+g+ ++ + k++e+  l++  + l   s ed +  +  ad  v   +s     +++ ++  + 
       EPX74678.1 252 TPDENIYALWDALKMYSETqNAVPLLVLVTGKGPGKADFVKHIEKNPLENIRFCLPWFSSEDYPRAIACADFGVSLHQSssgYDLPMKVVDLFG 345
                      5666666777777777666234556666789*****************777666777778999999999886655555555999********** PP

                      TT--EEEETTTTHCHHCHTTTSEEEE-TT-HHHHHHHHHHHHHSHHHHHHHH CS
  Glycos_transf_1 115 aglpviasnaggpaevvkdgetGllvkpnnaealaeairklledeelrerlg 166
                      +g+pv+a n + ++e+v d+e+G++v+++   +l ++i+ l +de + +  +
       EPX74678.1 346 CGVPVVAWNFPAISELVHDNENGFIVDNY--VELYKKIEMLCSDERMLQSVR 395
                      *****************************..999999999999997776655 PP

>> Glyco_trans_1_4  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0         2   7.2e+03       4      40 ..      29      61 ..      26      80 .. 0.49
   2 !   36.7   0.0   1.4e-12   4.9e-09      13     134 .]     253     387 ..     242     387 .. 0.77

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 2
                     EEEES---GG.GTHHHHHHHHHHHH.HHEEEEEES-- CS
  Glyco_trans_1_4  4 ilfvGrleenvkgvdllleavpllrkkdvrlvivGdg 40
                     il +Gr+++     ++  +a+   + + +++ +vG +
       EPX74678.1 29 ILVLGRIDQ---SPRMQYHALSFAK-EGWEVNLVGYQ 61
                     555555521...2222223333223.22666666644 PP

  == domain 2  score: 36.7 bits;  conditional E-value: 1.4e-12
                      G.GTHHHHHHHHHHHH.H.H...EEEEEES---...HHHHHHHT..T-T.TEEEE---...THHHHHHHH-SEEEE--...-..--SHHHHHHH CS
  Glyco_trans_1_4  13 nvkgvdllleavpllrkk.d...vrlvivGdgp.rpeeleelaa..gleerveftGfv...edlaellaaadvfvaPs...e..gfglkllEam 91 
                      + +++  l +a++   +  +   + +++ G+gp ++ ++ + ++   l e+++f+      ed ++++a ad  v          +++k+++ +
       EPX74678.1 253 PDENIYALWDALKMYSETqNavpLLVLVTGKGPgKA-DFVKHIEknPL-ENIRFCLPWfssEDYPRAIACADFGVSLHqssSgyDLPMKVVDLF 344
                      44667777777766664433445778999***9876.45445644566.79999876669999***********997654433369******** PP

                      HTT-EEEE-TGGGTTT--..TTSSEE--TT-HHHHHHHHHHHHH- CS
  Glyco_trans_1_4  92 aaglpvVatdvggiaevv..gengllvppgdpealaeailrLled 134
                       +g+pvVa + ++i+e+v  +eng++v+  +  +l ++i+ L +d
       EPX74678.1 345 GCGVPVVAWNFPAISELVhdNENGFIVD--NYVELYKKIEMLCSD 387
                      ******************999******9..899999999999876 PP

>> Glyco_trans_4_4  Glycosyl transferase 4-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.0   1.2e-08   4.2e-05      11     152 ..      45     207 ..      37     211 .. 0.75

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 1.2e-08
  Glyco_trans_4_4  11 araLaarGheVtvlt..papapgapeleedgvrvhrlpvprrp.spladlaal........ralrrll....rqrrerpdvvhahs.ptaglaa 88 
                      a ++a++G+eV ++   +++a g + + +  + +h +p+ +++ s + +l++l        ++l +ll    + ++  + +v+    +++ +++
       EPX74678.1  45 ALSFAKEGWEVNLVGyqDKKASGLF-RSHQNIKIHAIPTLPKQfSFRSRLSFLliapakilHQLLSLLfiifKIKQSSYFLVQNPPsIPTFFLG 137
                      66789*********96555555566.8899********99998655555555544444444888888888887788888888886535678888 PP

  Glyco_trans_4_4  89 rlarrrrgiplvvtlhg.....lllrrg.sgavrrlyralerrllrradavlvvseaeaeelralgvpad 152
                       ++ + rg+++v+++h+     l+l  g ++    ++r  er l++ a + ++vs+++ + l+ +g+++ 
       EPX74678.1 138 HVLFLLRGTRFVIDWHNfgytiLALKLGkNHLFVKILRIYERILAKYAYCHITVSHSMQRVLEGWGIRPC 207
                      777779**********744433334444566666777888***************************974 PP

>> Glyco_transf_4  Glycosyltransferase Family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.4   2.7e-08   9.6e-05      14     159 ..      47     209 ..      40     211 .. 0.65

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 2.7e-08
  Glyco_transf_4  14 aLarrGheVtvvtpgddgpleeev....elvvrvprvplpllkrllrslafl............rrlrrllkrekpDvvHahspaalgaallalr 92 
                      +a+ G+eV +v  +d+++++  +    + ++++p  p  ++ r ++s+  +            + +   +k+  + +v    +++ ++ ++ l 
      EPX74678.1  47 SFAKEGWEVNLVGYQDKKASGLFRshqnIKIHAIPTLPKQFSFRSRLSFLLIapakilhqllslLFIIFKIKQSSYFLVQNPPSIPTFFLGHVLF 141
                     57888999999966666665555555453333333333333332222222211111111110003334445555888885554445555555555 PP

  Glyco_transf_4  93 rrlgiplVltvHglye..krllkarlkplsrllralerrllrradrviavSeatadelrerygvppeki 159
                     + +g ++V+  H+  +    l  +++ ++ ++lr +er l++ a + i+vS+++++ l+  +g++p ++
      EPX74678.1 142 LLRGTRFVIDWHNFGYtiLALKLGKNHLFVKILRIYERILAKYAYCHITVSHSMQRVLEG-WGIRPCHV 209
                     56*************999888889999999******************************.***98444 PP

>> Glyco_trans_1_2  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0     1e-07   0.00036       3      73 ..     327     397 ..     324     413 .. 0.79

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 1e-07
  Glyco_trans_1_2   3 Lnpsrs.espnlrlfEaaacGafaltddaegleelftpgkevilfedleelaekiryllanpeerraiaeaa 73 
                      L+ s s +++ +++++  +cG+++++   +++ el+ +++ ++++++  el +ki+ l +++   ++  +++
       EPX74678.1 327 LHQSSSgYDLPMKVVDLFGCGVPVVAWNFPAISELVHDNENGFIVDNYVELYKKIEMLCSDERMLQS-VRQG 397
                      55555546699****************99***************************77655554444.4444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (423 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       543  (0.0302861); expected 358.6 (0.02)
Passed bias filter:                      457  (0.0254894); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.28s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 2798.34
//
Query:       EPX74679.1  [L=210]
Description: DNA-directed RNA polymerase I [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.3e-34  115.1   0.3      7e-33  112.3   0.3    2.1  2  RNA_pol_Rpb5_C  RNA polymerase Rpb5, C-terminal domain
    8.6e-24   83.9   0.0    1.4e-23   83.2   0.0    1.4  1  RNA_pol_Rpb5_N  RNA polymerase Rpb5, N-terminal domain
     0.0042   17.1   0.0     0.0071   16.4   0.0    1.5  1  Mrr_cat         Restriction endonuclease
  ------ inclusion threshold ------
       0.11   12.8   0.0        0.2   11.9   0.0    1.3  1  Sof1            Sof1-like domain
       0.12   12.4   0.0       0.16   12.0   0.0    1.2  1  ALG11_N         ALG11 mannosyltransferase N-terminus


Domain annotation for each model (and alignments):
>> RNA_pol_Rpb5_C  RNA polymerase Rpb5, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.16   5.6e+02      50      68 ..       4      22 ..       1      25 [. 0.82
   2 !  112.3   0.3   1.9e-36     7e-33       1      73 []     137     209 ..     137     209 .. 0.99

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.16
                    -TTSEEEEEEEETTTEEEE CS
  RNA_pol_Rpb5_C 50 kkGdvvkItrksetageav 68
                     + ++vk+ r  +ta + v
      EPX74679.1  4 DERNIVKVFRAWKTAHQLV 22
                    56789******99998876 PP

  == domain 2  score: 112.3 bits;  conditional E-value: 1.9e-36
                     ..-TSSSS--EEEEE-HHHHHHHHHHTT--TTCSS-EETTSHHHHCCT--TTSEEEEEEEETTTEEEEEEEEE CS
  RNA_pol_Rpb5_C   1 vnitkHelvPkhevlseeekkellkklkikeeqLPkisksDpvarylglkkGdvvkItrksetageavtYRlV 73 
                     vnit+HelvPkh +l++eekkell+++k++e+qLP+i+  Dpvarylglk+G+vvkI+rkset+g++ +YR++
      EPX74679.1 137 VNITHHELVPKHILLTPEEKKELLDRYKLRETQLPRIQLADPVARYLGLKRGQVVKIVRKSETSGRYNSYRIC 209
                     7**********************************************************************96 PP

>> RNA_pol_Rpb5_N  RNA polymerase Rpb5, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.2   0.0     4e-27   1.4e-23       1      88 [.       5      93 ..       5      94 .. 0.93

  Alignments for each domain:
  == domain 1  score: 83.2 bits;  conditional E-value: 4e-27
                    THHHHHHHHHHCCCCCCCCCCCEE--CCCCT--CHHHHCCSB-SSSSB-GCCT-EEEESS.SS.--EEEEEE-SSTTE-TCCCHHHCHH CS
  RNA_pol_Rpb5_N  1 ereikrlfrirrTvleMlkdRgYlvaeeelnisleeFkekygdepkevdrekltisaskkddp.seqilVfFpeekkvgvktikkyaer 88
                    er+i ++fr+++T++++++dRgY v+++el+ +l++Fk+  +   ++ dr+ l+++a+    + +++i+V+F++e++vg+k++++++++
      EPX74679.1  5 ERNIVKVFRAWKTAHQLVHDRGYGVSQAELDLTLDQFKAMHCGMGRNLDRSTLSFYAKPPAGSdKGTIYVEFSKEPSVGIKEMRSFVHT 93
                    57899***************************************9*************55544489********************986 PP

>> Mrr_cat  Restriction endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0     2e-06    0.0071      44      99 ..      64     120 ..      16     137 .. 0.82

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 2e-06
                 TEEEE..EEEEEEE--TS-B-HHHHHHHHHHCTTS..SEEEEEESS-B-HHHHHHHHT CS
     Mrr_cat  44 plgse..rilvqaKryknkvgvkeVqeligalkkrgadkgifvttsdftkaAreeaee 99 
                 p gs+  +i+v+  + + +vg ke ++++ +l ++++++gi++ ++++t++A + ++ 
  EPX74679.1  64 PAGSDkgTIYVEFSK-EPSVGIKEMRSFVHTLGDHNHKTGILIYANSMTPSAAKIIST 120
                 445554478888766.789********************************9887654 PP

>> Sof1  Sof1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   5.6e-05       0.2      26      67 ..     128     169 ..     127     180 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 5.6e-05
        Sof1  26 ekykhmpeikrIarhRhvPkaikkakkekremkeaekrKeen 67 
                 e +++   i  I  h  vPk+i  + +ek+e ++  k +e++
  EPX74679.1 128 ETFQESDLIVNITHHELVPKHILLTPEEKKELLDRYKLRETQ 169
                 78999999**************************99999875 PP

>> ALG11_N  ALG11 mannosyltransferase N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   4.6e-05      0.16      25      81 ..      91     147 ..      78     152 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 4.6e-05
     ALG11_N  25 vkalqkekkkvkivvYtgdlevskeeilekvkerfnieldkkrikfvaLkkrklvea 81 
                 v++l ++++k+ i++Y++ ++ s+++i+++v+ +f+ie  +++  +v++++++lv +
  EPX74679.1  91 VHTLGDHNHKTGILIYANSMTPSAAKIISTVTGQFSIETFQESDLIVNITHHELVPK 147
                 7788889999****************************7777778899999888865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       584  (0.0325729); expected 358.6 (0.02)
Passed bias filter:                      537  (0.0299515); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.46u 0.29s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 1424.99
//
Query:       EPX74680.1  [L=423]
Description: autophagy associated lipase Atg15 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      8e-08   32.3   0.0    2.4e-07   30.7   0.0    1.8  2  Lipase_3         Lipase (class 3)
     0.0014   18.4   0.0     0.0029   17.3   0.0    1.5  1  Abhydrolase_1    alpha/beta hydrolase fold
  ------ inclusion threshold ------
       0.02   15.1   0.1        6.5    7.1   0.0    2.6  2  Coat_F           Coat F domain
      0.023   15.2   1.3      0.037   14.5   0.2    2.0  2  Defensin_beta_2  Beta defensin
      0.097   13.3   0.0       0.15   12.6   0.0    1.3  1  Abhydrolase_6    Alpha/beta hydrolase family


Domain annotation for each model (and alignments):
>> Lipase_3  Lipase (class 3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       1.1   3.8e+03      16      49 ..      22      58 ..      16      99 .. 0.60
   2 !   30.7   0.0   6.8e-11   2.4e-07      46      85 ..     255     294 ..     201     301 .. 0.66

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 1.1
                -----EEE-HHHH-G...TT-EEEHHHHHHHHS-HHH CS
    Lipase_3 16 dldfslteakellek...eggkvhsgfleayeeslre 49
                 +++s + ++ l +     ++k+ + f + ++++ ++
  EPX74680.1 22 SFRISNEWVQRLQPSdefVNVKLRHVFHHGLNTQYNQ 58
                5555555555544334445566666666655533333 PP

  == domain 2  score: 30.7 bits;  conditional E-value: 6.8e-11
                 -HHHHHHHHHHHHHHHTT-EEEEEEEETHHHHHHHHHHHH CS
    Lipase_3  46 slreqvlkelkrllekypeysivvtGHSLGgalAlLaald 85 
                   +++ l+   ++ + yp+++i++tGHSLGga+A+L++l 
  EPX74680.1 255 RYYSASLDIYYNVRDLYPDAQIWLTGHSLGGATASLMGLS 294
                 455555555566778899******************9875 PP

>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   8.2e-07    0.0029      52      93 ..     254     294 ..     197     300 .. 0.75

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 8.2e-07
                    CHHSHHHHHHHHHHHHHHCTTSSEEEEEETHHHHHHHHHHHH CS
  Abhydrolase_1  52 ddygtasvaddldrildalgddkltlvGhSmGGmialayaae 93 
                    ++y  a   d+++ ++d ++d +++l GhS+GG++a+ + + 
     EPX74680.1 254 TRYYSA-SLDIYYNVRDLYPDAQIWLTGHSLGGATASLMGLS 294
                    444443.34555588*********************998765 PP

>> Coat_F  Coat F domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0    0.0067        24      26      50 ..      38      62 ..      36      62 .. 0.93
   2 ?    7.1   0.0    0.0018       6.5      43      60 ..     362     379 ..     358     383 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0067
      Coat_F 26 EasnpelRqtlkqilneeiemqeel 50
                E+ n  lR ++ + ln + ++q++l
  EPX74680.1 38 EFVNVKLRHVFHHGLNTQYNQQYRL 62
                88999*****************986 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0018
      Coat_F  43 eiemqeelfnlmnqkGwY 60 
                 ++  qe ++++++ kGw 
  EPX74680.1 362 CHTGQECIYDVAKDKGWH 379
                 8999*************6 PP

>> Defensin_beta_2  Beta defensin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.2     1e-05     0.037       2      20 ..     234     252 ..     233     254 .. 0.92
   2 ?   -2.8   0.1       2.6   9.4e+03      19      29 ..     340     351 ..     337     351 .. 0.73

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 1e-05
  Defensin_beta_2   2 CwnlqGhCRkkCrknEkai 20 
                      C++ + +CR +C+++E+++
       EPX74680.1 234 CYKSTYTCRQTCLEDEVQS 252
                      999*************986 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 2.6
  Defensin_beta_2  19 aigyC.engklC 29 
                      + g C +++ lC
       EPX74680.1 340 FLGKCtGPTSLC 351
                      567788888888 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   4.2e-05      0.15      64     125 ..     273     331 ..     233     357 .. 0.65

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 4.2e-05
                    TTSEEEEEETCHHHHHHHHHHCC..EE...EEES-..----TTTS----TTHH..HHHHTT-CCCCH CS
  Abhydrolase_6  64 ggpvvlvGHSlGGalalaaaplalvvg...vlldppptalpagllaaalelll..allallrllawl 125
                    + +++l GHSlGGa a++     l +g   v  ++p       l+aa++ +l   + l+ + +l w+
     EPX74680.1 273 DAQIWLTGHSLGGATASL---MGLSFGiptVTFEAP-----GELMAARRLHLPmpPGLPDEESLIWH 331
                    4567**********9999...887777666777772.....22222222222200222222224555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (423 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       964  (0.0537676); expected 358.6 (0.02)
Passed bias filter:                      541  (0.0301746); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.46
# Mc/sec: 2762.50
//
Query:       EPX74681.1  [L=681]
Description: tRNA (cytosine-5-)-methyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.9e-39  133.4   0.1    1.2e-35  123.0   0.1    3.1  1  Methyltr_RsmB-F  16S rRNA methyltransferase RsmB/F
  ------ inclusion threshold ------
      0.029   14.5   0.0      0.073   13.2   0.0    1.6  1  FtsJ             FtsJ-like methyltransferase
       0.24   11.5   3.6       0.67   10.0   3.4    1.9  2  LicD             LicD family


Domain annotation for each model (and alignments):
>> Methyltr_RsmB-F  16S rRNA methyltransferase RsmB/F
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.0   0.1     2e-39   1.2e-35       3     200 .]     158     426 ..     156     426 .. 0.84

  Alignments for each domain:
  == domain 1  score: 123.0 bits;  conditional E-value: 2e-39
                      HH---TT-EEEESS-TTSHHHHHHHHHTTT.................TSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CTCCHHHHCC.. CS
  Methyltr_RsmB-F   3 lLapqeeetilDlcaaPGgKTthiaelmkn.................kgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.. 77 
                      +L++ ++  +lD+caaPG+KT+ + e + n                 +g ++A+da+ +R++ +++ ++rL+  n+ v++ Da+ +++v+    
       EPX74681.1 158 FLDLLPHHLVLDMCAAPGSKTAQLIEAIYNqahvkdavkdsanlsslQGLIIANDADPKRAQMLVHQINRLNSPNVLVVNHDASTMPNVIVPss 251
                      688889999************988765433011111111111222225679*************************************998778 PP

                      ..........EEEEEEEE--CCGGGTTT-TCHHHH--HHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEES--STTTTHHHHHHHHHH-.TTEEE CS
  Methyltr_RsmB-F  78 ........elfDriLlDaPCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkr.edvel 162
                               ++Dr+L D+PCsg g+ r++ ++    + +   +l++lq ++l   ++llk gG++vYsTCs+++ Ene+v+ +aLk++ e v l
       EPX74681.1 252 dkpdekeiLKYDRVLADVPCSGDGTFRKNISLWRDWSATSGLSLHSLQLRILIRGLQLLKVGGYMVYSTCSMNPIENEAVVSAALKATgESVSL 345
                      8999998889**********************66667778899******************************************987356788 PP

                      ESSBSTTSTTSSECEEC..............................................TSEEE-TTTTSS-SEEEEEEE CS
  Methyltr_RsmB-F 163 vetelsepkglklgeea..............................................gtlrllPhtenkdgffiaklk 200
                      v+++    k  +l++e+                                                 r++P+++n+ gffia lk
       EPX74681.1 346 VDISE---KLPELKRESglstwkvmddtlqeynspedphpenvtlastmwplsmdemknqhieRCARIYPQHQNTGGFFIAMLK 426
                      87733...3344444444567999************************************999999***************986 PP

>> FtsJ  FtsJ-like methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.2e-05     0.073      21     141 ..     163     326 ..     129     354 .. 0.65

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.2e-05
                 TT-EEEECT-TTSHHHHHHCCT.................T..-SEEEEEESSSS..........HHH..TTEEEECS-C.CCSSHHHHHCHCHHH...S CS
        FtsJ  21 pgktvvDlgaaPGgwsqvllqrl................ga.kgkvvavDlqpm..........apl..pgvttiqgdi.tdpetiekikealse...r 86 
                 p + v+D +aaPG+ +  l + +                   +g ++a D  p           + l  p+v +++ d  t+p++i   ++  +e    
  EPX74681.1 163 PHHLVLDMCAAPGSKTAQLIEAIynqahvkdavkdsanlSSlQGLIIANDADPKraqmlvhqinR-LnsPNVLVVNHDAsTMPNVIVPSSDKPDEkeiL 260
                 5678***************8888666666655555433311359999999988877666655421.246777777888756666665444333335556 PP

                 SEEEEEE--S-........SS-CHHHHHHHHHCCCCHHHHCC...HCCCCECCCEEEECCCHCCCH CS
        FtsJ  87 kvdlvvsDgap........dvsgvhdldeylqsqLllaalel...alkllkpggtfvlkifrgeet 141
                 k d v++D+          ++s+ +d  ++  ++L   +l++   +l+llk gg +v  ++    +
  EPX74681.1 261 KYDRVLADVPCsgdgtfrkNISLWRDWSATSGLSLHSLQLRIlirGLQLLKVGGYMVYSTCSMNPI 326
                 799999998634555555555555555555555555555555333889999999999887773333 PP

>> LicD  LicD family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   3.4   0.00011      0.67     133     216 ..      12     103 ..       2     112 .. 0.64
   2 ?   -2.2   0.0      0.64   3.8e+03      58     102 ..     121     169 ..     104     229 .. 0.64

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00011
        LicD 133 kdkkelkkkillkkksfklkklnkkkklkkleklekkk........eydlkkseyiavlksgklrnkeilpleelsplkkvkFegvevpipn 216
                 k+ +++k +i l++++f+++  +++ + +  e + +k+        ++ l ++ +i+ + +  +  k+ ++++++ +l++v++eg ++p+p+
  EPX74681.1  12 KRAYNDKSEIVLENEKFESYYRKQNIFGNSTESESEKEfqtlmeflKKPLPTTFRICGYLQHAFELKNHFEKNYIPQLQNVEYEGKKIPAPE 103
                 34444444444444444444444444444444444444444444444477777777777777778999**********************97 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.64
        LicD  58 reaekdknylenfaklldkntsiterkngngkndsglyiDIfpl....d 102
                   ++k +  ++ ++ l+ +n+  + ++++   + + l++D +p     d
  EPX74681.1 121 DVIRKSPPFKRLQRFLVSENEAGNINRQEAVSMLPPLFLDLLPHhlvlD 169
                 4456666666677777777777777777777778888888888733332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (681 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       671  (0.0374254); expected 358.6 (0.02)
Passed bias filter:                      541  (0.0301746); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.67u 0.29s 00:00:00.96 Elapsed: 00:00:00.45
# Mc/sec: 4505.17
//
Query:       EPX74682.1  [L=648]
Description: BRCT domain-containing protein Rad4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      8e-42  141.0   4.4    1.6e-20   72.8   0.0    4.6  4  PTCB-BRCT      twin BRCT domain
    1.7e-38  130.8   3.9    2.4e-13   50.3   0.1    4.6  4  BRCT           BRCA1 C Terminus (BRCT) domain
    1.3e-22   80.0   0.7    1.1e-08   35.4   0.0    4.6  4  BRCT_2         BRCT domain, a BRCA1 C-terminus domain
    4.6e-08   33.3   0.1    4.8e-05   23.6   0.0    3.1  3  LIG3_BRCT      DNA ligase 3 BRCT domain
     0.0002   21.2   0.2       0.17   11.8   0.0    3.1  3  RTT107_BRCT_5  Regulator of Ty1 transposition protein 107 BRC
  ------ inclusion threshold ------
      0.056   13.5   0.2      1e+02    3.1   0.0    3.6  3  BRCT_3         BRCA1 C Terminus (BRCT) domain


Domain annotation for each model (and alignments):
>> PTCB-BRCT  twin BRCT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.0   0.0   3.3e-17   9.9e-14       2      63 .]      11      74 ..      10      74 .. 0.97
   2 !   72.8   0.0   5.2e-24   1.6e-20       1      63 []     105     167 ..     105     167 .. 0.99
   3 !    6.3   0.0    0.0031       9.3       3      42 ..     305     344 ..     303     346 .. 0.91
   4 !    9.4   0.1   0.00033         1       3      63 .]     399     465 ..     397     465 .. 0.84

  Alignments for each domain:
  == domain 1  score: 51.0 bits;  conditional E-value: 3.3e-17
                EEEEECB-TTCHHHHHHHHHHTT-EEESSEETT-SEEEECSS-CHHHHHHHHCT..-EEE-CHH CS
   PTCB-BRCT  2 vicvtgysgddrkslqklieamGaeyskdltksvTHLicksgeGekyekAkkwg..ipvVsveW 63
                vic t+++ ++r+++ +   ++Ga+y+ dltk+vTHL++ ++   ky++A k +  +++Vs+eW
  EPX74682.1 11 VICCTNIELNKRTEISTKAIKLGATYKSDLTKDVTHLVAGDFDTPKYKFAAKSRpdMKIVSHEW 74
                79***********************************************9998889******** PP

  == domain 2  score: 72.8 bits;  conditional E-value: 5.2e-24
                 -EEEEECB-TTCHHHHHHHHHHTT-EEESSEETT-SEEEECSS-CHHHHHHHHCT-EEE-CHH CS
   PTCB-BRCT   1 lvicvtgysgddrkslqklieamGaeyskdltksvTHLicksgeGekyekAkkwgipvVsveW 63 
                 +++c+t++++ dr++l+++i ++G+ +  dlt++vTHLi+ ++ G+kye+A +w+i+vV+v+W
  EPX74682.1 105 CRVCLTNIEQPDRSQLETTICENGGIFCPDLTRDVTHLIAGNTDGRKYEYALRWKIKVVRVQW 167
                 689************************************************************ PP

  == domain 3  score: 6.3 bits;  conditional E-value: 0.0031
                 EEEECB-TTCHHHHHHHHHHTT-EEESSEETT-SEEEECS CS
   PTCB-BRCT   3 icvtgysgddrkslqklieamGaeyskdltksvTHLicks 42 
                 +++ ++++d+ ++l+k +++ G+ +s +   ++ ++i+++
  EPX74682.1 305 FYLYQFEEDKYNRLKKCLTREGGLISSTTEDTTSFVIVPH 344
                 57889999*****************************976 PP

  == domain 4  score: 9.4 bits;  conditional E-value: 0.00033
                 EEEECB-TTCHHHHHHHHHHTT-EEESSEETT-SEEEE......CSS-CHHHHHHHHCT-EEE-CHH CS
   PTCB-BRCT   3 icvtgysgddrkslqklieamGaeyskdltksvTHLic......ksgeGekyekAkkwgipvVsveW 63 
                 + ++g++g d+++++k +   Ga++   l  +   L +         +  k ++A+ w+++v  + W
  EPX74682.1 399 FHLSGFKGVDSSHIKKALILCGATVDNFLGVQRSVLLVntnepfSMKTRYKIQHATGWNVRVLGISW 465
                 5689*************************888888888565543344567899**********9999 PP

>> BRCT  BRCA1 C Terminus (BRCT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.2   0.0   1.3e-14   3.8e-11       3      75 ..       4      75 ..       2      79 .. 0.92
   2 !   50.3   0.1     8e-17   2.4e-13       8      79 .]     104     172 ..      98     172 .. 0.97
   3 !    9.7   0.0   0.00037       1.1       3      52 ..     297     345 ..     295     368 .. 0.74
   4 !   25.8   0.1   3.4e-09     1e-05       6      77 ..     394     468 ..     391     470 .. 0.94

  Alignments for each domain:
  == domain 1  score: 43.2 bits;  conditional E-value: 1.3e-14
                TTTTTTEEEEEEESTSSHHHHHHHHHHHHTTCEEESSCSTTSSEEEESSSHSHHHHHHHHHHTTSEEEETHHH CS
        BRCT  3 ellfhgckfvitgvldnftrdeleelikehGGkvttevskktthlvvgepesrslkylealklnipivheewl 75
                 ++++g+++++ ++ +  +r+e+ +++ ++G+++ ++++k++thlv+g+ ++ + k+ ++ +   +iv++ew+
  EPX74682.1  4 RKPLKGFVICC-TNIELNKRTEISTKAIKLGATYKSDLTKDVTHLVAGDFDTPKYKFAAKSRPDMKIVSHEWI 75
                79*********.777777********************************99999999999999********9 PP

  == domain 2  score: 50.3 bits;  conditional E-value: 8e-17
                 TEEEEEEESTSSHHHHHHHHHHHHTTCEEESSCSTTSSEEEESSSHSHHHHHHHHHHTTSEEEETHHHHHHH CS
        BRCT   8 gckfvitgvldnftrdeleelikehGGkvttevskktthlvvgepesrslkylealklnipivheewlldci 79 
                 +c +++ ++ ++ +r++le++i e+GG + +++++++thl++g++  ++ ky+ al+++i++v+ +wl++ci
  EPX74682.1 104 KCRVCL-TNIEQPDRSQLETTICENGGIFCPDLTRDVTHLIAGNT--DGRKYEYALRWKIKVVRVQWLWECI 172
                 699***.**************************************..999*********************8 PP

  == domain 3  score: 9.7 bits;  conditional E-value: 0.00037
                 TTTTTTEEEEEEESTSSHHHHHHHHHHHHTTCEEESSCSTTSSEEEESSS CS
        BRCT   3 ellfhgckfvitgvldnftrdeleelikehGGkvttevskktthlvvgep 52 
                 + lf++++f++  ++++ + + l++++   GG +++   ++t++++v + 
  EPX74682.1 297 PRLFDKIHFYL-YQFEEDKYNRLKKCLTREGGLISSTTEDTTSFVIVPHH 345
                 689********.77777777777***********9999999999998665 PP

  == domain 4  score: 25.8 bits;  conditional E-value: 3.4e-09
                 TTTEEEEEEESTSSHHHHHHHHHHHHTTCEEESSCSTTSSEEEESSS....HSHHHHHHHHHHTTSEEEETHHHHH CS
        BRCT   6 fhgckfvitgvldnftrdeleelikehGGkvttevskktthlvvgep....esrslkylealklnipivheewlld 77 
                 f g++f++ +++++ + + +++ + ++G++v + +  + + l+v ++     ++  k ++a  +n++++ ++wl++
  EPX74682.1 394 FAGLSFHL-SGFKGVDSSHIKKALILCGATVDNFLGVQRSVLLVNTNepfsMKTRYKIQHATGWNVRVLGISWLWH 468
                 99******.**********************************99999999888899*****************97 PP

>> BRCT_2  BRCT domain, a BRCA1 C-terminus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0    0.0011       3.2      14      69 ..      14      75 ..       5      77 .. 0.88
   2 !   35.4   0.0   3.6e-12   1.1e-08      16      83 ..     112     182 ..     102     184 .. 0.91
   3 !   24.5   0.0   9.1e-09   2.7e-05       2      83 ..     297     378 ..     296     380 .. 0.88
   4 !    6.6   0.0    0.0034        10       5      54 ..     394     442 ..     389     468 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0011
      BRCT_2 14 daeps.psreklkklIeknGGevvetitsavyiviaesneee.....laekrkrrvvspkyI 69
                +++ + ++r ++ ++ +k G + +++ t++v++++a   ++      ++++++ ++vs+++I
  EPX74682.1 14 CTNIElNKRTEISTKAIKLGATYKSDLTKDVTHLVAGDFDTPkykfaAKSRPDMKIVSHEWI 75
                55566699****************************99988899**99*************9 PP

  == domain 2  score: 35.4 bits;  conditional E-value: 3.6e-12
      BRCT_2  16 epspsreklkklIeknGGevvetitsavyiviaesneee...laekrkrrvvspkyIkdCikkgkllplen 83 
                 + +p+r++l++ I +nGG ++ + t++v+++ia +++      a + k +vv+++++ +Ci++g +l+ e 
  EPX74682.1 112 IEQPDRSQLETTICENGGIFCPDLTRDVTHLIAGNTDGRkyeYALRWKIKVVRVQWLWECIERGAVLESEY 182
                 5569**************************9999998889988888999*****************99876 PP

  == domain 3  score: 24.5 bits;  conditional E-value: 9.1e-09
      BRCT_2   2 sklFeglrFYindaepspsreklkklIeknGGevvetitsavyiviaesneee.laekrkrrvvspkyIkdCikkgkllplen 83 
                 + lF+ ++FY+  ++ +++ ++lkk+ +  GG +++t ++++ +vi++++    ++ + +  +++  +++ C+  + +lp+++
  EPX74682.1 297 PRLFDKIHFYL-YQFEEDKYNRLKKCLTREGGLISSTTEDTTSFVIVPHHLPIeEIPSFSVLIITEWWVERCLFFKNVLPVDE 378
                 689********.88999**********************99999999998655688888999999999999998888888776 PP

  == domain 4  score: 6.6 bits;  conditional E-value: 0.0034
      BRCT_2   5 FeglrFYindaepspsreklkklIeknGGevvetitsavyiviaesneee 54 
                 F gl+F + + +++ + +++kk  + +G +v +    +  ++++++ne  
  EPX74682.1 394 FAGLSFHL-SGFKGVDSSHIKKALILCGATVDNFLGVQRSVLLVNTNEPF 442
                 89******.78999*****************9999888888888888665 PP

>> LIG3_BRCT  DNA ligase 3 BRCT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.2   0.0    0.0044        13      32      72 ..      33      75 ..      29      77 .. 0.88
   2 !   23.6   0.0   1.6e-08   4.8e-05       3      79 ..     100     175 ..      98     177 .. 0.80
   3 ?   -3.4   0.1       4.2   1.3e+04      62      74 ..     456     468 ..     436     472 .. 0.72

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0044
   LIG3_BRCT 32 GdlvkeekekeaTHvvvskke..eskkekeksknakaVtaewi 72
                G  +k++ +k++TH v+ + +  + k  +++ ++ k V+ ewi
  EPX74682.1 33 GATYKSDLTKDVTHLVAGDFDtpKYKFAAKSRPDMKIVSHEWI 75
                567889999********977788889999999**********9 PP

  == domain 2  score: 23.6 bits;  conditional E-value: 1.6e-08
   LIG3_BRCT   3 pdiFtgvklfipksvedykklrRYfiAydGdlvkeekekeaTHvvvskkeeskkekeksknakaVtaewiwesIkkr 79 
                 p +F+  +++ + + +d+++l+  +  ++G +  ++ + ++TH ++ + +  k e +   + k+V ++w+we+I+++
  EPX74682.1 100 PALFKCRVCLTNIEQPDRSQLETTICENGG-IFCPDLTRDVTHLIAGNTDGRKYEYALRWKIKVVRVQWLWECIERG 175
                 555654455555566788888766666666.999999**********99999999*******************986 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 4.2
   LIG3_BRCT  62 knakaVtaewiwe 74 
                  n+++   +w+w+
  EPX74682.1 456 WNVRVLGISWLWH 468
                 4667777889997 PP

>> RTT107_BRCT_5  Regulator of Ty1 transposition protein 107 BRCT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.7   0.1    0.0046        14      16      85 ..       8      77 ..       2      99 .. 0.79
   2 !   11.8   0.0   5.6e-05      0.17      16      98 ..     103     183 ..      94     185 .. 0.89
   3 ?   -1.5   0.0      0.78   2.3e+03      73      98 ..     354     379 ..     353     381 .. 0.76

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0046
                   --EEEEESSS.TT..SSHHHHHHHHHTTEEE-SGCCT.-SEEE-SS---SHHHHHHCCCTT..EEE-CHHHHH CS
  RTT107_BRCT_5 16 vkiravlTgceeevnkedsdkkkLrklGikivqeakk.cntliApkilRTeKFLksLskap..kilspdfied 85
                     + +++T++e +  k  +  +k  klG +  ++ +k +++l+A     T K+  +    p  ki+s ++i  
     EPX74682.1  8 KGFVICCTNIELN--KRTEISTKAIKLGATYKSDLTKdVTHLVAGDF-DTPKYKFAAKSRPdmKIVSHEWIPR 77
                   567899****988..666666777789******99988******885.6888877777776789999999865 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 5.6e-05
                    --EEEEESSS.TT..SSHHHHHHHHHTTEEE-SGCCT-SEEE-SS---SHHHHHHCCCTTEEE-CHHHHHHHHHTS---SGGG CS
  RTT107_BRCT_5  16 vkiravlTgceeevnkedsdkkkLrklGikivqeakkcntliApkilRTeKFLksLskapkilspdfiedvLkkkklldleey 98 
                    +k r++lT++e+  + ++ ++++ ++ Gi + + ++++++liA +    +K+  +L  + k++ ++++ ++++++ +l+ e +
     EPX74682.1 103 FKCRVCLTNIEQP-DRSQLETTICENGGIFCPDLTRDVTHLIAGNT-DGRKYEYALRWKIKVVRVQWLWECIERGAVLESEYF 183
                    67899*****998.599**************************985.689***********************9988765544 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 0.78
                    CTTEEE-CHHHHHHHHHTS---SGGG CS
  RTT107_BRCT_5  73 kapkilspdfiedvLkkkklldleey 98 
                    ++  i+++ ++e +L  k++l ++e+
     EPX74682.1 354 FSVLIITEWWVERCLFFKNVLPVDEH 379
                    56679*********987677777766 PP

>> BRCT_3  BRCA1 C Terminus (BRCT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0     0.038   1.1e+02      43      78 ..      40      75 ..      18      77 .. 0.80
   2 ?    3.1   0.0     0.033     1e+02      64      89 ..     154     179 ..     142     184 .. 0.86
   3 ?    2.7   0.0     0.046   1.4e+02      67      93 ..     353     379 ..     334     385 .. 0.88

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.038
      BRCT_3 43 islgkldvvvtdsscpeevlkkaeqlkipvvSteWv 78
                ++ +++ +v  d + p+      ++ ++++vS eW+
  EPX74682.1 40 LTKDVTHLVAGDFDTPKYKFAAKSRPDMKIVSHEWI 75
                45567777888888898888899999*********8 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.033
      BRCT_3  64 kaeqlkipvvSteWviQsLIegevlk 89 
                  a + ki+vv ++W+ +++ +g vl+
  EPX74682.1 154 YALRWKIKVVRVQWLWECIERGAVLE 179
                 677889************98888775 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.046
      BRCT_3  67 qlkipvvSteWviQsLIegevlkydsh 93 
                 + ++ +++  Wv  +L  ++vl++d+h
  EPX74682.1 353 SFSVLIITEWWVERCLFFKNVLPVDEH 379
                 6778999*****************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (648 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       625  (0.0348597); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.64u 0.26s 00:00:00.90 Elapsed: 00:00:00.45
# Mc/sec: 4368.65
//
Query:       EPX74683.1  [L=951]
Description: transcription elongation factor Spt5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-28   98.2   0.1    3.6e-28   97.3   0.1    1.5  1  Spt5-NGN  Early transcription elongation factor of RNA pol II
    8.6e-25   87.1  61.5    1.1e-14   54.7  21.6    3.3  2  CTD       Spt5 C-terminal nonapeptide repeat binding Spt4
    6.9e-18   65.5  11.1    6.9e-18   65.5  11.1    3.6  3  Spt5_N    Spt5 transcription elongation factor, acidic N-term
      6e-15   54.6  18.9      3e-07   30.1   0.6    5.4  5  KOW       KOW motif
  ------ inclusion threshold ------
      0.055   12.9   5.9         19    4.8   0.0    4.5  5  ProQ_C    ProQ C-terminal domain


Domain annotation for each model (and alignments):
>> Spt5-NGN  Early transcription elongation factor of RNA pol II, NGN section
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.3   0.1     1e-31   3.6e-28       1      84 []     222     306 ..     222     306 .. 0.98

  Alignments for each domain:
  == domain 1  score: 97.3 bits;  conditional E-value: 1e-31
    Spt5-NGN   1 siwavkctagqErevalslmkkilelakken.leIkSvfapdelkGyiyvEAdrkaaveralegipnvrgvvqglvpikEvedll 84 
                 ++wa++c+ag+E++v++ +m+k+++l+ + + leI+S+f++d+l Gy+yvEA+++++v  al+gi nv+++++ lvpikE++dll
  EPX74683.1 222 NVWAIRCKAGKEKDVVFTIMRKAMDLQYTSMpLEIISAFQRDSLVGYVYVEARKQSHVLAALNGILNVYTNNMILVPIKEMPDLL 306
                 68************************9999999**************************************************97 PP

>> CTD  Spt5 C-terminal nonapeptide repeat binding Spt4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.7  21.6   3.2e-18   1.1e-14       1      58 [.     796     853 ..     783     854 .. 0.95
   2 !   47.4  31.9   5.7e-16   2.1e-12       1      70 [.     837     904 ..     837     947 .. 0.85

  Alignments for each domain:
  == domain 1  score: 54.7 bits;  conditional E-value: 3.2e-18
         CTD   1 gsrTPawns...aggsrTPawgadgsrTpayggagsrtPawnagskTPahgaagsrTPayk 58 
                 g+rTPa+++   ++g++TPaw+ +g++Tpa+++ g+rtPawn+g+kTPa++ ags+TPa++
  EPX74683.1 796 GARTPAYGTqgwQSGGKTPAWN-SGAKTPAWNA-GGRTPAWNSGNKTPAWN-AGSKTPAWN 853
                 78******999999*******7.6********8.*****************.********6 PP

  == domain 2  score: 47.4 bits;  conditional E-value: 5.7e-16
         CTD   1 gsrTPawnsaggsrTPawgadgsrTpayggagsrtPawnagskTPahgaagsrTPayktawd....gsrTpayg 70 
                 g +TPawn+  gs+TPaw+ +gs+Tpa+++ gs+tPawn+g+kTPa++  g +TP ++ + +     ++ p yg
  EPX74683.1 837 GNKTPAWNA--GSKTPAWN-SGSKTPAWNA-GSKTPAWNSGAKTPAWN-VGGKTPSWNAS-GptnaTAQAPMYG 904
                 689******..*******7.6********8.*****************.********433.2233334445444 PP

>> Spt5_N  Spt5 transcription elongation factor, acidic N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -6.5   9.2         5   1.8e+04       7      22 ..      52      68 ..      11      79 .. 0.59
   2 ?    0.8  28.0      0.28   9.9e+02       3      51 ..      79     123 ..      77     125 .. 0.66
   3 !   65.5  11.1   1.9e-21   6.9e-18       1      99 []     126     216 ..     126     216 .. 0.87

  Alignments for each domain:
  == domain 1  score: -6.5 bits;  conditional E-value: 5
                XXXXXX.XXXXXXXXXX CS
      Spt5_N  7 eVddde.eeeeeeeeve 22
                +V dd+  +e+ +ee +
  EPX74683.1 52 DVSDDQeHKEDVDEEPN 68
                44444412233333333 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.28
                 XXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXX CS
      Spt5_N   3 ddeAeVdddeeeeeeeeeveggeddfiaeeeaeeeeedserddrshrel 51 
                  deAe d+ eeee++++e+e++e++    ee+eee++  +r++++h++ 
  EPX74683.1  79 NDEAEEDEAEEEEDDDDELEDEEEE----EEEEEEAAGGRRKRARHERR 123
                 79********999999999999888....23333333344444444443 PP

  == domain 3  score: 65.5 bits;  conditional E-value: 1.9e-21
                 XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..X-GGGG-- CS
      Spt5_N   1 FiddeAeVdddeeeeeeeeeveggeddfiaeeeaeeeeedserddrshreldrrrqaeededaeeiaealeeRYgrsskkayrgeaeessevpqqlLLP 99 
                 F+d+eAeVd+deee ++ee+  g ed fi+ee      +d   ddr+hreldr+rq+ ++ dae++ae+++e+Ygr  +++  +++     vpq+lLLP
  EPX74683.1 126 FLDIEAEVDEDEEELDDEEDEIGREDGFIEEE---VGGADYVADDRRHRELDRQRQELQSVDAERLAEEYREKYGR--SQTLISDTSN---VPQRLLLP 216
                 9***********99999999889999998886...444555569******************************97..6666777666...*******9 PP

>> KOW  KOW motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   6.9e-06     0.025       1      26 [.     317     342 ..     317     350 .. 0.82
   2 ?   -4.8   8.3         5   1.8e+04       1      29 [.     455     483 ..     455     485 .. 0.91
   3 !   30.1   0.6   8.4e-11     3e-07       2      28 ..     505     531 ..     504     535 .. 0.92
   4 ?    0.2   0.0      0.23   8.3e+02      13      26 ..     633     646 ..     633     650 .. 0.80
   5 !   16.7   0.1   1.5e-06    0.0052       2      31 ..     712     741 ..     711     742 .. 0.94

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 6.9e-06
                 TTSEEEESSSTTTTCEEEEEEEETTT CS
         KOW   1 pGdhVkVvsGphkGktGkVvkvdqhk 26 
                 pG +V++ +G+++G+ ++V    ++ 
  EPX74683.1 317 PGAYVRIKRGKYAGDLAQVDNLSENG 342
                 8*****************98766655 PP

  == domain 2  score: -4.8 bits;  conditional E-value: 5
                 TTSEEEESSSTTTTCEEEEEEEETTTTEE CS
         KOW   1 pGdhVkVvsGphkGktGkVvkvdqhkvrV 29 
                 +Gd+V+V  G  +G  G+V+ v   +v++
  EPX74683.1 455 VGDIVEVFVGEQAGVGGVVETVHGTVVTI 483
                 7*********************9999776 PP

  == domain 3  score: 30.1 bits;  conditional E-value: 8.4e-11
                 TSEEEESSSTTTTCEEEEEEEETTTTE CS
         KOW   2 GdhVkVvsGphkGktGkVvkvdqhkvr 28 
                 Gd+VkV++G++k++tG+Vv++ ++ v+
  EPX74683.1 505 GDYVKVIAGKYKDDTGMVVRISKDEVT 531
                 9********************999876 PP

  == domain 4  score: 0.2 bits;  conditional E-value: 0.23
                 TTCEEEEEEEETTT CS
         KOW  13 kGktGkVvkvdqhk 26 
                 ++k+G+++++++  
  EPX74683.1 633 ENKEGTILHIYRAF 646
                 5799******9976 PP

  == domain 5  score: 16.7 bits;  conditional E-value: 1.5e-06
                 TSEEEESSSTTTTCEEEEEEEETTTTEEEE CS
         KOW   2 GdhVkVvsGphkGktGkVvkvdqhkvrVfv 31 
                 G +V++  Gp kG  G++++  + ++rV +
  EPX74683.1 712 GATVRIRKGPMKGLLGVIKDTTDANARVEL 741
                 99*************************986 PP

>> ProQ_C  ProQ C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       2.3   8.1e+03       5      17 ..     315     327 ..     313     329 .. 0.82
   2 ?    3.9   0.5      0.01        36       1      26 [.     449     474 ..     449     494 .. 0.85
   3 ?    4.8   0.0    0.0054        19       7      33 ..     504     531 ..     500     532 .. 0.83
   4 ?    2.1   0.0     0.036   1.3e+02       3      28 ..     619     643 ..     617     647 .. 0.87
   5 ?    0.9   0.1     0.086   3.1e+02      21      39 ..     726     744 ..     710     756 .. 0.72

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 2.3
                 S-TT--B---SSS CS
      ProQ_C   5 LkvGqqVkVklGk 17 
                 L  G+ V++k Gk
  EPX74683.1 315 LLPGAYVRIKRGK 327
                 667999****998 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.01
                 -SSSS-TT--B---SSSS---EEEEE CS
      ProQ_C   1 dlaeLkvGqqVkVklGkspmpAtile 26 
                 d+ae kvG+ V V +G+++  + ++e
  EPX74683.1 449 DHAEFKVGDIVEVFVGEQAGVGGVVE 474
                 57899*************98888887 PP

  == domain 3  score: 4.8 bits;  conditional E-value: 0.0054
                 TT--B---SSS.S---EEEEEE-SSSEE CS
      ProQ_C   7 vGqqVkVklGk.spmpAtileiaKddVr 33 
                  G+ VkV +Gk +  ++ ++ i+Kd+V+
  EPX74683.1 504 HGDYVKVIAGKyKDDTGMVVRISKDEVT 531
                 6999******9456789********995 PP

  == domain 4  score: 2.1 bits;  conditional E-value: 0.036
                 SSS-TT--B---SSSS---EEEEEE- CS
      ProQ_C   3 aeLkvGqqVkVklGkspmpAtileia 28 
                 +e+ vG++Vk  +G  ++++til i 
  EPX74683.1 619 TEIRVGDKVK-EVGGENKEGTILHIY 643
                 57899***99.899999*****9985 PP

  == domain 5  score: 0.9 bits;  conditional E-value: 0.086
                 -EEEEEE-SSSEEEEETTS CS
      ProQ_C  21 pAtileiaKddVrVqLasG 39 
                  ++i + +  ++rV+L++G
  EPX74683.1 726 LGVIKDTTDANARVELHTG 744
                 46888999999******99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (951 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1377  (0.0768029); expected 358.6 (0.02)
Passed bias filter:                      639  (0.0356406); expected 358.6 (0.02)
Passed Vit filter:                       165  (0.00920297); expected 17.9 (0.001)
Passed Fwd filter:                        40  (0.00223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.18u 0.35s 00:00:01.52 Elapsed: 00:00:00.53
# Mc/sec: 5364.60
//
Query:       EPX74684.1  [L=456]
Description: thyroid receptor interacting protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.9e-22   76.7   7.1    1.6e-21   76.0   7.1    1.4  1  zf-C2HC5  Putative zinc finger motif, C2HC5-type
  ------ inclusion threshold ------
       0.58   10.3   4.1       0.25   11.5   0.9    2.0  2  PH_BEACH  PH domain associated with Beige/BEACH


Domain annotation for each model (and alignments):
>> zf-C2HC5  Putative zinc finger motif, C2HC5-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.0   7.1   1.8e-25   1.6e-21       1      53 [.     193     244 ..     193     245 .. 0.96

  Alignments for each domain:
  == domain 1  score: 76.0 bits;  conditional E-value: 1.8e-25
    zf-C2HC5   1 rkkCnCqatrHpLleaapnClnCGkiiCakeglskpCsfCgspllsseerqel 53 
                 r++C+Cq+++HpL eaapnClnCGkiiC  eg+ +pC+fC++p++s++++ el
  EPX74684.1 193 RRSCDCQGRKHPLNEAAPNCLNCGKIICMLEGM-GPCTFCKAPVISKTQQLEL 244
                 589******************************.***************9887 PP

>> PH_BEACH  PH domain associated with Beige/BEACH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.9   2.8e-05      0.25      32      95 ..     257     319 ..     238     322 .. 0.82
   2 ?   -2.7   0.1       0.7   6.3e+03      19      38 ..     371     390 ..     360     414 .. 0.46

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 2.8e-05
    PH_BEACH  32 aseseeeseltadkkkkdkewklseikevhlrrYlLrktAlEiFladrtsllfnFe.skkerrkv 95 
                 +  +++++++  ++k+++++ + s+i+ ++    +L + A+E   ++r+++l+nF+ + ++r k+
  EPX74684.1 257 QAANQKTKSKHSSSKHQFQKLNNSSIHSIFIDPKQLEQKAIE--AEQRKNVLLNFDrTAAQRTKI 319
                 445566777788899999************************..699********9555566655 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.7
    PH_BEACH  19 kelvFtadseeeeaseseee 38 
                 k++v ++++e+++++    e
  EPX74684.1 371 KKVVVDQKDESSDEEVPIDE 390
                 55555444222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (456 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1707  (0.0952089); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 3054.07
//
Query:       EPX74685.1  [L=379]
Description: WDR55 family WD repeat protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.3e-05   22.5   7.1      8e-05   22.2   7.1    1.2  1  BUD22         BUD22
    0.00044   19.7   0.1      0.061   12.6   0.0    2.3  2  WD40_like     WD40-like domain
     0.0014   19.4   9.0        1.2   10.1   0.2    5.0  5  WD40          WD domain, G-beta repeat
     0.0016   18.9   0.7        3.9    8.1   0.0    3.5  4  PQQ_3         PQQ-like domain
  ------ inclusion threshold ------
      0.033   12.4   6.9      0.045   12.0   6.9    1.2  1  Nop14         Nop14-like family
      0.036   14.5   1.9       0.06   13.8   1.4    1.7  2  RNA_pol_Rpc4  RNA polymerase III RPC4
        1.2    8.1   3.5        1.6    7.6   3.5    1.2  1  DUF913        Domain of Unknown Function (DUF913)
        3.7    6.8  11.7        7.1    5.9  11.7    1.4  1  NOA36         NOA36 protein
        7.6    4.5  13.1         11    4.0  13.1    1.1  1  DNA_pol_phi   DNA polymerase phi


Domain annotation for each model (and alignments):
>> BUD22  BUD22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   7.1     4e-08     8e-05     224     287 ..     306     376 ..     240     379 .] 0.61

  Alignments for each domain:
  == domain 1  score: 22.2 bits;  conditional E-value: 4e-08
       BUD22 224 a........sddededeyneetdeesseesdssdssesasesesessekkkkkkkkkkkkakakkvtsstfL 287
                 +         dd++e+ ++ ++d+e+++++ +sd+se +s+s+s+++++++k +kk+ k+a++kkv ++ f 
  EPX74685.1 306 GselifwgtGDDSNES-NKADQDSEEESDETKSDESEDESSSDSDEPTQNSKRNKKSAKAAPKKKVPKTDFF 376
                 0333345554444444.3555555566666666666666666666666644444445555555555566665 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.7   0.0    0.0082        16      91     131 ..      26      66 ..      11      94 .. 0.87
   2 !   12.6   0.0   3.1e-05     0.061      12     109 ..     121     225 ..     110     229 .. 0.69

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.0082
   WD40_like  91 iddklliGtnkGsiyvfskdlqleevllgqsseIkeikien 131
                  +++ll+G ++G +  +s d +++ ++  ++++ ++i+  n
  EPX74685.1  26 EKNNLLVGFSNGRVANYSYDEENNSLVEEWNTKRHKISCRN 66 
                 4789****************9999*********99998875 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 3.1e-05
   WD40_like  12 gslilyGgkddkctvlkleslesvsivesfedSvifvklld..ddlilvvtl.DGtillsllenee.evenekieedistv.....kviddklliGtnk 101
                 +++++ G +d  +t+ + + +    +++s +d + ++  ++  +d ++v+t  DGt+l  + +n +  v +e+ ++d+++      ++ ++k+++Gt  
  EPX74685.1 121 NNIFATGDDDGCVTIWDRRKNG--GVLHSHRDQIDYISSISpfEDRFMVATSgDGTLLVLDARNFKsAVLSEEQDDDLTCGaftrdNNAKKKFAVGTAS 217
                 4445555555555666665554..55778889999988887556777777644****7777776667999999*****98622222456789******* PP

   WD40_like 102 Gsiyvfsk 109
                 G + +f k
  EPX74685.1 218 GVVTLFTK 225
                 **999975 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.1     0.097   1.9e+02      18      36 ..      70      87 ..      55      89 .. 0.80
   2 !   10.1   0.2   0.00061       1.2      22      38 .]     121     137 ..     109     137 .. 0.82
   3 ?    5.9   0.0     0.013        27       4      36 ..     142     177 ..     139     179 .. 0.71
   4 ?   -1.5   0.0       2.9   5.8e+03      26      35 ..     258     267 ..     250     268 .. 0.71
   5 ?    1.9   0.0      0.24   4.7e+02      10      32 ..     283     307 ..     275     317 .. 0.69

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.097
                EETTSSEEEEEETTSEEEE CS
        WD40 18 fspdgawlasGsdDgtvri 36
                +++++ +++ Gs D+ +++
  EPX74685.1 70 TDDNSEFISVGS-DCVLKL 87
                7899999999**.**9997 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00061
                 SSEEEEEETTSEEEEEE CS
        WD40  22 gawlasGsdDgtvriWd 38 
                 ++ +a+G+dDg v iWd
  EPX74685.1 121 NNIFATGDDDGCVTIWD 137
                 45579***********9 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.013
                 EEEEESS.SS...EEEEEEETTSSEEEEEETTSEEEE CS
        WD40   4 lrtltGH.ss...vtslafspdgawlasGsdDgtvri 36 
                  ++l  H +    ++s++   d  ++a+++ Dgt+ +
  EPX74685.1 142 GGVLHSHrDQidyISSISPFEDRFMVATSG-DGTLLV 177
                 567777864467799996666666688999.***976 PP

  == domain 4  score: -1.5 bits;  conditional E-value: 2.9
                 EEEETTSEEE CS
        WD40  26 asGsdDgtvr 35 
                   G+ Dg +r
  EPX74685.1 258 YIGGSDGCLR 267
                 44655**998 PP

  == domain 5  score: 1.9 bits;  conditional E-value: 0.24
                 SSS...EEEEEEETTSSEEEEEETTS CS
        WD40  10 Hss...vtslafspdgawlasGsdDg 32 
                 H+s   v   ++s +g +l+s+s   
  EPX74685.1 283 HTSkagVDTADVSENGEYLISAS-GS 307
                 522345766679*******9876.44 PP

>> PQQ_3  PQQ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0         9   1.8e+04      22      33 ..      28      39 ..      16      39 .. 0.75
   2 ?   -0.2   0.0       0.8   1.6e+03      19      35 ..     118     135 ..      98     139 .. 0.71
   3 !    8.1   0.0     0.002       3.9      21      40 .]     163     182 ..     153     182 .. 0.85
   4 !    6.4   0.0    0.0065        13      21      37 ..     254     270 ..     240     271 .. 0.79

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 9
       PQQ_3 22 glvyvgtgdGtl 33
                + + vg ++G++
  EPX74685.1 28 NNLLVGFSNGRV 39
                467888888886 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.8
       PQQ_3  19 vdgglvyvgtg.dGtlyA 35 
                 v g+ ++++++ dG ++ 
  EPX74685.1 118 VEGNNIFATGDdDGCVTI 135
                 568888888886777765 PP

  == domain 3  score: 8.1 bits;  conditional E-value: 0.002
       PQQ_3  21 gglvyvgtgdGtlyAlDaet 40 
                 ++  ++++gdGtl  lDa++
  EPX74685.1 163 DRFMVATSGDGTLLVLDARN 182
                 566678999*********85 PP

  == domain 4  score: 6.4 bits;  conditional E-value: 0.0065
       PQQ_3  21 gglvyvgtgdGtlyAlD 37 
                  +++y+g++dG l+ l+
  EPX74685.1 254 ADTLYIGGSDGCLRQLN 270
                 38*********998775 PP

>> Nop14  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   6.9   2.2e-05     0.045     372     423 ..     315     363 ..     249     375 .. 0.48

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.2e-05
       Nop14 372 eeeedeeeeedeeeeeeeeededdlsdleseeeeeedeleeelleeekkaae 423
                  ++++e+++ d+++e  ee+de ++++ e+e+++++de ++++ +++kk+a+
  EPX74685.1 315 GDDSNESNKADQDSE--EESDETKSDESEDESSSDSDEPTQNS-KRNKKSAK 363
                 233333333333332..22232222222222333333322111.11111111 PP

>> RNA_pol_Rpc4  RNA polymerase III RPC4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       2.7   5.5e+03      92     101 ..      90      99 ..      57     143 .. 0.79
   2 ?   13.8   1.4     3e-05      0.06      24      75 ..     321     369 ..     246     379 .] 0.61

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 2.7
  RNA_pol_Rpc4  92 hkSGkvelrl 101
                     SG+v+ ++
    EPX74685.1  90 TSSGRVTSKW 99 
                   5688888888 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 3e-05
  RNA_pol_Rpc4  24 aeddkseaesqsaekakaeeeskaekasgaeaeekkskkksskkkkkkkska 75 
                   +++ ++++e++s+e++++e e++++++s+++++++k +kks+   k++++k+
    EPX74685.1 321 SNKADQDSEEESDETKSDESEDESSSDSDEPTQNSKRNKKSA---KAAPKKK 369
                   111222222222222222222222233333333333333333...2222222 PP

>> DUF913  Domain of Unknown Function (DUF913)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   3.5   0.00082       1.6     271     320 ..     319     369 ..     269     378 .. 0.50

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.00082
      DUF913 271 kseasssssssetkeeekssededvemedaeeetesesdeseeseee.kek 320
                 ++++++++ s+e++ e+ks+e+ed+  +d++e+t++++++++++++  k+k
  EPX74685.1 319 NESNKADQDSEEESDETKSDESEDESSSDSDEPTQNSKRNKKSAKAApKKK 369
                 222222222222222223344444333333223333333222222221333 PP

>> NOA36  NOA36 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9  11.7    0.0036       7.1     243     303 ..     294     354 ..     274     360 .. 0.55

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0036
       NOA36 243 gsddddddeedsdydaylkalasgddeddegdedddddddeedddeeeddedeeeeeeees 303
                  s++ +   ++s+ +  +  ++ +++e++++d+d ++++de + de ed++ ++++e  ++
  EPX74685.1 294 VSENGEYLISASGSELIFWGTGDDSNESNKADQDSEEESDETKSDESEDESSSDSDEPTQN 354
                 3333333333333333333333446777778888888888777777777766666655443 PP

>> DNA_pol_phi  DNA polymerase phi
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0  13.1    0.0054        11     639     681 ..     314     356 ..     303     373 .. 0.51

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.0054
  DNA_pol_phi 639 edededeeddeeeeeeddeededseedddeeesdedeededde 681
                  +++d +e+++ ++++e+++++++s+e++de++sd+de +++++
   EPX74685.1 314 TGDDSNESNKADQDSEEESDETKSDESEDESSSDSDEPTQNSK 356
                  4444445555555555555555555444444444444433333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (379 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1452  (0.0809861); expected 358.6 (0.02)
Passed bias filter:                      841  (0.0469072); expected 358.6 (0.02)
Passed Vit filter:                       194  (0.0108205); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.66u 0.28s 00:00:00.94 Elapsed: 00:00:00.43
# Mc/sec: 2673.98
//
Query:       EPX74686.1  [L=649]
Description: phospholipase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.4e-199  662.8   2.3   3.1e-199  662.4   2.3    1.1  1  PLA2_B    Lysophospholipase catalytic domain
     0.0052   17.0   3.3      0.011   16.0   3.3    1.5  1  IBR       IBR domain, a half RING-finger domain


Domain annotation for each model (and alignments):
>> PLA2_B  Lysophospholipase catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  662.4   2.3  3.5e-203  3.1e-199       1     490 [.     130     606 ..     130     607 .. 0.98

  Alignments for each domain:
  == domain 1  score: 662.4 bits;  conditional E-value: 3.5e-203
      PLA2_B   1 iaiavSGGGyramltgaGvlkAldsRtdnatglgGlLqsatYlaGlsGgsWlvgslavNnftsvqelskkkeddsvweleksilnpeglelvknikryd 99 
                 +++a+SGGG+raml+gaG+  A+d+R +++++ +Gl+qsa+Y++GlsGgsWlvgs+a+Nnft+v  l++     +vw++e+s+++p +++ +k +++ +
  EPX74686.1 130 LGMAFSGGGFRAMLNGAGFFDAFDNRGKDSSKFSGLVQSAMYISGLSGGSWLVGSIAINNFTNVSYLQE-----NVWDMEHSVFSP-YSNPIKDAEYLN 222
                 699******************************************************************.....8***********.899999****** PP

      PLA2_B 100 eivdevekKkdagfnvsltDiwGralseklveaeeggvnltlsslkdaekfqeaemplPiivadgrkpgetvinlNatvfEfsPyelgswdaklnsFvp 198
                 ++ +e++ K+dagf++s+tD+wGr ls+klv+a++gg++lt+ss++++++f++ae+p+Pi+++d+r ++e++i  N+t+fEf+Pye+g+wd+++n+F+p
  EPX74686.1 223 HLREEIDAKQDAGFDTSITDLWGRSLSRKLVDAQRGGPGLTWSSIRNQSWFENAEYPYPILISDSRREDEHIIPENSTIFEFTPYEFGTWDNGINAFIP 321
                 *************************************************************************************************** PP

      PLA2_B 199 veylGtklsnGtvvkkgkcvagfdnaGflmgtsstlFnevlleinstsmlesllkellkkllkdlsedsedisqyapnpfkdaeeenqnatqsiveskt 297
                 +ey+Gt+l+ G+++ ++kcv+gfdnaGf+mgts+tlFne+ll++ns+     +  +l++++l+ +se+++di+ y+ npf++++  n+ +t+++++ +t
  EPX74686.1 322 MEYVGTHLNDGSPP-DNKCVRGFDNAGFVMGTSATLFNEALLRLNSNG----TWAHLARDILNRISENKNDIAPYP-NPFQNYTAKNTSVTNNFKNFPT 414
                 **************.******************************998....78999******************9.********************** PP

      PLA2_B 298 LdlvdggedgqniplvpllqkerevdvifaldnsadteeswpdgvslvatyeRvle...skqvkgkkfpyvpdqntfvnlgLnkrptffGcDarnltdl 393
                 +dlvdgged+qnip++pll+++r vdv+fa+d+++d +  wp g+slv+tyeR+++   +k+ ++++fpy+pd++tf++lgLn+rptffGcD+rn+t  
  EPX74686.1 415 VDLVDGGEDNQNIPIWPLLHPQRFVDVVFAVDSTDDDN-GWPTGSSLVRTYERIVRshhNKSIDVRGFPYIPDEDTFISLGLNARPTFFGCDGRNTTLK 512
                 ********************************887765.5***************9776777899********************************** PP

      PLA2_B 394 satvdestpPlvvylpnekysylsnlstfklsykdseregliengfeaatqdnetdddefaacvacaiirRklerknltlpsecekcFedycwngtv 490
                 + +vd++tpPlvvy+pn+++sy sn+stf++++++++ +++ien+  aatq+    +d+fa+c+aca+i+R++erkn+t+p++c+kcF++ycwngt+
  EPX74686.1 513 QDHVDNKTPPLVVYMPNYPWSYDSNISTFTFDLSNEHTDDIIENARLAATQNK---SDDFATCLACAVIQRSVERKNMTTPAQCKKCFQEYCWNGTT 606
                 ***************************************************97...9**************************************97 PP

>> IBR  IBR domain, a half RING-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   3.3   1.2e-06     0.011       4      51 ..     555     603 ..     552     611 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.2e-06
         IBR   4 eklklkkslesdpnlkwCprpdCeaiiekseg...cksvtCskCgfefCfn 51 
                 e+++l+++ +++ ++  C    C  i ++ e    ++ ++C+kC +e+C+n
  EPX74686.1 555 ENARLAATQNKSDDFATCL--ACAVIQRSVERknmTTPAQCKKCFQEYCWN 603
                 66777787788889*****..9**9998888844444499**********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (649 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       629  (0.0350828); expected 358.6 (0.02)
Passed bias filter:                      493  (0.0274974); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.29s 00:00:00.90 Elapsed: 00:00:00.45
# Mc/sec: 4351.34
//
Query:       EPX74687.1  [L=609]
Description: phospholipase B Plb1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   5.5e-176  585.8   6.0   6.6e-176  585.5   6.0    1.0  1  PLA2_B          Lysophospholipase catalytic domain
  ------ inclusion threshold ------
       0.87    9.8   4.6        4.5    7.5   0.2    3.3  3  GluR_Homer-bdg  Homer-binding domain of metabotropic glutamat


Domain annotation for each model (and alignments):
>> PLA2_B  Lysophospholipase catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  585.5   6.0  7.3e-180  6.6e-176       1     490 [.     112     592 ..     112     593 .. 0.97

  Alignments for each domain:
  == domain 1  score: 585.5 bits;  conditional E-value: 7.3e-180
      PLA2_B   1 iaiavSGGGyramltgaGvlkAldsRtdnatglgGlLqsatYlaGlsGgsWlvgslavNnftsvqelskkkeddsvweleksilnpeglelvknikryd 99 
                 i+ia+SGGG+raml  +G+++A+d+R+ n+t  +GlLq+++Y++G++Gg+W+vgs+a+Nnf++v+els+     +vw+l +++++p ++++v n ++y+
  EPX74687.1 112 IGIALSGGGFRAMLLDGGAISAMDARHSNHTIFSGLLQASDYIVGADGGAWTVGSMAINNFSTVEELSS-----NVWQLAHPVMYP-KSAIVFNGSFYK 204
                 8********************************************************************.....8***********.99********** PP

      PLA2_B 100 eivdevekKkdagfnvsltDiwGralseklveaeeggvnltlsslkdaekfqeaemplPiivadgrkpgetvinlNatv.fEfsPyelgswdaklnsFv 197
                 +++ +v+ K dagfnvsl+D+wGr+l++ + + ++g +n+++ss+ d++++++a++p+Pii++++ ++ ++ ++ N+t+ +E sP  +g++da++ +F+
  EPX74687.1 205 NLMSQVKAKLDAGFNVSLSDYWGRVLGRPFGDSHYGMPNVSYSSISDQDWYRNANFPYPIITFATNQNYDDQVDRNTTImLEASPDVFGTFDAGIDAFI 303
                 **************************************************************9999988889999998636****************** PP

      PLA2_B 198 pveylGtklsnGtvvkkgkcvagfdnaGflmgtsstlFnevlleinstsmlesllkellkkllk.dlsedsedisqyapnpfkdaeeenqnatqsives 295
                 p+eylGt l+nG+++ +g+cv ++dn+Gf+m+ sst+Fn+ ++++n++s   +++ ++++++lk ++se  e+++ ++ npf +++++++  ++++ ++
  EPX74687.1 304 PTEYLGTSLDNGASS-NGSCVVNYDNIGFMMALSSTYFNTQMRNFNDSS---TKNGRIIQQYLKsNFSEHGEQVAPIP-NPFRGISSARTSLANNLGDD 397
                 **************9.********************************9...7899999999997999*9******99.******************** PP

      PLA2_B 296 ktLdlvdggedgqniplvpllqkerevdvifaldnsadteeswpdgvslvatyeRvle...skqvkgkkfpyvpdqntfvnlgLnkrptffGcDarnlt 391
                 +tL++vd+  +g+n+pl+pl+qk r+vdvifa+dnsad+e+ wp+g+slv+tye vl+   + + ++k+fpyvp++++fv+l+ n+rp+ffGc +rn+t
  EPX74687.1 398 ETLNIVDTSLTGENLPLWPLIQKGRDVDVIFAVDNSADSEYVWPNGNSLVTTYEHVLRaqeNGNKNVKGFPYVPSSQSFVSLHYNDRPVFFGCNGRNTT 496
                 ******************************************************999865566779********************************* PP

      PLA2_B 392 dlsatvdestpPlvvylpnekysylsnlstfklsykdseregliengfeaatqdnetdddefaacvacaiirRklerknltlpsecekcFedycwngtv 490
                 +++  v+++tpPl++ylpn +++y++n+st +++y++++ ++l+ ng+ ++t+dn   +++f +cvaca+++R+ler+n+t+++ec++c++dycw+g +
  EPX74687.1 497 AGDRPVTRDTPPLIIYLPNVPWNYYTNISTDRTYYTKDQESNLLLNGLISSTMDN---ETYFGQCVACAVVKRTLERQNITASPECQQCYQDYCWSGII 592
                 ******************************************************9...99************************************976 PP

>> GluR_Homer-bdg  Homer-binding domain of metabotropic glutamate receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.1     0.026   2.3e+02       7      36 ..     233     262 ..     232     280 .. 0.80
   2 ?    7.5   0.2   0.00051       4.5      12      48 ..     312     351 ..     310     353 .. 0.80
   3 ?   -1.2   0.0      0.27   2.5e+03       5      20 ..     377     388 ..     375     399 .. 0.70

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.026
  GluR_Homer-bdg   7 PFRDsvaslssssgSPvsesaLcsppsprY 36 
                     PF Ds + + ++s S +s++  +   +  Y
      EPX74687.1 233 PFGDSHYGMPNVSYSSISDQDWYRNANFPY 262
                     9******************99996666555 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.00051
  GluR_Homer-bdg  12 vaslssssgSPvse...saLcsppsprYtsliLrdYsqSS 48 
                     ++ ++ss+gS v++    ++  + s++Y +  +r++  SS
      EPX74687.1 312 LDNGASSNGSCVVNydnIGFMMALSSTYFNTQMRNFNDSS 351
                     5678899999987621146779*****************9 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 0.27
  GluR_Homer-bdg   5 PSPFRDsvaslssssg 20 
                     P PFR     +ss+ +
      EPX74687.1 377 PNPFRG----ISSART 388
                     89***9....333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (609 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       524  (0.0292264); expected 358.6 (0.02)
Passed bias filter:                      421  (0.0234815); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.26s 00:00:00.87 Elapsed: 00:00:00.45
# Mc/sec: 4056.09
//
Query:       EPX74688.1  [L=505]
Description: triacylglycerol lipase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-37  128.1   0.4    3.2e-37  127.3   0.4    1.4  1  DUF3336   Domain of unknown function (DUF3336)
    2.2e-22   80.3   0.0    3.7e-22   79.5   0.0    1.3  1  Patatin   Patatin-like phospholipase


Domain annotation for each model (and alignments):
>> DUF3336  Domain of unknown function (DUF3336)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.3   0.4   3.6e-41   3.2e-37       8     136 ..       3     132 ..       1     133 [. 0.97

  Alignments for each domain:
  == domain 1  score: 127.3 bits;  conditional E-value: 3.6e-41
     DUF3336   8 rkklrkklrkattYeeWkeaAkeLDellgndeWkendes.yYdyklvkkvlkkLrklrekedlkellellrtclkrNfagienprLYsetyiGTKklie 105
                 +++l+ +++ a+tYe+W +aA++LD  +g+ eW+e++es +Y+yklv+++l++Lrk+r + ++  ++ +lr+++ r+fa+++n++LY+ +y GTK+li+
  EPX74688.1   3 KDELKFQMEYASTYEDWLQAAEKLDMAEGKYEWRERPESdEYNYKLVESRLHELRKIRLSGNVGVMFGVLRNSVARDFANLDNAQLYNYAYSGTKRLID 101
                 678999********************************************************************************************* PP

     DUF3336 106 eYidevekalellaetkqlsaeekleffket 136
                 e+i+ev  ++e+l e++++++e+kl+ f ++
  EPX74688.1 102 EFIQEVLLCVEFLEESPDVPIEQKLVEFSKL 132
                 *************************998765 PP

>> Patatin  Patatin-like phospholipase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.5   0.0   4.2e-26   3.7e-22       1     199 [.     141     335 ..     141     339 .. 0.89

  Alignments for each domain:
  == domain 1  score: 79.5 bits;  conditional E-value: 4.2e-26
     Patatin   1 LvlsGGGsrgafslgalkaLkkelgerfdiisGtSaGAiialllalg..rdpaalvddlrnlllnkifdrdllirelaanlaarlsgllgkgglfdaea 97 
                 L+lsGGG+ g  ++g+lk L +e g  + ii+G+SaGAi+a++ a       + l +++   +ln ++d +      +  l+a l+++++kg  +d  +
  EPX74688.1 141 LILSGGGTFGMNHIGVLKDL-HEQGLVPKIICGSSAGAIVACAAAVRntEEQKLLLKQFHTGDLNVFTDPN----LPPLSLWASLKQYFTKGCVLDIRH 234
                 89******************.********************999999555566678888888999999999....9*********************** PP

     Patatin  98 lrellrkvladktlkrlsarlgklpllkslftanqavpaittataatastanranglytedddddvdladavraSsafPglfppvsl......dge... 187
                 l++ ++ +++d t++++  r g +                  ++++++ + +   +l+++ ++++v +++av a++++P+lf+p +l      + e   
  EPX74688.1 235 LERVMKLLIGDYTFQEAFDRSGYV-----------------LNVTVSCGSSYEMPSLLNYITTPNVLIWSAVVATCSIPFLFQPATLwerdplTREiaa 316
                 ************************.................89***************************************88888655444222565 PP

     Patatin 188 .......lyvDGGilsNvP 199
                        l++DG++ + +P
  EPX74688.1 317 fcvtdapLWMDGSVDNDIP 335
                 5555566889999877776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (505 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       497  (0.0277205); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 3376.23
//
Query:       EPX74689.1  [L=186]
Description: hypothetical protein SOCG_02171 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       650  (0.0362541); expected 358.6 (0.02)
Passed bias filter:                      292  (0.0162865); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1349.83
//
Query:       EPX74690.1  [L=531]
Description: hypothetical protein SOCG_02172 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (531 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       937  (0.0522617); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.29s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 3621.83
//
Query:       EPX74691.1  [L=276]
Description: hypothetical protein SOCG_02173 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (276 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       497  (0.0277205); expected 358.6 (0.02)
Passed bias filter:                      290  (0.0161749); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1933.22
//
Query:       EPX74692.1  [L=384]
Description: sphingosine N-acyltransferase Lag1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-38  132.9  32.0    1.2e-38  132.9  32.0    2.1  2  TRAM_LAG1_CLN8  TLC domain
    1.7e-16   59.6   0.6    1.7e-16   59.6   0.6    2.7  2  TRAM1           TRAM1-like protein


Domain annotation for each model (and alignments):
>> TRAM_LAG1_CLN8  TLC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   2.4     0.021   1.9e+02     101     157 ..      76     136 ..      60     148 .. 0.65
   2 !  132.9  32.0   1.3e-42   1.2e-38       1     198 []     151     355 ..     151     355 .. 0.94

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.021
  TRAM_LAG1_CLN8 101 vvlllhelsdpflnlrkilsylkkk.....skssklvlfngllfllsFfvcRlvllpylill 157
                     ++++l++l +   ++  ++    kk      k+ k++lf +l++++ F+ +R +++ y+++ 
      EPX74692.1  76 LCIFLYYLPSTRSYVEPFMVLSYKKadgvyGKGPKDLLF-SLFWVINFTAIRSIVMDYCFCP 136
                     444555555555555444444423355555555889999.8888888*******99987654 PP

  == domain 2  score: 132.9 bits;  conditional E-value: 1.3e-42
  TRAM_LAG1_CLN8   1 kfdervvslvqyllstvfglivlsssp......elwegyperilgathfllkayyllalgYfiydllvlllyekkrkdfvemliHhiitlvllvl 89 
                     +f+e+++ +++yl ++++g++++++s       +l+e+yp++ +++   l+k+yyl++ g+++++++vl + e++r d+++m++Hhi+t+ l++l
      EPX74692.1 151 RFCEQGYCFLYYLTFWILGFYIYRTSGywdheeQLFEQYPQYYMTK---LFKFYYLVQFGFWLQQIYVLHV-EQRRADHWQMFAHHIVTCSLIIL 241
                     699***********************97777777777779888888...**********************.77888****************** PP

  TRAM_LAG1_CLN8  90 syvrnlgrvglvvlllhelsdpflnlrkilsylkkkskssklvlfngllfllsFfvcRlvllpylillsildvaklslstap..........lwl 174
                     sy++n++rvg ++l++++lsd +++ +k+++yl +   +++++lf   lf++s+++ R++l+ y il+++++ a++ +               ++
      EPX74692.1 242 SYCFNFLRVGNAILYIFDLSDYIFSGSKMIKYL-GF-GKICDYLF--GLFMMSWIYSRHYLF-YRILKVVVTSAPRIIGGFHmdlsrgyifnERI 331
                     *********************************.99.889*****..***************.88999999999877765448********999* PP

  TRAM_LAG1_CLN8 175 pliflilllvLqllnlyWfylivk 198
                     ++ f++ll+ Lq+l ++Wf +ivk
      EPX74692.1 332 YYAFIFLLFSLQILIYIWFGMIVK 355
                     **********************97 PP

>> TRAM1  TRAM1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.6   0.6   1.9e-20   1.7e-16       2      64 .]      91     147 ..      75     147 .. 0.94
   2 ?   -0.3   1.2     0.097   8.7e+02      29      43 ..     160     174 ..     151     176 .. 0.81

  Alignments for each domain:
  == domain 1  score: 59.6 bits;  conditional E-value: 1.9e-20
       TRAM1   2 skFifLsynvplsansetglYgkGlkDlafvffyvivftflRaflmeyvlrPlarrlgikkkk 64 
                 ++F+ Lsy      ++++g YgkG+kDl+f +f+vi ft +R+++m+y++ P+   +gi+k+k
  EPX74692.1  91 EPFMVLSY------KKADGVYGKGPKDLLFSLFWVINFTAIRSIVMDYCFCPFILSWGIRKRK 147
                 57888898......6789*******************************************98 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.097
       TRAM1  29 lafvffyvivftflR 43 
                 l+++ f+++ f + R
  EPX74692.1 160 LYYLTFWILGFYIYR 174
                 8999******99998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (384 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       684  (0.0381505); expected 358.6 (0.02)
Passed bias filter:                      302  (0.0168442); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2769.01
//
Query:       EPX74693.1  [L=474]
Description: moeb/ThiF domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.2e-46  158.2   0.0    3.3e-46  157.6   0.0    1.1  1  ThiF             ThiF family
    1.1e-05   25.7   0.1    0.00015   22.0   0.2    2.7  2  Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding doma
     0.0066   16.0   0.0      0.016   14.8   0.0    1.6  1  UDPG_MGDP_dh_N   UDP-glucose/GDP-mannose dehydrogenase family
  ------ inclusion threshold ------
       0.12   11.6   0.0       0.18   11.0   0.0    1.3  1  FAD_binding_3    FAD binding domain


Domain annotation for each model (and alignments):
>> ThiF  ThiF family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.6   0.0   7.3e-50   3.3e-46       2     237 ..      99     373 ..      98     382 .. 0.87

  Alignments for each domain:
  == domain 1  score: 157.6 bits;  conditional E-value: 7.3e-50
                 HHHHHHHHHHHHHHHHTSEEEEE--SHHHHHHHHHHHHHTTTEEEEEESSB--GGGGGTBTTS-GGGTTSBHHHHHHHHHHHT-TTSEEEEEES-CCGC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        ThiF   2 srqlallgedgqekLrdskvllvGaGglGsellknLalsGvgkltlvDnDkielsNlnRqflfreediGkpKaevaaealqeinpdveveavteritde 100
                 +r++a++ge+g++ Lr+s v++vG+Gg+Gs++ ++La+sGv+k++++D+D+++ls lnR+ +++ ed+G+pK+ ++++a+++++p+ve+ea +  +++e
  EPX74693.1  99 ARNYAFFGEEGMANLRNSFVVVVGCGGVGSWATVMLARSGVQKIRIIDFDQVSLSSLNRHAIANLEDVGTPKTLALKRAIKRFAPWVEIEACNTLFNPE 197
                 699***********************************************************************************************9 PP

                 CS-HHHHTT-.SEEEEESSSHHHHHHHHHHHHHHT-EEEEEEEETTEEEEEEE.EE.....CCS-ECTSS-............T..GGS.EECCCCEEH CS
                 xxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xx.....xxxxxxxxxx............x..xxxxxxxxxxxxx RF
        ThiF 101 tvleellesv.DlVvdalDniearrlvnracvkkgiplieagtlgfegqvvvi.ip.....gktgcyeCld............p..sstedptekkvpl 178
                 + ++ell++   +V+da+Dni++++ +  +c++++i++i ++ + ++++ + + i      ++++  + ++            p  +s+e+p+++k+ l
  EPX74693.1 198 S-ADELLSGSpSFVIDAIDNIQTKVDLLAYCYYNQIQVIASTGSSCKSDPTRMnIAdisatSEDPLSRATRrrlrlkgvmegiPvaFSSEKPDPRKATL 295
                 8.6788776669*************************************99996334557788888888887776666655542789999999999999 PP

                 HH..................HHHCT....E-B-HHHHHHHHHHHHHHHHHHHTTBCGGGCCEEEECCTTTTEEEEECCEEE CS
                 xx..................xxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        ThiF 179 ct..................siagn....ipaiatttavvaglaalellkllsgkeklenslltqvdllesrfenvelera 237
                 +                   +        +p+i+++++++++ +a+++l+ + + ++   s+  + +l+e   ++++ e+ 
  EPX74693.1 296 LPlaeeefekgdvdqlsalpE---FrtriLPVIGPMPGIFGLTLATHVLTRIAKYPMDPISTQVRPRLYEEAVKRLHAEAR 373
                 978888888877777765553...044589**********************88887777777788888887777777664 PP

>> Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.2   3.3e-08   0.00015       1      98 [.     118     236 ..     118     261 .. 0.88
   2 ?   -0.7   0.0      0.36   1.6e+03      99     127 ..     354     377 ..     299     379 .. 0.73

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 3.3e-08
                      EEEE--SHHHHHHHHHHHCTCCT-GEEEEEESSHHHHHHHHCHH.....................TTTCEEEEE--T.TTHHHHHHHHHTTS.S CS
  Sacchrp_dh_NADP   1 vliiGaGsvGqavaellarhfdvdaeitvadrskeklealaaka.....................lgvrfeaialda.enyeavLaallkeg.d 71 
                      v+++G+G+vG+ ++ +lar++    +i ++d+++ +l  l  +a                       + +e++a++   n+e+  ++ll++   
       EPX74693.1 118 VVVVGCGGVGSWATVMLARSGVQ--KIRIIDFDQVSLSSLNRHAianledvgtpktlalkraikrFAPWVEIEACNTlFNPES-ADELLSGSpS 208
                      89******************987..9***********999999999***************9998777888888865166666.********** PP

                      EEEE-SSGG.GHHHHHHHHHHHT-EEEE CS
  Sacchrp_dh_NADP  72 lvvnlsppi.ssldvlkaCietgvhyvd 98 
                      +v++++ +i    d+l++C+ +++ ++ 
       EPX74693.1 209 FVIDAIDNIqTKVDLLAYCYYNQIQVIA 236
                      *********7777*******99999886 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.36
                      SS-BCGCCSCHCCSHHHHHTHHHHHHCTS CS
  Sacchrp_dh_NADP  99 tsiskeertnyalreavlklkekakeagv 127
                      t++      +  ++eav +l+++a++a+v
       EPX74693.1 354 TQV-----RPRLYEEAVKRLHAEARNANV 377
                      444.....566688999999999999887 PP

>> UDPG_MGDP_dh_N  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   3.5e-06     0.016       3      46 ..     118     162 ..     116     182 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 3.5e-06
                     EEEE--STTHHHHHHHHHHCT.SEEEEE-S-HHHHHHHCTTS-SS CS
  UDPG_MGDP_dh_N   3 isviGlGYvGlvtaavlaeig.hevigvDideekvdklnsgkipi 46 
                     ++v+G G vG    ++la+ g  ++ ++D d+   ++ln+  i  
      EPX74693.1 118 VVVVGCGGVGSWATVMLARSGvQKIRIIDFDQVSLSSLNRHAIAN 162
                     78*******************778999************998765 PP

>> FAD_binding_3  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0     4e-05      0.18       4      31 ..     118     146 ..     115     193 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 4e-05
                    EEEE--SHHHHHHHHHHHHTTHH.EEEEE CS
  FAD_binding_3   4 VlIVGaGpaGlmlallLseaGvr.vvlve 31 
                    V++VG G +G  ++ +L++ Gv+  ++++
     EPX74693.1 118 VVVVGCGGVGSWATVMLARSGVQkIRIID 146
                    99********************9556776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (474 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       463  (0.0258241); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.41
# Mc/sec: 3464.18
//
Query:       EPX74694.1  [L=508]
Description: RNA-binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.2e-05   23.0   0.0    0.00035   20.3   0.0    2.2  2  KH_1            KH domain
  ------ inclusion threshold ------
      0.021   13.0   0.3       0.03   12.4   0.3    1.2  1  Sporozoite_P67  Sporozoite P67 surface antigen


Domain annotation for each model (and alignments):
>> KH_1  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.15   1.4e+03      20      33 ..     166     179 ..     164     188 .. 0.87
   2 !   20.3   0.0   3.9e-08   0.00035      12      61 ..     286     345 ..     282     350 .. 0.68

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.15
                 HHHHHHHHHHT-EE CS
        KH_1  20 snIkeIreetgakI 33 
                 s++ eI+ ++g++ 
  EPX74694.1 166 STLSEIEHKSGVQL 179
                 899*****99*986 PP

  == domain 2  score: 20.3 bits;  conditional E-value: 3.9e-08
                 HHHHTGGGHHHHHHHHHHT-EEEEES.STT.........T.-EEEE..EE.SHHHHHHHH CS
        KH_1  12 griIGkgGsnIkeIreetgakIkvpk.sedeg......sderevti..sG.speavekAk 61 
                  +++G++G+ +k+I++et +++++ + +++        ++++ +++     ++++++kAk
  EPX74694.1 286 QAVVGPQGAYVKHIQQETRTRVQIKGqGSAFIepstnrESDEPLHLciMShDMNNIQKAK 345
                 689********************9853443337766663333333322566666666665 PP

>> Sporozoite_P67  Sporozoite P67 surface antigen
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.3   3.4e-06      0.03     105     212 ..     366     482 ..     296     492 .. 0.58

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 3.4e-06
  Sporozoite_P67 105 ineddkGskedseedddeeeeednkstsskdgkgskkaqpgvssssgsttsqtdlstkl...sqtglgasGshaqqdpavsvsgv.......... 186
                      +e+++Gs+  ++++            ssk +  s+ + p + + s  +  + +ls++      t ++a+G      pav +             
      EPX74694.1 366 YREGGQGSQAYKQSNRS-----HYSNRSSKAETPSNHGTPPMTNVSPAANFNAPLSSTSvvpPGTSVTAAGYPPGMSPAVPMISPsmpyvygapg 455
                     33444444443333332.....3344566777777776665444444433333333322011234444444443333333211112233333333 PP

  Sporozoite_P67 187 .vgvpGlgvpGvGvpGvggvgvlpgvg 212
                       g pG+ +pGvG+p     g+ p   
      EPX74694.1 456 mSGPPGIDAPGVGIPAMSAPGADPYAA 482
                     399999999999999988888877655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (508 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       774  (0.0431703); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 3588.76
//
Query:       EPX74695.1  [L=157]
Description: SUMO conjugating enzyme Hus5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.1e-47  160.3   0.0    2.4e-47  160.1   0.0    1.0  1  UQ_con     Ubiquitin-conjugating enzyme
    0.00049   19.8   0.0    0.00059   19.5   0.0    1.1  1  Prok-E2_B  Prokaryotic E2 family B
  ------ inclusion threshold ------
      0.023   15.0   0.6      0.034   14.4   0.6    1.6  1  RWD        RWD domain


Domain annotation for each model (and alignments):
>> UQ_con  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  160.1   0.0     4e-51   2.4e-47       1     138 [.       8     150 ..       8     152 .. 0.97

  Alignments for each domain:
  == domain 1  score: 160.1 bits;  conditional E-value: 4e-51
                 HHHHHHHHHHHSTTTTEEEEEEET....TEECEEEEEEEB.TTSTTTTEEEEEEEE--TTTTTS--EEEESST-SCTTBETTSBB-CGGGSTTT.--TT CS
      UQ_con   1 rlqkelkelakkkpsgisaklvdd....enlfewkvlikgpedtpYeggvFklelefpedYPlkpPkvkfvtkifHPnvdksGevcldiLkeek.Wspa 94 
                 rlq+e k++++++p g+ ak++++     +l++w+v i g+++t +egg++kl+++fpe+YP +pPk++f+ ++fHPnv++sG+vcl+iL+ee+ W+pa
  EPX74695.1   8 RLQEERKQWRRDHPFGFFAKPSKSsdggLDLMNWTVGIPGKPKTSWEGGLYKLTMTFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILNEEEgWKPA 106
                 89********************95557899*************************************************************8889**** PP

                 SHHHHHHHHHHHHHHS--TTS-SSHHHHHHHHHTHHHHHHHHHH CS
      UQ_con  95 ltlesvllsiqsLlaepnpesplnkeaakllkkdreeykkkvke 138
                 +t++++ll iq Ll++pn  sp+++ea++++kkd+ ey+++v++
  EPX74695.1 107 ITIKQILLGIQDLLNDPNIASPAQTEAYTMFKKDKIEYERRVRA 150
                 *****************************************986 PP

>> Prok-E2_B  Prokaryotic E2 family B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   9.9e-08   0.00059      34     116 ..      54     132 ..      24     151 .. 0.86

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 9.9e-08
   Prok-E2_B  34 sggtvdlrlvypdsfpllppavflqdpeqlkllpHintfggaLClleeeldldewdpngsvadvleqlqqvLn.egisgdedae 116
                 +gg ++l++ +p+++p+ pp+ + + p      p +++ +g +Cl     + + w+p+ +++++l  +q++Ln  +i++  + e
  EPX74695.1  54 EGGLYKLTMTFPEEYPTRPPKCRFTPPL---FHPNVYP-SGTVCLS-ILNEEEGWKPAITIKQILLGIQDLLNdPNIASPAQTE 132
                 89*************************9...89*****.******4.4777889*******************99999998555 PP

>> RWD  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.6   5.6e-06     0.034      53      78 ..      56      81 ..       4     156 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 5.6e-06
                EEEEEEEEE-SSTTSS--EEEEEECC CS
                xxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RWD 53 pslkleiklpeeYPeeaPiislsste 78
                  +kl++++peeYP+++P+ +++ + 
  EPX74695.1 56 GLYKLTMTFPEEYPTRPPKCRFTPPL 81
                5689**************98887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       375  (0.0209158); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1145.59
//
Query:       EPX74696.1  [L=74]
Description: 60S ribosomal protein L38 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.7e-33  113.4   1.0    4.1e-33  113.3   1.0    1.0  1  Ribosomal_L38e  Ribosomal L38e protein family


Domain annotation for each model (and alignments):
>> Ribosomal_L38e  Ribosomal L38e protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.3   1.0   2.3e-37   4.1e-33       1      69 []       2      70 ..       2      70 .. 0.98

  Alignments for each domain:
  == domain 1  score: 113.3 bits;  conditional E-value: 2.3e-37
  Ribosomal_L38e  1 PkeikdiKeFLeiarrkDaksvkikknkkdntKfKvRcsryLYTLvvkdkekaeklkqsLppglkvkei 69
                    P++++diK FL++a+r Da+s+++kkn+++++KfK+Rcs+yLYTLvv+d++kaekl+qsLpp l+v e+
      EPX74696.1  2 PRQVTDIKLFLQLAHRGDATSARVKKNQNKDVKFKLRCSKYLYTLVVADAKKAEKLRQSLPPALTVAEV 70
                    9****************************************************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       582  (0.0324614); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.26s 00:00:00.63 Elapsed: 00:00:00.42
# Mc/sec: 533.59
//
Query:       EPX74697.1  [L=442]
Description: hemolysin-III family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.6e-57  193.0  27.5    7.2e-57  192.7  27.5    1.1  1  HlyIII         Haemolysin-III related
  ------ inclusion threshold ------
      0.019   15.1   9.4      0.019   15.1   9.4    2.4  2  EamA           EamA-like transporter family
       0.13   11.9   0.1       0.33   10.6   0.0    1.6  2  Binary_toxB_2  Clostridial binary toxin B/anthrax toxin PA do
       0.19   11.2   0.0       0.29   10.6   0.0    1.2  1  Arfaptin       Arfaptin-like domain
        2.9    8.1   7.1       0.37   11.0   0.3    2.6  2  DUF3493        Low psii accumulation1 / Rep27


Domain annotation for each model (and alignments):
>> HlyIII  Haemolysin-III related
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  192.7  27.5     2e-60   7.2e-57       3     224 .]     204     424 ..     202     424 .. 0.96

  Alignments for each domain:
  == domain 1  score: 192.7 bits;  conditional E-value: 2e-60
      HlyIII   3 lhnEtlniwtHllgailfivlailllslaevken.sklakvvvlvfllgallcllcSalyHtlsihseeklrkffaklDysgIslliagsylplilyal 100
                 lhnEt+niwtHl++++ f++++ ++++l++ +   s ++++v ++fl++a++cl cS+++Ht+s+ s+ ++ +  a++Dy+gIs+lia+s++++++ a+
  EPX74697.1 204 LHNETFNIWTHLIAFLGFLMVTSYFYPLSTSWISsSVSNRIVRVFFLVCAMKCLACSVTWHTFSSLSKYEHMRRAACMDYVGISALIAASIIAVEFHAF 302
                 7*****************999999999999998888899************************************************************ PP

      HlyIII 101 akapkagllylslilalgvlgiisklvplfsrpearplravlfillgllgvipllhlllvltqlgeaaelalvllvlggvlylvGavfYalrvPErlkp 199
                 +++  ++ ly++++  lg +gi++ +  +f+  ++r +++ +f+ l+++g +pll+ + ++++++ ++ + l+ +++++++y++G++fYal++PE+l p
  EPX74697.1 303 KCHSMFRVLYIAVTGSLGCIGIYMPWKEWFNDYNYRSFKIFFFVGLACSGFLPLLT-MCYIQGTS-STLIYLKPVFMSIFSYIIGVIFYALHIPEKLNP 399
                 ********************************************************.88888666.45799**************************** PP

      HlyIII 200 gkfdivghsHqiFHvfvvlgalfhy 224
                 g fdivg+sHq++H+ +++g+ fhy
  EPX74697.1 400 GIFDIVGNSHQLWHIAIIIGIGFHY 424
                 ************************8 PP

>> EamA  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.6     0.079   2.8e+02      31      55 ..     207     235 ..     196     274 .. 0.57
   2 ?   15.1   9.4   5.2e-06     0.019      11     112 ..     288     384 ..     278     393 .. 0.81

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.079
        EamA  31 ltltfvrfliagilllii....allkegk 55 
                  t++ ++ lia++ +l++    ++l+ ++
  EPX74697.1 207 ETFNIWTHLIAFLGFLMVtsyfYPLSTSW 235
                 57777777777777766533223333333 PP

  == domain 2  score: 15.1 bits;  conditional E-value: 5.2e-06
        EamA  11 alfwaiyfvlskillrkvspltltfvrfliagillliiallkegklaklslkdwllllllgllgtvlafllffyalkktsasnaslitslePvftlils 109
                 al+ a+ + +  ++  k+++++ + +  + +++ ++ i+++++++++ ++++++++++++gl ++ + +ll +  ++ ts++    +++l Pvf+ i+s
  EPX74697.1 288 ALIAASIIAVEFHA-FKCHSMFRVLYIAVTGSLGCIGIYMPWKEWFNDYNYRSFKIFFFVGLACSGFLPLLTMCYIQGTSST----LIYLKPVFMSIFS 381
                 33333333333333.456777777788899***********************************************98865....8899999999999 PP

        EamA 110 vll 112
                 +++
  EPX74697.1 382 YII 384
                 987 PP

>> Binary_toxB_2  Clostridial binary toxin B/anthrax toxin PA domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   9.1e-05      0.33     122     160 ..      86     124 ..      73     137 .. 0.89
   2 ?   -2.8   0.1       1.1   4.1e+03      50     109 ..     224     285 ..     205     294 .. 0.66

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 9.1e-05
                    EEEEETTTEEEEEEE-TSSS-SSEB-TTEESS-TTS--E CS
  Binary_toxB_2 122 tslvlgknqtlatikakenqlsqilapnnyypsknlapi 160
                     s +lgknq +  ++  e++  ++la  + +psk l  +
     EPX74697.1  86 GSTILGKNQVMYFLRMIEEKYHDVLAACDSFPSKALKAL 124
                    5789******************************99754 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.1
                    EECCCSSSSSS.EBTSCES-EEEEEEE.EESESSSSEESHHHHHT--TTSBEEEEEEEEEEE CS
  Binary_toxB_2  50 vhasffdiggs.vsagfsnsnsstvai.dhslslagertwaetmglntadtarlnaniryvn 109
                    v + f+ +  s +s+ +sn       +      la   tw     l   +  r  a + yv 
     EPX74697.1 224 VTSYFYPLSTSwISSSVSNRIVRVFFLvCAMKCLACSVTWHTFSSLSKYEHMRRAACMDYVG 285
                    55555555554355566665554443303344688889999888888888888888888885 PP

>> Arfaptin  Arfaptin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   8.2e-05      0.29      41     111 ..      98     168 ..      93     175 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 8.2e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH..H-CCGHHHHHHHHHHHHHHHHHHHHHH CS
    Arfaptin  41 vlreiketykelvklaknlskallklsqtekelGdvfkdlskrekqealgeaftatgealrllakqgeall 111
                  lr i+e+y++++++ + + ++ lk +++ ++l + ++d++  e+  ++ge f+ t e+l+++ + ge+ l
  EPX74697.1  98 FLRMIEEKYHDVLAACDSFPSKALKALNVLESLLSDLEDIANVESRTTVGEIFEDTKEKLQSAIRAGESRL 168
                 5899***************99999999999999999**********************9999888777655 PP

>> DUF3493  Low psii accumulation1 / Rep27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   1.6      0.63   2.3e+03      27      43 ..     285     301 ..     277     326 .. 0.79
   2 ?   11.0   0.3    0.0001      0.37      15      37 ..     337     359 ..     336     365 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.63
     DUF3493  27 aaSaliGalifllrlla 43 
                 ++Sali+a i+++++ a
  EPX74697.1 285 GISALIAASIIAVEFHA 301
                 78899999888876655 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.0001
     DUF3493  15 fRglRlflYlafaaSaliGalif 37 
                 +R++++f+++++a S+++ +l++
  EPX74697.1 337 YRSFKIFFFVGLACSGFLPLLTM 359
                 9*****************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (442 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       724  (0.0403815); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.51u 0.29s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 3080.51
//
Query:       EPX74698.1  [L=449]
Description: DNA recombination protein Rad22 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.9e-58  196.8   0.0    3.1e-58  196.0   0.0    1.3  1  Rad52_Rad22  Rad52/22 family double-strand break repair prote


Domain annotation for each model (and alignments):
>> Rad52_Rad22  Rad52/22 family double-strand break repair protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  196.0   0.0   1.7e-62   3.1e-58       2     148 ..      27     173 ..      26     177 .. 0.97

  Alignments for each domain:
  == domain 1  score: 196.0 bits;  conditional E-value: 1.7e-62
  Rad52_Rad22   2 ietlqskLekklgpeyvsqregksgkkvaylegskviqlaNevFgfnGWsseiesievdeieeeqegqrysvkaealvrvtlkdGtyrediGfgtatn 99 
                  ++ lq+ L +klgpeyvs r g++g +v+y+e++k+i+laNe+FgfnGWss+i+s+++d+++e++e++r+s++++++vrvt+kdG y+ediG+g+++n
   EPX74698.1  27 YQYLQASLTRKLGPEYVSRRSGPGGFSVSYIESWKAIELANEIFGFNGWSSSIRSVNIDFLDENKETNRVSLGLSVVVRVTIKDGAYHEDIGYGSIDN 124
                  6789********************************************************************************************** PP

  Rad52_Rad22 100 vpskgeafekakKeAvtdAlKrAllqfgnvlGnclydleqekkvkklkk 148
                  +++k++afek+kKe++tdAlKrAl++fgn+lGnc+yd+ +  ++ k+k 
   EPX74698.1 125 CRGKASAFEKCKKEGTTDALKRALRNFGNSLGNCMYDKYYLREIGKMKP 173
                  *****************************************99999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (449 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       496  (0.0276647); expected 358.6 (0.02)
Passed bias filter:                      263  (0.014669); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 3268.51
//
Query:       EPX74699.1  [L=609]
Description: methylenetetrahydrofolate reductase Met9 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.1e-123  410.7   0.0   4.5e-123  410.1   0.0    1.2  1  MTHFR     Methylenetetrahydrofolate reductase


Domain annotation for each model (and alignments):
>> MTHFR  Methylenetetrahydrofolate reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  410.1   0.0  2.5e-127  4.5e-123       6     287 .]      10     293 ..       5     293 .. 0.98

  Alignments for each domain:
  == domain 1  score: 410.1 bits;  conditional E-value: 2.5e-127
                 HT..SS-EEEEEE---SSHHHHHHHHHHHHHHGGGG.-SEEEE---CCCTTHHHHHHHHHHHHHHH-S-EEEEEESTTS-HHHHHHHHHHHHHCT--EE CS
       MTHFR   6 le.egkalisfEffpPkteegernLleridrleevk.plfvdvTwgaggstaeltssiakviqqelgleailhlTctdaskeeldkalekakelGirni 102
                  + ++k++ s+EffpPkt++g +nL++ridr++e++ p+fvdvTwgaggst++lt  i++v+q++++l++++hlTct++s e+++ al+ka+++G+rn+
  EPX74699.1  10 SDwKDKITWSYEFFPPKTSTGIQNLYNRIDRMKEWGyPMFVDVTWGAGGSTSDLTPVIVNVAQKDFQLDTCMHLTCTNMSGEMIRTALKKAYDTGCRNV 108
                 444899********************************************************************************************* PP

                 EEE--S--TT-GGC---S----SHHHHHHHHHHHHCGGSEEEEEE-TT--TT-S-HHHHHHHHHHHHHCT--EEEEEE-S-HHHHHHHHHHHHHCT-SS CS
       MTHFR 103 lALrGDppkdedkweekeeefkyaldLvrlireeygdlfdigvaaYPevhpeaksleadlkylkeKvdaGAdfiitQlffdvdkflkfveqvreagidi 201
                 lALrGDppk+e +w++ e++f+ya+dLvr+i++ ygd+++igva+YPe+++  +++++++++lkeKvdaGA fi+tQ+f+d+d+f+++v+++re+gi++
  EPX74699.1 109 LALRGDPPKNETEWTQAEGGFRYAADLVRYIKKTYGDEICIGVAGYPEGYSPGDDIDRSISHLKEKVDAGASFIVTQMFYDADNFIEWVKKCRERGISV 207
                 ***********99************************************************************************************** PP

                 -EEEEE---SSHHHHHHHHHHHT----HHHHCCCTCHCT-HHHHHHHHHHHHHHHHHHHHHCT--EEEEE-TT--HHHHHHHHHCT CS
       MTHFR 202 piipgimpiksykslkrlaklskvkiPqelldrleeikdddeavkkigielavemvkkllaegvkglHlytlnkekaileileqlg 287
                 pi+pgimpi++++s+ r+ak+s+vkiPq+++d+l ++kd+d+ +++ g+el+v++++kl+++g+++lH+yt+n+eka+++i+e+lg
  EPX74699.1 208 PIFPGIMPIQAWDSFIRRAKWSGVKIPQHFMDALLPVKDNDDDIRERGAELMVQFCRKLIDNGITRLHFYTMNLEKAVKMIIERLG 293
                 ***********************************************************************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (609 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       515  (0.0287244); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.28s 00:00:00.89 Elapsed: 00:00:00.45
# Mc/sec: 4042.67
//
Query:       EPX74700.1  [L=312]
Description: rRNA methyltransferase Rrp8 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.2e-89  297.2   0.0      1e-88  296.9   0.0    1.1  1  Methyltransf_8   Hypothetical methyltransferase
    6.5e-08   33.1   0.0    4.3e-07   30.5   0.0    2.4  1  Methyltransf_11  Methyltransferase domain
    3.5e-07   30.8   0.1    4.2e-05   24.2   0.0    2.8  2  Methyltransf_25  Methyltransferase domain
    0.00015   21.6   0.0      0.058   13.2   0.0    2.6  1  Methyltransf_31  Methyltransferase domain
    0.00042   19.7   0.0      0.022   14.1   0.0    2.2  2  Ubie_methyltran  ubiE/COQ5 methyltransferase family
  ------ inclusion threshold ------
      0.036   13.6   0.0       0.64    9.5   0.0    2.2  2  MTS              Methyltransferase small domain
       0.16   12.7   1.9          1   10.2   0.0    2.9  2  Methyltransf_12  Methyltransferase domain
       0.19   11.7   5.7       0.19   11.7   0.0    2.2  2  Methyltransf_32  Methyltransferase domain
       0.74    9.0   3.8       0.92    8.7   3.8    1.2  1  Zip              ZIP Zinc transporter
        2.8    6.6  10.5        3.7    6.2  10.5    1.1  1  Presenilin       Presenilin


Domain annotation for each model (and alignments):
>> Methyltransf_8  Hypothetical methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  296.9   0.0   5.6e-92     1e-88       1     219 []      85     312 .]      85     312 .] 0.96

  Alignments for each domain:
  == domain 1  score: 296.9 bits;  conditional E-value: 5.6e-92
                     XXXXXX-HHHHHHHHHHHHHHHHHS-HHHHHHHHHH-HHHHHHHHHHHHHHHCTSSS-HHHHHHHHHC....TS-TTS-EEEES-TT-HHH..HH CS
  Methyltransf_8   1 dleakikkrldgarfrflneklytgesskavdlfkedpeafdlyhkgfrsqvkkWPenPldviirklk....kkkdnlvvadlGcGeakia..ea 89 
                     +l++k+k +ldga+fr++ne+lyt++s+ av+lf++ p++fd+yh+gfr+q+++WPenP+dv+ir lk    kkk +++v+dlGcGeakia  ++
      EPX74700.1  85 SLQQKMKGKLDGAKFRWINEQLYTTQSEDAVKLFRDSPDMFDVYHAGFRHQIENWPENPVDVFIRFLKerydKKKRSVSVVDLGCGEAKIAstFE 179
                     589*****************************************************************999889999**************5555 PP

                     --S-..EEEEESS-SSTTEEES-TTS-S--TT-EEEEEEES---SS-HHHHHHHHHHHEEE.EEEEEEEEEGGG-S..-HHHHHHHHHCTTEEEE CS
  Methyltransf_8  90 vrekekvrsfdlvavnervvacdlakvPledesvdvavfclslmgtnladflkeanrvlkv.GGllkvaevksrfe..svklfaraltklGfevk 181
                      +++  vrsfdlv+ n  ++a d++++Pled++vdva+fclslmgtn+++fl+ea+rvlk+  G l+vae+ksrf+  s+k+fa++l+k+Gfe +
      EPX74700.1 180 ASKHIMVRSFDLVSANRFIEAADISNLPLEDGTVDVAIFCLSLMGTNWQSFLREAYRVLKPqTGQLWVAEIKSRFSdkSGKVFAEELPKMGFENT 274
                     6777789*****************************************************637************98899*************** PP

                     EEE--STTEEEEEEEE-SSS-TT---GG--------XX CS
  Methyltransf_8 182 skdlsnkqfvlfefkkvekkgkkrelglklkpclykkr 219
                     s  l nk+f+lfef k ++ ++ ++l+++l++c+yk+r
      EPX74700.1 275 SLALGNKMFTLFEFVKKPRSQEPQSLPPILSACIYKRR 312
                     *************************************9 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.5   0.0   2.4e-10   4.3e-07      47      91 ..     198     241 ..     144     246 .. 0.73

  Alignments for each domain:
  == domain 1  score: 30.5 bits;  conditional E-value: 2.4e-10
                      ETTEECCCTSS-TT-EEEEEEES-CCC-CCHHHHHHHHHHHEEEE CS
  Methyltransf_11  47 fvvadaeklpfednsfDlvvssevlhhvedpekalkeiaRvLkpg 91 
                      +  ad+++lp+ed+++D+ +   +l+   +++++l+e++RvLkp 
       EPX74700.1 198 IEAADISNLPLEDGTVDVAIFCLSLMGT-NWQSFLREAYRVLKPQ 241
                      3689***********************9.6*************95 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       3.6   6.4e+03      60      70 ..     120     130 ..      79     152 .. 0.54
   2 !   24.2   0.0   2.3e-08   4.2e-05      50      96 ..     198     241 ..     164     241 .. 0.69

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 3.6
                      SSTTTEEEEEE CS
  Methyltransf_25  60 fedgsfDlvvs 70 
                         + fD+ ++
       EPX74700.1 120 DSPDMFDVYHA 130
                      23334554444 PP

  == domain 2  score: 24.2 bits;  conditional E-value: 2.3e-08
                      EEESBCCGBSSSTTTEEEEEEESTGGGSSHHHHHHHHHHHHHHEEEE CS
  Methyltransf_25  50 fvqgdaedlpfedgsfDlvvssgalhhlsdedlekalkeiarvLkpg 96 
                      ++ +d+++lp+edg++D+ + +  l+++   +++ +l+e++rvLkp+
       EPX74700.1 198 IEAADISNLPLEDGTVDVAIFC--LSLMG-TNWQSFLREAYRVLKPQ 241
                      4679**************9995..55554.579************95 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.0   3.3e-05     0.058      58     113 ..     198     251 ..     158     284 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 3.3e-05
  Methyltransf_31  58 FeqgdieeleklledekfDlilsnevlnaladpdkileeiervlkpg.gilliedpr 113
                       e++di +l+  led ++D+ +  ++    ++ +++l+e+ rvlkp+ g l +++++
       EPX74700.1 198 IEAADISNLP--LEDGTVDVAIF-CLSLMGTNWQSFLREAYRVLKPQtGQLWVAEIK 251
                      46899999**..99******776.555678999************982445555555 PP

>> Ubie_methyltran  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.026        47      40      67 ..     153     180 ..     145     195 .. 0.74
   2 !   14.1   0.0   1.2e-05     0.022     105     154 ..     201     250 ..     192     270 .. 0.82

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.026
                      HHH--S--TTEEEEES-TT-HHHHHHHH CS
  Ubie_methyltran  40 eklvavkrgakvlDvagGtgDlafklsd 67 
                      e+ + +kr+ +v+D+ +G + +a ++  
       EPX74700.1 153 ERYDKKKRSVSVVDLGCGEAKIASTFEA 180
                      4567789999**********99866543 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 1.2e-05
                      --TTT-TTS-T-EEEEEEES-GGG-S-HHHHHHHHHHHEEE.EEEEEEEEE CS
  Ubie_methyltran 105 anaeeLpfeddsfDvvtvsfGlrnvtDklkaLkeayrvlkp.GGrlvvlef 154
                      a+  +Lp ed++ Dv      l   t+ +  L+eayrvlkp  G+l v e+
       EPX74700.1 201 ADISNLPLEDGTVDVAIFCLSLMG-TNWQSFLREAYRVLKPqTGQLWVAEI 250
                      45578**********999998876.67999**********95699999886 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.0   0.00036      0.64      16      57 ..     144     185 ..     132     223 .. 0.71
   2 ?    1.6   0.0     0.099   1.8e+02     118     137 ..     227     247 ..     218     264 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00036
                 --HHHHHHHHHCHCC.TCSEEEEET-TTSHHHHHHHHHTTC.E CS
         MTS  16 lDkGsklLletlpke.lsgkvlDlGcGaGvlgaalakespeae 57 
                 +D   ++L e  +k+ +s +v+DlGcG   ++ ++ + s+++ 
  EPX74700.1 144 VDVFIRFLKERYDKKkRSVSVVDLGCGEAKIASTFEA-SKHIM 185
                 55666667777777667778********999988765.33333 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.099
                 HHHHHHHHHHHEEE.EEEEEE CS
         MTS 118 aeeliaeAkeaLke.gGeLli 137
                 ++ +++eA ++Lk+ +G+L++
  EPX74700.1 227 WQSFLREAYRVLKPqTGQLWV 247
                 789*********973699997 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.4       2.5   4.5e+03      52      52 ..      64      64 ..      22     130 .. 0.65
   2 ?   10.2   0.0   0.00056         1      57      96 ..     202     241 ..     144     245 .. 0.73

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 2.5
  Methyltransf_12 52 e 52
                     e
       EPX74700.1 64 E 64
                     1 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00056
  Methyltransf_12  57 dlldldgg.ssfDlvvasnvlhhlkdirevldnirklLkpg 96 
                      d+++l+ + +++D+ + +  l    +++++l++++++Lkp 
       EPX74700.1 202 DISNLPLEdGTVDVAIFCLSLMG-TNWQSFLREAYRVLKPQ 241
                      22222222558888776666666.5**************94 PP

>> Methyltransf_32  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   6.7       3.9     7e+03      80     104 ..      33      64 ..      13      93 .. 0.39
   2 ?   11.7   0.0   0.00011      0.19       9      59 ..     147     191 ..     133     203 .. 0.75

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 3.9
  Methyltransf_32  80 krlsfaelsieeatssktltkkve.........a 104
                      +++ +++ s ++++s   +++k+e         +
       EPX74700.1  33 SETPKNKESKAQQSS--IKKQKQEgngkekpvtE 64 
                      111111111111111..11111112233333321 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 0.00011
  Methyltransf_32   9 laelvakllkelakesgaltvvDvGaGkgYLsfvlalkekeyklkvvgida 59 
                      +++++++   +++k++++++vvD+G+G++  +++ +     +++ v ++d+
       EPX74700.1 147 FIRFLKE---RYDKKKRSVSVVDLGCGEAKIASTFEA---SKHIMVRSFDL 191
                      4444444...4567999************99999998...66777777776 PP

>> Zip  ZIP Zinc transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   3.8   0.00051      0.92     106     171 ..      15      80 ..       9     173 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00051
         Zip 106 hkektpkkasssssesaakksvsndkveeseekedhvaeadtdadskeelrngkqeksesekeqas 171
                 ++e+ ++k+++s+se+a++++ +n++++ ++ + +++++++  ++++ ++ ++++ +++++k +++
  EPX74700.1  15 RQEPKENKKRKSQSEKAKSETPKNKESKAQQSSIKKQKQEGNGKEKPVTENKQSSAQQGDKKLANE 80 
                 456777788888888888888888888777777666666666666666666665555555554433 PP

>> Presenilin  Presenilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2  10.5    0.0021       3.7     235     310 ..      19      85 ..       4     135 .. 0.35

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0021
  Presenilin 235 seeeeeaekkkeeasesskeeeseeesseksaqsseseeeseeesseaessaeesseekeseessesseeeeeeee 310
                 +e++++++++++++se+ k++es+ ++s+     +++++e + +++++++++++s+++      +++ ++e++ ++
  EPX74700.1  19 KENKKRKSQSEKAKSETPKNKESKAQQSS----IKKQKQEGNGKEKPVTENKQSSAQQ-----GDKKLANENSLTS 85 
                 11111111111111111111111111111....1111111111111111111111111.....1111111111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (312 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2438  (0.135981); expected 358.6 (0.02)
Passed bias filter:                      912  (0.0508673); expected 358.6 (0.02)
Passed Vit filter:                       204  (0.0113782); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.71u 0.34s 00:00:01.05 Elapsed: 00:00:00.47
# Mc/sec: 2006.18
//
Query:       EPX74701.1  [L=328]
Description: UBA domain-containing protein Mud1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.1e-60  201.0   0.1      6e-60  200.5   0.1    1.2  1  Asp_protease     Aspartyl protease
    4.4e-22   78.4   0.0    8.9e-22   77.5   0.0    1.5  1  gag-asp_proteas  gag-polyprotein putative aspartyl protease
    4.9e-11   43.1   0.0    1.3e-10   41.8   0.0    1.7  1  Asp_protease_2   Aspartyl protease
    1.5e-05   24.8   0.0    2.5e-05   24.1   0.0    1.4  1  UBA              UBA/TS-N domain
    0.00021   21.1   0.0    0.00037   20.3   0.0    1.5  1  RVP_2            Retroviral aspartyl protease
    0.00077   19.7   0.0     0.0023   18.2   0.0    1.8  1  RVP              Retroviral aspartyl protease
  ------ inclusion threshold ------
        0.2   11.2   0.0       0.35   10.4   0.0    1.4  1  Peptidase_A2B    Ty3 transposon peptidase


Domain annotation for each model (and alignments):
>> Asp_protease  Aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  200.5   0.1   2.3e-63     6e-60       1     124 []      89     212 ..      89     212 .. 0.99

  Alignments for each domain:
  == domain 1  score: 200.5 bits;  conditional E-value: 2.3e-63
  Asp_protease   1 qeaveenlekalehtPeafvkvtmlyinvevngvkvkafvdsGaqksilskkcaercglmrlldtrfkgiakGvGtkkilGrvhsaevklgdlflpv 97 
                   q ++ en+++a+e++Pe+f++v+ml++nve+ng+kvkafvdsGaq++ils++ca rcgl+rlldtrf+g+akGvG++kilG vhsa +k+g+l+lp+
    EPX74701.1  89 QSNIAENMQSAIENHPEVFGQVYMLFVNVEINGHKVKAFVDSGAQATILSADCASRCGLTRLLDTRFSGVAKGVGMAKILGSVHSAPLKIGNLYLPC 185
                   579********************************************************************************************** PP

  Asp_protease  98 alsvledkevdlllGldllkrhqviid 124
                   +++v+e+++vd+llGld+l+r+q++id
    EPX74701.1 186 RFTVIEGRDVDMLLGLDMLRRYQACID 212
                   **************************8 PP

>> gag-asp_proteas  gag-polyprotein putative aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.5   0.0   3.5e-25   8.9e-22       1      92 []     115     206 ..     115     206 .. 0.93

  Alignments for each domain:
  == domain 1  score: 77.5 bits;  conditional E-value: 3.5e-25
                      EEEEETTEEEEEEEETT-SS-EEEHHHHHHTTGGGGEB..TT--EE-TTST.T-EEEEEEEEEE.EETTEEEEEEEEEESSSSEEEEHHHHHH CS
  gag-asp_proteas   1 vkvkingkpvkflvDTGAsstiiseelaerlglsrkedkgkvevktangev.eakrvrldsvkiggielrnvsavvlegelddlLLGldfLkr 92 
                      v+v+ing++vk++vD+GA+ ti+s+++a r+gl+r+ d++ + v+++ g +   + v+ + +kig++ l  ++++v+eg   d+LLGld+L+r
       EPX74701.1 115 VNVEINGHKVKAFVDSGAQATILSADCASRCGLTRLLDTRFSGVAKGVGMAkILGSVHSAPLKIGNLYLP-CRFTVIEGRDVDMLLGLDMLRR 206
                      78***********************************98888888888877345899************8.9*******************97 PP

>> Asp_protease_2  Aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.8   0.0     5e-14   1.3e-10       1      89 [.     115     202 ..     115     203 .. 0.82

  Alignments for each domain:
  == domain 1  score: 41.8 bits;  conditional E-value: 5e-14
  Asp_protease_2   1 vpvtinGkpvrfllDTGasttlispelaeklglkvres.eltvrvsgaggevkarlvrldslklggltlknvpalvldlgeeidglLGmd 89 
                     v+v+inG++v++++D+Ga++t++s + a ++gl++  + ++  +++g+g ++    v+   lk+g+l l   +++v++ g+ +d+lLG+d
      EPX74701.1 115 VNVEINGHKVKAFVDSGAQATILSADCASRCGLTRLLDtRFSGVAKGVGMAKILGSVHSAPLKIGNLYL-PCRFTVIE-GRDVDMLLGLD 202
                     789******************************8865404445555555555556666667******99.59******.*********99 PP

>> UBA  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.0   9.6e-09   2.5e-05       3      37 .]     293     327 ..     292     327 .. 0.97

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 9.6e-09
                 HHHHHHHHHTTS-HHHHHHHHHHTTTSHHHHHHHH CS
         UBA   3 eeaiqrLveMGFdreevveALratgnNeErAveyL 37 
                 e++i +L +MGFd+ e+ +AL a++++++ A+ +L
  EPX74701.1 293 ESKIGQLISMGFDPLEAAQALDAANGDVDVAASFL 327
                 789*****************************998 PP

>> RVP_2  Retroviral aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   1.4e-07   0.00037      25     126 ..     116     216 ..      86     224 .. 0.85

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 1.4e-07
       RVP_2  25 tflvnsipatvLfdsGasHsFiskafvsklklkveaLstpll.ietPvgssvtakeicksveieiqgiefladlilLdlkdlDviLgmdWLsknkanid 122
                 ++ +n+   +   dsGa    +s  ++s+ +l+   L+t++  +   vg   +     +s +++i +  ++    +++ +d+D++Lg+d L +++a id
  EPX74701.1 116 NVEINGHKVKAFVDSGAQATILSADCASRCGLT-RLLDTRFSgVAKGVGMAKI-LGSVHSAPLKIGNLYLPCRFTVIEGRDVDMLLGLDMLRRYQACID 212
                 567899999999*******************96.5799998635555444433.4556899************************************** PP

       RVP_2 123 caek 126
                   ++
  EPX74701.1 213 LENN 216
                 9876 PP

>> RVP  Retroviral aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   8.9e-07    0.0023       7      54 ..     115     162 ..     112     212 .. 0.62

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 8.9e-07
                 EEEEETTEEEEEEE-TTBSSEEEES---SCE....EEEEEEEETTEEE CS
         RVP   7 lkvkiggkyieallDtGAdatviseedwPenwpvkkaetllqGiggat 54 
                 ++v i+g++++a +D+GA+at++s          +  +t + G+ ++ 
  EPX74701.1 115 VNVEINGHKVKAFVDSGAQATILSADCASRCGLTRLLDTRFSGVAKGV 162
                 79*********************9876655544466666666655555 PP

>> Peptidase_A2B  Ty3 transposon peptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00014      0.35      39     132 ..     117     210 ..     113     240 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00014
  Peptidase_A2B  39 ikikntkvktlfdsgsptsfirrdivellkleiyetpplrfrgfvatk..savtseavtldlkvddlqitlaayvldkmdyqllignpilrrypkl 132
                    + i+  kvk++ dsg+ ++++  d      l        rf g       + +     +  lk+ +l +     v++  d ++l+g  +lrry   
     EPX74701.1 117 VEINGHKVKAFVDSGAQATILSADCASRCGLT--RLLDTRFSGVAKGVgmAKILGSVHSAPLKIGNLYLPCRFTVIEGRDVDMLLGLDMLRRYQAC 210
                    678999******************99877664..344458888765431134455566789********************************765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       656  (0.0365888); expected 358.6 (0.02)
Passed bias filter:                      588  (0.032796); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 2227.38
//
Query:       EPX74702.1  [L=454]
Description: dolichyl-phosphate-glucose-glycolipid alpha- glucosyltransferase Alg10 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.4e-111  373.6  27.8   1.6e-111  373.4  27.8    1.1  1  DIE2_ALG10  DIE2/ALG10 family
  ------ inclusion threshold ------
        1.8    9.0   8.7        0.9    9.9   0.7    3.4  4  DUF1011     Protein of unknown function (DUF1011)


Domain annotation for each model (and alignments):
>> DIE2_ALG10  DIE2/ALG10 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  373.4  27.8  1.8e-115  1.6e-111       4     396 .]      43     407 ..      40     407 .. 0.91

  Alignments for each domain:
  == domain 1  score: 373.4 bits;  conditional E-value: 1.8e-115
  DIE2_ALG10   4 pylDEiFHvpQaqkYckgkfkeWdpkiTTpPGLYllsvlllkllklelslselcslavlRlvnllllllllplllrrllkkkkkeskekkavlsalnla 102
                 py+DEiFHv+Qaq+Yc+++++ Wdp iTTpPGLYlls++l+ +l         csl +lR++n+ l ++ +p++l ++ k+ +++     a    l+l+
  EPX74702.1  43 PYMDEIFHVSQAQRYCNQDWR-WDPAITTPPGLYLLSYILKPIL--------GCSLFYLRFLNFALGVIGMPVILFDISKQLNSK-----ARGFPLVLS 127
                 9*******************9.*******************999........8************************97766554.....56789**** PP

  DIE2_ALG10 103 lfPllfffsfLYYTDvlStllvllayllalkkkkklsallglvsllfRQTNivWvvfvaglevvktleeakkkkkkskkeekslkeledllklllslls 201
                 ++P+l+f s LYYTD++St++ llay lal++++ ls++++++sl+fRQTNivWv +++ + v + l+  ++k ++            ++++lll+++s
  EPX74702.1 128 SLPPLWFSSLLYYTDTASTVITLLAYDLALRNAAILSSVFCFFSLFFRQTNIVWVGYIIYTLVSNDLSFYNPKLSEA-----------TFVDLLLTATS 215
                 *************************************************************9999998888777753...........34555555555 PP

  DIE2_ALG10 202 slkkllkkllkilkkllpyllvlvlFaaFvvwNggivlGdksnHeatlhlpQllYfllfiaffslplllskllklkellkallklsllsllltllllll 300
                  + ++lk+l +i kk++p+ +v+++ + F+++NggivlGdksnH++++hl+Q+ Yf++f+++fs+p +ls+ll  +e+ k+ + ++   + +tl+ll  
  EPX74702.1 216 LVGSILKNLRRIWKKVIPFSFVIAFSLGFLMFNGGIVLGDKSNHTPVIHLSQINYFFVFFFIFSFPSCLSSLL-RREFWKTNILFHK-LTRTTLVLLPY 312
                 555669999************************************************************9775.3344444333333.33358999*** PP

  DIE2_ALG10 301 illivkkftivHpflLADNRHYtFYiwrrllkrhplikyllvpvYllslwlvlealaksksvllvlalllatllslvpapLlEpRYfiiPyvllrl 396
                 ++li+k++ti+Hpf+LADNRHY+FY+++r ++r++++kyl +pvY l+  l+++ ++ + svl +++++latll+lvpapL+E+RYfi+P++++r+
  EPX74702.1 313 LFLIIKYNTIMHPFILADNRHYVFYVFNR-FRRYWWLKYLGAPVYALCYSLFIKDVSPHISVLDFTVMTLATLLTLVPAPLVEFRYFILPFLFWRM 407
                 *****************************.9***************************************************************96 PP

>> DUF1011  Protein of unknown function (DUF1011)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0     0.022   1.9e+02      25      42 ..      36      53 ..      20      57 .. 0.85
   2 ?    9.9   0.7    0.0001       0.9      36      73 ..     151     188 ..     144     198 .. 0.89
   3 ?   -3.5   0.0       1.5   1.4e+04      68      77 ..     373     382 ..     353     393 .. 0.47
   4 ?   -1.9   0.5      0.48   4.3e+03      57      79 ..     407     429 ..     376     441 .. 0.56

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.022
     DUF1011 25 vqsYsclpYGnkaYhlsv 42
                v+ + c+pY  +++h+s 
  EPX74702.1 36 VNRFVCIPYMDEIFHVSQ 53
                67899**********985 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.0001
     DUF1011  36 kaYhlsvtlssianPlacflamflpvrslkvlgvltll 73 
                  aY l++  ++i +++ cf+++f+++++++++g+++ +
  EPX74702.1 151 LAYDLALRNAAILSSVFCFFSLFFRQTNIVWVGYIIYT 188
                 59*****************************9988765 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 1.5
     DUF1011  68 gvltllglll 77 
                 ++ +++++l+
  EPX74702.1 373 VLDFTVMTLA 382
                 2222333332 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 0.48
     DUF1011  57 mflpvrslkvlgvltllglllsa 79 
                 m +p +s +++ + +++ +++ a
  EPX74702.1 407 MKVPWKSKNFMLTEFIFHMAVNA 429
                 44444444444444333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (454 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       538  (0.0300073); expected 358.6 (0.02)
Passed bias filter:                      223  (0.0124379); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.45
# Mc/sec: 3000.52
//
Query:       EPX74703.1  [L=363]
Description: para-hydroxybenzoate-polyprenyltransferaseCoq2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.2e-49  168.9   7.5    1.6e-49  168.5   7.5    1.1  1  UbiA         UbiA prenyltransferase family
  ------ inclusion threshold ------
       0.12   11.5   0.0       0.21   10.8   0.0    1.3  1  Melibiase_2  Alpha galactosidase A


Domain annotation for each model (and alignments):
>> UbiA  UbiA prenyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  168.5   7.5   1.8e-53   1.6e-49       3     250 ..      94     341 ..      88     343 .. 0.90

  Alignments for each domain:
  == domain 1  score: 168.5 bits;  conditional E-value: 1.8e-53
        UbiA   3 ipalvg.lalaaggspdlllllllllgtllaaaaanalNdyfDreiDadmertpnRPlvsGrispkealifaivllilgllllalllnpltallgllal 100
                 +++l+g + + ++    +++l+l+ +g +l+++a++++Nd++Dr+ Da++er + RPl++ ++s++ea+ +  v l ++l++l l+lnp+t+ lg+++l
  EPX74703.1  94 WSILMGaYSVNSNLFDVFKILALFGAGSFLMRSAGCVVNDLWDRNLDAKVERSKSRPLANKLVSVREAVSVLGVQLTASLGIL-LQLNPYTIKLGIASL 191
                 5556664555544444459999999**********************************************************.*************** PP

        UbiA 101 llyvvYtglrlKrrtllgtvvggiafglppllgwaa.vtgsl..sllalllalavflltwaialandlrdregDrkagiktlpvvlGrkaarillalll 196
                 l +++Y+   +Kr+t++++vv+g++fg ++++gw a v++ l  +  ++ l+l +  +++ ++++++++d+++D ka+i+++++++G+++   l  l+l
  EPX74703.1 192 LPVCIYP--AMKRVTYYPQVVLGLTFGYGAVMGWPAlVGEALmnWSVVAPLYLSTVSWIVLYDTIYAHQDKRDDVKANIYSMALRYGDNTKPLLTGLAL 288
                 *******..***************************77777799999999999999************************************9744444 PP

        UbiA 197 avlllallllllalllllylllalllaalallraarlvrrrdakkaakfflfls 250
                 + l+++ ++  + + ++l++ ++++  a+ ++  ++ v+ +++k++ ++f + +
  EPX74703.1 289 FQLSMLTTAGIFNNQGPLFYTIGVAGTAYRVFSMIYKVDLNSPKDCFSWF-KTN 341
                 444444678999999********************************999.655 PP

>> Melibiase_2  Alpha galactosidase A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   2.3e-05      0.21     135     181 ..      63     110 ..      44     119 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 2.3e-05
                  SSSHHHHHHHHHHHHHHHHHTTS--EEE.E-HHHHH.TTTS---HHHH CS
  Melibiase_2 135 ysnleelaegykelslalnktgrsivys.cewplyavvkkkkvdytei 181
                  +s+l++  + y +ls+a+n tg  ++ys c w + +++ + + +  ++
   EPX74703.1  63 FSQLSQRINAYAHLSRAFNPTGTFLLYSpCTWSILMGAYSVNSNLFDV 110
                  577888899******************99******9998888877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (363 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       468  (0.026103); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2669.82
//
Query:       EPX74704.1  [L=1016]
Description: translation initiation factor IF2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      3e-34  118.3   2.8    3.6e-34  118.0   0.0    2.6  3  GTP_EFTU     Elongation factor Tu GTP binding domain
    2.9e-18   65.9   0.0    7.4e-18   64.6   0.0    1.7  1  IF-2         Translation-initiation factor 2
    4.3e-14   52.7   5.1    2.8e-08   34.0   0.1    3.3  2  GTP_EFTU_D2  Elongation factor Tu domain 2
      2e-08   34.0   0.6    6.5e-08   32.4   0.6    1.9  1  GTP_EFTU_D4  Elongation factor Tu domain 4
    1.7e-07   31.3   0.4    2.5e-06   27.5   0.0    3.2  3  MMR_HSR1     50S ribosome-binding GTPase
    0.00025   21.3   0.0    0.00086   19.5   0.0    2.0  1  Roc          Ras of Complex, Roc, domain of DAPkinase
  ------ inclusion threshold ------
      0.019   14.8   0.0      0.019   14.8   0.0    3.2  4  ATP_bind_1   Conserved hypothetical ATP binding protein
          4    7.7   7.4        0.6   10.4   0.2    2.8  2  AAA_22       AAA domain


Domain annotation for each model (and alignments):
>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   1.9       3.7   8.2e+03      41      49 ..     247     255 ..     205     297 .. 0.57
   2 !  118.0   0.0   1.6e-37   3.6e-34       5     192 ..     422     631 ..     418     633 .. 0.86
   3 ?   -2.8   0.0       1.7   3.9e+03      86     108 ..     884     906 ..     882     911 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 3.7
                 STHCHSHHH CS
    GTP_EFTU  41 rvlDtlkeE 49 
                 +  D+ k+E
  EPX74704.1 247 KEKDRKKKE 255
                 222222222 PP

  == domain 2  score: 118.0 bits;  conditional E-value: 1.6e-37
                 EEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHHHHHSTHCHSHHHHHHTSCSSCEEE.EEETTCSSEEEEEEEESSSGGGHHHHHHHHHT-SEEEEEEE CS
    GTP_EFTU   5 nigiighvDhGKtTLtdrLlyktgaiskkgekaeeervlDtlkeErergiTiksaai.sleketkkylinliDtPGHvdFskevirglrvlDgavlvvd 102
                  ++i+ghvD+GKt L+d+L  ++ +  ++g  ++ +      + E  ++ T  ++   +le   +   + +iDtPGH++F++  +rg++ +++a+lv+d
  EPX74704.1 422 ICCILGHVDTGKTKLLDNLRRSHVQEGEAGGITQ-QIGATYFPIESIKQKTAAVNKKgKLE--FNIPGLLIIDTPGHESFTNLRSRGTSLCNIAILVID 517
                 69******************99999888777665.67789999999999998886651555..99********************************** PP

                 TTTBSTHHHHHHHHHHHHTTTEEEEEEESCGST...........HHHHHHHHHHHHHHHHHH.............HHHHHHHHHTTT..........TT CS
    GTP_EFTU 103 aveGvepqteevlrlalkegvpiivfiNKmDrl...........kaelkeiveevkqklsrk.............eeklekygekge..........ke 167
                 +++G epqt e +rl++++++p++v++NK+Drl           +++l++++++++++++++             +                     + 
  EPX74704.1 518 IMHGLEPQTMESIRLLRDNKTPFVVALNKVDRLygwhsikengfQDSLSKQKKAIQREFRDRvdsiilqlneqglN----------AalyfenkkmgSY 606
                 ******************************************99999************77777776666654442..........034444445669* PP

                 EEEEEEBTTTTBTHHHHHHHHHHHS CS
    GTP_EFTU 168 vpvvfgSalkgegvktllealvell 192
                 v++v++Sa +gegv +l+  lv l+
  EPX74704.1 607 VSLVPTSAQSGEGVPDLVALLVALT 631
                 *****************99998765 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 1.7
                 HHHHHHHT-SEEEEEEETTTBST CS
    GTP_EFTU  86 evirglrvlDgavlvvdaveGve 108
                 ++i++ ++ D  +l vd+veGv 
  EPX74704.1 884 NTIAAFNKRDPIILGVDVVEGVL 906
                 78899999999999999999985 PP

>> IF-2  Translation-initiation factor 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.6   0.0   3.3e-21   7.4e-18      13     104 ..     766     858 ..     756     859 .. 0.89

  Alignments for each domain:
  == domain 1  score: 64.6 bits;  conditional E-value: 3.3e-21
                 SCCEEEEEESSHHHHHHHHHHHHCTT.SSTEEEECEEEESSB-HHHHHHHHH....ST..EEEEEESSSCTHHHHHCCCCCTSEEEEESSHHHHHHHH CS
        IF-2  13 kelnviikaDvqGsleAlkeaLekleseevkvkvihsgvGaitesDvelasa....sn..aiiigFnvkvskkakklaekegvkirlynvIYkliddv 104
                 + ++v ++a++ GsleAl e+L+++     k++v ++++G++ ++D++++++    ++  a++++F+vkv+++a+ la++ g+k++++nvIY+l+d +
  EPX74704.1 766 SGVGVSVQASTLGSLEALLEFLRQM-----KIPVASVNIGPVYKKDIMKCATmvekAKeyALLLCFDVKVDHDAELLADQLGIKVFSANVIYHLFDAF 858
                 568999******************9.....7******************98877551157***********************************976 PP

>> GTP_EFTU_D2  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.0   0.1   1.2e-11   2.8e-08       1      72 [.     659     735 ..     659     737 .. 0.93
   2 !   18.3   1.4     1e-06    0.0023       5      55 ..     898     951 ..     896     960 .. 0.86

  Alignments for each domain:
  == domain 1  score: 34.0 bits;  conditional E-value: 1.2e-11
                  EEEEEEEEEESEEETTEEEEEECTCTTSEEEEEEEEEEEEETEEESEE..........ETTSEEEEEEEESSCCSGSSTTCE CS
  GTP_EFTU_D2   1 GtvalgrvysGtlkkGdevrilgndtskkeivtrissletfhededea..........vaganaGvivaikgledaiivGdt 72 
                  G ++++++ +G+l++Gd+++++g++    +i+t++++l+t+ ++++e+          +  a+ Gv++ + +l++a ++G+ 
   EPX74704.1 659 GATIDVILSNGVLREGDRIVLCGMGG---PIITTVRALLTP-QPMKEMrvksayvhhkEIRAAMGVKICANDLDKA-VAGSR 735
                  789********************653...9***********.88*******************************8.99975 PP

  == domain 2  score: 18.3 bits;  conditional E-value: 1e-06
                  EEEEEESEEETTEEEEEEC.TCTTSEE...EEEEEEEEEEETEEESEEETTSEEE CS
  GTP_EFTU_D2   5 lgrvysGtlkkGdevrilg.ndtskke...ivtrissletfhededeavaganaG 55 
                  ++ v++G+l+kG  ++ ++  + ++++   +++r+ sle++h++++ + +g+++G
   EPX74704.1 898 GVDVVEGVLRKGTPIVSVKgAP-GEEPqviELGRVVSLEMNHKPVERVKKGQAGG 951
                  6779*************99665.45559*******************99999887 PP

>> GTP_EFTU_D4  Elongation factor Tu domain 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.4   0.6   2.9e-11   6.5e-08      13      86 .]     889     978 ..     880     978 .. 0.85

  Alignments for each domain:
  == domain 1  score: 32.4 bits;  conditional E-value: 2.9e-11
                  EETCCCEEEEEEEEEEEEETT-EEEETTE.........EEEEEEEEEETTEEESEEETT-E...EEEEEE....SS-.TTTS--TT-EEE CS
  GTP_EFTU_D4  13 frrsdpaivGvevlgGvikpgvklikedGr........evGeilqiqdkgkkleeakaGqe...vaisie....gki.vGrqikegdily 86 
                  f ++dp+i Gv+v++Gv++ g ++++ +G         e+G++++++ ++k +e +k+Gq    va+ +e    ++i  Gr++ e d+ly
   EPX74704.1 889 FNKRDPIILGVDVVEGVLRKGTPIVSVKGApgeepqviELGRVVSLEMNHKPVERVKKGQAgggVAMKLEagggSQIlFGRHVTESDTLY 978
                  8899*********************999964445555579**************99998865559**998555457999*********99 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.5   0.0   1.1e-09   2.5e-06       2     114 .]     423     546 ..     422     546 .. 0.79
   2 ?   -3.4   0.0       4.5     1e+04      30      75 ..     658     713 ..     648     730 .. 0.59
   3 ?   -0.9   0.0      0.77   1.7e+03      75     103 ..     847     871 ..     827     891 .. 0.60

  Alignments for each domain:
  == domain 1  score: 27.5 bits;  conditional E-value: 1.1e-09
                 EEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSE..EEEEEE.ETTEE.................EEEEECGGCSSHHHHHHHHHHHHHHHHC.TSEE CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgekaivsdkpgtTrdi..negrvk.lkgke.................ielvDtpGliegaseekglgkaflalee.adli 79 
                 ++i+G+  +GK+ L+  l +++++ ++  g T++i  +++ ++ +  k+                 + ++DtpG  e      ++++   +  + ++++
  EPX74704.1 423 CCILGHVDTGKTKLLDNLRRSHVQEGEAGGITQQIgaTYFPIEsI--KQktaavnkkgklefnipgLLIIDTPG-HE------SFTNLRSRGTSlCNIA 512
                 689*****************9999999999999995444444431..2235667777778888888********.54......33333333333489** PP

                 EEEEETTTTCSHHHHHHHHHHHHHTTSEEEEEEES CS
    MMR_HSR1  80 llvvdaseeklkpldeeleelleeakkplilvlnk 114
                 +lv+d+  ++l+p+  e  +ll+++k p++++lnk
  EPX74704.1 513 ILVIDIM-HGLEPQTMESIRLLRDNKTPFVVALNK 546
                 *****99.77****99999**999*********98 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 4.5
                 TTSSSSEEEEEEEETT.EEEEEEECGG.CS........SHHHHHHHHHHHHHHHHC CS
    MMR_HSR1  30 pgtTrdinegrvklkg.keielvDtpG.li........egaseekglgkaflalee 75 
                  g+T+d++  +  l++ ++i+l+ + G +i         +  +e +++ a+  ++e
  EPX74704.1 658 LGATIDVILSNGVLREgDRIVLCGMGGpIIttvralltPQPMKEMRVKSAYVHHKE 713
                 57788886666554444888888888842133332222133444466666666655 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.77
                 CTSEEEEEEETT...TTCSHHHHHHHHHHHHH CS
    MMR_HSR1  75 eadlillvvdas...eeklkpldeeleellee 103
                 +a++i +++da    +      ++ + +  +e
  EPX74704.1 847 SANVIYHLFDAFtahQ------NKIMDQK-RE 871
                 3799999999773332......2223222.22 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   3.9e-07   0.00086       3     119 ..     424     548 ..     423     549 .. 0.75

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 3.9e-07
                 EEESSTTSSHHHHHHCHCT-CCC-EE....ETTTTEEEEEEECGGSGGCTTBTTTTCEEEE.....EEEE-SGGCTTTT-HHHHCTSCEEEEEEEGHHH CS
         Roc   3 vlvGdsgvGKtsllkrfvedkfseke....kstigvdfltkevtkikgvendkkvkkvkln.....iWDtaGqerfrslhplylreaalailvydsrss 92 
                 +++G   +GKt+ll+++ +++++e e    ++ ig++++  e  k k+   +kk  k+++n     i Dt G+e f +l++   +  ++ailv+d  + 
  EPX74704.1 424 CILGHVDTGKTKLLDNLRRSHVQEGEaggiTQQIGATYFPIESIKQKTAAVNKKG-KLEFNipgllIIDTPGHESFTNLRSRGTSLCNIAILVIDIMHG 521
                 699****************999987633336889999988776666655554443.466652222279***************************7654 PP

                 HCHHHHHHHHHHHCSSS.-EEEEEE-TT CS
         Roc  93 enlkeWlkelkkvagks.pvilvgnkiD 119
                  +  + +++++  ++++ p+++  nk+D
  EPX74704.1 522 LE-PQTMESIRLLRDNKtPFVVALNKVD 548
                 33.3557888887765428888889999 PP

>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.8       2.4   5.3e+03     176     211 ..      37      72 ..      25      77 .. 0.61
   2 ?   -5.2   4.1         8   1.8e+04     168     168 ..     242     242 ..     178     300 .. 0.56
   3 ?   14.8   0.0   8.4e-06     0.019      66     226 ..     458     604 ..     444     627 .. 0.75
   4 ?   -2.1   0.1       1.2   2.6e+03      16      86 ..     783     841 ..     780     871 .. 0.60

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 2.4
  ATP_bind_1 176 eleffedvealslllekeeekykklaeaiaelleef 211
                 e + +++ve++++  +k+++k k  +++  ++lee 
  EPX74704.1  37 ETDELKEVEDFNASSNKKSKKKKGKKNQEEQALEEE 72 
                 456666777777777777755555555555666655 PP

  == domain 2  score: -5.2 bits;  conditional E-value: 8
  ATP_bind_1 168 l 168
                  
  EPX74704.1 242 A 242
                 1 PP

  == domain 3  score: 14.8 bits;  conditional E-value: 8.4e-06
  ATP_bind_1  66 galvvaleflresldwldeeleke.ed.dyllfDtPGQielfthseslakiveeLesefalvvvyLvDsqrltdptkfisgllsalsamlrlelPhvvv 162
                 ga+ + +e ++++   ++++ + e +   +l++DtPG   + ++++ +         +   +++ ++D     +p +  s     ++ +   ++P+vv+
  EPX74704.1 458 GATYFPIESIKQKTAAVNKKGKLEfNIpGLLIIDTPGHESFTNLRSRGT--------SLCNIAILVIDIMHGLEPQTMES-----IRLLRDNKTPFVVA 543
                 78888899999999889776655544358********999999999999........55567777778777777655444.....577888******** PP

  ATP_bind_1 163 lnkfDllkeklekeleffedvealslllekeeekykklaeaiaelleefalvlrflplssekee 226
                 lnk+D l   +  + + f+  ++ls+ ++  ++ +++   +i   l+e +l+   l+ +++k  
  EPX74704.1 544 LNKVDRLYGWHSIKENGFQ--DSLSKQKKAIQREFRDRVDSIILQLNEQGLN-AALYFENKKMG 604
                 ******9855555555555..5566666666688999999999999998888.55555555544 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 1.2
  ATP_bind_1  16 lseilelrgrsvavvNLDPAaeelpYeaavdirelitledvmedlglgpngalvvaleflresl.dwldeel 86 
                 l e+l++ + +va vN+ P  +          +++++ + + e+    +  al  ++++ +++  + l+++l
  EPX74704.1 783 LLEFLRQMKIPVASVNIGPVYK----------KDIMKCATMVEK---AKEYALLLCFDVKVDHDaELLADQL 841
                 6667777777777777777655..........344444444444...4556777777776666534445554 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.1   2.7         8   1.8e+04      30      81 ..     205     260 ..     198     283 .. 0.51
   2 ?   10.4   0.2   0.00027       0.6       7     117 ..     422     535 ..     418     546 .. 0.62

  Alignments for each domain:
  == domain 1  score: -5.1 bits;  conditional E-value: 8
      AAA_22  30 deeakaeeerpevvfvtlpsstsskdllrellralglelka....erlsseellea 81 
                 +e +++eee++++++ +    ++ k l++e  r+ ++ +++     r+++eel ++
  EPX74704.1 205 EEKKAQEEEERRQIEEEERLAEEEKRLAEEEERQKEEAKEKkkekDRKKKEELKAQ 260
                 44444455556666555555555555555555555555555555533333333333 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00027
      AAA_22   7 ilvvtGesGtGKTtllrrlleqldeeakaee.........erpevvfvtlpsst..sskdllrellralglelkaerlsseellealeqalraraviel 94 
                 i+++ G++ tGKT ll +l++++++e +a            + e ++ + ++ +  +  ++    l +++ ++++   s   l+++ +  ++    i++
  EPX74704.1 422 ICCILGHVDTGKTKLLDNLRRSHVQEGEAGGitqqigatyFPIESIKQKTAAVNkkGKLEFNIPGLLIIDTPGHE---SFTNLRSRGTSLCN----IAI 513
                 78999******************9998888888776666644444432222222123444544444444444444...44444444444433....457 PP

      AAA_22  95 liiDEaqhlrseealeeLrslln 117
                 l+iD ++ l +++ +e +r l +
  EPX74704.1 514 LVIDIMHGL-EPQTMESIRLLRD 535
                 788888888.7777777776666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1016 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3346  (0.186625); expected 358.6 (0.02)
Passed bias filter:                      838  (0.0467399); expected 358.6 (0.02)
Passed Vit filter:                       374  (0.0208601); expected 17.9 (0.001)
Passed Fwd filter:                       131  (0.0073066); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 2.64u 0.42s 00:00:03.06 Elapsed: 00:00:00.69
# Mc/sec: 4455.77
//
Query:       EPX74705.1  [L=1513]
Description: AMP binding enzyme [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.4e-53  182.1   0.0    5.7e-30  104.3   0.0    4.2  3  AMP-binding  AMP-binding enzyme


Domain annotation for each model (and alignments):
>> AMP-binding  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.3   0.0   3.2e-34   5.7e-30      10     414 ..     174     676 ..     167     682 .. 0.74
   2 !   36.0   0.0   1.6e-13   2.9e-09       4      99 ..     892    1007 ..     889    1059 .. 0.75
   3 !   34.7   0.0   4.1e-13   7.3e-09     180     404 ..    1079    1340 ..    1076    1345 .. 0.63

  Alignments for each domain:
  == domain 1  score: 104.3 bits;  conditional E-value: 3.2e-34
                  TSEEEEE....CCSTEEEEHHHHHHHHHHHHHHHH.HTTSSTT-EEEEEESSS..HHHHHHHHHHHHTT-EEEEEETTS-HHHHHHHHHHHTESEEEE CS
  AMP-binding  10 dkvalvd....sgegqtlTYreldervnrlAagLr.slGvkkgdrVaillpns..pewvvallailkaGavvvplnptltaeelayiledseakvlia 100
                  +k+a+v     ++e  + T++   +r++++A+++r + G+ + drVa++++ s  ++++v+l++++ aG+v+vp+n      el  i++ ++ ++ + 
   EPX74705.1 174 KKTAFVIldskGKEFASSTWEKIASRAEKVAQVIRdKSGLFRSDRVALMYRDSeaIDFIVSLFGCFIAGVVAVPVNHFDDYNELTSIFTTTGTRLAL- 270
                  566665567888899********************999************9875589****************************************. PP

                  TCTCCCHHHHHHHHSCC-EECEEEEESCCS-HCCHCCCHCCCCSCTTS-TSCCCS-BTTSEEEEEEE--SSSS-EEEEEEHHHHHHHHHHHH..HHHC CS
  AMP-binding 101 tvdselleklleaaakleavklvivldadellkeeelkeeeeseekaekpeeeeelkpddlayiiYTSGTTGkPKGVmlshrnlvanvaslk..letr 196
                   + +++l++ +++  + ++  +   ++ ++ ++   +++++        + + ++l+  dlayi ++    G+  GV++shr +++++  ++  l+t 
   EPX74705.1 271 -TTDANLKSFQRDLNA-KKLHWPKNVEWWKTNEFGGFHFRK--------KGDLPPLQVPDLAYIEFSRSPLGELHGVVISHRTILHQMNCFAasLSTA 358
                  .555554444444443.233333333322222222222222........2245578999*************************99876666664433 PP

                  ...SCCTT..................T-EEEESS-TTSCHHHHHHHHHHHHTT-EEEE-TTCGCCHHHHHHHHHHHHT-SEEEEEHHHHHHH...HHC CS
  AMP-binding 197 ...fklke..................ddvvlsilplahifglilelllallsGatvvllpkdaaldpklllelieklkvtviagvPrvleal...les 270
                     +   +                     +l++l+l  ++glil++l +++sG t v +p++a + p+l+++l ++++++++ + ++ l+a+     +
   EPX74705.1 359 payD---SdkmdylsmdreyfegvskAGLFLTYLDLRQAIGLILGVLHTVFSGYTTVWCPQSAVFVPGLWANLATRYRANYMLTDYAGLKAIaynY-Q 452
                  3222...13446688999999999866678******************************9999999*************************8542.4 PP

                  CCHH.C....HHHHCCGTT-SE...................................................EEEESS-EBHHHHHHHHHHHTCEEE CS
  AMP-binding 271 galk.a....akkakdlsslrl...................................................vllggeplspellrffralfgeevl 312
                  +++k +    +k+  dls lr+                                                                            
   EPX74705.1 453 NDPKaTlgfsKKQPVDLSTLRMcmvdclnvdcefqeivsdrwlkplgnhnsratlvpllclpehggmvismkdW------------------------ 526
                  444433554433444*******7777777777777777777777777777777777766666666655444431........................ PP

                  EEEEEGGGSSECEE............................................CHCTTTCTSTTS-B...EE-TTEEEEEE-TTTSCBEETTS CS
  AMP-binding 313 egYGlTEttgvvtv............................................lpleedkkklgsvG...kplpgvevkivDeetgepvpdge 363
                               v                                            ++++ +++++ + G    p+ ++ ++ivD+et+ ++ +++
   EPX74705.1 527 -------------VggeefmsprgfqvprtseneiaevlldkealklnevvvlaedekARRQSKHPSTIRLGafwYPFVDATLAIVDPETEVLCIPNV 611
                  .............03333333333333333333333333333333333334444444433333333333445888999******************** PP

                  EEEEEEEETTS-SEBTT-HHHHHHHEEE...............TCCEEEEEEEEEEETTSEEEEEE CS
  AMP-binding 364 eGellvrgpgvmkgYlkkpeataeafds...............egrwlrTGDlgrldedGyleivg 414
                  +Ge++v +p++  g++  p++t+  f +               ++++lrTG lg+++ +G ++++g
   EPX74705.1 612 VGEIWVDSPSLSGGFFALPKQTEAIFHAktyfissdtfepvasNQEFLRTGLLGFVH-KGKIYVLG 676
                  **************************97899999*****9985356***********.9*****98 PP

  == domain 2  score: 36.0 bits;  conditional E-value: 1.6e-13
                   HHHHSTTSEEEEE....CCSTEEEEHHHHHHHHHHHHHHHH.HTTSSTT-EEEEEESSSHHHHHHHHHHHHTT-EEEEEET............... CS
  AMP-binding    4 qaaktpdkvalvd....sgegqtlTYreldervnrlAagLr.slGvkkgdrVaillpnspewvvallailkaGavvvplnp............... 79  
                   +++++ d++a++     + eg+ +T+r +d+rv  + ++L+ ++ +k g +V++++  s ++v al+a++++G++++p+ p               
   EPX74705.1  892 RVKENADDIAYITidgrGREGKNITWRKFDQRVATVIRYLQkKKYLKAGRVVVLMYTHSEDYVYALYACFYLGLIPIPVPPldntrlsedvpaflf 987 
                   788999*****999999999*********************66677*********************************99777655444444444 PP

                   TS-HHHHHHHHHHHTESEEE CS
  AMP-binding   80 tltaeelayiledseakvli 99  
                     ++  ++ +l +sea + i
   EPX74705.1  988 LNKQYYVSAVLLNSEADMAI 1007
                   44444455555555555555 PP

  == domain 3  score: 34.7 bits;  conditional E-value: 4.1e-13
                   EHHHHHHHHHHHHHHHCSCCTTT-EEEESS-TTSCHHHHHHHHHHHHTT-EEEE-TTCGC.CHHHHHHHHHHHHT-SEEEEEHHHHHHHHH.CCCH CS
  AMP-binding  180 shrnlvanvaslkletrfklkeddvvlsilplahifglilelllallsGatvvllpkdaa.ldpklllelieklkvtviagvPrvlealle.sgal 273 
                    h+ l+++++ +k et++ ++++  vl  +     +g+   +l+ ++ G t ++l++ ++  +p ll++ i+k+k+  ++++ + l+++ + ++  
   EPX74705.1 1079 NHETLLSSCQIQK-ETCQ-MTHKRPVLGHVRSMSGIGFLHTCLMGVFLGTTTYMLSPLDFaNNPLLLFHIISKYKIKDTYATFQTLNYVQNmQP-T 1171
                   6888888866654.3333.44444445554444455556999999999************566**************************88443.4 PP

                   HCHHHHCCGTT-SEEEE.....ESS-EBHHHHHHHHHHHTC..EEEEEEEEGGGSSECEE..........................CHCTTTCTST CS
  AMP-binding  274 kaakkakdlsslrlvll.....ggeplspellrffralfge..evlegYGlTEttgvvtv..........................lpleedkkkl 336 
                   k+     +ls l+ +++     + +   +el++ff + +    +++ +Y    ++ v+t                                     
   EPX74705.1 1172 KW----PNLSCLENLMIphdgrVNAFYISELQKFFMKFGLSpyAFSIVYSSCLNSFVTTRsymgatptkycvdlralrhglvqpcdS-------ED 1256
                   42....244546665533222233333344444444433335534444444433333322223333444455556678887544321.......33 PP

                   TS-BEE-......T.TEEEEEE-TTTSCBEETTSEEEEEEEETTS-SEBTT-.HHHHHHHEEE........TCCEEEEEEEEEE CS
  AMP-binding  337 gsvGkpl......p.gvevkivDeetgepvpdgeeGellvrgpgvmkgYlkk.peataeafds........egrwlrTGDlgrl 404 
                   +++  pl      p  ++v+iv+++t e+++ ge Ge++vr+ +++  +++  +     +f++        +g+++rTGDlg+l
   EPX74705.1 1257 KTYALPLldsgmvPiSTQVAIVNPDTRELCRLGEYGEIWVRSSSNAISFFQSsDPVDMMRFNAscdnesigNGQYVRTGDLGFL 1340
                   445544444444455***********************************952333445555456667663355********86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1513 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       458  (0.0255452); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.89u 0.27s 00:00:01.16 Elapsed: 00:00:00.44
# Mc/sec: 10223.67
//
Query:       EPX74706.1  [L=710]
Description: ATP-dependent RNA helicase Ddx27/Drs1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-46  157.6   0.1    4.6e-46  156.8   0.1    1.4  1  DEAD        DEAD/DEAH box helicase
    1.1e-29  103.0   0.2    7.1e-28   97.2   0.1    2.8  2  Helicase_C  Helicase conserved C-terminal domain


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.8   0.1   5.1e-50   4.6e-46       1     176 []     242     412 ..     242     412 .. 0.96

  Alignments for each domain:
  == domain 1  score: 156.8 bits;  conditional E-value: 5.1e-50
                 -HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHS.TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   1 tdiQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyet.kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngv 98 
                 t+iQa++ip +l g+d+++aa TGsGKT+af++p+l++++ + k+ ++ ++l+++PtreL  q+++ ++k+  ++d+  +l++gg + ++q ++l+n++
  EPX74706.1 242 TQIQAKTIPVALLGKDIVGAAITGSGKTAAFIVPILERLLYRpKKIPTSRVLVLVPTRELGIQCHSVATKIAAFTDIVSCLCVGGLSLKQQEQELRNRP 340
                 79**********************************999888899****************************************************** PP

                 SEEEEEHHHHHHHH.HCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHHHHH CS
                 xxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  99 divvgtpgrlddll.stgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkdvkkl 176
                 di+++tpgr++d++ +++ +++++++++V+DEadr+ld+gf d++n+i+n++       +++rq++++SAT++++v++l
  EPX74706.1 341 DIIIATPGRFIDHMrNSQGFTVEHIEIMVMDEADRMLDDGFADELNEIINSC-------PKSRQTMLFSATMTDKVDDL 412
                 ************99777889********************************.......67899*********999875 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0     0.017   1.6e+02      12      89 ..     285     369 ..     273     379 .. 0.70
   2 !   97.2   0.1   7.9e-32   7.1e-28       6     111 .]     454     558 ..     450     558 .. 0.91

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.017
                 HTTTTSEEEEEESSHH...HHHH..HHHHHHHT.TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGG.......GTSSSTSTTESEEE CS
  Helicase_C  12 leeeggkilifvntid...rlek..vklllekk.gikvavlhgelpqnereeileqfnkgesdvLiatdv.......aerGidipkvnlVi 89 
                 ++  ++++l+ v+t++   ++++  +k+    + +i ++ + g l+ +++e+ l++      d++iat         +++G +++ ++ ++
  EPX74706.1 285 KKIPTSRVLVLVPTRElgiQCHSvaTKIA--AFtDIVSCLCVGGLSLKQQEQELRNR----PDIIIATPGrfidhmrNSQGFTVEHIEIMV 369
                 56678899********9887755644444..44689999999999999999988776....357777766666666666666666666555 PP

  == domain 2  score: 97.2 bits;  conditional E-value: 7.9e-32
                 HHHHHHHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHHHHHHH CS
  Helicase_C   6 llellkleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvtsyiqri 104
                 l++l  ++  ++k++if +++  +++++++    ++++a +hg+l+q++r+++le+f++g++++L+atdva+rGidi+++++Vin+++p + + y +r+
  EPX74706.1 454 LVYLC-KTLFHKKTIIFFRSKVFAHRMRIIFGLLSLSAAEIHGSLSQEQRIRALEDFRDGKCNYLLATDVASRGIDIKGIEVVINYEAPSSHEIYLHRV 551
                 55554.67799***********7766688866669**************************************************************** PP

                 TTSSSTT CS
  Helicase_C 105 GRtgRag 111
                 GRt+Rag
  EPX74706.1 552 GRTARAG 558
                 *****97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (710 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1939  (0.108149); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.76u 0.30s 00:00:01.06 Elapsed: 00:00:00.46
# Mc/sec: 4611.80
//
Query:       EPX74707.1  [L=1196]
Description: nucleoporin Nup124 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.6e-07   30.7  14.1    3.6e-07   30.7  14.1   11.3  8  Nup_retrotrp_bd  Retro-transposon transporting motif


Domain annotation for each model (and alignments):
>> Nup_retrotrp_bd  Retro-transposon transporting motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0      0.63   1.1e+04      54      80 ..      77     117 ..      46     120 .. 0.60
   2 ?  -16.9  26.4         1   1.8e+04       7      58 ..     576     642 ..     488     683 .. 0.64
   3 ?   -5.7  13.2         1   1.8e+04       6      67 ..     685     745 ..     671     757 .. 0.62
   4 ?  -18.8  30.5         1   1.8e+04       9       9 ..     852     852 ..     759     929 .. 0.54
   5 ?    2.4   0.6     0.014   2.5e+02      23      35 ..     962     974 ..     943     979 .. 0.70
   6 ?   -1.7  23.1      0.27   4.8e+03       7      71 ..     979    1046 ..     974    1050 .. 0.80
   7 ?  -15.5  35.4         1   1.8e+04       3      65 ..    1074    1129 ..    1015    1133 .. 0.77
   8 !   30.7  14.1     2e-11   3.6e-07      12      86 .]    1117    1195 ..    1116    1196 .] 0.87

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 0.63
  Nup_retrotrp_bd  54 lsqtPai..............fnvGssgsqanivsgRkIaq 80 
                      l+ tP i              +++ ss+s  + +++ +Ia+
       EPX74707.1  77 LGRTPHIvrinnrshirtldgVEGKSSESDLPLKQNTQIAV 117
                      56666555544444444444455666777777777777775 PP

  == domain 2  score: -16.9 bits;  conditional E-value: 1
  Nup_retrotrp_bd   7 pasvfgagnsntnfsfaksaestpfgFg..asqstp..............qsanspsaitapalsqtP 58 
                      pa +f++g  +      k  + + f+Fg  ++q  p                 ++ s+ ++++++q P
       EPX74707.1 576 PAPSFNFGQKSEEKEP-KEDNKASFSFGlpSQQQLPksatpsftfgeasgNKSAESSSKSPFSFGQLP 642
                      3444444444443222.111122222220022222244444444444443444445555555555555 PP

  == domain 3  score: -5.7 bits;  conditional E-value: 1
  Nup_retrotrp_bd   6 dpasvfgagnsntnfsfaksaestpfgFgasqstpqsanspsaitapalsqtPai......fnvGssg 67 
                      +p   f +g s t+     s +s  f+F+  +st q  + +s ++++a    Pa+      f+ G + 
       EPX74707.1 685 NPKPAFSFGQSGTA----ASLQSPEFSFNK-PSTDQKDA-GSTSGPFA-NAAPAMktetpkFSFGQTA 745
                      45555666677774....788888899998.88876544.45555555.5555554444445555544 PP

  == domain 4  score: -18.8 bits;  conditional E-value: 1
  Nup_retrotrp_bd   9 s 9  
                      s
       EPX74707.1 852 S 852
                      1 PP

  == domain 5  score: 2.4 bits;  conditional E-value: 0.014
  Nup_retrotrp_bd  23 aksaestpfgFga 35 
                      +  +++tpf+Fg+
       EPX74707.1 962 TTAPPATPFTFGS 974
                      7789*******97 PP

  == domain 6  score: -1.7 bits;  conditional E-value: 0.27
  Nup_retrotrp_bd    7 pasvfgagnsntnfsfaksaestpfgFgasqstp..qsanspsaitapa.lsqtPaifnvGssgsqan 71  
                       p s fg g snt++  ++  +s+ f+F+ ++s +   ++ s++a+t p+  s+t a+   Gss sq n
       EPX74707.1  979 PTSAFGSGPSNTAIGDNGGLQSSAFSFNNNNSGSapGFGMSNTASTKPPkTSNTSAPSAFGSSLSQPN 1046
                       89*************************99887654467777777766554788888888999888765 PP

  == domain 7  score: -15.5 bits;  conditional E-value: 1
  Nup_retrotrp_bd    3 gTpdpasvfgagnsntnfsfaksaestpfgFgasqstp...qsanspsaitapalsqtPaifnvGs 65  
                       + p+p s fg  n          a+st+f+Fgas  t      a++ps++++    +tP +fn Gs
       EPX74707.1 1074 NGPNPGSGFG--N-------VTQAPSTGFTFGASGNTIpsaFGAAKPSGFNTNIGNTTP-SFNFGS 1129
                       3455555444..2.......5678*********87664464456899***998855555.779998 PP

  == domain 8  score: 30.7 bits;  conditional E-value: 2e-11
  Nup_retrotrp_bd   12 gagnsntnfsf....aksaestpfgFgasqstpqsanspsaitapalsqtPai...fnvGssgsqanivsgRkIaqmrrRrr 86  
                       ++gn +  f+f     ++++ ++f+Fg  ++tp++ +  sa + pa    P     fn+Gs+++q n++ gRkIa++r+Rr+
       EPX74707.1 1117 NIGNTTPSFNFgspqPSNPPNAGFSFGG-TGTPAFSAGSSAAQSPA--PQPQGgiqFNLGSTNEQPNPPAGRKIAVPRSRRK 1195
                       5688888889988988999********9.********999999999..33433678**********************8886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1196 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       780  (0.0435049); expected 358.6 (0.02)
Passed bias filter:                      215  (0.0119917); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.93u 0.34s 00:00:01.27 Elapsed: 00:00:00.46
# Mc/sec: 7886.11
//
Query:       EPX74708.1  [L=165]
Description: AP-3 adaptor complex subunit Aps3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-53  180.8   0.4    1.5e-53  180.6   0.4    1.0  1  Clat_adaptor_s  Clathrin adaptor complex small chain


Domain annotation for each model (and alignments):
>> Clat_adaptor_s  Clathrin adaptor complex small chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  180.6   0.4   8.3e-58   1.5e-53       1     134 [.       1     138 [.       1     144 [. 0.94

  Alignments for each domain:
  == domain 1  score: 180.6 bits;  conditional E-value: 8.3e-58
                     -EEEEEEE-TTS-EEEEEESSSS-CHHHHHHHHHHHHHHHTT-SSS-SEEEETT....EEEEEEEETTEEEEEEEETTS-HHHHHHHHHHHHHHH CS
  Clat_adaptor_s   1 mikaililnkkgkvrlakfytavddkkkqklieevyelvsaRdsklsniveled....lkviYkryasLYFvvivdeqeneliilelihlfvesL 91 
                     mi+ai+i+n+kg++rl+kfyt+++++ +q+l+ e+y+ vs+R +  +n++e +      ++iY++ya+LYFv++vde e+el il+li++fve+L
      EPX74708.1   1 MIYAIFIFNNKGNPRLTKFYTPIEESDQQRLLGEIYQSVSNRTAASCNFLESSLiagkNRIIYRQYATLYFVFVVDEGESELGILDLIQVFVEAL 95 
                     89****************************************99998887765322345************************************ PP

                     HHHCTS-SHHHHHHCHHHHHHHHHCCEETTEES---HHHHHHC CS
  Clat_adaptor_s  92 dkyfgnVceldlvfnfekvylildEivsgGeiletskkevlkr 134
                     d++f+nVceldlvf+f+++++il+EivsgG +let+ +e++++
      EPX74708.1  96 DRCFNNVCELDLVFKFQEIHAILAEIVSGGLVLETNLNEIVAS 138
                     *****************************************76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       492  (0.0274416); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 1202.35
//
Query:       EPX74709.1  [L=436]
Description: DUF300 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-80  270.9  11.3    1.4e-80  270.6  11.3    1.1  1  Solute_trans_a  Organic solute transporter Ostalpha
  ------ inclusion threshold ------
        0.8    9.9   3.8       0.39   11.0   0.5    2.0  2  DUF4293         Domain of unknown function (DUF4293)


Domain annotation for each model (and alignments):
>> Solute_trans_a  Organic solute transporter Ostalpha
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  270.6  11.3   1.6e-84   1.4e-80       2     265 .]       6     269 ..       5     269 .. 0.95

  Alignments for each domain:
  == domain 1  score: 270.6 bits;  conditional E-value: 1.6e-84
  Solute_trans_a   2 liiagvfallallislililqhlrhytkpseQrkiirIllmvpiyavsSllsllfpsaavylelvrdcYeafviysFfsllleylggeealikal 96 
                     ++ +g+f+l++l++s+i+i++hl++y+kp +Qr ++rIllm++ y+++S+l ++  +  +++e++r++Yeaf++y+Ff+ll++ylgge+a +  l
      EPX74709.1   6 VAFCGTFVLISLALSTISIYSHLKNYRKPVLQRSVVRILLMIVTYSIVSFLTVYNERIGAFFEPFREMYEAFALYCFFCLLIDYLGGERAAVIIL 100
                     5789******************************************************************************************* PP

  Solute_trans_a  97 erd.ekkkllplnlclekvklt.lkflkrcklgvlQyvvvkpllaivslileslgvyc.e.sfspkfaylyltiiynvsvtlAlyalllfykalk 187
                     +++ ++ +l+p+n++ ++++l+ +++++ +k+g+lQy+++kp+l+i++l+   lg y+ e +    +  l++ ++yn+s+t++ly+l  f+++l+
      EPX74709.1 101 HGHlPRPRLWPMNHIQSDIDLSdPYTFLSIKRGILQYTWLKPFLIIATLLSRVLGIYEdEdKPVYVTSALWIGLLYNISITISLYSLTTFWICLH 195
                     ***55566*************99***********************************65433336678************************** PP

  Solute_trans_a 188 keLkpfkpvlKflciklvvfltfwQglvlsilvkvgviketkklsaediaagiqnllicvEMvlfailhlyaFpykeY 265
                     +eL pf+p++Kfl++k+++f+++wQ+++ls+  ++g+++ +    +  +    qn+l+c+EM++fa+ h++aF+ k+Y
      EPX74709.1 196 EELTPFRPFPKFLSVKAIIFASYWQQTLLSVAGWLGILPRK----HGIFILLDQNVLMCLEMPFFALSHWHAFRIKDY 269
                     ******************************9999**99985....677777778**********************99 PP

>> DUF4293  Domain of unknown function (DUF4293)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.5   4.4e-05      0.39      56     136 ..       6      90 ..       2      94 .. 0.67
   2 ?   -1.3   0.1      0.25   2.3e+03      43      75 ..     158     190 ..     140     192 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 4.4e-05
     DUF4293  56 vlvilllliailaliaIflyknRk......lQlrlclinllllvllyvllal.lllvnkanaaaeslgesslkiglilplialilnlL 136
                 v ++ + + + lal +I  y + k      lQ  +  + +ll++++y ++ + +++++   a  e++ ++ +++ ++  +++l++++L
  EPX74709.1   6 VAFCGTFVLISLALSTISIYSHLKnyrkpvLQRSV--VRILLMIVTYSIVSFlTVYNERIGAFFEPF-REMYEAFALYCFFCLLIDYL 90 
                 55666667777777777777776655555577665..555666666655555367777777778888.77888888888888888877 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.25
     DUF4293  43 taeaetsvnvsvwvlvilllliailaliaIfly 75 
                 + e++ + ++s +++ +l  ++++++l+++ ++
  EPX74709.1 158 EDEDKPVYVTSALWIGLLYNISITISLYSLTTF 190
                 455666677888888888888889999988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (436 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       447  (0.0249317); expected 358.6 (0.02)
Passed bias filter:                      272  (0.015171); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 3055.26
//
Query:       EPX74710.1  [L=340]
Description: DNA endonuclease III [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-19   70.6   0.0    3.3e-19   69.3   0.0    1.6  2  HhH-GPD   HhH-GPD superfamily base excision DNA repair protei
    2.7e-08   33.3   0.0    5.3e-08   32.3   0.0    1.5  1  HHH       Helix-hairpin-helix motif


Domain annotation for each model (and alignments):
>> HhH-GPD  HhH-GPD superfamily base excision DNA repair protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.3   0.0   3.7e-23   3.3e-19       1     107 [.      51     189 ..      51     190 .. 0.95
   2 ?   -2.1   0.0      0.59   5.3e+03      56      67 ..     239     295 ..     235     326 .. 0.49

  Alignments for each domain:
  == domain 1  score: 69.3 bits;  conditional E-value: 3.7e-23
                 HHHHHHTTS-HHHHHHHHHHHHHHHS.HCSHHHHHHSHHHHHHHHHTTSTTHHHHHHHHHHHHHHHH................................ CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................................ RF
     HhH-GPD   1 vsailsqqtsderanriierlferfg.fptpedladadeekLrelirelGfyrrKakyikelArilv................................ 66 
                 v+ +ls+qt+d +  + ++ l+e+   ++ ++d+ ++de +L++li+++Gf++rK  y+k++A+il                                 
  EPX74710.1  51 VALMLSSQTKDTVLGPTMKCLKENLPkGLCLQDIREIDEVSLNKLIEKVGFHNRKTTYLKKMAQILEekyggdipqtveelmsipgvgpkmgylcmgia 149
                 6789********************9999**********************************************************************9 PP

                 .S-SSS--TTSHHHHHHHHHHTTSSSSTTHHHHHHHHHHHHH CS
                 .xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
     HhH-GPD  67 .gkpdvlivvDvhvrrilkrlrsikekktkkkvekkleelle 107
                  + ++v+i vDvhv+ri + l+++++ kt+++++ +l+  l+
  EPX74710.1 150 wK-KNVGIGVDVHVHRISNILGWCHT-KTEEQTRLALQSFLP 189
                 54.579********************.6*****999987665 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.59
                 HHHHHHHHHHH..............................................S CS
                 xxxxxxxxxxx..............................................x RF
     HhH-GPD  56 kyikelArilv..............................................g 67 
                 k+++ +A+++                                               +
  EPX74710.1 239 KRLQ-TAKKVKrspsaspeidvvqdqqtvyeeiptgmnelppnalpgkkikletpleD 295
                 5553.45555544444444444444444444444444444444444444444444432 PP

>> HHH  Helix-hairpin-helix motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.3   0.0   5.9e-12   5.3e-08       1      24 [.     119     142 ..     119     148 .. 0.90

  Alignments for each domain:
  == domain 1  score: 32.3 bits;  conditional E-value: 5.9e-12
                 SHHHHHTSSHHHHHTSTT-SHHHH CS
         HHH   1 sleglipasreeLlalPGVGpktA 24 
                 +++g+ip ++eeL+++PGVGpk+ 
  EPX74710.1 119 KYGGDIPQTVEELMSIPGVGPKMG 142
                 599*******************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (340 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       559  (0.0311785); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 2329.00
//
Query:       EPX74711.1  [L=538]
Description: PHD finger containing protein Phf2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.3e-11   42.5   9.0    7.4e-11   41.8   9.0    1.4  1  PHD             PHD-finger
     0.0023   17.4   4.1      0.011   15.3   3.7    2.2  1  PHD_2           PHD-finger
     0.0088   16.0   5.1     0.0088   16.0   5.1    1.6  2  Prok-RING_1     Prokaryotic RING finger family 1
  ------ inclusion threshold ------
      0.029   14.7   0.0      0.066   13.6   0.0    1.6  1  Linker_histone  linker histone H1 and H5 family
      0.066   12.8   4.1       0.06   13.0   1.4    2.0  2  zf-PHD-like     PHD/FYVE-zinc-finger like domain
       0.27   11.3   2.6       0.54   10.4   2.6    1.5  1  zf-RRPl_C4      Putative ribonucleoprotein zinc-finger pf C4 
       0.47   10.4  13.0        0.3   11.0   5.6    2.3  2  C1_1            Phorbol esters/diacylglycerol binding domain 


Domain annotation for each model (and alignments):
>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.8   9.0   2.9e-14   7.4e-11       2      50 ..     235     286 ..     234     288 .. 0.91

  Alignments for each domain:
  == domain 1  score: 41.8 bits;  conditional E-value: 2.9e-14
                 BTTTTS.TTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSS..TBSSTTTH CS
         PHD   2 CavCkk.ksdeeeelvqCdgCkrwfHqkClkppleseekpeg..ewlCekCk 50 
                 C+vC++ +s  ++++v+CdgC++ fHq C++p+  ++  +++  ew+C+ C+
  EPX74711.1 235 CCVCQRlQSPPKNRIVFCDGCNTPFHQLCHEPNIPDSLLDSSsaEWFCNACS 286
                 99****99999**********************99877777689*******7 PP

>> PHD_2  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   3.7   4.1e-06     0.011       2      35 ..     247     285 ..     246     286 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 4.1e-06
       PHD_2   2 npllsCdkCsvaVHasCYGvs.....kesdgeeWlCrrC 35 
                 n +++Cd+C++ +H+ C   +      +s+++eW C+ C
  EPX74711.1 247 NRIVFCDGCNTPFHQLCHEPNipdslLDSSSAEWFCNAC 285
                 88***************9643111112344456****99 PP

>> Prok-RING_1  Prokaryotic RING finger family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   5.1   3.4e-06    0.0088       5      36 ..     233     265 ..     231     267 .. 0.83
   2 ?   -3.7   0.2       4.7   1.2e+04      23      31 ..     282     290 ..     281     292 .. 0.61

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 3.4e-06
  Prok-RING_1   5 kkCpvCgkelk.eedDiVvCpeCgtpyHraCye 36 
                   kC vC++  + +++ iV C+ C tp+H+ C e
   EPX74711.1 233 MKCCVCQRLQSpPKNRIVFCDGCNTPFHQLCHE 265
                  58****9865514689***************87 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 4.7
  Prok-RING_1  23 CpeCgtpyH 31 
                  C +C    H
   EPX74711.1 282 CNACSMRKH 290
                  666666666 PP

>> Linker_histone  linker histone H1 and H5 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   2.6e-05     0.066      21      62 ..     440     479 ..     411     485 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 2.6e-05
  Linker_histone  21 sSrqaIkkyikakykvvdvskfksllkkalkkgvekgelvqp 62 
                     +S+ +I +yi ++y   d + ++s + ++l+++v kg + + 
      EPX74711.1 440 ASLDSIFNYIHSNYG--DKHINNSDIIRTLNRLVRKGRVLRD 479
                     7999**********8..888899**************98775 PP

>> zf-PHD-like  PHD/FYVE-zinc-finger like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   1.4   2.3e-05      0.06       1      29 [.     235     263 ..     235     268 .. 0.94
   2 ?   -0.9   0.1      0.42   1.1e+03      17      37 ..     281     301 ..     274     315 .. 0.61

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2.3e-05
  zf-PHD-like   1 CdtCaeskdeekgqlvyCqGCslsyhkaC 29 
                  C +C+  ++  k ++v+C GC + +h+ C
   EPX74711.1 235 CCVCQRLQSPPKNRIVFCDGCNTPFHQLC 263
                  889**99999******************* PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.42
  zf-PHD-like  17 yCqGCslsyhkaClGkRsaRe 37 
                  +C  Cs+  h++ l + s+ +
   EPX74711.1 281 FCNACSMRKHQKPLSMGSTAK 301
                  466666666666665555444 PP

>> zf-RRPl_C4  Putative ribonucleoprotein zinc-finger pf C4 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   2.6   0.00021      0.54       2      65 ..     233     292 ..     232     308 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00021
  zf-RRPl_C4   2 kkCkyClskklknlnetvyCeaCeiyfkvknekqkvelvpike.lekislrdkLCtkCkekneke 65 
                 +kC  C++ +    n  v+C+ C+  f+     q  +  +i + l   s  +  C+ C+ +++++
  EPX74711.1 233 MKCCVCQRLQSPPKNRIVFCDGCNTPFH-----QLCHEPNIPDsLLDSSSAEWFCNACSMRKHQK 292
                 6999************************.....34444444432344555699*****9998875 PP

>> C1_1  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   5.6   0.00012       0.3      11      44 ..     232     265 ..     225     274 .. 0.91
   2 ?    3.9   0.6      0.02        51      26      41 ..     277     292 ..     270     296 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00012
                 --B-TTT-SB--SSSS-EEEETTT--EE-CCCCT CS
        C1_1  11 ptfCkhCgeflwgkekqglkCswCkllvHkkChe 44 
                 +++C+ C+ + +    +++ C+ C+  +H+ Che
  EPX74711.1 232 TMKCCVCQRLQSPPKNRIVFCDGCNTPFHQLCHE 265
                 689********889******************97 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.02
                 S-EEEETTT--EE-CC CS
        C1_1  26 kqglkCswCkllvHkk 41 
                 +  + C++C+++ H+k
  EPX74711.1 277 SAEWFCNACSMRKHQK 292
                 66799*********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (538 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       637  (0.035529); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 3821.75
//
Query:       EPX74712.1  [L=613]
Description: complexed with Cdc5 protein Cwf19 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.1e-38  130.4   0.0    6.4e-38  129.4   0.0    1.5  1  CwfJ_C_1       Protein similar to CwfJ C-terminus 1
    5.9e-21   75.2   0.6    5.9e-21   75.2   0.6    2.4  2  CwfJ_C_2       Protein similar to CwfJ C-terminus 2
     0.0016   18.4   0.5     0.0016   18.4   0.5    2.6  2  Bap31_Bap29_C  Bap31/Bap29 cytoplasmic coiled-coil domain
  ------ inclusion threshold ------
       0.14   12.3   1.4       0.49   10.5   0.3    2.2  2  DUF2120        Uncharacterized protein conserved in archaea (
        5.2    7.4   9.0       0.23   11.7   0.6    2.8  3  HALZ           Homeobox associated leucine zipper


Domain annotation for each model (and alignments):
>> CwfJ_C_1  Protein similar to CwfJ C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.4   0.0   1.8e-41   6.4e-38       3     122 .]     375     497 ..     373     497 .. 0.97

  Alignments for each domain:
  == domain 1  score: 129.4 bits;  conditional E-value: 1.8e-41
                 THHHHHHHHHH-S----SS---SS--S-B-SSEEEE---.S-SSTT-EEEEESS--SSTTSS-HHHHHHHHHHHHHHHHHHHHTT--EEEEEE-..SSS CS
    CwfJ_C_1   3 ekkrikasldsClfClsnpklekhlivsignkvYlalpk.gpLssgHvliipieHisallsldeevldeirkfrkalvkmykkqdkdavvfEis..ser 98 
                 + +++++ ldsC +C++ ++++ + ++++++++Yl+lp+  +L+++H+li+p++H+ + ls+de+++deir+f+k+++ m++++++ ++++E++   +r
  EPX74712.1 375 NLSKMNRALDSCPLCMNANSQPLAPVITLSHRAYLTLPTkPGLAKYHCLIVPMNHRVNALSCDEDEWDEIRNFMKCIALMFDSMGMGVIFYENApaPHR 473
                 5678999*******************************9899****************************************************999** PP

                 -----EEEEE--HHHHTTHHHHHH CS
    CwfJ_C_1  99 svHlaiqvipvpksiskkaelyfk 122
                 + H+ai+++pvp+++ + a++yf+
  EPX74712.1 474 YHHTAIECVPVPRRTLSLAPAYFR 497
                 **********************96 PP

>> CwfJ_C_2  Protein similar to CwfJ C-terminus 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   1.9         5   1.8e+04      87      87 ..      41      41 ..      20      83 .. 0.65
   2 !   75.2   0.6   1.6e-24   5.9e-21       1      99 []     506     608 ..     506     608 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 5
                H CS
    CwfJ_C_2 87 e 87
                +
  EPX74712.1 41 R 41
                2 PP

  == domain 2  score: 75.2 bits;  conditional E-value: 1.6e-24
                 TT-SS-S---HHHHH......SHHHHS-SSS--EEEEETTT-..-EEE----HHHH-TT..HHHHHHHHHTT--TTT.SS------S--H.HHHHHHHH CS
    CwfJ_C_2   1 ewsqhkklidfskkr......afrrslvknlpyfyvqfdykgekgyghviedeerfdlq..FareviaglLdlekrrkwrkpkrqskeeeekrveaFkk 91 
                 ewsqh+k+id+ +        afr+++vk+l yf+v+f+ +g  gyghv+e+e+ + ++   +r+v+a++L+l+ +  +r++ +++  ++    +aF++
  EPX74712.1 506 EWSQHRKIIDTMEGVekygkyAFRKMMVKELGYFHVWFTVDG--GYGHVVENEKLWGQHdqVPRQVFASMLNLPTEF-IRRRGKWTGVKD-PAEDAFRA 600
                 8***********766889999*********************..**********9987666***************9.999999999666.999***** PP

                 HHTTT--X CS
    CwfJ_C_2  92 awkkyDwT 99 
                 +++++DwT
  EPX74712.1 601 RFHPFDWT 608
                 *******9 PP

>> Bap31_Bap29_C  Bap31/Bap29 cytoplasmic coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.6       0.5   1.8e+03      29      49 ..     194     218 ..     191     219 .. 0.80
   2 !   18.4   0.5   4.5e-07    0.0016       1      36 [.     253     292 ..     253     307 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.5
  Bap31_Bap29_C  29 kEYDrLadehskl....desedKKd 49 
                    k++D+ ++e+++l    + ++  Kd
     EPX74712.1 194 KDFDDALEEREELdyrkATGKIRKD 218
                    789*********9888766666666 PP

  == domain 2  score: 18.4 bits;  conditional E-value: 4.5e-07
  Bap31_Bap29_C   1 keiekLkkeLkkkk....kDlealKkQaeglakEYDrLad 36 
                    +ei+kLk+e  +++    +++ealK+Q +  +k +D+ ++
     EPX74712.1 253 DEINKLKAEVLRAQargsSNYEALKQQYDAMHKNFDDSLN 292
                    59*******9999999*******************98554 PP

>> DUF2120  Uncharacterized protein conserved in archaea (DUF2120)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.3   0.00014      0.49      16      90 ..     248     328 ..     239     335 .. 0.78
   2 ?   -0.2   0.0      0.27   9.8e+02      32      62 ..     340     370 ..     335     394 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00014
     DUF2120  16 Skpl...ldkeeiLivrgvsrkkeeleeleskleellekldaeevdleseeakkliekldesireveeie...eevdafgl 90 
                 Skp    ++k +  ++r+ +r++ + e l+++ + + ++ d    d  s + k++++k d si e+++ e   ++ d++gl
  EPX74712.1 248 SKPTrdeINKLKAEVLRAQARGSSNYEALKQQYDAMHKNFDDSLNDASSSHLKSFTSKNDPSIEEMVQEEkllNKLDKHGL 328
                 6665111455566699********************************************998876554401145566665 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.27
     DUF2120  32 srkkeeleeleskleellekldaeevdlese 62 
                 sr +++l+ l+++ ++l +++  +e++le+ 
  EPX74712.1 340 SRYSNDLDYLDENANRLADRMSRREINLEQI 370
                 7888889999999999999999999999876 PP

>> HALZ  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.4       0.4   1.4e+03      13      31 ..     189     206 ..     188     207 .. 0.85
   2 ?   -2.7   0.1         2   7.3e+03      34      41 ..     254     261 ..     252     264 .. 0.49
   3 ?   11.7   0.6   6.4e-05      0.23       7      22 ..     273     288 ..     271     294 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.4
        HALZ  13 sYdaLksdydsLkkenekL 31 
                 +Y +Lk d+d  ++e+e+L
  EPX74712.1 189 RYGSLK-DFDDALEEREEL 206
                 699999.999999999987 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 2
        HALZ  34 elqeLkek 41 
                 e+++Lk+ 
  EPX74712.1 254 EINKLKAE 261
                 44444443 PP

  == domain 3  score: 11.7 bits;  conditional E-value: 6.4e-05
        HALZ   7 YdvLKasYdaLksdyd 22 
                 Y++LK++Yda++ ++d
  EPX74712.1 273 YEALKQQYDAMHKNFD 288
                 9***********9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (613 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1301  (0.072564); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.64u 0.27s 00:00:00.91 Elapsed: 00:00:00.44
# Mc/sec: 4167.95
//
Query:       EPX74713.1  [L=180]
Description: signal peptidase subunit Spc3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.4e-45  153.2   3.0      5e-45  153.0   3.0    1.0  1  SPC22      Signal peptidase subunit
  ------ inclusion threshold ------
      0.031   12.9   0.0      0.039   12.5   0.0    1.1  1  MurJ       Lipid II flippase MurJ
       0.05   13.8   0.3      0.091   12.9   0.3    1.4  1  Pilosulin  Ant venom peptides


Domain annotation for each model (and alignments):
>> SPC22  Signal peptidase subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.0   3.0   8.4e-49     5e-45       2     164 ..       7     173 ..       6     179 .. 0.91

  Alignments for each domain:
  == domain 1  score: 153.0 bits;  conditional E-value: 8.4e-49
       SPC22   2 lqRlnavlalaltvlavlvalialsslflklskakskisnvkvsvaksvrdygs.nrkkkdraklkfdldaDlsslfnWNtKqlFvyltaeYetkknev 99 
                 ++R++a ++ ++++l++l+a+i++++++ + +  k+  +nv+ ++ k +r y++ ++kk+++a++kfdldaD+s+l+nWNtK++ vyl+a+Y+t+k++v
  EPX74713.1   7 SNRASAFFSKVSSMLILLCAIITVQNIVKAPNVDKVFPANVHYAKYKPARFYHAfHNKKQNYAQVKFDLDADFSNLWNWNTKHVVVYLVASYPTEKHDV 105
                 68*************************7774455555556666555********99******************************************* PP

       SPC22 100 NqvvlWDkIirskedaklklknvksk...YslkdqeksLrgrkvtltLhwnvmPvvGlltygetagks 164
                 N+v++WD+I++++++++l++kn+ s+   ++++++++++++ ++++t+hw+v P+ G+l +g++ ++ 
  EPX74713.1 106 NNVIVWDRILSTPDESHLQVKNALSNlhaHPFHEYSNDFSNLEANYTMHWTVSPKLGFLAWGSGMSSL 173
                 **********************9988888*********************************987554 PP

>> MurJ  Lipid II flippase MurJ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   6.6e-06     0.039      48      86 ..       6      44 ..       2      60 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 6.6e-06
        MurJ 48 deekaaefvrkvltllilvlllvtligilaapllirlla 86
                 +++a++f++kv+ +lil+++++t+  i+ ap + +++ 
  EPX74713.1  6 TSNRASAFFSKVSSMLILLCAIITVQNIVKAPNVDKVFP 44
                5799****************************9988775 PP

>> Pilosulin  Ant venom peptides
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.3   1.5e-05     0.091       4      25 ..      19      40 ..      15      45 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.5e-05
                XXXXXXXXXXXXXXXXXXXXXX CS
   Pilosulin  4 sCLlLtLaiilvLtivhaPnve 25
                s L+L  aii v  iv aPnv+
  EPX74713.1 19 SMLILLCAIITVQNIVKAPNVD 40
                5677888*************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       604  (0.0336884); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1283.89
//
Query:       EPX74714.1  [L=426]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.7e-69  232.6   2.2    5.9e-69  232.3   2.2    1.1  1  DUF2434   Protein of unknown function (DUF2434)
  ------ inclusion threshold ------
       0.48   10.1   5.5        2.7    7.6   2.3    2.8  3  DUF4131   Domain of unknown function (DUF4131)


Domain annotation for each model (and alignments):
>> DUF2434  Protein of unknown function (DUF2434)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  232.3   2.2   6.6e-73   5.9e-69       1     293 [.      17     286 ..      17     287 .. 0.91

  Alignments for each domain:
  == domain 1  score: 232.3 bits;  conditional E-value: 6.6e-73
     DUF2434   1 ysNgTlsNgskCyllfeeytptllengtfingtsCyspiksigtrgkvGiafavlfalaivltlvnLrkhgklalpeekrfelvgrRwqwywlllvaal 99 
                 y NgT+sNg+ Cyl++ +++p ++e+g ++ng++C+sp+k+++ +g+vGi+ a+l +l+i+l+++n+ k+g     +   ++  +rR+++ywl+l++++
  EPX74714.1  17 YGNGTISNGTACYLWRYQNWPIITEEGKILNGMNCDSPVKKLAGHGAVGIVSACLGFLLIPLVFMNIGKFGVA--GA---TKGFQRRAEFYWLILLILV 110
                 89*********************************************************************33..33...34467************** PP

     DUF2434 100 alislfasvDvDRnylqelpivltsffwylllpatlavvWeavrhwGswqerqlidqdpfaleeddrr..skvefllPlvfYlflllnfflvvprsWta 196
                 +++s+fa++DvDR+++q+++++++sf+++  +p+++ v+W++v+++G++++r+ +  ++ +  +++ +  +k+e+ +P+v+Y++ ++ f+l+ ++sW++
  EPX74714.1 111 LAVSGFAYIDVDRSVIQGMSLCIFSFCFHSNVPILVLVYWHYVSTFGFIRWRERTVVGQEMDGNRRMQriEKMEYGMPVVVYILSMIGFLLAGFHSWGK 209
                 ***********************************************98877766655555444433335****************************9 PP

     DUF2434 197 iekqrspeqtleeakpaatdaRfkagafllviawlvivvslrhsikkYkprkrgllnrlvglvkavplrllllillalvriaYqvlvafkftispln 293
                 ++++++          +atdaRfka+a+l+++++l++  +++ ++ ++ +++r           + ++++    l++l+r +Y ++++++++++p n
  EPX74714.1 210 LARGEES---------VATDARFKASAILNLLGYLCCEGAFCMYLIEFGRDRR-----------KRWMSVNAGGLMVLIREVYGCVSSWNYHWNPSN 286
                 9999777.........********************************55444...........4599999***********************998 PP

>> DUF4131  Domain of unknown function (DUF4131)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   2.3    0.0003       2.7       9      49 ..      66     118 ..      59     133 .. 0.62
   2 ?    2.0   0.1     0.016   1.5e+02       7      64 ..     189     258 ..     184     281 .. 0.65
   3 ?   -1.7   0.0      0.22     2e+03      66      89 ..     344     367 ..     294     391 .. 0.58

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0003
     DUF4131   9 llalllllllllllllrr............rprrrvllllllllllallgfal 49 
                 ++ ++l +ll+ l++ +             ++r  + +l+ll+l+la++gfa+
  EPX74714.1  66 IVSACLGFLLIPLVFMNIgkfgvagatkgfQRRAEFYWLILLILVLAVSGFAY 118
                 333444444444444444699*******9955666666666666666666553 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.016
     DUF4131   7 lvllalllllllllllllrr............rprrrvllllllllllallgfalrapqpnandlsqlle 64 
                 +v+ +l ++ +ll+++ ++             ++ +  ++l ll +l++ + f+ +  + ++++  ++++
  EPX74714.1 189 VVVYILSMIGFLLAGFHSWGklargeesvatdARFKASAILNLLGYLCCEGAFCMYLIEFGRDRRKRWMS 258
                 4555555555555555555566788888877766666677777777777777777777777777666665 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 0.22
     DUF4131  66 gqeviveGvvaslpeltgsgtrfv 89 
                   + + +G+v ++ + +g+++r++
  EPX74714.1 344 TGTGTGTGTVHENEQERGERARME 367
                 333335677777777777777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (426 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1018  (0.0567795); expected 358.6 (0.02)
Passed bias filter:                      693  (0.0386525); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 3003.87
//
Query:       EPX74715.1  [L=387]
Description: transcription factor Esc1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-13   50.2   0.7    3.5e-13   49.3   0.7    1.5  1  HLH       Helix-loop-helix DNA-binding domain
     0.0006   18.5   5.4     0.0011   17.6   5.4    1.4  1  Macoilin  Macoilin family


Domain annotation for each model (and alignments):
>> HLH  Helix-loop-helix DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.3   0.7   3.9e-17   3.5e-13       2      53 .]     314     364 ..     313     364 .. 0.97

  Alignments for each domain:
  == domain 1  score: 49.3 bits;  conditional E-value: 3.9e-17
                 HHHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS
         HLH   2 raahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 
                 r++h+++Er+RR++i++ ++ L++ lP   +s+K sK   L++A++YI +L+
  EPX74715.1 314 RTNHKLAERKRRKEIKELFDDLKDALP-VDKSTKSSKWGLLTRAIQYIEQLK 364
                 89*************************.9********************995 PP

>> Macoilin  Macoilin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   5.4   1.3e-07    0.0011     289     467 ..      73     387 .]      55     387 .] 0.51

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 1.3e-07
    Macoilin 289 menkskskrlsksessgsesellveesvkskssssssssnknskkasags.agss..nssskkhsessksvtsssssknskkqklpaGkssaalkdaae 384
                  ++ s+s++++ s+ss++ s+ +++++ +s+ +++s+s++++s+++sa+s  + s  ++++ ++ +++++++ssss   +  ++ p  +s++ +  + +
  EPX74715.1  73 SSSSSSSNPVNDSSSSSTPSSAIMNDHPSSSRHTTSTSTSSSSSSSSASSnPNPSlpSAAPPSLTSNNNHTPSSSS--PDSVHSSPYSNSNNYMPLPSQ 169
                 3344444555555555555555555554444444333333222222221102222013334444444444444442..223334444444444444444 PP

    Macoilin 385 nslpnnqlskkda...................................................................................... 397
                 +s+++n   ++da                                                                                      
  EPX74715.1 170 QSVSSNPSIRNDAfttyvhsvqnpnpppplqplyltpqnlppssissfstdsstpslptplqipypdyhhqhhqsyyqhphkqqppaynpssdsstlsk 268
                 444444444444444444444444444444444444444444444444444444444444445555555555555555555555555555555555555 PP

    Macoilin 398 ....................................................lvrLeadikkLkaeLqasrqteqelrskissltseerslkselqqlk 444
                                                                       +  ++ik L  +L+ +  +++  +s    l +  r+++  ++qlk
  EPX74715.1 269 aypptgpyplnanvpygrnnylrrvtsmvpvhteymnpyvrnpelrtnhklaERKRRKEIKELFDDLKDALPVDKSTKSSKWGLLT--RAIQ-YIEQLK 364
                 55555555555555555555555555555555555555555555555555423356789999999999999999988876555555..6665.799999 PP

    Macoilin 445 kendllqtklhelvsakqkdkqt 467
                  e+  l +++++l +++  +kq+
  EPX74715.1 365 SEQMALEAHIRNLENQQPGEKQS 387
                 99999999999999999989885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (387 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1414  (0.0788666); expected 358.6 (0.02)
Passed bias filter:                      515  (0.0287244); expected 358.6 (0.02)
Passed Vit filter:                       111  (0.00619109); expected 17.9 (0.001)
Passed Fwd filter:                        26  (0.00145016); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.82u 0.33s 00:00:01.14 Elapsed: 00:00:00.47
# Mc/sec: 2451.63
//
Query:       EPX74716.1  [L=551]
Description: DNA 5' exonuclease [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.2e-27   93.6   0.0    1.8e-26   92.5   0.0    1.6  1  DRMBL          DNA repair metallo-beta-lactamase
    4.5e-05   23.1   0.2    8.7e-05   22.1   0.2    1.4  1  Lactamase_B_2  Beta-lactamase superfamily domain
     0.0042   17.1   0.0     0.0095   16.0   0.0    1.6  1  Lactamase_B    Metallo-beta-lactamase superfamily


Domain annotation for each model (and alignments):
>> DRMBL  DNA repair metallo-beta-lactamase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.5   0.0     3e-30   1.8e-26       2     109 ..     396     519 ..     395     520 .. 0.91

  Alignments for each domain:
  == domain 1  score: 92.5 bits;  conditional E-value: 3e-30
       DRMBL   2 elesllttdpseaqihlvslkklekeklekylkalkekfdsvlafrPtGWtkkekkkkdlekikess..................ksrekisiyrvpYS 82 
                 el++llt+dp++a++h+v+++ ++ ++l +yl++ + +f++v+++r tGWt+++ + k  +  ++                    + +ek+  + +pYS
  EPX74716.1 396 ELLDLLTDDPTQASVHMVTMGGIQPSSLLEYLEQHN-SFERVIGYRVTGWTFQPLE-KRADLSSNLDsiisrppkfvshdlramrGASEKVAAFVAPYS 492
                 67899****************************988.9****************74.444433444479****************9************* PP

       DRMBL  83 eHSSfrELkefvkslkpkkiiptVnvg 109
                 eHSSf EL++f+ s+++ + iptVn+g
  EPX74716.1 493 EHSSFYELTMFCLSMNILTTIPTVNMG 519
                 *************************97 PP

>> Lactamase_B_2  Beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.2   1.4e-08   8.7e-05      27     151 ..     196     303 ..     184     356 .. 0.75

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 1.4e-08
                    -..SEEEEE-SS--HHHHGGGGCCCCC--EEEEEEEEHHHHHHCCTTCGHHHCHTTTTEEEEEE-TTSEEEECSTTEEEEEEEE-EE--CTCCE-T CS
  Lactamase_B_2  27 elppidaVllthaHyDHlaglltlrelrpkklplyapkgvlavleanfvylaleeepavnvheldwgesfelgdggleitatparhksgrrldrna 122
                    +++ ++a +l+h H+DH+ gl +  e +    p+y+++ ++  l + ++ +    +    vh l ++e++ +   g+++ ++ a+h  g       
     EPX74716.1 196 DIDGVEAYFLSHFHADHYGGLSSKWE-H---GPIYCSEVTGNLLVNILHVDE---K---YVHRLSLNEPHNIL--GVTVYLIDANHCPGS------ 273
                    56678888***********9999888.3...48****999999988854333...3...578**********5..799999*99999999...... PP

                    TTSEEEEEE....CTTEEEEEESS-S---HHHH CS
  Lactamase_B_2 123 gdtlGlrie....gggkrvyyigDtgyipeeig 151
                       + +++e    +++krv+++gD    ++++ 
     EPX74716.1 274 ---AMFLFEtlheNKTKRVLHCGDFRASKAHVT 303
                    ...555555556799999******998776543 PP

>> Lactamase_B  Metallo-beta-lactamase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   1.6e-06    0.0095      41      62 ..     196     217 ..     146     229 .. 0.79

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.6e-06
                  GGGGEEEEE-SBSSHHHHTTGG CS
  Lactamase_B  41 kpkdvdavilTHlHlDHiGglg 62 
                  +++ v+a +l+H+H+DH+Ggl 
   EPX74716.1 196 DIDGVEAYFLSHFHADHYGGLS 217
                  67889999************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (551 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       417  (0.0232584); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.23s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 4056.28
//
Query:       EPX74717.1  [L=121]
Description: hypothetical protein SOCG_02199 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       310  (0.0172904); expected 358.6 (0.02)
Passed bias filter:                      235  (0.0131073); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.25s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 931.02
//
Query:       EPX74718.1  [L=376]
Description: COP9/signalosome complex subunit Csn4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.4e-07   31.2   0.3    9.9e-07   29.2   0.0    2.1  2  PCI        PCI domain
  ------ inclusion threshold ------
      0.056   13.8   0.2      0.056   13.8   0.2    2.6  2  TPR_12     Tetratricopeptide repeat
      0.085   12.7   0.0       0.34   10.8   0.0    1.9  2  AAA_lid_2  AAA lid domain


Domain annotation for each model (and alignments):
>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0         1     6e+03      13      28 ..     112     126 ..      90     148 .. 0.58
   2 !   29.2   0.0   1.7e-10   9.9e-07      47     103 ..     295     351 ..     267     352 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 1
                 TSHHHHHHHHHHHHHH CS
         PCI  13 gnlsgfseelkdleee 28 
                  nl ++ e+l+++ ++
  EPX74718.1 112 ENLCSALETLEKH-AN 126
                 3344444444444.22 PP

  == domain 2  score: 29.2 bits;  conditional E-value: 1.7e-10
                 HHHHHHHHHHCESEEEHHHHHHHHTSSHHHHHHHHHHHHHTTSSSEEEETTTTEEEE CS
         PCI  47 rerllrqvskiyssislerlaklldlsvdevEkilvklIrdgeirakidqesgivvf 103
                  e++l  vs +y+  sle+lak ++++++e++++l ++I + +ir++idq +g+v+f
  EPX74718.1 295 LETNLLFVSDFYEVASLESLAKIFGITTKELDSVLTNMIFQHRIRVTIDQFAGYVSF 351
                 6889999***********************************************987 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.1      0.81   4.9e+03       9      27 ..      22      41 ..      19      58 .. 0.74
   2 ?   13.8   0.2   9.3e-06     0.056       6      75 ..      99     165 ..      94     167 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.81
      TPR_12  9 laavl.rrlgrydeAlelle 27
                la+ + +++g y+e +++ +
  EPX74718.1 22 LALHYtNEQGLYEELRSCIQ 41
                67777566888888776655 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 9.3e-06
      TPR_12   6 lnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealaia 75 
                 l  laav  +  +y+  ++ le+    a+  l++d ++++  ++ Lg+ y ++g++e+A+ l + ++ ia
  EPX74718.1  99 L-LLAAVFEAENDYENLCSALETLEKHAN--LETDLEQLLLLRIRLGENYIKFGKPEKAILLMRTSMPIA 165
                 5.79******************9999995..56*****************************99998775 PP

>> AAA_lid_2  AAA lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   5.7e-05      0.34      35      56 ..     261     282 ..     258     292 .. 0.88
   2 ?   -2.1   0.0       0.6   3.6e+03      49      56 ..     332     339 ..     329     346 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 5.7e-05
   AAA_lid_2  35 rdyVtpeDvkeaaplVLaHRlr 56 
                 r++VtpeD   + p+ L+H ++
  EPX74718.1 261 RNFVTPEDANSILPFLLPHQVQ 282
                 99*****************987 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.6
   AAA_lid_2  49 lVLaHRlr 56 
                 ++++HR+r
  EPX74718.1 332 MIFQHRIR 339
                 7899**99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (376 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       557  (0.031067); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.23s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 2750.23
//
Query:       EPX74719.1  [L=130]
Description: 40S ribosomal protein S15a [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.1e-23   80.9   0.3    1.2e-22   80.2   0.3    1.4  1  Ribosomal_S8  Ribosomal protein S8


Domain annotation for each model (and alignments):
>> Ribosomal_S8  Ribosomal protein S8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.2   0.3   6.9e-27   1.2e-22       3     127 .]       7     130 .]       5     130 .] 0.81

  Alignments for each domain:
  == domain 1  score: 80.2 bits;  conditional E-value: 6.9e-27
                   HHHHHHHHHHHHHTT-SEEEE.E--HHHHHHHHHHHHCTSEEEEEEE.CCCCCC..EEEEE-BSSS-SBSSS.....EEEE-SBTTC--EE-CCC-- CS
  Ribosomal_S8   3 iadmltrirNaekakkeevev.pasklkeeilkvLkeeGyikdfeve.eekkkk..ikielkynkkkksvik.....klkrvskpgrrvYakvkelp 90 
                   ++d+l++i Nae++++++v + p+sk++ + l+v++++Gyi++fe   ++++ k  i++++++nk  ++vi+     klk+++k   +       lp
    EPX74719.1   7 LSDCLNNIVNAERRGRRQVLIrPSSKVIVKFLTVMQKHGYIDEFEEIdDHRSGKivIQLNGRINK--CGVISprfniKLKDIEKWVNN------LLP 95 
                   89********************************************8555556633555555555..*****6666666666663333......233 PP

                   -CGGGTSEEEEEETTEEEEHHHHHHCT--EEEEEEEE CS
  Ribosomal_S8  91 kvlnglGiaivsTskGvmtdkeArkkkvGGevlayvw 127
                      + +Gi++++Ts+G+m+++eAr+k +GG++l + +
    EPX74719.1  96 --SRQVGIIVLTTSRGIMSHNEARAKDTGGKILGFFY 130
                   ..3559***************************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       530  (0.029561); expected 358.6 (0.02)
Passed bias filter:                      485  (0.0270511); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.27s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 925.35
//
Query:       EPX74720.1  [L=109]
Description: DNA-directed RNA polymerase III complex subunit Rpc11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.1e-19   69.9  15.4    3.4e-19   68.4   4.2    3.0  2  TFIIS_C         Transcription factor S-II (TFIIS)
    1.5e-15   56.8   0.4    1.5e-15   56.8   0.4    2.8  3  RNA_POL_M_15KD  RNA polymerases M/15 Kd subunit
    3.4e-05   23.7   6.7     0.0047   16.9   0.4    2.3  2  Zn_Tnp_IS1595   Transposase zinc-ribbon domain
  ------ inclusion threshold ------
      0.036   14.0   5.0      0.048   13.6   1.3    2.4  2  Nudix_N_2       Nudix N-terminal
      0.044   13.6   2.5       0.57   10.0   0.0    3.1  3  zf-C4_Topoisom  Topoisomerase DNA binding C4 zinc finger
        0.1   12.9   7.4       0.66   10.3   0.1    2.9  3  C1_2            C1 domain
       0.12   12.1   1.3       0.18   11.5   0.1    2.0  2  Baculo_LEF5_C   Baculoviridae late expression factor 5 C-term
       0.15   11.5   0.0       0.15   11.5   0.0    3.2  4  zf-ribbon_3     zinc-ribbon domain
        0.2   11.0   3.0        1.2    8.6   0.8    2.4  2  zf-TFIIB        Transcription factor zinc-finger
       0.42   10.5   6.9        5.3    7.0   0.0    2.7  2  DUF3797         Domain of unknown function (DUF3797)
       0.61    9.6   6.6        5.3    6.7   1.7    2.5  2  TF_Zn_Ribbon    TFIIB zinc-binding
        1.5    8.6   8.8        1.6    8.6   1.6    2.8  2  zinc_ribbon_10  Predicted integral membrane zinc-ribbon metal
        2.4    8.5  10.5        4.7    7.5   2.9    3.1  2  C1_4            TFIIH C1-like domain


Domain annotation for each model (and alignments):
>> TFIIS_C  Transcription factor S-II (TFIIS)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   3.4     0.012        17       3      38 ..       4      32 ..       2      33 .. 0.87
   2 !   68.4   4.2   2.5e-22   3.4e-19       3      39 .]      69     107 ..      67     107 .. 0.92

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.012
     TFIIS_C  3 CpkCgsreayffqlQtRsaDEpmtvfykCtkCghrW 38
                Cp Cg++ ++ +       DE+    + C++C +++
  EPX74720.1  4 CPTCGNHLVIAI-------DEEGRNAFDCKTCPYQF 32
                999999999966.......99999999999998887 PP

  == domain 2  score: 68.4 bits;  conditional E-value: 2.5e-22
     TFIIS_C   3 Cpk..CgsreayffqlQtRsaDEpmtvfykCtkCghrWr 39 
                 C +  C++++ayffqlQ+RsaDEpm++fy+CtkC+++Wr
  EPX74720.1  69 CDNskCDNNRAYFFQLQIRSADEPMSTFYRCTKCKFQWR 107
                 66444*********************************8 PP

>> RNA_POL_M_15KD  RNA polymerases M/15 Kd subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.8   0.4   1.1e-18   1.5e-15       1      35 [.       1      36 [.       1      37 [. 0.97
   2 ?   -1.3   0.3       1.5   2.1e+03      22      26 ..      67      71 ..      60      76 .. 0.59
   3 ?    1.6   0.1      0.19   2.6e+02      21      28 ..      95     103 ..      84     105 .. 0.67

  Alignments for each domain:
  == domain 1  score: 56.8 bits;  conditional E-value: 1.1e-18
                    EEBESTTTSBEEEEECSCCCE.EEESSSS-EEESSC CS
  RNA_POL_M_15KD  1 lkFCpkCgNlLlpkedkegkn.feCrqCgYeepadq 35
                    ++FCp+CgN+L ++ d+eg+n f+C +C+Y +p+++
      EPX74720.1  1 MQFCPTCGNHLVIAIDEEGRNaFDCKTCPYQFPISA 36
                    9********************************985 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 1.5
                    EEESS CS
  RNA_POL_M_15KD 22 feCrq 26
                    ++C++
      EPX74720.1 67 VACDN 71
                    67764 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.19
                     E.EEESSSS CS
  RNA_POL_M_15KD  21 n.feCrqCg 28 
                       + C +C+
      EPX74720.1  95 TfYRCTKCK 103
                     368899997 PP

>> Zn_Tnp_IS1595  Transposase zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.4   3.4e-06    0.0047      21      46 .]       4      31 ..       1      31 [. 0.88
   2 !   10.0   1.1   0.00047      0.65      23      46 .]      73     105 ..      64     105 .. 0.92

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 3.4e-06
  Zn_Tnp_IS1595 21 CPhCgsrkayrikt..rglfqCkeCrkq 46
                   CP Cg+  ++ i    r  f Ck C +q
     EPX74720.1  4 CPTCGNHLVIAIDEegRNAFDCKTCPYQ 31
                   *******888888888*********987 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00047
  Zn_Tnp_IS1595  23 hCgsrkayrikt.........rglfqCkeCrkq 46 
                    +C + +ay+++             ++C +C+ q
     EPX74720.1  73 KCDNNRAYFFQLqirsadepmSTFYRCTKCKFQ 105
                    89999***99999999***************87 PP

>> Nudix_N_2  Nudix N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   1.3   3.5e-05     0.048       2      28 ..       3      28 ..       2      30 .. 0.79
   2 ?    1.2   0.1      0.26   3.6e+02      23      29 ..      97     103 ..      94     104 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 3.5e-05
                B-TTT--B-EEE--TT-SS-EEEETTT CS
   Nudix_N_2  2 FCsqCGtpvelripdgDnreRlvCpaC 28
                FC+ CG+ +  +i d++ r  + C+ C
  EPX74720.1  3 FCPTCGNHLVIAI-DEEGRNAFDCKTC 28
                *************.5666666667777 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.26
                 EEETTTT CS
   Nudix_N_2  23 lvCpaCg 29 
                 ++C++C 
  EPX74720.1  97 YRCTKCK 103
                 5799997 PP

>> zf-C4_Topoisom  Topoisomerase DNA binding C4 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   0.00041      0.57       4      13 ..       4      13 ..       1      23 [. 0.86
   2 ?    1.3   0.2      0.22     3e+02      22      34 ..      67      78 ..      61      80 .. 0.83
   3 ?    0.2   0.0      0.49   6.7e+02      20      32 ..      95     104 ..      83     108 .. 0.68

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00041
                    -SSS--EEEE CS
  zf-C4_Topoisom  4 CPkCggdLvl 13
                    CP Cg++Lv+
      EPX74720.1  4 CPTCGNHLVI 13
                    ********97 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.22
                    EEESST.T----E CS
  zf-C4_Topoisom 22 vGCsnYPeCkftk 34
                    v+C+n  +C++++
      EPX74720.1 67 VACDNS-KCDNNR 78
                    799996.999876 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.49
                     EEEEESST.T--- CS
  zf-C4_Topoisom  20 kFvGCsnYPeCkf 32 
                     +F+ C+    Ckf
      EPX74720.1  95 TFYRCTK---CKF 104
                     6777776...766 PP

>> C1_2  C1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.4    0.0089        12      20      41 ..       3      31 ..       1      39 [. 0.75
   2 ?   -1.5   0.1       2.4   3.3e+03      24      29 ..      69      74 ..      60      82 .. 0.59
   3 ?   10.3   0.1   0.00048      0.66      30      42 ..      94     106 ..      89     109 .] 0.80

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0089
        C1_2 20 nCsaCgrk....idgff...YsCseCdfs 41
                 C +Cg+     id++    + C++C ++
  EPX74720.1  3 FCPTCGNHlviaIDEEGrnaFDCKTCPYQ 31
                68888888888765555678999889776 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 2.4
        C1_2 24 Cgrkid 29
                C+++ +
  EPX74720.1 69 CDNSKC 74
                444322 PP

  == domain 3  score: 10.3 bits;  conditional E-value: 0.00048
        C1_2  30 gffYsCseCdfsl 42 
                 ++fY+C++C+f+ 
  EPX74720.1  94 STFYRCTKCKFQW 106
                 567********85 PP

>> Baculo_LEF5_C  Baculoviridae late expression factor 5 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.2       5.7   7.8e+03      36      41 ..       3       8 ..       2       9 .. 0.78
   2 ?   11.5   0.1   0.00013      0.18      23      40 ..      85     102 ..      82     104 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 5.7
  Baculo_LEF5_C 36 yCskCg 41
                    C  Cg
     EPX74720.1  3 FCPTCG 8 
                   599998 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 0.00013
  Baculo_LEF5_C  23 QnRagDEivsfvryCskC 40 
                    Q R+ DE  s    C kC
     EPX74720.1  85 QIRSADEPMSTFYRCTKC 102
                    99*****8888888**** PP

>> zf-ribbon_3  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00011      0.15       2      11 ..       1      11 [.       1      17 [. 0.81
   2 ?   -1.1   0.5         1   1.4e+03      18      21 ..      27      30 ..      23      30 .. 0.62
   3 ?   -2.1   0.4       2.1   2.9e+03      17      17 ..      72      72 ..      66      77 .. 0.52
   4 ?   -0.0   0.2      0.46   6.4e+02      19      23 ..      99     103 ..      96     105 .. 0.60

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00011
  zf-ribbon_3  2 tvrCPnCGa.p 11
                 +++CP CG+ +
   EPX74720.1  1 MQFCPTCGNhL 11
                 789*****954 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 1
  zf-ribbon_3 18 vCpy 21
                 +Cpy
   EPX74720.1 27 TCPY 30
                 5655 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 2.1
  zf-ribbon_3 17 n 17
                 +
   EPX74720.1 72 S 72
                 2 PP

  == domain 4  score: -0.0 bits;  conditional E-value: 0.46
  zf-ribbon_3  19 CpyCG 23 
                  C++C 
   EPX74720.1  99 CTKCK 103
                  55554 PP

>> zf-TFIIB  Transcription factor zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.8   0.00085       1.2       2      23 ..       4      29 ..       3      30 .. 0.71
   2 ?    2.3   0.1     0.077   1.1e+02      19      26 ..      96     103 ..      85     106 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00085
    zf-TFIIB  2 CPkCqdele....eserggveidyCp 23
                CP+C++ l+    e  r+ + +++Cp
  EPX74720.1  4 CPTCGNHLViaidEEGRNAFDCKTCP 29
                *********65544445666666665 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.077
    zf-TFIIB  19 idyCpqCr 26 
                 +++C++C+
  EPX74720.1  96 FYRCTKCK 103
                 78999995 PP

>> DUF3797  Domain of unknown function (DUF3797)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.0    0.0038       5.3      16      24 ..       4      12 ..       2      20 .. 0.85
   2 ?    3.4   3.9     0.052        72      19      46 ..      69     104 ..      65     105 .. 0.67

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0038
     DUF3797 16 CPeCgNnkv 24
                CP CgN  v
  EPX74720.1  4 CPTCGNHLV 12
                ******876 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.052
     DUF3797  19 CgNnkvlNsegkv....iiedd....tfyreCkCgf 46 
                 C N k  N+ +      i + d    tfyr  kC f
  EPX74720.1  69 CDNSKCDNNRAYFfqlqIRSADepmsTFYRCTKCKF 104
                 888888888886555542232234559***999987 PP

>> TF_Zn_Ribbon  TFIIB zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   1.7    0.0038       5.3       2      25 ..       3      28 ..       2      30 .. 0.82
   2 ?    5.3   0.2      0.01        14      14      25 ..      91     102 ..      73     102 .. 0.87

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0038
                  EETTTTCEE.CHEE.TSTTCEEESSS CS
  TF_Zn_Ribbon  2 kCPnCgstn.lveD.pergelvCtdC 25
                   CP Cg+   +  D + r+ + C+ C
    EPX74720.1  3 FCPTCGNHLvIAIDeEGRNAFDCKTC 28
                  5******9977666488888899988 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.01
                   ETSTTCEEESSS CS
  TF_Zn_Ribbon  14 DpergelvCtdC 25 
                   +p+++ ++Ct+C
    EPX74720.1  91 EPMSTFYRCTKC 102
                   5999******** PP

>> zinc_ribbon_10  Predicted integral membrane zinc-ribbon metal-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.9      0.05        69      25      50 ..       4      28 ..       3      32 .. 0.80
   2 ?    8.6   1.6    0.0011       1.6       4      52 ..      48     104 ..      46     106 .. 0.66

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.05
  zinc_ribbon_10 25 CskChshnGlapkeeleevkyrCpkC 50
                    C++C +h   a  +e  +  + C  C
      EPX74720.1  4 CPTCGNHLVIA-IDEEGRNAFDCKTC 28
                    99999999888.67777778999888 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0011
  zinc_ribbon_10   4 rvldvLvGddetsaknryalICskChshnGlap........keeleevkyrCpkCga 52 
                     ++ dvL Gd+    ++   + C + +  n+ a          +e+  + yrC kC++
      EPX74720.1  48 KIDDVLGGDEAFESNQQTEVACDNSKCDNNRAYffqlqirsADEPMSTFYRCTKCKF 104
                     4555665555556666778888766666665544566675567777779******97 PP

>> C1_4  TFIIH C1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.9     0.034        47       2      37 ..       4      34 ..       3      44 .. 0.72
   2 ?    7.5   2.9    0.0034       4.7      18      33 ..      89     104 ..      53     106 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.034
        C1_4  2 CygCqkkfpklakkkkdeeltssryrCekCkndFCi 37
                C +C +++  +++++         + C++C  +F i
  EPX74720.1  4 CPTCGNHLVIAIDEEG-----RNAFDCKTCPYQFPI 34
                6666666666666643.....57899*999999977 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0034
        C1_4  18 deeltssryrCekCkn 33 
                  +e +s++yrC kCk 
  EPX74720.1  89 ADEPMSTFYRCTKCKF 104
                 45689*********95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       655  (0.036533); expected 358.6 (0.02)
Passed bias filter:                      320  (0.0178482); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.44
# Mc/sec: 742.25
//
Query:       EPX74721.1  [L=437]
Description: serine hydrolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.8e-48  165.0   0.0    3.8e-48  164.0   0.0    1.5  1  FSH1           Serine hydrolase (FSH1)
     0.0019   18.1   0.1       0.38   10.5   0.0    2.3  2  Abhydrolase_2  Phospholipase/Carboxylesterase
  ------ inclusion threshold ------
      0.065   12.8   0.0       0.13   11.8   0.0    1.4  1  DLH            Dienelactone hydrolase family


Domain annotation for each model (and alignments):
>> FSH1  Serine hydrolase (FSH1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.0   0.0   6.3e-52   3.8e-48       2     210 ..       6     215 ..       3     217 .. 0.90

  Alignments for each domain:
  == domain 1  score: 164.0 bits;  conditional E-value: 6.3e-52
        FSH1   2 skkkkiLcLhGytqsgeiFraktsalrkllkklnvelvyldaplelaekadlpkseseeee.kseeeeesraWfrkkde.kneyegleesldavkdyik 98 
                 s+k+k+LcLhGy+++g++F+ k++alr+++ + ++el+++++p++l++ +   ++++e++e +   ++++ +W+r ++  +++  + + s ++++ yi+
  EPX74721.1   6 SSKLKVLCLHGYGETGNLFSVKMRALREHMVN-DIELYFPTGPIKLSNDKGQVDYSDEDSEdSLHVASTTCGWWRIDEYgDSKTLEPKISYEHLASYIR 103
                 479****************************9.*************7777777777777665777889999****99987889999999********** PP

        FSH1  99 engpfdGiiGFSqGaalaallaslleellkea..shpslkfailvsGfkleepkyeeyyeedkiqtptLhvlGelDtvvdeerseaLaeafknsskvlk 195
                 ++gpfdGiiGFSqG+ la  la+ +   + ++   +++++f i++sG+    +   e   e k+++ptLh+lG+ D+v + e s +L+e++++ s+vl+
  EPX74721.1 104 KHGPFDGIIGFSQGSNLAVNLAMFVTLPKYQEyfGQKDFRFGIFFSGYYRALSINGEIH-EIKLKIPTLHFLGKYDNVLSTESSSTLIEVCED-SQVLF 200
                 ******************99998877766655789*************99888777766.9999*****************************.***** PP

        FSH1 196 HpggHfvPnkkeyvd 210
                 Hpg+H++P+ + yv+
  EPX74721.1 201 HPGAHHIPSPSAYVE 215
                 ********9988875 PP

>> Abhydrolase_2  Phospholipase/Carboxylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.1   0.0    0.0029        17      16      51 ..      10      47 ..       2      57 .. 0.64
   2 !   10.5   0.0   6.4e-05      0.38     109     200 ..     111     206 ..     110     223 .. 0.63

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0029
                   EEEEE--TT--SHHHHHHHH...TT--TTEEEEEE--- CS
  Abhydrolase_2 16 vviflHGlGdsghawaeaakt..eaalpnikfifphgp 51
                    v+ lHG+G++g++++  ++   e   + i++ fp gp
     EPX74721.1 10 KVLCLHGYGETGNLFSVKMRAlrEHMVNDIELYFPTGP 47
                   57889*******88765444211344445555566555 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 6.4e-05
                    EEEETHHHHHHHHHH..HT-SS..--SEE......EEES---TTGGGTTTTS-GGGGG-EEEEEEETT-SSS-HHHHHHHHHHHHTTS-GEEEEEE CS
  Abhydrolase_2 109 igGFSqGaalalyla..ltlpk..klggi......vafsgalplsqklessatavtkklpilqiHgeeDpvvplalgkaakevlkkllkkvelksy 194
                    i+GFSqG  la+ la  +tlpk  +++g       + fsg +    +++ +  ++  k+p l+  g+ D+v+    ++++ e    +++ ++ + +
     EPX74721.1 111 IIGFSQGSNLAVNLAmfVTLPKyqEYFGQkdfrfgIFFSGYYRA-LSINGEIHEIKLKIPTLHFLGKYDNVLSTESSSTLIE----VCE-DSQVLF 200
                    89******888665511566666655543222222567887654.4455567777778999999999999987666555544....444.333444 PP

                    TT--SS CS
  Abhydrolase_2 195 eglaHs 200
                    + +aH 
     EPX74721.1 201 HPGAHH 206
                    445555 PP

>> DLH  Dienelactone hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.2e-05      0.13     101     187 ..     110     206 ..      85     209 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.2e-05
         DLH 101 gvvGfCmGGalalllaaevpevdaavafYG...............lspekeleeaakikapilalfgeeDefipadevekleealkaanvdlelkvYpg 184
                 g++Gf  G +la++la  v ++     ++G                   +  ++  k+k p l ++g+ D++   ++  +l e +     d ++  +pg
  EPX74721.1 110 GIIGFSQGSNLAVNLAMFV-TLPKYQEYFGqkdfrfgiffsgyyrALSINGEIHEIKLKIPTLHFLGKYDNVLSTESSSTLIEVC----EDSQVLFHPG 203
                 89*****************.79999****************9998666667777889********************99999999....5666777888 PP

         DLH 185 agH 187
                 a H
  EPX74721.1 204 AHH 206
                 888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (437 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       383  (0.021362); expected 358.6 (0.02)
Passed bias filter:                      349  (0.0194657); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 2848.07
//
Query:       EPX74722.1  [L=813]
Description: O-mannosyltransferase Ogm1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-65  221.0  16.1    1.7e-65  221.0  16.1    2.1  2  PMT       Dolichyl-phosphate-mannose-protein mannosyltransfer
    4.8e-44  150.3  11.7    4.8e-44  150.3  11.7    2.3  3  PMT_4TMC  C-terminal four TMM region of protein-O-mannosyltra
    3.7e-33  115.0   0.0      6e-33  114.3   0.0    1.3  1  MIR       MIR domain
  ------ inclusion threshold ------
       0.15   12.2   5.6         14    5.8   0.0    4.0  3  DUF962    Protein of unknown function (DUF962)


Domain annotation for each model (and alignments):
>> PMT  Dolichyl-phosphate-mannose-protein mannosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  221.0  16.1   3.8e-69   1.7e-65       2     243 ..      40     283 ..      39     285 .. 0.99
   2 ?   -0.4   1.4      0.15   6.8e+02     186     219 ..     582     612 ..     567     633 .. 0.74

  Alignments for each domain:
  == domain 1  score: 221.0 bits;  conditional E-value: 3.8e-69
         PMT   2 iltllallirlwrlslpnsvvfdevhfgkfasdYlehsffmdvhpplgkmllalggyLagkdgnftfesigaeyypenvpyvslRlfsallgslivplv 100
                 +lt++a++ir++rl++p +vvf+e+++ ++a dY+ ++f mdv+pplgk+ll++g+ ++  d+n+   s+ ++++p+  +   lRl  a +gsl+ pl+
  EPX74722.1  40 LLTVVAFAIRVQRLMIPSKVVFEELRYVNYALDYASNKFVMDVYPPLGKLLLSFGLTFFNSDPNLAGVSSTGQEFPSIETARRLRLIVAGFGSLLIPLM 138
                 79************************************************************************************************* PP

         PMT 101 yltllelgfskltallaallvllenslitlsryilldspLlfftllsmyclvkfe..rkapfsrswwlwllltgvalglavsvKwvglftvllvgllli 197
                 y  ++ +  sk +a la+++ +++n+lit+sry+++++p lff+ l+ +c++++e  +k+pfs++w+l+ll tg++lgl++s+K  glft++++++l++
  EPX74722.1 139 YGNVYFSSNSKSAAFLASVFAMFDNGLITMSRYVMIEIPTLFFMGLTSFCWMYYEnqQKNPFSLKWHLSLLSTGISLGLVISTKLSGLFTLIWLLVLAV 237
                 *********************************************************99**************************************** PP

         PMT 198 welwqllgdkslllksivkhllaralaliviPvtlylavftvhfwl 243
                 ++lw+llgd+s+++ +i+ + + +++ l+++P+++ylavftvh +l
  EPX74722.1 238 FHLWNLLGDLSVPITRIIRYGFNYVIHLVGVPMVIYLAVFTVHSEL 283
                 *******************************************976 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.15
         PMT 186 lftvllvgllliwelwqllgdkslllksivkhll 219
                 l +++ +++l+++  w++ +++ +++++    +l
  EPX74722.1 582 LTLFFALVVLFFIVRWNMGYNDEGPNVNH---YL 612
                 55677888899999999999999999954...33 PP

>> PMT_4TMC  C-terminal four TMM region of protein-O-mannosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.3       0.6   2.7e+03     140     140 ..     206     206 ..     137     246 .. 0.53
   2 ?   -2.6   0.2      0.78   3.5e+03      49      67 ..     261     279 ..     231     286 .. 0.75
   3 !  150.3  11.7   1.1e-47   4.8e-44       1     199 []     519     711 ..     519     711 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.6
    PMT_4TMC 140 l 140
                 l
  EPX74722.1 206 L 206
                 1 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.78
    PMT_4TMC  49 kqiyllGNpvlwwlstial 67 
                 + i+l+G p++++l+++++
  EPX74722.1 261 YVIHLVGVPMVIYLAVFTV 279
                 4578888888887777655 PP

  == domain 3  score: 150.3 bits;  conditional E-value: 1.1e-47
    PMT_4TMC   1 FlkkflelqkamltsnnalteshpyaSepyeWplllrgisywtkneekkqiyllGNpvlwwlstiallvfvllllalllrrqrgvkdleeeetrllnsg 99 
                 F++kf+e +k m+  ++++ + h+++S++++Wp+ll ++++ +++   +q+y++GNpv+w++ +++ l+f+l++l+ ++r+++g++d  ++ +++l+++
  EPX74722.1 519 FFEKFVEANKLMWIKDRKMGDGHEFESHALTWPFLLGPLRFLSDQ--GRQVYFFGNPVVWYSVVSLTLFFALVVLFFIVRWNMGYNDEGPNVNHYLYNI 615
                 9******************99*********************886..56***************************************8888889**** PP

    PMT_4TMC 100 lflllgwalhylPfflmgRvlflhhYlpAllfailllaalldfllkslkkslkkkklvklivvvvllvlviavFiffspltyGlpgtseevkklkwlss 198
                 + + lgw++h++P++l +  +fl+hYlpAl+f i +l++ + f+   + +    ++ v+ ++++++++l+i+v++++sp+t+ +p+t++++++l++  s
  EPX74722.1 616 GKFSLGWLIHWAPYILETDRVFLYHYLPALYFGIAALGVAWSFVGVVILE----RRPVYSFITTAFIALMIGVYYLYSPFTFMTPLTQSSCRSLELKGS 710
                 *******************************************9744433....35899***************************************9 PP

    PMT_4TMC 199 W 199
                 W
  EPX74722.1 711 W 711
                 9 PP

>> MIR  MIR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.3   0.0   1.3e-36     6e-33       2     181 ..     331     492 ..     330     497 .. 0.92

  Alignments for each domain:
  == domain 1  score: 114.3 bits;  conditional E-value: 1.3e-36
         MIR   2 yLkggdvvRLfHshqdeyltiseqqqkqevflritlypsadaanssraLWeievvqkd...awrgglikwgkvyRlkHlaTgryLaseeekksplsese 97 
                 yL         Hs++ +y++++eqq        + l ++ ++++     W+ie+ + +   + +++l+++g+++Rl+H++Tgr L+s+++  +pl+++ 
  EPX74722.1 331 YL---------HSNELVYPEGTEQQI-------VSLTDHPNQNAL----WIIEHDSPHqnnRENVELLEDGSIVRLRHIMTGRALHSHDH--RPLVSNH 407
                 55.........***************.......889999888766....****8765544588**************************9..9999999 PP

         MIR  98 ddqkevsayglegfegd.nDk..veifekksttgmksaklvprdsyvrlqHvvtgcwLhstsvklkkekfekvqqkvicakekedke 181
                 d+q evs yg  gfegd nD   v+i+e  s +  ++ ++ + ++y+rl+H+ t+c L++++ +l++++++   ++v+c++++ ++ 
  EPX74722.1 408 DWQLEVSGYGGFGFEGDgNDLfrVQILERPSRHASSNGTVEALNTYFRLIHIFTNCELMTSHRRLPDWGQN--HREVTCCRNCIERS 492
                 *****************9999**************************************************..********987765 PP

>> DUF962  Protein of unknown function (DUF962)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.4     0.066     3e+02       8      48 ..     189     233 ..     184     244 .. 0.56
   2 ?    5.8   0.0    0.0032        14      20      42 ..     260     282 ..     256     370 .. 0.90
   3 ?    4.4   0.3    0.0085        38      31      89 ..     584     689 ..     562     695 .. 0.67

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.066
      DUF962   8 yafYlaeHsnpinrllHfigvplilltvlllllrak....lklll 48 
                 + +Y ++ +np + ++H+   ++ + + l++    +    l +ll
  EPX74722.1 189 WMYYENQQKNPFSLKWHLSLLSTGISLGLVISTKLSglftLIWLL 233
                 889**************8554444433333222222121122222 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0032
      DUF962  20 nrllHfigvplilltvlllllra 42 
                 n  +H++gvp++++++++++++ 
  EPX74722.1 260 NYVIHLVGVPMVIYLAVFTVHSE 282
                 778***********999998865 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.0085
      DUF962  31 illtvlllllrak...............................................lklllalfvvgyifafvGHfvfEkrkP.Alfknplqsll 81 
                 +++++++l++                                                   +l + + ++g +  fvG +++E+r   ++++  + +l+
  EPX74722.1 584 LFFALVVLFFI-VrwnmgyndegpnvnhylynigkfslgwlihwapyiletdrvflyhylPALYFGIAALGVAWSFVGVVILERRPVySFITTAFIALM 681
                 23333333333.247788888888888888888888888888888888888888887776566666666777777899998887743478888888999 PP

      DUF962  82 idplmvll 89 
                 i+++++ +
  EPX74722.1 682 IGVYYLYS 689
                 88887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (813 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       955  (0.0532657); expected 358.6 (0.02)
Passed bias filter:                      499  (0.027832); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.72u 0.32s 00:00:01.04 Elapsed: 00:00:00.50
# Mc/sec: 4860.59
//
Query:       EPX74723.1  [L=595]
Description: cardiolipin synthase/hydrolase fusion protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-23   82.7   0.1    5.1e-23   80.9   0.0    2.0  2  Hydrolase_like   HAD-hyrolase-like
    1.3e-18   66.9   0.0    3.1e-18   65.8   0.0    1.7  1  Hydrolase_6      Haloacid dehalogenase-like hydrolase
    1.3e-15   57.9   1.0    1.3e-15   57.9   1.0    2.1  2  CDP-OH_P_transf  CDP-alcohol phosphatidyltransferase
    0.00015   22.1   0.0    0.00077   19.8   0.0    2.1  1  Hydrolase        haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> Hydrolase_like  HAD-hyrolase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       1.9   8.5e+03      33      52 ..      37      54 ..      12      62 .. 0.69
   2 !   80.9   0.0   1.1e-26   5.1e-23       2      74 ..     267     347 ..     266     348 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.9
                    THHHHHHHCT-EEEEESSSS CS
  Hydrolase_like 33 tDiagAnnaGwksvLVltGv 52
                    +D+a+A  + +++vL++ G+
      EPX74723.1 37 ADVAFA--FDIDGVLIRGGK 54
                    555555..556677777765 PP

  == domain 2  score: 80.9 bits;  conditional E-value: 1.1e-26
                     .STTSSHHHHHHHHHH---.........GGGEEEEES-TTTHHHHHHHCT-EEEEESSSSS-TTTHHHHHHHHT---SEEES CS
  Hydrolase_like   2 lgKPepemydfalevlgsd.........peevlmiGDrlatDiagAnnaGwksvLVltGvtrpedleepehkptyvaddlae 74 
                     +gKP++++yd+a + l+++         p+e++m+GD++++Di+gAn++Gw+s+LV+tG+++ +d ++p++ +++va++++e
      EPX74723.1 267 YGKPHKITYDYATNILEAKrkalnipnfPKEIFMVGDNPESDIRGANDYGWTSILVRTGIFQGAD-NSPKYPAKHVAKNVWE 347
                     7***************666666667788999**********************************.66***********987 PP

>> Hydrolase_6  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.8   0.0   6.9e-22   3.1e-18       1     100 [.      41     140 ..      41     141 .. 0.93

  Alignments for each domain:
  == domain 1  score: 65.8 bits;  conditional E-value: 6.9e-22
                  EEEESTTTSEETTEE-TTHHHHHHHHHHTT-EEEEEE---SS-HHHHHHHHHH.TT----GGGEEEHHHHHHHHHHHHSXXXEEEEESXH..HHHHHH CS
  Hydrolase_6   1 flfDidGvLwrgdkaipgaaealnalraagkpvvllTNnsskseeeyakklek.lgvditeeqvvtsataaaeylkkrkadkkvlvigee..glreel 95 
                  f+fDidGvL+rg+k + +  ++l++l+++++p++llTN+++ +e ++a++l+k l+++++e ++++s+t+++++  k    k +lv+g+    +r+ +
   EPX74723.1  41 FAFDIDGVLIRGGKGLTEGTKTLRFLQEHKIPFILLTNGGGMHETTRAERLSKlLQISLKEIDFCQSHTPFKNLKDK---YKHILVLGGSddSVRKTA 135
                  78*************************************************6658*****************99887...899999998533799999 PP

                  HHTTX CS
  Hydrolase_6  96 keagf 100
                  + +gf
   EPX74723.1 136 EMYGF 140
                  99998 PP

>> CDP-OH_P_transf  CDP-alcohol phosphatidyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.9   1.0   2.9e-19   1.3e-15       2      66 .]     402     465 ..     401     465 .. 0.92
   2 ?   -0.9   0.3      0.64   2.9e+03       6      34 ..     469     491 ..     467     572 .. 0.69

  Alignments for each domain:
  == domain 1  score: 57.9 bits;  conditional E-value: 2.9e-19
                      -HHHHHHHHHHHHHHHHHGGGS-H..HHHHHHHHHHHHHTTHHHHHHHHTT---HHHHHHHHHHH CS
  CDP-OH_P_transf   2 lPnaiTllrlllsvlailllltyyplvlailllliasltDalDGklARrlnqvstlGkllDslaD 66 
                      lPn++Tl+rl++s l ++ l++ ++  +a++l+++a++tD++DG+lAR++++ s  G +lD+laD
       EPX74723.1 402 LPNMLTLSRLFSSPLIAF-LYVNDYAKAAACLFMYAGFTDLVDGYLARKFHMRSVAGTVLDPLAD 465
                      8***********999995.5577779**************************888*********9 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.64
                      HHHHHHHHHHHHHHGGGS-H..HHHHHHH CS
  CDP-OH_P_transf   6 iTllrlllsvlailllltyyplvlailll 34 
                      +T l l+l+ ++ ++       +la l++
       EPX74723.1 469 MTCLTLCLAYQNSMPA------LLAGLII 491
                      5666666666666655......3333333 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   1.7e-07   0.00077       3     207 ..      40     313 ..      39     316 .. 0.64

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 1.7e-07
                 EEEEESBTTTBCHHHHHHHHHHHH........................CHHHHHHHHHH.......HHCHHHHHHHHHHHHH......HHHHHHHHHET CS
                 xxxxxxxxxxxxxxxxxxxxxxxx........................xxxxxxxxxxx.......xxxxxxxxxxxxxxxx......xxxxxxxxxxx RF
   Hydrolase   3 tvvfDkdGTLttgepsvedvivsa........................alalaaaletg.......sehpigkalvaaakar......sgaltgfatfi 64 
                 +++fD+dG+L++g + +++ ++ +                        a  l++ l+++         h  +k+l  ++k++        ++ + a++ 
  EPX74723.1  40 AFAFDIDGVLIRGGKGLTEGTKTLrflqehkipfilltngggmhettrAERLSKLLQISlkeidfcQSHTPFKNLKDKYKHIlvlggsDDSVRKTAEMY 138
                 689****************99999999999999999999999998888888888888888899999888888999999999988866533334444433 PP

                 TTE........HHHHTHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHTTHHHHHHHHHHTHHBHTTHH.HHHHH.HHHT.TEEEEEEESSEH....... CS
                 xxx........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxx.xxxx.xxxxxxxxxxxx....... RF
   Hydrolase  65 grg........ayaigkpewltaldippdlgaaigsaqsqgrtvallqaralavftiadplkvkpeaa.eavas.Lkaa.gievvlltgdnp....... 145
                 g+          + +g p w      ++dl++a +             + + avft  dp  v+ ++  ++v +  +++ gi ++ ++  n+       
  EPX74723.1 139 GFPsvineldvIAKRGAPFWPFTSFTESDLKKARDFDLN---------QPIEAVFTYVDP--VRFGLDlQLVMEmAQSKnGI-LGTVSETNEegpdiyf 225
                 333444555644444444443333333344444444444.........466666666666..55555544444414444466.5555555552233333 PP

                 ......HHHHHHHHHTTGGGESEEEEHHCES..........STTT.......SHHHHHHHHHHHTST..GGGEEEEESSHH.HHHHHH CS
                 ......xxxxxxxxxxxxxxxxxxxxxxxxx..........xxxx.......xxxxxxxxxxxxxxx..xxxxxxxxxxxx.xxxxxx RF
   Hydrolase 146 ......etaeraanqlGddyfdaviasdiet..........vakp.......spegkvaaireLqgk..peevamVGDgvn.Daaala 207
                        + e  + +lG+ +f+   +++ ++           +kp         ++++a+ + L+++  p+e+ mVGD++  D+ ++ 
  EPX74723.1 226 snadlvWPNEYPLPRLGQGAFASCCEKIYHEltgkqmkftkYGKPhkitydyATNILEAKRKALNIPnfPKEIFMVGDNPEsDIRGAN 313
                 333332444466666665555444444444455566667788888888888888888888888887778************9*98875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (595 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       348  (0.0194099); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 4170.70
//
Query:       EPX74724.1  [L=472]
Description: splicing factor Sap114 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.6e-57  194.2   3.5    2.6e-57  194.2   3.5    1.6  2  PRP21_like_P  Pre-mRNA splicing factor PRP21 like protein
    3.1e-35  119.9   3.1    2.2e-19   69.2   0.3    2.3  2  Surp          Surp module


Domain annotation for each model (and alignments):
>> PRP21_like_P  Pre-mRNA splicing factor PRP21 like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.38   3.4e+03     180     204 ..      72      94 ..      69     106 .. 0.62
   2 !  194.2   3.5   2.9e-61   2.6e-57       1     216 [.     205     431 ..     205     432 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.38
  PRP21_like_P 180 lDPrykeqkdklvekkskesslltd 204
                    DP yk  + kl+e+++    l ++
    EPX74724.1  72 DDPYYKYYQHKLQEARQ--GKLKAT 94 
                   69999999998744433..334444 PP

  == domain 2  score: 194.2 bits;  conditional E-value: 2.9e-61
  PRP21_like_P   1 elkdkqkileralkraewekqkekeeqkkeeeeeeeklafasiDWqdFvvvetieFdd.deleelpkPltleelkarsleqkskaleeaeaetdvem 96 
                   +++d++++l+r++ r+ew+k++e ++ k++ee+e+ek+++a+iDW+dF+vve+i+F+  de+ +l kP++l++l++++leqks+++  +++++++ +
    EPX74724.1 205 NIQDPYSVLSRIQPRVEWQKYQETQKAKRKEEQEREKIEYAQIDWNDFAVVEVIQFTGaDETTKLSKPTNLADLQTATLEQKSAMF--TMPDMNYSI 299
                   5799**********************************************************************************..********* PP

  PRP21_like_P  97 evdeeeeeeseekiekkskesavseepalakae........kkmkikadyesrlkkrknskatkekkka........kcpitgeliPedeleeHmri 177
                   e++ ++  ++e   +  + e+ v  + +l++++           +  a + +    + +++++   +ka        ++p+tge+iP++e+ eHmr+
    EPX74724.1 300 EEAPPTSAAWEPLNAPAKAEFGVAMPSSLPSQRtsaetspsPATQPSAMGAPPPLRSAKPTKSV--PKAfqrhvpmeRSPFTGEMIPASEMGEHMRV 394
                   ***************9999999999999999887766666655555555555444443333333..33355777889******************** PP

  PRP21_like_P 178 eLlDPrykeqkdklvekkskesslltddevaenlkrlak 216
                    LlDPr++eq++  +e++++++ +l++ +va+n+krl++
    EPX74724.1 395 HLLDPRWREQRK--IEESRRSTLNLENVDVAANMKRLVS 431
                   ************..89*********************97 PP

>> Surp  Surp module
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.2   0.3   2.4e-23   2.2e-19       1      52 [.      35      85 ..      35      86 .. 0.96
   2 !   51.3   0.2   9.7e-18   8.7e-14       2      53 .]     137     187 ..     136     187 .. 0.94

  Alignments for each domain:
  == domain 1  score: 69.2 bits;  conditional E-value: 2.4e-23
                HHHHHHHHHHHTT-S.SHHHHHHHH.T--TTSGGGSTT.STTHHHHHHHHHH CS
        Surp  1 leiIkktAqfVarnGkeFeqklrerernnpqFaFLkdpdhpyhayYrwrvde 52
                +eiI+k A +VarnG +Fe+k+r++e +np+F+FL+ + +py++yY+++++e
  EPX74724.1 35 REIIDKSAGYVARNGLAFEEKIRQNEIKNPKFSFLQVD-DPYYKYYQHKLQE 85
                79*********************************777.***********97 PP

  == domain 2  score: 51.3 bits;  conditional E-value: 9.7e-18
                 HHHHHHHHHHTT-S.SHHHHHHHH.T--TTSGGGSTT.STTHHHHHHHHHHH CS
        Surp   2 eiIkktAqfVarnGkeFeqklrerernnpqFaFLkdpdhpyhayYrwrvdey 53 
                 ++  +tA++ a  G+ F +kl ++e++n+qF+FL+++ h++++y+++ v++y
  EPX74724.1 137 NVLRLTARYAAIRGPTFIAKLSQKEWGNTQFDFLHQN-HALYPYFTRIVQQY 187
                 67889*****************************666.*************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (472 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       853  (0.0475766); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 3321.82
//
Query:       EPX74725.1  [L=386]
Description: diacylglycerol cholinephosphotransferase/diacylglycerol ethanolaminesphotransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      1e-16   61.4   0.1      1e-16   61.4   0.1    3.1  2  CDP-OH_P_transf  CDP-alcohol phosphatidyltransferase


Domain annotation for each model (and alignments):
>> CDP-OH_P_transf  CDP-alcohol phosphatidyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.4   0.1   5.7e-21     1e-16       1      66 []      45     121 ..      45     121 .. 0.96
   2 ?   -4.8   6.4         1   1.8e+04      36      36 ..     236     236 ..     135     340 .. 0.63

  Alignments for each domain:
  == domain 1  score: 61.4 bits;  conditional E-value: 5.7e-21
                      S-HHHHHHHHHHHHHHHHHGGGS-H..............HHHHHHHHHHHHHTTHHHHHHHHTT---HHHHHHHHHHH CS
  CDP-OH_P_transf   1 nlPnaiTllrlllsvlailllltyyp............lvlailllliasltDalDGklARrlnqvstlGkllDslaD 66 
                      ++Pn+iTl++l ++ ++++++l+y++              +a+ l+l++s+ Da+DG +ARr+n++s lG+l+D+++D
       EPX74725.1  45 MAPNLITLTGLGFVTVNVITMLVYKYgyetdgypgwvyASWAVGLFLYQSF-DAIDGSQARRTNSSSPLGQLFDHGVD 121
                      69****************99999999***********99************.*************778********99 PP

  == domain 2  score: -4.8 bits;  conditional E-value: 1
                      H CS
  CDP-OH_P_transf  36 i 36 
                      +
       EPX74725.1 236 F 236
                      1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (386 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       570  (0.0317921); expected 358.6 (0.02)
Passed bias filter:                      311  (0.0173462); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 2538.41
//
Query:       EPX74726.1  [L=580]
Description: dihydroxyacetone kinase Dak1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.6e-104  349.2   2.2   2.3e-104  348.7   2.2    1.2  1  Dak1      Dak1 domain
      4e-48  163.6   0.6    6.8e-48  162.8   0.6    1.4  1  Dak2      DAK2 domain
  ------ inclusion threshold ------
       0.14   12.4   0.1       0.44   10.8   0.1    1.8  1  Hpt       Hpt domain


Domain annotation for each model (and alignments):
>> Dak1  Dak1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  348.7   2.2  3.8e-108  2.3e-104       2     299 ..      19     327 ..      18     347 .. 0.92

  Alignments for each domain:
  == domain 1  score: 348.7 bits;  conditional E-value: 3.8e-108
                 HHHHH-TTEEEETTTTEEEETT-S-TTS-EEEEEEEESSTTTTGGGBSBTSBSEEEEEEETS---HHHHHHHHHHH--SS-EEEEEESSHHHHHHHHHH CS
        Dak1   2 GlvaanpelklleeekvvvrkkekkkgkValisgGGSGHePahagfVGkgmldaavaGevFaSPsakqilaaikavdsgkGvllivkNYtGDvlnfglA 100
                 +l++ n++l+++ee k+++ + e +k++V++isgGG+GHeP+h+ fVGkgml+a+++G++FaSPs+kqi a ik+v+s++G+l+i+kNYtGDvl+f +A
  EPX74726.1  19 ALASLNKTLSVHEEGKFIYFH-EYNKNNVSVISGGGAGHEPTHSSFVGKGMLNATICGSIFASPSSKQINAGIKQVKSDAGTLVICKNYTGDVLHFAMA 116
                 57888999***********94.5579************************************************************************* PP

                 HHHHHHTT--EEEEEE--B-SSS.SSTTCSSSB--THHHHHHHHHHHHHHHT--HHHHHHHHHHHHTTEEEEEEEEE--B-TTTSSBSS-..--TTEEE CS
        Dak1 101 aekakaegikvetvvvdDDvave.dseekagrRGvagtvlveKiaGaaAeegasLeevaelaekvaenlrsigvalsactvpgagkpsfe..laedeie 196
                 +ek +a g k+e + v+DDv+v+ +++ k+grRG+agtvl++KiaGaaA++g  Le++++l++++++n++si ++l +++vpg+g ++ +  +a+de+e
  EPX74726.1 117 VEKERAAGRKAELIAVGDDVSVGrAKSGKVGRRGLAGTVLIHKIAGAAASHGVGLEDLVKLCHTANDNMVSINASLAHVHVPGQGPRDDDesMAHDEME 215
                 **********************999***********************************************************97665556******* PP

                 ETE-TTS---SEEEE---H.HHHHHHHHHHHHH............TT-EEEEEEEE-BSS-HHHHHHHHHHHHHHHHHT.T-EEEEEEEESSS--TTBE CS
        Dak1 197 lGlGiHgEpGvervklksa.delveelleklledke.......lkkgdevvllvNglGgtsllelyivarevaelleek.gikvvrvlvGeyvTsldma 286
                 lG+GiH+EpG++r+++ ++ d+lv+e+l++ll++++        +++devvl++N+lGg+slle+++v ++v+e+l+e+ +i++vrv++G ++Tsl++ 
  EPX74726.1 216 LGMGIHNEPGCRRISPIPSiDDLVSEMLKQLLDQSDkdrayvnINSEDEVVLVMNNLGGLSLLEFSAVSSKVEEALAEQySIRPVRVYAGIFTTSLNGL 314
                 *************998875277**********84443366666556********************************99******************* PP

                 EEEEEEEEE-HHH CS
        Dak1 287 Gfsitllklddel 299
                 Gf itl++++d++
  EPX74726.1 315 GFGITLFRTTDHI 327
                 ********98544 PP

>> Dak2  DAK2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  162.8   0.6   1.1e-51   6.8e-48       2     173 ..     411     579 ..     410     580 .] 0.95

  Alignments for each domain:
  == domain 1  score: 162.8 bits;  conditional E-value: 1.1e-51
                 TS-S-HHHHHHHHHHHHHHHHHC-.--SSHHHHHHHHHHHHHHH--STHHHHHHHHHHHHHHHC.........TT---HHHHHHHHHHHHHHHH---TT CS
        Dak2   2 vGDGDtGtnmargaeavlkaleel.eeaslaevlkalakallsgagGtsGvlysqflralakalke.kee...ldaedlaaalkaaleaiqavgkarpg 95 
                 +GDGD+Gt+++rgae v++ ++++  ++++ ++++++a+++++++ GtsG+ly++f++++ak +k+  +e   ++++ +++al+ al+++ ++++arpg
  EPX74726.1 411 AGDGDCGTTLKRGAEGVAEFVKSDkFSDDPIRLVRDIADVIEDNMDGTSGALYAIFFHGFAKGVKDhLQEtkdISTKMWSNALNVALNTLFKYTPARPG 509
                 8***********************9999************************************8853335779************************* PP

                 SSSTHHHHHHHHHHHHT...........T---HHHHHHHHHHCCS---SSGGGGGGGGGTTS--HHHHHHHHHHHHHH CS
        Dak2  96 dkTmlDvlrpavealekakdgedlkealekaakaaekgaeaTkellaklgrAsylgerslgvvDpGAvglalileala 173
                 d+Tm+D+l+p+ve++ +++d       +++a kaa++gae+T+ l+aklgrA y+g   + v+D+GA g+a+i+e++a
  EPX74726.1 510 DRTMCDALVPFVEKFVETDD-------IHAASKAARDGAENTAYLQAKLGRAVYVGGDVK-VPDAGALGVAAIVEGFA 579
                 *******************9.......*****************************9765.***************97 PP

>> Hpt  Hpt domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.1   7.4e-05      0.44      32      57 ..     156     183 ..     153     205 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 7.4e-05
                 HHHHHHHHHHH..TTBHHHHHHHHHHHH CS
         Hpt  32 aaHtLKGsagm..lGltelaelahelEd 57 
                 + H+++G+a++  +Gl++l +l+h+  d
  EPX74726.1 156 LIHKIAGAAAShgVGLEDLVKLCHTAND 183
                 58*********4455*********9887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (580 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       440  (0.0245412); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.30s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 3926.38
//
Query:       EPX74727.1  [L=198]
Description: pig-P subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-34  117.8   4.6    4.1e-34  117.1   4.6    1.3  1  PIG-P     PIG-P
  ------ inclusion threshold ------
      0.036   14.4   6.9      0.057   13.7   6.9    1.3  1  DPM2      Dolichol phosphate-mannose biosynthesis regulatory 
          8    6.5   7.8       0.74    9.8   0.3    2.2  2  DUF485    Protein of unknown function, DUF485


Domain annotation for each model (and alignments):
>> PIG-P  PIG-P
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.1   4.6   6.8e-38   4.1e-34       1     121 []      81     192 ..      81     192 .. 0.98

  Alignments for each domain:
  == domain 1  score: 117.1 bits;  conditional E-value: 6.8e-38
       PIG-P   1 treyygFvlyllstlafllyllwallPeevlhalgityypnryWalavpayllmlvlyiyvalaslnlevltppldsletivDeaakveeeeeeeelke 99 
                 t+eyygFvlyl+s++af l+++wa+lP++++++l i+ y +r+Wala+p+++l+l++yi val+++n+evlt pl+sle++vD++++         + e
  EPX74727.1  81 TYEYYGFVLYLVSMVAFGLFICWAILPASAVNYLEIQSYLSRWWALAIPSWILVLIIYIHVALTAYNTEVLTRPLNSLEYLVDQYSQ---------VGE 170
                 79************************************************************************************7.........899 PP

       PIG-P 100 yaseetdavmDlpigeVnevlY 121
                 + + +   v+Dl + +Vn+  Y
  EPX74727.1 171 EDRAACGRVVDLRLCDVNRQRY 192
                 99****************9876 PP

>> DPM2  Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   6.9   9.5e-06     0.057       6      62 ..      86     141 ..      82     154 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 9.5e-06
        DPM2   6 GlllllvalllfvYYtiwvillPfvdedhvlhkyflpreyairipvillvvlllfvg 62 
                 G++l lv+++ f  +  w+il     +   +++y l+r +a+ ip+ +lv+++ + +
  EPX74727.1  86 GFVLYLVSMVAFGLFICWAILPASAVNYLEIQSY-LSRWWALAIPSWILVLIIYIHV 141
                 99*****************986666666778887.79*********99998876544 PP

>> DUF485  Protein of unknown function, DUF485
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   2.4       0.2   1.2e+03      16      34 ..      85     103 ..      79     118 .. 0.66
   2 ?    9.8   0.3   0.00012      0.74      10      47 ..     120     156 ..     112     160 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.2
      DUF485  16 fafpltaiflvvYfgfvll 34 
                 ++f+l ++ +v++ +f+  
  EPX74727.1  85 YGFVLYLVSMVAFGLFICW 103
                 4455555555555555543 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00012
      DUF485  10 vrkrrrfafpltaiflvvYfgfvllvafapdllatkvg 47 
                  ++ +++a+p ++++l++Y+  v+l+a++ ++l++++ 
  EPX74727.1 120 LSRWWALAIPSWILVLIIYI-HVALTAYNTEVLTRPLN 156
                 5677889999999*999997.6999*********9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       746  (0.0416086); expected 358.6 (0.02)
Passed bias filter:                      445  (0.0248201); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1400.92
//
Query:       EPX74728.1  [L=239]
Description: exosome subunit Rrp40 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-12   47.0   0.0      5e-12   46.0   0.0    1.5  1  KH_6      KH domain
  ------ inclusion threshold ------
      0.025   14.5   0.0      0.048   13.6   0.0    1.4  1  Rrp40_N   Exosome complex exonuclease Rrp40 N-terminal domain
      0.089   13.0   0.0       0.16   12.1   0.0    1.4  1  CGGC      CGGC domain


Domain annotation for each model (and alignments):
>> KH_6  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.0   0.0   8.4e-16     5e-12       1      44 [.     159     206 ..     159     207 .. 0.94

  Alignments for each domain:
  == domain 1  score: 46.0 bits;  conditional E-value: 8.4e-16
        KH_6   1 Gmlfe.VslslvrRll...nhvLeeLgkagpfeiavGlNGriWvkses 44 
                 G++++  sls +r+ll   n +L++Lg+ +pfeiavG+NGr+W +se+
  EPX74728.1 159 GYMITgLSLSHCRKLLspqNALLQTLGTYIPFEIAVGMNGRVWAHSET 206
                 7888889************************************99876 PP

>> Rrp40_N  Exosome complex exonuclease Rrp40 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0     8e-06     0.048       8      48 .]      29      70 ..      24      70 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 8e-06
     Rrp40_N  8 lkLGPGLrhtP..plstliatraGiLhtkpkkqalwiEsnskR 48
                ++LGPGL h    + +++  +r G Lh+   k+++ +++ +kR
  EPX74728.1 29 VRLGPGLVHQKhdHEDEIKVSRPGFLHQ-GVKNTVLVDTRMKR 70
                9******7766333355*********84.56677778888877 PP

>> CGGC  CGGC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   2.7e-05      0.16      16      94 ..     139     237 ..     132     239 .] 0.83

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.7e-05
        CGGC  16 gvkClkalkerkgaFeeyeeevelvgfvtCggC.....pgkkvveklkelk................kegvdvihlssCiktkkakkeCpeieeikeai 93 
                   +Cl+a + ++g F e++e   ++g+   + C     p++ +++ l  ++                ++ +++i +s+Cik+++  ++ ++ie +k+++
  EPX74728.1 139 ELECLDATTGKAGGFGELKEGYMITGLSLSH-CrkllsPQNALLQTLGTYIpfeiavgmngrvwahsETIPTTILISNCIKQSEFLNDDEQIELVKSMV 236
                 579*****************99999996665.9888998888888888888999999999999999888899********6666666666666666666 PP

        CGGC  94 e 94 
                 +
  EPX74728.1 237 K 237
                 5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       323  (0.0180155); expected 358.6 (0.02)
Passed bias filter:                      315  (0.0175693); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1700.57
//
Query:       EPX74729.1  [L=309]
Description: hypothetical protein SOCG_02211 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.5e-14   52.2   1.1    1.3e-13   50.7   1.1    1.9  1  BSD       BSD domain
  ------ inclusion threshold ------
       0.12   12.7   2.9        1.8    8.9   0.1    2.5  2  IlvC      Acetohydroxy acid isomeroreductase, catalytic domai
        0.7   10.7  10.5        1.2    9.9   9.3    2.0  1  MRP-L46   39S mitochondrial ribosomal protein L46


Domain annotation for each model (and alignments):
>> BSD  BSD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.7   1.1   2.2e-17   1.3e-13       1      47 [.     165     211 ..     165     215 .. 0.96

  Alignments for each domain:
  == domain 1  score: 50.7 bits;  conditional E-value: 2.2e-17
         BSD   1 wdnkfkld.kteeiaqsllkedpeLrklynelVPskvseeqFWsrYfy 47 
                 w+++ ++d kt+ei+++l + +++Lr+ ++elVPs+vs+e FW+r+f 
  EPX74729.1 165 WEKGISIDsKTDEISALLQT-YENLRNQMEELVPSQVSYEAFWKRFFW 211
                 89999***************.**************************5 PP

>> IlvC  Acetohydroxy acid isomeroreductase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.1    0.0003       1.8      73     133 ..      14      68 ..       4      76 .. 0.76
   2 ?    3.7   0.1     0.011        67      56     126 ..     157     227 ..     143     238 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0003
                 HHHHHHHHHHHS-HHHHHHHHHHHHHHHTTHHHHHHHHHHHTTSHHHHHHHHHHHTSHHHH CS
        IlvC  73 eygdltagprviteevkeemkeileeiqsGefakevieenkagrpelkklrkeeaeheiek 133
                 e ++++      +e+ keem + l++i  G+f   + + +++ +  + + r e a++ + +
  EPX74729.1  14 EEQNEEG-----YEKLKEEMGSALDSITGGKFGPFWSKFKEKSESFMGDTR-ERANTGMSN 68 
                 4444444.....4566**********************9999999999998.666666655 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.011
                 HHHHHHHHHHHHS-HHHHHHHHHHHHHHS-HHHHHHHHHHH.HHHHTTHHHHHHHHHHHTTSHHHHHHHHHH CS
        IlvC  56 iyegGiakmresiSdtaeygdltagprviteevkeemkeil.eeiqsGefakevieenkagrpelkklrkee 126
                 ++++G +   + iS  ++  + +a  ++ +e+ +++m+e++ ++++   f k++   +++ +++l+++++ee
  EPX74729.1 157 VSDEGYNDWEKGISIDSKTDEISALLQT-YENLRNQMEELVpSQVSYEAFWKRFFWYKEQPTKSLSSMHTEE 227
                 6778888889999999999999999999.9*********85389999******9999999999999998554 PP

>> MRP-L46  39S mitochondrial ribosomal protein L46
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   9.3   0.00019       1.2      25     119 .]     201     294 ..     192     294 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00019
                 HH....HHHHHHHHH..HT----HHHHTTHHHH.HHHHHHH---------.....----HHHHHHHHHHHHHHS..............----S-SSTT CS
     MRP-L46  25 efYkYqkellerlel..efskyfyfkkgtlael.kfkelkkklterdeevardigkpdlrqererndeqeikspksyeealeedarvikpasRvTeaD 119
                 ++    +  ++r+ +  e + ++ +   t +e  ++ ++k+++ e+d++++++ gk+++ ++ +++ ++e ++++s + +++ +++++++++  Te D
  EPX74729.1 201 SY----EAFWKRFFWykEQPTKSLSSMHTEEEIfSWDDEKSDIEEEDDDKKTNGGKEEVSKDNKEELDSEQNKKNSTSTSANHVDEKVTAEPSLTERD 294
                 56....6778888875567888889999999****************************999998888888888888888888889999999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (309 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1798  (0.100284); expected 358.6 (0.02)
Passed bias filter:                      511  (0.0285013); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.29s 00:00:00.85 Elapsed: 00:00:00.46
# Mc/sec: 2039.94
//
Query:       EPX74730.1  [L=660]
Description: heat shock protein BiP [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   4.2e-262  870.7   9.3   4.8e-262  870.5   9.3    1.0  1  HSP70           Hsp70 protein
    2.1e-21   76.1   0.3    5.9e-20   71.3   0.1    2.1  2  MreB_Mbl        MreB/Mbl protein
  ------ inclusion threshold ------
      0.027   13.8   3.0        0.3   10.3   0.2    2.9  3  Hydantoinase_A  Hydantoinase/oxoprolinase
      0.041   14.3   5.3        3.2    8.2   0.1    3.1  3  FtsA            Cell division protein FtsA
       0.27   12.1   1.3        2.3    9.1   0.0    2.7  2  DUF4845         Domain of unknown function (DUF4845)


Domain annotation for each model (and alignments):
>> HSP70  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  870.5   9.3  1.4e-265  4.8e-262       1     598 [.      38     642 ..      38     643 .. 0.99

  Alignments for each domain:
  == domain 1  score: 870.5 bits;  conditional E-value: 1.4e-265
                 EEEEEEXSSEEEEEEEETTEEEEEXXTTSXSSEESEEEEXTTSEEETHHHHHCTTTTGGGEEEXGGGTTTXBTTSHHHHHHHTTXSSEEEEETTSBEEE CS
       HSP70   1 viGiDLGttnsvvavmeggkievianeegnrttPsvvaFtkkerlvGeaAkrqavtnpkntvfsvKrliGrkfsdpevqkeikelpykvvkkengkavv 99 
                 viGiDLGtt+s+vavm++g++e+ian++g+r+tPs+v+Ft++erlvGeaAk+qa  np+ntvf++KrliGrkf++++++++ik+lp+++v++ ++++ v
  EPX74730.1  38 VIGIDLGTTYSCVAVMKNGRVEIIANDQGSRITPSYVGFTDEERLVGEAAKNQAPANPENTVFDIKRLIGRKFDEKTMTRDIKSLPFNIVNN-KNRPLV 135
                 79*****************************************************************************************9.999*** PP

                 EEEETTE..EEEHHHHHHHHHHHHHHHHHHHHTSBEEEEEEEEXTTXXHHHHHHHHHHHHHTTXEEEEEEEHHHHHHHHHHTCCSSSCEEEEEEEEXSS CS
       HSP70 100 eveaage..kftpeqisamvLkklketaeaylgkkvtdavitvPaYfndaqRqatkdAgkiAGLnvlRivNepTAaalaYGldkkdkernvlvyDlGgg 196
                 ev++ g+  +ftpe+isam+L k+k+tae+ylg++vt+av+tvPaYfndaqRqatkdAg+iAGLnv+RivNepTAaa+aYGldk+d+e++++vyDlGgg
  EPX74730.1 136 EVKYGGKtkEFTPEEISAMILGKMKQTAETYLGHPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDSEKHIIVYDLGGG 234
                 ******999****************************************************************************************** PP

                 XEEEEEEEEETTEEEEEEEEEETTXSHHHHHHHHHHHHHHHHHHHHSXXGGGSHHHHHHHHHHHHHHHHHTTTSSCSEEEEEEEEEETTTEEEEEEEEH CS
       HSP70 197 tfdvSilelekGvfevkaTagDthlGGedfDealvehlveefkkkegidlskdkkalqrlkeaaekaKkeLSsskqteinleietvdedgkdlseklsR 295
                 tfdvS+l++++Gvfev+aT+gDthlGGedfD++++++l++ +++k+++d++kd ka+ +lk+++ekaK++LSs  q+++++ei+++++ gkd+se+lsR
  EPX74730.1 235 TFDVSLLSIDNGVFEVLATSGDTHLGGEDFDNKIINYLARLYNRKNNVDVTKDAKAMGKLKREVEKAKRTLSS--QKSARIEIDSFHD-GKDFSETLSR 330
                 *************************************************************************..99*********99.********** PP

                 HHHHHHHHHHHHHTHHHHHHHHHHCTEEGGGCSEEEEESGGGGSHHHHHHHHHHTTCHHBSSSHTTTHHHHHHHHHHHHHCTCGCSHCCEEEEBESS-E CS
       HSP70 296 akfeelvedllertlepvekalkdaklkkeeidevvlvGGstRiPkvqelvkelfgkepsktvnpDeavaiGAAvqagvlsgeeevkdllllDvtpLsl 394
                 akfeel++dl++rtl+pve++lkd++lkk+e+d++vlvGGstRiPkvqel++++fgk+ sk++npDeava+GAAvqagvlsgee  ++++llDv+pL+l
  EPX74730.1 331 AKFEELNMDLFKRTLKPVEQVLKDSGLKKSEVDDIVLVGGSTRIPKVQELLESYFGKKSSKGINPDEAVAYGAAVQAGVLSGEEGSDNIVLLDVIPLTL 429
                 *************************************************************************************************** PP

                 EEEETTTEEEEEESTTCBSSEEEEEEEEESSTTSSSEEEEEEESSSSBGGGSEEEEEEEEECESSCSTTCSEEEEEEEEETTSCEEEEEEET.TTCCEE CS
       HSP70 395 gietlggvmtkliernttiptkksqvfstaadnqtaveievlqgerelvkdnkllgsfeldgippaprGvpqieVtfdidanGiltvsakdk.etgkee 492
                 giet+ggvmt+li+rn  ipt+ksq+fsta+dnq++v i+v++ger+l+kdn+llg+f+l+gippaprGvpqieVtf++danG+ltvsa dk ++gk e
  EPX74730.1 430 GIETTGGVMTHLIRRNSPIPTRKSQIFSTASDNQNTVLIQVFEGERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSALDKsGKGKPE 528
                 ********************************************************************************************889**** PP

                 EEEEECCSS.SBHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH...GGGSTHHHH....HHHHHHHHHHHCHTTSSCHHHHHHHH CS
       HSP70 493 eitieaseg.lseeeiekmvkdaeesaeedkkkkeaieakneaeelvyslekkleee...aekvseaek....ekvesaieeLkeeleeeekeeieakt 583
                 ++ i++++g lsee+ie+mvk+ae+++eedk  ke+iea+n +e++vysl+++++++   + kvse++k    ++ve+ ie+L+ e++e++kee+ +++
  EPX74730.1 529 KLVIKNDKGrLSEEDIERMVKEAEQYSEEDKILKERIEARNGLENYVYSLKTQFTDKeqfGGKVSEEDKqtvlDTVEDVIEWLEVEGAEASKEELDDQR 627
                 *********9********************************************9997888999999998999999*********************** PP

                 HHHHHHHHHHHHHHH CS
       HSP70 584 eelkkvvekiaekly 598
                 ++++++v++i++kly
  EPX74730.1 628 QKVDQAVHPITQKLY 642
                 ************998 PP

>> MreB_Mbl  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0     0.012        43       3      23 ..      38      58 ..      36      95 .. 0.82
   2 !   71.3   0.1   1.7e-23   5.9e-20      90     316 ..     168     404 ..     144     411 .. 0.83

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.012
                EEEEEE-SSEEEEEETTTEEE CS
    MreB_Mbl  3 dlgiDLGtantlvyvkgkgiv 23
                 +giDLGt+   v v  +g v
  EPX74730.1 38 VIGIDLGTTYSCVAVMKNGRV 58
                59*********9999888755 PP

  == domain 2  score: 71.3 bits;  conditional E-value: 1.7e-23
                 -SS--EEEEEE-SS--HHHHHHHHHHHHHTT-SEEEEEEHHHHHHHHTT--TTSSS-EEEE.EE-SS-EEEEEEETTEEE.....EEEEES-SHHHHHH CS
    MreB_Mbl  90 slskprvvicvPsgiteverrAvkeaakkaGarevllieeplaAAiGaglpveepsgnmvv.diGggttevavislggiv.....tsksvrvaGdelde 182
                   + ++ v++vP   ++ +r+A k+a + aG + + +++ep aAAi  gl+ ++++ +++v d+Gggt +v+++s+ + v     ts   +++G+++d+
  EPX74730.1 168 GHPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDSEKHIIVyDLGGGTFDVSLLSIDNGVfevlaTSGDTHLGGEDFDN 266
                 3466789*********************************************9999998766*************9764422222567799******** PP

                 HHHHHHHHHHS....EE--H..HHHHHHHHHH-BSS--HHHH.EEEEEEEETTTTCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHHHHH CS
    MreB_Mbl 183 aiikyirkkyn....lliGe..rtaekikieigsavkeeeee.kmeikGrdlvtglpkevevsseevrealkepvsaiveavkevLektppeLaadivd 274
                 +ii+y+ + yn    + + +  +   k+k e+ +a+ + +++ + +i+      g   + ++s ++ +e   + +++ ++ v++vL++    L +  vd
  EPX74730.1 267 KIINYLARLYNrknnVDVTKdaKAMGKLKREVEKAKRTLSSQkSARIEIDSFHDGKDFSETLSRAKFEELNMDLFKRTLKPVEQVLKDSG--LKKSEVD 363
                 ******887753322445441155678999***9998876665899999999**********************************9865..6666666 PP

                 H-EEEESGGGGSBTHHHHHHHHHSS-EEE-SSTTTHHHHHHH CS
    MreB_Mbl 275 rgivltGGgallkgldkllseetglpvkvaedpltcvakGtg 316
                   ivl+GG++ +  +++ll++ +g + + + +p ++va G++
  EPX74730.1 364 -DIVLVGGSTRIPKVQELLESYFGKKSSKGINPDEAVAYGAA 404
                 .59999**********************************86 PP

>> Hydantoinase_A  Hydantoinase/oxoprolinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.1     0.022        79      74     105 ..      31      62 ..      22      72 .. 0.84
   2 ?   10.3   0.2   8.3e-05       0.3      62      97 ..     208     242 ..     192     258 .. 0.78
   3 ?   -1.3   0.0      0.29     1e+03     226     252 ..     345     371 ..     285     405 .. 0.69

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.022
  Hydantoinase_A  74 klagekkvItfDmGGTstDvslikdgevevsl 105
                     +++++  vI++D+G T   v+++k+g+ve+  
      EPX74730.1  31 ETENYGTVIGIDLGTTYSCVAVMKNGRVEIIA 62 
                     6778889*********************9865 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 8.3e-05
  Hydantoinase_A  62 PaaGvvgaaatsklagekkvItfDmGGTstDvslik 97 
                     P a ++++    k++ ek++I++D+GG ++Dvsl++
      EPX74730.1 208 PTAAAIAYGL-DKTDSEKHIIVYDLGGGTFDVSLLS 242
                     5566665555.789999***************9865 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 0.29
  Hydantoinase_A 226 anavrklsvergldpkeltlvvfGGaG 252
                      ++v++++++ gl+++e+  +v  G++
      EPX74730.1 345 LKPVEQVLKDSGLKKSEVDDIVLVGGS 371
                     467888889999999988776665554 PP

>> FtsA  Cell division protein FtsA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.1    0.0009       3.2       1      28 [.      39      63 ..      39     112 .. 0.85
   2 ?    7.2   0.2    0.0018       6.5       4      96 ..     230     395 ..     227     406 .. 0.61
   3 ?   -2.3   0.0       1.6   5.9e+03      37      52 ..     544     559 ..     531     628 .. 0.64

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0009
                EEEEE-SSSEEEEEEETTEEEEEEEES- CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        FtsA  1 alvDiGagktdvavaedgalvhlrvigv 28
                +++D+G++ ++vav+++g    +++i  
  EPX74730.1 39 IGIDLGTTYSCVAVMKNG---RVEIIAN 63
                58***************9...5555554 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0018
                 EE-SSSEEEEEEETTEEEEEEEES-......-HHHHHHH......................HHHHHT--HHHHHHHHHHH--S--........EEEEEH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxx......................xxxxxxxxxxxxxxxxxxxxxxxx........xxxxxx RF
        FtsA   4 DiGagktdvavaedgalvhlrvigv......ggngitkd......................iakalrtaveeAerikikyGsala........ekeigr 66 
                 D+G+g+ dv++++ ++ v ++v+ +      gg+ +++                       ++  l+  ve+A+r      s  +              
  EPX74730.1 230 DLGGGTFDVSLLSIDNGV-FEVLATsgdthlGGEDFDNKiinylarlynrknnvdvtkdakAMGKLKREVEKAKRTLS---S-QKsarieidsF----- 318
                 888888888888885433.44444444455566666666444433333333333333335555555666666666661...1.11233344550..... PP

                 HHHH..................................................GGGGSTTHHHHHHHHH.....T-..HHHT-G CS
                 xxxx..................................................xxxxxxxxxxxxxxxx.....xxxxxxxxxx RF
        FtsA  67 kels..................................................ggsalpnleelaeral.....spkleevsdp 96 
                    +                                                  g++ +p+++el+e+ +     +       +p
  EPX74730.1 319 ---HdgkdfsetlsrakfeelnmdlfkrtlkpveqvlkdsglkksevddivlvgGSTRIPKVQELLESYFgkkssK-----GINP 395
                 ...155555555556666688888999999999999999999999999999**9*************998543320.....3333 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 1.6
                 HHHHHT--HHHHHHHH CS
                 xxxxxxxxxxxxxxxx RF
        FtsA  37 iakalrtaveeAerik 52 
                 i++++++a +  e+ k
  EPX74730.1 544 IERMVKEAEQYSEEDK 559
                 4444444444444444 PP

>> DUF4845  Domain of unknown function (DUF4845)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.0   0.00064       2.3      14      73 ..      81     143 ..      68     151 .. 0.79
   2 ?    0.5   0.3      0.32   1.1e+03       9      48 ..     281     320 ..     279     333 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00064
     DUF4845  14 kalksl..ekesglegmsvaeirsaldkrldinni.rsikgedleiekegggvvvslkYevri 73 
                 + + ++  ++ +++++++v +i++ + +++d   + r+ik+  + i+ ++++  v++kY  ++
  EPX74730.1  81 RLVGEAakNQAPANPENTVFDIKRLIGRKFDEKTMtRDIKSLPFNIVNNKNRPLVEVKYGGKT 143
                 44444433568999*******************555***********************7665 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.32
     DUF4845   9 yysikkalkslekesglegmsvaeirsaldkrldinnirs 48 
                 ++ ++k  k++ k +++ ++ ++++ s+ + r++i+++++
  EPX74730.1 281 NVDVTKDAKAMGKLKREVEKAKRTLSSQKSARIEIDSFHD 320
                 567889999999999999999999****9******99965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (660 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1234  (0.068827); expected 358.6 (0.02)
Passed bias filter:                      741  (0.0413297); expected 358.6 (0.02)
Passed Vit filter:                        75  (0.00418317); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.70u 0.33s 00:00:01.03 Elapsed: 00:00:00.47
# Mc/sec: 4241.19
//
Query:       EPX74731.1  [L=493]
Description: ATP-citrate synthase subunit 2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.7e-83  276.2   0.0      1e-81  272.7   0.0    2.1  2  Citrate_bind  ATP citrate lyase citrate-binding
    1.3e-10   41.2   0.0    2.2e-10   40.4   0.0    1.3  1  ATP-grasp_2   ATP-grasp domain


Domain annotation for each model (and alignments):
>> Citrate_bind  ATP citrate lyase citrate-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0     0.026   2.3e+02      34      65 ..     237     268 ..     226     276 .. 0.82
   2 !  272.7   0.0   1.1e-85     1e-81       1     177 [.     305     482 ..     305     483 .. 0.99

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.026
  Citrate_bind  34 tlvaGGGasvvyaDtiadlglaselanYgeys 65 
                    l +G Ga v y D  a+l+ + ++ + ++++
    EPX74731.1 237 ILPSGSGANVHYLDLAAKLDQTADFECGAKWA 268
                   5779**************99999888777765 PP

  == domain 2  score: 272.7 bits;  conditional E-value: 1.1e-85
  Citrate_bind   1 relskeeayiaeldaktgaslKltvlnpkgriwtlvaGGGasvvyaDtiadlglaselanYgeysGapseeqtyeyaktildlmtre.krpdgkvli 96 
                   r+lskeeay++eldaktgaslKlt++np+gr+w lvaGGGasvvyaD++a +g+a+elanYgeysGap++ qty+yakt+ldlmtr  +r dgk+l+
    EPX74731.1 305 RDLSKEEAYVQELDAKTGASLKLTIMNPNGRVWNLVAGGGASVVYADAVAVNGAADELANYGEYSGAPTDGQTYQYAKTVLDLMTRGkPRADGKILF 401
                   6889**********************************************************************************989******** PP

  Citrate_bind  97 iGggianftnvaatfkgiiraleelksklkehkvkiyvrrggpnyqeglkamkelgeelglpikvfgpethitaivklalg 177
                   iGggianft  a tf++i ral e+k+kl ehkv+i+vrr+gpnyqegl+ ++e+ge+ +lp+kv+gpe+hi++iv++ lg
    EPX74731.1 402 IGGGIANFTSPAVTFRAISRALGEFKDKLLEHKVSIWVRRAGPNYQEGLRVIREAGEKYNLPLKVYGPECHISGIVPMGLG 482
                   ******************************************************************************998 PP

>> ATP-grasp_2  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.4   0.0   2.5e-14   2.2e-10      30     202 .]      71     237 ..      54     237 .. 0.83

  Alignments for each domain:
  == domain 1  score: 40.4 bits;  conditional E-value: 2.5e-14
                  HHHHHHHHTSSSEEEEE--SSSTCCCTTCEEEESSHHHHHHHHHCCTTSEEE-TTS-TT-EEE--EEEEE---..ECEEEEEEEEEETTTTEEEEEEE CS
  ATP-grasp_2  30 aeeaakklgekelvvKaQvlaGGRGKagGvklvkskeeakeaakellgkelvtkqtgkeGkkvekvlveeald..ikkElYlsivlDraskkvvviaS 125
                  ++++   + +++lv K   l+  RGK+g +kl ++ +eak+ ++e  g+    +q +++     + lve  ++   ++E+Y+ i   r+  +  +++ 
   EPX74731.1  71 VARQHPWVHDSKLVAKPDQLIKRRGKSGLLKLNSTWDEAKDWIRERAGQP---QQVQHAVGLLTTFLVEPFVPhsSDEEYYININSVRE--GDWILFC 163
                  5555555678899999999999***********************99986...46777778899999998765116799**99876665..5677889 PP

                  SSTTS-HHHHHHH-GGGEEEEEEBTTTB--HHHHHHHHHHCT--CHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEE CS
  ATP-grasp_2 126 seGGvdiEevaakkPekiikvaidpakglkeeqareiakklglekelvkkaakiikklyklfveldatlvEiNPLvv 202
                  +eGGvd+ +v ak  + +i v +d+    ++e a++++   g+++++ ++++++i +ly+++v+++ t +EiNPLv+
   EPX74731.1 164 NEGGVDVGDVDAKAKKILIPVCLDNFPS-RTEIANTLL--SGIPEKQHDSLVDFIIRLYSVYVDCQFTYLEINPLVI 237
                  **************99999999998665.555666665..599********************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (493 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       389  (0.0216967); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 3280.39
//
Query:       EPX74732.1  [L=260]
Description: short chain dehydrogenase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.1e-60  204.2   1.0    2.4e-60  204.0   1.0    1.0  1  adh_short_C2   Enoyl-(Acyl carrier protein) reductase
    4.6e-41  140.4   2.4    5.7e-41  140.1   2.4    1.1  1  adh_short      short chain dehydrogenase
    1.6e-13   50.9   1.0    2.3e-13   50.5   1.0    1.1  1  KR             KR domain
     0.0087   15.0   0.0      0.012   14.6   0.0    1.1  1  Spore_IV_A     Stage IV sporulation protein A (spore_IV_A)
  ------ inclusion threshold ------
      0.014   14.5   0.3       0.88    8.6   0.0    2.1  2  RmlD_sub_bind  RmlD substrate binding domain
       0.11   11.9   0.2       0.25   10.8   0.2    1.6  1  Epimerase      NAD dependent epimerase/dehydratase family
       0.13   11.6   0.1       0.23   10.8   0.0    1.5  2  2-Hacid_dh_C   D-isomer specific 2-hydroxyacid dehydrogenase,


Domain annotation for each model (and alignments):
>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  204.0   1.0   9.5e-64   2.4e-60       1     234 []      28     258 ..      28     258 .. 0.96

  Alignments for each domain:
  == domain 1  score: 204.0 bits;  conditional E-value: 9.5e-64
                   TTTTSHHHHHHHHHHHTT-EEEEEESSGGHHHHHHHHHHHTTSE.E.EE--TTSHHHHHHHHHHHHHHHSSEEEEEE-----EGCSS-GGGH-HHHH CS
  adh_short_C2   1 GaasgIGraiAkalaeeGaevvltdlneeakkrveelaeelgae.v.lecDVtdeeqvealveevvekfgklDilvnnagiapklkgpfletsreef 95 
                   G  +gIG  +A+a+a+ Ga+v++t+ + +a+++++e+ +++g + + l+c+V++ ++v+++++e+ ++fg++D +v nag+++   ++++e++ ee+
    EPX74732.1  28 GCSKGIGLDVARAFAQSGADVLITYNSTNAESQAKEISQKYGVKaIaLKCNVSNCDEVKSVFDEALKQFGHIDTVVANAGVCTG--KSAIEMTPEEW 122
                   6779**************************************88537*************************************..*********** PP

                   HHHHHHHTHHHHHHHHHHHHHCTSC..CEEEEEEEGGGTSB.STTTT.HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCTGGGGSTTHHHH CS
  adh_short_C2  96 draldvnlyslfllakaalplmkeg..gsivnlssvgaerv.vpnyn.aygaaKaalealtrylAvelgpkgiRvNavspgpikTlaasgikgfdel 188
                    + + +nl+++f++ + a  +++++  gs+ ++ s+++ +v vp+ + ay+a+Ka++++l+++lAve+++   RvN+vspg+i T+++ g++     
    EPX74732.1 123 SKDITINLTGIFNVGHVAGAVFEKQgfGSLTATGSMSGAIVnVPQKQaAYNASKAGVIHLCKSLAVEWAD-FARVNVVSPGYISTDMTGGMH----- 213
                   ********************999888*******888666655999888*********************9.****************99987..... PP

                   HHHHHHHSTTSS-B-HHHHHHHHHHHCSGGGTT--SEEEEESTTGG CS
  adh_short_C2 189 leelearaplgrlgtpeevaeaalfLasdeasyitGqtlvvDgGlt 234
                    ee+   +p++r+g p+e   a++fLasd+a+y+tG +l vDgG+t
    EPX74732.1 214 -EEWVPYTPFRRIGLPRELVGAYVFLASDAATYVTGLDLKVDGGYT 258
                   .99******************************************8 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.1   2.4   2.2e-44   5.7e-41       1     190 [.      22     212 ..      22     216 .. 0.94

  Alignments for each domain:
  == domain 1  score: 140.1 bits;  conditional E-value: 2.2e-44
                 SEEEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHT.TSEEEEEE-TTTSHHHHHHHHHHHHHHHSSESEEEE---SS--SSGGGCSH CS
   adh_short   1 kvvlvtGassGIGraiakelakeGakvvvvdrseekleevakelkee.gakalaiqvDvtdreevealvekavkklgkldvLvnNAGitgsgpfselse 98 
                 k +l  G+s+GIG+++a+++a++Ga+v++  +++ ++e  ake+ ++ g ka+a++++v++ +ev+ ++++a k++g++d +v+NAG+   +++ e++ 
  EPX74732.1  22 KKALLYGCSKGIGLDVARAFAQSGADVLI-TYNSTNAESQAKEISQKyGVKAIALKCNVSNCDEVKSVFDEALKQFGHIDTVVANAGVCTGKSAIEMTP 119
                 679999*********************88.566677889999999999****************************************9999******* PP

                 HHHHHHHHHHTHHHHHHHHHHHHHHHHCTTEEEEEEEEGGG..TSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHHHHHH CS
   adh_short  99 eewervievNltgvflltravlpamlkqssGrIvnvsSvag..kvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdmakel 190
                 eew + i +Nltg+f++ + +   + kq  G+   ++S+ g   +    +aaY AsKa+v++l +sla e+a+   rvn+v PG+++Tdm+   
  EPX74732.1 120 EEWSKDITINLTGIFNVGHVAGAVFEKQGFGSLTATGSMSGaiVNVPQKQAAYNASKAGVIHLCKSLAVEWADF-ARVNVVSPGYISTDMTGGM 212
                 *****************************************7445556799**********************9.9**************9765 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.5   1.0   8.9e-17   2.3e-13       4     152 ..      25     175 ..      23     188 .. 0.84

  Alignments for each domain:
  == domain 1  score: 50.5 bits;  conditional E-value: 8.9e-17
                 EEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHT.T-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE---------TTT-- CS
          KR   4 litGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaeleal.gaevevvaaDvsdkdavealleeikaeeppikGvihaAgvlrdklleemt 101
                 l+ G+  g+Gl +ar  a++ga  l+    + +a++    + +e++++ g++  ++++ vs+ d+v+++++e+ ++++ i  v+  Agv   k   emt
  EPX74732.1  25 LLYGCSKGIGLDVARAFAQSGADVLITYNST-NAES----QAKEISQKyGVKAIALKCNVSNCDEVKSVFDEALKQFGHIDTVVANAGVCTGKSAIEMT 118
                 789********************99998877.2222....344555544************************************************** PP

                 HHHHHHHHTTTTHHHHHHHHH....TTTS--SEEEEEEEHHHHH--..TT-HHHHHH CS
          KR 102 aedleqvlapKvkGawnLhel....ledesldffvlfSSiagllgs..agqanYaaa 152
                  e++ + +   ++G+ n+ ++    +e++    ++ + S++g + +  ++qa+Y a 
  EPX74732.1 119 PEEWSKDITINLTGIFNVGHVagavFEKQGFGSLTATGSMSGAIVNvpQKQAAYNAS 175
                 *****************987612225668889999999**99887622577888876 PP

>> Spore_IV_A  Stage IV sporulation protein A (spore_IV_A)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   4.6e-06     0.012     193     237 ..      53      97 ..      47     125 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 4.6e-06
  Spore_IV_A 193 eseetkelaeeleekydvkvlavnveelkeedikeilekvLyefp 237
                 +s+++++ a+e+++ky+vk++a++++  + +++k++++++L++f 
  EPX74732.1  53 NSTNAESQAKEISQKYGVKAIALKCNVSNCDEVKSVFDEALKQFG 97 
                 567888999**********************************95 PP

>> RmlD_sub_bind  RmlD substrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0    0.0075        19       3      89 ..      24     140 ..      22     144 .. 0.74
   2 ?    8.6   0.0   0.00034      0.88     180     226 ..     149     196 ..     142     207 .. 0.87

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.0075
                    EEEESTTSHHHHHHHHHCTTTSEEEEEE-TT.....................T--TTSHHHHHHHHHHH--S......EEEE------HHHHHHSH CS
  RmlD_sub_bind   3 ilvtGanGqlGseLakqlaeeglevlaltre.....................eldltdaeavaellkeakpd......vvvnaAAytavDkaEsee 71 
                     l+ G +  +G ++a+++a++g++vl + ++                     ++++++ ++v+++++ea ++      vv na+  t   + E  +
     EPX74732.1  24 ALLYGCSKGIGLDVARAFAQSGADVLITYNStnaesqakeisqkygvkaialKCNVSNCDEVKSVFDEALKQfghidtVVANAGVCTGKSAIEMTP 119
                    678888889999999999999999998855558889999999999999999999999999999999887665455555777888888777777665 PP

                    H...HHHHHHTHHHHHHHHHH CS
  RmlD_sub_bind  72 e...aayavnaeavealAeaa 89 
                    e   ++  +n ++  ++ ++a
     EPX74732.1 120 EewsKDITINLTGIFNVGHVA 140
                    511145667777776666655 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00034
                    EE--EEHHHHHHHHHHHHHHCHH.GGG.-EEEE---BS-EEHHHHHHH CS
  RmlD_sub_bind 180 lgsPTsardlAevllqllekaaeekel.agvyHlanegetswlefAra 226
                    +gs T++ +++ +++++ +k+a+ ++  agv Hl  + ++ w++fAr+
     EPX74732.1 149 FGSLTATGSMSGAIVNVPQKQAAYNASkAGVIHLCKSLAVEWADFARV 196
                    678899999********99998866666******************96 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.2   9.6e-05      0.25       5      97 ..      28     131 ..      24     201 .. 0.63

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 9.6e-05
                 TTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC......EEEE--TT-HH....HHHHHHHHH.T-SEEEE--S---HHHHHHSHHHHHHHHT CS
   Epimerase   5 GatGfiGsalvkallekgyevigldrlssasntarledl......elveldltdrs....alerlfkee.qpdavihlAavggvaassedpadfieknl 92 
                 G +  iG  +++a+++ g +v+   + ++a+ +a++            ++++ + +     +++++k++ ++d+v+  A+v++ +  +e   + + k++
  EPX74732.1  28 GCSKGIGLDVARAFAQSGADVLITYNSTNAESQAKEISQkygvkaIALKCNVSNCDevksVFDEALKQFgHIDTVVANAGVCTGKSAIEMTPEEWSKDI 126
                 555568999***********999999988887776666589***9555666665551122456666777899****99998777777665555555555 PP

                 HHHHH CS
   Epimerase  93 qgtln 97 
                  ++l+
  EPX74732.1 127 TINLT 131
                 55443 PP

>> 2-Hacid_dh_C  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   9.2e-05      0.23      31      80 ..      16      66 ..       5     103 .. 0.73
   2 ?   -3.8   0.0       2.7     7e+03      37      52 ..     129     144 ..     116     150 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 9.2e-05
                  BS-GTTSEEEEES-SH.HHHHHHHHHHHTT-EEEEESSSHHHHHCHHHHTC CS
  2-Hacid_dh_C 31 gkelsgktvGiiGlGr.IGqavakrlkafgmkviaydrskkkeeeeeelgv 80
                    +l+gk+  + G+ + IG  va+ +++ g++v+++  s ++e++++e   
    EPX74732.1 16 LLSLKGKKALLYGCSKgIGLDVARAFAQSGADVLITYNSTNAESQAKEISQ 66
                  45899********9976**************99887776666663443322 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 2.7
                   SEEEEES-SHHHHHHH CS
  2-Hacid_dh_C  37 ktvGiiGlGrIGqava 52 
                      Gi+ +G+++ av 
    EPX74732.1 129 NLTGIFNVGHVAGAVF 144
                   5567888888877775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       737  (0.0411066); expected 358.6 (0.02)
Passed bias filter:                      628  (0.0350271); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 1846.51
//
Query:       EPX74733.1  [L=245]
Description: haloacid dehalogenase-like hydrolase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.7e-22   80.4   0.0    2.5e-22   79.8   0.0    1.3  1  HAD_2           Haloacid dehalogenase-like hydrolase
    5.3e-15   56.3   0.0    1.5e-13   51.6   0.0    2.0  1  Hydrolase       haloacid dehalogenase-like hydrolase
     0.0024   18.0   0.0       0.64   10.2   0.0    2.3  2  Hydrolase_6     Haloacid dehalogenase-like hydrolase
     0.0029   17.6   0.0     0.0061   16.6   0.0    1.5  1  Hydrolase_like  HAD-hyrolase-like


Domain annotation for each model (and alignments):
>> HAD_2  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.8   0.0   5.6e-26   2.5e-22       1     178 []      11     206 ..      11     206 .. 0.92

  Alignments for each domain:
  == domain 1  score: 79.8 bits;  conditional E-value: 5.6e-26
       HAD_2   1 iiFDlDgTlldteeliiqafnelleeyglselseeelrkliglslrellrklgeseeeeekieellrkyneekkk..kevkpydgvkelLeeLkeagyk 97 
                 ++FD+Dg+l+d+e+++ +++n +le+y+ + l++   ++++g + +++ + +++  +   +i+e++++ +    k   ++++++g+++lLe L  + + 
  EPX74733.1  11 CLFDMDGLLVDSETVYTKTTNFMLERYNKGPLPLTIKAQMMGRPGDKAAEVVINWSKIPMTIQEFVDEQQVIRAKfwSSMSLMPGAESLLEHLYTNHID 109
                 69***************************************************9988888999999998888888899********************* PP

       HAD_2  98 lgivTsksreaveekleqlg..iesyFdvivtsedvekk....KPdpeviekalekl..........klkkeeviyvGDsptDieaakkagikviav 178
                 ++++Ts++ ++ ++k ++l   ++++ + ++t++d   +    KP+p++ ++al+             l+++++i ++Ds  ++++ak+ag++vi+v
  EPX74733.1 110 IALATSSNVANYQMKTNHLRhaFDKFGENVITGDDPRIPpgrgKPHPDIWLQALNLInqnrekqslpPLSPKDCIAFEDSVPGVKSAKAAGMHVIWV 206
                 *******999999998887522678888899999976555666***********999899999999999***************************8 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.6   0.0   3.3e-17   1.5e-13       1     210 []       8     200 ..       8     200 .. 0.85

  Alignments for each domain:
  == domain 1  score: 51.6 bits;  conditional E-value: 3.3e-17
                 SSEEEEESBTTTBCHHHHHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHETTTE..HHHHTHHHHHHHHHCHHHHHHHHHHHHHHC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase   1 iktvvfDkdGTLttgepsvedvivsaalalaaaletgsehpigkalvaaakarsgaltgfatfigrg..ayaigkpewltaldippdlgaaigsaqsqg 97 
                 +k+++fD+dG L+++e + +++++                       + +++ + +lt  a++ gr   ++a+    w +                   
  EPX74733.1   8 YKACLFDMDGLLVDSETVYTKTTNFM--------------------LERYNKGPLPLTIKAQMMGRPgdKAAEVVINWSKIP--------------MTI 72 
                 69*********************999....................666666677777777766666666666666666655..............333 PP

                 HHHHHHTTHHHHHHHHHHTHHBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTT..GGGE.SEEEEHHCES....STTTSHHHHHHHHHHHT.. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxx.xxxxxxxxxx....xxxxxxxxxxxxxxxxx.. RF
   Hydrolase  98 rtvallqaralavftiadplkvkpeaaeavasLkaagievvlltgdnpetaeraanqlG..ddyf.daviasdiet....vakpspegkvaaireLq.. 187
                 ++ + +q+ ++a f+ + +  ++p+a+ ++++L  + i+++l+t++n ++++   n+l   +d+f ++vi++d+       +kp+p++ ++a++ ++  
  EPX74733.1  73 QEFVDEQQVIRAKFWSSMS--LMPGAESLLEHLYTNHIDIALATSSNVANYQMKTNHLRhaFDKFgENVITGDDPRippgRGKPHPDIWLQALNLINqn 169
                 3333335577889999999..*******************************99999888999**99999999999********************889 PP

                 ........STGGGEEEEESSHHHHHHHHHTT CS
                 ........xxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 188 ........gkpeevamVGDgvnDaaalaaAg 210
                          +p+++++++D+v +++ ++aAg
  EPX74733.1 170 rekqslppLSPKDCIAFEDSVPGVKSAKAAG 200
                 9999998888********************8 PP

>> Hydrolase_6  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.6   0.0    0.0038        17       2      22 ..      12      32 ..      11      63 .. 0.86
   2 !   10.2   0.0   0.00014      0.64       9      52 ..      86     129 ..      85     143 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0038
                 EEESTTTSEETTEE-TTHHHH CS
  Hydrolase_6  2 lfDidGvLwrgdkaipgaaea 22
                 lfD+dG L++ ++++ +  ++
   EPX74733.1 12 LFDMDGLLVDSETVYTKTTNF 32
                 8*********99998877655 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00014
                  SEETTEE-TTHHHHHHHHHHTT-EEEEEE---SS-HHHHHHHHH CS
  Hydrolase_6   9 LwrgdkaipgaaealnalraagkpvvllTNnsskseeeyakkle 52 
                  +w  ++++pga+ +l+ l  ++++++l T ++  + +   ++l+
   EPX74733.1  86 FWSSMSLMPGAESLLEHLYTNHIDIALATSSNVANYQMKTNHLR 129
                  69999************************998887776666664 PP

>> Hydrolase_like  HAD-hyrolase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.4e-06    0.0061       3      48 ..     152     206 ..     150     210 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.4e-06
                     STTSSHHHHHHHHHH---..........GGGEEEEES-TTTHHHHHHHCT-EEEEE CS
  Hydrolase_like   3 gKPepemydfalevlgsd..........peevlmiGDrlatDiagAnnaGwksvLV 48 
                     gKP+p ++ +al+ ++ +          p+++++  D+    +++A++aG++ + V
      EPX74733.1 152 GKPHPDIWLQALNLINQNrekqslpplsPKDCIAFEDS-VPGVKSAKAAGMHVIWV 206
                     9**************5554444455555999*******.***************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       429  (0.0239277); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.37
# Mc/sec: 1991.04
//
Query:       EPX74734.1  [L=201]
Description: GTPase Ryh1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.6e-60  201.0   0.5    1.1e-59  200.7   0.5    1.1  1  Ras          Ras family
    2.4e-37  127.8   0.1    4.2e-37  127.0   0.1    1.4  1  Roc          Ras of Complex, Roc, domain of DAPkinase
    2.2e-16   59.8   0.4    2.8e-16   59.5   0.4    1.1  1  Arf          ADP-ribosylation factor family
      3e-06   26.8   0.1    4.8e-06   26.1   0.1    1.4  1  SRPRB        Signal recognition particle receptor beta subuni
      3e-06   26.9   0.1    3.5e-05   23.4   0.1    2.0  2  GTP_EFTU     Elongation factor Tu GTP binding domain
    1.9e-05   24.7   0.0    3.3e-05   23.9   0.0    1.5  1  MMR_HSR1     50S ribosome-binding GTPase
    2.2e-05   23.9   0.8    2.7e-05   23.7   0.8    1.2  1  Gtr1_RagA    Gtr1/RagA G protein conserved region
    0.00034   20.6   0.1        0.4   10.6   0.1    2.2  2  RsgA_GTPase  RsgA GTPase
  ------ inclusion threshold ------
      0.043   13.3   0.0      0.078   12.5   0.0    1.3  1  AAA_7        P-loop containing dynein motor region
      0.055   13.5   0.6          6    6.9   0.0    3.1  3  Dynamin_N    Dynamin family
      0.092   12.2   0.1       0.56    9.6   0.0    2.1  2  TniB         Bacterial TniB protein
       0.13   12.0   1.1       0.48   10.2   0.8    2.2  1  PduV-EutP    Ethanolamine utilisation - propanediol utilisati


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  200.7   0.5   7.3e-63   1.1e-59       1     159 [.      13     171 ..      13     173 .. 0.99

  Alignments for each domain:
  == domain 1  score: 200.7 bits;  conditional E-value: 7.3e-63
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeikr 99 
                 Klv++G+++vGKtsl++rf+ d+F+++y++Tig+df++k++ +++++v+l++wDTAGqe+f+sl ++y+rd++++++vydit+++sf n +kw+e+++ 
  EPX74734.1  13 KLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRA 111
                 89************************************************************************************************* PP

                 HSTTTSEEEEEEETTTGGGG-SS-HHHHHHHHHHHTSEEEEEBTTTTCTHHHHHHHHHHH CS
         Ras 100 vaeenvpivLvGnKvDleekravsteegeelakelglkfletSAktnenveeafeellre 159
                    ++v ivLvGnK+Dl++kr+vs+eege+ a+el+++++etSAk  +nv+++f ++++ 
  EPX74734.1 112 ERGDDVIIVLVGNKTDLSDKRQVSQEEGEKKASELKIMHMETSAKAGYNVKQLFRKIAQM 171
                 ********************************************************9975 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.0   0.1   2.8e-40   4.2e-37       1     120 []      13     128 ..      13     128 .. 0.89

  Alignments for each domain:
  == domain 1  score: 127.0 bits;  conditional E-value: 2.8e-40
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE...GHHHHCHH CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd...srssenlk 96 
                 K+v++G+++vGKtsl++rf+ d+f++++++tig+dfl+k++  ++        ++v+l++WDtaGqerfrsl p+y+r++++ai+vyd    +s+ n +
  EPX74734.1  13 KLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMY-LED-------RTVRLQLWDTAGQERFRSLIPSYIRDSSVAIIVYDitnHNSFVNTE 103
                 99************************************9973.322.......5799*******************************64333556899 PP

                 HHHHHHHHHCSSS-E.EEEEE-TTT CS
         Roc  97 eWlkelkkvagkspv.ilvgnkiDl 120
                 +W++++++++g++++ +lvgnk+Dl
  EPX74734.1 104 KWIEDVRAERGDDVIiVLVGNKTDL 128
                 ********9998865168*****95 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.5   0.4   1.9e-19   2.8e-16      12     174 ..       9     171 ..       2     172 .. 0.86

  Alignments for each domain:
  == domain 1  score: 59.5 bits;  conditional E-value: 1.9e-19
                 TTEEEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSSEE..EEE..EEETTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHHHH CS
         Arf  12 kkelrilllGLDnaGKtTilkklkleelvt.tvPTigfn..vee..leiknlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLk 105
                  +++++++lG  + GKt ++++++ +++++  + Tig +  +++  le +++++++wD  Gqe+ R+l  +Y ++  + i v D ++++ + ++++ ++
  EPX74734.1   9 LRKYKLVFLGEQSVGKTSLITRFMYDQFDNtYQATIGIDflSKTmyLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIE 107
                 5899************************98457899865214541145599********************************************9999 PP

                 HHCTSGCCTTSEEEEEEE-TTSTTSS-HHHHHHHTTGGGSSSSSSEEEEEEBTTTTBTHHHHHHHHHHH CS
         Arf 106 alleeeelkevallvlaNKqDlpealseeelrellgleelkgkrkleiqkcsavkgeglkeglewlses 174
                  + + e+  +v++++++NK Dl++  + ++ + + + +elk    +  +++sa  g ++k+ +++++++
  EPX74734.1 108 DV-RAERGDDVIIVLVGNKTDLSDKRQVSQEEGEKKASELK----IMHMETSAKAGYNVKQLFRKIAQM 171
                 86.778899**************998888888888888888....667789999999999999999886 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.1   3.2e-09   4.8e-06       5     131 ..      13     135 ..      10     191 .. 0.73

  Alignments for each domain:
  == domain 1  score: 26.1 bits;  conditional E-value: 3.2e-09
                 EEEEE-STTSSHHHHHHHHHHSS---B---S...S-EEETTG...GGTT-SEEEETT-GCCSHHHHHHHHHHGGEEEEEEEEETTS-HHHHHHHHHHHH CS
       SRPRB   5 avllvGlsdsGKTslftrLttdsvkktvtSq...essaalkvksekgskltliDfPGheklrqklleklkaksslkglvfvvDStidpkevkevAElly 100
                 +++++G +  GKTsl+tr + d++ +t+ +    +  + + + +++  +l+l D  G+e++r+ +  + +  ss+  +v+ +  t +     ++  ++ 
  EPX74734.1  13 KLVFLGEQSVGKTSLITRFMYDQFDNTYQATigiDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY-IRDSSVAIIVYDI--T-NHNSFVNTEKWIE 107
                 6899******************99999876544133344445899999**************987777.5556676777744..3.5667778888888 PP

                 HHHHHHHHHTT---EEEEEE-TTSTT---HH CS
       SRPRB 101 eilliteklkdavdiliACnKqelflakspk 131
                 ++  +     d v i++  nK +l+  ++ +
  EPX74734.1 108 DVRAERG---DDVIIVLVGNKTDLSDKRQVS 135
                 8876655...778888888888888777654 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.19   2.8e+02       6      27 ..      14      35 ..      10      48 .. 0.83
   2 !   23.4   0.1   2.4e-08   3.5e-05      56     193 ..      48     173 ..      37     174 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.19
                EEEEESTTSSHHHHHHHHHHHT CS
    GTP_EFTU  6 igiighvDhGKtTLtdrLlykt 27
                ++++g    GKt+L+ r +y+ 
  EPX74734.1 14 LVFLGEQSVGKTSLITRFMYDQ 35
                678899999*******999976 PP

  == domain 2  score: 23.4 bits;  conditional E-value: 2.4e-08
                 SSCEEEEEETTCSSEEEEEEEESSSGGGHHHHHHHHHT-SEEEEEEETT.TBSTHHHHHHHHHHHHTTTE...EEEEEESCGSTHHHHHHHHHHHHHHH CS
    GTP_EFTU  56 iksaaisleketkkylinliDtPGHvdFskevirglrvlDgavlvvdav.eGvepqteevlrlalkegvp...iivfiNKmDrlkaelkeiveevkqkl 150
                   s++++le   ++ +++l Dt G + F + +   +r   +a++v d++ +   ++te+ ++ +++e+     i+++ NK D  +++   + e  k+  
  EPX74734.1  48 FLSKTMYLE--DRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIIVYDITnHNSFVNTEKWIEDVRAERGDdviIVLVGNKTDLSDKRQVSQEEGEKKAS 144
                 445556666..9999********************************9725678999999999999988777577777****99776554444444333 PP

                 HHHHHHHHHHHHTTTTTEEEEEEBTTTTBTHHHHHHHHHHHSH CS
    GTP_EFTU 151 srkeeklekygekgekevpvvfgSalkgegvktllealvellp 193
                               e ++  + +Sa+ g +vk+l++ + ++lp
  EPX74734.1 145 --------------ELKIMHMETSAKAGYNVKQLFRKIAQMLP 173
                 ..............12466778899999999999998888876 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.0   2.2e-08   3.3e-05       2     112 ..      14     121 ..      13     151 .. 0.73

  Alignments for each domain:
  == domain 1  score: 23.9 bits;  conditional E-value: 2.2e-08
                 EEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEETT..EEEEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEETT.TTCSHHHHHHH CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvklkg..keielvDtpGliegaseekglgkaflaleeadlillvvdas.eeklkpldeel 97 
                  +++G   vGK++Li + + ++   + ++   +d   +++ l++   +++l+Dt+G  e   + ++l  ++ +  +++++++v d++ ++++ + ++ +
  EPX74734.1  14 LVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDrtVRLQLWDTAG-QE---RFRSLIPSYIR--DSSVAIIVYDITnHNSFVNTEKWI 106
                 6899***************987766666666666677777755534679*******.44...33477777775..567888888877433455555667 PP

                 HHHHHHTTSEEEEEE CS
    MMR_HSR1  98 eelleeakkplilvl 112
                 e+++ e+++++i+vl
  EPX74734.1 107 EDVRAERGDDVIIVL 121
                 777666666665553 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.8   1.8e-08   2.7e-05       1     141 [.      13     144 ..      13     190 .. 0.71

  Alignments for each domain:
  == domain 1  score: 23.7 bits;  conditional E-value: 1.8e-08
   Gtr1_RagA   1 kvLLmGksgsGKtsmr.siiFdnylardtlrlgatidveksevrfl.gnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDvesreleedlet 97 
                 k++++G+++ GKts+  + ++d++   +t + ++ id   +++ +  + + l+lwD  Gqe+f          +  r+ +v i V D++    ++++ +
  EPX74734.1  13 KLVFLGEQSVGKTSLItRFMYDQFD--NTYQATIGIDFLSKTMYLEdRTVRLQLWDTAGQERFRSLI-----PSYIRDSSVAIIVYDIT---NHNSFVN 101
                 799***********76156676665..566666666666666655415789***********98876.....44456667778888999...6678889 PP

   Gtr1_RagA  98 lkeilealrqyspeakvfvli.hKmDliqedereeifeerkeeir 141
                  ++ +e +r    +  + vl+ +K+Dl +  +r+  +ee +++ +
  EPX74734.1 102 TEKWIEDVRAERGDDVIIVLVgNKTDLSD--KRQVSQEEGEKKAS 144
                 9999****999999999999977999974..44444444444333 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0    0.0015       2.2      96     121 ..       8      33 ..       2      46 .. 0.82
   2 !   10.6   0.1   0.00027       0.4      46      98 ..     116     169 ..      70     175 .. 0.72

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0015
                  HCTTSEEEEECSTTSSHHHHHHHHCT CS
  RsgA_GTPase  96 llkdktsvlvGqSGvGKStLinallp 121
                   l++   v++G+  vGK++Li +++ 
   EPX74734.1   8 SLRKYKLVFLGEQSVGKTSLITRFMY 33 
                  6778889**************98765 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00027
                  T-EEEEEEE-GGG--HHH.HHHHHHHHHHHTTSEEEE--TTTHTTHHHHHHHCT CS
  RsgA_GTPase  46 giepvivlnKiDlleeee.eleelkeelealgyevllvsaktkegleelkellk 98 
                  ++ +v+v nK+Dl ++++ + ee +++ ++l +  + +sak + ++++l ++++
   EPX74734.1 116 DVIIVLVGNKTDLSDKRQvSQEEGEKKASELKIMHMETSAKAGYNVKQLFRKIA 169
                  34456666********99666777777788888888888888888888877766 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   5.2e-05     0.078      32      73 ..      10      52 ..       6      58 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 5.2e-05
       AAA_7 32 nkkpvllvGptGtGKtviikd.llkkldkekylsltinfsaqt 73
                +k+++++ G++ +GKt++i++ + +++d++   ++ i f ++t
  EPX74734.1 10 RKYKLVFLGEQSVGKTSLITRfMYDQFDNTYQATIGIDFLSKT 52
                577899***************7788888777778888888777 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.0     0.004         6       2      19 ..      15      32 ..      14      43 .. 0.83
   2 ?    2.3   0.0      0.11   1.6e+02     119     164 ..      72     120 ..      55     125 .. 0.70
   3 ?    1.0   0.4      0.25   3.8e+02     108     122 ..     172     186 ..     115     195 .. 0.48

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.004
                EEEEBTTTTHHHHHHHHH CS
   Dynamin_N  2 avvGsqSsGKSSvlnaLl 19
                +++G+qS GK+S++   +
  EPX74734.1 15 VFLGEQSVGKTSLITRFM 32
                789**********97766 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.11
                 S..HHHHHHHSTTEEEEEEEETTS-CCC-CHHHHHHHHSTTBTT.EEEE CS
   Dynamin_N 119 q..elvkeyikkadiilavtsanhdlsnsealflarevdpkgkr.tivv 164
                    +l+ +yi+++++ + v +  +  s ++ ++  + v+ +    +i+v
  EPX74734.1  72 RfrSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDdVIIV 120
                 1448999***999999999998887777777777666665443335555 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.25
                 ---B-SSSGTTSHHH CS
   Dynamin_N 108 lPGldsvnkrdqelv 122
                 lPG+ +v+++ ++l+
  EPX74734.1 172 LPGMENVETQSTQLI 186
                 455555555555555 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.0   0.00038      0.56      34      62 ..      10      38 ..       4      54 .. 0.82
   2 ?   -0.3   0.0       0.4     6e+02      62      94 ..     138     172 ..     119     189 .. 0.62

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00038
        TniB 34 rmpnlllvGdsnnGKtmivekFarlhppe 62
                r  +l+++G++ +GKt+++ +F+ ++ ++
  EPX74734.1 10 RKYKLVFLGEQSVGKTSLITRFMYDQFDN 38
                6678999***************9887554 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.4
        TniB  62 ekdedaekvpvlvvqappkp..dekrlyaaiLeal 94 
                 e +++a++++++++++  k+  + k+l+++i + l
  EPX74734.1 138 EGEKKASELKIMHMETSAKAgyNVKQLFRKIAQML 172
                 22345567777777776666224567777776655 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.8   0.00032      0.48       3      41 ..      13      53 ..      11     170 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00032
   PduV-EutP  3 killiGkvgsGKttLtqalkgeel..kYkktqaiefsdevi 41
                k++++G+  +GKt+L  ++  +++  +Y+ t  i+f ++++
  EPX74734.1 13 KLVFLGEQSVGKTSLITRFMYDQFdnTYQATIGIDFLSKTM 53
                789************99987655522799999999988775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       876  (0.0488594); expected 358.6 (0.02)
Passed bias filter:                      556  (0.0310112); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.38
# Mc/sec: 1584.72
//
Query:       EPX74735.1  [L=300]
Description: CTNS domain-containing protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.6e-12   44.8  18.1    2.4e-09   36.8   0.8    3.5  3  PQ-loop   PQ loop repeat
  ------ inclusion threshold ------
       0.58   10.1   5.8       0.26   11.2   1.9    2.4  2  MadM      Malonate/sodium symporter MadM subunit


Domain annotation for each model (and alignments):
>> PQ-loop  PQ loop repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   4.6   1.6e-06     0.014       2      53 ..      24      75 ..      23      82 .. 0.88
   2 ?    0.7   0.3     0.051   4.6e+02       2      19 ..     107     124 ..     106     124 .. 0.92
   3 !   36.8   0.8   2.7e-13   2.4e-09       3      47 ..     185     229 ..     183     238 .. 0.93

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.6e-06
     PQ-loop  2 seilgyislvlwlvsyiPQiikNykrkSteGlSilflllwllGdilsllyli 53
                s+++ +i++++ ++sy+ Q++++ k    +GlS+++l l  +G +  l++ i
  EPX74735.1 24 SFVSAIIIIIGLVLSYLLQVYRIVKLGTSKGLSFSYLGLGYIGVLNALANVI 75
                78999**********************************9999776655555 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.051
     PQ-loop   2 seilgyislvlwlvsyiP 19 
                 s+++++ +++l++  y+P
  EPX74735.1 107 SQVMSMGAVLLSFWMYLP 124
                 7999**********9999 PP

  == domain 3  score: 36.8 bits;  conditional E-value: 2.7e-13
     PQ-loop   3 eilgyislvlwlvsyiPQiikNykrkSteGlSilflllwllGdil 47 
                  +lg+ + ++ +v+y+PQ i + ++kS + lSi +++ ++ G++l
  EPX74735.1 185 AFLGFSASFCAIVQYVPQFISTIRHKSHGALSIPMMVVQTPGGFL 229
                 68****************************************987 PP

>> MadM  Malonate/sodium symporter MadM subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   1.9   2.9e-05      0.26      41      54 ..      27      40 ..      25      43 .. 0.94
   2 ?   -2.4   0.1      0.51   4.6e+03      55      55 ..      61      61 ..      49      79 .. 0.59

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 2.9e-05
        MadM 41 SAiAIllGLvlAYi 54
                SAi I++GLvl+Y+
  EPX74735.1 27 SAIIIIIGLVLSYL 40
                9************6 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.51
        MadM 55 G 55
                G
  EPX74735.1 61 G 61
                3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (300 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1096  (0.06113); expected 358.6 (0.02)
Passed bias filter:                      543  (0.0302861); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.29s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 2139.82
//
Query:       EPX74736.1  [L=307]
Description: SUMO E1-like activator enzyme Rad31 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      3e-24   85.7   0.0      4e-24   85.3   0.0    1.2  1  ThiF      ThiF family


Domain annotation for each model (and alignments):
>> ThiF  ThiF family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.3   0.0   2.2e-28     4e-24       1     227 [.      14     300 ..      14     307 .] 0.82

  Alignments for each domain:
  == domain 1  score: 85.3 bits;  conditional E-value: 2.2e-28
                 THHHHHHHHHHHHHHHHTSEEEEE--SHHHHHHHHHHHHHTTTEEEEEESSB--GGGGGTBTTS-GGGTTSBHHHHHHHHHHHT-TTSEEEEEES-CCG CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        ThiF   1 ysrqlallgedgqekLrdskvllvGaGglGsellknLalsGvgkltlvDnDkielsNlnRqflfreediGkpKaevaaealqeinpdveveavteritd 99 
                 y+rq++l+g   q++L++s+vll+ a  l +e++knL+l+G+g+l l D   +e+++++ qf  ++++iGk+K+ ++ e+l+++np v+++ ++ +i +
  EPX74736.1  14 YDRQIRLWGFNAQQALKQSRVLLITASPLSNEIAKNLVLAGIGELCLQDTHSVEMQDVHDQFFLEDSNIGKSKVSSLIEKLKDLNPLVKLSSLNTPIAE 112
                 89****9******************************************************************************************88 PP

                 .CCS-HHHHTT-SEEEEESSSHHHHHHHHHHHHHHT-EEEEEEEETTEEEEEEE.EE......CCS-ECTSS-T.......GGS.EECCCCEEHHH... CS
                 .xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xx......xxxxxxxxxxx.......xxxxxxxxxxxxxxx... RF
        ThiF 100 .etvleellesvDlVvdalDniearrlvnracvkkgiplieagtlgfegqvvvi.ip......gktgcyeCldp.......sstedptekkvplct... 180
                  +   e++++s+++V+ +  ++++   vn++c+ ++ p+  +++ g++g++++  i+      +        +        s++++p +          
  EPX74736.1 113 lS---ESIISSFQMVIATQLQYDDFCKVNNLCRTSKRPMYASSCYGLYGFAFADlIDhefvieK------TVENtkveqamSTSQKPMQV-----Afdt 197
                 44...7***************************9999***************996431332221......22112212222233333333.....1445 PP

                 .............................................................HHHCTE-B-HHHHHHHHHHHHHHHHHHHTTBCGGGCCE CS
                 .............................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        ThiF 181 .............................................................siagnipaiatttavvaglaalellkllsgkeklensl 218
                                                                              s         +++++v+g++ +++l ++s+++   +++
  EPX74736.1 198 algsklkprlakkvpaaypallsvlkhnrsdpdsikkmcleqkldpsailnesflndfsqnS----NFQWMPVISIVGGVVSQDALNAISKRQYPIDNF 292
                 55888888888888888999999999999999999999999999999888888877554332....33478889999*********9998777555554 PP

                 EEECCTTTT CS
                 xxxxxxxxx RF
        ThiF 219 ltqvdlles 227
                 +  +d+++s
  EPX74736.1 293 W-IFDAETS 300
                 4.7777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (307 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       530  (0.029561); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2329.53
//
Query:       EPX74737.1  [L=1469]
Description: sulfite reductase Sir1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.4e-48  162.5   0.1    4.3e-46  156.3   0.0    2.4  2  NIR_SIR       Nitrite and sulphite reductase 4Fe-4S domain
    1.3e-30  105.1   0.0    4.1e-14   52.2   0.0    2.5  2  NIR_SIR_ferr  Nitrite/Sulfite reductase ferredoxin-like half 
    8.6e-30  103.8   0.0    2.3e-29  102.4   0.0    1.8  2  Flavodoxin_1  Flavodoxin


Domain annotation for each model (and alignments):
>> NIR_SIR  Nitrite and sulphite reductase 4Fe-4S domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.3   0.0   7.2e-50   4.3e-46       3     157 ..    1047    1211 ..    1045    1213 .. 0.95
   2 !    3.7   0.0    0.0067        40      52     144 ..    1366    1447 ..    1320    1449 .. 0.81

  Alignments for each domain:
  == domain 1  score: 156.3 bits;  conditional E-value: 7.2e-50
                  SSCCCCCCSTCCCTBSS-SS-T......HHHHHHHHHHHCTCCCCTSSSS-BEEEEESSTCSTSSGGGSSEEEEEEEETTCEEEEEEEE--B-SSST CS
                  xxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
     NIR_SIR    3 anlrnvtlcpgaglceeallDt......telakaiedelepeygetylPrKfKiavsgcpnncvaveanDiglvgvkkdekeigfnilvGGglgrth 93  
                  ++ ++ +l+p +  ++e++++       +++a ++ +++ep yg+tylPrKfK+ v ++p+n+v+ ++nD+gl+++++  k +g+n+ vGGg+g+th
  EPX74737.1 1047 SKEISNSLLPTTSSYHEIWIEDpesvqkKKVAGEVAQDVEPLYGPTYLPRKFKVGVVAPPYNDVDIYTNDVGLIAITEGAKVVGYNLAVGGGMGTTH 1143
                  56789999************9977777777777777************************************************************* PP

                  C-TCEEEEE....EEEEGGGHHHHHHHHHHHHHHHS-CSSGGG-SHHHHHHHHHHHHHHHHHHHCCTC CS
                  xxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
     NIR_SIR   94 gakktsarl....gfvpeeevlevveaivevyrdhgdrknrkkeRlkylverlGvekFrekveeelgk 157 
                  ++kkt++rl    g+vp ++v+++v++++ v+rd+gdr+nrk++Rlky+v+ l ve F++k+ee +g 
  EPX74737.1 1144 NNKKTYPRLgsviGYVPSDKVVDAVKGVLIVQRDNGDRENRKHARLKYTVDTLSVETFKQKTEEVMGF 1211
                  ****************************************************************9985 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.0067
                  EESSTCSTSSGGGSSEEEEEEEETTCEEEEEEEE--B-SSSTC-TCEEEEEEEEEGGGHHHHHHHHHHHHHHHS-CSSGGG-SHHHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
     NIR_SIR   52 vsgcpnncvaveanDiglvgvkkdekeigfnilvGGglgrthgakktsarlgfvpeeevlevveaivevyrdhgdrknrkkeRlkylverlGv 144 
                  ++gc n c +  +  i+ vg   d     +n+++GGg   ++   k ++  + v+e e++++++ +++ y+     + +  e ++++v r G+
  EPX74737.1 1366 MTGCGNGCSRPWVAEIACVGKAPD----TYNLMLGGGHYGQRL-NKLYR--ASVQEREIIDLLRPLIKRYA----LEREDGEPFGDWVIRAGI 1447
                  688888888888877777775553....588999998765544.44555..5789999*************....999999999999999986 PP

>> NIR_SIR_ferr  Nitrite/Sulfite reductase ferredoxin-like half domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.5   0.0   2.4e-17   1.4e-13       7      64 ..     952    1008 ..     947    1013 .. 0.92
   2 !   52.2   0.0   6.9e-18   4.1e-14       3      69 .]    1235    1307 ..    1233    1307 .. 0.90

  Alignments for each domain:
  == domain 1  score: 50.5 bits;  conditional E-value: 2.4e-17
  NIR_SIR_ferr    7 kgyymvrlrvpnGritaeqlraladiaekygsgeirlTtrQnlqlhgvpeedleeile 64  
                     g+ m+r+r+p+G +t+eq+ a+ di+ k+g+ ++++TtrQ++q hgv + +l + ++
    EPX74737.1  952 YGF-MIRARLPAGVCTPEQWLAMDDISAKWGNKTLKMTTRQTFQWHGVLKGNLRNAIR 1008
                    578.************************************************988766 PP

  == domain 2  score: 52.2 bits;  conditional E-value: 6.9e-18
  NIR_SIR_ferr    3 qkdgkgyymvrlrvpnGri.tae...qlraladia....ekygsgeirlTtrQnlqlhgvpeedleeileeLaea 69  
                     ++gk  y+ +++v+nGri ++    ++++l+++a    ek ++ e+rlT++Q+l+l++v++e+le++ e+La++
    EPX74737.1 1235 TEKGK--YWRTIFVENGRIeDSGellFKTGLRELAeklyEKKSKAEFRLTANQHLILFNVSPEELEWVSEHLAKY 1307
                    57777..8***********98889**999999999766757777****************************986 PP

>> Flavodoxin_1  Flavodoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       2.4   1.4e+04      60     101 ..      33      70 ..      23      75 .. 0.66
   2 !  102.4   0.0   3.9e-33   2.3e-29       1     143 []     726     867 ..     726     867 .. 0.96

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 2.4
                   BEEGGGHHHHHHHHHHHCHHGCCSTTTTEEEEEEEEECTTSS CS
  Flavodoxin_1  60 dppengesffqdllelkgdeledgdlsgvrfavfglGdsaye 101
                   +p ++   +fq+ l++   +l++ + sg++ +v+ l ++a +
    EPX74737.1  33 EPLDT---TFQEALQDL-RKLKALNVSGKSTSVISLKSHADP 70 
                   44444...445555554.358899999999999988888766 PP

  == domain 2  score: 102.4 bits;  conditional E-value: 3.9e-33
                   EEEETSSSHHHHHHHHHHHHHHHTTTEEEEEEEEGTTSCGGGGGTHSEEEEEEEEETTTBEEGGGHHHHHHHHHHHCHHGCCSTTTTEEEEEEEEEC CS
  Flavodoxin_1   1 ilYgSetGnteklAkqlaeelgehgfnadvvslsdydeslseieeealllvvtsTfgnGdppengesffqdllelkgdeledgdlsgvrfavfglGd 97 
                   ilY+S+ G++e++Ak+l+  ++++g + +++ ++d+   ++e+++e+++++ +sT+g+Gd+p+ng+ +f++ +++      d  l+++++ vfg+Gd
    EPX74737.1 726 ILYASDGGTAENVAKRLHHRASARGSKCKIMVMDDFP--VEELPKETNVVLLVSTAGQGDFPQNGH-EFWEAFKNA-----DLVLNNLNYGVFGFGD 814
                   89***********************************..68************************9.777777776.....788************* PP

                   TTSSS.......TTHHHHHHHHHHHHTTCEEESSSEEEETTSTHGHHHHHHHH CS
  Flavodoxin_1  98 sayen.......FcaagkkldekleelGaerllkllegdednqegqeeafrkW 143
                   ++y++       ++  gk+ld k++e Ga+ ll+l+ g++++ +g e+a+++W
    EPX74737.1 815 YEYWPrkedklyYNRPGKQLDAKFQEFGAKPLLPLGLGNDQDPDGWETAYNTW 867
                   *****************************************99*********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1469 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       443  (0.0247086); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.87u 0.26s 00:00:01.12 Elapsed: 00:00:00.47
# Mc/sec: 9343.19
//
Query:       EPX74738.1  [L=1169]
Description: ATP-dependent RNA helicase Prp22 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.5e-23   80.7   0.6    2.3e-22   79.3   0.0    2.1  1  HA2          Helicase associated domain (HA2)
    2.4e-20   72.7   0.0    5.8e-20   71.4   0.0    1.7  1  OB_NTP_bind  Oligonucleotide/oligosaccharide-binding (OB)-fol
    6.2e-16   58.5   0.3    1.4e-15   57.4   0.3    1.6  1  S1           S1 RNA binding domain
    5.8e-13   49.1   0.0    1.5e-12   47.8   0.0    1.7  1  Helicase_C   Helicase conserved C-terminal domain
    8.9e-08   32.1   0.2    1.8e-07   31.1   0.2    1.4  1  DEAD         DEAD/DEAH box helicase
    4.8e-05   23.6   0.1    0.00017   21.8   0.1    1.9  1  AAA_22       AAA domain
    0.00011   22.5   0.1    0.00026   21.3   0.1    1.6  1  AAA_19       AAA domain
    0.00082   19.1   0.0     0.0019   17.9   0.0    1.6  1  AAA_30       AAA domain
      0.002   18.7   8.1      0.024   15.2   0.3    3.7  3  ABC_tran     ABC transporter
     0.0048   16.5   0.2      0.012   15.3   0.2    1.6  1  SRP54        SRP54-type protein, GTPase domain
     0.0089   16.0   0.1       0.11   12.4   0.1    2.2  2  Flavi_DEAD   Flavivirus DEAD domain
  ------ inclusion threshold ------
      0.029   14.1   0.2        1.1    9.0   0.0    2.4  2  IstB_IS21    IstB-like ATP binding protein
       0.04   14.0   0.2       0.85    9.7   0.2    2.5  1  AAA_14       AAA domain
      0.042   12.9   0.0      0.097   11.7   0.0    1.6  1  T2SSE        Type II/IV secretion system protein
       0.13   12.4   0.0       0.32   11.2   0.0    1.6  1  Roc          Ras of Complex, Roc, domain of DAPkinase


Domain annotation for each model (and alignments):
>> HA2  Helicase associated domain (HA2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.3   0.0   1.9e-25   2.3e-22       1     108 []     905     993 ..     905     993 .. 0.87

  Alignments for each domain:
  == domain 1  score: 79.3 bits;  conditional E-value: 1.9e-25
         HA2   1 AlelLvalgALdeegnlTelGrkmaelPlsprlakmLlaaaeleegcldevitivAalsveeifleeneeekeeeeeeeekakkkrkeeekarrklahk 99 
                 Al++L+al+ALd+eg lT+lGrkma++P++p+l+k+L++++el  gc +e++ti+A+ls+ +i  +++e++               +e++k+r++++++
  EPX74738.1 905 ALQNLYALSALDDEGLLTTLGRKMADFPMEPQLSKVLITSVEL--GCSEEILTIIAMLSAPNIWSRPREKQ---------------QEADKHRAQFSNP 986
                 89**************************************777..******************99999644...............3444445566666 PP

         HA2 100 daegDhltl 108
                 +  +Dhltl
  EPX74738.1 987 E--SDHLTL 993
                 6..999986 PP

>> OB_NTP_bind  Oligonucleotide/oligosaccharide-binding (OB)-fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.4   0.0   4.9e-23   5.8e-20       2      81 ..    1052    1127 ..    1051    1129 .. 0.95

  Alignments for each domain:
  == domain 1  score: 71.4 bits;  conditional E-value: 4.9e-23
                   HHHHHHHHTTCEEEEEETTCCEEETTTCEEEEE-TTSTTTTT...TSSSEEEEEEEEESSSEEEEEEEEE-HHHHHHHST CS
  OB_NTP_bind    2 raillaGlypqiarkdpskkdyktartktrvfihpsSvlaknekekepewvvytelvettklylrdltaidpawLllfag 81  
                    ++l++G + ++a++d ++  y+t+ ++ +v++hpsSvl+     k+ ewv+y+el++ttk y+++++ i p wL+++a+
   EPX74738.1 1052 LRALCSGHFTNVAKRDSQEGCYRTTVENAQVYMHPSSVLFG----KPAEWVIYHELIQTTKEYMHTVSTIHPRWLVEVAP 1127
                   579**********99999999***999*************8....*******************************9997 PP

>> S1  S1 RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.4   0.3   1.2e-18   1.4e-15       2      75 .]     205     281 ..     205     281 .. 0.96

  Alignments for each domain:
  == domain 1  score: 57.4 bits;  conditional E-value: 1.2e-18
                 STTTCEEEEEEEEEETTEEEEEET...TTEEEEEEGGGSSSSCEESCHHHCEETTEEEEEEEEEEETTTTEEEEEEC CS
          S1   2 pekgevveGeVtsvtkgGafVelg...ngvegfvpaselsrdarvedpdevlkvGdevkvkvlkvdkdrrriilsik 75 
                 p+ +ev++G+V+ + ++GafV l+      +g+v++s++++  rve+p+ev+  G++v vkv++vd++ +ri ls+k
  EPX74738.1 205 PKLNEVYSGIVSGIKDFGAFVTLDgfsRRTDGLVHISNIMSGRRVEHPSEVVAYGQPVLVKVIRVDEASKRIGLSMK 281
                 5679********************998899*********************************************97 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.8   0.0   1.3e-15   1.5e-12       5     111 .]     711     843 ..     705     843 .. 0.89

  Alignments for each domain:
  == domain 1  score: 47.8 bits;  conditional E-value: 1.3e-15
                 HHHHHHHHTTTTSEEEEEESSHHHHHH.HHHHHHHT........TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSS CS
  Helicase_C   5 allellkleeeggkilifvntidrlek.vklllekk........gikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlp 94 
                 +++++ +l+e  g+il+f++ +++++  +++l+e+         ++ ++++++ lp++ + +i+e    g ++v+iat++ae++++i+++ +V++ ++ 
  EPX74738.1 711 TIMQI-HLTEGPGDILVFLTGQEEIDTsCEILHERTkmlgdtvpELVILPVYSALPSEVQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVDPGFV 808
                 34444.68999************9999989997777788888999*****************************************************9 PP

                 SSH..................HHHHHHHTTSSSTT CS
  Helicase_C  95 rnv..................tsyiqriGRtgRag 111
                 ++                   +++ qr+GR+gR g
  EPX74738.1 809 KQScfdpklgmdslvvtpisqAQARQRSGRAGRTG 843
                 665577799999999******************86 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.1   0.2   1.5e-10   1.8e-07       7     170 ..     521     669 ..     515     674 .. 0.80

  Alignments for each domain:
  == domain 1  score: 31.1 bits;  conditional E-value: 1.5e-10
                 HHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEET.TSSHHHHHHHHHTTCSEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxx RF
        DEAD   7 aiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliig.gvaardqlskldngvdivvgt 104
                  ++++ +++ +++ +eTGsGKT+     + ++ y+   ++++ + +  P r  a  +++++ +      +rv   +g   + +d+ s++   ++i ++t
  EPX74738.1 521 FLEAVFKNQVLVLLGETGSGKTTQITQYLAEEGYT---DNRKIVGCTQPRRVAAMSVAKRVAEEVG---CRVGEEVGyTIRFEDKTSRM---TQIKYMT 610
                 56667788888999**********99999988874...888888899*******999999987777...56666666334557777777...9****** PP

                 HHHHHHHH.HCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBS CS
                 xxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 105 pgrlddll.stgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlp 170
                  g+l++ +  +    l++ ++++lDEa++   +   d +  +l+++ ++  d  l+  +iv SATl 
  EPX74738.1 611 DGMLQREClVDPL--LRKYSVIILDEAHERTVS--TDVLFGLLKHTVTKRPD--LK--LIVTSATLD 669
                 ******5524455..**************9997..89999999999444444..44..*******97 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.1   1.4e-07   0.00017       5     117 ..     528     654 ..     524     671 .. 0.74

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 1.4e-07
      AAA_22   5 agilvvtGesGtGKTtllrrlleqldeeakaee.erpevvfvtlpsstsskdllrellralglelka.........erlsseell.ealeqalrarav. 91 
                  ++lv+ Ge+G+GKTt + ++l +        +  ++++v +t p      ++++++++++g +  +           ++s+    +++++ + +r   
  EPX74738.1 528 NQVLVLLGETGSGKTTQITQYLAEEG------YtDNRKIVGCTQPRRVAAMSVAKRVAEEVGCRVGEevgytirfeD-KTSRMTQiKYMTDGMLQRECl 619
                 6899*******************973......236888888888888899999999999999777779999**9852.333333346666666666666 PP

      AAA_22  92 .......ielliiDEaqhlr.s.eealeeLrslln 117
                         +++i+DEa+  + s + ++  L++ + 
  EPX74738.1 620 vdpllrkYSVIILDEAHERTvStDVLFGLLKHTVT 654
                 777788888********954443666666655554 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.1   2.2e-07   0.00026       4     129 ..     524     656 ..     518     663 .. 0.63

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 2.2e-07
      AAA_19   4 avealkekvllvtaGpGtGKTrvlkhivallvelggvkp......eeillvaftgrAakelrerlaalgae.atTiH...rlalldfddlltealelle 92 
                 av  +k++vl++++  G+GKT+ +++ +a+   + ++k       ++++++++++r a+e+  r+   g+e  +Ti    +     +++++ ++ ++l+
  EPX74738.1 524 AV--FKNQVLVLLGETGSGKTTQITQYLAEEGYTDNRKIvgctqpRRVAAMSVAKRVAEEVGCRV---GEEvGYTIRfedKT--SRMTQIKYMTDGMLQ 615
                 44..899***************9998887665555443334444455666666666666665555...33366666521122..445555556666777 PP

      AAA_19  93 eaeeekklqeee.llivDEfqd..vd.elqyrLlkallgek 129
                 ++   ++l +++ ++i DE+ +  v+ ++ + Llk  ++++
  EPX74738.1 616 RECLVDPLLRKYsVIILDEAHErtVStDVLFGLLKHTVTKR 656
                 6566677778888******9863355667777777776555 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   1.6e-06    0.0019      12     110 ..     524     650 ..     518     663 .. 0.65

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 1.6e-06
      AAA_30  12 alltsgdrvavltGpAGtGKttalkal..reaweaag........grviglAptgkaAkvLa....eelgi......eastiakllkrlk......... 81 
                 a+  ++ +v vl G  G+GKtt ++++  +e ++++         +rv++++  +++A++++    ee+g       ++s++       +         
  EPX74738.1 524 AVF-KN-QVLVLLGETGSGKTTQITQYlaEEGYTDNRkivgctqpRRVAAMSVAKRVAEEVGcrvgEEVGYtirfedKTSRMT------Qikymtdgml 614
                 333.33.49*************9999865667777645888888888888888888888877444434443333333444444......1445555999 PP

      AAA_30  82 ......grarlepgtllivDEag..mvdtkqlaallk 110
                       +   l++ +++i DEa    v+t+ l  llk
  EPX74738.1 615 qreclvD-PLLRKYSVIILDEAHerTVSTDVLFGLLK 650
                 9999852.4566669******9622456666666665 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.1       7.2   8.5e+03      69      80 ..      77     118 ..      43     151 .. 0.44
   2 ?   -0.5   0.4       1.4   1.6e+03      46     117 ..     422     503 ..     406     507 .. 0.53
   3 !   15.2   0.3     2e-05     0.024       8     135 ..     525     635 ..     522     637 .. 0.57

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 7.2
                 -S-TTSBHHHH..............................H CS
                 xxxxxxxxxxx..............................x RF
    ABC_tran  69 qlfpeltvren..............................e 80 
                 +l+ +++v +n                               
  EPX74738.1  77 KLKATSQVDRNsgnkkteesnitsegdntnrkrelfpslsiP 118
                 444444444444433333334444443332223333333322 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 1.4
                 TCEGGGB-HHHCCHCEEEE-SS--S-TTSB.HHHH.....HHHTCHHHHHHHSTTGG......TTCBGESTTSGGS-HHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxx.....xxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  46 gkdlkeqeleslrkeigvlpqepqlfpelt.vren.....esdeeiekalsklglke......lkdtvvksspssLSgGqkqrv 117
                 g+ l ++++e  +ke ++ ++++  +++l+ v +      e+++ +++++s+  ++       ++++ v  ++  +S+G k  +
  EPX74738.1 422 GQVLASDRREMRQKEARMQSEKELEKQDLSlVWNDtmarpEDNKFVQDIRSSAAQQVtaqipnWRQRSV--KGPDVSYGRKTSL 503
                 344444556666666666666655555555333336666533333333333333322222222556665..5677888877655 PP

  == domain 3  score: 15.2 bits;  conditional E-value: 2e-05
                 EETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHHHHHTCHHHHHHHSTTGGTTCBGESTTS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   8 lkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvrenesdeeiekalsklglkelkdtvvkssp 106
                 + ++++++++Ge+G+GK+t +     ++  +eG    d++++     ++ r+  ++   + ++ +e+        +  e++  +++ ++++ +   ++ 
  EPX74738.1 525 VFKNQVLVLLGETGSGKTTQIT----QYLAEEGYT--DNRKIVG--CTQPRRVAAMSVAK-RVAEEV------GCRVGEEVGYTIRFEDKTSRM--TQI 606
                 5688999***********9764....333445554..3333333..22222222222222.222222......122233333333333322222..344 PP

                 GGS-HHHHHHHHHHHHHHHTSSEEEEEST CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 107 ssLSgGqkqrvalarallkkpkllllDEp 135
                 + +  G+ qr +l+  ll+k ++++lDE+
  EPX74738.1 607 KYMTDGMLQRECLVDPLLRKYSVIILDEA 635
                 89999999999999999999999999998 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.2   9.7e-06     0.012       2     128 ..     529     671 ..     528     679 .. 0.68

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 9.7e-06
                 EEEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEEESTSSTTHHHHHHHHHHHTTEEEEE..........SSTTSCHHHHHHHHHHHHH......HTTS CS
       SRP54   2 nvillvGlqGaGKTttlaKLaallkkegkkvllvaaDtfRaaAveQLktlaeklgvpvik..........kkeeadpaavakeavekak......eeki 84 
                 +v++l+G +G+GKTt +++  a      ++ ++ ++   R+aA+   k +ae++g +v +          k++   +++++ +++ + +       +k+
  EPX74738.1 529 QVLVLLGETGSGKTTQITQYLAEEGYTDNRKIVGCTQPRRVAAMSVAKRVAEEVGCRVGEevgytirfedKTSRMTQIKYMTDGMLQREclvdplLRKY 627
                 6899************998555555555566789999****************9998866665666654322233455555555544431222224567 PP

                 SEEEEEE--SSTTHHHHHHHHHHHHHHHSSSEEEEEEETTBHTH CS
       SRP54  85 dvvlvDTaGrlqndkelmeelkkikkvvkpdevllvldattgqe 128
                  v+++D a      ++++  l k   + +pd +l+v +at+  e
  EPX74738.1 628 SVIILDEAHERTVSTDVLFGLLKHTVTKRPDLKLIVTSATLDAE 671
                 77777777777777777777777777777777777777777655 PP

>> Flavi_DEAD  Flavivirus DEAD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.1   9.3e-05      0.11       3     135 ..     527     667 ..     525     672 .. 0.71
   2 ?    0.6   0.0       0.4   4.8e+02      50     112 ..    1027    1089 ..    1022    1092 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 9.3e-05
                 X--EEEEE--TTS-TTTTHHHHHHHHHHHTT--EE.EEESSHHHHHHHHHHTT.......TS-EEE-------------SEEEEEHHHHHHHHHHT--- CS
  Flavi_DEAD   3 kkkltvldlhPGaGktrkvlpelvkeaierrlrtl.vLaPtrvvlaemeealk.......glevryktsavkeektgrelvdvmchatftkrllspvrk 93 
                 k+++ vl    G+Gkt ++   l +e ++ + + +    P rv +  +++ ++       g ev y+ + ++++++    +  m    + +  l +   
  EPX74738.1 527 KNQVLVLLGETGSGKTTQITQYLAEEGYTDNRKIVgCTQPRRVAAMSVAKRVAeevgcrvGEEVGYTIR-FEDKTSRMTQIKYMTDGMLQRECLVDPLL 624
                 56667777789*******999999999888777773567999988777765541111111334444433.457777778899*************999* PP

                 ---SEEEEETTT--SHHHHHHHHHHHHHHHTT.S-EEEEEESS CS
  Flavi_DEAD  94 knyeliimDeahflDPasiaarGyletkaeeg.eaalilltat 135
                  +y +ii+Deah    +     G l++ ++++ + +li  +at
  EPX74738.1 625 RKYSVIILDEAHERTVSTDVLFGLLKHTVTKRpDLKLIVTSAT 667
                 ************7776666667777766654424556666665 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.4
                  HHHTTTS-EEE-------------SEEEEEHHHHHHHHHHT------SEEEEETTT--SHHHH CS
  Flavi_DEAD   50 eealkglevryktsavkeektgrelvdvmchatftkrllspvrkknyeliimDeahflDPasi 112 
                   + l  l  ry++++++  ++ + ++ ++c   ft+    + ++  y  ++ +   ++ P+s+
  EPX74738.1 1027 RKQLLRLMDRYHQPVISCGRNRELILRALCSGHFTNVAKRDSQEGCYRTTVENAQVYMHPSSV 1089
                  55566666799***9988888888999**********999999999*9999999999999997 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.0   0.00089       1.1      42      95 ..     523     577 ..     503     586 .. 0.85
   2 ?    2.7   0.0      0.08        95     103     158 ..     620     677 ..     579     682 .. 0.65

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00089
   IstB_IS21  42 sfiekkenivllGpsGvGKs.hlaialgveavraglsvlfvrvedLveelkrarr 95 
                 + + k++ +vllG +G GK+  ++  l+ e+ +++ +++ ++ ++ v+ +++a+r
  EPX74738.1 523 EAVFKNQVLVLLGETGSGKTtQITQYLAEEGYTDNRKIVGCTQPRRVAAMSVAKR 577
                 55668999***********7379999***********999999998888888875 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.08
   IstB_IS21 103 lkr.llkvdllilDdlgllpldqaeaellf.eviekryerrsiiitsnlpfaewdevl 158
                 ++  l k +++ilD+    +++ +    l+ + + kr + + i+ ++ l  +++++ +
  EPX74738.1 620 VDPlLRKYSVIILDEAHERTVSTDVLFGLLkHTVTKRPDLKLIVTSATLDAERFSSYF 677
                 444145669************9987766652466777777777777778888887776 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.2   0.00071      0.85       2      99 ..     528     665 ..     527     673 .. 0.62

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00071
      AAA_14   2 rkilvitGaRrvGKTtllkqlikell..........vkkesilyinldderd...................kkladpe...kllelileklke...... 62 
                 +++lv+ G   +GKTt + q++ e+           ++++++  +++ +                      k     +   + ++++     +      
  EPX74738.1 528 NQVLVLLGETGSGKTTQITQYLAEEGytdnrkivgcTQPRRVAAMSVAKRVAeevgcrvgeevgytirfedK-----TsrmTQIKYMT----Dgmlqre 617
                 689999999999999999999888876666666666555555555555543366777777766655443221.....12221222222....1222235 PP

      AAA_14  63 .......ekktylflDEiqev....pewekalkslvdegknldvivtG 99 
                        +k ++++lDE++e     + ++  lk+ v ++++l++ivt 
  EPX74738.1 618 clvdpllRKYSVIILDEAHERtvstDVLFGLLKHTVTKRPDLKLIVTS 665
                 566678777888999999998444455666667777777889999986 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   8.1e-05     0.097     118     154 ..     517     553 ..     432     576 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 8.1e-05
       T2SSE 118 iaevlrkavrerglilvsGgTgsGKttllyallkein 154
                 ++++  +av +++++++ G TgsGKtt +   l+e  
  EPX74738.1 517 LRKAFLEAVFKNQVLVLLGETGSGKTTQITQYLAEEG 553
                 344444566788888889*********9987776644 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00026      0.32       2      36 ..     531     565 ..     530     582 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00026
                 EEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEE CS
         Roc   2 vvlvGdsgvGKtsllkrfvedkfsekekstigvdf 36 
                 +vl+G++g+GKt+ +++++ ++  +++++++g++ 
  EPX74738.1 531 LVLLGETGSGKTTQITQYLAEEGYTDNRKIVGCTQ 565
                 69*******************99999999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1169 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       688  (0.0383736); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        71  (0.00396006); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.84u 0.29s 00:00:01.12 Elapsed: 00:00:00.48
# Mc/sec: 7321.98
//
Query:       EPX74739.1  [L=600]
Description: CTP synthase Cts1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   2.3e-123  410.7   0.2     3e-123  410.3   0.2    1.2  1  CTP_synth_N    CTP synthase N-terminus
    8.4e-57  192.0   0.0    1.3e-56  191.4   0.0    1.3  1  GATase         Glutamine amidotransferase class-I
     0.0001   22.2   0.4    0.00072   19.4   0.4    2.2  1  Peptidase_C26  Peptidase C26


Domain annotation for each model (and alignments):
>> CTP_synth_N  CTP synthase N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  410.3   0.2  5.1e-127    3e-123       1     263 [.       2     267 ..       2     269 .. 0.96

  Alignments for each domain:
  == domain 1  score: 410.3 bits;  conditional E-value: 5.1e-127
                  EEEEEEE--STTTTHHHHHHHHHHHHHCTT--EEEEEEE-SSSSSSTT--CCCC--EEE-TT--EEETHHHHHHHHHT----GGGEEEHHHHHHHHHH CS
  CTP_synth_N   1 kyilvtGGvvSglGkGiiaaslgallksrglkvtlikiDPYlnvdagtlsplehGEvfvlddGaetDlDlGnYeRfldikltkennittGkiyksvie 98 
                  ky+lv+GGv+Sg+GkG+ia+s+g llk+ glkvt+ikiDPY+n+dagt+splehGEvfvl+dG+e+DlDlGnYeR+l+++lt++nnittGk+y++vie
   EPX74739.1   2 KYVLVSGGVISGIGKGVIASSTGLLLKTLGLKVTSIKIDPYMNIDAGTMSPLEHGEVFVLNDGGEVDLDLGNYERYLNVTLTHDNNITTGKVYSKVIE 99 
                  8************************************************************************************************* PP

                  HHHTTTTTT----CCCHHHHHHHHHHHHHH.H.C.....T-SEEEEEE-S-TTSGGGHHHHHHHHHHHHHH-TTTEEEEEEEE--B-TTTSSB-HHHH CS
  CTP_synth_N  99 kerrGdylGktvqviphvtdeikeriekvakk.v.....eadvviveigGtvgdieslpfleairqlklelgkenvllihvtlvpvlkaagelktkpt 190
                  kerrGdylGktvq++phvt+ei+++ie+va+  v     e+dv+ive+gGtvgdies++f+ea+rq+++++g++n++ ihv+lvpv++  ge+ktkpt
   EPX74739.1 100 KERRGDYLGKTVQIVPHVTNEIQDWIERVARVpVdqsgeEPDVCIVELGGTVGDIESAAFVEAMRQFQFRVGRDNFVSIHVSLVPVIN--GEQKTKPT 195
                  ******************************9865888767***********************************************6..******** PP

                  HHHHHHHHHHT---SEEEEEESS---HHHHHHHHHHCT--GGGEEEEE--S-GGGHHHHHHHCTHHHHHHHHT CS
  CTP_synth_N 191 qhsvkelrslGiqpdiivcrsekeleeevkekialfcnvekeavisvkdvesiyevpllleeqglaelilekl 263
                  q+++++lrslGi pd+i+cr++ +lee+v +ki+lfc+v  e+v++v+dv+s+y+vp+lle++ l +++++++
   EPX74739.1 196 QQAIRDLRSLGIMPDLIACRCKLPLEENVIDKISLFCHVGPEQVLAVHDVSSTYHVPQLLENK-LLDFLKTRF 267
                  **********************************************************99875.555666665 PP

>> GATase  Glutamine amidotransferase class-I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  191.4   0.0   2.2e-60   1.3e-56       2     185 ..     314     547 ..     313     552 .. 0.94

  Alignments for each domain:
  == domain 1  score: 191.4 bits;  conditional E-value: 2.2e-60
                 EEESSTSTHHHHHHHHHHTT-EEEEEETTSHHHHH.............HHTHHSTSEEEEEEESSCTTTTTHHHHHHHHCTSTS-EEEETHHHHHHHHH CS
      GATase   2 liDnydsvtenlvhalvelgvkvevvpidasaeei.............lellknpdgilvsgGpgspgvegkieaikearenkiPiLGICLGmQllaie 87 
                 l+D+y sv+++l+h+++++g k+++ +++as++e              ++l ++++gil++gG+gs+g+eg+i+a+++aren++P+LGICLG+Q+++ie
  EPX74739.1 314 LKDSYISVIKALEHSAMRCGRKLDLQWVEASHLEAsmngtdplsyhraWHLVCSANGILIPGGFGSRGIEGMIAAAQWARENNTPYLGICLGLQVAVIE 412
                 89********************************9*********88776679*********************************************** PP

                 TTTEEE......................EEECEEEEEEEEEEEETTT...........CGGTTTTSEEEEEEEEEEEEESG...CHHHTTEEEEEEEET CS
      GATase  88 fgrkvv......................kekekehhggtmrlgddet...........allyglknevierhrHryevnpk...elepaglevtaksed 150
                 f+r+v                       +e +k+++ggtmrlg ++t           ++l+++++ev erhrHryevnpk    le++gl++++k+e+
  EPX74739.1 413 FARHVCgvehatseefvpqsdehvivymPEINKDKLGGTMRLGLRPTifqpdsewsklRKLHKNSKEVLERHRHRYEVNPKyveLLEQKGLTFVGKDEK 511
                 ***888888888888888888888899*9999**************************99999********************9999**********88 PP

                 TEEEEEEEEETT.T.EEEESSBTTSTTSTTHHHHHHH CS
      GATase 151 deelmeiiekkn.p.fvgvQFHPEststpegpellfn 185
                   e+meiiek++ p fvgvQ+HPE+ s+p +p+ +  
  EPX74739.1 512 A-ERMEIIEKRDhPyFVGVQYHPEYLSKPLRPSTPIF 547
                 8.9**************************99987655 PP

>> Peptidase_C26  Peptidase C26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.4   1.2e-07   0.00072      99     216 .]     390     534 ..     383     534 .. 0.63

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 1.2e-07
  Peptidase_C26  99 raalergvPilgiCrGlqllnvalGGtly..qdieeqsgltdhrehe..........qsaashavkve..........kgsllaellgseeievns 172
                    + a e+++P lgiC+Glq+  + +  ++   +++ +++ + +  eh           +     ++++           + s l +l + ++ ev  
     EPX74739.1 390 QWARENNTPYLGICLGLQVAVIEFARHVCgvEHATSEEFVPQSDEHVivympeinkdK--LGGTMRLGlrptifqpdsEWSKLRKLHK-NSKEVLE 482
                    5577899***********9988776554311333333333334444466566555331..2222222233556664444555666666.5555555 PP

  Peptidase_C26 173 lHhqaike........laeelrveAvae.DgviEaieseeakafvlgvQwHPE 216
                     H+   +          +++l  +  +e  + +E ie ++++  ++gvQ+HPE
     EPX74739.1 483 RHRHRYEVnpkyvellEQKGLTFVGKDEkAERMEIIEKRDHP-YFVGVQYHPE 534
                    5544444344898886688999999999899*********88.899******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (600 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       469  (0.0261587); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.45
# Mc/sec: 3967.92
//
Query:       EPX74740.1  [L=356]
Description: RCC domain-containing protein Ats1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.1e-24   85.0  14.7    3.2e-10   40.5   0.0    7.3  8  RCC1      Regulator of chromosome condensation (RCC1) repeat
    5.7e-18   64.2  19.0    5.8e-07   29.1   0.1    6.7  7  RCC1_2    Regulator of chromosome condensation (RCC1) repeat
  ------ inclusion threshold ------
        1.4    9.4   4.6         30    5.3   0.1    4.0  3  Reg_prop  Two component regulator propeller


Domain annotation for each model (and alignments):
>> RCC1  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.5   0.0   5.4e-14   3.2e-10       4      50 .]       3      47 ..       2      47 .. 0.97
   2 !    8.3   0.0    0.0006       3.6       2      49 ..      51     111 ..      50     112 .. 0.78
   3 !    9.0   0.0   0.00037       2.2       4      23 ..     119     139 ..     118     167 .. 0.67
   4 !   21.4   1.4   4.7e-08   0.00028       1      50 []     170     217 ..     170     217 .. 0.84
   5 !    8.2   0.1   0.00066         4       1      14 [.     267     280 ..     267     280 .. 0.90
   6 ?   -2.6   0.0       1.5   9.1e+03      39      48 ..     291     300 ..     285     301 .. 0.79
   7 ?   -1.8   0.2      0.82   4.9e+03       5      13 ..     309     317 ..     307     318 .. 0.84
   8 ?    0.2   0.0       0.2   1.2e+03      36      47 ..     338     349 ..     328     352 .. 0.79

  Alignments for each domain:
  == domain 1  score: 40.5 bits;  conditional E-value: 5.4e-14
                EEEEE--GGGTTSSSS---EEEEEE-GGGTTS-EEEEEEETTEEEEE CS
        RCC1  4 VysWGrndyGqLGlgttesvlvPtkveglsgnrvvkvacGddhtval 50
                +ys G+n  +qLGl ++e+ ++P kv++++    +++acG++ht+ l
  EPX74740.1  3 LYSLGSNGSYQLGLEHEEDISKPEKVNFPE--QPKQIACGGNHTLIL 47
                8*****************************..9***********975 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.0006
                 TEEEEEE--GGGTTSSSS-.......--EEEEEE-GGGTTS......-EEEEEEETTEEEE CS
        RCC1   2 GrVysWGrndyGqLGlgtt.......esvlvPtkveglsgn......rvvkvacGddhtva 49 
                 G+++++G n + q+ + ++        ++l+P + +   +        ++ +a G+ ++v+
  EPX74740.1  51 GQLWACGDNRMLQCCQTSDsnitdgsINRLKPIESSYIHEFhvinriYWSMIAVGWEFSVL 111
                 9*************99666445555566699988877766577778899999999999987 PP

  == domain 3  score: 9.0 bits;  conditional E-value: 0.00037
                 EEEEE--GGGTTSSSS-.--E CS
        RCC1   4 VysWGrndyGqLGlgtt.esv 23 
                 V+++G + +G LG+g    s+
  EPX74740.1 119 VWTCGAGPQGELGQGEVrASS 139
                 9*************9986333 PP

  == domain 4  score: 21.4 bits;  conditional E-value: 4.7e-08
                 TTEEEEEE--GGGTTSSSS-..--EEEEEE-GGGTTS.-EEEEEEETTEEEEE CS
        RCC1   1 dGrVysWGrndyGqLGlgtt..esvlvPtkveglsgn.rvvkvacGddhtval 50 
                 +G+Vy++G + +GqLG       +     +v++l +  +++kv+cG +++++l
  EPX74740.1 170 KGNVYGCGDGRKGQLGPAVPkmTN-----RVQFLAQVeHATKVCCGLQFSAFL 217
                 59**************94442344.....589998889************986 PP

  == domain 5  score: 8.2 bits;  conditional E-value: 0.00066
                 TTEEEEEE--GGGT CS
        RCC1   1 dGrVysWGrndyGq 14 
                 +Gr+y++Gr+d+ q
  EPX74740.1 267 NGRIYAFGRGDRAQ 280
                 6**********876 PP

  == domain 6  score: -2.6 bits;  conditional E-value: 1.5
                 EEEEETTEEE CS
        RCC1  39 kvacGddhtv 48 
                 ++a G+ h++
  EPX74740.1 291 AIAGGSEHNI 300
                 7999*99986 PP

  == domain 7  score: -1.8 bits;  conditional E-value: 0.82
                 EEEE--GGG CS
        RCC1   5 ysWGrndyG 13 
                 y  G+n++G
  EPX74740.1 309 YIYGWNEHG 317
                 788****99 PP

  == domain 8  score: 0.2 bits;  conditional E-value: 0.2
                 -EEEEEEETTEE CS
        RCC1  36 rvvkvacGddht 47 
                  v+ va+G+  t
  EPX74740.1 338 MVTYVAAGYATT 349
                 89******9866 PP

>> RCC1_2  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1       1.1   6.5e+03      20      30 .]       3      13 ..       3      13 .. 0.77
   2 !   29.1   0.1   9.7e-11   5.8e-07       2      27 ..      35      60 ..      35      63 .. 0.95
   3 !    4.4   0.0    0.0057        34       4      25 ..     102     124 ..      99     132 .. 0.77
   4 !   15.8   0.7   1.5e-06    0.0087       1      30 []     154     183 ..     154     183 .. 0.96
   5 !    5.5   0.0    0.0026        15       3      20 ..     206     223 ..     204     229 .. 0.91
   6 !   10.1   0.1   9.3e-05      0.55       1      28 [.     251     278 ..     251     280 .. 0.82
   7 !    8.3   0.0   0.00034         2       3      29 ..     291     317 ..     290     318 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.1
      RCC1_2 20 VlcWGsNsdGQ 30
                +++ GsN++ Q
  EPX74740.1  3 LYSLGSNGSYQ 13
                67889998766 PP

  == domain 2  score: 29.1 bits;  conditional E-value: 9.7e-11
      RCC1_2  2 ksvsaGdyHscaLtedGeVlcWGsNs 27
                k++++G++H+++L+  G ++++G+N 
  EPX74740.1 35 KQIACGGNHTLILDQHGQLWACGDNR 60
                79***********************6 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.0057
      RCC1_2   4 vsaGdyHscaLtedGe.VlcWGs 25 
                 ++ G+ +s+ +  d + V+++G 
  EPX74740.1 102 IAVGWEFSVLVEKDRRtVWTCGA 124
                 899******99988556*****4 PP

  == domain 4  score: 15.8 bits;  conditional E-value: 1.5e-06
      RCC1_2   1 VksvsaGdyHscaLtedGeVlcWGsNsdGQ 30 
                 + ++s+ + H + +t+ G+V+++G+   GQ
  EPX74740.1 154 ILDISSSVKHWVCITNKGNVYGCGDGRKGQ 183
                 679**************************9 PP

  == domain 5  score: 5.5 bits;  conditional E-value: 0.0026
      RCC1_2   3 svsaGdyHscaLtedGeV 20 
                 +v++G  +s +L e+G+V
  EPX74740.1 206 KVCCGLQFSAFLQETGRV 223
                 79**************98 PP

  == domain 6  score: 10.1 bits;  conditional E-value: 9.3e-05
      RCC1_2   1 VksvsaGdyHscaLtedGeVlcWGsNsd 28 
                 ++++s++++    L+++G+++++G+ ++
  EPX74740.1 251 IVDISSNWSTLSLLDSNGRIYAFGRGDR 278
                 688899998866799*********9765 PP

  == domain 7  score: 8.3 bits;  conditional E-value: 0.00034
      RCC1_2   3 svsaGdyHscaLtedGeVlcWGsNsdG 29 
                 +++ G+ H ++ t + e + +G+N++G
  EPX74740.1 291 AIAGGSEHNIVRTKNMEAYIYGWNEHG 317
                 7999*********************99 PP

>> Reg_prop  Two component regulator propeller
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.1     0.005        30       9      24 .]      44      59 ..      40      59 .. 0.87
   2 ?    0.3   0.1      0.21   1.2e+03       5      21 ..     159     176 ..     156     179 .. 0.75
   3 ?    2.6   0.1     0.039   2.3e+02       4      19 ..     256     271 ..     253     276 .. 0.69

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.005
                EEEE-TTSCEEEEESS CS
    Reg_prop  9 aileDsdGrlWvGteg 24
                ++  D+ G lW ++++
  EPX74740.1 44 TLILDQHGQLWACGDN 59
                6889********9976 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.21
                 SCEE.EEEE-TTSCEEEE CS
    Reg_prop   5 nnvt.aileDsdGrlWvG 21 
                 ++v  +++ +++G+++ +
  EPX74740.1 159 SSVKhWVCITNKGNVYGC 176
                 56666899999***9855 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.039
                 SSCEEEEEE-TTSCEE CS
    Reg_prop   4 snnvtaileDsdGrlW 19 
                 sn  t  l Ds+Gr++
  EPX74740.1 256 SNWSTLSLLDSNGRIY 271
                 5555555569****98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       383  (0.021362); expected 358.6 (0.02)
Passed bias filter:                      302  (0.0168442); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.45
# Mc/sec: 2358.86
//
Query:       EPX74741.1  [L=228]
Description: ubiquitin conjugating enzyme Ubc6 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.1e-21   75.1   0.0    6.3e-21   74.5   0.0    1.3  1  UQ_con    Ubiquitin-conjugating enzyme
  ------ inclusion threshold ------
       0.16   11.5   0.1       0.21   11.1   0.1    1.1  1  Tti2      Tti2 family


Domain annotation for each model (and alignments):
>> UQ_con  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.5   0.0     7e-25   6.3e-21       1     113 [.       9     120 ..       9     145 .. 0.88

  Alignments for each domain:
  == domain 1  score: 74.5 bits;  conditional E-value: 7e-25
                 HHHHHHHHHHHSTTTTEEEEEEETTEECEEEEEEEB.TTSTTTTEEEEEEEE--TTTTTS--EEEESST-SCTTBETTSBB-CGG..GSTTT--TTSHH CS
      UQ_con   1 rlqkelkelakkkpsgisaklvddenlfewkvlikgpedtpYeggvFklelefpedYPlkpPkvkfvtkifHPnvdksGevcldi..LkeekWspaltl 97 
                 rl+ke+  l++++ + i+ak+  + n+ ew+ +++gp+dtpYegg ++ +l fp++YP+kpP ++++t+      +++ ++cl+   ++ ++W+pa+ +
  EPX74741.1   9 RLMKEYLALQRNPVEYIDAKPAPE-NILEWHYIVTGPPDTPYEGGQYHGTLIFPSEYPFKPPAIRMITPS--GRFQTNTRLCLSFsdFHPKSWNPAWMV 104
                 89*********************7.******************************************975..56778889999653388889******* PP

                 HHHHHHHHHHHHS--T CS
      UQ_con  98 esvllsiqsLlaepnp 113
                 +++l+ ++s++++ + 
  EPX74741.1 105 STILVGLVSFMTSDEI 120
                 **********987655 PP

>> Tti2  Tti2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   2.4e-05      0.21      23     110 ..     133     219 ..     111     223 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 2.4e-05
        Tti2  23 latsileklls.qeseefesilekiLksklrplfsksspktpkitaaGrkaalslplerfdeslsddesrkpWksgdlkaisvlawiir 110
                  a +   k ++ +++++f  i  ++L ++ r ++ +s+ +++++ +a  ++     ++++d++ s+de+  +W +g++  i v+ ++++
  EPX74741.1 133 KAYAKDTKRFNlSNNPKFAAIFPELLDQNRRDIMEQSAASAKANDEAIAQKIT-STPSKSDSNTSKDEE-GKWFKGRWGLIVVVFFALA 219
                 333332223334899*********************77777666666666655.445555666666666.6888899998888888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       717  (0.0399911); expected 358.6 (0.02)
Passed bias filter:                      574  (0.0320152); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.29s 00:00:00.78 Elapsed: 00:00:00.47
# Mc/sec: 1469.49
//
Query:       EPX74742.1  [L=251]
Description: RNA-binding protein Vip1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-07   29.7   0.1    6.7e-07   29.0   0.1    1.4  1  RRM_1       RNA recognition motif. (a.k.a. RRM, RBD, or RNP d
  ------ inclusion threshold ------
       0.11   12.3   0.2       0.11   12.3   0.2    1.6  2  BRCT_assoc  Serine-rich domain associated with BRCT


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.0   0.1   7.4e-11   6.7e-07       1      69 [.       5      69 ..       5      70 .. 0.93

  Alignments for each domain:
  == domain 1  score: 29.0 bits;  conditional E-value: 7.4e-11
                EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1  1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69
                + V+n++ +vte++++++Fs +G++++i+ +++     + +a ++Fe +++ + Al  l+   lg++++
  EPX74742.1  5 VLVKNISLEVTEKQISDFFSFCGKVSNISTFKE---GDTQTAKIQFERPSATKTALL-LQDALLGQNKI 69
                68******************************7...88999**************99.98888888877 PP

>> BRCT_assoc  Serine-rich domain associated with BRCT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.2      0.91   8.1e+03      44      65 ..      73      94 ..      70     104 .. 0.54
   2 ?   12.3   0.2   1.2e-05      0.11      71     132 ..     123     184 ..     113     209 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 0.91
  BRCT_assoc 44 rsdeiLtsdssldeesesnaev 65
                 sd   +s+ssld+  +   ++
  EPX74742.1 73 SSDAPASSSSSLDKGGAGGDQA 94
                4555566777777666553333 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 1.2e-05
  BRCT_assoc  71 vpnevdgesgssekidlvaddpeealieeservsskpvennieDki.FGkTYrRkaslpnlsh 132
                    + d+  g+s k + v +++ + + +++er + k+  n+++ k+    TY+R +sl + ++
  EPX74742.1 123 KGIQLDQSLGVSTKFKGVLESALSSVHSMNERYHVKEKANEVDSKLsISDTYKRTTSLFS-NY 184
                 44578999*************************************95689****999865.44 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (251 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       671  (0.0374254); expected 358.6 (0.02)
Passed bias filter:                      415  (0.0231469); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1811.42
//
Query:       EPX74743.1  [L=315]
Description: Ino80 complex HMG box protein Nht1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.9e-10   39.7   5.6    7.3e-10   39.1   2.4    2.5  2  HMG_box        HMG (high mobility group) box
    1.7e-05   25.3   1.1    1.7e-05   25.3   1.1    3.0  3  HMG_box_2      HMG-box domain


Domain annotation for each model (and alignments):
>> HMG_box  HMG (high mobility group) box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.1       0.1     9e+02      42      60 ..       9      27 ..       7      31 .. 0.87
   2 !   39.1   2.4   8.1e-14   7.3e-10       3      62 ..     188     247 ..     186     252 .. 0.93

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.1
                SHHHHHHHHHHHHHHHHHH CS
     HMG_box 42 lseeeKkkYeekaekekar 60
                +s++e  kY++k + +kar
  EPX74743.1  9 VSKSEEIKYRQKCKDLKAR 27
                7899999*******99998 PP

  == domain 2  score: 39.1 bits;  conditional E-value: 8.1e-14
                 SS--HHHHHHHHHHHHHHHHSTTS-HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHH CS
     HMG_box   3 RplsafflfskeqraklkaenPelknaeiskklgekWkalseeeKkkYeekaekekarye 62 
                 ++ +af  fs++++aklk+e  +lk + ++k l + W+al++e+Kkk+++ a+++ka+ e
  EPX74743.1 188 TNHMAFTYFSSQEKAKLKEEGNTLKGTGLKKLLDDSWNALNDEDKKKFFNGAAEAKAKKE 247
                 5789****************************************************9865 PP

>> HMG_box_2  HMG-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.1     0.067     6e+02      45      66 ..       8      29 ..       5      35 .. 0.86
   2 ?   -3.1   0.2       1.4   1.3e+04      19      38 ..      99     117 ..      96     127 .. 0.65
   3 !   25.3   1.1   1.9e-09   1.7e-05       9      65 ..     191     246 ..     185     255 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.067
                HS-HHHHHHHHHHHHHHHHHHH CS
   HMG_box_2 45 alseeeKekYeekAkedkkryd 66
                a s++e  kY +k k +k+r  
  EPX74743.1  8 AVSKSEEIKYRQKCKDLKARIV 29
                57899999**********9865 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 1.4
                 HHHHHHHT---SSHHHHTGG CS
   HMG_box_2  19 ipelkrkGnpviglaevskl 38 
                 +p+ k++ + ++  ++ sk 
  EPX74743.1  99 QPQNKKR-KSPSTKSDTSKS 117
                 6666666.556666666654 PP

  == domain 3  score: 25.3 bits;  conditional E-value: 1.9e-09
                 -HHHHHHHTTHHHHHHHT---SSHHHHTGGGHHHHHHS-HHHHHHHHHHHHHHHHHH CS
   HMG_box_2   9 nAYalfvqemipelkrkGnpviglaevsklcsekWkalseeeKekYeekAkedkkry 65 
                  A+ +f  +++++lk++Gn + +     kl+ ++W al++e+K+k+ + A e k++ 
  EPX74743.1 191 MAFTYFSSQEKAKLKEEGN-TLKGTGLKKLLDDSWNALNDEDKKKFFNGAAEAKAKK 246
                 59***************65.566778********************99888887764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (315 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2052  (0.114451); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.34s 00:00:00.96 Elapsed: 00:00:00.46
# Mc/sec: 2070.28
//
Query:       EPX74744.1  [L=1195]
Description: mitotic cohesin complex subunit Psm3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      2e-55  187.6  53.6    9.7e-54  182.1  53.6    3.1  1  SMC_N        RecF/RecN/SMC N terminal domain
    8.9e-30  103.4   0.0    3.7e-29  101.4   0.0    2.2  2  SMC_hinge    SMC proteins Flexible Hinge Domain
    1.3e-15   58.0   3.4    9.2e-08   32.2   0.0    3.4  4  AAA_21       AAA domain, putative AbiEii toxin, Type IV TA sy
    1.1e-12   48.4   3.2    1.1e-12   48.4   3.2    4.6  1  AAA_15       AAA ATPase domain
    3.5e-06   27.6  54.1    3.5e-06   27.6  54.1    7.2  1  AAA_23       AAA domain
  ------ inclusion threshold ------
      0.012   15.8   4.1      0.012   15.8   4.1    8.9  8  TMF_TATA_bd  TATA element modulatory factor 1 TATA binding
      0.013   15.2   0.0      0.033   13.9   0.0    1.6  1  AAA_29       P-loop containing region of AAA domain
      0.018   15.1   0.0       0.17   12.0   0.0    2.8  1  MMR_HSR1     50S ribosome-binding GTPase
      0.058   13.6   1.4       0.99    9.7   0.1    3.3  3  Requiem_N    N-terminal domain of DPF2/REQ.
          1    8.9   0.0          1    8.9   0.0    5.1  6  AAA_27       AAA domain
        4.6    7.6   9.5       0.99    9.8   0.3    3.9  3  Img2         Mitochondrial large subunit ribosomal protein (I


Domain annotation for each model (and alignments):
>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  182.1  53.6     6e-57   9.7e-54       1     218 [.       2    1178 ..       2    1180 .. 0.99

  Alignments for each domain:
  == domain 1  score: 182.1 bits;  conditional E-value: 6e-57
                  EEEEEEEESETTEECEEEEEETTSSEEEEEESTTSSHHHHHHHHHHHCTT.TTTTTTCHCCCCCC--BTTCSSTTEEEEEEEEEETTEESSSSSSCE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N    1 vlkrleienFksyagktvilpfsksftaivGpNGSGKsnlldAilFvLGersakklrseklsdlihkskekasvkkaeveitfdnedkklkiekeev 97  
                  ++k+l+i++Fksy++ tvi p+s+++++ivG+NGSGKsn++ Ai+FvLG+ ++++l +e+ ++l+h+   ++ v++a+ve+tf+n+d+++++ k+ev
  EPX74744.1    2 HIKKLVIQGFKSYKDYTVIEPISPHHNVIVGRNGSGKSNFFAAIRFVLGD-DYTHLSREERQALLHE-GPGSTVMSAYVEVTFENSDNRFPTGKSEV 96  
                  59***********************************************5.777************9.9**************************** PP

                  EEEEEEETTSEEEEEETTEEE-HHHHHHHHHCTT-STT........................................................... CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........................................................... RF
       SMC_N   98 sisrrvkrkgeseykingkevtkkevsellesagiske........................................................... 135 
                  +++r++  k++ ey +++k+v+k+ev +llesag+s++                                                           
  EPX74744.1   97 VLRRTIGLKKD-EYSLDRKTVNKSEVINLLESAGFSRSnpyyivpqgrvtsltnakdserlellkevagtqiyenrrsesnkimsetvlksekidel 192 
                  **********9.************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX74744.1  193 leyieerlreleeeknelaayhkkdnerrcleyaiysrehdeintvldaleqdrtstlqrneidsgafieretrieqiksetselqnsinllrlekq 289 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX74744.1  290 qneedytnlikskaamdlqyqqllrqiefskedetskiemlqsleseihgkeseltkvipeyndvvsqvdllnqqilslqnqrrtildkqsrisqfa 386 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX74744.1  387 treerdvwikdqinevsssiriqkkrilelnteieniseslnmktsrkqeiqsalssrgeltaaamakvssvnekkenlidkrkelwreeaklksit 483 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX74744.1  484 enikddlsqseksmsttmdrntstglrsvksisdrlkltgyygplcdlftvdnrfktaveatagnslfhvvvdsdatadqilqvmykenagrvtfmp 580 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX74744.1  581 lnrlrpkpvnypdasdalplvnfleydskyqpafqqvfsktivcpsievasqyarshqlngitlsgdrsdkkgaltggyrdyknsrldalknvkkyq 677 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX74744.1  678 krlsetqanldkvtteidsidqqitnclnelqkaelelkqlerdhaplnmeqvaitqeeveiqgshrrkvqdlhlaklelqtleqqvkdfeeelqse 774 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX74744.1  775 mvemdpkdlkrlkhletqieqlsvdyndmnaklveiesqkvnleyqlntnlylrrdplkmqlgmdnlvdeselsnvkrtiekheaklrkledasrrl 871 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX74744.1  872 dseiqkfvdelqtkekgletleekqheaaakiehesklsernaakrslllarkkecnenikslgvlpeeafvkyvstssnaivkklhkindalkeyg 968 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  EPX74744.1  969 svnkkayeqynnftkqrdslisrredlrksqdsineltmvldqrkdeaiertfkqvaknfseifeklvpagrgelvmskrselsqsleqensmdids 1065
                  ************************************************************************************************* PP

                  ...............................CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHH CS
                  ...............................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  136 ...............................lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreem 201 
                                                 +LSgG+k+L+alaL+fAiq+++pap+ +lDe da+LD+++++++a ++k  sk++Qfi++++r em
  EPX74744.1 1066 qtaqrssidnytgvgirvsfnskddeqlsihQLSGGQKSLCALALIFAIQRCDPAPFNILDECDANLDAQYRSALAAMVKGMSKTSQFICTTFRPEM 1162
                  ************************************************************************************************* PP

                  CCC-SCEEEEEEEETTE CS
                  xxxxxxxxxxxxxxxxx RF
       SMC_N  202 lekadklvgvtkvengv 218 
                  ++ ad+++gv++ +++v
  EPX74744.1 1163 VKAADTFYGVMF-NHKV 1178
                  **********99.5444 PP

>> SMC_hinge  SMC proteins Flexible Hinge Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       8.7   1.4e+04      61      91 ..     286     320 ..     272     324 .. 0.71
   2 !  101.4   0.0   2.3e-32   3.7e-29       2     117 .]     522     634 ..     521     634 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 8.7
   SMC_hinge  61 ldrikqknkadgandkns......gavplidlvevdd 91 
                 l   kq+n++d++n ++s      +++ l+  +e+ +
  EPX74744.1 286 L--EKQQNEEDYTNLIKSkaamdlQYQQLLRQIEFSK 320
                 4..4688888888888777777777777777777765 PP

  == domain 2  score: 101.4 bits;  conditional E-value: 2.3e-32
   SMC_hinge   2 kgvlGrladlievdegyekAveaalgnrlqalvvedeetakkiieflkkknagratflpldrikqknkadgandknsgavplidlvevddelrkalryl 100
                 +g++G+l dl++vd+++++Avea +gn+l+++vv++++ta +i++ + k nagr+tf+pl+r+++k+  ++++ +   a pl++++e+d+++++a++++
  EPX74744.1 522 TGYYGPLCDLFTVDNRFKTAVEATAGNSLFHVVVDSDATADQILQVMYKENAGRVTFMPLNRLRPKPV-NYPDAS--DALPLVNFLEYDSKYQPAFQQV 617
                 69***************************************************************955.555554..7********************* PP

   SMC_hinge 101 lgdtlvvdsldeAeela 117
                 +++t+v++s+++A ++a
  EPX74744.1 618 FSKTIVCPSIEVASQYA 634
                 *************9985 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.0     1e-08   1.6e-05       2      24 ..      28      50 ..      28     113 .. 0.85
   2 ?   -2.5   0.7       2.2   3.5e+03     187     187 ..     332     332 ..     194     453 .. 0.61
   3 ?   -2.3   0.2       1.9     3e+03     165     172 ..     428     435 ..     316     501 .. 0.60
   4 !   32.2   0.0   5.7e-11   9.2e-08     138     296 ..     979    1157 ..     949    1160 .. 0.82

  Alignments for each domain:
  == domain 1  score: 24.9 bits;  conditional E-value: 1e-08
      AAA_21  2 nvliGpNgsGKSnLLdaldllar 24
                nv++G+NgsGKSn++ a++++ +
  EPX74744.1 28 NVIVGRNGSGKSNFFAAIRFVLG 50
                8*******************976 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 2.2
      AAA_21 187 r 187
                  
  EPX74744.1 332 S 332
                 1 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 1.9
      AAA_21 165 rigllnif 172
                 ++ + + +
  EPX74744.1 428 NMKTSRKQ 435
                 33333333 PP

  == domain 4  score: 32.2 bits;  conditional E-value: 5.7e-11
      AAA_21  138 lqfgkaltditsrawsllllldglrkerigllnifadyfgfakekrllqrlvrslklveielsdlgegeeliasvderlrer............... 219 
                  + f k++++++sr ++l++++d++ +    +l+  +d++ +   k+ ++ ++  + +  +  + ++++++ +++++ +++e+               
  EPX74744.1  979 NNFTKQRDSLISRREDLRKSQDSINE-LTMVLDQRKDEAIERTFKQVAKNFSEIFEKLVPAGRGELVMSKRSELSQSLEQENsmdidsqtaqrssid 1074
                  56889999999999999999999988.6666666667777777777777777777777777777777777777777777777777777777777*** PP

      AAA_21  220 ......gvvflengdgqelparelSdGtkrll..alltallralkkgsllliDEpEngLHPkllrrllellkelsrngaQviltT 296 
                          v +  +d+ +l++++lS G+k+l   al+ a+ r ++  ++ ++DE +++L+ +  + l+ ++k  s+  +Q+i+tT
  EPX74744.1 1075 nytgvgIRVSFNSKDDEQLSIHQLSGGQKSLCalALIFAIQRCDPA-PFNILDECDANLDAQYRSALAAMVKGMSK-TSQFICTT 1157
                  *******************************645666666666666.*********************99988888.9******9 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.4   3.2   6.5e-16   1.1e-12       1     216 [.       1     303 [.       1     315 [. 0.58

  Alignments for each domain:
  == domain 1  score: 48.4 bits;  conditional E-value: 6.5e-16
      AAA_15   1 MkIkkikikNFRslkd.vei.dlseeltvliGkNnsGKSsilealdlFlnnkekkn..........................................k 55 
                 M Ikk+ i+ F+s+kd + i ++s+  +v++G+N+sGKS++  a+ + l  ++ +                                            
  EPX74744.1   1 MHIKKLVIQGFKSYKDyTVIePISPHHNVIVGRNGSGKSNFFAAIRFVLGDDYTHLsreerqallhegpgstvmsayvevtfensdnrfptgksevvlR 99 
                 99**************7666358888************************8866657888888888888888888887766666666666666666654 PP

      AAA_15  56 kvikiekedleifeniseskdikIdvef..................................aek.ekakeyektlkskekkkadlllkkkesdlkkti 119
                  +i ++k++++    +  +k+  I++ +                                  +   + ++++++ ++s++++++++l  +k+++l ++i
  EPX74744.1 100 RTIGLKKDEYSLD-RKTVNKSEVINLLEsagfsrsnpyyivpqgrvtsltnakdserlellkE-VaGTQIYENRRSESNKIMSETVLKSEKIDELLEYI 196
                 4444444444443.5555666666666677777777777777777777777776666665531.24556666666666777777777777777777777 PP

      AAA_15 120 kdkklklkknelsdekisvekkkskkelpkekeeklekekeelkidkedlkklikkleeslkkee............elknvlksaiiklllisakRnv 206
                 +++  +l+++++      ++kk +++   ++  +++e+++ ++ +d  ++++++   ++ + + +            +  + l+++i +l+l + +++ 
  EPX74744.1 197 EERLRELEEEKNELA--AYHKKDNERRCLEYAIYSREHDEINTVLDALEQDRTSTLQRNEIDSGAfieretrieqikSETSELQNSINLLRLEKQQNEE 293
                 777777764443333..3334444333333333333333333333333333333322222222222222333332222233444444444444444444 PP

      AAA_15 207 sdedsekkss 216
                 + ++  k++ 
  EPX74744.1 294 DYTNLIKSKA 303
                 4444444444 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6  54.1   2.2e-09   3.5e-06       1     171 [.       5     283 ..       5     497 .. 0.74

  Alignments for each domain:
  == domain 1  score: 27.6 bits;  conditional E-value: 2.2e-09
      AAA_23   1 kLkienfrsfrd.qeidF.skgltlItGpNGaGKTTildAiklaLygetprlsrksgrgfeksdveiesegkvkayveltfenkdgry........... 86 
                 kL i++f+s++d + i+  s+  ++I+G NG+GK+ ++ Ai+++L+ + + lsr++++ + ++ +    ++  +ayve+tfen d+r            
  EPX74744.1   5 KLVIQGFKSYKDyTVIEPiSPHHNVIVGRNGSGKSNFFAAIRFVLGDDYTHLSREERQALLHEGPG---STVMSAYVEVTFENSDNRFptgksevvlrr 100
                 799*******88466***9***********************************998888888887...5678999**********99*********** PP

      AAA_23  87 ................................................................trsiererelskkkgkttkkaklelleideleqfi 121
                                                                                 t++ e++r                    +e+++++
  EPX74744.1 101 tiglkkdeysldrktvnksevinllesagfsrsnpyyivpqgrvtsltnakdserlellkevagTQIYENRR--------------------SESNKIM 179
                 *********************************997777665555555555555555555444433333333....................5555555 PP

      AAA_23 122 sellgskkiilnlilflgqerfeefelkdkke......................................................rleelekeleele 166
                 se + ++++i +l+ ++ +   e +e+k+++                                                       r+e+++ e+ el+
  EPX74744.1 180 SETVLKSEKIDELLEYIEERLRELEEEKNELAayhkkdnerrcleyaiysrehdeintvldaleqdrtstlqrneidsgafieretRIEQIKSETSELQ 278
                 555555555555555554444322222222223333334455552222222222222222222222333333333444555544444444444444444 PP

      AAA_23 167 dekkl 171
                 + ++l
  EPX74744.1 279 NSINL 283
                 44444 PP

>> TMF_TATA_bd  TATA element modulatory factor 1 TATA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   6.8      0.19   3.2e+02      34     101 ..     143     210 ..     139     215 .. 0.83
   2 ?    1.3   5.1      0.24   3.8e+02      15      61 ..     275     321 ..     262     326 .. 0.76
   3 ?   15.8   4.1   7.4e-06     0.012       4      70 ..     320     386 ..     317     404 .. 0.91
   4 ?   -3.8   8.2       9.2   1.5e+04      14      61 ..     420     467 ..     389     491 .. 0.44
   5 ?   -1.1  13.8       1.3   2.1e+03      16      81 ..     703     772 ..     669     778 .. 0.70
   6 ?    3.5   6.6     0.049        80      22      80 ..     744     807 ..     738     818 .. 0.64
   7 ?   -1.7  12.7         2   3.2e+03      16      96 ..     849     930 ..     840     933 .. 0.62
   8 ?   -0.4   0.6      0.79   1.3e+03      29      68 ..     972    1004 ..     946    1029 .. 0.49

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.19
  TMF_TATA_bd  34 elerleaerdeareeivklmkeneelkelkkeleelekeleelqeryetlLellGeksEeveELraDv 101
                  ++++l++ +d+ r e++k ++ ++  ++  +e++++ +e    +e+ ++lLe + e+  e eE ++++
   EPX74744.1 143 RVTSLTNAKDSERLELLKEVAGTQIYENRRSESNKIMSETVLKSEKIDELLEYIEERLRELEEEKNEL 210
                  67789999999999999999999999999999999999999999999999999988887777777665 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.24
  TMF_TATA_bd  15 erlsseirrlEgElaslkeelerleaerdeareeivklmkeneelke 61 
                  ++l+ +i  l  E+++ +e++++l +++ ++  +  +l+++ e  ke
   EPX74744.1 275 SELQNSINLLRLEKQQNEEDYTNLIKSKAAMDLQYQQLLRQIEFSKE 321
                  57888888888888888888888888888888888888877776655 PP

  == domain 3  score: 15.8 bits;  conditional E-value: 7.4e-06
  TMF_TATA_bd   4 tssagpsvqlverlsseirrlEgElaslkeelerleaerdeareeivklmkeneelkelkkeleele 70 
                  +  ++++++++++l+sei+ +E+El+++  e++ + ++ d ++++i++l ++  +  ++++++++  
   EPX74744.1 320 KEDETSKIEMLQSLESEIHGKESELTKVIPEYNDVVSQVDLLNQQILSLQNQRRTILDKQSRISQFA 386
                  56678999********************************************999999999998765 PP

  == domain 4  score: -3.8 bits;  conditional E-value: 9.2
  TMF_TATA_bd  14 verlsseirrlEgElaslkeelerleaerdeareeivklmkeneelke 61 
                  +e++s ++  + + ++++++ l++  +   +a + + ++ ++ e+l +
   EPX74744.1 420 IENISESLNMKTSRKQEIQSALSSRGELTAAAMAKVSSVNEKKENLID 467
                  222222222222222222222222222222222222222222222222 PP

  == domain 5  score: -1.1 bits;  conditional E-value: 1.3
  TMF_TATA_bd  16 rlsseirrlEgElaslkeelerleaerdeareeivklm....keneelkelkkeleelekeleelqerye 81 
                  +   e+++ E El++l+++ + l+ e+ ++++e v++     +++++l+ +k el++le+++++ +e+++
   EPX74744.1 703 NCLNELQKAELELKQLERDHAPLNMEQVAITQEEVEIQgshrRKVQDLHLAKLELQTLEQQVKDFEEELQ 772
                  3334677778888888888888888887777777777655556677777777778888888887777765 PP

  == domain 6  score: 3.5 bits;  conditional E-value: 0.049
  TMF_TATA_bd  22 rrlEgElaslkeelerleaerdeareeivklm.....keneelkelkkeleelekeleelqery 80 
                  rr+  +l+ +k el++le++ ++ +ee+ + m     k+  +lk+l++++e+l+  +++++ ++
   EPX74744.1 744 RRKVQDLHLAKLELQTLEQQVKDFEEELQSEMvemdpKDLKRLKHLETQIEQLSVDYNDMNAKL 807
                  5555666666777777777766666666655511114555667777777777777777777665 PP

  == domain 7  score: -1.7 bits;  conditional E-value: 2
  TMF_TATA_bd  16 rlsseirrlEgElaslkeelerleaerdeareeivklmkeneelkelkkeleelekeleelqer.yetlLellGeksEeveE 96 
                  + + +i + E+ l++l++   rl +e ++  +e+ +  k  e+l+e+++e +   ++ ++l+er   +   ll  k+E +e 
   EPX74744.1 849 NVKRTIEKHEAKLRKLEDASRRLDSEIQKFVDELQTKEKGLETLEEKQHEAAAKIEHESKLSERnAAKRSLLLARKKECNEN 930
                  5666777777777777777777777777777777777777777777666655433333344444044444556677777766 PP

  == domain 8  score: -0.4 bits;  conditional E-value: 0.79
  TMF_TATA_bd   29 aslkeelerleaerdeareeivklmkeneelkelkkelee 68  
                   +++ e++++++++rd++ +   +l k+ ++        +e
   EPX74744.1  972 KKAYEQYNNFTKQRDSLISRREDLRKSQDSI-------NE 1004
                   3344444444444444333222222222222.......22 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0     2e-05     0.033      19      46 ..      23      49 ..      11      55 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 2e-05
      AAA_29 19 idlkgatlltGpsGsGKSTllDAiqalL 46
                i+++   +++G++GsGKS ++ Ai ++L
  EPX74744.1 23 ISPHH-NVIVGRNGSGKSNFFAAIRFVL 49
                55555.89***************99998 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0    0.0001      0.17       3     103 ..      29     216 ..      27     232 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.0001
                 EEEESTTSSHHHHHHHHH.............TSTEEESSSTTSSSSEEEEEEEETTEE...................................EEEEEC CS
    MMR_HSR1   3 aivGrpNvGKStLinalt.............gekaivsdkpgtTrdinegrvklkgke...................................ielvDt 53 
                 +ivGr  +GKS ++ a+              +++a   + pg T    + +v++++++                                   i+l+  
  EPX74744.1  29 VIVGRNGSGKSNFFAAIRfvlgddythlsreERQALLHEGPGSTVMSAYVEVTFENSDnrfptgksevvlrrtiglkkdeysldrktvnksevINLLES 127
                 79***************76677666666543248999***************97764457888888999999999999999999999999999888888 PP

                 GGC.....................................SS..HHHHHHHHHHHHHHHHCTSEEEEEEETTTTCSHHHHHHHHHHHHH CS
    MMR_HSR1  54 pGl.....................................ie..gaseekglgkaflaleeadlillvvdaseeklkpldeeleellee 103
                 +G+                                     +e  +++++k +++++l+ e+ d +l  ++ + ++l+++++el+++ ++
  EPX74744.1 128 AGFsrsnpyyivpqgrvtsltnakdserlellkevagtqiYEnrRSESNKIMSETVLKSEKIDELLEYIEERLRELEEEKNELAAYHKK 216
                 88777777777777777777777777777766666555544443334444799999999999999999997766799999999999766 PP

>> Requiem_N  N-terminal domain of DPF2/REQ.
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.56   9.2e+02      21      46 ..     261     286 ..     257     298 .. 0.62
   2 ?    9.7   0.1   0.00061      0.99       4      41 ..     350     387 ..     349     402 .. 0.89
   3 ?   -1.3   0.0       1.6   2.6e+03       7      21 ..     668     682 ..     664     700 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.56
   Requiem_N  21 aeRklRlpflDsqTgvaqrecelwme 46 
                 +eR++R+  + s+T   q+  +l + 
  EPX74744.1 261 IERETRIEQIKSETSELQNSINLLRL 286
                 56666666666666666666655544 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00061
   Requiem_N   4 sYkdalencskyNsrllaeRklRlpflDsqTgvaqrec 41 
                  Y+d++ +    N+++l  +++R + lD+q+ ++q ++
  EPX74744.1 350 EYNDVVSQVDLLNQQILSLQNQRRTILDKQSRISQFAT 387
                 69********************************9765 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 1.6
   Requiem_N   7 dalencskyNsrlla 21 
                 dal+n +ky +rl +
  EPX74744.1 668 DALKNVKKYQKRLSE 682
                 89**********975 PP

>> AAA_27  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.0   0.00062         1       1      47 [.       1      46 [.       1      69 [. 0.89
   2 ?   -3.0   0.3       2.8   4.6e+03     157     199 ..     234     276 ..     229     280 .. 0.83
   3 ?    5.7   1.2     0.006       9.7     140     198 ..     440     498 ..     431     506 .. 0.80
   4 ?   -2.3   0.4       1.7   2.7e+03     164     199 ..     682     717 ..     667     767 .. 0.62
   5 ?   -0.8   0.7       0.6   9.8e+02     148     199 ..     854     905 ..     833     915 .. 0.71
   6 ?    0.0   0.8      0.33   5.3e+02      85     192 ..     910    1014 ..     898    1027 .. 0.72

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00062
      AAA_27  1 MrlerLdLeryGkftdrsldfsaeeadlhliyGpNEAGKstalrAis 47
                M +++L ++ + +++d ++  +  +++  +i+G N +GKs  ++Ai+
  EPX74744.1  1 MHIKKLVIQGFKSYKDYTVIEP-ISPHHNVIVGRNGSGKSNFFAAIR 46
                8999999999999999998666.789999****************97 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 2.8
      AAA_27 157 slrevleaLeaeadelfkprkskkrainealeeleeakkelre 199
                 ++++vl+aLe+++++  ++++  + a+ e ++++e+ k+e+ e
  EPX74744.1 234 EINTVLDALEQDRTSTLQRNEIDSGAFIERETRIEQIKSETSE 276
                 6789999999999999998888888999999999999888776 PP

  == domain 3  score: 5.7 bits;  conditional E-value: 0.006
      AAA_27 140 aegelgqlLfeasaGlaslrevleaLeaeadelfkprkskkrainealeeleeakkelr 198
                 a    g+l  +a a ++s++e  e+L ++++el++++++ k    + +++l++ +k++ 
  EPX74744.1 440 ALSSRGELTAAAMAKVSSVNEKKENLIDKRKELWREEAKLKSITENIKDDLSQSEKSMS 498
                 555567888899999************************99666667777777777665 PP

  == domain 4  score: -2.3 bits;  conditional E-value: 1.7
      AAA_27 164 aLeaeadelfkprkskkrainealeeleeakkelre 199
                 + +a+ d++ ++  s +++i++ l+el++a+ el++
  EPX74744.1 682 ETQANLDKVTTEIDSIDQQITNCLNELQKAELELKQ 717
                 333334444444444444555555555555444443 PP

  == domain 5  score: -0.8 bits;  conditional E-value: 0.6
      AAA_27 148 LfeasaGlaslrevleaLeaeadelfkprkskkrainealeeleeakkelre 199
                 + + +a l++l++   +L++e +++ ++ ++k++ + + +e+ +ea +++++
  EPX74744.1 854 IEKHEAKLRKLEDASRRLDSEIQKFVDELQTKEKGLETLEEKQHEAAAKIEH 905
                 5555677888888899999999999988888887777777766666666544 PP

  == domain 6  score: 0.0 bits;  conditional E-value: 0.33
      AAA_27   85 aRrkgrkktlldaddqalpeevlaallggldretFealFgLdherLreGGealleaegelgqlLfeasaGlaslrevleaLeaeadelfkprkskkr 181 
                  + r + k++ll a++++ +e++  + lg l +e+F +  + +++++++  +++ +a  e g++  +a   +++ ++ +++L +++++l k++ s + 
  EPX74744.1  910 SERNAAKRSLLLARKKECNENI--KSLGVLPEEAFVKYVSTSSNAIVKKLHKINDALKEYGSVNKKAYEQYNNFTKQRDSLISRREDLRKSQDSIN- 1003
                  5556666677777777666665..558888899999999999999999999999999999999999999999999999999999998888888887. PP

      AAA_27  182 ainealeelee 192 
                  +++  l++ ++
  EPX74744.1 1004 ELTMVLDQRKD 1014
                  44444444333 PP

>> Img2  Mitochondrial large subunit ribosomal protein (Img2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.2      0.24   3.9e+02      48      79 ..     414     445 ..     383     445 .. 0.79
   2 ?    9.8   0.3    0.0006      0.99      20      73 ..     684     749 ..     659     755 .. 0.72
   3 ?   -2.6   0.2       4.4   7.2e+03      19      50 ..     850     881 ..     848     910 .. 0.70

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.24
        Img2  48 leelvkvnevtgkieikGdrveevkkfLeskg 79 
                 le  +++++ ++++++k  r++e+++ L+s+g
  EPX74744.1 414 LELNTEIENISESLNMKTSRKQEIQSALSSRG 445
                 3334788999999***************9987 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.0006
        Img2  20 krggtkkltvirkieGDiaalredLrkaleel............vkvnevtgkieikGdrveevkk 73 
                 +++  k +t+i  i+  i+++ ++L+ka  el             +v  +++++ei+G ++++v++
  EPX74744.1 684 QANLDKVTTEIDSIDQQITNCLNELQKAELELkqlerdhaplnmEQVAITQEEVEIQGSHRRKVQD 749
                 4455677788888888888888888776444223344444444467777**************986 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 4.4
        Img2  19 vkrggtkkltvirkieGDiaalredLrkalee 50 
                 vkr  +k+  ++rk e    +l ++++k++ e
  EPX74744.1 850 VKRTIEKHEAKLRKLEDASRRLDSEIQKFVDE 881
                 66777788888889888888999999999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1195 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2562  (0.142897); expected 358.6 (0.02)
Passed bias filter:                      538  (0.0300073); expected 358.6 (0.02)
Passed Vit filter:                       105  (0.00585643); expected 17.9 (0.001)
Passed Fwd filter:                        55  (0.00306766); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 1.84u 0.43s 00:00:02.27 Elapsed: 00:00:00.61
# Mc/sec: 5902.24
//
Query:       EPX74745.1  [L=508]
Description: atypical/RIO/RIO1 protein kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-74  248.6   0.2    3.2e-74  248.6   0.2    1.8  2  RIO1      RIO1 family
  ------ inclusion threshold ------
      0.014   15.4   0.1        1.9    8.3   0.0    2.3  2  APH       Phosphotransferase enzyme family
       0.18   12.0   0.0       0.42   10.8   0.0    1.5  1  SH3_11    Retroviral integrase C-terminal SH3 domain


Domain annotation for each model (and alignments):
>> RIO1  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  248.6   0.2   5.4e-78   3.2e-74       1     182 [.     146     329 ..     146     335 .. 0.98
   2 ?   -3.9   2.1       1.4   8.5e+03      25      46 ..     473     493 ..     452     505 .. 0.54

  Alignments for each domain:
  == domain 1  score: 248.6 bits;  conditional E-value: 5.4e-78
                 EEEEEEETTTEEEEEEEE-S---SS-HHHHCTTTSTTSTCG--GS-HHHHHHHHHHHHHHHHHHHHHTT--S--EEEEETTEEEEE--E.ETTEEGGBH CS
        RIO1   1 nVyhavsedgkevaiKiyktstteFkkrkkyvsgekrfkdrksktnprklvklwaekEfrnLkrleeagvpvPkpielkrhvlvmefig.edgvaapkl 98 
                 nVyhav+e+gk++a+Ki+kts+++Fk+r++yvsge+rf++ ++k nprk+v++waekE+rnLkr+++ag+p P+p+ lk+hvlvm+f+g ++g+++pkl
  EPX74745.1 146 NVYHAVNEEGKHLAVKIFKTSILVFKDRDRYVSGEFRFRHGYNKRNPRKMVRVWAEKEIRNLKRVYAAGIPSPEPLLLKHHVLVMSFLGdKKGWPYPKL 244
                 7****************************************************************************************99******** PP

                 HHCG.-HHHHHHHHHHHHHHHHHHHHTSTEEESS-STTSEEEETTEEEE--GTTEEETTSTTHHHHHHHHHHHHHHHHHTTC--- CS
        RIO1  99 kdve.eeeeaeelyeevleemrklykeaglvHaDLSeyNvlvdedkvviIDvsQaveldhpnalefLerDveniikfFrrkgvek 182
                 kdv+ + eea++ly +v ++mr++y+ ++lvHaDLSeyN+l++++kv++IDvsQ+ve+dhp ++efL++D+ n+  fF+r  +++
  EPX74745.1 245 KDVDvTAEEATKLYSMVARYMRIMYQVCHLVHADLSEYNMLYHKGKVFLIDVSQSVEHDHPGSFEFLRMDILNVTSFFKRFEADC 329
                 ****889*************************************************************************98775 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 1.4
                 S-HHHHCTTTSTTSTCG--GS- CS
        RIO1  25 Fkkrkkyvsgekrfkdrksktn 46 
                  + rk++v++ek  ++rk+k++
  EPX74745.1 473 KRARKQKVKEEKA-EKRKTKIS 493
                 3333333333333.33333333 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.0   0.00033       1.9       7     104 ..     141     263 ..     139     274 .. 0.71
   2 ?    6.1   0.0    0.0015       8.9     145     192 ..     251     295 ..     236     299 .. 0.66

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00033
                 -.SSCEEEEEEETT.--EEEEE............................E-TTS-HHHHHHHHHHHHHHHHTT-B--B-CTTBS-EEETTEEEEEEE- CS
         APH   7 ggasnrtylvttpa.gryvlrr............................npparaaeeirrevallrlLakagvpvPevlagdtddeeigllfaliey 76 
                  g +  +y+ + ++ +++++++                            np +     +++e + l+ + +ag+p Pe+l        + ++++++++
  EPX74745.1 141 TGKEANVYHAVNEEgKHLAVKIfktsilvfkdrdryvsgefrfrhgynkrNPRKMVRVWAEKEIRNLKRVYAAGIPSPEPLL-------LKHHVLVMSF 232
                 56777788888888458888888888888888888888888877776654333345556679999*****************.......7788999999 PP

                 ---EE-SS...HHHHHHHHHHHHHHHHHHCC CS
         APH  77 vpgrsllr...klsaaqlpellealgeflaa 104
                 ++ +  ++     + +++ e + +l ++ a+
  EPX74745.1 233 LGDKKGWPypkLKDVDVTAEEATKLYSMVAR 263
                 9999999987744555555555555555555 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0015
                 HHHHHHHHHHHHHHH--S.SS-EEEE-SS-SGGGEEEC..TTEEEEE-- CS
         APH 145 leeleeqvlaalaallpg.elptvllHgDlhpgNllvdpddgrvtGviD 192
                 +ee+++ ++ ++a+ ++   +   l+H Dl+  N+l +  +g+v  +iD
  EPX74745.1 251 AEEATK-LYSMVARYMRImYQVCHLVHADLSEYNMLYH--KGKV-FLID 295
                 555555.5555555555544444589************..7777.4666 PP

>> SH3_11  Retroviral integrase C-terminal SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   7.1e-05      0.42      30      53 ..     110     133 ..     105     140 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 7.1e-05
      SH3_11  30 tvlevlnprtvvildhlGnnrtvs 53 
                 t  +vl+prt +il +l nn t+s
  EPX74745.1 110 TSEQVLDPRTRIILLKLINNGTIS 133
                 5668******************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (508 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2115  (0.117965); expected 358.6 (0.02)
Passed bias filter:                      593  (0.0330749); expected 358.6 (0.02)
Passed Vit filter:                        90  (0.0050198); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.68u 0.29s 00:00:00.97 Elapsed: 00:00:00.45
# Mc/sec: 3382.78
//
Query:       EPX74746.1  [L=404]
Description: autophagy associated protein kinase activator Atg17 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-57  195.2  13.4    2.4e-57  194.9  13.4    1.1  1  APG17       Autophagy protein Apg17
    0.00053   20.1   2.7     0.0014   18.7   2.7    1.8  1  TLE_N       Groucho/TLE N-terminal Q-rich domain
     0.0085   15.7   1.5     0.0085   15.7   1.5    2.4  2  MscS_porin  Mechanosensitive ion channel porin domain
  ------ inclusion threshold ------
       0.34   11.2   4.1       0.28   11.4   0.7    2.4  3  BORCS7      BLOC-1-related complex sub-unit 7
        1.3    9.2   5.5       0.44   10.7   0.5    2.7  3  Med2        Mediator complex subunit 2
        4.9    7.6  13.1        3.9    7.9   1.6    3.2  4  CENP-H      Centromere protein H (CENP-H)


Domain annotation for each model (and alignments):
>> APG17  Autophagy protein Apg17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  194.9  13.4     8e-61   2.4e-57       1     396 []       6     371 ..       6     371 .. 0.93

  Alignments for each domain:
  == domain 1  score: 194.9 bits;  conditional E-value: 8e-61
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHIIIIIIIIIIIIIIIIIHHHHHHHHHHHHHHHHHHHHHTSS- CS
       APG17   1 ehllaAkksLseaqtlcqrAnelltsarqeleeavkllakteflrdglkqQlkllekirkslerklekgkeefkdlikeldaanerLektlekLrktkv 99 
                 ++ ++Ak++L+ea +lc +A e+ +++++ l +++k++++++ l +  ++Q++ l++ ++ +++ l+ +++    +  +l++ ++rLe+ l++Lr++  
  EPX74746.1   6 QWTEQAKEALTEARKLCGDAYEYNEASKDCLRNSAKQHQQLNELAKLTASQCARLDSSTSLIKQLLNLVQNHP--TFGQLNDLHDRLESSLKRLRECVL 102
                 7*****************************************************************9888764..5589******************** PP

                 TTS.......STGGGCS--TTTTHHHHHHHHHHHHHHHHHHHHHTTHH..HHHHHHHHHHH-------STCCHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       APG17 100 epsfrpegeektLlDFvdedsveelkealkesidelqaaqkkldssllefdtdlrelkkelsksksksessslipellkelesleeemAslLesLtnHf 198
                 +p++ +e    +L+ Fvd+++ e+lk +l+ ++d + +a++kl++ l+  ++  +  +++l+          +++ l+  +++l+e +A+lL   ++Hf
  EPX74746.1 103 DPALGSEY--PNLYSFVDDAALEDLKTRLRGVTDGVWNAYEKLSGLLE--EDVCERYHTALK--------AISLDFLPPVNNDLAESLADLLLQVAQHF 189
                 ***98888..**********************9999999999999999..777777777773........34456677889****************** PP

                 HHHHHH................S-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH....HHHHHHHHHH CS
       APG17 199 DqcvkAvkltegggalrraaaelseeereelleVlekDaaeledVvkelqerleemekakkllsekkeeiekllsalkkaleeleevgkklpeylaifk 297
                 Dqc++A+  ++g          ls+ e++el+eVl  D++++++V+++l++ lee ++++ ++ e+k++++++ + l ++ eel++  ++l +     +
  EPX74746.1 190 DQCSEALTIYSG----------LSDVEKKELIEVLRYDSNHVPAVLEDLRTGLEETKAYHLTVLEYKQTVDASAKRLEELAEELNK--NQLTNRRH--E 274
                 ******999998..........67889**********************************************************4..55555555..5 PP

                 HHHHHHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSSSBGGGSTTGCC-- CS
       APG17 298 aeeeflerweeekekieekleeleeLrefYegFlsaYdklllEveRRraveekmekilkkarekLeklqeedrerReeFlaevGefLPedlwpglddpp 396
                 a++e+++   ++  +i +  +el +L+ +Y++F++aY+ ll+E++RRra+e++++++++++  kLe+ q+ +++ R +F +++G++LP++lw  + dpp
  EPX74746.1 275 AAHELMSA--HTGLEIPQLAQELIQLERHYTHFAKAYHLLLQEIHRRRAYEKRVRSVVDDLVYKLEQEQQIETKSRIDFCTQYGDYLPQTLWNAVTDPP 371
                 78888888..8999*******************************************************************************999987 PP

>> TLE_N  Groucho/TLE N-terminal Q-rich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   2.7   4.7e-07    0.0014      43     108 ..     286     351 ..     244     357 .. 0.88

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 4.7e-07
       TLE_N  43 lecekLasektemqRhyvmYyemsygLniemhkqteiakrlnaiiaqvlpflsqehqqqvaqaver 108
                 le+ +La+e ++++Rhy  +      L  e+h++    kr+ +++ +++  l+qe+q +  + ++ 
  EPX74746.1 286 LEIPQLAQELIQLERHYTHFAKAYHLLLQEIHRRRAYEKRVRSVVDDLVYKLEQEQQIETKSRIDF 351
                 8999**************666655556668**************************9988777765 PP

>> MscS_porin  Mechanosensitive ion channel porin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.1   5.1    0.0098        29      19      91 ..       5      75 ..       2     100 .. 0.70
   2 !   15.7   1.5   2.9e-06    0.0085      22      91 ..     225     299 ..     217     309 .. 0.88

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.0098
  MscS_porin 19 lqdLeqalnlLdkidkskkkaeelqkaiddaPkelrelqqelealqkkkeeaskeilaklsleeLeqrllqts 91
                +q  eqa + L++++k   +a e+++a +d  + +++  q+l++l+k ++++ +  ++++  + + q l+ ++
  EPX74746.1  5 KQWTEQAKEALTEARKLCGDAYEYNEASKDCLRNSAKQHQQLNELAKLTASQCARLDSST--SLIKQLLNLVQ 75
                66779****************************************333333333333333..33444444444 PP

  == domain 2  score: 15.7 bits;  conditional E-value: 2.9e-06
  MscS_porin  22 LeqalnlLdkidkskkkaeelqkaiddaPkelrelqqeleal.....qkkkeeaskeilaklsleeLeqrllqts 91 
                 Le+    L++++++     e+++++d + k+l+el +el++      + +++++     + l + +L q+l+q +
  EPX74746.1 225 LEDLRTGLEETKAYHLTVLEYKQTVDASAKRLEELAEELNKNqltnrRHEAAHELMSAHTGLEIPQLAQELIQLE 299
                 555556799*******************************99888777788888889999***********9976 PP

>> BORCS7  BLOC-1-related complex sub-unit 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.7   9.5e-05      0.28      14      93 ..       9      97 ..       4     101 .. 0.78
   2 ?   -1.1   0.1      0.79   2.3e+03      81     101 ..     245     264 ..     230     267 .. 0.68
   3 ?   -2.8   0.0       2.5   7.5e+03      55      75 ..     274     294 ..     264     314 .. 0.59

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 9.5e-05
      BORCS7 14 qeSKkeLtervevivn..dissvakqvvkgS.ksseilmkaaksfaqqedaienteesLkkmsll......ttelnyqveaisksikql 93
                +++K+ Lte  + + +  +  +  k  ++ S k +  l++ ak  a q + ++++ + +k++  l      + +ln+ ++ +++s+k+l
  EPX74746.1  9 EQAKEALTEARKLCGDayEYNEASKDCLRNSaKQHQQLNELAKLTASQCARLDSSTSLIKQLLNLvqnhptFGQLNDLHDRLESSLKRL 97
                678999999999998733456789999998747899**************************999566554456666666676666665 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.79
      BORCS7  81 yqveaisksikqleevqeqvk 101
                 y ++ +  s+k+lee+ e+++
  EPX74746.1 245 Y-KQTVDASAKRLEELAEELN 264
                 3.4567788888888888776 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 2.5
      BORCS7  55 faqqedaienteesLkkmsll 75 
                  a++e  +++t   + ++++ 
  EPX74746.1 274 EAAHELMSAHTGLEIPQLAQE 294
                 456666666665555555544 PP

>> Med2  Mediator complex subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.2         1   3.1e+03      17      31 ..      63      76 ..      38     103 .. 0.53
   2 ?   10.7   0.5   0.00015      0.44       4      94 ..     172     261 ..     170     271 .. 0.86
   3 ?   -1.6   0.0         1     3e+03      56      69 ..     328     341 ..     311     347 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 1
        Med2 17 sgemlvqeqlktiql 31
                s+ ++ ++ l+ +q 
  EPX74746.1 63 STSLI-KQLLNLVQN 76
                44433.444444433 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00015
        Med2   4 nkLtqclddiLkvsgemlvqeqlktiqldsnvvtGfnnqlqksLkekikkFhsiLDdleiklndaksyveqlveikkekeeekekeeeerq 94 
                 n L ++l d+L   ++ + ++  +     s +    +++l+++L+   ++  ++L dl + l+++k y  ++ e k+  +   ++ ee ++
  EPX74746.1 172 NDLAESLADLLLQVAQHF-DQCSEALTIYSGLSDVEKKELIEVLRYDSNHVPAVLEDLRTGLEETKAYHLTVLEYKQTVDASAKRLEELAE 261
                 668889999998888888.888888888999999999999*************************************99998888866544 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 1
        Med2  56 siLDdleiklndak 69 
                 s+ Ddl+ kl++ +
  EPX74746.1 328 SVVDDLVYKLEQEQ 341
                 68888888888765 PP

>> CENP-H  Centromere protein H (CENP-H)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.9     0.005        15       8      75 ..      28      94 ..      23     101 .. 0.77
   2 ?   -0.7   0.2      0.61   1.8e+03      20      71 ..     247     259 ..     180     267 .. 0.59
   3 ?    1.8   0.4       0.1     3e+02      20      61 ..     247     267 ..     217     286 .. 0.46
   4 ?    7.9   1.6    0.0013       3.9       3      73 ..     267     342 ..     266     350 .. 0.76

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.005
      CENP-H  8 rdelssellklsqelrelqeeltevekenlrlkrknrelaaellelakekesekeklkeelekleael 75
                 +e+s+++l+ s++ ++ ++el+++++++++    + +l+++ll l +++ +   +l++  ++le+ l
  EPX74746.1 28 YNEASKDCLRNSAKQHQQLNELAKLTASQCARLDSSTSLIKQLLNLVQNHPTFG-QLNDLHDRLESSL 94
                57899**************************************87776655444.3444444444444 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.61
      CENP-H  20 qelrelqeeltevekenlrlkrknrelaaellelakekesekeklkeelekl 71 
                 q + +                                        +++le+l
  EPX74746.1 247 QTVDA---------------------------------------SAKRLEEL 259
                 11111.......................................22222222 PP

  == domain 3  score: 1.8 bits;  conditional E-value: 0.1
      CENP-H  20 qelrelqeeltevekenlrlkrknrelaaellelakekesek 61 
                 q +                        a++l+ela+e ++ +
  EPX74746.1 247 QTVD---------------------ASAKRLEELAEELNKNQ 267
                 2222.....................22222222222222222 PP

  == domain 4  score: 7.9 bits;  conditional E-value: 0.0013
      CENP-H   3 plieqrdelssellklsq..elrelqeeltevekenlrlkrknrelaael.lelakekesek..eklkeeleklea 73 
                 +l ++r e++ el+  ++  e+ +l +el ++e+   +  ++ + l++e+ ++ a ek+ ++  ++l  +le+ ++
  EPX74746.1 267 QLTNRRHEAAHELMSAHTglEIPQLAQELIQLERHYTHFAKAYHLLLQEIhRRRAYEKRVRSvvDDLVYKLEQEQQ 342
                 5789999*******9999778889**************************55777777666666444433433333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (404 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1588  (0.0885716); expected 358.6 (0.02)
Passed bias filter:                      685  (0.0382063); expected 358.6 (0.02)
Passed Vit filter:                        70  (0.00390429); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.60u 0.32s 00:00:00.92 Elapsed: 00:00:00.47
# Mc/sec: 2606.87
//
Query:       EPX74747.1  [L=236]
Description: protein-S isoprenylcysteine O-methyltransferase Mam4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-28   97.7   0.6    7.3e-28   96.8   0.6    1.4  1  ICMT      Isoprenylcysteine carboxyl methyltransferase (ICMT)
    2.9e-10   40.5   1.2    2.9e-10   40.5   1.2    2.2  2  PEMT      Phospholipid methyltransferase
    7.3e-06   25.6   1.6    1.4e-05   24.7   1.6    1.6  1  NnrU      NnrU protein
     0.0071   15.9   0.9     0.0094   15.5   0.9    1.4  1  DUF1295   Protein of unknown function (DUF1295)


Domain annotation for each model (and alignments):
>> ICMT  Isoprenylcysteine carboxyl methyltransferase (ICMT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.8   0.6   1.6e-31   7.3e-28       2      93 ..     122     214 ..     121     215 .. 0.97

  Alignments for each domain:
  == domain 1  score: 96.8 bits;  conditional E-value: 1.6e-31
        ICMT   2 lllvllaqalrlvvmatlGeiwttrvai..lpdhklvksglykylrHPnYllfvilelatllLlcnakltalvllalvalllf.vRikeEekaLa 93 
                 +++++ +q+lr+++m+++G+++++ +a   + +h lvksg+y+y+rHP+Y++f++++l+t+ Ll n    +l+ +a+v++ +f +Ri  Ee +L+
  EPX74747.1 122 ITMIISGQLLRSYAMVHAGKSFSHHIASekKREHSLVKSGVYHYVRHPSYVGFFVWALGTQFLLQNT--FSLIAFAIVLWDFFsKRIAGEEMYLI 214
                 6789************************88889**********************************..************************98 PP

>> PEMT  Phospholipid methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0      0.89     4e+03      10      31 ..      69      90 ..      61      94 .. 0.72
   2 !   40.5   1.2   6.5e-14   2.9e-10       5     106 .]     120     221 ..     116     221 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.89
        PEMT 10 ialglllvlssiealgefgtfy 31
                ++l++  ++++  ++g+f+ ++
  EPX74747.1 69 FVLNNGAAYWIAMTIGVFEYYF 90
                5666777777777777777665 PP

  == domain 2  score: 40.5 bits;  conditional E-value: 6.5e-14
        PEMT   5 lGlllialglllvlssiealgefgtfygdfFlelmd..klvtsGiYrylnnPeyvgstlgflGlaLitgsaaglllallvllvylialkfvEephlaki 101
                 l++ +i+ g+ll+  ++ + g+          e+++  +lv+sG+Y+y+++P yvg ++  lG+ ++ ++  +l++ ++vl+ ++  ++  Ee +l k 
  EPX74747.1 120 LAITMIISGQLLRSYAMVHAGKSFSHHIAS--EKKRehSLVKSGVYHYVRHPSYVGFFVWALGTQFLLQNTFSLIAFAIVLWDFFSKRIAGEEMYLIKF 216
                 678999999999999999999888877766..333356**********************************9999999998899999999******** PP

        PEMT 102 Ygkre 106
                 +g+++
  EPX74747.1 217 FGEEY 221
                 **976 PP

>> NnrU  NnrU protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   1.6   3.2e-09   1.4e-05      60     149 ..     101     203 ..      75     234 .. 0.74

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 3.2e-09
        NnrU  60 vllWeppawlrhlalllmlvafillaaallpgnplsvglka..............dlaetgivritrHPmllgvaiWAlaHllanGdlasvllfgglll 144
                 ++l  p+ +l ++++l++ +a+ +++++ l    ++v + +              +l + g+++++rHP  +g+ +WAl+  +   +++s++ f+ ++l
  EPX74747.1 101 PRLHFPSCALSWIPWLFTRLAITMIISGQLLRSYAMVHAGKsfshhiasekkrehSLVKSGVYHYVRHPSYVGFFVWALGTQFLLQNTFSLIAFA-IVL 198
                 56667777777778888777777777777655543333333566677777777888899*********************999999999999996.556 PP

        NnrU 145 walvg 149
                 w  ++
  EPX74747.1 199 WDFFS 203
                 66655 PP

>> DUF1295  Protein of unknown function (DUF1295)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.9   2.1e-06    0.0094     149     235 .]     151     228 ..      65     228 .. 0.62

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 2.1e-06
     DUF1295 149 pankgkvldsGLwrysRHPNYfgealiWwglflialealeglealaiagpllltlllvfvsgipllEkkalkkykdkeeyreYqkkt 235
                  + +  +++sG+++y RHP Y g +++ +g   +  ++ + +     ++ +l  ++  +++     E    k ++  eey+ Y++kt
  EPX74747.1 151 KKREHSLVKSGVYHYVRHPSYVGFFVWALGTQFLLQNTFSLI----AFAIVLWDFFSKRIA---GEEMYLIKFFG--EEYKDYRRKT 228
                 33334599*************997777677665555543332....222222222222222...22333344444..7777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (236 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       540  (0.0301188); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1679.09
//
Query:       EPX74748.1  [L=409]
Description: aspartate aminotransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-73  248.3   0.0    1.5e-73  248.1   0.0    1.0  1  Aminotran_1_2  Aminotransferase class I and II
  ------ inclusion threshold ------
      0.024   15.1   0.1        1.4    9.5   0.0    2.4  2  TetR_C_28      Tetracyclin repressor-like, C-terminal domain


Domain annotation for each model (and alignments):
>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  248.1   0.0   1.7e-77   1.5e-73       2     362 ..      31     400 ..      30     401 .. 0.94

  Alignments for each domain:
  == domain 1  score: 248.1 bits;  conditional E-value: 1.7e-77
                    EEEESSSSSTTSTTSS.HHHHHHHHHHHHHHHHHTSTTST-BTTHHHHHHHHHHHHHC..TCTTCHTTGGEGEEEESHHHHHHHHHHHHHH...HT CS
  Aminotran_1_2   2 dvinLgsneylgdsgk.ptlpevakaekegalaggtlneygpidglpeleealakflg..rseklklkreaavvvgsGagaliealifllk...ln 91 
                     ++n+++++y++ +gk + lp+v+ka+     + + ++ey pi g  ++ +a a+ l+  +++ lk++r  +++  sG+ga+  a+ f+++     
     EPX74748.1  31 SKVNMSIGAYRDNNGKpWILPVVKKATEIVEKDPNFNHEYMPIAGFGQFTKAAAEILFkpNEHLLKEDRICSIQSVSGTGANFMAARFIAEhyaRK 126
                    589*************999998888887688999999*********************99999*******************99999999855557 PP

                    TT-EEEEEESS-THHHHHHHHTTSEEEEEEBEETTTTEE-HHHHHHHHTTHHCTTETEEEEEEESS-TTT--B--HHHHHHHHHHHHHTTEEEEEE CS
  Aminotran_1_2  92 pgdeilvpdptyasyknilrlsggevvryplyseedfhldlealeealkeapegnkktkvilvesphNPtGtvatleeleklldlakkynlllfvD 187
                     g ++++++pt++ + + ++   ++v +yp++++++++ d+e+  e  k+apeg++   ++l++++hNPtG ++t+e+++ + +   ++++l+++D
     EPX74748.1 127 NGAAVYISNPTWPVHRTLWESVNVKVETYPYWDAKNRRFDFEGTMEVMKSAPEGSI---FLLHACAHNPTGMDPTREQWKSMFEALLARKHLVVFD 219
                    8999****************************************************...************************************* PP

                    ETTTTCBSSSS..HTHHHHGGSTTSTTEEEEEESSSTTSSGGG-EEEEEEEH.......HHHHHHHHHHHHHTS..SHHHHHHHHHHHHHHHHHHH CS
  Aminotran_1_2 188 eaYagfvfgsl..davatranveeepnllivgslsKafGlaGeRvGyilgna.......avvsqlrklsrpfls..ssllqaavaaalsdallkqs 272
                     aY+gf++g+l  d +a+  +++   + ++++s++K++Gl+GeR G++ ++a       ++ s l  ++r+ +s  ++++++++aa+ls+++l ++
     EPX74748.1 220 IAYQGFASGDLdrDSWALNEFAKFNKDFFVCQSFAKNMGLYGERTGCLHYVAknntvksKMQSVLCLIQRNSISnpPAYGARIAAAILSNPELFEQ 315
                    ***********6666665444444455*********************999999*999988888889999999999******************** PP

                    ...HHHHHHHHHHHHHHHHHHHHHHS....TEEEECCSCSSEEEEEETHHCHHHHHHH..HHHTCTEEEEEGGGGTSTTEEEEECTTS-HHHHHHH CS
  Aminotran_1_2 273 ...eleemrqrlqkrrkelrdeLael....glkvlasqsgmflltdlsaetakelskk..LleevgvyvtpgtsftvpgrlRitvAglteeeleel 359
                       +l +m +r++++r++lrd+L  l     ++++++q+gmf++t+l+++      ++  ++e++++y ++        ++Ri++Agl++++++++
     EPX74748.1 316 wkeDLRTMSSRINEMRRHLRDSLVTLktpgTWDHITEQIGMFSFTGLTPS------QVqfCQEKYHLYFSA--------NGRISMAGLNSSNVDHV 397
                    ***********************999************************......77779999*******........9**************** PP

                    HHH CS
  Aminotran_1_2 360 vea 362
                    ++a
     EPX74748.1 398 AKA 400
                    997 PP

>> TetR_C_28  Tetracyclin repressor-like, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.015   1.4e+02      20      49 ..     181     210 ..     169     216 .. 0.78
   2 ?    9.5   0.0   0.00015       1.4      21      49 ..     300     328 ..     285     350 .. 0.79

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.015
                 HHHHHHHGGGSHHHHHHHHHHHHHHS--TT CS
   TetR_C_28  20 laallaalaedpellepwrewyrrwlerle 49 
                 +  ll a+a++p  ++p re+ ++ +e+l 
  EPX74748.1 181 SIFLLHACAHNPTGMDPTREQWKSMFEALL 210
                 567899999999999999998888877665 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00015
                 HHHHHHGGGSHHHHHHHHHHHHHHS--TT CS
   TetR_C_28  21 aallaalaedpellepwrewyrrwlerle 49 
                 a + aa++++pel e w+e++r    r+ 
  EPX74748.1 300 ARIAAAILSNPELFEQWKEDLRTMSSRIN 328
                 56789*****************9988887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (409 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       641  (0.0357521); expected 358.6 (0.02)
Passed bias filter:                      598  (0.0333538); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.45
# Mc/sec: 2702.59
//
Query:       EPX74749.1  [L=533]
Description: atypical/ABC1/ABC1-B protein kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-30  106.1   0.3    2.4e-30  105.1   0.3    1.5  1  ABC1      ABC1 family
     0.0078   16.2   0.0       0.89    9.4   0.1    2.4  2  APH       Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.028   14.5   0.0      0.078   13.1   0.0    1.7  1  KH_5      NusA-like KH domain


Domain annotation for each model (and alignments):
>> ABC1  ABC1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.1   0.3     4e-34   2.4e-30       2     119 .]     171     290 ..     170     290 .. 0.98

  Alignments for each domain:
  == domain 1  score: 105.1 bits;  conditional E-value: 4e-34
        ABC1   2 elgkkleeiFaefdeePiAaASiaqVhrAklksgeeVavKvqrpgvkkriksDlellkllakllkkflkelrldleelvdefskslleEldferEAkna 100
                 +++++ ee+Fa++++++ A+ASiaqVh+A+l sge+VavKvq+p+v+k++++Dl ++k ++ +++k++ ++   l  +vd +s++l++E++f  EA+++
  EPX74749.1 171 QYNRPAEEVFASIEKTASASASIAQVHEATLWSGEKVAVKVQKPSVSKQMNWDLLVYKCMMYVYDKWIFHIP--LYFTVDYVSERLRSEINFVVEAEAT 267
                 67899*******************************************************************..************************* PP

        ABC1 101 ekfrenfaklk....evkvPkvy 119
                    r+ +++++    +v+vPkvy
  EPX74749.1 268 RSSRDAINSTNflkgNVYVPKVY 290
                 *********9999989*****98 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.1   0.0    0.0063        38      38      85 ..     271     314 ..     257     334 .. 0.74
   2 !    9.4   0.1   0.00015      0.89     169     192 ..     343     367 ..     338     373 .. 0.80

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.0063
                 HHHHHHHHHHHHTT-B--B-CTTBS-EEETTEEEEEEE----EE-SS..H CS
         APH  38 rrevallrlLakagvpvPevlagdtddeeigllfalieyvpgrsllr..k 85 
                 r+   +  +L ++ v+vP+v++     e +g    + e+++g +l++  +
  EPX74749.1 271 RDAINSTNFLKGN-VYVPKVYD-----ELSGEKIMVTEWIDGIPLYNqeA 314
                 5555555666666.99******.....88888899**********99431 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00015
                 E-SS-SGGGEEEC....TTEEEEE-- CS
         APH 169 lHgDlhpgNllvd..pddgrvtGviD 192
                 +H+D+hpgN++v+   ++++v  ++D
  EPX74749.1 343 VHCDPHPGNIVVRkvGRQPQV-VILD 367
                 8************88666666.4666 PP

>> KH_5  NusA-like KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   1.3e-05     0.078      28      63 ..     284     319 ..     268     323 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.3e-05
        KH_5  28 srikavsseLkgekidvvewseDlaefianalsPae 63 
                  ++ +v +eL+geki+v ew + +  + ++als a 
  EPX74749.1 284 VYVPKVYDELSGEKIMVTEWIDGIPLYNQEALSNAG 319
                 57889*****************99999999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (533 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       628  (0.0350271); expected 358.6 (0.02)
Passed bias filter:                      509  (0.0283898); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.30s 00:00:00.86 Elapsed: 00:00:00.44
# Mc/sec: 3626.43
//
Query:       EPX74750.1  [L=429]
Description: hypothetical protein SOCG_02232 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-76  256.0   0.2    2.8e-76  255.5   0.2    1.2  1  UPF0300   Uncharacterised protein family (UPF0300)


Domain annotation for each model (and alignments):
>> UPF0300  Uncharacterised protein family (UPF0300)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  255.5   0.2   1.6e-80   2.8e-76       2     212 .]     150     358 ..     149     358 .. 0.99

  Alignments for each domain:
  == domain 1  score: 255.5 bits;  conditional E-value: 1.6e-80
     UPF0300   2 lkkfeelfkelseflekgniplsvLihhvmLYdyYpeelkdalWkAvevyvseqvssgkytklhvkaaqkklgdiRlyLvkpediyvvknssdWiaisn 100
                 lk++++lf++l+e+l++g +p+svLihhvmL+++Yp+++++ lW Av +y+s+  ++++ +kl + a+q++lg+iR+yL++p+diy++k+++d++a+++
  EPX74750.1 150 LKSHRSLFNHLCEYLRAGPVPISVLIHHVMLFQFYPPAIQECLWIAVDHYLSS--RQNAQSKLLKLALQNRLGCIRMYLIDPNDIYALKEKKDCVAVAC 246
                 799**************************************************..999***************************************** PP

     UPF0300 101 knFqcyiqleekleekklksekskieelasvaeseeelgWLllllsigsnasafPihaYlnakkkllesklpesllllrkeDellfqdkeeieeleell 199
                 +nF +y+ql+ +l+e +l++e   +e+++++a+se++++WL++++++g+n++afPih Y+n+k++++e ++pes l+l+++D+++f++++  + + +++
  EPX74750.1 247 SNFLSYLQLQLPLCEGSLPYELRGFEAMLHSASSEADIAWLSMMHCVGNNGHAFPIHIYMNTKDTVFEGRVPESGLFLYDTDAVIFKKDSFLRGFYDFC 345
                 *************************************************************************************************** PP

     UPF0300 200 kelledlakcesf 212
                 ++ll dl+kc+++
  EPX74750.1 346 NQLLLDLCKCRQY 358
                 **********996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (429 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       630  (0.0351386); expected 358.6 (0.02)
Passed bias filter:                      284  (0.0158403); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.23s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 3008.13
//
Query:       EPX74751.1  [L=134]
Description: endosulphine family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.3e-25   86.9   0.3    2.5e-24   85.2   0.0    1.8  2  Endosulfine  cAMP-regulated phosphoprotein/endosulfine conser


Domain annotation for each model (and alignments):
>> Endosulfine  cAMP-regulated phosphoprotein/endosulfine conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.2   0.0   1.4e-28   2.5e-24       1      71 [.      11      81 ..      11      90 .. 0.90
   2 ?   -0.1   0.1     0.058     1e+03      55      75 ..      91     111 ..      81     115 .. 0.71

  Alignments for each domain:
  == domain 1  score: 85.2 bits;  conditional E-value: 1.4e-28
  Endosulfine  1 dlsklspeelklyklyGkLPtkkdllskklq.eRkYFDSgDYAlskagvaksqkaktglgskhPspertpei 71
                 d++klspee+kl++lyG+LP++kdll +klq  RkYFDSgDYAl+kag+a+ +   t +g++ Pspe +p+ 
   EPX74751.1 11 DITKLSPEEQKLFRLYGRLPQRKDLLVQKLQqGRKYFDSGDYALNKAGKAS-DAGITCIGKEIPSPETIPHR 81
                 689*************************99846***************965.56669************996 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.058
  Endosulfine  55 ktglgskhPspertpeikqrs 75 
                  + ++ +k+P+  +++e+++r 
   EPX74751.1  91 EPSIHVKRPTDSAPSEVSSRR 111
                  446778888888888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       341  (0.0190195); expected 358.6 (0.02)
Passed bias filter:                      243  (0.0135535); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 1021.94
//
Query:       EPX74752.1  [L=446]
Description: pyruvate dehydrogenase phosphatase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-42  145.7   0.0    2.8e-42  145.1   0.0    1.2  1  PP2C      Protein phosphatase 2C
    0.00071   19.3   0.0     0.0015   18.2   0.0    1.5  1  PP2C_2    Protein phosphatase 2C


Domain annotation for each model (and alignments):
>> PP2C  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.1   0.0   3.2e-46   2.8e-42      13     235 ..      96     367 ..      87     385 .. 0.87

  Alignments for each domain:
  == domain 1  score: 145.1 bits;  conditional E-value: 3.2e-46
                 SSHHEEEECCCCTCTTCCCCCCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHCHTTH...........HHHHHHHHHHHH.HHHHHHHH......... CS
        PP2C  13 ksmedahislanlesssgkssvsffavfdghggseaakyarehleeilksqksfeele...........kleqalrksfla.dtdeelks......... 90 
                 +++ed h+ +   ++  ++++++f +vfdgh g  ++ y r+hl +++     ++ l+            +e+ l ++f + d  +++++         
  EPX74752.1  96 DPCEDDHVESV--SKDIDDENWYFWGVFDGHSGWNTSLYLRQHLVPVVVDELRKTALTamqnsacpsalSYERSLCNAFENlDNHIVHENiatvfknpk 192
                 67888888555..566789**************************55555555555555677888888*888888888888777777777777887755 PP

                 HHHH.....C.HCCT-EEEEEEEEEETTE..EEEEEESS-EEEEEETTEEE....EECS---STTSHHHHHHHHHTT--EEE.CCEEETTTBSBSB-EE CS
        PP2C  91 skan.....t.epsksGstavvalirgtk..lyvAnvGDSravLcrkgnak....keltedHkpsdedEreRIeeaggsvsn.gegrvngsLavsRalG 176
                 s  +       +p  sGs+a+++ ++ ++  l+vA +GDSrav++ ++ ++    + l++d+++++ dE++R+e +++     +++r++g L  sRa+G
  EPX74752.1 193 S--MqnaarLlLPAVSGSCALLTAYSAKSktLQVACTGDSRAVMGEQNSNGswnaVPLSRDQTGANLDEAARLEVEHPGETVlRNNRILGRLMPSRAFG 289
                 1..234556679*********9998887779***********************************************99999**************** PP

                 -GGGTCCCC..................CCSTSB---EEEEEEE-TT.EEEEEEE-HHHHTTSHHHHHHHHHHHHHHHH CS
        PP2C 177 Dlelkpket..................eeqlvsaePdvtsvkltee.defliLacdGlwdvlsdqeavdlvrdelekk 235
                 D ++k                      ++++v+a P+v++vk++++ ++fli+a+dGlwd +s++ av+lv ++++++
  EPX74752.1 290 DARFKWSRDvserlhreyfsaapipvkSPPYVTAIPEVETVKIDSKkQKFLIMASDGLWDTMSSERAVELVGQWINSE 367
                 *****855599****************99**********************************************974 PP

>> PP2C_2  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   1.7e-07    0.0015       7     193 ..      93     364 ..      90     376 .. 0.79

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 1.7e-07
      PP2C_2   7 rrglpcqDala....vwtdsggsll.aVaDGaGSakrSerGariaveavvealaelleseeee............eeallraleaailadv........ 80 
                 +++ pc+D++       +d++++++  V DG+   + S    + +v +vv  l++++ ++++               +++++l ++i   v        
  EPX74752.1  93 ASNDPCEDDHVesvsKDIDDENWYFwGVFDGHSGWNTSLYLRQHLVPVVVDELRKTALTAMQNsacpsalsyersLCNAFENLDNHI---Vheniatvf 188
                 67899***9999887777888999955*******99999999999999999999999777777778888888444333333333333...244578888 PP

      PP2C_2  81 ....lkeeaeaq..daelkdyatTllaav.vtpdeivalqiGDGaivvrd..rdgevql..lgepdsgeyanqttfltsedaeeel............. 155
                         ++a     ++ + +++ll a  ++ +++ ++  GD+ +v+    ++g++++  l+ +++g    + + l  e ++e+              
  EPX74752.1 189 knpkS--MQNAArlLLPAVSGSCALLTAYsAKSKTLQVACTGDSRAVMGEqnSNGSWNAvpLSRDQTGANLDEAARLEVEHPGETVlrnnrilgrlmps 285
                 77432..333331355999**********66667788*********8876556799976447778889999999*****99999999999********* PP

      PP2C_2 156 ........................................rirrlk..ledgdalllmTDGlanslrdeerfaelleell 193
                                                         +++++k   ++ + l++++DGl + ++ +er  el+ +++
  EPX74752.1 286 rafgdarfkwsrdvserlhreyfsaapipvksppyvtaipEVETVKidSKKQKFLIMASDGLWDTMS-SERAVELVGQWI 364
                 ****************************************888888757788889999****99996.555567666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (446 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       388  (0.0216409); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 3273.44
//
Query:       EPX74753.1  [L=163]
Description: N-acetylglucosaminyldiphosphodolichol N- acetylglucosaminyltransferase Alg13 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.3e-31  108.5   0.0    3.7e-31  108.3   0.0    1.0  1  Glyco_tran_28_C  Glycosyltransferase family 28 C-terminal dom
  ------ inclusion threshold ------
      0.096   12.0   0.0       0.12   11.7   0.0    1.1  1  Herpes_BTRF1     Herpesvirus BTRF1 protein conserved region


Domain annotation for each model (and alignments):
>> Glyco_tran_28_C  Glycosyltransferase family 28 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.3   0.0   4.1e-35   3.7e-31       3     154 ..       4     150 ..       2     160 .. 0.93

  Alignments for each domain:
  == domain 1  score: 108.3 bits;  conditional E-value: 4.1e-35
                      EEEE-SSSHHHHHCCCTSHHHHHHHH.HHHHCHHHCCT-EEC---STT.-TTTTCEEEEEESSSSHHHHHHHH-EEEECS-CHHHHHHHHTT-- CS
  Glyco_tran_28_C   3 lVtGGSqgaeaLnelvlselkllelk.srelqvlhqtGkreleevkik.veeltlkvevfefidkmaeaikaadLvIsRAGagtiaEllalgkp 94 
                      +Vt+GS+ ++ L++ vl ++++ +l  ++ +q++ q+G++ ++   ++ v++ +  ++ f++++++ ++i ++++vIs+AGag+i+++l++ kp
       EPX74753.1   4 FVTVGSTRFDELVSSVLNADTQYQLVqHGITQLIVQYGNGREAFGTPEpVNGIS--ISGFDYAPEIGSYIDSSSVVISHAGAGSILQCLRAKKP 95 
                      9********************999987899**********99999998677775..************************************** PP

                      EEEE--TT....S-HHHHHHHHHHHHHHSSEEEE-STTCHHHHHHHHCCS---S---SSC CS
  Glyco_tran_28_C  95 lIlvplpeaaenhqdnNakelekagaalvleqkeltpekLeeallelaaeklrlaekska 154
                      lI+vp+++    ++dn++ el +++a l+++ ++   ++L ++l++l+  +l+++++ + 
       EPX74753.1  96 LIVVPNES----LMDNHQLELGNKLASLNYLVTCS-YRNLPQGLEALFRTQLEPFPEPEY 150
                      ********....***********************.**************9999988766 PP

>> Herpes_BTRF1  Herpesvirus BTRF1 protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.3e-05      0.12      93     160 ..      87     159 ..      62     163 .] 0.82

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.3e-05
  Herpes_BTRF1  93 limtrsqnslrlvPeldikklqhLlLKHvl..Lksl...gLenivqdFealygselepvtekeakaFekllee 160
                   l   r++  l++vP+ ++   ++L L   l  L++l     +n  q  eal+  +lep  e e  aF+++l++
    EPX74753.1  87 LQCLRAKKPLIVVPNESLMDNHQLELGNKLasLNYLvtcSYRNLPQGLEALFRTQLEPFPEPEYSAFRNVLND 159
                   455699999**************999655433555422278999*************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       331  (0.0184617); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.27s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 1134.41
//
Query:       EPX74754.1  [L=470]
Description: aromatic aminotransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.9e-22   77.9   0.0    9.9e-22   77.6   0.0    1.1  1  Aminotran_1_2    Aminotransferase class I and II
    2.8e-05   23.1   0.0    4.6e-05   22.4   0.0    1.2  1  Aminotran_MocR   Alanine-glyoxylate amino-transferase
     0.0022   17.4   0.0     0.0084   15.5   0.0    1.8  2  DegT_DnrJ_EryC1  DegT/DnrJ/EryC1/StrS aminotransferase family


Domain annotation for each model (and alignments):
>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.6   0.0   1.6e-25   9.9e-22      69     362 ..     127     459 ..      97     460 .. 0.84

  Alignments for each domain:
  == domain 1  score: 77.6 bits;  conditional E-value: 1.6e-25
                    EGEEEESHHHHHHHHHHHHHHHTTT-EEEEEESS-THHHHHHHHTTSEEEEEEBEETTTTEE-HHHHHHHHTTHHCTTETEEEEEEESS-TTT--B CS
  Aminotran_1_2  69 aavvvgsGagaliealifllklnpgdeilvpdptyasyknilrlsggevvryplyseedfhldlealeealkeapegnkktkvilvesphNPtGtv 164
                      +++++G +++++++ ++l ln+gd ilv + t++s  ++ r +g+ vv++ ++   + ++  e+l++ l++ + gnk++ +  + s +NPtG+ 
     EPX74754.1 127 WDILLTTGNTQGLDMCLRML-LNRGDSILVEKYTFPSALQAMRPMGLNVVSVDMD---KNGMLPESLDNILSNWKDGNKPRVLYTIPSGQNPTGST 218
                    3799****************.********************************55...77999****************9999999********** PP

                    --HHHHHHHHHHHHHTTEEEEEEETTTTCBSSSS..HTHHH................HGGSTTSTT..EEEEEESSSTTSSGGG-EEEEEEEH... CS
  Aminotran_1_2 165 atleeleklldlakkynlllfvDeaYagfvfgsl..davat................ranveeepn..llivgslsKafGlaGeRvGyilgna... 237
                    ++ e  ek+++la+k+ ++++ De Y  + +++   +++a+                   +  +++  ++ + slsK   ++G R+G+i++++   
     EPX74754.1 219 LSVERKEKIYALAQKHDFIIIEDEPYYYLQMDEYqhKPEAVdpkftneefvknlitsF--LHIDVDgrVIRMDSLSKV-VAPGSRIGWITAQPlfi 311
                    ******************************9977544444499999999999988542..333333569********6.68**********99888 PP

                    ....HHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS....TEEEECCSCSSEEEEEETHHCHHHHHHH.. CS
  Aminotran_1_2 238 ....avvsqlrklsrpflsssllqaavaaalsdallkqseleemrqrlqkrrkelrdeLael....glkvlasqsgmflltdlsaetakelskk.. 323
                        ++ +++ + +++ +s++llqa+  ++ +d  l   +l++ r  + +rr  l  ++++       +++a+++gmf + +++++ a +++++  
     EPX74754.1 312 erslRYTETASQNASG-ISQALLQALFQTWGHDGYLA--WLKNIRFSYTERRNALLYAMDKYlpksICSYIAPEAGMFIWFEVDKA-AYKFADQgk 403
                    8554444444444443.56788888888888876665..********************9889998899****************9.666666666 PP

                    ............HHHTCTEEEEEGGGGTS......TTEEEEECTTS-HHHHHHHHHH CS
  Aminotran_1_2 324 ............Lleevgvyvtpgtsftv......pgrlRitvAglteeeleelvea 362
                                 +e  g +v  g+ f v      + ++R+t+A     e e ++e+
     EPX74754.1 404 siaeieseihadAIED-GANVACGNWFVVdssindKIFFRVTFAYAELHEFEIAIER 459
                    6667777888889**9.9***********99*99888******99999999999887 PP

>> Aminotran_MocR  Alanine-glyoxylate amino-transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.0   7.7e-09   4.6e-05     142     349 ..     168     391 ..     152     408 .. 0.77

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 7.7e-09
                     HHHT-EEEEEEEETTEE-HHHHHHHHHC..-.TTEEEEEE-SSS-TTT-----HHHHHHHHT---SSTT-EEEEE-TTSS-BS...SSSS---.. CS
  Aminotran_MocR 142 eelGielltvdlqddGpdvdaveklvae..d.asvkGilavpkysnptGetiseevarrlaalkaaapdfrifaddayavhdl..vaeedkda.. 229
                     + +G+++++vd++++G   ++++++ ++  d    + ++++p   nptG+t+s e+  ++ al     df i  d+ y   ++  + ++++++  
      EPX74754.1 168 RPMGLNVVSVDMDKNGMLPESLDNILSNwkDgNKPRVLYTIPSGQNPTGSTLSVERKEKIYALA-QKHDFIIIEDEPYYYLQMdeYQHKPEAVdp 261
                     5689************87777777665422414567899*********************9995.578*******99864333112222222122 PP

                     .........-HHHHHHHHT-TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHHC-S---HHHHHHHHHHHHH..STHHHHHHHHHHHHH CS
  Aminotran_MocR 230 .........nivalardaGhpdrafvlastskitfaGaGvafvassedniawlkkylGlqsiGpdkveqlrhvkflkd..yeGlealmrdhaeli 313
                              n+++   +     r + + s sk+   G+ ++ +++ +  i    +y+   s     + q+    +++    +G  a +++ +   
      EPX74754.1 262 kftneefvkNLITSFLHIDVDGRVIRMDSLSKVVAPGSRIGWITAQPLFIERSLRYTETASQNASGISQALLQALFQTwgHDGYLAWLKNIRFSY 356
                     23333222277777777777889**************************************9999999998877777511469999999999888 PP

                     HHHHHHHHHHHHHHHTTTSSEEE---SBSS-EEEEE CS
  Aminotran_MocR 314 apkfeavlevleaelggaevatwteprGGyfisldt 349
                     + + +a+l ++++ l  + + ++  p+ G fi +++
      EPX74754.1 357 TERRNALLYAMDKYLP-KSICSYIAPEAGMFIWFEV 391
                     8888999888888775.7899999999999998765 PP

>> DegT_DnrJ_EryC1  DegT/DnrJ/EryC1/StrS aminotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   1.4e-06    0.0084      46      97 ..     134     184 ..     128     190 .. 0.87
   2 ?   -1.3   0.0      0.17     1e+03     129     144 ..     226     241 ..     224     243 .. 0.91

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.4e-06
                      SHHHHHHHHHHHTTTTTT-EEEEESSS-THHHHHHHHTT-EEEEE-B-TTTS CS
  DegT_DnrJ_EryC1  46 sGtaAlhlaLralgvgpgdeVIvpsltFvatanavlelgakpvfvDvdpdty 97 
                        t++l + Lr l +++gd ++v ++tF +  +a + +g+++v vD+d++ +
       EPX74754.1 134 GNTQGLDMCLRML-LNRGDSILVEKYTFPSALQAMRPMGLNVVSVDMDKNGM 184
                      4589999999987.6779******************************8865 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.17
                      HHHHHHHHCT-EEEEE CS
  DegT_DnrJ_EryC1 129 alkaiaakhglkvieD 144
                      ++ a+a+kh+ ++ieD
       EPX74754.1 226 KIYALAQKHDFIIIED 241
                      6889***********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (470 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       364  (0.0203023); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.29s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 3096.05
//
Query:       EPX74755.1  [L=2245]
Description: acetyl-CoA/biotin carboxylase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   7.5e-261  867.5   0.0   9.6e-261  867.1   0.0    1.1  1  ACC_central      Acetyl-CoA carboxylase, central region
   5.6e-184  612.4   0.0   7.3e-184  612.0   0.0    1.1  1  Carboxyl_trans   Carboxyl transferase domain
    7.7e-52  175.9   0.1    1.6e-51  174.8   0.1    1.5  1  CPSase_L_D2      Carbamoyl-phosphate synthase L chain, ATP bi
    6.2e-28   97.6   0.1    1.2e-27   96.6   0.1    1.5  1  Biotin_carb_N    Biotin carboxylase, N-terminal domain
    6.5e-20   71.2   0.0    3.7e-19   68.8   0.0    2.4  2  Biotin_carb_C    Biotin carboxylase C-terminal domain
      1e-15   57.3   0.2    2.3e-15   56.2   0.2    1.7  1  Biotin_lipoyl    Biotin-requiring enzyme
    0.00038   20.1   0.0    0.00078   19.0   0.0    1.5  1  Dala_Dala_lig_C  D-ala D-ala ligase C-terminus
     0.0065   16.7   0.3      0.017   15.3   0.1    1.7  2  GxGYxYP_N        GxGYxY sequence motif in domain of unknown f
  ------ inclusion threshold ------
      0.037   14.1   0.0       0.27   11.3   0.0    2.4  3  ATP-grasp_3      ATP-grasp domain
       0.11   12.0   0.0       0.22   11.1   0.0    1.4  1  ATP-grasp        ATP-grasp domain


Domain annotation for each model (and alignments):
>> ACC_central  Acetyl-CoA carboxylase, central region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  867.1   0.0  5.4e-264  9.6e-261       1     733 []     745    1482 ..     745    1482 .. 0.95

  Alignments for each domain:
  == domain 1  score: 867.1 bits;  conditional E-value: 5.4e-264
                   EESXCCCXXXXEBXXSXXXXXX-SS.STTSCHHHHHHHHCHHHHHHHHT-SHTTTCCHHHHHHHHHHTSTCHHHHHHHHHHCCCTTTS-HHHHHHH CS
  ACC_central    1 eLDDpskVkkaepFegqlpelgsptsvvgekphqrlaallsaleniLaGYdnqakiketlkeLievLrdpeLPllelqevlsalsgrlPakleksl 96  
                   +LDDps+Vk+a pF+gqlp++g+p+ + g+kp qr+++ll++l +iL+GYdnq ++++t +e+ievLrdpeLP++e+++  sal +r+P  l+k +
   EPX74755.1  745 TLDDPSRVKHALPFNGQLPKFGDPQ-IAGNKPCQRYHQLLNILLDILKGYDNQIILNSTYNEIIEVLRDPELPFSEWSSYYSALVSRMPPALDKLF 839 
                   69***********************.********************************************************************** PP

                   HHHHHHHHHC..T..SS--HHHHHHHHHHHCTT-TTTTTTTTHHHHSHHHHHHHCCCTTCCHHHHHHCCCCCCCHHHHHHHHHT.ST..-HHHHHH CS
  ACC_central   97 rkelekaasnitsvlaeFPakqlrkildsflaeltkkadrevlealvqplvqlverYrnGlkghelsvvlsLLeeYlevEklFqdgs..reedvvl 190 
                    +++eka+++  +  +eFPakql+  l+++++ ++  + +++l+++++pl+++++ Y++Glk+he+ vv+s+LeeY++vE+lF+     reedv l
   EPX74755.1  840 VSIIEKARAR--K--TEFPAKQLELGLQTYCEGQKL-SVTQQLKQQIAPLIDVINDYKDGLKVHEYRVVRSILEEYYNVERLFSG-PnkREEDVTL 929 
                   ****999999..6..79****************876.68999*****************************************95.459******* PP

                   HHHHH-STCHHHHHHHHHHHHTHHHHHHHHHHHHHHCHCCCCHTCCCCCCCHHHHHCCCT--STTTHHHHHHHHHHHHHHSSHHHHHHHHHHHHHH CS
  ACC_central  191 kLReknkddlakVvdivlShsqvskKnkLilalldelkpekpssselakelrevLkkLasLesketskVaLkArevLiqaklPsleerknqmesil 286 
                   +LR++nkd+++kV++++lShs++ +Kn+L++++ld +k   + s+ ++ +++++L+kL++L+s++t+kV+LkAre+Li++++Psl+er +qme+il
   EPX74755.1  930 RLRDENKDNVDKVIALALSHSRIGSKNNLLITMLDLIK--LEPSTFVSLYFNDILRKLTDLDSRATAKVSLKARELLISCAMPSLSERFSQMEHIL 1023
                   **************************************..4444469************************************************* PP

                   HHHHSBSSTTSS-...SS--HHHHHHHHT-SS-SHHHHCCCCCSSSHHHHHHHHHHHHHHHTTTSEEEEEEEEESS.STCEEEEEEE-T---TCGC CS
  ACC_central  287 kssvdesgygesk...repslevlkeLidsettvfDvLpsfFyhsdevvrlaalevYvrraYraYelksiqhheeeesplivewqFklpsshseek 379 
                   k sv+es+yg+s+   r p+le+lkeLids++tvfDvLp+fF h d++v+laalevYvrraYraY + ++++h e+++p++++w+F+l+ s+++ +
   EPX74755.1 1024 KTSVVESHYGDSEfahRPPNLEILKELIDSKYTVFDVLPAFFCHPDPWVSLAALEVYVRRAYRAYAVLELNYHVENDTPFVISWRFQLRASSTPGQ 1119
                   ************9**9*************************************************************************9996666 PP

                   SSS--......SSSSS-B--TT-EEESSTTTS--S-SSSS--EEEEEEEESSCCGHHHHHHCHHCTS--.---------....-----------EE CS
  ACC_central  380 sasss......stsssesesskriasvsdlsslsskseeepkrtGvmvafksledleealdevleefee.skksesseekeeeeeesssseepinv 468 
                   +as        s+s+s +++ kr++s+sdls +++k+++ep r+G++va++++++le++l+ ++e+++  +++ +   + ++ee +s   +e++nv
   EPX74755.1 1120 GASGAngllpsSSSPSLENENKRLQSYSDLSWYVNKNDSEPFRFGAVVAADNFDQLETNLALAIERLPLaRNTFNAGLTLNNEEPSSAPLQELTNV 1215
                   6555567777788888899999*********************************************98644444334444555667788999*** PP

                   EEEEECETTT-SCCCCCCCCHHHHHHCCCHHHHTTEEEEEEEE--T..S---EEEEEET..........TTEEECTTCTS-CCCHHHCTCCCGTTE CS
  ACC_central  469 lnvairsaenaddeellekleeilkelkeeLeaagvrrvTfivgrk..geyPkyfTFre........rdeykEdeiiRhiEPalafqLELnrLsnf 554 
                   lnva++s+++ +d+++++kl+++l e++++L +++vrr+T+i gr+  +  P+yfT+r+        +  y Ede iRhiEPalafqLEL+rLsnf
   EPX74755.1 1216 LNVALTSTNDLEDSAIVDKLSSVLGEFRDDLLEHNVRRITVIGGRHnkSAHPSYFTYRAssdsfeheTVRYVEDERIRHIEPALAFQLELGRLSNF 1311
                   *******************************************9954699*********99999888778************************** PP

                   EEEEE--SSTTEEEEEEEESS-T....T-EEEEEEEEE-BSS--TTS-HHCHHHHHHHHHHHHHHHHHHH...C--TTBSSEEEEEEEEEEESS-H CS
  ACC_central  555 dikpvptenrqiHlYeavakeeekkevtdkRfFvRaiirhsdlrdkeasaeyliseaerlllealdeLEvaskkeakrtdlnHiFlnfvpeveldp 650 
                   di+pv+++n++iH+Y a+ak+ +    +dkRfF+Ra++r+++lrd++++aeylise++rl++++ld+LEv   ++  +tdlnHiF+nf+p + l p
   EPX74755.1 1312 DIEPVFIDNHNIHVYRATAKNMS----SDKRFFTRALVRPGRLRDEIPTAEYLISETHRLINDILDALEV---ISPDETDLNHIFINFLPAFGLAP 1400
                   ***********************....*******************************************...999******************** PP

                   HHHHHHCCCHHHHHHHHHHHTTEEEEEEEEEEC-TTT-SEEEEEEEEEETTSSCEEEEEEEEEE-TT.SSEEEEESST-STTS CS
  ACC_central  651 eeveeavrsflerygkRlwrLrVlqaEirivirlsetgkaiplRlvitnesGyvlkielYkEvkdektgevvfksigkkgplh 733 
                   ++ve+a+++fler+g+RlwrLrV+ aEiri++++++t++ +plR++i+n+sG+v++ielY+Evk+e+ ++++fksig++g++h
   EPX74755.1 1401 KQVEAALGGFLERFGRRLWRLRVTAAEIRIICTDPKTNTLFPLRVIISNVSGFVVNIELYAEVKTEN-NSWIFKSIGQPGSMH 1482
                   *******************************************************************.**************9 PP

>> Carboxyl_trans  Carboxyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  612.0   0.0  4.1e-187  7.3e-184       1     494 []    1580    2135 ..    1580    2135 .. 0.97

  Alignments for each domain:
  == domain 1  score: 612.0 bits;  conditional E-value: 4.1e-187
                      SSCTTCEEEEEEEEHTTSGGGEBEHHHHHHHHHHHHHHHHHT..EEEEEEEESBETTEEHHHHTTEEEEESSTTSGGGCEE...ECHHHHHHH CS
  Carboxyl_trans    1 kehprGkltareridllldpgsFgeledlffhrvtelgrkkklprdgvvtgsGaviGravevvaqdktvlggslgpakgek...llkaqeeai 90  
                      +e+p+G++++++++d+++++gsFg+ ed ff +vtel r++++pr +++++sGa+iG+a+e+++ ++++++   +p+kg++   l+++++e++
      EPX74755.1 1580 PEYPNGRKLIIIANDITYQIGSFGPREDNFFFKVTELSRQRGVPRLYLAANSGARIGVADELIPLFNVAWNNVNSPEKGFEylyLTPEVQERL 1672
                      69*******************************************************************************999999999999 PP

                      HH...............TEEEEEEEEE-ES.SSGHHSSHHHHHHHHHHHHHHHHHHHCS-EEEEESSEEETHHHHHHHHTSEEEEETTEEEEE CS
  Carboxyl_trans   91 ka...............gepligindsgGa.egriqegveslrgsGkifgenskasgeIpqislvtgrcaGggaYlpalgdrvimveetskif 167 
                      ++               ge +++i+ ++G+ eg   +gve+lrgsG i+g +s+a+++I++++lvt+r++G+gaYl++lg+r+++ve+ ++i+
      EPX74755.1 1673 DKqdtktihterietesGEVRYKITAIIGSgEG---LGVECLRGSGLIAGVTSRAYNDIFTCTLVTCRAVGIGAYLVRLGQRAVQVEG-QPII 1761
                      999***************************888...****************************************************.**** PP

                      SSTHHHHHHHHSSCC-SSCHHHHSHHHHTTTTSSSEEESSHHHHHHHHHHHHTTS-SSTTSGGSS----ECSSGSSSH..HCS-CTTTS---H CS
  Carboxyl_trans  168 ltGpdvikkvlgreevtseelgGatqhmtksGvahltaeddeealelirkllsylPkkasnnresaPivetadepdrdlieivPdnakkpyDv 260 
                      ltG+++++kvlgre+++s+ ++G+tq+m+++G++hlta+dd++++++i+++lsy+P+k++n   ++P+ +++d++drd +e++P+  +  yD+
      EPX74755.1 1762 LTGAPALNKVLGREVYNSNLQLGGTQVMHRNGISHLTAQDDFDGISKIVNWLSYIPDKRNN---PVPVSPSSDPWDRD-VEYYPN--QSGYDP 1848
                      ********************************************************99999...*************8.******..9***** PP

                      HHHHHCEEC..........TTC-EEESTTSSTTEEEEEEEETTEEEEEEEE--S....................EEETTEE-HHHHHHHHHHH CS
  Carboxyl_trans  261 reviarlvd..........egeFlEikegyAktvVvGfArlgGipvGvvAnetr....................veaGqvlfidsavKaarfi 323 
                      r++i +++d          +g+F+E++ g+AktvVvG+ArlgGip+Gv+A+etr                    +eaGqv++++sa+K+a++i
      EPX74755.1 1849 RWLIDGKEDedlylygmfdKGSFQETLDGWAKTVVVGRARLGGIPIGVIAVETRtientlpadpanpssteqnlMEAGQVWYPNSAFKTAQAI 1941
                      ********************************************************************************************* PP

                      HHHHH.TT--EEEEE-BSEE--SHHHHHTTHHHHHHHHHHHHHT--S-EEEEE-T..EEEHHHHHTTTGGGSTTTTE.EETTT-EEESS-HHH CS
  Carboxyl_trans  324 rlcda.enlPlviladvrGflvGqrqeyggilkhGaklvdalaeakvPkitvilr..kayGGayvvmdskingadlv.aawptariaVlgpeg 412 
                      +++++ e+lPl+ila++rGf++Gqr++++++lk+G+++vdalae+k+P++++i++  +++GG++vv+d++in++++  +a++++r++Vl+peg
      EPX74755.1 1942 NDFNHgEQLPLFILANWRGFSGGQRDMFNEVLKYGSYIVDALAEYKQPVFVYIPPysELRGGSWVVVDPTINDKQMEmYADEESRAGVLEPEG 2034
                      *************************************************************************96548*************** PP

                      HHHHHSHHHHHHHHHHH.........HHHHHH.............HHHHHHHHHHHHHHHHHHHHHHHHHTTSSHHHHHHTTSSSEEEHGGGH CS
  Carboxyl_trans  413 aveilfrkekaaaemer.........kdlaae.............rkkklkeyeeellnpyvaaargfaDavidpsetraklvialelewkka 483 
                      +v+i+fr+ek  + m+r              +              k +l e+e++l+++y++++++faD++++  ++ ak v ++ l+w++a
      EPX74755.1 2035 MVSIKFRREKLLSLMRRcdeqyaalqD----KlnqkdlspdelstVKVQLMEREQKLMPIYQQISIHFADLHDRVDRMVAKKVVRQPLKWTNA 2123
                      *****************8866655541....15556777788888************************************************ PP

                      H.HHHHHHHHHH CS
  Carboxyl_trans  484 r.klparkrrni 494 
                      r ++++r+rr++
      EPX74755.1 2124 RrFFYWRLRRRL 2135
                      *********985 PP

>> CPSase_L_D2  Carbamoyl-phosphate synthase L chain, ATP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  174.8   0.1   8.9e-55   1.6e-51      22     209 ..     207     390 ..     193     392 .. 0.96

  Alignments for each domain:
  == domain 1  score: 174.8 bits;  conditional E-value: 8.9e-55
                  SSBSSHHHHHHHHHHH-SSEEEEETTCCTTTTEEEESSHHHHHHHHHHHHHHHHHHHSTS-EEEEE--SSSEEEEEEEEEETTS-EEEEEEEEECCEC CS
  CPSase_L_D2  22 apvetleealaiakeigyPviikaafglGGkGmrvarneeelaelvkkalaeakaafgnkqvlvekslkgpkeiEvevlrDakgnvitvcerenslql 119
                  a ++++e+ +a+a++igyPv+ika+ g+GGkG r +++++++++++++ lae +     + v+v k   + +++Ev++l+D++gn i ++ r++s+q+
   EPX74755.1 207 ACINSAEDGVAVAEKIGYPVMIKASEGGGGKGIRQVTSSQHFTHAYQQVLAELP----GSPVFVMKLAGQARHLEVQILADQYGNNISLFGRDCSVQR 300
                  34799*********************************************9996....789************************************* PP

                  TCCCCEEEES-SS--HHHHHHHHHHHHHHHHHHT-EEEEEEEEEEETTTTEEEEEEEESS--CCHHHHHHHHS--HHHHHHHHHTT--GC CS
  CPSase_L_D2 120 rtqkvievAPsqtLtdeerqalreaavkvvrevgvvgagtveflldpkskeyyviEvNtRlsvesalaekaTGldlvkeaakialgekLe 209
                  r+qk+ie+AP  +  +++++++++aav++ + vg+ +agt+e+l++p+++++ ++E+N+Rl+ve++ +e++ G++l ++++++a+g++L+
   EPX74755.1 301 RHQKIIEEAPVTVAPPNTFREMERAAVRLGELVGYASAGTIEYLYEPETDKFHFLELNPRLQVEHPTTEMVSGVNLPAAQLQVAMGIPLH 390
                  ****************************************************************************************97 PP

>> Biotin_carb_N  Biotin carboxylase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.6   0.1   6.8e-31   1.2e-27       2     110 .]      36     157 ..      35     157 .. 0.94

  Alignments for each domain:
  == domain 1  score: 96.6 bits;  conditional E-value: 6.8e-31
                    --EEEE---HHHHHHHHHHHHHT.........T-EEEEEEEGG..GTTSHHHHHSSEEEEEESSTTCCGGG-HHHHHHHHHHTT-SEEE--SSTTT CS
  Biotin_carb_N   2 ikkvlianrGeiAvriiravrel.........gietvavysee..danslhvreadeavelgpasasesYlniekivkaakesgadavhpGyGfls 86 
                    i+++lian+G +Av+ ir++r++         +i+++++++++  + n+ ++r+ad++ve++++s++++Y+n+e iv++a++ +++av+ G+G++s
     EPX74755.1  36 ITSILIANNGIAAVKEIRSIRKWayetfnnerAIKFTVMATPDdlKVNADYIRMADQYVEVPGGSNNNNYANVELIVDVAERMKVHAVWAGWGHAS 131
                    789*****************************9********994446788********************************************** PP

                    T-HHHHHHHH..HTT-EESSS-HHHH CS
  Biotin_carb_N  87 Enaefaeave..eagivfiGPsaeal 110
                    En++++e+++  +++ivfiGP+ +a+
     EPX74755.1 132 ENPRLPEMLAasKQKIVFIGPPGSAM 157
                    *******99855699*******9987 PP

>> Biotin_carb_C  Biotin carboxylase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.8   0.0   2.1e-22   3.7e-19       2     107 ..     434     540 ..     433     541 .. 0.99
   2 ?   -2.6   0.0       3.3     6e+03       8      33 ..     676     701 ..     671     712 .. 0.78

  Alignments for each domain:
  == domain 1  score: 68.8 bits;  conditional E-value: 2.1e-22
                    EEEESEETTTTTEE--CE-SEEE---STTEEEEE---TT-EE-TTS-SEEEEEEEEESSHHHHHHHHHHHHHT-EEES.S-BSHHHHHHHHH-HHH CS
  Biotin_carb_C   2 aRinaEdpeknflpssGkvtelelpegpgvRvdsgveegsevspyyDsllaKlivhgetreealarlrraLaelrieG.vktnieflrailedeef 96 
                    +Ri++Edp ++f pssG ++ l++ ++ +v+ + +v +   ++++ Ds ++++++ +++re+  + +  aL+el i+G ++t++e+l ++le+ ef
     EPX74755.1 434 CRITSEDPGEGFKPSSGMIKDLNFRSSSDVWGYFSVGTAGGIHEFADSQFGHIFAFADSREATRKSMIVALKELSIRGdFRTTVEYLVRLLETGEF 529
                    9*********************************************************************************************** PP

                    HHT---TTTCC CS
  Biotin_carb_C  97 akgeldtkfle 107
                    a++e++t++l+
     EPX74755.1 530 AHNEFTTAWLD 540
                    **********8 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 3.3
                    ETTTTTEE--CE-SEEE---STTEEE CS
  Biotin_carb_C   8 dpeknflpssGkvtelelpegpgvRv 33 
                    dp++   ps+Gk+ ++ + + ++++ 
     EPX74755.1 676 DPTQLRTPSPGKLVRFLVETDEHIKA 701
                    7888889******9999887777765 PP

>> Biotin_lipoyl  Biotin-requiring enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.2   0.2   1.3e-18   2.3e-15       2      72 ..     679     743 ..     678     744 .. 0.97

  Alignments for each domain:
  == domain 1  score: 56.2 bits;  conditional E-value: 1.3e-18
                    EEEESSSEEEEEE.ECSESSSTTCEE-TTSEEEEEECTTEEEEEEBSSSEEEEEESSTTTEEE-TTCEEEE CS
  Biotin_lipoyl   2 eiksPmiGesveegvvevlvkvGdkVkagqvlaeveamKmemeieapkaGvvkeilvkeGdtvevgdllak 72 
                    ++++P++G++v+     +lv++ +++kag+ +aeve+mKm m++ a ++G+v+ i+++ G+++ +gd+l +
     EPX74755.1 679 QLRTPSPGKLVR-----FLVETDEHIKAGEAYAEVEVMKMIMPLVATEDGTVQLIKQP-GASIGAGDILGI 743
                    899*********.....*****************************************.*********976 PP

>> Dala_Dala_lig_C  D-ala D-ala ligase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.0   4.3e-07   0.00078      29      95 ..     216     285 ..     195     359 .. 0.85

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 4.3e-07
                      HHHHHHC-SSEEEEESSSSTTTTEEEESSGGGHHHHHHHHHTT..-SCEEEEE--.ESEEEEEEEEETSS CS
  Dala_Dala_lig_C  29 ekveeelgypvfVKpareGSSvGvskveseeelkeaieeafky..dekvlvEeai.egreievavlgnek 95 
                       +v e++gypv++K+++ G   G+ +v+s +++++a ++ +     + v+v +   ++r +ev +l ++ 
       EPX74755.1 216 VAVAEKIGYPVMIKASEGGGGKGIRQVTSSQHFTHAYQQVLAElpGSPVFVMKLAgQARHLEVQILADQY 285
                      57899********************************99776523678999999999********98654 PP

>> GxGYxYP_N  GxGYxY sequence motif in domain of unknown function N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.1   9.5e-06     0.017      96     191 ..      41     135 ..      33     151 .. 0.81
   2 ?   -3.3   0.0       4.8   8.6e+03     143     173 ..    2171    2201 ..    2157    2207 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 9.5e-06
                 HHHTT---EEEE-TT..--HHHHHHHHGGGS-SSEEEE--TT--SSSHHHHHHHT-EEE----TT....---HHHHHHHHTS-TT-EEEE-TTS.HHHH CS
   GxGYxYP_N  96 akelglkkelqDlrgkfeayawaldeyadklnkklivllspdkkaelrDYaiasklfvfwldskke...eetsllkkilskmpkgaivlGWgpdsEgag 191
                 +++ g+   ++ +r      +wa+++++++   k++v ++pd     +DY+ ++   v    ++++   ++ +l+ ++ ++m+  a+  GWg +sE+  
  EPX74755.1  41 IANNGIA-AVKEIRS---IRKWAYETFNNERAIKFTVMATPDDLKVNADYIRMADQYVEVPGGSNNnnyANVELIVDVAERMKVHAVWAGWGHASENPR 135
                 5677887.8888998...99*********9999999999988677789**98877776555555555899***********************998765 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 4.8
                  HHHHHHHT-EEE----TT.---HHHHHHHHT CS
   GxGYxYP_N  143 rDYaiasklfvfwldskkeeetsllkkilsk 173 
                  +D+ +a++++++w++++ e+ t+  +++ s+
  EPX74755.1 2171 EDWDTADRSVITWIEENSETLTKHTQELKSH 2201
                  6999999999999999987656655555555 PP

>> ATP-grasp_3  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0         4   7.2e+03      87     126 ..      78     117 ..      72     119 .. 0.87
   2 ?   11.3   0.0   0.00015      0.27      28     159 ..     220     362 ..     210     364 .. 0.59
   3 ?   -2.1   0.0         2   3.5e+03      52      79 ..     845     875 ..     806     889 .. 0.70

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 4
                  EEEEEEEEEEET....TEEEEEEES----HHHHHHHHHHH CS
  ATP-grasp_3  87 lvlavnrqliekaekefvyaGnvtpietelkeevvelaee 126
                   +l vn  +i +a + +   G++ + ++ + e +v++ae+
   EPX74755.1  78 DDLKVNADYIRMADQYVEVPGGSNNNNYANVELIVDVAER 117
                  67999*****9999999999**999999999999999987 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 0.00015
                  S--SSSEEEEESS-------B--SS--TTE.......EEEE---SEEEEEEEEE.SSSEEEEEE.EEEEEET.............TEEEEEEES---- CS
  ATP-grasp_3  28 eeeekklvvKprdGaggesvrvveekeeaeaaieevelvqefieGkplSvsllsdgekvlvlav.nrqliekaeke.........fvyaGnvtpiete 115
                  e+  +++ +K ++G+gg+++r v   ++ + a ++  ++ e ++G+p+ v  l+ + + l + +  +q+ ++ ++               + +p+   
   EPX74755.1 220 EKIGYPVMIKASEGGGGKGIRQVTSSQHFTHAYQQ--VLAE-LPGSPVFVMKLAGQARHLEVQIlADQYGNNISLFgrdcsvqrrHQKIIEEAPVT-V 313
                  566899*******************9777766665..4433.566666666555554444443313333333222244444432222222333433.2 PP

                  HHHHHHHHHHHHHTTSTT--EEEEEEEE...ESS...SEEEEEEESS-- CS
  ATP-grasp_3 116 lkeevvelaeevvekleglaGyvGvDlv...lkd..eepyviEvNPRlt 159
                     ++++++e++  +l +l+Gy+    +   ++   ++ +++E NPRl+
   EPX74755.1 314 APPNTFREMERAAVRLGELVGYASAGTIeylYEPetDKFHFLELNPRLQ 362
                  34455555666666666777776555555434444579999******97 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 2
                  S--TTE..........EEEE---SEEEEEEE CS
  ATP-grasp_3  52 ekeeaeaaieeve...lvqefieGkplSvsl 79 
                  + ++ ++ ++ ++    +q + eG++lSv+ 
   EPX74755.1 845 KARARKTEFPAKQlelGLQTYCEGQKLSVTQ 875
                  4443333333333223489*********975 PP

>> ATP-grasp  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00012      0.22      14     159 ..     209     360 ..     203     363 .. 0.66

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00012
                 ECCHHHHHHHHHHH-SCEEEEESSS-CTTTTEEEECTCCGHHCHHHHC....GTTCEEEEE----SEEEEEEEEEETTC-.EEE--EEEEEEETTEEEE CS
   ATP-grasp  14 veskeeleeaaeelglpvvvKarrlgydGkGqsvvrseedleqaleal....keekvivEefvpfekElsvlvvrsaeGe.tafypvvetvqedgilrl 107
                 ++s+e+  ++ae++g+pv++K +  g  GkG   v s+++  +a +++     + +v v + +   + l v +  ++ G+ ++ +     vq++    +
  EPX74755.1 209 INSAEDGVAVAEKIGYPVMIK-ASEGGGGKGIRQVTSSQHFTHAYQQVlaelPGSPVFVMKLAGQARHLEVQILADQYGNnISLFGRDCSVQRRHQKII 306
                 66777777899**********.666778*****999999988877766555577788888877777777777777777763444444444444444444 PP

                 EEECEE-.SCHHHHHHHHHHHHHHHHHTSSEEEEEEEEEE.TTCTEEEEEEESS CS
   ATP-grasp 108 svapaev.sekaqkkaeeiakkiveeLggvGvfavElFvl.edgellvnElapR 159
                   ap +v + +  ++ e+ a ++ e +g++   ++E  +  e+++  + El pR
  EPX74755.1 307 EEAPVTVaPPNTFREMERAAVRLGELVGYASAGTIEYLYEpETDKFHFLELNPR 360
                 444444314456666667777777777777777777555424444666676666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2245 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       512  (0.0285571); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 1.14u 0.31s 00:00:01.45 Elapsed: 00:00:00.52
# Mc/sec: 12911.64
//
Query:       EPX74756.1  [L=184]
Description: DUF788 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.3e-46  157.7   1.1    2.6e-46  157.5   1.1    1.0  1  TMEM208_SND2  SRP-independent targeting protein 2/TMEM208


Domain annotation for each model (and alignments):
>> TMEM208_SND2  SRP-independent targeting protein 2/TMEM208
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.5   1.1   1.4e-50   2.6e-46       1     167 [.       1     178 [.       1     179 [. 0.93

  Alignments for each domain:
  == domain 1  score: 157.5 bits;  conditional E-value: 1.4e-50
  TMEM208_SND2   1 mAkksaKkiaeeNkatLknlrlislavnalylllrlllrsslrprslllylllslpalllyyvlekmgrpkydedgelvdsGeDLsegGlteymfDv 97 
                   mA++++Kk+a +Nk++L ++  + ++vn+l++llr+++rs l++ s lly++++  a +++y+l++ + pkyd++g+l+  G+DL + G+t+ym D+
    EPX74756.1   1 MANAAQKKLAVQNKRILMFMLVADVTVNLLFILLRFFVRSPLSKLSKLLYVFSAGSAGFVHYQLNRAAAPKYDSRGALLYVGQDLLQHGVTSYMIDY 97 
                   9************************************************************************************************ PP

  TMEM208_SND2  98 iyltwivqvlsilfgnkfWllylviPayalYklwglil....gpaffkgagsa.......eeaaeeeeaksKrqeKlekRa 167
                   +y++wi+ +ls l+++kf+ lyl++P++++Yk++ l+     + + f+++g++       +e a++++  sKrqeKl+k+a
    EPX74756.1  98 MYFSWIIILLSSLTSTKFFALYLLVPIFVGYKAFPLLRmgfqQLQKFRNQGTNdpasseqAEPATANQPLSKRQEKLRKKA 178
                   ***********************************98854444466656665588998877777888************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       791  (0.0441185); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1335.20
//
Query:       EPX74757.1  [L=612]
Description: gamma-glutamyltranspeptidase Ggt2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.2e-169  565.3   0.0   1.4e-169  565.1   0.0    1.0  1  G_glu_transpept  Gamma-glutamyltranspeptidase


Domain annotation for each model (and alignments):
>> G_glu_transpept  Gamma-glutamyltranspeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  565.1   0.0    8e-174  1.4e-169       2     511 ..      99     606 ..      98     607 .. 0.97

  Alignments for each domain:
  == domain 1  score: 565.1 bits;  conditional E-value: 8e-174
                      HHHHTT--HHHHHHHHHHHHHHHSTTT-STTSEEEEEEEETTSCEEEEEEE--BB-TT--TTTTTSCBCCHHHHSSGGG-BB--HHHHHHHHHH CS
  G_glu_transpept   2 evLrkGGnAvDAavAaalclgvvepqssGiGGGgfllvydaktkkvealdaretAPaaatkdmfdkegdsklsktgalavgVPGevagleeahk 95 
                      ++L  GGnAvDAavA++lc+g v+++ssGiGGGgf+l++  ++++  ++++re+AP++a+k+mf  +++++l+++gal++g+PGe+agl++a++
       EPX74757.1  99 DILSMGGNAVDAAVASTLCIGTVNFCSSGIGGGGFMLIQLPNGTSE-SINFREMAPGNASKHMF--DENPRLAQIGALSIGIPGELAGLYDAWN 189
                      89****************************************9988.8****************..9*************************** PP

                      HH-SS-HHHHHHHHHHHHHH-EE--HHHHHHHHHCHHH.HHTSHHHHHHHEETTSE--TTSEE--HHHHHHHHHHHHHTTHHHHSSHHHHHHHH CS
  G_glu_transpept  96 kyGklpwadllepaiklareGfpvsealaralaeaeer.lkkdpelaklFlpegevlkagellkqpalAktLerlaeeGaeaFYkGelAeklva 188
                      ++G+l+w++++ p++kla+eGf+v++a++  + ++  + l +d+++a++ +p g+ lkag+++++pa++ktLe +a+eG+++FYkG l++++v 
       EPX74757.1 190 RFGRLEWSKIVRPSAKLAKEGFTVTPAMEHSMLDETTKdLMNDSTWASVIAPYGTLLKAGDIMRRPAFSKTLEIIAKEGVDSFYKGALTDAMVG 283
                      ****************************98877666666******************************************************* PP

                      HHHHTT-S--HHHHHH---EEES-EEEEETTCEEEEE-TTCSHHHHHHHHHHHHCTTTGGGCTTTCHHHHHHHHHHHHHHHHHHHHH-SSTTTS CS
  G_glu_transpept 189 elqkagGiltaeDLanykvevreplsadyrggytvyepppssggivllqiLnilegfdlkslssnsaetlhllvEamklayadRsrylgDpdfv 282
                      ++q++gGi+t+eD++ny+v + + ++++y +++ v+++p +++g++l++ Lnil+gf+++s+s  + ++lhl++Eamk+  a R++  gDp+f+
       EPX74757.1 284 FIQEHGGIITKEDFENYSVMISDVIETTY-RDHNVLTCPLPTSGPALIEGLNILDGFPMDSSSLSFTKRLHLQIEAMKWLSAGRTQ-FGDPEFI 375
                      *****************************.99******************************************************.******* PP

                      SSGHCHHHHHT-HHHHHHHHTT.BTTB..SGGGCSCGGCSCG.TTEEEEEEEEETTS-EEEEEEEESSTTTTSEBETTTTEBE--GGGGSBS.T CS
  G_glu_transpept 283 knptelveellskeyakeraklIkdkaatpsseyykaaeaaeesggTthlsvvDregnaVSltstinllFGsgvvvpgtGilLnnemddfst.g 375
                      ++  +l+++++ske+a +++++I+ +++   +e+y+++++ + ++gTth+sv D+eg  VSltst+nllFGs+++ p tGi++n++mddfs+ g
       EPX74757.1 376 QENMALISKMMSKEFASQVRENISMTRTYS-WEHYNPSYDVPGNHGTTHISVTDNEGYSVSLTSTVNLLFGSQLMDPVTGIVFNDQMDDFSIpG 468
                      *****************************9.9************************************************************** PP

                      S..TTSCSTTSTTB--TT----B----EEEEE.TTEEEEEEEEESGGGHHHHHHHHHHHHHTT-S-HHHHHHS--EEESSSSTEEEESTTS.HH CS
  G_glu_transpept 376 venafgldpspanaiePgkRplssmaPtivlk.dgkpvlvlGaaGGsriisavlqvlvnvldlgldlqeavdaprihhqllpdkvevEegfsee 468
                       +naf+l+psp+n+ieP kRplss aPti+ +  g++ +vlGa+GGsri++avl+++v+ +d++ d++++v++ r hhql p+++ +E+gfs+ 
       EPX74757.1 469 SSNAFNLTPSPWNYIEPYKRPLSSAAPTILRNkRGNFNMVLGASGGSRIVTAVLDAIVKRVDMKYDIESMVASARSHHQLRPNVLVLENGFSKV 562
                      ********************************9************************************************************* PP

                      HHHHHHHTTSEEEESS.STCCCEEEEEEEETTTEEEEEE-TTTT CS
  G_glu_transpept 469 vveeLearGhkvkeve.dsssvvaavavakekgvleaasDprkd 511
                      +++ ++++ hkv + + +++ ++a++av+k+kg ++++sDprk 
       EPX74757.1 563 IASRIKKYLHKVVRLKsRTTPLSAVQAVMKHKGMIYGMSDPRKY 606
                      **********98765515666777777888************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (612 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       509  (0.0283898); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.29s 00:00:00.90 Elapsed: 00:00:00.46
# Mc/sec: 3975.06
//
Query:       EPX74758.1  [L=231]
Description: N-acetyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.3e-06   27.1   0.0      5e-06   26.5   0.0    1.3  1  Acetyltransf_10  Acetyltransferase (GNAT) domain
    1.2e-05   25.6   0.0    2.4e-05   24.6   0.0    1.5  1  Acetyltransf_7   Acetyltransferase (GNAT) domain
    6.5e-05   23.0   0.2    0.00023   21.2   0.2    1.9  2  Acetyltransf_9   Acetyltransferase (GNAT) domain
     0.0088   16.3   0.0      0.015   15.5   0.0    1.4  1  Acetyltransf_1   Acetyltransferase (GNAT) family


Domain annotation for each model (and alignments):
>> Acetyltransf_10  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.0   1.1e-09     5e-06      52     110 ..     148     205 ..     111     215 .. 0.83

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 1.1e-09
  Acetyltransf_10  52 s.hisllfVdpeyrgqGigkaLleaveeeaekdgikleltvnaspyavpfYeklGFkavg 110
                         ++l+ V+p+ +++G+gka+l+ v + a+ +++     + as+   ++Ye+lG+++  
       EPX74758.1 148 FiMVHLVSVNPDSQKKGVGKAMLNIVHRDADSHQL--PCFLFASTVGYGMYEHLGYRTAV 205
                      3578999***********************66643..8******************9874 PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.0   5.4e-09   2.4e-05      28      75 ..     152     202 ..     117     203 .. 0.68

  Alignments for each domain:
  == domain 1  score: 24.6 bits;  conditional E-value: 5.4e-09
                     EEEEE-GGGTTSSHHHHHHHHTT.....SE..EEEEEEEETHHHHHHHHHHTTEE CS
  Acetyltransf_7  28 trlaVdpeyrgkGiGraLleaae.....kg..iileqlelnaekaikfYeklGFe 75 
                     + + V+p+ ++kG+G+a+l++++     ++  + l+ +  ++    ++Ye+lG++
      EPX74758.1 152 HLVSVNPDSQKKGVGKAMLNIVHrdadsHQlpCFLF-A--ST-VGYGMYEHLGYR 202
                     2288****************7332333322223222.2..22.4578*******8 PP

>> Acetyltransf_9  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.46   2.1e+03       2      27 ..      14      39 ..      13      49 .. 0.82
   2 !   21.2   0.2   5.2e-08   0.00023      30     127 ..      99     203 ..      83     204 .. 0.71

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.46
                    EEEE-GGGHHHHHHHHHHHTT----H CS
  Acetyltransf_9  2 irelteedldevlellkyaFqdeesp 27
                    +r+l+ +dl  v +l  +aF+d+++ 
      EPX74758.1 14 FRNLKYSDLGPVTALTLRAFKDSDTW 39
                    68889999999999999999999875 PP

  == domain 2  score: 21.2 bits;  conditional E-value: 5.2e-08
                     HHHHHHHHHHTTSEEEEEEETTEE..EEEEEEEEEEEEETTEEEEE.....EEEEEEEE-CCGTTS-HHHHHHHHHHHHHHHTT--EEEE--..S CS
  Acetyltransf_9  30 eireyfrklleesrvlgaedngel..vgqlallplelnvpGktlka.....agvtgVavapehrgrgvlskLlaraleemreegqplsllfP..s 115
                     ++ ++++ l+e+  ++ ++d g l   +q++ +++e +++ + l +      +v  V+v+p+ +++gv +++l+ +++++++++    +lf+   
      EPX74758.1  99 RFIQWLHGLYER-FIYWWYDAGALkrRAQYNEVQYETALYKTGLLTqpngfIMVHLVSVNPDSQKKGVGKAMLNIVHRDADSHQL-PCFLFAstV 191
                     566676666666.6666777665522577777777777766544432222257889*************************8555.578888344 PP

                     SHHHHHTTT-EE CS
  Acetyltransf_9 116 sipiYrrfGyei 127
                      +++Y+++Gy++
      EPX74758.1 192 GYGMYEHLGYRT 203
                     48********97 PP

>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   3.3e-06     0.015      56     117 .]     144     201 ..      85     201 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 3.3e-06
                     TSTTEEEEEEEEESGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTEHHHHHHHHHTTE CS
  Acetyltransf_1  56 ekggvayieslaVspeyrgkGlGsaLlealeerareegikkivlaveedndaairlYeklGF 117
                     + +g + ++ + V+p+ ++kG+G+a+l+ + + a ++++   +l      +   ++Ye lG+
      EPX74758.1 144 QPNGFIMVHLVSVNPDSQKKGVGKAMLNIVHRDADSHQLPC-FL---FASTVGYGMYEHLGY 201
                     3457889999******************9999999998877.55...335556899988887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       281  (0.0156729); expected 358.6 (0.02)
Passed bias filter:                      246  (0.0137208); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1649.17
//
Query:       EPX74759.1  [L=554]
Description: DUF1752 family protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-12   45.8   5.1    9.3e-12   44.6   5.1    1.7  1  DUF1752   Fungal protein of unknown function (DUF1752)
    5.6e-11   42.5  48.2    7.2e-09   35.5  10.2    2.2  2  DUF3295   Protein of unknown function (DUF3295)


Domain annotation for each model (and alignments):
>> DUF1752  Fungal protein of unknown function (DUF1752)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.6   5.1     1e-15   9.3e-12       1      28 []      33      60 ..      33      60 .. 0.97

  Alignments for each domain:
  == domain 1  score: 44.6 bits;  conditional E-value: 1e-15
     DUF1752  1 lWkyytkkkkdlpngeRLENlSWRlWnk 28
                +W ++tk+  +l+ng+RLENlSWRlW++
  EPX74759.1 33 MWNVFTKCAENLENGRRLENLSWRLWYR 60
                7*************************96 PP

>> DUF3295  Protein of unknown function (DUF3295)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8  34.9   9.9e-05      0.89       2     242 ..      77     369 ..      76     397 .. 0.57
   2 !   35.5  10.2   8.1e-13   7.2e-09     302     450 ..     383     526 ..     367     532 .. 0.68

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 9.9e-05
     DUF3295   2 edvPeLSgSvdSaaseeave..................ieseskspve......iarprivredsla.srsrgkerhitsldLekmVvsIkekkelepl 75 
                 +++P+LS+S  S+as  +++                  ++++s s  +      + r  i+ + sl     r+ +r ++s+ + ++++s    +  +pl
  EPX74759.1  77 ASIPDLSSSCGSIASSADSDedvcafsptsksdtirlnSTTNSGS--QesfvheNPRGLIRSTSSLRpRARRSSSRLLSSDTFSQLITSFSPLE--KPL 171
                 579******999988777777788999988888877652222222..134665456666999999996668999***************99877..677 PP

     DUF3295  76 sl..........psik...................leseeeevdvtprassp..ssseeseeqpeaeeeaeassaaekesstsscstsaaeeaesseae 143
                 +           ps k                    ++++ ++d   ++ +p  + +++++ ++++ +++ +ss+a+++ +++s+s+s a+ a++++ae
  EPX74759.1 172 EKsadlhqqpsnPSFKyqnrpalavtvsephyassCSVSDYRKDSHADTMTPpgPAQSNEKMSKKELSKVGSSSHAKPQMANKSVSSSVAAAARAKDAE 270
                 766556766544333355444444544444443432222222333333333333333333333333444444555555555556666555555555544 PP

     DUF3295 144 avgsdtsvssteksssvvrGFspsqisssyrsstklsseptpskkssesapkakpvqkkkqamFtLGgSsgdddeS...sleermaakak..sseerss 237
                  ++  + + + +ks+sv++GF ps   ++   stk++s+ + s++ s s  k++  ++k ++ F L g   d++ S   s     +++ +  ++  ++ 
  EPX74759.1 271 REKIAKLTVTPGKSTSVIHGFHPSSSKTTPSPSTKTKSAVQDSNTGSGS-LKQAFNTNKSHPFFYLRGAYSDKNASqssS---MISTTDEetNP-PKNT 364
                 444445555555***********98666655555554444444444443.6666666899******88876877774331...22222111112.2222 PP

     DUF3295 238 lsdal 242
                 +  +l
  EPX74759.1 365 VIPEL 369
                 22233 PP

  == domain 2  score: 35.5 bits;  conditional E-value: 8.1e-13
     DUF3295 302 Dsveesgrssvdek....elFqRVdSrpnLtSrrSLlTlmlhqpdrakalgnaasrStpalqrsrtsspngpslaaspedsdeaelmm.pinevprskP 395
                 Ds++e+   svde+      F +   +p    r S l+l+l ++dr+   +n+ srS  a      +sp+ p + as  ++ ea+++  + +  + s  
  EPX74759.1 383 DSDDEDAWVSVDEEantpPCFYKRPPTPFSSYRNSALSLLLSKEDRTHGGHNNDSRSRLAA-----ASPTLP-INASKANNHEANMETlNSSLLSGS-- 473
                 5555555555555532223455556677777799************998888888887774.....456677.455555555555544233333334.. PP

     DUF3295 396 iivtttntakqqvAlSPrTtRRnMLatELTeSLRrhLLWErqqksstanAvlkRr 450
                 i  ++ +    q+++   +++ + L++E+ eSLRr+LLWEr+qk+s  +Avl+R 
  EPX74759.1 474 IPLSSEPR-VYQISHN-NANKTKILNSEISESLRRDLLWERRQKASLSSAVLRRH 526
                 43444443.2455554.578889*****************************885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (554 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       763  (0.0425568); expected 358.6 (0.02)
Passed bias filter:                      246  (0.0137208); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.23s 00:00:00.80 Elapsed: 00:00:00.40
# Mc/sec: 4119.33
//
Query:       EPX74760.1  [L=546]
Description: chaperonin-containing T-complex epsilon subunit Cct5 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     9e-161  535.8   5.3     1e-160  535.6   5.3    1.0  1  Cpn60_TCP1  TCP-1/cpn60 chaperonin family


Domain annotation for each model (and alignments):
>> Cpn60_TCP1  TCP-1/cpn60 chaperonin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  535.6   5.3  5.7e-165    1e-160       1     490 [.      46     539 ..      46     540 .. 0.98

  Alignments for each domain:
  == domain 1  score: 535.6 bits;  conditional E-value: 5.7e-165
                 HHHHHHCCSSTTXXEEEEEETTSEEEEEXSHHHHHHCSXXXSHHHHHHHHHHHHCCCCCTTCHHHHHHHHHHHHHHHHHHHHCTXXHHHHHHHHHHHHH CS
  Cpn60_TCP1   1 ladivkttlGPkGmdKmlvnkggkvvvTnDGatilkeleiehPaakllveaaesqdeevGDGTttvviLageLleeaekliaagvhpttiiegyekale 99 
                 +a+iv+t+lGP+G+dK+l+++ g+++vTnDGatil+++e+eh +akllv++++sqd+e+GDGTt vv+Lag+Lle+ae li++g+hp++i +g+eka++
  EPX74760.1  46 VANIVRTSLGPRGLDKILISPDGDITVTNDGATILEQMEVEHQIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEGLIDKGIHPIRIADGFEKACQ 144
                 689************************************************************************************************ PP

                 HHHHHHHHHXEEBXSCSTT.HHHHHHHHHHCTTSSXXSTHHHHHHHHHHHH.HCHCCCSEECSCCCEECCCCEECECTTSEEESEEEESS--SSTTSSC CS
  Cpn60_TCP1 100 kaleaLkeiaveisseekdreeLlkvartslsskltskeaeelsklvvdAv.klieenekeldlgrikvvkieggsledselveGlvldkgvlspdmpk 197
                 + +++L++i+  ++ ++ d+++L ++a+tsl+sk++sk  ++++k++v+Av ++ + ++k++d++ ikv  + g s++d++lv+G+v+dk++++p+mp+
  EPX74760.1 145 HSVKHLDSISDVVNFDKLDTTNLFRAAKTSLGSKVVSKAHDHFAKIAVEAVlSVADFERKDVDFELIKVDGKVGASVDDTTLVKGVVVDKDMSHPQMPH 243
                 ***************************************************55555555**************************************** PP

                 EEECEEEEEESS-BS--HHCCHHHCCCCSCCHHHHHHHHHHHHHHHHHHHHHHTTECEEEESS-B-HHHHHHHHHCT-EEE-S--HHHHHHHHHHHT-- CS
  Cpn60_TCP1 198 klenakvllldvsLeiektetkttvvlsdaeeleklekaeekqleellekiiksgvnvvvcqkgiddlalhflakngilalrrvkkkdlerlakatGat 296
                 ++e+ak+++l++++e++k++tk+++++++++e+e+l+k e++++e +++ ++++g+n+v+cq+g+dd+a+h+l +n++ a+r+v   ++e +a+at+++
  EPX74760.1 244 HIEDAKIAILTCPFEPPKPKTKHKLDITSVNEFEALQKYEKEKFEGMIKHVKDAGANLVICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATNGR 342
                 *************************************************************************************************** PP

                 EBSCGGGGGCGC-EEEEEEEECCETT..CCEEEEECESSSSXEEEEEEESTCCCHHHHHHHHHHHHHHHHHHHHHHEEEETTTCHHHHHHHHHHCCCCT CS
  Cpn60_TCP1 297 avssledltpeelGtakkveeekigs..ekttiieevksgkiatillrgatdtvldeieraiedAlnvvknaiedekvvpGGGatelelakklkeyaks 393
                 +v ++edl++e+lGta+ v+e ++g+  +k+++ie++++ +++ti +rg++++++de++ra++dAl+vv+n+i+d++vv+GGGa+e++++ +++++a++
  EPX74760.1 343 IVPRFEDLSNEKLGTAGLVREVSFGTtrDKILVIEKCANTRAVTIFVRGSNKMIVDEAKRALHDALCVVRNLIRDNRVVYGGGAAEVSCSLAVNQEAEK 441
                 ************************987799********************************************************************* PP

                 SXCCHHHHHHHHHHHHTHHHHHHHHHCTSXHHHHHHHHHHHH.HTTXTTEEEETTTTCEEECCCCTXEEEHHHHHHHHHHHHHHHHHHHCEEEEEXXX CS
  Cpn60_TCP1 394 vsgeeqlaieafakALevipktLaeNaGldpievlaklraah.nkgekelgidvesgeiidlveagvvDplkvkrqalksAteaastiLrideiikak 490
                 ++g +q++++afa+AL ++p +LaeN+Gl++ie l+ ++a+h ++++ +lgid+      +++e+ v+Dpl  k+q l +At++ +++L++++ii+a+
  EPX74760.1 442 IPGIDQYSMRAFADALDTVPLALAENSGLSSIEALTAVKARHvKENNSHLGIDCLHTGHNNMKEQFVIDPLIGKKQQLLLATQLCRMVLKVNDIIVAG 539
                 ******************************************755557*******999*************************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (546 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       412  (0.0229795); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 3787.06
//
Query:       EPX74761.1  [L=452]
Description: 19S proteasome regulatory subunit Rpn502 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-20   73.6   1.4    5.5e-20   71.8   0.0    2.6  3  PCI              PCI domain
    3.6e-12   46.1   2.5    1.2e-11   44.5   2.5    1.9  1  RPN5_C           26S proteasome regulatory subunit RPN5 C-ter
  ------ inclusion threshold ------
        1.5    8.9   4.3        2.6    8.1   0.9    2.6  2  Baculo_PEP_C     Baculovirus polyhedron envelope protein, PEP


Domain annotation for each model (and alignments):
>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       1.1   6.7e+03      59      87 ..      33      60 ..      22      75 .. 0.64
   2 ?   -1.5   0.1      0.62   3.7e+03      38      66 ..     111     142 ..      67     152 .. 0.51
   3 !   71.8   0.0   9.1e-24   5.5e-20       3     105 .]     299     408 ..     297     408 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 1.1
                SEEEHHHHHHHHTSSHHHHHHHHHHHHHT CS
         PCI 59 ssislerlaklldlsvdevEkilvklIrd 87
                s++++++  ++l +++++v +  +++I +
  EPX74761.1 33 STVDIDSSLEKLLIFEKQVRQ-ASDAITN 60
                566676666666666666544.3445544 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.62
                 HHHHHHHHHHH.HHHHHHHH..CESEEEHHHH CS
         PCI  38 llesLekkvre.rllrqvsk..iyssislerl 66 
                  +e+L+kk+ + ++lr+++   iy  ++ +rl
  EPX74761.1 111 AIEDLKKKIDLiETLRTITDgkIYVEVERARL 142
                 45555555532134433333445555555555 PP

  == domain 3  score: 71.8 bits;  conditional E-value: 9.1e-24
                 HHHHHHHHHHTSHHHHHHHHHHH.....HHHHHHHTTHHH.......HHHHHHHHHHHHHHHHHHHCESEEEHHHHHHHHTSSHHHHHHHHHHHHHTTS CS
         PCI   3 ysdllkalrsgnlsgfseelkdl.....eeelladdglaq.......llesLekkvrerllrqvskiyssislerlaklldlsvdevEkilvklIrdge 89 
                 +++l+k+++ ++l++++++ + +     + +++a     +        +++L+k+v+e+++r+v+k+ys+i+++rl  lld++ +e+E +l++lI + +
  EPX74761.1 299 LQQLVKCFTVNELMRWPKISEIYgsvlrSTPVFA-----EndekgekRWSELRKRVIEHNMRTVAKYYSRIQCDRLGVLLDMNPEETELFLSDLITKRQ 392
                 579********************66666444443.....34444577**************************************************** PP

                 SSEEEETTTTEEEECS CS
         PCI  90 irakidqesgivvfkk 105
                 ++a+id++++++ fkk
  EPX74761.1 393 FYARIDRPAQVITFKK 408
                 **************97 PP

>> RPN5_C  26S proteasome regulatory subunit RPN5 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.5   2.5     2e-15   1.2e-11       4      33 .]     416     445 ..     414     445 .. 0.98

  Alignments for each domain:
  == domain 1  score: 44.5 bits;  conditional E-value: 2e-15
      RPN5_C   4 LNeWssninkLLelvekttHLInKEeMvhk 33 
                 LNeW  ni+ LLe++ekt++LI KEeM+h+
  EPX74761.1 416 LNEWGTNISALLEKLEKTRQLIIKEEMMHS 445
                 9****************************7 PP

>> Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.9   0.00043       2.6      48     118 ..      35     108 ..      14     130 .. 0.63
   2 ?    0.4   0.1       0.1   6.1e+02      42      63 ..     411     432 ..     402     451 .. 0.69

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00043
  Baculo_PEP_C  48 nalsedlksllaeldtrldtlltnLtda..lnalqdtl..rneLtnlnsiltnLlssvtNinstLnnllqalnnl 118
                    +++++l++ll  +++++ ++++++t++  l  ++d l    + ++ln +l nL  + + +++++++l+q + n+
    EPX74761.1  35 VDIDSSLEKLLI-FEKQVRQASDAITNTrvLCFIADLLyhAHDFQGLNEQLVNLSKKHGQLKQAMTSLVQHVMNY 108
                   356666666555.66677777777765422444445552245788899999999999999999999999988887 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.1
  Baculo_PEP_C  42 aietqLnalsedlksllaeldt 63 
                   ++++qLn+  +++++ll++l++
    EPX74761.1 411 NVHEQLNEWGTNISALLEKLEK 432
                   5677777777777777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (452 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       996  (0.0555525); expected 358.6 (0.02)
Passed bias filter:                      494  (0.0275531); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.22s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 3110.24
//
Query:       EPX74762.1  [L=738]
Description: cytochrome c oxidase assembly protein COX11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.7e-58  194.8   0.1    1.3e-57  194.1   0.1    1.4  1  CtaG_Cox11       Cytochrome c oxidase assembly protein CtaG/C
    1.2e-41  142.8   0.0    1.9e-41  142.2   0.0    1.3  1  Rsm22            Mitochondrial small ribosomal subunit Rsm22
     0.0054   16.6   0.0      0.012   15.4   0.0    1.6  1  Methyltransf_23  Methyltransferase domain


Domain annotation for each model (and alignments):
>> CtaG_Cox11  Cytochrome c oxidase assembly protein CtaG/Cox11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  194.1   0.1   2.2e-61   1.3e-57       1     151 []     573     724 ..     573     724 .. 0.94

  Alignments for each domain:
  == domain 1  score: 194.1 bits;  conditional E-value: 2.2e-61
  CtaG_Cox11   1 avPlyrvfCeatGlggktekaaae..ksaavkvdeertevtveFdadvseklpwefkpeqrslevkpGetalafytaknksdkpiigqavysvaPeeaa 97 
                 +vPlyr+fC++tG+gg++++++++   +++v   +++ +v+v+F++dv+ +l w++ p+q+++ v+pGetalafyta+n sd++i+g+a+y+++P +aa
  EPX74762.1 573 SVPLYRLFCSKTGYGGTVNTDQERmnVDRMVPRRDSK-RVRVTFNSDVAGNLRWKLYPQQKEIWVQPGETALAFYTAENYSDEDIVGVATYNIVPGQAA 670
                 59*****************988775433355555566.6************************************************************ PP

  CtaG_Cox11  98 kyfnKieCFCFeeqkLkpgeevdlpvlFfidpelaedpelkkvkeitLsYtffe 151
                  yf+K+ CFCFeeqkL++ge+vdlpv+Ff+dpe+ +dp++k v++i LsYtffe
  EPX74762.1 671 IYFSKVACFCFEEQKLDAGEKVDLPVFFFLDPEFVDDPNMKYVDDILLSYTFFE 724
                 *****************************************************6 PP

>> Rsm22  Mitochondrial small ribosomal subunit Rsm22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.2   0.0   3.2e-45   1.9e-41       3     275 .]     137     458 ..     135     458 .. 0.87

  Alignments for each domain:
  == domain 1  score: 142.2 bits;  conditional E-value: 3.2e-45
       Rsm22   3 esiaYalarlpatyavlrrvLdelaervpd..flPkslldvgegpgtalwaaselweeleevlvidaseelleiskelaadapelkeaalrrsvireal 99 
                 + +aY+  ++p +ya l+ + +el++  +       ++ld g+gp  + +  +  ++ + +  v++  + l+ei k+l +++ +       +  +  +l
  EPX74762.1 137 QILAYLKETMPYQYASLYHIFHELKSLLKGkpSDQLKVLDCGKGPNLGAILCQSFFPTTIPFSVVEENRFLREIIKQLNQNISSSLDSGNLNPELFGRL 235
                 678******************999987654113446799******************************************999888888888888999 PP

       Rsm22 100 eleea...dLviisyvLleled.esreklvknlWakask..ilvivEeGtpaGfrrvleaReal.........kaagfhivAPCPHeaaCPlvate... 180
                  l ++   dLvi s  Lle    e+    +++lW  ++k  i+++ E+G ++Gf+ ++ aR +l            +++i+APCPHe  CP+  +    
  EPX74762.1 236 PLSQKgnyDLVIASNRLLECDSdEELFGYLRALWSLLNKggIVILTEQGSKHGFHAIKRARSFLinrgkdkenDRLDARILAPCPHEDRCPINIDSgvr 334
                 99999999************9879999***********99899999******************99887754444479***************998889 PP

       Rsm22 181 .dwChFsqrvaRlslhr.lak.sasvpvedekfsy..vakerqprasa.........................aaRvvrptkvrskkvlidlCsedetl 249
                  + C+F q +   s  r ++  s++ +   +kfsy  ++k+   +  +                         ++R++r + +r ++v++d+C +d +l
  EPX74762.1 335 aNVCNFKQHFFFPSFSRlYVPrSEQRSQSHSKFSYvvLQKGVARE--SntykpvqneqellkpgfedndghinWPRIIRSPLKRHGHVIVDVCDHDAQL 431
                 99*******996555551555688889999*****6544443333..2347899********************************************* PP

       Rsm22 250 qrlvvtKrkG.eaykaArkaeWGDrlp 275
                 +r+++ K++G   y+ Ark++ GDr+p
  EPX74762.1 432 RRHIIPKSQGkLYYQIARKSNLGDRFP 458
                 **********446799*********96 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   2.1e-06     0.012      25     140 ..     173     308 ..     143     318 .. 0.67

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 2.1e-06
  Methyltransf_23  25 rvLdiGcGtGillevlrengf...svtgvDlspeaveiaekakkaqkdqfdeqeaae.........pqgkfdlIvlrevlehvpd...ppellr 103
                      +vLd G G    + +++ ++     + +v+ ++ + ei+++  ++++++ d+ +  +         ++g +dl+++++ l   ++   +  +lr
       EPX74762.1 173 KVLDCGKGPNLGAILCQSFFPttiPFSVVEENRFLREIIKQLNQNISSSLDSGNLNPelfgrlplsQKGNYDLVIASNRLLECDSdeeLFGYLR 266
                      677754444322222233332323555777777777777666666666664443333666666666888****999888777774244669*** PP

  Methyltransf_23 104 qiatllkpgGylllseplasl.....kedrllldwlylvpag 140
                       +++ll+ gG ++l+e+++++     k++r++l ++  ++++
       EPX74762.1 267 ALWSLLNKGGIVILTEQGSKHgfhaiKRARSFLINRGKDKEN 308
                      *******************99998777777777777666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (738 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       635  (0.0354175); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.28s 00:00:00.93 Elapsed: 00:00:00.45
# Mc/sec: 4942.12
//
Query:       EPX74763.1  [L=234]
Description: SMN family protein yip11 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.6e-14   52.0   2.3    1.7e-12   47.5   2.3    2.0  1  SIP1      Survival motor neuron (SMN) interacting protein 1 (


Domain annotation for each model (and alignments):
>> SIP1  Survival motor neuron (SMN) interacting protein 1 (SIP1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.5   2.3   9.5e-17   1.7e-12       6     207 ..      36     222 ..      30     227 .. 0.74

  Alignments for each domain:
  == domain 1  score: 47.5 bits;  conditional E-value: 9.5e-17
        SIP1   6 epddesgpPedgeeYLrrVryEakrcpdVvvakidpskla.kkqtvympsipeiakcp.esllPtkeWeqeqladFselRqklsalreelqkkekkqki 102
                 + + e + P dg+ YL  Vr+Ea ++ + ++a+++p+k   k+++   ++ ++ +  p + l+   +  ++ +++ s    +l             ++ 
  EPX74763.1  36 DTLEEIQIPLDGLDYLAAVRREAMSLKSFKTANVQPEKPDtKTRNPLYTEATQPVRFPePLLKNLYDLVEQNNKKLSTYPPHLL-----------LDNS 123
                 56667789*************************999877734444444444433333312222333444444444444444433...........3355 PP

        SIP1 103 klpkikdeekwkefclgegnePllsillsldqvtveslleyliewleeeeelskelaqWlyallavlekPLdadtcsalRsllrkcaklRaekseedee 201
                 +lp++   ++w++ ++++   P++++++s d  t+  ++e+++ wle +++l + +aqWl+  +  l   L+ + +s+lRs lr++++   + s+ + +
  EPX74763.1 124 TLPSTL--QQWRQTIANK--IPSWDFVASTDLATILDIFENCAYWLE-NDTL-DVQAQWLFCFCCKLPDILNGEDISTLRSALRSLRSTHTTFSSIQTS 216
                 666665..56******99..9**************************.5555.569******************************9999987666667 PP

        SIP1 202 lamlnl 207
                 +++ln 
  EPX74763.1 217 ASTLNS 222
                 776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (234 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       468  (0.026103); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 1600.40
//
Query:       EPX74764.1  [L=348]
Description: ubiquitin-protein ligase E3 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.1e-17   61.6  10.0    4.3e-16   59.2  10.0    1.9  1  Pex2_Pex12    Pex2 / Pex12 amino terminal region
      7e-07   29.3   4.4    1.8e-06   28.0   4.4    1.7  1  zf-C3HC4_4    zinc finger of C3HC4-type, RING
    1.6e-06   27.8   1.7    3.2e-06   26.9   1.7    1.5  1  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
    8.4e-06   25.6   1.4    1.8e-05   24.5   1.4    1.5  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
    3.5e-05   23.6   1.0    6.8e-05   22.6   1.0    1.5  1  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
      0.001   19.4   2.1     0.0021   18.3   2.1    1.5  1  zf-RING_2     Ring finger domain
     0.0065   16.5   4.2      0.018   15.1   4.2    1.8  1  zf-RING_UBOX  RING-type zinc-finger
  ------ inclusion threshold ------
       0.13   12.1   0.9       0.24   11.3   0.9    1.4  1  Prok-RING_4   Prokaryotic RING finger family 4
       0.88    9.9   3.4        2.9    8.3   3.4    1.8  1  zf-rbx1       RING-H2 zinc finger domain
        1.1    9.2   4.1         13    5.7   0.3    3.1  3  zf-FPG_IleRS  Zinc finger found in FPG and IleRS


Domain annotation for each model (and alignments):
>> Pex2_Pex12  Pex2 / Pex12 amino terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.2  10.0   2.4e-19   4.3e-16       2     224 ..      13     260 ..      12     261 .. 0.78

  Alignments for each domain:
  == domain 1  score: 59.2 bits;  conditional E-value: 2.4e-19
  Pex2_Pex12   2 eelesllkpalryilrllagqrfp.....ilnyfdEikllldlllelltlksgngTfgeefygLkrv............ssselkkrrllskrqrllsl 83 
                 +e+++l+ p+++yi++++ ++r+p     ++n+ d ++++l++++e+++lk++n T  e+ + Lkrv             ++e+   ++l++++ l+ l
  EPX74764.1  13 QEIDGLVLPSIKYIFAYF-THRYPrqllgAYNSLDDFYFFLKVIIEYRSLKNWNCTSVERRFQLKRVkyiknkeclvdlFPEEVNSAIRLRQTDILAKL 110
                 899*************75.***********************************************************9999***************** PP

  Pex2_Pex12  84 lllvlipYlkekldelysarerysaealsd...........earnsreslk...................krlkrlllklypfiealyellnlvlqllY 152
                 +++ ++p+l +k+ ++       +++++s+                                        ++lk+ll+ l  +++ ++++++ + +++Y
  EPX74764.1 111 FFTYCLPFLISKVKTWS------NNTRISEfrvnaptehstT--------QteshgqhssffrtfrlkilSKLKKLLTILKFTFQLGSNFCKKIQWVYY 195
                 *****************......4444444554334422222........2334456666666666666555555555555555556666666677788 PP

  Pex2_Pex12 153 L.....sgkyysllkrllgiryvrlnpadq.rrnarrpsyeylnrqllwnalkellgllllllllsvfllkllewwys 224
                 L       ++ +++++ll+ r+v+ +   +  +++  + y              l  ll    ++++ l ++l+ww++
  EPX74764.1 196 LlfalgILPFSNPIDHLLKQRLVYDTSIPNlTSEKAHNPYT-------------LPSLLDNSMNIFLSLVQVLDWWQT 260
                 88775545779999999999999998888877777888888.............555555566666677788888875 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   4.4   9.8e-10   1.8e-06       1      40 [.     294     330 ..     294     331 .. 0.93

  Alignments for each domain:
  == domain 1  score: 28.0 bits;  conditional E-value: 9.8e-10
  zf-C3HC4_4   1 CPiCldYLekPvsleCGhsfClsCisslqkepdgeqllCp 40 
                 C+iC  Y+++P+ l  G++fC  Ci+s+ k++    + Cp
  EPX74764.1 294 CRICGHYIKNPAVLTTGFVFCYPCIQSWLKDN---PYICP 330
                 ****************************9998...47787 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   1.7   1.8e-09   3.2e-06       2      39 ..     294     331 ..     293     332 .. 0.93

  Alignments for each domain:
  == domain 1  score: 26.9 bits;  conditional E-value: 1.8e-09
  zf-C3HC4_2   2 CpiCldmlkdpsvvtpCgHvfCqkCilrsLeekn.eCPl 39 
                 C iC   +k+p  v   g vfC+ Ci+ +L+++   CP+
  EPX74764.1 294 CRICGHYIKNP-AVLTTGFVFCYPCIQSWLKDNPyICPV 331
                 ***********.66677*********************7 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   1.4   9.8e-09   1.8e-05       1      39 [.     294     330 ..     294     331 .. 0.96

  Alignments for each domain:
  == domain 1  score: 24.5 bits;  conditional E-value: 9.8e-09
                 -TTT-S--SS-E.E-TTS--B-CHHHHHHHHCTSSB--T CS
    zf-C3HC4   1 CpiCleeakepnelleCkHsfCskCirkilksrkkvkCP 39 
                 C iC +++k+p  +l+ +  fC++Ci+++lk ++ + CP
  EPX74764.1 294 CRICGHYIKNPA-VLTTGFVFCYPCIQSWLK-DNPYICP 330
                 ************.******************.99998*9 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   1.0   3.8e-08   6.8e-05       2      42 ..     291     331 ..     290     335 .. 0.94

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 3.8e-08
                 GSB-TTTSSSBS-EEETTEEEEEE-HHHHHHHHH.TT-B-TT CS
  zf-C3HC4_3   2 deeCviClerprnvvllpCgHlvlCeeCaekllk.rkkkCpi 42 
                 +++C iC +  +n ++l +g + +C+ C +++lk +   Cp+
  EPX74764.1 291 KNTCRICGHYIKNPAVLTTGFV-FCYPCIQSWLKdNPYICPV 331
                 689*******************.*********9989999997 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   2.1   1.2e-06    0.0021       1      42 [.     292     331 ..     292     332 .. 0.86

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 1.2e-06
   zf-RING_2   1 deCpICleelssadsvlllpCgHvfhreClerwlrssst.CPl 42 
                 ++C IC   + ++  vl++  g vf++ C++ wl+ ++  CP+
  EPX74764.1 292 NTCRICG-HYIKNPAVLTT--GFVFCYPCIQSWLKDNPYiCPV 331
                 58****5.56677888888..899************999***6 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   4.2   9.9e-06     0.018       1      39 []     294     330 ..     294     330 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 9.9e-06
  zf-RING_UBOX   1 CpIClelftdPlvlpCGHtFCreClwelskslegafkCP 39 
                   C IC    ++P vl+ G +FC +C+  +s  +++ + CP
    EPX74764.1 294 CRICGHYIKNPAVLTTGFVFCYPCI--QSWLKDNPYICP 330
                   99*********5557**********..466667777777 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.9   0.00014      0.24       1      37 [.     294     333 ..     294     342 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00014
  Prok-RING_4   1 CvlCgeqekkailepCgHlvCkeCfdsk.dls..sCPlCq 37 
                  C +Cg+  k++++   g ++C  C +s+ + +   CP+ +
   EPX74764.1 294 CRICGHYIKNPAVLTTGFVFCYPCIQSWlKDNpyICPVTK 333
                  99**************************744456999855 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   3.4    0.0016       2.9      31      53 ..     308     331 ..     287     333 .. 0.72

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0016
     zf-rbx1  31 eCgHaFHlhCiskWlktrkv.CPl 53 
                 + g +F   Ci++Wlk +   CP+
  EPX74764.1 308 TTGFVFCYPCIQSWLKDNPYiCPV 331
                 56778999*********8766*97 PP

>> zf-FPG_IleRS  Zinc finger found in FPG and IleRS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.1     0.061   1.1e+02      10      23 ..     145     158 ..     144     158 .. 0.90
   2 ?    5.7   0.3    0.0073        13       4      12 ..     294     302 ..     292     314 .. 0.82
   3 ?   -0.3   0.0      0.58     1e+03      20      25 ..     325     330 ..     323     331 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.061
                   BBEEEECTTEEEEE CS
  zf-FPG_IleRS  10 yiervgqagrstyf 23 
                   ++++++++++s++f
    EPX74764.1 145 TTQTESHGQHSSFF 158
                   5799********98 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0073
                   -TTT--BBE CS
  zf-FPG_IleRS   4 CpRCwryie 12 
                   C+ C++yi+
    EPX74764.1 294 CRICGHYIK 302
                   ********8 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.58
                   EEEE-T CS
  zf-FPG_IleRS  20 styfCp 25 
                   ++y+Cp
    EPX74764.1 325 NPYICP 330
                   89***9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (348 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       476  (0.0265492); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 2388.92
//
Query:       EPX74765.1  [L=438]
Description: COP9/signalosome complex subunit Csn2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.6e-18   64.8   2.6    8.6e-18   64.8   2.6    2.9  3  PCI       PCI domain
  ------ inclusion threshold ------
      0.022   14.8   0.0         18    5.7   0.0    3.7  3  TPR_7     Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   1.3      0.32   2.8e+03      56      61 ..      90      95 ..      46     178 .. 0.61
   2 ?   -0.8   0.8      0.24   2.2e+03      12      51 ..     163     200 ..     152     231 .. 0.51
   3 !   64.8   2.6   9.6e-22   8.6e-18       2     100 ..     312     410 ..     311     414 .. 0.97

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.32
                HCESEE CS
         PCI 56 kiyssi 61
                k+y+++
  EPX74765.1 90 KYYQQL 95
                333332 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.24
                 HTSHHHHHHHHHHH......HHHHHHHTTHHHHHHHHHHHHHHHHH CS
         PCI  12 sgnlsgfseelkdl......eeelladdglaqllesLekkvrerll 51 
                  +n+ +f+++l+++      e       +++   ++ ++   ++l+
  EPX74765.1 163 QKNYVKFKSLLRQMhlllsnE-------NTSV-TDQNRETHLLELY 200
                 566888888888883333331.......2222.2222222222222 PP

  == domain 3  score: 64.8 bits;  conditional E-value: 9.6e-22
                 HHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCESEEEHHHHHHHHTSSHHHHHHHHHHHHHTTSSSEEEETTTTE CS
         PCI   2 sysdllkalrsgnlsgfseelkdleeelladdglaqllesLekkvrerllrqvskiyssislerlaklldlsvdevEkilvklIrdgeirakidqesgi 100
                 +++ l++a++++++++++ +l ++++++++dd+++q++++    +r ++l +++++y++++l+ la++l++++d vE+ l+ lI dg+i++k+d  ++i
  EPX74765.1 312 AMTKLVEAYQKRDIKEVENLLHEHRQDIMEDDFIRQYVDKILYSIRSQVLLEMIQPYTTVQLSLLAEKLGVTTDIVEQSLIGLIMDGRIQGKLDMIHEI 410
                 6889******************************************************************************************87765 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.0     0.002        18      10      33 ..      80     103 ..      77     106 .. 0.85
   2 ?    2.9   0.0     0.015   1.3e+02       8      31 ..     206     229 ..     205     234 .. 0.85
   3 ?    1.3   0.0     0.051   4.5e+02       6      20 ..     244     258 ..     244     264 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.002
       TPR_7  10 srlGdyeeAielyeqsLaltkdpe 33 
                 +r+++ +e +++y+q+L+ ++ p+
  EPX74765.1  80 FRMNQLDEMLKYYQQLLEYAEWPS 103
                 589999*********998888776 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.015
       TPR_7   8 lysrlGdyeeAielyeqsLaltkd 31 
                 +ys+l d +++ e+y+ sL++  +
  EPX74765.1 206 MYSSLEDNKRLKEIYQSSLRIKTA 229
                 79***************9988765 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.051
       TPR_7   6 arlysrlGdyeeAie 20 
                 + ++ ++G+++eA +
  EPX74765.1 244 GKMHMQEGQWSEAQT 258
                 6789********976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (438 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1149  (0.0640861); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 3184.10
//
Query:       EPX74766.1  [L=95]
Description: 60S ribosomal protein L37 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.7e-27   93.2  14.0    1.4e-26   92.4  14.0    1.4  1  Ribosomal_L37e  Ribosomal protein L37e
     0.0056   16.7   1.6     0.0087   16.1   1.6    1.2  1  DZR             Double zinc ribbon
  ------ inclusion threshold ------
       0.14   11.6   2.8       0.35   10.4   2.8    1.6  1  zf-ribbon_3     zinc-ribbon domain
       0.14   12.1   1.4        0.2   11.7   1.4    1.2  1  HypA            Hydrogenase/urease nickel incorporation, meta
       0.17   11.8   3.5       0.31   10.9   3.5    1.4  1  DUF35_N         Rubredoxin-like zinc ribbon domain (DUF35_N)
       0.25   11.2   2.6       0.41   10.5   2.6    1.4  1  zf-C3HC4_2      Zinc finger, C3HC4 type (RING finger)
       0.32   10.5   5.7          5    6.7   2.9    2.2  2  DUF2688         Protein of unknown function (DUF2688)
        0.9    9.1   5.0        2.4    7.8   0.6    2.2  2  zn-ribbon_14    Zinc-ribbon
        1.1    9.2   5.4        1.6    8.6   5.4    1.2  1  zf-C3HC4        Zinc finger, C3HC4 type (RING finger)


Domain annotation for each model (and alignments):
>> Ribosomal_L37e  Ribosomal protein L37e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.4  14.0   6.8e-30   1.4e-26       1      54 []       2      54 ..       2      54 .. 0.98

  Alignments for each domain:
  == domain 1  score: 92.4 bits;  conditional E-value: 6.8e-30
  Ribosomal_L37e  1 tkGtssfGkrqkkktHilCrrCgkrsyhvqkktCascGypsaklrkynWsaKak 54
                    tkGt+s+Gkr  +k+H+lCrrCgkrs+h qk+tCascGypsak+r++nW+aKak
      EPX74766.1  2 TKGTTSMGKR-GNKSHTLCRRCGKRSFHKQKSTCASCGYPSAKTRRFNWGAKAK 54
                    8*********.999**************************************96 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   1.6   4.4e-06    0.0087      10      44 ..      14      47 ..       9      49 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 4.4e-06
         DZR 10 pdarfCseCgtklkavaaedrCpsCgekvdpearf 44
                ++   C +Cg++    +++ +C sCg++  ++ rf
  EPX74766.1 14 KSHTLCRRCGKRSF-HKQKSTCASCGYPSAKTRRF 47
                45678999999964.56699999999998888877 PP

>> zf-ribbon_3  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   2.8   0.00017      0.35       5      25 ..      19      40 ..      15      40 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00017
  zf-ribbon_3  5 CPnCGa.plssddnvCpyCGtk 25
                 C +CG+    ++ ++C++CG++
   EPX74766.1 19 CRRCGKrSFHKQKSTCASCGYP 40
                 779****99***********96 PP

>> HypA  Hydrogenase/urease nickel incorporation, metallochaperone, hypA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   1.4   9.8e-05       0.2      69      98 ..      15      43 ..       6      48 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 9.8e-05
                -EEEETTTS-EEECHHHHHS-TTTSSS-EE CS
        HypA 69 vkvrCreCgkefeleekalrCpkCgsadve 98
                 ++ Cr+Cgk+  +++k  +C +Cg  + +
  EPX74766.1 15 SHTLCRRCGKRSFHKQK-STCASCGYPSAK 43
                6789*****99887754.68****987655 PP

>> DUF35_N  Rubredoxin-like zinc ribbon domain (DUF35_N)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   3.5   0.00016      0.31      14      32 ..      19      38 ..      17      39 .. 0.95

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00016
     DUF35_N 14 CpdCGtvqfPPr.avCphCg 32
                C+ CG+  f ++   C  Cg
  EPX74766.1 19 CRRCGKRSFHKQkSTCASCG 38
                *******************8 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   2.6   0.00021      0.41      20      40 .]      16      37 ..      11      40 .. 0.93

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00021
  zf-C3HC4_2 20 HvfCqkCilrsLeekn.eCPlC 40
                H+ C+ C +rs ++++  C  C
  EPX74766.1 16 HTLCRRCGKRSFHKQKsTCASC 37
                ***********9999989*888 PP

>> DUF2688  Protein of unknown function (DUF2688)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   2.9    0.0025         5       8      16 ..      17      25 ..      14      33 .. 0.78
   2 ?    4.9   0.1    0.0088        18       9      32 ..      33      56 ..      30      61 .. 0.85

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0025
     DUF2688  8 TqCrRCGks 16
                T CrRCGk 
  EPX74766.1 17 TLCRRCGKR 25
                88*****95 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.0088
     DUF2688  9 qCrRCGkslstlsrSLlGldeLkq 32
                 C  CG +  +++r   G+ + + 
  EPX74766.1 33 TCASCGYPSAKTRRFNWGAKAKRR 56
                699***********9999887665 PP

>> zn-ribbon_14  Zinc-ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.3     0.026        52       3       8 ..      19      24 ..      17      29 .. 0.79
   2 ?    7.8   0.6    0.0012       2.4       2      10 ..      33      41 ..      32      44 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.026
  zn-ribbon_14  3 CerCGy 8 
                  C+rCG 
    EPX74766.1 19 CRRCGK 24
                  ****96 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0012
  zn-ribbon_14  2 kCerCGylS 10
                  +C  CGy S
    EPX74766.1 33 TCASCGYPS 41
                  8******99 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   5.4   0.00083       1.6      19      41 .]      16      37 ..      15      37 .. 0.95

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00083
                --B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4 19 HsfCskCirkilksrkkvkCPlC 41
                H++C+ C ++    ++k +C  C
  EPX74766.1 16 HTLCRRCGKRSFH-KQKSTCASC 37
                *************.99999***9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       704  (0.039266); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.36u 0.23s 00:00:00.59 Elapsed: 00:00:00.38
# Mc/sec: 752.99
//
Query:       EPX74767.1  [L=261]
Description: Bfr1 binding protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.8e-06   24.9  17.1    1.3e-05   24.4  17.1    1.2  1  Kre28           Spindle pole body component
     0.0041   17.3  22.0     0.0041   17.3  22.0    2.6  2  Tropomyosin_1   Tropomyosin like
     0.0097   16.1   2.8     0.0097   16.1   2.8    2.6  3  COG5            Golgi transport complex subunit 5
  ------ inclusion threshold ------
      0.015   14.9   1.4      0.015   14.9   1.4    2.5  3  Vac_Fusion      Chordopoxvirus multifunctional envelope prote
      0.041   14.5   3.1      0.041   14.5   3.1    3.1  3  YabA            Initiation control protein YabA
      0.048   13.0   1.0      0.097   12.0   1.0    1.4  1  DUF3379         Protein of unknown function (DUF3379)
      0.078   12.8   6.5       0.13   12.1   1.8    2.3  2  Synaptobrevin   Synaptobrevin
       0.26   10.1  22.8       0.14   11.0   9.4    2.1  2  DUF812          Protein of unknown function (DUF812)
       0.31   11.8  18.0       0.47   11.2   1.6    2.9  3  DUF4472         Domain of unknown function (DUF4472)
        1.6    9.0  18.6       0.28   11.4   2.1    3.2  3  Spc24           Spc24 subunit of Ndc80
        1.6    8.4  17.8       0.76    9.4   3.1    2.6  2  GrpE            GrpE
        2.3    8.3  19.7        3.4    7.7   5.1    3.0  3  ADIP            Afadin- and alpha -actinin-Binding
        2.3    8.0   5.1        6.5    6.5   0.3    2.4  2  USP8_interact   USP8 interacting
        3.1    7.1   6.2        6.3    6.1   6.2    1.6  1  DUF4407         Domain of unknown function (DUF4407)
        3.4    8.1  13.8       0.48   10.8   2.0    3.3  3  TSC22           TSC-22/dip/bun family
        4.8    7.8  14.3        1.7    9.3   4.6    3.0  2  Syntaxin-6_N    Syntaxin 6, N-terminal
        5.7    7.0  14.6        2.2    8.4   5.4    3.4  3  DivIVA          DivIVA protein
        6.8    7.2  26.4         36    4.9  13.8    2.7  2  APG6_N          Apg6 coiled-coil region
        7.7    6.7  18.2       0.55   10.4   2.8    2.5  2  CENP-Q          CENP-Q, a CENPA-CAD centromere complex subuni


Domain annotation for each model (and alignments):
>> Kre28  Spindle pole body component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4  17.1   1.3e-08   1.3e-05      75     262 ..      49     231 ..      29     257 .. 0.84

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 1.3e-08
       Kre28  75 sekikelnkLvelLklthleqEtLDnFlrYTisstdllqleSesDpkyvsleeeVseLedetltekeseieqikgeIkekgkelaekqdqinelyLett 173
                 ++  k+++++  +Lk  ++eq t   +lr  i ++ +l +e e  +k   le+ +seL+   l+++++e+e +k++I  +++e+aek d+  ++  et 
  EPX74767.1  49 EQELKKYKEFFSQLKFSYIEQGTKERYLR-AILDDPPLLVEPEDNEK---LESTISELKS-RLKQRKDEVELLKKKIISNCNEIAEKYDATLKESKETK 142
                 4678999**********************.56777889999998875...999*****96.799*********************************** PP

       Kre28 174 neideCwelLnEleelrdrrnkvekqtseekdteddlv.eetYeeWkslqkslqekeelkeeldrLkkekkeleevkkksknkeekdeev 262
                   + +   l  El++l  ++++++  +  + + +  l+ +e++e  +s++++  ++e  + +l++Lkk+   le+ +   ++k+++ +++
  EPX74767.1 143 ALLSDYRILEKELQSLD-QDDTTNIPALPDLEEKIPLLkQEIFETDNSIKSTNIQLERDELHLEQLKKNCSTLEKEHIDLQKKSNNLRKS 231
                 *****99999******9.777777777777775555543689*******9999*****9*********9999988776666666653333 PP

>> Tropomyosin_1  Tropomyosin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.2       1.8   1.7e+03      27      38 ..      42      53 ..       3      75 .. 0.59
   2 !   17.3  22.0   4.3e-06    0.0041      16     137 ..      92     231 ..      87     235 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 1.8
  Tropomyosin_1 27 eqenlekeqeik 38
                   eq+ l+ eqe+k
     EPX74767.1 42 EQSGLSTEQELK 53
                   333333333333 PP

  == domain 2  score: 17.3 bits;  conditional E-value: 4.3e-06
  Tropomyosin_1  16 aeeleekvKeleqenlekeqeiksLtkkn.qqleeevekleeklkeakekaee.sekkktnne................altrkiqlLEeeleesd 93 
                     e+le+ + el ++ +++ +e++ L+kk+ ++ +e  ek++++lke+ke++   s+ +  ++e                 l+ ki lL +e+ e+d
     EPX74767.1  92 NEKLESTISELKSRLKQRKDEVELLKKKIiSNCNEIAEKYDATLKESKETKALlSDYRILEKElqsldqddttnipalpDLEEKIPLLKQEIFETD 187
                    5889999*********************736777788*********99976541333333334556666789999********************* PP

  Tropomyosin_1  94 kkLkettekLretdvkaeelERkvkaLeqerdewekkyeeleek 137
                    +++k+t+ +L+  +++ e+l ++   Le+e+ +  kk ++l + 
     EPX74767.1 188 NSIKSTNIQLERDELHLEQLKKNCSTLEKEHIDLQKKSNNLRKS 231
                    **************************************999875 PP

>> COG5  Golgi transport complex subunit 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   2.8     1e-05    0.0097      57     121 ..      82     147 ..      30     153 .. 0.83
   2 ?    1.2   0.1       0.4   3.8e+02      80     111 ..     168     199 ..     151     214 .. 0.80
   3 ?    0.6   0.3      0.63   5.9e+02      67      86 ..     196     216 ..     172     235 .. 0.48

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-TTHHHHHHHHHH.HHHHHHHHHHHHHHHH CS
        COG5  57 hleLlehlskskslssvlselksslesLsasyerlkskvlepyeeaekl.qsalkrlhqtldLlrr 121
                  ++Ll + +++++l+s+ selks+l++ +  +e lk+k++   +e+ ++  ++lk   +t+ Ll +
  EPX74767.1  82 DPPLLVEPEDNEKLESTISELKSRLKQRKDEVELLKKKIISNCNEIAEKyDATLKESKETKALLSD 147
                 457888999*********************************99976551677999*****99986 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.4
                 XXXXXXXXXXXXX-TTHHHHHHHHHHHHHHHH CS
        COG5  80 slesLsasyerlkskvlepyeeaeklqsalkr 111
                  l +L++ +  lk+++ e  +++++ + +l+r
  EPX74767.1 168 ALPDLEEKIPLLKQEIFETDNSIKSTNIQLER 199
                 57788999999999999999999998888876 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.63
                 XXXXXX.XXXXXXXXXXXXXX CS
        COG5  67 skslss.vlselksslesLsa 86 
                 +++ ++ +l++lk++ + L++
  EPX74767.1 196 QLERDElHLEQLKKNCSTLEK 216
                 222222333333333333333 PP

>> Vac_Fusion  Chordopoxvirus multifunctional envelope protein A27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.2       1.3   1.2e+03      15      27 ..     116     128 ..      98     141 .. 0.60
   2 ?   -0.4   0.1      0.99   9.3e+02       3      29 ..     118     144 ..     116     158 .. 0.74
   3 ?   14.9   1.4   1.5e-05     0.015       3      54 ..     170     222 ..     168     224 .. 0.93

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 1.3
                 HHHHHHHHHHHHH CS
  Vac_Fusion  15 dfqlvikcckrvn 27 
                 + +++i++c + +
  EPX74767.1 116 LKKKIISNCNEIA 128
                 4445555555544 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.99
                 HHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Vac_Fusion   3 kdleerllvlekdfqlvikcckrvnea 29 
                 k+++     +++++  + k+ k+++  
  EPX74767.1 118 KKIISNCNEIAEKYDATLKESKETKAL 144
                 667777777888888888887777655 PP

  == domain 3  score: 14.9 bits;  conditional E-value: 1.5e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-XXXXXXXXXXXXXX.XXXXX CS
  Vac_Fusion   3 kdleerllvlekdfqlvikcckrvnealkRlEnHleTlRkamlaLak.KIDvQ 54 
                  dlee++  l+++  ++ ++ k +n +l+R E Hle l k+  +L k  ID Q
  EPX74767.1 170 PDLEEKIPLLKQEIFETDNSIKSTNIQLERDELHLEQLKKNCSTLEKeHIDLQ 222
                 589******************************************99458888 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1       3.8   3.6e+03      27      46 ..      32      51 ..      10      78 .. 0.61
   2 ?    3.2   3.8      0.15   1.4e+02       2      37 ..      91     126 ..      88     175 .. 0.69
   3 ?   14.5   3.1   4.3e-05     0.041       8      78 ..     188     257 ..     178     259 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 3.8
                HHHHHHHHHHHHHHHHHHHH CS
        YabA 27 lkeelaelleenaeLelene 46
                l ++ ++ ++e + L++e+e
  EPX74767.1 32 LADTASSSVNEQSGLSTEQE 51
                55555555555555555533 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.15
                 -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        YabA   2 dkkelfdkleeleeqleelleeleelkeelaellee 37 
                 d+++l ++++el+++l++ ++e+e lk+++ + ++e
  EPX74767.1  91 DNEKLESTISELKSRLKQRKDEVELLKKKIISNCNE 126
                 556677788888888888888888888877554433 PP

  == domain 3  score: 14.5 bits;  conditional E-value: 4.3e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        YabA   8 dkleeleeqleelleeleelkeelaelleenaeLeleneklrerleeeekkekekkkelsegkenLarlYe 78 
                 +++++ + qle+   +le+lk+++++l +e+ +L+   ++lr+ + + ++  ++ k++++  ++++  +Y+
  EPX74767.1 188 NSIKSTNIQLERDELHLEQLKKNCSTLEKEHIDLQKKSNNLRKSM-NMRSPGDDAKRKVQAWYTSMLDIYN 257
                 3466666788888899*****************************.5666677777888899999999997 PP

>> DUF3379  Protein of unknown function (DUF3379)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   1.0    0.0001     0.097       7      80 ..     117     196 ..     111     199 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.0001
     DUF3379   7 rrriladPkqqdeevleaakaseekakfvkdlkaldkklkqa.....lkvdvPedLaekl.llkqsleekaarkrktrva 80 
                 +++i+++ ++ +e+  + +k+s+e +++++d + l+k+l++       ++++  dL+ek+ llkq++ e +++ ++t+++
  EPX74767.1 117 KKKIISNCNEIAEKYDATLKESKETKALLSDYRILEKELQSLdqddtTNIPALPDLEEKIpLLKQEIFETDNSIKSTNIQ 196
                 7899***********************************975222226777889******66788888887777666655 PP

>> Synaptobrevin  Synaptobrevin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.2      0.11     1e+02       3      31 ..     104     132 ..     102     159 .. 0.85
   2 ?   12.1   1.8   0.00013      0.13       4      64 ..     175     235 ..     173     237 .. 0.82

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.11
                    XHHHHHHHHHHCCCCHHCCHHHHCHCCCC CS
  Synaptobrevin   3 dklakikaevdevkdimkeNidkvlerge 31 
                    ++l++ k+ev+  k+++++N +++ e+ +
     EPX74767.1 104 SRLKQRKDEVELLKKKIISNCNEIAEKYD 132
                    689999****************9998755 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 0.00013
                    HHHHHHHHHHCCCCHHCCHHHHCHCCCC.CHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH CS
  Synaptobrevin   4 klakikaevdevkdimkeNidkvlerge.kldeLvdktenLqssaqqFkkqarklkrkmwwk 64 
                    k+  +k+e+ e+ + +k+   + ler+e +l++L++  ++L+++  + +k++++l++ m ++
     EPX74767.1 175 KIPLLKQEIFETDNSIKSTNIQ-LERDElHLEQLKKNCSTLEKEHIDLQKKSNNLRKSMNMR 235
                    5666788888888887764444.5666559*****************************997 PP

>> DUF812  Protein of unknown function (DUF812)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   9.4   0.00015      0.14     277     401 ..      35     169 ..       2     172 .. 0.63
   2 ?    5.1   5.4     0.009       8.5     329     390 ..     173     234 ..     171     249 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00015
      DUF812 277 dlaellsefseksetdslktkgsrfthaeklqftke..............elakkaeteeelkkkreeeleelqeqieeleskieeleeeikklessik 361
                 + +++++e s   +t+++++k ++f ++ k+++                  ++     e e ++k e  ++el++++++ + ++e l+++i ++ ++i 
  EPX74767.1  35 TASSSVNEQSG-LSTEQELKKYKEFFSQLKFSY--IeqgtkerylraildDPP--LLVEPEDNEKLESTISELKSRLKQRKDEVELLKKKIISNCNEIA 128
                 11222222222.222223444444444444444..033455577766654323..333444456777899***************************** PP

      DUF812 362 qveeeleeekeeneelekevklkkktlell.pdaeeniekL 401
                 +  +++ +e +e++ l +++++ +k l+ l +d+ +ni +L
  EPX74767.1 129 EKYDATLKESKETKALLSDYRILEKELQSLdQDDTTNIPAL 169
                 ****************************9967788898877 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.009
      DUF812 329 eeeleelqeqieeleskieeleeeikklessikqveeeleeekeeneelekevklkkktlel 390
                 ee++  l+++i e++++i++ + ++++ e +++q+++++ ++++e   l+k+ ++ +k +++
  EPX74767.1 173 EEKIPLLKQEIFETDNSIKSTNIQLERDELHLEQLKKNCSTLEKEHIDLQKKSNNLRKSMNM 234
                 56777799999999999999999999999999999999999999999999988887777766 PP

>> DUF4472  Domain of unknown function (DUF4472)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1         3   2.8e+03      68      69 ..      48      49 ..       6      73 .. 0.59
   2 ?    8.8   4.6    0.0027       2.6      24      92 ..      93     161 ..      89     166 .. 0.77
   3 ?   11.2   1.6    0.0005      0.47      29      86 ..     175     232 ..     170     248 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 3
     DUF4472 68 le 69
                +e
  EPX74767.1 48 TE 49
                22 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.0027
     DUF4472  24 eqheaekfelknkvlalenrvlelelerekaaeeiqslrerlaeleeekke...leeeyvvlkknyqaleke 92 
                 e++e+++ elk+++   ++r  e+el ++k  ++ ++++e+++++ +e+ke   l   y +l+k++q+l ++
  EPX74767.1  93 EKLESTISELKSRL---KQRKDEVELLKKKIISNCNEIAEKYDATLKESKEtkaLLSDYRILEKELQSLDQD 161
                 899*********99...5555599999999888888888888887766655111556788999999988776 PP

  == domain 3  score: 11.2 bits;  conditional E-value: 0.0005
     DUF4472  29 ekfelknkvlalenrvlelelerekaaeeiqslrerlaeleeekkeleeeyvvlkkny 86 
                 ++  lk ++ + +n++ +++++ e+ +   ++l+++  +le+e+ +l+++   l+k++
  EPX74767.1 175 KIPLLKQEIFETDNSIKSTNIQLERDELHLEQLKKNCSTLEKEHIDLQKKSNNLRKSM 232
                 5555899999999999999999999999999999999999999999999998888875 PP

>> Spc24  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       3.9   3.6e+03      18      38 ..      43      63 ..      25      79 .. 0.61
   2 ?    4.5   5.7     0.044        41      13      49 ..      92     136 ..      89     166 .. 0.71
   3 ?   11.4   2.1    0.0003      0.28       2      44 ..     179     225 ..     178     259 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 3.9
       Spc24 18 selesleselaelkeeleele 38
                ++  s e+el++ ke + +l+
  EPX74767.1 43 QSGLSTEQELKKYKEFFSQLK 63
                333445555666665555555 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.044
       Spc24  13 lsdleselesleselaelkeeleeleeeseekeser........v 49 
                 +++les++++l+s+l++ k+e+e l+++  ++ +e+        +
  EPX74767.1  92 NEKLESTISELKSRLKQRKDEVELLKKKIISNCNEIaekydatlK 136
                 679*************************99944444332333332 PP

  == domain 3  score: 11.4 bits;  conditional E-value: 0.0003
       Spc24   2 ldnekfriakelsdleselesleselaelkeeleeleeesee....k 44 
                 l++e f++ +++++++ +le+ e +l++lk+++ +le+e  +    +
  EPX74767.1 179 LKQEIFETDNSIKSTNIQLERDELHLEQLKKNCSTLEKEHIDlqkkS 225
                 68899*********************************999965431 PP

>> GrpE  GrpE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   8.7      0.12   1.2e+02       5      55 ..      90     140 ..      42     166 .. 0.67
   2 ?    9.4   3.1   0.00081      0.76       5      74 ..     188     258 ..     151     260 .. 0.85

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.12
                 ..CTTTHHHHCCCCCCTTCHHHCTTSCCCCCCTTTTTTTTHHHHHHHHHHH CS
        GrpE   5 eeeeeeedeeeeleeeleelekevkelkekllrllaefenlrkrtekekee 55 
                 e++e++e ++ el+++l++ ++ev+ lk+k+    +e+ +    t ke +e
  EPX74767.1  90 EDNEKLESTISELKSRLKQRKDEVELLKKKIISNCNEIAEKYDATLKESKE 140
                 445555555555555555555555555555554444444443333333333 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00081
                 ..CTTTHHHHCCCCCCTTCHHHCTTSCCCCCCTTTTTTTTHHHHHHHHHH.HHHHHHHHHHHHHHHHHHHH CS
        GrpE   5 eeeeeeedeeeeleeeleelekevkelkekllrllaefenlrkrtekeke.eakkfaiekfakdLLpvlDn 74 
                 ++ ++++ ++e  e  le+l+k++  l+++   l+++  nlrk ++ +   + +k +++   +++L+++++
  EPX74767.1 188 NSIKSTNIQLERDELHLEQLKKNCSTLEKEHIDLQKKSNNLRKSMNMRSPgDDAKRKVQAWYTSMLDIYNQ 258
                 4455566666777777999**************************7776559999999999****999986 PP

>> ADIP  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   5.1    0.0037       3.4      68     116 ..      91     140 ..      86     147 .. 0.76
   2 ?    6.1   1.6     0.012        11      62     133 ..     128     198 ..     122     200 .. 0.86
   3 ?    4.1   6.0     0.047        44      64     118 ..     178     232 ..     171     244 .. 0.64

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0037
        ADIP  68 eierlqskierlktqleqlerelalvqakerqlekklktl.eqklkneke 116
                 ++e+l+s+i+ lk +l+q + e++l+++k  ++  ++++  +++lk+ ke
  EPX74767.1  91 DNEKLESTISELKSRLKQRKDEVELLKKKIISNCNEIAEKyDATLKESKE 140
                 89999999999999999999999999988877776666551445555554 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.012
        ADIP  62 irkleaeierlqskierlktqleqlerelalvqakerqlekklktleqklknekeelqrlknalqqiktqya 133
                  +k +a+++  +++++ l   +  le+el+++ ++++++  +l +le+k+  +k+e+  + n ++++  q++
  EPX74767.1 128 AEKYDATLKE-SKETKALLSDYRILEKELQSLDQDDTTNIPALPDLEEKIPLLKQEIFETDNSIKSTNIQLE 198
                 5566677666.788899999999***************************************9999988875 PP

  == domain 3  score: 4.1 bits;  conditional E-value: 0.047
        ADIP  64 kleaeierlqskierlktqleqlerelalvqakerqlekklktleqklknekeel 118
                  l+ ei    ++i++   qle+ e  l+++++++ +lek+  +l++k +n++ ++
  EPX74767.1 178 LLKQEIFETDNSIKSTNIQLERDELHLEQLKKNCSTLEKEHIDLQKKSNNLRKSM 232
                 5555666666666666666666666666666666666666666666666666555 PP

>> USP8_interact  USP8 interacting
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.3    0.0068       6.5      14      44 ..      93     123 ..      87     159 .. 0.75
   2 ?    3.3   0.7     0.066        62       6      58 ..     176     228 ..     171     255 .. 0.52

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0068
  USP8_interact  14 aelkkevaeqkqqlseqkrelellkeyiral 44 
                    ++l+++++e k++l+++k+e+ellk+ i + 
     EPX74767.1  93 EKLESTISELKSRLKQRKDEVELLKKKIISN 123
                    579999******************9877543 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.066
  USP8_interact   6 vqkqqqkiaelkkevaeqkqqlseqkrelellkeyiralrstnpvlraladql 58 
                    +   +q+i e ++++++++ ql++ + +le+lk+ + +l +    l++ +++l
     EPX74767.1 176 IPLLKQEIFETDNSIKSTNIQLERDELHLEQLKKNCSTLEKEHIDLQKKSNNL 228
                    55556666666666666666666666666666666666655553333332222 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   6.2    0.0067       6.3     130     223 ..      79     177 ..      18     231 .. 0.57

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0067
     DUF4407 130 a...............ltaelaeleaqiaalqaeidaaearldalraeaqkeldgtkgtgttgvaGkgpaakekkaqldaaqaelaelkakldatarla 213
                                 l+++++el++++++ + e++ +++++  + +e ++++d t          + +++k+  +++  +++el++l+++   t++++
  EPX74767.1  79 IlddppllvepednekLESTISELKSRLKQRKDEVELLKKKIISNCNEIAEKYDATL--------KESKETKALLSDYRILEKELQSLDQD--DTTNIP 167
                 055555555444455567777777777777777777777777777777777777544........34567778888888888888888887..444443 PP

     DUF4407 214 alraelaele 223
                 al +  +++ 
  EPX74767.1 168 ALPDLEEKIP 177
                 3333332221 PP

>> TSC22  TSC-22/dip/bun family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   2.0   0.00051      0.48      15      47 ..      91     123 ..      89     131 .. 0.87
   2 ?   -1.0   0.1       2.4   2.2e+03      14      25 ..     174     185 ..     170     201 .. 0.62
   3 ?    3.2   1.6      0.12   1.1e+02      17      45 ..     205     233 ..     199     236 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00051
       TSC22  15 eVevLkekIkeLeernseleeENslLkalaspe 47 
                   e L ++I eL +r ++ + E +lLk+ + ++
  EPX74767.1  91 DNEKLESTISELKSRLKQRKDEVELLKKKIISN 123
                 5599***********************987655 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 2.4
       TSC22  14 EeVevLkekIke 25 
                 E +  Lk++I e
  EPX74767.1 174 EKIPLLKQEIFE 185
                 344455666655 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.12
       TSC22  17 evLkekIkeLeernseleeENslLkalas 45 
                 e+Lk++   Le++   l++  + L++ ++
  EPX74767.1 205 EQLKKNCSTLEKEHIDLQKKSNNLRKSMN 233
                 99**********************98876 PP

>> Syntaxin-6_N  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   4.6    0.0018       1.7      34      92 ..      74     149 ..      11     158 .. 0.80
   2 ?    2.5   2.8      0.24   2.2e+02      41      69 ..     202     230 ..     151     252 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.0018
  Syntaxin-6_N  34 s................tseeldetrteLrkalrsiewdledLeetvriveknp..skfkidekelsrrrafveevr 92 
                   +                 +e+l++t +eL++ l++ + ++e L++ + i + n+  +k+  + ke ++ +a++++ r
    EPX74767.1  74 RylrailddppllvepeDNEKLESTISELKSRLKQRKDEVELLKKKI-ISNCNEiaEKYDATLKESKETKALLSDYR 149
                   2455555555566667789**************************99.66666665889999999999999888765 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.24
  Syntaxin-6_N  41 etrteLrkalrsiewdledLeetvrivek 69 
                    + ++L+k+++++e++  dL++  + ++k
    EPX74767.1 202 LHLEQLKKNCSTLEKEHIDLQKKSNNLRK 230
                   23478999999999999999987665555 PP

>> DivIVA  DivIVA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   5.4    0.0023       2.2      25      82 ..      74     134 ..      48     147 .. 0.77
   2 ?    2.4   0.3      0.16   1.5e+02      29      58 ..     126     158 ..     124     166 .. 0.68
   3 ?    2.8   0.5      0.12   1.2e+02      42      69 ..     205     232 ..     171     248 .. 0.70

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0023
                 HHHHHHHHHHHHHH..HHHHHHHHHHHCCCCTXXXXXXXXXXXXXXXXXX.XXXXXXXXXX CS
      DivIVA  25 eFLdqvakdyeall..keneelkekvkeleeklkeykeleetLkktlvva.qetaeevkan 82 
                 ++L  + +d   l+  ++ne+l+++++el+++lk+ k+  e Lkk ++++  e+ae+  a+
  EPX74767.1  74 RYLRAILDDPPLLVepEDNEKLESTISELKSRLKQRKDEVELLKKKIISNcNEIAEKYDAT 134
                 5677777777777633589*****************************8634566665544 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.16
                 HHHHHHHHHHHHHHHHHHHHHC...CCCTXXXX CS
      DivIVA  29 qvakdyeallkeneelkekvke...leeklkey 58 
                 ++a++y a lke++e k+ +++   le++l++ 
  EPX74767.1 126 EIAEKYDATLKESKETKALLSDyriLEKELQSL 158
                 799999999999999887654311155555555 PP

  == domain 3  score: 2.8 bits;  conditional E-value: 0.12
                 HHHHHHHHCCCCTXXXXXXXXXXXXXXX CS
      DivIVA  42 eelkekvkeleeklkeykeleetLkktl 69 
                 e+lk+++++le++  + ++  ++L+k++
  EPX74767.1 205 EQLKKNCSTLEKEHIDLQKKSNNLRKSM 232
                 3444555555555555555555555444 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9  13.8     0.038        36      21     123 ..      48     159 ..      42     164 .. 0.58
   2 ?    3.8  14.3     0.083        79      14      95 ..     131     229 ..     124     236 .. 0.51

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.038
      APG6_N  21 aekerdaYeeflkklkkekkeeek................qdeeleeleeeleklekeeeelleeLkelekereeleaelaaleeelealeeeeerfwr 103
                 +e+e ++Y+ef ++lk +  e+ +                + e+        ekle++ +el + Lk+ ++e e l++++ +  +e +++ +   ++ +
  EPX74767.1  48 TEQELKKYKEFFSQLKFSYIEQGTkerylrailddppllvEPED-------NEKLESTISELKSRLKQRKDEVELLKKKIISNCNEIAEKYDATLKESK 139
                 799*************5544433345567777655555554444.......555555555555555555555555555555555555555555555555 PP

      APG6_N 104 eynelqlelleleeeldsle 123
                 e ++l  +   le+el+sl+
  EPX74767.1 140 ETKALLSDYRILEKELQSLD 159
                 55555555555555555553 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.083
      APG6_N  14 ldkqleqaeker...daYeeflkklkkekkeeek..............qdeeleeleeeleklekeeeelleeLkelekereeleaelaaleeeleale 95 
                 +d  l+++++ +    +Y+  +k+l++ ++++++               ++e+ e++++++ ++ + e+ +  L++l+k+ + le+e  +l++++++l 
  EPX74767.1 131 YDATLKESKETKallSDYRILEKELQSLDQDDTTnipalpdleekiplLKQEIFETDNSIKSTNIQLERDELHLEQLKKNCSTLEKEHIDLQKKSNNLR 229
                 444444443333111456666666666655444466666665555555555555555555555555555555555555555555555555555555544 PP

>> CENP-Q  CENP-Q, a CENPA-CAD centromere complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   7.9      0.38   3.6e+02      26     110 ..      91     175 ..      87     194 .. 0.74
   2 ?   10.4   2.8   0.00058      0.55      57      95 ..     192     230 ..     187     248 .. 0.77

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.38
      CENP-Q  26 dfeklldekaaleaqLspelhslelLeaeiekeeralerdyeaLreLeknakaearerkeklkkehvllqesdseelslleassd 110
                 d ekl + + +l++ L+  ++ +elL++ i    ++ ++ y a  +  k++ka+ +  +  +k++  l q + ++   l++++++
  EPX74767.1  91 DNEKLESTISELKSRLKQRKDEVELLKKKIISNCNEIAEKYDATLKESKETKALLSDYRILEKELQSLDQDDTTNIPALPDLEEK 175
                 6788888889999999999999999999988777777777777777788888888888887888888888776666666666665 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00058
      CENP-Q  57 keeralerdyeaLreLeknakaearerkeklkkehvllq 95 
                      lerd+  L++L+kn++++++e+ + +kk+ +l +
  EPX74767.1 192 STNIQLERDELHLEQLKKNCSTLEKEHIDLQKKSNNLRK 230
                 55668*********************9997777666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2169  (0.120977); expected 358.6 (0.02)
Passed bias filter:                      697  (0.0388756); expected 358.6 (0.02)
Passed Vit filter:                        93  (0.00518713); expected 17.9 (0.001)
Passed Fwd filter:                        47  (0.00262145); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              19  [number of targets reported over threshold]
# CPU time: 0.78u 0.28s 00:00:01.06 Elapsed: 00:00:00.44
# Mc/sec: 1770.22
//
Query:       EPX74768.1  [L=386]
Description: tRNA-splicing endonuclease subunit catalytic subunit Sen2 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.7e-16   59.4   0.0    5.3e-16   58.4   0.0    1.5  1  tRNA_int_endo    tRNA intron endonuclease, catalytic C-termin
    7.4e-06   25.5   0.0      0.072   12.8   0.0    2.6  2  tRNA_int_endo_N  tRNA intron endonuclease, N-terminal domain


Domain annotation for each model (and alignments):
>> tRNA_int_endo  tRNA intron endonuclease, catalytic C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.4   0.0     6e-20   5.3e-16       1      78 [.     257     339 ..     257     344 .. 0.89

  Alignments for each domain:
  == domain 1  score: 58.4 bits;  conditional E-value: 6e-20
                    HHHHHHHHHHHHHTT-EEEECGGGTSSEEEETSCTTTSSCSEEEEEEETTSEE.....EHHHHHHHHHHHHHTTSEEEEEEET CS
  tRNA_int_endo   1 falkyavyrdLrekGyvvrsGlkFGadFrvYqrrpslehseylVvvvsedeel.....dwpdlsaavrlahsvkKklilaivd 78 
                    f+  +a+y ++r++G+vv+ G kF  d+++Y+r+p ++h+e+ ++v++   +      +w++l    r++ +vkK+l+l++v+
     EPX74768.1 257 FLVDLAAYYYFRQQGWVVKGGTKFSVDYLLYKRGPVFSHAELAILVLPCVGNSqkrnlKWHELHCLNRTVGQVKKTLVLCYVH 339
                    677899***************************************9874444444455***********************95 PP

>> tRNA_int_endo_N  tRNA intron endonuclease, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.0     6e-05      0.53       8      29 ..      58      79 ..      54      99 .. 0.89
   2 !   12.8   0.0   8.1e-06     0.072      34      57 ..     183     206 ..     172     216 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 6e-05
                     TEEEESSHHHHHHHHHTTT-SE CS
  tRNA_int_endo_N  8 drvlvedeeaakrlyekgfYGk 29
                     +++lv d e+++rl  +gf+Gk
       EPX74768.1 58 RSCLVTDREGIQRLWTNGFFGK 79
                     689******************9 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 8.1e-06
                      SSEEEEHHHHHHHHHTTSEEEETT CS
  tRNA_int_endo_N  34 epLqLslvEAlYLlekGklevvkg 57 
                      e LqL++ EA++L + G l+v+ +
       EPX74768.1 183 EHLQLTFPEAFFLSSLGNLTVTSS 206
                      78*******************944 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (386 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       584  (0.0325729); expected 358.6 (0.02)
Passed bias filter:                      431  (0.0240393); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 2939.89
//
Query:       EPX74769.1  [L=210]
Description: N-glycosylation protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      5e-38  130.8  13.6    4.5e-28   98.4   8.6    2.3  2  EOS1      N-glycosylation protein


Domain annotation for each model (and alignments):
>> EOS1  N-glycosylation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.4   8.6   2.5e-32   4.5e-28       6      95 ..      63     153 ..      61     167 .. 0.92
   2 !   35.5   0.1     5e-13   8.9e-09     140     174 ..     164     198 ..     157     199 .. 0.91

  Alignments for each domain:
  == domain 1  score: 98.4 bits;  conditional E-value: 2.5e-32
        EOS1   6 laslWslvsaylayslldsLlvrWlvyYsilaaliRllslqaiiwplvllllsvlsad.keqplaaWivisttltlseivqswvtSnlada 95 
                 +++lW++vs yl+++l++++l +Wl++Ysi++++iRllsl++i +++v+l ++++++  ++  l aWi is+++t+s+ivq+w+tS ++ +
  EPX74769.1  63 TSALWTIVSGYLSFVLTTGFLLKWLIHYSIAPTIIRLLSLNVISFSFVSLSVNFITHGdNSLLLPAWIAISCFQTASYIVQDWITSPITRT 153
                 689****************************************************998688899************************754 PP

  == domain 2  score: 35.5 bits;  conditional E-value: 5e-13
        EOS1 140 ertsskrtldleeivvravvPvgvlsfltmviLlr 174
                 ++ s++++ld+ ei+v+avvPvg++sf+tm++Ll+
  EPX74769.1 164 NSLSNRHNLDFLEITVFAVVPVGIASFFTMLMLLW 198
                 67899*****************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       666  (0.0371465); expected 358.6 (0.02)
Passed bias filter:                      296  (0.0165096); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1652.59
//
Query:       EPX74770.1  [L=302]
Description: SAM-dependent methyltransferase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-24   86.4   0.0    1.1e-23   84.2   0.0    1.8  1  FtsJ      FtsJ-like methyltransferase
  ------ inclusion threshold ------
      0.023   15.0   0.0       0.05   13.9   0.0    1.5  1  DUF3362   Domain of unknown function (DUF3362)
       0.05   13.3   0.0      0.088   12.5   0.0    1.3  1  PCMT      Protein-L-isoaspartate(D-aspartate) O-methyltransfe


Domain annotation for each model (and alignments):
>> FtsJ  FtsJ-like methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.2   0.0   1.9e-27   1.1e-23       9     171 ..      63     286 ..      62     291 .. 0.91

  Alignments for each domain:
  == domain 1  score: 84.2 bits;  conditional E-value: 1.9e-27
                 HHHHHHHHT-S-TT-EEEECT-TTSHHHHHHCCT.T.-SEEEEEESSSSHHHTTEEEECS-CCCSSHHHHHCHCHHH...................... CS
        FtsJ   9 LleidekfklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpmaplpgvttiqgditdpetiekikealse...................... 85 
                 L +i+ek ++f pg+ v+ lg++PG w  v+++ +g +g+vv+vD+ p + + ++++iqg++++++ +++i +a  +                      
  EPX74770.1  63 LKHIHEKENIFAPGQLVINLGSSPGIWNNVASEYIGSEGRVVSVDIIPSRSPANCSMIQGNFLSMAIQDEIVKAGLRarrlqealvqygdpssipylql 161
                 789*********************************9********************************998764447888889999************ PP

                 .................SSEEEEEE--S-.....................SS-CHHHHHHHHHCCCCHHHHCCHCCCCECCCEEEECCCHCCCHHHHHH CS
        FtsJ  86 .................rkvdlvvsDgap.....................dvsgvhdldeylqsqLllaalelalkllkpggtfvlkifrgeeteallk 146
                                   ++d+++sD+                       + ++ +++d++ ++ L++++l +al+ lk+ gtf++k+++g++   ll+
  EPX74770.1 162 aleheetaekqesllkeLCADVIISDLNRpfpmvqgfefsiskrpymamrNRELLTVKDHLDSLFLAQSSLVFALRGLKQSGTFLCKVVNGPNLPTLLE 260
                 **************99999********9669******************999*********************************************** PP

                 HHHCCEEEEEEEE-S.S--CCG-EEE CS
        FtsJ 147 qlkkfFekvsvvkPk.ssrsesseef 171
                 +l  +F+kv+ +  k  s++++s ++
  EPX74770.1 261 DLTMCFSKVNKHVIKgVSGNDNSVVY 286
                 ********986655524444444444 PP

>> DUF3362  Domain of unknown function (DUF3362)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   8.4e-06      0.05      38      68 ..     134     165 ..     125     170 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 8.4e-06
     DUF3362  38 vr.gekerrlhkAllrYhdpknwpllreALkk 68 
                 v+ g + rrl+ Al++Y dp+  p l+ AL++
  EPX74770.1 134 VKaGLRARRLQEALVQYGDPSSIPYLQLALEH 165
                 4415699*********************9986 PP

>> PCMT  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.5e-05     0.088      72     109 ..      74     111 ..      59     122 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.5e-05
                 -TT-EEEEES-TTSHHHHHHHHHHCTTCEEEEEESBHH CS
        PCMT  72 kkgarvLevGsGsGyltavlarlvgekgrvvsierike 109
                  +g+ v+++Gs  G+   v ++++g++grvvs++ i++
  EPX74770.1  74 APGQLVINLGSSPGIWNNVASEYIGSEGRVVSVDIIPS 111
                 68999*****************************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       566  (0.031569); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.28s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 2065.78
//
Query:       EPX74771.1  [L=201]
Description: hypothetical protein SOCG_02252 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
       0.15   12.1   2.0       0.24   11.5   2.0    1.3  1  Ubiq_cyt_C_chap  Ubiquinol-cytochrome C chaperone
       0.72    9.8   7.2       0.16   11.9   1.5    2.5  2  DUF896           Bacterial protein of unknown function (DUF89
        1.3    8.5   7.4        1.5    8.3   7.4    1.2  1  Exonuc_VII_L     Exonuclease VII, large subunit
          2    8.4   5.0        2.6    8.0   5.0    1.2  1  Neur_chan_memb   Neurotransmitter-gated ion-channel transmemb
        2.6    8.5   9.0        3.6    8.1   5.8    2.6  2  UPF0449          Uncharacterised protein family UPF0449
        2.8    8.6  14.2        2.8    8.6   7.3    2.7  3  YabA             Initiation control protein YabA
        2.9    8.1  13.6        7.4    6.7   3.9    3.0  3  bZIP_1           bZIP transcription factor


Domain annotation for each model (and alignments):
>> Ubiq_cyt_C_chap  Ubiquinol-cytochrome C chaperone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   2.0   9.4e-05      0.24       8      76 ..     113     181 ..     109     194 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 9.4e-05
  Ubiq_cyt_C_chap   8 tfagrfqllvlhtwlllrRlkaegpegreieqelldkffedvdeklreegvgdlsvpkrmkklaeafyg 76 
                      + ++r+q+++l +++      +e++e +++ +el+  +   +  +l ++++++  ++k++++++++  +
       EPX74771.1 113 EANERLQMTLLQMAISDTVSEKEQEEMEAVRKELIREIMGSSKSRLLQMEIENKDLKKSISEMQKYITK 181
                      5799********************999************************************998765 PP

>> DUF896  Bacterial protein of unknown function (DUF896)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.4      0.22   5.7e+02      11      24 ..      90     103 ..      87     130 .. 0.68
   2 ?   11.9   1.5   6.2e-05      0.16      16      54 ..     129     167 ..     120     174 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.22
      DUF896  11 kkkktegLTeeEke 24 
                 k +kte L ++Ek 
  EPX74771.1  90 KQNKTESLGDNEKD 103
                 56799999999985 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 6.2e-05
      DUF896  16 egLTeeEkeeqkkLRkeYlkafraslksqlenvkvvDee 54 
                    +e+E+ee ++ Rke ++++ +s ks l ++++ +++
  EPX74771.1 129 DTVSEKEQEEMEAVRKELIREIMGSSKSRLLQMEIENKD 167
                 67799******************************9987 PP

>> Exonuc_VII_L  Exonuclease VII, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   7.4    0.0006       1.5     159     256 ..      82     182 ..      25     197 .. 0.61

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0006
  Exonuc_VII_L 159 aikrlleekkqrleklasrlkspeellerkrqrldeleerleralkkq......lkkkrerleelkerl.kekleekkerlkklkerlelleekker 248
                     ++ l+ek+++ e+l     ++e+ + +++qrl+e++erl+ +l +        +k++e++e ++++l +e + + k+rl +++ + + l+++ ++
    EPX74771.1  82 TSSTILTEKQNKTESL----GDNEKDIMNENQRLKEANERLQMTLLQMaisdtvSEKEQEEMEAVRKELiREIMGSSKSRLLQMEIENKDLKKSISE 174
                   2233444444444444....34455555555555555555555444334444447788889999999998888888888887776666656666555 PP

  Exonuc_VII_L 249 leeleekl 256
                   ++++++k+
    EPX74771.1 175 MQKYITKI 182
                   55555544 PP

>> Neur_chan_memb  Neurotransmitter-gated ion-channel transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   5.0     0.001       2.6      98     221 ..      60     186 ..      22     188 .. 0.66

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.001
                     HTTHHHHHHC--------------.--------------------------------------SS---TTGGG--.........-----TTTTTH CS
  Neur_chan_memb  98 vfldklprllfmkrpsevkdnekklssgasseaeelilskskseskkaklseeqgsekastckckckegeeaspstqlsk....eelspelkkav 188
                     ++   +p l + ++ s+++d++ + +  ++++++  +l +++++ ++++++ ++ +e+ +    +   + ++s+++q +     +el +e+    
      EPX74771.1  60 LCESDVPFLYMNENFSTARDRNTSSTILTEKQNKTESLGDNEKDIMNENQRLKEANERLQMTLLQMAISDTVSEKEQEEMeavrKELIREIMGSS 154
                     44555555555555555666666555555556666666666666666555555555555444444444444444444444334445555554444 PP

                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Neur_chan_memb 189 egvkyiadhlraededksvkedwkyvamviDri 221
                      + +  + +++++d +ks++e  ky+++ +Dr 
      EPX74771.1 155 -KSRLLQMEIENKDLKKSISEMQKYITKIVDRC 186
                     .478899************************96 PP

>> UPF0449  Uncharacterised protein family UPF0449
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   5.8    0.0014       3.6      27      87 ..      62     124 ..      56     152 .. 0.84
   2 ?    0.4   0.9      0.36   9.2e+02      83      99 ..     134     150 ..     124     193 .. 0.68

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0014
     UPF0449  27 edDvvftilsdsve..edkkassseeedleaeveelYeqvrtylelnerLeeakeeLkqkcee 87 
                 e+Dv f  ++++++  +d ++ss+  ++ +++ e+l    +  ++ n+rL+ea+e+L+  + +
  EPX74771.1  62 ESDVPFLYMNENFStaRDRNTSSTILTEKQNKTESLGDNEKDIMNENQRLKEANERLQMTLLQ 124
                 7899*******99977677777767777888899***********************977555 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.36
     UPF0449  83 qkceeLktageeLeeei 99 
                 ++ ee++++++eL +ei
  EPX74771.1 134 KEQEEMEAVRKELIREI 150
                 44555666666655554 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.1      0.73   1.9e+03      26      53 ..      34      73 ..      22      95 .. 0.61
   2 ?    8.6   7.3    0.0011       2.8      17      71 ..      87     144 ..      70     152 .. 0.75
   3 ?    3.3   1.5      0.05   1.3e+02      30      51 ..     157     178 ..     137     197 .. 0.49

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.73
                HHHHHHHHHHHHHHHHHHHHHHHHHHH............X CS
        YabA 26 elkeelaelleenaeLeleneklrerl............e 53
                ++k++  +    n+e   + ++lr++l            +
  EPX74771.1 34 TIKDQARSKSSINTEYFSDADSLRKELcesdvpflymneN 73
                5666666666667777777777887776655555555441 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0011
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH......XXXXXXXXXXXXXXXXXXX CS
        YabA  17 leelleeleelkeelaelleenaeLeleneklrerl......eeeekkekekkkelsegke 71 
                 l+e +++ e+l ++ +++++en++L+  ne+l+ +l      +   + ++++++e++  ++
  EPX74771.1  87 LTEKQNKTESLGDNEKDIMNENQRLKEANERLQMTLlqmaisD---TVSEKEQEEMEAVRK 144
                 5677899999************************998885441...333333344444444 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.05
                 HHHHHHHHHHHHHHHHHHHHHH CS
        YabA  30 elaelleenaeLeleneklrer 51 
                 +l ++  en++L+   +++++ 
  EPX74771.1 157 RLLQMEIENKDLKKSISEMQKY 178
                 3333333333333333333332 PP

>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       4.2   1.1e+04      42      55 ..      46      59 ..      44      61 .. 0.68
   2 ?    6.7   3.9    0.0029       7.4      24      54 ..      90     120 ..      88     126 .. 0.90
   3 ?    6.7   0.7     0.003       7.7      35      58 ..     158     181 ..     153     185 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 4.2
                HHHHHHHHHHHHHH CS
      bZIP_1 42 NksLkseleelkke 55
                N+++ s +++l+ke
  EPX74771.1 46 NTEYFSDADSLRKE 59
                66666777777776 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0029
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  24 KqaeieeLerrvkaLekeNksLkseleelkk 54 
                 Kq ++e L +  k + +eN+ Lk+ +e+l+ 
  EPX74771.1  90 KQNKTESLGDNEKDIMNENQRLKEANERLQM 120
                 999************************9975 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.003
                 HHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  35 vkaLekeNksLkseleelkkevek 58 
                   ++e eNk+Lk+ ++e++k + k
  EPX74771.1 158 LLQMEIENKDLKKSISEMQKYITK 181
                 557889************998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2611  (0.14563); expected 358.6 (0.02)
Passed bias filter:                      585  (0.0326287); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 1381.68
//
Query:       EPX74772.1  [L=309]
Description: oligosaccharyltransferase gamma subunit [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.9e-73  246.4   1.7    4.6e-73  246.1   1.7    1.0  1  OST3_OST6      OST3 / OST6 family, transporter family
    4.5e-07   29.8   0.0    6.8e-07   29.2   0.0    1.3  1  Thioredoxin    Thioredoxin
  ------ inclusion threshold ------
      0.038   14.4   0.0      0.086   13.3   0.0    1.6  1  Thioredoxin_2  Thioredoxin-like domain
      0.085   11.6   0.0       0.12   11.2   0.0    1.1  1  MtaB           Methanol-cobalamin methyltransferase B subunit
        1.4    8.8   3.9        2.6    7.9   3.9    1.4  1  Lig_chan       Ligand-gated ion channel


Domain annotation for each model (and alignments):
>> OST3_OST6  OST3 / OST6 family, transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  246.1   1.7   1.3e-76   4.6e-73       3     293 .]      23     305 ..      21     305 .. 0.97

  Alignments for each domain:
  == domain 1  score: 246.1 bits;  conditional E-value: 1.3e-76
   OST3_OST6   3 llklakksngviklndenykellkgprdysvvvllTatspqfkCelCrefepefelvakswrkdekskskklfFakvdfdegkdvFqklglnsaPhlll 101
                 l++ a+++ gvi +    ++++++g++d ++v+l+   +  ++Ce+Cr +ep+f+++a s++++ +  ++ + F+ +df ++k++F+++g++++P++++
  EPX74772.1  23 LNSRADDN-GVIAIAGRLFQRIVTGKQDHTTVALFSVDATTMNCEICRLIEPQFKALAYSYKQK-YGLDSGIRFVYADFGKNKNLFEQFGIETVPNFWV 119
                 56666666.*******************************************************.999******************************* PP

   OST3_OST6 102 fppkkgpkeskkkdtydfsrggfdaealakfisertgvkirikrppnyskiiitallvlllvlllklrrklllkilksktlwavlslliillftsGymf 200
                 f+pk+       +   d+s +g da++la+ + + tg+  +i    + +k  ++++ ++l++++l++ rk ll++++s+++wa+ls++++++  sG+mf
  EPX74772.1 120 FKPKT--V---VPIAADLS-NGVDADKLAALVLKETGKGAPIVYRQDPAKKYASLVSTVLCGAALFFTRKMLLNVFTSRKVWAALSIITVITLSSGFMF 212
                 ***44..3...78999998.599**************************************************************************** PP

   OST3_OST6 201 nqIrgvpfvakdekggisyfaggsqnQfgaEtqivallygllallvilLiklvpriknakvqrvlvivllvlifllfslllslfriKnpgYpy 293
                 ++Ir  p+ +++e+g+  ++ag++q+QfgaE+q+v+l+y++l++++i+L+ ++p+++ ak+q ++++++lv+++l +s+l+ +f++K + Yp+
  EPX74772.1 213 TRIRFSPYSQRGEHGENLWLAGSQQYQFGAEVQVVSLIYTALTMSTIFLAVIAPKVQGAKRQTLFIFFWLVVLWLGYSFLVDVFQRKMQMYPF 305
                 ****************99**************************************************************************8 PP

>> Thioredoxin  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.2   0.0   1.9e-10   6.8e-07      22     100 ..      57     144 ..      32     147 .. 0.84

  Alignments for each domain:
  == domain 1  score: 29.2 bits;  conditional E-value: 1.9e-10
                  EEEEE-TTSHHHHCHHHHHHHHHHHCTT......TSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTE...EEEEEESS-HHHHHHHH CS
  Thioredoxin  22 lveFyApwCghCkalaPeleklaeelkd......kvklakvdvdenedlakkyevegiPtlklfkngk...evkkyegarekeklaaf 100
                   v+ +   C  C+ ++P++++la  +k+       ++++  d  +n++l +++++e +P++ +fk       +++++ + +++klaa 
   EPX74772.1  57 SVDATTMNCEICRLIEPQFKALAYSYKQkygldsGIRFVYADFGKNKNLFEQFGIETVPNFWVFKPKTvvpIAADLSNGVDADKLAAL 144
                  46667778*******************99999999******************************99877666777777777877765 PP

>> Thioredoxin_2  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   2.4e-05     0.086      12     108 ..      60     144 ..      48     145 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 2.4e-05
  Thioredoxin_2  12 ftdpdCpyCkklkkelkel.ddvtvrvllfplkpsfepkavaiwcakekkkafkdieenvelarkygvrgtPtivfldgk...eivarlpGyvpae 103
                     t+ +C  C++++ ++k l  +++++     ++ ++ + +v  +  k+k+           l +++g++ +P ++++ +k    i+a l   v+a+
     EPX74772.1  60 ATTMNCEICRLIEPQFKALaYSYKQK-----YGLDSGIRFVYADFGKNKN-----------LFEQFGIETVPNFWVFKPKtvvPIAADLSNGVDAD 139
                    56778999999999999996666666.....6777666666666666665...........9***********66555554988888888888888 PP

  Thioredoxin_2 104 eleal 108
                    +l+al
     EPX74772.1 140 KLAAL 144
                    88876 PP

>> MtaB  Methanol-cobalamin methyltransferase B subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   3.3e-05      0.12      68     133 ..      40     105 ..      29     117 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 3.3e-05
        MtaB  68 leravelglPavvlEtEhvqqmtenpewgaevakaqkeileeyedkyglksalratiaDiReeeea 133
                 ++r+v+ +    ++    v  +t+n e+++ +  + k+    y++kygl s +r   aD+ ++++ 
  EPX74772.1  40 FQRIVTGKQDHTTVALFSVDATTMNCEICRLIEPQFKALAYSYKQKYGLDSGIRFVYADFGKNKNL 105
                 566666666666677778999**************************************9888765 PP

>> Lig_chan  Ligand-gated ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   3.9   0.00072       2.6       3      89 ..     193     291 ..     191     294 .. 0.73

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.00072
                 XXX..XXXXTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..........XXXHHHHHHHHH..HHHHHHHHHHHXXXXXXXXXXXXXXXXXXXXXXXXX CS
                 xxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..........xxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    Lig_chan   3 evW..lsvlvalilvsivlflverfspyewrepeeaaet..........veneftlsnslw..fslgalvqqGcdesprsvsgRivvavWwffvlills 87 
                 +vW  ls++++++l s ++f   rfspy+ r+++ +  +             e+++++ ++  +++++++ +    +++      + +++w++vl l  
  EPX74772.1 193 KVWaaLSIITVITLSSGFMFTRIRFSPYSQRGEHGE--NlwlagsqqyqFGAEVQVVSLIYtaLTMSTIFLAVIAPKVQGAKRQTLFIFFWLVVLWLGY 289
                 68832356888888999999999********87432..2357777777744455555444311677888888899999****************98876 PP

                 XX CS
                 xx RF
    Lig_chan  88 sY 89 
                 s+
  EPX74772.1 290 SF 291
                 66 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (309 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       774  (0.0431703); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2247.25
//
Query:       EPX74773.1  [L=311]
Description: coenzyme A/diphosphate transporter [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.6e-64  212.4   4.4    4.6e-21   74.5   0.2    3.1  3  Mito_carr  Mitochondrial carrier protein
  ------ inclusion threshold ------
      0.012   15.6   0.5        4.5    7.3   0.1    2.5  2  UcrQ       UcrQ family
       0.19   12.1   0.0         19    5.7   0.0    2.3  2  CM_1       Chorismate mutase type I


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.5   0.2   7.8e-25   4.6e-21       4      94 ..      19     105 ..      17     108 .. 0.94
   2 !   70.5   0.1   1.4e-23   8.4e-20       2      95 ..     112     214 ..     111     216 .. 0.83
   3 !   68.2   0.1   7.1e-23   4.3e-19       2      94 ..     217     309 ..     216     311 .] 0.97

  Alignments for each domain:
  == domain 1  score: 74.5 bits;  conditional E-value: 7.8e-25
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlll 94 
                 svl ++l+Gg++++++ +vt Pl+++K+ +q+q++++ +s    i+++++ki+k eG++g++rG++ n+lr +p+ a++f++y  lk+l l
  EPX74773.1  19 SVLVSVLSGGTGASLSRTVTSPLERMKIIFQVQSNNEYNS----IFSTVSKIWKREGILGFFRGNGTNCLRAFPYGAVQFATYSGLKQLTL 105
                 68899*****************************997653....*******************************************9865 PP

  == domain 2  score: 70.5 bits;  conditional E-value: 1.4e-23
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS........HHHHHHHHHHHH.HHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   2 elsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaa........ildvlkkiykee.GlrglyrGllpnllrvapasalkfvlyetlkr 91 
                 +l+ +++l+ G+++g+ +++ t+Pld+++trl +q     k   +         ++++l++iy++e G+++ly+Gl ++ll v+p+ ++ f++ye +k+
  EPX74773.1 112 DLNNYERLVFGAISGVSSVVSTYPLDIARTRLSIQTAGLVKVSMNDgcnthsanLMSTLRTIYRNEgGIAALYSGLPATLLNVVPYVSIVFFTYEWCKE 210
                 5678999***************************55553333322234444455*********976268****************************** PP

                 HHCT CS
   Mito_carr  92 lllk 95 
                 +++ 
  EPX74773.1 211 YFFS 214
                 9975 PP

  == domain 3  score: 68.2 bits;  conditional E-value: 7.1e-23
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
   Mito_carr   2 elsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlll 94 
                 +l+vl++l  Gg++g va+++++P dv++ r+q+++  +   ++++i d++ kiy +eGl g++rG+  nll+++p  ++++ ++et+ +++ 
  EPX74773.1 217 DLNVLEKLSLGGFSGFVAQTFAFPADVLRRRFQVNRIPGIGYHYTSIPDAIVKIYSKEGLFGFFRGYFSNLLKIIPVMSITWYTFETVNKVFS 309
                 67899************************************************************************************9986 PP

>> UcrQ  UcrQ family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.1    0.0017        10      43      65 ..     189     211 ..     177     214 .. 0.85
   2 ?    7.3   0.1   0.00076       4.5      30      65 ..     272     307 ..     265     311 .] 0.88

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0017
                 TTHHHHHHHHHHHHHHHHHHHHH CS
        UcrQ  43 sqvlyvlppfiiayliykwakee 65 
                 +++l v+p + i++++y+w+ke+
  EPX74773.1 189 ATLLNVVPYVSIVFFTYEWCKEY 211
                 67899****************97 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.00076
                 TTTSSSSTTCTTTTTHHHHHHHHHHHHHHHHHHHHH CS
        UcrQ  30 lskaifntlrRtksqvlyvlppfiiayliykwakee 65 
                  ++++f ++r + s++l ++p + i++++++  ++ 
  EPX74773.1 272 SKEGLFGFFRGYFSNLLKIIPVMSITWYTFETVNKV 307
                 57899*************************999886 PP

>> CM_1  Chorismate mutase type I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.0    0.0031        19      22      75 ..     100     154 ..      93     172 .. 0.89
   2 ?    4.0   0.0      0.01        61      53      83 ..     237     267 ..     233     271 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0031
                 HHHHHHHHHHHTT--G.GGEEEEEEEE-TT--SS-CCHHHHHSTTGTSSEEEEEE CS
        CM_1  22 vkeLleelleeNelke.edivsviftvTkDldaafPaaaaReklgleevpllcaq 75 
                  k+L  +  ++N+l++ e++v   ++  + + +++P  +aR++l++++  l++++
  EPX74773.1 100 LKQLTLQTSSRNDLNNyERLVFGAISGVSSVVSTYPLDIARTRLSIQTAGLVKVS 154
                 5788889999****98799**************************9999998765 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.01
                 SS-CCHHHHHSTTGTSSEEEEEEB---TTS- CS
        CM_1  53 aafPaaaaReklgleevpllcaqeievegsl 83 
                  afPa ++R++++++++p +  + +++++++
  EPX74773.1 237 FAFPADVLRRRFQVNRIPGIGYHYTSIPDAI 267
                 58****************9888888877766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (311 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       385  (0.0214736); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 2216.73
//
Query:       EPX74774.1  [L=187]
Description: 60S ribosomal protein L18 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.3e-89  295.9   6.5    9.2e-89  295.8   6.5    1.0  1  Ribosomal_L18   Ribosomal protein 60S L18 and 50S L18e
    3.4e-06   27.7   0.2    3.2e-05   24.6   0.2    2.3  1  Ribosomal_L27A  Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27


Domain annotation for each model (and alignments):
>> Ribosomal_L18  Ribosomal protein 60S L18 and 50S L18e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  295.8   6.5     1e-92   9.2e-89       1     187 []       2     187 .]       2     187 .] 0.98

  Alignments for each domain:
  == domain 1  score: 295.8 bits;  conditional E-value: 1e-92
  Ribosomal_L18   1 gidlkekkkkkskrkapksenvylklLvklyrfLarRtdskFnkvvlkrLfmsrinrpplslsrlvkkvkkkee..ekkiavvvgtvtdDvrllev 94 
                    gid+++++ +ks+r++p senvylklLvklyrfLarRtds+Fnk++lkrLf+s++nrpp+s+s++++ +++k++  e+k++v vgtvtdD+r+l+v
     EPX74774.1   2 GIDIERHHVRKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKTILKRLFQSKTNRPPISISKIAALTSRKASdlEGKTVVTVGTVTDDERMLTV 97 
                    89**88888**********************************************************999988889******************** PP

  Ribosomal_L18  95 PklsvaALrftetararilkaGGeiltlDqLalraPtGkntvLlrGkkkareavkhfgaapgvphshkkpyvrskgrkfekargrrksrgfkv 187
                    PklsvaALrft++ararilkaGGe++tlDqLalraPtG+ntvLlrG+k+area++hfg+   +ph+hk p+vrs+grkfe+argrrksr+fkv
     EPX74774.1  98 PKLSVAALRFTKSARARILKAGGEVMTLDQLALRAPTGSNTVLLRGRKHAREAFRHFGF---GPHKHKAPHVRSEGRKFERARGRRKSRAFKV 187
                    **********************************************************9...*****************************96 PP

>> Ribosomal_L27A  Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.2   3.6e-09   3.2e-05      35     127 ..      47     123 ..      29     124 .. 0.74

  Alignments for each domain:
  == domain 1  score: 24.6 bits;  conditional E-value: 3.6e-09
                     ....---GGG..---EEEEHHHHHHTTTTGTTS------EEEGGGTTTTSSS....SEEEE--S.---.-.-EEEESEE-HHHHHHHHHTT-EEE CS
  Ribosomal_L27A  35 lpkrGfknskfkkeykvvnlkdLdelideerleladeaeeidleelaeaglikkkdgvKvlgkg.eltkk.lkvkaskfSkkAkekIeaaGGkve 127
                     + kr f+   +k+++++++++++  l +++  +l ++++++++ ++                ++  lt + l+v a +f+k+A+++I +aGG+v+
      EPX74774.1  47 ILKRLFQ---SKTNRPPISISKIAALTSRKASDL-EGKTVVTVGTV--------------TDDErMLTVPkLSVAALRFTKSARARILKAGGEVM 123
                     3344443...45899*********9999998875.37899999999..............333325566449*********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       450  (0.025099); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1346.31
//
Query:       EPX74775.1  [L=675]
Description: 6-phosphofructo-2-kinase [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.7e-76  255.0   0.1      7e-76  254.4   0.1    1.2  1  6PF2K       6-phosphofructo-2-kinase
    1.7e-25   89.8   0.0    1.9e-21   76.6   0.0    2.5  3  His_Phos_1  Histidine phosphatase superfamily (branch 1)
    8.6e-05   22.5   0.0    0.00015   21.6   0.0    1.3  1  DUF2313     Uncharacterised protein conserved in bacteria (DU
    0.00039   20.6   0.1     0.0021   18.2   0.0    2.3  3  AAA_33      AAA domain
  ------ inclusion threshold ------
      0.089   12.2   0.0       0.26   10.7   0.0    1.8  2  KTI12       Chromatin associated protein KTI12


Domain annotation for each model (and alignments):
>> 6PF2K  6-phosphofructo-2-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  254.4   0.1     2e-79     7e-76      11     223 .]     198     412 ..     191     412 .. 0.96

  Alignments for each domain:
  == domain 1  score: 254.4 bits;  conditional E-value: 2e-79
                 .S-EEEEEESSTTSSHHHHHHHHHHHHHHTT--EEEEEHHHHHHHHHSS.---GGGGSTT-HHHHHHHHHHHHHHHHHHHHHHHTS--SEEEEES---S CS
       6PF2K  11 nsklvivlvGLpargKtyiskkltrylkwlgvrtkvFnvgkyrreaska.lsdaeffrpdneealklreklalaalkdllaylneeegqvaifDAtNtt 108
                 ++klvi++vGLpargK+yi +kl+ry +wl +++k Fnvg++rr+ +++   da+ff+p+n+e  klre +a+++l  ll+++++e+g v+ifDAtN+t
  EPX74775.1 198 EEKLVIIMVGLPARGKSYIVNKLVRYYNWLQYNCKAFNVGNFRRQQASHqRDDASFFDPSNPETSKLREDMAMNTLTALLDWFENENGVVGIFDATNST 296
                 579*****************************************987764889********************************************** PP

                 HHHHHHHHHHHHHTT.-EEEEEEEE--HHHHHHHHHHHHTTTSGGGTTS-HHHHHHHHHHHHHHHHTT-----.TTTTTTSEEEEEETTTTEEEEE--- CS
       6PF2K 109 rerRklilefveenn.lkvlflesicsdeeiikeNikevklsspDYkdketeeaikdflkRlenyekqyepld.deedeelsyIkvidvgkslvvnnvq 205
                   rRk ++e +++   + +lf+esic+de++i++N++ ++++ pDY + ++e+++ df +R++ ye++yepl   eed +l+yIkvi+vgk++v++n++
  EPX74775.1 297 SSRRKAVVEHLKNVPyVTTLFIESICNDEQLIAANMRMKLFG-PDYRNMDPEKSLRDFQERVRLYEQKYEPLGkFEEDLNLRYIKVINVGKKVVAFNIR 394
                 ************9985789***********************.*****************************97899********************** PP

                 SHHHHHHHHHHTT---S- CS
       6PF2K 206 gylqsrivyyllNihlkp 223
                 g+l+++ v++llN++l p
  EPX74775.1 395 GFLAGQAVFFLLNFNLSP 412
                 *************99875 PP

>> His_Phos_1  Histidine phosphatase superfamily (branch 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       1.6   5.7e+03     107     127 ..     338     358 ..     326     359 .. 0.69
   2 !   10.5   0.0    0.0001      0.36       1      42 [.     415     454 ..     415     462 .. 0.85
   3 !   76.6   0.0   5.4e-25   1.9e-21      47     192 ..     516     660 ..     508     662 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 1.6
                 HHH-GGG-BS-BHHHHHHHHH CS
  His_Phos_1 107 dpadvrppggEsledvaaRva 127
                 +p+  ++ +  sl+d+++Rv+
  EPX74775.1 338 GPDYRNMDPEKSLRDFQERVR 358
                 555445555779*******96 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.0001
                 EEEEE---BTTB--....TT----B-HHHHHHHHHHHHHHTT CS
  His_Phos_1   1 lyLvRHGetewnaegrlqgrtdvpLteeGreqAealaerlag 42 
                 ++++RHGe+  n+ gr++g  ++ Lt +G++  e la ++++
  EPX74775.1 415 IWVTRHGESVDNTLGRIGG--NASLTSLGKQYGEDLAMFIEA 454
                 799************9988..578999999999998877665 PP

  == domain 3  score: 76.6 bits;  conditional E-value: 5.4e-25
                 EEEE-SSHHHHHHHHHHHHCTT--EEE-GGGS----GGGTT-B.HHHHHH..HSHHHHHHHHH-GGG-B..S-BHHHHHHHHHHHHHHHHHHTTTSEEE CS
  His_Phos_1  47 aiysSplkRarqTaeliaealglpveldegLrEidfGdweglttaeiaeeypeeleawlrdpadvrppg..gEsledvaaRvaaaleelaarhegetvl 143
                  +++S +kR ++Ta+ + ++ + +++    L+Ei+ G++++lt+++i+++ypee+ea+  d+ ++r+pg  gEs+ dv  R+++++ e+++  +   vl
  EPX74775.1 516 SVWTSMMKRSMETAAYFDDE-QYDIKAMRMLNEICSGVCDQLTYEQIENTYPEEYEARALDKLNYRYPGsgGESYLDVIYRLQSVIVEIERMKHH--VL 611
                 479*************9985.89******************************************************************999975..** PP

                 EEE-HHHHHHHHHHHHT--GGGGGGB---TT-EEEEEE-SS-EEEEEEE CS
  His_Phos_1 144 vVsHggvirallarllglpleelrrleldnaslsvlefdeggwrlvrln 192
                 v+ H  + r+++a++lg+  e++ +l+++ ++++ +e ++ g ++ ++n
  EPX74775.1 612 VIGHRVITRIIIAYFLGCRREDIAHLNVPLHTVYCIEPQPYGTNFYQYN 660
                 ***************************************9999887776 PP

>> DUF2313  Uncharacterised protein conserved in bacteria (DUF2313)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   4.2e-08   0.00015      32      96 ..     258     324 ..     243     371 .. 0.92

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 4.2e-08
     DUF2313  32 easaddllkelfpetatelLkdWEkvlglpd..nssetleeRRaavlaklnekgglsiayikklaes 96 
                 + ++++l +++  +t+t lL+++E+  g+    +++++ + RR+av++ l++   +++ +i++++++
  EPX74775.1 258 NPETSKLREDMAMNTLTALLDWFENENGVVGifDATNSTSSRRKAVVEHLKNVPYVTTLFIESICND 324
                 567899**********************999999999************************999876 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1       1.3   4.5e+03      29      54 ..      35      61 ..      35      82 .. 0.68
   2 !   18.2   0.0     6e-07    0.0021       1      99 [.     202     312 ..     202     359 .. 0.64
   3 ?   -3.1   0.0       2.3   8.2e+03      85     115 ..     434     463 ..     424     463 .. 0.76

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1.3
      AAA_33 29 ssdtlrrrlfg.tdqqsktdytrvldr 54
                ss+tl++rl + +d+qs++ ++r+l++
  EPX74775.1 35 SSPTLSQRLHNsKDVQSPRLPSRFLQN 61
                689999999998888888877776655 PP

  == domain 2  score: 18.2 bits;  conditional E-value: 6e-07
      AAA_33   1 lvllvGlpGsGKstlaerllkklg.....avllssdtlrrrlfgtdqqskt.......dytrvldr.lyqilnelarkalsagrn.vildatnlsrrer 85 
                 ++++vGlp+ GKs+ + +l++        +   +  ++rr+ +  ++++ +       + ++++++ + ++l +l++    +++   i+datn + ++r
  EPX74775.1 202 VIIMVGLPARGKSYIVNKLVRYYNwlqynCKAFNVGNFRRQQASHQRDDASffdpsnpETSKLREDmAMNTLTALLDWFENENGVvGIFDATNSTSSRR 300
                 89*****************9776655555555555557776666555544466666653344443337777777776555444333688********** PP

      AAA_33  86 arflklarrlgvpv 99 
                 +++++ ++  +vp 
  EPX74775.1 301 KAVVEHLK--NVPY 312
                 *****999..7763 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 2.3
      AAA_33  85 rarflklarrlgvpvrivvvetdeetlkeRl 115
                  a + +l +++g +++++++e+ +++ ++Rl
  EPX74775.1 434 NASLTSLGKQYG-EDLAMFIEAKRAEFQDRL 463
                 566777888999.999999999999999996 PP

>> KTI12  Chromatin associated protein KTI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   7.4e-05      0.26       4      96 ..     203     310 ..     201     353 .. 0.64
   2 ?   -3.0   0.0       1.1   3.9e+03     115     137 ..     559     581 ..     545     583 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 7.4e-05
                 EEEE--TTSSHHHHHHHHHHHHHH..............TT--EEEE-THHHH.TTSSS--GGGHHHHHHHHHHHHHHHHTT.SEE.EE-S---SHHHHH CS
       KTI12   4 vvltGlPssGKstrakeLakalee..............ekrsvvviddeslgiekdsykdsakekalRsslrsavkrdLskekvV.IvDslnyikgfRY 87 
                 +++ GlP+ GKs ++++L ++ +               ++++ +  dd+s+   +++ +++ +e ++ + l +  +   +++ vV I D++n + + R 
  EPX74775.1 203 IIMVGLPARGKSYIVNKLVRYYNWlqynckafnvgnfrRQQASHQRDDASFFDPSNPETSKLREDMAMNTLTALLDWFENENGVVgIFDATNSTSSRRK 301
                 899******************999555665555555544444444444444444444444445555555555555444444444457777777777776 PP

                 HHHHHHHHT CS
       KTI12  88 eLyciakaa 96 
                  +    k++
  EPX74775.1 302 AVVEHLKNV 310
                 666666655 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.1
                 HHHHTT-S..S-HHHHHHHHHH- CS
       KTI12 115 wneereekeeyekelldaLiqRy 137
                  + e++ +eeye+  ld+L  Ry
  EPX74775.1 559 EQIENTYPEEYEARALDKLNYRY 581
                 44677777889999999999999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (675 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       885  (0.0493614); expected 358.6 (0.02)
Passed bias filter:                      597  (0.033298); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.69u 0.29s 00:00:00.98 Elapsed: 00:00:00.44
# Mc/sec: 4643.56
//
Query:       EPX74776.1  [L=246]
Description: fungal protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-05   24.9   0.1    3.9e-05   23.8   0.1    1.6  1  HIG_1_N   Hypoxia induced protein conserved region


Domain annotation for each model (and alignments):
>> HIG_1_N  Hypoxia induced protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.1   2.2e-09   3.9e-05      19      51 ..     124     156 ..     110     157 .. 0.69

  Alignments for each domain:
  == domain 1  score: 23.8 bits;  conditional E-value: 2.2e-09
     HIG_1_N  19 glrsmkrgdskqsnrlmraRiaaQaftvlalva 51 
                 ++ + +++  +  ++l +aR++aQ++tvl+l++
  EPX74776.1 124 MYAASRNRYDTLPQKLVQARMYAQGVTVLVLLG 156
                 2333444455699*****************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       612  (0.0341346); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.31s 00:00:00.88 Elapsed: 00:00:00.54
# Mc/sec: 1364.51
//
Query:       EPX74777.1  [L=372]
Description: rho-type GTPase activating protein [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.7e-22   77.8   0.5    1.9e-21   76.5   0.5    1.6  1  RhoGAP       RhoGAP domain
      9e-19   68.0   4.5      2e-18   66.9   4.5    1.6  1  CRAL_TRIO_2  Divergent CRAL/TRIO domain
      5e-05   23.1   0.7    0.00014   21.6   0.7    1.8  1  CRAL_TRIO    CRAL/TRIO domain


Domain annotation for each model (and alignments):
>> RhoGAP  RhoGAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.5   0.5   3.2e-25   1.9e-21      11     148 ..     194     332 ..     186     336 .. 0.93

  Alignments for each domain:
  == domain 1  score: 76.5 bits;  conditional E-value: 3.2e-25
                 HHHHTTTSTTTTTS-S-HHHHHHHHHHHHHTGGGCTTTTTSCHHHHHHHHHHHHHHSSSTTTTGGHHHHHHHHHTS..SSHHHHHHHHHHHHT.TS-HH CS
      RhoGAP  11 iekrgldtegiyRvsgskarvkelreafdkgkavdsdleeedvhavaslLKrfLrelpepLltkelyeelieaaks..edeeerlealkelle.kLPke 106
                 + ++ ld++g++R s sk++++ l e ++++  v  dle++ v + ++l+K  +r+   pL+t++++e+l +a+++  ++ ++ l  l++ +e ++ ++
  EPX74777.1 194 VIRNSLDVQGLFRRSSSKKHLDILIELYENQCIV--DLESFGVFSACALIKYIFRSTSMPLFTNTFVEDLSKAQDEylHETNDSLVFLRAFVErNMDET 290
                 66899****************************9..8**********************************98777667778889999999999***** PP

                 HHHHHHHHHHHHHHHHHTHHHH---HHHHHHHHHHHHHT-TS CS
      RhoGAP 107 nrdtLryLlehLkrvaenskenkMtaknLaivfaPtLlrpks 148
                  ++  ry++++L ++ ++++en M+++nL i+++P++l++++
  EPX74777.1 291 SQKAARYIFSLLFEIDKHQEENLMNSQNLIICVGPSFLQSND 332
                 **************************************9975 PP

>> CRAL_TRIO_2  Divergent CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.9   4.5   3.3e-22     2e-18       3     137 ..      20     151 ..      18     152 .. 0.90

  Alignments for each domain:
  == domain 1  score: 66.9 bits;  conditional E-value: 3.3e-22
  CRAL_TRIO_2   3 pVfvfiaafllsska.dldkllryvlhtladkivgke..yvlVyfhtglssenkpslswlkkvystlprrykknlkklyivhpstfvktllktvlsaf 97 
                  +V+v++ afl++  +    ++++ + +++ +++v+++  y+ V+f++  +    p l++++k+y  ++  ++k++k++++vh+ + +++++   l  f
   EPX74777.1  20 KVLVVVTAFLKPLLDsGVTDIIQRIYDRV-RELVSADenYTAVFFSHESN--ILPYLNFCTKAYMNMDYYLHKRVKAVHVVHSDWVSRMAI-RTLLSF 113
                  7999999999555554899**********.888888889*********54..799************************************.555667 PP

  CRAL_TRIO_2  98 vsskfrkkveyvsrleeLarkidrtqllkslPegvvshde 137
                  vs+kf++k++y s+l++La+++ ++ql  +lP  +++ d+
   EPX74777.1 114 VSPKFYQKFHYSSSLSHLAKHVPLQQL--KLPVMIYEFDR 151
                  7**************************..***88888775 PP

>> CRAL_TRIO  CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.7   2.4e-08   0.00014      91     152 ..      82     140 ..       6     142 .. 0.81

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 2.4e-08
   CRAL_TRIO  91 ilqdnyperlgkilivnaPklfkfafklvkpfldektreKikfvspsnteatlekyidpeql 152
                  +  +  +r++ +++v++ ++ ++a++++ +f+++k+ +K+++ s+    + l k+++ +ql
  EPX74777.1  82 NMDYYLHKRVKAVHVVHSDWVSRMAIRTLLSFVSPKFYQKFHYSSS---LSHLAKHVPLQQL 140
                 45567789************************************77...467*******998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (372 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       583  (0.0325172); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 2720.23
//
Query:       EPX74778.1  [L=193]
Description: hypothetical protein SOCG_02260 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       883  (0.0492498); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1368.48
//
Query:       EPX74779.1  [L=262]
Description: adaptor protein Ste4 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      4e-15   56.0   0.1    8.7e-15   54.9   0.1    1.6  1  SAM_1     SAM domain (Sterile alpha motif)
    3.7e-13   49.4   0.1    7.4e-13   48.4   0.1    1.5  1  SAM_2     SAM domain (Sterile alpha motif)
    4.6e-09   36.8   0.0    7.9e-09   36.0   0.0    1.4  1  RA        Ras association (RalGDS/AF-6) domain
  ------ inclusion threshold ------
      0.016   15.3   0.9      0.016   15.3   0.9    2.0  2  bZIP_1    bZIP transcription factor
      0.049   14.3   3.0      0.056   14.2   0.9    2.2  2  FliD_N    Flagellar hook-associated protein 2 N-terminus
      0.075   13.1   0.9      0.075   13.1   0.9    1.8  2  bZIP_2    Basic region leucine zipper
        3.3    7.6   6.3        1.9    8.3   1.0    2.2  2  DivIC     Septum formation initiator


Domain annotation for each model (and alignments):
>> SAM_1  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.9   0.1   3.4e-18   8.7e-15       3      64 .]       9      69 ..       8      69 .. 0.98

  Alignments for each domain:
  == domain 1  score: 54.9 bits;  conditional E-value: 3.4e-18
                TTHSSHHHHHHHTTSGGGHHHHHTTTSSHHHHTTSCHHHHHHCTTTSHHHHHHHHHHHHHHH CS
       SAM_1  3 wsvedVgeWLesiglgqYadlFrageidgdaLlllteddLeklgvtllGHrkkIlyaIqrLk 64
                ws e V+ W+e++g++ Y++ F+++ i g++L l++++dL+++gv ++GHr+ Il+aI++Lk
  EPX74779.1  9 WSNEAVCSWIEQLGFP-YKSIFQENCILGKTLVLINSNDLRDMGVLSIGHRLDILSAIHDLK 69
                **************95.*******************************************98 PP

>> SAM_2  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.4   0.1   2.9e-16   7.4e-13       4      66 .]       9      69 ..       6      69 .. 0.97

  Alignments for each domain:
  == domain 1  score: 48.4 bits;  conditional E-value: 2.9e-16
                HHHHHHHHHHHHTTTGGGHHHHHHTTCSHHHHHTTSCHHHHHHTTHHHHHHHHHHHHHHHHHH CS
       SAM_2  4 wsledvaeWLrsiglkqytdnFrdagitgaelllrlteedLkrlGitsvghrkkilkkiqelk 66
                ws+e v++W +++g+  y+ +F ++ i g + l  ++ +dL ++G+ s ghr+ il++i +lk
  EPX74779.1  9 WSNEAVCSWIEQLGF-PYKSIFQENCILG-KTLVLINSNDLRDMGVLSIGHRLDILSAIHDLK 69
                ***************.9************.*****************************9986 PP

>> RA  Ras association (RalGDS/AF-6) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.0   0.0   3.1e-12   7.9e-09       3      91 ..     173     261 ..     171     262 .] 0.89

  Alignments for each domain:
  == domain 1  score: 36.0 bits;  conditional E-value: 3.1e-12
                 CEEEEEETTT-TT..EEEE.EEETTSBHHHHHHHHHHHCT-.GGGGCCEEEECCCTTTTEEEEE-TTSBCHHHHCCC-TTTSTCEEEEEEC CS
          RA   3 gvlkVytedlkpgttyksi.kvsststaqeViealLekfgl.edspedyvLveskerggeerkLdddecplqiqlqwkkreeslrFvLrek 91 
                 + l V ++ + ++t++k + k + +s+  eV+  +L+k+++ ++++ +y+L   + ++g+e++++ d +plq ++ ++k+++s +F+L +k
  EPX74779.1 173 FDLEVNDQAPLNTTESKKVpKMTVNSSYHEVLTSTLQKYRIdPSTWLSYEL--LLSYDGKEHPISTDMKPLQYFRSLQKHGKSPSFILSRK 261
                 5677888888877744444378999**************************..9**********************************987 PP

>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.3      0.67   1.7e+03      37      54 ..      75      92 ..      65     102 .. 0.59
   2 ?   15.3   0.9   6.1e-06     0.016      27      61 ..     102     136 ..      95     139 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.67
                HHHHHHHHHHHHHHHHHH CS
      bZIP_1 37 aLekeNksLkseleelkk 54
                + +keN+   +e ++ ++
  EPX74779.1 75 QAKKENMRSTQETDNCEE 92
                334555555555555554 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 6.1e-06
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  27 eieeLerrvkaLekeNksLkseleelkkevekLks 61 
                 +  +Le+r + Le+eN++L +++++l+ e   L+ 
  EPX74779.1 102 SLLALEKRIDYLEAENAKLVKTINSLNSEFLPLLR 136
                 5678***********************99766665 PP

>> FliD_N  Flagellar hook-associated protein 2 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.9   2.2e-05     0.056      23      94 ..     106     181 ..      58     183 .. 0.68
   2 ?   -1.8   0.1         2   5.2e+03      57      76 ..     188     207 ..     179     212 .. 0.59

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.2e-05
                 XXXXXXXXXXXHHH.HHHHHHHHHHHHHHH.H.HHXX.GGGGGXEEEEECSTTTEEEEEETTS-SEEEEEEEEE-- CS
      FliD_N  23 leqkktklewkqsa.yrelnsklsnlksal.s.alsk.sstfsakkatssdesvvtatassgaaagsysieVkqlA 94 
                 le++   le++ ++ ++++ns  s++   l + al+  +++f +  + s+++s+++ + ss ++ags+++eV+  A
  EPX74779.1 106 LEKRIDYLEAENAKlVKTINSLNSEFLPLLrKlALNFkETKFINSDTCSENSSIFQPSQSSPTVAGSFDLEVNDQA 181
                 4444444444433213334444444444332234544477777778889999********************9866 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 2
                 GGGGGXEEEEECSTTTEEEE CS
      FliD_N  57 sstfsakkatssdesvvtat 76 
                 s+++ +++++ss  +v+t t
  EPX74779.1 188 SKKVPKMTVNSSYHEVLTST 207
                 34444556666666666665 PP

>> bZIP_2  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.2       2.3   5.8e+03      22      32 ..      76      86 ..      71      89 .. 0.61
   2 ?   13.1   0.9   2.9e-05     0.075      21      53 ..      97     129 ..      93     130 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 2.3
                HHHHHHHHHHH CS
      bZIP_2 22 kkkakeeelee 32
                 kk+++++++e
  EPX74779.1 76 AKKENMRSTQE 86
                45555555554 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 2.9e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_2  21 ekkkakeeeleervkeLeeeNaqLrqkveqLek 53 
                 e+ k+    le+r+ +Le+eNa+L + + +L+ 
  EPX74779.1  97 ERVKLSLLALEKRIDYLEAENAKLVKTINSLNS 129
                 89999999****************999988875 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   1.1     0.097   2.5e+02      29      50 ..      69      90 ..      58      99 .. 0.81
   2 ?    8.3   1.0   0.00076       1.9      19      53 ..      96     129 ..      91     132 .. 0.73

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.097
                HHHHHHHHHHHHHHHHHHHCC- CS
       DivIC 29 lqaelaklkaeneeLeaevkdL 50
                ++ ++++ k+en++ ++e ++ 
  EPX74779.1 69 KESHNEQAKKENMRSTQETDNC 90
                5789999999999999998876 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00076
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-XXX CS
       DivIC  19 ykqlkqeiaalqaelaklkaeneeLeaevkdLksd 53 
                 + ++k  + al++ ++ l aen++L + ++ L ++
  EPX74779.1  96 QERVKLSLLALEKRIDYLEAENAKLVKTINSL-NS 129
                 56667777788888888888888888888888.44 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (262 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1611  (0.0898544); expected 358.6 (0.02)
Passed bias filter:                      713  (0.039768); expected 358.6 (0.02)
Passed Vit filter:                        68  (0.00379274); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.53u 0.28s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 1751.89
//
Query:       EPX74780.1  [L=764]
Description: hypothetical protein SOCG_02262 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.7e-137  459.8  15.6     2e-137  459.6  15.6    1.0  1  Utp8      Utp8 family


Domain annotation for each model (and alignments):
>> Utp8  Utp8 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  459.6  15.6  1.1e-141    2e-137       1     686 []       1     764 []       1     764 [] 0.95

  Alignments for each domain:
  == domain 1  score: 459.6 bits;  conditional E-value: 1.1e-141
        Utp8   1 mpslsepfrlaeLpriaslsnlseqvvvlqvasenfsessnkidvgisgsiIsqYilkptPkLiwsyplpsttivsccdvlekeenseelwlvglserk 99 
                 m+s++e ++l+e +  + +++++ +++ ++va en++ess+ ++v+i++++I+ Y+l+++ +L++s+plp++ti+sc++++ +e+ns+++w++++s+++
  EPX74780.1   1 MASFGELSLLGEVSVSSTVEKKNGYRSSGTVALENGQESSSFVAVQIEKHGIEIYNLREE-RLFASCPLPEKTIFSCKPMYLHEGNSHYIWACTSSAKS 98 
                 9***********************************************************.************************************** PP

        Utp8 100 k.eskLlliekekeeteddkteeetsseyevklkkkvvsikisskkkqivvvlenGsielldfelklleslksskknkklvetfiedeekelllvvsks 197
                 + e+kLl        +++++ +e+ ++++++ ++k+++si+++ ++ q+v+v+ nG++++ld+e++ ++s +s +++++l++t  ++++     vv k 
  EPX74780.1  99 RgEWKLLS-------WKHNELQEHGEVRFRDLSNKPIFSIQFIASSGQLVLVFTNGEVSFLDPEDDMIQSAASIQGSATLFQTGCVSKQ-----VVPKT 185
                 ********.......9***********************************************************************88.....66665 PP

        Utp8 198 kkkvayklisledesskilelsst.iledfklesakfcYqfGkLYqlkkdkke...isvyslp.................................... 256
                 +++ + +  ++  + +   ++ +    + +++++++ +Y    LY+l+ +k++   +sv+s++                                    
  EPX74780.1 186 EENEENNSSNM--DGKTQSQIGEDlLPSVNSSTTTTNIYL---LYALNIEKIKqfyVSVFSTSekrflytkpielgsssppthvlltkncenifaffpk 279
                 55556666666..444444444440445555678899***...********989999999999************************************ PP

        Utp8 257 ............sfqlqktislpsiiekkeelvslkpistnrvlLtvknkiyLldlkfesilserelthkktfqllksavvsvkgsst.tsktlalyvs 342
                             s+q+ k+++l+       +l+++ +i ++++l+++kn+++L+dl++++i+++++++++ +f++++++ +++++s + t+ t+++++ 
  EPX74780.1 280 nvfiyasnesngSYQRVKSFQLEDM----PALSNVDLIFDKFCLVQTKNQVSLWDLTYGTIQDVFDTENDIAFITVTINGNPSRRSGSkTNTTISGNII 374
                 *************************....8********************************************************999********** PP

        Utp8 343 lknkkn....pttslevinidvGlgklkesLGKsltkse.....e.tksknlksLfdedlkesskkdesleleevlkkLkelkekkdiekfdsifvkfl 431
                 l +kk+    p+t+++v+++++++gk+k ++G++ltk e     + tkskn ++L+++ lk+ + +d sl  +++l++L++  ++kd e+fd++f+kf+
  EPX74780.1 375 LLQKKTiaslPFTMPSVMSLADAIGKRKAKIGRILTKPEtiadgAlTKSKNSVTLCEQLLKNVQLQDTSL--RNELQQLQTFVQTKDGESFDAKFLKFV 471
                 *******************************************966*********************995..*************************** PP

        Utp8 432 knkkefetekdr.....fvvdieFvekvldliFekfedeef...vP.ketLtYLLthPLFPleytkgLlkllkenprLlk....qAivtCpnlplkeLl 517
                 +  +++++++++     +v++i+Fv+++++++F+ ++++++   +P k+tL+YLL+++LF              ++++l+    ++i++C    +++++
  EPX74780.1 472 EGFQTQNSTNRKllktnSVLPIPFVHAIESILFSPNQEQDLdllCPaKATLNYLLRNRLF--------------TSSILRlhpsRSIFNC----IYKFQ 552
                 ************************************9999999*****************..............56666666669*****....***** PP

        Utp8 518 kelftikneelllDiilrilqdfsadeIkqelkkllqseksk.............................vd.lenlinfliklnneeska.....ql 581
                 ke + +         +l+++ d+ a e+ +++kk+l s+k+k                             +d l +li++ i+ ++++++       l
  EPX74780.1 553 KESALL---------LLERTLDLPAFEVGCAIKKALSSMKTKllkigllrlsqfdsaeaqeallltlaqedFDlLFKLICASITGKKTSVPLnldmeIL 642
                 ******.........9*****************************************************99999888************9999***9** PP

        Utp8 582 fqllslvlDsiGl.....fnleletlekLssiidekvealeansynLtlvsqvllkkkkkkakkkk.........v..enteLasLLkiknksalkekk 664
                 ++ +s vlD++G+     +n++++t+++L+s +++k+++l+a+s++L++vs+++++kkk+ a++++         v  ++++La+LLk   k+ ++e++
  EPX74780.1 643 IYTASTVLDAMGVggiaaSNENQNTAQELYSGLQSKITSLTAMSLVLPAVSELIKHKKKATAENTFvhpnpqpkaVvdDRADLATLLK---KDGMAEQR 738
                 ***************************************************************999888776655168**********...88899*** PP

        Utp8 665 kkdsqrerkkklpi....YsvEkLei 686
                 k++sqr+r+k+l++    Y++E+Lei
  EPX74780.1 739 KNKSQRARGKELDMtigrYTIERLEI 764
                 ************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (764 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       735  (0.040995); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.25s 00:00:00.92 Elapsed: 00:00:00.46
# Mc/sec: 4973.73
//
Query:       EPX74781.1  [L=198]
Description: GTPase Spg1 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      4e-34  117.6   0.4    4.7e-34  117.3   0.4    1.0  1  Ras          Ras family
      5e-26   91.3   0.5    7.8e-26   90.6   0.1    1.5  2  Roc          Ras of Complex, Roc, domain of DAPkinase
    2.1e-08   33.8   0.2    2.3e-08   33.7   0.2    1.1  1  Arf          ADP-ribosylation factor family
    1.4e-07   31.1   0.7    1.7e-07   30.9   0.7    1.1  1  Gtr1_RagA    Gtr1/RagA G protein conserved region
    1.4e-05   24.1   0.3        0.1   11.4   0.0    2.0  2  DLIC         Dynein light intermediate chain (DLIC)
    0.00085   18.9   0.3     0.0042   16.7   0.3    1.8  1  GTP_EFTU     Elongation factor Tu GTP binding domain
     0.0055   16.8   0.0     0.0083   16.2   0.0    1.5  1  MMR_HSR1     50S ribosome-binding GTPase
  ------ inclusion threshold ------
      0.015   14.7   0.0        6.2    6.2   0.1    2.4  3  TniB         Bacterial TniB protein
      0.024   14.4   0.7        0.1   12.3   0.7    1.9  1  PduV-EutP    Ethanolamine utilisation - propanediol utilisati
      0.031   13.4   0.2      0.031   13.4   0.2    2.6  3  G-alpha      G-protein alpha subunit
       0.05   13.1   1.9      0.072   12.6   0.2    2.0  2  AAA_7        P-loop containing dynein motor region
        0.1   12.2   0.1       0.72    9.5   0.0    1.9  2  ATP-synt_ab  ATP synthase alpha/beta family, nucleotide-bindi


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.3   0.4   3.1e-37   4.7e-34       1     160 [.      12     175 ..      12     177 .. 0.93

  Alignments for each domain:
  == domain 1  score: 117.3 bits;  conditional E-value: 3.1e-37
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeikr 99 
                 K+ ++Gds++GKtsl++ +v+++F+ee+++T+gv+f++k+i++++++++++iwD  Gq ef ++ +++ +da +il ++d++++++++++k+w+++ + 
  EPX74781.1  12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTDITFSIWDLGGQREFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARG 110
                 6779**********************************************************************************************9 PP

                 HSTTTSEEEEEEETTTGGG......G-SS-HHHHHHHHHHHTSEEEEEBTTTTCTHHHHHHHHHHHH CS
         Ras 100 vaeenvpivLvGnKvDlee......kravsteegeelakelglkfletSAktnenveeafeellrei 160
                   ++  + +L+G+K D         +++++ ++++++ak +++  + +S  ++ nv+++f+ +l ++
  EPX74781.1 111 FNKT-AVPILIGTKYDHFMkfpredQEEIT-KQARRYAKAMKASLIFCSTSHSINVQKIFKIVLAKV 175
                 9996.77789******87667888677776.56899************************9998876 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.6   0.1   5.3e-29   7.8e-26       1     119 [.      12     125 ..      12     126 .. 0.91
   2 ?   -2.6   0.0         4   5.9e+03      66      95 ..     135     164 ..     134     174 .. 0.63

  Alignments for each domain:
  == domain 1  score: 90.6 bits;  conditional E-value: 5.3e-29
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE.GHHH..HCHH CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd.srss..enlk 96 
                 Kv ++Gds++GKtsl+  +v+++f+e++++t+gv+f++k++ +i++       ++++++iWD++Gq +f ++ p+ +++a ++++++d sr+s  +++k
  EPX74781.1  12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTI-SIRN-------TDITFSIWDLGGQREFVNMLPMVCNDAVAILFMFDlSRKStlNSIK 102
                 899***********************************998.4543.......4699*******************************8444323789* PP

                 HHHHHHHHHCSSS-EEEEEE-TT CS
         Roc  97 eWlkelkkvagkspvilvgnkiD 119
                 eW+++ +  +++++ il+g+k+D
  EPX74781.1 103 EWYRQARGFNKTAVPILIGTKYD 125
                 *********************99 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 4
                 GGCTTTT-HHHHCTSCEEEEEEEGHHHHCH CS
         Roc  66 qerfrslhplylreaalailvydsrssenl 95 
                 qe++ + ++ y ++ ++ ++++ +++s n+
  EPX74781.1 135 QEEITKQARRYAKAMKASLIFCSTSHSINV 164
                 566666666677777776666665555454 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.7   0.2   1.6e-11   2.3e-08       9     139 ..       5     138 ..       1     175 [. 0.71

  Alignments for each domain:
  == domain 1  score: 33.7 bits;  conditional E-value: 1.6e-11
                 TT.TTEEEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSSEEE..EEEEE..TTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHH CS
         Arf   9 klkkkelrilllGLDnaGKtTilkklkleelvt.tvPTigfnv..eelei..knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeake 102
                 k+++  +++ ++G  + GKt ++  + ++++++  + T+g n   ++++i   +++f++wD+GGq++  ++     ++  a++f+ D + ++ l++ ke
  EPX74781.1   5 KKNNVTIKVGMIGDSSIGKTSLMVTYVQGSFDEeSTQTLGVNFmeKTISIrnTDITFSIWDLGGQREFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKE 103
                 5567789999***999***********99998756788887752256666435699***********************************99999887 PP

                 HHHHHCTSGCCTTSEEEEEEE-TTSTTSS-HHHHHHH CS
         Arf 103 eLkalleeeelkevallvlaNKqDlpealseeelrel 139
                   ++   +  +k+++ ++++ K D      +e+ +e+
  EPX74781.1 104 WYRQA--RGFNKTAVPILIGTKYDHFMKFPREDQEEI 138
                 66653..333344444445667776666655555444 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.9   0.7   1.1e-10   1.7e-07       2     158 ..      13     159 ..      12     188 .. 0.78

  Alignments for each domain:
  == domain 1  score: 30.9 bits;  conditional E-value: 1.1e-10
   Gtr1_RagA   2 vLLmGksgsGKts.mrsiiFdnylardtlrlgatidveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDvesreleedletlk 99 
                 v ++G s+ GKts m   +   +  + t++lg+    +  ++r +  +t+++wD+gGq++fv+         + ++  +++++fD +    +++l+++k
  EPX74781.1  13 VGMIGDSSIGKTSlMVTYVQGSFDEESTQTLGVNFMEKTISIR-NTDITFSIWDLGGQREFVNML-----PMVCNDAVAILFMFDLS---RKSTLNSIK 102
                 5589*********455677778888889999999998888886.6789**************996.....77888899********9...778899999 PP

   Gtr1_RagA 100 eilealrqyspeakvfvli.hKmDliqedereeifeerkeeireeieklekeeiqffaTS 158
                 e  +++r +++ a v +li  K D   +  re+ +ee++++ r+ ++ ++ + + f +TS
  EPX74781.1 103 EWYRQARGFNKTA-VPILIgTKYDHFMKFPRED-QEEITKQARRYAKAMKAS-LIFCSTS 159
                 9999999999877.6666647****98777766.567777777777777744.4444443 PP

>> DLIC  Dynein light intermediate chain (DLIC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.0   6.8e-05       0.1      27     127 ..      12     108 ..       3     118 .. 0.84
   2 !   11.3   0.1   7.6e-05      0.11     223     271 ..     136     184 ..     118     193 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 6.8e-05
        DLIC  27 svlvlGedgsGkttli.aklqGveeekkGrGleylyldvkdedrddltrlnvwildGdlyhkgllkfaleaeslkdtlvilvvdlsrPwtileslqkwa 124
                 +v ++G+++ Gkt+l+ + +qG  +e   + l   +++     r+     ++w l G     ++l    +        ++++ dlsr  ++l+s+++w 
  EPX74781.1  12 KVGMIGDSSIGKTSLMvTYVQGSFDEESTQTLGVNFMEKTISIRNTDITFSIWDLGGQREFVNMLPMVCNDA----VAILFMFDLSRK-STLNSIKEWY 105
                 46689*********973689***99999999999999999999998899***************99877653....568899999997.6789999998 PP

        DLIC 125 svl 127
                 +  
  EPX74781.1 106 RQA 108
                 755 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 7.6e-05
        DLIC 223 dfiqshirrfclqyGaallytsvkedknldllykylvhkiyglpfrtPa 271
                 + i +  rr+   + a+l++ s     n+  ++k +  k+++l+ ++P 
  EPX74781.1 136 EEITKQARRYAKAMKASLIFCSTSHSINVQKIFKIVLAKVFDLKCTIPE 184
                 5577889*************************************99996 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.3   2.8e-06    0.0042      52     190 ..      43     173 ..       8     177 .. 0.77

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 2.8e-06
                 HTSCSSCEEEEEETTCSSEEEEEEEESSSGGGHHHHHHHHHT-SEEEEEEETTTB.STHHHHHHHHHHHHTTTE..EEEEEESCGSTHHHHHHHHHHHH CS
    GTP_EFTU  52 rgiTiksaaisleketkkylinliDtPGHvdFskevirglrvlDgavlvvdaveG.vepqteevlrlalkegvp..iivfiNKmDrlkaelkeiveevk 147
                  g+    ++is+    ++ ++++ D  G ++F++      + +   ++++d ++    +  +e  r+a+  +    +i++ +K D+  +  +e +ee+ 
  EPX74781.1  43 LGVNFMEKTISIR--NTDITFSIWDLGGQREFVNMLPMVCNDAVAILFMFDLSRKsTLNSIKEWYRQARGFNKTavPILIGTKYDHFMKFPREDQEEIT 139
                 3334444555555..7888899************9999999999999999987552778889999*****9999899999******************* PP

                 HHHHHHHHHHHHHHHTTTTTEEEEEEBTTTTBTHHHHHHHHHH CS
    GTP_EFTU 148 qklsrkeeklekygekgekevpvvfgSalkgegvktllealve 190
                 ++        + y+     + +++f+S  +  +v+++++ +  
  EPX74781.1 140 KQA-------RRYAKAM--KASLIFCSTSHSINVQKIFKIVLA 173
                 888.......4444443..588*************99998865 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   5.6e-06    0.0083       1     103 [.      12     107 ..      12     174 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 5.6e-06
                 EEEEEESTTSSHHHHHHHHHTS..TEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHH.HHHHHHHHHHCTSEEEEEEETTTTCSHHHHHH CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltge..kaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseek.glgkaflaleeadlillvvdaseeklkpldee 96 
                 +v+ +G +  GK++L+ + ++     + +++ g+    +++ ++  +  + ++D+ G       e  ++   ++  ++a +il+++d+s++      ++
  EPX74781.1  12 KVGMIGDSSIGKTSLMVTYVQGsfDEESTQTLGVNFMEKTISIRNTDITFSIWDLGG-QR----EFvNMLPMVC--NDAVAILFMFDLSRK---STLNS 100
                 699****************9864556777777777666666676666889*******.32....2222222222..358889999998833...23355 PP

                 HHHHHHH CS
    MMR_HSR1  97 leellee 103
                 ++e+ ++
  EPX74781.1 101 IKEWYRQ 107
                 5555443 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.1    0.0041       6.2      37      62 ..      12      37 ..       1      51 [. 0.76
   2 ?   -2.2   0.0       1.6   2.3e+03     139     152 ..      69      82 ..      67      87 .. 0.87
   3 ?    6.0   0.0    0.0047         7      97     167 ..      93     163 ..      83     167 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0041
        TniB 37 nlllvGdsnnGKtmivekFarlhppe 62
                ++ ++Gds +GKt+++  + +   +e
  EPX74781.1 12 KVGMIGDSSIGKTSLMVTYVQGSFDE 37
                56799**********99998766554 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1.6
        TniB 139 qreflnalksLgne 152
                 qref+n+l + +n+
  EPX74781.1  69 QREFVNMLPMVCND 82 
                 89******999997 PP

  == domain 3  score: 6.0 bits;  conditional E-value: 0.0047
        TniB  97 plkararvskleqqvlrllrelkvrvLiiDEihnllagsarkqreflnalksLgnelkipivlvGteealr 167
                   k++ +  k  ++  r ++++ v +Li    +++++  +++q+e++ + ++    +k +++ + t + ++
  EPX74781.1  93 SRKSTLNSIKEWYRQARGFNKTAVPILIGTKYDHFMKFPREDQEEITKQARRYAKAMKASLIFCSTSHSIN 163
                 44444444455566679999******************************************999887776 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.7   6.9e-05       0.1       3     140 ..      12     170 ..      10     173 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 6.9e-05
   PduV-EutP   3 killiGkvgsGKttLtqalkgeelkYkktqa..iefsdevi...DtPGeyl.....enrklysalivtsaeadvialvqdateeesvfp..pgf..asv 87 
                 k+ +iG +  GKt+L+ +  + ++  ++tq+  ++f++++i    t   +       +r++ + l ++  +a  i ++ d ++++++ +  + +  a+ 
  EPX74781.1  12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTlgVNFMEKTIsirNTDITFSiwdlgGQREFVNMLPMVCNDAVAILFMFDLSRKSTLNSikEWYrqARG 110
                 6779*****************99*999999855699999983332333332222225899999999999999999999988776655441143322567 PP

   PduV-EutP  88 fnkeviGii..tkidla.....edeenie.aveelLksaGaekifevsavekegieellky 140
                 fnk  + i+  tk d       ed+e+i+ +++++ k++ a+ if  s+ +++++++++k 
  EPX74781.1 111 FNKTAVPILigTKYDHFmkfprEDQEEITkQARRYAKAMKASLIF-CSTSHSINVQKIFKI 170
                 999988765558988642222356666651555555566666666.588888999998875 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.1      0.15   2.2e+02      17      40 ..       4      27 ..       1      42 [. 0.73
   2 ?   13.4   0.2   2.1e-05     0.031     186     236 ..      40      93 ..      28     100 .. 0.83
   3 ?    0.6   0.1      0.17   2.5e+02     303     350 ..     122     171 ..      92     176 .. 0.55

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.15
                XXXE..EEEEEEEESTTSSHHHHH CS
     G-alpha 17 arkkkrevkllllGqseSGKsTil 40
                a+k++ ++k+ ++G s+ GK++++
  EPX74781.1  4 AKKNNVTIKVGMIGDSSIGKTSLM 27
                45556799*************995 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 2.1e-05
                 ----SEEEEEEEC...T-TEEEEEEEE-SSHHHHHGTCCCTTTECEEEEEEEGG CS
     G-alpha 186 lktvGisetkfev...dsklefrivdvgGqrserkkWvpffddvdaiiFlvsls 236
                 ++t+G++ ++  +   +++++f i+d+gGqr+  +    + +d+ ai+F+  ls
  EPX74781.1  40 TQTLGVNFMEKTIsirNTDITFSIWDLGGQREFVNMLPMVCNDAVAILFMFDLS 93 
                 6789998888888889779************7655544456*********9998 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.17
                 CHHHHHHHHHHHHHHCCCCCCESGGS..CEEEEEE-TT-HHHHHHHHHHH CS
     G-alpha 303 ndlesvlkylrnkFeeihkeksnnrr..kiythftsatdtkevqkviesv 350
                  ++++ +k+ r+  eei k+ ++  +  k    f s+  + +vqk+++ v
  EPX74781.1 122 TKYDHFMKFPREDQEEITKQARRYAKamKASLIFCSTSHSINVQKIFKIV 171
                 34666666666666666555543333113333355566666777777665 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.2   4.8e-05     0.072      35      77 ..      12      55 ..       5      66 .. 0.86
   2 ?   -1.0   0.1      0.73   1.1e+03      61      87 ..     147     173 ..     135     176 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 4.8e-05
       AAA_7 35 pvllvGptGtGKtviikd.llkkldkekylsltinfsaqtsanq 77
                +v ++G++  GKt+++ + +  ++d+e++++l +nf  +t + +
  EPX74781.1 12 KVGMIGDSSIGKTSLMVTyVQGSFDEESTQTLGVNFMEKTISIR 55
                67799*************788899*************9998765 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.73
       AAA_7  61 kylsltinfsaqtsanqlqdiieskle 87 
                 k + +++ f ++ ++ ++q+i++  l 
  EPX74781.1 147 KAMKASLIFCSTSHSINVQKIFKIVLA 173
                 556667777777777777777765554 PP

>> ATP-synt_ab  ATP synthase alpha/beta family, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.24   3.6e+02      16      37 ..      12      33 ..      10      57 .. 0.81
   2 ?    9.5   0.0   0.00048      0.72       1      92 [.      68     172 ..      68     176 .. 0.87

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.24
                 EEEEEESTTSSHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab 16 rtlipgafgvGktvisqslskq 37
                 +++++g++ +Gkt ++ + ++ 
   EPX74781.1 12 KVGMIGDSSIGKTSLMVTYVQG 33
                 6789999******999665554 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00048
                  SSHHHHHHS-EBTT-EEEEEESTTSSHHHHHHHHHHHSSTS....SEEEEEEESEEHHHHHHHHHHCHH.........SSGGGGEEEEEEETTS-HHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab   1 GirvlDalfpivqGqrtlipgafgvGktvisqslskqsnsd....daiiyvgiGergnevaevleefpe.........gtimkrtvlvantsnepvaa 85 
                  G+r    ++p+v    ++i+  f + ++  ++s+ ++ +++    ++ + ++iG + +   ++ +e +e         +++mk + ++++ts +  ++
   EPX74781.1  68 GQREFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQArgfnKTAVPILIGTKYDHFMKFPREDQEeitkqarryAKAMKASLIFCSTSHSINVQ 165
                  566666799999999999999******99999999998777898559****************99999999988877667************999988 PP

                  HHHHHHH CS
                  xxxxxxx RF
  ATP-synt_ab  86 reasiyt 92 
                  ++  i++
   EPX74781.1 166 KIFKIVL 172
                  8877766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       731  (0.0407719); expected 358.6 (0.02)
Passed bias filter:                      557  (0.031067); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.50u 0.30s 00:00:00.80 Elapsed: 00:00:00.46
# Mc/sec: 1303.99
//
Query:       EPX74782.1  [L=1218]
Description: hypothetical protein SOCG_02264 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.6e-37  126.7   0.3    7.6e-37  126.7   0.3    4.4  5  TIP120          TATA-binding protein interacting (TIP20)
    1.6e-12   47.6   1.8    3.3e-05   24.2   0.0    5.9  5  HEAT_2          HEAT repeats
    3.1e-07   30.1   4.1       0.37   11.2   0.0    7.3  7  HEAT            HEAT repeat
    2.3e-05   24.5  11.4    0.00037   20.6   0.2    5.8  6  RTP1_C1         Required for nuclear transport of RNA pol II 
    0.00011   22.7   0.2         37    5.0   0.0    6.7  7  HEAT_EZ         HEAT-like repeat
    0.00022   21.3  13.5       0.12   12.4   0.1    6.1  6  Cnd1            non-SMC mitotic condensation complex subunit 
    0.00042   20.3   0.5        2.8    8.1   0.0    3.9  3  Arm             Armadillo/beta-catenin-like repeat
  ------ inclusion threshold ------
       0.15   12.2   8.6        1.2    9.3   0.1    4.7  4  V-ATPase_H_C    V-ATPase subunit H
        2.3    8.7  13.0        8.2    6.9   0.1    6.2  6  Telomere_reg-2  Telomere length regulation protein


Domain annotation for each model (and alignments):
>> TIP120  TATA-binding protein interacting (TIP20)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.26   5.2e+02      62     112 ..      43      95 ..      29     102 .. 0.72
   2 ?   -2.2   0.1       1.6   3.2e+03      67     119 ..     262     317 ..     249     333 .. 0.65
   3 ?   -0.3   0.0      0.39   7.9e+02      37      88 ..     346     400 ..     341     406 .. 0.78
   4 ?   -0.7   0.0      0.53   1.1e+03      40     119 ..     829     924 ..     827     929 .. 0.67
   5 !  126.7   0.3   3.8e-40   7.6e-37       2     153 ..    1035    1186 ..    1034    1204 .. 0.94

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.26
      TIP120  62 dlselldrvlaGlsDe.hdikllcnlmlsklvalapeevler.ldelvealrk 112
                 +  +++++++++l+D   +++  + +++s +     +++le  +++l  +++k
  EPX74782.1  43 SSGDFIATLIQALKDPaPEVQQEAAQCVSLVSLKISDQTLEYvVEQLLVEYSK 95 
                 56789999*******999**999999998665544444444436666666655 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1.6
      TIP120  67 ldrvlaGlsDehd...ikllcnlmlsklvalapeevlerldelvealrktlskklk 119
                 l+ +l+ l+D++d      l + +ls lv++++  v +  ++l++ l++ ++  ++
  EPX74782.1 262 LTVILNLLKDDYDsfdTVQLLLNTLSLLVKCQNPIVENTCKDLINVLKEKIQFDPN 317
                 55566667766432225566666788888888888888888888888888776554 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.39
      TIP120  37 DdGLelRKaaYetlytlletaldrld..lselldrvlaGlsDe.hdikllcnlml 88 
                 D++  +R+ a  +  +++ ++++ l+  +++l + +l++l D  +++k+++   l
  EPX74782.1 346 DNAWLIRREAISVASSIVTSHVELLSvlWEDLGEYILKALCDReDNVKIFAIGFL 400
                 6666788888888888888877665544899***********9899999887655 PP

  == domain 4  score: -0.7 bits;  conditional E-value: 0.53
      TIP120  40 LelRKaaYetlytlletal.drldlselldrvlaGlsDe.hdikllcnlmlsklvalapeevler..............ldelvealrktlskklk 119
                 Le R+ ++ t+      +  dr    ++++ + + l+   ++i+  + + + +l+a ++  v++               l+++++ l+++ls++  
  EPX74782.1 829 LEKRRKIFSTCFVASLVCSdDRQTAGSYFQALTNQLNSPnEEITQAAAVGVGRLAAKDELFVQTLctlydsdayprellLTSFTNVLKNQLSAETA 924
                 677888887766555555426677888999999999777699999999999999997754444445566666666555555666666666665554 PP

  == domain 5  score: 126.7 bits;  conditional E-value: 3.8e-40
      TIP120    2 ilpllsqllplvyketkvkkelireVqmGPFkhkvDdGLelRKaaYetlytlletaldrldlselldrvlaGlsDehdikllcnlmlsklvalapee 98  
                  i+++  +l++++y++++v+++ ir+VqmGPF+hkvDd L  R++++e++y+lle   +r ++  +++    Gl+De+ i+ll+  +l kl+++ p++
  EPX74782.1 1035 IEEIFTDLISALYSKSSVDPDSIRTVQMGPFQHKVDDCLLHRQLVFEIVYSLLEFPESRNNIDLFMQITTMGLKDEQYINLLSISILEKLIEIGPSD 1131
                  7889999************************************************888888888888899*************************** PP

      TIP120   99 vlerldelvealrktlskklkekavkqelEkqeelkrsvlrvvaalnsklesaev 153 
                  v +rld + e+l+ +l+k+ +ek+ k++ ++ ++l r++lrvv +l++k ++ ev
  EPX74782.1 1132 VFQRLDYVLEPLKDILKKQSNEKSLKTDSDNIHDLVRAALRVVISLKAKYNNPEV 1186
                  **********************************************999888775 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.0   1.6e-08   3.3e-05       3      66 ..       5      84 ..       3     124 .. 0.76
   2 ?   -2.1   0.0       2.5   5.1e+03      42      56 ..     346     360 ..     342     376 .. 0.62
   3 ?    2.0   0.0      0.14   2.8e+02      43      69 ..     629     656 ..     613     660 .. 0.63
   4 !   10.0   0.0   0.00045      0.89      32      76 ..     856     902 ..     843     908 .. 0.84
   5 ?    4.4   0.0     0.024        48       3      59 ..     963    1029 ..     961    1054 .. 0.69

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 1.6e-08
      HEAT_2  3 aLlqalendpdpevrraairaLg.rignp............ealpaLvellededpavRraaaeaLgaig...dpealpa 66
                +Llq   +++d+++r++a+  Lg +i ++            + +++L+++l+d+ p+v+++aa+  + +    ++++l+ 
  EPX74782.1  5 KLLQKYLQSSDKDLRYMALSDLGnKITSEkrsniaevfssgDFIATLIQALKDPAPEVQQEAAQCVSLVSlkiSDQTLEY 84
                45555559***************73333355556666666677********************97765541133445544 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 2.5
      HEAT_2  42 dedpavRraaaeaLg 56 
                 d  + +Rr+a+  ++
  EPX74782.1 346 DNAWLIRREAISVAS 360
                 344666666666555 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.14
      HEAT_2  43 edpavRraaaeaLgaig.dpealpaLke 69 
                 +++ +R +aa+aL++i  + e+l++L+e
  EPX74782.1 629 DEEPTRIQAANALAEIFlRTESLNLLRE 656
                 4555677777777766413556666655 PP

  == domain 4  score: 10.0 bits;  conditional E-value: 0.00045
      HEAT_2  32 alpaLvellededpavRraaaeaLgaig..dpealpaLkellddddd 76 
                 +++aL++ l+++++++ +aaa   g+++  d+ +++ L+ l+d+d  
  EPX74782.1 856 YFQALTNQLNSPNEEITQAAAVGVGRLAakDELFVQTLCTLYDSDAY 902
                 5789*********************9963267799*****9988754 PP

  == domain 5  score: 4.4 bits;  conditional E-value: 0.024
      HEAT_2    3 aLlqalendpdpevrraairaLg.........rignp.ealpaLvellededpavRraaaeaL.gaig 59  
                  +Ll++  + +  e++ +a+  L          +++ + +++  + +l++d+d +vR++a + L  ai+
  EPX74782.1  963 KLLELS-TKETSELKMQALSILRfslsyhhrkWCNAQkTTFFSVYKLINDSDVHVREEALQLLlTAIR 1029
                  566644.7777888888888888887444433332223557778889999999999999985535554 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.61   1.2e+03       4      21 ..       6      23 ..       5      24 .. 0.91
   2 !   11.2   0.0   0.00019      0.37       3      25 ..      49      71 ..      47      74 .. 0.89
   3 ?   -3.2   0.0       7.5   1.5e+04      11      21 ..     346     356 ..     345     358 .. 0.83
   4 ?    2.9   0.0     0.084   1.7e+02       4      30 ..     380     406 ..     377     407 .. 0.88
   5 ?   -0.1   0.0      0.78   1.6e+03      11      27 ..     629     644 ..     621     646 .. 0.80
   6 ?    1.7   0.0      0.21   4.2e+02       4      28 ..     859     883 ..     857     885 .. 0.87
   7 !    6.0   0.0    0.0083        16       6      24 ..    1006    1024 ..    1004    1028 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.61
                HHHHHHT-SSHHHHHHHH CS
        HEAT  4 lllkllsDpspeVReaAa 21
                ll+k l++++ + R++A+
  EPX74782.1  6 LLQKYLQSSDKDLRYMAL 23
                799************997 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00019
                HHHHHHHT-SSHHHHHHHHHHHH CS
        HEAT  3 PlllkllsDpspeVReaAakaLg 25
                 +l+++l+Dp+peV + Aa+++ 
  EPX74782.1 49 ATLIQALKDPAPEVQQEAAQCVS 71
                57999****************85 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 7.5
                 -SSHHHHHHHH CS
        HEAT  11 DpspeVReaAa 21 
                 D+++ +R+ A+
  EPX74782.1 346 DNAWLIRREAI 356
                 999***99886 PP

  == domain 4  score: 2.9 bits;  conditional E-value: 0.084
                 HHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   4 lllkllsDpspeVReaAakaLgalaev 30 
                  +lk+l+D + +V   A+  L  ++e+
  EPX74782.1 380 YILKALCDREDNVKIFAIGFLELFCEQ 406
                 699*************99999888875 PP

  == domain 5  score: -0.1 bits;  conditional E-value: 0.78
                 -SSHHHHHHHHHHHHHH CS
        HEAT  11 DpspeVReaAakaLgal 27 
                 D++p  R  Aa+aL+++
  EPX74782.1 629 DEEPT-RIQAANALAEI 644
                 77777.********998 PP

  == domain 6  score: 1.7 bits;  conditional E-value: 0.21
                 HHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAakaLgala 28 
                 +l + l++p+ e+ +aAa  +g+la
  EPX74782.1 859 ALTNQLNSPNEEITQAAAVGVGRLA 883
                 57889********999999999998 PP

  == domain 7  score: 6.0 bits;  conditional E-value: 0.0083
                  HHHHT-SSHHHHHHHHHHH CS
        HEAT    6 lkllsDpspeVReaAakaL 24  
                   kl++D++ +VRe A++ L
  EPX74782.1 1006 YKLINDSDVHVREEALQLL 1024
                  6899***********9987 PP

>> RTP1_C1  Required for nuclear transport of RNA pol II C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.7     0.011        22       6      85 ..       9      95 ..       5     143 .. 0.83
   2 ?   -0.4   0.0      0.65   1.3e+03      60      84 ..     193     217 ..     191     241 .. 0.79
   3 ?   -1.9   0.0       1.9   3.7e+03      34      73 ..     254     298 ..     219     321 .. 0.62
   4 ?   -2.4   0.0       2.6   5.2e+03      10      62 ..     346     398 ..     339     406 .. 0.63
   5 ?   -3.5   0.0       5.9   1.2e+04      59      83 ..     874     897 ..     847     920 .. 0.59
   6 !   20.6   0.2   1.9e-07   0.00037       4      97 ..    1005    1157 ..    1002    1161 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.011
     RTP1_C1  6 kdlqdpllpvrahglvlLrkliekkske...avldiekilkllleaLkdedsYvYLnaikgLvaLadvfpeevlklLleey....ee 85
                k+lq++   +r  +l+ L + i++++++   +v +    + +l++aLkd+ + v  +a ++++ +  ++++++l+ ++e+     ++
  EPX74782.1  9 KYLQSSDKDLRYMALSDLGNKITSEKRSniaEVFSSGDFIATLIQALKDPAPEVQQEAAQCVSLVSLKISDQTLEYVVEQLlveySK 95
                7899999***********999999987767777778889999*******************99888888888777777765322233 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.65
     RTP1_C1  60 aikgLvaLadvfpeevlklLleeye 84 
                 +i++++ L  + pe++l++Ll+  +
  EPX74782.1 193 SINCICILSMYGPEQCLNTLLNILK 217
                 79******************99873 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 1.9
     RTP1_C1  34 avldiekilkllleaLkde.dsY....vYLnaikgLvaLadvfpe 73 
                   ++++  l+++l+ Lkd+ ds+    + Ln  ++Lv+  + + e
  EPX74782.1 254 FSASAPGYLTVILNLLKDDyDSFdtvqLLLNTLSLLVKCQNPIVE 298
                 556677778888888875437764433344444444444444444 PP

  == domain 4  score: -2.4 bits;  conditional E-value: 2.6
     RTP1_C1  10 dpllpvrahglvlLrkliekkskeavldiekilkllleaLkdedsYvYLnaik 62 
                 d+   +r ++++  +++++++ +   + +e + + +l+aL d ++ v + ai 
  EPX74782.1 346 DNAWLIRREAISVASSIVTSHVELLSVLWEDLGEYILKALCDREDNVKIFAIG 398
                 55556666666666666666666666666677777777777766666555555 PP

  == domain 5  score: -3.5 bits;  conditional E-value: 5.9
     RTP1_C1  59 naikgLvaLadvfpeevlklLleey 83 
                 +a  g+  La + +e ++++L+  y
  EPX74782.1 874 AAAVGVGRLAAK-DELFVQTLCTLY 897
                 444455555554.355555666555 PP

  == domain 6  score: 20.6 bits;  conditional E-value: 1.9e-07
     RTP1_C1    4 alkdlqdpllpvrahglvlLrkliekkske.........................................................avldiekilk 43  
                  + k ++d+ ++vr ++l+lL + i++k k                                                          ++ +i+  ++
  EPX74782.1 1005 VYKLINDSDVHVREEALQLLLTAIRNKPKFieeiftdlisalyskssvdpdsirtvqmgpfqhkvddcllhrqlvfeivysllefpeSRNNIDLFMQ 1101
                  5789***********************977*************************************777777777777777766666666666666 PP

     RTP1_C1   44 llleaLkdedsYvYLnaikgLvaLadvfpeevlklLleey...eeenekeslderlk 97  
                  +    Lk +++Y+ L +i++L++L+++ p++v+++L       ++  +k+s ++ lk
  EPX74782.1 1102 ITTMGLK-DEQYINLLSISILEKLIEIGPSDVFQRLDYVLeplKDILKKQSNEKSLK 1157
                  6666665.589**********************998544466666666666666666 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       2.2   4.3e+03      33      54 ..       7      28 ..       5      28 .. 0.81
   2 ?    5.0   0.0     0.019        37      29      51 ..      47      69 ..      46      73 .. 0.86
   3 ?    0.8   0.0      0.36   7.2e+02       3      53 ..     351     401 ..     349     403 .. 0.70
   4 ?   -1.9   0.0       2.6   5.2e+03      17      38 ..     519     540 ..     511     542 .. 0.75
   5 ?    3.9   0.0     0.041        82      28      55 .]     619     644 ..     614     644 .. 0.89
   6 ?    2.2   0.0      0.14   2.8e+02      32      50 ..     859     878 ..     856     879 .. 0.91
   7 ?   -0.8   0.0       1.2   2.4e+03      36      52 ..    1008    1024 ..    1006    1024 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 2.2
     HEAT_EZ 33 LlalLnddsdeVRaaAagaLgn 54
                L + L++++++ R+ A+  Lgn
  EPX74782.1  7 LQKYLQSSDKDLRYMALSDLGN 28
                5566889999******998886 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.019
     HEAT_EZ 29 ilpaLlalLnddsdeVRaaAaga 51
                 ++ L+++L+d+ +eV++ Aa +
  EPX74782.1 47 FIATLIQALKDPAPEVQQEAAQC 69
                6899************8888877 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.36
     HEAT_EZ   3 vRraAawaLGrlaggepellqplvpeilpaLlalLnddsdeVRaaAagaLg 53 
                 +Rr A+++ +++     ell+ l +++  + l++L+d +d+V+  A+g L+
  EPX74782.1 351 IRREAISVASSIVTSHVELLSVLWEDLGEYILKALCDREDNVKIFAIGFLE 401
                 5566666555555555555666666677788999********999998775 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 2.6
     HEAT_EZ  17 gepellqplvpeilpaLlalLn 38 
                 + p +l++l+p i  +L++  +
  EPX74782.1 519 VKPVYLEKLQPLITSLLISSSQ 540
                 5688999999999999995554 PP

  == domain 5  score: 3.9 bits;  conditional E-value: 0.041
     HEAT_EZ  28 eilpaLlalLnddsdeVRaaAagaLgnl 55 
                  ++  L++ L  d+ ++R +Aa aL+ +
  EPX74782.1 619 SVITVLANKL--DEEPTRIQAANALAEI 644
                 68999*****..*************876 PP

  == domain 6  score: 2.2 bits;  conditional E-value: 0.14
     HEAT_EZ  32 aLlalLnddsdeV.RaaAag 50 
                 aL + Ln+++ e+ +aaA+g
  EPX74782.1 859 ALTNQLNSPNEEItQAAAVG 878
                 799********999***997 PP

  == domain 7  score: -0.8 bits;  conditional E-value: 1.2
     HEAT_EZ   36 lLnddsdeVRaaAagaL 52  
                  l nd++ +VR+ A+  L
  EPX74782.1 1008 LINDSDVHVREEALQLL 1024
                  5566666****999876 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.1   0.00079       1.6      23      88 ..      48     111 ..      38     149 .. 0.54
   2 ?   -3.1   0.1       3.6   7.2e+03      60     104 ..     283     308 ..     262     319 .. 0.46
   3 ?    2.2   0.0     0.086   1.7e+02      26      87 ..     340     405 ..     337     527 .. 0.81
   4 ?   -1.2   0.3      0.91   1.8e+03      73     111 ..     592     641 ..     588     714 .. 0.54
   5 ?    1.7   0.0      0.12   2.4e+02      16      54 ..     850     888 ..     837     937 .. 0.70
   6 !   12.4   0.1     6e-05      0.12      50     107 ..     991    1049 ..     971    1103 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00079
        Cnd1  23 vepLrkrLkDedpyVRktaaivvakLilndmvkekgflselaklleDenprVvanalaalteisek 88 
                 +  L ++LkD+ p V++ aa +v+ + l+  + ++ +   +++ll + +++  +n +aal  i+++
  EPX74782.1  48 IATLIQALKDPAPEVQQEAAQCVSLVSLK--ISDQTLEYVVEQLLVEYSKSYEKNYIAALWMILSR 111
                 34455666666666666666666644222..33333334444444444444444444444444444 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 3.6
        Cnd1  60 lselaklleDenprVvanalaalteiseksenaiynllpdiiskl 104
                 l++l  l++ +np V +                     +d+i+ l
  EPX74782.1 283 LNTLSLLVKCQNPIVENT-------------------CKDLINVL 308
                 222222222222222222...................23333333 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.086
        Cnd1  26 LrkrLkDedpyVRktaaivvakLilnd....mvkekgflselaklleDenprVvanalaalteise 87 
                 +++  +D+   +R+ a+ v + +++       v ++++ + ++k+l+D +++V   a+ +l+   e
  EPX74782.1 340 MYEDEEDNAWLIRREAISVASSIVTSHvellSVLWEDLGEYILKALCDREDNVKIFAIGFLELFCE 405
                 566667888889999999999994443233358899999999999999999999999988875554 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 0.91
        Cnd1  73 rVvanalaalteisek.senaiynllpdiisklsdalne..........c 111
                 r++++ + +lt++     +n+  + l ++i  l ++l+e          +
  EPX74782.1 592 RIRTSLIEFLTKVVVYyHNNISTEFLYSVITVLANKLDEeptriqaanaL 641
                 55555566666655554444445555555555555443322222222220 PP

  == domain 5  score: 1.7 bits;  conditional E-value: 0.12
        Cnd1  16 pnlveylvepLrkrLkDedpyVRktaaivvakLilndmv 54 
                 +++   + + L+++L+ +++ + + aa++v +L  +d  
  EPX74782.1 850 RQTAGSYFQALTNQLNSPNEEITQAAAVGVGRLAAKDEL 888
                 555667788888899999999999999999888665533 PP

  == domain 6  score: 12.4 bits;  conditional E-value: 6e-05
        Cnd1   50 lndmvkekg.flselaklleDenprVvanalaalteiseksenaiynllpdiisklsda 107 
                  +++ +  ++  ++ ++kl++D++  V++ al +l    +++++ i +++ d+is l ++
  EPX74782.1  991 HRKWCNAQKtTFFSVYKLINDSDVHVREEALQLLLTAIRNKPKFIEEIFTDLISALYSK 1049
                  455677666699******************999988888888************99853 PP

>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.1     0.002       3.9      14      37 ..      48      71 ..      46      74 .. 0.90
   2 !    8.1   0.0    0.0014       2.8      15      41 .]     858     884 ..     846     884 .. 0.86
   3 ?   -1.2   0.0       1.2   2.5e+03      19      33 ..    1007    1021 ..    1006    1024 .. 0.89

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.002
                HHHHHHHTTTSSHHHHHHHHHHHH CS
         Arm 14 vppLvrLLssedeevqeeAawALs 37
                +  L++ L+++ +evq+eAa ++s
  EPX74782.1 48 IATLIQALKDPAPEVQQEAAQCVS 71
                5689****************8876 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.0014
                 HHHHHHTTTSSHHHHHHHHHHHHHHTT CS
         Arm  15 ppLvrLLssedeevqeeAawALsNLaa 41 
                 ++L + L+s++ee++++Aa  ++ Laa
  EPX74782.1 858 QALTNQLNSPNEEITQAAAVGVGRLAA 884
                 79999***************9999985 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 1.2
                  HHTTTSSHHHHHHHH CS
         Arm   19 rLLssedeevqeeAa 33  
                  +L+++ d+ v+eeA+
  EPX74782.1 1007 KLINDSDVHVREEAL 1021
                  69999*********7 PP

>> V-ATPase_H_C  V-ATPase subunit H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.1   0.00059       1.2      45     111 ..       5      72 ..       2      76 .. 0.79
   2 ?   -1.3   0.1       1.2   2.3e+03      32      75 ..     250     294 ..     245     315 .. 0.65
   3 ?    4.5   0.2     0.018        36      42     113 ..     959    1028 ..     950    1031 .. 0.65
   4 ?   -4.1   0.1       8.4   1.7e+04      44      73 ..    1140    1169 ..    1137    1183 .. 0.68

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00059
  V-ATPase_H_C  45 kkLiklleeskdktvlavalnDigelvkllp..egkkvleklkaKekimellehedeevkyeALkavqk 111
                   k L k+l +s+dk    +al+D+g+ ++  +  +  +v ++ +  +++++ l+++ +ev++eA ++v+ 
    EPX74782.1   5 KLLQKYL-QSSDKDLRYMALSDLGNKITSEKrsNIAEVFSSGDFIATLIQALKDPAPEVQQEAAQCVSL 72 
                   6688999.6999999**********998844224455566666677888888899***********985 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 1.2
  V-ATPase_H_C  32 naekleeknfkllkkLiklleeskdk.tvlavalnDigelvkllp 75 
                   ++ k+  +    l  +++ll+++ d+  +++++ln ++ lvk  +
    EPX74782.1 250 HSIKFSASAPGYLTVILNLLKDDYDSfDTVQLLLNTLSLLVKCQN 294
                   556676676777788888886666655888888888888888743 PP

  == domain 3  score: 4.5 bits;  conditional E-value: 0.018
  V-ATPase_H_C   42 kllkkLiklleeskdktvlavalnDigelvkllpegkkvleklkaKekimellehedeevkyeALkavqkll 113 
                    +l  kL++l +  k+++ l + +  i ++   +++ k   ++  +   + +l++++d +v+ eAL+ + + +
    EPX74782.1  959 NLYPKLLELST--KETSELKMQALSILRFSLSYHHRKWCNAQKTTFFSVYKLINDSDVHVREEALQLLLTAI 1028
                    55555666552..33344555666666666665555555555555678999*************99776665 PP

  == domain 4  score: -4.1 bits;  conditional E-value: 8.4
  V-ATPase_H_C   44 lkkLiklleeskdktvlavalnDigelvkl 73  
                    l+ L+++l++++++++l     +i  lv+ 
    EPX74782.1 1140 LEPLKDILKKQSNEKSLKTDSDNIHDLVRA 1169
                    566788887777777777777667666665 PP

>> Telomere_reg-2  Telomere length regulation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1       1.7   3.4e+03      44      88 ..      47      89 ..       7     105 .. 0.48
   2 ?    6.9   0.1    0.0041       8.2       1      49 [.     259     308 ..     259     318 .. 0.91
   3 ?   -3.8   0.0       8.7   1.7e+04      21      49 ..     353     381 ..     343     393 .. 0.65
   4 ?    1.6   0.1      0.19   3.8e+02      25      76 ..     466     517 ..     445     604 .. 0.71
   5 ?   -1.9   0.3       2.3   4.6e+03       4      50 ..     617     666 ..     615     714 .. 0.68
   6 ?    3.6   0.0     0.044        88      12      51 ..    1009    1048 ..    1001    1063 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.7
  Telomere_reg-2 44 eLataLltledkfdienfeelrlnalvallvatpekvaeylteef 88
                     +at + +l+d    +++++   +++  +  +   ++ ey++e++
      EPX74782.1 47 FIATLIQALKDP--APEVQQEAAQCVSLVSLKISDQTLEYVVEQL 89
                    233333334444..3333333333333333333444555555554 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0041
  Telomere_reg-2   1 pvYlkdllelLrdk.ddyekieaaLksaeeLirrkadeveenaveLataL 49 
                     p Yl  +l+lL+d+ d+ + +++ L++++ L++ +++ ve+ +++L+++L
      EPX74782.1 259 PGYLTVILNLLKDDyDSFDTVQLLLNTLSLLVKCQNPIVENTCKDLINVL 308
                     56999999****888******************99999999999999987 PP

  == domain 3  score: -3.8 bits;  conditional E-value: 8.7
  Telomere_reg-2  21 eaaLksaeeLirrkadeveenaveLataL 49 
                     ++a+++a++++ ++ + ++ ++++L + +
      EPX74782.1 353 REAISVASSIVTSHVELLSVLWEDLGEYI 381
                     56777777777777775555555554444 PP

  == domain 4  score: 1.6 bits;  conditional E-value: 0.19
  Telomere_reg-2  25 ksaeeLirrkadeveenaveLataLltledkfdienfeelrlnalvallvat 76 
                     + a+++ r+ +d+++++   L+++L + ++ +++e   +l +  lv+ +v++
      EPX74782.1 466 NLASQIFRAVPDKLDNHFIGLMSILDSFQNYTTLELRLKLDIVNLVSAIVSS 517
                     4556666667778888888888888888888777766666666666555544 PP

  == domain 5  score: -1.9 bits;  conditional E-value: 2.3
  Telomere_reg-2   4 lkdllelLrdk..ddyekieaaLksaeeLirrkad.eveenaveLataLl 50 
                     l  ++++L +k  +++ +i+aa   ae  +r ++   ++en   +++ +l
      EPX74782.1 617 LYSVITVLANKldEEPTRIQAANALAEIFLRTESLnLLRENHTTMLQKIL 666
                     66677777755435567777777777777775554466664444444333 PP

  == domain 6  score: 3.6 bits;  conditional E-value: 0.044
  Telomere_reg-2   12 rdkddyekieaaLksaeeLirrkadeveenaveLataLlt 51  
                       +++d +  e+aL+ + + ir+k++ +ee+  +L++aL +
      EPX74782.1 1009 INDSDVHVREEALQLLLTAIRNKPKFIEEIFTDLISALYS 1048
                      355677899****************999*******99976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1218 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       798  (0.0445089); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.84u 0.29s 00:00:01.12 Elapsed: 00:00:00.46
# Mc/sec: 8000.05
//
Query:       EPX74783.1  [L=809]
Description: AAA family ATPase Cdc48 [Schizosaccharomyces octosporus yFS286]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      2e-98  326.0   0.0    1.3e-48  164.7   0.0    2.5  2  AAA              ATPase family associated with various cellul
    4.8e-24   83.9   4.8      1e-12   47.6   0.5    2.8  2  AAA_lid_3        AAA+ lid domain
    9.2e-19   67.4   0.8    2.8e-18   65.8   0.8    1.9  1  CDC48_N          Cell division protein 48 (CDC48), N-terminal
    1.9e-14   54.2   0.0    1.1e-07   32.2   0.0    2.8  2  AAA_2            AAA domain (Cdc48 subfamily)
    4.8e-14   52.4   0.0    6.6e-06   26.0   0.0    3.2  2  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    2.1e-11   44.2   0.1    2.1e-05   24.7   0.0    3.1  2  AAA_33           AAA domain
    6.8e-11   42.8   0.1     0.0021   18.5   0.0    4.6  3  AAA_16           AAA ATPase domain
    6.9e-11   42.3   1.3    2.9e-05   24.1   0.1    4.7  2  AAA_5            AAA domain (dynein-related subfamily)
    6.1e-09   36.3   3.1      0.057   13.7   0.0    5.1  4  AAA_22           AAA domain
    6.7e-09   35.4   2.5     0.0013   18.0   0.0    2.9  2  TIP49            TIP49 P-loop domain
    1.9e-08   34.0   0.0    6.1e-08   32.3   0.0    1.9  1  CDC48_2          Cell division protein 48 (CDC48), domain 2
    1.4e-07   31.4   0.0     0.0056   16.4   0.0    2.8  2  IstB_IS21        IstB-like ATP binding protein
      2e-07   30.6   0.4      0.023   14.1   0.0    2.8  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
    3.4e-07   30.9   0.0      0.017   15.7   0.0    3.0  2  AAA_18           AAA domain
    9.1e-07   29.2   0.0      0.043   14.2   0.0    2.9  2  RNA_helicase     RNA helicase
    1.9e-06   28.0   0.0      0.017   15.1   0.0    2.6  2  AAA_14           AAA domain
    1.9e-06   27.4   0.4       0.51    9.6   0.0    3.8  3  ATPase           KaiC
    3.3e-06   26.7   0.1      0.024   14.1   0.0    3.0  2  AAA_7            P-loop containing dynein motor region
    7.8e-06   25.2   0.1      0.036   13.1   0.0    2.5  2  Parvo_NS1        Parvovirus non-structural protein NS1
    1.4e-05   25.4   0.1       0.17   12.1   0.0    3.1  3  AAA_28           AAA domain
    1.5e-05   25.5   0.0       0.11   13.0   0.0    3.9  2  ABC_tran         ABC transporter
      2e-05   24.3   0.0       0.49   10.1   0.0    3.5  2  Sigma54_activat  Sigma-54 interaction domain
    5.4e-05   22.5   0.0      0.036   13.2   0.0    2.8  2  DUF815           Protein of unknown function (DUF815)
    7.6e-05   22.5   0.0       0.13   12.0   0.0    2.7  2  AAA_24           AAA domain
    0.00011   21.8   0.3        0.3   10.5   0.0    2.5  2  PhoH             PhoH-like protein
    0.00012   21.8   6.4        2.6    7.6   0.0    4.7  5  AAA_25           AAA domain
    0.00012   21.9   0.1        1.3    8.7   0.0    3.2  3  AAA_11           AAA domain
     0.0002   21.4   0.1      0.078   13.0   0.0    2.7  2  ResIII           Type III restriction enzyme, res subunit
    0.00021   21.3   0.0       0.42   10.6   0.0    2.4  2  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
    0.00028   20.8   0.3      0.006   16.5   0.1    2.7  2  Vps4_C           Vps4 C terminal oligomerisation domain
    0.00051   19.9   0.0        1.1    9.2   0.0    2.6  2  AAA_3            ATPase family associated with various cellul
    0.00051   20.5   3.0       0.59   10.6   0.0    3.9  4  AAA_17           AAA domain
    0.00056   19.2   0.0       0.89    8.7   0.0    2.4  2  DUF2075          Uncharacterized conserved protein (DUF2075)
    0.00068   19.5   0.0       0.67    9.8   0.0    2.7  2  Bac_DnaA         Bacterial dnaA  protein
     0.0025   17.8   0.1        2.1    8.2   0.0    3.6  2  ATPase_2         ATPase domain predominantly from Archaea
     0.0038   17.0   0.0       0.54   10.0   0.0    2.9  3  Viral_helicase1  Viral (Superfamily 1) RNA helicase
     0.0041   16.9   0.6        3.8    7.2   0.1    2.7  2  AAA_30           AAA domain
     0.0044   17.1   0.0        3.7    7.6   0.0    3.0  2  Sigma54_activ_2  Sigma-54 interaction domain
     0.0055   16.6   0.1        3.7    7.4   0.0    3.0  3  NACHT            NACHT domain
     0.0083   16.5   1.3        4.5    7.6   0.0    3.2  2  AAA_19           AAA domain
  ------ inclusion threshold ------
      0.014   14.8   0.1        2.3    7.5   0.0    2.3  2  IPT              Isopentenyl transferase
      0.015   15.2   1.1        4.2    7.2   0.0    4.1  4  NTPase_1         NTPase
      0.018   14.4   0.0          6    6.1   0.0    2.7  2  Zeta_toxin       Zeta toxin
      0.022   14.0   0.0       0.77    8.9   0.0    2.7  2  KAP_NTPase       KAP family P-loop domain
      0.022   13.9   0.0        3.7    6.7   0.0    2.4  2  NB-ARC           NB-ARC domain
      0.023   14.7   0.1      0.059   13.4   0.1    1.6  1  Molydop_binding  Molydopterin dinucleotide binding domain
      0.037   13.1   0.0        1.6    7.7   0.0    2.4  2  T2SSE            Type II/IV secretion system protein
      0.042   13.7   1.0       0.33   10.8   1.2    2.4  2  eIF-1a           Translation initiation factor 1A / IF-1
       0.11   12.2   0.0          2    8.0   0.0    3.0  3  Zot              Zonular occludens toxin (Zot)


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.7   0.0   2.6e-49   9.5e-47       1     130 [.     255     383 ..     255     385 .. 0.97
   2 !  164.7   0.0   3.6e-51   1.3e-48       1     132 []     528     660 ..     528     660 .. 0.97

  Alignments for each domain:
  == domain 1  score: 158.7 bits;  conditional E-value: 2.6e-49
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTS CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkk 99 
                 +l+yGppGtGKTl+a+ava+e+g+ f+ i+g+e++sk+ gese+++r+ f+ea++++ p i+fiDEid++a++r++++ e+e+rvv+qLlt +dg+k +
  EPX74783.1 255 ILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNS-PAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKAR 352
                 69******************************************************9.****************************************7 PP

                 SSTEEEEEEESSGGGSTHHHHS.TTSSEEEET CS
         AAA 100 eskvivigatnrpdkldpallr.gRfdrkiei 130
                  s+++v++atnrp+++dpal+r gRfdr++ +
  EPX74783.1 353 -SNIVVMAATNRPNSIDPALRRfGRFDREVDV 383
                 .66*************************9987 PP

  == domain 2  score: 164.7 bits;  conditional E-value: 3.6e-51
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHH..TTCCCHHHHHHHHHHHHHHHHTT CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr..sgseseeeervvnqLlteldgvk 97 
                 vl++GppGtGKTllaka+a+e++++f++++g+ells+++gese+++r++f++a++ a p+++f+DE+d++aksr  + ++s+ ++rvvnqLlte+dgv+
  EPX74783.1 528 VLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAA-PCVVFLDELDSIAKSRgaTAGDSGGGDRVVNQLLTEMDGVN 625
                 79******************************************************9.****************988889******************* PP

                 TSSSTEEEEEEESSGGGSTHHHHS.TTSSEEEETTS CS
         AAA  98 kkeskvivigatnrpdkldpallr.gRfdrkieiel 132
                 +k++ v+vigatnrpd++dpal+r gR+d+ i+++l
  EPX74783.1 626 SKKN-VFVIGATNRPDQIDPALMRpGRLDQLIYVPL 660
                 *755.***************************9985 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.6   0.5   2.9e-15     1e-12       1      41 [.     407     447 ..     407     453 .. 0.92
   2 !   37.3   0.3   4.6e-12   1.7e-09       1      42 [.     682     724 ..     682     728 .. 0.95

  Alignments for each domain:
  == domain 1  score: 47.6 bits;  conditional E-value: 2.9e-15
   AAA_lid_3   1 dvdlkeLAerTeGySGADlaalcreAallAlrrgikeitme 41 
                 dvdl+++A +T+Gy+G Dla+lc eAa+  +r++++ i+ +
  EPX74783.1 407 DVDLEQIAGETHGYVGSDLASLCSEAAMQQIREKMDLIDLD 447
                 9***********************************98744 PP

  == domain 2  score: 37.3 bits;  conditional E-value: 4.6e-12
   AAA_lid_3   1 dvdlkeLAerTeGySGADlaalcreAallAlrrgike.itmed 42 
                 dvdl ++A++T+G+SGADl+ ++++ + lA++++i+e i++e+
  EPX74783.1 682 DVDLRAVAKATHGFSGADLEFVVQRTVKLAIKESIEEdIKKEN 724
                 9***********************************9898876 PP

>> CDC48_N  Cell division protein 48 (CDC48), N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.8   0.8   7.8e-21   2.8e-18       2      84 ..      40     120 ..      39     122 .. 0.93

  Alignments for each domain:
  == domain 1  score: 65.8 bits;  conditional E-value: 7.8e-21
                 EEEECCS.S-CSSTTEEEE-HHHHHHHTS-TTSEEEEEC.CCC.EEEEEEEBSTTSTTTTEEEE-HHHHHHHT--TTEEEEEEEE- CS
     CDC48_N   2 LrVaeap.qedvgrgivridpedmeelglepgdvveieg.krk.TvaivwpaepedegkgiIrmdgvtRknagvsiGdkVtVrkae 84 
                 L+V++a  +   +++++ ++p++me l+l++gd+v ++g +rk Tv iv+++++   ++g  r+++v+R+n+++++Gd VtV ++ 
  EPX74783.1  40 LVVDDATnD---DNSVITLSPNTMETLQLFRGDTVVVKGkRRKdTVLIVLTDDDM--EDGAARLNRVVRNNLRIRLGDVVTVNPCP 120
                 89****977...***************************7777*********977..47************************996 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.2   0.0     3e-10   1.1e-07       6     108 ..     255     351 ..     250     362 .. 0.84
   2 !   18.9   0.0   3.6e-06    0.0013       6     105 ..     528     623 ..     523     630 .. 0.74

  Alignments for each domain:
  == domain 1  score: 32.2 bits;  conditional E-value: 3e-10
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTS..EEEEETGGG----.---------HHHHHHHHH CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG..ivllDEidKihpk.essgadvSregVqrdLLq 101
                 il+ gp g+Gkt++a+a+a+   +     +  ++  e++     +   +++   +++  +ae++   i+++DEid i+pk e+++ +v r  V+  LL 
  EPX74783.1 255 ILMYGPPGTGKTLMARAVANETGA----FFFLINGPEIMS----KMAGESESNLRKAFEEAEKNSpaIIFIDEIDSIAPKrEKTNGEVER-RVVSQLLT 344
                 899******************995....9***********....77777777777777777777778*************5555566655.6888999* PP

                 HHH--EE CS
       AAA_2 102 ileggtl 108
                 +++g ++
  EPX74783.1 345 LMDGMKA 351
                 ***9766 PP

  == domain 2  score: 18.9 bits;  conditional E-value: 3.6e-06
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG---..----THHHHHHHHHTTT-HHHHTTSEEEEETGGG----..---------HHHHHHHH CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselle..eeevehlvsrligappgyvgaeegGivllDEidKihpk..essgadvSregVqrdLL 100
                 +l+ gp g+Gkt+laka+a+  ++    ++i +   ell     e+e+ v     ++     a+   +v+lDE+d i+++   ++g    ++ V++ LL
  EPX74783.1 528 VLFFGPPGTGKTLLAKAIANECSA----NFISVKGPELLSmwFGESESNVRDIFDKAR----AAAPCVVFLDELDSIAKSrgATAGDSGGGDRVVNQLL 618
                 7999******************96....999999999999553444555544444433....34456************95434444444577999999 PP

                 HHHH- CS
       AAA_2 101 qileg 105
                   ++g
  EPX74783.1 619 TEMDG 623
                 88887 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.0   1.8e-08   6.6e-06      36     102 ..     255     329 ..     249     376 .. 0.77
   2 !   22.6   0.0   1.9e-07   7.1e-05      34      69 ..     526     561 ..     490     600 .. 0.79

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 1.8e-08
      RuvB_N  36 vllyGpPGlGkttlakiiakelgvklkitsgPvl......ekagdlaalltnleek..dvlfideihrlsravee 102
                 +l+yGpPG Gkt +a+ +a+e g+ +    gP +      e +++l   + + e++   ++fidei  ++++ e 
  EPX74783.1 255 ILMYGPPGTGKTLMARAVANETGAFFFLINGPEImskmagESESNLRKAFEEAEKNspAIIFIDEIDSIAPKREK 329
                 89******************************8833222223445666665555542259******999887665 PP

  == domain 2  score: 22.6 bits;  conditional E-value: 1.9e-07
      RuvB_N  34 dhvllyGpPGlGkttlakiiakelgvklkitsgPvl 69 
                   vl++GpPG Gkt lak ia+e  +++ +  gP l
  EPX74783.1 526 KGVLFFGPPGTGKTLLAKAIANECSANFISVKGPEL 561
                 569******************************987 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.0   5.8e-08   2.1e-05       2      82 ..     255     364 ..     255     418 .. 0.66
   2 !   16.0   0.0   2.9e-05     0.011       2      43 ..     528     571 ..     528     608 .. 0.72

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 5.8e-08
      AAA_33   2 vllvGlpGsGKstlaerllkklg..avllssdtlrrrlfgtdqqskt............................dytrvldrlyqilnelarkalsag 70 
                 +l+ G+pG+GK+  a+ +++++g  ++l++ ++++++++g+ + +++                               +v+ r+  +l  l  + ++a+
  EPX74783.1 255 ILMYGPPGTGKTLMARAVANETGafFFLINGPEIMSKMAGESESNLRkafeeaeknspaiifideidsiapkrekTNGEVERRVVSQLLTLM-DGMKAR 352
                 689*********************999************96555554445555555566666666666666553322234444444543444.345555 PP

      AAA_33  71 rnvildatnlsr 82 
                  n+++ a   ++
  EPX74783.1 353 SNIVVMAATNRP 364
                 555554444444 PP

  == domain 2  score: 16.0 bits;  conditional E-value: 2.9e-05
      AAA_33   2 vllvGlpGsGKstlaerllkklg..avllssdtlrrrlfgtdqq 43 
                 vl+ G+pG+GK+ la+ ++++    ++ +  ++l+++ fg+ + 
  EPX74783.1 528 VLFFGPPGTGKTLLAKAIANECSanFISVKGPELLSMWFGESES 571
                 799****************9999778888888888888884333 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   7.6e-05     0.028      21      51 ..     249     276 ..     224     294 .. 0.75
   2 ?    2.5   0.0      0.45   1.7e+02     123     164 ..     300     351 ..     285     358 .. 0.60
   3 !   18.5   0.0   5.8e-06    0.0021      25     124 ..     526     619 ..     516     633 .. 0.61

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 7.6e-05
      AAA_16  21 sgrpelvllsGesGvGKsslvrellralekd 51 
                    p+ +l +G++G+GK+ ++r++++   ++
  EPX74783.1 249 IKPPRGILMYGPPGTGKTLMARAVAN---ET 276
                 444599*****************996...33 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.45
      AAA_16 123 lkrllallsrderplvlvlDdlq...........wadeaslqllaaLlrlles 164
                 l+++++ +++  +p ++++D+++            ++    + l +L++ +++
  EPX74783.1 300 LRKAFEEAEK-NSPAIIFIDEIDsiapkrektngEVERRVVSQLLTLMDGMKA 351
                 4555566667.788*********555554444443333444444455555555 PP

  == domain 3  score: 18.5 bits;  conditional E-value: 5.8e-06
      AAA_16  25 elvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipysalaqalareellrqlldeaes.aeleawrekleealaavpelagaea...... 116
                   vl+ G++G+GK+ l+++++++ +++   f++ k  +l     +s+ +   ++ + +r++ d+a++ a    + ++l++ ++     +ga a      
  EPX74783.1 526 KGVLFFGPPGTGKTLLAKAIANECSAN---FISVKGPEL-----LSM-WFGESE-SNVRDIFDKARAaAPCVVFLDELDSIAK----SRGATAgdsggg 610
                 789*******************99999...999999999.....444.444423.6667777664330333333333333333....333333333355 PP

      AAA_16 117 .srllellk 124
                  + +++ll+
  EPX74783.1 611 dRVVNQLLT 619
                 344444444 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.1     8e-08   2.9e-05       2     136 ..     255     373 ..     254     375 .. 0.76
   2 !   12.7   0.1   0.00027     0.098       2      31 ..     528     557 ..     527     648 .. 0.82

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 8e-08
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------.....G-SEEEEESGGG--HHHHHHHHHHHHSSEEE CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar.....egeilvlDEveraesevlnsLlslleerrll 95 
                 +l+ GppGtgK+ +a+ +a  +++ ++ +++++ +++     + ++             +a++     +++i+++DE++ + ++  ++ +   e+r ++
  EPX74783.1 255 ILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNL------------RKAFEeaeknSPAIIFIDEIDSIAPKR-EKTNGEVERRVVS 340
                 79*******************************9987554444444............33333333789**********999875.5566777777766 PP

                 ..-SSSEEE---......-EEEEEESS--.-TT-TTHHHHT CS
       AAA_5  96 leeggelvkaknddllerfrviatanpldrslnelspalrs 136
                   ++ +l++  +  + +++ v+a++n+++    +++palr+
  EPX74783.1 341 --QLLTLMDGMK--ARSNIVVMAATNRPN----SIDPALRR 373
                 ..6666666655..334488999999888....99999986 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 0.00027
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvq 31 
                 vl  GppGtgK+ la+ +a    +++  v 
  EPX74783.1 528 VLFFGPPGTGKTLLAKAIANECSANFISVK 557
                 8999*************9987766666555 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0       1.3   4.7e+02      81     119 ..      26      77 ..       7      92 .. 0.67
   2 !   12.4   0.0    0.0004      0.15       8      29 ..     255     276 ..     250     291 .. 0.84
   3 ?    4.5   0.0       0.1        38      72     117 ..     294     347 ..     282     361 .. 0.73
   4 !   13.7   0.0   0.00016     0.057       9      29 ..     529     549 ..     524     636 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 1.3
      AAA_22  81 aleqalraravielliiDEaqhlr......seealeeLrsllnl.......s 119
                 + +  lr+++++  l++D+a + +      s++ +e+L  +  +       +
  EPX74783.1  26 TATAILRKKRKPNSLVVDDATNDDnsvitlSPNTMETLQLFRGDtvvvkgkR 77 
                 45566677777899******99877666555999999966644444445544 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 0.0004
      AAA_22   8 lvvtGesGtGKTtllrrlleql 29 
                 ++ +G++GtGKT+ +r ++++ 
  EPX74783.1 255 ILMYGPPGTGKTLMARAVANET 276
                 6789**************9986 PP

  == domain 3  score: 4.5 bits;  conditional E-value: 0.1
      AAA_22  72 rlsseellealeqalraravielliiDEaqhlr...s.......eealeeLrslln 117
                 + s++ l++a+e+a ++  +  ++ iDE++ +    +        +++++L +l++
  EPX74783.1 294 GESESNLRKAFEEAEKNSPA--IIFIDEIDSIApkrEktngeveRRVVSQLLTLMD 347
                 46788888999998888888..*********9876414555566666666666666 PP

  == domain 4  score: 13.7 bits;  conditional E-value: 0.00016
      AAA_22   9 vvtGesGtGKTtllrrlleql 29 
                 + +G++GtGKT+l++ ++++ 
  EPX74783.1 529 LFFGPPGTGKTLLAKAIANEC 549
                 679**************9985 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   3.6e-06    0.0013      51     108 ..     253     305 ..     243     359 .. 0.78
   2 !   16.5   0.0     1e-05    0.0038      50      96 ..     525     569 ..     513     580 .. 0.85

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 3.6e-06
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  51 ravLlaGpsgtGktalaiaiskelgedvpfvalsgsevyslevkktevltqalrksig 108
                 r++L+ Gp+gtGkt +a a+++e g    f  ++g e+ s     +e    +lrk+  
  EPX74783.1 253 RGILMYGPPGTGKTLMARAVANETG--AFFFLINGPEIMSKMAGESES---NLRKAFE 305
                 89*********************99..78999*******998888774...5555554 PP

  == domain 2  score: 16.5 bits;  conditional E-value: 1e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  50 GravLlaGpsgtGktalaiaiskelgedvpfvalsgsevyslevkkt 96 
                  ++vL+ Gp+gtGkt la ai++e +    f++++g e+ s+    +
  EPX74783.1 525 SKGVLFFGPPGTGKTLLAKAIANECS--ANFISVKGPELLSMWFGES 569
                 699*********************98..6899999999998766555 PP

>> CDC48_2  Cell division protein 48 (CDC48), domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.3   0.0   1.7e-10   6.1e-08    
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